Sequence Modifications Mass Mass Fractional Part Protein Groups Proteins Gene Names Protein Names Unique (Groups) Unique (Proteins) Acetyl (Protein N-term) Oxidation (M) Missed cleavages Identification type input_1 Identification type input_2 Identification type input_3 Identification type P11_1 Identification type P11_2 Identification type P11_3 Identification type P12_1 Identification type P12_2 Identification type P12_3 Identification type P141_1 Identification type P141_2 Identification type P141_3 Identification type P142_1 Identification type P142_2 Identification type P142_3 Fraction Average Fraction Std. Dev. Fraction 1 Fraction 2 Fraction 3 Fraction 10 Experiment input_1 Experiment input_2 Experiment input_3 Experiment P11_1 Experiment P11_2 Experiment P11_3 Experiment P12_1 Experiment P12_2 Experiment P12_3 Experiment P141_1 Experiment P141_2 Experiment P141_3 Experiment P142_1 Experiment P142_2 Experiment P142_3 Retention time Calibrated retention time Charges PEP MS/MS scan number Raw file Score Delta score Reverse Potential contaminant Intensity Intensity input_1 Intensity input_2 Intensity input_3 Intensity P11_1 Intensity P11_2 Intensity P11_3 Intensity P12_1 Intensity P12_2 Intensity P12_3 Intensity P141_1 Intensity P141_2 Intensity P141_3 Intensity P142_1 Intensity P142_2 Intensity P142_3 id Protein group IDs Peptide ID Evidence IDs MS/MS IDs Best MS/MS Oxidation (M) site IDs MS/MS Count Taxonomy IDs AAAAAAAAAAAATGTEAGPGTAGGSENGSEVAAQPAGLSGPAEVGPGAVGER Unmodified 4401.1069 0.10689087 397 O60341 KDM1A Lysine-specific histone demethylase 1A yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 2 2 1 2 2 2 2 2 1 2 1 78.397 78.464 4;5 1.1153E-166 90810 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 105.72 103.56 473110000 0 0 0 6572300 46974000 27180000 14052000 38540000 32524000 91971000 59672000 80416000 8454600 31180000 35577000 0 397 0 0;1;2;3;4;5;6;7;8;9;10;11;12;13;14;15;16;17;18;19 0;1;2;3;4;5;6;7;8;9;10;11;12;13;14;15;16;17;18 14 14 AAAAAAAAAAGAAGGR Acetyl (Protein N-term) 1239.632 0.63199703 3140 Q86U42 PABPN1 Polyadenylate-binding protein 2 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.159 73.225 2 8.6714E-28 84600 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 170.47 167.62 481080000 0 0 0 26883000 26042000 39741000 29925000 33707000 31038000 47987000 52145000 64442000 38387000 38890000 51894000 1 3140 1 20;21;22;23;24;25;26;27;28;29;30;31 19;20;21;22;23;24;25;26;27;28;29;30 27 12 AAAAAAAAAPAAAATAPTTAATTAATAAQ Unmodified 2367.203 0.2030165 1386 P37108 SRP14 Signal recognition particle 14 kDa protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.48 3.33 4 1 24 5 2 2 2 2 2 2 2 2 2 2 2 2 73.998 74.501 2;3;4 2.0576E-15 84427 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 124.16 109.48 3562200000 1651200000 0 0 88158000 113830000 117330000 137670000 136370000 91433000 179020000 215440000 215900000 159310000 179230000 277350000 2 1386 2 32;33;34;35;36;37;38;39;40;41;42;43;44;45;46;47;48;49;50;51;52;53;54;55;56;57;58;59;60 31;32;33;34;35;36;37;38;39;40;41;42;43;44;45;46;47;48;49;50;51;52 41 21 AAAAAAAAAVSR Unmodified 999.54614 0.54614213 3898 Q96JP5 ZFP91 E3 ubiquitin-protein ligase ZFP91 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 25.486 25.689 2 1.8029E-06 27458 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 114.5 80.758 623930000 0 0 0 59437000 53926000 46615000 45691000 34463000 37758000 63369000 45340000 87133000 33792000 41021000 75383000 3 3898 3 61;62;63;64;65;66;67;68;69;70;71;72 53;54;55;56;57;58;59;60;61;62;63;64;65;66;67;68 63 12 AAAAAAAAAVSRR Unmodified 1155.6473 0.64725316 3898 Q96JP5 ZFP91 E3 ubiquitin-protein ligase ZFP91 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 13 1 2 2 1 1 1 1 2 1 1 24.471 24.645 2;3 0.0043381 26620 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 41.401 20.029 82389000 0 0 0 4166100 14616000 13610000 0 8862100 9962500 4596900 14887000 0 3603500 0 8084100 4 3898 4 73;74;75;76;77;78;79;80;81;82;83;84;85 69;70;71;72;73;74;75;76;77 76 6 AAAAAAAAVPSAGPAGPAPTSAAGR Unmodified 2031.0498 0.049750745 5203 Q9Y4H2 IRS2 Insulin receptor substrate 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 1 1 2 1 1 1 2 52.698 52.873 2;3 1.5197E-28 59826 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 77.649 62.72 292530000 0 0 0 17901000 17833000 21178000 24108000 17204000 15479000 29394000 19086000 39017000 0 18962000 72366000 5 5203 5 86;87;88;89;90;91;92;93;94;95;96;97;98;99 78;79;80;81;82;83;84;85;86;87;88;89;90;91;92;93;94 85 17 AAAAAAAGDSDSWDADAFSVEDPVRK Acetyl (Protein N-term) 2634.1834 0.18340327 547 O75822 EIF3J Eukaryotic translation initiation factor 3 subunit J yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.06 3.85 1 7 2 6 3 5 2 1 1 1 1 1 1 86.633 84.364 2;3 3.2771E-168 101668 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 159.51 152.71 916720000 117170000 687410000 36760000 0 2801800 4363800 0 0 0 8925000 13525000 9331200 0 0 36431000 6 547 6 100;101;102;103;104;105;106;107;108;109;110;111;112;113;114;115 95;96;97;98;99;100;101;102;103;104;105;106;107;108;109;110;111 97 16 AAAAAAALQAK Unmodified 955.54508 0.5450795 1377 P36578 RPL4 60S ribosomal protein L4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 26.122 25.185 2 0.00026412 26950 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 105.14 69.091 1948100000 36213000 780840000 5829800 77868000 61921000 57557000 77587000 75778000 53376000 106350000 91058000 139720000 98056000 112320000 173660000 7 1377 7 116;117;118;119;120;121;122;123;124;125;126;127;128;129;130;131 112;113;114;115;116;117;118;119;120;121;122;123;124;125;126;127 118 15 AAAAAAAVGGQQPSQPELPAPGLALDK Acetyl (Protein N-term) 2540.3235 0.32346599 3014 Q6ZT12 UBR3 E3 ubiquitin-protein ligase UBR3 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS 7 4.24 1 2 1 1 1 94.334 96.195 3 3.0301E-08 89900 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 63.122 59.227 20582000 11904000 0 0 0 0 0 0 0 0 5299200 3378800 0 0 0 0 8 3014 8 132;133;134 128;129;130 129 3 AAAAAAGAASGLPGPVAQGLK Acetyl (Protein N-term) 1789.9686 0.96864688 3946 Q96P70 IPO9 Importin-9 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.25 2.49 2 22 1 1 2 2 2 2 1 2 2 2 2 1 2 2 85.909 86.219 2;3 1.1133E-139 97557 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 195.77 186.77 1281100000 196780000 165220000 0 22228000 38752000 144320000 51635000 24198000 35635000 135670000 93706000 97518000 24696000 85812000 164900000 9 3946 9 135;136;137;138;139;140;141;142;143;144;145;146;147;148;149;150;151;152;153;154;155;156;157;158 131;132;133;134;135;136;137;138;139;140;141;142;143;144;145;146;147;148;149;150 131 18 AAAAAAGAGPEMVR Acetyl (Protein N-term) 1283.6292 0.62921983 1236 P28482 MAPK1 Mitogen-activated protein kinase 1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.033 61.134 2 6.0862E-20 69796 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 136.96 117.18 262610000 0 0 0 12963000 9917900 23228000 16169000 16408000 8451500 29136000 30345000 26865000 15335000 20076000 53720000 10 1236 10 159;160;161;162;163;164;165;166;167;168;169;170 151;152;153;154;155;156;157;158;159;160;161;162;163 152 10 AAAAAAGAGPEMVR Acetyl (Protein N-term);Oxidation (M) 1299.6241 0.62413446 1236 P28482 MAPK1 Mitogen-activated protein kinase 1 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 46.151 46.273 2 0.00030158 51146 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.549 76.88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 1236 10 171;172;173;174 164;165;166;167 164 1829 4 AAAAAAGEARR Acetyl (Protein N-term) 1055.5472 0.54720476 882 P09417 QDPR Dihydropteridine reductase yes yes 1 0 1 By MS/MS 10 0 1 1 24.455 25.122 2 0.00058499 25600 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.516 61.223 8376400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8376400 12 882 11 175 168 168 1 AAAAAAGPSPGSGPGDSPEGPEGEAPER Acetyl (Protein N-term) 2530.1208 0.12080302 4924 Q9UID3 VPS51 Vacuolar protein sorting-associated protein 51 homolog yes yes 1 0 0 By MS/MS By matching 10 0 2 1 1 55.738 55.971 3 1.7548E-21 63595 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 54.259 46.362 6808300 0 0 0 0 0 2804300 0 0 0 0 4004000 0 0 0 0 13 4924 12 176;177 169 169 1 AAAAAALSGAGTPPAGGGAGGGGAGGGGSPPGGWAVAR Acetyl (Protein N-term) 2985.4441 0.44414326 2051 Q01167 FOXK2 Forkhead box protein K2 yes yes 1 0 0 By MS/MS 10 0 2 2 85.4 85.569 3 8.0267E-41 98841 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.228 54.505 6722400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6722400 14 2051 13 178;179 170;171 170 2 AAAAAATAAAAASIR Acetyl (Protein N-term) 1298.6943 0.69426293 3564 Q8WVM8 SCFD1 Sec1 family domain-containing protein 1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 84.528 84.634 2 1.933E-19 97687 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 133.07 107.83 87491000 0 0 0 0 5044100 6037100 5840200 6034100 3884900 10597000 6047300 10923000 5764100 8800100 18519000 15 3564 14 180;181;182;183;184;185;186;187;188;189;190 172;173;174;175;176;177;178;179;180;181;182;183;184;185;186 176 15 AAAAAATAPPSPGPAQPGPR Unmodified 1754.9064 0.90638097 2968 Q6SPF0 SAMD1 Atherin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 39.283 39.463 2;3 7.4862E-47 42887 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 113.65 97.017 442660000 0 0 0 22772000 27585000 34663000 29963000 30364000 31878000 41811000 51161000 58305000 33804000 30094000 50257000 16 2968 15 191;192;193;194;195;196;197;198;199;200;201;202;203;204;205;206;207;208;209;210;211;212;213;214 187;188;189;190;191;192;193;194;195;196;197;198;199;200;201;202;203;204 191 15 AAAAAAVGPGAGGAGSAVPGGAGPCATVSVFPGAR Acetyl (Protein N-term) 2948.4563 0.45628785 3190 Q86X55 CARM1 Histone-arginine methyltransferase CARM1 yes yes 1 0 0 By MS/MS By MS/MS 10 0 2 1 1 88.007 88.137 3 2.0701E-26 102143 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 53.895 47.864 10392000 0 0 0 0 0 0 0 0 0 6272500 0 0 0 0 4119500 17 3190 16 215;216 205;206 205 2 AAAAAGAGSGPWAAQEK Acetyl (Protein N-term) 1554.7427 0.74266969 2020 P86791;P86790 CCZ1;CCZ1B Vacuolar fusion protein CCZ1 homolog;Vacuolar fusion protein CCZ1 homolog B yes no 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.36 2.32 1 13 1 1 1 1 2 1 1 1 1 1 1 1 1 65.891 66.41 2 2.1583E-29 71513 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 138.45 128.44 63917000 2823300 0 0 3413000 3099000 5904600 4062600 0 2627600 7824400 7016600 8090300 4977600 4736900 9341100 18 2020 17 217;218;219;220;221;222;223;224;225;226;227;228;229;230 207;208;209;210;211;212;213;214;215;216;217;218;219;220;221 219 15 AAAAAGLGGGGAGPGPEAGDFLAR Acetyl (Protein N-term) 2052.0025 0.0024662011 1167 P23610 F8A1 Factor VIII intron 22 protein yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 85.97 86.047 2;3 9.9045E-56 99845 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 151.54 139.18 21483000 0 0 0 0 6137900 0 1328600 7203700 0 2925600 0 3886800 0 0 0 19 1167 18 231;232;233;234;235 222;223;224;225;226;227 222 5 AAAAAGTATSQR Acetyl (Protein N-term) 1116.5523 0.55234972 5131 Q9Y2Z0 SUGT1 Suppressor of G2 allele of SKP1 homolog yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.69 3.07 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 32.21 32.372 2 1.5684E-43 28271 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 179.51 155.48 1673600000 15207000 0 0 82443000 86221000 0 153310000 107960000 103300000 182540000 217450000 201230000 150260000 116000000 257650000 20 5131 19 236;237;238;239;240;241;242;243;244;245;246;247;248 228;229;230;231;232;233;234;235;236;237;238;239;240;241;242;243;244 240 17 AAAAALSQQQSLQER Unmodified 1570.8063 0.80633258 3550 Q8WUQ7 CACTIN Cactin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.858 38.038 2 1.759E-23 41652 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 123.67 105.61 67315000 0 0 0 3078600 4599100 4271200 3799300 5144700 2633300 7283300 5664100 11128000 7955500 4098100 7660300 21 3550 20 249;250;251;252;253;254;255;256;257;258;259;260 245;246;247;248;249;250;251;252;253;254;255;256 254 12 AAAAAMAEQESAR Acetyl (Protein N-term);Oxidation (M) 1333.5932 0.59322826 3051 Q7L5D6 GET4 Golgi to ER traffic protein 4 homolog yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 2 2 1 2 2 1 2 42.727 42.848 2 7.9712E-05 47664 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 76.143 65.911 224840000 0 0 0 14853000 14320000 23469000 18295000 16276000 15267000 21623000 16048000 22637000 12873000 19667000 29513000 22 3051 21 261;262;263;264;265;266;267;268;269;270;271;272;273;274;275;276;277;278;279;280;281;282 257;258;259;260;261;262;263;264;265;266;267;268;269;270;271;272;273;274;275;276 266 4678 12 AAAAAMAEQESAR Acetyl (Protein N-term) 1317.5983 0.59831364 3051 Q7L5D6 GET4 Golgi to ER traffic protein 4 homolog yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.251 60.356 2 0.00017209 68130 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.616 88.304 172950000 0 0 0 7223400 8024800 10838000 11443000 13049000 9966600 13139000 18025000 25345000 13536000 15573000 26784000 23 3051 21 283;284;285;286;287;288;289;290;291;292;293;294 277;278;279;280;281;282;283;284;285;286;287;288;289 280 13 AAAAAQGGGGGEPR Acetyl (Protein N-term) 1210.5691 0.56906242 1215 P27361 MAPK3 Mitogen-activated protein kinase 3 yes yes 1 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.31 2.4 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 27.932 28.526 2 1.4901E-20 24390 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 141.88 120.37 308150000 1174100 0 0 20205000 15251000 30003000 20991000 18410000 11561000 27388000 31591000 33782000 31298000 26802000 39690000 24 1215 22 295;296;297;298;299;300;301;302;303;304;305;306;307 290;291;292;293;294;295;296;297;298;299;300;301;302;303;304;305;306 305 17 AAAAAQGGGGGEPRRTEGVGPGVPGEVEMVK Acetyl (Protein N-term) 2932.4461 0.4461171 1215 P27361 MAPK3 Mitogen-activated protein kinase 3 yes yes 1 0 2 By matching By MS/MS By MS/MS 2 0 4 1 1 2 72.092 66.886 3;4 4.1196E-68 85716 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.14 104.08 69496000 9120600 24809000 35566000 0 0 0 0 0 0 0 0 0 0 0 0 25 1215 23 308;309;310;311 307;308;309 307 3 AAAAAQGGGGGEPRRTEGVGPGVPGEVEMVK Acetyl (Protein N-term);Oxidation (M) 2948.441 0.44103172 1215 P27361 MAPK3 Mitogen-activated protein kinase 3 yes yes 1 1 2 By MS/MS 2 0 1 1 62.067 58.304 3 1.2732E-16 72388 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 72.569 60.604 24458000 0 0 24458000 0 0 0 0 0 0 0 0 0 0 0 0 26 1215 23 312 310 310 1784 1 AAAAASAAGPGGLVAGK Unmodified 1338.7256 0.72556306 29 A6NIH7 UNC119B Protein unc-119 homolog B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 2 1 1 1 1 1 1 1 42.924 41.994 2 1.0328E-27 53830 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.71 115.11 182170000 0 130040000 0 4253500 0 6483300 0 0 0 7475100 9011000 9252900 0 5688300 9967900 27 29 24 313;314;315;316;317;318;319;320;321;322;323;324 311;312;313;314;315;316;317;318;319;320;321;322;323 314 13 AAAAASASQDELNQLER Acetyl (Protein N-term) 1785.8493 0.8493196 2828 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 78.15 78.212 2 1.4139E-12 90421 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 137.59 114.67 33471000 0 0 0 0 2396100 5718100 0 0 0 8002700 6692700 0 0 3562500 7098400 28 2828 25 325;326;327;328;329;330;331 324;325;326;327;328;329;330 325 6 AAAAASGAGGAAGAGTGGAGPAGR Acetyl (Protein N-term) 1795.8561 0.85613631 5108 Q9Y2K2 SIK3 Serine/threonine-protein kinase SIK3 yes yes 1 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.599 41.779 2 2.7545E-82 46459 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 189.37 174.34 56504000 0 0 0 3963100 3019600 4754300 5690200 3334300 3290000 0 7583500 8204100 5903700 4060100 6701300 29 5108 26 332;333;334;335;336;337;338;339;340;341;342;343 331;332;333;334;335;336;337;338;339;340 339 10 AAAAASHLNLDALR Acetyl (Protein N-term) 1434.7579 0.75792582 2229 Q13049 TRIM32 E3 ubiquitin-protein ligase TRIM32 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 80.616 80.714 2 3.7741E-14 92990 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 122.55 109.59 33328000 0 0 0 0 1746100 0 2594900 3051100 0 4968200 4672600 0 2472200 4439300 9383200 30 2229 27 344;345;346;347;348;349;350;351;352;353 341;342;343;344;345;346;347;348;349;350 344 10 AAAAATVVPPMVGGPPFVGPVGFGPGDR Unmodified 2590.3366 0.33661363 4141 Q9BTD8 RBM42 RNA-binding protein 42 yes yes 0 0 0 By MS/MS 10 0 1 1 95.115 95.262 3 0.0061288 110486 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 21.882 14.184 1304700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1304700 31 4141 28 354 351 351 1 AAAAAWEEPSSGNGTAR Unmodified 1644.7492 0.74921163 4806 Q9P258 RCC2 Protein RCC2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 38.496 37.949 2 5.117E-41 42090 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 146.16 131.74 130660000 0 23436000 0 6517800 5947200 6049300 6501800 8917800 5129900 8462500 15881000 15850000 6251700 5537700 16180000 32 4806 29 355;356;357;358;359;360;361;362;363;364;365;366;367;368 352;353;354;355;356;357;358;359;360;361;362;363;364;365 359 14 AAAAAWEEPSSGNGTARAGPRK Unmodified 2154.0566 0.056627037 4806 Q9P258 RCC2 Protein RCC2 yes yes 0 0 2 By MS/MS 2 0 2 2 37.724 31.226 3;4 0.0020688 43605 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.564 52.174 26950000 26950000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33 4806 30 369;370 366;367 367 2 AAAADERSPEDGEDEEEEEQLVLVELSGIIDSDFLSK Acetyl (Protein N-term) 4075.8757 0.87571968 3712 Q969F1 GTF3C6 General transcription factor 3C polypeptide 6 yes yes 1 0 1 By MS/MS By MS/MS 2 0 2 1 1 104.61 98.175 3 9.7125E-94 123532 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.47 111.88 23610000 12334000 11276000 0 0 0 0 0 0 0 0 0 0 0 0 0 34 3712 31 371;372 368;369 368 2 AAAADSFSGGPAGVR Acetyl (Protein N-term) 1374.6528 0.65279205 3805 Q96E14 RMI2 RecQ-mediated genome instability protein 2 yes yes 1 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 63.592 63.743 2 0.00040165 73026 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 74.944 60.278 15197000 0 0 0 0 0 3218500 0 0 0 4573800 7404900 0 0 0 0 35 3805 32 373;374;375;376;377;378;379 370;371;372;373;374;375;376 371 7 AAAAECDVVMAATEPELLDDQEAK Acetyl (Protein N-term);Oxidation (M) 2604.1571 0.15711345 4035 Q99615 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.18 2.59 2 20 1 1 2 2 1 2 1 2 3 2 1 1 3 90.56 90.899 2;3 5.3519E-57 95835 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 128.98 126.62 272370000 13113000 43088000 0 2022700 13969000 2532800 8516900 5909900 7888800 54813000 35324000 12712000 0 13218000 59266000 36 4035 33 380;381;382;383;384;385;386;387;388;389;390;391;392;393;394;395;396;397;398;399;400;401 377;378;379;380;381;382;383;384;385;386;387;388;389;390;391;392 386 5537 16 AAAAECDVVMAATEPELLDDQEAK Acetyl (Protein N-term) 2588.1622 0.16219882 4035 Q99615 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.67 4.35 2 1 3 1 2 1 1 1 97.442 97.746 3 2.8123E-69 90039 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 139.26 135.3 190790000 79503000 97481000 0 0 0 0 0 1067200 0 0 3597200 0 0 0 9142200 37 4035 33 402;403;404;405;406;407 393;394;395;396;397 395 5 AAAAEGVLATR Acetyl (Protein N-term) 1070.572 0.57202253 2965 Q6QNY1 BLOC1S2 Biogenesis of lysosome-related organelles complex 1 subunit 2 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 70.717 70.959 2 9.5689E-05 80608 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 90.15 64.591 32667000 0 0 0 0 0 0 0 0 0 0 0 0 7504400 9010900 16152000 38 2965 34 408;409;410;411 398;399;400;401 400 3 AAAAEGVLATRSDEPARDDAAVETAEEAK Acetyl (Protein N-term) 2955.4058 0.40575165 2965 Q6QNY1 BLOC1S2 Biogenesis of lysosome-related organelles complex 1 subunit 2 yes yes 1 0 2 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 76.792 71.52 3 9.3622E-48 91626 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 108.57 98.979 74468000 23810000 44309000 6348800 0 0 0 0 0 0 0 0 0 0 0 0 39 2965 35 412;413;414 402;403 403 2 AAAAELSLLEK Acetyl (Protein N-term) 1156.634 0.63395409 319 O43324 EEF1E1 Eukaryotic translation elongation factor 1 epsilon-1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.53 3.67 1 7 2 22 2 7 1 2 3 2 2 2 2 2 2 1 2 1 1 90.32 89.459 1;2 3.079E-12 108170 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 212.21 158.44 3628900000 543540000 2538200000 1295000 17511000 33154000 42528000 32508000 34414000 27919000 63476000 57369000 61037000 35583000 46769000 93660000 40 319 36 415;416;417;418;419;420;421;422;423;424;425;426;427;428;429;430;431;432;433;434;435;436;437;438;439;440;441;442;443;444;445;446 404;405;406;407;408;409;410;411;412;413;414;415;416;417;418;419;420;421;422;423;424;425;426 411 21 AAAAGAAAAAAAEGEAPAEMGALLLEK Acetyl (Protein N-term);Oxidation (M) 2453.2108 0.210804 3912 Q96KQ7 EHMT2 Histone-lysine N-methyltransferase EHMT2 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.71 3.81 2 1 4 3 1 1 1 1 92.574 91.508 3 2.4564E-15 110917 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.226 68.011 76339000 0 60377000 0 0 0 0 681590 0 0 0 5343400 3839000 0 0 6098000 41 3912 37 447;448;449;450;451;452;453 427;428;429;430;431 427 5411 5 AAAAGAAAAAAAEGEAPAEMGALLLEK Acetyl (Protein N-term) 2437.2159 0.21588937 3912 Q96KQ7 EHMT2 Histone-lysine N-methyltransferase EHMT2 yes yes 1 0 0 By MS/MS By MS/MS 2 0.816 1 1 1 1 2 101.62 100.69 3 8.1317E-78 117219 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.14 119.86 421460000 103110000 318350000 0 0 0 0 0 0 0 0 0 0 0 0 0 42 3912 37 454;455;456 432;433;434;435 432 4 AAAAGDADDEPR Acetyl (Protein N-term) 1199.5055 0.50545911 2906 Q6NXT1 ANKRD54 Ankyrin repeat domain-containing protein 54 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.785 26.986 2 0.001025 28840 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 74.841 58.301 148710000 0 0 0 8742800 7545800 9913400 9101100 12806000 8026400 14985000 16841000 14778000 16684000 11253000 18035000 43 2906 38 457;458;459;460;461;462;463;464;465;466;467;468 436;437;438;439;440;441;442;443;444;445;446;447 437 12 AAAAGDGGGEGGAGLGSAAGLGPGPGLR Acetyl (Protein N-term) 2262.0989 0.098885782 4516 Q9HCJ3 RAVER2 Ribonucleoprotein PTB-binding 2 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 1 1 2 2 1 2 2 1 2 2 2 78.786 78.88 2;3 1.6676E-107 90895 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 169.98 152.18 576910000 0 0 0 20367000 45720000 36556000 51465000 45856000 27887000 56490000 65982000 59527000 47321000 53815000 65923000 44 4516 39 469;470;471;472;473;474;475;476;477;478;479;480;481;482;483;484;485;486;487 448;449;450;451;452;453;454;455;456;457;458;459;460;461;462;463;464;465;466;467;468;469;470;471;472;473;474 457 24 AAAAGGPCVR Acetyl (Protein N-term) 970.46545 0.46544897 2756 Q5SRE5 NUP188 Nucleoporin NUP188 homolog yes yes 1 0 0 By MS/MS By MS/MS By matching By matching 10 0 4 1 1 1 1 31.284 31.376 2 0.010036 34669 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 42.835 34.012 12999000 0 0 0 0 3050400 2699500 0 0 0 0 4655200 0 0 2593600 0 45 2756 40 488;489;490;491 475 475 1 AAAAGRFPAQVPSAHQPSASGGAAAAAAAPAAPAAPR Unmodified 3262.6708 0.67078915 3455 Q8NHG8 ZNRF2 E3 ubiquitin-protein ligase ZNRF2 yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 60.176 60.719 4 0.00017653 68637 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 24.327 22.045 15823000 0 0 0 0 0 0 0 0 0 0 0 5807200 0 0 10016000 46 3455 41 492;493 476 476 1 AAAANIDEVQK Unmodified 1128.5775 0.57750184 2551 Q15596 NCOA2 Nuclear receptor coactivator 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.692 26.893 2 6.3305E-05 28265 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 113.62 90.302 137040000 0 0 0 9802300 5507200 11176000 8591200 14095000 7216300 12246000 11872000 22179000 13067000 8053200 13233000 47 2551 42 494;495;496;497;498;499;500;501;502;503;504;505 477;478;479;480;481;482;483;484 483 7 AAAAPAATTATPPPEGAPPQPGVHNLPVPTLFGTVK Unmodified 3442.8249 0.82488976 5059 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 15 1 1 2 1 2 2 1 1 2 2 87.323 87.442 3;4 5.7632E-22 101223 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.993 44.088 72850000 0 0 0 0 982270 1232800 0 4756400 2280200 13058000 8010200 5649300 2508200 7762800 26610000 48 5059 43 506;507;508;509;510;511;512;513;514;515;516;517;518;519;520 485;486;487;488;489;490;491;492 487 8 AAAAPAGGNPEQR Unmodified 1208.5898 0.58979786 2858 Q68DK7 MSL1 Male-specific lethal 1 homolog yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 12.635 12.787 2 0.0040802 11671 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 62.303 43.991 19416000 0 0 0 1111000 939920 1222600 1094100 0 0 2682900 1985500 2977300 3184100 1697700 2521100 49 2858 44 521;522;523;524;525;526;527;528;529;530 493;494;495;496;497;498;499;500;501 500 8 AAAAPDSR Acetyl (Protein N-term) 799.38243 0.38243085 5154 Q9Y3B9 RRP15 RRP15-like protein yes yes 1 0 0 By matching By matching By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 14.534 14.663 2 0.016 13383 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 47.082 27.445 13537000 0 0 0 0 1899700 0 2827500 0 3512500 0 0 1796800 0 3500900 0 50 5154 45 531;532;533;534;535 502 502 1 AAAAPDSRVSEEENLK Acetyl (Protein N-term) 1727.8326 0.83260691 5154 Q9Y3B9 RRP15 RRP15-like protein yes yes 1 0 1 By MS/MS 2 0 1 1 48.271 42.624 2 2.2854E-31 55434 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 143.94 101.6 92746000 0 92746000 0 0 0 0 0 0 0 0 0 0 0 0 0 51 5154 46 536 503 503 1 AAAAPFQTSQASASAPR Unmodified 1630.8063 0.80633258 3915 Q96L91 EP400 E1A-binding protein p400 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 2 1 1 1 43.751 43.87 2 5.8197E-36 48153 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 125.54 114.01 115520000 0 0 0 7067000 8155800 10507000 7200300 11548000 0 13397000 19685000 0 10647000 11182000 16135000 52 3915 47 537;538;539;540;541;542;543;544;545;546;547 504;505;506;507;508;509;510;511;512;513 507 10 AAAAPVAADDDERR Acetyl (Protein N-term) 1468.6906 0.69063412 4408 Q9H5N1 RABEP2 Rab GTPase-binding effector protein 2 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 33.326 33.564 2 1.1592E-13 36563 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 112.13 94.693 53211000 0 0 0 0 2009400 3952200 2595700 4161500 2738800 5695200 8411300 6297700 3990700 4923100 8434900 53 4408 48 548;549;550;551;552;553;554;555;556;557;558 514;515;516;517;518;519;520;521;522;523;524;525 519 12 AAAAQLSLTQLSSGNPVYEK Acetyl (Protein N-term) 2089.0691 0.069148783 1457 P42566 EPS15 Epidermal growth factor receptor substrate 15 yes yes 1 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 2 1 1 1 1 1 1 1 89.298 89.392 2 7.7001E-59 103807 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 127.76 115.59 18414000 0 0 0 0 1288500 0 726040 0 0 4707800 2791400 2748900 1124500 1661700 3365400 54 1457 49 559;560;561;562;563;564;565;566;567 526;527;528;529;530;531;532 528 7 AAAASAAEAGIATTGTEDSDDALLK Unmodified 2319.1078 0.10777871 1752 P55036 PSMD4 26S proteasome non-ATPase regulatory subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 71.248 71.322 2;3 1.0026E-90 82064 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 172.91 159.51 513460000 0 0 0 24308000 45774000 49941000 16612000 15763000 11453000 82554000 85705000 107980000 10291000 18170000 44904000 55 1752 50 568;569;570;571;572;573;574;575;576;577;578;579;580;581;582;583;584;585;586;587;588;589;590;591 533;534;535;536;537;538;539;540;541;542;543;544;545;546;547;548 533 16 AAAASVPNADGLK Unmodified 1183.6197 0.619701 10 A1X283 SH3PXD2B SH3 and PX domain-containing protein 2B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 39.386 39.156 2 0.0027574 43806 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.595 56.815 190460000 0 15028000 0 14142000 11119000 12145000 15646000 11180000 9591400 13399000 17979000 19894000 16390000 13772000 20175000 56 10 51 592;593;594;595;596;597;598;599;600;601;602;603;604 549;550;551;552;553;554;555;556;557;558;559;560;561 549 9 AAAATMAAAAR Acetyl (Protein N-term) 1016.5073 0.50731378 3310 Q8N1B4 VPS52 Vacuolar protein sorting-associated protein 52 homolog yes yes 1 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 56.651 57.012 2 0.00086745 64574 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 66.546 40.162 13049000 0 0 0 0 0 0 0 0 0 5159200 0 7890000 0 0 0 57 3310 52 605;606;607 562;563;564 564 3 AAAAVAAAASSCRPLGSGAGPGPTGAAPVSAPAPGPGPAGK Unmodified 3449.7474 0.74738449 4606 Q9NRL3 STRN4 Striatin-4 yes yes 0 0 1 By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 69.26 69.399 4 4.277E-11 79391 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.973 30.865 26638000 0 0 0 0 1989700 0 3063000 2823600 1947500 4357800 0 3758600 0 0 8697800 58 4606 53 608;609;610;611;612;613;614 565;566;567;568 567 3 AAAAVGAGHGAGGPGAASSSGGAR Acetyl (Protein N-term) 1905.9041 0.90414914 3902 Q96K37 SLC35E1 Solute carrier family 35 member E1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 34.999 35.312 3 1.398E-23 39056 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 74.561 66.697 51780000 0 0 0 0 0 0 9922500 11989000 0 13749000 7844200 0 0 0 8274800 59 3902 54 615;616;617;618;619;620 569;570;571;572;573;574 574 6 AAAAVQGGR Acetyl (Protein N-term) 841.44061 0.44061443 2469 Q15005 SPCS2 Signal peptidase complex subunit 2 yes yes 1 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 24.17 24.716 2 0.0045797 25112 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.679 28.042 38384000 0 0 0 0 0 0 0 0 0 0 8107300 12983000 7668400 0 9624700 60 2469 55 621;622;623;624 575;576;577 575 3 AAAAVSSAK Acetyl (Protein N-term) 816.43413 0.43413207 1611 P49914 MTHFS 5-formyltetrahydrofolate cyclo-ligase yes yes 1 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS 9.1 2.7 1 9 1 1 1 1 1 1 1 1 1 1 34.66 35.288 2 0.0058475 28910 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.112 31.14 233140000 10012000 0 0 18364000 34208000 30594000 14629000 12866000 11329000 28918000 31300000 40916000 0 0 0 61 1611 56 625;626;627;628;629;630;631;632;633;634 578;579;580;581 581 4 AAAAVVAAAAR Unmodified 940.54541 0.54541385 3572 Q8WWH5 TRUB1 Probable tRNA pseudouridine synthase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.624 31.866 2 0.0019798 34791 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 69.825 47.694 185940000 0 0 0 9447300 0 17880000 14736000 11471000 7960500 22284000 20299000 29160000 15972000 9773000 26956000 62 3572 57 635;636;637;638;639;640;641;642;643;644;645;646 582;583;584;585;586;587;588;589;590;591;592;593 584 12 AAAAVVEFQR Acetyl (Protein N-term) 1102.5771 0.57710791 129 O00231 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.074 77.135 2 1.2021E-08 89053 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 155.1 128.41 715220000 0 0 0 16965000 54548000 61991000 22776000 6917900 15224000 112520000 149960000 157450000 18410000 25969000 72494000 63 129 58 647;648;649;650;651;652;653;654;655;656;657;658 594;595;596;597;598;599;600;601;602;603;604;605 595 12 AAAAVVVPAEWIK Acetyl (Protein N-term) 1365.7656 0.76563696 3465 Q8NI27 THOC2 THO complex subunit 2 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.48 1 2 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 96.714 96.092 2 7.4507E-06 111206 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.108 85.413 537520000 46773000 304560000 0 4397600 11891000 10871000 9652000 12505000 11139000 28393000 19074000 17451000 12558000 15484000 32777000 64 3465 59 659;660;661;662;663;664;665;666;667;668;669;670;671;672;673;674 606;607;608;609;610;611;612;613;614;615;616;617;618;619;620;621;622;623;624;625;626;627;628;629 615 24 AAACRSVK Acetyl (Protein N-term) 903.45964 0.45963531 4051 Q99714 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 yes yes 1 0 1 By MS/MS 2.5 0.5 1 1 2 12.779 9.4204 2 0.014713 12187 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 80.229 41.437 69290000 0 69290000 0 0 0 0 0 0 0 0 0 0 0 0 0 65 4051 60 675;676 630;631 631 2 AAADGALPEAAALEQPAELPASVR Acetyl (Protein N-term) 2359.202 0.20195387 1148 P23025 XPA DNA repair protein complementing XP-A cells yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 2 1 1 1 1 1 1 1 90.223 90.331 2;3 5.9909E-12 104715 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 69.398 65.666 43441000 0 0 0 0 3852100 3017200 2566800 3264900 2418100 5581200 5186700 5850600 2351600 2769500 6582200 66 1148 61 677;678;679;680;681;682;683;684;685;686;687;688 632;633;634;635;636;637;638;639;640;641;642;643;644 644 13 AAADGGGPGGASVGTEEDGGGVGHR Acetyl (Protein N-term) 2178.9526 0.95261548 28 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 1 2 3 2 1 2 2 2 2 2 2 2 39.79 40.001 2;3 2.8458E-51 44592 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 109.08 105.58 195840000 0 0 0 3797500 9344100 22233000 11008000 3610000 11762000 29926000 26807000 23492000 13129000 14194000 26535000 67 28 62 689;690;691;692;693;694;695;696;697;698;699;700;701;702;703;704;705;706;707;708;709;710;711 645;646;647;648;649;650;651;652;653;654;655;656;657;658 645 14 AAADTLQGPMQAAYR Unmodified 1562.7511 0.75112588 2927 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 58.721 58.548 2 0.006408 66638 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 41.08 17.475 5487200 0 0 0 0 1869700 0 0 3617500 0 0 0 0 0 0 0 68 2927 63 712;713 659;660 659 2 AAADTLQGPMQAAYR Oxidation (M) 1578.746 0.7460405 2927 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 yes yes 0 1 0 By MS/MS 10 0 1 1 41.57 41.915 2 0.030269 46860 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 42.395 21.525 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 69 2927 63 714 661 661 1 AAAEAAAEAK Unmodified 901.45051 0.45051041 5031 Q9UNF1 MAGED2 Melanoma-associated antigen D2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.34 1 2 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 13.779 13.478 2 0.00092144 4947 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 113.71 28.031 376410000 36318000 112570000 0 13252000 15336000 26039000 24730000 26702000 18524000 16220000 23019000 12756000 16123000 13903000 20912000 70 5031 64 715;716;717;718;719;720;721;722;723;724;725;726;727;728;729 662;663;664;665;666;667;668;669;670;671;672;673;674;675 663 11 AAAEAGGDDAR Acetyl (Protein N-term) 1044.4472 0.44721595 23 A6NDG6 PGP Phosphoglycolate phosphatase yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 15.764 16.041 2 0.00014098 14838 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.355 80.448 158490000 0 0 0 3059700 0 0 0 2638300 0 3400500 24803000 28737000 6089700 26392000 63374000 71 23 65 730;731;732;733;734;735;736;737;738;739 676;677;678;679;680;681;682;683;684;685 678 10 AAAEDVNVTFEDQQK Unmodified 1663.7689 0.76894402 4572 Q9NQP4 PFDN4 Prefoldin subunit 4 yes yes 0 0 0 By MS/MS 10 0 1 1 50.056 50.767 2 1.2329E-51 56430 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 226.33 209.17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 72 4572 66 740 686 686 1 AAAEEEDGGPEGPNRER Acetyl (Protein N-term) 1824.7874 0.78744763 4071 Q99942 RNF5 E3 ubiquitin-protein ligase RNF5 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 27.553 27.946 2 5.6819E-25 29740 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 107.85 83.996 48642000 0 0 0 0 0 0 5320900 0 0 7470200 7343300 12051000 0 6702800 9753800 73 4071 67 741;742;743;744;745;746 687;688;689;690;691;692 690 6 AAAEEEPKPK Acetyl (Protein N-term) 1110.5557 0.55570376 1765 P55263 ADK Adenosine kinase yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.8 3.67 2 1 1 11 1 3 1 1 1 1 1 1 1 1 1 1 1 30.248 30.309 2 0.0015608 17064 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.709 71.005 99436000 17459000 33207000 0 1382600 1150100 2892800 1305100 1971500 0 3092700 6128200 8445600 1933100 5729400 14740000 74 1765 68 747;748;749;750;751;752;753;754;755;756;757;758;759;760;761 693;694;695;696;697;698;699;700;701;702;703;704;705;706 696 14 AAAEEGCSVGAEADRELEELLESALDDFDK Acetyl (Protein N-term) 3280.4565 0.45652617 1421 P40855 PEX19 Peroxisomal biogenesis factor 19 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS 2.5 0.5 2 2 1 2 1 104.92 101.31 3 6.8256E-21 121661 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 79.017 71.084 89330000 4410000 82305000 2615400 0 0 0 0 0 0 0 0 0 0 0 0 75 1421 69 762;763;764;765 707;708;709;710;711 709 5 AAAEIYEEFLAAFEGSDGNK Unmodified 2130.9746 0.9745797 244 O15042 U2SURP U2 snRNP-associated SURP motif-containing protein yes yes 0 0 0 By MS/MS By MS/MS 2.75 0.433 1 3 3 1 99.824 95.166 2;3 9.9407E-129 119060 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 206.2 192.79 24857000 22487000 2369500 0 0 0 0 0 0 0 0 0 0 0 0 0 76 244 70 766;767;768;769 712;713;714 714 3 AAAEPSPR Acetyl (Protein N-term) 839.41373 0.41373097 2705 Q53H96 PYCRL Pyrroline-5-carboxylate reductase 3 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.801 20.005 2 0.0020494 20239 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 101.64 64.549 189700000 0 0 0 10316000 14720000 16305000 20535000 23066000 19853000 17874000 19510000 20198000 9927300 7201300 10198000 77 2705 71 770;771;772;773;774;775;776;777;778;779;780;781 715;716;717;718;719;720;721;722;723;724 722 10 AAAEQAISVR Unmodified 1014.5458 0.54580778 2062 Q01780 EXOSC10 Exosome component 10 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.783 29.974 2 0.0033461 32304 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 76.827 26.123 74108000 0 0 0 5114300 3289800 4273100 4739500 4530500 3173200 5398100 6872700 9431500 8325200 7086200 11874000 78 2062 72 782;783;784;785;786;787;788;789;790;791;792;793 725;726;727;728;729;730;731;732;733;734 732 10 AAAETQSLR Acetyl (Protein N-term) 987.49852 0.49852324 2308 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 35.655 36.11 2 0.0016352 39903 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 84.743 64.966 65430000 0 0 0 0 0 0 0 0 0 9983300 0 15357000 11205000 13758000 15127000 79 2308 73 794;795;796;797;798;799;800;801;802;803;804 735;736;737;738;739;740;741;742;743;744 736 10 AAAEVADTQLMLGVGLIEK Acetyl (Protein N-term) 1970.0394 0.039428559 3488 Q8TCE6 FAM45A Protein FAM45A yes yes 1 0 0 By MS/MS By MS/MS 2.5 0.5 2 2 2 2 100.37 95.419 2;3 1.2137E-17 118906 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.808 75.751 32020000 6077000 25943000 0 0 0 0 0 0 0 0 0 0 0 0 0 80 3488 74 805;806;807;808 745;746;747 745 3 AAAEVADTQLMLGVGLIEK Acetyl (Protein N-term);Oxidation (M) 1986.0343 0.034343181 3488 Q8TCE6 FAM45A Protein FAM45A yes yes 1 1 0 By MS/MS 1 0 1 1 106.16 111.42 3 0.0010515 92075 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 43.116 34.828 21600000 21600000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 81 3488 74 809 748 748 5009 1 AAAFEEQENETVVVK Unmodified 1662.8101 0.81008055 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 54.952 54.075 2 6.0168E-19 60754 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 108.7 94.462 279120000 0 189710000 3124400 0 3032100 7352100 3888400 4087700 5037000 9792300 9347100 14860000 8478400 4784700 15628000 82 5187 75 810;811;812;813;814;815;816;817;818;819;820;821;822;823 749;750;751;752;753;754;755;756;757;758;759;760;761;762;763;764;765;766 756 18 AAAFEQLQK Unmodified 1004.5291 0.52909508 590 O94826 TOMM70A Mitochondrial import receptor subunit TOM70 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 38.27 38.436 2 0.012712 42621 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 60.895 38.004 52789000 0 0 0 4866200 3856900 0 7360400 3763200 3698000 4123000 0 4821800 7090800 5162400 8045900 83 590 76 824;825;826;827;828;829;830;831;832;833 767 767 1 AAAFQVAPHSHGEEAVAQDRIPSGK Unmodified 2572.2782 0.27824713 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 47.876 48.325 4 0.0010445 53269 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 29.959 26.539 15148000 0 0 0 0 0 0 0 6284700 0 0 0 0 0 0 8863300 84 645 77 834;835 768 768 1 AAAGAGPGQEAGAGPGPGAVANATGAEEGEMK Acetyl (Protein N-term);Oxidation (M) 2808.2621 0.2620643 4846 Q9UBL3 ASH2L Set1/Ash2 histone methyltransferase complex subunit ASH2 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 62.326 62.41 3 2.7007E-30 71378 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.984 62.58 67740000 0 0 0 0 7808100 8756200 0 8331100 7706600 12311000 0 12505000 10322000 0 0 85 4846 78 836;837;838;839;840;841;842 769;770;771;772;773;774;775;776 775 6211 8 AAAGAGPGQEAGAGPGPGAVANATGAEEGEMK Acetyl (Protein N-term) 2792.2671 0.26714968 4846 Q9UBL3 ASH2L Set1/Ash2 histone methyltransferase complex subunit ASH2 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 69.385 69.479 3 1.7944E-30 79779 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 68.101 55.668 69558000 0 0 0 0 5605600 7079500 0 8124900 0 7280200 11398000 0 10238000 0 19833000 86 4846 78 843;844;845;846;847;848;849 777;778;779;780;781;782;783;784 777 8 AAAGDAPPAAAPAASCSASLPGALGGSAGAAGAEDSYGLVAPATAAYR Unmodified 4228.0131 0.013113827 5203 Q9Y4H2 IRS2 Insulin receptor substrate 2 yes yes 0 0 0 By MS/MS 10 0 1 1 86.689 86.797 4 5.0768E-06 100607 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 21.555 17.023 11498000 0 0 0 0 0 0 0 0 0 11498000 0 0 0 0 0 87 5203 79 850 785 785 1 AAAGEFADDPCSSVK Unmodified 1523.6562 0.65622244 1340 P35221 CTNNA1 Catenin alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 43.223 41.893 2 7.8256E-07 46317 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.09 107.09 513840000 19171000 118220000 0 14136000 18348000 38274000 24856000 22311000 15380000 39453000 38891000 33242000 36832000 31901000 62824000 88 1340 80 851;852;853;854;855;856;857;858;859;860;861;862;863;864;865;866 786;787;788;789;790;791;792;793;794;795;796;797;798;799;800 790 15 AAAGELQEDSGLCVLAR Unmodified 1758.857 0.85704752 3770 Q96C19 EFHD2 EF-hand domain-containing protein D2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.43 3.02 1 2 11 2 1 1 1 1 1 1 1 1 1 1 1 1 74.59 73.935 2;3 2.0447E-31 85333 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 120.57 105.03 135300000 0 21288000 9263100 2974700 4138700 7583000 4118800 0 5438400 10602000 12728000 14338000 7157100 10060000 25612000 89 3770 81 867;868;869;870;871;872;873;874;875;876;877;878;879;880 801;802;803;804;805;806;807;808;809;810;811;812;813;814;815 813 14 AAAGELQEDSGLCVLARLSEIDVSSEGVK Unmodified 3002.4866 0.48664451 3770 Q96C19 EFHD2 EF-hand domain-containing protein D2 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 97.4 91.583 3 1.5602E-67 115891 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 125.12 116.27 47096000 47096000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 90 3770 82 881;882 816;817 817 2 AAAGGAEGRR Acetyl (Protein N-term) 956.47879 0.47879085 3149 Q86UK7 ZNF598 Zinc finger protein 598 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 7.5979 7.7064 2 2.6485E-23 6230 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 173.73 154.75 220630000 0 0 0 9195200 10062000 12478000 18239000 16573000 19137000 23949000 43301000 26605000 21906000 19187000 0 91 3149 83 883;884;885;886;887;888;889;890;891;892;893 818;819;820;821;822;823;824 822 5 AAAGGGGGGAAAAGR Acetyl (Protein N-term) 1112.5323 0.53228298 4984 Q9UL25 RAB21 Ras-related protein Rab-21 yes yes 1 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.531 15.701 2 6.0045E-71 14504 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 179.8 164.65 396360000 0 0 0 14605000 15961000 18006000 22242000 30389000 16312000 38291000 54946000 47564000 37077000 41913000 59051000 92 4984 84 894;895;896;897;898;899;900;901;902;903;904;905 825;826;827;828;829;830;831;832;833;834;835;836;837 828 13 AAAGGGGGGAAAAGRAYSFK Acetyl (Protein N-term) 1708.8281 0.82813065 4984 Q9UL25 RAB21 Ras-related protein Rab-21 yes yes 1 0 1 By MS/MS 2 0 1 1 56.862 48.682 2 2.4926E-43 66581 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 125.82 116.88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 93 4984 85 906 838 838 1 AAAGGQGSAVAAEAEPGKEEPPAR Unmodified 2220.0771 0.077087707 4307 Q9GZT9 EGLN1 Egl nine homolog 1 yes yes 0 0 1 By MS/MS 10 0 1 1 35.02 35.747 3 3.0768E-14 38374 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.052 39.293 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 94 4307 86 907 839 839 1 AAAGLGGGDSGDGTAR Unmodified 1331.6066 0.60657014 3998 Q96T51 RUFY1 RUN and FYVE domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.947 16.123 2 1.2949E-07 15913 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 95.018 79.479 112110000 0 0 0 5317900 4391900 7196400 7625400 4907500 7022300 9315000 10459000 13035000 13850000 14583000 14406000 95 3998 87 908;909;910;911;912;913;914;915;916;917;918;919 840;841;842;843;844;845;846;847 844 8 AAAGQESEGPAVGPPQPLGK Unmodified 1859.9377 0.93774068 183 O14497 ARID1A AT-rich interactive domain-containing protein 1A yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 53.68 53.444 2 9.6248E-06 60466 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 62.924 51.058 18530000 0 0 0 4082400 1989000 0 8325400 4132800 0 0 0 0 0 0 0 96 183 88 920;921;922;923 848;849;850 848 3 AAAGSAAGGFQR Unmodified 1062.5207 0.52065566 3444 Q8NFD5 ARID1B AT-rich interactive domain-containing protein 1B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 19.455 19.414 2 0.004747 20132 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 74.464 48.905 12018000 0 0 0 0 4126800 0 0 0 0 7891500 0 0 0 0 0 97 3444 89 924;925;926;927;928;929;930 851;852;853;854;855;856;857 853 7 AAAGVVSGK Acetyl (Protein N-term) 800.43922 0.43921744 3485 Q8TC07 TBC1D15 TBC1 domain family member 15 yes yes 1 0 0 By MS/MS 1 0 1 1 102.56 107.83 2 0.0097659 87708 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 60.074 30.698 25159000 25159000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 98 3485 90 931 858 858 1 AAAGYPDPYSR Unmodified 1166.5356 0.53563702 1802 P58107 EPPK1 Epiplakin yes yes 0 0 0 By MS/MS 10 0 1 1 38.394 37.924 2 0.042809 42443 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 36.381 21.606 2763500 0 0 0 0 2763500 0 0 0 0 0 0 0 0 0 0 99 1802 91 932 859 859 1 AAAIGIDLGTTYSCVGVFQHGK Unmodified 2264.126 0.12595216 908 P0DMV9;P0DMV8 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 0 0 0 By MS/MS By MS/MS 3 0 2 1 1 87.035 83.633 3 0.0044881 100280 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 30.969 22.15 6064900 3902200 2162700 0 0 0 0 0 0 0 0 0 0 0 0 0 100 908 92 933;934 860;861 861 2 AAAISTSRVLTQEDFQK Unmodified 1863.969 0.96904081 4684 Q9NVU7 SDAD1 Protein SDA1 homolog yes yes 0 0 1 By MS/MS 2 0 1 1 67.918 59.623 3 0.0070288 79835 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 34.395 24.98 9349100 9349100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 101 4684 93 935 862 862 1 AAAITDMADLEELSR Acetyl (Protein N-term) 1646.7822 0.78215124 3000 Q6ZN18 AEBP2 Zinc finger protein AEBP2 yes yes 1 0 0 By MS/MS By MS/MS 10 0 2 1 1 96.688 96.864 2 4.2253E-10 112488 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.86 96.166 2700800 0 0 0 0 0 0 0 458970 0 0 0 0 0 0 2241800 102 3000 94 936;937 863;864 863 2 AAALEAMK Oxidation (M) 819.41604 0.41603916 1313 P31948 STIP1 Stress-induced-phosphoprotein 1 yes yes 0 1 0 By matching By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 13.098 9.8543 2 0.03336 12265 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 71.342 38.413 1018500000 80125000 913820000 24569000 0 0 0 0 0 0 0 0 0 0 0 0 103 1313 95 938;939;940;941 865;866;867;868;869;870 866 6 AAALEAMK Unmodified 803.42112 0.42112454 1313 P31948 STIP1 Stress-induced-phosphoprotein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.83 3.67 3 1 2 1 2 1 1 1 29.146 26.356 2 0.028816 35747 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.282 47.944 3614200000 88085000 3365000000 31957000 0 0 0 0 0 0 0 49439000 0 0 0 79678000 104 1313 95 942;943;944;945;946;947 871;872;873;874;875;876;877 873 5 AAALEEHNAAMK Unmodified 1254.6027 0.60267073 3629 Q92574 TSC1 Hamartin yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 23.099 19.654 2 0.00032829 26138 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.4 91.661 10690000 0 5846400 4843400 0 0 0 0 0 0 0 0 0 0 0 0 105 3629 96 948;949 878 878 1 AAALEFLNR Unmodified 1003.5451 0.5450795 1313 P31948 STIP1 Stress-induced-phosphoprotein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 69.772 70.099 2 0.018695 79760 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.611 43.92 29716000 0 0 0 0 0 0 0 0 0 0 4547900 7670800 0 4272500 13224000 106 1313 97 950;951;952;953 879;880 879 2 AAALEFLNRFEEAK Unmodified 1607.8308 0.83075641 1313 P31948 STIP1 Stress-induced-phosphoprotein 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS 7.44 3.62 2 1 6 1 2 1 1 1 1 2 85.425 83.673 2;3 1.6043E-48 96073 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 176.05 157.78 189840000 29975000 68372000 0 871430 0 0 1771100 0 0 0 7305800 0 0 6528100 75019000 107 1313 98 954;955;956;957;958;959;960;961;962 881;882;883;884;885;886 883 6 AAALGASGGAGAGDDDFDQFDKPGAER Acetyl (Protein N-term) 2607.1474 0.14735212 3823 Q96EV2 RBM33 RNA-binding protein 33 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.23 77.288 3 1.4122E-126 89334 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 162.77 159.18 229860000 0 0 0 9709200 21310000 15435000 18987000 19209000 14827000 15057000 18455000 23595000 15746000 16852000 40674000 108 3823 99 963;964;965;966;967;968;969;970;971;972;973;974 887;888;889;890;891;892;893;894;895;896;897;898;899;900;901;902 893 16 AAALGGPEDEPGAAEAHFLPR Unmodified 2075.0072 0.007217228 2858 Q68DK7 MSL1 Male-specific lethal 1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 73.065 73.273 3 2.0485E-09 84463 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 73.783 70.179 91570000 0 0 0 0 0 0 5699000 11157000 7556400 16142000 12226000 18202000 0 8213200 12375000 109 2858 100 975;976;977;978;979;980;981;982;983 903;904;905;906;907;908;909;910;911 906 9 AAALQALQAQAPTSPPPPPPPLK Unmodified 2260.258 0.25795261 3382 Q8NAF0 ZNF579 Zinc finger protein 579 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 80.423 80.505 3 0.0030695 93449 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 28.393 24.953 26867000 0 0 0 0 1971900 0 0 1992200 0 0 0 10941000 2828400 3132900 6000800 110 3382 101 984;985;986;987;988;989 912;913;914;915 914 4 AAAMANNLQK Oxidation (M) 1046.5179 0.51787847 2410 Q14498 RBM39 RNA-binding protein 39 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 8.5331 8.6578 2 0.0003797 6155 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 130 86.755 148970000 0 0 0 12246000 11350000 9949600 11960000 7119000 8003000 0 23608000 23365000 19500000 10734000 11131000 111 2410 102 990;991;992;993;994;995;996;997;998;999;1000;1001 916;917;918;919;920;921;922;923;924;925;926;927 921 3950 9 AAAMANNLQK Unmodified 1030.523 0.52296385 2410 Q14498 RBM39 RNA-binding protein 39 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.475 19.673 2 1.0012E-09 20515 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 150.17 113.32 574770000 0 0 0 32612000 32217000 36497000 29461000 40042000 23895000 67499000 72005000 71480000 54222000 45774000 69069000 112 2410 102 1002;1003;1004;1005;1006;1007;1008;1009;1010;1011;1012;1013 928;929;930;931;932;933;934;935;936;937;938;939 928 6 AAAMDVDTPSGTNSGAGK Acetyl (Protein N-term);Oxidation (M) 1706.7417 0.74174299 1923 P62877 RBX1 E3 ubiquitin-protein ligase RBX1;E3 ubiquitin-protein ligase RBX1, N-terminally processed yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.17 4.02 3 3 12 4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43.346 43.828 2;3 2.3703E-88 53712 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 198.49 192.64 249210000 83209000 0 1292500 6243800 5218800 16285000 10219000 5445900 8129200 11107000 22301000 21063000 10511000 15466000 32723000 113 1923 103 1014;1015;1016;1017;1018;1019;1020;1021;1022;1023;1024;1025;1026;1027;1028;1029;1030;1031 940;941;942;943;944;945;946;947;948;949;950;951;952;953;954;955;956;957;958;959;960;961;962 948 3101 23 AAAMDVDTPSGTNSGAGK Acetyl (Protein N-term) 1690.7468 0.74682837 1923 P62877 RBX1 E3 ubiquitin-protein ligase RBX1;E3 ubiquitin-protein ligase RBX1, N-terminally processed yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.88 3.69 2 2 12 3 1 1 1 1 1 1 1 1 1 1 1 1 1 57.673 57.578 2;3 7.5337E-84 58120 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 230.59 218.02 573640000 154330000 15659000 0 15949000 13697000 30680000 17853000 23245000 13115000 28707000 54608000 54072000 25273000 35680000 90772000 114 1923 103 1032;1033;1034;1035;1036;1037;1038;1039;1040;1041;1042;1043;1044;1045;1046;1047 963;964;965;966;967;968;969;970;971;972;973;974;975;976;977;978;979;980 973 18 AAAMDVDTPSGTNSGAGKK Acetyl (Protein N-term);Oxidation (M) 1834.8367 0.83670601 1923 P62877 RBX1 E3 ubiquitin-protein ligase RBX1;E3 ubiquitin-protein ligase RBX1, N-terminally processed yes yes 1 1 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.31 2.4 1 12 1 1 1 2 2 1 2 1 1 1 34.137 34.765 2;3 1.9254E-48 30165 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 133.71 125.2 95116000 29811000 0 0 3174600 2280100 0 12061000 0 0 8605200 9468700 13039000 3850400 4381400 8443100 115 1923 104 1048;1049;1050;1051;1052;1053;1054;1055;1056;1057;1058;1059;1060 981;982;983;984;985;986;987;988 986 3101 8 AAAMDVDTPSGTNSGAGKK Acetyl (Protein N-term) 1818.8418 0.84179138 1923 P62877 RBX1 E3 ubiquitin-protein ligase RBX1;E3 ubiquitin-protein ligase RBX1, N-terminally processed yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 42.795 43.059 2 7.6829E-65 47717 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 170.18 152.37 68331000 0 0 0 0 4505000 0 4654700 4776200 0 7434500 13179000 11796000 0 7146100 14840000 116 1923 104 1061;1062;1063;1064;1065;1066;1067;1068 989;990;991;992;993;994;995;996 995 8 AAAMTPPEEELK Oxidation (M) 1301.6173 0.61731774 2484 Q15042 RAB3GAP1 Rab3 GTPase-activating protein catalytic subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 33.69 34.087 2 1.7765E-05 37347 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 95.502 80.835 53541000 0 0 0 0 0 0 5069000 0 0 6478500 10495000 11227000 6126000 5642700 8502300 117 2484 105 1069;1070;1071;1072;1073;1074;1075 997;998;999;1000;1001;1002 997 4093 6 AAAMTPPEEELK Unmodified 1285.6224 0.62240312 2484 Q15042 RAB3GAP1 Rab3 GTPase-activating protein catalytic subunit yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 47.554 47.674 2 0.0024543 53694 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 63.076 42.772 41598000 0 0 0 0 3897300 8181200 3640500 0 0 7459200 0 0 0 6131900 12287000 118 2484 105 1076;1077;1078;1079;1080;1081 1003;1004 1003 2 AAAMVPGR Acetyl (Protein N-term);Oxidation (M) 829.41162 0.41162248 345 O43598 DNPH1 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 yes yes 1 1 0 By MS/MS 10 0 1 1 31.056 31.765 2 0.025669 33653 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.163 35.87 32559000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32559000 119 345 106 1082 1005 1005 0 AAANFSDR Unmodified 850.39333 0.39332988 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 13.527 13.674 2 0.0082674 12276 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.794 55.504 89178000 0 0 0 5813900 5050200 6468800 6194000 0 5267300 10017000 11430000 14889000 10219000 0 13829000 120 19 107 1083;1084;1085;1086;1087;1088;1089;1090;1091;1092 1006;1007;1008;1009;1010;1011;1012;1013 1008 8 AAANFSDRSLLK Unmodified 1291.6884 0.68844927 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 0 1 By MS/MS 2 0 2 2 57.455 49.275 2;3 0.00010249 67232 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.45 71.008 69444000 69444000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 121 19 108 1093;1094 1014;1015 1015 1 AAAPAEGPPGGIQPEAAEPKPTAEAPK Unmodified 2551.2918 0.29183151 2972 Q6UB99 ANKRD11 Ankyrin repeat domain-containing protein 11 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 54.594 54.691 3 3.9267E-14 62326 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 55.061 47.785 90441000 0 0 0 7191100 5048600 5249700 8968300 6469800 5671600 14551000 0 14189000 13105000 0 9996000 122 2972 109 1095;1096;1097;1098;1099;1100;1101;1102;1103;1104 1016;1017;1018;1019;1020;1021;1022;1023;1024;1025 1022 10 AAAPAPEEEMDECEQALAAEPK Oxidation (M) 2372.0148 0.014806305 1211 P26641 EEF1G Elongation factor 1-gamma yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.09 2.55 1 3 1 39 4 1 4 4 3 4 3 3 4 2 3 3 3 3 57.424 56.988 2;3 1.4796E-73 63299 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 131.18 130.1 1420800000 348520000 43046000 0 55164000 50053000 105050000 83125000 40352000 32278000 125490000 70849000 145330000 65679000 78503000 177320000 123 1211 110 1105;1106;1107;1108;1109;1110;1111;1112;1113;1114;1115;1116;1117;1118;1119;1120;1121;1122;1123;1124;1125;1126;1127;1128;1129;1130;1131;1132;1133;1134;1135;1136;1137;1138;1139;1140;1141;1142;1143;1144;1145;1146;1147;1148 1026;1027;1028;1029;1030;1031;1032;1033;1034;1035;1036;1037;1038;1039;1040;1041;1042;1043;1044;1045;1046;1047;1048;1049;1050;1051 1043 1776 25 AAAPAPEEEMDECEQALAAEPK Unmodified 2356.0199 0.019891683 1211 P26641 EEF1G Elongation factor 1-gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.68 4 3 2 24 5 4 2 2 2 2 2 2 2 2 2 2 2 2 77.145 76.695 2;3 3.4885E-141 92809 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 164.94 163.3 3035200000 865810000 771200000 0 35202000 57527000 152180000 60293000 66729000 40504000 181300000 154480000 117780000 64670000 116990000 350550000 124 1211 110 1149;1150;1151;1152;1153;1154;1155;1156;1157;1158;1159;1160;1161;1162;1163;1164;1165;1166;1167;1168;1169;1170;1171;1172;1173;1174;1175;1176;1177;1178;1179;1180;1181 1052;1053;1054;1055;1056;1057;1058;1059;1060;1061;1062;1063;1064;1065;1066;1067;1068;1069;1070;1071;1072;1073;1074;1075;1076;1077;1078;1079 1063 25 AAAPAPVSEAVCR Unmodified 1297.6449 0.6448699 1113 P20810 CAST Calpastatin yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching 10 0 5 1 1 1 1 1 42.397 42.874 2 0.0010595 47785 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 65.627 51.624 84053000 0 0 0 0 0 0 0 7853800 0 0 14577000 23870000 0 14190000 23563000 125 1113 111 1182;1183;1184;1185;1186 1080;1081 1081 2 AAAPGVEDEPLLR Unmodified 1336.6987 0.69867961 1301 P31350 RRM2 Ribonucleoside-diphosphate reductase subunit M2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.396 62.493 2 0.00072561 71888 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 87.298 75.705 317230000 0 0 0 16330000 16945000 21482000 23136000 18069000 14174000 25979000 38480000 35503000 26820000 29405000 50910000 126 1301 112 1187;1188;1189;1190;1191;1192;1193;1194;1195;1196;1197;1198 1082;1083;1084;1085;1086;1087;1088;1089;1090;1091;1092;1093;1094;1095 1095 14 AAAPGVEDEPLLRENPR Unmodified 1832.9381 0.93807503 1301 P31350 RRM2 Ribonucleoside-diphosphate reductase subunit M2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 57.514 57.915 3 3.6321E-07 65081 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.107 58.049 34487000 0 0 0 0 0 0 0 0 0 0 0 0 0 11301000 23186000 127 1301 113 1199;1200;1201 1096;1097;1098;1099 1097 4 AAAPGVEDEPLLRENPRR Unmodified 1989.0392 0.039186058 1301 P31350 RRM2 Ribonucleoside-diphosphate reductase subunit M2 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 50.28 50.385 3;4 7.0367E-06 57168 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 75.463 61.477 193750000 0 0 0 30171000 0 0 36934000 29503000 0 0 0 0 0 54847000 42298000 128 1301 114 1202;1203;1204;1205;1206 1100;1101;1102;1103;1104;1105 1103 5 AAAPPLRDR Acetyl (Protein N-term) 1007.5512 0.55122751 3931 Q96N21 ENTHD2 AP-4 complex accessory subunit tepsin yes yes 1 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 34.126 34.297 2 0.016336 37047 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 63.48 21.371 167450000 0 0 0 12143000 11594000 9479900 13298000 9809800 8790900 13536000 25309000 34565000 18257000 0 10669000 129 3931 115 1207;1208;1209;1210;1211;1212;1213;1214;1215;1216;1217 1106;1107 1107 0 AAAPQAPGR Acetyl (Protein N-term) 879.45626 0.45626449 1975 P78345 RPP38 Ribonuclease P protein subunit p38 yes yes 1 0 0 By matching By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 25.962 26.368 2 0.0041254 27823 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.799 33.482 24859000 0 0 0 0 0 0 0 2106900 0 4692400 0 9782700 4245100 0 4031900 130 1975 116 1218;1219;1220;1221;1222 1108;1109;1110 1110 3 AAAQEADGAR Acetyl (Protein N-term) 1000.4574 0.4573867 711 O96005 CLPTM1 Cleft lip and palate transmembrane protein 1 yes yes 1 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 17.718 17.896 2 0.00089637 17917 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 80.219 65.55 113640000 0 0 0 7464000 8715300 8660700 8885100 11097000 7603900 9463100 11747000 15042000 13958000 0 11005000 131 711 117 1223;1224;1225;1226;1227;1228;1229;1230;1231;1232;1233 1111;1112;1113;1114;1115;1116;1117;1118;1119;1120;1121 1116 11 AAAQQLGEVVK Unmodified 1112.619 0.61897272 238 O14981 BTAF1 TATA-binding protein-associated factor 172 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 42.604 42.011 2 0.00026662 46709 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 92.051 64.797 319980000 0 209200000 0 6845200 5397200 11799000 8650600 8640000 8016800 9750500 10187000 10986000 10391000 7377100 12735000 132 238 118 1234;1235;1236;1237;1238;1239;1240;1241;1242;1243;1244;1245;1246;1247 1122;1123;1124;1125;1126;1127;1128;1129;1130;1131;1132;1133;1134;1135;1136;1137 1123 15 AAAQYYLGNFR Unmodified 1272.6251 0.62512073 692 O95801 TTC4 Tetratricopeptide repeat protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 68.627 68.865 2 0.0086147 78941 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 51.346 36.679 36313000 0 0 0 0 0 0 3754000 2875000 0 6250500 4655300 0 0 5398900 13379000 133 692 119 1248;1249;1250;1251;1252;1253 1138;1139;1140;1141;1142 1140 5 AAARDVTLENRLQNMEVTDA Unmodified 2216.0855 0.085543903 1580 P49591 SARS Serine--tRNA ligase, cytoplasmic yes yes 0 0 2 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 76.271 70.965 3 1.7256E-07 91169 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.684 54.083 219030000 145080000 62213000 11736000 0 0 0 0 0 0 0 0 0 0 0 0 134 1580 120 1254;1255;1256 1143;1144;1145 1144 3 AAARDVTLENRLQNMEVTDA Oxidation (M) 2232.0805 0.080458526 1580 P49591 SARS Serine--tRNA ligase, cytoplasmic yes yes 0 1 2 By MS/MS By MS/MS 2 0 3 1 2 61.217 55.929 3 0.0012756 70034 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 57.989 54.98 69576000 36075000 0 33502000 0 0 0 0 0 0 0 0 0 0 0 0 135 1580 120 1257;1258;1259 1146;1147 1147 2546 2 AAASAALELPLGPAPVSVAPQAEAEAR Unmodified 2556.3548 0.35476612 1792 P57086 SCAND1 SCAN domain-containing protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 88.763 88.876 3 0.00068143 103107 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 16.621 15.477 2016200 0 0 0 0 0 0 0 0 0 2016200 0 0 0 0 0 136 1792 121 1260 1148 1148 1 AAASGNENIQPPPLAYK Unmodified 1739.8842 0.88424855 4370 Q9H2M9 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 63.498 62.974 2 0.0060424 79097 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 51.454 35.564 75763000 0 28786000 0 0 2497300 5085500 3974400 4073500 0 0 0 8172100 9059200 6653400 7462000 137 4370 122 1261;1262;1263;1264;1265;1266;1267;1268;1269 1149;1150;1151;1152 1150 3 AAASGQPRPEMQCPAEHEEDMYRAADEIEK Unmodified 3415.4867 0.48673764 3761 Q96BN8 OTULIN Ubiquitin thioesterase otulin yes yes 0 0 2 By MS/MS 2 0 1 1 65.319 61.566 5 0.00047373 76420 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 31.632 29.542 7596000 0 0 7596000 0 0 0 0 0 0 0 0 0 0 0 0 138 3761 123 1270 1153 1153 1 AAASGYTDLREK Acetyl (Protein N-term) 1322.6466 0.64664404 2939 Q6P6C2 ALKBH5 RNA demethylase ALKBH5 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.08 3.33 2 1 9 1 2 1 1 1 1 1 1 2 1 44.915 43.585 2 1.3765E-14 52523 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 142 132.29 157360000 0 114310000 0 6709700 5886800 0 7988900 7496200 8903700 0 6058300 0 0 0 0 139 2939 124 1271;1272;1273;1274;1275;1276;1277;1278;1279;1280;1281;1282 1154;1155;1156;1157;1158;1159;1160;1161;1162;1163;1164;1165 1158 11 AAASLAAVSGTAAASLGSAQPTDLGAHK Unmodified 2493.2823 0.28232946 3108 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.952 77.012 3 4.9246E-119 88452 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.78 103.67 393630000 0 0 0 4997700 16352000 18847000 15662000 26416000 17786000 46356000 54854000 44142000 12606000 28064000 107540000 140 3108 125 1283;1284;1285;1286;1287;1288;1289;1290;1291;1292;1293;1294 1166;1167;1168;1169;1170;1171;1172;1173;1174;1175;1176;1177 1169 12 AAASLSQPEEEQK Unmodified 1386.6627 0.66268803 5041 Q9UNS1 TIMELESS Protein timeless homolog yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 22.659 22.766 2 0.00056177 23903 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 97.813 84.011 125450000 0 0 0 5977200 11097000 7794600 5563800 7033700 0 0 12023000 0 28468000 47497000 0 141 5041 126 1295;1296;1297;1298;1299;1300;1301;1302 1178;1179;1180 1180 3 AAASLVSREESK Unmodified 1246.6517 0.65172941 2880 Q6GYQ0 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 18.804 19.115 3 0.046986 19224 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 50.149 50.149 33856000 0 0 0 3545200 0 0 0 2706300 0 5205700 3569900 6128000 3737000 3202200 5761900 142 2880 127 1303;1304;1305;1306;1307;1308;1309;1310 1181 1181 0 AAASPLRDCQAWK Acetyl (Protein N-term) 1514.73 0.72999651 2753 Q5R3I4 TTC38 Tetratricopeptide repeat protein 38 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 61.615 62.002 2 3.9575E-12 78402 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.74 92.262 10354000 0 0 0 0 0 0 0 0 0 0 0 0 0 2412800 7940800 143 2753 128 1311;1312;1313 1182;1183;1184 1182 3 AAASVTPPGSLELLQPGFSK Acetyl (Protein N-term) 2011.0626 0.062606842 2211 Q12933 TRAF2 TNF receptor-associated factor 2 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS 8.94 2.82 1 1 14 1 1 2 1 2 1 1 1 1 2 1 1 1 94.476 94.583 2;3 1.3024E-99 112952 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 170.79 155.03 78674000 20303000 19419000 0 0 3275100 2245100 3329300 2177600 1802800 4063300 3895200 7839300 2187900 2853100 5282400 144 2211 129 1314;1315;1316;1317;1318;1319;1320;1321;1322;1323;1324;1325;1326;1327;1328;1329 1185;1186;1187;1188;1189;1190;1191 1186 7 AAATAEEPDPK Unmodified 1098.5193 0.51931826 4057 Q99733 NAP1L4 Nucleosome assembly protein 1-like 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.28 3.87 2 3 1 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 24.246 23.957 2 0.00046394 92834 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 102.55 59.947 865830000 190040000 158090000 2237700 23595000 22275000 20228000 23633000 22339000 20459000 33541000 63056000 69963000 52931000 50015000 113420000 145 4057 130 1330;1331;1332;1333;1334;1335;1336;1337;1338;1339;1340;1341;1342;1343;1344;1345;1346;1347 1192;1193;1194;1195;1196;1197;1198;1199;1200;1201;1202;1203;1204;1205;1206;1207;1208;1209;1210 1200 19 AAATELNRPSSGDR Acetyl (Protein N-term) 1485.7172 0.71718322 4618 Q9NS73 MBIP MAP3K12-binding inhibitory protein 1 yes yes 1 0 1 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 34.497 34.686 2 0.0028094 37612 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 50.108 29.237 84084000 0 0 0 6227100 7418100 0 4382600 2971700 4590300 10221000 16807000 18519000 5089900 0 7858500 146 4618 131 1348;1349;1350;1351;1352;1353;1354;1355;1356;1357 1211 1211 1 AAATGAVAASAASGQAEGK Acetyl (Protein N-term) 1629.7958 0.79582747 4697 Q9NWH9 SLTM SAFB-like transcription modulator yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.31 2.4 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 55.871 56.408 2 1.7331E-198 59182 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 219.35 195.26 357310000 26255000 0 0 21832000 23970000 20517000 32991000 27944000 18776000 28063000 22437000 23964000 22140000 19749000 68678000 147 4697 132 1358;1359;1360;1361;1362;1363;1364;1365;1366;1367;1368;1369;1370 1212;1213;1214;1215;1216;1217;1218;1219;1220;1221;1222;1223;1224;1225 1213 14 AAATGDPGLSK Acetyl (Protein N-term) 1028.5138 0.51383895 644 O95352 ATG7 Ubiquitin-like modifier-activating enzyme ATG7 yes yes 1 0 0 By MS/MS 1.67 0.471 1 2 3 100.71 105.97 2 0.0021464 85647 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 67.704 50.236 9597800 9597800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 148 644 133 1371;1372;1373 1226;1227;1228 1226 3 AAATGPSFWLGNETLK Acetyl (Protein N-term) 1703.8519 0.85188578 972 P12955 PEPD Xaa-Pro dipeptidase yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 93.182 92.266 2 6.7814E-24 112229 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 167.83 150.36 410720000 0 390550000 0 0 0 0 0 0 0 2316200 2628300 3255800 900320 2312100 8762400 149 972 134 1374;1375;1376;1377;1378;1379;1380;1381;1382 1229;1230;1231;1232;1233;1234;1235;1236;1237 1230 9 AAATIDSLASR Unmodified 1074.5669 0.56693715 4664 Q9NVC6 MED17 Mediator of RNA polymerase II transcription subunit 17 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 42.647 42.64 2 0.002544 47270 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 67.207 39.324 48769000 0 0 0 5339800 5547500 5975600 0 7269000 5176500 7880500 11580000 0 0 0 0 150 4664 135 1383;1384;1385;1386;1387;1388;1389;1390;1391 1238;1239;1240;1241;1242;1243;1244 1241 7 AAATPESQEPQAK Unmodified 1326.6416 0.64155866 1557 P49006 MARCKSL1 MARCKS-related protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.28 3.87 2 3 1 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 24.584 24.297 2 2.1929E-22 92580 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 180.09 157.35 1840200000 99236000 100220000 2313300 57014000 74747000 67172000 56791000 68235000 50172000 225410000 443650000 225150000 78783000 128390000 162920000 151 1557 136 1392;1393;1394;1395;1396;1397;1398;1399;1400;1401;1402;1403;1404;1405;1406;1407;1408;1409 1245;1246;1247;1248;1249;1250;1251;1252;1253;1254;1255;1256;1257;1258;1259;1260;1261 1252 17 AAAVAMETDDAGNRLR Acetyl (Protein N-term) 1701.8104 0.81043168 5158 Q9Y3C7 MED31 Mediator of RNA polymerase II transcription subunit 31 yes yes 1 0 1 By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 68.345 68.378 2 0.00016309 77837 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.067 56.041 31717000 0 0 0 1307700 1814200 0 2044100 3145900 1696800 0 6819400 0 3504300 0 11385000 152 5158 137 1410;1411;1412;1413;1414;1415;1416;1417 1262;1263 1262 2 AAAVAVAAASR Acetyl (Protein N-term) 998.55089 0.55089316 3108 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 1 2 2 2 2 2 2 67.935 68.013 1;2 0.00015935 77989 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 83.456 57.014 298500000 0 0 0 17174000 15963000 17305000 21019000 17616000 5055600 32502000 35755000 34815000 26491000 25811000 48996000 153 3108 138 1418;1419;1420;1421;1422;1423;1424;1425;1426;1427;1428;1429;1430;1431;1432;1433;1434;1435;1436;1437;1438;1439;1440 1264;1265;1266;1267;1268;1269;1270;1271;1272;1273;1274;1275;1276;1277 1265 12 AAAVAVAAASRR Acetyl (Protein N-term) 1154.652 0.65200419 3108 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 61.986 62.135 2 2.5699E-07 70781 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 100.02 47.527 267230000 0 0 0 15087000 0 23250000 24255000 24141000 18784000 32270000 42680000 37716000 0 0 49045000 154 3108 139 1441;1442;1443;1444;1445;1446;1447;1448;1449 1278;1279;1280;1281;1282;1283;1284;1285;1286;1287 1286 8 AAAVDPTPAAPAR Unmodified 1206.6357 0.63568542 2755 Q5SQI0 ATAT1 Alpha-tubulin N-acetyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 31.099 31.307 2 0.004793 33582 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 50.034 33.831 25964000 0 0 0 1940700 0 0 4116100 3531000 0 0 5198700 11177000 0 0 0 155 2755 140 1450;1451;1452;1453;1454 1288 1288 1 AAAVGTANK Unmodified 801.43447 0.43446642 1073 P18206 VCL Vinculin yes yes 0 0 0 By MS/MS By MS/MS 1.67 0.471 1 2 2 1 39.506 39.055 2 0.0047926 93299 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 113.5 73.401 495220000 208130000 287100000 0 0 0 0 0 0 0 0 0 0 0 0 0 156 1073 141 1455;1456;1457 1289;1290 1290 2 AAAVLSGPSAGSAAGVPGGTGGLSAVSSGPR Acetyl (Protein N-term) 2607.3253 0.3252569 3296 Q8IZL8 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 1 1 2 1 2 2 85.059 85.172 2;3 1.0416E-128 98445 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 101.88 94.765 698340000 0 0 0 0 49366000 41740000 38417000 47918000 34530000 63773000 59388000 89516000 77384000 81142000 115170000 157 3296 142 1458;1459;1460;1461;1462;1463;1464;1465;1466;1467;1468;1469;1470;1471 1291;1292;1293;1294;1295;1296;1297;1298;1299;1300;1301;1302 1295 12 AAAVPQRAWTVEQLRSEQLPK Acetyl (Protein N-term) 2419.2972 0.29719166 2043 Q00688 FKBP3 Peptidyl-prolyl cis-trans isomerase FKBP3 yes yes 1 0 2 By MS/MS 2 0 1 1 84.805 76.674 3 0.0001473 100105 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 44.089 30.497 11823000 11823000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 158 2043 143 1472 1303 1303 1 AAAVPVEFQEHHLSEVQNMASEEK Unmodified 2679.2599 0.25987945 374 O43837 IDH3B Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 74.531 71.684 4 0.00134 87466 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 38.724 36.001 3777800 0 0 3777800 0 0 0 0 0 0 0 0 0 0 0 0 159 374 144 1473 1304 1304 1 AAAVRQDLAQLMNSSGSHK Acetyl (Protein N-term);Oxidation (M) 2041.0011 0.0010859926 4137 Q9BT78 COPS4 COP9 signalosome complex subunit 4 yes yes 1 1 1 By MS/MS 2 0 1 1 82.803 74.673 3 0.00017571 97915 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.957 14.831 31929000 31929000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 160 4137 145 1474 1305 1305 5620 1 AAAVSSVVR Acetyl (Protein N-term) 900.50288 0.50288033 25 A6NDU8 C5orf51 UPF0600 protein C5orf51 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 62.429 62.566 2 0.0012372 70398 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 100.39 72.904 194930000 0 0 0 0 11943000 24079000 20097000 17175000 11593000 0 30533000 0 19724000 17843000 41946000 161 25 146 1475;1476;1477;1478;1479;1480;1481;1482;1483 1306;1307;1308;1309;1310;1311;1312;1313;1314 1312 9 AAAYLDPNLNHTPNSSTK Acetyl (Protein N-term) 1954.9385 0.93846896 2114 Q05397 PTK2 Focal adhesion kinase 1 yes yes 1 0 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 71.52 71.233 2;3 3.7506E-06 88081 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.82 63.727 206570000 0 139030000 0 0 3295400 4740800 5124500 4222200 4451500 6760200 7762900 10199000 4249600 7093200 9647400 162 2114 147 1484;1485;1486;1487;1488;1489;1490;1491;1492;1493;1494;1495 1315;1316;1317;1318 1317 4 AAAYLSEAMK Unmodified 1053.5165 0.51648149 3832 Q96F24 NRBF2 Nuclear receptor-binding factor 2 yes yes 0 0 0 By MS/MS 2 0 1 1 53.657 47.864 2 0.0073407 61936 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.455 52.246 42641000 0 42641000 0 0 0 0 0 0 0 0 0 0 0 0 0 163 3832 148 1496 1319 1319 1 AACLESAQEPSGAWGNK Unmodified 1774.7944 0.79444726 2033 Q00341 HDLBP Vigilin yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 50.521 45.2 2 1.0388E-62 58539 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 162.68 149.1 26686000 0 26686000 0 0 0 0 0 0 0 0 0 0 0 0 0 164 2033 149 1497;1498 1320;1321;1322;1323 1320 4 AACNLLQR Unmodified 944.48618 0.48618441 2064 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type yes yes 0 0 0 By matching By MS/MS By matching 10 0 3 1 1 1 33.396 33.855 2 0.0052037 37092 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 107.74 72.639 41309000 0 0 0 0 0 0 0 0 0 0 0 26949000 8622200 5737900 0 165 2064 150 1499;1500;1501 1324 1324 1 AADAEAEVASLNR Unmodified 1315.6368 0.63680763 831 P06753 TPM3 Tropomyosin alpha-3 chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 40.072 40.253 2 4.9737E-09 44221 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 135.86 95.857 230420000 0 0 0 16100000 7520500 8290300 9709100 0 6844200 15342000 34486000 38997000 17664000 29008000 46457000 166 831 151 1502;1503;1504;1505;1506;1507;1508;1509;1510;1511;1512 1325;1326;1327;1328;1329;1330;1331;1332;1333;1334;1335 1333 11 AADAEAEVASLNRR Unmodified 1471.7379 0.73791866 831 P06753 TPM3 Tropomyosin alpha-3 chain yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 2 1 1 1 1 1 1 1 35.781 35.962 3 3.088E-15 38212 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.531 85.33 1701000000 0 0 0 100960000 76805000 59165000 75625000 78304000 55668000 82688000 242960000 230920000 114620000 203810000 379480000 167 831 152 1513;1514;1515;1516;1517;1518;1519;1520;1521;1522;1523;1524;1525 1336;1337;1338;1339;1340;1341;1342;1343;1344;1345;1346;1347 1339 12 AADALEEQQR Unmodified 1129.5364 0.53636531 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 16.856 17.106 2 0.0081131 16441 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 60.828 43.991 74330000 0 0 0 0 6960100 0 7910000 0 0 6256100 8846300 12087000 12275000 8253300 11742000 168 2459 153 1526;1527;1528;1529;1530;1531;1532;1533 1348;1349;1350;1351 1349 4 AADCDLQITNAQTK Unmodified 1547.725 0.72497071 3111 Q7Z6E9 RBBP6 E3 ubiquitin-protein ligase RBBP6 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 40.209 40.304 2 7.0397E-08 43770 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 94.616 84.663 25105000 0 0 0 3244200 0 0 3711200 5274100 0 0 5637700 0 0 7237500 0 169 3111 154 1534;1535;1536;1537;1538 1352;1353;1354 1354 3 AADCEVEQWDSDEPIPAK Unmodified 2058.8841 0.88405013 4852 Q9UBQ7 GRHPR Glyoxylate reductase/hydroxypyruvate reductase yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 67.46 67.872 2 8.3278E-15 77206 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 119.39 113.89 16823000 0 0 0 0 0 0 0 0 0 0 6887100 0 0 0 9936300 170 4852 155 1539;1540 1355 1355 1 AADDTWEPFASGK Unmodified 1393.615 0.61500956 761 P02766 TTR Transthyretin yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 67.025 66.777 2 4.7101E-09 76385 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 112.13 94.265 12870000 0 0 0 3190800 0 0 0 9679600 0 0 0 0 0 0 0 171 761 156 1541;1542 1356;1357 1356 2 AADEAMEER Unmodified 1020.4182 0.418224 4727 Q9NXH9 TRMT1 tRNA (guanine(26)-N(2))-dimethyltransferase yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 12.085 12.304 2 0.0058337 10517 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.679 51.785 18500000 0 0 0 0 895330 0 0 900120 657390 1892400 1825800 3019800 1614000 1896100 5799000 172 4727 157 1543;1544;1545;1546;1547;1548;1549;1550;1551 1358;1359;1360;1361;1362 1359 5 AADEEAFEDNSEEYIR Unmodified 1886.7806 0.78063091 1754 P55060 CSE1L Exportin-2 yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 62.383 62.491 2 2.1855E-27 71383 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 129.84 116.41 39606000 0 0 0 1651400 0 6956300 2851200 2855500 0 5522500 6487200 0 0 5120400 8161700 173 1754 158 1552;1553;1554;1555;1556;1557;1558;1559 1363;1364;1365;1366 1363 4 AADEEAFEDNSEEYIRR Unmodified 2042.8817 0.88174194 1754 P55060 CSE1L Exportin-2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 2 1 2 2 56.013 56.134 2;3 2.173E-37 63044 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 132.81 123.02 831450000 0 0 0 26566000 19437000 101420000 38334000 60325000 27640000 105740000 53628000 85903000 57893000 79044000 175520000 174 1754 159 1560;1561;1562;1563;1564;1565;1566;1567;1568;1569;1570;1571;1572;1573;1574;1575;1576;1577;1578;1579;1580;1581;1582 1367;1368;1369;1370;1371;1372;1373;1374;1375;1376;1377;1378;1379;1380 1370 14 AADESERGMK Unmodified 1092.487 0.48697227 1957;90;853;831;884 CON__Q3SX28;P06753;P07951;P09493;P67936 TPM3;TPM2;TPM1;TPM4 Tropomyosin alpha-3 chain;Tropomyosin beta chain;Tropomyosin alpha-1 chain;Tropomyosin alpha-4 chain no no 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 6.2795 3.2177 2 2.9671E-10 6073 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 162.88 130.94 + 1852400000 235250000 1588600000 28487000 0 0 0 0 0 0 0 0 0 0 0 0 175 90;831;853;884;1957 160 1583;1584;1585;1586 1381;1382;1383;1384 1383 4 AADEVAEGK Unmodified 888.41888 0.41887593 854 P07954 FH Fumarate hydratase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 7.8597 4.4806 2 0.025718 6648 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.256 26.448 107710000 50809000 56900000 0 0 0 0 0 0 0 0 0 0 0 0 0 176 854 161 1587;1588 1385;1386 1385 2 AADEVAGGARK Acetyl (Protein N-term) 1085.5465 0.54653606 2969 Q6STE5 SMARCD3 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.86 3.4 1 1 5 2 1 1 1 1 1 22.65 18.693 2 0.0013997 20944 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.1 58.714 45656000 0 45656000 0 0 0 0 0 0 0 0 0 0 0 0 0 177 2969 162 1589;1590;1591;1592;1593;1594;1595 1387;1388;1389;1390;1391;1392;1393;1394 1394 8 AADFEDLLSGQGFNAHK Unmodified 1818.8537 0.8536767 452 O75061 DNAJC6 Putative tyrosine-protein phosphatase auxilin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 82.226 82.361 3 0.0016577 94891 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 32.341 28.281 23548000 0 0 0 0 0 2790100 0 2461300 2837500 3553700 2926500 3729600 0 5248800 0 178 452 163 1596;1597;1598;1599;1600;1601;1602 1395;1396;1397;1398;1399;1400 1397 6 AADFIDQALAQK Unmodified 1289.6616 0.66156582 1653 P51452 DUSP3 Dual specificity protein phosphatase 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 1 2 1 1 2 1 1 75.612 75.676 2 5.4373E-08 87268 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 145.25 119.31 444710000 0 0 0 20803000 26013000 38190000 32445000 38705000 25756000 50410000 38423000 37730000 31510000 30105000 74625000 179 1653 164 1603;1604;1605;1606;1607;1608;1609;1610;1611;1612;1613;1614;1615;1616 1401;1402;1403;1404;1405;1406;1407;1408;1409;1410;1411;1412 1402 10 AADFIEELSSLFK Unmodified 1468.745 0.7449611 3134 Q86TC9 MYPN Myopalladin yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 102.82 97.35 2 3.2508E-18 122081 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 131.82 109.73 18214000 10680000 7533400 0 0 0 0 0 0 0 0 0 0 0 0 0 180 3134 165 1617;1618;1619 1413;1414;1415 1415 3 AADGGERPLAASPPGTVK Unmodified 1692.8795 0.87949752 690 O95785 WIZ Protein Wiz yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.174 37.353 3 0.00041735 41932 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 51.733 22.757 287260000 0 0 0 17260000 19163000 23269000 18143000 18931000 16719000 30857000 24749000 34341000 33476000 25703000 24648000 181 690 166 1620;1621;1622;1623;1624;1625;1626;1627;1628;1629;1630;1631 1416;1417;1418;1419;1420;1421 1421 6 AADGSLDTQPK Unmodified 1101.5302 0.53021729 1028 P15923 TCF3 Transcription factor E2-alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 2 1 1 1 1 15.562 15.739 2 0.00032092 15596 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 95.523 78.011 103090000 0 0 0 5057800 0 5420500 7340900 7892100 4526700 10311000 15335000 0 9750400 14333000 23121000 182 1028 167 1632;1633;1634;1635;1636;1637;1638;1639;1640;1641;1642 1422;1423;1424;1425;1426;1427;1428;1429;1430 1425 8 AADIDQEVK Unmodified 987.48729 0.48728985 3170 Q86VP6 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.18 3.82 6 11 2 2 2 1 1 1 1 1 1 1 1 1 1 1 21.847 21.264 2 0.0039848 23146 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 88.294 51.319 701970000 82875000 104170000 3796600 22548000 0 70918000 25239000 0 23493000 70490000 63725000 55415000 43041000 57268000 78988000 183 3170 168 1643;1644;1645;1646;1647;1648;1649;1650;1651;1652;1653;1654;1655;1656;1657;1658;1659 1431;1432;1433;1434;1435;1436;1437;1438;1439 1437 9 AADIIDGLRK Unmodified 1070.6084 0.60840804 3994 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a yes yes 0 0 1 By matching By MS/MS 2 0 2 1 1 55.379 49.332 2 0.042049 61978 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 75.378 35.377 17370000 6105300 0 11264000 0 0 0 0 0 0 0 0 0 0 0 0 184 3994 169 1660;1661 1440 1440 0 AADISESSGADCK Acetyl (Protein N-term) 1351.5562 0.55617405 343 O43583 DENR Density-regulated protein yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.08 3.52 1 2 10 2 1 1 1 1 1 1 1 1 1 1 1 40.115 40.284 2 1.5751E-25 63331 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 154.24 148.46 126340000 53844000 0 0 0 0 0 4249800 0 0 3873100 16570000 13932000 0 11222000 22646000 185 343 170 1662;1663;1664;1665;1666;1667;1668;1669;1670;1671;1672;1673;1674 1441;1442;1443;1444;1445;1446;1447;1448;1449;1450;1451;1452;1453;1454;1455;1456;1457;1458;1459;1460;1461 1450 21 AADISLDNLVEGK Unmodified 1343.6933 0.69325988 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.24 3.75 5 1 11 1 4 1 1 1 1 1 1 1 1 1 1 1 1 79.145 77.561 2 4.2539E-18 95670 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 150.04 104.04 765850000 11965000 638410000 3150000 0 3920200 8912800 5228300 4762800 5390100 10914000 10181000 12752000 12385000 16949000 20927000 186 2203 171 1675;1676;1677;1678;1679;1680;1681;1682;1683;1684;1685;1686;1687;1688;1689;1690;1691 1462;1463;1464;1465;1466;1467;1468;1469;1470;1471;1472;1473;1474;1475;1476;1477 1466 16 AADKPADQGAEK Acetyl (Protein N-term) 1241.5888 0.58879481 4467 Q9H9A5 CNOT10 CCR4-NOT transcription complex subunit 10 yes yes 1 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 9.1893 9.3233 2 6.5121E-08 6417 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 118.9 102.76 65441000 0 0 0 957540 4449900 3830800 6139800 5499500 3718000 4142600 12528000 7321700 6898300 4962700 4992000 187 4467 172 1692;1693;1694;1695;1696;1697;1698;1699;1700;1701;1702;1703 1478;1479;1480;1481;1482 1479 5 AADKPADQGAEK Unmodified 1199.5782 0.57823012 4467 Q9H9A5 CNOT10 CCR4-NOT transcription complex subunit 10 yes yes 0 0 1 By MS/MS 3 0 1 1 5.6459 2.2846 3 0.0038852 3697 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 66.989 36.099 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 188 4467 172 1704 1483 1483 1 AADLAHITAR Unmodified 1037.5618 0.56179219 4356 Q9H211 CDT1 DNA replication factor Cdt1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 33.188 33.916 2 0.024578 36636 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 44.863 28.352 17934000 0 0 0 0 0 0 0 0 0 0 0 10674000 0 0 7259600 189 4356 173 1705;1706 1484 1484 1 AADLNGDLTATR Unmodified 1216.6048 0.60477922 2515 Q15293 RCN1 Reticulocalbin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.228 40.419 2 2.5314E-08 44431 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 133.23 95.751 219590000 0 0 0 10800000 9610900 0 9443600 8600100 7720400 14423000 26637000 32825000 15000000 27742000 56792000 190 2515 174 1707;1708;1709;1710;1711;1712;1713;1714;1715;1716;1717;1718 1485;1486;1487;1488;1489;1490;1491;1492;1493;1494;1495;1496;1497 1494 12 AADLNGDLTATREEFTAFLHPEEFEHMK Unmodified 3218.4979 0.49787789 2515 Q15293 RCN1 Reticulocalbin-1 yes yes 0 0 1 By MS/MS By MS/MS 2.25 0.829 1 1 2 2 2 99.705 98.138 4;5 1.0329E-08 115095 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.7 60.531 48454000 14766000 33688000 0 0 0 0 0 0 0 0 0 0 0 0 0 191 2515 175 1719;1720;1721;1722 1498;1499 1498 2 AADLNGDLTATREEFTAFLHPEEFEHMK Oxidation (M) 3234.4928 0.49279252 2515 Q15293 RCN1 Reticulocalbin-1 yes yes 0 1 1 By MS/MS 2 0 1 1 96.561 88.431 3 3.6894E-26 114275 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.274 64.73 18413000 18413000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 192 2515 175 1723 1500 1500 4136 0 AADPPAENSSAPEAEQGGAE Unmodified 1896.7973 0.79734361 1955 P67809 YBX1 Nuclease-sensitive element-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.07 2.62 1 2 24 2 1 2 2 2 2 2 2 2 2 2 2 2 2 31.069 30.287 2;3 6.9828E-62 32665 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 175.01 168.91 4038500000 21417000 0 0 214920000 301370000 271420000 230300000 227670000 199420000 341970000 420260000 531580000 454240000 454210000 369740000 193 1955 176 1724;1725;1726;1727;1728;1729;1730;1731;1732;1733;1734;1735;1736;1737;1738;1739;1740;1741;1742;1743;1744;1745;1746;1747;1748;1749;1750 1501;1502;1503;1504;1505;1506;1507;1508;1509;1510;1511;1512;1513;1514;1515;1516;1517;1518;1519;1520;1521;1522;1523;1524;1525;1526;1527;1528;1529 1523 28 AADPVPSFDESSQDTSEK Unmodified 1908.8225 0.82249573 3958 Q96QE3 ATAD5 ATPase family AAA domain-containing protein 5 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.486 52.629 2 1.7559E-05 58935 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 90.731 88.591 47955000 0 0 0 4318700 2880700 3896500 2659800 2324700 2689400 4411300 5299500 6911900 4900300 3401200 4261100 194 3958 177 1751;1752;1753;1754;1755;1756;1757;1758;1759;1760;1761;1762 1530;1531;1532;1533;1534;1535 1534 6 AADQTTAEQGMR Unmodified 1277.567 0.56701351 3665 Q92805 GOLGA1 Golgin subfamily A member 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 14.534 14.687 2 0.0054225 13511 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.334 46.432 22594000 0 0 0 3689900 2798800 0 2612300 0 0 0 2857300 0 3283400 2192400 5159700 195 3665 178 1763;1764;1765;1766;1767;1768;1769 1536;1537 1536 2 AADQTTAEQGMR Oxidation (M) 1293.5619 0.56192813 3665 Q92805 GOLGA1 Golgin subfamily A member 1 yes yes 0 1 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 6.7986 6.8148 2 0.0095379 4528 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 43.512 39.358 4915000 0 0 0 0 1193700 0 1406500 0 0 0 0 2314700 0 0 0 196 3665 178 1770;1771;1772 1538 1538 5200 1 AADRLPNLSSPSAEGPPGPPSGPAPR Unmodified 2494.2564 0.25644906 431 O60784 TOM1 Target of Myb protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.681 66.765 3 5.5736E-42 76557 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 102.95 96.588 141120000 0 0 0 5860100 5114700 8834800 14617000 7803000 7744000 18973000 15538000 15324000 9545300 13281000 18481000 197 431 179 1773;1774;1775;1776;1777;1778;1779;1780;1781;1782;1783;1784 1539;1540;1541;1542;1543;1544;1545;1546;1547;1548;1549;1550;1551;1552;1553;1554;1555 1540 17 AADSDDGAVSAPAASDGGVSK Unmodified 1846.8181 0.81807905 3857 Q96GM8 TOE1 Target of EGR1 protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 2 1 1 1 31.641 31.746 2 1.8238E-53 33734 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 154.6 148.36 56822000 0 0 0 5050300 3659100 4188200 5025800 3406500 3719900 5857100 0 0 10494000 5517100 9904600 198 3857 180 1785;1786;1787;1788;1789;1790;1791;1792;1793;1794;1795;1796 1556;1557;1558;1559;1560;1561;1562;1563;1564;1565 1558 10 AADSICDGDLVDSQIR Unmodified 1733.789 0.78902753 1349 P35251 RFC1 Replication factor C subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.727 65.813 2 3.5378E-19 75333 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 105.17 98.511 60730000 0 0 0 3320600 3688400 4324100 6393400 4708000 2889700 3803600 6585900 9326200 5195500 5103900 5390900 199 1349 181 1797;1798;1799;1800;1801;1802;1803;1804;1805;1806;1807;1808 1566;1567;1568;1569;1570;1571;1572;1573;1574;1575;1576;1577 1575 12 AADSLQQNLQR Unmodified 1242.6317 0.63166267 2644 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 33.487 33.701 2 0.0019464 36952 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 81.594 56.035 19059000 0 0 0 0 1794100 1374900 0 1054000 0 3209200 2783900 0 2686100 2808300 3348600 200 2644 182 1809;1810;1811;1812;1813;1814;1815;1816 1578;1579 1578 2 AADSQNSGEGNTGAAESSFSQEVSR Unmodified 2485.0589 0.05893104 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 47.203 47.401 2;3 9.4554E-51 52988 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 107.17 103.88 543960000 0 0 0 19329000 28814000 33330000 36363000 25193000 39664000 64920000 50746000 64687000 48477000 45523000 86915000 201 965 183 1817;1818;1819;1820;1821;1822;1823;1824;1825;1826;1827;1828;1829;1830;1831;1832;1833;1834;1835;1836;1837;1838;1839;1840 1580;1581;1582;1583;1584;1585;1586;1587;1588;1589;1590;1591;1592;1593;1594;1595;1596 1592 17 AADTDGDGQVNYEEFVR Unmodified 1884.8126 0.81259975 1218 P27482 CALML3 Calmodulin-like protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 2 1 1 69.917 69.93 2 7.9371E-14 80654 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 112.86 103.53 44369000 0 0 0 16980000 3055400 0 2888700 8370800 0 0 2141600 0 3326200 0 7606500 202 1218 184 1841;1842;1843;1844;1845;1846;1847;1848 1597;1598;1599;1600;1601;1602 1601 6 AADTIGYPVMIR Oxidation (M) 1321.67 0.67002202 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 1 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 67.292 67.706 2 0.005632 77476 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.794 42.833 28756000 0 0 0 0 0 0 0 0 0 0 8757900 7998300 0 0 12000000 203 1300 185 1849;1850;1851 1603;1604 1604 1915 2 AADTIGYPVMIR Unmodified 1305.6751 0.67510739 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 75.371 75.582 2 0.0044857 86711 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.516 55.088 43182000 0 0 0 0 0 0 1902400 5134900 3395600 0 7379200 5956300 0 0 19413000 204 1300 185 1852;1853;1854;1855;1856;1857 1605;1606 1605 2 AADTQVSETLK Acetyl (Protein N-term) 1203.5983 0.59829686 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.4 3.98 2 1 7 3 1 1 1 1 1 1 1 63.474 64.74 2;3 4.602E-05 57490 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 109.29 90.019 205970000 19856000 0 0 23947000 30778000 39716000 0 0 0 41715000 0 0 32427000 17528000 0 205 3641 186 1858;1859;1860;1861;1862;1863;1864;1865;1866;1867 1607;1608;1609;1610;1611;1612;1613;1614;1615;1616 1616 9 AADTQVSETLK Unmodified 1161.5877 0.58773217 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 2 30.134 29.781 2 1.0966E-06 37468 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.75 68.218 136560000 0 15694000 0 0 11359000 0 14391000 13978000 0 19669000 23709000 27548000 0 0 10216000 206 3641 186 1868;1869;1870;1871;1872;1873;1874;1875;1876 1617;1618;1619;1620 1618 2 AADTQVSETLKR Acetyl (Protein N-term) 1359.6994 0.69940789 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 44.216 44.829 2 3.0486E-08 49839 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 125.74 89.914 26711000 0 0 0 0 0 0 0 0 0 0 0 14026000 7537100 0 5148300 207 3641 187 1877;1878;1879;1880;1881 1621;1622;1623;1624;1625 1625 5 AADVEQLKPEEIK Unmodified 1468.7773 0.77732386 4641 Q9NU22 MDN1 Midasin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 4 1 1 1 1 1 1 1 1 1 1 1 1 49.439 48.224 2;3 1.9094E-09 62791 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.3 112.84 447390000 0 137530000 0 15208000 16863000 22214000 19298000 21887000 14975000 26337000 37825000 41199000 39139000 28808000 26107000 208 4641 188 1882;1883;1884;1885;1886;1887;1888;1889;1890;1891;1892;1893;1894;1895;1896;1897 1626;1627;1628;1629;1630;1631;1632;1633;1634;1635;1636;1637;1638;1639;1640 1629 13 AADVSVTHRPPLSPK Acetyl (Protein N-term) 1615.8682 0.86820455 3276 Q8IY67 RAVER1 Ribonucleoprotein PTB-binding 1 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 57.814 52.114 3 0.00011884 65091 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 80.534 68.151 68731000 31719000 26757000 10256000 0 0 0 0 0 0 0 0 0 0 0 0 209 3276 189 1898;1899;1900;1901 1641;1642;1643;1644;1645;1646 1646 6 AAEAAAAPAESAAPAAGEEPSK Unmodified 1965.928 0.92796385 1993 P80723 BASP1 Brain acid soluble protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.81 1 2 1 24 2 2 2 2 2 2 2 2 2 2 2 2 2 2 38.983 38.747 2;3 9.7786E-54 40102 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 128.9 128.9 1687500000 335450000 22477000 0 57847000 61518000 128240000 60236000 67969000 84077000 99141000 150610000 167720000 98108000 141340000 212780000 210 1993 190 1902;1903;1904;1905;1906;1907;1908;1909;1910;1911;1912;1913;1914;1915;1916;1917;1918;1919;1920;1921;1922;1923;1924;1925;1926;1927;1928;1929 1647;1648;1649;1650;1651;1652;1653;1654;1655;1656;1657;1658;1659;1660;1661;1662;1663;1664;1665;1666;1667 1660 20 AAEAAAAPAESAAPAAGEEPSKEEGEPK Unmodified 2635.2249 0.22493374 1993 P80723 BASP1 Brain acid soluble protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.67 3.65 1 5 1 17 2 4 1 1 2 1 1 1 1 2 2 1 1 2 2 41.373 40.224 3;4 1.9823E-85 41179 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 121.91 118.97 2672000000 147110000 528000000 8317500 90572000 131860000 73962000 110510000 130630000 58300000 166410000 256020000 374490000 146620000 135950000 313250000 211 1993 191 1930;1931;1932;1933;1934;1935;1936;1937;1938;1939;1940;1941;1942;1943;1944;1945;1946;1947;1948;1949;1950;1951;1952;1953 1668;1669;1670;1671;1672;1673;1674;1675;1676;1677;1678;1679;1680;1681;1682;1683;1684;1685 1683 18 AAEAAAAPAESAAPAAGEEPSKEEGEPKK Unmodified 2763.3199 0.31989675 1993 P80723 BASP1 Brain acid soluble protein 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 33.134 32.35 4 3.8076E-22 43183 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.748 68.585 42268000 8551700 0 0 0 4052700 0 0 0 0 0 7717900 9509000 0 5421800 7015000 212 1993 192 1954;1955;1956;1957;1958;1959 1686;1687;1688;1689;1690;1691 1688 6 AAEAAASAYYNPGNPHNVYMPTSQPPPPPYYPPEDK Oxidation (M) 3916.7679 0.76790474 3726 Q969T9 WBP2 WW domain-binding protein 2 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 78.181 74.104 3 4.0585E-30 92314 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.44 66.725 27908000 0 27908000 0 0 0 0 0 0 0 0 0 0 0 0 0 213 3726 193 1960;1961 1692 1692 5298 1 AAEAAASAYYNPGNPHNVYMPTSQPPPPPYYPPEDK Unmodified 3900.773 0.77299012 3726 Q969T9 WBP2 WW domain-binding protein 2 yes yes 0 0 0 By MS/MS 3 0 1 1 80.859 77.559 3 4.1918E-05 92971 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 36.972 35.389 8532100 0 8532100 0 0 0 0 0 0 0 0 0 0 0 0 0 214 3726 193 1962 1693 1693 1 AAEAADLGLGAAVPVELR Acetyl (Protein N-term) 1763.9418 0.94176342 5244 Q9Y5Q8 GTF3C5 General transcription factor 3C polypeptide 5 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 95.024 95.141 2 5.7821E-30 110596 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 141.38 132.87 2869300 0 0 0 0 0 0 0 0 0 2031400 0 0 0 837940 0 215 5244 194 1963;1964;1965 1694;1695;1696 1694 3 AAEAADLGLGAAVPVELRR Acetyl (Protein N-term) 1920.0429 0.042874453 5244 Q9Y5Q8 GTF3C5 General transcription factor 3C polypeptide 5 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 88.912 89.054 2 4.3933E-17 103322 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 93.959 84.771 27238000 0 0 0 0 0 1242900 0 1495900 1840800 6679700 3456900 2396000 0 2628700 7497000 216 5244 195 1966;1967;1968;1969;1970;1971;1972;1973 1697;1698;1699 1697 3 AAEAAPPTQEAQGETEPTEQAPDALEQAADTSR Unmodified 3379.5288 0.52877991 3308 Q8N163 CCAR2 Cell cycle and apoptosis regulator protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.221 68.298 3 8.2624E-96 78566 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 111.79 100.99 164740000 0 0 0 11015000 10446000 14600000 11907000 9173300 8555100 12111000 17701000 19644000 10893000 17664000 21034000 217 3308 196 1974;1975;1976;1977;1978;1979;1980;1981;1982;1983;1984;1985 1700;1701;1702;1703;1704;1705;1706;1707;1708;1709;1710;1711;1712;1713 1713 14 AAEAAPPTQEAQGETEPTEQAPDALEQAADTSRR Unmodified 3535.6299 0.62989094 3308 Q8N163 CCAR2 Cell cycle and apoptosis regulator protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 64.59 64.677 3;4 2.117E-58 73956 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 89.149 87.095 537980000 0 0 0 26023000 37320000 44080000 33868000 33401000 37378000 45529000 53320000 64433000 42061000 47401000 73164000 218 3308 197 1986;1987;1988;1989;1990;1991;1992;1993;1994;1995;1996;1997;1998;1999;2000;2001;2002;2003;2004;2005;2006;2007;2008;2009 1714;1715;1716;1717;1718;1719;1720;1721;1722;1723;1724;1725;1726;1727;1728;1729;1730;1731;1732;1733;1734 1716 17 AAEALHGEADSSGVLAAVDATVNK Unmodified 2295.1343 0.13426824 2412 Q14554 PDIA5 Protein disulfide-isomerase A5 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 81.801 78.285 3 8.627E-47 93453 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 92.95 84.864 52217000 0 49737000 2479400 0 0 0 0 0 0 0 0 0 0 0 0 219 2412 198 2010;2011;2012 1735;1736 1736 2 AAEALVREAEAK Unmodified 1256.6725 0.67246486 1187 P25391 LAMA1 Laminin subunit alpha-1 yes yes 0 0 1 By MS/MS By MS/MS 2.2 0.4 4 1 3 2 40.999 36.601 2;3 0.003548 45833 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 81.239 41.302 74049000 0 36321000 37728000 0 0 0 0 0 0 0 0 0 0 0 0 220 1187 199 2013;2014;2015;2016;2017 1737;1738;1739;1740 1740 1 AAEATAVAGSGAVGGCLAK Acetyl (Protein N-term) 1701.8356 0.83558379 5083 Q9Y259 CHKB Choline/ethanolamine kinase yes yes 1 0 0 By MS/MS 1 0 1 1 102.73 108 2 3.472E-06 87934 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 109.84 97.979 2505500 2505500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 221 5083 200 2018 1741 1741 1 AAECNIVVTQPR Unmodified 1356.682 0.68198369 2152 Q08211 DHX9 ATP-dependent RNA helicase A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.932 42.109 2 3.1102E-08 46887 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 129.7 116.32 269910000 0 0 0 20823000 18890000 21406000 16177000 15469000 14480000 27686000 22085000 29310000 30359000 22059000 31165000 222 2152 201 2019;2020;2021;2022;2023;2024;2025;2026;2027;2028;2029;2030 1742;1743;1744;1745;1746;1747;1748;1749;1750;1751;1752;1753;1754 1752 13 AAEDDEDDDVDTK Unmodified 1436.5427 0.54269205 821 P06454 PTMA Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 11.751 11.899 2 1.1252E-12 10570 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 151.15 147.89 108910000 0 0 0 4425700 5556800 2750500 8977100 9690500 4730100 5768300 15114000 14436000 10582000 8319000 18556000 223 821 202 2031;2032;2033;2034;2035;2036;2037;2038;2039;2040;2041;2042 1755;1756;1757;1758;1759;1760;1761;1762;1763;1764;1765;1766 1764 12 AAEDDEDDDVDTKK Unmodified 1564.6377 0.63765507 821 P06454 PTMA Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 8.257 8.3985 3 0.0042012 5888 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 38.161 32.339 39231000 0 0 0 2738500 1766400 0 1888500 1955200 0 1114300 11606000 5184200 3383000 2511400 7082500 224 821 203 2043;2044;2045;2046;2047;2048;2049;2050;2051;2052 1767 1767 1 AAEDELQLPR Acetyl (Protein N-term) 1182.5881 0.58806652 1971 P78318 IGBP1 Immunoglobulin-binding protein 1 yes yes 1 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 73.949 74.033 2 0.00063204 85331 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 99.139 89.358 107670000 0 0 0 7700700 0 14990000 10904000 6836800 3978300 12378000 16135000 0 0 12935000 21814000 225 1971 204 2053;2054;2055;2056;2057;2058;2059;2060;2061 1768;1769;1770;1771 1768 4 AAEDLFVNIR Unmodified 1146.6033 0.60332266 5094 Q9Y2A7 NCKAP1 Nck-associated protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 75.91 75.953 2 0.0070418 87175 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.713 30.616 55993000 0 0 0 7067200 0 0 0 8325600 0 0 0 0 9832300 8973300 21795000 226 5094 205 2062;2063;2064;2065;2066 1772;1773 1772 2 AAEDLLSQIQENYQK Unmodified 1748.8581 0.85809337 1187 P25391 LAMA1 Laminin subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 81.476 80.703 2 1.0982E-37 99284 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.13 113.92 113790000 0 84591000 0 0 0 0 2447500 2616200 3290200 5761800 0 0 3775200 3213300 8090000 227 1187 206 2067;2068;2069;2070;2071;2072;2073;2074;2075 1774;1775;1776;1777;1778;1779;1780;1781 1776 8 AAEDSPYWVSPAYSK Unmodified 1669.7624 0.76240208 4693 Q9NW82 WDR70 WD repeat-containing protein 70 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 6.25 3.77 1 1 2 2 1 1 69.061 66.66 2 7.0901E-38 83948 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.27 119.89 123780000 0 90319000 0 0 0 0 0 0 0 0 0 0 0 11985000 21478000 228 4693 207 2076;2077;2078;2079 1782;1783;1784 1782 3 AAEEAEEARVQAER Unmodified 1557.7383 0.73831259 2501 Q15149 PLEC Plectin yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 22.794 23.019 3 0.037406 24653 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 37.156 31.279 42348000 0 0 0 3451100 2295300 3547000 0 2790600 3048600 4881700 3329100 5770300 4747800 3896000 4590500 229 2501 208 2080;2081;2082;2083;2084;2085;2086;2087;2088;2089;2090 1785 1785 0 AAEEEEVDSADTGER Acetyl (Protein N-term) 1648.67 0.67001783 3529 Q8WTS1 ABHD5 1-acylglycerol-3-phosphate O-acyltransferase ABHD5 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.098 42.339 2 5.7291E-21 47099 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 116.54 109.65 59528000 0 0 0 0 4710400 3209500 3958900 3689400 4391600 4388900 7755400 6771200 8431000 5035100 7186100 230 3529 209 2091;2092;2093;2094;2095;2096;2097;2098;2099;2100;2101;2102 1786;1787;1788;1789;1790;1791;1792;1793;1794;1795;1796;1797 1791 11 AAEEIGIK Unmodified 829.45453 0.45453316 953 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.53 1.88 1 16 1 2 2 2 2 1 1 1 1 1 1 2 28.456 28.307 2 0.009506 29830 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.671 24.504 2170800000 0 1516400000 0 57135000 43651000 87649000 69597000 23200000 13174000 34946000 0 72080000 23050000 33579000 196340000 231 953 210 2103;2104;2105;2106;2107;2108;2109;2110;2111;2112;2113;2114;2115;2116;2117;2118;2119 1798;1799;1800;1801;1802;1803;1804 1801 3 AAEEPQQQK Acetyl (Protein N-term) 1069.504 0.50400254 3840 Q96FW1 OTUB1 Ubiquitin thioesterase OTUB1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 3 9 1 1 1 1 1 1 1 1 1 1 1 1 13.819 14.025 2 0.0011334 12740 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.59 91.962 60796000 2146800 2286900 1538000 0 0 10097000 0 1317200 2301400 5736400 6894600 4746100 2273100 5162800 16296000 232 3840 211 2120;2121;2122;2123;2124;2125;2126;2127;2128;2129;2130;2131 1805;1806;1807;1808;1809;1810;1811;1812 1806 8 AAEEPSKVEEK Unmodified 1215.5983 0.59829686 1256 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.29 3.67 4 2 11 1 4 1 1 1 1 1 1 1 1 1 1 1 1 8.4703 7.4072 2;3 1.7941E-15 8970 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 172.27 123.85 855490000 11513000 352740000 813700 1825300 2094100 1107900 2243700 1494200 0 2302800 468640000 3901600 1698400 2032300 3080700 233 1256 212 2132;2133;2134;2135;2136;2137;2138;2139;2140;2141;2142;2143;2144;2145;2146;2147;2148 1813;1814;1815;1816;1817 1815 5 AAEEQLSAR Unmodified 973.48287 0.48287317 3782 Q96CS2 HAUS1 HAUS augmin-like complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 11 1 1 2 1 1 1 1 1 1 1 15.124 15.28 2 0.0032531 13925 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 90.657 26.449 78136000 0 0 0 5831400 4330600 7455100 0 6228700 4408500 7964400 0 11630000 9064900 7846600 13376000 234 3782 213 2149;2150;2151;2152;2153;2154;2155;2156;2157;2158;2159 1818;1819;1820;1821;1822;1823;1824 1823 5 AAEEVLQTVDHYK Acetyl (Protein N-term) 1543.7518 0.75183739 3843 Q96G01 BICD1 Protein bicaudal D homolog 1 yes yes 1 0 0 By MS/MS 2 0 1 1 92.611 87.701 2 1.1972E-13 108853 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.65 98.646 52899000 0 52899000 0 0 0 0 0 0 0 0 0 0 0 0 0 235 3843 214 2160 1825 1825 1 AAEEVRHLK Unmodified 1051.5774 0.57744226 835 P07108 DBI Acyl-CoA-binding protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0.632 1 3 1 2 2 1 31.288 29.757 2 1.7715E-05 11936 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 168.27 126.84 1918200000 1665400000 84355000 168490000 0 0 0 0 0 0 0 0 0 0 0 0 236 835 215 2161;2162;2163;2164;2165 1826;1827;1828;1829;1830;1831 1826 4 AAEFGEPTSEQTGTAAGK Unmodified 1750.801 0.80097243 659 O95425 SVIL Supervillin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 35.862 36.047 2 2.6897E-05 39809 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 92.856 89.212 54863000 0 0 0 3293200 4425700 5749800 4497600 0 3183400 6226900 5668300 6355000 5732300 4418200 5312600 237 659 216 2166;2167;2168;2169;2170;2171;2172;2173;2174;2175;2176 1832;1833;1834;1835;1836;1837;1838;1839;1840;1841 1832 10 AAEFNSNLNR Unmodified 1134.5418 0.54178503 3540 Q8WUB8 PHF10 PHD finger protein 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 31.095 31.291 2 0.00029134 33578 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 139.88 117.75 104650000 0 0 0 7810700 5266300 11261000 7237500 0 0 11587000 14723000 14129000 10273000 9351100 13010000 238 3540 217 2177;2178;2179;2180;2181;2182;2183;2184;2185;2186 1842;1843;1844;1845;1846;1847;1848;1849;1850;1851 1849 10 AAEFNSNLNRER Unmodified 1419.6855 0.68548916 3540 Q8WUB8 PHF10 PHD finger protein 10 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 27.197 27.412 3 0.010673 29404 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 42.809 27.053 71347000 0 0 0 4136700 4313300 0 5849100 6408200 6629000 6601000 8057100 7813500 5207400 5543000 10789000 239 3540 218 2187;2188;2189;2190;2191;2192;2193;2194;2195;2196;2197 1852;1853 1852 2 AAEGGLSSPEFSELCIWLGSQIK Unmodified 2478.2101 0.21007572 2693 Q52LJ0 FAM98B Protein FAM98B yes yes 0 0 0 By MS/MS 2 0 1 1 100.46 95.75 3 0.0020193 118369 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 20.03 12.578 12499000 0 12499000 0 0 0 0 0 0 0 0 0 0 0 0 0 240 2693 219 2198 1854 1854 1 AAEGWSAPILTLAR Unmodified 1454.7882 0.78816332 3998 Q96T51 RUFY1 RUN and FYVE domain-containing protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 87.727 87.861 2 0.0016508 101187 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 56.359 38.992 24701000 0 0 0 0 0 1979700 1957000 1827400 0 2290900 2439400 2912800 1416700 2444900 7431800 241 3998 220 2199;2200;2201;2202;2203;2204;2205;2206;2207 1855;1856;1857;1858;1859;1860;1861;1862;1863 1860 9 AAEHAWQK Unmodified 939.45626 0.45626449 1420 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 yes yes 0 0 0 By matching By MS/MS By MS/MS 2 0 3 1 1 1 11.145 7.9906 2 0.027595 11186 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.324 45.395 73956000 50013000 10882000 13062000 0 0 0 0 0 0 0 0 0 0 0 0 242 1420 221 2208;2209;2210 1864 1864 1 AAEHEVPLQER Unmodified 1277.6364 0.6364137 4807 Q9P260 KIAA1468 LisH domain and HEAT repeat-containing protein KIAA1468 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 25.158 25.371 3 0.046789 27278 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 24.071 14.384 36360000 0 0 0 2970300 3287600 3768100 3482800 2549500 0 0 2655600 2580600 4036600 5266100 5762700 243 4807 222 2211;2212;2213;2214;2215;2216;2217;2218;2219;2220 1865 1865 1 AAEHEVPLQERK Unmodified 1405.7314 0.73137672 4807 Q9P260 KIAA1468 LisH domain and HEAT repeat-containing protein KIAA1468 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18.356 17.647 3 0.0022179 23565 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 74.392 57.45 80671000 11169000 6550200 35971000 1300400 908990 1940300 2429900 1871400 1535700 2068500 2693300 4748600 2972000 0 4511900 244 4807 223 2221;2222;2223;2224;2225;2226;2227;2228;2229;2230;2231;2232;2233;2234 1866;1867;1868;1869;1870;1871;1872 1871 6 AAEHNGNSERIEEIK Unmodified 1695.8176 0.81762554 2833 Q5VZK9 LRRC16A Leucine-rich repeat-containing protein 16A yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 19.889 19.644 3;4 6.5081E-16 25673 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 91.076 49.046 106100000 0 0 44543000 2952000 4015400 7510100 3755000 3096200 3100400 5896700 5575200 8356800 4387700 4756200 8152700 245 2833 224 2235;2236;2237;2238;2239;2240;2241;2242;2243;2244;2245;2246;2247;2248 1873;1874;1875;1876;1877 1876 5 AAEIASSDSANVSSR Unmodified 1463.6852 0.68521439 1453 P42338 PIK3CB Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform yes yes 0 0 0 By MS/MS 10 0 1 1 24.687 25.368 2 5.9273E-05 26469 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 91.855 74.419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 246 1453 225 2249 1878 1878 1 AAEISAMLK Unmodified 932.5001 0.50010314 4026 Q99575 POP1 Ribonucleases P/MRP protein subunit POP1 yes yes 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 55.372 55.284 2 0.020914 63435 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 52.716 26.822 10855000 0 0 0 0 2942600 0 4074800 3837900 0 0 0 0 0 0 0 247 4026 226 2250;2251;2252 1879 1879 1 AAELAVQNEVGLVDNPLK Unmodified 1879.0051 0.005091963 4671 Q9NVM6 DNAJC17 DnaJ homolog subfamily C member 17 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 85.364 81.869 2 7.0256E-73 101594 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 200.13 194.47 349810000 0 346120000 3689000 0 0 0 0 0 0 0 0 0 0 0 0 248 4671 227 2253;2254;2255 1880;1881;1882 1880 3 AAELEMELNEHSLVIDTLK Oxidation (M) 2170.0827 0.082749937 4910 Q9UHV9 PFDN2 Prefoldin subunit 2 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 87.748 81.888 3 4.4721E-41 84538 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 130.56 121.46 43958000 43958000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 249 4910 228 2256;2257 1883;1884;1885 1883 6263 3 AAELEMELNEHSLVIDTLK Unmodified 2154.0878 0.087835314 4910 Q9UHV9 PFDN2 Prefoldin subunit 2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 90.915 85.074 3 1.3562E-65 108778 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 145.82 125.26 215700000 215700000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 250 4910 228 2258;2259 1886;1887;1888;1889 1888 4 AAELETDIR Unmodified 1016.5138 0.51383895 601 O94906 PRPF6 Pre-mRNA-processing factor 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 37.517 37.839 2 0.0094767 41817 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 66.621 21.286 100320000 0 0 0 0 0 0 0 23027000 0 0 40304000 0 36991000 0 0 251 601 229 2260;2261;2262 1890;1891;1892 1892 3 AAELFVETIAK Unmodified 1190.6547 0.65468953 4590 Q9NR33 POLE4 DNA polymerase epsilon subunit 4 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 77.027 77.21 2 0.0105 88619 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.472 34.937 27566000 0 0 0 0 0 0 0 2388000 0 5428900 4176100 4079400 0 4085500 7408000 252 4590 230 2263;2264;2265;2266;2267;2268 1893;1894;1895;1896 1893 4 AAELLQDEYSGR Unmodified 1350.6416 0.64155866 4163 Q9BUK6 MSTO1 Protein misato homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 49.962 50.064 2 0.00015234 56330 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 85.958 73.168 385680000 0 0 0 32774000 25792000 33789000 25402000 39054000 70666000 34031000 32063000 0 35087000 29297000 27721000 253 4163 231 2269;2270;2271;2272;2273;2274;2275;2276;2277;2278;2279 1897;1898;1899;1900;1901;1902;1903;1904;1905 1899 7 AAELSSGRHANTDYAPK Unmodified 1786.8598 0.85982471 4237 Q9BY12 SCAPER S phase cyclin A-associated protein in the endoplasmic reticulum yes yes 0 0 1 By MS/MS 2 0 1 1 28.599 23.081 3 0.0014065 32616 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.888 33.292 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 254 4237 232 2280 1906 1906 1 AAELTATQVEEEEEEEDFRK Unmodified 2352.0605 0.06049417 535 O75717 WDHD1 WD repeat and HMG-box DNA-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 63.495 62.152 3 1.5147E-37 71816 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 108.49 105.3 278330000 93984000 51732000 9591700 6276500 10394000 14351000 6317800 8654700 7344100 9467900 8607900 18714000 8722300 8171700 16003000 255 535 233 2281;2282;2283;2284;2285;2286;2287;2288;2289;2290;2291;2292;2293;2294;2295;2296 1907;1908;1909;1910;1911;1912;1913;1914;1915;1916;1917;1918;1919;1920;1921;1922;1923;1924;1925;1926;1927;1928 1924 22 AAELVEAK Acetyl (Protein N-term) 871.4651 0.46509784 3316 Q8N2W9 PIAS4 E3 SUMO-protein ligase PIAS4 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 20 1 2 2 2 2 1 2 2 2 2 2 56.73 56.888 1;2 0.0028185 64435 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 85.212 55.027 237650000 0 0 0 15300000 18975000 24185000 23034000 0 13602000 17281000 29090000 28160000 22902000 17735000 27382000 256 3316 234 2297;2298;2299;2300;2301;2302;2303;2304;2305;2306;2307;2308;2309;2310;2311;2312;2313;2314;2315;2316 1929;1930;1931;1932;1933;1934;1935;1936;1937 1934 8 AAEMLSQLDLFSRNEDLEEIASTDLK Oxidation (M) 2953.4226 0.42264727 1971 P78318 IGBP1 Immunoglobulin-binding protein 1 yes yes 0 1 1 By MS/MS 2 0 1 1 96.267 88.136 3 7.0846E-38 113879 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 109.06 102.18 16758000 16758000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 257 1971 235 2317 1938 1938 3162 1 AAEMLSQLDLFSRNEDLEEIASTDLK Unmodified 2937.4277 0.42773264 1971 P78318 IGBP1 Immunoglobulin-binding protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 97.909 89.779 3 3.2553E-151 115890 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 187.29 170.07 58026000 58026000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 258 1971 235 2318 1939 1939 1 AAEPQEQEFGK Unmodified 1232.5673 0.56733108 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 26.112 26.175 2 0.0022576 26765 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 82.645 73.431 219490000 0 0 0 27902000 23189000 23548000 22988000 22127000 21328000 27585000 0 0 27884000 22938000 0 259 4285 236 2319;2320;2321;2322;2323;2324;2325;2326;2327 1940;1941;1942;1943;1944 1943 3 AAEPVEDNCINFVAMK Acetyl (Protein N-term);Oxidation (M) 1864.8335 0.83353488 2367 Q14116 IL18 Interleukin-18 yes yes 1 1 0 By MS/MS By MS/MS 5.5 4.5 1 1 1 1 90.861 93.616 2;3 6.0168E-07 90772 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.979 75.486 33689000 19326000 0 0 0 0 0 0 0 0 0 0 0 0 0 14362000 260 2367 237 2328;2329 1945;1946 1945 3852 2 AAEPVEDNCINFVAMK Acetyl (Protein N-term) 1848.8386 0.83862026 2367 Q14116 IL18 Interleukin-18 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.29 4.3 2 1 4 2 1 1 1 1 1 90.789 90.596 2 2.7081E-17 89999 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 143.17 137.71 102220000 35361000 31655000 0 0 0 0 0 0 0 0 6234800 4431200 0 5118000 19424000 261 2367 237 2330;2331;2332;2333;2334;2335;2336 1947;1948;1949;1950;1951;1952;1953 1948 7 AAEPVTFHVPWK Unmodified 1380.719 0.71902112 3264 Q8IXQ3 C9orf40 Uncharacterized protein C9orf40 yes yes 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 76.509 76.603 3 0.015401 87956 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.58 31.21 32907000 0 0 0 1146600 0 0 1163400 0 2597200 2718200 2758600 4214200 2342100 4016500 11951000 262 3264 238 2337;2338;2339;2340;2341;2342;2343;2344;2345 1954 1954 1 AAEQDPEAR Acetyl (Protein N-term) 1027.4571 0.45705235 2991 Q6XQN6 NAPRT Nicotinate phosphoribosyltransferase yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 17.857 18.118 2 0.01593 18406 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 42.287 32.213 63759000 0 0 0 4928900 0 0 3484400 2920900 0 4065500 9263600 10587000 3675300 7293400 17540000 263 2991 239 2346;2347;2348;2349;2350;2351;2352;2353;2354 1955 1955 1 AAEQDPEARAAAR Unmodified 1354.6589 0.65894006 2991 Q6XQN6 NAPRT Nicotinate phosphoribosyltransferase yes yes 0 0 1 By MS/MS 10 0 1 1 36.498 36.655 3 0.04269 40523 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 23.809 17.662 1235700 0 0 0 0 0 0 0 0 0 1235700 0 0 0 0 0 264 2991 240 2355 1956 1956 0 AAEQTAAREQAK Unmodified 1272.6422 0.64222736 2062 Q01780 EXOSC10 Exosome component 10 yes yes 0 0 1 By MS/MS 2.5 0.5 2 2 4 6.4609 3.1601 2;3 1.0828E-13 5213 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 143.5 85.069 69920000 0 69920000 0 0 0 0 0 0 0 0 0 0 0 0 0 265 2062 241 2356;2357;2358;2359 1957;1958 1957 2 AAEQYTPK Unmodified 906.4447 0.44469675 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 12.661 12.888 2 0.0081134 11402 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 87.323 71.691 132170000 0 0 0 0 0 22280000 11313000 0 6681100 13948000 13201000 16911000 0 16707000 31127000 266 1565 242 2360;2361;2362;2363;2364;2365;2366;2367 1959;1960;1961 1960 2 AAESLADPTEYENLFPGLK Unmodified 2064.0052 0.0051515425 1358 P35606 COPB2 Coatomer subunit beta' yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.4 3.68 4 1 10 3 2 1 1 1 1 1 1 1 1 1 1 92.408 91.287 2;3 2.919E-90 112397 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 182.07 152.53 1778300000 0 1708800000 8280400 0 1290600 0 853610 3663700 1853100 13381000 9113000 5255000 861730 4038700 20891000 267 1358 243 2368;2369;2370;2371;2372;2373;2374;2375;2376;2377;2378;2379;2380;2381;2382 1962;1963;1964;1965;1966;1967;1968;1969;1970;1971;1972;1973;1974;1975 1965 14 AAESLTAIPEPASPQLLETPIHASQIQK Unmodified 2939.5604 0.5604018 2427 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 84.984 85.115 3 1.808E-85 98384 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.767 89.226 76785000 0 0 0 0 0 5892500 0 0 0 15682000 14260000 12168000 0 0 28782000 268 2427 244 2383;2384;2385;2386;2387 1976;1977;1978;1979;1980;1981 1977 6 AAESTEEVSSLRPPR Unmodified 1627.8166 0.81656291 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.28 43.455 3 6.1608E-19 48512 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 83.692 72.962 375300000 0 0 0 18124000 23590000 28166000 26066000 26097000 33480000 28242000 30763000 66013000 27299000 25621000 41834000 269 3023 245 2388;2389;2390;2391;2392;2393;2394;2395;2396;2397;2398;2399 1982;1983;1984;1985;1986;1987;1988;1989;1990;1991;1992;1993;1994;1995;1996;1997;1998;1999;2000;2001 1990 20 AAESVSKPDVSEEAPGPSK Unmodified 1883.9113 0.91125116 4240 Q9BY42 RTFDC1 Protein RTF2 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 1 4 1 1 1 1 1 1 1 1 1 1 1 1 34.893 33.517 2;3 7.1571E-65 36750 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 141.07 136.27 496110000 10029000 329190000 0 8294200 8620000 8100800 6903000 7959100 7809000 14376000 24231000 27011000 10553000 10507000 22527000 270 4240 246 2400;2401;2402;2403;2404;2405;2406;2407;2408;2409;2410;2411;2412;2413;2414;2415;2416 2002;2003;2004;2005;2006;2007;2008;2009;2010;2011;2012;2013;2014;2015;2016;2017;2018;2019;2020;2021;2022 2018 20 AAETIIDTK Unmodified 960.51278 0.51277632 4303 Q9GZS1 POLR1E DNA-directed RNA polymerase I subunit RPA49 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 2 1 1 1 1 31.824 31.927 2 0.0047973 35111 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 85.67 54.366 78788000 0 0 0 9050000 8083500 8786100 7855500 6298600 0 9283600 0 14481000 8809400 6140300 0 271 4303 247 2417;2418;2419;2420;2421;2422;2423;2424;2425;2426;2427 2023;2024;2025;2026;2027;2028;2029;2030;2031;2032;2033 2023 11 AAETLNFGPEWLR Acetyl (Protein N-term) 1544.7623 0.7623425 497 O75420 GIGYF1 PERQ amino acid-rich with GYF domain-containing protein 1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 96.116 96.252 2 2.052E-08 111677 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.48 85.786 4528000 0 0 0 0 0 0 0 0 0 2201100 0 0 0 0 2327000 272 497 248 2428;2429;2430 2034;2035;2036 2035 3 AAETQTLNFGPEWLR Acetyl (Protein N-term) 1773.8686 0.86859848 2994 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 94.45 94.556 2 2.0338E-36 109965 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 188.06 168.82 34843000 0 0 0 0 2482900 0 1769200 0 1846600 7611800 4838100 4452300 0 3370700 8471300 273 2994 249 2431;2432;2433;2434;2435;2436;2437;2438;2439 2037;2038;2039;2040;2041;2042;2043;2044;2045;2046 2043 10 AAETRNVAGAEAPPPQK Acetyl (Protein N-term) 1747.8853 0.88531118 4849 Q9UBP6 METTL1 tRNA (guanine-N(7)-)-methyltransferase yes yes 1 0 1 By MS/MS By MS/MS 1.33 0.471 2 1 1 2 107.65 110.73 2;3 5.032E-08 46750 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.176 47.499 33390000 20716000 12675000 0 0 0 0 0 0 0 0 0 0 0 0 0 274 4849 250 2440;2441;2442 2047;2048;2049 2047 3 AAEVLPSAR Acetyl (Protein N-term) 954.51345 0.51344502 4303 Q9GZS1 POLR1E DNA-directed RNA polymerase I subunit RPA49 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 59.114 59.302 2 0.017075 68411 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 41.448 28.451 60303000 0 0 0 7355400 0 0 0 0 5044900 9287900 8393000 13187000 0 6356700 10677000 275 4303 251 2443;2444;2445;2446;2447;2448;2449 2050;2051 2051 2 AAEVPNEELINLLLK Unmodified 1664.9349 0.93488713 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 2 1 1 2 96.817 96.539 2;3 0.0013088 112265 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.401 49.16 45262000 0 15400000 0 0 1227400 0 609300 1447700 1380700 7271600 6414800 2197200 0 1164200 8149000 276 3023 252 2450;2451;2452;2453;2454;2455;2456;2457;2458;2459;2460;2461 2052;2053;2054;2055;2056;2057;2058;2059;2060;2061 2055 10 AAEVYFGDLELFEPFDHPEESIPK Acetyl (Protein N-term) 2820.317 0.31704321 2912 Q6NZY4 ZCCHC8 Zinc finger CCHC domain-containing protein 8 yes yes 1 0 0 By MS/MS 2 0 1 1 101.78 93.651 3 0.00050317 120546 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 41.208 34.559 12606000 12606000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 277 2912 253 2462 2062 2062 1 AAEVYTR Unmodified 808.40792 0.40791731 3102 Q7Z4V5 HDGFRP2 Hepatoma-derived growth factor-related protein 2 yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS 10 0 5 1 1 1 1 1 12.765 12.79 2 0.026251 10968 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 79.116 26.433 24990000 0 0 0 6141500 3939200 0 4800000 0 0 0 0 0 6473800 3635600 0 278 3102 254 2463;2464;2465;2466;2467 2063 2063 1 AAEVYTRLK Unmodified 1049.5869 0.58694431 3102 Q7Z4V5 HDGFRP2 Hepatoma-derived growth factor-related protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 34.004 29.25 2 0.010568 40836 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 106.42 47.073 226750000 197650000 12528000 16575000 0 0 0 0 0 0 0 0 0 0 0 0 279 3102 255 2468;2469;2470 2064 2064 0 AAFAPFGR Unmodified 835.43407 0.43407249 1302 P31483 TIA1 Nucleolysin TIA-1 isoform p40 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.681 56.805 2 0.012633 64679 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 74.191 46.017 153940000 0 0 0 8263600 5830000 12033000 11495000 9291800 10111000 15951000 17675000 13618000 11159000 11428000 27083000 280 1302 256 2471;2472;2473;2474;2475;2476;2477;2478;2479;2480;2481;2482 2065;2066;2067;2068;2069;2070 2065 6 AAFDDAIAELDTLSEESYK Unmodified 2086.9583 0.95826093 1882 P62258 YWHAE 14-3-3 protein epsilon yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3.66 3.08 1 19 6 6 6 15 5 2 2 2 95.455 92.17 2;3 6.3537E-151 115019 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 238.81 226.61 22401000000 4317300000 17449000000 604050000 0 0 0 0 0 0 5054900 4922500 0 0 0 21025000 281 1882 257 2483;2484;2485;2486;2487;2488;2489;2490;2491;2492;2493;2494;2495;2496;2497;2498;2499;2500;2501;2502;2503;2504;2505;2506;2507;2508;2509;2510;2511;2512;2513;2514 2071;2072;2073;2074;2075;2076;2077;2078;2079;2080;2081;2082;2083;2084;2085;2086;2087;2088;2089;2090;2091;2092;2093;2094;2095;2096;2097;2098;2099 2080 20 AAFDVNNK Unmodified 877.42938 0.42938104 942 P11274 BCR Breakpoint cluster region protein yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 25.575 20.862 2 0.030163 28084 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.134 42.619 31790000 13701000 18090000 0 0 0 0 0 0 0 0 0 0 0 0 0 282 942 258 2515;2516 2100;2101 2101 2 AAFEALQVK Unmodified 975.53893 0.53893149 2979 Q6UWE0 LRSAM1 E3 ubiquitin-protein ligase LRSAM1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 63.633 57.642 2 0.020472 74151 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.213 48.075 103000000 9376700 90372000 3251800 0 0 0 0 0 0 0 0 0 0 0 0 283 2979 259 2517;2518;2519 2102 2102 1 AAFEELEK Unmodified 935.46001 0.46001246 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.727 41.903 2 0.0075386 46451 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 89.296 60.147 140480000 0 0 0 10079000 7595700 12558000 7609500 9218500 8344200 13597000 15507000 15748000 11953000 9545200 18725000 284 2291 260 2520;2521;2522;2523;2524;2525;2526;2527;2528;2529;2530;2531 2103;2104;2105;2106;2107;2108;2109 2107 7 AAFERESDVPLK Unmodified 1360.6987 0.69867961 3717 Q969H8 MYDGF Myeloid-derived growth factor yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 6.67 3.86 7 2 12 2 4 3 1 1 1 1 1 1 1 1 1 1 1 1 45.127 42.915 2;3 0.0011895 56715 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.893 46.153 3139200000 328760000 916820000 1587200000 5175100 5528300 4943300 6420300 10966000 5832300 7669000 50177000 36315000 12012000 38841000 122520000 285 3717 261 2532;2533;2534;2535;2536;2537;2538;2539;2540;2541;2542;2543;2544;2545;2546;2547;2548;2549;2550;2551;2552 2110;2111;2112;2113;2114;2115;2116;2117;2118;2119;2120;2121 2111 7 AAFGEEVDAVDTGISR Unmodified 1635.774 0.77402939 138 O00273 DFFA DNA fragmentation factor subunit alpha yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 70.329 70.463 2 8.646E-05 80284 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.914 81.961 66926000 0 0 0 1182200 0 0 2815600 3261400 0 4005100 10173000 10204000 3980600 9390400 21914000 286 138 262 2553;2554;2555;2556;2557;2558;2559;2560;2561 2122;2123;2124;2125;2126;2127;2128 2124 7 AAFGGSGGR Unmodified 778.3722 0.37220051 79 CON__P35908v2;P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 8.8186 8.8541 2 0.0044372 7011 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 86.833 73.625 + 595190000 0 0 0 145380000 75872000 99646000 55623000 160740000 0 0 57929000 0 0 0 0 287 79 263 2562;2563;2564;2565;2566;2567 2129;2130;2131;2132;2133;2134 2134 5 AAFGGSGGRGSSSGGGYSSGSSSYGSGGR Unmodified 2500.0599 0.059934093 79 CON__P35908v2;P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.945 28.141 3 2.9871E-101 29762 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 128.3 125.45 + 1326000000 0 0 0 95860000 49085000 157960000 50452000 158290000 44618000 91496000 154420000 204120000 192310000 64264000 63094000 288 79 264 2568;2569;2570;2571;2572;2573;2574;2575;2576;2577;2578;2579 2135;2136;2137;2138;2139;2140;2141;2142;2143;2144;2145;2146;2147;2148 2146 14 AAFGGSGGRGSSSGGGYSSGSSSYGSGGRQSGSR Unmodified 3015.3051 0.30514318 79 CON__P35908v2;P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 22.973 23.305 4 5.5178E-44 23892 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 77.31 71.015 + 33736000 0 0 0 0 0 1838400 0 0 0 2478600 5810400 15087000 6090600 2431400 0 289 79 265 2580;2581;2582;2583;2584;2585 2149 2149 1 AAFGILSYEHRPLK Acetyl (Protein N-term) 1642.8831 0.88312633 3709 Q93074 MED12 Mediator of RNA polymerase II transcription subunit 12 yes yes 1 0 1 By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 81.429 81.581 3 0.001657 94011 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.347 40.914 19439000 0 0 0 0 0 0 0 1709000 2439900 3216900 0 1470800 1769200 0 8833400 290 3709 266 2586;2587;2588;2589;2590;2591;2592 2150;2151 2151 2 AAFGISDSYVDGSSFDPQRR Unmodified 2174.0029 0.0028601316 5066 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 76.22 76.365 3 1.9619E-15 87678 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.837 68.036 94835000 0 0 0 0 0 9306900 0 8703700 13468000 8252500 0 12470000 5368300 8696500 28570000 291 5066 267 2593;2594;2595;2596;2597;2598;2599;2600 2152;2153;2154;2155;2156;2157;2158;2159;2160;2161 2155 10 AAFITYLQAK Unmodified 1124.623 0.62299547 3999 Q96T58 SPEN Msx2-interacting protein yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.03 76.091 2 0.0070449 87812 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 63.419 42.794 36979000 0 0 0 2130300 2449900 2447800 2472200 3099100 2271300 3463300 3178500 4052500 2741600 3221800 5450700 292 3999 268 2601;2602;2603;2604;2605;2606;2607;2608;2609;2610;2611;2612 2162;2163;2164;2165;2166;2167 2162 6 AAFLQYCRK Unmodified 1155.5859 0.58589846 3548 Q8WUM0 NUP133 Nuclear pore complex protein Nup133 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 39.012 39.26 3 0.016743 43664 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 36.447 18.388 46008000 0 0 0 2732300 0 4320000 3841400 0 3577400 3300800 4698100 7873700 4925500 4347100 6391500 293 3548 269 2613;2614;2615;2616;2617;2618;2619;2620;2621;2622 2168;2169;2170 2168 3 AAFQPEANPSHLTLNTALVESEDL Unmodified 2566.2551 0.25511165 3581 Q8WX93 PALLD Palladin yes yes 0 0 0 By MS/MS By MS/MS 2 0 4 2 2 92.266 88.574 2;3 6.6314E-07 110272 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.2 96.734 299910000 0 292660000 7250900 0 0 0 0 0 0 0 0 0 0 0 0 294 3581 270 2623;2624;2625;2626 2171;2172 2172 2 AAFQSQYK Unmodified 941.46068 0.46068117 3199 Q86XP3 DDX42 ATP-dependent RNA helicase DDX42 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 25.935 21.414 2 0.0066425 28219 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.54 97.812 120780000 10276000 110500000 0 0 0 0 0 0 0 0 0 0 0 0 0 295 3199 271 2627;2628;2629 2173;2174;2175;2176 2173 4 AAFQYGIK Unmodified 896.4756 0.47560295 2236 Q13123 IK Protein Red yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 47.23 47.303 2 0.013136 52114 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 73.039 56.112 231320000 0 0 0 21508000 24613000 25084000 0 0 25926000 32625000 0 42153000 37671000 21744000 0 296 2236 272 2630;2631;2632;2633;2634;2635;2636;2637 2177;2178;2179;2180 2178 4 AAFTAFEEAQLPR Unmodified 1449.7252 0.72522871 3784 Q96CT7 CCDC124 Coiled-coil domain-containing protein 124 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 79.147 79.326 2 6.3173E-08 91310 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 120.09 86.866 39587000 0 0 0 0 0 0 2413100 0 0 0 7438000 12122000 0 4480300 13133000 297 3784 273 2638;2639;2640;2641;2642 2181;2182;2183;2184 2181 4 AAFTCIK Unmodified 809.41056 0.41055985 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS 3 0 1 1 38.629 33.998 2 0.04973 42307 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 76.847 40.26 4925400 0 4925400 0 0 0 0 0 0 0 0 0 0 0 0 0 298 3119 274 2643 2185 2185 1 AAFTECCQAADK Unmodified 1370.5595 0.55948529 64 CON__P02768-1;P02768 ALB Serum albumin yes no 0 0 0 By MS/MS 10 0 1 1 26.359 26.137 2 0.00029933 27993 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 97.456 90.328 + 21870000 0 0 0 21870000 0 0 0 0 0 0 0 0 0 0 0 299 64 275 2644 2186 2186 1 AAFTTPDHAPLSPQSSVASSGSEQTEEQGSSR Unmodified 3245.4709 0.4708711 2750 Q5PRF9 SAMD4B Protein Smaug homolog 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 59.069 59.155 3 5.6544E-30 66815 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.69 63.105 57478000 0 0 0 5431500 3729100 6081100 4472700 4627000 4314700 0 9247400 11097000 0 0 8478300 300 2750 276 2645;2646;2647;2648;2649;2650;2651;2652;2653;2654 2187;2188;2189;2190;2191;2192;2193;2194;2195 2189 9 AAFVAYALAFPR Unmodified 1295.7026 0.70264277 2991 Q6XQN6 NAPRT Nicotinate phosphoribosyltransferase yes yes 0 0 0 By MS/MS 10 0 1 1 89.392 89.535 2 0.0023325 103594 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.334 70.114 3938800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3938800 301 2991 277 2655 2196;2197 2196 2 AAFVLPEFAR Unmodified 1119.6077 0.60767975 1093 P19623 SRM Spermidine synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 84.4 84.465 2 0.0024724 97826 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 83.265 47.969 170330000 0 0 0 2982300 2750500 10413000 7438100 6282300 6359800 9382700 20956000 16278000 5317200 14473000 67697000 302 1093 278 2656;2657;2658;2659;2660;2661;2662;2663;2664;2665;2666;2667 2198;2199;2200;2201;2202;2203;2204;2205;2206;2207 2203 10 AAGAAEAAVAAVEEVGSAGQFEELLR Acetyl (Protein N-term) 2557.266 0.26601069 570 O76003 GLRX3 Glutaredoxin-3 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 3 1 104.1 99.378 2;3 1.0517E-31 123466 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 105.79 97.402 61194000 6642500 50520000 4031800 0 0 0 0 0 0 0 0 0 0 0 0 303 570 279 2668;2669;2670;2671;2672 2208;2209;2210;2211;2212;2213;2214 2212 7 AAGAAEAAVAAVEEVGSAGQFEELLRLK Acetyl (Protein N-term) 2798.445 0.44503769 570 O76003 GLRX3 Glutaredoxin-3 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS 2.14 0.639 1 4 2 3 3 1 104.43 101.29 2;3 1.2035E-137 119561 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 140.09 126.77 240040000 75059000 163060000 1930900 0 0 0 0 0 0 0 0 0 0 0 0 304 570 280 2673;2674;2675;2676;2677;2678;2679 2215;2216;2217;2218;2219;2220;2221 2218 7 AAGAEPDSILKPELLSAIEK Unmodified 2051.115 0.11503634 4276 Q9BZV1 UBXN6 UBX domain-containing protein 6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 1 1 6 1 1 1 1 1 1 1 1 87.391 86.785 3 0.0011119 104495 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 44.788 41.184 60515000 0 8935400 7676000 0 0 3430300 0 4380600 0 7677800 4983900 0 0 4522800 18908000 305 4276 281 2680;2681;2682;2683;2684;2685;2686;2687 2222;2223;2224;2225;2226;2227 2226 6 AAGALLNGPPQFSTAPEIK Unmodified 1880.9996 0.99961265 470 O75175 CNOT3 CCR4-NOT transcription complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.72 1.37 1 24 1 2 2 2 2 2 2 2 2 2 2 2 2 80.95 80.878 2;3 2.9514E-109 93706 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 188.09 174.19 431520000 0 15355000 0 14256000 26160000 26153000 29582000 31248000 28722000 43986000 41431000 47471000 35888000 32886000 58387000 306 470 282 2688;2689;2690;2691;2692;2693;2694;2695;2696;2697;2698;2699;2700;2701;2702;2703;2704;2705;2706;2707;2708;2709;2710;2711;2712 2228;2229;2230;2231;2232;2233;2234;2235;2236;2237;2238;2239;2240;2241;2242;2243;2244;2245;2246;2247;2248;2249;2250 2247 22 AAGALLTEGEACHMSLSSPELGPLTK Oxidation (M) 2655.2884 0.28840239 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 1 0 By MS/MS 3 0 1 1 81.521 78.222 3 7.6966E-05 93770 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 41.911 39.93 5155300 0 5155300 0 0 0 0 0 0 0 0 0 0 0 0 0 307 2193 283 2713 2251 2251 3556 1 AAGALLTEGEACHMSLSSPELGPLTK Unmodified 2639.2935 0.29348777 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 0 0 By MS/MS 2 0 1 1 85.791 83.358 3 3.1378E-05 100989 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 34.418 27.387 2914300 0 0 2914300 0 0 0 0 0 0 0 0 0 0 0 0 308 2193 283 2714 2252 2252 1 AAGARPLTSPESLSR Unmodified 1511.8056 0.80560429 1502 P46379 BAG6 Large proline-rich protein BAG6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.541 38.721 3 1.1125E-22 42769 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 113.59 100.96 950090000 0 0 0 46712000 47870000 55515000 63141000 81853000 49809000 78811000 96764000 117630000 110410000 81476000 120100000 309 1502 284 2715;2716;2717;2718;2719;2720;2721;2722;2723;2724;2725;2726 2253;2254;2255;2256;2257;2258;2259;2260;2261;2262;2263 2257 3 AAGASDVVLYK Unmodified 1092.5815 0.58152458 4625 Q9NSD9 FARSB Phenylalanine--tRNA ligase beta subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 50.368 44.728 2 2.4085E-06 58216 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.12 86.322 272740000 13264000 255460000 4012000 0 0 0 0 0 0 0 0 0 0 0 0 310 4625 285 2727;2728;2729;2730 2264;2265;2266;2267;2268 2265 4 AAGCNIPVASVAAGFPAGQTHLK Unmodified 2236.1423 0.14227092 5134 Q9Y315 DERA Deoxyribose-phosphate aldolase yes yes 0 0 0 By MS/MS 2 0 1 1 83.525 75.394 3 1.4875E-07 98535 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.137 61.785 11262000 11262000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 311 5134 286 2731 2269 2269 1 AAGELEGGK Acetyl (Protein N-term) 872.42396 0.42396131 3356 Q8N668 COMMD1 COMM domain-containing protein 1 yes yes 1 0 0 By MS/MS 1 0 1 1 101.95 107.22 2 0.037645 87029 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 76.478 54.707 3653800 3653800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 312 3356 287 2732 2270 2270 0 AAGEVLEPANLLAEEK Unmodified 1652.8621 0.86211612 5237 Q9Y5K8 ATP6V1D V-type proton ATPase subunit D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.916 79.963 2 0.0029244 92492 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 61.435 31.5 37323000 0 0 0 1992200 2005400 6096000 1935800 0 2161800 3686200 3545400 2961000 3468200 4091900 5379200 313 5237 288 2733;2734;2735;2736;2737;2738;2739;2740;2741;2742;2743 2271;2272;2273;2274;2275;2276;2277 2272 7 AAGFERPSPVQLK Unmodified 1398.7619 0.76194857 4902 Q9UHI6 DDX20 Probable ATP-dependent RNA helicase DDX20 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 49.86 50.008 3 0.0057132 55268 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.511 7.0852 196410000 0 0 0 14701000 14385000 0 18495000 0 15028000 23031000 21777000 36278000 0 18788000 33922000 314 4902 289 2744;2745;2746;2747;2748;2749;2750;2751;2752 2278;2279;2280;2281;2282;2283;2284 2279 6 AAGFKDPLLASGTDGVGTK Unmodified 1803.9367 0.93667805 1134 P22102 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By matching 8.83 2.61 1 5 1 1 1 1 1 1 68.14 67.364 3 6.6837E-06 83450 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 45.916 39.884 36654000 0 10239000 0 3543900 3747900 0 6183000 0 0 0 0 0 5994700 6945100 0 315 1134 290 2753;2754;2755;2756;2757;2758 2285;2286 2285 1 AAGFNVLR Unmodified 846.47119 0.47118627 2175 Q0VDF9 HSPA14 Heat shock 70 kDa protein 14 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 51.569 52.007 2 0.013612 58039 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 71.949 35.393 41793000 0 0 0 0 0 0 0 0 0 4279700 9827900 9874500 0 5937100 11874000 316 2175 291 2759;2760;2761;2762;2763 2287;2288;2289;2290 2290 4 AAGGAVAAAPECR Acetyl (Protein N-term) 1241.5823 0.58226964 4988 Q9UL63 MKLN1 Muskelin yes yes 1 0 0 By MS/MS By MS/MS 10 0 2 1 1 39.871 40.188 2 0.0013494 44791 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 77.379 65.531 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 317 4988 292 2764;2765 2291;2292 2292 2 AAGGDHGSPDSYR Acetyl (Protein N-term) 1330.5538 0.55380628 1285 P30566 ADSL Adenylosuccinate lyase yes yes 1 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 20.483 20.975 2 3.7186E-07 20766 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 92.611 77.937 15249000 0 0 0 0 0 0 0 0 0 0 4542200 0 0 3312800 7393700 318 1285 293 2766;2767;2768 2293 2293 1 AAGGDHGSPDSYRSPLASR Acetyl (Protein N-term) 1941.8929 0.89291575 1285 P30566 ADSL Adenylosuccinate lyase yes yes 1 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 42.547 43.04 3 3.8329E-06 47104 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 69.605 52.116 54874000 0 0 0 0 0 0 0 0 0 0 20640000 22847000 0 11387000 0 319 1285 294 2769;2770;2771 2294;2295;2296 2295 3 AAGGSDPRAGDVEEDASQLIFPK Acetyl (Protein N-term) 2371.1292 0.12918286 290 O15514 POLR2D DNA-directed RNA polymerase II subunit RPB4 yes yes 1 0 1 By MS/MS 2.5 0.5 2 2 4 88.272 84.228 2;3 1.2439E-67 104524 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 148.41 128.3 289150000 0 289150000 0 0 0 0 0 0 0 0 0 0 0 0 0 320 290 295 2772;2773;2774;2775 2297;2298;2299 2298 3 AAGHPGDPESQQR Unmodified 1348.612 0.61198986 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 6.7471 6.6035 3 2.5273E-25 4113 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 158.42 142.04 661050000 0 28897000 0 25444000 25346000 61236000 49893000 30987000 34031000 72340000 53420000 69225000 45005000 64412000 100810000 321 5187 296 2776;2777;2778;2779;2780;2781;2782;2783;2784;2785;2786;2787;2788 2300;2301;2302;2303;2304;2305;2306;2307;2308;2309;2310;2311;2312 2303 12 AAGHPGDPESQQRLAQVAK Unmodified 1958.9922 0.99223587 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 6 2 2 2 36.081 31.191 3;4 1.7798E-28 43224 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 120.63 111.1 2203400000 1682600000 86413000 434380000 0 0 0 0 0 0 0 0 0 0 0 0 322 5187 297 2789;2790;2791;2792;2793;2794 2313;2314;2315;2316;2317 2316 4 AAGIDEQENWHEGK Unmodified 1582.7012 0.7011988 1240 P28838 LAP3 Cytosol aminopeptidase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.25 3.34 4 2 2 1 4 1 1 1 36.211 32.717 2;3 0.00076307 40456 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 93.348 88.643 297870000 16265000 255360000 4575300 0 0 0 0 0 0 0 0 0 0 5530900 16136000 323 1240 298 2795;2796;2797;2798;2799;2800;2801;2802 2318;2319;2320;2321;2322;2323 2321 3 AAGISLIVPGK Unmodified 1024.6281 0.62808085 1523 P47736 RAP1GAP Rap1 GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 72.829 72.874 2 0.015412 83631 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 44.753 24.615 45785000 0 0 0 2717300 3775100 4837700 4474400 3703000 3015100 4775900 0 7292500 0 4057300 7136200 324 1523 299 2803;2804;2805;2806;2807;2808;2809;2810;2811;2812 2324;2325;2326;2327 2326 3 AAGLATMISTMRPDIDNMDEYVR 3 Oxidation (M) 2617.1822 0.18222276 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 3 1 By MS/MS By MS/MS 10 0 2 1 1 69.03 69.261 3 2.4003E-07 78833 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.876 47.351 38192000 0 0 0 0 0 14088000 0 0 0 0 0 0 0 0 24103000 325 516 300 2813;2814 2328 2328 662;663;664 1 AAGLPGAALPLRK Unmodified 1233.7557 0.75574098 1112 P20749 BCL3 B-cell lymphoma 3 protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.907 61.011 3 0.00032943 68794 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.262 61.922 107850000 0 0 0 6338200 5476500 6759700 8085200 8612500 7185900 10553000 13320000 10083000 8110200 8750200 14572000 326 1112 301 2815;2816;2817;2818;2819;2820;2821;2822;2823;2824;2825;2826 2329;2330;2331;2332;2333;2334;2335;2336;2337;2338;2339;2340;2341 2332 13 AAGLQAEIGQVK Unmodified 1183.6561 0.65608651 3217 Q8IUD2 ERC1 ELKS/Rab6-interacting/CAST family member 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 59.017 53.679 2 0.0056539 68620 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.277 66.96 128680000 0 128680000 0 0 0 0 0 0 0 0 0 0 0 0 0 327 3217 302 2827;2828 2342 2342 1 AAGMNMEEEEELQQNLWGLK Unmodified 2319.0511 0.051132232 2241 Q13144 EIF2B5 Translation initiation factor eIF-2B subunit epsilon yes yes 0 0 0 By MS/MS 2 0 1 1 93.259 88.349 3 1.4854E-05 109677 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.2 60.172 35539000 0 35539000 0 0 0 0 0 0 0 0 0 0 0 0 0 328 2241 303 2829 2343 2343 1 AAGMNMEEEEELQQNLWGLK Oxidation (M) 2335.046 0.046046854 2241 Q13144 EIF2B5 Translation initiation factor eIF-2B subunit epsilon yes yes 0 1 0 By MS/MS 2 0 1 1 90.076 85.18 3 4.2534E-05 105899 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 51.348 42.988 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 329 2241 303 2830 2344 2344 3641;3642 1 AAGMSSPGAQSHPEELPR Unmodified 1820.8475 0.84754546 2295 Q13459 MYO9B Unconventional myosin-IXb yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 37.724 37.652 3 0.0052717 40758 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.981 22.514 27763000 0 0 0 4979700 5903000 0 0 0 0 0 0 0 0 0 16880000 330 2295 304 2831;2832;2833 2345 2345 1 AAGMSSPGAQSHPEELPR Oxidation (M) 1836.8425 0.84246009 2295 Q13459 MYO9B Unconventional myosin-IXb yes yes 0 1 0 By MS/MS 10 0 1 1 28.526 29.23 3 0.00011866 31086 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.437 47.077 14331000 0 0 0 0 0 0 0 0 0 0 0 14331000 0 0 0 331 2295 304 2834 2346 2346 3758 1 AAGMSSPGAQSHPEELPRGASTPSEK Oxidation (M) 2594.2031 0.20309286 2295 Q13459 MYO9B Unconventional myosin-IXb yes yes 0 1 1 By MS/MS 2 0 2 2 35.198 31.855 3;4 5.7711E-07 40152 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 66.383 58.391 26461000 0 0 26461000 0 0 0 0 0 0 0 0 0 0 0 0 332 2295 305 2835;2836 2347;2348 2347 3758 2 AAGNASFSK Unmodified 851.41373 0.41373097 499 O75446 SAP30 Histone deacetylase complex subunit SAP30 yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 9.0627 9.1907 2 0.040615 7835 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 44.349 17.387 8909000 0 0 0 1514700 0 0 2254300 0 1091200 610670 0 0 1485500 0 1952500 333 499 306 2837;2838;2839;2840;2841;2842 2349 2349 1 AAGNESFR Unmodified 850.39333 0.39332988 2577 Q15785 TOMM34 Mitochondrial import receptor subunit TOM34 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 10.855 10.945 2 0.019504 9554 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 63.565 32.276 57058000 0 0 0 6505300 4601000 7445100 8332100 0 6189800 4629200 0 0 5152700 6017900 8184500 334 2577 307 2843;2844;2845;2846;2847;2848;2849;2850;2851 2350;2351 2351 1 AAGNPGSLAAPIDHK Unmodified 1417.7314 0.73137672 2427 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.497 39.675 3 0.0027633 44009 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 28.319 20.564 98816000 0 0 0 6551400 3238400 7433800 4542600 4266500 5720800 7976300 13455000 9712200 10259000 9294900 16365000 335 2427 308 2852;2853;2854;2855;2856;2857;2858;2859;2860;2861;2862;2863 2352;2353;2354;2355;2356;2357 2355 6 AAGNSEFTLPAPSK Unmodified 1388.6936 0.69359423 4551 Q9NPG3 UBN1 Ubinuclein-1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 60.142 60.299 2 0.0088237 68739 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 68.069 51.043 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 336 4551 309 2864;2865 2358;2359 2358 2 AAGPELRVEGWK Unmodified 1311.6935 0.69353465 2780 Q5T6V5 C9orf64 UPF0553 protein C9orf64 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 66.938 59.831 3 0.028864 79708 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.095 31.77 398840000 327080000 71761000 0 0 0 0 0 0 0 0 0 0 0 0 0 337 2780 310 2866;2867 2360 2360 1 AAGPGLGNVAMGPR Oxidation (M) 1282.6452 0.64520425 183 O14497 ARID1A AT-rich interactive domain-containing protein 1A yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 43.206 43.398 2 0.0014308 48143 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 51.445 43.774 22442000 0 0 0 0 3612100 0 3865000 0 0 0 6149900 8815400 0 0 0 338 183 311 2868;2869;2870;2871 2361;2362;2363 2362 252 3 AAGPGLGNVAMGPR Unmodified 1266.6503 0.65028963 183 O14497 ARID1A AT-rich interactive domain-containing protein 1A yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 55.863 55.648 2 0.0070672 63034 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 61.161 41.4 5366700 0 0 0 0 2786400 0 2580300 0 0 0 0 0 0 0 0 339 183 311 2872;2873 2364 2364 0 AAGPISER Acetyl (Protein N-term) 841.42938 0.42938104 2533 Q15427 SF3B4 Splicing factor 3B subunit 4 yes yes 1 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.491 33.676 2 0.0014054 36386 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 111.01 87.988 1413500000 0 0 0 73790000 109360000 102880000 138340000 114400000 74208000 103690000 141170000 204820000 113020000 124630000 113200000 340 2533 312 2874;2875;2876;2877;2878;2879;2880;2881;2882;2883;2884;2885 2365;2366;2367;2368;2369;2370;2371;2372;2373;2374;2375;2376;2377 2376 13 AAGPISERNQDATVYVGGLDEK Acetyl (Protein N-term) 2331.1343 0.13426824 2533 Q15427 SF3B4 Splicing factor 3B subunit 4 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8 3.28 1 2 8 1 2 1 1 1 1 1 1 1 1 75.409 74.371 3 4.7406E-50 88076 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 137.72 132.78 2063200000 874430 1875400000 0 0 15143000 0 23002000 27103000 20841000 24409000 0 39602000 15205000 21702000 0 341 2533 313 2886;2887;2888;2889;2890;2891;2892;2893;2894;2895;2896 2378;2379;2380;2381;2382;2383;2384;2385;2386 2382 9 AAGPLQLR Unmodified 824.48684 0.48683634 1107 P20618 PSMB1 Proteasome subunit beta type-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 42.379 42.547 2 0.0084735 47612 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 86.086 41.476 149570000 0 0 0 11504000 8622800 10697000 12254000 11491000 7851700 16204000 18473000 17688000 14368000 0 20419000 342 1107 314 2897;2898;2899;2900;2901;2902;2903;2904;2905;2906;2907 2387;2388;2389;2390;2391;2392;2393;2394 2392 7 AAGPSLSHTSGGTQSK Unmodified 1484.7219 0.72193424 1221 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.11 3.8 6 1 12 2 3 2 1 1 1 1 1 1 1 1 1 1 1 1 13.604 12.488 2;3 9.5032E-81 17904 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 202 178.63 2014600000 954440000 646580000 127090000 13541000 12983000 35673000 23095000 14638000 11677000 36399000 25263000 32295000 23416000 22841000 34696000 343 1221 315 2908;2909;2910;2911;2912;2913;2914;2915;2916;2917;2918;2919;2920;2921;2922;2923;2924;2925;2926 2395;2396;2397;2398;2399;2400;2401;2402;2403;2404;2405;2406;2407;2408;2409;2410;2411;2412;2413;2414;2415;2416;2417;2418 2407 20 AAGQGDMRQEPK Oxidation (M) 1302.5986 0.59864799 2003 P82970 HMGN5 High mobility group nucleosome-binding domain-containing protein 5 yes yes 0 1 1 By MS/MS 2.5 0.5 2 2 4 5.8638 2.563 2;3 0.00087202 4593 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.34 76.761 266210000 0 266210000 0 0 0 0 0 0 0 0 0 0 0 0 0 344 2003 316 2927;2928;2929;2930 2419;2420;2421 2420 3249 2 AAGQGDMRQEPK Unmodified 1286.6037 0.60373336 2003 P82970 HMGN5 High mobility group nucleosome-binding domain-containing protein 5 yes yes 0 0 1 By MS/MS By MS/MS By matching 2 0 3 1 1 1 9.6134 6.4922 3 0.048087 9464 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 49.423 34.051 69831000 8191400 60759000 881020 0 0 0 0 0 0 0 0 0 0 0 0 345 2003 316 2931;2932;2933 2422 2422 0 AAGQPYEQHAK Unmodified 1198.5731 0.57308516 234 O14976 GAK Cyclin-G-associated kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 7.5632 7.1965 2;3 0.0016978 8731 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.744 78.561 196780000 0 21192000 0 13307000 5824100 7079500 11262000 9865300 8984400 11678000 41922000 20695000 12125000 6364900 26481000 346 234 317 2934;2935;2936;2937;2938;2939;2940;2941;2942;2943;2944;2945;2946;2947 2423;2424;2425;2426 2423 4 AAGQTVVAQPVHMQQLLK Unmodified 1918.0459 0.045851341 3915 Q96L91 EP400 E1A-binding protein p400 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72.266 71.549 3 0.0014436 81489 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.454 33.697 116940000 20209000 0 3270900 3827600 3791800 9244200 4786000 9410400 5929500 9183600 7097200 7786500 5068700 9147800 18183000 347 3915 318 2948;2949;2950;2951;2952;2953;2954;2955;2956;2957;2958;2959;2960;2961 2427;2428;2429;2430 2427 4 AAGSDLLDEVFFNSEVDEK Acetyl (Protein N-term) 2125.9692 0.96915997 137 O00268 TAF4 Transcription initiation factor TFIID subunit 4 yes yes 1 0 0 By MS/MS 2 0 1 1 100.28 95.568 2 6.1343E-18 118216 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 143.25 126.04 26558000 0 26558000 0 0 0 0 0 0 0 0 0 0 0 0 0 348 137 319 2962 2431 2431 1 AAGSGELGVTMK Oxidation (M) 1135.5543 0.55432356 487 O75369 FLNB Filamin-B yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 6.12 3.89 3 1 4 1 2 1 1 1 1 1 26.461 24.062 2 3.8422E-15 30760 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 147.41 97.991 133180000 9962300 112230000 1417400 0 0 4112200 3820100 0 0 0 0 0 0 1632200 0 349 487 320 2963;2964;2965;2966;2967;2968;2969;2970 2432;2433;2434;2435;2436 2433 609 5 AAGSGELGVTMK Unmodified 1119.5594 0.55940893 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 40.656 40.27 2 0.0054179 50962 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.499 44.601 312400000 0 262640000 0 0 0 4057400 0 0 0 0 7565800 8519800 5916100 6409400 17292000 350 487 320 2971;2972;2973;2974;2975;2976;2977 2437;2438;2439;2440 2438 4 AAGSPSSSDQDEKLPGQDESTAGTSEQNDILK Unmodified 3261.4757 0.47568171 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 55.716 55.914 3 2.572E-08 63443 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 35.923 26.127 61116000 0 0 0 0 6049600 2128000 4587800 4934000 2578700 4568900 9327100 7573600 4836600 5091300 9440400 351 5216 321 2978;2979;2980;2981;2982;2983;2984;2985;2986;2987;2988 2441;2442;2443;2444;2445;2446;2447;2448 2441 8 AAGTAAALAFLSQESR Acetyl (Protein N-term) 1604.8158 0.81583463 523 O75607 NPM3 Nucleoplasmin-3 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 96.914 96.996 2 6.0769E-216 113047 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 232.42 185.78 382840000 0 0 0 3313800 20526000 10127000 14086000 23955000 12819000 67120000 53762000 40550000 13497000 29653000 93436000 352 523 322 2989;2990;2991;2992;2993;2994;2995;2996;2997;2998;2999;3000 2449;2450;2451;2452;2453;2454;2455;2456;2457;2458;2459;2460;2461 2459 13 AAGTDSFNGHPPQGCASTPVAR Unmodified 2196.9971 0.99706325 4683 Q9NVU0 POLR3E DNA-directed RNA polymerase III subunit RPC5 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 40.348 40.763 3 0.015357 44484 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 27.61 22.993 16039000 0 0 0 0 0 2696800 0 0 0 0 6179500 0 0 0 7162300 353 4683 323 3001;3002;3003 2462 2462 1 AAGTLYTYPENWR Acetyl (Protein N-term) 1582.7416 0.74160705 1211 P26641 EEF1G Elongation factor 1-gamma yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 84.29 83.982 2 6.8887E-63 97442 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 224.64 224.64 1266600000 0 178280000 0 23755000 39020000 98789000 44710000 58608000 38261000 114010000 119170000 111890000 57308000 100940000 281890000 354 1211 324 3004;3005;3006;3007;3008;3009;3010;3011;3012;3013;3014;3015;3016 2463;2464;2465;2466;2467;2468;2469;2470;2471;2472;2473;2474;2475;2476;2477;2478 2471 16 AAGTLYTYPENWRAFK Acetyl (Protein N-term) 1928.9421 0.94209778 1211 P26641 EEF1G Elongation factor 1-gamma yes yes 1 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 88.916 85.402 2 6.8037E-210 106245 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 253.76 232.72 131970000 0 128470000 3490500 0 0 0 0 0 0 0 0 0 0 0 0 355 1211 325 3017;3018;3019 2479;2480;2481 2479 3 AAGVAGWGVEAEEFEDAPDVEPLEPTLSNIIEQR Acetyl (Protein N-term) 3679.753 0.75296619 353 O43681 ASNA1 ATPase ASNA1 yes yes 1 0 0 By MS/MS By MS/MS 2 0 2 1 1 100.55 95.287 3 1.0301E-26 119458 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.975 72.308 15972000 12021000 0 3951900 0 0 0 0 0 0 0 0 0 0 0 0 356 353 326 3020;3021 2482;2483 2482 2 AAGVDCGDGVGAR Acetyl (Protein N-term) 1245.5408 0.54079876 2794 Q5TBB1 RNASEH2B Ribonuclease H2 subunit B yes yes 1 0 0 By MS/MS By MS/MS 10 0 2 1 1 36.422 36.727 2 0.0013065 39586 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 51.268 41.68 2961500 0 0 0 0 0 0 0 0 0 0 0 0 0 2961500 0 357 2794 327 3022;3023 2484;2485 2485 2 AAGVEAAAEVAATEIK Acetyl (Protein N-term) 1541.7937 0.7937022 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.53 3.66 1 3 2 13 3 2 1 1 1 1 1 1 1 1 1 1 2 1 1 94.735 93.845 2;3 2.8824E-98 108896 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 238.98 209.21 2178700000 114180000 368590000 3941200 20746000 154130000 101740000 82885000 109760000 80512000 285600000 200770000 185290000 82592000 144380000 243540000 358 1681 328 3024;3025;3026;3027;3028;3029;3030;3031;3032;3033;3034;3035;3036;3037;3038;3039;3040;3041;3042 2486;2487;2488;2489;2490;2491;2492;2493;2494;2495;2496;2497;2498;2499;2500;2501;2502;2503;2504;2505;2506;2507;2508;2509;2510;2511;2512;2513;2514;2515;2516;2517 2512 31 AAGVNVEPFWPGLFAK Unmodified 1701.8879 0.88787736 806 P05386 RPLP1 60S acidic ribosomal protein P1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.91 3.42 2 1 8 1 2 1 1 1 1 1 1 1 1 95.907 94.534 2 7.5638E-16 116710 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 114.86 100.23 106870000 46098000 25594000 0 0 0 1332500 0 3460300 1516100 4682500 4009500 0 887530 1728700 17559000 359 806 329 3043;3044;3045;3046;3047;3048;3049;3050;3051;3052;3053 2518;2519;2520;2521;2522 2521 5 AAGVRDVFERPSAK Unmodified 1501.8001 0.80012499 1756 P55081 MFAP1 Microfibrillar-associated protein 1 yes yes 0 0 2 By MS/MS 10 0 1 1 36.516 37.263 3 0.027206 40677 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 36.916 24.355 20571000 0 0 0 0 0 0 0 0 0 0 0 20571000 0 0 0 360 1756 330 3054 2523 2523 1 AAGVVLEMIR Oxidation (M) 1073.5903 0.59031513 5077 Q9Y230 RUVBL2 RuvB-like 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.578 58.694 2 0.0057464 66449 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 59.35 42.839 166670000 0 0 0 9355700 8159600 12028000 12613000 10914000 9713700 13745000 17076000 20780000 16740000 13640000 21908000 361 5077 331 3055;3056;3057;3058;3059;3060;3061;3062;3063;3064;3065;3066 2524;2525;2526;2527;2528;2529;2530;2531;2532;2533 2528 6460 10 AAGVVLEMIR Unmodified 1057.5954 0.59540051 5077 Q9Y230 RUVBL2 RuvB-like 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.446 77.504 2 0.00052219 88806 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 126.41 96.227 192650000 0 0 0 8252900 8653600 13532000 9604900 11363000 9168700 18917000 21015000 23412000 13516000 16422000 38789000 362 5077 331 3067;3068;3069;3070;3071;3072;3073;3074;3075;3076;3077;3078 2534;2535;2536;2537;2538;2539;2540;2541;2542;2543;2544;2545;2546 2537 13 AAGYDLYSAYDYTIPPMEK Oxidation (M) 2182.9769 0.97688788 1330 P33316 DUT Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial yes yes 0 1 0 By matching By MS/MS 10 0 2 1 1 81.372 81.577 2 0.0014818 94095 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.475 33.594 12518000 0 0 0 0 0 0 0 0 0 0 3045600 0 0 0 9472200 363 1330 332 3079;3080 2547 2547 1984 1 AAGYNFYGTER Unmodified 1247.5571 0.55710075 4479 Q9H9Y6 POLR1B DNA-directed RNA polymerase I subunit RPA2 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 46.669 47.05 2 0.016481 52085 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 44.318 34.73 12681000 0 0 0 0 0 0 0 0 0 4022900 0 0 0 2386900 6270800 364 4479 333 3081;3082;3083 2548;2549 2549 2 AAHDESPGNNVVDISVPPTTDGQK Unmodified 2447.1565 0.15646024 2593 Q15907 RAB11B Ras-related protein Rab-11B yes yes 0 0 0 By matching By matching By MS/MS By matching 10 0 6 1 2 2 1 63.501 63.612 3 0.001534 72466 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 18.904 14.923 27498000 0 0 0 0 1876400 0 0 0 6251200 0 10722000 0 8648700 0 0 365 2593 334 3084;3085;3086;3087;3088;3089 2550;2551 2550 2 AAHDNMDIDK Oxidation (M) 1144.4819 0.48188689 4390;1804 Q9H444;P59074 CHMP4B;CHMP4BP1 Charged multivesicular body protein 4b;Putative charged multivesicular body protein 4B-like protein CHMP4BP1 no no 0 1 0 By matching By MS/MS 2.6 0.49 2 3 1 4 6.602 3.2272 2;3 0.0054356 5318 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.438 50.597 117740000 215520 117520000 0 0 0 0 0 0 0 0 0 0 0 0 0 366 4390;1804 335 3090;3091;3092;3093;3094 2552;2553;2554;2555 2553 2926;5847 3 AAHDNMDIDK Unmodified 1128.487 0.48697227 4390;1804 Q9H444;P59074 CHMP4B;CHMP4BP1 Charged multivesicular body protein 4b;Putative charged multivesicular body protein 4B-like protein CHMP4BP1 no no 0 0 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 14.146 13.327 2 5.4268E-11 16677 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 176.6 132.2 34632000 0 28555000 0 0 0 0 0 0 0 0 3046700 0 0 0 3030700 367 4390;1804 335 3095;3096;3097 2556;2557;2558;2559 2557 4 AAHDNMDIDKVDELMQDIADQQELAEEISTAISK Oxidation (M) 3801.7561 0.75607901 4390 Q9H444 CHMP4B Charged multivesicular body protein 4b yes yes 0 1 1 By MS/MS 2 0 1 1 100.62 92.485 4 4.4943E-52 119121 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.405 91.449 21861000 21861000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 368 4390 336 3098 2560 2560 5847 1 AAHDNMDIDKVDELMQDIADQQELAEEISTAISK Unmodified 3785.7612 0.76116439 4390 Q9H444 CHMP4B Charged multivesicular body protein 4b yes yes 0 0 1 By MS/MS 2 0 1 1 101.12 92.99 4 1.7895E-70 119706 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 112.15 107.29 44485000 44485000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 369 4390 336 3099 2561 2561 1 AAHDNMDIDKVDELMQDIADQQELGEEISTAISK Oxidation (M) 3787.7404 0.74042894 1804 P59074 CHMP4BP1 Putative charged multivesicular body protein 4B-like protein CHMP4BP1 yes yes 0 1 1 By MS/MS 2 0 1 1 102.12 93.992 4 2.7742E-06 120935 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.024 40.422 14404000 14404000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 370 1804 337 3100 2562 2562 2926;2927 1 AAHGCVTAVSGK Unmodified 1156.5659 0.56589129 495 O75410 TACC1 Transforming acidic coiled-coil-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 14.145 10.097 3 0.034748 15215 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 21.596 0 13349000 13349000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 371 495 338 3101 2563 2563 1 AAHGGSAASSALK Acetyl (Protein N-term) 1168.5836 0.58364985 598 O94888 UBXN7 UBX domain-containing protein 7 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 7.87 3.56 1 2 1 11 2 2 1 1 1 1 1 1 1 1 1 1 1 27.777 27.418 2 3.7784E-10 21292 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 136.02 100.73 1147000000 54248000 553940000 0 31716000 0 60177000 51899000 29398000 32945000 58183000 70816000 48785000 43232000 43546000 68069000 372 598 339 3102;3103;3104;3105;3106;3107;3108;3109;3110;3111;3112;3113;3114;3115;3116 2564;2565;2566;2567;2568;2569;2570;2571;2572;2573;2574;2575;2576 2568 11 AAHSEGNTTAGLDMR Unmodified 1529.6893 0.68925391 1980 P78371 CCT2 T-complex protein 1 subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 26.305 26.505 2;3 1.2595E-205 26990 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 249.98 236.53 1951500000 0 0 0 80255000 95753000 244500000 116920000 110770000 69579000 188080000 239380000 182420000 148450000 198220000 277190000 373 1980 340 3117;3118;3119;3120;3121;3122;3123;3124;3125;3126;3127;3128;3129;3130;3131;3132;3133;3134;3135;3136;3137;3138;3139;3140 2577;2578;2579;2580;2581;2582;2583;2584;2585;2586;2587;2588;2589;2590;2591;2592;2593;2594;2595;2596;2597;2598;2599;2600;2601;2602 2586 18 AAHSEGNTTAGLDMR Oxidation (M) 1545.6842 0.68416853 1980 P78371 CCT2 T-complex protein 1 subunit beta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 14.437 14.658 3 0.00010787 14174 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 65.038 45.2 681190000 0 0 0 0 52257000 0 65653000 0 50026000 0 113920000 137690000 116260000 0 145390000 374 1980 340 3141;3142;3143;3144;3145;3146;3147 2603;2604;2605;2606;2607;2608;2609 2607 3190 6 AAHTEDINACTLTTSPR Unmodified 1856.8687 0.86867484 769 P04049 RAF1 RAF proto-oncogene serine/threonine-protein kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 44.315 44.696 3 8.7212E-32 50199 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 121.95 115.92 40174000 0 0 0 0 0 0 9770900 0 0 0 0 0 14786000 0 15618000 375 769 341 3148;3149;3150;3151;3152;3153;3154;3155 2610;2611;2612;2613;2614;2615;2616;2617;2618 2616 9 AAHYCHSTLK Unmodified 1186.5553 0.55532661 3813 Q96EK5 KIAA1279 KIF1-binding protein yes yes 0 0 0 By MS/MS 2 0 1 1 11.086 7.2123 3 0.011998 11571 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.649 40.982 66923000 66923000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 376 3813 342 3156 2619 2619 1 AAIAASEVLVDSAEEGSLAAAAELAAQK Acetyl (Protein N-term) 2697.3709 0.37086969 706 O95926 SYF2 Pre-mRNA-splicing factor SYF2 yes yes 1 0 0 By MS/MS 2 0 1 1 104.76 96.63 3 1.5364E-154 124077 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 127.38 120.58 7845800 7845800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 377 706 343 3157 2620 2620 1 AAIAQLNGK Unmodified 884.50797 0.50796571 3948 Q96PK6 RBM14 RNA-binding protein 14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.55 1 1 4 2 1 1 1 1 29.487 27.248 2 0.017054 34864 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.307 49.14 84265000 0 69369000 0 0 7260700 0 0 0 0 0 0 0 0 7635700 0 378 3948 344 3158;3159;3160;3161;3162;3163 2621;2622;2623;2624 2622 3 AAIASIPVGSFEAGASGRPGPAPR Unmodified 2235.176 0.17601389 3968 Q96RK0 CIC Protein capicua homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.264 76.322 3 2.9778E-11 87683 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.137 58.145 168090000 0 0 0 7854200 10249000 13315000 11996000 15161000 10298000 15634000 14154000 18405000 10638000 15832000 24554000 379 3968 345 3164;3165;3166;3167;3168;3169;3170;3171;3172;3173;3174;3175 2625;2626;2627;2628;2629;2630;2631;2632;2633;2634;2635;2636 2628 12 AAIDWFDGK Unmodified 1021.4869 0.48689592 3664;1363 Q92804;P35637 TAF15;FUS TATA-binding protein-associated factor 2N;RNA-binding protein FUS no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.07 3.35 5 2 21 2 4 1 1 2 2 2 1 2 1 2 2 2 2 2 74.187 73.276 2 0.0030909 85092 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 127.56 34.191 4084900000 89147000 1334000000 64592000 156930000 150870000 264400000 173060000 135990000 182270000 204990000 225860000 287890000 219840000 236460000 358530000 380 3664;1363 346 3176;3177;3178;3179;3180;3181;3182;3183;3184;3185;3186;3187;3188;3189;3190;3191;3192;3193;3194;3195;3196;3197;3198;3199;3200;3201;3202;3203 2637;2638;2639;2640;2641;2642;2643;2644;2645;2646;2647;2648;2649;2650;2651;2652;2653;2654;2655;2656;2657;2658;2659 2649 19 AAIEAFNK Unmodified 862.45487 0.45486751 4895 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 34.838 34.622 2 0.010495 38035 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 79.469 40.662 945220000 0 395490000 0 19223000 27782000 47015000 36194000 41736000 29704000 47023000 80809000 50913000 51728000 42601000 75000000 381 4895 347 3204;3205;3206;3207;3208;3209;3210;3211;3212;3213;3214;3215;3216 2660;2661;2662;2663;2664;2665;2666;2667;2668;2669 2668 10 AAIEHELPTATQK Unmodified 1407.7358 0.73579339 2999 Q6ZMI0 PPP1R21 Protein phosphatase 1 regulatory subunit 21 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 41.846 37.347 3 0.0026556 48741 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 52.891 35.68 55454000 0 50590000 4864100 0 0 0 0 0 0 0 0 0 0 0 0 382 2999 348 3217;3218;3219 2670;2671;2672 2670 3 AAIGLLAR Unmodified 783.49667 0.49667274 847 P07741 APRT Adenine phosphoribosyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.137 55.268 2 0.022888 63666 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 60.788 9.822 212460000 0 0 0 11772000 7770000 16441000 13667000 12829000 5331900 14394000 23344000 26185000 12061000 16447000 52216000 383 847 349 3220;3221;3222;3223;3224;3225;3226;3227;3228;3229;3230;3231 2673;2674;2675;2676 2676 4 AAIIADSSTFRVDTAVIK Unmodified 1877.0258 0.025827405 329 O43432 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 0 0 1 By MS/MS 2 0 1 1 84.234 76.103 3 0.031564 99502 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 19.819 12.589 5689100 5689100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 384 329 350 3232 2677 2677 1 AAIISAEGDSK Unmodified 1060.5401 0.5400537 1343 P35232 PHB Prohibitin yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 26.809 26.634 2 0.03465 28765 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 37.696 14.173 6227200 0 0 0 0 2682200 0 3545100 0 0 0 0 0 0 0 0 385 1343 351 3233;3234 2678 2678 1 AAILDLEK Unmodified 871.50148 0.50148335 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 62.784 56.795 2 0.018072 72874 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.296 8.8333 182240000 12587000 162260000 7391700 0 0 0 0 0 0 0 0 0 0 0 0 386 2495 352 3235;3236;3237 2679 2679 1 AAILPTSIFLTNK Unmodified 1387.8075 0.80750177 208 O14744 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 90.379 89.263 2 3.3735E-08 103774 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 106.29 95.461 315610000 57107000 74034000 3982000 3980400 6646500 13781000 8229100 11517000 9291200 16555000 16530000 16781000 10399000 15545000 51232000 387 208 353 3238;3239;3240;3241;3242;3243;3244;3245;3246;3247;3248;3249;3250;3251;3252;3253 2680;2681;2682;2683;2684;2685;2686;2687;2688;2689;2690;2691;2692;2693;2694;2695;2696 2695 16 AAILPTSIFLTNKK Unmodified 1515.9025 0.90246479 208 O14744 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 83.504 82.559 3 0.00094575 95209 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.482 35.473 29013000 6436900 0 0 984130 0 2061600 1421500 2516200 1589400 0 2053400 0 0 0 11950000 388 208 354 3254;3255;3256;3257;3258;3259;3260;3261 2697;2698;2699;2700 2697 4 AAILQTEVDALR Unmodified 1298.7194 0.71941505 3217;250 Q8IUD2;O15083 ERC1;ERC2 ELKS/Rab6-interacting/CAST family member 1;ERC protein 2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 75.092 75.118 2 0.00024089 86561 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 83.647 60.959 79484000 0 0 0 3098200 4711400 7135500 7725700 5053000 6248200 12564000 13114000 13827000 6006800 0 0 389 3217;250 355 3262;3263;3264;3265;3266;3267;3268;3269;3270;3271 2701;2702;2703;2704;2705;2706;2707;2708;2709;2710 2702 9 AAIPAGEQAR Unmodified 982.51959 0.51959303 4570 Q9NQG6 MIEF1 Mitochondrial dynamics protein MID51 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.958 20.16 2 0.0060165 20709 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 66.621 50.327 252470000 0 0 0 13241000 15917000 16356000 21125000 18283000 13967000 23884000 25351000 41357000 19586000 18351000 25052000 390 4570 356 3272;3273;3274;3275;3276;3277;3278;3279;3280;3281;3282;3283 2711;2712 2711 1 AAIQSQLDGVR Unmodified 1156.62 0.62003536 419 O60645 EXOC3 Exocyst complex component 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.75 43.869 2 0.00028318 48078 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 93.111 19.126 121050000 0 0 0 6954100 6198200 11770000 12409000 8662500 0 16483000 15250000 0 14790000 8358700 20171000 391 419 357 3284;3285;3286;3287;3288;3289;3290;3291;3292;3293;3294;3295 2713;2714;2715;2716;2717;2718;2719;2720;2721;2722;2723;2724;2725;2726;2727;2728 2721 16 AAIRDIEGK Unmodified 971.53999 0.53999412 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 23.779 20.282 2 0.00093432 25456 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 152.11 74.794 99123000 0 30591000 68532000 0 0 0 0 0 0 0 0 0 0 0 0 392 4634 358 3296;3297 2729;2730 2730 2 AAISDSADCSLSPDVDPVLAFQR Unmodified 2433.1482 0.14820374 3521 Q8TEW0 PARD3 Partitioning defective 3 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 87.039 87.199 3 0.00042268 101154 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 26.84 23.998 8708000 0 0 0 0 0 0 1108200 2368700 0 2714500 0 0 0 0 2516600 393 3521 359 3298;3299;3300;3301 2731;2732;2733 2731 3 AAISSGIEDPVPTLHLTER Unmodified 2005.048 0.04801941 470 O75175 CNOT3 CCR4-NOT transcription complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 78.959 79.101 3 0.0047181 91385 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 32.682 23.399 109410000 0 0 0 0 0 12819000 0 14698000 12134000 22412000 0 0 0 0 47349000 394 470 360 3302;3303;3304;3305;3306 2734;2735;2736 2735 3 AAIYGGVEGGGTRSEVLLVSEDGK Acetyl (Protein N-term) 2405.2074 0.20743318 4934 Q9UJ70 NAGK N-acetyl-D-glucosamine kinase yes yes 1 0 1 By MS/MS By MS/MS By MS/MS 2.33 0.471 2 1 1 1 1 85.904 81.309 3 2.0817E-09 98473 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 73.405 64.586 35491000 22087000 7915800 5488400 0 0 0 0 0 0 0 0 0 0 0 0 395 4934 361 3307;3308;3309 2737;2738;2739 2737 3 AALAAAQYK Unmodified 905.49707 0.49706667 2561 Q15652 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 26.989 27.135 2 0.024472 29464 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 50.632 16.893 9971300 0 0 0 0 2671800 0 0 0 3358200 0 0 0 0 0 3941300 396 2561 362 3310;3311;3312 2740 2740 1 AALAEEQTEVAVK Acetyl (Protein N-term) 1399.7195 0.71947463 2545 Q15542 TAF5 Transcription initiation factor TFIID subunit 5 yes yes 1 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.5 3.35 1 5 1 1 1 1 1 1 72.174 72.349 2 0.00045498 83239 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 63.426 51.579 10281000 0 0 0 0 0 0 0 0 1867900 4609500 3803700 0 0 0 0 397 2545 363 3313;3314;3315;3316;3317;3318 2741;2742;2743;2744;2745 2744 5 AALAHPFFQDVTK Unmodified 1443.751 0.75104953 1180 P24941 CDK2 Cyclin-dependent kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 74.866 69.259 2;3 0.0050738 90865 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.276 38.52 22813000 20931000 0 1882200 0 0 0 0 0 0 0 0 0 0 0 0 398 1180 364 3319;3320;3321 2746;2747;2748;2749 2748 4 AALAHSEEVTASQVAATK Unmodified 1782.9112 0.91119158 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 2 1 1 1 1 41.071 41.275 3 1.7933E-15 46247 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 96.447 87.389 329340000 0 0 0 28276000 25270000 33520000 25667000 29904000 0 33512000 33796000 31266000 27377000 19983000 40767000 399 2501 365 3322;3323;3324;3325;3326;3327;3328;3329;3330;3331;3332;3333 2750;2751;2752;2753;2754;2755;2756;2757;2758;2759;2760 2756 11 AALAPLPPLPAQFK Acetyl (Protein N-term) 1474.8548 0.85478632 4540 Q9NP79 VTA1 Vacuolar protein sorting-associated protein VTA1 homolog yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.22 1 1 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 97.648 97.528 2 1.5518E-06 112660 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 90.629 86.33 373010000 23973000 118890000 0 2147500 7509100 15676000 13213000 9084800 7134300 36986000 27281000 26058000 11961000 18865000 54231000 400 4540 366 3334;3335;3336;3337;3338;3339;3340;3341;3342;3343;3344;3345;3346;3347;3348 2761;2762;2763;2764;2765;2766;2767;2768;2769;2770;2771;2772;2773;2774;2775;2776;2777 2762 17 AALDCSTSHLDEFYSDPHAVAGALK Unmodified 2674.2333 0.23333035 2861 Q68EM7 ARHGAP17 Rho GTPase-activating protein 17 yes yes 0 0 0 By MS/MS 2 0 1 1 81.999 77.295 4 0.0001311 96184 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 30.352 23.076 107870000 0 107870000 0 0 0 0 0 0 0 0 0 0 0 0 0 401 2861 367 3349 2778 2778 1 AALDEAQGVGLDSTGYYDQEIYGGSDSR Unmodified 2936.2948 0.29480422 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 79.503 79.677 3 1.0467E-71 92033 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 111.79 105.43 23627000 0 0 0 0 0 0 0 0 0 9425800 7392600 0 0 0 6808400 402 516 368 3350;3351;3352;3353 2779;2780;2781;2782 2779 4 AALDGTPGMIGYGMAK Oxidation (M) 1567.7374 0.73744965 882 P09417 QDPR Dihydropteridine reductase yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 68.616 63.339 2 5.074E-07 80423 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.08 87.817 146940000 0 146940000 0 0 0 0 0 0 0 0 0 0 0 0 0 403 882 369 3354;3355 2783 2783 1135 1 AALDGTPGMIGYGMAK Unmodified 1551.7425 0.74253503 882 P09417 QDPR Dihydropteridine reductase yes yes 0 0 0 By MS/MS 2 0 1 1 78.64 73.904 2 5.1362E-16 92174 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.55 99.11 200890000 0 200890000 0 0 0 0 0 0 0 0 0 0 0 0 0 404 882 369 3356 2784;2785 2784 2 AALDSLSLFTSLGLSEQK Acetyl (Protein N-term) 1921.0044 0.004423261 1528 P47897 QARS Glutamine--tRNA ligase yes yes 1 0 0 By MS/MS 2 0.816 1 1 1 3 104.47 102.01 2 1.3277E-277 121678 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 270.93 243.5 468590000 0 468590000 0 0 0 0 0 0 0 0 0 0 0 0 0 405 1528 370 3357;3358;3359 2786;2787 2786 2 AALEAAAAAAPER Unmodified 1210.6306 0.63060004 3149 Q86UK7 ZNF598 Zinc finger protein 598 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 40.253 40.567 2 6.4519E-05 44073 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 104.79 85.008 27737000 0 0 0 0 0 0 0 0 0 0 0 0 13346000 14391000 0 406 3149 371 3360;3361 2788;2789 2788 2 AALEALLPYTER Unmodified 1345.7242 0.72416608 2188 Q12788 TBL3 Transducin beta-like protein 3 yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 82.316 82.428 2 0.0061623 94565 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 51.927 28.607 36078000 0 0 0 0 1607800 0 2400700 2874700 2641900 3206800 3037500 4257400 4119700 3465000 8466000 407 2188 372 3362;3363;3364;3365;3366;3367;3368;3369;3370;3371 2790;2791;2792;2793;2794;2795 2794 5 AALEAQNALHNMK Oxidation (M) 1425.7034 0.70344741 3677 Q92879 CELF1 CUGBP Elav-like family member 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.1 3.37 6 1 22 2 3 2 2 1 2 1 2 2 2 2 2 2 2 2 29.486 28.52 2;3 5.1888E-21 40150 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 136.57 126.33 1163000000 108500000 294380000 102970000 33828000 8006500 36644000 11362000 39031000 38037000 65543000 93546000 89778000 82958000 66411000 92040000 408 3677 373 3372;3373;3374;3375;3376;3377;3378;3379;3380;3381;3382;3383;3384;3385;3386;3387;3388;3389;3390;3391;3392;3393;3394;3395;3396;3397;3398;3399;3400 2796;2797;2798;2799;2800;2801;2802;2803;2804;2805;2806;2807;2808;2809;2810;2811;2812;2813;2814 2804 5222 18 AALEAQNALHNMK Unmodified 1409.7085 0.70853279 3677 Q92879 CELF1 CUGBP Elav-like family member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 6 24 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 44.569 43.531 2;3 5.3185E-51 47669 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 179.57 155.42 1941600000 259960000 324000000 121890000 58906000 62778000 72328000 90361000 98119000 77490000 99021000 137540000 143600000 104720000 88000000 202870000 409 3677 373 3401;3402;3403;3404;3405;3406;3407;3408;3409;3410;3411;3412;3413;3414;3415;3416;3417;3418;3419;3420;3421;3422;3423;3424;3425;3426;3427;3428;3429;3430 2815;2816;2817;2818;2819;2820;2821;2822;2823;2824;2825;2826;2827;2828;2829;2830;2831;2832;2833;2834;2835;2836;2837;2838;2839;2840;2841;2842;2843 2841 26 AALEAVGGTVVLE Unmodified 1227.6711 0.67106787 1703 P52815 MRPL12 39S ribosomal protein L12, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 1 0 2 1 1 105 108.08 2 0.014015 90589 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 78.113 68.899 54929000 26719000 28210000 0 0 0 0 0 0 0 0 0 0 0 0 0 410 1703 374 3431;3432 2844;2845 2844 2 AALEEANGEIEK Unmodified 1272.6198 0.61976058 3384 Q8NB16 MLKL Mixed lineage kinase domain-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 34.822 34.295 2 1.4951E-06 37914 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 134.68 101.41 293690000 0 53520000 0 12474000 12870000 21404000 20430000 13519000 14531000 21565000 37359000 28149000 16873000 17027000 23971000 411 3384 375 3433;3434;3435;3436;3437;3438;3439;3440;3441;3442;3443;3444;3445;3446 2846;2847;2848;2849;2850;2851;2852;2853;2854;2855;2856;2857 2854 12 AALEEEVR Unmodified 915.46616 0.46616048 3838 Q96FS4 SIPA1 Signal-induced proliferation-associated protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 27.693 27.444 2 0.035078 29560 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 52.716 1.3703 17352000 0 0 0 17352000 0 0 0 0 0 0 0 0 0 0 0 412 3838 376 3447 2858 2858 1 AALEEFSR Unmodified 921.4556 0.45559579 3687 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.216 40.396 2 0.014414 45112 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 70.525 19.821 394950000 0 0 0 21237000 22812000 29304000 29544000 22860000 20267000 42736000 41989000 37775000 36968000 39039000 50415000 413 3687 377 3448;3449;3450;3451;3452;3453;3454;3455;3456;3457;3458;3459 2859;2860;2861;2862;2863;2864 2862 6 AALEELQR Unmodified 928.49779 0.49779495 3787 Q96CW5 TUBGCP3 Gamma-tubulin complex component 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 36.29 36.298 2 0.018051 39983 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 64.757 22.529 66888000 0 0 0 0 8246700 15300000 9108000 13636000 7718600 12879000 0 0 0 0 0 414 3787 378 3460;3461;3462;3463;3464;3465;3466 2865;2866;2867;2868 2866 4 AALEELVK Unmodified 871.50148 0.50148335 961 P12081 HARS Histidine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 15 1 1 1 2 1 1 1 2 1 2 1 1 53.736 53.897 2 0.017693 61729 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 65.252 26.46 294680000 0 0 0 8616400 7170100 10741000 17946000 12537000 10080000 16911000 53236000 34471000 27381000 27894000 67697000 415 961 379 3467;3468;3469;3470;3471;3472;3473;3474;3475;3476;3477;3478;3479;3480;3481 2869;2870;2871;2872;2873;2874 2869 6 AALEEVEGDVAELELK Unmodified 1713.8673 0.86726108 2491 Q15057 ACAP2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 89.799 86.128 3 0.00070281 106908 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 59.862 37.708 18321000 0 17771000 549630 0 0 0 0 0 0 0 0 0 0 0 0 416 2491 380 3482;3483 2875 2875 1 AALEEVER Unmodified 915.46616 0.46616048 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 27.133 27.418 2 0.020339 29484 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 62.88 8.9124 75934000 0 0 0 0 0 0 11646000 9454500 0 14157000 0 21192000 10464000 9021500 0 417 2501 381 3484;3485;3486;3487;3488;3489 2876;2877;2878 2877 3 AALEEVERLK Unmodified 1156.6452 0.64518747 2501 Q15149 PLEC Plectin yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.18 3.74 3 1 7 1 1 2 1 1 1 1 1 1 1 51.521 49.699 2;3 0.0056823 54981 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.347 23.472 117280000 7315900 10561000 34563000 10373000 6116200 0 7019200 6542600 0 0 0 10223000 11877000 0 12687000 418 2501 382 3490;3491;3492;3493;3494;3495;3496;3497;3498;3499;3500 2879;2880;2881;2882;2883 2883 2 AALEEVYPDLTPEETRR Unmodified 1987.9851 0.9850848 4323 Q9H0D6 XRN2 5'-3' exoribonuclease 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.806 70.878 3 2.8706E-14 80732 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.347 84.754 325100000 0 0 0 14533000 13438000 27064000 16778000 24378000 19428000 25709000 30765000 37467000 29782000 29386000 56368000 419 4323 383 3501;3502;3503;3504;3505;3506;3507;3508;3509;3510;3511;3512 2884;2885;2886;2887;2888;2889;2890;2891;2892;2893;2894;2895;2896 2887 12 AALEEWLPR Unmodified 1083.5713 0.57129425 1988 P78549 NTHL1 Endonuclease III-like protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching 10 0 4 1 1 1 1 78.306 78.459 2 0.036919 90686 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 45.489 35.46 8832800 0 0 0 0 0 2414300 0 1674600 2064700 0 0 0 0 0 2679200 420 1988 384 3513;3514;3515;3516 2897 2897 1 AALEQLLK Unmodified 884.53312 0.53311783 3663 Q92797 SYMPK Symplekin yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67.157 66.416 2 0.010604 75885 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 79.116 20.135 188800000 11195000 0 14487000 8844500 9933800 14005000 11755000 12923000 9135700 14279000 14866000 15661000 13889000 16228000 21601000 421 3663 385 3517;3518;3519;3520;3521;3522;3523;3524;3525;3526;3527;3528;3529;3530 2898;2899;2900;2901;2902;2903;2904;2905;2906;2907;2908;2909;2910 2907 13 AALEQREQDAVDQVK Unmodified 1698.8537 0.8536767 2370 Q14134 TRIM29 Tripartite motif-containing protein 29 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching 10 0 7 1 1 1 1 1 1 1 39.292 39.694 2 0.00184 44057 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 75.819 35.323 37501000 0 0 0 0 0 0 4390200 6212100 0 0 4977600 7213800 4225200 2722900 7758900 422 2370 386 3531;3532;3533;3534;3535;3536;3537 2911 2911 1 AALEQRGLAK Unmodified 1055.6087 0.60874239 4976 Q9UKV3 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 23.211 19.29 2 7.1468E-05 27385 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 134.26 75.834 55728000 53504000 0 2223600 0 0 0 0 0 0 0 0 0 0 0 0 423 4976 387 3538;3539 2912 2912 1 AALETDENLLLCAPTGAGK Unmodified 1942.967 0.9669919 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 80.262 79.964 2 2.798E-53 92195 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 148.72 131.78 79507000 0 17849000 0 0 3824400 2689000 1905500 4688800 1752000 8558700 6940300 6011700 3872300 9074500 12341000 424 528 388 3540;3541;3542;3543;3544;3545;3546;3547;3548;3549;3550;3551 2913;2914;2915;2916;2917;2918;2919;2920;2921;2922;2923 2917 11 AALFLQTLK Unmodified 1003.6066 0.60661712 2200 Q12872 SFSWAP Splicing factor, suppressor of white-apricot homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.871 77.955 2 0.0036824 89412 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.741 72.812 94751000 0 0 0 8817200 0 4306500 7616000 8283600 6972300 9382000 12125000 0 8585000 9659200 19005000 425 2200 389 3552;3553;3554;3555;3556;3557;3558;3559;3560;3561;3562;3563 2924;2925;2926;2927;2928;2929;2930;2931;2932;2933;2934 2927 11 AALGAVPISGK Unmodified 982.58113 0.58113065 1462 P42684 ABL2 Abelson tyrosine-protein kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.561 49.719 2 0.0028186 56044 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 65.933 42.504 302000000 0 0 0 15699000 23038000 20911000 23755000 20886000 27009000 22704000 32527000 29124000 21725000 26412000 38212000 426 1462 390 3564;3565;3566;3567;3568;3569;3570;3571;3572;3573;3574;3575 2935;2936;2937;2938;2939;2940;2941;2942;2943;2944;2945;2946;2947;2948;2949;2950;2951 2942 17 AALGEPVRLER Acetyl (Protein N-term) 1251.6935 0.69353465 4651 Q9NUP9 LIN7C Protein lin-7 homolog C yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 66.465 66.592 2 0.00057479 76429 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 81.548 51.738 159210000 0 0 0 0 10061000 14114000 13996000 14635000 8880100 16661000 21128000 0 13247000 15856000 30629000 427 4651 391 3576;3577;3578;3579;3580;3581;3582;3583;3584;3585 2952;2953;2954;2955;2956;2957;2958 2957 7 AALGPSSQNVTEYVVR Acetyl (Protein N-term) 1731.8792 0.87916317 1351 P35269 GTF2F1 General transcription factor IIF subunit 1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 2 2 2 1 82.299 82.354 2;3 1.0894E-29 94899 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 179.19 163.66 594310000 0 0 0 25917000 43761000 41956000 47670000 41876000 44132000 61623000 74973000 68475000 37549000 48199000 58179000 428 1351 392 3586;3587;3588;3589;3590;3591;3592;3593;3594;3595;3596;3597;3598;3599;3600;3601;3602;3603;3604;3605;3606;3607;3608 2959;2960;2961;2962;2963;2964;2965;2966;2967;2968;2969;2970;2971;2972;2973;2974;2975;2976;2977;2978;2979;2980 2965 13 AALGPSSQNVTEYVVRVPK Acetyl (Protein N-term) 2056.0953 0.095303954 1351 P35269 GTF2F1 General transcription factor IIF subunit 1 yes yes 1 0 1 By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.24 2 1 10 3 1 1 1 1 1 1 2 2 84.26 83.364 2;3 3.8962E-24 96414 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.35 84.411 147960000 0 63641000 0 0 2515900 2204800 3422500 3586300 11305000 0 20505000 16837000 0 0 23942000 429 1351 393 3609;3610;3611;3612;3613;3614;3615;3616;3617;3618;3619;3620;3621 2981;2982;2983;2984;2985;2986;2987;2988 2982 8 AALGVAEAVAAPHPAEGAETAEAVELSR Acetyl (Protein N-term) 2728.3668 0.36678737 3204 Q86Y56 DNAAF5 Dynein assembly factor 5, axonemal yes yes 1 0 0 By MS/MS By MS/MS 10 0 2 1 1 88.399 88.529 3 8.5834E-37 102623 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 89.829 83.031 10322000 0 0 0 0 0 0 0 0 0 6842700 0 0 0 0 3479400 430 3204 394 3622;3623 2989;2990 2989 2 AALGVLESDLPSAVTLLK Acetyl (Protein N-term) 1838.0401 0.040080486 3425 Q8NEJ9 NGDN Neuroguidin yes yes 1 0 0 By MS/MS 2 0 1 1 103.35 98.617 2 4.4731E-09 121829 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.671 91.992 7679800 0 7679800 0 0 0 0 0 0 0 0 0 0 0 0 0 431 3425 395 3624 2991 2991 1 AALGVQSINWQTAFNR Acetyl (Protein N-term) 1816.922 0.92203104 2150 Q08188 TGM3 Protein-glutamine gamma-glutamyltransferase E;Protein-glutamine gamma-glutamyltransferase E 50 kDa catalytic chain;Protein-glutamine gamma-glutamyltransferase E 27 kDa non-catalytic chain yes yes 1 0 0 By MS/MS 10 0 1 1 95.014 95.133 2 0.001043 110580 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 58.676 44.419 1365300 0 0 0 0 0 0 0 0 0 1365300 0 0 0 0 0 432 2150 396 3625 2992 2992 1 AALHTTPDSPAAQLER Acetyl (Protein N-term) 1718.8588 0.85876208 27 A6NFI3 ZNF316 Zinc finger protein 316 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 62.798 62.935 2 2.2271E-06 72296 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 100.55 83.118 83793000 0 0 0 0 8109800 9876900 5840800 4234800 3313400 11734000 12307000 0 9770300 7820900 10785000 433 27 397 3626;3627;3628;3629;3630;3631;3632;3633;3634;3635;3636 2993;2994;2995;2996;2997;2998;2999;3000;3001;3002;3003;3004 3002 11 AALLAQYADVTDEEDEADEK Unmodified 2194.9754 0.97536756 3927 Q96MW1 CCDC43 Coiled-coil domain-containing protein 43 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 6.57 3.96 3 4 1 1 1 1 1 1 1 77.19 75.077 2 4.1209E-199 92997 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 238.88 224.67 179030000 25926000 127270000 2498100 0 0 0 0 0 0 3934300 0 5686900 0 3999200 9721700 434 3927 398 3637;3638;3639;3640;3641;3642;3643 3005;3006;3007;3008;3009;3010 3006 6 AALLDQIREGAQLK Unmodified 1524.8624 0.86239089 147 O00401 WASL Neural Wiskott-Aldrich syndrome protein yes yes 0 0 1 By MS/MS 2 0 1 1 80.828 72.697 3 0.011962 95426 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 37.156 18.327 10422000 10422000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 435 147 399 3644 3011 3011 1 AALLEAGMPECTEDK Unmodified 1633.7328 0.73275821 4287 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 62.408 62.53 2 0.0013853 70695 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.64 56.42 21440000 0 0 0 0 1484800 3416700 2460900 0 0 2894600 3012600 0 0 2455300 5715300 436 4287 400 3645;3646;3647;3648;3649;3650;3651 3012;3013;3014 3014 3 AALLEFEERER Unmodified 1361.6939 0.69392858 3823 Q96EV2 RBM33 RNA-binding protein 33 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 57.964 58.158 3 0.0017861 66341 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 54.259 25.453 125240000 0 0 0 0 4448600 19497000 8719000 6979700 10243000 0 8232200 18204000 11289000 7658100 29969000 437 3823 401 3652;3653;3654;3655;3656;3657;3658;3659;3660;3661 3015;3016;3017;3018 3015 4 AALLNFDEFAVSK Unmodified 1423.7347 0.73473076 5260 Q9Y613 FHOD1 FH1/FH2 domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 88.582 87.414 2 0.00057126 101324 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.258 82.106 88337000 7128400 39051000 2491200 0 1666600 3663900 2357400 3583600 3765700 5243700 4389100 4380100 1687000 2282900 6646600 438 5260 402 3662;3663;3664;3665;3666;3667;3668;3669;3670;3671;3672;3673;3674;3675;3676 3019;3020;3021;3022;3023;3024;3025;3026 3022 8 AALLNQHYQVNFK Unmodified 1544.81 0.80996139 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.04 2.6 3 22 1 1 1 1 2 2 2 2 2 2 2 2 3 2 66.5 65.975 2;3 9.2704E-20 73363 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 155.07 136.8 866650000 184950000 27218000 7586300 0 14174000 61295000 32013000 38753000 35999000 48663000 61415000 81006000 38672000 65785000 169120000 439 848 403 3677;3678;3679;3680;3681;3682;3683;3684;3685;3686;3687;3688;3689;3690;3691;3692;3693;3694;3695;3696;3697;3698;3699;3700;3701 3027;3028;3029;3030;3031;3032;3033;3034;3035;3036;3037;3038;3039;3040;3041;3042;3043;3044;3045;3046 3040 12 AALLQLLAQHQPQDDPK Unmodified 1885.0058 0.005760665 2360 Q14004 CDK13 Cyclin-dependent kinase 13 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 80.557 80.755 3 0.023257 93083 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 28.032 22.714 9172200 0 0 0 0 0 0 0 0 1809400 0 0 0 0 0 7362700 440 2360 404 3702;3703 3047 3047 1 AALLRPSFIPQEVK Unmodified 1567.9086 0.9086128 900 P0C7T5 ATXN1L Ataxin-1-like yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 76.353 76.436 3 0.0034568 88114 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 40.278 34.373 69313000 0 0 0 3293800 0 5384500 4180000 5726500 8803300 7442400 6425700 0 7068400 5679100 15309000 441 900 405 3704;3705;3706;3707;3708;3709;3710;3711;3712;3713 3048;3049;3050;3051 3051 4 AALLSGPPGVGK Unmodified 1065.6182 0.61824444 1349 P35251 RFC1 Replication factor C subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.203 56.328 2 0.016774 63693 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 42.348 30.627 98355000 0 0 0 6584200 6011100 6321900 9623200 8047500 6895800 9060600 10302000 9197400 6894600 7892000 11524000 442 1349 406 3714;3715;3716;3717;3718;3719;3720;3721;3722;3723;3724;3725 3052 3052 1 AALMDASQLEPGEK Unmodified 1458.7024 0.70244436 3713 Q969F9 HPS3 Hermansky-Pudlak syndrome 3 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 60.423 60.351 2 0.0017479 68724 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 55.401 39.521 14185000 0 0 0 0 6569900 0 0 0 0 0 7615200 0 0 0 0 443 3713 407 3726;3727;3728;3729;3730 3053;3054;3055;3056;3057 3055 5 AALMESQGQQQEER Unmodified 1603.726 0.72603334 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 25.081 25.26 2 7.5672E-14 25686 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 138.25 112.13 33429000 0 0 0 2630300 2541300 0 3975500 0 2342500 4500600 0 4272900 0 5376200 7789400 444 2459 408 3731;3732;3733;3734;3735;3736;3737;3738;3739;3740 3058;3059;3060;3061;3062;3063;3064;3065;3066;3067;3068 3060 11 AALMESQGQQQEER Oxidation (M) 1619.7209 0.72094797 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 15.416 15.494 2 0.0021522 15235 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 48.64 34.734 13985000 0 0 0 1322900 1034000 0 1772200 1105500 1072300 1635500 0 0 3143900 2898600 0 445 2459 408 3741;3742;3743;3744;3745;3746;3747;3748;3749 3069;3070 3070 4047 2 AALMESQGQQQEERGQQER Unmodified 2202.0084 0.008356215 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 23.888 24.028 3 1.0618E-05 24418 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.864 47.677 16149000 0 0 0 0 2169000 1639000 2137000 2072500 1621300 0 0 4207500 0 2302900 0 446 2459 409 3750;3751;3752;3753;3754;3755;3756;3757 3071;3072;3073;3074;3075 3072 5 AALMFANAEEEFFYEK Unmodified 1908.8604 0.86040156 4810 Q9P287 BCCIP BRCA2 and CDKN1A-interacting protein yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 95.248 89.429 2 2.6403E-31 113732 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 165.58 155.63 84868000 84868000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 447 4810 410 3758;3759 3076;3077 3077 2 AALMFANAEEEFFYEK Oxidation (M) 1924.8553 0.85531618 4810 Q9P287 BCCIP BRCA2 and CDKN1A-interacting protein yes yes 0 1 0 By MS/MS 2 0 1 1 92.102 83.972 2 0.00059628 108860 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.617 70.417 21475000 21475000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 448 4810 410 3760 3078 3078 6171 1 AALMTPGTGAPPAPGDFSGEGSQGLPDPSPEPK Acetyl (Protein N-term);Oxidation (M) 3190.4765 0.47647375 1097 P19971 TYMP Thymidine phosphorylase yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 5.5 4.5 2 2 1 1 1 1 96.377 98.476 3;4 1.0889E-25 98228 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 53.615 51.251 15751000 4547800 3910300 0 0 0 0 0 0 0 0 0 7293200 0 0 0 449 1097 411 3761;3762;3763;3764 3079;3080;3081;3082 3082 1572 4 AALMTPGTGAPPAPGDFSGEGSQGLPDPSPEPK Acetyl (Protein N-term) 3174.4816 0.48155913 1097 P19971 TYMP Thymidine phosphorylase yes yes 1 0 0 By MS/MS 10 0 1 1 89.155 89.298 3 1.2798E-25 103347 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.968 48.188 4787900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4787900 450 1097 411 3765 3083 3083 1 AALNGADIYAGCCTLK Unmodified 1696.7913 0.79127614 3567 Q8WVV9 HNRNPLL Heterogeneous nuclear ribonucleoprotein L-like yes yes 0 0 0 By MS/MS 2 0 1 1 71.45 65.722 2 6.1717E-07 83375 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.87 87.301 44289000 0 44289000 0 0 0 0 0 0 0 0 0 0 0 0 0 451 3567 412 3766 3084;3085 3085 2 AALNLPEAASYDEVRGK Unmodified 1802.9163 0.91627696 671 O95602 POLR1A DNA-directed RNA polymerase I subunit RPA1 yes yes 0 0 1 By MS/MS By matching By MS/MS 10 0 3 1 1 1 67.026 66.898 3 0.0032673 76451 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 40.515 23.026 14118000 0 0 0 0 2929400 7102000 0 0 4086700 0 0 0 0 0 0 452 671 413 3767;3768;3769 3086;3087 3086 2 AALPDLTK Unmodified 827.47527 0.4752686 2254 Q13217 DNAJC3 DnaJ homolog subfamily C member 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48.553 47.999 2 0.01335 61341 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.798 33.041 257170000 0 140560000 4174900 5326300 6318100 5584300 8496700 8134700 6900600 9892800 13973000 7834300 9476600 9911300 20586000 453 2254 414 3770;3771;3772;3773;3774;3775;3776;3777;3778;3779;3780;3781;3782;3783 3088;3089;3090 3089 3 AALPLTTSDTK Unmodified 1116.6027 0.60265396 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 45.574 44.301 2 3.5837E-09 57226 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.98 118.45 908150000 30167000 540080000 4144600 15048000 17037000 36615000 21739000 16835000 16038000 34062000 27180000 36701000 27893000 34799000 49806000 454 3119 415 3784;3785;3786;3787;3788;3789;3790;3791;3792;3793;3794;3795;3796;3797;3798;3799 3091;3092;3093;3094;3095;3096;3097;3098;3099;3100;3101;3102 3094 10 AALPTPALSPEDK Unmodified 1308.6925 0.6925316 4386 Q9H3S7 PTPN23 Tyrosine-protein phosphatase non-receptor type 23 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.134 62.231 2 0.0070644 70839 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 46.796 34.2 63656000 0 0 0 3484100 3597900 4938500 4549600 5474700 3270800 5693800 6066100 6787700 7036300 6120100 6636400 455 4386 416 3800;3801;3802;3803;3804;3805;3806;3807;3808;3809;3810;3811 3103;3104;3105;3106;3107;3108 3107 6 AALQEEEQASK Unmodified 1202.5779 0.57789577 116 O00139 KIF2A Kinesin-like protein KIF2A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.82 15.991 2 2.9958E-05 14453 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 131.44 109.35 121890000 0 0 0 5962900 5939500 8947900 6554900 5255700 4068400 12802000 14720000 13835000 18363000 15166000 10273000 456 116 417 3812;3813;3814;3815;3816;3817;3818;3819;3820;3821;3822;3823 3109;3110;3111;3112;3113;3114;3115;3116;3117;3118;3119;3120;3121 3117 13 AALQEELQLCK Unmodified 1301.6649 0.66493664 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 63.033 63.199 2 1.1333E-05 71262 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 138.1 98.096 250450000 0 0 0 0 6815300 28288000 8376700 0 14831000 25702000 37982000 28260000 15308000 29040000 55847000 457 1565 418 3824;3825;3826;3827;3828;3829;3830;3831;3832;3833;3834 3122;3123;3124;3125;3126;3127;3128;3129;3130;3131;3132;3133;3134;3135;3136 3132 15 AALQEGHQFLCSIEA Unmodified 1672.7879 0.78790532 1632 P50583 NUDT2 Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical] yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.3 3.85 5 1 4 1 3 2 1 1 1 1 80.687 78.169 2;3 0.0018155 98910 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.652 57.641 776260000 13347000 645660000 84458000 0 0 0 0 0 0 0 5312200 5618400 0 5608500 16256000 458 1632 419 3835;3836;3837;3838;3839;3840;3841;3842;3843;3844 3137;3138;3139;3140;3141;3142;3143;3144;3145 3141 8 AALQELESEQGK Unmodified 1301.6463 0.64630969 672 O95613 PCNT Pericentrin yes yes 0 0 0 By MS/MS 2 0 1 1 48.691 43.043 2 0.0025801 56078 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.048 65.694 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 459 672 420 3845 3146 3146 1 AALQELLSK Unmodified 971.56515 0.56514624 1917 P62851 RPS25 40S ribosomal protein S25 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.439 67.521 2 2.1279E-05 76591 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 135.79 88.217 813460000 0 0 0 52206000 58745000 59699000 56603000 46755000 38889000 73535000 74131000 107370000 73581000 65615000 106330000 460 1917 421 3846;3847;3848;3849;3850;3851;3852;3853;3854;3855;3856;3857 3147;3148;3149;3150;3151;3152;3153;3154;3155;3156;3157;3158 3150 9 AALQLVVDPGDPR Unmodified 1349.7303 0.73031409 714 O96013 PAK4 Serine/threonine-protein kinase PAK 4 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 74.091 74.164 2 0.017784 85551 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 38.714 28.191 24508000 0 0 0 0 2199900 5308300 2019300 0 2389800 3522300 5821000 3246800 0 0 0 461 714 422 3858;3859;3860;3861;3862;3863;3864 3159 3159 1 AALQSQAEALRR Unmodified 1312.7211 0.72114638 3606 Q8WZA9 IRGQ Immunity-related GTPase family Q protein yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 2 33.831 33.991 3 0.035956 37297 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 20.427 4.2894 35849000 0 0 0 0 2115500 7380500 3674300 0 0 8669300 0 5965900 0 8043900 0 462 3606 423 3865;3866;3867;3868;3869;3870;3871 3160;3161 3160 2 AALQTAPESADDSPSQLSK Unmodified 1914.9171 0.91706482 340 O43524 FOXO3 Forkhead box protein O3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.43 46.597 2 1.3918E-46 52161 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 126.95 112.27 119920000 0 0 0 5259000 5447700 9641800 8487100 7237100 6983500 12357000 13323000 14951000 9652500 12258000 14327000 463 340 424 3872;3873;3874;3875;3876;3877;3878;3879;3880;3881;3882;3883 3162;3163;3164;3165;3166;3167;3168;3169;3170;3171;3172;3173;3174 3167 13 AALRQITDK Unmodified 1014.5822 0.58219329 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 24.746 20.677 2 0.025899 28880 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 169.21 102.53 238400000 227020000 0 11376000 0 0 0 0 0 0 0 0 0 0 0 0 464 516 425 3884;3885 3175 3175 0 AALRQPQVAELLAEAR Acetyl (Protein N-term) 1776.9846 0.98463129 1658 P51570 GALK1 Galactokinase yes yes 1 0 1 By MS/MS 10 0 1 1 89.147 89.29 3 0.0014753 103281 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.618 36.334 10587000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10587000 465 1658 426 3886 3176 3176 1 AALSALESFLK Unmodified 1148.6441 0.64412484 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.09 3.85 4 7 1 2 1 1 1 1 1 1 1 1 92.71 90.96 2 1.487E-10 114229 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 152.28 118.02 556950000 205210000 292090000 3829300 0 0 1822000 0 1829400 0 6508600 2909900 2376900 0 3256000 37114000 466 1986 427 3887;3888;3889;3890;3891;3892;3893;3894;3895;3896;3897 3177;3178;3179;3180;3181;3182;3183;3184 3179 8 AALSEEELEK Unmodified 1117.5503 0.55028404 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 38.324 37.817 2 8.8913E-06 42340 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 147.51 122.59 6543200000 0 953470000 0 310140000 302130000 410670000 386460000 473650000 379420000 428600000 518140000 929020000 457550000 440160000 553830000 467 2102 428 3898;3899;3900;3901;3902;3903;3904;3905;3906;3907;3908;3909;3910;3911;3912;3913 3185;3186;3187;3188;3189;3190;3191;3192;3193;3194;3195;3196;3197;3198;3199;3200 3185 16 AALSEEELEKK Unmodified 1245.6452 0.64524705 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 20 1 2 2 2 2 2 2 2 2 1 2 30.61 30.839 2;3 0.00046725 32859 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 72.652 44.639 315080000 0 0 0 17951000 27284000 0 26873000 20778000 17743000 29019000 27540000 72248000 37535000 6508000 31601000 468 2102 429 3914;3915;3916;3917;3918;3919;3920;3921;3922;3923;3924;3925;3926;3927;3928;3929;3930;3931;3932;3933 3201;3202;3203;3204;3205;3206;3207;3208 3206 6 AALSEEELERK Unmodified 1273.6514 0.65139506 329 O43432 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.216 33.4 3 8.992E-05 35606 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 92.866 53.6 183490000 0 0 0 10613000 10965000 19462000 12706000 9837900 11012000 17936000 16553000 21578000 14227000 19333000 19269000 469 329 430 3934;3935;3936;3937;3938;3939;3940;3941;3942;3943;3944;3945 3209;3210;3211;3212;3213;3214;3215;3216;3217;3218;3219 3217 11 AALSLPAK Unmodified 769.46979 0.46978929 2458 Q14978 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.779 42.955 2 0.020609 47828 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 62.659 24.525 360720000 0 0 0 25679000 19758000 27272000 30023000 24179000 20766000 29742000 44381000 45045000 30580000 25906000 37393000 470 2458 431 3946;3947;3948;3949;3950;3951;3952;3953;3954;3955;3956;3957 3220;3221;3222;3223;3224;3225 3225 6 AALSSFQK Unmodified 850.45487 0.45486751 1838 P61201 COPS2 COP9 signalosome complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 31.017 29.975 2 0.015253 32546 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 69.176 30.339 1696900000 266700000 1081000000 9407800 19798000 15481000 27478000 23833000 15427000 15115000 28985000 38239000 42436000 29759000 27385000 55795000 471 1838 432 3958;3959;3960;3961;3962;3963;3964;3965;3966;3967;3968;3969;3970;3971;3972;3973 3226;3227;3228;3229;3230;3231;3232;3233 3232 2 AALTAEHFAALQSLLK Acetyl (Protein N-term) 1724.9461 0.94612052 4785 Q9P000 COMMD9 COMM domain-containing protein 9 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 98.942 94.715 2 1.4301E-91 118080 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 209.64 174.89 23469000 9720300 11640000 0 0 0 0 0 0 0 0 0 0 0 0 2109200 472 4785 433 3974;3975;3976 3234;3235;3236 3234 3 AALTRDPQFQK Acetyl (Protein N-term) 1315.6884 0.68844927 829 P06744 GPI Glucose-6-phosphate isomerase yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 54.055 52.642 2 2.1091E-10 64763 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 150.61 103.42 10945000000 685230000 8029800000 142710000 24446000 17534000 15072000 21552000 15612000 0 30958000 380560000 283210000 30256000 207270000 1060500000 473 829 434 3977;3978;3979;3980;3981;3982;3983;3984;3985;3986;3987;3988;3989;3990;3991 3237;3238;3239;3240;3241;3242;3243;3244;3245;3246;3247;3248;3249;3250;3251;3252 3243 14 AALTTLFK Acetyl (Protein N-term) 905.52222 0.52221879 3910 Q96KP4 CNDP2 Cytosolic non-specific dipeptidase yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.12 3.79 4 1 3 1 3 1 1 1 1 95.592 92.717 1;2 0.0028637 114378 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.21 72.906 802290000 12858000 765210000 1303500 0 0 0 0 0 0 0 5092500 0 0 4097900 13730000 474 3910 435 3992;3993;3994;3995;3996;3997;3998;3999 3253;3254;3255;3256;3257;3258 3253 5 AALVAQNYINYQQGTPHR Unmodified 2043.0286 0.028621372 4124 Q9BS40 LXN Latexin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 62.935 63.179 3 1.3554E-07 72069 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 79.805 63.862 141220000 0 0 0 0 0 22251000 5013100 7850400 0 10671000 19923000 13339000 5241200 10454000 46482000 475 4124 436 4000;4001;4002;4003;4004;4005;4006;4007;4008 3259;3260;3261;3262;3263;3264;3265;3266;3267;3268;3269;3270;3271 3259 13 AALVDLEPGTMDSVR Oxidation (M) 1588.7767 0.77667193 4160 Q9BUF5 TUBB6 Tubulin beta-6 chain yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.217 68.296 2 5.2058E-27 78615 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 129.82 111.76 1014900000 0 0 0 52798000 58590000 59567000 93148000 57922000 64130000 100760000 114510000 142290000 98255000 83888000 89080000 476 4160 437 4009;4010;4011;4012;4013;4014;4015;4016;4017;4018;4019;4020 3272;3273;3274;3275;3276;3277;3278;3279;3280;3281;3282;3283 3280 5643 11 AALVDLEPGTMDSVR Unmodified 1572.7818 0.78175731 4160 Q9BUF5 TUBB6 Tubulin beta-6 chain yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.494 77.552 2 7.8567E-19 89496 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 136.96 108 1068800000 0 0 0 42177000 49340000 65500000 50638000 89833000 43704000 86639000 129270000 125020000 82613000 106860000 197190000 477 4160 437 4021;4022;4023;4024;4025;4026;4027;4028;4029;4030;4031;4032 3284;3285;3286;3287;3288;3289;3290;3291;3292;3293 3285 9 AALVDYLDGK Unmodified 1063.555 0.55497548 2947 Q6PGP7 TTC37 Tetratricopeptide repeat protein 37 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 75.922 72.079 2 0.031373 90073 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.433 40.807 182740000 0 179600000 3141800 0 0 0 0 0 0 0 0 0 0 0 0 478 2947 438 4033;4034 3294 3294 1 AALVLEDGSVLR Acetyl (Protein N-term) 1283.7085 0.70851601 1224 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 93.436 93.512 2 1.4532E-08 108674 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 145.17 47.139 215470000 0 0 0 6244000 17098000 20205000 12197000 13579000 10189000 25860000 20123000 28728000 13977000 17116000 30152000 479 1224 439 4035;4036;4037;4038;4039;4040;4041;4042;4043;4044;4045;4046 3295;3296;3297;3298;3299;3300;3301;3302;3303;3304;3305;3306;3307;3308;3309;3310 3303 16 AALYFQR Unmodified 867.46029 0.46028724 4943 Q9UJX2 CDC23 Cell division cycle protein 23 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 45.845 46.082 2 0.02563 51982 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 80.377 43.79 181410000 0 0 0 0 10662000 17806000 13347000 13837000 9598600 17746000 14880000 19425000 18207000 15651000 30252000 480 4943 440 4047;4048;4049;4050;4051;4052;4053;4054;4055;4056;4057 3311;3312;3313;3314;3315;3316 3313 6 AAMAVGGAGGSR Acetyl (Protein N-term);Oxidation (M) 1061.4924 0.492392 208 O14744 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 13 1 1 1 2 2 1 1 2 1 1 25.245 25.38 2 0.00012058 27475 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 72.643 53.166 123160000 0 0 0 14367000 7694200 10225000 18542000 20380000 5748400 9724800 13883000 10941000 11651000 0 0 481 208 441 4058;4059;4060;4061;4062;4063;4064;4065;4066;4067;4068;4069;4070 3317;3318;3319;3320;3321;3322;3323;3324;3325;3326 3326 277 4 AAMAVGGAGGSR Acetyl (Protein N-term) 1045.4975 0.49747738 208 O14744 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed yes yes 1 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 41.203 41.367 2 0.00030123 46008 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 72.434 62.963 156960000 0 0 0 9172300 10281000 0 12525000 10472000 6147200 16674000 0 21056000 14201000 17469000 38964000 482 208 441 4071;4072;4073;4074;4075;4076;4077;4078;4079;4080 3327;3328;3329;3330;3331;3332;3333;3334;3335;3336 3329 10 AAMDSARLSAAK Unmodified 1190.6078 0.60775611 2828 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog yes yes 0 0 1 By MS/MS By matching By MS/MS 2 0 5 2 1 2 28.746 24.406 2;3 0.0028616 34063 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 92.866 61.106 319300000 275840000 13758000 29707000 0 0 0 0 0 0 0 0 0 0 0 0 483 2828 442 4081;4082;4083;4084;4085 3337;3338 3337 2 AAMEPIVISAK Oxidation (M) 1144.6162 0.61619553 5187 Q9Y490 TLN1 Talin-1 yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 48.635 48.694 2 0.0003673 54833 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 81.338 64.88 65587000 0 0 0 0 0 41361000 24227000 0 0 0 0 0 0 0 0 484 5187 443 4086;4087 3339;3340 3340 6555 2 AAMIVNQLSK Oxidation (M) 1089.5852 0.58522975 1010 P14923 JUP Junction plakoglobin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 2 2 2 2 2 2 38.354 38.544 2 0.00034401 43864 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 126.41 102.98 527850000 0 0 0 172800000 28123000 26821000 0 114650000 19359000 29275000 30734000 33681000 40149000 13341000 18914000 485 1010 444 4088;4089;4090;4091;4092;4093;4094;4095;4096;4097;4098;4099;4100;4101;4102;4103;4104;4105;4106;4107;4108;4109 3341;3342;3343;3344;3345;3346;3347;3348;3349;3350;3351;3352;3353;3354;3355;3356;3357;3358 3356 1389 17 AAMIVNQLSK Unmodified 1073.5903 0.59031513 1010 P14923 JUP Junction plakoglobin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 52.052 51.316 2 0.0021243 57831 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 86.205 61.354 444720000 25081000 0 0 117600000 20237000 25639000 0 92704000 0 31807000 36325000 48441000 42856000 4027500 0 486 1010 444 4110;4111;4112;4113;4114;4115;4116;4117;4118;4119 3359;3360;3361;3362;3363;3364;3365 3362 6 AAMIVNQLSKK Unmodified 1201.6853 0.68527815 1010 P14923 JUP Junction plakoglobin yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 40.857 41.098 3 0.041739 45946 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 21.759 2.4436 47855000 0 0 0 9257300 0 0 3454800 18762000 0 0 0 13545000 0 0 2837300 487 1010 445 4120;4121;4122;4123;4124 3366 3366 1 AAMIVNQLSKK Oxidation (M) 1217.6802 0.68019277 1010 P14923 JUP Junction plakoglobin yes yes 0 1 1 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 30.365 30.496 3 0.02408 33066 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 48.44 6.9001 30671000 0 0 0 6544300 0 1393700 0 16481000 0 0 0 6252000 0 0 0 488 1010 445 4125;4126;4127;4128 3367 3367 1389 0 AAMRETWLSENQR Unmodified 1590.7573 0.75727389 2047;241 Q01082;P11277;O15020 SPTBN1;SPTB;SPTBN2 Spectrin beta chain, non-erythrocytic 1;Spectrin beta chain, erythrocytic;Spectrin beta chain, non-erythrocytic 2 no no 0 0 1 By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 45.541 45.933 3 0.010771 50484 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.82 30.02 33437000 0 0 0 0 0 5184100 0 0 0 4352900 5799900 3976100 4111200 2880000 7132800 489 2047;241 446 4129;4130;4131;4132;4133;4134;4135 3368 3368 1 AAMYDIISSPSK Unmodified 1281.6275 0.6274885 2891 Q6KC79 NIPBL Nipped-B-like protein yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 65.62 65.569 2 0.048848 74205 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 42.336 28.218 7528600 0 0 0 0 2412800 0 0 0 1689300 0 0 0 0 3426400 0 490 2891 447 4136;4137;4138 3369 3369 1 AANAAENDFSVSQAEMSSR Unmodified 1983.8592 0.85923236 3421 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 2 20 2 1 1 2 2 1 2 2 2 2 2 1 2 57.181 57.107 2;3 5.6367E-96 71159 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 192.39 184.64 221950000 0 32081000 0 0 8491300 18515000 12336000 10590000 15072000 15537000 31086000 20295000 12073000 10687000 35193000 491 3421 448 4139;4140;4141;4142;4143;4144;4145;4146;4147;4148;4149;4150;4151;4152;4153;4154;4155;4156;4157;4158;4159;4160 3370;3371;3372;3373;3374;3375;3376;3377;3378;3379;3380;3381;3382;3383;3384 3374 14 AANAAENDFSVSQAEMSSR Oxidation (M) 1999.8541 0.85414698 3421 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 yes yes 0 1 0 By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.751 47.913 2 2.5517E-47 53580 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 130.24 127.92 85912000 0 0 0 3461400 4538200 5564200 8799200 5497800 5547300 9618900 7637200 9852800 9634900 7040500 8719500 492 3421 448 4161;4162;4163;4164;4165;4166;4167;4168;4169;4170;4171;4172 3385;3386;3387;3388;3389;3390;3391 3391 4964 7 AANAAENDFSVSQAEMSSRQAMLENASDIK Unmodified 3184.4401 0.44010502 3421 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 82.169 78.189 3;4 6.5655E-134 97147 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 151.41 145.87 125210000 0 119080000 6136900 0 0 0 0 0 0 0 0 0 0 0 0 493 3421 449 4173;4174;4175 3392;3393;3394 3392 3 AANATTNPSQLLPLELVDK Acetyl (Protein N-term) 2036.079 0.078985188 5213 Q9Y4Y9 LSM5 U6 snRNA-associated Sm-like protein LSm5 yes yes 1 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.65 3.16 3 1 22 2 2 1 2 2 1 2 2 2 2 2 2 2 2 97.882 98.215 2;3 3.9154E-65 91778 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 210.34 202.23 631350000 229420000 120820000 0 741440 10156000 5185100 6619400 12663000 6414600 23728000 37646000 36476000 10187000 25755000 105550000 494 5213 450 4176;4177;4178;4179;4180;4181;4182;4183;4184;4185;4186;4187;4188;4189;4190;4191;4192;4193;4194;4195;4196;4197;4198;4199;4200;4201 3395;3396;3397;3398;3399;3400;3401;3402;3403;3404;3405;3406;3407;3408;3409;3410 3402 15 AANDAGYFNDEMAPIEVK Oxidation (M) 1969.8728 0.87275716 1465 P42765 ACAA2 3-ketoacyl-CoA thiolase, mitochondrial yes yes 0 1 0 By MS/MS 2 0 1 1 74.929 69.866 2 3.3654E-14 87567 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 111.95 102.44 41324000 0 41324000 0 0 0 0 0 0 0 0 0 0 0 0 0 495 1465 451 4202 3411 3411 2302 1 AANDAGYFNDEMAPIEVK Unmodified 1953.8778 0.87784254 1465 P42765 ACAA2 3-ketoacyl-CoA thiolase, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 82.215 77.51 2 3.7894E-73 96376 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 220.85 214.88 203240000 0 203240000 0 0 0 0 0 0 0 0 0 0 0 0 0 496 1465 451 4203 3412 3412 1 AANGVVLATEK Unmodified 1071.5924 0.59242362 1194 P25787 PSMA2 Proteasome subunit alpha type-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.22 3.94 2 4 12 3 2 1 1 1 1 1 1 1 1 1 1 1 1 1 42.353 41.631 2 5.0813E-09 102758 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 128.27 39.127 2186800000 118740000 1644800000 12224000 30972000 7440800 9580900 9181400 16880000 5143700 17748000 69140000 66579000 15399000 31110000 131880000 497 1194 452 4204;4205;4206;4207;4208;4209;4210;4211;4212;4213;4214;4215;4216;4217;4218;4219;4220;4221 3413;3414;3415;3416;3417;3418;3419;3420;3421;3422;3423;3424;3425;3426 3423 13 AANLEMFK Oxidation (M) 938.45315 0.45315295 3594 Q8WXI9 GATAD2B Transcriptional repressor p66-beta yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.21 2.31 1 1 17 2 1 1 1 2 2 2 1 1 2 1 1 2 38.837 38.382 2 0.011631 42155 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 65.313 31.5 128370000 0 29588000 0 4009800 7441800 6416200 10834000 6277500 11134000 8759000 0 21812000 8726300 5470600 7902700 498 3594 453 4222;4223;4224;4225;4226;4227;4228;4229;4230;4231;4232;4233;4234;4235;4236;4237;4238;4239;4240 3427;3428;3429;3430;3431;3432;3433;3434;3435;3436 3434 5089 10 AANLEMFK Unmodified 922.45824 0.45823833 3594 Q8WXI9 GATAD2B Transcriptional repressor p66-beta yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56.057 55.16 2 0.010495 61492 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 79.469 48.41 245750000 3986200 87999000 0 6987400 7910000 10814000 7868400 10327000 8606600 14592000 12949000 13857000 13238000 15486000 31129000 499 3594 453 4241;4242;4243;4244;4245;4246;4247;4248;4249;4250;4251;4252;4253;4254 3437;3438;3439;3440 3440 4 AANMIPAHDSPLAALAFDASGTK Oxidation (M) 2284.1158 0.1157814 5208 Q9Y4P8 WIPI2 WD repeat domain phosphoinositide-interacting protein 2 yes yes 0 1 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 83.036 83.11 3 1.0244E-10 95950 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.877 62.62 49776000 0 0 0 0 3424100 6770600 1885600 5516300 0 11267000 0 0 0 0 20912000 500 5208 454 4255;4256;4257;4258;4259;4260 3441 3441 6610 1 AANMLQQSGSK Oxidation (M) 1149.5448 0.5448215 1496 P46063 RECQL ATP-dependent DNA helicase Q1 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 8.21 3.43 1 2 11 1 1 1 1 1 1 1 2 2 1 1 1 14.57 14.717 2 2.6335E-05 7702 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.52 98.609 102740000 16468000 23558000 1553900 0 0 0 3939700 2935900 2913500 4450500 21163000 10373000 3173800 4584100 7629800 501 1496 455 4261;4262;4263;4264;4265;4266;4267;4268;4269;4270;4271;4272;4273;4274 3442;3443;3444;3445;3446;3447;3448;3449 3443 2358 5 AANMLQQSGSK Unmodified 1133.5499 0.54990688 1496 P46063 RECQL ATP-dependent DNA helicase Q1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 5.4 3.77 2 1 2 1 2 1 1 20.912 18.495 2 0.0010718 24039 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.665 78.679 398090000 0 379530000 0 0 0 0 0 0 0 0 18562000 0 0 0 0 502 1496 455 4275;4276;4277;4278;4279 3450;3451;3452;3453;3454 3451 4 AANNIASLLTK Unmodified 1114.6346 0.63462279 4176 Q9BV44 THUMPD3 THUMP domain-containing protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.08 72.151 2 0.0001676 82855 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 108.43 85.362 105540000 0 0 0 6670300 5263100 8804100 5977000 8357500 5516800 8624100 11651000 10694000 6367900 8952200 18662000 503 4176 456 4280;4281;4282;4283;4284;4285;4286;4287;4288;4289;4290;4291 3455;3456;3457;3458;3459;3460;3461;3462;3463;3464;3465;3466 3456 12 AANPGCSLEDFVR Unmodified 1434.6562 0.65616287 2484 Q15042 RAB3GAP1 Rab3 GTPase-activating protein catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 74.157 73.853 2 4.3356E-08 85043 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 104.52 85.208 104360000 0 27087000 0 4518500 3027500 6341300 5137300 4295200 4070800 4484800 8000600 9696400 8205100 7650600 11846000 504 2484 457 4292;4293;4294;4295;4296;4297;4298;4299;4300;4301;4302;4303;4304 3467;3468;3469;3470;3471;3472;3473;3474;3475;3476;3477;3478 3476 12 AANPVDFLSK Unmodified 1060.5553 0.55530983 3277 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.975 70.052 2 0.0023779 80356 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 84.213 57.251 92869000 0 0 0 4771800 5221100 9368300 7897000 7451300 4980700 9049800 8933200 12468000 6925200 7860200 7942800 505 3277 458 4305;4306;4307;4308;4309;4310;4311;4312;4313;4314;4315;4316 3479;3480;3481;3482;3483;3484;3485;3486;3487;3488;3489;3490 3481 12 AANRDLATPVMQPCTALDSHK Unmodified 2295.11 0.10998452 4652 Q9NUQ3 TXLNG Gamma-taxilin yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 6.57 3.96 3 4 2 1 1 1 1 1 62.064 59.351 3;4 0.00010729 80359 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.971 42.094 163730000 129490000 0 10489000 0 0 0 0 2187300 0 0 4349300 0 0 4863300 12351000 506 4652 459 4317;4318;4319;4320;4321;4322;4323 3491;3492;3493;3494;3495 3492 5 AANRDLATPVMQPCTALDSHK Oxidation (M) 2311.1049 0.10489914 4652 Q9NUQ3 TXLNG Gamma-taxilin yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 54.338 48.303 4 3.9978E-07 60902 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 58.914 50.555 75839000 59131000 0 16708000 0 0 0 0 0 0 0 0 0 0 0 0 507 4652 459 4324;4325 3496 3496 6060 0 AANSCTSYSGTTLNLK Unmodified 1686.7883 0.78829925 5054 Q9UPQ0 LIMCH1 LIM and calponin homology domains-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 51.992 50.389 2 8.6614E-31 64333 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 158.04 143.81 80438000 0 40004000 0 0 0 0 0 0 0 0 0 0 14942000 0 25491000 508 5054 460 4326;4327;4328;4329;4330;4331;4332;4333 3497;3498;3499;3500;3501;3502;3503;3504;3505 3498 9 AANSLEAFIFETQDK Unmodified 1682.8152 0.81516593 5206 Q9Y4L1 HYOU1 Hypoxia up-regulated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.12 3.72 4 2 10 4 2 2 2 2 2 2 90.064 88.827 2;3 1.0967E-58 110696 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 229.95 203.28 346490000 0 280600000 12609000 0 0 0 0 0 0 9158700 6242500 7968400 0 4436500 25471000 509 5206 461 4334;4335;4336;4337;4338;4339;4340;4341;4342;4343;4344;4345;4346;4347;4348;4349 3506;3507;3508;3509;3510;3511;3512;3513;3514;3515;3516 3509 10 AANSSGQGFQNK Acetyl (Protein N-term) 1249.5687 0.56872807 4614 Q9NRY2 INIP SOSS complex subunit C yes yes 1 0 0 By MS/MS 1 0 1 1 85.961 91.225 2 0.0010125 68918 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 77.677 65.83 3284000 3284000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 510 4614 462 4350 3517 3517 1 AANVFPFR Acetyl (Protein N-term) 962.4974 0.49740102 4472 Q9H9F9 ACTR5 Actin-related protein 5 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 86.203 86.286 2 0.0073909 100197 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.788 49.915 15688000 0 0 0 0 1014800 0 0 1586500 0 2549200 3372500 4259100 2906000 0 0 511 4472 463 4351;4352;4353;4354;4355;4356 3518;3519 3519 2 AANVGSMFQYWK Acetyl (Protein N-term) 1442.6653 0.66527099 2357 Q13948 CUX1 Protein CASP no no 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 94.767 93.917 2 0.0067098 114217 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 50.978 38.401 18212000 0 13430000 0 0 0 0 0 0 0 1216600 671490 0 0 531250 2362700 512 2357 464 4357;4358;4359;4360;4361 3520;3521 3520 2 AANVLITR Unmodified 856.51305 0.51305109 1637 P50750 CDK9 Cyclin-dependent kinase 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.776 35.956 2 0.030437 39346 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 55.531 20.638 258990000 0 0 0 13286000 15227000 21000000 20155000 17946000 16493000 20803000 22752000 28294000 23481000 23452000 36103000 513 1637 465 4362;4363;4364;4365;4366;4367;4368;4369;4370;4371;4372;4373 3522;3523;3524 3524 3 AANVLITRDGVLK Unmodified 1368.8089 0.80889876 1637 P50750 CDK9 Cyclin-dependent kinase 9 yes yes 0 0 1 By MS/MS 2 0 2 2 69.151 60.856 2;3 0.012906 81370 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.507 45.203 34707000 34707000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 514 1637 466 4374;4375 3525;3526 3526 2 AANVLLSEHGEVK Unmodified 1365.7252 0.72522871 5279 Q9Y6E0 STK24 Serine/threonine-protein kinase 24;Serine/threonine-protein kinase 24 36 kDa subunit;Serine/threonine-protein kinase 24 12 kDa subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 6.45 3.93 8 1 11 2 4 3 1 1 1 1 1 1 1 1 1 1 1 44.681 42.348 2;3 4.8329E-13 53960 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 120.96 100.66 572670000 24804000 324550000 124960000 2623400 0 10485000 6895800 6736400 7081400 10933000 12302000 12481000 10053000 5445900 13325000 515 5279 467 4376;4377;4378;4379;4380;4381;4382;4383;4384;4385;4386;4387;4388;4389;4390;4391;4392;4393;4394;4395 3527;3528;3529;3530;3531;3532;3533;3534;3535;3536;3537;3538;3539;3540 3538 10 AANVLLSEQGDVK Unmodified 1342.7092 0.70924429 4811 Q9P289 STK26 Serine/threonine-protein kinase 26 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.06 3.96 1 5 2 8 2 5 1 1 1 1 1 1 1 1 1 56.862 54.602 2 1.7464E-13 65692 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.67 104.25 3755700000 16232000 3029100000 8238800 0 0 91608000 0 0 34814000 97391000 95831000 124400000 65308000 58953000 133770000 516 4811 468 4396;4397;4398;4399;4400;4401;4402;4403;4404;4405;4406;4407;4408;4409;4410;4411 3541;3542;3543;3544;3545;3546;3547;3548;3549;3550;3551;3552;3553;3554;3555;3556;3557;3558;3559 3545 18 AAPAEPDFIFRAPIK Unmodified 1641.8879 0.88787736 3411 Q8NCN4 RNF169 E3 ubiquitin-protein ligase RNF169 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.561 80.622 3 0.011402 92956 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 34.432 29.631 40157000 0 0 0 1409200 1232100 2632600 1995600 2310800 3290800 4785600 4255100 4809500 2407300 2253600 8774900 517 3411 469 4412;4413;4414;4415;4416;4417;4418;4419;4420;4421;4422;4423 3560 3560 1 AAPAERQIDLQR Unmodified 1366.7317 0.73171107 2647 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 37.441 33.265 3 0.0089025 41621 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 56.205 48.48 93124000 0 32411000 60713000 0 0 0 0 0 0 0 0 0 0 0 0 518 2647 470 4424;4425 3561;3562 3562 2 AAPAGGFQNIACLR Unmodified 1444.7245 0.7245172 4849 Q9UBP6 METTL1 tRNA (guanine-N(7)-)-methyltransferase yes yes 0 0 0 By MS/MS 10 0 1 1 72.483 72.639 2 0.018087 82777 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 50.108 31.796 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 519 4849 471 4426 3563 3563 1 AAPAPTASSTININTSTSK Unmodified 1830.9323 0.93232095 3203 Q86Y37 CACUL1 CDK2-associated and cullin domain-containing protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 49.94 50.65 2 2.1279E-06 56293 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.692 64.653 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 520 3203 472 4427 3564 3564 1 AAPAPVTR Acetyl (Protein N-term) 823.4552 0.45520186 3068 Q7RTV5 AAED1 Thioredoxin-like protein AAED1 yes yes 1 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 30.898 31.253 2 0.026783 33795 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 40.268 18.968 25915000 0 0 0 0 2262100 0 0 0 0 0 5123300 7218600 3786500 2938100 4586600 521 3068 473 4428;4429;4430;4431;4432;4433 3565 3565 1 AAPAQQTTQPGGGK Acetyl (Protein N-term) 1352.6684 0.66844211 4726 Q9NXG2 THUMPD1 THUMP domain-containing protein 1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 21.364 20.677 2 1.9813E-31 25065 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 148.32 135.28 144100000 17058000 13580000 0 0 0 10110000 0 0 0 10627000 19230000 20028000 9977100 15846000 27643000 522 4726 474 4434;4435;4436;4437;4438;4439;4440;4441;4442 3566;3567;3568;3569;3570;3571 3568 6 AAPAQVRPPSPGNIRPVK Unmodified 1854.0588 0.058799288 2398 Q14244 MAP7 Ensconsin yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.343 47.506 4 3.0284E-06 53418 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 71.781 67.683 310550000 0 0 0 17228000 15644000 31149000 24544000 21617000 21921000 33651000 26802000 29814000 26057000 19009000 43111000 523 2398 475 4443;4444;4445;4446;4447;4448;4449;4450;4451;4452;4453;4454 3572;3573;3574;3575;3576;3577;3578;3579;3580;3581 3572 5 AAPASSAGASDAR Unmodified 1130.5316 0.53161428 3438 Q8NF37 LPCAT1 Lysophosphatidylcholine acyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.4802 7.608 2 0.00026853 5951 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 82.417 70.37 48288000 0 0 0 2098100 2343700 2784800 2791400 3709800 3528800 4138300 9894200 5903400 3467100 4207400 3421200 524 3438 476 4455;4456;4457;4458;4459;4460;4461;4462;4463;4464;4465;4466 3582;3583;3584;3585;3586;3587;3588;3589;3590;3591;3592;3593 3590 12 AAPCEGQAFAVGVEK Acetyl (Protein N-term) 1574.7399 0.73989249 3182 Q86WB0 ZC3HC1 Nuclear-interacting partner of ALK yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.45 3.29 1 1 9 2 1 1 1 1 1 1 1 1 1 75.836 76.52 2 3.7313E-10 84064 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 117.2 99.336 122820000 8153000 0 0 0 0 16025000 10947000 7891500 0 14306000 12685000 15592000 11930000 10872000 14415000 525 3182 477 4467;4468;4469;4470;4471;4472;4473;4474;4475;4476;4477 3594;3595;3596;3597;3598;3599;3600;3601;3602;3603;3604 3600 11 AAPDEDREPESAR Unmodified 1441.6433 0.64334957 4067 Q99856 ARID3A AT-rich interactive domain-containing protein 3A yes yes 0 0 1 By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 11.16 11.302 3 0.0084196 10331 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 33.685 12.384 31696000 0 0 0 1560200 0 2565300 2797300 2501300 3021100 3820200 0 4500100 4023000 2685100 4222500 526 4067 478 4478;4479;4480;4481;4482;4483;4484;4485;4486;4487 3605;3606;3607;3608;3609 3608 2 AAPEASSPPASPLQHLLPGK Unmodified 1967.0476 0.04762548 4003 Q96TA1 FAM129B Niban-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 78.405 77.283 3 0.00015742 88226 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 49.655 40.074 775760000 256270000 95656000 40253000 9417200 10461000 43341000 25062000 18067000 16312000 43689000 34490000 40374000 31989000 35263000 75110000 527 4003 479 4488;4489;4490;4491;4492;4493;4494;4495;4496;4497;4498;4499;4500;4501;4502;4503 3610;3611;3612;3613;3614;3615;3616;3617;3618;3619;3620;3621;3622 3619 12 AAPEEHDSPTEASQPIVEEEETK Acetyl (Protein N-term) 2564.1402 0.14020105 4337 Q9H0S4 DDX47 Probable ATP-dependent RNA helicase DDX47 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 58.031 58.315 3 1.9171E-05 66646 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 44.863 37.417 33734000 0 0 0 0 0 0 0 6314200 0 11133000 0 0 8954500 0 7332000 528 4337 480 4504;4505;4506;4507 3623 3623 1 AAPEEPQQRPPEAVAAAPAGTTSSR Unmodified 2488.2306 0.23062824 3898 Q96JP5 ZFP91 E3 ubiquitin-protein ligase ZFP91 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.189 43.364 3 1.5514E-92 48640 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 140.55 133.45 1186000000 0 0 0 84612000 96555000 84087000 95641000 67503000 74551000 86919000 118000000 125580000 120830000 106140000 125610000 529 3898 481 4508;4509;4510;4511;4512;4513;4514;4515;4516;4517;4518;4519 3624;3625;3626;3627;3628;3629;3630;3631;3632;3633;3634;3635;3636;3637;3638;3639;3640;3641;3642 3637 19 AAPEERDLTQEQTEK Acetyl (Protein N-term) 1785.8381 0.83808621 3783 Q96CS3 FAF2 FAS-associated factor 2 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.877 41.055 2 3.1626E-28 44869 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 154.47 88.181 153610000 0 0 0 7400800 11685000 10005000 14108000 10796000 9988500 12338000 18205000 20343000 15934000 10451000 12357000 530 3783 482 4520;4521;4522;4523;4524;4525;4526;4527;4528;4529;4530;4531 3643;3644;3645;3646;3647;3648;3649;3650;3651;3652;3653;3654 3646 12 AAPEPQQPMELYQPSAESLRQQEERK Unmodified 3039.472 0.47199749 3757 Q96BH1 RNF25 E3 ubiquitin-protein ligase RNF25 yes yes 0 0 2 By MS/MS 2 0 1 1 69.459 65.778 4 0.00012341 81375 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 41.087 38.09 6465400 0 0 6465400 0 0 0 0 0 0 0 0 0 0 0 0 531 3757 483 4532 3655 3655 1 AAPFSLEYR Unmodified 1052.5291 0.52909508 2505 Q15181 PPA1 Inorganic pyrophosphatase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 65.975 66.053 2 0.01167 75314 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 62.464 44.086 408240000 0 0 0 8642200 5662400 6550100 10125000 9008900 4449200 13777000 63455000 53872000 0 54761000 177940000 532 2505 484 4533;4534;4535;4536;4537;4538;4539;4540;4541;4542;4543 3656;3657;3658 3658 2 AAPGAEFAPNK Unmodified 1071.5349 0.53490874 2508 Q15233 NONO Non-POU domain-containing octamer-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.382 33.566 2 0.00028424 36838 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 93.178 73.401 1611600000 0 0 0 75087000 65806000 106730000 118180000 81804000 80154000 162510000 193590000 212460000 124900000 150720000 239630000 533 2508 485 4544;4545;4546;4547;4548;4549;4550;4551;4552;4553;4554;4555 3659;3660;3661;3662;3663;3664;3665;3666;3667;3668;3669 3667 11 AAPGPALCLFDVDGTLTAPR Acetyl (Protein N-term) 2083.0408 0.040825542 272 O15305 PMM2 Phosphomannomutase 2 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 98.549 97.094 2 8.3504E-59 117217 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.9 120.65 36495000 0 31023000 0 0 0 0 0 0 0 0 1708800 0 0 0 3763300 534 272 486 4556;4557;4558 3670;3671;3672 3670 3 AAPGPALCLFDVDGTLTAPRQK Acetyl (Protein N-term) 2339.1944 0.19436607 272 O15305 PMM2 Phosphomannomutase 2 yes yes 1 0 1 By MS/MS 2.5 0.5 1 1 2 97.033 93.008 2;3 5.5847E-41 114969 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.48 110.37 28639000 0 28639000 0 0 0 0 0 0 0 0 0 0 0 0 0 535 272 487 4559;4560 3673;3674 3673 2 AAPGPGPSTFSFVPPSK Unmodified 1642.8355 0.83550744 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 77.597 77.394 2 2.3481E-05 89361 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 80.96 71.955 450220000 0 9556600 0 19337000 26231000 29479000 27734000 46441000 22959000 43328000 37206000 53213000 44007000 40297000 50429000 536 1364 488 4561;4562;4563;4564;4565;4566;4567;4568;4569;4570;4571;4572;4573 3675;3676;3677;3678;3679;3680;3681;3682;3683;3684;3685;3686;3687 3685 13 AAPLAAPPPAPAAPPAVAPPAGPR Unmodified 2124.1844 0.18439373 2968 Q6SPF0 SAMD1 Atherin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 76.946 77.006 2;3 2.1335E-27 89192 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 94.057 89.253 475280000 0 0 0 25475000 29370000 27306000 41171000 28080000 29503000 44852000 48392000 57758000 36009000 39882000 67481000 537 2968 489 4574;4575;4576;4577;4578;4579;4580;4581;4582;4583;4584;4585;4586;4587;4588;4589;4590;4591;4592;4593;4594;4595;4596;4597 3688;3689;3690;3691;3692;3693;3694;3695;3696;3697;3698;3699;3700 3696 13 AAPLIVEVFNK Unmodified 1199.6914 0.69140938 3637 Q92610 ZNF592 Zinc finger protein 592 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 5 3.56 1 1 1 1 1 1 89.237 85.513 2 0.0084329 98961 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.528 34.142 31159000 20472000 4304200 0 0 0 0 0 0 0 0 0 0 0 0 6383200 538 3637 490 4598;4599;4600 3701;3702;3703 3701 3 AAPLLHTRLPGDAAASSSAVK Acetyl (Protein N-term) 2074.1171 0.11710203 4753 Q9NYV6 RRN3 RNA polymerase I-specific transcription initiation factor RRN3 yes yes 1 0 1 By MS/MS 2 0 1 1 81.462 73.332 3 4.1393E-14 96124 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.492 63.551 18268000 18268000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 539 4753 491 4601 3704 3704 1 AAPLSVEVEFGGGAELLFDGIK Acetyl (Protein N-term) 2260.1627 0.16271482 4148 Q9BTM9 URM1 Ubiquitin-related modifier 1 yes yes 1 0 0 By MS/MS 2 0 1 1 102.33 99.953 3 3.1985E-11 120559 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 62.684 58.331 2252700 0 0 2252700 0 0 0 0 0 0 0 0 0 0 0 0 540 4148 492 4602 3705 3705 1 AAPLVTSGK Unmodified 842.48617 0.48616764 2779 Q5T6F2 UBAP2 Ubiquitin-associated protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 19.884 20.067 2 0.020656 21016 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 52.937 27.855 203490000 0 0 0 0 18842000 0 25428000 0 23712000 33731000 0 0 28807000 31817000 41155000 541 2779 493 4603;4604;4605;4606;4607;4608;4609 3706;3707;3708 3708 3 AAPMTPAARPEDYEAALNAALADVPELAR Acetyl (Protein N-term) 3035.5022 0.50223499 2101 Q04446 GBE1 1,4-alpha-glucan-branching enzyme yes yes 1 0 1 By MS/MS 2 0 1 1 100.35 95.635 3 8.8654E-09 118206 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 59.573 55.345 10351000 0 10351000 0 0 0 0 0 0 0 0 0 0 0 0 0 542 2101 494 4610 3709 3709 1 AAPPAPNAPAAGEDTTETAPAPGTPAR Unmodified 2498.2037 0.20374478 4016 Q99501 GAS2L1 GAS2-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 50.327 50.123 3 0.031389 55845 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 17.527 9.9057 7796900 0 0 0 4430300 0 0 0 0 0 0 0 0 0 3366700 0 543 4016 495 4611;4612 3710 3710 1 AAPPDVGEER Unmodified 1039.4934 0.49343786 3047 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.034 22.241 2 0.0055824 22048 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 68.371 44.602 496050000 0 0 0 24655000 24189000 26567000 35555000 22464000 32435000 48361000 56189000 63681000 61271000 42043000 58637000 544 3047 496 4613;4614;4615;4616;4617;4618;4619;4620;4621;4622;4623;4624 3711;3712;3713;3714;3715;3716;3717 3715 7 AAPPDVGEERR Unmodified 1195.5945 0.59454889 3047 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 17.872 17.857 3 0.015517 17834 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 30.729 18.515 30384000 0 0 0 4119800 6206300 6357600 0 0 5950500 7749700 0 0 0 0 0 545 3047 497 4625;4626;4627;4628;4629 3718 3718 1 AAPPPPGYHQNGVIR Unmodified 1572.8161 0.8161094 2215 Q12965 MYO1E Unconventional myosin-Ie yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 35.835 35.985 3 0.011541 40069 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 29.355 24.807 33912000 0 0 0 0 4360200 7507400 0 0 0 0 0 13556000 0 8488400 0 546 2215 498 4630;4631;4632;4633 3719;3720 3720 2 AAPPQIPDTRR Unmodified 1220.6626 0.66256887 4485 Q9HAF1 MEAF6 Chromatin modification-related protein MEAF6 yes yes 0 0 1 By MS/MS 10 0 1 1 32.172 32.326 3 0.0285 35420 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 47.559 34.983 20833000 0 0 0 0 0 0 0 0 0 20833000 0 0 0 0 0 547 4485 499 4634 3721 3721 0 AAPQSPSVPK Unmodified 980.5291 0.52909508 533 O75694 NUP155 Nuclear pore complex protein Nup155 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.063 24.268 2 0.008766 25446 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 59.245 33.351 369230000 0 0 0 20826000 20159000 37354000 29758000 29129000 16975000 33102000 36204000 39875000 30113000 29187000 46551000 548 533 500 4635;4636;4637;4638;4639;4640;4641;4642;4643;4644;4645;4646 3722;3723;3724;3725;3726;3727;3728;3729;3730 3726 6 AAPREEPLTPR Unmodified 1235.6622 0.66223452 276 O15357 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.962 24.167 3 0.0013023 25543 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 58.172 46.026 220720000 0 0 0 11758000 13566000 17162000 15422000 16982000 15628000 19708000 15852000 25327000 16818000 19683000 32817000 549 276 501 4647;4648;4649;4650;4651;4652;4653;4654;4655;4656;4657;4658 3731;3732;3733;3734;3735;3736;3737;3738;3739;3740;3741;3742 3735 5 AAPRPAPVAQPPAAAPPSAVGSSAAAPR Unmodified 2532.3561 0.35610352 5283 Q9Y6H1;Q5T1J5 CHCHD2;CHCHD2P9 Coiled-coil-helix-coiled-coil-helix domain-containing protein 2;Putative coiled-coil-helix-coiled-coil-helix domain-containing protein CHCHD2P9, mitochondrial yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 56.859 56.958 3 2.568E-25 64615 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 80.02 72.804 133920000 0 0 0 6198500 4477000 5149200 10265000 0 0 11707000 20618000 20710000 0 16987000 37808000 550 5283 502 4659;4660;4661;4662;4663;4664;4665;4666;4667;4668;4669 3743;3744;3745;3746;3747;3748;3749;3750;3751;3752;3753;3754;3755 3749 13 AAPRPSPAISVSVSAPAFYAPQK Acetyl (Protein N-term) 2353.243 0.24303082 2595 Q15942 ZYX Zyxin yes yes 1 0 1 By MS/MS 2 0 1 1 88.401 83.559 3 5.9884E-05 103886 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 40.88 36.004 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 551 2595 503 4670 3756 3756 1 AAPSAGSWSTFQHK Acetyl (Protein N-term) 1515.7106 0.71064128 1459 P42575 CASP2 Caspase-2;Caspase-2 subunit p18;Caspase-2 subunit p13;Caspase-2 subunit p12 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 64.562 63.342 2 7.8934E-35 79765 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 187.42 175.2 154440000 4983800 66309000 0 0 4075700 7495900 5351700 4158500 4315300 9698500 9592300 10111000 9521600 4686400 14143000 552 1459 504 4671;4672;4673;4674;4675;4676;4677;4678;4679;4680;4681;4682;4683;4684;4685 3757;3758;3759;3760;3761;3762;3763;3764;3765;3766;3767;3768;3769;3770;3771;3772;3773;3774;3775 3761 19 AAPSDGFKPR Acetyl (Protein N-term) 1086.5458 0.54580778 3694 Q92979 EMG1 Ribosomal RNA small subunit methyltransferase NEP1 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 36.185 35.591 2 0.0094904 39509 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 58.433 44.276 120160000 0 26967000 0 6119900 4939100 5464800 6823600 5976600 3523300 6242400 10390000 13359000 8176900 0 22179000 553 3694 505 4686;4687;4688;4689;4690;4691;4692;4693;4694;4695;4696;4697;4698 3776;3777;3778;3779;3780;3781;3782 3781 5 AAPSPSGGGGSGGGSGSGTPGPVGSPAPGHPAVSSMQGK Acetyl (Protein N-term) 3284.5116 0.51163048 1491 P45985 MAP2K4 Dual specificity mitogen-activated protein kinase kinase 4 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 57.041 57.395 3 3.9676E-45 65172 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 60.48 55.948 34109000 0 0 0 0 0 8092900 0 0 0 0 9106200 0 0 0 16910000 554 1491 506 4699;4700;4701 3783;3784;3785 3783 3 AAPSPSGGGGSGGGSGSGTPGPVGSPAPGHPAVSSMQGK Acetyl (Protein N-term);Oxidation (M) 3300.5065 0.5065451 1491 P45985 MAP2K4 Dual specificity mitogen-activated protein kinase kinase 4 yes yes 1 1 0 By MS/MS 10 0 1 1 49.943 50.002 3 1.4646E-18 56545 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 44.75 42.3 8511100 0 0 0 0 0 0 8511100 0 0 0 0 0 0 0 0 555 1491 506 4702 3786 3786 2341 1 AAPSSEGDSCDGVEATEGPGSADTEEPK Unmodified 2749.1145 0.11445659 1406 P39880 CUX1 Homeobox protein cut-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 39.916 40.107 3 5.7817E-18 44469 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 58.877 58.874 83487000 0 0 0 0 7714300 5886700 11680000 6409300 8454300 9647700 10470000 6797200 9187500 7239900 0 556 1406 507 4703;4704;4705;4706;4707;4708;4709;4710;4711;4712 3787;3788;3789;3790;3791;3792;3793;3794;3795;3796;3797 3792 11 AAPSTAPAEATPPKPGEAEAPPK Unmodified 2184.1063 0.10626257 694 O95817 BAG3 BAG family molecular chaperone regulator 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 40.643 40.974 3 2.9972E-16 44877 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.172 66.869 214280000 0 0 0 0 0 0 20631000 17000000 12052000 27613000 0 42603000 19939000 23509000 50938000 557 694 508 4713;4714;4715;4716;4717;4718;4719;4720;4721 3798;3799;3800;3801;3802;3803;3804;3805;3806;3807;3808 3802 10 AAPSVTLFPPSSEELQANK Unmodified 1985.0106 0.010571271 911 P0DOY3;P0DOY2;P0CF74;A0M8Q6 IGLC6;IGLC7 Ig lambda-6 chain C region;Ig lambda-7 chain C region yes no 0 0 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 2 1 1 2 80.204 80.231 2;3 2.6968E-08 93266 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 110.38 101.87 91919000 0 0 0 12043000 2746600 0 3128300 34366000 0 24570000 0 6470500 8593700 0 0 558 911 509 4722;4723;4724;4725;4726;4727;4728;4729;4730 3809;3810;3811 3811 2 AAPTAASDQPDSAATTEK Unmodified 1730.7959 0.79588705 4112 Q9BRP8 WIBG Partner of Y14 and mago yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 21.959 22.195 2 1.4804E-62 22651 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 170.79 158.58 135020000 0 0 0 4349400 2822000 0 4908000 4738500 0 5180800 29763000 25379000 6326200 18054000 33495000 559 4112 510 4731;4732;4733;4734;4735;4736;4737;4738;4739;4740;4741;4742;4743 3812;3813;3814;3815;3816;3817;3818;3819;3820;3821;3822;3823;3824 3818 12 AAPTPTPAPVPVPVPLPAPAPAPHGEAR Unmodified 2674.4595 0.45950596 3999 Q96T58 SPEN Msx2-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 84.105 84.169 3 4.1974E-21 97241 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 66.447 63.618 129850000 0 0 0 4605100 8500300 9214700 11296000 13971000 8450400 9357600 12137000 17652000 9137900 11167000 14356000 560 3999 511 4744;4745;4746;4747;4748;4749;4750;4751;4752;4753;4754;4755 3825;3826;3827;3828;3829;3830;3831;3832;3833;3834;3835;3836;3837;3838;3839;3840 3827 16 AAPVDLELK Acetyl (Protein N-term) 996.54916 0.54916182 446 O60925 PFDN1 Prefoldin subunit 1 yes yes 1 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 4.33 4.03 2 2 2 2 1 1 1 1 88.46 87.638 2 0.0090674 90570 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 61.679 34.549 383160000 346860000 12128000 1782600 3093500 0 0 0 0 0 0 0 0 0 19291000 0 561 446 512 4756;4757;4758;4759;4760;4761 3841;3842;3843;3844 3841 4 AAPVDLELKK Acetyl (Protein N-term) 1124.6441 0.64412484 446 O60925 PFDN1 Prefoldin subunit 1 yes yes 1 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 69.428 63.154 2 0.011908 80690 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 61.691 44.326 327480000 4194500 323280000 0 0 0 0 0 0 0 0 0 0 0 0 0 562 446 513 4762;4763;4764 3845;3846 3845 1 AAPVLPTTHNHK Unmodified 1284.6939 0.693869 1462 P42684 ABL2 Abelson tyrosine-protein kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 20.58 20.321 3 0.0046933 20522 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 50.207 43.975 175700000 33646000 0 0 7189800 9984300 12095000 0 9469200 10957000 15221000 18411000 19821000 13670000 10913000 14321000 563 1462 514 4765;4766;4767;4768;4769;4770;4771;4772;4773;4774;4775;4776 3847;3848;3849;3850 3847 3 AAPVVAPPGVVVSR Acetyl (Protein N-term) 1359.7874 0.78743503 2241 Q13144 EIF2B5 Translation initiation factor eIF-2B subunit epsilon yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 80.673 80.719 2 0.00030739 92935 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 62.303 51.083 123210000 0 0 0 5829600 7221600 13074000 8257800 9825600 6779600 12502000 15779000 17870000 10865000 15205000 0 564 2241 515 4777;4778;4779;4780;4781;4782;4783;4784;4785;4786;4787 3851;3852;3853;3854;3855;3856;3857;3858;3859;3860;3861 3854 11 AAQAGPTQPGPPR Unmodified 1246.6418 0.64183343 4164 Q9BUL5 PHF23 PHD finger protein 23 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 21.479 21.709 2 1.4409E-08 21557 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 109.79 77.855 102840000 0 0 0 9201800 4768600 0 10433000 0 6433900 12466000 10447000 13171000 10911000 11534000 13476000 565 4164 516 4788;4789;4790;4791;4792;4793;4794;4795;4796;4797;4798 3862;3863;3864;3865;3866;3867;3868;3869;3870;3871 3864 8 AAQALALLR Acetyl (Protein N-term) 967.58147 0.581465 2602 Q16401 PSMD5 26S proteasome non-ATPase regulatory subunit 5 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 93.247 93.322 2 0.0009879 108610 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 127.12 58.203 209220000 0 0 0 4449200 10822000 16997000 9983500 11424000 6555000 29670000 21405000 28287000 11962000 16822000 40844000 566 2602 517 4799;4800;4801;4802;4803;4804;4805;4806;4807;4808;4809;4810 3872;3873;3874;3875;3876;3877;3878;3879;3880;3881 3879 10 AAQAPDGASEPR Unmodified 1168.5473 0.54726434 942 P11274 BCR Breakpoint cluster region protein yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.969 14.131 2 0.040156 13501 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 51.276 45.241 29789000 0 0 0 1384000 1203700 2749300 2290400 1811400 1331100 3179500 3932300 3796800 3139200 1921700 3050100 567 942 518 4811;4812;4813;4814;4815;4816;4817;4818;4819;4820;4821;4822 3882;3883;3884 3882 2 AAQAPSSFQLLYDLK Unmodified 1650.8617 0.86172219 953 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 88.092 88.201 2 3.706E-10 102099 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 117.98 111.32 106730000 0 0 0 0 4157800 7723500 14013000 8507200 7268000 0 10266000 10698000 3467800 7387300 33238000 568 953 519 4823;4824;4825;4826;4827;4828;4829;4830;4831;4832 3885;3886;3887;3888;3889;3890;3891;3892;3893;3894 3887 10 AAQASDLEK Unmodified 931.46108 0.4610751 1392 P37837 TALDO1 Transaldolase yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 6.91 4.1 2 2 7 2 2 1 1 1 1 1 1 1 32.556 32.528 2 0.0036808 9507 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 111.17 72.376 296900000 57331000 196930000 0 0 751050 0 0 3251000 0 1030400 18380000 19222000 0 0 0 569 1392 520 4833;4834;4835;4836;4837;4838;4839;4840;4841;4842;4843 3895;3896;3897;3898;3899;3900;3901 3901 5 AAQDIKDEEPGDLGR Unmodified 1612.7693 0.76927837 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 0 1 By MS/MS By MS/MS By matching 10 0 3 1 1 1 36.67 36.669 3 0.037494 41135 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 20.111 12.909 37893000 0 0 0 11112000 0 0 0 10757000 0 0 0 0 0 16024000 0 570 4139 521 4844;4845;4846 3902 3902 1 AAQDLCEEALR Unmodified 1274.5925 0.59249998 601 O94906 PRPF6 Pre-mRNA-processing factor 6 yes yes 0 0 0 By MS/MS 10 0 1 1 44.542 44.798 2 0.001274 49304 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 93.111 73.324 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 571 601 522 4847 3903 3903 1 AAQDRDQIYR Unmodified 1234.6054 0.60544792 1935 P62995 TRA2B Transformer-2 protein homolog beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 2 1 1 1 1 1 14.859 15.029 3 0.00020945 14792 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 112.75 87.894 586390000 0 0 0 31508000 27685000 31828000 44693000 23806000 27227000 49093000 76428000 64905000 52186000 57233000 99797000 572 1935 523 4848;4849;4850;4851;4852;4853;4854;4855;4856;4857;4858;4859;4860 3904;3905;3906;3907;3908;3909;3910;3911;3912;3913;3914;3915;3916;3917 3914 9 AAQEEYVK Unmodified 936.45526 0.45526144 771 P04075 ALDOA Fructose-bisphosphate aldolase A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 6.32 4.05 2 7 1 12 2 6 2 1 1 1 1 1 1 1 1 1 1 1 1 23.53 22.935 2 0.0052431 13729 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 107.59 77.174 5243900000 749100000 2982800000 51004000 41389000 37196000 45637000 49537000 41178000 34864000 53469000 222450000 172020000 42933000 207570000 512770000 573 771 524 4861;4862;4863;4864;4865;4866;4867;4868;4869;4870;4871;4872;4873;4874;4875;4876;4877;4878;4879;4880;4881;4882 3918;3919;3920;3921;3922;3923;3924;3925;3926;3927;3928;3929;3930;3931;3932;3933;3934;3935;3936;3937;3938;3939;3940;3941;3942 3940 23 AAQELQEGQR Unmodified 1128.5523 0.55234972 910 P0DN79;P35520 CBS Cystathionine beta-synthase yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.363 12.514 2 3.7225E-08 11722 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 155.1 121.1 149940000 0 0 0 4677600 5353800 18767000 8276100 6321000 5279700 17557000 17120000 17586000 11787000 14508000 22711000 574 910 525 4883;4884;4885;4886;4887;4888;4889;4890;4891;4892;4893;4894 3943;3944;3945;3946;3947;3948;3949;3950;3951;3952;3953;3954;3955 3944 13 AAQEQVLNASR Unmodified 1185.6102 0.61019895 4021 Q99543 DNAJC2 DnaJ homolog subfamily C member 2;DnaJ homolog subfamily C member 2, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 26.922 26.401 2 0.0035595 27441 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 104.22 77.779 79745000 0 37311000 0 0 1922200 2356900 3932000 0 2866800 3966900 4195900 8828500 4258000 3774400 6332400 575 4021 526 4895;4896;4897;4898;4899;4900;4901;4902;4903;4904;4905;4906 3956;3957;3958;3959;3960;3961;3962 3959 4 AAQEQVLNASRAK Unmodified 1384.7423 0.74227576 4021 Q99543 DNAJC2 DnaJ homolog subfamily C member 2;DnaJ homolog subfamily C member 2, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 28.013 23.696 3 0.005354 30172 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 88.092 73.216 78520000 15987000 44662000 17871000 0 0 0 0 0 0 0 0 0 0 0 0 576 4021 527 4907;4908;4909;4910 3963;3964;3965 3965 1 AAQGEPQVQFK Acetyl (Protein N-term) 1243.6197 0.619701 1912 P62826 RAN GTP-binding nuclear protein Ran yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.36 4.01 2 6 2 12 5 3 2 1 1 1 1 1 1 1 1 1 1 1 1 60.548 59.829 2;3 2.603E-11 62314 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 152.47 130.62 3188900000 921270000 246250000 25162000 61835000 43500000 67526000 72707000 80278000 44626000 88302000 284780000 310430000 92937000 214660000 634610000 577 1912 528 4911;4912;4913;4914;4915;4916;4917;4918;4919;4920;4921;4922;4923;4924;4925;4926;4927;4928;4929;4930;4931;4932 3966;3967;3968;3969;3970;3971;3972;3973;3974;3975;3976;3977;3978;3979;3980;3981;3982;3983;3984;3985;3986;3987;3988 3985 20 AAQGVGPGPGSAAPPGLEAAR Acetyl (Protein N-term) 1871.949 0.94897407 2910 Q6NZ67;Q6P582 MZT2B;MZT2A Mitotic-spindle organizing protein 2B;Mitotic-spindle organizing protein 2A yes no 1 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.427 71.499 2 7.2128E-16 81738 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 105.46 91.871 144810000 0 0 0 9124300 9641500 9228100 10964000 9774300 8155900 12579000 17013000 15426000 14652000 11627000 16623000 578 2910 529 4933;4934;4935;4936;4937;4938;4939;4940;4941;4942;4943;4944 3989;3990;3991;3992;3993;3994;3995;3996;3997;3998 3990 9 AAQGVGPGPGSAAPPGLEAARQK Acetyl (Protein N-term) 2128.1025 0.1025146 2910 Q6NZ67;Q6P582 MZT2B;MZT2A Mitotic-spindle organizing protein 2B;Mitotic-spindle organizing protein 2A yes no 1 0 1 By MS/MS 2 0 1 1 66.293 60.375 3 0.00014597 77269 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 46.558 37.897 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 579 2910 530 4945 3999 3999 1 AAQIPIVATTSTPGIVR Acetyl (Protein N-term) 1735.9832 0.98323431 2952 Q6PI98 INO80C INO80 complex subunit C yes yes 1 0 0 By MS/MS By MS/MS 10 0 2 1 1 89.137 89.223 2 0.00037891 103472 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.013 45.289 9805100 0 0 0 0 0 2863200 0 0 0 0 0 6941900 0 0 0 580 2952 531 4946;4947 4000;4001 4000 2 AAQLATEIADIK Unmodified 1242.682 0.68196691 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 71.49 71.285 2 0.00026786 86474 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 113.93 91.186 185130000 0 113530000 0 2368800 1991800 3865400 2736900 3269900 1506700 6048200 9256900 10302000 4629400 7498000 18125000 581 2495 532 4948;4949;4950;4951;4952;4953;4954;4955;4956;4957;4958;4959;4960 4002;4003;4004;4005;4006;4007;4008;4009;4010;4011;4012;4013 4008 11 AAQLLEEK Acetyl (Protein N-term) 942.50221 0.50221163 2957 Q6PJ69 TRIM65 Tripartite motif-containing protein 65 yes yes 1 0 0 By MS/MS 1 0 1 1 104.77 110.03 2 0.0008254 90394 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 119.29 85.74 20097000 20097000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 582 2957 533 4961 4014 4014 1 AAQLQHSEK Unmodified 1010.5145 0.51450765 2598 Q16204 CCDC6 Coiled-coil domain-containing protein 6 yes yes 0 0 0 By MS/MS 3 0 1 1 5.8594 2.4981 2 0.0067071 3939 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 103.74 75.227 4341800 0 4341800 0 0 0 0 0 0 0 0 0 0 0 0 0 583 2598 534 4962 4015 4015 1 AAQQAASSSGQGQQAQTPTGK Unmodified 2000.9512 0.95115891 1551 P48729 CSNK1A1 Casein kinase I isoform alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 11.95 11.774 3 0.00057677 15158 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.371 43.369 46938000 5720700 0 0 2057100 2117100 3714800 3505000 3086800 2219700 4109500 2538400 2556900 3826800 4734600 6750800 584 1551 535 4963;4964;4965;4966;4967;4968;4969;4970;4971;4972;4973;4974;4975 4016;4017;4018;4019;4020 4019 5 AAQQFSK Unmodified 778.39735 0.39735263 3639 Q92614 MYO18A Unconventional myosin-XVIIIa yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 7.7793 5.0419 2 0.029674 7078 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.407 52.905 22537000 0 18445000 4092200 0 0 0 0 0 0 0 0 0 0 0 0 585 3639 536 4976;4977 4021 4021 1 AAQQQEEQEEKEEEDDEQTLHR Unmodified 2698.159 0.15903902 1971 P78318 IGBP1 Immunoglobulin-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 2 1 2 2 2 1 1 2 2 1 1 2 28.4 28.616 3;4 8.4933E-16 29861 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 78.456 77.143 372720000 0 0 0 14933000 10165000 23976000 21018000 20925000 2441600 48627000 52734000 79526000 20833000 25762000 51778000 586 1971 537 4978;4979;4980;4981;4982;4983;4984;4985;4986;4987;4988;4989;4990;4991;4992;4993;4994;4995;4996 4022;4023;4024;4025 4023 4 AAQRDNEEETTDDPRK Unmodified 1873.8402 0.84021148 4010 Q99459 CDC5L Cell division cycle 5-like protein yes yes 0 0 2 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.57 3.06 5 23 2 1 2 2 2 2 2 2 2 2 2 2 2 2 1 6.8674 6.4356 3;4 9.1691E-41 5045 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 127.05 123.21 512180000 40455000 2525700 19356000 25167000 29928000 27739000 39021000 23793000 31252000 51940000 53592000 43712000 52387000 42133000 29176000 587 4010 538 4997;4998;4999;5000;5001;5002;5003;5004;5005;5006;5007;5008;5009;5010;5011;5012;5013;5014;5015;5016;5017;5018;5019;5020;5021;5022;5023;5024 4026;4027;4028;4029;4030;4031;4032;4033;4034;4035;4036;4037;4038;4039;4040;4041;4042 4037 15 AAQSLLNK Unmodified 843.48142 0.48141661 4655;5016 Q9NUU7;Q9UMR2 DDX19A;DDX19B ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX19B no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 1 2 2 2 23.368 23.551 2 0.0068169 23174 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 95.541 34.893 645930000 0 0 0 33625000 31350000 51929000 44389000 31118000 24890000 63966000 53526000 58120000 73771000 70893000 108360000 588 4655;5016 539 5025;5026;5027;5028;5029;5030;5031;5032;5033;5034;5035;5036;5037;5038;5039;5040;5041;5042;5043;5044;5045;5046;5047 4043;4044;4045;4046;4047;4048;4049;4050;4051;4052;4053 4049 10 AAQTAEDAMQIMEQMTK Oxidation (M) 1911.8376 0.83763398 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 1 0 By MS/MS 2 0 1 1 79.218 74.483 3 0.0035599 92789 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 41.261 35.807 51434000 0 51434000 0 0 0 0 0 0 0 0 0 0 0 0 0 589 1286 540 5048 4054 4054 1889 1 AAQTAEDAMQIMEQMTK Unmodified 1895.8427 0.84271936 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 90.956 88.55 2;3 0.00025094 109996 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.89 61.269 161140000 0 157210000 830200 0 0 0 0 0 0 0 0 0 0 0 3105700 590 1286 540 5049;5050;5051 4055;4056 4055 2 AAQTAERLDQDINATK Unmodified 1743.8751 0.87514042 2555 Q15642 TRIP10 Cdc42-interacting protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 8.1 3.3 3 2 15 4 1 1 2 2 1 2 1 1 1 1 2 1 40.028 38.907 2;3 9.1099E-08 42026 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.803 60.4 277330000 0 206560000 6023300 0 5063900 16348000 9888400 1877400 6404200 4440600 3883600 5471900 2257500 9109700 0 591 2555 541 5052;5053;5054;5055;5056;5057;5058;5059;5060;5061;5062;5063;5064;5065;5066;5067;5068;5069;5070;5071 4057;4058;4059;4060;4061;4062;4063;4064;4065;4066;4067 4063 10 AAQVAPAAASSLGNPPPPPPSELK Acetyl (Protein N-term) 2308.2063 0.20631097 183 O14497 ARID1A AT-rich interactive domain-containing protein 1A yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 5.5 4.5 2 2 1 1 1 1 91.78 93.291 3 3.2558E-06 93188 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 44.258 35.97 67390000 13276000 36480000 0 0 6418000 0 0 0 0 0 0 11216000 0 0 0 592 183 542 5072;5073;5074;5075 4068;4069;4070;4071;4072 4072 5 AAQVAQDEEIAR Unmodified 1299.6419 0.64189301 3230 Q8IVM0 CCDC50 Coiled-coil domain-containing protein 50 yes yes 0 0 0 By MS/MS 10 0 1 1 28.501 29.196 2 0.0013988 30537 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.658 69.572 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 593 3230 543 5076 4073 4073 1 AAQVGLLFLK Unmodified 1058.6488 0.64881629 2905 Q6NXR4 TTI2 TELO2-interacting protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 85.054 84.426 2 0.0037884 97961 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 75.213 50.29 73538000 7520700 0 0 3664500 4189100 8741800 4131500 4271100 0 7848400 5007100 8787900 4240000 3915100 11221000 594 2905 544 5077;5078;5079;5080;5081;5082;5083;5084;5085;5086;5087;5088 4074;4075;4076;4077;4078;4079;4080 4074 7 AAQVMGPPDR Unmodified 1040.5073 0.50731378 3873 Q96I24 FUBP3 Far upstream element-binding protein 3 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.44 27.638 2 0.0019707 28518 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.308 54.467 93926000 0 0 0 3490400 2713100 7170400 5958200 4933500 6910200 8150500 11573000 8983200 8372900 8043000 17627000 595 3873 545 5089;5090;5091;5092;5093;5094;5095;5096;5097;5098;5099;5100 4081;4082;4083;4084;4085;4086;4087;4088;4089;4090 4084 10 AAQVMGPPDR Oxidation (M) 1056.5022 0.50222841 3873 Q96I24 FUBP3 Far upstream element-binding protein 3 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 16.74 16.921 2 0.0042899 16595 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 64.711 25.92 71705000 0 0 0 3770000 3704000 5064700 5976400 4848700 0 5469900 7084100 8508700 9060500 7383300 10835000 596 3873 545 5101;5102;5103;5104;5105;5106;5107;5108;5109;5110;5111 4091;4092;4093;4094;4095 4095 5380 3 AAQYGLQLVESQNELQNQLDK Unmodified 2388.1921 0.19211747 3806 Q96EA4 SPDL1 Protein Spindly yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 86.151 81.867 2;3 3.2084E-181 101754 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 293.35 202.56 211380000 0 211380000 0 0 0 0 0 0 0 0 0 0 0 0 0 597 3806 546 5112;5113;5114 4096;4097;4098 4097 3 AAQYQVNQAAAAQAAATAAAMTQSAVK Oxidation (M) 2621.2868 0.28676291 4594 Q9NR56 MBNL1 Muscleblind-like protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 1 2 2 2 2 2 2 2 2 2 2 2 77.608 77.689 3 2.7031E-61 88722 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 110.94 107.32 554350000 0 0 0 7675400 32834000 47738000 41613000 52849000 39115000 70477000 58210000 55387000 25480000 50169000 72800000 598 4594 547 5115;5116;5117;5118;5119;5120;5121;5122;5123;5124;5125;5126;5127;5128;5129;5130;5131;5132;5133;5134;5135;5136;5137 4099;4100;4101;4102;4103;4104;4105;4106;4107;4108;4109;4110;4111;4112;4113;4114;4115;4116;4117 4111 5999 19 AAQYQVNQAAAAQAAATAAAMTQSAVK Unmodified 2605.2918 0.29184828 4594 Q9NR56 MBNL1 Muscleblind-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 85.968 86.119 3 1.3414E-73 99653 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 128.07 125.22 159530000 0 0 0 0 0 0 5699500 11795000 8680200 28619000 19199000 18639000 3058300 10994000 52841000 599 4594 547 5138;5139;5140;5141;5142;5143;5144;5145;5146 4118;4119;4120;4121;4122 4121 2 AAREALLSSAVDHGSDEVK Unmodified 1953.9756 0.97558275 1980 P78371 CCT2 T-complex protein 1 subunit beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.08 0.392 1 21 3 14 6 5 58.005 52.125 2;3;4 1.2435E-71 69597 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 153.88 138.25 8819700000 7556200000 977520000 285980000 0 0 0 0 0 0 0 0 0 0 0 0 600 1980 548 5147;5148;5149;5150;5151;5152;5153;5154;5155;5156;5157;5158;5159;5160;5161;5162;5163;5164;5165;5166;5167;5168;5169;5170;5171 4123;4124;4125;4126;4127;4128;4129;4130;4131;4132;4133;4134;4135;4136;4137;4138;4139;4140;4141;4142;4143;4144;4145;4146;4147;4148;4149;4150;4151 4136 22 AAREECPVFTPPGGETLDQVK Unmodified 2300.1107 0.11069602 4560 Q9NQ88 TIGAR Fructose-2,6-bisphosphatase TIGAR yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 75.292 71.472 3 0.00018527 86940 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 60.602 56.496 113100000 0 93125000 19973000 0 0 0 0 0 0 0 0 0 0 0 0 601 4560 549 5172;5173;5174 4152;4153;4154 4154 3 AARELLTLDEK Unmodified 1257.6929 0.69286595 1511 P46781 RPS9 40S ribosomal protein S9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 6 2 3 3 2 57.506 51.738 2;3 7.9106E-07 70575 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 136.02 86.209 664060000 447190000 159490000 57385000 0 0 0 0 0 0 0 0 0 0 0 0 602 1511 550 5175;5176;5177;5178;5179;5180;5181;5182 4155;4156;4157;4158;4159;4160;4161;4162 4160 4 AARQSVYEEK Unmodified 1179.5884 0.58840088 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 1 By MS/MS By matching By MS/MS 2 0 5 2 1 2 12.001 8.8587 2;3 0.004842 13585 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.197 59.568 555640000 412240000 23895000 119500000 0 0 0 0 0 0 0 0 0 0 0 0 603 2378 551 5183;5184;5185;5186;5187 4163;4164;4165 4163 3 AARSIPAGAEPGEK Unmodified 1352.7048 0.70482762 4460 Q9H910 HN1L Hematological and neurological expressed 1-like protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 25.54 21.379 3 0.00059778 30405 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.315 64.974 1197600000 697510000 288570000 211530000 0 0 0 0 0 0 0 0 0 0 0 0 604 4460 552 5188;5189;5190;5191 4166;4167;4168;4169;4170;4171;4172;4173;4174 4169 7 AARVIIEK Unmodified 898.56 0.56000128 871 P08708 RPS17 40S ribosomal protein S17 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 24.297 20.3 2 0.033604 28758 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 106.36 12.094 428940000 422230000 0 6715600 0 0 0 0 0 0 0 0 0 0 0 0 605 871 553 5192;5193 4175 4175 0 AARVLGSEGEEEDEALSPAK Unmodified 2056.9913 0.99129239 1081 P18858 LIG1 DNA ligase 1 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 52.568 47.694 3 0.00030278 62387 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 50.956 48.559 33949000 0 19724000 14225000 0 0 0 0 0 0 0 0 0 0 0 0 606 1081 554 5194;5195;5196 4176;4177;4178 4176 3 AASAAAAELQASGGPR Acetyl (Protein N-term) 1468.727 0.72701962 4519 Q9HCN4 GPN1 GPN-loop GTPase 1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 69.314 69.519 2 6.5048E-28 79345 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 130.56 120.28 42743000 0 0 0 0 0 3259100 2318600 2553700 0 4015800 5737700 5768100 6849900 4947500 7293100 607 4519 555 5197;5198;5199;5200;5201;5202;5203;5204;5205 4179;4180;4181;4182;4183;4184;4185;4186;4187 4182 9 AASAAAASAAAASAASGSPGPGEGSAGGEK Acetyl (Protein N-term) 2428.1102 0.11023833 2262 Q13263 TRIM28 Transcription intermediary factor 1-beta yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.96 3 2 2 12 5 2 1 1 1 1 1 1 1 1 1 1 1 1 74.749 74.376 2;3 3.2931E-290 84096 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 319.67 314.78 4905600000 1398300000 33596000 0 229710000 187440000 229900000 304230000 222860000 170730000 311300000 359940000 429610000 280480000 286270000 461260000 608 2262 556 5206;5207;5208;5209;5210;5211;5212;5213;5214;5215;5216;5217;5218;5219;5220;5221;5222;5223;5224 4188;4189;4190;4191;4192;4193;4194;4195;4196;4197;4198;4199;4200;4201;4202;4203;4204;4205;4206;4207;4208;4209;4210;4211;4212 4198 24 AASAAFQENVGR Unmodified 1219.5945 0.59454889 4152 Q9BTW9 TBCD Tubulin-specific chaperone D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 33.99 34.267 2 2.4209E-11 37792 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 150.35 126.92 61649000 0 0 0 0 0 9226800 3510900 4976900 0 7632100 11878000 10557000 6714300 7152900 0 609 4152 557 5225;5226;5227;5228;5229;5230;5231;5232;5233 4213;4214;4215;4216;4217;4218;4219;4220;4221 4213 9 AASAAGAAGSAGGSSGAAGAAGGGAGAGTRPGDGGTASAGAAGPGAATK Unmodified 3668.7123 0.71233221 4980 Q9UKY7 CDV3 Protein CDV3 homolog yes yes 0 0 1 By matching By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 2 2 2 35.089 35.611 3;4 4.7852E-147 38888 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 109.23 105.15 183920000 0 0 0 0 0 0 0 0 0 2758400 13445000 39921000 0 42195000 85602000 610 4980 558 5234;5235;5236;5237;5238;5239;5240;5241 4222;4223;4224;4225;4226 4226 5 AASAAQRELVAQGK Unmodified 1398.7579 0.75792582 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 6 2 2 2 27.258 22.981 2;3 3.4049E-28 29044 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 163.51 119.2 2491600000 1876700000 350940000 263970000 0 0 0 0 0 0 0 0 0 0 0 0 611 5187 559 5242;5243;5244;5245;5246;5247 4227;4228;4229;4230;4231;4232;4233 4233 6 AASAFFTYVSLSQEGR Unmodified 1732.842 0.84204938 120 O00154 ACOT7 Cytosolic acyl coenzyme A thioester hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 85.648 85.629 2 6.3366E-15 99356 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 127.17 109.74 63802000 0 0 0 2714400 7190100 10193000 0 0 0 14977000 10068000 18660000 0 0 0 612 120 560 5248;5249;5250;5251;5252;5253 4234;4235;4236;4237;4238;4239;4240 4237 7 AASAGQEPLHNEELAGAGR Unmodified 1876.9028 0.90275216 3872 Q96HY6 DDRGK1 DDRGK domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 38.347 38.478 3 0.00012474 43156 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 47.204 36.149 25561000 0 0 0 0 3914400 0 4545900 4050000 0 6651900 0 6398300 0 0 0 613 3872 561 5254;5255;5256;5257;5258 4241;4242;4243;4244 4244 4 AASAPPPPDK Acetyl (Protein N-term) 991.49746 0.4974606 4113 Q9BRQ0 PYGO2 Pygopus homolog 2 yes yes 1 0 0 By MS/MS 1 0 1 1 76.121 81.385 2 0.023342 57917 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 43.083 31.314 2999000 2999000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 614 4113 562 5259 4245 4245 1 AASAPYFEVLEK Unmodified 1323.6711 0.67106787 4126 Q9BSJ2 TUBGCP2 Gamma-tubulin complex component 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 77.986 78.146 2 0.0041962 90228 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 70.942 58.705 55598000 0 0 0 0 0 16830000 0 0 15750000 0 17284000 0 0 0 5734300 615 4126 563 5260;5261;5262;5263 4246;4247 4246 2 AASAYAVGDVK Unmodified 1050.5346 0.53457439 990 P13861 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 32.7 32.858 2 0.0016293 36265 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 71.451 50.93 125740000 0 0 0 5706500 6665100 13151000 6412100 11244000 5718100 14658000 0 14216000 15736000 9385700 22843000 616 990 564 5264;5265;5266;5267;5268;5269;5270;5271;5272;5273;5274 4248;4249;4250;4251;4252;4253;4254 4254 4 AASCVLLHTGQK Acetyl (Protein N-term) 1325.6762 0.67617003 999 P14550 AKR1A1 Alcohol dehydrogenase [NADP(+)] yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.12 3.89 3 1 4 1 2 1 1 1 1 1 61.296 58.669 2 9.6998E-93 78531 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 262.61 232.04 1587700000 121990000 1383000000 19475000 0 0 0 0 0 0 0 11398000 9478100 0 10783000 31627000 617 999 565 5275;5276;5277;5278;5279;5280;5281;5282 4255;4256;4257;4258;4259;4260;4261;4262;4263;4264;4265;4266 4260 12 AASDIAMTELPPTHPIR Oxidation (M) 1834.9247 0.92473315 1882 P62258 YWHAE 14-3-3 protein epsilon yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 2 1 1 2 2 1 1 2 59.198 59.381 2;3 1.8499E-07 66525 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.37 77.103 236090000 0 0 0 18868000 0 8022600 0 0 0 16921000 37763000 53648000 9796900 19826000 71240000 618 1882 566 5283;5284;5285;5286;5287;5288;5289;5290;5291;5292;5293;5294 4267;4268;4269;4270;4271;4272;4273;4274;4275;4276;4277;4278;4279;4280 4269 3050 14 AASDIAMTELPPTHPIR Unmodified 1818.9298 0.92981853 1882 P62258 YWHAE 14-3-3 protein epsilon yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 6 2 1 3 69.445 69.812 2;3 5.8277E-25 79735 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 146.5 123.97 152580000 0 0 0 0 0 0 0 0 0 0 4796900 0 0 2755100 145020000 619 1882 566 5295;5296;5297;5298;5299;5300 4281;4282;4283;4284;4285;4286 4284 5 AASDIWKPVLSIDTEPR Unmodified 1896.9945 0.99452728 3897 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 82.775 82.912 3 0.0036468 95654 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 31.818 15.68 20853000 0 0 0 0 0 1734700 853390 0 1291100 3498300 0 2234300 0 0 11241000 620 3897 567 5301;5302;5303;5304;5305;5306 4287;4288;4289 4289 3 AASDPLLSSVSPAVSK Unmodified 1527.8144 0.81443765 1092 P19532 TFE3 Transcription factor E3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 71.552 71.664 2 0.0010544 82364 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 69.846 16.318 99291000 0 0 0 7448100 0 0 0 0 0 15434000 15386000 17255000 11522000 11269000 20977000 621 1092 568 5307;5308;5309;5310;5311;5312;5313 4290;4291;4292;4293;4294;4295 4292 6 AASDTERDGLAPEK Acetyl (Protein N-term) 1500.7056 0.70561548 3049 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.984 33.17 2 7.3572E-15 36106 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 117.79 91.119 110580000 0 0 0 7078700 6125300 11048000 6665900 0 14264000 9521500 13460000 14894000 9265800 7012100 11242000 622 3049 569 5314;5315;5316;5317;5318;5319;5320;5321;5322;5323;5324;5325 4296;4297;4298;4299;4300;4301;4302;4303;4304;4305;4306;4307 4300 11 AASEAAVVSSPSLK Acetyl (Protein N-term) 1357.7089 0.70890994 3572 Q8WWH5 TRUB1 Probable tRNA pseudouridine synthase 1 yes yes 1 0 0 By MS/MS 1 0 1 1 102.95 108.22 2 1.9186E-06 88163 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 122.7 104.39 24490000 24490000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 623 3572 570 5326 4308 4308 1 AASEQQADTSGGDSPK Unmodified 1547.67 0.66995825 2019 P85037 FOXK1 Forkhead box protein K1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.79 2.98 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 14.354 14.585 2 2.202E-169 4820 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 221.8 200.33 132960000 9228600 0 0 4859200 5053700 8738200 7044800 6901800 7266000 8843100 21222000 11111000 10380000 15514000 16798000 624 2019 571 5327;5328;5329;5330;5331;5332;5333;5334;5335;5336;5337;5338;5339;5340 4309;4310;4311;4312;4313;4314;4315;4316;4317;4318;4319;4320;4321;4322 4312 13 AASETTTSEGLSNFLK Unmodified 1654.805 0.80499517 3080 Q7Z3B3 KANSL1 KAT8 regulatory NSL complex subunit 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 79.094 75.029 2 6.9815E-66 93459 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 187.76 159.06 102540000 0 102540000 0 0 0 0 0 0 0 0 0 0 0 0 0 625 3080 572 5341;5342 4323;4324 4323 2 AASEVAGVVANAPSPPESSSLCASK Acetyl (Protein N-term) 2427.1588 0.15876843 3414 Q8ND24 RNF214 RING finger protein 214 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.62 3.25 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 85.71 86.269 3 8.4243E-24 95204 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 83.606 74.273 155590000 8057300 10785000 0 4396400 10966000 0 0 14210000 11010000 18661000 14235000 14928000 15458000 10365000 22518000 626 3414 573 5343;5344;5345;5346;5347;5348;5349;5350;5351;5352;5353;5354;5355 4325;4326;4327;4328;4329;4330;4331;4332;4333;4334;4335;4336;4337;4338;4339;4340;4341 4332 17 AASGESGTSGGGGSTEEAFMTFYSEVK Acetyl (Protein N-term) 2685.1388 0.13882084 562 O75937 DNAJC8 DnaJ homolog subfamily C member 8 yes yes 1 0 0 By MS/MS By MS/MS 2 0.707 1 2 1 2 2 97.786 95.05 3 1.1359E-66 89988 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 123.65 121.17 142610000 76344000 66265000 0 0 0 0 0 0 0 0 0 0 0 0 0 627 562 574 5356;5357;5358;5359 4342;4343;4344;4345 4343 4 AASGESGTSGGGGSTEEAFMTFYSEVK Acetyl (Protein N-term);Oxidation (M) 2701.1337 0.13373547 562 O75937 DNAJC8 DnaJ homolog subfamily C member 8 yes yes 1 1 0 By MS/MS 1 0 1 1 103.68 108.94 3 1.1288E-29 89106 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 91.114 88.64 12650000 12650000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 628 562 574 5360 4346 4346 725 1 AASGFNAMEDAQTLRK Oxidation (M) 1724.8152 0.8151827 887 P09525 ANXA4 Annexin A4 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 40.021 39.785 3 2.4208E-15 44199 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 99.451 92.042 118520000 0 0 33553000 17898000 0 4890600 11738000 0 0 8853200 10171000 14056000 8496200 8863200 0 629 887 575 5361;5362;5363;5364;5365;5366;5367;5368;5369;5370 4347;4348;4349;4350;4351;4352;4353;4354;4355;4356;4357;4358 4350 1139 11 AASGFNAMEDAQTLRK Unmodified 1708.8203 0.82026808 887 P09525 ANXA4 Annexin A4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 56.48 55.586 3 4.2402E-19 70168 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 122.93 110.65 171530000 16500000 0 27730000 14667000 6703700 0 8106900 12203000 5567800 0 21606000 14782000 8825100 11075000 23767000 630 887 575 5371;5372;5373;5374;5375;5376;5377;5378;5379;5380;5381;5382 4359;4360;4361;4362;4363;4364;4365;4366;4367;4368;4369;4370;4371 4365 11 AASGSGMAQK Acetyl (Protein N-term) 948.43348 0.43348014 3684 Q92905 COPS5 COP9 signalosome complex subunit 5 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 14.336 14.562 2 0.0020354 13932 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 65.465 26.659 70235000 0 0 0 3342000 0 0 0 0 4448100 9713600 14641000 0 11278000 0 26812000 631 3684 576 5383;5384;5385;5386;5387;5388;5389;5390 4372;4373;4374;4375 4373 4 AASHRALDDISESIK Unmodified 1611.8216 0.82164829 5153 Q9Y3B8 REXO2 Oligoribonuclease, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 5 2 2 1 55.104 48.722 3;4 1.4167E-15 63974 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.319 64.235 633090000 532920000 94421000 5741400 0 0 0 0 0 0 0 0 0 0 0 0 632 5153 577 5391;5392;5393;5394;5395 4376;4377;4378;4379;4380 4376 3 AASIFGGAK Unmodified 820.4443 0.44430282 1166 P23588 EIF4B Eukaryotic translation initiation factor 4B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 8.5 3.12 3 13 1 1 1 1 1 1 2 1 2 1 2 2 36.901 36.25 1;2 0.0072512 50790 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.561 63.141 1304100000 146130000 113770000 9096900 0 0 0 77140000 93426000 83005000 180780000 6088600 364500000 34716000 67306000 128190000 633 1166 578 5396;5397;5398;5399;5400;5401;5402;5403;5404;5405;5406;5407;5408;5409;5410;5411 4381;4382;4383;4384;4385 4383 4 AASITSEVFNK Unmodified 1165.5979 0.59790293 5231 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 57.523 56.196 2 0.00048985 73108 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.855 66.429 1009400000 20353000 780580000 10624000 11973000 10843000 17646000 14205000 14533000 9141600 17328000 20735000 22449000 17383000 13128000 28500000 634 5231 579 5412;5413;5414;5415;5416;5417;5418;5419;5420;5421;5422;5423;5424;5425;5426;5427 4386;4387;4388;4389;4390;4391;4392;4393 4388 6 AASLELSEVK Unmodified 1045.5655 0.56554017 2155 Q08378 GOLGA3 Golgin subfamily A member 3 yes yes 0 0 0 By MS/MS By MS/MS 2.2 0.4 4 1 3 2 70.715 66.322 2 0.0033762 64564 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.608 51.839 165210000 0 163350000 1857300 0 0 0 0 0 0 0 0 0 0 0 0 635 2155 580 5428;5429;5430;5431;5432 4394;4395;4396 4394 3 AASLELSEVKK Unmodified 1173.6605 0.66050319 2155 Q08378 GOLGA3 Golgin subfamily A member 3 yes yes 0 0 1 By MS/MS 3 0 1 1 44.197 39.391 3 0.040877 49019 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 29.341 18.128 3327300 0 3327300 0 0 0 0 0 0 0 0 0 0 0 0 0 636 2155 581 5433 4397 4397 1 AASLEYDYETIR Unmodified 1429.6725 0.67252444 3932 Q96N66 MBOAT7 Lysophospholipid acyltransferase 7 yes yes 0 0 0 By MS/MS 10 0 1 1 63.852 64.033 2 0.033531 73307 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 50.284 38.57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 637 3932 582 5434 4398 4398 1 AASLTEDRDR Unmodified 1132.5473 0.54726434 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 9.738 9.8501 2 6.979E-15 7455 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 166.09 114.23 211920000 0 0 0 6389300 12331000 13317000 20814000 12286000 12693000 8881000 0 43447000 17888000 24544000 39330000 638 2102 583 5435;5436;5437;5438;5439;5440;5441;5442;5443;5444;5445 4399;4400;4401;4402;4403 4400 4 AASLTEDRDRGR Unmodified 1345.6698 0.66983909 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.7072 7.8344 3 0.00019684 5664 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 81.625 75.148 1350500000 0 0 0 41722000 50076000 53973000 70066000 69566000 76170000 117970000 274610000 212070000 127770000 127850000 128650000 639 2102 584 5446;5447;5448;5449;5450;5451;5452;5453;5454;5455;5456;5457 4404;4405;4406;4407;4408;4409;4410;4411;4412;4413 4409 8 AASLVGK Acetyl (Protein N-term) 686.39629 0.39629 4238 Q9BY32 ITPA Inosine triphosphate pyrophosphatase yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43.922 43.269 1 0.0042433 50011 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 99.919 22.171 297110000 22280000 0 1917800 13610000 9843400 32862000 18296000 12089000 9560100 31851000 26138000 32891000 18223000 16304000 51242000 640 4238 585 5458;5459;5460;5461;5462;5463;5464;5465;5466;5467;5468;5469;5470;5471 4414;4415;4416;4417;4418;4419 4419 2 AASMDPPRATEPVATSNPAGDPVGSTR Oxidation (M) 2667.2559 0.25585671 2646 Q27J81 INF2 Inverted formin-2 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 46.475 46.674 3 3.6995E-25 52565 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 73.072 69.544 67774000 0 0 0 0 9010100 7186800 0 7694300 0 9433000 10078000 14534000 9837400 0 0 641 2646 586 5472;5473;5474;5475;5476;5477;5478 4420;4421;4422;4423;4424;4425;4426 4424 4307 7 AASMDPPRATEPVATSNPAGDPVGSTR Unmodified 2651.2609 0.26094209 2646 Q27J81 INF2 Inverted formin-2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 54.734 55.072 3 8.1205E-36 61782 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.196 80.321 58178000 0 0 0 0 0 0 4944400 0 0 9907500 7499400 11606000 7818800 6677200 9724700 642 2646 586 5479;5480;5481;5482;5483;5484;5485 4427;4428;4429;4430;4431;4432;4433;4434;4435 4430 9 AASNLRDNYR Unmodified 1178.5792 0.57923317 1270 P30101 PDIA3 Protein disulfide-isomerase A3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 2 1 1 1 2 1 1 13.959 14.171 3 0.008365 13030 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.276 29.904 411210000 0 0 0 0 0 0 25615000 35943000 9927400 0 87053000 0 35503000 52199000 164970000 643 1270 587 5486;5487;5488;5489;5490;5491;5492;5493;5494 4436;4437;4438;4439;4440;4441;4442 4436 7 AASPGSGSANPR Acetyl (Protein N-term) 1112.521 0.52104959 2975 Q6UUV7 CRTC3 CREB-regulated transcription coactivator 3 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 16.306 16.475 2 0.0038143 16460 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 44.863 18.969 33710000 0 0 0 3797200 0 3883900 0 4241800 3979600 5180500 0 0 5874400 5125300 1627700 644 2975 588 5495;5496;5497;5498;5499;5500;5501;5502 4443;4444 4444 2 AASPGSGSANPRK Acetyl (Protein N-term) 1240.616 0.61601261 2975 Q6UUV7 CRTC3 CREB-regulated transcription coactivator 3 yes yes 1 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 11.28 10.895 2 1.1094E-20 10399 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 157.66 132.1 267700000 0 18418000 0 13554000 12019000 0 21170000 19203000 19145000 25799000 21581000 31887000 26694000 21424000 36807000 645 2975 589 5503;5504;5505;5506;5507;5508;5509;5510;5511;5512;5513;5514;5515;5516 4445;4446;4447;4448;4449;4450;4451;4452;4453;4454;4455;4456;4457 4455 13 AASPLGSPELCPSALHGLSQAMK Oxidation (M) 2337.1457 0.14570132 2823 Q5VW36 FOCAD Focadhesin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 77.782 76.577 3 2.5889E-11 97307 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.847 60.252 41077000 13183000 0 0 2082900 4628900 0 0 6021300 0 8107000 0 0 2571400 4482400 0 646 2823 590 5517;5518;5519;5520;5521;5522;5523 4458;4459 4459 4459 2 AASPLGSPELCPSALHGLSQAMK Unmodified 2321.1508 0.1507867 2823 Q5VW36 FOCAD Focadhesin yes yes 0 0 0 By MS/MS 2 0 1 1 87.922 79.792 3 0.011747 103845 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 25.52 20.848 14895000 14895000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 647 2823 590 5524 4460 4460 1 AASPQDLAGGYTSSLACHR Unmodified 1960.9061 0.90612297 1676 P51948 MNAT1 CDK-activating kinase assembly factor MAT1 yes yes 0 0 0 By MS/MS 10 0 1 1 61.866 62.229 3 0.0078538 71098 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 18.353 16.372 5065200 0 0 0 0 0 0 0 0 0 0 5065200 0 0 0 0 648 1676 591 5525 4461 4461 1 AASQAVEEMR Acetyl (Protein N-term);Oxidation (M) 1148.5132 0.51318702 260 O15160 POLR1C DNA-directed RNA polymerases I and III subunit RPAC1 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 29.773 29.983 2 0.00020677 32566 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 90.15 75.615 108020000 0 0 0 8296200 5450000 0 8675800 5598900 7955700 9738300 11873000 15474000 13707000 8847700 12407000 649 260 592 5526;5527;5528;5529;5530;5531;5532;5533;5534;5535;5536 4462;4463;4464;4465;4466;4467;4468;4469 4462 347 7 AASQAVEEMR Acetyl (Protein N-term) 1132.5183 0.5182724 260 O15160 POLR1C DNA-directed RNA polymerases I and III subunit RPAC1 yes yes 1 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 53.181 53.31 2 3.0967E-06 60115 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 147.2 124.96 170810000 0 0 0 11000000 11076000 0 23212000 19117000 0 0 31620000 26648000 0 20698000 27435000 650 260 592 5537;5538;5539;5540;5541;5542;5543;5544;5545;5546 4470;4471;4472;4473;4474;4475;4476;4477 4472 8 AASQGSDSPLLPAQR Unmodified 1496.7583 0.75831975 2795 Q5TCZ1 SH3PXD2A SH3 and PX domain-containing protein 2A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 2 1 1 1 1 44.522 44.955 2 0.0013915 49416 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.998 44.618 45838000 0 0 0 0 0 0 0 0 5479500 4287100 8744700 8275600 6609600 0 12441000 651 2795 593 5547;5548;5549;5550;5551;5552;5553 4478;4479;4480;4481;4482 4479 4 AASQPTSLAPEK Unmodified 1198.6194 0.61936665 3932 Q96N66 MBOAT7 Lysophospholipid acyltransferase 7 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.437 27.635 2 0.024025 29557 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 51.762 37.644 92338000 0 0 0 5472300 6830700 7080000 10961000 7149200 6441700 6946600 10364000 11111000 7143500 7069400 5768900 652 3932 594 5554;5555;5556;5557;5558;5559;5560;5561;5562;5563;5564;5565 4483;4484 4484 2 AASQSTTDYNQVVPNR Unmodified 1749.8282 0.82819023 2776 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 40.325 40.532 2 4.8909E-06 45076 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 103.34 93.909 36472000 0 0 0 0 3242400 0 3581400 2919700 2774000 5135100 5552100 0 5132300 3330900 4803500 653 2776 595 5566;5567;5568;5569;5570;5571;5572;5573;5574 4485;4486;4487;4488;4489 4485 5 AASSELPADISK Unmodified 1187.6034 0.60338224 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.598 42.774 2 5.0263E-07 46758 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 140.49 119.11 510580000 0 0 0 36958000 44929000 27223000 42067000 41710000 27387000 38687000 52455000 63820000 37138000 34971000 63234000 654 4285 596 5575;5576;5577;5578;5579;5580;5581;5582;5583;5584;5585;5586 4490;4491;4492;4493;4494;4495;4496;4497;4498;4499;4500 4493 9 AASSKPEEIK Unmodified 1058.5608 0.56078914 412 O60563 CCNT1 Cyclin-T1 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 9.588 6.2794 2 0.01334 8863 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.21 33.945 74551000 0 74551000 0 0 0 0 0 0 0 0 0 0 0 0 0 655 412 597 5587;5588 4501;4502 4501 2 AASSLEQK Acetyl (Protein N-term) 874.43961 0.43961137 206 O14733 MAP2K7 Dual specificity mitogen-activated protein kinase kinase 7 yes yes 1 0 0 By matching By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 14 1 1 1 1 1 2 2 2 1 1 1 26.531 26.797 1;2 0.0021049 27251 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 100.19 52.339 226870000 0 0 0 14785000 16551000 0 25069000 21114000 18244000 27776000 32748000 46614000 2410900 18570000 2988600 656 206 598 5589;5590;5591;5592;5593;5594;5595;5596;5597;5598;5599;5600;5601;5602 4503;4504;4505;4506;4507 4506 4 AASSQTPTMCTTTVTVK Oxidation (M) 1798.8441 0.84409957 2160 Q08554 DSC1 Desmocollin-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 33.755 33.896 2 6.8435E-47 36663 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 157.56 143.9 91210000 0 0 0 21800000 7560700 5548500 5690600 8706000 4486100 0 0 18164000 10789000 0 8464200 657 2160 599 5603;5604;5605;5606;5607;5608;5609;5610;5611 4508;4509;4510;4511;4512;4513;4514;4515 4512 3473 8 AASSQTPTMCTTTVTVK Unmodified 1782.8492 0.84918495 2160 Q08554 DSC1 Desmocollin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.149 47.314 2 1.0981E-37 53918 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 164.48 132.15 150500000 0 0 0 26251000 9551700 12594000 8196700 7316300 6174100 15187000 15399000 15401000 17780000 9421300 7223100 658 2160 599 5612;5613;5614;5615;5616;5617;5618;5619;5620;5621;5622;5623 4516;4517;4518;4519;4520;4521;4522;4523;4524;4525;4526;4527 4526 12 AASSSGEKEK Acetyl (Protein N-term) 1034.488 0.48801813 4555 Q9NPJ6 MED4 Mediator of RNA polymerase II transcription subunit 4 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 25.761 25.987 2 0.041602 28021 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 41.029 26.164 139860000 0 0 0 6404500 10254000 0 11004000 6827300 0 20425000 19715000 17488000 13417000 18082000 16242000 659 4555 600 5624;5625;5626;5627;5628;5629;5630;5631;5632;5633 4528 4528 0 AASSSSPGSPVASSPSR Unmodified 1530.7274 0.72741355 3615 Q92538 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.171 21.376 2 3.701E-28 21739 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 122.45 113.01 95640000 0 0 0 5238800 5446000 8910000 8451100 6040200 4961300 8797900 8261200 10874000 9763300 8785300 10111000 660 3615 601 5634;5635;5636;5637;5638;5639;5640;5641;5642;5643;5644;5645 4529;4530;4531;4532;4533;4534;4535;4536;4537;4538;4539;4540 4538 12 AASSSSSSAGGVSGSSVTGSGFSVSDLAPPRK Acetyl (Protein N-term) 2925.3952 0.39518696 3794 Q96DE5 ANAPC16 Anaphase-promoting complex subunit 16 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 78.041 78.147 3 1.2719E-126 90345 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 134.67 132.13 126180000 0 0 0 0 7988300 8341100 6037800 9679600 3479900 17695000 17635000 15767000 6183300 10573000 22799000 661 3794 602 5646;5647;5648;5649;5650;5651;5652;5653;5654;5655;5656 4541;4542;4543;4544;4545;4546;4547;4548;4549;4550 4545 10 AASSSSVVPYLPR Unmodified 1332.7038 0.70376498 1462 P42684 ABL2 Abelson tyrosine-protein kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.655 68.734 2 0.002012 78943 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 73.067 58.393 173440000 0 0 0 8955200 9542900 12359000 11151000 11329000 11261000 13497000 20849000 18495000 13469000 17362000 25170000 662 1462 603 5657;5658;5659;5660;5661;5662;5663;5664;5665;5666;5667;5668 4551;4552;4553;4554;4555;4556;4557;4558;4559;4560;4561;4562;4563;4564;4565 4553 14 AASTAPSSTSTPAASSAGLIYIDPSNLR Unmodified 2705.3508 0.35080295 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 2 1 1 1 1 1 83.986 84.053 3 1.9025E-50 97348 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 100.88 94.23 197350000 0 0 0 4792900 10415000 18687000 10641000 14398000 10710000 34414000 21285000 21382000 10581000 10915000 29125000 663 619 604 5669;5670;5671;5672;5673;5674;5675;5676;5677;5678;5679;5680;5681 4566;4567;4568;4569;4570;4571;4572;4573;4574;4575;4576 4566 11 AASTASHRPIK Acetyl (Protein N-term) 1179.636 0.63601977 1437 P41236;Q6NXS1 PPP1R2;PPP1R2P3 Protein phosphatase inhibitor 2;Protein phosphatase inhibitor 2-like protein 3 yes no 1 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.88 3.49 6 1 19 3 2 2 1 2 1 2 1 2 1 2 1 2 2 2 15.204 14.364 2;3 4.3806E-117 21173 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 244.8 219.66 5322200000 3924900000 202630000 178380000 4357200 54465000 2977000 29267000 4043400 23068000 8178700 209330000 27933000 57385000 167290000 428020000 664 1437 605 5682;5683;5684;5685;5686;5687;5688;5689;5690;5691;5692;5693;5694;5695;5696;5697;5698;5699;5700;5701;5702;5703;5704;5705;5706;5707 4577;4578;4579;4580;4581;4582;4583;4584;4585;4586;4587;4588;4589;4590;4591;4592;4593;4594;4595;4596;4597 4587 14 AASTDLGAGETVVGK Unmodified 1374.6991 0.69907354 2482 Q15032 R3HDM1 R3H domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 43.939 44.021 2 0.0013025 48263 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 65.842 54.352 58699000 0 0 0 6732300 4926600 7151400 0 0 6745900 7636900 0 0 9682300 5860700 9963000 665 2482 606 5708;5709;5710;5711;5712;5713;5714;5715 4598;4599;4600;4601;4602;4603;4604;4605 4603 8 AASVAAATTSPTPR Unmodified 1299.6783 0.67827852 5098 Q9Y2D9 ZNF652 Zinc finger protein 652 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 28.171 28.234 2 7.5548E-19 30429 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 125.72 106.63 38693000 0 0 0 4282500 4098800 2455000 4840200 5173900 3777500 5737100 0 0 0 0 8327600 666 5098 607 5716;5717;5718;5719;5720;5721;5722;5723;5724 4606;4607;4608;4609;4610;4611;4612;4613;4614;4615 4608 9 AASVHTVGEDTEETPHR Unmodified 1834.8446 0.84456858 4026 Q99575 POP1 Ribonucleases P/MRP protein subunit POP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 2 2 2 1 1 2 1 2 1 2 2 21.603 21.81 3;4 0.00024951 22115 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 45.813 38.404 193250000 0 0 0 8220000 8893500 27614000 16898000 11963000 8606800 17596000 10190000 27348000 19062000 17436000 19425000 667 4026 608 5725;5726;5727;5728;5729;5730;5731;5732;5733;5734;5735;5736;5737;5738;5739;5740;5741;5742;5743 4616;4617;4618;4619;4620;4621 4621 6 AASVIPGSTSR Unmodified 1044.5564 0.55637247 3352 Q8N5S9 CAMKK1 Calcium/calmodulin-dependent protein kinase kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 29.733 29.954 2 0.021404 31201 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 42.311 16.737 89601000 0 0 0 0 5575100 8611200 0 6135100 5249000 8388600 0 33443000 0 5074000 17125000 668 3352 609 5744;5745;5746;5747;5748;5749;5750;5751 4622;4623;4624 4623 3 AASVVQPQPLVVVK Unmodified 1433.8606 0.86059998 441 O60885 BRD4 Bromodomain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.48 71.551 2 0.00038278 82168 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 93.111 85.465 239920000 0 0 0 12332000 13976000 16320000 20028000 15258000 12907000 22354000 20356000 25718000 18558000 22266000 39849000 669 441 610 5752;5753;5754;5755;5756;5757;5758;5759;5760;5761;5762;5763 4625;4626;4627;4628;4629;4630;4631;4632;4633;4634;4635;4636 4631 12 AASYTEEDENHTAK Unmodified 1564.6641 0.66414459 2369 Q14126 DSG2 Desmoglein-2 yes yes 0 0 0 By MS/MS 2.5 0.5 2 2 4 13.29 9.9314 2;3 2.1534E-14 13415 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.25 111.38 48859000 0 48859000 0 0 0 0 0 0 0 0 0 0 0 0 0 670 2369 611 5764;5765;5766;5767 4637;4638;4639 4637 3 AATAAADFTAK Unmodified 1036.5189 0.51892433 5167 Q9Y3F4 STRAP Serine-threonine kinase receptor-associated protein yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 5 3.91 1 3 1 3 2 2 1 1 1 1 41.526 40.072 2 9.8219E-05 93753 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 112.71 77.462 2538100000 110080000 2237000000 9212100 0 0 0 0 0 0 0 43186000 54207000 0 0 84418000 671 5167 612 5768;5769;5770;5771;5772;5773;5774;5775 4640;4641;4642;4643;4644;4645;4646;4647 4644 7 AATAGPPNAR Unmodified 924.47773 0.47772821 5059 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 2 1 1 1 1 1 1 2 1 1 1 9.8361 9.9538 2 0.010707 9155 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 55.531 25.345 47204000 0 0 0 2081600 3012400 3130400 3590100 2695500 2314400 3430200 4049400 7709400 4519100 4193100 6478400 672 5059 613 5776;5777;5778;5779;5780;5781;5782;5783;5784;5785;5786;5787;5788;5789 4648;4649;4650;4651;4652;4653;4654;4655;4656 4648 8 AATASAGAGGIDGKPR Acetyl (Protein N-term) 1440.7321 0.732105 2085 Q02978 SLC25A11 Mitochondrial 2-oxoglutarate/malate carrier protein yes yes 1 0 1 By MS/MS By matching By matching 10 0 3 1 1 1 33.181 33.526 2 7.4754E-21 37093 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 131.43 104.32 10117000 0 0 0 3085900 0 0 0 0 0 0 0 4890500 0 0 2140900 673 2085 614 5790;5791;5792 4657 4657 1 AATDGADTPFGR Unmodified 1177.5364 0.53636531 3542 Q8WUF5 PPP1R13L RelA-associated inhibitor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.564 36.745 2 1.9205E-08 39449 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 135.55 124.19 581910000 0 0 0 35902000 34933000 39992000 52833000 35856000 38933000 50299000 50557000 68482000 53585000 45457000 75077000 674 3542 615 5793;5794;5795;5796;5797;5798;5799;5800;5801;5802;5803;5804 4658;4659;4660;4661;4662;4663;4664;4665;4666;4667;4668;4669;4670 4662 13 AATDGADTPFGRSESAPTLHPYSPLSPK Unmodified 2869.3883 0.38825109 3542 Q8WUF5 PPP1R13L RelA-associated inhibitor yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 3 6 2 1 1 1 1 1 1 1 75.323 73.363 3;4 3.9597E-90 94363 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 134.91 122.36 204210000 108540000 0 4835400 0 0 0 15800000 0 19811000 0 16985000 10543000 9076100 0 18618000 675 3542 616 5805;5806;5807;5808;5809;5810;5811;5812;5813 4671;4672;4673;4674;4675;4676;4677;4678;4679 4675 8 AATENIPVVR Unmodified 1068.5928 0.59275797 2916 Q6P1J9 CDC73 Parafibromin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 45.753 45.923 2 0.0010726 51204 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 110.12 78.886 561640000 0 0 0 23855000 30270000 29352000 34359000 32256000 29990000 0 63361000 80106000 76821000 74719000 86553000 676 2916 617 5814;5815;5816;5817;5818;5819;5820;5821;5822;5823;5824 4680;4681;4682;4683;4684;4685;4686;4687;4688;4689;4690;4691;4692;4693;4694;4695 4685 16 AATEPILAATGSPAAVPPEK Acetyl (Protein N-term) 1932.0204 0.020407676 1792 P57086 SCAND1 SCAN domain-containing protein 1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 83.307 83.152 2 6.4792E-08 96134 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 91.914 86.53 9740800 0 0 0 2592000 4347200 0 2801600 0 0 0 0 0 0 0 0 677 1792 618 5825;5826;5827 4696;4697 4696 0 AATFFGCIGIDK Unmodified 1298.6329 0.63290823 1765 P55263 ADK Adenosine kinase yes yes 0 0 0 By MS/MS 2 0 1 1 87.131 79.001 2 0.0040865 102880 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.488 54.266 18206000 18206000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 678 1765 619 5828 4698 4698 1 AATFFGEVVK Acetyl (Protein N-term) 1109.5757 0.57571092 663 O95456 PSMG1 Proteasome assembly chaperone 1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.45 3.94 1 6 2 11 2 5 2 1 1 1 1 1 1 1 1 1 1 1 93.791 92.759 1;2 3.176E-23 112382 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 211.02 160.89 3050900000 149860000 2628500000 19234000 9236900 13161000 26912000 15378000 16272000 11742000 34005000 28338000 28576000 0 18845000 50846000 679 663 620 5829;5830;5831;5832;5833;5834;5835;5836;5837;5838;5839;5840;5841;5842;5843;5844;5845;5846;5847;5848 4699;4700;4701;4702;4703;4704;4705;4706;4707;4708;4709;4710;4711;4712;4713;4714;4715;4716;4717;4718;4719;4720;4721;4722;4723;4724;4725 4706 26 AATGEEVPR Unmodified 928.46141 0.46140945 271 O15294 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.186 15.357 2 0.0030604 14427 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 91.853 39.17 343840000 0 0 0 16472000 13986000 16871000 27295000 20486000 0 28600000 38992000 41107000 43957000 43899000 52169000 680 271 621 5849;5850;5851;5852;5853;5854;5855;5856;5857;5858;5859;5860 4726;4727;4728;4729;4730;4731;4732;4733;4734;4735;4736;4737 4730 11 AATGEEVSAEDLGGADLHCRK Unmodified 2185.007 0.0069592315 4509 Q9HCC0 MCCC2 Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial yes yes 0 0 1 By MS/MS 2 0 2 2 50.305 46.39 3;4 0.0020277 58285 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 39.905 33.131 16310000 0 0 16310000 0 0 0 0 0 0 0 0 0 0 0 0 681 4509 622 5861;5862 4738;4739 4738 1 AATLAQELEK Unmodified 1072.5764 0.57643921 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 0 By MS/MS By matching By MS/MS 2 0 3 1 1 1 39.002 33.995 2 0.038751 46893 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.531 19.135 495170000 19281000 473890000 1999000 0 0 0 0 0 0 0 0 0 0 0 0 682 2431 623 5863;5864;5865 4740 4740 1 AATLMMLGR Oxidation (M) 978.49906 0.49905728 4035 Q99615 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 2 2 2 1 1 1 1 1 1 1 53.814 53.947 2 0.0072443 60602 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 63.48 47.186 180110000 0 0 0 8236800 8504500 18159000 19958000 8729300 6274200 15253000 19936000 18433000 11860000 16257000 28509000 683 4035 624 5866;5867;5868;5869;5870;5871;5872;5873;5874;5875;5876;5877;5878;5879;5880 4741;4742;4743;4744;4745;4746;4747;4748;4749;4750 4745 5538;5539 9 AATLMMLGR Unmodified 962.50414 0.50414266 4035 Q99615 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.196 67.281 2 0.021923 76887 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 51.854 26.932 97069000 0 0 0 4145500 4101800 6164400 5299200 6949200 4964500 5799600 9208900 8541400 5129200 8506800 28258000 684 4035 624 5881;5882;5883;5884;5885;5886;5887;5888;5889;5890;5891;5892 4751;4752;4753 4753 3 AATLMMLGR 2 Oxidation (M) 994.49397 0.49397191 4035 Q99615 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 0 2 0 By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 2 1 36.681 36.811 2 0.0032231 40203 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 65.252 38.868 441340000 0 0 0 0 4038400 0 0 0 45779000 0 0 0 266200000 125320000 0 685 4035 624 5893;5894;5895;5896;5897 4754;4755;4756 4755 5538;5539 2 AATMEIPIHGNGEAR Unmodified 1565.762 0.76202492 1711 P53365 ARFIP2 Arfaptin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 49.852 50.038 3 0.001568 56616 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 47.545 40.343 65739000 0 0 0 6402600 0 8976900 0 0 0 0 17623000 0 8407000 6572600 17757000 686 1711 625 5898;5899;5900;5901;5902;5903 4757;4758;4759;4760;4761;4762 4762 6 AATMSAVEAATCR Oxidation (M) 1353.6017 0.60168445 2705 Q53H96 PYCRL Pyrroline-5-carboxylate reductase 3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 3 2 1 2 2 2 1 1 28.282 28.382 2 2.7561E-08 30758 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 104.82 72.89 94666000 0 0 0 4041000 12737000 7357100 14889000 7660500 6975500 7853500 10450000 14459000 5360900 2883000 0 687 2705 626 5904;5905;5906;5907;5908;5909;5910;5911;5912;5913;5914;5915;5916;5917;5918;5919;5920;5921;5922;5923;5924;5925 4763;4764;4765;4766;4767;4768;4769;4770;4771;4772;4773;4774;4775;4776;4777;4778;4779;4780;4781;4782 4766 4356 19 AATMSAVEAATCR Unmodified 1337.6068 0.60676983 2705 Q53H96 PYCRL Pyrroline-5-carboxylate reductase 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 44.798 44.969 2 7.5427E-13 50239 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 133.81 99.555 192650000 0 0 0 9493900 11201000 17359000 12863000 26555000 15645000 13514000 22635000 25823000 7612400 14823000 15128000 688 2705 626 5926;5927;5928;5929;5930;5931;5932;5933;5934;5935;5936;5937 4783;4784;4785;4786;4787;4788;4789;4790;4791;4792;4793;4794;4795;4796 4787 14 AATNHVTPEEK Unmodified 1195.5833 0.5833155 4829 Q9P2W1 PSMC3IP Homologous-pairing protein 2 homolog yes yes 0 0 0 By MS/MS 2.5 0.5 2 2 4 9.5078 6.1992 2;3 0.00046908 8891 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.88 68.038 92323000 0 92323000 0 0 0 0 0 0 0 0 0 0 0 0 0 689 4829 627 5938;5939;5940;5941 4797;4798 4797 2 AATPTVVSATSLVPTPNPISGK Unmodified 2107.1525 0.15248448 5000 Q9ULM3 YEATS2 YEATS domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 15 1 2 2 1 1 2 2 2 1 1 83.762 83.81 2;3 7.5415E-08 97006 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 82.55 77.396 117840000 0 0 0 1761100 12025000 17196000 6398200 5392100 0 20999000 16295000 22860000 0 5149500 9761800 690 5000 628 5942;5943;5944;5945;5946;5947;5948;5949;5950;5951;5952;5953;5954;5955;5956 4799;4800;4801;4802;4803;4804;4805;4806 4799 8 AATQCEFSK Unmodified 1040.4597 0.45969489 3854 Q96GG9 DCUN1D1 DCN1-like protein 1 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 14.77 15.264 2 0.0089939 14093 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.016 51.461 8142100 0 0 0 0 0 0 0 0 0 0 2428600 0 0 0 5713500 691 3854 629 5957;5958 4807 4807 1 AATSDLEHYDK Unmodified 1248.5622 0.5622457 1992 P80303 NUCB2 Nucleobindin-2;Nesfatin-1 yes yes 0 0 0 By matching By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 29.792 24.808 2;3 0.0076214 32884 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.781 61.205 194460000 7328200 187130000 0 0 0 0 0 0 0 0 0 0 0 0 0 692 1992 630 5959;5960;5961 4808;4809 4808 1 AATSPALFNR Unmodified 1046.5509 0.55089316 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 46.022 46.396 2 0.0091038 51251 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 58.426 30.544 34255000 0 0 0 0 0 0 0 6531700 0 0 0 10887000 9531000 7305700 0 693 2392 631 5962;5963;5964;5965 4810 4810 1 AATTANPEMTSDVPSLGPAIASGNSGPGIQGGGAIVQR Acetyl (Protein N-term);Oxidation (M) 3606.7584 0.75840269 1219 P27540 ARNT Aryl hydrocarbon receptor nuclear translocator yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 2 1 1 2 85.778 85.884 3;4 6.1295E-41 99352 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 61.555 59.83 63479000 0 0 0 0 6179900 0 0 6851500 0 15602000 8729300 5894300 0 0 20222000 694 1219 632 5966;5967;5968;5969;5970;5971;5972;5973 4811;4812;4813;4814;4815;4816;4817;4818 4818 1790 8 AATTATPAATTSPK Unmodified 1287.667 0.66704513 3657 Q92766 RREB1 Ras-responsive element-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 17.833 18.021 2 3.2156E-16 18566 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 118.9 97.219 138740000 0 0 0 9790100 8932200 11490000 9289000 11394000 8836100 10278000 10888000 18174000 11676000 11706000 16290000 695 3657 633 5974;5975;5976;5977;5978;5979;5980;5981;5982;5983;5984;5985 4819;4820;4821;4822;4823;4824;4825;4826;4827;4828;4829;4830;4831;4832;4833;4834;4835 4819 17 AATTEPTEVEEVVPALEPTETLLSEK Unmodified 2782.4012 0.40116677 4228 Q9BXK5 BCL2L13 Bcl-2-like protein 13 yes yes 0 0 0 By MS/MS 3 0 1 1 94.38 91.141 3 0.011785 109187 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 23.675 20.742 3265200 0 3265200 0 0 0 0 0 0 0 0 0 0 0 0 0 696 4228 634 5986 4836 4836 1 AATTGSGVK Acetyl (Protein N-term) 832.42905 0.42904669 2279 Q13404 UBE2V1 Ubiquitin-conjugating enzyme E2 variant 1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 13.738 13.9 2 0.0035751 7037 211201_C21_010_OE480_Thermo_Rev00_#21_059_input_rep1 81.296 48.367 78093000 6142500 5431100 4595200 0 1527800 7707700 4941100 5928000 0 5910400 7686100 6526800 4310300 5122300 12263000 697 2279 635 5987;5988;5989;5990;5991;5992;5993;5994;5995;5996;5997;5998;5999 4837;4838;4839;4840;4841 4838 5 AATVGYGILR Unmodified 1019.5764 0.57637963 3044 Q7L266 ASRGL1 Isoaspartyl peptidase/L-asparaginase;Isoaspartyl peptidase/L-asparaginase alpha chain;Isoaspartyl peptidase/L-asparaginase beta chain yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 60.379 60.571 2 0.031837 68327 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 42.599 20.917 6266600 0 0 0 0 0 0 0 0 0 0 0 0 3139200 3127500 0 698 3044 636 6000;6001 4842 4842 1 AATVHLMQ Unmodified 869.44292 0.44292261 2753 Q5R3I4 TTC38 Tetratricopeptide repeat protein 38 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 43.347 37.34 2 0.0042729 51339 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 173.59 110.44 215790000 37192000 178590000 0 0 0 0 0 0 0 0 0 0 0 0 0 699 2753 637 6002;6003 4843;4844;4845 4845 3 AATVNLELDPIFLK Acetyl (Protein N-term) 1584.8763 0.87630962 3775 Q96CB8 INTS12 Integrator complex subunit 12 yes yes 1 0 0 By MS/MS 2.5 0.5 1 1 2 99.564 95.532 2 1.4562E-39 117709 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 194.17 141.38 98683000 0 98683000 0 0 0 0 0 0 0 0 0 0 0 0 0 700 3775 638 6004;6005 4846;4847 4846 2 AAVAGEDGR Unmodified 844.40389 0.40389457 851 P07910;P0DMR1;O60812;B7ZW38;B2RXH8 HNRNPC;HNRNPCL4;HNRNPCL1;HNRNPCL3;HNRNPCL2 Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 2 yes no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 6.3947 6.4935 2 0.020914 4573 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 52.716 28.744 37650000 0 0 0 2238000 3519700 6540800 4514300 4827500 4429700 1493200 0 3226700 0 2393400 4466900 701 851 639 6006;6007;6008;6009;6010;6011;6012;6013;6014;6015 4848;4849;4850;4851 4849 4 AAVATCGSVAASTGSAVATASK Acetyl (Protein N-term) 1978.963 0.96296915 3807 Q96EB1 ELP4 Elongator complex protein 4 yes yes 1 0 0 By MS/MS 1 0 1 1 100.83 106.1 2 0.0015652 85581 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 60.401 54.429 2778600 2778600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 702 3807 640 6016 4852 4852 1 AAVATFLQSVQVPEFTPK Unmodified 1932.0357 0.03566381 1137 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 5 2 1 2 92.845 92.987 2;3 7.8066E-20 107741 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 126.1 118.19 39176000 0 0 0 0 0 0 0 0 0 8204800 2661000 0 0 0 28310000 703 1137 641 6017;6018;6019;6020;6021 4853;4854;4855;4856 4854 3 AAVAVAVREDSGSGMK Acetyl (Protein N-term);Oxidation (M) 1604.7828 0.78281994 4916 Q9UI10 EIF2B4 Translation initiation factor eIF-2B subunit delta yes yes 1 1 1 By MS/MS By MS/MS 2 0 2 1 1 63.215 58.38 2 3.7329E-21 72612 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 127.56 105.53 45182000 0 29768000 15414000 0 0 0 0 0 0 0 0 0 0 0 0 704 4916 642 6022;6023 4857;4858;4859 4859 6274 2 AAVAVAVREDSGSGMK Acetyl (Protein N-term) 1588.7879 0.78790532 4916 Q9UI10 EIF2B4 Translation initiation factor eIF-2B subunit delta yes yes 1 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 72.016 67.468 2 1.044E-58 85584 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 178.15 149.97 68654000 0 61922000 6731400 0 0 0 0 0 0 0 0 0 0 0 0 705 4916 642 6024;6025;6026 4860;4861;4862 4860 3 AAVAVVPLVSEDK Unmodified 1296.7289 0.7289171 464 O75152 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.973 72.042 2 5.6175E-08 82845 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 101.95 70.46 431010000 0 0 0 20572000 26317000 34755000 34693000 27700000 25115000 36366000 46246000 53028000 36519000 34700000 54996000 706 464 643 6027;6028;6029;6030;6031;6032;6033;6034;6035;6036;6037;6038 4863;4864;4865;4866;4867;4868;4869;4870;4871;4872;4873;4874 4868 12 AAVAWANQNR Unmodified 1099.5523 0.55229014 3835 Q96F86 EDC3 Enhancer of mRNA-decapping protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.015 32.202 2 0.0089012 35192 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 58.917 46.561 71618000 0 0 0 3868800 5203700 4854800 3742600 5290800 3976000 5605700 7967300 8707600 6595400 4680000 11125000 707 3835 644 6039;6040;6041;6042;6043;6044;6045;6046;6047;6048;6049;6050 4875;4876;4877;4878;4879;4880;4881;4882;4883 4879 9 AAVAWEAGK Unmodified 901.46577 0.46576654 955 P11766 ADH5 Alcohol dehydrogenase class-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.17 3.85 2 1 3 2 1 1 1 1 35.204 33.364 2 0.0072815 43080 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.374 34.393 795750000 0 734820000 19551000 0 0 0 0 0 0 0 11394000 7289300 0 0 22699000 708 955 645 6051;6052;6053;6054;6055;6056 4884;4885;4886;4887;4888;4889;4890;4891 4884 8 AAVAWEAGKPLSIEEIEVAPPK Unmodified 2304.2365 0.23654846 955 P11766 ADH5 Alcohol dehydrogenase class-3 yes yes 0 0 1 By MS/MS By matching By MS/MS 2 0 3 1 1 1 88.968 85.303 3 3.1103E-07 106807 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 41.257 34.409 24441000 0 14531000 9910400 0 0 0 0 0 0 0 0 0 0 0 0 709 955 646 6057;6058;6059 4892;4893 4892 2 AAVDAGFVPNDMQVGQTGK Unmodified 1903.9098 0.90981137 988 P13804 ETFA Electron transfer flavoprotein subunit alpha, mitochondrial yes yes 0 0 0 By MS/MS 10 0 1 1 71.846 72.249 2 0.0019699 82607 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.76 48.884 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 710 988 647 6060 4894 4894 1 AAVDGLSK Unmodified 759.41267 0.41266834 2244 Q13155 AIMP2 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 6 1 1 1 1 1 1 17.279 17.316 2 0.032702 17356 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 54.157 20.607 84557000 0 0 0 10069000 11148000 0 15664000 11612000 12783000 0 0 0 0 23280000 0 711 2244 648 6061;6062;6063;6064;6065;6066 4895 4895 1 AAVDLEK Acetyl (Protein N-term) 786.41233 0.41233399 1063 P17858 PFKL ATP-dependent 6-phosphofructokinase, liver type yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.64 1.76 1 24 1 2 2 2 2 2 2 2 2 2 2 2 2 46.744 47.12 1;2 0.0068869 50243 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 69.176 18.544 1095000000 50906000 0 0 64468000 53100000 78306000 62890000 64457000 58423000 94392000 94004000 149090000 98343000 74809000 151780000 712 1063 649 6067;6068;6069;6070;6071;6072;6073;6074;6075;6076;6077;6078;6079;6080;6081;6082;6083;6084;6085;6086;6087;6088;6089;6090;6091 4896;4897;4898;4899;4900;4901;4902;4903;4904;4905;4906;4907;4908;4909;4910;4911;4912 4896 17 AAVDSDVESLPR Acetyl (Protein N-term) 1299.6307 0.63065962 4415 Q9H6E5 TUT1 Speckle targeted PIP5K1A-regulated poly(A) polymerase yes yes 1 0 0 By MS/MS 10 0 1 1 69.698 69.666 2 0.0064574 80198 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 40.715 29.495 3555400 0 0 0 0 0 3555400 0 0 0 0 0 0 0 0 0 713 4415 650 6092 4913 4913 1 AAVEALQSQALHATSQQPLRK Unmodified 2246.2131 0.21312768 3634 Q92599 SEPT8 Septin-8 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 59.287 59.738 3 0.044314 67964 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 25.207 19.236 8086200 0 0 0 0 0 0 0 0 0 0 4380600 3705600 0 0 0 714 3634 651 6093;6094 4914 4914 0 AAVEDSGTTVETIK Unmodified 1419.7093 0.70930387 2816 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.059 39.239 2 2.5913E-19 43749 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 135.99 121.49 569120000 0 0 0 30427000 25132000 41092000 38678000 44497000 31631000 48642000 53667000 68183000 53867000 43948000 89356000 715 2816 652 6095;6096;6097;6098;6099;6100;6101;6102;6103;6104;6105;6106 4915;4916;4917;4918;4919;4920;4921;4922;4923;4924;4925 4915 11 AAVEEGIVLGGGCALLR Unmodified 1683.8978 0.89779012 930 P10809 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 2 1 1 2 1 1 83.63 83.733 2;3 3.0951E-18 97097 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 117.94 73.75 60913000 0 0 0 0 1652600 3572700 0 0 12766000 6487000 8032800 10670000 0 7020700 10712000 716 930 653 6107;6108;6109;6110;6111;6112;6113;6114;6115;6116 4926;4927;4928;4929;4930;4931;4932;4933;4934 4933 8 AAVELEEPEDAR Unmodified 1327.6256 0.62557424 601 O94906 PRPF6 Pre-mRNA-processing factor 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 44.197 44.453 2 6.4487E-08 49958 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 136.33 116 251410000 0 0 0 0 19162000 17287000 0 22976000 20719000 24273000 24152000 30154000 29317000 26844000 36527000 717 601 654 6117;6118;6119;6120;6121;6122;6123;6124;6125;6126 4935;4936;4937;4938;4939;4940;4941 4936 7 AAVENLPTFLVELSR Unmodified 1657.9039 0.90392136 2457 Q14974 KPNB1 Importin subunit beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 4 1 1 2 96.471 96.625 2;3 0.0012462 112129 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.519 47.861 22244000 0 0 0 0 0 0 0 0 0 5136700 2971300 0 0 0 14136000 718 2457 655 6127;6128;6129;6130 4942;4943;4944;4945;4946 4943 5 AAVESLGFILFR Unmodified 1321.7394 0.73942221 4011 Q99460 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 95.38 95.522 2 0.00072638 111156 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 75.378 33.269 4486000 0 0 0 0 0 0 0 0 0 1436100 1020100 800270 0 0 1229500 719 4011 656 6131;6132;6133;6134 4947;4948;4949 4947 3 AAVETRVCETDGCSSEAK Acetyl (Protein N-term) 2010.8623 0.86226883 1715 P53582 METAP1 Methionine aminopeptidase 1 yes yes 1 0 1 By MS/MS 2.5 0.5 1 1 2 47.484 42.265 2 3.1869E-81 54801 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 190.57 170.83 70280000 0 70280000 0 0 0 0 0 0 0 0 0 0 0 0 0 720 1715 657 6135;6136 4950 4950 1 AAVETSFLDYGENLVQK Unmodified 1882.9313 0.93125832 2426 Q14674 ESPL1 Separin yes yes 0 0 0 By MS/MS 2 0 2 2 90.773 85.876 2;3 8.8109E-26 106717 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 156.36 131.51 47897000 0 47897000 0 0 0 0 0 0 0 0 0 0 0 0 0 721 2426 658 6137;6138 4951;4952 4951 2 AAVEWFDGK Unmodified 1021.4869 0.48689592 2065 Q01844 EWSR1 RNA-binding protein EWS yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.29 2.21 1 1 19 2 1 2 2 3 2 2 1 1 1 1 1 2 62.292 61.877 2 0.0048191 70507 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 117.04 34.583 1312000000 0 222090000 0 39549000 49675000 74164000 116190000 85006000 73987000 87817000 106340000 155910000 108440000 73456000 119340000 722 2065 659 6139;6140;6141;6142;6143;6144;6145;6146;6147;6148;6149;6150;6151;6152;6153;6154;6155;6156;6157;6158;6159 4953;4954;4955;4956;4957;4958;4959;4960;4961;4962;4963;4964;4965;4966;4967;4968 4966 11 AAVFEEEDFQSMTYGFK Oxidation (M) 2013.8666 0.86660915 2831 Q5VZE5 NAA35 N-alpha-acetyltransferase 35, NatC auxiliary subunit yes yes 0 1 0 By MS/MS By matching By matching 10 0 3 1 1 1 79.566 79.717 2 0.0003678 92150 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 57.175 39.58 13541000 0 0 0 0 0 0 0 0 0 4683200 3400300 5457200 0 0 0 723 2831 660 6160;6161;6162 4969 4969 4477 1 AAVFEEIDTYERR Unmodified 1597.7736 0.77363546 3835 Q96F86 EDC3 Enhancer of mRNA-decapping protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 67.349 67.591 3 0.00020619 76748 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.997 63.239 42586000 0 0 0 0 0 6973500 0 0 4286300 0 4989300 5963600 4488000 3592900 12293000 724 3835 661 6163;6164;6165;6166;6167;6168;6169 4970;4971 4971 2 AAVGQESPGGLEAGNAK Unmodified 1554.7638 0.76379906 2647 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 2 1 1 1 1 1 1 1 33.893 34.171 2 4.695E-08 37804 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 76.655 53.05 39680000 0 0 0 0 2809100 4812500 0 0 0 5435700 9366000 8310500 0 3929800 5016100 725 2647 662 6170;6171;6172;6173;6174;6175;6176;6177;6178 4972;4973;4974;4975;4976 4976 5 AAVGSGGYARNDAGEK Acetyl (Protein N-term) 1563.7277 0.7277479 321 O43379 WDR62 WD repeat-containing protein 62 yes yes 1 0 1 By MS/MS 2 0 1 1 31.319 26.866 2 4.8949E-08 34966 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.26 92.449 26725000 0 26725000 0 0 0 0 0 0 0 0 0 0 0 0 0 726 321 663 6179 4977 4977 1 AAVHLEGK Unmodified 823.4552 0.45520186 1073 P18206 VCL Vinculin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.29 4.1 1 3 3 2 1 1 1 1 1 26.631 26.071 2 0.012113 95142 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 101.28 58.566 915980000 299170000 261680000 340530000 2802700 0 0 0 0 0 0 0 3346200 0 0 8461700 727 1073 664 6180;6181;6182;6183;6184;6185;6186 4978;4979;4980 4979 2 AAVHTYGIASVPNQPLK Unmodified 1764.9523 0.95226853 4902 Q9UHI6 DDX20 Probable ATP-dependent RNA helicase DDX20 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.24 2 1 10 1 1 1 1 1 1 1 1 1 1 1 1 1 62.851 61.63 3 0.00028851 76301 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 63.128 56.547 155500000 39977000 7148200 8511400 5355000 6521700 9885600 5754400 0 7983700 13795000 12013000 13972000 0 10639000 13942000 728 4902 665 6187;6188;6189;6190;6191;6192;6193;6194;6195;6196;6197;6198;6199 4981;4982;4983;4984;4985;4986;4987;4988;4989;4990;4991;4992;4993;4994;4995;4996;4997 4988 17 AAVLGENGR Unmodified 885.46683 0.46682918 4972 Q9UKM9 RALY RNA-binding protein Raly yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 17.506 17.479 2 0.026405 17773 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 49.833 30.878 22259000 0 0 0 0 4816200 5255000 5714000 0 0 6473400 0 0 0 0 0 729 4972 666 6200;6201;6202;6203 4998 4998 1 AAVLIFANK Unmodified 945.56475 0.56475231 3906 Q96KC2 ARL5B ADP-ribosylation factor-like protein 5B yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 67.417 67.382 2 0.0075471 77143 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 72.138 13.157 10749000 0 0 0 3310800 0 0 4986700 0 0 0 0 2451500 0 0 0 730 3906 667 6204;6205;6206 4999 4999 1 AAVLLEQER Unmodified 1027.5662 0.56620887 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 40.702 40.883 2 0.0078297 46252 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 71.379 25.364 36795000 0 0 0 0 9512600 0 0 0 0 0 0 16816000 0 10466000 0 731 2290 668 6207;6208;6209 5000;5001 5001 2 AAVLLEQERQQEIAK Unmodified 1724.9421 0.94209778 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.678 47.841 3 0.001073 52768 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.806 33.867 139640000 0 0 0 4960100 8732100 10206000 10315000 10174000 9956800 18268000 12700000 19764000 13275000 11595000 9692700 732 2290 669 6210;6211;6212;6213;6214;6215;6216;6217;6218;6219;6220;6221 5002;5003;5004;5005;5006;5007;5008;5009;5010;5011 5004 10 AAVLNAER Acetyl (Protein N-term) 884.47158 0.4715802 4382 Q9H3P7 ACBD3 Golgi resident protein GCP60 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 55.158 55.244 2 0.0042105 62700 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 73.26 34.468 191020000 0 0 0 10931000 8960300 24022000 13233000 11708000 9682100 18456000 29045000 27543000 17650000 19793000 0 733 4382 670 6222;6223;6224;6225;6226;6227;6228;6229;6230;6231;6232 5012;5013;5014;5015;5016;5017;5018;5019 5014 8 AAVLQQVLER Acetyl (Protein N-term) 1167.6612 0.66117189 965 P12270 TPR Nucleoprotein TPR yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 97.026 97.107 2 1.3489E-23 112953 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 180.44 150.18 446570000 0 0 0 4801700 21335000 18071000 17592000 17517000 18817000 78684000 51765000 45296000 19593000 41906000 111200000 734 965 671 6233;6234;6235;6236;6237;6238;6239;6240;6241;6242;6243;6244 5020;5021;5022;5023;5024;5025;5026;5027;5028;5029;5030;5031;5032 5021 13 AAVLQQVLERTELNK Acetyl (Protein N-term) 1752.9734 0.9733979 965 P12270 TPR Nucleoprotein TPR yes yes 1 0 1 By MS/MS By MS/MS 6 4 1 1 1 1 99.272 95.289 2 0.00011945 119322 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.477 83.419 6768300 5280200 0 0 0 0 0 0 0 0 0 0 0 0 0 1488100 735 965 672 6245;6246 5033;5034 5034 2 AAVMVHQLSK Unmodified 1082.5906 0.59064948 1341 P35222 CTNNB1 Catenin beta-1 yes yes 0 0 0 By MS/MS 2 0 1 1 36.49 30.061 2 0.02329 41951 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.582 46.428 7429900 7429900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 736 1341 673 6247 5035 5035 1 AAVMVYDDANK Oxidation (M) 1211.5492 0.54923818 3371 Q8N8S7 ENAH Protein enabled homolog yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.31 3.1 1 2 10 1 2 1 1 1 1 1 1 1 1 1 1 30.182 29.195 2 0.00031002 30937 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 84.213 69.543 150360000 139870 25897000 0 11868000 8723600 10417000 10165000 9236700 10481000 14700000 16779000 17730000 0 14227000 0 737 3371 674 6248;6249;6250;6251;6252;6253;6254;6255;6256;6257;6258;6259;6260 5036;5037;5038;5039;5040;5041;5042;5043;5044;5045;5046;5047 5043 4945 11 AAVMVYDDANK Unmodified 1195.5543 0.55432356 3371 Q8N8S7 ENAH Protein enabled homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 2 1 1 1 1 38.616 38.187 2 0.0013097 42409 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 89.047 70.272 274770000 0 84334000 0 17357000 18375000 22914000 21280000 21776000 12428000 34726000 0 0 15331000 26252000 0 738 3371 674 6261;6262;6263;6264;6265;6266;6267;6268;6269;6270;6271 5048;5049;5050;5051;5052;5053;5054;5055;5056;5057;5058;5059;5060 5049 12 AAVPAPPPEPEGQDPPAPSQDTS Unmodified 2254.039 0.038970866 3879 Q96IK1 BOD1 Biorientation of chromosomes in cell division protein 1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By matching 9.25 2.49 1 11 1 1 1 1 1 1 1 1 1 1 1 1 62.221 62.756 2;3 0.019516 80415 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 27.846 24.702 62669000 12403000 0 0 2452400 2641500 2833700 2317200 3503800 0 5507100 7122800 6225500 6883600 5033500 5745300 739 3879 675 6272;6273;6274;6275;6276;6277;6278;6279;6280;6281;6282;6283 5061;5062;5063 5062 2 AAVPDAVGK Unmodified 826.45487 0.45486751 792 P05023;P13637;P50993 ATP1A1;ATP1A3;ATP1A2 Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-3;Sodium/potassium-transporting ATPase subunit alpha-2 yes no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 23.655 23.879 2 0.019553 25690 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 53.878 31.386 74441000 0 0 0 5946200 4330100 4238100 0 5776500 2779600 7150500 7143100 9498400 10844000 6522300 10212000 740 792 676 6284;6285;6286;6287;6288;6289;6290;6291;6292;6293;6294 5064;5065;5066 5066 3 AAVPELLQQQEEDRSK Acetyl (Protein N-term) 1881.9432 0.94321999 5254 Q9Y5X3 SNX5 Sorting nexin-5 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.08 4 1 21 1 3 1 2 2 1 2 2 2 2 2 2 2 1 1 79.266 78.407 2;3 5.1703E-42 90734 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 195.25 177.44 1413800000 14250000 914750000 5494600 24829000 22066000 30111000 47942000 34712000 29758000 54862000 53898000 56269000 32976000 29776000 62129000 741 5254 677 6295;6296;6297;6298;6299;6300;6301;6302;6303;6304;6305;6306;6307;6308;6309;6310;6311;6312;6313;6314;6315;6316;6317;6318;6319;6320 5067;5068;5069;5070;5071;5072;5073;5074;5075;5076;5077;5078;5079;5080;5081;5082;5083;5084;5085;5086;5087;5088;5089 5067 22 AAVPGYPQPSGTPVKPTALTGTLQVR Unmodified 2605.4228 0.4227861 2938 Q6P5Z2 PKN3 Serine/threonine-protein kinase N3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 78.428 78.532 3 3.1079E-08 90741 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 48.097 45.054 68997000 0 0 0 0 3788000 7892900 3211800 9898200 4450600 9120500 4570400 7989800 3855800 4392900 9826400 742 2938 678 6321;6322;6323;6324;6325;6326;6327;6328;6329;6330;6331 5090;5091;5092;5093;5094;5095;5096;5097;5098;5099;5100 5091 11 AAVPSGASTGIYEALELR Unmodified 1803.9367 0.93667805 827;991 P06733;P09104;P13929 ENO1;ENO2;ENO3 Alpha-enolase;Gamma-enolase;Beta-enolase no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 2 1 2 2 85.039 85.197 2;3 2.234E-05 97836 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 88.087 71.709 93437000 0 0 0 0 0 0 0 0 0 0 14562000 9183900 0 9738800 59952000 743 827;991 679 6332;6333;6334;6335;6336;6337;6338 5101;5102;5103;5104;5105 5104 4 AAVPSGASTGIYEALELRDNDK Unmodified 2276.1285 0.12845458 827 P06733 ENO1 Alpha-enolase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.64 3.88 5 1 8 2 3 1 1 1 1 1 1 1 1 1 80.528 79.206 3 4.2758E-74 100246 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 140.2 131.11 1401000000 66171000 137840000 41799000 11668000 3312900 8151800 0 0 0 22386000 107350000 144920000 0 83417000 773980000 744 827 680 6339;6340;6341;6342;6343;6344;6345;6346;6347;6348;6349;6350;6351;6352 5106;5107;5108;5109;5110;5111;5112;5113;5114;5115;5116;5117;5118;5119;5120;5121 5112 16 AAVQAAEVK Acetyl (Protein N-term) 927.50255 0.50254598 2485 Q15046 KARS Lysine--tRNA ligase yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.21 3.43 1 2 11 2 1 1 1 1 1 1 1 1 1 1 1 1 45.239 45.013 2 0.0011463 44033 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 89.698 62.561 539970000 197410000 0 3500300 13621000 11880000 18597000 17604000 0 14011000 29634000 44784000 51506000 20558000 34758000 82108000 745 2485 681 6353;6354;6355;6356;6357;6358;6359;6360;6361;6362;6363;6364;6365;6366 5122;5123;5124;5125;5126;5127;5128;5129;5130;5131;5132;5133;5134;5135;5136 5131 14 AAVQMDPELAK Acetyl (Protein N-term) 1213.6013 0.60127375 5132 Q9Y312 AAR2 Protein AAR2 homolog yes yes 1 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.1 2.7 1 9 1 1 1 1 1 1 1 1 1 1 73.235 73.8 2 0.00086224 80359 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 66.621 39.367 79113000 18258000 0 0 3262300 5367800 0 5340300 5382100 4364400 8689800 10481000 0 4739900 0 13228000 746 5132 682 6367;6368;6369;6370;6371;6372;6373;6374;6375;6376 5137;5138;5139;5140;5141;5142 5137 6 AAVQMDPELAK Acetyl (Protein N-term);Oxidation (M) 1229.5962 0.59618837 5132 Q9Y312 AAR2 Protein AAR2 homolog yes yes 1 1 0 By MS/MS 1 0 1 1 102.08 107.35 2 0.0077554 87126 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 57.859 37.338 5574100 5574100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 747 5132 682 6377 5143 5143 6520 1 AAVSVQER Unmodified 858.45593 0.45593014 3186 Q86WR7 PROSER2 Proline and serine-rich protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 14.488 14.594 2 0.011977 13951 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 75.692 33.8 104270000 0 0 0 11596000 10369000 9370200 6916400 8335300 6801500 13756000 16361000 0 7109400 13658000 0 748 3186 683 6378;6379;6380;6381;6382;6383;6384;6385;6386;6387 5144;5145;5146;5147;5148;5149;5150 5145 7 AAVVENVVK Acetyl (Protein N-term) 969.5495 0.54949617 3660 Q92785 DPF2 Zinc finger protein ubi-d4 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.34 1 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 81.359 80.903 2 0.0013346 91003 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 107.9 82.001 519480000 54403000 15413000 0 30007000 37071000 31401000 36369000 26184000 28720000 41906000 50663000 48403000 41444000 30253000 47245000 749 3660 684 6388;6389;6390;6391;6392;6393;6394;6395;6396;6397;6398;6399;6400;6401;6402 5151;5152;5153;5154;5155;5156 5153 6 AAVVPLGTWR Unmodified 1068.608 0.60801411 2499 Q15125 EBP 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 73.969 74.004 2 0.0053211 84305 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 69.423 58.013 106860000 0 0 0 8347900 7957200 11213000 6622400 8401000 7474400 12380000 12403000 12414000 10698000 8951400 0 750 2499 685 6403;6404;6405;6406;6407;6408;6409;6410;6411;6412;6413 5157;5158;5159;5160;5161;5162;5163;5164;5165 5162 9 AAVVTSPPPTTAPHK Unmodified 1472.7987 0.798728 1361 P35611 ADD1 Alpha-adducin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 32.193 32.008 3 0.00087742 34871 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 52.5 30.725 152270000 0 15609000 0 0 0 12235000 0 14654000 9172500 12999000 20228000 19038000 16794000 13578000 17966000 751 1361 686 6414;6415;6416;6417;6418;6419;6420;6421;6422;6423 5166;5167;5168;5169;5170;5171;5172;5173;5174;5175 5167 8 AAWAEYEAEK Unmodified 1166.5244 0.52440364 1498 P46100 ATRX Transcriptional regulator ATRX yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 49.018 43.75 2 0.036902 56647 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 56.258 46.62 18589000 0 18589000 0 0 0 0 0 0 0 0 0 0 0 0 0 752 1498 687 6424;6425 5176 5176 1 AAWDVEWAVLK Unmodified 1286.6659 0.66592292 5191 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 yes yes 0 0 0 By MS/MS 2 0 2 2 48.358 44.35 3 0.021708 61087 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 33.088 10.614 6863500 6863500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 753 5191 688 6426;6427 5177 5177 1 AAWEAYLSR Unmodified 1065.5243 0.52434406 936 P11172 UMPS Uridine 5'-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5'-phosphate decarboxylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 71.285 71.507 2 0.0084056 81585 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.716 54.074 77150000 0 0 0 0 0 0 0 10792000 2543700 12017000 8744900 12525000 4661500 7819400 18046000 754 936 689 6428;6429;6430;6431;6432;6433;6434;6435 5178;5179;5180;5181 5179 4 AAYADLLTPLISK Unmodified 1374.7759 0.7758673 612 O94967 WDR47 WD repeat-containing protein 47 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 89.373 89.487 2 0.0085796 103582 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.401 44.038 4704700 0 0 0 0 0 0 0 0 0 1340400 0 0 453530 0 2910700 755 612 690 6436;6437;6438 5182 5182 1 AAYAGGLVLDPK Unmodified 1173.6394 0.63937381 895 P09884 POLA1 DNA polymerase alpha catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65.907 64.796 2 0.013135 74187 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 57.347 40.807 447160000 15591000 298780000 3543300 8002800 7228400 11539000 8916200 10413000 7411200 13317000 11297000 13884000 9541000 8337200 19366000 756 895 691 6439;6440;6441;6442;6443;6444;6445;6446;6447;6448;6449;6450;6451;6452;6453 5183;5184;5185 5183 2 AAYEAELGDAR Unmodified 1164.5411 0.54111633 757 P02545 LMNA Prelamin-A/C;Lamin-A/C yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching 10 0 6 1 1 1 1 1 1 39.151 39.246 2 0.03465 44120 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 37.696 27.282 27580000 0 0 0 5239500 2481600 0 0 0 0 4175000 0 6569700 4239600 4874200 0 757 757 692 6454;6455;6456;6457;6458;6459 5186 5186 1 AAYEAELGDARK Unmodified 1292.6361 0.63607935 757 P02545 LMNA Prelamin-A/C;Lamin-A/C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.29 6 1 24 2 3 2 2 2 2 2 2 2 2 2 2 2 2 2 32.194 31.214 2;3 5.3089E-07 32765 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 118.4 96.94 2915100000 225840000 871350000 191060000 150600000 58007000 24364000 97719000 102680000 63987000 124360000 216020000 255110000 90753000 117290000 325950000 758 757 693 6460;6461;6462;6463;6464;6465;6466;6467;6468;6469;6470;6471;6472;6473;6474;6475;6476;6477;6478;6479;6480;6481;6482;6483;6484;6485;6486;6487;6488;6489;6490 5187;5188;5189;5190;5191;5192;5193;5194;5195;5196;5197;5198;5199;5200;5201;5202;5203;5204;5205;5206;5207;5208;5209;5210;5211;5212;5213;5214;5215;5216;5217;5218;5219;5220;5221 5197 31 AAYLNMSEDPSHPSMALNTR Unmodified 2203.999 0.99903708 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 69.075 69.219 3 0.0019538 79408 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 37.112 32.245 101650000 0 0 0 0 4762700 8448700 3626200 8705500 5032800 11383000 8317200 12307000 5664900 9730700 23668000 759 2451 694 6491;6492;6493;6494;6495;6496;6497;6498;6499;6500;6501 5222;5223;5224;5225;5226;5227 5227 3 AAYLNMSEDPSHPSMALNTR 2 Oxidation (M) 2235.9889 0.98886633 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS 10 0 4 2 1 1 46.517 47.069 3 8.9988E-05 52564 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.112 44.873 40569000 0 0 0 0 0 0 0 10858000 0 0 0 16375000 0 0 13336000 760 2451 694 6502;6503;6504;6505 5228;5229;5230;5231 5231 4016;4017 4 AAYLQETGK Unmodified 979.49746 0.4974606 773 P04083 ANXA1 Annexin A1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 23.125 22.735 2 0.0076144 28712 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.629 45.278 948100000 0 781810000 0 13260000 0 20316000 0 0 0 26836000 34585000 43265000 0 28024000 0 761 773 695 6506;6507;6508;6509;6510;6511;6512 5232;5233;5234;5235;5236 5233 5 AAYLQETGKPLDETLK Unmodified 1775.9305 0.93053004 773 P04083 ANXA1 Annexin A1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 4 2 22 1 4 1 2 2 2 2 2 2 2 2 2 2 2 61.795 60.684 2;3 6.6729E-90 75144 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 206.69 181.22 3383000000 107830000 2422500000 78895000 36223000 18074000 39342000 39388000 87520000 0 29388000 91228000 116540000 45030000 68535000 202470000 762 773 696 6513;6514;6515;6516;6517;6518;6519;6520;6521;6522;6523;6524;6525;6526;6527;6528;6529;6530;6531;6532;6533;6534;6535;6536;6537;6538;6539;6540 5237;5238;5239;5240;5241;5242;5243;5244;5245;5246;5247;5248;5249;5250;5251;5252;5253;5254;5255;5256;5257;5258;5259;5260;5261;5262;5263;5264;5265;5266;5267;5268 5254 25 AAYLSDPR Unmodified 891.44503 0.4450311 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.99 29.186 2 0.043878 31941 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 49.097 34.321 784200000 0 0 0 49176000 44207000 59450000 37609000 42864000 36452000 67203000 78235000 96672000 77775000 70146000 124410000 763 1986 697 6541;6542;6543;6544;6545;6546;6547;6548;6549;6550;6551;6552 5269 5269 1 AAYLSDPRAPPCEYK Unmodified 1736.8192 0.81920545 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 48.942 48.096 3 5.1725E-05 62471 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.764 64.494 1080900000 0 757240000 53151000 9286500 12046000 16829000 10028000 16288000 14761000 25689000 30628000 31974000 28206000 28872000 45921000 764 1986 698 6553;6554;6555;6556;6557;6558;6559;6560;6561;6562;6563;6564;6565;6566;6567 5270;5271;5272;5273;5274;5275;5276;5277;5278;5279;5280;5281;5282;5283 5273 11 AAYNLVK Unmodified 777.43849 0.43848916 861 P08237 PFKM ATP-dependent 6-phosphofructokinase, muscle type yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 32.297 32.458 2 0.024701 34837 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 82.263 35.217 945030000 0 0 0 45186000 59205000 68899000 69051000 75039000 53731000 89173000 0 179140000 77636000 72914000 155050000 765 861 699 6568;6569;6570;6571;6572;6573;6574;6575;6576;6577;6578 5284;5285;5286;5287 5286 4 AAYNPGQAVPWNAVK Unmodified 1584.8049 0.80487601 3308 Q8N163 CCAR2 Cell cycle and apoptosis regulator protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 74.37 73.332 2 1.7212E-40 91567 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 146.11 130.52 574210000 27633000 148960000 0 18668000 25116000 32516000 19337000 28062000 22329000 48497000 38015000 34451000 34543000 33699000 62387000 766 3308 700 6579;6580;6581;6582;6583;6584;6585;6586;6587;6588;6589;6590;6591;6592;6593 5288;5289;5290;5291;5292;5293;5294;5295;5296;5297;5298 5289 11 AAYNVTLLNFMDPQK Oxidation (M) 1739.8553 0.8552566 4282 Q9C0B1 FTO Alpha-ketoglutarate-dependent dioxygenase FTO yes yes 0 1 0 By MS/MS By matching By matching By matching 10 0 4 1 1 1 1 83.038 83.182 2 0.0018334 96242 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 46.352 28.543 11737000 0 0 0 0 0 4212000 1819500 3667600 2038000 0 0 0 0 0 0 767 4282 701 6594;6595;6596;6597 5299 5299 5739 1 AAYPDLENPPLLVTPSQQAK Unmodified 2151.1212 0.12118435 1733 P54136 RARS Arginine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.69 2.88 3 2 24 1 4 2 2 2 2 2 2 2 2 2 2 2 2 83.984 83.202 2;3 4.5989E-08 102752 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.99 103.09 2882200000 16579000 2117300000 0 16936000 33828000 59474000 30383000 37671000 45940000 96960000 88717000 92693000 49964000 64055000 131670000 768 1733 702 6598;6599;6600;6601;6602;6603;6604;6605;6606;6607;6608;6609;6610;6611;6612;6613;6614;6615;6616;6617;6618;6619;6620;6621;6622;6623;6624;6625;6626 5300;5301;5302;5303;5304;5305;5306;5307;5308;5309;5310;5311;5312;5313;5314;5315;5316 5305 17 AAYVLFYQR Unmodified 1129.592 0.59202969 5198;1670;2233 Q9Y4E8;Q13107;P51784 USP15;USP4;USP11 Ubiquitin carboxyl-terminal hydrolase 15;Ubiquitin carboxyl-terminal hydrolase 4;Ubiquitin carboxyl-terminal hydrolase 11 no no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 73.158 73.241 2 0.022002 84754 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 51.787 37.121 58607000 0 0 0 4720000 0 8367200 5918400 4565300 0 6146500 8346800 0 4969000 4826600 10747000 769 5198;2233;1670 703 6627;6628;6629;6630;6631;6632;6633;6634;6635 5317;5318 5318 2 AAYWEEEPAEVRR Unmodified 1604.7583 0.75831975 5301 Q9Y6Y8 SEC23IP SEC23-interacting protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 51.018 50.982 3 0.0022351 56628 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 46.481 35.041 135400000 0 0 0 15661000 17818000 0 17534000 0 0 0 0 0 0 29803000 54588000 770 5301 704 6636;6637;6638;6639;6640;6641 5319;5320;5321;5322;5323 5321 5 ACANPAAGSVILLENLR Unmodified 1767.9302 0.93015288 733 P00558 PGK1 Phosphoglycerate kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 6 2 22 1 5 2 1 2 2 2 2 2 2 2 2 1 2 2 89.666 88.593 2;3 4.4386E-69 102831 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 203.29 194.54 1363600000 101860000 645090000 37095000 1201700 2448300 4894200 3405900 3663500 4599000 7159200 70931000 59284000 2123000 54593000 365220000 771 733 705 6642;6643;6644;6645;6646;6647;6648;6649;6650;6651;6652;6653;6654;6655;6656;6657;6658;6659;6660;6661;6662;6663;6664;6665;6666;6667;6668;6669;6670;6671 5324;5325;5326;5327;5328;5329;5330;5331;5332;5333;5334;5335;5336;5337;5338;5339;5340;5341;5342 5335 13 ACANPAAGSVILLENLRFHVEEEGK Unmodified 2723.3701 0.37009861 733 P00558 PGK1 Phosphoglycerate kinase 1 yes yes 0 0 1 By MS/MS By MS/MS 2.67 0.471 1 2 2 1 95.704 90.74 4 5.1702E-25 114927 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.835 89.674 27264000 21673000 5591300 0 0 0 0 0 0 0 0 0 0 0 0 0 772 733 706 6672;6673;6674 5343;5344 5344 2 ACARPLISVYSEK Acetyl (Protein N-term) 1534.7814 0.78136338 1377 P36578 RPL4 60S ribosomal protein L4 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 72.376 71.694 2 3.407E-30 91995 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 164.65 122.32 300020000 15130000 0 0 0 20062000 0 19290000 24403000 16551000 0 30353000 49128000 35580000 44466000 45058000 773 1377 707 6675;6676;6677;6678;6679;6680;6681;6682;6683;6684 5345;5346;5347;5348;5349;5350;5351;5352;5353;5354 5348 10 ACDELVEEMEHYGK Unmodified 1708.7073 0.70727174 159 O00469 PLOD2 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.8 3.12 3 1 1 1 2 1 1 76.746 72.998 3 0.0002477 88177 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 69.716 67.354 188550000 30588000 146970000 3729900 0 0 0 0 0 0 0 0 0 0 0 7262800 774 159 708 6685;6686;6687;6688;6689 5355;5356;5357;5358;5359;5360 5358 6 ACDELVEEMEHYGK Oxidation (M) 1724.7022 0.70218636 159 O00469 PLOD2 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 yes yes 0 1 0 By MS/MS 3 0 1 1 46.063 41.209 3 0.004087 51222 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 48.527 43.979 6038400 0 6038400 0 0 0 0 0 0 0 0 0 0 0 0 0 775 159 708 6690 5361 5361 221 1 ACDESVLMDLK Unmodified 1279.5788 0.57882375 4941 Q9UJV9 DDX41 Probable ATP-dependent RNA helicase DDX41 yes yes 0 0 0 By MS/MS 2 0 1 1 75.963 71.023 2 0.018585 88911 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.557 31.785 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 776 4941 709 6691 5362 5362 1 ACDFLLSR Unmodified 980.47495 0.47495102 1539 P48449 LSS Lanosterol synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 59.845 59.752 2 0.041222 67772 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 50.04 20.891 14197000 0 0 0 2931300 2348800 0 0 0 1909000 0 3626800 0 0 3381100 0 777 1539 710 6692;6693;6694;6695;6696 5363 5363 1 ACEIRDQITSK Unmodified 1319.6503 0.65034921 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 1 By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.06 2.58 2 15 1 1 1 1 1 1 1 1 2 2 1 1 2 1 26.446 26.197 2;3 0.00028594 27323 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 138.25 90.378 211730000 0 6375900 8180100 5913900 4477400 9005300 6015400 4497100 6242100 43573000 47686000 14889000 11739000 30005000 13130000 778 3676 711 6697;6698;6699;6700;6701;6702;6703;6704;6705;6706;6707;6708;6709;6710;6711;6712;6713 5364;5365;5366;5367;5368;5369 5369 5 ACELWEQILQDHPTDMLALK Unmodified 2410.1661 0.16610241 2753 Q5R3I4 TTC38 Tetratricopeptide repeat protein 38 yes yes 0 0 0 By MS/MS 3 0 1 1 97.589 94.281 3 0.0013968 113059 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 46.663 37.662 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 779 2753 712 6714 5370 5370 1 ACFQVGTSEEMK Oxidation (M) 1401.5905 0.59045107 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 36.12 35.588 2 2.694E-14 44246 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.16 131.7 122400000 0 41438000 0 5244800 4359800 3799100 6906900 6853100 5047400 7210900 8361800 11336000 8146600 6729600 6962800 780 1364 713 6715;6716;6717;6718;6719;6720;6721;6722;6723;6724;6725;6726;6727;6728 5371;5372;5373;5374;5375;5376;5377;5378;5379;5380;5381;5382;5383;5384 5373 2110 14 ACFQVGTSEEMK Unmodified 1385.5955 0.59553644 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 47.224 47.457 2 0.0027631 52241 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.008 77.962 65820000 0 0 0 0 3192500 3866800 3805900 4455900 5114100 8380200 10445000 8834300 6086500 0 11639000 781 1364 713 6729;6730;6731;6732;6733;6734;6735;6736;6737;6738 5385;5386;5387;5388 5386 4 ACGLNFADLMAR Unmodified 1337.622 0.62202597 4019 Q99536 VAT1 Synaptic vesicle membrane protein VAT-1 homolog yes yes 0 0 0 By MS/MS 10 0 1 1 84.988 85.167 2 0.0011772 98377 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.028 47.942 3933600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3933600 782 4019 714 6739 5389 5389 1 ACGLVASNLNLK Acetyl (Protein N-term) 1300.6809 0.68092105 881 P09382 LGALS1 Galectin-1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 4.8 4.26 2 1 2 1 2 1 1 91.584 91.927 2 1.2011E-15 97557 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 146.69 127.72 113960000 23027000 56190000 0 0 0 0 0 0 0 0 18179000 0 0 16565000 0 783 881 715 6740;6741;6742;6743;6744 5390;5391;5392;5393;5394;5395 5394 6 ACGLVASNLNLKPGECLR Acetyl (Protein N-term) 2013.0136 0.013564934 881 P09382 LGALS1 Galectin-1 yes yes 1 0 1 By MS/MS By MS/MS 10 0 2 1 1 82.237 82.412 3 0.00018513 95555 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.864 47.474 24140000 0 0 0 0 0 0 0 0 0 0 0 6077700 0 0 18063000 784 881 716 6745;6746 5396;5397 5397 2 ACGNFGIPCELR Unmodified 1392.6278 0.62783962 1135 P22234 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 71.33 71.457 2 0.0094462 81338 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 60.398 46.191 52518000 0 0 0 5757000 0 0 0 0 2681300 0 10050000 9518600 3998200 7993100 12519000 785 1135 717 6747;6748;6749;6750;6751;6752;6753 5398;5399;5400;5401;5402 5400 4 ACGNFGIPCELRVTSAHK Unmodified 2015.9669 0.96694909 1135 P22234 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes yes 0 0 1 By MS/MS 2 0 1 1 75.669 67.538 4 0.0043011 89159 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 27.032 20.909 27668000 27668000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 786 1135 718 6754 5403;5404 5404 2 ACGSEIMQK Oxidation (M) 1038.4474 0.44741564 1029 P15924 DSP Desmoplakin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 7.7774 7.9116 2 0.0058414 6427 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 68.383 39.96 46858000 0 0 0 0 3047500 2676300 4118400 3075100 3915500 7676100 0 9103400 5226800 5070700 2948400 787 1029 719 6755;6756;6757;6758;6759;6760;6761;6762;6763;6764 5405;5406;5407;5408 5408 1425 4 ACGSEIMQK Unmodified 1022.4525 0.45250102 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS 2 0 1 1 21.171 17.458 2 0.006421 22898 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.75 52.447 39973000 0 39973000 0 0 0 0 0 0 0 0 0 0 0 0 0 788 1029 719 6765 5409 5409 1 ACIDSNEDGDLSK Unmodified 1422.5933 0.59328784 1243 P29144 TPP2 Tripeptidyl-peptidase 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 26.883 27.191 2 4.3356E-08 28207 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 104.52 96.48 20845000 0 0 0 4507800 0 0 0 0 0 0 5835800 0 0 5306100 5195400 789 1243 720 6766;6767;6768;6769 5410;5411;5412 5410 3 ACISFNK Unmodified 838.40072 0.40072345 2945 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 36.885 31.212 2 0.023268 43681 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 105.22 60.797 65034000 13933000 51101000 0 0 0 0 0 0 0 0 0 0 0 0 0 790 2945 721 6770;6771 5413;5414 5414 2 ACISIGNQNFEVK Unmodified 1478.7188 0.71876312 1688 P52564 MAP2K6 Dual specificity mitogen-activated protein kinase kinase 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.86 3.4 1 1 5 2 1 1 1 1 1 71.571 71.157 2 3.2078E-13 88582 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.6 97.482 92932000 0 17416000 0 0 0 0 0 0 0 20159000 0 16925000 7494200 9199600 21737000 791 1688 722 6772;6773;6774;6775;6776;6777;6778 5415;5416;5417;5418;5419;5420;5421 5416 7 ACLDTAVENMPSLK Oxidation (M) 1563.7273 0.7272789 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.9 2.69 2 1 18 3 1 1 2 2 1 1 3 2 2 2 1 54.094 53.429 2 1.9461E-14 66808 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.14 102.16 345740000 0 97608000 0 9700100 0 43036000 22001000 0 6249000 21590000 44678000 39415000 18381000 24923000 18161000 792 1565 723 6779;6780;6781;6782;6783;6784;6785;6786;6787;6788;6789;6790;6791;6792;6793;6794;6795;6796;6797;6798;6799 5422;5423;5424;5425;5426;5427;5428;5429;5430;5431;5432;5433;5434;5435;5436 5426 2491 15 ACLDTAVENMPSLK Unmodified 1547.7324 0.73236428 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 74.472 73.934 2 2.8493E-85 85587 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 192.5 178.56 1730200000 0 984850000 0 24487000 10015000 135280000 19295000 8371000 25908000 60512000 68598000 113360000 39095000 64379000 176030000 793 1565 723 6800;6801;6802;6803;6804;6805;6806;6807;6808;6809;6810;6811;6812;6813 5437;5438;5439;5440;5441;5442;5443;5444;5445;5446;5447;5448;5449;5450;5451 5448 15 ACLENLGLK Unmodified 1016.5325 0.5324659 1383 P36952 SERPINB5 Serpin B5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 57.824 56.443 2 0.0036746 63215 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 89.296 70.513 563560000 7231300 281530000 4502700 16063000 0 26792000 8306000 4503400 13826000 26402000 26713000 37901000 23070000 30201000 56516000 794 1383 724 6814;6815;6816;6817;6818;6819;6820;6821;6822;6823;6824;6825;6826;6827;6828 5452;5453;5454;5455;5456;5457;5458;5459;5460;5461;5462;5463;5464 5464 13 ACLQDSYDNLQEIMK Unmodified 1826.8179 0.81788482 4621 Q9NS87 KIF15 Kinesin-like protein KIF15 yes yes 0 0 0 By MS/MS 2 0 1 1 84.42 79.676 2 0.040626 99139 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.241 45.6 18555000 0 18555000 0 0 0 0 0 0 0 0 0 0 0 0 0 795 4621 725 6829 5465 5465 0 ACLQPSQDPQMR Unmodified 1429.6442 0.64421797 3204 Q86Y56 DNAAF5 Dynein assembly factor 5, axonemal yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 2 1 1 1 1 1 1 1 1 34.296 34.485 2 2.469E-05 37504 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 92.838 69.315 85536000 0 0 0 4694400 5116300 0 4109700 4221800 6339100 8392600 16068000 12904000 8480500 0 15209000 796 3204 726 6830;6831;6832;6833;6834;6835;6836;6837;6838;6839;6840;6841 5466;5467;5468;5469;5470;5471;5472;5473;5474;5475;5476 5471 11 ACLQPSQDPQMR Oxidation (M) 1445.6391 0.63913259 3204 Q86Y56 DNAAF5 Dynein assembly factor 5, axonemal yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 23.322 23.586 2 0.0036915 24656 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 53.751 33.964 29931000 0 0 0 3739500 0 2083800 1708800 1417300 1764300 0 2582000 5708200 4068600 3237500 3621000 797 3204 726 6842;6843;6844;6845;6846;6847;6848;6849;6850;6851 5477;5478 5477 4820 2 ACLVTTVTSSGPSQSTIK Unmodified 1835.9299 0.92987811 4266 Q9BZH6 WDR11 WD repeat-containing protein 11 yes yes 0 0 0 By MS/MS 2.5 0.5 2 2 4 64.941 59.609 2;3 0.0014729 73092 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 77.593 62.903 91951000 0 91951000 0 0 0 0 0 0 0 0 0 0 0 0 0 798 4266 727 6852;6853;6854;6855 5479;5480 5480 2 ACMAVEEAAK Unmodified 1078.4787 0.47871577 34 A7E2V4 ZSWIM8 Zinc finger SWIM domain-containing protein 8 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 26.251 26.487 2 0.019341 27028 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.869 21.93 14962000 0 0 0 0 1565800 0 0 1856600 1505100 0 2619900 0 0 2509000 4905600 799 34 728 6856;6857;6858;6859;6860;6861 5481;5482;5483;5484 5481 4 ACMAVEEAAK Oxidation (M) 1094.4736 0.47363039 34 A7E2V4 ZSWIM8 Zinc finger SWIM domain-containing protein 8 yes yes 0 1 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 14.518 14.643 2 0.0055646 14321 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 60.019 41.288 20956000 0 0 0 2203100 0 1977700 1836900 0 2719800 0 0 0 4711800 3337900 4168900 800 34 728 6862;6863;6864;6865;6866;6867;6868 5485;5486;5487 5487 30 3 ACMVGHVDFK Unmodified 1162.5263 0.52633467 4584 Q9NR09 BIRC6 Baculoviral IAP repeat-containing protein 6 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 50.949 44.966 3 0.045761 62183 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.579 46.274 44088000 39462000 0 4625400 0 0 0 0 0 0 0 0 0 0 0 0 801 4584 729 6869;6870 5488 5488 0 ACNAIEDAQSTR Unmodified 1334.5885 0.58847723 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.973 25.176 2 0.0011366 26754 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 70.363 56.771 250800000 0 0 0 9256100 21334000 14893000 20962000 14954000 21351000 19282000 22726000 23280000 19610000 40571000 22585000 802 3023 730 6871;6872;6873;6874;6875;6876;6877;6878;6879;6880;6881;6882 5489;5490;5491;5492;5493;5494;5495;5496;5497 5491 9 ACPALGLEALQPLQPEPPPEPAFSEAQK Acetyl (Protein N-term) 3026.5059 0.50592338 5054 Q9UPQ0 LIMCH1 LIM and calponin homology domains-containing protein 1 yes yes 1 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 97.092 97.239 3 1.2992E-18 113154 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 62.374 60.151 63725000 0 0 0 0 0 0 2089900 4651200 0 16108000 15116000 8599900 0 0 17160000 803 5054 731 6883;6884;6885;6886;6887;6888 5498;5499;5500;5501;5502;5503 5498 6 ACPLDQAIGLLVAIFHK Acetyl (Protein N-term) 1907.0339 0.033889671 825 P06703 S100A6 Protein S100-A6 yes yes 1 0 0 By MS/MS 2.5 0.5 1 1 2 107.54 103.33 3 2.7891E-26 124262 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 97.836 92.056 55809000 0 55809000 0 0 0 0 0 0 0 0 0 0 0 0 0 804 825 732 6889;6890 5504;5505 5505 2 ACPLQPDHTNDEK Unmodified 1523.6675 0.66745583 2468 Q15004 KIAA0101 PCNA-associated factor yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 20.714 16.613 3 0.00031001 22294 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.858 91.858 143090000 11588000 131510000 0 0 0 0 0 0 0 0 0 0 0 0 0 805 2468 733 6891;6892;6893 5506;5507;5508;5509 5507 4 ACPLQPDHTNDEKE Unmodified 1652.71 0.71004893 2468 Q15004 KIAA0101 PCNA-associated factor yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.86 3.4 2 2 10 4 1 1 1 1 1 1 1 1 1 1 20.636 19.664 2;3 0.0070556 25226 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.557 63.017 119830000 0 58411000 0 8011900 6362500 0 6944300 6815500 0 4715800 7627800 7107200 4810700 3469500 5552100 806 2468 734 6894;6895;6896;6897;6898;6899;6900;6901;6902;6903;6904;6905;6906;6907 5510;5511;5512;5513 5510 3 ACPRPEGLNFQDLK Unmodified 1643.809 0.80897511 1030 P15927 RPA2 Replication protein A 32 kDa subunit yes yes 0 0 1 By MS/MS 10 0 1 1 63.823 63.796 3 0.013387 73227 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 35.657 29.575 11359000 0 0 0 0 0 11359000 0 0 0 0 0 0 0 0 0 807 1030 735 6908 5514 5514 1 ACQEVLEK Unmodified 975.46953 0.46953129 4840 Q9UBF8 PI4KB Phosphatidylinositol 4-kinase beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 17.452 17.703 2 0.013529 16565 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.138 35.953 47548000 0 0 0 4973500 0 3070700 0 3954700 2524600 4509000 4497300 7520100 6029400 4674600 5794500 808 4840 736 6909;6910;6911;6912;6913;6914;6915;6916;6917;6918;6919 5515;5516;5517;5518;5519;5520 5518 6 ACQIFVR Unmodified 892.45891 0.45890703 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 40.153 40.547 2 0.03046 44429 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 74.717 43.976 191150000 0 0 0 0 0 17204000 0 0 15890000 0 29871000 41114000 33298000 20227000 33547000 809 1681 737 6920;6921;6922;6923;6924;6925;6926 5521;5522;5523 5523 3 ACQLSVVVDDKK Unmodified 1360.7021 0.70205043 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 0 1 By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 40.125 40.415 3 0.042364 44782 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 15.478 7.0048 43894000 0 0 0 0 3652500 0 4707000 2925200 0 0 5714900 9296800 4029000 5438700 8130300 810 1201 738 6927;6928;6929;6930;6931;6932;6933;6934 5524 5524 1 ACQSIYPLHDVFVR Unmodified 1703.8454 0.84536062 1842 P61247 RPS3A 40S ribosomal protein S3a yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 77.487 77.636 3 0.0074855 89655 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 29.491 17.515 41255000 0 0 0 0 0 4065200 0 3878500 4217700 0 0 8676000 3839600 0 16578000 811 1842 739 6935;6936;6937;6938;6939;6940 5525;5526;5527 5525 3 ACQSIYPLHDVFVRK Unmodified 1831.9403 0.94032364 1842 P61247 RPS3A 40S ribosomal protein S3a yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 2 1 2 1 2 1 1 2 69.459 69.672 3;4 0.014883 79465 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.746 29.465 99685000 0 0 0 0 0 15186000 0 4584600 9952100 2187900 0 12797000 4543800 7300300 43133000 812 1842 740 6941;6942;6943;6944;6945;6946;6947;6948;6949;6950;6951;6952 5528;5529;5530;5531;5532 5529 3 ACQVTQSRNAK Unmodified 1261.6197 0.61971778 2455 Q14919 DRAP1 Dr1-associated corepressor yes yes 0 0 1 By MS/MS By matching 2 0 4 2 2 6.1888 3.3639 2;3 3.8454E-44 6093 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 215.93 185.24 136270000 126340000 0 9929800 0 0 0 0 0 0 0 0 0 0 0 0 813 2455 741 6953;6954;6955;6956 5533;5534 5534 2 ACRDQEEEYK Unmodified 1326.551 0.55102909 100 CON__Q7RTT2;CON__Q8N1N4-2;Q8N1N4 KRT78 Keratin, type II cytoskeletal 78 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.9778 7.1015 3 0.0010592 4936 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 78.342 69.597 + 176890000 0 0 0 63503000 8400000 8769800 8663000 11989000 7579400 16394000 13456000 8098800 15863000 8299000 5871000 814 100 742 6957;6958;6959;6960;6961;6962;6963;6964;6965;6966;6967;6968 5535;5536;5537;5538;5539;5540;5541;5542;5543;5544 5536 10 ACSAIHAVNLR Unmodified 1210.6241 0.62407488 2228 Q13045 FLII Protein flightless-1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.047 38.228 3 0.0018791 42531 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 64.439 53.687 199600000 0 0 0 10628000 11463000 13225000 10190000 11451000 10568000 16690000 19185000 31942000 14898000 20833000 28527000 815 2228 743 6969;6970;6971;6972;6973;6974;6975;6976;6977;6978;6979;6980 5545;5546;5547;5548 5545 3 ACSVGAVPGITK Unmodified 1158.6067 0.60669348 4674 Q9NVN8 GNL3L Guanine nucleotide-binding protein-like 3-like protein yes yes 0 0 0 By MS/MS 10 0 1 1 47.491 47.82 2 0.040593 54072 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 34.755 14.234 4970100 0 0 0 0 0 0 0 0 0 0 0 0 4970100 0 0 816 4674 744 6981 5549 5549 1 ACTDESLAVEER Unmodified 1378.6035 0.60345859 392 O60293 ZFC3H1 Zinc finger C3H1 domain-containing protein yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 34.799 35.397 2 0.00093286 38098 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.434 64.629 16946000 0 0 0 0 0 0 0 0 0 0 6906800 0 0 0 10039000 817 392 745 6982;6983 5550;5551 5551 2 ACTILLR Unmodified 845.47931 0.47930812 1570 P49368 CCT3 T-complex protein 1 subunit gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 47.185 47.213 2 0.023669 52789 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 84.359 39.386 175350000 0 0 0 19383000 13556000 21417000 14143000 11805000 26664000 24580000 0 0 0 0 43806000 818 1570 746 6984;6985;6986;6987;6988;6989;6990;6991 5552 5552 1 ACTILLRGASK Unmodified 1188.6649 0.66487706 1570 P49368 CCT3 T-complex protein 1 subunit gamma yes yes 0 0 1 By MS/MS 2 0 1 1 45.853 38.861 2 0.0084372 53509 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.096 72.396 10510000 10510000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 819 1570 747 6992 5553 5553 1 ACTQPRPNYASNFSVIGAR Unmodified 2108.0222 0.022155786 234 O14976 GAK Cyclin-G-associated kinase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 64.265 64.357 3 0.022302 74103 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 25.41 15.31 27011000 0 0 0 0 2329800 0 0 0 4047500 0 0 11759000 5367800 3507100 0 820 234 748 6993;6994;6995;6996;6997 5554 5554 1 ACTTEEDQEK Unmodified 1209.4819 0.48194647 1612 P49915 GMPS GMP synthase [glutamine-hydrolyzing] yes yes 0 0 0 By MS/MS By MS/MS 1 0 2 1 1 106.8 107.69 2 3.4064E-06 99788 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 167.04 140.58 49891000 0 49891000 0 0 0 0 0 0 0 0 0 0 0 0 0 821 1612 749 6998;6999 5555;5556 5556 2 ACVGNAYHK Unmodified 1018.4654 0.46544897 4978 Q9UKX7 NUP50 Nuclear pore complex protein Nup50 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 10.43 6.8607 2 0.012217 9469 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.244 71.255 140260000 97882000 42379000 0 0 0 0 0 0 0 0 0 0 0 0 0 822 4978 750 7000;7001 5557;5558 5557 2 ACVLELEER Unmodified 1117.5438 0.54375887 4199 Q9BW19 KIFC1 Kinesin-like protein KIFC1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 54.653 54.7 2 0.0085067 61092 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 69.423 46.683 67873000 0 0 0 9422300 7260500 13948000 12688000 0 0 0 0 12689000 0 0 11866000 823 4199 751 7002;7003;7004;7005;7006;7007;7008 5559;5560;5561 5561 3 ACYALENFVENLGPK Unmodified 1723.824 0.82395647 3522 Q8TEX9 IPO4 Importin-4 yes yes 0 0 0 By MS/MS 2 0 1 1 96.266 91.445 3 0.013388 113335 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 36.96 23.823 11888000 0 11888000 0 0 0 0 0 0 0 0 0 0 0 0 0 824 3522 752 7009 5562 5562 1 ACYLSINPQK Unmodified 1192.591 0.59104341 1837;1444 P61163;P42025 ACTR1A;ACTR1B Alpha-centractin;Beta-centractin no no 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 52.003 52.165 2 0.013788 59032 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 51.059 33.151 16333000 0 0 0 0 0 0 0 0 5689000 10644000 0 0 0 0 0 825 1837;1444 753 7010;7011 5563 5563 1 ADAAASPVGK Acetyl (Protein N-term) 927.46616 0.46616048 3061 Q7LBC6 KDM3B Lysine-specific demethylase 3B yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.25 2.49 1 11 1 1 1 1 1 1 1 1 1 1 1 1 35.66 36.263 2 0.0012973 32411 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 74.376 50.356 330040000 8658900 0 0 21228000 20757000 24609000 26547000 28986000 22387000 29435000 33900000 42398000 0 28909000 42226000 826 3061 754 7012;7013;7014;7015;7016;7017;7018;7019;7020;7021;7022;7023 5564;5565;5566;5567;5568;5569;5570;5571;5572;5573;5574;5575 5565 12 ADAAATAGAGGSGTR Acetyl (Protein N-term) 1274.5851 0.58510641 3121 Q7Z7C8 TAF8 Transcription initiation factor TFIID subunit 8 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 25.454 25.614 2 9.214E-08 27508 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 89.301 76.264 35770000 0 0 0 0 4046100 0 8007200 0 6750500 0 0 0 0 6518500 10448000 827 3121 755 7024;7025;7026;7027;7028;7029 5576;5577;5578;5579;5580 5580 5 ADAAPQLGK Acetyl (Protein N-term) 911.47125 0.47124585 3773 Q96C86 DCPS m7GpppX diphosphatase yes yes 1 0 0 By MS/MS 1 0 1 1 102.21 107.47 2 0.005977 87269 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 70.525 52.2 12856000 12856000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 828 3773 756 7030 5581 5581 1 ADAEAECNILRK Unmodified 1388.6718 0.67181293 3821 Q96ES7 CCDC101 SAGA-associated factor 29 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 33.681 33.802 3 0.0090504 36759 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 25.98 11.971 19571000 0 0 0 0 3575200 0 1254400 3065800 1353600 2581200 5452300 0 0 2288200 0 829 3821 757 7031;7032;7033;7034;7035;7036;7037 5582;5583;5584 5583 3 ADAEEGIFEIK Unmodified 1220.5925 0.5924832 4255 Q9BYX2 TBC1D2 TBC1 domain family member 2A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 71.655 71.678 2 0.011932 82539 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 48.048 20.421 20837000 0 0 0 3503600 0 2560300 2532000 0 2264100 3087600 3605300 0 3284400 0 0 830 4255 758 7038;7039;7040;7041;7042;7043;7044 5585;5586;5587 5585 3 ADAEGESDLENSR Unmodified 1391.5801 0.58008061 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 20.666 20.981 2 0.0012631 20790 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.659 72.531 11814000 0 0 0 0 0 0 2156500 0 0 0 0 0 0 4211200 5446100 831 5187 759 7045;7046;7047;7048;7049 5588;5589;5590;5591 5590 4 ADAEGESDLENSRK Unmodified 1519.675 0.67504363 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.43 3.14 5 1 24 2 3 1 2 2 2 2 2 2 2 2 2 2 2 2 15.552 14.967 2;3 5.0741E-66 20497 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 201.46 184.09 1261100000 67470000 388790000 9621700 29827000 31646000 72339000 58654000 36401000 26628000 61914000 97532000 87256000 93542000 87127000 112320000 832 5187 760 7050;7051;7052;7053;7054;7055;7056;7057;7058;7059;7060;7061;7062;7063;7064;7065;7066;7067;7068;7069;7070;7071;7072;7073;7074;7075;7076;7077;7078;7079 5592;5593;5594;5595;5596;5597;5598;5599;5600;5601;5602;5603;5604;5605;5606;5607;5608;5609;5610;5611;5612;5613 5602 21 ADAENLIYTADPESFEVNTK Unmodified 2226.0328 0.032822856 4455 Q9H8V3 ECT2 Protein ECT2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 82.733 82.794 2 5.1714E-09 96020 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 95.651 82.514 54017000 0 0 0 919220 3009500 4388900 3108800 5072000 3224600 7151700 7766600 7567000 0 3071700 8737200 833 4455 761 7080;7081;7082;7083;7084;7085;7086;7087;7088;7089;7090 5614;5615;5616;5617;5618;5619;5620;5621;5622 5621 9 ADAESEPVAQK Unmodified 1143.5408 0.54078198 633 O95243 MBD4 Methyl-CpG-binding domain protein 4 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.924 12.061 2 0.014341 10983 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 58.433 40.398 25299000 0 0 0 1443700 1953600 2974000 2180600 2805700 0 2892700 1851500 2623300 3506400 0 3067400 834 633 762 7091;7092;7093;7094;7095;7096;7097;7098;7099;7100;7101 5623;5624 5623 2 ADAEVIILPK Acetyl (Protein N-term) 1109.6332 0.6332258 436 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.36 2.32 1 13 1 1 1 1 1 1 1 2 1 1 1 1 1 90.443 91.725 2 0.00021012 98939 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 122.13 111.72 108470000 56584000 0 0 13898000 0 17879000 0 0 20105000 0 0 0 0 0 0 835 436 763 7102;7103;7104;7105;7106;7107;7108;7109;7110;7111;7112;7113;7114;7115 5625;5626;5627;5628;5629;5630;5631;5632;5633;5634;5635;5636;5637;5638;5639;5640 5626 16 ADAEYYAAHK Unmodified 1137.5091 0.50908792 506 O75477 ERLIN1 Erlin-1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 17.338 17.48 2 0.0091847 17850 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 58.23 44.963 13003000 0 0 0 2104200 768200 1248600 743740 1239000 0 1320000 1148300 2530600 1900500 0 0 836 506 764 7116;7117;7118;7119;7120;7121;7122;7123;7124 5641;5642 5642 2 ADAFGDELFSVFEGDSTTAAGTK Acetyl (Protein N-term) 2377.0598 0.059765888 1451 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes yes 1 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 100.99 95.548 3 1.5268E-24 119244 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.35 104.65 142690000 15781000 126910000 0 0 0 0 0 0 0 0 0 0 0 0 0 837 1451 765 7125;7126;7127 5643;5644;5645 5643 3 ADAGGLGISIK Unmodified 1000.5553 0.55530983 2286 Q13424 SNTA1 Alpha-1-syntrophin yes yes 0 0 0 By MS/MS 2 0 1 1 63.939 58.032 2 0.022412 74510 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.379 34.51 31802000 0 31802000 0 0 0 0 0 0 0 0 0 0 0 0 0 838 2286 766 7128 5646 5646 0 ADAGIRR Acetyl (Protein N-term) 799.43005 0.43004974 2458 Q14978 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.505 15.675 2 0.021279 15727 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 88.029 56.093 605770000 0 0 0 27992000 28372000 23979000 41842000 28897000 24044000 55978000 77692000 89204000 56764000 51121000 99888000 839 2458 767 7129;7130;7131;7132;7133;7134;7135;7136;7137;7138;7139;7140 5647;5648;5649;5650;5651;5652;5653 5647 6 ADAHEEDELRAAEEQR Unmodified 1867.8296 0.82964679 2712 Q567U6 CCDC93 Coiled-coil domain-containing protein 93 yes yes 0 0 1 By matching By matching By matching By MS/MS By matching 10 0 5 1 1 1 1 1 34.263 34.599 3 0.021885 38383 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 29.733 19.265 26756000 0 0 0 0 0 4833800 0 0 0 3170600 6985100 0 3251600 0 8514400 840 2712 768 7141;7142;7143;7144;7145 5654 5654 1 ADAIFQEGIQQK Unmodified 1346.683 0.68302954 413 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 55.809 54.813 2 7.2211E-31 69896 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 187.99 157.31 181160000 4407800 76357000 0 7625000 6265900 10268000 7088800 8156100 6311100 10174000 0 9110000 12123000 8112700 15160000 841 413 769 7146;7147;7148;7149;7150;7151;7152;7153;7154;7155;7156;7157;7158 5655;5656;5657;5658;5659;5660;5661;5662;5663;5664;5665;5666;5667;5668 5659 14 ADALYPVVSAASICAK Unmodified 1634.8338 0.83379288 540 O75792 RNASEH2A Ribonuclease H2 subunit A yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.91 3.42 2 1 8 3 1 1 1 1 1 1 1 1 80.797 79.745 2;3 0.00016214 98524 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.151 68.949 231140000 0 185360000 0 0 0 3121900 2782900 0 4619700 5443900 6661100 9053800 0 5390100 8705300 842 540 770 7159;7160;7161;7162;7163;7164;7165;7166;7167;7168;7169 5669;5670;5671;5672;5673;5674;5675 5670 6 ADAPDAGAQSDSELPSYHQNDVSLDR Unmodified 2757.2114 0.21140894 3615 Q92538 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 59.463 59.639 3 1.7439E-23 67312 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 80.786 71.612 48332000 0 0 0 0 0 5995300 6149500 3934500 4393100 7537100 8451100 0 4754900 7116100 0 843 3615 771 7170;7171;7172;7173;7174;7175;7176;7177 5676;5677;5678;5679;5680;5681;5682;5683;5684 5683 9 ADAPEGLAPEDR Unmodified 1239.5731 0.57314474 3999 Q96T58 SPEN Msx2-interacting protein yes yes 0 0 0 By MS/MS 10 0 1 1 35.881 35.939 2 0.038558 39666 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 33.229 19.721 2772600 0 0 0 0 0 0 2772600 0 0 0 0 0 0 0 0 844 3999 772 7178 5685 5685 1 ADAQANMNEK Unmodified 1090.4713 0.47132221 5360 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 2 2 2 2 2 2 59.279 59.344 2 0.0052017 67463 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 69.905 53.365 + 181350000 0 0 0 28213000 9477900 15370000 10545000 18162000 11914000 18543000 16226000 27228000 16680000 8991300 0 845 5360 773 7179;7180;7181;7182;7183;7184;7185;7186;7187;7188;7189;7190;7191;7192;7193;7194;7195;7196;7197;7198;7199;7200 5686;5687;5688;5689;5690;5691;5692;5693;5694;5695;5696;5697;5698;5699;5700;5701;5702;5703;5704 5699 15 ADAQANMNEK Oxidation (M) 1106.4662 0.46623683 5360 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 2 2 1 1 2 2 2 1 1 1 1 2 64.333 64.384 2 0.0081042 74285 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 52.716 31.416 + 521840000 0 0 0 147040000 44484000 22944000 20445000 64764000 29367000 67577000 23017000 46615000 23803000 11735000 20051000 846 5360 773 7201;7202;7203;7204;7205;7206;7207;7208;7209;7210;7211;7212;7213;7214;7215;7216;7217;7218 5705;5706;5707;5708;5709;5710;5711;5712 5709 6745 7 ADATNVNNWHWTER Unmodified 1712.7655 0.76553039 661 O95433 AHSA1 Activator of 90 kDa heat shock protein ATPase homolog 1 yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 57.472 57.92 3 0.0046428 65065 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.414 45.974 27267000 0 0 0 0 0 0 0 0 0 0 0 4584300 0 4078200 18605000 847 661 774 7219;7220;7221 5713 5713 0 ADATSSQDSELER Unmodified 1407.6114 0.61138074 4017 Q99504 EYA3 Eyes absent homolog 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 18.998 19.188 2 0.01651 19726 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 48.004 26.54 29175000 0 0 0 0 1136800 3828100 1927400 2638000 1393000 3381200 3025600 0 2773000 3122700 5949400 848 4017 775 7222;7223;7224;7225;7226;7227;7228;7229;7230;7231 5714;5715 5715 2 ADAVQDSEMVELVELEIRELLTEFGYK Oxidation (M) 3141.5428 0.5427624 1572 P49411 TUFM Elongation factor Tu, mitochondrial yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 105.62 99.182 3 2.4585E-39 124911 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 103.16 96.866 22835000 16471000 6363300 0 0 0 0 0 0 0 0 0 0 0 0 0 849 1572 776 7232;7233 5716;5717;5718 5718 2521 3 ADAVQDSEMVELVELEIRELLTEFGYK Unmodified 3125.5478 0.54784778 1572 P49411 TUFM Elongation factor Tu, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 2 1 1 106.47 101.74 3 4.1667E-202 126447 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 212.32 199.16 103740000 82278000 19923000 1535700 0 0 0 0 0 0 0 0 0 0 0 0 850 1572 776 7234;7235;7236;7237 5719;5720;5721;5722 5721 4 ADCASGIFLAAEK Unmodified 1351.6442 0.6442012 362 O43747 AP1G1 AP-1 complex subunit gamma-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 69.743 68.426 2 3.3934E-08 86854 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.9 96.677 339890000 9682100 268910000 4637700 2896500 1792200 6404700 3455600 0 2596800 5612100 5043100 7974800 4582100 5035000 11268000 851 362 777 7238;7239;7240;7241;7242;7243;7244;7245;7246;7247;7248;7249;7250;7251;7252;7253 5723;5724;5725;5726;5727;5728;5729;5730;5731;5732;5733;5734;5735;5736;5737;5738;5739;5740 5726 18 ADCPPGNPAPTSNHGPDATEAEEDFVDPWTVQTSSAK Unmodified 3894.6915 0.69150492 1155 P23381 WARS Tryptophan--tRNA ligase, cytoplasmic;T1-TrpRS;T2-TrpRS yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 6.55 3.8 3 2 6 1 4 1 1 1 1 2 82.263 80.169 3;4 7.9114E-110 93196 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 112.81 111.18 422750000 17486000 353350000 0 0 0 0 0 3444100 0 0 8005300 7120800 0 3918400 29428000 852 1155 778 7254;7255;7256;7257;7258;7259;7260;7261;7262;7263;7264 5741;5742;5743;5744;5745;5746;5747;5748 5744 8 ADDGRPFPQVIK Unmodified 1341.7041 0.70409934 771 P04075 ALDOA Fructose-bisphosphate aldolase A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.6 3.51 4 4 17 1 6 1 1 1 1 2 1 2 2 2 2 3 55.05 53.849 2;3 0.00061535 59750 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 107.83 107.83 14441000000 20184000 2940400000 2443600000 123690000 0 230360000 124380000 0 132530000 270440000 1479600000 1504300000 334960000 751410000 4084700000 853 771 779 7265;7266;7267;7268;7269;7270;7271;7272;7273;7274;7275;7276;7277;7278;7279;7280;7281;7282;7283;7284;7285;7286;7287;7288;7289 5749;5750;5751;5752;5753;5754;5755;5756;5757;5758;5759;5760;5761;5762;5763;5764;5765;5766;5767;5768;5769;5770;5771;5772;5773;5774;5775;5776 5773 26 ADDIDIEAMLEAPYK Acetyl (Protein N-term) 1734.8022 0.80221798 2410 Q14498 RBM39 RNA-binding protein 39 yes yes 1 0 0 By MS/MS 1 0 1 1 106.1 111.36 2 5.9844E-31 92000 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 127.17 115.12 14778000 14778000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 854 2410 780 7290 5777 5777 1 ADDIDIEAMLEAPYKK Acetyl (Protein N-term);Oxidation (M) 1878.8921 0.89209562 2410 Q14498 RBM39 RNA-binding protein 39 yes yes 1 1 1 By MS/MS By MS/MS By MS/MS 6.25 3.77 1 1 2 2 1 1 83.955 82.023 2 1.0782E-11 97619 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 112.15 98.468 37715000 0 29892000 0 0 0 0 0 0 2828500 4995200 0 0 0 0 0 855 2410 781 7291;7292;7293;7294 5778;5779 5779 3951 2 ADDIDIEAMLEAPYKK Acetyl (Protein N-term) 1862.8972 0.897181 2410 Q14498 RBM39 RNA-binding protein 39 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 6.71 3.81 2 1 4 1 2 1 1 1 1 94.491 92.256 2 2.4284E-66 114120 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 189.33 165.95 164610000 24061000 136040000 0 0 0 0 0 0 0 1425600 1031600 0 0 421910 1627500 856 2410 781 7295;7296;7297;7298;7299;7300;7301 5780;5781;5782;5783;5784;5785 5781 6 ADDILDLK Unmodified 901.47566 0.47566253 4471 Q9H9E3 COG4 Conserved oligomeric Golgi complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 61.269 61.593 2 0.041222 69477 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 50.04 17.43 25705000 0 0 0 0 0 4744900 0 0 0 0 4314100 7477200 0 3375300 5793400 857 4471 782 7302;7303;7304;7305;7306 5786 5786 1 ADDLDFETGDAGASATFPMQCSALR Acetyl (Protein N-term);Oxidation (M) 2703.1429 0.14286037 1949 P63241;Q6IS14 EIF5A;EIF5AL1 Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-1-like yes no 1 1 0 By MS/MS By MS/MS 10 0 2 1 1 86.376 86.543 3 5.9091E-19 100572 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.546 70.769 24575000 0 0 0 0 0 0 0 0 0 0 15824000 8751200 0 0 0 858 1949 783 7307;7308 5787;5788 5788 3129 2 ADDLDFETGDAGASATFPMQCSALRK Acetyl (Protein N-term);Oxidation (M) 2831.2378 0.23782338 1949 P63241;Q6IS14 EIF5A;EIF5AL1 Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-1-like yes no 1 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.26 3.26 5 1 21 1 3 2 2 2 2 1 2 2 2 2 2 2 2 81.473 80.594 2;3 4.3064E-79 98365 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 135.8 129.16 3766700000 187660000 2509600000 112520000 0 23449000 31353000 21655000 4918500 22165000 109630000 173450000 143270000 25257000 83436000 318340000 859 1949 784 7309;7310;7311;7312;7313;7314;7315;7316;7317;7318;7319;7320;7321;7322;7323;7324;7325;7326;7327;7328;7329;7330;7331;7332;7333;7334;7335 5789;5790;5791;5792;5793;5794;5795;5796;5797;5798;5799;5800;5801;5802;5803;5804;5805;5806;5807 5793 3129 19 ADDLDFETGDAGASATFPMQCSALRK Acetyl (Protein N-term) 2815.2429 0.24290876 1949 P63241;Q6IS14 EIF5A;EIF5AL1 Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-1-like yes no 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.12 3.79 8 2 6 2 7 1 1 2 1 2 87.243 84.212 2;3 6.1276E-127 104391 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 219.58 213.15 3388400000 72162000 3199800000 5180600 0 0 0 0 0 0 11963000 16161000 9179300 0 0 73994000 860 1949 784 7336;7337;7338;7339;7340;7341;7342;7343;7344;7345;7346;7347;7348;7349;7350;7351 5808;5809;5810;5811;5812;5813;5814;5815;5816;5817;5818;5819;5820;5821;5822;5823 5810 16 ADDLEPIMELGR Oxidation (M) 1373.6497 0.6496805 1688 P52564 MAP2K6 Dual specificity mitogen-activated protein kinase kinase 6 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 70.956 71.092 2 0.0046001 81642 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 73.841 58.83 161370000 0 0 0 0 10833000 19205000 16772000 8229100 9467200 17740000 15295000 19468000 15710000 10370000 18282000 861 1688 785 7352;7353;7354;7355;7356;7357;7358;7359;7360;7361;7362 5824;5825;5826;5827;5828 5825 2732 0 ADDLEPIMELGR Unmodified 1357.6548 0.65476588 1688 P52564 MAP2K6 Dual specificity mitogen-activated protein kinase kinase 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.38 81.44 2 0.008723 93772 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.056 49.905 147380000 0 0 0 4218000 5532500 13866000 4401800 9206600 5827900 16971000 20912000 14258000 6398500 12325000 33462000 862 1688 785 7363;7364;7365;7366;7367;7368;7369;7370;7371;7372;7373;7374 5829;5830 5829 2 ADDLEPIMELGRGAYGVVEK Unmodified 2161.0725 0.072519601 1688 P52564 MAP2K6 Dual specificity mitogen-activated protein kinase kinase 6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 92.029 86.862 3 4.8994E-05 109380 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 61.139 53.565 89306000 57836000 29937000 1532800 0 0 0 0 0 0 0 0 0 0 0 0 863 1688 786 7375;7376;7377 5831;5832 5831 2 ADDLLPLGDQTQDGDFGSR Unmodified 2018.9181 0.91812745 312 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.041 79.095 2 2.4159E-47 91455 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 125.61 109.86 64894000 0 0 0 3831300 3461600 3647100 3570600 5070000 4316000 0 7574000 11763000 4072600 5986200 11602000 864 312 787 7378;7379;7380;7381;7382;7383;7384;7385;7386;7387;7388;7389 5833;5834;5835;5836;5837;5838;5839;5840;5841;5842;5843 5834 11 ADDMPPVQGTVAEHSFLPAEQQGSEDNLK Oxidation (M) 3125.4248 0.42477253 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 77.088 72.961 3 3.4877E-57 91004 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.75 109.9 71547000 0 71547000 0 0 0 0 0 0 0 0 0 0 0 0 0 865 3443 788 7390;7391 5844;5845;5846;5847 5845 4978 4 ADDMPPVQGTVAEHSFLPAEQQGSEDNLK Unmodified 3109.4299 0.42985791 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 0 By MS/MS By MS/MS 5 3.56 1 1 1 2 1 80.067 77.477 3 6.084E-16 96093 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.516 68.356 52617000 0 40957000 0 0 0 0 0 0 0 0 0 0 0 0 11660000 866 3443 788 7392;7393;7394 5848;5849;5850 5848 3 ADDMSDDQGTSVQSK Unmodified 1582.6417 0.64169459 2234 Q13111 CHAF1A Chromatin assembly factor 1 subunit A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 15.923 16.133 2 6.5266E-28 15717 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 138.75 135.62 47768000 0 0 0 2798300 0 2219000 2499600 3122100 0 3753200 6702400 10403000 6584700 0 9686100 867 2234 789 7395;7396;7397;7398;7399;7400;7401;7402;7403;7404 5851;5852;5853;5854;5855;5856;5857;5858;5859;5860 5859 10 ADDMSDDQGTSVQSK Oxidation (M) 1598.6366 0.63660921 2234 Q13111 CHAF1A Chromatin assembly factor 1 subunit A yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 8.1314 8.3995 2 0.00050017 6760 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 66.595 55.444 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 868 2234 789 7405;7406 5861;5862 5862 3631 2 ADDPLRLDQELQQPQTQEK Unmodified 2251.1081 0.10805348 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.411 67.492 3 2.0541E-08 77427 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 81.639 68.976 152670000 0 0 0 4053500 5610100 10534000 8367400 5083600 5843800 10814000 16124000 17738000 22908000 18276000 27317000 869 2203 790 7407;7408;7409;7410;7411;7412;7413;7414;7415;7416;7417;7418 5863;5864;5865;5866;5867;5868;5869;5870;5871;5872;5873;5874;5875;5876 5863 14 ADDPSAADRNVEIWK Acetyl (Protein N-term) 1727.8115 0.81147753 1902 P62495 ETF1 Eukaryotic peptide chain release factor subunit 1 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 4 1 1 1 1 1 1 1 1 1 1 1 1 1 69.33 67.982 2;3 4.042E-58 84907 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 176.99 134.6 2395600000 0 1738700000 4108600 27086000 25625000 67270000 38417000 40643000 40640000 62238000 68890000 74369000 44752000 59975000 102930000 870 1902 791 7419;7420;7421;7422;7423;7424;7425;7426;7427;7428;7429;7430;7431;7432;7433;7434;7435 5877;5878;5879;5880;5881;5882;5883;5884;5885;5886;5887;5888;5889;5890;5891 5880 13 ADDPSSYMEVVQAANTSGNWEELVK Oxidation (M) 2755.2283 0.22830455 2040 Q00610 CLTC Clathrin heavy chain 1 yes yes 0 1 0 By MS/MS By MS/MS 2.4 0.49 3 2 1 4 89.985 85.116 2;3 4.6472E-206 106565 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 224.33 215.53 548670000 13465000 535210000 0 0 0 0 0 0 0 0 0 0 0 0 0 871 2040 792 7436;7437;7438;7439;7440 5892;5893;5894;5895;5896;5897 5893 3296 6 ADDPSSYMEVVQAANTSGNWEELVK Unmodified 2739.2334 0.23338993 2040 Q00610 CLTC Clathrin heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 94.941 90.259 2;3 1.4495E-107 113383 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 151.01 144.55 982350000 6471100 957360000 18516000 0 0 0 0 0 0 0 0 0 0 0 0 872 2040 792 7441;7442;7443;7444 5898;5899;5900;5901;5902;5903 5899 6 ADDPTMGEGPDK Unmodified 1231.5027 0.50268192 1857 P61764 STXBP1 Syntaxin-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 20.785 20.988 2 2.5049E-05 20559 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 93.258 65.929 49791000 0 0 0 0 1816200 7671800 3568000 0 2507300 4935300 6799000 0 3962100 6964000 11567000 873 1857 793 7445;7446;7447;7448;7449;7450;7451;7452;7453;7454 5904;5905;5906;5907;5908;5909;5910;5911;5912;5913;5914 5911 11 ADDPTMGEGPDK Oxidation (M) 1247.4976 0.49759654 1857 P61764 STXBP1 Syntaxin-binding protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.11 3.54 1 1 7 2 1 1 1 1 1 1 1 22.986 23.225 2 6.3082E-10 92331 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 124.67 92.254 60540000 36952000 0 0 2338400 1149800 5520000 0 0 0 5878200 3133000 3482600 0 2086000 0 874 1857 793 7455;7456;7457;7458;7459;7460;7461;7462;7463 5915;5916;5917;5918 5915 3010 3 ADDPYAHLSK Unmodified 1115.5247 0.52473799 3421 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 1 1 6 2 1 1 1 1 1 1 27.765 26.784 2 0.0023408 34596 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.98 55.935 183690000 0 122150000 0 0 0 0 0 0 0 10604000 13873000 0 14201000 10713000 12149000 875 3421 794 7464;7465;7466;7467;7468;7469;7470;7471 5919;5920;5921;5922;5923;5924;5925 5920 6 ADDQGCIEEQGVEDSANEDSVDAKPDR Acetyl (Protein N-term) 2990.2319 0.23194596 1762 P55210 CASP7 Caspase-7;Caspase-7 subunit p20;Caspase-7 subunit p11 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 55.182 55.566 3 4.6487E-42 62893 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 91.813 91.495 28308000 0 0 0 0 0 4405200 0 0 0 0 5872600 7912500 3005100 0 7112600 876 1762 795 7472;7473;7474;7475;7476 5926;5927;5928;5929 5928 4 ADDTSAATIEK Unmodified 1120.5248 0.52479757 5123 Q9Y2W2 WBP11 WW domain-binding protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.31 2.4 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 18.417 18.612 2 1.3844E-05 92789 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 128.27 78.851 229480000 0 0 0 18362000 22079000 17606000 17926000 17790000 14157000 19894000 15066000 32121000 17757000 16074000 20653000 877 5123 796 7477;7478;7479;7480;7481;7482;7483;7484;7485;7486;7487;7488;7489 5930;5931;5932;5933;5934;5935;5936;5937;5938;5939;5940;5941;5942;5943;5944;5945;5946 5937 16 ADDVDQQQTTNTVEEPLDLIR Acetyl (Protein N-term) 2441.1558 0.15579154 1891 P62310 LSM3 U6 snRNA-associated Sm-like protein LSm3 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 2 2 1 2 2 2 2 2 2 89.27 89.374 2;3 5.8289E-48 103853 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 148.72 129.89 161040000 0 0 0 0 11864000 8723700 6897000 9469900 1969600 10354000 20979000 24281000 6059400 16019000 44426000 878 1891 797 7490;7491;7492;7493;7494;7495;7496;7497;7498;7499;7500;7501;7502;7503;7504;7505;7506;7507;7508;7509;7510 5947;5948;5949;5950;5951;5952;5953;5954;5955;5956;5957;5958;5959;5960;5961;5962;5963 5962 17 ADEALAGLDEGALRK Acetyl (Protein N-term) 1569.7999 0.79985021 1726 P53814 SMTN Smoothelin yes yes 1 0 1 By MS/MS 3 0 1 1 80.969 77.669 2 0.0016083 93089 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 73.435 56.522 3587300 0 3587300 0 0 0 0 0 0 0 0 0 0 0 0 0 879 1726 798 7511 5964 5964 1 ADEAPRK Acetyl (Protein N-term) 827.41373 0.41373097 2331 Q13619 CUL4A Cullin-4A yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 8.0209 7.1737 2 0.018999 9515 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.381 43.01 612380000 54587000 491230000 0 0 4121200 9138200 6913800 6899900 5407000 6446400 19776000 0 0 7859500 0 880 2331 799 7512;7513;7514;7515;7516;7517;7518;7519;7520;7521;7522;7523;7524;7525 5965;5966;5967;5968;5969;5970;5971;5972;5973;5974;5975;5976;5977 5971 13 ADEASELACPTPK Unmodified 1387.6289 0.62894506 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 38.477 37.361 2 1.0502E-21 48337 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 146.11 128.2 1438600000 34173000 53517000 2886500 48443000 50744000 164090000 73321000 65211000 39120000 119830000 135340000 183290000 88129000 119840000 260710000 881 1565 800 7526;7527;7528;7529;7530;7531;7532;7533;7534;7535;7536;7537;7538;7539;7540;7541 5978;5979;5980;5981;5982;5983;5984;5985;5986;5987;5988;5989;5990;5991;5992;5993;5994 5985 17 ADEATRRVVSEIPVLK Acetyl (Protein N-term) 1824.0105 0.010511692 5159 Q9Y3C8 UFC1 Ubiquitin-fold modifier-conjugating enzyme 1 yes yes 1 0 2 By MS/MS By MS/MS 2 0 2 1 1 88.191 81.705 3 0.00024799 103426 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 47.545 24.939 105040000 10487000 94550000 0 0 0 0 0 0 0 0 0 0 0 0 0 882 5159 801 7542;7543 5995;5996 5995 2 ADEDPALFQSVK Unmodified 1318.6405 0.64049603 1554 P48739 PITPNB Phosphatidylinositol transfer protein beta isoform yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 3 9 1 1 1 1 1 1 1 1 1 1 1 1 62.628 61.186 2 1.3163E-05 80242 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.39 95.127 800240000 24181000 597480000 1643500 8974600 8629500 24161000 13323000 0 0 14042000 25134000 20186000 0 18978000 43509000 883 1554 802 7544;7545;7546;7547;7548;7549;7550;7551;7552;7553;7554;7555 5997;5998;5999 5999 3 ADEDPIMGFHQMFLLK Oxidation (M) 1906.8957 0.89574121 1867 P61970 NUTF2 Nuclear transport factor 2 yes yes 0 1 0 By MS/MS 2 0 1 1 95.088 90.224 3 3.0626E-11 111892 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.83 97.917 69600000 0 69600000 0 0 0 0 0 0 0 0 0 0 0 0 0 884 1867 803 7556 6000 6000 3017 1 ADEDPIMGFHQMFLLK Unmodified 1890.9008 0.90082659 1867 P61970 NUTF2 Nuclear transport factor 2 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 96.642 91.255 3 1.4383E-07 114813 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.76 95.637 106850000 46293000 60554000 0 0 0 0 0 0 0 0 0 0 0 0 0 885 1867 803 7557;7558;7559 6001;6002 6001 2 ADEEEMLDNLPEAGDSR Oxidation (M) 1905.7898 0.78981539 4547 Q9NPD8 UBE2T Ubiquitin-conjugating enzyme E2 T yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 55.991 55.977 2 7.9215E-11 63716 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 90.926 87.604 25850000 0 0 0 2235800 2163200 4479400 3509700 0 2260900 5091400 3039900 0 0 3070000 0 886 4547 804 7560;7561;7562;7563;7564;7565;7566;7567;7568 6003;6004;6005;6006;6007;6008;6009 6003 5959 7 ADEEEMLDNLPEAGDSR Unmodified 1889.7949 0.79490077 4547 Q9NPD8 UBE2T Ubiquitin-conjugating enzyme E2 T yes yes 0 0 0 By MS/MS By matching By matching By MS/MS 10 0 4 1 1 1 1 71.399 71.575 2 1.2771E-09 81853 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.37 102.22 15177000 0 0 0 0 0 4321300 0 1740100 0 3372800 0 0 0 0 5742400 887 4547 804 7569;7570;7571;7572 6010;6011 6011 2 ADEEEMLDNLPEAGDSRVHNSTQK Unmodified 2684.1984 0.19840141 4547 Q9NPD8 UBE2T Ubiquitin-conjugating enzyme E2 T yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 68.467 61.911 3;4 0.00025718 81994 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.509 51.431 77111000 35974000 29550000 11587000 0 0 0 0 0 0 0 0 0 0 0 0 888 4547 805 7573;7574;7575;7576 6012;6013;6014 6013 3 ADEELEALRR Acetyl (Protein N-term) 1242.6204 0.62042929 207 O14737 PDCD5 Programmed cell death protein 5 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 64.498 63.755 2 2.4124E-10 72998 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 161.79 139.7 509200000 0 45404000 0 9814600 9108600 9134100 18131000 14922000 0 18416000 67910000 90369000 13689000 72690000 139620000 889 207 806 7577;7578;7579;7580;7581;7582;7583;7584;7585;7586;7587;7588;7589 6015;6016;6017;6018;6019;6020;6021;6022 6019 4 ADEELEALRRQR Acetyl (Protein N-term) 1526.7801 0.78011783 207 O14737 PDCD5 Programmed cell death protein 5 yes yes 1 0 2 By matching By MS/MS 2 0 3 1 2 60.701 59.504 3 0.0065594 74188 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 45.915 39.884 9668800 88479 0 9580400 0 0 0 0 0 0 0 0 0 0 0 0 890 207 807 7590;7591;7592 6023 6023 1 ADEEPTPADGR Unmodified 1156.4996 0.49964545 3740 Q96AT1 KIAA1143 Uncharacterized protein KIAA1143 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 13.314 13.595 2 0.00020504 12247 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.15 87.367 20888000 0 0 0 0 0 0 834680 905510 0 0 3009000 5019600 0 2855000 8264500 891 3740 808 7593;7594;7595;7596;7597;7598 6024;6025;6026;6027 6024 4 ADEGISFR Unmodified 893.4243 0.42429566 2131 Q06830 PRDX1 Peroxiredoxin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 39.794 38.651 2 2.0798E-07 43114 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 161.12 98.407 10710000000 295480000 4307300000 110240000 435910000 182660000 238830000 262200000 186980000 166720000 313390000 1009900000 744100000 227720000 606020000 1623000000 892 2131 809 7599;7600;7601;7602;7603;7604;7605;7606;7607;7608;7609;7610;7611;7612;7613;7614 6028;6029;6030;6031;6032;6033;6034;6035;6036;6037;6038;6039;6040;6041;6042;6043;6044 6030 15 ADEGISFRGLFIIDDK Unmodified 1794.9152 0.91521432 2131 Q06830 PRDX1 Peroxiredoxin-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.41 0.558 1 15 13 20 8 1 98.72 93.921 2;3 2.6578E-44 113322 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 190.35 155.66 2353000000 2069400000 270960000 12637000 0 0 0 0 0 0 0 0 0 0 0 0 893 2131 810 7615;7616;7617;7618;7619;7620;7621;7622;7623;7624;7625;7626;7627;7628;7629;7630;7631;7632;7633;7634;7635;7636;7637;7638;7639;7640;7641;7642;7643 6045;6046;6047;6048;6049;6050;6051;6052;6053;6054;6055;6056;6057;6058;6059;6060;6061;6062;6063;6064;6065;6066;6067;6068;6069;6070;6071;6072;6073;6074;6075;6076;6077;6078;6079;6080;6081;6082;6083;6084;6085;6086;6087;6088;6089;6090;6091;6092;6093;6094;6095;6096;6097 6083 53 ADEHVIDQGDDGDNFYVIER Unmodified 2306.0087 0.0087333705 990 P13861 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 71.441 71.649 3 0.0086572 81796 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.992 26.946 37564000 0 0 0 0 0 4359600 0 0 2364800 4386400 5171700 6375200 0 3224100 11683000 894 990 811 7644;7645;7646;7647;7648;7649;7650;7651 6098;6099;6100;6101 6098 3 ADEHVIDQGDDGDNFYVIERGTYDILVTK Unmodified 3296.5473 0.54733051 990 P13861 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 93.259 87.431 4 8.3256E-40 111439 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 100.95 98.838 66032000 66032000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 895 990 812 7652;7653 6102;6103 6103 2 ADEPMEH Oxidation (M) 843.30688 0.30688264 1193 P25786 PSMA1 Proteasome subunit alpha type-1 yes yes 0 1 0 By MS/MS 1 0 1 1 106.61 111.87 2 0.011682 92557 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 122.51 122.51 201420000 201420000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 896 1193 813 7654 6104 6104 1726 1 ADEPSSEESDLEIDK Unmodified 1662.7108 0.71082002 1625 P50502;Q8IZP2 ST13;ST13P4 Hsc70-interacting protein;Putative protein FAM10A4 yes no 0 0 0 By MS/MS By matching By MS/MS 7.33 3.77 1 2 1 1 1 46.263 44.052 2 0.0021038 49964 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.121 49.702 12052000 2804500 0 0 0 0 0 0 0 0 0 3610300 0 0 0 5637400 897 1625 814 7655;7656;7657 6105;6106;6107 6106 3 ADETKDEQFEQCVQNFNK Unmodified 2228.9644 0.96442571 162 O00499 BIN1 Myc box-dependent-interacting protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 60.771 59.778 3 5.2744E-20 75548 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.21 106.15 105680000 0 52480000 0 4892600 4682600 0 4697300 0 0 6088800 6471100 7703500 0 7472300 11192000 898 162 815 7658;7659;7660;7661;7662;7663;7664;7665;7666;7667 6108;6109;6110 6108 3 ADEVAPAK Unmodified 799.40758 0.40758296 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 0 By MS/MS 10 0 1 1 7.6393 7.6142 2 0.029724 5846 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 89.55 40.191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 899 1714 816 7668 6111 6111 1 ADEVAPAKK Unmodified 927.50255 0.50254598 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 1 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 5.7435 5.771 2 0.041487 3588 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 84.568 52.213 42648000 0 0 0 1422700 2318000 1589500 12920000 13296000 8268600 0 0 2833000 0 0 0 900 1714 817 7669;7670;7671;7672;7673;7674;7675 6112;6113 6113 2 ADEVLEILK Unmodified 1028.5754 0.57537657 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 81.12 77.44 2 0.0075125 89290 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.23 45.628 182540000 18595000 145470000 4670700 0 0 0 0 0 0 0 0 0 0 0 13809000 901 528 818 7676;7677;7678;7679;7680;7681;7682;7683;7684;7685;7686;7687;7688;7689;7690;7691 6114;6115;6116;6117;6118;6119;6120;6121;6122;6123;6124;6125;6126;6127;6128;6129 6118 16 ADEWLMK Oxidation (M) 907.41095 0.41095378 1356;1357 P35579;P35580 MYH9;MYH10 Myosin-9;Myosin-10 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 1 2 2 2 2 36.701 36.87 2 0.018543 41653 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 76.847 52.66 921480000 0 0 0 58334000 68994000 85197000 77081000 54640000 69586000 90051000 47119000 116240000 103770000 55128000 95343000 902 1356;1357 819 7692;7693;7694;7695;7696;7697;7698;7699;7700;7701;7702;7703;7704;7705;7706;7707;7708;7709;7710;7711;7712;7713;7714 6130;6131;6132;6133;6134;6135;6136;6137;6138;6139;6140;6141 6141 2066 12 ADEWLMK Unmodified 891.41604 0.41603916 1356;1357 P35579;P35580 MYH9;MYH10 Myosin-9;Myosin-10 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 52.692 52.787 2 0.046674 59495 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 65.803 38.683 1170100000 0 0 0 57151000 68028000 113490000 63380000 80288000 67362000 124360000 156920000 184680000 139420000 115010000 0 903 1356;1357 819 7715;7716;7717;7718;7719;7720;7721;7722;7723;7724;7725 6142 6142 1 ADFAGPSSAGRK Acetyl (Protein N-term) 1204.5836 0.58364985 3267 Q8IXW5 RPAP2 Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 yes yes 1 0 1 By MS/MS By MS/MS By matching By MS/MS By matching 8.4 3.2 1 4 1 1 1 1 1 35.461 34.621 2 0.0075252 43295 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.474 38.24 45930000 0 30588000 0 0 2008900 0 0 3489000 0 0 0 4997400 0 4846400 0 904 3267 820 7726;7727;7728;7729;7730 6143;6144;6145 6143 3 ADFAQACQDAGVR Unmodified 1407.6201 0.62011171 951 P11498 PC Pyruvate carboxylase, mitochondrial yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 40.194 40.796 2 0.0055756 44483 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.741 34.971 7512400 0 0 0 0 0 0 0 0 0 0 2689800 0 0 0 4822600 905 951 821 7731;7732 6146 6146 1 ADFCIIHYAGK Unmodified 1293.6176 0.61759251 1356;1357 P35579;P35580 MYH9;MYH10 Myosin-9;Myosin-10 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.62 3.02 5 24 2 1 2 2 2 2 2 2 2 2 2 2 2 2 2 66.19 65.256 2;3 0.00033528 73902 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 88.819 73.438 3295800000 321420000 41097000 82016000 117880000 110450000 208490000 116790000 92023000 286980000 219070000 258590000 566600000 261480000 237190000 375740000 906 1356;1357 822 7733;7734;7735;7736;7737;7738;7739;7740;7741;7742;7743;7744;7745;7746;7747;7748;7749;7750;7751;7752;7753;7754;7755;7756;7757;7758;7759;7760;7761 6147;6148;6149;6150;6151;6152;6153;6154;6155;6156;6157;6158;6159;6160;6161;6162;6163;6164;6165;6166;6167;6168;6169;6170;6171 6154 17 ADFDDRVSDEEK Acetyl (Protein N-term) 1466.6161 0.61613177 1705 P52907 CAPZA1 F-actin-capping protein subunit alpha-1 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.65 3.61 1 3 2 14 3 2 1 1 1 1 1 1 1 2 1 1 1 1 2 48.754 47.788 2 3.187E-26 50712 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 164.81 148.14 1644600000 126980000 834790000 4275200 55736000 43928000 54473000 44579000 36504000 32355000 50734000 66668000 92474000 48003000 40600000 112470000 907 1705 823 7762;7763;7764;7765;7766;7767;7768;7769;7770;7771;7772;7773;7774;7775;7776;7777;7778;7779;7780;7781 6172;6173;6174;6175;6176;6177;6178;6179;6180;6181;6182;6183;6184;6185;6186;6187;6188;6189;6190;6191;6192;6193;6194;6195;6196;6197;6198;6199;6200;6201;6202;6203;6204 6199 33 ADFDNTVAIHPTSSEELVTLR Unmodified 2314.1441 0.14410464 724 P00390 GSR Glutathione reductase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 2 2 1 83.146 78.493 2;3 3.4072E-24 98579 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 111.66 106.79 900110000 96376000 748650000 55086000 0 0 0 0 0 0 0 0 0 0 0 0 908 724 824 7782;7783;7784;7785;7786 6205;6206;6207;6208;6209 6205 5 ADFDTYDDRAYSSFGGGR Acetyl (Protein N-term) 2040.845 0.84496251 2490 Q15056 EIF4H Eukaryotic translation initiation factor 4H yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.106 76.155 2 4.9202E-72 87931 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 182.33 167.29 215040000 0 0 0 3819400 6162000 6658800 0 10511000 7297000 15828000 33833000 39288000 6327900 20699000 64618000 909 2490 825 7787;7788;7789;7790;7791;7792;7793;7794;7795;7796;7797 6210;6211;6212;6213;6214;6215;6216;6217;6218 6216 9 ADFFEDENGQR Unmodified 1326.5477 0.54765827 670 O95573 ACSL3 Long-chain-fatty-acid--CoA ligase 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 45.667 45.979 2 0.00091841 51455 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 96.034 61.861 167360000 0 0 0 0 0 14442000 11095000 14078000 13004000 15811000 14222000 25740000 18737000 20522000 19715000 910 670 826 7798;7799;7800;7801;7802;7803;7804;7805;7806;7807 6219;6220;6221;6222;6223;6224;6225;6226 6224 1 ADFGISAGQFVAVVWDK Acetyl (Protein N-term) 1850.9203 0.9202997 2875 Q6FI81 CIAPIN1 Anamorsin yes yes 1 0 0 By MS/MS 2 0 1 1 100.73 98.353 2 0.0027518 118820 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 43.991 31.224 1123200 0 0 1123200 0 0 0 0 0 0 0 0 0 0 0 0 911 2875 827 7808 6227 6227 1 ADFIRESSEAQVQK Unmodified 1606.7951 0.79509919 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 9.62 1.7 1 20 1 1 1 2 2 2 2 2 2 2 2 1 1 38.584 38.612 2;3 4.5E-08 42740 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 74.733 63.119 364960000 0 0 22972000 16984000 16963000 25744000 47622000 35556000 24899000 35669000 43514000 41752000 40470000 4919100 7897800 912 5216 828 7809;7810;7811;7812;7813;7814;7815;7816;7817;7818;7819;7820;7821;7822;7823;7824;7825;7826;7827;7828;7829 6228;6229;6230;6231;6232;6233;6234;6235;6236;6237;6238;6239;6240 6236 12 ADFNLADFECEEDPFDNLELK Unmodified 2530.0846 0.08460043 4758 Q9NZ09 UBAP1 Ubiquitin-associated protein 1 yes yes 0 0 0 By MS/MS 3 0 1 1 97.366 94.058 2 0.0030581 112796 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 57.679 52.696 2570200 0 2570200 0 0 0 0 0 0 0 0 0 0 0 0 0 913 4758 829 7830 6241 6241 1 ADFPAGIPECGTDALR Unmodified 1688.7828 0.78281994 1210 P26640 VARS Valine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.538 76.596 2 0.00035058 87954 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.543 72.888 124300000 0 0 0 3774600 4432100 15224000 5843300 6372200 4369300 12562000 13234000 12696000 5274400 15348000 25173000 914 1210 830 7831;7832;7833;7834;7835;7836;7837;7838;7839;7840;7841;7842 6242;6243;6244;6245;6246;6247;6248;6249;6250;6251;6252 6245 11 ADFQGISPER Unmodified 1118.5356 0.53563702 1859 P61803 DAD1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 44.57 44.045 2 0.033145 49837 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 42.19 19.119 14663000 0 0 0 10151000 4512500 0 0 0 0 0 0 0 0 0 0 915 1859 831 7843;7844 6253 6253 1 ADFQYQESNLR Unmodified 1369.6262 0.62624295 2729 Q5HYJ3 FAM76B Protein FAM76B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 46.826 47.063 2 0.0076229 52890 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 64.04 44.279 47719000 0 0 0 4474400 0 0 4254300 3452100 4215200 4977800 5476000 8398400 0 4484700 7985700 916 2729 832 7845;7846;7847;7848;7849;7850;7851;7852;7853 6254;6255;6256;6257 6256 4 ADFSGMSQTDLSLSK Unmodified 1585.7294 0.72938739 1344 P35237 SERPINB6 Serpin B6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.06 3.8 5 1 10 1 4 1 1 1 1 1 1 1 1 1 1 1 70.85 69.018 2 2.3711E-39 86525 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 181.49 170.27 3192300000 57375000 3033700000 11098000 0 0 3483100 2289900 3259500 2646900 4301800 13338000 8848500 3373800 9620100 39021000 917 1344 833 7854;7855;7856;7857;7858;7859;7860;7861;7862;7863;7864;7865;7866;7867;7868;7869 6258;6259;6260;6261;6262;6263;6264;6265;6266;6267;6268;6269;6270;6271;6272;6273 6260 16 ADFSGMSQTDLSLSK Oxidation (M) 1601.7243 0.72430201 1344 P35237 SERPINB6 Serpin B6 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.38 2.84 9 2 2 2 9 1 1 61.095 55.215 2 1.2643E-72 66428 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 198.57 185.96 453530000 51918000 401620000 0 0 0 0 0 0 0 0 0 0 0 0 0 918 1344 833 7870;7871;7872;7873;7874;7875;7876;7877;7878;7879;7880;7881;7882 6274;6275;6276;6277;6278;6279;6280;6281;6282;6283;6284;6285;6286;6287;6288;6289 6274 2034 16 ADFSPFGNSQGPSR Unmodified 1465.6586 0.65860571 4370 Q9H2M9 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.668 58.784 2 0.00013863 66862 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 89.403 85.516 151650000 0 0 0 6931000 6841600 12234000 9901500 10446000 6578900 16421000 14637000 16273000 16021000 13895000 21468000 919 4370 834 7883;7884;7885;7886;7887;7888;7889;7890;7891;7892;7893;7894 6290;6291;6292;6293;6294;6295;6296;6297;6298;6299;6300;6301 6292 12 ADGAEAKPAE Unmodified 957.44034 0.44033966 1356 P35579 MYH9 Myosin-9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.6422 6.7664 2 0.033356 4963 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 107.9 69.111 175240000 0 0 0 12452000 23153000 13509000 33622000 21799000 13184000 7580300 13208000 10462000 10442000 5827600 10006000 920 1356 835 7895;7896;7897;7898;7899;7900;7901;7902;7903;7904;7905;7906 6302;6303;6304;6305;6306;6307;6308 6305 5 ADGATSDDLDLHDDR Unmodified 1614.6758 0.67577191 2136 Q07157 TJP1 Tight junction protein ZO-1 yes yes 0 0 0 By MS/MS By matching By matching By matching 10 0 4 1 1 1 1 34.329 34.376 3 0.034698 38316 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 22.846 16.815 9573800 0 0 0 2378900 0 0 0 0 2180300 2783900 0 0 2230700 0 0 921 2136 836 7907;7908;7909;7910 6309 6309 1 ADGELNVDSLITR Acetyl (Protein N-term) 1443.7205 0.72053726 1873 P62140 PPP1CB Serine/threonine-protein phosphatase PP1-beta catalytic subunit yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 87.233 87.3 2 3.9303E-13 101213 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 126.19 112.38 153730000 0 0 0 3734000 8472300 9517400 8609900 9987200 7875600 15980000 19054000 19078000 0 15603000 35819000 922 1873 837 7911;7912;7913;7914;7915;7916;7917;7918;7919;7920;7921 6310;6311;6312;6313;6314;6315;6316;6317;6318;6319 6311 10 ADGGSERADGR Acetyl (Protein N-term) 1131.4905 0.49047775 130 O00232 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.7789 6.9025 2 2.017E-05 5132 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 125.97 93.614 64228000 0 0 0 3905700 5282800 6851600 3520500 3129600 4680600 7003600 12242000 7415400 2258400 1878200 6059600 923 130 838 7922;7923;7924;7925;7926;7927;7928;7929;7930;7931;7932;7933 6320;6321;6322;6323;6324;6325;6326;6327;6328 6324 9 ADGGSERADGRIVK Acetyl (Protein N-term) 1471.7379 0.73791866 130 O00232 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 1 0 2 By MS/MS 2 0 1 1 24.541 21.58 3 0.0018731 27358 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 53.754 39.308 73955000 0 0 73955000 0 0 0 0 0 0 0 0 0 0 0 0 924 130 839 7934 6329 6329 1 ADGGTQVIDTK Unmodified 1103.5459 0.54586736 890 P09622 DLD Dihydrolipoyl dehydrogenase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 21.026 21.349 2 0.00037976 20953 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.298 60.509 28118000 0 0 0 3458000 0 2990300 0 0 0 0 4135100 5095700 0 4008800 8429900 925 890 840 7935;7936;7937;7938;7939;7940 6330;6331;6332;6333;6334 6330 5 ADGHAATLVMK Oxidation (M) 1128.5597 0.55974328 2005 P83436 COG7 Conserved oligomeric Golgi complex subunit 7 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 19.438 16.351 2 0.00063904 21294 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.143 51.748 21905000 0 16768000 5137100 0 0 0 0 0 0 0 0 0 0 0 0 926 2005 841 7941;7942 6335 6335 3254 1 ADGHAATLVMK Unmodified 1112.5648 0.56482866 2005 P83436 COG7 Conserved oligomeric Golgi complex subunit 7 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 33.118 29.178 2 6.5873E-10 38593 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 148.32 104.51 24767000 0 19067000 5700600 0 0 0 0 0 0 0 0 0 0 0 0 927 2005 841 7943;7944 6336;6337 6336 2 ADGILVPGGFGIR Unmodified 1270.7034 0.70337105 4598 Q9NRF8 CTPS2 CTP synthase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 84.041 84.087 2 0.0029403 96976 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.928 58.721 79098000 0 0 0 2914900 3770700 7125700 4007100 6515200 0 0 11701000 12014000 0 7357900 23691000 928 4598 842 7945;7946;7947;7948;7949;7950;7951;7952;7953;7954 6338;6339;6340;6341;6342;6343;6344 6339 7 ADGLLFHWMGR Oxidation (M) 1317.6288 0.6288259 5312 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 2 1 1 1 1 1 1 66.184 66.087 2 0.01624 76517 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 40.987 17.464 + 26308000 0 0 0 4392000 2553100 2870400 0 0 0 3331200 4260500 0 3080400 0 5820500 929 5312 843 7955;7956;7957;7958;7959;7960;7961;7962 6345 6345 6713 1 ADGNQLTLEER Unmodified 1244.5997 0.59969384 2995 Q6YHK3 CD109 CD109 antigen yes yes 0 0 0 By MS/MS 10 0 1 1 36.682 37.429 2 0.014944 40885 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.434 32.035 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 930 2995 844 7963 6346 6346 1 ADGNQLTLEERR Unmodified 1400.7008 0.70080487 2995 Q6YHK3 CD109 CD109 antigen yes yes 0 0 1 By matching By MS/MS By matching 10 0 3 1 1 1 29.577 29.969 3 0.031028 31998 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 27.993 16.888 26654000 0 0 0 0 0 0 0 0 0 6561000 0 12831000 0 7261800 0 931 2995 845 7964;7965;7966 6347 6347 1 ADGQMPFSCHYPSR Acetyl (Protein N-term) 1693.6977 0.6977101 4948 Q9UJY1 HSPB8 Heat shock protein beta-8 yes yes 1 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 65.568 65.852 2 0.00063314 75796 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 61.435 55.712 24646000 0 0 0 0 0 2408400 0 0 0 0 3889700 5420500 3104800 0 9822200 932 4948 846 7967;7968;7969;7970;7971;7972 6348;6349 6349 2 ADGQVAELLLR Acetyl (Protein N-term) 1225.6667 0.6666512 5090 Q9Y285 FARSA Phenylalanine--tRNA ligase alpha subunit yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 92.934 92.418 2 1.42E-17 112522 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 175.41 166.66 410240000 0 131200000 0 8101600 16303000 18848000 16089000 18547000 16000000 29262000 29695000 31140000 20423000 29361000 45265000 933 5090 847 7973;7974;7975;7976;7977;7978;7979;7980;7981;7982;7983;7984;7985;7986 6350;6351;6352;6353;6354;6355;6356;6357;6358;6359;6360;6361;6362;6363;6364;6365;6366;6367;6368;6369;6370;6371 6357 22 ADGSLTGGGLEAAAMAPER Acetyl (Protein N-term);Oxidation (M) 1830.8418 0.84179138 3427 Q8NEM2 SHCBP1 SHC SH2 domain-binding protein 1 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 2 1 1 1 1 1 1 1 1 1 1 74.107 74.199 2 3.6999E-51 85627 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 142.85 128.59 48314000 0 0 0 3555100 0 3004800 4875500 0 4685700 5142600 5869500 7137800 5528900 4648600 3865900 934 3427 848 7987;7988;7989;7990;7991;7992;7993;7994;7995;7996;7997;7998 6372;6373;6374;6375;6376;6377;6378;6379;6380;6381 6379 4972 10 ADGSLTGGGLEAAAMAPER Acetyl (Protein N-term) 1814.8469 0.84687676 3427 Q8NEM2 SHCBP1 SHC SH2 domain-binding protein 1 yes yes 1 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 80.572 80.569 2 3.972E-49 92882 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 134.88 118.75 19943000 0 0 0 1608200 0 4882300 2599300 0 0 0 0 0 0 0 10853000 935 3427 848 7999;8000;8001;8002 6382;6383;6384 6383 3 ADGSQMAEER Unmodified 1092.4506 0.45058677 2831 Q5VZE5 NAA35 N-alpha-acetyltransferase 35, NatC auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 10.628 10.756 2 0.00056703 9241 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 129.38 99.197 66713000 0 0 0 0 3255100 3248000 1362900 1045300 681300 13927000 18601000 24593000 0 0 0 936 2831 849 8003;8004;8005;8006;8007;8008;8009;8010;8011 6385;6386;6387;6388;6389;6390;6391 6389 6 ADGTATAPPPR Unmodified 1052.5251 0.52507234 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.399 12.55 2 0.0012018 11806 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 74.376 48.817 124570000 0 0 0 6180900 5901900 14994000 8166500 7004200 5948400 14164000 9498000 15979000 10610000 11281000 14844000 937 3119 850 8012;8013;8014;8015;8016;8017;8018;8019;8020;8021;8022;8023 6392;6393;6394;6395;6396;6397;6398;6399 6392 8 ADGTSLDFSTYR Unmodified 1331.5994 0.59935949 3453 Q8NG31 CASC5 Protein CASC5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 60.822 60.888 2 0.020245 69413 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 40.589 28.382 4691600 0 0 0 0 0 2301800 2389800 0 0 0 0 0 0 0 0 938 3453 851 8024;8025;8026 6400;6401;6402 6401 3 ADGVHTVEPTEAGDYK Unmodified 1687.7689 0.76894402 2293 Q13445 TMED1 Transmembrane emp24 domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 36.654 35.707 3 0.00019496 39643 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 50.324 45.523 237110000 5307400 112350000 0 9212000 8711800 7860500 8552600 8948900 8692500 9315300 11285000 11193000 9379200 11869000 14434000 939 2293 852 8027;8028;8029;8030;8031;8032;8033;8034;8035;8036;8037;8038;8039;8040;8041 6403;6404;6405;6406;6407;6408;6409;6410 6404 4 ADGVVEGIDVNGPK Unmodified 1368.6885 0.68850885 598 O94888 UBXN7 UBX domain-containing protein 7 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 60.995 54.684 2 0.00082324 70586 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.338 74.219 250970000 10055000 240910000 0 0 0 0 0 0 0 0 0 0 0 0 0 940 598 853 8042;8043;8044 6411;6412;6413 6411 3 ADGYEPPVQESV Unmodified 1289.5776 0.57756142 1842 P61247 RPS3A 40S ribosomal protein S3a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 58.158 58.229 2 0.00047839 66231 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 79.16 74.862 222630000 0 0 0 17413000 21944000 14756000 14744000 14851000 11434000 18189000 28711000 33594000 26773000 20221000 0 941 1842 854 8045;8046;8047;8048;8049;8050;8051;8052;8053;8054;8055 6414;6415;6416;6417;6418;6419;6420;6421;6422 6416 8 ADGYNQPDSK Unmodified 1093.4676 0.46761704 322;407 O43390;O60506 HNRNPR;SYNCRIP Heterogeneous nuclear ribonucleoprotein R;Heterogeneous nuclear ribonucleoprotein Q no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 8.2105 8.0409 2 0.0093306 6304 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 57.96 53.942 43109000 7263000 0 0 2917200 1799200 3052600 2380100 2693200 3742400 1938300 4255200 3728000 2947200 1944500 4448600 942 322;407 855 8056;8057;8058;8059;8060;8061;8062;8063;8064;8065;8066;8067;8068 6423;6424;6425;6426;6427;6428;6429;6430;6431 6431 9 ADGYVDNLAEAVDLLLQHADK Unmodified 2269.1226 0.12264092 4312 Q9H008 LHPP Phospholysine phosphohistidine inorganic pyrophosphate phosphatase yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 102.43 98.112 3 3.1993E-10 117287 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 72.771 68.743 24216000 0 24216000 0 0 0 0 0 0 0 0 0 0 0 0 0 943 4312 856 8069;8070;8071 6432;6433;6434 6434 3 ADGYVLEGK Unmodified 950.47091 0.4709115 1877 P62241 RPS8 40S ribosomal protein S8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.118 32.305 2 0.0035398 35371 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 94.85 74.291 1164800000 0 0 0 61056000 71213000 58953000 66436000 66074000 55920000 88888000 116680000 196970000 133560000 101530000 147550000 944 1877 857 8072;8073;8074;8075;8076;8077;8078;8079;8080;8081;8082;8083 6435;6436;6437;6438;6439;6440;6441;6442;6443;6444;6445;6446;6447 6435 10 ADHDFVVQEDFMK Unmodified 1579.6977 0.69769333 1898 P62333 PSMC6 26S protease regulatory subunit 10B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 2 1 1 1 70.525 70.594 2;3 0.0027166 81042 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 50.897 41.097 106010000 0 0 0 2422800 4179000 10527000 0 0 0 15958000 19615000 26762000 3310000 4657400 18582000 945 1898 858 8084;8085;8086;8087;8088;8089;8090;8091;8092;8093 6448;6449;6450;6451;6452;6453 6448 5 ADHDFVVQEDFMK Oxidation (M) 1595.6926 0.69260795 1898 P62333 PSMC6 26S protease regulatory subunit 10B yes yes 0 1 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 2 2 2 1 1 1 56.605 56.829 2;3 2.8332E-08 64146 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 104.59 87.922 281610000 0 0 0 14136000 0 4867500 9000100 15211000 9567100 51751000 59983000 73149000 9971700 10457000 23519000 946 1898 858 8094;8095;8096;8097;8098;8099;8100;8101;8102;8103;8104;8105;8106;8107 6454;6455;6456;6457;6458;6459 6457 3072 3 ADHEQQIK Unmodified 967.47231 0.47230849 5278 Q9Y6D9 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 11.375 8.0406 2 0.021383 11112 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.699 26.094 59031000 0 59031000 0 0 0 0 0 0 0 0 0 0 0 0 0 947 5278 859 8108;8109 6460 6460 1 ADHGEPIGR Unmodified 950.45699 0.45699277 862 P08238 HSP90AB1 Heat shock protein HSP 90-beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 8.3497 8.4796 2 1.8804E-21 6850 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 193.16 165.05 1557800000 0 0 0 77903000 39959000 87752000 55201000 59486000 49947000 124140000 363140000 137280000 129160000 85869000 347920000 948 862 860 8110;8111;8112;8113;8114;8115;8116;8117;8118;8119;8120;8121 6461;6462;6463;6464;6465;6466;6467;6468;6469;6470;6471;6472;6473;6474;6475;6476 6472 14 ADHGEPIGRGTK Unmodified 1236.6211 0.62109799 862 P08238 HSP90AB1 Heat shock protein HSP 90-beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS 7 3.77 5 2 11 3 2 2 1 1 1 1 1 1 1 1 1 1 1 7.4128 6.2476 2;3 4.5448E-14 9125 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 133.05 113.81 2279400000 1766000000 62458000 361370000 4328200 3598800 5592900 11140000 7699700 11321000 7213700 13632000 8464600 7114100 9460500 0 949 862 861 8122;8123;8124;8125;8126;8127;8128;8129;8130;8131;8132;8133;8134;8135;8136;8137;8138;8139 6477;6478;6479;6480;6481;6482;6483;6484;6485;6486;6487;6488;6489 6483 10 ADHPPAEVTSHAASGAK Unmodified 1644.7856 0.78559713 4893 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 16.001 16.39 3 0.026706 15405 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 27.149 14.031 18008000 0 0 0 0 0 0 0 0 0 0 3427300 7116700 3214000 4249700 0 950 4893 862 8140;8141;8142;8143 6490 6490 1 ADHSFSDGVPSDSVEAAK Acetyl (Protein N-term) 1859.8174 0.81735077 4057 Q99733 NAP1L4 Nucleosome assembly protein 1-like 4 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 4 2 22 2 3 1 2 2 2 2 2 2 2 2 1 2 2 1 56.683 55.821 2;3 3.3773E-207 64310 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 273.72 258.18 904090000 56862000 161870000 0 33714000 27070000 33247000 35497000 41485000 26877000 46869000 81687000 76657000 56532000 75399000 150330000 951 4057 863 8144;8145;8146;8147;8148;8149;8150;8151;8152;8153;8154;8155;8156;8157;8158;8159;8160;8161;8162;8163;8164;8165;8166;8167;8168;8169;8170;8171 6491;6492;6493;6494;6495;6496;6497;6498;6499;6500;6501;6502;6503;6504;6505;6506 6506 16 ADHTLSSLEPAYSAK Unmodified 1588.7733 0.77330111 2822 Q5VW32 BROX BRO1 domain-containing protein BROX yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 1 3 2 56.939 51.684 2;3 1.8656E-40 64784 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 113.76 103.7 478450000 15747000 426890000 35812000 0 0 0 0 0 0 0 0 0 0 0 0 952 2822 864 8172;8173;8174;8175;8176;8177 6507;6508;6509;6510;6511 6511 5 ADHVQSLAQLENLCK Acetyl (Protein N-term) 1766.8621 0.8621329 4923 Q9UIA9 XPO7 Exportin-7 yes yes 1 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.86 3.4 2 2 10 3 1 1 1 2 1 1 1 1 1 1 81.343 80.347 2;3 1.1396E-148 98932 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 236.92 203.04 562090000 0 502400000 2568000 0 1665500 6695200 0 3877200 0 7361500 6959800 5403100 3619100 5609100 15929000 953 4923 865 8178;8179;8180;8181;8182;8183;8184;8185;8186;8187;8188;8189;8190;8191 6512;6513;6514;6515;6516;6517;6518;6519;6520;6521;6522;6523 6514 11 ADIDLTK Unmodified 774.41233 0.41233399 1885 P62269 RPS18 40S ribosomal protein S18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.34 1 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 30.311 28.497 2 0.02218 30717 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 105.39 30.08 1530400000 42940000 556810000 0 49776000 45445000 60400000 48172000 40588000 54574000 93007000 76708000 137200000 130880000 89090000 104860000 954 1885 866 8192;8193;8194;8195;8196;8197;8198;8199;8200;8201;8202;8203;8204;8205;8206 6524;6525;6526;6527;6528;6529;6530;6531;6532;6533;6534 6534 11 ADIDVSGPSVDTDAPDLDIEGPEGK Unmodified 2511.15 0.15003746 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS 10 0 1 1 80.237 79.959 3 0.0018423 92526 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 25.803 17.811 2541100 0 0 0 0 2541100 0 0 0 0 0 0 0 0 0 0 955 2172 867 8207 6535 6535 1 ADIEDELDK Unmodified 1046.4768 0.47678474 2972 Q6UB99 ANKRD11 Ankyrin repeat domain-containing protein 11 yes yes 0 0 0 By MS/MS 10 0 1 1 42.78 43.534 2 0.041579 48213 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 61.691 24.133 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 956 2972 868 8208 6536 6536 1 ADIEDELDKTIELFSTEK Unmodified 2095.0209 0.020861186 2972 Q6UB99 ANKRD11 Ankyrin repeat domain-containing protein 11 yes yes 0 0 1 By MS/MS 2 0 1 1 28.757 23.238 5 0.026297 32778 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 25.558 6.1678 6957800 6957800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 957 2972 869 8209 6537 6537 0 ADIEISGPK Unmodified 928.48656 0.48656157 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 38.72 38.106 2 0.0094522 41359 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.692 48.557 393190000 0 117520000 0 23392000 0 19848000 26358000 28152000 23181000 0 23997000 23717000 36281000 35180000 35568000 958 2172 870 8210;8211;8212;8213;8214;8215;8216;8217;8218;8219;8220;8221 6538;6539;6540;6541;6542;6543;6544;6545;6546;6547;6548;6549;6550 6543 13 ADIEMPFDPSK Unmodified 1248.5696 0.56963927 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 75.512 74.476 2 4.6432E-08 92246 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145.34 124.44 740700000 25014000 610730000 0 4550900 3050700 7528700 3972900 3830500 3517700 6386900 13680000 11049000 5818300 9160900 32406000 959 487 871 8222;8223;8224;8225;8226;8227;8228;8229;8230;8231;8232;8233;8234;8235;8236 6551;6552;6553;6554;6555;6556;6557;6558;6559;6560;6561;6562 6554 11 ADIEMPFDPSK Oxidation (M) 1264.5646 0.56455389 487 O75369 FLNB Filamin-B yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 58.679 51.65 2 0.00040186 66838 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.01 95.526 119090000 7662700 111430000 0 0 0 0 0 0 0 0 0 0 0 0 0 960 487 871 8237;8238 6563;6564 6563 610 2 ADIESLVTEK Unmodified 1103.571 0.57101948 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.226 62.324 2 0.0047747 71842 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 71.614 32.807 127760000 0 0 0 6004300 5473600 7926600 10666000 8847700 6790500 13393000 15375000 15374000 12292000 7775800 17839000 961 2291 872 8239;8240;8241;8242;8243;8244;8245;8246;8247;8248;8249;8250 6565;6566;6567;6568;6569;6570;6571;6572 6572 7 ADIESLVTEKEALQK Unmodified 1672.8883 0.88833087 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 60.258 60.239 3 0.0027682 68902 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 29.355 0 39505000 0 0 0 4303300 3859200 0 0 0 4696800 9577100 6897100 0 5542000 4629400 0 962 2291 873 8251;8252;8253;8254;8255;8256;8257 6573;6574;6575;6576;6577;6578;6579 6577 7 ADIFMFDEPSSYLDVK Oxidation (M) 1891.855 0.85498183 1839 P61221 ABCE1 ATP-binding cassette sub-family E member 1 yes yes 0 1 0 By MS/MS 2 0 1 1 94.552 86.422 2 4.7164E-23 111839 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 121.04 112.09 31810000 31810000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 963 1839 874 8258 6580;6581 6581 2986 2 ADIFMFDEPSSYLDVK Unmodified 1875.8601 0.86006721 1839 P61221 ABCE1 ATP-binding cassette sub-family E member 1 yes yes 0 0 0 By MS/MS 2 0 1 1 96.93 88.8 2 0.0020488 114698 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.312 60.108 16825000 16825000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 964 1839 874 8259 6582 6582 1 ADIGPNLDQLK Unmodified 1182.6245 0.62445203 2653 Q2NKX8 ERCC6L DNA excision repair protein ERCC-6-like yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.24 2 1 10 3 1 1 1 1 1 1 1 1 1 1 56.761 55.789 2;3 0.027618 80438 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 54.259 27.875 164800000 0 116660000 0 3779900 2607400 5393200 2939600 4195000 3872300 4790400 10392000 0 5085900 5077100 0 965 2653 875 8260;8261;8262;8263;8264;8265;8266;8267;8268;8269;8270;8271;8272 6583;6584;6585;6586 6585 4 ADIGVAMGIAGSDVSK Oxidation (M) 1505.7396 0.73955814 792 P05023;P13637 ATP1A1;ATP1A3 Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-3 yes no 0 1 0 By MS/MS 2 0 1 1 59.033 53.191 2 0.00022497 68563 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.466 51.439 9831900 0 9831900 0 0 0 0 0 0 0 0 0 0 0 0 0 966 792 876 8273 6587 6587 954 1 ADIIVSELLGSFADNELSPECLDGAQHFLK Unmodified 3287.602 0.60200861 208 O14744 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 100.87 94.317 3;4 1.4287E-15 120025 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.952 64.35 49385000 39484000 9901300 0 0 0 0 0 0 0 0 0 0 0 0 0 967 208 877 8274;8275;8276 6588;6589;6590;6591 6591 4 ADIIYPGHGPVIHNAEAK Unmodified 1900.9795 0.97954591 2704 Q53H82 LACTB2 Beta-lactamase-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 6 3 2 1 61.21 54.476 2;3;4 2.4611E-36 73446 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 105.38 95.971 631260000 392150000 177820000 61295000 0 0 0 0 0 0 0 0 0 0 0 0 968 2704 878 8277;8278;8279;8280;8281;8282 6592;6593;6594;6595;6596;6597;6598;6599;6600;6601 6599 8 ADILEDK Unmodified 802.40725 0.40724861 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 26.044 26.256 2 0.018548 26429 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 111.73 52.118 1003300000 0 0 0 62146000 85919000 87055000 0 86931000 0 114060000 115600000 127650000 0 139170000 184730000 969 1681 879 8283;8284;8285;8286;8287;8288;8289;8290;8291 6602;6603;6604;6605;6606;6607 6604 5 ADILQVGLR Unmodified 983.57638 0.57637963 4314 Q9H074 PAIP1 Polyadenylate-binding protein-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.76 70.833 2 0.0031541 80422 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 92.439 65.837 198570000 0 0 0 6798300 6619600 11720000 9870100 8902600 6619100 18470000 22486000 23032000 13657000 17066000 53332000 970 4314 880 8292;8293;8294;8295;8296;8297;8298;8299;8300;8301;8302;8303 6608;6609;6610;6611;6612;6613;6614;6615;6616;6617;6618;6619 6611 11 ADIQLLVYTIDDLIDK Unmodified 1846.9928 0.99279594 4644 Q9NUJ1 ABHD10 Mycophenolic acid acyl-glucuronide esterase, mitochondrial yes yes 0 0 0 By MS/MS 2 0 2 2 104.59 96.458 2;3 0.00051873 123887 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.264 82.497 26730000 26730000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 971 4644 881 8304;8305 6620;6621 6621 2 ADIQTER Acetyl (Protein N-term) 873.41921 0.41921028 1888 P62280 RPS11 40S ribosomal protein S11 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching 9.31 2.4 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 32.607 33.196 2 0.0068035 29027 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 107.32 79.613 1180300000 6065000 0 0 74378000 83031000 80152000 83619000 73512000 71234000 101490000 118230000 131190000 121360000 109480000 126570000 972 1888 882 8306;8307;8308;8309;8310;8311;8312;8313;8314;8315;8316;8317;8318 6622;6623;6624;6625;6626;6627;6628 6627 7 ADIQTERAYQK Acetyl (Protein N-term) 1363.6732 0.67319314 1888 P62280 RPS11 40S ribosomal protein S11 yes yes 1 0 1 By MS/MS By MS/MS 2.25 0.433 3 1 1 3 38.138 34.096 2 5.5178E-23 43554 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 187.99 144.91 2220500000 72719000 2147700000 0 0 0 0 0 0 0 0 0 0 0 0 0 973 1888 883 8319;8320;8321;8322 6629;6630;6631;6632;6633;6634 6629 5 ADISGNITK Unmodified 917.48181 0.48181054 4764 Q9NZD2 GLTP Glycolipid transfer protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 23.644 23.735 2 0.017806 25327 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 55.37 25.994 22752000 0 0 0 0 4034400 4631200 5129400 0 2863500 0 0 0 0 0 6093300 974 4764 884 8323;8324;8325;8326;8327 6635;6636;6637 6637 3 ADISLDELIRK Acetyl (Protein N-term) 1313.7191 0.7190807 4243 Q9BY77 POLDIP3 Polymerase delta-interacting protein 3 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 3.8 3.12 3 1 1 1 2 1 1 89.435 85.655 2 0.00024322 106985 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.653 77.567 109120000 8607300 90238000 2219900 0 8057800 0 0 0 0 0 0 0 0 0 0 975 4243 885 8328;8329;8330;8331;8332 6638;6639;6640;6641;6642 6638 5 ADIWSLGITAIELAK Unmodified 1599.8872 0.88720866 4811 Q9P289 STK26 Serine/threonine-protein kinase 26 no no 0 0 0 By MS/MS 2 0 1 1 101.24 93.107 2 0.001515 119900 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.362 73.424 5337500 5337500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 976 4811 886 8333 6643 6643 1 ADKPDMGEIASFDK Acetyl (Protein N-term);Oxidation (M) 1580.7028 0.70283829 1953 P63313 TMSB10 Thymosin beta-10 yes yes 1 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2.96 2.2 1 28 14 4 5 34 4 1 1 1 1 62.088 57.954 2;3 5.8257E-35 70839 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 157.52 130.84 9186400000 1070900000 7910200000 54440000 0 0 0 0 0 0 0 38785000 25861000 0 18496000 67740000 977 1953 887 8334;8335;8336;8337;8338;8339;8340;8341;8342;8343;8344;8345;8346;8347;8348;8349;8350;8351;8352;8353;8354;8355;8356;8357;8358;8359;8360;8361;8362;8363;8364;8365;8366;8367;8368;8369;8370;8371;8372;8373;8374;8375;8376;8377;8378;8379;8380 6644;6645;6646;6647;6648;6649;6650;6651;6652;6653;6654;6655;6656;6657;6658;6659;6660;6661;6662;6663;6664;6665;6666;6667;6668;6669;6670;6671;6672;6673;6674;6675;6676;6677;6678;6679;6680;6681;6682;6683;6684;6685;6686;6687;6688;6689;6690;6691;6692;6693;6694;6695;6696;6697 6651 3139 52 ADKPDMGEIASFDK Acetyl (Protein N-term) 1564.7079 0.70792366 1953 P63313 TMSB10 Thymosin beta-10 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.29 3.63 1 8 1 4 2 7 1 1 1 1 1 74.794 71.905 2;3 1.5254E-52 93824 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 189.61 160.81 24691000000 2187800000 21950000000 40696000 0 0 0 0 0 0 0 78707000 49236000 0 48528000 336070000 978 1953 887 8381;8382;8383;8384;8385;8386;8387;8388;8389;8390;8391;8392;8393;8394 6698;6699;6700;6701;6702;6703;6704;6705;6706;6707;6708;6709;6710;6711;6712;6713;6714;6715;6716 6709 18 ADKPDMGEIASFDK Unmodified 1522.6974 0.69735898 1953 P63313 TMSB10 Thymosin beta-10 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 4 1 2 1 65.6 59.627 2;3 0.0022542 76529 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.104 53.505 248140000 7834300 237660000 2652800 0 0 0 0 0 0 0 0 0 0 0 0 979 1953 887 8395;8396;8397;8398 6717;6718;6719;6720 6717 4 ADLAAVEAK Unmodified 886.476 0.47599688 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30.638 29.841 2 0.0052017 32957 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 80.455 42.481 1130100000 13474000 735450000 3094800 27920000 24815000 35543000 28498000 28780000 24735000 38310000 20823000 46820000 38655000 32825000 30399000 980 2392 888 8399;8400;8401;8402;8403;8404;8405;8406;8407;8408;8409;8410;8411;8412;8413 6721;6722;6723;6724;6725;6726;6727;6728;6729;6730;6731;6732;6733 6732 9 ADLAECNIK Acetyl (Protein N-term) 1074.5016 0.5015597 1328 P33176 KIF5B Kinesin-1 heavy chain yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9 2.83 1 8 1 1 1 1 1 1 1 1 1 60.107 60.767 2 0.00166 88422 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 102.51 86.37 122830000 27571000 0 0 13424000 0 10094000 9141300 9509800 9464200 0 20424000 0 11897000 11306000 0 981 1328 889 8414;8415;8416;8417;8418;8419;8420;8421;8422 6734;6735;6736;6737;6738;6739;6740;6741 6737 8 ADLAEEYSK Unmodified 1024.4713 0.47130543 1959 P68036 UBE2L3 Ubiquitin-conjugating enzyme E2 L3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 29.634 29.798 2 0.0047955 32470 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 85.676 69.794 120730000 0 0 0 5397300 7126700 11767000 10091000 0 6373800 9175200 17633000 16184000 0 0 36982000 982 1959 890 8423;8424;8425;8426;8427;8428;8429;8430;8431 6742;6743;6744;6745;6746;6747 6742 5 ADLANEEK Acetyl (Protein N-term) 930.42944 0.42944062 4428 Q9H6Z4 RANBP3 Ran-binding protein 3 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 4.04 2 3 9 2 2 1 1 1 1 1 1 1 1 1 1 42.1 42.702 2 0.0022225 35851 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 92.47 71.771 153520000 41222000 17616000 883750 5785500 0 8276200 7368200 6303600 0 10045000 0 14005000 10554000 10005000 21452000 983 4428 891 8432;8433;8434;8435;8436;8437;8438;8439;8440;8441;8442;8443;8444;8445 6748;6749;6750;6751;6752;6753;6754;6755 6749 7 ADLATAPPHVTVVR Unmodified 1445.7991 0.79906235 3314 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 4.75 3.72 7 1 4 2 3 3 1 1 1 1 59.118 55.549 2;3 4.7117E-05 75244 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 100.55 74.04 859930000 156640000 440020000 194710000 0 0 0 0 0 0 0 0 16993000 14841000 13057000 23665000 984 3314 892 8446;8447;8448;8449;8450;8451;8452;8453;8454;8455;8456;8457 6756;6757;6758;6759;6760;6761;6762;6763;6764;6765;6766;6767 6762 7 ADLDVSGPK Unmodified 900.45526 0.45526144 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.57 3.06 5 23 2 2 1 2 2 2 2 2 2 2 2 2 2 1 2 28.851 28.158 2 0.0030483 29934 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 91.318 0 4022000000 52828000 390260000 2301900 232510000 204450000 239270000 278910000 296650000 267650000 287880000 326610000 400610000 378960000 153660000 509440000 985 2172 893 8458;8459;8460;8461;8462;8463;8464;8465;8466;8467;8468;8469;8470;8471;8472;8473;8474;8475;8476;8477;8478;8479;8480;8481;8482;8483;8484;8485 6768;6769;6770;6771;6772;6773;6774;6775;6776;6777;6778;6779;6780;6781;6782;6783;6784;6785;6786;6787;6788;6789;6790;6791;6792;6793;6794;6795;6796;6797;6798 6785 28 ADLDVSGPKVDIDVPDVNIEGPEGK Unmodified 2577.281 0.28099205 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 0 1 By MS/MS 2 0 1 1 88.209 80.079 3 6.3753E-05 104203 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.432 0 6271900 6271900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 986 2172 894 8486 6799 6799 1 ADLDVSGPKVDVDVPDVNIEGPDAK Unmodified 2563.2653 0.26534199 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 0 1 By MS/MS 3 0 1 1 83.822 80.571 3 0.030728 96566 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 35.94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 987 2172 895 8487 6800 6800 1 ADLEAQRDVTYEEAK Unmodified 1736.8217 0.82170787 1834 P61106 RAB14 Ras-related protein Rab-14 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.62 3.02 5 24 2 2 1 2 2 2 2 2 2 2 2 2 2 2 2 38.585 37.791 2;3 7.6053E-57 48062 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 175.74 159.65 1523100000 35818000 286470000 8939600 86374000 69512000 63746000 107100000 129230000 65307000 100840000 121860000 185480000 88290000 88202000 85932000 988 1834 896 8488;8489;8490;8491;8492;8493;8494;8495;8496;8497;8498;8499;8500;8501;8502;8503;8504;8505;8506;8507;8508;8509;8510;8511;8512;8513;8514;8515;8516 6801;6802;6803;6804;6805;6806;6807;6808;6809;6810;6811;6812;6813;6814;6815;6816;6817;6818;6819;6820;6821;6822;6823;6824;6825;6826;6827 6807 20 ADLEEQLSDEEK Acetyl (Protein N-term) 1446.6362 0.63619851 1524 P47755 CAPZA2 F-actin-capping protein subunit alpha-2 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.83 1 8 1 1 1 1 1 1 1 1 1 77.051 77.791 2 8.1704E-25 88503 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 172.27 149.49 148250000 24892000 0 0 14234000 14037000 0 0 0 0 18575000 24115000 0 0 21763000 30639000 989 1524 897 8517;8518;8519;8520;8521;8522;8523;8524;8525 6828;6829;6830;6831;6832;6833;6834;6835;6836;6837;6838;6839 6833 12 ADLEEVQSALYNK Unmodified 1478.7253 0.72528829 4621 Q9NS87 KIF15 Kinesin-like protein KIF15 yes yes 0 0 0 By MS/MS 2 0 1 1 75.118 70.177 2 2.2117E-08 87767 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.54 93.067 92223000 0 92223000 0 0 0 0 0 0 0 0 0 0 0 0 0 990 4621 898 8526 6840 6840 1 ADLEMQIENLK Oxidation (M) 1318.6439 0.64386684 84 CON__Q04695;Q04695 KRT17 Keratin, type I cytoskeletal 17 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 2 2 2 2 2 2 1 1 1 2 2 1 71.53 71.556 2 9.6039E-06 82622 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 135.63 113.55 + 386420000 0 0 0 76731000 28126000 25780000 30552000 30950000 16907000 18339000 11352000 16208000 96802000 25043000 9627500 991 84 899 8527;8528;8529;8530;8531;8532;8533;8534;8535;8536;8537;8538;8539;8540;8541;8542;8543;8544;8545;8546 6841;6842;6843;6844;6845;6846;6847;6848;6849;6850;6851;6852;6853;6854;6855;6856;6857;6858 6854 119 15 ADLEMQIENLK Unmodified 1302.649 0.64895222 84 CON__Q04695;Q04695 KRT17 Keratin, type I cytoskeletal 17 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 75.068 74.998 2 0.00010237 86969 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 128.86 61.688 + 242570000 0 0 0 55601000 27252000 0 0 29117000 0 0 0 43222000 87375000 0 0 992 84 899 8547;8548;8549;8550;8551 6859;6860;6861;6862;6863;6864 6863 6 ADLEMQIESLK Oxidation (M) 1291.633 0.63296781 56 CON__P02533;P02533 KRT14 Keratin, type I cytoskeletal 14 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 1 1 2 2 2 2 2 2 1 2 2 73.395 73.455 2 5.682E-28 84474 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 173.37 97.993 + 2547200000 0 0 0 570430000 112130000 174530000 72897000 329880000 86277000 366630000 174490000 129850000 278710000 148530000 102910000 993 56 900 8552;8553;8554;8555;8556;8557;8558;8559;8560;8561;8562;8563;8564;8565;8566;8567;8568;8569;8570;8571;8572 6865;6866;6867;6868;6869;6870;6871;6872;6873;6874;6875;6876;6877;6878;6879;6880;6881;6882;6883;6884;6885;6886 6865 54 22 ADLEMQIESLK Unmodified 1275.6381 0.63805318 56 CON__P02533;P02533 KRT14 Keratin, type I cytoskeletal 14 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.283 76.341 2 1.8316E-06 87260 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 163.94 95.947 + 1823200000 0 0 0 200900000 104070000 130110000 58266000 244420000 65935000 185220000 202440000 147310000 272850000 101670000 109990000 994 56 900 8573;8574;8575;8576;8577;8578;8579;8580;8581;8582;8583;8584 6887;6888;6889;6890;6891;6892;6893;6894;6895;6896;6897;6898 6894 12 ADLEMQIESLTEELAYLK Unmodified 2095.0395 0.039488138 72 CON__P13645;P13645 KRT10 Keratin, type I cytoskeletal 10 yes no 0 0 0 By MS/MS By MS/MS By MS/MS 3.38 2.55 4 3 1 4 3 1 101.72 97.154 2;3 2.4631E-65 121166 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 166.48 157.66 + 518930000 345130000 164960000 0 8834800 0 0 0 0 0 0 0 0 0 0 0 995 72 901 8585;8586;8587;8588;8589;8590;8591;8592 6899;6900;6901;6902;6903;6904;6905;6906 6903 8 ADLEMQIESLTEELAYLK Oxidation (M) 2111.0344 0.03440276 72 CON__P13645;P13645 KRT10 Keratin, type I cytoskeletal 10 yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.22 2.44 5 3 1 3 4 1 1 101.83 97.518 2;3 3.5982E-58 121143 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 154.47 137.45 + 260700000 116000000 118450000 2719300 23528000 0 0 0 0 0 0 0 0 0 0 0 996 72 901 8593;8594;8595;8596;8597;8598;8599;8600;8601 6907;6908;6909;6910;6911;6912;6913;6914 6907 89 8 ADLESLLQTPGGK Unmodified 1327.6983 0.69834526 3194 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 78.456 78.597 2 0.036978 90840 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 47.894 34.302 15462000 0 0 0 0 0 0 2355600 2158200 3630500 3734800 0 0 3583500 0 0 997 3194 902 8602;8603;8604;8605;8606 6915 6915 0 ADLESLLQTPGGKPR Unmodified 1580.8522 0.85222014 3194 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.713 73.779 3 0.0016171 84895 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 47.774 38.946 89519000 0 0 0 5323300 5146100 6298000 4439600 6860100 4133400 8774500 10013000 9199900 7028600 8296400 14006000 998 3194 903 8607;8608;8609;8610;8611;8612;8613;8614;8615;8616;8617;8618 6916;6917;6918;6919;6920;6921;6922;6923;6924;6925 6918 9 ADLGVSGPK Unmodified 842.44978 0.44978213 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 26.301 25.71 2 0.0051636 27346 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 81.642 48.859 464760000 10256000 166890000 0 18540000 15629000 13488000 22237000 27389000 0 14888000 26776000 47495000 29120000 29620000 42428000 999 2172 904 8619;8620;8621;8622;8623;8624;8625;8626;8627;8628;8629;8630;8631 6926;6927;6928;6929;6930;6931;6932;6933 6932 8 ADLHGAIISVTK Unmodified 1223.6874 0.68738664 681 O95707 POP4 Ribonuclease P protein subunit p29 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 56.182 55.301 3 0.0035647 62788 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 41.242 28.626 104490000 41526000 0 15857000 3508400 0 5244100 3264400 3752100 3944200 5506900 6021200 0 4029300 4520200 7314800 1000 681 905 8632;8633;8634;8635;8636;8637;8638;8639;8640;8641;8642;8643 6934;6935;6936;6937;6938;6939;6940;6941;6942 6938 8 ADLIAYLK Unmodified 905.52222 0.52221879 2028 P99999 CYCS Cytochrome c yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 77.08 77.283 2 0.017693 88651 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.252 29.957 78013000 0 0 0 0 0 0 0 0 0 0 19669000 0 0 12752000 45592000 1001 2028 906 8644;8645;8646 6943;6944;6945 6943 3 ADLINNLGTIAK Unmodified 1241.698 0.69795133 862;850;2716 P07900;Q14568;P08238;Q58FF8 HSP90AA1;HSP90AA2P;HSP90AB1;HSP90AB2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.84 3.75 2 17 6 13 4 17 4 1 1 1 1 1 1 1 1 1 2 1 1 78.484 76.728 2;3 3.1063E-14 90491 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 135.55 81.581 78337000000 2698700000 44562000000 1609800000 1024900000 1131700000 2683400000 1941300000 1720700000 1026800000 2818400000 3518200000 2674100000 1869100000 2522400000 6535300000 1002 850;862;2716 907 8647;8648;8649;8650;8651;8652;8653;8654;8655;8656;8657;8658;8659;8660;8661;8662;8663;8664;8665;8666;8667;8668;8669;8670;8671;8672;8673;8674;8675;8676;8677;8678;8679;8680;8681;8682;8683;8684 6946;6947;6948;6949;6950;6951;6952;6953;6954;6955;6956;6957;6958;6959;6960;6961;6962;6963;6964;6965;6966;6967;6968;6969;6970;6971;6972;6973;6974;6975;6976;6977;6978;6979;6980;6981;6982;6983;6984;6985;6986;6987;6988;6989;6990;6991;6992;6993;6994;6995;6996;6997;6998;6999;7000 6971 51 ADLIPYQDSPEGPDHSSASSGVPNPPK Unmodified 2761.2831 0.28311732 3538 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 68.697 67.549 3 2.7534E-31 76873 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.701 80.939 438070000 6428800 193710000 0 12121000 13829000 24100000 18708000 11441000 14434000 25770000 23897000 23786000 21801000 19244000 28798000 1003 3538 908 8685;8686;8687;8688;8689;8690;8691;8692;8693;8694;8695;8696;8697;8698;8699 7001;7002;7003;7004;7005;7006;7007;7008;7009;7010;7011;7012;7013;7014;7015;7016;7017;7018;7019;7020;7021;7022;7023 7008 23 ADLISEDVQRR Unmodified 1300.6735 0.67352749 3679 Q92888 ARHGEF1 Rho guanine nucleotide exchange factor 1 yes yes 0 0 1 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 38.584 38.825 3 0.00079415 43371 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 64.439 35.14 100210000 0 0 0 0 5812600 11327000 6722800 4805400 4088600 11092000 12620000 12020000 9631600 5580900 16510000 1004 3679 909 8700;8701;8702;8703;8704;8705;8706;8707;8708;8709;8710 7024;7025;7026;7027;7028;7029;7030;7031 7024 8 ADLIVTTPEK Unmodified 1085.5968 0.5968403 3320 Q8N3C0 ASCC3 Activating signal cointegrator 1 complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS 4.67 3.77 2 1 2 1 51.981 48.196 2 0.0057256 61997 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.57 84.549 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1005 3320 910 8711;8712;8713 7032;7033;7034 7032 3 ADLLGSILSSMEK Acetyl (Protein N-term) 1404.717 0.71703179 491 O75391 SPAG7 Sperm-associated antigen 7 yes yes 1 0 0 By MS/MS 2 0 1 1 105.58 100.83 2 0.0010542 124519 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.397 70.019 1695000 0 1695000 0 0 0 0 0 0 0 0 0 0 0 0 0 1006 491 911 8714 7035 7035 1 ADLLLSTQPGREEGSPLELER Unmodified 2309.1863 0.18630381 860 P08195 SLC3A2 4F2 cell-surface antigen heavy chain yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.929 78.987 3 5.2161E-54 91342 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 123.43 110.02 339230000 0 0 0 3223000 12080000 29337000 9948900 22827000 21653000 34245000 30086000 36609000 23025000 31319000 84873000 1007 860 912 8715;8716;8717;8718;8719;8720;8721;8722;8723;8724;8725;8726 7036;7037;7038;7039;7040;7041;7042;7043;7044;7045;7046;7047;7048;7049;7050;7051 7038 16 ADLLLSTQPGREEGSPLELERLK Unmodified 2550.3653 0.3653308 860 P08195 SLC3A2 4F2 cell-surface antigen heavy chain yes yes 0 0 2 By MS/MS 2 0 1 1 86.545 78.415 4 7.8884E-05 102199 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.011 38.213 17299000 17299000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1008 860 913 8727 7052 7052 1 ADLLTAEQR Unmodified 1015.5298 0.52982336 4317 Q9H089 LSG1 Large subunit GTPase 1 homolog yes yes 0 0 0 By matching By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 37.251 37.399 2 0.012756 40331 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.828 37.4 23498000 0 0 0 0 759420 1059300 0 0 0 1210700 0 0 0 5380800 15087000 1009 4317 914 8728;8729;8730;8731;8732 7053 7053 1 ADLNQGIGEPQSPSR Unmodified 1567.759 0.75904803 3770 Q96C19 EFHD2 EF-hand domain-containing protein D2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 40.461 40.626 2 6.6822E-20 44901 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 138.45 123.31 54134000 0 0 0 3239200 2960900 3563500 3918100 3644300 1871500 4345000 7730300 9206700 0 4826200 8828700 1010 3770 915 8733;8734;8735;8736;8737;8738;8739;8740;8741;8742;8743 7054;7055;7056;7057;7058;7059;7060;7061 7061 8 ADLQAAAVR Unmodified 913.49813 0.49812931 4154 Q9BTY7 HGH1 Protein HGH1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 19 2 1 1 1 2 1 2 2 1 2 2 2 27.816 28.041 2 0.010086 30490 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 107.01 75.704 356740000 0 0 0 33347000 15316000 26857000 15413000 30905000 10593000 25099000 39732000 23343000 37481000 38713000 59938000 1011 4154 916 8744;8745;8746;8747;8748;8749;8750;8751;8752;8753;8754;8755;8756;8757;8758;8759;8760;8761;8762 7062;7063;7064 7062 1 ADLRDNYSPGWK Unmodified 1420.6735 0.67352749 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 46.128 46.239 3 0.018636 51983 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 26.942 15.684 125260000 0 0 0 7296800 7215000 18841000 9910800 0 7667800 12456000 18197000 18024000 13586000 12067000 0 1012 848 917 8763;8764;8765;8766;8767;8768;8769;8770;8771;8772 7065;7066;7067;7068 7068 4 ADLSGIASGGR Unmodified 1002.5094 0.50942227 526 O75635 SERPINB7 Serpin B7 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 36.278 36.391 2 0.0024322 40116 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 67.726 38.624 102150000 0 0 0 18651000 5530200 6313800 7495100 22433000 3296100 6105800 7033300 16799000 8492600 0 0 1013 526 918 8773;8774;8775;8776;8777;8778;8779;8780;8781;8782 7069;7070;7071;7072;7073 7071 5 ADLSGMSGAR Oxidation (M) 979.43929 0.4392938 1289 P30740 SERPINB1 Leukocyte elastase inhibitor yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 9.2535 9.3529 2 0.0093412 7129 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.834 34.361 18457000 0 0 0 2358400 925330 0 1546500 0 0 1621400 0 0 2370100 2011000 7624300 1014 1289 919 8783;8784;8785;8786;8787;8788;8789 7074 7074 1898 1 ADLSGMSGAR Unmodified 963.44438 0.44437918 1289 P30740 SERPINB1 Leukocyte elastase inhibitor yes yes 0 0 0 By MS/MS 10 0 1 1 24.371 25.038 2 0.037774 25498 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.404 52.577 48103000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48103000 1015 1289 919 8790 7075 7075 0 ADLSGMSGARDIFISK Unmodified 1666.8349 0.83485551 1289 P30740 SERPINB1 Leukocyte elastase inhibitor yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 78.484 73.275 3 0.00464 92744 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 39.657 22.991 84660000 42237000 35531000 6892100 0 0 0 0 0 0 0 0 0 0 0 0 1016 1289 920 8791;8792;8793 7076;7077 7076 2 ADLSIPDLHEIVTEELEERHEK Unmodified 2601.2922 0.29222544 3187 Q86X10 RALGAPB Ral GTPase-activating protein subunit beta yes yes 0 0 1 By MS/MS 2 0 2 2 94.901 86.77 4;5 5.5605E-15 112237 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.167 64.363 39155000 39155000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1017 3187 921 8794;8795 7078;7079;7080 7080 3 ADLSLADALTEPSPDIEGEIK Acetyl (Protein N-term) 2225.0951 0.095088762 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.27 4.09 1 4 6 4 1 1 1 1 1 1 1 97.223 95.096 2;3 5.6368E-73 115341 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 193.06 163.76 206370000 143010000 27019000 0 0 1838500 0 0 0 0 10681000 7982600 5264600 0 3104700 7470000 1018 1226 922 8796;8797;8798;8799;8800;8801;8802;8803;8804;8805;8806 7081;7082;7083;7084;7085;7086;7087;7088;7089;7090;7091;7092;7093 7088 13 ADLSRMSGK Unmodified 963.48076 0.48076468 1624 P50454 SERPINH1 Serpin H1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 15.908 12.611 2 5.4969E-05 15984 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 155.42 54.676 510580000 333030000 106310000 71232000 0 0 0 0 0 0 0 0 0 0 0 0 1019 1624 923 8807;8808;8809 7094;7095;7096 7096 1 ADLTAEMISAPLGDFR Unmodified 1705.8345 0.83452116 4383 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 89.967 90.119 2 0.00028537 104496 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.289 70.61 12690000 0 0 0 0 0 0 0 1106600 0 3123300 2467600 0 0 1133100 4859300 1020 4383 924 8810;8811;8812;8813;8814 7097;7098;7099;7100 7098 4 ADLTAEMISAPLGDFR Oxidation (M) 1721.8294 0.82943578 4383 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 82.649 82.762 2 4.0436E-28 95530 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 136.38 103.88 121160000 0 0 0 0 7077600 0 8206000 8840300 8252300 16019000 20737000 17310000 7782600 11855000 15085000 1021 4383 924 8815;8816;8817;8818;8819;8820;8821;8822;8823;8824;8825 7101;7102;7103;7104;7105;7106;7107;7108;7109;7110 7103 5838 8 ADLTALFLPR Unmodified 1115.6339 0.63389451 2228 Q13045 FLII Protein flightless-1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 89.61 89.682 2 0.00091175 103405 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 114.89 105.31 128050000 0 0 0 4047600 5587600 9982500 6226300 10717000 7262500 16008000 11151000 14447000 8531300 10412000 23681000 1022 2228 925 8826;8827;8828;8829;8830;8831;8832;8833;8834;8835;8836;8837 7111;7112;7113;7114;7115;7116;7117;7118;7119;7120;7121;7122;7123;7124 7119 14 ADLTGISPSPNLYLSK Unmodified 1674.8829 0.88285156 3945 Q96P63 SERPINB12 Serpin B12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.504 79.547 2 2.2934E-24 91452 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 154.28 114.66 1272900000 0 0 0 174260000 70926000 105720000 62919000 151560000 63349000 171070000 123020000 141920000 104270000 103890000 0 1023 3945 926 8838;8839;8840;8841;8842;8843;8844;8845;8846;8847;8848 7125;7126;7127;7128;7129;7130;7131;7132;7133;7134;7135 7128 11 ADLTVLDENK Unmodified 1116.5663 0.56626845 3386 Q8NB46 ANKRD52 Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 6.25 3.77 1 1 2 2 1 1 51.491 48.953 2 0.0021721 55168 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 85.862 50.71 119570000 0 95321000 0 0 0 0 0 0 0 0 0 0 12791000 11460000 0 1024 3386 927 8849;8850;8851;8852 7136;7137;7138;7139 7138 3 ADLVISHAGAGSCLETLEK Unmodified 1969.9779 0.97789093 4537 Q9NP73 ALG13 Putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 75.567 71.82 3 8.9936E-06 90186 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.349 63.706 56823000 0 44283000 12540000 0 0 0 0 0 0 0 0 0 0 0 0 1025 4537 928 8853;8854;8855 7140;7141;7142 7140 3 ADLVIVGAEGVVENGGIINK Unmodified 1966.0735 0.073505879 2395 Q14232 EIF2B1 Translation initiation factor eIF-2B subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.57 0.495 3 4 3 2 2 89.382 85.59 2;3 1.364E-06 102931 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 99.941 89.016 81366000 52271000 17310000 11785000 0 0 0 0 0 0 0 0 0 0 0 0 1026 2395 929 8856;8857;8858;8859;8860;8861;8862 7143;7144;7145;7146;7147 7143 4 ADMETLQR Unmodified 962.44913 0.4491302 1209 P26639 TARS Threonine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26.049 25.486 2 0.0055405 26864 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 116.88 67.294 778330000 7496300 231990000 0 0 10194000 11247000 12731000 12183000 7459500 17878000 90305000 83937000 16395000 59523000 216990000 1027 1209 930 8863;8864;8865;8866;8867;8868;8869;8870;8871;8872;8873;8874;8875;8876 7148;7149;7150;7151;7152;7153;7154;7155;7156;7157;7158;7159;7160;7161 7158 14 ADMETLQRIYGISFPDPK Unmodified 2080.0299 0.029926505 1209 P26639 TARS Threonine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 92.787 86.266 3 0.0017284 109394 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 48.824 31.944 90861000 16852000 74009000 0 0 0 0 0 0 0 0 0 0 0 0 0 1028 1209 931 8877;8878 7162;7163 7162 2 ADMETLQRIYGISFPDPK Oxidation (M) 2096.0248 0.024841127 1209 P26639 TARS Threonine--tRNA ligase, cytoplasmic yes yes 0 1 1 By MS/MS 2 0 1 1 85.338 82.905 3 0.0035798 100421 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 42.277 33.676 3862900 0 0 3862900 0 0 0 0 0 0 0 0 0 0 0 0 1029 1209 931 8879 7164 7164 1767 1 ADMLCNSQSNDILQHQGSNCGGTSNK Unmodified 2835.197 0.19703798 4652 Q9NUQ3 TXLNG Gamma-taxilin yes yes 0 0 0 By MS/MS 2 0 1 1 56.757 50.935 3 9.204E-08 65694 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 56.947 53.905 20512000 0 20512000 0 0 0 0 0 0 0 0 0 0 0 0 0 1030 4652 932 8880 7165 7165 0 ADMQNLVER Acetyl (Protein N-term) 1116.5234 0.52335778 2055 Q01518 CAP1 Adenylyl cyclase-associated protein 1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 68.219 68.344 2 0.0020981 78534 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 74.92 64.054 124480000 0 0 0 3506300 0 13413000 5721000 0 4129000 11091000 15401000 14022000 6885000 12163000 38145000 1031 2055 933 8881;8882;8883;8884;8885;8886;8887;8888;8889;8890 7166;7167;7168;7169;7170;7171;7172;7173;7174;7175 7166 10 ADMQNLVERLER Acetyl (Protein N-term) 1514.7511 0.75112588 2055 Q01518 CAP1 Adenylyl cyclase-associated protein 1 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 87.613 87.766 2 2.9869E-05 101473 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.014 60.076 15686000 0 0 0 0 0 0 0 0 0 0 2664900 0 0 1391800 11630000 1032 2055 934 8891;8892;8893 7176 7176 1 ADMVETQQLMR Unmodified 1320.6166 0.61660624 4777 Q9NZN4 EHD2 EH domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 55.048 55.342 2 0.0022576 61853 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.287 61.385 21230000 0 0 0 0 0 3028000 0 4084400 0 0 5169200 0 0 3000500 5948000 1033 4777 935 8894;8895;8896;8897;8898 7177;7178;7179 7177 3 ADNEPSCSPAAQELLTR Unmodified 1857.8527 0.85269042 4288 Q9C0D5 TANC1 Protein TANC1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 2 1 1 1 1 1 1 1 61.201 61.464 2 0.00029509 70114 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 78.763 69.809 41924000 0 0 0 0 0 0 5048700 4669100 0 5878000 6960600 6970900 3993200 3957200 4445900 1034 4288 936 8899;8900;8901;8902;8903;8904;8905;8906;8907;8908 7180;7181;7182;7183;7184;7185;7186 7185 7 ADNFEYSDPVDGSISR Unmodified 1770.7697 0.7696723 1380 P36871 PGM1 Phosphoglucomutase-1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 64.754 64.382 2 6.7273E-20 73138 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 146.5 146.29 315650000 0 12831000 0 5144200 4838500 6293400 6860000 4962900 3808700 7562300 48650000 50689000 7011500 31885000 125110000 1035 1380 937 8909;8910;8911;8912;8913;8914;8915;8916;8917;8918;8919;8920;8921 7187;7188;7189;7190;7191;7192;7193;7194;7195;7196;7197;7198 7192 12 ADNIEVFAQGHGIIQVDK Unmodified 1952.9956 0.99558991 1243 P29144 TPP2 Tripeptidyl-peptidase 2 yes yes 0 0 0 By MS/MS 2 0 1 1 83.464 75.334 3 0.016902 98529 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 37.573 19.656 22287000 22287000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1036 1243 938 8922 7199 7199 0 ADNVGSALGPDWHEGLNLK Unmodified 1991.9701 0.97010344 3534 Q8WU10 PYROXD1 Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 81.791 77.106 3 0.0007425 93787 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 46.663 41.21 168640000 9061700 148860000 10723000 0 0 0 0 0 0 0 0 0 0 0 0 1037 3534 939 8923;8924;8925;8926 7200;7201 7201 2 ADPAFGLESSGIAGTTSDEPERIEESGNDEARVEGQATDEK Unmodified 4263.9164 0.91635571 3475 Q8TAQ2 SMARCC2 SWI/SNF complex subunit SMARCC2 yes yes 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 78.332 72.922 4 2.664E-148 93638 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 137.71 133.79 134050000 70633000 0 63414000 0 0 0 0 0 0 0 0 0 0 0 0 1038 3475 940 8927;8928 7202;7203 7202 2 ADPALCFLEK Unmodified 1162.5692 0.56924534 4517;3497 Q9HCK8;Q8TD26 CHD8;CHD6 Chromodomain-helicase-DNA-binding protein 8;Chromodomain-helicase-DNA-binding protein 6 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.966 77.028 2 0.0078444 88355 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.48 45.023 107970000 0 0 0 5149500 5936900 8004100 7090300 7202500 8350200 9706000 10853000 12389000 8938300 9280600 15069000 1039 4517;3497 941 8929;8930;8931;8932;8933;8934;8935;8936;8937;8938;8939;8940 7204;7205;7206;7207;7208;7209;7210 7206 7 ADPALCFLER Unmodified 1190.5754 0.57539335 4814;2670 Q9P2D1;Q3L8U1 CHD7;CHD9 Chromodomain-helicase-DNA-binding protein 7;Chromodomain-helicase-DNA-binding protein 9 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 78.744 78.794 2 0.0070418 90242 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 63.426 54.514 186020000 0 0 0 10190000 10980000 0 11383000 0 18197000 16803000 16279000 30672000 19879000 23001000 28630000 1040 4814;2670 942 8941;8942;8943;8944;8945;8946;8947;8948;8949;8950 7211;7212;7213;7214;7215;7216;7217;7218;7219;7220;7221 7217 11 ADPDCSNGQPQAAPTPGAPQNRK Unmodified 2376.0877 0.087669169 4205 Q9BW85 CCDC94 Coiled-coil domain-containing protein 94 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 25.525 25.863 3 3.4809E-05 26193 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.198 39.322 65183000 0 0 0 0 0 7000600 8099200 8606000 0 0 5933800 16072000 6571600 0 12900000 1041 4205 943 8951;8952;8953;8954;8955;8956;8957;8958;8959 7222;7223;7224;7225;7226;7227;7228;7229;7230;7231 7225 10 ADPDGPEAQAEACSGER Unmodified 1758.7115 0.71150549 4714 Q9NX24 NHP2 H/ACA ribonucleoprotein complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.442 28.637 2 5.6662E-41 30392 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 145.6 139.37 220820000 0 0 0 10549000 11821000 11340000 12751000 11709000 9181300 22886000 29510000 35978000 19703000 17432000 27960000 1042 4714 944 8960;8961;8962;8963;8964;8965;8966;8967;8968;8969;8970;8971 7232;7233;7234;7235;7236;7237;7238;7239;7240;7241;7242;7243 7237 12 ADPDVLTEVPAALK Acetyl (Protein N-term) 1479.7821 0.78207489 1241 P29083 GTF2E1 General transcription factor IIE subunit 1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.69 3.07 1 1 11 1 1 1 1 1 1 1 1 1 1 1 1 1 92.274 92.393 2 0.00011938 104921 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 80.979 71.183 138010000 23296000 8075100 0 0 6069600 7881900 8320400 8843700 6562500 15359000 12164000 10433000 8989900 8179400 13836000 1043 1241 945 8972;8973;8974;8975;8976;8977;8978;8979;8980;8981;8982;8983;8984 7244;7245;7246;7247;7248;7249;7250;7251;7252;7253;7254;7255;7256;7257;7258;7259;7260;7261 7255 18 ADPEAAWEPTEAEAR Unmodified 1641.7271 0.7270792 4857 Q9UBT2 UBA2 SUMO-activating enzyme subunit 2 yes yes 0 0 0 By MS/MS 10 0 1 1 56.822 57.434 2 0.00079778 64483 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.593 67.64 9647700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9647700 1044 4857 946 8985 7262 7262 1 ADPEELFTK Unmodified 1048.5077 0.50769094 5279 Q9Y6E0 STK24 Serine/threonine-protein kinase 24;Serine/threonine-protein kinase 24 36 kDa subunit;Serine/threonine-protein kinase 24 12 kDa subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 63.681 57.692 2 0.038536 74660 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 61.679 45.206 318660000 10403000 304630000 3625400 0 0 0 0 0 0 0 0 0 0 0 0 1045 5279 947 8986;8987;8988 7263;7264 7263 2 ADPFSFEGPEIVDCDGCTIDWK Unmodified 2557.0777 0.077740913 4057 Q99733 NAP1L4 Nucleosome assembly protein 1-like 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 94.254 89.575 3 1.167E-15 108131 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 97.488 89.867 98718000 18328000 61134000 19256000 0 0 0 0 0 0 0 0 0 0 0 0 1046 4057 948 8989;8990;8991;8992 7265;7266;7267;7268;7269 7266 5 ADPMAPGVQGSLLHVPWR Oxidation (M) 1945.9833 0.98325108 3559 Q8WVB6 CHTF18 Chromosome transmission fidelity protein 18 homolog yes yes 0 1 0 By MS/MS By matching 10 0 2 1 1 81.95 82.014 3 0.00078682 94881 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 40.856 37.422 4029700 0 0 0 0 0 2876600 0 0 0 0 0 0 0 1153100 0 1047 3559 949 8993;8994 7270 7270 5049 1 ADPNGPVEGTVIESFTDK Unmodified 1874.8898 0.88978743 1501 P46199 MTIF2 Translation initiation factor IF-2, mitochondrial yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 82.415 78.405 2 8.196E-05 97483 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.869 70.668 19186000 0 19186000 0 0 0 0 0 0 0 0 0 0 0 0 0 1048 1501 950 8995;8996 7271;7272 7271 2 ADPSHFELLK Unmodified 1155.5924 0.59242362 2531 Q15418 RPS6KA1 Ribosomal protein S6 kinase alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 2 1 1 1 1 1 1 1 1 1 1 1 58.103 57.675 2;3 0.0021543 65346 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 64.374 41.001 281280000 0 0 92413000 8261800 0 28511000 17797000 11771000 14452000 18493000 16574000 16696000 14925000 15840000 25547000 1049 2531 951 8997;8998;8999;9000;9001;9002;9003;9004;9005;9006;9007;9008;9009 7273;7274;7275;7276;7277;7278;7279;7280;7281;7282;7283;7284;7285 7274 11 ADPSILQNLR Unmodified 1125.6142 0.6142217 2712 Q567U6 CCDC93 Coiled-coil domain-containing protein 93 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 68.581 68.622 2 0.042395 78898 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 39.305 28.083 7942900 0 0 0 0 0 3501800 0 0 0 4441100 0 0 0 0 0 1050 2712 952 9010;9011 7286 7286 1 ADPSIVQALSLYDGLV Unmodified 1659.872 0.87195253 1874 P62166 NCS1 Neuronal calcium sensor 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 101.19 97.095 2 0.015637 119811 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 55.452 39.236 48819000 0 48819000 0 0 0 0 0 0 0 0 0 0 0 0 0 1051 1874 953 9012;9013 7287 7287 0 ADPSLLGFSVNASSER Unmodified 1648.8057 0.80566387 2994 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 2 1 1 1 1 1 1 1 79.962 79.914 2 3.8714E-10 92446 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 113.77 106.12 80662000 0 0 0 4588000 6651100 7738900 8096200 10327000 10882000 22023000 0 0 10356000 0 0 1052 2994 954 9014;9015;9016;9017;9018;9019;9020;9021;9022 7288;7289;7290;7291 7291 4 ADPSLNPEQLK Unmodified 1210.6194 0.61936665 5030 Q9UNF0 PACSIN2 Protein kinase C and casein kinase substrate in neurons protein 2 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 50.022 50.477 2 0.00054008 56807 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 81.915 69.388 103410000 0 0 0 0 0 0 0 0 0 0 34272000 0 0 26016000 43125000 1053 5030 955 9023;9024;9025 7292;7293;7294 7293 3 ADPSQFELLK Unmodified 1146.5921 0.59208927 1672 P51812;Q15349 RPS6KA3;RPS6KA2 Ribosomal protein S6 kinase alpha-3;Ribosomal protein S6 kinase alpha-2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.56 3.86 3 1 5 1 2 1 1 1 1 1 1 73.123 70.886 2 0.0038902 82017 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 88.819 49.566 751020000 27888000 639920000 6607100 8892300 8956500 18970000 0 11479000 0 0 0 0 0 0 28311000 1054 1672 956 9026;9027;9028;9029;9030;9031;9032;9033;9034 7295;7296;7297;7298;7299;7300;7301;7302;7303 7295 9 ADPTGVLELPK Unmodified 1138.6234 0.6233894 2600 Q16254 E2F4 Transcription factor E2F4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.127 71.201 2 0.0079706 81149 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.823 53.429 59817000 0 0 0 2688600 3752700 5078000 3404400 3865600 3340900 5487600 6669700 6756800 6619100 4159500 7993500 1055 2600 957 9035;9036;9037;9038;9039;9040;9041;9042;9043;9044;9045;9046 7304;7305;7306;7307;7308;7309;7310 7304 7 ADPTVESEEAFK Unmodified 1321.6038 0.60377617 2472 Q15014 MORF4L2 Mortality factor 4-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 44.195 44.397 2 2.6865E-05 49740 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 99.788 90.394 99957000 0 0 0 10889000 0 14446000 8981800 0 10375000 10464000 0 13763000 0 9618700 21419000 1056 2472 958 9047;9048;9049;9050;9051;9052;9053;9054;9055;9056 7311;7312;7313;7314;7315;7316;7317;7318;7319;7320 7312 9 ADPVAGIAGSAAK Acetyl (Protein N-term) 1168.6088 0.60880197 4016 Q99501 GAS2L1 GAS2-like protein 1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 65.967 66.123 2 0.0018589 75805 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 48.442 35.614 24023000 0 0 0 0 0 0 8852900 0 0 10167000 0 0 0 5002900 0 1057 4016 959 9057;9058;9059 7321;7322;7323 7321 3 ADPWQECMDYAVTLAR Acetyl (Protein N-term) 1966.8553 0.85533296 1244 P29218 IMPA1 Inositol monophosphatase 1 yes yes 1 0 0 By MS/MS 2 0 1 1 97.14 92.367 2 0.0043916 114444 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 42.785 32.554 14130000 0 14130000 0 0 0 0 0 0 0 0 0 0 0 0 0 1058 1244 960 9060 7324 7324 1 ADQDRLDLEER Unmodified 1358.6426 0.64262129 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.047 34.23 3 0.00035424 36459 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.362 69.529 89704000 0 0 0 7414800 5541600 7211300 5844800 4916500 5221700 9132500 7883100 11299000 7396300 6803300 11039000 1059 2431 961 9061;9062;9063;9064;9065;9066;9067;9068;9069;9070;9071;9072 7325;7326;7327;7328;7329;7330;7331;7332;7333;7334;7335 7328 11 ADQDRLDLEERK Unmodified 1486.7376 0.73758431 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26.902 26.167 3 4.9141E-05 28033 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 92.856 67.139 367560000 29841000 16333000 44701000 13001000 11026000 26405000 16947000 11578000 15513000 26563000 23810000 38158000 32521000 22383000 38781000 1060 2431 962 9073;9074;9075;9076;9077;9078;9079;9080;9081;9082;9083;9084;9085;9086;9087 7336;7337;7338;7339;7340;7341;7342;7343;7344;7345;7346;7347;7348;7349 7336 11 ADQDSEAMK Oxidation (M) 1009.4022 0.40223959 5187 Q9Y490 TLN1 Talin-1 yes yes 0 1 0 By MS/MS 1 0 1 1 106.48 111.74 2 0.013745 92449 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 80.676 40.324 40252000 40252000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1061 5187 963 9088 7350 7350 6556 1 ADQEEQIHPR Unmodified 1221.5738 0.57381344 4893 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 12.544 12.698 2;3 0.0054309 11755 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 51.927 43.226 142270000 0 0 0 7112700 12412000 11578000 11554000 7989800 7646200 13844000 12432000 19809000 17311000 9827200 10751000 1062 4893 964 9089;9090;9091;9092;9093;9094;9095;9096;9097;9098;9099;9100;9101;9102;9103;9104;9105;9106;9107;9108;9109;9110;9111;9112 7351;7352;7353;7354;7355;7356;7357;7358;7359 7359 8 ADQIETQQLMR Oxidation (M) 1347.6453 0.64526383 4403 Q9H4M9 EHD1 EH domain-containing protein 1 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 34.81 34.983 2 0.0024339 38938 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 63.283 34.885 34197000 0 0 0 4580900 1836700 8120000 0 0 0 0 8542200 5783600 0 0 5333700 1063 4403 965 9113;9114;9115;9116;9117;9118 7360;7361;7362;7363;7364 7364 5867 5 ADQLDYENFR Unmodified 1269.5626 0.56258006 3465 Q8NI27 THOC2 THO complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.952 56.078 2 0.0050568 64001 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 79.974 72.754 161700000 0 0 0 7390700 6907200 10422000 11992000 11294000 10412000 13138000 17254000 17156000 19091000 14069000 22577000 1064 3465 966 9119;9120;9121;9122;9123;9124;9125;9126;9127;9128;9129;9130 7365;7366;7367;7368;7369;7370 7369 5 ADQLTEEQIAEFK Acetyl (Protein N-term) 1562.7464 0.74641766 912 P0DP25;P0DP24;P0DP23 yes no 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.85 3.89 2 3 3 12 4 3 1 1 1 1 1 1 1 1 1 1 1 1 1 85.067 84.26 2 7.0376E-108 95154 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 210.91 199.34 5660300000 1442300000 434040000 20868000 133260000 166930000 123710000 154250000 208610000 118000000 183040000 585570000 740530000 161010000 277350000 910810000 1065 912 967 9131;9132;9133;9134;9135;9136;9137;9138;9139;9140;9141;9142;9143;9144;9145;9146;9147;9148;9149;9150 7371;7372;7373;7374;7375;7376;7377;7378;7379;7380;7381;7382;7383;7384;7385;7386;7387;7388;7389;7390;7391;7392;7393 7390 21 ADQLTEEQVTEFK Acetyl (Protein N-term) 1578.7413 0.74133228 1218 P27482 CALML3 Calmodulin-like protein 3 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.902 76.962 2 4.7563E-26 88738 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 162.38 152.15 96146000 0 0 0 31537000 4352200 3332600 6734200 16300000 2693500 5115800 6312800 6593800 4700200 3495500 4977800 1066 1218 968 9151;9152;9153;9154;9155;9156;9157;9158;9159;9160;9161;9162 7394;7395;7396;7397;7398;7399;7400;7401;7402;7403;7404;7405 7400 12 ADQLYLENIDEFVTDQNK Acetyl (Protein N-term) 2196.0223 0.02225817 2489 Q15054 POLD3 DNA polymerase delta subunit 3 yes yes 1 0 0 By MS/MS 1 0 1 1 105.52 110.78 3 1.6598E-14 91307 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 85.937 77.623 20396000 20396000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1067 2489 969 9163 7406 7406 1 ADQVDTQQLMR Oxidation (M) 1319.614 0.6139637 4357 Q9H223 EHD4 EH domain-containing protein 4 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 29.411 29.696 2 0.0039809 31844 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.55 44.172 39033000 0 0 0 2902200 0 0 3424800 3194500 0 3506100 4325200 6730300 4075800 3650400 7224000 1068 4357 970 9164;9165;9166;9167;9168;9169;9170;9171;9172 7407;7408 7408 5817 2 ADRDESSPYAAMLAAQDVAQR Oxidation (M) 2280.0441 0.044073019 1883 P62263 RPS14 40S ribosomal protein S14 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 18 1 2 2 2 1 1 2 2 2 1 1 1 59.552 59.662 3 2.7604E-06 67794 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 61.222 52.621 188100000 0 0 0 5951700 16582000 17576000 18184000 8709200 6539500 22648000 23513000 36193000 12102000 5307700 14791000 1069 1883 971 9173;9174;9175;9176;9177;9178;9179;9180;9181;9182;9183;9184;9185;9186;9187;9188;9189;9190 7409;7410;7411;7412;7413;7414;7415;7416;7417;7418;7419;7420;7421;7422 7418 3057 12 ADRDESSPYAAMLAAQDVAQR Unmodified 2264.0492 0.049158397 1883 P62263 RPS14 40S ribosomal protein S14 yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 76.613 76.465 3 1.2815E-61 87945 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 131.56 115.97 188400000 0 0 3910600 5218700 5905500 11838000 6901000 16388000 10888000 11303000 19621000 21682000 10088000 14050000 50612000 1070 1883 971 9191;9192;9193;9194;9195;9196;9197;9198;9199;9200;9201;9202;9203 7423;7424;7425;7426;7427;7428;7429;7430;7431 7425 8 ADREGGCAAGR Acetyl (Protein N-term) 1160.4993 0.49926829 3998 Q96T51 RUFY1 RUN and FYVE domain-containing protein 1 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 8.2449 8.3675 2 1.2971E-20 6863 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 166.19 145.67 52615000 0 0 0 2954300 2237600 3864900 3641100 3278600 0 0 11440000 8267100 5159800 4393200 7378800 1071 3998 972 9204;9205;9206;9207;9208;9209;9210;9211;9212;9213 7432;7433;7434;7435;7436;7437 7437 5 ADRESRYEEEEEQSR Unmodified 1911.8195 0.81947604 5231 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 13.599 13.76 3;4 0.0044371 12474 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.709 46.427 208870000 0 0 0 8035600 6912300 13622000 7011100 10323000 9814600 16322000 12737000 24602000 22861000 17233000 59393000 1072 5231 973 9214;9215;9216;9217;9218;9219;9220;9221;9222;9223;9224;9225;9226;9227;9228;9229;9230;9231;9232;9233;9234;9235;9236;9237 7438;7439;7440 7438 3 ADRETVAVKPTENNEEEFTSK Unmodified 2393.1347 0.13466217 437 O60841 EIF5B Eukaryotic translation initiation factor 5B yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.08 2.56 3 23 1 2 2 2 2 2 2 2 2 1 2 2 2 2 39.773 39.347 3;4 8.2003E-48 42747 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.09 83.09 781840000 19837000 0 143100000 36195000 28091000 67470000 48159000 44692000 50933000 71787000 29241000 76262000 43102000 46689000 76286000 1073 437 974 9238;9239;9240;9241;9242;9243;9244;9245;9246;9247;9248;9249;9250;9251;9252;9253;9254;9255;9256;9257;9258;9259;9260;9261;9262;9263 7441;7442;7443;7444;7445;7446;7447;7448;7449;7450;7451;7452;7453;7454;7455;7456;7457;7458;7459;7460;7461;7462;7463;7464;7465;7466;7467;7468;7469 7450 22 ADSAELK Acetyl (Protein N-term) 774.37595 0.37594848 558 O75925 PIAS1 E3 SUMO-protein ligase PIAS1 yes yes 1 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 25.399 25.583 1 0.0042102 26773 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 94.407 48.056 37822000 0 0 0 0 3710100 4636900 4071700 0 3384100 4303200 5154700 7009200 5551900 0 0 1074 558 975 9264;9265;9266;9267;9268;9269;9270;9271 7470;7471 7471 2 ADSAVSQEQLR Unmodified 1202.5891 0.58912916 4974 Q9UKS6 PACSIN3 Protein kinase C and casein kinase substrate in neurons protein 3 yes yes 0 0 0 By MS/MS 10 0 1 1 23.429 24.101 2 0.027876 24958 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.064 38.393 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1075 4974 976 9272 7472 7472 1 ADSAVSQEQLRK Unmodified 1330.6841 0.68409218 4974 Q9UKS6 PACSIN3 Protein kinase C and casein kinase substrate in neurons protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.38 3.17 4 1 19 2 3 2 1 1 2 1 2 2 2 2 2 2 17.738 17.052 2;3 2.5628E-05 22713 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.72 99.603 333770000 17196000 174670000 0 7612900 5630100 0 7986300 7446900 5582400 8531400 17821000 20599000 11914000 11199000 37579000 1076 4974 977 9273;9274;9275;9276;9277;9278;9279;9280;9281;9282;9283;9284;9285;9286;9287;9288;9289;9290;9291;9292;9293;9294;9295;9296 7473;7474;7475;7476;7477;7478;7479;7480;7481;7482;7483 7475 8 ADSDGPEFK Unmodified 964.41379 0.41379055 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 19.505 19.679 2 0.018576 20126 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 54.712 42.991 151230000 0 0 0 9656600 11389000 12987000 13494000 11441000 12533000 17347000 19617000 25836000 0 0 16930000 1077 3023 978 9297;9298;9299;9300;9301;9302;9303;9304;9305;9306 7484 7484 1 ADSEASSGPVTEDK Unmodified 1391.6052 0.60523273 3110 Q7Z6B7 SRGAP1 SLIT-ROBO Rho GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.042 14.204 2 7.8026E-13 13540 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 108.7 53.715 35220000 0 0 0 2252700 1738500 2584100 2226600 1430600 2060900 3514300 4714000 3656800 3546800 3020000 4474400 1078 3110 979 9307;9308;9309;9310;9311;9312;9313;9314;9315;9316;9317;9318 7485;7486;7487;7488;7489;7490;7491;7492;7493;7494 7486 10 ADSELQLVEQR Acetyl (Protein N-term) 1328.6572 0.65720872 847 P07741 APRT Adenine phosphoribosyltransferase yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.753 75.814 2 5.2586E-48 87458 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 188.04 129.61 544470000 0 0 0 26761000 22710000 43653000 36279000 27593000 20022000 48365000 57949000 70352000 25029000 41089000 124670000 1079 847 980 9319;9320;9321;9322;9323;9324;9325;9326;9327;9328;9329;9330 7495;7496;7497;7498;7499;7500;7501;7502;7503;7504;7505;7506 7495 12 ADSEPESPLNASYVYK Unmodified 1768.8156 0.81555986 2769 Q5T1V6 DDX59 Probable ATP-dependent RNA helicase DDX59 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.82 66.903 2 3.9856E-15 75810 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 108.56 102.59 73956000 0 0 0 4248000 4239300 6648100 5408000 5337300 4763300 7033000 5923500 8468100 6032600 6456400 9398800 1080 2769 981 9331;9332;9333;9334;9335;9336;9337;9338;9339;9340;9341;9342 7507;7508;7509;7510;7511;7512;7513;7514;7515;7516;7517 7514 11 ADSEQLARSIAEEQYSDLEK Unmodified 2281.071 0.070999276 455 O75116 ROCK2 Rho-associated protein kinase 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 79.321 74.611 3 3.6739E-128 93565 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 203.06 194.06 256010000 57617000 189810000 8579300 0 0 0 0 0 0 0 0 0 0 0 0 1081 455 982 9343;9344;9345;9346 7518;7519;7520;7521 7518 4 ADSGLLLK Acetyl (Protein N-term) 857.48583 0.48583328 2764 Q5SY16 NOL9 Polynucleotide 5'-hydroxyl-kinase NOL9 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 16 1 1 1 1 1 2 2 2 2 2 1 71.149 71.269 1;2 0.0044144 81993 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 58.981 27.692 61648000 0 0 0 3125400 2273400 0 1973500 3725400 1972000 6636700 8432300 9327800 10297000 9272400 4611900 1082 2764 983 9347;9348;9349;9350;9351;9352;9353;9354;9355;9356;9357;9358;9359;9360;9361;9362 7522;7523;7524;7525;7526;7527;7528;7529 7522 7 ADSGLREPQEDSQK Acetyl (Protein N-term) 1600.7329 0.73289286 3449 Q8NFQ8 TOR1AIP2 Torsin-1A-interacting protein 2 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 30.046 30.247 2 1.0193E-12 32436 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 107.85 78.079 48757000 0 0 0 0 4003100 3943500 4782100 5413100 2987500 5329200 0 6753900 0 8123700 7421300 1083 3449 984 9363;9364;9365;9366;9367;9368;9369;9370;9371 7530;7531;7532;7533;7534;7535;7536;7537 7536 7 ADSGPTQPPLSLSPAPETK Unmodified 1891.9527 0.95272204 242 O15027 SEC16A Protein transport protein Sec16A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.114 67.194 2 0.00026218 76836 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.466 71.327 129740000 0 0 0 6474400 8793600 10448000 9302500 8419500 6937000 9893200 13929000 12966000 13253000 11306000 18022000 1084 242 985 9372;9373;9374;9375;9376;9377;9378;9379;9380;9381;9382;9383 7538;7539;7540;7541;7542;7543;7544;7545;7546;7547 7545 10 ADSGTAGGAALAAPAPGPGSGGPGPR Acetyl (Protein N-term) 2158.0403 0.04030827 3774 Q96C90 PPP1R14B Protein phosphatase 1 regulatory subunit 14B yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 64.33 64.418 3 3.1687E-19 73687 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 72.399 56.977 72296000 0 0 0 0 4989100 0 7110300 0 4406200 7308400 21162000 0 8821600 18498000 0 1085 3774 986 9384;9385;9386;9387;9388;9389;9390 7548;7549;7550;7551 7550 4 ADSILAYHQQNVPR Unmodified 1610.8165 0.81650333 3155 Q86UU0 BCL9L B-cell CLL/lymphoma 9-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 2 2 49.629 49.844 2;3 1.6328E-16 56996 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 97.86 86.168 321420000 0 0 0 17066000 22037000 0 21128000 22086000 0 28992000 43030000 44779000 29387000 24239000 68675000 1086 3155 987 9391;9392;9393;9394;9395;9396;9397;9398;9399;9400;9401;9402;9403 7552;7553;7554;7555;7556;7557;7558;7559;7560;7561;7562;7563;7564;7565;7566;7567;7568;7569;7570 7570 16 ADSLLAVVK Unmodified 914.54368 0.54368251 2532;2377 Q15424;Q14151 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.44 3.62 4 2 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 69.103 67.458 1;2 0.0033037 76880 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 93.374 70.354 1046400000 19993000 648130000 20184000 18181000 18978000 23300000 22859000 20776000 22212000 32923000 36450000 48032000 35459000 31967000 46945000 1087 2532;2377 988 9404;9405;9406;9407;9408;9409;9410;9411;9412;9413;9414;9415;9416;9417;9418;9419;9420;9421 7571;7572;7573;7574;7575;7576;7577;7578;7579;7580;7581;7582;7583;7584;7585 7571 14 ADSLLEDITDIPK Unmodified 1428.7348 0.73479034 4100 Q9BQL6 FERMT1 Fermitin family homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.87 3 5 1 1 1 1 1 1 1 1 90.283 88.434 2 0.0021307 110163 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.91 85.598 190170000 29996000 146590000 2911300 0 0 1581200 0 1008200 0 2652800 1766100 0 0 0 3659300 1088 4100 989 9422;9423;9424;9425;9426;9427;9428;9429 7586;7587;7588;7589;7590;7591 7588 5 ADSLVEGTSSR Unmodified 1120.536 0.53603095 3313 Q8N1G2 CMTR1 Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 22.157 21.825 2 0.0028846 22549 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 65.627 45.486 66775000 0 6766000 0 0 5828100 9726600 0 0 5662400 10400000 11392000 0 0 5742600 11256000 1089 3313 990 9430;9431;9432;9433;9434;9435;9436;9437 7592;7593;7594;7595;7596;7597;7598;7599 7598 8 ADSRDPASDQMQHWK Acetyl (Protein N-term) 1812.7849 0.78494521 768 P04040 CAT Catalase yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 43.523 43.711 3 0.00014718 48521 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 66.738 61.42 134440000 0 0 0 19351000 0 10047000 6619000 0 10674000 16574000 21407000 15453000 25074000 9242700 0 1090 768 991 9438;9439;9440;9441;9442;9443;9444;9445;9446 7600;7601 7601 1 ADSRDPASDQMQHWK Acetyl (Protein N-term);Oxidation (M) 1828.7799 0.77985983 768 P04040 CAT Catalase yes yes 1 1 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 29.687 29.673 3 0.0015757 32363 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 40.211 35.968 29279000 0 0 0 6946800 2508800 2687200 0 0 5338100 5804100 0 0 5994100 0 0 1091 768 991 9447;9448;9449;9450;9451;9452 7602 7602 921 1 ADSSSVLPSPLSISTK Unmodified 1587.8356 0.83556702 2843 Q66K14 TBC1D9B TBC1 domain family member 9B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 78.91 78.601 2 0.0039602 91241 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 57.802 46.088 251030000 0 128180000 0 8934200 7026400 8402300 11495000 10194000 7939200 11985000 7439400 13745000 10573000 12420000 12689000 1092 2843 992 9453;9454;9455;9456;9457;9458;9459;9460;9461;9462;9463;9464;9465 7603;7604;7605;7606;7607;7608;7609;7610;7611;7612;7613;7614;7615 7614 12 ADSTDIRSEEPLK Unmodified 1459.7155 0.71545188 3061 Q7LBC6 KDM3B Lysine-specific demethylase 3B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.19 2.31 1 2 24 3 2 2 2 2 2 2 2 2 2 2 2 2 35.23 34.865 2;3 1.0333E-05 38544 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 108.9 59.403 1356000000 0 85476000 0 83891000 53273000 106540000 104620000 90172000 100040000 94114000 117490000 152120000 123800000 100800000 143650000 1093 3061 993 9466;9467;9468;9469;9470;9471;9472;9473;9474;9475;9476;9477;9478;9479;9480;9481;9482;9483;9484;9485;9486;9487;9488;9489;9490;9491;9492 7616;7617;7618;7619;7620;7621;7622;7623;7624;7625;7626;7627;7628;7629;7630;7631;7632;7633;7634;7635;7636;7637 7633 19 ADSVPGTYRK Unmodified 1092.5564 0.55637247 2468 Q15004 KIAA0101 PCNA-associated factor yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 17.625 14.157 2 0.01632 17968 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 88.948 62.564 39531000 13815000 17799000 7917200 0 0 0 0 0 0 0 0 0 0 0 0 1094 2468 994 9493;9494;9495 7638 7638 0 ADSVSSSNIK Unmodified 1006.4931 0.49310351 2699 Q53F19 C17orf85 Uncharacterized protein C17orf85 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.102 13.257 2 0.033145 12171 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 42.19 30.679 34408000 0 0 0 2156100 2195500 2611900 2627400 1361200 1919600 4653500 3282500 4396700 2988800 2576200 3638900 1095 2699 995 9496;9497;9498;9499;9500;9501;9502;9503;9504;9505;9506;9507 7639 7639 1 ADTALASIPPVAEGK Unmodified 1438.7668 0.76675917 2063 Q01804 OTUD4 OTU domain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 2 1 1 1 1 1 1 1 1 1 2 69.454 69.516 2 0.00050888 80131 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 80.979 68.766 57172000 0 0 0 2772900 3735900 3821600 3552600 3214400 3864600 4986900 4823800 7010000 5104900 3815000 10470000 1096 2063 996 9508;9509;9510;9511;9512;9513;9514;9515;9516;9517;9518;9519;9520;9521 7640;7641;7642;7643;7644;7645;7646;7647;7648;7649;7650;7651 7648 12 ADTEEEFLAFRK Unmodified 1454.7042 0.70415892 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 69.136 67.149 3 0.0051485 76351 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 35.774 31.073 55702000 10273000 0 6124100 6060100 3603600 0 6981300 0 0 0 0 0 0 0 22659000 1097 1492 997 9522;9523;9524;9525;9526;9527 7652;7653;7654;7655;7656;7657;7658;7659 7652 8 ADTGLETSTR Unmodified 1049.4989 0.49891717 1614 P49959 MRE11A Double-strand break repair protein MRE11A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 15.705 15.821 2 0.00023752 14584 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 124.95 75.53 42963000 0 0 0 11311000 0 9338900 0 0 0 0 22313000 0 0 0 0 1098 1614 998 9528;9529;9530;9531;9532;9533;9534 7660;7661;7662;7663;7664;7665;7666 7662 5 ADTGLFSR Unmodified 865.42938 0.42938104 2370 Q14134 TRIM29 Tripartite motif-containing protein 29 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 39.011 39.191 2 0.0089203 43411 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 84.568 46.922 42179000 0 0 0 0 0 8813600 10922000 15199000 0 0 7243800 0 0 0 0 1099 2370 999 9535;9536;9537;9538 7667;7668 7667 2 ADTIATIEK Unmodified 960.51278 0.51277632 2233 Q13107 USP4 Ubiquitin carboxyl-terminal hydrolase 4 yes yes 0 0 0 By MS/MS 2 0 1 1 38.858 33.89 2 0.013304 44162 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.168 47.287 33019000 0 33019000 0 0 0 0 0 0 0 0 0 0 0 0 0 1100 2233 1000 9539 7669 7669 1 ADTIDTIEK Unmodified 1004.5026 0.50260556 5198 Q9Y4E8 USP15 Ubiquitin carboxyl-terminal hydrolase 15 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 36.086 30.448 2 0.037811 40121 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.104 19.995 33318000 8228300 25090000 0 0 0 0 0 0 0 0 0 0 0 0 0 1101 5198 1001 9540;9541 7670;7671 7670 2 ADTLDPALLRPGR Unmodified 1393.7678 0.76776222 1482 P43686 PSMC4 26S protease regulatory subunit 6B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.27 64.361 3 0.0017196 73327 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 58.098 50.318 166880000 0 0 0 9882900 9911400 21345000 4082900 4084700 5159700 28098000 28154000 30817000 4519500 6744700 14078000 1102 1482 1002 9542;9543;9544;9545;9546;9547;9548;9549;9550;9551;9552;9553 7672;7673;7674;7675;7676;7677;7678 7677 7 ADTLIGEK Unmodified 845.44945 0.44944778 5370 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 3.8 3.12 3 1 1 1 2 1 1 29.346 25.959 2 0.013743 32637 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 97.071 19.148 + 2401700000 88642000 2250000000 14955000 0 0 0 0 0 0 0 0 0 0 0 48110000 1103 5370 1003 9554;9555;9556;9557;9558 7679;7680;7681 7681 1 ADTLTDEINFLR Unmodified 1406.7042 0.70415892 66;58;779 P04259;CON__P02538;P02538;CON__P04259 KRT6B;KRT6A Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 6A no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 85.142 85.209 2 1.947E-290 98929 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 258 234.68 + 1520900000 0 0 0 162600000 63465000 56679000 90084000 219940000 60627000 129800000 81778000 129210000 369800000 82985000 73895000 1104 779;58;66 1004 9559;9560;9561;9562;9563;9564;9565;9566;9567;9568;9569;9570 7682;7683;7684;7685;7686;7687;7688;7689;7690;7691;7692;7693;7694;7695;7696;7697;7698;7699;7700;7701 7699 20 ADTLTLEER Unmodified 1046.5244 0.52440364 4898 Q9UHD8 SEPT9 Septin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.955 40.135 2 0.0032704 44269 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 90.601 42.944 169850000 0 0 0 13138000 12375000 10996000 13700000 10065000 13469000 16126000 22345000 15103000 14697000 9385000 18449000 1105 4898 1005 9571;9572;9573;9574;9575;9576;9577;9578;9579;9580;9581;9582 7702;7703;7704;7705;7706;7707;7708;7709;7710;7711 7707 10 ADTLTLK Unmodified 760.43307 0.43306943 2474 Q15019 SEPT2 Septin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 9.47 2 1 14 1 1 2 1 1 1 1 1 2 1 1 1 1 30.749 30.588 2 0.023435 33225 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 85.265 35.615 720160000 0 413930000 0 13949000 15453000 21876000 20314000 15063000 13055000 29368000 45134000 36143000 34584000 21466000 39830000 1106 2474 1006 9583;9584;9585;9586;9587;9588;9589;9590;9591;9592;9593;9594;9595;9596;9597 7712;7713;7714;7715 7712 4 ADTLTPEECQQFK Unmodified 1565.7032 0.70317264 2596 Q16181 SEPT7 Septin-7 yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 47.725 47.501 2 2.0622E-05 53178 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 90.263 63.374 40801000 0 0 0 5483700 4940200 0 0 0 0 0 30377000 0 0 0 0 1107 2596 1007 9598;9599;9600 7716 7716 1 ADTLTPEECQQFKK Unmodified 1693.7981 0.79813565 2596 Q16181 SEPT7 Septin-7 yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By MS/MS By matching 7.86 3.4 1 1 5 2 1 1 1 1 1 38.836 38.1 3 0.0055511 49006 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.345 42.601 30533000 0 4457700 0 2222700 1898000 0 2912300 0 0 0 11718000 7323900 0 0 0 1108 2596 1008 9601;9602;9603;9604;9605;9606;9607 7717;7718;7719 7717 3 ADTNGIIK Unmodified 830.44978 0.44978213 4655 Q9NUU7 DDX19A ATP-dependent RNA helicase DDX19A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.43 3.02 1 2 11 1 2 1 1 1 1 1 1 1 1 1 1 1 22.469 21.714 2 0.018796 27157 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.029 22.766 447490000 441220 256110000 0 10192000 10123000 19551000 20746000 11347000 10799000 0 22017000 23280000 20658000 15263000 26966000 1109 4655 1009 9608;9609;9610;9611;9612;9613;9614;9615;9616;9617;9618;9619;9620;9621 7720;7721;7722;7723;7724 7722 5 ADTPGPEDGGVK Unmodified 1141.5251 0.52513192 202 O14686 KMT2D Histone-lysine N-methyltransferase 2D yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 19.165 19.364 2 0.0056508 18518 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.597 40.608 55937000 0 0 0 3743300 3325300 4394400 3939800 0 4055500 4724600 5771400 7155600 5614300 5514000 7698600 1110 202 1010 9622;9623;9624;9625;9626;9627;9628;9629;9630;9631;9632 7725;7726;7727;7728 7727 4 ADTPSLGEGPEK Unmodified 1199.567 0.56699673 2587 Q15833 STXBP2 Syntaxin-binding protein 2 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 32.742 32.875 2 0.0098798 34998 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.894 39.969 68755000 0 0 0 6247000 3262900 8614300 4536100 0 3405500 10395000 9538700 0 4266600 6559800 11929000 1111 2587 1011 9633;9634;9635;9636;9637;9638;9639;9640;9641;9642 7729 7729 1 ADTQTYQPYNK Unmodified 1327.6044 0.60444487 2013 P84090 ERH Enhancer of rudimentary homolog yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 22.981 23.487 2 6.2308E-05 24679 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 149.57 130.59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1112 2013 1012 9643;9644 7730;7731 7731 2 ADTSQEICSPR Unmodified 1262.5561 0.55611447 1707 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.808 22.015 2 1.9825E-05 23027 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 129.38 92.038 117280000 0 0 0 4054000 5530300 10871000 9817500 7754300 7378100 10961000 14218000 13084000 10483000 10995000 12137000 1113 1707 1013 9645;9646;9647;9648;9649;9650;9651;9652;9653;9654;9655;9656 7732;7733;7734;7735 7732 4 ADTSQEICSPRLPISASHSSK Unmodified 2270.0961 0.09610859 1707 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 61.503 54.716 3;4 0.00039298 73872 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.826 52.116 70644000 64969000 0 5674800 0 0 0 0 0 0 0 0 0 0 0 0 1114 1707 1014 9657;9658;9659 7736;7737;7738 7736 3 ADTSSQGALVFLSK Unmodified 1422.7355 0.73545904 3091 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 75.713 75.766 2 9.2178E-12 87385 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 122.51 103.27 141820000 0 0 0 6206300 7742900 13689000 10974000 9835600 0 15716000 19758000 15122000 14349000 10091000 18332000 1115 3091 1015 9660;9661;9662;9663;9664;9665;9666;9667;9668;9669;9670 7739;7740;7741;7742;7743;7744 7741 3 ADTTSTVTPVPGQEK Unmodified 1529.7573 0.7573167 4469 Q9H9B1 EHMT1 Histone-lysine N-methyltransferase EHMT1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.36 33.544 2 5.7008E-06 36452 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 107.97 97.209 189480000 0 0 0 12485000 11171000 14777000 12972000 11425000 12960000 17407000 21864000 24105000 14333000 15076000 20907000 1116 4469 1016 9671;9672;9673;9674;9675;9676;9677;9678;9679;9680;9681;9682 7745;7746;7747;7748;7749;7750;7751;7752;7753;7754;7755;7756 7750 12 ADTTTGSAAGPPLSEDDK Unmodified 1731.7799 0.77990263 4469 Q9H9B1 EHMT1 Histone-lysine N-methyltransferase EHMT1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.507 34.69 2 6.1932E-11 37632 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 113.76 99.793 144540000 0 0 0 7836200 7529700 11939000 8120500 8376700 8877700 12432000 16455000 16916000 13228000 10419000 22409000 1117 4469 1017 9683;9684;9685;9686;9687;9688;9689;9690;9691;9692;9693;9694 7757;7758;7759;7760;7761;7762;7763;7764;7765;7766;7767;7768 7766 12 ADTTTPTPTAILAPGSPASPPGSLEPK Unmodified 2573.3225 0.32246294 1189 P25440 BRD2 Bromodomain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 81.498 81.661 3 2.5239E-07 94296 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.374 32.211 29202000 0 0 0 0 0 0 3987500 0 3476400 5814300 0 5330100 0 0 10593000 1118 1189 1018 9695;9696;9697;9698;9699 7769;7770;7771;7772 7771 4 ADTTTPTTIDPIHEPPSLPPEPK Unmodified 2453.2326 0.2325853 441 O60885 BRD4 Bromodomain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 2 1 1 1 76.237 75.657 3 6.2376E-32 89924 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 113.36 104.5 167210000 0 54710000 0 7312800 6787600 7697200 9976700 0 5195800 10498000 16287000 13125000 5634200 10323000 19667000 1119 441 1019 9700;9701;9702;9703;9704;9705;9706;9707;9708;9709;9710;9711;9712;9713 7773;7774;7775;7776;7777;7778;7779;7780;7781;7782;7783;7784;7785;7786;7787 7780 13 ADTTTPTTSAITASR Unmodified 1492.7369 0.73691561 2493 Q15059 BRD3 Bromodomain-containing protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 37.634 37.816 2 0.00010417 41506 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 93.345 50.196 48256000 0 0 0 4838200 2595600 3610500 4992300 0 2344700 4033900 6058300 6590600 4892600 2983700 5315300 1120 2493 1020 9714;9715;9716;9717;9718;9719;9720;9721;9722;9723;9724 7788;7789;7790;7791;7792;7793;7794;7795;7796 7794 9 ADVDISGPK Unmodified 900.45526 0.45526144 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 14 2 1 1 1 1 1 1 1 1 1 2 1 27.97 28.145 1;2 0.0032668 29412 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 93.143 13.669 395740000 0 0 0 111150000 3428300 4328700 5409300 6161600 3684700 5242000 7998200 9156300 9676100 217550000 11962000 1121 2172 1021 9725;9726;9727;9728;9729;9730;9731;9732;9733;9734;9735;9736;9737;9738 7797;7798;7799;7800 7798 3 ADVDMVDK Unmodified 891.40078 0.40078303 4825 Q9P2R3 ANKFY1 Rabankyrin-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 23.461 23.86 2 0.04296 24039 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.423 26.931 20508000 0 0 0 0 0 2706500 0 2066400 0 0 4060700 3298800 0 0 8376100 1122 4825 1022 9739;9740;9741;9742;9743 7801 7801 1 ADVDVQPYAFTTK Unmodified 1453.7089 0.70890994 4263 Q9BZE4 GTPBP4 Nucleolar GTP-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 66.556 66.71 2 0.0003627 76714 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 81.017 66.782 137610000 0 0 0 0 7388100 7947400 8697100 11146000 5572400 13420000 15351000 19153000 14962000 16101000 17876000 1123 4263 1023 9744;9745;9746;9747;9748;9749;9750;9751;9752;9753;9754 7802;7803;7804;7805;7806;7807;7808;7809;7810;7811;7812;7813 7810 12 ADVDVSGPK Unmodified 886.43961 0.43961137 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.632 19.832 2 0.0030483 20467 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 91.318 75.937 1016100000 0 0 0 64203000 53441000 61003000 80590000 83746000 72629000 85037000 79771000 107040000 123510000 81715000 123430000 1124 2172 1024 9755;9756;9757;9758;9759;9760;9761;9762;9763;9764;9765;9766 7814;7815;7816;7817;7818;7819;7820;7821;7822;7823;7824;7825 7816 10 ADVEEEFLALRK Unmodified 1418.7405 0.74054442 1492 P46013 MKI67 Antigen KI-67 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.74 2.92 3 16 1 1 1 1 2 2 2 2 1 2 2 1 1 76.785 76.087 2;3 0.00064595 87601 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 56.551 45.552 224620000 13457000 22070000 10563000 0 1947700 0 9532600 14892000 16935000 24280000 16426000 28996000 13640000 14958000 36919000 1125 1492 1025 9767;9768;9769;9770;9771;9772;9773;9774;9775;9776;9777;9778;9779;9780;9781;9782;9783;9784;9785 7826;7827;7828;7829;7830;7831;7832;7833;7834;7835;7836;7837;7838;7839 7827 14 ADVEEESLALRK Unmodified 1358.7042 0.70415892 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 2 1 1 1 42.856 43.045 3 0.00090026 47825 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 62.14 47.883 117440000 0 0 0 0 9402200 10221000 11912000 10810000 10423000 10946000 18454000 0 11828000 9336200 14104000 1126 1492 1026 9786;9787;9788;9789;9790;9791;9792;9793;9794;9795;9796;9797 7840;7841;7842;7843;7844;7845;7846;7847;7848;7849;7850;7851 7845 12 ADVEGELLACR Unmodified 1231.5867 0.58668632 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 60.367 60.665 2 0.001117 69162 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 92.051 76.791 28339000 0 0 0 0 0 0 2425200 0 2965600 2868900 3586900 5570400 4464600 0 6457700 1127 1492 1027 9798;9799;9800;9801;9802;9803;9804 7852;7853;7854;7855 7855 4 ADVIPVHYYLIPPPTK Unmodified 1822.0029 0.0029071185 1243 P29144 TPP2 Tripeptidyl-peptidase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 88.495 83.35 3 0.00035298 105791 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.826 56.359 57174000 35830000 15601000 5742700 0 0 0 0 0 0 0 0 0 0 0 0 1128 1243 1028 9805;9806;9807 7856;7857;7858;7859 7857 4 ADVLDLHEAGGEDFAMDEDGDESIHK Acetyl (Protein N-term);Oxidation (M) 2872.1981 0.19812664 5248 Q9Y5S9 RBM8A RNA-binding protein 8A yes yes 1 1 0 By MS/MS By MS/MS 2 0 2 1 1 82 78.384 3 3.6307E-06 97165 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 61.522 60.623 144360000 0 135280000 9076400 0 0 0 0 0 0 0 0 0 0 0 0 1129 5248 1029 9808;9809 7860;7861 7860 6650 2 ADVLDLHEAGGEDFAMDEDGDESIHK Acetyl (Protein N-term) 2856.2032 0.20321202 5248 Q9Y5S9 RBM8A RNA-binding protein 8A yes yes 1 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 2 2 1 85.997 81.238 3 7.9296E-57 102245 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 124.81 119.45 248030000 48337000 192860000 6837900 0 0 0 0 0 0 0 0 0 0 0 0 1130 5248 1029 9810;9811;9812;9813;9814 7862;7863;7864;7865;7866 7864 5 ADVLSEEAILK Unmodified 1186.6445 0.64451877 5280 Q9Y6E2 BZW2 Basic leucine zipper and W2 domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 76.282 71.439 2 0.00012298 87951 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 112.3 69.431 2571100000 51426000 2492000000 27651000 0 0 0 0 0 0 0 0 0 0 0 0 1131 5280 1030 9815;9816;9817;9818 7867;7868;7869;7870;7871 7871 5 ADVLSSFLDEK Unmodified 1222.6081 0.60813326 4332 Q9H0K6 PUS7L Pseudouridylate synthase 7 homolog-like protein yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 87.206 83.569 2 0.013831 103895 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.096 71.648 48329000 0 47505000 823840 0 0 0 0 0 0 0 0 0 0 0 0 1132 4332 1031 9819;9820 7872 7872 0 ADVLSVLR Acetyl (Protein N-term) 913.52328 0.52328142 2916 Q6P1J9 CDC73 Parafibromin yes yes 1 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 91.296 91.369 2 0.016 105069 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 47.082 21.188 551670000 0 0 0 17460000 34862000 29925000 32728000 26373000 24721000 53007000 56029000 70101000 56288000 61969000 88203000 1133 2916 1032 9821;9822;9823;9824;9825;9826;9827;9828;9829;9830;9831;9832 7873 7873 1 ADVLTTGAGNPVGDK Unmodified 1413.71 0.70997257 768 P04040 CAT Catalase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 46.242 45.959 2 1.2811E-39 57084 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.78 119.81 479540000 0 35811000 0 67370000 22008000 28532000 20563000 83756000 17960000 34754000 28277000 49055000 39556000 25322000 26571000 1134 768 1033 9833;9834;9835;9836;9837;9838;9839;9840;9841;9842;9843;9844;9845 7874;7875;7876;7877;7878;7879;7880;7881;7882;7883;7884;7885;7886;7887 7877 12 ADVQSIIGLQR Unmodified 1198.667 0.66698555 2262 Q13263 TRIM28 Transcription intermediary factor 1-beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.54 71.612 2 7.2256E-11 82660 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 153.05 80.815 1852000000 0 0 0 67455000 97638000 164820000 110980000 103390000 81808000 190170000 240770000 209970000 134190000 153400000 297370000 1135 2262 1034 9846;9847;9848;9849;9850;9851;9852;9853;9854;9855;9856;9857 7888;7889;7890;7891;7892;7893;7894;7895;7896;7897;7898;7899;7900 7900 11 ADVSSTGQGVIDK Unmodified 1275.6307 0.63065962 5292 Q9Y6Q9 NCOA3 Nuclear receptor coactivator 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.153 30.345 2 0.00059549 32968 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 91.937 71.796 147610000 0 0 0 8882700 11281000 9503500 9856800 9985700 7761000 16612000 11874000 15691000 12996000 14183000 18986000 1136 5292 1035 9858;9859;9860;9861;9862;9863;9864;9865;9866;9867;9868;9869 7901;7902;7903;7904;7905;7906;7907;7908;7909;7910;7911 7906 10 ADVTARSLQYEYK Acetyl (Protein N-term) 1584.7784 0.77838649 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 1 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 68.201 62.548 2 3.1524E-10 79936 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.02 80.872 603600000 9352200 590020000 4226500 0 0 0 0 0 0 0 0 0 0 0 0 1137 528 1036 9870;9871;9872;9873 7912;7913;7914 7912 3 ADVTPPPDGSTTHNLEVSPK Unmodified 2061.0015 0.0014631481 485 O75362 ZNF217 Zinc finger protein 217 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 9 2.45 1 6 1 1 1 1 1 1 1 48.105 47.318 3 0.001895 53545 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 37.237 21.098 23613000 0 3419500 0 2045900 3646100 0 0 0 0 0 0 0 5008600 5077400 4415200 1138 485 1037 9874;9875;9876;9877;9878;9879;9880 7915;7916;7917;7918;7919 7918 5 ADVTRLPATIAR Unmodified 1282.7357 0.73573382 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 1 2 2 2 2 1 2 2 2 1 52.067 52.179 2;3 1.8504E-23 58764 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 136.27 114.64 487910000 0 0 0 25831000 25314000 40533000 36909000 37148000 42047000 43285000 56329000 44533000 45864000 39406000 50715000 1139 2451 1038 9881;9882;9883;9884;9885;9886;9887;9888;9889;9890;9891;9892;9893;9894;9895;9896;9897;9898;9899;9900;9901 7920;7921;7922;7923;7924;7925;7926;7927;7928;7929;7930;7931;7932;7933 7925 11 ADVTRLPATLSR Unmodified 1298.7306 0.73064844 2201 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 51.578 51.601 3 0.011753 58258 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 41.996 10.565 35769000 0 0 0 0 4882300 6595100 7555200 0 0 0 0 0 10878000 5859200 0 1140 2201 1039 9902;9903;9904;9905;9906 7934 7934 1 ADVVDSETVVR Unmodified 1188.5986 0.59863121 4424 Q9H6T0 ESRP2 Epithelial splicing regulatory protein 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 40.772 41.148 2 0.010693 46032 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 63.426 40.686 121260000 0 0 0 0 0 0 0 0 21139000 0 0 0 28486000 25700000 45932000 1141 4424 1040 9907;9908;9909;9910 7935;7936;7937 7936 2 ADVVESWIGEK Unmodified 1231.6085 0.60846762 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.93 2.63 1 1 12 2 1 1 1 1 1 1 2 1 1 1 1 72.938 72.339 2 0.00029015 83228 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 93.556 77.894 642170000 0 522370000 0 5619400 4478900 11210000 6689500 0 4723600 14997000 15875000 18523000 7530800 0 30147000 1142 2344 1041 9911;9912;9913;9914;9915;9916;9917;9918;9919;9920;9921;9922;9923;9924 7938;7939;7940;7941;7942;7943;7944;7945;7946;7947;7948;7949 7944 11 ADVVPQQADPEFPR Unmodified 1567.7631 0.76307078 2778 Q5T5Y3 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 62.779 62.848 2 0.0087284 71309 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.352 39.819 20258000 0 0 0 0 2277200 4018400 3691300 4509600 0 0 0 0 0 0 5761500 1143 2778 1042 9925;9926;9927;9928;9929;9930 7950;7951;7952 7950 3 ADVVVGK Acetyl (Protein N-term) 728.40685 0.40685468 4600 Q9NRG0 CHRAC1 Chromatin accessibility complex protein 1 yes yes 1 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.889 42.066 1 0.0088557 47336 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 62.714 18.103 423580000 0 0 0 25281000 22417000 40232000 28961000 29630000 22228000 46270000 53074000 40462000 36309000 29946000 48769000 1144 4600 1043 9931;9932;9933;9934;9935;9936;9937;9938;9939;9940;9941;9942 7953 7953 1 ADVVVSGPK Unmodified 870.48108 0.48108226 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 25.208 24.595 2 0.0048548 31053 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.26 89.069 996470000 0 212420000 1497400 59600000 41043000 41364000 54926000 70899000 50643000 53808000 47484000 98277000 86410000 72824000 105280000 1145 2172 1044 9943;9944;9945;9946;9947;9948;9949;9950;9951;9952;9953;9954;9955;9956;9957 7954;7955;7956;7957;7958;7959;7960;7961;7962;7963;7964;7965;7966;7967;7968;7969 7957 16 ADYDTLSLR Unmodified 1052.5138 0.51383895 5182 Q9Y446 PKP3 Plakophilin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 53.701 53.791 2 0.0098768 62120 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 65.465 44.945 151810000 0 0 0 12743000 9288100 8729200 8144600 17284000 7838700 16915000 19538000 0 13331000 14567000 23431000 1146 5182 1045 9958;9959;9960;9961;9962;9963;9964;9965;9966;9967;9968 7970;7971;7972;7973;7974;7975 7973 5 ADYEIASK Unmodified 895.42871 0.42871234 5141;4557 Q9Y383;Q9NQ29 LUC7L2;LUC7L Putative RNA-binding protein Luc7-like 2;Putative RNA-binding protein Luc7-like 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 22.981 23.175 2 0.036446 23755 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 88.358 56.231 347840000 0 0 0 20717000 27656000 25542000 22514000 18477000 16308000 33000000 35867000 52909000 48341000 0 46513000 1147 5141;4557 1046 9969;9970;9971;9972;9973;9974;9975;9976;9977;9978;9979 7976 7976 0 ADYNLTR Unmodified 851.41373 0.41373097 1210 P26640 VARS Valine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 24.55 24.758 2 0.04393 26584 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 67.032 15.576 155160000 0 0 0 7953500 6878000 17628000 8487900 5928400 0 14221000 14576000 18525000 11047000 15028000 34884000 1148 1210 1047 9980;9981;9982;9983;9984;9985;9986;9987;9988;9989;9990 7977 7977 1 ADYSGMSSGSGLYAQK Oxidation (M) 1636.7039 0.70390092 4930 Q9UIV8 SERPINB13 Serpin B13 yes yes 0 1 0 By MS/MS 10 0 1 1 34.041 33.633 2 0.002755 37402 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 43.68 36.299 3822300 0 0 0 3822300 0 0 0 0 0 0 0 0 0 0 0 1149 4930 1048 9991 7978 7978 6279 1 ADYSGMSSGSGLYAQK Unmodified 1620.709 0.7089863 4930 Q9UIV8 SERPINB13 Serpin B13 yes yes 0 0 0 By MS/MS 10 0 1 1 47.889 47.3 2 0.0010146 53942 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 77.593 59.784 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1150 4930 1048 9992 7979 7979 1 ADYSTVPPPSSGSAGGGGGGGGGGGVNDAFK Acetyl (Protein N-term) 2678.1845 0.1844659 3737 Q96AE4 FUBP1 Far upstream element-binding protein 1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.74 2 7 1 1 1 1 1 1 1 2 77.271 78.095 2;3 4.2135E-78 92192 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 84.641 77.195 156750000 19999000 11636000 0 5584700 0 0 0 0 0 15004000 21262000 20849000 0 19805000 42614000 1151 3737 1049 9993;9994;9995;9996;9997;9998;9999;10000;10001 7980;7981;7982;7983;7984;7985;7986;7987;7988 7985 9 ADYTSHLR Unmodified 961.46174 0.4617438 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.223 20.424 2 0.0052025 19899 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 143.85 121.72 189550000 0 0 0 10106000 7311100 16893000 10647000 8372500 8329800 20581000 23026000 29506000 22105000 15147000 17521000 1152 3641 1050 10002;10003;10004;10005;10006;10007;10008;10009;10010;10011;10012;10013 7989;7990;7991;7992;7993;7994;7995 7992 7 AEAAAAPTVAPGPAQPGHVSPTPATTSPGEK Unmodified 2864.4305 0.43045026 5293 Q9Y6R0 NUMBL Numb-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.12 2.32 1 7 1 1 1 1 1 1 1 1 53.774 53.078 3 2.2125E-34 60734 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 77.522 71.227 58591000 0 1619200 0 5926500 6302100 0 10041000 8729600 0 0 0 13080000 12892000 0 0 1153 5293 1051 10014;10015;10016;10017;10018;10019;10020;10021 7996;7997;7998;7999;8000;8001;8002;8003;8004 8001 9 AEAAALSTQCR Unmodified 1176.5557 0.55572054 4424 Q9H6T0 ESRP2 Epithelial splicing regulatory protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 21.848 22.042 2 5.1668E-05 23062 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 125.71 109.51 192100000 0 0 0 9731100 13081000 15449000 16938000 23804000 13957000 17435000 19073000 25534000 0 16649000 20454000 1154 4424 1052 10022;10023;10024;10025;10026;10027;10028;10029;10030;10031;10032 8005;8006;8007;8008;8009;8010;8011;8012;8013 8007 6 AEAAASALADADADLEER Unmodified 1787.8174 0.81735077 348 O43633 CHMP2A Charged multivesicular body protein 2a yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 2 2 1 1 2 2 2 1 2 2 2 71.784 71.855 2;3 1.5394E-71 82060 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 172.1 156.56 133080000 0 0 0 2215900 8724500 16887000 5247400 0 9742300 11810000 13642000 10627000 8551600 12091000 33541000 1155 348 1053 10033;10034;10035;10036;10037;10038;10039;10040;10041;10042;10043;10044;10045;10046;10047;10048;10049;10050;10051;10052 8014;8015;8016;8017;8018;8019;8020;8021;8022;8023;8024 8015 10 AEAAASALADADADLEERLK Unmodified 2028.9964 0.99637777 348 O43633 CHMP2A Charged multivesicular body protein 2a yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 4 3.03 2 2 1 2 1 1 1 83.686 80.228 3 1.9043E-50 101771 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 142.3 127.72 180570000 111240000 26477000 30776000 0 0 0 0 0 0 0 0 0 0 0 12078000 1156 348 1054 10053;10054;10055;10056;10057 8025;8026;8027;8028;8029 8027 3 AEAALLLLPEAAAER Acetyl (Protein N-term) 1578.8617 0.86172219 3890 Q96JB2 COG3 Conserved oligomeric Golgi complex subunit 3 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 2 1 99.316 99.447 2 3.6662E-10 115673 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 92.866 83.433 6063200 0 0 0 0 0 0 0 0 0 2319100 0 1492300 0 0 2251800 1157 3890 1055 10058;10059;10060;10061;10062 8030;8031;8032;8033 8030 4 AEAAPESQPPASEDLEVDPPVAAK Unmodified 2417.1598 0.15981428 3999 Q96T58 SPEN Msx2-interacting protein yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 68.917 68.658 3 2.1293E-08 79233 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 42.325 34.037 8321500 0 0 0 3099000 0 0 0 0 0 0 0 0 5222500 0 0 1158 3999 1056 10063;10064 8034 8034 1 AEAAPPLRPEHFAK Unmodified 1532.81 0.80996139 2778 Q5T5Y3 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 50.274 42.374 3 0.022144 58520 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 36.445 22.872 28114000 28114000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1159 2778 1057 10065 8035 8035 1 AEADEIFQELEK Unmodified 1420.6722 0.67219008 2896 Q6NS38 ALKBH2 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By matching By MS/MS 7.91 3.42 2 1 8 1 2 1 1 1 1 1 1 1 1 82.766 81.393 2 3.2239E-05 100975 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.67 108.26 120980000 5284000 94957000 0 0 0 2793800 0 2137800 1702400 2612500 0 2436000 907010 2644700 5509300 1160 2896 1058 10066;10067;10068;10069;10070;10071;10072;10073;10074;10075;10076 8036;8037;8038;8039 8037 4 AEADEPVTSQVR Unmodified 1300.6259 0.62590859 5349 yes yes 0 0 0 By MS/MS 10 0 1 1 67.634 67.128 2 0.00033233 77371 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 99.815 8.2657 + 4322200 0 0 0 0 4322200 0 0 0 0 0 0 0 0 0 0 1161 5349 1059 10077 8040 8040 1 AEADRIVFENPDPSDGFVLIPDLK Unmodified 2656.3384 0.33844735 3773 Q96C86 DCPS m7GpppX diphosphatase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.5 0.5 2 2 2 1 1 96.576 92.225 3 3.4983E-19 115388 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.346 92.19 77706000 72591000 4011900 1103000 0 0 0 0 0 0 0 0 0 0 0 0 1162 3773 1060 10078;10079;10080;10081 8041;8042;8043 8042 3 AEAEAASEVWCRR Unmodified 1533.6994 0.69942466 620 O95081 AGFG2 Arf-GAP domain and FG repeat-containing protein 2 yes yes 0 0 1 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 42.395 42.848 3 0.043661 46856 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 18.413 10.434 23283000 0 0 0 0 0 0 0 0 0 0 5186300 0 7477100 3872200 6747000 1163 620 1061 10082;10083;10084;10085 8044 8044 1 AEAEAGAGSPTSTPAPPEALSSEMSELSAR Unmodified 2900.3346 0.33456054 4801 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 82.805 82.885 3 2.5388E-11 96029 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 42.894 35.941 19148000 0 0 0 0 2202800 2588700 1441800 2268700 2315300 3767200 0 4563100 0 0 0 1164 4801 1062 10086;10087;10088;10089;10090;10091;10092 8045;8046;8047;8048;8049;8050 8046 6 AEAEAGSPRPDPR Unmodified 1351.648 0.64804102 1802 P58107 EPPK1 Epiplakin yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 14 2 1 1 1 1 1 2 2 1 2 12.799 12.961 3 0.0052089 11914 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 34.386 15.928 520020000 0 0 0 47604000 47521000 63981000 49614000 45932000 0 53138000 43328000 80347000 57128000 31430000 0 1165 1802 1063 10093;10094;10095;10096;10097;10098;10099;10100;10101;10102;10103;10104;10105;10106 8051;8052;8053;8054 8054 3 AEAEALYQTK Unmodified 1122.5557 0.55570376 77;100;960;50;109;91 CON__ENSEMBL:ENSBTAP00000038253;CON__Q9R0H5;CON__Q3SY84;Q3SY84;P12035;CON__P12035;CON__Q7RTT2;CON__Q8N1N4-2;Q8N1N4;CON__P19013;P19013 KRT71;KRT3;KRT78;KRT4 Keratin, type II cytoskeletal 71;Keratin, type II cytoskeletal 3;Keratin, type II cytoskeletal 78;Keratin, type II cytoskeletal 4 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.383 30.572 2 1.3372E-101 33018 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 215.14 167.29 + 1062500000 0 0 0 124110000 32511000 32299000 118230000 408920000 24449000 39150000 44050000 93928000 89142000 35254000 20449000 1166 50;109;91;960;100;77 1064 10107;10108;10109;10110;10111;10112;10113;10114;10115;10116;10117;10118 8055;8056;8057;8058;8059;8060;8061;8062;8063;8064;8065;8066;8067;8068;8069 8062 15 AEAEAWYQTK Unmodified 1195.551 0.55095274 69;88;96;107 CON__Q5XKE5;Q5XKE5;CON__P08729;CON__Q3KNV1;P08729;CON__Q9DCV7 KRT79;KRT7 Keratin, type II cytoskeletal 79;Keratin, type II cytoskeletal 7 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 40.644 40.769 2 0.0016398 45249 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 104.2 93.335 + 172030000 0 0 0 11484000 11668000 14410000 16721000 10759000 15876000 15928000 20222000 0 16578000 14549000 23831000 1167 96;69;88;107 1065 10119;10120;10121;10122;10123;10124;10125;10126;10127;10128;10129 8070;8071;8072;8073;8074;8075;8076;8077;8078;8079;8080;8081 8072 11 AEAEGVPTTPGPASGSTFR Acetyl (Protein N-term) 1872.8854 0.88537076 3173 Q86VR2 FAM134C Protein FAM134C yes yes 1 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 69.157 69.243 2 0.00063085 79522 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 43.991 29.734 15821000 0 0 0 0 1574500 1898100 0 1630900 1831700 0 3944500 4941100 0 0 0 1168 3173 1066 10130;10131;10132;10133;10134;10135 8082;8083 8083 2 AEAELGTFPR Unmodified 1089.5455 0.54547343 4649 Q9NUP1 BLOC1S4 Biogenesis of lysosome-related organelles complex 1 subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 52.519 52.859 2 0.0021904 60242 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 85.731 64.283 65292000 0 0 0 0 0 0 5279800 4277900 4981500 0 0 21748000 12041000 0 16964000 1169 4649 1067 10136;10137;10138;10139;10140;10141;10142 8084;8085;8086;8087 8085 4 AEAELGTFPRAFK Unmodified 1435.746 0.74596415 4649 Q9NUP1 BLOC1S4 Biogenesis of lysosome-related organelles complex 1 subunit 4 yes yes 0 0 1 By MS/MS 2 0 1 1 76.42 68.29 3 0.003202 89988 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.121 57.644 24248000 24248000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1170 4649 1068 10143 8088 8088 1 AEAENTSEVSTVLK Unmodified 1476.7308 0.7307676 2603 Q16512 PKN1 Serine/threonine-protein kinase N1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 49.175 49.343 2 3.4906E-19 56308 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 134.75 116.44 59343000 0 0 0 0 12285000 0 0 9065500 0 11043000 0 0 11499000 0 15450000 1171 2603 1069 10144;10145;10146;10147;10148;10149;10150;10151;10152;10153 8089;8090;8091;8092;8093;8094;8095;8096;8097 8097 9 AEAESLYQSK Unmodified 1124.535 0.53496832 780 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.39 2.07 3 2 57 2 2 1 6 6 4 4 6 5 6 4 6 4 4 2 25.469 25.257 1;2 6.7646E-27 27363 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 194.06 113.62 + 129410000000 129200000 1073900000 8063000 24398000000 7404900000 10373000000 7355300000 23416000000 6024300000 10020000000 8722900000 10245000000 11161000000 5320100000 3759700000 1172 780 1070 10154;10155;10156;10157;10158;10159;10160;10161;10162;10163;10164;10165;10166;10167;10168;10169;10170;10171;10172;10173;10174;10175;10176;10177;10178;10179;10180;10181;10182;10183;10184;10185;10186;10187;10188;10189;10190;10191;10192;10193;10194;10195;10196;10197;10198;10199;10200;10201;10202;10203;10204;10205;10206;10207;10208;10209;10210;10211;10212;10213;10214;10215 8098;8099;8100;8101;8102;8103;8104;8105;8106;8107;8108;8109;8110;8111;8112;8113;8114;8115;8116;8117;8118;8119;8120;8121;8122;8123;8124;8125;8126;8127;8128;8129;8130;8131;8132;8133;8134;8135;8136;8137;8138;8139;8140;8141;8142;8143;8144;8145;8146;8147;8148;8149;8150;8151;8152;8153;8154;8155;8156;8157;8158;8159;8160;8161;8162;8163;8164;8165;8166;8167 8106 64 AEAESLYQSKYEELQITAGR Unmodified 2285.1176 0.11755554 780 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 3 1 1 1 1 1 1 1 72.467 72.545 2;3 1.3641E-87 83254 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 170.38 162.29 + 555960000 0 0 0 26363000 19700000 17171000 17224000 239770000 13092000 44665000 28715000 99749000 14724000 15094000 19692000 1173 780 1071 10216;10217;10218;10219;10220;10221;10222;10223;10224;10225;10226;10227;10228;10229 8168;8169;8170;8171;8172;8173;8174;8175;8176;8177;8178;8179;8180;8181;8182;8183;8184;8185;8186 8176 19 AEAESMYQIK Oxidation (M) 1184.5383 0.53833914 67;51 CON__H-INV:HIT000292931;CON__P05787;P05787;CON__Q9H552 KRT8 Keratin, type II cytoskeletal 8 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 2 2 2 1 27.637 27.813 2 0.00068745 29834 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 110.41 44.057 + 564120000 0 0 0 31625000 43841000 54146000 52286000 38499000 45741000 54914000 56894000 73445000 49769000 36860000 26103000 1174 51;67 1072 10230;10231;10232;10233;10234;10235;10236;10237;10238;10239;10240;10241;10242;10243;10244;10245;10246;10247;10248;10249;10250;10251;10252 8187;8188;8189;8190;8191;8192;8193;8194;8195;8196;8197;8198;8199;8200;8201;8202;8203;8204;8205;8206;8207 8191 43;75 13 AEAESMYQIK Unmodified 1168.5434 0.54342452 67;51 CON__H-INV:HIT000292931;CON__P05787;P05787;CON__Q9H552 KRT8 Keratin, type II cytoskeletal 8 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.226 41.404 2 3.7225E-08 46764 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 155.1 59.194 + 1169700000 0 0 0 51928000 82095000 75740000 81999000 72347000 60579000 112290000 118310000 144950000 120230000 77845000 171360000 1175 51;67 1072 10253;10254;10255;10256;10257;10258;10259;10260;10261;10262;10263;10264 8208;8209;8210;8211;8212;8213;8214;8215;8216;8217;8218;8219;8220;8221 8221 14 AEAESRAEAARIEGEGSVLQAK Unmodified 2271.1455 0.14550162 2444 Q14764 MVP Major vault protein yes yes 0 0 2 By MS/MS 2 0 1 1 53.935 50.038 3 0.019295 62545 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 42.172 30.516 23287000 0 0 23287000 0 0 0 0 0 0 0 0 0 0 0 0 1176 2444 1073 10265 8222 8222 1 AEAESWYQTK Unmodified 1211.5459 0.54586736 66;58;779;80;53;105 P04259;CON__P50446;CON__Q8BGZ7;CON__O95678;O95678;CON__P02538;P02538;CON__P04259 KRT6B;KRT75;KRT6A Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 6A no no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 37.745 37.851 2 0.00026432 41787 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 140.35 93.928 + 319260000 0 0 0 48485000 0 9240400 19028000 30506000 6451000 14862000 12020000 0 178670000 0 0 1177 779;80;105;53;58;66 1074 10266;10267;10268;10269;10270;10271;10272;10273;10274;10275 8223;8224;8225;8226;8227;8228;8229;8230;8231 8229 9 AEAETLPSLSITK Unmodified 1358.7293 0.72931103 642 O95340 PAPSS2 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.649 71.715 2 0.010547 81834 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.839 40.578 145260000 0 0 0 8289000 7265600 14484000 11899000 7376100 6875500 11910000 16107000 14354000 10177000 9686800 26835000 1178 642 1075 10276;10277;10278;10279;10280;10281;10282;10283;10284;10285;10286;10287 8232;8233;8234;8235 8234 3 AEAFVNTWSSMGQETVEK Oxidation (M) 2028.9099 0.90987095 5281 Q9Y6G5 COMMD10 COMM domain-containing protein 10 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 71.317 66.157 2 4.3481E-55 84096 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 151.74 135.6 22142000 0 22142000 0 0 0 0 0 0 0 0 0 0 0 0 0 1179 5281 1076 10288;10289 8236 8236 6691 1 AEAFVNTWSSMGQETVEK Unmodified 2012.915 0.91495633 5281 Q9Y6G5 COMMD10 COMM domain-containing protein 10 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 81.467 77.449 2 3.7699E-76 96354 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 222.1 199.87 71217000 0 71217000 0 0 0 0 0 0 0 0 0 0 0 0 0 1180 5281 1076 10290;10291 8237;8238 8237 2 AEAGAGLSETVTETTVTVTTEPENR Acetyl (Protein N-term) 2604.2402 0.24024945 447 O60927 PPP1R11 Protein phosphatase 1 regulatory subunit 11 yes yes 1 0 0 By MS/MS 1 0 1 1 102.79 108.05 3 1.8967E-46 87987 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 115.55 110.9 10436000 10436000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1181 447 1077 10292 8239 8239 1 AEAGAGLSETVTETTVTVTTEPENRSLTIK Acetyl (Protein N-term) 3146.583 0.58304731 447 O60927 PPP1R11 Protein phosphatase 1 regulatory subunit 11 yes yes 1 0 1 By MS/MS By MS/MS 2.4 0.49 3 2 3 2 89.341 83.757 3 1.3343E-175 106982 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 170.27 161.98 151580000 91581000 60002000 0 0 0 0 0 0 0 0 0 0 0 0 0 1182 447 1078 10293;10294;10295;10296;10297 8240;8241;8242;8243;8244 8244 5 AEAGAGSATEFQFR Unmodified 1440.6634 0.66335673 1513 P46783;Q9NQ39 RPS10;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 56.669 56.864 2 1.562E-49 64582 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 193.96 187.93 375470000 0 0 0 0 18092000 30595000 17881000 21090000 24536000 32598000 43547000 46914000 39448000 33178000 67589000 1183 1513 1079 10298;10299;10300;10301;10302;10303;10304;10305;10306;10307;10308 8245;8246;8247;8248;8249;8250;8251;8252;8253;8254;8255;8256;8257;8258;8259 8248 15 AEAGDNLGALVR Unmodified 1184.6149 0.61494998 1572 P49411 TUFM Elongation factor Tu, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 57.692 57.93 2 0.0036147 66098 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 59.908 43.07 60976000 0 0 0 0 0 14394000 7084800 0 0 0 0 0 0 13018000 26479000 1184 1572 1080 10309;10310;10311;10312 8260;8261;8262;8263 8261 1 AEAGEAGQATAEAECHR Unmodified 1756.7435 0.74347432 678 O95671 ASMTL N-acetylserotonin O-methyltransferase-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.218 22.424 3 4.6503E-10 23399 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 88.133 86.549 132850000 0 0 0 6688200 4585200 13424000 9478600 6278000 3970900 14050000 11459000 12793000 10221000 17752000 22155000 1185 678 1081 10313;10314;10315;10316;10317;10318;10319;10320;10321;10322;10323;10324 8264;8265;8266;8267;8268;8269;8270;8271;8272;8273;8274 8264 11 AEAGEQPGTAER Unmodified 1214.5527 0.55274365 1778 P56182 RRP1 Ribosomal RNA processing protein 1 homolog A yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 8.8538 8.9683 2 0.0050474 7275 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 55.567 26.84 9468300 0 0 0 869070 913460 658280 1027800 0 691850 0 1277800 1867700 1281800 0 880520 1186 1778 1082 10325;10326;10327;10328;10329;10330;10331;10332;10333 8275;8276;8277 8277 3 AEAGGGWEGSASYK Unmodified 1368.5946 0.59460847 3726 Q969T9 WBP2 WW domain-binding protein 2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 39.84 35.001 2 4.7701E-18 45496 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 143.79 137.48 89767000 0 89767000 0 0 0 0 0 0 0 0 0 0 0 0 0 1187 3726 1083 10334;10335 8278;8279 8278 2 AEAGPEGVAPAPEGEK Unmodified 1507.7155 0.71545188 5206 Q9Y4L1 HYOU1 Hypoxia up-regulated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.47 3.93 3 2 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 47.273 47.149 2 4.4725E-40 101903 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 161.48 125.94 489520000 121150000 109280000 0 10918000 11527000 20759000 16740000 19636000 7283200 23490000 33360000 29476000 16826000 22736000 46339000 1188 5206 1084 10336;10337;10338;10339;10340;10341;10342;10343;10344;10345;10346;10347;10348;10349;10350;10351;10352 8280;8281;8282;8283;8284;8285;8286;8287;8288;8289;8290;8291;8292;8293;8294;8295;8296 8291 17 AEAGPVEQQLLQETEK Unmodified 1768.8843 0.88430813 4077 Q99996 AKAP9 A-kinase anchor protein 9 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.55 2 2 8 1 3 1 1 1 1 1 1 1 1 71.444 70.553 2;3 1.9817E-10 87904 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.97 91.713 123570000 100760 95476000 0 0 0 2226300 0 0 2385200 3773400 3483600 4687700 2882800 3359400 5193000 1189 4077 1085 10353;10354;10355;10356;10357;10358;10359;10360;10361;10362;10363;10364 8297;8298;8299;8300;8301;8302;8303;8304;8305;8306 8299 9 AEAGSPTGGLFNTPPPTPPEQDK Unmodified 2307.1019 0.10190547 4296 Q9GZN2 TGIF2 Homeobox protein TGIF2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 72.833 72.865 3 0.0034811 83998 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 22.409 19.354 17709000 0 0 0 0 2168200 4911400 0 5757000 0 0 0 0 0 0 4871900 1190 4296 1086 10365;10366;10367;10368 8307;8308 8307 2 AEAGVPAEFSIWTR Unmodified 1532.7623 0.7623425 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 85.088 85.195 2 1.0084E-13 98868 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 113.38 95.111 238050000 0 0 0 0 5428100 16281000 5165000 13042000 8871100 16812000 26127000 27077000 11092000 22163000 85992000 1191 1124 1087 10369;10370;10371;10372;10373;10374;10375;10376;10377;10378;10379 8309;8310;8311;8312;8313;8314;8315;8316;8317;8318;8319;8320;8321;8322;8323 8316 14 AEAHHAEL Unmodified 876.40898 0.40897995 4012 Q99470 SDF2 Stromal cell-derived factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 9.9878 6.8633 2 0.011129 9262 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 110.34 93.41 110950000 5771100 80606000 24568000 0 0 0 0 0 0 0 0 0 0 0 0 1192 4012 1088 10380;10381;10382 8324 8324 1 AEAISLQMVK Oxidation (M) 1104.5849 0.5848954 3485 Q8TC07 TBC1D15 TBC1 domain family member 15 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 9.22 2.2 1 8 1 1 1 1 1 1 1 1 1 48.952 48.532 2 0.0057464 55132 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 59.35 38.05 47624000 0 3400000 0 3184200 0 6897400 4548000 3690300 0 5577700 0 0 7597700 5659000 7070200 1193 3485 1089 10383;10384;10385;10386;10387;10388;10389;10390;10391 8325;8326;8327;8328 8325 5005 4 AEAISLQMVK Unmodified 1088.59 0.58998078 3485 Q8TC07 TBC1D15 TBC1 domain family member 15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.24 2 1 10 2 1 1 1 1 1 1 1 1 1 1 1 66.712 65.675 2 0.0026435 75233 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 81.548 55.811 413190000 0 315410000 1007900 6149600 7640100 7571600 8094200 7348800 5526400 10845000 0 13687000 9536100 0 20367000 1194 3485 1089 10392;10393;10394;10395;10396;10397;10398;10399;10400;10401;10402;10403;10404 8329;8330;8331;8332;8333;8334;8335;8336;8337;8338;8339;8340;8341;8342;8343;8344 8338 16 AEALASAIASTK Unmodified 1131.6136 0.61355299 4682 Q9NVT9 ARMC1 Armadillo repeat-containing protein 1 yes yes 0 0 0 By MS/MS 3 0 1 1 54.599 49.72 2 0.0084725 61428 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 66.056 38.926 3957100 0 3957100 0 0 0 0 0 0 0 0 0 0 0 0 0 1195 4682 1090 10405 8345 8345 1 AEALEAAIENLNEAK Unmodified 1584.7995 0.79951586 4945 Q9UJX4 ANAPC5 Anaphase-promoting complex subunit 5 yes yes 0 0 0 By MS/MS 2 0 1 1 85.062 80.318 2 3.1091E-06 99829 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.59 103.87 26307000 0 26307000 0 0 0 0 0 0 0 0 0 0 0 0 0 1196 4945 1091 10406 8346 8346 1 AEALEDLVGFK Unmodified 1190.6183 0.61830402 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 82.404 81.754 2 0.00042561 94592 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 85.731 73.375 107450000 0 58922000 1083200 1339800 1613300 3100600 3147300 3698200 3715400 5168500 4977900 4675800 2932300 3334300 9743200 1197 1492 1092 10407;10408;10409;10410;10411;10412;10413;10414;10415;10416;10417;10418;10419;10420;10421;10422 8347;8348;8349;8350;8351;8352;8353;8354;8355;8356;8357;8358;8359;8360;8361;8362;8363 8348 16 AEALITSQQPTPETLPVINK Unmodified 2149.163 0.16304917 2694 Q52LR7 EPC2 Enhancer of polycomb homolog 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By matching 10 0 6 1 1 1 1 1 1 79.734 79.784 3 0.0066977 92083 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 30.416 27.177 18069000 0 0 0 0 2859000 3043600 2625300 2953300 0 3957400 0 0 0 2630300 0 1198 2694 1093 10423;10424;10425;10426;10427;10428 8364;8365 8364 2 AEAPLLTQTR Unmodified 1098.6033 0.60332266 4210 Q9BWG6 SCNM1 Sodium channel modifier 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 43.587 43.776 2 0.0054527 49936 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 68.893 46.153 139420000 0 0 0 11015000 10560000 0 10513000 9027400 8351100 0 19683000 21658000 16610000 13491000 18509000 1199 4210 1094 10429;10430;10431;10432;10433;10434;10435;10436;10437;10438 8366;8367;8368;8369;8370;8371;8372;8373 8372 7 AEAPLPSPK Unmodified 908.49673 0.49673232 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 32 32.271 2 0.0039296 34623 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 99.442 59.339 174970000 0 0 0 0 17424000 21399000 0 0 0 25135000 29276000 42145000 0 0 39592000 1200 2172 1095 10439;10440;10441;10442;10443;10444;10445 8374;8375;8376;8377;8378;8379;8380 8379 7 AEAQENGDHREVK Unmodified 1481.6859 0.68588309 2051 Q01167 FOXK2 Forkhead box protein K2 yes yes 0 0 1 By MS/MS 2 0 1 1 5.6918 3.4868 3 0.0037791 5114 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 51.726 40.088 11825000 0 0 11825000 0 0 0 0 0 0 0 0 0 0 0 0 1201 2051 1096 10446 8381 8381 1 AEAQIAAK Unmodified 800.43922 0.43921744 730 P00505 GOT2 Aspartate aminotransferase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2.67 0.471 1 2 1 2 11.671 8.1448 2 0.023989 11090 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.784 31.664 56289000 630540 55659000 0 0 0 0 0 0 0 0 0 0 0 0 0 1202 730 1097 10447;10448;10449 8382 8382 1 AEAQPVHQAYQMSSFEQPFR Oxidation (M) 2366.075 0.074979217 5074 Q9UQR1 ZNF148 Zinc finger protein 148 yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 62.295 61.947 3 1.2274E-05 70829 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 56.081 51.728 11651000 0 0 0 2560700 0 9089900 0 0 0 0 0 0 0 0 0 1203 5074 1098 10450;10451 8383 8383 6452 1 AEAQQVEALPGPSLDQWHR Unmodified 2131.0447 0.044665367 2848 Q66PJ3 ARL6IP4 ADP-ribosylation factor-like protein 6-interacting protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 74.734 74.75 3 0.0010656 85859 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.164 37.32 57463000 0 0 0 2585700 3712600 7047500 3230500 0 0 5386900 5866200 0 6739000 8444900 14450000 1204 2848 1099 10452;10453;10454;10455;10456;10457;10458;10459;10460 8384;8385;8386;8387;8388 8387 5 AEASFWTAEEVDLSK Unmodified 1681.7835 0.78353145 1301 P31350 RRM2 Ribonucleoside-diphosphate reductase subunit M2 yes yes 0 0 0 By MS/MS 2 0 1 1 85.766 77.636 2 0.00053999 101305 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.793 75.82 12605000 12605000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1205 1301 1100 10461 8389 8389 1 AEASIQAGAGDGEWEESEVK Unmodified 2061.9127 0.91270772 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 58.549 58.83 2 1.5573E-28 66229 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 134.21 126.1 30073000 0 0 0 0 0 0 2206700 2142200 2269000 2901500 5414200 3747000 3184100 3083000 5125100 1206 2172 1101 10462;10463;10464;10465;10466;10467;10468;10469;10470 8390;8391;8392;8393 8390 4 AEASPHPGR Acetyl (Protein N-term) 962.45699 0.45699277 4178 Q9BV68 RNF126 E3 ubiquitin-protein ligase RNF126 yes yes 1 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.68 12.836 2 0.00028047 11770 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 141.39 114.51 234670000 0 0 0 14312000 13585000 15764000 17942000 18187000 12416000 22427000 20947000 26260000 25462000 19298000 28069000 1207 4178 1102 10471;10472;10473;10474;10475;10476;10477;10478;10479;10480;10481;10482 8394;8395;8396;8397;8398;8399;8400;8401;8402;8403 8401 9 AEASPNDTAGAR Unmodified 1158.5265 0.5265289 3968 Q96RK0 CIC Protein capicua homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 7.9242 8.0343 2 0.0011685 4992 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 70.1 48.8 31453000 0 0 0 1787700 1663600 2748700 2593300 2831900 2175300 2517700 0 4711600 3473300 3455400 3494600 1208 3968 1103 10483;10484;10485;10486;10487;10488;10489;10490;10491;10492;10493 8404;8405;8406;8407;8408;8409;8410;8411;8412;8413;8414 8410 11 AEASPSSAAVSSLIEK Unmodified 1545.7886 0.78861683 2024 P98174 FGD1 FYVE, RhoGEF and PH domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 67.159 67.243 2 7.9623E-08 76201 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 89.301 66.614 36938000 0 0 0 1644400 2484200 0 3814400 2908800 0 3641800 5384900 4325300 3592800 4279100 4862500 1209 2024 1104 10494;10495;10496;10497;10498;10499;10500;10501;10502;10503;10504 8415;8416;8417;8418;8419;8420;8421;8422;8423;8424;8425 8421 11 AEASQLGHK Unmodified 939.47739 0.47739386 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 5.8703 5.9916 2 0.031671 3730 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 47.657 21.921 16370000 0 0 0 967850 1053800 2915400 1783400 2597800 1273100 1191700 466150 0 931250 745750 2443900 1210 5187 1105 10505;10506;10507;10508;10509;10510;10511;10512;10513;10514;10515 8426;8427 8426 2 AEASSANLGSGCEEK Acetyl (Protein N-term) 1550.6519 0.65186535 2917 Q6P1K2 PMF1 Polyamine-modulated factor 1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.25 2.49 1 11 1 1 1 1 1 1 1 1 1 1 1 1 38.37 38.992 2 2.0388E-20 37585 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 135.6 118.76 98180000 3501400 0 0 7720200 4526900 0 6438900 7529500 6107000 8755300 8488800 9696200 13639000 7570200 14207000 1211 2917 1106 10516;10517;10518;10519;10520;10521;10522;10523;10524;10525;10526;10527 8428;8429;8430;8431;8432;8433;8434;8435;8436;8437;8438;8439;8440 8430 13 AEASSGDHPTDTEMK Oxidation (M) 1590.6468 0.64677997 2080 Q02790 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.44 3.13 4 1 20 2 2 1 2 2 2 2 1 2 2 1 2 1 2 1 6.4572 5.9026 2;3 1.5977E-22 6794 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 120.55 120.55 1719300000 173240000 908800000 2288200 22793000 21169000 42297000 47869000 3379200 36363000 43634000 102560000 83002000 37313000 72815000 121740000 1212 2080 1107 10528;10529;10530;10531;10532;10533;10534;10535;10536;10537;10538;10539;10540;10541;10542;10543;10544;10545;10546;10547;10548;10549;10550;10551;10552 8441;8442;8443;8444;8445;8446;8447;8448;8449;8450;8451;8452;8453;8454;8455;8456 8448 3382 15 AEASSGDHPTDTEMK Unmodified 1574.6519 0.65186535 2080 Q02790 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.89 2.67 2 2 23 3 1 2 2 2 2 2 2 2 1 2 2 2 2 12.025 11.676 2;3 6.6341E-24 13510 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 145.31 136.73 3026600000 0 1997200000 5217100 32183000 24077000 67533000 44026000 45227000 34829000 70116000 62942000 138620000 58316000 103790000 342510000 1213 2080 1107 10553;10554;10555;10556;10557;10558;10559;10560;10561;10562;10563;10564;10565;10566;10567;10568;10569;10570;10571;10572;10573;10574;10575;10576;10577;10578;10579 8457;8458;8459;8460;8461;8462;8463;8464;8465;8466;8467;8468;8469;8470;8471;8472;8473;8474;8475;8476;8477;8478;8479 8468 21 AEASSGDHPTDTEMKEEQK Oxidation (M) 2104.8855 0.88550669 2080 Q02790 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 1 2 2 1 2 2 2 2 6.5412 6.6554 3;4 9.3456E-13 4861 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 90.385 90.12 279090000 0 0 0 13124000 12769000 10715000 26004000 10590000 10800000 25036000 17137000 43894000 29800000 29340000 49885000 1214 2080 1108 10580;10581;10582;10583;10584;10585;10586;10587;10588;10589;10590;10591;10592;10593;10594;10595;10596;10597;10598;10599;10600;10601 8480;8481;8482;8483;8484;8485;8486;8487 8485 3382 8 AEASSGDHPTDTEMKEEQK Unmodified 2088.8906 0.89059207 2080 Q02790 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 2 16 1 1 2 2 2 2 2 2 1 2 1 13.137 12.896 3;4 5.7017E-31 15580 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.9 116.87 170650000 8277800 37907000 0 0 10952000 0 13987000 11974000 0 12428000 15480000 25546000 7881800 12725000 13494000 1215 2080 1108 10602;10603;10604;10605;10606;10607;10608;10609;10610;10611;10612;10613;10614;10615;10616;10617;10618;10619 8488;8489;8490;8491;8492;8493;8494;8495;8496;8497;8498 8491 9 AEASSPVPYLSPETNPASSTSAVNHNVNLTNVR Unmodified 3422.6702 0.67023961 2136 Q07157 TJP1 Tight junction protein ZO-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 78.589 78.584 3 3.6599E-13 90852 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 40.544 38.491 16749000 0 0 0 0 2715400 3612100 0 0 0 5823800 0 4597300 0 0 0 1216 2136 1109 10620;10621;10622;10623 8499;8500;8501 8500 3 AEAVESAQAGDK Unmodified 1174.5466 0.54659564 2415 Q14566 MCM6 DNA replication licensing factor MCM6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 9.9982 10.13 2 2.6492E-08 8132 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 132.78 100.84 56492000 0 0 0 2174200 1342000 3823600 2416500 1710700 1224000 3510600 8638800 10350000 3101400 3728200 14472000 1217 2415 1110 10624;10625;10626;10627;10628;10629;10630;10631;10632;10633;10634;10635 8502;8503;8504;8505;8506;8507;8508;8509;8510;8511;8512;8513;8514 8505 13 AEAVFHAPK Acetyl (Protein N-term) 1010.5185 0.5185304 3408 Q8NCE0 TSEN2 tRNA-splicing endonuclease subunit Sen2 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 6.71 3.81 2 1 4 2 1 1 1 1 1 57.763 55.953 2 0.0017088 72687 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.429 66.826 162610000 0 135970000 9038700 0 0 0 0 0 1762500 0 4361800 4694500 0 0 6780800 1218 3408 1111 10636;10637;10638;10639;10640;10641;10642 8515;8516;8517;8518;8519 8515 4 AEAVLLR Unmodified 770.46504 0.46503826 1234 P28340 POLD1 DNA polymerase delta catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 38.223 38.352 2 0.023412 41415 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 86.512 0 129930000 0 0 0 9039200 7718300 11583000 12354000 10962000 8156400 12266000 13288000 0 12801000 12904000 18861000 1219 1234 1112 10643;10644;10645;10646;10647;10648;10649;10650;10651;10652;10653 8520;8521;8522 8522 3 AECEILMMVGLPAAGK 2 Oxidation (M) 1720.8198 0.81979907 4162 Q9BUJ2 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes yes 0 2 0 By MS/MS 2 0 1 1 83.235 78.515 2 0.002223 97565 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 63.408 48.436 17559000 0 17559000 0 0 0 0 0 0 0 0 0 0 0 0 0 1220 4162 1113 10654 8523 8523 5648;5649 1 AECEILMMVGLPAAGK Oxidation (M) 1704.8249 0.82488445 4162 Q9BUJ2 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes yes 0 1 0 By MS/MS 2 0 1 1 92.979 88.068 2 0.00083502 109278 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.245 71.5 19494000 0 19494000 0 0 0 0 0 0 0 0 0 0 0 0 0 1221 4162 1113 10655 8524 8524 5648;5649 1 AECEILMMVGLPAAGK Unmodified 1688.83 0.82996983 4162 Q9BUJ2 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 96.554 91.733 3 0.014258 113714 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 33.547 28.842 12329000 0 12329000 0 0 0 0 0 0 0 0 0 0 0 0 0 1222 4162 1113 10656 8525 8525 1 AECGASGSGSSGDSLDK Acetyl (Protein N-term) 1625.6475 0.64750825 4666 Q9NVE7 PANK4 Pantothenate kinase 4 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 25.893 26.065 2 1.4005E-46 27947 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 155.98 144.11 381490000 0 0 0 86073000 133840000 113710000 8023100 10260000 8021400 4490200 5446500 7615900 0 0 4008200 1223 4666 1114 10657;10658;10659;10660;10661;10662;10663;10664;10665;10666 8526;8527;8528;8529;8530;8531;8532;8533;8534;8535;8536 8526 11 AECRPAASENYMR Unmodified 1553.6715 0.67149535 992 P13984 GTF2F2 General transcription factor IIF subunit 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 25.434 25.68 3 7.3351E-07 25998 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.534 73.404 147650000 0 0 0 0 8616700 8435500 12418000 0 12856000 11278000 16698000 16346000 18064000 13126000 29812000 1224 992 1115 10667;10668;10669;10670;10671;10672;10673;10674;10675;10676 8537;8538;8539;8540;8541;8542;8543;8544 8540 7 AECRPAASENYMR Oxidation (M) 1569.6664 0.66640998 992 P13984 GTF2F2 General transcription factor IIF subunit 2 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 15.408 15.595 3 0.00020338 14481 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 76.728 62.375 103640000 0 0 0 5151100 5242800 5385700 0 10215000 5107600 7053500 8814600 20071000 11718000 11131000 13747000 1225 992 1115 10677;10678;10679;10680;10681;10682;10683;10684;10685;10686;10687 8545;8546;8547;8548;8549 8546 1343 5 AECSAEQCYK Unmodified 1244.4802 0.48017233 1534 P48163 ME1 NADP-dependent malic enzyme yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 13.065 10.973 2 0.013842 15345 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.256 53.48 10244000 7858900 0 0 2384800 0 0 0 0 0 0 0 0 0 0 0 1226 1534 1116 10688;10689 8550;8551 8550 2 AECTARLPEASQSPLVLK Unmodified 1969.0303 0.030260856 2272 Q13330 MTA1 Metastasis-associated protein MTA1 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 74.154 69.71 3 0.00051523 83836 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 58.83 41.95 47831000 0 47831000 0 0 0 0 0 0 0 0 0 0 0 0 0 1227 2272 1117 10690;10691 8552;8553 8553 2 AECTEESIVEQTYAPAECVSQAIDINEPIGNLK Unmodified 3677.7077 0.70767225 2128 Q06546 GABPA GA-binding protein alpha chain yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 94.424 90.372 3 6.5601E-91 111852 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.06 117.15 65355000 0 65355000 0 0 0 0 0 0 0 0 0 0 0 0 0 1228 2128 1118 10692;10693 8554;8555 8554 2 AEDADSSSGPLASSSLLAK Unmodified 1804.8691 0.86905199 2097 Q03468 ERCC6 DNA excision repair protein ERCC-6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.021 67.102 2 2.6822E-17 76777 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 119.01 108.4 68318000 0 0 0 5023800 4557000 5650400 4531100 2414700 4095300 6756300 6875200 7393900 6876300 6147200 7997000 1229 2097 1119 10694;10695;10696;10697;10698;10699;10700;10701;10702;10703;10704;10705 8556;8557;8558;8559;8560;8561;8562;8563;8564;8565;8566;8567 8565 12 AEDAVEAIR Unmodified 972.48762 0.4876242 4209 Q9BWF3;Q9BQ04 RBM4;RBM4B RNA-binding protein 4;RNA-binding protein 4B yes no 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 9 2 1 1 1 1 1 1 1 32.372 32.545 2 0.012192 34693 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 61.679 33.461 125540000 0 0 0 0 14362000 20498000 0 10571000 0 22062000 0 16969000 8543400 6766400 25766000 1230 4209 1120 10706;10707;10708;10709;10710;10711;10712;10713;10714 8568;8569;8570 8569 3 AEDAVEAIRGLDNTEFQGK Unmodified 2061.9967 0.99671212 4209 Q9BWF3;Q9BQ04 RBM4;RBM4B RNA-binding protein 4;RNA-binding protein 4B yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 75.401 75.559 3 3.8674E-07 87506 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 77.468 67.888 35905000 0 0 0 0 0 0 0 9358200 0 0 8442000 0 8731700 9373300 0 1231 4209 1121 10715;10716;10717;10718 8571;8572;8573;8574;8575 8575 5 AEDDAYTTFISETGK Unmodified 1646.7312 0.73116153 3966 Q96RE7 NACC1 Nucleus accumbens-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 73.221 72.49 2 3.4247E-41 88926 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 147.71 124.65 178340000 0 85011000 0 9669500 9470400 0 0 10127000 0 26027000 0 20740000 17291000 0 0 1232 3966 1122 10719;10720;10721;10722;10723;10724;10725;10726 8576;8577;8578;8579;8580;8581;8582;8583;8584;8585 8579 10 AEDEDIVLTPDGTR Unmodified 1529.7209 0.72093119 3521 Q8TEW0 PARD3 Partitioning defective 3 homolog yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching 10 0 5 1 1 1 1 1 56.995 57.302 2 0.0018189 65215 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 54.7 38.693 16602000 0 0 0 0 0 3767000 0 1665000 0 0 5697200 0 0 0 5472900 1233 3521 1123 10727;10728;10729;10730;10731 8586;8587 8586 2 AEDEEELLR Unmodified 1102.5142 0.51423288 2646 Q27J81 INF2 Inverted formin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 41.727 41.953 2 0.0030525 45706 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 127.02 98.803 65993000 0 0 0 5846400 0 0 6526300 0 0 0 10441000 0 16094000 11264000 15820000 1234 2646 1124 10732;10733;10734;10735;10736;10737;10738;10739;10740;10741 8588;8589;8590;8591;8592;8593;8594;8595;8596;8597;8598 8591 9 AEDEGEGGREETER Unmodified 1562.6445 0.64447178 4147 Q9BTK6 PAGR1 PAXIP1-associated glutamate-rich protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.4933 6.6145 3 7.0062E-20 4764 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 114.56 112.35 110110000 0 0 0 5400400 5860400 6070000 6020000 0 6340200 8639500 10154000 21548000 10917000 12069000 17092000 1235 4147 1125 10742;10743;10744;10745;10746;10747;10748;10749;10750;10751;10752;10753 8599;8600;8601;8602;8603;8604;8605;8606;8607;8608;8609;8610 8607 12 AEDEVQRER Unmodified 1130.5316 0.53161428 908 P0DMV9;P0DMV8 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS 7.71 3.56 4 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 6.5244 5.6822 2 1.5757E-05 7186 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 158.76 114.98 739350000 92556000 306800000 56793000 18385000 726270 29921000 40198000 21159000 27202000 12084000 37523000 601170 14512000 29404000 51486000 1236 908 1126 10754;10755;10756;10757;10758;10759;10760;10761;10762;10763;10764;10765;10766;10767;10768;10769;10770 8611;8612;8613;8614 8614 2 AEDEVQRERVSAK Unmodified 1515.7641 0.76413341 908 P0DMV9;P0DMV8 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 0 0 2 By MS/MS By matching By MS/MS 1.8 0.4 1 4 2 1 2 33.31 31.955 3 0.015354 14792 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 67.456 67.456 6678600000 1526100000 240930000 4911500000 0 0 0 0 0 0 0 0 0 0 0 0 1237 908 1127 10771;10772;10773;10774;10775 8615;8616;8617;8618 8618 4 AEDFQIEGYNPHPTIK Unmodified 1857.8897 0.88972785 787 P04818 TYMS Thymidylate synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.38 4 2 17 1 4 1 1 1 1 2 1 1 2 2 1 1 2 2 67.349 66.075 2;3 0.00020681 85078 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.943 58.029 1304200000 30525000 930430000 30306000 10024000 8331800 27418000 14395000 13335000 13096000 26533000 31639000 37996000 17609000 38038000 74516000 1238 787 1128 10776;10777;10778;10779;10780;10781;10782;10783;10784;10785;10786;10787;10788;10789;10790;10791;10792;10793;10794;10795;10796;10797;10798 8619;8620;8621;8622;8623;8624;8625;8626;8627;8628;8629;8630;8631;8632;8633;8634;8635 8622 16 AEDGATPSPSNETPK Unmodified 1499.674 0.673981 1256 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.11 3.54 3 3 21 3 2 1 2 1 1 2 2 2 2 2 1 2 2 2 27.674 27.81 2;3 5.8175E-45 92414 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 207.44 154.35 2960900000 374760000 51412000 4722200 109040000 107320000 116470000 132570000 111880000 110970000 295800000 492710000 369150000 180880000 209830000 293410000 1239 1256 1129 10799;10800;10801;10802;10803;10804;10805;10806;10807;10808;10809;10810;10811;10812;10813;10814;10815;10816;10817;10818;10819;10820;10821;10822;10823;10824;10825 8636;8637;8638;8639;8640;8641;8642;8643;8644;8645;8646;8647;8648;8649;8650;8651;8652;8653;8654;8655 8645 18 AEDGATPSPSNETPKK Unmodified 1627.7689 0.76894402 1256 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.08 2.5 2 1 22 1 2 2 2 1 2 2 1 2 2 2 2 2 2 14.691 14.39 2;3 1.2192E-23 17934 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.57 84.624 753000000 5983900 179690000 0 32881000 32463000 11850000 37658000 50003000 9230000 64012000 110670000 69709000 40870000 44516000 63461000 1240 1256 1130 10826;10827;10828;10829;10830;10831;10832;10833;10834;10835;10836;10837;10838;10839;10840;10841;10842;10843;10844;10845;10846;10847;10848;10849;10850 8656;8657;8658;8659;8660;8661;8662;8663;8664;8665;8666;8667;8668;8669;8670;8671;8672;8673;8674;8675;8676;8677;8678;8679;8680;8681 8661 22 AEDGENYDIK Unmodified 1152.4935 0.49349744 482 O75347 TBCA Tubulin-specific chaperone A yes yes 0 0 0 By MS/MS 10 0 1 1 24.09 24.758 2 0.022318 24932 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.158 36.171 14656000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14656000 1241 482 1131 10851 8682 8682 1 AEDGSVIDYELIDQDAR Unmodified 1907.8749 0.87486565 840 P07355 ANXA2 Annexin A2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 2 1 1 1 1 1 1 1 1 1 1 2 78.923 78.958 2;3 1.1856E-45 90934 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 188.09 163.8 121840000 0 0 0 19038000 6815900 9145600 5360500 6878500 4269700 6689800 7320700 10750000 5170100 9022100 31377000 1242 840 1132 10852;10853;10854;10855;10856;10857;10858;10859;10860;10861;10862;10863;10864;10865 8683;8684;8685;8686;8687;8688;8689;8690;8691;8692;8693;8694;8695;8696;8697 8686 15 AEDIENDALSPEEQEECK Unmodified 2104.8743 0.8742733 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 49.812 50.034 2 1.7365E-13 55839 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.591 91.108 5308700 0 0 0 0 0 0 0 0 0 0 0 0 0 5308700 0 1243 1601 1133 10866;10867;10868 8698;8699;8700 8698 3 AEDKPSTDLSAPVNGEATSQK Unmodified 2144.0233 0.023320802 3102 Q7Z4V5 HDGFRP2 Hepatoma-derived growth factor-related protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 39.502 38.95 3 2.2776E-15 43304 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 87.352 83.046 353360000 0 176610000 0 11034000 10227000 4263000 14131000 11362000 5474900 15762000 24417000 27540000 17015000 13264000 22257000 1244 3102 1134 10869;10870;10871;10872;10873;10874;10875;10876;10877;10878;10879;10880;10881;10882 8701;8702;8703;8704;8705;8706;8707;8708;8709;8710;8711;8712;8713;8714;8715;8716;8717 8703 17 AEDLLPEAASLSENLDISK Unmodified 2014.0106 0.010630851 5 A0JNW5 UHRF1BP1L UHRF1-binding protein 1-like yes yes 0 0 0 By MS/MS 2 0 1 1 92.86 87.949 2 7.1599E-13 109258 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 111.74 96.539 13865000 0 13865000 0 0 0 0 0 0 0 0 0 0 0 0 0 1245 5 1135 10883 8718 8718 1 AEDNADTLALVFEAPNQEK Unmodified 2073.9855 0.98547873 959 P12004 PCNA Proliferating cell nuclear antigen yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 1 1 2 2 2 2 2 2 2 2 85.61 85.673 2;3 4.8581E-264 99115 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 330.26 322.35 480030000 0 0 0 10545000 16241000 6188000 8478800 19685000 15815000 25946000 77582000 44353000 15797000 42535000 196860000 1246 959 1136 10884;10885;10886;10887;10888;10889;10890;10891;10892;10893;10894;10895;10896;10897;10898;10899;10900;10901;10902;10903;10904;10905 8719;8720;8721;8722;8723;8724;8725;8726;8727;8728;8729;8730;8731;8732;8733 8722 14 AEDNFEDIITKPPVRK Unmodified 1870.9789 0.97887721 5282 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.82 3.56 3 8 1 2 1 1 1 1 1 1 1 1 68.557 67.413 3;4 0.0033631 89483 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.595 49.595 166670000 21840000 0 21293000 0 0 0 0 9196200 8334500 11515000 17904000 16987000 11798000 11642000 36161000 1247 5282 1137 10906;10907;10908;10909;10910;10911;10912;10913;10914;10915;10916 8734;8735;8736;8737;8738 8735 2 AEDNLLALGLK Unmodified 1155.6499 0.6499385 2675 Q3T8J9 GON4L GON-4-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 80.583 80.272 2 0.0018367 92801 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 82.749 66.547 92854000 0 34774000 0 2248300 3670300 6170600 3087300 3495400 3074200 8014900 3990900 5399900 4522500 5665600 8740200 1248 2675 1138 10917;10918;10919;10920;10921;10922;10923;10924;10925;10926;10927;10928;10929 8739;8740;8741;8742;8743;8744;8745;8746;8747;8748;8749;8750;8751 8740 13 AEDQHLVEMEDTLNK Unmodified 1770.8094 0.80942862 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 61.664 60.19 2;3 5.5112E-20 68018 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.544 75.258 277840000 10350000 144620000 0 6036300 4929100 6680100 8814900 6300900 7061600 12069000 11524000 17567000 6690500 9068800 26137000 1249 1286 1139 10930;10931;10932;10933;10934;10935;10936;10937;10938;10939;10940;10941;10942;10943;10944;10945 8752;8753;8754;8755;8756;8757;8758;8759;8760;8761;8762 8755 10 AEDQHLVEMEDTLNK Oxidation (M) 1786.8043 0.80434324 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 1 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 42.155 37.656 3 0.0001684 48957 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.349 69.248 75680000 0 74213000 1466800 0 0 0 0 0 0 0 0 0 0 0 0 1250 1286 1139 10946;10947;10948 8763;8764 8763 1890 2 AEDSICLADSK Unmodified 1207.5391 0.53906742 3107 Q7Z5K2 WAPAL Wings apart-like protein homolog yes yes 0 0 0 By MS/MS 10 0 1 1 36.851 36.866 2 0.021598 40900 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 57.348 44.311 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1251 3107 1140 10949 8765 8765 1 AEDTISILPDDPR Unmodified 1440.7096 0.70963822 3544 Q8WUH1 CHURC1 Protein Churchill yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 72.339 72.659 2 0.014958 83040 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.567 43.614 22916000 0 0 0 0 0 0 0 0 0 0 5205900 7042100 0 0 10668000 1252 3544 1141 10950;10951;10952 8766 8766 1 AEDTISILPDDPRQMTLLF Oxidation (M) 2190.0878 0.087835314 3544 Q8WUH1 CHURC1 Protein Churchill yes yes 0 1 1 By MS/MS 2.5 0.5 1 1 2 97.418 93.392 3 0.00072949 115361 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 51.193 44.777 29871000 0 29871000 0 0 0 0 0 0 0 0 0 0 0 0 0 1253 3544 1142 10953;10954 8767 8767 5038 1 AEDTISILPDDPRQMTLLF Unmodified 2174.0929 0.092920692 3544 Q8WUH1 CHURC1 Protein Churchill yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 100.17 93.75 2 5.7683E-05 118140 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.001 72.314 14963000 5776000 9187500 0 0 0 0 0 0 0 0 0 0 0 0 0 1254 3544 1142 10955;10956 8768;8769 8768 2 AEDVSSAAPSPR Acetyl (Protein N-term) 1227.5731 0.57314474 1737 P54274 TERF1 Telomeric repeat-binding factor 1 yes yes 1 0 0 By MS/MS By matching By MS/MS By matching 10 0 4 1 1 1 1 41.12 41.006 2 0.0013491 46303 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 58.37 43.703 8241800 0 0 0 3901200 0 2604000 0 0 1736600 0 0 0 0 0 0 1255 1737 1143 10957;10958;10959;10960 8770;8771 8771 2 AEDYDVVK Unmodified 937.43928 0.43927702 455 O75116 ROCK2 Rho-associated protein kinase 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 28.441 28.629 2 0.034963 30351 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 52.786 18.783 54088000 0 0 0 3791200 2109900 5361100 3026100 3820000 0 7438000 7752200 5807500 5306000 0 9676100 1256 455 1144 10961;10962;10963;10964;10965;10966;10967;10968;10969;10970 8772;8773;8774 8772 3 AEDYEENLQVMR Oxidation (M) 1511.6562 0.65622244 2072 Q02241 KIF23 Kinesin-like protein KIF23 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 45.735 45.967 2 8.0359E-05 51529 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 87.258 75.725 90012000 0 0 0 5826400 0 9110800 7291800 5799800 5339500 10588000 8037500 11490000 11220000 4649600 10658000 1257 2072 1145 10971;10972;10973;10974;10975;10976;10977;10978;10979;10980;10981 8775;8776;8777;8778;8779;8780;8781;8782;8783;8784;8785;8786 8777 3362 12 AEDYEENLQVMR Unmodified 1495.6613 0.66130782 2072 Q02241 KIF23 Kinesin-like protein KIF23 yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 59.64 59.719 2 0.00012799 67964 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 103.7 89.01 33194000 0 0 0 0 3793000 4933700 4089500 0 0 6465300 6153100 0 4078400 3681000 0 1258 2072 1145 10982;10983;10984;10985;10986;10987;10988;10989;10990 8787;8788;8789;8790;8791;8792;8793 8789 7 AEEAAVVAEQEDLLR Unmodified 1641.821 0.82097959 3665 Q92805 GOLGA1 Golgin subfamily A member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 73.865 73.885 2 6.4023E-11 85166 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 117.79 55.329 40352000 0 0 0 3205700 3933100 0 3841700 3205300 4971000 4096000 0 7739500 4434300 4925200 0 1259 3665 1146 10991;10992;10993;10994;10995;10996;10997;10998;10999 8794;8795;8796;8797;8798;8799;8800;8801;8802 8794 9 AEEDAALQAK Unmodified 1044.5088 0.50875357 2289 Q13428 TCOF1 Treacle protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19.013 18.603 2 0.0009285 18767 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 112.84 56.831 323650000 197570 8646300 0 15987000 19382000 23189000 16916000 15437000 22669000 30949000 33515000 39412000 30513000 23311000 43522000 1260 2289 1147 11000;11001;11002;11003;11004;11005;11006;11007;11008;11009;11010;11011;11012;11013 8803;8804;8805;8806;8807;8808;8809;8810;8811;8812;8813;8814;8815;8816 8814 11 AEEDEILNR Unmodified 1087.5146 0.51456723 1227 P27824 CANX Calnexin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.822 36.004 2 0.0034957 40273 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 107.29 85.995 327860000 0 0 0 22836000 24414000 28654000 21409000 21552000 18175000 30301000 31360000 45876000 24452000 28677000 30151000 1261 1227 1148 11014;11015;11016;11017;11018;11019;11020;11021;11022;11023;11024;11025 8817;8818;8819;8820;8821;8822;8823;8824;8825 8824 8 AEEDEILNRSPR Unmodified 1427.7005 0.70047052 1227 P27824 CANX Calnexin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.676 37.856 3 1.59E-05 41281 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 85.845 72.967 399180000 0 0 0 16806000 19564000 23538000 38173000 29873000 24386000 33426000 40801000 44180000 66604000 27153000 34677000 1262 1227 1149 11026;11027;11028;11029;11030;11031;11032;11033;11034;11035;11036;11037 8826;8827;8828;8829;8830;8831;8832;8833;8834;8835;8836;8837;8838;8839 8837 14 AEEDGRAQAAGSSVLR Unmodified 1615.7914 0.79141079 3816 Q96EK9 KTI12 Protein KTI12 homolog yes yes 0 0 1 By matching By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 28.676 28.791 3 0.016646 31025 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 24.538 12.046 18106000 0 0 0 0 3115700 0 4026900 0 3241400 0 0 0 0 0 7722400 1263 3816 1150 11038;11039;11040;11041 8840 8840 1 AEEDKLEQIK Unmodified 1201.619 0.6190323 983 P13674 P4HA1 Prolyl 4-hydroxylase subunit alpha-1 yes yes 0 0 1 By MS/MS 2.33 0.471 2 1 3 33.294 28.705 2;3 0.0063357 37707 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.47 52.766 128630000 0 128630000 0 0 0 0 0 0 0 0 0 0 0 0 0 1264 983 1151 11042;11043;11044 8841;8842;8843 8842 1 AEEDPEAADSGEPQNK Unmodified 1685.7017 0.70165231 4739 Q9NYB0 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 17.277 17.492 2 7.168E-06 17141 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 78.692 69.005 28866000 0 0 0 0 1246500 2601900 1681400 1706000 1236300 2655200 3353800 4094400 3585600 2244500 4460600 1265 4739 1152 11045;11046;11047;11048;11049;11050;11051;11052;11053;11054;11055 8844;8845;8846;8847;8848;8849;8850;8851;8852;8853;8854 8853 11 AEEDTQFNYHR Unmodified 1408.6008 0.60075648 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 28.223 28.423 3 0.00060166 30159 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.143 74.003 103170000 0 0 0 5187400 6969000 5124600 9307000 7313500 0 7686800 13037000 14092000 8443600 8785800 17228000 1266 2431 1153 11056;11057;11058;11059;11060;11061;11062;11063;11064;11065;11066 8855;8856;8857;8858;8859;8860 8860 6 AEEDTQFNYHRK Unmodified 1536.6957 0.69571949 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20.446 19.8 3 5.1667E-15 25417 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 123.8 118.65 262820000 17381000 5784500 37979000 6870400 7739700 25051000 11338000 14109000 14670000 21303000 18616000 18861000 17475000 17634000 28004000 1267 2431 1154 11067;11068;11069;11070;11071;11072;11073;11074;11075;11076;11077;11078;11079;11080;11081 8861;8862;8863;8864;8865;8866;8867;8868;8869;8870;8871;8872;8873;8874 8869 13 AEEDVEPECIMEK Unmodified 1577.6589 0.65892456 4940 Q9UJU6 DBNL Drebrin-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.72 55.842 2 9.6934E-05 63223 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 101.93 95.326 71311000 0 0 0 4688700 3734500 3970500 3247300 0 2563700 6185800 9643700 7821600 4593900 7026900 17834000 1268 4940 1155 11082;11083;11084;11085;11086;11087;11088;11089;11090;11091;11092;11093 8875;8876;8877;8878;8879;8880;8881;8882;8883;8884;8885;8886;8887;8888 8881 14 AEEDVEPECIMEK Oxidation (M) 1593.6538 0.65383918 4940 Q9UJU6 DBNL Drebrin-like protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 40.13 39.954 2 0.00025016 44281 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 80.763 78.822 9627000 0 0 0 3002700 1811600 0 0 0 0 0 4812700 0 0 0 0 1269 4940 1155 11094;11095;11096;11097 8889;8890 8889 6281 2 AEEEAEAKPK Unmodified 1100.535 0.53496832 4168 Q9BUQ8 DDX23 Probable ATP-dependent RNA helicase DDX23 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 6.2956 2.9948 2 0.033182 5040 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.67 50.862 12716000 0 12716000 0 0 0 0 0 0 0 0 0 0 0 0 0 1270 4168 1156 11098;11099 8891;8892 8891 2 AEEEAQSLFVTECIK Unmodified 1752.824 0.82401605 4258 Q9BZ29 DOCK9 Dedicator of cytokinesis protein 9 yes yes 0 0 0 By MS/MS 2 0 1 1 79.746 75.033 2 8.9814E-08 93464 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.39 105.71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1271 4258 1157 11100 8893 8893 1 AEEEFNIEK Unmodified 1107.5084 0.50841922 1375 P36543;Q96A05 ATP6V1E1;ATP6V1E2 V-type proton ATPase subunit E 1;V-type proton ATPase subunit E 2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 41.91 41.333 2 0.0032866 45899 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 93.267 77.852 320950000 0 173630000 0 0 6634900 15505000 10714000 8351900 9053100 13478000 14053000 20878000 11298000 12028000 25324000 1272 1375 1158 11101;11102;11103;11104;11105;11106;11107;11108;11109;11110;11111;11112;11113 8894;8895;8896;8897;8898;8899;8900;8901;8902;8903;8904;8905 8904 11 AEEELGELEAK Unmodified 1216.5823 0.58231244 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 47.56 46.179 2 1.8252E-06 58263 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.73 76.651 353320000 14159000 89439000 0 11547000 10336000 20944000 13346000 14117000 12119000 23736000 31385000 23664000 24828000 28513000 35188000 1273 5071 1159 11114;11115;11116;11117;11118;11119;11120;11121;11122;11123;11124;11125;11126;11127;11128;11129 8906;8907;8908;8909;8910;8911;8912;8913;8914;8915;8916;8917;8918;8919 8910 14 AEEELSIDK Unmodified 1032.4975 0.49752018 329 O43432 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 33.861 34.081 2 0.015207 36177 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 57.59 30.897 8586000 0 0 0 0 0 0 0 0 3367100 0 0 0 0 5218900 0 1274 329 1160 11130;11131 8920 8920 1 AEEENEFQIPGR Unmodified 1417.6474 0.64737232 3301 Q8N0X7 SPG20 Spartin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 57.621 57.74 2 5.0022E-43 65889 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 213.8 195.26 569540000 0 0 0 29608000 39850000 46242000 26190000 29663000 28963000 40091000 48344000 89224000 79771000 51890000 59706000 1275 3301 1161 11132;11133;11134;11135;11136;11137;11138;11139;11140;11141;11142;11143 8921;8922;8923;8924;8925;8926;8927;8928;8929;8930 8927 10 AEEERLRQEAK Unmodified 1357.695 0.69499121 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 2 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 13.906 10.691 3 0.01526 13769 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 78.488 49.532 222460000 64889000 17540000 140030000 0 0 0 0 0 0 0 0 0 0 0 0 1276 2378 1162 11144;11145;11146 8931;8932 8932 2 AEEETDEEKPK Unmodified 1303.578 0.57795535 4905 Q9UHP3 USP25 Ubiquitin carboxyl-terminal hydrolase 25 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 6.6468 3.346 3 0.039722 5382 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 33.632 25.528 19714000 0 19714000 0 0 0 0 0 0 0 0 0 0 0 0 0 1277 4905 1163 11147;11148 8933 8933 1 AEEETRMENSLPAK Unmodified 1603.7512 0.75118546 2994 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 2 1 1 1 1 2 2 1 2 33.495 33.67 2;3 0.00094483 35820 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.532 27.954 276050000 0 0 0 17281000 26370000 16041000 18242000 17680000 0 31505000 44621000 0 38970000 19105000 46237000 1278 2994 1164 11149;11150;11151;11152;11153;11154;11155;11156;11157;11158;11159;11160;11161;11162 8934;8935;8936;8937;8938;8939 8936 5 AEEETRMENSLPAK Oxidation (M) 1619.7461 0.74610008 2994 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes yes 0 1 1 By MS/MS By MS/MS 5 3.56 1 1 1 2 1 21.641 17.786 3 0.0088914 23433 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 46.318 37.719 25863000 0 25863000 0 0 0 0 0 0 0 0 0 0 0 0 0 1279 2994 1164 11163;11164;11165 8940;8941 8941 4608 2 AEEFVVLSQEPSVTETIAPK Unmodified 2173.1154 0.11543027 3915 Q96L91 EP400 E1A-binding protein p400 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.24 3.19 2 2 13 4 1 1 1 1 2 2 2 2 1 85.23 84.167 2;3 6.023E-09 104008 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.03 99.875 236080000 0 155640000 0 0 0 4582700 3838400 0 0 0 7018000 28152000 12710000 13912000 10227000 1280 3915 1165 11166;11167;11168;11169;11170;11171;11172;11173;11174;11175;11176;11177;11178;11179;11180;11181;11182 8942;8943;8944;8945;8946;8947;8948;8949;8950;8951;8952;8953;8954 8944 13 AEEGIAAGGVMDVNTALQEVLK Acetyl (Protein N-term);Oxidation (M) 2272.1257 0.12567738 1188 P25398 RPS12 40S ribosomal protein S12 yes yes 1 1 0 By MS/MS By MS/MS 2 0.707 2 4 2 3 5 100.82 97.534 2;3 2.979E-50 116722 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.18 125.51 556980000 119290000 437690000 0 0 0 0 0 0 0 0 0 0 0 0 0 1281 1188 1166 11183;11184;11185;11186;11187;11188;11189;11190 8955;8956;8957;8958;8959;8960;8961;8962 8955 1719 8 AEEGIAAGGVMDVNTALQEVLK Acetyl (Protein N-term) 2256.1308 0.13076276 1188 P25398 RPS12 40S ribosomal protein S12 yes yes 1 0 0 By MS/MS By MS/MS 2.11 0.737 2 4 3 5 4 101.89 98.551 2;3 1.4547E-106 118561 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 228.19 220.43 1040700000 180860000 859850000 0 0 0 0 0 0 0 0 0 0 0 0 0 1282 1188 1166 11191;11192;11193;11194;11195;11196;11197;11198;11199 8963;8964;8965;8966;8967;8968;8969;8970;8971 8963 9 AEEHQRQNINK Unmodified 1365.6749 0.67492447 690 O95785 WIZ Protein Wiz yes yes 0 0 1 By MS/MS By matching 2 0 2 1 1 5.6859 2.377 3 0.00021692 5194 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.813 78.155 120400000 113810000 6588900 0 0 0 0 0 0 0 0 0 0 0 0 0 1283 690 1167 11200;11201 8972 8972 1 AEEIANEMIEAAK Unmodified 1417.6759 0.67589525 1578 P49588 AARS Alanine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 4 8 2 1 1 1 1 1 1 1 1 1 1 68.961 67.064 2 8.0898E-05 76176 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 103.34 66.15 1174800000 38421000 1082300000 0 1697900 0 5661700 0 0 0 2701800 6379800 6606800 2587000 4896700 23477000 1284 1578 1168 11202;11203;11204;11205;11206;11207;11208;11209;11210;11211;11212;11213 8973;8974;8975;8976;8977;8978;8979;8980;8981;8982 8976 9 AEEIANEMIEAAK Oxidation (M) 1433.6708 0.67080988 1578 P49588 AARS Alanine--tRNA ligase, cytoplasmic yes yes 0 1 0 By MS/MS 2.33 0.471 2 1 3 43.488 38.442 2 0.00047234 49485 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.767 76.228 57991000 0 57991000 0 0 0 0 0 0 0 0 0 0 0 0 0 1285 1578 1168 11214;11215;11216 8983;8984 8983 2529 2 AEEIEQLHEVIEK Unmodified 1565.7937 0.7937022 672 O95613 PCNT Pericentrin yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 68.185 62.892 3 0.0082337 80508 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 47.606 14.415 21279000 0 21279000 0 0 0 0 0 0 0 0 0 0 0 0 0 1286 672 1169 11217;11218 8985;8986;8987 8986 3 AEEILEK Unmodified 830.43855 0.43854874 1929 P62913 RPL11 60S ribosomal protein L11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.8 3.37 1 2 7 1 2 1 1 1 1 1 1 1 24.345 23.263 2 0.022716 25446 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 104.21 30.593 1204700000 500720 321270000 0 61962000 0 0 0 71098000 0 0 114270000 174150000 165530000 129280000 166670000 1287 1929 1170 11219;11220;11221;11222;11223;11224;11225;11226;11227;11228 8988;8989;8990;8991;8992 8992 5 AEEILRQELEK Unmodified 1356.7249 0.72489436 2933 Q6P3X3 TTC27 Tetratricopeptide repeat protein 27 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 47.204 46.851 3 0.0094539 52654 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 45.939 19.928 124630000 0 0 62473000 3589100 0 11942000 0 0 0 10443000 0 12807000 9892100 0 13486000 1288 2933 1171 11229;11230;11231;11232;11233;11234;11235 8993;8994 8993 1 AEEIVAAQEK Unmodified 1086.5557 0.55570376 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 23.896 24.135 2 0.0029157 24807 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 78.816 53.079 38185000 0 0 0 0 1833000 3415400 2196300 2764700 0 3508600 5124000 7459200 0 3636000 8248100 1289 5189 1172 11236;11237;11238;11239;11240;11241;11242;11243;11244 8995;8996;8997;8998 8997 4 AEELAAR Unmodified 758.39227 0.39226725 2100 Q04323 UBXN1 UBX domain-containing protein 1 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 11.197 11.311 2 0.02407 9515 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.07 20.613 2962900 0 0 0 675870 0 0 0 0 0 0 0 0 0 0 2287000 1290 2100 1173 11245;11246 8999 8999 1 AEELHYPLGER Unmodified 1312.6412 0.64116473 2400 Q14257 RCN2 Reticulocalbin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.522 47.685 3 0.0009536 53659 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 66.486 59.598 266890000 0 0 0 8721700 9941700 16840000 12717000 12887000 12610000 26852000 27266000 42294000 21962000 24141000 50652000 1291 2400 1174 11247;11248;11249;11250;11251;11252;11253;11254;11255;11256;11257;11258 9000;9001;9002;9003;9004;9005;9006;9007;9008;9009;9010;9011 9008 12 AEELLAEEK Unmodified 1030.5183 0.51825563 154 O00429 DNM1L Dynamin-1-like protein yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.37 3.9 3 2 1 13 3 3 1 1 1 1 2 1 1 1 1 1 1 1 46.899 46.769 2 1.6432E-06 44277 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 164.57 124.92 1125700000 60300000 485910000 0 29752000 22004000 55887000 39924000 32465000 40842000 65036000 46437000 63526000 57801000 37216000 88556000 1292 154 1175 11259;11260;11261;11262;11263;11264;11265;11266;11267;11268;11269;11270;11271;11272;11273;11274;11275;11276;11277 9012;9013;9014;9015;9016;9017;9018;9019;9020;9021;9022;9023;9024;9025;9026;9027;9028;9029;9030 9016 19 AEELPSEK Unmodified 901.43928 0.43927702 3723 Q969S3 ZNF622 Zinc finger protein 622 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 18.788 19.058 2 0.0075386 18283 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.296 54.19 23821000 0 0 0 0 1233300 0 1035200 0 2532600 0 4403400 4139300 5708600 0 4768400 1293 3723 1176 11278;11279;11280;11281;11282;11283;11284 9031;9032;9033 9031 3 AEELSPAALSPSLEPIR Unmodified 1778.9414 0.94142907 2186 Q12774 ARHGEF5 Rho guanine nucleotide exchange factor 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 82.958 83.014 2 0.00021939 96125 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 66.498 59.119 8601100 0 0 0 0 2528200 0 1753100 1753600 0 2566200 0 0 0 0 0 1294 2186 1177 11285;11286;11287;11288 9034;9035;9036;9037 9034 4 AEEMDTEDRPEASGVDTEPR Oxidation (M) 2248.939 0.93899883 3321 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 yes yes 0 1 1 By MS/MS 10 0 1 1 28.86 29.014 3 1.8861E-07 31330 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 66.827 62.832 6845400 0 0 0 0 0 0 0 0 0 6845400 0 0 0 0 0 1295 3321 1178 11289 9038 9038 4910 1 AEEMDTEDRPEASGVDTEPR Unmodified 2232.9441 0.9440842 3321 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 36.846 37.205 3 4.0264E-08 40272 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.073 68.311 31421000 0 0 0 0 0 0 5251100 0 0 0 0 0 6900800 6009400 13260000 1296 3321 1178 11290;11291;11292;11293 9039;9040;9041;9042 9040 4 AEEMLSK Oxidation (M) 822.37932 0.3793193 1934 P62993 GRB2 Growth factor receptor-bound protein 2 yes yes 0 1 0 By MS/MS 2 0 1 1 7.7308 4.4832 2 0.041144 6819 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.741 35.022 22539000 0 22539000 0 0 0 0 0 0 0 0 0 0 0 0 0 1297 1934 1179 11294 9043 9043 1 AEENALQQK Unmodified 1029.5091 0.50908792 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 11.494 11.641 2 0.0030241 10463 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 91.626 48.757 40365000 0 0 0 5298400 2560300 1951600 2119600 9147100 1274400 3229100 1902100 5900300 2968600 1447400 2566100 1298 1029 1180 11295;11296;11297;11298;11299;11300;11301;11302;11303;11304;11305;11306 9044;9045;9046;9047;9048;9049 9046 6 AEEPSDLIGPEAPK Unmodified 1451.7144 0.71438925 3346 Q8N5F7 NKAP NF-kappa-B-activating protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.454 58.569 2 0.0010325 66605 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 72.531 59.077 57257000 0 0 0 3841300 4450900 3830600 4587500 4277700 3283900 5331700 6843600 4897700 4663200 4959200 6289900 1299 3346 1181 11307;11308;11309;11310;11311;11312;11313;11314;11315;11316;11317;11318 9050;9051;9052;9053;9054;9055;9056;9057;9058 9051 7 AEEQLLSK Unmodified 916.48656 0.48656157 3830 Q96EZ8 MCRS1 Microspherule protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.351 26.551 2 0.0089203 28864 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 84.568 41.444 93409000 0 0 0 5147600 5751800 7484500 7587100 6826000 5134100 8222300 9887200 11488000 9962500 6716400 9202000 1300 3830 1182 11319;11320;11321;11322;11323;11324;11325;11326;11327;11328;11329;11330 9059;9060;9061;9062;9063 9063 3 AEEQPQVELFVK Acetyl (Protein N-term) 1457.7402 0.74021007 140 O00299 CLIC1 Chloride intracellular channel protein 1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.45 3.94 1 6 2 11 4 3 2 1 1 1 1 1 1 1 1 1 1 1 85.517 84.663 2 1.8953E-08 97359 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 119.68 103.01 1587800000 868250000 153510000 9432800 12341000 11744000 0 23283000 0 15523000 21990000 89673000 81427000 15482000 66741000 218360000 1301 140 1183 11331;11332;11333;11334;11335;11336;11337;11338;11339;11340;11341;11342;11343;11344;11345;11346;11347;11348;11349;11350 9064;9065;9066;9067;9068;9069;9070;9071;9072;9073;9074;9075;9076;9077;9078;9079;9080 9078 16 AEEQVNR Acetyl (Protein N-term) 886.41446 0.41445926 4568 Q9NQE9 HINT3 Histidine triad nucleotide-binding protein 3 yes yes 1 0 0 By matching By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 15.55 15.8 2 0.03059 15487 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 44.721 31.05 11758000 0 0 0 0 0 0 0 2489700 2036200 2467200 4765300 0 0 0 0 1302 4568 1184 11351;11352;11353;11354 9081 9081 1 AEETQGNVDEASLK Unmodified 1489.6896 0.68963106 2970 Q6T4R5 NHS Nance-Horan syndrome protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 28.734 29.13 2 0.00094259 31436 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 76.522 65.999 36420000 0 0 0 0 0 0 0 0 0 12610000 0 0 15671000 0 8139600 1303 2970 1185 11355;11356;11357 9082;9083;9084 9082 3 AEEVATFFAK Unmodified 1111.555 0.55497548 945 P11387 TOP1 DNA topoisomerase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 2 1 1 1 67.978 68.076 2 0.0029838 78071 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 78.149 37.881 28885000 0 0 0 0 0 12790000 0 11225000 0 1902000 0 0 2967900 0 0 1304 945 1186 11358;11359;11360;11361;11362;11363;11364;11365 9085;9086;9087;9088;9089;9090;9091 9085 6 AEEVEYYYR Unmodified 1220.535 0.53496832 4321 Q9H0B6 KLC2 Kinesin light chain 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 45.156 45.286 2 0.0062061 49960 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 75.692 34.663 18608000 0 0 0 0 0 4162300 4641400 0 0 5990500 0 0 0 3814000 0 1305 4321 1187 11366;11367;11368;11369 9092;9093;9094;9095 9095 3 AEEVEYYYRR Unmodified 1376.6361 0.63607935 4321 Q9H0B6 KLC2 Kinesin light chain 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 37.578 37.887 3 0.0015565 41533 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 59.426 30.523 70959000 0 0 0 0 0 9768700 6653200 8836900 7950900 10116000 1627600 11025000 0 0 14980000 1306 4321 1188 11370;11371;11372;11373;11374;11375;11376;11377 9096;9097;9098 9098 3 AEEVFYAVK Unmodified 1054.5335 0.53351176 117 O00141 SGK1 Serine/threonine-protein kinase Sgk1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 54.336 54.47 2 0.0036184 62843 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 109.86 91.827 109700000 0 0 0 7061000 8963700 9747500 9443000 8705000 0 9227700 11421000 15260000 7902900 7700300 14268000 1307 117 1189 11378;11379;11380;11381;11382;11383;11384;11385;11386;11387;11388 9099;9100;9101;9102;9103;9104 9104 5 AEEVVVVAK Acetyl (Protein N-term) 984.54916 0.54916182 1035 P16333 NCK1 Cytoplasmic protein NCK1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.58 3.17 1 1 10 2 1 1 1 1 1 1 1 1 1 1 68.78 68.661 2 0.001456 89613 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 105.57 61.173 161800000 98837000 0 0 4495900 0 0 4432100 4878700 3112600 6822600 7797400 8798600 4458200 6229200 11940000 1308 1035 1190 11389;11390;11391;11392;11393;11394;11395;11396;11397;11398;11399;11400 9105;9106;9107;9108;9109;9110;9111;9112;9113 9108 9 AEEVYAQLQK Unmodified 1177.5979 0.59790293 2765 Q5T0F9 CC2D1B Coiled-coil and C2 domain-containing protein 1B yes yes 0 0 0 By MS/MS 2 0 1 1 44.824 39.502 2 0.0030854 51425 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.37 77.409 18190000 0 18190000 0 0 0 0 0 0 0 0 0 0 0 0 0 1309 2765 1191 11401 9114 9114 1 AEEWGVQYVETSAK Unmodified 1595.7468 0.74675201 941 P11234 RALB Ras-related protein Ral-B yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 70.338 69.471 2 0.0020674 79893 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 52.247 34.581 20863000 0 13966000 0 0 0 0 1119500 1180900 0 1878500 0 2718300 0 0 0 1310 941 1192 11402;11403;11404;11405;11406 9115;9116;9117 9115 1 AEEYEFLTPVEEAPK Unmodified 1750.8301 0.83014729 1689 P52565 ARHGDIA Rho GDP-dissociation inhibitor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 80.07 79.761 2 4.5863E-27 91893 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 167.2 158.75 667530000 0 33212000 0 15788000 10208000 15810000 16682000 21652000 11937000 24166000 80129000 77979000 19391000 71905000 268670000 1311 1689 1193 11407;11408;11409;11410;11411;11412;11413;11414;11415;11416;11417;11418;11419 9118;9119;9120;9121;9122;9123;9124;9125;9126;9127;9128;9129;9130 9122 13 AEEYTEETEEREESTTGFDK Unmodified 2378.9874 0.98738881 5122 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 2 1 1 1 1 1 1 1 1 43.951 42.801 3 3.8008E-47 48071 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 122.57 121.61 178360000 6857300 14138000 0 10474000 8654600 15772000 0 9257700 11651000 12485000 22005000 21465000 13525000 13676000 18403000 1312 5122 1194 11420;11421;11422;11423;11424;11425;11426;11427;11428;11429;11430;11431;11432;11433;11434 9131;9132;9133;9134;9135;9136;9137;9138;9139;9140;9141;9142;9143;9144;9145;9146;9147;9148 9139 18 AEFAAPSTDAPDK Unmodified 1318.6041 0.60411052 3749 Q96B26 EXOSC8 Exosome complex component RRP43 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 39.294 39.751 2 3.6448E-05 43733 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 89.266 67.416 47011000 0 0 0 0 0 0 0 0 0 7774600 0 9153400 8813900 7951300 13318000 1313 3749 1195 11435;11436;11437;11438;11439;11440;11441;11442;11443;11444;11445 9149;9150;9151;9152;9153;9154;9155;9156;9157;9158;9159 9157 11 AEFAERSVAK Unmodified 1106.572 0.57202253 90;853;831 CON__Q3SX28;P06753;P07951 TPM3;TPM2 Tropomyosin alpha-3 chain;Tropomyosin beta chain no no 0 0 1 By MS/MS 2 0 1 1 22.434 19.568 2 0.021989 24959 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 93.667 54.021 + 7584500 0 0 7584500 0 0 0 0 0 0 0 0 0 0 0 0 1314 90;831;853 1196 11446 9160 9160 1 AEFAEVSK Unmodified 879.4338 0.43379771 64 CON__P02768-1;P02768 ALB Serum albumin yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 26.1 26.237 2 0.005566 28321 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 106.36 29.51 + 1748900000 0 0 0 625280000 40662000 42786000 25471000 869500000 33004000 0 0 84439000 0 0 27738000 1315 64 1197 11447;11448;11449;11450;11451;11452;11453;11454;11455 9161;9162;9163;9164;9165;9166;9167;9168;9169;9170;9171 9162 11 AEFEVHEVYAVDVLVSSGEGK Unmodified 2263.1008 0.10084284 5067 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.56 0.497 19 24 35 7 1 99.015 93.781 2;3 6.0132E-105 88552 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 140.32 139.09 384140000 341630000 30850000 11656000 0 0 0 0 0 0 0 0 0 0 0 0 1316 5067 1198 11456;11457;11458;11459;11460;11461;11462;11463;11464;11465;11466;11467;11468;11469;11470;11471;11472;11473;11474;11475;11476;11477;11478;11479;11480;11481;11482;11483;11484;11485;11486;11487;11488;11489;11490;11491;11492;11493;11494;11495;11496;11497;11498 9172;9173;9174;9175;9176;9177;9178;9179;9180;9181;9182;9183;9184;9185;9186;9187;9188;9189;9190;9191;9192;9193;9194;9195;9196;9197;9198;9199;9200;9201;9202;9203;9204;9205;9206;9207;9208;9209;9210;9211;9212;9213;9214;9215;9216;9217;9218;9219;9220;9221;9222;9223;9224;9225;9226;9227;9228;9229;9230;9231;9232 9174 55 AEFFADVVPAVRK Unmodified 1447.7823 0.78234966 4914 Q9UHY7 ENOPH1 Enolase-phosphatase E1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 78.294 77.472 3 0.007286 98236 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 40.373 33.003 53870000 0 22433000 0 0 0 1509200 0 0 0 0 3477000 0 0 3448100 23003000 1317 4914 1199 11499;11500;11501;11502;11503 9233;9234;9235 9233 3 AEFGDFDIK Unmodified 1040.4815 0.48147619 3244 Q8IWS0 PHF6 PHD finger protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.482 71.554 2 0.02342 82362 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.066 40.193 73359000 0 0 0 3877000 3555800 4693900 4600500 5416500 3542700 6459500 7782800 11929000 4959000 5787200 10755000 1318 3244 1200 11504;11505;11506;11507;11508;11509;11510;11511;11512;11513;11514;11515 9236 9236 1 AEFGPPGPGAGSR Unmodified 1198.5731 0.57308516 4394 Q9H4A4 RNPEP Aminopeptidase B yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 38.754 39.268 2 0.036372 42442 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.057 22.827 32955000 0 0 0 0 0 0 0 0 0 0 0 0 0 7239500 25716000 1319 4394 1201 11516;11517 9237 9237 1 AEFHHSIMSQYK Unmodified 1476.682 0.68198369 2075 Q02413 DSG1 Desmoglein-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 34.526 34.714 3 0.00010587 37552 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 70.089 48.86 164560000 0 0 0 24841000 0 35498000 0 37384000 7953200 8748700 22645000 19044000 0 8449500 0 1320 2075 1202 11518;11519;11520;11521;11522;11523;11524;11525 9238;9239;9240;9241;9242;9243;9244 9240 7 AEFHHSIMSQYK Oxidation (M) 1492.6769 0.67689831 2075 Q02413 DSG1 Desmoglein-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 22.348 22.701 3 0.0011081 22971 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 59.13 47.895 152030000 0 0 0 0 0 0 6288400 51323000 8320300 0 15347000 35085000 23780000 0 11888000 1321 2075 1202 11526;11527;11528;11529;11530;11531;11532 9245;9246;9247;9248 9248 3364 4 AEFIVGGK Unmodified 819.44905 0.44905385 1551 P48729 CSNK1A1 Casein kinase I isoform alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 41.03 41.246 2 0.027721 44247 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 57.177 27.867 534660000 0 0 0 0 51939000 55686000 0 0 54680000 0 84465000 0 67541000 74843000 145510000 1322 1551 1203 11533;11534;11535;11536;11537;11538;11539 9249 9249 1 AEFLDDQETR Acetyl (Protein N-term) 1264.5572 0.55716033 186 O14545 TRAFD1 TRAF-type zinc finger domain-containing protein 1 yes yes 1 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 13 1 1 1 1 1 1 1 2 1 1 1 1 73.78 73.846 2 0.00046683 85357 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 92.062 81.539 113370000 0 0 0 5848400 6482500 8245400 6458800 7318700 5124900 10680000 14226000 12904000 10707000 11876000 13500000 1323 186 1204 11540;11541;11542;11543;11544;11545;11546;11547;11548;11549;11550;11551;11552 9250;9251;9252;9253;9254;9255;9256 9254 7 AEFPSYLLGGR Unmodified 1208.619 0.61897272 2891 Q6KC79 NIPBL Nipped-B-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 80.682 80.831 2 0.0075505 93146 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.751 43.041 11194000 0 0 0 0 0 0 0 0 0 0 0 3613200 2451600 0 5129600 1324 2891 1205 11553;11554;11555 9257;9258;9259 9257 3 AEFQEEAK Unmodified 950.43453 0.434526 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 15.729 15.595 2 0.006537 15568 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 126.67 47.07 449130000 0 27617000 0 80064000 22827000 20424000 28255000 90233000 14982000 23917000 36680000 52558000 0 23446000 28130000 1325 1029 1206 11556;11557;11558;11559;11560;11561;11562;11563;11564;11565;11566;11567;11568 9260;9261;9262;9263;9264;9265;9266;9267;9268;9269 9261 9 AEFRSALQHEK Unmodified 1314.668 0.66804818 465 O75153 CLUH Clustered mitochondria protein homolog yes yes 0 0 1 By MS/MS 2 0 2 2 30.155 24.512 2;3 0.019972 34462 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.827 39.22 135760000 135760000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1326 465 1207 11569;11570 9270;9271 9270 2 AEFTSPPSLFK Unmodified 1222.6234 0.6233894 2974 Q6UN15 FIP1L1 Pre-mRNA 3'-end-processing factor FIP1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 77.778 76.65 2 2.0677E-05 87987 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 123.86 103.34 393440000 2085500 155550000 6980100 9985700 10544000 14864000 15658000 15010000 13545000 23491000 18197000 29654000 17980000 21762000 38137000 1327 2974 1208 11571;11572;11573;11574;11575;11576;11577;11578;11579;11580;11581;11582;11583;11584;11585;11586 9272;9273;9274;9275;9276;9277;9278;9279;9280;9281;9282;9283;9284;9285;9286;9287;9288 9278 16 AEFVEVTK Unmodified 921.48075 0.48074791 65 CON__P02769 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39.499 38.796 2 0.005648 43808 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 106.04 65.939 + 3029200000 11040000 205320000 0 299400000 349120000 153280000 171820000 137610000 138170000 388570000 353230000 290230000 159310000 164070000 207990000 1328 65 1209 11587;11588;11589;11590;11591;11592;11593;11594;11595;11596;11597;11598;11599;11600 9289;9290;9291;9292;9293;9294;9295;9296;9297;9298;9299;9300 9299 11 AEGAATEEEGTPK Unmodified 1288.5783 0.5782897 1993 P80723 BASP1 Brain acid soluble protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.78 3.6 1 3 1 13 2 2 1 1 1 1 1 1 1 1 2 1 1 1 1 17.401 17.093 2 4.5689E-30 92641 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 165.11 105.31 1489100000 461730000 95513000 3943800 37064000 46040000 64044000 44964000 59443000 64484000 69836000 73032000 164440000 92400000 95533000 116590000 1329 1993 1210 11601;11602;11603;11604;11605;11606;11607;11608;11609;11610;11611;11612;11613;11614;11615;11616;11617;11618 9301;9302;9303;9304;9305;9306;9307;9308;9309;9310;9311;9312;9313;9314;9315;9316;9317;9318;9319;9320;9321 9311 21 AEGDISNVANGFK Unmodified 1320.631 0.63099397 4831 Q9UBB4 ATXN10 Ataxin-10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.565 55.693 2 5.1062E-75 62388 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 236.32 206.9 342390000 0 0 0 14521000 15831000 38693000 21216000 21080000 12978000 44905000 33420000 31792000 24725000 27073000 56158000 1330 4831 1211 11619;11620;11621;11622;11623;11624;11625;11626;11627;11628;11629;11630 9322;9323;9324;9325;9326;9327;9328;9329;9330;9331;9332;9333;9334;9335;9336 9326 15 AEGDRVMVVLGPQTGR Oxidation (M) 1699.8676 0.86755262 3686 Q92917 GPKOW G patch domain and KOW motifs-containing protein yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 49.471 49.791 3 0.0003321 56025 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 55.864 36.541 87043000 0 0 0 0 0 14949000 15466000 0 0 0 23137000 20396000 13094000 0 0 1331 3686 1212 11631;11632;11633;11634;11635 9337;9338;9339;9340 9339 5241 4 AEGDSAGTAGTPGGTPAGDK Unmodified 1715.7598 0.75983589 3688 Q92925 SMARCD2 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.34 1 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 24.643 24.599 2 6.8111E-15 18602 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 119.39 109.95 146430000 20233000 9697300 0 8615600 6382400 10622000 9214400 8358400 6419800 12239000 7303400 12014000 10914000 7590200 16824000 1332 3688 1213 11636;11637;11638;11639;11640;11641;11642;11643;11644;11645;11646;11647;11648;11649;11650 9341;9342;9343;9344;9345;9346;9347;9348;9349;9350;9351;9352;9353;9354 9352 14 AEGDVAALNR Unmodified 1014.5094 0.50942227 1957 P67936 TPM4 Tropomyosin alpha-4 chain yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 27.507 27.814 2 0.0025706 28969 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.279 60.042 106650000 0 0 0 0 5479800 0 5075000 0 0 0 18432000 21365000 7902800 18490000 29904000 1333 1957 1214 11651;11652;11653;11654;11655;11656;11657;11658 9355;9356;9357;9358;9359 9355 5 AEGDVAALNRR Unmodified 1170.6105 0.6105333 1957 P67936 TPM4 Tropomyosin alpha-4 chain yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 2 1 2 1 2 2 1 2 1 1 1 2 22.676 22.885 2;3 3.5907E-09 24024 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 130.94 97.711 1294100000 0 0 0 56251000 42253000 52189000 39991000 60028000 35516000 67087000 153150000 210550000 100100000 167370000 309620000 1334 1957 1215 11659;11660;11661;11662;11663;11664;11665;11666;11667;11668;11669;11670;11671;11672;11673;11674;11675;11676 9360;9361;9362;9363;9364;9365;9366;9367;9368;9369;9370 9366 1 AEGERQPPPDSSEEAPPATQNFIIPK Acetyl (Protein N-term) 2846.3723 0.37226668 2509 Q15257 PPP2R4 Serine/threonine-protein phosphatase 2A activator yes yes 1 0 1 By MS/MS By MS/MS By MS/MS 4.25 3.34 2 1 1 1 2 1 79.579 75.556 3 5.248E-20 95929 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.551 73.874 229190000 12845000 207330000 0 0 0 0 0 0 0 0 0 0 0 9017900 0 1335 2509 1216 11677;11678;11679;11680 9371;9372;9373;9374;9375 9373 5 AEGFVDALHR Unmodified 1113.5567 0.55670682 3873 Q96I24 FUBP3 Far upstream element-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 48.662 49.082 2 0.0057966 55444 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 67.507 49.105 71446000 0 0 0 0 0 0 0 0 12416000 11444000 0 15010000 13491000 0 19085000 1336 3873 1217 11681;11682;11683;11684;11685;11686;11687;11688;11689 9376;9377;9378;9379;9380;9381;9382;9383;9384;9385 9379 10 AEGGAADLDTQR Acetyl (Protein N-term) 1244.5633 0.56330834 5198 Q9Y4E8 USP15 Ubiquitin carboxyl-terminal hydrolase 15 yes yes 1 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 38.431 38.47 2 7.1007E-06 41765 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 103.22 83.434 21380000 0 0 0 2223400 1874200 4706800 0 0 1757400 0 0 0 0 3564100 7253800 1337 5198 1218 11690;11691;11692;11693;11694;11695;11696;11697;11698 9386;9387;9388;9389;9390;9391;9392 9387 7 AEGGAADLDTQR Unmodified 1202.5527 0.55274365 5198 Q9Y4E8 USP15 Ubiquitin carboxyl-terminal hydrolase 15 yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 13.24 13.42 2 0.016142 12431 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 61.679 18.461 16766000 0 0 0 0 1509100 1415500 1383500 0 0 1894100 1987000 2460100 3191200 0 2925200 1338 5198 1218 11699;11700;11701;11702;11703;11704;11705;11706 9393 9393 0 AEGGAADLDTQRSDIATLLK Acetyl (Protein N-term) 2086.0542 0.054227 5198 Q9Y4E8 USP15 Ubiquitin carboxyl-terminal hydrolase 15 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 8.25 3.03 1 3 1 1 1 1 84.008 83.312 3 1.1552E-37 98850 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 102.33 93.726 91341000 0 69407000 0 0 0 0 0 0 0 10147000 5277900 6509300 0 0 0 1339 5198 1219 11707;11708;11709;11710 9394;9395;9396;9397 9395 4 AEGGAGEEHDLFAGLK Unmodified 1599.7529 0.75290002 34 A7E2V4 ZSWIM8 Zinc finger SWIM domain-containing protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 64.445 64.589 3 0.0030359 73895 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 42.813 31.758 73605000 0 0 0 2313000 0 7868000 3012900 5789900 6393700 4962900 6864200 11137000 7089400 5201500 12973000 1340 34 1220 11711;11712;11713;11714;11715;11716;11717;11718;11719;11720;11721 9398;9399;9400 9400 3 AEGGGGGGRPGAPAAGDGK Unmodified 1537.7233 0.72333123 2046 Q00839 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.7 2.91 4 1 25 2 3 2 2 2 2 2 2 2 2 2 2 3 2 8.7378 8.2583 2;3 3.6143E-108 5738 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 189.8 167.78 5377100000 41918000 180960000 0 257090000 220900000 248280000 186180000 183330000 315140000 341490000 1184400000 660320000 566430000 383280000 607320000 1341 2046 1221 11722;11723;11724;11725;11726;11727;11728;11729;11730;11731;11732;11733;11734;11735;11736;11737;11738;11739;11740;11741;11742;11743;11744;11745;11746;11747;11748;11749;11750;11751 9401;9402;9403;9404;9405;9406;9407;9408;9409;9410;9411;9412;9413;9414;9415;9416;9417;9418;9419;9420;9421;9422;9423;9424;9425;9426;9427 9416 16 AEGGGGGGRPGAPAAGDGKTEQK Unmodified 2023.9671 0.96714333 2046 Q00839 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 2 2 2 2 1 1 1 2 2 2 1 1 7.7359 7.8396 3;4 2.6779E-19 4632 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 86.625 77.693 278830000 0 0 0 13612000 14923000 3491800 14690000 5539800 2584700 10054000 107580000 61678000 25777000 8047200 10855000 1342 2046 1222 11752;11753;11754;11755;11756;11757;11758;11759;11760;11761;11762;11763;11764;11765;11766;11767;11768;11769;11770 9428;9429;9430;9431;9432;9433;9434 9432 7 AEGGQSAAAHSAHTVK Unmodified 1520.7332 0.73316763 3893 Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.84 3.46 6 3 23 2 5 2 2 1 2 2 2 2 2 2 2 2 2 2 6.5407 5.759 2;3;4 1.15E-23 4515 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 120.7 100.61 779990000 212850000 132390000 170630000 13010000 7085500 18302000 19175000 14599000 16280000 21020000 37867000 40857000 27640000 20554000 27726000 1343 3893 1223 11771;11772;11773;11774;11775;11776;11777;11778;11779;11780;11781;11782;11783;11784;11785;11786;11787;11788;11789;11790;11791;11792;11793;11794;11795;11796;11797;11798;11799;11800;11801;11802 9435;9436;9437;9438;9439;9440;9441;9442;9443;9444;9445;9446;9447;9448;9449;9450;9451;9452 9445 13 AEGGYFGQIR Unmodified 1096.5302 0.53015772 3465 Q8NI27 THOC2 THO complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.114 51.264 2 0.002754 57103 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 80.438 54.544 247480000 0 0 0 14491000 14140000 17670000 16155000 12685000 12223000 18073000 27980000 30022000 19988000 26463000 37590000 1344 3465 1224 11803;11804;11805;11806;11807;11808;11809;11810;11811;11812;11813;11814 9453;9454;9455;9456;9457;9458;9459;9460;9461;9462;9463;9464;9465;9466;9467;9468 9462 16 AEGHSDDESDSEGSDSESTSR Unmodified 2182.8007 0.80065067 4811 Q9P289 STK26 Serine/threonine-protein kinase 26 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 6.2811 6.4187 3 0.00039599 3720 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.164 43.164 17597000 0 0 0 1291600 0 2167000 1414700 0 0 1896100 2029900 3349600 1437300 1559700 2451400 1345 4811 1225 11815;11816;11817;11818;11819;11820;11821;11822;11823 9469;9470;9471 9471 3 AEGIARSADAGSFSPTPGQIGGAVK Unmodified 2343.1819 0.18188713 156 O00443 PIK3C2A Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha yes yes 0 0 1 By MS/MS 2 0 1 1 68.836 65.156 3 0.025837 80485 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 19.324 16.828 2701700 0 0 2701700 0 0 0 0 0 0 0 0 0 0 0 0 1346 156 1226 11824 9472;9473 9472 2 AEGILLLVK Unmodified 954.61137 0.61136815 4969 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82.876 82.008 2 0.0043999 94752 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 86.953 58.531 70086000 6204600 2466500 10261000 1563900 1695800 4595300 2784300 4079000 3374700 6682100 4994300 6008200 3301500 4301000 7773200 1347 4969 1227 11825;11826;11827;11828;11829;11830;11831;11832;11833;11834;11835;11836;11837;11838;11839 9474;9475;9476;9477;9478;9479;9480;9481;9482;9483;9484;9485;9486;9487;9488;9489 9482 16 AEGLQVGQDAR Unmodified 1142.568 0.56799978 3576 Q8WWM7 ATXN2L Ataxin-2-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.332 28.527 2 0.00042226 30369 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 98.943 66.102 101360000 0 0 0 5820900 5292100 5434400 6603700 5883500 5434900 8758400 12812000 9126200 9446800 8872700 17877000 1348 3576 1228 11840;11841;11842;11843;11844;11845;11846;11847;11848;11849;11850;11851 9490;9491;9492;9493;9494;9495;9496;9497;9498;9499;9500 9495 11 AEGPDVAVDLPK Unmodified 1209.6241 0.62411768 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 64.392 63.208 2 0.00035817 73281 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 94.297 72.79 637580000 5155500 113810000 0 30411000 28257000 29725000 39432000 45729000 30325000 38637000 35945000 61896000 63958000 49853000 64439000 1349 2172 1229 11852;11853;11854;11855;11856;11857;11858;11859;11860;11861;11862;11863;11864;11865;11866 9501;9502;9503;9504;9505;9506;9507;9508;9509;9510;9511;9512;9513;9514;9515 9514 14 AEGPEVDVNLPK Unmodified 1266.6456 0.6455814 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62.24 61.311 2 2.3636E-05 69940 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 102.06 84.593 3620500000 35015000 311050000 0 178530000 192390000 182010000 275410000 309800000 203110000 230110000 266500000 405310000 333950000 274550000 422710000 1350 2172 1230 11867;11868;11869;11870;11871;11872;11873;11874;11875;11876;11877;11878;11879;11880 9516;9517;9518;9519;9520;9521;9522;9523;9524;9525;9526;9527;9528;9529;9530;9531 9518 15 AEGPGLSR Unmodified 785.40317 0.40316629 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 2 14.306 14.467 2 0.005566 14001 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 106.36 46.715 531500000 0 0 0 51674000 0 62546000 48026000 44274000 37850000 92008000 130900000 0 59550000 0 4673900 1351 1124 1231 11881;11882;11883;11884;11885;11886;11887;11888;11889;11890 9532;9533;9534;9535;9536;9537;9538;9539;9540 9540 3 AEGPGLSRTGVELGK Unmodified 1469.7838 0.78380622 1124 P21333 FLNA Filamin-A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 2 2 2 51.692 45.921 2;3 0.0037479 56948 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 83.499 66.098 442740000 90289000 155550000 196900000 0 0 0 0 0 0 0 0 0 0 0 0 1352 1124 1232 11891;11892;11893;11894;11895;11896 9541;9542;9543;9544 9542 2 AEGPVAVVVNGHTEGPAPAR Unmodified 1926.9912 0.99117323 3149 Q86UK7 ZNF598 Zinc finger protein 598 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.124 56.249 3 3.7656E-53 63207 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 120.11 110.85 243400000 0 0 0 15486000 15023000 20656000 18396000 19196000 14469000 27478000 24558000 17776000 15541000 21768000 33056000 1353 3149 1233 11897;11898;11899;11900;11901;11902;11903;11904;11905;11906;11907;11908 9545;9546;9547;9548;9549;9550;9551;9552;9553;9554;9555;9556;9557;9558 9548 14 AEGSAVSDPQHAAR Acetyl (Protein N-term) 1436.6644 0.66441937 4362 Q9H2C0 GAN Gigaxonin yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.464 26.664 2 7.6988E-06 28338 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 87.184 68.404 38812000 0 0 0 4342000 2332100 3488700 2701000 2421100 1829300 2908500 3276800 5793700 2879900 2946700 3892000 1354 4362 1234 11909;11910;11911;11912;11913;11914;11915;11916;11917;11918;11919;11920 9559;9560;9561;9562;9563;9564;9565;9566;9567;9568;9569;9570 9564 12 AEGSDVANAVLDGADCIMLSGETAK Oxidation (M) 2509.1312 0.13123305 1000 P14618 PKM Pyruvate kinase PKM yes yes 0 1 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 2 1 2 83.948 84.051 2;3 9.041E-93 97009 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 138.96 130.96 139180000 0 0 0 0 13173000 9177500 5417300 0 0 7036700 7074000 28476000 0 10945000 57881000 1355 1000 1235 11921;11922;11923;11924;11925;11926;11927;11928;11929;11930 9571;9572;9573;9574 9573 1354 4 AEGSDVANAVLDGADCIMLSGETAK Unmodified 2493.1363 0.13631842 1000 P14618 PKM Pyruvate kinase PKM yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 92.27 91.573 3 2.5723E-10 106259 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.756 40.151 36134000 0 12497000 0 0 0 0 0 0 0 4081900 4871700 2093600 0 1017700 11572000 1356 1000 1235 11931;11932;11933;11934;11935;11936 9575;9576;9577;9578 9577 4 AEGSEAAELAEIYAK Unmodified 1550.7464 0.74641766 4653 Q9NUQ8 ABCF3 ATP-binding cassette sub-family F member 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 2 1 1 1 75.182 75.256 2 1.0782E-23 86840 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 149.38 125.53 361320000 0 0 0 14324000 21462000 30543000 23905000 28653000 19102000 36102000 39719000 39825000 26506000 27742000 53437000 1357 4653 1236 11937;11938;11939;11940;11941;11942;11943;11944;11945;11946;11947;11948;11949 9579;9580;9581;9582;9583;9584;9585;9586;9587;9588;9589;9590 9584 12 AEGSEIRLAK Unmodified 1072.5877 0.58767259 838 P07237 P4HB Protein disulfide-isomerase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 29.597 25.191 2 0.00058221 35111 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 121.64 29.738 1093300000 189380000 360680000 543260000 0 0 0 0 0 0 0 0 0 0 0 0 1358 838 1237 11950;11951;11952 9591;9592 9591 2 AEGSRPGGAAPVPEEGGR Unmodified 1692.818 0.81795989 905 P0DI83 RAB34 Ras-related protein Rab-34, isoform NARR yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 24.542 24.77 3 2.0621E-05 26180 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 68.243 26.147 163070000 0 0 0 11469000 17702000 0 21482000 0 13210000 14205000 15022000 21055000 15710000 15427000 17787000 1359 905 1238 11953;11954;11955;11956;11957;11958;11959;11960;11961;11962 9593;9594;9595;9596;9597;9598;9599;9600;9601;9602 9596 10 AEGSSNSVVHAETK Unmodified 1414.6688 0.66883604 4752 Q9NYV4 CDK12 Cyclin-dependent kinase 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.08 1 1 22 2 2 2 2 2 2 2 2 2 2 2 2 11.694 11.521 2;3 2.9181E-16 9651 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 119.45 100.21 408400000 0 116940000 0 16634000 16017000 21966000 20013000 18651000 18771000 31184000 0 36356000 39067000 32402000 40400000 1360 4752 1239 11963;11964;11965;11966;11967;11968;11969;11970;11971;11972;11973;11974;11975;11976;11977;11978;11979;11980;11981;11982;11983;11984;11985;11986 9603;9604;9605;9606;9607;9608;9609;9610;9611;9612;9613;9614;9615;9616;9617;9618;9619;9620;9621;9622 9609 16 AEGSSTASSGSQLAEGK Unmodified 1565.7169 0.71690845 4762 Q9NZB2 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 18.89 19.085 2 1.0979E-09 19666 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 108.59 104.35 110240000 0 0 0 6737100 5873500 10263000 6085000 6320300 5807700 12302000 8011200 13117000 13711000 7292900 14725000 1361 4762 1240 11987;11988;11989;11990;11991;11992;11993;11994;11995;11996;11997;11998;11999 9623;9624;9625;9626;9627;9628;9629;9630;9631;9632;9633;9634;9635;9636 9623 14 AEGTAEAPLENGGGGDSGAGALERGVAPIK Acetyl (Protein N-term) 2792.3577 0.35767924 3848 Q96G46 DUS3L tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like yes yes 1 0 1 By MS/MS 2.5 0.5 1 1 2 79.212 75.17 3 1.0565E-91 93330 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 132.78 125.9 124760000 0 124760000 0 0 0 0 0 0 0 0 0 0 0 0 0 1362 3848 1241 12000;12001 9637;9638 9637 2 AEGTAPLHIFPR Unmodified 1307.6986 0.69862003 580 O94761 RECQL4 ATP-dependent DNA helicase Q4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 64.132 64.336 3 0.0070906 73281 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 45.661 40.273 32153000 0 0 0 0 0 3432600 4608600 0 3254200 0 6042800 7562200 4696600 2555700 0 1363 580 1242 12002;12003;12004;12005;12006;12007;12008 9639;9640;9641;9642;9643 9643 5 AEGTTYRDELLTK Unmodified 1495.7518 0.75183739 193 O14617 AP3D1 AP-3 complex subunit delta-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.71 5 11 1 2 2 1 1 1 1 1 1 1 1 1 1 1 43.662 42.067 2;3 0.0018354 53313 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 76.522 66.723 470110000 14972000 98429000 88950000 14940000 12953000 22826000 14934000 25010000 16892000 31364000 31872000 47637000 24565000 24768000 0 1364 193 1243 12009;12010;12011;12012;12013;12014;12015;12016;12017;12018;12019;12020;12021;12022;12023;12024 9644;9645;9646;9647;9648 9646 2 AEGVIDGYADEK Unmodified 1265.5776 0.57756142 4077 Q99996 AKAP9 A-kinase anchor protein 9 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 40.601 39.917 2 3.3777E-05 49429 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.38 68.003 41616000 0 11718000 0 0 2662500 0 0 0 0 5510200 0 0 8036100 8409400 5280500 1365 4077 1244 12025;12026;12027;12028;12029;12030 9649;9650;9651;9652 9650 4 AEGYEVAHGGR Unmodified 1144.5261 0.52613497 1709 P53041 PPP5C Serine/threonine-protein phosphatase 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 2 2 1 2 2 13.98 13.166 2;3 0.011851 12119 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 34.695 29.801 187100000 5655200 38757000 38969000 0 2565000 0 0 0 0 0 15778000 18808000 6844500 13436000 46291000 1366 1709 1245 12031;12032;12033;12034;12035;12036;12037;12038;12039;12040;12041;12042;12043;12044 9653;9654;9655;9656;9657;9658;9659;9660 9656 4 AEGYEVAHGGRCVTVFSAPNYCDQMGNK Oxidation (M) 3132.3488 0.34878759 1709 P53041 PPP5C Serine/threonine-protein phosphatase 5 yes yes 0 1 1 By MS/MS 2 0 1 1 71.014 62.748 4 2.5896E-15 83615 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.905 72.926 12772000 12772000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1367 1709 1246 12045 9661 9661 2760 1 AEHASSLLELASTTK Unmodified 1556.8046 0.80460124 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68.98 67.459 3 0.00016587 84419 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 77.42 70.218 597940000 389020000 42474000 83826000 2400900 3736000 13225000 3796200 6182300 5001900 9265600 9885200 9833100 9386100 9911800 0 1368 2775 1247 12046;12047;12048;12049;12050;12051;12052;12053;12054;12055;12056;12057;12058;12059;12060;12061 9662;9663;9664;9665;9666;9667;9668;9669;9670;9671 9665 10 AEHDQLLLNYAK Unmodified 1413.7252 0.72522871 1111 P20700 LMNB1 Lamin-B1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58.802 57.658 3 0.0076074 65477 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 43.613 34.325 225160000 6282500 46550000 34348000 7031000 0 9672100 7009600 8972100 6123600 10009000 19323000 20575000 12342000 14572000 22348000 1369 1111 1248 12062;12063;12064;12065;12066;12067;12068;12069;12070;12071;12072;12073;12074;12075 9672;9673;9674;9675;9676 9675 3 AEHDSILAEK Unmodified 1111.551 0.55095274 1209 P26639 TARS Threonine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.94 3.85 1 4 2 11 3 3 1 1 1 1 1 1 1 1 1 1 1 1 28.763 27.644 2 2.1407E-23 22277 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 174.86 112.53 1980400000 259590000 1296900000 131980000 0 4412100 6518100 8883900 0 5031400 6944500 46912000 62636000 12152000 20652000 117820000 1370 1209 1249 12076;12077;12078;12079;12080;12081;12082;12083;12084;12085;12086;12087;12088;12089;12090;12091;12092;12093 9677;9678;9679;9680;9681;9682;9683;9684;9685;9686;9687;9688;9689;9690;9691;9692;9693;9694;9695;9696;9697;9698;9699;9700;9701;9702;9703;9704 9702 26 AEHLESPQLGGK Unmodified 1264.6412 0.64116473 4741 Q9NYD6 HOXC10 Homeobox protein Hox-C10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 30.379 30.685 3 0.0024753 32717 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 43.502 26.029 72334000 0 0 0 8471700 0 0 0 11257000 6850800 0 13091000 19850000 0 0 12813000 1371 4741 1250 12094;12095;12096;12097;12098;12099;12100;12101 9705;9706;9707;9708;9709;9710;9711;9712 9711 7 AEHMETNAVGPSPSSDTR Oxidation (M) 1900.8221 0.82211857 2990 Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 18.271 18.482 3 0.00067442 18108 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 42.913 33.383 8822000 0 0 0 0 0 0 1536400 0 2275800 1675500 0 3334200 0 0 0 1372 2990 1251 12102;12103;12104;12105 9713 9713 4606 1 AEHQVGEDGFLLK Unmodified 1441.7201 0.72014333 1669;1450 P42229;P51692 STAT5A;STAT5B Signal transducer and activator of transcription 5A;Signal transducer and activator of transcription 5B no no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 57.075 56.523 3 0.00071682 71924 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 60.345 50.117 37920000 0 0 12348000 0 0 11069000 0 0 2896400 4658500 0 0 0 0 6947700 1373 1450;1669 1252 12106;12107;12108;12109;12110 9714;9715;9716 9716 3 AEHVVVPIVAFNK Unmodified 1421.8031 0.8030851 2376 Q14149 MORC3 MORC family CW-type zinc finger protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching 6.12 3.89 3 1 4 1 2 1 1 1 1 1 78.758 76.51 3 0.00015403 98695 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.094 79.706 121190000 68652000 13426000 13168000 0 0 0 0 0 0 5701600 5657800 0 0 6006800 8579500 1374 2376 1253 12111;12112;12113;12114;12115;12116;12117;12118 9717;9718;9719;9720;9721 9719 5 AEIARSNASLTNNQNLIQSLK Unmodified 2284.2135 0.21352161 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 1 By MS/MS 2 0 1 1 77.875 69.744 3 5.3585E-92 91719 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 122.3 107.21 45582000 45582000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1375 965 1254 12119 9722;9723 9723 2 AEIDARNDSFTTCIELGK Unmodified 2038.963 0.96296915 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS 2 0 1 1 77.611 69.481 3 0.0020987 91459 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.461 42.108 22251000 22251000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1376 2047 1255 12120 9724 9724 1 AEIDGQNNVLVESHSGR Unmodified 1823.8762 0.87620305 2859 Q68DQ2 CRYBG3 Very large A-kinase anchor protein yes yes 0 0 0 By MS/MS 10 0 1 1 41.969 42.712 3 0.039166 46725 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.794 38.198 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1377 2859 1256 12121 9725 9725 1 AEIDMLDIR Oxidation (M) 1090.5329 0.53285983 887 P09525 ANXA4 Annexin A4 yes yes 0 1 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 59.044 59.12 2 0.026756 67495 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 44.349 27.573 10790000 0 0 0 0 3421400 0 0 0 0 0 0 4158600 3209800 0 0 1378 887 1257 12122;12123;12124 9726 9726 1 AEIEALAALK Unmodified 1027.5914 0.59136099 378 O43896 KIF1C Kinesin-like protein KIF1C yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 73.912 73.983 2 0.016439 85311 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 49.536 33.894 7284200 0 0 0 0 0 4732500 2551700 0 0 0 0 0 0 0 0 1379 378 1258 12125;12126 9727;9728 9727 2 AEIITVSDGR Unmodified 1059.556 0.55603812 4108 Q9BRG1 VPS25 Vacuolar protein-sorting-associated protein 25 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.848 43.022 2 0.002011 47735 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 98.033 65.193 309820000 0 0 0 18567000 16741000 25054000 22621000 19714000 18270000 27571000 34234000 30454000 32331000 24468000 39791000 1380 4108 1259 12127;12128;12129;12130;12131;12132;12133;12134;12135;12136;12137;12138 9729;9730;9731;9732;9733;9734;9735;9736;9737;9738;9739;9740;9741;9742;9743 9735 13 AEIITVSDGRGVK Unmodified 1343.7409 0.74087877 4108 Q9BRG1 VPS25 Vacuolar protein-sorting-associated protein 25 yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 46.145 41.809 3 0.00015958 52331 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 103.75 89.494 107440000 0 49878000 57558000 0 0 0 0 0 0 0 0 0 0 0 0 1381 4108 1260 12139;12140 9744;9745;9746;9747 9746 3 AEILALQQALK Unmodified 1196.7129 0.71287311 189 O14578 CIT Citron Rho-interacting kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 80.119 79.255 2 0.00094965 99179 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.143 68.053 60781000 0 34486000 1824600 0 2612900 3996300 0 3155000 0 5963400 0 0 3786000 0 4957200 1382 189 1261 12141;12142;12143;12144;12145;12146;12147;12148;12149 9748;9749;9750;9751;9752;9753;9754;9755;9756 9750 9 AEILGEAAEK Unmodified 1029.5342 0.53424004 3497 Q8TD26 CHD6 Chromodomain-helicase-DNA-binding protein 6 yes yes 0 0 0 By MS/MS 2 0 1 1 39.068 34.057 2 0.024536 44522 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.504 15.445 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1383 3497 1262 12150 9757 9757 1 AEILSLESRK Unmodified 1144.6452 0.64518747 3414 Q8ND24 RNF214 RING finger protein 214 yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 43.184 43.361 3 0.0040438 47758 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 51.762 34.849 165290000 0 0 0 12911000 6762500 13522000 10128000 16266000 0 13400000 15887000 18187000 15812000 11615000 30802000 1384 3414 1263 12151;12152;12153;12154;12155;12156;12157;12158;12159;12160;12161 9758;9759;9760 9760 3 AEIMESIK Unmodified 919.46847 0.46846866 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 47.148 41.937 2 0.014574 54605 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.531 28.499 212040000 0 212040000 0 0 0 0 0 0 0 0 0 0 0 0 0 1385 2431 1264 12162;12163 9761 9761 1 AEIPCEDEQEQEHNGPLDNK Unmodified 2350.9972 0.99718241 3987 Q96SB4 SRPK1 SRSF protein kinase 1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 41.735 42.041 3 0.00056422 45998 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.089 42.662 26597000 0 0 0 0 0 5610100 0 0 0 7523700 0 0 0 3952800 9510100 1386 3987 1265 12164;12165;12166;12167 9762;9763;9764 9762 3 AEIPLNEQTTLSK Unmodified 1442.7617 0.76167379 3037 Q76L83 ASXL2 Putative Polycomb group protein ASXL2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 57.738 56.912 2 0.0027378 64547 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.203 46.106 68886000 0 13426000 0 5926300 0 0 0 0 0 0 0 16269000 12555000 9692400 11018000 1387 3037 1266 12168;12169;12170;12171;12172;12173 9765;9766;9767;9768;9769;9770 9769 6 AEIQELAMVPR Unmodified 1255.6595 0.65945733 1179 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 74.276 74.259 2 0.0044032 85108 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.56 38.872 9507300 0 0 0 0 2372600 1839900 0 0 0 0 0 0 0 0 5294900 1388 1179 1267 12174;12175;12176 9771 9771 1 AEIQELAMVPR Oxidation (M) 1271.6544 0.65437195 1179 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 65.238 65.319 2 0.0076117 74816 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 48.423 25.352 49607000 0 0 0 4228500 0 0 0 6813400 8151800 0 0 0 0 12243000 18171000 1389 1179 1267 12177;12178;12179;12180;12181 9772;9773 9772 1707 2 AEIQNLLDK Unmodified 1042.5659 0.56587452 3082 Q7Z3E2 CCDC186 Coiled-coil domain-containing protein 186 yes yes 0 0 0 By MS/MS 2 0 1 1 67.185 61.269 2 0.048877 78353 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.37 49.117 29128000 0 29128000 0 0 0 0 0 0 0 0 0 0 0 0 0 1390 3082 1268 12182 9774 9774 0 AEIRYEGILYTIDTENSTVALAK Unmodified 2569.3275 0.32754831 3415 Q8ND56 LSM14A Protein LSM14 homolog A yes yes 0 0 1 By MS/MS 2 0 1 1 92.623 84.492 3 8.8901E-16 109429 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.807 68.91 23122000 23122000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1391 3415 1269 12183 9775 9775 1 AEISCIDNK Unmodified 1048.4859 0.48590964 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 28.412 23.5 2 0.037413 33007 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.338 41.037 261880000 18710000 243170000 0 0 0 0 0 0 0 0 0 0 0 0 0 1392 487 1270 12184;12185 9776 9776 1 AEISCTDNQDGTCSVSYLPVLPGDYSILVK Unmodified 3300.553 0.55300951 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 97.162 93.653 3 3.1014E-104 115150 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.37 135.96 625780000 0 620880000 4906800 0 0 0 0 0 0 0 0 0 0 0 0 1393 1124 1271 12186;12187;12188 9777;9778;9779 9777 3 AEISDLDRQIEQLR Acetyl (Protein N-term) 1726.885 0.88497683 1811 P60510 PPP4C Serine/threonine-protein phosphatase 4 catalytic subunit yes yes 1 0 1 By MS/MS 10 0 1 1 87.208 87.366 2 0.0044924 101043 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.973 23.439 4218800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4218800 1394 1811 1272 12189 9780 9780 1 AEISFEDRK Unmodified 1093.5404 0.54038805 1124 P21333 FLNA Filamin-A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 30.545 29.501 2 1.9689E-19 31136 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 175.38 114.62 852510000 61899000 166560000 164860000 20513000 9788000 31749000 16358000 18077000 25283000 42073000 42546000 59006000 58428000 33632000 101730000 1395 1124 1273 12190;12191;12192;12193;12194;12195;12196;12197;12198;12199;12200;12201;12202;12203;12204;12205 9781;9782;9783;9784;9785;9786;9787;9788;9789;9790;9791;9792;9793;9794 9793 11 AEISGVQGSETQVLR Unmodified 1572.8107 0.81074925 3321 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 54.189 54.326 2 3.925E-14 61387 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 124.42 80.105 58774000 0 0 0 3480600 3352900 5651000 4906500 4424400 3054000 5703700 5248600 8177300 3601400 5167300 6006400 1396 3321 1274 12206;12207;12208;12209;12210;12211;12212;12213;12214;12215;12216;12217 9795;9796;9797;9798;9799;9800;9801;9802;9803;9804;9805;9806 9796 12 AEITDAEGLGLK Unmodified 1215.6347 0.63468237 2391 Q14203 DCTN1 Dynactin subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.091 61.193 2 0.0013438 69723 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 68.657 36.723 92820000 0 0 0 4798400 4446100 8820600 4985200 8265600 3243000 9295300 9559600 11245000 6444400 8008300 13708000 1397 2391 1275 12218;12219;12220;12221;12222;12223;12224;12225;12226;12227;12228;12229 9807;9808;9809;9810;9811;9812;9813;9814;9815;9816;9817;9818 9808 12 AEITFDDHK Unmodified 1074.4982 0.49818889 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 2 1 1 1 2 1 1 1 1 29.694 29.946 2 0.0030604 32068 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 91.853 55.973 72743000 0 0 0 16855000 0 3560400 0 0 0 3703900 17221000 8643900 3849500 5928400 12980000 1398 487 1276 12230;12231;12232;12233;12234;12235;12236;12237;12238;12239;12240 9819;9820;9821;9822;9823;9824;9825;9826;9827 9823 9 AEITLLVQGQELPEFWEALGGEPSEIK Unmodified 2982.5226 0.52261931 2228 Q13045 FLII Protein flightless-1 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 100.98 92.846 3 2.461E-21 119607 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.342 70.925 23423000 23423000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1399 2228 1277 12241 9828;9829 9829 2 AEITLVATKPEK Unmodified 1298.7446 0.74456717 4839 Q9UBF2 COPG2 Coatomer subunit gamma-2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 3.8 3.12 3 1 1 1 2 1 1 49.548 45.037 3 0.010794 49618 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 32.567 12.331 69726000 17605000 39904000 5274400 0 0 6942500 0 0 0 0 0 0 0 0 0 1400 4839 1278 12242;12243;12244;12245;12246 9830;9831;9832 9830 3 AEIVHGDLSPR Unmodified 1192.62 0.62003536 413 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 33.947 34.185 3 0.0036353 36361 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.423 31.155 92574000 0 0 0 0 6221400 7480400 6461800 8636400 5251900 8828800 12065000 9887000 7320600 8325000 12095000 1401 413 1279 12247;12248;12249;12250;12251;12252;12253;12254;12255;12256;12257 9833;9834 9834 2 AEKPDATADAEPDANQK Unmodified 1769.8068 0.80678609 3999 Q96T58 SPEN Msx2-interacting protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 15.48 15.616 3 4.8847E-25 15191 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 106.82 95.541 58128000 0 0 0 3400900 3659200 3933800 5246600 0 3564800 3469100 0 8829500 8149900 8572000 9302200 1402 3999 1280 12258;12259;12260;12261;12262;12263;12264;12265;12266;12267 9835;9836;9837;9838 9838 4 AEKPPLSASSPQQRPPEPETGESAGTSR Unmodified 2890.4057 0.40569207 5172 Q9Y3Q8 TSC22D4 TSC22 domain family protein 4 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 39.892 40.232 4 6.3353E-14 44227 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 51.586 45.682 83858000 0 0 0 0 0 8256100 12054000 0 0 12527000 0 20842000 0 9998600 20181000 1403 5172 1281 12268;12269;12270;12271;12272;12273 9839;9840;9841;9842 9842 4 AELAELEQLIK Unmodified 1255.7024 0.702368 3507 Q8TDR0 TRAF3IP1 TRAF3-interacting protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 94.14 89.244 2 0.0047468 110765 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.939 47.179 13343000 0 13343000 0 0 0 0 0 0 0 0 0 0 0 0 0 1404 3507 1282 12274 9843 9843 1 AELAELPLR Unmodified 1010.576 0.57604528 3961 Q96QK1 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.883 69.96 2 0.0030065 79419 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.516 49.407 222780000 0 0 0 8599400 8353000 11156000 9927100 12958000 7730200 15022000 30494000 27148000 10728000 21255000 59408000 1405 3961 1283 12275;12276;12277;12278;12279;12280;12281;12282;12283;12284;12285;12286 9844;9845;9846;9847;9848;9849;9850;9851;9852;9853;9854 9847 11 AELANIERECLNNK Unmodified 1672.8203 0.82026808 4365 Q9H2G2 SLK STE20-like serine/threonine-protein kinase yes yes 0 0 1 By MS/MS By MS/MS 2.2 0.4 4 1 3 2 54.663 49.796 2;3 2.982E-38 64670 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 194.96 156.39 148170000 0 49384000 98788000 0 0 0 0 0 0 0 0 0 0 0 0 1406 4365 1284 12287;12288;12289;12290;12291 9855;9856;9857;9858;9859 9855 4 AELANSTEVLESFK Unmodified 1536.7672 0.7671531 4679 Q9NVR2 INTS10 Integrator complex subunit 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 78.452 78.542 2 0.00013407 89931 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 102.4 85.768 25048000 0 0 0 0 3422800 0 1962400 4672500 2567500 0 3588600 0 4031100 4802600 0 1407 4679 1285 12292;12293;12294;12295;12296;12297;12298;12299 9860;9861;9862;9863;9864;9865;9866;9867 9864 8 AELAPPAPPLPPLPPER Unmodified 1760.9825 0.98250603 198 O14641 DVL2 Segment polarity protein dishevelled homolog DVL-2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 85.867 85.938 2 0.00021277 99462 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 72.958 58.082 33542000 0 0 0 1077600 0 2436600 3104600 0 0 4649000 3935900 4834700 2949600 3816900 6737000 1408 198 1286 12300;12301;12302;12303;12304;12305;12306;12307;12308 9868;9869;9870;9871;9872;9873;9874 9869 7 AELCPLAEELSCSICLEPFK Acetyl (Protein N-term) 2407.111 0.1109553 2401 Q14258 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes yes 1 0 0 By MS/MS 2 0 2 2 102.27 97.554 2;3 7.4543E-139 120569 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 207.72 193.12 160170000 0 160170000 0 0 0 0 0 0 0 0 0 0 0 0 0 1409 2401 1287 12309;12310 9875;9876;9877;9878 9876 4 AELDAEHAQK Unmodified 1110.5306 0.53055165 3824 Q96EV8 DTNBP1 Dysbindin yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 12.201 8.8665 2 4.0338E-05 11973 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.74 95.405 35963000 0 35963000 0 0 0 0 0 0 0 0 0 0 0 0 0 1410 3824 1288 12311;12312 9879;9880 9879 2 AELDDTPMR Oxidation (M) 1062.4652 0.4651742 1151 P23246 SFPQ Splicing factor, proline- and glutamine-rich yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 20.467 20.633 2 0.004693 21408 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 73.26 52.635 91566000 0 0 0 0 9066200 13438000 16532000 0 0 15870000 22081000 0 0 0 14579000 1411 1151 1289 12313;12314;12315;12316;12317;12318 9881;9882;9883;9884;9885 9882 1649 5 AELDDTPMR Unmodified 1046.4703 0.47025958 1151 P23246 SFPQ Splicing factor, proline- and glutamine-rich yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.215 34.398 2 0.010476 37692 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 64.265 53.839 179680000 0 0 0 10259000 8226700 14778000 15291000 9000900 7583500 14977000 19217000 27159000 9584100 12570000 31036000 1412 1151 1289 12319;12320;12321;12322;12323;12324;12325;12326;12327;12328;12329;12330 9886;9887;9888;9889;9890;9891;9892;9893;9894 9887 9 AELDGTILK Unmodified 958.53351 0.53351176 3589 Q8WXF1 PSPC1 Paraspeckle component 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 3 1 1 1 1 1 1 1 1 1 1 54.076 52.662 2 0.0051115 60090 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 83.265 33.615 759220000 0 508470000 5941200 12452000 0 0 16482000 15949000 21391000 27875000 36896000 33352000 23787000 0 56627000 1413 3589 1290 12331;12332;12333;12334;12335;12336;12337;12338;12339;12340;12341;12342;12343 9895;9896;9897;9898;9899;9900;9901;9902;9903;9904;9905 9895 9 AELDLMAPGPLPR Acetyl (Protein N-term) 1420.7384 0.73843593 646 O95361 TRIM16 Tripartite motif-containing protein 16 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 93.125 92.629 2 8.1638E-05 112351 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.68 102.17 66811000 0 52616000 0 0 0 1363300 0 1367600 0 1584100 2338300 1660800 0 1632200 4248900 1414 646 1291 12344;12345;12346;12347;12348;12349;12350;12351 9906;9907;9908;9909;9910;9911;9912;9913 9908 8 AELDLMAPGPLPR Acetyl (Protein N-term);Oxidation (M) 1436.7334 0.73335055 646 O95361 TRIM16 Tripartite motif-containing protein 16 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 88.878 84.005 2 0.00075113 104420 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.533 65.926 24903000 0 24903000 0 0 0 0 0 0 0 0 0 0 0 0 0 1415 646 1291 12352;12353;12354 9914;9915;9916;9917 9915 788 4 AELDNELMEGK Unmodified 1247.5704 0.57036755 2308 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 51.935 52.181 2 0.0019204 58003 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 70.1 53.33 32002000 0 0 0 0 0 4616200 0 3688800 5127800 5309800 0 8906800 0 4352100 0 1416 2308 1292 12355;12356;12357;12358;12359;12360;12361;12362 9918;9919;9920;9921;9922;9923;9924 9922 7 AELDQLLSGFGLEDPGSSLK Unmodified 2075.0423 0.04226533 2854 Q68CZ2 TNS3 Tensin-3 yes yes 0 0 0 By MS/MS 2 0 1 1 98.956 94.222 2 2.3814E-138 116541 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 209.11 170.84 34658000 0 34658000 0 0 0 0 0 0 0 0 0 0 0 0 0 1417 2854 1293 12363 9925;9926 9926 2 AELDQLPDESSSAK Acetyl (Protein N-term) 1530.7049 0.70494678 2801 Q5TKA1 LIN9 Protein lin-9 homolog yes yes 1 0 0 By MS/MS By MS/MS 1 0 2 1 1 102.24 105.32 2 0.00033259 94232 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 101.93 85.675 4378300 1965300 2413000 0 0 0 0 0 0 0 0 0 0 0 0 0 1418 2801 1294 12364;12365 9927;9928 9928 2 AELEDLR Unmodified 844.42905 0.42904669 2816 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.968 35.149 2 0.023899 38703 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 94.262 7.3957 196640000 0 0 0 11624000 10621000 14566000 11230000 14684000 9169300 22844000 19012000 18910000 20451000 16663000 26863000 1419 2816 1295 12366;12367;12368;12369;12370;12371;12372;12373;12374;12375;12376;12377 9929;9930;9931;9932;9933;9934;9935 9934 7 AELEIANPPELQK Unmodified 1450.7668 0.76675917 5193 Q9Y4C1 KDM3A Lysine-specific demethylase 3A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 69.663 69.338 2 0.0024736 79390 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 69.979 67.943 193310000 0 35233000 0 9028800 12165000 12421000 12707000 12308000 8729200 12077000 16811000 17702000 12041000 13106000 18985000 1420 5193 1296 12378;12379;12380;12381;12382;12383;12384;12385;12386;12387;12388;12389;12390 9936;9937;9938;9939;9940;9941;9942;9943;9944 9944 8 AELEIQK Unmodified 829.45453 0.45453316 847 P07741 APRT Adenine phosphoribosyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 31.517 27.034 2 0.021131 34713 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 110.61 31.158 1651300000 77102000 1564300000 9954300 0 0 0 0 0 0 0 0 0 0 0 0 1421 847 1297 12391;12392;12393;12394 9945;9946;9947;9948 9948 4 AELEQHLEQEQEFQVNK Unmodified 2097.9967 0.99671212 2598 Q16204 CCDC6 Coiled-coil domain-containing protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.12 3.79 4 1 3 1 3 1 1 1 1 61.707 58.244 2;3 1.5201E-86 75027 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 216.46 194.59 221480000 16022000 144230000 17769000 0 0 0 0 6499000 7247600 0 0 0 0 0 29712000 1422 2598 1298 12395;12396;12397;12398;12399;12400;12401;12402 9949;9950;9951;9952;9953;9954;9955 9950 5 AELERLNK Unmodified 971.53999 0.53999412 1356 P35579 MYH9 Myosin-9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 18.416 17.581 2 0.0082356 24250 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 166.68 89.396 813580000 175250000 205480000 331750000 6586300 6437600 4509100 8821900 6436000 9013300 8362600 9658600 15037000 8804700 6258600 11175000 1423 1356 1299 12403;12404;12405;12406;12407;12408;12409;12410;12411;12412;12413;12414;12415;12416;12417;12418 9956;9957;9958;9959;9960;9961;9962;9963 9957 3 AELFQQEQQSADK Unmodified 1520.7107 0.71070086 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 39.656 39.101 2 2.8765E-75 43999 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 194.5 169.73 228910000 0 34706000 0 9327700 8410400 18255000 11852000 12033000 16230000 15420000 16912000 22404000 20013000 18326000 25020000 1424 4139 1300 12419;12420;12421;12422;12423;12424;12425;12426;12427;12428;12429;12430;12431;12432 9964;9965;9966;9967;9968;9969;9970;9971;9972 9964 9 AELFTQSCADLDK Unmodified 1496.6817 0.68170891 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 61.321 59.766 2 3.0838E-25 75544 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 157.38 134.02 635820000 17386000 477910000 3111300 4871600 6541900 13418000 7064200 0 0 13416000 19173000 15185000 14182000 17147000 26419000 1425 2047 1301 12433;12434;12435;12436;12437;12438;12439;12440;12441;12442;12443;12444;12445;12446 9973;9974;9975;9976;9977;9978;9979;9980;9981;9982;9983 9975 9 AELGAGAPPAVVAR Unmodified 1277.7092 0.70918471 2667 Q3KQU3 MAP7D1 MAP7 domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 53.782 54.013 2 0.010256 62047 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 54.539 41.186 10668000 0 0 0 0 0 0 0 0 0 0 0 0 6167500 4500100 0 1426 2667 1302 12447;12448;12449;12450;12451 9984;9985;9986;9987 9987 4 AELGAGGDGHR Acetyl (Protein N-term) 1080.4948 0.49483484 2398 Q14244 MAP7 Ensconsin yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 22.558 22.783 2 0.00016625 23713 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 82.749 65.786 124820000 0 0 0 8229700 7855000 0 11115000 7699700 9474700 2983100 15477000 22260000 12138000 12324000 15267000 1427 2398 1303 12452;12453;12454;12455;12456;12457;12458;12459;12460;12461;12462 9988;9989;9990;9991;9992;9993;9994;9995 9993 8 AELGAGGDGHRGGDGAVR Acetyl (Protein N-term) 1692.7928 0.79280778 2398 Q14244 MAP7 Ensconsin yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 28.131 28.418 3 4.3494E-16 29641 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 97.579 81.397 262120000 0 0 0 0 22175000 23348000 0 22610000 0 0 45891000 43927000 30713000 30300000 43154000 1428 2398 1304 12463;12464;12465;12466;12467;12468;12469;12470 9996;9997;9998;9999;10000;10001;10002;10003 9997 8 AELGAGGDGHRGGDGAVRSETAPDSYK Acetyl (Protein N-term) 2671.2222 0.22224839 2398 Q14244 MAP7 Ensconsin yes yes 1 0 2 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 2 1 1 1 2 2 2 2 40.556 40.925 3;4 6.7614E-36 45034 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 87.102 68.7 201820000 0 0 0 0 0 4682500 18814000 15153000 3241900 0 20383000 38359000 30262000 24743000 46180000 1429 2398 1305 12471;12472;12473;12474;12475;12476;12477;12478;12479;12480;12481;12482;12483;12484 10004;10005;10006;10007;10008;10009;10010;10011;10012;10013;10014;10015 10015 12 AELGALPDDFIDSLEK Unmodified 1731.8567 0.85669639 4252 Q9BYT8 NLN Neurolysin, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 96.447 91.785 2 2.7432E-38 114473 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 159.64 143.38 335180000 77119000 250710000 7350400 0 0 0 0 0 0 0 0 0 0 0 0 1430 4252 1306 12485;12486;12487;12488 10016;10017;10018 10016 3 AELGEADEAELQRLVAAEQQK Acetyl (Protein N-term) 2339.1605 0.16048299 5234 Q9Y5J9 TIMM8B Mitochondrial import inner membrane translocase subunit Tim8 B yes yes 1 0 1 By MS/MS By MS/MS 2.25 0.433 3 1 3 1 93.441 89.565 2;3 1.0136E-24 110971 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.58 97.061 147510000 0 144740000 2769300 0 0 0 0 0 0 0 0 0 0 0 0 1431 5234 1307 12489;12490;12491;12492 10019;10020 10019 2 AELGELK Acetyl (Protein N-term) 800.42798 0.42798405 5297 Q9Y6X2 PIAS3 E3 SUMO-protein ligase PIAS3 yes yes 1 0 0 By MS/MS By matching 2 0 2 1 1 24.773 21.191 2 0.030211 28113 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 54.765 10.234 92544000 0 90619000 1925100 0 0 0 0 0 0 0 0 0 0 0 0 1432 5297 1308 12493;12494 10021 10021 1 AELGIPLEEVPPEEINYLTR Unmodified 2281.1842 0.18417854 2356 Q13907 IDI1 Isopentenyl-diphosphate Delta-isomerase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 96.429 91.761 3 8.3705E-07 114336 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.49 65.299 241300000 13023000 224840000 3437200 0 0 0 0 0 0 0 0 0 0 0 0 1433 2356 1309 12495;12496;12497;12498 10022;10023;10024;10025 10022 4 AELGIPLEEVPPEEINYLTRIHYK Unmodified 2822.4854 0.48544594 2356 Q13907 IDI1 Isopentenyl-diphosphate Delta-isomerase 1 yes yes 0 0 1 By MS/MS 2 0 1 1 96.773 88.643 4 9.2644E-24 114507 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 100.19 96.673 40086000 40086000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1434 2356 1310 12499 10026 10026 1 AELGMGDSTSQSPPIK Unmodified 1616.7716 0.77158655 4586 Q9NR19 ACSS2 Acetyl-coenzyme A synthetase, cytoplasmic yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 51.965 52.321 2 0.0033996 57976 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.829 29.289 10584000 0 0 0 0 0 0 0 1493400 0 0 0 0 0 1798400 7292200 1435 4586 1311 12500;12501;12502 10027 10027 1 AELGPRLK Unmodified 882.5287 0.52870115 4003 Q96TA1 FAM129B Niban-like protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 30.593 26.094 2 0.037995 36488 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 127.12 66.33 222190000 206120000 0 16064000 0 0 0 0 0 0 0 0 0 0 0 0 1436 4003 1312 12503;12504 10028 10028 0 AELGTDLLSQLSLEDQK Unmodified 1858.9524 0.95238769 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 0 0 By MS/MS By MS/MS 2.4 0.49 3 2 4 1 93.016 89.272 2;3 4.0112E-182 110897 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 288.51 268.38 688530000 0 684950000 3579400 0 0 0 0 0 0 0 0 0 0 0 0 1437 5071 1313 12505;12506;12507;12508;12509 10029;10030;10031;10032;10033 10030 3 AELHVLDVK Unmodified 1022.576 0.57604528 1517 P46939 UTRN Utrophin yes yes 0 0 0 By MS/MS 2 0 1 1 54.874 50.977 2 0.047095 63782 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 58.596 30.422 4154600 0 0 4154600 0 0 0 0 0 0 0 0 0 0 0 0 1438 1517 1314 12510 10034 10034 1 AELIVQPELK Unmodified 1138.6598 0.6597749 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.427 67.509 2 0.0060966 76398 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.299 54.663 1528200000 0 0 0 359690000 78351000 88851000 78309000 312680000 51627000 88484000 98518000 125230000 125950000 54299000 66222000 1439 1029 1315 12511;12512;12513;12514;12515;12516;12517;12518;12519;12520;12521;12522 10035;10036;10037;10038;10039;10040;10041;10042;10043;10044;10045;10046 10038 8 AELLDNEK Unmodified 930.46583 0.46582612 4497 Q9HB71 CACYBP Calcyclin-binding protein yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 27.671 22.782 2 0.0024727 29227 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.69 56.697 7986300000 874810000 7111500000 0 0 0 0 0 0 0 0 0 0 0 0 0 1440 4497 1316 12523;12524 10047;10048 10048 2 AELLEAFK Unmodified 919.50148 0.50148335 3713 Q969F9 HPS3 Hermansky-Pudlak syndrome 3 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 70.024 69.677 2 0.014055 89391 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.492 43.855 142130000 0 62910000 0 5220600 4824200 7419000 5837300 6055800 5404800 7678600 0 9852200 7885100 9451000 9590900 1441 3713 1317 12525;12526;12527;12528;12529;12530;12531;12532;12533;12534;12535;12536 10049;10050;10051;10052 10050 3 AELLLLK Unmodified 798.52149 0.52149051 3538 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72.889 72.172 2 0.032282 83160 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 73.039 0 301130000 13541000 0 17170000 18945000 21574000 26552000 21298000 18177000 17014000 25855000 23257000 25425000 21087000 19653000 31579000 1442 3538 1318 12537;12538;12539;12540;12541;12542;12543;12544;12545;12546;12547;12548;12549;12550 10053;10054;10055;10056;10057;10058 10056 6 AELMEISEDK Oxidation (M) 1179.5329 0.53291941 811 P05455 SSB Lupus La protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.59 1 6 1 21 2 5 1 1 1 1 2 2 2 2 2 2 2 2 2 34.667 33.691 2 0.001957 37408 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 78.264 61.488 935050000 49371000 636250000 3637300 6993900 6424700 6145500 14962000 16649000 14473000 21303000 44374000 22428000 28095000 21364000 42576000 1443 811 1319 12551;12552;12553;12554;12555;12556;12557;12558;12559;12560;12561;12562;12563;12564;12565;12566;12567;12568;12569;12570;12571;12572;12573;12574;12575;12576;12577;12578;12579 10059;10060;10061;10062;10063;10064;10065;10066;10067;10068;10069;10070;10071;10072;10073;10074;10075;10076;10077;10078;10079;10080;10081;10082;10083;10084;10085;10086;10087 10073 970 29 AELMEISEDK Unmodified 1163.538 0.53800479 811 P05455 SSB Lupus La protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 50.882 49.574 2 2.1105E-06 63718 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 149.94 134.79 1670700000 92822000 1211900000 10216000 12488000 14529000 17886000 15743000 16579000 14411000 21529000 40296000 41696000 28877000 32287000 99413000 1444 811 1319 12580;12581;12582;12583;12584;12585;12586;12587;12588;12589;12590;12591;12592;12593;12594;12595 10088;10089;10090;10091;10092;10093;10094;10095;10096;10097;10098;10099;10100;10101;10102;10103;10104;10105 10092 17 AELMLNDQK Oxidation (M) 1076.5172 0.51720977 5304 yes yes 0 1 0 By MS/MS 10 0 2 2 37.557 38.293 2 0.012363 41265 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.549 27.246 + 37056000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37056000 1445 5304 1320 12596;12597 10106 10106 6709 1 AELNEFLTR Unmodified 1091.5611 0.56112349 1156 P23396 RPS3 40S ribosomal protein S3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.096 67.18 2 0.00014505 76122 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 149.94 99.233 1557200000 0 0 0 67700000 76583000 78515000 70181000 81763000 60966000 117850000 163800000 213150000 171090000 160120000 295490000 1446 1156 1321 12598;12599;12600;12601;12602;12603;12604;12605;12606;12607;12608;12609 10107;10108;10109;10110;10111;10112;10113;10114;10115;10116;10117;10118;10119 10110 13 AELNNEK Unmodified 816.39775 0.39774656 1937 P63010 AP2B1 AP-2 complex subunit beta yes yes 0 0 0 By MS/MS 2 0 1 1 5.5587 2.1812 2 0.02978 4996 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.262 31.545 16996000 16996000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1447 1937 1322 12610 10120 10120 1 AELNPWPEYIYTR Unmodified 1650.8042 0.80420731 1209 P26639 TARS Threonine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS 10 0 1 1 84.172 84.351 2 1.8248E-05 97420 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.39 101.66 10070000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10070000 1448 1209 1323 12611 10121;10122 10122 2 AELNSTTEELHK Unmodified 1370.6678 0.66777341 631 O95235 KIF20A Kinesin-like protein KIF20A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 6.25 3.77 1 1 2 2 1 1 29.896 27.494 3 0.0065609 35947 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 41.242 26.211 42516000 0 27282000 0 8158600 7075000 0 0 0 0 0 0 0 0 0 0 1449 631 1324 12612;12613;12614;12615 10123;10124;10125 10123 3 AELPGQPEMK Unmodified 1098.5379 0.53794521 3657 Q92766 RREB1 Ras-responsive element-binding protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 40.762 40.923 2 0.018376 45611 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 48.423 6.5838 22045000 0 0 0 0 0 0 0 0 0 22045000 0 0 0 0 0 1450 3657 1325 12616 10126 10126 1 AELPGQPEMK Oxidation (M) 1114.5329 0.53285983 3657 Q92766 RREB1 Ras-responsive element-binding protein 1 yes yes 0 1 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 27.161 27.313 2 0.01168 29197 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 48.794 38.102 74072000 0 0 0 6325700 6179000 10239000 7010300 5414100 7044800 7950200 5975800 0 7913500 4695400 5324600 1451 3657 1325 12617;12618;12619;12620;12621;12622;12623;12624;12625;12626;12627 10127 10127 5174 1 AELPPGPGAVGREMTK Unmodified 1608.8294 0.8293762 4916 Q9UI10 EIF2B4 Translation initiation factor eIF-2B subunit delta yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 59.839 53.798 3 0.013602 67222 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 49.049 43.954 16456000 7718300 0 8737500 0 0 0 0 0 0 0 0 0 0 0 0 1452 4916 1326 12628;12629 10128 10128 0 AELQAQLAALSTK Unmodified 1342.7456 0.7456298 2155 Q08378 GOLGA3 Golgin subfamily A member 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 75.877 73.587 2;3 2.378E-05 92126 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.96 59.391 18822000 0 11800000 0 0 0 0 0 0 0 0 0 0 0 7021900 0 1453 2155 1327 12630;12631;12632 10129;10130;10131 10129 3 AELQISTK Unmodified 888.49165 0.49164694 4538 Q9NP74 PALMD Palmdelphin yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 31.427 31.631 2 0.047929 33134 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.657 13.844 66351000 0 0 0 2991400 4839300 0 4234200 3588100 3637900 6297500 8087800 11195000 4219500 6612000 10648000 1454 4538 1328 12633;12634;12635;12636;12637;12638;12639;12640;12641;12642;12643 10132 10132 1 AELQLPPPPPPGHYGAWAAQELQAK Unmodified 2665.3653 0.36527122 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 0 0 By MS/MS 2 0 1 1 90.444 82.314 3 1.0931E-05 106696 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.618 43.391 18439000 18439000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1455 2290 1329 12644 10133;10134 10134 2 AELQMLLEEEIPSGK Acetyl (Protein N-term);Oxidation (M) 1743.8601 0.86006721 3297 Q8IZP0 ABI1 Abl interactor 1 yes yes 1 1 0 By MS/MS 2 0 2 2 99.662 94.949 2 1.1185E-38 117408 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.42 123.97 25673000 0 25673000 0 0 0 0 0 0 0 0 0 0 0 0 0 1456 3297 1330 12645;12646 10135;10136 10135 4897 2 AELQMLLEEEIPSGK Acetyl (Protein N-term) 1727.8652 0.86515259 3297 Q8IZP0 ABI1 Abl interactor 1 yes yes 1 0 0 By MS/MS 2 0 1 1 100.46 95.751 2 2.5403E-61 118341 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 181.98 155.23 93326000 0 93326000 0 0 0 0 0 0 0 0 0 0 0 0 0 1457 3297 1330 12647 10137 10137 1 AELQQLR Acetyl (Protein N-term) 898.48723 0.48723027 3769 Q96C01 FAM136A Protein FAM136A yes yes 1 0 0 By MS/MS By matching 10 0 2 1 1 58.993 59.385 2 0.025879 66885 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 48.174 30.934 9918700 0 0 0 0 0 0 0 0 0 0 0 0 0 3768400 6150300 1458 3769 1331 12648;12649 10138 10138 1 AELQQLRVQEAVESMVK Acetyl (Protein N-term);Oxidation (M) 2015.0357 0.035740164 3769 Q96C01 FAM136A Protein FAM136A yes yes 1 1 1 By MS/MS 2.5 0.5 1 1 2 84.502 80.504 3 0.0005543 96396 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 52.862 36.92 26500000 0 26500000 0 0 0 0 0 0 0 0 0 0 0 0 0 1459 3769 1332 12650;12651 10139;10140 10140 5328 2 AELQQLRVQEAVESMVK Acetyl (Protein N-term) 1999.0408 0.040825542 3769 Q96C01 FAM136A Protein FAM136A yes yes 1 0 1 By MS/MS By MS/MS 2.25 0.433 3 1 1 3 96.799 91.546 2;3 5.3865E-52 113498 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.14 101.64 57714000 7104400 50609000 0 0 0 0 0 0 0 0 0 0 0 0 0 1460 3769 1332 12652;12653;12654;12655 10141;10142;10143 10142 3 AELQTALAHTQHAAR Unmodified 1616.8383 0.83830141 2156 Q08379 GOLGA2 Golgin subfamily A member 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 2 1 2 1 1 1 1 1 35.144 35.352 3;4 0.0083464 38987 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 36.219 14.968 154210000 0 0 0 0 4142700 10980000 15563000 9977500 24172000 11134000 0 13391000 18124000 16858000 29867000 1461 2156 1333 12656;12657;12658;12659;12660;12661;12662;12663;12664;12665;12666;12667 10144;10145;10146;10147;10148 10145 5 AELRDDPIISTHLAK Unmodified 1677.905 0.90498399 129 O00231 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 1 2 1 1 2 2 2 2 2 2 55.797 56.002 3;4 0.0011282 63516 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 64.52 54.674 487510000 0 0 0 15691000 11468000 60142000 0 10714000 10746000 63047000 79471000 118320000 17098000 31965000 68847000 1462 129 1334 12668;12669;12670;12671;12672;12673;12674;12675;12676;12677;12678;12679;12680;12681;12682;12683;12684;12685 10149;10150;10151;10152;10153;10154;10155 10153 3 AELRVLVAVK Acetyl (Protein N-term) 1138.7074 0.7073938 1394 P38117 ETFB Electron transfer flavoprotein subunit beta yes yes 1 0 1 By MS/MS 2 0 1 1 90.608 82.478 2 0.011183 107043 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.224 35.039 3914200 3914200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1463 1394 1335 12686 10156 10156 1 AELSEEALLSVLPTIRVPK Acetyl (Protein N-term) 2106.1936 0.19362101 1488 P45974 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes yes 1 0 1 By MS/MS 2 0 2 2 102.35 97.636 2;3 9.9718E-24 120576 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 150.21 143.94 98859000 0 98859000 0 0 0 0 0 0 0 0 0 0 0 0 0 1464 1488 1336 12687;12688 10157;10158 10158 2 AELSVLEQLNVSPQISK Unmodified 1854.0098 0.0098429899 2664 Q32P41 TRMT5 tRNA (guanine(37)-N1)-methyltransferase yes yes 0 0 0 By MS/MS 2 0 1 1 91.486 86.576 2 6.3807E-52 107583 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 142.38 122.73 32620000 0 32620000 0 0 0 0 0 0 0 0 0 0 0 0 0 1465 2664 1337 12689 10159 10159 1 AELSYRGPVSGTEPEPVYSMEAADYR Oxidation (M) 2889.3127 0.31270289 2399 Q14247 CTTN Src substrate cortactin yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 69.988 70.259 3 6.9594E-24 80565 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 81.839 75.334 62512000 0 0 0 0 0 0 0 0 0 10200000 9410900 23205000 5722000 0 13975000 1466 2399 1338 12690;12691;12692;12693;12694 10160;10161;10162;10163;10164;10165 10164 3932 6 AELSYRGPVSGTEPEPVYSMEAADYR Unmodified 2873.3178 0.31778826 2399 Q14247 CTTN Src substrate cortactin yes yes 0 0 1 By MS/MS By matching By matching By MS/MS 10 0 4 1 1 1 1 76.714 76.893 3 3.8332E-15 88376 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.36 59.407 35493000 0 0 0 0 0 0 0 0 0 10770000 0 4441400 0 2888200 17393000 1467 2399 1338 12695;12696;12697;12698 10166;10167 10167 2 AELTSQESQISTYEEELAK Unmodified 2155.0168 0.016838441 1457 P42566 EPS15 Epidermal growth factor receptor substrate 15 yes yes 0 0 0 By MS/MS 2 0 2 2 81.567 76.863 2;3 1.9189E-23 95601 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 161.49 134.87 56027000 0 56027000 0 0 0 0 0 0 0 0 0 0 0 0 0 1468 1457 1339 12699;12700 10168;10169 10168 2 AELTSSAPACYALAISPDAK Unmodified 2034.9932 0.99320665 2104 Q04726 TLE3 Transducin-like enhancer protein 3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 80.419 79.648 2 4.7837E-37 97910 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.99 110.07 304050000 0 275980000 0 0 0 0 0 0 2917900 2596400 4167000 4924600 4283000 3189500 5996700 1469 2104 1340 12701;12702;12703;12704;12705;12706;12707;12708;12709 10170;10171;10172;10173;10174;10175;10176 10170 7 AELTSSAPACYALAVSPDAK Unmodified 2020.9776 0.97755658 2103 Q04725 TLE2 Transducin-like enhancer protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 79.699 74.987 2 1.7909E-12 93419 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.79 107.34 30823000 0 30823000 0 0 0 0 0 0 0 0 0 0 0 0 0 1470 2103 1341 12710 10177 10177 1 AELVQGQSAPVGMK Acetyl (Protein N-term);Oxidation (M) 1471.7341 0.73407884 3873 Q96I24 FUBP3 Far upstream element-binding protein 3 yes yes 1 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.31 2.4 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 65.259 65.753 2 1.6502E-08 70889 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 91.855 59.44 171960000 3075300 0 0 7729500 9830800 12779000 13635000 9978200 9545400 16531000 16728000 19812000 18519000 12203000 21590000 1471 3873 1342 12711;12712;12713;12714;12715;12716;12717;12718;12719;12720;12721;12722;12723 10178;10179;10180;10181;10182;10183;10184;10185;10186;10187;10188;10189;10190 10189 5381 13 AELVQGQSAPVGMK Acetyl (Protein N-term) 1455.7392 0.73916421 3873 Q96I24 FUBP3 Far upstream element-binding protein 3 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.31 2.4 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 75.912 76.379 2 8.9785E-06 84930 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 106.29 97.428 211200000 5810400 0 0 9424300 10481000 16435000 16046000 15678000 10592000 17970000 21571000 20437000 18773000 15998000 31989000 1472 3873 1342 12724;12725;12726;12727;12728;12729;12730;12731;12732;12733;12734;12735;12736 10191;10192;10193;10194;10195;10196;10197;10198;10199;10200;10201;10202;10203;10204 10191 13 AELVQLEDEITTLR Unmodified 1628.8621 0.86211612 2642 Q16890 TPD52L1 Tumor protein D53 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 88.072 88.142 2 5.1554E-13 102421 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 131.43 119.9 116030000 0 0 0 1527000 3965800 3418000 3573000 7606000 4573000 23825000 16274000 10499000 1872300 6571900 32321000 1473 2642 1343 12737;12738;12739;12740;12741;12742;12743;12744;12745;12746;12747;12748 10205;10206;10207;10208;10209;10210;10211;10212;10213;10214;10215;10216;10217;10218 10215 13 AELVQLEDEITTLRQVLSAK Unmodified 2255.2373 0.23727674 2642 Q16890 TPD52L1 Tumor protein D53 yes yes 0 0 1 By MS/MS 3 0 1 1 99.591 96.182 3 0.00014838 115385 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 53.779 50.726 3327800 0 3327800 0 0 0 0 0 0 0 0 0 0 0 0 0 1474 2642 1344 12749 10219 10219 1 AELVQLVSPFLGK Unmodified 1399.8075 0.80750177 3994 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 93.655 93.775 2 0.00081299 109017 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 69.979 62.334 3270500 0 0 0 0 0 0 0 0 0 3270500 0 0 0 0 0 1475 3994 1345 12750;12751;12752 10220;10221;10222;10223 10220 4 AEMDEQIK Unmodified 962.4379 0.43789681 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 20.987 21.33 2 0.014312 21739 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 70.69 35.441 43713000 0 0 0 0 0 4495200 0 0 2916300 3582000 7950500 7040000 4294300 5276600 8158000 1476 2291 1346 12753;12754;12755;12756;12757;12758;12759;12760 10224;10225;10226;10227;10228 10227 5 AEMDQILHGLDK Unmodified 1368.6708 0.6707503 783 P04424 ASL Argininosuccinate lyase yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 78.009 74.271 3 0.0097782 92878 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 49.423 40.525 36728000 0 34176000 2552100 0 0 0 0 0 0 0 0 0 0 0 0 1477 783 1347 12761;12762 10229 10229 1 AEMSTPLSVK Oxidation (M) 1077.5376 0.53761086 2313 Q13546 RIPK1 Receptor-interacting serine/threonine-protein kinase 1 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 2 31.737 32.012 2 0.0033693 34958 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 70.256 43.119 57237000 0 0 0 0 0 7507400 9285300 5247100 0 9182800 7166600 7307300 9992600 1547800 0 1478 2313 1348 12763;12764;12765;12766;12767;12768;12769;12770;12771 10230;10231;10232;10233;10234;10235;10236 10232 3775 7 AEMSTPLSVK Unmodified 1061.5427 0.54269624 2313 Q13546 RIPK1 Receptor-interacting serine/threonine-protein kinase 1 yes yes 0 0 0 By MS/MS 2 0 1 1 52.703 46.93 2 0.0096244 61156 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.598 57.979 64408000 0 64408000 0 0 0 0 0 0 0 0 0 0 0 0 0 1479 2313 1348 12772 10237 10237 0 AENAEGQTPAIGPDGEPLDETSQMSDLPVK Oxidation (M) 3111.419 0.41901845 1656 P51532 SMARCA4 Transcription activator BRG1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 74.981 75.134 3 2.8942E-12 86919 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 44.365 38.138 39139000 0 0 0 0 0 9541100 6749000 0 0 0 7383000 0 7423900 0 8041700 1480 1656 1349 12773;12774;12775;12776;12777 10238;10239;10240;10241 10241 2667 4 AENAEGQTPAIGPDGEPLDETSQMSDLPVK Unmodified 3095.4241 0.42410383 1656 P51532 SMARCA4 Transcription activator BRG1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 80.452 80.605 3 5.7333E-05 92961 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 34.558 16.156 21379000 0 0 0 0 0 0 0 0 0 0 4670900 0 3365900 4390200 8952500 1481 1656 1349 12778;12779;12780;12781 10242;10243;10244;10245 10242 4 AENAGLSSTAGLLR Unmodified 1358.7154 0.7153923 1052 P17275 JUNB Transcription factor jun-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.067 63.2 2 0.00013407 71325 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 102.4 80.163 88832000 0 0 0 0 12071000 9449600 8403700 0 7535500 10093000 10352000 0 8390500 7308000 15230000 1482 1052 1350 12782;12783;12784;12785;12786;12787;12788;12789;12790;12791;12792;12793 10246;10247;10248;10249;10250;10251;10252;10253;10254;10255;10256;10257;10258;10259 10249 13 AENDVDNELLDYEDDEVETAAGGDGAEAPAK Acetyl (Protein N-term) 3263.375 0.37496461 2347 Q13838 DDX39B Spliceosome RNA helicase DDX39B yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 5.5 4.5 2 2 1 1 1 1 94.154 95.76 3 1.5315E-118 86744 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 144.92 144.92 117010000 31867000 68560000 0 0 0 0 0 0 0 6033900 0 0 0 0 10545000 1483 2347 1351 12794;12795;12796;12797 10260;10261;10262;10263 10262 3 AENDVDNELLDYEDDEVETAAGGDGAEAPAKK Acetyl (Protein N-term) 3391.4699 0.46992763 2347 Q13838 DDX39B Spliceosome RNA helicase DDX39B yes yes 1 0 1 By MS/MS By MS/MS 1.33 0.471 2 1 2 1 107.29 110.37 3 3.9272E-206 92287 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 198.48 196.48 99963000 44864000 55098000 0 0 0 0 0 0 0 0 0 0 0 0 0 1484 2347 1352 12798;12799;12800 10264;10265;10266 10264 3 AENFFILR Unmodified 1008.5393 0.53926584 1806 P59998 ARPC4 Actin-related protein 2/3 complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.073 80.132 2 0.004491 92622 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 131.04 98.566 196060000 0 0 0 13981000 8515400 12886000 11304000 14467000 6379900 11742000 16412000 20098000 10395000 14521000 55358000 1485 1806 1353 12801;12802;12803;12804;12805;12806;12807;12808;12809;12810;12811;12812 10267;10268;10269;10270;10271;10272;10273;10274;10275;10276;10277;10278 10272 12 AENGESSGPPRPSR Acetyl (Protein N-term) 1481.6859 0.68588309 4899 Q9UHD9 UBQLN2 Ubiquilin-2 yes yes 1 0 1 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.891 21.097 2 4.1461E-05 21771 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 105.46 91.254 233080000 0 0 0 15764000 10612000 14646000 15109000 17436000 12496000 20782000 19742000 28649000 22333000 24918000 30599000 1486 4899 1354 12813;12814;12815;12816;12817;12818;12819;12820;12821;12822;12823;12824 10279;10280;10281;10282 10282 3 AENGESSGPPRPSRGPAAAQGSAAAPAEPK Acetyl (Protein N-term) 2856.3751 0.37506064 4899 Q9UHD9 UBQLN2 Ubiquilin-2 yes yes 1 0 2 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 38.828 38.867 3 1.8605E-14 43161 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 45.596 33.282 143130000 0 0 0 24248000 0 25296000 0 33817000 0 0 59768000 0 0 0 0 1487 4899 1355 12825;12826;12827;12828 10283;10284 10283 2 AENKVENETDEGDK Unmodified 1576.6853 0.68527397 3687 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.42 2 1 1 24 2 2 2 2 2 2 2 2 2 2 2 2 2 7.3778 7.2252 2;3 3.1868E-06 5175 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 91.961 87.495 251470000 0 43357000 0 8812000 9737500 5465800 14594000 8779300 1852100 17744000 48891000 25404000 15827000 19559000 31446000 1488 3687 1356 12829;12830;12831;12832;12833;12834;12835;12836;12837;12838;12839;12840;12841;12842;12843;12844;12845;12846;12847;12848;12849;12850;12851;12852;12853;12854 10285;10286;10287;10288;10289;10290;10291;10292;10293;10294;10295;10296;10297 10286 11 AENLGEVLRGDR Unmodified 1327.6844 0.68442653 3620 Q92544 TM9SF4 Transmembrane 9 superfamily member 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 52.49 52.483 3 0.0037837 58998 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 54.7 23.269 59212000 0 0 0 5715600 4504900 6812200 5998300 6692000 5411700 7131000 0 0 10670000 6275800 0 1489 3620 1357 12855;12856;12857;12858;12859;12860;12861;12862;12863 10298;10299;10300;10301;10302;10303 10300 6 AENLLDGPPNPK Acetyl (Protein N-term) 1305.6565 0.65648044 3662 Q92793 CREBBP CREB-binding protein yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 74.266 74.242 2 0.0031569 86075 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 87.298 68.027 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1490 3662 1358 12864;12865;12866;12867;12868;12869;12870;12871 10304;10305;10306;10307;10308;10309;10310;10311 10310 8 AENLLLDNNMNIK Unmodified 1500.7606 0.76062794 4331 Q9H0K1 SIK2 Serine/threonine-protein kinase SIK2 yes yes 0 0 0 By MS/MS 2 0 1 1 79.703 74.991 2 0.014015 93427 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.666 59.448 29793000 0 29793000 0 0 0 0 0 0 0 0 0 0 0 0 0 1491 4331 1359 12872 10312 10312 1 AENLQLLTENELHR Unmodified 1678.8638 0.86384745 615 O94992 HEXIM1 Protein HEXIM1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 70.688 70.743 3 0.014292 80537 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 45.014 40.123 130610000 0 0 0 5583200 4965100 13937000 5021900 7530100 6857000 13355000 0 17339000 9488900 13185000 33343000 1492 615 1360 12873;12874;12875;12876;12877;12878;12879;12880;12881;12882;12883 10313;10314;10315;10316 10315 3 AENMYAQIK Unmodified 1066.5117 0.51173046 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS 2 0 1 1 42.063 36.968 2 0.02931 48124 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.752 59.14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1493 5049 1361 12884 10317 10317 1 AENNSEVGASGYGVPGPTWDR Unmodified 2161.9665 0.96647463 2152 Q08211 DHX9 ATP-dependent RNA helicase A yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.238 69.311 2 0.0035827 79118 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 48.823 34.859 118010000 0 0 0 7431800 10072000 8666800 6573500 6116000 6126400 12005000 10593000 13621000 11649000 9678300 15479000 1494 2152 1362 12885;12886;12887;12888;12889;12890;12891;12892;12893;12894;12895;12896 10318;10319;10320;10321;10322;10323;10324 10321 7 AENNSEVGASGYGVPGPTWDRGANLK Unmodified 2645.247 0.24700658 2152 Q08211 DHX9 ATP-dependent RNA helicase A yes yes 0 0 1 By MS/MS 2 0 1 1 72.689 69.604 3 3.3182E-38 85280 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 111.6 101.75 20064000 0 0 20064000 0 0 0 0 0 0 0 0 0 0 0 0 1495 2152 1363 12897 10325;10326 10326 2 AENPEQQLK Unmodified 1055.5247 0.52473799 843 P07476 IVL Involucrin yes yes 0 0 0 By MS/MS 10 0 1 1 21.143 20.991 2 0.0043077 21851 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 87.251 51.894 25744000 0 0 0 25744000 0 0 0 0 0 0 0 0 0 0 0 1496 843 1364 12898 10327;10328 10328 2 AENPSLENHR Acetyl (Protein N-term) 1207.5582 0.55816338 163 O00505 KPNA3 Importin subunit alpha-4 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 24.176 24.038 2 0.00029441 26004 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 114.89 106.03 464070000 0 33852000 0 27362000 19702000 33273000 28312000 24617000 19977000 37612000 50155000 48576000 38585000 34663000 67389000 1497 163 1365 12899;12900;12901;12902;12903;12904;12905;12906;12907;12908;12909;12910;12911 10329;10330;10331;10332;10333;10334;10335;10336;10337;10338;10339;10340;10341;10342;10343;10344;10345;10346 10346 18 AENPSLENHRIK Acetyl (Protein N-term) 1448.7372 0.73719038 163 O00505 KPNA3 Importin subunit alpha-4 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 2 2 2 36.538 31.677 2;3 0.00063113 43802 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.342 73.022 487440000 51327000 146590000 289510000 0 0 0 0 0 0 0 0 0 0 0 0 1498 163 1366 12912;12913;12914;12915;12916;12917 10347;10348;10349;10350;10351;10352 10351 6 AENQPIRDVLK Unmodified 1281.7041 0.70409934 1464 P42704 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 49.931 45.107 3 0.0079359 59373 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 49.081 24.789 72970000 0 36362000 36608000 0 0 0 0 0 0 0 0 0 0 0 0 1499 1464 1367 12918;12919 10353;10354 10353 1 AENQVLAMR Unmodified 1030.523 0.52296385 1660 P51572 BCAP31 B-cell receptor-associated protein 31 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 38.869 39.383 2 0.0035332 42725 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 89.752 74.313 42697000 0 0 0 0 0 0 0 0 0 0 0 0 0 15535000 27161000 1500 1660 1368 12920;12921;12922;12923;12924;12925 10355;10356;10357;10358;10359;10360 10359 6 AENQVLAMR Oxidation (M) 1046.5179 0.51787847 1660 P51572 BCAP31 B-cell receptor-associated protein 31 yes yes 0 1 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 22.688 22.909 2 0.030283 24127 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 43.083 10.473 34604000 0 0 0 6968100 0 4509500 3648800 0 0 0 4886800 7576900 7013800 0 0 1501 1660 1368 12926;12927;12928;12929;12930;12931 10361 10361 2669 1 AENQVLAMRK Unmodified 1158.6179 0.61792687 1660 P51572 BCAP31 B-cell receptor-associated protein 31 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 29.003 27.792 3 0.017946 40513 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.592 49.634 198840000 77864000 20319000 0 0 0 0 0 0 0 0 26158000 22962000 8471300 18228000 24838000 1502 1660 1369 12932;12933;12934;12935;12936;12937;12938 10362;10363 10362 1 AENQVLAMRK Oxidation (M) 1174.6128 0.61284149 1660 P51572 BCAP31 B-cell receptor-associated protein 31 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS 6 4 2 2 1 1 1 1 16.395 14.388 3 0.0070425 21219 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.823 39.074 66558000 31390000 9431100 0 0 11926000 0 0 13810000 0 0 0 0 0 0 0 1503 1660 1369 12939;12940;12941;12942 10364;10365;10366 10364 2669 0 AENRVVQIEK Unmodified 1184.6513 0.65133548 2296 Q13464 ROCK1 Rho-associated protein kinase 1 yes yes 0 0 1 By MS/MS 2 0 1 1 27.126 24.07 3 0.00084971 30588 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 94.465 41.74 30249000 0 0 30249000 0 0 0 0 0 0 0 0 0 0 0 0 1504 2296 1370 12943 10367 10367 1 AENSHNAGQVDTR Unmodified 1397.6284 0.62836821 3250 Q8IWZ3 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 1 2 2 2 2 6.192 6.307 2;3 7.7983E-13 3580 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 113.25 107.25 168060000 0 0 0 10578000 10773000 11719000 13071000 14007000 13028000 12288000 16681000 17229000 16522000 12132000 20027000 1505 3250 1371 12944;12945;12946;12947;12948;12949;12950;12951;12952;12953;12954;12955;12956;12957;12958;12959;12960;12961;12962;12963;12964;12965;12966 10368;10369;10370;10371;10372;10373;10374 10371 6 AENSHNAGQVDTRSLAEACSDGDVNAVRK Unmodified 3070.4123 0.41225078 3250 Q8IWZ3 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 yes yes 0 0 2 By MS/MS 2 0 2 2 47.921 44.04 4;5 6.0175E-16 55712 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 75.226 74.327 29420000 0 0 29420000 0 0 0 0 0 0 0 0 0 0 0 0 1506 3250 1372 12967;12968 10375;10376;10377 10376 2 AENSVLTSTTGR Acetyl (Protein N-term) 1276.6259 0.62590859 4455 Q9H8V3 ECT2 Protein ECT2 yes yes 1 0 0 By MS/MS 10 0 1 1 52.05 52.732 2 0.0047638 59282 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 86.014 70.863 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1507 4455 1373 12969 10378 10378 1 AENTTGNWLTAK Unmodified 1304.6361 0.63607935 4741 Q9NYD6 HOXC10 Homeobox protein Hox-C10 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching 8.67 2.98 1 5 1 1 1 1 1 1 51.017 50.038 2 0.0021332 64519 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.43 71.593 60153000 0 32454000 0 4113600 3131100 0 0 0 0 6301900 0 0 0 5222300 8930700 1508 4741 1374 12970;12971;12972;12973;12974;12975 10379;10380 10379 2 AENVVEPGPPSAK Acetyl (Protein N-term) 1335.667 0.66704513 2171 Q09472 EP300 Histone acetyltransferase p300 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.18 2.59 1 10 1 1 1 1 1 1 1 1 1 1 1 56.866 57.401 2 0.00011793 59288 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 80.979 58.893 232630000 13063000 0 0 17268000 13109000 18929000 15166000 10642000 9987900 36072000 0 51236000 32677000 14477000 0 1509 2171 1375 12976;12977;12978;12979;12980;12981;12982;12983;12984;12985;12986 10381;10382;10383;10384;10385;10386;10387;10388;10389;10390;10391;10392 10382 12 AENYDIPSADR Unmodified 1249.5575 0.55749468 1137 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 39.144 39.415 2 0.00033372 42725 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.342 73.602 142560000 0 0 0 0 5547700 0 0 0 0 0 34049000 0 12275000 23220000 67471000 1510 1137 1376 12987;12988;12989;12990;12991;12992;12993;12994;12995 10393;10394;10395;10396;10397;10398;10399;10400;10401 10395 9 AENYDIPSADRHK Unmodified 1514.7114 0.71136956 1137 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 25.604 25.516 3 0.0024302 27347 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 52.891 44.178 334710000 0 0 14240000 8517800 8533400 20583000 17049000 13488000 11799000 23375000 38211000 31274000 15719000 0 131920000 1511 1137 1377 12996;12997;12998;12999;13000;13001;13002;13003;13004;13005;13006;13007 10402;10403;10404;10405;10406;10407;10408;10409;10410;10411;10412 10402 7 AEPAAPPAAPSTPAPPPAVPK Unmodified 1933.0309 0.030912783 1546 P48634 PRRC2A Protein PRRC2A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 1 2 2 2 62.805 62.884 2;3 2.5169E-05 72294 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 68.972 61.061 281730000 0 0 0 19984000 20904000 19836000 23379000 18679000 20027000 23407000 29999000 18590000 24805000 29166000 32958000 1512 1546 1378 13008;13009;13010;13011;13012;13013;13014;13015;13016;13017;13018;13019;13020;13021;13022;13023;13024;13025;13026;13027;13028;13029;13030 10413;10414;10415;10416;10417;10418;10419;10420;10421;10422;10423;10424;10425;10426 10422 11 AEPAIIPATRNEPIGLK Unmodified 1789.0098 0.0097834104 4181 Q9BVA0 KATNB1 Katanin p80 WD40 repeat-containing subunit B1 yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 75.044 71.842 3 0.006665 87519 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 42.277 32.08 15585000 0 2109600 13475000 0 0 0 0 0 0 0 0 0 0 0 0 1513 4181 1379 13031;13032 10427;10428 10428 2 AEPASVAAESLAGSR Acetyl (Protein N-term) 1456.7158 0.71578623 4575 Q9NQT5 EXOSC3 Exosome complex component RRP40 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.158 75.217 2 4.5079E-10 87137 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 113.24 90.5 207160000 0 0 0 10043000 11914000 11603000 13870000 14139000 10517000 19995000 22373000 24570000 16857000 18479000 32794000 1514 4575 1380 13033;13034;13035;13036;13037;13038;13039;13040;13041;13042;13043;13044 10429;10430;10431;10432;10433;10434;10435;10436;10437;10438;10439;10440;10441;10442 10441 14 AEPAVPQAPQK Unmodified 1134.6033 0.60332266 1004 P14649 MYL6B Myosin light chain 6B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 31.751 31.857 2 0.0057723 34655 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 58.23 42.588 87631000 0 0 0 8949300 7922400 8536800 6899100 6122900 6120700 10266000 0 16920000 7932200 7960900 0 1515 1004 1381 13045;13046;13047;13048;13049;13050;13051;13052;13053;13054;13055 10443;10444;10445;10446;10447;10448;10449;10450;10451;10452;10453;10454 10446 12 AEPDESNAR Unmodified 987.42575 0.42575222 1833 P61088;Q5JXB2 UBE2N;UBE2NL Ubiquitin-conjugating enzyme E2 N;Putative ubiquitin-conjugating enzyme E2 N-like yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 5.9739 6.0952 2 0.024533 3851 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 50.607 45.752 13572000 0 0 0 1029100 560420 3109400 1952100 1363900 1361600 715800 735450 0 929610 677600 1136800 1516 1833 1382 13056;13057;13058;13059;13060;13061;13062;13063;13064;13065;13066 10455;10456 10456 2 AEPDESNARYFHVVIAGPQDSPFEGGTFK Unmodified 3164.4839 0.48394239 1833 P61088 UBE2N Ubiquitin-conjugating enzyme E2 N yes yes 0 0 1 By MS/MS 2 0 2 2 89.234 81.103 3;4 7.7773E-22 105433 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.126 75.638 69846000 69846000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1517 1833 1383 13067;13068 10457;10458;10459 10458 3 AEPDYIEDDNPELIRPQK Acetyl (Protein N-term) 2183.0382 0.038242585 4318 Q9H098 FAM107B Protein FAM107B yes yes 1 0 1 By MS/MS By MS/MS By matching By MS/MS By matching 5.25 3.7 3 2 3 1 4 1 1 1 77.706 74.729 2;3 1.7584E-118 92408 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 217.88 205.26 292570000 7132300 264660000 0 0 0 0 0 0 0 0 5021100 0 0 3914300 11843000 1518 4318 1384 13069;13070;13071;13072;13073;13074;13075;13076 10460;10461;10462;10463;10464 10460 5 AEPEAIPERR Unmodified 1166.6044 0.60438529 3713 Q969F9 HPS3 Hermansky-Pudlak syndrome 3 protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 21.887 22.073 3 0.00082742 22897 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 77.192 35.652 84254000 0 0 0 0 6895200 0 11141000 11540000 8399900 11298000 0 0 15282000 8746600 10952000 1519 3713 1385 13077;13078;13079;13080;13081;13082;13083;13084;13085 10465;10466;10467;10468;10469;10470;10471;10472;10473 10465 7 AEPEAIPERRQSPK Unmodified 1606.8427 0.84271808 3713 Q969F9 HPS3 Hermansky-Pudlak syndrome 3 protein yes yes 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 23.645 19.673 3 0.015177 28184 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.869 41.703 19990000 18397000 0 1592700 0 0 0 0 0 0 0 0 0 0 0 0 1520 3713 1386 13086;13087 10474 10474 0 AEPEDHYFLLTEPPLNTPENR Unmodified 2481.1812 0.18121843 1835 P61158 ACTR3 Actin-related protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 82.73 82.892 3 1.9346E-09 95558 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.029 59.72 38667000 0 0 0 0 0 0 0 2143600 0 0 0 4736300 0 6905500 24881000 1521 1835 1387 13088;13089;13090;13091 10475;10476;10477 10475 3 AEPGEGTRPATVGDSSARPAR Unmodified 2081.025 0.024992557 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 22.266 22.471 3;4 1.3257E-05 23063 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 58.49 55.049 371830000 0 0 0 13643000 17299000 24270000 17216000 20898000 24466000 36980000 48089000 59021000 40848000 39127000 29977000 1522 4139 1388 13092;13093;13094;13095;13096;13097;13098;13099;13100;13101;13102;13103;13104;13105;13106;13107;13108;13109;13110;13111;13112;13113;13114;13115 10478;10479;10480;10481;10482;10483;10484;10485;10486;10487;10488 10487 11 AEPLTAPPTNGLPHTQDR Unmodified 1913.9595 0.95953875 4802 Q9P206 KIAA1522 Uncharacterized protein KIAA1522 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 54.454 54.402 3 0.016916 62185 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 22.01 11.814 29639000 0 0 0 0 9008700 5388300 10423000 0 4819100 0 0 0 0 0 0 1523 4802 1389 13116;13117;13118;13119 10489 10489 1 AEPMQWASLELPAAK Oxidation (M) 1656.8181 0.81814282 4896 Q9UHD1 CHORDC1 Cysteine and histidine-rich domain-containing protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.06 3.8 5 1 10 1 4 1 1 1 1 1 1 1 1 1 1 1 81.518 79.845 2;3 2.1393E-30 98773 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.37 111.48 942340000 10327000 839230000 7785100 0 0 9137600 5190200 6888300 3382000 8681700 8734900 7504900 5476400 8327300 21672000 1524 4896 1390 13120;13121;13122;13123;13124;13125;13126;13127;13128;13129;13130;13131;13132;13133;13134;13135 10490;10491;10492;10493;10494;10495;10496;10497;10498;10499;10500;10501;10502;10503;10504 10493 6250 15 AEPMQWASLELPAAK Unmodified 1640.8232 0.82322819 4896 Q9UHD1 CHORDC1 Cysteine and histidine-rich domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.08 3.71 3 2 8 4 1 1 1 1 1 1 1 1 1 87.098 85.742 2;3 8.7186E-15 106533 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 153.38 139.42 2500700000 0 2412500000 10038000 0 0 5163200 0 4404100 0 8386200 5883500 6301800 2957900 7564600 37463000 1525 4896 1390 13136;13137;13138;13139;13140;13141;13142;13143;13144;13145;13146;13147;13148 10505;10506;10507;10508;10509;10510;10511;10512;10513;10514;10515 10508 10 AEPPKAPEQEQAAPGPAAGGEAPK Unmodified 2297.1288 0.12878893 1993 P80723 BASP1 Brain acid soluble protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 36.659 35.715 3 4.0186E-35 39327 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 87.511 72.741 929200000 18132000 298050000 0 40776000 46101000 9417500 41293000 38683000 9164900 41431000 64693000 135750000 51923000 60772000 73005000 1526 1993 1391 13149;13150;13151;13152;13153;13154;13155;13156;13157;13158;13159;13160;13161;13162;13163 10516;10517;10518;10519;10520;10521;10522;10523;10524;10525;10526;10527;10528;10529;10530;10531;10532;10533;10534;10535;10536 10533 21 AEPPQAMNALMR 2 Oxidation (M) 1359.6275 0.62750527 2207 Q12906 ILF3 Interleukin enhancer-binding factor 3 yes yes 0 2 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 32.179 32.242 2 0.0047345 34172 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.442 23.655 32166000 0 0 0 5180600 3980300 9880900 0 3342700 0 0 0 0 0 3225200 6555900 1527 2207 1392 13164;13165;13166;13167;13168;13169 10537;10538 10538 3589;3590 2 AEPPQAMNALMR Oxidation (M) 1343.6326 0.63259065 2207 Q12906 ILF3 Interleukin enhancer-binding factor 3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 49.048 49.163 2 0.011664 55517 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 41.876 24.012 91453000 0 0 0 9744400 5609200 12833000 0 5071700 9290700 0 0 16066000 0 8641400 24196000 1528 2207 1392 13170;13171;13172;13173;13174;13175;13176;13177 10539 10539 3589;3590 1 AEPPQAMNALMR Unmodified 1327.6377 0.63767603 2207 Q12906 ILF3 Interleukin enhancer-binding factor 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 63.807 63.856 2 0.010482 72102 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 46.462 37.768 116560000 0 0 0 7739600 6189500 13545000 7475100 9264200 5238500 17363000 14065000 12722000 10396000 12562000 0 1529 2207 1392 13178;13179;13180;13181;13182;13183;13184;13185;13186;13187;13188 10540;10541;10542;10543;10544 10542 4 AEPSAATQSHSISSSSFGAEPSAPGGGGSPGACPALGTK Acetyl (Protein N-term) 3611.6434 0.64343251 626 O95197 RTN3 Reticulon-3 yes yes 1 0 0 By MS/MS 10 0 1 1 73.035 73.22 3 3.2399E-45 84333 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 61.28 56.566 10213000 0 0 0 0 0 0 0 10213000 0 0 0 0 0 0 0 1530 626 1393 13189 10545 10545 1 AEPSGAETRPPIR Acetyl (Protein N-term) 1421.7263 0.72629134 4609 Q9NRR5 UBQLN4 Ubiquilin-4 yes yes 1 0 1 By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 40.951 41.005 2 0.0017072 46164 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 85.377 69.488 341040000 0 0 0 29274000 33085000 33093000 0 44938000 0 53538000 0 0 0 51312000 95795000 1531 4609 1394 13190;13191;13192;13193;13194;13195;13196 10546;10547;10548 10548 1 AEPSQAPTPAPAAQPR Acetyl (Protein N-term) 1629.8111 0.8110836 3668 Q92830 KAT2A Histone acetyltransferase KAT2A yes yes 1 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 45.559 45.819 2 1.0373E-05 51200 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 86.772 74.196 46260000 0 0 0 6211000 0 0 0 0 4116200 7117000 0 13572000 6031100 4546700 4666100 1532 3668 1395 13197;13198;13199;13200;13201;13202;13203 10549;10550;10551;10552;10553 10552 5 AEPTAAPHPVLK Unmodified 1229.6768 0.67682195 3208 Q86YP4 GATAD2A Transcriptional repressor p66-alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.64 2.92 3 2 23 4 1 2 2 2 1 2 2 2 2 2 2 2 2 34.015 33.364 2;3 0.0016138 35791 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 66.435 47.164 626770000 0 263880000 25352000 16759000 21081000 29522000 20990000 23163000 23381000 31250000 34998000 31535000 26062000 33553000 45239000 1533 3208 1396 13204;13205;13206;13207;13208;13209;13210;13211;13212;13213;13214;13215;13216;13217;13218;13219;13220;13221;13222;13223;13224;13225;13226;13227;13228;13229;13230;13231 10554;10555;10556;10557;10558;10559;10560;10561;10562;10563;10564;10565;10566;10567;10568;10569;10570;10571;10572;10573 10570 19 AEPTVCSFLTK Acetyl (Protein N-term) 1293.6275 0.6274885 3863 Q96H79 ZC3HAV1L Zinc finger CCCH-type antiviral protein 1-like yes yes 1 0 0 By MS/MS 1 0 1 1 105.43 106.33 2 0.010255 98102 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 48.284 31.188 8788800 0 8788800 0 0 0 0 0 0 0 0 0 0 0 0 0 1534 3863 1397 13232 10574 10574 1 AEPVEVVAPR Unmodified 1065.5819 0.58185893 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45.725 44.904 2 0.0029455 50422 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 78.516 50.298 1271700000 5161000 129010000 0 52256000 49554000 85290000 82613000 71269000 63689000 108900000 135310000 120080000 91449000 104380000 172750000 1535 894 1398 13233;13234;13235;13236;13237;13238;13239;13240;13241;13242;13243;13244;13245;13246 10575;10576;10577;10578;10579 10578 4 AEPVEVVAPRGK Unmodified 1250.6983 0.69828568 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 39.873 34.901 3 0.0039825 48100 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.267 51.123 901880000 106220000 594830000 200830000 0 0 0 0 0 0 0 0 0 0 0 0 1536 894 1399 13247;13248;13249;13250 10580;10581;10582;10583;10584;10585;10586;10587;10588 10585 9 AEPYAADEGSGEGHK Unmodified 1516.643 0.64301522 3903 Q96K76 USP47 Ubiquitin carboxyl-terminal hydrolase 47 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 14.629 14.014 3 7.398E-07 16400 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 101.75 93.842 202120000 6537100 132940000 0 2326100 3109000 4987700 2714900 3404500 1814100 7342800 7108900 5037000 4466000 5690000 14639000 1537 3903 1400 13251;13252;13253;13254;13255;13256;13257;13258;13259;13260;13261;13262;13263;13264;13265 10589;10590;10591;10592;10593;10594;10595;10596;10597;10598;10599;10600;10601;10602;10603 10595 13 AEPYETSQGK Unmodified 1108.5037 0.50366819 3148 Q86UE8 TLK2 Serine/threonine-protein kinase tousled-like 2 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 12.489 12.654 2 0.034153 11902 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 41.876 26.24 7409000 0 0 0 0 447980 1382900 0 684240 1082600 0 0 1553100 0 914330 1343800 1538 3148 1401 13266;13267;13268;13269;13270;13271;13272 10604 10604 1 AEPYPAAAGR Unmodified 1001.493 0.49304393 922 P10588 NR2F6 Nuclear receptor subfamily 2 group F member 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 24.135 24.243 2 0.031837 25842 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 42.599 33.686 58113000 0 0 0 5307700 4228100 5414200 6196600 6698900 4073900 7476400 0 8508200 10209000 0 0 1539 922 1402 13273;13274;13275;13276;13277;13278;13279;13280;13281 10605;10606;10607;10608;10609 10605 5 AEQATVTSEFESYK Unmodified 1588.7257 0.72568222 3242 Q8IWJ2 GCC2 GRIP and coiled-coil domain-containing protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 64.14 58.232 2 0.0015173 74537 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.356 62.914 43107000 0 43107000 0 0 0 0 0 0 0 0 0 0 0 0 0 1540 3242 1403 13282 10610 10610 1 AEQDVENDLLDYDEEEEPQAPQESTPAPPK Acetyl (Protein N-term) 3424.4954 0.4954141 118 O00148 DDX39A ATP-dependent RNA helicase DDX39A yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 85.598 85.711 3 9.9428E-25 99140 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.052 61.377 45867000 0 0 0 0 0 7995000 0 0 0 12434000 0 9672100 0 0 15766000 1541 118 1404 13283;13284;13285;13286 10611;10612;10613;10614;10615 10614 5 AEQDVENDLLDYDEEEEPQAPQESTPAPPKK Acetyl (Protein N-term) 3552.5904 0.59037711 118 O00148 DDX39A ATP-dependent RNA helicase DDX39A yes yes 1 0 1 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 81.848 80.805 3 4.0937E-29 94217 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.283 65.304 91306000 28419000 0 0 0 0 10730000 3727500 0 3885100 17124000 0 11695000 0 0 15726000 1542 118 1405 13287;13288;13289;13290;13291;13292;13293 10616;10617;10618;10619;10620 10618 5 AEQEAEEPRK Unmodified 1185.5626 0.56258006 4430 Q9H788 SH2D4A SH2 domain-containing protein 4A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching 7.4 3.68 4 1 10 2 3 1 1 1 1 1 1 1 1 1 1 6.1263 5.0795 2;3 0.0013349 4868 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 78.655 65.699 455900000 36822000 388470000 0 3340500 2403100 3605200 4360500 2099800 2651300 2824700 4413500 0 2503800 2409700 0 1543 4430 1406 13294;13295;13296;13297;13298;13299;13300;13301;13302;13303;13304;13305;13306;13307;13308 10621;10622;10623;10624;10625;10626 10624 6 AEQEEEFISNTLFK Unmodified 1683.7992 0.79918151 2598 Q16204 CCDC6 Coiled-coil domain-containing protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 2 2 2 2 2 1 2 2 2 2 2 83.33 83.412 2;3 0.0015527 96925 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 71.555 64.896 214710000 0 0 0 2636600 6629600 12586000 8503500 13200000 14365000 10670000 24589000 25217000 13041000 20492000 62780000 1544 2598 1407 13309;13310;13311;13312;13313;13314;13315;13316;13317;13318;13319;13320;13321;13322;13323;13324;13325;13326;13327;13328;13329;13330 10627;10628;10629 10629 3 AEQEEEGLPLPLANIK Unmodified 1749.9149 0.91487997 3382 Q8NAF0 ZNF579 Zinc finger protein 579 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 86.303 85.781 2 7.6277E-06 99686 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 96.103 82.675 146540000 0 38750000 0 4730200 7033400 6899200 6263300 4537100 7188500 11077000 10237000 13869000 10855000 12018000 13083000 1545 3382 1408 13331;13332;13333;13334;13335;13336;13337;13338;13339;13340;13341;13342;13343;13344 10630;10631;10632;10633;10634;10635;10636;10637;10638;10639;10640;10641;10642 10639 13 AEQEEYVQEGIR Unmodified 1449.6736 0.67358707 2215 Q12965 MYO1E Unconventional myosin-Ie no no 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 41.354 41.558 2 0.00067768 45253 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 91.549 55.216 29459000 0 0 0 0 0 0 0 0 11464000 0 0 0 0 17995000 0 1546 2215 1409 13345;13346 10643 10643 1 AEQENNFPTSSIAFLGQNER Unmodified 2251.0505 0.050538606 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.37 82.431 3 4.1821E-05 94673 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 52.03 46.067 113960000 0 0 0 2645900 4279400 9635500 3802600 6768300 5398500 8976100 7116000 11775000 12228000 15773000 25561000 1547 619 1410 13347;13348;13349;13350;13351;13352;13353;13354;13355;13356;13357;13358 10644;10645;10646;10647;10648;10649;10650;10651;10652;10653 10651 10 AEQENQELPDEGTLEETLTNETR Unmodified 2645.194 0.19402754 1638 P50851 LRBA Lipopolysaccharide-responsive and beige-like anchor protein yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 81.062 81.085 3 5.925E-09 93853 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 45.305 41.049 26102000 0 0 0 0 3155000 6255400 0 4042100 0 8983800 0 0 3665900 0 0 1548 1638 1411 13359;13360;13361;13362;13363 10654;10655;10656;10657 10654 4 AEQEPTAEQLAQIAAENEEDEHSVNYKPPAQK Acetyl (Protein N-term) 3605.6758 0.6757785 1689 P52565 ARHGDIA Rho GDP-dissociation inhibitor 1 yes yes 1 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.8 4 1 8 2 2 1 1 1 1 1 1 1 2 82.119 80.093 3;4 3.3313E-240 99670 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 215.98 211.36 1588500000 211910000 836880000 29318000 1942900 6673200 0 0 0 7319500 0 59993000 61041000 0 29862000 343560000 1549 1689 1412 13364;13365;13366;13367;13368;13369;13370;13371;13372;13373;13374;13375;13376 10658;10659;10660;10661;10662;10663;10664;10665;10666;10667 10658 9 AEQERQHNYLK Unmodified 1414.6953 0.69532556 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 1 By MS/MS By MS/MS 2 0 4 2 2 13.266 10.11 2;3 2.3172E-08 15337 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 133.23 87.226 366260000 341290000 0 24973000 0 0 0 0 0 0 0 0 0 0 0 0 1550 2930 1413 13377;13378;13379;13380 10668;10669 10668 1 AEQINQAAGEASAVLAK Unmodified 1669.8635 0.8635131 4951 Q9UJZ1 STOML2 Stomatin-like protein 2, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.455 66.54 2 1.2581E-13 76199 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 120.87 97.636 87587000 0 0 0 5718100 4754500 7910800 7383200 5323700 4826600 8100400 13427000 8916900 9489200 3448300 8288000 1551 4951 1414 13381;13382;13383;13384;13385;13386;13387;13388;13389;13390;13391;13392 10670;10671;10672;10673;10674;10675;10676;10677;10678;10679;10680;10681;10682 10676 13 AEQIVPLSAASFER Unmodified 1516.7886 0.78855725 2310 Q13535 ATR Serine/threonine-protein kinase ATR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 79.481 79.571 2 0.01069 92039 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 39.917 20.13 39938000 0 0 0 0 3371800 3156400 3121500 3893800 2219000 4097700 4885900 5321100 4185700 5684700 0 1552 2310 1415 13393;13394;13395;13396;13397;13398;13399;13400;13401;13402 10683;10684;10685;10686 10686 4 AEQLAAEAERDQPLR Unmodified 1695.854 0.85401105 4521 Q9HCS7 XAB2 Pre-mRNA-splicing factor SYF1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 45.281 45.462 3 0.00035263 49839 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.261 51.633 118210000 0 0 0 8817600 6838400 0 8387800 6719000 7858800 9339400 13528000 12646000 14089000 13686000 16305000 1553 4521 1416 13403;13404;13405;13406;13407;13408;13409;13410;13411;13412;13413 10687;10688;10689;10690;10691;10692;10693;10694;10695;10696 10689 8 AEQLAAEAERDQPLRAQSK Unmodified 2110.0767 0.076693777 4521 Q9HCS7 XAB2 Pre-mRNA-splicing factor SYF1 yes yes 0 0 2 By MS/MS By MS/MS By matching By matching 10 0 4 1 1 1 1 40.657 41.057 4 0.033784 45780 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 24.893 18.334 32890000 0 0 0 0 0 6170300 4072700 0 0 0 0 9797000 0 0 12850000 1554 4521 1417 13414;13415;13416;13417 10697 10697 1 AEQLASLEAAQR Unmodified 1285.6626 0.66262845 616 O95049 TJP3 Tight junction protein ZO-3 yes yes 0 0 0 By MS/MS 10 0 1 1 48.028 47.505 2 0.00061776 53907 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 76.927 33.383 12692000 0 0 0 0 12692000 0 0 0 0 0 0 0 0 0 0 1555 616 1418 13418 10698 10698 1 AEQLGAEGNVDESQK Unmodified 1573.722 0.72199382 4557 Q9NQ29 LUC7L Putative RNA-binding protein Luc7-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 26.569 26.321 2 1.0492E-26 27924 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 142.83 126.63 273410000 5469500 0 0 12015000 20617000 25115000 21368000 14913000 11582000 27086000 25331000 28218000 30915000 23867000 26916000 1556 4557 1419 13419;13420;13421;13422;13423;13424;13425;13426;13427;13428;13429;13430;13431 10699;10700;10701;10702;10703;10704;10705;10706;10707;10708;10709;10710 10708 12 AEQLMSDENCFK Oxidation (M) 1486.6068 0.60682941 3994 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.68 1.57 1 24 1 2 2 2 2 2 2 2 2 2 2 2 2 36.41 36.383 2 7.9744E-05 40528 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 87.298 84.566 124350000 0 6864600 0 8904900 7398300 9330000 8847200 7677200 9026200 10048000 8719100 15028000 9933200 10379000 12194000 1557 3994 1420 13432;13433;13434;13435;13436;13437;13438;13439;13440;13441;13442;13443;13444;13445;13446;13447;13448;13449;13450;13451;13452;13453;13454;13455;13456 10711;10712;10713;10714;10715;10716;10717;10718;10719;10720;10721;10722;10723;10724 10712 5473 14 AEQLMSDENCFK Unmodified 1470.6119 0.61191479 3994 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 50.983 50.12 2 2.6029E-05 55788 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 121.6 92.876 141440000 0 75917000 0 0 3525600 0 7538400 13176000 0 0 0 0 0 13266000 28020000 1558 3994 1420 13457;13458;13459;13460;13461;13462;13463 10725;10726;10727;10728;10729;10730;10731;10732 10727 8 AEQQDSGRLYLENK Unmodified 1649.8009 0.80091285 3308 Q8N163 CCAR2 Cell cycle and apoptosis regulator protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 32.702 33.036 3 0.00069992 35900 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 60.157 50.378 83810000 0 0 0 0 0 9431100 0 7173800 6125700 9272200 11470000 12592000 7213900 7298600 13233000 1559 3308 1421 13464;13465;13466;13467;13468;13469;13470;13471;13472 10733;10734;10735;10736;10737;10738;10739;10740;10741 10737 9 AEQQQVVQIPQQALR Unmodified 1734.9377 0.9376811 2070 Q02086 SP2 Transcription factor Sp2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 67.467 67.56 2 5.5179E-10 77470 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 95.573 89.333 60927000 0 0 0 5043300 4592000 0 5019000 4725800 4480200 6189300 7903600 7606300 4849300 3458700 7059200 1560 2070 1422 13473;13474;13475;13476;13477;13478;13479;13480;13481;13482;13483 10742;10743;10744;10745;10746;10747;10748;10749;10750 10746 9 AEQVALSR Acetyl (Protein N-term) 914.48214 0.48214489 947 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 1 1 2 45.226 45.44 2 0.0024792 49675 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 88.819 53.186 632660000 0 0 0 20907000 24282000 47066000 34170000 32781000 28183000 43271000 82142000 76475000 31329000 61647000 150410000 1561 947 1423 13484;13485;13486;13487;13488;13489;13490;13491;13492;13493;13494;13495;13496 10751;10752;10753;10754;10755;10756;10757;10758;10759;10760 10757 10 AERAALEELVK Acetyl (Protein N-term) 1269.6929 0.69286595 961 P12081 HARS Histidine--tRNA ligase, cytoplasmic yes yes 1 0 1 By MS/MS By MS/MS By MS/MS 1.86 0.35 1 6 2 3 2 85.855 83.758 2 0.00092962 96452 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 86.624 56.37 2964400000 137200000 2470100000 357090000 0 0 0 0 0 0 0 0 0 0 0 0 1562 961 1424 13497;13498;13499;13500;13501;13502;13503 10761;10762;10763;10764;10765 10765 4 AERDSALETLQGQLEEK Unmodified 1915.9487 0.9486993 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 1 By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 2 1 1 64.595 64.741 3;4 1.3143E-06 79102 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.96 65.982 33435000 0 0 0 0 967330 3325900 1067100 1743400 0 3440900 0 7897500 7270900 2804700 4917700 1563 2459 1425 13504;13505;13506;13507;13508;13509;13510;13511;13512;13513 10766;10767;10768;10769;10770;10771 10767 6 AERELSEQIQR Unmodified 1357.695 0.69499121 1017 P15311 EZR Ezrin yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 26.333 26.237 3 0.0005931 33077 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 90.614 68.036 128670000 0 0 63111000 0 1826700 4944800 0 0 4187700 0 9776400 9665800 3001500 8998900 23158000 1564 1017 1426 13514;13515;13516;13517;13518;13519;13520;13521;13522 10772;10773;10774;10775;10776 10774 4 AERGELDLTGAK Acetyl (Protein N-term) 1300.6623 0.6622941 992 P13984 GTF2F2 General transcription factor IIF subunit 2 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 52.123 50.714 2 1.4567E-14 64245 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 162.49 120.38 1811300000 16581000 991900000 5192400 55933000 48005000 57011000 48881000 0 53943000 70930000 105850000 112390000 84132000 56816000 103720000 1565 992 1427 13523;13524;13525;13526;13527;13528;13529;13530;13531;13532;13533;13534;13535;13536;13537 10777;10778;10779;10780;10781;10782;10783;10784;10785;10786;10787;10788;10789;10790;10791;10792;10793;10794 10781 17 AERGGDGGESER Acetyl (Protein N-term) 1260.5331 0.53307084 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 6.6501 6.7101 2 9.569E-05 3754 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 103.34 74.384 29317000 0 0 0 3357800 0 6125600 7220200 0 5747900 0 0 0 0 6865500 0 1566 213 1428 13538;13539;13540;13541;13542 10795;10796;10797;10798 10797 4 AERGGDGGESERFNPGELR Acetyl (Protein N-term) 2073.9464 0.94640789 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 1 0 2 By MS/MS By MS/MS 10 0 2 1 1 50.642 50.781 3 7.8855E-07 57525 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 76.301 64.695 86885000 0 0 0 0 0 0 40702000 0 0 0 0 0 0 46183000 0 1567 213 1429 13543;13544 10799;10800 10799 2 AERGYSFSLTTFSPSGK Acetyl (Protein N-term) 1875.9003 0.90029254 1194 P25787 PSMA2 Proteasome subunit alpha type-2 yes yes 1 0 1 By MS/MS 2 0 1 1 87.813 79.683 2 1.1123E-35 103735 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 131.66 115.41 15300000 15300000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1568 1194 1430 13545 10801 10801 1 AERPDVDEK Unmodified 1057.504 0.50400254 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 10.548 7.4207 2 0.012513 10158 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 162.88 108.27 112080000 19109000 90066000 2900500 0 0 0 0 0 0 0 0 0 0 0 0 1569 2392 1431 13546;13547;13548 10802 10802 0 AERPEDLNLPNAVITR Acetyl (Protein N-term) 1848.9694 0.96937516 4599 Q9NRF9 POLE3 DNA polymerase epsilon subunit 3 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.71 1.4 1 23 1 2 2 1 2 2 2 2 2 2 2 2 2 79.427 79.348 2;3 1.398E-28 91600 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 140.31 114.61 1128400000 0 4899500 0 50641000 71982000 47510000 60148000 80917000 60208000 130890000 142000000 134780000 73189000 84706000 186520000 1570 4599 1432 13549;13550;13551;13552;13553;13554;13555;13556;13557;13558;13559;13560;13561;13562;13563;13564;13565;13566;13567;13568;13569;13570;13571;13572 10803;10804;10805;10806;10807;10808;10809;10810;10811;10812;10813;10814;10815;10816;10817;10818;10819;10820;10821;10822;10823;10824;10825 10816 20 AERVHELNEEIGK Unmodified 1522.774 0.77396981 5141 Q9Y383 LUC7L2 Putative RNA-binding protein Luc7-like 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.17 3.36 8 27 3 2 3 2 1 2 2 2 2 3 2 3 3 2 3 30.237 29.403 2;3;4 1.1055E-11 31343 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 94.059 84.314 1100800000 85881000 15348000 61243000 36965000 15836000 85905000 53674000 80528000 78742000 101000000 85413000 110560000 103050000 75121000 111510000 1571 5141 1433 13573;13574;13575;13576;13577;13578;13579;13580;13581;13582;13583;13584;13585;13586;13587;13588;13589;13590;13591;13592;13593;13594;13595;13596;13597;13598;13599;13600;13601;13602;13603;13604;13605;13606;13607 10826;10827;10828;10829;10830;10831;10832;10833;10834;10835;10836;10837;10838;10839;10840;10841;10842;10843;10844;10845;10846;10847;10848;10849;10850;10851;10852;10853;10854 10834 28 AESALAQQAK Unmodified 1015.5298 0.52982336 4043 Q99661 KIF2C Kinesin-like protein KIF2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14.214 13.822 2 1.696E-06 13414 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 133.6 89.205 250230000 189040 18862000 0 15258000 18505000 16998000 18025000 14453000 12689000 23853000 34409000 17063000 22905000 18844000 18182000 1572 4043 1434 13608;13609;13610;13611;13612;13613;13614;13615;13616;13617;13618;13619;13620;13621 10855;10856;10857;10858;10859;10860;10861;10862;10863;10864;10865;10866;10867;10868 10856 11 AESDLFLAEHHK Unmodified 1395.6783 0.67827852 1638 P50851 LRBA Lipopolysaccharide-responsive and beige-like anchor protein yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 47.941 42.083 3 0.029486 52672 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 36.284 28.309 43214000 7654800 0 35559000 0 0 0 0 0 0 0 0 0 0 0 0 1573 1638 1435 13622;13623 10869 10869 1 AESDWDTVTVLR Acetyl (Protein N-term) 1432.6834 0.68342347 438 O60869 EDF1 Endothelial differentiation-related factor 1 yes yes 1 0 0 By MS/MS 10 0 1 1 85.295 85.463 2 9.8818E-05 98767 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.417 64.149 4377500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4377500 1574 438 1436 13624 10870 10870 1 AESDWDTVTVLRK Acetyl (Protein N-term) 1560.7784 0.77838649 438 O60869 EDF1 Endothelial differentiation-related factor 1 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.18 3.74 3 1 7 1 2 1 1 1 1 1 1 1 1 78.471 76.812 2 1.5232E-89 94601 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 249.23 249.23 806330000 39954000 638010000 11492000 4153000 0 7104200 0 7234800 0 0 19359000 20301000 0 14095000 44623000 1575 438 1437 13625;13626;13627;13628;13629;13630;13631;13632;13633;13634;13635 10871;10872;10873;10874;10875;10876;10877;10878;10879;10880;10881;10882;10883;10884 10872 12 AESEEMETSQAGSK Oxidation (M) 1498.6093 0.60933183 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.95 4.02 3 3 1 12 3 3 1 1 1 1 1 1 1 1 1 1 1 1 1 18.216 16.982 2 2.135E-88 92097 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 217.14 210.7 532970000 204320000 235250000 2985100 1856800 1366300 2172400 2070200 1658000 2330900 3889000 18324000 8324000 2832900 13157000 32427000 1576 1337 1438 13636;13637;13638;13639;13640;13641;13642;13643;13644;13645;13646;13647;13648;13649;13650;13651;13652;13653;13654 10885;10886;10887;10888;10889;10890;10891;10892;10893;10894;10895;10896;10897;10898;10899;10900;10901 10891 2013 17 AESEEMETSQAGSK Unmodified 1482.6144 0.61441721 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.59 3.76 2 2 1 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 24.525 24.36 2 3.3227E-173 99657 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 306.48 276.81 507870000 165210000 154270000 0 3649300 3219000 5158100 4051500 3889600 2867500 5132400 23672000 25819000 5893600 22191000 82856000 1577 1337 1438 13655;13656;13657;13658;13659;13660;13661;13662;13663;13664;13665;13666;13667;13668;13669;13670;13671 10902;10903;10904;10905;10906;10907;10908;10909;10910;10911;10912;10913;10914;10915;10916;10917;10918;10919 10914 18 AESFAQEMFIEQNK Oxidation (M) 1686.7559 0.75593649 6 A0MZ66 KIAA1598 Shootin-1 yes yes 0 1 0 By MS/MS 2 0 1 1 66.589 60.671 2 2.3747E-34 77588 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 157.97 140.75 21118000 0 21118000 0 0 0 0 0 0 0 0 0 0 0 0 0 1578 6 1439 13672 10920 10920 9 1 AESFAQEMFIEQNK Unmodified 1670.761 0.76102187 6 A0MZ66 KIAA1598 Shootin-1 yes yes 0 0 0 By MS/MS 2 0 2 2 80.996 76.291 2;3 2.2497E-52 94947 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 190.15 173.13 178810000 0 178810000 0 0 0 0 0 0 0 0 0 0 0 0 0 1579 6 1439 13673;13674 10921;10922;10923 10922 3 AESFFQTK Unmodified 956.46035 0.46034682 987 P13798 APEH Acylamino-acid-releasing enzyme yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.42 3.66 3 1 8 1 2 1 1 1 1 1 1 1 2 45.039 43.355 2 0.0039595 55772 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.89 92.099 521690000 21307000 411030000 13836000 9873700 2041600 0 0 0 0 2790100 10975000 10466000 0 8991900 30380000 1580 987 1440 13675;13676;13677;13678;13679;13680;13681;13682;13683;13684;13685;13686 10924;10925;10926;10927;10928;10929;10930;10931 10924 6 AESGALIEAAK Unmodified 1058.5608 0.56078914 4467 Q9H9A5 CNOT10 CCR4-NOT transcription complex subunit 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 36.646 36.629 2 6.9746E-05 40523 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 112.75 70.639 86794000 0 0 0 13317000 12290000 0 14644000 0 11006000 0 0 0 17945000 17592000 0 1581 4467 1441 13687;13688;13689;13690;13691;13692 10932;10933;10934;10935;10936 10932 3 AESGESGGPPGSQDSAAGAEGAGAPAAAASAEPK Acetyl (Protein N-term) 2951.3017 0.30168051 5018 Q9UMX0 UBQLN1 Ubiquilin-1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.69 3.07 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 56.827 56.722 3 8.9302E-59 61864 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 90.559 90.559 979270000 208720000 0 0 35607000 42010000 0 69073000 72724000 67890000 70673000 98940000 88456000 71643000 68321000 85207000 1582 5018 1442 13693;13694;13695;13696;13697;13698;13699;13700;13701;13702;13703;13704;13705 10937;10938;10939;10940;10941;10942;10943;10944;10945;10946;10947;10948;10949;10950;10951;10952;10953;10954;10955 10946 19 AESGPDLR Unmodified 843.40865 0.4086456 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 15.789 15.859 2 0.036676 15599 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 89.296 38.398 259780000 0 0 0 74424000 17996000 19311000 15488000 66033000 15353000 21056000 0 30117000 0 0 0 1583 1029 1443 13706;13707;13708;13709;13710;13711;13712;13713 10956 10956 0 AESGPDLRYEVTSGGGGTSR Unmodified 1994.9294 0.92936084 1029 P15924 DSP Desmoplakin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.036 46.204 3 5.4958E-53 51707 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 96.131 87.637 532110000 0 0 0 74748000 22686000 29653000 26764000 144870000 28548000 26828000 47675000 49306000 39383000 21400000 20245000 1584 1029 1444 13714;13715;13716;13717;13718;13719;13720;13721;13722;13723;13724;13725 10957;10958;10959;10960;10961;10962;10963;10964;10965;10966;10967;10968;10969;10970;10971;10972;10973;10974 10965 18 AESIDALSNK Unmodified 1046.5244 0.52440364 4858 Q9UBT6 POLK DNA polymerase kappa yes yes 0 0 0 By MS/MS 2 0 1 1 37.395 32.48 2 0.02362 42510 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.614 32.651 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1585 4858 1445 13726 10975 10975 1 AESIIIR Acetyl (Protein N-term) 842.48617 0.48616764 3476 Q8TAT6 NPLOC4 Nuclear protein localization protein 4 homolog yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.686 71.758 2 0.0077724 81847 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.07 75.562 90948000 0 0 0 5930200 3938500 7746400 5816600 4802500 3699200 8643100 10568000 9428400 5737600 8022000 16615000 1586 3476 1446 13727;13728;13729;13730;13731;13732;13733;13734;13735;13736;13737;13738 10976;10977;10978;10979;10980;10981;10982;10983;10984;10985;10986;10987;10988 10980 13 AESIIIRVQSPDGVK Acetyl (Protein N-term) 1652.9097 0.90973501 3476 Q8TAT6 NPLOC4 Nuclear protein localization protein 4 homolog yes yes 1 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 84.903 80.252 2 4.3782E-38 101813 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 160.69 139.91 90545000 11210000 73880000 5454000 0 0 0 0 0 0 0 0 0 0 0 0 1587 3476 1447 13739;13740;13741;13742 10989;10990;10991;10992 10991 4 AESLIGVYPEQGDCVISK Unmodified 1963.9561 0.95609286 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 77.586 77.06 2 1.0778E-62 88795 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 170.95 157.14 1013500000 0 842590000 0 6052800 8238800 13123000 10721000 8777400 10393000 19244000 18622000 16428000 14367000 19978000 24966000 1588 2431 1448 13743;13744;13745;13746;13747;13748;13749;13750;13751;13752;13753;13754;13755;13756 10993;10994;10995;10996;10997;10998;10999;11000;11001;11002;11003;11004;11005;11006 10997 14 AESPEEVACRK Unmodified 1274.5925 0.59249998 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 17.329 17.515 3 0.008453 15953 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 29.264 23.607 48405000 0 0 0 0 2911900 11592000 3641700 4447400 0 0 4492700 0 4312100 5492000 11515000 1589 3119 1449 13757;13758;13759;13760;13761;13762;13763;13764 11007;11008;11009;11010;11011;11012 11011 6 AESQLLECK Unmodified 1076.5172 0.51720977 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 6.71 3.81 2 1 4 1 2 1 1 1 1 33.033 30.607 2 0.00011473 39733 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 152.47 93.484 455580000 13728000 375380000 0 0 0 0 0 0 0 16935000 0 0 0 19535000 30004000 1590 965 1450 13765;13766;13767;13768;13769;13770;13771 11013;11014;11015;11016;11017;11018;11019;11020;11021;11022 11016 10 AESQNTFEETELELK Unmodified 1766.821 0.82103917 2734 Q5JSH3 WDR44 WD repeat-containing protein 44 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching 8 3.33 2 2 11 2 2 1 1 1 1 1 1 1 1 1 1 1 71.379 70.024 2;3 8.1017E-91 87704 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 260.22 224.51 765010000 15327000 668180000 0 2792300 3003100 6353800 0 4158200 4181800 5534100 8243600 18070000 4192400 9407400 15560000 1591 2734 1451 13772;13773;13774;13775;13776;13777;13778;13779;13780;13781;13782;13783;13784;13785;13786 11023;11024;11025;11026;11027 11023 5 AESQNTFEETELELKK Unmodified 1894.916 0.91600218 2734 Q5JSH3 WDR44 WD repeat-containing protein 44 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.56 3.86 3 1 5 1 2 1 1 1 1 1 1 62.173 59.781 3 0.0034802 79900 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.639 31.212 124910000 15695000 49678000 4732300 0 5476100 0 0 0 0 0 7916700 13287000 0 6959500 21169000 1592 2734 1452 13787;13788;13789;13790;13791;13792;13793;13794;13795 11028;11029;11030;11031;11032 11031 4 AESSEDETSSPAPSK Unmodified 1520.6478 0.64782583 3934 Q96NA2 RILP Rab-interacting lysosomal protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 10.906 11.022 2 6.6377E-19 9972 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 108.37 108.37 21572000 0 0 0 1272000 923790 1809900 1781800 1233700 1003600 1795900 0 4276200 2075900 2323600 3076100 1593 3934 1453 13796;13797;13798;13799;13800;13801;13802;13803;13804;13805;13806 11033;11034;11035;11036;11037;11038;11039;11040 11038 8 AESSESFTMASSPAQR Acetyl (Protein N-term) 1726.7468 0.74682837 1590 P49736 MCM2 DNA replication licensing factor MCM2 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 61.22 61.298 2 1.5191E-42 69959 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 161.99 147.75 56518000 0 0 0 2735800 3670200 5531800 2657800 0 2120700 0 9580500 9458000 0 5571200 15192000 1594 1590 1454 13807;13808;13809;13810;13811;13812;13813;13814;13815 11041;11042;11043;11044;11045;11046;11047;11048;11049;11050;11051 11049 11 AESSESFTMASSPAQR Acetyl (Protein N-term);Oxidation (M) 1742.7417 0.74174299 1590 P49736 MCM2 DNA replication licensing factor MCM2 yes yes 1 1 0 By MS/MS 10 0 1 1 48.356 48.792 2 0.012061 54886 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 55.261 48.408 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1595 1590 1454 13816 11052 11052 2556 1 AESSFSEEEEEK Unmodified 1399.5627 0.56269921 5281 Q9Y6G5 COMMD10 COMM domain-containing protein 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 22.096 22.264 2 0.010166 22895 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 46.844 43.063 50032000 0 0 0 3177900 1982900 5038700 7335400 0 2653600 0 7039800 9220800 8136200 5447100 0 1596 5281 1455 13817;13818;13819;13820;13821;13822;13823;13824;13825 11053 11053 1 AESTESIGSSEK Unmodified 1223.5517 0.5517406 4267 Q9BZI7 UPF3B Regulator of nonsense transcripts 3B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.156 13.312 2 0.00033522 12579 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 81.865 62.594 32267000 0 0 0 1485100 1557900 3474500 1852100 1117600 2044600 4040800 2468800 2735000 4729300 2433800 4327200 1597 4267 1456 13826;13827;13828;13829;13830;13831;13832;13833;13834;13835;13836;13837 11054;11055;11056;11057;11058;11059;11060;11061;11062;11063;11064 11055 11 AESTLQNSSSAVHTESNK Unmodified 1888.8763 0.87626263 4462 Q9H967 WDR76 WD repeat-containing protein 76 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 20.718 20.159 3 1.3952E-05 20789 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 56.424 43.006 50038000 0 17436000 0 2992700 2324300 2806800 2975100 2640400 3299700 4743300 0 4448000 3333600 3037800 0 1598 4462 1457 13838;13839;13840;13841;13842;13843;13844;13845;13846;13847;13848;13849;13850 11065;11066;11067;11068;11069;11070;11071;11072;11073 11066 8 AESTPEIAEQR Unmodified 1229.5888 0.58879481 2232 Q13098 GPS1 COP9 signalosome complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.027 28.222 2 0.00038093 30539 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 87.258 66.929 151340000 0 0 0 7706400 7650800 10831000 10950000 8854800 5893100 9579200 18750000 17366000 17097000 12278000 24379000 1599 2232 1458 13851;13852;13853;13854;13855;13856;13857;13858;13859;13860;13861;13862 11074;11075;11076;11077;11078;11079;11080;11081;11082;11083;11084 11084 10 AESTPEIAEQRGER Unmodified 1571.754 0.75396265 2232 Q13098 GPS1 COP9 signalosome complex subunit 1 yes yes 0 0 1 By MS/MS By matching 10 0 2 1 1 23.781 24.197 3 0.001931 25666 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 73.927 60.827 22585000 0 0 0 0 0 0 0 0 0 8814800 0 13770000 0 0 0 1600 2232 1459 13863;13864 11085 11085 0 AESTPEIAEQRGERDSQTQAILTK Unmodified 2657.3257 0.32565083 2232 Q13098 GPS1 COP9 signalosome complex subunit 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 49.379 48.196 4 0.00013005 63678 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 55.734 48.703 467990000 40767000 29814000 304810000 0 4103800 10923000 0 8670700 5103400 12133000 7295700 12256000 6145400 8989500 16982000 1601 2232 1460 13865;13866;13867;13868;13869;13870;13871;13872;13873;13874;13875;13876;13877 11086;11087;11088;11089;11090;11091;11092;11093;11094;11095 11088 10 AESVAAPITVR Unmodified 1112.619 0.61897272 3903 Q96K76 USP47 Ubiquitin carboxyl-terminal hydrolase 47 yes yes 0 0 0 By MS/MS 10 0 1 1 49.791 50.014 2 0.034992 55614 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 52.579 39.201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1602 3903 1461 13878 11096 11096 1 AESVERLEEAASR Unmodified 1445.711 0.71103521 2583 Q15814 TBCC Tubulin-specific chaperone C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 41.772 42.526 3 0.0057898 46897 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 44.44 32.381 8945600 0 0 0 0 0 0 0 0 0 0 0 8945600 0 0 0 1603 2583 1462 13879;13880;13881 11097;11098;11099 11099 3 AETAAGVGRFK Acetyl (Protein N-term) 1147.5986 0.59857163 2188 Q12788 TBL3 Transducin beta-like protein 3 yes yes 1 0 1 By MS/MS 2.5 0.5 1 1 2 49.971 45.075 2 0.0079328 58506 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.684 49.454 3317600 0 3317600 0 0 0 0 0 0 0 0 0 0 0 0 0 1604 2188 1463 13882;13883 11100;11101 11100 2 AETAANRICK Unmodified 1132.5659 0.56589129 356;971 O43707;P12814 ACTN4;ACTN1 Alpha-actinin-4;Alpha-actinin-1 no no 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 12.732 9.547 2 8.7409E-28 12720 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 200.54 163.52 444910000 218560000 135060000 91289000 0 0 0 0 0 0 0 0 0 0 0 0 1605 356;971 1464 13884;13885;13886 11102;11103;11104;11105;11106 11104 5 AETDHLFDLSR Unmodified 1302.6204 0.62042929 4550 Q9NPF5 DMAP1 DNA methyltransferase 1-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 62.17 62.259 3 0.01206 70097 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.006 26.596 109460000 0 0 0 5999400 6841500 11687000 11269000 11070000 7296900 12812000 930330 11821000 12879000 0 16850000 1606 4550 1465 13887;13888;13889;13890;13891;13892;13893;13894;13895;13896;13897 11107;11108;11109 11107 3 AETECQNTEYQQLLDIK Unmodified 2081.9575 0.95754942 72 CON__P13645;P13645 KRT10 Keratin, type I cytoskeletal 10 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 32 3 4 3 2 2 3 2 3 3 3 2 2 78.479 78.508 2;3 0 91211 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 318.88 297.01 + 34290000000 0 0 0 9229100000 2450500000 2497800000 1769500000 1570400000 1434300000 3687700000 2052300000 2422100000 3556500000 2131200000 1488800000 1607 72 1466 13898;13899;13900;13901;13902;13903;13904;13905;13906;13907;13908;13909;13910;13911;13912;13913;13914;13915;13916;13917;13918;13919;13920;13921;13922;13923;13924;13925;13926;13927;13928;13929 11110;11111;11112;11113;11114;11115;11116;11117;11118;11119;11120;11121;11122;11123;11124;11125;11126;11127;11128;11129;11130;11131;11132;11133;11134;11135;11136;11137;11138;11139;11140;11141;11142;11143;11144;11145;11146;11147;11148;11149;11150 11143 37 AETEEGPDVLR Unmodified 1214.5779 0.57789577 2536 Q15436 SEC23A Protein transport protein Sec23A yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 38.421 38.835 2 0.0014582 43152 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 72.607 60.371 18241000 0 0 0 0 0 0 0 0 0 3546600 3724000 0 0 2778300 8192100 1608 2536 1467 13930;13931;13932;13933 11151;11152;11153 11151 3 AETEERSLDNFFAK Acetyl (Protein N-term) 1697.7897 0.78967946 4980 Q9UKY7 CDV3 Protein CDV3 homolog yes yes 1 0 1 By MS/MS 3 0 1 1 83.643 80.392 2 6.4462E-39 96204 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 160.52 135.83 406510000 0 406510000 0 0 0 0 0 0 0 0 0 0 0 0 0 1609 4980 1468 13934 11154 11154 1 AETEQHIK Unmodified 954.47706 0.47705951 3944 Q96P48 ARAP1 Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 5.8793 2.5785 2 0.01467 4623 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.352 69.616 52480000 0 52480000 0 0 0 0 0 0 0 0 0 0 0 0 0 1610 3944 1469 13935;13936 11155 11155 1 AETEQQCLSLK Unmodified 1305.6235 0.62346575 3242 Q8IWJ2 GCC2 GRIP and coiled-coil domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 35.656 36.175 2 0.0040386 38852 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 97.965 75.225 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1611 3242 1470 13937;13938 11156;11157 11156 2 AETHSSSTPVQHPIK Unmodified 1617.8111 0.8110836 4138 Q9BTA9 WAC WW domain-containing adapter protein with coiled-coil yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 1 2 2 2 2 2 2 2 12.852 13.007 3;4 4.2977E-20 11696 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 80.96 74.379 285100000 0 0 0 14935000 13270000 35017000 24629000 6722600 20496000 29099000 18240000 38032000 27599000 21665000 35393000 1612 4138 1471 13939;13940;13941;13942;13943;13944;13945;13946;13947;13948;13949;13950;13951;13952;13953;13954;13955;13956;13957;13958;13959;13960;13961 11158;11159;11160;11161;11162;11163;11164;11165;11166;11167;11168;11169;11170;11171;11172;11173;11174;11175 11172 18 AETIQADTPALSLIAETVEDMVK Unmodified 2444.2356 0.23562176 2558 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 0 0 0 By MS/MS 2 0 1 1 105.09 96.958 3 0.015624 124466 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 24.397 15.903 4649200 4649200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1613 2558 1472 13962 11176 11176 1 AETLAGAMPNEAGGHPDAR Unmodified 1863.8534 0.85335912 5260 Q9Y613 FHOD1 FH1/FH2 domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 2 1 1 44.182 44.571 3 3.0722E-17 48816 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.012 67.73 46150000 0 0 0 0 0 0 0 12831000 0 0 0 0 0 12563000 20756000 1614 5260 1473 13963;13964;13965;13966;13967;13968;13969;13970 11177;11178;11179;11180;11181;11182;11183;11184 11179 8 AETLAGAMPNEAGGHPDAR Oxidation (M) 1879.8483 0.84827374 5260 Q9Y613 FHOD1 FH1/FH2 domain-containing protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 29.552 29.905 3 3.3898E-05 32455 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 63.337 52.55 23273000 0 0 0 0 0 0 7586300 0 0 0 0 7764100 0 7922300 0 1615 5260 1473 13971;13972;13973 11185;11186;11187 11185 6656 1 AETLEFNDVYQEVK Acetyl (Protein N-term) 1725.8097 0.8097462 2163 Q08945 SSRP1 FACT complex subunit SSRP1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.47 3.93 3 2 12 3 2 1 1 1 1 1 1 1 1 1 1 1 1 90.503 90.459 2 5.3071E-45 90212 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 207.29 184.65 490250000 105920000 99707000 0 5532000 17449000 20605000 18421000 20502000 17190000 36154000 31195000 33770000 17361000 21722000 44726000 1616 2163 1474 13974;13975;13976;13977;13978;13979;13980;13981;13982;13983;13984;13985;13986;13987;13988;13989;13990 11188;11189;11190;11191;11192;11193;11194;11195;11196;11197;11198;11199;11200;11201;11202;11203;11204;11205;11206;11207;11208 11195 21 AETLELSDLYVSDK Unmodified 1581.7774 0.77738344 3418 Q8NDI1 EHBP1 EH domain-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 79.991 80.112 2 0.0030949 92282 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.081 11.753 18612000 0 0 0 0 0 2021300 1717900 0 0 0 0 0 2016000 0 12856000 1617 3418 1475 13991;13992;13993;13994;13995 11209;11210;11211;11212 11211 4 AETLPEVEAELAQR Unmodified 1554.789 0.78895118 2239;479 O75334;O75335;Q13136 PPFIA2;PPFIA4;PPFIA1 Liprin-alpha-2;Liprin-alpha-4;Liprin-alpha-1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 77.953 78.036 2 0.00038724 90193 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 89.403 76.827 41064000 0 0 0 0 6303800 0 4213800 0 0 0 0 10611000 5154900 5221000 9559200 1618 479;2239 1476 13996;13997;13998;13999;14000;14001;14002 11213;11214;11215;11216;11217;11218 11217 6 AETLPGSGDSGPGTASLGPGVAETGTR Acetyl (Protein N-term) 2483.1776 0.17758961 2377 Q14151 SAFB2 Scaffold attachment factor B2 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 77.059 77.056 3 2.1989E-18 89258 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 62.605 54.707 38647000 0 0 0 2849500 3596200 4092600 0 3384200 0 5669100 0 0 5051100 4280600 9723800 1619 2377 1477 14003;14004;14005;14006;14007;14008;14009;14010 11219;11220;11221;11222;11223;11224;11225;11226 11224 7 AETLPGSGDSGPGTASLGPGVAETGTRR Acetyl (Protein N-term) 2639.2787 0.27870064 2377 Q14151 SAFB2 Scaffold attachment factor B2 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 71.814 71.994 3 3.4226E-21 82322 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.231 61.461 66652000 0 0 0 0 0 7884900 0 6621400 5661100 9126300 12448000 0 0 11307000 13604000 1620 2377 1478 14011;14012;14013;14014;14015;14016;14017 11227;11228;11229;11230;11231;11232;11233 11229 7 AETLSGLGDSGAAGAAALSSASSETGTR Acetyl (Protein N-term) 2536.1889 0.18888258 2532 Q15424 SAFB Scaffold attachment factor B1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 2 1 1 1 83.822 83.979 3 2.084E-60 97450 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 105.46 101.58 54891000 0 0 0 0 0 0 5857000 0 6025500 10825000 6525200 12758000 0 4509800 8391000 1621 2532 1479 14018;14019;14020;14021;14022;14023;14024;14025 11234;11235;11236;11237;11238;11239;11240;11241 11241 8 AETLSGLGDSGAAGAAALSSASSETGTRR Acetyl (Protein N-term) 2692.29 0.28999361 2532 Q15424 SAFB Scaffold attachment factor B1 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 80.3 80.403 3 6.673E-108 93096 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 132.35 128.78 260740000 0 0 0 0 20976000 14671000 15149000 16242000 18054000 30788000 22999000 36827000 12455000 27278000 45297000 1622 2532 1480 14026;14027;14028;14029;14030;14031;14032;14033;14034;14035;14036 11242;11243;11244;11245;11246;11247;11248;11249;11250;11251;11252;11253 11252 12 AETNDSYHIILK Unmodified 1402.7092 0.70924429 2192 Q12800 TFCP2 Alpha-globin transcription factor CP2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 52.517 51.485 3 0.0055867 56920 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 48.513 36.945 185880000 0 40047000 26106000 9877900 7146000 0 11937000 0 0 21160000 20340000 0 0 14759000 34510000 1623 2192 1481 14037;14038;14039;14040;14041;14042;14043;14044;14045 11254;11255;11256 11256 3 AETPHGAEEECK Unmodified 1356.5616 0.56159378 5273 Q9Y6A5 TACC3 Transforming acidic coiled-coil-containing protein 3 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.64 2.9 1 1 9 2 1 1 1 1 1 1 1 1 1 7.2364 6.7296 3 0.00025936 6999 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 90.614 87.576 96653000 0 70047000 0 1985200 1285800 2294500 0 2901700 0 2471300 3916800 3033500 3121600 0 5595200 1624 5273 1482 14046;14047;14048;14049;14050;14051;14052;14053;14054;14055;14056 11257;11258;11259;11260 11259 4 AETPHGAEEECRHGGVCAPAAVATSPPGAIPK Unmodified 3223.5139 0.51387908 5273 Q9Y6A5 TACC3 Transforming acidic coiled-coil-containing protein 3 yes yes 0 0 1 By MS/MS 2 0 1 1 57.222 53.37 5 0.024377 66634 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 14.053 7.477 6522300 0 0 6522300 0 0 0 0 0 0 0 0 0 0 0 0 1625 5273 1483 14057 11261 11261 1 AETPSANHSESDSLSQHNDFLSDK Unmodified 2615.1372 0.13718136 5000 Q9ULM3 YEATS2 YEATS domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 47.363 47.605 4 2.3013E-11 53083 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.152 54.11 89498000 0 0 0 0 7038900 8575400 4331300 3441300 0 10577000 12817000 17354000 7585400 5505800 12272000 1626 5000 1484 14058;14059;14060;14061;14062;14063;14064;14065;14066;14067 11262;11263;11264;11265;11266;11267 11266 6 AETPTAAEDDNEGDK Unmodified 1561.638 0.63798942 437 O60841 EIF5B Eukaryotic translation initiation factor 5B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.79 2.98 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 21.483 21.704 2 4.2983E-56 92202 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 167.2 160.82 170520000 20053000 0 0 9723600 4622900 13225000 10606000 9038300 10496000 14027000 17939000 15800000 14028000 10597000 20363000 1627 437 1485 14068;14069;14070;14071;14072;14073;14074;14075;14076;14077;14078;14079;14080;14081 11268;11269;11270;11271;11272;11273;11274;11275;11276;11277;11278;11279;11280;11281;11282 11273 15 AETPTAAEDDNEGDKK Unmodified 1689.733 0.73295244 437 O60841 EIF5B Eukaryotic translation initiation factor 5B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.43 3.14 5 1 24 2 4 2 3 2 2 2 2 2 1 2 2 2 2 11.197 10.673 2;3 1.4453E-15 9806 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 102.38 100.36 389460000 33274000 79157000 0 16763000 12980000 23070000 30113000 16619000 11489000 21671000 22554000 34790000 24388000 20787000 41808000 1628 437 1486 14082;14083;14084;14085;14086;14087;14088;14089;14090;14091;14092;14093;14094;14095;14096;14097;14098;14099;14100;14101;14102;14103;14104;14105;14106;14107;14108;14109;14110;14111 11283;11284;11285;11286;11287;11288;11289;11290;11291;11292;11293;11294;11295;11296;11297;11298;11299;11300;11301;11302 11284 19 AETPTESVSEPEVATK Unmodified 1673.7996 0.79957544 1081 P18858 LIG1 DNA ligase 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching 8.06 3.38 1 1 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 47.39 46.87 2 1.1624E-41 92671 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 186.36 164.03 356380000 30612000 18125000 0 18431000 18073000 28234000 24084000 19285000 23919000 24069000 34328000 27705000 27663000 22624000 39231000 1629 1081 1487 14112;14113;14114;14115;14116;14117;14118;14119;14120;14121;14122;14123;14124;14125;14126;14127 11303;11304;11305;11306;11307 11306 5 AETQEGEPIAK Unmodified 1171.5721 0.57208211 5038 Q9UNP9 PPIE Peptidyl-prolyl cis-trans isomerase E yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 16.398 16.546 2 0.0047039 15158 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.828 35.906 36261000 0 0 0 1144600 711860 3840900 1627500 1997100 2325500 2231300 4470200 0 3051700 5340300 9519900 1630 5038 1488 14128;14129;14130;14131;14132;14133;14134;14135;14136;14137;14138 11308;11309;11310;11311 11308 4 AETRAEEAPEK Unmodified 1229.5888 0.58879481 3955 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.6 3 1 27 1 2 1 2 2 2 2 3 3 2 2 2 3 2 2 6.6004 6.3154 2;3 1.2247E-05 4698 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 111.52 87.775 720710000 5787200 104810000 2654300 33110000 33389000 33507000 48586000 45875000 59010000 56403000 66680000 62040000 56341000 42234000 70278000 1631 3955 1489 14139;14140;14141;14142;14143;14144;14145;14146;14147;14148;14149;14150;14151;14152;14153;14154;14155;14156;14157;14158;14159;14160;14161;14162;14163;14164;14165;14166;14167;14168;14169 11312;11313;11314;11315;11316;11317;11318;11319;11320;11321;11322;11323;11324;11325;11326;11327;11328;11329;11330 11327 14 AETSEDSASRGETTGR Unmodified 1652.7238 0.72378474 1046 P17029 ZKSCAN1 Zinc finger protein with KRAB and SCAN domains 1 yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 6.7301 6.8489 3 2.8787E-11 4615 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 97.417 94.783 121950000 0 0 0 7578500 7761800 9280400 7193600 7225500 7914500 0 20422000 9510600 12860000 13530000 18675000 1632 1046 1490 14170;14171;14172;14173;14174;14175;14176;14177;14178;14179;14180 11331;11332;11333;11334 11334 4 AETSEDSASRGETTGRSQK Unmodified 1995.9094 0.90935368 1046 P17029 ZKSCAN1 Zinc finger protein with KRAB and SCAN domains 1 yes yes 0 0 2 By MS/MS 2 0 1 1 6.1675 3.9499 3 0.012601 5697 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 48.547 32.911 5650300 0 0 5650300 0 0 0 0 0 0 0 0 0 0 0 0 1633 1046 1491 14181 11335 11335 1 AETSLGIPGPSEISTEVK Unmodified 1813.9309 0.93092397 4616 Q9NRY5 FAM114A2 Protein FAM114A2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 78.665 78.356 2 3.5542E-20 90638 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 131.13 122.62 583670000 0 253980000 0 12072000 21564000 23249000 21109000 30417000 23340000 33670000 25691000 38558000 35392000 24085000 40540000 1634 4616 1492 14182;14183;14184;14185;14186;14187;14188;14189;14190;14191;14192;14193;14194 11336;11337;11338;11339;11340;11341;11342;11343;11344;11345;11346;11347;11348;11349;11350 11344 15 AETVADTR Acetyl (Protein N-term) 903.42977 0.42977497 404 O60493 SNX3 Sorting nexin-3 yes yes 1 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 28.047 28.353 2 0.010661 30542 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 53.968 32.197 29812000 0 0 0 0 0 0 4202400 2885100 0 6115700 5909600 6569700 0 4129900 0 1635 404 1493 14195;14196;14197;14198;14199;14200 11351;11352;11353 11351 3 AETVADTR Unmodified 861.41921 0.41921028 404 O60493 SNX3 Sorting nexin-3 yes yes 0 0 0 By MS/MS 10 0 1 1 10.447 10.642 2 0.036964 9412 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 51.572 0.60643 934220000 0 0 0 0 0 0 0 0 0 0 0 0 934220000 0 0 1636 404 1493 14201 11354 11354 1 AETVADTRR Acetyl (Protein N-term) 1059.5309 0.530886 404 O60493 SNX3 Sorting nexin-3 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 23.055 22.635 2 1.0482E-13 24175 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 168.27 121.2 852480000 0 21312000 0 36057000 24524000 84492000 47102000 32123000 30774000 108120000 85655000 112630000 77700000 75804000 116190000 1637 404 1494 14202;14203;14204;14205;14206;14207;14208;14209;14210;14211;14212;14213;14214;14215 11355;11356;11357;11358;11359;11360;11361;11362;11363;11364;11365;11366;11367 11355 12 AETVADTRRLITK Acetyl (Protein N-term) 1514.8417 0.84165545 404 O60493 SNX3 Sorting nexin-3 yes yes 1 0 2 By MS/MS 2 0 1 1 69.77 61.485 3 0.001273 81956 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.563 37.426 18637000 18637000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1638 404 1495 14216 11368 11368 1 AETVLDLMVTNSQK Unmodified 1547.7865 0.78650834 4706 Q9NWX5 ASB6 Ankyrin repeat and SOCS box protein 6 yes yes 0 0 0 By MS/MS 2 0 2 2 87.777 82.935 2;3 0.0032676 103101 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 55.176 38.059 26691000 0 26691000 0 0 0 0 0 0 0 0 0 0 0 0 0 1639 4706 1496 14217;14218 11369;11370 11369 1 AETYDFLFK Acetyl (Protein N-term) 1174.5546 0.55464113 1827 P61018 RAB4B Ras-related protein Rab-4B yes yes 1 0 0 By MS/MS 2 0 1 1 95.98 91.159 2 0.0052233 112993 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.248 52.301 12062000 0 12062000 0 0 0 0 0 0 0 0 0 0 0 0 0 1640 1827 1497 14219 11371 11371 1 AETYDFLFK Unmodified 1132.5441 0.54407645 1827 P61018 RAB4B Ras-related protein Rab-4B yes yes 0 0 0 By MS/MS 1 0 1 1 102.8 103.69 2 0.026988 94996 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 69.176 18.472 27771000 0 27771000 0 0 0 0 0 0 0 0 0 0 0 0 0 1641 1827 1497 14220 11372 11372 1 AEVAAIYEPPQIGTQNSLELLEDPK Unmodified 2724.3858 0.38579147 3476 Q8TAT6 NPLOC4 Nuclear protein localization protein 4 homolog yes yes 0 0 0 By MS/MS 10 0 1 1 90.498 90.613 3 0.021939 105228 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 19.113 16.07 2640700 0 0 0 0 0 0 0 0 0 2640700 0 0 0 0 0 1642 3476 1498 14221 11373 11373 1 AEVATELPK Unmodified 956.51786 0.51786169 3184 Q86WJ1 CHD1L Chromodomain-helicase-DNA-binding protein 1-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 37.345 37.585 2 0.015842 41274 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 57.047 39.199 57240000 0 0 0 0 3491900 5557200 4746800 3523700 3379700 5810100 5699700 5638900 6297300 5521600 7573200 1643 3184 1499 14222;14223;14224;14225;14226;14227;14228;14229;14230;14231;14232 11374;11375;11376;11377 11375 4 AEVDAEKPGATDRK Unmodified 1485.7423 0.74233534 3679 Q92888 ARHGEF1 Rho guanine nucleotide exchange factor 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 8.9329 9.0669 3 0.0024685 5933 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 73.022 51.248 81721000 0 0 0 5554800 3982200 2430300 7881800 4081400 1352900 4629300 22663000 11156000 7331700 4122300 6536300 1644 3679 1500 14233;14234;14235;14236;14237;14238;14239;14240;14241;14242;14243;14244 11378;11379;11380;11381;11382 11379 4 AEVDMDTDAPQVSHK Unmodified 1641.7305 0.73045002 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.69 3.47 2 2 9 4 1 1 1 1 1 1 1 1 1 37.306 36.044 2;3 3.0879E-06 45754 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.18 96.346 187450000 0 102140000 0 0 0 18565000 0 5344700 5883100 7779500 7294700 12899000 5688500 7711500 14150000 1645 2392 1501 14245;14246;14247;14248;14249;14250;14251;14252;14253;14254;14255;14256;14257 11383;11384;11385;11386;11387;11388;11389;11390;11391;11392;11393;11394;11395;11396;11397;11398;11399;11400 11387 18 AEVDMDTDAPQVSHK Oxidation (M) 1657.7254 0.72536464 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 1 0 By MS/MS 3 0 1 1 25.769 21.633 3 4.1806E-05 27071 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 79.81 75.639 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1646 2392 1501 14258 11401 11401 3894 1 AEVDMDTDAPQVSHKPGGEPK Oxidation (M) 2223.0114 0.011375907 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 1 1 By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 26.507 26.642 3 3.395E-05 28066 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 49.528 40.708 26388000 0 0 0 1986400 2127100 3635700 2500500 3804500 0 0 2678500 6835900 0 2819600 0 1647 2392 1502 14259;14260;14261;14262;14263;14264;14265;14266 11402;11403;11404 11404 3894 2 AEVDMDTDAPQVSHKPGGEPK Unmodified 2207.0165 0.016461285 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 1 By MS/MS By MS/MS 2.25 0.433 3 1 1 3 42.182 36.761 3;4 6.9336E-10 48125 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.396 84.52 74124000 15334000 58791000 0 0 0 0 0 0 0 0 0 0 0 0 0 1648 2392 1502 14267;14268;14269;14270 11405;11406;11407;11408 11407 4 AEVEETLK Acetyl (Protein N-term) 959.48114 0.48114184 4542 Q9NP97;Q8TF09 DYNLRB1;DYNLRB2 Dynein light chain roadblock-type 1;Dynein light chain roadblock-type 2 yes no 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.8 3.66 1 3 11 2 1 1 1 1 1 1 1 1 1 1 1 1 1 58.429 58.89 2 0.0028324 61536 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 85.064 67.794 228750000 75730000 673970 528230 6087100 6083600 8799700 6404600 5311200 4913400 0 22158000 22443000 8512500 17567000 43536000 1649 4542 1503 14271;14272;14273;14274;14275;14276;14277;14278;14279;14280;14281;14282;14283;14284;14285 11409;11410;11411;11412;11413;11414;11415;11416;11417;11418;11419;11420 11416 11 AEVEVADELLENLAK Unmodified 1641.8461 0.84613171 3051 Q7L5D6 GET4 Golgi to ER traffic protein 4 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.38 0.484 5 3 2 5 1 96.41 92.098 2;3 7.8404E-38 114989 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 177.04 144.52 601660000 67050000 528570000 6045100 0 0 0 0 0 0 0 0 0 0 0 0 1650 3051 1504 14286;14287;14288;14289;14290;14291;14292;14293 11421;11422;11423;11424;11425;11426 11425 6 AEVGEDSGAR Acetyl (Protein N-term) 1031.452 0.45196697 2019 P85037 FOXK1 Forkhead box protein K1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 21.95 22.125 2 0.00076787 22681 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 84.213 58.386 134590000 0 0 0 16757000 18880000 19534000 0 0 0 0 24684000 25743000 28993000 0 0 1651 2019 1505 14294;14295;14296;14297;14298;14299 11427;11428;11429;11430;11431;11432 11430 6 AEVGEIIEGCR Unmodified 1231.5867 0.58668632 3697 Q92993 KAT5 Histone acetyltransferase KAT5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 8 1 1 1 1 1 1 1 1 13.403 13.563 2 0.021343 12621 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 34.253 8.21 31305000 0 0 0 2811900 0 3008800 3474500 3037700 4053900 0 4859400 0 4575700 0 5483000 1652 3697 1506 14300;14301;14302;14303;14304;14305;14306;14307 11433 11433 1 AEVGEIIEGCR Acetyl (Protein N-term) 1273.5973 0.597251 3697 Q92993 KAT5 Histone acetyltransferase KAT5 yes yes 1 0 0 By MS/MS 10 0 1 1 81.078 81.157 2 0.0087056 94211 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 60.398 54.363 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1653 3697 1506 14308 11434 11434 1 AEVIMNYHVGETVLSLQK Oxidation (M) 2046.0456 0.045576569 2528 Q15393 SF3B3 Splicing factor 3B subunit 3 yes yes 0 1 0 By MS/MS 2 0 1 1 82.325 74.195 3 2.9603E-14 97240 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 108.56 102.89 41750000 41750000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1654 2528 1507 14309 11435;11436 11436 4161 2 AEVIMNYHVGETVLSLQK Unmodified 2030.0507 0.050661947 2528 Q15393 SF3B3 Splicing factor 3B subunit 3 yes yes 0 0 0 By MS/MS 2 0 1 1 87.475 79.345 3 0.025512 103297 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 26.412 16.036 16191000 16191000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1655 2528 1507 14310 11437 11437 1 AEVIPVTLAMENTYQK Unmodified 1805.9233 0.92333617 2859 Q68DQ2 CRYBG3 Very large A-kinase anchor protein yes yes 0 0 0 By MS/MS 2 0 2 2 88.292 83.45 2;3 0.0016702 103694 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 55.975 51.073 46395000 0 46395000 0 0 0 0 0 0 0 0 0 0 0 0 0 1656 2859 1508 14311;14312 11438;11439 11438 2 AEVKFEGDTLVNRIELK Unmodified 1960.0629 0.062941193 110 CON__Q9U6Y5 yes yes 0 0 2 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 5.65 3.95 1 8 2 9 7 2 2 1 1 1 1 1 1 1 1 1 79.801 78.186 3;4 2.2636E-79 95494 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 164.69 150.75 + 1082000000 807560000 211530000 3553900 0 0 5506400 5339800 7066500 5416700 4911100 7017700 10287000 3798600 0 9996900 1657 110 1509 14313;14314;14315;14316;14317;14318;14319;14320;14321;14322;14323;14324;14325;14326;14327;14328;14329;14330;14331;14332 11440;11441;11442;11443;11444;11445;11446;11447 11443 6 AEVLQSTQR Unmodified 1030.5407 0.5407224 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 0 By MS/MS 10 0 1 1 18.192 18.168 2 0.034262 18428 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 66.621 36.367 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1658 5216 1510 14333 11448 11448 1 AEVLSEEPILK Unmodified 1226.6758 0.6758189 3043 Q7L1Q6 BZW1 Basic leucine zipper and W2 domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 67.119 66.267 2 2.7798E-06 84949 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 141.48 121.69 3553200000 79457000 2068800000 0 54912000 85011000 113200000 83220000 106640000 55721000 141980000 151700000 141570000 91998000 125250000 253780000 1659 3043 1511 14334;14335;14336;14337;14338;14339;14340;14341;14342;14343;14344;14345;14346;14347;14348 11449;11450;11451;11452;11453;11454;11455;11456;11457;11458;11459;11460;11461;11462;11463;11464;11465 11454 16 AEVLWLMGAK Unmodified 1116.6002 0.60015154 601 O94906 PRPF6 Pre-mRNA-processing factor 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 84.538 84.359 2 0.0048055 97592 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 71.501 41.316 34542000 0 0 3623500 0 0 0 0 4536000 0 3983400 2957700 5424700 3951100 2551300 7514600 1660 601 1512 14349;14350;14351;14352;14353;14354;14355;14356 11466;11467;11468;11469;11470;11471;11472;11473 11469 7 AEVPEDKPK Unmodified 1011.5237 0.52367535 686 O95757 HSPA4L Heat shock 70 kDa protein 4L yes yes 0 0 1 By matching By MS/MS By MS/MS 2 0 3 1 1 1 11.736 8.5779 2 0.02166 11601 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.51 65.813 184690000 8927100 173150000 2612900 0 0 0 0 0 0 0 0 0 0 0 0 1661 686 1513 14357;14358;14359 11474 11474 0 AEVPPGPSSLLPPPAPPAPAAVEPR Acetyl (Protein N-term) 2455.3111 0.31111039 2448 Q147X3 NAA30 N-alpha-acetyltransferase 30 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 92.262 92.325 3 2.1413E-10 107672 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 56.298 53.612 153430000 0 0 0 1597300 0 0 2052400 0 0 46053000 42350000 61377000 0 0 0 1662 2448 1514 14360;14361;14362;14363;14364 11475;11476;11477;11478 11476 4 AEVQNLGGELVVSGVDSAMSLIQAAK Oxidation (M) 2601.332 0.33198176 1340 P35221 CTNNA1 Catenin alpha-1 yes yes 0 1 0 By MS/MS 2 0 1 1 99.31 94.581 3 5.3844E-67 116982 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.04 123.76 30582000 0 30582000 0 0 0 0 0 0 0 0 0 0 0 0 0 1663 1340 1515 14365 11479;11480 11480 2024 2 AEVQNLGGELVVSGVDSAMSLIQAAK Unmodified 2585.3371 0.33706714 1340 P35221 CTNNA1 Catenin alpha-1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 102.33 98.222 3 1.4715E-107 121463 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 147.26 141.55 96019000 0 96019000 0 0 0 0 0 0 0 0 0 0 0 0 0 1664 1340 1515 14366;14367 11481;11482 11481 2 AEVQVLVLDGR Acetyl (Protein N-term) 1239.6823 0.68230126 1415 P40429 RPL13A 60S ribosomal protein L13a yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 89.085 89.237 2 0.00054072 102634 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 80.763 68.527 12199000 0 0 0 0 0 0 0 1576900 1301600 4205200 0 0 0 5115100 0 1665 1415 1516 14368;14369;14370;14371 11483;11484 11484 2 AEVRGAEIEYAMAYSK Unmodified 1786.856 0.85598488 3717 Q969H8 MYDGF Myeloid-derived growth factor yes yes 0 0 1 By MS/MS By MS/MS 2.25 0.433 3 1 3 1 71.619 65.335 2;3 5.9257E-05 86635 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.97 69.912 125200000 106730000 0 18473000 0 0 0 0 0 0 0 0 0 0 0 0 1666 3717 1517 14372;14373;14374;14375 11485;11486;11487;11488 11487 3 AEVRGAEIEYAMAYSK Oxidation (M) 1802.8509 0.85089951 3717 Q969H8 MYDGF Myeloid-derived growth factor yes yes 0 1 1 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 57.768 51.221 3 0.0086118 69151 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.059 36.479 32970000 15231000 17740000 0 0 0 0 0 0 0 0 0 0 0 0 0 1667 3717 1517 14376;14377 11489;11490 11490 5294 2 AEVSIDQSK Acetyl (Protein N-term) 1017.4979 0.49785453 3230 Q8IVM0 CCDC50 Coiled-coil domain-containing protein 50 yes yes 1 0 0 By MS/MS 1 0 1 1 101.51 106.77 2 0.0090674 86388 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 61.679 51.6 7144200 7144200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1668 3230 1518 14378 11491 11491 1 AEVSIQNNK Unmodified 1001.5142 0.5141733 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8 3.46 2 6 1 1 2 1 1 1 1 16.643 15.767 2 0.018695 14397 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 54.611 19.362 92186000 9741000 44198000 0 0 4041800 0 0 0 0 4322300 3763700 0 0 8810000 17309000 1669 487 1519 14379;14380;14381;14382;14383;14384;14385;14386 11492;11493;11494;11495;11496;11497 11496 6 AEVTAPDVEVSLPSVEVDVEAPRAK Unmodified 2606.3439 0.34392666 3226 Q8IVF2 AHNAK2 Protein AHNAK2 yes yes 0 0 1 By MS/MS 2 0 1 1 89.247 81.116 3 0.00067434 105509 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 39.506 33.54 5433600 5433600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1670 3226 1520 14387 11498 11498 1 AEVTAPDVK Unmodified 928.48656 0.48656157 3226 Q8IVF2 AHNAK2 Protein AHNAK2 yes no 0 0 0 By MS/MS 10 0 1 1 28.133 28.269 2 0.044017 30313 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 60.074 36.765 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1671 3226 1521 14388 11499 11499 1 AEVTEEVEDGKEEDEEEETENSLPIPASK Unmodified 3231.4314 0.43141686 4365 Q9H2G2 SLK STE20-like serine/threonine-protein kinase yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 72.765 67.729 3 6.4099E-48 85718 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.39 110.23 62311000 0 62311000 0 0 0 0 0 0 0 0 0 0 0 0 0 1672 4365 1522 14389;14390 11500;11501 11500 2 AEVTEMPNSDSLPEDAEVHCDSAAVSHEPTPADPR Unmodified 3759.6265 0.62646182 3239 Q8IWE2 FAM114A1 Protein NOXP20 yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 66.861 67.094 4 5.9324E-14 76380 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.129 34.586 36112000 0 0 0 0 0 3832200 0 3678900 0 6265800 0 4479600 0 4512600 13343000 1673 3239 1523 14391;14392;14393;14394;14395;14396 11502;11503;11504;11505 11503 4 AEVTLDGVWPTDK Unmodified 1429.7089 0.70890994 1707 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.114 78.175 2 4.567E-75 90400 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 192.44 174.13 424760000 0 0 0 12601000 24356000 29506000 26723000 37012000 33682000 49501000 33205000 51657000 31898000 37828000 56788000 1674 1707 1524 14397;14398;14399;14400;14401;14402;14403;14404;14405;14406;14407;14408 11506;11507;11508;11509;11510;11511;11512;11513;11514;11515;11516;11517 11514 7 AEVTMGDPHQQTLAR Unmodified 1652.7941 0.79405333 2343 Q13769 THOC5 THO complex subunit 5 homolog yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 37.189 37.438 2;3 1.3356E-09 40303 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.937 78.981 172200000 0 0 0 0 45594000 57406000 0 2056400 48530000 2808800 2935800 5188200 0 2260500 5415500 1675 2343 1525 14409;14410;14411;14412;14413;14414;14415;14416;14417 11518;11519;11520 11519 2 AEVTPSQHGNR Unmodified 1194.5741 0.5741478 2374 Q14145 KEAP1 Kelch-like ECH-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 6.3717 6.5494 3 0.013773 4701 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 42.21 24.314 16073000 0 0 0 2126600 0 0 0 1398200 0 0 2704800 2496600 2045600 1694100 3606800 1676 2374 1526 14418;14419;14420;14421;14422;14423;14424 11521;11522;11523;11524 11522 4 AEVVDEIAAK Unmodified 1043.5499 0.5498901 3476 Q8TAT6 NPLOC4 Nuclear protein localization protein 4 homolog yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 43.297 42.816 2 0.0066055 46831 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 64.485 33.923 152680000 7492100 0 0 10217000 6794800 0 10863000 7525300 10758000 13294000 19532000 13565000 13372000 15670000 23597000 1677 3476 1527 14425;14426;14427;14428;14429;14430;14431;14432;14433;14434;14435;14436 11525;11526;11527;11528;11529 11529 4 AEVVGKPSPEFFK Unmodified 1433.7555 0.7554662 4312 Q9H008 LHPP Phospholysine phosphohistidine inorganic pyrophosphate phosphatase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 66.137 60.463 3 0.00079456 74502 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 89.013 81.974 105110000 9397800 57840000 37874000 0 0 0 0 0 0 0 0 0 0 0 0 1678 4312 1528 14437;14438;14439;14440 11530;11531;11532 11532 3 AEVVLGNIIK Unmodified 1054.6386 0.63864553 2266 Q13303 KCNAB2 Voltage-gated potassium channel subunit beta-2 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 79.611 76.043 2 0.010658 91103 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 74.127 49.973 85544000 0 82582000 2961700 0 0 0 0 0 0 0 0 0 0 0 0 1679 2266 1529 14441;14442;14443 11533;11534;11535 11534 3 AEVVQVIRNPAK Unmodified 1322.767 0.76703394 4416 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 yes yes 0 0 1 By MS/MS By MS/MS By matching 10 0 3 1 1 1 42.714 43.07 3 0.03777 47273 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 31.462 23.852 18053000 0 0 0 0 0 0 5879000 0 0 0 0 0 0 3465500 8708900 1680 4416 1530 14444;14445;14446 11536 11536 1 AEVVSLLLDRK Unmodified 1241.7343 0.73433683 3250 Q8IWZ3 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 75.178 75.344 3 0.0033873 86302 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.448 40.935 37933000 0 0 0 0 0 3377900 2914900 3694300 3034600 4364200 3878100 4371200 0 3039100 9259000 1681 3250 1531 14447;14448;14449;14450;14451;14452;14453;14454;14455 11537;11538;11539;11540;11541 11538 5 AEWPSETPVLCQQCGGK Unmodified 1945.8662 0.866232 4287 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 73.209 68.368 2 8.5354E-13 86300 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.33 116.72 32742000 0 32742000 0 0 0 0 0 0 0 0 0 0 0 0 0 1682 4287 1532 14456;14457 11542;11543 11542 2 AEYEALAEQNRR Unmodified 1448.7008 0.70080487 101 CON__Q7Z3Z0;CON__Q7Z3Y8;Q7Z3Z0;Q7Z3Y8 KRT25;KRT27 Keratin, type I cytoskeletal 25;Keratin, type I cytoskeletal 27 yes no 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 31.673 32.075 3 0.0068486 34723 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 40.066 29.713 + 25306000 0 0 0 0 0 0 0 0 0 0 7962900 0 17343000 0 0 1683 101 1533 14458;14459 11544 11544 1 AEYEGDGIPTVFVAVAGR Unmodified 1849.921 0.92102798 1135 P22234 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 20 1 1 2 1 2 2 2 2 2 1 2 2 88.499 88.598 2;3 1.37E-71 102795 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 172.76 164.35 230930000 0 0 0 1916500 4702000 13100000 4375800 9937600 10230000 29474000 35035000 28323000 3024400 15991000 74819000 1684 1135 1534 14460;14461;14462;14463;14464;14465;14466;14467;14468;14469;14470;14471;14472;14473;14474;14475;14476;14477;14478;14479 11545;11546;11547;11548;11549;11550;11551;11552;11553;11554;11555 11551 10 AEYGTLLQDLTNNITLEDLEQLK Acetyl (Protein N-term) 2675.3542 0.35415699 2498 Q15121 PEA15 Astrocytic phosphoprotein PEA-15 yes yes 1 0 0 By MS/MS 2 0 1 1 104.06 95.932 3 2.6011E-15 123236 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.873 82.513 9977800 9977800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1685 2498 1535 14480 11556 11556 1 AEYISLAEHEAK Unmodified 1359.667 0.66704513 4264 Q9BZF9 UACA Uveal autoantigen with coiled-coil domains and ankyrin repeats yes yes 0 0 0 By MS/MS 2 0 1 1 52.976 49.064 3 0.0014132 61541 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 71.176 58.907 13208000 0 0 13208000 0 0 0 0 0 0 0 0 0 0 0 0 1686 4264 1536 14481 11557;11558 11558 2 AEYLASIFGTEK Acetyl (Protein N-term) 1369.6765 0.67654718 909 P0DN76;Q01081;Q8WU68 U2AF1;U2AF1L4 Splicing factor U2AF 35 kDa subunit;Splicing factor U2AF 26 kDa subunit yes no 1 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS 6.55 3.8 3 2 6 2 2 1 1 1 1 1 1 1 99.762 97.588 2 7.3371E-15 118976 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 157.75 135.66 964470000 17993000 841000000 4508600 0 17428000 0 0 16138000 0 0 34437000 24848000 8126700 0 0 1687 909 1537 14482;14483;14484;14485;14486;14487;14488;14489;14490;14491;14492 11559;11560;11561;11562;11563;11564;11565;11566 11559 8 AEYLCRIGDK Unmodified 1223.5969 0.59685707 2471 Q15008 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 41.724 36.535 3 0.0019254 46075 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 91.658 66.82 161690000 79050000 0 82636000 0 0 0 0 0 0 0 0 0 0 0 0 1688 2471 1538 14493;14494 11567;11568 11568 1 AFAAGADIK Unmodified 862.45487 0.45486751 1267 P30084 ECHS1 Enoyl-CoA hydratase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 40.238 34.391 2 0.016914 44933 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.474 37.972 332170000 35781000 296390000 0 0 0 0 0 0 0 0 0 0 0 0 0 1689 1267 1539 14495;14496 11569;11570;11571 11569 3 AFAAQEDLEK Unmodified 1120.5401 0.5400537 1345 P35241 RDX Radixin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.65 3.65 5 12 1 2 2 1 1 1 1 1 1 1 1 1 1 1 1 40.691 39.376 2 1.0476E-10 49528 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 168.27 138.85 3352000000 98361000 3002500000 14882000 3606000 3836000 5010900 7044200 4359500 3900100 7206800 42227000 32655000 10552000 24334000 91574000 1690 1345 1540 14497;14498;14499;14500;14501;14502;14503;14504;14505;14506;14507;14508;14509;14510;14511;14512;14513 11572;11573;11574;11575;11576;11577;11578;11579;11580;11581;11582;11583;11584 11575 12 AFAAVPTSHPPEDAPAQPPTPGPAASPEQLSFR Unmodified 3337.6368 0.63675464 2381 Q14160 SCRIB Protein scribble homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.313 79.36 3 1.7598E-57 91526 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.866 80.265 131190000 0 0 0 2668000 6948200 11902000 6297800 0 10007000 18430000 14832000 19970000 12531000 7947700 19651000 1691 2381 1541 14514;14515;14516;14517;14518;14519;14520;14521;14522;14523;14524 11585;11586;11587;11588;11589;11590;11591;11592;11593;11594;11595;11596;11597;11598 11589 14 AFADAMEVIPSTLAENAGLNPISTVTELR Oxidation (M) 3045.5329 0.53286642 1642 P50991 CCT4 T-complex protein 1 subunit delta yes yes 0 1 0 By MS/MS 10 0 1 1 96.655 96.773 3 2.424E-09 112559 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 43.291 40.533 3681800 0 0 0 0 0 0 0 0 0 3681800 0 0 0 0 0 1692 1642 1542 14525 11599 11599 2642 1 AFADPEVLR Unmodified 1016.5291 0.52909508 472;3250 Q8IWZ3;O75179 ANKHD1;ANKRD17 Ankyrin repeat and KH domain-containing protein 1;Ankyrin repeat domain-containing protein 17 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 58.077 58.359 2 0.0030604 65689 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 91.853 67.898 112990000 0 0 0 0 0 12288000 0 0 12477000 18667000 0 26461000 0 18895000 24201000 1693 3250;472 1543 14526;14527;14528;14529;14530;14531 11600;11601;11602;11603;11604;11605 11604 6 AFADPEVLRR Unmodified 1172.6302 0.63020611 472;3250 Q8IWZ3;O75179 ANKHD1;ANKRD17 Ankyrin repeat and KH domain-containing protein 1;Ankyrin repeat domain-containing protein 17 no no 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.712 49.868 3 0.0005087 56148 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 90.108 71.363 324840000 0 0 0 16362000 17356000 21453000 22183000 25822000 20355000 27678000 31461000 35708000 35087000 25019000 46357000 1694 3250;472 1544 14532;14533;14534;14535;14536;14537;14538;14539;14540;14541;14542;14543 11606;11607;11608;11609;11610;11611;11612;11613;11614;11615;11616;11617 11611 12 AFAETHIK Unmodified 915.48142 0.48141661 1464 P42704 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.36 3.15 2 1 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21.878 21.11 2 0.0059379 30223 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 117.16 83.802 265360000 78105000 8397100 87141000 6508600 4373500 11306000 5911700 3301500 2627300 8555600 11486000 0 8809800 9263500 19572000 1695 1464 1545 14544;14545;14546;14547;14548;14549;14550;14551;14552;14553;14554;14555;14556;14557 11618;11619;11620;11621;11622;11623;11624;11625;11626;11627 11622 9 AFAGPLSPAK Unmodified 957.52837 0.5283668 3197 Q86XL3 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 47.507 47.613 2 0.039039 54186 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 40.352 29.524 10440000 0 0 0 0 2639100 0 2503300 0 1489300 0 0 0 0 0 3808100 1696 3197 1546 14558;14559;14560;14561 11628 11628 1 AFAHDAGGLPSGTGGLVK Unmodified 1653.8475 0.84746911 2966 Q6R327 RICTOR Rapamycin-insensitive companion of mTOR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 59.327 58.492 3 0.00029131 66754 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 40.962 26.609 126700000 6502600 0 3014400 9168000 7564300 9943600 6341100 8591900 0 11771000 13463000 15253000 10125000 9893700 15067000 1697 2966 1547 14562;14563;14564;14565;14566;14567;14568;14569;14570;14571;14572;14573;14574 11629;11630;11631;11632;11633;11634;11635;11636 11635 8 AFAHITGGGLLENIPR Unmodified 1664.8998 0.89983903 1134 P22102 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes yes 0 0 0 By MS/MS 10 0 1 1 79.722 79.952 3 9.7072E-08 92016 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.92 56.783 10875000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10875000 1698 1134 1548 14575 11637 11637 1 AFALEVIK Unmodified 889.5273 0.52730417 4374 Q9H2U2 PPA2 Inorganic pyrophosphatase 2, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 80.19 75.034 2 0.02908 96570 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.058 44.587 182100000 92679000 23913000 65507000 0 0 0 0 0 0 0 0 0 0 0 0 1699 4374 1549 14576;14577;14578 11638;11639;11640 11639 3 AFALGILK Unmodified 831.52182 0.52182486 2831 Q5VZE5 NAA35 N-alpha-acetyltransferase 35, NatC auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.03 80.088 2 0.012144 92473 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 75.311 58.384 184420000 0 0 0 3827300 6976800 9423800 2095700 3388400 3004400 42130000 34900000 73569000 1344200 1736100 2028900 1700 2831 1550 14579;14580;14581;14582;14583;14584;14585;14586;14587;14588;14589;14590 11641;11642;11643;11644;11645 11643 5 AFALNDLDDYEK Unmodified 1412.646 0.64597533 2384 Q14166 TTLL12 Tubulin--tyrosine ligase-like protein 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 77.327 77.305 2 2.7405E-05 88899 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.015 81.808 25806000 0 0 0 2426100 0 4885700 0 0 0 0 0 0 0 4301400 14193000 1701 2384 1551 14591;14592;14593;14594;14595 11646;11647;11648;11649;11650 11647 5 AFAMIIDK Oxidation (M) 923.47864 0.47863942 2521;2520 Q15365;Q15366 PCBP1;PCBP2 Poly(rC)-binding protein 1;Poly(rC)-binding protein 2 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.7 2.91 4 1 25 2 2 1 1 2 1 3 2 2 3 3 2 2 1 3 52.65 52.002 1;2 0.004459 57645 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 97.798 56.296 4299200000 169650000 733640000 196470000 100140000 93197000 359220000 335600000 234590000 373770000 262080000 184800000 236110000 337840000 164550000 517590000 1702 2520;2521 1552 14596;14597;14598;14599;14600;14601;14602;14603;14604;14605;14606;14607;14608;14609;14610;14611;14612;14613;14614;14615;14616;14617;14618;14619;14620;14621;14622;14623;14624;14625 11651;11652;11653;11654;11655;11656;11657;11658;11659;11660;11661;11662;11663;11664;11665;11666;11667;11668;11669;11670;11671;11672;11673;11674;11675;11676;11677;11678;11679;11680;11681;11682;11683 11677 4143 33 AFAMIIDK Unmodified 907.48372 0.48372479 2521;2520 Q15365;Q15366 PCBP1;PCBP2 Poly(rC)-binding protein 1;Poly(rC)-binding protein 2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 66.996 67.082 2 0.012186 75902 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 75.213 57.942 1842700000 0 0 0 134030000 0 330740000 188240000 0 0 243040000 279550000 0 0 196270000 470840000 1703 2520;2521 1552 14626;14627;14628;14629;14630;14631;14632 11684;11685;11686;11687;11688;11689;11690;11691 11690 8 AFAMTNQILVEK Oxidation (M) 1379.7119 0.71188683 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.56 3.86 3 1 5 1 2 1 1 1 1 1 1 62.323 60.009 2 2.5833E-14 77137 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.49 129.32 244070000 16885000 192140000 2607500 0 0 0 0 0 0 0 5437400 7131300 4859700 4755300 10249000 1704 1300 1553 14633;14634;14635;14636;14637;14638;14639;14640;14641 11692;11693;11694;11695;11696 11693 1916 5 AFAMTNQILVEK Unmodified 1363.717 0.71697221 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 79.685 74.265 2 0.0015343 95297 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.22 92.628 227180000 59659000 167520000 0 0 0 0 0 0 0 0 0 0 0 0 0 1705 1300 1553 14642;14643;14644 11697;11698;11699 11699 3 AFANLRK Acetyl (Protein N-term) 860.48684 0.48683634 304 O43175 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.107 46.276 2 0.015541 51989 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 114.67 71.949 4804600000 0 0 0 233700000 245650000 601360000 360600000 352420000 299680000 522610000 416970000 450100000 364220000 326300000 630960000 1706 304 1554 14645;14646;14647;14648;14649;14650;14651;14652;14653;14654;14655;14656 11700;11701;11702;11703;11704;11705;11706;11707;11708;11709;11710;11711 11701 12 AFASATNYK Unmodified 971.47125 0.47124585 1698 P52747 ZNF143 Zinc finger protein 143 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 26.737 26.873 2 0.03575 28987 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 45.972 31.976 31931000 0 0 0 0 2367600 4019200 2217800 0 0 6747300 6276900 0 5708500 4593500 0 1707 1698 1555 14657;14658;14659;14660;14661;14662;14663 11712 11712 1 AFATGYGLK Unmodified 926.48617 0.48616764 1698 P52747;P36508 ZNF143;ZNF76 Zinc finger protein 143;Zinc finger protein 76 yes no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 48.405 48.474 2 0.011542 54607 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 62.659 39.622 99429000 0 0 0 6993200 6651400 9952800 7965400 8354500 0 12761000 0 18866000 16761000 11124000 0 1708 1698 1556 14664;14665;14666;14667;14668;14669;14670;14671;14672 11713;11714;11715;11716;11717;11718;11719 11714 7 AFAVGVQQVLLK Unmodified 1271.7602 0.76015765 649 O95373 IPO7 Importin-7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 83.434 82.316 2 1.663E-09 103283 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.96 112 849790000 240360000 95140000 15469000 11000000 17153000 71510000 25679000 27564000 24904000 57686000 34936000 45345000 21737000 47886000 113430000 1709 649 1557 14673;14674;14675;14676;14677;14678;14679;14680;14681;14682;14683;14684;14685;14686;14687;14688;14689 11720;11721;11722;11723;11724;11725;11726;11727;11728;11729;11730;11731;11732;11733;11734;11735;11736;11737 11723 18 AFCADQLDVFLQK Unmodified 1553.7548 0.75481428 4822 Q9P2N5 RBM27 RNA-binding protein 27 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 87.666 87.804 2 0.00017133 101611 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.862 68.232 16144000 0 0 0 0 0 0 0 1053200 1993000 3433800 0 2000700 1183300 1676500 4803600 1710 4822 1558 14690;14691;14692;14693;14694;14695;14696 11738;11739;11740 11739 3 AFCAENLEEK Unmodified 1209.5336 0.53358811 1571 P49407 ARRB1 Beta-arrestin-1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 47.292 42.082 2 0.026114 54672 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.717 29.98 165630000 0 165630000 0 0 0 0 0 0 0 0 0 0 0 0 0 1711 1571 1559 14697;14698 11741 11741 1 AFCEPGNVENNGVLSFIK Unmodified 1993.9568 0.95676156 1740 P54577 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.78 3.79 3 2 4 4 1 1 1 1 1 89.351 87.337 2;3 1.7196E-05 100830 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.617 80.277 222190000 0 202000000 5293300 0 0 0 0 0 0 2092500 2184400 0 0 1556100 9065200 1712 1740 1560 14699;14700;14701;14702;14703;14704;14705;14706;14707 11742;11743;11744;11745;11746 11743 4 AFDCPETEYPVK Unmodified 1454.6388 0.63878147 375 O43847 NRD1 Nardilysin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 57.67 52.986 2 0.0013438 62448 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 68.657 58.425 985970000 14831000 955860000 1720900 13561000 0 0 0 0 0 0 0 0 0 0 0 1713 375 1561 14708;14709;14710;14711;14712;14713;14714;14715;14716;14717;14718;14719;14720;14721 11747;11748;11749;11750;11751;11752;11753;11754;11755;11756;11757;11758;11759;11760 11759 14 AFDDVPVVQIYSSR Unmodified 1594.7991 0.79912193 3094 Q7Z460 CLASP1 CLIP-associating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 82.62 82.758 2 6.5519E-13 95794 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 109.24 91.372 52027000 0 0 0 0 0 0 0 0 0 7940100 6162600 8591400 6666800 9333300 13332000 1714 3094 1562 14722;14723;14724;14725;14726;14727 11761;11762;11763;11764;11765;11766 11761 6 AFDGAGSSLGR Unmodified 1036.4938 0.49377221 3542 Q8WUF5 PPP1R13L RelA-associated inhibitor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.986 34.169 2 0.0079576 37636 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 52.725 16.024 370300000 0 0 0 23837000 22019000 18494000 24908000 24114000 21785000 33783000 44793000 41461000 45599000 26162000 43340000 1715 3542 1563 14728;14729;14730;14731;14732;14733;14734;14735;14736;14737;14738;14739 11767;11768;11769;11770;11771;11772;11773;11774;11775;11776;11777;11778;11779 11768 9 AFDIIER Unmodified 862.45487 0.45486751 3311 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 57.081 57.201 2 0.027176 64162 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 77.741 42.848 235740000 0 0 0 10888000 11447000 19055000 17020000 17486000 9991600 21508000 24810000 28609000 18821000 21929000 34177000 1716 3311 1564 14740;14741;14742;14743;14744;14745;14746;14747;14748;14749;14750;14751 11780 11780 1 AFDLFNPNFK Unmodified 1211.5975 0.597509 5163 Q9Y3D9 MRPS23 28S ribosomal protein S23, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 85.206 85.323 2 0.0037427 99032 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 75.38 67.689 27221000 0 0 0 0 0 3171000 0 0 2342700 3139200 0 3710500 3272600 3361400 8224000 1717 5163 1565 14752;14753;14754;14755;14756;14757;14758;14759 11781;11782;11783;11784;11785;11786;11787;11788;11789 11789 8 AFDLTEQR Unmodified 978.47706 0.47705951 3148 Q86UE8 TLK2 Serine/threonine-protein kinase tousled-like 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 42.699 42.928 2 0.025333 47892 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 58.782 31.645 39126000 0 0 0 0 2223700 0 0 3606700 0 4173600 10731000 0 6139800 0 12251000 1718 3148 1566 14760;14761;14762;14763;14764;14765 11790 11790 1 AFDLVPPEAVPEQK Unmodified 1538.7981 0.7980593 3844 Q96G03 PGM2 Phosphoglucomutase-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 5.4 3.77 2 1 2 3 1 1 81.601 79.13 2;3 0.00069293 98066 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 49.216 42.53 659520000 0 635300000 0 0 0 0 0 0 0 0 0 0 0 6563400 17654000 1719 3844 1567 14766;14767;14768;14769;14770 11791;11792;11793;11794 11791 2 AFDLVPPEAVPEQKDPDPEFPTVK Unmodified 2664.3323 0.33229934 3844 Q96G03 PGM2 Phosphoglucomutase-2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 4 3.03 2 2 1 3 1 1 88.122 85.407 3 4.9256E-19 106497 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.827 60.467 155300000 0 139750000 6814000 0 0 0 0 0 0 0 0 0 0 0 8731800 1720 3844 1568 14771;14772;14773;14774;14775 11795;11796;11797;11798;11799;11800;11801;11802 11796 8 AFDLYEQRYAAVK Unmodified 1572.7936 0.79364262 4967 Q9UKI8 TLK1 Serine/threonine-protein kinase tousled-like 1 yes yes 0 0 1 By MS/MS 2 0 1 1 73.765 65.569 3 0.036374 86824 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 35.803 16.225 6797000 6797000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1721 4967 1569 14776 11803 11803 1 AFDQDGDGHITVDELR Unmodified 1786.8122 0.81220581 4781 Q9NZT1 CALML5 Calmodulin-like protein 5 yes yes 0 0 0 By MS/MS By matching By matching By matching 10 0 4 1 1 1 1 61.216 61.096 3 0.012453 70652 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 43.557 31.411 13806000 0 0 0 6778000 1318900 0 0 0 0 2058900 0 0 0 0 3650600 1722 4781 1570 14777;14778;14779;14780 11804 11804 0 AFDQDGDGHITVDELRR Unmodified 1942.9133 0.91331684 4781 Q9NZT1 CALML5 Calmodulin-like protein 5 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 2 2 1 1 2 1 2 1 54.845 54.859 3;4 0.0016597 62929 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 58.83 54.728 149170000 0 0 0 76438000 7673300 11907000 3984700 10902000 10516000 0 0 18384000 0 0 9362800 1723 4781 1571 14781;14782;14783;14784;14785;14786;14787;14788;14789;14790;14791;14792 11805;11806;11807;11808;11809 11809 4 AFDRHCNMVLENVK Unmodified 1731.8185 0.81849394 1894 P62316 SNRPD2 Small nuclear ribonucleoprotein Sm D2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 2 2 1 2 48.753 48.283 3;4 0.00016509 53342 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 63.134 47.369 141530000 9344400 0 0 0 0 0 0 0 5243500 0 0 35385000 24282000 9276500 58003000 1724 1894 1572 14793;14794;14795;14796;14797;14798;14799;14800;14801 11810;11811;11812;11813;11814;11815;11816 11815 5 AFDSGIIPMEFVNK Oxidation (M) 1582.7701 0.77012999 1714 P53396 ACLY ATP-citrate synthase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.48 3.68 7 1 17 2 4 2 1 2 1 1 2 4 2 1 1 1 1 83.307 82.374 2 5.2607E-30 101751 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145.28 126.94 10303000000 43995000 1837400000 65239000 136660000 521590000 612490000 1482700000 1990100000 1826600000 490260000 484460000 753410000 19553000 39117000 0 1725 1714 1573 14802;14803;14804;14805;14806;14807;14808;14809;14810;14811;14812;14813;14814;14815;14816;14817;14818;14819;14820;14821;14822;14823;14824;14825;14826 11817;11818;11819;11820;11821;11822;11823;11824;11825;11826;11827;11828;11829;11830;11831;11832;11833;11834;11835;11836;11837 11820 2769 21 AFDSGIIPMEFVNK Unmodified 1566.7752 0.77521537 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.58 3.64 7 1 18 1 6 1 1 1 2 1 2 2 2 2 2 1 2 90.399 89.139 2;3 1.0412E-13 103210 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 113.22 97.335 2914700000 44560000 1821900000 28301000 6473500 46037000 54072000 88756000 371980000 191330000 68859000 60932000 82217000 0 6048700 43162000 1726 1714 1573 14827;14828;14829;14830;14831;14832;14833;14834;14835;14836;14837;14838;14839;14840;14841;14842;14843;14844;14845;14846;14847;14848;14849;14850;14851;14852 11838;11839;11840;11841;11842;11843;11844;11845;11846;11847;11848;11849;11850;11851;11852;11853;11854;11855;11856;11857;11858;11859;11860;11861 11860 22 AFDSGQNLSPDR Unmodified 1305.5949 0.59494282 150 O00418 EEF2K Eukaryotic elongation factor 2 kinase yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 36.204 36.593 2 0.0033507 39403 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.977 51.274 9483400 0 0 0 0 0 0 0 0 1549100 0 0 0 0 3435400 4498900 1727 150 1574 14853;14854;14855 11862;11863;11864 11862 3 AFDTAGNGYCR Unmodified 1230.5088 0.50877035 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.012 30.204 2 1.0587E-05 32714 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 138.54 134.61 108490000 0 0 0 4670900 4675200 9369800 5011900 4596200 3017400 6799800 9706500 10410000 11664000 14164000 24401000 1728 1565 1575 14856;14857;14858;14859;14860;14861;14862;14863;14864;14865;14866;14867 11865;11866;11867;11868;11869;11870;11871;11872;11873;11874;11875 11866 11 AFDTQLVER Unmodified 1077.5455 0.54547343 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.565 52.708 2 0.0029087 59776 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 124.98 90.777 314910000 0 0 0 18619000 16561000 23533000 25525000 17971000 21238000 26997000 23650000 43221000 28237000 30293000 39068000 1729 4139 1576 14868;14869;14870;14871;14872;14873;14874;14875;14876;14877;14878;14879 11876;11877;11878;11879;11880;11881;11882;11883 11877 6 AFEAVDK Unmodified 778.38612 0.38611924 562 O75937 DNAJC8 DnaJ homolog subfamily C member 8 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 23.211 18.711 2 0.03416 24839 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.265 24.907 629520000 12872000 616640000 0 0 0 0 0 0 0 0 0 0 0 0 0 1730 562 1577 14880;14881 11884 11884 1 AFEDDAIQLVAR Unmodified 1346.683 0.68302954 2282 Q13415 ORC1 Origin recognition complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 78.991 79.022 2 7.5536E-05 91226 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 89.247 78.418 21745000 0 0 0 0 2475600 5416000 3636600 3379000 0 6837400 0 0 0 0 0 1731 2282 1578 14882;14883;14884;14885;14886 11885;11886;11887;11888;11889 11888 5 AFEDDAIQLVARK Unmodified 1474.778 0.77799256 2282 Q13415 ORC1 Origin recognition complex subunit 1 yes yes 0 0 1 By MS/MS 2 0 1 1 76.7 73.947 3 0.0098332 90014 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 43.544 37.066 2797900 0 0 2797900 0 0 0 0 0 0 0 0 0 0 0 0 1732 2282 1579 14887 11890 11890 1 AFEDEMK Oxidation (M) 884.35858 0.35858386 5280 Q9Y6E2 BZW2 Basic leucine zipper and W2 domain-containing protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 10.772 10.869 2 0.028997 8397 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 66.993 63.14 114780000 0 0 0 7248000 6850400 13567000 12660000 8348500 8477600 15687000 0 0 13308000 11797000 16840000 1733 5280 1580 14888;14889;14890;14891;14892;14893;14894;14895;14896;14897 11891;11892;11893;11894;11895;11896;11897;11898 11895 8 AFEDEMK Unmodified 868.36367 0.36366924 5280 Q9Y6E2 BZW2 Basic leucine zipper and W2 domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.252 27.45 2 0.044016 29195 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 66.993 53.786 345300000 0 0 0 13975000 18490000 35998000 17947000 27226000 17542000 37140000 37916000 26952000 26395000 27794000 57921000 1734 5280 1580 14898;14899;14900;14901;14902;14903;14904;14905;14906;14907;14908;14909 11899 11899 1 AFEDEMKK Oxidation (M) 1012.4535 0.45354688 5280 Q9Y6E2 BZW2 Basic leucine zipper and W2 domain-containing protein 2 yes yes 0 1 1 By MS/MS 3 0 1 1 8.6804 5.322 2 0.044728 7186 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 67.032 62.437 5194300 0 5194300 0 0 0 0 0 0 0 0 0 0 0 0 0 1735 5280 1581 14910 11900 11900 0 AFEDTLQLMER Unmodified 1351.6442 0.6442012 624 O95163 IKBKAP Elongator complex protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.121 79.18 2 2.0005E-05 91089 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 130.66 107.58 88943000 0 0 0 2195300 3948200 7522800 4053100 10438000 5440000 6768200 8643100 10429000 6355500 7069400 16080000 1736 624 1582 14911;14912;14913;14914;14915;14916;14917;14918;14919;14920;14921;14922 11901;11902;11903;11904;11905;11906;11907;11908;11909;11910;11911 11904 11 AFEEAEK Unmodified 822.37595 0.37594848 1755 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 4.5 3.91 1 3 2 2 1 1 1 1 28.242 27.656 2 0.03326 9592 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 72.138 49.516 2175700000 220430000 1886900000 14317000 0 0 0 0 0 0 0 18277000 0 0 0 35816000 1737 1755 1583 14923;14924;14925;14926;14927;14928 11912;11913;11914 11913 3 AFEEDIETPPTR Unmodified 1403.6569 0.65687437 4814 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 54.119 54.165 2 1.2818E-08 62340 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 137.98 108.5 223530000 0 0 0 18402000 21091000 16248000 21282000 23464000 0 28277000 0 37643000 36749000 20378000 0 1738 4814 1584 14929;14930;14931;14932;14933;14934;14935;14936;14937;14938;14939 11915;11916;11917;11918;11919;11920;11921;11922;11923;11924;11925;11926;11927 11925 13 AFEEEQNLR Unmodified 1134.5306 0.53055165 1323 P32754 HPD 4-hydroxyphenylpyruvate dioxygenase yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.634 33.817 2 6.2019E-09 35963 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 162.5 114.66 453800000 0 0 0 7282300 7765300 10044000 7749500 6828200 5090700 11152000 92141000 78145000 12418000 49739000 165440000 1739 1323 1585 14940;14941;14942;14943;14944;14945;14946;14947;14948;14949;14950;14951 11928;11929;11930;11931;11932;11933;11934;11935;11936 11934 8 AFEEEQNLRGNLTNMETNGVVPGM 2 Oxidation (M) 2681.2061 0.20612932 1323 P32754 HPD 4-hydroxyphenylpyruvate dioxygenase yes yes 0 2 1 By MS/MS By MS/MS By MS/MS By MS/MS 4.11 3.18 4 3 2 5 2 1 1 73.792 70.877 2;3 2.2361E-45 85304 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 121.63 114.98 553390000 0 500890000 35249000 0 0 0 0 0 0 0 0 0 0 5103800 12150000 1740 1323 1586 14952;14953;14954;14955;14956;14957;14958;14959;14960 11937;11938;11939;11940;11941;11942;11943 11940 1966;1967 6 AFEEEQNLRGNLTNMETNGVVPGM Oxidation (M) 2665.2112 0.2112147 1323 P32754 HPD 4-hydroxyphenylpyruvate dioxygenase yes yes 0 1 1 By MS/MS By MS/MS 2.29 0.452 5 2 6 1 81.424 77.427 2;3 1.1921E-56 95618 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.67 113.16 890430000 0 875730000 14702000 0 0 0 0 0 0 0 0 0 0 0 0 1741 1323 1586 14961;14962;14963;14964;14965;14966;14967 11944;11945;11946;11947;11948;11949 11944 1966;1967 5 AFEEEQNLRGNLTNMETNGVVPGM Unmodified 2649.2163 0.21630008 1323 P32754 HPD 4-hydroxyphenylpyruvate dioxygenase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 1 3 2 87.084 82.767 2;3 1.6196E-24 103367 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.32 97.964 929830000 16645000 902430000 10759000 0 0 0 0 0 0 0 0 0 0 0 0 1742 1323 1586 14968;14969;14970;14971;14972;14973 11950;11951;11952;11953 11950 4 AFEELLVTK Unmodified 1048.5805 0.58046195 2763 Q5SXM2 SNAPC4 snRNA-activating protein complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 71.627 71.814 2 0.016766 83095 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 56.258 19.863 44871000 0 0 0 0 0 5964400 0 0 4326400 6130800 5756000 7229300 5242400 4369600 5851700 1743 2763 1587 14974;14975;14976;14977;14978;14979;14980;14981 11954;11955;11956;11957;11958 11958 4 AFEGAITK Unmodified 835.44397 0.44396847 488 O75376 NCOR1 Nuclear receptor corepressor 1 yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 29.258 29.504 2 0.040979 31358 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 50.127 7.003 72790000 0 0 0 4619600 0 5204400 5838800 0 5247200 6660800 7602000 9594300 11354000 0 16669000 1744 488 1588 14982;14983;14984;14985;14986;14987;14988;14989;14990 11959;11960;11961 11960 3 AFEHLQQLELIK Unmodified 1467.8086 0.80856441 380 O43929 ORC4 Origin recognition complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.8 3.92 2 3 1 1 1 1 1 80.835 77.659 3 0.00096898 98992 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.494 67.815 45583000 6210900 24476000 0 0 0 7633700 0 0 7262700 0 0 0 0 0 0 1745 380 1589 14991;14992;14993;14994;14995 11962;11963;11964;11965 11963 4 AFELMHSGK Unmodified 1018.4906 0.49060109 955 P11766 ADH5 Alcohol dehydrogenase class-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 6 4 3 3 1 1 1 1 1 1 41.838 39.341 2 0.005822 56010 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 106.91 88.128 360540000 212830000 65896000 49344000 0 0 0 0 0 0 0 4677300 7532200 0 0 20261000 1746 955 1590 14996;14997;14998;14999;15000;15001 11966;11967;11968;11969;11970;11971 11968 5 AFELMHSGK Oxidation (M) 1034.4855 0.48551571 955 P11766 ADH5 Alcohol dehydrogenase class-3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 6 2 2 2 28.976 24.593 2 0.0063444 31176 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 101.64 90.133 561380000 359860000 75909000 125600000 0 0 0 0 0 0 0 0 0 0 0 0 1747 955 1590 15002;15003;15004;15005;15006;15007 11972;11973;11974 11974 1236 3 AFENLLGQALTK Unmodified 1303.7136 0.71360139 3573 Q8WWI1 LMO7 LIM domain only protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 83.587 83.639 2 2.4584E-05 96704 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 101.39 79.307 115820000 0 0 0 2361800 5005400 8085200 9599200 12340000 0 16965000 10613000 15318000 9431100 10493000 15612000 1748 3573 1591 15008;15009;15010;15011;15012;15013;15014;15015;15016;15017;15018 11975;11976;11977;11978;11979;11980;11981;11982;11983;11984;11985;11986 11977 12 AFEPATGR Unmodified 847.41882 0.41881635 1561 P49189 ALDH9A1 4-trimethylaminobutyraldehyde dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 20.504 20.739 2 0.028761 21125 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 56.547 21.053 193960000 0 0 0 22198000 7742500 0 8616500 0 0 0 29948000 34873000 0 21761000 68826000 1749 1561 1592 15019;15020;15021;15022;15023;15024;15025 11987;11988;11989;11990 11987 4 AFERAIAGDEHK Unmodified 1342.663 0.6629628 1709 P53041;E7EU14 PPP5C;PPP5D1 Serine/threonine-protein phosphatase 5;Protein PPP5D1 yes no 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 26.415 22.169 3 0.0016315 27289 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 65.295 43.536 633340000 582010000 27438000 23884000 0 0 0 0 0 0 0 0 0 0 0 0 1750 1709 1593 15026;15027;15028 11991;11992;11993;11994 11992 4 AFESDVFHNR Unmodified 1220.5574 0.5574351 186 O14545 TRAFD1 TRAF-type zinc finger domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 44.376 44.552 3 0.001496 49150 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 74.162 67.726 152820000 0 0 0 9126400 6905800 13295000 17959000 0 0 0 18379000 15492000 18187000 22230000 31243000 1751 186 1594 15029;15030;15031;15032;15033;15034;15035;15036;15037 11995;11996;11997;11998;11999;12000;12001 11998 7 AFFAGSQR Unmodified 882.4348 0.43480077 2441 Q14697 GANAB Neutral alpha-glucosidase AB yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 32.872 33.062 2 0.033696 36613 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 53.554 24.216 454490000 0 0 0 20814000 31385000 0 30661000 35537000 20569000 32018000 69124000 56642000 43682000 0 114050000 1752 2441 1595 15038;15039;15040;15041;15042;15043;15044;15045;15046;15047 12002 12002 1 AFFALVTNGVR Unmodified 1193.6557 0.65569258 1742 P54619 PRKAG1 5'-AMP-activated protein kinase subunit gamma-1 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 82.701 82.82 2 0.039652 95959 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 65.305 46.211 6827100 0 0 0 0 0 2063500 0 1848300 0 0 0 2915300 0 0 0 1753 1742 1596 15048;15049;15050 12003 12003 0 AFFPCFDTPAVK Unmodified 1398.6642 0.66420836 4394 Q9H4A4 RNPEP Aminopeptidase B yes yes 0 0 0 By MS/MS 10 0 1 1 84.316 84.495 2 0.040911 97488 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.77 34.353 7988500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7988500 1754 4394 1597 15051 12004 12004 1 AFFSEVER Unmodified 983.47125 0.47124585 5067 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 55.166 55.272 2 0.0068825 61749 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 92.47 65.333 227920000 0 0 0 10374000 6558400 6642700 9231000 8281400 5001900 9535100 0 29237000 12362000 32286000 98415000 1755 5067 1598 15052;15053;15054;15055;15056;15057;15058;15059;15060;15061;15062 12005;12006;12007;12008;12009;12010 12010 6 AFFSEVERR Unmodified 1139.5724 0.57235688 5067 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 46.456 46.752 3 0.0044071 51283 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 103.55 83.76 149780000 0 0 0 4938600 0 0 0 0 5163700 0 18056000 24641000 7486800 17487000 72006000 1756 5067 1599 15063;15064;15065;15066;15067;15068;15069 12011;12012;12013;12014 12011 3 AFGAAGETIVIEELLDGEEVSCLCFTDGK Unmodified 3129.4522 0.45223283 1134 P22102 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 101.23 95.787 3 3.6575E-40 116604 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 101.59 99.153 64232000 10263000 53969000 0 0 0 0 0 0 0 0 0 0 0 0 0 1757 1134 1600 15070;15071;15072 12015;12016 12015 2 AFGEFNVQTAK Unmodified 1210.5982 0.59823728 3644 Q92624 APPBP2 Amyloid protein-binding protein 2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 63.802 58.46 2 0.00070076 75144 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.668 59.908 15433000 0 15433000 0 0 0 0 0 0 0 0 0 0 0 0 0 1758 3644 1601 15073;15074 12017 12017 1 AFGGEEVILK Unmodified 1061.5757 0.57571092 2818 Q5VUA4 ZNF318 Zinc finger protein 318 yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 68.32 63.514 2 0.036461 81281 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 56.432 41.567 40297000 0 38402000 1894700 0 0 0 0 0 0 0 0 0 0 0 0 1759 2818 1602 15075;15076 12018 12018 1 AFGIPIR Unmodified 772.45956 0.45955895 822 P06493 CDK1 Cyclin-dependent kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.962 68.043 2 0.023434 77902 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 85.306 33.075 525150000 0 0 0 24563000 25012000 47209000 38670000 47332000 22230000 59089000 44847000 59882000 43057000 39368000 73891000 1760 822 1603 15077;15078;15079;15080;15081;15082;15083;15084;15085;15086;15087;15088 12019;12020;12021;12022;12023;12024;12025;12026;12027 12020 9 AFGIPVR Unmodified 758.44391 0.44390889 2036 Q00535 CDK5 Cyclin-dependent-like kinase 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 58.717 58.827 2 0.033415 67176 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 71.995 23.753 36108000 0 0 0 2024000 1782500 2607000 2050000 2193400 0 3596300 4229700 6220200 2311300 2818400 6275100 1761 2036 1604 15089;15090;15091;15092;15093;15094;15095;15096;15097;15098;15099 12028;12029;12030;12031 12031 4 AFGNSTEK Unmodified 852.39775 0.39774656 5249 Q9Y5T5 USP16 Ubiquitin carboxyl-terminal hydrolase 16 yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 8.494 5.0509 2 0.014218 7497 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.19 78.629 40979000 9566400 31413000 0 0 0 0 0 0 0 0 0 0 0 0 0 1762 5249 1605 15100;15101 12032 12032 1 AFGPGLQGGSAGSPAR Unmodified 1428.711 0.71097563 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.35 45.519 2 3.5555E-19 50923 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 125.97 125.97 1315600000 0 0 0 58688000 52518000 93630000 82906000 65377000 54130000 109340000 162350000 177710000 107340000 109190000 242370000 1763 1124 1606 15102;15103;15104;15105;15106;15107;15108;15109;15110;15111;15112;15113 12033;12034;12035;12036;12037;12038;12039;12040;12041;12042;12043;12044;12045;12046;12047;12048;12049 12042 17 AFGPGLQGGSAGSPARFTIDTK Unmodified 2134.0807 0.080716522 1124 P21333 FLNA Filamin-A yes yes 0 0 1 By MS/MS 2 0 1 1 79.42 71.29 3 5.7124E-11 93586 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.8 73.142 106630000 106630000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1764 1124 1607 15114 12050 12050 1 AFGSGIDIK Unmodified 906.48108 0.48108226 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 53.119 53.218 2 0.0077875 60170 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 71.501 29.999 114210000 0 0 0 5979800 0 19565000 10412000 9421800 21866000 0 0 0 0 16997000 29972000 1765 5216 1608 15115;15116;15117;15118;15119;15120;15121 12051;12052;12053;12054;12055 12051 5 AFGSGIDIKPGTPPIAGR Unmodified 1752.9523 0.95226853 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.146 73.212 3 9.6742E-20 84402 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 99.569 94.359 507100000 0 0 0 26298000 30247000 25657000 32237000 51831000 40470000 48049000 50961000 55869000 47049000 40856000 57575000 1766 5216 1609 15122;15123;15124;15125;15126;15127;15128;15129;15130;15131;15132;15133 12056;12057;12058;12059;12060;12061;12062;12063;12064;12065;12066 12065 10 AFGSTIVINPEK Unmodified 1274.6871 0.68705229 2332 Q13620 CUL4B Cullin-4B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 6.17 3.85 2 1 3 1 1 1 1 1 1 69.802 67.01 2 0.00012105 77272 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 87.298 68.204 82574000 32622000 17782000 5694500 4354900 0 11577000 0 0 0 0 0 0 0 10544000 0 1767 2332 1610 15134;15135;15136;15137;15138;15139 12067;12068;12069;12070;12071 12067 4 AFGVAFVK Unmodified 837.47487 0.47487467 4433 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.86 68.94 2 0.0083495 79234 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 86.512 37.301 88047000 0 0 0 4325800 4687600 8354100 6482100 5828700 5549500 8547100 5887300 11656000 7441600 7729200 11557000 1768 4433 1611 15140;15141;15142;15143;15144;15145;15146;15147;15148;15149;15150;15151 12072;12073;12074;12075;12076;12077;12078;12079;12080;12081;12082 12072 9 AFGYVCGGEGQHQFFAIK Unmodified 2014.936 0.93596654 2021 P98082 DAB2 Disabled homolog 2 yes yes 0 0 0 By MS/MS 10 0 1 1 77.633 77.898 3 8.407E-08 89516 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.191 72.522 21676000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21676000 1769 2021 1612 15152 12083 12083 1 AFGYYGPLR Unmodified 1042.5236 0.52361577 2017 P84103 SRSF3 Serine/arginine-rich splicing factor 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.636 66.721 2 0.0029018 75669 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 135.87 117.08 969920000 0 0 0 50918000 58773000 59582000 77462000 63835000 52618000 84493000 96270000 120650000 79327000 72804000 153190000 1770 2017 1613 15153;15154;15155;15156;15157;15158;15159;15160;15161;15162;15163;15164 12084;12085;12086;12087;12088;12089;12090;12091;12092;12093;12094;12095;12096;12097;12098;12099 12095 15 AFHNEAQVNPERK Unmodified 1538.759 0.75898845 1067 P17987 TCP1 T-complex protein 1 subunit alpha yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 3 3 1 1 3 2 2 2 16.337 16.49 2;3;4 1.1842E-09 17173 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 91.939 83.119 820680000 0 0 0 34322000 49351000 112560000 73803000 0 35646000 52696000 80223000 101300000 60480000 56884000 163430000 1771 1067 1614 15165;15166;15167;15168;15169;15170;15171;15172;15173;15174;15175;15176;15177;15178;15179;15180;15181;15182;15183;15184;15185;15186;15187 12100;12101;12102;12103;12104;12105;12106;12107;12108;12109;12110;12111;12112;12113;12114;12115;12116;12117 12101 15 AFHPFIAGPYNR Unmodified 1388.699 0.69895438 2033 Q00341 HDLBP Vigilin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 1 2 2 1 2 2 1 2 2 2 2 66.487 66.622 2;3 0.0021762 76268 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 46.706 41.222 377320000 0 0 0 14407000 7655500 37585000 24466000 21266000 24177000 22281000 23492000 52307000 32015000 34672000 82995000 1772 2033 1615 15188;15189;15190;15191;15192;15193;15194;15195;15196;15197;15198;15199;15200;15201;15202;15203;15204;15205;15206;15207 12118;12119;12120;12121;12122;12123;12124;12125;12126;12127;12128;12129 12122 12 AFHPTYEEK Unmodified 1120.5189 0.51892433 4382 Q9H3P7 ACBD3 Golgi resident protein GCP60 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 26.106 23.434 2 0.00027061 30243 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 151.04 103.95 249310000 142380000 0 95676000 0 0 0 0 0 0 0 0 11248000 0 0 0 1773 4382 1616 15208;15209;15210 12130;12131;12132;12133 12132 4 AFIANLK Unmodified 775.45922 0.4592246 1469 P42858 HTT Huntingtin yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 58.355 52.296 2 0.035805 71015 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.025 7.6773 18570000 12030000 0 6540000 0 0 0 0 0 0 0 0 0 0 0 0 1774 1469 1617 15211;15212 12134 12134 1 AFIGFEGVK Unmodified 966.51747 0.51746776 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching 8.56 3 2 1 13 2 1 2 1 1 1 1 1 1 1 1 1 1 1 72.6 71.922 2 0.0083679 81528 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 69.825 46.301 443650000 0 39915000 33895000 45232000 21593000 25930000 28331000 35147000 18831000 30204000 30147000 43376000 28800000 22537000 39710000 1775 1029 1618 15213;15214;15215;15216;15217;15218;15219;15220;15221;15222;15223;15224;15225;15226;15227;15228 12135;12136;12137;12138;12139;12140;12141 12138 7 AFIPEMLK Oxidation (M) 963.50994 0.50993955 2625 Q16656 NRF1 Nuclear respiratory factor 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 60.785 60.777 2 0.013184 69343 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 63.148 49.152 24723000 0 0 0 2562300 2279600 2904400 2990400 2851800 0 3022800 0 4268300 3843100 0 0 1776 2625 1619 15229;15230;15231;15232;15233;15234;15235;15236 12142 12142 4279 1 AFIPEMLK Unmodified 947.51502 0.51502492 2625 Q16656 NRF1 Nuclear respiratory factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 77.117 77.266 2 0.018051 89142 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 64.757 51.55 54085000 0 0 0 0 0 3811000 3482600 3629500 0 5409900 5915700 4819200 5702500 5500500 15815000 1777 2625 1619 15237;15238;15239;15240;15241;15242;15243;15244;15245 12143;12144;12145 12145 3 AFIPQLLSR Unmodified 1043.6128 0.61276513 1006 P14735 IDE Insulin-degrading enzyme yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 81.812 81.704 2 0.012914 94848 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 60.59 53.301 14021000 0 0 0 10034000 0 0 0 3986900 0 0 0 0 0 0 0 1778 1006 1620 15246;15247 12146;12147 12147 2 AFITNIPFDVK Unmodified 1263.6863 0.68632401 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 86.494 86.563 2 1.9611E-05 100426 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 150.35 141.39 1387300000 0 0 0 26990000 73666000 106800000 83179000 118070000 93372000 129990000 126900000 150980000 92035000 111400000 273950000 1779 1681 1621 15248;15249;15250;15251;15252;15253;15254;15255;15256;15257;15258;15259 12148;12149;12150;12151;12152;12153;12154;12155;12156;12157;12158;12159;12160;12161;12162;12163;12164;12165 12163 18 AFIVTDEDIRK Unmodified 1305.6929 0.69286595 4832 Q9UBB5 MBD2 Methyl-CpG-binding domain protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.79 3.51 3 1 10 1 1 2 1 1 1 1 1 1 1 1 1 1 54.398 53.076 2;3 0.0039515 59558 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 43.502 35.092 345390000 15067000 16843000 52126000 0 13401000 27162000 15944000 0 16387000 31203000 27935000 34329000 29460000 23025000 42508000 1780 4832 1622 15260;15261;15262;15263;15264;15265;15266;15267;15268;15269;15270;15271;15272;15273 12166;12167;12168;12169;12170;12171;12172;12173;12174;12175 12167 7 AFLADPSAFVAAAPVAAATTAAPAAAAAPAK Unmodified 2751.4596 0.45956554 808 P05388 RPLP0 60S acidic ribosomal protein P0 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.52 1.91 2 31 1 1 1 3 2 2 3 2 3 3 3 3 3 3 93.326 93.191 2;3;4 5.3131E-72 108286 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 77.51 75.427 1228600000 0 367470000 754430 4838800 43013000 34027000 21948000 58484000 27737000 149850000 94542000 98489000 34346000 71901000 221240000 1781 808 1623 15274;15275;15276;15277;15278;15279;15280;15281;15282;15283;15284;15285;15286;15287;15288;15289;15290;15291;15292;15293;15294;15295;15296;15297;15298;15299;15300;15301;15302;15303;15304;15305;15306 12176;12177;12178;12179;12180;12181;12182;12183;12184;12185;12186;12187;12188;12189 12177 14 AFLAELEQNSPK Unmodified 1345.6878 0.68778057 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS 3 0 1 1 77.196 73.718 2 0.00084641 88581 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 90.696 80.238 5299000 0 5299000 0 0 0 0 0 0 0 0 0 0 0 0 0 1782 5049 1624 15307 12190 12190 1 AFLASGPYLTHQQK Acetyl (Protein N-term) 1601.8202 0.82019173 5291 Q9Y6M9 NDUFB9 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 yes yes 1 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 81.711 81.722 2 0.0009705 94927 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 61.353 49.14 13913000 0 0 0 1897000 0 0 0 5600600 2728300 0 0 0 3687400 0 0 1783 5291 1625 15308;15309;15310;15311 12191;12192 12192 2 AFLDALQNQAEASSK Unmodified 1591.7842 0.78420015 2210 Q12931 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 74.144 72.986 2 2.1855E-45 90667 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 180.2 152.28 739350000 6586500 253820000 5858300 22766000 30963000 44345000 26105000 37513000 24726000 51204000 57139000 41648000 39700000 37653000 59332000 1784 2210 1626 15312;15313;15314;15315;15316;15317;15318;15319;15320;15321;15322;15323;15324;15325;15326;15327 12193;12194;12195;12196;12197;12198;12199;12200;12201;12202;12203;12204;12205;12206;12207;12208;12209;12210;12211;12212 12196 19 AFLDNGPK Unmodified 860.43922 0.43921744 1974 P78344 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.671 33.853 2 0.0051134 35942 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 134.44 100.75 2443100000 0 0 0 175840000 170490000 159570000 188580000 186830000 132540000 198300000 278160000 298580000 233950000 199560000 220660000 1785 1974 1627 15328;15329;15330;15331;15332;15333;15334;15335;15336;15337;15338;15339 12213;12214;12215;12216;12217;12218;12219;12220;12221;12222;12223;12224 12220 9 AFLDSLPDVK Unmodified 1103.5863 0.58627561 271 O15294 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79.363 78.385 2 0.0081131 90360 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.828 50.137 957970000 27484000 398000000 15517000 26802000 26888000 40647000 46100000 38204000 31815000 47756000 44083000 50776000 43555000 50044000 70292000 1786 271 1628 15340;15341;15342;15343;15344;15345;15346;15347;15348;15349;15350;15351;15352;15353;15354 12225;12226;12227;12228;12229 12227 4 AFLEENNLDYIIR Unmodified 1608.8148 0.814772 1709 P53041 PPP5C Serine/threonine-protein phosphatase 5 yes yes 0 0 0 By MS/MS 10 0 1 1 86.214 86.382 2 0.00010591 99800 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 108.43 92.86 8722800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8722800 1787 1709 1629 15355 12230 12230 1 AFLEENNLDYIIRSHEVK Unmodified 2189.1117 0.1116823 1709 P53041 PPP5C Serine/threonine-protein phosphatase 5 yes yes 0 0 1 By MS/MS 1 0 1 1 109.17 114.44 3 0.031368 95620 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 36.127 21.513 9849700 9849700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1788 1709 1630 15356 12231 12231 0 AFLEILHTYQK Unmodified 1361.7343 0.73433683 3994 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 77.131 77.293 3 0.0043713 88710 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.252 37.818 65433000 0 0 0 0 0 8347200 0 4020500 6626800 0 4955700 12086000 2642400 0 26755000 1789 3994 1631 15357;15358;15359;15360;15361;15362;15363 12232;12233 12233 2 AFLFDVVSK Unmodified 1024.5593 0.55933258 4498 Q9HB90;Q9NQL2 RRAGC;RRAGD Ras-related GTP-binding protein C;Ras-related GTP-binding protein D yes no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 6.71 3.81 2 1 4 1 1 1 1 1 1 1 77.284 75.294 2 0.02624 105728 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.812 34.919 97507000 63469000 6645300 17396000 936160 0 1667000 6240900 1152700 0 0 0 0 0 0 0 1790 4498 1632 15364;15365;15366;15367;15368;15369;15370 12234;12235;12236;12237;12238 12237 5 AFLFVNK Unmodified 837.47487 0.47487467 3301 Q8N0X7 SPG20 Spartin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.002 67.086 2 0.017078 77031 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 114.67 75.449 1137900000 0 0 0 67666000 73681000 74193000 92140000 98860000 77844000 94355000 99760000 134260000 115790000 92044000 117310000 1791 3301 1633 15371;15372;15373;15374;15375;15376;15377;15378;15379;15380;15381;15382 12239;12240;12241;12242;12243;12244;12245;12246;12247;12248;12249;12250 12241 10 AFLGQVLVR Unmodified 1001.6022 0.60220045 1246 P29372 MPG DNA-3-methyladenine glycosylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.661 76.72 2 0.0034457 88526 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 94.262 60.711 120160000 0 0 0 4488100 5092000 9219800 8608400 7922400 8071000 12478000 10208000 15487000 8063900 9548900 20974000 1792 1246 1634 15383;15384;15385;15386;15387;15388;15389;15390;15391;15392;15393;15394 12251;12252;12253;12254;12255;12256;12257;12258;12259;12260;12261;12262 12256 12 AFLIEPEHVNTVGYGK Unmodified 1772.9097 0.90973501 3893 Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 72.784 72.649 3 0.00033206 83570 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 46.926 36.587 52095000 0 0 0 9894300 0 26959000 0 15241000 0 0 0 0 0 0 0 1793 3893 1635 15395;15396;15397 12263;12264;12265 12264 3 AFLLDPDRCVVQR Unmodified 1587.8191 0.81914587 4154 Q9BTY7 HGH1 Protein HGH1 homolog yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 70.776 70.985 3 0.022354 80947 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.968 27.59 24569000 0 0 0 0 0 5561300 0 0 0 2631200 0 3840900 0 4034600 8501000 1794 4154 1636 15398;15399;15400;15401;15402 12266;12267 12266 2 AFLLDSALAVK Unmodified 1146.6649 0.66486028 3338 Q8N554 ZNF276 Zinc finger protein 276 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 84.548 84.652 2 0.030061 98117 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 48.794 34.019 5327100 0 0 0 0 0 0 0 0 0 2920500 0 0 0 2406600 0 1795 3338 1637 15403;15404 12268 12268 1 AFLLESLLK Unmodified 1032.6219 0.62193284 3897 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 93.239 93.347 2 0.01094 108213 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.565 46.601 12510000 0 0 0 0 442950 846630 656660 684670 1083400 2215700 1129600 765160 0 763190 3922100 1796 3897 1638 15405;15406;15407;15408;15409;15410;15411;15412;15413;15414 12269;12270 12270 2 AFLLFPTIER Unmodified 1205.6808 0.6808447 4427 Q9H6V9 C2orf43 UPF0554 protein C2orf43 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 92.075 92.208 2 0.016645 106866 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.418 35.422 22694000 0 0 0 0 0 3181400 0 3078900 3281100 2840100 0 4656200 0 0 5656100 1797 4427 1639 15415;15416;15417;15418;15419;15420 12271;12272 12272 2 AFLLQTVDGK Unmodified 1090.6023 0.60226003 1276 P30305 CDC25B M-phase inducer phosphatase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 70.187 70.237 2 0.002754 80914 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 80.438 44.82 54620000 0 0 0 2657300 4519600 3625700 4758400 5941000 3256600 5663300 6050100 0 5265800 4286500 8595900 1798 1276 1640 15421;15422;15423;15424;15425;15426;15427;15428;15429;15430;15431 12273;12274;12275;12276;12277;12278;12279;12280;12281 12273 8 AFLNAIMR Unmodified 934.50586 0.50585722 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 no no 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 75.801 75.674 2 0.041266 87860 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 50.025 34.393 14095000 0 0 0 3252600 2354700 0 2882500 5605700 0 0 0 0 0 0 0 1799 2451 1641 15432;15433;15434;15435 12282 12282 1 AFLPAMTK Unmodified 877.47316 0.47316011 3401 Q8NBQ5 HSD17B11 Estradiol 17-beta-dehydrogenase 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.319 60.426 2 0.012186 67920 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 75.213 60.549 263080000 0 0 0 10490000 17510000 23258000 15814000 22993000 15601000 22338000 31379000 26150000 22377000 23621000 31552000 1800 3401 1642 15436;15437;15438;15439;15440;15441;15442;15443;15444;15445;15446;15447 12283;12284;12285;12286;12287;12288;12289;12290;12291 12289 9 AFLQLDK Unmodified 833.4647 0.46470391 4813 Q9P2B7 CFAP97 Cilia- and flagella-associated protein 97 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching 10 0 8 1 1 1 1 1 1 1 1 56.594 56.737 2 0.039143 64288 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 69.176 22.512 43573000 0 0 0 0 6309400 5186800 5733700 0 3808400 7308700 5378200 6323000 0 3524600 0 1801 4813 1643 15448;15449;15450;15451;15452;15453;15454;15455 12292;12293 12292 2 AFMEALQAGADISMIGQFGVGFYSAYLVAEK 2 Oxidation (M) 3315.5832 0.58318743 862;850 P07900;P08238 HSP90AA1;HSP90AB1 Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta no no 0 2 0 By matching By MS/MS By MS/MS 2.5 0.5 2 2 1 2 1 100.37 96.848 3 4.2341E-10 117471 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 47.429 41.709 24404000 4654000 16306000 3444100 0 0 0 0 0 0 0 0 0 0 0 0 1802 850;862 1644 15456;15457;15458;15459 12294;12295 12295 1064;1065 2 AFMGPLK Oxidation (M) 778.40475 0.40474619 1402 P39023 RPL3 60S ribosomal protein L3 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 35.092 35.251 2 0.034598 39233 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 59.641 37.019 261380000 0 0 0 0 18702000 23516000 22266000 21460000 25351000 35449000 0 41652000 41736000 31245000 0 1803 1402 1645 15460;15461;15462;15463;15464;15465;15466;15467;15468 12296;12297;12298 12296 3 AFMGPLK Unmodified 762.40983 0.40983157 1402 P39023 RPL3 60S ribosomal protein L3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 50.151 50.251 2 0.044016 56858 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 66.994 53.655 234030000 0 0 0 9493100 10567000 0 12652000 22363000 0 23380000 30999000 0 31875000 41862000 50840000 1804 1402 1645 15469;15470;15471;15472;15473;15474;15475;15476;15477 12299 12299 1 AFMGQGAGR Oxidation (M) 909.41269 0.41268512 96 CON__Q5XKE5;Q5XKE5 KRT79 Keratin, type II cytoskeletal 79 yes no 0 1 0 By MS/MS 10 0 1 1 9.8694 9.7346 2 0.041169 8267 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 71.715 62.702 + 6868200 0 0 0 6868200 0 0 0 0 0 0 0 0 0 0 0 1805 96 1646 15478 12300 12300 0 AFMGTPVQK Oxidation (M) 993.49535 0.49535211 1492 P46013 MKI67 Antigen KI-67 yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.08 3.33 2 1 9 1 2 1 1 1 1 1 1 1 1 1 25.542 24.493 2 0.0041999 26562 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 75.243 43.308 173000000 10430000 61162000 0 19832000 7852700 0 12831000 7671200 0 9122500 9678700 16847000 9781100 7787400 0 1806 1492 1647 15479;15480;15481;15482;15483;15484;15485;15486;15487;15488;15489;15490 12301;12302;12303;12304;12305;12306;12307;12308;12309;12310 12309 2342 10 AFMGTPVQK Unmodified 977.50044 0.50043749 1492 P46013 MKI67 Antigen KI-67 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 6 4 2 2 1 1 1 1 44.333 38.263 2 0.033612 52510 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.567 33.899 132530000 38185000 94348000 0 0 0 0 0 0 0 0 0 0 0 0 0 1807 1492 1647 15491;15492;15493;15494 12311;12312;12313 12311 3 AFMTADLPNELIELLEK Oxidation (M) 1962.002 0.00198042 2040;1723 P53675;Q00610 CLTCL1;CLTC Clathrin heavy chain 2;Clathrin heavy chain 1 no no 0 1 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 6 2 3 4 1 101.75 96.775 2;3 2.9315E-72 120859 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 177.16 163.2 504150000 301430000 201360000 1357000 0 0 0 0 0 0 0 0 0 0 0 0 1808 1723;2040 1648 15495;15496;15497;15498;15499;15500;15501;15502 12314;12315;12316;12317;12318;12319 12314 2799 3 AFMTADLPNELIELLEK Unmodified 1946.0071 0.0070657979 2040;1723 P53675;Q00610 CLTCL1;CLTC Clathrin heavy chain 2;Clathrin heavy chain 1 no no 0 0 0 By MS/MS By MS/MS 2.4 0.49 3 2 3 2 102.39 96.765 2;3 4.323E-05 119573 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.208 64.112 169080000 108700000 60385000 0 0 0 0 0 0 0 0 0 0 0 0 0 1809 1723;2040 1648 15503;15504;15505;15506;15507 12320;12321;12322;12323 12322 3 AFMTAPGGK Unmodified 878.43202 0.43202358 3657 Q92766 RREB1 Ras-responsive element-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 33.197 33.356 2 0.031671 35419 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 47.657 14.728 84749000 0 0 0 0 7377700 8584500 7840900 0 6333600 13615000 0 17515000 13752000 9729700 0 1810 3657 1649 15508;15509;15510;15511;15512;15513;15514;15515 12324;12325;12326;12327 12326 4 AFMVTDEDIR Oxidation (M) 1211.5492 0.54923818 707 O95983 MBD3 Methyl-CpG-binding domain protein 3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 54.161 53.57 2 0.002342 61487 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 76.064 63.011 12895000 0 0 0 6922700 5972100 0 0 0 0 0 0 0 0 0 0 1811 707 1650 15516;15517;15518 12328;12329;12330 12329 853 3 AFMVTDEDIRK Oxidation (M) 1339.6442 0.6442012 707 O95983 MBD3 Methyl-CpG-binding domain protein 3 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 42.776 42.98 3 0.00015665 47780 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 78.513 71.466 58083000 0 0 0 0 4756000 0 8738600 4388900 8988000 0 9844600 11170000 10197000 0 0 1812 707 1651 15519;15520;15521;15522;15523;15524;15525 12331;12332;12333;12334 12332 853 4 AFNDPFIQK Unmodified 1078.5447 0.54474515 3633 Q92598 HSPH1 Heat shock protein 105 kDa yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.067 65.155 2 0.0034247 74323 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 105.81 86.105 231600000 0 0 0 6838000 5874900 7346700 8857000 8377700 5732800 10209000 34839000 26350000 12442000 24163000 80569000 1813 3633 1652 15526;15527;15528;15529;15530;15531;15532;15533;15534;15535;15536;15537 12335;12336;12337;12338;12339;12340;12341;12342;12343;12344;12345;12346;12347 12345 12 AFNSETDSFK Unmodified 1144.5037 0.50366819 5023 Q9UMZ2 SYNRG Synergin gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 36.315 36.59 2 0.0017421 40382 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 88.948 54.945 50842000 0 0 0 0 0 7013700 4390500 0 3807100 6692600 5523100 0 8989800 6059500 8365400 1814 5023 1653 15538;15539;15540;15541;15542;15543;15544;15545 12348;12349;12350;12351;12352;12353;12354 12351 7 AFNSNYEQR Unmodified 1127.4996 0.49958587 5276 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 22.159 22.404 2 0.040291 23027 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 62.546 46.914 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1815 5276 1654 15546;15547 12355;12356 12356 2 AFNSVDPTFDNSVPSK Unmodified 1723.8053 0.80532952 4021 Q99543 DNAJC2 DnaJ homolog subfamily C member 2;DnaJ homolog subfamily C member 2, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 65.858 65.946 2 0.00088732 74898 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.496 66.772 45582000 0 0 0 2061600 1641600 0 2520200 3210700 0 3981900 6683100 5237400 4219100 5139000 10887000 1816 4021 1655 15548;15549;15550;15551;15552;15553;15554;15555;15556;15557 12357;12358;12359;12360;12361;12362;12363;12364 12359 8 AFPCWDEPAIK Unmodified 1332.6173 0.61725816 1771 P55786 NPEPPS Puromycin-sensitive aminopeptidase yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 77.13 77.364 2 0.0076229 88878 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.04 51.413 18198000 0 0 0 0 0 0 0 0 0 0 5160600 0 0 0 13037000 1817 1771 1656 15558;15559 12365 12365 1 AFPDSPGLNR Unmodified 1072.5302 0.53015772 1352 P35270 SPR Sepiapterin reductase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 47.678 47.751 2 0.033642 53533 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 74.255 63.389 169140000 0 0 0 10735000 11288000 15830000 12825000 14421000 14518000 30067000 25063000 34389000 0 0 0 1818 1352 1657 15560;15561;15562;15563;15564;15565;15566;15567;15568 12366;12367;12368;12369 12368 0 AFPGIISEDFSEK Unmodified 1438.698 0.6980109 2972 Q6UB99 ANKRD11 Ankyrin repeat domain-containing protein 11 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 81.411 81.564 2 0.039992 94496 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 32.008 24.363 26899000 0 0 0 0 0 1970200 2137000 2880900 2391300 0 3422600 3902700 0 3619500 6575200 1819 2972 1658 15569;15570;15571;15572;15573;15574;15575;15576 12370;12371 12370 2 AFPLAEWQPSDVDQR Unmodified 1757.8373 0.83729835 3980 Q96S19 C16orf13 UPF0585 protein C16orf13 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 83.295 83.404 2 5.116E-07 96299 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.568 74.14 9885400 0 0 0 0 0 2781100 0 0 0 0 0 0 0 0 7104400 1820 3980 1659 15577;15578 12372;12373 12373 2 AFPMPGFDEH Unmodified 1146.4804 0.48043033 1336 P34897 SHMT2 Serine hydroxymethyltransferase, mitochondrial yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 76.954 77.179 2 0.016242 88673 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.65 47.59 12170000 0 0 0 0 0 0 0 748030 0 0 4359500 0 0 0 7062300 1821 1336 1660 15579;15580;15581 12374 12374 1 AFPNPYADYNK Unmodified 1298.5932 0.5931519 370 O43813 LANCL1 LanC-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.928 59.038 2 0.0043491 66410 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.691 50.18 146450000 0 0 0 5604200 6021600 7943700 6249000 6321900 4856500 9266000 20681000 16530000 7935800 16479000 38560000 1822 370 1661 15582;15583;15584;15585;15586;15587;15588;15589;15590;15591;15592;15593 12375;12376;12377;12378;12379;12380;12381;12382;12383 12377 7 AFPQAANGSAK Unmodified 1060.5302 0.53015772 648 O95372 LYPLA2 Acyl-protein thioesterase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 20.784 21.107 2 0.0064867 21423 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 56.432 30.492 36856000 0 0 0 0 0 4551900 2845300 0 0 5257700 4717500 6790100 4247300 3107100 5338800 1823 648 1662 15594;15595;15596;15597;15598;15599;15600;15601 12384;12385;12386;12387;12388;12389;12390 12388 7 AFQAAFR Unmodified 809.41842 0.41842242 2476 Q15021 NCAPD2 Condensin complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 41.504 41.682 2 0.02563 46653 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 80.377 21.717 132800000 0 0 0 7425100 8632400 12291000 10275000 0 5475900 14181000 11582000 15280000 12790000 13989000 20876000 1824 2476 1663 15602;15603;15604;15605;15606;15607;15608;15609;15610;15611;15612 12391;12392;12393;12394 12391 4 AFQATQQK Unmodified 920.47158 0.4715802 3530 Q8WTS6 SETD7 Histone-lysine N-methyltransferase SETD7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 13 2 1 1 1 1 1 2 2 2 8.7617 8.9204 2 0.014031 7241 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.141 41.765 19709000 0 0 0 0 2563800 1367900 1196400 0 944080 0 3128400 1171800 2501700 2324200 4510400 1825 3530 1664 15613;15614;15615;15616;15617;15618;15619;15620;15621;15622;15623;15624;15625 12395;12396 12395 2 AFQEFIR Unmodified 909.47085 0.47085192 3291 Q8IZ69 TRMT2A tRNA (uracil-5-)-methyltransferase homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 58.92 59.106 2 0.02342 66244 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.086 52.348 77927000 0 0 0 0 7209400 8014900 6829500 0 6729800 7071300 8277000 11296000 8008100 6885400 7605600 1826 3291 1665 15626;15627;15628;15629;15630;15631;15632;15633;15634;15635 12397;12398;12399;12400;12401 12399 5 AFQEQVDK Unmodified 963.46616 0.46616048 922 P10588 NR2F6 Nuclear receptor subfamily 2 group F member 6 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 19.585 19.894 2 0.0067687 20252 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 97.798 59.006 85027000 0 0 0 0 0 8485700 11619000 0 6672800 0 11360000 11885000 10668000 11575000 12761000 1827 922 1666 15636;15637;15638;15639;15640;15641;15642;15643;15644;15645 12402;12403;12404;12405;12406 12402 5 AFQNTATACAPVSHYR Unmodified 1792.8315 0.83150147 4442 Q9H814 PHAX Phosphorylated adapter RNA export protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.914 42.091 3 0.01094 47634 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 32.917 31.185 226890000 0 0 0 8640700 13393000 10986000 10410000 10051000 7421100 20457000 30386000 24422000 26470000 26632000 37621000 1828 4442 1667 15646;15647;15648;15649;15650;15651;15652;15653;15654;15655;15656;15657 12407;12408 12408 2 AFQNVFAPR Unmodified 1048.5454 0.54541385 1024 P15586 GNS N-acetylglucosamine-6-sulfatase yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 62.36 62.53 2 0.0075471 71285 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 72.138 51.579 26944000 0 0 0 0 4986400 2689100 0 0 2816600 0 3093700 5592800 0 0 7765700 1829 1024 1668 15658;15659;15660;15661;15662;15663 12409;12410;12411;12412 12412 4 AFQQLEHK Unmodified 999.51378 0.51377937 4339 Q9H0U9 TSPYL1 Testis-specific Y-encoded-like protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 19.734 20.049 2 0.045442 19506 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 75.243 41.24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1830 4339 1669 15664 12413 12413 1 AFQYVETHGEVCPANWTPDSPTIK Unmodified 2746.2697 0.26971586 1265 P30048 PRDX3 Thioredoxin-dependent peroxide reductase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.8 3.12 3 1 1 1 2 1 1 80.989 77.309 3 3.5263E-31 94436 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 110.6 102.65 283650000 17100000 202920000 52464000 0 0 0 0 0 0 0 0 0 0 0 11160000 1831 1265 1670 15665;15666;15667;15668;15669 12414;12415;12416;12417;12418 12418 5 AFQYVETHGEVCPANWTPDSPTIKPSPAASK Unmodified 3384.6085 0.60849098 1265 P30048 PRDX3 Thioredoxin-dependent peroxide reductase, mitochondrial yes yes 0 0 1 By MS/MS 2 0 1 1 80.986 72.855 4 1.7095E-12 95486 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.393 60.376 40210000 40210000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1832 1265 1671 15670 12419 12419 1 AFRDVYHLNR Unmodified 1289.6629 0.66290322 2368;1781 Q14119;P56270 VEZF1;MAZ Vascular endothelial zinc finger 1;Myc-associated zinc finger protein no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 40.043 40.295 3 0.016772 44865 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 35.71 19.821 86617000 0 0 0 3791800 0 9561900 5505000 0 8729300 0 6665300 14726000 10528000 0 27109000 1833 2368;1781 1672 15671;15672;15673;15674;15675;15676;15677;15678 12420;12421;12422 12420 2 AFRGQDDK Unmodified 935.44609 0.44609374 4357 Q9H223 EHD4 EH domain-containing protein 4 yes yes 0 0 1 By MS/MS 2 0 1 1 5.7909 2.4135 2 1.0284E-19 5295 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 177.78 88.408 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1834 4357 1673 15679 12423 12423 1 AFRSSTIQDQK Unmodified 1279.6521 0.65206377 5296 Q9Y6W5 WASF2 Wiskott-Aldrich syndrome protein family member 2 yes yes 0 0 1 By MS/MS 2 0 1 1 22.369 17.473 3 0.0077509 25070 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.737 62.469 91238000 91238000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1835 5296 1674 15680 12424 12424 0 AFRTLQEALK Unmodified 1175.6663 0.66625727 2933 Q6P3X3 TTC27 Tetratricopeptide repeat protein 27 yes yes 0 0 1 By MS/MS 2 0 1 1 65.81 57.522 3 0.0026 77206 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.786 37.532 7608800 7608800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1836 2933 1675 15681 12425 12425 1 AFSAAVQMHDVLVK Unmodified 1514.7915 0.79153413 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 0 0 By MS/MS 2 0 1 1 79.927 71.797 3 0.00024757 94232 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.675 50.662 11689000 11689000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1837 5189 1676 15682 12426 12426 1 AFSAVDTDGNGTINAQELGAALK Unmodified 2262.1128 0.11280451 4781 Q9NZT1 CALML5 Calmodulin-like protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.04 2.54 2 1 21 3 2 2 2 2 1 2 2 2 2 1 1 2 82.961 82.474 2;3 4.9719E-280 95545 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 232.8 223 2404600000 0 279790000 0 241490000 294440000 89797000 77156000 208470000 67239000 201440000 213550000 326790000 85816000 93096000 225490000 1838 4781 1677 15683;15684;15685;15686;15687;15688;15689;15690;15691;15692;15693;15694;15695;15696;15697;15698;15699;15700;15701;15702;15703;15704;15705;15706 12427;12428;12429;12430;12431;12432;12433;12434;12435;12436;12437;12438;12439;12440;12441;12442;12443;12444 12427 16 AFSDPFVEAEK Unmodified 1238.5819 0.58191851 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 70.372 69.822 2 0.00030645 79192 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 107.21 94.168 576370000 0 202070000 0 9143400 851220 9203700 13350000 9603400 7050700 13359000 60380000 39647000 12646000 48257000 150810000 1839 1337 1678 15707;15708;15709;15710;15711;15712;15713;15714;15715;15716;15717;15718;15719;15720 12445;12446;12447;12448;12449;12450;12451;12452;12453;12454;12455;12456;12457 12454 12 AFSEIQGLTDQADK Unmodified 1521.7311 0.73110195 3241 Q8IWI9 MGA MAX gene-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 66.82 66.934 2 8.887E-09 77142 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 121.9 107.69 33964000 0 0 0 0 2727500 2367200 2901900 2994100 2388100 3958100 3671500 5096000 3825700 4034000 0 1840 3241 1679 15721;15722;15723;15724;15725;15726;15727;15728;15729;15730 12458;12459;12460;12461;12462;12463;12464;12465;12466;12467 12465 10 AFSEISGMEK Oxidation (M) 1113.5012 0.50122535 4621 Q9NS87 KIF15 Kinesin-like protein KIF15 yes yes 0 1 0 By MS/MS 2 0 1 1 34.489 29.733 2 0.025669 39014 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 59.153 38.454 10072000 0 10072000 0 0 0 0 0 0 0 0 0 0 0 0 0 1841 4621 1680 15731 12468 12468 1 AFSEISGMEK Unmodified 1097.5063 0.50631073 4621 Q9NS87 KIF15 Kinesin-like protein KIF15 yes yes 0 0 0 By MS/MS 2 0 1 1 53.47 47.678 2 0.0030896 61789 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.009 68.86 39960000 0 39960000 0 0 0 0 0 0 0 0 0 0 0 0 0 1842 4621 1680 15732 12469 12469 1 AFSETEQTK Unmodified 1039.4822 0.48220447 5280 Q9Y6E2 BZW2 Basic leucine zipper and W2 domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13.299 12.905 2 0.0012532 15039 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.54 103.74 764470000 701770 307420000 0 20501000 27574000 43088000 33281000 33581000 24514000 51512000 49977000 32833000 48176000 42737000 48568000 1843 5280 1681 15733;15734;15735;15736;15737;15738;15739;15740;15741;15742;15743;15744;15745;15746 12470;12471;12472;12473;12474;12475;12476;12477;12478;12479 12473 10 AFSGYLGTDQSK Unmodified 1272.5986 0.59863121 929 P10768 ESD S-formylglutathione hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.67 3.89 4 1 4 1 3 1 1 1 1 1 48.589 46.489 2 3.7651E-07 59246 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.23 96.452 143220000 42191000 11949000 8091800 0 0 0 0 0 0 0 15580000 14655000 0 10438000 40318000 1844 929 1682 15747;15748;15749;15750;15751;15752;15753;15754;15755 12480;12481;12482;12483;12484;12485;12486;12487;12488 12480 8 AFSITQGLLK Unmodified 1076.623 0.62299547 248 O15067 PFAS Phosphoribosylformylglycinamidine synthase yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 79.471 79.625 2 0.0046058 92039 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 72.23 53.827 113290000 0 0 0 0 0 0 0 4080200 0 8124600 15510000 14791000 4364100 13690000 52734000 1845 248 1683 15756;15757;15758;15759;15760;15761;15762 12489;12490;12491 12489 3 AFSPTTVNTGR Unmodified 1149.5778 0.57783619 1854 P61619 SEC61A1 Protein transport protein Sec61 subunit alpha isoform 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 37.238 37.379 2 0.0048432 41942 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 60.518 36.725 60809000 0 0 0 8825000 6013300 0 4772800 7331000 3198800 5333900 5800500 7725900 5914400 5893100 0 1846 1854 1684 15763;15764;15765;15766;15767;15768;15769;15770;15771;15772 12492;12493;12494;12495 12494 4 AFSQFGK Unmodified 783.39154 0.39153897 407 O60506 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 30.536 30.7 2 0.027575 33730 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 77.374 54.752 212480000 0 0 0 15431000 12861000 18268000 12671000 11869000 10027000 16723000 0 37484000 20017000 18828000 38301000 1847 407 1685 15773;15774;15775;15776;15777;15778;15779;15780;15781;15782;15783 12496 12496 1 AFSQFVRPLIAAK Unmodified 1446.8347 0.83471958 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 77.734 77.89 3 0.0021736 90001 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 54.772 46.175 45535000 0 0 0 0 0 12513000 0 6797700 7865700 0 0 0 0 0 18359000 1848 2451 1686 15784;15785;15786;15787 12497;12498 12497 2 AFSQNSGLINHQR Unmodified 1470.7328 0.7327737 1045 P17028 ZNF24 Zinc finger protein 24 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 1 2 2 2 32.443 32.607 2;3 4.7462E-08 34751 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 103.7 87.476 267520000 0 0 0 22312000 19981000 25530000 17960000 14752000 12057000 26433000 22601000 21892000 30653000 23399000 29949000 1849 1045 1687 15788;15789;15790;15791;15792;15793;15794;15795;15796;15797;15798;15799;15800;15801;15802;15803;15804;15805;15806;15807;15808;15809;15810 12499;12500;12501;12502;12503;12504;12505;12506;12507;12508 12504 9 AFSQSSDLTK Unmodified 1082.5244 0.52440364 1046 P17029 ZKSCAN1 Zinc finger protein with KRAB and SCAN domains 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 27.267 27.001 2 0.0027192 28994 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 80.787 58.401 110040000 0 57399000 0 0 6359300 0 0 0 4781900 0 9977800 6595800 9194400 8448700 7284500 1850 1046 1688 15811;15812;15813;15814;15815;15816;15817;15818 12509;12510;12511;12512 12511 4 AFSSPQEEEEAGFTGR Unmodified 1740.7591 0.75910761 2397 Q14241 TCEB3 Transcription elongation factor B polypeptide 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.22 2.2 1 8 1 1 1 1 1 1 1 1 1 53.823 53.127 2 1.4116E-20 61148 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 130.56 120.56 56847000 0 1348200 0 9033200 7512500 0 10369000 8505400 0 0 0 0 9326200 0 10753000 1851 2397 1689 15819;15820;15821;15822;15823;15824;15825;15826;15827 12513;12514;12515;12516;12517;12518;12519;12520 12519 7 AFSSPQEEEEAGFTGRR Unmodified 1896.8602 0.86021864 2397 Q14241 TCEB3 Transcription elongation factor B polypeptide 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.653 46.82 3 5.6165E-19 51652 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 101.53 98.389 178330000 0 0 0 7300300 9155200 13441000 13640000 11236000 9334700 19158000 18283000 21632000 16511000 13905000 24736000 1852 2397 1690 15828;15829;15830;15831;15832;15833;15834;15835;15836;15837;15838;15839 12521;12522;12523;12524;12525;12526;12527;12528;12529;12530;12531;12532;12533;12534 12524 14 AFSTVPLTPVPRPSDSVSSTPAATSTPSK Unmodified 2884.4818 0.48181712 5007 Q9ULV3 CIZ1 Cip1-interacting zinc finger protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.94 74.999 3 8.216E-22 86486 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 65.801 59.003 161030000 0 0 0 7980300 10868000 9996700 11258000 11069000 11180000 13965000 15733000 14980000 13186000 13161000 27658000 1853 5007 1691 15840;15841;15842;15843;15844;15845;15846;15847;15848;15849;15850;15851 12535;12536;12537;12538;12539;12540;12541;12542;12543;12544;12545;12546;12547 12536 13 AFSVFLFNTENK Unmodified 1415.7085 0.70851601 2356 Q13907 IDI1 Isopentenyl-diphosphate Delta-isomerase 1 yes yes 0 0 0 By MS/MS 10 0 1 1 88.106 88.256 2 0.039121 102049 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.08 24.322 7086700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7086700 1854 2356 1692 15852 12548 12548 1 AFSVNIFK Unmodified 924.5069 0.50690308 943 P11279 LAMP1 Lysosome-associated membrane glycoprotein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.191 78.251 2 0.015415 90381 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 68.915 25.915 147030000 0 0 0 23377000 6991200 10667000 6546600 15545000 8692600 12685000 11701000 14001000 11677000 10565000 14577000 1855 943 1693 15853;15854;15855;15856;15857;15858;15859;15860;15861;15862;15863;15864 12549;12550;12551;12552;12553;12554;12555;12556;12557;12558 12549 10 AFSYYGPLR Unmodified 1072.5342 0.53418046 2619 Q16629 SRSF7 Serine/arginine-rich splicing factor 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.269 66.354 2 0.0031138 75103 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 92.187 77.518 263140000 0 0 0 13169000 15032000 18297000 18028000 19316000 13180000 24850000 29789000 33086000 20817000 20264000 37307000 1856 2619 1694 15865;15866;15867;15868;15869;15870;15871;15872;15873;15874;15875;15876 12559;12560;12561;12562;12563;12564;12565;12566;12567;12568;12569;12570 12566 11 AFTCDDLFR Unmodified 1143.5019 0.50189405 1852 P61599 NAA20 N-alpha-acetyltransferase 20 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 70.233 70.441 2 0.0050681 80371 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 75.738 71.804 678740000 0 0 0 0 0 0 167360000 216890000 246060000 10019000 13716000 24693000 0 0 0 1857 1852 1695 15877;15878;15879;15880;15881;15882 12571;12572;12573;12574;12575 12572 4 AFTEAATGSSADFVK Unmodified 1500.7096 0.70963822 3970 Q96RL7 VPS13A Vacuolar protein sorting-associated protein 13A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 57.866 57.721 2 7.4767E-08 65667 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 90.913 77.298 47557000 0 0 0 5073700 9144100 0 6536200 16329000 0 0 0 0 0 10474000 0 1858 3970 1696 15883;15884;15885;15886;15887 12576;12577;12578;12579;12580 12577 5 AFTELQAK Unmodified 906.48108 0.48108226 446 O60925 PFDN1 Prefoldin subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 37.028 35.768 2 0.0024541 48889 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 124.34 67.24 1860700000 33324000 1692800000 21551000 0 2105000 3872900 4322200 2740800 2381400 4648800 19832000 16486000 0 12943000 43637000 1859 446 1697 15888;15889;15890;15891;15892;15893;15894;15895;15896;15897;15898;15899;15900;15901 12581;12582;12583;12584;12585;12586 12585 5 AFTFDDEDDELSQLK Unmodified 1771.7788 0.77884 4470 Q9H9C1 VIPAS39 Spermatogenesis-defective protein 39 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 83.629 78.976 2 0.00089817 98881 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.49 93.286 85019000 7949300 75547000 1522800 0 0 0 0 0 0 0 0 0 0 0 0 1860 4470 1698 15902;15903;15904;15905 12587;12588;12589 12587 3 AFTGEGQK Unmodified 836.40283 0.40283194 5046 Q9UNZ2 NSFL1C NSFL1 cofactor p47 yes yes 0 0 0 By matching By MS/MS 2.33 0.471 2 1 1 2 9.694 6.23 2 0.03028 8146 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 76.035 15.676 573250000 30701000 542550000 0 0 0 0 0 0 0 0 0 0 0 0 0 1861 5046 1699 15906;15907;15908 12590;12591 12591 1 AFTGIEDPVTK Unmodified 1176.6027 0.60265396 3666 Q92817 EVPL Envoplakin yes yes 0 0 0 By MS/MS By MS/MS 5 3.56 1 1 1 2 1 61.006 57.222 2 0.0021054 73207 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.65 78.293 67073000 0 61413000 0 5660700 0 0 0 0 0 0 0 0 0 0 0 1862 3666 1700 15909;15910;15911 12592;12593;12594 12592 3 AFTGREFDELNPSAQR Unmodified 1836.8755 0.87547477 1041 P16615 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 62.48 62.648 3 5.1625E-06 71470 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 78.244 66.771 119950000 0 0 0 0 5878000 9745800 7403200 15238000 9350200 9021000 11868000 13596000 11009000 10072000 16765000 1863 1041 1701 15912;15913;15914;15915;15916;15917;15918;15919;15920;15921;15922 12595;12596;12597;12598;12599;12600;12601;12602;12603;12604;12605;12606;12607;12608;12609 12605 15 AFTHTAQYDEAISDYFRK Unmodified 2162.0069 0.006882877 1307 P31939 ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes yes 0 0 1 By MS/MS By MS/MS 5.33 3.3 2 1 2 1 77.083 74.948 3;4 3.475E-06 90315 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 90.385 80.695 42518000 0 31200000 0 0 0 0 0 0 0 0 0 0 0 0 11318000 1864 1307 1702 15923;15924;15925 12610;12611;12612 12611 2 AFTNTATATEEDVK Unmodified 1496.6995 0.69946747 2745 Q5K651 SAMD9 Sterile alpha motif domain-containing protein 9 yes yes 0 0 0 By MS/MS By matching By MS/MS 7.33 3.77 1 2 1 1 1 40.105 38.45 2 5.7077E-31 48528 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 149.96 123.57 36802000 0 28538000 0 0 0 5057700 0 0 0 3206600 0 0 0 0 0 1865 2745 1703 15926;15927;15928 12613;12614 12614 2 AFTNYSSLNR Acetyl (Protein N-term) 1213.5728 0.57275081 5299 Q9Y6X9 MORC2 MORC family CW-type zinc finger protein 2 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 69.861 70.09 2 0.0044341 80928 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 58.981 38.079 15121000 0 0 0 0 0 0 3130300 3227300 0 0 0 0 3174000 0 5589700 1866 5299 1704 15929;15930;15931;15932 12615;12616;12617 12617 3 AFTPFSGPK Unmodified 950.48617 0.48616764 972 P12955 PEPD Xaa-Pro dipeptidase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 6.12 3.89 3 1 4 1 2 1 1 1 1 1 58.622 55.945 2 0.0078297 61642 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.379 35.499 333230000 165980000 109680000 29259000 0 0 0 1149800 0 0 0 5823400 0 0 5112300 16222000 1867 972 1705 15933;15934;15935;15936;15937;15938;15939;15940 12618;12619;12620;12621;12622;12623;12624 12619 6 AFTTTLNLLPYHK Unmodified 1517.8242 0.82421447 375 O43847 NRD1 Nardilysin yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 80.488 80.575 3 0.0023415 92778 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.555 45.673 44674000 0 0 0 0 648970 4005400 1208700 0 2785300 0 3855000 0 2731500 3308800 26130000 1868 375 1706 15941;15942;15943;15944;15945;15946;15947;15948 12625;12626 12625 2 AFTYINLDK Unmodified 1083.5601 0.56006086 762 P02786 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.844 68.924 2 0.013257 78173 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 60.074 43.11 147490000 0 0 0 6019300 9074000 10765000 11305000 12345000 8878400 16565000 13467000 19959000 10758000 11170000 17187000 1869 762 1707 15949;15950;15951;15952;15953;15954;15955;15956;15957;15958;15959;15960 12627;12628 12628 1 AFVAGVLPFK Unmodified 1047.6117 0.6117025 155 O00442 RTCA RNA 3'-terminal phosphate cyclase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 84.021 84.097 2 0.0081736 96986 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.682 50.771 41344000 0 0 0 0 3152600 3293500 0 6868900 0 5330900 0 5493700 2367600 3043700 11793000 1870 155 1708 15961;15962;15963;15964;15965;15966;15967;15968 12629;12630;12631;12632;12633;12634;12635 12631 7 AFVAIGDYNGHVGLGVK Unmodified 1715.8995 0.89950468 1027 P15880 RPS2 40S ribosomal protein S2 yes yes 0 0 0 By MS/MS 2 0 1 1 83.682 75.551 3 0.00011465 98731 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.47 62.219 9872000 9872000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1871 1027 1709 15969 12636 12636 1 AFVATQGATVVDQTTLMK Acetyl (Protein N-term);Oxidation (M) 1937.9768 0.9768283 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 19 1 2 2 1 2 2 2 1 1 1 2 2 85.37 85.443 2;3 1.6673E-54 98989 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 161.63 147.37 135140000 0 0 0 2635500 16043000 11912000 5424900 10294000 11260000 25946000 10468000 11859000 3549500 8582100 17163000 1872 5189 1710 15970;15971;15972;15973;15974;15975;15976;15977;15978;15979;15980;15981;15982;15983;15984;15985;15986;15987;15988 12637;12638;12639;12640;12641;12642;12643;12644;12645;12646;12647;12648 12638 6577 11 AFVATQGATVVDQTTLMK Acetyl (Protein N-term) 1921.9819 0.98191368 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 1 0 0 By MS/MS By MS/MS By MS/MS 7 4.24 1 2 1 1 1 95.38 97.241 2;3 1.8766E-39 105143 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 137.59 115.54 18564000 13644000 0 0 0 0 0 0 0 0 2649000 2271300 0 0 0 0 1873 5189 1710 15989;15990;15991 12649;12650;12651 12649 3 AFVDFLSDEIK Unmodified 1282.6445 0.64451877 2134 Q07021 C1QBP Complement component 1 Q subcomponent-binding protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.16 3.73 5 2 12 3 3 1 1 1 1 1 1 1 1 1 1 1 1 1 89.301 88.111 2 2.5835E-07 110065 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.07 118.85 873050000 219590000 500260000 31006000 1433700 2038400 3595600 2468800 6102000 3828100 9871700 11725000 13122000 4071500 11093000 52842000 1874 2134 1711 15992;15993;15994;15995;15996;15997;15998;15999;16000;16001;16002;16003;16004;16005;16006;16007;16008;16009;16010 12652;12653;12654;12655;12656;12657;12658;12659;12660;12661;12662;12663;12664;12665;12666 12655 15 AFVDFNEGEIK Unmodified 1267.6085 0.60846762 2066 Q01968 OCRL Inositol polyphosphate 5-phosphatase OCRL-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 72.463 72.511 2 0.0075505 82837 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.751 42.158 17153000 0 0 0 0 3707700 0 4377400 0 0 0 0 0 0 0 9067700 1875 2066 1712 16011;16012;16013;16014 12667;12668;12669;12670 12669 4 AFVDVVNGEYVPRK Unmodified 1591.8358 0.83584179 582 O94763 URI1 Unconventional prefoldin RPB5 interactor 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 67.335 67.556 3 0.0018853 76706 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 29.467 23.386 45873000 0 0 0 0 0 4945200 3389400 3634300 0 6221700 3709600 7363800 2392200 4327000 9889700 1876 582 1713 16015;16016;16017;16018;16019;16020;16021;16022;16023 12671;12672;12673;12674 12673 4 AFVEAQNK Unmodified 905.46068 0.46068117 1533 P48147 PREP Prolyl endopeptidase yes yes 0 0 0 By MS/MS By MS/MS 5 3.56 1 1 1 2 1 18.38 16.102 2 0.020506 20798 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.57 82.472 395770000 0 379480000 0 0 0 0 0 0 0 0 0 0 0 0 16294000 1877 1533 1714 16024;16025;16026 12675;12676;12677 12675 1 AFVELTK Unmodified 806.4538 0.45380487 653 O95394 PGM3 Phosphoacetylglucosamine mutase yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.3 2.1 1 9 1 1 1 1 1 1 1 1 1 1 46.839 46.645 2 0.029674 58347 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 94.407 52.905 97323000 0 25132000 0 0 0 8163400 2580000 3444600 0 4677800 11114000 11133000 3560800 7179400 20339000 1878 653 1715 16027;16028;16029;16030;16031;16032;16033;16034;16035;16036 12678;12679;12680 12679 3 AFVENYPQFK Unmodified 1241.6081 0.60807369 4612 Q9NRW7 VPS45 Vacuolar protein sorting-associated protein 45 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 66.009 65.649 2 0.011135 75126 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 54.776 45.188 119120000 0 66337000 0 2529500 2484300 4529200 2675800 4697900 2229100 5911500 7396400 6288900 3532600 4944800 5561600 1879 4612 1716 16037;16038;16039;16040;16041;16042;16043;16044;16045;16046;16047;16048;16049 12681;12682;12683;12684;12685;12686;12687;12688;12689;12690 12686 10 AFVESSK Unmodified 766.38612 0.38611924 1190 P25490;Q96MM3 YY1;ZFP42 Transcriptional repressor protein YY1;Zinc finger protein 42 homolog yes no 0 0 0 By MS/MS 3 0 1 1 14.274 10.807 2 0.051886 13627 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 76.035 44.976 17503000 0 17503000 0 0 0 0 0 0 0 0 0 0 0 0 0 1880 1190 1717 16050 12691 12691 1 AFVNVQK Unmodified 804.44939 0.4493882 3299 Q8N0T1 C8orf59 Uncharacterized protein C8orf59 yes yes 0 0 0 By MS/MS 3 0 1 1 34.547 30.005 2 0.046815 37436 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 77.944 49.69 7020100 0 7020100 0 0 0 0 0 0 0 0 0 0 0 0 0 1881 3299 1718 16051 12692 12692 1 AFVPAILFK Unmodified 1004.6059 0.60588884 4490 Q9HAU5 UPF2 Regulator of nonsense transcripts 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 88.907 88.978 2 0.015568 103387 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.281 46.212 58871000 0 0 0 3029600 2553700 6808900 3412700 4262500 3818100 6309800 4024600 4912000 4098300 4361100 11280000 1882 4490 1719 16052;16053;16054;16055;16056;16057;16058;16059;16060;16061;16062;16063 12693;12694;12695;12696;12697;12698 12698 6 AFVQFVFDNK Unmodified 1213.6132 0.61315906 2278 Q13395 TARBP1 Probable methyltransferase TARBP1 yes yes 0 0 0 By MS/MS 2 0 1 1 89.109 80.978 2 0.030967 105320 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.42 40.992 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1883 2278 1720 16064 12699 12699 1 AFVRPSGTEDVVR Unmodified 1431.747 0.74702678 653 O95394 PGM3 Phosphoacetylglucosamine mutase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 42.421 42.742 3 0.00042641 46736 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.102 51.168 179700000 0 0 0 0 0 23455000 0 16359000 0 23466000 50322000 0 9739800 0 56354000 1884 653 1721 16065;16066;16067;16068;16069;16070 12700;12701;12702;12703;12704;12705 12702 5 AFVSMVYSEEGAEDRTFAR Oxidation (M) 2179.9844 0.98443288 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 66.077 66.184 3 5.3869E-05 75959 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 57.52 54.422 18534000 0 0 0 0 0 9120700 0 0 4647100 0 0 0 0 4766200 0 1885 2431 1722 16071;16072;16073 12706 12706 3991 1 AFYPEEISSMVLTK Oxidation (M) 1629.796 0.79601039 908 P0DMV9;P0DMV8 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.77 3.54 13 3 40 2 9 5 3 4 4 4 3 2 2 4 4 3 3 4 82.204 81.184 2;3 5.3923E-24 101329 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.71 122.62 11184000000 249530000 7948700000 414450000 57435000 128910000 186010000 133610000 123050000 59567000 153840000 349020000 360820000 115360000 189580000 713690000 1886 908 1723 16074;16075;16076;16077;16078;16079;16080;16081;16082;16083;16084;16085;16086;16087;16088;16089;16090;16091;16092;16093;16094;16095;16096;16097;16098;16099;16100;16101;16102;16103;16104;16105;16106;16107;16108;16109;16110;16111;16112;16113;16114;16115;16116;16117;16118;16119;16120;16121;16122;16123;16124;16125;16126;16127;16128;16129 12707;12708;12709;12710;12711;12712;12713;12714;12715;12716;12717;12718;12719;12720;12721;12722;12723;12724;12725;12726;12727;12728;12729;12730;12731;12732;12733;12734;12735;12736;12737;12738;12739;12740;12741;12742;12743;12744;12745;12746;12747;12748;12749;12750;12751;12752 12717 1168 38 AFYPEEISSMVLTK Unmodified 1613.8011 0.80109577 908 P0DMV9;P0DMV8 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.09 3.86 2 8 2 21 3 7 2 1 2 2 1 2 2 2 2 2 1 2 2 90.636 89.386 2;3 2.8066E-29 110053 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.75 111.43 13485000000 642600000 12184000000 199330000 1962400 7306900 9831100 4248900 14542000 9682900 29835000 35449000 31044000 4077100 33920000 276810000 1887 908 1723 16130;16131;16132;16133;16134;16135;16136;16137;16138;16139;16140;16141;16142;16143;16144;16145;16146;16147;16148;16149;16150;16151;16152;16153;16154;16155;16156;16157;16158;16159;16160;16161;16162 12753;12754;12755;12756;12757;12758;12759;12760;12761;12762;12763;12764;12765;12766;12767;12768;12769;12770;12771;12772;12773;12774;12775;12776;12777;12778;12779;12780;12781;12782;12783;12784 12758 29 AFYVNVLNEEQR Unmodified 1480.731 0.73104237 768 P04040 CAT Catalase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 75.979 75.824 2 0.0040572 87493 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 58.699 42.475 8873200 0 0 0 3161700 0 0 0 5711500 0 0 0 0 0 0 0 1888 768 1724 16163;16164;16165 12785;12786;12787 12785 3 AFYVNVLNEEQRK Unmodified 1608.826 0.82600539 768 P04040 CAT Catalase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.125 67.207 3 0.0001668 76983 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 78.705 72.606 80551000 0 0 0 6427100 3067900 5867600 3351900 11644000 6572100 8264500 3894700 11241000 6148900 4578800 9492500 1889 768 1725 16166;16167;16168;16169;16170;16171;16172;16173;16174;16175;16176;16177 12788;12789;12790;12791;12792;12793;12794;12795;12796;12797;12798 12789 11 AFYVPAQYVK Unmodified 1184.623 0.62299547 3248 Q8IWW6 ARHGAP12 Rho GTPase-activating protein 12 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 71.397 71.481 2 0.0073584 81570 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.659 47.989 16986000 0 0 0 0 1664400 0 2171400 0 0 3856800 0 0 0 3285500 6007800 1890 3248 1726 16178;16179;16180;16181;16182 12799;12800;12801 12801 3 AGAAAGDSDEESRADDK Unmodified 1663.6922 0.69215026 647 O95365 ZBTB7A Zinc finger and BTB domain-containing protein 7A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 6.9931 6.575 3 3.1681E-38 3887 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 139 135.38 226200000 0 11038000 0 16668000 13685000 16552000 16532000 9498300 9955000 27794000 0 17567000 29044000 22270000 35596000 1891 647 1727 16183;16184;16185;16186;16187;16188;16189;16190;16191;16192;16193;16194;16195;16196 12802;12803;12804;12805;12806;12807;12808;12809;12810;12811;12812;12813;12814;12815 12811 14 AGAAGGPEEEAEK Unmodified 1214.5415 0.54151026 3570 Q8WW12 PCNP PEST proteolytic signal-containing nuclear protein yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.532 11.652 2 0.00077991 10715 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 72.321 68.208 113820000 0 0 0 3003200 3295600 11124000 4739000 3434900 8886100 8948000 0 20138000 7896100 13534000 28825000 1892 3570 1728 16197;16198;16199;16200;16201;16202;16203;16204;16205;16206;16207 12816;12817;12818;12819;12820;12821 12820 5 AGAAGGPEEEAEKPVK Unmodified 1538.7577 0.75765105 3570 Q8WW12 PCNP PEST proteolytic signal-containing nuclear protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.21 2.31 1 1 17 2 1 2 1 1 1 1 1 2 2 1 2 2 20.852 20.576 2;3 1.8294E-27 20164 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 127.57 113.85 950930000 0 19209000 0 47638000 55437000 25344000 56652000 56663000 36735000 57061000 101300000 190630000 65809000 65722000 172740000 1893 3570 1729 16208;16209;16210;16211;16212;16213;16214;16215;16216;16217;16218;16219;16220;16221;16222;16223;16224;16225;16226 12822;12823;12824;12825;12826;12827;12828;12829;12830;12831;12832;12833;12834;12835;12836;12837;12838;12839;12840;12841;12842;12843;12844;12845;12846;12847;12848 12829 26 AGAAPTTAFGQAVIGPPGSGK Acetyl (Protein N-term) 1895.9741 0.97412619 4478 Q9H9Y4 GPN2 GPN-loop GTPase 2 yes yes 1 0 0 By MS/MS 10 0 1 1 83.082 83.256 2 0.0024717 96250 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 59.185 53.461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1894 4478 1730 16227 12849 12849 1 AGAAPVAPEK Unmodified 909.49198 0.4919813 3693 Q92974 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.071 16.247 2 0.0015959 15797 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 93.649 71.157 659810000 0 0 0 28496000 26345000 38961000 52235000 33866000 40762000 55201000 77738000 92159000 72425000 74026000 67592000 1895 3693 1731 16228;16229;16230;16231;16232;16233;16234;16235;16236;16237;16238;16239 12850;12851;12852;12853;12854;12855;12856;12857;12858;12859;12860;12861;12862;12863;12864;12865 12861 15 AGAAPYVQAFDSLLAGPVAEYLK Unmodified 2350.2209 0.2208984 2055 Q01518 CAP1 Adenylyl cyclase-associated protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 102.35 98.241 3 2.2948E-38 121569 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.35 51.652 34465000 0 34465000 0 0 0 0 0 0 0 0 0 0 0 0 0 1896 2055 1732 16240;16241 12866;12867 12867 2 AGAASPLNSPLSSAVPSLGK Unmodified 1822.9789 0.97887721 566 O75962 TRIO Triple functional domain protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 81.619 81.672 2 5.3242E-05 94545 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 54.276 47.616 45728000 0 0 0 1713700 3206800 4021700 4002100 3199100 3643600 6830100 5392500 0 4526400 3214700 5977100 1897 566 1733 16242;16243;16244;16245;16246;16247;16248;16249;16250;16251;16252 12868;12869;12870;12871;12872;12873;12874;12875;12876 12868 9 AGAATQASLESAPR Acetyl (Protein N-term) 1370.679 0.6790068 4231 Q9BXR0 QTRT1 Queuine tRNA-ribosyltransferase yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 53.027 52.933 2 1.0384E-16 60411 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 118.9 101.47 36975000 0 0 0 5130800 4316500 0 5292200 5457400 4478000 0 0 0 0 12300000 0 1898 4231 1734 16253;16254;16255;16256;16257;16258 12877;12878;12879;12880;12881;12882;12883;12884 12884 8 AGADEERAETAR Unmodified 1274.5851 0.58510641 1980 P78371 CCT2 T-complex protein 1 subunit beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 27 2 2 2 2 4 2 3 2 2 2 2 2 7.1075 7.2355 2;3 1.7128E-203 4627 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 240.37 213.93 6145700000 0 0 0 201310000 218940000 473280000 392230000 331830000 324460000 519610000 872770000 580740000 530570000 536140000 1163800000 1899 1980 1735 16259;16260;16261;16262;16263;16264;16265;16266;16267;16268;16269;16270;16271;16272;16273;16274;16275;16276;16277;16278;16279;16280;16281;16282;16283;16284;16285 12885;12886;12887;12888;12889;12890;12891;12892;12893;12894;12895;12896;12897;12898;12899;12900 12888 13 AGAEDDEEK Unmodified 962.38288 0.38288436 3167 Q86VM9 ZC3H18 Zinc finger CCCH domain-containing protein 18 yes yes 0 0 0 By MS/MS 1 0 1 1 106.62 111.88 2 0.032081 92631 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 65.465 3.7865 15068000 15068000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1900 3167 1736 16286 12901 12901 1 AGAEGAAGRQSELEPVVSLVDVLEEDEELENEACAVLGGSDSEK Acetyl (Protein N-term) 4599.1294 0.12938496 3367 Q8N806 UBR7 Putative E3 ubiquitin-protein ligase UBR7 yes yes 1 0 1 By MS/MS 2 0 1 1 103.4 95.27 4 1.9E-44 122482 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.781 68.664 19845000 19845000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1901 3367 1737 16287 12902;12903 12903 2 AGAEGFVR Unmodified 805.40825 0.40825167 4167 Q9BUP3 HTATIP2 Oxidoreductase HTATIP2 yes yes 0 0 0 By MS/MS 10 0 1 1 25.837 26.185 2 0.039601 27955 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 81.784 42.566 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1902 4167 1738 16288 12904 12904 1 AGAFDQLK Unmodified 848.43922 0.43921744 1826 P61011 SRP54 Signal recognition particle 54 kDa protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 37.618 37.707 2 0.0047759 41878 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 113.7 71.221 733050000 0 0 0 46471000 63793000 76962000 78649000 88372000 61386000 0 0 116580000 122930000 77909000 0 1903 1826 1739 16289;16290;16291;16292;16293;16294;16295;16296;16297 12905;12906;12907;12908;12909;12910;12911 12908 5 AGAFPPPAIPSAPGSQAR Unmodified 1690.8791 0.87910359 5293 Q9Y6R0 NUMBL Numb-like protein yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.911 71.98 2 0.0083402 82964 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 44.616 38.512 47638000 0 0 0 2159900 3140300 3393300 4391500 4815500 2824300 4151200 4260000 3742500 4053400 5251600 5454900 1904 5293 1740 16298;16299;16300;16301;16302;16303;16304;16305;16306;16307;16308;16309 12912 12912 1 AGAGAPELLR Unmodified 953.52943 0.52942943 2042 Q00653 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 44.903 45.187 2 0.011018 50620 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 54.982 30.827 64153000 0 0 0 0 0 8305700 7296200 7308500 0 11898000 9941300 11508000 7895400 0 0 1905 2042 1741 16310;16311;16312;16313;16314;16315;16316 12913;12914;12915;12916 12915 3 AGAGGGNDIQWCFSQVK Acetyl (Protein N-term) 1835.8261 0.82608174 1941 P63151 PPP2R2A Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 83.068 83.12 2 1.1216E-25 96251 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 109.24 99.803 23640000 0 0 0 0 3070400 5287700 0 0 2334100 7880000 0 0 0 0 5067600 1906 1941 1742 16317;16318;16319;16320;16321;16322 12917;12918;12919;12920;12921 12918 5 AGAGLGDGERK Unmodified 1029.5203 0.52032131 4230 Q9BXP5 SRRT Serrate RNA effector molecule homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 6.8454 6.9249 2 0.004411 4424 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.95 33.195 35067000 0 0 0 2765300 3807700 4304200 4326100 0 4415500 4819900 0 0 4477100 0 6151000 1907 4230 1743 16323;16324;16325;16326;16327;16328;16329;16330 12922;12923;12924;12925;12926 12925 5 AGAGMITQHSSNASPINR Unmodified 1810.8744 0.87442892 4697 Q9NWH9 SLTM SAFB-like transcription modulator yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 37.252 37.434 3 1.2632E-05 41363 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 70.96 67.066 92619000 0 0 0 9890400 8187200 8661900 0 0 7490700 14551000 11068000 13744000 6832900 0 12193000 1908 4697 1744 16331;16332;16333;16334;16335;16336;16337;16338;16339 12927;12928;12929;12930;12931;12932;12933;12934;12935 12928 8 AGAGMITQHSSNASPINR Oxidation (M) 1826.8693 0.86934354 4697 Q9NWH9 SLTM SAFB-like transcription modulator yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By matching 10 0 5 1 1 1 1 1 28.364 28.443 3 2.1347E-05 30552 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 63.918 52.638 37034000 0 0 0 0 7166800 0 7465800 0 5038600 8623400 8739800 0 0 0 0 1909 4697 1744 16340;16341;16342;16343;16344 12936;12937;12938 12936 6098 3 AGAGPAPGLPGAGGPVVPGPGAGIPGK Acetyl (Protein N-term) 2217.1906 0.19060132 4141 Q9BTD8 RBM42 RNA-binding protein 42 yes yes 1 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching 9.25 2.49 1 11 1 1 1 1 1 2 1 1 1 1 1 87.185 87.679 2;3 4.1037E-21 99038 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 66.285 59.246 262120000 8452600 0 0 4294800 4730800 0 6513600 0 57545000 65797000 75598000 15005000 7252900 7402400 9526700 1910 4141 1745 16345;16346;16347;16348;16349;16350;16351;16352;16353;16354;16355;16356 12939;12940;12941;12942;12943;12944;12945 12941 7 AGAGPTMLLR Acetyl (Protein N-term) 1027.5485 0.54845032 4105 Q9BRA0 NAA38 N-alpha-acetyltransferase 38, NatC auxiliary subunit yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 79.567 79.683 2 0.00090642 92110 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 79.906 66.918 46318000 0 0 0 0 0 2492400 0 0 0 9218900 14112000 20494000 0 0 0 1911 4105 1746 16357;16358;16359;16360 12946;12947;12948;12949 12948 4 AGAGSAAVSGAGTPVAGPTGR Acetyl (Protein N-term) 1752.8755 0.87547477 639 O95295 SNAPIN SNARE-associated protein Snapin yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.549 55.675 2 1.2763E-72 63239 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 198.33 183.64 278800000 0 0 0 15162000 17783000 20243000 17465000 19142000 14758000 26307000 31700000 43574000 21614000 19096000 31955000 1912 639 1747 16361;16362;16363;16364;16365;16366;16367;16368;16369;16370;16371;16372 12950;12951;12952;12953;12954;12955;12956;12957;12958;12959;12960;12961 12950 12 AGAGVPGEQPVDLNLPLEAPPISK Unmodified 2368.2638 0.26382585 3226 Q8IVF2 AHNAK2 Protein AHNAK2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 89.795 89.048 3 1.6293E-11 109877 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 49.765 42.053 43104000 0 28445000 0 0 2298000 0 1220800 2261800 0 3751400 0 0 0 0 5127000 1913 3226 1748 16373;16374;16375;16376;16377;16378 12962;12963;12964;12965 12963 4 AGAHLQGGAK Unmodified 908.48281 0.48281359 782 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.2 3.43 21 5 9 13 7 6 1 1 1 1 1 1 1 1 1 8.7192 6.4059 2 7.453E-13 5365 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 183.26 111.12 95300000000 51077000000 34066000000 10151000000 1030100 0 0 445270 444910 280370 204290 1553900 1266800 270950 875580 0 1914 782 1749 16379;16380;16381;16382;16383;16384;16385;16386;16387;16388;16389;16390;16391;16392;16393;16394;16395;16396;16397;16398;16399;16400;16401;16402;16403;16404;16405;16406;16407;16408;16409;16410;16411;16412;16413 12966;12967;12968;12969;12970;12971;12972;12973;12974;12975;12976;12977;12978;12979;12980;12981;12982;12983;12984;12985;12986;12987;12988;12989;12990;12991;12992;12993;12994;12995;12996;12997;12998 12967 28 AGAHSVYACELSK Unmodified 1391.6503 0.65034921 2929 Q6P2P2 PRMT9 Putative protein arginine N-methyltransferase 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 36.58 31.746 3 0.0038487 44063 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.042 42.785 88783000 53798000 17206000 17779000 0 0 0 0 0 0 0 0 0 0 0 0 1915 2929 1750 16414;16415;16416;16417 12999;13000;13001 13000 3 AGAIAPCEVTVPAQNTGLGPEK Unmodified 2179.0943 0.094317676 808 P05388;Q8NHW5 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.26 2.27 2 1 28 3 2 3 2 2 3 2 2 2 2 2 3 3 72.106 71.731 2;3 3.0454E-72 81905 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 129.2 125.91 1669100000 0 81420000 0 67162000 94796000 102530000 86626000 92980000 58160000 148960000 162230000 167100000 178080000 200720000 228300000 1916 808 1751 16418;16419;16420;16421;16422;16423;16424;16425;16426;16427;16428;16429;16430;16431;16432;16433;16434;16435;16436;16437;16438;16439;16440;16441;16442;16443;16444;16445;16446;16447;16448 13002;13003;13004;13005;13006;13007;13008;13009;13010;13011;13012;13013;13014;13015;13016;13017;13018;13019 13013 14 AGAIIENMSTK Unmodified 1133.5751 0.575059 2787 Q5T9L3 WLS Protein wntless homolog yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 2 1 1 1 42.151 42.336 2 0.01913 46601 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 58.246 43.308 49937000 0 0 0 5674400 3083000 7990900 0 0 0 7865100 10036000 8041300 2587000 0 4659100 1917 2787 1752 16449;16450;16451;16452;16453;16454;16455;16456;16457 13020;13021 13021 2 AGAISASGPELQGAGHSK Unmodified 1636.8169 0.81689726 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 34.404 34.587 2;3 1.3036E-37 36783 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 97.095 88.711 1064200000 0 0 0 56416000 45178000 68576000 69820000 86175000 61845000 76595000 135190000 123330000 110470000 84629000 145980000 1918 2172 1753 16458;16459;16460;16461;16462;16463;16464;16465;16466;16467;16468;16469;16470;16471;16472;16473;16474;16475;16476;16477;16478;16479;16480;16481 13022;13023;13024;13025;13026;13027;13028;13029;13030;13031;13032;13033;13034;13035;13036;13037;13038;13039 13027 17 AGAKPDQIGIITPYEGQR Unmodified 1913.0007 0.0006752871 3683 Q92900 UPF1 Regulator of nonsense transcripts 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.731 64.819 3 3.2804E-05 73431 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.705 51.077 188290000 0 0 0 7214800 8373600 13301000 14186000 12849000 9984700 16634000 18700000 20160000 16110000 18858000 31915000 1919 3683 1754 16482;16483;16484;16485;16486;16487;16488;16489;16490;16491;16492;16493 13040;13041;13042;13043;13044;13045;13046;13047;13048;13049;13050;13051;13052 13044 13 AGALAGLAAGLQVPR Acetyl (Protein N-term) 1405.8041 0.80414773 4535 Q9NP71 MLXIPL Carbohydrate-responsive element-binding protein yes yes 1 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 97.165 97.306 2 1.7477E-35 112974 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 152.28 134.8 9244700 0 0 0 0 0 0 0 0 0 2491100 1723500 1606800 0 0 3423300 1920 4535 1755 16494;16495;16496;16497 13053;13054;13055 13054 3 AGALNSNDAFVLK Unmodified 1318.6881 0.68811492 819 P06396;CON__Q3SX14 GSN Gelsolin yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68.03 67.47 2 2.1179E-08 76968 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 134.25 107.86 + 543540000 0 187980000 2039100 40481000 21479000 27859000 27203000 26178000 16645000 28314000 31205000 42553000 32872000 27048000 31691000 1921 819 1756 16498;16499;16500;16501;16502;16503;16504;16505;16506;16507;16508;16509;16510;16511 13056;13057;13058;13059;13060;13061;13062;13063;13064;13065;13066;13067;13068;13069;13070;13071 13069 16 AGALQCSPSDAYTK Unmodified 1467.6664 0.6663932 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36.045 35.373 2 6.2926E-15 43726 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.27 104.61 330780000 9759500 198560000 0 4917200 4621300 11302000 5135100 4185600 6513600 11195000 12678000 12052000 17151000 14186000 18523000 1922 5187 1757 16512;16513;16514;16515;16516;16517;16518;16519;16520;16521;16522;16523;16524;16525 13072;13073;13074;13075;13076;13077;13078;13079;13080;13081 13075 10 AGALQVCPTDSYTK Unmodified 1509.7133 0.71334339 5201 Q9Y4G6 TLN2 Talin-2 yes yes 0 0 0 By MS/MS 2 0 1 1 53.419 47.626 2 0.0010718 61713 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.29 114.01 18439000 0 18439000 0 0 0 0 0 0 0 0 0 0 0 0 0 1923 5201 1758 16526 13082 13082 1 AGANITPR Unmodified 798.4348 0.43480077 1710 P53350 PLK1 Serine/threonine-protein kinase PLK1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 14.294 14.425 2 0.030437 13546 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 55.531 20.706 32048000 0 0 0 3102400 4799100 0 4578100 0 3635600 0 0 5309400 6127300 0 4496700 1924 1710 1759 16527;16528;16529;16530;16531;16532;16533 13083;13084;13085;13086;13087 13084 5 AGAPGALSPSYDGGLHGLQSK Unmodified 1981.9858 0.9857535 1028 P15923 TCF3 Transcription factor E2-alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 62.437 62.543 3 1.3158E-05 70770 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.339 48.681 92126000 0 0 0 3960600 5297000 0 8494400 7085500 4932000 10027000 10877000 7768300 6482200 9654400 17548000 1925 1028 1760 16534;16535;16536;16537;16538;16539;16540;16541;16542;16543;16544 13088;13089;13090;13091;13092;13093;13094;13095;13096;13097;13098;13099 13091 12 AGAPLPVPR Unmodified 876.51814 0.51813647 3685 Q92908 GATA6 Transcription factor GATA-6 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.358 48.52 2 0.019171 54070 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 54.205 33.65 247690000 0 0 0 11551000 11278000 14312000 21108000 18088000 17434000 22677000 30678000 27737000 23927000 21175000 27729000 1926 3685 1761 16545;16546;16547;16548;16549;16550;16551;16552;16553;16554;16555;16556 13100;13101;13102;13103;13104;13105;13106;13107 13106 7 AGATAAASEIK Unmodified 988.51892 0.51892433 1028 P15923 TCF3 Transcription factor E2-alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 1 1 2 21.24 21.477 2 7.816E-05 21794 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 111.61 79.479 259520000 0 0 0 16109000 13421000 23899000 19074000 14128000 17272000 17683000 23933000 24624000 18852000 19317000 51205000 1927 1028 1762 16557;16558;16559;16560;16561;16562;16563;16564;16565;16566;16567;16568;16569 13108;13109;13110;13111;13112;13113;13114;13115;13116;13117;13118;13119 13117 8 AGATVYITGR Unmodified 1007.54 0.53999412 3920 Q96LJ7 DHRS1 Dehydrogenase/reductase SDR family member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 39.72 39.901 2 0.0070538 43802 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 63.397 42.45 46215000 0 0 0 5125800 3599800 4605700 0 0 0 5744400 5969600 8617000 0 4047900 8504500 1928 3920 1763 16570;16571;16572;16573;16574;16575;16576;16577 13120 13120 1 AGAVSALAK Unmodified 786.45995 0.45995289 5267 Q9Y678 COPG1 Coatomer subunit gamma-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 1 2 2 2 2 2 2 2 2 2 1 22.883 23.111 2 0.021188 23653 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 52.482 18.479 434720000 0 0 0 13096000 10065000 38943000 30881000 23284000 16238000 42469000 62445000 67937000 55057000 59835000 14469000 1929 5267 1764 16578;16579;16580;16581;16582;16583;16584;16585;16586;16587;16588;16589;16590;16591;16592;16593;16594;16595;16596;16597;16598 13121;13122;13123 13122 3 AGAVTSTPNRNSSK Unmodified 1388.7008 0.70080487 5002 Q9ULR3 PPM1H Protein phosphatase 1H yes yes 0 0 1 By MS/MS By matching 2 0 2 1 1 7.7096 4.7767 3 0.00057376 8242 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.438 55.407 16858000 15241000 0 1617100 0 0 0 0 0 0 0 0 0 0 0 0 1930 5002 1765 16599;16600 13124 13124 1 AGAYDFPSPEWDTVTPEAK Unmodified 2079.9426 0.94255129 2315;2316 Q13555;Q13554;Q9UQM7;Q13557 CAMK2G;CAMK2B;CAMK2A;CAMK2D Calcium/calmodulin-dependent protein kinase type II subunit gamma;Calcium/calmodulin-dependent protein kinase type II subunit beta;Calcium/calmodulin-dependent protein kinase type II subunit alpha;Calcium/calmodulin-dependent protein kinase type II subunit delta no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 83.111 82.593 2 1.5824E-05 95497 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.386 67.78 502460000 0 405710000 0 2004400 5388700 10961000 5475000 8195300 8293100 9197600 12028000 11106000 6005500 6952400 11134000 1931 2315;2316 1766 16601;16602;16603;16604;16605;16606;16607;16608;16609;16610;16611;16612;16613;16614 13125;13126;13127;13128;13129;13130;13131;13132 13126 7 AGCAVTSLLASELTK Unmodified 1519.7916 0.79159371 417 O60610 DIAPH1 Protein diaphanous homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.65 3.65 5 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 86.428 85.208 2;3 5.2717E-05 99196 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 88.441 82.057 735480000 290250000 221930000 21987000 3331100 13900000 14940000 11003000 13969000 14409000 23842000 19062000 23077000 6905800 18784000 38090000 1932 417 1767 16615;16616;16617;16618;16619;16620;16621;16622;16623;16624;16625;16626;16627;16628;16629;16630;16631 13133;13134;13135;13136;13137;13138;13139;13140;13141;13142;13143;13144;13145;13146;13147;13148;13149;13150 13146 18 AGCDEIWEK Unmodified 1106.4703 0.47025958 2748;2888 Q6IN85;Q5MIZ7 SMEK1;SMEK2 Serine/threonine-protein phosphatase 4 regulatory subunit 3A;Serine/threonine-protein phosphatase 4 regulatory subunit 3B no no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 41.681 41.877 2 0.045538 45697 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 43.185 33.944 31456000 0 0 0 0 1487700 3627100 2543300 0 1977400 0 5254700 0 5755400 3612300 7198400 1933 2888;2748 1768 16632;16633;16634;16635;16636;16637;16638;16639 13151 13151 1 AGCECLNESDEHGFDNCLRK Unmodified 2409.9736 0.97362697 324 O43396 TXNL1 Thioredoxin-like protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 48.658 44.756 4 6.3467E-18 56218 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 105.38 104.19 32737000 0 0 32737000 0 0 0 0 0 0 0 0 0 0 0 0 1934 324 1769 16640 13152 13152 1 AGDAFGDTSFLNSK Unmodified 1428.6521 0.65212334 4383 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.941 70.018 2 2.8293E-20 80398 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 143 138.05 705470000 0 0 0 30117000 38756000 43309000 47348000 45943000 42941000 66197000 119010000 76040000 57764000 55217000 82828000 1935 4383 1770 16641;16642;16643;16644;16645;16646;16647;16648;16649;16650;16651;16652 13153;13154;13155;13156;13157;13158;13159;13160;13161;13162;13163;13164;13165 13155 12 AGDAGIFVSR Unmodified 991.50869 0.50869399 2381 Q14160 SCRIB Protein scribble homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 45.601 45.755 2 0.0013948 51422 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 106.88 65.305 126550000 0 0 0 9575700 11076000 13022000 0 10551000 9593200 18515000 18627000 14780000 0 0 20807000 1936 2381 1771 16653;16654;16655;16656;16657;16658;16659;16660;16661 13166;13167;13168;13169;13170;13171;13172;13173 13167 7 AGDDTPVGYSVPIK Unmodified 1417.7089 0.70890994 4900 Q9UHF7 TRPS1 Zinc finger transcription factor Trps1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 64.173 63.366 2 0.0046589 73080 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 76.143 60.992 40825000 0 10745000 0 0 3331300 5933800 3334900 4289800 0 5795400 7394800 0 0 0 0 1937 4900 1772 16662;16663;16664;16665;16666;16667;16668;16669;16670;16671 13174;13175;13176;13177;13178;13179;13180;13181;13182 13181 8 AGDDYEVLELDDVPK Unmodified 1676.7781 0.77811172 301 O43164 PJA2 E3 ubiquitin-protein ligase Praja-2 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 80.09 80.188 2 0.0012817 92379 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.435 61.722 35826000 0 0 0 0 2020200 2705500 0 2753700 2402000 3051200 2981200 5661400 2906200 2600400 8744500 1938 301 1773 16672;16673;16674;16675;16676;16677;16678;16679;16680;16681 13183;13184;13185 13183 3 AGDILSGDQDK Unmodified 1117.5251 0.52513192 2429 Q14678 KANK1 KN motif and ankyrin repeat domain-containing protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 26.603 26.774 2 0.00074428 28764 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 77.533 56.005 62972000 0 0 0 7013600 4531500 0 6092300 0 6649400 8662200 7590300 0 6991900 6313900 9127200 1939 2429 1774 16682;16683;16684;16685;16686;16687;16688;16689;16690 13186;13187;13188;13189;13190;13191;13192 13187 7 AGDITELK Unmodified 845.44945 0.44944778 3835 Q96F86 EDC3 Enhancer of mRNA-decapping protein 3 yes yes 0 0 0 By MS/MS 10 0 1 1 29.787 29.922 2 0.049549 32285 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 47.082 12.258 8021800 0 0 0 0 0 0 0 0 8021800 0 0 0 0 0 0 1940 3835 1775 16691 13193 13193 1 AGDKDDITEPAVCALR Unmodified 1729.8305 0.83049842 1010 P14923 JUP Junction plakoglobin yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 56.254 56.257 2;3 2.0843E-20 64628 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 78.081 67.313 185490000 0 0 0 125950000 12536000 0 8708900 9857000 5732300 14108000 0 0 0 0 8595200 1941 1010 1776 16692;16693;16694;16695;16696;16697;16698;16699 13194;13195;13196;13197;13198;13199;13200 13200 6 AGDLANELVR Unmodified 1056.5564 0.55637247 2854 Q68CZ2 TNS3 Tensin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 53.676 53.842 2 0.0023779 61043 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 84.213 46.126 94167000 0 0 0 0 5141300 13163000 6165800 5396200 6301500 14000000 7660300 0 11856000 9693500 14790000 1942 2854 1777 16700;16701;16702;16703;16704;16705;16706;16707;16708;16709;16710 13201;13202;13203;13204;13205;13206;13207;13208;13209;13210;13211 13201 11 AGDLLEDSPK Unmodified 1043.5135 0.5135046 1674 P51858 HDGF Hepatoma-derived growth factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 38.764 38.944 2 0.003478 43121 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 76.345 49.344 239860000 0 0 0 10586000 12239000 5225000 7912900 12137000 5167500 11080000 49448000 30954000 11054000 27205000 56853000 1943 1674 1778 16711;16712;16713;16714;16715;16716;16717;16718;16719;16720;16721;16722;16723 13212;13213;13214;13215;13216;13217;13218;13219;13220;13221;13222;13223;13224 13213 11 AGDMENAENILTVMR 2 Oxidation (M) 1694.7604 0.76036994 1464 P42704 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 60.927 60.835 2 0.00042393 69590 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 55.401 37.592 17263000 0 0 0 3208800 0 3921500 4824200 0 0 0 0 0 0 5308200 0 1944 1464 1779 16724;16725;16726;16727 13225 13225 2295;2296 1 AGDNILAVLK Unmodified 1012.5917 0.59169534 3070 Q7Z2K6 ERMP1 Endoplasmic reticulum metallopeptidase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 79.418 79.443 2 0.0024208 91728 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 83.783 60.354 39000000 0 0 0 6765300 4258800 0 5565500 8096700 2672000 0 0 0 0 5112300 6529000 1945 3070 1780 16728;16729;16730;16731;16732;16733;16734;16735;16736;16737 13226;13227;13228;13229;13230;13231;13232;13233;13234;13235 13231 10 AGDNIPEEQPVASTPTTVSDGENKK Unmodified 2583.23 0.23001911 5136 Q9Y320 TMX2 Thioredoxin-related transmembrane protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 48.556 48.234 3 0.0003396 55210 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 30.306 16.851 13434000 0 0 0 4799100 3669800 0 0 4965700 0 0 0 0 0 0 0 1946 5136 1781 16738;16739;16740 13236;13237;13238 13237 3 AGDQLVPDNLK Unmodified 1168.6088 0.60880197 2484 Q15042 RAB3GAP1 Rab3 GTPase-activating protein catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 52.189 52.735 2 0.00026893 59961 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 91.087 79.451 97340000 0 0 0 0 0 0 0 0 0 0 0 17426000 40036000 0 39879000 1947 2484 1782 16741;16742;16743;16744;16745;16746;16747;16748 13239;13240;13241;13242;13243;13244;13245;13246 13245 8 AGDRGDRLER Unmodified 1143.5745 0.57448215 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 2 By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 13 1 1 1 2 1 1 1 1 1 1 1 1 6.0844 6.1966 3 0.01164 3695 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 91.549 60.985 866510000 0 0 0 68260000 66357000 72227000 87684000 71129000 84955000 57927000 61882000 82347000 68257000 54201000 91287000 1948 2102 1783 16749;16750;16751;16752;16753;16754;16755;16756;16757;16758;16759;16760;16761 13247;13248;13249;13250;13251;13252;13253 13253 5 AGDRLIEVNGVDLVGK Unmodified 1653.905 0.90498399 3521 Q8TEW0 PARD3 Partitioning defective 3 homolog yes yes 0 0 1 By MS/MS 2 0 1 1 77.802 75.111 3 0.044247 91371 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 21.708 13.175 2997100 0 0 2997100 0 0 0 0 0 0 0 0 0 0 0 0 1949 3521 1784 16762 13254 13254 0 AGDRQPEWLEEQQGR Unmodified 1797.8394 0.83942362 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 44.664 45.111 3 1.7019E-05 49798 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 61.641 56 55161000 0 0 0 0 0 0 0 0 5700500 0 10205000 9525700 8113200 6214500 15402000 1950 2459 1785 16763;16764;16765;16766;16767;16768;16769 13255;13256;13257;13258;13259;13260;13261 13259 7 AGDSEQTLQNHQQPNGGEPFLIGVSGGTASGK Unmodified 3180.5072 0.50719703 4277 Q9BZX2 UCK2 Uridine-cytidine kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 73.875 73.345 3 5.7116E-156 84423 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 166.45 160.79 861340000 0 63817000 0 33997000 45816000 65561000 46755000 64544000 67293000 97118000 110320000 87888000 60867000 45982000 71382000 1951 4277 1786 16770;16771;16772;16773;16774;16775;16776;16777;16778;16779;16780;16781;16782;16783 13262;13263;13264;13265;13266;13267;13268;13269;13270;13271;13272;13273;13274;13275;13276;13277;13278;13279;13280;13281 13278 20 AGDSEQTLQNHQQPNGGEPFLIGVSGGTASGK Acetyl (Protein N-term) 3222.5178 0.51776171 4277 Q9BZX2 UCK2 Uridine-cytidine kinase 2 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.12 2.42 1 1 15 2 2 1 1 2 1 1 2 1 1 1 1 1 80.084 79.644 3 1.5696E-84 92115 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 114.06 113.15 647020000 0 76104000 0 19361000 43580000 40290000 39252000 47558000 42786000 56502000 57994000 70363000 43223000 43316000 66689000 1952 4277 1786 16784;16785;16786;16787;16788;16789;16790;16791;16792;16793;16794;16795;16796;16797;16798;16799;16800 13282;13283;13284;13285;13286;13287;13288;13289;13290;13291;13292;13293;13294 13294 13 AGDTLQGIALK Unmodified 1085.6081 0.60807369 3223 Q8IV50 LYSMD2 LysM and putative peptidoglycan-binding domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 59.259 59.406 2 0.00095203 66814 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 76.1 40.22 35263000 0 0 0 0 4476900 0 5194100 3574300 2381200 3949500 6654800 5361000 0 3671100 0 1953 3223 1787 16801;16802;16803;16804;16805;16806;16807;16808;16809;16810 13295;13296;13297;13298;13299;13300;13301;13302;13303 13300 9 AGDTLSGTCLLIANK Unmodified 1532.7868 0.78684269 3190 Q86X55 CARM1 Histone-arginine methyltransferase CARM1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 77.424 73.297 2 0.00055073 91426 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.928 67.333 282220000 0 282220000 0 0 0 0 0 0 0 0 0 0 0 0 0 1954 3190 1788 16811;16812 13304 13304 1 AGDTSDQEGHSLEEK Unmodified 1601.6805 0.68052294 4032 Q99607 ELF4 ETS-related transcription factor Elf-4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.497 12.65 3 0.00085283 11404 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 54.09 31.858 77076000 0 0 0 4209900 4646900 5763600 4939400 5435400 4767900 8076200 4910300 9759500 9944400 6392200 8230300 1955 4032 1789 16813;16814;16815;16816;16817;16818;16819;16820;16821;16822;16823;16824 13305;13306;13307;13308;13309 13308 5 AGDTVIPLYIPQCGECK Unmodified 1919.9121 0.91211956 955 P11766 ADH5 Alcohol dehydrogenase class-3 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 86.599 82.583 2 5.78E-05 102551 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.88 98.565 147150000 0 147150000 0 0 0 0 0 0 0 0 0 0 0 0 0 1956 955 1790 16825;16826 13310 13310 1 AGDTVSYVICQDGSNLTASQR Unmodified 2241.0332 0.033173982 895 P09884 POLA1 DNA polymerase alpha catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.64 2.9 1 1 9 2 1 1 1 1 1 1 1 1 1 72.11 71.411 3 2.1761E-72 87944 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.67 99.396 128530000 0 60628000 0 0 5207400 5897900 4929600 6683400 0 8463500 13083000 0 4583400 5637400 13415000 1957 895 1791 16827;16828;16829;16830;16831;16832;16833;16834;16835;16836;16837 13311;13312;13313;13314;13315;13316;13317;13318;13319;13320 13313 10 AGDVEEDASQLIFPK Unmodified 1617.7886 0.78861683 290 O15514 POLR2D DNA-directed RNA polymerase II subunit RPB4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 2 81.366 81.447 2 0.0022962 93427 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 62.408 38.116 42593000 0 0 0 0 2760800 0 0 0 0 0 9375200 11137000 0 3817700 15502000 1958 290 1792 16838;16839;16840;16841;16842;16843 13321;13322;13323;13324;13325 13324 4 AGDVITVLEQHPDGR Unmodified 1605.8111 0.8110836 3588 Q8WXE0 CASKIN2 Caskin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 67.742 67.685 3 0.0035257 78426 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 33.307 26.248 83692000 0 0 0 7299700 4989800 10927000 13400000 7653100 9979300 11203000 0 0 18240000 0 0 1959 3588 1793 16844;16845;16846;16847;16848;16849;16850;16851 13326;13327;13328;13329;13330;13331;13332 13331 5 AGEAAELQDAEVESSAK Unmodified 1703.785 0.78498801 4782 Q9NZT2 OGFR Opioid growth factor receptor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.48 1 2 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 50.378 49.68 2 3.2198E-52 51564 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 160.69 152.82 193500000 28949000 30727000 0 8506500 7352200 9893300 7464700 8610500 6379400 8964200 14506000 19347000 10746000 9572900 22484000 1960 4782 1794 16852;16853;16854;16855;16856;16857;16858;16859;16860;16861;16862;16863;16864;16865;16866;16867 13333;13334;13335;13336;13337;13338;13339;13340;13341;13342;13343;13344;13345;13346;13347 13341 15 AGEAFRLEADVSGR Unmodified 1476.7321 0.732105 3603 Q8WZ42 TTN Titin yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By matching 10 0 5 1 1 1 1 1 18.927 18.912 3 0.017924 19445 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 21.351 9.911 10874000 0 0 0 3113000 1781400 1545300 0 0 1543000 2891000 0 0 0 0 0 1961 3603 1795 16868;16869;16870;16871;16872 13348;13349 13349 1 AGEAPTENPAPPTQQSSAE Unmodified 1880.8388 0.8388145 1044 P16989 YBX3 Y-box-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.79 2.98 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 38.808 39.639 2 1.462E-95 39428 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 181.77 175.9 1463400000 19121000 0 0 85779000 111260000 96725000 92225000 74537000 72618000 135410000 119450000 169690000 193190000 121780000 171610000 1962 1044 1796 16873;16874;16875;16876;16877;16878;16879;16880;16881;16882;16883;16884;16885;16886 13350;13351;13352;13353;13354;13355;13356;13357;13358;13359;13360;13361;13362;13363;13364;13365;13366;13367;13368;13369;13370 13353 21 AGEEERRQPQEEVVHEDQGK Unmodified 2349.0945 0.094528685 3573 Q8WWI1 LMO7 LIM domain only protein 7 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.082 18.27 4 1.5751E-37 16980 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.41 96.399 121920000 0 0 0 6499400 3928000 8842100 4489600 7505300 6300000 17080000 9021400 28391000 9562200 5308900 14995000 1963 3573 1797 16887;16888;16889;16890;16891;16892;16893;16894;16895;16896;16897;16898 13371;13372;13373;13374;13375;13376;13377;13378;13379;13380 13373 10 AGEEHYNCISALHK Unmodified 1627.7413 0.74128948 3983 Q96S55 WRNIP1 ATPase WRNIP1 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 33.601 33.856 3 0.0092982 36905 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 27.536 21.149 41063000 0 0 0 0 1539500 0 3021400 1972400 3405700 4003300 5228400 11152000 0 4077600 6662900 1964 3983 1798 16899;16900;16901;16902;16903;16904;16905;16906;16907 13381;13382 13381 2 AGEEINEDYPVEIHEYLSAFENSIGAVDEMLK Acetyl (Protein N-term) 3652.6767 0.6766897 2355 Q13901 C1D Nuclear nucleic acid-binding protein C1D yes yes 1 0 0 By MS/MS 2 0 1 1 104.78 96.65 3 2.0195E-12 124124 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.078 55.26 3107800 3107800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1965 2355 1799 16908 13383 13383 1 AGEGLGTSSGDAISGTDHNSLDSSLTR Unmodified 2604.1899 0.18994521 4999 Q9ULL5 PRR12 Proline-rich protein 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.899 61.003 3 2.0343E-31 68904 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.992 76.716 123010000 0 0 0 6580800 7778700 9055300 8698000 10350000 7266500 12850000 10291000 16710000 10046000 9394200 13993000 1966 4999 1800 16909;16910;16911;16912;16913;16914;16915;16916;16917;16918;16919;16920 13384;13385;13386;13387;13388;13389;13390;13391;13392;13393;13394;13395 13387 12 AGEGLGTSSGDAISGTDHNSLDSSLTREK Unmodified 2861.3275 0.32750133 4999 Q9ULL5 PRR12 Proline-rich protein 12 yes yes 0 0 1 By MS/MS 2 0 1 1 59.852 56.068 4 0.02547 69888 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 20.261 17.198 3915500 0 0 3915500 0 0 0 0 0 0 0 0 0 0 0 0 1967 4999 1801 16921 13396 13396 1 AGEGTYALDSESCMEK Oxidation (M) 1762.7026 0.70258029 167 O00541 PES1 Pescadillo homolog yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 36.048 36.229 2 1.1419E-23 39530 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 120.87 116.56 302390000 0 0 0 24868000 24833000 23962000 23621000 17890000 20489000 32071000 21404000 33081000 36703000 22229000 21236000 1968 167 1802 16922;16923;16924;16925;16926;16927;16928;16929;16930;16931;16932;16933;16934 13397;13398;13399;13400;13401;13402;13403;13404;13405;13406;13407;13408;13409 13407 231 13 AGEGTYALDSESCMEK Unmodified 1746.7077 0.70766567 167 O00541 PES1 Pescadillo homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 47.444 47.155 2 7.0148E-28 54000 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 163.99 157.67 588820000 0 33357000 0 29343000 51394000 49464000 28488000 31443000 29037000 92145000 45489000 46743000 51739000 39278000 60903000 1969 167 1802 16935;16936;16937;16938;16939;16940;16941;16942;16943;16944;16945;16946;16947 13410;13411;13412;13413;13414;13415;13416;13417;13418;13419;13420;13421;13422;13423 13422 14 AGEIIEIINK Unmodified 1098.6285 0.62847478 5230 Q9Y5B8 NME7 Nucleoside diphosphate kinase 7 yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 74.242 71.29 2 0.0014533 87255 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 110.87 72.065 18319000 0 0 18319000 0 0 0 0 0 0 0 0 0 0 0 0 1970 5230 1803 16948;16949 13424;13425 13425 2 AGEIITVLDDSDPNWWK Unmodified 1957.9422 0.94215736 3659 Q92783 STAM Signal transducing adapter molecule 1 yes yes 0 0 0 By MS/MS 2 0 1 1 97.275 89.144 2 0.0081084 115124 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.034 20.536 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1971 3659 1804 16950 13426 13426 1 AGELARAQEALSHTEQSK Unmodified 1924.9603 0.96026704 461 O75146 HIP1R Huntingtin-interacting protein 1-related protein yes yes 0 0 1 By MS/MS 2 0 1 1 60.468 52.227 3 0.00018795 70910 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.202 61.133 12971000 12971000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1972 461 1805 16951 13427;13428 13428 2 AGELTEDEVER Unmodified 1246.5677 0.56772501 1885 P62269 RPS18 40S ribosomal protein S18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 31.698 31.756 2 0.00045534 34633 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 97.456 78.353 78376000 0 0 0 0 18417000 9396700 6305900 7213600 6065200 14773000 0 0 16204000 0 0 1973 1885 1806 16952;16953;16954;16955;16956;16957;16958;16959 13429;13430;13431;13432;13433;13434 13433 6 AGELTPEEEAQYK Acetyl (Protein N-term) 1505.6886 0.68856843 4781 Q9NZT1 CALML5 Calmodulin-like protein 5 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.47 2 9 1 1 1 1 1 1 1 1 1 1 1 64.225 64.963 2 7.3065E-17 68073 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 150.61 140.3 1098900000 1151500 0 0 413140000 0 78734000 0 0 0 80904000 130690000 143720000 86558000 65595000 98419000 1974 4781 1807 16960;16961;16962;16963;16964;16965;16966;16967;16968;16969;16970 13435;13436;13437;13438;13439;13440;13441;13442;13443;13444;13445;13446;13447 13446 13 AGELTPEEEAQYKK Acetyl (Protein N-term) 1633.7835 0.78353145 4781 Q9NZT1 CALML5 Calmodulin-like protein 5 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.663 48.822 2 1.044E-32 54049 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 162.36 152.67 3251600000 0 0 0 1048800000 321100000 60905000 122430000 416930000 43244000 121030000 207860000 469940000 168460000 94729000 176190000 1975 4781 1808 16971;16972;16973;16974;16975;16976;16977;16978;16979;16980;16981;16982 13448;13449;13450;13451;13452;13453;13454;13455;13456;13457;13458;13459 13451 12 AGENRWGTDEDK Unmodified 1376.5957 0.5956711 968 P12429 ANXA3 Annexin A3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 18.083 14.615 3 0.039597 18444 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 46.063 38.607 33475000 10322000 8525200 14628000 0 0 0 0 0 0 0 0 0 0 0 0 1976 968 1809 16983;16984;16985 13460 13460 0 AGEPDGESLDEQPSSSSSK Unmodified 1905.8076 0.80757395 4383 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.28 28.475 2 0 30209 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 320.57 315.09 661480000 0 0 0 34126000 39509000 35945000 46858000 39349000 42236000 71380000 119600000 71976000 60588000 43538000 56380000 1977 4383 1810 16986;16987;16988;16989;16990;16991;16992;16993;16994;16995;16996;16997 13461;13462;13463;13464;13465;13466;13467;13468;13469;13470;13471;13472;13473 13467 13 AGEPDGESLDEQPSSSSSKR Unmodified 2061.9087 0.90868497 4383 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 24.436 24.35 3 0.0086171 25729 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 24.893 20.925 9107200 0 0 0 2028900 2070200 0 3093000 1915100 0 0 0 0 0 0 0 1978 4383 1811 16998;16999;17000;17001 13474;13475;13476 13474 3 AGEPNSPDAEEANSPDVTAGCDPAGVHPPR Unmodified 3013.3108 0.31080541 2168 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 2 1 2 1 1 1 1 1 1 1 1 1 55.043 55.173 3 2.9802E-33 62610 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 73.655 71.489 129560000 0 0 0 10524000 7271900 10202000 15129000 6640200 7919500 9911200 12181000 15059000 9350000 11308000 14060000 1979 2168 1812 17002;17003;17004;17005;17006;17007;17008;17009;17010;17011;17012;17013;17014;17015 13477;13478;13479;13480;13481;13482;13483;13484;13485;13486;13487;13488 13482 12 AGEQLAPFLPQLVPR Unmodified 1634.9144 0.91442646 2828 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 92.742 92.85 2 6.9798E-05 108094 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 74.944 59.315 29851000 0 0 0 0 973170 1846200 991030 2166700 1165900 5312900 2147100 4173900 0 2317400 8756500 1980 2828 1813 17016;17017;17018;17019;17020;17021;17022;17023;17024;17025 13489;13490;13491;13492;13493;13494;13495;13496 13496 8 AGEQQETASRELVK Unmodified 1544.7794 0.77944912 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 1 By MS/MS 3 0 1 1 28.123 23.838 3 0.004206 29749 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 57.175 45.904 12715000 0 12715000 0 0 0 0 0 0 0 0 0 0 0 0 0 1981 2459 1814 17026 13497 13497 1 AGETMEPALR Oxidation (M) 1089.5125 0.51245874 4710 Q9NWZ5 UCKL1 Uridine-cytidine kinase-like 1 yes yes 0 1 0 By MS/MS 10 0 1 1 24.267 24.435 2 0.017277 25789 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 44.349 28.055 2575400 0 0 0 0 0 0 0 2575400 0 0 0 0 0 0 0 1982 4710 1815 17027 13498 13498 6103 1 AGETMYLYEK Unmodified 1203.5482 0.54817555 4455 Q9H8V3 ECT2 Protein ECT2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 50.351 50.147 2 0.010122 57587 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 56.563 39.323 7015000 0 0 0 2355800 0 0 0 0 0 0 0 0 0 4659200 0 1983 4455 1816 17028;17029 13499;13500 13500 2 AGEVERDLDK Unmodified 1130.5568 0.5567664 2501 Q15149 PLEC Plectin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 2 1 15.494 15.672 2 0.042269 14683 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 104.22 60.414 104950000 0 0 0 4734400 5096600 4921000 6780000 0 3368100 6839100 11407000 13975000 11784000 19925000 16119000 1984 2501 1817 17030;17031;17032;17033;17034;17035;17036;17037;17038;17039;17040;17041 13501;13502 13501 2 AGEVFIHK Unmodified 899.4865 0.48650199 2508 Q15233 NONO Non-POU domain-containing octamer-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.18 3.84 1 4 1 11 2 2 2 1 1 1 1 1 1 1 1 1 1 1 27.229 26.033 2 0.0046473 32603 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 128.57 77.6 4154700000 1574400000 386370000 1356600000 41569000 29372000 65222000 58922000 45677000 26257000 103040000 0 190630000 78599000 52751000 145270000 1985 2508 1818 17042;17043;17044;17045;17046;17047;17048;17049;17050;17051;17052;17053;17054;17055;17056;17057;17058 13503;13504;13505;13506;13507;13508;13509;13510;13511;13512;13513;13514;13515;13516;13517;13518;13519;13520;13521;13522;13523 13516 21 AGEVINQPMMMAAR Oxidation (M) 1533.7102 0.71018905 1073 P18206 VCL Vinculin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 2 2 2 2 54.856 55.237 2 0.00023233 61646 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 76.465 54.379 79188000 0 0 0 0 0 4814100 5371400 0 0 6642900 14036000 13096000 0 6504900 28722000 1986 1073 1819 17059;17060;17061;17062;17063;17064;17065;17066;17067;17068;17069;17070 13524;13525;13526;13527;13528;13529;13530;13531;13532;13533 13525 1525;1526;1527 10 AGEVINQPMMMAAR Unmodified 1517.7153 0.71527442 1073 P18206 VCL Vinculin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 68.748 67.181 2 1.9205E-29 85268 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 174.41 122.97 107070000 0 71045000 0 0 0 0 0 0 0 0 8540400 0 0 0 27486000 1987 1073 1819 17071;17072;17073;17074 13534;13535;13536;13537 13534 4 AGEVINQPMMMAAR 2 Oxidation (M) 1549.7051 0.70510367 1073 P18206 VCL Vinculin yes yes 0 2 0 By MS/MS By MS/MS 10 0 2 1 1 41.673 42.181 2 0.0025418 46078 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.338 28.985 12291000 0 0 0 0 0 0 0 0 0 0 0 0 0 4002300 8288200 1988 1073 1819 17075;17076 13538 13538 1525;1526;1527 1 AGEVQEPELR Unmodified 1126.5619 0.56185177 1185 P25311 AZGP1 Zinc-alpha-2-glycoprotein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.665 35.847 2 1.0397E-09 39695 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 147.51 99.225 1088100000 0 0 0 286140000 66079000 70601000 62515000 75434000 39029000 73498000 108540000 109680000 61494000 64972000 70114000 1989 1185 1820 17077;17078;17079;17080;17081;17082;17083;17084;17085;17086;17087;17088 13539;13540;13541;13542;13543;13544;13545;13546;13547;13548;13549;13550;13551 13546 9 AGFAGDDAPR Unmodified 975.44101 0.44100836 1951;1815;1958 P60709;Q6S8J3;A5A3E0;P0CG38;P0CG39;P63261;P68032;P63267;P68133;P62736 ACTB;POTEE;POTEF;POTEI;POTEJ;ACTG1;ACTC1;ACTG2;ACTA1;ACTA2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, aortic smooth muscle no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 6 22 2 2 2 3 2 2 2 2 2 2 2 1 1 2 1 24.458 24.115 2 0.0009285 25093 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 112.84 96.066 68278000000 17055000 144350000 4510300 4841800000 5075300000 5573000000 5717600000 4922800000 4052900000 4912500000 5314800000 9131300000 6133600000 4658000000 7778700000 1990 1815;1951;1958 1821 17089;17090;17091;17092;17093;17094;17095;17096;17097;17098;17099;17100;17101;17102;17103;17104;17105;17106;17107;17108;17109;17110;17111;17112;17113;17114;17115;17116 13552;13553;13554;13555;13556;13557;13558;13559;13560;13561;13562;13563;13564;13565;13566;13567;13568;13569;13570;13571;13572;13573;13574;13575;13576;13577;13578;13579;13580;13581;13582;13583;13584;13585;13586;13587;13588;13589;13590;13591 13572 40 AGFAGDDAPRAVFPSIVGRPR Unmodified 2155.1287 0.12866977 1951;1815;1958 P60709;Q6S8J3;A5A3E0;P0CG38;P63261;P68032;P63267;P68133;P62736 ACTB;POTEE;POTEF;POTEI;ACTG1;ACTC1;ACTG2;ACTA1;ACTA2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, aortic smooth muscle no no 0 0 2 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 76.169 76.32 4 0.0028364 87736 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 35.036 26.536 47017000 0 0 0 0 0 10913000 0 0 8077600 0 0 0 0 0 28027000 1991 1815;1951;1958 1822 17117;17118;17119 13592;13593 13593 2 AGFAGDQIPK Unmodified 1002.5134 0.51344502 1837;1444 P61163;P42025 ACTR1A;ACTR1B Alpha-centractin;Beta-centractin no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.28 3.23 3 1 14 1 2 1 1 2 1 1 1 2 1 1 1 1 1 1 44.194 43.053 2 0.0024913 55487 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.2 82.9 3254400000 59846000 2550000000 23392000 29888000 26456000 54747000 34404000 35091000 34436000 55672000 56986000 75531000 57306000 45830000 114890000 1992 1837;1444 1823 17120;17121;17122;17123;17124;17125;17126;17127;17128;17129;17130;17131;17132;17133;17134;17135;17136;17137 13594;13595;13596;13597;13598;13599;13600;13601;13602;13603;13604;13605;13606;13607;13608 13596 12 AGFDSDYDQALADIR Unmodified 1655.7427 0.74272927 1694 P52701 MSH6 DNA mismatch repair protein Msh6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.964 80.069 2 1.4613E-05 92650 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 99.5 88.742 50794000 0 0 0 0 1332700 5784100 1826500 3313300 3342100 5282700 5258600 5843100 0 4292800 14518000 1993 1694 1824 17138;17139;17140;17141;17142;17143;17144;17145;17146;17147;17148 13609;13610;13611;13612;13613;13614;13615;13616;13617 13614 9 AGFDSDYDQALADIRENEQSLLEYLEK Unmodified 3131.4571 0.45711852 1694 P52701 MSH6 DNA mismatch repair protein Msh6 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 100.91 94.489 3 4.7444E-246 119307 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 228.63 221.12 131340000 101120000 30219000 0 0 0 0 0 0 0 0 0 0 0 0 0 1994 1694 1825 17149;17150;17151 13618;13619;13620 13620 3 AGFFLPPDEYVVTDPEQEK Unmodified 2180.0314 0.031366293 2427 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 91.7 87.638 2 0.00029768 104687 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 64.65 59.335 50404000 0 50404000 0 0 0 0 0 0 0 0 0 0 0 0 0 1995 2427 1826 17152;17153 13621 13621 1 AGFGAMEK Acetyl (Protein N-term) 851.38474 0.38473903 228 O14929 HAT1 Histone acetyltransferase type B catalytic subunit yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.83 1 8 1 1 1 1 1 1 1 1 1 58.386 59.103 2 0.0045908 90108 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 86.794 74.41 123420000 46444000 0 0 3909600 0 8443200 5761900 5471000 0 9933700 12074000 0 6911800 0 24474000 1996 228 1827 17154;17155;17156;17157;17158;17159;17160;17161;17162 13622;13623;13624;13625;13626;13627;13628 13625 7 AGFGAMEK Acetyl (Protein N-term);Oxidation (M) 867.37965 0.37965365 228 O14929 HAT1 Histone acetyltransferase type B catalytic subunit yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9 2.83 1 8 1 1 1 1 1 1 1 1 1 40.296 40.962 2 0.0072908 35260 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 44.961 26.155 90951000 46062000 0 0 3551600 2916700 7630100 6491100 0 3501000 6351900 7661900 6784300 0 0 0 1997 228 1827 17163;17164;17165;17166;17167;17168;17169;17170;17171 13629;13630;13631 13631 297 3 AGFLDLK Unmodified 762.42759 0.42759012 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.337 65.425 2 0.028147 75213 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 76.847 34.372 392550000 0 0 0 16993000 16672000 46438000 25825000 21971000 20086000 45420000 40886000 42179000 30631000 30018000 55430000 1998 5187 1828 17172;17173;17174;17175;17176;17177;17178;17179;17180;17181;17182;17183 13632 13632 1 AGFLIGDGAGVGK Unmodified 1160.619 0.61897272 17 A3KN83 SBNO1 Protein strawberry notch homolog 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.724 67.806 2 0.00043284 77841 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 79.974 48.039 144830000 0 0 0 8765300 6199800 12082000 13264000 11921000 6667600 13682000 12627000 11729000 19479000 9738000 18676000 1999 17 1829 17184;17185;17186;17187;17188;17189;17190;17191;17192;17193;17194;17195 13633;13634;13635;13636;13637;13638;13639;13640;13641;13642;13643;13644;13645;13646;13647;13648 13635 16 AGFNYESPSK Unmodified 1098.4982 0.49818889 4900 Q9UHF7 TRPS1 Zinc finger transcription factor Trps1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 33.958 34.197 2 0.018954 36838 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 48.091 39.318 105670000 0 0 0 0 10173000 9265800 6730500 7915400 5782600 7862400 10736000 14004000 14454000 8429000 10317000 2000 4900 1830 17196;17197;17198;17199;17200;17201;17202;17203;17204;17205;17206 13649 13649 1 AGFRPVEAGGQHGGR Unmodified 1494.744 0.74400709 266 O15234 CASC3 Protein CASC3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.398 19.595 3 0.00024656 18962 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 65.374 55.575 75102000 0 0 0 4387000 4529400 5893600 6355900 5305200 6979500 6571800 5209500 8447800 6198400 5064100 10160000 2001 266 1831 17207;17208;17209;17210;17211;17212;17213;17214;17215;17216;17217;17218 13650;13651;13652;13653;13654;13655;13656 13653 6 AGFSGGMVVDYPNSAK Oxidation (M) 1614.7348 0.73480712 358 O43709 WBSCR22 Probable 18S rRNA (guanine-N(7))-methyltransferase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.71 3.81 2 1 4 3 1 1 1 1 56.989 54.503 2 3.6187E-05 69581 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.276 82.815 144940000 0 78454000 0 11834000 14770000 19577000 0 0 0 0 0 0 20303000 0 0 2002 358 1832 17219;17220;17221;17222;17223;17224;17225 13657;13658;13659;13660;13661;13662;13663 13659 457 7 AGFSGGMVVDYPNSAK Unmodified 1598.7399 0.73989249 358 O43709 WBSCR22 Probable 18S rRNA (guanine-N(7))-methyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.56 1 1 13 2 2 1 1 1 1 1 1 1 1 1 1 1 68.248 67.594 2 1.3614E-23 85085 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 158.06 144.71 371160000 0 250010000 0 4128700 8565400 11077000 7178800 7649300 7432300 12370000 12860000 14622000 9739800 7916600 17605000 2003 358 1832 17226;17227;17228;17229;17230;17231;17232;17233;17234;17235;17236;17237;17238;17239;17240 13664;13665;13666;13667;13668;13669;13670;13671;13672;13673;13674;13675;13676;13677 13668 13 AGFVPVYLR Unmodified 1020.5757 0.57565135 4319 Q9H0A0 NAT10 N-acetyltransferase 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching 10 0 5 1 1 1 1 1 76.917 77.081 2 0.0088535 88835 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 68.422 30.183 15660000 0 0 0 0 0 0 4136300 4000900 3799400 1869100 0 1854300 0 0 0 2004 4319 1833 17241;17242;17243;17244;17245 13678;13679;13680 13678 3 AGGAAVVITEPEHTK Unmodified 1478.7729 0.77290718 4806 Q9P258 RCC2 Protein RCC2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.67 3.55 7 3 23 3 5 2 2 2 2 2 2 2 2 2 1 2 2 2 39.639 38.304 2;3 8.1737E-31 42340 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 115.12 99.574 2716300000 228630000 1475900000 267700000 53825000 41540000 57328000 51390000 45732000 47186000 65557000 96699000 18006000 48585000 62509000 155700000 2005 4806 1834 17246;17247;17248;17249;17250;17251;17252;17253;17254;17255;17256;17257;17258;17259;17260;17261;17262;17263;17264;17265;17266;17267;17268;17269;17270;17271;17272;17273;17274;17275;17276;17277;17278 13681;13682;13683;13684;13685;13686;13687;13688;13689;13690;13691;13692;13693;13694;13695;13696;13697;13698;13699;13700;13701;13702;13703;13704;13705;13706;13707;13708;13709;13710;13711 13703 23 AGGADAVQTVTGGLR Unmodified 1371.7106 0.71064128 4357 Q9H223 EHD4 EH domain-containing protein 4 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 57.689 57.781 2 1.9212E-14 65377 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 101.93 83.592 76482000 0 0 0 13599000 9066700 0 0 8823700 0 0 11718000 18256000 0 0 15018000 2006 4357 1835 17279;17280;17281;17282;17283;17284;17285 13712;13713;13714;13715;13716 13715 5 AGGANYDAQTE Unmodified 1095.4469 0.4468816 2363 Q14019 COTL1 Coactosin-like protein yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.71 3.15 1 6 1 1 1 1 1 1 1 15.993 16.318 2 0.00063519 15520 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 78.77 67.359 36843000 0 0 0 0 0 0 1948200 0 0 1766200 7471200 4926300 0 5898800 14832000 2007 2363 1836 17286;17287;17288;17289;17290;17291;17292 13717;13718;13719;13720;13721 13718 5 AGGASPAASSTAQPPTQHR Unmodified 1790.866 0.86597272 3213 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 18.006 18.194 2;3 2.6064E-42 17357 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 123.63 118.63 546480000 0 0 0 39882000 42999000 47010000 46729000 39590000 36716000 54441000 49063000 61744000 37864000 33662000 56778000 2008 3213 1837 17293;17294;17295;17296;17297;17298;17299;17300;17301;17302;17303;17304;17305;17306;17307;17308;17309;17310;17311;17312;17313;17314;17315;17316 13722;13723;13724;13725;13726;13727;13728;13729;13730;13731;13732;13733;13734;13735;13736;13737 13727 15 AGGDATDSSQTALDNK Unmodified 1549.6856 0.68560832 456 O75122 CLASP2 CLIP-associating protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.066 19.262 2 2.1901E-31 18334 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 137.16 127.27 141880000 0 0 0 9895500 9694400 9267200 8692700 8300700 7973900 15431000 15455000 18549000 13626000 8470300 16524000 2009 456 1838 17317;17318;17319;17320;17321;17322;17323;17324;17325;17326;17327;17328 13738;13739;13740;13741;13742;13743;13744;13745;13746;13747;13748;13749;13750 13746 11 AGGDSGNVDDDCERVK Unmodified 1692.7009 0.70094081 3903 Q96K76 USP47 Ubiquitin carboxyl-terminal hydrolase 47 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 14.308 13.587 3 4.9595E-07 15891 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.23 88.966 183520000 11538000 94552000 1479100 3682100 4115100 6191000 3080100 3583800 2898100 7842700 8489300 6034600 6907000 6755600 16374000 2010 3903 1839 17329;17330;17331;17332;17333;17334;17335;17336;17337;17338;17339;17340;17341;17342;17343;17344 13751;13752;13753;13754;13755;13756;13757;13758;13759;13760;13761;13762;13763;13764 13754 14 AGGDTHLGK Unmodified 854.42463 0.42463001 2843 Q66K14 TBC1D9B TBC1 domain family member 9B yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 5.8966 2.5958 2 0.0094872 4602 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.181 35.394 155950000 0 155950000 0 0 0 0 0 0 0 0 0 0 0 0 0 2011 2843 1840 17345;17346 13765;13766;13767 13765 3 AGGEAGVTLGQPHLSR Acetyl (Protein N-term) 1590.8114 0.81141795 1427 P41091;Q2VIR3 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein yes no 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.21 2.31 1 1 17 2 1 2 2 1 2 2 2 1 1 1 1 1 61.624 61.124 2;3 1.0306E-71 68934 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 181.66 171.14 1099300000 0 35105000 0 39643000 59106000 94988000 54535000 94277000 59531000 107610000 89582000 131100000 76795000 87116000 169950000 2012 1427 1841 17347;17348;17349;17350;17351;17352;17353;17354;17355;17356;17357;17358;17359;17360;17361;17362;17363;17364;17365 13768;13769;13770;13771;13772;13773;13774;13775;13776;13777;13778;13779;13780;13781;13782;13783 13779 15 AGGEAGVTLGQPHLSR Unmodified 1548.8009 0.80085327 1427 P41091;Q2VIR3 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein yes no 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 46.744 46.994 2;3 0.0024309 53256 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 47.915 13.383 90182000 0 0 0 0 0 0 0 0 0 79643000 0 0 10539000 0 0 2013 1427 1841 17366;17367 13784;13785 13785 1 AGGEAGVTLGQPHLSRQDLTTLDVTK Acetyl (Protein N-term) 2705.3984 0.39842185 1427 P41091;Q2VIR3 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein yes no 1 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 82.921 78.268 3 2.2026E-159 98251 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 197.37 193.8 1132500000 55738000 993470000 83302000 0 0 0 0 0 0 0 0 0 0 0 0 2014 1427 1842 17368;17369;17370;17371 13786;13787;13788;13789;13790 13786 5 AGGEAGVTLGQPHLSRQDLTTLDVTK Unmodified 2663.3879 0.38785716 1427 P41091;Q2VIR3 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein yes no 0 0 1 By MS/MS 2 0 2 2 80.26 72.13 3;4 9.0104E-19 94596 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.423 77.396 164580000 164580000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2015 1427 1842 17372;17373 13791;13792 13791 2 AGGEDRGDGEPVSVVTVR Unmodified 1798.881 0.88095408 5260 Q9Y613 FHOD1 FH1/FH2 domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 45.791 45.963 3 0.0002392 50641 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 40.432 29.797 164210000 0 0 0 12611000 12006000 19712000 15586000 0 0 0 18106000 27543000 20183000 11156000 27307000 2016 5260 1843 17374;17375;17376;17377;17378;17379;17380;17381;17382 13793;13794;13795;13796;13797;13798;13799;13800 13796 8 AGGEELDEGVAK Unmodified 1173.5513 0.55134667 2661 Q32MZ4 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.263 27.461 2 1.4951E-06 28854 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 121.83 105.63 275120000 0 0 0 13953000 13650000 14883000 14587000 16779000 14894000 20858000 30733000 51913000 16897000 22221000 43756000 2017 2661 1844 17383;17384;17385;17386;17387;17388;17389;17390;17391;17392;17393;17394 13801;13802;13803;13804;13805;13806;13807;13808;13809;13810;13811;13812;13813 13811 13 AGGFEIQEESK Unmodified 1193.5564 0.55643205 3266 Q8IXQ6 PARP9 Poly [ADP-ribose] polymerase 9 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 42.375 37.458 2 5.784E-10 48408 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 148.94 117.07 51668000 0 51668000 0 0 0 0 0 0 0 0 0 0 0 0 0 2018 3266 1845 17395;17396 13814 13814 1 AGGFLMK Oxidation (M) 738.37345 0.37344606 733 P00558 PGK1 Phosphoglycerate kinase 1 yes yes 0 1 0 By matching By MS/MS By MS/MS 2.17 0.373 5 1 2 3 1 30.952 26.261 1 0.017063 35025 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.618 32.288 595070000 334540000 213230000 47299000 0 0 0 0 0 0 0 0 0 0 0 0 2019 733 1846 17397;17398;17399;17400;17401;17402 13815;13816;13817 13815 884 0 AGGGAAEQEELHYIPIR Unmodified 1809.901 0.90096124 3496 Q8TD19 NEK9 Serine/threonine-protein kinase Nek9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 67.668 67.892 3 0.00018875 77102 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 63.29 34.658 101580000 0 0 0 0 0 11764000 7464500 0 0 13176000 13194000 20996000 9971200 8880600 16132000 2020 3496 1847 17403;17404;17405;17406;17407;17408;17409;17410 13818;13819;13820;13821;13822;13823 13821 5 AGGGAGDPGLGAAAAPAPETR Unmodified 1762.8598 0.85982471 2337 Q13637 RAB32 Ras-related protein Rab-32 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 45.67 45.945 2 0.0021873 51612 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 53.001 39.338 28919000 0 0 0 0 0 0 4453000 4543600 0 5466800 0 0 0 4454000 10002000 2021 2337 1848 17411;17412;17413;17414;17415 13824;13825 13825 2 AGGGAGDPGLGAAAAPAPETR Acetyl (Protein N-term) 1804.8704 0.8703894 2337 Q13637 RAB32 Ras-related protein Rab-32 yes yes 1 0 0 By matching By MS/MS 10 0 2 1 1 58.863 59.007 2 0.00018433 67395 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 59.898 50.71 5140300 0 0 0 0 0 0 2273000 2867300 0 0 0 0 0 0 0 2022 2337 1848 17416;17417 13826 13826 1 AGGGAGDPGLGAAAAPAPETREHLFK Acetyl (Protein N-term) 2459.2193 0.21933527 2337 Q13637 RAB32 Ras-related protein Rab-32 yes yes 1 0 1 By MS/MS 2 0 1 1 73.428 70.476 3 4.8584E-05 86081 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 43.523 35.235 9130200 0 0 9130200 0 0 0 0 0 0 0 0 0 0 0 0 2023 2337 1849 17418 13827 13827 1 AGGGATPVSSPSR Unmodified 1142.568 0.56799978 5191 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 15.629 15.682 2 0.0025095 14246 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 63.624 44.53 30457000 0 0 0 4012900 2635300 3164600 4518900 0 2349900 3214100 0 0 5519600 5041700 0 2024 5191 1850 17419;17420;17421;17422;17423;17424;17425;17426 13828;13829 13829 2 AGGGPTLQCPPPSSPEK Unmodified 1678.7985 0.79847001 3932 Q96N66 MBOAT7 Lysophospholipid acyltransferase 7 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 39.096 39.617 2 0.00011668 43604 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 72.958 55.932 7342800 0 0 0 0 0 0 0 0 0 0 0 4952100 0 2390600 0 2025 3932 1851 17427;17428 13830 13830 1 AGGIETIANEFSDR Unmodified 1478.7001 0.70013617 3633 Q92598 HSPH1 Heat shock protein 105 kDa yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 77.607 77.69 2 0.0013311 88862 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 59.265 49.907 206470000 0 0 0 5114100 0 6218100 5747000 8907600 0 10150000 25537000 25037000 0 26441000 93320000 2026 3633 1852 17429;17430;17431;17432;17433;17434;17435;17436;17437 13831;13832;13833;13834 13833 4 AGGIETIANEYSDR Unmodified 1494.6951 0.69505079 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 62.356 62.6 2 0.00036066 70713 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 93.442 74.464 139110000 0 0 0 0 0 4210900 3969600 6844300 0 7242100 22893000 17917000 4306400 16384000 55339000 2027 1337 1853 17438;17439;17440;17441;17442;17443;17444;17445;17446 13835;13836;13837;13838;13839;13840 13839 4 AGGKPSQSPSQEAAGEAVLGAK Unmodified 2039.0283 0.028346601 731 P00519 ABL1 Tyrosine-protein kinase ABL1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.567 41.745 3 1.6702E-13 45522 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.112 69.131 102440000 0 0 0 5703900 7010200 3207500 10328000 11977000 4090600 9301400 19433000 9391400 7591300 6128400 8281400 2028 731 1854 17447;17448;17449;17450;17451;17452;17453;17454;17455;17456;17457;17458 13841;13842;13843;13844;13845;13846;13847;13848;13849;13850;13851;13852 13844 12 AGGLIYQLDSYAPRAEAEK Unmodified 2051.0324 0.032369346 5093 Q9Y296 TRAPPC4 Trafficking protein particle complex subunit 4 yes yes 0 0 1 By MS/MS 2 0 1 1 85.204 77.073 3 0.011054 100609 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 33.918 25.061 13381000 13381000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2029 5093 1855 17459 13853 13853 1 AGGLLGAGPDPR Unmodified 1079.5724 0.57235688 901 P0CG12 CHTF8 Chromosome transmission fidelity protein 8 homolog isoform 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 47.551 47.783 2 0.0055962 53720 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 78.113 62.732 269590000 0 0 0 0 16377000 19730000 18503000 22228000 19988000 27022000 26150000 39702000 26793000 21407000 31696000 2030 901 1856 17460;17461;17462;17463;17464;17465;17466;17467;17468;17469;17470 13854;13855;13856;13857;13858;13859 13854 1 AGGPPQVAGAQAACSEDR Unmodified 1740.7849 0.78494521 4385 Q9H3R5 CENPH Centromere protein H yes yes 0 0 0 By matching By MS/MS By matching By matching By matching 10 0 5 1 1 1 1 1 34.963 34.893 2 0.0027689 38604 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 53.967 39.547 7897700 0 0 0 1081700 1285400 0 1857000 1419500 0 0 0 0 0 2254100 0 2031 4385 1857 17471;17472;17473;17474;17475 13860 13860 1 AGGPQLDR Unmodified 812.41407 0.41406533 2958 Q6PJG2 ELMSAN1 ELM2 and SANT domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 14.496 14.547 2 0.033014 14029 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 53.968 18.474 16312000 0 0 0 0 0 4706600 4786000 0 0 0 0 0 6819300 0 0 2032 2958 1858 17476;17477;17478 13861;13862;13863 13863 3 AGGPTTPLSPTR Unmodified 1153.6091 0.60913632 1111 P20700 LMNB1 Lamin-B1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.66 35.843 2 0.0095731 39547 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 47.559 26.689 109620000 0 0 0 5933900 6203500 7281800 6926800 5215400 6641400 8783500 12128000 14083000 10326000 10794000 15298000 2033 1111 1859 17479;17480;17481;17482;17483;17484;17485;17486;17487;17488;17489;17490 13864;13865;13866;13867 13867 3 AGGPVATSVPIGWQR Unmodified 1494.7943 0.79431133 3800 Q96DN6 MBD6 Methyl-CpG-binding domain protein 6 yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By matching 10 0 6 1 1 1 1 1 1 73.756 73.809 2 0.0081773 85458 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 50.284 35.018 22236000 0 0 0 0 2937000 3051000 0 4372100 0 0 0 4493100 4008100 3374900 0 2034 3800 1860 17491;17492;17493;17494;17495;17496 13868 13868 1 AGGQINHDLHER Unmodified 1345.6487 0.64870972 4641 Q9NU22 MDN1 Midasin yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 13.122 13.246 3 0.0055578 12690 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 48.568 37.309 47067000 0 0 0 1935100 2689700 2629400 2716800 3622300 1823200 6852200 0 9443500 5071900 4423400 5859400 2035 4641 1861 17497;17498;17499;17500;17501;17502;17503;17504;17505;17506;17507 13869;13870 13870 2 AGGRDCGTSVPQGLLK Unmodified 1614.8148 0.81478877 4468 Q9H9A6 LRRC40 Leucine-rich repeat-containing protein 40 yes yes 0 0 1 By MS/MS 2 0 1 1 57.831 49.625 3 0.0088199 68329 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.947 29.268 31190000 31190000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2036 4468 1862 17508 13871;13872 13872 2 AGGSAALSPSK Unmodified 944.49271 0.49270958 3612 Q92522 H1FX Histone H1x yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 13.074 12.904 2 0.0072376 11440 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 54.539 29.541 29535000 0 8971000 0 0 2082000 1927100 1920200 1576500 1835600 0 2587300 3134800 0 2286900 3213900 2037 3612 1863 17509;17510;17511;17512;17513;17514;17515;17516;17517;17518 13873;13874;13875;13876 13875 4 AGGSASAMLQPLLDNQVGFK Oxidation (M) 2019.0095 0.0095254139 1107 P20618 PSMB1 Proteasome subunit beta type-1 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.84 2.68 1 2 16 3 1 1 2 1 2 1 2 2 1 1 2 82.268 81.749 2;3 6.9436E-74 94476 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 150.12 119.23 536010000 0 200410000 0 5028400 4648500 17989000 5415300 21602000 9831200 0 72278000 77482000 5253800 15186000 100890000 2038 1107 1864 17519;17520;17521;17522;17523;17524;17525;17526;17527;17528;17529;17530;17531;17532;17533;17534;17535;17536;17537 13877;13878;13879;13880;13881;13882;13883;13884;13885;13886;13887;13888;13889;13890 13880 1594 6 AGGSASAMLQPLLDNQVGFK Unmodified 2003.0146 0.014610792 1107 P20618 PSMB1 Proteasome subunit beta type-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 4.78 3.71 5 1 3 1 3 2 1 2 91.815 88.968 2;3 3.4712E-119 110948 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 249.66 215.66 421960000 15297000 367590000 1791600 0 0 0 0 0 0 0 1900000 0 0 0 35375000 2039 1107 1864 17538;17539;17540;17541;17542;17543;17544;17545;17546 13891;13892;13893;13894;13895;13896;13897;13898 13892 7 AGGTALLPGPPAPSPLPATPLSAK Unmodified 2180.2205 0.22050447 3012 Q6ZSZ5 ARHGEF18 Rho guanine nucleotide exchange factor 18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 1 1 2 2 2 2 2 2 2 2 2 86.885 87.012 2;3 3.4215E-21 100675 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 99.566 94.583 137310000 0 0 0 0 8001100 9370400 10824000 8935200 10514000 17974000 14082000 14485000 8508100 10263000 24351000 2040 3012 1865 17547;17548;17549;17550;17551;17552;17553;17554;17555;17556;17557;17558;17559;17560;17561;17562;17563;17564;17565;17566;17567 13899;13900;13901;13902;13903;13904;13905;13906;13907;13908;13909;13910;13911;13912;13913;13914;13915;13916;13917;13918 13906 20 AGGTDAPSANGEAGGESTK Unmodified 1675.7285 0.72853576 4734 Q9NXW2 DNAJB12 DnaJ homolog subfamily B member 12 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 13.421 13.602 2 5.1261E-05 12738 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 62.924 56.683 22351000 0 0 0 0 1314200 1763600 1832100 1322700 2196100 2959800 2790800 2530700 0 1655400 3985700 2041 4734 1866 17568;17569;17570;17571;17572;17573;17574;17575;17576;17577;17578 13919;13920 13920 2 AGGTGPGEEK Unmodified 901.41412 0.4141249 987 P13798 APEH Acylamino-acid-releasing enzyme yes yes 0 0 0 By MS/MS 1 0 1 1 106.9 112.17 2 1.0281E-05 92943 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 138.06 92.981 27873000 27873000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2042 987 1867 17579 13921 13921 1 AGGVGLNLSAASR Unmodified 1171.6309 0.63093439 2411 Q14527 HLTF Helicase-like transcription factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS 10 0 12 1 2 1 1 1 1 1 1 1 1 1 53.162 53.204 2 3.5842E-14 59709 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 143.96 81.998 2746900000 0 0 0 110370000 164590000 138180000 192770000 205600000 166400000 347410000 346640000 0 371640000 306920000 396340000 2043 2411 1868 17580;17581;17582;17583;17584;17585;17586;17587;17588;17589;17590;17591 13922;13923;13924;13925;13926;13927;13928;13929;13930 13925 9 AGHGPGPGPGRPK Unmodified 1183.621 0.62103841 512 O75528 TADA3 Transcriptional adapter 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 2 1 1 1 1 1 1 2 1 6.3038 6.4084 3 0.0012159 4425 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 61.577 54.559 128690000 0 0 0 5290900 9607100 18729000 11724000 8650000 9924400 7865900 0 15062000 10182000 17687000 13968000 2044 512 1869 17592;17593;17594;17595;17596;17597;17598;17599;17600;17601;17602;17603;17604 13931;13932;13933 13932 3 AGHLILQDR Unmodified 1021.5669 0.56687757 3941 Q96P11 NSUN5 Probable 28S rRNA (cytosine-C(5))-methyltransferase no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 29.991 30.227 2 0.032784 32570 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 47.198 9.1114 137160000 0 0 0 0 6943900 11527000 9257300 7948100 7714800 11413000 13500000 21405000 20535000 10042000 16877000 2045 3941 1870 17605;17606;17607;17608;17609;17610;17611;17612;17613;17614;17615 13934 13934 1 AGHPPAVK Unmodified 775.43407 0.43407249 1651 P51397 DAP Death-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching 2.17 0.373 5 1 2 2 2 6.9588 3.9477 2 0.019762 5702 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 86.512 19.477 4998600000 2215300000 1844700000 938680000 0 0 0 0 0 0 0 0 0 0 0 0 2046 1651 1871 17616;17617;17618;17619;17620;17621 13935;13936;13937 13936 3 AGHSENGVEEDTEGR Unmodified 1585.6605 0.6604562 4782 Q9NZT2 OGFR Opioid growth factor receptor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 9.737 9.8841 3 0.00088548 7871 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.77 36.143 24709000 0 0 0 1928100 1256800 0 1148200 1376800 890280 1729300 4605400 3690100 1818400 1679700 4586100 2047 4782 1872 17622;17623;17624;17625;17626;17627;17628;17629;17630;17631;17632 13938;13939;13940;13941;13942;13943;13944 13939 7 AGHSENGVEEDTEGRTGPK Unmodified 1968.8773 0.87732527 4782 Q9NZT2 OGFR Opioid growth factor receptor yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 8.91 2.75 3 19 1 2 2 1 2 2 1 1 2 1 2 1 2 2 13.713 13.44 3;4 3.6196E-14 18775 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 105.9 95.521 143530000 12849000 0 72452000 3688800 1841700 4571100 3847000 1902500 2735100 4733300 3551000 9758500 3087000 5450600 13060000 2048 4782 1873 17633;17634;17635;17636;17637;17638;17639;17640;17641;17642;17643;17644;17645;17646;17647;17648;17649;17650;17651;17652;17653;17654 13945;13946;13947;13948;13949;13950;13951;13952;13953;13954 13949 8 AGHSLELIEPLIK Unmodified 1418.8133 0.81331543 949 P11473 VDR Vitamin D3 receptor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 84.978 79.856 3 0.0013748 104013 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.515 50.181 57229000 5305300 49288000 2635900 0 0 0 0 0 0 0 0 0 0 0 0 2049 949 1874 17655;17656;17657 13955 13955 1 AGIATQFSTANGQVNLR Unmodified 1746.9013 0.90129559 5074 Q9UQR1 ZNF148 Zinc finger protein 148 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 69.717 69.934 2 5.2128E-05 79783 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.93 84.299 12262000 0 0 0 0 0 4743600 0 0 0 0 0 0 0 0 7518300 2050 5074 1875 17658;17659 13956;13957 13957 2 AGIFQPHVR Unmodified 1023.5614 0.56139826 533 O75694 NUP155 Nuclear pore complex protein Nup155 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 40.552 40.793 2 0.0038946 45621 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 97.068 59.422 67039000 0 0 0 0 3096200 3856900 4392000 5690700 2845500 7293900 6316100 10544000 4785100 7363600 10855000 2051 533 1876 17660;17661;17662;17663;17664;17665;17666;17667;17668;17669;17670 13958;13959;13960;13961;13962;13963;13964;13965;13966 13958 8 AGIICQLNAR Unmodified 1114.5917 0.59171211 1332 P33991 MCM4 DNA replication licensing factor MCM4 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.932 53.075 2 0.0017284 59209 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 89.046 58.485 333480000 0 0 0 7209400 8741700 28369000 9787600 9445800 11215000 27746000 38195000 32491000 30297000 37901000 92085000 2052 1332 1877 17671;17672;17673;17674;17675;17676;17677;17678;17679;17680;17681;17682 13967;13968;13969;13970 13970 4 AGIIQDTWHK Unmodified 1167.6037 0.60365701 4817 Q9P2E9 RRBP1 Ribosome-binding protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 56.324 48.177 3 0.0006318 65746 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 105.4 91.19 22543000 22543000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2053 4817 1878 17683 13971 13971 1 AGIISTVEVLK Unmodified 1128.6754 0.67542497 1771 P55786 NPEPPS Puromycin-sensitive aminopeptidase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.027 78.088 2 0.001189 90688 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 74.464 54.678 128280000 0 0 0 9172800 2947100 4250700 3533700 4479300 1757600 5132100 17485000 11231000 3099000 11041000 54152000 2054 1771 1879 17684;17685;17686;17687;17688;17689;17690;17691;17692;17693;17694;17695 13972;13973;13974;13975;13976;13977 13976 5 AGILFEDIFDVK Acetyl (Protein N-term) 1407.7286 0.72858275 1686 P52434 POLR2H DNA-directed RNA polymerases I, II, and III subunit RPABC3 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS 2 0.756 2 3 2 4 2 1 105.45 102.57 2 0.00016287 124156 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.584 81.06 531540000 300040000 210910000 20592000 0 0 0 0 0 0 0 0 0 0 0 0 2055 1686 1880 17696;17697;17698;17699;17700;17701;17702 13978;13979;13980;13981;13982;13983;13984;13985;13986 13978 9 AGINPFNVPEK Unmodified 1184.619 0.61897272 2108 Q04864 REL Proto-oncogene c-Rel yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 73.238 68.398 2 0.01307 86358 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.243 53.14 103830000 0 103830000 0 0 0 0 0 0 0 0 0 0 0 0 0 2056 2108 1881 17703;17704 13987;13988 13987 1 AGINQNMDAVTEELQAK Unmodified 1830.8782 0.87817689 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 78.237 74.159 2 0.00040134 89149 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 103.88 92.015 73065000 0 73065000 0 0 0 0 0 0 0 0 0 0 0 0 0 2057 5049 1882 17705;17706 13989;13990 13990 2 AGIPVYAWK Unmodified 1003.5491 0.54910224 1164 P23526 AHCY Adenosylhomocysteinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 72.343 72.544 2 0.031208 82795 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.849 32.35 229550000 0 0 0 0 0 9152900 7075900 8211900 5850500 0 0 43471000 0 0 155790000 2058 1164 1883 17707;17708;17709;17710;17711;17712 13991 13991 1 AGIQTEEHPNPGK Unmodified 1376.6684 0.66844211 3500 Q8TDB6 DTX3L E3 ubiquitin-protein ligase DTX3L yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 21.291 17.521 3 0.0026783 21629 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 59.975 51.931 88740000 0 88740000 0 0 0 0 0 0 0 0 0 0 0 0 0 2059 3500 1884 17713;17714 13992 13992 1 AGISFIIK Unmodified 847.51674 0.51673948 1977 P78347 GTF2I General transcription factor II-I yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 76.982 76.239 2 0.025168 87964 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 58.917 6.6861 655690000 226450000 0 0 15959000 0 51726000 32375000 31272000 39528000 62236000 49017000 0 51093000 0 96034000 2060 1977 1885 17715;17716;17717;17718;17719;17720;17721;17722;17723;17724 13993;13994;13995;13996;13997;13998 13993 6 AGITTTLNSR Unmodified 1032.5564 0.55637247 1333 P33992 MCM5 DNA replication licensing factor MCM5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 34.875 35.224 2 0.0040755 39148 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 74.165 49.646 218850000 0 0 0 0 0 14451000 19256000 0 0 19771000 30952000 32763000 24778000 27244000 49636000 2061 1333 1886 17725;17726;17727;17728;17729;17730;17731;17732 13999;14000;14001;14002;14003;14004 13999 3 AGIVTSLQAR Unmodified 1014.5822 0.58219329 1590 P49736 MCM2 DNA replication licensing factor MCM2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.756 47.918 2 0.0021988 53872 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 85.67 42.587 254680000 0 0 0 6237100 8240900 18967000 12594000 11509000 8753300 22562000 31331000 31967000 17323000 23989000 61204000 2062 1590 1887 17733;17734;17735;17736;17737;17738;17739;17740;17741;17742;17743;17744 14005;14006;14007;14008;14009;14010;14011;14012;14013;14014;14015;14016 14007 5 AGKLDPHLVLDQLR Unmodified 1573.894 0.89402537 1356;1357 P35579;P35580 MYH9;MYH10 Myosin-9;Myosin-10 no no 0 0 1 By matching By matching By MS/MS 10 0 3 1 1 1 76.268 76.46 3 0.012401 87732 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.193 30.245 18996000 0 0 0 0 0 0 0 0 0 0 0 4493900 1804000 0 12698000 2063 1356;1357 1888 17745;17746;17747 14017 14017 1 AGKPPCGATK Unmodified 985.5015 0.50150012 4240 Q9BY42 RTFDC1 Protein RTF2 homolog yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 5.789 2.4801 2 0.038483 5328 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.278 48.029 61662000 43005000 18657000 0 0 0 0 0 0 0 0 0 0 0 0 0 2064 4240 1889 17748;17749 14018 14018 1 AGKPPGAEPPSAAAK Unmodified 1347.7147 0.71466402 5191 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.825 17.004 3 0.034115 15819 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 28.146 13.27 54357000 0 0 0 4204200 3672600 5621200 3692600 3981000 4513200 5327500 4391800 4868500 6094900 3440900 4548200 2065 5191 1890 17750;17751;17752;17753;17754;17755;17756;17757;17758;17759;17760;17761 14019;14020 14019 1 AGLAPLEVR Unmodified 924.53927 0.53926584 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 57.472 57.551 2 0.017806 65758 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 55.37 39.226 201290000 0 0 0 11566000 10409000 19395000 12202000 10098000 8136900 19569000 25864000 0 17810000 21374000 44865000 2066 487 1891 17762;17763;17764;17765;17766;17767;17768;17769;17770;17771;17772 14021;14022;14023;14024 14021 3 AGLASPEEEDAVGK Unmodified 1371.6518 0.65178899 5041 Q9UNS1 TIMELESS Protein timeless homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.871 39.051 2 0.00026833 43136 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 79.659 53.275 76823000 0 0 0 5630300 4190400 9337300 0 3224100 4536000 8880400 12923000 8001000 7209100 0 12891000 2067 5041 1892 17773;17774;17775;17776;17777;17778;17779;17780;17781;17782;17783;17784 14025;14026;14027;14028;14029;14030;14031;14032;14033;14034;14035 14029 11 AGLASPEEEDAVGKEPLK Unmodified 1838.9262 0.92617294 5041 Q9UNS1 TIMELESS Protein timeless homolog yes yes 0 0 1 By MS/MS 3 0 1 1 56.552 51.699 3 0.0092391 63787 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 26.808 20.541 2505100 0 2505100 0 0 0 0 0 0 0 0 0 0 0 0 0 2068 5041 1893 17785 14036;14037 14037 2 AGLEDLQVAFR Unmodified 1217.6404 0.64043645 4781 Q9NZT1 CALML5 Calmodulin-like protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 81.481 81.517 2 1.8905E-07 94691 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 146.23 106.19 111590000 0 0 0 36274000 7819100 5838200 4470800 12163000 4566200 19857000 8747600 11857000 0 0 0 2069 4781 1894 17786;17787;17788;17789;17790;17791;17792;17793;17794;17795 14038;14039;14040;14041;14042;14043;14044;14045;14046;14047;14048;14049 14048 12 AGLELLSDQGYR Acetyl (Protein N-term) 1362.6779 0.67794416 4546 Q9NPD3 EXOSC4 Exosome complex component RRP41 yes yes 1 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 87.535 87.646 2 8.7368E-06 101772 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 99.653 88.163 73740000 0 0 0 0 5158400 5490400 4242900 5058700 3932000 8428300 9125400 8469100 0 9148300 14687000 2070 4546 1895 17796;17797;17798;17799;17800;17801;17802;17803;17804;17805 14050;14051;14052;14053;14054;14055;14056;14057 14057 8 AGLENSLAETECR Unmodified 1448.6566 0.6565568 76 CON__P19012;P19012 KRT15 Keratin, type I cytoskeletal 15 yes no 0 0 0 By MS/MS 10 0 1 1 47.967 47.378 2 1.8248E-05 53925 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 110.39 11.445 + 17977000 0 0 0 17977000 0 0 0 0 0 0 0 0 0 0 0 2071 76 1896 17806 14058;14059 14058 2 AGLENTVAETECR Unmodified 1448.6566 0.6565568 73;981 CON__P13646-1;P13646;CON__ENSEMBL:ENSP00000377550 KRT13 Keratin, type I cytoskeletal 13 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 41.611 41.745 2 1.0265E-12 46520 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 160.97 27.742 + 139200000 0 0 0 10110000 0 0 0 65005000 0 0 0 64087000 0 0 0 2072 73;981 1897 17807;17808;17809;17810 14060;14061;14062;14063 14060 4 AGLESGAEPGDGDSDTTK Unmodified 1705.7279 0.72786706 436 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 25.618 25.38 2 1.6395E-32 25943 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 147.18 140.8 193100000 3004400 0 0 20427000 10369000 12133000 13739000 13283000 13756000 17190000 14732000 22367000 16727000 11997000 23374000 2073 436 1898 17811;17812;17813;17814;17815;17816;17817;17818;17819;17820;17821;17822;17823 14064;14065;14066;14067;14068;14069;14070;14071;14072;14073;14074;14075 14067 11 AGLGHPAAFGR Acetyl (Protein N-term) 1094.5621 0.56212655 579 O94760 DDAH1 N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 yes yes 1 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 51.652 52.215 2 0.0040069 58975 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 47.574 31.241 14794000 0 0 0 0 0 0 0 0 0 0 10420000 4374000 0 0 0 2074 579 1899 17824;17825;17826 14076;14077 14077 2 AGLGLGGRPPPQPPREER Unmodified 1883.0126 0.012577377 3010 Q6ZSJ8 C1orf122 Uncharacterized protein C1orf122 yes yes 0 0 2 By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 42.55 42.787 4 0.0063805 47908 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 25.198 9.8058 85969000 0 0 0 0 7783100 8944700 4375300 8094200 0 10604000 5432700 13072000 0 0 27662000 2075 3010 1900 17827;17828;17829;17830;17831;17832;17833;17834 14078;14079;14080 14078 3 AGLGTAMLYELIEK Oxidation (M) 1523.7905 0.79053108 3757 Q96BH1 RNF25 E3 ubiquitin-protein ligase RNF25 yes yes 0 1 0 By MS/MS 2 0 1 1 93.196 85.065 2 0.0029061 110259 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.878 43.879 3368000 3368000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2076 3757 1901 17835 14081 14081 5326 1 AGLLAGDRLVEVNGENVEK Unmodified 1982.0433 0.043268383 209 O14745 SLC9A3R1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.83 3.76 3 2 7 2 2 1 1 1 1 1 1 1 1 72.833 71.034 3 1.9384E-09 92073 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.094 86.275 204880000 71466000 33820000 32629000 0 0 0 0 4830200 0 4221900 8165800 11580000 3613600 6222000 28332000 2077 209 1902 17836;17837;17838;17839;17840;17841;17842;17843;17844;17845;17846;17847 14082;14083;14084;14085;14086;14087;14088;14089;14090;14091 14086 10 AGLLATLQDTQK Unmodified 1257.6929 0.69286595 3495 Q8TD16 BICD2 Protein bicaudal D homolog 2 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 76.708 71.2 2 0.0002649 91866 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 119.75 70.329 88902000 56093000 32809000 0 0 0 0 0 0 0 0 0 0 0 0 0 2078 3495 1903 17848;17849;17850 14092;14093;14094 14094 3 AGLLEPEVFHLNPAK Unmodified 1633.8828 0.88279198 1169 P23786 CPT2 Carnitine O-palmitoyltransferase 2, mitochondrial yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 81.43 81.514 3 0.035959 94429 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 22.857 13.967 35443000 0 0 0 0 1215800 3317500 0 0 3739200 6157500 3894800 4559300 3108700 0 9449700 2079 1169 1904 17851;17852;17853;17854;17855;17856;17857;17858 14095 14095 1 AGLLNTSGTK Unmodified 960.52401 0.52400971 2167 Q08AM6 VAC14 Protein VAC14 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.108 28.303 2 0.0018217 30937 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 96.034 68.329 113720000 0 0 0 6051300 5855400 8875600 8136200 8076400 7817800 9795500 10763000 14868000 11523000 9875300 12078000 2080 2167 1905 17859;17860;17861;17862;17863;17864;17865;17866;17867;17868;17869;17870 14096;14097;14098;14099;14100;14101;14102 14101 6 AGLLQPPVR Unmodified 949.5709 0.57090032 3255 Q8IX12 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 56.744 57.012 2 0.0033916 65343 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 105.12 85.629 392100000 0 0 0 0 0 24583000 40388000 38271000 24900000 32960000 48958000 44713000 44658000 36431000 56235000 2081 3255 1906 17871;17872;17873;17874;17875;17876;17877;17878;17879;17880 14103;14104;14105;14106;14107;14108;14109;14110;14111 14103 9 AGLLQQPPALGR Unmodified 1219.7037 0.70370541 175 O00716 E2F3 Transcription factor E2F3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 66.576 66.728 2 0.024269 75741 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.55 27.858 22589000 0 0 0 0 2359000 0 0 2392000 0 5026300 0 4817100 3419400 0 4575000 2082 175 1907 17881;17882;17883;17884;17885;17886 14112;14113;14114 14113 3 AGLLTEEIR Unmodified 1000.5553 0.55530983 36 A8K2U0 A2ML1 Alpha-2-macroglobulin-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 59.046 59.084 2 0.0079891 68188 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 70.919 35.039 28465000 0 0 0 15695000 0 0 1863200 5890500 0 0 3328700 0 1687700 0 0 2083 36 1908 17887;17888;17889;17890;17891 14115 14115 1 AGLLTEQAPGDTLTAVESK Unmodified 1899.9789 0.97893679 4358 Q9H267 VPS33B Vacuolar protein sorting-associated protein 33B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.717 76.775 2 5.097E-08 88190 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 102.73 82.987 68321000 0 0 0 2539800 3962900 4947900 4296900 4312400 2787900 7857100 9702000 8500900 4700600 6736700 7976300 2084 4358 1909 17892;17893;17894;17895;17896;17897;17898;17899;17900;17901;17902;17903 14116;14117;14118;14119;14120;14121;14122;14123;14124;14125;14126;14127 14119 12 AGLNCSTENMPIK Oxidation (M) 1449.6592 0.65919933 804 P05198 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 2 31.523 31.821 2 2.1031E-08 34218 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 106.62 84.089 47842000 0 0 0 0 3603200 0 0 0 4249100 0 0 14501000 8369000 5241200 11879000 2085 804 1910 17904;17905;17906;17907;17908;17909;17910;17911;17912;17913 14128;14129;14130;14131;14132;14133;14134;14135 14135 964 8 AGLNCSTENMPIK Unmodified 1433.6643 0.66428471 804 P05198 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 50.89 50.31 2 0.011835 57535 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 57.347 43.344 13518000 0 0 0 8520100 4998300 0 0 0 0 0 0 0 0 0 0 2086 804 1910 17914;17915 14136;14137 14136 2 AGLNGLQLAVLAR Unmodified 1294.7721 0.77211932 3983 Q96S55 WRNIP1 ATPase WRNIP1 yes yes 0 0 0 By MS/MS 10 0 1 1 85.803 85.971 2 0.0081379 99355 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.78 47.106 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2087 3983 1911 17916 14138 14138 1 AGLNSLEAVK Acetyl (Protein N-term) 1042.5659 0.56587452 1957 P67936 TPM4 Tropomyosin alpha-4 chain yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.11 3.81 1 4 2 12 3 3 1 1 1 1 1 1 1 1 1 1 1 1 1 75.523 74.336 1;2 2.5021E-06 90168 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 137.14 107.8 1938100000 715340000 105660000 6110000 38112000 55070000 46575000 43246000 45767000 24788000 66271000 171330000 153240000 77598000 134580000 254400000 2088 1957 1912 17917;17918;17919;17920;17921;17922;17923;17924;17925;17926;17927;17928;17929;17930;17931;17932;17933;17934;17935 14139;14140;14141;14142;14143;14144;14145;14146;14147;14148;14149;14150;14151;14152;14153;14154;14155;14156;14157 14149 19 AGLPRSINTDTLSK Unmodified 1471.7995 0.79945628 3460 Q8NHV4 NEDD1 Protein NEDD1 yes yes 0 0 1 By MS/MS 2 0 1 1 59.088 50.863 3 0.024778 69211 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 24.429 8.2061 18912000 18912000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2089 3460 1913 17936 14158 14158 1 AGLQDASGNLVPLEDVHIK Unmodified 1975.0375 0.037454724 4969 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 84.822 81.332 3 0.00010909 101377 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.334 57.665 131090000 0 126840000 4249700 0 0 0 0 0 0 0 0 0 0 0 0 2090 4969 1914 17937;17938;17939 14159;14160 14159 2 AGLQFPVGR Unmodified 943.52395 0.52395013 791;898 P0C0S5;Q71UI9;Q8IUE6;Q99878;Q96KK5;Q9BTM1;Q16777;Q93077;Q7L7L0;Q6FI13;P20671;P0C0S8;P04908;Q96QV6;P16104 H2AFZ;H2AFV;HIST2H2AB;HIST1H2AJ;HIST1H2AH;H2AFJ;HIST2H2AC;HIST1H2AC;HIST3H2A;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AA;H2AFX Histone H2A.Z;Histone H2A.V;Histone H2A type 2-B;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-B/E;Histone H2A type 1-A;Histone H2AX no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.947 64.038 2 0.0032202 74094 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 129.4 71.838 1149600000 0 0 0 156380000 78347000 98067000 95170000 75774000 81658000 88504000 95381000 96170000 98598000 78298000 107220000 2091 898;791 1915 17940;17941;17942;17943;17944;17945;17946;17947;17948;17949;17950;17951 14161;14162;14163;14164;14165;14166;14167;14168;14169;14170;14171;14172;14173;14174 14173 14 AGLSPAEPLLSR Unmodified 1209.6717 0.67173657 656 O95402 MED26 Mediator of RNA polymerase II transcription subunit 26 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 67.073 67.394 2 0.050328 76599 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.606 19.779 7087800 0 0 0 0 0 0 0 0 0 2302700 0 0 0 0 4785100 2092 656 1916 17952;17953 14175 14175 1 AGLSQSLFER Unmodified 1106.572 0.57202253 3683 Q92900 UPF1 Regulator of nonsense transcripts 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.766 63.857 2 0.00053181 72127 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 133.57 56.291 92114000 0 0 0 5254300 3836000 7829600 4666200 6028400 3661100 11430000 7233200 9968600 10203000 6440200 15563000 2093 3683 1917 17954;17955;17956;17957;17958;17959;17960;17961;17962;17963;17964;17965 14176;14177;14178;14179;14180;14181;14182;14183;14184;14185;14186;14187 14179 12 AGLTDQVSHHAR Unmodified 1290.6429 0.64289606 3456 Q8NHH9 ATL2 Atlastin-2 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 18.958 19.139 3 0.0019901 18957 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 61.235 43.099 89109000 0 0 0 6697500 5729300 11876000 0 5876300 0 12300000 11256000 14567000 12605000 8202200 0 2094 3456 1918 17966;17967;17968;17969;17970;17971;17972;17973;17974 14188;14189;14190;14191;14192;14193 14190 5 AGLTFNHDPPLSQNQR Unmodified 1793.8809 0.8808945 3087 Q7Z3U7 MON2 Protein MON2 homolog yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 53.631 53.94 3 0.028686 61025 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 28.549 22.834 21750000 0 0 0 0 0 9808000 0 0 0 0 0 0 0 4975000 6966800 2095 3087 1919 17975;17976;17977 14194 14194 1 AGLTVRDPAVDR Acetyl (Protein N-term) 1310.6943 0.69426293 1329 P33240 CSTF2 Cleavage stimulation factor subunit 2 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 55.798 55.927 2 0.00079677 63252 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 74.841 48.903 371450000 0 0 0 16844000 19169000 20872000 0 27270000 20129000 33588000 44445000 56425000 31540000 37052000 64115000 2096 1329 1920 17978;17979;17980;17981;17982;17983;17984;17985;17986;17987;17988 14195;14196;14197;14198;14199;14200;14201;14202;14203 14196 8 AGLVGPEFHEK Unmodified 1182.6033 0.60332266 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 1 2 2 1 1 1 1 1 2 2 2 42.059 42.27 2;3 0.031398 46009 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.203 14.827 313990000 0 0 0 16484000 14431000 32059000 29484000 5698100 18356000 30542000 27517000 36205000 33767000 21855000 47596000 2097 2501 1921 17989;17990;17991;17992;17993;17994;17995;17996;17997;17998;17999;18000;18001;18002;18003;18004;18005 14204;14205;14206 14204 2 AGLYGLPR Unmodified 845.47594 0.4759373 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 54.327 54.464 2 0.019843 61564 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 63.287 26.731 1552200000 0 0 0 74718000 74204000 175430000 121780000 78622000 83151000 146130000 160270000 171080000 97339000 122780000 246690000 2098 1565 1922 18006;18007;18008;18009;18010;18011;18012;18013;18014;18015;18016;18017 14207;14208;14209;14210;14211;14212;14213 14208 7 AGMQLNLEELQK Oxidation (M) 1388.697 0.69696505 2156 Q08379 GOLGA2 Golgin subfamily A member 2 yes yes 0 1 0 By MS/MS 2 0 1 1 68.393 62.493 2 0.0039087 79781 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.943 45.009 11317000 0 11317000 0 0 0 0 0 0 0 0 0 0 0 0 0 2099 2156 1923 18018 14214 14214 3467 1 AGMQLNLEELQK Unmodified 1372.7021 0.70205043 2156 Q08379 GOLGA2 Golgin subfamily A member 2 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 76.251 76.35 2 0.0061623 88079 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 51.927 27.583 41250000 0 0 0 0 2798200 3035600 2071600 3867500 2579800 3854800 7074500 0 3623800 4965000 7379000 2100 2156 1923 18019;18020;18021;18022;18023;18024;18025;18026;18027;18028 14215;14216;14217 14216 3 AGMSAEQAQGLLEK Unmodified 1431.7028 0.70277871 5112 Q9Y2Q3 GSTK1 Glutathione S-transferase kappa 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 60.601 59.931 2 4.1348E-12 67534 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 128.01 103.98 351650000 0 126780000 0 12249000 13796000 17248000 17665000 18545000 10111000 21733000 20437000 25183000 18845000 16577000 32480000 2101 5112 1924 18029;18030;18031;18032;18033;18034;18035;18036;18037;18038;18039;18040;18041;18042 14218;14219;14220;14221;14222;14223;14224;14225;14226;14227;14228;14229;14230 14226 13 AGMSAEQAQGLLEK Oxidation (M) 1447.6977 0.69769333 5112 Q9Y2Q3 GSTK1 Glutathione S-transferase kappa 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 44.529 43.75 2 5.2092E-34 55303 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 155.48 126.01 180510000 0 30283000 0 13548000 6368000 18145000 17370000 10549000 7759600 21026000 14475000 25488000 15496000 0 0 2102 5112 1924 18043;18044;18045;18046;18047;18048;18049;18050;18051;18052;18053;18054;18055;18056 14231;14232;14233;14234;14235;14236;14237;14238;14239;14240;14241;14242;14243;14244 14235 6503 13 AGMTHIVR Unmodified 883.46981 0.46980607 1402 P39023 RPL3 60S ribosomal protein L3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 18.192 18.318 2 0.030197 18764 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 55.676 38.749 73851000 0 0 0 6109200 5928600 5505000 6290100 6626800 4060900 11167000 12219000 15944000 0 0 0 2103 1402 1925 18057;18058;18059;18060;18061;18062;18063;18064;18065 14245;14246;14247;14248 14245 2 AGMTHIVR Oxidation (M) 899.46472 0.46472069 1402 P39023 RPL3 60S ribosomal protein L3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 7.3285 7.4368 2 0.0031767 5803 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 113.89 90.365 119620000 0 0 0 8816900 8386400 8270500 0 0 5554600 18569000 0 24157000 19163000 12042000 14664000 2104 1402 1925 18066;18067;18068;18069;18070;18071;18072;18073;18074 14249;14250;14251 14251 2186 3 AGNALTPELAPVQIK Unmodified 1520.8562 0.85624288 899 P0C1Z6 TFPT TCF3 fusion partner yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 77.752 77.781 2 0.0019482 89935 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 64.439 60.676 40073000 0 0 0 2966700 3561400 0 4021600 0 0 0 4368600 9425900 3244300 3588100 8896200 2105 899 1926 18075;18076;18077;18078;18079;18080;18081;18082 14252;14253;14254 14254 3 AGNASKDEIDSAVK Unmodified 1403.6892 0.68923713 1155 P23381 WARS Tryptophan--tRNA ligase, cytoplasmic;T1-TrpRS;T2-TrpRS yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.05 3.38 4 1 15 2 3 1 2 1 1 1 2 2 1 2 2 22.812 21.697 2;3 2.2893E-18 26914 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 120.53 96.85 797520000 26713000 562240000 0 0 0 0 17529000 9609100 5222500 0 11201000 45790000 18372000 39181000 61666000 2106 1155 1927 18083;18084;18085;18086;18087;18088;18089;18090;18091;18092;18093;18094;18095;18096;18097;18098;18099;18100;18101;18102 14255;14256;14257;14258;14259;14260;14261;14262;14263;14264;14265;14266;14267;14268;14269 14260 14 AGNDPGVAPGGTGGGLLYGR Unmodified 1784.8806 0.88056015 332 O43474 KLF4 Krueppel-like factor 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.722 63.814 2 1.5006E-58 72242 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 163.27 148.07 165400000 0 0 0 10145000 8982400 11064000 10715000 10978000 10400000 17306000 17352000 18737000 14598000 14149000 20975000 2107 332 1928 18103;18104;18105;18106;18107;18108;18109;18110;18111;18112;18113;18114 14270;14271;14272;14273;14274;14275;14276;14277;14278;14279;14280;14281 14273 12 AGNELLESSAGDDASSLR Unmodified 1790.8282 0.82824981 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 58.723 58.767 2 1.4486E-19 67054 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 99.531 84.84 51757000 0 0 0 3798000 4047000 6673400 5036300 3099700 0 7153500 8875600 7413300 5660500 0 0 2108 5049 1929 18115;18116;18117;18118;18119;18120;18121;18122;18123;18124 14282;14283;14284;14285;14286;14287;14288;14289;14290;14291 14282 10 AGNGQWASVIR Unmodified 1157.5942 0.59415496 2528 Q15393 SF3B3 Splicing factor 3B subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 2 1 1 1 1 1 1 1 56.957 57.08 2 1.6518E-07 64159 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 146.88 121.96 267450000 0 0 0 16165000 13894000 21503000 16678000 14722000 11805000 18965000 30500000 36755000 20592000 23793000 42080000 2109 2528 1930 18125;18126;18127;18128;18129;18130;18131;18132;18133;18134;18135;18136;18137 14292;14293;14294;14295;14296;14297;14298;14299;14300;14301;14302;14303;14304 14302 13 AGNILFTLDGDIK Unmodified 1375.7347 0.73473076 4365 Q9H2G2 SLK STE20-like serine/threonine-protein kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 1 4 1 91.579 86.832 2 8.8315E-10 109225 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.83 55.484 243170000 19189000 218400000 5581800 0 0 0 0 0 0 0 0 0 0 0 0 2110 4365 1931 18138;18139;18140;18141;18142;18143 14305;14306;14307;14308;14309;14310;14311 14306 7 AGNILLNTEGHAK Unmodified 1336.7099 0.709913 2250;2227 Q13188;Q13043 STK3;STK4 Serine/threonine-protein kinase 3;Serine/threonine-protein kinase 3 36kDa subunit;Serine/threonine-protein kinase 3 20kDa subunit;Serine/threonine-protein kinase 4;Serine/threonine-protein kinase 4 37kDa subunit;Serine/threonine-protein kinase 4 18kDa subunit no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.58 6 1 17 2 3 2 1 1 1 1 1 1 1 2 2 2 2 2 40.815 39.401 2;3 5.7011E-34 55975 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 176.95 136.95 957020000 289760000 237470000 135200000 15708000 11590000 20368000 17687000 14432000 13385000 24891000 42180000 36929000 28995000 25061000 43368000 2111 2250;2227 1932 18144;18145;18146;18147;18148;18149;18150;18151;18152;18153;18154;18155;18156;18157;18158;18159;18160;18161;18162;18163;18164;18165;18166;18167 14312;14313;14314;14315;14316;14317;14318;14319;14320;14321;14322;14323;14324;14325;14326;14327;14328;14329;14330;14331;14332 14325 15 AGNILLTEPGQVK Unmodified 1338.7507 0.75071518 4369;3057 Q9H2K8;Q7L7X3 TAOK3;TAOK1 Serine/threonine-protein kinase TAO3;Serine/threonine-protein kinase TAO1 no no 0 0 0 By MS/MS 2.5 0.5 1 1 2 68.623 63.346 2 0.005173 81035 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.029 65.311 220260000 0 220260000 0 0 0 0 0 0 0 0 0 0 0 0 0 2112 4369;3057 1933 18168;18169 14333;14334 14333 0 AGNLGGGVVTIER Unmodified 1241.6728 0.67279921 1350 P35268 RPL22 60S ribosomal protein L22 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 54.565 54.32 2 0.0010494 61386 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 77.64 50.386 905730000 0 11058000 0 96794000 66478000 56375000 74721000 61845000 47966000 63699000 87383000 99216000 67693000 65680000 106820000 2113 1350 1934 18170;18171;18172;18173;18174;18175;18176;18177;18178;18179;18180;18181;18182 14335;14336;14337;14338;14339;14340;14341;14342;14343;14344;14345;14346;14347;14348 14346 8 AGNLGGGVVTIERSK Unmodified 1456.7998 0.79979063 1350 P35268 RPL22 60S ribosomal protein L22 yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 52.531 45.85 2;3 0.0012716 62928 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.417 83.37 163600000 156880000 0 6717500 0 0 0 0 0 0 0 0 0 0 0 0 2114 1350 1935 18183;18184;18185 14349;14350;14351 14351 3 AGNNMLLVGVHGPR Unmodified 1433.7562 0.75615168 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 60.64 60.727 3 0.0034687 68542 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.628 49.984 175650000 0 0 0 0 9981400 25545000 0 0 13443000 0 0 0 0 30442000 96242000 2115 1124 1936 18186;18187;18188;18189;18190 14352;14353;14354;14355;14356;14357 14353 4 AGNNMLLVGVHGPR Oxidation (M) 1449.7511 0.7510663 1124 P21333 FLNA Filamin-A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 48.53 48.862 3 0.0013603 55355 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 44.829 31.428 468890000 0 0 0 0 0 50709000 29386000 0 27942000 59556000 63736000 74842000 59629000 0 103090000 2116 1124 1936 18191;18192;18193;18194;18195;18196;18197;18198 14358;14359;14360 14358 1608 2 AGNWPGSPQVSGPSPAAR Unmodified 1734.8438 0.84378071 387 O60244 MED14 Mediator of RNA polymerase II transcription subunit 14 yes yes 0 0 0 By MS/MS 10 0 1 1 55.979 56.146 2 0.0079738 63886 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 35.737 29.496 2263100 0 0 0 0 0 0 0 2263100 0 0 0 0 0 0 0 2117 387 1937 18199 14361 14361 1 AGPAEAVAGQQK Unmodified 1125.5778 0.57783619 2709 Q53T59 HS1BP3 HCLS1-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 18.74 17.4 2 0.00041538 21831 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.178 47.162 22174000 0 10742000 0 0 0 5689100 0 0 2512100 0 3230500 0 0 0 0 2118 2709 1938 18200;18201;18202;18203;18204;18205;18206;18207;18208;18209 14362;14363;14364;14365;14366;14367;14368 14365 7 AGPARDPGPDPGPGPDPAAR Unmodified 1866.8973 0.89727285 2957 Q6PJ69 TRIM65 Tripartite motif-containing protein 65 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 32.567 33.289 3 4.9765E-11 35921 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 65.47 61.227 14750000 0 0 0 0 0 0 0 0 0 0 0 5388300 0 0 9361300 2119 2957 1939 18210;18211;18212;18213 14369;14370;14371;14372 14372 4 AGPATTTSSETR Unmodified 1177.5575 0.55749468 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 8.0237 8.1507 2 2.3882E-05 5839 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 115.78 88.154 128390000 0 0 0 5318500 4770600 5238800 4293200 6859200 5842700 10368000 23995000 24215000 11532000 9222100 16736000 2120 3443 1940 18214;18215;18216;18217;18218;18219;18220;18221;18222;18223;18224;18225 14373;14374;14375;14376;14377;14378;14379;14380;14381;14382;14383;14384 14378 7 AGPDLPSLPSHALEDEGWAAAAPSPGSAR Unmodified 2826.3573 0.35728531 4383 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8 3.46 2 6 1 1 1 1 1 1 1 1 85.268 84.062 3 2.1792E-43 97369 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 95.646 89.141 146410000 14765000 0 1982500 0 0 0 0 11160000 0 27378000 26239000 15019000 0 7379500 42490000 2121 4383 1941 18226;18227;18228;18229;18230;18231;18232;18233 14385;14386;14387;14388;14389;14390;14391;14392 14385 7 AGPEPQELQGIR Unmodified 1293.6677 0.66771383 2340 Q13671 RIN1 Ras and Rab interactor 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 51.126 51.283 2 3.2654E-06 58181 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 111.46 95.317 157960000 0 0 0 10502000 11705000 0 14050000 15909000 0 16747000 20274000 23183000 10611000 13413000 21563000 2122 2340 1942 18234;18235;18236;18237;18238;18239;18240;18241;18242;18243 14393;14394;14395;14396 14393 4 AGPEQELTR Unmodified 999.49852 0.49852324 2005 P83436 COG7 Conserved oligomeric Golgi complex subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.551 24.753 2 0.003237 26577 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 90.709 57.868 73014000 0 0 0 4509700 4285000 6360900 4315900 4029000 3102700 6246900 4322600 8163500 5976600 7354000 14347000 2123 2005 1943 18244;18245;18246;18247;18248;18249;18250;18251;18252;18253;18254;18255 14397;14398;14399;14400;14401;14402;14403 14397 7 AGPESDAQYQFTGIK Unmodified 1610.7577 0.75765105 3883 Q96IX5 USMG5 Up-regulated during skeletal muscle growth protein 5 yes yes 0 0 0 By MS/MS 2 0 1 1 66.667 60.75 2 1.2514E-44 77644 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 155.24 144.02 52957000 0 52957000 0 0 0 0 0 0 0 0 0 0 0 0 0 2124 3883 1944 18256 14404;14405 14405 2 AGPFDEFQIATMLK Oxidation (M) 1582.7701 0.77012999 4811 Q9P289 STK26 Serine/threonine-protein kinase 26 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 88.284 88.384 2 9.2653E-05 102898 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 82.505 64.685 48213000 0 0 0 0 1831500 5033200 3291600 1019800 0 7642500 6437100 5977200 2112500 2953200 11914000 2125 4811 1945 18257;18258;18259;18260;18261;18262;18263;18264;18265;18266 14406;14407;14408;14409;14410;14411;14412;14413;14414;14415;14416 14415 6174 11 AGPGSEELTVTNAR Unmodified 1400.6896 0.68957148 4199 Q9BW19 KIFC1 Kinesin-like protein KIFC1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 41.08 41.271 2 0.0003604 46680 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 75.695 42.317 97425000 0 0 0 7221300 7104700 0 8754300 7986000 6727900 8903700 9358200 8938100 10803000 6837100 14791000 2126 4199 1946 18267;18268;18269;18270;18271;18272;18273;18274;18275;18276;18277 14417;14418;14419;14420;14421;14422 14421 6 AGPGSLELCGLPSQK Unmodified 1512.7606 0.76062794 2432 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B yes yes 0 0 0 By MS/MS 2 0 1 1 74.951 70.01 2 0.0055692 87707 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.326 60.435 25817000 0 25817000 0 0 0 0 0 0 0 0 0 0 0 0 0 2127 2432 1947 18278 14423 14423 1 AGPGTLSVTIEGPSK Unmodified 1412.7511 0.75110911 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 63.265 63.411 2 6.7334E-23 71936 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 120.57 103.55 114990000 0 0 0 9695500 0 8683000 5714000 0 4571200 9861900 15470000 13927000 7274300 13375000 26414000 2128 487 1948 18279;18280;18281;18282;18283;18284;18285;18286;18287;18288;18289 14424;14425;14426;14427;14428;14429;14430;14431;14432;14433;14434;14435;14436;14437;14438 14430 15 AGPIWDLR Unmodified 926.4974 0.49740102 322;407 O43390;O60506 HNRNPR;SYNCRIP Heterogeneous nuclear ribonucleoprotein R;Heterogeneous nuclear ribonucleoprotein Q no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.2 72.271 2 0.030437 82994 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 55.531 43.174 170570000 0 0 0 15173000 9885700 11815000 10631000 20628000 8126400 14624000 12730000 14243000 14984000 14028000 23701000 2129 322;407 1949 18290;18291;18292;18293;18294;18295;18296;18297;18298;18299;18300;18301 14439;14440;14441 14440 3 AGPNASIISLK Unmodified 1069.6132 0.61315906 4319 Q9H0A0 NAT10 N-acetyltransferase 10 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.08 3.33 2 1 9 1 2 1 1 1 1 1 1 1 1 1 63.034 61.454 2 0.00047031 79088 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.48 61.685 119250000 9629900 20132000 0 3237000 3949900 4182300 19113000 22215000 19370000 8187700 6860900 0 0 2370900 0 2130 4319 1950 18302;18303;18304;18305;18306;18307;18308;18309;18310;18311;18312;18313 14442;14443;14444;14445;14446;14447;14448;14449;14450 14445 9 AGPPAPAPPAPIPPPAPSQSSPPEQPQSMEMR Unmodified 3213.5587 0.55870401 3542 Q8WUF5 PPP1R13L RelA-associated inhibitor yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 78.331 78.516 3 0.0037571 90797 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 20.452 18.257 6986700 0 0 0 0 0 0 0 0 0 0 3529700 3457000 0 0 0 2131 3542 1951 18314;18315 14451 14451 1 AGPPASIVPLMR Unmodified 1207.6747 0.67471346 714 O96013 PAK4 Serine/threonine-protein kinase PAK 4 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 79.185 79.197 2 0.00056515 91020 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.677 60.292 34550000 0 0 0 4393000 2476100 4163600 3068100 0 0 3968300 5151300 0 0 4252000 7078000 2132 714 1952 18316;18317;18318;18319;18320;18321;18322;18323 14452;14453;14454;14455;14456;14457 14455 6 AGPSAQEPGSQTPLK Unmodified 1466.7365 0.73652168 391 O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 33.892 32.829 2 3.652E-49 36351 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 202.16 182.4 203110000 12071000 30470000 2256500 8292400 5286100 10899000 11634000 7322600 8275100 13466000 22467000 16275000 13288000 13674000 27433000 2133 391 1953 18324;18325;18326;18327;18328;18329;18330;18331;18332;18333;18334;18335;18336;18337;18338;18339 14458;14459;14460;14461;14462;14463;14464;14465;14466;14467;14468;14469;14470 14460 13 AGPSGATAGASGR Unmodified 1058.5105 0.51048491 4999 Q9ULL5 PRR12 Proline-rich protein 12 yes yes 0 0 0 By MS/MS 10 0 1 1 7.3229 7.566 2 0.00099438 4626 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 86.014 30.553 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2134 4999 1954 18340 14471 14471 1 AGPSQHSSPAVSDSLPSNSLK Unmodified 2065.0076 0.0076111585 2246 Q13163 MAP2K5 Dual specificity mitogen-activated protein kinase kinase 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 47.382 47.748 3 8.7954E-05 53853 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 49.528 39.428 36762000 0 0 0 0 0 5739000 5236200 0 0 5336500 4289300 6668700 0 0 9492800 2135 2246 1955 18341;18342;18343;18344;18345;18346 14472;14473;14474;14475 14474 4 AGPSYSMPVHAAVQMTTEQLK 2 Oxidation (M) 2277.077 0.076953052 2411 Q14527 HLTF Helicase-like transcription factor yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 61.685 61.861 3 2.5396E-21 70312 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 92.932 84.744 359400000 0 0 0 0 18765000 40790000 0 35599000 24768000 49251000 44472000 52213000 25408000 35072000 33065000 2136 2411 1956 18347;18348;18349;18350;18351;18352;18353;18354;18355;18356 14476;14477;14478;14479;14480;14481;14482;14483;14484;14485;14486;14487;14488 14487 3955;3956 12 AGPSYSMPVHAAVQMTTEQLK Unmodified 2245.0871 0.087123808 2411 Q14527 HLTF Helicase-like transcription factor yes yes 0 0 0 By MS/MS 10 0 1 1 78.269 78.457 3 0.026053 90653 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 22.763 14.866 4176000 0 0 0 0 0 0 0 4176000 0 0 0 0 0 0 0 2137 2411 1956 18357 14489 14489 1 AGPVAVQVK Unmodified 867.5178 0.51780212 2289 Q13428 TCOF1 Treacle protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 33.124 32.06 2 0.0049227 34777 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 85.265 34.367 1149100000 24811000 378080000 6167500 41771000 40195000 41241000 44742000 44098000 31551000 62261000 92137000 110330000 68638000 66377000 96717000 2138 2289 1957 18358;18359;18360;18361;18362;18363;18364;18365;18366;18367;18368;18369;18370;18371;18372;18373 14490;14491;14492;14493;14494;14495;14496;14497;14498;14499;14500;14501;14502;14503;14504;14505 14498 15 AGPVVVVAPGPPVTTATSAPVTLVAPGEAR Unmodified 2780.5436 0.54362952 2686 Q4KMP7 TBC1D10B TBC1 domain family member 10B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 89.196 89.297 3 3.7798E-33 103445 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.296 43.789 26536000 0 0 0 0 3449900 2130100 1864100 0 1375400 3895400 2907100 4329200 0 1952100 4632900 2139 2686 1958 18374;18375;18376;18377;18378;18379;18380;18381;18382 14506;14507;14508;14509;14510;14511;14512;14513;14514;14515;14516;14517;14518;14519 14511 14 AGQAATLALGDFDR Unmodified 1404.6997 0.69974224 4217 Q9BX10 GTPBP2 GTP-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 74.193 74.236 2 3.8109E-08 85464 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 96.229 77.918 36839000 0 0 0 3286600 3313500 0 2863500 0 0 4288700 4271500 6481100 3981000 3708100 4645200 2140 4217 1959 18383;18384;18385;18386;18387;18388;18389;18390;18391 14520;14521;14522;14523;14524;14525;14526;14527;14528 14521 9 AGQAFRK Acetyl (Protein N-term) 818.43989 0.43988615 1853 P61604 HSPE1 10 kDa heat shock protein, mitochondrial yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 20.53 19.522 2 0.0056119 26932 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 124.32 77.557 983310000 723000000 53799000 0 0 5118600 0 0 0 0 0 44670000 27613000 0 31772000 97333000 2141 1853 1960 18392;18393;18394;18395;18396;18397;18398;18399 14529;14530;14531;14532;14533 14531 2 AGQAVDDFIEK Unmodified 1191.5772 0.57716749 1680 P52209 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS 7.65 3.66 1 3 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 57.226 56.297 2 9.8219E-05 94064 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 112.71 84.493 4013300000 128820000 3176100000 37674000 10884000 8213300 23059000 18444000 13990000 13732000 15356000 125880000 97832000 21893000 41232000 280260000 2142 1680 1961 18400;18401;18402;18403;18404;18405;18406;18407;18408;18409;18410;18411;18412;18413;18414;18415;18416 14534;14535;14536;14537;14538;14539;14540;14541;14542;14543 14539 9 AGQCVIGLQMGTNK Unmodified 1475.7225 0.72246829 4008 Q99439 CNN2 Calponin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 8.08 3.33 2 1 9 1 2 1 1 1 1 1 1 1 1 1 62.007 60.412 2 1.4946E-11 69518 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 99.215 84.549 169740000 10084000 75290000 0 6637700 5686700 8276400 6953900 8488700 9563300 14517000 0 0 11011000 13225000 0 2143 4008 1962 18417;18418;18419;18420;18421;18422;18423;18424;18425;18426;18427;18428 14544;14545;14546;14547;14548;14549;14550;14551;14552;14553 14553 9 AGQCVIGLQMGTNK Oxidation (M) 1491.7174 0.71738291 4008 Q99439 CNN2 Calponin-2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 45.035 43.547 2 3.9157E-09 55371 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.06 84.414 53209000 0 38098000 0 0 3740600 0 5330100 0 6040300 0 0 0 0 0 0 2144 4008 1962 18429;18430;18431;18432;18433;18434;18435 14554;14555;14556;14557;14558 14554 5489 5 AGQEDPVQR Acetyl (Protein N-term) 1040.4887 0.48868683 3552 Q8WUW1 BRK1 Protein BRICK1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 26.26 26.46 2 0.011161 28015 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 46.462 29.791 66253000 0 0 0 0 5082900 9052000 6993000 5339300 0 7714300 9896100 0 7444000 6189800 8541300 2145 3552 1963 18436;18437;18438;18439;18440;18441;18442;18443;18444 14559;14560 14559 2 AGQEEGQPPAEGLAAASVVMAADR Unmodified 2324.1067 0.10667328 4339 Q9H0U9 TSPYL1 Testis-specific Y-encoded-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 83.401 83.495 3 0.00041168 96374 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.414 24.914 47872000 0 0 0 0 2468900 2483300 2119900 5706400 0 7914800 9668400 0 0 6212700 11298000 2146 4339 1964 18445;18446;18447;18448;18449;18450;18451;18452 14561;14562;14563;14564;14565 14563 4 AGQERPSVTSYK Unmodified 1321.6626 0.66262845 4944 Q9UJX3 ANAPC7 Anaphase-promoting complex subunit 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 20.853 20.61 2;3 8.299E-06 21115 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 89.301 56.971 666320000 0 0 36200000 28887000 37716000 48874000 47280000 32798000 41417000 48079000 100260000 70200000 44914000 51773000 77913000 2147 4944 1965 18453;18454;18455;18456;18457;18458;18459;18460;18461;18462;18463;18464;18465;18466 14566;14567;14568;14569;14570;14571;14572;14573;14574;14575;14576;14577;14578;14579;14580 14567 15 AGQGTSAPPEASPTAAPESSTSFPPAPTSGMSHPPPAAREDK Oxidation (M) 4086.8865 0.88651633 1745 P54725 RAD23A UV excision repair protein RAD23 homolog A yes yes 0 1 1 By matching By MS/MS 2 0 2 1 1 63.038 57.009 4 1.3671E-38 71084 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 67.062 65.624 23204000 6250400 0 16954000 0 0 0 0 0 0 0 0 0 0 0 0 2148 1745 1966 18467;18468 14581 14581 2834 1 AGQILQAELLAVYGADPGTQDSSGK Unmodified 2488.2445 0.24454697 2382 Q14161 GIT2 ARF GTPase-activating protein GIT2 yes yes 0 0 0 By MS/MS 3 0 1 1 92.276 89.056 3 0.0081519 106747 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 19.737 17.434 2057100 0 2057100 0 0 0 0 0 0 0 0 0 0 0 0 0 2149 2382 1967 18469 14582 14582 1 AGQLDSNQRDR Unmodified 1258.6014 0.60142518 3432 Q8NEY1 NAV1 Neuron navigator 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 6.4011 6.5074 3 0.0088098 4329 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 39.266 29.578 27460000 0 0 0 2677900 2448700 2249300 2828200 2823200 3383200 1760300 3805000 2834700 0 0 2650100 2150 3432 1968 18470;18471;18472;18473;18474;18475;18476;18477;18478;18479 14583;14584 14583 2 AGQPHSSSDAAQAPAEQPHSSSDAAQAPCPR Unmodified 3112.3653 0.36530059 1246 P29372 MPG DNA-3-methyladenine glycosylase yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 27.338 28.03 4 7.8581E-15 29213 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.783 40.88 14784000 0 0 0 0 0 0 0 0 0 0 0 7039500 0 0 7744900 2151 1246 1969 18480;18481 14585;14586 14585 2 AGQSAAGAAPGGGVDTR Unmodified 1441.691 0.69096847 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.14 20.341 2 3.3593E-41 19785 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 147.96 133.29 211700000 0 0 0 8276500 9505600 21022000 12097000 8977400 9092900 23140000 30073000 32871000 1751300 18751000 36144000 2152 1124 1970 18482;18483;18484;18485;18486;18487;18488;18489;18490;18491;18492;18493 14587;14588;14589;14590;14591;14592;14593 14589 7 AGQSAAGAAPGGGVDTRDAEMPATEK Unmodified 2414.1132 0.11321522 1124 P21333 FLNA Filamin-A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 42.873 41.465 3 8.6583E-28 45808 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.339 84.286 107930000 6598300 38425000 0 2471900 3103600 7271400 3710100 0 3056600 6284700 8281200 0 0 10545000 18185000 2153 1124 1971 18494;18495;18496;18497;18498;18499;18500;18501;18502;18503;18504;18505;18506;18507 14594;14595;14596;14597;14598;14599;14600;14601;14602;14603;14604;14605;14606;14607 14598 14 AGQSAAGAAPGGGVDTRDAEMPATEK Oxidation (M) 2430.1081 0.10812984 1124 P21333 FLNA Filamin-A yes yes 0 1 1 By MS/MS 2 0 1 1 35.315 30.559 3 5.4185E-05 39835 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 47.018 38.83 20763000 0 20763000 0 0 0 0 0 0 0 0 0 0 0 0 0 2154 1124 1971 18508 14608 14608 1609 1 AGQTITVATHAK Unmodified 1196.6513 0.65133548 2935 Q6P4R8 NFRKB Nuclear factor related to kappa-B-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 20.257 20.472 3 0.031657 20562 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 23.179 0.70016 89080000 0 0 0 0 7206400 0 9985500 9018200 0 19264000 13318000 14629000 0 15659000 0 2155 2935 1972 18509;18510;18511;18512;18513;18514;18515 14609;14610 14610 1 AGQTQPNPGILPIQPALTPR Unmodified 2068.1429 0.14292285 2651 Q2M2I8 AAK1 AP2-associated protein kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 83.93 83.994 3 5.0574E-53 97124 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 94.45 85.704 185890000 0 0 0 10041000 14334000 20929000 16435000 15181000 11400000 18834000 15466000 19956000 11746000 12890000 18674000 2156 2651 1973 18516;18517;18518;18519;18520;18521;18522;18523;18524;18525;18526;18527 14611;14612;14613;14614;14615;14616;14617;14618;14619;14620;14621;14622;14623;14624 14618 14 AGQVAYLEK Unmodified 977.5182 0.51819605 4580;5006;5204 Q9NQX4;Q9ULV0;Q9Y4I1 MYO5C;MYO5B;MYO5A Unconventional myosin-Vc;Unconventional myosin-Vb;Unconventional myosin-Va no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 33.937 33.719 2 0.020773 36606 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 82.279 42.176 12454000 0 0 0 0 6226100 6227700 0 0 0 0 0 0 0 0 0 2157 4580;5006;5204 1974 18528;18529;18530;18531 14625;14626;14627;14628 14626 4 AGQVFLEELGNHK Unmodified 1440.7361 0.73612775 888 P09543 CNP 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.72 2.93 4 21 2 1 1 1 1 2 2 1 2 2 2 2 2 2 2 68.015 67.067 2;3 1.0888E-41 76830 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 140.14 124.75 733900000 204660000 100310000 19768000 20037000 15615000 45515000 31959000 32381000 24309000 26948000 51078000 39171000 37325000 28595000 56240000 2158 888 1975 18532;18533;18534;18535;18536;18537;18538;18539;18540;18541;18542;18543;18544;18545;18546;18547;18548;18549;18550;18551;18552;18553;18554;18555;18556 14629;14630;14631;14632;14633;14634;14635;14636;14637;14638;14639;14640;14641;14642;14643;14644;14645;14646;14647;14648 14645 19 AGRCADYVVTGAWSAK Unmodified 1710.8148 0.81478877 5261 Q9Y617 PSAT1 Phosphoserine aminotransferase yes yes 0 0 1 By MS/MS 2 0 1 1 66.706 58.411 3 0.01059 78263 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.856 33.785 41072000 41072000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2159 5261 1976 18557 14649 14649 1 AGREFPEADAEK Unmodified 1318.6153 0.61534391 202 O14686 KMT2D Histone-lysine N-methyltransferase 2D yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 24.796 24.135 3 0.0036649 25462 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 43.761 27.624 59883000 0 11078000 9526500 0 4052500 0 4723600 0 4580600 5821600 5390500 0 0 6431200 8278900 2160 202 1977 18558;18559;18560;18561;18562;18563;18564;18565;18566 14650;14651;14652;14653;14654;14655 14652 3 AGRIPEQILGK Unmodified 1180.6928 0.69280637 2079 Q02750 MAP2K1 Dual specificity mitogen-activated protein kinase kinase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 50.084 49.046 2;3 0.00441 54862 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 45.433 28.221 402210000 121480000 0 0 10250000 11567000 41287000 18499000 15449000 16423000 32167000 29853000 20661000 22480000 22155000 39936000 2161 2079 1978 18567;18568;18569;18570;18571;18572;18573;18574;18575;18576;18577;18578;18579;18580 14656;14657;14658;14659;14660;14661;14662;14663;14664;14665;14666;14667;14668 14656 10 AGRPVMPPPQVPLPTSSISPAK Unmodified 2226.2195 0.21945861 1462 P42684 ABL2 Abelson tyrosine-protein kinase 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 77.765 77.918 3 4.5623E-05 89993 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 47.392 43.93 39764000 0 0 0 0 0 0 0 0 0 8144700 7541000 0 4245700 5246900 14585000 2162 1462 1979 18581;18582;18583;18584;18585;18586 14669;14670;14671;14672;14673 14670 5 AGRPVMPPPQVPLPTSSISPAK Oxidation (M) 2242.2144 0.21437323 1462 P42684 ABL2 Abelson tyrosine-protein kinase 2 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 72.794 72.914 3 8.5867E-09 84004 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 63.125 41.924 86844000 0 0 0 0 13755000 0 10319000 0 0 9545800 12488000 17888000 10418000 0 12429000 2163 1462 1979 18587;18588;18589;18590;18591;18592;18593 14674;14675;14676;14677;14678;14679;14680;14681 14680 2292 8 AGSALPGFANSPAGSTSVVLVPPAHGTLVPDGNK Unmodified 3184.6517 0.65167642 242 O15027 SEC16A Protein transport protein Sec16A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 85.997 86.148 3 6.3007E-14 99649 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.583 37.981 45873000 0 0 0 0 0 0 0 5111500 0 9922000 5824200 5696600 0 3471500 15847000 2164 242 1980 18594;18595;18596;18597;18598;18599 14682;14683;14684;14685;14686;14687;14688 14685 7 AGSDGESIGNCPFSQR Unmodified 1680.7162 0.71619694 5270 Q9Y696 CLIC4 Chloride intracellular channel protein 4 yes yes 0 0 0 By MS/MS 10 0 1 1 45.103 45.844 2 0.00011572 50497 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.46 60.041 9922800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9922800 2165 5270 1981 18600 14689 14689 1 AGSEECVFYTDETASPLAPDLAK Unmodified 2470.121 0.12098594 3035 Q765P7 MTSS1L MTSS1-like protein yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 82.465 82.588 2 0.0069681 95642 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 35.303 35.303 6358700 0 0 0 0 0 0 0 0 0 4124800 0 2233900 0 0 0 2166 3035 1982 18601;18602 14690 14690 1 AGSEGLQQVVGMK Unmodified 1302.6602 0.66018561 3606 Q8WZA9 IRGQ Immunity-related GTPase family Q protein yes yes 0 0 0 By MS/MS 2 0 1 1 64.261 58.353 2 0.004039 74647 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.201 66.204 66775000 0 66775000 0 0 0 0 0 0 0 0 0 0 0 0 0 2167 3606 1983 18603 14691 14691 1 AGSEQQRPR Acetyl (Protein N-term) 1069.5265 0.52646932 3341 Q8N584 TTC39C Tetratricopeptide repeat protein 39C yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.4475 7.5754 2 0.0047436 5542 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 86.472 69.696 113410000 0 0 0 4946000 3863900 10376000 6163300 5616000 6179500 11828000 22567000 12271000 10235000 9441000 9926900 2168 3341 1984 18604;18605;18606;18607;18608;18609;18610;18611;18612;18613;18614;18615 14692;14693;14694;14695;14696;14697;14698 14696 7 AGSEVISR Unmodified 817.42938 0.42938104 4363 Q9H2D6 TRIOBP TRIO and F-actin-binding protein yes yes 0 0 0 By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 13.418 13.621 2 0.041222 12169 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.04 13.855 18975000 0 0 0 0 0 2622000 2095200 1509200 1793900 0 3738300 0 0 2800800 4415400 2169 4363 1985 18616;18617;18618;18619;18620;18621;18622 14699 14699 1 AGSFITGIDVTSK Unmodified 1294.6769 0.67688153 2699 Q53F19 C17orf85 Uncharacterized protein C17orf85 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 76.549 72.352 2 0.022603 87176 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 50.284 32.419 43176000 0 43176000 0 0 0 0 0 0 0 0 0 0 0 0 0 2170 2699 1986 18623;18624 14700 14700 1 AGSGAGAAGLGTATSSVTGEPIETSPVIHLVTDAK Unmodified 3221.6416 0.64156524 2846 Q66K89 E4F1 Transcription factor E4F1 yes yes 0 0 0 By MS/MS 10 0 1 1 85.937 86.042 3 0.0019654 99686 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 19.118 13.575 3798800 0 0 0 0 0 0 0 0 0 3798800 0 0 0 0 0 2171 2846 1987 18625 14701 14701 1 AGSGLVLSGSEIPK Unmodified 1313.7191 0.7190807 2989 Q6W2J9 BCOR BCL-6 corepressor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 66.801 66.89 2 0.0018698 76635 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 54.198 37.944 93528000 0 0 0 5957300 6364500 0 0 8527500 7158400 10750000 11728000 10619000 10518000 7684600 14221000 2172 2989 1988 18626;18627;18628;18629;18630;18631;18632;18633;18634;18635;18636 14702;14703;14704;14705;14706;14707;14708;14709;14710;14711 14705 10 AGSGTGVGAMLAR Unmodified 1146.5815 0.58154136 4797 Q9P0U4 CXXC1 CXXC-type zinc finger protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.405 48.566 2 0.0028708 53504 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.548 37.817 101410000 0 0 0 4488300 6318500 4940100 5345200 7777100 4933700 7179900 12849000 15696000 9545000 9209600 13131000 2173 4797 1989 18637;18638;18639;18640;18641;18642;18643;18644;18645;18646;18647;18648 14712;14713;14714;14715;14716;14717;14718 14714 7 AGSISSEEVDGSQGNMMR Unmodified 1853.7884 0.7883756 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 2 1 45.627 45.814 2 1.0492E-14 51365 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 91.858 85.198 34345000 0 0 0 0 2638400 0 2871700 5625200 3098700 0 6287600 7734700 0 6088300 0 2174 3443 1990 18649;18650;18651;18652;18653;18654;18655;18656 14719;14720;14721;14722;14723;14724 14720 6 AGSISSEEVDGSQGNMMR Oxidation (M) 1869.7833 0.78329023 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 35.456 35.208 2 3.5306E-08 38255 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 71.241 62.052 9940400 0 0 0 3050100 2230800 0 0 4659500 0 0 0 0 0 0 0 2175 3443 1990 18657;18658;18659;18660 14725;14726 14725 4979;4980 2 AGSISSEEVDGSQGNMMR 2 Oxidation (M) 1885.7782 0.77820485 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 2 0 By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 26.7 26.813 2 3.7464E-06 28771 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 73.848 57.594 24253000 0 0 0 2330100 2091300 3649500 0 2216500 1701400 2307400 3539600 0 4079000 2338200 0 2176 3443 1990 18661;18662;18663;18664;18665;18666;18667;18668;18669 14727 14727 4979;4980 1 AGSISTLDSLDFAR Unmodified 1451.7256 0.72562264 4807 Q9P260 KIAA1468 LisH domain and HEAT repeat-containing protein KIAA1468 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 80.17 80.238 2 0.0014045 92576 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 58.676 48.756 50704000 0 0 0 2075100 0 5596100 2871200 0 0 5815900 5145100 7483900 4633900 4911400 12171000 2177 4807 1991 18670;18671;18672;18673;18674;18675;18676;18677;18678 14728;14729;14730;14731;14732;14733;14734 14730 7 AGSLQIPYTTEDLIK Unmodified 1647.872 0.87195253 3160 Q86V40 TRABD2A Metalloprotease TIKI1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 83.749 83.682 2 7.5696E-06 97112 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 110.93 85.715 5810200 0 0 0 0 2134100 0 0 0 0 0 0 0 0 3676100 0 2178 3160 1992 18679;18680;18681;18682;18683;18684 14735;14736;14737;14738;14739 14739 5 AGSNMLLIGVHGPTTPCEEVSMK Oxidation (M) 2443.1546 0.15455145 487 O75369 FLNB Filamin-B yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 2 2 1 79.573 74.157 3 1.1053E-08 93336 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.389 49.11 322460000 230340000 83656000 8463400 0 0 0 0 0 0 0 0 0 0 0 0 2179 487 1993 18685;18686;18687;18688;18689 14740;14741;14742;14743;14744 14740 611;612 5 AGSNMLLIGVHGPTTPCEEVSMK 2 Oxidation (M) 2459.1495 0.14946607 487 O75369 FLNB Filamin-B yes yes 0 2 0 By MS/MS By MS/MS 2 0 2 1 1 74.801 69.194 3 1.0242E-13 85721 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 80.412 80.412 95202000 77121000 0 18081000 0 0 0 0 0 0 0 0 0 0 0 0 2180 487 1993 18690;18691 14745;14746 14746 611;612 2 AGSNMLLIGVHGPTTPCEEVSMK Unmodified 2427.1596 0.15963682 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS 2 0 1 1 85.351 77.22 3 0.00026453 100938 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.881 48.78 148130000 148130000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2181 487 1993 18692 14747 14747 1 AGSPSRDVGPSLGLK Unmodified 1439.7732 0.77324153 3521 Q8TEW0 PARD3 Partitioning defective 3 homolog yes yes 0 0 1 By MS/MS 2 0 1 1 54.206 46.143 3 0.021316 63509 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.282 34.749 14278000 14278000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2182 3521 1994 18693 14748 14748 0 AGSQLGPGYQHHAQPK Unmodified 1674.8227 0.82265134 2072 Q02241 KIF23 Kinesin-like protein KIF23 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 2 2 2 2 2 2 1 2 2 2 2 15.899 16.067 3;4 0.0010215 15288 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 31.089 17.988 257540000 0 0 0 7616000 12104000 12148000 18683000 12099000 12676000 19298000 24150000 43667000 34738000 18539000 41825000 2183 2072 1995 18694;18695;18696;18697;18698;18699;18700;18701;18702;18703;18704;18705;18706;18707;18708;18709;18710;18711;18712;18713;18714;18715 14749;14750;14751;14752;14753;14754;14755;14756 14755 6 AGSSAAGASGWTSAGSLNSVPTNSAQQGHNSPDSPVTSAAK Unmodified 3811.7634 0.76336473 3199 Q86XP3 DDX42 ATP-dependent RNA helicase DDX42 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.62 1.7 1 20 1 1 1 2 2 1 2 2 2 1 2 2 2 65.319 65.17 3;4 9.6208E-07 74663 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 27.581 22.866 157680000 0 16438000 0 2968800 5361900 15995000 12073000 7181200 8476800 18237000 13334000 10868000 12742000 10849000 23150000 2184 3199 1996 18716;18717;18718;18719;18720;18721;18722;18723;18724;18725;18726;18727;18728;18729;18730;18731;18732;18733;18734;18735;18736 14757;14758;14759;14760;14761;14762;14763;14764;14765;14766;14767 14763 11 AGSSESIAAFIQR Unmodified 1335.6783 0.67827852 1502 P46379 BAG6 Large proline-rich protein BAG6 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 74.16 74.276 2 8.1709E-13 85547 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 133.23 104.27 514460000 0 0 0 0 27611000 41962000 30153000 60202000 34625000 57348000 45502000 67722000 51721000 40001000 57611000 2185 1502 1997 18737;18738;18739;18740;18741;18742;18743;18744;18745;18746;18747 14768;14769;14770;14771;14772;14773;14774;14775;14776;14777 14769 10 AGSSTGGGGVGETK Acetyl (Protein N-term) 1205.5524 0.5524093 198 O14641 DVL2 Segment polarity protein dishevelled homolog DVL-2 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.43 2.06 1 13 1 1 1 2 1 1 1 1 1 1 1 1 1 15.774 15.481 2 6.62E-06 15002 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 87.789 77.265 48991000 2380400 0 0 0 2930200 1317800 0 4394800 0 6067800 7664500 0 7742200 7450100 9043100 2186 198 1998 18748;18749;18750;18751;18752;18753;18754;18755;18756;18757;18758;18759;18760;18761 14778;14779;14780;14781;14782;14783;14784;14785;14786;14787;14788;14789;14790;14791 14785 14 AGSSTPGDAPPAVAEVQGR Unmodified 1765.8595 0.85949036 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 1 2 2 2 2 2 2 2 48.619 48.777 2;3 1.9039E-17 53972 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 123.02 112.41 673400000 0 0 0 35187000 27486000 67222000 34974000 24342000 34011000 48878000 74494000 103640000 51504000 46792000 124870000 2187 3119 1999 18762;18763;18764;18765;18766;18767;18768;18769;18770;18771;18772;18773;18774;18775;18776;18777;18778;18779;18780;18781;18782;18783;18784 14792;14793;14794;14795;14796;14797;14798;14799;14800;14801;14802;14803;14804;14805;14806;14807;14808 14796 13 AGSVADSDAVVK Acetyl (Protein N-term) 1159.5721 0.57208211 2679 Q3ZCW2 LGALSL Galectin-related protein yes yes 1 0 0 By MS/MS 1 0 1 1 101.99 107.25 2 0.00055286 87012 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 84.213 59.29 4570900 4570900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2188 2679 2000 18785 14809;14810 14809 2 AGSVELLGAMAYCAPK Unmodified 1636.7953 0.79529888 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 85.698 81.044 2 0.00083681 97700 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 87.184 66.185 126620000 10437000 112330000 3849100 0 0 0 0 0 0 0 0 0 0 0 0 2189 3641 2001 18786;18787;18788;18789 14811;14812;14813 14811 3 AGSVSLDSVLADVR Unmodified 1387.7307 0.73070802 664 O95466 FMNL1 Formin-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 84.555 84.653 2 0.00038589 97636 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 87.363 62.508 80320000 0 0 0 2973400 0 0 4342800 6750400 7378200 13914000 10030000 9023600 3523400 8288500 14096000 2190 664 2002 18790;18791;18792;18793;18794;18795;18796;18797;18798;18799;18800;18801 14814;14815;14816;14817;14818;14819;14820;14821;14822;14823;14824;14825 14818 11 AGSYPEGAPAILADK Acetyl (Protein N-term) 1500.746 0.74602373 2923 Q6P1Q9 METTL2B Methyltransferase-like protein 2B yes yes 1 0 0 By MS/MS By MS/MS 1 0 2 1 1 104.16 107.24 2 0.00020778 96625 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 89.403 67.317 20374000 6206200 14168000 0 0 0 0 0 0 0 0 0 0 0 0 0 2191 2923 2003 18802;18803 14826;14827 14827 2 AGTEDEEEEEEGRRETPEDR Unmodified 2361.9793 0.97928374 663 O95456 PSMG1 Proteasome assembly chaperone 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 18.693 18.894 4 0.00050794 18676 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 46.702 37.656 76358000 0 0 0 4290300 4858700 9846300 4762400 0 6581000 7603400 6431800 8624700 5427900 4743600 13188000 2192 663 2004 18804;18805;18806;18807;18808;18809;18810;18811;18812;18813;18814 14828;14829;14830;14831;14832;14833;14834;14835;14836 14832 9 AGTEPSDAIR Unmodified 1015.4934 0.49343786 2557 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 2 1 1 2 1 1 2 1 2 1 1 2 20.37 20.586 2 0.00037533 21112 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 129.42 101.9 1316600000 0 0 0 82992000 64480000 126610000 84955000 80219000 53432000 143980000 134890000 146760000 105150000 107520000 185560000 2193 2557 2005 18815;18816;18817;18818;18819;18820;18821;18822;18823;18824;18825;18826;18827;18828;18829;18830;18831 14837;14838;14839;14840;14841;14842;14843;14844;14845;14846;14847;14848;14849 14843 8 AGTFIAPPVYSNITPYQSHLR Unmodified 2331.2012 0.20116601 2958 Q6PJG2 ELMSAN1 ELM2 and SANT domain-containing protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 81.868 82.07 3 1.2414E-09 94632 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.855 51.085 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2194 2958 2006 18832 14850 14850 1 AGTGVDNVDLEAATR Unmodified 1487.7216 0.72159989 304 O43175 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 53.246 53.372 2 8.34E-21 60470 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 137.59 101.64 494690000 0 0 0 39806000 30929000 55505000 51315000 33479000 0 39898000 46836000 79234000 0 52933000 64751000 2195 304 2007 18833;18834;18835;18836;18837;18838;18839;18840;18841;18842;18843 14851;14852;14853;14854;14855;14856;14857;14858;14859;14860;14861;14862;14863;14864;14865;14866 14855 15 AGTGVDNVDLEAATRK Unmodified 1615.8166 0.81656291 304 O43175 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.11 3.77 8 2 17 2 5 3 1 1 1 1 2 2 1 1 2 2 1 2 47.273 45.772 2;3 1.9969E-37 51708 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 144.27 127.63 7408000000 19801000 389070000 16472000 312720000 260400000 714480000 428080000 465250000 301160000 675210000 629690000 597040000 688730000 689720000 1220200000 2196 304 2008 18844;18845;18846;18847;18848;18849;18850;18851;18852;18853;18854;18855;18856;18857;18858;18859;18860;18861;18862;18863;18864;18865;18866;18867;18868;18869;18870 14867;14868;14869;14870;14871;14872;14873;14874;14875;14876;14877;14878;14879;14880;14881;14882;14883;14884;14885;14886;14887;14888;14889;14890;14891;14892;14893;14894;14895 14890 25 AGTLQVGDR Unmodified 915.47739 0.47739386 2381 Q14160 SCRIB Protein scribble homolog yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.697 21.902 2 0.0036117 22361 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 102.51 43.596 134370000 0 0 0 9856100 4739600 11922000 9040000 10206000 6567300 10972000 12124000 14495000 14128000 12935000 17379000 2197 2381 2009 18871;18872;18873;18874;18875;18876;18877;18878;18879;18880;18881;18882 14896;14897;14898;14899;14900;14901 14899 4 AGTQIENIDEDFRDGLK Unmodified 1919.9225 0.92248455 356 O43707 ACTN4 Alpha-actinin-4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.12 3.89 12 4 16 4 9 3 1 1 2 1 1 1 1 2 2 1 1 2 75.865 74.047 2;3 0 93049 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 306.14 267.26 3740200000 19544000 2743700000 168280000 5834600 7393800 71970000 11723000 23577000 22750000 38162000 76641000 90440000 18727000 50934000 390470000 2198 356 2010 18883;18884;18885;18886;18887;18888;18889;18890;18891;18892;18893;18894;18895;18896;18897;18898;18899;18900;18901;18902;18903;18904;18905;18906;18907;18908;18909;18910;18911;18912;18913;18914 14902;14903;14904;14905;14906;14907;14908;14909;14910;14911;14912;14913;14914;14915;14916;14917;14918;14919;14920;14921;14922;14923;14924;14925;14926;14927;14928;14929 14911 26 AGTQIENIEEDFRDGLK Unmodified 1933.9381 0.93813461 971 P12814 ACTN1 Alpha-actinin-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.29 0.452 5 2 1 4 2 84.467 80.723 2;3 4.2489E-62 102303 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 178.15 167.22 789450000 2785000 765660000 21006000 0 0 0 0 0 0 0 0 0 0 0 0 2199 971 2011 18915;18916;18917;18918;18919;18920;18921 14930;14931;14932;14933;14934;14935 14931 3 AGTRTDSREDEISPPPPNPVVK Unmodified 2361.1925 0.19245182 927 P10644 PRKAR1A cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed yes yes 0 0 2 By MS/MS By MS/MS 2 0 4 2 2 53.612 47.578 3;4 1.0887E-06 59474 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 57.009 53.722 169190000 34524000 0 134660000 0 0 0 0 0 0 0 0 0 0 0 0 2200 927 2012 18922;18923;18924;18925 14936;14937;14938;14939;14940;14941;14942;14943 14940 7 AGTVVLDDVELR Acetyl (Protein N-term) 1327.6983 0.69834526 1183 P25205 MCM3 DNA replication licensing factor MCM3 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 88.154 87.841 2 1.0014E-08 102536 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 129.85 111.07 428210000 0 15089000 0 10301000 22302000 35376000 24208000 20966000 19153000 40768000 48052000 49292000 23138000 33151000 86415000 2201 1183 2013 18926;18927;18928;18929;18930;18931;18932;18933;18934;18935;18936;18937;18938 14944;14945;14946;14947;14948;14949;14950;14951;14952;14953;14954;14955;14956;14957 14954 14 AGTVVLDDVELREAQR Acetyl (Protein N-term) 1811.9377 0.93774068 1183 P25205 MCM3 DNA replication licensing factor MCM3 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 82.243 82.313 2 0.00048048 95456 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 63.408 38.191 27595000 0 0 0 0 993840 3868000 0 0 0 3580400 5587400 3904000 2205200 0 7456200 2202 1183 2014 18939;18940;18941;18942;18943;18944;18945 14958;14959;14960;14961;14962;14963 14963 6 AGTVVLDDVELREAQRDYLDFLDDEEDQGIYQSK Acetyl (Protein N-term) 3985.8705 0.87051514 1183 P25205 MCM3 DNA replication licensing factor MCM3 yes yes 1 0 2 By MS/MS By MS/MS 2.5 0.5 2 2 3 1 98.626 93.65 3;4 0 116961 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 255.02 242.34 99887000 57766000 42121000 0 0 0 0 0 0 0 0 0 0 0 0 0 2203 1183 2015 18946;18947;18948;18949 14964;14965;14966;14967 14964 4 AGVAAPATQVAQVTLQSVQR Unmodified 1994.0909 0.090887278 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 2 2 2 2 2 2 2 2 1 1 2 80.354 80.434 2;3 1.8019E-05 92712 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.4 34.966 178480000 0 0 0 2482800 11541000 19215000 10353000 14760000 10309000 16748000 15815000 25138000 9422600 13737000 28959000 2204 2501 2016 18950;18951;18952;18953;18954;18955;18956;18957;18958;18959;18960;18961;18962;18963;18964;18965;18966;18967;18968;18969;18970 14968;14969;14970;14971;14972;14973;14974;14975;14976;14977;14978;14979;14980 14972 8 AGVACLGK Acetyl (Protein N-term) 816.41637 0.41637351 2562 Q15653 NFKBIB NF-kappa-B inhibitor beta yes yes 1 0 0 By MS/MS 1 0 1 1 103.79 109.05 2 0.023311 89219 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 53.163 35.601 5665100 5665100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2205 2562 2017 18971 14981 14981 1 AGVAPLQVK Unmodified 881.53345 0.53345218 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.65 3.66 1 3 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 46.531 45.684 2 0.0054331 45286 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.741 54.721 3517200000 153780000 2143700000 49000000 54869000 50578000 79007000 79661000 57357000 55852000 99258000 135170000 137700000 86420000 94977000 239880000 2206 1124 2018 18972;18973;18974;18975;18976;18977;18978;18979;18980;18981;18982;18983;18984;18985;18986;18987;18988 14982;14983;14984;14985;14986;14987;14988;14989;14990;14991;14992;14993;14994;14995;14996;14997;14998;14999;15000;15001 14991 9 AGVDPLVPLR Unmodified 1035.6077 0.60767975 4934 Q9UJ70 NAGK N-acetyl-D-glucosamine kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 72.496 72.5 2 0.010798 83398 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 55.37 37.384 58150000 0 0 0 19852000 4168200 0 4205200 8959000 0 5227600 8374400 7363000 0 0 0 2207 4934 2019 18989;18990;18991;18992;18993;18994;18995 15002;15003;15004;15005;15006;15007;15008;15009;15010 15006 8 AGVDYAPNLPPFPSPADVK Unmodified 1953.9836 0.98362824 2854 Q68CZ2 TNS3 Tensin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 2 1 1 1 1 1 1 1 1 87.226 86.352 2;3 4.4327E-18 106605 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 152.16 129.05 202230000 0 155880000 0 0 0 5762800 3552400 0 3577500 7921400 5618100 8395200 5889700 5627200 0 2208 2854 2020 18996;18997;18998;18999;19000;19001;19002;19003;19004;19005 15011;15012;15013;15014;15015;15016;15017 15014 6 AGVEEQEGLLSFQEDR Unmodified 1805.8432 0.84317159 3666 Q92817 EVPL Envoplakin yes yes 0 0 0 By MS/MS 10 0 1 1 75.318 74.797 2 1.6332E-10 86724 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 95.401 71.019 6286900 0 0 0 6286900 0 0 0 0 0 0 0 0 0 0 0 2209 3666 2021 19006 15018 15018 1 AGVEEVAASGSHLNGDLDPDDREEGAASTAEEAAK Acetyl (Protein N-term) 3509.5666 0.56662198 1631 P50579 METAP2 Methionine aminopeptidase 2 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 76.295 74.814 3 0 92027 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 354.65 347.27 522480000 75732000 355490000 0 0 0 6546600 0 7365200 0 0 13619000 26438000 4525300 0 32772000 2210 1631 2022 19007;19008;19009;19010;19011;19012;19013;19014 15019;15020;15021;15022;15023;15024;15025 15020 7 AGVEEVAASGSHLNGDLDPDDREEGAASTAEEAAKK Acetyl (Protein N-term) 3637.6616 0.661585 1631 P50579 METAP2 Methionine aminopeptidase 2 yes yes 1 0 2 By MS/MS 2 0 1 1 76.951 72.113 4 1.7251E-72 90119 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.48 98.189 25095000 0 25095000 0 0 0 0 0 0 0 0 0 0 0 0 0 2211 1631 2023 19015 15026 15026 1 AGVENGKPTHFTVYTK Unmodified 1747.8893 0.88933392 487 O75369 FLNB Filamin-B yes yes 0 0 1 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 36.994 37.098 3 0.00079567 40052 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 53.168 33.957 35685000 0 0 0 2779400 2098400 0 2700300 3622400 0 6931200 0 9725000 4420000 3408000 0 2212 487 2024 19016;19017;19018;19019;19020;19021;19022;19023 15027 15027 1 AGVETTTPSK Unmodified 989.50294 0.50293991 911 P0DOY3;P0DOY2 yes no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.716 11.842 2 0.00090505 10683 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 115.71 71.267 307980000 0 0 0 55094000 9299700 8638400 10679000 67914000 6773500 83122000 13611000 13465000 32313000 7070100 0 2213 911 2025 19024;19025;19026;19027;19028;19029;19030;19031;19032;19033;19034 15028;15029;15030;15031;15032;15033;15034;15035;15036;15037 15032 9 AGVGEPPEPGGRPEPGPR Unmodified 1754.87 0.86999547 2460 Q14997 PSME4 Proteasome activator complex subunit 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 35.103 35.307 3 0.00036139 38900 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 40.085 34.168 90724000 0 0 0 6191000 2765700 9566900 0 0 0 6767700 8256200 10248000 8046100 17803000 21080000 2214 2460 2026 19035;19036;19037;19038;19039;19040;19041;19042;19043 15038;15039;15040;15041;15042;15043;15044;15045;15046;15047;15048 15039 11 AGVLAGHDNR Unmodified 1008.5101 0.51009098 1921 P62873 GNB1 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 10.413 10.55 2 0.0091008 8604 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 58.433 40.398 51232000 0 0 0 2812400 0 4188900 4004100 3686200 0 3588400 0 6950700 10534000 8247200 7220800 2215 1921 2027 19044;19045;19046;19047;19048;19049;19050;19051;19052 15049;15050;15051;15052;15053;15054;15055;15056 15056 7 AGVLAHLEEER Unmodified 1222.6306 0.63060004 1356;1357 P35579;P35580 MYH9;MYH10 Myosin-9;Myosin-10 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 2 2 1 1 2 1 1 1 1 1 2 1 49.176 49.247 2;3 0.00098306 54681 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 62.924 53.97 484440000 0 0 0 29735000 31748000 47729000 31880000 35930000 21192000 27267000 39241000 55205000 47080000 45228000 72206000 2216 1356;1357 2028 19053;19054;19055;19056;19057;19058;19059;19060;19061;19062;19063;19064;19065;19066;19067;19068 15057;15058;15059;15060;15061;15062;15063;15064;15065;15066;15067;15068;15069 15066 12 AGVLAHLEEERDLK Unmodified 1578.8366 0.83657007 1356;1357 P35579;P35580 MYH9;MYH10 Myosin-9;Myosin-10 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 3 2 2 2 2 2 3 3 2 2 56.059 56.332 3;4 8.0731E-12 62560 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.45 69.064 487810000 0 0 0 0 0 88616000 11229000 44093000 38541000 17973000 16802000 46491000 35135000 21314000 167620000 2217 1356;1357 2029 19069;19070;19071;19072;19073;19074;19075;19076;19077;19078;19079;19080;19081;19082;19083;19084;19085;19086;19087;19088;19089;19090;19091 15070;15071;15072;15073;15074;15075;15076;15077;15078;15079;15080;15081;15082;15083 15074 14 AGVLGGPATPASGPGPASAEPAVTEPGLGPDPK Unmodified 2921.4771 0.4770661 4550 Q9NPF5 DMAP1 DNA methyltransferase 1-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.379 78.437 3 7.601E-84 90726 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 106.37 100.15 741280000 0 0 0 40675000 63889000 55984000 64794000 48381000 51599000 85479000 60076000 79716000 52011000 56914000 81759000 2218 4550 2030 19092;19093;19094;19095;19096;19097;19098;19099;19100;19101;19102;19103 15084;15085;15086;15087;15088;15089;15090;15091;15092;15093;15094;15095 15093 12 AGVLVSHEVTK Unmodified 1138.6346 0.63462279 3436 Q8NEZ4 KMT2C Histone-lysine N-methyltransferase 2C yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 33.6 28.809 2 0.0032977 40825 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 102.06 74.325 32655000 28328000 0 4326900 0 0 0 0 0 0 0 0 0 0 0 0 2219 3436 2031 19104;19105 15096;15097 15096 0 AGVMALANLLQIQR Oxidation (M) 1512.8446 0.84463234 5076 Q9Y224 C14orf166 UPF0568 protein C14orf166 yes yes 0 1 0 By MS/MS 10 0 1 1 89.154 89.297 2 0.025419 103378 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.863 36.938 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2220 5076 2032 19106 15098 15098 1 AGVNFSEFTGVWK Unmodified 1440.7038 0.70376498 480 O75340 PDCD6 Programmed cell death protein 6 yes yes 0 0 0 By MS/MS 2 0 1 1 93.186 85.056 2 0.0020934 110117 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.97 89.378 32534000 32534000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2221 480 2033 19107 15099 15099 1 AGVNSDSPNNCSGK Unmodified 1405.5892 0.58920551 5193 Q9Y4C1 KDM3A Lysine-specific demethylase 3A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.3947 7.5229 2 8.5719E-05 4489 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 87.363 84.85 55714000 0 0 0 2676000 3569500 2984800 3589900 4437900 3778600 3991900 8910700 5924600 5015500 4669700 6165000 2222 5193 2034 19108;19109;19110;19111;19112;19113;19114;19115;19116;19117;19118;19119 15100;15101;15102;15103;15104;15105;15106;15107;15108;15109;15110;15111 15107 12 AGVNTVTTLVENK Unmodified 1344.7249 0.72489436 1900 P62424 RPL7A 60S ribosomal protein L7a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.221 62.319 2 0.0012877 71534 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 86.879 68.711 463080000 0 0 0 18003000 22169000 30851000 25366000 27023000 23779000 50106000 48296000 63554000 44739000 43962000 65234000 2223 1900 2035 19120;19121;19122;19123;19124;19125;19126;19127;19128;19129;19130;19131 15112;15113;15114;15115;15116 15116 2 AGVNTVTTLVENKK Unmodified 1472.8199 0.81985737 1900 P62424 RPL7A 60S ribosomal protein L7a yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.104 52.25 3 2.5763E-06 57993 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 70.889 55.727 612080000 0 0 0 28741000 38610000 30743000 43878000 34314000 27812000 56359000 72272000 89054000 49890000 47617000 92791000 2224 1900 2036 19132;19133;19134;19135;19136;19137;19138;19139;19140;19141;19142;19143 15117;15118;15119;15120;15121;15122;15123;15124;15125;15126;15127;15128;15129 15126 13 AGVPGVAAPGAPAAAPPAK Unmodified 1568.8675 0.86747627 1710 P53350 PLK1 Serine/threonine-protein kinase PLK1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 2 2 1 2 1 1 1 1 1 1 2 1 56.851 56.876 2;3 1.5712E-08 64565 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 83.182 73.527 149280000 0 0 0 10335000 12198000 12275000 13839000 0 9935000 11847000 18732000 15089000 13021000 14600000 17406000 2225 1710 2037 19144;19145;19146;19147;19148;19149;19150;19151;19152;19153;19154;19155;19156;19157;19158;19159 15130;15131;15132;15133;15134;15135;15136;15137;15138;15139;15140;15141;15142;15143;15144;15145 15138 16 AGVQADEDEDGDEK Unmodified 1476.5852 0.58522557 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.254 12.403 2 3.3414E-08 11509 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 115.18 115.18 105250000 0 0 0 5661900 5962200 9013900 7237000 5043900 7282000 10118000 7152100 13746000 7837400 7728100 18467000 2226 1201 2038 19160;19161;19162;19163;19164;19165;19166;19167;19168;19169;19170;19171 15146;15147;15148;15149;15150;15151;15152;15153;15154;15155;15156 15146 11 AGVQADEDEDGDEKDEK Unmodified 1848.7497 0.74972472 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.133 11.248 3 5.3519E-25 10093 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 106.38 91.945 96638000 0 0 0 7711600 6403900 4120300 11675000 7153200 3826600 8577700 0 15031000 8067500 8439500 15631000 2227 1201 2039 19172;19173;19174;19175;19176;19177;19178;19179;19180;19181;19182 15157;15158;15159;15160;15161;15162;15163;15164 15159 8 AGVQEFVDGLHEK Unmodified 1427.7045 0.70449327 4955 Q9UK61 FAM208A Protein FAM208A yes yes 0 0 0 By MS/MS 2 0 1 1 73.255 67.711 3 0.01526 85651 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 40.552 19.513 16800000 0 16800000 0 0 0 0 0 0 0 0 0 0 0 0 0 2228 4955 2040 19183 15165 15165 1 AGVQSGTNALLVVK Unmodified 1355.7773 0.77726428 3366 Q8N7H5 PAF1 RNA polymerase II-associated factor 1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 67.363 65.793 2 5.4196E-14 75274 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 115.57 85.83 884110000 11759000 450090000 5984400 12010000 19847000 22419000 19195000 21487000 17912000 35135000 47998000 57633000 45169000 47572000 69900000 2229 3366 2041 19184;19185;19186;19187;19188;19189;19190;19191;19192;19193;19194;19195;19196;19197;19198;19199;19200 15166;15167;15168;15169;15170;15171;15172;15173;15174;15175;15176;15177;15178;15179 15178 13 AGVQSVGEK Unmodified 873.4556 0.45559579 3167 Q86VM9 ZC3H18 Zinc finger CCCH domain-containing protein 18 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 10.463 10.582 2 0.013227 9235 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 60.118 18.466 43360000 0 0 0 0 0 6819800 9599800 6572600 0 8581300 0 11787000 0 0 0 2230 3167 2042 19201;19202;19203;19204;19205 15180;15181;15182;15183 15181 1 AGVRPSSSGSAWEACSEAPSK Unmodified 2119.9593 0.95928076 2189 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 38.61 38.828 3 0.00049839 43117 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 33.37 16.685 190640000 0 0 0 0 13834000 18618000 15919000 11554000 13835000 18555000 0 20837000 23811000 17732000 35947000 2231 2189 2043 19206;19207;19208;19209;19210;19211;19212;19213;19214;19215 15184;15185;15186;15187;15188 15184 4 AGVSFSGHR Acetyl (Protein N-term) 958.46208 0.46207815 2621 Q16643 DBN1 Drebrin yes yes 1 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 35.445 35.685 2 0.0016874 39534 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 79.713 61.31 263730000 0 0 0 0 18897000 16616000 16376000 12799000 14791000 15779000 30458000 43003000 34483000 23895000 36635000 2232 2621 2044 19216;19217;19218;19219;19220;19221;19222;19223;19224;19225;19226 15189;15190;15191;15192;15193;15194;15195;15196;15197;15198 15189 10 AGVSTNISTK Unmodified 976.51892 0.51892433 1707 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.274 21.478 2 0.00028558 22485 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 139.98 79.007 1282300000 0 0 0 69605000 69733000 93417000 118750000 90200000 91631000 106790000 117370000 167240000 104950000 106460000 146180000 2233 1707 2045 19227;19228;19229;19230;19231;19232;19233;19234;19235;19236;19237;19238 15199;15200;15201;15202;15203;15204;15205;15206;15207;15208;15209;15210;15211;15212 15210 13 AGVSVYGIVK Unmodified 991.57023 0.57023162 3796 Q96DG6 CMBL Carboxymethylenebutenolidase homolog yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 62.46 62.713 2 0.0055193 70523 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.625 43.806 80882000 0 0 0 0 0 2862900 3116400 6112000 0 7006000 12067000 11718000 0 9556900 28442000 2234 3796 2046 19239;19240;19241;19242;19243;19244;19245;19246 15213;15214;15215;15216 15213 4 AGVVANDAGDR Unmodified 1043.4996 0.49958587 2175 Q0VDF9 HSPA14 Heat shock 70 kDa protein 14 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 12.95 13.249 2 0.012787 11882 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.198 21.461 10244000 0 0 0 0 0 1759200 0 0 0 0 2462700 1348000 0 2023000 2651600 2235 2175 2047 19247;19248;19249;19250;19251 15217;15218;15219 15217 3 AGVVGPELHEQLLSAEK Unmodified 1775.9418 0.94176342 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 69.048 68.315 3 1.1944E-06 77903 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 80.638 62.5 374360000 0 111820000 40231000 11021000 13874000 15778000 15053000 15119000 15764000 26093000 19310000 28757000 17731000 19443000 24369000 2236 2501 2048 19252;19253;19254;19255;19256;19257;19258;19259;19260;19261;19262;19263;19264;19265;19266 15220;15221;15222;15223;15224;15225;15226;15227;15228;15229;15230;15231;15232;15233;15234;15235;15236;15237;15238;15239;15240;15241 15223 22 AGVVNGTGAPGQSPGAGR Unmodified 1551.7754 0.7753668 2272 Q13330 MTA1 Metastasis-associated protein MTA1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.021 28.216 2 8.7076E-15 30312 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 92.925 75.899 70904000 0 0 0 4022000 3631500 3954100 6138400 4110600 3519000 6274800 9505200 9376500 8085800 4301900 7983700 2237 2272 2049 19267;19268;19269;19270;19271;19272;19273;19274;19275;19276;19277;19278 15242;15243;15244;15245;15246;15247;15248;15249;15250;15251;15252;15253 15248 12 AGVYPEK Unmodified 762.3912 0.39120462 1630 P50570 DNM2 Dynamin-2 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 14.288 14.534 2 0.023433 13032 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.359 85.359 91578000 0 0 0 0 0 0 386490 9033600 550800 0 24234000 0 13071000 11424000 32877000 2238 1630 2050 19279;19280;19281;19282;19283;19284;19285 15254;15255;15256;15257 15254 4 AGWNAYIDNLMADGTCQDAAIVGYK Acetyl (Protein N-term);Oxidation (M) 2774.2316 0.23161579 846 P07737;CON__P02584 PFN1 Profilin-1 yes no 1 1 0 By MS/MS By MS/MS 1.91 0.514 2 8 1 3 8 98.856 96.182 2;3 7.2093E-79 90577 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 138.82 133.12 2357000000 188320000 2168700000 0 0 0 0 0 0 0 0 0 0 0 0 0 2239 846 2051 19286;19287;19288;19289;19290;19291;19292;19293;19294;19295;19296 15258;15259;15260;15261;15262;15263;15264;15265;15266;15267;15268 15266 1048 10 AGWNAYIDNLMADGTCQDAAIVGYK Acetyl (Protein N-term) 2758.2367 0.23670117 846 P07737;CON__P02584 PFN1 Profilin-1 yes no 1 0 0 By MS/MS By MS/MS By MS/MS 2 0.577 1 4 1 2 3 1 100.77 97.744 2;3 1.3299E-92 116816 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145.73 140.28 4833300000 519330000 4312400000 1626400 0 0 0 0 0 0 0 0 0 0 0 0 2240 846 2051 19297;19298;19299;19300;19301;19302 15269;15270;15271;15272;15273;15274;15275 15269 5 AGWSLEDVDIFEINEAFAAVSAAIVK Unmodified 2764.396 0.39596223 4207 Q9BWD1 ACAT2 Acetyl-CoA acetyltransferase, cytosolic yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 106.25 99.808 3 1.5677E-12 125756 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.865 50.932 8669500 6750100 1919500 0 0 0 0 0 0 0 0 0 0 0 0 0 2241 4207 2052 19303;19304 15276;15277 15277 2 AGYAGEDCPK Unmodified 1066.439 0.43895945 716 O96019;O94805 ACTL6A;ACTL6B Actin-like protein 6A;Actin-like protein 6B yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 13.557 13.749 2 0.0019707 12950 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 87.308 83.373 399760000 0 0 0 17201000 0 28917000 22335000 21715000 23088000 36575000 37395000 52968000 43066000 38210000 78286000 2242 716 2053 19305;19306;19307;19308;19309;19310;19311;19312;19313;19314;19315 15278;15279;15280;15281;15282;15283;15284;15285 15279 5 AGYEYVSPEQLAGFDK Acetyl (Protein N-term) 1814.8363 0.8362953 4289 Q9C0D9 EPT1 Ethanolaminephosphotransferase 1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 88.979 89.124 2 0.00032277 103254 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 55.452 51.92 11561000 0 0 0 0 0 0 0 3023300 0 2490700 1851800 2806000 1388800 0 0 2243 4289 2054 19316;19317;19318;19319;19320;19321 15286;15287;15288;15289;15290 15289 5 AGYGGSHISGYATLR Unmodified 1508.7372 0.73719038 3025 Q70E73 RAPH1 Ras-associated and pleckstrin homology domains-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 46.981 47.276 3 0.0095593 52161 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.329 23.889 22825000 0 0 0 0 0 5522500 3395800 0 0 0 0 0 3490000 0 10416000 2244 3025 2055 19322;19323;19324;19325 15291 15291 1 AGYPQYVSEILEK Unmodified 1495.7559 0.75586013 1464 P42704 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.12 3.89 3 1 4 1 2 1 1 1 1 1 84.64 82.387 2 0.0021206 98650 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 84.658 72.422 155350000 5062500 126200000 1498600 0 0 0 0 2950700 0 5055000 0 0 0 5886000 8694000 2245 1464 2056 19326;19327;19328;19329;19330;19331;19332;19333 15292;15293;15294;15295;15296;15297 15294 6 AGYQDMPEYENFK Unmodified 1590.6661 0.66605885 2537 Q15437 SEC23B Protein transport protein Sec23B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 64.969 63.87 2 7.2554E-25 80191 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 176.48 172.99 184940000 0 144580000 0 2716200 0 4219700 0 3225500 0 6538300 5807600 0 0 3901100 13953000 2246 2537 2057 19334;19335;19336;19337;19338;19339;19340;19341;19342;19343 15298;15299;15300;15301;15302;15303;15304;15305 15300 8 AGYQDMPEYENFK Oxidation (M) 1606.661 0.66097347 2537 Q15437 SEC23B Protein transport protein Sec23B yes yes 0 1 0 By MS/MS 2 0 1 1 54.358 48.552 2 3.2201E-08 62818 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.47 98.582 34673000 0 34673000 0 0 0 0 0 0 0 0 0 0 0 0 0 2247 2537 2057 19344 15306 15306 4174 1 AGYSLEK Unmodified 766.38612 0.38611924 5031 Q9UNF1 MAGED2 Melanoma-associated antigen D2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 21.469 21.662 2 0.035807 22162 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 70.67 45.051 901510000 0 0 0 62937000 49830000 81324000 89485000 70456000 63132000 110610000 135820000 124680000 0 9232500 104010000 2248 5031 2058 19345;19346;19347;19348;19349;19350;19351;19352;19353;19354;19355 15307 15307 1 AGYSQGATQYTQAQQTR Unmodified 1857.8606 0.86055299 3913 Q96KR1 ZFR Zinc finger RNA-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 31.849 32.223 2 3.1303E-60 34252 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 200.44 191.93 77417000 0 0 0 0 0 0 0 5846000 6156600 9368400 10990000 9707200 9082200 7973400 18293000 2249 3913 2059 19356;19357;19358;19359;19360;19361;19362;19363 15308;15309;15310;15311;15312;15313;15314;15315 15309 8 AHAAIRENPVYEK Unmodified 1496.7736 0.77357588 1508 P46777 RPL5 60S ribosomal protein L5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.54 3 3 2 21 3 1 1 2 2 1 2 1 1 2 2 2 2 2 2 24.514 23.798 2;3 2.0637E-05 23660 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 89.629 77.653 3457400000 2753200000 43858000 33017000 30283000 25921000 28325000 34401000 31658000 30475000 52564000 60663000 90737000 77248000 57572000 107560000 2250 1508 2060 19364;19365;19366;19367;19368;19369;19370;19371;19372;19373;19374;19375;19376;19377;19378;19379;19380;19381;19382;19383;19384;19385;19386;19387;19388;19389 15316;15317;15318;15319;15320;15321;15322;15323;15324;15325;15326;15327;15328;15329;15330;15331;15332;15333;15334 15333 14 AHAALQGK Unmodified 794.43989 0.43988615 4179 Q9BV73 CEP250 Centrosome-associated protein CEP250 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 5.6365 2.3276 2 0.010149 4274 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 132.94 93.723 99457000 77910000 21547000 0 0 0 0 0 0 0 0 0 0 0 0 0 2251 4179 2061 19390;19391 15335;15336 15335 2 AHAAQVTCVAASPHK Unmodified 1546.7674 0.76744465 4092 Q9BQA1 WDR77 Methylosome protein 50 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 17.962 18.12 3 0.0030082 18784 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 43.05 25.848 55817000 0 0 0 3876600 2263300 3008100 4458400 2444500 2285700 2433100 0 9418100 8322600 5856300 11450000 2252 4092 2062 19392;19393;19394;19395;19396;19397;19398;19399;19400;19401;19402 15337;15338 15337 1 AHAAVWNAQEAQADFAK Unmodified 1826.87 0.86999547 123 O00170 AIP AH receptor-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.68 3.89 7 1 11 3 3 2 1 1 1 1 1 1 1 1 1 1 1 62.496 59.876 2;3 6.1646E-72 77785 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 212.17 191.11 645040000 358630000 136160000 67969000 0 2206000 11262000 6903300 7999400 3775100 10255000 8865600 10947000 7378800 0 12685000 2253 123 2063 19403;19404;19405;19406;19407;19408;19409;19410;19411;19412;19413;19414;19415;19416;19417;19418;19419;19420;19421 15339;15340;15341;15342;15343;15344;15345;15346;15347;15348;15349;15350;15351;15352;15353;15354 15344 15 AHAFAVQQK Unmodified 998.52976 0.52976379 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 15.882 15.217 2 2.3493E-07 13700 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 157.99 138.35 119170000 45086000 11879000 0 5540100 3560800 5159400 6142000 4496700 4117200 0 0 10122000 8189600 0 14880000 2254 2501 2064 19422;19423;19424;19425;19426;19427;19428;19429;19430;19431;19432 15355;15356;15357;15358;15359;15360;15361;15362 15355 8 AHAGGGSGGSGAGGPAGR Acetyl (Protein N-term) 1421.6396 0.6396016 473 O75182 SIN3B Paired amphipathic helix protein Sin3b yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 9.215 9.3391 2 7.3785E-38 6375 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 127.17 124.2 52383000 0 0 0 3562700 4207400 3144100 4880800 5143700 2493900 3070200 9210400 6657300 4414200 0 5597900 2255 473 2065 19433;19434;19435;19436;19437;19438;19439;19440;19441;19442;19443 15363;15364;15365;15366;15367;15368;15369;15370;15371;15372 15367 9 AHAPARCPSARGSGDGEMGK Acetyl (Protein N-term) 2052.9218 0.92178981 411 O60547 GMDS GDP-mannose 4,6 dehydratase yes yes 1 0 2 By MS/MS 2 0 2 2 23.965 18.989 3;4 6.886E-08 27057 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.693 48.935 52083000 52083000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2256 411 2066 19444;19445 15373;15374 15374 2 AHASPFSGALTPSAPPGPEMNR Oxidation (M) 2207.043 0.042950807 242 O15027 SEC16A Protein transport protein Sec16A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 64.158 64.305 3 3.4801E-08 73374 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 58.073 41.051 114600000 0 0 0 7822100 0 16154000 0 7647900 8025300 8954900 12272000 17446000 11956000 8881100 15436000 2257 242 2067 19446;19447;19448;19449;19450;19451;19452;19453;19454;19455 15375;15376;15377;15378;15379;15380;15381;15382;15383;15384;15385;15386;15387;15388 15375 329 14 AHATTSNTVSK Unmodified 1115.5571 0.55710075 2911 Q6NZI2 PTRF Polymerase I and transcript release factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 4.1206 1.1971 2 2.192E-68 5118 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 221.5 182.72 1073000000 586810000 480520000 5665300 0 0 0 0 0 0 0 0 0 0 0 0 2258 2911 2068 19456;19457;19458 15389;15390;15391;15392 15390 4 AHCVTLVQLSISCDHLIDK Acetyl (Protein N-term) 2250.1137 0.11367291 4064 Q99829 CPNE1 Copine-1 yes yes 1 0 0 By MS/MS 2 0 1 1 91.38 83.249 3 4.3319E-20 108090 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 108.49 99.84 10031000 10031000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2259 4064 2069 19459 15393 15393 0 AHDEAVRSEK Unmodified 1140.5523 0.55234972 167 O00541 PES1 Pescadillo homolog yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 17.116 17.261 3 0.04594 16647 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 37.696 19.877 48929000 0 0 0 0 4157800 11937000 0 0 3996000 7339700 0 18049000 0 3450000 0 2260 167 2070 19460;19461;19462;19463;19464;19465 15394 15394 0 AHDGAEVCSAIFSK Unmodified 1490.6824 0.68237762 2111 Q05048 CSTF1 Cleavage stimulation factor subunit 1 yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 2 2 3 1 56.856 52.003 2;3 0.00071257 64107 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 58.071 48.228 80738000 0 57106000 23632000 0 0 0 0 0 0 0 0 0 0 0 0 2261 2111 2071 19466;19467;19468;19469 15395;15396;15397;15398;15399 15397 4 AHDPSVRPSVDEILK Unmodified 1661.8737 0.87368386 3384 Q8NB16 MLKL Mixed lineage kinase domain-like protein yes yes 0 0 1 By matching By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 2 56.223 56.608 3;4 0.014818 64041 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 25.866 19.568 107860000 0 0 0 0 0 5772900 0 0 0 0 0 34951000 4086200 4660100 58392000 2262 3384 2072 19470;19471;19472;19473;19474;19475 15400;15401;15402;15403 15403 4 AHEAALEAR Unmodified 966.48829 0.4882929 3217 Q8IUD2 ERC1 ELKS/Rab6-interacting/CAST family member 1 yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 10.649 10.715 2 0.045277 8994 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 43.246 9.4497 11476000 0 0 0 383970 461160 1055500 2062500 814860 1471000 978670 0 0 1682000 2566100 0 2263 3217 2073 19476;19477;19478;19479;19480;19481;19482;19483;19484 15404 15404 1 AHEACGPMEIDSALNTVQTLK Unmodified 2284.0828 0.082766711 5201 Q9Y4G6 TLN2 Talin-2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 85.79 81.769 3 4.5911E-14 101957 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.409 90.809 41156000 0 41156000 0 0 0 0 0 0 0 0 0 0 0 0 0 2264 5201 2074 19485;19486 15405;15406;15407 15406 3 AHEACGPMEIDSALNTVQTLK Oxidation (M) 2300.0777 0.077681334 5201 Q9Y4G6 TLN2 Talin-2 yes yes 0 1 0 By MS/MS 3 0 1 1 81.087 77.788 3 0.00038698 93255 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 49.973 46.021 6333800 0 6333800 0 0 0 0 0 0 0 0 0 0 0 0 0 2265 5201 2074 19487 15408 15408 6596 1 AHEAERIASAVQK Unmodified 1408.7423 0.74227576 933 P11047 LAMC1 Laminin subunit gamma-1 yes yes 0 0 1 By MS/MS 2 0 2 2 33.934 27.703 2;3 0.021814 38944 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.028 38.606 40854000 40854000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2266 933 2075 19488;19489 15409;15410 15409 1 AHEILPNLVCCSAK Unmodified 1610.7909 0.79088221 1641 P50990 CCT8 T-complex protein 1 subunit theta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 2 2 2 73.468 68.086 2;3 2.3738E-05 83362 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 83.729 76.848 1046500000 723480000 237640000 85394000 0 0 0 0 0 0 0 0 0 0 0 0 2267 1641 2076 19490;19491;19492;19493;19494;19495 15411;15412;15413;15414;15415;15416;15417;15418 15416 6 AHELPESMCLK Unmodified 1313.6108 0.61079258 4869 Q9UDY8 MALT1 Mucosa-associated lymphoid tissue lymphoma translocation protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 55.114 49.309 3 0.033335 63683 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 37.995 31.326 10161000 0 10161000 0 0 0 0 0 0 0 0 0 0 0 0 0 2268 4869 2077 19496 15419 15419 1 AHEPTYFTVDCAEAGQGDVSIGIK Unmodified 2564.1853 0.18531753 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 3 2 1 81.641 76.546 2;3 4.0673E-47 97478 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.156 76.705 304310000 243110000 34786000 26414000 0 0 0 0 0 0 0 0 0 0 0 0 2269 1124 2078 19497;19498;19499;19500;19501;19502 15420;15421;15422;15423;15424;15425;15426;15427;15428;15429 15424 9 AHEQALAELTK Unmodified 1209.6354 0.63535107 2540 Q15477 SKIV2L Helicase SKI2W yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 43.033 38.589 3 0.02038 48955 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 58.172 28.405 164410000 0 71457000 92950000 0 0 0 0 0 0 0 0 0 0 0 0 2270 2540 2079 19503;19504 15430 15430 0 AHESVVK Unmodified 768.413 0.41300269 977 P13073 COX4I1 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 0.93487 -1.2177 2 0.012413 733 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 124.37 39.067 10321000 0 0 10321000 0 0 0 0 0 0 0 0 0 0 0 0 2271 977 2080 19505 15431 15431 1 AHEVGAQGGPPVAQVEQDLPISR Unmodified 2354.1979 0.19787154 2427 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.625 76.683 3 1.1317E-20 88547 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 88.79 84.265 129420000 0 0 0 2695100 5979700 10046000 6109200 7880600 8567000 15953000 13542000 14899000 9565200 12684000 21500000 2272 2427 2081 19506;19507;19508;19509;19510;19511;19512;19513;19514;19515;19516;19517 15432;15433;15434;15435;15436;15437;15438;15439;15440;15441;15442 15437 11 AHFGLPSVEAEDK Unmodified 1398.6779 0.67794416 4232 Q9BXS5 AP1M1 AP-1 complex subunit mu-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.6 3.56 5 2 3 3 2 2 1 1 1 63.156 59.199 2;3 7.1753E-09 80172 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.31 98.851 272460000 128830000 45686000 60754000 0 0 13585000 6448000 0 0 17155000 0 0 0 0 0 2273 4232 2082 19518;19519;19520;19521;19522;19523;19524;19525;19526;19527 15443;15444;15445;15446;15447;15448;15449;15450;15451;15452 15448 8 AHFNLDESGVLSLDRVESVFETLVEDSAEEESTLTK Unmodified 3994.9171 0.91713098 5206 Q9Y4L1 HYOU1 Hypoxia up-regulated protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 103.57 95.437 4 1.9893E-242 122688 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 184.76 180.4 17784000 17784000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2274 5206 2083 19528 15453 15453 1 AHFQNFPNGVTDFIK Unmodified 1733.8526 0.85255449 3692 Q92973 TNPO1 Transportin-1 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 86.845 78.715 2;3 0.0022137 102594 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.147 45.042 5873700 5873700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2275 3692 2084 19529;19530 15454;15455 15455 2 AHGAPEPEGEDEK Unmodified 1364.5844 0.58443771 2562 Q15653 NFKBIB NF-kappa-B inhibitor beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 8.2487 8.449 3 0.00046782 5534 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 56.951 40.009 35423000 0 0 0 0 0 1699600 0 1345600 1742200 3446700 8939200 4892100 3285500 2835400 7236600 2276 2562 2085 19531;19532;19533;19534;19535;19536;19537;19538;19539 15456;15457;15458;15459;15460;15461;15462;15463 15461 8 AHGGYSVFAGVGER Unmodified 1405.6739 0.67386184 823 P06576 ATP5B ATP synthase subunit beta, mitochondrial yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 52.184 52.468 3 0.00078329 58163 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.56 31.135 18084000 0 0 0 0 0 2553900 0 0 1870200 0 0 0 3175600 2754700 7729900 2277 823 2086 19540;19541;19542;19543;19544 15464;15465 15464 2 AHGPGLEGGLVGK Unmodified 1190.6408 0.6407708 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.07 3.94 6 1 7 2 3 2 1 1 1 1 1 2 41.989 39.473 2;3 7.4658E-07 50543 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 106.62 89.388 648750000 320500000 122890000 131320000 0 0 12122000 0 0 0 5656000 12465000 9735500 0 9377300 24683000 2278 487 2087 19545;19546;19547;19548;19549;19550;19551;19552;19553;19554;19555;19556;19557;19558 15466;15467;15468;15469;15470;15471;15472;15473;15474;15475;15476;15477;15478;15479;15480;15481;15482;15483 15481 17 AHGPGLEGGLVGKPAEFTIDTK Unmodified 2193.143 0.14298243 487 O75369 FLNB Filamin-B yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS 3.43 2.72 4 2 1 4 1 1 1 77.824 73.394 3;4 2.1643E-40 94512 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.234 81.3 537620000 480040000 28250000 6854400 0 0 0 0 0 0 0 0 0 0 0 22473000 2279 487 2088 19559;19560;19561;19562;19563;19564;19565 15484;15485;15486;15487;15488;15489 15487 4 AHGSLKP Unmodified 708.39187 0.39187332 4167 Q9BUP3 HTATIP2 Oxidoreductase HTATIP2 yes yes 0 0 1 By MS/MS By matching 2 0 2 1 1 7.8887 4.9557 1 0.0090581 8714 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.263 37.652 9473800 7332800 0 2141000 0 0 0 0 0 0 0 0 0 0 0 0 2280 4167 2089 19566;19567 15490 15490 0 AHIANPSGASTECFVTDNADGTYQVEYTPFEK Unmodified 3518.5572 0.55724327 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 2 2 82.711 78.491 3;4 1.3757E-176 98362 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 171.93 170.08 137700000 21207000 79183000 37306000 0 0 0 0 0 0 0 0 0 0 0 0 2281 487 2090 19568;19569;19570;19571;19572 15491;15492;15493;15494;15495;15496;15497 15491 7 AHIAQLCEK Unmodified 1068.5386 0.53861391 2040;1723 P53675;Q00610 CLTCL1;CLTC Clathrin heavy chain 2;Clathrin heavy chain 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.391 20.598 2 3.9009E-20 19913 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 173.73 149.53 279540000 0 0 0 11777000 6977100 16437000 10663000 7608100 0 23167000 44858000 57616000 30982000 24911000 44541000 2282 1723;2040 2091 19573;19574;19575;19576;19577;19578;19579;19580;19581;19582;19583;19584 15498;15499;15500;15501;15502;15503;15504;15505;15506;15507;15508;15509;15510;15511;15512;15513;15514 15504 17 AHIRQDLIHASTEK Unmodified 1617.8587 0.8587025 2833 Q5VZK9 LRRC16A Leucine-rich repeat-containing protein 16A yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 32.975 33.039 3 0.014742 36275 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 34.92 26.744 10827000 0 0 0 0 0 8726500 0 0 2100200 0 0 0 0 0 0 2283 2833 2092 19585;19586 15515 15515 1 AHLFAAERPR Unmodified 1166.6309 0.63087481 255 O15119 TBX3 T-box transcription factor TBX3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 27.451 27.635 3 0.00061335 28878 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 100.48 67.953 337350000 0 0 0 19638000 12178000 40331000 22679000 30840000 46427000 20303000 26351000 43471000 0 38251000 36887000 2284 255 2093 19587;19588;19589;19590;19591;19592;19593;19594;19595;19596;19597 15516;15517;15518;15519;15520;15521;15522;15523;15524;15525 15523 9 AHLGTALK Unmodified 809.47594 0.4759373 1884 P62266 RPS23 40S ribosomal protein S23 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.89 3.41 3 2 13 2 2 1 1 1 1 1 1 1 2 1 1 1 1 1 17.367 16.384 2 0.0042848 15317 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 111.65 26.383 3462600000 1458800000 275460000 399400000 62257000 47804000 49066000 72136000 56685000 44892000 101990000 161380000 213130000 160940000 141550000 217080000 2285 1884 2094 19598;19599;19600;19601;19602;19603;19604;19605;19606;19607;19608;19609;19610;19611;19612;19613;19614;19615 15526;15527;15528;15529;15530;15531;15532;15533;15534;15535;15536;15537;15538;15539;15540;15541;15542;15543;15544;15545 15534 19 AHLMEIQVNGGTVAEK Oxidation (M) 1711.8563 0.85631924 1402 P39023 RPL3 60S ribosomal protein L3 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 47.548 45.972 2;3 3.0136E-40 63188 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 141.73 122.76 103810000 11271000 0 1698700 13016000 0 0 0 12673000 0 24553000 22882000 0 0 0 17713000 2286 1402 2095 19616;19617;19618;19619;19620;19621;19622 15546;15547;15548;15549 15548 2187 2 AHLTFPK Unmodified 812.45447 0.45447358 1880 P62253 UBE2G1 Ubiquitin-conjugating enzyme E2 G1;Ubiquitin-conjugating enzyme E2 G1, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 42.294 37.157 2 0.012128 46172 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 124.89 73.851 273680000 179740000 27405000 66535000 0 0 0 0 0 0 0 0 0 0 0 0 2287 1880 2096 19623;19624;19625;19626;19627 15550;15551;15552;15553 15553 4 AHLTNQYMQR Oxidation (M) 1276.5983 0.59825406 2268 Q13310 PABPC4 Polyadenylate-binding protein 4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 13.856 13.929 3 0.0055766 13415 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 47.706 36.605 53773000 0 0 0 6593900 8013800 7292000 6887800 0 6005500 0 10875000 0 8105800 0 0 2288 2268 2097 19628;19629;19630;19631;19632;19633;19634 15554;15555;15556;15557;15558;15559;15560 15559 3698 5 AHLTNQYMQR Unmodified 1260.6033 0.60333943 2268 Q13310 PABPC4 Polyadenylate-binding protein 4 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching 10 0 14 2 1 1 1 1 1 1 1 2 1 1 1 24.631 24.84 2;3 0.005878 26894 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 43.149 30.533 78691000 0 0 0 17405000 6146900 4190400 3853900 3771600 4178800 4674600 4351600 7809200 4810400 4641300 12857000 2289 2268 2097 19635;19636;19637;19638;19639;19640;19641;19642;19643;19644;19645;19646;19647;19648 15561;15562;15563;15564;15565 15565 5 AHNAGAAAAAGTHSAK Acetyl (Protein N-term) 1446.6964 0.6963882 3444 Q8NFD5 ARID1B AT-rich interactive domain-containing protein 1B yes yes 1 0 0 By MS/MS 2 0 1 1 16.362 12.186 3 0.0013463 17875 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.768 41.38 11239000 11239000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2290 3444 2098 19649 15566;15567 15566 2 AHNLLCQQK Unmodified 1110.5604 0.56041199 3725 Q969T7 NT5C3B 7-methylguanosine phosphate-specific 5'-nucleotidase yes yes 0 0 0 By MS/MS 2 0 1 1 23.491 18.515 2 0.002563 26457 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 117.16 98.384 7421700 7421700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2291 3725 2099 19650 15568 15568 1 AHNNELEPTPGNTLR Unmodified 1661.8121 0.81214624 1179 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 37.483 37.652 3 0.0019856 41610 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 45.084 34.297 109910000 0 0 0 4481500 4294300 7894500 6213900 9615500 4068300 10949000 15341000 14699000 16181000 0 16171000 2292 1179 2100 19651;19652;19653;19654;19655;19656;19657;19658;19659;19660;19661 15569;15570;15571;15572;15573;15574 15573 6 AHPEPGTWDSFLEK Unmodified 1612.7522 0.75217174 907 P0DMM9;P0DMN0 SULT1A3;SULT1A4 Sulfotransferase 1A3;Sulfotransferase 1A4 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.09 3.73 5 2 4 2 3 2 1 1 1 1 76.577 74.094 2;3 1.0171E-15 93500 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.944 75.152 142510000 51425000 22467000 20976000 0 0 9486100 0 0 0 12253000 0 0 0 9026000 16880000 2293 907 2101 19662;19663;19664;19665;19666;19667;19668;19669;19670;19671;19672 15575;15576;15577;15578;15579;15580;15581 15576 4 AHPNMEAGPPESGESTDALK Unmodified 2036.9109 0.91093358 1584 P49662 CASP4 Caspase-4;Caspase-4 subunit 1;Caspase-4 subunit 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 42.146 41.353 3 3.3902E-09 45178 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.229 73.441 88180000 0 40067000 0 3479800 0 0 0 0 3918700 6344100 8251900 5108200 6028700 4502600 10479000 2294 1584 2102 19673;19674;19675;19676;19677;19678;19679;19680;19681;19682 15582;15583;15584;15585;15586;15587;15588;15589;15590;15591 15585 10 AHPNMEAGPPESGESTDALK Oxidation (M) 2052.9058 0.9058482 1584 P49662 CASP4 Caspase-4;Caspase-4 subunit 1;Caspase-4 subunit 2 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 35.415 30.72 3 3.4035E-06 38477 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 57.482 53.24 28719000 0 28719000 0 0 0 0 0 0 0 0 0 0 0 0 0 2295 1584 2102 19683;19684 15592 15592 2550 0 AHPPELK Unmodified 790.43374 0.43373813 38 P62308;A8MWD9 SNRPG;SNRPGP15 Small nuclear ribonucleoprotein G;Putative small nuclear ribonucleoprotein G-like protein 15 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.12 2.32 1 7 1 1 1 1 1 1 1 1 13.317 13.049 2 0.031266 11896 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.975 58.339 371630000 0 63186000 0 26591000 0 34604000 0 0 35170000 50558000 50359000 50831000 0 0 60328000 2296 38 2103 19685;19686;19687;19688;19689;19690;19691;19692 15593;15594 15594 2 AHQDIHTQLQDVK Unmodified 1531.7743 0.77430417 158 O00461 GOLIM4 Golgi integral membrane protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 29.474 28.876 3 6.5602E-07 31128 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 93.228 77.288 165790000 23388000 0 15985000 0 7937200 8131200 12322000 0 10631000 12030000 19188000 10599000 15796000 16579000 13199000 2297 158 2104 19693;19694;19695;19696;19697;19698;19699;19700;19701;19702;19703;19704;19705 15595;15596;15597;15598;15599;15600;15601;15602 15602 8 AHQDNPHEGEDQVSDQVK Unmodified 2031.8882 0.8882243 4891 Q9UH92 MLX Max-like protein X yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 17.429 17.633 3 1.6195E-11 17319 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 89.913 86.525 68317000 0 0 0 4164100 3426200 4457300 0 6210400 4517900 6983900 6104000 9819000 7141800 5412800 10080000 2298 4891 2105 19706;19707;19708;19709;19710;19711;19712;19713;19714;19715;19716 15603;15604;15605;15606;15607;15608;15609 15608 7 AHQITDESLESTRR Unmodified 1641.8071 0.80706086 122 O00161 SNAP23 Synaptosomal-associated protein 23 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 24.999 25.33 3 1.0888E-05 26593 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 69.602 58.283 51082000 0 0 0 0 0 0 4550900 2654200 1648500 3693900 5136900 7747100 4728800 5612800 15308000 2299 122 2106 19717;19718;19719;19720;19721;19722;19723;19724;19725 15610;15611;15612;15613;15614;15615;15616;15617;15618;15619;15620 15613 11 AHQLRPNDSR Unmodified 1192.6061 0.60611663 4943 Q9UJX2 CDC23 Cell division cycle protein 23 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.1497 6.2671 3 0.0062769 4088 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 49.35 42.377 76894000 0 0 0 3987000 4794400 5648700 7227400 4820700 5738000 5877100 5720300 9172700 5889100 5687400 12331000 2300 4943 2107 19726;19727;19728;19729;19730;19731;19732;19733;19734;19735;19736;19737 15621;15622;15623;15624;15625;15626;15627;15628 15621 7 AHQLVHEGYK Unmodified 1180.5989 0.59890598 176 O00743 PPP6C Serine/threonine-protein phosphatase 6 catalytic subunit;Serine/threonine-protein phosphatase 6 catalytic subunit, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 12.495 12.946 3 0.027685 11464 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.352 29.681 16041000 0 0 0 0 0 0 0 0 0 0 4801600 0 0 0 11240000 2301 176 2108 19738;19739 15629 15629 0 AHQRQLTPPEGSSK Unmodified 1534.7852 0.7852032 4033 Q99613;B5ME19 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 0 0 1 By MS/MS By MS/MS 2 0 4 3 1 16.857 13.114 2;3;4 0.00030242 18945 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 92.151 85.318 517230000 511870000 0 5358100 0 0 0 0 0 0 0 0 0 0 0 0 2302 4033 2109 19740;19741;19742;19743 15630;15631;15632;15633;15634;15635;15636 15631 6 AHQSESYLPIGCK Unmodified 1488.7031 0.70311306 543 O75815 BCAR3 Breast cancer anti-estrogen resistance protein 3 yes yes 0 0 0 By MS/MS 2 0 1 1 56.196 48.049 3 0.0025686 65598 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.11 53.74 19581000 19581000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2303 543 2110 19744 15637;15638 15637 2 AHQTGIHATEELK Acetyl (Protein N-term) 1475.7369 0.73685603 2884 Q6IBS0 TWF2 Twinfilin-2 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.12 2.62 6 1 1 2 3 2 1 38.938 33.955 2;3 8.7131E-37 44208 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 198.55 135.33 848880000 37815000 653640000 157420000 0 0 0 0 0 0 0 0 0 0 0 0 2304 2884 2111 19745;19746;19747;19748;19749;19750;19751;19752 15639;15640;15641;15642;15643;15644;15645;15646;15647;15648;15649 15640 11 AHQVVEDGYEFFAK Unmodified 1638.7678 0.7678218 1873;1872;1381 P62140;P62136;P36873 PPP1CB;PPP1CA;PPP1CC Serine/threonine-protein phosphatase PP1-beta catalytic subunit;Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit no no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 2 2 1 2 2 69.505 69.742 2;3 0.0021637 79264 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.846 55.352 158150000 0 0 0 0 0 5609200 2677400 5799200 5232000 7889000 13268000 16675000 6354800 13894000 80754000 2305 1873;1872;1381 2112 19753;19754;19755;19756;19757;19758;19759;19760;19761;19762;19763;19764;19765;19766 15650;15651;15652 15650 2 AHSEVFTK Unmodified 917.46068 0.46068117 1026 P15822 HIVEP1 Zinc finger protein 40 yes yes 0 0 0 By MS/MS 2 0 1 1 15.453 11.341 2 0.044097 16921 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.95 36.479 9560600 9560600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2306 1026 2113 19767 15653 15653 1 AHSGAAPWQPLAAPSGASAQAAEQLQR Unmodified 2670.3263 0.32625996 1664 P51617 IRAK1 Interleukin-1 receptor-associated kinase 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 74.975 75.109 3 4.9652E-18 86570 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 62.1 58.205 29040000 0 0 0 0 0 4697000 0 4215200 3855400 5666900 6247300 0 0 4358500 0 2307 1664 2114 19768;19769;19770;19771;19772;19773 15654;15655;15656;15657 15656 4 AHSHEEASRPAATSTR Unmodified 1706.8085 0.80845784 3838 Q96FS4 SIPA1 Signal-induced proliferation-associated protein 1 yes yes 0 0 1 By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 5.8166 5.934 4 0.00030844 3113 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.467 42.992 33917000 0 0 0 1973600 526890 1968700 1342400 1415500 1773300 4026300 2719800 3827700 2797200 3170300 8375500 2308 3838 2115 19774;19775;19776;19777;19778;19779;19780;19781;19782;19783;19784;19785 15658;15659;15660 15658 3 AHSILNFLK Unmodified 1041.5971 0.59711507 3189 Q86X53 ERICH1 Glutamate-rich protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 44.477 44.82 2 0.029484 50370 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 48.561 5.7264 5610800 0 0 0 0 0 0 0 0 0 0 0 0 5610800 0 0 2309 3189 2116 19786 15661 15661 1 AHSIQIMK Oxidation (M) 942.49569 0.49568646 2078 Q02543 RPL18A 60S ribosomal protein L18a yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.452 15.621 2 0.0037249 15294 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 129.65 92.809 189330000 0 0 0 8561800 7768000 7702900 8516200 9978300 6466200 13845000 21743000 26078000 30909000 25827000 21937000 2310 2078 2117 19787;19788;19789;19790;19791;19792;19793;19794;19795;19796;19797;19798 15662;15663;15664;15665;15666;15667;15668;15669;15670 15667 3381 4 AHSNPMADHTLR Unmodified 1348.6306 0.63061682 4849 Q9UBP6 METTL1 tRNA (guanine-N(7)-)-methyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 20.236 20.722 3 0.00025034 20305 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.602 56.971 35425000 0 0 0 0 0 0 0 0 0 0 13057000 0 0 6307000 16061000 2311 4849 2118 19799;19800;19801 15671;15672;15673;15674 15672 2 AHSPALGVHSFSGVQR Unmodified 1648.8434 0.84338678 4345 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 44.273 44.605 3 0.00011915 50076 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 53.565 40.428 62256000 0 0 0 0 0 7949800 0 0 0 9027900 12168000 0 0 17822000 15289000 2312 4345 2119 19802;19803;19804;19805;19806;19807 15675;15676;15677;15678;15679 15679 4 AHSPFYQEGVSNALLK Unmodified 1759.8893 0.88933392 4706 Q9NWX5 ASB6 Ankyrin repeat and SOCS box protein 6 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 77.335 71.846 3 0.00023024 93231 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.663 71.402 67923000 59935000 0 7988400 0 0 0 0 0 0 0 0 0 0 0 0 2313 4706 2120 19808;19809 15680;15681 15680 2 AHSPVAVQVPGMQNNIADPEELFTK Acetyl (Protein N-term);Oxidation (M) 2749.3381 0.33812978 4811 Q9P289 STK26 Serine/threonine-protein kinase 26 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.81 3.47 4 2 15 5 1 1 1 1 1 1 1 2 2 1 2 2 88.542 87.502 2;3 1.054E-260 107822 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 243.29 226.54 874370000 0 658290000 7187500 0 9990700 18425000 7769500 14666000 9207400 7082600 31339000 26655000 6708200 16691000 60363000 2314 4811 2121 19810;19811;19812;19813;19814;19815;19816;19817;19818;19819;19820;19821;19822;19823;19824;19825;19826;19827;19828;19829;19830 15682;15683;15684;15685;15686;15687;15688;15689;15690;15691;15692;15693;15694;15695;15696;15697;15698 15685 6175 16 AHSPVAVQVPGMQNNIADPEELFTK Acetyl (Protein N-term) 2733.3432 0.34321515 4811 Q9P289 STK26 Serine/threonine-protein kinase 26 yes yes 1 0 0 By MS/MS 2.5 0.5 2 2 4 95.159 91.128 2;3 1.2128E-223 112903 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 293.67 263.53 1189300000 0 1189300000 0 0 0 0 0 0 0 0 0 0 0 0 0 2315 4811 2121 19831;19832;19833;19834 15699;15700;15701;15702 15701 4 AHSSMVGVNLPQK Unmodified 1366.7027 0.70271913 733 P00558 PGK1 Phosphoglycerate kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.59 3.05 3 14 1 1 1 1 1 1 1 1 2 2 1 2 2 45.795 45.022 2;3 2.0406E-52 49079 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 242.35 235.61 1323900000 41475000 16769000 6453300 15892000 0 9661300 10943000 16710000 0 13665000 170270000 152800000 20507000 178140000 670600000 2316 733 2122 19835;19836;19837;19838;19839;19840;19841;19842;19843;19844;19845;19846;19847;19848;19849;19850;19851 15703;15704;15705;15706;15707;15708;15709;15710;15711;15712;15713;15714;15715;15716 15707 11 AHSSMVGVNLPQK Oxidation (M) 1382.6976 0.69763375 733 P00558 PGK1 Phosphoglycerate kinase 1 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.87 3.54 4 11 2 1 1 1 1 1 1 2 2 1 2 35.271 34.073 2;3 2.5452E-11 36751 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 121.41 83.136 560340000 34194000 9009500 6952600 0 5984500 5585200 10535000 0 5775400 0 136660000 102500000 0 43891000 199250000 2317 733 2122 19852;19853;19854;19855;19856;19857;19858;19859;19860;19861;19862;19863;19864;19865;19866 15717;15718;15719;15720;15721;15722;15723;15724;15725;15726;15727;15728 15723 885 8 AHSSPASLQLGAVSPGTLTPTGVVSGPAATPTAQHLR Unmodified 3533.859 0.85904343 1516 P46937 YAP1 Transcriptional coactivator YAP1 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 80.397 80.554 4 4.9182E-55 92792 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.328 70.497 64191000 0 0 0 0 0 0 0 2517100 0 7643100 0 0 0 3048900 50982000 2318 1516 2123 19867;19868;19869;19870 15729;15730 15730 2 AHSTGEQPPQLSLATR Unmodified 1691.8591 0.85909643 2438 Q14693 LPIN1 Phosphatidate phosphatase LPIN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 48.664 48.709 3 9.4047E-05 54664 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 55.297 39.074 101010000 0 0 0 10632000 5042300 8395600 6900200 9623300 9708500 14038000 14034000 0 13608000 9023900 0 2319 2438 2124 19871;19872;19873;19874;19875;19876;19877;19878;19879;19880 15731;15732;15733;15734;15735;15736;15737;15738;15739;15740;15741 15732 11 AHSVYNFEK Unmodified 1093.5193 0.51925868 380 O43929;CON__Q2YDI2 ORC4 Origin recognition complex subunit 4 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 30.384 29.354 2 0.00045445 30103 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 146.27 121.33 161720000 52332000 21567000 14374000 0 6671500 6640500 6392300 0 4111100 0 11990000 10524000 7737000 8351100 11025000 2320 380 2125 19881;19882;19883;19884;19885;19886;19887;19888;19889;19890;19891;19892;19893 15742;15743;15744;15745;15746;15747;15748;15749;15750;15751;15752;15753;15754 15746 13 AHSWQPGIK Unmodified 1022.5298 0.52976379 3418 Q8NDI1 EHBP1 EH domain-binding protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 38.18 31.682 2 0.028119 44146 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.214 52.06 9294000 9294000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2321 3418 2126 19894 15755 15755 1 AHTDFFEAFK Unmodified 1211.5611 0.56112349 1838 P61201 COPS2 COP9 signalosome complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.38 4 2 17 3 2 1 1 1 1 2 1 1 2 2 1 2 2 1 73.699 72.421 2;3 0.00072018 93520 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.4 96.438 473730000 171340000 118790000 21544000 5651000 2480400 15322000 6431700 6295600 7388700 15395000 11646000 15432000 16125000 18400000 41493000 2322 1838 2127 19895;19896;19897;19898;19899;19900;19901;19902;19903;19904;19905;19906;19907;19908;19909;19910;19911;19912;19913;19914;19915;19916;19917 15756;15757;15758;15759;15760;15761;15762;15763;15764;15765;15766;15767;15768;15769;15770;15771;15772 15760 14 AHTISQQCISSSLLLDDAQNQNQPK Unmodified 2795.3508 0.35081973 2800 Q5THK1 PRR14L Protein PRR14L yes yes 0 0 0 By MS/MS 2 0 1 1 78.788 70.657 3 1.3532E-22 92885 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.177 75.601 14209000 14209000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2323 2800 2128 19918 15773 15773 1 AHTLLSPPSANNATFAR Unmodified 1766.9064 0.90638097 1556 P49005 POLD2 DNA polymerase delta subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 61.445 61.664 3 4.5217E-19 70338 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 73.252 55.746 75059000 0 0 0 0 0 12722000 0 0 0 11128000 0 0 11065000 11079000 29066000 2324 1556 2129 19919;19920;19921;19922;19923;19924;19925;19926 15774;15775;15776;15777;15778;15779;15780;15781;15782;15783;15784;15785 15775 12 AHTMTDDVTFWK Unmodified 1450.6551 0.65510023 2040 Q00610 CLTC Clathrin heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.06 3.8 5 1 10 2 2 2 1 1 1 1 1 1 1 1 2 70.272 68.612 2;3 1.1154E-18 88395 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 158.05 155.55 747650000 335120000 237120000 88395000 3040400 0 7265900 0 3723100 3546500 8833400 6106400 8096800 0 7011000 39387000 2325 2040 2130 19927;19928;19929;19930;19931;19932;19933;19934;19935;19936;19937;19938;19939;19940;19941;19942 15786;15787;15788;15789;15790;15791;15792;15793;15794;15795;15796 15788 10 AHTMTDDVTFWK Oxidation (M) 1466.65 0.65001485 2040 Q00610 CLTC Clathrin heavy chain 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 64.15 57.583 2;3 1.9481E-67 70854 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 232.84 218.63 295960000 184270000 71838000 39849000 0 0 0 0 0 0 0 0 0 0 0 0 2326 2040 2130 19943;19944;19945;19946 15797;15798;15799;15800;15801;15802;15803;15804 15804 3297 7 AHTSSTQLQEELEK Unmodified 1599.774 0.77402939 5301 Q9Y6Y8 SEC23IP SEC23-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 2 2 1 2 2 2 1 1 2 1 2 2 37.981 38.149 2;3 1.8757E-15 42981 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 92.747 81.308 503030000 0 0 0 20389000 24638000 32317000 28422000 57033000 25341000 36638000 37450000 65630000 51983000 38611000 84577000 2327 5301 2131 19947;19948;19949;19950;19951;19952;19953;19954;19955;19956;19957;19958;19959;19960;19961;19962;19963;19964;19965;19966 15805;15806;15807;15808;15809;15810;15811;15812;15813;15814;15815;15816;15817;15818;15819;15820;15821 15819 16 AHTVEEVNTDEDQK Unmodified 1613.7169 0.71690845 4198 Q9BVW5 TIPIN TIMELESS-interacting protein yes yes 0 0 0 By MS/MS 3 0 1 1 19.544 15.773 3 0.012175 19678 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 26.711 19.808 2223300 0 2223300 0 0 0 0 0 0 0 0 0 0 0 0 0 2328 4198 2132 19967 15822 15822 1 AHVDEFK Unmodified 844.40792 0.40791731 2638 Q16851 UGP2 UTP--glucose-1-phosphate uridylyltransferase yes yes 0 0 0 By MS/MS By MS/MS 6.5 3.5 1 1 1 1 13.712 12.141 2 0.035265 10178 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.912 46.726 46844000 0 36753000 0 0 0 0 0 0 0 0 0 0 0 0 10092000 2329 2638 2133 19968;19969 15823;15824 15823 2 AHVFECNLESSVESIISPK Unmodified 2145.0412 0.041219473 382 O60216 RAD21 Double-strand-break repair protein rad21 homolog yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 1 2 95.039 89.106 3 1.4597E-09 110745 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.953 65.195 58203000 15134000 43069000 0 0 0 0 0 0 0 0 0 0 0 0 0 2330 382 2134 19970;19971;19972 15825;15826;15827 15825 3 AHVLAASVEQATENFLEK Unmodified 1955.9953 0.99525556 1340 P35221 CTNNA1 Catenin alpha-1 yes yes 0 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 1 3 92.338 87.069 3 2.2437E-53 108333 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 142.91 133.5 230020000 38236000 191780000 0 0 0 0 0 0 0 0 0 0 0 0 0 2331 1340 2135 19973;19974;19975;19976 15828;15829;15830;15831 15831 4 AHVQEVAQHNLK Unmodified 1372.7211 0.72114638 3151 Q86UP2 KTN1 Kinectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6 4 4 4 2 1 1 1 1 1 1 19.129 17.251 2;3 9.1454E-23 26203 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 182.28 157.44 341440000 272080000 15643000 26315000 0 0 0 0 0 0 0 4323700 8273700 3663500 0 11141000 2332 3151 2136 19977;19978;19979;19980;19981;19982;19983;19984 15832;15833;15834;15835;15836 15834 3 AHVVPCFDASK Unmodified 1229.5863 0.58629239 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.64 7 2 19 3 3 3 2 1 2 2 1 2 1 2 1 2 1 2 42.626 40.898 2;3 5.7412E-06 52250 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 119.68 102.21 4589800000 2093700000 1182000000 1043600000 5957400 7333400 9339500 23428000 13605000 18957000 9707600 55763000 13978000 9632000 27112000 75708000 2333 1124 2137 19985;19986;19987;19988;19989;19990;19991;19992;19993;19994;19995;19996;19997;19998;19999;20000;20001;20002;20003;20004;20005;20006;20007;20008;20009;20010;20011;20012 15837;15838;15839;15840;15841;15842;15843;15844;15845;15846;15847;15848;15849;15850;15851;15852;15853;15854;15855;15856;15857;15858;15859;15860;15861;15862;15863;15864;15865;15866;15867 15860 28 AHWLSIEGCQPAIPENPPPAPK Unmodified 2408.1947 0.19470042 1607 P49848 TAF6 Transcription initiation factor TFIID subunit 6 yes yes 0 0 0 By MS/MS 2 0 1 1 83.648 75.517 3 5.7185E-13 98661 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.225 59.273 20466000 20466000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2334 1607 2138 20013 15868;15869 15868 2 AHWTPFEGQK Unmodified 1199.5724 0.57235688 1224 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 0 0 0 By MS/MS 2 0 2 2 54.827 46.718 2;3 0.0010711 64133 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.148 60.958 87107000 87107000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2335 1224 2139 20014;20015 15870;15871;15872;15873 15870 4 AHYEAEIK Unmodified 959.47125 0.47124585 3696 Q92990 GLMN Glomulin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 21.139 17.364 2 0.01951 22860 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.794 29.513 160350000 7275500 80668000 72404000 0 0 0 0 0 0 0 0 0 0 0 0 2336 3696 2140 20016;20017;20018 15874 15874 1 AHYGGFTVQNEANK Unmodified 1534.7165 0.71645494 758 P02675 FGB Fibrinogen beta chain;Fibrinopeptide B;Fibrinogen beta chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 33.908 31.905 3 0.0010798 38952 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 55.899 50.62 27475000 8141100 0 0 8852400 0 0 0 10481000 0 0 0 0 0 0 0 2337 758 2141 20019;20020;20021 15875;15876;15877;15878 15876 4 AHYQSFPPPVADFIK Unmodified 1715.8671 0.86714192 215 O14787 TNPO2 Transportin-2 yes yes 0 0 0 By MS/MS 2 0 2 2 91.728 83.597 3 0.00016256 108376 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.022 62.168 23954000 23954000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2338 215 2142 20022;20023 15879;15880;15881;15882 15881 4 AIAAAHTFLLK Unmodified 1154.6812 0.68117905 536 O75718 CRTAP Cartilage-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 62.497 61.966 3 0.0022109 69708 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 61.344 39.351 104190000 16866000 0 0 2100400 4127400 8493200 6059700 5506300 4557900 7807500 8615500 12487000 5425000 6579900 15566000 2339 536 2143 20024;20025;20026;20027;20028;20029;20030;20031;20032;20033;20034;20035;20036 15883;15884;15885;15886;15887;15888 15887 5 AIAAEDPSLDFR Unmodified 1303.6408 0.64083038 3080 Q7Z3B3 KANSL1 KAT8 regulatory NSL complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 67.362 67.446 2 0.001746 77278 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 65.347 50.196 24628000 0 0 0 2947700 0 0 0 2746700 0 3489300 4437600 7028200 3979000 0 0 2340 3080 2144 20037;20038;20039;20040;20041;20042;20043;20044;20045 15889;15890;15891;15892;15893;15894;15895;15896;15897 15893 9 AIAAEDPSLDFRNNPTK Unmodified 1857.9221 0.92209062 3080 Q7Z3B3 KANSL1 KAT8 regulatory NSL complex subunit 1 yes yes 0 0 1 By MS/MS 2 0 1 1 65.09 59.172 3 0.0013311 75809 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 57.499 48.68 12923000 0 12923000 0 0 0 0 0 0 0 0 0 0 0 0 0 2341 3080 2145 20046 15898;15899 15898 2 AIAALISEK Unmodified 914.54368 0.54368251 3257 Q8IXB1 DNAJC10 DnaJ homolog subfamily C member 10 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 54.404 54.512 2 0.024299 62193 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 50.703 30.781 151400000 0 0 0 0 2560800 3611100 4452300 3990200 2485100 13213000 63194000 0 9039500 48851000 0 2342 3257 2146 20047;20048;20049;20050;20051;20052;20053;20054;20055 15900;15901 15901 2 AIACLLFGGSR Unmodified 1163.6121 0.61211321 1333 P33992 MCM5 DNA replication licensing factor MCM5 yes yes 0 0 0 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 80.364 80.483 2 0.035522 92710 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.556 24.178 11135000 0 0 0 0 0 939060 0 0 0 0 0 1989300 966310 0 7240400 2343 1333 2147 20056;20057;20058;20059 15902 15902 1 AIACVVTACSAELEK Unmodified 1620.7851 0.78512813 2828 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 72.169 66.442 2 1.5504E-16 84069 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.76 111.18 35695000 0 35695000 0 0 0 0 0 0 0 0 0 0 0 0 0 2344 2828 2148 20060 15903 15903 1 AIADDQRSYSK Unmodified 1252.6048 0.60477922 623 O95155 UBE4B Ubiquitin conjugation factor E4 B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 15.026 11.773 2;3 0.00054998 15578 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.84 99.549 22950000 9457200 11726000 1766800 0 0 0 0 0 0 0 0 0 0 0 0 2345 623 2149 20061;20062;20063 15904;15905 15904 2 AIADMLR Unmodified 788.42146 0.42145889 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 53.87 54.036 2 0.02342 59911 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.086 31.561 42785000 0 0 0 0 2725700 0 3417100 3500100 3012300 0 6096200 0 0 7391700 16642000 2346 5187 2150 20064;20065;20066;20067;20068;20069;20070 15906 15906 1 AIADTGANVVVTGGK Unmodified 1371.7358 0.73579339 1641 P50990 CCT8 T-complex protein 1 subunit theta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.56 3.99 2 11 2 12 4 8 3 1 1 1 1 1 1 1 1 1 1 1 1 51.626 50.121 2;3 1.8427E-30 93503 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 150.68 101.89 6820900000 444020000 3406000000 22259000 114900000 107420000 267260000 170260000 130210000 130080000 347840000 379650000 272650000 228550000 246570000 553200000 2347 1641 2151 20071;20072;20073;20074;20075;20076;20077;20078;20079;20080;20081;20082;20083;20084;20085;20086;20087;20088;20089;20090;20091;20092;20093;20094;20095;20096;20097 15907;15908;15909;15910;15911;15912;15913;15914;15915;15916;15917;15918;15919;15920;15921;15922;15923;15924;15925;15926;15927;15928;15929;15930;15931;15932;15933;15934;15935;15936;15937;15938;15939;15940 15925 33 AIADWYNEK Unmodified 1108.5189 0.51892433 916 P10155 TROVE2 60 kDa SS-A/Ro ribonucleoprotein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 59.136 53.439 2 0.007721 66231 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 143.89 125.11 255820000 8526400 243290000 4008700 0 0 0 0 0 0 0 0 0 0 0 0 2348 916 2152 20098;20099;20100;20101 15941;15942 15941 1 AIAEEICEQAVVHGFSADLHCISESDK Unmodified 3014.375 0.37498557 4844 Q9UBK8 MTRR Methionine synthase reductase yes yes 0 0 0 By MS/MS 2 0 1 1 91.48 83.35 4 1.852E-46 108100 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 108.44 106.43 36343000 36343000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2349 4844 2153 20102 15943;15944 15944 2 AIAEEICEQAVVHGFSADLHCISESDKYDLK Unmodified 3533.6443 0.64428413 4844 Q9UBK8 MTRR Methionine synthase reductase yes yes 0 0 1 By MS/MS 2 0 2 2 93.071 84.941 4;5 7.2754E-16 110139 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.98 61.975 50636000 50636000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2350 4844 2154 20103;20104 15945;15946;15947 15946 3 AIAEGLGSELLVGTTK Unmodified 1557.8614 0.86138784 2665 Q32P44 EML3 Echinoderm microtubule-associated protein-like 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 81.414 81.511 2 3.3126E-06 93966 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 89.548 64.162 43990000 0 0 0 2216000 0 0 3042500 4970800 4081100 7491800 4805400 5166900 3126100 0 9089400 2351 2665 2155 20105;20106;20107;20108;20109;20110;20111;20112;20113 15948;15949;15950;15951;15952;15953;15954;15955;15956 15951 9 AIAELGIYPAVDPLDSTSR Unmodified 1987.0262 0.026221336 823 P06576 ATP5B ATP synthase subunit beta, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 88.894 88.965 2 4.5375E-24 102987 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 123.64 106.7 42440000 0 0 0 1167100 1872200 2909300 1668000 3442800 1817700 5854700 4186900 4932100 1719900 3019400 9849500 2352 823 2156 20114;20115;20116;20117;20118;20119;20120;20121;20122;20123;20124;20125 15957;15958;15959;15960;15961;15962;15963;15964;15965;15966;15967;15968;15969;15970 15960 14 AIAESLNSCRPSDASATR Unmodified 1904.901 0.9010376 3969 Q96RL1 UIMC1 BRCA1-A complex subunit RAP80 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 36.578 36.859 3 2.5286E-05 41333 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 56.851 45.572 66172000 0 0 0 6038600 0 0 0 5192200 0 8297700 0 9285200 11282000 11099000 14977000 2353 3969 2157 20126;20127;20128;20129;20130;20131;20132 15971;15972;15973;15974 15974 4 AIAFLQQPR Unmodified 1042.5924 0.59236404 1134 P22102 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.408 65.496 2 0.0033956 74380 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 105.2 84.501 451210000 0 0 0 13493000 15662000 43596000 23688000 22752000 16078000 35193000 53103000 53898000 31395000 39867000 102480000 2354 1134 2158 20133;20134;20135;20136;20137;20138;20139;20140;20141;20142;20143;20144 15975;15976;15977;15978;15979;15980;15981;15982;15983 15977 5 AIAHYEQSADYYK Unmodified 1557.71 0.70997257 1750;4342 P54920;Q9H115 NAPA;NAPB Alpha-soluble NSF attachment protein;Beta-soluble NSF attachment protein no no 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 42.65 37.56 3 0.0054661 49087 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 52.816 40.651 150600000 10181000 91163000 49254000 0 0 0 0 0 0 0 0 0 0 0 0 2355 1750;4342 2159 20145;20146;20147;20148 15984;15985 15984 2 AIAIMEVAHGK Unmodified 1138.6169 0.61686423 4602 Q9NRG4 SMYD2 N-lysine methyltransferase SMYD2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 55.33 53.912 3 0.0042542 77003 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.998 42.11 113740000 67448000 0 7627100 0 0 0 0 0 2077600 0 8581300 7600900 0 3284400 17123000 2356 4602 2160 20149;20150;20151;20152;20153;20154;20155 15986;15987;15988 15987 3 AIAIMEVAHGK Oxidation (M) 1154.6118 0.61177885 4602 Q9NRG4 SMYD2 N-lysine methyltransferase SMYD2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 1 2 42.122 37.075 2;3 0.0017404 50633 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.412 60.631 72975000 46023000 5916500 21036000 0 0 0 0 0 0 0 0 0 0 0 0 2357 4602 2160 20156;20157;20158;20159 15989;15990;15991;15992 15990 6004 3 AIAINTFLPK Unmodified 1086.6437 0.64373091 3640 Q92615 LARP4B La-related protein 4B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 82.899 82.33 2 0.0082115 95320 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 60.59 51.376 158310000 9275600 0 0 4710600 7071800 12398000 10363000 12812000 10530000 13897000 12952000 14499000 9581600 14562000 25654000 2358 3640 2161 20160;20161;20162;20163;20164;20165;20166;20167;20168;20169;20170;20171;20172 15993;15994;15995;15996;15997;15998;15999;16000;16001;16002;16003;16004 15999 12 AIALFTPDACGLSDPAHVESLQEK Unmodified 2568.253 0.25300316 922 P10588 NR2F6 Nuclear receptor subfamily 2 group F member 6 yes yes 0 0 0 By MS/MS 3 0 1 1 87.492 84.277 3 0.0017883 100930 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 34.685 27.886 5384200 0 5384200 0 0 0 0 0 0 0 0 0 0 0 0 0 2359 922 2162 20173 16005 16005 1 AIANECQANFISIK Unmodified 1577.7872 0.78717704 1755 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.16 3.73 5 2 12 1 5 1 1 1 1 1 1 1 1 1 1 1 1 1 71.723 70.193 2;3 3.8417E-40 79987 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 186.81 178.93 4562100000 61930000 4183500000 25647000 10255000 8231000 11800000 10309000 9041900 11024000 13714000 31669000 62003000 14445000 23751000 84762000 2360 1755 2163 20174;20175;20176;20177;20178;20179;20180;20181;20182;20183;20184;20185;20186;20187;20188;20189;20190;20191;20192 16006;16007;16008;16009;16010;16011;16012;16013;16014;16015;16016;16017;16018;16019;16020;16021;16022;16023;16024 16012 19 AIAQLFEK Unmodified 918.51747 0.51746776 2113 Q05209 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.809 62.904 2 0.0082674 72168 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 86.794 36.667 159750000 0 0 0 10311000 9828600 13122000 12376000 9789000 11975000 13655000 17757000 16245000 13838000 12163000 18686000 2361 2113 2164 20193;20194;20195;20196;20197;20198;20199;20200;20201;20202;20203;20204 16025;16026;16027;16028;16029;16030;16031;16032;16033 16031 8 AIATVSENTK Unmodified 1032.5451 0.54513908 2510 Q15276 RABEP1 Rab GTPase-binding effector protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 19.651 19.909 2 0.0035119 20379 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 76.221 13.563 39454000 0 0 0 0 1891900 3324200 0 2070200 2034600 3447100 5785100 4570300 3313600 5226700 7789900 2362 2510 2165 20205;20206;20207;20208;20209;20210;20211;20212;20213;20214 16034;16035;16036;16037;16038;16039;16040;16041;16042 16035 9 AIAVLTSGGDAQGMNAAVR Oxidation (M) 1816.9101 0.91014572 861 P08237 PFKM ATP-dependent 6-phosphofructokinase, muscle type yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 56.078 56.159 2 3.4719E-53 64457 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 146.36 137.63 151000000 0 0 0 6018700 14738000 10409000 13727000 15383000 8825600 22675000 18064000 16950000 12423000 11787000 0 2363 861 2166 20215;20216;20217;20218;20219;20220;20221;20222;20223;20224;20225 16043;16044;16045;16046;16047;16048;16049;16050;16051;16052;16053 16053 1086 10 AIAVLTSGGDAQGMNAAVR Unmodified 1800.9152 0.9152311 861 P08237 PFKM ATP-dependent 6-phosphofructokinase, muscle type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.614 68.694 2 3.0307E-38 78764 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 148.18 148.18 215030000 0 0 0 6309700 14471000 13729000 13439000 26061000 7991500 22257000 19805000 25077000 13463000 20174000 32257000 2364 861 2166 20226;20227;20228;20229;20230;20231;20232;20233;20234;20235;20236;20237 16054;16055;16056;16057;16058;16059;16060;16061;16062;16063;16064;16065;16066;16067;16068 16062 15 AIAVTAQEMMTK Oxidation (M) 1308.6418 0.64175835 5201 Q9Y4G6 TLN2 Talin-2 yes yes 0 1 0 By MS/MS 2 0 1 1 49.809 44.103 2 0.0071707 57235 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.321 51.648 28783000 0 28783000 0 0 0 0 0 0 0 0 0 0 0 0 0 2365 5201 2167 20238 16069 16069 6597 1 AIAVTAQEMMTK Unmodified 1292.6468 0.64684373 5201 Q9Y4G6 TLN2 Talin-2 yes yes 0 0 0 By MS/MS 2 0 1 1 66.781 60.864 2 0.0030452 77729 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.029 66.367 56367000 0 56367000 0 0 0 0 0 0 0 0 0 0 0 0 0 2366 5201 2167 20239 16070 16070 1 AIAVTVQEMVTK Oxidation (M) 1304.701 0.70098779 5187 Q9Y490 TLN1 Talin-1 yes yes 0 1 0 By matching By MS/MS 2.67 0.471 1 2 1 2 56.572 51.228 2 0.0040196 63604 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 76.465 45.093 49302000 421240 48880000 0 0 0 0 0 0 0 0 0 0 0 0 0 2367 5187 2168 20240;20241;20242 16071;16072 16072 6557 2 AIAVTVQEMVTK Unmodified 1288.7061 0.70607317 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS 3 0 1 1 76.555 73.076 2 0.015275 88039 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 58.699 44.025 8390600 0 8390600 0 0 0 0 0 0 0 0 0 0 0 0 0 2368 5187 2168 20243 16073 16073 1 AICTEAGLMALR Oxidation (M) 1320.653 0.65299174 1875 P62191 PSMC1 26S protease regulatory subunit 4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.758 62.853 2 0.00019364 71574 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 82.645 51.416 201840000 0 0 0 12761000 10803000 15526000 8339100 4510800 4659500 26379000 35839000 50987000 5745400 8281200 18007000 2369 1875 2169 20244;20245;20246;20247;20248;20249;20250;20251;20252;20253;20254;20255 16074;16075;16076;16077;16078;16079;16080;16081;16082;16083;16084;16085 16083 3031 12 AICTEAGLMALR Unmodified 1304.6581 0.65807712 1875 P62191 PSMC1 26S protease regulatory subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 74.599 74.636 2 0.0002223 86030 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 83.998 70.544 168230000 0 0 0 7499300 10197000 18141000 3700700 0 0 25607000 29988000 42406000 0 8562500 22125000 2370 1875 2169 20256;20257;20258;20259;20260;20261;20262;20263;20264;20265 16086;16087;16088;16089;16090;16091;16092;16093;16094;16095 16087 10 AIDDNMSLDEIEK Unmodified 1491.6763 0.67628918 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 69.172 68.012 2 4.2954E-22 84892 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 174.4 174.4 489640000 7840300 397990000 0 3097200 3417700 5736300 3700200 4786700 3060500 5314900 9075800 10618000 3981400 8923800 22096000 2371 1300 2170 20266;20267;20268;20269;20270;20271;20272;20273;20274;20275;20276;20277;20278;20279;20280 16096;16097;16098;16099;16100;16101;16102;16103;16104;16105;16106;16107;16108;16109;16110;16111 16099 16 AIDDNMSLDEIEK Oxidation (M) 1507.6712 0.67120381 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 1 3 1 1 1 1 1 1 2 1 54.076 52.056 2 5.341E-21 65968 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.99 124.3 120600000 5121100 63929000 0 0 0 0 3477300 0 0 9576900 8999400 9741800 6725300 5600300 7430600 2372 1300 2170 20281;20282;20283;20284;20285;20286;20287;20288;20289;20290;20291;20292;20293 16112;16113;16114;16115;16116;16117;16118;16119;16120 16113 1917 9 AIDDNQEMPPNK Oxidation (M) 1386.6085 0.60854397 3465 Q8NI27 THOC2 THO complex subunit 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 17.342 17.528 2 0.0026784 18035 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 58.676 54.064 36006000 0 0 0 2721800 1829000 3515400 3035100 2299400 2760300 3319400 2179900 3849600 3810700 2648600 4036600 2373 3465 2171 20294;20295;20296;20297;20298;20299;20300;20301;20302;20303;20304;20305 16121;16122;16123;16124;16125;16126;16127 16121 4995 7 AIDDSSASISLAQLTK Unmodified 1618.8414 0.84138068 3111 Q7Z6E9 RBBP6 E3 ubiquitin-protein ligase RBBP6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 79.089 78.517 2 3.8608E-50 96439 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 160.38 124.84 154540000 0 72261000 0 0 9059900 0 5898300 5193600 9047300 9484500 9762400 10827000 7451600 5638000 9917400 2374 3111 2172 20306;20307;20308;20309;20310;20311;20312;20313;20314;20315;20316;20317 16128;16129;16130;16131;16132;16133;16134;16135;16136;16137;16138;16139 16130 12 AIDIYEQVGTNAMDSPLLK Oxidation (M) 2093.0351 0.035071462 1750 P54920 NAPA Alpha-soluble NSF attachment protein yes yes 0 1 0 By MS/MS 2 0 1 1 86.52 81.743 2 6.4439E-41 101557 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 132.31 121.98 40440000 0 40440000 0 0 0 0 0 0 0 0 0 0 0 0 0 2375 1750 2173 20318 16140 16140 2846 1 AIDIYEQVGTNAMDSPLLK Unmodified 2077.0402 0.04015684 1750 P54920 NAPA Alpha-soluble NSF attachment protein yes yes 0 0 0 By MS/MS 2 0 1 1 91.99 87.079 3 1.1904E-09 108219 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.205 88.357 63155000 0 63155000 0 0 0 0 0 0 0 0 0 0 0 0 0 2376 1750 2173 20319 16141 16141 1 AIDLFTDAIK Unmodified 1105.6019 0.60192568 1625 P50502;Q8NFI4;Q8IZP2 ST13;ST13P5;ST13P4 Hsc70-interacting protein;Putative protein FAM10A5;Putative protein FAM10A4 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.56 6 3 20 3 5 1 2 1 1 2 1 1 2 2 2 2 2 2 83.226 82.229 1;2 3.5686E-06 102381 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 147.51 110.49 8205000000 950500000 5374100000 321690000 29047000 31503000 53861000 55420000 62660000 41728000 150090000 198540000 196850000 56980000 167140000 514890000 2377 1625 2174 20320;20321;20322;20323;20324;20325;20326;20327;20328;20329;20330;20331;20332;20333;20334;20335;20336;20337;20338;20339;20340;20341;20342;20343;20344;20345;20346;20347;20348 16142;16143;16144;16145;16146;16147;16148;16149;16150;16151;16152;16153;16154;16155;16156;16157;16158;16159;16160;16161;16162;16163 16145 21 AIDLQIK Unmodified 799.48035 0.48035398 3591 Q8WXH0 SYNE2 Nesprin-2 yes yes 0 0 0 By MS/MS 10 0 1 1 45.491 45.642 2 0.049926 51264 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 63.287 2.5784 11385000 0 0 0 0 0 0 0 0 11385000 0 0 0 0 0 0 2378 3591 2175 20349 16164 16164 1 AIDMCPK Oxidation (M) 849.37246 0.37245979 4035 Q99615 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 9.5757 9.8838 2 0.04898 8228 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 49.59 29.743 10051000 0 0 0 0 0 0 0 0 0 0 0 4159400 0 0 5891700 2379 4035 2176 20350;20351 16165 16165 1 AIDNAADLLIFGK Unmodified 1359.7398 0.73981614 5253 Q9Y5X2 SNX8 Sorting nexin-8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 89.124 89.229 2 0.0069439 103632 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 58.37 37.5 21964000 0 0 0 0 1329100 2326300 1402000 2905700 1302800 3149400 3507300 2036200 2120400 1884900 0 2380 5253 2177 20352;20353;20354;20355;20356;20357;20358;20359;20360;20361 16166;16167;16168 16167 3 AIDSSNLK Unmodified 846.4447 0.44469675 2743 Q5JVF3 PCID2 PCI domain-containing protein 2 yes yes 0 0 0 By MS/MS 10 0 1 1 16.182 16.695 2 0.010501 15617 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.451 27.879 14267000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14267000 2381 2743 2178 20362 16169 16169 1 AIDVPGQVQVYELQPSNLEADQPLQAIMEMGAVAADK Unmodified 3937.9442 0.94415455 694 O95817 BAG3 BAG family molecular chaperone regulator 3 yes yes 0 0 0 By MS/MS 2 0 1 1 102.02 97.301 4 0.020972 120238 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 18.41 15.25 9987300 0 9987300 0 0 0 0 0 0 0 0 0 0 0 0 0 2382 694 2179 20363 16170 16170 1 AIEAAPQEPEQK Unmodified 1309.6514 0.65139506 3781 Q96CP2 FLYWCH2 FLYWCH family member 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 1 2 2 2 2 2 2 2 26.817 27.019 2;3 3.1962E-08 28565 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 150.08 140.64 4272600000 0 0 0 247910000 299290000 321420000 338430000 233660000 252890000 291730000 517850000 490970000 365940000 355930000 556600000 2383 3781 2180 20364;20365;20366;20367;20368;20369;20370;20371;20372;20373;20374;20375;20376;20377;20378;20379;20380;20381;20382;20383;20384;20385;20386 16171;16172;16173;16174;16175;16176;16177;16178;16179;16180;16181;16182;16183;16184;16185;16186 16184 13 AIEAVAISPWK Unmodified 1183.6601 0.66010926 4394 Q9H4A4 RNPEP Aminopeptidase B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 6.9 3.81 3 1 6 1 2 1 1 1 1 1 1 1 79.064 77.231 2 1.5441E-06 92866 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 140.75 115.02 517850000 43055000 339980000 43677000 1902500 0 0 0 0 0 5671500 13192000 11084000 0 13738000 45550000 2384 4394 2181 20387;20388;20389;20390;20391;20392;20393;20394;20395;20396 16187;16188;16189;16190;16191;16192;16193;16194;16195;16196;16197;16198 16190 12 AIEDEGGNPDEIEITSEGNK Unmodified 2115.9444 0.94440178 2532 Q15424 SAFB Scaffold attachment factor B1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 57.336 57.416 2 2.4629E-61 65355 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 166.09 158.36 130640000 0 0 0 11547000 9807600 13254000 7365900 5136800 9168800 12322000 10870000 0 10755000 11069000 29342000 2385 2532 2182 20397;20398;20399;20400;20401;20402;20403;20404;20405;20406;20407 16199;16200;16201;16202;16203;16204;16205;16206 16199 8 AIEDEGGNPDEIEITSEGNKK Unmodified 2244.0394 0.039364797 2532 Q15424 SAFB Scaffold attachment factor B1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 51.564 49.641 3 2.3753E-18 63543 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.63 97.52 124770000 14089000 56315000 0 0 9586300 0 8689700 0 0 0 14335000 0 11494000 10260000 0 2386 2532 2183 20408;20409;20410;20411;20412;20413;20414;20415 16207;16208;16209;16210;16211;16212;16213;16214;16215 16209 8 AIEEGIPAFTCEEYVK Unmodified 1854.871 0.87096625 5110 Q9Y2L1 DIS3 Exosome complex exonuclease RRP44 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 8.36 3.15 2 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 80.868 80.199 2 5.9607E-18 95363 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 116.24 106.58 594170000 0 475900000 4995200 0 4743300 13059000 5560000 5276300 5791700 14184000 13142000 13288000 5924800 8973900 23335000 2387 5110 2184 20416;20417;20418;20419;20420;20421;20422;20423;20424;20425;20426;20427;20428;20429 16216;16217;16218;16219;16220;16221;16222;16223;16224;16225 16221 6 AIEEGTLEEIEEEVRQK Unmodified 2000.9902 0.99022976 1656 P51532 SMARCA4 Transcription activator BRG1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 3 2 1 86.938 81.351 2;3 6.4914E-70 102992 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 166.9 144.75 234690000 157480000 77215000 0 0 0 0 0 0 0 0 0 0 0 0 0 2388 1656 2185 20430;20431;20432;20433;20434;20435 16226;16227;16228;16229;16230;16231;16232 16227 7 AIEEIAGVGVPELINSPK Unmodified 1835.004 0.0040293305 4236 Q9BXW9 FANCD2 Fanconi anemia group D2 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.55 3.8 3 2 6 4 1 1 1 1 1 1 1 88.497 86.869 2;3 1.8388E-20 107674 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.79 103.87 297720000 0 280850000 1396200 0 0 0 0 0 0 4396200 2026900 2125300 1501100 1371500 4050800 2389 4236 2186 20436;20437;20438;20439;20440;20441;20442;20443;20444;20445;20446 16233;16234;16235;16236;16237;16238;16239;16240;16241;16242;16243 16234 10 AIEEQMVAAK Unmodified 1088.5536 0.55359527 4319 Q9H0A0 NAT10 N-acetyltransferase 10 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 36.293 36.459 2 0.0010978 40119 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 109.86 63.492 63265000 0 0 0 2376900 2685000 2083500 12894000 12636000 9841300 4421900 4247500 5892000 0 2573400 3613000 2390 4319 2187 20447;20448;20449;20450;20451;20452;20453;20454;20455;20456;20457 16244;16245;16246;16247;16248;16249;16250;16251 16246 8 AIEEQMVAAK Oxidation (M) 1104.5485 0.5485099 4319 Q9H0A0 NAT10 N-acetyltransferase 10 yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 20.312 20.468 2 0.0087548 20920 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 51.346 23.172 16203000 0 0 0 0 0 0 0 3860200 12343000 0 0 0 0 0 0 2391 4319 2187 20458;20459 16252 16252 5779 1 AIEFLNNPPEEAPR Unmodified 1595.7944 0.79437091 2684 Q4G0J3 LARP7 La-related protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 72.469 72.582 2 5.828E-06 83066 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.156 75.623 62784000 0 0 0 5908400 0 0 6942800 0 0 10687000 8319400 11093000 0 8831400 11002000 2392 2684 2188 20460;20461;20462;20463;20464;20465;20466;20467;20468 16253;16254;16255;16256;16257;16258;16259;16260;16261 16256 9 AIEFLSAFK Unmodified 1024.5593 0.55933258 2664 Q32P41 TRMT5 tRNA (guanine(37)-N1)-methyltransferase yes yes 0 0 0 By MS/MS 2 0 1 1 91.592 83.462 2 0.022185 108219 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.26 48.628 9619400 9619400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2393 2664 2189 20469 16262 16262 1 AIEGFNQSSHQK Unmodified 1344.6422 0.64222736 2599 Q16222 UAP1 UDP-N-acetylhexosamine pyrophosphorylase;UDP-N-acetylgalactosamine pyrophosphorylase;UDP-N-acetylglucosamine pyrophosphorylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 5.33 3.82 7 2 6 2 4 3 1 1 1 1 1 1 22.61 20.407 2;3 4.8835E-19 26117 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 159.79 138.82 1192100000 397440000 378660000 324960000 0 0 13918000 0 0 0 8997300 16427000 11723000 0 13849000 26116000 2394 2599 2190 20470;20471;20472;20473;20474;20475;20476;20477;20478;20479;20480;20481;20482;20483;20484 16263;16264;16265;16266;16267;16268;16269;16270;16271;16272 16266 7 AIEHADGGVAAGVAVLDNPYPV Unmodified 2134.0695 0.069483134 1547 P48637 GSS Glutathione synthetase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.3 0.458 7 3 3 5 2 88.736 84.158 2;3 9.0587E-61 102248 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 161.1 138.63 407370000 53726000 319560000 34085000 0 0 0 0 0 0 0 0 0 0 0 0 2395 1547 2191 20485;20486;20487;20488;20489;20490;20491;20492;20493;20494 16273;16274;16275;16276;16277;16278;16279;16280;16281;16282 16282 9 AIEINPDSAQPYK Unmodified 1444.7198 0.71980898 1625 P50502;Q8NFI4;Q8IZP2 ST13;ST13P5;ST13P4 Hsc70-interacting protein;Putative protein FAM10A5;Putative protein FAM10A4 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 56.376 56.042 2 2.2692E-41 63518 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 171.85 162.94 1123300000 0 33281000 0 39895000 35537000 33675000 51093000 48220000 31976000 92736000 149730000 141840000 57850000 123520000 283900000 2396 1625 2192 20495;20496;20497;20498;20499;20500;20501;20502;20503;20504;20505;20506;20507 16283;16284;16285;16286;16287;16288;16289;16290;16291;16292;16293;16294;16295;16296;16297;16298;16299;16300 16297 18 AIELFSVGQGPAK Unmodified 1315.7136 0.71360139 1280 P30419 NMT1 Glycylpeptide N-tetradecanoyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 78.106 76.981 2 1.8694E-16 93806 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 152.28 132.28 571530000 44527000 364190000 21935000 3431600 3484500 5791400 5052700 5471100 4219100 6130700 20854000 21694000 5367000 12799000 46581000 2397 1280 2193 20508;20509;20510;20511;20512;20513;20514;20515;20516;20517;20518;20519;20520;20521;20522;20523 16301;16302;16303;16304;16305;16306;16307;16308;16309;16310;16311;16312;16313;16314;16315;16316;16317;16318;16319;16320;16321;16322;16323;16324;16325 16318 25 AIELLQEFSDQHPENAAEIK Unmodified 2281.1226 0.12264092 578 O76094 SRP72 Signal recognition particle subunit SRP72 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83.762 82.783 3 1.8884E-61 95435 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 133.47 119.64 317450000 24076000 123320000 6851500 1047800 2662600 11688000 3737600 11970000 11618000 16823000 12745000 10837000 6887200 11201000 61992000 2398 578 2194 20524;20525;20526;20527;20528;20529;20530;20531;20532;20533;20534;20535;20536;20537;20538 16326;16327;16328;16329;16330;16331;16332;16333;16334;16335;16336;16337;16338;16339;16340;16341 16330 16 AIELNPANAVYFCNR Unmodified 1750.8461 0.8460889 364 O43765 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha yes yes 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.974 81.034 2 0.00025379 93829 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 97.456 78 117160000 0 0 0 1673500 2800100 5502800 4465400 6794700 5590600 9458300 12952000 14766000 6049600 9940400 37168000 2399 364 2195 20539;20540;20541;20542;20543;20544;20545;20546;20547;20548;20549;20550 16342;16343 16343 0 AIELQLQVK Unmodified 1040.623 0.62299547 4425 Q9H6T3 RPAP3 RNA polymerase II-associated protein 3 yes yes 0 0 0 By MS/MS 2 0 1 1 76.397 71.56 2 0.012364 89432 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.097 28.656 14668000 0 14668000 0 0 0 0 0 0 0 0 0 0 0 0 0 2400 4425 2196 20551 16344 16344 1 AIELSLK Unmodified 772.46945 0.46945494 3659 Q92783 STAM Signal transducing adapter molecule 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 56.31 56.544 2 0.035265 64340 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 70.912 8.1982 108310000 0 0 0 0 0 10980000 9707500 18881000 7601800 12404000 15460000 0 13606000 11714000 7955600 2401 3659 2197 20552;20553;20554;20555;20556;20557;20558;20559;20560 16345;16346;16347;16348;16349 16345 5 AIELYNDK Unmodified 964.48656 0.48656157 3761 Q96BN8 OTULIN Ubiquitin thioesterase otulin yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 38.683 38.836 2 0.01266 43266 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 74.127 41.287 137010000 0 0 0 9423300 6825300 19334000 11677000 8211100 7637600 17007000 0 13684000 11345000 15142000 16723000 2402 3761 2198 20561;20562;20563;20564;20565;20566;20567;20568;20569;20570;20571 16350;16351;16352;16353;16354 16350 1 AIEMEENRTK Unmodified 1219.5867 0.58668632 3098 Q7Z4H7 HAUS6 HAUS augmin-like complex subunit 6 yes yes 0 0 1 By MS/MS 3 0 1 1 19.4 15.683 3 0.025165 19571 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 51.445 33.309 3270100 0 3270100 0 0 0 0 0 0 0 0 0 0 0 0 0 2403 3098 2199 20572 16355 16355 1 AIEMLGGELGSK Oxidation (M) 1219.6118 0.61183843 854 P07954 FH Fumarate hydratase, mitochondrial yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 50.058 50.769 2 0.0020347 56385 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.344 32.426 22747000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22747000 2404 854 2200 20573;20574 16356;16357 16356 1076 2 AIEMLGGELGSK Unmodified 1203.6169 0.61692381 854 P07954 FH Fumarate hydratase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 67.252 67.609 2 0.0026549 76711 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.07 37.418 42954000 0 0 0 0 0 0 0 0 0 0 0 0 0 5763800 37190000 2405 854 2200 20575;20576;20577 16358;16359;16360 16358 3 AIENCEYAFNLK Unmodified 1470.6813 0.68131498 2579 Q15796 SMAD2 Mothers against decapentaplegic homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 68.752 68.821 2 5.9817E-08 79119 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 140.75 108.43 165950000 0 0 0 8344400 10318000 13993000 13441000 8871900 10627000 16461000 21949000 19292000 14221000 0 28432000 2406 2579 2201 20578;20579;20580;20581;20582;20583;20584;20585;20586;20587;20588 16361;16362;16363;16364;16365;16366;16367;16368;16369;16370;16371;16372;16373 16361 13 AIENELLAR Unmodified 1027.5662 0.56620887 1547 P48637 GSS Glutathione synthetase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 55.344 55.648 2 0.014466 62691 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 98.299 40.74 33946000 0 0 0 0 0 0 5440100 0 0 0 0 18257000 0 10249000 0 2407 1547 2202 20589;20590;20591;20592 16374;16375;16376;16377 16377 3 AIENTASVSEHK Unmodified 1284.631 0.63099397 4236 Q9BXW9 FANCD2 Fanconi anemia group D2 protein yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 15.815 15.306 3 0.001112 19051 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 66.498 53.49 265220000 0 170780000 2817000 5108600 3425100 6661400 5613500 4764000 3458600 11777000 4617000 7943200 12866000 10209000 15172000 2408 4236 2203 20593;20594;20595;20596;20597;20598;20599;20600;20601;20602;20603;20604;20605;20606;20607 16378;16379;16380;16381;16382;16383;16384;16385;16386 16384 8 AIEPNDYTGK Unmodified 1106.5244 0.52440364 476 O75223 GGCT Gamma-glutamylcyclotransferase yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 32.488 27.244 2 0.0028756 35570 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.802 64.994 316880000 20561000 296320000 0 0 0 0 0 0 0 0 0 0 0 0 0 2409 476 2204 20608;20609;20610 16387;16388;16389;16390 16387 4 AIEPPPLDAVIEAEHTLR Unmodified 1970.0473 0.047291129 2152 Q08211 DHX9 ATP-dependent RNA helicase A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 90.003 90.136 3 0.0045275 104356 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 34.202 29.11 15491000 0 0 0 0 0 1296500 0 0 900340 3245300 1412500 0 0 1554700 7081800 2410 2152 2205 20611;20612;20613;20614;20615;20616 16391;16392 16392 2 AIEPPPLDAVIEAEHTLRELDALDANDELTPLGR Unmodified 3692.8897 0.88973444 2152 Q08211 DHX9 ATP-dependent RNA helicase A yes yes 0 0 1 By MS/MS 2 0 1 1 102.12 93.992 4 4.6307E-62 120953 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 100.57 95.085 18980000 18980000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2411 2152 2206 20617 16393 16393 1 AIEQADLLQEEDESPR Unmodified 1841.8643 0.86430096 1866 P61966 AP1S1 AP-1 complex subunit sigma-1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 62.935 62.986 2 1.1851E-28 71279 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 140.82 130.98 77346000 0 0 0 5303600 4606700 7484700 6372600 5571800 0 9737600 8808300 0 6233900 8636500 14591000 2412 1866 2207 20618;20619;20620;20621;20622;20623;20624;20625;20626;20627 16394;16395;16396;16397;16398;16399;16400;16401;16402;16403;16404 16397 11 AIEQADLLQEEDESPRSVLEEMGLA Unmodified 2771.3171 0.31711956 1866 P61966 AP1S1 AP-1 complex subunit sigma-1A yes yes 0 0 1 By MS/MS 2 0 1 1 98.039 89.908 3 0.00014545 116052 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 31.954 29.126 23881000 23881000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2413 1866 2208 20628 16405;16406 16406 2 AIESMEQQLSELK Oxidation (M) 1520.7392 0.73922379 965 P12270 TPR Nucleoprotein TPR yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 1 2 2 2 53.49 53.607 2 8.1147E-14 59851 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 141.95 120.49 253250000 0 0 0 13689000 14978000 28934000 24764000 13761000 16825000 30110000 23825000 11879000 29368000 20841000 24280000 2414 965 2209 20629;20630;20631;20632;20633;20634;20635;20636;20637;20638;20639;20640;20641;20642;20643;20644;20645;20646;20647;20648;20649;20650;20651 16407;16408;16409;16410;16411;16412;16413;16414;16415;16416;16417;16418;16419;16420;16421;16422;16423;16424;16425;16426;16427 16409 1261 21 AIESMEQQLSELK Unmodified 1504.7443 0.74430917 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 76.644 75.996 2 3.5341E-35 87055 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 210.27 184.29 190870000 0 24125000 0 0 0 0 0 0 13326000 0 35390000 53750000 32112000 32168000 0 2415 965 2209 20652;20653;20654;20655;20656;20657 16428;16429;16430;16431;16432;16433 16431 3 AIESMEQQLSELKK Unmodified 1632.8393 0.83927219 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 1 By matching By matching By matching By MS/MS By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 67.295 67.558 3 0.031472 77356 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 24.697 16.098 36809000 0 0 0 0 0 0 3250800 0 0 4451800 5817300 9162500 3397200 2715700 8014100 2416 965 2210 20658;20659;20660;20661;20662;20663;20664 16434 16434 1 AIETALDCLK Unmodified 1132.5798 0.57981002 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 65.351 64.984 2 0.0017601 74233 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 88.819 69.042 173190000 0 73812000 0 5246800 6687700 6469600 6508500 9785900 7205500 8776000 8822200 10041000 9084600 9465300 11283000 2417 5189 2211 20665;20666;20667;20668;20669;20670;20671;20672;20673;20674;20675;20676;20677 16435;16436;16437;16438;16439;16440;16441;16442;16443;16444;16445;16446 16436 10 AIETLIK Unmodified 786.48511 0.485105 4523 Q9HCY8 S100A14 Protein S100-A14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.505 48.665 2 0.024152 55843 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 83.377 15.344 235490000 0 0 0 72016000 12986000 11876000 11957000 39561000 8267100 14472000 12460000 16204000 16765000 8797800 10123000 2418 4523 2212 20678;20679;20680;20681;20682;20683;20684;20685;20686;20687;20688;20689 16447 16447 1 AIETVYAAYLPK Unmodified 1337.7231 0.72310344 1418 P40692 MLH1 DNA mismatch repair protein Mlh1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 80.938 80.273 2 0.0002655 93012 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 101.65 80.14 283950000 0 83383000 1994000 0 12739000 18394000 11002000 15715000 10597000 26715000 22515000 23323000 9959500 15230000 32386000 2419 1418 2213 20690;20691;20692;20693;20694;20695;20696;20697;20698;20699;20700;20701;20702;20703 16448;16449;16450;16451;16452;16453;16454;16455;16456;16457;16458;16459 16459 12 AIEVGRENREDYR Unmodified 1605.7859 0.78593148 1313 P31948 STIP1 Stress-induced-phosphoprotein 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 1 2 2 2 2 1 2 2 2 2 2 23.061 23.311 3;4 0.0065689 23400 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.412 57.534 386440000 0 0 0 3259300 2498700 10077000 8633400 10992000 4696000 4203200 48076000 61864000 14117000 51800000 166220000 2420 1313 2214 20704;20705;20706;20707;20708;20709;20710;20711;20712;20713;20714;20715;20716;20717;20718;20719;20720;20721;20722;20723;20724 16460;16461;16462;16463;16464 16460 3 AIEVLSDEHAR Unmodified 1238.6255 0.62551466 4521 Q9HCS7 XAB2 Pre-mRNA-splicing factor SYF1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.184 37.363 3 0.019459 39937 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 30.004 22.093 102290000 0 0 0 6746200 5005000 8762400 6310200 5085200 4559200 9995300 6841300 10464000 13071000 7718200 17731000 2421 4521 2215 20725;20726;20727;20728;20729;20730;20731;20732;20733;20734;20735;20736 16465;16466 16465 2 AIFAGYK Unmodified 768.41703 0.41702544 1070 P18077 RPL35A 60S ribosomal protein L35a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.329 43.504 2 0.046463 48042 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 65.897 39.744 423140000 0 0 0 18173000 21838000 26627000 23454000 25613000 24766000 30958000 39996000 55712000 48187000 43614000 64202000 2422 1070 2216 20737;20738;20739;20740;20741;20742;20743;20744;20745;20746;20747;20748 16467 16467 1 AIFLADGK Unmodified 833.4647 0.46470391 4104 Q9BR76 CORO1B Coronin-1B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 48.465 48.61 2 0.020609 54347 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 62.659 24.706 90073000 0 0 0 4414200 4144900 5893500 5499700 6041200 0 6795200 10893000 11051000 0 11861000 23480000 2423 4104 2217 20749;20750;20751;20752;20753;20754;20755;20756;20757;20758 16468;16469;16470;16471 16470 4 AIFMIPTNPPPTFR Oxidation (M) 1616.8385 0.83848433 2250;2227 Q13188;Q13043 STK3;STK4 Serine/threonine-protein kinase 3;Serine/threonine-protein kinase 3 36kDa subunit;Serine/threonine-protein kinase 3 20kDa subunit;Serine/threonine-protein kinase 4;Serine/threonine-protein kinase 4 37kDa subunit;Serine/threonine-protein kinase 4 18kDa subunit no no 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 86.277 86.389 2 0.0054425 99944 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 42.001 32.812 15999000 0 0 0 0 0 3502400 0 0 0 0 0 6044800 0 0 6451700 2424 2250;2227 2218 20759;20760;20761 16472;16473;16474 16472 3617 3 AIFQEVHVQSLPQVDR Unmodified 1864.9795 0.97954591 4001 Q96T76 MMS19 MMS19 nucleotide excision repair protein homolog yes yes 0 0 0 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 76.377 76.557 3 0.00011438 87912 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.226 52.732 22338000 0 0 0 0 0 0 0 0 0 3597400 3321000 0 0 2017500 13402000 2425 4001 2219 20762;20763;20764;20765 16475 16475 1 AIFQTIQNR Unmodified 1089.5931 0.59309232 649 O95373 IPO7 Importin-7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 2 1 1 1 1 1 1 1 1 1 1 51.395 51.736 2 2.1167E-28 58629 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 180.7 121.79 657880000 0 0 0 0 0 99044000 0 0 42402000 66865000 80762000 98693000 76672000 68072000 125370000 2426 649 2220 20766;20767;20768;20769;20770;20771;20772;20773;20774;20775;20776;20777 16476;16477;16478;16479;16480;16481;16482;16483;16484;16485;16486;16487;16488;16489 16477 14 AIFSGISQR Unmodified 977.52943 0.52942943 202 O14686 KMT2D Histone-lysine N-methyltransferase 2D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 52.017 52.387 2 0.018501 58201 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.776 12.302 34544000 0 0 0 0 0 0 0 0 2349700 4680600 4875300 4959400 5096900 5393400 7188500 2427 202 2221 20778;20779;20780;20781;20782;20783;20784 16490;16491;16492 16491 3 AIFTGYYGK Unmodified 1018.5124 0.51238239 888 P09543 CNP 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 2 2 54.045 54.187 2 0.011176 65538 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 63.21 26.235 119280000 0 0 0 5829300 7774200 0 10301000 10745000 6135100 9375700 12576000 0 7311200 22983000 26250000 2428 888 2222 20785;20786;20787;20788;20789;20790;20791;20792;20793;20794;20795;20796 16493;16494;16495;16496;16497;16498 16497 6 AIGAVPLIQGEYMIPCEK Oxidation (M) 2004.006 0.0060199404 839 P07339 CTSD Cathepsin D;Cathepsin D light chain;Cathepsin D heavy chain yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 84.882 84.49 2;3 6.0457E-11 97738 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.845 73.577 112080000 0 35140000 0 17377000 4624000 0 0 5648800 4530600 6802800 10667000 6821800 5431000 5424500 9609600 2429 839 2223 20797;20798;20799;20800;20801;20802;20803;20804;20805;20806;20807;20808 16499;16500;16501;16502;16503;16504;16505;16506;16507 16502 1028 9 AIGAVPLIQGEYMIPCEK Unmodified 1988.0111 0.011105318 839 P07339 CTSD Cathepsin D;Cathepsin D light chain;Cathepsin D heavy chain yes yes 0 0 0 By MS/MS 2 0 1 1 93.231 88.32 2 8.2271E-36 109689 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.71 112.82 59450000 0 59450000 0 0 0 0 0 0 0 0 0 0 0 0 0 2430 839 2223 20809 16508 16508 1 AIGGEFSDTNAAVEGTPLPK Unmodified 1972.9742 0.97418577 495 O75410 TACC1 Transforming acidic coiled-coil-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 77.959 73.183 2 2.6545E-71 91281 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.1 126.42 22240000 0 22240000 0 0 0 0 0 0 0 0 0 0 0 0 0 2431 495 2224 20810 16509 16509 1 AIGGGLSSVGGGSSTIK Unmodified 1446.7678 0.7678218 58 CON__P02538;P02538 KRT6A Keratin, type II cytoskeletal 6A no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.667 51.816 2 7.1024E-37 59016 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 170.95 133.76 + 1665600000 0 0 0 174020000 67699000 41963000 125130000 200300000 36744000 96145000 55412000 102630000 654430000 68407000 42676000 2432 58 2225 20811;20812;20813;20814;20815;20816;20817;20818;20819;20820;20821;20822 16510;16511;16512;16513;16514;16515;16516;16517;16518;16519;16520;16521;16522;16523;16524;16525;16526;16527 16517 18 AIGNEVTVDK Unmodified 1044.5451 0.54513908 2226 Q13042 CDC16 Cell division cycle protein 16 homolog yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 30.006 30.18 2 0.010493 33100 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 55.908 28.204 77596000 0 0 0 0 6299100 12965000 0 6499000 4881200 14003000 12376000 0 0 0 20572000 2433 2226 2226 20823;20824;20825;20826;20827;20828;20829 16528;16529;16530;16531 16528 4 AIGNNSATSPR Unmodified 1086.5418 0.54178503 4743 Q9NYJ8 TAB2 TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 11.668 11.753 2 0.0013675 10808 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 73.233 48.339 24745000 0 0 0 2208000 2080200 2546000 2123300 2392700 2903900 3441200 0 0 0 3161900 3887500 2434 4743 2227 20830;20831;20832;20833;20834;20835;20836;20837;20838;20839 16532;16533;16534;16535;16536;16537;16538;16539;16540 16533 7 AIGNTELENK Unmodified 1087.551 0.55095274 1451 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 24.524 24.988 2 0.0019022 25933 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 100.02 53.591 116520000 0 0 0 0 0 0 0 0 0 20811000 13524000 29193000 0 18461000 34534000 2435 1451 2228 20840;20841;20842;20843;20844;20845;20846;20847;20848 16541;16542;16543;16544;16545;16546;16547;16548;16549;16550 16549 9 AIGPHDVLATLLNNLK Unmodified 1687.9621 0.96210494 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 0 By MS/MS 3 0 1 1 99.091 95.74 3 0.0012071 114819 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 44.807 33.367 1926600 0 1926600 0 0 0 0 0 0 0 0 0 0 0 0 0 2436 516 2229 20849 16551 16551 1 AIGQAPSNLTMNPSNFATPQTHK Oxidation (M) 2440.1805 0.18050692 2433 Q14686 NCOA6 Nuclear receptor coactivator 6 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 60.959 61.22 3 1.4465E-10 70303 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 66.383 52.791 83156000 0 0 0 0 0 9422700 9818200 7406400 7098000 0 9550400 10957000 12892000 0 16011000 2437 2433 2230 20850;20851;20852;20853;20854;20855;20856;20857 16552;16553;16554;16555;16556;16557;16558;16559;16560 16559 4001 9 AIGQAPSNLTMNPSNFATPQTHK Unmodified 2424.1856 0.1855923 2433 Q14686 NCOA6 Nuclear receptor coactivator 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 72.566 72.749 3 3.5864E-10 83225 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.833 59.375 75922000 0 0 0 0 0 0 0 5771700 0 10006000 0 0 11205000 12297000 36641000 2438 2433 2230 20858;20859;20860;20861;20862 16561;16562;16563;16564;16565;16566;16567;16568 16561 8 AIGQTELNASNPEEVLQLAAQR Unmodified 2351.2081 0.20810188 3034 Q75QN2 INTS8 Integrator complex subunit 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 87.687 87.829 3 0.00014949 101834 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 42.639 39.352 24667000 0 0 0 0 0 2109100 0 1533000 1695400 3573000 2599100 3693300 0 2350400 7113800 2439 3034 2231 20863;20864;20865;20866;20867;20868;20869;20870 16569;16570;16571;16572 16569 4 AIGSASEGAQSSLQEVYHK Unmodified 1960.949 0.94903365 1228 P28066 PSMA5 Proteasome subunit alpha type-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.75 3.51 5 2 17 2 4 1 2 1 1 1 1 1 1 2 2 2 2 1 53.73 52.447 2;3 9.8844E-159 58818 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 164.53 155.87 1516400000 29625000 615830000 27238000 55902000 33233000 43527000 43424000 59883000 22960000 59724000 110610000 88260000 47207000 73035000 205910000 2440 1228 2232 20871;20872;20873;20874;20875;20876;20877;20878;20879;20880;20881;20882;20883;20884;20885;20886;20887;20888;20889;20890;20891;20892;20893;20894 16573;16574;16575;16576;16577;16578;16579;16580;16581;16582;16583;16584;16585;16586;16587;16588;16589;16590;16591;16592;16593;16594;16595;16596;16597;16598;16599;16600;16601;16602;16603 16582 31 AIGSLAVGHLTK Unmodified 1165.6819 0.68190733 3158 Q86UW9 DTX2 Probable E3 ubiquitin-protein ligase DTX2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 2 2 2 2 2 2 2 2 2 1 52.376 52.473 2;3 0.0029412 60215 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 56.951 36.081 478400000 0 0 0 24803000 44288000 57851000 32752000 35639000 32333000 69963000 76676000 98558000 0 0 5531500 2441 3158 2233 20895;20896;20897;20898;20899;20900;20901;20902;20903;20904;20905;20906;20907;20908;20909;20910;20911;20912;20913 16604;16605;16606;16607;16608;16609;16610;16611 16610 2 AIGTEPDSDVLSEIMHSFAK Oxidation (M) 2162.0201 0.02014968 149 O00410 IPO5 Importin-5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 4.83 3.67 3 1 2 3 1 1 1 91.712 89.177 3 6.0251E-18 110926 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.17 89.338 381600000 0 347070000 17415000 0 0 0 0 0 0 0 0 0 0 2670100 14449000 2442 149 2234 20914;20915;20916;20917;20918;20919 16612;16613;16614;16615;16616 16612 197 3 AIGTEPDSDVLSEIMHSFAK Unmodified 2146.0252 0.025235058 149 O00410 IPO5 Importin-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 6 2 4 3 1 99.003 93.609 2;3;4 5.0176E-72 118297 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 142.58 128.54 1096800000 406120000 682320000 8404100 0 0 0 0 0 0 0 0 0 0 0 0 2443 149 2234 20920;20921;20922;20923;20924;20925;20926;20927 16617;16618;16619;16620;16621;16622;16623;16624;16625;16626 16618 9 AIGTEPDTDVLSEIMNSFAK Unmodified 2137.0249 0.024900707 409 O60518 RANBP6 Ran-binding protein 6 yes yes 0 0 0 By MS/MS 2 0 1 1 101.52 96.804 2 0.006322 119647 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.244 56.874 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2444 409 2235 20928 16627 16627 1 AIGTLIVTK Unmodified 914.58007 0.58006802 1146 P22735 TGM1 Protein-glutamine gamma-glutamyltransferase K yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.384 56.509 2 0.042168 64062 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 43.982 18.892 401730000 0 0 0 135890000 16562000 18807000 21123000 54396000 10706000 32480000 24931000 31149000 31677000 13073000 10933000 2445 1146 2236 20929;20930;20931;20932;20933;20934;20935;20936;20937;20938;20939;20940 16628 16628 1 AIGVLTSGGDAQGMNAAVR Oxidation (M) 1802.8945 0.89449566 2064;1063 P17858;Q01813 PFKL;PFKP ATP-dependent 6-phosphofructokinase, liver type;ATP-dependent 6-phosphofructokinase, platelet type no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 53.213 53.355 2 1.9052E-65 59755 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 163.51 129.62 403360000 0 0 0 23299000 35927000 40367000 35046000 31887000 19972000 37135000 42315000 45177000 35870000 20834000 35530000 2446 1063;2064 2237 20941;20942;20943;20944;20945;20946;20947;20948;20949;20950;20951;20952 16629;16630;16631;16632;16633;16634;16635;16636;16637;16638;16639;16640;16641;16642;16643;16644;16645 16643 1492 17 AIGVLTSGGDAQGMNAAVR Unmodified 1786.8996 0.89958103 2064;1063 P17858;Q01813 PFKL;PFKP ATP-dependent 6-phosphofructokinase, liver type;ATP-dependent 6-phosphofructokinase, platelet type no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 1 2 2 1 2 2 2 1 2 2 66.525 66.61 2;3 1.344E-198 76211 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 223.31 199.46 695670000 0 0 0 33744000 52165000 39963000 47397000 66150000 19514000 59788000 80106000 67961000 39322000 60364000 129200000 2447 1063;2064 2237 20953;20954;20955;20956;20957;20958;20959;20960;20961;20962;20963;20964;20965;20966;20967;20968;20969;20970;20971;20972;20973 16646;16647;16648;16649;16650;16651;16652;16653;16654;16655;16656;16657;16658;16659;16660;16661;16662;16663;16664;16665 16655 16 AIGYLNTGYQR Unmodified 1254.6357 0.63568542 740 P01023 A2M Alpha-2-macroglobulin yes yes 0 0 0 By MS/MS 10 0 1 1 52.458 52.622 2 0.00028316 59576 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 90.601 57.788 7746100 0 0 0 0 0 0 0 7746100 0 0 0 0 0 0 0 2448 740 2238 20974 16666 16666 1 AIHEFLAAQK Unmodified 1126.6135 0.61349341 3879 Q96IK1 BOD1 Biorientation of chromosomes in cell division protein 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 39.091 39.698 2 0.0099821 43395 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 56.81 42.653 10756000 0 0 0 0 0 0 0 0 0 0 3402000 7353700 0 0 0 2449 3879 2239 20975;20976 16667;16668 16668 1 AIHNIFR Unmodified 869.48717 0.48717069 4965;3429 Q9UKG1;Q8NEU8 APPL1;APPL2 DCC-interacting protein 13-alpha;DCC-interacting protein 13-beta no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 35.598 35.842 2 0.027168 39620 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 77.748 21.238 11742000 0 0 0 0 0 3362900 0 2882900 0 0 3140800 0 2355400 0 0 2450 4965;3429 2240 20977;20978;20979;20980 16669 16669 1 AIHPGAGYEGISEYK Unmodified 1590.7678 0.7678218 4433 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 2 1 1 1 1 1 1 1 1 1 1 1 2 49.918 48.657 2;3 5.8284E-16 67236 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 115.8 101.77 365940000 127130000 64821000 0 0 8565800 23927000 9307600 9941600 12910000 13210000 14148000 19683000 14733000 17764000 29792000 2451 4433 2241 20981;20982;20983;20984;20985;20986;20987;20988;20989;20990;20991;20992;20993;20994;20995 16670;16671;16672;16673;16674;16675;16676;16677;16678;16679 16675 9 AIHQEEVK Unmodified 952.49779 0.49779495 3242 Q8IWJ2 GCC2 GRIP and coiled-coil domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 8.1218 5.3808 2 0.0025405 8006 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.31 70.415 33575000 0 26252000 7322400 0 0 0 0 0 0 0 0 0 0 0 0 2452 3242 2242 20996;20997 16680 16680 1 AIHQQILLLR Unmodified 1203.7452 0.74517629 398 O60343 TBC1D4 TBC1 domain family member 4 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 63.459 63.789 3 0.0040285 72118 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.347 55.342 25038000 0 0 0 0 0 7965100 0 0 0 0 0 5348400 0 0 11725000 2453 398 2243 20998;20999;21000 16681;16682 16682 2 AIHSWLTR Unmodified 982.53485 0.53484916 1229 P28070 PSMB4 Proteasome subunit beta type-4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 42.862 43.093 2 0.017656 46801 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.313 40.681 33013000 0 0 0 4067000 0 0 0 0 0 0 6085300 0 0 3928900 18931000 2454 1229 2244 21001;21002;21003;21004 16683;16684 16683 2 AIIDEFEQK Unmodified 1091.5499 0.5498901 2476 Q15021 NCAPD2 Condensin complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 2 1 6 1 1 1 1 1 1 1 1 1 66.337 60.312 2 4.2447E-05 74205 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 159.04 112.61 33253000 24153000 0 9099200 0 0 0 0 0 0 0 0 0 0 0 0 2455 2476 2245 21005;21006;21007;21008;21009;21010;21011;21012;21013 16685;16686;16687;16688;16689;16690;16691;16692 16688 8 AIIEEYLHLNDMK Oxidation (M) 1603.7916 0.79159371 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 3 15 2 1 2 2 1 2 2 2 1 3 78.875 77.765 2;3 6.7325E-13 89421 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 127.87 102.48 407530000 107350000 36878000 0 0 0 38960000 15256000 0 5295500 37923000 26637000 35596000 0 7095900 96534000 2456 2102 2246 21014;21015;21016;21017;21018;21019;21020;21021;21022;21023;21024;21025;21026;21027;21028;21029;21030;21031 16693;16694;16695;16696;16697;16698;16699;16700;16701;16702;16703;16704;16705 16698 3398 13 AIIEEYLHLNDMK Unmodified 1587.7967 0.79667909 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 84.165 82.117 3 0.00056041 104208 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.087 77.602 132170000 44490000 72917000 0 0 0 0 0 1839900 0 1604000 1198700 0 0 0 10117000 2457 2102 2246 21032;21033;21034;21035;21036;21037 16706;16707;16708 16706 3 AIIIFVPVPQLK Unmodified 1336.8482 0.84824438 1871 P62081 RPS7 40S ribosomal protein S7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 96.778 94.832 2 0.0012507 111507 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.423 60.891 12163000 7465000 0 0 0 0 878280 0 0 771880 0 0 0 0 0 3047500 2458 1871 2247 21038;21039;21040;21041 16709;16710;16711 16709 3 AIILAAAPGEK Unmodified 1052.623 0.62299547 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.148 55.279 2 0.0016293 61634 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 71.451 58.923 273790000 0 0 0 16005000 20286000 19756000 23774000 19853000 17581000 22964000 27320000 30382000 18436000 20311000 37127000 2459 1201 2248 21042;21043;21044;21045;21046;21047;21048;21049;21050;21051;21052;21053 16712;16713;16714;16715;16716;16717;16718;16719;16720;16721;16722;16723 16719 11 AIILFNPDAK Unmodified 1100.623 0.62299547 1237 P28702 RXRB Retinoic acid receptor RXR-beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.623 76.683 2 0.010798 88987 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 55.37 30.447 199860000 0 0 0 11570000 12911000 17713000 11456000 13620000 8344300 14030000 10847000 17053000 19788000 24355000 38169000 2460 1237 2249 21054;21055;21056;21057;21058;21059;21060;21061;21062;21063;21064;21065 16724;16725;16726;16727 16726 2 AIILNTPHNPLGK Unmodified 1386.7983 0.79833407 2998 Q6YP21 CCBL2 Kynurenine--oxoglutarate transaminase 3 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching 8.4 3.2 1 4 1 1 1 1 1 66.566 65.242 3 0.002144 87583 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.401 54.805 48881000 31750000 0 0 0 0 0 0 1518000 0 0 8927900 3468200 0 0 3217000 2461 2998 2250 21066;21067;21068;21069;21070 16728;16729 16728 2 AIIRENEFSFEDNAIK Unmodified 1894.9425 0.94249171 2201 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 74.302 74.46 3 0.00021428 85874 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 66.965 45.732 46813000 0 0 0 0 0 4583900 0 3908400 5715100 7245200 4361900 0 6206700 0 14792000 2462 2201 2251 21071;21072;21073;21074;21075;21076;21077 16730;16731;16732;16733 16731 4 AIIRENEFSFEDNAIR Unmodified 1922.9486 0.94863972 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 74.928 75.088 3 0.00059692 86528 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 56.851 50.729 36179000 0 0 0 0 0 6980600 0 0 5288600 4471600 0 6811100 0 0 12627000 2463 2451 2252 21078;21079;21080;21081;21082 16734;16735;16736 16734 3 AIIRENEFSFEDNAIRGGK Unmodified 2165.0865 0.086530182 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 0 2 By MS/MS 10 0 2 2 68.49 68.984 3;4 0.00023843 78624 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.253 49.253 12084000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12084000 2464 2451 2253 21083;21084 16737;16738 16737 2 AIITALGVER Unmodified 1041.6182 0.61824444 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.013 67.097 2 0.010295 76931 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 56.258 17.466 128150000 0 0 0 5683400 7778700 8604200 8686900 8742400 5583400 11892000 10752000 15383000 9848600 10372000 24822000 2465 3641 2254 21085;21086;21087;21088;21089;21090;21091;21092;21093;21094;21095;21096 16739;16740;16741;16742;16743;16744;16745 16739 7 AIITALGVERR Unmodified 1197.7194 0.71935547 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 56.039 56.154 3 0.0017098 63611 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 46.844 6.1289 88500000 0 0 0 7003800 5856900 9129000 9530500 9018100 6789200 8804100 6821400 6564800 0 9043700 9938700 2466 3641 2255 21097;21098;21099;21100;21101;21102;21103;21104;21105;21106;21107 16746;16747;16748;16749;16750;16751;16752 16750 5 AIITDSVK Unmodified 845.48583 0.48583328 3946 Q96P70 IPO9 Importin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.64 2.9 1 1 9 1 1 1 1 1 1 1 1 1 1 1 34.526 33.676 2 0.028761 37013 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 56.547 15.045 1033300000 1901700 851360000 0 12376000 14505000 33888000 16665000 14550000 8570400 33182000 27221000 19127000 0 0 0 2467 3946 2256 21108;21109;21110;21111;21112;21113;21114;21115;21116;21117;21118 16753;16754;16755;16756 16756 4 AILCAIQNLEERK Unmodified 1556.8345 0.83446158 4641 Q9NU22 MDN1 Midasin yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 74.171 74.334 3 0.017904 85201 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 23.722 10.955 9427000 0 0 0 0 0 1318500 0 0 0 0 0 0 0 0 8108500 2468 4641 2257 21119;21120 16757 16757 1 AILEFAEK Unmodified 919.50148 0.50148335 1479 P43378 PTPN9 Tyrosine-protein phosphatase non-receptor type 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.695 60.8 2 0.012186 69446 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 75.213 50.581 100800000 0 0 0 5346300 4966100 8471100 6411700 7270500 6496500 10680000 11119000 12884000 9259300 8058600 9838800 2469 1479 2258 21121;21122;21123;21124;21125;21126;21127;21128;21129;21130;21131;21132 16758;16759;16760;16761;16762;16763;16764 16758 7 AILEQNFR Unmodified 989.52943 0.52942943 2370 Q14134 TRIM29 Tripartite motif-containing protein 29 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 48.317 48.426 2 0.0043036 54604 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 111.73 70.875 268110000 0 0 0 40259000 11359000 15184000 18111000 27237000 13803000 23903000 28876000 0 30250000 21831000 37297000 2470 2370 2259 21133;21134;21135;21136;21137;21138;21139;21140;21141;21142;21143 16765;16766;16767;16768;16769;16770;16771;16772;16773 16771 6 AILEQQVLSEELTTK Unmodified 1700.9196 0.919631 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 7.44 3.62 2 1 6 2 1 1 1 1 1 1 1 81.035 79.96 2 2.8604E-80 99135 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 202.18 186.64 133060000 0 115980000 2365400 0 0 2551300 2111500 1527500 0 0 2290200 4376500 0 1862500 0 2471 5049 2260 21144;21145;21146;21147;21148;21149;21150;21151;21152 16774;16775;16776;16777 16775 4 AILGSVER Unmodified 843.48142 0.48141661 1209;12 P26639;A2RTX5 TARS;TARSL2 Threonine--tRNA ligase, cytoplasmic;Probable threonine--tRNA ligase 2, cytoplasmic no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 16 2 1 2 1 1 1 1 1 1 2 1 2 37.447 37.621 2 0.0068357 41494 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 94.662 11.434 534740000 0 0 0 34898000 7705400 47574000 9843500 9614400 4103300 12687000 60547000 72700000 59409000 35726000 179930000 2472 1209;12 2261 21153;21154;21155;21156;21157;21158;21159;21160;21161;21162;21163;21164;21165;21166;21167;21168 16778;16779;16780 16779 3 AILGSYDSELTPAEYSPQLTR Unmodified 2310.138 0.13795663 5278 Q9Y6D9 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 2 2 1 1 1 1 2 83.149 83.275 2;3 2.779E-06 96099 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.95 58.194 108710000 0 0 0 0 1927600 3293300 1642600 9094800 8917000 16106000 15921000 9650500 0 10310000 31848000 2473 5278 2262 21169;21170;21171;21172;21173;21174;21175;21176;21177;21178;21179;21180;21181 16781;16782;16783;16784;16785;16786;16787;16788;16789;16790 16783 10 AILGSYDSELTPAEYSPQLTRR Unmodified 2466.2391 0.23906766 5278 Q9Y6D9 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes yes 0 0 1 By MS/MS 10 0 1 1 79.18 79.426 3 1.9663E-05 91393 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.814 34.493 32911000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32911000 2474 5278 2263 21182 16791;16792 16791 2 AILHSIDCCSSDDTK Unmodified 1720.7396 0.7396345 4464 Q9H981 ACTR8 Actin-related protein 8 yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 41.992 37.771 3 0.012068 47577 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 26.771 21.89 4820300 0 2366800 2453500 0 0 0 0 0 0 0 0 0 0 0 0 2475 4464 2264 21183;21184 16793;16794 16794 2 AILILDNDGDR Unmodified 1213.6303 0.63026569 1861 P61923 COPZ1 Coatomer subunit zeta-1 yes yes 0 0 0 By MS/MS 10 0 1 1 66.545 66.689 2 0.030619 76772 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 54.066 32.538 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2476 1861 2265 21185 16795 16795 1 AILILDNDGDRLFAK Unmodified 1672.9148 0.91482039 1861 P61923 COPZ1 Coatomer subunit zeta-1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 83.278 82.554 3 4.6344E-11 95262 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.877 53.94 71159000 24616000 0 0 917430 0 0 929180 3145400 3296800 0 1949000 3274900 3444200 2992200 26594000 2477 1861 2266 21186;21187;21188;21189;21190;21191;21192;21193;21194;21195 16796;16797 16796 1 AILLENDLSTENK Unmodified 1458.7566 0.75658842 2972 Q6UB99 ANKRD11 Ankyrin repeat domain-containing protein 11 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 51.455 51.705 2 0.011884 58560 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 42.395 6.0611 36701000 0 0 0 0 0 0 0 15883000 4917500 0 15900000 0 0 0 0 2478 2972 2267 21196;21197;21198 16798 16798 1 AILNGIDSINK Unmodified 1156.6452 0.64518747 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 65.171 63.833 2 0.00030194 72835 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 94.309 67.347 483820000 11830000 286050000 7124900 9092900 8599900 15400000 11482000 12785000 7830900 21607000 18883000 21564000 12948000 12436000 26193000 2479 5071 2268 21199;21200;21201;21202;21203;21204;21205;21206;21207;21208;21209;21210;21211;21212;21213;21214 16799;16800;16801;16802;16803;16804;16805;16806;16807;16808;16809;16810;16811;16812 16807 14 AILPCIK Unmodified 813.47825 0.47824549 1816 P60842 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 60.049 60.213 2 0.044016 68892 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.994 0 1121000000 0 0 0 2702500 0 149810000 65598000 47609000 50850000 116080000 134670000 131190000 95221000 110230000 217070000 2480 1816 2269 21215;21216;21217;21218;21219;21220;21221;21222;21223;21224;21225 16813;16814;16815 16813 3 AILPCQDTPSVK Unmodified 1327.6806 0.6805867 896 P09960 LTA4H Leukotriene A-4 hydrolase yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 58.37 52.539 2 0.0070813 67803 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.893 54.686 51501000 0 51501000 0 0 0 0 0 0 0 0 0 0 0 0 0 2481 896 2270 21226;21227 16816;16817;16818 16817 3 AILQATLREEK Unmodified 1270.7245 0.72450043 2205 Q12904 AIMP1 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1;Endothelial monocyte-activating polypeptide 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.16 2.46 2 17 2 1 2 2 1 2 2 2 2 1 2 44.638 44.05 2;3 0.00028073 47599 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.014 68.587 673120000 313300000 0 0 0 9425900 23883000 21290000 0 17423000 30435000 45200000 68448000 26264000 13061000 104390000 2482 2205 2271 21228;21229;21230;21231;21232;21233;21234;21235;21236;21237;21238;21239;21240;21241;21242;21243;21244;21245;21246 16819;16820;16821;16822;16823;16824;16825;16826;16827;16828;16829;16830;16831;16832;16833;16834;16835 16824 16 AILQNHTDFK Unmodified 1185.6142 0.6142217 3190 Q86X55 CARM1 Histone-arginine methyltransferase CARM1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 2 1 2 2 2 2 1 2 2 2 1 35.565 35.746 2;3 0.012128 38508 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.028 38.14 432120000 0 0 0 16569000 16918000 33693000 29344000 33971000 25267000 36177000 29080000 46527000 53082000 44504000 66990000 2483 3190 2272 21247;21248;21249;21250;21251;21252;21253;21254;21255;21256;21257;21258;21259;21260;21261;21262;21263;21264;21265;21266 16836;16837;16838;16839;16840 16840 3 AILSNEATK Unmodified 945.51311 0.51311067 3 A0AVT1 UBA6 Ubiquitin-like modifier-activating enzyme 6 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS 7.7 3.52 2 1 7 2 1 1 1 1 1 1 1 1 23.36 22.438 2 0.0074224 27644 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 95.909 63.974 419120000 0 347020000 4013600 4673300 0 7566700 0 0 0 9110200 10043000 10113000 7787500 0 18795000 2484 3 2273 21267;21268;21269;21270;21271;21272;21273;21274;21275;21276 16841;16842;16843;16844;16845 16843 5 AILSTKPPGTFLLR Unmodified 1512.9028 0.90279914 1419 P40763 STAT3 Signal transducer and activator of transcription 3 yes yes 0 0 1 By MS/MS 10 0 1 1 78.618 78.864 3 0.0021037 90646 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.457 35.406 14887000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14887000 2485 1419 2274 21277 16846 16846 1 AILTESENK Unmodified 1003.5186 0.51858998 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.828 22.039 2 0.006387 23095 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 75.213 41.774 142340000 0 0 0 7947400 6125700 11611000 11079000 11026000 0 14397000 13038000 13644000 20924000 10711000 21837000 2486 2291 2275 21278;21279;21280;21281;21282;21283;21284;21285;21286;21287;21288;21289 16847;16848;16849;16850;16851;16852;16853 16848 7 AILTMTQLYK Unmodified 1180.6526 0.65258104 3663 Q92797 SYMPK Symplekin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.723 76.819 2 0.0032116 88125 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.318 45.19 47124000 0 0 0 1474900 0 4306900 2330800 3867700 2215600 4445900 3999000 4929200 3419900 4204600 11930000 2487 3663 2276 21290;21291;21292;21293;21294;21295;21296;21297;21298;21299;21300 16854;16855;16856;16857;16858;16859 16856 6 AILVDLEPGTMDSVR Oxidation (M) 1630.8236 0.82362212 842;2350;4182;2306 P07437;Q13509;Q13885;Q9BVA1 TUBB;TUBB3;TUBB2A;TUBB2B Tubulin beta chain;Tubulin beta-3 chain;Tubulin beta-2A chain;Tubulin beta-2B chain no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.44 2.04 3 40 1 1 1 3 1 3 4 4 4 3 4 3 4 3 4 77.842 77.928 2;3 3.3724E-27 88721 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 133.05 98.295 37841000000 4814000 2959500 1566700 1733200000 2030800000 2499600000 2976600000 2382000000 2661800000 3760400000 4413300000 5474300000 2912200000 3412800000 3574300000 2488 842;2306;2350;4182 2277 21301;21302;21303;21304;21305;21306;21307;21308;21309;21310;21311;21312;21313;21314;21315;21316;21317;21318;21319;21320;21321;21322;21323;21324;21325;21326;21327;21328;21329;21330;21331;21332;21333;21334;21335;21336;21337;21338;21339;21340;21341;21342;21343 16860;16861;16862;16863;16864;16865;16866;16867;16868;16869;16870;16871;16872;16873;16874;16875;16876;16877;16878;16879;16880;16881;16882;16883;16884;16885;16886;16887;16888;16889;16890;16891;16892;16893;16894;16895;16896;16897;16898;16899;16900;16901;16902;16903;16904;16905 16879 1037 40 AILVDLEPGTMDSVR Unmodified 1614.8287 0.8287075 842;2350;4182;2306 P07437;Q13509;Q13885;Q9BVA1 TUBB;TUBB3;TUBB2A;TUBB2B Tubulin beta chain;Tubulin beta-3 chain;Tubulin beta-2A chain;Tubulin beta-2B chain no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 36 2 3 2 3 3 2 3 3 4 4 4 3 82.709 82.786 2;3 3.2965E-27 95590 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 172.17 137.29 11855000000 0 0 0 175170000 497310000 787590000 470240000 953950000 663250000 1144100000 1399200000 1207500000 747340000 1194800000 2614900000 2489 842;2306;2350;4182 2277 21344;21345;21346;21347;21348;21349;21350;21351;21352;21353;21354;21355;21356;21357;21358;21359;21360;21361;21362;21363;21364;21365;21366;21367;21368;21369;21370;21371;21372;21373;21374;21375;21376;21377;21378;21379 16906;16907;16908;16909;16910;16911;16912;16913;16914;16915;16916;16917;16918;16919;16920;16921;16922;16923;16924;16925;16926;16927;16928;16929;16930;16931;16932;16933;16934;16935;16936;16937;16938;16939;16940 16916 29 AILVLLSK Unmodified 855.57934 0.57933974 1142 P22670 RFX1 MHC class II regulatory factor RFX1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 77.908 77.987 2 0.049549 90149 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 47.082 34.045 24864000 0 0 0 0 1556400 4753100 1694400 1897200 3490700 4268600 2061500 0 2523500 2618300 0 2490 1142 2278 21380;21381;21382;21383;21384;21385;21386;21387;21388 16941 16941 1 AILVVFANK Unmodified 973.59605 0.59605244 1416 P40616 ARL1 ADP-ribosylation factor-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 8.47 3.07 2 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77.23 76.34 2 0.0032858 88546 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 93.262 44.759 894930000 4348300 5684100 3561900 47730000 41672000 69629000 77751000 68168000 77376000 85521000 68217000 122160000 57494000 55984000 109630000 2491 1416 2279 21389;21390;21391;21392;21393;21394;21395;21396;21397;21398;21399;21400;21401;21402;21403 16942;16943;16944;16945;16946;16947;16948;16949;16950;16951;16952;16953;16954;16955;16956;16957 16955 15 AIMAQLPQEQK Oxidation (M) 1271.6544 0.65437195 1340 P35221 CTNNA1 Catenin alpha-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 40.953 40.343 2 7.303E-108 44899 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 214.96 192.18 308100000 0 37275000 0 20045000 20398000 26323000 0 15348000 16755000 28782000 32275000 32346000 30546000 21006000 27005000 2492 1340 2280 21404;21405;21406;21407;21408;21409;21410;21411;21412;21413;21414;21415;21416 16958;16959;16960;16961;16962;16963;16964;16965;16966;16967;16968;16969;16970;16971;16972 16965 2025 14 AIMAQLPQEQK Unmodified 1255.6595 0.65945733 1340 P35221 CTNNA1 Catenin alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 51.728 50.932 2 8.526E-49 57641 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 191.17 165.44 455150000 0 227900000 0 18485000 28582000 41959000 30493000 39088000 34902000 33742000 0 0 0 0 0 2493 1340 2280 21417;21418;21419;21420;21421;21422;21423;21424;21425 16973;16974;16975;16976;16977;16978;16979;16980;16981;16982;16983;16984;16985;16986 16976 14 AIMEMPSFYSHGLPR 2 Oxidation (M) 1766.812 0.81201158 1766 P55265 ADAR Double-stranded RNA-specific adenosine deaminase yes yes 0 2 0 By MS/MS 10 0 1 1 60.693 61.28 3 0.0034449 69247 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.941 36.473 5577800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5577800 2494 1766 2281 21426 16987 16987 2881;2882 0 AIMTYVSSFYHAFSGAQK Unmodified 2006.956 0.95603328 356;971 O43707;P12814 ACTN4;ACTN1 Alpha-actinin-4;Alpha-actinin-1 no no 0 0 0 By MS/MS 2.5 0.5 1 1 2 97.008 93.012 3 0.0001804 116195 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.093 50.305 27745000 0 27745000 0 0 0 0 0 0 0 0 0 0 0 0 0 2495 356;971 2282 21427;21428 16988;16989 16988 1 AIMTYVSSFYHAFSGAQK Oxidation (M) 2022.9509 0.9509479 356;971 O43707;P12814 ACTN4;ACTN1 Alpha-actinin-4;Alpha-actinin-1 no no 0 1 0 By MS/MS 2 0 2 2 91.274 83.144 3 6.163E-05 107662 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.82 57.3 27016000 27016000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2496 356;971 2282 21429;21430 16990;16991 16990 446 1 AIMYEETTYSK Oxidation (M) 1350.6013 0.60133333 1694 P52701 MSH6 DNA mismatch repair protein Msh6 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 36.529 36.31 2 0.00017082 39718 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 91.584 84.915 115800000 0 12068000 0 5571400 5741300 10730000 7711400 10295000 6824200 8664300 11179000 11634000 8180800 7393800 9803700 2497 1694 2283 21431;21432;21433;21434;21435;21436;21437;21438;21439;21440;21441;21442;21443 16992;16993;16994;16995;16996;16997;16998;16999;17000;17001;17002;17003;17004 17002 2740 13 AIMYEETTYSK Unmodified 1334.6064 0.60641871 1694 P52701 MSH6 DNA mismatch repair protein Msh6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.43 2.06 1 13 1 2 1 1 1 1 1 1 2 1 1 1 44.417 44.749 2 1.953E-05 49110 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 127.3 117.59 117700000 0 0 0 0 0 10061000 7656200 8201400 0 12819000 18056000 19051000 8780900 7768700 25310000 2498 1694 2283 21444;21445;21446;21447;21448;21449;21450;21451;21452;21453;21454;21455;21456;21457 17005;17006;17007;17008;17009;17010;17011;17012;17013;17014;17015;17016;17017;17018;17019;17020;17021;17022;17023;17024;17025 17012 21 AINFNFGYAK Unmodified 1143.5713 0.57129425 1528 P47897 QARS Glutamine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 76.79 75.798 2 0.004295 96574 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.308 78.898 169310000 45463000 41803000 0 0 3432700 11705000 4668600 7593600 6072200 9009400 9711400 15585000 6225400 8038600 0 2499 1528 2284 21458;21459;21460;21461;21462;21463;21464;21465;21466;21467;21468;21469;21470 17026;17027;17028;17029;17030;17031;17032;17033;17034;17035;17036;17037 17031 12 AINGPTSASGDDISK Unmodified 1431.6842 0.68415175 1645 P51114 FXR1 Fragile X mental retardation syndrome-related protein 1 yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching 10 0 8 1 1 1 1 1 1 1 1 30.609 30.768 2 0.0086539 33535 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 38.445 22.308 22256000 0 0 0 1919900 0 0 2786100 3160900 2146900 3457500 3343000 0 2789900 2652400 0 2500 1645 2285 21471;21472;21473;21474;21475;21476;21477;21478 17038;17039 17038 2 AINNSFAPEK Unmodified 1089.5455 0.54547343 1654 P51530 DNA2 DNA replication ATP-dependent helicase/nuclease DNA2;DNA replication nuclease DNA2;DNA replication ATP-dependent helicase DNA2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 38.403 33.603 2 0.04557 44135 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 53.089 35.724 21117000 0 21117000 0 0 0 0 0 0 0 0 0 0 0 0 0 2501 1654 2286 21479;21480 17040 17040 1 AINNYNPK Unmodified 932.47158 0.4715802 3120 Q7Z739 YTHDF3 YTH domain-containing family protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.624 16.803 2 0.0049782 17098 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 114.54 103.47 664140000 0 0 0 22979000 21968000 33847000 48790000 27549000 43061000 63866000 97581000 58921000 61345000 74590000 109640000 2502 3120 2287 21481;21482;21483;21484;21485;21486;21487;21488;21489;21490;21491;21492 17041;17042;17043;17044;17045;17046;17047;17048;17049;17050;17051;17052 17041 12 AINPINTFTK Unmodified 1117.6132 0.61315906 2146 Q07960 ARHGAP1 Rho GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 66.191 64.865 2 0.0014227 74345 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 106.6 73.049 1077100000 270900000 369730000 7883800 25105000 20864000 54068000 30962000 26092000 16712000 49640000 42482000 36131000 35325000 32860000 58308000 2503 2146 2288 21493;21494;21495;21496;21497;21498;21499;21500;21501;21502;21503;21504;21505;21506;21507;21508 17053;17054;17055;17056;17057;17058;17059;17060;17061;17062;17063;17064;17065;17066;17067;17068;17069 17054 15 AINQAGSRSSEPGK Unmodified 1400.7008 0.70080487 273 O15344 MID1 E3 ubiquitin-protein ligase Midline-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 5 2 1 2 8.8208 5.8198 2;3 0.0053628 10075 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.364 49.438 67687000 51254000 0 16433000 0 0 0 0 0 0 0 0 0 0 0 0 2504 273 2289 21509;21510;21511;21512;21513 17070;17071;17072;17073 17072 3 AINQGGLTSVAVR Unmodified 1284.715 0.71499837 1819 P60900 PSMA6 Proteasome subunit alpha type-6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.718 52.861 2 5.3389E-12 58853 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 125.74 103.1 810920000 0 0 0 54577000 14103000 24040000 14080000 23046000 11724000 31285000 124760000 125850000 26418000 64610000 296430000 2505 1819 2290 21514;21515;21516;21517;21518;21519;21520;21521;21522;21523;21524;21525 17074;17075;17076;17077;17078;17079;17080;17081;17082;17083;17084;17085 17081 11 AINQGGLTSVAVRGK Unmodified 1469.8314 0.83142511 1819 P60900 PSMA6 Proteasome subunit alpha type-6 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 52.22 44.205 3 0.0060213 58265 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 57.414 45.974 110090000 110090000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2506 1819 2291 21526;21527 17086;17087 17086 2 AINQQTGAFVEISR Unmodified 1532.7947 0.79470526 3690 Q92945 KHSRP Far upstream element-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 2 1 1 1 1 1 1 1 1 1 1 1 63.431 63.463 2 3.2924E-33 71901 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 164.04 114.32 264040000 0 0 0 16385000 11404000 18707000 11050000 13602000 14607000 23570000 25555000 30661000 13749000 29633000 55119000 2507 3690 2292 21528;21529;21530;21531;21532;21533;21534;21535;21536;21537;21538;21539;21540 17088;17089;17090;17091;17092;17093;17094;17095;17096;17097;17098;17099;17100 17091 13 AINSSGLAHVENEEQYTQALEK Unmodified 2430.1663 0.16629665 298 O43150 ASAP2 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 yes yes 0 0 0 By MS/MS 3 0 1 1 73.462 69.514 3 3.4375E-05 84069 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 65.784 57.289 4803900 0 4803900 0 0 0 0 0 0 0 0 0 0 0 0 0 2508 298 2293 21541 17101 17101 1 AINTLETR Unmodified 916.49779 0.49779495 3665 Q92805 GOLGA1 Golgin subfamily A member 1 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 25.705 25.788 2 0.043986 27364 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 49.058 6.5837 12078000 0 0 0 0 0 0 5087600 0 0 6990300 0 0 0 0 0 2509 3665 2294 21542;21543 17102 17102 1 AINTLNGLR Unmodified 970.55598 0.55597854 2566 Q15717 ELAVL1 ELAV-like protein 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 46.646 46.674 2 0.0090332 52352 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 67.903 27.7 140940000 0 0 0 9878500 10695000 16092000 14859000 14607000 11268000 25780000 0 0 0 0 37764000 2510 2566 2295 21544;21545;21546;21547;21548;21549;21550;21551 17103;17104;17105;17106;17107;17108 17107 4 AINTQEAPVK Unmodified 1069.5768 0.57677356 461 O75146 HIP1R Huntingtin-interacting protein 1-related protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 26.205 26.23 2 0.02504 28277 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 44.719 27.162 11178000 0 0 0 4323400 0 2223300 969390 1716200 0 1945300 0 0 0 0 0 2511 461 2296 21552;21553;21554;21555;21556 17109 17109 1 AINVDLQSDAALQVDISDALSERDK Unmodified 2685.3457 0.34571757 5032 Q9UNH7 SNX6 Sorting nexin-6;Sorting nexin-6, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS 2.67 0.471 1 2 2 1 93.668 88.71 3 0.00044685 92094 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 40.682 37.639 17057000 12048000 5008400 0 0 0 0 0 0 0 0 0 0 0 0 0 2512 5032 2297 21557;21558;21559 17110;17111;17112 17110 3 AINVLLEGNPDTHSWEMVGK Oxidation (M) 2225.0787 0.078667612 2380 Q14157 UBAP2L Ubiquitin-associated protein 2-like yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 79.029 79.18 3 2.5591E-16 91078 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 90.972 82.264 103880000 0 0 0 0 0 9321400 3969400 0 17748000 20976000 11734000 9452000 0 0 30679000 2513 2380 2298 21560;21561;21562;21563;21564;21565;21566;21567 17113;17114;17115;17116;17117;17118 17116 3870 6 AINVQEEK Unmodified 929.48181 0.48181054 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 17.216 17.364 2 0.0067154 17035 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 98.523 54.128 299440000 0 0 0 23560000 22041000 40513000 26575000 0 0 32103000 0 41817000 31371000 31358000 50108000 2514 2344 2299 21568;21569;21570;21571;21572;21573;21574;21575;21576 17119;17120;17121;17122;17123;17124;17125;17126;17127 17120 9 AIPDLTAPVAAVQAAVSNLVRVGK Unmodified 2359.3587 0.35872928 1073 P18206 VCL Vinculin yes yes 0 0 1 By MS/MS By MS/MS 2 0.707 1 2 1 2 2 104.69 101.9 3 5.8091E-17 122729 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.102 76.37 111540000 20406000 91136000 0 0 0 0 0 0 0 0 0 0 0 0 0 2515 1073 2300 21577;21578;21579;21580 17128;17129;17130;17131;17132 17129 5 AIPLAIFQAEPTVR Unmodified 1524.8664 0.86641364 2142 Q07864 POLE DNA polymerase epsilon catalytic subunit A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 89.144 89.275 2 0.0038923 103408 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.344 53.698 12827000 0 0 0 0 0 0 0 1392400 0 0 0 4292900 1372800 2426800 3342500 2516 2142 2301 21581;21582;21583;21584;21585 17133;17134;17135 17133 3 AIPLAIFQAEPTVRK Unmodified 1652.9614 0.96137665 2142 Q07864 POLE DNA polymerase epsilon catalytic subunit A yes yes 0 0 1 By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 82.583 82.673 3 0.002139 95739 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 40.801 36.824 20904000 0 0 0 685690 0 2981600 975200 1837100 1899700 0 2046800 3207900 0 0 7269800 2517 2142 2302 21586;21587;21588;21589;21590;21591;21592;21593 17136;17137;17138 17136 3 AIPLALEGK Unmodified 910.54877 0.54876789 4738 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 64.104 60.887 2 0.021454 69364 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 52.255 16.817 28841000 0 19509000 0 0 9332400 0 0 0 0 0 0 0 0 0 0 2518 4738 2303 21594;21595 17139;17140 17140 2 AIPNNQVLGK Unmodified 1052.5978 0.59784335 438 O60869 EDF1 Endothelial differentiation-related factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.016 37.196 2 0.0051819 39600 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.984 49.464 158880000 0 0 0 6741900 5597800 4645700 6428700 6425400 5542800 7509900 22216000 29455000 6380400 18351000 39585000 2519 438 2304 21596;21597;21598;21599;21600;21601;21602;21603;21604;21605;21606;21607 17141;17142;17143;17144 17142 4 AIPNQGEILVIR Unmodified 1321.7718 0.77178497 1630 P50570 DNM2 Dynamin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.109 76.229 2 0.00047903 87965 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 79.148 70.19 40276000 0 0 0 0 2523700 0 3527700 2972200 2186200 4279700 3828200 6715000 2784000 4016500 7443100 2520 1630 2305 21608;21609;21610;21611;21612;21613;21614;21615;21616;21617;21618 17145;17146;17147;17148;17149;17150;17151 17150 7 AIPPGCGDEVEEEDESILDTVIK Unmodified 2514.1683 0.16833006 218 O14810 CPLX1 Complexin-1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 94.13 90.084 3 0.0017575 111769 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 37.228 33.565 11831000 0 11831000 0 0 0 0 0 0 0 0 0 0 0 0 0 2521 218 2306 21619;21620 17152;17153 17152 2 AIPQLQGYLR Unmodified 1157.6557 0.65569258 2083 Q02878 RPL6 60S ribosomal protein L6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.046 76.107 2 0.0060966 87374 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 82.671 46.276 157920000 0 0 0 6251500 6979800 7548300 6750400 10851000 8222300 15846000 18010000 23541000 13692000 13556000 26668000 2522 2083 2307 21621;21622;21623;21624;21625;21626;21627;21628;21629;21630;21631;21632 17154;17155;17156;17157;17158;17159;17160;17161;17162;17163;17164;17165 17159 12 AIPTVNHSGTFSPQAPVPTTVPVVDVR Unmodified 2785.4763 0.47627824 2604 Q16513 PKN2 Serine/threonine-protein kinase N2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 82.636 82.74 3 3.6011E-36 95795 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 60.419 58.224 183910000 0 0 0 0 7039200 19441000 4761900 11501000 8934000 27711000 17923000 20716000 8015100 9146400 48720000 2523 2604 2308 21633;21634;21635;21636;21637;21638;21639;21640;21641;21642;21643 17166;17167;17168;17169;17170;17171;17172;17173;17174 17169 9 AIPVSPSAVEEDEDEDGHTVVATAR Unmodified 2593.2144 0.21436905 2136 Q07157 TJP1 Tight junction protein ZO-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 67.895 68.042 3 5.7148E-76 77467 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 131.43 123.89 150390000 0 0 0 0 12518000 16078000 8499100 10519000 9610800 21270000 13687000 14857000 7570800 12110000 23672000 2524 2136 2309 21644;21645;21646;21647;21648;21649;21650;21651;21652;21653;21654 17175;17176;17177;17178;17179;17180;17181;17182;17183;17184;17185;17186;17187 17179 12 AIPVSQQMEGPHLPNK Unmodified 1744.893 0.89303909 1113 P20810 CAST Calpastatin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 64.089 58.095 3 0.00021082 75171 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.26 58.059 42146000 22680000 15101000 4363900 0 0 0 0 0 0 0 0 0 0 0 0 2525 1113 2310 21655;21656;21657 17188;17189 17188 2 AIQAAFFYLEPR Unmodified 1424.7452 0.74523587 92 CON__Q3SZR3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 88.441 88.52 2 0.0027969 102680 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 73.067 48.212 + 10879000 0 0 0 0 1198100 1138300 1182900 0 1216200 3258200 0 0 0 0 2884900 2526 92 2311 21658;21659;21660;21661;21662;21663 17190;17191;17192;17193;17194 17191 5 AIQAELLK Unmodified 884.53312 0.53311783 2162 Q08752 PPID Peptidyl-prolyl cis-trans isomerase D yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 56.525 51.672 2 0.011975 66906 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.59 31.559 532270000 0 519390000 12875000 0 0 0 0 0 0 0 0 0 0 0 0 2527 2162 2312 21664;21665;21666 17195;17196 17195 2 AIQALNGR Unmodified 841.477 0.47699993 4912 Q9UHX1 PUF60 Poly(U)-binding-splicing factor PUF60 yes yes 0 0 0 By matching By MS/MS By matching 10 0 3 1 1 1 22.714 22.983 2 0.025448 24132 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 58.687 36.065 115950000 0 0 0 0 0 0 1659100 0 0 44488000 0 0 0 0 69800000 2528 4912 2313 21667;21668;21669 17197 17197 1 AIQAVATNPK Unmodified 1011.5713 0.57129425 2853 Q68CQ4 DIEXF Digestive organ expansion factor homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 23.844 23.633 2 0.0049926 24680 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 70.747 39.743 77633000 0 44562000 0 0 2647600 2888600 2859100 2303800 2021700 3648200 3257900 3494600 5229300 4720300 0 2529 2853 2314 21670;21671;21672;21673;21674;21675;21676;21677;21678;21679;21680;21681 17198;17199;17200;17201;17202;17203;17204;17205;17206;17207 17204 10 AIQDAILEVLK Unmodified 1211.7125 0.71253876 3204 Q86Y56 DNAAF5 Dynein assembly factor 5, axonemal yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 91.803 91.926 2 4.3531E-05 106530 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 116.3 62.337 14751000 0 0 0 0 0 4039600 0 3129600 0 0 0 0 0 0 7582300 2530 3204 2315 21682;21683;21684 17208 17208 1 AIQDHLLEVEQSK Unmodified 1508.7835 0.78347187 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.59 1 6 2 22 3 4 2 1 1 2 2 2 2 2 2 2 2 2 2 59.989 59.016 2;3 6.6904E-47 71917 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 212.59 190.84 2012800000 45962000 436350000 360000000 9660500 9971800 98102000 71121000 76429000 60283000 102160000 129280000 141210000 127580000 118940000 225710000 2531 965 2316 21685;21686;21687;21688;21689;21690;21691;21692;21693;21694;21695;21696;21697;21698;21699;21700;21701;21702;21703;21704;21705;21706;21707;21708;21709;21710;21711;21712;21713;21714;21715 17209;17210;17211;17212;17213;17214;17215;17216;17217;17218;17219;17220;17221;17222;17223;17224;17225;17226;17227;17228;17229;17230;17231;17232;17233;17234;17235;17236;17237 17228 24 AIQDPAFSDGIR Unmodified 1288.6412 0.64116473 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.2 59.31 2 7.6904E-06 68431 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 109.66 99.883 253530000 0 0 0 13099000 13911000 26700000 16942000 18264000 9899100 21384000 21596000 33450000 18989000 23837000 35457000 2532 3119 2317 21716;21717;21718;21719;21720;21721;21722;21723;21724;21725;21726;21727 17238;17239;17240;17241;17242;17243;17244;17245;17246;17247;17248;17249;17250 17249 13 AIQDQLPR Unmodified 939.51378 0.51377937 4499 Q9HB96 FANCE Fanconi anemia group E protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 39.496 39.638 2 0.029645 43855 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 56.011 34.24 44771000 0 0 0 3886500 5893400 3629700 4649600 3513400 0 6062700 0 7140500 4945600 0 5050100 2533 4499 2318 21728;21729;21730;21731;21732;21733;21734;21735;21736 17251 17251 1 AIQDTNNLK Unmodified 1015.5298 0.52982336 4488 Q9HAS0 C17orf75 Protein Njmu-R1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 19.101 19.179 2 0.019448 19668 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 53.968 28.141 22857000 0 0 0 0 2851700 5307400 2866300 0 0 6928400 4902700 0 0 0 0 2534 4488 2319 21737;21738;21739;21740;21741 17252 17252 1 AIQDVTIK Unmodified 886.51238 0.51238239 3414 Q8ND24 RNF214 RING finger protein 214 yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.517 37.697 2 0.012232 40966 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 75.109 16.128 245000000 0 0 0 16473000 16388000 19887000 18730000 22464000 14538000 19489000 22622000 25631000 19984000 16401000 32397000 2535 3414 2320 21742;21743;21744;21745;21746;21747;21748;21749;21750;21751;21752;21753 17253;17254;17255;17256;17257;17258;17259 17259 7 AIQEPDDARDYFQMAR Unmodified 1924.8738 0.87376021 1331 P33981 TTK Dual specificity protein kinase TTK yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 70.38 70.581 3 0.0029885 80576 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.297 37.718 51008000 0 0 0 0 0 3321200 0 5338100 0 4910100 7145700 5428900 5142400 4940100 14782000 2536 1331 2321 21754;21755;21756;21757;21758;21759;21760;21761 17260;17261;17262;17263;17264;17265;17266 17262 7 AIQETVEK Unmodified 916.48656 0.48656157 3928 Q96MW5 COG8 Conserved oligomeric Golgi complex subunit 8 yes yes 0 0 0 By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 16.821 17.031 2 0.03623 15916 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 52.018 4.2683 160480000 0 0 0 11641000 0 8571200 13157000 12311000 0 13430000 32494000 22494000 0 0 46381000 2537 3928 2322 21762;21763;21764;21765;21766;21767;21768;21769 17267 17267 1 AIQGGTSHHLGQNFSK Unmodified 1680.8332 0.83321603 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 24.612 24.921 3 0.00020263 25063 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.965 59.907 343690000 0 0 0 0 0 46067000 29547000 0 15566000 35000000 35077000 47286000 0 25527000 109620000 2538 848 2323 21770;21771;21772;21773;21774;21775;21776;21777 17268;17269;17270;17271;17272;17273;17274;17275;17276 17273 9 AIQHENVDVR Unmodified 1179.5996 0.59963426 2310 Q13535 ATR Serine/threonine-protein kinase ATR yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 19.278 19.462 3 0.029011 19851 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 39.625 27.009 45512000 0 0 0 8086200 0 7943800 0 6334700 0 7853600 4629800 0 5123700 5539900 0 2539 2310 2324 21778;21779;21780;21781;21782;21783;21784 17277;17278 17277 1 AIQIINR Unmodified 826.50249 0.5024864 1454 P42345 MTOR Serine/threonine-protein kinase mTOR yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 40.406 40.427 2 0.039328 45126 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 69.093 22.327 45061000 0 0 0 3219300 4520300 6233400 5819900 0 6023300 10768000 0 0 0 0 8477600 2540 1454 2325 21785;21786;21787;21788;21789;21790;21791 17279 17279 1 AIQINPAFADAHSNLASIHK Unmodified 2117.1018 0.10178632 271 O15294 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.326 72.396 4 1.5669E-07 83324 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 69.122 62.274 359870000 0 0 0 6724800 6772000 37771000 11599000 35130000 26802000 37132000 24067000 35164000 28707000 23181000 86824000 2541 271 2326 21792;21793;21794;21795;21796;21797;21798;21799;21800;21801;21802;21803 17280;17281;17282;17283;17284;17285;17286;17287;17288;17289;17290;17291;17292 17281 13 AIQIVTPPVDK Unmodified 1179.6863 0.68632401 3672 Q92851 CASP10 Caspase-10;Caspase-10 subunit p23/17;Caspase-10 subunit p12 yes yes 0 0 0 By MS/MS 2 0 1 1 70.025 64.156 2 0.038639 81648 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 50.034 39.168 19791000 0 19791000 0 0 0 0 0 0 0 0 0 0 0 0 0 2542 3672 2327 21804 17293 17293 1 AIQLEYSEAR Unmodified 1178.5932 0.5931519 308 O43242 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 49.793 49.931 2 0.0009285 57072 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 112.84 72.84 174640000 0 0 0 7993100 14716000 16908000 25487000 0 0 24774000 21729000 44498000 0 2799900 15731000 2543 308 2328 21805;21806;21807;21808;21809;21810;21811;21812;21813;21814 17294;17295;17296;17297;17298;17299;17300;17301 17300 8 AIQLEYSEARR Unmodified 1334.6943 0.69426293 308 O43242 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 41.287 41.746 3 0.0023496 46399 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 73.781 51.735 107940000 0 0 0 0 0 0 0 0 0 0 107940000 0 0 0 0 2544 308 2329 21815;21816;21817 17302;17303;17304 17304 2 AIQLNPSYIR Unmodified 1173.6506 0.6506072 4034 Q99614 TTC1 Tetratricopeptide repeat protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 66.956 67.105 2 0.005999 76845 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 66.692 49.452 59882000 0 0 0 0 4061300 2869000 4939100 3575300 3723100 4929800 12099000 12287000 0 0 11398000 2545 4034 2330 21818;21819;21820;21821;21822;21823;21824;21825;21826 17305;17306;17307;17308;17309;17310;17311;17312 17310 8 AIQLNSNSVQALLLK Unmodified 1610.9356 0.93555583 4944 Q9UJX3 ANAPC7 Anaphase-promoting complex subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 87.951 87.304 2 6.2695E-28 101281 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 138.99 125.09 40277000 5153600 0 0 0 1647000 2732400 0 2018800 1937000 6195700 3109500 3250700 1644900 2721300 9866300 2546 4944 2331 21827;21828;21829;21830;21831;21832;21833;21834;21835;21836;21837 17313;17314;17315;17316;17317;17318;17319;17320 17315 8 AIQLSGAEQLEALK Unmodified 1469.809 0.80895834 4137 Q9BT78 COPS4 COP9 signalosome complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.39 3.7 5 1 12 1 4 1 1 1 1 1 1 1 1 1 1 1 1 1 79.015 77.49 2;3 2.4066E-18 97278 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.62 91.204 1170700000 35558000 886550000 28204000 4596700 10468000 16414000 8515000 14730000 8447900 27805000 23964000 25033000 11222000 20096000 49119000 2547 4137 2332 21838;21839;21840;21841;21842;21843;21844;21845;21846;21847;21848;21849;21850;21851;21852;21853;21854;21855 17321;17322;17323;17324;17325;17326;17327;17328;17329;17330;17331;17332;17333;17334;17335;17336;17337;17338 17326 17 AIQPQAAQGPAAVQQK Unmodified 1604.8635 0.86345352 3915 Q96L91 EP400 E1A-binding protein p400 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 32 3 3 3 3 3 3 2 2 3 3 2 2 45.345 45.467 2;3 1.4078E-23 38328 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 121.6 111.65 375230000 0 0 0 21347000 16808000 27533000 22592000 34956000 18126000 25802000 33978000 57787000 39709000 27104000 49491000 2548 3915 2333 21856;21857;21858;21859;21860;21861;21862;21863;21864;21865;21866;21867;21868;21869;21870;21871;21872;21873;21874;21875;21876;21877;21878;21879;21880;21881;21882;21883;21884;21885;21886;21887 17339;17340;17341;17342;17343;17344;17345;17346;17347;17348;17349;17350;17351;17352;17353;17354;17355;17356;17357;17358 17351 20 AIQQLFGK Unmodified 903.5178 0.51780212 2805 Q5VIR6 VPS53 Vacuolar protein sorting-associated protein 53 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 56.3 56.422 2 0.013612 63278 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 71.949 48.64 101610000 0 0 0 6767600 7353500 9511800 8966200 10622000 0 9283400 8330200 11762000 8597600 8473700 11939000 2549 2805 2334 21888;21889;21890;21891;21892;21893;21894;21895;21896;21897;21898 17359;17360;17361;17362;17363;17364 17362 6 AIQTLGYFPVGDGDFPHQK Unmodified 2089.0269 0.026890038 2828 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 81.565 81.699 3 6.6278E-05 94210 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.034 50.504 52339000 0 0 0 0 0 8752200 0 2816300 4490500 6981700 0 0 0 3650000 25649000 2550 2828 2335 21899;21900;21901;21902;21903;21904 17365;17366;17367;17368;17369;17370 17368 6 AIRDGVIEASINHEK Unmodified 1650.8689 0.86893283 308 O43242 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.15 2.41 2 1 24 3 2 2 2 2 2 2 2 2 2 2 2 2 44.601 43.954 3;4 8.6634E-15 48144 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 101.39 88.041 1180700000 141570000 0 0 40660000 32011000 153590000 21795000 30953000 36857000 117240000 176610000 250410000 30367000 29691000 119010000 2551 308 2336 21905;21906;21907;21908;21909;21910;21911;21912;21913;21914;21915;21916;21917;21918;21919;21920;21921;21922;21923;21924;21925;21926;21927;21928;21929;21930;21931 17371;17372;17373;17374;17375;17376;17377;17378;17379;17380;17381;17382;17383;17384;17385;17386;17387;17388;17389;17390;17391;17392;17393 17387 21 AIRDYQGPLK Unmodified 1159.635 0.63495714 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 20 1 2 2 2 2 2 2 2 2 1 2 33.259 33.452 2;3 4.5105E-09 36556 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 137.28 80.556 6324600000 0 0 0 151330000 360720000 416950000 1182800000 1600800000 1215300000 311830000 494150000 486210000 0 24881000 79588000 2552 1714 2337 21932;21933;21934;21935;21936;21937;21938;21939;21940;21941;21942;21943;21944;21945;21946;21947;21948;21949;21950;21951 17394;17395;17396;17397;17398;17399;17400;17401;17402;17403;17404;17405;17406;17407;17408;17409;17410 17396 11 AIRGHLENNPALEK Unmodified 1560.8372 0.83723877 808 P05388;Q8NHW5 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like yes no 0 0 1 By MS/MS 2 0 1 1 38.628 32.066 4 0.032848 44689 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 36.77 18.174 11007000 11007000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2553 808 2338 21952 17411 17411 1 AIRGIGTDEK Unmodified 1058.572 0.57202253 968 P12429 ANXA3 Annexin A3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 22.91 18.975 2 0.013901 26786 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 106.68 51.179 154630000 122670000 16321000 15635000 0 0 0 0 0 0 0 0 0 0 0 0 2554 968 2339 21953;21954;21955 17412 17412 1 AIRLELQGPR Unmodified 1151.6775 0.67749065 1085 P19338 NCL Nucleolin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 54.273 54.408 3 0.00074846 61922 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 94.692 67.906 296790000 0 0 0 7761700 8255600 17100000 15789000 17840000 25866000 18354000 30973000 45796000 24097000 19804000 65156000 2555 1085 2340 21956;21957;21958;21959;21960;21961;21962;21963;21964;21965;21966;21967 17413;17414;17415;17416;17417;17418;17419;17420;17421;17422;17423;17424 17419 11 AIRPQIDLK Unmodified 1052.6342 0.63422886 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.677 45.847 2 0.041359 51694 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 101.54 65.147 321720000 0 0 0 13841000 12064000 24157000 18416000 15490000 20062000 25282000 27949000 42251000 41208000 28063000 52937000 2556 1986 2341 21968;21969;21970;21971;21972;21973;21974;21975;21976;21977;21978;21979 17425 17425 0 AIRPQIDLKR Unmodified 1208.7353 0.73533988 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.301 38.48 3 0.014817 41207 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.015 71.724 181940000 0 0 0 14854000 5177900 10054000 11140000 8041100 6985000 12092000 15141000 39903000 17763000 15131000 25653000 2557 1986 2342 21980;21981;21982;21983;21984;21985;21986;21987;21988;21989;21990;21991 17426;17427;17428;17429;17430 17427 1 AISAPTSPTR Unmodified 999.53491 0.53490874 4570 Q9NQG6 MIEF1 Mitochondrial dynamics protein MID51 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 27.036 27.236 2 0.00071151 29427 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 121.09 89.156 144490000 0 0 0 7435000 9348900 7981200 12209000 0 8120600 14745000 17388000 22069000 15217000 14960000 15011000 2558 4570 2343 21992;21993;21994;21995;21996;21997;21998;21999;22000;22001;22002 17431;17432;17433;17434;17435;17436;17437;17438 17438 8 AISEAQESVTK Unmodified 1161.5877 0.58773217 2960 Q6PJT7 ZC3H14 Zinc finger CCCH domain-containing protein 14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 21.53 21.721 2 0.00029633 22506 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 90.15 64.414 66895000 0 0 0 0 6404400 0 7718700 0 7551300 0 0 0 10305000 13369000 21548000 2559 2960 2344 22003;22004;22005;22006;22007;22008 17439;17440;17441;17442;17443;17444 17443 6 AISEELDHALNDMTSI Oxidation (M) 1773.8091 0.80909427 831;884 P06753;P09493 TPM3;TPM1 Tropomyosin alpha-3 chain;Tropomyosin alpha-1 chain no no 0 1 0 By MS/MS 2 0 1 1 82.192 77.487 2 0.00043859 96421 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.845 75.059 55699000 0 55699000 0 0 0 0 0 0 0 0 0 0 0 0 0 2560 831;884 2345 22009 17445 17445 1015 1 AISEELDHALNDMTSI Unmodified 1757.8142 0.81417965 831;884 P06753;P09493 TPM3;TPM1 Tropomyosin alpha-3 chain;Tropomyosin alpha-1 chain no no 0 0 0 By MS/MS 2 0 1 1 94.215 89.319 2 0.0065031 110785 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.332 61.359 50983000 0 50983000 0 0 0 0 0 0 0 0 0 0 0 0 0 2561 831;884 2345 22010 17446 17446 1 AISEELDNALNDITSL Unmodified 1716.8418 0.84177461 90;853 CON__Q3SX28;P07951 TPM2 Tropomyosin beta chain no no 0 0 0 By MS/MS 2 0 1 1 99.026 94.292 2 8.1612E-07 116596 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.78 121.17 + 241540000 0 241540000 0 0 0 0 0 0 0 0 0 0 0 0 0 2562 90;853 2346 22011 17447;17448 17447 2 AISEQTGK Unmodified 832.42905 0.42904669 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 7.5 3.83 1 2 7 2 1 1 1 1 1 1 1 1 16.163 16.091 2 0.0042848 3713 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 111.65 65.278 636960000 94991000 399660000 0 3191200 0 13398000 36459000 45184000 38505000 3080400 2496500 0 0 0 0 2563 1714 2347 22012;22013;22014;22015;22016;22017;22018;22019;22020;22021 17449;17450;17451;17452;17453;17454 17449 4 AISGLEQDQPAR Unmodified 1283.647 0.64697839 477 O75312 ZPR1 Zinc finger protein ZPR1 yes yes 0 0 0 By MS/MS 10 0 1 1 34.56 35.288 2 0.0015314 37843 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.113 51.962 5495100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5495100 2564 477 2348 22022 17455 17455 1 AISGVHTVR Unmodified 938.52976 0.52976379 1427 P41091;Q2VIR3 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein yes no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 15.504 15.705 2 0.0037123 14316 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 101.54 63.896 195410000 0 0 0 0 5047700 8481500 9642400 0 5223400 17875000 27417000 30151000 21063000 22929000 47583000 2565 1427 2349 22023;22024;22025;22026;22027;22028;22029;22030;22031;22032 17456;17457;17458;17459;17460;17461;17462;17463 17459 5 AISPTSATSSGR Unmodified 1133.5677 0.56766543 5204 Q9Y4I1 MYO5A Unconventional myosin-Va yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 19.597 19.923 2 0.018647 20625 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 41.399 34.731 14880000 0 0 0 0 1929900 0 0 0 0 2022800 1860000 2734000 2009300 2080800 2242800 2566 5204 2350 22033;22034;22035;22036;22037;22038;22039 17464;17465 17465 2 AISPYLPR Unmodified 915.5178 0.51780212 1594 P49754 VPS41 Vacuolar protein sorting-associated protein 41 homolog yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 54.562 55.195 2 0.022875 62411 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.799 35.241 9815500 0 0 0 0 0 0 0 0 0 0 0 4824200 0 0 4991300 2567 1594 2351 22040;22041 17466 17466 1 AISQILQESAMQK Oxidation (M) 1461.7497 0.7497289 2979 Q6UWE0 LRSAM1 E3 ubiquitin-protein ligase LRSAM1 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 65.889 61.053 2 0.00028313 78246 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.957 80.043 27952000 0 25897000 2055500 0 0 0 0 0 0 0 0 0 0 0 0 2568 2979 2352 22042;22043 17467 17467 4595 1 AISQILQESAMQK Unmodified 1445.7548 0.75481428 2979 Q6UWE0 LRSAM1 E3 ubiquitin-protein ligase LRSAM1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 76.003 69.467 2;3 4.2937E-13 90256 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 121.61 98.235 41327000 9352000 31975000 0 0 0 0 0 0 0 0 0 0 0 0 0 2569 2979 2352 22044;22045 17468;17469 17469 1 AISRELYEYCIK Unmodified 1543.7705 0.77046434 1434 P41223 BUD31 Protein BUD31 homolog yes yes 0 0 1 By MS/MS 2 0 1 1 71.171 62.905 3 0.023708 83565 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 44.511 15.705 27736000 27736000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2570 1434 2353 22046 17470 17470 1 AISSANLLVR Unmodified 1042.6135 0.61349341 2665 Q32P44 EML3 Echinoderm microtubule-associated protein-like 3 yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 59.42 59.492 2 0.031837 68902 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 42.599 16.862 53278000 0 0 0 3899900 3188800 4720200 4842400 2944100 4011600 6558700 7902700 0 4588600 4296500 6324500 2571 2665 2354 22047;22048;22049;22050;22051;22052;22053;22054;22055;22056;22057 17471;17472 17472 2 AISSASIEGLMGR Unmodified 1290.6602 0.66018561 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 76.916 77.068 2 0.0052313 88946 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 59.542 40.762 51813000 0 0 0 0 0 3448200 2801800 4718700 2714200 5011000 6766400 7645800 2601800 3835900 12269000 2572 5262 2355 22058;22059;22060;22061;22062;22063;22064;22065;22066;22067 17473;17474;17475;17476;17477;17478 17477 6 AISSASSPQSPGDALR Unmodified 1542.7638 0.76379906 3913 Q96KR1 ZFR Zinc finger RNA-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 33.604 33.915 2;3 2.4084E-05 45082 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.492 57.406 16245000 0 0 0 0 0 0 3505500 0 0 0 0 9377100 0 3362100 0 2573 3913 2356 22068;22069;22070;22071 17479;17480;17481;17482 17480 4 AISSASSPQSPGDALRR Unmodified 1698.8649 0.86491009 3913 Q96KR1 ZFR Zinc finger RNA-binding protein yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 36.201 36.457 3 0.0014982 39108 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.962 23.045 26286000 0 0 0 0 1964200 0 0 0 0 3895200 3879600 0 5913000 5283800 5350000 2574 3913 2357 22072;22073;22074;22075;22076;22077 17483;17484;17485 17483 3 AISSDMFFGR Unmodified 1129.5226 0.5226295 3358 Q8N6H7 ARFGAP2 ADP-ribosylation factor GTPase-activating protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.085 75.144 2 0.0023495 86046 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.498 70.512 128020000 0 0 0 4650600 4854700 10310000 6921000 8728400 5402100 12083000 14012000 15572000 8744400 8697700 28042000 2575 3358 2358 22078;22079;22080;22081;22082;22083;22084;22085;22086;22087;22088;22089 17486;17487;17488;17489;17490;17491;17492;17493 17487 8 AISSDMFFGR Oxidation (M) 1145.5175 0.51754412 3358 Q8N6H7 ARFGAP2 ADP-ribosylation factor GTPase-activating protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 61.855 61.908 2 0.016424 70873 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 44.753 7.2041 50344000 0 0 0 4347600 3476200 0 5661500 3878400 5815600 0 6964900 9486600 5921000 4792700 0 2576 3358 2358 22090;22091;22092;22093;22094;22095;22096;22097;22098 17494 17494 4932 1 AISSDMYFGR Oxidation (M) 1161.5125 0.51245874 4534 Q9NP61 ARFGAP3 ADP-ribosylation factor GTPase-activating protein 3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 2 2 2 1 2 2 2 2 2 1 1 46.004 46.19 2 0.0031856 52335 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 71.379 65.276 130890000 0 0 0 5700600 10797000 0 14380000 3484900 12170000 16036000 18383000 22070000 12732000 6371400 8768400 2577 4534 2359 22099;22100;22101;22102;22103;22104;22105;22106;22107;22108;22109;22110;22111;22112;22113;22114;22115;22116;22117 17495;17496;17497;17498;17499;17500;17501;17502;17503;17504;17505;17506;17507;17508 17497 5951 14 AISSDMYFGR Unmodified 1145.5175 0.51754412 4534 Q9NP61 ARFGAP3 ADP-ribosylation factor GTPase-activating protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 58.975 59.082 2 0.030394 67137 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 77.318 7.69 146950000 0 0 0 7577600 6723600 9964200 8542000 10702000 0 14008000 20565000 14142000 15671000 14718000 24339000 2578 4534 2359 22118;22119;22120;22121;22122;22123;22124;22125;22126;22127;22128 17509 17509 0 AISSSAISK Unmodified 862.476 0.47599688 3357 Q8N684 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.56 18.755 2 0.0031256 19009 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 91.069 74.126 753760000 0 0 0 50109000 57013000 46600000 62063000 41731000 47379000 64411000 65295000 81968000 58860000 60769000 117560000 2579 3357 2360 22129;22130;22131;22132;22133;22134;22135;22136;22137;22138;22139;22140 17510;17511;17512;17513;17514;17515;17516;17517;17518;17519;17520 17518 8 AISSSAISR Unmodified 890.48214 0.48214489 2620 Q16630 CPSF6 Cleavage and polyadenylation specificity factor subunit 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.557 21.761 2 0.0036937 22455 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 101.72 67.718 1697500000 0 0 0 74276000 79014000 118630000 116930000 154470000 91611000 152100000 185550000 228360000 160790000 160840000 174970000 2580 2620 2361 22141;22142;22143;22144;22145;22146;22147;22148;22149;22150;22151;22152 17521;17522;17523;17524;17525;17526;17527;17528;17529;17530;17531;17532 17529 11 AISSTEAVLNNR Unmodified 1273.6626 0.66262845 2786;4822 Q5T8P6;Q9P2N5 RBM26;RBM27 RNA-binding protein 26;RNA-binding protein 27 no no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.633 42.809 2 2.2029E-05 47149 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 103.19 74.247 1126400000 0 0 0 76180000 87887000 98855000 86579000 81378000 80436000 101930000 117810000 130240000 88026000 71210000 105860000 2581 2786;4822 2362 22153;22154;22155;22156;22157;22158;22159;22160;22161;22162;22163;22164 17533;17534;17535;17536;17537;17538;17539;17540;17541;17542 17540 10 AISTICSLEK Unmodified 1120.5798 0.57981002 4944 Q9UJX3 ANAPC7 Anaphase-promoting complex subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 50.178 50.59 2 0.0095994 56338 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 80.165 53.035 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2582 4944 2363 22165;22166;22167 17543;17544;17545 17544 3 AISTPIITAQLDK Unmodified 1369.7817 0.78168095 217 O14802 POLR3A DNA-directed RNA polymerase III subunit RPC1 yes yes 0 0 0 By matching By MS/MS 2.5 0.5 1 1 1 1 79.662 75.406 2 0.002716 94030 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.937 74.501 36952000 568900 36383000 0 0 0 0 0 0 0 0 0 0 0 0 0 2583 217 2364 22168;22169 17546 17546 1 AISTRDPLSEITEQEK Unmodified 1815.9214 0.92142191 1452 P42336 PIK3CA Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 72.289 68.674 3 0.001936 84116 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 51.888 32.498 10086000 0 1870900 8215400 0 0 0 0 0 0 0 0 0 0 0 0 2584 1452 2365 22170;22171 17547;17548 17548 2 AISVHSTPEGCSSACK Unmodified 1689.7451 0.74505423 4768 Q9NZI8 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 27.369 23.092 3 0.011826 30698 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 35.771 31.066 52473000 16945000 29424000 6104000 0 0 0 0 0 0 0 0 0 0 0 0 2585 4768 2366 22172;22173;22174 17549;17550;17551 17549 3 AITAVALK Unmodified 785.50109 0.50108942 4580 Q9NQX4 MYO5C Unconventional myosin-Vc yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 54.136 52.596 2 0.020013 58888 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 63.148 12.516 1711500000 551120000 738080000 38671000 0 54939000 60501000 22950000 20041000 15174000 93606000 0 95875000 0 20552000 0 2586 4580 2367 22175;22176;22177;22178;22179;22180;22181;22182;22183;22184;22185 17552;17553;17554;17555 17552 2 AITDGQAGFGNDTLSK Unmodified 1593.7635 0.76346471 3120 Q7Z739 YTHDF3 YTH domain-containing family protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.62 1.7 1 20 1 1 2 1 1 2 2 2 2 1 2 2 2 52.908 52.787 2;3 3.9556E-72 59418 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 184.31 167.96 2858200000 0 20151000 0 144280000 107050000 156960000 201550000 145390000 210570000 316020000 393420000 115200000 275840000 293600000 478170000 2587 3120 2368 22186;22187;22188;22189;22190;22191;22192;22193;22194;22195;22196;22197;22198;22199;22200;22201;22202;22203;22204;22205;22206 17556;17557;17558;17559;17560;17561;17562;17563;17564;17565;17566;17567;17568;17569;17570 17563 15 AITDIIEMDSK Oxidation (M) 1250.6064 0.60641871 4933 Q9UJ41 RABGEF1 Rab5 GDP/GTP exchange factor yes yes 0 1 0 By MS/MS By MS/MS By matching 7.67 3.3 1 2 1 1 1 66.733 65.292 2 0.0013391 78484 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 87.913 68.127 16610000 0 12444000 0 0 0 0 2278600 0 0 0 0 0 0 1887300 0 2588 4933 2369 22207;22208;22209 17571;17572;17573 17572 6280 2 AITDIIEMDSK Unmodified 1234.6115 0.61150408 4933 Q9UJ41 RABGEF1 Rab5 GDP/GTP exchange factor yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 79.11 75.044 2 0.028414 90018 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 53.751 37.87 112290000 0 112290000 0 0 0 0 0 0 0 0 0 0 0 0 0 2589 4933 2369 22210;22211 17574 17574 1 AITEASPAH Unmodified 895.43995 0.43994572 4441 Q9H7Z7 PTGES2 Prostaglandin E synthase 2;Prostaglandin E synthase 2 truncated form yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching 10 0 13 1 2 1 1 1 1 1 1 1 1 1 1 15.424 15.566 2 0.0031349 15214 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 92.319 65.357 197890000 0 0 0 10279000 9960100 8788600 13905000 15909000 7481600 15207000 29335000 26065000 21940000 17216000 21807000 2590 4441 2370 22212;22213;22214;22215;22216;22217;22218;22219;22220;22221;22222;22223;22224 17575;17576;17577;17578;17579;17580;17581;17582;17583;17584 17581 8 AITEPVTVK Unmodified 956.55425 0.5542472 2108 Q04864 REL Proto-oncogene c-Rel yes yes 0 0 0 By MS/MS 2 0 1 1 43.388 38.24 2 0.030391 49596 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.457 30.271 78932000 0 78932000 0 0 0 0 0 0 0 0 0 0 0 0 0 2591 2108 2371 22225 17585 17585 1 AITFLQSATR Unmodified 1106.6084 0.60840804 1347 P35249 RFC4 Replication factor C subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.905 64.994 2 3.0503E-11 74466 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 172.94 110.47 907970000 0 0 0 48381000 52906000 62741000 72979000 61628000 60216000 90419000 88461000 102700000 74451000 73829000 119250000 2592 1347 2372 22226;22227;22228;22229;22230;22231;22232;22233;22234;22235;22236;22237 17586;17587;17588;17589;17590;17591;17592;17593;17594;17595;17596;17597;17598 17592 8 AITFLQSATRLTGGK Unmodified 1562.878 0.87804096 1347 P35249 RFC4 Replication factor C subunit 4 yes yes 0 0 1 By MS/MS 2 0 1 1 84.464 76.334 3 0.00497 99749 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.823 42.702 6154200 6154200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2593 1347 2373 22238 17599 17599 1 AITGASLADIMAK Oxidation (M) 1276.6697 0.66968766 2006 P83731 RPL24 60S ribosomal protein L24 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 63.947 64.081 2 8.3251E-12 73391 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 121.61 107.91 1400300000 0 0 0 0 117370000 134940000 164780000 98331000 101630000 173760000 172840000 0 138080000 117590000 180940000 2594 2006 2374 22239;22240;22241;22242;22243;22244;22245;22246;22247;22248 17600;17601;17602;17603;17604;17605;17606;17607;17608;17609;17610 17601 3256 11 AITGASLADIMAK Unmodified 1260.6748 0.67477304 2006 P83731 RPL24 60S ribosomal protein L24 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.484 79.543 2 9.572E-12 92169 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 150.1 122.85 2038700000 0 0 0 104840000 116860000 146780000 103380000 156750000 123560000 231030000 204240000 265450000 121190000 187770000 276820000 2595 2006 2374 22249;22250;22251;22252;22253;22254;22255;22256;22257;22258;22259;22260 17611;17612;17613;17614;17615;17616;17617;17618;17619;17620;17621;17622 17616 10 AITGFDDPFSGK Unmodified 1253.5928 0.59281755 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.789 75.852 2 2.5937E-05 87521 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 94.297 62.924 798750000 0 0 0 109680000 41808000 50130000 61882000 114660000 37664000 64485000 75747000 78739000 74768000 38485000 50701000 2596 1029 2375 22261;22262;22263;22264;22265;22266;22267;22268;22269;22270;22271;22272 17623;17624;17625;17626;17627;17628;17629;17630 17623 5 AITHLNNNFMFGQK Unmodified 1633.8035 0.8034958 1008 P14866 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 2 67.357 67.599 2;3 2.0444E-16 76653 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.939 79.623 165450000 0 0 0 0 0 16040000 5317900 11372000 7314200 11718000 12620000 14730000 8905400 11979000 65454000 2597 1008 2376 22273;22274;22275;22276;22277;22278;22279;22280;22281;22282;22283 17631;17632;17633;17634;17635;17636;17637;17638;17639;17640;17641;17642 17635 11 AITHLNNNFMFGQK Oxidation (M) 1649.7984 0.79841043 1008 P14866 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 58.437 58.653 3 0.0065039 66820 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 43.761 40.508 24500000 0 0 0 0 0 12622000 0 0 0 0 11878000 0 0 0 0 2598 1008 2376 22284;22285 17643;17644 17644 1380 0 AITHYYIETSDDK Unmodified 1554.7202 0.72020291 2836 Q5W0V3 FAM160B1 Protein FAM160B1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 42.844 41.999 3 0.002184 53361 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 63.185 55.641 95356000 14342000 0 28497000 0 5115800 5463400 0 3648300 0 6153200 7411900 8303000 5870000 6115700 4434900 2599 2836 2377 22286;22287;22288;22289;22290;22291;22292;22293;22294;22295;22296 17645;17646;17647;17648;17649;17650 17648 6 AITIAGVPQSVTECVK Unmodified 1671.8866 0.88655673 2520 Q15365 PCBP1 Poly(rC)-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 77.7 77.391 2 2.1999E-31 89389 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 148.13 138.29 1340000000 0 86427000 0 41596000 32015000 91762000 47891000 40104000 104170000 118880000 131080000 225320000 122400000 97269000 201080000 2600 2520 2378 22297;22298;22299;22300;22301;22302;22303;22304;22305;22306;22307;22308;22309 17651;17652;17653;17654;17655;17656;17657;17658;17659;17660;17661;17662;17663;17664 17651 14 AITPPQQPYK Unmodified 1141.6132 0.61315906 4752 Q9NYV4 CDK12 Cyclin-dependent kinase 12 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 38.949 38.754 2 0.037672 43160 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 40.778 23.538 22714000 0 0 0 5624000 5371900 0 5549200 0 6169500 0 0 0 0 0 0 2601 4752 2379 22310;22311;22312;22313 17665 17665 1 AITSAYYR Unmodified 943.47633 0.47633123 2593 Q15907;P62491;P57735 RAB11B;RAB11A;RAB25 Ras-related protein Rab-11B;Ras-related protein Rab-11A;Ras-related protein Rab-25 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.996 34.178 2 0.0048933 37849 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 114.19 98.079 810610000 0 0 0 37406000 47113000 41737000 50439000 70977000 30378000 65881000 117830000 91485000 121770000 62480000 73109000 2602 2593 2380 22314;22315;22316;22317;22318;22319;22320;22321;22322;22323;22324;22325 17666;17667;17668;17669;17670;17671;17672;17673;17674;17675;17676;17677 17677 11 AITTQNVNTK Unmodified 1088.5826 0.58258722 2010 P84022 SMAD3 Mothers against decapentaplegic homolog 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.411 16.589 2 0.044814 16069 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 38.55 8.0461 30203000 0 0 0 1535500 1812900 2772100 1982400 1208600 1451200 2284800 3619200 3516800 2816100 3135500 4068500 2603 2010 2381 22326;22327;22328;22329;22330;22331;22332;22333;22334;22335;22336;22337 17678 17678 1 AITTSLTTK Unmodified 934.53351 0.53351176 4751 Q9NYU2 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33.239 32.404 2 0.0089253 35048 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 68.214 47.354 559010000 14602000 404750000 7354000 9632800 6937300 11899000 8779500 6555800 7312600 10273000 17650000 8521600 12235000 12207000 20303000 2604 4751 2382 22338;22339;22340;22341;22342;22343;22344;22345;22346;22347;22348;22349;22350;22351;22352 17679;17680;17681 17681 3 AITVFSPDGHLFQVEYAQEAVK Unmodified 2448.2325 0.23252572 219 O14818;Q8TAA3 PSMA7;PSMA8 Proteasome subunit alpha type-7;Proteasome subunit alpha type-7-like yes no 0 0 0 By MS/MS 10 0 1 1 87.384 87.543 3 0.0040125 101325 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 28.891 25.087 6083100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6083100 2605 219 2383 22353 17682 17682 1 AIVAESLNNTSIK Unmodified 1358.7405 0.74054442 1349 P35251 RFC1 Replication factor C subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 56.59 55.935 2 6.788E-26 63475 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 163.64 131.32 192820000 0 60742000 0 6847900 7322900 8572000 11096000 11700000 7290300 12051000 13405000 17679000 12074000 10772000 13268000 2606 1349 2384 22354;22355;22356;22357;22358;22359;22360;22361;22362;22363;22364;22365;22366;22367 17683;17684;17685;17686;17687;17688;17689;17690;17691;17692;17693;17694 17684 12 AIVAIENPADVSVISSR Unmodified 1739.9418 0.94176342 875 P08865 RPSA 40S ribosomal protein SA yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.027 81.087 2 1.1129E-95 93876 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 187.44 170.53 283220000 0 0 0 8892700 7154400 9621800 10393000 16820000 7419200 13790000 45710000 52554000 13105000 29442000 68315000 2607 875 2385 22368;22369;22370;22371;22372;22373;22374;22375;22376;22377;22378;22379 17695;17696;17697;17698;17699;17700;17701;17702;17703;17704;17705;17706 17704 12 AIVDALPPPCESACTVPTDVDK Unmodified 2354.1134 0.11339814 2505 Q15181 PPA1 Inorganic pyrophosphatase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 76.894 77.102 3 4.4947E-08 88517 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.814 51.424 30188000 0 0 0 0 0 0 0 0 0 0 5345800 0 0 3694900 21148000 2608 2505 2386 22380;22381;22382 17707;17708;17709 17707 3 AIVDGNLK Unmodified 828.47052 0.47051757 1124;487 P21333;O75369 FLNA;FLNB Filamin-A;Filamin-B no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 5 4.1 1 2 2 2 1 1 1 33.058 30.978 2 0.01803 39762 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.369 34.844 1344900000 0 1265600000 46107000 0 15990000 0 0 17201000 0 0 0 0 0 0 0 2609 1124;487 2387 22383;22384;22385;22386;22387 17710;17711;17712;17713 17710 4 AIVEFLSNLAR Unmodified 1231.6925 0.69247202 2235 Q13112 CHAF1B Chromatin assembly factor 1 subunit B yes yes 0 0 0 By MS/MS 10 0 1 1 89.708 89.851 2 0.020859 103992 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.463 36.904 2274300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2274300 2610 2235 2388 22388 17714 17714 0 AIVICPTDEDLK Unmodified 1372.6908 0.69081704 4162 Q9BUJ2 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 66.375 65.039 2 3.6535E-07 82199 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.66 127.51 856310000 28250000 261390000 1660200 31450000 42213000 41023000 45140000 39322000 42336000 51191000 55991000 55714000 41382000 52377000 66866000 2611 4162 2389 22389;22390;22391;22392;22393;22394;22395;22396;22397;22398;22399;22400;22401;22402;22403;22404 17715;17716;17717;17718;17719;17720;17721;17722;17723;17724;17725 17718 9 AIVLFNPDSK Unmodified 1102.6023 0.60226003 1095 P19793 RXRA Retinoic acid receptor RXR-alpha yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 70.992 71.041 2 0.009388 81619 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 57.859 38.344 125490000 0 0 0 7685700 7251700 9706800 12176000 10043000 6969200 12978000 14295000 0 12838000 10124000 21419000 2612 1095 2390 22405;22406;22407;22408;22409;22410;22411;22412;22413;22414;22415 17726;17727;17728;17729;17730;17731;17732;17733;17734 17727 8 AIVLFSPDHPGLTSTSQIEK Unmodified 2139.1212 0.12118435 1559 P49116 NR2C2 Nuclear receptor subfamily 2 group C member 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 83.96 78.649 3 6.765E-10 101010 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.56 78.979 20937000 18539000 0 2398100 0 0 0 0 0 0 0 0 0 0 0 0 2613 1559 2391 22416;22417 17735;17736 17735 2 AIVNNAFK Unmodified 875.4865 0.48650199 3592 Q8WXI4 ACOT11 Acyl-coenzyme A thioesterase 11 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 38.766 37.656 2 0.0083495 41710 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 86.512 15.17 114310000 34236000 15498000 0 4924000 7019300 0 6334700 11946000 7593700 0 10957000 14085000 0 1720300 0 2614 3592 2392 22418;22419;22420;22421;22422;22423;22424;22425;22426;22427 17737;17738;17739;17740 17740 4 AIVNVIGMHK Oxidation (M) 1096.6063 0.60629955 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 42.974 42.521 2 0.0024008 46275 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 75.738 60.102 172100000 21826000 0 0 6062000 6409600 9531400 11399000 11528000 8209800 14647000 14115000 18145000 21779000 12894000 15550000 2615 516 2393 22428;22429;22430;22431;22432;22433;22434;22435;22436;22437;22438;22439;22440 17741;17742;17743;17744;17745;17746;17747;17748;17749;17750;17751;17752;17753 17749 665 13 AIVNVIGMHK Unmodified 1080.6114 0.61138492 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 53.685 54.068 2 0.0018002 59632 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 101.64 92.721 33191000 0 0 0 0 0 0 0 0 0 0 4483700 0 7138000 10889000 10681000 2616 516 2393 22441;22442;22443;22444;22445 17754;17755;17756;17757;17758 17754 5 AIVPILLDANVSTYDK Unmodified 1730.9455 0.94545182 1857 P61764 STXBP1 Syntaxin-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 90.201 90.342 2 0.014223 104822 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 43.084 28.927 8079400 0 0 0 0 0 0 0 0 0 2636100 1703500 0 0 870320 2869500 2617 1857 2394 22446;22447;22448;22449 17759 17759 1 AIVPLEAR Unmodified 867.5178 0.51780212 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.432 51.581 2 0.0052859 58325 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 107.43 73.691 2737600000 0 0 0 130140000 197440000 180300000 241710000 238380000 162390000 257860000 273140000 357610000 245220000 227630000 225800000 2618 213 2395 22450;22451;22452;22453;22454;22455;22456;22457;22458;22459;22460;22461 17760;17761;17762;17763;17764;17765;17766;17767;17768;17769;17770;17771;17772;17773;17774;17775;17776;17777;17778;17779 17760 20 AIVQLVNER Unmodified 1040.5978 0.59784335 2497 Q15102 PAFAH1B3 Platelet-activating factor acetylhydrolase IB subunit gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 53.834 53.954 2 0.031872 61692 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 47.574 12.219 131980000 0 0 0 8327900 6842800 13360000 7948600 9545500 0 0 23973000 20908000 0 16879000 24197000 2619 2497 2396 22462;22463;22464;22465;22466;22467;22468;22469;22470 17780;17781 17781 2 AIVQQWLEYR Unmodified 1304.6877 0.68772099 319 O43324 EEF1E1 Eukaryotic translation elongation factor 1 epsilon-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 80.29 80.499 2 0.0017953 92642 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 101.72 74.418 27614000 0 0 0 0 0 0 0 5773700 0 0 0 0 0 0 21841000 2620 319 2397 22471;22472;22473;22474;22475;22476 17782;17783;17784;17785;17786;17787 17784 6 AIVQVFEGTSGIDAR Unmodified 1561.81 0.81002097 1018 P15313 ATP6V1B1 V-type proton ATPase subunit B, kidney isoform yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 49.988 49.905 3 0.0019374 57058 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 33.204 17.104 25153000 0 0 0 0 7741000 0 7343300 0 0 0 0 0 0 10068000 0 2621 1018 2398 22477;22478;22479 17788;17789;17790 17790 3 AIVSGGGGTIVAQPVQTLTK Unmodified 1896.068 0.068026571 5000 Q9ULM3 YEATS2 YEATS domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 75.014 75.05 2 8.3882E-53 86570 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 118.16 107.31 107630000 0 0 0 4594300 11315000 10186000 4786000 5873900 5558300 14745000 15269000 21446000 6294400 7558000 0 2622 5000 2399 22480;22481;22482;22483;22484;22485;22486;22487;22488;22489;22490 17791;17792;17793;17794;17795;17796;17797;17798;17799 17797 9 AIVVTDGER Unmodified 958.50836 0.50835964 1534 P48163 ME1 NADP-dependent malic enzyme yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 27.822 28.102 2 0.040615 30392 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 44.349 26.501 74493000 0 0 0 18011000 0 1494600 2149800 0 0 0 8490000 14310000 0 6264300 23773000 2623 1534 2400 22491;22492;22493;22494;22495;22496;22497 17800;17801 17801 2 AIVWGMQTR Oxidation (M) 1076.5437 0.54369929 1714 P53396 ACLY ATP-citrate synthase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 44.8 44.881 2 0.0024436 50921 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 95.909 77.874 1525800000 0 0 0 42880000 84656000 84951000 349610000 361410000 346730000 58240000 79757000 117560000 0 0 0 2624 1714 2401 22498;22499;22500;22501;22502;22503;22504;22505;22506 17802;17803;17804;17805;17806;17807;17808;17809;17810;17811;17812;17813;17814;17815;17816;17817;17818 17815 2770 16 AIVWGMQTR Unmodified 1060.5488 0.54878467 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 2 1 1 1 1 1 62.357 62.447 2 2.3303E-05 70981 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 147.34 116.67 2400800000 0 0 0 64449000 137440000 126790000 420060000 697000000 393910000 107100000 153940000 243390000 0 11808000 44935000 2625 1714 2401 22507;22508;22509;22510;22511;22512;22513;22514;22515;22516;22517;22518 17819;17820;17821;17822;17823;17824;17825;17826;17827;17828;17829;17830;17831;17832;17833;17834 17826 12 AIWAALQTQTSNAAK Unmodified 1572.826 0.82600539 4751 Q9NYU2 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes yes 0 0 0 By MS/MS 10 0 1 1 72.296 72.699 2 0.01392 83107 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.845 25.474 10090000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10090000 2626 4751 2402 22519 17835 17835 1 AIWGYCDQLK Unmodified 1252.591 0.59104341 3946 Q96P70 IPO9 Importin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 68.919 68.926 2 0.035248 78467 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.625 58.596 47595000 0 0 0 2349700 2595000 6387600 4246200 0 4496000 5503600 5607100 0 0 0 16409000 2627 3946 2403 22520;22521;22522;22523;22524;22525;22526;22527 17836;17837 17837 0 AIYAYALQVFPSK Unmodified 1469.7919 0.79185171 601 O94906 PRPF6 Pre-mRNA-processing factor 6 yes yes 0 0 0 By MS/MS 10 0 1 1 86.197 86.365 2 0.00072543 99839 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.555 57.348 4619500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4619500 2628 601 2404 22528 17838 17838 1 AIYDTPCIQAESEK Unmodified 1623.745 0.74503745 130 O00232 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 56.711 56.056 2 3.1157E-18 70169 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.69 113.99 422970000 0 49653000 0 22707000 36286000 31060000 12029000 14113000 10125000 55845000 61011000 58156000 15829000 19642000 36510000 2629 130 2405 22529;22530;22531;22532;22533;22534;22535;22536;22537;22538;22539;22540;22541;22542 17839;17840;17841;17842;17843;17844;17845;17846;17847;17848;17849 17841 11 AIYHDLEQSIR Unmodified 1343.6834 0.68336389 5030 Q9UNF0 PACSIN2 Protein kinase C and casein kinase substrate in neurons protein 2 yes yes 0 0 0 By MS/MS 10 0 1 1 52.342 53.019 3 0.0042975 59272 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.754 45.167 15484000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15484000 2630 5030 2406 22543 17850 17850 1 AIYHLEAFVAK Unmodified 1260.6867 0.68665836 1425 P40938 RFC3 Replication factor C subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.62 1.7 1 20 1 1 1 2 2 2 1 2 2 2 2 1 2 69.967 69.701 2;3 0.0028891 93193 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.727 40.492 201170000 16195000 0 0 3267800 4836400 18204000 10452000 12302000 12598000 17122000 13762000 25707000 14673000 11702000 40354000 2631 1425 2407 22544;22545;22546;22547;22548;22549;22550;22551;22552;22553;22554;22555;22556;22557;22558;22559;22560;22561;22562;22563;22564 17851;17852;17853;17854;17855 17854 4 AIYPFDGHNEGTLAMK Unmodified 1762.8349 0.83485551 2766 Q5T0N5 FNBP1L Formin-binding protein 1-like yes yes 0 0 0 By MS/MS 2 0 1 1 78.284 73.508 3 0.00017674 91634 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.842 84.842 43269000 0 43269000 0 0 0 0 0 0 0 0 0 0 0 0 0 2632 2766 2408 22565 17856;17857 17857 2 AIYPFDGHNEGTLAMK Oxidation (M) 1778.8298 0.82977013 2766 Q5T0N5 FNBP1L Formin-binding protein 1-like yes yes 0 1 0 By MS/MS 2 0 1 1 66.114 62.361 3 0.0026626 77525 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 47.037 40.911 12747000 0 0 12747000 0 0 0 0 0 0 0 0 0 0 0 0 2633 2766 2408 22566 17858 17858 4392 1 AIYQATYR Unmodified 984.50288 0.50288033 1231 P28074 PSMB5 Proteasome subunit beta type-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 33.364 33.668 2 0.0068826 35777 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 92.467 67.016 133090000 0 0 0 8304500 0 0 0 7231700 0 5049100 27115000 22412000 0 17223000 45757000 2634 1231 2409 22567;22568;22569;22570;22571;22572;22573 17859;17860;17861;17862 17861 4 AIYQVYNALQEK Unmodified 1438.7456 0.7456298 2473 Q15018 FAM175B BRISC complex subunit Abro1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.879 71.948 2 1.8618E-05 82068 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 120.45 106.25 62696000 0 0 0 2484100 2798200 4194600 2782100 3593000 2709600 6024200 5585400 6506800 3854900 6114700 16048000 2635 2473 2410 22574;22575;22576;22577;22578;22579;22580;22581;22582;22583;22584;22585 17863;17864;17865;17866;17867;17868;17869;17870;17871;17872 17866 10 AKECMAGTSGSEEVK Unmodified 1582.6967 0.69670705 3151 Q86UP2 KTN1 Kinectin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 6.6764 6.8336 3 0.004047 4664 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 29.981 16.568 184090000 0 0 0 0 0 0 26501000 24182000 44781000 31563000 0 0 0 57065000 0 2636 3151 2411 22586;22587;22588;22589;22590 17873;17874;17875;17876;17877 17873 5 AKECMAGTSGSEEVKVLEHK Unmodified 2189.0457 0.045652924 3151 Q86UP2 KTN1 Kinectin yes yes 0 0 2 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 23.643 23.854 5 0.023893 24965 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 12.663 2.287 83095000 0 0 0 625640 1991200 2628200 3648600 4394100 0 4489700 7425000 17608000 6766400 7885800 25632000 2637 3151 2412 22591;22592;22593;22594;22595;22596;22597;22598;22599;22600;22601 17878 17878 1 AKFDAELLEIK Unmodified 1275.7075 0.70745338 4391 Q9H446 RWDD1 RWD domain-containing protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 82.181 74.05 3 0.004997 96909 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.267 36.523 11947000 11947000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2638 4391 2413 22602 17879 17879 1 AKPAMPQDSVPSPR Unmodified 1479.7504 0.7503976 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 19 2 2 2 2 2 2 2 2 2 1 37.92 38.042 2;3 4.2345E-13 42345 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 99.991 94.271 1647900000 0 0 0 61685000 119600000 26291000 404550000 553380000 159770000 56183000 94429000 166260000 0 0 5803600 2639 1714 2414 22603;22604;22605;22606;22607;22608;22609;22610;22611;22612;22613;22614;22615;22616;22617;22618;22619;22620;22621 17880;17881;17882;17883;17884;17885;17886;17887;17888;17889;17890;17891;17892;17893 17882 11 AKPAMPQDSVPSPR Oxidation (M) 1495.7453 0.74531222 1714 P53396 ACLY ATP-citrate synthase yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 26 3 3 1 3 3 3 3 2 3 1 1 26.821 26.962 2;3 1.1482E-08 29203 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 96.464 89.296 1428300000 0 0 0 61618000 101170000 21617000 403480000 312730000 228810000 52162000 46492000 190450000 0 3343000 6471100 2640 1714 2414 22622;22623;22624;22625;22626;22627;22628;22629;22630;22631;22632;22633;22634;22635;22636;22637;22638;22639;22640;22641;22642;22643;22644;22645;22646;22647 17894;17895;17896;17897;17898;17899;17900;17901;17902;17903;17904;17905;17906;17907;17908;17909;17910;17911 17896 2771 9 AKPPPGGGEQEPPPPPAPQDVEMK Oxidation (M) 2465.1897 0.18967462 308 O43242 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8 3.28 1 2 8 1 2 1 1 1 1 2 1 1 45.184 43.701 3 7.1034E-15 49049 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 72.158 64.166 259780000 370660 71366000 0 19395000 22704000 29506000 0 0 0 28503000 30209000 49422000 0 0 8305700 2641 308 2415 22648;22649;22650;22651;22652;22653;22654;22655;22656;22657;22658 17912;17913;17914;17915;17916;17917;17918;17919;17920;17921;17922;17923;17924 17922 397 13 AKPPPGGGEQEPPPPPAPQDVEMK Unmodified 2449.1948 0.19476 308 O43242 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 2 2 1 1 1 1 1 1 1 1 1 1 53.684 52.335 3 3.8356E-14 66272 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.477 76.928 425890000 8567200 123300000 0 12585000 20789000 29799000 0 9333700 6173300 55684000 62104000 56161000 0 14065000 27324000 2642 308 2415 22659;22660;22661;22662;22663;22664;22665;22666;22667;22668;22669;22670;22671;22672 17925;17926;17927;17928;17929;17930;17931;17932;17933;17934;17935;17936;17937;17938;17939;17940;17941;17942;17943;17944;17945;17946;17947;17948;17949 17928 24 AKPSPAPPSTTTAPDASGPQK Unmodified 2005.0116 0.011633904 1421 P40855 PEX19 Peroxisomal biogenesis factor 19 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 30.06 29.523 3 1.6043E-13 37561 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.543 89.496 167840000 0 46969000 0 6276900 4600900 2798300 7883500 0 4743800 8207400 15980000 16042000 10954000 16591000 26798000 2643 1421 2416 22673;22674;22675;22676;22677;22678;22679;22680;22681;22682;22683;22684;22685 17950;17951;17952;17953;17954;17955 17952 6 AKPTSDKPGSPYR Unmodified 1402.7205 0.72047768 403 O60488 ACSL4 Long-chain-fatty-acid--CoA ligase 4 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 9.2761 9.4101 3 0.0080488 5991 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 67.275 54.469 377780000 0 0 0 19850000 22410000 14463000 34065000 27592000 13109000 23450000 76521000 65215000 30039000 20608000 30455000 2644 403 2417 22686;22687;22688;22689;22690;22691;22692;22693;22694;22695;22696;22697 17956;17957;17958;17959;17960;17961 17958 3 AKPVNSKPDSAYR Unmodified 1431.747 0.74702678 670 O95573 ACSL3 Long-chain-fatty-acid--CoA ligase 3 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 8.7181 8.8253 3 0.0076909 6588 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 68.034 60.278 159630000 0 0 0 10616000 12452000 6666100 15597000 7777700 7443500 14450000 0 41608000 16666000 13124000 13232000 2645 670 2418 22698;22699;22700;22701;22702;22703;22704;22705;22706;22707;22708 17962;17963;17964;17965;17966;17967 17962 3 AKPYEGSILEADCDILIPAASEK Unmodified 2489.236 0.23595611 721 P00367 GLUD1 Glutamate dehydrogenase 1, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.33 0.471 2 1 1 1 1 87.538 82.946 3 0.0032505 101562 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 34.914 23.925 14403000 6680300 4839900 2882900 0 0 0 0 0 0 0 0 0 0 0 0 2646 721 2419 22709;22710;22711 17968;17969;17970;17971;17972 17972 5 AKQEELEAALQR Unmodified 1384.731 0.73104237 69;88 CON__P08729;CON__Q3KNV1;P08729 KRT7 Keratin, type II cytoskeletal 7 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 42.761 42.94 3 0.00055928 47310 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.881 52.486 + 240560000 0 0 0 18106000 13998000 17408000 20454000 10634000 0 18036000 32990000 32121000 33411000 20268000 23138000 2647 69;88 2420 22712;22713;22714;22715;22716;22717;22718;22719;22720;22721;22722 17973;17974;17975;17976;17977;17978;17979;17980;17981;17982;17983;17984 17981 11 AKWDAWNELK Unmodified 1259.6299 0.62987176 835 P07108 DBI Acyl-CoA-binding protein yes yes 0 0 1 By MS/MS 2 0 2 2 75.933 67.803 2;3 0.0058332 89467 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.957 68.23 97819000 97819000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2648 835 2421 22723;22724 17985;17986 17986 1 ALAAADRLQK Unmodified 1055.6087 0.60874239 644 O95352 ATG7 Ubiquitin-like modifier-activating enzyme ATG7 yes yes 0 0 1 By MS/MS 2 0 1 1 30.277 24.558 2 0.011998 34529 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 108.3 42.829 38189000 38189000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2649 644 2422 22725 17987 17987 1 ALAAAGYDVEK Unmodified 1106.5608 0.56078914 1038;920 P10412;P16402;P22492;Q02539;P16403 HIST1H1E;HIST1H1D;HIST1H1T;HIST1H1A;HIST1H1C Histone H1.4;Histone H1.3;Histone H1t;Histone H1.1;Histone H1.2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 2 2 1 1 1 1 1 1 1 1 1 1 1 1 41.533 40.231 2 3.0126E-05 45231 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 118.18 75.579 2375800000 52367000 795800000 11795000 69208000 71789000 99750000 85975000 72301000 76463000 138080000 168370000 202010000 190860000 134050000 206940000 2650 920;1038 2423 22726;22727;22728;22729;22730;22731;22732;22733;22734;22735;22736;22737;22738;22739;22740;22741;22742 17988;17989;17990;17991;17992;17993;17994;17995;17996;17997;17998;17999;18000;18001;18002;18003;18004;18005;18006;18007;18008 17991 20 ALAAEEIR Unmodified 871.47633 0.47633123 3983 Q96S55 WRNIP1 ATPase WRNIP1 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.355 32.539 2 0.011381 35665 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 77.058 16.27 279280000 0 0 0 12800000 14349000 19289000 18265000 13478000 14711000 24169000 34516000 46996000 25635000 19148000 35922000 2651 3983 2424 22743;22744;22745;22746;22747;22748;22749;22750;22751;22752;22753;22754 18009;18010;18011;18012;18013 18011 4 ALAAGGVGSIVR Unmodified 1069.6244 0.62439245 289 O15511 ARPC5 Actin-related protein 2/3 complex subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 56.531 56.651 2 0.0063518 65368 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 51.445 16.638 124130000 0 0 0 9713100 6624000 10383000 12077000 0 8069800 10021000 17499000 14233000 9827100 7653600 18025000 2652 289 2425 22755;22756;22757;22758;22759;22760;22761;22762;22763;22764;22765 18014;18015;18016;18017;18018;18019;18020;18021;18022 18021 7 ALAAGGYDVEK Unmodified 1092.5451 0.54513908 1037 P16401 HIST1H1B Histone H1.5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 38.207 37.454 2 0.00033396 42289 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 100.25 85.095 812370000 15352000 290790000 0 35865000 30286000 32695000 35984000 0 29556000 49732000 46743000 65871000 58405000 46462000 74629000 2653 1037 2426 22766;22767;22768;22769;22770;22771;22772;22773;22774;22775;22776;22777;22778 18023;18024;18025;18026;18027;18028;18029;18030;18031;18032;18033;18034;18035;18036;18037 18036 14 ALAAPAAEEK Unmodified 969.51311 0.51311067 2059 Q01650 SLC7A5 Large neutral amino acids transporter small subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 2 1 1 1 1 1 22.822 23.121 2 0.0020595 24621 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 86.67 66.824 382230000 0 0 0 30844000 0 36012000 0 0 0 54240000 66436000 118750000 0 0 75950000 2654 2059 2427 22779;22780;22781;22782;22783;22784;22785;22786 18038;18039;18040;18041;18042;18043;18044;18045 18043 5 ALAAQLPVLPR Unmodified 1147.7077 0.70772815 3855 Q96GK7 FAHD2A Fumarylacetoacetate hydrolase domain-containing protein 2A yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 79.132 79.313 2 0.018653 91264 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.207 52.252 8197600 0 0 0 0 0 0 0 0 0 0 0 0 0 1657500 6540100 2655 3855 2428 22787;22788 18046 18046 0 ALAAQNIVEDMEQR Unmodified 1586.7723 0.77225526 2599 Q16222 UAP1 UDP-N-acetylhexosamine pyrophosphorylase;UDP-N-acetylgalactosamine pyrophosphorylase;UDP-N-acetylglucosamine pyrophosphorylase yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 78.915 79.052 2 1.2652E-07 90990 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 113.22 85.895 38922000 0 0 0 0 0 2973900 0 2750600 0 3863100 0 7715300 0 4644500 16975000 2656 2599 2429 22789;22790;22791;22792;22793;22794 18047;18048;18049 18048 2 ALAAVPSAGSVQR Unmodified 1225.6779 0.67788459 2381 Q14160 SCRIB Protein scribble homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.852 46.021 2 0.00078057 51625 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 70.552 41.39 251590000 0 0 0 12825000 13651000 19019000 17910000 18817000 14531000 20534000 24218000 29340000 27094000 19133000 34521000 2657 2381 2430 22795;22796;22797;22798;22799;22800;22801;22802;22803;22804;22805;22806 18050;18051;18052;18053;18054;18055;18056;18057;18058;18059;18060;18061;18062 18052 13 ALADDDFLTVTGK Unmodified 1364.6824 0.68236084 1332 P33991 MCM4 DNA replication licensing factor MCM4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.338 76.387 2 5.6175E-08 87199 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 101.95 83.174 454550000 0 0 0 18821000 21185000 34516000 0 28819000 20384000 35888000 67059000 54568000 25960000 50324000 97028000 2658 1332 2431 22807;22808;22809;22810;22811;22812;22813;22814;22815;22816;22817;22818 18063;18064;18065;18066;18067;18068;18069;18070;18071;18072;18073;18074 18070 12 ALADENEFVR Unmodified 1162.5619 0.56185177 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 50.574 50.728 2 0.00055195 57362 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 128.38 74.178 403280000 0 0 0 35570000 28651000 45938000 27111000 21289000 0 35989000 31811000 43734000 38500000 36419000 58268000 2659 3641 2432 22819;22820;22821;22822;22823;22824;22825;22826;22827;22828;22829 18075;18076;18077;18078;18079;18080;18081;18082;18083;18084;18085;18086;18087;18088 18076 14 ALADEREAVQK Unmodified 1228.6412 0.64116473 2047;241 Q01082;O15020 SPTBN1;SPTBN2 Spectrin beta chain, non-erythrocytic 1;Spectrin beta chain, non-erythrocytic 2 no no 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7 3.87 6 10 2 2 2 1 1 1 1 1 1 1 1 1 1 21.164 19.831 2;3 0.0028365 27133 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 102.07 54.464 230010000 31485000 134430000 31264000 0 1476400 3256100 1454400 2810700 0 3482900 6222500 3702800 3027700 2148900 5252400 2660 2047;241 2433 22830;22831;22832;22833;22834;22835;22836;22837;22838;22839;22840;22841;22842;22843;22844;22845 18089;18090;18091;18092;18093;18094;18095;18096 18092 6 ALADHSMAQTPR Unmodified 1296.6245 0.62446881 863 P08240 SRPR Signal recognition particle receptor subunit alpha yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 24.549 24.685 3 0.020524 26607 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 47.039 39.66 44612000 0 0 0 6250300 5802200 5366500 0 7438500 0 5931400 7456300 6366800 0 0 0 2661 863 2434 22846;22847;22848;22849;22850;22851;22852 18097;18098 18097 1 ALADIVIPQEYGITK Unmodified 1629.8978 0.89777334 317 O43314 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 1 1 6 2 1 1 1 1 1 1 85.609 84.717 2 0.0074378 105095 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.88 88.615 76855000 0 56576000 0 0 0 0 2337200 2610000 0 4299200 3688000 0 0 2295600 5049800 2662 317 2435 22853;22854;22855;22856;22857;22858;22859;22860 18099;18100 18099 1 ALADLIEK Unmodified 871.50148 0.50148335 675 O95628 CNOT4 CCR4-NOT transcription complex subunit 4 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 12 1 1 2 1 2 1 1 1 1 1 61.053 61.208 2 0.018652 70003 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 64.265 14.138 159400000 0 0 0 10318000 0 8791200 14523000 12585000 10639000 15345000 16712000 16841000 0 16063000 37581000 2663 675 2436 22861;22862;22863;22864;22865;22866;22867;22868;22869;22870;22871;22872 18101;18102;18103;18104;18105;18106 18102 6 ALADVATVLGR Unmodified 1084.6241 0.6240581 3619 Q92542 NCSTN Nicastrin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 76.312 76.238 2 0.0002916 88466 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 93.649 54.396 15943000 0 0 0 5308600 0 0 0 7092700 0 0 0 0 3541300 0 0 2664 3619 2437 22873;22874;22875 18107;18108;18109 18109 3 ALADYIR Unmodified 820.4443 0.44430282 4123 Q9BS26 ERP44 Endoplasmic reticulum resident protein 44 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.537 52.68 2 0.048847 59732 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 64.803 0 135240000 0 0 0 6726000 6855800 10828000 9645200 9340900 5549900 11119000 13695000 17557000 8709900 11571000 23645000 2665 4123 2438 22876;22877;22878;22879;22880;22881;22882;22883;22884;22885;22886;22887 18110;18111 18110 2 ALAEAADVGAQMIK Oxidation (M) 1402.7126 0.71261511 4415 Q9H6E5 TUT1 Speckle targeted PIP5K1A-regulated poly(A) polymerase yes yes 0 1 0 By MS/MS 2 0 1 1 55.615 49.8 2 4.7513E-13 64418 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.7 72.003 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2666 4415 2439 22888 18112 18112 5870 1 ALAEAADVGAQMIK Unmodified 1386.7177 0.71770049 4415 Q9H6E5 TUT1 Speckle targeted PIP5K1A-regulated poly(A) polymerase yes yes 0 0 0 By MS/MS By MS/MS 7.33 3.77 1 2 1 2 70.698 69.98 2 1.7898E-16 79822 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 114.89 93.522 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2667 4415 2439 22889;22890;22891 18113;18114;18115 18113 3 ALAEAQAQLQESSQK Unmodified 1600.8057 0.80566387 2938 Q6P5Z2 PKN3 Serine/threonine-protein kinase N3 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 6 1 1 1 1 1 1 39.444 39.49 2 0.025666 42742 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 49.978 39.67 21183000 0 0 0 1985300 3164800 0 3806200 0 0 3819800 0 0 0 2963800 5443100 2668 2938 2440 22892;22893;22894;22895;22896;22897 18116 18116 1 ALAEDATVYEYDSIYDEMQK Unmodified 2353.0308 0.030773946 4327 Q9H0G5 NSRP1 Nuclear speckle splicing regulatory protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 89.243 81.113 3 0.010856 105481 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 29.311 25.579 7240800 7240800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2669 4327 2441 22898 18117 18117 1 ALAEEVEQVHR Unmodified 1279.6521 0.65206377 4094 Q9BQE5 APOL2 Apolipoprotein L2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 2 1 1 2 1 1 1 1 1 1 2 39.19 39.362 2;3 5.6858E-06 43729 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 141.48 114.23 845010000 0 0 0 52347000 59434000 39910000 57781000 103190000 38167000 65392000 71505000 106890000 91126000 65409000 93862000 2670 4094 2442 22899;22900;22901;22902;22903;22904;22905;22906;22907;22908;22909;22910;22911;22912;22913 18118;18119;18120;18121;18122;18123;18124;18125;18126;18127;18128;18129;18130 18125 13 ALAEFEEK Unmodified 935.46001 0.46001246 2720 Q5BKY9;Q8N9E0 FAM133B;FAM133A Protein FAM133B;Protein FAM133A yes no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.676 37.857 2 0.011003 41174 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 77.923 54.399 105580000 0 0 0 7433400 7602300 7310200 9828100 6856000 6979400 9875500 11683000 10596000 12187000 5686100 9544600 2671 2720 2443 22914;22915;22916;22917;22918;22919;22920;22921;22922;22923;22924;22925 18131;18132;18133;18134;18135;18136 18135 6 ALAEGQQR Unmodified 871.45118 0.45117911 2927 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 6.8463 6.9381 2 0.035209 4855 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 52.636 33.854 14620000 0 0 0 0 2160600 2498600 2182600 3150300 2295500 0 0 0 0 0 2332700 2672 2927 2444 22926;22927;22928;22929;22930;22931 18137 18137 1 ALAEGVLLR Unmodified 940.57057 0.57056597 1547 P48637 GSS Glutathione synthetase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 63.313 63.409 2 0.003216 71321 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.777 47.862 126770000 0 0 0 12015000 3526200 0 4108900 5222800 0 0 16984000 17538000 4809300 11958000 50604000 2673 1547 2445 22932;22933;22934;22935;22936;22937;22938;22939;22940 18138;18139;18140;18141;18142;18143;18144 18139 7 ALAENSGVK Unmodified 887.47125 0.47124585 1641 P50990 CCT8 T-complex protein 1 subunit theta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 12.079 11.37 2 0.0033419 9796 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.37 37.733 1612000000 37833000 714570000 9630400 58066000 35590000 82117000 54274000 53040000 41901000 80945000 76321000 103840000 64858000 58886000 140110000 2674 1641 2446 22941;22942;22943;22944;22945;22946;22947;22948;22949;22950;22951;22952;22953;22954;22955;22956 18145;18146;18147;18148;18149;18150;18151;18152;18153;18154;18155;18156;18157;18158 18149 11 ALAESWNAAFLESSAK Unmodified 1693.8312 0.83115034 2524 Q15382 RHEB GTP-binding protein Rheb yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 84.261 82.626 2 1.5518E-23 95586 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 121.28 99.082 99670000 15451000 32235000 7497100 0 1985300 5398100 0 4341300 3540500 6513400 6711900 0 0 0 15996000 2675 2524 2447 22957;22958;22959;22960;22961;22962;22963;22964;22965;22966;22967;22968;22969 18159;18160;18161;18162;18163;18164;18165;18166;18167;18168;18169;18170;18171 18162 13 ALAETGIAVPSYYNPAAVNPMK Oxidation (M) 2292.146 0.1460189 3049 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 2 1 2 2 2 2 2 2 2 2 1 81.187 81.265 2;3 1.2482E-54 94156 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 117.03 99.828 296700000 0 0 0 4723100 26022000 11369000 26618000 23961000 25909000 45099000 30413000 37192000 19512000 29718000 16166000 2676 3049 2448 22970;22971;22972;22973;22974;22975;22976;22977;22978;22979;22980;22981;22982;22983;22984;22985;22986;22987;22988;22989;22990 18172;18173;18174;18175;18176;18177;18178;18179;18180;18181;18182;18183;18184;18185 18183 4674 14 ALAFEQLLK Unmodified 1031.6015 0.60153174 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 85.363 84.686 2 0.0038025 97702 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 96.492 19.209 363810000 0 28632000 5359900 20027000 0 41288000 47750000 0 0 56458000 49042000 64107000 0 44726000 6418700 2677 2556 2449 22991;22992;22993;22994;22995;22996;22997;22998;22999;23000 18186;18187;18188;18189;18190;18191 18187 6 ALAFYAVR Unmodified 909.50724 0.50723743 3918 Q96LD4 TRIM47 Tripartite motif-containing protein 47 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 65.493 65.534 2 0.027845 74665 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.102 25.799 24809000 0 0 0 1375000 2213800 0 2801200 0 0 0 0 4721700 2941300 3372600 7383300 2678 3918 2450 23001;23002;23003;23004;23005;23006;23007 18192 18192 1 ALAGCDFLTISPK Unmodified 1391.7119 0.71188683 1392 P37837 TALDO1 Transaldolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 81.288 79.883 2 5.9001E-08 92736 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 119.53 88.455 2136800000 41234000 1904900000 26978000 6399900 1716800 0 0 0 2505300 3411600 22751000 21881000 3349100 18832000 82782000 2679 1392 2451 23008;23009;23010;23011;23012;23013;23014;23015;23016;23017;23018;23019;23020;23021 18193;18194;18195;18196;18197;18198;18199;18200;18201;18202;18203;18204;18205 18198 13 ALAGVTYAAK Unmodified 963.53893 0.53893149 5070 Q9UQB8 BAIAP2 Brain-specific angiogenesis inhibitor 1-associated protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 39.151 38.337 2 0.0092228 49009 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.825 55.054 55774000 0 22910000 0 4409400 0 3284100 3031800 2663200 0 5325200 0 5204000 4537500 0 4408400 2680 5070 2452 23022;23023;23024;23025;23026;23027;23028;23029;23030;23031 18206;18207;18208;18209;18210;18211;18212;18213 18210 8 ALAIYEGQLGPDNPNVAR Unmodified 1896.9694 0.96937516 4629 Q9NSK0 KLC4 Kinesin light chain 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 2 2 2 1 75.17 75.218 2;3 1.5348E-38 86350 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 171.05 165.11 162380000 0 0 0 8204900 9571300 11006000 12402000 12127000 10184000 17267000 18073000 22251000 13468000 9822000 18006000 2681 4629 2453 23032;23033;23034;23035;23036;23037;23038;23039;23040;23041;23042;23043;23044;23045;23046;23047;23048;23049;23050;23051;23052;23053;23054 18214;18215;18216;18217;18218;18219;18220;18221;18222;18223;18224;18225;18226;18227;18228;18229;18230 18219 14 ALALECERVK Unmodified 1187.6332 0.63324258 4264 Q9BZF9 UACA Uveal autoantigen with coiled-coil domains and ankyrin repeats yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 43.296 38.03 3 0.025454 52324 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 39.873 27.297 22323000 13527000 0 8796300 0 0 0 0 0 0 0 0 0 0 0 0 2682 4264 2454 23055;23056 18231;18232 18231 1 ALALNCFAPINDQEGAEAK Unmodified 2030.9731 0.97313991 4002 Q96T88 UHRF1 E3 ubiquitin-protein ligase UHRF1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.083 80.141 2 9.4111E-50 92768 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 138.42 130.05 82941000 0 0 0 3520600 3854100 6886900 4049000 4632800 6111500 8744700 10471000 10023000 6578300 5872500 12196000 2683 4002 2455 23057;23058;23059;23060;23061;23062;23063;23064;23065;23066;23067;23068 18233;18234;18235;18236;18237;18238;18239;18240;18241;18242;18243;18244 18242 12 ALAMAESTEK Unmodified 1049.5063 0.50631073 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 25.669 25.105 2 0.00055195 25438 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 128.38 95.773 249370000 3002700 88077000 0 0 8372700 17619000 8909300 8063200 6823000 15195000 13271000 15827000 14590000 17980000 31635000 2684 3119 2456 23069;23070;23071;23072;23073;23074;23075;23076;23077;23078;23079;23080;23081 18245;18246;18247;18248;18249;18250;18251;18252;18253;18254;18255;18256;18257;18258;18259;18260;18261;18262;18263 18250 18 ALAMAESTEK Oxidation (M) 1065.5012 0.50122535 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 1 0 By MS/MS 2 0 1 1 13.554 10.24 2 0.018493 13847 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.299 50.155 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2685 3119 2456 23082 18264 18264 4723 1 ALAMPGRPESPPVFR Unmodified 1623.8555 0.85553137 2839 Q63ZY3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 69.584 69.72 3 0.00094189 79485 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.643 40.204 43516000 0 0 0 0 2042100 3287500 2257600 3238800 0 6505800 6013500 5927800 2414700 5138600 6690100 2686 2839 2457 23083;23084;23085;23086;23087;23088;23089;23090;23091;23092 18265;18266;18267;18268 18266 4 ALANSLACQGK Unmodified 1131.5706 0.57064232 771 P04075 ALDOA Fructose-bisphosphate aldolase A yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 30.091 30.313 2 0.00022128 32438 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 106.6 52.394 210140000 0 0 0 9108900 4060400 0 4952200 0 0 9390600 34709000 37001000 7734100 32889000 70292000 2687 771 2458 23093;23094;23095;23096;23097;23098;23099;23100;23101;23102;23103 18269;18270;18271;18272;18273;18274;18275;18276;18277;18278;18279;18280 18275 12 ALANVNIGSLICNVGAGGPAPAAGAAPAGGPAPSTAAAPAEEK Unmodified 3807.9214 0.92138569 806 P05386 RPLP1 60S acidic ribosomal protein P1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 1 2 1 2 2 2 1 2 2 90.335 90.43 3;4 1.6275E-36 104814 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.006 51.647 200560000 0 0 0 1387600 2600800 0 0 9053000 3015800 33785000 27486000 20767000 1908500 12940000 87617000 2688 806 2459 23104;23105;23106;23107;23108;23109;23110;23111;23112;23113;23114;23115;23116;23117;23118;23119 18281;18282;18283;18284;18285;18286;18287;18288;18289;18290 18283 10 ALAPEYAK Unmodified 861.45962 0.45961853 838 P07237 P4HB Protein disulfide-isomerase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 7.12 3.72 2 1 5 2 1 1 1 1 1 1 28.446 27.075 2 0.010495 28360 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.469 22.188 4814300000 0 4306900000 68904000 0 29534000 22691000 25364000 0 0 0 0 132150000 0 0 228760000 2689 838 2460 23120;23121;23122;23123;23124;23125;23126;23127 18291;18292;18293;18294;18295 18292 3 ALAPPDVHHER Unmodified 1240.6313 0.63126874 3430 Q8NEW0 SLC30A7 Zinc transporter 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 24.515 24.616 3 0.011741 26546 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 36.847 29.28 14388000 0 0 0 0 5609800 0 0 4367400 0 0 4411000 0 0 0 0 2690 3430 2461 23128;23129;23130 18296 18296 1 ALAPTWEQLALGLEHSETVK Unmodified 2192.1477 0.14773345 3402 Q8NBS9 TXNDC5 Thioredoxin domain-containing protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.14 0.639 1 4 2 3 3 1 98.956 95.864 3 3.4494E-100 116386 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 172.84 160.18 509620000 231920000 274490000 3202000 0 0 0 0 0 0 0 0 0 0 0 0 2691 3402 2462 23131;23132;23133;23134;23135;23136;23137 18297;18298;18299;18300;18301;18302;18303;18304;18305;18306 18299 10 ALAQEDQGAGEVER Unmodified 1471.6903 0.69029976 241 O15020 SPTBN2 Spectrin beta chain, non-erythrocytic 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 27.47 27.751 2 1.1008E-05 28883 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 113.69 97.016 45359000 0 0 0 4785700 0 4287900 0 4979700 0 6245300 6690700 5484000 0 4644600 8240900 2692 241 2463 23138;23139;23140;23141;23142;23143;23144;23145;23146;23147 18307;18308;18309;18310;18311;18312;18313;18314;18315;18316 18310 9 ALAQEDQGAGEVERTSRAVEEK Unmodified 2372.1568 0.15679459 241 O15020 SPTBN2 Spectrin beta chain, non-erythrocytic 2 yes yes 0 0 2 By MS/MS 2 0 1 1 47.32 43.439 4 0.00040609 54647 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 41.136 34.035 18388000 0 0 18388000 0 0 0 0 0 0 0 0 0 0 0 0 2693 241 2464 23148 18317 18317 1 ALAQLSLSR Unmodified 957.56073 0.56072956 2991 Q6XQN6 NAPRT Nicotinate phosphoribosyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.536 55.665 2 0.0099506 63375 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 65.252 19.534 198030000 0 0 0 10223000 5906000 10724000 9030600 10511000 5888700 12293000 25543000 24560000 10574000 21084000 51694000 2694 2991 2465 23149;23150;23151;23152;23153;23154;23155;23156;23157;23158;23159;23160 18318;18319;18320;18321;18322;18323;18324;18325 18318 5 ALASGTEASSTDPGAPGGPGGAEGPMAK Oxidation (M) 2456.1125 0.11254652 2632 Q16763 UBE2S Ubiquitin-conjugating enzyme E2 S yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 42.341 42.62 3 1.4041E-18 47668 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 61.602 58.446 31401000 0 0 0 0 0 9457200 7786000 0 0 0 0 0 0 5715400 8442600 2695 2632 2466 23161;23162;23163;23164 18326;18327;18328 18326 4286 3 ALASLMTYK Unmodified 996.5314 0.53140327 721 P00367;P49448 GLUD1;GLUD2 Glutamate dehydrogenase 1, mitochondrial;Glutamate dehydrogenase 2, mitochondrial yes no 0 0 0 By matching By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 63.427 63.689 2 0.013016 72870 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 60.436 20.338 15791000 0 0 0 0 0 0 4115900 6169900 2702300 0 0 0 0 0 2802700 2696 721 2467 23165;23166;23167;23168 18329;18330;18331 18331 3 ALASPEQLAQLPSSGVPR Unmodified 1819.9792 0.97921156 5172 Q9Y3Q8 TSC22D4 TSC22 domain family protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.838 79.897 2 1.3495E-19 92495 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 125.61 109.98 60777000 0 0 0 3447600 3560800 4346000 3848100 4535000 3241700 5436400 5246300 6594400 4783100 5906700 9831200 2697 5172 2468 23169;23170;23171;23172;23173;23174;23175;23176;23177;23178;23179;23180 18332;18333;18334;18335;18336;18337;18338;18339;18340;18341;18342;18343 18337 12 ALASQLQDSLK Unmodified 1172.6401 0.6401021 1073 P18206 VCL Vinculin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 57.758 57.876 2 4.4356E-09 64917 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 138.98 101.16 703260000 0 0 0 42361000 18626000 77178000 35634000 32741000 22415000 55407000 71173000 76272000 42110000 62958000 166390000 2698 1073 2469 23181;23182;23183;23184;23185;23186;23187;23188;23189;23190;23191;23192 18344;18345;18346;18347;18348;18349;18350;18351;18352;18353;18354;18355 18347 10 ALASSGFK Unmodified 779.41775 0.41775372 3213 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 24.093 23.507 2 0.0059379 30969 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.16 52.597 516130000 0 96760000 0 27450000 30403000 30773000 0 0 0 51451000 54417000 63392000 52261000 44274000 64949000 2699 3213 2470 23193;23194;23195;23196;23197;23198;23199;23200;23201;23202;23203;23204 18356;18357;18358;18359;18360;18361;18362;18363 18358 8 ALASTCKPELQK Unmodified 1344.7071 0.7071358 4275 Q9BZQ8 FAM129A Protein Niban yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.42 3.66 3 1 8 1 2 1 1 1 1 1 1 1 1 1 28.493 27.152 3 0.0023109 28778 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 47.429 35.161 121420000 29923000 30637000 7660600 0 1549400 0 3989100 0 0 8735800 8147100 8863800 6968100 7534900 7414400 2700 4275 2471 23205;23206;23207;23208;23209;23210;23211;23212;23213;23214;23215;23216 18364;18365;18366;18367;18368;18369 18364 6 ALATHPGISFYEEPR Unmodified 1686.8366 0.83657007 2189 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.445 64.534 3 6.7133E-10 73808 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 93.237 87.074 169460000 0 0 0 7892600 6252300 17730000 8786300 8110400 9468500 19211000 18327000 14278000 12049000 14055000 33302000 2701 2189 2472 23217;23218;23219;23220;23221;23222;23223;23224;23225;23226;23227;23228 18370;18371;18372;18373;18374;18375;18376 18370 7 ALATNPALR Unmodified 925.53451 0.53451481 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 34.479 34.705 2 0.011176 38163 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 63.21 19.396 51845000 0 0 0 0 3666500 0 4726200 0 3750900 0 11955000 0 9041500 7621100 11085000 2702 2775 2473 23229;23230;23231;23232;23233;23234;23235 18377 18377 1 ALATSSINMK Unmodified 1034.543 0.54303059 3418 Q8NDI1 EHBP1 EH domain-binding protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS 7.33 3.77 1 2 1 1 1 41.29 40.014 2 0.0026343 51466 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.51 77.84 37093000 0 22144000 0 0 0 0 0 0 0 0 0 6359300 0 0 8590300 2703 3418 2474 23236;23237;23238 18378;18379;18380 18378 3 ALAVGGLGSIIR Unmodified 1125.687 0.68699271 4080 Q9BPX5 ARPC5L Actin-related protein 2/3 complex subunit 5-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 82.078 82.157 2 0.037029 95186 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 35.541 18.765 28767000 0 0 0 1358900 0 2075700 1602600 0 958880 3188500 4670300 4878700 1819600 1970900 6243100 2704 4080 2475 23239;23240;23241;23242;23243;23244;23245;23246;23247;23248 18381 18381 1 ALAVMVDHLESEK Unmodified 1440.7283 0.72826518 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 64.642 64.459 3 0.0058989 72691 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.981 32.793 67663000 0 0 6298800 0 0 7356700 0 9733400 6250800 0 6176200 13521000 3984200 5815300 8526900 2705 2361 2476 23249;23250;23251;23252;23253;23254;23255;23256;23257 18382;18383;18384;18385 18382 4 ALAVVYGPHEIR Unmodified 1323.7299 0.72992016 4546 Q9NPD3 EXOSC4 Exosome complex component RRP41 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 56.263 56.378 3 0.032912 63882 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 32.295 28.65 86836000 0 0 0 4926600 4177700 6238900 7760900 5796300 3817600 8380200 11708000 9363300 0 8919000 15747000 2706 4546 2477 23258;23259;23260;23261;23262;23263;23264;23265;23266;23267;23268 18386 18386 1 ALAYFEQLK Unmodified 1081.5808 0.5807963 344 O43592 XPOT Exportin-T yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.852 72.915 2 0.010514 83161 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.207 47.734 178320000 0 0 0 7236100 6865000 21313000 8525200 9817200 5314800 22035000 16494000 14502000 9426300 11527000 45267000 2707 344 2478 23269;23270;23271;23272;23273;23274;23275;23276;23277;23278;23279;23280 18387;18388;18389;18390;18391 18388 5 ALCAEADRLQQSHPLSATQIQVK Unmodified 2563.3177 0.3176691 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 2 66.259 65.615 3;4 0.00040575 74285 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.28 30.168 88030000 19530000 0 0 0 0 7112200 0 0 3308400 5515600 5908100 11478000 0 4212100 30966000 2708 2344 2479 23281;23282;23283;23284;23285;23286;23287;23288;23289 18392;18393;18394;18395;18396 18394 5 ALCATRQEPLLIGSTK Unmodified 1756.9506 0.95055397 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 1 2 2 1 2 2 2 2 1 2 2 59.767 59.898 2;3 5.102E-06 67265 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.911 57.994 542300000 0 0 0 22326000 9925800 59159000 29559000 23803000 20527000 52926000 65141000 72337000 23815000 50918000 111860000 2709 1565 2480 23290;23291;23292;23293;23294;23295;23296;23297;23298;23299;23300;23301;23302;23303;23304;23305;23306;23307;23308;23309;23310 18397;18398;18399;18400;18401;18402;18403;18404;18405;18406;18407;18408;18409 18401 13 ALCDNVDTR Unmodified 1062.4764 0.47640759 1579 P49589 CARS Cysteine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 21.704 22.165 2 0.013982 23010 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 58.981 36.85 39078000 0 0 0 0 0 0 0 0 0 0 4787100 7945800 17522000 8822300 0 2710 1579 2481 23311;23312;23313;23314 18410;18411 18410 2 ALCDPLEEVR Unmodified 1200.5809 0.58087266 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.146 68.227 2 0.0061036 78215 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 66.27 50.067 71558000 0 0 0 3105600 3187700 6645300 3321800 2899100 2802800 7963800 6105200 10003000 5997500 7160100 12367000 2711 3641 2482 23315;23316;23317;23318;23319;23320;23321;23322;23323;23324;23325;23326 18412;18413;18414;18415;18416;18417;18418;18419;18420 18413 9 ALCDPLEEVREAAAK Unmodified 1670.8298 0.82977013 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.39 3.7 5 1 12 2 2 2 1 1 1 1 1 1 1 1 1 1 1 1 77.705 76.56 2;3 3.9598E-06 93601 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 105.17 79.128 590110000 82140000 218460000 63996000 4417100 6759500 26100000 7233300 10984000 14738000 21072000 18403000 27349000 13869000 26442000 48147000 2712 3641 2483 23327;23328;23329;23330;23331;23332;23333;23334;23335;23336;23337;23338;23339;23340;23341;23342;23343;23344 18421;18422;18423;18424;18425;18426;18427;18428;18429;18430;18431;18432;18433;18434 18428 11 ALCEGEIIDK Unmodified 1146.5591 0.55907458 3268 Q8IY18 SMC5 Structural maintenance of chromosomes protein 5 yes yes 0 0 0 By MS/MS 2 0 1 1 50.069 44.362 2 0.027148 57737 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.378 32.132 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2713 3268 2484 23345 18435 18435 1 ALCGLDESK Unmodified 991.46445 0.46444592 1379 P36776 LONP1 Lon protease homolog, mitochondrial yes yes 0 0 0 By MS/MS 10 0 1 1 28.034 28.504 2 0.015842 30453 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 57.047 27.671 9000400 0 0 0 0 0 0 0 0 0 0 9000400 0 0 0 0 2714 1379 2485 23346 18436 18436 1 ALCNGDSK Acetyl (Protein N-term) 905.39128 0.39128097 1612 P49915 GMPS GMP synthase [glutamine-hydrolyzing] yes yes 1 0 0 By MS/MS By MS/MS 1.67 0.471 1 2 2 1 44.514 43.684 2 0.0064931 84057 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 78.324 68.685 30065000 23660000 6404800 0 0 0 0 0 0 0 0 0 0 0 0 0 2715 1612 2486 23347;23348;23349 18437;18438 18437 2 ALCNIVNNK Unmodified 1044.5386 0.53861391 445 O60921 HUS1 Checkpoint protein HUS1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.12 3.26 1 1 6 1 1 1 1 1 1 1 1 36.876 35.789 2 0.0006774 49271 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 128.38 95.025 40508000 10581000 2737900 0 0 0 0 0 0 0 3605500 3944900 4838900 4699000 4959200 5141300 2716 445 2487 23350;23351;23352;23353;23354;23355;23356;23357 18439;18440;18441;18442;18443;18444 18441 6 ALCSGSPAER Unmodified 1046.4815 0.48149296 1097 P19971 TYMP Thymidine phosphorylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 14.77 14.957 2 0.0023495 14454 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 84.498 65.011 33205000 0 0 0 16881000 0 3132000 0 0 0 0 0 4828500 0 0 8363300 2717 1097 2488 23358;23359;23360;23361 18445;18446 18446 1 ALCSGSPAERR Unmodified 1202.5826 0.58260399 1097 P19971 TYMP Thymidine phosphorylase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 11.036 11.184 3 0.0059372 9941 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 56.359 43.783 21571000 0 0 0 12323000 0 2056400 0 0 0 0 0 2546300 0 2080000 2565100 2718 1097 2489 23362;23363;23364;23365;23366 18447 18447 0 ALCTAHEK Unmodified 928.44365 0.44365089 3182 Q86WB0 ZC3HC1 Nuclear-interacting partner of ALK yes yes 0 0 0 By MS/MS 3 0 1 1 6.5271 3.1658 2 0.044485 4686 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 68.787 54.374 5895600 0 5895600 0 0 0 0 0 0 0 0 0 0 0 0 0 2719 3182 2490 23367 18448 18448 1 ALCYVISGQDQR Unmodified 1408.6769 0.67689831 2845 Q66K74 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 86.87 86.999 2 0.047353 100594 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.263 3.7894 23819000 0 0 0 0 0 2683500 0 2472100 0 3282500 2571600 3216600 1549200 2341900 5702100 2720 2845 2491 23368;23369;23370;23371;23372;23373;23374;23375 18449 18449 1 ALDAAFYK Unmodified 897.45962 0.45961853 916 P10155 TROVE2 60 kDa SS-A/Ro ribonucleoprotein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 51.489 51.622 2 0.039557 57125 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.632 19.328 110420000 0 0 0 11357000 5571100 6520300 10393000 0 6246000 9231800 11032000 11873000 0 11866000 26333000 2721 916 2492 23376;23377;23378;23379;23380;23381;23382;23383;23384;23385 18450;18451;18452;18453 18450 4 ALDADIYSAIPTEK Unmodified 1505.7613 0.76133944 3373 Q8N999 C12orf29 Uncharacterized protein C12orf29 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 78.1 77.282 2 4.8809E-14 91844 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 113.63 88.243 403710000 0 295290000 0 0 7895400 12617000 10157000 12043000 11082000 0 20790000 0 0 0 33836000 2722 3373 2493 23386;23387;23388;23389;23390;23391;23392;23393;23394 18454;18455;18456;18457;18458;18459;18460;18461;18462 18459 9 ALDADIYSAIPTEKVDGTCCYVTTYK Unmodified 2953.3725 0.37252595 3373 Q8N999 C12orf29 Uncharacterized protein C12orf29 yes yes 0 0 1 By MS/MS 3 0 1 1 84.696 81.462 3 0.00098107 97564 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 28.93 24.241 3911600 0 3911600 0 0 0 0 0 0 0 0 0 0 0 0 0 2723 3373 2494 23395 18463 18463 1 ALDAGLALGPSSPLLR Unmodified 1549.8828 0.88279198 3212 Q86YV9 HPS6 Hermansky-Pudlak syndrome 6 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 86.313 86.42 2 0.00035452 99875 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.563 54.637 68636000 0 0 0 0 4007200 6130500 4835200 5270500 4845700 7965100 7232200 7618600 5157700 5990800 9582700 2724 3212 2495 23396;23397;23398;23399;23400;23401;23402;23403;23404;23405;23406 18464;18465 18464 2 ALDCSEVTVR Unmodified 1148.5496 0.54957253 2991 Q6XQN6 NAPRT Nicotinate phosphoribosyltransferase yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 37.317 37.841 2 0.0023379 41411 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 84.615 53.541 40822000 0 0 0 0 0 0 0 0 0 0 0 23157000 0 17665000 0 2725 2991 2496 23407;23408 18466;18467 18467 1 ALDCSSSIR Unmodified 1007.4706 0.47059393 583 O94776 MTA2 Metastasis-associated protein MTA2 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 22.095 22.338 2 0.023437 23277 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 51.059 25.12 62105000 0 0 0 4038200 0 6472000 2559300 2688100 4114500 4724300 6325900 13902000 9588500 0 7692200 2726 583 2497 23409;23410;23411;23412;23413;23414;23415;23416;23417;23418 18468;18469 18469 2 ALDCSSSIRQPSLHMSAAAASR Unmodified 2315.111 0.11104715 583 O94776 MTA2 Metastasis-associated protein MTA2 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 53.593 54.036 4 0.0091556 60337 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 25.803 11.788 33344000 0 0 0 0 0 0 0 0 0 0 0 9986000 6843500 4636400 11878000 2727 583 2498 23419;23420;23421;23422 18470 18470 1 ALDCSSSVR Unmodified 993.45494 0.45494386 2272;4140 Q13330;Q9BTC8 MTA1;MTA3 Metastasis-associated protein MTA1;Metastasis-associated protein MTA3 no no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 14.897 15.176 2 0.030755 13930 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.036 12.886 57783000 0 0 0 0 0 5115600 0 0 3262900 5391900 7362300 9211300 12449000 8253000 6736500 2728 2272;4140 2499 23423;23424;23425;23426;23427;23428;23429;23430 18471;18472 18471 2 ALDDILNLK Unmodified 1013.5757 0.57571092 227 O14920 IKBKB Inhibitor of nuclear factor kappa-B kinase subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 84.985 80.333 2 0.0017213 100714 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 133.6 74.395 106720000 5522200 98778000 2415000 0 0 0 0 0 0 0 0 0 0 0 0 2729 227 2500 23431;23432;23433;23434 18473;18474;18475;18476 18473 4 ALDDISESIK Unmodified 1089.5554 0.55536941 5153 Q9Y3B8 REXO2 Oligoribonuclease, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 54.524 53.556 2 0.0013675 59592 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.15 90.697 280780000 0 124960000 0 21928000 7319800 12413000 0 9098500 0 11533000 31687000 25194000 0 0 36652000 2730 5153 2501 23435;23436;23437;23438;23439;23440;23441;23442;23443;23444;23445;23446 18477;18478;18479;18480;18481;18482;18483;18484;18485;18486;18487;18488;18489;18490 18483 14 ALDDMISTLK Oxidation (M) 1121.5638 0.56382561 1570 P49368 CCT3 T-complex protein 1 subunit gamma yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.38 3.62 6 4 19 4 5 1 1 2 2 1 2 2 2 2 2 1 2 54.827 53.188 2 0.0018279 61597 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 80.231 62.246 4127400000 76638000 2579700000 32065000 49187000 0 167330000 130410000 26967000 97190000 198280000 153900000 155940000 201280000 34536000 223990000 2731 1570 2502 23447;23448;23449;23450;23451;23452;23453;23454;23455;23456;23457;23458;23459;23460;23461;23462;23463;23464;23465;23466;23467;23468;23469;23470;23471;23472;23473;23474;23475 18491;18492;18493;18494;18495;18496;18497;18498;18499;18500;18501;18502;18503;18504;18505;18506;18507;18508;18509;18510;18511;18512 18510 2508 19 ALDDMISTLK Unmodified 1105.5689 0.56891099 1570 P49368 CCT3 T-complex protein 1 subunit gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.79 1 4 1 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 78.775 77.801 2 1.6796E-05 93478 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.07 92.271 11344000000 33449000 9030600000 63125000 69186000 93030000 244060000 118370000 165390000 111200000 203340000 252080000 234470000 141410000 173020000 411710000 2732 1570 2502 23476;23477;23478;23479;23480;23481;23482;23483;23484;23485;23486;23487;23488;23489;23490;23491;23492;23493 18513;18514;18515;18516;18517;18518;18519;18520;18521;18522;18523;18524;18525;18526;18527;18528;18529;18530 18516 18 ALDDMISTLKK Unmodified 1233.6639 0.663874 1570 P49368 CCT3 T-complex protein 1 subunit gamma yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 67.086 67.161 3 0.0028634 76935 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 47.894 35.835 82046000 0 0 0 5088800 2972900 2350000 4532300 4942600 0 6750800 8453000 19397000 7403800 6401200 13753000 2733 1570 2503 23494;23495;23496;23497;23498;23499;23500;23501;23502;23503;23504 18531;18532;18533;18534;18535;18536;18537 18532 7 ALDEELYK Unmodified 979.48623 0.48622722 588 O94808 GFPT2 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 yes yes 0 0 0 By MS/MS 2 0 1 1 48.509 42.862 2 0.01816 55844 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.142 62.18 42439000 0 42439000 0 0 0 0 0 0 0 0 0 0 0 0 0 2734 588 2504 23505 18538 18538 1 ALDEEVHK Unmodified 939.46616 0.46616048 2125 Q06210 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 5.57 3.85 3 1 3 1 2 1 1 1 1 14.616 12.795 2 0.012959 16005 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.523 78.887 473580000 23240000 411020000 19380000 0 0 0 848910 0 0 0 0 0 0 7258300 11835000 2735 2125 2505 23506;23507;23508;23509;23510;23511;23512 18539;18540;18541;18542;18543 18539 5 ALDEGDIALLK Unmodified 1156.634 0.63395408 1369 P35998 PSMC2 26S protease regulatory subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.564 75.605 2 1.3374E-07 87319 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 175.51 123.66 1290400000 0 0 0 78848000 92194000 133950000 0 42302000 0 195540000 202110000 303860000 44643000 71244000 125680000 2736 1369 2506 23513;23514;23515;23516;23517;23518;23519;23520;23521;23522;23523;23524 18544;18545;18546;18547;18548;18549;18550;18551;18552;18553;18554;18555;18556;18557 18545 14 ALDELFEAIEQK Unmodified 1404.7137 0.71366097 2646 Q27J81 INF2 Inverted formin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 89.983 90.094 2 0.0028161 104453 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 76.228 56.238 5233500 0 0 0 0 0 1405400 0 2940700 0 0 0 0 887350 0 0 2737 2646 2507 23525;23526;23527 18558 18558 1 ALDELMDGDIIVFQK Oxidation (M) 1721.8546 0.8545879 3702 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 85.488 84.82 2 6.6051E-38 104776 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 135.99 112.61 127020000 0 38897000 2232100 0 4522800 8147100 2778800 5795800 8215200 11077000 9427700 11152000 5430900 6086500 13256000 2738 3702 2508 23528;23529;23530;23531;23532;23533;23534;23535;23536;23537;23538;23539;23540;23541 18559;18560;18561;18562;18563;18564;18565;18566;18567;18568;18569;18570;18571;18572 18562 5271 14 ALDELMDGDIIVFQK Unmodified 1705.8597 0.85967328 3702 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 94.977 89.814 2 3.1339E-10 113184 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.66 93.719 42677000 23623000 17829000 1224700 0 0 0 0 0 0 0 0 0 0 0 0 2739 3702 2508 23542;23543;23544 18573;18574;18575 18574 2 ALDEMEK Unmodified 834.37932 0.3793193 3589 Q8WXF1 PSPC1 Paraspeckle component 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 19.222 18.851 2 0.02234 23164 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.43 69.784 127310000 0 75186000 0 2089000 2045500 3930400 2765500 3676800 2142900 6018600 5011600 4655500 4418700 4594300 10779000 2740 3589 2509 23545;23546;23547;23548;23549;23550;23551;23552;23553;23554;23555;23556;23557;23558 18576;18577 18576 2 ALDEPPYLTVGTDVSAK Unmodified 1774.8989 0.89889556 2688 Q4LE39 ARID4B AT-rich interactive domain-containing protein 4B yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 78.388 77.86 2 2.42E-18 94912 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.56 100.66 152200000 0 101990000 0 0 3524600 4085800 3003400 3449600 3562200 5832000 5515400 6258100 4033900 4141100 6800200 2741 2688 2510 23559;23560;23561;23562;23563;23564;23565;23566;23567;23568;23569;23570;23571 18578;18579;18580;18581;18582;18583;18584;18585 18579 8 ALDESHNQNLK Unmodified 1267.6157 0.61567826 586 O94804 STK10 Serine/threonine-protein kinase 10 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 15.807 12.341 2 4.0744E-09 16323 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 156.83 119.64 13317000 0 13317000 0 0 0 0 0 0 0 0 0 0 0 0 0 2742 586 2511 23572;23573 18586 18586 1 ALDEVTSSQPPPLPPPPPPAQETQEPSPILDSEETR Unmodified 3845.8847 0.88470864 2621 Q16643 DBN1 Drebrin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 84.175 84.278 4 3.0752E-61 97779 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 78.22 74.621 100370000 0 0 0 0 14278000 0 8342800 0 9963000 15720000 10705000 15333000 5070900 10113000 10841000 2743 2621 2512 23574;23575;23576;23577;23578;23579;23580;23581;23582 18587;18588;18589;18590;18591;18592;18593;18594;18595;18596;18597;18598 18597 12 ALDEYYDK Unmodified 1015.4498 0.44984171 1398 P38606 ATP6V1A V-type proton ATPase catalytic subunit A yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 35.489 34.565 2 0.011977 38618 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 75.692 58.399 236010000 2584200 84012000 0 0 5687600 18837000 9722900 9122800 9207400 23020000 0 0 20185000 19451000 34180000 2744 1398 2513 23583;23584;23585;23586;23587;23588;23589;23590;23591;23592;23593 18599;18600;18601;18602 18599 4 ALDFIASK Unmodified 863.47527 0.4752686 356;971 O43707;P12814 ACTN4;ACTN1 Alpha-actinin-4;Alpha-actinin-1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.56 3.57 5 3 17 2 5 1 3 1 1 2 1 2 2 1 1 1 1 1 59.956 58.544 2 0.0068474 63234 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 94.114 44.756 6599100000 306180000 4828900000 260220000 40667000 29049000 82358000 44917000 48271000 30843000 73269000 155010000 145900000 57680000 131030000 364800000 2745 356;971 2514 23594;23595;23596;23597;23598;23599;23600;23601;23602;23603;23604;23605;23606;23607;23608;23609;23610;23611;23612;23613;23614;23615;23616;23617;23618 18603;18604;18605;18606;18607;18608;18609;18610;18611;18612;18613;18614;18615;18616;18617;18618;18619;18620;18621;18622;18623 18622 20 ALDGAFTEENR Unmodified 1221.5626 0.56258006 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.268 42.445 2 0.00050177 47536 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 98.048 61.653 214620000 0 0 0 10386000 8288400 28438000 11560000 10574000 10906000 27172000 18791000 22191000 22219000 15350000 28748000 2746 5187 2515 23619;23620;23621;23622;23623;23624;23625;23626;23627;23628;23629;23630 18624;18625;18626;18627;18628;18629;18630;18631;18632;18633;18634 18626 8 ALDGAFTEENRAQCR Unmodified 1736.79 0.79003058 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 39.414 39.494 3 0.00029532 44447 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 49.482 39.285 75977000 0 0 0 12833000 13340000 0 0 0 0 0 0 0 15766000 12030000 22008000 2747 5187 2516 23631;23632;23633;23634;23635;23636 18635;18636;18637;18638 18638 4 ALDGDFSEDNRNK Unmodified 1479.659 0.65899964 5201 Q9Y4G6 TLN2 Talin-2 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 31.243 26.797 3 0.011315 35208 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 49.732 20.968 34668000 0 34668000 0 0 0 0 0 0 0 0 0 0 0 0 0 2748 5201 2517 23637;23638 18639;18640;18641 18640 3 ALDGEESDFEDYPMR Oxidation (M) 1788.7149 0.71485954 3256 Q8IX90 SKA3 Spindle and kinetochore-associated protein 3 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 59.131 59.037 2 0.001669 67683 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 47.288 43.756 17259000 0 0 0 2406500 2086300 0 2854200 2567200 0 3250600 0 0 4094200 0 0 2749 3256 2518 23639;23640;23641;23642;23643;23644 18642;18643 18643 4873 2 ALDGEESDFEDYPMR Unmodified 1772.7199 0.71994491 3256 Q8IX90 SKA3 Spindle and kinetochore-associated protein 3 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 69.047 69.324 2 9.6811E-15 79591 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 103.35 101.94 21468000 0 0 0 0 0 0 0 2578500 0 3378100 3691400 4562900 0 3000500 4256900 2750 3256 2518 23645;23646;23647;23648;23649;23650;23651 18644;18645;18646;18647;18648 18648 5 ALDGINSGITHAGR Unmodified 1380.711 0.71097563 2981 Q6UWP8 SBSN Suprabasin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 43.057 43.061 3 7.2609E-13 48841 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 107.14 86.677 115520000 0 0 0 37438000 7388800 7151300 8891000 16293000 0 0 9963700 0 28393000 0 0 2751 2981 2519 23652;23653;23654;23655;23656;23657;23658 18649;18650;18651;18652;18653 18652 3 ALDGINSGITHAGREVEK Unmodified 1865.9595 0.95953875 2981 Q6UWP8 SBSN Suprabasin yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 2 1 2 2 1 46.769 46.957 3;4 1.0272E-05 52151 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 72.433 58.529 127570000 0 0 0 20616000 2994900 4765400 0 14337000 2909400 9642300 10898000 24024000 32218000 5162000 0 2752 2981 2520 23659;23660;23661;23662;23663;23664;23665;23666;23667;23668;23669;23670;23671 18654;18655;18656;18657;18658;18659;18660 18659 7 ALDGPEQMELEEGK Acetyl (Protein N-term);Oxidation (M) 1602.7083 0.70831759 1876 P62195 PSMC5 26S protease regulatory subunit 8 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.44 2.18 1 15 1 2 2 1 1 2 2 2 1 1 1 66.957 67.301 2 8.9736E-30 87718 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 137.89 129.38 302210000 12613000 0 0 21159000 25377000 17129000 6721000 0 0 55296000 61220000 87383000 8859700 6455000 0 2753 1876 2521 23672;23673;23674;23675;23676;23677;23678;23679;23680;23681;23682;23683;23684;23685;23686;23687 18661;18662;18663;18664;18665;18666;18667;18668;18669;18670;18671;18672 18665 3039 12 ALDGPEQMELEEGK Acetyl (Protein N-term) 1586.7134 0.71340297 1876 P62195 PSMC5 26S protease regulatory subunit 8 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.79 2.98 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 77.6 77.446 2 3.3095E-48 89123 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 206.97 196.01 448370000 60072000 0 0 21563000 31508000 41916000 8422200 14077000 11890000 49929000 68180000 80796000 7900400 13259000 38863000 2754 1876 2521 23688;23689;23690;23691;23692;23693;23694;23695;23696;23697;23698;23699;23700;23701 18673;18674;18675;18676;18677;18678;18679;18680;18681;18682;18683;18684;18685 18678 13 ALDGQMSSLSGDAEK Unmodified 1507.6824 0.6824372 5362 yes yes 0 0 0 By MS/MS 2 0 1 1 49.467 45.552 2 0.037685 57243 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 49.5 13.989 + 3029000 0 0 3029000 0 0 0 0 0 0 0 0 0 0 0 0 2755 5362 2522 23702 18686 18686 1 ALDIAENEMPGLMR 2 Oxidation (M) 1590.7382 0.73817794 1164 P23526 AHCY Adenosylhomocysteinase yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 59.219 59.32 2 0.0001367 67285 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 70.942 57.279 103200000 0 0 0 7531000 3871800 0 6134700 0 3653400 6610900 19929000 16828000 0 10516000 28123000 2756 1164 2523 23703;23704;23705;23706;23707;23708;23709;23710;23711 18687;18688;18689;18690;18691;18692;18693;18694;18695 18690 1679;1680 9 ALDIAENEMPGLMR Oxidation (M) 1574.7433 0.74326331 1164 P23526 AHCY Adenosylhomocysteinase yes yes 0 1 0 By MS/MS By MS/MS 10 0 4 2 2 69.426 69.8 2 0.00095523 86586 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.819 63.243 18683000 0 0 0 0 0 0 0 0 0 0 4942700 0 0 0 13741000 2757 1164 2523 23712;23713;23714;23715 18696;18697;18698 18697 1679;1680 3 ALDIAENEMPGLMR Unmodified 1558.7483 0.74834869 1164 P23526 AHCY Adenosylhomocysteinase yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 81.368 81.523 2 1.2168E-26 93910 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 188.28 172.02 93821000 0 0 0 0 0 0 0 0 0 4458900 12162000 7271800 0 7882500 62046000 2758 1164 2523 23716;23717;23718;23719;23720 18699;18700;18701;18702 18699 4 ALDIDLDK Unmodified 901.47566 0.47566253 193 O14617 AP3D1 AP-3 complex subunit delta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 56.503 56.57 2 0.031786 63154 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 54.712 11.494 113450000 0 0 0 11308000 8007100 0 12090000 6057600 0 0 19652000 0 20764000 16694000 18880000 2759 193 2524 23721;23722;23723;23724;23725;23726;23727;23728 18703;18704 18704 1 ALDIDLDKPLADSEK Unmodified 1641.8461 0.8461317 193 O14617 AP3D1 AP-3 complex subunit delta-1 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 72.686 72.751 3 0.00094051 83604 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 51.727 38.85 82390000 0 0 0 1374300 8129000 0 5736900 0 6463000 7941300 9097500 11790000 9475400 8444000 13939000 2760 193 2525 23729;23730;23731;23732;23733;23734;23735;23736;23737;23738 18705;18706;18707;18708;18709;18710;18711 18710 7 ALDLDPENDSYK Unmodified 1378.6252 0.62523989 3819 Q96EQ0 SGTB Small glutamine-rich tetratricopeptide repeat-containing protein beta yes yes 0 0 0 By MS/MS 2 0 1 1 61.331 55.456 2 0.00063776 71267 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.78 97.614 53431000 0 53431000 0 0 0 0 0 0 0 0 0 0 0 0 0 2761 3819 2526 23739 18712 18712 0 ALDLDSSCK Unmodified 1007.4594 0.45936054 1313 P31948 STIP1 Stress-induced-phosphoprotein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.67 3.97 1 3 1 7 2 2 1 1 1 1 1 1 1 1 30.842 29.124 2 8.3709E-06 36934 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 155.75 93.037 1452800000 63231000 1311000000 4257400 0 0 3523400 5217400 0 4442700 0 22996000 0 14140000 23942000 0 2762 1313 2527 23740;23741;23742;23743;23744;23745;23746;23747;23748;23749;23750;23751 18713;18714;18715;18716;18717;18718;18719;18720;18721;18722;18723;18724;18725;18726 18718 13 ALDLFSDNAPPPELLEIINEDIAK Unmodified 2636.3585 0.35851409 2496 Q15084 PDIA6 Protein disulfide-isomerase A6 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 102.14 96.696 3 1.3412E-07 121179 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.649 67.107 32371000 18519000 13852000 0 0 0 0 0 0 0 0 0 0 0 0 0 2763 2496 2528 23752;23753;23754 18727;18728;18729 18729 3 ALDLLDK Unmodified 786.44872 0.4487195 1236 P28482 MAPK1 Mitogen-activated protein kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56.169 55.08 2 0.023435 62634 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 85.265 24.907 850580000 20290000 458480000 17593000 20401000 16159000 29972000 24542000 19885000 19249000 36711000 38120000 31912000 26861000 31584000 58827000 2764 1236 2529 23755;23756;23757;23758;23759;23760;23761;23762;23763;23764;23765;23766;23767;23768;23769 18730;18731;18732;18733;18734;18735;18736;18737;18738;18739;18740;18741 18730 12 ALDLLDR Unmodified 814.45487 0.45486751 1215 P27361 MAPK3 Mitogen-activated protein kinase 3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 58.956 59.062 2 0.024591 67049 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 97.602 0 135560000 0 0 0 8654700 8342500 16738000 14402000 0 6778500 12599000 14651000 11845000 10488000 8409700 22653000 2765 1215 2530 23770;23771;23772;23773;23774;23775;23776;23777;23778;23779;23780 18742;18743;18744 18744 2 ALDLLEYIDEEEDININDLK Unmodified 2376.1584 0.1584173 3548 Q8WUM0 NUP133 Nuclear pore complex protein Nup133 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 98.424 91.95 2;3 6.8992E-16 118226 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.64 93.94 34097000 15346000 18751000 0 0 0 0 0 0 0 0 0 0 0 0 0 2766 3548 2531 23781;23782;23783 18745;18746 18746 1 ALDLLYGMVSK Unmodified 1208.6475 0.64749566 193 O14617 AP3D1 AP-3 complex subunit delta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 85.723 85.813 2 0.0017082 99092 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.533 68.293 24771000 0 0 0 0 1005000 2361400 0 2489800 1732800 2783300 0 4163000 0 2196000 8039900 2767 193 2532 23784;23785;23786;23787;23788;23789;23790;23791;23792 18747;18748;18749;18750;18751;18752;18753;18754 18749 8 ALDLLYGMVSK Oxidation (M) 1224.6424 0.64241028 193 O14617 AP3D1 AP-3 complex subunit delta-1 yes yes 0 1 0 By MS/MS By matching By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 74.977 75.074 2 0.0078321 87013 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 48.091 25.351 18484000 0 0 0 0 0 4082000 0 0 3322800 3720500 0 0 3697300 3661500 0 2768 193 2532 23793;23794;23795;23796;23797 18755;18756;18757 18757 262 1 ALDLVAAK Unmodified 799.48035 0.48035398 308 O43242 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 45.32 45.475 2 0.0096192 50489 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 82.305 19.591 366100000 0 0 0 24040000 37097000 38973000 13017000 12814000 0 60218000 64351000 68526000 0 20209000 26858000 2769 308 2533 23798;23799;23800;23801;23802;23803;23804;23805;23806;23807 18758;18759;18760;18761;18762;18763;18764;18765 18762 7 ALDLVSDPEYINLMK Oxidation (M) 1735.8702 0.87023797 4452 Q9H8M7 FAM188A Protein FAM188A yes yes 0 1 0 By MS/MS 2 0 1 1 86.864 82.056 2 0.00080113 102007 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.153 52.818 38683000 0 38683000 0 0 0 0 0 0 0 0 0 0 0 0 0 2770 4452 2534 23808 18766;18767 18767 5892 2 ALDLVSDPEYINLMK Unmodified 1719.8753 0.87532334 4452 Q9H8M7 FAM188A Protein FAM188A yes yes 0 0 0 By MS/MS 2 0 1 1 93.739 88.843 2 2.723E-06 110215 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.42 89.73 52227000 0 52227000 0 0 0 0 0 0 0 0 0 0 0 0 0 2771 4452 2534 23809 18768 18768 1 ALDMLDAEK Oxidation (M) 1020.4798 0.47976163 4491 Q9HAV4 XPO5 Exportin-5 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.1 3.41 5 16 2 2 1 2 2 1 1 1 2 2 2 1 1 1 34.054 32.978 2 0.0034777 36782 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 78.149 56.018 291450000 10206000 194710000 1638300 7613800 0 14959000 4793800 2792500 3325100 11764000 11259000 15005000 4630900 5354500 3402100 2772 4491 2535 23810;23811;23812;23813;23814;23815;23816;23817;23818;23819;23820;23821;23822;23823;23824;23825;23826;23827;23828;23829;23830 18769;18770;18771;18772;18773;18774;18775;18776;18777;18778;18779;18780;18781;18782;18783 18771 5921 15 ALDMLDAEK Unmodified 1004.4848 0.48484701 4491 Q9HAV4 XPO5 Exportin-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 53.743 52.377 2 0.00917 58297 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.507 45.121 417250000 20371000 308110000 0 0 0 15543000 7956700 0 4258600 15164000 12290000 0 0 11839000 21718000 2773 4491 2535 23831;23832;23833;23834;23835;23836;23837;23838;23839 18784;18785;18786;18787;18788;18789;18790 18787 7 ALDMSYDHKPEDEVELAR Unmodified 2116.9735 0.97353384 275 O15355 PPM1G Protein phosphatase 1G yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 2 1 2 2 2 2 2 2 59.662 59.949 3;4 0.00095365 67665 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 39.385 35.781 176080000 0 0 0 0 0 6745000 0 10220000 4449800 12182000 15762000 26569000 17723000 22452000 59976000 2774 275 2536 23840;23841;23842;23843;23844;23845;23846;23847;23848;23849;23850;23851;23852;23853;23854;23855 18791;18792 18791 1 ALDMSYDHKPEDEVELARIK Unmodified 2358.1526 0.15256084 275 O15355 PPM1G Protein phosphatase 1G yes yes 0 0 2 By MS/MS 1.75 0.433 1 3 4 83.547 78.766 3;4;5 8.405E-13 88193 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.384 86.096 141440000 141440000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2775 275 2537 23856;23857;23858;23859 18793;18794;18795;18796 18794 2 ALDNSLQPK Unmodified 984.52401 0.52400971 3114 Q7Z6J9 TSEN54 tRNA-splicing endonuclease subunit Sen54 yes yes 0 0 0 By MS/MS 2 0 1 1 33.784 29.14 2 0.0088229 38145 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.046 30.264 81052000 0 81052000 0 0 0 0 0 0 0 0 0 0 0 0 0 2776 3114 2538 23860 18797 18797 1 ALDPAAAAYLFQR Unmodified 1405.7354 0.73539946 488 O75376 NCOR1 Nuclear receptor corepressor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 85.9 85.972 2 0.00039596 99446 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 83 65.974 39076000 0 0 0 0 3930800 6067900 4539200 0 5843000 0 0 8065700 4506200 6122800 0 2777 488 2539 23861;23862;23863;23864;23865;23866;23867 18798;18799;18800;18801;18802;18803;18804;18805 18799 8 ALDPEISSGEGLR Unmodified 1342.6729 0.67285879 2160 Q08554 DSC1 Desmocollin-1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 56.888 56.649 2 0.012128 65154 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 42.243 31.021 29092000 0 0 0 24259000 0 0 0 0 0 0 0 0 0 4832600 0 2778 2160 2540 23868;23869 18806;18807 18807 2 ALDQADSGCR Unmodified 1091.4666 0.46657118 4570 Q9NQG6 MIEF1 Mitochondrial dynamics protein MID51 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 10.395 10.614 2 0.017731 8259 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 48.794 35.019 2621900 0 0 0 0 0 0 0 0 0 0 0 0 1285100 1336800 0 2779 4570 2541 23870;23871 18808 18808 1 ALDQFVNFSEQK Unmodified 1424.6936 0.69359423 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 75.216 75.193 2 2.3745E-43 86765 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 182.16 167.22 202450000 0 0 0 16572000 17963000 26464000 24635000 25358000 22840000 41886000 0 0 26737000 0 0 2780 5071 2542 23872;23873;23874;23875;23876;23877;23878;23879 18809;18810;18811;18812;18813;18814;18815;18816;18817;18818;18819 18811 11 ALDTMNFDVIK Oxidation (M) 1281.6275 0.6274885 958;2268 Q13310;P11940 PABPC4;PABPC1 Polyadenylate-binding protein 4;Polyadenylate-binding protein 1 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.689 70.76 2 1.9846E-05 81310 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 118.18 85.337 1599400000 0 0 0 82321000 91609000 133890000 108270000 109450000 85298000 181240000 171930000 207830000 127850000 123490000 176220000 2781 2268;958 2543 23880;23881;23882;23883;23884;23885;23886;23887;23888;23889;23890;23891 18820;18821;18822;18823;18824;18825;18826;18827;18828;18829;18830;18831 18820 1240 12 ALDTMNFDVIK Unmodified 1265.6326 0.63257388 958;2268 Q13310;P11940 PABPC4;PABPC1 Polyadenylate-binding protein 4;Polyadenylate-binding protein 1 no no 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 80.521 80.21 2 1.7418E-05 99633 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.18 86.243 751210000 0 42727000 0 21208000 31228000 53897000 33723000 44934000 41491000 73099000 64479000 86165000 42698000 63905000 151660000 2782 2268;958 2543 23892;23893;23894;23895;23896;23897;23898;23899;23900;23901;23902;23903;23904 18832;18833;18834 18833 3 ALDTTDMER Unmodified 1050.4652 0.4651742 3038 Q7KZ85 SUPT6H Transcription elongation factor SPT6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 28.493 28.705 2 0.009002 29966 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.993 45.907 18427000 0 0 0 0 2222000 0 0 0 0 0 0 0 6243900 0 9961300 2783 3038 2544 23905;23906;23907;23908;23909;23910 18835;18836;18837;18838;18839 18836 5 ALDTTDMER Oxidation (M) 1066.4601 0.46008882 3038 Q7KZ85 SUPT6H Transcription elongation factor SPT6 yes yes 0 1 0 By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 12.833 13.116 2 0.036002 11447 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.029 24.826 9053600 0 0 0 0 0 794130 0 0 0 0 1100800 2721000 1583300 1295400 1559000 2784 3038 2544 23911;23912;23913;23914;23915;23916 18840;18841 18840 2 ALDVMVSTFHK Oxidation (M) 1262.6329 0.63290823 1206 P26447 S100A4 Protein S100-A4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.88 3.87 17 2 29 11 2 6 1 3 4 2 2 3 2 3 3 2 2 2 56.414 54.754 2;3 3.1767E-09 73749 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 136.57 108.68 6369000000 2426800000 821270000 1196100000 14340000 90930000 150670000 33490000 98010000 160100000 187180000 245650000 320800000 126200000 161010000 336440000 2785 1206 2545 23917;23918;23919;23920;23921;23922;23923;23924;23925;23926;23927;23928;23929;23930;23931;23932;23933;23934;23935;23936;23937;23938;23939;23940;23941;23942;23943;23944;23945;23946;23947;23948;23949;23950;23951;23952;23953;23954;23955;23956;23957;23958;23959;23960;23961;23962;23963;23964 18842;18843;18844;18845;18846;18847;18848;18849;18850;18851;18852;18853;18854;18855;18856;18857;18858;18859;18860;18861;18862;18863;18864;18865;18866;18867;18868;18869;18870;18871;18872;18873;18874;18875;18876;18877;18878;18879;18880;18881;18882;18883;18884;18885;18886;18887;18888;18889;18890;18891;18892;18893;18894;18895 18863 1760 51 ALDVMVSTFHK Unmodified 1246.638 0.63799361 1206 P26447 S100A4 Protein S100-A4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.29 3.77 1 9 2 23 7 2 3 1 2 2 2 2 2 2 2 2 2 2 2 68.166 66.726 2;3 3.7276E-09 81893 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 150.85 122.46 8293100000 4632900000 521510000 560010000 38611000 57532000 140950000 106070000 89783000 122340000 127790000 238300000 309850000 119870000 280240000 947350000 2786 1206 2545 23965;23966;23967;23968;23969;23970;23971;23972;23973;23974;23975;23976;23977;23978;23979;23980;23981;23982;23983;23984;23985;23986;23987;23988;23989;23990;23991;23992;23993;23994;23995;23996;23997;23998;23999 18896;18897;18898;18899;18900;18901;18902;18903;18904;18905;18906;18907;18908;18909;18910;18911;18912;18913;18914;18915;18916;18917;18918;18919;18920;18921;18922;18923;18924;18925;18926;18927;18928;18929;18930;18931;18932;18933;18934;18935;18936;18937;18938;18939 18929 31 ALDVSASDDEIAR Unmodified 1360.647 0.64703797 987 P13798 APEH Acylamino-acid-releasing enzyme yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 49.973 50.058 2 1.3817E-11 55460 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 140.3 61.966 90245000 0 0 0 7029700 4319300 0 0 0 0 0 17827000 0 10393000 18717000 31959000 2787 987 2546 24000;24001;24002;24003;24004;24005;24006;24007 18940;18941;18942;18943;18944;18945;18946;18947 18941 8 ALDVSASDDEIARLK Unmodified 1601.8261 0.82606496 987 P13798 APEH Acylamino-acid-releasing enzyme yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.33 0.471 6 3 2 6 1 71.549 65.884 2;3 1.2708E-06 83836 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.36 82.282 502690000 61941000 416150000 24599000 0 0 0 0 0 0 0 0 0 0 0 0 2788 987 2547 24008;24009;24010;24011;24012;24013;24014;24015;24016 18948;18949;18950;18951;18952;18953;18954;18955;18956 18948 7 ALDVTDKEGEEREDADVSVTQR Unmodified 2461.1569 0.15685417 4669 Q9NVI1 FANCI Fanconi anemia group I protein yes yes 0 0 2 By MS/MS 10 0 1 1 43.761 44.515 3 0.046839 49396 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 36.899 24.942 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2789 4669 2548 24017 18957 18957 1 ALDYCHSK Unmodified 992.43857 0.43856552 1094 P19784 CSNK2A2 Casein kinase II subunit alpha' yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 14.377 11.554 2 0.015843 15363 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.195 53.092 28749000 0 22509000 6240600 0 0 0 0 0 0 0 0 0 0 0 0 2790 1094 2549 24018;24019 18958 18958 1 ALDYYMLR Oxidation (M) 1059.5059 0.5059168 5187 Q9Y490 TLN1 Talin-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.359 59.469 2 0.019409 67694 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 56.122 46.534 148390000 0 0 0 7336200 6923800 18989000 12292000 7708700 8406600 20814000 12210000 19281000 10396000 10151000 13882000 2791 5187 2550 24020;24021;24022;24023;24024;24025;24026;24027;24028;24029;24030;24031 18959;18960;18961;18962 18960 6558 4 ALEAAALAH Unmodified 865.46577 0.46576654 1560 P49137 MAPKAPK2 MAP kinase-activated protein kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching 10 0 7 1 1 1 1 1 1 1 40.198 40.468 2 0.016434 44799 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 56.541 38.693 33256000 0 0 0 0 0 4837100 3028200 0 2195700 5455700 8035500 4058100 0 5646100 0 2792 1560 2551 24032;24033;24034;24035;24036;24037;24038 18963;18964;18965 18965 3 ALEAAHGPGQANQEIAAMIDTEFAK Unmodified 2582.2435 0.24350111 2572 Q15750 TAB1 TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 91.975 88.298 3 6.0087E-22 110080 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.468 76.307 13299000 0 12577000 722280 0 0 0 0 0 0 0 0 0 0 0 0 2793 2572 2552 24039;24040 18966;18967 18966 2 ALEAALVEK Unmodified 942.5386 0.53859714 1575 P49454 CENPF Centromere protein F yes yes 0 0 0 By MS/MS 2 0 1 1 52.301 46.527 2 0.023702 60424 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.162 21.82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2794 1575 2553 24041 18968 18968 1 ALEAAQQEK Unmodified 986.50327 0.50327426 4255 Q9BYX2 TBC1D2 TBC1 domain family member 2A yes yes 0 0 0 By MS/MS 2 0 1 1 11.625 8.3463 2 0.0057635 11531 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.29 58.734 8540800 0 8540800 0 0 0 0 0 0 0 0 0 0 0 0 0 2795 4255 2554 24042 18969 18969 1 ALEAEREAIISEK Unmodified 1457.7726 0.77257283 4814 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 25 2 3 2 2 2 2 2 2 2 2 2 2 45.459 45.601 2;3 3.9451E-08 51200 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 98.156 44.829 366940000 0 0 0 21921000 29216000 19753000 27908000 30254000 22801000 38669000 40986000 42022000 24668000 25275000 43470000 2796 4814 2555 24043;24044;24045;24046;24047;24048;24049;24050;24051;24052;24053;24054;24055;24056;24057;24058;24059;24060;24061;24062;24063;24064;24065;24066;24067 18970;18971;18972;18973;18974;18975;18976;18977;18978;18979;18980;18981;18982;18983;18984 18972 13 ALEAFETFK Unmodified 1054.5335 0.53351176 2045 Q00796 SORD Sorbitol dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.67 2.87 3 2 1 2 2 1 1 74.61 70.76 2 0.0041866 89174 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.5 87.36 533090000 36742000 449130000 30563000 0 0 0 0 0 0 0 0 0 0 0 16652000 2797 2045 2556 24068;24069;24070;24071;24072;24073 18985;18986;18987;18988;18989 18985 5 ALEAFETFKK Unmodified 1182.6285 0.62847478 2045 Q00796 SORD Sorbitol dehydrogenase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 3 2 1 65.567 59.54 2;3 3.2634E-05 80012 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 136.57 101.27 447270000 331990000 56539000 58742000 0 0 0 0 0 0 0 0 0 0 0 0 2798 2045 2557 24074;24075;24076;24077;24078;24079 18990;18991;18992;18993;18994 18993 3 ALEALEPMYDPDTLAQDANAAQQELK Oxidation (M) 2860.3437 0.34366866 5245 Q9Y5Q9 GTF3C3 General transcription factor 3C polypeptide 3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 6.25 3.77 1 1 2 2 1 1 88.758 86.81 3 5.12E-47 106720 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.45 103.52 109480000 0 96259000 0 0 0 0 0 0 0 10007000 3212200 0 0 0 0 2799 5245 2558 24080;24081;24082;24083 18995;18996;18997;18998;18999 18996 6647 5 ALEALEPMYDPDTLAQDANAAQQELK Unmodified 2844.3488 0.34875404 5245 Q9Y5Q9 GTF3C3 General transcription factor 3C polypeptide 3 yes yes 0 0 0 By MS/MS 2 0 1 1 94.69 89.825 3 7.0467E-13 111353 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.445 73.635 55672000 0 55672000 0 0 0 0 0 0 0 0 0 0 0 0 0 2800 5245 2558 24084 19000;19001 19000 2 ALEALVAK Unmodified 813.496 0.49600404 999 P14550 AKR1A1 Alcohol dehydrogenase [NADP(+)] yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.39 3.7 5 1 12 1 3 2 1 1 1 1 1 1 1 1 1 1 1 1 47.013 45.334 1;2 0.0087129 49245 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.265 46.047 959090000 37669000 741050000 50896000 6032600 4456700 5480200 5681200 6800000 4312900 6405200 14963000 11310000 6376100 10286000 47377000 2801 999 2559 24085;24086;24087;24088;24089;24090;24091;24092;24093;24094;24095;24096;24097;24098;24099;24100;24101;24102 19002;19003;19004;19005;19006;19007;19008;19009;19010 19004 7 ALEAQNEIHTK Unmodified 1252.6412 0.64116473 4580 Q9NQX4 MYO5C Unconventional myosin-Vc yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 22.857 23.036 2 0.035166 24368 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 49.06 36.472 20437000 0 0 0 2075400 1409000 1453900 1536800 1172700 802620 3089900 2267500 3717000 0 0 2911900 2802 4580 2560 24103;24104;24105;24106;24107;24108;24109;24110;24111;24112 19011 19011 1 ALEATTEHIR Unmodified 1139.5935 0.59348625 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 20 2 1 2 2 1 2 2 2 1 2 2 1 25.869 26.053 2;3 0.0060229 27805 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 76.827 29.76 161700000 0 0 0 13381000 1344600 22112000 11260000 11908000 6844600 18659000 18207000 23128000 16713000 10824000 7320200 2803 5187 2561 24113;24114;24115;24116;24117;24118;24119;24120;24121;24122;24123;24124;24125;24126;24127;24128;24129;24130;24131;24132 19012;19013;19014;19015 19012 4 ALEAVFGK Unmodified 833.4647 0.46470391 1395 P38159 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.12 3 13 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 54.472 53.423 2 0.0097801 60169 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 81.784 24.32 851550000 50273000 409720000 34531000 24890000 27150000 27332000 30619000 26822000 26609000 29136000 23905000 42507000 27944000 22817000 47295000 2804 1395 2562 24133;24134;24135;24136;24137;24138;24139;24140;24141;24142;24143;24144;24145;24146;24147;24148 19016;19017;19018;19019;19020;19021;19022;19023;19024;19025;19026;19027;19028;19029 19021 14 ALECFCQAASEVGK Unmodified 1568.6963 0.69631312 2184 Q12769 NUP160 Nuclear pore complex protein Nup160 yes yes 0 0 0 By MS/MS 2 0 1 1 69.735 63.866 2 0.00097008 81270 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.979 52.252 26793000 0 26793000 0 0 0 0 0 0 0 0 0 0 0 0 0 2805 2184 2563 24149 19030 19030 1 ALEDAFLAIDAK Unmodified 1275.6711 0.67106787 275 O15355 PPM1G Protein phosphatase 1G yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.18 3.37 1 3 1 17 2 2 1 2 1 1 1 1 1 1 1 2 2 2 2 83.874 83.03 2 2.385E-05 96457 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 91.855 68.426 789400000 64196000 428750000 26527000 6243200 7938200 14102000 8609600 9004900 13596000 24391000 26101000 34624000 26780000 34985000 63550000 2806 275 2564 24150;24151;24152;24153;24154;24155;24156;24157;24158;24159;24160;24161;24162;24163;24164;24165;24166;24167;24168;24169;24170;24171 19031;19032;19033;19034;19035;19036;19037;19038;19039;19040;19041;19042;19043;19044;19045;19046;19047 19040 16 ALEDARINLLK Unmodified 1254.7296 0.7295858 4079 Q9BPX3 NCAPG Condensin complex subunit 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 72.78 67.03 3 0.011674 87857 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.359 22.493 110330000 79063000 19124000 12142000 0 0 0 0 0 0 0 0 0 0 0 0 2807 4079 2565 24172;24173;24174 19048;19049 19049 2 ALEDDEELAHLGLGVDVAK Unmodified 1993.0004 0.0004005156 202 O14686 KMT2D Histone-lysine N-methyltransferase 2D yes yes 0 0 0 By MS/MS 2 0 1 1 87.557 82.748 3 0.0031548 102872 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 38.915 34.298 30939000 0 30939000 0 0 0 0 0 0 0 0 0 0 0 0 0 2808 202 2566 24175 19050 19050 1 ALEDDIINHNK Unmodified 1280.6361 0.63607935 2086 Q03001 DST Dystonin yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 48.161 42.899 3 0.021708 55725 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 33.088 27.625 17564000 0 17564000 0 0 0 0 0 0 0 0 0 0 0 0 0 2809 2086 2567 24176;24177 19051 19051 1 ALEDFADNIK Unmodified 1134.5557 0.55570376 5058 Q9UPT5 EXOC7 Exocyst complex component 7 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 65.744 64.347 2 0.0016376 73885 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 89.698 49.43 291440000 4974400 160510000 2155700 1023400 0 12664000 9717800 11036000 9426900 11562000 14605000 15710000 10896000 7606200 19550000 2810 5058 2568 24178;24179;24180;24181;24182;24183;24184;24185;24186;24187;24188;24189;24190;24191;24192 19052;19053;19054;19055;19056;19057;19058;19059;19060;19061;19062;19063 19063 12 ALEDFEATDLK Unmodified 1250.603 0.60304789 2818 Q5VUA4 ZNF318 Zinc finger protein 318 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 65.674 65.258 2 0.00081252 75162 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 80.688 45.393 118880000 0 70397000 0 3624900 3501600 6012800 4308700 0 2760000 3935800 4912100 5374000 3264800 4860900 5923800 2811 2818 2569 24193;24194;24195;24196;24197;24198;24199;24200;24201;24202;24203;24204 19064;19065;19066;19067;19068;19069;19070;19071;19072;19073;19074;19075;19076;19077 19074 14 ALEDLAGFK Unmodified 962.5073 0.50729701 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 70.909 66.205 2 0.0074475 84275 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.253 48.51 114450000 0 111920000 2535700 0 0 0 0 0 0 0 0 0 0 0 0 2812 1492 2570 24205;24206 19078;19079 19079 2 ALEDLHK Unmodified 824.43922 0.43921744 1054 P17535 JUND Transcription factor jun-D yes yes 0 0 0 By MS/MS 10 0 1 1 16.831 16.988 2 0.050025 16494 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 63.148 8.3611 8472200 0 0 0 0 0 0 0 0 8472200 0 0 0 0 0 0 2813 1054 2571 24207 19080 19080 1 ALEDLVDFK Unmodified 1048.5441 0.54407645 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 0 By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 78.958 79.109 2 0.011616 91512 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 62.546 39.023 26971000 0 0 0 0 0 2186000 1536400 2326700 1871900 2978200 3008000 5171400 0 3377400 4515300 2814 1492 2572 24208;24209;24210;24211;24212;24213;24214;24215;24216;24217 19081;19082;19083;19084 19084 4 ALEDRLESESAAK Unmodified 1417.7049 0.7048872 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 1 By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.59 3.05 3 14 1 2 1 1 1 1 1 1 1 2 2 1 1 1 35.307 34.799 2;3 0.002827 37169 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.009 22.682 163340000 0 13593000 25825000 3149500 1595300 11643000 4382800 3026100 3687600 12811000 22654000 24153000 6265700 4129000 26429000 2815 2291 2573 24218;24219;24220;24221;24222;24223;24224;24225;24226;24227;24228;24229;24230;24231;24232;24233;24234 19085;19086;19087;19088;19089;19090;19091 19087 5 ALEDVDYVQTFK Unmodified 1426.698 0.6980109 2888 Q6IN85 SMEK1 Serine/threonine-protein phosphatase 4 regulatory subunit 3A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.12 3.72 2 1 5 1 2 1 1 1 1 1 75.337 72.689 2 1.5898E-15 90851 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 180.67 154.16 300940000 8242700 273300000 0 0 0 0 3901800 5703600 0 0 0 0 0 9791400 0 2816 2888 2574 24235;24236;24237;24238;24239;24240;24241;24242 19092;19093;19094;19095;19096;19097;19098;19099;19100 19094 9 ALEDVVQR Unmodified 928.49779 0.49779495 2456 Q14966 ZNF638 Zinc finger protein 638 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.789 36.985 2 0.005818 41039 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 105.39 42.676 167690000 0 0 0 11685000 12081000 0 12665000 9651000 9054900 16775000 14374000 18477000 22456000 15976000 24499000 2817 2456 2575 24243;24244;24245;24246;24247;24248;24249;24250;24251;24252;24253;24254 19101;19102;19103;19104;19105;19106;19107;19108;19109 19106 7 ALEDVVQRSGHGTEFNK Unmodified 1885.9282 0.92823863 2456 Q14966 ZNF638 Zinc finger protein 638 yes yes 0 0 1 By MS/MS 2 0 1 1 56.255 48.108 3 0.0080335 65908 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.784 42.538 15145000 15145000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2818 2456 2576 24255 19110 19110 0 ALEEAGFK Unmodified 863.43888 0.43888309 1057 P17655 CAPN2 Calpain-2 catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.36 3.15 2 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 33.37 32.416 2 0.0087129 35752 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 85.265 18.272 1277500000 55036000 859030000 0 16399000 0 39146000 27462000 20812000 5052400 38858000 48417000 33260000 35427000 36842000 61788000 2819 1057 2577 24256;24257;24258;24259;24260;24261;24262;24263;24264;24265;24266;24267;24268;24269 19111;19112;19113;19114;19115;19116;19117;19118;19119 19118 7 ALEEALEAK Unmodified 972.51278 0.51277632 1357;1366 P35580;P35749 MYH10;MYH11 Myosin-10;Myosin-11 no no 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching 10 0 8 1 1 1 1 1 1 1 1 39.88 39.956 2 0.0076455 44366 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 71.877 28.811 33939000 0 0 0 4427200 3092600 5421600 3356500 0 3332700 4285300 4259900 5763500 0 0 0 2820 1357;1366 2578 24270;24271;24272;24273;24274;24275;24276;24277 19120 19120 1 ALEEAMEQK Oxidation (M) 1063.4856 0.48557529 1356 P35579 MYH9 Myosin-9 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 2 14 1 1 1 1 1 1 1 1 1 1 1 1 2 2 13.373 13.047 2 0.0020779 10126 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 92.439 64.953 1034400000 6663400 60061000 0 77309000 64493000 88923000 106460000 50849000 69254000 125670000 78909000 0 123660000 59476000 122620000 2821 1356 2579 24278;24279;24280;24281;24282;24283;24284;24285;24286;24287;24288;24289;24290;24291;24292;24293 19121;19122;19123;19124;19125;19126;19127;19128;19129;19130;19131;19132;19133;19134;19135;19136;19137;19138;19139 19136 2067 19 ALEEAMEQK Unmodified 1047.4907 0.49066067 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.72 2 13 1 1 1 1 1 1 2 1 1 1 1 1 1 1 26.837 26.29 2 1.1135E-08 27100 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 160.75 134.14 3305400000 8836800 243930000 0 158050000 280330000 299320000 283260000 181600000 176400000 266100000 350210000 348200000 254420000 212900000 241820000 2822 1356 2579 24294;24295;24296;24297;24298;24299;24300;24301;24302;24303;24304;24305;24306;24307;24308 19140;19141;19142;19143;19144;19145;19146;19147;19148;19149;19150;19151;19152;19153 19143 12 ALEEANADLEVK Unmodified 1300.6511 0.65106071 56;70;73;981;76 CON__P02533;P02533;CON__P08779;P08779;CON__P13646-1;CON__P19012;P19012;P13646;CON__ENSEMBL:ENSP00000377550 KRT14;KRT16;KRT15;KRT13 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16;Keratin, type I cytoskeletal 15;Keratin, type I cytoskeletal 13 no no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 2 16 1 1 3 1 1 1 2 1 2 1 1 1 1 1 48.556 48.705 2 1.3356E-54 55460 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 190.24 149.35 + 3015700000 1368300 0 316910 420830000 152350000 241040000 138360000 386040000 161720000 286920000 214070000 236510000 567020000 134620000 74524000 2823 56;70;73;76;981 2580 24309;24310;24311;24312;24313;24314;24315;24316;24317;24318;24319;24320;24321;24322;24323;24324;24325;24326 19154;19155;19156;19157;19158;19159;19160;19161;19162;19163;19164;19165;19166;19167;19168;19169;19170;19171;19172;19173;19174;19175;19176;19177;19178;19179;19180;19181;19182;19183;19184;19185;19186;19187;19188;19189;19190;19191;19192;19193;19194 19165 41 ALEEANALQEGHSVPEINSDTDK Unmodified 2466.151 0.15104051 4870 Q9UEE5 STK17A Serine/threonine-protein kinase 17A yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 67.423 62.12 3 2.764E-18 79616 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.373 68.336 23255000 0 23255000 0 0 0 0 0 0 0 0 0 0 0 0 0 2824 4870 2581 24327;24328 19195;19196 19195 2 ALEEANMK Oxidation (M) 920.42733 0.42733213 106 Q9C075;CON__Q9C075 KRT23 Keratin, type I cytoskeletal 23 yes no 0 1 0 By matching By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 7.4914 7.5092 2 0.040844 5655 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 43.814 29.828 + 8537900 0 0 0 5045000 873030 0 0 1983300 636510 0 0 0 0 0 0 2825 106 2582 24329;24330;24331;24332 19197 19197 139 1 ALEEANMK Unmodified 904.43242 0.43241751 106 Q9C075;CON__Q9C075 KRT23 Keratin, type I cytoskeletal 23 yes no 0 0 0 By MS/MS 10 0 1 1 19.53 19.384 2 0.037076 19905 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 94.006 67.21 + 8604500 0 0 0 8604500 0 0 0 0 0 0 0 0 0 0 0 2826 106 2582 24333 19198 19198 0 ALEEANTELEVK Unmodified 1344.6773 0.67727546 84 CON__Q04695;Q04695 KRT17 Keratin, type I cytoskeletal 17 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 2 1 1 1 1 1 1 1 1 1 1 1 49.235 49.333 2 2.4151E-26 55423 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 166.19 87.117 + 1164500000 0 0 0 189120000 62067000 64354000 61047000 68785000 40418000 59824000 96319000 96813000 256920000 59329000 109520000 2827 84 2583 24334;24335;24336;24337;24338;24339;24340;24341;24342;24343;24344;24345;24346 19199;19200;19201;19202;19203;19204;19205;19206;19207;19208;19209;19210;19211;19212;19213;19214;19215 19206 17 ALEEDLNQK Unmodified 1058.5244 0.52440364 586 O94804 STK10 Serine/threonine-protein kinase 10 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 29.211 27.016 2 0.004831 34020 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.41 43.413 23058000 0 19210000 0 0 0 3847700 0 0 0 0 0 0 0 0 0 2828 586 2584 24347;24348 19216;19217 19217 2 ALEEELAGLK Unmodified 1071.5812 0.58119023 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 0 0 By MS/MS 10 0 1 1 66.614 66.575 2 0.0047532 76326 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 71.692 19.956 35851000 0 0 0 0 0 35851000 0 0 0 0 0 0 0 0 0 2829 643 2585 24349 19218 19218 1 ALEEELEDLELGL Unmodified 1471.7294 0.72937061 4112 Q9BRP8 WIBG Partner of Y14 and mago yes yes 0 0 0 By MS/MS 2 0 1 1 98.811 90.68 2 0.016574 116968 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.465 48.235 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2830 4112 2586 24350 19219 19219 1 ALEEEQEAREELER Unmodified 1729.8119 0.81187146 3090 Q7Z406 MYH14 Myosin-14 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 47.318 47.107 3 0.017915 53626 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 33.195 13.089 11937000 0 0 0 7386500 0 0 0 4550600 0 0 0 0 0 0 0 2831 3090 2587 24351;24352 19220 19220 1 ALEEGLTPQEICDK Unmodified 1601.7607 0.76068752 1779 P56192 MARS Methionine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 62.001 61.326 2 2.3015E-23 76454 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 151.1 144.8 900720000 0 715230000 0 5375700 9211400 11241000 9296300 10807000 8593600 15993000 19596000 21723000 16556000 20850000 36253000 2832 1779 2588 24353;24354;24355;24356;24357;24358;24359;24360;24361;24362;24363;24364;24365;24366 19221;19222;19223;19224;19225;19226;19227;19228;19229;19230;19231;19232;19233;19234;19235;19236 19224 15 ALEEMESK Unmodified 935.427 0.42699778 4856 Q9UBS8 RNF14 E3 ubiquitin-protein ligase RNF14 yes yes 0 0 0 By MS/MS 2 0 1 1 21.899 18.016 2 0.014055 23827 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.492 59.471 48503000 0 48503000 0 0 0 0 0 0 0 0 0 0 0 0 0 2833 4856 2589 24367 19237 19237 1 ALEENNNFSK Unmodified 1164.5411 0.54111633 3705 Q93045 STMN2 Stathmin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.33 3.79 1 4 1 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 28.165 27.638 2 1.0492E-10 28214 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 167.33 0 4225600000 268720000 2778400000 20086000 9445300 9500000 8408400 28672000 13258000 9501600 17594000 239640000 264320000 29539000 167590000 361000000 2834 3705 2590 24368;24369;24370;24371;24372;24373;24374;24375;24376;24377;24378;24379;24380;24381;24382;24383;24384;24385 19238;19239;19240;19241;19242;19243;19244;19245;19246;19247;19248;19249;19250;19251;19252 19239 11 ALEEPGPAADPTAFQGPWAR Unmodified 2080.0014 0.0014035686 3204 Q86Y56 DNAAF5 Dynein assembly factor 5, axonemal yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 16 1 1 2 1 1 2 1 1 1 1 2 2 82.272 82.35 2;3 7.1441E-15 95332 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 114.56 104.78 164420000 0 0 0 2197700 4884900 24556000 4459600 7040800 11123000 12663000 9224600 13360000 4227100 25089000 45596000 2835 3204 2591 24386;24387;24388;24389;24390;24391;24392;24393;24394;24395;24396;24397;24398;24399;24400;24401 19253;19254;19255;19256;19257;19258;19259;19260 19255 7 ALEESESSQLISPPLAQAIR Unmodified 2138.1219 0.12191263 1446 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 83.827 83.892 2;3 3.8609E-104 96728 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 173.59 162.34 1233200000 0 0 0 21501000 91371000 90925000 71801000 93182000 111560000 166100000 145680000 143440000 74707000 81946000 140960000 2836 1446 2592 24402;24403;24404;24405;24406;24407;24408;24409;24410;24411;24412;24413;24414;24415;24416;24417;24418;24419;24420;24421;24422;24423;24424;24425 19261;19262;19263;19264;19265;19266;19267;19268;19269;19270;19271;19272;19273;19274;19275;19276;19277;19278;19279;19280;19281 19268 19 ALEESNYELEGK Unmodified 1380.6409 0.64088996 72;57 CON__P13645;P13645;CON__P02535-1 KRT10 Keratin, type I cytoskeletal 10 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.63 1.68 2 41 1 1 5 3 3 3 3 3 4 4 4 3 3 3 43.777 43.765 1;2 3.2632E-16 54171 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 152.97 139.17 + 74184000000 0 34352000 0 15280000000 4136100000 4923200000 4664200000 6489000000 3387800000 7588100000 5858900000 9288900000 6251500000 3527300000 2754600000 2837 72;57 2593 24426;24427;24428;24429;24430;24431;24432;24433;24434;24435;24436;24437;24438;24439;24440;24441;24442;24443;24444;24445;24446;24447;24448;24449;24450;24451;24452;24453;24454;24455;24456;24457;24458;24459;24460;24461;24462;24463;24464;24465;24466;24467;24468 19282;19283;19284;19285;19286;19287;19288;19289;19290;19291;19292;19293;19294;19295;19296;19297;19298;19299;19300;19301;19302;19303;19304;19305;19306;19307;19308;19309;19310;19311;19312;19313;19314;19315;19316;19317;19318;19319;19320;19321;19322;19323;19324;19325 19293 40 ALEESNYELEGKIK Unmodified 1621.8199 0.81991695 72;57 CON__P13645;P13645;CON__P02535-1 KRT10 Keratin, type I cytoskeletal 10 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 50.955 51.032 3 4.8906E-19 56720 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 99.941 80.337 + 123260000 0 0 0 25354000 0 0 17914000 32155000 0 0 0 47838000 0 0 0 2838 72;57 2594 24469;24470;24471;24472;24473;24474 19326;19327;19328;19329;19330;19331;19332 19330 7 ALEEVPIHIEDPPFPSLRQEK Unmodified 2443.2747 0.27472488 2833 Q5VZK9 LRRC16A Leucine-rich repeat-containing protein 16A yes yes 0 0 1 By MS/MS 2 0 1 1 90.332 82.201 4 0.017885 106778 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 21.901 19.253 10850000 10850000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2839 2833 2595 24475 19333;19334 19334 2 ALEFIPSDQQNEMVR Oxidation (M) 1791.8461 0.84614848 2425 Q14671 PUM1 Pumilio homolog 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 69.463 69.604 2 0.00084684 80242 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 56.359 50.7 43611000 0 0 0 0 0 9117900 8304200 0 0 0 8533100 0 9721600 7934600 0 2840 2425 2596 24476;24477;24478;24479;24480 19335;19336;19337;19338;19339;19340 19339 3974 6 ALEFIPSDQQNEMVR Unmodified 1775.8512 0.85123386 2425 Q14671 PUM1 Pumilio homolog 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.559 76.617 2 8.0434E-06 88503 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 101.93 87.771 86268000 0 0 0 2636300 3846500 5836200 3217900 7575700 4723500 7969300 6605400 10657000 8137400 8308700 16754000 2841 2425 2596 24481;24482;24483;24484;24485;24486;24487;24488;24489;24490;24491;24492 19341;19342;19343;19344;19345;19346;19347;19348;19349;19350;19351;19352 19346 12 ALEFVQTESQK Unmodified 1278.6456 0.6455814 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 50.006 50.14 2 9.666E-05 56775 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 125.56 85.941 42382000 0 0 0 3652200 0 0 6649300 0 0 0 0 0 8537600 7155600 16387000 2842 2446 2597 24493;24494;24495;24496;24497;24498;24499 19353;19354;19355;19356;19357;19358;19359 19353 7 ALEHFTDLYDIK Unmodified 1463.7296 0.72964538 2040 Q00610 CLTC Clathrin heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 75.773 75.84 3 0.00025227 86855 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.295 46.466 111680000 0 0 0 0 4033800 12519000 0 0 9698300 13183000 0 0 12590000 11498000 48158000 2843 2040 2598 24500;24501;24502;24503;24504;24505;24506 19360;19361;19362;19363;19364;19365 19362 6 ALEHFTDLYDIKR Unmodified 1619.8308 0.83075641 2040 Q00610 CLTC Clathrin heavy chain 1 yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 68.475 68.817 3 0.047259 78005 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 20.271 13.29 16991000 0 0 0 0 0 0 0 0 0 0 0 0 0 2149800 14841000 2844 2040 2599 24507;24508 19366 19366 1 ALEHLHSK Unmodified 933.50321 0.50321468 1688;1505 P46734;P52564 MAP2K3;MAP2K6 Dual specificity mitogen-activated protein kinase kinase 3;Dual specificity mitogen-activated protein kinase kinase 6 no no 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 9.6955 6.1808 2 0.00022348 10428 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 182.68 49.079 167850000 155120000 12737000 0 0 0 0 0 0 0 0 0 0 0 0 0 2845 1505;1688 2600 24509;24510 19367;19368;19369 19369 3 ALEHSALAINHK Unmodified 1302.7044 0.70443369 1061;4598 P17812;Q9NRF8 CTPS1;CTPS2 CTP synthase 1;CTP synthase 2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.5 3.88 7 2 11 4 3 2 1 1 1 1 1 1 1 1 1 2 30.547 28.436 2;3 3.1571E-97 41912 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 246.93 216.25 2075000000 1514300000 76336000 160530000 15118000 13997000 0 22654000 15003000 0 32304000 43023000 41833000 28569000 26721000 84528000 2846 1061;4598 2601 24511;24512;24513;24514;24515;24516;24517;24518;24519;24520;24521;24522;24523;24524;24525;24526;24527;24528;24529;24530 19370;19371;19372;19373;19374;19375;19376;19377;19378;19379;19380;19381;19382;19383;19384;19385;19386;19387;19388;19389 19379 16 ALEIADFSGNPLSR Unmodified 1488.7573 0.75725712 2381 Q14160 SCRIB Protein scribble homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 82.987 83.039 2 7.0868E-12 96094 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 126.19 71.13 110800000 0 0 0 2394100 6884800 9387600 6562300 8068800 6008700 14746000 11332000 15936000 14347000 15133000 0 2847 2381 2602 24531;24532;24533;24534;24535;24536;24537;24538;24539;24540;24541 19390;19391;19392;19393;19394;19395;19396;19397;19398;19399;19400;19401;19402;19403 19396 14 ALEIAQEMNIPEK Unmodified 1484.7545 0.75447993 4803 Q9P215 POGK Pogo transposable element with KRAB domain yes yes 0 0 0 By MS/MS 2 0 1 1 79.356 74.62 2 4.0695E-08 92922 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.97 84.647 122440000 0 122440000 0 0 0 0 0 0 0 0 0 0 0 0 0 2848 4803 2603 24542 19404 19404 1 ALEIAQEMNIPEK Oxidation (M) 1500.7494 0.74939455 4803 Q9P215 POGK Pogo transposable element with KRAB domain yes yes 0 1 0 By MS/MS 3 0 1 1 59.845 55.026 2 0.032942 67676 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 44.203 35.509 2342000 0 2342000 0 0 0 0 0 0 0 0 0 0 0 0 0 2849 4803 2603 24543 19405 19405 1 ALEICGAQRSASELTAGAEAEAEEVK Unmodified 2689.2865 0.28648814 4339 Q9H0U9 TSPYL1 Testis-specific Y-encoded-like protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 80.73 78.202 3 0.00029035 94865 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 24.068 16.875 2588000 0 0 2588000 0 0 0 0 0 0 0 0 0 0 0 0 2850 4339 2604 24544 19406 19406 1 ALEICQQR Unmodified 1016.5073 0.50731378 1594 P49754 VPS41 Vacuolar protein sorting-associated protein 41 homolog yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 34.371 34.571 2 0.017995 38519 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 64.803 4.0434 73860000 0 0 0 3502300 6104700 0 4490900 5344500 6981800 7036400 8699200 10678000 6328200 6527000 8166300 2851 1594 2605 24545;24546;24547;24548;24549;24550;24551;24552;24553;24554;24555 19407 19407 1 ALEIIPR Unmodified 810.49634 0.49633839 4065 Q99832 CCT7 T-complex protein 1 subunit eta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.139 59.251 2 0.017142 67763 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 114.54 47.546 2855900000 0 0 0 124030000 132180000 249500000 205460000 198490000 148640000 277490000 314600000 227820000 262070000 263200000 452390000 2852 4065 2606 24556;24557;24558;24559;24560;24561;24562;24563;24564;24565;24566;24567 19408;19409;19410;19411;19412;19413;19414;19415;19416;19417;19418;19419;19420;19421;19422;19423;19424;19425;19426;19427;19428 19409 21 ALEIITDFSGIVLEK Unmodified 1646.9131 0.91308906 5245 Q9Y5Q9 GTF3C3 General transcription factor 3C polypeptide 3 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 98.15 94.638 2 9.4877E-08 117242 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 112.51 79.316 4230600 4230600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2853 5245 2607 24568;24569 19429;19430 19430 2 ALEIYATR Unmodified 935.50763 0.50763136 4321 Q9H0B6 KLC2 Kinesin light chain 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 46.979 47.03 2 0.016961 52646 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 66.429 34.587 143240000 0 0 0 9993500 11013000 15548000 12541000 11980000 10993000 18379000 17830000 0 22537000 12427000 0 2854 4321 2608 24570;24571;24572;24573;24574;24575;24576;24577;24578;24579 19431;19432;19433;19434;19435;19436;19437;19438 19435 8 ALEIYQTK Unmodified 964.52295 0.52294707 2143 Q07866 KLC1 Kinesin light chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.161 41.34 2 0.004651 46995 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 109.86 64.145 168830000 0 0 0 11215000 13346000 16008000 13562000 10900000 7901300 13431000 16248000 17159000 12276000 11324000 25458000 2855 2143 2609 24580;24581;24582;24583;24584;24585;24586;24587;24588;24589;24590;24591 19439;19440;19441;19442;19443;19444;19445;19446;19447;19448;19449 19448 9 ALEKEEEEEK Unmodified 1232.5772 0.57722707 494 O75400 PRPF40A Pre-mRNA-processing factor 40 homolog A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 7.3905 7.4771 3 0.0013257 5431 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 83.862 70.053 47531000 0 0 0 0 0 0 17344000 0 0 0 0 30187000 0 0 0 2856 494 2610 24592;24593;24594 19450;19451;19452 19451 2 ALELCEILAK Unmodified 1158.6318 0.63184559 1567 P49354 FNTA Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 87.87 84.218 2 0.0092093 104765 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.37 55.76 35259000 0 33732000 1527300 0 0 0 0 0 0 0 0 0 0 0 0 2857 1567 2611 24595;24596 19453;19454 19453 2 ALELDGQSVK Unmodified 1058.5608 0.56078914 5029 Q9UNE7 STUB1 E3 ubiquitin-protein ligase CHIP yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 44.789 43.994 2 0.003098 48292 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 77.732 14.167 286320000 0 86412000 0 16883000 12451000 8935600 8841000 16572000 8183700 14066000 27268000 0 0 22278000 64425000 2858 5029 2612 24597;24598;24599;24600;24601;24602;24603;24604;24605;24606;24607;24608;24609 19455;19456;19457;19458;19459;19460;19461;19462;19463;19464;19465;19466;19467 19464 13 ALELDHK Unmodified 824.43922 0.43921744 4035 Q99615 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 2 1 1 1 1 1 1 16.253 16.476 2 0.039143 15572 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 69.176 6.0281 141360000 0 0 0 8160900 6534900 0 0 15867000 7815000 0 21232000 15281000 15973000 18230000 32269000 2859 4035 2613 24610;24611;24612;24613;24614;24615;24616;24617;24618;24619 19468;19469;19470 19470 3 ALELDPDNETYK Unmodified 1406.6565 0.65654002 364 O43765 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 2 2 2 2 60.216 54.162 2 2.865E-05 69472 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.75 122.1 614720000 46265000 568460000 0 0 0 0 0 0 0 0 0 0 0 0 0 2860 364 2614 24620;24621;24622;24623 19471;19472;19473;19474;19475 19471 5 ALELDQERK Unmodified 1100.5826 0.58258722 1345 P35241 RDX Radixin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 27.936 23.619 2 0.025099 33277 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 102.51 53.952 353030000 33563000 272580000 46880000 0 0 0 0 0 0 0 0 0 0 0 0 2861 1345 2615 24624;24625;24626;24627 19476;19477;19478 19477 3 ALELDSNLYR Unmodified 1192.6088 0.60880197 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.475 66.56 2 1.8539E-84 76192 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 210.26 173.86 4155500000 0 0 0 194830000 300830000 380800000 284630000 322550000 255420000 356880000 427860000 485750000 358540000 323830000 463590000 2862 1356 2616 24628;24629;24630;24631;24632;24633;24634;24635;24636;24637;24638;24639 19479;19480;19481;19482;19483;19484;19485;19486;19487;19488;19489;19490;19491;19492;19493;19494;19495;19496 19482 17 ALELDSNLYRIGQSK Unmodified 1705.8999 0.89989861 1356 P35579 MYH9 Myosin-9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 79.246 73.325 2;3 1.1452E-40 94681 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 151.54 116.74 201190000 124490000 53247000 23456000 0 0 0 0 0 0 0 0 0 0 0 0 2863 1356 2617 24640;24641;24642;24643 19497;19498;19499;19500 19499 4 ALELDSNNEK Unmodified 1131.5408 0.54078198 2080 Q02790 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.65 3.66 1 3 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 32.86 32.43 2 4.3072E-11 35359 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 162.49 113.93 5010900000 284060000 3617400000 0 49917000 39126000 88481000 63473000 55026000 46309000 84065000 144540000 129970000 79479000 109040000 220010000 2864 2080 2618 24644;24645;24646;24647;24648;24649;24650;24651;24652;24653;24654;24655;24656;24657;24658;24659;24660 19501;19502;19503;19504;19505;19506;19507;19508;19509;19510;19511;19512;19513;19514;19515;19516;19517 19510 15 ALELEEFQYIGESQGYDIMEPAAK Oxidation (M) 2746.2684 0.26837846 1474 P43246 MSH2 DNA mismatch repair protein Msh2 yes yes 0 1 0 By MS/MS 2 0 1 1 93.216 85.086 3 0.00013979 110186 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.783 47.513 20777000 20777000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2865 1474 2619 24661 19518 19518 2316 1 ALELEEFQYIGESQGYDIMEPAAK Unmodified 2730.2735 0.27346383 1474 P43246 MSH2 DNA mismatch repair protein Msh2 yes yes 0 0 0 By MS/MS 2 0 1 1 96.682 88.551 3 1.256E-98 114395 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 112.85 107.29 37076000 37076000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2866 1474 2619 24662 19519 19519 1 ALELENDRLLLK Unmodified 1425.8191 0.81912909 2094 Q03252 LMNB2 Lamin-B2 yes yes 0 0 1 By MS/MS 10 0 1 1 73.925 74.264 3 0.0096979 85086 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.544 28.857 6172100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6172100 2867 2094 2620 24663 19520 19520 1 ALELEQERK Unmodified 1114.5982 0.59823728 1198 P26038 MSN Moesin yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24.505 23.714 2 0.023776 23572 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 135.83 67.933 232430000 9949500 27209000 33466000 4190500 2964700 2673700 4825100 3520400 1785100 5311500 0 25174000 12069000 22346000 76950000 2868 1198 2621 24664;24665;24666;24667;24668;24669;24670;24671;24672;24673;24674;24675;24676;24677 19521;19522;19523;19524;19525;19526 19521 5 ALELLYLPENK Unmodified 1301.7231 0.72310344 358 O43709 WBSCR22 Probable 18S rRNA (guanine-N(7))-methyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 84.047 84.072 2 0.00029633 97422 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 90.15 61.424 48057000 0 0 0 4173800 3167700 7867500 0 5585400 0 5325900 0 6550300 3611600 4608200 7166500 2869 358 2622 24678;24679;24680;24681;24682;24683;24684;24685;24686;24687;24688 19527;19528;19529;19530;19531;19532;19533;19534;19535;19536 19527 10 ALELNMLSLK Oxidation (M) 1146.6318 0.63184559 5261 Q9Y617 PSAT1 Phosphoserine aminotransferase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.2 3.92 3 2 1 1 1 1 1 80.672 75.536 2 0.0080876 87381 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.221 33.352 285000000 33133000 233100000 18770000 0 0 0 0 0 0 0 0 0 0 0 0 2870 5261 2623 24689;24690;24691;24692;24693 19537;19538;19539;19540;19541;19542 19539 6659 5 ALELNMLSLK Unmodified 1130.6369 0.63693097 5261 Q9Y617 PSAT1 Phosphoserine aminotransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 4 1 2 1 89.219 84.151 2 0.0018332 107448 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 108.98 72.582 236200000 52324000 171450000 12424000 0 0 0 0 0 0 0 0 0 0 0 0 2871 5261 2623 24694;24695;24696;24697 19543;19544 19544 1 ALELQPGYIR Unmodified 1158.6397 0.63970816 1627 P50542 PEX5 Peroxisomal targeting signal 1 receptor yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 67.712 67.722 2 0.0012374 77764 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 108.46 79.299 104350000 0 0 0 8173000 7614400 0 10869000 11406000 7221700 14131000 16147000 0 16973000 11821000 0 2872 1627 2624 24698;24699;24700;24701;24702;24703;24704;24705;24706 19545;19546;19547;19548;19549 19548 5 ALELSGTAVPPDLEK Unmodified 1538.8192 0.81918867 3041 Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 76.216 75.687 2 2.031E-70 87472 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 179.35 161.49 654800000 0 265510000 0 17133000 25881000 30392000 32237000 26444000 24981000 41349000 43880000 46816000 27195000 34106000 38874000 2873 3041 2625 24707;24708;24709;24710;24711;24712;24713;24714;24715;24716;24717;24718;24719;24720 19550;19551;19552;19553;19554;19555;19556;19557;19558;19559;19560;19561;19562;19563;19564;19565;19566;19567;19568;19569;19570;19571;19572;19573;19574;19575;19576;19577;19578;19579;19580;19581;19582;19583;19584;19585 19557 35 ALELTGLK Unmodified 843.50657 0.50656873 1085 P19338 NCL Nucleolin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 60.17 58.837 2 0.0079876 65734 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 87.754 25.037 3345300000 117920000 2130100000 80671000 69021000 63963000 46812000 78462000 65467000 62866000 79532000 108100000 120490000 106430000 80876000 134600000 2874 1085 2626 24721;24722;24723;24724;24725;24726;24727;24728;24729;24730;24731;24732;24733;24734;24735;24736 19586;19587;19588;19589;19590;19591;19592;19593;19594;19595;19596;19597;19598;19599 19599 14 ALEMVPLLTSTK Oxidation (M) 1317.7214 0.72138888 1636 P50748 KNTC1 Kinetochore-associated protein 1 yes yes 0 1 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 78.333 74.726 2 0.0051149 93228 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.2 39.982 51898000 0 49826000 2072300 0 0 0 0 0 0 0 0 0 0 0 0 2875 1636 2627 24737;24738;24739 19600;19601 19600 2625 2 ALEMVPLLTSTK Unmodified 1301.7265 0.72647426 1636 P50748 KNTC1 Kinetochore-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 1.75 0.433 1 3 2 1 1 86.218 83.669 2 3.2405E-05 105794 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.52 68.567 118820000 4774100 112200000 1848900 0 0 0 0 0 0 0 0 0 0 0 0 2876 1636 2627 24740;24741;24742;24743 19602;19603 19602 2 ALENDFFNSPPRK Unmodified 1533.7576 0.75759147 4753 Q9NYV6 RRN3 RNA polymerase I-specific transcription initiation factor RRN3 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 2 1 58.988 59.118 3 0.00086236 67346 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 49.12 44.612 47200000 0 0 0 0 3368900 5451600 4755800 5730700 3517200 7964300 7456100 8955600 0 0 0 2877 4753 2628 24744;24745;24746;24747;24748;24749;24750;24751;24752;24753;24754;24755 19604;19605;19606;19607;19608;19609;19610;19611;19612;19613;19614;19615;19616;19617 19606 14 ALENDPDCR Unmodified 1088.4557 0.45567214 986;985 P13797;P13796 PLS3;LCP1 Plastin-3;Plastin-2 no no 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.415 13.571 2 0.0051666 12172 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.548 76.068 237760000 0 0 0 13945000 7922300 23870000 12876000 6228700 10879000 18005000 28780000 23052000 16595000 25111000 50492000 2878 986;985 2629 24756;24757;24758;24759;24760;24761;24762;24763;24764;24765;24766;24767 19618;19619;19620;19621;19622 19618 5 ALENDPDCRHVIPMNPNTDDLFK Unmodified 2710.2479 0.24793456 986 P13797 PLS3 Plastin-3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.5 0.5 2 2 2 1 1 80.906 76.456 3;4 4.0374E-19 97763 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.54 92.972 49983000 38349000 5230800 6402800 0 0 0 0 0 0 0 0 0 0 0 0 2879 986 2630 24768;24769;24770;24771 19623;19624;19625 19624 2 ALENDPDCRHVIPMNPNTDDLFK Oxidation (M) 2726.2428 0.24284918 986 P13797 PLS3 Plastin-3 yes yes 0 1 1 By MS/MS By MS/MS 2 0 3 2 1 76.449 70.044 3;4 5.5606E-05 87366 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 53.266 47.236 202870000 163450000 0 39422000 0 0 0 0 0 0 0 0 0 0 0 0 2880 986 2630 24772;24773;24774 19626;19627;19628 19628 1331 2 ALEPLEGLETMR Unmodified 1357.6912 0.69115139 1246 P29372 MPG DNA-3-methyladenine glycosylase yes yes 0 0 0 By matching By matching By MS/MS By matching By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 81.589 81.668 2 0.0089722 94128 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.284 29.19 27242000 0 0 0 1310700 0 0 0 3441200 0 3954700 3947600 3786500 0 2274800 8526100 2881 1246 2631 24775;24776;24777;24778;24779;24780;24781 19629 19629 1 ALEPTGQSGEAVK Unmodified 1285.6514 0.65139506 3580 Q8WX92 NELFB Negative elongation factor B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27.152 26.605 2 8.8111E-16 28568 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 148.32 120.58 623120000 7392600 43862000 0 25089000 32472000 50266000 43542000 45098000 34665000 59186000 62166000 44812000 64717000 46101000 63748000 2882 3580 2632 24782;24783;24784;24785;24786;24787;24788;24789;24790;24791;24792;24793;24794;24795 19630;19631;19632;19633;19634;19635;19636;19637;19638;19639;19640;19641;19642;19643;19644 19638 14 ALEQKPDDAQYYCQR Unmodified 1883.8472 0.84721111 5131 Q9Y2Z0 SUGT1 Suppressor of G2 allele of SKP1 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.707 34.89 3 5.8523E-27 37306 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 97.223 93.058 249400000 0 0 0 10838000 9293900 16541000 19060000 22239000 11738000 27270000 24078000 28278000 12312000 27612000 40138000 2883 5131 2633 24796;24797;24798;24799;24800;24801;24802;24803;24804;24805;24806;24807 19645;19646;19647;19648;19649;19650;19651;19652;19653;19654;19655;19656;19657 19649 13 ALEQLNGFELAGRPMK Oxidation (M) 1788.9193 0.91925384 2410 Q14498 RBM39 RNA-binding protein 39 yes yes 0 1 1 By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 2 1 1 1 2 1 1 2 1 2 2 2 72.104 72.18 2;3 8.1964E-08 83056 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 91.313 64.64 352010000 0 0 0 29870000 1908800 4866000 2701400 51294000 3683400 5654500 59567000 8208200 61844000 53429000 68983000 2884 2410 2634 24808;24809;24810;24811;24812;24813;24814;24815;24816;24817;24818;24819;24820;24821;24822;24823;24824;24825 19658;19659;19660;19661;19662;19663;19664;19665;19666 19658 3952 8 ALEQLNGFELAGRPMK Unmodified 1772.9243 0.92433922 2410 Q14498 RBM39 RNA-binding protein 39 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.437 76.545 3 0.0008305 88719 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 52.522 45.391 139640000 0 0 0 0 2905800 10469000 3913300 14824000 8928100 9506800 12047000 10374000 8782400 11028000 46864000 2885 2410 2634 24826;24827;24828;24829;24830;24831;24832;24833;24834;24835;24836 19667;19668;19669;19670;19671;19672;19673;19674;19675;19676;19677;19678 19676 10 ALEQNSLDSFVGK Unmodified 1406.7042 0.70415892 5318 yes yes 0 0 0 By MS/MS 10 0 1 1 49.361 50.072 2 0.0015974 55611 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.338 53.133 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2886 5318 2635 24837 19679 19679 1 ALEQQVEEMK Oxidation (M) 1219.5755 0.57545293 1356 P35579 MYH9 Myosin-9 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 13 2 1 1 1 1 1 1 2 1 1 1 26.3 26.469 2 0.00041401 28186 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 122.52 113.98 117750000 0 0 0 16683000 10608000 8712600 11027000 0 5404200 7486000 9223200 36000000 8524100 4077200 0 2887 1356 2636 24838;24839;24840;24841;24842;24843;24844;24845;24846;24847;24848;24849;24850 19680;19681;19682;19683;19684;19685;19686;19687;19688;19689;19690 19688 2068 9 ALEQQVEEMK Unmodified 1203.5805 0.58053831 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 44.083 44.176 2 0.00051215 50076 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 144.09 114.94 128720000 0 0 0 13265000 12569000 9444500 0 12922000 11261000 10164000 0 22971000 17754000 18368000 0 2888 1356 2636 24851;24852;24853;24854;24855;24856;24857;24858;24859 19691;19692;19693;19694;19695;19696;19697;19698;19699;19700;19701;19702;19703 19702 12 ALERFLQDYFDGNLK Unmodified 1827.9155 0.91554867 1270 P30101 PDIA3 Protein disulfide-isomerase A3 yes yes 0 0 1 By MS/MS 3 0 1 1 91.845 88.625 3 0.024024 106068 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 28.089 23.208 4610000 0 4610000 0 0 0 0 0 0 0 0 0 0 0 0 0 2889 1270 2637 24860 19704 19704 1 ALERLEGVEGVAHIIDPK Unmodified 1945.0633 0.063275544 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 1 By MS/MS 2 0 1 1 86.13 78 3 0.0016655 101737 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.598 34.502 21169000 21169000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2890 2392 2638 24861 19705 19705 1 ALERPYTSK Unmodified 1063.5662 0.56620887 4591 Q9NR45 NANS Sialic acid synthase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 20.534 16.824 2 0.0056526 24312 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 138.26 80.065 188550000 156720000 16132000 15700000 0 0 0 0 0 0 0 0 0 0 0 0 2891 4591 2639 24862;24863;24864 19706;19707;19708 19707 1 ALESDMAPVLIMATNR 2 Oxidation (M) 1762.8594 0.8593557 5077 Q9Y230 RUVBL2 RuvB-like 2 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 1 1 2 69.385 69.463 2 4.1673E-21 80283 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 113.99 113.99 163800000 0 0 0 8380400 9739400 15809000 13288000 8145300 9840500 15087000 18628000 23849000 14316000 12141000 14580000 2892 5077 2640 24865;24866;24867;24868;24869;24870;24871;24872;24873;24874;24875;24876;24877 19709;19710;19711;19712;19713;19714;19715;19716;19717;19718;19719;19720;19721;19722;19723;19724;19725;19726;19727;19728 19718 6461;6462 20 ALESDMAPVLIMATNR Oxidation (M) 1746.8644 0.86444108 5077 Q9Y230 RUVBL2 RuvB-like 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 47 2 4 5 5 3 5 4 3 4 4 4 4 80.725 80.802 2;3 6.7004E-29 92242 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 141.38 128.03 459060000 0 0 0 8253500 24716000 39644000 32134000 24831000 32447000 48993000 33889000 53504000 28078000 38541000 94030000 2893 5077 2640 24878;24879;24880;24881;24882;24883;24884;24885;24886;24887;24888;24889;24890;24891;24892;24893;24894;24895;24896;24897;24898;24899;24900;24901;24902;24903;24904;24905;24906;24907;24908;24909;24910;24911;24912;24913;24914;24915;24916;24917;24918;24919;24920;24921;24922;24923;24924 19729;19730;19731;19732;19733;19734;19735;19736;19737;19738;19739;19740;19741;19742;19743;19744;19745;19746;19747;19748;19749;19750;19751;19752;19753;19754;19755;19756 19751 6461;6462 25 ALESDMAPVLIMATNR Unmodified 1730.8695 0.86952646 5077 Q9Y230 RUVBL2 RuvB-like 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 2 2 2 2 1 2 2 2 2 2 2 88.525 88.609 2;3 8.2081E-20 102065 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 110.29 93.268 188310000 0 0 0 1027200 7132400 9809500 4453500 13069000 6984500 19089000 18742000 17040000 7596700 16836000 66531000 2894 5077 2640 24925;24926;24927;24928;24929;24930;24931;24932;24933;24934;24935;24936;24937;24938;24939;24940;24941;24942;24943;24944;24945;24946 19757;19758;19759;19760;19761;19762;19763;19764;19765;19766;19767;19768;19769;19770;19771;19772;19773 19767 16 ALESGDVNTVWK Unmodified 1317.6565 0.65648044 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.972 59.085 2 3.366E-08 68299 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 125.48 94.107 1516800000 0 0 0 138010000 96487000 144180000 119270000 96865000 89612000 153270000 177020000 126510000 105810000 103260000 166540000 2895 1518 2641 24947;24948;24949;24950;24951;24952;24953;24954;24955;24956;24957;24958 19774;19775;19776;19777;19778;19779;19780;19781;19782;19783;19784;19785;19786;19787;19788;19789;19790;19791;19792 19791 19 ALESIEYVQTFK Unmodified 1426.7344 0.73439641 2748 Q5MIZ7 SMEK2 Serine/threonine-protein phosphatase 4 regulatory subunit 3B yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS 7.7 3.52 2 1 7 2 1 1 1 1 1 1 1 1 77.455 76.634 2 2.636E-24 94548 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 173.32 155.85 116990000 0 94290000 0 0 1778500 0 1941300 1981000 0 4138900 3007600 0 2644200 0 7208500 2896 2748 2642 24959;24960;24961;24962;24963;24964;24965;24966;24967;24968 19793;19794;19795;19796;19797 19793 5 ALESPERPFLAILGGAK Unmodified 1767.9883 0.98831969 733 P00558 PGK1 Phosphoglycerate kinase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 3 6 2 1 1 1 1 1 2 88.799 87.46 2;3 9.9574E-14 100547 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.51 66.728 210410000 9666200 19921000 0 0 0 0 0 0 1097600 0 6215400 5312800 0 3772700 164420000 2897 733 2643 24969;24970;24971;24972;24973;24974;24975;24976;24977 19798;19799;19800;19801;19802;19803;19804 19800 6 ALESSIAPIVIFASNR Unmodified 1686.9305 0.93047046 5086 Q9Y265 RUVBL1 RuvB-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 92.71 92.784 2;3 4.4487E-15 107135 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 102.4 86.147 193230000 0 0 0 2099400 6088200 9625400 5481500 12726000 7490300 27579000 19855000 21404000 7025500 15665000 58191000 2898 5086 2644 24978;24979;24980;24981;24982;24983;24984;24985;24986;24987;24988;24989;24990;24991;24992;24993;24994;24995;24996;24997;24998;24999;25000;25001 19805;19806;19807;19808;19809;19810;19811;19812;19813;19814;19815;19816;19817;19818;19819;19820;19821;19822;19823;19824;19825 19819 15 ALETCGGDLK Unmodified 1062.5016 0.5015597 1483 P43897 TSFM Elongation factor Ts, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 29.7 25.306 2 0.021422 33043 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 63.816 46.431 62575000 0 62575000 0 0 0 0 0 0 0 0 0 0 0 0 0 2899 1483 2645 25002 19826 19826 1 ALETDSVSGVSK Unmodified 1191.5983 0.59829686 2477 Q15022 SUZ12 Polycomb protein SUZ12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.61 31.785 2 2.3636E-05 34628 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 102.06 71.449 63041000 0 0 0 4520600 5022600 6968000 4956700 4306300 3621400 6329700 6482000 8030000 5652700 0 7151300 2900 2477 2646 25003;25004;25005;25006;25007;25008;25009;25010;25011;25012;25013;25014 19827;19828;19829;19830;19831;19832;19833;19834;19835;19836;19837;19838 19829 11 ALETIGANLQK Unmodified 1156.6452 0.64518747 3304 Q8N122 RPTOR Regulatory-associated protein of mTOR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.55 1 1 4 2 1 1 1 1 53.664 51.658 2 9.2593E-10 66406 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 146.58 103.71 139830000 0 120840000 0 0 0 8143100 0 0 4126900 0 6715200 0 0 0 0 2901 3304 2647 25015;25016;25017;25018;25019;25020 19839;19840;19841;19842;19843 19840 5 ALETNTHVK Unmodified 1011.5349 0.53490874 4746 Q9NYL9;Q9NZR1 TMOD3;TMOD2 Tropomodulin-3;Tropomodulin-2 yes no 0 0 0 By matching By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 13.987 10.709 2 0.00045211 14566 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.98 105.2 352140000 56007000 172400000 123740000 0 0 0 0 0 0 0 0 0 0 0 0 2902 4746 2648 25021;25022;25023;25024 19844;19845;19846;19847 19845 3 ALETVQER Unmodified 944.49271 0.49270958 3954 Q96QA5 GSDMA Gasdermin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 19.364 19.531 2 0.011003 19526 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 77.923 31.259 120120000 0 0 0 42878000 5837800 5196500 6078400 8670800 4112000 11304000 0 20860000 7072400 3884600 4227100 2903 3954 2649 25025;25026;25027;25028;25029;25030;25031;25032;25033;25034;25035 19848;19849;19850;19851;19852;19853 19851 6 ALETVQERK Unmodified 1072.5877 0.58767259 3954 Q96QA5 GSDMA Gasdermin-A yes yes 0 0 1 By MS/MS 10 0 1 1 12.595 12.459 2 0.032429 11709 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 91.853 40.066 7523300 0 0 0 7523300 0 0 0 0 0 0 0 0 0 0 0 2904 3954 2650 25036 19854 19854 0 ALEVAEYLTPVLK Unmodified 1444.8177 0.81773211 4632 Q9NT62 ATG3 Ubiquitin-like-conjugating enzyme ATG3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.56 3.62 4 1 11 3 2 1 1 1 1 1 1 1 1 1 1 1 91.533 90.49 2;3 1.24E-29 112819 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 162.36 144.05 582530000 0 485280000 18617000 0 2768500 4647700 2874600 4351800 3118300 14611000 9383600 6636000 3638000 5950000 20654000 2905 4632 2651 25037;25038;25039;25040;25041;25042;25043;25044;25045;25046;25047;25048;25049;25050;25051;25052 19855;19856;19857;19858;19859;19860;19861;19862;19863;19864;19865;19866;19867;19868;19869;19870;19871;19872;19873;19874 19858 20 ALEVPNQPFK Unmodified 1141.6132 0.61315906 5402 yes yes 0 0 0 By matching By MS/MS 10 0 3 1 2 33.318 33.389 3 0.045026 35469 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 28.013 14.32 + 8720600 0 0 0 2803900 0 0 0 0 0 0 0 0 0 5916700 0 2906 5402 2652 25053;25054;25055 19875 19875 1 ALEVSEDVK Unmodified 988.50769 0.50769094 5031 Q9UNF1 MAGED2 Melanoma-associated antigen D2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.89 2.72 3 1 24 1 2 1 2 2 2 2 2 2 2 2 2 2 2 2 36.015 35.462 1;2 0.0032531 39047 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 90.657 34.646 2652300000 37980000 656570000 2660300 110630000 114570000 153770000 128930000 126910000 119870000 169590000 170190000 213740000 191220000 174100000 281620000 2907 5031 2653 25056;25057;25058;25059;25060;25061;25062;25063;25064;25065;25066;25067;25068;25069;25070;25071;25072;25073;25074;25075;25076;25077;25078;25079;25080;25081;25082;25083 19876;19877;19878;19879;19880;19881;19882;19883;19884;19885;19886;19887;19888;19889;19890;19891;19892;19893;19894;19895;19896;19897;19898 19878 21 ALEVYDLIR Unmodified 1090.6023 0.60226003 4410 Q9H5X1 FAM96A MIP18 family protein FAM96A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.951 83.015 2 0.0030483 96379 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 91.318 25.245 196400000 0 0 0 4847700 8576800 12347000 9041100 11589000 10570000 14630000 22035000 15597000 21845000 22775000 42545000 2908 4410 2654 25084;25085;25086;25087;25088;25089;25090;25091;25092;25093;25094;25095 19899;19900;19901;19902;19903;19904;19905;19906;19907;19908;19909;19910;19911 19908 13 ALEYTIYNQELNETR Unmodified 1855.8952 0.89520716 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.429 73.497 2 2.2281E-20 84692 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 116.13 101.57 250630000 0 0 0 10562000 14314000 28476000 12863000 16769000 16649000 31695000 25856000 21640000 12642000 19851000 39313000 2909 5071 2655 25096;25097;25098;25099;25100;25101;25102;25103;25104;25105;25106;25107 19912;19913;19914;19915;19916;19917;19918;19919;19920;19921;19922;19923;19924;19925;19926;19927;19928 19914 17 ALFAGDIEEMEERREK Unmodified 1921.9204 0.92037606 4086 Q9BQ52 ELAC2 Zinc phosphodiesterase ELAC protein 2 yes yes 0 0 2 By MS/MS 2 0 1 1 78.033 69.903 4 0.003823 91870 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.995 30.857 47237000 47237000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2910 4086 2656 25108 19929 19929 1 ALFDFNGNDEEDLPFK Unmodified 1869.8421 0.84210896 1499 P46108 CRK Adapter molecule crk yes yes 0 0 0 By MS/MS 10 0 1 1 90.402 90.541 2 0.032532 104917 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.917 34.072 2027800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2027800 2911 1499 2657 25109 19930 19930 1 ALFEEVPELLTEAEK Unmodified 1716.8822 0.88218286 1307 P31939 ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 2.8 1.97 10 4 1 4 8 2 1 97.477 93.27 2;3 1.4221E-30 115379 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 152.14 136.83 2801400000 985860000 1645200000 167970000 0 0 0 0 0 0 0 0 0 0 0 2301000 2912 1307 2658 25110;25111;25112;25113;25114;25115;25116;25117;25118;25119;25120;25121;25122;25123;25124 19931;19932;19933;19934;19935;19936;19937;19938;19939;19940;19941;19942;19943;19944;19945;19946;19947;19948 19931 15 ALFIVPR Unmodified 814.50651 0.50650915 4490 Q9HAU5 UPF2 Regulator of nonsense transcripts 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.812 72.881 2 0.02563 83582 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 80.377 10.988 101050000 0 0 0 7647900 7071700 7907500 8337800 5924800 4558300 11168000 8534900 11456000 7476700 8434500 12535000 2913 4490 2659 25125;25126;25127;25128;25129;25130;25131;25132;25133;25134;25135;25136 19949;19950;19951;19952;19953;19954;19955;19956 19951 8 ALFPAFAGLSEAPDGGSSRK Acetyl (Protein N-term) 2019.0062 0.0061545955 4439 Q9H7Z3 NRDE2 Protein NRDE2 homolog yes yes 1 0 1 By MS/MS By MS/MS 10 0 2 1 1 94.104 94.272 2 1.6403E-05 109381 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.522 72.611 2282600 0 0 0 0 0 0 0 815320 0 0 0 0 0 0 1467300 2914 4439 2660 25137;25138 19957 19957 1 ALFPGDSEIDQLFR Unmodified 1606.7991 0.79912193 1180 P24941 CDK2 Cyclin-dependent kinase 2 no no 0 0 0 By MS/MS 10 0 1 1 93.657 93.798 2 0.022388 108762 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.542 50.584 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2915 1180 2661 25139 19958 19958 1 ALFPSTAQAQAAVQGPVGTDFK Unmodified 2203.1273 0.12733236 352 O43670 ZNF207 BUB3-interacting and GLEBS motif-containing protein ZNF207 yes yes 0 0 0 By MS/MS By MS/MS 6.5 3.5 1 1 1 1 84.969 81.735 3 0.0067234 97909 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 28.202 20.21 6628000 0 6628000 0 0 0 0 0 0 0 0 0 0 0 0 0 2916 352 2662 25140;25141 19959;19960 19959 2 ALFQLSR Unmodified 833.47594 0.4759373 4387 Q9H3U1 UNC45A Protein unc-45 homolog A yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.987 62.087 2 0.043233 70918 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 67.344 32.627 134660000 0 0 0 7252700 8312900 15654000 9766900 8580800 6390100 11912000 10923000 14359000 10189000 9488400 21834000 2917 4387 2663 25142;25143;25144;25145;25146;25147;25148;25149;25150;25151;25152;25153 19961;19962 19962 2 ALFTYPK Unmodified 838.45889 0.45889025 3794 Q96DE5 ANAPC16 Anaphase-promoting complex subunit 16 yes yes 0 0 0 By MS/MS 10 0 1 1 57.272 57.884 2 0.048847 65145 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.803 49.783 13034000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13034000 2918 3794 2664 25154 19963 19963 1 ALGAEIVR Unmodified 827.4865 0.48650199 910 P0DN79;P35520 CBS Cystathionine beta-synthase yes no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 2 1 1 1 1 1 41.743 42.007 2 0.0051988 46387 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 115.46 56.64 165250000 0 0 0 0 0 41133000 5110400 0 11954000 0 49294000 35306000 22450000 0 0 2919 910 2665 25155;25156;25157;25158;25159;25160;25161 19964;19965;19966;19967;19968 19966 4 ALGAQIEK Unmodified 828.47052 0.47051757 2890 Q6IQ49 SDE2 Protein SDE2 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 31 4 3 3 3 2 1 2 3 3 2 2 3 25.706 25.906 2 0.0054586 21598 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 116.54 11.152 685930000 0 0 0 31545000 39407000 69000000 54196000 44252000 8936400 40534000 74497000 90046000 59102000 43466000 130950000 2920 2890 2666 25162;25163;25164;25165;25166;25167;25168;25169;25170;25171;25172;25173;25174;25175;25176;25177;25178;25179;25180;25181;25182;25183;25184;25185;25186;25187;25188;25189;25190;25191;25192 19969;19970;19971;19972;19973;19974;19975;19976;19977;19978;19979;19980;19981;19982;19983;19984;19985;19986;19987;19988;19989;19990;19991;19992;19993;19994;19995;19996 19976 27 ALGDLISATK Unmodified 987.56006 0.56006086 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 64.788 62.816 2 0.00090056 83055 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 113.74 55.024 1317700000 98754000 750990000 33524000 0 0 65722000 0 0 22266000 73738000 45398000 63520000 41442000 42307000 80060000 2921 5187 2667 25193;25194;25195;25196;25197;25198;25199;25200;25201;25202;25203;25204;25205;25206;25207;25208;25209 19997;19998;19999;20000;20001;20002;20003;20004;20005;20006;20007;20008;20009;20010;20011;20012;20013;20014;20015;20016 20005 20 ALGDQILFVNRPDK Unmodified 1584.8624 0.86239089 1242 P29084 GTF2E2 Transcription initiation factor IIE subunit beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.256 74.317 3 0.00037602 85608 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 67.019 53.06 117970000 0 0 0 5323500 4838000 10096000 6854700 9677600 8342100 14017000 8243700 10704000 10591000 6934900 22352000 2922 1242 2668 25210;25211;25212;25213;25214;25215;25216;25217;25218;25219;25220;25221 20017;20018;20019;20020;20021;20022;20023;20024;20025;20026;20027 20017 11 ALGDSSPSQAMQEYIAVVK Unmodified 1992.9826 0.98264196 4103 Q9BR61 ACBD6 Acyl-CoA-binding domain-containing protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 6.25 3.77 1 1 2 2 1 1 87.539 85.581 2 7.6243E-31 106055 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 162.94 141.31 88579000 0 79060000 0 0 0 0 0 0 0 4063600 0 0 0 0 5454900 2923 4103 2669 25222;25223;25224;25225 20028;20029;20030;20031 20029 4 ALGEEALLR Unmodified 970.54475 0.54474515 3609 Q92503 SEC14L1 SEC14-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 2 1 1 1 1 1 1 1 56.832 56.96 2 0.0032444 64963 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 132.57 89.443 506330000 0 0 0 36304000 36225000 36849000 39467000 52948000 26745000 43123000 52775000 60549000 51824000 30150000 39370000 2924 3609 2670 25226;25227;25228;25229;25230;25231;25232;25233;25234;25235;25236;25237;25238 20032;20033;20034;20035;20036;20037;20038;20039;20040;20041;20042;20043;20044 20038 11 ALGEEEEEPPR Unmodified 1254.5728 0.57281039 3752 Q96B54 ZNF428 Zinc finger protein 428 yes yes 0 0 0 By MS/MS 10 0 1 1 28.289 28.977 2 0.00042521 30220 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.744 74.716 6794200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6794200 2925 3752 2671 25239 20045 20045 1 ALGEPITLFGEGPAER Unmodified 1655.8519 0.85188578 303 O43172 PRPF4 U4/U6 small nuclear ribonucleoprotein Prp4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 84.614 84.679 2 2.8816E-24 97732 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 124.12 106.75 212460000 0 0 0 8662400 14297000 18342000 14116000 21213000 13017000 21317000 19267000 22428000 9405100 17245000 33152000 2926 303 2672 25240;25241;25242;25243;25244;25245;25246;25247;25248;25249;25250;25251 20046;20047;20048;20049;20050;20051;20052;20053;20054;20055;20056;20057;20058;20059 20049 14 ALGEPITLFGEGPAERR Unmodified 1811.953 0.95299681 303 O43172 PRPF4 U4/U6 small nuclear ribonucleoprotein Prp4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.433 79.513 3 8.7145E-29 91499 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 113.59 79.889 121710000 0 0 0 3603100 0 12912000 5943500 11274000 9540000 12336000 0 17271000 7608900 10442000 30778000 2927 303 2673 25252;25253;25254;25255;25256;25257;25258;25259;25260;25261;25262 20060;20061;20062;20063;20064;20065;20066;20067;20068;20069;20070;20071 20063 12 ALGFEAAESSLTK Unmodified 1322.6718 0.67179615 3503 Q8TDL5 BPIFB1 BPI fold-containing family B member 1 yes yes 0 0 0 By MS/MS 10 0 1 1 70.224 70.338 2 0.00072561 81199 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 87.298 57.825 4111900 0 0 0 0 0 0 0 0 0 0 0 0 4111900 0 0 2928 3503 2674 25263 20072 20072 1 ALGFMYIR Oxidation (M) 985.50552 0.50552287 2815 Q5VTL8 PRPF38B Pre-mRNA-splicing factor 38B yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 69.401 69.451 2 0.046057 78966 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.474 26.18 55106000 0 0 0 3354100 4083300 4467100 5663800 5003800 5080400 4720600 6733800 0 5723500 4839400 5436800 2929 2815 2675 25264;25265;25266;25267;25268;25269;25270;25271;25272;25273;25274 20073;20074 20073 2 ALGGDVSDQSLESHSQK Unmodified 1756.8228 0.8227705 4968 Q9UKJ3 GPATCH8 G patch domain-containing protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 35.627 35.435 3 0.00089282 38494 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 50.188 39.72 314750000 0 9004500 0 10330000 16881000 17656000 27966000 20428000 23665000 29083000 28890000 34757000 28021000 32817000 35257000 2930 4968 2676 25275;25276;25277;25278;25279;25280;25281;25282;25283;25284;25285;25286;25287 20075;20076;20077;20078;20079;20080;20081;20082;20083;20084;20085 20081 11 ALGGFGFGSR Unmodified 967.48756 0.48756462 96 CON__Q5XKE5;Q5XKE5 KRT79 Keratin, type II cytoskeletal 79 yes no 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 65.043 64.7 2 0.019183 74616 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 47.96 31.486 + 31048000 0 0 0 26425000 2031000 0 0 2591500 0 0 0 0 0 0 0 2931 96 2677 25288;25289;25290 20086 20086 1 ALGGLACDLPGR Unmodified 1198.6128 0.61284149 2285 Q13421 MSLN Mesothelin;Megakaryocyte-potentiating factor;Mesothelin, cleaved form yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.669 65.755 2 8.0202E-05 75018 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 89.047 73.897 67823000 0 0 0 2805700 2696000 5870000 3225700 4514700 4129600 6449400 6180800 11227000 6837700 5791800 8094800 2932 2285 2678 25291;25292;25293;25294;25295;25296;25297;25298;25299;25300;25301;25302 20087;20088;20089;20090;20091;20092;20093;20094;20095;20096;20097;20098;20099 20091 13 ALGGNEVVSLDK Unmodified 1200.635 0.63501672 5378 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.2 2.4 2 18 1 1 2 2 2 2 2 1 2 2 2 1 10.462 10.166 2 0.0014361 8416 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 67.897 19.474 + 3576800000 569370000 1438000000 0 148700000 86086000 155100000 195780000 106920000 61320000 198230000 0 0 202690000 328020000 86563000 2933 5378 2679 25303;25304;25305;25306;25307;25308;25309;25310;25311;25312;25313;25314;25315;25316;25317;25318;25319;25320;25321;25322 20100;20101;20102;20103;20104;20105;20106;20107;20108;20109;20110;20111 20104 11 ALGHPAMLSK Unmodified 1023.5535 0.55353569 3701 Q93008 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 33.577 31.873 2 0.010068 32028 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.659 24.704 73092000 44262000 10078000 0 0 0 0 3232100 0 0 3266100 4215300 0 0 0 8039200 2934 3701 2680 25323;25324;25325;25326;25327;25328 20112;20113 20112 2 ALGHPAMLSK Oxidation (M) 1039.5485 0.54845032 3701 Q93008 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 23.406 19.434 2 0.0071136 27672 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.77 10.388 64635000 59911000 0 4724700 0 0 0 0 0 0 0 0 0 0 0 0 2935 3701 2680 25329;25330 20114 20114 5267 1 ALGHQLGR Unmodified 850.47733 0.47733428 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.932 14.095 2 0.047202 12701 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.916 19.661 48082000 0 0 0 2367800 2599300 3096000 2492400 4055300 1436100 5196000 4493900 4971900 4195000 4257700 8921000 2936 2392 2681 25331;25332;25333;25334;25335;25336;25337;25338;25339;25340;25341;25342 20115;20116 20115 2 ALGIHQTGQK Unmodified 1051.5774 0.57744226 2656 Q2TAL8 QRICH1 Glutamine-rich protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14.686 14.123 2 1.1534E-05 17856 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 134.77 89.684 198200000 81908000 21492000 29575000 3808800 2949200 3662900 4548900 3338500 2592200 6368000 6523400 7462700 6564800 6417600 10989000 2937 2656 2682 25343;25344;25345;25346;25347;25348;25349;25350;25351;25352;25353;25354;25355;25356;25357 20117;20118;20119;20120;20121;20122;20123;20124;20125;20126;20127;20128;20129 20126 12 ALGIPELVNQGQALEPK Unmodified 1775.9781 0.97814893 5292 Q9Y6Q9 NCOA3 Nuclear receptor coactivator 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 85.151 85.293 2 0.00039394 99021 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.49 46.332 42140000 0 0 0 0 0 3576800 0 4604000 4051100 6215700 4793700 6511000 0 3263500 9124300 2938 5292 2683 25358;25359;25360;25361;25362;25363;25364;25365;25366 20130;20131;20132;20133;20134;20135;20136;20137;20138;20139 20139 10 ALGISSDSNK Unmodified 990.49819 0.49818889 566 O75962 TRIO Triple functional domain protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching 9 2.65 1 7 1 1 1 1 1 1 1 1 21.987 21.591 2 0.0093004 26856 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.679 56.976 78366000 0 53657000 0 0 1567000 3511300 2861300 0 2797500 4222800 0 0 0 3675800 6073800 2939 566 2684 25367;25368;25369;25370;25371;25372;25373;25374 20140;20141;20142;20143 20142 4 ALGITEIFIK Unmodified 1103.659 0.65904662 4025 Q99574 SERPINI1 Neuroserpin yes yes 0 0 0 By MS/MS 2 0 1 1 91.176 88.704 2 0.024172 107424 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 61.999 48.224 2492800 0 0 2492800 0 0 0 0 0 0 0 0 0 0 0 0 2940 4025 2685 25375 20144 20144 1 ALGLAHVAIK Unmodified 991.61785 0.61785051 2933 Q6P3X3 TTC27 Tetratricopeptide repeat protein 27 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 52.355 52.736 2 0.0050068 59842 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 70.69 47.799 61638000 0 0 0 0 0 10164000 0 0 0 8819400 7795600 9649700 5637300 0 19572000 2941 2933 2686 25376;25377;25378;25379;25380;25381 20145;20146;20147;20148;20149 20145 5 ALGLDSANEK Unmodified 1016.5138 0.51383895 2294 Q13451 FKBP5 Peptidyl-prolyl cis-trans isomerase FKBP5;Peptidyl-prolyl cis-trans isomerase FKBP5, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.12 3.89 3 1 4 1 2 1 1 1 1 1 33.528 29.818 2 0.0052248 33111 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 69.812 32.084 622270000 20348000 591000000 3575500 0 0 0 0 0 0 0 0 0 7346600 0 0 2942 2294 2687 25382;25383;25384;25385;25386;25387;25388;25389 20150;20151;20152;20153;20154;20155;20156;20157;20158 20158 9 ALGLDSESIR Unmodified 1059.556 0.55603811 4888 Q9UGR2 ZC3H7B Zinc finger CCCH domain-containing protein 7B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 52.522 52.764 2 0.0021994 59277 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 85.666 64.967 353030000 0 0 0 0 29737000 0 40414000 0 7907400 66864000 15842000 112360000 60422000 0 19483000 2943 4888 2688 25390;25391;25392;25393;25394;25395;25396;25397;25398 20159;20160;20161;20162;20163;20164;20165;20166 20163 8 ALGLDTGQQQDAQEFSK Unmodified 1834.8697 0.86972069 3157 Q86UV5 USP48 Ubiquitin carboxyl-terminal hydrolase 48 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.08 3.33 2 1 9 3 1 1 1 1 1 1 1 1 1 59.085 57.847 2;3 2.3406E-41 65595 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 186.17 172.97 270460000 0 204200000 0 0 5189400 6238800 6023900 0 0 5525200 8998100 8328400 6269400 6905500 12787000 2944 3157 2689 25399;25400;25401;25402;25403;25404;25405;25406;25407;25408;25409;25410 20167;20168;20169;20170;20171;20172;20173;20174;20175;20176;20177 20172 11 ALGLNENDYK Unmodified 1135.551 0.55095274 5014 Q9UM54 MYO6 Unconventional myosin-VI yes yes 0 0 0 By MS/MS By MS/MS 5 3.56 1 1 1 2 1 48.473 43.211 2 9.5017E-06 56137 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.22 88.099 59754000 0 59754000 0 0 0 0 0 0 0 0 0 0 0 0 0 2945 5014 2690 25411;25412;25413 20178;20179;20180;20181 20179 4 ALGPEQLLR Unmodified 995.57638 0.57637963 1382 P36915 GNL1 Guanine nucleotide-binding protein-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 68.077 67.938 2 0.005209 78807 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 80.229 44.873 28077000 0 0 0 7266100 5258700 0 6217900 0 0 4420700 0 0 0 4913500 0 2946 1382 2691 25414;25415;25416;25417;25418 20182;20183;20184;20185 20184 4 ALGQNPTNAEVLK Unmodified 1353.7252 0.72522871 1813;1004 P60660;P14649 MYL6;MYL6B Myosin light polypeptide 6;Myosin light chain 6B no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.12 2.42 1 1 15 2 1 1 1 1 1 2 2 1 1 1 1 2 47.234 46.787 2 3.3254E-33 52500 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 169.93 142.63 9544200000 0 196680000 0 565720000 664040000 602720000 803440000 601800000 431750000 764530000 1101200000 1161400000 937580000 623690000 1089700000 2947 1813;1004 2692 25419;25420;25421;25422;25423;25424;25425;25426;25427;25428;25429;25430;25431;25432;25433;25434;25435 20186;20187;20188;20189;20190;20191;20192;20193;20194;20195;20196;20197;20198;20199;20200;20201;20202;20203 20197 17 ALGSAQYEDPR Unmodified 1205.5677 0.56766543 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 31.036 31.35 2 0.0037205 34723 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 100.02 79.317 8383600 0 0 0 0 0 0 0 0 0 0 0 0 0 8383600 0 2948 4139 2693 25436;25437;25438 20204;20205;20206 20206 3 ALGSAQYEDPRNLHSAGR Unmodified 1940.9453 0.94528567 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 2 2 1 1 1 40.524 40.569 3;4 0.00011163 45708 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 40.493 28.292 131800000 0 0 0 6415200 21455000 0 36799000 0 0 20397000 0 30128000 0 16606000 0 2949 4139 2694 25439;25440;25441;25442;25443;25444;25445;25446 20207;20208;20209;20210 20209 2 ALGSEVQDASK Unmodified 1103.5459 0.54586736 4365 Q9H2G2 SLK STE20-like serine/threonine-protein kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 23.914 23.144 2 0.00028318 23033 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 93.111 69.682 568340000 12151000 317430000 0 15161000 8915700 16394000 13298000 12479000 8817700 19763000 25326000 30501000 27842000 21572000 38693000 2950 4365 2695 25447;25448;25449;25450;25451;25452;25453;25454;25455;25456;25457;25458;25459;25460;25461 20211;20212;20213;20214;20215;20216;20217;20218;20219;20220;20221;20222;20223;20224;20225;20226;20227 20222 15 ALGTAADLGTLAPR Unmodified 1325.7303 0.73031409 3753 Q96B70 LENG9 Leukocyte receptor cluster member 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.699 71.735 2 1.2747E-13 82382 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 112.13 88.697 56031000 0 0 0 3816800 4112400 4906200 4884100 4188400 4296900 5371500 7137600 6904500 5522100 4890400 0 2951 3753 2696 25462;25463;25464;25465;25466;25467;25468;25469;25470;25471;25472;25473 20228;20229;20230;20231;20232;20233;20234;20235;20236;20237;20238;20239;20240 20231 13 ALGTERTTLEGHLAK Unmodified 1595.8631 0.86311917 4199 Q9BW19 KIFC1 Kinesin-like protein KIFC1 yes yes 0 0 1 By MS/MS 2 0 1 1 49.283 41.457 3 0.025785 57305 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 34.82 15.053 17562000 17562000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2952 4199 2697 25474 20241 20241 1 ALGTEVIQLFPEK Unmodified 1443.7973 0.79733102 697 O95831 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 86.913 87.07 2 0.016325 100710 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.625 30.29 4265600 0 0 0 0 0 0 0 0 0 1071900 931180 0 0 0 2262500 2953 697 2698 25475;25476;25477 20242 20242 1 ALGTLGMTTNEK Oxidation (M) 1250.6177 0.61765209 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 1 0 By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.64 2.9 1 1 9 2 1 1 1 1 1 1 1 1 1 33.198 32.478 2 0.0010394 39612 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 88.681 54.592 87987000 0 60435000 0 0 1780200 3911300 2963000 1950700 2309100 3708700 3866700 4577200 0 2485100 0 2954 2775 2699 25478;25479;25480;25481;25482;25483;25484;25485;25486;25487;25488 20243;20244;20245;20246;20247;20248;20249;20250 20248 4404 7 ALGTLGMTTNEK Unmodified 1234.6227 0.62273747 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 48.403 47.885 2 8.1603E-05 52721 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 119.21 87.94 241470000 0 159580000 0 6676000 0 10693000 7983200 7077400 0 15093000 0 0 9607100 9267000 15491000 2955 2775 2699 25489;25490;25491;25492;25493;25494;25495;25496;25497 20251;20252;20253;20254;20255;20256;20257;20258;20259;20260;20261;20262 20256 11 ALGTLVSHVTLR Unmodified 1265.7456 0.74557022 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 68.678 68.824 3 0.0051452 77953 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.066 31.553 68563000 0 0 0 0 2038000 9475700 4512100 4877000 4150600 6359800 4466400 9769100 3692300 4813400 14409000 2956 3641 2700 25498;25499;25500;25501;25502;25503;25504;25505;25506;25507;25508 20263;20264;20265;20266;20267;20268 20265 6 ALGTPNNEVWPEVESLQDYK Unmodified 2288.0961 0.096091815 822 P06493 CDK1 Cyclin-dependent kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 2 2 1 2 2 86.227 86.365 2;3 0.0036445 99828 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.309 37.692 52071000 0 0 0 0 0 2027200 0 2379500 0 13413000 8387400 2922200 0 3773600 19169000 2957 822 2701 25509;25510;25511;25512;25513;25514;25515;25516;25517;25518;25519 20269;20270;20271 20271 2 ALGTVNRATEK Unmodified 1158.6357 0.63568542 709 O95997;Q9NZH5;Q9NZH4 PTTG1;PTTG2;PTTG3P Securin;Securin-2;Putative pituitary tumor-transforming gene 3 protein yes no 0 0 1 By MS/MS 2 0 1 1 18.087 13.707 2 0.00032244 19890 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 121.6 81.981 14108000 14108000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2958 709 2702 25520 20272 20272 1 ALGYMERAAESYGK Unmodified 1544.7293 0.72932781 5245 Q9Y5Q9 GTF3C3 General transcription factor 3C polypeptide 3 yes yes 0 0 1 By MS/MS 2 0 1 1 64.154 55.875 2 0.010519 75204 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.65 58.431 8876500 8876500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2959 5245 2703 25521 20273 20273 1 ALHAELVQHFR Unmodified 1319.7099 0.70985342 2706 Q53LP3 SOWAHC Ankyrin repeat domain-containing protein SOWAHC yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 47.378 47.801 3 0.037724 53262 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 23.931 11.3 20307000 0 0 0 0 0 4454700 0 0 2857400 0 0 7689200 0 0 5306100 2960 2706 2704 25522;25523;25524;25525 20274;20275 20275 2 ALHDQSQELQDAAGHR Unmodified 1774.8347 0.83467259 607 O94927 HAUS5 HAUS augmin-like complex subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 29.522 29.612 3 1.6034E-19 32061 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 83.54 62.082 69997000 0 0 0 5480400 3032200 6734700 6603700 5685900 4785600 6734100 9465100 0 12725000 8749700 0 2961 607 2705 25526;25527;25528;25529;25530;25531;25532;25533;25534;25535 20276;20277;20278;20279;20280;20281;20282;20283;20284 20282 9 ALHHGIDLEK Unmodified 1131.6037 0.60365701 1009 P14868 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching 10 0 5 1 1 1 1 1 23.988 24.378 2 0.0070449 24810 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 63.419 19.611 25138000 0 0 0 1960800 0 0 0 0 0 0 2956400 6161900 0 3261400 10798000 2962 1009 2706 25536;25537;25538;25539;25540 20285 20285 1 ALHLVEDLR Unmodified 1064.5978 0.59784335 3180 Q86W92 PPFIBP1 Liprin-beta-1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 57.141 57.164 2 0.008436 65217 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 69.628 11.46 38860000 0 0 0 2851800 0 0 5506100 6383600 8200200 7596100 0 0 8322100 0 0 2963 3180 2707 25541;25542;25543;25544;25545;25546 20286;20287 20287 2 ALHNLAQQAPEFSATQVFPR Unmodified 2224.1389 0.1389001 4152 Q9BTW9 TBCD Tubulin-specific chaperone D yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 79.019 79.143 3 1.5887E-08 91123 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.376 63.088 11618000 0 0 0 0 0 3165400 0 0 0 0 0 0 0 0 8453100 2964 4152 2708 25547;25548 20288 20288 1 ALHQLYYDPNIENK Unmodified 1716.8471 0.84713476 591 O94829 IPO13 Importin-13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 62.323 58.504 3 0.0047893 78806 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.108 45.35 85397000 58218000 0 19674000 0 0 0 0 0 0 0 0 0 0 0 7505400 2965 591 2709 25549;25550;25551 20289;20290;20291 20290 3 ALHQYTLEPSEK Unmodified 1414.7092 0.70924429 4839 Q9UBF2 COPG2 Coatomer subunit gamma-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.16 3.73 5 2 12 2 3 2 1 1 1 1 1 1 1 1 1 1 1 1 38.737 36.979 2;3 9.3379E-15 47249 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 111.63 96.258 548740000 292150000 108950000 54418000 5419600 4193700 10416000 4234200 6024500 4814800 8759400 6164400 9527300 8436800 9715100 15520000 2966 4839 2710 25552;25553;25554;25555;25556;25557;25558;25559;25560;25561;25562;25563;25564;25565;25566;25567;25568;25569;25570 20292;20293;20294;20295;20296;20297;20298;20299;20300;20301;20302;20303 20302 10 ALHQYTLEPSEKPFDMK Oxidation (M) 2048.9877 0.98772734 4839 Q9UBF2 COPG2 Coatomer subunit gamma-2 yes yes 0 1 1 By MS/MS 2 0 1 1 65.43 57.142 4 0.0044205 76784 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.708 37.706 9902300 9902300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2967 4839 2711 25571 20304 20304 6208 0 ALHSDRPPSASQPR Unmodified 1517.7699 0.76988749 166 O00534 VWA5A von Willebrand factor A domain-containing protein 5A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.371 13.527 3 0.0066206 12142 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 30.483 20.157 29348000 0 0 0 1791300 1490800 3123300 1251200 1203700 1556600 2759600 2088700 3519200 2233900 3495600 4833800 2968 166 2712 25572;25573;25574;25575;25576;25577;25578;25579;25580;25581;25582;25583 20305;20306;20307;20308;20309 20306 5 ALHSVLQAVPLNELR Unmodified 1658.9468 0.94678922 2602 Q16401 PSMD5 26S proteasome non-ATPase regulatory subunit 5 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 81.197 81.354 3 0.045335 93754 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 25.609 12.196 19735000 0 0 0 0 0 0 0 0 0 5608100 0 0 0 0 14127000 2969 2602 2713 25584;25585 20310 20310 1 ALHVDSAEYSCLK Unmodified 1491.7028 0.70277871 1173 P24468;P10589 NR2F2;NR2F1 COUP transcription factor 2;COUP transcription factor 1 yes no 0 0 0 By MS/MS 2 0 1 1 53.929 50.032 3 0.016651 62552 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 39.581 31.205 22882000 0 0 22882000 0 0 0 0 0 0 0 0 0 0 0 0 2970 1173 2714 25586 20311 20311 1 ALIAAQYSGAQVR Unmodified 1346.7306 0.73064844 1211 P26641 EEF1G Elongation factor 1-gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.209 55.34 2 5.0844E-09 63664 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 111.65 40.429 936050000 0 0 0 40704000 35295000 71252000 66853000 54158000 30937000 87473000 149890000 121270000 46881000 69064000 162270000 2971 1211 2715 25587;25588;25589;25590;25591;25592;25593;25594;25595;25596;25597;25598 20312;20313;20314;20315;20316;20317;20318;20319;20320;20321;20322;20323 20322 12 ALIAGGGAPEIELALR Unmodified 1549.8828 0.88279198 1642 P50991 CCT4 T-complex protein 1 subunit delta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 86.872 86.94 2 1.6187E-22 100878 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 128.67 111.31 268150000 0 0 0 6108300 14799000 16816000 12398000 11923000 12995000 47536000 34435000 24839000 9240300 21498000 55560000 2972 1642 2716 25599;25600;25601;25602;25603;25604;25605;25606;25607;25608;25609;25610 20324;20325;20326;20327;20328;20329;20330;20331;20332;20333;20334;20335 20325 6 ALIAQLPSPAIDHEQLR Unmodified 1871.0265 0.026496107 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 78.13 78.224 3 0.0032133 89998 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.085 29.985 65619000 0 0 0 0 4620400 9459100 0 6697500 5717500 7321800 5731300 0 0 7717700 18354000 2973 5049 2717 25611;25612;25613;25614;25615;25616;25617;25618 20336;20337;20338 20337 2 ALIASAGADALAK Unmodified 1170.6608 0.66083754 4606 Q9NRL3 STRN4 Striatin-4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 59.05 58.385 2 0.00082052 65339 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.817 49.462 243420000 0 151170000 0 4794700 4209300 5688300 6737900 4407300 4762200 8820600 9404500 13785000 8408700 6694600 14537000 2974 4606 2718 25619;25620;25621;25622;25623;25624;25625;25626;25627;25628;25629;25630;25631;25632 20339;20340;20341;20342;20343;20344;20345;20346;20347;20348;20349;20350;20351;20352;20353 20343 14 ALIDPSSGLPNRLPPGAVPPGAR Unmodified 2251.2437 0.24369953 3614 Q92530 PSMF1 Proteasome inhibitor PI31 subunit yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 79.34 79.429 3 2.339E-05 91271 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.392 38.535 148580000 0 0 0 0 4348200 15952000 0 6442900 0 26185000 12590000 26430000 14004000 14050000 28582000 2975 3614 2719 25633;25634;25635;25636;25637;25638;25639;25640;25641;25642 20354;20355;20356;20357;20358;20359;20360;20361 20356 8 ALIDQEVK Unmodified 914.5073 0.50729701 524 O75608 LYPLA1 Acyl-protein thioesterase 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 36.818 36.96 2 0.017183 40975 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 66.073 24.885 385050000 0 0 0 47884000 15465000 0 32785000 27133000 19895000 53810000 42520000 0 34807000 40230000 70523000 2976 524 2720 25643;25644;25645;25646;25647;25648;25649;25650;25651;25652 20362;20363;20364;20365;20366 20366 5 ALIDSVIPK Unmodified 954.57498 0.57498264 1250 P29466 CASP1 Caspase-1;Caspase-1 subunit p20;Caspase-1 subunit p10 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 74.208 74.412 2 0.021923 85716 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 51.854 14.127 46518000 0 0 0 0 0 0 5729100 3781100 2553800 0 7785800 8801600 4505800 0 13361000 2977 1250 2721 25653;25654;25655;25656;25657;25658;25659 20367;20368;20369;20370;20371;20372;20373 20367 7 ALIDYENSNK Unmodified 1165.5615 0.56151742 5254 Q9Y5X3 SNX5 Sorting nexin-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 40.84 40.061 2 1.1746E-06 50147 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 151.5 123.97 367440000 0 212880000 0 12306000 10724000 14862000 14546000 13141000 8605800 19788000 25282000 0 17672000 17639000 0 2978 5254 2722 25660;25661;25662;25663;25664;25665;25666;25667;25668;25669;25670;25671 20374;20375;20376;20377;20378;20379;20380;20381;20382;20383;20384;20385 20377 12 ALIEFTK Unmodified 820.46945 0.46945494 3696 Q92990 GLMN Glomulin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 6 4 3 3 1 1 1 1 1 1 60.876 58.103 2 0.027727 75525 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.068 56.215 159920000 37499000 77188000 16736000 0 0 0 0 0 0 8876600 0 9208300 0 0 10416000 2979 3696 2723 25672;25673;25674;25675;25676;25677 20386;20387 20387 2 ALIEHEMK Unmodified 969.49535 0.49535211 648 O95372 LYPLA2 Acyl-protein thioesterase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.8 3.92 2 3 1 1 1 1 1 25.21 23.615 2 0.018202 30833 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 120.46 59.658 122400000 60378000 0 44617000 0 0 5261000 0 0 0 5584700 0 0 0 0 6560400 2980 648 2724 25678;25679;25680;25681;25682 20388;20389 20389 1 ALIEHEMK Oxidation (M) 985.49027 0.49026674 648 O95372 LYPLA2 Acyl-protein thioesterase 2 yes yes 0 1 0 By MS/MS 10 0 1 1 11.788 11.783 2 0.050356 10744 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 60.682 25.858 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2981 648 2724 25683 20390 20390 1 ALIEMEK Oxidation (M) 848.43135 0.43135487 2508 Q15233 NONO Non-POU domain-containing octamer-binding protein yes yes 0 1 0 By MS/MS By MS/MS 2.4 0.49 3 2 4 1 23.942 20.911 2 0.025874 26382 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 94.262 7.3957 577820000 0 566110000 11706000 0 0 0 0 0 0 0 0 0 0 0 0 2982 2508 2725 25684;25685;25686;25687;25688 20391;20392;20393 20393 3 ALIEMEK Unmodified 832.43644 0.43644025 2508 Q15233 NONO Non-POU domain-containing octamer-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42.829 41.823 2 0.029674 54059 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.407 8.3208 1337000000 30660000 638120000 18800000 30078000 36590000 50716000 48999000 37740000 26036000 61512000 74393000 74822000 44846000 59683000 103960000 2983 2508 2725 25689;25690;25691;25692;25693;25694;25695;25696;25697;25698;25699;25700;25701;25702;25703 20394;20395 20394 2 ALIETYQK Unmodified 964.52295 0.52294707 3453 Q8NG31 CASC5 Protein CASC5 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 36.723 36.907 2 0.018686 40768 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 64.236 34.012 34380000 0 0 0 2506300 3025000 2668500 0 2663200 0 4135300 3624200 5807900 0 3120400 6829300 2984 3453 2726 25704;25705;25706;25707;25708;25709;25710;25711;25712 20396;20397 20396 2 ALIEVLQPLIAEHQAR Unmodified 1800.0258 0.025767826 1155 P23381 WARS Tryptophan--tRNA ligase, cytoplasmic;T1-TrpRS;T2-TrpRS yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 88.215 88.393 3 0.0044642 102250 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.517 30.111 16568000 0 0 0 0 0 0 0 0 0 0 1622500 0 0 0 14946000 2985 1155 2727 25713;25714 20398 20398 1 ALIGATNPADAPPGTIR Unmodified 1633.8788 0.87876924 2257 Q13232 NME3 Nucleoside diphosphate kinase 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 2 1 2 2 1 1 1 2 65.547 65.578 2;3 2.1237E-41 75106 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 149.23 138.3 145290000 0 0 0 8242300 15358000 8589800 15588000 17884000 9141500 13112000 22584000 34790000 0 0 0 2986 2257 2728 25715;25716;25717;25718;25719;25720;25721;25722;25723;25724;25725;25726;25727 20399;20400;20401;20402;20403;20404;20405;20406;20407;20408;20409;20410 20405 12 ALIGQEGDPDLK Unmodified 1254.6456 0.6455814 2189 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 51.193 51.156 2 0.00039398 57769 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 80.755 65.992 133320000 0 0 0 8858100 12898000 26845000 0 0 0 27803000 18642000 0 38276000 0 0 2987 2189 2729 25728;25729;25730;25731;25732;25733;25734;25735;25736 20411;20412;20413;20414;20415;20416;20417;20418;20419;20420 20412 10 ALILTLAR Unmodified 869.56984 0.56983769 4998 Q9ULK4 MED23 Mediator of RNA polymerase II transcription subunit 23 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 75.213 75.379 2 0.022888 86836 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.788 29.498 28267000 0 0 0 0 0 3481900 2094000 2214600 2996600 3128900 2150000 3984700 0 2352000 5864400 2988 4998 2730 25737;25738;25739;25740;25741;25742;25743;25744;25745 20421;20422;20423;20424 20424 4 ALINADELASDVAGAEALLDRHQEHK Unmodified 2785.3995 0.39948448 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS By MS/MS 2.67 0.471 1 2 2 1 97.017 92.046 5 5.5595E-93 115766 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 144.76 139.71 159160000 152670000 6490300 0 0 0 0 0 0 0 0 0 0 0 0 0 2989 2344 2731 25746;25747;25748 20425;20426;20427 20427 3 ALINADELASDVAGAEALLDRHQEHKGEIDAHEDSFK Unmodified 4013.9355 0.93551543 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 2 By MS/MS 2 0 1 1 97.421 89.291 6 0.00046418 115243 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 28.327 26.763 19828000 19828000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2990 2344 2732 25749 20428 20428 1 ALINLVQGK Unmodified 954.58622 0.58621603 3389 Q8NB91 FANCB Fanconi anemia group B protein yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 74.577 68.538 2 0.012217 89781 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.244 49.419 7429100 6199500 1229700 0 0 0 0 0 0 0 0 0 0 0 0 0 2991 3389 2733 25750;25751 20429;20430 20430 2 ALINMSSLPAQDK Unmodified 1386.7177 0.71770049 2699 Q53F19 C17orf85 Uncharacterized protein C17orf85 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.065 71.139 2 2.0712E-07 81824 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 97.456 68.295 66527000 0 0 0 3289200 3659700 4931800 4553000 4039800 3923800 4153600 7070000 8708000 5920600 5765700 10511000 2992 2699 2734 25752;25753;25754;25755;25756;25757;25758;25759;25760;25761;25762;25763 20431;20432;20433;20434;20435;20436;20437;20438;20439;20440;20441;20442 20432 12 ALIPLALEGTDVGQTK Unmodified 1624.9036 0.903587 4387 Q9H3U1 UNC45A Protein unc-45 homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 1 2 2 2 2 2 2 2 2 2 2 85.143 85.223 2;3 2.8127E-27 98367 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 127.17 120.37 342890000 0 0 0 13555000 13641000 37243000 23726000 21922000 19146000 36331000 33416000 34417000 25619000 27648000 56225000 2993 4387 2735 25764;25765;25766;25767;25768;25769;25770;25771;25772;25773;25774;25775;25776;25777;25778;25779;25780;25781;25782;25783;25784;25785;25786 20443;20444;20445;20446;20447;20448;20449;20450;20451;20452;20453;20454;20455;20456;20457;20458;20459;20460;20461;20462;20463;20464;20465;20466;20467 20450 24 ALIPVSQK Unmodified 854.52255 0.52255314 4769 Q9NZJ0 DTL Denticleless protein homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.47 42.647 2 0.016586 46098 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.032 44.54 265300000 0 0 0 20731000 19084000 22310000 21004000 18948000 17607000 22978000 30340000 26366000 20558000 16567000 28812000 2994 4769 2736 25787;25788;25789;25790;25791;25792;25793;25794;25795;25796;25797;25798 20468;20469;20470 20469 2 ALIQVLELDVADIK Unmodified 1538.892 0.89195969 299 O43156 TTI1 TELO2-interacting protein 1 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 99.868 91.738 2 7.9312E-06 118240 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 102.4 87.721 13843000 13843000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2995 299 2737 25799 20471 20471 1 ALIQYFSPYVSADMHR Oxidation (M) 1912.9142 0.91416847 2232 Q13098 GPS1 COP9 signalosome complex subunit 1 yes yes 0 1 0 By MS/MS By matching By matching By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 81.736 81.87 3 0.00037169 94435 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.606 47.505 25612000 0 0 0 0 0 3072900 0 0 1672700 2785500 3288800 0 0 1516400 13276000 2996 2232 2738 25800;25801;25802;25803;25804;25805 20472 20472 3626 1 ALIVEPSRELAEQTLNNIK Unmodified 2137.1743 0.17428256 3608 Q92499 DDX1 ATP-dependent RNA helicase DDX1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.2 3.92 3 2 1 1 1 1 1 84.953 81.93 3 7.8503E-65 103939 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 143.39 135.03 146570000 65798000 61061000 4373800 0 0 0 0 2591500 0 12750000 0 0 0 0 0 2997 3608 2739 25806;25807;25808;25809;25810 20473;20474;20475;20476;20477;20478 20477 6 ALIVVPYAEGVIPDEAK Unmodified 1782.9768 0.97675195 2115 Q05519 SRSF11 Serine/arginine-rich splicing factor 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 2 2 2 2 1 2 1 88.748 88.815 2;3 9.1594E-10 102759 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 101.53 97.192 680910000 0 0 0 6922700 40755000 33549000 30353000 49361000 42536000 105690000 95445000 79619000 21401000 71057000 104220000 2998 2115 2740 25811;25812;25813;25814;25815;25816;25817;25818;25819;25820;25821;25822;25823;25824;25825;25826;25827;25828;25829;25830;25831;25832 20479;20480;20481;20482;20483;20484;20485;20486;20487;20488;20489;20490;20491;20492;20493;20494 20484 16 ALIVVQQGMTPSAK Oxidation (M) 1457.7912 0.79119978 1087 P19388 POLR2E DNA-directed RNA polymerases I, II, and III subunit RPABC1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.613 52.756 2 9.2933E-12 59460 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 99.568 83.37 132900000 0 0 0 5880800 5710600 11113000 7341700 4335700 7029400 11733000 15942000 22345000 13706000 9124000 18637000 2999 1087 2741 25833;25834;25835;25836;25837;25838;25839;25840;25841;25842;25843;25844 20495;20496;20497;20498;20499;20500;20501;20502;20503;20504;20505;20506;20507;20508 20497 1561 14 ALIVVQQGMTPSAK Unmodified 1441.7963 0.79628516 1087 P19388 POLR2E DNA-directed RNA polymerases I, II, and III subunit RPABC1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.025 65.112 2 3.0864E-08 74354 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 114.83 104.88 100650000 0 0 0 4709900 3877000 7733900 4397200 6183600 4525400 8102300 12419000 15971000 6611900 7980900 18138000 3000 1087 2741 25845;25846;25847;25848;25849;25850;25851;25852;25853;25854;25855;25856 20509;20510;20511;20512;20513;20514;20515;20516;20517;20518;20519;20520;20521 20519 12 ALKPANMLER Unmodified 1141.6278 0.62776327 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 41.096 41.417 3 0.0035938 45993 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 53.798 41.182 354440000 0 0 0 0 0 0 28225000 31598000 0 46467000 79755000 168390000 0 0 0 3001 4226 2742 25857;25858;25859;25860;25861 20522;20523;20524;20525;20526 20522 4 ALKPANMLER Oxidation (M) 1157.6227 0.62267789 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 1 1 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 13 1 2 2 2 2 2 2 22.992 23.219 3 0.0084633 23073 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 44.847 20.817 537090000 0 0 0 0 823110 0 33504000 29847000 9589900 67979000 96327000 299020000 0 0 0 3002 4226 2742 25862;25863;25864;25865;25866;25867;25868;25869;25870;25871;25872;25873;25874 20527;20528;20529 20528 5696 2 ALKPEVDK Unmodified 898.51238 0.51238239 1340 P35221 CTNNA1 Catenin alpha-1 yes yes 0 0 1 By MS/MS By MS/MS 3 0 2 1 1 17.829 13.928 2 0.036798 17485 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 126.52 54.384 45899000 158050 45741000 0 0 0 0 0 0 0 0 0 0 0 0 0 3003 1340 2743 25875;25876 20530 20530 0 ALKPPPIK Unmodified 862.56402 0.56402403 973 P12956 XRCC6 X-ray repair cross-complementing protein 6 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 40.997 35.13 2 0.025629 48135 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 120.65 52.612 118300000 87951000 30350000 0 0 0 0 0 0 0 0 0 0 0 0 0 3004 973 2744 25877;25878 20531 20531 0 ALKSESAASSTGKEDK Unmodified 1607.8002 0.80024414 2548 Q15554 TERF2 Telomeric repeat-binding factor 2 yes yes 0 0 2 By MS/MS 10 0 1 1 9.9752 10.217 4 0.046954 7800 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 22.214 0 902500 0 0 0 0 0 0 0 0 0 0 0 0 0 902500 0 3005 2548 2745 25879 20532 20532 0 ALLAEHLLK Acetyl (Protein N-term) 1048.6281 0.62808085 4764 Q9NZD2 GLTP Glycolipid transfer protein yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.71 3.81 4 2 8 3 2 1 1 1 1 1 1 1 1 1 91.325 89.22 2 0.00011894 113679 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 130.27 93.876 376550000 260720000 70542000 15723000 0 1615600 0 2005100 0 2529700 4483800 3875700 3972100 1373800 0 9715200 3006 4764 2746 25880;25881;25882;25883;25884;25885;25886;25887;25888;25889;25890;25891;25892;25893 20533;20534;20535;20536;20537;20538;20539;20540;20541;20542;20543;20544 20539 11 ALLALPIRPATR Unmodified 1290.8136 0.81359021 33 A6ZKI3 FAM127A Protein FAM127A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.688 76.748 3 5.0814E-05 87950 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.695 73.382 197690000 0 0 0 8042800 4204100 23529000 12310000 16012000 19088000 12409000 9965000 28397000 15883000 11418000 36431000 3007 33 2747 25894;25895;25896;25897;25898;25899;25900;25901;25902;25903;25904;25905 20545;20546;20547;20548;20549;20550;20551;20552;20553;20554;20555;20556 20548 12 ALLAMYTNQAEQCRK Oxidation (M) 1811.8658 0.86583806 578 O76094 SRP72 Signal recognition particle subunit SRP72 yes yes 0 1 1 By MS/MS By MS/MS 10 0 2 1 1 47.731 47.838 3 5.7023E-15 53807 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 101.3 90.033 14593000 0 0 0 0 0 7799100 0 0 6793900 0 0 0 0 0 0 3008 578 2748 25906;25907 20557;20558;20559 20558 733 3 ALLAMYTNQAEQCRK Unmodified 1795.8709 0.87092344 578 O76094 SRP72 Signal recognition particle subunit SRP72 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 56.175 56.361 3 0.0004384 64433 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 54.95 50.771 51697000 0 0 0 0 2396100 5405900 0 5839200 4551300 5950900 0 9023100 6762700 4342800 7424800 3009 578 2748 25908;25909;25910;25911;25912;25913;25914;25915;25916 20560;20561;20562 20561 3 ALLANALTSALR Unmodified 1212.719 0.71902112 1793 P57088 TMEM33 Transmembrane protein 33 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 2 1 1 84.465 84.605 2 0.0011685 98186 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 70.1 32.373 17376000 0 0 0 0 0 0 0 0 0 5061500 0 5420700 0 0 6894100 3010 1793 2749 25917;25918;25919;25920;25921;25922;25923 20563;20564;20565;20566;20567;20568 20568 6 ALLAPLVAPEAGEAEPGSQER Unmodified 2104.08 0.08004782 4321 Q9H0B6 KLC2 Kinesin light chain 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 81.088 81.148 2;3 5.2462E-15 93834 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 97.69 92.206 536360000 0 0 0 27643000 41771000 46564000 33961000 38826000 35618000 51203000 59740000 56723000 44282000 32605000 67420000 3011 4321 2750 25924;25925;25926;25927;25928;25929;25930;25931;25932;25933;25934;25935;25936;25937;25938;25939;25940;25941;25942;25943;25944;25945;25946;25947 20569;20570;20571;20572;20573;20574;20575;20576;20577;20578;20579;20580;20581;20582;20583;20584;20585;20586;20587;20588;20589;20590 20589 15 ALLDASETTSTR Unmodified 1263.6307 0.63065962 2401 Q14258 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes yes 0 0 0 By MS/MS 10 0 1 1 39.397 39.86 2 0.0025099 44116 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 74.162 58.281 3918200 0 0 0 0 0 0 0 0 0 0 3918200 0 0 0 0 3012 2401 2751 25948 20591 20591 1 ALLDASETTSTRK Unmodified 1391.7256 0.72562264 2401 Q14258 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.3 3.2 4 2 21 4 2 1 2 2 2 1 2 2 2 2 1 2 2 31.709 30.93 2;3 3.7485E-18 40625 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.56 119.83 756580000 0 130870000 229400000 15980000 21672000 37421000 27972000 21571000 29813000 36193000 34821000 44769000 20906000 28842000 76342000 3013 2401 2752 25949;25950;25951;25952;25953;25954;25955;25956;25957;25958;25959;25960;25961;25962;25963;25964;25965;25966;25967;25968;25969;25970;25971;25972;25973;25974;25975 20592;20593;20594;20595;20596;20597;20598;20599;20600;20601;20602;20603;20604;20605;20606;20607;20608;20609;20610;20611;20612;20613;20614;20615;20616;20617 20595 23 ALLDNTK Unmodified 773.42832 0.42831841 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 21.189 20.792 2 0.0085601 26210 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 154.11 24.153 556910000 0 325960000 5823500 15177000 15225000 22141000 9288800 14214000 15228000 27232000 24579000 26606000 25709000 29729000 0 3014 3641 2753 25976;25977;25978;25979;25980;25981;25982;25983;25984;25985;25986;25987;25988 20618;20619;20620;20621 20618 3 ALLDQLMGTAR Oxidation (M) 1203.6282 0.6281572 4557 Q9NQ29 LUC7L Putative RNA-binding protein Luc7-like 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 66.057 66.204 2 0.0047501 76022 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 54.608 35.629 74157000 0 0 0 0 8417700 0 0 7343100 8712500 0 14117000 0 13821000 9423800 12322000 3015 4557 2754 25989;25990;25991;25992;25993;25994;25995 20622;20623;20624;20625;20626;20627;20628 20626 5969 7 ALLDQLMGTAR Unmodified 1187.6332 0.63324258 4557 Q9NQ29 LUC7L Putative RNA-binding protein Luc7-like 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 82.781 82.831 2 0.0075484 95895 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 53.756 29.602 47194000 0 0 0 1360300 1878500 4503900 2558200 4319200 2998000 5391400 4896700 4733300 6152100 8402700 0 3016 4557 2754 25996;25997;25998;25999;26000;26001;26002;26003;26004;26005;26006 20629 20629 1 ALLDSAAPGTLDLEAR Unmodified 1611.8468 0.84680041 1112 P20749 BCL3 B-cell lymphoma 3 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.754 79.813 2 1.5952E-28 91884 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 139.46 113.53 144880000 0 0 0 6287600 6557100 7662000 10441000 10760000 8670500 14390000 14081000 16378000 13574000 13340000 22738000 3017 1112 2755 26007;26008;26009;26010;26011;26012;26013;26014;26015;26016;26017;26018 20630;20631;20632;20633;20634;20635;20636;20637;20638;20639;20640;20641;20642 20634 13 ALLDSSENCDR Unmodified 1278.551 0.55102909 2810 Q5VT52 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 28.846 29.032 2 0.00027892 31319 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 92.838 63.689 120410000 0 0 0 7769300 12941000 0 13791000 7219800 9890300 13374000 0 15741000 10191000 12138000 17358000 3018 2810 2756 26019;26020;26021;26022;26023;26024;26025;26026;26027;26028;26029 20643;20644;20645;20646;20647;20648;20649;20650;20651;20652;20653;20654 20645 12 ALLDYGVTADAR Unmodified 1263.6459 0.64591575 2042 Q00653 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.418 65.575 2 2.3619E-05 74159 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 91.584 72.839 54880000 0 0 0 0 2722000 4020600 3659100 4778500 0 5789400 6561900 8608500 4236300 5431800 9072300 3019 2042 2757 26030;26031;26032;26033;26034;26035;26036;26037;26038;26039;26040;26041 20655;20656;20657;20658;20659;20660;20661;20662;20663;20664;20665;20666;20667;20668 20664 14 ALLEAGALPNAPNSYGR Unmodified 1712.8846 0.8845829 1467 P42771 CDKN2A Cyclin-dependent kinase inhibitor 2A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.146 74.207 2 9.6224E-25 85583 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 128.67 102.63 273760000 0 0 0 9517500 10072000 14224000 12514000 9513700 7151400 21016000 36316000 34983000 12136000 22075000 84237000 3020 1467 2758 26042;26043;26044;26045;26046;26047;26048;26049;26050;26051;26052;26053 20669;20670;20671;20672;20673;20674;20675;20676;20677;20678;20679;20680;20681 20681 13 ALLEEAFDNLK Unmodified 1261.6554 0.65541781 1996 P82094 TMF1 TATA element modulatory factor yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 89.324 82.822 2 0.00085684 104847 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.309 31.727 17526000 2735300 14790000 0 0 0 0 0 0 0 0 0 0 0 0 0 3021 1996 2759 26054;26055 20682;20683 20682 2 ALLEEFPDK Unmodified 1060.5441 0.54407645 3160 Q86V40 TRABD2A Metalloprotease TIKI1 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 64.66 64.741 2 0.015842 73180 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 57.047 43.051 45978000 0 0 0 2891800 3443400 4324500 4534000 0 2475800 4205100 4894400 5833700 4779000 3395900 5200100 3022 3160 2760 26056;26057;26058;26059;26060;26061;26062;26063;26064;26065;26066 20684 20684 1 ALLEEVK Unmodified 800.46437 0.46436956 3813 Q96EK5 KIAA1279 KIF1-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42.703 41.698 2 0.026498 45034 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.616 28.496 269520000 5740000 93144000 4802100 8255900 7399600 18165000 10981000 10125000 7587300 16046000 17025000 13729000 13447000 13455000 29617000 3023 3813 2761 26067;26068;26069;26070;26071;26072;26073;26074;26075;26076;26077;26078;26079;26080;26081 20685;20686;20687;20688;20689 20687 5 ALLELQQTTVK Unmodified 1242.7184 0.71835242 3105 Q7Z589 EMSY Protein EMSY yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 65.073 65.233 2 0.0068717 74478 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.461 30.324 36021000 0 0 0 0 2016300 2778000 0 3352200 2726000 4396100 3220700 4838900 4058800 3332100 5302000 3024 3105 2762 26082;26083;26084;26085;26086;26087;26088;26089;26090;26091;26092 20690;20691;20692;20693;20694;20695;20696;20697 20697 8 ALLEMAEEK Oxidation (M) 1048.5111 0.51106176 1409 P40222 TXLNA Alpha-taxilin yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 6.55 3.8 3 2 6 1 3 1 1 1 1 1 1 1 36.6 34.454 2 0.0022925 42592 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 117.04 51.784 138990000 5705100 99765000 2572700 1665600 1599100 0 0 0 0 4310900 9414700 0 0 4797900 9156700 3025 1409 2763 26093;26094;26095;26096;26097;26098;26099;26100;26101;26102;26103 20698;20699;20700;20701;20702 20701 2206 5 ALLEMAEEK Unmodified 1032.5161 0.51614714 1409 P40222 TXLNA Alpha-taxilin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.12 3.89 3 1 4 1 2 1 1 1 1 1 57.999 53.58 2 0.0035031 59163 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 103.56 70.723 466340000 13551000 413810000 3701000 0 0 0 0 0 0 0 0 0 0 0 35283000 3026 1409 2763 26104;26105;26106;26107;26108;26109;26110;26111 20703;20704;20705;20706;20707;20708;20709;20710 20703 8 ALLEMTEEVDYDVDSYATQLEAILEQK Unmodified 3115.4795 0.47949344 116 O00139 KIF2A Kinesin-like protein KIF2A yes yes 0 0 0 By MS/MS 2 0 1 1 103.76 95.629 3 3.1734E-40 122900 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 106.12 99.688 12891000 12891000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3027 116 2764 26112 20711 20711 1 ALLEPELRPEDR Unmodified 1436.7623 0.7623425 915 P0DPD7;P0DPD8 yes no 0 0 1 By matching By matching By MS/MS 10 0 3 1 1 1 57.434 57.745 3 0.0020023 64791 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.57 42.627 37949000 0 0 0 0 0 0 6720700 0 0 0 0 0 9096300 0 22132000 3028 915 2765 26113;26114;26115 20712 20712 1 ALLEPTNTPFK Unmodified 1229.6656 0.66558856 5186 Q9Y485 DMXL1 DmX-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 74.922 71.067 2 0.00090395 88861 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.598 50.999 35502000 0 29368000 6133500 0 0 0 0 0 0 0 0 0 0 0 0 3029 5186 2766 26116;26117;26118 20713;20714 20713 2 ALLEREAEEAR Unmodified 1285.6626 0.66262845 3693 Q92974 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 31.838 32.166 3 0.04568 35211 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 43.544 34.945 53927000 0 0 0 3992300 0 0 0 0 7465600 0 12846000 10614000 8173300 4966500 5868100 3030 3693 2767 26119;26120;26121;26122;26123;26124;26125 20715 20715 0 ALLEREAEEARR Unmodified 1441.7637 0.76373948 3693 Q92974 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.661 29.853 3 2.4504E-05 30652 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 104.24 67.263 288890000 0 0 0 12592000 5600500 12167000 16925000 17960000 22809000 11164000 18363000 53429000 28727000 19806000 69351000 3031 3693 2768 26126;26127;26128;26129;26130;26131;26132;26133;26134;26135;26136;26137 20716;20717;20718 20716 2 ALLEVLGR Unmodified 869.53345 0.53345218 2635 Q16775 HAGH Hydroxyacylglutathione hydrolase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 73.627 73.691 2 0.0092148 84992 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 83.614 41.14 48843000 0 0 0 0 4921900 5858800 5796500 8438000 6874500 6932500 10021000 0 0 0 0 3032 2635 2769 26138;26139;26140;26141;26142;26143;26144 20719;20720;20721;20722 20719 4 ALLEVNK Unmodified 785.4647 0.46470391 2285 Q13421 MSLN Mesothelin;Megakaryocyte-potentiating factor;Mesothelin, cleaved form yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 36.622 36.793 2 0.023354 40471 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 89.673 30.033 113890000 0 0 0 7203500 8525800 12326000 11283000 9437400 0 12082000 11582000 18293000 0 11536000 11624000 3033 2285 2770 26145;26146;26147;26148;26149;26150;26151;26152;26153;26154 20723;20724;20725;20726;20727;20728;20729;20730;20731;20732 20724 10 ALLEVVQSGGK Unmodified 1099.6237 0.62372375 219 O14818;Q8TAA3 PSMA7;PSMA8 Proteasome subunit alpha type-7;Proteasome subunit alpha type-7-like yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.29 3.65 3 2 9 2 2 1 1 1 1 1 1 1 2 1 59.962 57.855 2 3.6796E-09 72131 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 135.79 108.27 3997500000 241400000 3225200000 96271000 46057000 20270000 0 20301000 18944000 0 0 77586000 0 21897000 52829000 176740000 3034 219 2771 26155;26156;26157;26158;26159;26160;26161;26162;26163;26164;26165;26166;26167;26168 20733;20734;20735;20736;20737;20738;20739;20740;20741;20742;20743;20744;20745;20746;20747;20748;20749;20750;20751;20752;20753;20754;20755;20756 20749 21 ALLFIPR Unmodified 828.52216 0.52215921 862 P08238 HSP90AB1 Heat shock protein HSP 90-beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.01 79.069 2 0.023373 90331 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 88.627 16.632 1922900000 0 0 0 66762000 58279000 125490000 101000000 155100000 50084000 184010000 229450000 182760000 129250000 147750000 493010000 3035 862 2772 26169;26170;26171;26172;26173;26174;26175;26176;26177;26178;26179;26180 20757;20758;20759;20760;20761;20762;20763;20764;20765;20766;20767 20764 11 ALLFVPR Unmodified 814.50651 0.50650915 850 P07900 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.799 73.865 2 0.023328 84890 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 91.093 0 1015500000 0 0 0 36954000 36075000 68428000 56654000 71863000 20505000 97017000 134320000 107270000 70377000 79124000 236880000 3036 850 2773 26181;26182;26183;26184;26185;26186;26187;26188;26189;26190;26191;26192 20768;20769;20770;20771;20772;20773;20774;20775;20776;20777;20778 20768 11 ALLGFSSDVTDREDDK Unmodified 1766.8323 0.83227255 371 O43815 STRN Striatin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 66.349 66.428 3 0.00024431 75233 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.225 58.497 65031000 0 0 0 2972800 3246100 6643100 4355200 4071900 2957300 5801000 7040500 7612500 0 5443600 14887000 3037 371 2774 26193;26194;26195;26196;26197;26198;26199;26200;26201;26202;26203 20779;20780;20781;20782;20783;20784;20785;20786;20787;20788;20789 20781 10 ALLGGNVR Unmodified 798.47119 0.47118627 403 O60488 ACSL4 Long-chain-fatty-acid--CoA ligase 4 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 34.156 34.344 2 0.018028 37384 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 64.776 16.535 272110000 0 0 0 12225000 14865000 19862000 18994000 24098000 0 28302000 32485000 37607000 25179000 18514000 39978000 3038 403 2775 26204;26205;26206;26207;26208;26209;26210;26211;26212;26213;26214 20790 20790 1 ALLGPALK Unmodified 781.50617 0.5061748 1348 P35250 RFC2 Replication factor C subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 53.774 53.915 2 0.017995 60050 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 64.803 23.883 277880000 0 0 0 17432000 16532000 24805000 0 19710000 0 22408000 36456000 48532000 35777000 27204000 29027000 3039 1348 2776 26215;26216;26217;26218;26219;26220;26221;26222;26223;26224 20791;20792;20793;20794;20795;20796;20797;20798;20799 20795 9 ALLGYADNQCK Unmodified 1251.5918 0.59177169 4506 Q9HC38 GLOD4 Glyoxalase domain-containing protein 4 yes yes 0 0 0 By MS/MS 10 0 1 1 43.303 44.046 2 2.0063E-05 48294 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 131.06 108.82 16290000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16290000 3040 4506 2777 26225 20800 20800 1 ALLHQLESLAK Unmodified 1221.7081 0.70812208 261 O15164 TRIM24 Transcription intermediary factor 1-alpha yes yes 0 0 0 By MS/MS 2 0 1 1 81.808 73.677 3 0.03229 96581 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 30.205 26.32 7253100 7253100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3041 261 2778 26226 20801 20801 1 ALLLELK Unmodified 798.52149 0.52149051 1574 P49427 CDC34 Ubiquitin-conjugating enzyme E2 R1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.023 75.087 2 0.030787 85793 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.415 9.6119 91329000 0 0 0 4743800 4302100 7752900 5999200 4695700 5133400 10075000 10041000 9284500 8292000 6624300 14385000 3042 1574 2779 26227;26228;26229;26230;26231;26232;26233;26234;26235;26236;26237;26238 20802 20802 1 ALLLLCGEDD Unmodified 1117.5325 0.53252548 873 P08758 ANXA5 Annexin A5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.75 4 2 5 1 12 4 3 1 1 1 1 1 1 1 1 1 1 1 1 1 86.16 85.925 1;2 3.8278E-05 91626 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 175.75 154.23 1915100000 453780000 1262600000 287990 4273800 2689900 5332000 7166500 5821600 3083400 8467300 31667000 24503000 6797700 20898000 77720000 3043 873 2780 26239;26240;26241;26242;26243;26244;26245;26246;26247;26248;26249;26250;26251;26252;26253;26254;26255;26256;26257;26258 20803;20804;20805;20806;20807;20808;20809;20810;20811;20812;20813;20814;20815;20816;20817 20813 12 ALLLSTYIK Unmodified 1020.6219 0.62193284 689;613 O94973;O95782 AP2A2;AP2A1 AP-2 complex subunit alpha-2;AP-2 complex subunit alpha-1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.464 80.525 2 0.0074164 93072 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 72.485 53.754 71118000 0 0 0 1979600 2700900 5609100 3272000 5226300 3595200 8927200 6050100 9036500 3963900 5497300 15259000 3044 613;689 2781 26259;26260;26261;26262;26263;26264;26265;26266;26267;26268;26269;26270 20818;20819;20820;20821;20822;20823;20824;20825;20826;20827;20828;20829 20819 12 ALLNLPGTQTSGEAK Unmodified 1498.7991 0.79912193 3857 Q96GM8 TOE1 Target of EGR1 protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 69.326 69.406 2 0.0021939 79699 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 48.561 40.915 33199000 0 0 0 1602900 1625800 0 1767400 1163600 0 2496700 4034400 7922900 3570200 3706500 5308500 3045 3857 2782 26271;26272;26273;26274;26275;26276;26277;26278;26279;26280 20830;20831;20832;20833;20834;20835 20832 6 ALLNQLR Unmodified 826.50249 0.5024864 3787 Q96CW5 TUBGCP3 Gamma-tubulin complex component 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 48.836 48.974 2 0.023331 54537 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 90.939 30.535 74948000 0 0 0 4101200 6504600 0 7829700 8516100 0 0 0 14996000 8745100 8372800 15882000 3046 3787 2783 26281;26282;26283;26284;26285;26286;26287;26288 20836;20837;20838 20838 3 ALLPGPPLQPPPPAPVLLYDQGGGR Unmodified 2519.39 0.39002941 4072 Q99956 DUSP9 Dual specificity protein phosphatase 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 95.251 95.404 3 2.1409E-06 110891 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 43.888 41.239 7298700 0 0 0 0 0 0 0 0 0 3116300 1385200 0 0 0 2797200 3047 4072 2784 26289;26290;26291 20839;20840;20841 20840 3 ALLPLELQDDGSDSRK Unmodified 1755.9003 0.90029254 2592 Q15906 VPS72 Vacuolar protein sorting-associated protein 72 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76.24 75.256 3 3.496E-20 86308 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 109.79 98.849 244780000 14809000 29299000 3933700 6645700 8868600 14282000 11827000 14095000 14685000 17610000 18365000 24941000 13590000 13153000 38673000 3048 2592 2785 26292;26293;26294;26295;26296;26297;26298;26299;26300;26301;26302;26303;26304;26305;26306 20842;20843;20844;20845;20846;20847;20848;20849;20850;20851;20852;20853;20854;20855;20856;20857;20858 20847 17 ALLQEFDNAVLSK Unmodified 1446.7718 0.77184455 2072 Q02241 KIF23 Kinesin-like protein KIF23 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.08 3.33 2 1 9 2 1 1 1 1 1 1 1 1 1 1 85.828 84.963 2 6.9507E-08 97860 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 99.283 67.861 152660000 0 85621000 3211900 0 0 4704000 0 0 4856200 11316000 8519600 10187000 4114100 5085900 15044000 3049 2072 2786 26307;26308;26309;26310;26311;26312;26313;26314;26315;26316;26317;26318 20859;20860;20861;20862;20863;20864;20865;20866;20867;20868;20869;20870;20871;20872 20864 14 ALLQEQFR Unmodified 1003.5451 0.5450795 4653 Q9NUQ8 ABCF3 ATP-binding cassette sub-family F member 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 53.219 53.36 2 0.0051736 60952 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 134.66 69.906 450110000 0 0 0 29356000 37225000 38049000 31191000 28456000 28331000 35155000 39327000 48247000 42573000 33333000 58865000 3050 4653 2787 26319;26320;26321;26322;26323;26324;26325;26326;26327;26328;26329;26330 20873;20874;20875;20876;20877;20878;20879;20880;20881;20882;20883;20884;20885;20886 20875 14 ALLQEQFRR Unmodified 1159.6462 0.64619053 4653 Q9NUQ8 ABCF3 ATP-binding cassette sub-family F member 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching 10 0 5 2 1 1 1 43.412 43.526 2;3 0.021207 49037 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 56.432 43.312 219290000 0 0 0 0 0 89898000 0 62666000 7490000 59232000 0 0 0 0 0 3051 4653 2788 26331;26332;26333;26334;26335 20887;20888;20889 20888 2 ALLQMAEEK Unmodified 1031.5321 0.53213155 4652 Q9NUQ3 TXLNG Gamma-taxilin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.56 3.86 3 1 5 3 1 1 1 1 1 1 54.427 52.226 2 0.006757 67819 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.56 68.07 294140000 0 254100000 6451700 0 3911500 4389700 0 0 3190500 0 0 0 0 5952800 16142000 3052 4652 2789 26336;26337;26338;26339;26340;26341;26342;26343;26344 20890;20891;20892;20893;20894;20895;20896;20897 20891 8 ALLQMAEEK Oxidation (M) 1047.527 0.52704617 4652 Q9NUQ3 TXLNG Gamma-taxilin yes yes 0 1 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS 7.86 3.4 1 1 5 2 1 1 1 1 1 34.364 32.993 2 0.0063919 43258 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.162 58.99 73901000 0 57973000 0 3575900 3266600 0 0 3191900 0 0 0 0 4142400 1751600 0 3053 4652 2789 26345;26346;26347;26348;26349;26350;26351 20898;20899;20900;20901 20899 6061 4 ALLQQQPEDDSK Unmodified 1370.6678 0.66777341 4895 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 31.428 30.936 2 3.7653E-43 33572 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 180.67 166.38 1162800000 0 39322000 0 68153000 60130000 98774000 71398000 79809000 68992000 91836000 129600000 137590000 110830000 78023000 128340000 3054 4895 2790 26352;26353;26354;26355;26356;26357;26358;26359;26360;26361;26362;26363;26364;26365 20902;20903;20904;20905;20906;20907;20908;20909;20910;20911;20912;20913;20914;20915;20916;20917 20915 14 ALLQQQPEDDSKR Unmodified 1526.7689 0.76888444 4895 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 25.943 26.042 3 0.012806 27460 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 32.068 20.797 53738000 0 0 0 4585200 3603500 3734300 5167900 0 4033100 8530200 10727000 0 8790000 4567700 0 3055 4895 2791 26366;26367;26368;26369;26370;26371;26372;26373;26374 20918;20919;20920;20921 20919 4 ALLQSSASR Unmodified 931.50869 0.50869399 5067 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 21.946 22.152 2 0.0048871 22528 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 85.38 40.045 140700000 0 0 0 5871800 895260 5717600 0 5818000 0 8242000 26275000 24710000 0 0 63170000 3056 5067 2792 26375;26376;26377;26378;26379;26380;26381;26382 20922;20923;20924;20925;20926;20927 20926 6 ALLQSSASRK Unmodified 1059.6037 0.60365701 5067 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 14.174 13.941 2 0.012372 12342 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.601 60.434 184010000 70503000 0 0 2786900 1732900 2386500 2871800 0 2252700 3289900 16040000 13558000 4949800 10758000 52883000 3057 5067 2793 26383;26384;26385;26386;26387;26388;26389;26390;26391;26392;26393;26394 20928;20929;20930;20931;20932;20933;20934;20935 20930 8 ALLQTHPEAQR Unmodified 1262.6731 0.67313356 3781 Q96CP2 FLYWCH2 FLYWCH family member 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.68 1.57 1 24 1 2 2 2 2 2 2 2 2 2 2 2 2 27.38 27.315 2;3 2.0461E-21 29465 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 176.6 153.24 6880500000 145850000 0 0 414040000 488460000 505260000 540090000 453450000 421690000 515640000 832270000 593160000 675720000 540810000 754070000 3058 3781 2794 26395;26396;26397;26398;26399;26400;26401;26402;26403;26404;26405;26406;26407;26408;26409;26410;26411;26412;26413;26414;26415;26416;26417;26418;26419 20936;20937;20938;20939;20940;20941;20942;20943;20944;20945;20946;20947;20948;20949;20950;20951;20952;20953;20954;20955;20956;20957;20958;20959;20960;20961;20962;20963 20961 15 ALLQTHPEAQRAIEAAPQEPEQK Unmodified 2554.314 0.31396394 3781 Q96CP2 FLYWCH2 FLYWCH family member 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 7 3 2 2 61.474 55.158 3;4 8.2484E-109 73598 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 192.64 178.77 1842200000 1554500000 116530000 171190000 0 0 0 0 0 0 0 0 0 0 0 0 3059 3781 2795 26420;26421;26422;26423;26424;26425;26426 20964;20965;20966;20967;20968;20969;20970;20971;20972 20968 9 ALLRLQDTYNLDTDTISK Unmodified 2079.0848 0.084798847 983 P13674 P4HA1 Prolyl 4-hydroxylase subunit alpha-1 yes yes 0 0 1 By MS/MS 2 0 1 1 83.725 75.594 3 1.5314E-48 98790 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 139.88 129.62 23934000 23934000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3060 983 2796 26427 20973 20973 1 ALLSALELK Unmodified 956.59063 0.59063271 1575 P49454 CENPF Centromere protein F yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.943 80.001 2 0.036457 92153 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 45.68 19.786 29841000 0 0 0 964310 1208500 2410900 2320700 2955300 1665000 3435000 2651900 2957200 1784500 2863000 4624900 3061 1575 2797 26428;26429;26430;26431;26432;26433;26434;26435;26436;26437;26438;26439 20974;20975 20975 2 ALLSAVTR Unmodified 829.50215 0.50215205 1340;1200 P35221;P26232 CTNNA1;CTNNA2 Catenin alpha-1;Catenin alpha-2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 47.674 47.746 2 0.018283 53361 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 64.567 4.9263 168540000 0 0 0 16222000 11351000 25259000 13980000 18158000 11425000 22838000 21092000 0 0 0 28218000 3062 1340;1200 2798 26440;26441;26442;26443;26444;26445;26446;26447;26448 20976 20976 1 ALLSDMVR Unmodified 903.48479 0.48478743 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 61.921 62.161 2 0.0058382 70924 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 134.66 81.98 689510000 0 0 0 0 0 48313000 51445000 59518000 33627000 72545000 87947000 99521000 63421000 70147000 103020000 3063 213 2799 26449;26450;26451;26452;26453;26454;26455;26456;26457;26458 20977;20978;20979;20980;20981;20982 20978 3 ALLSDMVR Oxidation (M) 919.4797 0.47970205 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.924 40.104 2 0.013593 44058 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 110.61 66.001 1102400000 0 0 0 61120000 75373000 71668000 98736000 73852000 81948000 99258000 104560000 155850000 104510000 78580000 96967000 3064 213 2799 26459;26460;26461;26462;26463;26464;26465;26466;26467;26468;26469;26470 20983;20984;20985;20986 20985 281 1 ALLSNIEK Unmodified 886.51238 0.51238239 4601 Q9NRG1 PRTFDC1 Phosphoribosyltransferase domain-containing protein 1 yes yes 0 0 0 By MS/MS 3 0 1 1 53.577 48.688 2 0.012704 60142 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 98.997 40.079 20192000 0 20192000 0 0 0 0 0 0 0 0 0 0 0 0 0 3065 4601 2800 26471 20987 20987 1 ALLSPFSTPVR Unmodified 1186.671 0.67100829 2270 Q13322 GRB10 Growth factor receptor-bound protein 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.877 78.934 2 6.1605E-06 91635 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 141.2 56.628 302640000 0 0 0 11231000 12579000 19949000 23055000 21184000 19299000 27448000 36630000 35504000 22576000 28511000 44668000 3066 2270 2801 26472;26473;26474;26475;26476;26477;26478;26479;26480;26481;26482;26483 20988;20989;20990;20991;20992;20993;20994;20995;20996;20997;20998;20999;21000;21001 20997 14 ALLSVHDTVAQK Unmodified 1280.7089 0.70885036 2772 Q5T2T1 MPP7 MAGUK p55 subfamily member 7 yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 51.98 45.303 2;3 5.4286E-06 62636 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 112.36 89.286 32282000 25513000 0 6768400 0 0 0 0 0 0 0 0 0 0 0 0 3067 2772 2802 26484;26485;26486 21002;21003;21004 21003 2 ALLTFYHVTK Unmodified 1191.6652 0.66519463 4919 Q9UI26 IPO11 Importin-11 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 68.134 68.185 3 0.027545 77918 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 32.523 25.383 53808000 0 0 0 1985200 1456900 10048000 2765300 3483100 3647100 7923100 3409900 0 3333400 4477900 11278000 3068 4919 2803 26487;26488;26489;26490;26491;26492;26493;26494;26495;26496;26497 21005;21006 21006 2 ALLTPVAIAAGR Unmodified 1151.7026 0.70264277 724 P00390 GSR Glutathione reductase, mitochondrial yes yes 0 0 0 By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 78.208 78.239 2 0.00052584 90357 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 78.264 56.736 43856000 0 0 0 1407200 1802200 2276500 1840200 0 0 2153900 6795000 10099000 0 3870400 13612000 3069 724 2804 26498;26499;26500;26501;26502;26503;26504;26505;26506 21007;21008;21009;21010 21010 4 ALLTPVAIAAGRK Unmodified 1279.7976 0.79760579 724 P00390 GSR Glutathione reductase, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 69.081 68.32 3 0.0033158 77017 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.382 40.432 109280000 12355000 0 0 2176400 2395700 4260200 0 0 4174400 0 9724100 23952000 4827000 8448300 36972000 3070 724 2805 26507;26508;26509;26510;26511;26512;26513;26514;26515;26516 21011;21012;21013;21014;21015;21016;21017 21012 7 ALLVELNK Unmodified 898.54877 0.54876789 2829 Q5VYS8 ZCCHC6 Terminal uridylyltransferase 7 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 61.535 61.56 2 0.032623 71456 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 54.205 21.422 18677000 0 0 0 2896400 0 3159900 2809900 0 3018600 0 3724100 0 0 3068400 0 3071 2829 2806 26517;26518;26519;26520;26521;26522 21018 21018 1 ALLVEVQLLESK Unmodified 1340.7915 0.79151736 129 O00231 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 92.644 86.816 2 4.6347E-15 90240 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 147.12 107.08 76633000 76633000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3072 129 2807 26523;26524 21019;21020;21021 21019 3 ALLVHDLQK Unmodified 1035.6077 0.60767975 3615 Q92538 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 41.976 42.056 2 0.0089253 46950 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 68.214 46.512 43435000 0 0 0 0 5193100 0 7505100 8609600 4789900 0 0 0 9566900 7770800 0 3073 3615 2808 26525;26526;26527;26528;26529;26530 21022;21023;21024;21025 21023 4 ALLVSANQTLK Unmodified 1156.6816 0.68157298 3157 Q86UV5 USP48 Ubiquitin carboxyl-terminal hydrolase 48 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.9 3.81 3 1 6 1 2 1 1 1 1 1 1 1 59.504 57.139 2 0.0021885 74620 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.04 59.803 177850000 89128000 57386000 1704500 0 0 6627900 0 0 0 0 7283600 7980900 2713900 5025300 0 3074 3157 2809 26531;26532;26533;26534;26535;26536;26537;26538;26539;26540 21026;21027;21028;21029;21030 21026 3 ALLVTASQCQQPAENK Unmodified 1756.8778 0.87778296 2055 Q01518 CAP1 Adenylyl cyclase-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.69 2.88 3 2 24 1 4 2 2 2 2 2 2 2 2 2 2 2 2 46.732 45.863 2;3 1.1015E-102 58034 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 215.08 203.56 986780000 3524000 163970000 0 26753000 20604000 85326000 37941000 33853000 26354000 60221000 84064000 114010000 62058000 76442000 191660000 3075 2055 2810 26541;26542;26543;26544;26545;26546;26547;26548;26549;26550;26551;26552;26553;26554;26555;26556;26557;26558;26559;26560;26561;26562;26563;26564;26565;26566;26567;26568;26569 21031;21032;21033;21034;21035;21036;21037;21038;21039;21040;21041;21042;21043;21044;21045;21046;21047;21048;21049;21050 21035 18 ALLYLCGGDD Unmodified 1095.4907 0.49066067 840 P07355;A6NMY6 ANXA2;ANXA2P2 Annexin A2;Putative annexin A2-like protein yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.24 2 1 10 1 2 1 1 1 1 1 1 1 1 1 1 77.678 76.469 2 0.0030408 92743 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.418 90.149 179320000 8782300 66798000 0 27480000 5107500 0 0 7265800 4238300 9211600 8995900 10025000 6952100 8272400 16188000 3076 840 2811 26570;26571;26572;26573;26574;26575;26576;26577;26578;26579;26580;26581;26582 21051;21052;21053;21054;21055;21056 21052 5 ALLYLPIAPEVEDPEENPYGPPPDAVQTSLMDEGASSEK Unmodified 4167.9722 0.97220302 2514 Q15291 RBBP5 Retinoblastoma-binding protein 5 yes yes 0 0 0 By MS/MS 3 0 1 1 98.013 94.705 3 8.7128E-05 113575 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 29.401 25.043 2782000 0 2782000 0 0 0 0 0 0 0 0 0 0 0 0 0 3077 2514 2812 26583 21057 21057 1 ALMASMAR Unmodified 849.42008 0.42007868 5031 Q9UNF1 MAGED2 Melanoma-associated antigen D2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 36.868 37.038 2 0.0049148 40950 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 128.86 80.619 353390000 0 0 0 18547000 23240000 24639000 23320000 30878000 16627000 43477000 41361000 45899000 30917000 0 54490000 3078 5031 2813 26584;26585;26586;26587;26588;26589;26590;26591;26592;26593;26594 21058;21059;21060;21061;21062;21063;21064;21065;21066;21067 21062 2 ALMASMAR 2 Oxidation (M) 881.40991 0.40990792 5031 Q9UNF1 MAGED2 Melanoma-associated antigen D2 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 2 1 9.0224 9.1787 2 0.015351 8392 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 47.849 40.435 70059000 0 0 0 5660500 0 5507300 8500600 4911700 4043100 5991600 9731000 0 8734600 10231000 6747800 3079 5031 2813 26595;26596;26597;26598;26599;26600;26601;26602;26603;26604;26605 21068;21069;21070 21069 6375;6376 2 ALMASMAR Oxidation (M) 865.41499 0.4149933 5031 Q9UNF1 MAGED2 Melanoma-associated antigen D2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 2 1 1 1 22.417 22.637 2 0.010155 23848 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 68.915 42.806 189040000 0 0 0 11155000 9183000 13083000 14147000 11652000 10974000 22655000 25872000 29647000 17240000 0 23434000 3080 5031 2813 26606;26607;26608;26609;26610;26611;26612;26613;26614;26615;26616;26617 21071;21072;21073 21071 6375;6376 3 ALMDEVVK Oxidation (M) 919.46847 0.46846866 733 P00558 PGK1 Phosphoglycerate kinase 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 6.78 3.9 1 8 2 16 3 5 3 2 1 2 1 1 1 2 2 2 2 30.545 29.472 2 0.0094893 37176 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 111.01 69.505 8547700000 213010000 7482300000 233490000 24148000 3943800 11232000 10087000 6923800 5082400 0 104580000 91869000 0 90361000 270670000 3081 733 2814 26618;26619;26620;26621;26622;26623;26624;26625;26626;26627;26628;26629;26630;26631;26632;26633;26634;26635;26636;26637;26638;26639;26640;26641;26642;26643;26644 21074;21075;21076;21077;21078;21079;21080;21081;21082;21083;21084;21085;21086;21087;21088;21089 21076 886 16 ALMDEVVK Unmodified 903.47355 0.47355404 733 P00558 PGK1 Phosphoglycerate kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.6 3.67 3 7 1 1 1 1 1 1 1 1 1 1 52.973 51.435 2 0.02908 65776 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.058 45.768 13372000000 576340000 11547000000 223580000 0 0 0 19618000 0 10599000 0 169520000 150920000 17461000 127860000 529390000 3082 733 2814 26645;26646;26647;26648;26649;26650;26651;26652;26653;26654 21090;21091 21090 1 ALMDSLGPEWR Oxidation (M) 1289.6074 0.60742176 2577 Q15785 TOMM34 Mitochondrial import receptor subunit TOM34 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 17 1 1 2 2 2 1 2 2 1 1 2 66.093 66.237 2 0.00082907 76221 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 73.985 63.753 115200000 0 0 0 4464000 3316800 11988000 13132000 11381000 3887100 0 16703000 20236000 6730500 4295800 19068000 3083 2577 2815 26655;26656;26657;26658;26659;26660;26661;26662;26663;26664;26665;26666;26667;26668;26669;26670;26671 21092;21093;21094;21095;21096;21097;21098;21099;21100;21101 21094 4225 9 ALMDSLGPEWR Unmodified 1273.6125 0.61250714 2577 Q15785 TOMM34 Mitochondrial import receptor subunit TOM34 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 78.77 78.811 2 0.00028233 91041 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 90.629 60.82 143380000 0 0 0 5822800 9833000 11507000 0 13219000 8553500 26072000 13410000 12146000 11293000 0 31522000 3084 2577 2815 26672;26673;26674;26675;26676;26677;26678;26679;26680;26681;26682 21102;21103;21104;21105;21106;21107;21108;21109;21110;21111;21112;21113;21114 21106 13 ALMEAVSHAK Unmodified 1055.5434 0.54336494 5276 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 37.539 31.833 2 0.0018332 44073 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 108.98 69.956 98172000 79138000 19035000 0 0 0 0 0 0 0 0 0 0 0 0 0 3085 5276 2816 26683;26684 21115;21116 21116 2 ALMEAVSHAK Oxidation (M) 1071.5383 0.53827956 5276 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 yes yes 0 1 0 By MS/MS 2 0 1 1 16.422 14.023 2 0.028527 17767 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 57.859 46.637 4993600 0 0 4993600 0 0 0 0 0 0 0 0 0 0 0 0 3086 5276 2816 26685 21117 21117 1 ALMGSPQLVAAVVR Oxidation (M) 1426.7966 0.79661951 1010 P14923 JUP Junction plakoglobin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 1 2 2 2 2 2 2 2 1 77.343 77.386 2;3 2.2208E-22 89616 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 145.99 134.82 1143500000 0 0 0 242070000 62933000 71535000 46556000 288860000 49431000 68188000 61628000 96417000 84786000 38920000 32160000 3087 1010 2817 26686;26687;26688;26689;26690;26691;26692;26693;26694;26695;26696;26697;26698;26699;26700;26701;26702;26703;26704;26705;26706;26707 21118;21119;21120;21121;21122;21123;21124;21125;21126;21127;21128;21129;21130;21131;21132 21131 1390 14 ALMGSPQLVAAVVR Unmodified 1410.8017 0.80170489 1010 P14923 JUP Junction plakoglobin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 83.594 83.678 2 0.00049574 96775 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 80.916 64.078 152590000 0 0 0 17910000 0 0 4650200 60726000 9665500 0 0 28483000 14721000 5011300 11424000 3088 1010 2817 26708;26709;26710;26711;26712;26713;26714;26715;26716 21133;21134;21135;21136;21137;21138 21133 6 ALMLELK Oxidation (M) 832.47283 0.47282576 3028 Q712K3 UBE2R2 Ubiquitin-conjugating enzyme E2 R2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 59.486 59.668 2 0.020282 67906 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 74.415 37.321 115350000 0 0 0 0 8099700 7836200 9800700 5851400 6575800 10977000 13371000 14496000 14390000 12584000 11369000 3089 3028 2818 26717;26718;26719;26720;26721;26722;26723;26724;26725;26726;26727 21139;21140;21141;21142;21143 21140 4642 5 ALMLELK Unmodified 816.47791 0.47791114 3028 Q712K3 UBE2R2 Ubiquitin-conjugating enzyme E2 R2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.451 69.53 2 0.050331 78772 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.717 36.608 85770000 0 0 0 2760100 4382600 4994400 4897300 4877000 3481200 6924800 10480000 7910700 8312700 9162800 17586000 3090 3028 2818 26728;26729;26730;26731;26732;26733;26734;26735;26736;26737;26738;26739 21144 21144 1 ALMNTQYGLER Unmodified 1294.634 0.63397086 4630 Q9NSV4 DIAPH3 Protein diaphanous homolog 3 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.943 56.069 2 0.00027409 63849 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 122.13 110.29 177930000 0 0 0 10945000 9929900 12794000 9727900 14075000 9603000 17266000 21377000 20546000 10573000 15641000 25448000 3091 4630 2819 26740;26741;26742;26743;26744;26745;26746;26747;26748;26749;26750;26751 21145;21146;21147;21148;21149;21150;21151;21152;21153;21154;21155 21153 11 ALMNTQYGLER Oxidation (M) 1310.6289 0.62888548 4630 Q9NSV4 DIAPH3 Protein diaphanous homolog 3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 2 1 1 2 1 1 1 1 2 1 1 40.834 40.978 2 0.00034125 44940 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 82.645 65.974 103580000 0 0 0 5349200 10663000 8192700 7559100 13583000 4849900 6532600 7059800 8342000 17977000 7422900 6048600 3092 4630 2819 26752;26753;26754;26755;26756;26757;26758;26759;26760;26761;26762;26763;26764;26765;26766 21156;21157;21158;21159;21160;21161;21162;21163;21164;21165;21166 21163 6021 9 ALMTSHGSVEGR Oxidation (M) 1259.5928 0.59283433 4455 Q9H8V3 ECT2 Protein ECT2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 11.683 11.85 3 0.005677 10419 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 40.725 28.148 12332000 0 0 0 0 0 0 0 0 5122700 7209200 0 0 0 0 0 3093 4455 2820 26767;26768;26769 21167;21168;21169 21169 5893 2 ALMTVGK Oxidation (M) 734.39966 0.39966081 366 O43776 NARS Asparagine--tRNA ligase, cytoplasmic yes yes 0 1 0 By MS/MS By MS/MS By matching 2 0 3 1 1 1 14.156 10.942 1 0.010391 14698 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.139 31.855 87640000 37977000 47720000 1942800 0 0 0 0 0 0 0 0 0 0 0 0 3094 366 2821 26770;26771;26772 21170;21171 21170 466 0 ALMVEWTDEFK Oxidation (M) 1383.6381 0.63805318 3659 Q92783 STAM Signal transducing adapter molecule 1 yes yes 0 1 0 By MS/MS 2 0 1 1 85.422 77.292 2 0.035018 100927 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.444 30.466 6260000 6260000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3095 3659 2822 26773 21172 21172 1 ALMVEWTDEFK Unmodified 1367.6431 0.64313856 3659 Q92783 STAM Signal transducing adapter molecule 1 yes yes 0 0 0 By MS/MS 2 0 1 1 90.798 82.668 2 0.0081369 107332 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.276 44.438 8387700 8387700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3096 3659 2822 26774 21173 21173 1 ALNAEEAR Unmodified 872.43519 0.4351947 652 O95391 SLU7 Pre-mRNA-splicing factor SLU7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 12.156 12.496 2 0.030197 10639 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.676 7.8275 11880000 0 0 0 0 0 0 0 0 0 3764600 3806900 0 0 0 4308800 3097 652 2823 26775;26776;26777 21174;21175;21176 21175 3 ALNALCDGLIDELNQALK Unmodified 1970.0143 0.014276441 1267 P30084 ECHS1 Enoyl-CoA hydratase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 1 3 99.215 93.988 2;3 0.00059982 117264 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.204 67.066 53771000 9402100 44369000 0 0 0 0 0 0 0 0 0 0 0 0 0 3098 1267 2824 26778;26779;26780;26781 21177;21178;21179;21180 21178 4 ALNEINQFYQK Unmodified 1366.6881 0.68811492 60 CON__P02663 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 64.151 64.054 2 1.9992E-05 73071 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 130.56 107.42 + 202130000 0 0 0 25036000 43593000 50845000 45904000 19151000 0 0 17603000 0 0 0 0 3099 60 2825 26782;26783;26784;26785;26786;26787 21181;21182;21183;21184;21185;21186;21187;21188 21182 8 ALNENLQDTVEK Unmodified 1372.6834 0.68342347 4969 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.64 2.9 1 1 9 2 1 1 1 1 1 1 1 1 1 46.444 45.708 2 0.0007538 50632 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 90.05 54.898 93769000 0 39228000 0 0 3624300 0 0 6020300 3522400 5473500 7152400 7094500 6503900 7017700 8131900 3100 4969 2826 26788;26789;26790;26791;26792;26793;26794;26795;26796;26797;26798 21189;21190;21191;21192;21193 21192 5 ALNEQIAR Unmodified 913.49813 0.49812931 214 O14777 NDC80 Kinetochore protein NDC80 homolog yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching 10 0 8 1 1 1 1 1 1 1 1 25.444 25.586 2 0.041524 27048 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 49.933 25.961 98253000 0 0 0 0 11699000 16100000 16554000 14974000 0 4496300 20152000 0 4274300 10002000 0 3101 214 2827 26799;26800;26801;26802;26803;26804;26805;26806 21194 21194 1 ALNGEQAAGHAR Unmodified 1193.5901 0.59013221 3838 Q96FS4 SIPA1 Signal-induced proliferation-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 9.3829 9.5133 3 0.00090619 6360 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 54.471 30.249 28534000 0 0 0 1256600 1608700 1660700 2231400 1875000 1538300 0 5398200 3316700 2345200 2767900 4535200 3102 3838 2828 26807;26808;26809;26810;26811;26812;26813;26814;26815;26816;26817 21195;21196;21197;21198;21199;21200 21198 6 ALNHEIEELEK Unmodified 1323.667 0.66704513 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.58 8 1 22 2 4 3 2 1 2 2 2 1 2 2 2 2 2 2 51.238 49.745 2;3 5.0612E-11 54840 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 130.56 108.89 1552700000 148290000 288480000 311790000 41386000 25509000 107950000 36240000 59091000 28963000 72440000 89553000 109970000 72909000 59249000 100860000 3103 643 2829 26818;26819;26820;26821;26822;26823;26824;26825;26826;26827;26828;26829;26830;26831;26832;26833;26834;26835;26836;26837;26838;26839;26840;26841;26842;26843;26844;26845;26846;26847;26848 21201;21202;21203;21204;21205;21206;21207;21208;21209;21210;21211;21212;21213;21214;21215;21216;21217;21218;21219;21220;21221;21222;21223;21224;21225;21226;21227;21228;21229 21221 24 ALNHSVEDIEPDLLTPR Unmodified 1917.9796 0.97960549 3243 Q8IWR0 ZC3H7A Zinc finger CCCH domain-containing protein 7A yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.858 76.967 3 0.0037477 88740 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 38.227 34.249 59603000 0 0 0 0 1367100 3670000 3132700 4857400 3709500 4492000 5410800 5405700 3303300 7083300 17172000 3104 3243 2830 26849;26850;26851;26852;26853;26854;26855;26856;26857;26858;26859 21230;21231;21232;21233;21234;21235;21236;21237;21238 21235 9 ALNILQSTNMAFGK Oxidation (M) 1522.7814 0.78136338 1424 P40937 RFC5 Replication factor C subunit 5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 77.893 78.035 2 4.2223E-09 90007 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 97.813 72.959 70653000 0 0 0 0 0 0 0 0 0 21915000 16287000 18600000 13851000 0 0 3105 1424 2831 26860;26861;26862;26863;26864;26865 21239;21240;21241;21242;21243;21244 21244 2240 6 ALNIVDQEGSLLGK Unmodified 1455.7933 0.79330827 3252 Q8IX01 SUGP2 SURP and G-patch domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.478 78.536 2 0.0017216 90759 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 72.34 61.12 75190000 0 0 0 3731000 4828500 4691100 4138600 5276800 3342100 7896400 7136000 8758900 6026800 6125600 13238000 3106 3252 2832 26866;26867;26868;26869;26870;26871;26872;26873;26874;26875;26876;26877 21245;21246;21247;21248;21249;21250;21251;21252;21253;21254 21246 10 ALNMAIPGGPK Unmodified 1067.5798 0.57975044 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 62.562 62.199 2 0.000284 71527 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 93.162 69.639 356330000 0 162280000 0 7271300 9780900 15307000 11336000 14119000 9541300 18575000 19482000 19866000 19774000 17957000 31036000 3107 2930 2833 26878;26879;26880;26881;26882;26883;26884;26885;26886;26887;26888;26889;26890 21255;21256;21257;21258;21259;21260;21261;21262;21263;21264;21265;21266;21267;21268;21269 21268 15 ALNMAIPGGPK Oxidation (M) 1083.5747 0.57466507 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS 6 4 2 2 1 1 1 1 43.421 41.348 2 0.0039133 54016 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.059 59.993 27477000 3585800 0 0 0 0 0 0 0 0 0 0 11739000 0 0 12152000 3108 2930 2833 26891;26892;26893;26894 21270;21271;21272 21270 4549 2 ALNRPPTYPTK Unmodified 1256.6877 0.68772099 1751 P55010 EIF5 Eukaryotic translation initiation factor 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 2 20 1 1 2 2 1 1 2 2 2 2 1 1 2 2 30.219 29.866 2;3 0.0059671 31007 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.991 11.662 295800000 39430000 8317600 0 15922000 12455000 15120000 15299000 19919000 10773000 20993000 7492300 22192000 20411000 22542000 64933000 3109 1751 2834 26895;26896;26897;26898;26899;26900;26901;26902;26903;26904;26905;26906;26907;26908;26909;26910;26911;26912;26913;26914;26915;26916 21273;21274;21275;21276 21273 2 ALNSIIDVYHK Unmodified 1271.6874 0.68738664 797 P05109 S100A8 Protein S100-A8;Protein S100-A8, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.8 2.86 3 17 1 1 1 2 1 2 1 2 1 2 2 1 1 1 1 67.63 66.859 2;3 6.3305E-05 77408 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 113.62 81.862 5113700000 74772000 59824000 10046000 2674800000 133570000 287300000 161520000 268630000 131450000 302510000 368870000 185830000 175520000 147550000 131460000 3110 797 2835 26917;26918;26919;26920;26921;26922;26923;26924;26925;26926;26927;26928;26929;26930;26931;26932;26933;26934;26935;26936 21277;21278;21279;21280;21281;21282;21283;21284;21285;21286;21287;21288;21289;21290;21291;21292;21293;21294;21295;21296;21297;21298;21299;21300;21301;21302;21303;21304;21305 21302 26 ALNSMGQDLERPLELR Oxidation (M) 1856.9414 0.94144585 2075 Q02413 DSG1 Desmoglein-1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 18 2 1 2 2 2 2 1 2 2 1 1 64.567 64.625 2;3 7.713E-20 74684 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 107.61 95.408 735000000 0 0 0 134740000 4443300 80524000 46824000 197140000 52583000 7463500 80977000 118980000 7436500 3878500 0 3111 2075 2836 26937;26938;26939;26940;26941;26942;26943;26944;26945;26946;26947;26948;26949;26950;26951;26952;26953;26954 21306;21307;21308;21309;21310;21311;21312;21313;21314 21313 3365 8 ALNSMGQDLERPLELR Unmodified 1840.9465 0.94653123 2075 Q02413 DSG1 Desmoglein-1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.089 76.138 3 0.00017136 87712 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 53.169 37.05 86548000 0 0 0 2296800 1846500 5263400 0 26175000 3331200 7328800 5677100 12428000 4036300 3194400 14971000 3112 2075 2836 26955;26956;26957;26958;26959;26960;26961;26962;26963;26964;26965 21315;21316;21317;21318;21319;21320;21321;21322;21323;21324 21320 9 ALNSTNSELQEAGEACMRK Unmodified 2107.9627 0.96265158 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 48.691 48.3 3 2.6048E-08 62989 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 51.819 38.192 42261000 0 0 3366000 0 0 6577800 0 5680500 0 9060400 11520000 6056300 0 0 0 3113 5189 2837 26966;26967;26968;26969;26970;26971;26972;26973;26974 21325;21326;21327;21328;21329;21330;21331;21332;21333 21326 8 ALNVAPVR Acetyl (Protein N-term) 880.51305 0.51305109 2832 Q5VZF2 MBNL2 Muscleblind-like protein 2 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 64.116 64.19 2 0.0023988 73219 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 89.673 67.542 53206000 0 0 0 5258000 3736000 3569100 0 3955300 0 0 8104300 6563000 5101900 7346300 9572400 3114 2832 2838 26975;26976;26977;26978;26979;26980;26981;26982;26983 21334;21335;21336;21337;21338;21339;21340 21338 7 ALNVAPVRDTK Acetyl (Protein N-term) 1224.6826 0.68263561 2832 Q5VZF2 MBNL2 Muscleblind-like protein 2 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.71 3.56 4 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 53.485 52.629 2 5.7365E-11 59688 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 126.07 103.43 1135500000 0 103990000 1423700 43823000 39327000 72918000 65320000 54106000 56144000 80967000 109970000 192120000 78168000 79418000 157830000 3115 2832 2839 26984;26985;26986;26987;26988;26989;26990;26991;26992;26993;26994;26995;26996;26997;26998;26999;27000 21341;21342;21343;21344;21345;21346;21347;21348;21349;21350;21351;21352;21353;21354;21355;21356;21357 21341 17 ALNVEPDGTGLTCSLAPNIISQL Unmodified 2382.2101 0.21007572 1263 P30044 PRDX5 Peroxiredoxin-5, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2 0.577 1 4 1 3 3 99.999 96.03 2;3 1.2275E-13 92051 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 81.884 78.741 5523200000 214390000 5308800000 0 0 0 0 0 0 0 0 0 0 0 0 0 3116 1263 2840 27001;27002;27003;27004;27005;27006 21358;21359;21360;21361;21362;21363 21361 6 ALPAPIEK Unmodified 837.496 0.49600404 748 P01857 IGHG1 Ig gamma-1 chain C region no no 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 41.258 41.082 2 0.020127 45490 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 63.054 53.706 230550000 0 0 0 135330000 0 0 0 95221000 0 0 0 0 0 0 0 3117 748 2841 27007;27008 21364 21364 1 ALPASETPK Unmodified 912.49165 0.49164694 571 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 21.012 20.891 2 0.0051773 21260 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 81.215 38.986 175940000 0 29503000 0 6844400 7284600 9748300 8174800 8174000 6535800 11662000 12835000 21814000 18711000 16042000 18610000 3118 571 2842 27009;27010;27011;27012;27013;27014;27015;27016;27017;27018;27019;27020;27021 21365;21366;21367;21368;21369;21370;21371;21372;21373;21374;21375 21371 11 ALPAVQQNNLDEDLIR Unmodified 1807.9428 0.94282606 1137 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 77.904 78.043 2 1.5357E-28 89714 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 176.78 164.28 64413000 0 0 0 0 0 3909900 3383700 0 0 5492800 8146600 12651000 4284300 10026000 16519000 3119 1137 2843 27022;27023;27024;27025;27026;27027;27028;27029 21376;21377;21378;21379;21380;21381;21382;21383 21379 8 ALPAVQQNNLDEDLIRK Unmodified 1936.0378 0.037789075 1137 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.19 2.31 1 2 24 1 1 1 2 2 2 2 2 2 2 2 2 2 2 2 71.208 70.888 2;3 3.3982E-29 81278 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 116.35 105.88 1302600000 250080 6531300 14422000 30544000 30014000 101580000 48644000 54993000 38082000 90994000 147320000 148130000 61749000 151530000 377780000 3120 1137 2844 27030;27031;27032;27033;27034;27035;27036;27037;27038;27039;27040;27041;27042;27043;27044;27045;27046;27047;27048;27049;27050;27051;27052;27053;27054;27055;27056 21384;21385;21386;21387;21388;21389;21390;21391;21392;21393;21394;21395;21396;21397;21398;21399;21400;21401;21402;21403;21404 21397 16 ALPCIVDVRDEQQISAAVEK Unmodified 2240.1471 0.14708153 2997 Q6YN16 HSDL2 Hydroxysteroid dehydrogenase-like protein 2 yes yes 0 0 1 By MS/MS 2 0 1 1 82.246 79.756 3 0.01298 96727 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 31.233 15.979 1994100 0 0 1994100 0 0 0 0 0 0 0 0 0 0 0 0 3121 2997 2845 27057 21405 21405 1 ALPDSGEDRDTK Unmodified 1302.6052 0.60517315 371 O43815 STRN Striatin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 7.7 3.52 2 1 7 3 1 1 1 1 1 1 1 13.303 12.401 2;3 0.0038184 15420 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.597 68.159 200240000 0 127370000 0 0 9398300 0 8492300 0 7124900 10440000 0 15400000 0 8027600 13990000 3122 371 2846 27058;27059;27060;27061;27062;27063;27064;27065;27066;27067 21406;21407;21408;21409;21410;21411 21409 4 ALPEFFNGK Unmodified 1021.5233 0.52328142 3687;3475 Q8TAQ2;Q92922 SMARCC2;SMARCC1 SWI/SNF complex subunit SMARCC2;SWI/SNF complex subunit SMARCC1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.131 72.201 2 0.00349 82951 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 107.32 77.941 369210000 0 0 0 22788000 21784000 32908000 25519000 30774000 20235000 39099000 37968000 36914000 27664000 29874000 43687000 3123 3475;3687 2847 27068;27069;27070;27071;27072;27073;27074;27075;27076;27077;27078;27079 21412;21413;21414;21415;21416;21417;21418;21419;21420;21421;21422;21423;21424 21418 11 ALPEPQEAQK Unmodified 1109.5717 0.57168818 2660 Q2YD98 UVSSA UV-stimulated scaffold protein A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 27.643 27.737 2 0.017731 30175 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 48.794 29.017 33092000 0 0 0 4694800 0 6545600 7864300 5914500 5486200 0 2586700 0 0 0 0 3124 2660 2848 27080;27081;27082;27083;27084;27085 21425 21425 1 ALPFWNEEIVPQIK Unmodified 1682.9032 0.90319307 1077 P18669;P15259;Q8N0Y7 PGAM1;PGAM2;PGAM4 Phosphoglycerate mutase 1;Phosphoglycerate mutase 2;Probable phosphoglycerate mutase 4 yes no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 2 1 6 1 2 1 1 1 1 1 1 94.422 92.722 2 0.00032744 108040 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.342 62.77 598630000 45392000 502860000 0 0 0 0 0 859400 0 1553600 3518300 2335900 0 2367900 39752000 3125 1077 2849 27086;27087;27088;27089;27090;27091;27092;27093;27094 21426;21427;21428;21429;21430;21431;21432 21428 7 ALPIIVK Acetyl (Protein N-term) 794.52658 0.52657589 3568 Q8WVY7 UBLCP1 Ubiquitin-like domain-containing CTD phosphatase 1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.31 3.31 1 5 23 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1 87.661 87.109 1;2 0.0068028 99291 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 69.39 69.39 484630000 48536000 295520000 1460200 6367300 5678000 13531000 9919600 6973900 7357600 12769000 16203000 20195000 8502300 12946000 18673000 3126 3568 2850 27095;27096;27097;27098;27099;27100;27101;27102;27103;27104;27105;27106;27107;27108;27109;27110;27111;27112;27113;27114;27115;27116;27117;27118;27119;27120;27121;27122;27123 21433;21434;21435;21436;21437;21438 21437 5 ALPLEAEPPPGPPSPSVTTEGQAVKPEPT Unmodified 2892.4757 0.47566911 3338 Q8N554 ZNF276 Zinc finger protein 276 yes yes 0 0 1 By MS/MS By MS/MS By matching 10 0 3 1 1 1 79.345 79.157 3 0.00020371 91560 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 26.273 20.73 7132500 0 0 0 1608800 2511200 0 3012500 0 0 0 0 0 0 0 0 3127 3338 2851 27124;27125;27126 21439 21439 1 ALPLEAEVAPVK Unmodified 1235.7125 0.71253876 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 3 1 1 1 1 1 1 1 1 1 1 1 1 1 74.658 73.727 2 0.00016797 85201 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 99.653 79.866 4049600000 0 2846200000 37011000 62112000 61816000 73487000 73863000 64540000 53315000 94740000 141030000 157560000 114470000 97601000 171820000 3128 1226 2852 27127;27128;27129;27130;27131;27132;27133;27134;27135;27136;27137;27138;27139;27140;27141;27142 21440;21441;21442;21443;21444;21445;21446;21447;21448;21449;21450;21451;21452;21453;21454;21455;21456;21457;21458 21458 16 ALPLIVGAQLIHADK Unmodified 1557.9243 0.92426287 2757 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 86.041 86.179 3 0.0048331 99604 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.685 35.293 12751000 0 0 0 0 0 2907300 0 0 0 0 3492900 0 0 0 6351100 3129 2757 2853 27143;27144;27145 21459 21459 1 ALPLPHFDTINLPEK Unmodified 1703.9247 0.9246568 5009 Q9ULW0 TPX2 Targeting protein for Xklp2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 86.673 85.328 3 0.00016357 108654 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.146 70.525 68170000 17581000 14272000 0 0 0 3338500 0 2835300 4438500 4344100 0 3971100 0 3051600 14338000 3130 5009 2854 27146;27147;27148;27149;27150;27151;27152;27153;27154 21460;21461;21462;21463;21464 21463 5 ALPSEELNR Unmodified 1027.5298 0.52982336 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.528 36.709 2 0.0051781 41195 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 81.191 44.795 2797200000 0 0 0 157800000 207010000 275880000 202030000 228590000 156240000 239540000 214790000 348630000 269680000 258670000 238370000 3131 2102 2855 27155;27156;27157;27158;27159;27160;27161;27162;27163;27164;27165;27166 21465;21466;21467;21468;21469;21470;21471;21472;21473;21474;21475;21476 21476 12 ALPSEELNRQLEK Unmodified 1525.81 0.81002097 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.89 2.72 3 1 24 1 2 1 2 2 2 2 2 2 2 2 2 2 2 2 50.529 49.848 2;3 7.9271E-15 55581 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 150.33 119.93 3926900000 9526900 93551000 73191000 245820000 226030000 252340000 404730000 290020000 302480000 261590000 342670000 379670000 310190000 326530000 408610000 3132 2102 2856 27167;27168;27169;27170;27171;27172;27173;27174;27175;27176;27177;27178;27179;27180;27181;27182;27183;27184;27185;27186;27187;27188;27189;27190;27191;27192;27193;27194 21477;21478;21479;21480;21481;21482;21483;21484;21485;21486;21487;21488;21489;21490;21491;21492;21493;21494;21495;21496;21497;21498;21499;21500;21501;21502;21503;21504;21505;21506;21507;21508;21509 21505 31 ALPSLNTGSSSPR Unmodified 1285.6626 0.66262845 186 O14545 TRAFD1 TRAF-type zinc finger domain-containing protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 47.209 47.437 2 0.0003578 53202 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 81.09 54.397 169570000 0 0 0 15719000 0 13358000 14757000 9038100 8604500 22414000 21122000 16289000 15339000 13180000 19752000 3133 186 2857 27195;27196;27197;27198;27199;27200;27201;27202;27203;27204;27205 21510;21511;21512;21513;21514;21515;21516;21517;21518 21515 9 ALPTSKPEGSLHSSPVGPSSSK Unmodified 2149.1015 0.10151154 5059 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 1 2 2 1 2 1 2 2 2 2 38.359 38.536 3;4 5.6339E-08 42619 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 42.746 29.119 336670000 0 0 0 27750000 25276000 6464000 18191000 20994000 5009800 33099000 10313000 50638000 37831000 26639000 74468000 3134 5059 2858 27206;27207;27208;27209;27210;27211;27212;27213;27214;27215;27216;27217;27218;27219;27220;27221;27222;27223;27224;27225;27226 21519;21520;21521;21522;21523;21524;21525;21526;21527;21528;21529;21530;21531;21532 21520 13 ALQAAIQQLAEAQPEATAK Unmodified 1951.0375 0.037454724 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 79.489 79.547 2;3 9.9086E-47 91813 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 162.32 147.76 716290000 0 0 0 24288000 55650000 75508000 40818000 50731000 40352000 97831000 63155000 76274000 50401000 61841000 79441000 3135 3641 2859 27227;27228;27229;27230;27231;27232;27233;27234;27235;27236;27237;27238;27239;27240;27241;27242;27243;27244;27245;27246;27247;27248;27249;27250 21533;21534;21535;21536;21537;21538;21539;21540;21541;21542;21543;21544;21545 21533 13 ALQAAYGASAPSVTSAALR Unmodified 1803.9479 0.94791144 333 O43488 AKR7A2 Aflatoxin B1 aldehyde reductase member 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 2 1 2 69.652 69.817 2;3 5.2893E-08 79554 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.55 77.673 65823000 0 0 0 2294300 0 3768100 2577400 3360000 0 4045000 11424000 11925000 0 0 26430000 3136 333 2860 27251;27252;27253;27254;27255;27256;27257;27258;27259;27260 21546;21547;21548;21549;21550;21551;21552;21553;21554;21555 21550 10 ALQAGQLENQAAPDDTQGSPDLGAVELR Unmodified 2863.3948 0.39479303 2603 Q16512 PKN1 Serine/threonine-protein kinase N1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 78.264 78.369 3 2.8334E-62 90652 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 111.4 90.514 92448000 0 0 0 0 6632800 7997900 5362400 7363000 6925400 12476000 10899000 9034600 6118800 7252000 12385000 3137 2603 2861 27261;27262;27263;27264;27265;27266;27267;27268;27269;27270;27271 21556;21557;21558;21559;21560;21561;21562;21563;21564;21565;21566;21567;21568 21562 13 ALQALEELR Unmodified 1041.5819 0.58185893 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.775 66.859 2 0.0099839 76768 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 65.156 34.544 63851000 0 0 0 5254700 3351700 6510600 3634300 5349100 2628700 5855800 4782300 7332100 5744100 4340500 9066800 3138 2501 2862 27272;27273;27274;27275;27276;27277;27278;27279;27280;27281;27282;27283 21569;21570;21571;21572;21573;21574;21575 21569 7 ALQALQQEHK Unmodified 1164.6251 0.62512073 4108 Q9BRG1 VPS25 Vacuolar protein-sorting-associated protein 25 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 2 2 2 1 2 2 1 20.869 21.035 2;3 1.7616E-15 22015 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 184.49 159.55 423870000 0 0 0 31849000 25934000 46376000 36001000 33544000 26087000 52735000 55238000 18966000 43381000 34851000 18910000 3139 4108 2863 27284;27285;27286;27287;27288;27289;27290;27291;27292;27293;27294;27295;27296;27297;27298;27299;27300;27301;27302;27303;27304;27305 21576;21577;21578;21579;21580;21581;21582;21583;21584;21585;21586;21587;21588;21589;21590;21591;21592;21593;21594;21595 21581 12 ALQAQEIECR Unmodified 1216.587 0.58702067 3395 Q8NBJ5 COLGALT1 Procollagen galactosyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 35.047 35.31 2 0.0019564 38507 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 110.87 78.031 26727000 0 0 0 0 1753500 0 0 0 0 0 6784300 0 0 5933600 12256000 3140 3395 2864 27306;27307;27308;27309;27310;27311 21596;21597;21598;21599 21596 4 ALQAQVQYQQQHEQQK Unmodified 1953.9657 0.96568676 2977 Q6UVJ0 SASS6 Spindle assembly abnormal protein 6 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 29.25 28.749 3 5.2123E-60 30592 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 175.66 149.36 219720000 0 15909000 0 0 8767300 18007000 13967000 17142000 13316000 12403000 28788000 25508000 22200000 16906000 26807000 3141 2977 2865 27312;27313;27314;27315;27316;27317;27318;27319;27320;27321;27322;27323;27324 21600;21601;21602;21603;21604;21605;21606;21607;21608;21609;21610;21611;21612;21613;21614;21615 21614 16 ALQASALK Unmodified 800.4756 0.47560295 771 P04075 ALDOA Fructose-bisphosphate aldolase A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 25.672 25.891 2 0.0063839 27187 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 101.33 8.8568 1651200000 0 0 0 78323000 29275000 0 53629000 49466000 29115000 59718000 212080000 243180000 53482000 191580000 651390000 3142 771 2866 27325;27326;27327;27328;27329;27330;27331;27332;27333;27334;27335 21616;21617;21618;21619;21620;21621;21622;21623;21624;21625 21619 7 ALQASALNAWR Unmodified 1199.6411 0.64110515 897 P09972 ALDOC Fructose-bisphosphate aldolase C yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 67.706 68.112 2 0.0013183 77438 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.573 49.804 8704800 0 0 0 0 0 0 0 0 0 0 2554200 0 0 0 6150600 3143 897 2867 27336;27337 21626 21626 1 ALQATVGNSYK Unmodified 1150.5982 0.59823728 943 P11279 LAMP1 Lysosome-associated membrane glycoprotein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 32.684 32.82 2 1.9194E-05 35926 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 124.92 100.03 361640000 0 0 0 76701000 21701000 26481000 21512000 31460000 17674000 26418000 31399000 48345000 35165000 24790000 0 3144 943 2868 27338;27339;27340;27341;27342;27343;27344;27345;27346;27347;27348 21627;21628;21629;21630;21631;21632;21633;21634;21635;21636;21637;21638 21628 10 ALQDIQK Unmodified 814.45487 0.45486751 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 22.377 17.987 2 0.023276 23737 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.2 20.842 351240000 10134000 341110000 0 0 0 0 0 0 0 0 0 0 0 0 0 3145 2495 2869 27349;27350 21639;21640 21640 2 ALQDLENAASGDAAVHQR Unmodified 1864.9028 0.90275216 3942 Q96P16 RPRD1A Regulation of nuclear pre-mRNA domain-containing protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 54.664 54.77 3 6.1965E-15 61243 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 92.307 88.136 199820000 0 0 0 8951800 11157000 17261000 14873000 13978000 9491100 23150000 0 30103000 15788000 22445000 32624000 3146 3942 2870 27351;27352;27353;27354;27355;27356;27357;27358;27359;27360;27361 21641;21642;21643;21644;21645;21646;21647;21648 21646 8 ALQDLENAASGDATVR Unmodified 1629.7958 0.79582747 4569 Q9NQG5 RPRD1B Regulation of nuclear pre-mRNA domain-containing protein 1B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 23 1 2 2 2 2 2 2 2 2 2 2 2 61.087 61.223 2;3 2.1868E-191 69773 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 225.97 155.06 885070000 0 0 0 30102000 47017000 54000000 54581000 112720000 50331000 66883000 100230000 108580000 76688000 73497000 110440000 3147 4569 2871 27362;27363;27364;27365;27366;27367;27368;27369;27370;27371;27372;27373;27374;27375;27376;27377;27378;27379;27380;27381;27382;27383;27384 21649;21650;21651;21652;21653;21654;21655;21656;21657;21658;21659;21660;21661 21654 11 ALQDLENAASGDATVRQK Unmodified 1885.9494 0.949368 4569 Q9NQG5 RPRD1B Regulation of nuclear pre-mRNA domain-containing protein 1B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 57.689 51.992 3 2.9905E-08 64473 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 99.569 89.288 110400000 9574700 87319000 13507000 0 0 0 0 0 0 0 0 0 0 0 0 3148 4569 2872 27385;27386;27387;27388 21662;21663;21664;21665;21666 21664 5 ALQDLGLR Unmodified 884.50797 0.50796571 702 O95865 DDAH2 N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 54.491 54.459 2 0.043141 62240 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 49.358 23.74 25780000 0 0 0 10511000 3987500 0 0 0 2362200 0 0 5843000 0 3075900 0 3149 702 2873 27389;27390;27391;27392;27393 21667 21667 1 ALQDLQLDQGNQK Unmodified 1469.7474 0.74742071 4559 Q9NQ48 LZTFL1 Leucine zipper transcription factor-like protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 54.767 49.42 2 5.6281E-21 63873 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.78 113.81 127260000 0 127260000 0 0 0 0 0 0 0 0 0 0 0 0 0 3150 4559 2874 27394;27395 21668;21669 21668 2 ALQDMSSTAPPAPQPSTRK Unmodified 1981.9891 0.98912432 276 O15357 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 41.798 42.306 3 9.8731E-05 46190 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.19 39.341 21570000 0 0 0 0 0 0 0 0 0 0 0 0 0 4943200 16627000 3151 276 2875 27396;27397 21670;21671;21672 21670 3 ALQDSAPDRPSPVER Unmodified 1636.8169 0.81689726 4469 Q9H9B1 EHMT1 Histone-lysine N-methyltransferase EHMT1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 33.035 33.207 3 8.9846E-10 36375 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 73.022 56.903 367480000 0 0 0 33147000 41285000 29541000 49117000 0 30288000 40627000 40918000 34434000 0 28814000 39307000 3152 4469 2876 27398;27399;27400;27401;27402;27403;27404;27405;27406;27407;27408 21673;21674;21675;21676;21677;21678;21679;21680;21681;21682 21675 8 ALQDVQIR Unmodified 941.52943 0.52942943 2927 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 40.461 40.582 2 0.012535 45242 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 74.415 15.21 80657000 0 0 0 11958000 0 0 16843000 0 11006000 20839000 0 20012000 0 0 0 3153 2927 2877 27409;27410;27411;27412;27413;27414 21683;21684;21685;21686;21687 21685 3 ALQEENRDLRK Unmodified 1370.7266 0.72662569 2598 Q16204 CCDC6 Coiled-coil domain-containing protein 6 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12.818 12.478 3 0.032296 18637 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.043 30.342 412620000 110980000 0 39383000 12303000 12723000 14608000 15395000 14536000 12118000 30046000 20883000 30384000 27363000 23172000 48738000 3154 2598 2878 27415;27416;27417;27418;27419;27420;27421;27422;27423;27424;27425;27426;27427;27428 21688;21689 21689 0 ALQEGDLASSR Unmodified 1145.5677 0.56766543 4661 Q9NV70 EXOC1 Exocyst complex component 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.906 30.179 2 0.00057517 32303 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 80.755 42.622 64554000 0 0 0 0 4985900 0 6066800 0 3571300 8569200 7215700 6368500 9682100 7471400 10623000 3155 4661 2879 27429;27430;27431;27432;27433;27434;27435;27436;27437;27438;27439;27440 21690;21691;21692;21693;21694;21695;21696;21697;21698 21693 5 ALQEGEGDLSISADRLSEK Unmodified 2016.9964 0.99637777 1579 P49589 CARS Cysteine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.57 3.85 3 1 3 1 2 1 1 1 1 65.602 62.496 3 2.8129E-10 80326 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.713 97.713 206740000 29492000 122110000 10724000 0 0 0 6523400 9886000 0 0 0 0 0 0 28004000 3156 1579 2880 27441;27442;27443;27444;27445;27446;27447 21699;21700;21701;21702;21703;21704;21705;21706 21700 6 ALQELPLCLR Unmodified 1211.6696 0.66962808 4574 Q9NQS1 AVEN Cell death regulator Aven yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 79.563 79.608 2 0.0018135 92384 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 101.43 91.357 115510000 0 0 0 9177300 8793800 10144000 7724000 0 7554300 16259000 14270000 17628000 0 8854500 15109000 3157 4574 2881 27448;27449;27450;27451;27452;27453;27454;27455;27456;27457 21707;21708;21709;21710 21709 3 ALQELQAAQAR Unmodified 1197.6466 0.64658446 2839 Q63ZY3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.32 39.5 2 0.00041881 44086 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 107.69 73.441 204940000 0 0 0 11683000 11576000 12920000 15180000 13360000 12356000 17385000 21493000 27963000 16314000 19356000 25358000 3158 2839 2882 27458;27459;27460;27461;27462;27463;27464;27465;27466;27467;27468;27469 21711;21712;21713;21714;21715;21716;21717;21718;21719;21720;21721;21722 21711 12 ALQEYSSISEK Unmodified 1253.6139 0.61394692 3810 Q96EF9;Q96K31 ZHX1-C8orf76;C8orf76 Zinc fingers and homeoboxes protein 1, isoform 2;Uncharacterized protein C8orf76 yes no 0 0 0 By MS/MS 2 0 1 1 42.543 37.395 2 0.038312 48713 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 63.076 22.046 14472000 0 14472000 0 0 0 0 0 0 0 0 0 0 0 0 0 3159 3810 2883 27470 21723 21723 1 ALQFLEEVK Unmodified 1075.5914 0.59136099 1410 P40227 CCT6A T-complex protein 1 subunit zeta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.41 3.95 1 7 2 12 3 5 2 1 1 1 1 1 1 1 1 1 1 1 1 78.56 77.069 2 0.0012735 93827 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 119.27 89.898 7497000000 363750000 4386000000 516960000 54900000 80943000 166810000 143770000 104880000 113620000 241940000 228550000 245090000 177270000 187400000 485090000 3160 1410 2884 27471;27472;27473;27474;27475;27476;27477;27478;27479;27480;27481;27482;27483;27484;27485;27486;27487;27488;27489;27490;27491;27492 21724;21725;21726;21727;21728;21729;21730;21731;21732;21733;21734;21735;21736;21737;21738;21739;21740;21741;21742;21743;21744 21738 20 ALQGASQIIAEIR Unmodified 1368.7725 0.77251325 154 O00429 DNM1L Dynamin-1-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 80.897 81.001 2 1.6214E-12 93283 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 124.67 72.187 120860000 0 0 0 0 4555000 12486000 5324000 8089700 7682000 16530000 10787000 14508000 7011000 9901500 23982000 3161 154 2885 27493;27494;27495;27496;27497;27498;27499;27500;27501;27502;27503 21745;21746;21747;21748;21749;21750;21751;21752;21753;21754;21755 21748 11 ALQGDYDQSR Unmodified 1151.5207 0.52071524 5278 Q9Y6D9 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 19.096 19.251 2 0.0009285 18347 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 112.84 94.617 82930000 0 0 0 0 7658100 0 9968400 0 7622600 0 0 0 0 14759000 42922000 3162 5278 2886 27504;27505;27506;27507;27508 21756;21757;21758;21759;21760;21761 21760 6 ALQGRECSLQVPEDELVSTLK Unmodified 2371.2053 0.20532469 948 P11441 UBL4A Ubiquitin-like protein 4A yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 84.147 80.529 3 0.00018961 100453 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.454 52.742 40341000 0 30555000 9786000 0 0 0 0 0 0 0 0 0 0 0 0 3163 948 2887 27509;27510 21762;21763;21764 21762 3 ALQHMAAMSSAQIVSATAIHNK 2 Oxidation (M) 2311.1413 0.14128464 1235 P28347 TEAD1 Transcriptional enhancer factor TEF-1 yes yes 0 2 0 By MS/MS 10 0 1 1 46.631 46.688 3 8.7625E-05 52572 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 40.012 31.923 4095500 0 0 0 0 0 0 4095500 0 0 0 0 0 0 0 0 3164 1235 2888 27511 21765 21765 1827;1828 1 ALQINTK Unmodified 786.45995 0.45995289 2833 Q5VZK9 LRRC16A Leucine-rich repeat-containing protein 16A yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 26.332 22.698 2 0.027431 30279 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.473 10.538 94157000 0 91869000 2288200 0 0 0 0 0 0 0 0 0 0 0 0 3165 2833 2889 27512;27513 21766 21766 1 ALQIPEVYLR Unmodified 1200.6867 0.68665836 2463 Q14C86 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 82.75 82.855 2 0.00057982 95505 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 152.63 117.82 246640000 0 0 0 0 10102000 16626000 11223000 14458000 12817000 24808000 20459000 22702000 23405000 26137000 63899000 3166 2463 2890 27514;27515;27516;27517;27518;27519;27520;27521;27522;27523;27524 21767;21768;21769;21770;21771;21772;21773;21774 21771 7 ALQISTLEER Unmodified 1158.6245 0.62445203 2895 Q6N069 NAA16 N-alpha-acetyltransferase 16, NatA auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 59.746 59.799 2 0.0017601 67950 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 88.819 54.011 1607200000 0 0 0 46479000 79657000 74288000 113710000 120520000 100650000 249200000 336570000 484010000 2115600 0 0 3167 2895 2891 27525;27526;27527;27528;27529;27530;27531;27532;27533;27534 21775;21776;21777;21778;21779;21780;21781 21776 7 ALQLEEERK Unmodified 1114.5982 0.59823728 1017 P15311 EZR Ezrin yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 23.704 23.653 2 0.030355 23997 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 95.909 11.412 165420000 0 0 27796000 4501100 3033600 2361500 3628500 2816400 2353900 4208000 24651000 18620000 8322000 15629000 47496000 3168 1017 2892 27535;27536;27537;27538;27539;27540;27541;27542;27543;27544;27545;27546;27547 21782;21783;21784;21785;21786 21786 5 ALQLEVDRLEELK Unmodified 1554.8617 0.86172219 350 O43663 PRC1 Protein regulator of cytokinesis 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.4 3.2 1 4 1 1 1 1 1 79.788 78.269 3 0.003473 90862 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 49.423 39.623 39864000 11029000 0 0 0 0 3979900 0 2432400 0 5856700 0 0 0 0 16565000 3169 350 2893 27548;27549;27550;27551;27552 21787;21788 21787 2 ALQLQLDGNGK Unmodified 1155.6248 0.62478638 3212 Q86YV9 HPS6 Hermansky-Pudlak syndrome 6 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 54.244 54.354 2 0.00052273 61339 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 92.051 38.276 36217000 0 0 0 0 2985400 3735500 3517500 3329600 2405500 4920200 3871200 0 6397900 5054000 0 3170 3212 2894 27553;27554;27555;27556;27557;27558;27559;27560;27561;27562;27563;27564 21789;21790;21791;21792;21793;21794;21795;21796;21797;21798;21799;21800 21797 12 ALQLSNSPGASSAFLK Unmodified 1589.8413 0.8413211 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74.891 74.024 2 5.7866E-23 94015 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 147.71 137.47 181600000 14079000 17854000 0 8114300 9952600 9591900 12486000 10191000 12496000 15410000 12743000 18053000 12456000 10693000 17481000 3171 2193 2895 27565;27566;27567;27568;27569;27570;27571;27572;27573;27574;27575;27576;27577;27578 21801;21802;21803;21804;21805;21806;21807;21808;21809;21810;21811;21812;21813;21814 21806 14 ALQNAVTTFVNR Unmodified 1332.715 0.71499837 230 O14964 HGS Hepatocyte growth factor-regulated tyrosine kinase substrate yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.613 69.688 2 0.00028411 79997 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 82.831 43.578 160270000 0 0 0 6002100 8139600 12472000 13423000 11752000 8257800 20173000 15910000 16916000 11435000 12790000 22998000 3172 230 2896 27579;27580;27581;27582;27583;27584;27585;27586;27587;27588;27589;27590 21815;21816;21817;21818;21819;21820;21821;21822;21823 21817 8 ALQPDWFQCLSDGEVSCK Unmodified 2138.9401 0.94012522 4463 Q9H974 QTRTD1 Queuine tRNA-ribosyltransferase subunit QTRTD1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 90.941 86.881 2 7.5546E-53 108056 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 142.85 133.56 32604000 0 32604000 0 0 0 0 0 0 0 0 0 0 0 0 0 3173 4463 2897 27591;27592 21824;21825 21824 2 ALQPLEEGEDEEK Unmodified 1485.6835 0.68348305 2444 Q14764 MVP Major vault protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 43.327 42.827 2 8.5712E-07 48607 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 104.22 87.997 120490000 0 12465000 0 13939000 6431700 0 10883000 12382000 7434900 10541000 19173000 0 17280000 9959400 0 3174 2444 2898 27593;27594;27595;27596;27597;27598;27599;27600;27601;27602;27603;27604;27605 21826;21827;21828;21829;21830;21831;21832;21833;21834;21835;21836;21837;21838;21839 21839 14 ALQQAYDVLIK Unmodified 1260.7078 0.70778773 2830 Q5VZ89 DENND4C DENN domain-containing protein 4C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.252 75.311 2 0.0057377 86529 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 103.55 80.833 237350000 0 0 0 9391400 17260000 19010000 22020000 21072000 15395000 22226000 19873000 29464000 18752000 17048000 25841000 3175 2830 2899 27606;27607;27608;27609;27610;27611;27612;27613;27614;27615;27616;27617 21840;21841;21842 21842 0 ALQQEQEIEQR Unmodified 1370.679 0.6790068 3208;3594 Q86YP4;Q8WXI9 GATAD2A;GATAD2B Transcriptional repressor p66-alpha;Transcriptional repressor p66-beta no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 29.415 29.92 2 1.7456E-15 32044 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 161.79 143.04 328300000 0 0 0 0 0 0 0 0 0 56345000 78712000 84934000 0 0 108300000 3176 3208;3594 2900 27618;27619;27620;27621;27622 21843;21844;21845;21846;21847;21848;21849;21850 21849 8 ALQQEQEIEQRLLQQGTAPAQAK Unmodified 2577.3511 0.35107772 3208 Q86YP4 GATAD2A Transcriptional repressor p66-alpha yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 80.87 77.231 3 2.5393E-125 96086 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 149.94 131.94 45352000 0 35446000 9906500 0 0 0 0 0 0 0 0 0 0 0 0 3177 3208 2901 27623;27624 21851;21852;21853;21854 21851 4 ALQQEQEIEQRLQQQAALSPTTAPAVSSVSK Unmodified 3335.7321 0.73211159 3594 Q8WXI9 GATAD2B Transcriptional repressor p66-beta yes yes 0 0 1 By MS/MS 2 0 1 1 82.888 80.427 4 0.020259 97443 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 20.312 9.6052 7363200 0 0 7363200 0 0 0 0 0 0 0 0 0 0 0 0 3178 3594 2902 27625 21855 21855 1 ALQQGLVGLELK Unmodified 1267.75 0.7499869 1802 P58107 EPPK1 Epiplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 79.032 78.509 2 6.3382E-08 90747 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 118.71 57.801 122920000 0 21196000 0 9536100 7209500 8815500 7722200 7181100 6364600 9359200 7984700 14687000 6805000 6400600 9658500 3179 1802 2903 27626;27627;27628;27629;27630;27631;27632;27633;27634;27635;27636;27637;27638;27639 21856;21857;21858;21859;21860;21861;21862;21863;21864;21865;21866;21867;21868;21869 21869 14 ALQQHLCVVQLTR Unmodified 1564.8508 0.85078035 2465 Q14CX7 NAA25 N-alpha-acetyltransferase 25, NatB auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 2 2 2 1 63.319 63.522 2;3 1.5302E-07 72557 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 97.734 83.043 146970000 0 0 0 0 0 0 32050000 59721000 47393000 0 0 7804000 0 0 0 3180 2465 2904 27640;27641;27642;27643;27644;27645;27646 21870;21871;21872;21873;21874 21874 5 ALQQLEK Unmodified 828.47052 0.47051757 2475 Q15020 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes yes 0 0 0 By MS/MS 2 0 1 1 25.365 21.162 2 0.016505 27849 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.57 3.3138 365850000 0 365850000 0 0 0 0 0 0 0 0 0 0 0 0 0 3181 2475 2905 27647 21875 21875 1 ALQQLQEELQNK Unmodified 1440.7573 0.75725712 2817 Q5VU43 PDE4DIP Myomegalin yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 68.279 62.987 2 0.0003899 80447 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.325 71.474 31560000 0 31560000 0 0 0 0 0 0 0 0 0 0 0 0 0 3182 2817 2906 27648;27649 21876;21877 21876 2 ALQQPLEQLTR Unmodified 1295.7197 0.7197494 3519 Q8TER5 ARHGEF40 Rho guanine nucleotide exchange factor 40 yes yes 0 0 0 By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 65.656 65.769 2 0.034747 75335 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 36.334 28.688 25450000 0 0 0 1485600 0 0 2419200 2274300 1790500 0 6693900 4186000 3634100 2966800 0 3183 3519 2907 27650;27651;27652;27653;27654;27655;27656;27657 21878 21878 1 ALQQQQQQQQQK Unmodified 1482.7539 0.75390307 2994 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 6.5569 6.4012 2 3.3342E-97 4700 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 251.3 230.31 157650000 2419700 0 0 9094900 10318000 11974000 14157000 12230000 18134000 12056000 15525000 13243000 13278000 9037500 16182000 3184 2994 2908 27658;27659;27660;27661;27662;27663;27664;27665;27666;27667;27668;27669;27670 21879;21880;21881;21882;21883;21884;21885;21886;21887;21888;21889;21890;21891 21889 13 ALQQVQEK Unmodified 942.51345 0.51344502 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 12.754 12.946 2 0.0068169 11423 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 95.541 45.002 76330000 0 0 0 5472800 0 0 9445100 0 7285600 9635500 11568000 0 12038000 7618600 13266000 3185 2459 2909 27671;27672;27673;27674;27675;27676;27677;27678 21892;21893;21894;21895 21894 1 ALQQYTLEPSEK Unmodified 1405.7089 0.70890994 5267 Q9Y678 COPG1 Coatomer subunit gamma-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 50.079 50.196 2 9.6149E-20 56160 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 159.11 104 135550000 0 0 0 17626000 0 47458000 0 0 0 0 0 34549000 35914000 0 0 3186 5267 2910 27679;27680;27681;27682;27683;27684;27685;27686;27687;27688;27689 21896;21897;21898;21899;21900;21901;21902;21903;21904;21905;21906;21907 21906 12 ALQQYTLEPSEKPFDLK Unmodified 2006.0361 0.03605774 5267 Q9Y678 COPG1 Coatomer subunit gamma-1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.196 76.254 3 0.0037817 88042 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 38.824 29.777 102400000 0 0 0 2642700 3290700 3953400 5066700 10142000 3460300 12790000 9975500 14701000 6375700 7576400 22426000 3187 5267 2911 27690;27691;27692;27693;27694;27695;27696;27697;27698;27699;27700;27701 21908;21909;21910 21910 3 ALQRPSAAAPQAENGPAAAPAVAAPAATEAPK Unmodified 2964.5417 0.54173204 2475 Q15020 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 1 2 2 2 2 2 2 2 2 2 2 2 59.796 59.939 3;4 2.7631E-34 67702 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.214 66.054 453790000 0 0 0 19261000 20936000 27779000 29395000 22354000 23414000 43945000 47299000 54860000 57919000 40911000 65720000 3188 2475 2912 27702;27703;27704;27705;27706;27707;27708;27709;27710;27711;27712;27713;27714;27715;27716;27717;27718;27719;27720;27721;27722;27723;27724 21911;21912;21913;21914;21915;21916;21917;21918;21919;21920;21921;21922;21923;21924 21914 14 ALQSGPPQSR Unmodified 1039.5411 0.54105675 153 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 14.391 14.58 2 0.002134 13890 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 86.136 49.95 91175000 0 0 0 0 4724900 6379000 5114300 5626100 4003300 8876000 8685000 10358000 13984000 11030000 12394000 3189 153 2913 27725;27726;27727;27728;27729;27730;27731;27732;27733;27734;27735 21925;21926;21927;21928;21929;21930;21931;21932 21926 8 ALQSGQCAGAALDVFTEEPPRDR Unmodified 2487.1812 0.1812352 304 O43175 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.287 76.345 3 1.5824E-81 87477 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 148.52 142.53 478630000 0 0 0 8649200 12264000 60419000 17439000 34517000 33934000 44240000 50727000 47855000 27509000 39670000 101410000 3190 304 2914 27736;27737;27738;27739;27740;27741;27742;27743;27744;27745;27746;27747 21933;21934;21935;21936;21937;21938;21939;21940;21941;21942;21943;21944;21945;21946;21947 21938 15 ALQSHLK Unmodified 795.46029 0.46028724 3094 Q7Z460 CLASP1 CLIP-associating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 13.204 10.002 2 0.033071 15479 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.086 29.576 98423000 64246000 17642000 16535000 0 0 0 0 0 0 0 0 0 0 0 0 3191 3094 2915 27748;27749;27750 21948;21949 21948 2 ALQSLACGKPTQR Unmodified 1428.7507 0.75073195 2330 Q13618 CUL3 Cullin-3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 29.078 29.624 3 0.0123 31039 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 29.981 7.9255 40436000 0 0 0 0 0 0 0 0 0 0 9688600 9235200 0 9152100 12360000 3192 2330 2916 27751;27752;27753;27754 21950;21951 21950 2 ALQSPALGLR Unmodified 1024.6029 0.60292873 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 2 1 1 2 1 1 1 1 1 1 1 1 57.964 58.024 2 4.0342E-06 65168 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 149.65 101.09 2660500000 0 0 0 192240000 155560000 253730000 217550000 142600000 166540000 240230000 269840000 291020000 224500000 182090000 324580000 3193 1518 2917 27755;27756;27757;27758;27759;27760;27761;27762;27763;27764;27765;27766;27767;27768 21952;21953;21954;21955;21956;21957;21958;21959;21960;21961;21962;21963;21964;21965;21966;21967 21961 16 ALQSQSWK Unmodified 946.48723 0.48723027 2828 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 25.247 25.448 2 0.0068947 25736 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.9 25.218 60970000 0 0 0 0 2900700 7892300 3763300 10118000 0 7424800 3995100 0 7048900 6357300 11470000 3194 2828 2918 27769;27770;27771;27772;27773;27774;27775;27776;27777 21968;21969;21970;21971;21972;21973;21974 21970 7 ALQSVGQIVGEVLK Unmodified 1439.8348 0.83477916 1898 P62333 PSMC6 26S protease regulatory subunit 10B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 7.18 3.74 3 1 7 1 2 1 1 1 1 1 1 1 1 92.433 90.743 2 3.6521E-44 113783 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 171.62 124.42 311890000 105460000 174060000 2581500 750720 1486600 1558500 0 0 0 10616000 5351700 2105100 0 0 7918100 3195 1898 2919 27778;27779;27780;27781;27782;27783;27784;27785;27786;27787;27788 21975;21976;21977;21978 21975 3 ALQTERNDLNK Unmodified 1300.6735 0.67352749 1409 P40222 TXLNA Alpha-taxilin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 15.292 15.463 2;3 0.00046088 14179 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 133.13 98.747 193460000 0 0 0 6747200 5204700 5788400 9372400 6230300 8021200 9273200 29893000 28302000 19228000 21894000 43501000 3196 1409 2920 27789;27790;27791;27792;27793;27794;27795;27796;27797;27798;27799;27800;27801;27802;27803;27804;27805;27806;27807;27808;27809;27810;27811;27812 21979;21980;21981;21982;21983;21984 21981 6 ALQTERNELNEK Unmodified 1443.7318 0.73177065 4652 Q9NUQ3 TXLNG Gamma-taxilin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 1 1 1 2 2 1 1 2 2 20.702 20.963 2;3 0.0001984 21266 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 109.66 48.014 165730000 0 0 0 4515500 7095200 8734600 6901600 0 7273300 16142000 24552000 29945000 12466000 14763000 33338000 3197 4652 2921 27813;27814;27815;27816;27817;27818;27819;27820;27821;27822;27823;27824;27825;27826;27827 21985;21986;21987;21988;21989;21990;21991;21992;21993;21994;21995 21991 11 ALQTTGTAK Unmodified 889.4869 0.48689592 1707 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 7.3257 7.4193 2 0.043067 5600 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 43.769 18.771 50988000 0 0 0 3713000 5200300 6135700 8893700 8145100 8320900 3115100 0 0 0 3110200 4354300 3198 1707 2922 27828;27829;27830;27831;27832;27833;27834;27835;27836 21996 21996 1 ALQTVIEMK Unmodified 1031.5685 0.56851706 3217;250 Q8IUD2;O15083 ERC1;ERC2 ELKS/Rab6-interacting/CAST family member 1;ERC protein 2 no no 0 0 0 By MS/MS 2 0 1 1 66.419 60.502 2 0.0096112 77293 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.833 31.157 34183000 0 34183000 0 0 0 0 0 0 0 0 0 0 0 0 0 3199 3217;250 2923 27837 21997;21998 21997 2 ALQVLVDQSK Unmodified 1099.6237 0.62372375 3891 Q96JC1 VPS39 Vam6/Vps39-like protein yes yes 0 0 0 By MS/MS 2 0 1 1 56.538 50.716 2 0.012792 65386 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.451 18.099 53325000 0 53325000 0 0 0 0 0 0 0 0 0 0 0 0 0 3200 3891 2924 27838 21999 21999 1 ALQVVPR Unmodified 781.48102 0.48102268 4211 Q9BWH6 RPAP1 RNA polymerase II-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 37.049 37.177 2 0.027168 41091 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 77.748 41.161 40601000 0 0 0 2478600 2802500 4146600 2389800 2911000 1936300 4817300 3348200 0 3223700 3866800 8679900 3201 4211 2925 27839;27840;27841;27842;27843;27844;27845;27846;27847;27848;27849 22000 22000 1 ALQYACGNALVCDNVEDARR Unmodified 2294.0532 0.053197918 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 1 By MS/MS 10 0 1 1 62.719 62.915 3 0.0099669 71064 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 40.432 22.416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3202 2431 2926 27850 22001 22001 1 ALRDEYIMSK Unmodified 1224.6173 0.61725816 715 O96017 CHEK2 Serine/threonine-protein kinase Chk2 yes yes 0 0 1 By matching By matching By matching By matching By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 39.116 39.396 3 0.0071957 42467 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.559 13.693 33201000 0 0 0 2808700 0 0 2800900 0 0 4331700 5899300 3372700 0 4022500 9965400 3203 715 2927 27851;27852;27853;27854;27855;27856;27857 22002;22003;22004 22002 3 ALREREEAER Unmodified 1257.6426 0.64256171 2398 Q14244 MAP7 Ensconsin yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.4207 6.5454 3 0.020488 4735 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 83.397 18.958 256420000 0 0 0 13858000 15518000 12319000 19731000 18600000 29034000 17304000 35651000 21941000 27250000 22484000 22734000 3204 2398 2928 27858;27859;27860;27861;27862;27863;27864;27865;27866;27867;27868;27869 22005;22006;22007;22008;22009 22008 3 ALRETLPAEQDLTTK Unmodified 1684.8996 0.89956426 1193 P25786 PSMA1 Proteasome subunit alpha type-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.36 2.17 2 23 1 1 2 2 2 2 2 1 2 2 2 2 2 2 54.72 54.457 2;3 6.9277E-08 62301 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 68.413 61.281 768410000 0 17925000 15573000 56644000 29531000 36530000 43651000 52407000 29798000 41603000 101270000 95096000 32176000 57973000 158230000 3205 1193 2929 27870;27871;27872;27873;27874;27875;27876;27877;27878;27879;27880;27881;27882;27883;27884;27885;27886;27887;27888;27889;27890;27891;27892;27893;27894 22010;22011;22012;22013;22014;22015;22016;22017;22018;22019;22020;22021;22022;22023;22024;22025;22026;22027;22028;22029;22030;22031;22032 22030 22 ALREYASYTLTDPFTAIK Unmodified 2059.0626 0.062606842 5321 yes yes 0 0 1 By MS/MS 10 0 1 1 51.821 51.985 3 0.0010098 58750 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 34.498 0 + 19846000 0 0 0 0 0 0 0 19846000 0 0 0 0 0 0 0 3206 5321 2930 27895 22033 22033 1 ALRNNTDPYK Unmodified 1190.6044 0.60438529 3311 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 13.767 13.894 3 0.031122 13455 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 28.797 22.194 36364000 0 0 0 3331900 2698600 2101600 3808700 3226600 2431100 4132300 3524300 5970100 5138700 0 0 3207 3311 2931 27896;27897;27898;27899;27900;27901;27902;27903;27904;27905 22034 22034 1 ALRPGDPGFCAR Unmodified 1315.6455 0.6455386 3993 Q96ST2 IWS1 Protein IWS1 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 1 1 2 1 2 1 1 37.229 37.441 3 0.00043739 41335 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 64.55 54.499 459340000 0 0 0 24467000 27204000 28631000 26018000 23819000 23928000 36503000 46103000 77753000 62108000 36390000 46421000 3208 3993 2932 27906;27907;27908;27909;27910;27911;27912;27913;27914;27915;27916;27917;27918;27919 22035;22036;22037;22038;22039;22040;22041;22042;22043;22044;22045;22046 22036 9 ALRQENAGLLGR Unmodified 1296.7262 0.72623176 434 O60826 CCDC22 Coiled-coil domain-containing protein 22 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.507 36.687 3 0.00028369 39002 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.34 66.62 122580000 0 0 0 6763200 6892400 12311000 6908000 8632700 7565300 8756600 8462800 14344000 11366000 10625000 19953000 3209 434 2933 27920;27921;27922;27923;27924;27925;27926;27927;27928;27929;27930;27931 22047;22048;22049;22050;22051;22052;22053;22054;22055;22056;22057;22058;22059 22050 13 ALRSDSYVELSQYR Unmodified 1685.8373 0.83729835 1684 P52298 NCBP2 Nuclear cap-binding protein subunit 2 yes yes 0 0 1 By MS/MS By matching By MS/MS 10 0 3 1 1 1 58.871 59.057 3 0.0065491 66531 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 40.801 35.592 11033000 0 0 0 0 0 0 0 0 2295600 0 0 0 2937800 5800100 0 3210 1684 2934 27932;27933;27934 22060 22060 1 ALRTDYNASVSVPDSSGPER Unmodified 2120.0134 0.013424818 1868 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 2 22 1 1 1 2 2 2 2 2 2 2 1 2 2 2 53.026 52.762 2;3 6.559E-62 59714 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 136.68 129.83 1851800000 0 20695000 27531000 35748000 42083000 166120000 93873000 118020000 68784000 231870000 192000000 149830000 131230000 161830000 412170000 3211 1868 2935 27935;27936;27937;27938;27939;27940;27941;27942;27943;27944;27945;27946;27947;27948;27949;27950;27951;27952;27953;27954;27955;27956;27957;27958 22061;22062;22063;22064;22065;22066;22067;22068;22069;22070;22071;22072;22073;22074;22075;22076;22077;22078;22079;22080 22070 20 ALRVDNAASEK Unmodified 1172.6149 0.61494998 1329;4333 P33240;Q9H0L4 CSTF2;CSTF2T Cleavage stimulation factor subunit 2;Cleavage stimulation factor subunit 2 tau variant no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 1 2 2 2 2 2 2 2 2 2 15.441 15.619 2;3 0.00023623 15051 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 84.718 60.426 520770000 0 0 0 19942000 20476000 3454000 30745000 23026000 19738000 46791000 61553000 77121000 61374000 62301000 94250000 3212 1329;4333 2936 27959;27960;27961;27962;27963;27964;27965;27966;27967;27968;27969;27970;27971;27972;27973;27974;27975;27976;27977;27978;27979;27980;27981 22081;22082;22083;22084;22085;22086;22087;22088;22089;22090;22091;22092;22093;22094 22092 11 ALRYPMAVGLNK Unmodified 1331.7384 0.73837635 5177 Q9Y3U8 RPL36 60S ribosomal protein L36 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 61.883 61.936 3 0.0066475 69762 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.523 26.311 96480000 0 0 0 6221100 5419700 7054900 6618000 8755600 6977700 11710000 11457000 0 0 9197500 23069000 3213 5177 2937 27982;27983;27984;27985;27986;27987;27988;27989;27990;27991 22095;22096;22097;22098;22099;22100;22101 22097 6 ALRYPMAVGLNK Oxidation (M) 1347.7333 0.73329097 5177 Q9Y3U8 RPL36 60S ribosomal protein L36 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 50.604 50.371 3 0.0028618 56085 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 69.276 53.904 9997600 0 0 0 4022300 0 0 0 5975300 0 0 0 0 0 0 0 3214 5177 2937 27992;27993;27994 22102;22103 22103 6548 1 ALSAAVADSLTNSPR Unmodified 1471.7631 0.76307078 2434 Q14687 GSE1 Genetic suppressor element 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.565 63.668 2 3.1909E-14 71892 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 100.04 83.366 74813000 0 0 0 3493100 5093800 0 4365400 5774600 4661500 6714700 7807200 8798400 8556400 6875700 12672000 3215 2434 2938 27995;27996;27997;27998;27999;28000;28001;28002;28003;28004;28005;28006 22104;22105;22106;22107;22108;22109;22110;22111;22112;22113;22114;22115 22111 12 ALSAEAALAR Unmodified 971.53999 0.53999412 423 O60678 PRMT3 Protein arginine N-methyltransferase 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 45.171 45.417 2 0.0018135 50934 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 101.43 49.028 120240000 0 0 0 0 7178100 8986400 8953400 8093400 0 10382000 14455000 14674000 10374000 11852000 25294000 3216 423 2939 28007;28008;28009;28010;28011;28012;28013;28014;28015;28016 22116;22117;22118;22119;22120;22121;22122;22123 22117 6 ALSAIADLLTNEHER Unmodified 1651.8529 0.85294842 426 O60716 CTNND1 Catenin delta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 82.59 82.73 3 0.00079555 95319 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.794 53.079 36678000 0 0 0 0 0 2259800 0 2063900 2578800 3255500 1574400 1794800 3066400 0 20084000 3217 426 2940 28017;28018;28019;28020;28021;28022;28023;28024 22124;22125;22126;22127;22128;22129 22127 6 ALSAVSAQAAAAQK Unmodified 1285.699 0.69901396 137 O00268 TAF4 Transcription initiation factor TFIID subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 37.492 37.267 2 6.0133E-19 40855 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 164.97 132.56 75463000 0 19357000 0 3196800 4023600 3125500 2540500 3921100 2749100 6093700 4273600 7858400 6379700 5097800 6846400 3218 137 2941 28025;28026;28027;28028;28029;28030;28031;28032;28033;28034;28035;28036;28037 22130;22131;22132;22133;22134;22135;22136;22137;22138;22139;22140;22141;22142 22140 13 ALSAVSTQQK Unmodified 1031.5611 0.56112349 2156 Q08379 GOLGA2 Golgin subfamily A member 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 17.74 17.898 2 0.0016488 17974 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 104.06 54.407 87055000 0 0 0 5379800 5022300 4852400 6462400 5550000 4479700 6963500 0 14440000 10078000 8166100 15661000 3219 2156 2942 28038;28039;28040;28041;28042;28043;28044;28045;28046;28047;28048 22143;22144;22145;22146;22147;22148;22149;22150 22144 8 ALSCHPDK Unmodified 926.428 0.42800083 4671 Q9NVM6 DNAJC17 DnaJ homolog subfamily C member 17 yes yes 0 0 0 By MS/MS By matching By MS/MS 2 0 3 1 1 1 7.2693 4.2774 2 0.031244 6284 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 75.213 51.24 39722000 5652800 24201000 9868200 0 0 0 0 0 0 0 0 0 0 0 0 3220 4671 2943 28049;28050;28051 22151 22151 1 ALSDADVQK Acetyl (Protein N-term) 987.48729 0.48728985 1375 P36543 ATP6V1E1 V-type proton ATPase subunit E 1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.1 2.7 1 9 1 1 1 1 1 1 1 1 1 1 47.076 47.719 2 0.0016684 45627 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 81.548 57.349 111950000 9924600 0 0 9417900 8455200 12203000 9136400 0 6636100 12270000 0 15936000 0 9163200 18810000 3221 1375 2944 28052;28053;28054;28055;28056;28057;28058;28059;28060;28061 22152;22153;22154;22155;22156;22157;22158 22154 7 ALSDDGVSDLEDPTLTPLK Unmodified 1984.9841 0.98408175 400 O60443 DFNA5 Non-syndromic hearing impairment protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.752 81.813 2 6.5259E-17 94642 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 117.08 95.322 134790000 0 0 0 3095900 6871000 12798000 7326200 8536800 5795300 20145000 15351000 14298000 7688900 8402900 24477000 3222 400 2945 28062;28063;28064;28065;28066;28067;28068;28069;28070;28071;28072;28073 22159;22160;22161;22162;22163;22164;22165;22166;22167;22168;22169 22160 11 ALSDHHIYLEGTLLK Unmodified 1708.9148 0.91482039 771 P04075 ALDOA Fructose-bisphosphate aldolase A yes yes 0 0 0 By MS/MS By MS/MS 7.67 3.3 1 2 1 2 74.159 73.288 3;4 3.3503E-12 89457 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 107.61 89.593 166280000 0 61960000 0 0 0 0 0 0 0 0 0 0 0 0 104320000 3223 771 2946 28074;28075;28076 22170;22171;22172 22172 2 ALSDLISATK Unmodified 1017.5706 0.57062555 5201 Q9Y4G6 TLN2 Talin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 66.212 66.119 2 0.029647 75976 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 43.282 13.809 15315000 0 0 0 2631400 0 4691800 0 0 0 0 0 0 3850300 4141800 0 3224 5201 2947 28077;28078;28079;28080 22173 22173 1 ALSEALTELGYK Unmodified 1293.6816 0.68163256 1335 P34896 SHMT1 Serine hydroxymethyltransferase, cytosolic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 77.275 77.468 2 3.3364E-08 89010 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 125.97 105.13 22485000 0 0 0 0 0 0 0 0 0 0 0 0 0 4176900 18308000 3225 1335 2948 28081;28082;28083 22174;22175;22176;22177 22174 4 ALSEAQAR Unmodified 844.44028 0.44028008 2604 Q16513 PKN2 Serine/threonine-protein kinase N2 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 9.4013 9.4971 2 0.029513 7808 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 56.091 24.801 69438000 0 0 0 9403000 7032800 0 11469000 7543000 6668700 0 0 11058000 10148000 6115500 0 3226 2604 2949 28084;28085;28086;28087;28088;28089;28090;28091 22178;22179;22180;22181 22181 3 ALSEAQARFNESSQK Unmodified 1664.8118 0.81181188 2604 Q16513 PKN2 Serine/threonine-protein kinase N2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 36.42 31.499 3 0.0012398 43556 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.898 48.145 117720000 78539000 0 39182000 0 0 0 0 0 0 0 0 0 0 0 0 3227 2604 2950 28092;28093 22182 22182 1 ALSEERTAIK Unmodified 1116.6139 0.61388734 430 O60763 USO1 General vesicular transport factor p115 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 23.792 19.768 2 0.021774 25262 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 117.01 56.578 123360000 27259000 34000000 62100000 0 0 0 0 0 0 0 0 0 0 0 0 3228 430 2951 28094;28095;28096 22183 22183 0 ALSEFAALMNTER Unmodified 1451.7079 0.70786408 2995 Q6YHK3 CD109 CD109 antigen yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 83.201 83.351 2 0.00081299 96441 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 69.979 45.204 5439000 0 0 0 0 0 0 0 1826800 0 0 0 0 0 3612200 0 3229 2995 2952 28097;28098;28099 22184;22185;22186 22185 3 ALSEFGSK Unmodified 837.42323 0.42323303 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 27.184 27.298 2 0.013039 29511 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 73.26 30.786 82765000 0 0 0 6092200 6982700 10448000 9582200 9134000 6705900 12320000 10587000 10913000 0 0 0 3230 2361 2953 28100;28101;28102;28103;28104;28105;28106;28107;28108 22187;22188;22189 22189 3 ALSEQILMVK Oxidation (M) 1146.6318 0.63184559 1542 P48552 NRIP1 Nuclear receptor-interacting protein 1 yes yes 0 1 0 By MS/MS 10 0 1 1 75.94 76.145 2 0.013952 87984 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 46.813 19.683 5514300 0 0 0 0 0 0 0 0 0 0 0 5514300 0 0 0 3231 1542 2954 28109 22190 22190 2451 1 ALSGGGSVASPPPSPAMPK Unmodified 1706.8662 0.86615564 497 O75420 GIGYF1 PERQ amino acid-rich with GYF domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 56.49 56.785 2 8.5744E-06 64308 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 62.258 47.286 9019900 0 0 0 0 0 0 0 0 0 0 6052900 0 0 2967000 0 3232 497 2955 28110;28111;28112;28113 22191;22192;22193;22194 22193 3 ALSGSSGYK Unmodified 868.42905 0.42904669 1242 P29084 GTF2E2 Transcription initiation factor IIE subunit beta yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 13.341 9.6964 2 0.036366 12875 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.374 77.935 119640000 7275600 112360000 0 0 0 0 0 0 0 0 0 0 0 0 0 3233 1242 2956 28114;28115 22195 22195 0 ALSGTSPDDVQPGPSVGPPSK Unmodified 1991.98 0.97999942 5133 Q9Y314 NOSIP Nitric oxide synthase-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.27 3.19 3 2 17 1 4 2 1 1 2 2 1 1 2 2 1 2 54.042 52.817 2;3 7.7833E-38 60772 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 130.27 114.73 417310000 7153400 69591000 0 24657000 12215000 15164000 36036000 27051000 0 23316000 33438000 54257000 30392000 22372000 61669000 3234 5133 2957 28116;28117;28118;28119;28120;28121;28122;28123;28124;28125;28126;28127;28128;28129;28130;28131;28132;28133;28134;28135;28136;28137 22196;22197;22198;22199;22200;22201;22202;22203;22204;22205;22206;22207;22208;22209;22210;22211 22206 14 ALSGVLEQDRVQSLK Unmodified 1641.905 0.90498399 5184 Q9Y450 HBS1L HBS1-like protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 68.72 62.757 3 0.00028063 80701 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 63.709 52.447 93834000 53943000 33848000 6043200 0 0 0 0 0 0 0 0 0 0 0 0 3235 5184 2958 28138;28139;28140 22212;22213;22214 22212 3 ALSIFNELRK Unmodified 1189.6819 0.68190733 4943 Q9UJX2 CDC23 Cell division cycle protein 23 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 74.087 74.068 3 0.0023834 84610 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.398 44.783 35595000 0 0 0 2443800 0 11103000 0 0 0 0 0 0 0 4028600 18019000 3236 4943 2959 28141;28142;28143;28144 22215;22216;22217 22216 3 ALSINTLVK Unmodified 957.58588 0.58588168 2828 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.719 69.796 2 0.017618 80023 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 55.531 13.878 162930000 0 0 0 6226300 8498000 18177000 11253000 9617900 7112200 17000000 14586000 19220000 9235800 13806000 28195000 3237 2828 2960 28145;28146;28147;28148;28149;28150;28151;28152;28153;28154;28155;28156 22218;22219;22220;22221;22222;22223 22220 6 ALSIVESEQDK Unmodified 1217.6139 0.61394692 2947 Q6PGP7 TTC37 Tetratricopeptide repeat protein 37 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.4 3.2 1 4 1 1 1 1 1 42.895 41.947 2 0.00058923 52831 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 111.65 60.774 68443000 0 33491000 0 0 0 14528000 5963800 0 4295500 0 10164000 0 0 0 0 3238 2947 2961 28157;28158;28159;28160;28161 22224;22225;22226;22227 22226 2 ALSMFSK Unmodified 782.39966 0.39966081 4669 Q9NVI1 FANCI Fanconi anemia group I protein yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 45.544 46.043 2 0.039143 50557 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.176 43.349 43993000 0 0 0 0 0 10659000 0 0 0 0 9411200 13493000 0 0 10431000 3239 4669 2962 28162;28163;28164;28165 22228 22228 1 ALSMPEK Unmodified 774.39458 0.39457544 5169 Q9Y3I1 FBXO7 F-box only protein 7 yes yes 0 0 0 By MS/MS 2 0 1 1 32.772 28.237 2 0.031432 37284 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.369 20.194 35666000 0 35666000 0 0 0 0 0 0 0 0 0 0 0 0 0 3240 5169 2963 28166 22229 22229 1 ALSMPLNGLK Acetyl (Protein N-term);Oxidation (M) 1100.59 0.58998078 5270 Q9Y696 CLIC4 Chloride intracellular channel protein 4 yes yes 1 1 0 By MS/MS By MS/MS 2.25 0.829 1 1 2 2 2 85.287 83.614 2 0.0013022 90574 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 93.195 75.21 45902000 22455000 23446000 0 0 0 0 0 0 0 0 0 0 0 0 0 3241 5270 2964 28167;28168;28169;28170 22230;22231 22231 6675 2 ALSMPLNGLK Acetyl (Protein N-term) 1084.5951 0.59506616 5270 Q9Y696 CLIC4 Chloride intracellular channel protein 4 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 5.83 4.18 1 2 3 2 1 1 1 1 91.293 90.077 2 0.00038959 91820 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 109.86 87.903 129870000 27335000 92095000 0 0 0 0 0 0 0 0 2180700 0 0 1388800 6865300 3242 5270 2964 28171;28172;28173;28174;28175;28176 22232;22233;22234;22235;22236 22234 5 ALSNLESIPGGYNALR Unmodified 1673.8737 0.87368386 4609;5018 Q9NRR5;Q9UMX0 UBQLN4;UBQLN1 Ubiquilin-4;Ubiquilin-1 no no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.743 78.801 2 4.6839E-05 91036 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 129.82 63.763 370050000 0 0 0 8369400 21065000 26337000 18669000 29212000 20491000 40409000 38377000 41042000 23353000 32924000 69804000 3243 4609;5018 2965 28177;28178;28179;28180;28181;28182;28183;28184;28185;28186;28187;28188 22237;22238 22237 1 ALSNLESIPGGYNALRR Unmodified 1829.9748 0.97479489 4609;5018 Q9NRR5;Q9UMX0 UBQLN4;UBQLN1 Ubiquilin-4;Ubiquilin-1 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.645 73.71 3 1.1178E-07 84753 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 84.046 63.998 1029600000 0 0 0 16999000 26934000 86228000 35320000 101680000 88656000 78628000 92847000 109210000 81364000 79373000 232340000 3244 4609;5018 2966 28189;28190;28191;28192;28193;28194;28195;28196;28197;28198;28199;28200 22239;22240;22241;22242;22243;22244;22245;22246;22247;22248;22249;22250;22251 22239 10 ALSNSVSNMGLSESSSLGSAK Unmodified 2024.9684 0.96844846 340 O43524 FOXO3 Forkhead box protein O3 yes yes 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 66.5 66.883 2 0.010972 76735 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 28.632 18.581 14070000 0 0 0 0 0 0 0 2573200 0 0 0 4977400 0 0 6519100 3245 340 2967 28201;28202;28203 22252 22252 1 ALSPAELR Unmodified 855.48142 0.48141661 2381 Q14160 SCRIB Protein scribble homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 40.718 40.853 2 0.018283 44746 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.567 29.851 167840000 0 0 0 16713000 10646000 0 15896000 19065000 10486000 17519000 17410000 23985000 20036000 16083000 0 3246 2381 2968 28204;28205;28206;28207;28208;28209;28210;28211;28212;28213 22253;22254 22254 2 ALSPLEEWLR Unmodified 1212.6503 0.65027285 1210 P26640 VARS Valine--tRNA ligase yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 89.404 89.539 2 0.0046672 103633 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.594 60.088 13813000 0 0 0 0 0 1283000 0 856860 0 2163700 1097500 0 0 1139100 7273200 3247 1210 2969 28214;28215;28216;28217;28218;28219 22255;22256;22257;22258 22256 4 ALSQAAVEEEEEEEEEEEPAQGK Unmodified 2559.0984 0.098395818 2739 Q5JTH9 RRP12 RRP12-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 6 1 1 1 1 1 1 56.109 56.086 3 0.032089 64460 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 19.21 16.157 21630000 0 0 0 3402300 3565800 0 3496700 2539200 3154800 0 0 0 0 0 5470900 3248 2739 2970 28220;28221;28222;28223;28224;28225 22259 22259 1 ALSQGVESVK Unmodified 1016.5502 0.55022446 346 O43615 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 26.795 27.016 2 0.0060966 28820 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 66.299 23.903 429290000 0 0 0 20089000 35534000 37399000 0 0 36295000 42914000 55865000 62899000 48809000 43630000 45856000 3249 346 2971 28226;28227;28228;28229;28230;28231;28232;28233;28234;28235 22260;22261;22262;22263;22264;22265;22266;22267 22262 5 ALSQLAEVEEK Unmodified 1215.6347 0.63468237 428;2323 Q13596;O60749 SNX1;SNX2 Sorting nexin-1;Sorting nexin-2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 53.813 52.959 2 1.2718E-20 59763 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 166.07 101.65 1303400000 0 284710000 3603000 38250000 25970000 126350000 54294000 35060000 41121000 88039000 143750000 140570000 84858000 58068000 178770000 3250 2323;428 2972 28236;28237;28238;28239;28240;28241;28242;28243;28244;28245;28246;28247;28248;28249;28250 22268;22269;22270;22271;22272;22273;22274;22275;22276;22277;22278;22279;22280;22281 22269 14 ALSQLALR Unmodified 870.5287 0.52870115 4356 Q9H211 CDT1 DNA replication factor Cdt1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 52.188 52.346 2 0.006213 60340 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 102.77 41.975 238830000 0 0 0 44554000 32736000 0 0 42789000 0 15290000 16270000 17649000 12498000 36987000 20059000 3251 4356 2973 28251;28252;28253;28254;28255;28256;28257;28258;28259 22282;22283;22284;22285;22286;22287;22288 22288 7 ALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGK Unmodified 3677.742 0.74202434 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 1 By MS/MS 2 0 1 1 88.689 80.559 3 9.3872E-52 104750 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.261 92.332 13260000 13260000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3252 2431 2974 28260 22289;22290 22289 2 ALSRQEMQEVQSSR Oxidation (M) 1663.7948 0.79478161 1141 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 2 1 2 2 2 2 2 2 1 2 1 1 16.246 16.404 3 6.1632E-23 15706 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 148.52 117.52 297650000 0 0 0 15180000 4664700 11962000 24365000 17100000 19314000 27313000 63838000 32638000 33627000 16713000 30937000 3253 1141 2975 28261;28262;28263;28264;28265;28266;28267;28268;28269;28270;28271;28272;28273;28274;28275;28276;28277;28278;28279;28280 22291;22292;22293;22294;22295;22296;22297;22298;22299;22300;22301;22302;22303;22304;22305;22306;22307;22308;22309;22310;22311 22300 1639 21 ALSRQEMQEVQSSR Unmodified 1647.7999 0.79986699 1141 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.68 1.57 1 24 1 2 2 2 2 2 2 2 2 2 2 2 2 31.474 31.395 2;3 3.1158E-50 34165 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 176.56 164.5 1273600000 89652000 0 0 47602000 36076000 62277000 82462000 81397000 54254000 74526000 168050000 142120000 75928000 150690000 208580000 3254 1141 2975 28281;28282;28283;28284;28285;28286;28287;28288;28289;28290;28291;28292;28293;28294;28295;28296;28297;28298;28299;28300;28301;28302;28303;28304;28305 22312;22313;22314;22315;22316;22317;22318;22319;22320;22321;22322;22323;22324;22325;22326;22327;22328;22329 22321 18 ALSSEGKPYVTK Unmodified 1278.682 0.68196691 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 22.796 23.338 3 0.030568 24074 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 33.685 25.172 30331000 0 0 0 0 0 0 0 0 0 0 8427600 8284100 6622400 0 6997000 3255 2344 2976 28306;28307;28308;28309 22330;22331 22330 2 ALSSGGSITSPPLSPALPK Unmodified 1778.9778 0.97781458 2994 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.44 77.497 2 1.3744E-64 89591 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 194.3 178.92 369080000 0 0 0 15484000 23938000 23936000 29420000 28494000 19184000 41460000 43518000 37611000 29543000 34297000 42191000 3256 2994 2977 28310;28311;28312;28313;28314;28315;28316;28317;28318;28319;28320;28321 22332;22333;22334;22335;22336;22337;22338;22339;22340;22341;22342;22343;22344;22345 22333 14 ALSSLELSSHLAK Unmodified 1354.7456 0.7456298 4079 Q9BPX3 NCAPG Condensin complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.82 3.56 6 16 2 2 2 1 1 1 2 2 1 2 1 2 2 1 62.941 61.415 2;3 2.3034E-48 84394 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 211.78 182.03 1049900000 498180000 401440000 54928000 4345000 7382100 3687600 13010000 15620000 0 801810 12635000 3052000 11503000 17914000 5443600 3257 4079 2978 28322;28323;28324;28325;28326;28327;28328;28329;28330;28331;28332;28333;28334;28335;28336;28337;28338;28339;28340;28341;28342;28343 22346;22347;22348;22349;22350;22351;22352;22353;22354;22355;22356;22357;22358 22353 11 ALSSPGQPSK Unmodified 970.50836 0.50835964 4053 Q99717 SMAD5 Mothers against decapentaplegic homolog 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 14.309 13.954 2 0.00091174 13193 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 114.89 61.34 238760000 0 25050000 0 12145000 16137000 16598000 14506000 12299000 10620000 20619000 19665000 21125000 21615000 18763000 29621000 3258 4053 2979 28344;28345;28346;28347;28348;28349;28350;28351;28352;28353;28354;28355;28356;28357 22359;22360;22361;22362;22363;22364;22365;22366;22367;22368;22369;22370;22371 22365 13 ALSSSADDASLVNASISSSVK Unmodified 2007.996 0.99604342 4577 Q9NQW6 ANLN Actin-binding protein anillin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 2 1 1 1 1 1 1 1 1 1 1 1 73.616 72.932 2;3 6.6384E-199 89850 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 236.43 222.08 219340000 0 104250000 0 3884000 9726900 0 6879600 7905900 9554900 20270000 15128000 13769000 6678200 8692600 12603000 3259 4577 2980 28358;28359;28360;28361;28362;28363;28364;28365;28366;28367;28368;28369;28370 22372;22373;22374;22375;22376;22377;22378;22379;22380;22381;22382;22383;22384;22385 22375 14 ALSTDPAAPNLK Unmodified 1196.6401 0.6401021 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 46.478 45.203 2 2.9996E-06 51160 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 112.01 89.771 1699000000 26440000 1149500000 4371600 25839000 25794000 59361000 34784000 24859000 22863000 64196000 48259000 57666000 40975000 39430000 74613000 3260 5187 2981 28371;28372;28373;28374;28375;28376;28377;28378;28379;28380;28381;28382;28383;28384;28385;28386 22386;22387;22388;22389;22390;22391;22392;22393;22394;22395;22396;22397;22398;22399;22400;22401;22402 22389 17 ALSTMDLQK Unmodified 1005.5165 0.51648149 4527 Q9HD42 CHMP1A Charged multivesicular body protein 1a yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 42.56 41.319 2 0.0075602 52513 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.798 56.296 241980000 2466800 170070000 0 7204500 0 6610900 0 7447800 0 10022000 0 11254000 0 9505800 17397000 3261 4527 2982 28387;28388;28389;28390;28391;28392;28393;28394;28395 22403;22404;22405;22406;22407 22404 5 ALSTMDLQK Oxidation (M) 1021.5114 0.51139611 4527 Q9HD42 CHMP1A Charged multivesicular body protein 1a yes yes 0 1 0 By MS/MS By MS/MS 5 3.56 1 1 1 2 1 30.98 28.204 2 0.016007 30206 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.703 25.253 36910000 0 31438000 0 0 0 0 0 0 0 0 0 0 0 0 5472600 3262 4527 2982 28396;28397;28398 22408;22409 22409 5948 2 ALSTTASTAAFDK Unmodified 1282.6405 0.64049603 1799 P57772 EEFSEC Selenocysteine-specific elongation factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 44.06 44.814 2 0.0020924 49774 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.255 29.691 11110000 0 0 0 0 0 0 0 0 0 0 0 11110000 0 0 0 3263 1799 2983 28399;28400;28401;28402;28403;28404;28405;28406 22410;22411;22412;22413;22414;22415;22416;22417;22418 22418 9 ALSVETEK Unmodified 875.46001 0.46001246 916 P10155 TROVE2 60 kDa SS-A/Ro ribonucleoprotein yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21.313 20.679 2 0.0043522 21811 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 111.01 37.969 679660000 22036000 492050000 3059300 10490000 5237000 5226100 7396800 8025400 6416300 10953000 19969000 19958000 17227000 19979000 31642000 3264 916 2984 28407;28408;28409;28410;28411;28412;28413;28414;28415;28416;28417;28418;28419;28420;28421 22419;22420;22421;22422;22423;22424;22425;22426;22427;22428;22429;22430;22431;22432 22421 12 ALSVGLVK Unmodified 785.50109 0.50108942 5036 Q9UNM6 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 51.566 52.124 2 0.049688 57817 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.305 13.82 145910000 0 0 0 0 0 0 0 0 0 0 98441000 0 0 0 47471000 3265 5036 2985 28422;28423 22433;22434 22433 0 ALSVGNIDDALQCYSEAIK Unmodified 2065.999 0.99902031 1313 P31948 STIP1 Stress-induced-phosphoprotein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.12 3.41 10 2 4 2 8 2 1 1 2 92.72 89.519 2;3 4.7901E-53 113761 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 157.86 126.98 673610000 68724000 558380000 25083000 0 0 0 0 0 0 0 3855100 0 0 1367700 16207000 3266 1313 2986 28424;28425;28426;28427;28428;28429;28430;28431;28432;28433;28434;28435;28436;28437;28438;28439 22435;22436;22437;22438;22439;22440;22441;22442;22443;22444;22445;22446;22447;22448;22449;22450;22451;22452 22437 16 ALSYASLDK Unmodified 966.50221 0.50221163 2966 Q6R327 RICTOR Rapamycin-insensitive companion of mTOR yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 46.476 45.578 2 0.014773 50375 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 57.96 34.651 83019000 0 31559000 0 0 0 7529600 0 0 6188700 6981800 7889000 9574000 0 6173000 7123100 3267 2966 2987 28440;28441;28442;28443;28444;28445;28446;28447;28448 22453;22454;22455 22455 3 ALSYLYEK Unmodified 985.51205 0.51204804 2998 Q6YP21 CCBL2 Kynurenine--oxoglutarate transaminase 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 56.373 50.398 2 0.01335 65318 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.798 74.489 154520000 7143300 143860000 3513300 0 0 0 0 0 0 0 0 0 0 0 0 3268 2998 2988 28449;28450;28451 22456 22456 1 ALTAEIVK Unmodified 843.50657 0.50656873 1379 P36776 LONP1 Lon protease homolog, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 43.709 43.854 2 0.017693 49312 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 65.252 23.158 145290000 0 0 0 0 10310000 21891000 16241000 8644600 7728800 28674000 0 0 15323000 0 36479000 3269 1379 2989 28452;28453;28454;28455;28456;28457;28458;28459 22457;22458 22457 2 ALTALFK Unmodified 762.46398 0.46397563 4831 Q9UBB4 ATXN10 Ataxin-10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 65.401 65.485 2 0.039327 74047 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 69.093 24.562 242490000 0 0 0 15337000 10840000 21056000 0 15189000 12118000 23715000 31743000 35309000 24441000 21365000 31375000 3270 4831 2990 28460;28461;28462;28463;28464;28465;28466;28467;28468;28469;28470 22459 22459 1 ALTALGLAVPR Unmodified 1080.6655 0.66552898 4196 Q9BVQ7 SPATA5L1 Spermatogenesis-associated protein 5-like protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 79.244 79.263 2 0.00026948 91452 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 91.069 58.228 50938000 0 0 0 3494400 3692300 6366900 3570900 0 0 6609900 6386100 0 6012900 5739600 9065300 3271 4196 2991 28471;28472;28473;28474;28475;28476;28477;28478;28479;28480 22460;22461;22462;22463;22464;22465;22466;22467;22468 22462 9 ALTASEIEDLK Unmodified 1188.6238 0.62378333 478 O75330 HMMR Hyaluronan mediated motility receptor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65.976 65.38 2 0.0058116 74776 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 72.607 48.385 213250000 0 62973000 565050 6651500 7862800 9918900 10144000 9716800 7927200 15285000 16574000 15060000 14021000 14557000 21997000 3272 478 2992 28481;28482;28483;28484;28485;28486;28487;28488;28489;28490;28491;28492;28493;28494 22469;22470;22471;22472;22473;22474;22475;22476;22477;22478 22475 8 ALTDLVSEGR Unmodified 1059.556 0.55603812 5203 Q9Y4H2 IRS2 Insulin receptor substrate 2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 56.121 56.632 2 0.002134 65656 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 86.136 2.9681 10113000000 0 0 0 0 0 0 0 0 0 0 6731000000 0 0 0 3381800000 3273 5203 2993 28495;28496 22479;22480 22480 2 ALTDSFR Unmodified 808.40792 0.40791731 1287 P30626 SRI Sorcin yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.727 37.908 2 0.020109 42382 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 108.98 74.278 324550000 0 0 0 13804000 10914000 15464000 19411000 18683000 10883000 29429000 40324000 34879000 24188000 29878000 76694000 3274 1287 2994 28497;28498;28499;28500;28501;28502;28503;28504;28505;28506;28507;28508 22481;22482 22481 2 ALTGDAAIQPR Unmodified 1111.5986 0.59857163 373 O43824 GTPBP6 Putative GTP-binding protein 6 yes yes 0 0 0 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 38.216 38.262 2 0.0014188 42226 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 72.879 44.457 8841100 0 0 0 0 1685600 0 2391800 0 1478100 0 3285500 0 0 0 0 3275 373 2995 28509;28510;28511;28512 22483 22483 1 ALTGHLEEVVLALLK Unmodified 1604.9501 0.95014327 773 P04083 ANXA1 Annexin A1 yes yes 0 0 0 By MS/MS 3 0 2 2 100.46 97.05 2;3 3.9768E-12 116353 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 112.13 92.883 14681000 0 14681000 0 0 0 0 0 0 0 0 0 0 0 0 0 3276 773 2996 28513;28514 22484;22485 22485 1 ALTHIDHSLSR Unmodified 1248.6575 0.65748349 1779 P56192 MARS Methionine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 2 1 1 1 1 2 27.236 27.441 2;3 0.0093765 28150 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.257 28.879 157420000 0 0 0 9199400 8652800 30860000 21362000 14437000 8490000 0 16133000 4242300 0 0 44047000 3277 1779 2997 28515;28516;28517;28518;28519;28520;28521;28522;28523;28524;28525 22486;22487;22488 22486 3 ALTHNGTPR Unmodified 965.50428 0.50427732 4498 Q9HB90 RRAGC Ras-related GTP-binding protein C yes yes 0 0 0 By MS/MS 2 0 1 1 9.1391 5.5005 2 0.037805 9166 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.107 40.337 10472000 10472000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3278 4498 2998 28526 22489 22489 1 ALTHNGTPRNAI Unmodified 1263.6684 0.66838253 4498 Q9HB90 RRAGC Ras-related GTP-binding protein C yes yes 0 0 1 By MS/MS 2 0 1 1 30.921 25.203 3 0.0025018 35324 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.683 40.874 62620000 62620000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3279 4498 2999 28527 22490 22490 1 ALTLDQWLEQHK Unmodified 1480.7674 0.76742787 4501 Q9HBL8 NMRAL1 NmrA-like family domain-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 86.823 82.014 3 0.005115 101986 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.667 74.078 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3280 4501 3000 28528 22491 22491 1 ALTLGALTLPLAR Unmodified 1308.8129 0.8129215 4128 Q9BSJ8 ESYT1 Extended synaptotagmin-1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 93.415 93.576 2 1.0645E-06 108529 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.058 87.097 5312500 0 0 0 0 0 0 0 0 479780 1218400 565560 0 0 0 3048800 3281 4128 3001 28529;28530;28531;28532 22492;22493 22493 2 ALTLIAGSPLK Unmodified 1082.6699 0.66994566 3170 Q86VP6 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 78.077 76.952 2 9.8678E-06 88736 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 138.98 125.33 1416500000 541130000 349420000 37068000 15795000 16261000 65220000 27343000 25566000 18039000 57259000 41778000 46006000 28708000 44617000 102310000 3282 3170 3002 28533;28534;28535;28536;28537;28538;28539;28540;28541;28542;28543;28544;28545;28546;28547;28548 22494;22495;22496;22497;22498;22499;22500;22501;22502;22503;22504;22505;22506;22507;22508;22509 22503 16 ALTLPGSSENEYIMK Oxidation (M) 1667.8076 0.80763771 1754 P55060 CSE1L Exportin-2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 70.103 68.579 2 1.2348E-07 78147 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.05 80.097 1230300000 42623000 932090000 28327000 0 11613000 41273000 0 0 8513800 32484000 20595000 27404000 16201000 29362000 39820000 3283 1754 3003 28549;28550;28551;28552;28553;28554;28555;28556;28557;28558;28559;28560;28561 22510;22511;22512;22513;22514;22515;22516;22517;22518;22519;22520;22521;22522 22513 2857 12 ALTLPGSSENEYIMK Unmodified 1651.8127 0.81272309 1754 P55060 CSE1L Exportin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 8.25 3.03 1 3 1 1 1 1 77.197 76.479 2 0.0012814 88111 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.332 59.7 130060000 0 19109000 0 0 0 0 0 0 0 0 0 0 11023000 23875000 76048000 3284 1754 3003 28562;28563;28564;28565 22523;22524 22523 2 ALTLQDLDNIWAAQAGK Unmodified 1826.9527 0.95266246 3701;164 O00507;Q93008 USP9Y;USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-Y;Probable ubiquitin carboxyl-terminal hydrolase FAF-X no no 0 0 0 By MS/MS 2 0 1 1 97.64 92.867 2 4.8944E-07 115005 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.407 82.868 18038000 0 18038000 0 0 0 0 0 0 0 0 0 0 0 0 0 3285 164;3701 3004 28566 22525 22525 1 ALTNIQNCMAEK Unmodified 1391.6537 0.65372002 3810 Q96EF9;Q96K31 ZHX1-C8orf76;C8orf76 Zinc fingers and homeoboxes protein 1, isoform 2;Uncharacterized protein C8orf76 yes no 0 0 0 By MS/MS 2 0 1 1 53.035 47.242 2 0.003542 61286 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.171 71.034 8891200 0 8891200 0 0 0 0 0 0 0 0 0 0 0 0 0 3286 3810 3005 28567 22526;22527 22527 2 ALTNLPHTDFTLCK Unmodified 1629.8185 0.81847717 4851 Q9UBQ5 EIF3K Eukaryotic translation initiation factor 3 subunit K yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 78.86 73.675 3 0.00052975 94471 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.457 77.677 311150000 160050000 131260000 19838000 0 0 0 0 0 0 0 0 0 0 0 0 3287 4851 3006 28568;28569;28570 22528;22529;22530 22529 3 ALTPASLQK Unmodified 927.53893 0.53893149 4945 Q9UJX4 ANAPC5 Anaphase-promoting complex subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38.482 37.788 2 0.033327 48374 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.734 20.314 404750000 23345000 202350000 0 8562200 12668000 12926000 9864300 14122000 7250200 14047000 13588000 15939000 32015000 19179000 18893000 3288 4945 3007 28571;28572;28573;28574;28575;28576;28577;28578;28579;28580;28581;28582;28583;28584 22531;22532;22533 22531 3 ALTQMEEAQR Unmodified 1175.5605 0.56047157 629 O95229 ZWINT ZW10 interactor yes yes 0 0 0 By MS/MS 10 0 2 2 29.269 29.271 2 0.028845 31788 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 58.433 31.831 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3289 629 3008 28585;28586 22534;22535 22534 2 ALTQMEEAQR Oxidation (M) 1191.5554 0.55538619 629 O95229 ZWINT ZW10 interactor yes yes 0 1 0 By matching By matching By matching By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 13.968 14.137 2 0.026457 13282 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 40.002 22.762 9008000 0 0 0 0 1121100 857960 0 0 0 1574600 0 1640100 2085200 0 1729000 3290 629 3008 28587;28588;28589;28590;28591;28592 22536 22536 767 1 ALTQMEEAQRK Unmodified 1303.6554 0.65543458 629 O95229 ZWINT ZW10 interactor yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching By matching 7.79 3.51 3 1 10 2 2 1 1 1 1 1 1 1 1 1 1 22.763 21.879 3 0.0083177 22677 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 41.689 31.459 126740000 0 21822000 17252000 7933100 6966400 11746000 6331700 11074000 0 2994700 13055000 9807900 6913000 0 10843000 3291 629 3009 28593;28594;28595;28596;28597;28598;28599;28600;28601;28602;28603;28604;28605;28606 22537;22538;22539;22540;22541 22541 4 ALTQMEEAQRK Oxidation (M) 1319.6503 0.65034921 629 O95229 ZWINT ZW10 interactor yes yes 0 1 1 By MS/MS By matching By MS/MS 10 0 3 1 1 1 8.6379 8.8348 3 0.0034384 7281 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 45.879 32.871 11156000 0 0 0 0 0 0 0 1585400 2153400 0 0 7417300 0 0 0 3292 629 3009 28607;28608;28609 22542;22543 22542 767 2 ALTQRPDYIK Unmodified 1203.6612 0.66117189 4944 Q9UJX3 ANAPC7 Anaphase-promoting complex subunit 7 yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 34.007 33.788 3 0.031557 43557 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 70.1 35.379 191400000 0 0 10084000 0 0 27953000 682170 0 0 50439000 0 48199000 0 2760400 51282000 3293 4944 3010 28610;28611;28612;28613;28614;28615;28616 22544;22545 22545 1 ALTQTGGPHVK Unmodified 1107.6037 0.60365701 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 17.127 16.308 2 6.3272E-10 25251 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 148.52 107.49 792460000 214850000 156180000 136980000 9485900 7849400 16995000 12416000 9761400 10430000 17652000 36942000 40085000 21201000 31246000 70387000 3294 1124 3011 28617;28618;28619;28620;28621;28622;28623;28624;28625;28626;28627;28628;28629;28630;28631;28632 22546;22547;22548;22549;22550;22551;22552;22553;22554;22555;22556;22557;22558;22559;22560;22561 22554 11 ALTSADGASEEQSQNDEDNQGSEK Unmodified 2509.0324 0.032441518 3622 Q92552 MRPS27 28S ribosomal protein S27, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 22.399 22.587 3 6.9576E-06 23866 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 44.052 43.521 35985000 0 0 0 2258400 2876100 4895600 0 0 0 3576800 6249800 0 4660100 6766400 4702000 3295 3622 3012 28633;28634;28635;28636;28637;28638;28639;28640 22562;22563 22563 2 ALTSEIALLQSR Unmodified 1300.7351 0.73506511 788 P04843 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.214 79.273 2 5.1585E-34 91429 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 174.41 113.98 271890000 0 0 0 12697000 15108000 21538000 14506000 37332000 18480000 27527000 27339000 40668000 18409000 15299000 22982000 3296 788 3013 28641;28642;28643;28644;28645;28646;28647;28648;28649;28650;28651;28652 22564;22565;22566;22567;22568;22569;22570;22571;22572;22573;22574;22575 22570 11 ALTSELANARDESK Unmodified 1503.7529 0.75290002 1198 P26038 MSN Moesin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 3.31 2.89 1 8 2 2 4 3 4 2 47.861 44.641 2;3 0 50619 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 293.94 251.55 3416900000 228790000 913210000 1751800000 0 0 0 0 0 0 0 0 0 0 0 523080000 3297 1198 3014 28653;28654;28655;28656;28657;28658;28659;28660;28661;28662;28663;28664;28665 22576;22577;22578;22579;22580;22581;22582;22583;22584;22585;22586;22587;22588;22589;22590;22591 22577 13 ALTSFLPAPTQLSQDQLEAEEK Acetyl (Protein N-term) 2457.2275 0.22749992 2320 Q13573 SNW1 SNW domain-containing protein 1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.79 2.8 2 1 16 3 2 1 2 1 2 2 2 2 2 97.433 96.855 2;3 5.4622E-89 116165 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 179.56 162.99 325120000 0 144390000 0 0 9958100 0 2446200 9376000 3753200 50061000 33595000 19083000 0 9717300 42742000 3298 2320 3015 28666;28667;28668;28669;28670;28671;28672;28673;28674;28675;28676;28677;28678;28679;28680;28681;28682;28683;28684 22592;22593;22594;22595;22596;22597;22598;22599;22600;22601;22602;22603;22604;22605 22595 13 ALTSQLTDEELAQGR Unmodified 1630.8162 0.81622856 1154 P23368 ME2 NAD-dependent malic enzyme, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 2 2 2 2 2 2 2 2 2 62.126 62.151 2;3 5.8075E-191 70906 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 227.37 210.35 747520000 0 0 0 29055000 94710000 66976000 58667000 68312000 63196000 97445000 117550000 151620000 0 0 0 3299 1154 3016 28685;28686;28687;28688;28689;28690;28691;28692;28693;28694;28695;28696;28697;28698;28699;28700;28701;28702 22606;22607;22608;22609;22610;22611;22612;22613;22614;22615;22616;22617;22618;22619 22614 13 ALTSVVNYREPK Unmodified 1375.746 0.74596415 2329 Q13617 CUL2 Cullin-2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 47.552 46.531 2;3 9.2953E-05 65391 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.021 67.814 310610000 91713000 0 0 12041000 8843300 23326000 15748000 13385000 9868900 24508000 20801000 19904000 16550000 18809000 35110000 3300 2329 3017 28703;28704;28705;28706;28707;28708;28709;28710;28711;28712;28713;28714;28715;28716 22620;22621;22622;22623;22624;22625;22626;22627;22628;22629;22630;22631;22632;22633 22626 13 ALTTMGFR Oxidation (M) 911.45349 0.4534873 1287 P30626 SRI Sorcin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 36.476 36.672 2 0.03122 39901 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 47.849 33.787 164600000 0 0 0 8520100 6534800 0 13313000 9977800 8640300 15933000 16134000 25074000 14631000 18122000 27720000 3301 1287 3018 28717;28718;28719;28720;28721;28722;28723;28724;28725;28726;28727 22634;22635;22636 22635 1897 3 ALTTMGFR Unmodified 895.45857 0.45857268 1287 P30626 SRI Sorcin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 53.467 53.233 2 0.03688 60248 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 94.262 51.138 37779000 0 0 0 8825300 5889300 0 11887000 11177000 0 0 0 0 0 0 0 3302 1287 3018 28728;28729;28730;28731 22637;22638 22637 1 ALTTMGFRLSPQAVNSIAK Oxidation (M) 2020.0775 0.0775454 1287 P30626 SRI Sorcin yes yes 0 1 1 By MS/MS 2 0 1 1 83.714 75.584 3 0.00066782 98757 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.185 42.263 37479000 37479000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3303 1287 3019 28732 22639 22639 1897 1 ALTTMGFRLSPQAVNSIAK Unmodified 2004.0826 0.082630778 1287 P30626 SRI Sorcin yes yes 0 0 1 By MS/MS 2 0 1 1 88.536 80.405 3 0.0014194 104516 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 35.678 30.137 18834000 18834000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3304 1287 3019 28733 22640 22640 1 ALTTPTHYK Unmodified 1030.5447 0.54474515 1707 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 21.674 21.631 2 0.0035332 22633 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 89.752 57.817 289520000 0 0 11336000 10481000 10375000 25369000 30521000 18137000 20935000 26626000 21962000 26450000 18127000 43852000 25345000 3305 1707 3020 28734;28735;28736;28737;28738;28739;28740;28741;28742;28743;28744;28745;28746 22641;22642;22643;22644;22645;22646;22647;22648;22649;22650;22651 22651 11 ALTVGGFIEEEK Unmodified 1291.666 0.66598249 4822 Q9P2N5 RBM27 RNA-binding protein 27 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 75.116 75.14 2 2.4878E-05 86622 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 93.058 73.296 49663000 0 0 0 2011400 3752700 0 4913500 0 4995900 7277600 9815000 7941000 3477900 5477600 0 3306 4822 3021 28747;28748;28749;28750;28751;28752;28753;28754;28755;28756;28757 22652;22653;22654;22655;22656;22657;22658;22659;22660;22661;22662 22660 11 ALTVPELTQQMFDAK Oxidation (M) 1706.8549 0.85492225 1963;2306 P68371;Q13509 TUBB4B;TUBB3 Tubulin beta-4B chain;Tubulin beta-3 chain no no 0 1 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 1 3 1 1 1 2 2 1 2 1 79.022 79.074 2;3 5.9891E-31 90810 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 137.01 24.88 4438800000 0 0 0 205170000 69876000 621950000 344360000 398380000 301890000 625310000 661100000 604260000 531420000 75100000 0 3307 1963;2306 3022 28758;28759;28760;28761;28762;28763;28764;28765;28766;28767;28768;28769;28770;28771;28772;28773 22663;22664;22665;22666;22667;22668;22669;22670;22671;22672;22673 22669 3157 8 ALTVPELTQQMFDAK Unmodified 1690.86 0.86000763 1963;2306 P68371;Q13509 TUBB4B;TUBB3 Tubulin beta-4B chain;Tubulin beta-3 chain no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 25 2 2 2 2 2 2 2 2 2 2 2 3 88.913 88.987 2;3 4.211E-42 103065 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 164.04 157.15 1431300000 0 0 0 10608000 51782000 58680000 42280000 116760000 61549000 169900000 120160000 143340000 66175000 125330000 464740000 3308 1963;2306 3022 28774;28775;28776;28777;28778;28779;28780;28781;28782;28783;28784;28785;28786;28787;28788;28789;28790;28791;28792;28793;28794;28795;28796;28797;28798 22674;22675;22676;22677;22678;22679;22680;22681;22682;22683;22684;22685;22686;22687;22688;22689;22690;22691;22692;22693;22694;22695;22696;22697;22698 22678 20 ALTVPELTQQMFDAR Oxidation (M) 1734.8611 0.86107026 4160 Q9BUF5 TUBB6 Tubulin beta-6 chain yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 22 1 3 1 2 2 2 2 1 2 3 2 1 79.778 79.833 2;3 3.1474E-11 92192 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 97.911 82.768 769460000 0 0 0 8545200 76335000 15209000 39478000 90658000 39505000 96315000 64701000 95617000 89933000 66001000 87165000 3309 4160 3023 28799;28800;28801;28802;28803;28804;28805;28806;28807;28808;28809;28810;28811;28812;28813;28814;28815;28816;28817;28818;28819;28820 22699;22700;22701;22702;22703;22704;22705;22706;22707;22708;22709;22710;22711;22712;22713;22714 22706 5644 9 ALTVPELTQQMFDAR Unmodified 1718.8662 0.86615564 4160 Q9BUF5 TUBB6 Tubulin beta-6 chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 1 1 2 2 2 2 2 1 2 2 89.596 89.722 2;3 6.5654E-10 103909 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.632 81.632 91205000 0 0 0 0 2464700 2110300 1443800 7177000 4408400 13847000 9323400 8316900 3234800 8688000 30191000 3310 4160 3023 28821;28822;28823;28824;28825;28826;28827;28828;28829;28830;28831;28832;28833;28834;28835;28836;28837;28838 22715;22716;22717;22718;22719;22720;22721;22722;22723;22724;22725;22726;22727 22718 12 ALTVPELTQQMFDSK Oxidation (M) 1722.8498 0.84983687 2350;4182 Q13885;Q9BVA1 TUBB2A;TUBB2B Tubulin beta-2A chain;Tubulin beta-2B chain no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 1 2 2 1 2 2 2 1 2 2 79.741 79.863 2 1.395E-20 93397 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 116.23 105.31 116050000 0 0 0 2280100 0 5873200 10831000 11365000 6024200 17367000 12116000 16117000 6347400 12155000 15579000 3311 2350;4182 3024 28839;28840;28841;28842;28843;28844;28845;28846;28847;28848;28849;28850;28851;28852;28853;28854;28855;28856 22728;22729;22730;22731;22732;22733;22734;22735;22736;22737;22738;22739;22740;22741;22742;22743;22744;22745 22733 3837 18 ALTVPELTQQMFDSK Unmodified 1706.8549 0.85492225 2350;4182 Q13885;Q9BVA1 TUBB2A;TUBB2B Tubulin beta-2A chain;Tubulin beta-2B chain no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 1 2 3 1 2 2 1 4 79.028 79.142 2;3 1.7696E-19 91326 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 85.837 0 3737000000 0 0 0 38357000 67580000 0 462110000 590950000 75990000 0 0 225420000 473730000 372820000 1430100000 3312 2350;4182 3024 28857;28858;28859;28860;28861;28862;28863;28864;28865;28866;28867;28868;28869;28870;28871;28872;28873 22746;22747;22748;22749;22750;22751;22752;22753;22754;22755;22756;22757;22758;22759;22760;22761;22762;22763;22764 22761 19 ALTVPELTQQVFDAK Unmodified 1658.8879 0.88793694 842 P07437 TUBB Tubulin beta chain yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.1 7 1 34 1 4 3 2 3 3 3 3 2 3 3 3 3 3 3 88.086 87.786 2;3 9.6034E-45 102437 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 119.32 108.46 16103000000 2087800 302390000 1614900 136480000 657010000 772340000 582670000 1134900000 869290000 2417500000 1753300000 1679400000 640110000 1329700000 3823900000 3313 842 3025 28874;28875;28876;28877;28878;28879;28880;28881;28882;28883;28884;28885;28886;28887;28888;28889;28890;28891;28892;28893;28894;28895;28896;28897;28898;28899;28900;28901;28902;28903;28904;28905;28906;28907;28908;28909;28910;28911;28912;28913;28914;28915 22765;22766;22767;22768;22769;22770;22771;22772;22773;22774;22775;22776;22777;22778;22779;22780;22781;22782;22783;22784;22785;22786;22787;22788;22789;22790;22791;22792;22793;22794;22795;22796;22797;22798;22799;22800;22801;22802;22803;22804;22805;22806;22807;22808;22809;22810;22811;22812;22813;22814;22815;22816 22816 46 ALTYDEK Unmodified 838.40725 0.40724861 4152 Q9BTW9 TBCD Tubulin-specific chaperone D yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 20.97 17.201 2 0.019046 22645 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.72 42.7 72165000 0 72165000 0 0 0 0 0 0 0 0 0 0 0 0 0 3314 4152 3026 28916;28917 22817;22818 22817 2 ALVADSHPESER Unmodified 1309.6262 0.62624295 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 19.021 19.217 2;3 0.00043532 18252 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.974 70.193 345680000 0 0 0 16794000 13246000 34727000 16247000 16580000 12131000 40790000 43005000 36652000 24850000 24464000 66193000 3315 2047 3027 28918;28919;28920;28921;28922;28923;28924;28925;28926;28927;28928;28929;28930;28931;28932;28933;28934;28935;28936;28937;28938;28939;28940;28941 22819;22820;22821;22822;22823;22824;22825;22826;22827;22828;22829;22830;22831;22832;22833;22834 22825 10 ALVAESHNMK Oxidation (M) 1114.5441 0.54409322 3618 Q92541 RTF1 RNA polymerase-associated protein RTF1 homolog yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.87 3 5 1 1 1 1 1 1 1 1 9.7868 8.7182 2 0.00080749 11864 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.5 79.102 95834000 25114000 30053000 27709000 0 0 0 2032600 0 0 1119300 0 3398400 1833800 0 4574700 3316 3618 3028 28942;28943;28944;28945;28946;28947;28948;28949 22835;22836;22837;22838;22839;22840;22841;22842 22837 5118 8 ALVAESHNMK Unmodified 1098.5492 0.5491786 3618 Q92541 RTF1 RNA polymerase-associated protein RTF1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.87 3 5 1 1 1 1 1 1 1 1 18.954 17.742 2 0.0033066 23317 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 96.19 53.276 149770000 85630000 13954000 22880000 0 0 0 0 0 0 0 5152400 6006300 5444400 3411900 7286400 3317 3618 3028 28950;28951;28952;28953;28954;28955;28956;28957 22843;22844;22845;22846;22847;22848;22849 22847 6 ALVAMNENLK Unmodified 1101.5852 0.58522975 2712 Q567U6 CCDC93 Coiled-coil domain-containing protein 93 yes yes 0 0 0 By MS/MS 10 0 1 1 51.684 52.361 2 0.00739 58343 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.582 42.796 5172400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5172400 3318 2712 3029 28958 22850 22850 1 ALVATPGK Unmodified 755.45414 0.45413923 1085 P19338 NCL Nucleolin yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 28.892 23.93 1 0.034536 31340 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.25 48.406 160460000 4880300 155580000 0 0 0 0 0 0 0 0 0 0 0 0 0 3319 1085 3030 28959;28960 22851 22851 0 ALVATPGKK Unmodified 883.5491 0.54910224 1085 P19338 NCL Nucleolin yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 20.913 16.716 2 0.040224 24141 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.142 46.076 78090000 71704000 6386300 0 0 0 0 0 0 0 0 0 0 0 0 0 3320 1085 3031 28961;28962 22852 22852 0 ALVAVLLSR Unmodified 940.60695 0.60695147 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.47 80.532 2 0.0033037 92183 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 93.374 72.675 73852000 0 0 0 2506900 3643900 9978800 4612000 4036300 5895300 8192300 4425300 9000400 4303800 5117600 12139000 3321 3641 3032 28963;28964;28965;28966;28967;28968;28969;28970;28971;28972;28973;28974 22853;22854;22855;22856;22857;22858;22859;22860;22861;22862;22863;22864 22860 12 ALVAYYQK Unmodified 954.51747 0.51746776 1879 P62249 RPS16 40S ribosomal protein S16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.57 2.95 2 2 17 2 2 1 1 2 1 1 1 1 2 2 2 1 2 42.777 41.863 1;2 0.011865 46669 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 118.01 20.414 2496700000 665510000 318930000 0 65443000 94909000 123810000 75391000 85541000 71908000 144390000 164950000 207830000 184260000 113490000 180370000 3322 1879 3033 28975;28976;28977;28978;28979;28980;28981;28982;28983;28984;28985;28986;28987;28988;28989;28990;28991;28992;28993;28994;28995 22865;22866;22867;22868;22869;22870;22871;22872;22873;22874;22875;22876;22877;22878 22865 11 ALVDGPCTQVR Unmodified 1214.6078 0.60775611 1640 P50914 RPL14 60S ribosomal protein L14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 41.803 42.044 2 0.0006603 47173 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 78.113 56.585 199490000 0 0 0 0 13795000 11808000 11678000 16013000 9111500 21481000 17355000 27492000 22993000 23009000 24751000 3323 1640 3034 28996;28997;28998;28999;29000;29001;29002;29003;29004;29005;29006 22879;22880;22881;22882;22883;22884;22885;22886;22887;22888;22889;22890 22879 12 ALVDGPCTQVRR Unmodified 1370.7089 0.70886714 1640 P50914 RPL14 60S ribosomal protein L14 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 34.434 34.54 3 0.03226 36994 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 35.006 12.32 26106000 0 0 0 0 0 8422900 0 7844600 0 9838500 0 0 0 0 0 3324 1640 3035 29007;29008;29009;29010 22891;22892 22892 2 ALVDHENVISCPHLGASTK Unmodified 2047.0157 0.015673424 304 O43175 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.68 1.57 1 24 1 2 2 2 2 2 2 2 2 2 2 2 2 56.067 56.037 3;4 1.0205E-65 62831 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 149.36 122.81 3778800000 0 0 19962000 121130000 88256000 368460000 190320000 227970000 167970000 352830000 395520000 417270000 310570000 363730000 754840000 3325 304 3036 29011;29012;29013;29014;29015;29016;29017;29018;29019;29020;29021;29022;29023;29024;29025;29026;29027;29028;29029;29030;29031;29032;29033;29034;29035 22893;22894;22895;22896;22897;22898;22899;22900;22901;22902;22903;22904;22905;22906 22901 6 ALVDILSEVSK Unmodified 1172.6653 0.66525421 4096 Q9BQG0 MYBBP1A Myb-binding protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 87.322 87.138 2 0.0021805 100699 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.893 52.69 62393000 0 17106000 0 1564400 2178100 2251100 1805300 2533800 2598900 5607900 4491900 4857200 4891100 4835200 7672600 3326 4096 3037 29036;29037;29038;29039;29040;29041;29042;29043;29044;29045;29046;29047;29048 22907;22908;22909;22910;22911;22912;22913;22914;22915;22916;22917;22918 22910 12 ALVDPGPDFVVCDEGHILK Unmodified 2080.0299 0.029926505 1498 P46100 ATRX Transcriptional regulator ATRX yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 87.803 81.316 3 0.0011583 103043 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 44.788 37.838 29612000 5208800 24404000 0 0 0 0 0 0 0 0 0 0 0 0 0 3327 1498 3038 29049;29050 22919;22920 22919 2 ALVDSADDDK Unmodified 1047.472 0.47203371 2180 Q10571 MN1 Probable tumor suppressor protein MN1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 2 1 18.477 18.706 2 0.011715 18573 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 53.751 39.976 17461000 0 0 0 0 1052200 1056900 1479200 0 984690 1650200 1873800 2705000 2319000 0 4339900 3328 2180 3039 29051;29052;29053;29054;29055;29056;29057;29058;29059;29060 22921;22922;22923;22924;22925;22926 22924 6 ALVDYTSDSAEK Unmodified 1297.6038 0.60377617 4844 Q9UBK8 MTRR Methionine synthase reductase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 39.463 39.709 2 0.0065461 44110 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 60.434 42.525 89026000 0 0 0 5249400 0 12585000 7113100 5971800 0 10207000 14361000 9628300 6509400 0 17402000 3329 4844 3040 29061;29062;29063;29064;29065;29066;29067;29068;29069 22927;22928;22929;22930;22931;22932 22928 5 ALVEEALAQR Unmodified 1098.6033 0.60332266 4493 Q9HB07 C12orf10 UPF0160 protein MYG1, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 56.364 55.843 2 0.01073 63106 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 82.529 53.612 2885600 0 0 0 0 2885600 0 0 0 0 0 0 0 0 0 0 3330 4493 3041 29070;29071 22933;22934 22933 2 ALVEEEITR Unmodified 1058.5608 0.56078914 234 O14976 GAK Cyclin-G-associated kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.529 45.699 2 0.0029087 50178 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 124.98 82.385 478520000 0 0 0 25885000 32141000 41328000 39058000 39005000 32961000 38268000 53676000 57221000 40058000 36189000 42728000 3331 234 3042 29072;29073;29074;29075;29076;29077;29078;29079;29080;29081;29082;29083 22935;22936;22937;22938;22939;22940;22941;22942;22943;22944;22945 22941 9 ALVEFESNPEETREPGSPPSVQR Unmodified 2554.23 0.22995953 4416 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 yes yes 0 0 1 By MS/MS By matching By matching 10 0 3 1 1 1 65.237 65.293 3 0.027861 75145 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 20.426 17.417 10441000 0 0 0 0 2296700 0 0 0 0 3802000 0 0 0 0 4342500 3332 4416 3043 29084;29085;29086 22946 22946 1 ALVEFTNSPDCLSK Unmodified 1579.7552 0.75520821 4923 Q9UIA9 XPO7 Exportin-7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 74.461 69.435 2 2.2149E-48 84380 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 185.77 175.4 663870000 8027800 650540000 5305700 0 0 0 0 0 0 0 0 0 0 0 0 3333 4923 3044 29087;29088;29089;29090 22947;22948;22949 22947 2 ALVELLR Unmodified 812.51199 0.51198846 3693 Q92974 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.9 70.974 2 0.027168 81355 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 77.748 21.238 117960000 0 0 0 5394300 6077300 9448400 8073100 7394700 6341300 11549000 13575000 16576000 11666000 9397100 12470000 3334 3693 3045 29091;29092;29093;29094;29095;29096;29097;29098;29099;29100;29101;29102 22950;22951;22952 22951 3 ALVEQSQK Unmodified 901.4869 0.48689592 2784 Q5T7V8 GORAB RAB6-interacting golgin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 12.014 9.2349 2 0.017778 12185 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.62 71.86 50528000 0 49053000 1474400 0 0 0 0 0 0 0 0 0 0 0 0 3335 2784 3046 29103;29104;29105 22953;22954 22953 1 ALVERGGVVTSNPLGF Unmodified 1614.873 0.87295558 1591 P49748 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 0 0 1 By MS/MS 2 0 1 1 87.803 79.673 2 0.0014642 103734 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 91.858 80.645 35188000 35188000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3336 1591 3047 29106 22955 22955 0 ALVFQPVAELK Unmodified 1213.7071 0.70705945 861 P08237 PFKM ATP-dependent 6-phosphofructokinase, muscle type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.334 81.394 2 1.9548E-05 94151 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 147.51 131.87 799910000 0 0 0 33158000 44186000 53606000 50531000 53211000 47962000 84113000 90353000 135970000 57474000 65334000 84007000 3337 861 3048 29107;29108;29109;29110;29111;29112;29113;29114;29115;29116;29117;29118 22956;22957;22958;22959;22960;22961;22962;22963;22964;22965;22966 22964 8 ALVFVDNHDNQR Unmodified 1426.6953 0.69532556 785 P19961;P04746;P04745;CON__Q3MHH8 AMY2B;AMY2A;AMY1A Alpha-amylase 2B;Pancreatic alpha-amylase;Alpha-amylase 1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 43.481 43.45 3 0.0055401 47819 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 43.613 30.735 + 30111000 0 0 0 5030100 4418200 0 0 9417700 0 0 0 11245000 0 0 0 3338 785 3049 29119;29120;29121;29122 22967;22968;22969 22968 3 ALVGDFMNR Unmodified 1021.5015 0.50150012 2189 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.124 65.212 2 0.0096665 74733 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.073 36.735 117790000 0 0 0 7447600 7100500 8882000 7849700 8150800 5523200 9769800 9336400 11242000 10920000 10833000 20732000 3339 2189 3050 29123;29124;29125;29126;29127;29128;29129;29130;29131;29132;29133;29134 22970;22971;22972;22973;22974;22975;22976 22970 7 ALVGGAVGGLAGAASK Unmodified 1297.7354 0.73539946 3970 Q96RL7 VPS13A Vacuolar protein sorting-associated protein 13A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.09 63.257 2 1.2627E-07 71345 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 88.021 60.008 123710000 0 0 0 0 7603100 10792000 12178000 11587000 6583900 12475000 10654000 18137000 10917000 10957000 11829000 3340 3970 3051 29135;29136;29137;29138;29139;29140;29141;29142;29143;29144;29145;29146 22977;22978;22979;22980;22981;22982;22983;22984;22985;22986;22987;22988;22989;22990 22985 14 ALVGLVNDESPEIQAQCNK Unmodified 2084.0208 0.020818382 299 O43156 TTI1 TELO2-interacting protein 1 homolog yes yes 0 0 0 By MS/MS 2.5 0.5 2 2 4 76.435 72.238 2;3 0 90309 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 278.27 268.99 186300000 0 186300000 0 0 0 0 0 0 0 0 0 0 0 0 0 3341 299 3052 29147;29148;29149;29150 22991;22992;22993 22991 3 ALVHERDEAAYGELR Unmodified 1727.8591 0.85909643 4987 Q9UL46 PSME2 Proteasome activator complex subunit 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 1 2 2 2 2 2 2 2 2 2 2 39.772 39.98 3;4 1.6378E-41 44455 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 160.8 116.29 955080000 0 0 0 22950000 5332800 113360000 30425000 34728000 40409000 65677000 85202000 120050000 62029000 63198000 311720000 3342 4987 3053 29151;29152;29153;29154;29155;29156;29157;29158;29159;29160;29161;29162;29163;29164;29165;29166;29167;29168;29169;29170;29171;29172;29173 22994;22995;22996;22997;22998;22999;23000;23001;23002;23003;23004;23005;23006;23007;23008;23009;23010;23011;23012;23013;23014;23015;23016 22997 14 ALVHQLSNESR Unmodified 1252.6524 0.65239812 4401 Q9H4L5 OSBPL3 Oxysterol-binding protein-related protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 25.303 25.386 3 0.00016777 27183 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 77.062 68.958 87558000 0 0 0 14227000 10985000 13431000 9442300 4981500 8253400 12750000 4928600 0 8558200 0 0 3343 4401 3054 29174;29175;29176;29177;29178;29179;29180;29181;29182 23017;23018;23019;23020;23021;23022;23023;23024;23025 23020 7 ALVIAQNNIEMAK Oxidation (M) 1429.7599 0.75989966 1143 P22681 CBL E3 ubiquitin-protein ligase CBL yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching 7.86 3.4 1 1 5 2 1 1 1 1 1 57.355 55.982 2 0.0090377 63672 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 61.65 49.784 34779000 0 20250000 0 0 0 0 3014500 3431600 2082300 0 2857300 0 3143200 0 0 3344 1143 3055 29183;29184;29185;29186;29187;29188;29189 23026;23027 23026 1642 1 ALVIAQNNIEMAK Unmodified 1413.765 0.76498503 1143 P22681 CBL E3 ubiquitin-protein ligase CBL yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 67.797 67.217 2 0.0010161 76300 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.533 75.01 45118000 0 24980000 0 1029100 1272500 1637400 0 1821800 0 3198900 3432300 2616600 0 0 5128900 3345 1143 3055 29190;29191;29192;29193;29194;29195;29196;29197;29198 23028;23029;23030 23029 3 ALVIQESER Unmodified 1043.5611 0.56112349 3912 Q96KQ7 EHMT2 Histone-lysine N-methyltransferase EHMT2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 37.424 37.43 2 0.019448 41252 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 53.968 15.835 34661000 0 0 0 10539000 0 0 0 9481200 0 0 0 0 14641000 0 0 3346 3912 3056 29199;29200;29201;29202 23031;23032 23032 2 ALVLAQIR Unmodified 882.56509 0.56508666 624 O95163 IKBKAP Elongator complex protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 64.206 64.328 2 0.020541 72639 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.714 28.976 31303000 0 0 0 2698800 0 3130200 0 2061600 0 3840200 0 5765800 2673900 3678500 7453700 3347 624 3057 29203;29204;29205;29206;29207;29208;29209;29210 23033;23034;23035 23034 3 ALVLGGFAHMDTETK Oxidation (M) 1604.7868 0.78684269 4290 Q9C0E2 XPO4 Exportin-4 yes yes 0 1 0 By MS/MS 2 0 1 1 72.885 64.689 3 0.0027262 85840 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.874 32.538 23798000 23798000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3348 4290 3058 29211 23036 23036 5757 1 ALVLGGFAHMDTETK Unmodified 1588.7919 0.79192807 4290 Q9C0E2 XPO4 Exportin-4 yes yes 0 0 0 By MS/MS 2 0 1 1 82.328 74.198 3 0.00159 97202 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.7 40.67 15464000 15464000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3349 4290 3058 29212 23037 23037 1 ALVLNTPNNPLGK Unmodified 1349.7667 0.76669959 2633 Q16773 CCBL1 Kynurenine--oxoglutarate transaminase 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 6.71 3.81 2 1 4 1 2 1 1 1 1 74.049 71.851 2 0.017755 91829 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.908 52.236 108000000 31660000 59513000 0 0 0 0 0 0 0 0 2214600 2915100 0 2714400 8978400 3350 2633 3059 29213;29214;29215;29216;29217;29218;29219 23038;23039;23040 23040 3 ALVLPSPRPYVR Unmodified 1366.8085 0.80850483 1081 P18858 LIG1 DNA ligase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.975 69.053 3 0.0010269 79287 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 67.153 59.429 101100000 0 0 0 4899700 3216700 12890000 6277000 8179700 8014500 7345100 7366300 9189900 5610600 5850400 22263000 3351 1081 3060 29220;29221;29222;29223;29224;29225;29226;29227;29228;29229;29230;29231 23041;23042;23043;23044;23045;23046;23047;23048;23049;23050;23051 23041 11 ALVLSCK Unmodified 789.44186 0.44185998 422 O60671 RAD1 Cell cycle checkpoint protein RAD1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 38.729 32.934 2 0.032088 42944 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.866 38.693 52232000 29452000 22779000 0 0 0 0 0 0 0 0 0 0 0 0 0 3352 422 3061 29232;29233 23052 23052 1 ALVLTEIGPK Unmodified 1039.6277 0.6277465 205 O14732 IMPA2 Inositol monophosphatase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.18 3.74 3 1 7 1 2 1 1 1 1 1 1 1 1 74.649 72.728 2 0.00075957 87947 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 114.89 87.37 800730000 111310000 454860000 107620000 28901000 5383600 0 0 0 4997100 14464000 28296000 0 0 0 44890000 3353 205 3062 29234;29235;29236;29237;29238;29239;29240;29241;29242;29243;29244 23053;23054;23055;23056;23057;23058;23059;23060;23061;23062;23063;23064;23065;23066;23067 23059 15 ALVMLLEVR Oxidation (M) 1058.6158 0.6158016 3692;215 Q92973;O14787 TNPO1;TNPO2 Transportin-1;Transportin-2 no no 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 81.281 81.345 2 0.0033673 94167 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 83.265 65.879 14748000 0 0 0 0 0 3350500 0 0 0 6390700 0 0 5007000 0 0 3354 3692;215 3063 29245;29246;29247 23068;23069 23068 291 2 ALVNHSGLSAPVPR Unmodified 1416.7837 0.78374664 4814 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.572 49.728 3 0.0018348 56377 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 49.62 41.586 258780000 0 0 0 19711000 16549000 19566000 17657000 14801000 15291000 17217000 23581000 38947000 29037000 18598000 27824000 3355 4814 3064 29248;29249;29250;29251;29252;29253;29254;29255;29256;29257;29258;29259 23070;23071;23072;23073;23074;23075;23076 23070 7 ALVNTTGYQNDSPLHDAAK Unmodified 2013.9756 0.97558275 4055 Q99728 BARD1 BRCA1-associated RING domain protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 63.064 57.171 3 1.0875E-09 73382 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.723 72.722 15334000 0 15334000 0 0 0 0 0 0 0 0 0 0 0 0 0 3356 4055 3065 29260 23077 23077 1 ALVPDSVK Unmodified 827.47527 0.4752686 4544 Q9NPA8 ENY2 Transcription and mRNA export factor ENY2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 38.276 38.472 2 0.01524 43417 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 69.198 26.969 192700000 0 0 0 13854000 19556000 14071000 0 16250000 0 18244000 25508000 15394000 19969000 25344000 24514000 3357 4544 3066 29261;29262;29263;29264;29265;29266;29267;29268;29269;29270 23078;23079;23080 23080 3 ALVPMFVR Unmodified 931.53134 0.53134369 1039 P16435 POR NADPH--cytochrome P450 reductase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 79.451 79.582 2 0.018028 91588 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.776 42.645 17767000 0 0 0 0 0 2163400 0 0 0 3235100 3624700 0 0 3496600 5247500 3358 1039 3067 29271;29272;29273;29274;29275 23081;23082;23083;23084 23083 4 ALVPMFVR Oxidation (M) 947.52626 0.52625831 1039 P16435 POR NADPH--cytochrome P450 reductase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 70.871 70.882 2 0.030005 81586 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 48.504 29.773 42765000 0 0 0 3894400 4361900 5865400 0 0 0 5733800 7114900 9670200 0 0 6124400 3359 1039 3067 29276;29277;29278;29279;29280;29281;29282 23085 23085 1 ALVPYEETTEFGLQK Acetyl (Protein N-term) 1765.8774 0.87743183 3584 Q8WXB1 METTL21A Protein N-lysine methyltransferase METTL21A yes yes 1 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 90.514 90.663 2 0.00090317 104962 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.094 48.528 5175700 0 0 0 0 0 0 0 0 0 0 1476400 0 0 962020 2737200 3360 3584 3068 29283;29284;29285 23086 23086 1 ALVQLPR Unmodified 795.49667 0.49667274 3686 Q92917 GPKOW G patch domain and KOW motifs-containing protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 2 1 1 1 1 55.264 55.299 2 0.017078 62511 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 114.67 52.67 262240000 0 0 0 0 39889000 33868000 0 0 0 54616000 74407000 59459000 0 0 0 3361 3686 3069 29286;29287;29288;29289;29290;29291 23087;23088;23089;23090;23091 23088 5 ALVQNDTLLQVK Unmodified 1340.7664 0.76636524 3612 Q92522 H1FX Histone H1x yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 70.754 70.205 2 3.2654E-06 80781 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 111.46 81.982 221840000 0 115940000 0 4281700 8527300 9669500 7272500 5798100 6805200 11292000 11293000 13010000 7084300 8530400 12333000 3362 3612 3070 29292;29293;29294;29295;29296;29297;29298;29299;29300;29301;29302;29303;29304;29305 23092;23093;23094;23095;23096;23097;23098;23099;23100;23101;23102;23103;23104;23105;23106;23107 23092 16 ALVQSLLAK Unmodified 941.59097 0.59096706 4715 Q9NX46 ADPRHL2 Poly(ADP-ribose) glycohydrolase ARH3 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 68.552 68.592 2 0.024299 77722 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.703 31.973 18977000 0 0 0 2590000 0 0 0 0 0 2192400 0 0 0 3176500 11019000 3363 4715 3071 29306;29307;29308;29309 23108;23109 23108 2 ALVRESEGFEEHVPSDNS Unmodified 2000.9076 0.90756276 1904 P62699 YPEL5 Protein yippee-like 5 yes yes 0 0 1 By MS/MS 2 0 1 1 54.767 50.87 3 0.019187 63681 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 20.949 19.257 13465000 0 0 13465000 0 0 0 0 0 0 0 0 0 0 0 0 3364 1904 3072 29310 23110 23110 1 ALVSEEGEGK Unmodified 1017.4979 0.49785453 2330 Q13618 CUL3 Cullin-3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18.776 18.33 2 0.00039375 22629 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.89 83.082 237420000 13661000 164580000 0 3061400 3106700 6568300 3802900 4711200 2752100 6007400 5683600 5625700 4886900 5100400 7870300 3365 2330 3073 29311;29312;29313;29314;29315;29316;29317;29318;29319;29320;29321;29322;29323;29324 23111;23112;23113;23114;23115;23116;23117;23118;23119;23120;23121 23114 11 ALVSEWK Unmodified 831.44905 0.44905385 2608 Q16531 DDB1 DNA damage-binding protein 1 yes yes 0 0 0 By matching By MS/MS 2.67 0.471 1 2 1 2 52.145 46.781 2 0.036349 60900 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.614 47.027 334960000 161490 334800000 0 0 0 0 0 0 0 0 0 0 0 0 0 3366 2608 3074 29325;29326;29327 23122;23123 23122 2 ALVSEWKEPQAK Unmodified 1384.7351 0.73506511 2608 Q16531 DDB1 DNA damage-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 6.57 3.96 3 4 1 1 1 1 1 1 1 50.378 47.747 3 0.0010805 53452 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 66.498 48.903 101790000 44694000 8365500 12252000 10173000 5222300 0 0 0 0 4483100 16603000 0 0 0 0 3367 2608 3075 29328;29329;29330;29331;29332;29333;29334 23124;23125;23126;23127;23128;23129;23130 23130 6 ALVTLSSGDMR Unmodified 1148.586 0.58595803 1424 P40937 RFC5 Replication factor C subunit 5 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 10 1 1 1 2 1 1 1 1 1 57.498 57.553 2 0.00028549 64963 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 108.98 58.851 31968000 0 0 0 3737200 4632800 0 0 0 0 3281500 0 9816500 0 4310000 6190000 3368 1424 3076 29335;29336;29337;29338;29339;29340;29341;29342;29343;29344 23131;23132;23133;23134;23135;23136 23135 6 ALVTLSSGDMRR Unmodified 1304.6871 0.68706906 1424 P40937 RFC5 Replication factor C subunit 5 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 47.726 48.127 3 0.0020869 54356 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 51.286 35.033 45148000 0 0 0 0 0 0 0 5851800 0 5055200 6919300 9502800 5947800 4841400 7030000 3369 1424 3077 29345;29346;29347;29348;29349;29350;29351 23137;23138;23139;23140;23141 23138 5 ALVVPEPEPDSDSNQER Unmodified 1880.8752 0.8752 2816 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 56.887 56.714 2 0.00026735 64274 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 78.096 64.19 39737000 0 0 0 7510900 7516400 5236800 10814000 8659700 0 0 0 0 0 0 0 3370 2816 3078 29352;29353;29354;29355;29356 23142;23143;23144;23145 23143 3 ALVVPEPEPDSDSNQERK Unmodified 2008.9702 0.97016302 2816 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 1 1 1 1 1 1 1 1 1 1 1 1 49.443 48.498 3 3.6087E-06 54821 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 73.983 69.274 125400000 7811700 2663300 0 8004100 0 13876000 6465400 7175600 9799500 11828000 11985000 0 14786000 14149000 16853000 3371 2816 3079 29357;29358;29359;29360;29361;29362;29363;29364;29365;29366;29367;29368 23146;23147;23148;23149;23150;23151;23152;23153;23154;23155;23156;23157;23158 23147 13 ALWAASR Unmodified 773.41842 0.41842242 3946 Q96P70 IPO9 Importin-9 yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 38.047 38.228 2 0.032282 40815 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.039 46.93 72695000 0 0 0 2980400 2420600 7951700 3207400 0 1760400 7728900 9222000 7964700 6070900 9267900 14120000 3372 3946 3080 29369;29370;29371;29372;29373;29374;29375;29376;29377;29378;29379 23159 23159 1 ALWCSEDK Unmodified 1007.4382 0.43823117 5167 Q9Y3F4 STRAP Serine-threonine kinase receptor-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 41.279 36.148 2 0.012113 47067 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.28 90.468 418450000 33204000 379810000 5430900 0 0 0 0 0 0 0 0 0 0 0 0 3373 5167 3081 29380;29381;29382 23160;23161;23162 23161 3 ALWEDEGVR Unmodified 1073.5142 0.5141733 1938 P63092;Q5JWF2 GNAS Guanine nucleotide-binding protein G(s) subunit alpha isoforms short;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 53.683 53.447 2 0.024533 60444 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 50.607 25.684 24737000 0 0 0 5600600 4041000 0 4919400 10176000 0 0 0 0 0 0 0 3374 1938 3082 29383;29384;29385;29386 23163 23163 1 ALWFQGR Unmodified 876.46062 0.46062159 1473 P43243 MATR3 Matrin-3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.301 65.389 2 0.023328 73988 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 91.093 56.201 727520000 0 0 0 35836000 39834000 52666000 47689000 73291000 44300000 54791000 60116000 85362000 70461000 62028000 101150000 3375 1473 3083 29387;29388;29389;29390;29391;29392;29393;29394;29395;29396;29397;29398 23164;23165;23166 23166 3 ALWLAENQAQPMLR Unmodified 1639.8504 0.850446 2381 Q14160 SCRIB Protein scribble homolog yes yes 0 0 0 By MS/MS 10 0 1 1 81.746 81.948 2 0.0034731 94510 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.542 45.384 4640000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4640000 3376 2381 3084 29399 23167 23167 1 ALWNNALAAK Unmodified 1070.5873 0.58727866 3024 Q70CQ2 USP34 Ubiquitin carboxyl-terminal hydrolase 34 yes yes 0 0 0 By MS/MS 2 0 1 1 75.153 67.022 2 0.0086386 88481 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.923 48.546 8290300 8290300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3377 3024 3085 29400 23168 23168 1 ALYAYDAQDTDELSFNANDIIDIIK Unmodified 2830.3549 0.35488528 2215 Q12965 MYO1E Unconventional myosin-Ie yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 2 1 1 1 1 99.069 94.433 3 0.00024753 117928 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.281 40.721 55934000 51568000 2326900 2039500 0 0 0 0 0 0 0 0 0 0 0 0 3378 2215 3086 29401;29402;29403 23169;23170;23171 23170 2 ALYDAELSQMQTHISDTSVVLSMDNNR 2 Oxidation (M) 3069.4019 0.4019286 66;58;779 P04259;CON__P02538;P02538;CON__P04259 KRT6B;KRT6A Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 6A no no 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 76.333 76.41 3 5.9113E-51 88011 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 102.97 68.087 + 124760000 0 0 0 19303000 0 0 6223800 15846000 8855500 27260000 14421000 17132000 15714000 0 0 3379 779;58;66 3087 29404;29405;29406;29407;29408;29409;29410;29411 23172;23173;23174;23175;23176;23177;23178;23179;23180 23176 63;64 9 ALYDFEPENEGELGFK Unmodified 1856.8469 0.84685999 4075 Q99962 SH3GL2 Endophilin-A1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 7.18 3.74 3 1 7 1 2 1 1 1 1 1 1 1 1 84.459 82.776 2 1.6373E-05 102550 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.56 114.37 110910000 11332000 73553000 2332900 832180 1501500 4682100 0 2693900 0 0 4223300 0 0 4286100 5470800 3380 4075 3088 29412;29413;29414;29415;29416;29417;29418;29419;29420;29421;29422 23181;23182;23183;23184;23185 23182 5 ALYDFEVK Unmodified 983.4964 0.49639797 3112 Q7Z6J0 SH3RF1 E3 ubiquitin-protein ligase SH3RF1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.055 67.139 2 0.028761 76928 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 56.547 28.124 94236000 0 0 0 5231100 4429700 5612400 7612100 6669700 5966300 9423300 9722900 10768000 7634100 7716600 13450000 3381 3112 3089 29423;29424;29425;29426;29427;29428;29429;29430;29431;29432;29433;29434 23186 23186 1 ALYDNVAESPDELSFRK Unmodified 1952.948 0.94797101 1788 P56945 BCAR1 Breast cancer anti-estrogen resistance protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 72.263 71.911 3 0.0016881 82745 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 39.657 34.839 43233000 0 0 14658000 0 0 6730700 4084700 5017800 5055600 0 7686100 0 0 0 0 3382 1788 3090 29435;29436;29437;29438;29439;29440;29441;29442;29443 23187;23188;23189;23190;23191;23192;23193;23194;23195 23187 8 ALYDVGDIVHSVR Unmodified 1442.7518 0.75177781 5193 Q9Y4C1 KDM3A Lysine-specific demethylase 3A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 77.456 77.565 3 0.00051717 89086 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.487 50.452 76288000 0 0 0 0 4285600 8843500 4535900 6197200 7548300 0 8596000 9550600 0 6454400 20276000 3383 5193 3091 29444;29445;29446;29447;29448;29449;29450;29451;29452;29453 23196;23197;23198;23199;23200;23201;23202;23203;23204;23205 23198 10 ALYDYEGQEHDELSFK Unmodified 1942.8585 0.85848731 5030 Q9UNF0 PACSIN2 Protein kinase C and casein kinase substrate in neurons protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.12 3.89 3 1 4 1 2 1 1 1 1 1 71.562 69.172 3 0.0022758 78673 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.567 42.918 85683000 13275000 46372000 4179200 0 0 2853300 0 0 0 3917000 0 4399100 0 0 10687000 3384 5030 3092 29454;29455;29456;29457;29458;29459;29460;29461 23206;23207;23208;23209;23210 23207 5 ALYEAGER Unmodified 907.43995 0.43994572 773 P04083 ANXA1 Annexin A1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 22.476 22.673 2 0.011863 22541 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 117.93 69.76 408320000 0 0 0 32119000 12951000 0 28825000 37664000 14936000 26192000 0 63385000 32738000 48618000 110890000 3385 773 3093 29462;29463;29464;29465;29466;29467;29468;29469;29470;29471 23211;23212 23212 1 ALYEALK Unmodified 806.4538 0.45380487 509 O75496 GMNN Geminin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 43.979 43.764 2 0.024035 48997 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 83.614 30.931 408500000 0 11659000 0 20756000 23905000 26929000 26013000 27301000 24206000 31933000 49421000 59458000 31505000 25415000 50000000 3386 509 3094 29472;29473;29474;29475;29476;29477;29478;29479;29480;29481;29482;29483;29484 23213;23214;23215;23216;23217;23218;23219;23220;23221;23222 23218 10 ALYEDVILQPGTQEALK Unmodified 1886.9989 0.99894395 3915 Q96L91 EP400 E1A-binding protein p400 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 82.189 81.878 2 3.6697E-47 101083 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 139.78 107.77 126180000 0 58792000 0 1634500 4966000 6003500 3248800 6416200 5091100 9620900 6537900 6601500 3327800 5100100 8842600 3387 3915 3095 29485;29486;29487;29488;29489;29490;29491;29492;29493;29494;29495;29496;29497 23223;23224;23225;23226;23227;23228;23229;23230;23231;23232;23233;23234;23235 23227 13 ALYEHLTAK Unmodified 1044.5604 0.56039521 1464 P42704 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 41.234 36.063 2 0.00056927 50065 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 123.16 75.12 248530000 221190000 0 27346000 0 0 0 0 0 0 0 0 0 0 0 0 3388 1464 3096 29498;29499 23236 23236 1 ALYEQNQSDVNEAK Unmodified 1607.7427 0.74272927 2436 Q14691 GINS1 DNA replication complex GINS protein PSF1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 6.25 3.77 1 1 2 2 1 1 31.483 29.497 2 8.1462E-15 37291 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.03 110.13 58302000 0 36849000 0 0 0 0 0 0 0 0 9363300 12091000 0 0 0 3389 2436 3097 29500;29501;29502;29503 23237;23238;23239;23240 23237 4 ALYEQSLHIK Unmodified 1200.6503 0.65027285 1838 P61201 COPS2 COP9 signalosome complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 6 2 22 3 2 3 1 2 2 2 2 2 2 2 1 2 2 2 51.666 50.316 2;3 0.00037671 64110 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 144.12 97.04 2440900000 1304600000 92343000 470650000 19622000 25557000 44303000 34265000 41588000 26837000 57441000 68685000 40019000 48263000 52877000 113830000 3390 1838 3098 29504;29505;29506;29507;29508;29509;29510;29511;29512;29513;29514;29515;29516;29517;29518;29519;29520;29521;29522;29523;29524;29525;29526;29527;29528;29529;29530;29531;29532;29533 23241;23242;23243;23244;23245;23246;23247;23248;23249;23250;23251;23252;23253;23254;23255;23256;23257;23258;23259;23260;23261;23262;23263;23264;23265 23260 20 ALYETELADAR Unmodified 1250.6143 0.61428128 1111 P20700 LMNB1 Lamin-B1 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 56.018 56.034 2 0.0027466 63866 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 79.148 31.574 14936000 0 0 0 3218500 0 0 3356300 0 0 0 5011600 0 3349200 0 0 3391 1111 3099 29534;29535;29536;29537;29538 23266;23267;23268 23268 3 ALYETELADARR Unmodified 1406.7154 0.7153923 1111 P20700 LMNB1 Lamin-B1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 2 1 1 1 1 1 1 1 48.664 48.901 3 3.5141E-05 54649 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.165 56.424 137790000 0 0 0 0 7996900 0 0 15824000 6932700 15594000 0 32741000 16002000 15470000 27230000 3392 1111 3100 29539;29540;29541;29542;29543;29544;29545;29546;29547;29548 23269;23270;23271;23272;23273;23274;23275;23276;23277;23278;23279 23278 11 ALYFITPTSK Unmodified 1139.6227 0.62266112 125 O00186 STXBP3 Syntaxin-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 73.632 73.067 2 0.0019539 84216 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 97.431 63.915 96523000 17928000 0 0 4682100 4970000 7163500 6552500 7452400 5614600 7204600 6751000 7810000 6954600 6082800 7356900 3393 125 3101 29549;29550;29551;29552;29553;29554;29555;29556;29557;29558;29559;29560;29561 23280;23281;23282;23283;23284;23285;23286;23287;23288;23289;23290;23291;23292 23286 13 ALYLIATNGTPELQNPEK Unmodified 1971.0313 0.031306714 2248 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.626 80.685 2 2.1172E-37 93380 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 127.56 119.83 194580000 0 0 0 5250100 7475800 21545000 12233000 7802700 10569000 26589000 17248000 27255000 10524000 15367000 32724000 3394 2248 3102 29562;29563;29564;29565;29566;29567;29568;29569;29570;29571;29572;29573 23293;23294;23295;23296;23297;23298;23299 23295 7 ALYNYEGK Unmodified 956.46035 0.46034682 3112 Q7Z6J0 SH3RF1 E3 ubiquitin-protein ligase SH3RF1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 33.163 32.699 2 0.022664 34791 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 60.972 24.416 65096000 0 16741000 0 3738400 3563300 0 0 4786700 5357500 9166600 7536400 0 8256300 5950200 0 3395 3112 3103 29574;29575;29576;29577;29578;29579;29580;29581;29582 23300;23301;23302;23303;23304;23305;23306;23307 23304 8 ALYTFEGQNEGTISVVEGETLYVIEEDK Unmodified 3132.5027 0.50267173 3979 Q96RU3 FNBP1 Formin-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 97.161 91.659 3 1.0094E-21 116822 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.528 64.951 31718000 12045000 19673000 0 0 0 0 0 0 0 0 0 0 0 0 0 3396 3979 3104 29583;29584;29585 23308;23309 23309 1 ALYTLSGETEELSR Unmodified 1567.773 0.77296676 4801 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 69.829 69.806 2 0.0003597 80479 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 94.767 82.561 42995000 0 0 0 2644100 4961100 0 6594600 4861900 0 8027000 0 10155000 5751200 0 0 3397 4801 3105 29586;29587;29588;29589;29590;29591;29592 23310;23311;23312;23313;23314;23315 23313 6 ALYYLQIHPQELR Unmodified 1642.8831 0.88312633 2608 Q16531 DDB1 DNA damage-binding protein 1 yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 77.862 78.022 3 0.00033787 89650 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.892 77.734 47721000 0 0 0 0 0 3531100 0 2850100 0 0 2884200 5567600 0 5020200 27867000 3398 2608 3106 29593;29594;29595;29596;29597;29598 23316;23317 23316 2 AMAAEAEASR Unmodified 1005.4549 0.45494386 1213 P27105 STOM Erythrocyte band 7 integral membrane protein yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 14.296 14.379 2 0.019183 12922 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 47.96 17.347 8051300 0 0 0 1476100 0 0 930420 1065900 0 2432100 0 0 0 2146800 0 3399 1213 3107 29599;29600;29601;29602;29603 23318 23318 1 AMAAPESGLEVR Oxidation (M) 1245.6023 0.60233638 198 O14641 DVL2 Segment polarity protein dishevelled homolog DVL-2 yes yes 0 1 0 By MS/MS By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 38.287 38.507 2 0.0065097 41520 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.187 28.515 19396000 0 0 0 0 2895700 2348300 0 0 0 0 3664400 0 5905100 0 4582500 3400 198 3108 29604;29605;29606;29607;29608 23319 23319 268 1 AMAAPESGLEVR Unmodified 1229.6074 0.60742176 198 O14641 DVL2 Segment polarity protein dishevelled homolog DVL-2 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 49.29 49.733 2 0.0062845 55329 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.528 32.434 16551000 0 0 0 0 0 0 0 0 0 6350100 0 0 0 0 10201000 3401 198 3108 29609;29610 23320 23320 1 AMADPEVQQIMSDPAMR 3 Oxidation (M) 1936.8329 0.83288296 1313 P31948 STIP1 Stress-induced-phosphoprotein 1 yes yes 0 3 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 2 2 2 2 46.691 47.078 2 2.9147E-32 52438 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 123.95 118.22 58175000 0 0 0 0 2200800 0 2774200 0 0 0 12382000 14374000 0 9135100 17309000 3402 1313 3109 29611;29612;29613;29614;29615;29616;29617;29618;29619;29620 23321;23322;23323;23324 23321 1951;1952;1953 4 AMADPEVQQIMSDPAMR Oxidation (M) 1904.8431 0.84305371 1313 P31948 STIP1 Stress-induced-phosphoprotein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 4 1 1 2 74.091 74.362 2 1.6107E-29 84188 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 117.7 109.3 61032000 0 0 0 0 0 0 0 0 0 0 10416000 0 0 8238900 42377000 3403 1313 3109 29621;29622;29623;29624 23325;23326;23327;23328 23325 1951;1952;1953 1 AMADPEVQQIMSDPAMR Unmodified 1888.8481 0.84813909 1313 P31948 STIP1 Stress-induced-phosphoprotein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 78.902 79.086 2 9.2204E-144 91015 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 207.66 190.72 63818000 0 0 0 0 0 0 0 1549700 0 0 7692100 5194600 0 6485700 42896000 3404 1313 3109 29625;29626;29627;29628;29629 23329;23330;23331;23332 23329 4 AMADPEVQQIMSDPAMR 2 Oxidation (M) 1920.838 0.83796833 1313 P31948 STIP1 Stress-induced-phosphoprotein 1 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 65.694 66.065 2 1.8306E-25 74699 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 107.85 101.61 36862000 0 0 0 0 0 0 0 0 0 0 9012300 9532500 0 5541900 12776000 3405 1313 3109 29630;29631;29632;29633 23333;23334;23335 23334 1951;1952;1953 3 AMAEDLGDQDK Oxidation (M) 1207.5027 0.50268192 3618 Q92541 RTF1 RNA polymerase-associated protein RTF1 homolog yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.723 14.89 2 0.00096063 14351 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 72.607 61.897 78954000 0 0 0 3100000 3664700 5567100 6776200 3527000 5894200 6873400 6870000 8809600 10837000 6666200 10369000 3406 3618 3110 29634;29635;29636;29637;29638;29639;29640;29641;29642;29643;29644;29645 23336;23337;23338;23339;23340;23341;23342 23342 5119 7 AMAEDLGDQDK Unmodified 1191.5078 0.50776729 3618 Q92541 RTF1 RNA polymerase-associated protein RTF1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26.252 25.716 2 2.0093E-05 27488 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 131.44 117.44 138870000 5801200 21171000 0 4462800 4631000 7149700 8490200 7462600 5516800 12090000 14706000 12893000 14978000 8137000 11381000 3407 3618 3110 29646;29647;29648;29649;29650;29651;29652;29653;29654;29655;29656;29657;29658;29659 23343;23344;23345;23346;23347;23348;23349;23350;23351;23352;23353;23354;23355;23356;23357 23350 14 AMAEGERTECAEPPRDEPPADGALK Acetyl (Protein N-term);Oxidation (M) 2754.2225 0.22250767 1709 P53041 PPP5C Serine/threonine-protein phosphatase 5 yes yes 1 1 2 By MS/MS By MS/MS By matching 2 0 3 1 1 1 51.647 45.746 3 2.2641E-08 59583 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.72 67.108 36252000 10978000 22677000 2596600 0 0 0 0 0 0 0 0 0 0 0 0 3408 1709 3111 29660;29661;29662 23358;23359;23360 23359 2761 3 AMAEGERTECAEPPRDEPPADGALK Acetyl (Protein N-term) 2738.2276 0.22759305 1709 P53041 PPP5C Serine/threonine-protein phosphatase 5 yes yes 1 0 2 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 60.14 53.097 3 3.4386E-92 68855 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.35 114.24 37779000 5915800 31863000 0 0 0 0 0 0 0 0 0 0 0 0 0 3409 1709 3111 29663;29664;29665 23361;23362;23363;23364 23362 4 AMAPLHPHPAGMR Unmodified 1384.6856 0.68562927 4243 Q9BY77 POLDIP3 Polymerase delta-interacting protein 3 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 31.463 32.052 3 0.0059323 33621 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.991 38.528 17860000 0 0 0 0 0 0 0 0 0 0 5043900 0 0 0 12816000 3410 4243 3112 29666;29667 23365 23365 1 AMAPQQGLLDK Unmodified 1170.6067 0.60669348 2834 Q5VZL5 ZMYM4 Zinc finger MYM-type protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 47.002 47.34 2 0.00034842 53152 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 88.37 68.593 120410000 0 0 0 0 0 13099000 12948000 13374000 0 20351000 12825000 17853000 14683000 0 15274000 3411 2834 3113 29668;29669;29670;29671;29672;29673;29674;29675 23366;23367;23368;23369;23370;23371;23372;23373 23372 8 AMAQTAIK Oxidation (M) 848.44259 0.44258826 3677 Q92879 CELF1 CUGBP Elav-like family member 1 yes yes 0 1 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 8.5328 8.6673 2 0.021491 6796 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 54.205 17.046 55396000 0 0 0 2156000 2904700 2180100 3782900 3927800 2553200 4585700 9280800 7506200 6796600 4483500 5238900 3412 3677 3114 29676;29677;29678;29679;29680;29681;29682;29683;29684;29685;29686;29687 23374;23375;23376;23377;23378;23379 23374 6 AMAQTAIK Unmodified 832.44767 0.44767364 3677 Q92879 CELF1 CUGBP Elav-like family member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 18.018 18.197 2 0.0090656 18190 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 84.097 30.543 136670000 0 0 0 5510000 7038500 7331100 9750100 14799000 7209600 13898000 16461000 16878000 15903000 0 21895000 3413 3677 3114 29688;29689;29690;29691;29692;29693;29694;29695;29696;29697;29698 23380;23381;23382 23382 3 AMCNETTSFEK Unmodified 1316.5377 0.53768721 3018 Q6ZV73 FGD6 FYVE, RhoGEF and PH domain-containing protein 6 yes yes 0 0 0 By MS/MS 2 0 1 1 35.46 30.613 2 0.042682 40178 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 57.108 50.955 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3414 3018 3115 29699 23383 23383 1 AMDEIQPDLR Oxidation (M) 1202.5601 0.56013721 4952 Q9UK41 VPS28 Vacuolar protein sorting-associated protein 28 homolog yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.563 41.74 2 0.0011262 45409 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.85 75.579 82866000 0 0 0 6126300 4664800 5205200 6023300 6554400 3555700 8384600 8154700 11118000 9783500 5438600 7857100 3415 4952 3116 29700;29701;29702;29703;29704;29705;29706;29707;29708;29709;29710;29711 23384;23385;23386;23387;23388;23389;23390;23391;23392;23393;23394;23395 23387 6296 12 AMDEIQPDLR Unmodified 1186.5652 0.56522259 4952 Q9UK41 VPS28 Vacuolar protein sorting-associated protein 28 homolog yes yes 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 52.977 53.009 2 0.003008 58723 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.06 65.084 39204000 0 0 0 3201700 2779600 0 3273900 3946500 0 0 0 0 6159400 4010000 15833000 3416 4952 3116 29712;29713;29714;29715;29716;29717;29718 23396 23396 1 AMDEMNGK Unmodified 894.35754 0.357538 322 O43390 HNRNPR Heterogeneous nuclear ribonucleoprotein R yes yes 0 0 0 By MS/MS 2 0 1 1 12.042 8.7633 2 0.020792 11926 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.359 68.066 35238000 0 35238000 0 0 0 0 0 0 0 0 0 0 0 0 0 3417 322 3117 29719 23397 23397 1 AMDEMNGK 2 Oxidation (M) 926.34737 0.34736725 322 O43390 HNRNPR Heterogeneous nuclear ribonucleoprotein R yes yes 0 2 0 By MS/MS 1 0 1 1 106.63 111.9 2 0.055121 92625 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 61.357 53.417 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3418 322 3117 29720 23398 23398 1 AMDISAMPR Unmodified 990.46267 0.46267178 2759 Q5SW79 CEP170 Centrosomal protein of 170 kDa yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 51.836 52.009 2 0.043067 58949 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 43.769 29.845 33308000 0 0 0 0 2797100 5203700 2540900 0 0 4394400 4276000 0 3568100 3658900 6868600 3419 2759 3118 29721;29722;29723;29724;29725;29726;29727;29728 23399 23399 1 AMDPAVPNMMIDAAK 2 Oxidation (M) 1605.7201 0.72008503 417 O60610 DIAPH1 Protein diaphanous homolog 1 yes yes 0 2 0 By MS/MS By matching 10 0 2 1 1 62.602 62.77 2 0.00042373 71802 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 55.426 47.78 9968600 0 0 0 0 0 5764300 0 0 0 0 4204300 0 0 0 0 3420 417 3119 29729;29730 23400 23400 516;517 1 AMDPAVPNMMIDAAK Oxidation (M) 1589.7252 0.72517041 417 O60610 DIAPH1 Protein diaphanous homolog 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 74.415 74.069 2 0.00033778 85366 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 63.864 57.76 114400000 0 52349000 0 5171400 3639600 8125300 4989500 4166100 2252700 6842900 6840100 7087500 4222500 0 8711000 3421 417 3119 29731;29732;29733;29734;29735;29736;29737;29738;29739;29740;29741;29742 23401;23402;23403;23404;23405;23406;23407;23408;23409 23401 516;517 9 AMDPAVPNMMIDAAK Unmodified 1573.7303 0.73025579 417 O60610 DIAPH1 Protein diaphanous homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 78.947 79.104 2 0.00086583 91444 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 61.11 46.952 43676000 0 0 0 0 0 0 0 5915200 0 5785100 5802300 6107600 3023700 5038000 12004000 3422 417 3119 29743;29744;29745;29746;29747;29748;29749 23410;23411;23412;23413;23414 23410 5 AMDPQDLQNTEVPIATTAK Oxidation (M) 2057.9939 0.99393493 4370 Q9H2M9 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 63.98 64.098 2 3.1142E-38 72491 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 112.15 107.08 60710000 0 0 0 0 3585900 9113400 5753200 5193200 0 7909900 7936100 8177700 7700300 5340300 0 3423 4370 3120 29750;29751;29752;29753;29754;29755;29756;29757;29758;29759 23415;23416;23417;23418;23419;23420;23421;23422;23423 23420 5827 9 AMDPQDLQNTEVPIATTAK Unmodified 2041.999 0.99902031 4370 Q9H2M9 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 73.662 73.728 2 3.3466E-06 84930 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 73.722 63.67 50992000 0 0 0 0 4460600 6934500 0 6111300 3364700 8936000 9054900 0 5048900 7081000 0 3424 4370 3120 29760;29761;29762;29763;29764;29765;29766;29767;29768;29769 23424;23425;23426;23427;23428;23429;23430;23431 23428 7 AMDQEITVNPQFVQK Oxidation (M) 1762.856 0.85598488 5042 Q9UNS2 COPS3 COP9 signalosome complex subunit 3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 65.299 63.82 2;3 7.8061E-73 80392 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 199.12 151.56 417900000 8053600 204670000 0 10909000 9612600 21198000 13739000 8797300 8517300 16704000 23203000 28463000 19410000 20845000 23781000 3425 5042 3121 29770;29771;29772;29773;29774;29775;29776;29777;29778;29779;29780;29781;29782;29783;29784;29785 23432;23433;23434;23435;23436;23437;23438;23439;23440;23441;23442;23443;23444;23445;23446;23447 23435 6388 15 AMDQEITVNPQFVQK Unmodified 1746.8611 0.86107026 5042 Q9UNS2 COPS3 COP9 signalosome complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 1 4 1 1 1 1 1 1 1 1 1 1 1 1 72.492 71.051 2;3 1.3134E-22 88112 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 153.34 137.97 487420000 8482100 345710000 0 4095100 5419100 12329000 7473600 8477700 5970200 13311000 13740000 14500000 8550300 14662000 24699000 3426 5042 3121 29786;29787;29788;29789;29790;29791;29792;29793;29794;29795;29796;29797;29798;29799;29800;29801;29802 23448;23449;23450;23451;23452;23453;23454;23455;23456;23457;23458;23459;23460;23461;23462;23463;23464;23465 23452 17 AMDQVNALCEQLVK Acetyl (Protein N-term);Oxidation (M) 1675.7909 0.79094179 4491 Q9HAV4 XPO5 Exportin-5 yes yes 1 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 82.122 82.213 2 3.4288E-05 95133 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 79.82 63.93 20538000 0 0 0 0 0 3432000 0 0 0 4456400 0 7364800 2585400 2699700 0 3427 4491 3122 29803;29804;29805;29806;29807 23466;23467;23468;23469 23466 5922 4 AMDSSLQAR Acetyl (Protein N-term) 1019.4706 0.47059393 4043 Q99661 KIF2C Kinesin-like protein KIF2C yes yes 1 0 0 By MS/MS 10 0 1 1 41.954 42.697 2 0.01622 46731 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.075 29.881 4179600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4179600 3428 4043 3123 29808 23470 23470 1 AMDVLPILK Oxidation (M) 1014.5784 0.57835346 566 O75962 TRIO Triple functional domain protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 76.09 75.362 2 0.024972 86779 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 45.081 22.152 58191000 0 29690000 2073200 2465800 2665100 3048300 2853100 0 2846900 4702600 3938000 0 0 0 3907900 3429 566 3124 29809;29810;29811;29812;29813;29814;29815;29816;29817;29818 23471;23472 23471 2 AMDVYQK Oxidation (M) 869.3953 0.39530372 1313 P31948 STIP1 Stress-induced-phosphoprotein 1 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 8.9643 8.2497 2 0.026941 11111 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.986 51.767 209290000 26661000 156580000 0 1042500 1048400 0 1214500 0 0 1033200 0 6696100 0 5189200 9823700 3430 1313 3125 29819;29820;29821;29822;29823;29824;29825;29826;29827 23473;23474;23475 23474 3 AMDVYQK Unmodified 853.40039 0.4003891 1313 P31948 STIP1 Stress-induced-phosphoprotein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 22.757 18.732 2 0.02411 25093 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.29 56.915 808980000 0 808980000 0 0 0 0 0 0 0 0 0 0 0 0 0 3431 1313 3125 29828 23476;23477 23476 2 AMEAAQLADDLK Unmodified 1274.6177 0.61765209 2816 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 67.964 67.643 2 1.1849E-06 78381 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 115.78 86.62 318340000 0 123340000 0 10550000 8083600 14177000 10607000 17887000 8474300 18043000 22355000 18155000 12916000 12725000 41026000 3432 2816 3126 29829;29830;29831;29832;29833;29834;29835;29836;29837;29838;29839;29840;29841 23478;23479;23480;23481;23482;23483;23484;23485;23486;23487;23488;23489;23490;23491;23492 23491 15 AMEAAQLADDLK Oxidation (M) 1290.6126 0.61256672 2816 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.65 3.65 5 12 1 2 2 2 1 1 1 1 1 1 1 1 1 1 53.507 52.988 2 1.1267E-05 59666 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 105.86 89.093 414100000 216130 89704000 1610200 25091000 11114000 32539000 22246000 16498000 29057000 37904000 0 49557000 40277000 23352000 34929000 3433 2816 3126 29842;29843;29844;29845;29846;29847;29848;29849;29850;29851;29852;29853;29854;29855;29856;29857;29858 23493;23494;23495;23496;23497;23498;23499;23500;23501 23497 4451 5 AMEAVAAQGK Oxidation (M) 990.48043 0.48043033 1077 P18669;P15259 PGAM1;PGAM2 Phosphoglycerate mutase 1;Phosphoglycerate mutase 2 yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 6.1 3.91 8 2 10 3 6 1 1 1 1 1 1 1 1 1 1 1 10.577 9.0742 2 0.0010921 5656 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 94.302 59.495 1210300000 179140000 897580000 17841000 5055100 3283800 4178800 5158100 5236400 4651200 0 0 42741000 8138500 29709000 7610900 3434 1077 3127 29859;29860;29861;29862;29863;29864;29865;29866;29867;29868;29869;29870;29871;29872;29873;29874;29875;29876;29877;29878 23502;23503;23504;23505;23506;23507;23508;23509;23510;23511;23512;23513;23514;23515;23516;23517;23518;23519;23520 23519 1551 15 AMEAVAAQGK Unmodified 974.48552 0.48551571 1077 P18669;P15259 PGAM1;PGAM2 Phosphoglycerate mutase 1;Phosphoglycerate mutase 2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 7.42 3.66 3 1 8 1 2 1 1 1 1 1 2 2 17.749 16.778 1;2 3.5622E-06 20916 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 147.52 107.98 4934500000 330510000 4181500000 11939000 0 0 0 0 20927000 0 0 1216600 1875600 25496000 93881000 267160000 3435 1077 3127 29879;29880;29881;29882;29883;29884;29885;29886;29887;29888;29889;29890 23521;23522;23523;23524;23525;23526;23527;23528;23529;23530;23531 23521 9 AMEEMNGK Oxidation (M) 924.3681 0.36810269 407 O60506 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q yes yes 0 1 0 By MS/MS 2 0 1 1 5.6246 2.3843 2 0.025555 4234 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.774 27.449 10230000 0 10230000 0 0 0 0 0 0 0 0 0 0 0 0 0 3436 407 3128 29891 23532 23532 1 AMEGIFIKPSVEPSAGHDEL Oxidation (M) 2142.0303 0.030320436 4520 Q9HCN8 SDF2L1 Stromal cell-derived factor 2-like protein 1 yes yes 0 1 1 By MS/MS 3 0 1 1 79.116 75.745 3 0.0007962 90808 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 45.618 41.956 20637000 0 20637000 0 0 0 0 0 0 0 0 0 0 0 0 0 3437 4520 3129 29892 23533 23533 5945 1 AMEGIFIKPSVEPSAGHDEL Unmodified 2126.0354 0.035405813 4520 Q9HCN8 SDF2L1 Stromal cell-derived factor 2-like protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 82.912 80.45 3 0.0066356 97513 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 32.366 23.202 4037400 0 0 4037400 0 0 0 0 0 0 0 0 0 0 0 0 3438 4520 3129 29893 23534 23534 1 AMEGIFMK Unmodified 925.44015 0.44014542 4012 Q99470 SDF2 Stromal cell-derived factor 2 yes yes 0 0 0 By MS/MS 2 0 1 1 69.525 63.657 2 0.0365 81090 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.138 49.516 17279000 0 17279000 0 0 0 0 0 0 0 0 0 0 0 0 0 3439 4012 3130 29894 23535 23535 1 AMEIASQR Unmodified 904.44365 0.44365089 4115 Q9BRS2 RIOK1 Serine/threonine-protein kinase RIO1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 21.488 21.49 2 0.027721 22566 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 57.177 16.909 24309000 0 0 0 0 2985400 6623500 4448100 4765000 0 5487500 0 0 0 0 0 3440 4115 3131 29895;29896;29897;29898;29899 23536;23537;23538 23536 3 AMEMTWNNMEK 2 Oxidation (M) 1415.552 0.55195707 1053 P17480 UBTF Nucleolar transcription factor 1 yes yes 0 2 0 By MS/MS By matching By MS/MS 7.33 3.77 1 2 1 1 1 36.429 34.869 2 0.0054293 38432 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 44.203 42.233 24841000 0 14429000 0 1888000 0 0 0 0 0 0 0 8523900 0 0 0 3441 1053 3132 29900;29901;29902 23539;23540 23540 1470;1471 2 AMEMTWNNMEK Oxidation (M) 1399.557 0.55704245 1053 P17480 UBTF Nucleolar transcription factor 1 yes yes 0 1 0 By MS/MS 2 0 3 3 55.158 49.348 2 0.0027632 63387 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.358 79.948 25847000 0 25847000 0 0 0 0 0 0 0 0 0 0 0 0 0 3442 1053 3132 29903;29904;29905 23541;23542;23543;23544 23542 1470;1471 4 AMEMTWNNMEK Unmodified 1383.5621 0.56212782 1053 P17480 UBTF Nucleolar transcription factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 63.92 63.235 2 0.0057959 71514 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.028 68.22 46884000 0 17768000 0 0 0 0 0 0 0 0 6630600 10726000 2218600 3169600 6371800 3443 1053 3132 29906;29907;29908;29909;29910;29911 23545;23546;23547;23548;23549 23546 5 AMENIGELK Oxidation (M) 1019.4957 0.49574604 3041 Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 31.669 31.953 2 0.0033518 34948 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 83.998 40.752 390770000 0 0 0 0 0 50366000 0 35420000 43217000 57429000 61922000 0 52839000 41985000 47589000 3444 3041 3133 29912;29913;29914;29915;29916;29917;29918;29919 23550;23551;23552;23553;23554;23555 23550 4650 5 AMENIGELK Unmodified 1003.5008 0.50083142 3041 Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 46.506 44.697 2 0.0052193 50549 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 79.906 57.775 304540000 5613800 218980000 0 0 14778000 0 0 19021000 16403000 0 18295000 11445000 0 0 0 3445 3041 3133 29920;29921;29922;29923;29924;29925;29926 23556;23557;23558;23559;23560;23561;23562;23563;23564;23565;23566;23567 23558 11 AMENIGELKK Oxidation (M) 1147.5907 0.59070906 3041 Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 0 1 1 By MS/MS 2.5 0.5 1 1 2 27.571 23.311 3 0.022468 29095 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 40.727 24.056 30326000 0 30326000 0 0 0 0 0 0 0 0 0 0 0 0 0 3446 3041 3134 29927;29928 23568 23568 4650 1 AMEPELSTLSQK Unmodified 1332.6595 0.65951691 1026 P15822 HIVEP1 Zinc finger protein 40 yes yes 0 0 0 By MS/MS 2 0 1 1 63.118 57.224 2 0.027534 73448 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.434 61.074 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3447 1026 3135 29929 23569 23569 1 AMESTATAAVAAELVSADK Acetyl (Protein N-term);Oxidation (M) 1892.9037 0.90372294 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.39 3.71 1 3 2 12 2 2 2 1 1 1 1 1 1 1 1 1 1 1 1 90.251 89.67 2 9.5278E-181 107461 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 236.3 220.76 604170000 235160000 127780000 8204600 4080800 10350000 11745000 11273000 8422700 10836000 22276000 39473000 30665000 12588000 20190000 51126000 3448 1564 3136 29930;29931;29932;29933;29934;29935;29936;29937;29938;29939;29940;29941;29942;29943;29944;29945;29946;29947 23570;23571;23572;23573;23574;23575;23576;23577;23578;23579;23580;23581;23582;23583;23584;23585;23586;23587;23588;23589;23590 23573 2482 20 AMESTATAAVAAELVSADK Acetyl (Protein N-term) 1876.9088 0.90880832 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching 5.64 4.01 1 4 1 5 2 3 1 1 1 1 1 1 96.62 95.024 2 2.3797E-96 114777 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 236.3 227.3 868730000 494020000 350280000 5362300 0 0 0 0 714030 0 3939900 0 2921000 0 2430700 9073800 3449 1564 3136 29948;29949;29950;29951;29952;29953;29954;29955;29956;29957;29958 23591;23592;23593;23594;23595;23596;23597;23598 23597 7 AMESTATAAVAAELVSADKIEDVPAPSTSADK Acetyl (Protein N-term);Oxidation (M) 3203.5391 0.53913359 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 1 1 1 By MS/MS By MS/MS By MS/MS By MS/MS 4 3.46 3 1 1 1 1 1 93.978 90.156 3 8.1372E-198 112825 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 187.92 177.68 117390000 24394000 81010000 8283300 0 0 0 0 0 0 0 3706500 0 0 0 0 3450 1564 3137 29959;29960;29961;29962 23599;23600;23601;23602;23603 23602 2482 5 AMESTATAAVAAELVSADKIEDVPAPSTSADK Acetyl (Protein N-term) 3187.5442 0.54421896 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 1 0 1 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 97.5 93.067 3 8.3196E-241 115745 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 218.98 210.13 312200000 122120000 169470000 20610000 0 0 0 0 0 0 0 0 0 0 0 0 3451 1564 3137 29963;29964;29965;29966;29967 23604;23605;23606;23607;23608 23606 5 AMESTATAAVAAELVSADKIEDVPAPSTSADKVESLDVDSEAK Acetyl (Protein N-term);Oxidation (M) 4376.0952 0.095231281 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 1 1 2 By MS/MS 2 0 1 1 95.723 87.593 4 1.3469E-85 113245 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 102.29 90.143 19424000 19424000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3452 1564 3138 29968 23609 23609 2482 1 AMESTATAAVAAELVSADKIEDVPAPSTSADKVESLDVDSEAK Acetyl (Protein N-term) 4360.1003 0.10031666 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 1 0 2 By MS/MS By MS/MS 2 0 3 1 2 96.853 92.491 3;4 5.7578E-221 115514 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 164.94 154.52 106650000 67168000 0 39487000 0 0 0 0 0 0 0 0 0 0 0 0 3453 1564 3138 29969;29970;29971 23610;23611;23612;23613 23610 4 AMETEVLETR Unmodified 1177.5649 0.56488824 4333 Q9H0L4 CSTF2T Cleavage stimulation factor subunit 2 tau variant yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 46.905 47.342 2 0.026327 53255 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 44.318 23.797 26841000 0 0 0 0 0 0 0 0 0 0 5325500 0 6760900 4863200 9891800 3454 4333 3139 29972;29973;29974;29975 23614;23615;23616 23616 3 AMETEVLETR Oxidation (M) 1193.5598 0.55980286 4333 Q9H0L4 CSTF2T Cleavage stimulation factor subunit 2 tau variant yes yes 0 1 0 By MS/MS 10 0 1 1 33.814 34.124 2 0.019531 36527 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 43.282 30.326 2192100 0 0 0 0 0 0 0 0 0 0 0 0 0 2192100 0 3455 4333 3139 29976 23617 23617 5796 1 AMEVDERPTEQYSDIGGLDK Oxidation (M) 2268.0216 0.021606243 1066 P17980 PSMC3 26S protease regulatory subunit 6A yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.53 3 2 11 2 2 1 1 1 1 1 1 1 1 2 1 1 57.799 56.009 2;3 4.1701E-82 68234 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 146.78 138.14 555680000 31276000 107710000 16573000 25304000 43347000 43826000 14873000 15983000 0 55595000 61227000 86662000 16778000 0 36529000 3456 1066 3140 29977;29978;29979;29980;29981;29982;29983;29984;29985;29986;29987;29988;29989;29990;29991;29992 23618;23619;23620;23621;23622;23623;23624;23625;23626;23627;23628;23629;23630;23631;23632;23633;23634;23635 23625 1500 18 AMEVDERPTEQYSDIGGLDK Unmodified 2252.0267 0.026691621 1066 P17980 PSMC3 26S protease regulatory subunit 6A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.56 3.62 4 1 11 1 3 1 1 1 1 1 1 1 1 1 1 1 1 65.172 63.451 2;3 2.7909E-63 72791 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 122.53 117.43 703310000 37987000 426190000 7964400 11475000 10137000 26550000 5542200 13496000 0 32294000 36238000 29975000 7716400 12793000 44949000 3457 1066 3140 29993;29994;29995;29996;29997;29998;29999;30000;30001;30002;30003;30004;30005;30006;30007;30008 23636;23637;23638;23639;23640;23641;23642;23643;23644;23645;23646;23647;23648;23649;23650;23651;23652;23653;23654;23655 23653 20 AMEVEIEDLHLQIDDIAK Unmodified 2081.0351 0.035071462 3639 Q92614 MYO18A Unconventional myosin-XVIIIa yes yes 0 0 0 By MS/MS 2 0 1 1 94.675 86.545 3 2.4965E-05 112049 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.378 60.435 12916000 12916000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3458 3639 3141 30009 23656 23656 1 AMEWITAK Oxidation (M) 964.4688 0.46880301 2064 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.939 41.117 2 0.024045 46418 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 51.854 33.819 304630000 0 0 0 14078000 19558000 28485000 23965000 20030000 16285000 27758000 32547000 34895000 24271000 26382000 36372000 3459 2064 3142 30010;30011;30012;30013;30014;30015;30016;30017;30018;30019;30020;30021 23657;23658;23659;23660 23659 4 AMEWITAK Unmodified 948.47389 0.47388839 2064 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 57.445 57.596 2 0.030437 64748 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 55.531 39.377 386490000 0 0 0 0 21816000 36775000 24914000 39272000 33278000 42548000 47381000 63267000 34086000 43148000 0 3460 2064 3142 30022;30023;30024;30025;30026;30027;30028;30029;30030;30031 23661 23661 1 AMFANQLDAR Oxidation (M) 1151.5393 0.53934219 4669 Q9NVI1 FANCI Fanconi anemia group I protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 2 1 1 1 1 1 40.11 40.121 2 0.0037393 44980 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 67.993 50.753 30866000 0 0 0 4674400 5350400 3067500 4278100 0 0 4220800 5300000 0 3974400 0 0 3461 4669 3143 30032;30033;30034;30035;30036;30037;30038;30039;30040 23662;23663;23664;23665;23666;23667;23668;23669 23669 6083 8 AMFDSDFK Unmodified 959.40587 0.4058684 2743 Q5JVF3 PCID2 PCI domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 55.192 55.22 2 0.047929 61320 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.657 36.246 40097000 0 0 0 2140900 2160600 4878000 1739200 3653300 0 0 0 0 5283200 4999600 15242000 3462 2743 3144 30041;30042;30043;30044;30045;30046;30047;30048 23670 23670 1 AMFEQMRANVGK Acetyl (Protein N-term) 1422.6748 0.67478982 4851 Q9UBQ5 EIF3K Eukaryotic translation initiation factor 3 subunit K yes yes 1 0 1 By MS/MS By MS/MS 2 0 2 1 1 82.287 75.869 2 4.3672E-27 95866 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 179.42 161.2 92542000 64187000 28355000 0 0 0 0 0 0 0 0 0 0 0 0 0 3463 4851 3145 30049;30050 23671;23672 23671 2 AMFEQMRANVGK Acetyl (Protein N-term);Oxidation (M) 1438.6697 0.66970444 4851 Q9UBQ5 EIF3K Eukaryotic translation initiation factor 3 subunit K yes yes 1 1 1 By MS/MS 2 0 1 1 67.229 58.934 2 0.00023311 78996 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.895 78.48 10275000 10275000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3464 4851 3145 30051 23673 23673 6212 1 AMFESQSEDELTPFDMSIQCIQSVYISK Unmodified 3282.4771 0.47706738 973 P12956 XRCC6 X-ray repair cross-complementing protein 6 yes yes 0 0 0 By MS/MS 2 0 1 1 99.039 90.909 3 0.0010002 117243 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.256 38.497 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3465 973 3146 30052 23674 23674 1 AMGAAQVVVTDLSATRLSK Unmodified 1917.0353 0.035346234 2045 Q00796 SORD Sorbitol dehydrogenase yes yes 0 0 1 By MS/MS 2 0 1 1 87.547 79.417 3 7.4895E-05 103391 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.564 53.128 20224000 20224000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3466 2045 3147 30053 23675 23675 1 AMGDAEIK Unmodified 833.3953 0.39530372 1358 P35606 COPB2 Coatomer subunit beta' yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.24 2.35 2 19 1 1 1 2 2 2 2 2 1 1 2 1 2 1 17.379 17.102 2 0.022229 24060 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.753 15.354 475310000 17919000 277500000 0 7215100 9141400 15045000 11905000 12219000 9877100 12729000 21539000 27897000 4478700 21569000 26272000 3467 1358 3148 30054;30055;30056;30057;30058;30059;30060;30061;30062;30063;30064;30065;30066;30067;30068;30069;30070;30071;30072;30073;30074 23676;23677;23678;23679 23676 4 AMGEQLLPGK Unmodified 1042.5481 0.54811597 2425 Q14671 PUM1 Pumilio homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 51.535 51.755 2 0.0015787 57629 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 93.467 62.906 263150000 0 0 0 0 12903000 17427000 15126000 28222000 12156000 22967000 26176000 41894000 26737000 23887000 35652000 3468 2425 3149 30075;30076;30077;30078;30079;30080;30081;30082;30083;30084;30085 23680;23681;23682;23683;23684;23685;23686;23687;23688;23689;23690 23687 10 AMGEQLLPGK Oxidation (M) 1058.543 0.54303059 2425 Q14671 PUM1 Pumilio homolog 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 38.322 38.409 2 0.0058643 43151 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 58.916 37.213 116110000 0 0 0 12323000 11691000 9047300 16997000 12951000 11508000 11594000 13288000 16714000 0 0 0 3469 2425 3149 30086;30087;30088;30089;30090;30091;30092;30093;30094 23691;23692;23693;23694;23695;23696 23695 3975 6 AMGIMNSFVNDIFER 2 Oxidation (M) 1774.8018 0.80184082 432;833 Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;P57053;O60814;Q8N257;Q16778;P33778;P23527;P06899 HIST1H2BL;HIST1H2BM;HIST1H2BN;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;H2BFS;HIST1H2BK;HIST3H2BB;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 3-B;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J no no 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 86.503 86.533 2 6.7233E-05 99963 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.451 56.25 28800000 0 0 0 1940500 0 5499600 0 0 0 7628300 6143100 0 0 0 7589000 3470 432;833 3150 30095;30096;30097;30098;30099 23697;23698;23699;23700;23701 23699 552;553 4 AMGLAEEDEHAPR Unmodified 1424.6354 0.63542742 1536 P48382 RFX5 DNA-binding protein RFX5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 2 2 2 1 1 2 2 2 1 2 2 33.626 33.87 2;3 4.2434E-07 36847 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 96.342 82.572 220290000 0 0 0 0 15554000 15393000 11167000 17293000 8463300 21724000 24006000 43622000 19852000 15103000 28115000 3471 1536 3151 30100;30101;30102;30103;30104;30105;30106;30107;30108;30109;30110;30111;30112;30113;30114;30115;30116;30117;30118 23702;23703;23704;23705;23706;23707;23708;23709;23710;23711;23712;23713;23714;23715;23716;23717;23718;23719 23711 17 AMGLAEEDEHAPR Oxidation (M) 1440.6303 0.63034205 1536 P48382 RFX5 DNA-binding protein RFX5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 23.247 23.389 3 0.00043317 25005 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 62.891 60.104 71128000 0 0 0 4687000 8697100 6221400 7633800 7036500 5242600 0 10474000 13692000 0 7443600 0 3472 1536 3151 30119;30120;30121;30122;30123;30124;30125;30126;30127 23720;23721;23722;23723;23724;23725;23726;23727 23727 2439 4 AMGLAEEDEHAPRER Oxidation (M) 1725.774 0.77404617 1536 P48382 RFX5 DNA-binding protein RFX5 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 2 2 2 1 2 1 1 2 2 2 2 20.955 21.133 3;4 6.8859E-11 22022 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 97.203 81.065 208150000 0 0 0 19779000 18738000 19397000 8279300 25104000 9235700 8989900 26389000 0 30889000 24968000 16383000 3473 1536 3152 30128;30129;30130;30131;30132;30133;30134;30135;30136;30137;30138;30139;30140;30141;30142;30143;30144;30145;30146 23728;23729;23730;23731;23732;23733;23734;23735;23736;23737;23738;23739;23740;23741;23742;23743 23738 2439 12 AMGLAEEDEHAPRER Unmodified 1709.7791 0.77913155 1536 P48382 RFX5 DNA-binding protein RFX5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 29.653 29.845 3;4 8.125E-06 31743 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 63.128 50.01 432950000 0 0 0 22688000 20870000 26569000 27002000 42746000 36251000 30926000 36493000 33520000 59894000 50538000 45449000 3474 1536 3152 30147;30148;30149;30150;30151;30152;30153;30154;30155;30156;30157;30158;30159;30160;30161;30162;30163;30164;30165;30166;30167;30168;30169;30170 23744;23745;23746;23747;23748;23749;23750;23751;23752;23753;23754;23755;23756;23757;23758 23750 11 AMGPLVLTEVLFNEK Oxidation (M) 1675.8855 0.8854941 1751 P55010 EIF5 Eukaryotic translation initiation factor 5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.17 3.85 2 1 3 1 2 1 1 1 97.178 94.559 2 7.1239E-40 117177 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 143 124.73 148340000 87781000 54725000 0 0 0 0 0 0 0 2049800 1073200 0 0 0 2711200 3475 1751 3153 30171;30172;30173;30174;30175;30176 23759;23760;23761;23762;23763;23764 23763 2848 6 AMGPLVLTEVLFNEK Unmodified 1659.8906 0.89057948 1751 P55010 EIF5 Eukaryotic translation initiation factor 5 yes yes 0 0 0 By MS/MS 2 0 1 1 101.38 93.249 2 0.00074523 120108 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 111.63 101.97 19919000 19919000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3476 1751 3153 30177 23765;23766;23767 23766 3 AMGQGLPDEEQEK Oxidation (M) 1446.6297 0.62967334 5211 Q9Y4W2 LAS1L Ribosomal biogenesis protein LAS1L yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 24.366 24.577 2 0.0001769 25693 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 82.417 76.921 41980000 0 0 0 0 3814300 6734100 4223900 0 0 0 5785000 0 6977100 6330200 8114900 3477 5211 3154 30178;30179;30180;30181;30182;30183;30184 23768;23769;23770;23771;23772;23773;23774 23773 6612 7 AMGQGLPDEEQEK Unmodified 1430.6348 0.63475872 5211 Q9Y4W2 LAS1L Ribosomal biogenesis protein LAS1L yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 35.307 35.063 2 0.00072623 38718 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 71.524 50.785 133250000 0 12986000 0 8339900 5556600 9561600 5333300 8489000 0 12125000 10084000 11544000 18115000 11621000 19492000 3478 5211 3154 30185;30186;30187;30188;30189;30190;30191;30192;30193;30194;30195;30196 23775;23776;23777;23778;23779;23780;23781;23782;23783;23784;23785;23786;23787 23776 12 AMHESALLEEQR Unmodified 1412.6718 0.67181293 488 O75376 NCOR1 Nuclear receptor corepressor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 37.223 37.561 3 0.00064086 40998 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 51.567 43.905 35291000 0 0 0 0 3762000 0 0 0 0 0 0 14448000 0 0 17082000 3479 488 3155 30197;30198;30199;30200;30201;30202 23788;23789;23790;23791;23792;23793;23794 23793 7 AMHESALLEEQR Oxidation (M) 1428.6667 0.66672755 488 O75376 NCOR1 Nuclear receptor corepressor 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 28.751 28.943 3 0.0083724 31696 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 49.934 13.614 36541000 0 0 0 0 8401500 0 0 0 6889500 0 0 0 10787000 0 10463000 3480 488 3155 30203;30204;30205;30206 23795 23795 630 0 AMHGELQK Unmodified 912.44874 0.44873627 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 7.33 3.77 3 6 1 1 1 1 1 1 1 1 1 7.8395 6.8833 2 0.0024122 7993 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 125.81 83.34 1220300000 627350000 368460000 199830000 2192000 2831700 0 0 4914600 0 4988200 0 0 0 2874700 6832700 3481 1986 3156 30207;30208;30209;30210;30211;30212;30213;30214;30215 23796;23797;23798;23799;23800;23801;23802 23802 7 AMHGELQK Oxidation (M) 928.44365 0.44365089 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 4.2301 1.3066 2 0.0021719 845 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 122.74 72.615 1697800000 872830000 728920000 96023000 0 0 0 0 0 0 0 0 0 0 0 0 3482 1986 3156 30216;30217;30218 23803;23804;23805;23806;23807;23808 23807 3208 6 AMHQAQTMEGCSSPMVVK Oxidation (M) 2006.8682 0.8682226 3677 Q92879 CELF1 CUGBP Elav-like family member 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.42 3.91 10 1 8 4 5 2 1 1 1 1 1 1 1 1 39.363 36.2 3 7.4551E-12 41081 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 89.866 85.34 227860000 62499000 102890000 5871600 0 5799600 0 6218500 10839000 4752000 0 0 9132700 11272000 8588600 0 3483 3677 3157 30219;30220;30221;30222;30223;30224;30225;30226;30227;30228;30229;30230;30231;30232;30233;30234;30235;30236;30237 23809;23810;23811;23812;23813;23814;23815;23816;23817;23818;23819;23820;23821;23822;23823;23824;23825;23826;23827;23828 23826 5223;5224;5225 20 AMHQAQTMEGCSSPMVVK 2 Oxidation (M) 2022.8631 0.86313723 3677 Q92879 CELF1 CUGBP Elav-like family member 1 yes yes 0 2 0 By MS/MS By MS/MS 2 0 5 2 3 32.38 27.237 3 1.8343E-05 37461 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.184 63.02 66667000 14879000 51789000 0 0 0 0 0 0 0 0 0 0 0 0 0 3484 3677 3157 30238;30239;30240;30241;30242 23829;23830;23831;23832;23833 23830 5223;5224;5225 5 AMHQAQTMEGCSSPMVVK 3 Oxidation (M) 2038.8581 0.85805185 3677 Q92879 CELF1 CUGBP Elav-like family member 1 yes yes 0 3 0 By matching By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 23.197 19.24 3 0.00026467 24016 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 56.215 51.11 24687000 5318900 13854000 5513900 0 0 0 0 0 0 0 0 0 0 0 0 3485 3677 3157 30243;30244;30245;30246 23834;23835 23834 5223;5224;5225 2 AMHQAQTMEGCSSPMVVK Unmodified 1990.8733 0.87330798 3677 Q92879 CELF1 CUGBP Elav-like family member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 49.372 43.522 3 1.0045E-14 59845 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 112.16 108.19 115760000 59030000 48595000 8132300 0 0 0 0 0 0 0 0 0 0 0 0 3486 3677 3157 30247;30248;30249 23836 23836 1 AMIENFNAK Oxidation (M) 1052.4961 0.4960804 1435 P41227;Q9BSU3 NAA10;NAA11 N-alpha-acetyltransferase 10;N-alpha-acetyltransferase 11 yes no 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 17 1 2 1 2 2 2 2 3 1 1 31.761 31.914 2 0.0019922 34538 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 91.626 76.245 3588200000 0 0 0 12215000 47670000 23581000 342570000 337530000 250780000 721220000 1019600000 824890000 0 0 8073800 3487 1435 3158 30250;30251;30252;30253;30254;30255;30256;30257;30258;30259;30260;30261;30262;30263;30264;30265;30266 23837;23838;23839;23840;23841;23842;23843;23844;23845;23846;23847;23848;23849;23850;23851;23852;23853;23854 23851 2250 18 AMIENFNAK Unmodified 1036.5012 0.50116577 1435 P41227;Q9BSU3 NAA10;NAA11 N-alpha-acetyltransferase 10;N-alpha-acetyltransferase 11 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 44.043 44.13 2 0.0040478 49096 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 98.299 70.774 6696500000 0 0 0 30130000 74051000 0 306010000 503590000 356100000 1055200000 1854900000 2516500000 0 0 0 3488 1435 3158 30267;30268;30269;30270;30271;30272;30273;30274 23855;23856;23857;23858;23859;23860 23860 6 AMIEVEDFVDPNGK Oxidation (M) 1578.7236 0.72357373 3615 Q92538 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.12 3.72 2 1 5 1 2 1 1 1 1 1 78.724 77.185 2 9.0632E-45 94756 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 173.64 151 102790000 0 89591000 0 0 0 0 3497800 0 0 5476400 0 0 4225400 0 0 3489 3615 3159 30275;30276;30277;30278;30279;30280;30281;30282 23861;23862;23863;23864;23865;23866;23867;23868;23869 23864 5109 9 AMIEVEDFVDPNGK Unmodified 1562.7287 0.72865911 3615 Q92538 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 86.704 81.317 2 5.5688E-31 102148 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 150.04 131.37 86367000 8531600 77836000 0 0 0 0 0 0 0 0 0 0 0 0 0 3490 3615 3159 30283;30284;30285 23870;23871;23872;23873 23870 4 AMKPPGGESSNLFGSPEEATPSSRPNR Unmodified 2799.3246 0.32460498 4460 Q9H910 HN1L Hematological and neurological expressed 1-like protein yes yes 0 0 2 By MS/MS 10 0 1 1 55.981 56.605 4 1.0738E-10 63357 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 31.127 28.585 35661000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35661000 3491 4460 3160 30286 23874;23875 23874 2 AMLAQQYQEGTLSVEK Oxidation (M) 1810.8771 0.87711426 1802 P58107 EPPK1 Epiplakin yes yes 0 1 0 By MS/MS By matching By MS/MS By matching 10 0 4 1 1 1 1 56.301 56.061 2 0.0026577 64302 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 43.897 34.942 9536900 0 0 0 2776800 1737300 2674300 0 2348600 0 0 0 0 0 0 0 3492 1802 3161 30287;30288;30289;30290 23876 23876 2919 1 AMLDELAMETLQEK Unmodified 1620.7739 0.77389474 2689 Q4V328 GRIPAP1 GRIP1-associated protein 1 yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 91.599 87.254 2;3 4.953E-18 108491 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 155.33 138.31 135330000 0 135330000 0 0 0 0 0 0 0 0 0 0 0 0 0 3493 2689 3162 30291;30292;30293 23877;23878;23879 23878 3 AMLDQLMGTSR 2 Oxidation (M) 1253.5744 0.57440707 5141 Q9Y383 LUC7L2 Putative RNA-binding protein Luc7-like 2 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 1 1 2 1 1 2 1 2 2 2 1 35.585 35.807 2 0.00023502 38728 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 77.662 59.843 137900000 0 0 0 5479600 7083800 5828800 13642000 6453300 5160000 17192000 8306800 23232000 22023000 11420000 12076000 3494 5141 3163 30294;30295;30296;30297;30298;30299;30300;30301;30302;30303;30304;30305;30306;30307;30308;30309;30310 23880;23881;23882;23883;23884;23885;23886;23887;23888;23889;23890;23891;23892;23893;23894;23895;23896;23897 23888 6528;6529 17 AMLDQLMGTSR Oxidation (M) 1237.5795 0.57949245 5141 Q9Y383 LUC7L2 Putative RNA-binding protein Luc7-like 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 27 4 2 2 3 1 2 2 2 2 1 3 3 53.855 54.046 2 0.00023832 62254 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 87.913 75.325 226920000 0 0 0 8198200 14003000 17130000 17358000 6877700 12966000 19223000 25494000 35009000 12911000 23809000 33939000 3495 5141 3163 30311;30312;30313;30314;30315;30316;30317;30318;30319;30320;30321;30322;30323;30324;30325;30326;30327;30328;30329;30330;30331;30332;30333;30334;30335;30336;30337 23898;23899;23900;23901;23902;23903;23904;23905;23906;23907;23908;23909;23910;23911;23912;23913;23914;23915;23916;23917;23918;23919;23920;23921;23922;23923;23924;23925;23926 23918 6528;6529 28 AMLDQLMGTSR Unmodified 1221.5846 0.58457783 5141 Q9Y383 LUC7L2 Putative RNA-binding protein Luc7-like 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.356 73.397 2 0.00045534 84596 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 97.456 75.37 143370000 0 0 0 6053900 8747900 13947000 10426000 14492000 7666000 16118000 18012000 22168000 10507000 15236000 0 3496 5141 3163 30338;30339;30340;30341;30342;30343;30344;30345;30346;30347;30348;30349 23927;23928;23929;23930;23931;23932;23933;23934;23935;23936;23937;23938;23939 23934 13 AMLDSGIYPPGSPGK Oxidation (M) 1504.7232 0.7231798 639 O95295 SNAPIN SNARE-associated protein Snapin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 56.384 56.468 2 0.00014805 63620 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.01 62.122 27287000 0 0 0 0 4982500 5805600 3603700 6889000 0 0 0 0 0 0 6006100 3497 639 3164 30350;30351;30352;30353;30354;30355;30356 23940;23941;23942;23943;23944 23943 777 5 AMLDSGIYPPGSPGK Unmodified 1488.7283 0.72826518 639 O95295 SNAPIN SNARE-associated protein Snapin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.84 66.923 2 0.0032308 76627 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 56.225 42.406 43849000 0 0 0 1853300 2609300 2617500 2449900 2951700 2459200 4289200 5093900 6063800 3217700 3030300 7213500 3498 639 3164 30357;30358;30359;30360;30361;30362;30363;30364;30365;30366;30367;30368 23945;23946;23947;23948;23949 23949 5 AMLENEK Oxidation (M) 849.39022 0.39021834 1198 P26038 MSN Moesin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.4 3.2 1 4 1 1 1 1 1 6.4966 6.0127 2 0.045571 4428 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 50.855 31.416 58959000 0 44434000 0 0 0 0 0 0 0 0 5527400 3832000 1704100 3462100 0 3499 1198 3165 30369;30370;30371;30372;30373 23950;23951;23952 23952 1732 3 AMLESIGVPLEK Oxidation (M) 1301.6901 0.69008876 1740 P54577 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 73.319 71.901 2 8.4449E-10 92002 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 123.96 108.75 868110000 32580000 716280000 27368000 5774300 0 9198700 0 10031000 0 9096900 9925700 8020800 5752900 9296900 24784000 3500 1740 3166 30374;30375;30376;30377;30378;30379;30380;30381;30382;30383;30384;30385;30386 23953;23954;23955;23956;23957;23958;23959;23960;23961;23962;23963;23964;23965 23958 2823 12 AMLESIGVPLEK Unmodified 1285.6952 0.69517413 1740 P54577 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 80.311 79.002 2 0.00094109 94524 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 90.15 48.041 3203700000 57489000 3032300000 21952000 3682100 3223300 10157000 5493400 11183000 0 12655000 14025000 10766000 5203700 15502000 0 3501 1740 3166 30387;30388;30389;30390;30391;30392;30393;30394;30395;30396;30397;30398;30399;30400 23966;23967;23968;23969;23970;23971;23972;23973;23974;23975;23976;23977 23970 11 AMLEVHK Unmodified 826.43711 0.43710895 1695 P52732 KIF11 Kinesin-like protein KIF11 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 24.863 20.794 2 0.029852 26657 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 94.163 68.606 108610000 85540000 0 23067000 0 0 0 0 0 0 0 0 0 0 0 0 3502 1695 3167 30401;30402 23978;23979;23980 23980 3 AMLFDENK Unmodified 966.44807 0.44806757 5247 Q9Y5S2 CDC42BPB Serine/threonine-protein kinase MRCK beta yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 45.354 45.756 2 0.045385 50085 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.561 35.009 16431000 0 0 0 0 0 0 0 2777900 0 0 2014300 0 0 5054900 6584300 3503 5247 3168 30403;30404;30405;30406 23981;23982 23981 2 AMLIEAGSPFREPLIK Oxidation (M) 1786.9651 0.9651414 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 78.582 78.715 3 0.0015265 90945 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 43.297 26.219 53915000 0 0 0 0 0 8760400 0 7977200 0 12887000 0 0 0 0 24291000 3504 5189 3169 30407;30408;30409;30410 23983;23984;23985;23986 23984 6578 4 AMLNNVVRPR Unmodified 1168.6499 0.6498957 4167 Q9BUP3 HTATIP2 Oxidoreductase HTATIP2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.174 40.353 3 0.0013257 44481 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 87.308 76.598 133980000 0 0 0 7368400 8750700 10016000 7466500 9101100 7378200 11179000 17903000 14603000 10013000 11334000 18865000 3505 4167 3170 30411;30412;30413;30414;30415;30416;30417;30418;30419;30420;30421;30422 23987;23988;23989;23990 23989 4 AMLPGSPLFTR Unmodified 1188.6325 0.6325143 3542 Q8WUF5 PPP1R13L RelA-associated inhibitor yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.658 79.717 2 0.0073733 92143 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 57.859 39.634 76240000 0 0 0 3813000 2521400 5586400 3663000 6503600 4311700 7361700 7009400 8820500 4723300 5262200 16664000 3506 3542 3171 30423;30424;30425;30426;30427;30428;30429;30430;30431;30432;30433;30434 23991;23992;23993;23994;23995;23996;23997;23998;23999 23992 9 AMLPGSPLFTR Oxidation (M) 1204.6274 0.62742892 3542 Q8WUF5 PPP1R13L RelA-associated inhibitor yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 73.632 73.705 2 0.0003251 84249 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.456 63.669 226670000 0 0 0 15330000 11862000 0 16690000 16807000 16162000 22839000 27051000 30340000 25947000 15704000 27941000 3507 3542 3171 30435;30436;30437;30438;30439;30440;30441;30442;30443;30444;30445 24000;24001;24002;24003;24004;24005;24006;24007;24008;24009;24010;24011;24012 24004 5032 13 AMLQEIANQK Oxidation (M) 1160.586 0.58595803 4325 Q9H0E3 SAP130 Histone deacetylase complex subunit SAP130 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 9 2.45 1 6 1 1 1 1 1 1 1 33.897 32.757 2 0.0087548 36512 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 51.346 24.962 12793000 0 4573700 0 0 3126100 0 0 0 2021300 0 0 0 0 3072000 0 3508 4325 3172 30446;30447;30448;30449;30450;30451;30452 24013;24014;24015;24016;24017 24017 5788 5 AMLQEIANQK Unmodified 1144.591 0.59104341 4325 Q9H0E3 SAP130 Histone deacetylase complex subunit SAP130 yes yes 0 0 0 By MS/MS 3 0 1 1 54.086 49.196 2 0.0050239 60940 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 86.833 43.964 3309600 0 3309600 0 0 0 0 0 0 0 0 0 0 0 0 0 3509 4325 3172 30453 24018 24018 1 AMLQVNPEER Oxidation (M) 1201.5761 0.57612163 234 O14976 GAK Cyclin-G-associated kinase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 35.228 35.262 2 0.0019524 38677 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 78.334 31.909 69025000 0 0 0 7092700 4833400 10156000 8347700 7552800 0 11714000 9202900 0 10126000 0 0 3510 234 3173 30454;30455;30456;30457;30458;30459;30460;30461 24019;24020;24021;24022;24023;24024 24020 311 5 AMLQVNPEER Unmodified 1185.5812 0.58120701 234 O14976 GAK Cyclin-G-associated kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 46.78 46.934 2 0.00091577 52222 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 133.86 73.103 98468000 0 0 0 0 9138600 13584000 9469900 0 0 16604000 0 17025000 17709000 14938000 0 3511 234 3173 30462;30463;30464;30465;30466;30467;30468;30469;30470 24025;24026;24027;24028;24029;24030;24031;24032;24033;24034 24033 10 AMLRVQPEAQAK Acetyl (Protein N-term);Oxidation (M) 1398.7289 0.72893388 2127 Q06323 PSME1 Proteasome activator complex subunit 1 yes yes 1 1 1 By MS/MS By MS/MS 2 0 2 1 1 49.158 42.426 2 5.6679E-06 55232 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.52 76.009 215520000 13231000 202290000 0 0 0 0 0 0 0 0 0 0 0 0 0 3512 2127 3174 30471;30472 24035;24036;24037 24035 3431 3 AMLRVQPEAQAK Acetyl (Protein N-term) 1382.734 0.73401926 2127 Q06323 PSME1 Proteasome activator complex subunit 1 yes yes 1 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 63.946 57.625 2 2.6807E-22 77074 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 161.17 134.66 312330000 59000000 253330000 0 0 0 0 0 0 0 0 0 0 0 0 0 3513 2127 3174 30473;30474;30475 24038;24039;24040;24041;24042 24042 5 AMLSGPGQFAENETNEVNFR Oxidation (M) 2226.0011 0.0011455721 2522 Q15369 TCEB1 Transcription elongation factor B polypeptide 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 1 2 2 2 2 2 2 2 74.921 74.975 2;3 2.7122E-63 86445 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 138.66 125.43 587920000 0 0 0 11744000 35430000 52661000 23782000 17126000 22651000 79537000 60536000 89967000 34188000 36306000 124000000 3514 2522 3175 30476;30477;30478;30479;30480;30481;30482;30483;30484;30485;30486;30487;30488;30489;30490;30491;30492;30493;30494;30495;30496;30497;30498 24043;24044;24045;24046;24047;24048;24049;24050;24051;24052;24053;24054;24055;24056;24057 24057 4156 15 AMLSGPGQFAENETNEVNFR Unmodified 2210.0062 0.00623095 2522 Q15369 TCEB1 Transcription elongation factor B polypeptide 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 78.616 78.826 3 0.0070817 90578 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 30.21 28.943 40160000 0 0 0 0 0 0 0 0 0 0 0 25833000 0 0 14326000 3515 2522 3175 30499;30500 24058 24058 1 AMLSHQQLKQMSAPRK 2 Oxidation (M) 1884.9662 0.96622081 5359 yes yes 0 2 2 By MS/MS 2 0 1 1 97.962 89.831 2 0.0061229 116106 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.092 51.092 + 423450000 423450000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3516 5359 3176 30501 24059 24059 6743;6744 0 AMLSTGFK Oxidation (M) 869.43169 0.43168922 1300;1224 P27708;P31327 CAD;CPS1 CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase;Carbamoyl-phosphate synthase [ammonia], mitochondrial no no 0 1 0 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 2 3 1 36.684 31.572 2 0.022809 39260 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 79.469 24.943 527560000 188940000 317520000 21111000 0 0 0 0 0 0 0 0 0 0 0 0 3517 1224;1300 3177 30502;30503;30504;30505;30506;30507 24060;24061;24062;24063 24062 4 AMLSTGFK Unmodified 853.43677 0.4367746 1300;1224 P27708;P31327 CAD;CPS1 CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase;Carbamoyl-phosphate synthase [ammonia], mitochondrial no no 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 50.842 44.954 2 0.029412 61732 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.774 28.601 458310000 222300000 218050000 17968000 0 0 0 0 0 0 0 0 0 0 0 0 3518 1224;1300 3177 30508;30509;30510 24064;24065;24066;24067 24065 4 AMLWLSEK Oxidation (M) 992.5001 0.50010314 1063 P17858 PFKL ATP-dependent 6-phosphofructokinase, liver type yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 57.012 57.187 2 0.00575 65504 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 85.212 63.912 77917000 0 0 0 0 0 18654000 11469000 12124000 0 17073000 18597000 0 0 0 0 3519 1063 3178 30511;30512;30513;30514;30515;30516;30517 24068;24069;24070;24071;24072 24069 1493 5 AMLWLSEK Unmodified 976.50519 0.50518852 1063 P17858 PFKL ATP-dependent 6-phosphofructokinase, liver type yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73.423 72.704 2 0.0064997 94724 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 130.04 96.036 362810000 157330000 0 15722000 6876900 9239200 15534000 8023800 12053000 9763300 17691000 17388000 19708000 13916000 19179000 40384000 3520 1063 3178 30518;30519;30520;30521;30522;30523;30524;30525;30526;30527;30528;30529;30530;30531 24073;24074;24075;24076;24077;24078;24079 24076 7 AMMVFPR Acetyl (Protein N-term) 892.42992 0.42991509 4321 Q9H0B6 KLC2 Kinesin light chain 2 yes yes 1 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 85.735 85.89 2 0.034478 99216 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.066 29.08 5026800 0 0 0 0 0 0 0 1041000 0 1512600 0 0 0 0 2473200 3521 4321 3179 30532;30533;30534 24080 24080 1 AMMVFPR Acetyl (Protein N-term);Oxidation (M) 908.42483 0.42482971 4321 Q9H0B6 KLC2 Kinesin light chain 2 yes yes 1 1 0 By MS/MS By matching 10 0 2 1 1 75.541 75.413 2 0.0074581 87254 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 56.51 30.401 2636500 0 0 0 0 1074000 0 0 0 0 1562400 0 0 0 0 0 3522 4321 3179 30535;30536 24081 24081 5782;5783 1 AMMVFPREEK Acetyl (Protein N-term) 1278.6101 0.6100643 4321 Q9H0B6 KLC2 Kinesin light chain 2 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 75.482 75.647 2 0.018486 87299 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 48.796 33.134 29217000 0 0 0 0 0 0 0 5865100 0 3748900 0 0 3413900 3431000 12758000 3523 4321 3180 30537;30538;30539;30540;30541 24082;24083;24084;24085;24086 24082 5 AMMVFPREEK Acetyl (Protein N-term);Oxidation (M) 1294.605 0.60497892 4321 Q9H0B6 KLC2 Kinesin light chain 2 yes yes 1 1 1 By MS/MS 2 0 1 1 40.024 36.476 2 0.016947 46078 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 49.097 8.0677 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3524 4321 3180 30542 24087 24087 5782;5783 1 AMNGESLDGR Unmodified 1048.4608 0.46075752 2026 P98179 RBM3 RNA-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 21.393 21.58 2 0.0029855 22003 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 108.98 77.688 153860000 0 0 0 0 12573000 0 18171000 0 9656500 18883000 0 0 14773000 29197000 50604000 3525 2026 3181 30543;30544;30545;30546;30547;30548;30549;30550;30551;30552;30553 24088;24089;24090;24091;24092;24093;24094;24095;24096;24097;24098 24097 11 AMNGESLDGR Oxidation (M) 1064.4557 0.45567214 2026 P98179 RBM3 RNA-binding protein 3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.583 11.744 2 0.017585 10752 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 44.203 32.434 81224000 0 0 0 7482600 4544700 3780100 0 4853600 3779400 6959200 9982500 16134000 5279000 6335500 12093000 3526 2026 3181 30554;30555;30556;30557;30558;30559;30560;30561;30562;30563;30564 24099;24100 24100 3279 2 AMNQPLNHMNLHPAVSSTPVPQR 2 Oxidation (M) 2570.2482 0.24820933 4309 Q9GZV5 WWTR1 WW domain-containing transcription regulator protein 1 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 46.568 46.822 4 4.2336E-05 52840 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 40.756 37.093 26711000 0 0 0 0 0 5261000 6749000 0 3257100 0 0 11444000 0 0 0 3527 4309 3182 30565;30566;30567;30568 24101 24101 5769;5770 1 AMNQQTTLDTPQLER Unmodified 1744.8414 0.84139745 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 55.473 55.532 2 3.5364E-14 62197 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 99.522 82.497 31511000 0 0 0 2819600 2866300 3024800 2947600 2949700 0 3477000 3003300 0 0 4567600 5855000 3528 619 3183 30569;30570;30571;30572;30573;30574;30575;30576;30577 24102;24103;24104;24105;24106;24107;24108;24109 24107 8 AMNQQTTLDTPQLER Oxidation (M) 1760.8363 0.83631208 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 48.998 49.578 2 4.7263E-13 55018 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 105.46 87.652 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3529 619 3183 30578;30579 24110;24111 24110 756 2 AMNQQTTLDTPQLERK Oxidation (M) 1888.9313 0.93127509 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 1 1 By MS/MS 2 0 1 1 45.645 40.324 3 0.037932 52417 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 51.606 45.339 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3530 619 3184 30580 24112 24112 756 1 AMNVLTEAEER Unmodified 1261.5973 0.597251 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 55.789 55.715 2 0.0048314 63248 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 60.518 47.991 20405000 0 0 0 2710600 2730700 4112700 2095900 2872800 0 3497000 0 0 0 2384800 0 3531 643 3185 30581;30582;30583;30584;30585;30586;30587 24113;24114 24113 2 AMNWMSGK Unmodified 923.39934 0.39934324 861 P08237 PFKM ATP-dependent 6-phosphofructokinase, muscle type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 43.937 44.184 2 0.018722 48702 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.207 30.354 177680000 0 0 0 0 11063000 15434000 0 15910000 7889000 12255000 21650000 31498000 0 23274000 38709000 3532 861 3186 30588;30589;30590;30591;30592;30593;30594;30595;30596 24115;24116;24117;24118;24119;24120;24121;24122 24121 8 AMPLQPSILR Unmodified 1124.6376 0.63759967 1556 P49005 POLD2 DNA polymerase delta subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.453 74.516 2 0.0077624 85888 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 61.679 50.457 126250000 0 0 0 6223700 8152500 9659900 8436300 8998100 8338300 11854000 12683000 12272000 8283700 10557000 20786000 3533 1556 3187 30597;30598;30599;30600;30601;30602;30603;30604;30605;30606;30607;30608 24123;24124;24125;24126;24127;24128;24129;24130;24131 24123 9 AMPTLLAK Unmodified 843.48881 0.48881017 5375 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 48.777 48.642 2 0.027249 55459 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 57.463 0.74241 + 1041700000 0 0 0 214630000 226650000 0 0 0 199770000 0 400650000 0 0 0 0 3534 5375 3188 30609;30610;30611;30612 24132;24133;24134;24135 24135 4 AMPTLLAK Oxidation (M) 859.48372 0.48372479 5375 yes yes 0 1 0 By MS/MS 10 0 1 1 24.173 24.854 2 0.017951 25719 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.463 8.9023 + 203420000 0 0 0 0 0 0 0 0 0 0 0 203420000 0 0 0 3535 5375 3188 30613 24136 24136 6754 1 AMQAAGQIPATALLPTMTPDGLAVTPTPVPVVGSQMTR 3 Oxidation (M) 3835.9522 0.95221682 1202 P26368 U2AF2 Splicing factor U2AF 65 kDa subunit yes yes 0 3 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 2 1 1 1 2 93.113 93.207 3;4 3.1044E-41 108250 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.942 58.134 163900000 0 0 0 0 3175000 0 0 7434800 0 52712000 0 9509800 885830 4561100 85622000 3536 1202 3189 30614;30615;30616;30617;30618;30619;30620;30621;30622 24137;24138;24139 24138 1755;1756;1757 3 AMQADISQAAQILSSDPSR Oxidation (M) 2003.9582 0.95821812 1446 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 21 1 2 2 2 2 1 2 2 2 2 2 1 76.238 76.306 2;3 1.5756E-158 87863 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 206.63 190.69 897330000 0 0 0 19524000 70490000 77564000 96172000 92782000 27786000 95578000 106090000 118300000 77702000 79925000 35417000 3537 1446 3190 30623;30624;30625;30626;30627;30628;30629;30630;30631;30632;30633;30634;30635;30636;30637;30638;30639;30640;30641;30642;30643 24140;24141;24142;24143;24144;24145;24146;24147;24148;24149;24150;24151;24152;24153;24154;24155;24156 24148 2278 10 AMQADISQAAQILSSDPSR Unmodified 1987.9633 0.9633035 1446 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 82.106 82.188 2;3 1.2793E-46 95022 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 160.78 149.17 412180000 0 0 0 2620300 17976000 27825000 13827000 33620000 18200000 60377000 43483000 46206000 14732000 36504000 96811000 3538 1446 3190 30644;30645;30646;30647;30648;30649;30650;30651;30652;30653;30654;30655;30656;30657;30658;30659;30660;30661;30662;30663;30664;30665;30666;30667 24157;24158;24159;24160;24161;24162;24163;24164;24165;24166;24167;24168;24169 24157 10 AMQDAEVSK Oxidation (M) 993.44371 0.44371047 1399 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.8 3.66 1 3 11 2 1 1 1 1 1 1 1 1 1 1 1 1 1 12.976 12.828 2 0.0079076 4458 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 61.962 29.492 147280000 80446000 16342000 2654200 2180800 2332100 3566400 0 2489000 516260 4750000 7263800 7463800 4045600 5567400 7658200 3539 1399 3191 30668;30669;30670;30671;30672;30673;30674;30675;30676;30677;30678;30679;30680;30681;30682 24170;24171;24172;24173;24174;24175;24176;24177;24178;24179;24180;24181;24182 24179 2168 13 AMQDAEVSK Unmodified 977.4488 0.44879585 1399 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 14.623 10.575 2 0.018051 15816 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.113 46.809 25177000 25177000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3540 1399 3191 30683;30684;30685 24183;24184;24185 24184 3 AMQDPVFQLPTAGR Oxidation (M) 1545.761 0.76096229 3665 Q92805 GOLGA1 Golgin subfamily A member 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 75.369 75.424 2 1.6703E-05 87035 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 86.911 70.657 40866000 0 0 0 3490500 3462500 0 3635000 2428000 0 4212000 3943400 7666400 2288400 2609600 7130600 3541 3665 3192 30686;30687;30688;30689;30690;30691;30692;30693;30694;30695 24186;24187;24188;24189;24190;24191 24189 5201 5 AMQEALAK Unmodified 860.44259 0.44258826 437 O60841 EIF5B Eukaryotic translation initiation factor 5B yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 20.359 20.55 2 0.011082 20830 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 77.741 44.002 192350000 0 0 0 14370000 11752000 17001000 16706000 11354000 11085000 21088000 25872000 23926000 0 18266000 20930000 3542 437 3193 30696;30697;30698;30699;30700;30701;30702;30703;30704;30705;30706 24192;24193;24194;24195;24196;24197;24198;24199 24194 8 AMQEALAK Oxidation (M) 876.4375 0.43750288 437 O60841 EIF5B Eukaryotic translation initiation factor 5B yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 9.5329 9.3163 2 0.026059 7643 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 50.632 27.703 455830000 0 390000000 0 6043000 5396200 5376400 7149500 5487200 3419900 7571100 0 11817000 8426300 5138100 0 3543 437 3193 30707;30708;30709;30710;30711;30712;30713;30714;30715;30716;30717 24200;24201 24201 2 AMQEQLENYDFTK Oxidation (M) 1631.7137 0.71373732 4357 Q9H223 EHD4 EH domain-containing protein 4 yes yes 0 1 0 By MS/MS By MS/MS 6 4 1 1 1 1 58.546 55.283 2 3.7505E-07 70152 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.39 79.93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3544 4357 3194 30718;30719 24202;24203 24202 5818 2 AMQEQLENYDFTK Unmodified 1615.7188 0.7188227 4357 Q9H223 EHD4 EH domain-containing protein 4 yes yes 0 0 0 By MS/MS 2 0 1 1 70.508 64.692 2 0.040342 82189 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.887 55.022 27047000 0 27047000 0 0 0 0 0 0 0 0 0 0 0 0 0 3545 4357 3194 30720 24204 24204 0 AMQETVDALR Unmodified 1132.5547 0.55465791 3101 Q7Z4S6 KIF21A Kinesin-like protein KIF21A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 45.098 45.262 2 0.013695 49619 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.113 36.956 85725000 0 0 0 5971700 5367600 8937900 7751600 7450300 0 6827800 11040000 12024000 7658200 0 12695000 3546 3101 3195 30721;30722;30723;30724;30725;30726;30727;30728;30729;30730;30731 24205;24206;24207;24208;24209;24210;24211;24212;24213;24214 24208 10 AMQETVDALR Oxidation (M) 1148.5496 0.54957253 3101 Q7Z4S6 KIF21A Kinesin-like protein KIF21A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 32.366 32.467 2 0.0095092 35414 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 68.224 36.934 14374000 0 0 0 0 0 0 7314000 0 0 7059700 0 0 0 0 0 3547 3101 3195 30732;30733;30734 24215;24216;24217 24217 4711 1 AMQGAGTQER Unmodified 1047.4767 0.47674194 1100 P20073 ANXA7 Annexin A7 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By matching 10 0 14 1 1 2 1 2 1 1 2 1 1 1 6.8705 7.0101 2 0.0040176 4873 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 74.376 57.836 54589000 0 0 0 0 2024800 8387000 5909600 4400200 4774600 5371400 6195000 3424300 6216800 2988300 4896600 3548 1100 3196 30735;30736;30737;30738;30739;30740;30741;30742;30743;30744;30745;30746;30747;30748 24218;24219;24220 24218 3 AMQGLTGR Unmodified 832.42252 0.42252152 1202 P26368 U2AF2 Splicing factor U2AF 65 kDa subunit yes yes 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching 10 0 8 1 1 1 1 1 1 1 1 21.086 21.214 2 0.012232 21845 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 75.109 33.607 116680000 0 0 0 12809000 11956000 0 9118000 9815600 7368600 16285000 0 27114000 22214000 0 0 3549 1202 3197 30749;30750;30751;30752;30753;30754;30755;30756 24221;24222 24221 2 AMQGLTGRK Unmodified 960.51748 0.51748454 1202 P26368 U2AF2 Splicing factor U2AF 65 kDa subunit yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 12.641 12.859 2 0.031651 11188 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.143 48.17 101010000 0 0 0 0 12106000 10481000 0 0 0 0 13355000 16115000 19176000 13637000 16140000 3550 1202 3198 30757;30758;30759;30760;30761;30762;30763 24223;24224;24225 24224 1 AMQIQEQK Unmodified 974.48552 0.48551571 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 17.388 17.449 2 0.0044578 16753 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 112.37 7.2342 217810000 0 0 0 14878000 12711000 20034000 17790000 0 12266000 21989000 0 118140000 0 0 0 3551 4634 3199 30764;30765;30766;30767;30768;30769;30770 24226;24227;24228;24229;24230;24231 24230 5 AMQIQEQK Oxidation (M) 990.48043 0.48043033 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 2 1 2 1 1 2 1 2 2 1 1 7.0314 7.1459 2 0.0029906 5451 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 132.29 103.86 89427000 0 0 0 0 5667500 6109600 9036500 3849100 6041500 16096000 0 11919000 14155000 6673300 9879400 3552 4634 3199 30771;30772;30773;30774;30775;30776;30777;30778;30779;30780;30781;30782;30783;30784;30785;30786;30787 24232;24233;24234;24235;24236;24237;24238;24239;24240;24241;24242;24243;24244;24245 24240 6032 10 AMQNNAKPEQK Unmodified 1257.6136 0.61356977 2597 Q16186 ADRM1 Proteasomal ubiquitin receptor ADRM1 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 6.416 3.0714 2 0.0030069 4559 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 99.802 78.057 92564000 11405000 81159000 0 0 0 0 0 0 0 0 0 0 0 0 0 3553 2597 3200 30788;30789;30790 24246;24247 24246 2 AMQTVYLR Oxidation (M) 996.50625 0.50625115 379 O43913 ORC5 Origin recognition complex subunit 5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.487 32.675 2 0.0044636 35788 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 97.473 73.5 115190000 0 0 0 10069000 9685100 8182200 10071000 8778600 6754500 9935300 11057000 16342000 9504500 7835700 6978400 3554 379 3201 30791;30792;30793;30794;30795;30796;30797;30798;30799;30800;30801;30802 24248;24249;24250;24251;24252;24253;24254;24255;24256;24257;24258;24259 24249 487 12 AMQTVYLR Unmodified 980.51134 0.51133653 379 O43913 ORC5 Origin recognition complex subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 45.031 45.177 2 0.013207 50765 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 72.875 41.585 64997000 0 0 0 0 4955700 7494000 6721100 9215600 6536700 9394200 0 0 10354000 0 10326000 3555 379 3201 30803;30804;30805;30806;30807;30808;30809;30810 24260;24261;24262;24263;24264;24265 24262 6 AMSARAEAIK Unmodified 1046.5543 0.55426398 1529 P47914 RPL29 60S ribosomal protein L29 yes yes 0 0 1 By MS/MS 2 0 1 1 23.162 18.266 2 0.00059698 26049 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 121.5 75.822 82982000 82982000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3556 1529 3202 30811 24266 24266 1 AMSFCTSQSR Oxidation (M) 1189.4856 0.48559206 36 A8K2U0 A2ML1 Alpha-2-macroglobulin-like protein 1 yes yes 0 1 0 By MS/MS 10 0 1 1 16.722 16.586 2 0.010625 16551 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 49.715 45.359 2292800 0 0 0 2292800 0 0 0 0 0 0 0 0 0 0 0 3557 36 3203 30812 24267 24267 32 1 AMSLLGSR Unmodified 833.44292 0.44292261 3078 Q7Z333 SETX Probable helicase senataxin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 44.872 45.11 2 0.043141 50212 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 49.358 2.988 334050000 0 0 0 0 19468000 20713000 20008000 21553000 13938000 31057000 37468000 42827000 45933000 34340000 46742000 3558 3078 3204 30813;30814;30815;30816;30817;30818;30819;30820;30821;30822;30823 24268 24268 1 AMSTLVPQGGPVLCR Oxidation (M) 1600.8065 0.80653227 583 O94776 MTA2 Metastasis-associated protein MTA2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 66.11 66.238 2 5.7143E-06 74990 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 81.338 73.451 51105000 0 0 0 3416600 0 7210300 0 0 0 6063900 8369000 10255000 0 6616800 9173100 3559 583 3205 30824;30825;30826;30827;30828;30829;30830 24269;24270;24271;24272;24273;24274 24273 740 6 AMSTTSISSPQPGK Unmodified 1390.6762 0.67622961 4940 Q9UJU6 DBNL Drebrin-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 34.647 34.846 2 0.00032744 37229 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.342 64.75 84296000 0 0 0 4289900 3173100 0 3686600 4536700 3323800 6836300 12706000 10672000 7967700 6431000 20674000 3560 4940 3206 30831;30832;30833;30834;30835;30836;30837;30838;30839;30840;30841 24275;24276;24277;24278;24279;24280;24281;24282;24283;24284;24285 24277 11 AMSTTSISSPQPGK Oxidation (M) 1406.6711 0.67114423 4940 Q9UJU6 DBNL Drebrin-like protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 24.008 24.386 2 0.00038563 25347 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 66.262 53.647 13155000 0 0 0 0 0 0 2450800 2130900 0 0 0 4161400 0 0 4411900 3561 4940 3206 30842;30843;30844;30845;30846;30847 24286;24287;24288;24289;24290;24291 24291 6282 6 AMTEDGFLAVCSEAK Oxidation (M) 1643.7171 0.71710814 864 P08243 ASNS Asparagine synthetase [glutamine-hydrolyzing] yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 69.277 63.318 2 0.00013501 80786 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.64 89.26 205270000 3619700 199230000 2424700 0 0 0 0 0 0 0 0 0 0 0 0 3562 864 3207 30848;30849;30850 24292;24293 24292 1103 2 AMTEDGFLAVCSEAK Unmodified 1627.7222 0.72219352 864 P08243 ASNS Asparagine synthetase [glutamine-hydrolyzing] yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 3 1 76.251 71.389 2 2.2675E-29 90829 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 147.62 136.09 209870000 8188200 198430000 3250900 0 0 0 0 0 0 0 0 0 0 0 0 3563 864 3207 30851;30852;30853;30854;30855 24294;24295;24296 24294 2 AMTERQSEFTNFK Unmodified 1587.7351 0.73514147 246 O15056 SYNJ2 Synaptojanin-2 yes yes 0 0 1 By MS/MS 2 0 1 1 53.303 45.24 3 0.025589 62245 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 33.227 25.051 6828500 6828500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3564 246 3208 30856 24297 24297 1 AMTGSTPCSSMSNHTK Acetyl (Protein N-term) 1737.712 0.71203954 2507 Q15208 STK38 Serine/threonine-protein kinase 38 yes yes 1 0 0 By MS/MS 2 0 1 1 38.322 33.355 2 1.8498E-57 43581 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 203.61 191.75 29655000 0 29655000 0 0 0 0 0 0 0 0 0 0 0 0 0 3565 2507 3209 30857 24298 24298 1 AMTGVEQWPYR Oxidation (M) 1352.6183 0.6183208 1570 P49368 CCT3 T-complex protein 1 subunit gamma yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.094 55.226 2 7.4038E-74 62559 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 198.65 191.52 322500000 0 0 0 19922000 15701000 21919000 18216000 20810000 16156000 31778000 34176000 39996000 30982000 25578000 47269000 3566 1570 3210 30858;30859;30860;30861;30862;30863;30864;30865;30866;30867;30868;30869 24299;24300;24301;24302;24303;24304;24305;24306;24307;24308;24309;24310;24311 24305 2509 11 AMTGVEQWPYR Unmodified 1336.6234 0.62340617 1570 P49368 CCT3 T-complex protein 1 subunit gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.436 65.524 2 0.005026 74213 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.045 39.175 320180000 0 0 0 12561000 12623000 24258000 17372000 28445000 11071000 25085000 32020000 40426000 17981000 34328000 64010000 3567 1570 3210 30870;30871;30872;30873;30874;30875;30876;30877;30878;30879;30880;30881 24312;24313;24314;24315;24316;24317;24318;24319 24315 8 AMTILLEEAK Oxidation (M) 1133.6002 0.60021112 1766 P55265 ADAR Double-stranded RNA-specific adenosine deaminase yes yes 0 1 0 By MS/MS 2 0 1 1 59.102 55.299 2 0.038779 68756 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 53.327 34.522 5804100 0 0 5804100 0 0 0 0 0 0 0 0 0 0 0 0 3568 1766 3211 30882 24320 24320 1 AMTILLEEAK Unmodified 1117.6053 0.60529649 1766 P55265 ADAR Double-stranded RNA-specific adenosine deaminase yes yes 0 0 0 By MS/MS 2 0 1 1 76.451 73.689 2 0.0099927 89817 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 75.378 55.742 5175300 0 0 5175300 0 0 0 0 0 0 0 0 0 0 0 0 3569 1766 3211 30883 24321 24321 1 AMVAQPAEK Unmodified 943.4797 0.47970205 4275 Q9BZQ8 FAM129A Protein Niban yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 17.894 18.077 2 0.023437 18702 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.059 37.551 10232000 0 0 0 0 0 2297000 1215900 0 0 2602200 2331400 0 0 1785200 0 3570 4275 3212 30884;30885;30886;30887;30888 24322 24322 1 AMVASGSELGK Oxidation (M) 1064.5172 0.51720977 1748 P54819 AK2 Adenylate kinase 2, mitochondrial;Adenylate kinase 2, mitochondrial, N-terminally processed yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 2 2 1 2 2 1 1 1 1 19.125 19.23 2 0.0022289 19275 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 64.04 49.202 114290000 0 0 0 0 15912000 23440000 10877000 13322000 10996000 13415000 7745800 0 12205000 6381500 0 3571 1748 3213 30889;30890;30891;30892;30893;30894;30895;30896;30897;30898;30899;30900;30901 24323;24324;24325;24326;24327;24328;24329;24330;24331;24332;24333 24329 2839 10 AMVASGSELGK Unmodified 1048.5223 0.52229515 1748 P54819 AK2 Adenylate kinase 2, mitochondrial;Adenylate kinase 2, mitochondrial, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.835 30.027 2 0.002655 32371 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 66.692 45.164 189530000 0 0 0 10165000 6273800 15680000 15502000 12180000 9370100 18122000 22174000 20371000 11753000 12400000 35546000 3572 1748 3213 30902;30903;30904;30905;30906;30907;30908;30909;30910;30911;30912;30913 24334;24335;24336;24337;24338;24339;24340;24341;24342;24343 24337 8 AMVEFATLDR Oxidation (M) 1167.5594 0.55940893 3924 Q96MF7 NSMCE2 E3 SUMO-protein ligase NSE2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 59.426 59.611 2 0.0039635 67575 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 66.621 56.634 97641000 0 0 0 0 8473800 6977700 7879400 6648700 6995900 0 12557000 12992000 12487000 8498300 14131000 3573 3924 3214 30914;30915;30916;30917;30918;30919;30920;30921;30922;30923 24344;24345;24346;24347;24348;24349;24350;24351 24347 5419 8 AMVEYEIDLQK Oxidation (M) 1353.6486 0.64861787 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching 4.83 3.67 3 1 2 1 3 1 1 66.11 61.999 2 6.128E-05 79847 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.18 97.794 137880000 21761000 108380000 0 0 0 4455100 0 0 3285400 0 0 0 0 0 0 3574 894 3215 30924;30925;30926;30927;30928;30929 24352;24353;24354;24355;24356;24357 24355 1146 6 AMVEYEIDLQK Unmodified 1337.6537 0.65370325 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 2 2 76.051 70.404 2 0.00033739 90376 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 128.36 110.93 72852000 29725000 43127000 0 0 0 0 0 0 0 0 0 0 0 0 0 3575 894 3215 30930;30931;30932;30933 24358;24359;24360 24360 2 AMVGFSGVMK Unmodified 1025.5038 0.50380831 1522 P47712 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 65.618 65.774 2 0.033516 74491 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.075 23.384 43698000 0 0 0 0 1613300 3438800 3295400 4898000 0 5017900 5141200 4207600 3333900 4377300 8374400 3576 1522 3216 30934;30935;30936;30937;30938;30939;30940;30941;30942;30943 24361;24362 24362 2 AMVLDLR Unmodified 816.45276 0.45275902 4987 Q9UL46 PSME2 Proteasome activator complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.915 62.015 2 0.0174 69612 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 114.02 73.102 245670000 0 0 0 8471100 5940900 25943000 11673000 11482000 7092700 23188000 29554000 26201000 13087000 19360000 63677000 3577 4987 3217 30944;30945;30946;30947;30948;30949;30950;30951;30952;30953;30954;30955 24363;24364;24365;24366;24367;24368;24369 24366 6 AMVLDLR Oxidation (M) 832.44767 0.44767364 4987 Q9UL46 PSME2 Proteasome activator complex subunit 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 45.966 46.204 2 0.047808 50663 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.025 25.838 294860000 0 0 0 18111000 0 33593000 22797000 0 18124000 33046000 33855000 36294000 24905000 24090000 50045000 3578 4987 3217 30956;30957;30958;30959;30960;30961;30962;30963;30964;30965 24370 24370 1 AMVSEFLK Acetyl (Protein N-term);Oxidation (M) 981.48412 0.48411873 773 P04083 ANXA1 Annexin A1 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.75 3.85 16 4 28 7 8 5 3 2 2 2 2 2 2 3 3 2 2 3 81.468 80.159 1;2 0.00089768 92780 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.662 46.919 2199500000 82486000 1688500000 66203000 17231000 11436000 21858000 25280000 35191000 10110000 20015000 41993000 50189000 20488000 25830000 82680000 3579 773 3218 30966;30967;30968;30969;30970;30971;30972;30973;30974;30975;30976;30977;30978;30979;30980;30981;30982;30983;30984;30985;30986;30987;30988;30989;30990;30991;30992;30993;30994;30995;30996;30997;30998;30999;31000;31001;31002;31003;31004;31005;31006;31007;31008;31009;31010;31011;31012;31013 24371;24372;24373;24374;24375;24376;24377;24378;24379;24380;24381;24382;24383;24384;24385;24386;24387;24388;24389;24390;24391;24392;24393;24394;24395;24396;24397;24398;24399;24400;24401;24402;24403;24404;24405;24406;24407;24408;24409 24381 927 20 AMVSEFLK Acetyl (Protein N-term) 965.4892 0.4892041 773 P04083 ANXA1 Annexin A1 yes yes 1 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.52 3.12 1 3 1 22 2 2 1 2 2 1 2 2 2 1 2 2 2 2 2 93.049 92.611 1;2 0.0028567 113039 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.72 83.988 4014600000 132000000 3694300000 15752000 5307100 4179900 3015000 5529200 17652000 4862300 6128300 18529000 16353000 7100200 13573000 70279000 3580 773 3218 31014;31015;31016;31017;31018;31019;31020;31021;31022;31023;31024;31025;31026;31027;31028;31029;31030;31031;31032;31033;31034;31035;31036;31037;31038;31039;31040 24410;24411;24412;24413;24414;24415;24416;24417;24418;24419;24420;24421;24422;24423;24424;24425 24414 11 AMVSNAQLDNEK Unmodified 1318.6187 0.61871473 2661;5259 Q32MZ4;Q9Y608 LRRFIP1;LRRFIP2 Leucine-rich repeat flightless-interacting protein 1;Leucine-rich repeat flightless-interacting protein 2 no no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31.498 30.875 2 3.3255E-127 39092 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 243.65 227.77 239960000 4785400 52066000 0 7573300 8594600 12618000 9327500 9462000 6931200 11435000 21138000 30022000 14259000 18050000 33703000 3581 2661;5259 3219 31041;31042;31043;31044;31045;31046;31047;31048;31049;31050;31051;31052;31053;31054 24426;24427;24428;24429;24430;24431;24432;24433;24434;24435;24436;24437;24438;24439 24430 14 AMVSNAQLDNEK Oxidation (M) 1334.6136 0.61362935 2661;5259 Q32MZ4;Q9Y608 LRRFIP1;LRRFIP2 Leucine-rich repeat flightless-interacting protein 1;Leucine-rich repeat flightless-interacting protein 2 no no 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 20.619 20.126 2 1.4454E-05 20651 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 103.26 89.801 55963000 5432400 0 0 6281600 0 4304500 0 0 0 3969000 12632000 14503000 8840500 0 0 3582 2661;5259 3219 31055;31056;31057;31058;31059;31060;31061;31062 24440;24441;24442;24443;24444;24445;24446 24445 4329 7 AMYSAELEK Oxidation (M) 1056.4798 0.47976163 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 29.268 29.361 2 0.0034036 31808 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 81.548 55.811 63204000 0 0 0 9216000 6879300 5178300 10308000 12583000 0 0 8627600 0 0 0 10411000 3583 2556 3220 31063;31064;31065;31066;31067;31068;31069 24447;24448;24449;24450;24451;24452;24453 24448 4190 7 AMYSAELEK Unmodified 1040.4848 0.48484701 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 39.15 39.562 2 0.015052 43396 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.722 39.031 127080000 0 0 0 0 0 0 0 0 13882000 13069000 22021000 19074000 18174000 13820000 27041000 3584 2556 3220 31070;31071;31072;31073;31074;31075;31076 24454;24455;24456;24457 24457 4 ANAARTQLETYK Unmodified 1364.7048 0.70482762 4937 Q9UJC3 HOOK1 Protein Hook homolog 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 29.021 24.609 3 0.0033322 34478 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.829 33.727 39555000 35362000 0 4192400 0 0 0 0 0 0 0 0 0 0 0 0 3585 4937 3221 31077;31078 24458 24458 1 ANAEELANNLK Unmodified 1185.599 0.59896556 3199 Q86XP3 DDX42 ATP-dependent RNA helicase DDX42 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 46.932 46.643 2 1.8705E-06 59051 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 150.36 95.585 549160000 0 403810000 0 7785500 7378200 13048000 11284000 8989600 6105100 14663000 14712000 16333000 14401000 10219000 20427000 3586 3199 3222 31079;31080;31081;31082;31083;31084;31085;31086;31087;31088;31089;31090;31091;31092 24459;24460;24461;24462;24463;24464;24465;24466;24467;24468;24469;24470;24471;24472;24473 24462 15 ANAEEMTK Unmodified 892.39603 0.396032 2314 Q13547 HDAC1 Histone deacetylase 1 yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 8.5636 5.1205 2 0.027071 8785 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.77 45.032 34959000 7068200 27891000 0 0 0 0 0 0 0 0 0 0 0 0 0 3587 2314 3223 31093;31094 24474 24474 1 ANAEIAQVR Unmodified 970.51959 0.51959303 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 25.102 25.323 2 0.011336 26890 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 62.969 29.156 44953000 0 0 0 4364200 0 3235300 4053700 3976800 0 4114500 5836900 7611300 6243200 5517000 0 3588 645 3224 31095;31096;31097;31098;31099;31100;31101;31102;31103 24475;24476;24477;24478 24475 3 ANAERLK Unmodified 800.45045 0.45045083 4502 Q9HBM1 SPC25 Kinetochore protein Spc25 yes yes 0 0 1 By MS/MS 2 0 1 1 2.1111 -0.041416 2 0.041972 1308 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 147.69 87.399 75920000 0 0 75920000 0 0 0 0 0 0 0 0 0 0 0 0 3589 4502 3225 31104 24479 24479 0 ANAHFILK Unmodified 912.51814 0.51813647 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37.371 36.725 2 0.017225 53675 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.777 55.576 212990000 67690000 0 16311000 5775000 6144400 13351000 7751300 9939900 5588100 10004000 12311000 13492000 11230000 10796000 22602000 3590 619 3226 31105;31106;31107;31108;31109;31110;31111;31112;31113;31114;31115;31116;31117;31118 24480;24481;24482;24483;24484;24485;24486;24487 24483 6 ANAIGRGAK Unmodified 856.4879 0.48789897 219 O14818 PSMA7 Proteasome subunit alpha type-7 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 5.8295 2.5206 2 0.001558 5381 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 151.17 70.796 1772400000 1714500000 57891000 0 0 0 0 0 0 0 0 0 0 0 0 0 3591 219 3227 31119;31120 24488 24488 1 ANALHATNNLQIIPDFSLK Unmodified 2079.1113 0.11128837 4825 Q9P2R3 ANKFY1 Rabankyrin-5 yes yes 0 0 0 By MS/MS 2 0 1 1 92.709 84.579 3 6.1721E-05 109653 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 44.641 29.049 22279000 22279000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3592 4825 3228 31121 24489 24489 1 ANAQAAALYK Unmodified 1019.54 0.53999412 1407 P40121 CAPG Macrophage-capping protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.65 3.66 1 3 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 33.263 32.657 2 5.1818E-06 35453 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145.34 118.2 1391900000 72283000 903130000 4905800 19601000 14327000 50603000 19819000 20476000 13004000 40628000 48280000 53994000 23140000 30334000 77390000 3593 1407 3229 31122;31123;31124;31125;31126;31127;31128;31129;31130;31131;31132;31133;31134;31135;31136;31137;31138 24490;24491;24492;24493;24494;24495;24496;24497;24498;24499;24500;24501;24502;24503;24504;24505;24506;24507;24508;24509;24510;24511;24512;24513 24494 24 ANASNSPSSLRLLNEPQK Unmodified 1924.9967 0.99665254 2777 Q5T5X7 BEND3 BEN domain-containing protein 3 yes yes 0 0 1 By MS/MS 2 0 1 1 63.343 55.075 3 0.0042632 74216 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 38.824 32.407 15938000 15938000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3594 2777 3230 31139 24514 24514 1 ANDDIIVNWVNR Unmodified 1427.7157 0.71572665 986 P13797 PLS3 Plastin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 81.151 80.956 2 1.9521E-08 93245 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 135.43 105.69 296170000 0 2383800 0 4996900 6510300 32658000 12853000 11581000 14122000 24428000 30135000 31724000 13223000 26799000 84757000 3595 986 3231 31140;31141;31142;31143;31144;31145;31146;31147;31148;31149;31150;31151;31152 24515;24516;24517;24518;24519;24520;24521;24522;24523;24524;24525;24526 24518 12 ANDDIIVNWVNRTLSEAGK Unmodified 2114.0756 0.075631144 986 P13797 PLS3 Plastin-3 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 98.174 92.783 3 3.134E-05 116530 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.073 65.092 19672000 8639100 11033000 0 0 0 0 0 0 0 0 0 0 0 0 0 3596 986 3232 31153;31154;31155 24527;24528 24528 2 ANDDLADAGLEK Unmodified 1230.5728 0.57281039 4498 Q9HB90;Q9NQL2 RRAGC;RRAGD Ras-related GTP-binding protein C;Ras-related GTP-binding protein D yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 40.53 40.729 2 0.004576 45172 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 72.096 45.493 28255000 0 0 0 0 1560500 4485700 0 0 0 4368400 5584000 0 0 3402300 8854400 3597 4498 3233 31156;31157;31158;31159;31160;31161 24529;24530;24531;24532 24531 3 ANDEANQSDTSVSLSEPK Unmodified 1890.8443 0.8442938 680 O95684 FGFR1OP FGFR1 oncogene partner yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 39.368 39.573 2 6.0645E-31 43663 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 117.92 112.53 44313000 0 0 0 2862100 3904800 0 3243400 0 0 4702500 7616100 5793300 5407700 3746200 7037200 3598 680 3234 31162;31163;31164;31165;31166;31167;31168;31169;31170 24533;24534;24535;24536;24537;24538;24539;24540;24541 24539 9 ANDGEGGDEEAGTEEAVPR Unmodified 1901.7875 0.78750721 4383 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 1 2 2 1 2 2 2 2 2 2 2 31.778 32.021 2;3 1.1041E-124 34830 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 244.44 238.21 508540000 0 0 0 23319000 20847000 44082000 36959000 26513000 25286000 53365000 70140000 73185000 50667000 28640000 55535000 3599 4383 3235 31171;31172;31173;31174;31175;31176;31177;31178;31179;31180;31181;31182;31183;31184;31185;31186;31187;31188;31189;31190;31191 24542;24543;24544;24545;24546;24547;24548;24549;24550;24551;24552;24553;24554;24555;24556;24557;24558;24559;24560 24543 18 ANDGEGGDEEAGTEEAVPRR Unmodified 2057.8886 0.88861823 4383 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.095 26.296 3 1.1285E-21 27983 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 97.384 96.351 427780000 0 0 0 25057000 28729000 28617000 22961000 23783000 30429000 40160000 65792000 60121000 41077000 29319000 31731000 3600 4383 3236 31192;31193;31194;31195;31196;31197;31198;31199;31200;31201;31202;31203 24561;24562;24563;24564;24565;24566;24567;24568;24569;24570;24571;24572 24562 12 ANDGGLAAGAPAMHMASYGPEPCTDNSDSLIAK 2 Oxidation (M) 3320.4384 0.43839046 372 O43823 AKAP8 A-kinase anchor protein 8 yes yes 0 2 0 By MS/MS By MS/MS 10 0 2 1 1 64.853 65.141 3 1.2855E-26 74519 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 57.543 55.29 20709000 0 0 0 0 0 0 0 0 0 9086600 0 11622000 0 0 0 3601 372 3237 31204;31205 24573;24574 24573 469;470 2 ANDGGLAAGAPAMHMASYGPEPCTDNSDSLIAK Oxidation (M) 3304.4435 0.44347584 372 O43823 AKAP8 A-kinase anchor protein 8 yes yes 0 1 0 By MS/MS 2 0 1 1 76.745 71.908 3 2.6642E-06 89782 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 42.301 33.905 46296000 0 46296000 0 0 0 0 0 0 0 0 0 0 0 0 0 3602 372 3237 31206 24575 24575 469;470 1 ANDGGLAAGAPAMHMASYGPEPCTDNSDSLIAK Unmodified 3288.4486 0.44856122 372 O43823 AKAP8 A-kinase anchor protein 8 yes yes 0 0 0 By MS/MS By MS/MS 5 3.56 1 1 1 2 1 80.456 77.876 3 8.3528E-52 96629 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.099 85.129 63906000 0 51947000 0 0 0 0 0 0 0 0 0 0 0 0 11959000 3603 372 3237 31207;31208;31209 24576;24577;24578 24576 3 ANDLTHSLSSYLK Unmodified 1447.7307 0.73070802 4090 Q9BQ75 CMSS1 Protein CMSS1 yes yes 0 0 0 By MS/MS 2 0 1 1 79.621 71.491 3 0.0014817 93828 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.482 43.604 49436000 49436000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3604 4090 3238 31210 24579 24579 1 ANDQFLESQR Unmodified 1206.5629 0.56291441 2510 Q15276 RABEP1 Rab GTPase-binding effector protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 35.229 35.493 2 0.0071285 38641 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 63.216 50.99 61869000 0 0 0 0 3242900 4228900 0 3321500 0 7512300 7033600 16598000 0 7959700 11972000 3605 2510 3239 31211;31212;31213;31214;31215;31216;31217;31218 24580 24580 1 ANDTTFGLAAGVFTR Unmodified 1539.7682 0.76815616 1561 P49189 ALDH9A1 4-trimethylaminobutyraldehyde dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 83.849 84.043 2 9.7764E-05 96991 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.069 60.31 13762000 0 0 0 0 0 0 0 0 0 0 4795200 0 0 0 8966700 3606 1561 3240 31219;31220 24581;24582 24581 2 ANEAGGQVGPEAPR Unmodified 1351.648 0.64804102 3321 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 12.651 12.94 3 0.040537 11669 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 25.718 3.3967 83287000 0 0 0 0 0 0 0 0 32788000 0 0 0 0 0 50498000 3607 3321 3241 31221;31222 24583;24584 24583 0 ANEDAVPLCMSADFPR Unmodified 1791.792 0.79200442 4282 Q9C0B1 FTO Alpha-ketoglutarate-dependent dioxygenase FTO yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 80.753 80.879 2 0.0062166 92748 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 58.04 43.35 25607000 0 0 0 0 0 1949600 0 0 0 3074300 5659900 0 0 4406300 10516000 3608 4282 3242 31223;31224;31225;31226;31227 24585 24585 1 ANELFYLSHK Unmodified 1220.619 0.61897272 2226 Q13042 CDC16 Cell division cycle protein 16 homolog yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.54 3.69 4 9 2 1 1 1 1 1 1 1 1 2 1 60.524 58.694 2;3 0.00010274 81375 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 169.65 141.91 364050000 143770000 18629000 38905000 0 0 17867000 12988000 0 9588800 0 14740000 23377000 21837000 31119000 31235000 3609 2226 3243 31228;31229;31230;31231;31232;31233;31234;31235;31236;31237;31238;31239;31240 24586;24587;24588;24589;24590;24591;24592;24593;24594;24595 24588 7 ANELLLSTGMPGSFLIR Oxidation (M) 1833.9659 0.96586969 4430 Q9H788 SH2D4A SH2 domain-containing protein 4A yes yes 0 1 0 By MS/MS 10 0 1 1 89.367 89.51 2 0.0013425 103621 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.915 32.05 1919700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1919700 3610 4430 3244 31241 24596 24596 5880 1 ANELLQR Unmodified 842.46102 0.46101552 533 O75694 NUP155 Nuclear pore complex protein Nup155 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 25.739 25.896 2 0.023433 27550 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 85.359 1.2959 354820000 0 0 0 18582000 18584000 39060000 25263000 15272000 19360000 43039000 49033000 57782000 29336000 39511000 0 3611 533 3245 31242;31243;31244;31245;31246;31247;31248;31249;31250;31251;31252 24597;24598;24599;24600;24601 24597 4 ANELLQVIDSSMK Oxidation (M) 1462.7337 0.73374448 4946 Q9UJX5 ANAPC4 Anaphase-promoting complex subunit 4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.918 80.021 2 3.2445E-08 92609 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 103.34 61.802 40843000 0 0 0 0 2094300 3779300 2862100 2438400 2128100 5970000 4141900 4150900 3151700 3719400 6406900 3612 4946 3246 31253;31254;31255;31256;31257;31258;31259;31260;31261;31262;31263 24602;24603;24604;24605;24606;24607;24608;24609;24610;24611;24612 24611 6292 11 ANELLQVIDSSMK Unmodified 1446.7388 0.73882986 4946 Q9UJX5 ANAPC4 Anaphase-promoting complex subunit 4 yes yes 0 0 0 By MS/MS 10 0 1 1 88.226 88.376 2 0.00066463 102301 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.313 64.285 3300100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3300100 3613 4946 3246 31264 24613 24613 1 ANELPQPPVPEPANAGK Unmodified 1727.8842 0.88424855 1977 P78347 GTF2I General transcription factor II-I yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.53 2.01 1 18 1 2 2 2 2 1 2 1 2 1 2 1 67.483 67.763 2;3 1.6027E-96 74896 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 190.78 179.57 779350000 24948000 0 0 73255000 57653000 71616000 65955000 44239000 50155000 71899000 90697000 84355000 84994000 59584000 0 3614 1977 3247 31265;31266;31267;31268;31269;31270;31271;31272;31273;31274;31275;31276;31277;31278;31279;31280;31281;31282;31283 24614;24615;24616;24617;24618;24619;24620;24621;24622;24623;24624;24625;24626;24627;24628;24629;24630;24631;24632;24633;24634;24635;24636;24637;24638;24639;24640;24641 24630 23 ANELPQPPVPEPANAGKR Unmodified 1883.9854 0.98535957 1977 P78347 GTF2I General transcription factor II-I yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 58.025 58.412 3 0.00029829 66532 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 35.133 26.314 56623000 0 0 0 0 0 0 0 0 0 0 0 27018000 12106000 8474800 9024300 3615 1977 3248 31284;31285;31286;31287;31288 24642;24643;24644;24645;24646;24647;24648;24649 24648 8 ANENASFLQK Unmodified 1120.5513 0.55128709 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 36.226 34.769 2 0.00040335 44282 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.81 96.864 323580000 4603700 226420000 1056200 8108400 7450900 10262000 10917000 6602900 10892000 12863000 15295000 9116200 0 0 0 3616 1286 3249 31289;31290;31291;31292;31293;31294;31295;31296;31297;31298;31299;31300;31301 24650;24651;24652;24653;24654;24655;24656 24652 7 ANENHGSPREEASLLSHSPGTSNQSQPCSPK Acetyl (Protein N-term) 3344.5076 0.50760773 4405 Q9H4Z3 PCIF1 Phosphorylated CTD-interacting factor 1 yes yes 1 0 1 By MS/MS 2 0 1 1 52.333 48.412 4 2.2721E-10 60775 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 48.305 46.375 11809000 0 0 11809000 0 0 0 0 0 0 0 0 0 0 0 0 3617 4405 3250 31302 24657 24657 1 ANENSNIQVLSER Unmodified 1472.7219 0.72193424 2974 Q6UN15 FIP1L1 Pre-mRNA 3'-end-processing factor FIP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.392 46.559 2 1.1458E-12 52329 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 128.01 108.77 128940000 0 0 0 7172600 7934700 8258900 8360600 6618100 8914100 12130000 10683000 17655000 12952000 9178500 19084000 3618 2974 3251 31303;31304;31305;31306;31307;31308;31309;31310;31311;31312;31313;31314 24658;24659;24660;24661;24662;24663;24664;24665;24666;24667;24668;24669 24659 12 ANEPNHVELGRK Unmodified 1362.7004 0.70041094 4805 Q9P253 VPS18 Vacuolar protein sorting-associated protein 18 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 15.361 15.031 3 0.0042996 23315 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 59.975 52.195 135810000 77464000 0 0 6560000 2276600 6358800 5477600 4981800 2922600 7810400 9351900 0 5314100 7294500 0 3619 4805 3252 31315;31316;31317;31318;31319;31320;31321;31322;31323;31324;31325 24670;24671;24672;24673;24674;24675;24676;24677 24674 8 ANEPTHFTVDCTEAGEGDVSVGIK Unmodified 2532.1438 0.14384664 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 74.778 68.135 3 0.00017424 87858 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.301 43.309 43900000 23908000 19992000 0 0 0 0 0 0 0 0 0 0 0 0 0 3620 487 3253 31326;31327 24678;24679;24680 24679 2 ANEVDRMVLVGDVK Unmodified 1543.8028 0.8028271 1818;957 P60891;P11908 PRPS1;PRPS2 Ribose-phosphate pyrophosphokinase 1;Ribose-phosphate pyrophosphokinase 2 no no 0 0 1 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 2 2 1 72.146 66.122 2;3 0.00039434 85185 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.044 54.626 649180000 123080000 310720000 215370000 0 0 0 0 0 0 0 0 0 0 0 0 3621 1818;957 3254 31328;31329;31330;31331;31332 24681;24682;24683;24684;24685;24686;24687;24688;24689 24681 8 ANEVEQMIR Unmodified 1088.5284 0.52844316 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 47.825 47.935 2 0.012915 53841 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 60.589 43.296 81768000 0 0 0 4856400 5202900 8527200 6285800 5064700 4261100 10811000 7486100 0 6587200 7901300 14784000 3622 2392 3255 31333;31334;31335;31336;31337;31338;31339;31340;31341;31342;31343 24690;24691 24690 2 ANEVISK Unmodified 759.41267 0.41266834 1641 P50990 CCT8 T-complex protein 1 subunit theta yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.74 2 1 2 11 2 3 1 1 1 1 1 1 1 1 1 1 1 22.128 21.931 2 0.020013 93522 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 113.5 24.13 938580000 87039000 715610000 0 12063000 11926000 20624000 16704000 15394000 9874400 6753100 0 12437000 9547800 5760400 14844000 3623 1641 3256 31344;31345;31346;31347;31348;31349;31350;31351;31352;31353;31354;31355;31356;31357;31358;31359 24692;24693;24694;24695;24696;24697;24698;24699;24700;24701;24702;24703 24701 12 ANEVLENLTQGK Unmodified 1314.6779 0.67794416 3079 Q7Z392 TRAPPC11 Trafficking protein particle complex subunit 11 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 66.64 61.328 2 0.00017224 78677 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 142 67.619 42106000 0 42106000 0 0 0 0 0 0 0 0 0 0 0 0 0 3624 3079 3257 31360;31361 24704 24704 0 ANFENLAK Unmodified 905.46068 0.46068117 2399 Q14247 CTTN Src substrate cortactin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.498 37.678 2 0.047929 40864 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 47.657 4.6572 557400000 0 0 0 25020000 35213000 30379000 35233000 33741000 27831000 48102000 61491000 96788000 46732000 35421000 81452000 3625 2399 3258 31362;31363;31364;31365;31366;31367;31368;31369;31370;31371;31372;31373 24705;24706 24706 1 ANFIEADK Unmodified 906.4447 0.44469675 5276 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 30.595 31.037 2 0.017697 33863 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 65.246 43.01 24106000 0 0 0 0 0 0 0 0 0 6481400 9860300 0 0 0 7764300 3626 5276 3259 31374;31375;31376 24707 24707 1 ANFSLPEK Unmodified 904.46543 0.46543219 2645 Q1KMD3 HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 52.455 46.536 2 0.0060093 60443 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.1 76.412 242730000 6593300 230470000 5665200 0 0 0 0 0 0 0 0 0 0 0 0 3627 2645 3260 31377;31378;31379 24708 24708 1 ANFTLPDVGDFLDEVLFIELQREEADK Unmodified 3122.5448 0.54481131 4162 Q9BUJ2 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 104.62 98.185 3 3.9126E-39 123576 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.59 95.69 25192000 21552000 3639600 0 0 0 0 0 0 0 0 0 0 0 0 0 3628 4162 3261 31380;31381 24709;24710 24710 2 ANGGGALVENTTTGISR Unmodified 1616.8118 0.81181188 3766 Q96BW5 PTER Phosphotriesterase-related protein yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 46.132 46.723 2 0.015396 51470 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.825 30.853 6503000 0 0 0 0 0 0 0 0 0 0 3365100 0 0 0 3137900 3629 3766 3262 31382;31383 24711 24711 0 ANGGGALVENTTTGISRDTQTLK Unmodified 2303.1717 0.17171637 3766 Q96BW5 PTER Phosphotriesterase-related protein yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 66.922 62.095 3 0.010456 79748 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 20.24 11.531 34258000 0 28937000 5321600 0 0 0 0 0 0 0 0 0 0 0 0 3630 3766 3263 31384;31385 24712;24713 24712 2 ANGHLLLNSEK Unmodified 1194.6357 0.63568542 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 2 1 2 1 1 1 1 2 2 27.376 27.625 2;3 0.00029424 28216 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.479 55.521 132310000 0 0 0 7232100 0 17368000 14495000 2569700 8105700 3459600 6232200 33459000 0 0 39392000 3631 4819 3264 31386;31387;31388;31389;31390;31391;31392;31393;31394;31395;31396;31397;31398 24714;24715;24716;24717;24718;24719 24716 6 ANGSRGAFCEVRPDDK Unmodified 1777.8166 0.81657969 405 O60502 MGEA5 Protein O-GlcNAcase yes yes 0 0 2 By MS/MS 2 0 1 1 33.889 27.658 3 0.0028794 38794 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.977 39.948 18886000 18886000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3632 405 3265 31399 24720;24721 24721 2 ANGTSALTAQNGK Unmodified 1231.6157 0.61567826 2458 Q14978 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching 8.5 3.12 3 13 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 15.859 15.335 2 1.126E-12 15242 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 128.52 115.9 181090000 5910900 5451600 4018800 8629800 5441900 7931500 15712000 11712000 4782300 11377000 21313000 26124000 15477000 14832000 22378000 3633 2458 3266 31400;31401;31402;31403;31404;31405;31406;31407;31408;31409;31410;31411;31412;31413;31414;31415 24722;24723;24724;24725;24726;24727;24728;24729;24730;24731 24728 4 ANGTTVHVGIHPSK Unmodified 1416.7474 0.74736113 1843 P61254;Q9UNX3 RPL26;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.92 3.43 5 2 19 4 1 2 1 1 1 1 2 1 2 2 1 2 2 3 26.052 25.177 2;3 4.2858E-08 25806 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 84.753 65.013 675110000 187940000 8172400 44622000 12094000 14109000 13972000 13515000 29251000 14297000 31718000 47140000 44007000 65111000 48992000 100170000 3634 1843 3267 31416;31417;31418;31419;31420;31421;31422;31423;31424;31425;31426;31427;31428;31429;31430;31431;31432;31433;31434;31435;31436;31437;31438;31439;31440;31441 24732;24733;24734;24735;24736;24737;24738;24739;24740;24741;24742;24743;24744;24745;24746;24747;24748;24749;24750;24751;24752;24753;24754;24755;24756;24757;24758;24759;24760;24761;24762;24763;24764 24735 30 ANHEEVLAAGK Unmodified 1137.5778 0.57783619 728 P00491 PNP Purine nucleoside phosphorylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.29 3.67 4 2 11 1 3 2 1 2 1 2 1 1 1 1 1 17.641 16.491 2;3 7.5908E-19 22372 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 204.5 125.03 921760000 37293000 530680000 290490000 0 1422500 4873900 696880 6641100 2862400 2065400 9747100 0 0 11665000 23330000 3635 728 3268 31442;31443;31444;31445;31446;31447;31448;31449;31450;31451;31452;31453;31454;31455;31456;31457;31458 24765;24766;24767;24768;24769;24770;24771;24772;24773;24774;24775;24776;24777;24778 24767 12 ANHEGSWPSHGTR Unmodified 1434.6389 0.63887332 183 O14497 ARID1A AT-rich interactive domain-containing protein 1A yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 11.428 11.636 3 0.028203 9644 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 27.005 20.868 12249000 0 0 0 0 0 0 1239300 2031300 0 1932300 0 1738500 0 1939300 3368400 3636 183 3269 31459;31460;31461;31462;31463;31464 24779 24779 1 ANHPMDAEVTK Oxidation (M) 1227.5554 0.55538619 689 O95782 AP2A1 AP-2 complex subunit alpha-1 yes yes 0 1 0 By MS/MS 2.75 0.433 1 3 4 9.1212 5.7857 2;3 0.00079575 8346 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.442 69.287 62770000 0 62770000 0 0 0 0 0 0 0 0 0 0 0 0 0 3637 689 3270 31465;31466;31467;31468 24780;24781;24782 24780 835 2 ANHPMDAEVTK Unmodified 1211.5605 0.56047157 689 O95782 AP2A1 AP-2 complex subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 5.78 3.79 3 2 4 4 1 1 1 1 1 17.035 15.266 2;3 0.00069071 20086 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.43 83.734 270980000 0 208080000 3780300 9169000 0 0 0 6760300 0 0 0 15223000 0 0 27965000 3638 689 3270 31469;31470;31471;31472;31473;31474;31475;31476;31477 24783;24784;24785;24786;24787 24783 3 ANHSMAVK Unmodified 856.42252 0.42252152 2742 Q5JUR7 TEX30 Testis-expressed sequence 30 protein yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 6.4963 3.6362 2 0.021654 7105 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 141.23 106.03 64025000 55451000 0 8574100 0 0 0 0 0 0 0 0 0 0 0 0 3639 2742 3271 31478;31479 24788 24788 0 ANIAVQR Acetyl (Protein N-term) 812.45045 0.45045083 1832 P61086 UBE2K Ubiquitin-conjugating enzyme E2 K yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.25 2.49 1 11 1 1 1 1 1 1 1 1 1 1 1 1 44.564 45.155 2 0.0084231 43937 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 79.454 56.831 328900000 3023800 0 0 16031000 16421000 47233000 25433000 21810000 15516000 41061000 42201000 27226000 0 28562000 44386000 3640 1832 3272 31480;31481;31482;31483;31484;31485;31486;31487;31488;31489;31490;31491 24789;24790;24791;24792;24793;24794;24795 24789 7 ANIAVQRIK Acetyl (Protein N-term) 1053.6295 0.62947783 1832 P61086 UBE2K Ubiquitin-conjugating enzyme E2 K yes yes 1 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 58.026 52.048 2 0.0044728 65215 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 100.19 77.169 212410000 155100000 49167000 8140700 0 0 0 0 0 0 0 0 0 0 0 0 3641 1832 3273 31492;31493;31494 24796;24797;24798 24798 3 ANILEDVSLDELK Unmodified 1457.7613 0.76133944 4641 Q9NU22 MDN1 Midasin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 86.514 86.647 2 0.00036521 100183 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.979 67.888 7716800 0 0 0 0 0 0 0 0 0 3010300 0 0 0 0 4706500 3642 4641 3274 31495;31496;31497 24799;24800;24801 24800 3 ANILGLAAGQR Unmodified 1082.6196 0.61964142 2449 Q14807 KIF22 Kinesin-like protein KIF22 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.464 65.552 2 0.0058801 74742 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 57.96 46.6 73687000 0 0 0 2984300 5572100 5159600 6610400 4763700 4373900 5783000 7594700 8310000 8944500 5497600 8092900 3643 2449 3275 31498;31499;31500;31501;31502;31503;31504;31505;31506;31507;31508;31509 24802;24803;24804;24805;24806;24807;24808;24809;24810;24811;24812 24805 10 ANILTNR Unmodified 800.45045 0.45045083 4543 Q9NPA3 MID1IP1 Mid1-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 24.332 24.553 2 0.049912 24749 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.306 24.157 60483000 0 0 0 0 5684600 7167800 0 0 4230600 7417000 8156700 0 8746600 7439700 11640000 3644 4543 3276 31510;31511;31512;31513;31514;31515;31516;31517 24813 24813 1 ANINIEK Unmodified 800.43922 0.43921744 1830 P61026 RAB10 Ras-related protein Rab-10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 9.33 2.21 1 11 1 1 1 1 1 1 1 2 1 1 1 22.741 22.61 2 0.023341 23177 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 102.3 27.027 1376300000 0 465940000 0 56151000 0 68688000 80770000 75321000 60465000 117870000 172960000 175700000 100600000 1860600 0 3645 1830 3277 31518;31519;31520;31521;31522;31523;31524;31525;31526;31527;31528;31529 24814;24815;24816;24817;24818;24819;24820;24821;24822;24823 24822 9 ANINVENAFFTLAR Unmodified 1578.8154 0.8154407 1824 P61006 RAB8A Ras-related protein Rab-8A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 90.545 90.617 2 4.8153E-05 105160 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 103.34 91.128 53210000 0 0 0 837910 1776600 2362900 2365500 3792000 2266300 8650900 6179400 4665200 997470 3262600 16054000 3646 1824 3278 31530;31531;31532;31533;31534;31535;31536;31537;31538;31539;31540;31541 24824;24825;24826;24827;24828;24829;24830;24831 24824 8 ANIQAVSLK Unmodified 942.54983 0.54983053 348 O43633 CHMP2A Charged multivesicular body protein 2a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.373 42.55 2 0.0034752 48034 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 103.83 16.967 538580000 0 0 0 39907000 35628000 47482000 47624000 38376000 31522000 45675000 66634000 58233000 12949000 34886000 79663000 3647 348 3279 31542;31543;31544;31545;31546;31547;31548;31549;31550;31551;31552;31553 24832;24833;24834;24835;24836;24837;24838;24839;24840;24841;24842;24843 24843 12 ANISVHPDK Unmodified 979.50869 0.50869399 5244 Q9Y5Q8 GTF3C5 General transcription factor 3C polypeptide 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16.151 15.561 2 0.01435 14065 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 58.426 33.607 135810000 10644000 41662000 4990000 3335400 3368600 3618600 3730500 3346600 2350300 5464400 8844100 8906300 10459000 9577100 15509000 3648 5244 3280 31554;31555;31556;31557;31558;31559;31560;31561;31562;31563;31564;31565;31566;31567;31568 24844;24845;24846;24847;24848;24849 24848 6 ANITAIRR Unmodified 913.54575 0.5457482 1570 P49368 CCT3 T-complex protein 1 subunit gamma yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.371 20.572 2 0.0086507 21255 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 150.35 69.03 1874400000 0 0 0 124780000 81464000 80904000 118990000 123730000 69502000 140510000 280980000 332810000 110960000 164470000 245290000 3649 1570 3281 31569;31570;31571;31572;31573;31574;31575;31576;31577;31578;31579;31580 24850;24851;24852;24853 24850 1 ANITFEYMFEEVPIVIK Unmodified 2042.0435 0.043451304 279 O15372 EIF3H Eukaryotic translation initiation factor 3 subunit H yes yes 0 0 0 By MS/MS 2 0 1 1 100.69 92.557 2 5.2684E-09 119184 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 128.54 106.49 29337000 29337000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3650 279 3282 31581 24854 24854 1 ANITFEYMFEEVPIVIK Oxidation (M) 2058.0384 0.038365926 279 O15372 EIF3H Eukaryotic translation initiation factor 3 subunit H yes yes 0 1 0 By MS/MS 2 0 1 1 97.671 89.54 2 0.023273 115598 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 44.89 30.204 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3651 279 3282 31582 24855 24855 1 ANIVDQSHLHDSSQK Unmodified 1677.8071 0.80706086 4024 Q99570 PIK3R4 Phosphoinositide 3-kinase regulatory subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 24.04 23.426 3 0.0001846 31366 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.652 64.663 177820000 0 41546000 34352000 5313500 5825700 8871600 7156600 5222600 4423200 7449900 6219200 16095000 8343500 10722000 16283000 3652 4024 3283 31583;31584;31585;31586;31587;31588;31589;31590;31591;31592;31593;31594;31595;31596;31597 24856;24857;24858;24859;24860;24861;24862;24863;24864;24865;24866 24859 10 ANIVHLMLSSPEQIQK Oxidation (M) 1822.9611 0.96111866 1754 P55060 CSE1L Exportin-2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 70.736 69.727 3 2.2197E-08 91364 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 106.19 90.009 401870000 207350000 0 18023000 5684800 0 47582000 0 8604900 9334800 0 21784000 27045000 0 17846000 38618000 3653 1754 3284 31598;31599;31600;31601;31602;31603;31604;31605;31606;31607 24867;24868;24869;24870;24871;24872;24873;24874;24875;24876 24870 2858 9 ANIVHLMLSSPEQIQK Unmodified 1806.9662 0.96620404 1754 P55060 CSE1L Exportin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.09 3.85 4 7 2 1 1 1 1 1 1 1 1 1 80.889 78.838 2;3 4.0391E-58 101421 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 198.14 153.59 664000000 395240000 47259000 3239700 0 0 28890000 0 15958000 22522000 23648000 0 22113000 18312000 0 86821000 3654 1754 3284 31608;31609;31610;31611;31612;31613;31614;31615;31616;31617;31618 24877;24878;24879;24880;24881;24882;24883;24884;24885;24886;24887;24888;24889 24884 13 ANLACSPLGGGEPSPGAGEPSK Unmodified 2051.9582 0.95821812 4999 Q9ULL5 PRR12 Proline-rich protein 12 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 57.101 56.954 2 3.8917E-08 65046 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 57.679 52.073 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3655 4999 3285 31619;31620 24890;24891 24890 2 ANLEAFTVDK Unmodified 1106.5608 0.56078914 1328 P33176 KIF5B Kinesin-1 heavy chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 60.763 59.224 2 0.0017238 65428 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 89.08 53.724 1500400000 28320000 763620000 11910000 50342000 54846000 58788000 55256000 45977000 41743000 71710000 76268000 71994000 44468000 50969000 74221000 3656 1328 3286 31621;31622;31623;31624;31625;31626;31627;31628;31629;31630;31631;31632;31633;31634;31635;31636;31637 24892;24893;24894;24895;24896;24897;24898;24899;24900;24901;24902;24903;24904;24905;24906;24907;24908;24909;24910 24893 19 ANLEGANLK Unmodified 928.49779 0.49779495 3045 Q7L273 KCTD9 BTB/POZ domain-containing protein KCTD9 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 30.84 26.423 2 0.0062783 34243 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.25 30.834 37258000 0 37258000 0 0 0 0 0 0 0 0 0 0 0 0 0 3657 3045 3287 31638;31639 24911;24912 24912 2 ANLENPIRLA Unmodified 1109.6193 0.61930707 144 O00330 PDHX Pyruvate dehydrogenase protein X component, mitochondrial yes yes 0 0 1 By MS/MS 2 0 1 1 75.392 70.452 2 0.044001 88210 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.787 50.224 53939000 0 53939000 0 0 0 0 0 0 0 0 0 0 0 0 0 3658 144 3288 31640 24913 24913 1 ANLERTFIAIK Acetyl (Protein N-term) 1316.7452 0.74523587 1138 P22392 NME2 Nucleoside diphosphate kinase B yes yes 1 0 1 By MS/MS By MS/MS By MS/MS 2.33 0.471 2 1 1 1 1 87.475 82.883 2 0.014838 101616 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 55.549 25.295 13218000 8700200 1866900 2651100 0 0 0 0 0 0 0 0 0 0 0 0 3659 1138 3289 31641;31642;31643 24914;24915;24916;24917 24917 4 ANLERTFIAIKPDGVQR Acetyl (Protein N-term) 1969.0745 0.074508932 1138 P22392 NME2 Nucleoside diphosphate kinase B yes yes 1 0 2 By MS/MS 10 0 1 1 81.182 81.361 3 0.0013084 93725 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 46.663 42.225 5053800 0 0 0 0 0 0 0 0 5053800 0 0 0 0 0 0 3660 1138 3290 31644 24918 24918 1 ANLGVFSVFAPR Unmodified 1276.6928 0.69280637 28 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 90.594 90.684 2 0.0027243 105099 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.556 67.727 3125500 0 0 0 0 0 1051100 0 0 0 0 0 0 0 0 2074400 3661 28 3291 31645;31646 24919;24920 24919 2 ANLISEDIESAISDSK Unmodified 1690.8261 0.82612454 2209 Q12929 EPS8 Epidermal growth factor receptor kinase substrate 8 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 89.822 85.768 2 0.0073768 106800 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 53.754 37.5 12873000 0 12873000 0 0 0 0 0 0 0 0 0 0 0 0 0 3662 2209 3292 31647;31648 24921;24922 24921 2 ANLLNNEAHAITMQVTK Oxidation (M) 1882.9571 0.95709591 1496 P46063 RECQL ATP-dependent DNA helicase Q1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 5 3.74 7 2 5 4 2 3 1 1 1 1 1 73.163 69.889 3 2.4957E-05 86855 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 88.385 72.993 838240000 599940000 109710000 95926000 1708200 2118700 0 2856100 0 0 0 0 10309000 0 0 15668000 3663 1496 3293 31649;31650;31651;31652;31653;31654;31655;31656;31657;31658;31659;31660;31661;31662 24923;24924;24925;24926;24927;24928;24929;24930 24929 2359 7 ANLLNNEAHAITMQVTK Unmodified 1866.9622 0.96218129 1496 P46063 RECQL ATP-dependent DNA helicase Q1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.43 3.54 4 1 2 1 2 2 1 1 77.498 74.475 2;3 2.9493E-26 91412 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 121.27 110.67 1336200000 939600000 303680000 46598000 0 0 0 0 0 0 0 0 0 0 7464100 38823000 3664 1496 3293 31663;31664;31665;31666;31667;31668;31669 24931;24932;24933;24934;24935;24936;24937;24938;24939 24936 9 ANLNLENLLEATK Unmodified 1441.7777 0.77765821 4621 Q9NS87 KIF15 Kinesin-like protein KIF15 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 92.945 88.887 2 4.3345E-13 110614 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 150.04 135.1 48073000 0 48073000 0 0 0 0 0 0 0 0 0 0 0 0 0 3665 4621 3294 31670;31671 24940 24940 1 ANLPQSFQVDTSK Unmodified 1433.7151 0.71505795 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.288 58.403 2 1.9634E-18 66358 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 157.38 139.94 1011500000 0 0 0 62280000 43868000 65235000 66571000 53660000 39257000 79672000 138870000 117900000 78254000 96468000 169430000 3666 1124 3295 31672;31673;31674;31675;31676;31677;31678;31679;31680;31681;31682;31683 24941;24942;24943;24944;24945;24946;24947;24948;24949;24950;24951;24952;24953;24954;24955;24956;24957;24958;24959 24956 18 ANLQIDQINTDLNLER Unmodified 1868.9592 0.9592044 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.42 2 1 1 24 2 2 2 2 2 2 2 2 2 2 2 2 2 81.599 81.347 2;3 1.2724E-215 93340 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 281.25 266.37 2556000000 0 37773000 0 30251000 137390000 188030000 113080000 135300000 166100000 394720000 339150000 327590000 93925000 165250000 427460000 3667 1356 3296 31684;31685;31686;31687;31688;31689;31690;31691;31692;31693;31694;31695;31696;31697;31698;31699;31700;31701;31702;31703;31704;31705;31706;31707;31708;31709 24960;24961;24962;24963;24964;24965;24966;24967;24968;24969;24970;24971;24972;24973;24974;24975;24976;24977;24978;24979 24972 18 ANLQIDQINTDLNLERSHAQK Unmodified 2420.2408 0.24079899 1356 P35579 MYH9 Myosin-9 yes yes 0 0 1 By MS/MS 2 0 2 2 79.275 71.144 3;4 5.806E-18 93435 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.06 87.304 46639000 46639000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3668 1356 3297 31710;31711 24980;24981 24980 2 ANLQQAIVTPLK Unmodified 1294.7609 0.76088593 5009 Q9ULW0 TPX2 Targeting protein for Xklp2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 70.775 70.877 2 0.0013151 81635 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 68.893 56.667 23316000 0 0 0 0 1589100 4202400 1661700 0 3473300 0 3369900 0 2018500 3029000 3972300 3669 5009 3298 31712;31713;31714;31715;31716;31717;31718;31719 24982;24983;24984;24985;24986 24982 5 ANLQQAIVTPLKPVDNTYYK Unmodified 2275.2212 0.22123275 5009 Q9ULW0 TPX2 Targeting protein for Xklp2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 77.74 77.914 3 2.8222E-05 90087 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 56.304 33.204 69057000 0 0 0 0 0 0 0 10866000 5369100 0 10384000 14548000 5897800 5984900 16006000 3670 5009 3299 31720;31721;31722;31723;31724;31725;31726 24987;24988;24989;24990;24991;24992;24993 24993 7 ANLSLLR Unmodified 785.47594 0.4759373 1151 P23246 SFPQ Splicing factor, proline- and glutamine-rich yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.338 52.484 2 0.024481 59944 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 97.068 20.221 639050000 0 0 0 38064000 31267000 50217000 60392000 32509000 29382000 55330000 66354000 87318000 45903000 56366000 85952000 3671 1151 3300 31727;31728;31729;31730;31731;31732;31733;31734;31735;31736;31737;31738 24994;24995 24994 1 ANLVLLSGANEGK Unmodified 1284.7038 0.70376498 375 O43847 NRD1 Nardilysin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 64.913 64.243 2 6.1061E-21 78846 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 164.64 145.37 692290000 0 478020000 0 12170000 11007000 12213000 9315700 11150000 7135400 14554000 25922000 20369000 25587000 20314000 44543000 3672 375 3301 31739;31740;31741;31742;31743;31744;31745;31746;31747;31748;31749;31750;31751;31752 24996;24997;24998;24999;25000;25001;25002;25003;25004;25005;25006;25007;25008;25009;25010;25011;25012;25013;25014;25015;25016;25017 25006 20 ANMLQEYSK Oxidation (M) 1098.5016 0.5015597 5074 Q9UQR1 ZNF148 Zinc finger protein 148 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 23.594 23.459 2 0.0024087 24708 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 89.355 72.579 65829000 0 17921000 0 3471200 3025600 2754000 3494600 3016100 2978800 5687900 3610800 6041900 5564200 3669600 4593000 3673 5074 3302 31753;31754;31755;31756;31757;31758;31759;31760;31761;31762;31763;31764;31765 25018;25019;25020;25021 25020 6453 4 ANMLQEYSK Unmodified 1082.5066 0.50664508 5074 Q9UQR1 ZNF148 Zinc finger protein 148 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 42.08 42.231 2 0.0058618 45962 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 76.605 55.068 142660000 0 0 0 8403900 9437800 8650400 13335000 7444800 8076300 13906000 0 16366000 15262000 16887000 24886000 3674 5074 3302 31766;31767;31768;31769;31770;31771;31772;31773;31774;31775;31776 25022;25023;25024;25025;25026;25027;25028;25029;25030;25031;25032 25028 7 ANMQGLVER Acetyl (Protein N-term) 1058.5179 0.51787847 1408 P40123 CAP2 Adenylyl cyclase-associated protein 2 yes yes 1 0 0 By matching By matching By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 63.721 63.653 2 0.0052358 71971 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.729 45.66 17821000 0 0 0 1081600 1664900 0 2028600 0 0 0 0 0 2859200 0 10186000 3675 1408 3303 31777;31778;31779;31780;31781 25033 25033 1 ANNDAVLK Acetyl (Protein N-term) 885.4556 0.45559579 2205 Q12904 AIMP1 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1;Endothelial monocyte-activating polypeptide 2 yes yes 1 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 8.58 3.17 1 1 10 1 1 1 1 1 1 1 1 1 1 1 1 36.761 37.159 2 0.0050737 87709 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 84.498 57.181 156980000 30491000 0 1658600 9750800 6357800 7864600 9578800 7247500 8013500 0 15802000 17248000 12488000 0 30482000 3676 2205 3304 31782;31783;31784;31785;31786;31787;31788;31789;31790;31791;31792;31793 25034;25035;25036 25035 3 ANNGICFLR Unmodified 1063.5233 0.5232982 1528 P47897 QARS Glutamine--tRNA ligase yes yes 0 0 0 By MS/MS 10 0 1 1 60.558 60.75 2 0.036536 68468 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 65.038 48.835 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3677 1528 3305 31794 25037 25037 1 ANNHQQQQGLQDSSSK Unmodified 1768.8089 0.80885177 3566 Q8WVV4 POF1B Protein POF1B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.4743 6.598 3 5.5679E-29 4179 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 141.85 131.5 192590000 0 0 0 99207000 6513700 4905200 8958400 32240000 4431700 4876300 10342000 9148400 5596200 2809300 3563800 3678 3566 3306 31795;31796;31797;31798;31799;31800;31801;31802;31803;31804;31805;31806 25038;25039;25040;25041;25042;25043;25044;25045;25046;25047;25048;25049 25048 12 ANNIDYTVHSVRR Unmodified 1543.7855 0.78553755 1243 P29144 TPP2 Tripeptidyl-peptidase 2 yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 30.854 31.439 3 0.010462 33122 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 34.179 19.924 9684800 0 0 0 0 0 0 0 0 0 0 3061100 0 0 0 6623700 3679 1243 3307 31807;31808 25050 25050 1 ANNLSSLSK Unmodified 932.49271 0.49270958 492 O75396 SEC22B Vesicle-trafficking protein SEC22b yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 22.812 23.107 2 0.013905 23006 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 121.09 86.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3680 492 3308 31809;31810;31811;31812;31813;31814;31815;31816;31817;31818 25051;25052;25053;25054;25055;25056;25057;25058;25059;25060 25058 10 ANNNAAVAPTTCPLQPVTDPFAFSR Unmodified 2658.286 0.28603463 242 O15027 SEC16A Protein transport protein Sec16A yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 87.374 87.546 3 0.0050124 101396 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 24.068 17.509 5062400 0 0 0 0 0 0 0 0 1061700 0 0 0 0 0 4000700 3681 242 3309 31819;31820 25061 25061 1 ANNPEQNRLSECEEQAK Unmodified 2015.8967 0.8966805 3039 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.678 26.895 3 4.66E-37 28720 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 146.78 136.22 340630000 0 0 0 8710500 11501000 51651000 0 8164400 12678000 24830000 55232000 36984000 18587000 35683000 76610000 3682 3039 3310 31821;31822;31823;31824;31825;31826;31827;31828;31829;31830;31831;31832 25062;25063;25064;25065;25066;25067;25068;25069;25070;25071;25072 25064 11 ANNSPALTGNSQPQHQAAAAAAQQQQQCGGGGATK Acetyl (Protein N-term) 3459.5934 0.59340305 2815 Q5VTL8 PRPF38B Pre-mRNA-splicing factor 38B yes yes 1 0 0 By MS/MS By MS/MS By matching By matching By matching 10 0 5 1 1 1 1 1 46.935 47.363 3 1.762E-58 53076 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 84.962 82.932 29165000 0 0 0 0 0 0 6507200 0 3777900 0 5717500 6712900 0 0 6449700 3683 2815 3311 31833;31834;31835;31836;31837 25073 25073 1 ANNSQEPSPQLASSVASTR Unmodified 1942.9344 0.93444622 3865 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 2 2 1 1 2 51.078 49.98 2;3 1.7777E-58 56632 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 160.27 144.52 80672000 0 18376000 0 25769000 10643000 0 0 0 0 0 0 0 0 25884000 0 3684 3865 3312 31838;31839;31840;31841;31842;31843;31844;31845;31846 25074;25075;25076;25077;25078;25079;25080 25076 7 ANNSTYGLAAAVFTK Unmodified 1526.7729 0.77290718 796 P05091 ALDH2 Aldehyde dehydrogenase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 79.214 79.091 2 0.0019639 91783 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 49.423 34.451 7460700 0 0 0 4356100 0 0 0 3104600 0 0 0 0 0 0 0 3685 796 3313 31847;31848 25081;25082 25082 2 ANNYNEAVYLVR Unmodified 1424.7048 0.70482762 2170 Q09161 NCBP1 Nuclear cap-binding protein subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 65.008 65.017 2 1.0086E-07 73625 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 117.53 93.675 83416000 0 0 0 0 10523000 13096000 12475000 12879000 0 18365000 0 0 16079000 0 0 3686 2170 3314 31849;31850;31851;31852;31853;31854;31855;31856;31857;31858 25083;25084;25085;25086;25087;25088;25089;25090;25091;25092 25086 10 ANPAAARAPSAK Unmodified 1123.6098 0.60980502 2289 Q13428 TCOF1 Treacle protein yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 13.318 10.162 2 1.7858E-22 15392 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 191.55 170.58 87413000 82998000 0 4415400 0 0 0 0 0 0 0 0 0 0 0 0 3687 2289 3315 31859;31860 25093;25094 25093 1 ANPALYVLR Unmodified 1015.5815 0.581465 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 69.007 69.092 2 0.0057978 79561 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 76.774 53.732 102630000 0 0 0 0 12603000 0 0 16702000 0 0 0 29255000 22948000 21124000 0 3688 2930 3316 31861;31862;31863;31864;31865;31866 25095;25096;25097;25098 25098 3 ANPETDPEALFQK Unmodified 1458.6991 0.69907354 3821 Q96ES7 CCDC101 SAGA-associated factor 29 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 69.713 69.78 2 4.2251E-09 80095 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 112.75 89.429 137500000 0 0 0 8442800 13603000 11109000 9372100 9628900 0 14187000 14791000 23904000 10426000 10575000 11463000 3689 3821 3317 31867;31868;31869;31870;31871;31872;31873;31874;31875;31876;31877 25099;25100;25101;25102;25103;25104;25105;25106;25107;25108 25102 10 ANPFFVLQR Unmodified 1090.5924 0.59236404 2843 Q66K14 TBC1D9B TBC1 domain family member 9B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 80.651 80.791 2 0.021281 92619 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 52.403 38.417 73260000 0 0 0 0 0 8329200 6401300 5272200 6719800 7568500 5775800 10263000 5676500 5782200 11471000 3690 2843 3318 31878;31879;31880;31881;31882;31883;31884;31885;31886;31887 25109;25110;25111;25112;25113;25114 25112 6 ANPFGGASHAK Unmodified 1055.5148 0.514842 1884 P62266 RPS23 40S ribosomal protein S23 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 16.999 16.179 2 2.8411E-05 14799 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 119.21 92.606 2496200000 734800000 370120000 210720000 51354000 40071000 37673000 64481000 36090000 43833000 77954000 105710000 233630000 123550000 133370000 232840000 3691 1884 3319 31888;31889;31890;31891;31892;31893;31894;31895;31896;31897;31898;31899;31900;31901;31902;31903 25115;25116;25117;25118;25119;25120;25121;25122;25123;25124;25125;25126;25127;25128;25129;25130;25131;25132;25133;25134;25135;25136;25137;25138;25139 25128 21 ANPGAWILR Unmodified 996.5505 0.55049923 4751;4750 Q9NYU2;Q9NYU1 UGGT1;UGGT2 UDP-glucose:glycoprotein glucosyltransferase 1;UDP-glucose:glycoprotein glucosyltransferase 2 no no 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 71.726 71.743 2 0.045277 82984 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 43.246 31.341 38407000 0 0 0 2620700 3010300 3538100 3621500 2642400 2501800 6032600 0 5135900 4810700 4493000 0 3692 4751;4750 3320 31904;31905;31906;31907;31908;31909;31910;31911;31912;31913 25140 25140 1 ANPHPFACSVEDPTK Unmodified 1668.7566 0.75660519 3557 Q8WV41 SNX33 Sorting nexin-33 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 47.845 41.969 3 1.258E-23 58165 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 125.36 113.74 35205000 19452000 0 15754000 0 0 0 0 0 0 0 0 0 0 0 0 3693 3557 3321 31914;31915 25141;25142 25141 2 ANPPITHLGDEPK Unmodified 1387.7096 0.70957864 659 O95425 SVIL Supervillin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 39.945 39.992 3 0.033532 44395 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 30.483 18.715 41316000 0 0 0 0 8522400 5710300 7735600 0 0 7482500 11866000 0 0 0 0 3694 659 3322 31916;31917;31918;31919;31920 25143 25143 1 ANPQVGVAFPHIK Unmodified 1376.7565 0.75646926 974 P13010 XRCC5 X-ray repair cross-complementing protein 5 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 66.033 66.175 3 0.0084929 76286 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 41.48 28.343 23529000 0 0 0 0 0 0 8606500 0 0 0 0 0 14922000 0 0 3695 974 3323 31921;31922 25144;25145 25145 2 ANPTQLNTVEFLWDPAK Unmodified 1942.9789 0.97887721 2192 Q12800 TFCP2 Alpha-globin transcription factor CP2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 90.897 91.05 2 0.00050593 105496 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.802 51.956 7386600 0 0 0 0 0 0 0 0 0 1746600 1892800 0 0 0 3747200 3696 2192 3324 31923;31924;31925 25146;25147 25147 2 ANPTVTLFPPSSEELQANK Unmodified 2042.032 0.032034995 43 B9A064;P0CG04 IGLL5;IGLC1 Immunoglobulin lambda-like polypeptide 5;Ig lambda-1 chain C regions yes no 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 7 2 2 2 1 80.081 80.05 2;3 0.0052611 92712 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 25.186 16.826 30766000 0 0 0 5882600 0 0 0 10122000 0 13617000 0 0 1144800 0 0 3697 43 3325 31926;31927;31928;31929;31930;31931;31932 25148;25149;25150 25149 3 ANPVNCVFFDEANK Unmodified 1623.7351 0.73514147 3799 Q96DM3 C18orf8 Uncharacterized protein C18orf8 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 78.22 74.142 2 0.0010053 92502 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.37 102.27 77891000 0 77891000 0 0 0 0 0 0 0 0 0 0 0 0 0 3698 3799 3326 31933;31934 25151 25151 1 ANQDSGPGLSLEEFIAFEHPEEVDYMTEFVIQEALEEHDK Unmodified 4592.0853 0.085335297 2400 Q14257 RCN2 Reticulocalbin-2 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 102.32 96.842 4 9.501E-45 121617 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.077 75.048 161670000 147730000 13939000 0 0 0 0 0 0 0 0 0 0 0 0 0 3699 2400 3327 31935;31936;31937 25152;25153;25154 25154 3 ANQELGLALDSWDLDFYTK Unmodified 2198.0532 0.053164368 248 O15067 PFAS Phosphoribosylformylglycinamidine synthase yes yes 0 0 0 By MS/MS 2 0 1 1 98.62 90.489 2 2.2103E-05 116735 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 106.3 85.567 23914000 23914000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3700 248 3328 31938 25155 25155 1 ANQEQYAEGK Unmodified 1136.5098 0.5098162 4860 Q9UBU8 MORF4L1 Mortality factor 4-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 8.9844 9.0331 2 0.0021904 7757 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 85.731 71.728 23164000 0 0 0 2395900 2767000 3280400 3608100 2820200 2449200 1664900 0 0 4177900 0 0 3701 4860 3329 31939;31940;31941;31942;31943;31944;31945;31946;31947;31948 25156;25157;25158;25159;25160;25161;25162;25163 25157 7 ANQISPSNSSLK Unmodified 1244.6361 0.63607935 3155 Q86UU0 BCL9L B-cell CLL/lymphoma 9-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 26.741 26.483 2 0.00053296 27889 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 78.136 48.327 143400000 0 15336000 0 14556000 0 0 0 14780000 12252000 15938000 13874000 27952000 15779000 12936000 0 3702 3155 3330 31949;31950;31951;31952;31953;31954;31955;31956;31957 25164;25165;25166;25167;25168;25169 25168 6 ANQLAEEIESSAQYK Unmodified 1679.8002 0.80024414 4047 Q99700 ATXN2 Ataxin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 2 1 2 71.753 71.776 2;3 7.3686E-06 82485 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 81.92 72.265 43104000 0 0 0 2787800 4125900 4995000 6291800 4650700 4481200 3857700 0 0 3076700 4648400 4189000 3703 4047 3331 31958;31959;31960;31961;31962;31963;31964;31965;31966;31967;31968;31969;31970 25170;25171;25172;25173;25174;25175;25176;25177;25178;25179;25180;25181 25178 12 ANQVNGNAVQLK Acetyl (Protein N-term) 1296.6786 0.67861287 322 O43390 HNRNPR Heterogeneous nuclear ribonucleoprotein R yes yes 1 0 0 By MS/MS 1 0 1 1 101.67 102.56 2 0.0017428 93650 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 67.993 51.216 1320900 0 1320900 0 0 0 0 0 0 0 0 0 0 0 0 0 3704 322 3332 31971 25182 25182 1 ANRDLIYK Unmodified 991.54508 0.5450795 1340 P35221 CTNNA1 Catenin alpha-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 28.696 24.322 2 0.041366 34512 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 111.82 39.677 306630000 253870000 34749000 18015000 0 0 0 0 0 0 0 0 0 0 0 0 3705 1340 3333 31972;31973;31974 25183 25183 0 ANRFEYLLK Unmodified 1152.6291 0.62914348 389 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 59.872 60.135 3 0.0034398 67659 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.928 48.153 51720000 0 0 0 0 0 0 2420000 4285800 4807600 7345600 0 6090100 6277300 5413400 15081000 3706 389 3334 31975;31976;31977;31978;31979;31980;31981;31982 25184;25185;25186 25185 3 ANRGPAYGLSR Acetyl (Protein N-term) 1202.6156 0.61561868 1391 P37802 TAGLN2 Transgelin-2 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.685 37.866 2 8.3756E-06 40667 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 140.07 88.221 2463700000 0 0 0 91227000 84471000 128980000 197170000 117890000 106590000 166140000 322380000 314390000 132680000 189980000 611800000 3707 1391 3335 31983;31984;31985;31986;31987;31988;31989;31990;31991;31992;31993;31994 25187;25188;25189;25190;25191;25192;25193;25194;25195;25196;25197;25198;25199;25200 25190 14 ANRGPAYGLSREVQQK Acetyl (Protein N-term) 1814.9387 0.93874373 1391 P37802 TAGLN2 Transgelin-2 yes yes 1 0 2 By MS/MS 2 0 1 1 54.439 46.331 3 0.0022629 64012 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 44.925 19.99 223020000 223020000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3708 1391 3336 31995 25201;25202 25202 2 ANSEEFIPIFANNPR Unmodified 1717.8424 0.84238373 4360 Q9H270 VPS11 Vacuolar protein sorting-associated protein 11 homolog yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 84.57 84.677 2 1.1353E-09 97796 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 92.866 81.547 38067000 0 0 0 0 0 3647000 0 0 0 7841900 0 5506200 2892100 5781500 12398000 3709 4360 3337 31996;31997;31998;31999;32000;32001 25203;25204;25205;25206 25204 4 ANSEHNGPMDGQSGTETK Oxidation (M) 1874.7701 0.770083 686 O95757 HSPA4L Heat shock 70 kDa protein 4L yes yes 0 1 0 By MS/MS 2.5 0.5 2 2 4 6.6157 3.315 2;3 5.5136E-74 5309 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 178.52 177.74 132660000 0 132660000 0 0 0 0 0 0 0 0 0 0 0 0 0 3710 686 3338 32002;32003;32004;32005 25207;25208;25209 25207 827 3 ANSEHNGPMDGQSGTETK Unmodified 1858.7752 0.77516838 686 O95757 HSPA4L Heat shock 70 kDa protein 4L yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.55 2 2 8 4 1 1 1 1 1 1 1 1 10.419 9.4237 3 1.116E-19 12140 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.865 71.097 281160000 0 249020000 0 0 0 2776600 1527300 1273100 903530 2270900 8118000 4975900 0 0 10287000 3711 686 3338 32006;32007;32008;32009;32010;32011;32012;32013;32014;32015;32016;32017 25210;25211;25212;25213;25214;25215 25211 6 ANSGGVDLDSSGEFASIEK Unmodified 1881.8592 0.85921559 3657 Q92766 RREB1 Ras-responsive element-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.21 71.284 2 5.8944E-24 81874 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 124.45 113.84 116530000 0 0 0 6805900 8492400 6934200 7953700 7874000 7506200 10643000 13605000 14251000 7816000 10226000 14418000 3712 3657 3339 32018;32019;32020;32021;32022;32023;32024;32025;32026;32027;32028;32029 25216;25217;25218;25219;25220;25221;25222;25223;25224;25225;25226;25227 25225 12 ANSHFLVSAGSDRK Unmodified 1487.7481 0.74808942 3538 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 yes yes 0 0 1 By MS/MS 2 0 1 1 35.588 29.241 3 0.0035846 40924 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.36 47.528 31896000 31896000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3713 3538 3340 32030 25228 25228 0 ANSIGSTSASSVPNTDDEDSDYHQEAYK Unmodified 2987.2541 0.25406161 4891 Q9UH92 MLX Max-like protein X yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 46.062 46.215 3 6.2915E-36 51050 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.933 82.557 76796000 0 0 0 4045900 4708900 7049400 6375100 11724000 0 8733300 7924600 10296000 0 5849700 10089000 3714 4891 3341 32031;32032;32033;32034;32035;32036;32037;32038;32039;32040 25229;25230;25231;25232;25233;25234;25235;25236 25232 8 ANSNLVLQADR Unmodified 1199.6258 0.62584901 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.928 41.106 2 7.9777E-28 45721 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 201.84 144.8 671190000 0 0 0 32491000 29820000 49304000 44466000 45001000 33011000 64304000 71541000 79816000 75201000 62040000 84200000 3715 528 3342 32041;32042;32043;32044;32045;32046;32047;32048;32049;32050;32051;32052 25237;25238;25239;25240;25241;25242;25243;25244;25245;25246;25247;25248;25249 25245 13 ANSNPFEVK Unmodified 1004.4927 0.49270958 1970 P78316 NOP14 Nucleolar protein 14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.09 40.27 2 0.0095026 44972 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 66.546 46.55 159470000 0 0 0 10867000 15552000 15725000 9808600 7459200 6545900 16155000 16668000 22209000 13379000 11732000 13374000 3716 1970 3343 32053;32054;32055;32056;32057;32058;32059;32060;32061;32062;32063;32064 25250;25251;25252;25253 25252 4 ANSSATETINK Unmodified 1134.5517 0.55168102 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 10.606 10.747 2 4.3531E-05 9444 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 116.3 106.72 276180000 0 0 0 58900000 10777000 12002000 18261000 47469000 10220000 14242000 19632000 32003000 25264000 12536000 14875000 3717 1029 3344 32065;32066;32067;32068;32069;32070;32071;32072;32073;32074;32075;32076;32077 25254;25255;25256;25257;25258;25259;25260;25261;25262;25263;25264;25265;25266 25261 13 ANSTSDSVFTETPSPVLK Unmodified 1878.9211 0.92108756 4966 Q9UKI2 CDC42EP3 Cdc42 effector protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.599 73.666 2 2.4086E-39 84768 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 171.29 156.41 146170000 0 0 0 7240000 9364500 7129100 14670000 8488700 8822200 13609000 14228000 18144000 12769000 13432000 18272000 3718 4966 3345 32078;32079;32080;32081;32082;32083;32084;32085;32086;32087;32088;32089 25267;25268;25269;25270;25271;25272;25273;25274;25275;25276;25277;25278 25269 12 ANSTTTAGRQLK Unmodified 1246.663 0.6629628 2493 Q15059 BRD3 Bromodomain-containing protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 10.67 7.5425 3 0.0012433 11707 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.554 53.69 85576000 78496000 3439200 3641500 0 0 0 0 0 0 0 0 0 0 0 0 3719 2493 3346 32090;32091;32092 25279 25279 1 ANSWQLVETPEK Unmodified 1400.6936 0.69359423 5100 Q9Y2H0 DLGAP4 Disks large-associated protein 4 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 68.256 62.963 2 0.0057803 80468 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.958 63.177 45896000 0 45896000 0 0 0 0 0 0 0 0 0 0 0 0 0 3720 5100 3347 32093;32094 25280 25280 1 ANTFVAELK Unmodified 991.53385 0.53384611 1423 P40926 MDH2 Malate dehydrogenase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 55.185 55.382 2 0.0035825 61444 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 109.11 75.559 83834000 0 0 0 16254000 0 2524800 4595300 6130100 0 0 9440200 10391000 2417300 6258400 25823000 3721 1423 3348 32095;32096;32097;32098;32099;32100;32101;32102;32103 25281;25282;25283;25284;25285 25282 4 ANTLIAFTK Unmodified 977.55458 0.55458155 387 O60244 MED14 Mediator of RNA polymerase II transcription subunit 14 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 62.505 62.674 2 0.011172 71711 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 63.216 38.293 57792000 0 0 0 0 3699500 6158700 6816400 5687000 3520100 4712700 5223400 5772600 5931600 4784900 5485500 3722 387 3349 32104;32105;32106;32107;32108;32109;32110;32111;32112;32113;32114 25286;25287;25288;25289;25290;25291;25292;25293;25294 25286 9 ANTLVREANFLAEEMSK Unmodified 1921.9568 0.95676156 4350 Q9H1H9 KIF13A Kinesin-like protein KIF13A yes yes 0 0 1 By MS/MS 2 0 1 1 92.598 84.468 3 0.00022006 109528 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.635 54.999 16617000 16617000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3723 4350 3350 32115 25295 25295 1 ANTSGDFEK Unmodified 967.42469 0.42468959 1601;32 P49792;P0DJD0;P0DJD1;A6NKT7;Q7Z3J3 RANBP2;RGPD1;RGPD2;RGPD3;RGPD4 E3 SUMO-protein ligase RanBP2;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RanBP2-like and GRIP domain-containing protein 3;RanBP2-like and GRIP domain-containing protein 4 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 10.864 10.888 2 0.021188 9861 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 52.482 25.52 13677000 0 0 0 1301000 962080 3023900 2726700 1823800 1751400 2087600 0 0 0 0 0 3724 1601;32 3351 32116;32117;32118;32119;32120;32121;32122;32123 25296;25297;25298;25299;25300 25296 5 ANTTAFLTPLEIK Unmodified 1417.7817 0.78168095 5236 Q9Y5K6 CD2AP CD2-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85.232 84.765 2 0.0010235 98111 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.262 56.607 264730000 0 192470000 2659400 2805900 4094000 4541600 5630000 4431100 4756000 6674200 6522800 9094200 3886500 5480500 11683000 3725 5236 3352 32124;32125;32126;32127;32128;32129;32130;32131;32132;32133;32134;32135;32136;32137 25301;25302;25303;25304;25305;25306;25307;25308;25309;25310;25311;25312;25313;25314 25301 14 ANVADTK Acetyl (Protein N-term) 759.37628 0.37628284 440 O60884 DNAJA2 DnaJ homolog subfamily A member 2 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 16.241 16.412 1;2 0.0087493 15638 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 63.565 41.434 67662000 509240 460710 360910 0 2991100 4578800 4956000 4407400 4706000 6652100 7829000 8680400 0 7232400 14298000 3726 440 3353 32138;32139;32140;32141;32142;32143;32144;32145;32146;32147;32148;32149;32150 25315;25316;25317;25318 25318 4 ANVAVVSGAPLQGQLVAR Unmodified 1748.9897 0.98971667 168 O00560 SDCBP Syntenin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.57 75.606 2 8.4125E-39 87293 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 137.16 128.43 68919000 0 0 0 3833900 3396200 8887800 6107800 3657800 4758200 7285500 10807000 9116100 4898300 6171000 0 3727 168 3354 32151;32152;32153;32154;32155;32156;32157;32158;32159;32160;32161;32162 25319;25320;25321;25322;25323;25324;25325;25326;25327;25328;25329;25330 25328 12 ANVDISAPK Unmodified 913.4869 0.48689592 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 32.246 31.742 2 0.0030483 34948 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 91.318 70.018 705290000 0 43648000 0 44021000 35165000 41654000 60031000 53348000 34194000 50019000 60265000 84649000 73490000 48746000 76059000 3728 2172 3355 32163;32164;32165;32166;32167;32168;32169;32170;32171;32172;32173;32174;32175;32176 25331;25332;25333;25334;25335;25336;25337;25338;25339;25340;25341;25342;25343;25344;25345;25346;25347;25348;25349;25350;25351;25352;25353 25344 22 ANVDLLPR Unmodified 896.50797 0.50796571 2285 Q13421 MSLN Mesothelin;Megakaryocyte-potentiating factor;Mesothelin, cleaved form yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 53.724 54.065 2 0.02755 61396 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 57.281 33.326 142340000 0 0 0 0 0 13044000 0 16364000 0 20790000 25285000 26405000 23602000 0 16845000 3729 2285 3356 32177;32178;32179;32180;32181;32182;32183 25354;25355;25356;25357;25358 25354 4 ANVEAIMLAVMK Unmodified 1288.6883 0.68831462 344 O43592 XPOT Exportin-T yes yes 0 0 0 By MS/MS 10 0 1 1 93.582 93.723 2 0.0010167 108655 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.349 56.411 2269700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2269700 3730 344 3357 32184 25359 25359 1 ANVEAIMLAVMK Oxidation (M) 1304.6832 0.68322924 344 O43592 XPOT Exportin-T yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 86.616 81.334 2 0.0011552 104058 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.913 71.58 9876800 7287900 0 2588900 0 0 0 0 0 0 0 0 0 0 0 0 3731 344 3357 32185;32186 25360;25361 25360 426 2 ANVGLNLK Unmodified 827.4865 0.48650199 3295 Q8IZH2 XRN1 5'-3' exoribonuclease 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 41.774 41.801 2 0.0090204 45602 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 84.244 28.342 103370000 0 0 0 13662000 0 0 21752000 15123000 0 30333000 0 0 0 22504000 0 3732 3295 3358 32187;32188;32189;32190;32191 25362;25363;25364;25365;25366 25365 5 ANVPWAEVCEK Acetyl (Protein N-term) 1343.618 0.61798644 3813 Q96EK5 KIAA1279 KIF1-binding protein yes yes 1 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 80.491 80.509 2 0.0028072 93252 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 51.268 45.486 15535000 0 0 0 1095100 0 0 0 0 0 3066400 0 4787500 0 0 6586400 3733 3813 3359 32192;32193;32194;32195 25367;25368 25368 2 ANVVALVAVAEHSGEFEK Unmodified 1868.9632 0.96322715 2643 Q17R31 TATDN3 Putative deoxyribonuclease TATDN3 yes yes 0 0 0 By MS/MS 2 0 1 1 92.029 83.899 3 0.00017312 108757 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.203 50.941 19074000 19074000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3734 2643 3360 32196 25369 25369 1 ANWEAQQR Unmodified 1001.4679 0.46789181 2596 Q16181 SEPT7 Septin-7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 16.889 17.211 2 0.010545 16567 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 79.307 57.76 63187000 0 0 0 0 0 0 0 3146700 4723500 6171700 16016000 12071000 6684800 6205600 8167700 3735 2596 3361 32197;32198;32199;32200;32201;32202;32203;32204 25370;25371 25371 2 ANYAVDAYFR Unmodified 1188.5564 0.55637247 389 O60264;P28370 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 67.188 67.418 2 0.011338 76598 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.416 48.758 43616000 0 0 0 0 0 5017200 0 3926600 0 6202600 5583700 7509600 4548500 3099500 7728500 3736 389 3362 32205;32206;32207;32208;32209;32210;32211;32212 25372;25373;25374;25375;25376;25377;25378 25374 7 ANYQADLANITCEIAIK Unmodified 1906.9459 0.94586252 3101 Q7Z4S6 KIF21A Kinesin-like protein KIF21A yes yes 0 0 0 By MS/MS 2 0 1 1 91.844 86.933 3 1.8688E-07 108026 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.505 67.166 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3737 3101 3363 32213 25379 25379 1 APAAHPEGQLK Unmodified 1117.588 0.58800695 2082 Q02818 NUCB1 Nucleobindin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.18 3.74 3 1 7 1 2 1 1 1 1 1 1 1 1 13.718 12.92 2 4.9617E-11 16025 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 153.05 92.135 128930000 0 83640000 15833000 0 2085900 0 2677500 0 2199900 0 3607600 5901800 7112700 5872400 0 3738 2082 3364 32214;32215;32216;32217;32218;32219;32220;32221;32222;32223;32224 25380;25381;25382;25383;25384;25385;25386;25387;25388;25389 25383 9 APAAPADRK Unmodified 895.48756 0.48756462 3167 Q86VM9 ZC3H18 Zinc finger CCCH domain-containing protein 18 yes yes 0 0 1 By MS/MS By MS/MS By matching 2 0 3 1 1 1 6.4226 3.4584 2 0.026557 5353 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.492 67.154 49085000 12888000 19948000 16249000 0 0 0 0 0 0 0 0 0 0 0 0 3739 3167 3365 32225;32226;32227 25390 25390 1 APAAPLQAIFK Unmodified 1125.6546 0.65462995 3657 Q92766 RREB1 Ras-responsive element-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.808 81.871 2 0.00026948 94247 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.069 81.158 241900000 0 0 0 12536000 12473000 19689000 18988000 19767000 18638000 22786000 22933000 29527000 13854000 19644000 31061000 3740 3657 3366 32228;32229;32230;32231;32232;32233;32234;32235;32236;32237;32238;32239 25391;25392;25393;25394;25395;25396;25397;25398;25399;25400;25401;25402 25394 12 APAATSILHK Unmodified 1007.5764 0.57637963 3728 Q969V6 MKL1 MKL/myocardin-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.36 2.01 1 10 1 1 1 1 1 1 1 1 1 1 1 33.192 32.936 2 0.002556 34498 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.426 34.577 48009000 0 3048000 0 0 3516100 0 4155900 0 0 6057800 4637900 7951800 7347900 4634200 6659000 3741 3728 3367 32240;32241;32242;32243;32244;32245;32246;32247;32248;32249;32250 25403;25404;25405;25406;25407;25408;25409;25410;25411;25412;25413 25406 11 APAEEEVGPRK Unmodified 1181.6041 0.60405094 4801 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 2 2 2 2 2 2 1 2 2 2 2 13.147 13.3 2;3 0.0015899 12320 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 60.255 50.203 160020000 0 0 0 1433400 11473000 11334000 15592000 10533000 10852000 19769000 3321900 19102000 17888000 15232000 23488000 3742 4801 3368 32251;32252;32253;32254;32255;32256;32257;32258;32259;32260;32261;32262;32263;32264;32265;32266;32267;32268;32269;32270;32271;32272 25414;25415;25416;25417;25418;25419;25420;25421;25422 25420 6 APAEILNGK Unmodified 911.50763 0.50763136 953 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 33.48 32.362 2 2.4906E-05 35668 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 151.29 122.19 1457600000 24179000 1066300000 14326000 0 15547000 25970000 28951000 25947000 22179000 31949000 41845000 43838000 25060000 23634000 67837000 3743 953 3369 32273;32274;32275;32276;32277;32278;32279;32280;32281;32282;32283;32284;32285;32286;32287 25423;25424;25425;25426;25427;25428;25429;25430;25431;25432;25433;25434;25435 25425 9 APAEVQITAEQLLR Unmodified 1537.8464 0.84640648 4268 Q9BZJ0 CRNKL1 Crooked neck-like protein 1 yes yes 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 82.321 82.36 2 0.026047 95381 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 33.409 24.22 5240500 0 0 0 0 1246500 0 1054600 0 0 0 2939300 0 0 0 0 3744 4268 3370 32288;32289;32290 25436 25436 1 APAFAFVR Unmodified 877.48102 0.48102268 3494 Q8TCY9 URGCP Up-regulator of cell proliferation yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 67.444 67.648 2 0.011189 77534 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 77.496 61.859 19206000 0 0 0 0 0 0 3007200 0 0 4040400 0 4811700 4308200 3038500 0 3745 3494 3371 32291;32292;32293;32294;32295 25437 25437 1 APAGPSLEETSVSSPK Unmodified 1555.773 0.77296676 2864 Q6AI08 HEATR6 HEAT repeat-containing protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 47.12 46.733 2 2.4594E-27 52380 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 128.67 112.42 61410000 0 18326000 0 2673800 3180300 6076000 3665000 2668700 3626700 0 4735300 5447300 0 4989700 6021200 3746 2864 3372 32296;32297;32298;32299;32300;32301;32302;32303;32304;32305;32306 25438;25439;25440;25441;25442;25443;25444;25445;25446;25447;25448 25446 11 APAGQLPR Unmodified 808.45554 0.45553621 1183 P25205 MCM3 DNA replication licensing factor MCM3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.76 2.85 3 1 21 1 2 1 2 2 1 1 1 2 2 2 2 2 2 2 21.654 21.201 2 0.0070463 22273 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 90.986 37.276 958610000 53920000 306820000 4826900 28551000 23291000 43265000 31106000 27888000 32184000 46181000 75363000 80621000 52073000 56801000 95725000 3747 1183 3373 32307;32308;32309;32310;32311;32312;32313;32314;32315;32316;32317;32318;32319;32320;32321;32322;32323;32324;32325;32326;32327;32328;32329;32330;32331 25449;25450;25451;25452;25453;25454;25455;25456;25457;25458;25459;25460;25461;25462 25451 7 APAGQLPRSVDVILDDDLVDK Unmodified 2235.1747 0.17467649 1183 P25205 MCM3 DNA replication licensing factor MCM3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 2 1 1 90.87 86.111 3 7.847E-59 108750 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 135.21 122.5 321260000 258600000 41258000 21393000 0 0 0 0 0 0 0 0 0 0 0 0 3748 1183 3374 32332;32333;32334;32335 25463;25464;25465;25466;25467;25468;25469 25467 7 APAHHPAAISTAK Unmodified 1270.6782 0.67821894 2739 Q5JTH9 RRP12 RRP12-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9.2987 8.9574 3 0.0014507 15103 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.314 51.947 307500000 225420000 0 6815300 5301700 5298400 2789700 3193900 1841700 2018900 5257000 18058000 12896000 6558400 5051800 7001300 3749 2739 3375 32336;32337;32338;32339;32340;32341;32342;32343;32344;32345;32346;32347;32348;32349 25470;25471;25472;25473;25474;25475;25476;25477;25478 25472 6 APAHLSLPDPQALK Unmodified 1456.8038 0.80381338 1239 P28799 GRN Granulins;Acrogranin;Paragranulin;Granulin-1;Granulin-2;Granulin-3;Granulin-4;Granulin-5;Granulin-6;Granulin-7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 72.131 71.103 3 0.00038552 91643 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.548 62.261 257440000 153700000 64312000 0 1870200 1683400 2667300 2335000 0 2005500 3147700 4678100 6838400 0 4929800 9276200 3750 1239 3376 32350;32351;32352;32353;32354;32355;32356;32357;32358;32359;32360;32361 25479;25480;25481;25482;25483;25484 25479 6 APAMFNIR Oxidation (M) 934.46947 0.46947171 1842 P61247 RPS3A 40S ribosomal protein S3a yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 43.729 43.856 2 0.0079999 49061 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 75.311 59.264 162460000 0 0 0 0 0 48761000 0 36878000 0 76824000 0 0 0 0 0 3751 1842 3377 32362;32363;32364;32365 25485;25486;25487;25488;25489 25489 2989 5 APAMFNIR Unmodified 918.47456 0.47455709 1842 P61247 RPS3A 40S ribosomal protein S3a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.544 61.644 2 0.0054604 70092 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 106.76 90.056 762760000 0 0 0 38281000 38376000 54732000 39036000 53671000 31402000 68789000 71543000 108420000 51891000 74201000 132420000 3752 1842 3377 32366;32367;32368;32369;32370;32371;32372;32373;32374;32375;32376;32377 25490;25491;25492;25493;25494;25495;25496;25497;25498;25499;25500;25501 25491 12 APAMQPAEIQFAQR Unmodified 1556.7769 0.7769467 2432 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B yes yes 0 0 0 By MS/MS By matching By MS/MS By matching 10 0 4 1 1 1 1 67.336 67.339 2 0.0073494 77244 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 42.743 36.14 8163000 0 0 0 0 1541400 0 1736800 2705000 0 0 0 0 0 2179800 0 3753 2432 3378 32378;32379;32380;32381 25502 25502 1 APAPEAEDEEVAR Unmodified 1382.6314 0.6313879 3398 Q8NBN7 RDH13 Retinol dehydrogenase 13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.894 29.089 2 4.7101E-09 31045 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 112.13 103.91 257190000 0 0 0 13731000 11440000 17175000 15130000 20121000 14966000 30092000 27788000 23392000 30119000 19087000 34147000 3754 3398 3379 32382;32383;32384;32385;32386;32387;32388;32389;32390;32391;32392;32393 25503;25504;25505;25506;25507;25508;25509;25510;25511;25512;25513;25514;25515;25516 25513 14 APAPEAEDEEVARR Unmodified 1538.7325 0.73249893 3398 Q8NBN7 RDH13 Retinol dehydrogenase 13 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 25.596 25.715 3 0.00033262 27357 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 65.563 54.301 23621000 0 0 0 0 0 6004900 5763600 0 5487300 0 0 0 0 6364900 0 3755 3398 3380 32394;32395;32396;32397;32398 25517;25518;25519;25520 25517 3 APAPELLPANVAGR Unmodified 1374.7619 0.76194857 3114 Q7Z6J9 TSEN54 tRNA-splicing endonuclease subunit Sen54 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 70.624 70.673 2 0.0046425 81159 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 51.762 36.147 35221000 0 0 0 1646900 2237600 4015300 2106700 0 0 3962500 4119500 4284300 2584400 3569900 6694300 3756 3114 3381 32399;32400;32401;32402;32403;32404;32405;32406;32407;32408 25521;25522;25523;25524;25525 25525 5 APAPFRPASER Unmodified 1197.6255 0.62545508 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.459 26.658 3 0.0026878 28531 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 87.298 77.21 555810000 0 0 0 20903000 43514000 46885000 55099000 34660000 36973000 47595000 47683000 73577000 38369000 49183000 61371000 3757 4285 3382 32409;32410;32411;32412;32413;32414;32415;32416;32417;32418;32419;32420 25526;25527;25528;25529;25530;25531;25532;25533;25534;25535;25536 25534 2 APAPKPELIAAEK Unmodified 1333.7606 0.76055158 5236 Q9Y5K6 CD2AP CD2-associated protein yes yes 0 0 1 By MS/MS 3 0 1 1 48.225 43.349 3 0.020173 53778 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 44.691 28.219 16129000 0 16129000 0 0 0 0 0 0 0 0 0 0 0 0 0 3758 5236 3383 32421 25537 25537 0 APAPPPKPETPEK Unmodified 1357.7242 0.72416608 4999 Q9ULL5 PRR12 Proline-rich protein 12 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.273 23.478 3 0.0087394 24630 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 37.248 30.811 90370000 0 0 0 5045400 5680400 5277100 5553100 5951800 4507300 5982100 8674900 10931000 11157000 8066200 13545000 3759 4999 3384 32422;32423;32424;32425;32426;32427;32428;32429;32430;32431;32432;32433 25538;25539;25540;25541;25542;25543;25544;25545 25540 8 APAPPVLSPK Unmodified 975.57532 0.57531699 3418 Q8NDI1 EHBP1 EH domain-binding protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 45.922 46.025 2 0.010195 51685 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 56.434 31.511 57930000 0 0 0 4815700 4530600 0 6488700 5266100 0 7523700 9663000 0 10433000 0 9208900 3760 3418 3385 32434;32435;32436;32437;32438;32439;32440;32441;32442 25546;25547;25548;25549;25550;25551 25547 6 APAPVTPPAPVQNK Unmodified 1385.7667 0.76669959 2097;913 Q03468;P0DP91 ERCC6 DNA excision repair protein ERCC-6 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.555 45.724 2 0.0015588 50246 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 57.267 52.969 199820000 0 0 0 13461000 15143000 16085000 13571000 11847000 14763000 21292000 16092000 16546000 20060000 14458000 26499000 3761 2097;913 3386 32443;32444;32445;32446;32447;32448;32449;32450;32451;32452;32453;32454 25552;25553 25553 2 APAPVTYGSLLL Unmodified 1200.6754 0.67542497 4335 Q9H0R1 AP5M1 AP-5 complex subunit mu-1 yes yes 0 0 0 By MS/MS 2 0 1 1 95.825 90.99 2 0.0020314 112725 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.212 70.373 15803000 0 15803000 0 0 0 0 0 0 0 0 0 0 0 0 0 3762 4335 3387 32455 25554 25554 1 APAPVVLGSPVVLGPPVGQAR Unmodified 1980.152 0.15203097 3001 Q6ZN55 ZNF574 Zinc finger protein 574 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 1 1 1 1 2 2 2 2 1 87.596 87.667 2;3 0.00077265 101446 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.915 34.206 38972000 0 0 0 1328700 2652700 2971400 2549500 2039100 1952500 7014700 0 5485000 3098200 4524800 5355200 3763 3001 3388 32456;32457;32458;32459;32460;32461;32462;32463;32464;32465;32466;32467;32468;32469;32470 25555;25556;25557;25558;25559;25560;25561;25562;25563;25564;25565 25557 11 APAQNPELTPGPAPAGPTPAPETNAPNHPSPAEYVEVLQELQR Unmodified 4452.1986 0.19860641 1502 P46379 BAG6 Large proline-rich protein BAG6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 91.443 91.596 4 1.0584E-18 106276 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 40.777 36.893 10164000 0 0 0 0 0 0 0 0 0 3153600 1589700 0 0 0 5420900 3764 1502 3389 32471;32472;32473 25566;25567;25568;25569;25570 25567 5 APAQTPAEPTPGYEVGQRK Unmodified 1996.0014 0.0014035686 1602 P49815 TSC2 Tuberin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.558 39.738 3 5.7363E-54 43194 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 117.78 102.59 142870000 0 0 0 7836300 10000000 11347000 10044000 9647100 10333000 14045000 12131000 18796000 14604000 8303800 15785000 3765 1602 3390 32474;32475;32476;32477;32478;32479;32480;32481;32482;32483;32484;32485 25571;25572;25573;25574;25575;25576;25577;25578;25579;25580;25581;25582;25583;25584;25585 25575 15 APARPGDQPPPPPQR Unmodified 1579.8219 0.82192306 3146 Q86UD0 SAPCD2 Suppressor APC domain-containing protein 2 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 23.581 23.695 3 0.0034572 23671 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 42.568 31.513 17921000 0 0 0 1828200 1852500 0 2404100 2284300 0 2613900 0 0 0 2463200 4474800 3766 3146 3391 32486;32487;32488;32489;32490;32491;32492 25586;25587 25587 2 APASEEEFQFLR Unmodified 1422.6779 0.67794416 1253 P29590 PML Protein PML yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.663 76.718 2 5.0929E-09 88054 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 168.83 154.62 151580000 0 0 0 7296800 7211400 10524000 10596000 9060800 8941200 14846000 18915000 17979000 0 14211000 32001000 3767 1253 3392 32493;32494;32495;32496;32497;32498;32499;32500;32501;32502;32503;32504 25588;25589;25590;25591;25592;25593;25594;25595;25596;25597;25598;25599 25591 12 APASSLHTQEAGR Unmodified 1323.6531 0.6531264 659 O95425 SVIL Supervillin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.929 13.085 3 5.6605E-05 12395 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 80.469 67.842 75623000 0 0 0 5435000 6529000 7485800 6730100 4243100 3685000 6710100 5665000 8840000 8452800 4590800 7256200 3768 659 3393 32505;32506;32507;32508;32509;32510;32511;32512;32513;32514;32515;32516 25600;25601;25602;25603;25604;25605;25606;25607;25608;25609;25610;25611 25601 9 APASSSSNPEEVQK Unmodified 1429.6685 0.66850169 4215 Q9BWU0 SLC4A1AP Kanadaptin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 14.071 14.234 2 7.6822E-19 13463 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 147.71 126.84 127430000 0 0 0 5309700 7579700 6680900 5927600 6626600 4721800 11561000 13169000 16144000 14027000 12422000 23258000 3769 4215 3394 32517;32518;32519;32520;32521;32522;32523;32524;32525;32526;32527;32528;32529 25612;25613;25614;25615;25616;25617;25618;25619;25620;25621;25622;25623;25624 25622 13 APASVLPAATPR Unmodified 1149.6506 0.6506072 990 P13861 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.946 50.1 2 4.8733E-06 56600 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 123.51 94.817 294880000 0 0 0 15858000 19137000 7535600 20336000 18492000 19682000 21605000 34141000 46056000 24805000 27473000 39764000 3770 990 3395 32530;32531;32532;32533;32534;32535;32536;32537;32538;32539;32540;32541 25625;25626;25627;25628;25629;25630;25631;25632;25633;25634;25635;25636 25633 11 APAVQDLLTR Unmodified 1082.6084 0.60840804 4641 Q9NU22 MDN1 Midasin yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 66.723 66.728 2 0.0038686 76776 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 74.92 42.6 35417000 0 0 0 2132000 2713100 3436800 3514000 5098400 1931000 2939400 4650200 0 3953200 5049300 0 3771 4641 3396 32542;32543;32544;32545;32546;32547;32548;32549;32550;32551 25637;25638;25639 25639 3 APDAEELDK Unmodified 986.45566 0.45565537 4921 Q9UI42 CPA4 Carboxypeptidase A4 yes yes 0 0 0 By MS/MS 10 0 1 1 22.826 22.656 2 0.026691 23936 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 49.715 30.933 7272200 0 0 0 7272200 0 0 0 0 0 0 0 0 0 0 0 3772 4921 3397 32552 25640 25640 1 APDCHGPVLK Unmodified 1092.5386 0.53861391 5219 Q9Y546 LRRC42 Leucine-rich repeat-containing protein 42 yes yes 0 0 0 By MS/MS 2 0 1 1 23.15 20.234 2 0.0025453 25742 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 103.56 59.116 6875900 0 0 6875900 0 0 0 0 0 0 0 0 0 0 0 0 3773 5219 3398 32553 25641 25641 1 APDDLVAPVVK Unmodified 1122.6285 0.62847478 303 O43172 PRPF4 U4/U6 small nuclear ribonucleoprotein Prp4 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 62.78 61.648 2 6.6748E-16 70682 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 158.76 142.22 1087300000 0 753730000 2351600 0 44493000 0 48113000 42809000 45721000 0 0 88809000 61301000 0 0 3774 303 3399 32554;32555;32556;32557;32558;32559;32560;32561 25642;25643;25644;25645;25646;25647;25648 25645 6 APDFLPLLNK Unmodified 1126.6386 0.63864553 534 O75695 RP2 Protein XRP2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 86.961 87.069 2 0.016645 100644 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.418 40.555 23148000 0 0 0 0 1485800 1752100 1511300 1488100 1641500 2184600 1804900 2925400 2829800 1929800 3594600 3775 534 3400 32562;32563;32564;32565;32566;32567;32568;32569;32570;32571;32572 25649;25650;25651;25652;25653;25654;25655;25656 25650 8 APDFVFYAPR Unmodified 1181.5869 0.58694431 1198;1017;1345 P26038;P35241;P15311 MSN;RDX;EZR Moesin;Radixin;Ezrin no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.614 79.672 2 0.0016488 91624 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 104.06 93.826 327390000 0 0 0 11612000 5959800 7933400 7130300 8080200 3971000 12530000 49888000 43848000 9239100 31923000 135280000 3776 1198;1345;1017 3401 32573;32574;32575;32576;32577;32578;32579;32580;32581;32582;32583;32584 25657;25658;25659;25660;25661;25662;25663;25664;25665;25666;25667;25668 25660 11 APDGQTVAGEVMGPQRPR Unmodified 1864.9214 0.92137911 2734 Q5JSH3 WDR44 WD repeat-containing protein 44 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 49.51 49.903 3 1.8823E-07 55526 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 78.234 58.845 160800000 0 0 0 0 0 0 0 8898800 8973500 0 21017000 35339000 14029000 20231000 52308000 3777 2734 3402 32585;32586;32587;32588;32589;32590;32591;32592;32593 25669;25670;25671;25672;25673;25674;25675;25676;25677;25678;25679;25680;25681 25678 12 APDGQTVAGEVMGPQRPR Oxidation (M) 1880.9163 0.91629373 2734 Q5JSH3 WDR44 WD repeat-containing protein 44 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 38.281 38.465 3 4.8319E-05 42634 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 61.962 50.442 81738000 0 0 0 0 6091500 0 8886300 4288700 0 10426000 0 0 11144000 12718000 28183000 3778 2734 3402 32594;32595;32596;32597;32598;32599;32600 25682;25683;25684;25685;25686;25687;25688 25682 4374 7 APDGSWDSEPQK Unmodified 1315.5681 0.56805936 239 O15013 ARHGEF10 Rho guanine nucleotide exchange factor 10 yes yes 0 0 0 By MS/MS 10 0 1 1 29.279 29.974 2 0.049764 31528 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.731 21.579 2112800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2112800 3779 239 3403 32601 25689 25689 1 APDGYIVK Unmodified 861.45962 0.45961853 3608 Q92499 DDX1 ATP-dependent RNA helicase DDX1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.731 32.916 2 0.02509 35791 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 58.981 30.874 487810000 0 0 0 42086000 21503000 38912000 32236000 28801000 22775000 54414000 47432000 59406000 36757000 34659000 68830000 3780 3608 3404 32602;32603;32604;32605;32606;32607;32608;32609;32610;32611;32612;32613 25690;25691;25692 25691 3 APDLFPTDFK Unmodified 1149.5706 0.57062555 2034 Q00403 GTF2B Transcription initiation factor IIB yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.585 79.644 2 0.0014272 91935 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 91.867 81.001 407510000 0 0 0 25529000 28040000 30624000 23824000 28670000 19063000 33232000 50312000 44237000 33383000 32858000 57736000 3781 2034 3405 32614;32615;32616;32617;32618;32619;32620;32621;32622;32623;32624;32625 25693;25694;25695;25696;25697;25698;25699;25700;25701;25702;25703;25704 25693 12 APDMSSSEEFPSFGAQVAPK Oxidation (M) 2096.9361 0.9360857 2033 Q00341 HDLBP Vigilin yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 75.493 74.453 2 0 91716 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 287.48 275.9 721220000 7581700 375690000 0 18686000 20156000 32961000 23267000 19007000 18293000 39650000 32348000 41448000 27802000 28245000 36085000 3782 2033 3406 32626;32627;32628;32629;32630;32631;32632;32633;32634;32635;32636;32637;32638;32639;32640 25705;25706;25707;25708;25709;25710;25711;25712;25713;25714;25715;25716;25717;25718;25719 25709 3283 15 APDMSSSEEFPSFGAQVAPK Unmodified 2080.9412 0.94117108 2033 Q00341 HDLBP Vigilin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 6.17 3.85 2 1 3 1 2 1 2 80.195 77.607 2;3 0 96143 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 332.06 326.56 1488200000 8275700 1338500000 0 0 0 0 0 0 0 0 0 0 0 29917000 111510000 3783 2033 3406 32641;32642;32643;32644;32645;32646 25720;25721;25722;25723;25724;25725 25720 5 APDNPFHGIVSK Unmodified 1280.6513 0.65133548 2805 Q5VIR6 VPS53 Vacuolar protein sorting-associated protein 53 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 5 2 1 2 63.103 57.092 2;3 0.0099516 76838 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.266 33.702 305040000 244380000 22447000 38207000 0 0 0 0 0 0 0 0 0 0 0 0 3784 2805 3407 32647;32648;32649;32650;32651 25726;25727;25728;25729 25726 3 APDVDVNIAGPDAALK Unmodified 1564.8097 0.80968662 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 3 1 1 1 1 1 1 1 1 1 1 74.926 73.507 2;3 3.6165E-58 90951 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 198.37 191.09 444650000 7752800 198840000 0 0 18796000 0 18531000 18176000 20753000 20963000 23172000 31976000 24279000 24767000 36650000 3785 2172 3408 32652;32653;32654;32655;32656;32657;32658;32659;32660;32661;32662;32663;32664;32665 25730;25731;25732;25733;25734;25735;25736;25737;25738;25739;25740;25741;25742;25743;25744;25745;25746 25734 15 APDVEGQGLDWSLK Unmodified 1513.7413 0.7412727 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.92 76.98 2 9.8834E-33 88850 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 162.68 145.77 294680000 0 0 0 11480000 14579000 15127000 24049000 26129000 18009000 19932000 20654000 31538000 26424000 29958000 56805000 3786 2172 3409 32666;32667;32668;32669;32670;32671;32672;32673;32674;32675;32676;32677 25747;25748;25749;25750;25751;25752;25753;25754;25755;25756;25757;25758 25756 12 APDVEQAIEVLTR Unmodified 1439.762 0.76200815 1406;2357 P39880;Q13948 CUX1 Homeobox protein cut-like 1;Protein CASP no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 89.579 89.65 2 3.3844E-16 103926 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 179.19 147.7 72420000 0 0 0 1163400 3376600 4247900 3272400 5202500 4568200 10268000 7599900 6925800 3970800 5501900 16323000 3787 1406;2357 3410 32678;32679;32680;32681;32682;32683;32684;32685;32686;32687;32688;32689 25759;25760;25761;25762;25763;25764;25765;25766;25767;25768;25769;25770;25771;25772 25762 14 APDVEQAIEVLTRSSLEVELAAK Unmodified 2467.317 0.31698363 1406;2357 P39880;Q13948 CUX1 Homeobox protein cut-like 1;Protein CASP no no 0 0 1 By MS/MS 2.5 0.5 1 1 2 100.84 95.004 3 0.00020066 120201 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.133 55.461 11268000 11268000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3788 1406;2357 3411 32690;32691 25773;25774 25774 2 APEAAAAEREEVAYDPEDETILEEAK Unmodified 2845.3141 0.31414267 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 74.546 74.662 3 2.579E-76 85987 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 123.79 117.22 127220000 0 0 0 0 7623600 9414700 6948800 10860000 7597700 14163000 16208000 23835000 0 0 30567000 3789 4139 3412 32692;32693;32694;32695;32696;32697;32698;32699;32700;32701 25775;25776;25777;25778;25779;25780;25781;25782;25783;25784;25785;25786;25787;25788 25784 14 APEAAVSEDGK Unmodified 1072.5037 0.50366819 3432 Q8NEY1 NAV1 Neuron navigator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.312 14.474 2 0.00029768 13303 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 103.01 51.151 75745000 0 0 0 3953600 4302700 6660700 3251900 5637900 5058500 7088400 7235700 7211900 6848800 7326600 11169000 3790 3432 3413 32702;32703;32704;32705;32706;32707;32708;32709;32710;32711;32712;32713 25789;25790;25791;25792;25793;25794;25795;25796;25797;25798;25799;25800 25792 10 APEAAVSEDGKSDDELLSSK Unmodified 2046.9593 0.95932356 3432 Q8NEY1 NAV1 Neuron navigator 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.3 2.1 1 9 1 1 1 1 1 1 1 1 1 1 46.989 46.535 3 1.7356E-11 52908 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 82.609 79.005 59157000 0 2584800 0 4161700 7316800 4163700 6276600 6860900 0 6135100 8620700 0 8415800 4621100 0 3791 3432 3414 32714;32715;32716;32717;32718;32719;32720;32721;32722;32723 25801;25802;25803;25804;25805;25806;25807;25808;25809;25810 25809 10 APEDAGPQPGSYEIRHYGPAK Unmodified 2239.0658 0.065794739 5256 Q9Y5Z4 HEBP2 Heme-binding protein 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 51.956 45.967 4 1.2867E-17 62997 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.088 72.635 79641000 64446000 0 15196000 0 0 0 0 0 0 0 0 0 0 0 0 3792 5256 3415 32724;32725 25811;25812;25813;25814 25812 4 APEEELPPLDPEEIRK Unmodified 1860.9469 0.94690838 3276 Q8IY67 RAVER1 Ribonucleoprotein PTB-binding 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 72.693 72.872 3 8.8393E-05 84013 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 57.148 52.044 79461000 0 0 0 0 0 9879500 0 12343000 8973300 12401000 0 12589000 0 9519400 13757000 3793 3276 3416 32726;32727;32728;32729;32730;32731;32732 25815;25816;25817;25818;25819 25816 5 APEESSEDVTK Unmodified 1190.5303 0.53027687 2718 Q58WW2 DCAF6 DDB1- and CUL4-associated factor 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.385 12.536 2 0.0012585 11775 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 73.985 67.09 25980000 0 0 0 1580000 993920 1661600 1646500 1441400 1480000 2841400 2611100 3612200 2355800 2170200 3585700 3794 2718 3417 32733;32734;32735;32736;32737;32738;32739;32740;32741;32742;32743;32744 25820;25821;25822;25823;25824;25825;25826;25827;25828 25828 9 APEETPPATEK Unmodified 1168.5612 0.56118307 2299 Q13487 SNAPC2 snRNA-activating protein complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.083 16.259 2 1.9668E-05 15864 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 128.27 110.76 70690000 0 0 0 3428800 4205300 4520600 4720300 4524400 4783800 5547000 7287800 8959500 6021000 7123700 9568000 3795 2299 3418 32745;32746;32747;32748;32749;32750;32751;32752;32753;32754;32755;32756 25829;25830;25831;25832;25833;25834;25835;25836;25837;25838;25839;25840;25841 25837 13 APEFPSYK Unmodified 937.45453 0.45453316 3157 Q86UV5 USP48 Ubiquitin carboxyl-terminal hydrolase 48 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 50.395 45.543 2 0.025852 58940 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.809 55.611 171410000 0 169340000 2066500 0 0 0 0 0 0 0 0 0 0 0 0 3796 3157 3419 32757;32758;32759 25842;25843;25844 25842 2 APEGGEGAQPVPGHAR Unmodified 1528.7383 0.73825301 2989 Q6W2J9 BCOR BCL-6 corepressor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 17.152 17.3 3 0.0025112 17761 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 30.739 22.983 74724000 0 0 0 4970100 4552300 6786600 4613200 6423600 4082600 5773400 0 10173000 8704800 7208100 11436000 3797 2989 3420 32760;32761;32762;32763;32764;32765;32766;32767;32768;32769;32770 25845;25846;25847;25848;25849;25850;25851;25852;25853;25854;25855;25856;25857;25858 25858 13 APEGGEGAQPVPGHARK Unmodified 1656.8332 0.83321603 2989 Q6W2J9 BCOR BCL-6 corepressor yes yes 0 0 1 By MS/MS 2 0 2 2 15.806 11.693 2;3 0.003076 17150 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.439 55.25 42735000 42735000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3798 2989 3421 32771;32772 25859;25860 25860 2 APEIIESLK Unmodified 998.56481 0.56481189 473 O75182 SIN3B Paired amphipathic helix protein Sin3b yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 62.916 62.554 2 0.0073568 81024 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.162 72.463 106310000 0 39919000 0 4504000 3400900 3903100 4808200 4887900 3768300 6288300 5503900 9389300 6057600 5547700 8337100 3799 473 3422 32773;32774;32775;32776;32777;32778;32779;32780;32781;32782;32783;32784;32785 25861;25862;25863;25864;25865;25866;25867;25868;25869 25862 9 APEILLGCK Unmodified 999.5423 0.54230231 1180 P24941 CDK2 Cyclin-dependent kinase 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 56.673 56.758 2 0.027043 63644 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 49.57 27.045 21735000 0 0 0 0 3557800 3012900 3011800 0 0 0 0 7213700 0 4938500 0 3800 1180 3423 32786;32787;32788;32789;32790 25870;25871 25870 2 APEIMLNSK Oxidation (M) 1017.5165 0.51648149 1236;1215 P27361;P28482 MAPK3;MAPK1 Mitogen-activated protein kinase 3;Mitogen-activated protein kinase 1 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 37.772 37.915 2 0.0034777 41199 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 78.149 36.72 161070000 0 0 0 14562000 15545000 26413000 0 0 12561000 25214000 0 23860000 0 19297000 23619000 3801 1215;1236 3424 32791;32792;32793;32794;32795;32796;32797;32798;32799 25872;25873;25874;25875;25876;25877 25875 1785 5 APEIMLNSK Unmodified 1001.5216 0.52156686 1236;1215 P27361;P28482 MAPK3;MAPK1 Mitogen-activated protein kinase 3;Mitogen-activated protein kinase 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 44.348 44.619 2 0.0030243 49545 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 126.62 77.865 100130000 0 0 0 0 0 16610000 10458000 7214400 0 10464000 15240000 0 0 11862000 28282000 3802 1215;1236 3424 32800;32801;32802;32803;32804;32805;32806;32807;32808;32809;32810 25878;25879;25880;25881;25882;25883;25884;25885;25886;25887;25888 25883 11 APELFSYIAK Unmodified 1137.607 0.60701105 3295 Q8IZH2 XRN1 5'-3' exoribonuclease 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.845 80.905 2 0.0062946 92810 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 75.378 65.299 49707000 0 0 0 1437300 2110800 3510400 3439300 3313000 3372300 4916700 4381400 4357700 3931300 5485300 9451900 3803 3295 3425 32811;32812;32813;32814;32815;32816;32817;32818;32819;32820;32821;32822 25889;25890;25891;25892;25893;25894;25895;25896;25897;25898 25896 10 APELLLGAK Unmodified 910.54877 0.54876789 1118;5069 P21127;Q9UQ88 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 60.081 60.244 2 0.015842 68666 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 57.047 20.491 160400000 0 0 0 7969900 0 15561000 13628000 12440000 11359000 17285000 18646000 16720000 14714000 14795000 17283000 3804 1118;5069 3426 32823;32824;32825;32826;32827;32828;32829;32830;32831;32832;32833 25899;25900;25901;25902;25903 25902 5 APELLLGAR Unmodified 938.55492 0.5549159 1566 P49336 CDK8 Cyclin-dependent kinase 8 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 62.991 63.122 2 0.006387 72113 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 75.213 52.688 4003300 0 0 0 0 0 0 4003300 0 0 0 0 0 0 0 0 3805 1566 3427 32834;32835;32836;32837 25904;25905;25906;25907 25905 4 APELPNTSSSPSLK Unmodified 1426.7304 0.73037367 5027 Q9UN79 SOX13 Transcription factor SOX-13 yes yes 0 0 0 By MS/MS By MS/MS 5 3.56 1 1 1 2 1 54.339 50.56 2 0.00471 64546 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.903 61.877 22582000 0 18294000 0 4288400 0 0 0 0 0 0 0 0 0 0 0 3806 5027 3428 32838;32839;32840 25908;25909 25908 2 APENVTCTIPDGVPIDITVK Unmodified 2138.0929 0.092920692 5245 Q9Y5Q9 GTF3C3 General transcription factor 3C polypeptide 3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching 9.12 2.32 1 7 1 1 1 1 1 1 1 1 86.278 85.948 2 0.00022738 99651 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 68.83 61.106 35666000 0 3524100 0 0 2323300 0 0 0 0 7449500 3639900 4207600 2841400 3789700 7890600 3807 5245 3429 32841;32842;32843;32844;32845;32846;32847;32848 25910;25911;25912;25913 25913 4 APEPHVEEDDDDELDSK Unmodified 1938.7967 0.79667491 1690 P52566 ARHGDIB Rho GDP-dissociation inhibitor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 38.697 34.913 3 0.020079 46781 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 38.227 33.984 39901000 10007000 22025000 0 0 0 0 0 0 0 0 0 0 7868500 0 0 3808 1690 3430 32849;32850;32851 25914;25915;25916 25915 2 APEPLSSLK Unmodified 940.52295 0.52294707 470 O75175 CNOT3 CCR4-NOT transcription complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 8.25 3.03 1 3 1 1 1 1 48.187 46.871 2 0.0032531 52819 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 90.657 42.095 86749000 0 30485000 0 14249000 0 20860000 0 21155000 0 0 0 0 0 0 0 3809 470 3431 32852;32853;32854;32855 25917;25918;25919;25920;25921;25922 25921 5 APEPPPALIVR Unmodified 1158.6761 0.67609367 4421 Q9H6S0 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.953 67.036 2 0.041013 77079 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 40.882 37.31 41986000 0 0 0 2101700 2924600 3573400 2342300 2543100 2218600 4382600 4206700 4954200 4023000 3549200 5166200 3810 4421 3432 32856;32857;32858;32859;32860;32861;32862;32863;32864;32865;32866;32867 25923 25923 1 APEPTDARK Unmodified 983.50361 0.50360861 360 O43719 HTATSF1 HIV Tat-specific factor 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 7.0999 4.0163 2 0.010611 5965 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.83 40.353 254780000 30085000 210560000 14135000 0 0 0 0 0 0 0 0 0 0 0 0 3811 360 3433 32868;32869;32870;32871 25924;25925;25926 25924 2 APEPTPQQVAQQQ Unmodified 1420.6947 0.69465686 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 39.226 39.561 2 0.00080675 43067 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.662 66.027 65889000 0 0 0 0 0 8940800 4873400 6100300 0 8457500 7756500 7895700 6683100 4811900 10370000 3812 2451 3434 32872;32873;32874;32875;32876;32877;32878;32879;32880;32881 25927;25928;25929;25930;25931;25932;25933;25934 25929 8 APEQEQAAPGPAAGGEAPK Unmodified 1774.8486 0.84859132 1993 P80723 BASP1 Brain acid soluble protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.65 3.66 2 6 2 24 3 5 2 2 2 2 2 2 2 2 2 2 2 2 2 33.826 33.096 2;3 2.5123E-95 34436 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 189.1 135.85 3211500000 390880000 160340000 4755600 99876000 112200000 130510000 112430000 132700000 133230000 201330000 375120000 433600000 219270000 250160000 455080000 3813 1993 3435 32882;32883;32884;32885;32886;32887;32888;32889;32890;32891;32892;32893;32894;32895;32896;32897;32898;32899;32900;32901;32902;32903;32904;32905;32906;32907;32908;32909;32910;32911;32912;32913;32914;32915 25935;25936;25937;25938;25939;25940;25941;25942;25943;25944;25945;25946;25947;25948;25949;25950;25951;25952;25953;25954;25955;25956;25957;25958;25959;25960;25961;25962;25963;25964;25965;25966;25967;25968;25969 25940 28 APEQRPAPNAAPVDPTLR Unmodified 1898.9963 0.99625861 2916 Q6P1J9 CDC73 Parafibromin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.958 47.124 3 1.1188E-07 52805 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 92.633 88.412 206270000 0 0 0 9198300 11816000 11812000 11953000 9757900 8898400 19502000 18298000 27448000 28570000 18787000 30229000 3814 2916 3436 32916;32917;32918;32919;32920;32921;32922;32923;32924;32925;32926;32927 25970;25971;25972;25973;25974;25975;25976;25977;25978;25979;25980 25975 11 APESLFLLEEMR Oxidation (M) 1449.7174 0.71736614 2215 Q12965 MYO1E Unconventional myosin-Ie yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 81.861 81.997 2 0.0039922 94979 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 82.417 69.461 26224000 0 0 0 0 0 5862200 1953000 2617400 3143300 0 0 0 2006200 2495800 8145700 3815 2215 3437 32928;32929;32930;32931;32932;32933;32934 25981;25982 25981 3603 1 APESLFLLEEMR Unmodified 1433.7225 0.72245152 2215 Q12965 MYO1E Unconventional myosin-Ie yes yes 0 0 0 By MS/MS 10 0 1 1 89.524 89.668 2 0.0016435 103804 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.19 38.886 2492900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2492900 3816 2215 3437 32935 25983 25983 1 APETDDSFSDVDCHSNQEDTGCK Unmodified 2612.9868 0.98675365 2856 Q68D20 PMS2CL Protein PMS2CL yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 38.146 37.603 3 3.6371E-158 46807 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 208.44 208.31 107680000 0 36811000 0 3795700 4384900 4903900 5987400 5558600 4329900 5713700 6489900 9165600 6596500 4889300 9058300 3817 2856 3438 32936;32937;32938;32939;32940;32941;32942;32943;32944;32945;32946;32947;32948;32949 25984;25985;25986;25987;25988;25989;25990;25991;25992;25993;25994;25995;25996;25997;25998;25999 25988 16 APEVNLNAPDVDVHGPDWNLK Unmodified 2299.1233 0.12330962 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 83.936 80.45 3 6.2519E-24 100132 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.16 101.56 111030000 0 103700000 7325800 0 0 0 0 0 0 0 0 0 0 0 0 3818 2172 3439 32950;32951;32952 26000;26001;26002;26003 26000 4 APEYLHR Unmodified 884.45045 0.45045083 5028 Q9UN86 G3BP2 Ras GTPase-activating protein-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 18.514 18.739 2 0.023354 19133 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 89.673 57.56 74543000 0 0 0 0 5192700 7035400 6455200 5143300 5044600 8785800 6625000 7376900 7162400 4171200 11550000 3819 5028 3440 32953;32954;32955;32956;32957;32958;32959;32960;32961;32962;32963 26004;26005;26006;26007 26007 4 APFDLFENK Unmodified 1079.5288 0.52876073 862 P08238;Q58FF7 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 2 1 1 1 1 1 1 1 77.907 77.976 2 0.00269 89988 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 137.9 108.1 676960000 0 0 0 42106000 20309000 78683000 29257000 27824000 29881000 60445000 86398000 54987000 41497000 49630000 155940000 3820 862 3441 32964;32965;32966;32967;32968;32969;32970;32971;32972;32973;32974;32975;32976 26008;26009;26010;26011;26012;26013;26014;26015;26016;26017;26018;26019;26020 26017 13 APFDLFENKK Unmodified 1207.6237 0.62372375 862 P08238;Q58FF7 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 67.042 67.26 3 0.021056 76208 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 29.544 22.265 53536000 0 0 0 0 0 6217500 4125900 3672900 1633200 4156300 6329100 5753600 4094100 4053900 13499000 3821 862 3442 32977;32978;32979;32980;32981;32982;32983;32984;32985;32986 26021 26021 1 APFDLFENR Unmodified 1107.5349 0.53490874 850 P07900 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.044 79.103 2 1.4086E-05 91468 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 153.71 142.49 327270000 0 0 0 14105000 8783700 38787000 14329000 14194000 13563000 25891000 34765000 28917000 22360000 26631000 84941000 3822 850 3443 32987;32988;32989;32990;32991;32992;32993;32994;32995;32996;32997;32998 26022;26023;26024;26025;26026;26027;26028;26029;26030;26031;26032;26033 26022 12 APFDLFENRK Unmodified 1235.6299 0.62987176 850 P07900 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 68.74 68.924 3 0.0021408 79153 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 64.374 51.282 62630000 0 0 0 0 0 13170000 0 0 9547000 12007000 0 0 0 0 27906000 3823 850 3444 32999;33000;33001;33002 26034;26035 26034 2 APFEAVK Unmodified 760.41194 0.41194006 3061 Q7LBC6 KDM3B Lysine-specific demethylase 3B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.422 29.614 2 0.030787 31470 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 74.415 74.415 667490000 0 0 0 38864000 35751000 47141000 51357000 46152000 38814000 60811000 66876000 73427000 52910000 54867000 100520000 3824 3061 3445 33003;33004;33005;33006;33007;33008;33009;33010;33011;33012;33013;33014 26036 26036 1 APFNQEGQSTGPPPLIPGLGQQGAQGR Unmodified 2701.3572 0.35722573 4293 Q9C0J8 WDR33 pre-mRNA 3' end processing protein WDR33 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 82.703 82.737 3 1.9765E-07 95559 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.783 29.935 30406000 0 0 0 1158200 2023300 3865900 2616200 3217000 2419400 0 0 4483100 0 0 10623000 3825 4293 3446 33015;33016;33017;33018;33019;33020;33021;33022 26037;26038 26037 2 APFQTSGENEK Unmodified 1206.5517 0.55168102 2761 Q5SWA1 PPP1R15B Protein phosphatase 1 regulatory subunit 15B yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 22.79 18.833 2 0.030219 24949 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 59.931 41.151 10090000 0 10090000 0 0 0 0 0 0 0 0 0 0 0 0 0 3826 2761 3447 33023;33024 26039 26039 1 APFYRPLAPELR Unmodified 1428.7878 0.78776939 26 A6NED2 RCCD1 RCC1 domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 69.747 70.073 3 0.029988 79729 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 26.124 17.17 11114000 0 0 0 0 0 0 0 0 0 0 0 0 0 2561100 8553300 3827 26 3448 33025;33026 26040 26040 1 APGAAPSAAAK Unmodified 910.48723 0.48723027 4227 Q9BXK1 KLF16 Krueppel-like factor 16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 9.9636 10.268 2 0.0082657 8566 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 51.949 15.248 9250100 0 0 0 0 0 0 0 1436300 0 0 1605700 2226000 0 0 3982100 3828 4227 3449 33027;33028;33029;33030 26041;26042;26043 26043 3 APGAEEDDSELQR Unmodified 1415.6165 0.61646612 2699 Q53F19 C17orf85 Uncharacterized protein C17orf85 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 13 2 1 1 1 1 1 1 1 1 1 1 1 24.808 25.017 2 8.2302E-07 26902 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 94.297 76.861 35994000 0 0 0 3941800 2701500 2198000 2373100 3318600 0 3731200 2679500 5643500 1305700 2191200 5910200 3829 2699 3450 33031;33032;33033;33034;33035;33036;33037;33038;33039;33040;33041;33042;33043 26044;26045;26046;26047;26048;26049;26050;26051;26052;26053;26054;26055 26044 12 APGAEEYAQQDVLK Unmodified 1517.7362 0.73618733 888 P09543 CNP 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 52.949 52.311 2 1.2851E-201 59258 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 234.65 188.49 549570000 0 199970000 0 18844000 16101000 32140000 19639000 26311000 23554000 34210000 41050000 24546000 32200000 31246000 49756000 3830 888 3451 33044;33045;33046;33047;33048;33049;33050;33051;33052;33053;33054;33055;33056;33057 26056;26057;26058;26059;26060;26061;26062;26063;26064;26065;26066 26064 8 APGAEEYAQQDVLKK Unmodified 1645.8312 0.83115034 888 P09543 CNP 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 44.087 44.296 3 2.3866E-19 50179 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 82.663 68.359 161140000 0 0 0 0 20874000 0 13643000 23488000 0 18479000 23435000 0 25089000 16638000 19491000 3831 888 3452 33058;33059;33060;33061;33062;33063;33064;33065;33066 26067;26068;26069;26070;26071;26072;26073;26074;26075;26076;26077;26078;26079 26079 13 APGAGLGQDR Unmodified 940.47264 0.47264284 1621 P50402 EMD Emerin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.7906 7.9175 2 0.015412 5769 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 50.127 37.138 126070000 0 0 0 6370000 5575300 13603000 3336300 7050500 21198000 12413000 24385000 3933100 11352000 8200500 8652200 3832 1621 3453 33067;33068;33069;33070;33071;33072;33073;33074;33075;33076;33077;33078 26080;26081;26082;26083 26083 4 APGAIGPYSQAVLVDR Unmodified 1612.8573 0.85730551 1700 P52758 HRSP12 Ribonuclease UK114 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 74.391 74.567 2 1.1473E-15 85429 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 97.463 82.197 49720000 0 0 0 0 0 3813300 0 0 0 5096700 8169100 7773800 0 7116700 17751000 3833 1700 3454 33079;33080;33081;33082;33083;33084 26084;26085;26086;26087;26088 26085 5 APGARGPGPEGGGGGSYFSGQGSDTGASLK Unmodified 2678.2321 0.2320848 1052 P17275 JUNB Transcription factor jun-B yes yes 0 0 1 By MS/MS 2 0 1 1 59.353 51.127 3 2.6586E-57 69652 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.94 101.43 19121000 19121000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3834 1052 3455 33085 26089;26090;26091 26091 3 APGCVLSNPDQK Unmodified 1284.6132 0.61323542 869 P08651 NFIC Nuclear factor 1 C-type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 32.32 31.809 2 6.2636E-08 35013 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 142.83 131.46 365560000 0 141940000 0 11130000 10269000 22060000 12301000 11885000 15902000 15900000 23838000 21546000 20039000 22505000 36246000 3835 869 3456 33086;33087;33088;33089;33090;33091;33092;33093;33094;33095;33096;33097;33098;33099 26092;26093;26094;26095;26096;26097;26098;26099;26100;26101;26102;26103;26104;26105 26092 14 APGEAQFIPNK Unmodified 1170.6033 0.60332266 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 1 1 6 2 1 1 1 1 1 1 48.446 47.136 2 5.9212E-23 57578 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 190.02 158.59 171080000 0 95597000 0 9522900 11286000 0 0 13374000 7861900 0 0 17853000 0 15584000 0 3836 5189 3457 33100;33101;33102;33103;33104;33105;33106;33107 26106;26107;26108;26109;26110;26111;26112 26107 5 APGEQTVPALNLQNAFR Unmodified 1824.9482 0.94824579 5231 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 83.779 83.843 2;3 9.363E-96 96725 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 188.06 166.01 298540000 0 0 0 7436200 12865000 25514000 21841000 28344000 17642000 40663000 25437000 30127000 18881000 21396000 48396000 3837 5231 3458 33108;33109;33110;33111;33112;33113;33114;33115;33116;33117;33118;33119;33120;33121;33122;33123;33124;33125;33126;33127;33128;33129;33130;33131 26113;26114;26115;26116;26117;26118;26119;26120;26121;26122;26123;26124;26125;26126;26127;26128;26129;26130;26131;26132 26118 16 APGESPCPVGEPPLALENAASLK Unmodified 2303.1467 0.14674718 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 82.326 82.514 3 0.00014014 95584 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 39.647 31.935 18292000 0 0 0 0 0 0 1356800 0 2957000 0 4300900 0 0 0 9677800 3838 645 3459 33132;33133;33134;33135 26133;26134 26134 2 APGETALIDR Unmodified 1041.5455 0.54547343 5004 Q9ULT8 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 40.849 41.004 2 0.0053332 44552 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.375 24.414 62094000 0 0 0 0 6069100 8963500 0 0 6014500 11216000 0 0 14133000 0 15697000 3839 5004 3460 33136;33137;33138;33139;33140;33141 26135;26136;26137;26138 26136 4 APGFAQMLK Oxidation (M) 977.50044 0.50043749 1641 P50990 CCT8 T-complex protein 1 subunit theta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.18 3.29 3 1 13 1 2 1 1 1 1 1 1 1 2 1 1 1 1 1 44.077 42.805 2 0.002243 48709 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 94.006 67.21 2068600000 290960000 333380000 88081000 98282000 68478000 128740000 107270000 85516000 81079000 145280000 174380000 161790000 0 115380000 189990000 3840 1641 3461 33142;33143;33144;33145;33146;33147;33148;33149;33150;33151;33152;33153;33154;33155;33156;33157;33158 26139;26140;26141;26142;26143;26144;26145;26146;26147;26148;26149;26150;26151;26152;26153;26154;26155;26156;26157;26158;26159;26160 26158 2630 21 APGFAQMLK Unmodified 961.50552 0.50552287 1641 P50990 CCT8 T-complex protein 1 subunit theta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.45 3.89 4 1 6 1 3 1 1 1 1 1 1 1 70.997 67.508 2 0.002091 83467 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 117.93 82.054 1864900000 1087500000 365210000 82405000 0 0 165480000 0 0 0 0 0 0 0 164290000 0 3841 1641 3461 33159;33160;33161;33162;33163;33164;33165;33166;33167;33168;33169 26161;26162;26163;26164;26165;26166;26167;26168;26169;26170;26171;26172 26168 11 APGFEREDQVGAEYLK Unmodified 1807.8741 0.87407779 4281 Q9C0B0 UNK RING finger protein unkempt homolog yes yes 0 0 1 By MS/MS 2 0 1 1 65.023 61.267 3 0.038511 76156 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 30.332 23.499 9483900 0 0 9483900 0 0 0 0 0 0 0 0 0 0 0 0 3842 4281 3462 33170 26173;26174 26173 2 APGFGDNR Unmodified 832.38277 0.3827652 930 P10809 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 16.921 17.119 2 0.048531 17437 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 47.443 32.507 61325000 0 0 0 3166100 4710600 3947400 0 3456300 3225700 5804800 6387400 9474700 7788000 6264100 7099600 3843 930 3463 33171;33172;33173;33174;33175;33176;33177;33178;33179;33180;33181 26175;26176 26175 2 APGFGDNRK Unmodified 960.47773 0.47772821 930 P10809 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10.601 10.266 2 0.014964 9039 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 105.14 86.811 861690000 353130000 0 18481000 16579000 25586000 35929000 60634000 36199000 35927000 26710000 25156000 54843000 52554000 47842000 72120000 3844 930 3464 33182;33183;33184;33185;33186;33187;33188;33189;33190;33191;33192;33193;33194;33195 26177;26178;26179;26180;26181;26182;26183 26178 2 APGFLQPPPLRQPR Unmodified 1572.8889 0.88888041 4314 Q9H074 PAIP1 Polyadenylate-binding protein-interacting protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 71.142 71.224 3 0.0011645 81857 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 43.382 38.501 90320000 0 0 0 5037800 2639500 0 5067900 5229100 7160200 6802600 7305600 14407000 5448000 6038500 25183000 3845 4314 3465 33196;33197;33198;33199;33200;33201;33202;33203;33204;33205;33206 26184;26185;26186;26187;26188;26189;26190;26191;26192 26184 6 APGFRPPLQR Unmodified 1137.6407 0.64071122 472 O75179 ANKRD17 Ankyrin repeat domain-containing protein 17 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 45.519 45.607 3 0.044155 51063 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 35.511 22.555 54885000 0 0 0 5386500 2795800 4926900 6701900 6016200 3932600 0 7476000 10424000 0 7224500 0 3846 472 3466 33207;33208;33209;33210;33211;33212;33213;33214;33215 26193 26193 1 APGGFMSNR Unmodified 935.42834 0.42833518 3907 Q96KG9 SCYL1 N-terminal kinase-like protein yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 29.702 29.917 2 0.014773 32350 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 57.96 47.087 53173000 0 0 0 4663700 4003700 0 5255700 5257000 3448100 0 5603200 5074700 5648400 6055000 8163700 3847 3907 3467 33216;33217;33218;33219;33220;33221;33222;33223;33224;33225 26194 26194 1 APGGLSLHDYK Unmodified 1156.5877 0.58767259 1052 P17275 JUNB Transcription factor jun-B yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 2 40.222 40.491 2;3 0.012889 45207 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 47.097 29.732 50582000 0 0 0 9970300 0 8044800 2813600 0 0 0 1224000 0 4115200 0 24414000 3848 1052 3468 33226;33227;33228;33229;33230;33231;33232 26195;26196 26196 2 APGIDDIK Unmodified 827.43888 0.43888309 4393 Q9H4A3 WNK1 Serine/threonine-protein kinase WNK1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 36.467 36.65 2 0.012186 39112 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.213 41.662 819240000 0 0 0 47632000 47861000 61884000 60758000 80836000 53587000 0 72722000 108740000 103640000 76850000 104730000 3849 4393 3469 33233;33234;33235;33236;33237;33238;33239;33240;33241;33242;33243 26197;26198;26199;26200 26197 4 APGIPSGMETLK Unmodified 1199.622 0.62200919 1617 P50225 SULT1A1 Sulfotransferase 1A1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 62.416 62.563 2 0.0094514 70783 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.706 38.289 48036000 0 0 0 2316200 0 6941800 3245300 0 0 5821200 4715700 5390700 4653900 4716100 10235000 3850 1617 3470 33244;33245;33246;33247;33248;33249;33250;33251;33252 26201;26202 26202 2 APGLGAFR Unmodified 787.43407 0.43407249 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 2 1 47.301 47.574 2 0.0083495 53341 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 86.512 72.099 498940000 0 0 0 0 0 0 50704000 0 42861000 82452000 0 0 95105000 85834000 141980000 3851 1986 3471 33253;33254;33255;33256;33257;33258;33259 26203;26204;26205 26203 3 APGMEGTAALHGDSPARPQQAK Unmodified 2189.0647 0.064748882 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 5.2 3.92 3 2 2 1 1 1 39.837 36.605 3;4 2.2892E-12 50653 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.816 89.562 131500000 91243000 0 10720000 0 0 0 0 0 0 0 0 0 0 8238000 21296000 3852 645 3472 33260;33261;33262;33263;33264 26206;26207;26208;26209;26210;26211 26209 6 APGMEGTAALHGDSPARPQQAK Oxidation (M) 2205.0597 0.059663504 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 1 1 By MS/MS By MS/MS 2 0 3 2 1 33.028 28.295 3;4 5.7482E-08 39703 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.834 52.091 28053000 12063000 0 15990000 0 0 0 0 0 0 0 0 0 0 0 0 3853 645 3472 33265;33266;33267 26212;26213;26214 26213 784 3 APGMEPTMK Unmodified 960.44087 0.4408737 4779 Q9NZN8 CNOT2 CCR4-NOT transcription complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 28.388 28.506 2 0.0052193 30609 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 79.906 63.753 49191000 0 0 0 3737900 3219300 3481000 3803500 4856300 3000200 7181400 0 8339100 6087500 5485100 0 3854 4779 3473 33268;33269;33270;33271;33272;33273;33274;33275;33276;33277 26215;26216;26217;26218;26219;26220;26221;26222 26220 8 APGMEPTMK 2 Oxidation (M) 992.4307 0.43070295 4779 Q9NZN8 CNOT2 CCR4-NOT transcription complex subunit 2 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 6.8956 7.0939 2 0.0066907 4930 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 52.937 36.161 14823000 0 0 0 0 0 0 3029900 0 0 4151500 0 0 0 3913300 3728200 3855 4779 3473 33278;33279;33280;33281 26223;26224;26225 26223 6145;6146 3 APGMNSLEQGMVGLK Oxidation (M) 1546.7483 0.74834869 4251 Q9BYJ9 YTHDF1 YTH domain-containing family protein 1 yes yes 0 1 0 By MS/MS 2 0 1 1 66.79 60.873 2 0.00064467 77898 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.912 68.222 22105000 0 22105000 0 0 0 0 0 0 0 0 0 0 0 0 0 3856 4251 3474 33282 26226 26226 5717 1 APGMNSLEQGMVGLK Unmodified 1530.7534 0.75343407 4251 Q9BYJ9 YTHDF1 YTH domain-containing family protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 80.537 75.825 2 7.0399E-45 94404 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 197.07 171.06 65465000 0 65465000 0 0 0 0 0 0 0 0 0 0 0 0 0 3857 4251 3474 33283 26227 26227 1 APGMNTIDQGMAALK Unmodified 1516.7378 0.737784 5227 Q9Y5A9 YTHDF2 YTH domain-containing family protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 75.089 75.247 2 1.6253E-49 86859 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 168.82 139.05 147980000 0 0 0 0 0 5868200 0 11267000 6973900 19060000 22412000 10469000 7661600 16511000 47754000 3858 5227 3475 33284;33285;33286;33287;33288;33289;33290;33291;33292;33293 26228;26229;26230;26231;26232;26233;26234;26235 26232 8 APGMNTIDQGMAALK 2 Oxidation (M) 1548.7276 0.72761325 5227 Q9Y5A9 YTHDF2 YTH domain-containing family protein 2 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.55 1 1 4 2 1 1 1 1 44.31 43.316 2 0.00062944 49224 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 49.5 33.929 20996000 0 2855100 0 0 3400000 0 5284300 3711400 0 5745200 0 0 0 0 0 3859 5227 3475 33294;33295;33296;33297;33298;33299 26236;26237;26238;26239;26240 26240 6629;6630 5 APGMNTIDQGMAALK Oxidation (M) 1532.7327 0.73269863 5227 Q9Y5A9 YTHDF2 YTH domain-containing family protein 2 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.03 2.47 1 3 26 4 1 3 2 3 3 3 3 1 3 2 2 62.2 61.727 2 1.5023E-14 73481 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 101.39 85.169 189050000 0 28345000 0 3671200 8339300 0 11012000 8241700 15233000 28667000 22411000 10536000 9083600 17576000 25935000 3860 5227 3475 33300;33301;33302;33303;33304;33305;33306;33307;33308;33309;33310;33311;33312;33313;33314;33315;33316;33317;33318;33319;33320;33321;33322;33323;33324;33325;33326;33327;33328;33329 26241;26242;26243;26244;26245;26246;26247;26248;26249;26250;26251;26252;26253;26254;26255;26256;26257;26258;26259;26260;26261 26251 6629;6630 18 APGPLAAAVPADK Unmodified 1176.6503 0.65027285 504 O75474;Q92837 FRAT2;FRAT1 GSK-3-binding protein FRAT2;Proto-oncogene FRAT1 yes no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 52.878 53.016 2 0.0012179 59882 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 80.24 67.712 161760000 0 0 0 9294600 8695800 12442000 12879000 0 0 15170000 27871000 21757000 22867000 15787000 14993000 3861 504 3476 33330;33331;33332;33333;33334;33335;33336;33337;33338;33339 26262;26263;26264;26265;26266;26267 26265 6 APGPWDPLASAAGLK Unmodified 1449.7616 0.76161421 474 O75190 DNAJB6 DnaJ homolog subfamily B member 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 85.416 85.552 2 8.7347E-06 99219 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 98.353 77.483 31911000 0 0 0 0 0 2820000 0 3795100 2618300 7190900 5529600 5920200 4037100 0 0 3862 474 3477 33340;33341;33342;33343;33344;33345;33346;33347 26268;26269;26270;26271;26272;26273;26274;26275;26276 26269 8 APGQHGGFVVTVK Unmodified 1295.6986 0.69862003 4800 Q9P0W2 HMG20B SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 45.837 44.233 3 0.020857 63034 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 37.013 37.013 98585000 43559000 0 0 0 6018200 0 12464000 0 21030000 0 0 0 15514000 0 0 3863 4800 3478 33348;33349;33350;33351;33352;33353 26277;26278;26279 26279 2 APGQLALFSVSDK Unmodified 1331.7085 0.70851601 1307 P31939 ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.2 3.82 3 2 5 2 1 2 1 1 1 1 1 80.374 78.443 2 6.0485E-21 95843 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 168.22 143.44 861330000 505320000 152450000 61245000 0 0 0 2904100 0 0 0 29900000 19577000 0 15470000 74456000 3864 1307 3479 33354;33355;33356;33357;33358;33359;33360;33361;33362;33363 26280;26281;26282;26283;26284;26285;26286;26287;26288 26286 8 APGQLECETAIAALNSCLR Unmodified 2072.9983 0.9983088 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS 10 0 1 1 84.574 84.753 3 0.0048953 97972 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.353 23.411 9955600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9955600 3865 5187 3480 33364 26289 26289 1 APGSAGHYELPWVEK Unmodified 1639.7995 0.79945628 1348 P35250 RFC2 Replication factor C subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73.718 72.632 3 0.00033169 89895 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 70.281 43.311 804990000 318730000 6474200 27678000 23031000 18653000 44512000 23666000 54799000 32619000 35049000 34877000 52941000 39948000 37657000 54362000 3866 1348 3481 33365;33366;33367;33368;33369;33370;33371;33372;33373;33374;33375;33376;33377;33378;33379;33380 26290;26291;26292;26293;26294;26295;26296;26297;26298;26299;26300;26301;26302 26299 12 APGSGLALLPLK Unmodified 1135.6965 0.69649476 1802 P58107 EPPK1 Epiplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 83.149 83.213 2 6.5967E-08 96417 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 118.18 87.923 103940000 0 0 0 8043500 5406000 6171000 4868800 8577300 3670900 7297100 10739000 17659000 5877800 9403000 16226000 3867 1802 3482 33381;33382;33383;33384;33385;33386;33387;33388;33389;33390;33391;33392 26303;26304;26305;26306;26307;26308;26309;26310;26311;26312;26313;26314 26312 12 APGSTSNLAR Unmodified 972.49886 0.49885759 4755 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 yes yes 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.996 14.159 2 0.016128 13358 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 49.715 10.923 43149000 0 0 0 1905600 2990800 3181400 3510900 1894700 2247000 3899000 4275200 6413000 4523700 3798000 4509400 3868 4755 3483 33393;33394;33395;33396;33397;33398;33399;33400;33401;33402;33403;33404 26315;26316;26317 26317 2 APGTNVAMASNQAVR Oxidation (M) 1501.7307 0.73072479 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 29.364 29.53 2 2.2639E-27 30801 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 134.98 107.86 99877000 0 0 0 5484800 5309200 6501900 9698400 7256600 5353800 11017000 0 13247000 13562000 9537900 12909000 3869 1601 3484 33405;33406;33407;33408;33409;33410;33411;33412;33413;33414;33415 26318;26319;26320;26321;26322;26323;26324;26325;26326;26327;26328;26329 26325 2578 12 APGTNVAMASNQAVR Unmodified 1485.7358 0.73581017 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 38.283 38.603 2 1.1378E-26 42996 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 149.49 138.97 83843000 0 0 0 0 0 11591000 6338100 7851700 0 10107000 0 15811000 9536900 0 22608000 3870 1601 3484 33416;33417;33418;33419;33420;33421;33422;33423;33424;33425;33426 26330;26331;26332;26333;26334;26335;26336;26337;26338;26339;26340 26330 11 APGVPRETEEEK Unmodified 1340.6572 0.65720872 1522 P47712 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.17 3.33 6 1 23 2 3 2 2 2 2 2 2 2 2 2 2 2 2 1 19.371 18.606 2;3 0.0028772 18243 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 46.216 30.079 604410000 50883000 89084000 191180000 13281000 16055000 24173000 20505000 19905000 20152000 25704000 21896000 29833000 21054000 15099000 45610000 3871 1522 3485 33427;33428;33429;33430;33431;33432;33433;33434;33435;33436;33437;33438;33439;33440;33441;33442;33443;33444;33445;33446;33447;33448;33449;33450;33451;33452;33453;33454;33455;33456 26341;26342;26343;26344;26345;26346;26347;26348;26349;26350;26351;26352;26353;26354;26355;26356;26357;26358 26352 8 APGYPSSPVTTASGTTLR Unmodified 1761.8897 0.88972785 4517 Q9HCK8 CHD8 Chromodomain-helicase-DNA-binding protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.643 58.758 2 6.6623E-11 66156 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.902 92.661 112720000 0 0 0 6634200 7157800 7056100 9003000 6730200 4682700 11268000 12106000 11567000 12848000 8457200 15208000 3872 4517 3486 33457;33458;33459;33460;33461;33462;33463;33464;33465;33466;33467;33468 26359;26360;26361;26362;26363;26364;26365;26366;26367;26368 26362 10 APHAMISSCGTIPGNPYPK Unmodified 1996.9499 0.94990205 3198 Q86XN7 PROSER1 Proline and serine-rich protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 58.933 59.316 3 0.042509 67500 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 27.714 20.203 17735000 0 0 0 0 0 0 0 5046500 0 0 6639600 0 0 0 6048400 3873 3198 3487 33469;33470;33471 26369;26370 26370 1 APHDFQFVQK Unmodified 1215.6037 0.60365701 3136 Q86TI2 DPP9 Dipeptidyl peptidase 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 51.434 45.53 3 0.00022617 62617 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 114.97 97.456 267890000 166680000 19317000 81895000 0 0 0 0 0 0 0 0 0 0 0 0 3874 3136 3488 33472;33473;33474 26371;26372;26373;26374 26373 4 APHQVPVQSEK Unmodified 1218.6357 0.63568542 602 O94913 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 2 2 2 17.098 13.678 2;3 0.0017044 19958 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 59.418 38.117 103090000 64563000 21781000 16749000 0 0 0 0 0 0 0 0 0 0 0 0 3875 602 3489 33475;33476;33477;33478;33479;33480 26375;26376;26377;26378 26377 3 APHYVLSQLTTDNK Unmodified 1585.81 0.81002097 604 O94916 NFAT5 Nuclear factor of activated T-cells 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 57.306 56.637 3 0.0062508 63437 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 28.727 11.302 76540000 19358000 0 0 3118100 0 3141200 5587100 4871200 5110100 6663400 6424300 10196000 0 0 12070000 3876 604 3490 33481;33482;33483;33484;33485;33486;33487;33488;33489;33490 26379;26380;26381;26382;26383;26384;26385;26386;26387 26387 9 APIAAPEPELK Unmodified 1134.6285 0.62847478 935 P11171 EPB41 Protein 4.1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 58.33 52.996 2 0.0034467 67950 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.749 55.495 31732000 0 31732000 0 0 0 0 0 0 0 0 0 0 0 0 0 3877 935 3491 33491;33492 26388 26388 1 APIDTPTQQLIQDIK Unmodified 1679.9094 0.90940066 4530 Q9HD67 MYO10 Unconventional myosin-X yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.08 3.33 2 1 9 2 1 1 1 1 1 1 1 1 1 1 82.754 81.759 2 1.0848E-44 101425 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 155.88 138.05 152900000 0 117270000 1227000 0 4236000 4714400 3072800 0 2810800 8983800 0 0 4307100 0 6280000 3878 4530 3492 33493;33494;33495;33496;33497;33498;33499;33500;33501;33502;33503;33504 26389;26390;26391;26392;26393;26394;26395;26396;26397;26398;26399 26392 10 APIDTSDVEEK Unmodified 1202.5667 0.56666238 2126 Q06265 EXOSC9 Exosome complex component RRP45 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 31.496 32.049 2 0.00084329 34809 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 76.85 63.873 41223000 0 0 0 0 0 0 0 0 0 0 7456200 13526000 0 6716700 13524000 3879 2126 3493 33505;33506;33507;33508;33509;33510 26400;26401;26402;26403;26404;26405 26402 6 APIEDLDLEGQK Unmodified 1326.6667 0.66671078 566 O75962 TRIO Triple functional domain protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.684 61.784 2 0.00074676 70611 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 92.538 83.181 75199000 0 0 0 3413000 3871700 6465600 4042600 4408200 3888700 7048100 7588500 11697000 6912100 6956600 8906900 3880 566 3494 33511;33512;33513;33514;33515;33516;33517;33518;33519;33520;33521;33522 26406;26407;26408;26409;26410;26411;26412;26413;26414;26415 26406 9 APIFTSEQGEK Unmodified 1205.5928 0.59281755 1035 P16333 NCK1 Cytoplasmic protein NCK1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 37.411 36.294 2 1.9356E-05 40325 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 126.07 102.04 411150000 7425300 295650000 3146000 6540500 5553100 8551000 6373600 4917600 4992000 8978600 11092000 13505000 8469200 9523500 16435000 3881 1035 3495 33523;33524;33525;33526;33527;33528;33529;33530;33531;33532;33533;33534;33535;33536;33537;33538 26416;26417;26418;26419;26420;26421;26422;26423;26424;26425;26426;26427;26428;26429 26426 14 APIIAVTR Unmodified 839.52289 0.52288749 1000 P14618 PKM Pyruvate kinase PKM yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.018 45.189 2 0.011799 51285 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 113.89 71.116 6483200000 0 0 0 372170000 328990000 429840000 504850000 487650000 387080000 431110000 862430000 895210000 110060000 403460000 1270400000 3882 1000 3496 33539;33540;33541;33542;33543;33544;33545;33546;33547;33548;33549;33550 26430;26431;26432;26433;26434;26435;26436;26437;26438;26439 26430 0 APIIAVTRNPQTAR Unmodified 1506.8631 0.86305959 1000 P14618 PKM Pyruvate kinase PKM yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 43.782 43.941 3 4.8013E-20 49298 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 119.01 92.891 586710000 0 0 0 36858000 27392000 25071000 52677000 47885000 60906000 36152000 68238000 70630000 0 40487000 120410000 3883 1000 3497 33551;33552;33553;33554;33555;33556;33557;33558;33559;33560;33561 26440;26441;26442;26443;26444;26445;26446;26447;26448;26449;26450;26451;26452;26453;26454;26455;26456 26444 16 APIIPHSGSIEK Unmodified 1247.6874 0.68738664 3935 Q96NB3 ZNF830 Zinc finger protein 830 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 2 2 2 46.477 40.999 2;3 0.00064933 57344 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.665 81.003 431470000 279060000 62167000 90243000 0 0 0 0 0 0 0 0 0 0 0 0 3884 3935 3498 33562;33563;33564;33565;33566;33567 26457;26458;26459;26460;26461;26462 26461 4 APILIATDVASR Unmodified 1225.703 0.7030367 1062;3670 P17844;Q92841 DDX5;DDX17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 70.447 70.237 2 0.0001003 80928 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 105.4 85.61 3061300000 0 18313000 0 145220000 163710000 212590000 249820000 199880000 203530000 295140000 296850000 362950000 277150000 238080000 398020000 3885 1062;3670 3499 33568;33569;33570;33571;33572;33573;33574;33575;33576;33577;33578;33579;33580 26463;26464;26465;26466;26467;26468;26469;26470;26471;26472;26473;26474;26475;26476;26477;26478;26479;26480;26481;26482;26483;26484;26485;26486;26487 26486 25 APILIATDVASRGLDVEDVK Unmodified 2081.1368 0.13683442 1062;3670 P17844;Q92841 DDX5;DDX17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 no no 0 0 1 By MS/MS By MS/MS By MS/MS 2.11 0.567 1 6 2 5 2 2 90.653 87.211 2;3 1.0394E-72 105926 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 185.67 171.64 658870000 393950000 139630000 125280000 0 0 0 0 0 0 0 0 0 0 0 0 3886 1062;3670 3500 33581;33582;33583;33584;33585;33586;33587;33588;33589 26488;26489;26490;26491;26492;26493;26494;26495;26496;26497;26498 26495 10 APIPCEVVK Unmodified 1011.5423 0.54230231 2852 Q68CP9 ARID2 AT-rich interactive domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.4 46.567 2 0.0091747 52275 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 67.494 48.718 166570000 0 0 0 8579200 10192000 12051000 11759000 9427000 7950600 18116000 14543000 24107000 16802000 13141000 19903000 3887 2852 3501 33590;33591;33592;33593;33594;33595;33596;33597;33598;33599;33600;33601 26499;26500;26501;26502;26503;26504;26505 26504 7 APIQTYVLGANNQETVK Unmodified 1844.9632 0.96322715 2862 Q69YN2 CWF19L1 CWF19-like protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 73.637 69.085 2 8.998E-58 87062 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 194.12 187.11 50477000 0 50477000 0 0 0 0 0 0 0 0 0 0 0 0 0 3888 2862 3502 33602;33603 26506;26507 26506 2 APIQWEER Unmodified 1027.5087 0.50869399 1615 P50213 IDH3A Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 43.671 44.105 2 0.039356 49468 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 50.703 4.6877 69410000 0 0 0 0 0 0 0 9979500 0 11533000 0 17127000 14794000 0 15976000 3889 1615 3503 33604;33605;33606;33607;33608 26508;26509;26510;26511 26510 4 APIQWEERNVTAIQGPGGK Unmodified 2050.0596 0.059587149 1615 P50213 IDH3A Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial yes yes 0 0 1 By MS/MS 2 0 1 1 74.602 66.471 3 4.913E-05 87782 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.522 55.69 27298000 27298000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3890 1615 3504 33609 26512 26512 1 APITDIAIIIK Unmodified 1166.7275 0.72746054 2830 Q5VZ89 DENND4C DENN domain-containing protein 4C yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 86.768 86.915 2 0.010255 100495 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.715 36.678 12121000 0 0 0 0 0 0 1328200 0 0 2404900 1923200 1958100 0 1463200 3043200 3891 2830 3505 33610;33611;33612;33613;33614;33615 26513;26514;26515;26516;26517 26514 5 APIVTVGVNNDPADVR Unmodified 1635.858 0.8580338 4079 Q9BPX3 NCAPG Condensin complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 65.504 65.658 2 1.8519E-20 74443 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 142.08 126.82 63337000 0 0 0 0 3381300 7006300 3752200 0 0 6512500 8756200 8994400 5008000 8604600 11321000 3892 4079 3506 33616;33617;33618;33619;33620;33621;33622;33623;33624 26518;26519;26520;26521;26522;26523;26524;26525;26526 26522 8 APKPDGPGGGPGGSHMGGNYGDDR Unmodified 2251.9665 0.9664914 1363 P35637 FUS RNA-binding protein FUS yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 26.365 26.564 3;4 9.7556E-43 28539 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 121.47 120.17 1760500000 0 0 0 83618000 84637000 152970000 119990000 109490000 65851000 171320000 203050000 251890000 169810000 146720000 201140000 3893 1363 3507 33625;33626;33627;33628;33629;33630;33631;33632;33633;33634;33635;33636;33637;33638;33639;33640;33641;33642;33643;33644;33645;33646;33647;33648 26527;26528;26529;26530;26531;26532;26533;26534;26535;26536;26537 26536 7 APKPDGPGGGPGGSHMGGNYGDDR Oxidation (M) 2267.9614 0.96140602 1363 P35637 FUS RNA-binding protein FUS yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 18.439 18.51 4 2.268E-14 18923 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 71.118 71.118 288630000 0 0 0 53384000 0 54481000 49495000 0 42674000 86937000 0 0 1656400 0 0 3894 1363 3507 33649;33650;33651;33652;33653;33654 26538;26539;26540;26541 26539 2108 1 APKPEDIDEEDDDVPDLVENFDEASK Unmodified 2930.2829 0.28290212 3900 Q96K17 BTF3L4 Transcription factor BTF3 homolog 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.33 0.471 2 1 1 1 1 86.114 82.496 3 0.00084164 102347 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 36.767 33.897 132410000 3475800 86331000 42603000 0 0 0 0 0 0 0 0 0 0 0 0 3895 3900 3508 33655;33656;33657 26542;26543 26542 2 APLATGEDDDDEVPDLVENFDEASK Unmodified 2690.1719 0.17189511 1102 P20290 BTF3 Transcription factor BTF3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.57 3.95 2 8 3 17 6 6 1 2 1 1 2 2 2 2 1 2 2 89.3 87.443 2;3 2.1852E-119 106738 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 205.68 205.68 1719200000 338430000 1269700000 4675500 0 10645000 7156600 0 6903000 6958800 9839800 15743000 16257000 0 6390200 26510000 3896 1102 3509 33658;33659;33660;33661;33662;33663;33664;33665;33666;33667;33668;33669;33670;33671;33672;33673;33674;33675;33676;33677;33678;33679;33680;33681;33682;33683;33684;33685;33686;33687 26544;26545;26546;26547;26548;26549;26550;26551;26552;26553;26554;26555;26556;26557;26558;26559;26560;26561;26562;26563;26564;26565;26566;26567;26568;26569;26570;26571;26572;26573;26574;26575;26576;26577;26578;26579 26551 36 APLCGEGDQPGGFESQEK Unmodified 1904.8211 0.82105594 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 45.955 45.025 2 9.8059E-81 56282 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 188.4 169.59 81252000 0 42149000 0 0 2168100 0 0 0 3156200 0 6464100 5739900 6661600 3628300 11285000 3897 645 3510 33688;33689;33690;33691;33692;33693;33694;33695;33696;33697 26580;26581;26582;26583;26584;26585 26581 6 APLDIPIPDPPPK Unmodified 1368.7653 0.76530261 4987 Q9UL46 PSME2 Proteasome activator complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.719 81.78 2 0.025208 94514 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 47.302 36.544 98521000 0 0 0 2484600 2436300 16586000 5603900 3379800 5778500 7761900 11555000 8879900 3824900 8336400 21893000 3898 4987 3511 33698;33699;33700;33701;33702;33703;33704;33705;33706;33707;33708;33709 26586;26587 26586 2 APLDIPIPDPPPKDDEMETDK Unmodified 2332.1144 0.114444 4987 Q9UL46 PSME2 Proteasome activator complex subunit 2 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 79.386 79.531 3 0.00025262 91294 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 45.047 41.443 79731000 0 0 0 0 0 11431000 0 4805800 3742400 8188000 10043000 0 0 8229100 33292000 3899 4987 3512 33710;33711;33712;33713;33714;33715;33716 26588;26589;26590;26591;26592;26593;26594 26594 7 APLDIPIPDPPPKDDEMETDK Oxidation (M) 2348.1094 0.10935862 4987 Q9UL46 PSME2 Proteasome activator complex subunit 2 yes yes 0 1 1 By MS/MS 10 0 1 1 76.72 77.006 3 0.00028806 88253 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.615 38.562 39457000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39457000 3900 4987 3512 33717 26595 26595 6333 1 APLDIPVPDPVK Unmodified 1259.7125 0.71253876 2127 Q06323 PSME1 Proteasome activator complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.71 3.81 6 3 12 2 6 1 1 1 1 1 1 1 1 1 1 1 1 1 83.53 82.054 2 1.964E-06 102870 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 133.81 102.73 11287000000 125050000 10022000000 69102000 31977000 29691000 79210000 56456000 42035000 35030000 92297000 123540000 118980000 50173000 134430000 277260000 3901 2127 3513 33718;33719;33720;33721;33722;33723;33724;33725;33726;33727;33728;33729;33730;33731;33732;33733;33734;33735;33736;33737;33738 26596;26597;26598;26599;26600;26601;26602;26603;26604;26605;26606;26607;26608;26609;26610;26611;26612;26613;26614;26615;26616;26617 26609 22 APLEVAQEH Unmodified 992.49271 0.49270958 599 O94903 PROSC Proline synthase co-transcribed bacterial homolog protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.12 3.72 2 1 5 2 1 1 1 1 1 1 31.152 29.541 2 0.010636 37814 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.02 116.2 290920000 0 265990000 1406600 0 2288400 0 0 0 0 0 6017200 0 0 4968200 10250000 3902 599 3514 33739;33740;33741;33742;33743;33744;33745;33746 26618;26619;26620;26621 26618 2 APLGAGVIER Unmodified 981.56073 0.56072956 3223 Q8IV50 LYSMD2 LysM and putative peptidoglycan-binding domain-containing protein 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 48.924 48.989 2 0.010972 55095 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 55.064 23.76 75375000 0 0 0 6493000 6706300 0 6393000 6257900 0 11321000 0 0 14150000 7439600 16613000 3903 3223 3515 33747;33748;33749;33750;33751;33752;33753;33754;33755 26622;26623;26624;26625;26626 26623 5 APLGGIHISETK Unmodified 1221.6717 0.67173657 2435 Q14689 DIP2A Disco-interacting protein 2 homolog A yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 54.977 48.926 3 0.0030735 67184 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.966 47.024 68574000 49900000 0 18674000 0 0 0 0 0 0 0 0 0 0 0 0 3904 2435 3516 33756;33757 26627;26628;26629;26630 26629 3 APLKPYPVSPSDK Unmodified 1397.7555 0.7554662 1441 P41252 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 6 2 22 3 3 2 2 2 1 2 2 1 2 2 2 2 2 2 40.58 39.269 2;3 2.2971E-09 54771 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 117.86 106.27 1233500000 422340000 129430000 41072000 28414000 41525000 17140000 45409000 47940000 18722000 65723000 81430000 68894000 46962000 66732000 111810000 3905 1441 3517 33758;33759;33760;33761;33762;33763;33764;33765;33766;33767;33768;33769;33770;33771;33772;33773;33774;33775;33776;33777;33778;33779;33780;33781;33782;33783;33784;33785;33786;33787 26631;26632;26633;26634;26635;26636;26637;26638;26639;26640;26641;26642;26643;26644;26645;26646;26647;26648;26649;26650;26651;26652;26653;26654;26655;26656;26657;26658;26659;26660;26661;26662;26663;26664;26665 26652 34 APLLASDSSSSGGSHSEDGDQK Unmodified 2130.9301 0.9301487 469 O75170 PPP6R2 Serine/threonine-protein phosphatase 6 regulatory subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.13 1 1 7 2 1 1 1 1 1 2 26.017 24.94 3 6.3511E-106 32198 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 174.2 166.88 41030000 0 23396000 0 0 0 4203900 3159800 0 2487700 0 0 0 0 2811400 4970500 3906 469 3518 33788;33789;33790;33791;33792;33793;33794;33795;33796 26666;26667;26668;26669;26670;26671;26672;26673;26674;26675 26670 9 APLNETGEVVNEK Unmodified 1398.6991 0.69907354 2310 Q13535 ATR Serine/threonine-protein kinase ATR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 39.538 38.986 2 2.1397E-36 48764 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 217.14 183.76 100730000 0 21086000 0 5016100 4487000 5573000 5394300 5803900 4708000 8797600 7214500 8186000 7871300 5957200 10639000 3907 2310 3519 33797;33798;33799;33800;33801;33802;33803;33804;33805;33806;33807;33808;33809;33810 26676;26677;26678;26679;26680;26681;26682;26683;26684;26685 26678 9 APLNIPGTPVLEDFPQNDDEK Unmodified 2308.1223 0.12230657 2467 Q15003 NCAPH Condensin complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.14 3.31 5 2 22 1 4 2 2 2 2 2 2 2 2 2 2 2 2 88.258 87.33 2;3 1.3259E-17 104213 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 118.51 106.36 917750000 41636000 715590000 7490300 0 7496800 11365000 7265600 10629000 9308600 21157000 13840000 16520000 7438800 10814000 37192000 3908 2467 3520 33811;33812;33813;33814;33815;33816;33817;33818;33819;33820;33821;33822;33823;33824;33825;33826;33827;33828;33829;33830;33831;33832;33833;33834;33835;33836;33837;33838;33839 26686;26687;26688;26689;26690;26691;26692;26693;26694;26695;26696;26697;26698;26699;26700;26701;26702;26703;26704;26705 26694 20 APLNVQFNSPLPGDAVK Unmodified 1765.9363 0.93628412 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.12 2.39 1 2 22 3 1 2 2 2 2 2 2 2 2 1 2 2 81.676 81.296 2;3 1.9762E-127 94227 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 258.78 243.91 517170000 0 229340000 0 8270400 9953800 27523000 14419000 16762000 11015000 31533000 36222000 33815000 10239000 24165000 63914000 3909 487 3521 33840;33841;33842;33843;33844;33845;33846;33847;33848;33849;33850;33851;33852;33853;33854;33855;33856;33857;33858;33859;33860;33861;33862;33863;33864 26706;26707;26708;26709;26710;26711;26712;26713;26714;26715;26716;26717;26718;26719;26720;26721;26722 26715 16 APLPDLYPFGTMR Oxidation (M) 1492.7384 0.73843593 3670 Q92841 DDX17 Probable ATP-dependent RNA helicase DDX17 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 84.793 84.858 2 0.0014962 98371 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 59.426 49.054 264980000 0 0 0 9780800 17182000 20650000 15994000 19579000 17880000 29949000 20398000 32562000 23815000 22606000 34587000 3910 3670 3522 33865;33866;33867;33868;33869;33870;33871;33872;33873;33874;33875;33876 26723;26724;26725;26726;26727;26728;26729;26730;26731;26732;26733;26734;26735 26733 5203 10 APLPDLYPFGTMR Unmodified 1476.7435 0.74352131 3670 Q92841 DDX17 Probable ATP-dependent RNA helicase DDX17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 2 2 1 1 1 1 88.774 88.885 2 0.0019237 103252 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 59.426 27.418 34880000 0 0 0 0 1109600 1398300 0 2433400 1009500 5780700 5172300 2245300 1241300 2866100 11623000 3911 3670 3522 33877;33878;33879;33880;33881;33882;33883;33884;33885;33886;33887;33888 26736;26737;26738;26739;26740;26741;26742 26738 5 APLPLGHIK Unmodified 944.58074 0.58073672 896 P09960 LTA4H Leukotriene A-4 hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 46.767 47.238 2 0.012776 52495 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 60.799 35.8 25202000 0 0 0 0 0 0 0 0 0 0 5057200 0 0 3711300 16434000 3912 896 3523 33889;33890;33891 26743;26744 26744 2 APLQGDHNHLFIR Unmodified 1516.7899 0.78989465 3560 Q8WVC0 LEO1 RNA polymerase-associated protein LEO1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 2 2 2 2 2 2 2 2 2 1 48.764 48.985 3;4 2.4427E-09 55085 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 113.24 74.234 677850000 0 0 0 8994200 0 120050000 12166000 49777000 85938000 31219000 55107000 49468000 156070000 48307000 60750000 3913 3560 3524 33892;33893;33894;33895;33896;33897;33898;33899;33900;33901;33902;33903;33904;33905;33906;33907;33908;33909;33910;33911 26745;26746;26747;26748;26749;26750;26751;26752;26753;26754;26755;26756;26757 26750 12 APLQQCAEDR Unmodified 1186.5401 0.54007047 2467 Q15003 NCAPH Condensin complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 18.768 18.955 2 0.00068759 19520 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 131.06 105.5 84128000 0 0 0 4330900 3227800 9514400 5630900 5535000 5830700 8762500 9929000 10989000 0 7440700 12937000 3914 2467 3525 33912;33913;33914;33915;33916;33917;33918;33919;33920;33921;33922 26758;26759;26760;26761;26762;26763;26764;26765;26766 26758 9 APLRVQVQDNEGCPVEALVK Unmodified 2221.1525 0.15250126 1124 P21333 FLNA Filamin-A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.33 3.77 4 8 3 1 1 1 1 1 1 1 1 1 76.831 74.704 3 1.7031E-47 91476 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 131.54 122.83 1867100000 1766100000 0 44640000 0 0 0 0 3298100 4069900 6588700 8038500 6564600 2529400 6418500 18878000 3915 1124 3526 33923;33924;33925;33926;33927;33928;33929;33930;33931;33932;33933;33934 26767;26768;26769;26770;26771;26772;26773;26774 26773 8 APLSPSLNSRPSPISATPPALVPETR Unmodified 2654.4392 0.43916445 2931 Q6P3S6 FBXO42 F-box only protein 42 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 80.084 80.169 3 4.9898E-20 92491 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.693 71.189 33235000 0 0 0 0 2584900 2888300 2316000 4950200 0 4796100 4669300 0 2897100 0 8133100 3916 2931 3527 33935;33936;33937;33938;33939;33940;33941;33942;33943 26775;26776;26777;26778;26779;26780;26781;26782;26783 26778 9 APLTSGIDSSTLAPSNLK Unmodified 1770.9363 0.9363437 485 O75362 ZNF217 Zinc finger protein 217 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 74.654 74.116 2 2.4172E-204 91443 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 300.22 260.31 166200000 0 72337000 0 6108100 6020200 6297600 7921200 5295000 6286300 9008300 8889900 10735000 5258200 7972800 14067000 3917 485 3528 33944;33945;33946;33947;33948;33949;33950;33951;33952;33953;33954;33955;33956;33957 26784;26785;26786;26787;26788;26789;26790;26791;26792;26793;26794;26795;26796;26797;26798 26787 14 APLVLKD Unmodified 754.45889 0.45889025 4015 Q99497 PARK7 Protein deglycase DJ-1 yes yes 0 0 1 By matching By MS/MS By matching 2.25 0.433 3 1 1 2 1 43.901 38.734 1 0.0091919 50466 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.297 42.926 471560000 19623000 445030000 6913100 0 0 0 0 0 0 0 0 0 0 0 0 3918 4015 3529 33958;33959;33960;33961 26799;26800 26799 0 APLYDLAAHEDK Unmodified 1341.6565 0.65648044 4294 Q9GZL7 WDR12 Ribosome biogenesis protein WDR12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.71 3.81 2 1 4 2 1 1 1 1 1 53.777 51.763 3 0.0028053 64699 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 65.043 59.579 176460000 0 96505000 35074000 0 7045100 0 7438000 0 0 0 0 0 0 8464900 21936000 3919 4294 3530 33962;33963;33964;33965;33966;33967;33968 26801;26802;26803;26804;26805;26806;26807 26805 7 APNISMPDVDLNLK Oxidation (M) 1541.7759 0.77594365 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.15 2.35 1 2 23 3 2 2 2 2 2 2 2 1 2 2 2 2 74.487 74.083 2 4.9351E-44 91334 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 170.23 144.16 334170000 0 80621000 0 13134000 17691000 23065000 21691000 22608000 21301000 22784000 10430000 28775000 26828000 20155000 25086000 3920 2172 3531 33969;33970;33971;33972;33973;33974;33975;33976;33977;33978;33979;33980;33981;33982;33983;33984;33985;33986;33987;33988;33989;33990;33991;33992;33993;33994 26808;26809;26810;26811;26812;26813;26814;26815;26816;26817;26818;26819;26820;26821;26822;26823;26824;26825;26826;26827;26828 26811 3499 14 APNISMPDVDLNLK Unmodified 1525.781 0.78102903 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 84.103 83.581 2 1.0219E-11 97002 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 125.97 112.31 315140000 0 164920000 0 1107100 3871100 7016100 6869600 14999000 11301000 12923000 13181000 17559000 10731000 14390000 36273000 3921 2172 3531 33995;33996;33997;33998;33999;34000;34001;34002;34003;34004;34005;34006;34007;34008 26829;26830;26831;26832;26833;26834;26835;26836;26837;26838;26839 26838 11 APNLEPPLPEEEK Unmodified 1461.7351 0.73512469 2722 Q5D1E8 ZC3H12A Ribonuclease ZC3H12A yes yes 0 0 0 By MS/MS 10 0 1 1 64.56 65.003 2 0.029408 74307 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 63.073 52.244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3922 2722 3532 34009 26840 26840 1 APNLTAQAAPR Unmodified 1108.5989 0.59890598 3703 Q93015 NAT6 N-acetyltransferase 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.449 33.633 2 1.2731E-20 36198 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 166.07 133.92 1409100000 0 0 0 13159000 20055000 21250000 326550000 403720000 333240000 76897000 83980000 108370000 7082100 5915800 8871500 3923 3703 3533 34010;34011;34012;34013;34014;34015;34016;34017;34018;34019;34020;34021 26841;26842;26843;26844;26845;26846;26847;26848;26849;26850;26851;26852 26850 12 APNNFTIQNQYPR Unmodified 1561.7637 0.76373948 3135 Q86TG7 PEG10 Retrotransposon-derived protein PEG10 yes yes 0 0 0 By MS/MS By matching By matching By matching 10 0 4 1 1 1 1 55.628 55.578 2 0.024407 63691 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 36.525 19.893 7709100 0 0 0 0 1512800 1708100 1734600 2753600 0 0 0 0 0 0 0 3924 3135 3534 34022;34023;34024;34025 26853 26853 1 APNTPASGANGDGSMSQTQSGSTVK Oxidation (M) 2365.0452 0.045195231 75 CON__P15636 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.89 0.918 2 148 1 1 14 11 15 12 12 9 11 14 13 12 11 14 22.018 22.204 2;3 0 21445 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 398.97 378.87 + 503820000000 0 4119400 3143000 39999000000 33542000000 52369000000 31841000000 27185000000 40936000000 50162000000 50937000000 61212000000 46042000000 38352000000 31234000000 3925 75 3535 34026;34027;34028;34029;34030;34031;34032;34033;34034;34035;34036;34037;34038;34039;34040;34041;34042;34043;34044;34045;34046;34047;34048;34049;34050;34051;34052;34053;34054;34055;34056;34057;34058;34059;34060;34061;34062;34063;34064;34065;34066;34067;34068;34069;34070;34071;34072;34073;34074;34075;34076;34077;34078;34079;34080;34081;34082;34083;34084;34085;34086;34087;34088;34089;34090;34091;34092;34093;34094;34095;34096;34097;34098;34099;34100;34101;34102;34103;34104;34105;34106;34107;34108;34109;34110;34111;34112;34113;34114;34115;34116;34117;34118;34119;34120;34121;34122;34123;34124;34125;34126;34127;34128;34129;34130;34131;34132;34133;34134;34135;34136;34137;34138;34139;34140;34141;34142;34143;34144;34145;34146;34147;34148;34149;34150;34151;34152;34153;34154;34155;34156;34157;34158;34159;34160;34161;34162;34163;34164;34165;34166;34167;34168;34169;34170;34171;34172;34173;34174;34175 26854;26855;26856;26857;26858;26859;26860;26861;26862;26863;26864;26865;26866;26867;26868;26869;26870;26871;26872;26873;26874;26875;26876;26877;26878;26879;26880;26881;26882;26883;26884;26885;26886;26887;26888;26889;26890;26891;26892;26893;26894;26895;26896;26897;26898;26899;26900;26901;26902;26903;26904;26905;26906;26907;26908;26909;26910;26911;26912;26913;26914;26915;26916;26917;26918;26919;26920;26921;26922;26923;26924;26925;26926;26927;26928;26929;26930;26931;26932;26933;26934;26935;26936;26937;26938;26939;26940;26941;26942;26943;26944;26945;26946;26947;26948;26949;26950;26951;26952;26953;26954;26955;26956;26957;26958;26959;26960;26961;26962;26963;26964;26965;26966;26967;26968;26969;26970;26971;26972;26973;26974;26975;26976;26977;26978;26979;26980;26981;26982;26983;26984;26985;26986;26987;26988;26989;26990;26991;26992;26993;26994;26995 26866 106 135 APNTPASGANGDGSMSQTQSGSTVK Unmodified 2349.0503 0.050280609 75 CON__P15636 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 113 9 12 9 9 8 9 10 11 8 9 11 8 26.47 26.642 2;3 0 31400 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 353.41 322.93 + 295550000000 0 0 0 18522000000 17833000000 28636000000 14376000000 21008000000 7065100000 34511000000 32991000000 35067000000 31421000000 23735000000 30381000000 3926 75 3535 34176;34177;34178;34179;34180;34181;34182;34183;34184;34185;34186;34187;34188;34189;34190;34191;34192;34193;34194;34195;34196;34197;34198;34199;34200;34201;34202;34203;34204;34205;34206;34207;34208;34209;34210;34211;34212;34213;34214;34215;34216;34217;34218;34219;34220;34221;34222;34223;34224;34225;34226;34227;34228;34229;34230;34231;34232;34233;34234;34235;34236;34237;34238;34239;34240;34241;34242;34243;34244;34245;34246;34247;34248;34249;34250;34251;34252;34253;34254;34255;34256;34257;34258;34259;34260;34261;34262;34263;34264;34265;34266;34267;34268;34269;34270;34271;34272;34273;34274;34275;34276;34277;34278;34279;34280;34281;34282;34283;34284;34285;34286;34287;34288 26996;26997;26998;26999;27000;27001;27002;27003;27004;27005;27006;27007;27008;27009;27010;27011;27012;27013;27014;27015;27016;27017;27018;27019;27020;27021;27022;27023;27024;27025;27026;27027;27028;27029;27030;27031;27032;27033;27034;27035;27036;27037;27038;27039;27040;27041;27042;27043;27044;27045;27046;27047;27048;27049;27050;27051;27052;27053;27054;27055;27056;27057;27058;27059;27060;27061;27062;27063;27064;27065;27066;27067;27068;27069;27070;27071;27072;27073;27074;27075;27076;27077;27078;27079;27080;27081;27082;27083;27084;27085;27086;27087;27088;27089;27090;27091;27092;27093;27094;27095;27096;27097;27098;27099;27100;27101;27102;27103;27104;27105;27106;27107;27108;27109;27110;27111;27112;27113 27005 109 APNTPDILEIEFK Unmodified 1485.7715 0.7715102 737 P00966 ASS1 Argininosuccinate synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.08 3.94 1 8 3 12 5 5 2 1 1 1 1 1 1 1 1 1 1 1 1 88.563 87.218 2;3 4.5019E-20 88306 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 169.52 133.18 6423900000 1015700000 4811500000 197460000 2062000 5383000 19928000 6812500 7063500 16410000 22934000 51349000 44490000 9863400 34698000 178210000 3927 737 3536 34289;34290;34291;34292;34293;34294;34295;34296;34297;34298;34299;34300;34301;34302;34303;34304;34305;34306;34307;34308;34309;34310;34311;34312 27114;27115;27116;27117;27118;27119;27120;27121;27122;27123;27124;27125;27126;27127;27128;27129;27130;27131;27132;27133;27134;27135;27136;27137;27138 27121 23 APNTPDILEIEFKK Unmodified 1613.8665 0.86647322 737 P00966 ASS1 Argininosuccinate synthase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.16 3.86 1 15 3 12 10 6 3 1 1 1 1 1 1 1 1 1 1 1 1 82.687 80.362 2;3;4 7.8102E-30 100175 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.71 120.65 4158300000 1627400000 679240000 705540000 10651000 17428000 38075000 30297000 38004000 35281000 65248000 139920000 121760000 26845000 106310000 516310000 3928 737 3537 34313;34314;34315;34316;34317;34318;34319;34320;34321;34322;34323;34324;34325;34326;34327;34328;34329;34330;34331;34332;34333;34334;34335;34336;34337;34338;34339;34340;34341;34342;34343 27139;27140;27141;27142;27143;27144;27145;27146;27147;27148;27149;27150;27151;27152;27153;27154;27155;27156;27157;27158;27159;27160;27161;27162;27163;27164;27165;27166;27167;27168;27169;27170;27171;27172 27142 31 APNYPTEGNHR Unmodified 1254.5741 0.5741478 4306 Q9GZT8 NIF3L1 NIF3-like protein 1 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 14.418 14.568 3 0.027421 13378 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 29.341 13.801 8463900 0 0 0 3010500 0 0 0 0 0 0 0 0 0 0 5453400 3929 4306 3538 34344;34345 27173 27173 1 APNYPTEGNHRVEFNVNYTQDLDK Unmodified 2820.3103 0.31033512 4306 Q9GZT8 NIF3L1 NIF3-like protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 76.315 68.185 4 4.5145E-07 89935 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.097 52.335 19280000 19280000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3930 4306 3539 34346 27174 27174 1 APNYSCVMTGSWDK Unmodified 1614.6807 0.68066306 1981 P78406 RAE1 mRNA export factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 69.779 69.155 2 3.1692E-12 79356 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 109.6 100.41 80559000 0 26325000 0 0 2706100 0 2180700 4529100 4610700 2488800 4717400 9790300 5809200 6042700 11358000 3931 1981 3540 34347;34348;34349;34350;34351;34352;34353;34354;34355;34356;34357;34358 27175;27176;27177;27178;27179;27180;27181;27182;27183;27184;27185 27180 11 APPAAPTRPSALELK Unmodified 1517.8566 0.85657723 664 O95466 FMNL1 Formin-like protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.958 52.104 3 0.00089564 58595 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 49.482 30.087 283200000 0 0 0 19555000 21986000 26702000 20817000 24647000 15665000 34490000 24881000 25743000 23303000 22347000 23066000 3932 664 3541 34359;34360;34361;34362;34363;34364;34365;34366;34367;34368;34369;34370 27186;27187;27188;27189;27190;27191;27192;27193;27194;27195 27192 9 APPAPGPASGGSGEVDELFDVK Unmodified 2096.0062 0.006214175 190 O14579 COPE Coatomer subunit epsilon yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.51 3.68 10 1 24 3 6 2 2 2 2 2 2 2 2 2 2 2 2 2 82.738 81.538 2;3 5.8927E-242 97484 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 189.48 183.9 3744600000 215390000 2596100000 18518000 21691000 53599000 60880000 48723000 60954000 52740000 100790000 101640000 127850000 50974000 75451000 159210000 3933 190 3542 34371;34372;34373;34374;34375;34376;34377;34378;34379;34380;34381;34382;34383;34384;34385;34386;34387;34388;34389;34390;34391;34392;34393;34394;34395;34396;34397;34398;34399;34400;34401;34402;34403;34404;34405 27196;27197;27198;27199;27200;27201;27202;27203;27204;27205;27206;27207;27208;27209;27210;27211;27212;27213;27214;27215;27216;27217;27218;27219;27220;27221;27222;27223 27207 25 APPAPPKPEPGEAPGASQCMPLK Oxidation (M) 2342.1399 0.13988766 1628 P50548 ERF ETS domain-containing transcription factor ERF yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 48.824 48.931 3 2.827E-14 55315 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 76.186 61.258 216100000 0 0 0 13829000 16636000 8645800 23147000 21017000 17993000 15653000 21650000 32604000 26010000 18921000 0 3934 1628 3543 34406;34407;34408;34409;34410;34411;34412;34413;34414;34415;34416 27224;27225;27226;27227;27228;27229;27230;27231;27232;27233;27234;27235;27236;27237;27238 27231 2609 14 APPAPPKPEPGEAPGASQCMPLK Unmodified 2326.145 0.14497304 1628 P50548 ERF ETS domain-containing transcription factor ERF yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.525 58.639 3 4.7976E-55 66379 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 117.31 109.36 294350000 0 0 0 12543000 17838000 14463000 17355000 27948000 21327000 24276000 32994000 31772000 33961000 25156000 34712000 3935 1628 3543 34417;34418;34419;34420;34421;34422;34423;34424;34425;34426;34427;34428 27239;27240;27241;27242;27243;27244;27245;27246;27247;27248;27249;27250;27251;27252;27253 27244 15 APPDGWELIEPTLDELDQK Unmodified 2165.0528 0.052830017 1434 P41223 BUD31 Protein BUD31 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 1 4 1 97.496 93.034 2;3 2.7086E-51 112442 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 170.79 142.02 160540000 29761000 123720000 7057200 0 0 0 0 0 0 0 0 0 0 0 0 3936 1434 3544 34429;34430;34431;34432;34433;34434 27254;27255;27256;27257;27258;27259;27260 27258 7 APPELPER Unmodified 907.47633 0.47633123 915 P0DPD7;P0DPD8 yes no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 34.267 34.484 2 0.027721 36754 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.177 31.351 18092000 0 0 0 1992900 0 0 0 0 0 3358500 0 0 3002600 3759500 5978100 3937 915 3545 34435;34436;34437;34438;34439 27261;27262;27263 27262 3 APPGAPGPGPGSGAPGSQEEEEEPGLVEGDPGDGAIEDPELEAIK Unmodified 4304.9721 0.97207968 3140 Q86U42 PABPN1 Polyadenylate-binding protein 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 83.745 83.782 4 1.0256E-26 97276 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 45.168 43.858 68362000 0 0 0 1419500 5451700 0 0 8712900 0 13357000 9054200 10782000 0 4994700 14589000 3938 3140 3546 34440;34441;34442;34443;34444;34445;34446;34447 27264;27265;27266;27267;27268;27269;27270 27269 7 APPGGAEAGEPTTLLQR Unmodified 1663.8529 0.85294842 1536 P48382 RFX5 DNA-binding protein RFX5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.517 60.621 2 6.3206E-19 68751 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 126.1 109.16 182070000 0 0 0 9334400 12264000 10691000 12958000 12674000 11008000 16654000 18073000 28694000 19485000 13511000 16722000 3939 1536 3547 34448;34449;34450;34451;34452;34453;34454;34455;34456;34457;34458;34459 27271;27272;27273;27274;27275;27276;27277;27278;27279;27280;27281;27282;27283 27276 13 APPGGLTQPR Unmodified 992.54033 0.54032847 1536 P48382 RFX5 DNA-binding protein RFX5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 26.643 26.8 2 0.022396 28204 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 85.67 43.561 418260000 0 0 0 40639000 29640000 30411000 38371000 48593000 30023000 34619000 41219000 53295000 40255000 31198000 0 3940 1536 3548 34460;34461;34462;34463;34464;34465;34466;34467;34468;34469;34470 27284;27285;27286 27285 1 APPGPAGLSGGESLLVK Unmodified 1548.8512 0.8511575 4606 Q9NRL3 STRN4 Striatin-4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 75.716 75.836 2 1.9244E-06 87560 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 93.258 77.12 83702000 0 0 0 0 5866200 0 10731000 8878300 0 10777000 11411000 10091000 6577300 7255300 12116000 3941 4606 3549 34471;34472;34473;34474;34475;34476;34477;34478;34479;34480 27287;27288;27289;27290;27291;27292;27293;27294;27295;27296 27294 10 APPHELTEEEK Unmodified 1278.6092 0.6091959 2281 Q13409 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.91 3.42 6 3 24 3 4 2 2 2 2 2 2 2 2 2 2 2 2 2 20.581 19.626 2;3 2.4822E-16 24544 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 163.16 118.81 1434000000 86819000 852850000 31072000 26197000 20838000 28192000 31197000 33044000 24484000 43198000 56689000 54555000 39721000 35189000 69912000 3942 2281 3550 34481;34482;34483;34484;34485;34486;34487;34488;34489;34490;34491;34492;34493;34494;34495;34496;34497;34498;34499;34500;34501;34502;34503;34504;34505;34506;34507;34508;34509;34510;34511;34512;34513 27297;27298;27299;27300;27301;27302;27303;27304;27305;27306;27307;27308;27309;27310;27311;27312;27313;27314;27315;27316;27317;27318;27319;27320;27321;27322;27323;27324;27325;27326;27327;27328;27329;27330 27312 26 APPNATLEHFYLTSGK Unmodified 1744.8784 0.87843489 3845 Q96G23 CERS2 Ceramide synthase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 71.558 71.613 3 0.0015862 82406 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 48.216 38.417 72287000 0 0 0 2865200 4798500 6783900 0 11165000 0 6382700 8174400 10670000 4680600 5652500 11114000 3943 3845 3551 34514;34515;34516;34517;34518;34519;34520;34521;34522;34523 27331;27332 27332 2 APPNYAMK Unmodified 890.43202 0.43202358 3618 Q92541 RTF1 RNA polymerase-associated protein RTF1 homolog yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 23.556 23.641 2 0.034341 24902 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 53.163 36.616 35086000 0 0 0 2589800 2963400 3723100 4739400 3247000 2474900 7657700 6508500 0 0 1182200 0 3944 3618 3552 34524;34525;34526;34527;34528;34529;34530;34531;34532 27333 27333 1 APPNYAMK Oxidation (M) 906.42694 0.4269382 3618 Q92541 RTF1 RNA polymerase-associated protein RTF1 homolog yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 14.913 11.48 2 0.025481 15186 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.847 56.365 27520000 0 27520000 0 0 0 0 0 0 0 0 0 0 0 0 0 3945 3618 3552 34533;34534 27334;27335 27334 2 APPPGLPAETIK Unmodified 1189.6707 0.67067394 956 P11802 CDK4 Cyclin-dependent kinase 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.7 3.52 2 1 7 2 1 1 1 1 1 1 1 1 57.789 56.511 2 0.00014489 69265 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 116.3 100.64 331730000 0 273600000 2166100 0 0 9381600 5531900 0 3651900 6624500 10017000 0 0 6236200 14523000 3946 956 3553 34535;34536;34537;34538;34539;34540;34541;34542;34543;34544 27336;27337;27338;27339;27340;27341;27342;27343;27344;27345;27346 27343 11 APPPPSSPPPGGAPDGSEPSPDFPALLVEK Unmodified 2906.4338 0.4338043 157 O00459 PIK3R2 Phosphatidylinositol 3-kinase regulatory subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 87.658 87.814 3 0.046549 101842 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 15.641 10.433 8757100 0 0 0 0 0 0 0 0 0 2528500 1664900 0 0 0 4563700 3947 157 3554 34545;34546;34547 27347 27347 1 APPPSLTDCIGTVDSR Unmodified 1684.809 0.80903469 4784 Q9NZZ3 CHMP5 Charged multivesicular body protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 2 1 1 2 1 2 2 2 2 2 66.478 66.644 2;3 1.6779E-12 76018 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 98.105 85.125 135450000 0 0 0 0 7931100 5557600 3620000 8912700 3313200 11481000 25711000 28235000 0 17149000 23542000 3948 4784 3555 34548;34549;34550;34551;34552;34553;34554;34555;34556;34557;34558;34559;34560;34561;34562;34563;34564 27348;27349;27350;27351;27352;27353;27354;27355;27356;27357 27356 10 APPPSLTDCIGTVDSRAESIDK Unmodified 2328.1267 0.12674002 4784 Q9NZZ3 CHMP5 Charged multivesicular body protein 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS 4.83 3.67 3 1 2 1 2 1 1 1 76.321 73.109 3 8.6642E-40 89792 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 121.47 115.14 565660000 35733000 433370000 38053000 0 3951300 0 0 0 0 0 0 54549000 0 0 0 3949 4784 3556 34565;34566;34567;34568;34569;34570 27358;27359;27360;27361;27362;27363;27364 27363 7 APPQTHLPSGASSGTGSASATHGGGSPPGTR Unmodified 2784.3175 0.31754576 1502 P46379 BAG6 Large proline-rich protein BAG6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 2 2 1 2 2 2 2 2 2 2 2 33.657 33.868 3;4 2.7889E-112 36987 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 126.88 120.23 434820000 0 0 0 14372000 25583000 34209000 22433000 35627000 14250000 47508000 59442000 62167000 29885000 40480000 48864000 3950 1502 3557 34571;34572;34573;34574;34575;34576;34577;34578;34579;34580;34581;34582;34583;34584;34585;34586;34587;34588;34589;34590;34591;34592 27365;27366;27367;27368;27369;27370;27371;27372;27373;27374;27375;27376;27377;27378;27379;27380 27366 15 APPQTHLPSGASSGTGSASATHGGGSPPGTRGPGASVHDR Unmodified 3660.7378 0.7377591 1502 P46379 BAG6 Large proline-rich protein BAG6 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 34.301 34.532 5 6.7902E-17 38205 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 38.622 34.046 49862000 0 0 0 0 2949900 0 3447900 7180400 0 6166100 0 17913000 0 0 12205000 3951 1502 3558 34593;34594;34595;34596;34597;34598 27381;27382;27383 27383 3 APPSQLEQK Unmodified 996.52401 0.52400971 5308 no no 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 19.146 19.412 2 0.0075471 19867 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 72.138 11.378 + 61753000 0 0 0 0 0 23835000 0 0 0 0 21744000 0 0 16174000 0 3952 5308 3559 34599;34600;34601 27384;27385;27386 27384 3 APPSVFAEVPQAQPVLVFK Unmodified 2023.1142 0.11424848 1049 P17174 GOT1 Aspartate aminotransferase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.12 3.89 6 2 8 2 4 2 2 2 2 2 93.99 91.723 2;3 2.7083E-121 114039 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 210.91 205.52 510660000 18367000 427220000 2827200 0 0 0 0 0 0 0 8538900 6282100 0 4544500 42877000 3953 1049 3560 34602;34603;34604;34605;34606;34607;34608;34609;34610;34611;34612;34613;34614;34615;34616;34617 27387;27388;27389;27390;27391;27392;27393;27394;27395;27396;27397;27398;27399;27400 27387 12 APPTLQAETATKPQATSAPSPAPK Unmodified 2359.2383 0.23833938 35 A8CG34;Q96HA1 POM121C;POM121 Nuclear envelope pore membrane protein POM 121C;Nuclear envelope pore membrane protein POM 121 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 47.682 47.854 3 1.0795E-67 53696 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 120.52 116.57 93321000 0 0 0 4037500 5853400 0 8259900 9636700 5719200 11583000 9107000 9810200 9912900 10516000 8884900 3954 35 3561 34618;34619;34620;34621;34622;34623;34624;34625;34626;34627;34628 27401;27402;27403;27404;27405;27406;27407;27408;27409;27410;27411;27412 27401 12 APPVPAPAR Unmodified 874.50249 0.5024864 2921 Q6P1N0 CC2D1A Coiled-coil and C2 domain-containing protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 29.889 30.034 2 0.0057755 32391 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 76.833 39.845 69104000 0 0 0 4557900 4104800 5315400 5993300 3545700 3845700 6343300 7804400 0 8379900 6282400 12931000 3955 2921 3562 34629;34630;34631;34632;34633;34634;34635;34636;34637;34638;34639 27413;27414;27415;27416;27417;27418;27419;27420;27421;27422;27423 27421 11 APPYQEPPWGGPATAPYSLETLK Unmodified 2469.2216 0.22162668 4215 Q9BWU0 SLC4A1AP Kanadaptin yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 87.828 87.949 3 0.033908 101747 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 18.825 15.092 7884100 0 0 0 0 0 0 0 0 0 1475000 0 0 0 875890 5533300 3956 4215 3563 34640;34641;34642 27424 27424 1 APQALER Unmodified 783.4239 0.42390173 3108 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes yes 0 0 0 By MS/MS 10 0 1 1 13.442 13.874 2 0.029947 13030 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 75.189 16.585 34369000 0 0 0 0 0 0 0 0 0 0 0 34369000 0 0 0 3957 3108 3564 34643 27425 27425 1 APQAPLHSVVQQLHGK Unmodified 1708.9373 0.93728717 2531 Q15418 RPS6KA1 Ribosomal protein S6 kinase alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 55.231 55.361 3 0.020368 62618 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 23.336 16.756 15507000 0 0 0 0 0 5361600 2661100 3428400 0 0 0 0 0 4056500 0 3958 2531 3565 34644;34645;34646;34647 27426 27426 1 APQDVEMK Unmodified 916.43242 0.43241751 113 E9PRG8 C11orf98 Uncharacterized protein C11orf98 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 17.793 17.692 2 0.013245 18137 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 72.789 47.791 115030000 0 17348000 0 4325800 4611600 4212200 4286700 5726500 4096400 7847300 9879800 16868000 10387000 11424000 14012000 3959 113 3566 34648;34649;34650;34651;34652;34653;34654;34655;34656;34657;34658;34659;34660 27427;27428;27429;27430;27431;27432;27433;27434;27435;27436;27437 27428 11 APQDVEMK Oxidation (M) 932.42733 0.42733213 113 E9PRG8 C11orf98 Uncharacterized protein C11orf98 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 7.3262 7.4256 2 0.010039 4406 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 69.198 37.084 27151000 0 0 0 1363300 1627000 1115100 2198700 1487300 2359100 0 0 5472800 5191800 3283500 3052700 3960 113 3566 34661;34662;34663;34664;34665;34666;34667;34668;34669;34670 27438;27439 27438 147 2 APQESQVVVEGGSGEGQGSPSQLLSDDETK Unmodified 3014.3952 0.39524654 2843 Q66K14 TBC1D9B TBC1 domain family member 9B yes yes 0 0 0 By MS/MS 10 0 1 1 69.872 69.84 3 8.792E-08 80410 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 35.923 28.302 2766200 0 0 0 0 0 2766200 0 0 0 0 0 0 0 0 0 3961 2843 3567 34671 27440 27440 1 APQETYADIGGLDNQIQEIK Unmodified 2202.0804 0.080441751 1875 P62191 PSMC1 26S protease regulatory subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.89 2.72 3 1 24 1 2 1 2 2 2 2 2 2 2 2 2 2 2 2 80.81 80.196 2;3 2.0845E-193 92755 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 268.61 259.16 2584200000 9691200 1734300000 2195400 9745200 59261000 68038000 15948000 26865000 21477000 169950000 123870000 185840000 17341000 28727000 110940000 3962 1875 3568 34672;34673;34674;34675;34676;34677;34678;34679;34680;34681;34682;34683;34684;34685;34686;34687;34688;34689;34690;34691;34692;34693;34694;34695;34696;34697;34698;34699 27441;27442;27443;27444;27445;27446;27447;27448;27449;27450;27451;27452;27453;27454;27455;27456;27457;27458 27445 18 APQEVEEDDGRSGAGEDPPMPASR Unmodified 2496.0823 0.082309019 5273 Q9Y6A5 TACC3 Transforming acidic coiled-coil-containing protein 3 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 40.688 41.14 3 1.4955E-09 45715 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 61.136 57.473 20585000 0 0 0 0 0 0 0 0 0 8370100 0 0 0 0 12215000 3963 5273 3569 34700;34701 27459;27460 27459 2 APQFQESVGSFR Unmodified 1351.6521 0.65206377 2810 Q5VT52 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 1 1 2 60.472 60.614 2 2.2841E-05 68543 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 120.09 98.004 60148000 0 0 0 3003400 3779100 4175000 3315300 3460700 2844500 4123300 6872700 8022800 4678300 4055600 11818000 3964 2810 3570 34702;34703;34704;34705;34706;34707;34708;34709;34710;34711;34712;34713;34714 27461;27462;27463;27464;27465;27466;27467;27468;27469;27470;27471;27472 27464 12 APQHAQQSIREK Unmodified 1391.727 0.72696004 1101 P20248 CCNA2 Cyclin-A2 yes yes 0 0 1 By MS/MS 2 0 1 1 8.1026 4.5875 3 0.00071204 7890 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.026 68.197 92018000 92018000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3965 1101 3571 34715 27473 27473 1 APQHTAVGFK Unmodified 1054.556 0.55597854 308 O43242 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.47 3.59 3 2 10 2 2 1 1 1 1 1 1 1 1 1 1 1 21.047 19.741 2 2.8453E-08 27798 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 154.01 126.13 965910000 660150000 119480000 118430000 6229200 7967600 8364600 2805900 3352700 1992900 18344000 0 0 3957400 3913600 10932000 3966 308 3572 34716;34717;34718;34719;34720;34721;34722;34723;34724;34725;34726;34727;34728;34729;34730 27474;27475;27476;27477;27478;27479;27480;27481;27482;27483 27479 10 APQLVGQFIAR Unmodified 1198.6822 0.68224168 2696 Q53EL6 PDCD4 Programmed cell death protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.784 74.848 2 4.9505E-05 86171 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 115.49 105.91 238130000 0 0 0 8285100 9937300 24109000 11496000 15538000 9798200 22642000 21583000 28386000 17903000 21155000 47293000 3967 2696 3573 34731;34732;34733;34734;34735;34736;34737;34738;34739;34740;34741;34742 27484;27485;27486;27487;27488;27489;27490;27491;27492;27493;27494;27495 27493 11 APQPTSPPASR Unmodified 1107.5673 0.5672715 3158 Q86UW9 DTX2 Probable E3 ubiquitin-protein ligase DTX2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 16.262 16.372 2 0.0062482 15690 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.032 29.296 12098000 0 0 0 0 1977600 1785600 0 1832800 0 0 0 6501700 0 0 0 3968 3158 3574 34743;34744;34745;34746 27496 27496 1 APQQEEGPK Unmodified 982.47197 0.47197413 1351 P35269 GTF2F1 General transcription factor IIF subunit 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 6.7308 3.3932 2 0.0083515 5420 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.37 8.1293 28762000 9960500 18802000 0 0 0 0 0 0 0 0 0 0 0 0 0 3969 1351 3575 34747;34748 27497;27498 27497 1 APQSTGPPPAPSPGLPQPAFPPGQTAPVVFSTPQATQMNTPSQPR Oxidation (M) 4547.2543 0.25434715 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 1 0 By matching By MS/MS 10 0 2 1 1 88.506 88.404 4 2.785E-19 102332 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.756 34.497 12247000 0 0 0 918260 0 0 0 0 0 0 0 0 0 0 11329000 3970 2102 3576 34749;34750 27499 27499 3399 1 APQSTGPPPAPSPGLPQPAFPPGQTAPVVFSTPQATQMNTPSQPR Unmodified 4531.2594 0.25943253 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 0 By MS/MS 10 0 1 1 89.725 89.869 4 3.2386E-08 104189 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 26.05 24.816 2542700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2542700 3971 2102 3576 34751 27500 27500 1 APQTLPSPEADALAGSK Unmodified 1651.8417 0.84171503 1298 P31274 HOXC9 Homeobox protein Hox-C9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 62.31 62.423 2 0.0018557 70743 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.568 29.325 21373000 0 0 0 2531300 0 0 3089200 0 0 3439200 3980500 0 3659100 0 4674200 3972 1298 3577 34752;34753;34754;34755;34756;34757 27501;27502;27503;27504 27502 4 APQTPSALLGQK Unmodified 1209.6717 0.67173657 2648 Q2KHR2 RFX7 DNA-binding protein RFX7 yes yes 0 0 0 By MS/MS 3 0 1 1 56.758 51.906 2 0.027735 64118 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 45.368 28.592 1616200 0 1616200 0 0 0 0 0 0 0 0 0 0 0 0 0 3973 2648 3578 34758 27505 27505 1 APQVDVDK Unmodified 870.4447 0.44469675 1440 P41250 GARS Glycine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 2 1 1 1 1 1 1 1 1 1 18.999 19.176 2 0.0058845 18248 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 105.14 55.546 318020000 0 0 0 14263000 14100000 21202000 0 13464000 11864000 25563000 37958000 41695000 23235000 33144000 81533000 3974 1440 3579 34759;34760;34761;34762;34763;34764;34765;34766;34767;34768;34769;34770 27506;27507;27508;27509;27510;27511;27512;27513;27514 27511 8 APQVLVLAPTR Unmodified 1163.7026 0.70264277 4588 Q9NR30 DDX21 Nucleolar RNA helicase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.911 69.987 2 0.00043138 80212 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 85.533 66.439 86393000 0 0 0 3803400 4283800 7462600 5386000 5062300 4961600 9049400 8918900 11893000 8850200 6513700 10209000 3975 4588 3580 34771;34772;34773;34774;34775;34776;34777;34778;34779;34780;34781;34782 27515;27516;27517;27518;27519;27520;27521;27522;27523;27524;27525;27526;27527 27520 13 APQVRAASAPAK Unmodified 1165.6568 0.65675521 2289 Q13428 TCOF1 Treacle protein yes yes 0 0 1 By MS/MS 2 0 2 2 18.736 14.151 2;3 0.009379 20756 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.29 42.036 74424000 74424000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3976 2289 3581 34783;34784 27528;27529 27529 1 APQVVAEAAK Unmodified 982.54475 0.54474515 436 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 26.556 25.756 2 0.0016258 27796 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 104.42 62.921 417150000 3541700 126600000 0 16904000 17557000 17255000 23124000 16402000 20313000 27999000 23201000 39682000 19615000 24446000 40503000 3977 436 3582 34785;34786;34787;34788;34789;34790;34791;34792;34793;34794;34795;34796;34797;34798;34799 27530;27531;27532;27533;27534;27535;27536;27537;27538;27539;27540;27541;27542;27543 27532 11 APRGDVTAEEAAGASPAK Unmodified 1696.838 0.83802663 1557 P49006 MARCKSL1 MARCKS-related protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.16 3.28 4 2 19 4 2 1 1 2 1 2 1 2 2 1 2 2 2 28.44 27.575 2;3 6.3983E-27 29493 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 129.38 84.762 780130000 0 209010000 79406000 0 32384000 39044000 32727000 40937000 30955000 117450000 20813000 15520000 25809000 70747000 65326000 3978 1557 3583 34800;34801;34802;34803;34804;34805;34806;34807;34808;34809;34810;34811;34812;34813;34814;34815;34816;34817;34818;34819;34820;34821;34822;34823;34824 27544;27545;27546;27547;27548;27549;27550;27551;27552;27553;27554;27555;27556;27557;27558;27559;27560;27561;27562;27563;27564;27565;27566;27567;27568;27569;27570;27571 27569 25 APRGSSSQGPSQTSTPTDVTAIHL Unmodified 2394.1775 0.17753003 1274 P30281 CCND3 G1/S-specific cyclin-D3 yes yes 0 0 1 By MS/MS 2 0 1 1 75.793 67.663 3 1.227E-12 89230 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.942 72.666 16020000 16020000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3979 1274 3584 34825 27572 27572 1 APRPFGSVSSPK Unmodified 1228.6564 0.65642086 3865 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.568 33.751 3 1.947E-05 36624 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 80.312 54.194 167370000 0 0 0 8253900 9447200 11415000 9845000 11934000 7038300 16883000 20231000 21681000 9947500 12518000 28180000 3980 3865 3585 34826;34827;34828;34829;34830;34831;34832;34833;34834;34835;34836;34837 27573;27574;27575;27576;27577;27578;27579;27580;27581;27582;27583;27584 27578 11 APRPTIINAENLK Unmodified 1435.8147 0.81471242 2736 Q5JSZ5 PRRC2B Protein PRRC2B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 51.864 51.764 3 0.0035002 58628 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 49.356 27.725 27900000 0 0 0 0 7645300 0 7569400 0 0 12685000 0 0 0 0 0 3981 2736 3586 34838;34839;34840 27585;27586 27585 2 APSDLYQIILK Unmodified 1259.7125 0.71253876 841 P07384 CAPN1 Calpain-1 catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86.792 85.814 2 2.2502E-07 98796 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 145.25 83.286 751320000 9450700 128350000 3702100 23316000 26507000 41251000 43059000 52051000 42475000 51631000 56349000 52961000 42685000 43672000 133870000 3982 841 3587 34841;34842;34843;34844;34845;34846;34847;34848;34849;34850;34851;34852;34853;34854;34855 27587;27588;27589;27590;27591;27592;27593;27594;27595;27596;27597;27598;27599;27600;27601;27602;27603;27604;27605;27606 27600 20 APSDSSLGTPSDGRPELR Unmodified 1840.8915 0.89151877 2555 Q15642 TRIP10 Cdc42-interacting protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 42.274 42.453 3 0.00025225 47083 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 56.215 50.32 91087000 0 0 0 3881400 5023500 11082000 6450000 4520700 0 10101000 8764100 9057600 5519800 7180800 19507000 3983 2555 3588 34856;34857;34858;34859;34860;34861;34862;34863;34864;34865;34866 27607;27608;27609;27610;27611;27612;27613;27614;27615 27608 9 APSDSSLGTPSDGRPELRGPGR Unmodified 2208.0883 0.088321095 2555 Q15642 TRIP10 Cdc42-interacting protein 4 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 42.174 42.604 4 7.4562E-07 47061 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.588 40.074 48988000 0 0 0 0 0 9773600 0 0 0 0 0 8196100 7218900 7288200 16512000 3984 2555 3589 34867;34868;34869;34870;34871 27616;27617;27618;27619 27619 4 APSEEDSLSSVPISPYK Unmodified 1804.8731 0.87307474 5266 Q9Y676 MRPS18B 28S ribosomal protein S18b, mitochondrial yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 72.085 72.168 2 0.0001465 83439 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 85.258 71.353 22767000 0 0 0 0 1418600 4454100 0 0 0 3315900 2975700 0 3215800 2872500 4514100 3985 5266 3590 34872;34873;34874;34875;34876;34877;34878;34879 27620;27621;27622;27623;27624 27623 5 APSEEELHGDQTDFGQGSQSPQK Unmodified 2471.0837 0.083689228 3512 Q8TE77 SSH3 Protein phosphatase Slingshot homolog 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 8.25 3.03 1 3 1 2 1 41.812 40.511 3 0.00012928 49270 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 60.032 57.419 21402000 0 6879700 0 0 0 0 0 0 0 5059300 0 0 0 0 9463100 3986 3512 3591 34880;34881;34882;34883 27625;27626;27627;27628 27628 4 APSEIDPR Unmodified 883.43995 0.43994572 692 O95801 TTC4 Tetratricopeptide repeat protein 4 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 20.046 20.513 2 0.017656 20056 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 65.313 23.421 26379000 0 0 0 0 0 0 0 0 0 0 0 0 0 11171000 15208000 3987 692 3592 34884;34885 27629;27630 27630 2 APSENWAMEGGMDPESLLEGDDGK Oxidation (M) 2550.0526 0.052648375 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 1 0 By MS/MS 2.33 0.471 2 1 3 88.076 84.048 2;3 1.233E-94 104384 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 169.64 163.21 21309000 0 21309000 0 0 0 0 0 0 0 0 0 0 0 0 0 3988 1201 3593 34886;34887;34888 27631;27632;27633 27632 1750;1751 3 APSENWAMEGGMDPESLLEGDDGK Unmodified 2534.0577 0.057733752 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 91.802 87.74 3 7.715E-08 108873 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 44.711 43.486 38432000 0 38432000 0 0 0 0 0 0 0 0 0 0 0 0 0 3989 1201 3593 34889;34890 27634;27635 27634 2 APSENWAMEGGMDPESLLEGDDGK 2 Oxidation (M) 2566.0476 0.047562997 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 2 0 By MS/MS 3 0 1 1 80.541 77.209 3 2.79E-05 92596 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 60.171 59.349 11155000 0 11155000 0 0 0 0 0 0 0 0 0 0 0 0 0 3990 1201 3593 34891 27636 27636 1750;1751 1 APSESARGPPGPTDGAK Unmodified 1593.7747 0.7746981 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 20.724 17.51 3 0.0036787 22962 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 47.68 35.119 24011000 0 18697000 5314100 0 0 0 0 0 0 0 0 0 0 0 0 3991 645 3594 34892;34893 27637;27638 27637 2 APSGRDEPCLLK Unmodified 1341.6711 0.67108465 487 O75369 FLNB Filamin-B yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 41.239 36.068 3 0.018532 45311 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 46.985 24.1 164000000 54392000 0 109600000 0 0 0 0 0 0 0 0 0 0 0 0 3992 487 3595 34894;34895 27639 27639 1 APSGTSLEVPIPEGLNGQK Unmodified 1892.9844 0.98435652 2600 Q16254 E2F4 Transcription factor E2F4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.944 80.048 2 0.0001876 92284 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.565 73.052 35895000 0 0 0 0 1636100 2125900 2400500 3440400 1959700 4727800 2686400 3938300 3993100 2731300 6255800 3993 2600 3596 34896;34897;34898;34899;34900;34901;34902;34903;34904;34905;34906 27640;27641;27642;27643;27644;27645;27646 27642 7 APSHSESALNNDSK Unmodified 1455.659 0.65899964 4762 Q9NZB2 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 8.1196 8.2297 3 1.6129E-05 6704 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 79.81 70.76 59873000 0 0 0 3036400 2815800 2076800 3264200 2705000 2363500 5531600 0 11691000 9554500 7609200 9224500 3994 4762 3597 34907;34908;34909;34910;34911;34912;34913;34914;34915;34916;34917 27647;27648;27649;27650;27651;27652;27653;27654;27655;27656;27657 27655 11 APSIATIK Unmodified 799.48035 0.48035398 2966 Q6R327 RICTOR Rapamycin-insensitive companion of mTOR yes yes 0 0 0 By MS/MS 3 0 1 1 42.53 37.792 2 0.021166 47144 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 109.01 34.597 11471000 0 11471000 0 0 0 0 0 0 0 0 0 0 0 0 0 3995 2966 3598 34918 27658 27658 0 APSIDGKEELDLAEK Unmodified 1613.8148 0.81483158 4326 Q9H0E9 BRD8 Bromodomain-containing protein 8 yes yes 0 0 1 By MS/MS 10 0 1 1 56.086 56.711 3 0.01062 63676 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.853 33.583 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3996 4326 3599 34919 27659 27659 1 APSIIFIDELDAIGTK Unmodified 1701.9189 0.91890272 1066 P17980 PSMC3 26S protease regulatory subunit 6A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 5.18 3.66 4 3 4 2 4 1 1 1 1 1 97.365 94.642 2;3 1.1346E-14 111580 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 119.76 112.88 262170000 86413000 150750000 17147000 914430 0 0 0 0 0 2723700 1964900 0 0 0 2259700 3997 1066 3600 34920;34921;34922;34923;34924;34925;34926;34927;34928;34929;34930 27660;27661;27662;27663;27664;27665;27666;27667;27668;27669;27670;27671;27672;27673 27670 14 APSLTDLVK Unmodified 942.5386 0.53859714 240 O15014 ZNF609 Zinc finger protein 609 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.17 3.85 2 1 3 2 1 1 1 1 72.857 69.979 2 0.0085907 88264 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.698 28.938 87230000 0 77538000 1842900 0 0 0 0 0 0 0 0 0 0 7848400 0 3998 240 3601 34931;34932;34933;34934;34935;34936 27674;27675;27676;27677;27678 27674 5 APSPAPSSVPLGSEK Unmodified 1422.7355 0.73545904 472 O75179 ANKRD17 Ankyrin repeat domain-containing protein 17 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.699 46.865 2 4.5931E-57 52707 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 205.49 190.15 438790000 0 0 0 24604000 22299000 26362000 29954000 24573000 30139000 48162000 51566000 46694000 40053000 37892000 56488000 3999 472 3602 34937;34938;34939;34940;34941;34942;34943;34944;34945;34946;34947;34948 27679;27680;27681;27682;27683;27684;27685;27686;27687;27688;27689 27687 10 APSPAPSSVPLGSEKPSNVSQDR Unmodified 2306.1503 0.15025265 472 O75179 ANKRD17 Ankyrin repeat domain-containing protein 17 yes yes 0 0 1 By MS/MS 10 0 1 1 48.476 49.211 3 0.00018381 55113 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 38.175 32.361 8753300 0 0 0 0 0 0 0 0 0 0 0 8753300 0 0 0 4000 472 3603 34949 27690 27690 1 APSPRPGPGPLR Unmodified 1200.6727 0.67273963 3542 Q8WUF5 PPP1R13L RelA-associated inhibitor yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.823 28.02 3 0.00027573 30067 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 59.265 36.936 439900000 0 0 0 35088000 27803000 39442000 31948000 25470000 29275000 42455000 43355000 48465000 43467000 22418000 50710000 4001 3542 3604 34950;34951;34952;34953;34954;34955;34956;34957;34958;34959;34960;34961 27691;27692;27693;27694;27695;27696;27697;27698;27699;27700 27694 7 APSPTSSAGEEGTK Unmodified 1317.6048 0.6048388 610 O94964 SOGA1 Protein SOGA1;N-terminal form;C-terminal 80 kDa form yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.091 12.239 2 0.00036794 10591 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.944 67.377 16258000 0 0 0 939610 990170 1877100 937500 822970 1029800 1870500 849870 2335600 1623400 1403600 1578000 4002 610 3605 34962;34963;34964;34965;34966;34967;34968;34969;34970;34971;34972;34973 27701;27702;27703;27704;27705;27706;27707;27708;27709;27710 27704 10 APSQAAESSPAK Unmodified 1142.5568 0.5567664 3448 Q8NFH8 REPS2 RalBP1-associated Eps domain-containing protein 2 yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 8.0655 8.1884 2 0.013115 6180 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 44.203 21.463 5345900 0 0 0 0 0 661950 624010 842640 1104400 1161600 0 0 0 951350 0 4003 3448 3606 34974;34975;34976;34977;34978;34979 27711 27711 1 APSQLPLSGSR Unmodified 1111.5986 0.59857163 4199 Q9BW19 KIFC1 Kinesin-like protein KIFC1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.666 41.843 2 0.00038093 47436 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 87.258 54.938 180570000 0 0 0 8079600 9682200 14419000 12342000 11447000 12075000 16121000 20430000 21763000 19605000 13123000 21485000 4004 4199 3607 34980;34981;34982;34983;34984;34985;34986;34987;34988;34989;34990;34991 27712;27713;27714;27715;27716;27717;27718 27717 4 APSRDEGSLLLGSR Unmodified 1456.7634 0.76340513 2518 Q15345 LRRC41 Leucine-rich repeat-containing protein 41 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 47.394 47.62 3 0.025101 52373 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 28.283 16.082 78423000 0 0 0 5652300 0 9896200 3873100 5077900 4007000 7483300 7804200 10827000 7498600 6711400 9592300 4005 2518 3608 34992;34993;34994;34995;34996;34997;34998;34999;35000;35001;35002 27719 27719 1 APSRQDVYGPQPQVR Unmodified 1696.8645 0.86451616 426 O60716 CTNND1 Catenin delta-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.677 33.86 3 2.5176E-14 36114 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.81 71.634 187440000 0 0 0 10369000 10688000 17010000 10457000 10465000 8484300 19235000 21717000 24408000 15303000 18836000 20472000 4006 426 3609 35003;35004;35005;35006;35007;35008;35009;35010;35011;35012;35013;35014 27720;27721;27722;27723;27724;27725;27726;27727;27728;27729;27730;27731;27732;27733;27734;27735 27724 16 APSSLIDDCMEK Oxidation (M) 1380.5901 0.59011671 398 O60343 TBC1D4 TBC1 domain family member 4 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 42.258 37.341 2 3.756E-05 48306 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.973 89.108 32034000 0 32034000 0 0 0 0 0 0 0 0 0 0 0 0 0 4007 398 3610 35015;35016 27736 27736 502 1 APSSLIDDCMEK Unmodified 1364.5952 0.59520209 398 O60343 TBC1D4 TBC1 domain family member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 53.452 52.404 2 0.0051428 66788 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.53 62.323 79636000 0 54919000 0 0 0 0 0 0 0 0 0 9090600 5191600 0 10435000 4008 398 3610 35017;35018;35019;35020 27737;27738 27737 2 APSSLSDAVPQR Unmodified 1226.6255 0.62551466 3252 Q8IX01 SUGP2 SURP and G-patch domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 40.892 40.968 2 2.4435E-05 45887 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 92.538 66.979 33295000 0 0 0 3901800 3407300 4329000 3712800 0 2937400 0 0 5597300 4706300 4703000 0 4009 3252 3611 35021;35022;35023;35024;35025;35026;35027;35028;35029;35030 27739;27740;27741;27742;27743;27744;27745;27746;27747;27748 27739 10 APSSQTFSLARPK Unmodified 1388.7412 0.74121312 3134 Q86TC9 MYPN Myopalladin yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 2 1 2 2 2 2 2 2 2 1 2 42.937 43.147 2;3 7.2651E-33 48840 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 166.7 144.93 1074600000 0 0 0 62933000 70406000 47082000 80955000 92818000 70722000 73896000 125990000 155500000 97998000 62611000 133650000 4010 3134 3612 35031;35032;35033;35034;35035;35036;35037;35038;35039;35040;35041;35042;35043;35044;35045;35046;35047;35048;35049;35050;35051 27749;27750;27751;27752;27753;27754;27755;27756;27757;27758;27759;27760;27761;27762;27763;27764;27765;27766 27765 14 APSSSSLNSATSSQSK Unmodified 1537.722 0.72199382 2723 Q5F1R6 DNAJC21 DnaJ homolog subfamily C member 21 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.149 18.338 2 5.5629E-29 16819 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 142.91 130.33 106620000 0 0 0 7176900 6744000 8930600 8362800 6426100 5114700 13693000 11989000 9975300 7729400 8114100 12365000 4011 2723 3613 35052;35053;35054;35055;35056;35057;35058;35059;35060;35061;35062;35063 27767;27768;27769;27770;27771;27772;27773;27774;27775;27776;27777;27778 27774 12 APSTPLLTVR Unmodified 1053.6182 0.61824444 4242 Q9BY44 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.691 60.796 2 0.0049755 69482 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 70.816 50.819 122080000 0 0 0 4209200 2664600 14244000 6732700 5952600 3382500 12285000 13259000 11087000 7643100 12600000 28023000 4012 4242 3614 35064;35065;35066;35067;35068;35069;35070;35071;35072;35073;35074;35075 27779;27780;27781;27782;27783;27784;27785;27786;27787 27784 7 APSTPVPPSPAPAPGLTK Unmodified 1683.9196 0.91957142 3830 Q96EZ8 MCRS1 Microspherule protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 62.841 62.815 2 1.4259E-05 71659 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 91.914 67.06 47434000 0 0 0 4958700 3822100 4881600 6890500 6975600 4291200 0 7314200 0 0 8300100 0 4013 3830 3615 35076;35077;35078;35079;35080;35081;35082;35083;35084 27788;27789;27790;27791;27792;27793;27794;27795;27796 27792 9 APSTSDSVR Unmodified 918.44067 0.44067401 1149 P23193 TCEA1 Transcription elongation factor A protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 7.5585 7.6786 2 0.0069711 5587 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 73.665 34.446 73853000 0 0 0 0 4631700 5484300 7142800 7818400 7324400 5862600 19704000 10161000 5723200 0 0 4014 1149 3616 35085;35086;35087;35088;35089;35090;35091;35092;35093 27797;27798 27798 2 APSTYGGGLSVSSR Unmodified 1337.6575 0.65754307 70 CON__P08779;P08779 KRT16 Keratin, type I cytoskeletal 16 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 2 1 1 1 2 1 1 1 2 1 1 41.673 41.821 2 5.0356E-19 46866 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 132.62 124.16 + 1349200000 0 0 0 200410000 49783000 19388000 0 135640000 0 86033000 48870000 49316000 676280000 47303000 36203000 4015 70 3617 35094;35095;35096;35097;35098;35099;35100;35101;35102;35103;35104;35105;35106;35107 27799;27800;27801;27802;27803;27804;27805;27806;27807;27808;27809;27810;27811;27812;27813;27814 27811 15 APSTYGGGLSVSSSR Unmodified 1424.6896 0.68957148 56 CON__P02533;P02533 KRT14 Keratin, type I cytoskeletal 14 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 25 1 2 2 2 2 2 2 3 3 1 2 3 41.614 41.87 2 4.0806E-28 46608 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 172.11 141.43 + 4562400000 0 0 0 805620000 241010000 193890000 152420000 878650000 143790000 403960000 337350000 317870000 756090000 152160000 179550000 4016 56 3618 35108;35109;35110;35111;35112;35113;35114;35115;35116;35117;35118;35119;35120;35121;35122;35123;35124;35125;35126;35127;35128;35129;35130;35131;35132 27815;27816;27817;27818;27819;27820;27821;27822;27823;27824;27825;27826;27827;27828;27829;27830;27831;27832;27833;27834;27835;27836;27837;27838;27839;27840;27841;27842;27843;27844;27845 27838 29 APSVATVGSICDLNLK Unmodified 1643.8553 0.8552566 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 79.195 79.26 2 2.3185E-23 91615 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 134.99 85.489 65746000 0 0 0 0 3178500 6583700 0 0 0 0 11958000 17207000 0 0 26818000 4017 487 3619 35133;35134;35135;35136;35137 27846;27847;27848;27849;27850;27851 27846 5 APSVPAAEPEYPK Unmodified 1354.6769 0.67688153 1748 P54819 AK2 Adenylate kinase 2, mitochondrial;Adenylate kinase 2, mitochondrial, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 50.091 48.697 2 1.1146E-12 56333 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 128.81 90.724 705730000 12802000 181830000 0 20779000 18092000 47592000 35371000 33264000 45625000 52224000 62129000 59874000 28853000 43629000 63663000 4018 1748 3620 35138;35139;35140;35141;35142;35143;35144;35145;35146;35147;35148;35149;35150;35151;35152;35153 27852;27853;27854;27855;27856;27857;27858;27859;27860;27861;27862;27863;27864;27865;27866;27867;27868;27869 27868 18 APSWFDTGLSEMR Oxidation (M) 1511.6715 0.67147858 756 P02511 CRYAB Alpha-crystallin B chain yes yes 0 1 0 By MS/MS By matching 10 0 2 1 1 77.267 77.124 2 0.0068651 89540 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 43.308 33.354 2686200 0 0 0 1273400 0 0 0 1412800 0 0 0 0 0 0 0 4019 756 3621 35154;35155 27870 27870 907 1 APSYIEIFGR Unmodified 1151.5975 0.597509 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 80.947 80.605 2 0.0096777 93587 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 69.812 60.418 3489800 0 0 0 1820400 1669400 0 0 0 0 0 0 0 0 0 0 4020 2775 3622 35156;35157;35158;35159;35160;35161;35162;35163;35164 27871;27872;27873;27874;27875;27876;27877;27878;27879 27878 9 APSYLEISSMR Oxidation (M) 1268.6071 0.60708741 1977 P78347 GTF2I General transcription factor II-I yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 55.544 55.648 2 0.00034891 62887 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 82.261 60.024 373870000 0 0 0 25329000 33365000 32892000 29028000 20149000 23128000 44543000 0 63200000 36545000 27252000 38442000 4021 1977 3623 35165;35166;35167;35168;35169;35170;35171;35172;35173;35174;35175 27880;27881;27882;27883;27884;27885;27886;27887;27888;27889;27890;27891;27892 27881 3179 12 APSYLEISSMR Unmodified 1252.6122 0.61217279 1977 P78347 GTF2I General transcription factor II-I yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.677 69.752 2 4.6238E-11 80163 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 154.85 132.07 493080000 0 0 0 25884000 34084000 36396000 23722000 30087000 22317000 44297000 50472000 56038000 33390000 46453000 89942000 4022 1977 3623 35176;35177;35178;35179;35180;35181;35182;35183;35184;35185;35186;35187 27893;27894;27895;27896;27897;27898;27899;27900;27901;27902;27903;27904;27905;27906;27907;27908;27909 27896 17 APSYLEISSMRR Unmodified 1408.7133 0.71328381 1977 P78347 GTF2I General transcription factor II-I yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 58.893 59.006 2;3 4.8123E-06 66431 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 117.02 96.152 438390000 0 0 0 23499000 18253000 40637000 25751000 36159000 29405000 30256000 40665000 38993000 28552000 42388000 83834000 4023 1977 3624 35188;35189;35190;35191;35192;35193;35194;35195;35196;35197;35198;35199;35200;35201;35202;35203;35204;35205;35206;35207;35208;35209;35210;35211 27910;27911;27912;27913;27914;27915;27916;27917;27918;27919;27920;27921;27922;27923 27914 10 APSYLEISSMRR Oxidation (M) 1424.7082 0.70819844 1977 P78347 GTF2I General transcription factor II-I yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 46.473 46.658 3 0.0019558 51606 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 49.423 37.4 715860000 0 0 0 0 81371000 0 104120000 0 55790000 102670000 107790000 188400000 0 75718000 0 4024 1977 3624 35212;35213;35214;35215;35216;35217;35218 27924;27925;27926 27926 3179 2 APTDYCLVLK Unmodified 1178.6005 0.60054547 3025 Q70E73 RAPH1 Ras-associated and pleckstrin homology domains-containing protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 72.4 67.365 2 0.0085374 85573 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.113 44.024 67764000 0 67764000 0 0 0 0 0 0 0 0 0 0 0 0 0 4025 3025 3625 35219;35220 27927 27927 1 APTIEQMK Unmodified 916.4688 0.46880301 1236 P28482 MAPK1 Mitogen-activated protein kinase 1 yes yes 0 0 0 By matching By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 30.731 30.705 2 0.042907 32927 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 49.442 25.239 42478000 0 0 0 7368200 5202400 12713000 0 5841300 0 0 11353000 0 0 0 0 4026 1236 3626 35221;35222;35223;35224;35225 27928 27928 1 APTIQTQAQR Unmodified 1112.5938 0.5938206 3366 Q8N7H5 PAF1 RNA polymerase II-associated factor 1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 20.325 20.594 2 5.0268E-05 21152 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 144.12 127.58 131800000 0 0 0 10740000 0 12578000 0 0 0 15673000 0 23895000 29365000 18945000 20605000 4027 3366 3627 35226;35227;35228;35229;35230;35231;35232;35233;35234;35235;35236 27929;27930;27931;27932;27933;27934;27935;27936;27937;27938;27939 27930 11 APTIQTQAQREDGHRPNSHR Unmodified 2298.1326 0.13258595 3366 Q8N7H5 PAF1 RNA polymerase II-associated factor 1 homolog yes yes 0 0 2 By MS/MS 10 0 1 1 14.392 14.827 4 0.0023363 13614 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.969 22.715 7908600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7908600 4028 3366 3628 35237 27940 27940 1 APTISER Unmodified 772.40792 0.40791731 684 O95747 OXSR1 Serine/threonine-protein kinase OSR1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 14.778 14.98 2 0.046732 14683 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 65.777 22.711 184700000 0 0 0 15936000 0 23439000 0 13100000 0 25843000 33369000 26399000 23609000 23003000 0 4029 684 3629 35238;35239;35240;35241;35242;35243;35244;35245 27941 27941 1 APTNIVYK Unmodified 904.50182 0.5018177 1030 P15927 RPA2 Replication protein A 32 kDa subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32.762 31.903 2 0.0059094 34980 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 105.04 46.873 1239200000 24310000 816180000 15045000 16513000 0 40520000 25508000 23116000 13725000 48271000 46900000 49095000 31286000 31191000 57514000 4030 1030 3630 35246;35247;35248;35249;35250;35251;35252;35253;35254;35255;35256;35257;35258;35259 27942;27943;27944;27945;27946;27947;27948;27949;27950;27951;27952 27944 11 APTTVEDRVGDSTPVSEK Unmodified 1886.9222 0.92215019 4458 Q9H8Y8 GORASP2 Golgi reassembly-stacking protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 39.104 38.496 3 1.9329E-06 49027 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.39 75.312 217340000 0 75788000 0 0 7794500 10906000 0 7522700 13951000 12340000 14974000 18169000 12476000 16521000 26900000 4031 4458 3631 35260;35261;35262;35263;35264;35265;35266;35267;35268;35269;35270;35271 27953;27954;27955;27956;27957;27958;27959 27953 7 APVAGTCYQAEWDDYVPK Unmodified 2068.92 0.9200417 1269 P30086 PEBP1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 80.446 79.642 2 5.22E-257 91898 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 242.79 232.14 271960000 0 35576000 0 0 0 0 0 0 0 0 29034000 33742000 0 22588000 151020000 4032 1269 3632 35272;35273;35274;35275;35276 27960;27961;27962;27963;27964 27961 5 APVEHVVADAGAFLR Unmodified 1550.8205 0.82052608 5010 Q9ULX3 NOB1 RNA-binding protein NOB1 yes yes 0 0 0 By MS/MS 10 0 1 1 76.868 77.154 3 0.033781 88661 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 27.85 14.714 13449000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13449000 4033 5010 3633 35277 27965 27965 1 APVGPVTMGLPLPMDPK 2 Oxidation (M) 1750.8998 0.89976395 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.249 78.307 2 4.1407E-19 89662 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 102.4 87.028 106810000 0 0 0 7633600 7741300 8897200 11322000 5713300 8913000 9443100 8653400 12038000 8907600 8279900 9267000 4034 5262 3634 35278;35279;35280;35281;35282;35283;35284;35285;35286;35287;35288;35289 27966;27967;27968;27969;27970;27971;27972;27973;27974;27975;27976;27977;27978;27979 27974 6663;6664 14 APVGPVTMGLPLPMDPK Oxidation (M) 1734.9048 0.90484933 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 1 0 By MS/MS 10 0 1 1 85.026 85.205 2 4.8439E-07 98427 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.182 67.643 5633900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5633900 4035 5262 3634 35290 27980 27980 6663;6664 1 APVGPVTMGLPLPMDPK Unmodified 1718.9099 0.90993471 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 90.444 90.582 2 0.003722 104958 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.569 45.682 7849900 0 0 0 0 0 0 0 1641300 0 1814000 0 0 0 937590 3457100 4036 5262 3634 35291;35292;35293;35294 27981 27981 1 APVGSVVSVPSQSSASSDK Unmodified 1787.8901 0.89012178 1691 P52594 AGFG1 Arf-GAP domain and FG repeat-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 6 4.04 1 1 1 3 1 2 1 1 1 62.112 61.205 2;3 2.4686E-102 61412 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 197.19 174.71 65169000 6610800 26444000 0 0 0 0 0 9432700 0 0 0 0 0 0 22682000 4037 1691 3635 35295;35296;35297;35298;35299;35300 27982;27983;27984;27985 27982 2 APVLAAPPVTVK Unmodified 1161.7121 0.71214483 457 O75128 COBL Protein cordon-bleu yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.452 67.534 2 0.0057958 76610 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.124 41.355 167930000 0 0 0 10474000 10731000 14350000 11502000 13135000 8606600 17221000 17115000 19862000 14124000 12130000 18682000 4038 457 3636 35301;35302;35303;35304;35305;35306;35307;35308;35309;35310;35311;35312 27986;27987;27988;27989;27990;27991;27992;27993;27994;27995;27996 27988 11 APVNGTEQTQK Unmodified 1171.5833 0.5833155 2136 Q07157 TJP1 Tight junction protein ZO-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 7.2571 7.3571 2 0.00060831 5376 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 95.502 69.943 33685000 0 0 0 3849400 2684900 3645200 3090100 1890400 0 2873500 0 4893800 3004700 2848100 4904600 4039 2136 3637 35313;35314;35315;35316;35317;35318;35319;35320;35321;35322;35323 27997;27998;27999;28000 27997 3 APVNTAELTDLLIQQNHIGSVIK Unmodified 2473.354 0.35403784 4810 Q9P287 BCCIP BRCA2 and CDKN1A-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 96.995 91.864 3 4.3172E-100 115159 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 180.66 163.94 121350000 76020000 44871000 461020 0 0 0 0 0 0 0 0 0 0 0 0 4040 4810 3638 35324;35325;35326 28001;28002 28002 1 APVPASELLASGVLSR Unmodified 1565.8777 0.8777066 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 2 2 1 2 2 1 1 2 1 1 85.217 85.245 2;3 1.5989E-06 98644 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 83.617 69.711 85093000 0 0 0 8665500 13042000 3421700 10076000 10036000 4615300 0 4259400 17736000 8097200 5144100 0 4041 2501 3639 35327;35328;35329;35330;35331;35332;35333;35334;35335;35336;35337;35338;35339;35340;35341 28003;28004;28005;28006;28007;28008;28009;28010 28004 6 APVPEPGLDLSLSPRPDSPQPR Unmodified 2324.2125 0.21245898 3473 Q8TAP8 PPP1R35 Protein phosphatase 1 regulatory subunit 35 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.187 78.294 3 1.536E-13 89685 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 75.358 66.539 152080000 0 0 0 0 7838800 12695000 8816600 10804000 11467000 19063000 16797000 17600000 10790000 11180000 25028000 4042 3473 3640 35342;35343;35344;35345;35346;35347;35348;35349;35350;35351;35352;35353 28011;28012;28013;28014;28015;28016;28017;28018;28019;28020;28021;28022;28023 28018 13 APVPGTPDSLSSGSSR Unmodified 1513.7372 0.73724996 4951 Q9UJZ1 STOML2 Stomatin-like protein 2, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.274 43.451 2 1.3815E-19 48651 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 109.24 105.19 118720000 0 0 0 7592200 5073000 9412900 6099100 6198000 0 12891000 18980000 20060000 10654000 7340600 14422000 4043 4951 3641 35354;35355;35356;35357;35358;35359;35360;35361;35362;35363;35364;35365 28024;28025;28026;28027;28028;28029;28030;28031;28032;28033;28034;28035;28036 28026 13 APVPSTCSSTFPEELSPPSHQAK Unmodified 2453.1533 0.15328912 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 66.451 66.028 3 2.5369E-20 75543 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 67.866 65.711 137780000 0 66366000 0 4701400 4567400 1725500 7028000 8077700 5682800 8559000 6594300 8920800 8426000 7132100 0 4044 2459 3642 35366;35367;35368;35369;35370;35371;35372;35373;35374;35375;35376;35377 28037;28038;28039;28040;28041;28042;28043;28044;28045;28046;28047;28048;28049;28050 28043 13 APVPTGEVYFADSFDR Unmodified 1769.8261 0.82606496 1227 P27824 CANX Calnexin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.066 82.127 2 1.6389E-20 95005 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 112.86 106.42 90442000 0 0 0 1910900 6436200 7357800 3021200 7286700 8102300 12239000 8611200 11355000 5147100 6097400 12878000 4045 1227 3643 35378;35379;35380;35381;35382;35383;35384;35385;35386;35387;35388;35389 28051;28052;28053;28054;28055;28056;28057;28058;28059;28060;28061;28062;28063 28052 13 APVQPQQSPAAAPGGTDEK Unmodified 1847.9014 0.90135517 2252 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.7 2.91 4 1 25 1 3 1 2 2 2 2 2 2 3 2 2 2 2 2 31.115 30.499 2;3 8.196E-54 33106 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 188.92 178.73 1386500000 27364000 38658000 727260 83026000 88147000 139170000 45081000 41502000 45255000 169800000 181080000 287450000 47812000 79604000 111830000 4046 2252 3644 35390;35391;35392;35393;35394;35395;35396;35397;35398;35399;35400;35401;35402;35403;35404;35405;35406;35407;35408;35409;35410;35411;35412;35413;35414;35415;35416;35417;35418;35419 28064;28065;28066;28067;28068;28069;28070;28071;28072;28073;28074;28075;28076;28077;28078;28079;28080;28081;28082;28083;28084;28085;28086 28081 21 APVQPQQSPAAAPGGTDEKPSGK Unmodified 2217.1026 0.10257418 2252 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 29.613 28.931 3 4.2644E-76 31837 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 136.02 131.75 378470000 0 40648000 0 30278000 30637000 0 18066000 18790000 0 45555000 50329000 102340000 20818000 21009000 0 4047 2252 3645 35420;35421;35422;35423;35424;35425;35426;35427;35428;35429;35430;35431;35432 28087;28088;28089;28090;28091;28092;28093;28094;28095;28096;28097;28098;28099;28100;28101 28098 15 APVQVIHR Unmodified 918.53993 0.53993454 4111 Q9BRP4 PAAF1 Proteasomal ATPase-associated factor 1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 21.861 22.356 2 0.038617 22384 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.966 28.075 18099000 0 0 0 0 0 0 0 0 0 1997100 4079900 5700200 0 0 6322100 4048 4111 3646 35433;35434;35435;35436 28102 28102 1 APVSALPLAPNHLGGGAVVLGAESHASK Unmodified 2619.4133 0.41328405 2251 Q13190 STX5 Syntaxin-5 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 79.07 79.242 4 0.017114 91237 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 17.862 10.75 18366000 0 0 0 0 0 0 0 0 0 4799900 0 0 0 0 13566000 4049 2251 3647 35437;35438 28103 28103 1 APVSSTESVIQSNTPTPPPSQPLNETAEEESR Unmodified 3378.6063 0.60630195 4505 Q9HC35 EML4 Echinoderm microtubule-associated protein-like 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 72.603 72.79 3 2.6077E-47 83417 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.261 80.166 55583000 0 0 0 0 0 0 7072300 0 0 8197800 9756400 0 7298300 8819900 14438000 4050 4505 3648 35439;35440;35441;35442;35443;35444;35445;35446 28104;28105;28106;28107;28108;28109;28110;28111;28112;28113 28108 10 APVSYPNTLPESFTK Unmodified 1649.8301 0.83008771 3580 Q8WX92 NELFB Negative elongation factor B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 75.689 74.55 2 1.3759E-40 92135 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 166.24 149.98 1108800000 16320000 461850000 5083700 30943000 33168000 52153000 43776000 42475000 39603000 71967000 65597000 57022000 44170000 54143000 90567000 4051 3580 3649 35447;35448;35449;35450;35451;35452;35453;35454;35455;35456;35457;35458;35459;35460;35461;35462 28114;28115;28116;28117;28118;28119;28120;28121;28122;28123;28124;28125;28126;28127;28128;28129;28130;28131;28132;28133 28118 20 APVTGYVR Unmodified 861.47085 0.47085192 4800 Q9P0W2 HMG20B SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 28.715 28.915 2 0.01743 31282 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 65.676 45.89 165530000 0 0 0 6335700 12316000 17188000 14344000 11636000 0 13693000 21418000 22889000 12442000 12243000 21027000 4052 4800 3650 35463;35464;35465;35466;35467;35468;35469;35470;35471;35472;35473 28134;28135;28136;28137 28135 4 APVTVTSLPAGVR Unmodified 1266.7296 0.7295858 1663 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.933 65.021 2 6.0777E-07 74444 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 111.65 75.708 150370000 0 0 0 10061000 7321200 10919000 11251000 11982000 8570800 12248000 17297000 18765000 11297000 13398000 17262000 4053 1663 3651 35474;35475;35476;35477;35478;35479;35480;35481;35482;35483;35484;35485 28138;28139;28140;28141;28142;28143;28144;28145;28146;28147;28148;28149 28138 12 APVVAIAVLDGR Unmodified 1179.6976 0.69755739 2517 Q15334 LLGL1 Lethal(2) giant larvae protein homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.292 81.352 2 0.00018423 93727 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.48 87.124 81476000 0 0 0 3456200 4558100 9084100 4649900 4554700 4772200 8750000 5463100 10629000 7186100 6998500 11374000 4054 2517 3652 35486;35487;35488;35489;35490;35491;35492;35493;35494;35495;35496;35497 28150;28151;28152;28153;28154;28155;28156;28157;28158;28159;28160;28161 28153 12 APVYMPHPETPSK Unmodified 1452.7071 0.7071358 4801 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 52.349 46.425 3 0.0013517 61094 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.809 55.854 53852000 20331000 29847000 3672900 0 0 0 0 0 0 0 0 0 0 0 0 4055 4801 3653 35498;35499;35500 28162;28163;28164 28163 2 APWELLELR Unmodified 1125.6182 0.61824444 1740 P54577 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 88.632 88.757 2 0.0031256 102662 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 103.56 76.433 17612000 0 0 0 0 0 2381900 0 0 0 0 1412300 0 0 1545700 12272000 4056 1740 3654 35501;35502;35503;35504 28165;28166 28166 2 APYFSGSSTFSPTILSSDK Unmodified 1990.9524 0.95238769 3101 Q7Z4S6 KIF21A Kinesin-like protein KIF21A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 83.06 83.165 2 4.2601E-47 96486 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 161.76 151.15 118120000 0 0 0 0 6900700 13024000 6138000 9641100 9683100 11978000 11169000 14563000 6816800 10017000 18194000 4057 3101 3655 35505;35506;35507;35508;35509;35510;35511;35512;35513;35514;35515;35516 28167;28168;28169;28170;28171;28172;28173;28174;28175;28176;28177;28178 28176 12 APYSPTTSK Unmodified 950.47091 0.4709115 3893 Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.462 14.624 2 0.0059097 14214 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 76.478 36.374 76525000 0 0 0 3840000 4639100 6626200 4754300 3691200 4521900 8441000 7653400 7200900 7155800 7895400 10106000 4058 3893 3656 35517;35518;35519;35520;35521;35522;35523;35524;35525;35526;35527;35528 28179;28180 28179 2 APYVGMVTK Unmodified 964.50519 0.50518852 4779 Q9NZN8 CNOT2 CCR4-NOT transcription complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 44.774 44.959 2 0.011037 49360 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 63.419 41.491 101590000 0 0 0 5241000 5879100 8031900 0 7031900 0 9602800 13018000 11913000 13786000 8823600 18258000 4059 4779 3657 35529;35530;35531;35532;35533;35534;35535;35536;35537;35538;35539 28181;28182;28183;28184;28185;28186;28187 28185 7 AQAAAPASVPAQAPK Unmodified 1376.7412 0.74121312 1529 P47914 RPL29 60S ribosomal protein L29 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.34 1 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 40.744 40.467 2 6.3448E-19 39242 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 108.53 88.495 1295000000 46611000 18012000 0 67812000 72323000 71275000 72248000 70715000 64796000 105490000 110810000 168590000 149110000 126560000 150610000 4060 1529 3658 35540;35541;35542;35543;35544;35545;35546;35547;35548;35549;35550;35551;35552;35553;35554 28188;28189;28190;28191;28192;28193;28194;28195;28196;28197;28198;28199;28200;28201;28202;28203;28204;28205 28198 18 AQAAEPNRGGPGGR Unmodified 1336.6596 0.65960876 5287 Q9Y6J9 TAF6L TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 6.7655 6.8691 3 0.027649 4732 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 30.484 27.261 54390000 0 0 0 3045600 4179400 5698800 5056000 4637300 5806800 6694500 0 0 5864000 7174700 6232900 4061 5287 3659 35555;35556;35557;35558;35559;35560;35561;35562;35563;35564 28206 28206 1 AQAAFFGSYR Unmodified 1116.5352 0.53524309 3516 Q8TEH3 DENND1A DENN domain-containing protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 58.854 59.055 2 0.0056999 66619 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 67.897 49.519 84227000 0 0 0 0 5226000 0 5678300 8504400 5445400 9533500 6692700 10037000 11745000 11482000 9883300 4062 3516 3660 35565;35566;35567;35568;35569;35570;35571;35572;35573;35574 28207;28208;28209;28210;28211;28212;28213;28214 28213 8 AQAAGSSVLR Unmodified 958.51959 0.51959303 3816 Q96EK9 KTI12 Protein KTI12 homolog yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 20.164 20.398 2 0.010197 19710 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.432 8.8572 96769000 0 0 0 0 5375600 14657000 7049000 5482000 6626700 11317000 10688000 11190000 7983300 6064900 10335000 4063 3816 3661 35575;35576;35577;35578;35579;35580;35581;35582;35583;35584;35585 28215;28216;28217;28218;28219 28215 5 AQAALQAQQVNR Unmodified 1296.6898 0.68984626 1607 P49848 TAF6 Transcription initiation factor TFIID subunit 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 25.206 25.363 2 0.0064837 26960 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 66.27 54.423 2786500 0 0 0 0 0 0 0 0 0 2786500 0 0 0 0 0 4064 1607 3662 35586;35587;35588;35589 28220;28221;28222;28223 28220 4 AQADLALEK Unmodified 957.51311 0.51311067 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 33.21 33.341 2 0.021061 36387 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 52.591 23.215 5343000 0 0 0 0 0 0 0 0 5343000 0 0 0 0 0 0 4065 2459 3663 35590;35591;35592;35593 28224;28225;28226;28227 28226 4 AQAEALALQASLRK Unmodified 1468.8362 0.83617614 5273 Q9Y6A5 TACC3 Transforming acidic coiled-coil-containing protein 3 yes yes 0 0 1 By MS/MS 2 0 1 1 68.255 59.961 3 0.010693 80177 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 41.577 22.334 16922000 16922000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4066 5273 3664 35594 28228 28228 1 AQAELENVSGALNEAESK Unmodified 1858.8909 0.89085007 3090 Q7Z406 MYH14 Myosin-14 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 68.607 68.365 2 2.234E-05 79090 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 88.087 75.921 8525300 0 0 0 5604200 0 0 0 2921100 0 0 0 0 0 0 0 4067 3090 3665 35595;35596 28229;28230 28230 2 AQAELNALK Unmodified 956.5291 0.52909508 4063 Q99816 TSG101 Tumor susceptibility gene 101 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 35.153 35.404 2 0.031671 37753 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.657 24.615 63109000 0 0 0 0 3091900 6073600 5062300 5532300 0 7188400 6936200 6901400 5597400 6422300 10303000 4068 4063 3666 35597;35598;35599;35600;35601;35602;35603;35604;35605;35606 28231;28232 28231 2 AQAELQELLTIAERWEEK Unmodified 2156.1113 0.11134795 1436 P41229 KDM5C Lysine-specific demethylase 5C yes yes 0 0 1 By MS/MS 2 0 1 1 100.49 92.359 3 0.0012435 119015 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.773 37.022 11940000 11940000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4069 1436 3667 35607 28233 28233 1 AQAEQAALR Unmodified 956.50394 0.50394296 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.873 15.044 2 0.0041488 14568 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 113.71 71.108 82612000 0 0 0 11318000 4667600 3713000 6615500 5138300 4040700 6892200 9675400 8565700 7801800 7026300 7156900 4070 2501 3668 35608;35609;35610;35611;35612;35613;35614;35615;35616;35617;35618;35619 28234;28235;28236;28237;28238;28239;28240;28241;28242;28243;28244 28242 11 AQAEQEEQERLQK Unmodified 1585.7696 0.76961272 2667 Q3KQU3 MAP7D1 MAP7 domain-containing protein 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 16.154 15.733 3 0.017321 20874 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 53.947 44.897 69506000 0 16693000 0 3791800 2551900 1779000 3887900 0 3838900 5165500 5375600 6902100 4690200 3771700 11059000 4071 2667 3669 35620;35621;35622;35623;35624;35625;35626;35627;35628;35629;35630;35631;35632 28245;28246 28245 0 AQAEQQHNPAANPTMIR Unmodified 1875.901 0.90097802 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 34.557 34.729 3 6.9844E-10 38161 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 86.455 77.636 122940000 0 0 0 6241600 8619000 0 8797400 13564000 6092600 15926000 0 16176000 12274000 12960000 22288000 4072 19 3670 35633;35634;35635;35636;35637;35638;35639;35640;35641;35642 28247;28248;28249;28250;28251;28252;28253;28254;28255;28256;28257 28252 11 AQAEVEGLGK Unmodified 1000.5189 0.51892433 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 26.685 26.727 2 0.0027296 28922 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 80.684 54.512 64783000 0 0 0 15149000 10350000 11881000 0 9944600 0 0 0 0 10054000 7404800 0 4073 2501 3671 35643;35644;35645;35646;35647;35648;35649 28258;28259;28260;28261;28262;28263;28264 28258 7 AQAGEGVRPSPMQLELR Unmodified 1837.9469 0.94686558 181 O00764 PDXK Pyridoxal kinase yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 63.743 63.927 3 0.0021639 72314 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.768 49.339 101410000 0 0 0 0 1499500 0 1900500 0 1885800 4967300 13309000 14033000 0 12478000 51336000 4074 181 3672 35650;35651;35652;35653;35654;35655;35656;35657 28265 28265 0 AQAGELWVKNEK Unmodified 1371.7147 0.71466402 459 O75140 DEPDC5 DEP domain-containing protein 5 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 21.235 21.523 3 0.038082 22428 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 23.118 3.1083 55461000 0 0 0 0 871670 0 6606800 0 0 8599000 15145000 8529600 7416200 0 8292300 4075 459 3673 35658;35659;35660;35661;35662;35663;35664 28266 28266 1 AQAIFLGNK Unmodified 960.53927 0.53926584 2901 Q6NW34 C3orf17 Uncharacterized protein C3orf17 yes yes 0 0 0 By MS/MS 2 0 1 1 56.142 47.995 2 0.060614 65714 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.787 40.364 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4076 2901 3674 35665 28267 28267 1 AQALAIETEAELQRVQK Unmodified 1897.0269 0.026890038 2444 Q14764 MVP Major vault protein yes yes 0 0 1 By MS/MS By matching By MS/MS 2 0 3 1 1 1 77.577 72.355 3 2.8708E-13 92877 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.38 103.43 69926000 23296000 36707000 9923800 0 0 0 0 0 0 0 0 0 0 0 0 4077 2444 3675 35666;35667;35668 28268;28269;28270 28268 3 AQALEDLAGFK Unmodified 1161.603 0.60298831 1492 P46013 MKI67 Antigen KI-67 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 74.032 72.873 2 0.016419 91249 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 61.65 48.383 531060000 11289000 202740000 0 31092000 35086000 31524000 31821000 28734000 28040000 0 0 0 29710000 42026000 59003000 4078 1492 3676 35669;35670;35671;35672;35673;35674;35675;35676;35677;35678;35679 28271;28272;28273;28274 28271 4 AQALRDNSTMGYMAAK 2 Oxidation (M) 1758.8029 0.80290346 850 P07900 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 0 2 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.71 5 11 2 1 2 1 1 2 1 1 1 1 1 1 1 24.752 23.376 2;3 2.693E-07 21998 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 84.508 79.832 1883700000 1011800000 130580000 307110000 0 21339000 58637000 75254000 0 48247000 1766000 90596000 0 48718000 39507000 50200000 4079 850 3677 35680;35681;35682;35683;35684;35685;35686;35687;35688;35689;35690;35691;35692;35693;35694;35695 28275;28276;28277;28278;28279;28280;28281;28282;28283 28280 1066;1067 6 AQALRDNSTMGYMAAK Unmodified 1726.8131 0.81307421 850 P07900 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.43 3.14 5 1 24 3 1 2 2 2 2 2 2 2 2 2 2 2 2 2 43.549 42.479 2;3 9.5796E-11 58663 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.01 70.066 4841400000 3422800000 7456500 130030000 32412000 33024000 90246000 53771000 70806000 40662000 110620000 193650000 123240000 76933000 119660000 336130000 4080 850 3677 35696;35697;35698;35699;35700;35701;35702;35703;35704;35705;35706;35707;35708;35709;35710;35711;35712;35713;35714;35715;35716;35717;35718;35719;35720;35721;35722;35723;35724;35725 28284;28285;28286;28287;28288;28289;28290;28291;28292;28293;28294;28295;28296;28297;28298;28299;28300;28301;28302;28303 28291 20 AQALRDNSTMGYMAAK Oxidation (M) 1742.808 0.80798883 850 P07900 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 8.08 3.42 6 19 4 1 1 1 1 1 2 2 2 2 1 2 3 1 1 32.625 31.636 2;3 0.0001599 44366 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.932 81.203 3170100000 2421700000 259100000 171130000 2061200 1950400 4786100 35262000 42137000 32196000 58508000 8159200 50374000 65651000 5364900 11742000 4081 850 3677 35726;35727;35728;35729;35730;35731;35732;35733;35734;35735;35736;35737;35738;35739;35740;35741;35742;35743;35744;35745;35746;35747;35748;35749;35750 28304;28305;28306;28307;28308;28309;28310;28311;28312;28313;28314;28315;28316;28317;28318 28312 1066;1067 10 AQALRDNSTMGYMMAK 2 Oxidation (M) 1818.8063 0.80627428 862 P08238;Q58FF7 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 0 2 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.9 3.9 12 19 5 3 4 1 3 2 1 2 1 1 3 1 1 3 33.957 32.064 2;3 0.00014323 35393 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 67.102 58.925 1587100000 911970000 110170000 114690000 13653000 35348000 50466000 33911000 40417000 17202000 21327000 95855000 44102000 32883000 65114000 0 4082 862 3678 35751;35752;35753;35754;35755;35756;35757;35758;35759;35760;35761;35762;35763;35764;35765;35766;35767;35768;35769;35770;35771;35772;35773;35774;35775;35776;35777;35778;35779;35780;35781 28319;28320;28321;28322;28323;28324;28325;28326;28327;28328;28329;28330;28331;28332;28333;28334;28335;28336;28337;28338 28319 1094;1095;1096 13 AQALRDNSTMGYMMAK Oxidation (M) 1802.8114 0.81135965 862 P08238;Q58FF7 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.74 3.93 11 16 7 1 3 2 1 2 1 1 2 1 1 1 2 2 44.428 42.249 3 0.00016231 59299 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.615 71.832 2664700000 1655500000 112880000 155490000 54024000 12424000 81814000 48332000 0 15887000 97951000 55235000 38457000 46539000 71422000 218680000 4083 862 3678 35782;35783;35784;35785;35786;35787;35788;35789;35790;35791;35792;35793;35794;35795;35796;35797;35798;35799;35800;35801;35802;35803;35804;35805;35806;35807;35808 28339;28340;28341;28342;28343;28344;28345;28346;28347;28348;28349;28350;28351;28352;28353;28354;28355;28356;28357;28358;28359;28360;28361;28362;28363;28364 28346 1094;1095;1096 22 AQALRDNSTMGYMMAK Unmodified 1786.8164 0.81644503 862 P08238;Q58FF7 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.08 2.56 3 23 1 1 1 1 2 2 2 2 2 2 2 2 2 2 2 52.616 52.087 2;3 1.9935E-18 58269 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 123.84 100.09 2983100000 1619400000 87636000 27389000 26405000 20227000 65033000 37562000 71616000 36512000 96171000 141890000 89414000 71972000 152320000 439500000 4084 862 3678 35809;35810;35811;35812;35813;35814;35815;35816;35817;35818;35819;35820;35821;35822;35823;35824;35825;35826;35827;35828;35829;35830;35831;35832;35833;35834 28365;28366;28367;28368;28369;28370;28371;28372;28373;28374;28375;28376;28377;28378;28379;28380;28381;28382;28383;28384;28385 28375 21 AQALRDNSTMGYMMAK 3 Oxidation (M) 1834.8012 0.8011889 862 P08238;Q58FF7 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 0 3 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 22.32 21.766 3 0.00030173 22045 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 53.828 50.65 556260000 299460000 75096 0 32351000 16697000 0 0 24526000 0 0 85143000 0 72648000 25360000 0 4085 862 3678 35835;35836;35837;35838;35839;35840;35841;35842 28386;28387;28388;28389;28390;28391;28392 28387 1094;1095;1096 6 AQALSEEEFQR Acetyl (Protein N-term) 1348.6259 0.62590859 2689 Q4V328 GRIPAP1 GRIP1-associated protein 1 yes yes 1 0 0 By matching By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 68.289 68.566 2 9.6088E-05 78092 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.108 78.515 28916000 0 0 0 0 0 0 7293800 0 0 0 0 0 0 10153000 11469000 4086 2689 3679 35843;35844;35845;35846 28393;28394 28393 2 AQAQSILEVLK Unmodified 1198.6921 0.69213767 297 O43149 ZZEF1 Zinc finger ZZ-type and EF-hand domain-containing protein 1 yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By MS/MS 7.86 3.4 1 1 5 2 1 1 1 1 1 81.592 80.46 2 0.00045515 100963 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.4 78.954 64988000 0 51941000 0 782240 0 2301000 0 1453500 0 0 0 0 0 3426500 5083100 4087 297 3680 35847;35848;35849;35850;35851;35852;35853 28395;28396;28397 28395 3 AQASGSAHSTPNLGHPEDSGVSAPAPGK Unmodified 2626.2372 0.23717018 463 O75150 RNF40 E3 ubiquitin-protein ligase BRE1B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 2 1 1 2 1 2 2 1 2 1 2 2 38.788 38.987 3;4 3.46E-11 43759 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 48.759 41.137 294200000 0 0 0 16273000 8879200 16590000 21429000 15872000 13691000 24214000 32023000 45043000 27042000 25302000 47841000 4088 463 3681 35854;35855;35856;35857;35858;35859;35860;35861;35862;35863;35864;35865;35866;35867;35868;35869;35870;35871;35872 28398;28399;28400;28401;28402;28403;28404;28405;28406;28407;28408;28409;28410;28411;28412;28413;28414 28412 17 AQASSIPVGSR Unmodified 1071.5673 0.5672715 4006 Q99426 TBCB Tubulin-folding cofactor B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.623 26.823 2 0.014397 27419 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.598 15.931 99218000 0 0 0 4514500 3332300 9799400 5021200 6014800 2618500 9405800 10940000 16804000 5193800 7301900 18272000 4089 4006 3682 35873;35874;35875;35876;35877;35878;35879;35880;35881;35882;35883;35884 28415;28416;28417;28418 28416 3 AQATAQDPVFQK Unmodified 1302.6568 0.65681479 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.813 35.995 2 2.5886E-05 38638 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 100.48 77.737 44451000 0 0 0 3868100 2798000 3935400 2378300 2965300 3121500 4731500 3696200 5984800 3669200 3625300 3677600 4090 5189 3683 35885;35886;35887;35888;35889;35890;35891;35892;35893;35894;35895;35896 28419;28420;28421;28422;28423;28424;28425;28426;28427;28428;28429;28430 28426 12 AQAVLEEDHYGMEDVK Unmodified 1832.8251 0.82507869 1379 P36776 LONP1 Lon protease homolog, mitochondrial yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 54.74 54.801 3 0.034096 61482 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 26.771 19.363 14408000 0 0 0 0 1908200 4459500 0 0 0 0 0 0 0 0 8040700 4091 1379 3684 35897;35898;35899 28431 28431 1 AQAVLQQYQHLPSFR Unmodified 1784.9322 0.93220179 4924 Q9UID3 VPS51 Vacuolar protein sorting-associated protein 51 homolog yes yes 0 0 0 By MS/MS 10 0 1 1 73.594 73.933 3 0.042853 84774 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.313 29.534 8972700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8972700 4092 4924 3685 35900 28432 28432 0 AQAVSEDAGGNEGR Unmodified 1359.6015 0.60148476 1776 P55884 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 11.296 11.443 2 7.5862E-19 10173 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 151.15 146.99 467280000 0 0 0 18814000 18630000 27785000 23647000 30326000 23699000 33247000 35706000 70765000 50638000 53977000 80043000 4093 1776 3686 35901;35902;35903;35904;35905;35906;35907;35908;35909;35910;35911;35912 28433;28434;28435;28436;28437;28438;28439;28440;28441;28442;28443;28444;28445 28444 13 AQAVSEDAGGNEGRAAEAEPR Unmodified 2083.9519 0.95188719 1776 P55884 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 25.185 25.588 3 0.0031355 26126 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 31.753 25.631 12639000 0 0 0 0 0 0 0 0 4862200 0 0 0 0 0 7777100 4094 1776 3687 35913;35914 28446;28447 28446 2 AQAVSEEEEEEEGK Unmodified 1562.6584 0.65839051 4302 Q9GZR7 DDX24 ATP-dependent RNA helicase DDX24 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.29 18.483 2 0.00062623 18315 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 78.653 75.008 29022000 0 0 0 1842500 2480400 1919200 1612200 1888600 1841600 2848700 2250400 3417500 3226500 1958100 3736000 4095 4302 3688 35915;35916;35917;35918;35919;35920;35921;35922;35923;35924;35925;35926 28448;28449;28450;28451;28452;28453;28454;28455;28456;28457 28455 10 AQCEDDLAEK Unmodified 1177.4921 0.49211723 2191 Q12797 ASPH Aspartyl/asparaginyl beta-hydroxylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.466 15.636 2 0.0016385 15182 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 120.15 87.314 61443000 0 0 0 2599800 2618800 2952500 3642600 3234900 2583900 4555900 7036800 9337000 7158800 5910200 9811400 4096 2191 3689 35927;35928;35929;35930;35931;35932;35933;35934;35935;35936;35937;35938 28458;28459;28460;28461;28462;28463;28464;28465;28466 28465 9 AQCETLSPDGLPEEQPQTTK Unmodified 2228.0267 0.026691621 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 2 1 2 2 2 2 2 1 57.42 57.517 2;3 2.7604E-109 64857 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 181.26 163.75 128530000 0 0 0 0 13675000 9267100 16451000 14678000 0 0 13965000 0 8930200 24255000 27306000 4097 3119 3690 35939;35940;35941;35942;35943;35944;35945;35946;35947;35948;35949;35950;35951;35952 28467;28468;28469;28470;28471;28472;28473;28474 28469 8 AQCPIVER Unmodified 971.48585 0.48585006 1512 P46782 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 22.943 23.39 2 0.023266 24429 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 60.478 49.109 181730000 0 0 0 0 0 0 0 0 0 0 0 0 82992000 53183000 45554000 4098 1512 3691 35953;35954;35955;35956 28475;28476;28477;28478 28478 3 AQCYMDTEQYEEAVRDYEK Oxidation (M) 2442.9944 0.99440521 4035 Q99615 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 65.095 65.254 3 5.195E-12 74166 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.42 85.42 87663000 0 0 0 0 3346700 6355300 0 6377900 0 12807000 9371800 10156000 6897800 14565000 17786000 4099 4035 3692 35957;35958;35959;35960;35961;35962;35963;35964;35965 28479;28480;28481;28482;28483;28484;28485;28486 28481 5540 8 AQCYMDTEQYEEAVRDYEK Unmodified 2426.9995 0.99949059 4035 Q99615 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 0 0 1 By MS/MS 10 0 1 1 73.566 73.905 3 2.2879E-25 84611 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 104.61 101.4 18308000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18308000 4100 4035 3692 35966 28487 28487 1 AQDAPLSLLQTQGGRK Unmodified 1681.9111 0.911132 1549 P48681 NES Nestin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 65.065 65.219 3 0.017932 74551 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 26.474 16.417 44328000 0 0 0 0 2106600 3494700 3528200 4380100 3382000 4663200 6629900 9939300 0 0 6203500 4101 1549 3693 35967;35968;35969;35970;35971;35972;35973;35974;35975 28488;28489 28488 2 AQDCYFMK Unmodified 1061.431 0.4310373 320 O43353 RIPK2 Receptor-interacting serine/threonine-protein kinase 2 yes yes 0 0 0 By MS/MS 2 0 1 1 45.623 40.302 2 0.028278 52327 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.741 66.372 16163000 0 16163000 0 0 0 0 0 0 0 0 0 0 0 0 0 4102 320 3694 35976 28490 28490 1 AQDDLTLR Unmodified 930.47706 0.47705951 3542 Q8WUF5 PPP1R13L RelA-associated inhibitor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 33.327 33.524 2 0.0068825 36465 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 92.47 10.23 392910000 0 0 0 0 27989000 0 38312000 29265000 30656000 65268000 82396000 58589000 0 60440000 0 4103 3542 3695 35977;35978;35979;35980;35981;35982;35983;35984 28491;28492;28493;28494 28491 4 AQDEGLLSDVVPFK Unmodified 1516.7773 0.77732386 1757 P55084 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 88.335 87.665 2 0.00056161 108954 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.094 78.87 134010000 0 108800000 1322700 0 2041400 2329400 852200 1273900 1948600 2308600 3073300 2575500 875460 1685700 4915100 4104 1757 3696 35985;35986;35987;35988;35989;35990;35991;35992;35993;35994;35995;35996;35997;35998 28495;28496;28497 28496 3 AQDGSHPLSLQDLIEK Unmodified 1749.8897 0.88972785 614 O94979 SEC31A Protein transport protein Sec31A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.24 3.75 5 1 11 2 3 1 1 1 1 1 1 1 1 1 1 1 1 80.906 79.084 2;3 3.0474E-23 99619 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 148.57 91.224 647020000 25884000 428140000 15915000 3864000 3241300 18082000 0 12137000 12133000 12924000 14588000 18733000 8346600 13854000 59176000 4105 614 3697 35999;36000;36001;36002;36003;36004;36005;36006;36007;36008;36009;36010;36011;36012;36013;36014;36015 28498;28499;28500;28501;28502;28503;28504;28505;28506;28507;28508 28501 10 AQDIEAGDGTTSVVIIAGSLLDSCTK Unmodified 2620.2902 0.29017653 1642 P50991 CCT4 T-complex protein 1 subunit delta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.5 0.5 3 3 2 3 1 97.967 93.726 2;3 2.6605E-126 113151 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 160.67 154.31 261930000 84263000 156900000 20768000 0 0 0 0 0 0 0 0 0 0 0 0 4106 1642 3698 36016;36017;36018;36019;36020;36021 28509;28510;28511;28512;28513;28514;28515 28511 7 AQDIQCGLQSR Unmodified 1274.6037 0.60373336 3561 Q8WVJ2 NUDCD2 NudC domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.06 29.345 2 0.00031901 31254 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 109.42 69.361 107610000 0 0 0 0 3156900 11885000 0 0 0 14133000 10330000 10393000 10213000 8708900 38789000 4107 3561 3699 36022;36023;36024;36025;36026;36027;36028;36029;36030;36031;36032;36033 28516;28517;28518;28519;28520;28521;28522;28523;28524;28525;28526;28527 28521 12 AQDLEAAQALAQSERK Unmodified 1727.8802 0.8802258 5006 Q9ULV0 MYO5B Unconventional myosin-Vb yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 8 1 1 1 1 1 1 1 1 52.494 52.543 3 0.00094825 60159 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 46.249 40.167 28825000 0 0 0 4726700 6304000 0 0 3786900 2784800 0 0 5327400 2643900 3251400 0 4108 5006 3700 36034;36035;36036;36037;36038;36039;36040;36041 28528;28529;28530 28530 3 AQDLFLDGVPLRK Unmodified 1470.8195 0.81946344 2838 Q63HN8 RNF213 E3 ubiquitin-protein ligase RNF213 yes yes 0 0 1 By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 76.459 76.61 3 0.0039461 87942 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.424 26.738 52175000 0 0 0 0 0 8344600 0 3806400 2887300 4164600 3712900 7664300 3000400 4817500 13777000 4109 2838 3701 36042;36043;36044;36045;36046;36047;36048;36049;36050 28531;28532;28533;28534;28535 28532 5 AQDLSNLENTVAALK Unmodified 1585.8312 0.83115034 4559 Q9NQ48 LZTFL1 Leucine zipper transcription factor-like protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 85.909 81.887 2 0.0037553 101745 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.04 86.131 234270000 0 234270000 0 0 0 0 0 0 0 0 0 0 0 0 0 4110 4559 3702 36051;36052 28536 28536 0 AQDPAAATASSPSTPDPASAPSTTPASPATPAQPSTSGSASSDAGSGSR Unmodified 4409.9967 0.9967313 4609 Q9NRR5 UBQLN4 Ubiquilin-4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 57.915 58.295 4 3.4415E-52 66117 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 58.198 57.06 68741000 0 0 0 0 0 0 0 0 0 10502000 13623000 14431000 19927000 0 10259000 4111 4609 3703 36053;36054;36055;36056;36057 28537;28538;28539;28540;28541;28542 28542 6 AQDPSSAGCDQIHGAFAK Unmodified 1858.8268 0.82681002 2800 Q5THK1 PRR14L Protein PRR14L yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 45.156 40.093 3 0.0016576 49795 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 50.079 44.537 22291000 0 22291000 0 0 0 0 0 0 0 0 0 0 0 0 0 4112 2800 3704 36058;36059 28543 28543 0 AQDSVLRTEK Unmodified 1145.6041 0.60405094 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 15.604 15.219 3 0.0025849 19317 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 97.456 70.783 465490000 0 144050000 55859000 12628000 12546000 22966000 27810000 18161000 18065000 33670000 44065000 39062000 0 36603000 0 4113 4634 3705 36060;36061;36062;36063;36064;36065;36066;36067;36068;36069;36070;36071 28544;28545;28546;28547;28548;28549;28550;28551;28552 28549 7 AQDVLVQEMEVVK Unmodified 1486.7701 0.77012999 4010 Q99459 CDC5L Cell division cycle 5-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 78.699 78.179 2 7.4062E-09 97000 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.37 113.06 398510000 0 259780000 0 5596600 7299600 11017000 7883600 7771800 7982900 17194000 14270000 18245000 10290000 7879000 23296000 4114 4010 3706 36072;36073;36074;36075;36076;36077;36078;36079;36080;36081;36082;36083;36084;36085 28553;28554;28555;28556;28557;28558;28559;28560;28561 28555 8 AQDVLVQEMEVVK Oxidation (M) 1502.765 0.76504461 4010 Q99459 CDC5L Cell division cycle 5-like protein yes yes 0 1 0 By MS/MS 2 0 1 1 63.967 58.059 2 0.00047234 74384 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.767 77.294 28627000 0 28627000 0 0 0 0 0 0 0 0 0 0 0 0 0 4115 4010 3706 36086 28562 28562 5495 1 AQEAAATQLGLK Unmodified 1199.651 0.65100113 1619 P50336 PPOX Protoporphyrinogen oxidase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 43.24 43.275 2 0.00015498 49036 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 110.14 47.936 50614000 0 0 0 4849000 6188000 0 8549400 8500400 0 0 7514800 0 8180900 6831600 0 4116 1619 3707 36087;36088;36089;36090;36091;36092;36093 28563;28564;28565;28566;28567;28568 28568 6 AQEACGPLEMDSALSVVQNLEK Oxidation (M) 2404.125 0.12502546 5187 Q9Y490 TLN1 Talin-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.8 3.92 2 3 1 1 1 1 1 88.389 86.996 3 1.7161E-07 100920 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 56.247 51.154 86588000 0 73004000 1453900 0 0 0 0 0 2088300 7666000 0 0 0 2376400 0 4117 5187 3708 36094;36095;36096;36097;36098 28569;28570;28571 28569 6559 3 AQEACGPLEMDSALSVVQNLEK Unmodified 2388.1301 0.13011083 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By MS/MS 2.4 0.49 3 2 4 1 96.548 93.093 2;3 1.3745E-85 114748 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 152.48 144.79 338440000 0 334770000 3674400 0 0 0 0 0 0 0 0 0 0 0 0 4118 5187 3708 36099;36100;36101;36102;36103 28572;28573;28574;28575;28576 28572 5 AQEAEAGVLGNEK Unmodified 1314.6416 0.64155866 3321 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 30.802 30.995 2 0.00053292 32492 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.616 82.38 47312000 0 0 0 0 2599200 6544800 3096900 0 3601200 7332200 6873500 0 5042500 3981500 8240500 4119 3321 3709 36104;36105;36106;36107;36108;36109;36110;36111;36112;36113;36114;36115 28577;28578;28579;28580;28581;28582;28583;28584;28585;28586;28587;28588 28581 12 AQEAGLQQEQRK Unmodified 1384.7059 0.70589025 3342 Q8N5A5 ZGPAT Zinc finger CCCH-type with G patch domain-containing protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 2 1 1 1 1 1 1 1 1 1 1 1 9.0895 9.2028 3 0.0019048 7606 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 47.039 34.893 53653000 0 0 0 6126600 3410500 3268000 3772600 2610500 1692500 2686500 10146000 8082900 4347600 2424700 5083600 4120 3342 3710 36116;36117;36118;36119;36120;36121;36122;36123;36124;36125;36126;36127;36128 28589;28590;28591;28592;28593;28594 28592 6 AQEALSHTEQSK Unmodified 1327.6368 0.63680763 461 O75146 HIP1R Huntingtin-interacting protein 1-related protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 7.6976 7.8084 3 0.0080644 5162 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.039 40.603 21050000 0 0 0 1311700 0 1897400 2574500 0 0 3165800 0 5064600 2308600 0 4727700 4121 461 3711 36129;36130;36131;36132;36133;36134;36135 28595 28595 1 AQEANRLNAENEK Unmodified 1485.7172 0.71718322 2849 Q676U5 ATG16L1 Autophagy-related protein 16-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 2 1 1 1 1 1 1 1 1 10.833 10.937 2;3 3.0825E-07 14548 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.35 63.736 44028000 0 0 0 2761600 1651700 3580200 4515800 0 0 0 4689300 9170900 4115900 4055800 9486800 4122 2849 3712 36136;36137;36138;36139;36140;36141;36142;36143;36144;36145;36146 28596;28597;28598;28599;28600;28601 28597 5 AQEAPGQAEPPAAAEVQGAGNENEPR Unmodified 2587.1899 0.18988563 209 O14745 SLC9A3R1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 49.053 49.494 3 8.4696E-28 55062 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.196 81.222 38909000 0 0 0 0 0 0 0 8427900 0 0 9587700 0 0 0 20894000 4123 209 3713 36147;36148;36149;36150 28602;28603;28604 28602 3 AQEAPGQAEPPAAAEVQGAGNENEPREADK Unmodified 3030.3915 0.39149857 209 O14745 SLC9A3R1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 45.403 45.575 3 3.3712E-33 50127 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.341 62.73 110110000 0 0 0 3961200 4578600 4971600 5476500 0 0 9575200 16684000 15807000 9861700 12517000 26677000 4124 209 3714 36151;36152;36153;36154;36155;36156;36157;36158;36159;36160 28605;28606;28607;28608;28609;28610;28611;28612;28613;28614;28615 28608 10 AQEFGVK Unmodified 777.4021 0.40210366 2810 Q5VT52 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 17 1 1 2 2 1 1 2 2 1 1 1 2 21.692 21.912 2 0.023018 22756 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 103.29 21.023 624100000 0 0 0 30611000 29431000 37478000 40352000 50296000 37564000 59426000 82300000 80127000 59942000 47473000 69096000 4125 2810 3715 36161;36162;36163;36164;36165;36166;36167;36168;36169;36170;36171;36172;36173;36174;36175;36176;36177 28616;28617;28618;28619;28620;28621;28622 28618 7 AQEFVNCK Acetyl (Protein N-term) 1036.4648 0.46478027 1367 P35754 GLRX Glutaredoxin-1 yes yes 1 0 0 By MS/MS By MS/MS 5.5 4.5 1 1 1 1 77.004 77.135 2 0.0021946 58020 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 122.13 97.309 47372000 0 18454000 0 28918000 0 0 0 0 0 0 0 0 0 0 0 4126 1367 3716 36178;36179 28623;28624 28624 2 AQEGESTLEIRK Unmodified 1359.6994 0.69940789 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 28.065 27.456 3 0.0051485 29193 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 35.204 20.002 89765000 0 19528000 5632900 0 6110500 6821700 7243300 0 5440200 8469700 0 10709000 0 6651900 13158000 4127 645 3717 36180;36181;36182;36183;36184;36185;36186;36187;36188;36189 28625;28626;28627;28628;28629;28630;28631;28632;28633 28629 6 AQEGGGSEVFQELK Unmodified 1477.7049 0.7048872 3407 Q8NCA5 FAM98A Protein FAM98A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 60.824 60.155 2 2.6171E-29 76787 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 137.01 128.54 216760000 0 101400000 0 5927700 4482500 10796000 9639600 6293800 6878900 10720000 9623500 14251000 8250000 9145900 19347000 4128 3407 3718 36190;36191;36192;36193;36194;36195;36196;36197;36198;36199;36200;36201;36202;36203 28634;28635;28636;28637;28638;28639;28640;28641;28642;28643;28644;28645;28646 28637 13 AQEIDGQALLLLK Unmodified 1410.8082 0.80823006 3419;3261 Q8NDX5;Q8IXK0 PHC3;PHC2 Polyhomeotic-like protein 3;Polyhomeotic-like protein 2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 84.396 84.538 2 0.0016512 97013 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 62.303 51.473 31332000 0 0 0 0 0 0 0 0 2723500 3845400 3481600 6440100 3036600 4444600 7360100 4129 3419;3261 3719 36204;36205;36206;36207;36208;36209;36210 28647;28648;28649;28650;28651;28652;28653 28651 7 AQEILSQLPIK Unmodified 1238.7234 0.72343779 1367 P35754 GLRX Glutaredoxin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.641 78.688 2 0.0014517 90917 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 85.731 78.059 118420000 0 0 0 24490000 5978800 6804400 6137300 11035000 0 10664000 10117000 13184000 7761800 10716000 11534000 4130 1367 3720 36211;36212;36213;36214;36215;36216;36217;36218;36219;36220;36221;36222 28654;28655;28656;28657;28658;28659;28660;28661;28662;28663;28664;28665;28666 28664 13 AQEIQDESAVLWLDEIQGGIWQSNK Unmodified 2856.393 0.39300212 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 99.663 95.631 3 0.001298 114748 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 34.715 28.352 19057000 0 19057000 0 0 0 0 0 0 0 0 0 0 0 0 0 4131 1518 3721 36223;36224 28667 28667 1 AQELAQPGDLCK Unmodified 1328.6395 0.63945017 4721 Q9NX74 DUS2 tRNA-dihydrouridine(20) synthase [NAD(P)+]-like yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 40.65 41.022 2 0.0076173 44716 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 71.03 59.427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4132 4721 3722 36225;36226 28668;28669 28669 2 AQELGHSQSALASAQR Unmodified 1652.823 0.82304527 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.876 28.074 3 1.812E-23 30090 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 96.666 92.568 197690000 0 0 0 9004500 14924000 19853000 15525000 12446000 14920000 20392000 17578000 21192000 15778000 15692000 20383000 4133 2459 3723 36227;36228;36229;36230;36231;36232;36233;36234;36235;36236;36237;36238 28670;28671;28672;28673;28674;28675;28676;28677;28678;28679;28680;28681;28682;28683;28684;28685 28670 15 AQELGLVELLEK Unmodified 1340.7551 0.75513185 3166 Q86VI3 IQGAP3 Ras GTPase-activating-like protein IQGAP3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 89.83 89.97 2 0.015995 104188 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.743 28.606 4946500 0 0 0 0 0 0 0 0 0 1428000 838850 0 0 895700 1784000 4134 3166 3724 36239;36240;36241;36242 28686;28687 28687 2 AQELQAVLGLS Unmodified 1127.6186 0.61863837 3522 Q8TEX9 IPO4 Importin-4 yes yes 0 0 0 By MS/MS 1 0 1 1 105.44 110.7 2 5.2523E-05 91174 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 113.66 76.109 39439000 39439000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4135 3522 3725 36243 28688 28688 1 AQELRDGENEEESTK Unmodified 1733.7704 0.77040058 313 O43298 ZBTB43 Zinc finger and BTB domain-containing protein 43 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 12.738 12.939 3 0.004771 12087 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 40.278 36.176 49212000 0 0 0 0 3291200 8971400 0 1699800 4895200 4572800 2585600 5229300 5883700 4678800 7404200 4136 313 3726 36244;36245;36246;36247;36248;36249;36250;36251;36252;36253 28689;28690;28691;28692;28693 28689 5 AQENYEGSEEVSPPQTK Unmodified 1891.8436 0.84356552 3701 Q93008 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.529 36.71 2 2.1485E-18 39293 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 124.3 111.74 91527000 0 0 0 4643500 3662200 8415700 3818200 4735300 5857700 6289700 7790100 12247000 7350800 9755300 16961000 4137 3701 3727 36254;36255;36256;36257;36258;36259;36260;36261;36262;36263;36264;36265 28694;28695;28696;28697;28698;28699;28700;28701;28702;28703;28704;28705 28701 12 AQEPESGLSEETQVK Unmodified 1630.7686 0.76860967 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.765 38.944 2 1.5299E-59 42971 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 176.8 169.83 960750000 0 0 0 53974000 45928000 74660000 57727000 49537000 41861000 87999000 129690000 126670000 84217000 75867000 132630000 4138 1986 3728 36266;36267;36268;36269;36270;36271;36272;36273;36274;36275;36276;36277 28706;28707;28708;28709;28710;28711;28712;28713;28714;28715;28716;28717;28718;28719 28714 14 AQEPLVDGCSGGGR Unmodified 1401.6307 0.6306764 3070 Q7Z2K6 ERMP1 Endoplasmic reticulum metallopeptidase 1 yes yes 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 29.48 29.407 2 0.0047644 32132 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 44.847 30.729 7742400 0 0 0 0 1983900 0 2530300 0 0 3228200 0 0 0 0 0 4139 3070 3729 36278;36279;36280 28720 28720 1 AQEPSAAIPK Unmodified 1010.5397 0.53965977 2539 Q15459 SF3A1 Splicing factor 3A subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.59 31.776 2 0.0029838 35206 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 78.149 49.931 629770000 0 0 0 32353000 46912000 56837000 52905000 46407000 41252000 54500000 56672000 73185000 41654000 55016000 72081000 4140 2539 3730 36281;36282;36283;36284;36285;36286;36287;36288;36289;36290;36291;36292 28721;28722;28723;28724;28725;28726;28727;28728;28729;28730;28731;28732;28733;28734;28735;28736 28736 13 AQEQQQQMAELHSK Unmodified 1654.7733 0.77331789 4817 Q9P2E9 RRBP1 Ribosome-binding protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 26.15 21.98 3 0.0030598 28844 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 35.916 27.881 23862000 0 23862000 0 0 0 0 0 0 0 0 0 0 0 0 0 4141 4817 3731 36293;36294 28737;28738 28737 2 AQERELLEAVDAR Unmodified 1498.774 0.77396981 1253 P29590 PML Protein PML yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 2 1 1 1 1 1 1 1 1 56.723 56.941 3 0.00014601 64603 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 68.044 53.613 82097000 0 0 0 0 4771200 0 7124200 0 6320800 0 11536000 13523000 10054000 12614000 16154000 4142 1253 3732 36295;36296;36297;36298;36299;36300;36301;36302;36303;36304;36305;36306 28739;28740;28741;28742;28743;28744;28745;28746;28747;28748;28749;28750;28751 28745 13 AQEREQIK Unmodified 1000.5302 0.53015772 79;960;2056;83;109;91 CON__P35908v2;P35908;CON__P35908;CON__Q9R0H5;CON__Q01546;CON__Q3SY84;Q3SY84;P12035;CON__P12035;Q01546 KRT2;KRT71;KRT3;KRT76 Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 71;Keratin, type II cytoskeletal 3;Keratin, type II cytoskeletal 2 oral no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 5.8525 5.1747 2 1.3977E-10 3440 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 166.82 79.988 + 2622500000 122520000 599240000 379980000 338990000 123840000 180450000 123090000 279630000 138350000 64584000 45405000 83095000 86902000 36170000 20263000 4143 79;109;83;91;960;2056 3733 36307;36308;36309;36310;36311;36312;36313;36314;36315;36316;36317;36318;36319;36320;36321;36322 28752;28753;28754;28755;28756;28757;28758;28759;28760;28761 28753 6 AQESGQGSTAGPLRPPPPGAGGPATPSK Unmodified 2569.2885 0.28847747 3968 Q96RK0 CIC Protein capicua homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 45.67 45.936 3 3.772E-85 50528 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 119.33 105.26 79770000 0 0 0 0 5334600 0 7619600 9105900 0 8371400 10337000 11242000 8648900 8884100 10227000 4144 3968 3734 36323;36324;36325;36326;36327;36328;36329;36330;36331 28762;28763;28764;28765;28766;28767;28768;28769;28770;28771;28772;28773;28774 28764 13 AQESVGIYEVTHQFVK Unmodified 1833.9261 0.92611336 4703 Q9NWV4 C1orf123 UPF0587 protein C1orf123 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 4.67 3.77 4 2 1 1 2 1 1 81.498 78.597 2;3 0.00011159 95990 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 87.932 75.727 222480000 93819000 44230000 65423000 0 0 0 0 0 0 0 0 4606900 0 0 14396000 4145 4703 3735 36332;36333;36334;36335;36336;36337 28775;28776;28777;28778;28779 28777 3 AQETDSPLFLATR Unmodified 1447.7307 0.73070802 4290 Q9C0E2 XPO4 Exportin-4 yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 73.854 73.935 2 0.00053292 84255 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 83.397 54.67 38355000 0 0 0 0 2579000 8011700 3085600 4338700 0 5332200 0 0 0 4476600 10531000 4146 4290 3736 36338;36339;36340;36341;36342;36343;36344 28780;28781;28782;28783 28783 4 AQETEAAPSQAPADEPEPESAAAQSQENQDTRPK Unmodified 3577.6041 0.60407012 5031 Q9UNF1 MAGED2 Melanoma-associated antigen D2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.29 6 1 24 3 4 2 2 2 2 2 2 2 2 2 2 2 2 42.077 40.893 3;4 1.2027E-215 46180 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 187.69 185.9 2589800000 53545000 132440000 0 119500000 142200000 176360000 219870000 248520000 161400000 245070000 248730000 232900000 208060000 165750000 235490000 4147 5031 3737 36345;36346;36347;36348;36349;36350;36351;36352;36353;36354;36355;36356;36357;36358;36359;36360;36361;36362;36363;36364;36365;36366;36367;36368;36369;36370;36371;36372;36373;36374;36375 28784;28785;28786;28787;28788;28789;28790;28791;28792;28793;28794;28795;28796;28797;28798;28799;28800;28801;28802;28803;28804;28805;28806;28807;28808;28809;28810 28807 26 AQETGHLVMDVR Unmodified 1354.6663 0.66633362 3573 Q8WWI1 LMO7 LIM domain only protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 42.112 42.351 3 0.028624 46284 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.481 35.268 97227000 0 0 0 3279100 0 7370700 6845300 3594200 4256600 9816400 11460000 17858000 9804200 7676200 15266000 4148 3573 3738 36376;36377;36378;36379;36380;36381;36382;36383;36384;36385;36386 28811 28811 0 AQETGHLVMDVRR Unmodified 1510.7674 0.76744465 3573 Q8WWI1 LMO7 LIM domain only protein 7 yes yes 0 0 1 By MS/MS 10 0 1 1 34.376 35.103 3 0.0016466 37630 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.552 21.158 9823400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9823400 4149 3573 3739 36387 28812 28812 1 AQETMDSLAMVEGVSSCQDLYRK Oxidation (M) 2633.1771 0.17713738 3204 Q86Y56 DNAAF5 Dynein assembly factor 5, axonemal yes yes 0 1 1 By MS/MS 2 0 1 1 78.208 73.433 3 5.2102E-11 91618 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.444 68.826 33906000 0 33906000 0 0 0 0 0 0 0 0 0 0 0 0 0 4150 3204 3740 36388 28813 28813 4821 1 AQEVEAELLESHQEETNQLLK Unmodified 2437.1973 0.19726242 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 76.019 76.256 3 5.1133E-08 87594 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.072 61.983 28145000 0 0 0 0 0 0 0 8207000 0 0 0 0 0 0 19938000 4151 2291 3741 36389;36390 28814 28814 1 AQEVSEYLSQNPR Acetyl (Protein N-term) 1561.7372 0.73724996 4733 Q9NXV6 CDKN2AIP CDKN2A-interacting protein yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.139 81.199 2 2.1065E-13 93470 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 134.75 127.1 399110000 0 0 0 22294000 28306000 34750000 29386000 23143000 22252000 36476000 46231000 42737000 34793000 27292000 51449000 4152 4733 3742 36391;36392;36393;36394;36395;36396;36397;36398;36399;36400;36401;36402 28815;28816;28817;28818;28819;28820;28821;28822;28823;28824;28825;28826 28819 12 AQFADIEPK Unmodified 1017.5131 0.51311067 4307 Q9GZT9 EGLN1 Egl nine homolog 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 52.276 45.39 2 0.021233 59141 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.301 54.467 236610000 6593900 230010000 0 0 0 0 0 0 0 0 0 0 0 0 0 4153 4307 3743 36403;36404 28827 28827 1 AQFAEATQR Unmodified 1020.4989 0.49885759 596 O94874 UFL1 E3 UFM1-protein ligase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 20.146 20.305 2 0.03116 19747 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.869 30.905 21293000 0 0 0 2814800 1536000 1767200 2080700 2168300 0 1949700 0 3961700 0 1806600 3207700 4154 596 3744 36405;36406;36407;36408;36409;36410;36411;36412;36413 28828 28828 1 AQFAQPEILIGTIPGAGGTQR Unmodified 2124.1328 0.13275209 1267 P30084 ECHS1 Enoyl-CoA hydratase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 2 87.566 87.711 2;3 0.0064038 101462 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 29.058 12.746 16895000 0 0 0 0 0 0 0 1130800 0 0 0 2458800 0 1437600 11868000 4155 1267 3745 36414;36415;36416;36417;36418 28829;28830 28829 1 AQFEGIVTDLIR Unmodified 1360.7351 0.73506511 1399 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 0 0 By MS/MS 10 0 1 1 88.77 88.914 2 0.012675 102882 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.347 47.551 3818600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3818600 4156 1399 3746 36419 28831 28831 1 AQFERDLQGRDEQSEEK Unmodified 2063.9508 0.95082456 1356 P35579 MYH9 Myosin-9 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 4 24 2 2 2 2 2 2 2 2 2 2 2 2 2 2 27.888 27.384 3;4 1.5168E-35 28768 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 136.39 93.478 1975200000 181590000 0 205310000 81138000 83071000 103600000 152620000 108300000 144920000 152140000 229450000 143180000 186620000 109460000 93824000 4157 1356 3747 36420;36421;36422;36423;36424;36425;36426;36427;36428;36429;36430;36431;36432;36433;36434;36435;36436;36437;36438;36439;36440;36441;36442;36443;36444;36445;36446;36447 28832;28833;28834;28835;28836;28837;28838;28839;28840;28841;28842;28843;28844;28845;28846;28847;28848 28848 12 AQFFLGTTNK Unmodified 1125.5819 0.58185894 4682 Q9NVT9 ARMC1 Armadillo repeat-containing protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.6 2.8 1 4 1 1 1 1 1 61.539 60.261 2 0.021168 68586 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 46.819 31.438 15121000 0 4432600 0 0 1820200 4520100 4348100 0 0 0 0 0 0 0 0 4158 4682 3748 36448;36449;36450;36451;36452 28849;28850;28851;28852 28849 4 AQFFVEDASTASALK Unmodified 1583.7831 0.78313752 4861 Q9UBU9 NXF1 Nuclear RNA export factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 75.322 75.348 2 3.1528E-05 86806 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 95.401 81.243 58955000 0 0 0 3725600 5336000 6055100 6003100 4666500 5595100 7510200 7791900 7340700 4930800 0 0 4159 4861 3749 36453;36454;36455;36456;36457;36458;36459;36460;36461;36462 28853;28854;28855;28856;28857;28858;28859;28860;28861;28862;28863 28855 11 AQFGGQK Acetyl (Protein N-term) 776.3817 0.38170256 3255 Q8IX12 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes yes 1 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 24.568 24.73 2 0.010781 25992 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 72.021 72.021 199610000 0 0 0 14357000 11436000 14876000 21924000 15182000 15041000 17628000 22013000 22755000 22750000 21644000 0 4160 3255 3750 36463;36464;36465;36466;36467;36468;36469;36470;36471;36472;36473 28864;28865;28866;28867;28868;28869;28870;28871 28864 8 AQFLIQEEFNK Unmodified 1365.6929 0.69286595 4905 Q9UHP3 USP25 Ubiquitin carboxyl-terminal hydrolase 25 yes yes 0 0 0 By MS/MS 2 0 1 1 80.769 76.064 2 0.004994 94661 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.667 73.89 31869000 0 31869000 0 0 0 0 0 0 0 0 0 0 0 0 0 4161 4905 3751 36474 28872 28872 1 AQFSQILEEHK Unmodified 1328.6725 0.67246486 3058 Q7L8J4 SH3BP5L SH3 domain-binding protein 5-like yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 65.918 58.812 3 0.0069497 78537 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.164 45.001 30013000 11618000 18396000 0 0 0 0 0 0 0 0 0 0 0 0 0 4162 3058 3752 36475;36476 28873;28874 28874 2 AQFVMTQK Oxidation (M) 967.4797 0.47970205 5209 Q9Y4R8 TELO2 Telomere length regulation protein TEL2 homolog yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 21.97 18.109 2 0.010296 23718 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108 72.796 68896000 5242300 62709000 944260 0 0 0 0 0 0 0 0 0 0 0 0 4163 5209 3753 36477;36478;36479 28875 28875 6611 1 AQFVMTQK Unmodified 951.48479 0.48478743 5209 Q9Y4R8 TELO2 Telomere length regulation protein TEL2 homolog yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 38.197 32.459 2 0.024584 42725 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.119 54.254 98306000 11734000 86572000 0 0 0 0 0 0 0 0 0 0 0 0 0 4164 5209 3753 36480;36481 28876 28876 1 AQFVTCGQDK Unmodified 1152.5234 0.52335778 699 O95834 EML2 Echinoderm microtubule-associated protein-like 2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 23.132 23.455 2 0.0093471 23363 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.931 48.985 29501000 0 0 0 0 0 0 2436600 0 0 0 0 0 0 0 27064000 4165 699 3754 36482;36483 28877 28877 1 AQGAGVTLPPTPSGSR Unmodified 1494.7791 0.77905519 2940 Q6P996 PDXDC1 Pyridoxal-dependent decarboxylase domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 1 3 1 1 1 2 51.13 51.321 2 0.00030005 58307 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 89.43 81.785 1508900000 0 0 0 0 126550000 14549000 181120000 177060000 152150000 253270000 0 0 301270000 269100000 33784000 4166 2940 3755 36484;36485;36486;36487;36488;36489;36490;36491;36492;36493;36494;36495;36496;36497 28878;28879;28880;28881;28882;28883;28884;28885;28886;28887;28888;28889;28890;28891;28892 28882 12 AQGAIAMASIAK Oxidation (M) 1146.6067 0.60669348 2828 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 35.005 33.646 2 0.0051478 45325 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.096 56.835 275250000 61876000 162310000 5978400 4054900 4824200 7839200 3934500 7667400 3394700 8630300 0 0 4743000 0 0 4167 2828 3756 36498;36499;36500;36501;36502;36503;36504;36505;36506;36507;36508 28893;28894;28895 28895 4464 3 AQGAIAMASIAK Unmodified 1130.6118 0.61177885 2828 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 62.205 53.95 2 0.0029216 73009 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.417 60.331 244810000 244810000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4168 2828 3756 36509 28896 28896 1 AQGEPVAGHESPK Unmodified 1305.6313 0.63132832 614 O94979 SEC31A Protein transport protein Sec31A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 1 2 2 2 2 3 2 1 2 2 2 2 10.19 10.33 2;3 0.0019098 6765 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 55.899 45.289 178810000 0 0 0 8002800 6737800 12007000 11890000 8158900 11037000 13885000 16441000 26898000 17090000 16221000 30440000 4169 614 3757 36510;36511;36512;36513;36514;36515;36516;36517;36518;36519;36520;36521;36522;36523;36524;36525;36526;36527;36528;36529;36530;36531;36532 28897;28898;28899;28900;28901;28902;28903;28904;28905;28906 28902 5 AQGGSSDSSLALHER Unmodified 1513.7121 0.71209784 2155 Q08378 GOLGA3 Golgin subfamily A member 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 24.011 24.255 3 0.0032455 25099 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 42.314 22.574 73634000 0 0 0 4430500 0 8087800 5979600 5572800 5399800 6647000 10458000 8997700 0 5669100 12392000 4170 2155 3758 36533;36534;36535;36536;36537;36538;36539;36540;36541;36542 28907;28908;28909;28910;28911;28912;28913;28914;28915;28916;28917;28918;28919 28913 10 AQGGTVLPTEPQSEEQLSK Unmodified 1997.9906 0.99056411 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 56.496 56.587 2 2.7573E-06 63661 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.498 78.544 59398000 0 0 0 3395000 2950000 5098800 4646900 0 4462300 6087200 0 6740300 9757900 5806400 10453000 4171 2446 3759 36543;36544;36545;36546;36547;36548;36549;36550;36551;36552 28920;28921;28922;28923;28924;28925;28926;28927;28928 28923 9 AQGIAPEDK Unmodified 927.46616 0.46616048 2162 Q08752 PPID Peptidyl-prolyl cis-trans isomerase D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.53 2.94 1 2 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 13.919 13.313 2 0.016336 15483 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.165 54.271 105550000 267070 41878000 0 1912200 3345000 3678300 5416200 3989900 3563100 5691600 6097000 6654000 3987700 6813200 12260000 4172 2162 3760 36553;36554;36555;36556;36557;36558;36559;36560;36561;36562;36563;36564;36565;36566;36567 28929;28930;28931 28930 3 AQGLEVALTDLQSSR Acetyl (Protein N-term) 1628.837 0.836964 341 O43548 TGM5 Protein-glutamine gamma-glutamyltransferase 5 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 95.988 96.126 2 6.5221E-05 111830 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 84.289 70.032 7145700 0 0 0 0 0 0 0 3812800 0 1958600 0 1374200 0 0 0 4173 341 3761 36568;36569;36570;36571;36572 28932;28933;28934;28935;28936 28932 5 AQGLIEVERK Acetyl (Protein N-term) 1183.6561 0.65608651 4155 Q9BU02 THTPA Thiamine-triphosphatase yes yes 1 0 1 By MS/MS By matching 2.33 0.471 2 1 2 1 65.006 60.205 2 0.0012392 73955 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 116.3 92.15 78598000 0 77028000 1570100 0 0 0 0 0 0 0 0 0 0 0 0 4174 4155 3762 36573;36574;36575 28937;28938 28938 2 AQGPAASAEEPK Unmodified 1154.5568 0.5567664 1993 P80723 BASP1 Brain acid soluble protein 1 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 14.573 14.738 2 0.024025 14126 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 43.958 25.227 7244000 0 0 0 0 0 0 0 0 7244000 0 0 0 0 0 0 4175 1993 3763 36576;36577 28939;28940 28939 2 AQGPAASAEEPKPVEAPAANSDQTVTVK Unmodified 2762.3723 0.37226668 1993 P80723 BASP1 Brain acid soluble protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.23 3.68 5 3 14 2 5 1 2 1 1 1 1 1 2 1 1 1 1 1 52.109 50.265 3;4 2.8226E-190 61360 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 171.98 159.49 5081200000 120560000 3160900000 6780200 61621000 83830000 124400000 94415000 82063000 98927000 135060000 218380000 247970000 134050000 204560000 307670000 4176 1993 3764 36578;36579;36580;36581;36582;36583;36584;36585;36586;36587;36588;36589;36590;36591;36592;36593;36594;36595;36596;36597;36598;36599 28941;28942;28943;28944;28945;28946;28947;28948;28949;28950;28951;28952;28953;28954;28955;28956;28957;28958;28959;28960;28961;28962;28963;28964;28965;28966;28967;28968;28969;28970;28971;28972;28973;28974;28975;28976;28977;28978;28979;28980;28981 28960 40 AQGPAASAEEPKPVEAPAANSDQTVTVKE Unmodified 2891.4149 0.41485977 1993 P80723 BASP1 Brain acid soluble protein 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 53.457 52.047 3 5.7476E-126 58530 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 159.65 152.61 2051800000 61478000 435810000 0 71138000 111200000 39449000 95292000 102460000 42428000 142560000 228970000 220310000 142900000 153060000 204760000 4177 1993 3765 36600;36601;36602;36603;36604;36605;36606;36607;36608;36609;36610;36611;36612;36613;36614;36615 28982;28983;28984;28985;28986;28987;28988;28989;28990;28991;28992;28993;28994;28995;28996;28997;28998;28999 28987 18 AQGPAGEVYCPSGDK Unmodified 1534.6722 0.67220686 3213 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 35.077 35.434 2 0.00011776 38035 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 72.089 63.576 24833000 0 0 0 0 0 0 4516300 0 0 0 0 0 8764600 5702400 5849900 4178 3213 3766 36616;36617;36618;36619;36620 29000;29001;29002;29003 29001 4 AQGQEQEQERQHATTK Unmodified 1867.8773 0.87726569 3757 Q96BH1 RNF25 E3 ubiquitin-protein ligase RNF25 yes yes 0 0 1 By MS/MS 2 0 1 1 5.8012 3.5962 4 0.0052702 5258 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 51.695 40.004 25796000 0 0 25796000 0 0 0 0 0 0 0 0 0 0 0 0 4179 3757 3767 36621 29004 29004 1 AQGQGGPEQGEER Unmodified 1341.5909 0.59092007 2186 Q12774;A5YM69 ARHGEF5;ARHGEF35 Rho guanine nucleotide exchange factor 5;Rho guanine nucleotide exchange factor 35 yes no 0 0 0 By matching By matching By matching By matching By MS/MS By matching 10 0 6 1 1 1 1 1 1 6.8961 7.003 2 0.013666 5294 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 41.283 22.503 7766800 0 0 0 0 929380 0 1101600 1258500 0 0 0 1325600 1610300 1541400 0 4180 2186 3768 36622;36623;36624;36625;36626;36627 29005 29005 1 AQGQGGPEQGEERK Unmodified 1469.6859 0.68588309 2186 Q12774;A5YM69 ARHGEF5;ARHGEF35 Rho guanine nucleotide exchange factor 5;Rho guanine nucleotide exchange factor 35 yes no 0 0 1 By MS/MS 2 0 1 1 6.3569 3.1166 3 0.042237 5201 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 33.265 20.634 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4181 2186 3769 36628 29006 29006 1 AQGTDNSDQSEICK Unmodified 1551.6471 0.64711432 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.664 13.827 2 1.204E-19 13072 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 137.89 134.92 288580000 0 0 0 14224000 15142000 15637000 19655000 27233000 16612000 23795000 21949000 30928000 41243000 26066000 36097000 4182 2556 3770 36629;36630;36631;36632;36633;36634;36635;36636;36637;36638;36639;36640 29007;29008;29009;29010;29011;29012;29013;29014;29015;29016;29017;29018 29007 12 AQHEDQVEQYK Unmodified 1373.6212 0.62115757 757 P02545 LMNA Prelamin-A/C;Lamin-A/C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 14.038 14.201 2;3 5.6045E-07 12943 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 144.55 134.03 810670000 0 0 0 44829000 27138000 73149000 31562000 26523000 28301000 80202000 96951000 87076000 55632000 71738000 187570000 4183 757 3771 36641;36642;36643;36644;36645;36646;36647;36648;36649;36650;36651;36652;36653;36654;36655;36656;36657;36658;36659;36660;36661;36662;36663;36664 29019;29020;29021;29022;29023;29024;29025;29026;29027;29028;29029;29030;29031 29023 11 AQHEDQVEQYKK Unmodified 1501.7161 0.71612058 757 P02545 LMNA Prelamin-A/C;Lamin-A/C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 9.5541 9.6871 3 4.5285E-06 8280 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 107.09 100.4 169000000 0 0 0 16616000 7825300 2349600 13053000 8198800 3714700 6987700 37103000 25208000 9625700 10599000 27716000 4184 757 3772 36665;36666;36667;36668;36669;36670;36671;36672;36673;36674;36675;36676 29032;29033;29034;29035;29036;29037;29038;29039;29040;29041 29032 7 AQHPDYSFGELSR Unmodified 1505.6899 0.68990583 3143 Q86U86 PBRM1 Protein polybromo-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 52.888 52.983 3 0.011799 60243 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 27.734 22.241 97691000 0 0 0 4127000 3462100 5691100 6204300 7887100 4913200 0 0 22881000 0 9034200 33491000 4185 3143 3773 36677;36678;36679;36680;36681;36682;36683;36684;36685 29042;29043;29044;29045;29046 29044 4 AQHPNIVTVR Unmodified 1133.6305 0.63054046 1118;5069 P21127;Q9UQ88 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A no no 0 0 0 By matching By MS/MS 10 0 2 1 1 28.603 29.117 2 0.034153 30349 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.876 16.426 12048000 0 0 0 0 0 0 0 0 0 0 0 0 6428400 0 5619800 4186 1118;5069 3774 36686;36687 29047 29047 1 AQHQLGEFK Unmodified 1056.5352 0.53524309 3311 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 8 1 1 1 1 1 1 1 1 22.371 22.554 2 0.005264 23708 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 78.516 44.966 46587000 0 0 0 3026200 0 3250200 0 3877700 2710100 5425000 11247000 0 8647300 8403500 0 4187 3311 3775 36688;36689;36690;36691;36692;36693;36694;36695 29048 29048 1 AQHRDTFIEER Unmodified 1400.6797 0.6796755 4812 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 20.86 21.092 3 0.0039887 21720 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 50.563 22.701 40762000 0 0 0 0 0 6055300 0 4982400 4433800 8280300 0 0 0 4738400 12272000 4188 4812 3776 36696;36697;36698;36699;36700;36701 29049;29050;29051 29049 3 AQHTHDAITEAAQLMK Oxidation (M) 1779.8574 0.85738187 5201 Q9Y4G6 TLN2 Talin-2 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 45.358 39.689 3 0.0032777 55112 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.438 34.583 19780000 17129000 0 2651400 0 0 0 0 0 0 0 0 0 0 0 0 4189 5201 3777 36702;36703 29052 29052 6598 1 AQHVFQHAVPQEGK Unmodified 1574.7954 0.79537396 2348 Q13867 BLMH Bleomycin hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 2 2 1 1 2 2 1 26.778 27.022 3;4 5.1308E-05 29350 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 107.46 95.991 108950000 0 0 0 49586000 0 20745000 0 0 0 0 7609300 7120100 11991000 8013700 3882500 4190 2348 3778 36704;36705;36706;36707;36708;36709;36710;36711;36712;36713;36714 29053;29054;29055;29056 29056 3 AQHVFQHAVPQEGKPITNQK Unmodified 2256.1763 0.17634824 2348 Q13867 BLMH Bleomycin hydrolase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 2 1 1 1 1 1 1 1 1 35.349 35.519 4;5 5.913E-28 40713 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 70.114 62.122 247610000 0 0 0 111690000 0 11293000 9457700 13728000 0 10120000 14590000 56097000 0 3662900 16967000 4191 2348 3779 36715;36716;36717;36718;36719;36720;36721;36722;36723;36724 29057;29058;29059 29059 3 AQIADLPAGSSGNILVELDEAQK Unmodified 2338.2016 0.20161952 238 O14981 BTAF1 TATA-binding protein-associated factor 172 yes yes 0 0 0 By MS/MS 3 0 2 2 91.843 88.624 2;3 1.2636E-12 106203 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 80.412 71.555 20374000 0 20374000 0 0 0 0 0 0 0 0 0 0 0 0 0 4192 238 3780 36725;36726 29060;29061 29061 1 AQIAGYLYGVSPPDNPQVK Unmodified 2016.0316 0.031641064 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 78.66 78.819 2 2.2659E-14 91015 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 89.959 75.168 28010000 0 0 0 0 0 0 7281700 0 0 0 9160500 0 0 11568000 0 4193 2930 3781 36727;36728;36729;36730 29062;29063;29064 29062 3 AQIAIDIK Unmodified 870.51747 0.51746776 1451 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 62.943 55.866 2 0.028065 72055 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.923 21.801 67195000 9038200 58157000 0 0 0 0 0 0 0 0 0 0 0 0 0 4194 1451 3782 36731;36732 29065 29065 1 AQIDNLTR Unmodified 929.49304 0.49304393 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 29.025 28.745 2 0.0067687 31147 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 97.798 48.44 112780000 0 0 0 112780000 0 0 0 0 0 0 0 0 0 0 0 4195 1029 3783 36733;36734 29066;29067 29067 2 AQIFANTVDNAR Unmodified 1318.663 0.6629628 814 P05783 KRT18 Keratin, type I cytoskeletal 18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 26 3 3 2 2 2 2 2 2 2 2 2 2 48.652 48.783 2;3 2.8168E-97 54874 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 206.43 173.05 8383500000 0 0 0 412680000 555510000 698490000 616470000 642320000 399350000 722830000 808700000 1208000000 779070000 620720000 919420000 4196 814 3784 36735;36736;36737;36738;36739;36740;36741;36742;36743;36744;36745;36746;36747;36748;36749;36750;36751;36752;36753;36754;36755;36756;36757;36758;36759;36760 29068;29069;29070;29071;29072;29073;29074;29075;29076;29077;29078;29079;29080;29081;29082;29083;29084;29085;29086;29087;29088 29075 19 AQIFTQMQALK Unmodified 1277.6802 0.68019277 4689 Q9NW08 POLR3B DNA-directed RNA polymerase III subunit RPC2 yes yes 0 0 0 By MS/MS 2 0 1 1 79.512 71.382 2 0.00039718 93783 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.69 67.672 11989000 11989000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4197 4689 3785 36761 29089 29089 1 AQIGTVLPSLIDR Unmodified 1381.7929 0.79291434 3094 Q7Z460 CLASP1 CLIP-associating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 84.259 84.362 2 0.0014114 97376 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.415 40.037 84626000 0 0 0 0 4496500 7533000 7757000 12120000 5731900 13137000 7300100 0 4862900 7575300 14113000 4198 3094 3786 36762;36763;36764;36765;36766;36767;36768;36769;36770;36771 29090;29091;29092;29093;29094;29095;29096;29097;29098;29099 29093 10 AQIHALEGGEVK Unmodified 1250.6619 0.66190017 1081 P18858 LIG1 DNA ligase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 21 2 2 2 2 2 2 2 2 2 2 1 31.945 32.161 2;3 2.5777E-05 34982 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 100.55 81.778 420140000 0 0 0 0 28242000 46972000 37163000 33914000 28986000 49590000 58332000 61209000 32809000 29979000 12943000 4199 1081 3787 36772;36773;36774;36775;36776;36777;36778;36779;36780;36781;36782;36783;36784;36785;36786;36787;36788;36789;36790;36791;36792 29100;29101;29102;29103;29104;29105;29106;29107;29108;29109;29110;29111;29112 29102 12 AQIHDLVLVGGSTR Unmodified 1464.8049 0.80487601 908 P0DMV9;P0DMV8 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 61.22 61.322 2;3 9.155E-13 69989 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 144.57 126.71 2372800000 0 0 0 71530000 76679000 140210000 103520000 133470000 89138000 152160000 240200000 366250000 112260000 205170000 682190000 4200 908 3788 36793;36794;36795;36796;36797;36798;36799;36800;36801;36802;36803;36804;36805;36806;36807;36808;36809;36810;36811;36812;36813;36814;36815;36816 29113;29114;29115;29116;29117;29118;29119;29120;29121;29122;29123;29124;29125;29126;29127;29128;29129;29130;29131;29132;29133;29134;29135;29136;29137;29138;29139 29125 18 AQILAYK Unmodified 805.46979 0.46978929 1655 P51531 SMARCA2 Probable global transcription activator SNF2L2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 37.91 38.223 2 0.048866 42815 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 64.776 10.012 141140000 0 0 0 0 0 11869000 11326000 13139000 6881100 14769000 14978000 22536000 13876000 13806000 17961000 4201 1655 3789 36817;36818;36819;36820;36821;36822;36823;36824;36825;36826 29140 29140 1 AQILEMR Unmodified 859.45857 0.45857268 3945 Q96P63 SERPINB12 Serpin B12 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 44.164 44.336 2 0.023469 49538 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 92.187 63.933 504680000 0 0 0 96751000 28732000 28933000 17641000 66138000 20094000 43153000 36805000 38848000 52464000 33986000 41135000 4202 3945 3790 36827;36828;36829;36830;36831;36832;36833;36834;36835;36836;36837;36838 29141;29142;29143;29144;29145;29146 29144 6 AQILEMR Oxidation (M) 875.45349 0.4534873 3945 Q96P63 SERPINB12 Serpin B12 yes yes 0 1 0 By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 24.76 24.922 2 0.04343 26451 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 51.787 18.858 169820000 0 0 0 37253000 7495100 12002000 10034000 24594000 7831200 16660000 9574600 16014000 22129000 6229800 0 4203 3945 3790 36839;36840;36841;36842;36843;36844;36845;36846;36847;36848;36849 29147 29147 1 AQILGGANTPYEK Unmodified 1360.6987 0.69867961 4547 Q9NPD8 UBE2T Ubiquitin-conjugating enzyme E2 T yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.926 48.089 2 2.6251E-08 54312 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 129.89 116.12 125060000 0 0 0 5676900 3925200 13217000 9578000 4293900 6491400 18682000 14442000 12060000 8637600 10361000 17692000 4204 4547 3791 36850;36851;36852;36853;36854;36855;36856;36857;36858;36859;36860;36861 29148;29149;29150;29151;29152;29153;29154;29155;29156;29157 29148 10 AQILPIR Acetyl (Protein N-term) 851.52289 0.52288749 2040 Q00610 CLTC Clathrin heavy chain 1 yes yes 1 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.835 81.898 2 0.0076429 94715 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 84.359 46.713 327100000 0 0 0 12740000 13067000 28761000 16361000 17584000 11444000 27133000 37066000 36227000 16420000 30788000 79506000 4205 2040 3792 36862;36863;36864;36865;36866;36867;36868;36869;36870;36871;36872;36873 29158;29159;29160;29161;29162;29163;29164;29165;29166;29167;29168 29167 11 AQIMAYK Oxidation (M) 839.42112 0.42112454 1656 P51532 SMARCA4 Transcription activator BRG1 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 18.304 18.404 2 0.017184 17090 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 79.454 19.813 15110000 0 0 0 0 0 3960300 4138200 3257700 0 0 0 0 0 3754000 0 4206 1656 3793 36874;36875;36876;36877 29169;29170 29170 2668 2 AQISSPNLR Unmodified 984.53524 0.53524309 2795 Q5TCZ1 SH3PXD2A SH3 and PX domain-containing protein 2A yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 32.939 33.168 2 0.0071283 36655 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 73.248 21.461 89615000 0 0 0 0 6552300 6644300 10757000 10004000 6299600 8302800 13082000 8425700 0 6888100 12659000 4207 2795 3794 36878;36879;36880;36881;36882;36883;36884;36885;36886;36887 29171;29172;29173;29174;29175;29176 29176 6 AQIWDTAGQER Unmodified 1273.6051 0.60511357 2593 Q15907;P62491 RAB11B;RAB11A Ras-related protein Rab-11B;Ras-related protein Rab-11A yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.014 46.182 2 1.5838E-05 51857 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 134.68 125.46 723510000 0 0 0 25003000 30378000 46802000 51791000 89671000 34054000 61937000 93883000 93291000 64864000 43092000 88739000 4208 2593 3795 36888;36889;36890;36891;36892;36893;36894;36895;36896;36897;36898;36899 29177;29178;29179;29180;29181;29182;29183;29184;29185;29186;29187;29188;29189 29186 13 AQLDEWK Unmodified 888.43413 0.43413207 1596 P49756 RBM25 RNA-binding protein 25 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.619 37.799 2 0.028147 41195 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.847 46.178 775130000 0 0 0 32689000 33068000 36800000 67091000 46859000 51771000 69883000 74112000 99162000 91191000 61630000 110880000 4209 1596 3796 36900;36901;36902;36903;36904;36905;36906;36907;36908;36909;36910;36911 29190 29190 1 AQLDPAFIK Unmodified 1001.5546 0.55458155 1186 P25325 MPST 3-mercaptopyruvate sulfurtransferase yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 62.486 62.658 2 0.040615 71286 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 44.349 22.112 41155000 0 0 0 4851900 0 0 0 0 0 2952200 6400000 7685500 0 5301000 13964000 4210 1186 3797 36912;36913;36914;36915;36916;36917 29191 29191 1 AQLDSFVK Unmodified 906.48108 0.48108226 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 48.745 49.151 2 0.035595 55397 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 52.403 34.555 85586000 0 0 0 0 0 0 9152000 0 0 11874000 18591000 16479000 16164000 0 13327000 4211 2446 3798 36918;36919;36920;36921;36922;36923 29192;29193;29194 29192 3 AQLEGRLEEK Unmodified 1171.6197 0.619701 3489 Q8TCG1 KIAA1524 Protein CIP2A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 5 1 2 2 28.099 24.03 2;3 0.0053819 30351 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 70.056 31.489 101250000 9027100 40187000 52032000 0 0 0 0 0 0 0 0 0 0 0 0 4212 3489 3799 36924;36925;36926;36927;36928 29195;29196;29197 29196 2 AQLELAQK Unmodified 899.50763 0.50763136 2816 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 30.298 29.772 2 0.011504 32157 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 76.774 14.116 453250000 0 236390000 1666800 15009000 13113000 0 19485000 15244000 17450000 19743000 23812000 0 25730000 22160000 43441000 4213 2816 3800 36929;36930;36931;36932;36933;36934;36935;36936;36937;36938;36939;36940 29198;29199;29200;29201;29202;29203;29204;29205;29206;29207 29198 9 AQLENHEPEEEEEEEMETEEK Oxidation (M) 2603.0341 0.034081002 3366 Q8N7H5 PAF1 RNA polymerase II-associated factor 1 homolog yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 2 1 1 1 1 1 1 1 1 1 1 1 1 34.231 33.099 3 1.5645E-74 36257 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 146.89 146.89 210030000 40778000 23619000 0 5812600 11095000 10883000 7347900 0 6434400 11024000 19362000 32604000 16532000 12562000 11978000 4214 3366 3801 36941;36942;36943;36944;36945;36946;36947;36948;36949;36950;36951;36952;36953;36954 29208;29209;29210;29211;29212;29213;29214;29215;29216;29217;29218;29219;29220;29221;29222 29220 4939 14 AQLENHEPEEEEEEEMETEEK Unmodified 2587.0392 0.03916638 3366 Q8N7H5 PAF1 RNA polymerase II-associated factor 1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.56 3 2 1 13 1 2 1 1 1 1 1 1 1 2 1 1 1 1 44.718 43.64 3 8.5426E-59 49155 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 126.91 122.49 310390000 41697000 40021000 0 7864100 11213000 17737000 15243000 18645000 10439000 27349000 25015000 24151000 18162000 22415000 30442000 4215 3366 3801 36955;36956;36957;36958;36959;36960;36961;36962;36963;36964;36965;36966;36967;36968;36969;36970 29223;29224;29225;29226;29227;29228;29229;29230;29231;29232;29233;29234;29235;29236;29237;29238;29239;29240;29241;29242 29223 18 AQLEPVASPAK Unmodified 1109.6081 0.60807369 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.93 35.111 2 0.001453 37410 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 72.643 51.179 200000000 0 0 0 27169000 10524000 17008000 12137000 11285000 9689100 19135000 22968000 19159000 15281000 12489000 23156000 4216 2501 3802 36971;36972;36973;36974;36975;36976;36977;36978;36979;36980;36981;36982 29243;29244;29245;29246;29247;29248;29249;29250;29251;29252;29253;29254 29250 12 AQLEQGEPVLETPVESQQHEIESR Unmodified 2732.3253 0.32531648 1693 P52630 STAT2 Signal transducer and activator of transcription 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 67.53 67.495 3 9.9336E-12 77416 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 44.171 41.677 60865000 0 0 0 5797100 3444100 11983000 0 0 5266200 9439700 10899000 0 5664800 8370900 0 4217 1693 3803 36983;36984;36985;36986;36987;36988;36989;36990 29255;29256;29257;29258;29259;29260;29261;29262;29263;29264;29265 29259 11 AQLEQGGVGIRR Unmodified 1282.7106 0.7105817 2921 Q6P1N0 CC2D1A Coiled-coil and C2 domain-containing protein 1A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 29.726 29.918 3 0.0031537 31171 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 47.288 35.074 156300000 0 0 0 7950000 8949000 10875000 0 10587000 12884000 16001000 17578000 15972000 0 23744000 31758000 4218 2921 3804 36991;36992;36993;36994;36995;36996;36997;36998;36999;37000;37001 29266;29267;29268;29269 29268 4 AQLFALTGVQPAR Unmodified 1370.767 0.76703394 1741 P54578 USP14 Ubiquitin carboxyl-terminal hydrolase 14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.062 79.166 2 2.5753E-28 91463 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 147.73 118.81 506830000 0 0 0 0 11839000 63152000 25471000 22249000 17588000 49728000 58178000 62266000 29335000 44204000 122820000 4219 1741 3805 37002;37003;37004;37005;37006;37007;37008;37009;37010;37011;37012 29270;29271;29272;29273;29274;29275;29276;29277;29278;29279;29280;29281;29282;29283;29284 29272 14 AQLFALTGVQPARQK Unmodified 1626.9206 0.92057447 1741 P54578 USP14 Ubiquitin carboxyl-terminal hydrolase 14 yes yes 0 0 1 By MS/MS 2 0 1 1 79.426 71.296 3 0.0034891 93815 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.658 47.863 54390000 54390000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4220 1741 3806 37013 29285;29286 29286 2 AQLGEDIR Unmodified 900.46649 0.46649483 3654 Q92734 TFG Protein TFG yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 28.816 29.176 2 0.0075386 31271 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 89.296 12.449 200140000 0 0 0 0 0 0 13700000 7483900 0 14466000 25642000 22987000 10932000 28304000 76624000 4221 3654 3807 37014;37015;37016;37017;37018;37019;37020;37021 29287;29288;29289;29290 29289 3 AQLGGPEAAK Unmodified 940.49779 0.49779495 786 P04792 HSPB1 Heat shock protein beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.82 2.89 1 3 24 2 1 1 2 2 2 2 2 2 2 2 2 2 2 2 19.713 19.675 1;2 1.6474E-09 15465 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 146.69 94.01 12076000000 119790000 1152200000 7412700 638880000 386800000 509290000 736490000 511660000 686800000 851710000 1162800000 1190000000 890610000 1003700000 2227600000 4222 786 3808 37022;37023;37024;37025;37026;37027;37028;37029;37030;37031;37032;37033;37034;37035;37036;37037;37038;37039;37040;37041;37042;37043;37044;37045;37046;37047;37048;37049 29291;29292;29293;29294;29295;29296;29297;29298;29299;29300;29301;29302;29303;29304;29305;29306;29307;29308 29301 10 AQLGGPEAAKSDETAAK Unmodified 1642.8162 0.81622856 786 P04792 HSPB1 Heat shock protein beta-1 yes yes 0 0 1 By MS/MS By matching 10 0 2 1 1 21.498 21.74 3 0.0087846 22815 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 33.872 14.231 18455000 0 0 0 4449400 0 0 0 0 0 0 0 14005000 0 0 0 4223 786 3809 37050;37051 29309 29309 1 AQLGPDESK Unmodified 943.46108 0.4610751 961 P12081 HARS Histidine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 15.458 11.731 2 0.0073568 17241 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.162 74.387 140490000 25646000 114850000 0 0 0 0 0 0 0 0 0 0 0 0 0 4224 961 3810 37052;37053 29310;29311 29311 2 AQLHDTNMELTDLK Unmodified 1627.7876 0.78757097 232 O14974 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 57.552 57.15 3 1.9479E-06 75437 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.21 83.635 165390000 0 48818000 0 0 10469000 0 8420500 0 8006000 12386000 19541000 19177000 13813000 10175000 14584000 4225 232 3811 37054;37055;37056;37057;37058;37059;37060;37061;37062;37063 29312;29313;29314;29315;29316;29317;29318;29319;29320 29313 6 AQLHDTNMELTDLK Oxidation (M) 1643.7825 0.78248559 232 O14974 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes yes 0 1 0 By MS/MS 2 0 1 1 50.187 44.481 3 0.00054332 57949 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.136 55.113 37460000 0 37460000 0 0 0 0 0 0 0 0 0 0 0 0 0 4226 232 3811 37064 29321 29321 306 1 AQLLEPSK Unmodified 884.49673 0.49673232 1753 P55039 DRG2 Developmentally-regulated GTP-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 28.437 28.759 2 0.027935 31065 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 57.047 17.385 24189000 0 0 0 0 0 0 0 0 0 7534500 8766800 0 7888200 0 0 4227 1753 3812 37065;37066;37067 29322 29322 1 AQLLGGAQLQPGR Unmodified 1307.731 0.73098279 3133 Q86TB9 PATL1 Protein PAT1 homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 2 1 1 1 1 57.642 57.993 2 0.0014399 65204 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 63.283 52.526 40869000 0 0 0 0 0 0 0 4489200 0 0 0 11299000 8581900 8194800 8303500 4228 3133 3813 37068;37069;37070;37071;37072;37073;37074;37075;37076;37077 29323;29324;29325;29326;29327;29328;29329;29330;29331;29332 29330 10 AQLLLDQEAESASQK Unmodified 1629.821 0.82097959 2695 Q52LW3 ARHGAP29 Rho GTPase-activating protein 29 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.86 3.4 1 1 5 2 1 1 1 1 1 58.484 56.702 2 1.4143E-22 72280 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.45 124.54 38554000 0 22220000 0 0 3341800 0 4412400 0 0 0 0 0 4181200 4398700 0 4229 2695 3814 37078;37079;37080;37081;37082;37083;37084 29333;29334;29335;29336;29337;29338 29334 6 AQLLQGLDEAK Unmodified 1184.6401 0.6401021 1575 P49454 CENPF Centromere protein F yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 60.751 60.936 2 0.041545 69658 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 36.585 21.747 5186000 0 0 0 0 0 0 0 4129100 0 0 0 0 1056900 0 0 4230 1575 3815 37085;37086 29339 29339 1 AQLLQIQTELNNSK Unmodified 1598.8628 0.86278482 4621 Q9NS87 KIF15 Kinesin-like protein KIF15 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 77.466 74.047 2 2.7745E-18 92536 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.56 117.61 5011900 0 5011900 0 0 0 0 0 0 0 0 0 0 0 0 0 4231 4621 3816 37087;37088 29340;29341;29342 29340 3 AQLLQPTLEINPR Unmodified 1491.8409 0.84092717 2210 Q12931 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.088 78.147 2 4.2133E-12 90081 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 132.78 122.83 708690000 0 0 0 40144000 41978000 73460000 44951000 48993000 37111000 81908000 63507000 73694000 70761000 47774000 84408000 4232 2210 3817 37089;37090;37091;37092;37093;37094;37095;37096;37097;37098;37099;37100 29343;29344;29345;29346;29347;29348;29349;29350;29351;29352;29353;29354 29349 12 AQLLQQTR Unmodified 956.54033 0.54032847 3928 Q96MW5 COG8 Conserved oligomeric Golgi complex subunit 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 24.811 25.051 2 0.020339 25262 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.88 18.113 24575000 0 0 0 0 3535100 0 0 4317200 2311700 0 3647500 0 0 3871200 6892200 4233 3928 3818 37101;37102;37103;37104;37105;37106 29355 29355 1 AQLLVVGSPGPVPR Unmodified 1388.814 0.81398414 1315 P32004 L1CAM Neural cell adhesion molecule L1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.972 75.034 2 1.078E-05 86394 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 89.548 79.024 78260000 0 0 0 2836500 4603200 4468400 4016800 4228600 4571400 6943200 8318500 13321000 7777700 8043100 9131000 4234 1315 3819 37107;37108;37109;37110;37111;37112;37113;37114;37115;37116;37117;37118 29356;29357;29358;29359;29360;29361;29362;29363;29364;29365;29366;29367 29358 12 AQLMEEDINAR Oxidation (M) 1304.6031 0.60306466 5327 yes yes 0 1 0 By MS/MS By MS/MS By matching By matching 10 0 5 2 1 1 1 80.943 80.931 2 0.0081556 93634 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 47.603 30.372 + 10839000 0 0 0 0 4508100 0 2537900 2203000 0 0 0 0 0 1590400 0 4235 5327 3820 37119;37120;37121;37122;37123 29368 29368 6723 1 AQLMLRYPDGK Unmodified 1290.6754 0.67544174 598 O94888 UBXN7 UBX domain-containing protein 7 yes yes 0 0 1 By MS/MS 2 0 1 1 64.458 56.178 3 0.0058874 75697 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.786 39.203 17164000 17164000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4236 598 3821 37124 29369 29369 1 AQLNELVNSHGR Unmodified 1336.6848 0.68476088 3666 Q92817 EVPL Envoplakin yes yes 0 0 0 By MS/MS 10 0 1 1 40.051 39.557 3 0.036918 44556 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 41.339 35.018 15791000 0 0 0 15791000 0 0 0 0 0 0 0 0 0 0 0 4237 3666 3822 37125 29370 29370 0 AQLPDLLSEQRAK Unmodified 1467.8045 0.80454166 4408 Q9H5N1 RABEP2 Rab GTPase-binding effector protein 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 71.621 65.716 3 0.018849 87180 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.813 31.046 10416000 6875800 0 3540700 0 0 0 0 0 0 0 0 0 0 0 0 4238 4408 3823 37126;37127 29371;29372 29371 2 AQLQEYQDK Unmodified 1121.5353 0.53530267 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 20.316 20.46 2 0.0035031 20785 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 103.56 79.36 42580000 0 0 0 0 6079200 0 6451900 5434500 6890200 0 11561000 0 0 6163100 0 4239 2446 3824 37128;37129;37130;37131;37132;37133;37134;37135;37136;37137 29373;29374;29375;29376;29377;29378;29379;29380;29381;29382 29377 10 AQLQQHNLEMVGEGTRQ Unmodified 1937.9378 0.93775745 2590 Q15853 USF2 Upstream stimulatory factor 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.684 45.853 3 3.3506E-14 50579 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 94.882 88.153 110270000 0 0 0 7375800 5459100 8795100 6850100 10041000 4350500 9302600 12946000 9444000 10161000 8412400 17129000 4240 2590 3825 37138;37139;37140;37141;37142;37143;37144;37145;37146;37147;37148;37149 29383;29384;29385;29386;29387;29388;29389;29390;29391;29392;29393 29389 11 AQLQQVEAALSGNGENEDLLK Unmodified 2226.1128 0.11280451 563 O75940 SMNDC1 Survival of motor neuron-related-splicing factor 30 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.2 3.82 3 2 5 4 1 1 1 1 1 1 85.336 83.553 2;3 1.295E-82 99773 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 119.37 107.1 454890000 0 400990000 2475400 0 0 0 0 0 0 9231900 8938100 9851500 0 5946400 17456000 4241 563 3826 37150;37151;37152;37153;37154;37155;37156;37157;37158;37159 29394;29395;29396;29397;29398;29399;29400;29401;29402;29403 29399 8 AQLRELNITAAK Unmodified 1326.7619 0.76194857 1871 P62081 RPS7 40S ribosomal protein S7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.6 3.67 3 7 2 1 1 1 1 1 1 1 1 51.198 49.179 2;3 0.00049951 69073 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.122 59.161 503720000 435840000 0 4062000 6885300 4620500 0 10051000 7519000 10020000 6516200 0 0 0 0 18209000 4242 1871 3827 37160;37161;37162;37163;37164;37165;37166;37167;37168;37169 29404;29405;29406 29405 1 AQLSPGIYDDTSAR Unmodified 1492.7158 0.71578623 488 O75376 NCOR1 Nuclear receptor corepressor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 51.216 51.352 2 3.4906E-19 58244 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 134.75 105.01 170450000 0 0 0 9697700 12315000 13858000 14886000 15533000 13799000 18392000 17426000 20232000 0 17914000 16392000 4243 488 3828 37170;37171;37172;37173;37174;37175;37176;37177;37178;37179;37180 29407;29408;29409;29410;29411;29412;29413;29414;29415;29416;29417;29418 29413 12 AQLSQYFDAVK Unmodified 1268.6401 0.6401021 5123 Q9Y2W2 WBP11 WW domain-binding protein 11 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS 10 0 4 1 1 1 1 74.475 74.465 2 0.012757 85846 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 47.228 23.799 28270000 0 0 0 0 4286500 4261000 0 0 0 8853800 0 10869000 0 0 0 4244 5123 3829 37181;37182;37183;37184 29419 29419 1 AQLSSLNETIK Unmodified 1202.6507 0.65066678 3894 Q96JI7 SPG11 Spatacsin yes yes 0 0 0 By MS/MS 2 0 1 1 55.471 49.656 2 0.020694 64413 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.893 41.892 42152000 0 42152000 0 0 0 0 0 0 0 0 0 0 0 0 0 4245 3894 3830 37185 29420 29420 1 AQLSSSLQEGVMQK Unmodified 1504.7555 0.75554256 717 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 yes yes 0 0 0 By MS/MS 2 0 1 1 59.21 53.367 2 3.8108E-10 68745 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.34 79.966 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4246 717 3831 37186 29421 29421 1 AQLSTILEEEK Unmodified 1259.6609 0.66089712 2114 Q05397 PTK2 Focal adhesion kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 66.253 65.451 2 0.00039146 73944 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.898 67.627 362790000 0 212600000 0 9015800 9570700 14727000 12977000 0 10835000 17106000 16138000 20434000 0 14698000 24689000 4247 2114 3832 37187;37188;37189;37190;37191;37192;37193;37194;37195;37196;37197;37198 29422;29423;29424;29425;29426;29427;29428;29429;29430;29431;29432 29425 6 AQLSVQTSPVPTPDPK Unmodified 1663.8781 0.87810054 327 O43426 SYNJ1 Synaptojanin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 61.153 61.436 2 1.935E-15 69519 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 103.75 85.006 12363000 0 0 0 0 0 0 2584000 0 0 4172500 0 0 0 0 5606200 4248 327 3833 37199;37200;37201;37202;37203 29433;29434;29435;29436;29437 29435 5 AQLVEEWANSVK Unmodified 1372.6987 0.69867961 4025 Q99574 SERPINI1 Neuroserpin yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 78.598 74.897 2 0.0079229 93363 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.102 56.579 91714000 0 87945000 3769700 0 0 0 0 0 0 0 0 0 0 0 0 4249 4025 3834 37204;37205 29438;29439 29438 0 AQLVEIVGCHFR Unmodified 1427.7344 0.73435361 499 O75446 SAP30 Histone deacetylase complex subunit SAP30 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 73.002 73.188 3 0.035479 83656 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 22.885 15.515 22212000 0 0 0 0 0 6074800 0 0 0 0 0 6302100 3287900 0 6547500 4250 499 3835 37206;37207;37208;37209 29440 29440 1 AQMSNFLASTTNQQEIASLDVK Unmodified 2395.1689 0.16893918 3688 Q92925 SMARCD2 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 yes yes 0 0 0 By MS/MS 3 0 1 1 86.448 83.226 3 0.001717 99756 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 47.808 44.755 6372800 0 6372800 0 0 0 0 0 0 0 0 0 0 0 0 0 4251 3688 3836 37210 29441 29441 0 AQMTNILQQIK Unmodified 1286.7017 0.70165649 3414 Q8ND24 RNF214 RING finger protein 214 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.368 76.426 2 0.0066986 87646 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.898 37.839 102300000 0 0 0 4046300 5118200 7347100 6214400 11921000 5535300 9368900 8605100 10083000 7206200 7374300 19475000 4252 3414 3837 37211;37212;37213;37214;37215;37216;37217;37218;37219;37220;37221;37222 29442;29443;29444;29445;29446;29447 29443 6 AQMVQEDLEK Oxidation (M) 1205.5598 0.55980286 1198 P26038 MSN Moesin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS 7.24 3.75 5 1 11 2 3 1 1 1 1 1 1 1 1 1 1 1 1 25.868 24.414 2 0.00010647 30550 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.12 101.34 440250000 66445000 246150000 1905100 8120400 3838000 4861400 4230200 0 3508700 3872500 23608000 16539000 8346200 10056000 38763000 4253 1198 3838 37223;37224;37225;37226;37227;37228;37229;37230;37231;37232;37233;37234;37235;37236;37237;37238;37239 29448;29449;29450;29451;29452;29453;29454;29455;29456;29457;29458;29459;29460 29451 1733 11 AQMVQEDLEK Unmodified 1189.5649 0.56488824 1198 P26038 MSN Moesin yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.65 3.66 1 3 1 12 3 2 1 1 1 1 1 1 1 1 1 1 1 1 36.312 35.237 2 8.6705E-05 44298 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.13 101.61 1362600000 63340000 948150000 0 7572700 6009800 8030000 7179600 6026000 7133900 10142000 49808000 30254000 13052000 41927000 163940000 4254 1198 3838 37240;37241;37242;37243;37244;37245;37246;37247;37248;37249;37250;37251;37252;37253;37254;37255;37256 29461;29462;29463;29464;29465;29466;29467;29468;29469;29470;29471 29462 11 AQNAESSLQQK Unmodified 1202.5891 0.58912916 3998 Q96T51 RUFY1 RUN and FYVE domain-containing protein 1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 12.541 12.367 2 0.0020767 11460 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 69.375 45.582 81967000 8430200 0 0 3191500 3478000 6780200 5522500 4660300 3927400 10196000 6674800 7427600 7826900 6725700 7125700 4255 3998 3839 37257;37258;37259;37260;37261;37262;37263;37264;37265;37266;37267;37268;37269 29472;29473;29474;29475;29476 29475 5 AQNDLIWNIK Unmodified 1213.6455 0.64552182 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 77.204 76.079 2 0.0024723 95050 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.46 127.46 779590000 18990000 475270000 9010400 7630500 8158800 28916000 12743000 14992000 21048000 22470000 30339000 26873000 20226000 25238000 57684000 4256 894 3840 37270;37271;37272;37273;37274;37275;37276;37277;37278;37279;37280;37281;37282;37283;37284;37285 29477;29478;29479;29480;29481;29482;29483;29484;29485;29486;29487;29488;29489;29490;29491;29492;29493 29480 15 AQNDLIWNIKDELK Unmodified 1698.8941 0.89408495 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 4 3.46 3 1 1 1 1 1 85.77 81.97 3 0.0001337 103501 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.69 79.551 74765000 6229700 60513000 2728000 0 0 0 0 0 0 0 0 0 0 0 5294000 4257 894 3841 37286;37287;37288;37289 29494;29495;29496 29494 3 AQNISSNANMLR Oxidation (M) 1333.6408 0.64084715 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 1 0 By MS/MS 10 0 1 1 27.069 27.414 2 0.02031 29439 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 52.49 34.178 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4258 2361 3842 37290 29497 29497 3843 1 AQNISSNANMLRK Unmodified 1445.7409 0.74089555 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 2 1 1 1 1 1 1 1 1 31.574 31.75 3 1.7909E-08 33520 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 113.61 103.56 242860000 0 0 0 12697000 18804000 20911000 27047000 17743000 18859000 18856000 26831000 25805000 16518000 15105000 23681000 4259 2361 3843 37291;37292;37293;37294;37295;37296;37297;37298;37299;37300;37301;37302;37303 29498;29499;29500;29501;29502;29503;29504;29505;29506;29507;29508;29509;29510 29506 12 AQNISSNANMLRK Oxidation (M) 1461.7358 0.73581017 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 1 1 By MS/MS By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 20.716 20.826 3 0.00051468 20902 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 60.161 50.318 63990000 0 0 0 0 13225000 0 11567000 11659000 9373900 0 18165000 0 0 0 0 4260 2361 3843 37304;37305;37306;37307;37308 29511 29511 3843 1 AQNKPFYVVAESFK Unmodified 1626.8406 0.84059282 2395 Q14232 EIF2B1 Translation initiation factor eIF-2B subunit alpha yes yes 0 0 1 By MS/MS 2 0 1 1 82.834 74.704 3 0.00039376 97737 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.885 51.595 15778000 15778000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4261 2395 3844 37309 29512 29512 1 AQNLNPMVDVK Oxidation (M) 1243.6231 0.62307182 4838 Q9UBE0 SAE1 SUMO-activating enzyme subunit 1;SUMO-activating enzyme subunit 1, N-terminally processed yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 40.289 40.526 2 0.00041509 44840 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 78.939 60.714 72987000 0 0 0 3096100 0 5837700 3246400 2725900 4380800 0 11907000 12667000 0 8946700 20179000 4262 4838 3845 37310;37311;37312;37313;37314;37315;37316;37317;37318;37319 29513;29514;29515;29516;29517;29518;29519;29520;29521;29522 29518 6206 8 AQNLNPMVDVK Unmodified 1227.6282 0.6281572 4838 Q9UBE0 SAE1 SUMO-activating enzyme subunit 1;SUMO-activating enzyme subunit 1, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 54.226 54.596 2 0.0067974 61897 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 55.649 44.783 62043000 0 0 0 0 0 0 0 0 0 0 19816000 18425000 8626900 15175000 0 4263 4838 3845 37320;37321;37322;37323 29523;29524;29525 29524 3 AQNLSAPITSASR Unmodified 1314.6892 0.68917755 2755 Q5SQI0 ATAT1 Alpha-tubulin N-acetyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 41.846 41.909 2 0.017648 47057 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 49.35 37.284 55535000 0 0 0 3514800 4499800 6783300 4094500 8882500 3963200 8475800 6843900 0 4591000 3886300 0 4264 2755 3846 37324;37325;37326;37327;37328;37329;37330;37331;37332;37333 29526;29527;29528;29529 29526 3 AQNSSGVMGGPQK Unmodified 1259.5928 0.59283433 3155 Q86UU0 BCL9L B-cell CLL/lymphoma 9-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.031 15.202 2 7.1059E-10 13952 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 140.75 98.645 102710000 0 0 0 4596200 3759400 3926500 5495800 4979700 5224100 9975200 10244000 11495000 14913000 11958000 16139000 4265 3155 3847 37334;37335;37336;37337;37338;37339;37340;37341;37342;37343;37344;37345 29530;29531;29532;29533;29534;29535;29536;29537;29538;29539;29540;29541 29533 12 AQNTWGCGNSLR Unmodified 1362.6099 0.60988137 757 P02545 LMNA Prelamin-A/C;Lamin-A/C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.998 37.178 2 0.00025852 41644 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 96.89 74.15 211080000 0 0 0 13330000 6202900 11388000 9427000 8396600 9515500 16883000 27414000 30748000 14330000 21619000 41820000 4266 757 3848 37346;37347;37348;37349;37350;37351;37352;37353;37354;37355;37356;37357 29542;29543;29544;29545;29546;29547;29548;29549;29550;29551;29552;29553;29554 29553 13 AQPAAETTDGER Unmodified 1244.5633 0.56330834 2295 Q13459 MYO9B Unconventional myosin-IXb yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 9.8244 9.9364 2 0.00088849 8954 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 73.067 68.126 29912000 0 0 0 2111900 1455000 2497300 3536200 2036900 1792500 2564200 0 3889600 3148000 3405000 3475400 4267 2295 3849 37358;37359;37360;37361;37362;37363;37364;37365;37366;37367;37368 29555;29556;29557;29558;29559;29560;29561;29562;29563;29564;29565;29566;29567 29555 13 AQPAITTGGSAAVLAGTIK Unmodified 1725.9625 0.96249887 3915 Q96L91 EP400 E1A-binding protein p400 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 76.244 75.939 2 8.5417E-06 93699 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.75 88.745 120500000 0 29326000 0 4974600 4901100 6955600 5937400 9802400 4916400 7378100 7952700 11667000 7451700 7783500 11456000 4268 3915 3850 37369;37370;37371;37372;37373;37374;37375;37376;37377;37378;37379;37380;37381 29568;29569;29570;29571;29572;29573;29574;29575;29576;29577 29570 10 AQPAQPADEPAEK Unmodified 1350.6416 0.64155866 1193 P25786 PSMA1 Proteasome subunit alpha type-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.53 3.84 2 3 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 21.87 21.69 2 6.1814E-21 92554 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 143.5 123.27 1122500000 326370000 47554000 2714800 35667000 17680000 29187000 28558000 25169000 18637000 38338000 112860000 93961000 43135000 87134000 215520000 4269 1193 3851 37382;37383;37384;37385;37386;37387;37388;37389;37390;37391;37392;37393;37394;37395;37396;37397;37398 29578;29579;29580;29581;29582;29583;29584;29585;29586;29587;29588;29589;29590;29591;29592;29593;29594;29595;29596 29587 18 AQPARPPPPAQPGEIGEAIAK Unmodified 2094.1222 0.12218741 597 O94875 SORBS2 Sorbin and SH3 domain-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 58.673 58.78 3 0.027121 66247 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 19.897 14.688 20817000 0 0 0 0 3363600 0 2821100 0 0 4427900 0 0 0 4472900 5731700 4270 597 3852 37399;37400;37401;37402;37403 29597 29597 0 AQPDDPESQMACHVFR Unmodified 1886.804 0.80396609 398 O60343 TBC1D4 TBC1 domain family member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 59.459 59.738 3 5.676E-11 67369 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.562 75.492 40717000 0 0 0 0 0 4409200 0 0 2887000 5622800 4592000 5958500 4443600 5196900 7607000 4271 398 3853 37404;37405;37406;37407;37408;37409;37410;37411 29598;29599;29600;29601;29602;29603;29604;29605 29599 8 AQPEEEDEDEVSMK Unmodified 1634.6618 0.66176133 2768 Q5T1M5 FKBP15 FK506-binding protein 15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.654 32.899 2 1.0396E-07 35853 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 114.86 114.86 63220000 0 0 0 0 2581000 7331100 4850900 0 2984400 7585200 7459700 8004000 4871400 6495500 11057000 4272 2768 3854 37412;37413;37414;37415;37416;37417;37418;37419;37420;37421;37422;37423 29606;29607;29608;29609;29610;29611;29612;29613;29614;29615;29616;29617 29611 12 AQPEEEDEDEVSMK Oxidation (M) 1650.6567 0.65667595 2768 Q5T1M5 FKBP15 FK506-binding protein 15 yes yes 0 1 0 By matching By MS/MS 10 0 2 1 1 21.491 21.58 2 0.014463 22500 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 50.284 42.063 6652600 0 0 0 2269400 0 0 0 0 0 0 0 0 4383300 0 0 4273 2768 3854 37424;37425 29618 29618 4395 0 AQPGPASQPDVSLQQR Acetyl (Protein N-term) 1719.854 0.85401105 2510 Q15276 RABEP1 Rab GTPase-binding effector protein 1 yes yes 1 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 56.7 57.29 2 3.4542E-05 64378 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.76 58.87 12564000 0 0 0 0 0 0 0 0 0 0 0 4321800 0 0 8242700 4274 2510 3855 37426;37427;37428 29619;29620 29619 2 AQPGPEVRIYDSNTGK Unmodified 1730.8588 0.85876208 5228 Q9Y5B0 CTDP1 RNA polymerase II subunit A C-terminal domain phosphatase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 48.967 43.147 3 0.02953 53951 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 34.277 24.489 33879000 7906300 20140000 5832600 0 0 0 0 0 0 0 0 0 0 0 0 4275 5228 3856 37429;37430;37431 29621 29621 1 AQPGTLNLNNEVVK Acetyl (Protein N-term) 1537.81 0.81002097 3424 Q8NEF9 SRFBP1 Serum response factor-binding protein 1 yes yes 1 0 0 By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 74.427 74.437 2 0.00010573 85963 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 78.342 65.386 49935000 0 0 0 3720500 5495100 4004600 0 3320400 3382100 5547700 6399400 12057000 6008300 0 0 4276 3424 3857 37432;37433;37434;37435;37436;37437;37438;37439;37440;37441 29622;29623;29624;29625;29626 29626 5 AQPGTTNYQRNK Unmodified 1376.6797 0.6796755 3593 Q8WXI7 MUC16 Mucin-16 yes yes 0 0 1 By MS/MS 2 0 1 1 10.048 6.2736 2 0.026224 10288 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.677 52.118 4043300 4043300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4277 3593 3858 37442 29627 29627 1 AQPGVSETEEVALQPLLTPK Unmodified 2106.1209 0.12085 4283 Q9C0B5 ZDHHC5 Palmitoyltransferase ZDHHC5 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 88.537 84.494 3 1.3904E-08 105148 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.357 73.62 26324000 0 26324000 0 0 0 0 0 0 0 0 0 0 0 0 0 4278 4283 3859 37443;37444 29628 29628 1 AQPLEDLAGLK Unmodified 1153.6343 0.63428844 1492 P46013 MKI67 Antigen KI-67 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 73.613 73.67 2 0.00027424 84841 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 90.906 65.284 345040000 0 0 0 22845000 21923000 24300000 24209000 0 23566000 38706000 37797000 45428000 26876000 27926000 51468000 4279 1492 3860 37445;37446;37447;37448;37449;37450;37451;37452;37453;37454;37455 29629;29630;29631;29632;29633;29634;29635;29636;29637;29638;29639;29640 29635 12 AQPLSLEELLAK Unmodified 1310.7446 0.74456717 4168 Q9BUQ8 DDX23 Probable ATP-dependent RNA helicase DDX23 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 88.732 88.257 2 0.00429 101933 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.887 64.698 498160000 0 329220000 6019700 0 8481800 11235000 9692900 11839000 10668000 19837000 16146000 16999000 9780100 15811000 32433000 4280 4168 3861 37456;37457;37458;37459;37460;37461;37462;37463;37464;37465;37466;37467;37468 29641;29642;29643;29644;29645;29646;29647;29648 29644 7 AQPPEAGPQGLHDLGR Unmodified 1641.8223 0.82231699 4 A0FGR8 ESYT2 Extended synaptotagmin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.603 47.765 3 1.6964E-08 54193 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 90.754 72.651 179580000 0 0 0 8401900 10333000 16343000 10575000 12261000 10236000 19029000 14573000 27437000 16739000 11643000 22005000 4281 4 3862 37469;37470;37471;37472;37473;37474;37475;37476;37477;37478;37479;37480 29649;29650;29651;29652;29653;29654;29655;29656;29657;29658;29659 29659 11 AQPPSSAASR Unmodified 970.48321 0.48320752 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.1823 7.3059 2 0.0017601 5136 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 88.819 55.022 690120000 0 0 0 40892000 43966000 50420000 54295000 56187000 58725000 45489000 117510000 57591000 49347000 52462000 63234000 4282 2102 3863 37481;37482;37483;37484;37485;37486;37487;37488;37489;37490;37491;37492 29660;29661;29662;29663;29664;29665;29666;29667;29668;29669;29670;29671;29672;29673 29661 14 AQPQDSATFAHTPPPAQATPAPGFK Unmodified 2532.2397 0.23973636 5057 Q9UPS6 SETD1B Histone-lysine N-methyltransferase SETD1B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 62.652 62.741 3 7.3051E-14 71645 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 44.258 37.146 147870000 0 0 0 7320900 10318000 8963100 11438000 15496000 8758900 13716000 18367000 30369000 0 10385000 12738000 4283 5057 3864 37493;37494;37495;37496;37497;37498;37499;37500;37501;37502;37503 29674;29675;29676;29677;29678;29679;29680;29681;29682;29683;29684;29685;29686;29687;29688;29689;29690 29678 17 AQPSASLGVGYR Unmodified 1204.62 0.62003536 3948 Q96PK6 RBM14 RNA-binding protein 14 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 44.526 44.868 2 0.00021096 49320 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 84.213 51.858 101050000 0 0 0 0 0 0 10714000 4277500 5399700 10254000 12315000 15260000 12482000 12416000 17930000 4284 3948 3865 37504;37505;37506;37507;37508;37509;37510;37511;37512;37513 29691;29692;29693;29694;29695;29696;29697;29698;29699;29700;29701;29702 29699 11 AQPSDNAPAK Unmodified 997.48287 0.48287317 162 O00499 BIN1 Myc box-dependent-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.25 2.49 1 11 1 1 1 1 1 1 1 1 1 1 1 1 14.95 15.498 2 0.0040832 92709 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 91.318 73.923 47784000 26633000 0 0 1186400 1762800 2126000 1683700 2229300 2056100 0 2314000 1709000 1466200 1301400 3316200 4285 162 3866 37514;37515;37516;37517;37518;37519;37520;37521;37522;37523;37524;37525 29703;29704;29705;29706;29707;29708;29709;29710;29711 29706 9 AQPSSSEDELDNVFFK Unmodified 1811.8214 0.82137352 2776 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching 8 3.46 1 3 1 1 1 1 82.113 81.014 2 4.7887E-07 100408 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.75 89.061 40774000 0 33236000 0 0 0 0 0 2696900 0 0 0 0 1933400 2907300 0 4286 2776 3867 37526;37527;37528;37529 29712;29713 29712 2 AQPSVSLGAAYR Unmodified 1218.6357 0.63568542 3948 Q96PK6 RBM14 RNA-binding protein 14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 51.324 51.335 2 0.0013207 58060 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 68.847 37.543 112320000 0 0 0 6811100 8461800 0 12924000 11781000 9607900 17369000 0 0 0 0 45361000 4287 3948 3868 37530;37531;37532;37533;37534;37535;37536;37537 29714;29715;29716;29717;29718;29719;29720;29721;29722 29719 9 AQPSVSLGAPYR Unmodified 1244.6513 0.65133548 3948 Q96PK6 RBM14 RNA-binding protein 14 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 53.333 53.6 2 0.00010668 60234 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 87.913 60.171 54188000 0 0 0 6995900 0 0 0 0 0 0 12207000 11949000 10422000 0 12614000 4288 3948 3869 37538;37539;37540;37541;37542;37543;37544 29723;29724;29725;29726;29727;29728 29728 6 AQPTPSSSATQSK Unmodified 1288.6259 0.62590859 1865 P61964 WDR5 WD repeat-containing protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 8.4458 8.5747 2 5.8973E-08 5966 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 101.39 80.422 99713000 0 0 0 5076500 5607800 6775000 5066100 3193500 6043800 7161300 20504000 12376000 9359300 7409100 11141000 4289 1865 3870 37545;37546;37547;37548;37549;37550;37551;37552;37553;37554;37555;37556 29729;29730;29731;29732;29733;29734;29735 29731 7 AQPTPSSSATQSKPTPVK Unmodified 1810.9425 0.94249171 1865 P61964 WDR5 WD repeat-containing protein 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 21.149 21.384 3 1.2436E-07 22067 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 69.522 63.49 248480000 0 0 0 9731600 10329000 19359000 0 21271000 0 25494000 38360000 30135000 21933000 25000000 46863000 4290 1865 3871 37557;37558;37559;37560;37561;37562;37563;37564;37565;37566;37567 29736;29737;29738;29739;29740;29741;29742;29743;29744;29745;29746;29747 29741 12 AQPTPSSSATQSKPTPVKPNYALK Unmodified 2497.3177 0.31765233 1865 P61964 WDR5 WD repeat-containing protein 5 yes yes 0 0 2 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 2 2 1 2 41.226 41.515 3;4 1.3813E-14 45647 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.981 67.106 226560000 0 0 0 14601000 4408300 0 3732900 0 6253900 23012000 22936000 47522000 28115000 21242000 54742000 4291 1865 3872 37568;37569;37570;37571;37572;37573;37574;37575;37576;37577;37578;37579;37580 29748;29749;29750;29751;29752;29753;29754;29755 29753 8 AQPTTLVLPPQYVDDVISR Unmodified 2111.1263 0.12626973 2926 Q6P2C8 MED27 Mediator of RNA polymerase II transcription subunit 27 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 90.24 90.384 2 0.0024528 104872 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 50.145 37.378 9341700 0 0 0 0 0 0 0 1393000 0 2631000 0 1467900 0 0 3849800 4292 2926 3873 37581;37582;37583;37584 29756;29757 29756 2 AQPVPHYGVPFKPQIPEAR Unmodified 2130.1374 0.13744354 5009 Q9ULW0 TPX2 Targeting protein for Xklp2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 72.536 72.661 4 0.0014563 83013 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.116 39.622 166130000 0 0 0 7486700 0 0 8909300 17430000 14510000 19157000 14115000 19607000 14966000 15190000 34761000 4293 5009 3874 37585;37586;37587;37588;37589;37590;37591;37592;37593;37594 29758;29759;29760;29761;29762;29763;29764;29765;29766 29761 8 AQPVQVAEGSEPDGFWEALGGK Unmodified 2271.0808 0.080776102 819 P06396 GSN Gelsolin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 2 1 2 2 1 2 2 87.234 87.355 2;3 5.1234E-08 101147 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.632 76.83 + 40239000 0 0 0 0 1729000 2362400 0 4453500 1639600 5911500 5175900 4141500 0 3635300 11190000 4294 819 3875 37595;37596;37597;37598;37599;37600;37601;37602;37603;37604;37605;37606;37607;37608 29767;29768;29769;29770;29771 29768 5 AQQAADK Acetyl (Protein N-term) 772.37153 0.37153181 1356 P35579 MYH9 Myosin-9 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.09 3.85 4 7 2 1 1 1 1 1 1 1 1 1 7.0883 6.8268 2 0.016857 3026 211201_C21_010_OE480_Thermo_Rev00_#21_059_input_rep1 68.915 48.055 438710000 410140000 1685100 1133600 2075900 0 4118300 3556700 4646700 5059400 0 3737900 0 2553900 0 0 4295 1356 3876 37609;37610;37611;37612;37613;37614;37615;37616;37617;37618;37619 29772;29773;29774 29772 3 AQQACIEAK Unmodified 1017.4913 0.49132937 5029 Q9UNE7 STUB1 E3 ubiquitin-protein ligase CHIP yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 12.208 12.503 2 0.012458 10804 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.429 51.926 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4296 5029 3877 37620;37621 29775;29776 29775 2 AQQALSELHTVEK Unmodified 1452.7573 0.75725712 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 2 1 1 1 1 2 2 1 2 2 2 42.648 42.847 2;3 2.9963E-09 47010 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 91.62 79.562 345820000 0 0 0 17985000 15312000 21305000 19563000 17895000 16735000 29591000 49863000 25530000 45966000 28143000 57934000 4297 2775 3878 37622;37623;37624;37625;37626;37627;37628;37629;37630;37631;37632;37633;37634;37635;37636;37637;37638;37639 29777;29778;29779;29780;29781;29782;29783;29784;29785;29786;29787;29788;29789;29790;29791;29792;29793 29788 16 AQQDQLVLIFAGK Unmodified 1429.7929 0.79291434 4609 Q9NRR5 UBQLN4 Ubiquilin-4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 86.745 86.813 2 0.0058496 100888 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 90.108 72.672 205550000 0 0 0 6176800 9571600 14877000 11063000 18157000 14606000 19915000 16041000 28629000 13985000 13894000 38632000 4298 4609 3879 37640;37641;37642;37643;37644;37645;37646;37647;37648;37649;37650;37651 29794;29795;29796;29797;29798 29797 2 AQQDVIMVLK Unmodified 1143.6322 0.63217995 1638 P50851 LRBA Lipopolysaccharide-responsive and beige-like anchor protein yes yes 0 0 0 By MS/MS 2 0 1 1 75.764 70.824 2 0.0049244 88711 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.308 72.469 35649000 0 35649000 0 0 0 0 0 0 0 0 0 0 0 0 0 4299 1638 3880 37652 29799 29799 1 AQQDVIMVLK Oxidation (M) 1159.6271 0.62709457 1638 P50851 LRBA Lipopolysaccharide-responsive and beige-like anchor protein yes yes 0 1 0 By MS/MS 10 0 1 1 58.876 59.078 2 0.00514 67511 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 61.582 44.342 5767600 0 0 0 0 0 0 0 0 0 0 0 0 5767600 0 0 4300 1638 3880 37653 29800 29800 2628 1 AQQEDALAQQAFEEAR Unmodified 1803.8388 0.83875492 2358 Q13951 CBFB Core-binding factor subunit beta yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 68.07 68.3 2 1.8228E-31 77901 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 168.31 159.8 37781000 0 0 0 0 0 2850500 2670100 0 0 5322400 6107100 6008000 0 5105800 9717300 4301 2358 3881 37654;37655;37656;37657;37658;37659;37660 29801;29802;29803;29804;29805;29806 29803 5 AQQEHQSLLEK Unmodified 1309.6626 0.66262845 5188 Q9Y496 KIF3A Kinesin-like protein KIF3A yes yes 0 0 0 By MS/MS 3 0 1 1 23.435 19.472 3 0.0067675 24442 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 45.764 22.015 9492800 0 9492800 0 0 0 0 0 0 0 0 0 0 0 0 0 4302 5188 3882 37661 29807 29807 1 AQQELEEQTR Unmodified 1230.584 0.58404378 1198 P26038 MSN Moesin yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 15.097 15.569 2 0.0011159 15065 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 126.07 115.36 39024000 0 0 0 0 0 0 0 0 0 0 0 10807000 0 0 28217000 4303 1198 3883 37662;37663;37664 29808;29809 29809 1 AQQELEEQTRR Unmodified 1386.6852 0.68515481 1198 P26038 MSN Moesin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 13.69 13.288 3 0.00010482 12127 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.88 91.684 661680000 0 47934000 0 17931000 12671000 16362000 14792000 11097000 9947200 0 77371000 84917000 26377000 66099000 276180000 4304 1198 3884 37665;37666;37667;37668;37669;37670;37671;37672;37673;37674;37675;37676;37677 29810;29811;29812;29813;29814;29815;29816;29817;29818;29819;29820 29814 10 AQQELVPPQQQASPPQLPK Unmodified 2083.1062 0.10620299 242 O15027 SEC16A Protein transport protein Sec16A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 67.095 67.384 3 0.0030573 77212 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 20.625 12.235 23726000 0 0 0 0 0 0 0 0 0 0 5662000 0 5321600 6097200 6645600 4305 242 3885 37678;37679;37680;37681 29821;29822;29823 29822 3 AQQEQAAHQASLRK Unmodified 1564.807 0.80700128 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 6 22 3 1 2 2 2 2 2 2 2 2 2 2 1 2 1 8.4216 7.8114 2;3;4 3.212E-12 5496 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 101.3 93.793 513860000 257330000 3016200 15871000 5177800 6352300 9486200 11849000 11474000 9341400 20654000 62424000 39653000 13850000 21443000 25933000 4306 645 3886 37682;37683;37684;37685;37686;37687;37688;37689;37690;37691;37692;37693;37694;37695;37696;37697;37698;37699;37700;37701;37702;37703;37704;37705;37706;37707;37708;37709 29824;29825;29826;29827;29828;29829;29830;29831;29832;29833;29834;29835;29836;29837;29838;29839;29840;29841 29833 16 AQQEQELAADAFK Unmodified 1447.6943 0.69432251 996 P14314 PRKCSH Glucosidase 2 subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.9 3.96 2 5 1 13 3 4 1 1 1 2 1 1 1 1 1 1 1 1 1 59.72 58.038 2;3 1.8245E-26 62283 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 164.43 130.7 1868000000 117000000 1083400000 3296400 25657000 23379000 24601000 28633000 34441000 25708000 34002000 106610000 97030000 0 72202000 192090000 4307 996 3887 37710;37711;37712;37713;37714;37715;37716;37717;37718;37719;37720;37721;37722;37723;37724;37725;37726;37727;37728;37729;37730 29842;29843;29844;29845;29846;29847;29848;29849;29850;29851;29852;29853;29854;29855;29856;29857;29858;29859;29860;29861;29862 29843 20 AQQETGEREASCRDK Unmodified 1763.7857 0.78567349 3197 Q86XL3 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 0 0 2 By MS/MS 2 0 1 1 5.8193 3.6142 3 0.032498 5295 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 53.001 46.969 10667000 0 0 10667000 0 0 0 0 0 0 0 0 0 0 0 0 4308 3197 3888 37731 29863 29863 1 AQQGEVMR Oxidation (M) 933.43381 0.43381449 4491 Q9HAV4 XPO5 Exportin-5 yes yes 0 1 0 By matching By MS/MS By MS/MS By matching By matching By matching 10 0 6 1 1 1 1 1 1 5.709 5.7287 2 0.03517 3561 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 45.718 7.4798 10503000 0 0 0 1537500 900000 3310400 2248400 1262700 1244100 0 0 0 0 0 0 4309 4491 3889 37732;37733;37734;37735;37736;37737 29864 29864 1 AQQGEVMR Unmodified 917.4389 0.43889987 4491 Q9HAV4 XPO5 Exportin-5 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 8.7281 9.0289 2 0.03661 7143 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 51.787 31.228 5419700 0 0 0 0 0 0 0 0 0 0 4380900 0 0 1038900 0 4310 4491 3889 37738;37739 29865 29865 1 AQQGIVFLDEVDK Unmodified 1460.7511 0.75110911 573 O76031 CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 80.437 80.368 2 3.6576E-09 93350 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 113.47 83.218 34554000 0 0 0 5042100 5280400 9877700 7871800 0 6481500 0 0 0 0 0 0 4311 573 3890 37740;37741;37742;37743;37744 29866;29867;29868 29868 2 AQQGLYQVPGPSPQFQSPPAK Unmodified 2224.1277 0.12766671 1788 P56945 BCAR1 Breast cancer anti-estrogen resistance protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 73.738 73.23 3 7.9696E-09 90117 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.362 73.331 118840000 0 26078000 0 6950200 7131800 0 0 7665400 7650100 0 13363000 0 8271800 20400000 21331000 4312 1788 3891 37745;37746;37747;37748;37749;37750;37751;37752;37753 29869;29870;29871;29872;29873;29874;29875;29876;29877 29870 9 AQQGNEALDEICFK Unmodified 1621.7406 0.74062078 3034 Q75QN2 INTS8 Integrator complex subunit 8 yes yes 0 0 0 By MS/MS 2 0 1 1 74.929 69.861 2 3.8453E-09 87507 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.02 122.59 28730000 0 28730000 0 0 0 0 0 0 0 0 0 0 0 0 0 4313 3034 3892 37754 29878 29878 1 AQQIHSQTSQQYPLYDLDLGK Unmodified 2432.1972 0.19720284 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 77.009 76.348 3 3.9879E-59 87923 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 129.32 115.31 1047000000 0 188690000 3902800 90862000 33543000 53216000 35098000 227120000 45221000 59402000 60368000 83405000 68177000 38383000 59607000 4314 1029 3893 37755;37756;37757;37758;37759;37760;37761;37762;37763;37764;37765;37766;37767;37768;37769 29879;29880;29881;29882;29883;29884;29885;29886;29887;29888;29889;29890;29891;29892;29893;29894 29880 16 AQQLAEVEVK Unmodified 1113.603 0.60298831 2444 Q14764 MVP Major vault protein yes yes 0 0 0 By MS/MS 2 0 1 1 44.651 39.432 2 0.00031982 51339 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.5 84.406 32433000 0 32433000 0 0 0 0 0 0 0 0 0 0 0 0 0 4315 2444 3894 37770 29895;29896 29896 2 AQQLEEARLQEEEQK Unmodified 1827.8963 0.8962698 5009 Q9ULW0 TPX2 Targeting protein for Xklp2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 6 4 2 2 1 1 1 1 37.028 34.975 3 5.1725E-05 45477 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.753 65.43 44961000 0 17309000 11845000 0 0 0 0 8172600 7635000 0 0 0 0 0 0 4316 5009 3895 37771;37772;37773;37774 29897;29898;29899;29900;29901;29902 29899 6 AQQLLDAVEQR Unmodified 1269.6677 0.66771383 3010 Q6ZSJ8 C1orf122 Uncharacterized protein C1orf122 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 57.953 58.065 2 0.00028579 66017 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 121.73 100.83 125850000 0 0 0 8372500 8664900 9297000 7916400 0 8465800 10928000 11569000 17354000 11844000 8763200 22673000 4317 3010 3896 37775;37776;37777;37778;37779;37780;37781;37782;37783;37784;37785;37786 29903;29904;29905;29906;29907;29908;29909;29910;29911;29912;29913;29914;29915 29904 13 AQQLREEQQR Unmodified 1284.6535 0.65346075 2501 Q15149 PLEC Plectin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 7.0057 7.1283 3 0.0055927 4963 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 60.342 30.809 128970000 0 0 0 10613000 7803500 8858900 11390000 6987800 10801000 15785000 23236000 0 8894200 7854400 16745000 4318 2501 3897 37787;37788;37789;37790;37791;37792;37793;37794;37795;37796;37797 29916;29917;29918 29918 1 AQQLSITSK Unmodified 974.53966 0.53965977 3151 Q86UP2 KTN1 Kinectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 27.071 27.521 2 0.05023 28526 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 42.075 18.499 9025500 0 0 0 0 0 0 0 0 0 0 0 0 2832800 2542700 3650000 4319 3151 3898 37798;37799;37800 29919 29919 1 AQQPAAELMQDTR Unmodified 1457.6933 0.69327665 2204 Q12899 TRIM26 Tripartite motif-containing protein 26 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 52.505 52.137 2 0.00028506 58862 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 82.171 69.381 11971000 0 0 0 2564100 3737300 5670000 0 0 0 0 0 0 0 0 0 4320 2204 3899 37801;37802;37803;37804;37805 29920;29921;29922;29923 29920 4 AQQPQQPSQEK Unmodified 1267.6157 0.61567826 3532 Q8WTW3 COG1 Conserved oligomeric Golgi complex subunit 1 yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 15.24 12.417 3 0.042956 16332 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 48.981 31.955 39042000 0 38279000 763300 0 0 0 0 0 0 0 0 0 0 0 0 4321 3532 3900 37806;37807 29924 29924 0 AQQQEEQGSVNDVK Unmodified 1558.7223 0.72232817 5211 Q9Y4W2 LAS1L Ribosomal biogenesis protein LAS1L yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 14.836 15.007 2 2.0619E-32 13802 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 199.03 171.7 62665000 0 0 0 4275500 1618700 6265900 3229900 0 4296400 5452600 5312800 5152000 8924200 7433600 10704000 4322 5211 3901 37808;37809;37810;37811;37812;37813;37814;37815;37816;37817;37818 29925;29926;29927;29928;29929;29930;29931;29932;29933;29934;29935 29929 11 AQQQEEQGSVNDVKEEEK Unmodified 2073.9451 0.94507048 5211 Q9Y4W2 LAS1L Ribosomal biogenesis protein LAS1L yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 20.441 20.019 3 1.8943E-38 20496 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 133.9 122.86 206440000 0 11662000 0 10682000 14334000 0 13692000 11343000 6368900 23005000 22409000 24061000 22826000 20091000 25963000 4323 5211 3902 37819;37820;37821;37822;37823;37824;37825;37826;37827;37828;37829;37830;37831 29936;29937;29938;29939;29940;29941;29942;29943;29944;29945;29946;29947;29948 29942 13 AQQQLEQEFNQK Unmodified 1489.7161 0.71612058 2510 Q15276 RABEP1 Rab GTPase-binding effector protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 40.127 40.881 2 0.0014735 45289 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 107.21 64.122 7450700 0 0 0 0 0 0 0 0 0 0 0 7450700 0 0 0 4324 2510 3903 37832;37833;37834 29949;29950;29951 29950 3 AQQQMTSSQK Acetyl (Protein N-term) 1177.5397 0.53973612 3028 Q712K3 UBE2R2 Ubiquitin-conjugating enzyme E2 R2 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 15.624 15.431 2 0.00013641 15335 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 137.14 120.17 103280000 3587700 0 0 5233600 0 7653200 5312000 4963000 0 9702600 12525000 11920000 10425000 12163000 19797000 4325 3028 3904 37835;37836;37837;37838;37839;37840;37841;37842;37843;37844;37845 29952;29953;29954;29955;29956;29957;29958;29959;29960 29952 9 AQQQMTSSQK Acetyl (Protein N-term);Oxidation (M) 1193.5347 0.53465075 3028 Q712K3 UBE2R2 Ubiquitin-conjugating enzyme E2 R2 yes yes 1 1 0 By MS/MS By MS/MS By matching By matching By MS/MS 10 0 5 1 1 1 1 1 6.3015 6.3783 2 0.0024452 4447 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 48.283 29.552 6476500 0 0 0 0 827520 1262500 0 1472400 976610 0 0 0 1937500 0 0 4326 3028 3904 37846;37847;37848;37849;37850 29961 29961 4643 1 AQQSYERLDNDTNATK Unmodified 1852.8551 0.85513326 2766 Q5T0N5 FNBP1L Formin-binding protein 1-like yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.3 2.1 1 9 1 1 1 1 1 1 1 1 1 1 25.811 25.589 3 0.0018485 27227 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 46.89 30.491 97414000 0 5496600 0 0 5213500 12082000 9678800 0 4882200 7179100 16427000 14907000 0 7859800 13688000 4327 2766 3905 37851;37852;37853;37854;37855;37856;37857;37858;37859;37860 29962;29963;29964;29965;29966;29967 29964 5 AQQVAVQEQEIARR Unmodified 1624.8645 0.86451616 565 O75955 FLOT1 Flotillin-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 35.031 35.206 3 0.0012196 38714 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 42.317 30.843 71831000 0 0 0 5527000 3283700 0 5155500 7233800 0 8784600 0 12494000 10868000 7120200 11365000 4328 565 3906 37861;37862;37863;37864;37865;37866;37867;37868;37869 29968;29969;29970;29971;29972;29973;29974;29975;29976;29977 29968 10 AQQVSQGLDVLTAK Unmodified 1456.7886 0.78855725 1073 P18206 VCL Vinculin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 66.264 64.658 2;3 4.6513E-34 82156 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 156.51 127.03 2225600000 37550000 1648300000 4316000 36726000 16378000 47424000 24879000 23377000 15687000 40744000 62556000 68602000 29691000 44741000 124640000 4329 1073 3907 37870;37871;37872;37873;37874;37875;37876;37877;37878;37879;37880;37881;37882;37883;37884;37885;37886 29978;29979;29980;29981;29982;29983;29984;29985;29986;29987;29988;29989;29990;29991;29992;29993;29994;29995;29996 29982 18 AQRAFPNPYADYNK Acetyl (Protein N-term) 1695.8005 0.80051892 370 O43813 LANCL1 LanC-like protein 1 yes yes 1 0 1 By MS/MS 2.5 0.5 1 1 2 70.989 65.81 2 1.599E-11 83713 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.34 107.93 63261000 0 63261000 0 0 0 0 0 0 0 0 0 0 0 0 0 4330 370 3908 37887;37888 29997;29998 29997 1 AQREQAIR Unmodified 970.53083 0.53082642 2006 P83731 RPL24 60S ribosomal protein L24 yes yes 0 0 1 By MS/MS 2 0 1 1 7.4744 3.9593 2 0.028197 7236 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.01 59.433 26843000 26843000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4331 2006 3909 37889 29999 29999 0 AQREQAIRAAK Unmodified 1240.7 0.70001701 2006 P83731 RPL24 60S ribosomal protein L24 yes yes 0 0 2 By MS/MS 2 0 1 1 9.6182 5.8435 3 0.014634 9717 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.694 43.3 29886000 29886000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4332 2006 3910 37890 30000 30000 0 AQRHSDSSLEEK Acetyl (Protein N-term) 1427.6641 0.66408501 2819 Q5VV41 ARHGEF16 Rho guanine nucleotide exchange factor 16 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 13.152 9.9595 3 0.00098249 13170 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.088 38.97 36856000 5753600 20414000 10689000 0 0 0 0 0 0 0 0 0 0 0 0 4333 2819 3911 37891;37892;37893 30001;30002;30003;30004 30001 4 AQRLFDANK Unmodified 1061.5618 0.56179219 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS 2 0 1 1 30.289 24.57 2 0.014999 34656 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 146.69 108.56 95116000 95116000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4334 2047 3912 37894 30005 30005 0 AQSAGTVRSAAPPQEK Unmodified 1596.822 0.82198264 1113 P20810 CAST Calpastatin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 20.471 16.717 3 0.00027505 22138 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.006 57.869 716900000 512020000 165990000 38893000 0 0 0 0 0 0 0 0 0 0 0 0 4335 1113 3913 37895;37896;37897;37898 30006;30007;30008;30009;30010;30011;30012;30013;30014;30015;30016 30007 11 AQSGPVRSGPK Unmodified 1082.5833 0.58325592 2055 Q01518 CAP1 Adenylyl cyclase-associated protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 7.3653 4.3734 2 2.9391E-17 7689 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 179.72 139.72 696730000 593770000 41221000 61736000 0 0 0 0 0 0 0 0 0 0 0 0 4336 2055 3914 37899;37900;37901 30017;30018;30019 30018 3 AQSINITELNLPQLEMLK Acetyl (Protein N-term);Oxidation (M) 2112.1137 0.11365613 4013 Q99471 PFDN5 Prefoldin subunit 5 yes yes 1 1 0 By MS/MS By MS/MS 1.5 0.5 1 1 1 1 102.33 102.59 3 5.5903E-12 116452 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.67 89.385 46745000 11076000 35669000 0 0 0 0 0 0 0 0 0 0 0 0 0 4337 4013 3915 37902;37903 30020;30021 30020 5508 2 AQSINITELNLPQLEMLK Acetyl (Protein N-term) 2096.1187 0.11874151 4013 Q99471 PFDN5 Prefoldin subunit 5 yes yes 1 0 0 By MS/MS 2 0 2 2 100.36 95.65 2;3 2.7083E-55 118217 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 149.57 126.52 122300000 0 122300000 0 0 0 0 0 0 0 0 0 0 0 0 0 4338 4013 3915 37904;37905 30022;30023 30022 1 AQSIPARK Unmodified 869.5083 0.50830006 4871 Q9UEE9 CFDP1 Craniofacial development protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 8.9594 5.8738 2 0.021814 9996 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.63 88.011 64354000 50330000 8044300 5980300 0 0 0 0 0 0 0 0 0 0 0 0 4339 4871 3916 37906;37907;37908 30024 30024 0 AQSLAEQTSDTAGLESSTR Unmodified 1950.913 0.91304207 2221 Q12986 NFX1 Transcriptional repressor NF-X1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.552 46.718 2 3.401E-25 53340 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 128.9 109.69 48813000 0 0 0 2173800 3331500 4757100 4092100 2654400 3301100 3572900 4006100 5751500 4988600 3311300 6872600 4340 2221 3917 37909;37910;37911;37912;37913;37914;37915;37916;37917;37918;37919;37920 30025;30026;30027;30028;30029;30030;30031;30032;30033;30034;30035 30034 11 AQSLEPYGTGLR Unmodified 1290.6568 0.65681479 2839 Q63ZY3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 51.508 51.732 2 0.0013829 57784 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 68.335 48.549 214570000 0 0 0 11792000 0 0 14725000 16653000 18950000 19573000 26759000 33255000 24669000 20734000 27459000 4341 2839 3918 37921;37922;37923;37924;37925;37926;37927;37928;37929;37930 30036;30037;30038;30039;30040;30041;30042;30043;30044 30043 9 AQSLPQPQQQPPPAHK Unmodified 1750.9115 0.91146635 5202 Q9Y4G8 RAPGEF2 Rap guanine nucleotide exchange factor 2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 34.88 30.231 3 0.0041201 39570 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 45.614 39.177 14064000 0 14064000 0 0 0 0 0 0 0 0 0 0 0 0 0 4342 5202 3919 37931;37932 30045;30046 30046 2 AQSLVISPPAPSPR Unmodified 1418.7882 0.78816332 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 65.498 65.576 2 1.9537E-17 75062 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 124.42 106.6 45203000 0 0 0 2802100 2920200 3189500 3725600 4385200 2902500 4038200 6056600 6926100 3602300 0 4654800 4343 1492 3920 37933;37934;37935;37936;37937;37938;37939;37940;37941;37942;37943 30047;30048;30049;30050;30051;30052;30053;30054;30055;30056;30057;30058;30059 30052 13 AQSMLVEQSEK Unmodified 1248.602 0.60200203 2992 Q6XUX3 DSTYK Dual serine/threonine and tyrosine protein kinase yes yes 0 0 0 By MS/MS 2 0 1 1 34.315 29.558 2 0.00060971 38719 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.044 82.163 10870000 0 10870000 0 0 0 0 0 0 0 0 0 0 0 0 0 4344 2992 3921 37944 30060;30061 30060 2 AQSNPYYNGPHLNLK Unmodified 1714.8427 0.84271808 3573 Q8WWI1 LMO7 LIM domain only protein 7 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.991 59.102 3 0.0042744 67112 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 37.013 18.875 103420000 0 0 0 3181400 4218400 8336100 5025400 7091300 7902800 9954900 10789000 13213000 9587800 9107100 15009000 4345 3573 3922 37945;37946;37947;37948;37949;37950;37951;37952;37953;37954;37955;37956 30062;30063;30064;30065;30066;30067;30068;30069;30070 30062 8 AQSQLLVPEQK Unmodified 1239.6823 0.68230126 2066 Q01968 OCRL Inositol polyphosphate 5-phosphatase OCRL-1 yes yes 0 0 0 By MS/MS By matching By MS/MS 7.33 3.77 1 2 1 1 1 55.378 52.747 2 0.020181 48136 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.066 43.038 28021000 16337000 0 0 0 2814400 0 0 0 0 0 0 0 0 0 8869200 4346 2066 3923 37957;37958;37959 30071;30072 30071 2 AQSQLVAGIK Unmodified 1013.5869 0.58694431 2586 Q15828 CST6 Cystatin-M yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 40.886 41.048 2 0.0014119 45723 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 91.318 69.358 121490000 0 0 0 33238000 6784900 9207800 7791700 19025000 3536300 6046700 9568600 11949000 0 6629100 7714300 4347 2586 3924 37960;37961;37962;37963;37964;37965;37966;37967;37968;37969;37970 30073;30074;30075;30076;30077;30078;30079;30080;30081;30082 30078 10 AQSQTDRVDLGTLR Unmodified 1558.8063 0.80633258 754 P01891;P10316 HLA-A HLA class I histocompatibility antigen, A-68 alpha chain;HLA class I histocompatibility antigen, A-69 alpha chain no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.125 46.293 3 3.5018E-05 51896 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 67.136 57.357 300450000 0 0 0 16521000 23938000 22478000 16078000 24215000 14523000 30217000 31473000 37835000 35943000 21845000 25385000 4348 754 3925 37971;37972;37973;37974;37975;37976;37977;37978;37979;37980;37981;37982 30083;30084;30085;30086;30087;30088;30089;30090;30091;30092;30093;30094;30095 30089 12 AQSSGPEHPGPESSLPSGALSK Unmodified 2119.0182 0.018175845 4453 Q9H8N7 ZNF395 Zinc finger protein 395 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 49.057 48.141 3 6.7902E-05 53304 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.953 36.021 54516000 0 12986000 0 0 0 5889900 0 2888900 4460500 6305300 7664900 8076000 0 0 6243900 4349 4453 3926 37983;37984;37985;37986;37987;37988;37989;37990;37991 30096;30097;30098;30099 30097 4 AQSSLGYIPLMR Oxidation (M) 1350.6966 0.69657112 4273 Q9BZL6 PRKD2 Serine/threonine-protein kinase D2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 70.461 70.563 2 0.011064 81049 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 42.338 20.801 22905000 0 0 0 0 3040100 0 0 0 1860800 3974700 5341900 5215600 0 3472000 0 4350 4273 3927 37992;37993;37994;37995;37996;37997 30100 30100 5731 1 AQSSQDAVSSMNLFDLGGQYLR Oxidation (M) 2402.1172 0.11723796 4912 Q9UHX1 PUF60 Poly(U)-binding-splicing factor PUF60 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 2 1 1 1 1 88.329 88.378 2;3 1.1791E-33 102478 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 101.36 88.479 102120000 0 0 0 2204700 1655900 1199200 0 7609800 0 34447000 13524000 3576200 0 8100000 29799000 4351 4912 3928 37998;37999;38000;38001;38002;38003;38004;38005;38006;38007 30101;30102;30103;30104;30105;30106 30102 6266 6 AQSSQDAVSSMNLFDLGGQYLR Unmodified 2386.1223 0.12232334 4912 Q9UHX1 PUF60 Poly(U)-binding-splicing factor PUF60 yes yes 0 0 0 By MS/MS 10 0 2 2 93.564 93.705 2;3 7.0863E-05 108660 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.201 42.218 4107000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4107000 4352 4912 3928 38008;38009 30107;30108;30109 30109 3 AQSVSPVQAPPPGGSAQLLPGK Unmodified 2085.1219 0.12185306 3968 Q96RK0 CIC Protein capicua homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 71.047 71.065 3 0.0048848 82155 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 27.904 19.817 33624000 0 0 0 2433600 2623000 3289800 4235400 2140800 2973700 3473600 0 3970100 3482600 5001200 0 4353 3968 3929 38010;38011;38012;38013;38014;38015;38016;38017;38018;38019 30110;30111 30111 2 AQSVSQINHK Unmodified 1110.5782 0.57817054 4525 Q9HD26 GOPC Golgi-associated PDZ and coiled-coil motif-containing protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 4.25 3.34 2 1 1 1 1 1 1 9.9624 7.6757 2 1.4507E-06 11740 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 151.04 88.318 142750000 130680000 6918600 3126200 0 0 0 0 0 0 0 0 0 0 0 2028700 4354 4525 3930 38020;38021;38022;38023 30112;30113;30114;30115 30114 4 AQSYEYVYRCIK Unmodified 1578.7501 0.75006325 3159 Q86V21 AACS Acetoacetyl-CoA synthetase yes yes 0 0 1 By MS/MS By matching 2 0 2 1 1 62.487 55.41 3 0.026331 74816 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 35.594 26.061 17951000 12004000 5947000 0 0 0 0 0 0 0 0 0 0 0 0 0 4355 3159 3931 38024;38025 30116 30116 1 AQTAHIVLEDGTK Unmodified 1381.7201 0.72014333 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.9 3.81 6 2 12 2 4 2 1 1 1 1 2 2 1 1 2 37.677 35.881 2;3 8.2692E-104 47780 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 229.75 184.07 788520000 79070000 368360000 96849000 13662000 0 15566000 0 0 3324500 16937000 34514000 40006000 31603000 27073000 61556000 4356 1300 3932 38026;38027;38028;38029;38030;38031;38032;38033;38034;38035;38036;38037;38038;38039;38040;38041;38042;38043;38044;38045 30117;30118;30119;30120;30121;30122;30123;30124;30125;30126;30127;30128;30129;30130 30121 12 AQTEGINISEEALNHLGEIGTK Unmodified 2323.1656 0.16556836 5086 Q9Y265 RUVBL1 RuvB-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 83.175 83.314 3 3.8879E-54 96114 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 114.63 107.01 237220000 0 0 0 0 0 7137800 4080500 9608100 9134700 37903000 31001000 17778000 3803500 15109000 101670000 4357 5086 3933 38046;38047;38048;38049;38050;38051;38052;38053;38054;38055 30131;30132;30133;30134;30135;30136 30131 5 AQTLPTSVVTITSESSPGK Unmodified 1901.9946 0.99458686 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 75.065 74.76 2 2.7995E-64 92108 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 141 133.97 236610000 0 46844000 0 5492400 8928900 15401000 10521000 10306000 9209300 19693000 22036000 25145000 10452000 20085000 32499000 4358 2047 3934 38056;38057;38058;38059;38060;38061;38062;38063;38064;38065;38066;38067;38068 30137;30138;30139;30140;30141;30142;30143;30144;30145;30146;30147;30148;30149;30150 30140 14 AQTLPTSVVTITSESSPGKR Unmodified 2058.0957 0.095697884 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 68.434 68.706 3 0.0001493 78823 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 47.392 38.228 16439000 0 0 0 0 0 0 5110700 0 0 0 0 11328000 0 0 0 4359 2047 3935 38069;38070 30151;30152 30152 2 AQTMSNSGIK Oxidation (M) 1051.4968 0.49680868 2205 Q12904 AIMP1 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1;Endothelial monocyte-activating polypeptide 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 5.9475 6.0602 2 0.00057464 3254 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 118.33 106.61 51295000 0 0 0 1918100 2052600 3207900 4370800 3234000 0 5160800 5980900 6276300 4819600 5865000 8409000 4360 2205 3936 38071;38072;38073;38074;38075;38076;38077;38078;38079;38080;38081 30153;30154;30155;30156;30157;30158;30159 30156 3586 7 AQTMSNSGIK Unmodified 1035.5019 0.50189405 2205 Q12904 AIMP1 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1;Endothelial monocyte-activating polypeptide 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 13.746 13.848 2 0.011912 12299 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 53.404 39.418 74761000 0 0 0 2991200 6105500 7770400 7455000 0 4428100 8969700 16075000 0 10460000 10506000 0 4361 2205 3936 38082;38083;38084;38085;38086;38087;38088;38089;38090 30160 30160 1 AQTPAFDKPK Acetyl (Protein N-term) 1143.5924 0.59242362 736 P00813 ADA Adenosine deaminase yes yes 1 0 1 By MS/MS 2 0 1 1 40.478 35.426 2 0.043005 46173 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 46.334 29.663 43061000 0 43061000 0 0 0 0 0 0 0 0 0 0 0 0 0 4362 736 3937 38091 30161 30161 1 AQTPPGPSLSGSK Unmodified 1225.6303 0.63026569 5066 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 30.635 30.826 2 0.0006406 33827 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 74.841 52.101 78896000 0 0 0 5884800 5215600 5320700 5097300 0 4872000 8025000 7732800 12429000 7722100 7863500 8733100 4363 5066 3938 38092;38093;38094;38095;38096;38097;38098;38099;38100;38101;38102 30162;30163;30164;30165;30166;30167;30168;30169;30170;30171;30172;30173 30162 12 AQTPVPGK Unmodified 796.4443 0.44430282 3693 Q92974 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 12.722 12.893 2 0.018051 11653 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 64.757 28.201 211720000 0 0 0 14646000 19741000 23447000 0 19136000 0 19668000 21527000 27317000 24383000 17502000 24348000 4364 3693 3939 38103;38104;38105;38106;38107;38108;38109;38110;38111;38112 30174;30175;30176 30174 3 AQTSLESQFTDRYPDNLK Unmodified 2112.0124 0.012362185 4789 Q9P031 CCDC59 Thyroid transcription factor 1-associated protein 26 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 68.21 68.174 3 0.00042916 78419 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.495 46.286 7074300 0 0 0 0 0 7074300 0 0 0 0 0 0 0 0 0 4365 4789 3940 38113;38114;38115 30177;30178;30179;30180 30177 4 AQTVDTEIAK Unmodified 1074.5557 0.55570376 3524 Q8TF05 PPP4R1 Serine/threonine-protein phosphatase 4 regulatory subunit 1 yes yes 0 0 0 By MS/MS 10 0 1 1 26.129 26.81 2 0.010197 27787 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.432 7.8703 7611900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7611900 4366 3524 3941 38116 30181 30181 1 AQTVTDSMFAVASK Unmodified 1454.7075 0.70752973 354 O43683 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching 10 0 7 1 1 1 1 1 1 1 68.212 68.331 2 0.0028798 78546 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 49.632 37.572 24516000 0 0 0 0 1957300 0 2776100 2442500 0 4591500 5538700 4242400 0 2967900 0 4367 354 3942 38117;38118;38119;38120;38121;38122;38123 30182;30183;30184 30182 3 AQTYELQESNVQLK Unmodified 1649.8261 0.82606496 4799 Q9P0V9 SEPT10 Septin-10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 2 57.506 57.633 2 7.5548E-19 65336 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 125.72 107.55 39148000 0 0 0 4910700 0 0 0 7865600 0 0 15455000 0 0 0 10917000 4368 4799 3943 38124;38125;38126;38127;38128;38129;38130 30185;30186;30187;30188;30189;30190;30191 30187 7 AQTYLGIEK Unmodified 1021.5444 0.5444108 1517 P46939 UTRN Utrophin yes yes 0 0 0 By MS/MS 2 0 1 1 48.927 43.28 2 0.028352 56317 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.016 26.587 25219000 0 25219000 0 0 0 0 0 0 0 0 0 0 0 0 0 4369 1517 3944 38131 30192 30192 1 AQVADVVVSR Unmodified 1042.5771 0.57710791 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 40.146 40.455 2 0.0025341 45322 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 82.645 48.392 305790000 0 0 0 0 0 75124000 0 0 0 80348000 0 79595000 0 70726000 0 4370 1565 3945 38132;38133;38134;38135 30193;30194;30195;30196;30197;30198 30194 6 AQVALTEYVR Unmodified 1148.619 0.61897272 922 P10588 NR2F6 Nuclear receptor subfamily 2 group F member 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 62.487 62.537 2 0.0019707 71993 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 87.308 47.685 52936000 0 0 0 2920300 4514400 5893300 4651900 0 4766900 5991000 6634900 0 4231000 6036300 7296300 4371 922 3946 38136;38137;38138;38139;38140;38141;38142;38143;38144;38145;38146 30199;30200;30201;30202;30203;30204;30205;30206;30207;30208 30208 10 AQVAMSTLPVEDEESSESR Acetyl (Protein N-term);Oxidation (M) 2121.9372 0.93720791 1977 P78347 GTF2I General transcription factor II-I yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 25 2 2 2 2 2 2 2 2 2 3 2 2 69.907 69.984 2;3 9.0715E-51 80129 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 140.1 138.27 815680000 0 0 0 62015000 61106000 65962000 64210000 36972000 41508000 76370000 68894000 109580000 88644000 70240000 70182000 4372 1977 3947 38147;38148;38149;38150;38151;38152;38153;38154;38155;38156;38157;38158;38159;38160;38161;38162;38163;38164;38165;38166;38167;38168;38169;38170;38171 30209;30210;30211;30212;30213;30214;30215;30216;30217;30218;30219;30220;30221;30222;30223;30224;30225;30226;30227;30228;30229;30230;30231;30232;30233 30229 3180 20 AQVAMSTLPVEDEESSESR Acetyl (Protein N-term) 2105.9423 0.94229329 1977 P78347 GTF2I General transcription factor II-I yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 80.769 80.829 2;3 1.0217E-178 92615 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 268.35 255.15 1863800000 0 0 0 111920000 142230000 131560000 109610000 117960000 93843000 184720000 194810000 193750000 152580000 174830000 256010000 4373 1977 3947 38172;38173;38174;38175;38176;38177;38178;38179;38180;38181;38182;38183;38184;38185;38186;38187;38188;38189;38190;38191;38192;38193;38194;38195 30234;30235;30236;30237;30238;30239;30240;30241;30242;30243;30244;30245;30246;30247;30248;30249;30250 30245 16 AQVARPGGDTIFGK Unmodified 1415.7521 0.75211216 1599 P49773 HINT1 Histidine triad nucleotide-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.57 3.06 5 23 3 1 1 2 2 1 2 2 2 2 2 2 2 2 2 46.734 45.952 2;3 0.00013803 61646 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.04 78.291 4540500000 1722800000 24617000 103760000 47274000 38143000 42559000 55064000 58590000 35598000 66635000 341540000 364250000 64303000 424550000 1150800000 4374 1599 3948 38196;38197;38198;38199;38200;38201;38202;38203;38204;38205;38206;38207;38208;38209;38210;38211;38212;38213;38214;38215;38216;38217;38218;38219;38220;38221;38222;38223 30251;30252;30253;30254;30255;30256;30257;30258;30259;30260;30261;30262 30251 10 AQVCLISSSK Unmodified 1091.5645 0.56449431 5245 Q9Y5Q9 GTF3C3 General transcription factor 3C polypeptide 3 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 38.387 38.467 2 0.0077209 41534 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 61.78 31.613 18783000 0 0 0 0 2960500 0 0 1734300 0 0 0 0 5989300 8098500 0 4375 5245 3949 38224;38225;38226;38227 30263;30264;30265 30264 3 AQVDPLSALK Unmodified 1040.5866 0.58660996 4988 Q9UL63 MKLN1 Muskelin yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 69.972 69.404 2 0.0085374 88174 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.113 47.501 217850000 0 171990000 0 1597500 2207200 3092500 2995100 2313100 2414200 4873800 5836600 4954100 3626200 3566700 8385500 4376 4988 3950 38228;38229;38230;38231;38232;38233;38234;38235;38236;38237;38238;38239;38240;38241 30266;30267;30268;30269;30270 30267 5 AQVEEFLAQHGSEYQSVK Unmodified 2048.9803 0.98033378 2081 Q02809 PLOD1 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 yes yes 0 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 2 2 72.157 68.095 2;3 5.4536E-28 86714 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126 118.1 161840000 0 123210000 38633000 0 0 0 0 0 0 0 0 0 0 0 0 4377 2081 3951 38242;38243;38244;38245 30271;30272;30273;30274;30275 30271 4 AQVEIVTDGEEPAEMIQVLGPK Oxidation (M) 2368.1832 0.18319226 1407 P40121 CAPG Macrophage-capping protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.57 3.46 3 2 2 1 3 1 1 1 83.54 80.464 2;3 4.1607E-167 100155 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 220.52 209.25 321200000 22430000 280270000 4580800 0 0 0 0 0 0 0 8755600 0 0 5172200 0 4378 1407 3952 38246;38247;38248;38249;38250;38251;38252 30276;30277;30278;30279;30280;30281;30282;30283 30277 2197 8 AQVEIVTDGEEPAEMIQVLGPK Unmodified 2352.1883 0.18827764 1407 P40121 CAPG Macrophage-capping protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3 2.37 7 2 1 2 5 2 1 93.5 89.281 2;3 9.3469E-221 107522 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 194.08 189.89 1102200000 87712000 1005400000 6965000 0 0 0 0 0 0 0 0 0 0 0 2143000 4379 1407 3952 38253;38254;38255;38256;38257;38258;38259;38260;38261;38262 30284;30285;30286;30287;30288;30289;30290;30291;30292;30293;30294;30295 30290 11 AQVEIVTDGEEPAEMIQVLGPKPALK Unmodified 2761.4572 0.45718228 1407 P40121 CAPG Macrophage-capping protein yes yes 0 0 1 By MS/MS 2 0 1 1 94.596 86.465 3 4.1502E-31 111926 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.53 98.231 10429000 10429000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4380 1407 3953 38263 30296 30296 1 AQVEQELTTLR Unmodified 1286.683 0.68302954 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.345 58.46 2 6.6236E-05 66158 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 132.01 115.34 204440000 0 0 0 23647000 14323000 12485000 13227000 14771000 10600000 16063000 20998000 24250000 19539000 16443000 18098000 4381 2501 3954 38264;38265;38266;38267;38268;38269;38270;38271;38272;38273;38274;38275 30297;30298;30299;30300;30301;30302;30303;30304;30305;30306;30307;30308;30309;30310;30311;30312 30309 16 AQVIYTR Unmodified 849.47085 0.47085192 1917 P62851 RPS25 40S ribosomal protein S25 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 23.975 24.097 2 0.021069 25491 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 107.32 86.446 301250000 0 0 0 0 42353000 31654000 33218000 32271000 23967000 58365000 13069000 0 66354000 0 0 4382 1917 3955 38276;38277;38278;38279;38280;38281;38282;38283 30313;30314;30315;30316;30317 30317 5 AQVLHVPAPFPGTPGPASPPAFPAK Acetyl (Protein N-term) 2492.3216 0.3216155 2839 Q63ZY3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 yes yes 1 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 92.324 92.444 3 5.2521E-15 107118 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.871 59.159 15595000 0 0 0 0 0 0 0 0 0 0 0 4974700 0 2305500 8314400 4383 2839 3956 38284;38285;38286 30318;30319 30318 2 AQVLPPLRDVR Unmodified 1262.7459 0.74590457 4556 Q9NPQ8 RIC8A Synembryn-A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 57.431 57.609 3 0.0028914 64516 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.815 35.109 477420000 0 0 0 20826000 0 46633000 30765000 30480000 25613000 48179000 48410000 67031000 38545000 29907000 91034000 4384 4556 3957 38287;38288;38289;38290;38291;38292;38293;38294;38295;38296;38297 30320;30321;30322;30323;30324;30325;30326;30327;30328;30329;30330;30331 30323 12 AQVLVEDISDILEEHAEK Unmodified 2037.0266 0.026615266 2819 Q5VV41 ARHGEF16 Rho guanine nucleotide exchange factor 16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 3 1 97.189 92.507 3 2.8339E-20 115432 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 118.48 113.16 152160000 103770000 47796000 593540 0 0 0 0 0 0 0 0 0 0 0 0 4385 2819 3958 38298;38299;38300;38301;38302 30332;30333;30334;30335;30336 30336 5 AQVPGPLTPEMEAR Unmodified 1494.7501 0.75006325 4457 Q9H8Y5 ANKZF1 Ankyrin repeat and zinc finger domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 65.269 65.258 2 0.0091668 74758 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 49.5 43.397 37717000 0 0 0 2298700 2318200 3886700 2947600 3580400 3442700 5752700 8208400 0 0 5281800 0 4386 4457 3959 38303;38304;38305;38306;38307;38308;38309;38310;38311 30337;30338;30339;30340;30341;30342;30343 30342 3 AQVPGSSPGLLSLSLNQQPAAPECK Unmodified 2548.2955 0.29553668 3177 Q86W42 THOC6 THO complex subunit 6 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 83.243 83.341 3 2.181E-10 95669 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 57.147 53.484 55938000 0 0 0 0 3678000 3630200 2530400 3309100 0 0 9228400 10586000 0 9581400 13395000 4387 3177 3960 38312;38313;38314;38315;38316;38317;38318;38319 30344;30345;30346;30347;30348;30349;30350 30348 7 AQVQLQLFK Unmodified 1073.6233 0.62332982 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 74.789 74.898 2 0.003784 86258 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 88.942 62.34 163440000 0 0 0 0 9522700 19406000 10809000 0 12143000 17024000 14512000 19746000 12619000 14330000 33326000 4388 2431 3961 38320;38321;38322;38323;38324;38325;38326;38327;38328;38329 30351;30352;30353;30354;30355;30356;30357;30358;30359;30360;30361;30362;30363;30364 30363 13 AQVSGQSARK Unmodified 1030.552 0.55195579 1440 P41250 GARS Glycine--tRNA ligase yes yes 0 0 1 By MS/MS 2 0 1 1 1.17 -2.1175 2 0.0011378 1351 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 118.5 76.993 124700000 124700000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4389 1440 3962 38330 30365 30365 1 AQVTAAGPQK Unmodified 969.52434 0.52434406 5000 Q9ULM3 YEATS2 YEATS domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 11.221 11.363 2 0.0048357 9791 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 71.379 40.15 52510000 0 0 0 3435200 4854400 6282700 3435300 3218100 2716500 5609300 4330900 6896900 4663400 3629000 3437700 4390 5000 3963 38331;38332;38333;38334;38335;38336;38337;38338;38339;38340;38341;38342 30366;30367;30368;30369;30370;30371;30372;30373;30374;30375;30376 30374 10 AQVTSLLGELQESQSR Unmodified 1744.8955 0.89554151 5288 Q9Y6K9 IKBKG NF-kappa-B essential modulator yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 82.041 82.183 2 6.4582E-15 94866 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 101.32 80.45 26910000 0 0 0 0 0 2212400 0 2501500 0 3499300 4087600 4064800 0 0 10544000 4391 5288 3964 38343;38344;38345;38346;38347;38348 30377;30378;30379;30380;30381 30378 5 AQVTSLLGELQESQSRLEAATK Unmodified 2358.2391 0.23906766 5288 Q9Y6K9 IKBKG NF-kappa-B essential modulator yes yes 0 0 1 By MS/MS 2 0 1 1 94.89 86.76 3 2.9537E-10 112199 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.184 65.202 20312000 20312000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4392 5288 3965 38349 30382 30382 1 AQVYVPLK Unmodified 916.5382 0.53820321 214 O14777 NDC80 Kinetochore protein NDC80 homolog yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 52.049 52.387 2 0.038808 58114 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.898 23.761 43586000 0 0 0 0 0 4506500 0 0 3347300 6567600 7639800 6495300 5008600 4326800 5694300 4393 214 3966 38350;38351;38352;38353;38354;38355;38356;38357 30383;30384 30383 2 AQWNQLQQLDTR Acetyl (Protein N-term) 1541.7587 0.7586541 1419 P40763 STAT3 Signal transducer and activator of transcription 3 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 81.447 81.478 2 7.9989E-09 93993 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 121.36 100.58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4394 1419 3967 38358;38359;38360;38361;38362 30385;30386;30387;30388;30389 30386 5 AQYDAVAAR Unmodified 963.47739 0.47739386 99 Q6KB66;CON__Q6KB66-1 KRT80 Keratin, type II cytoskeletal 80 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 22.419 22.652 2 0.014984 23658 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 111.01 72.769 + 253820000 0 0 0 45269000 9882500 13189000 0 27623000 0 28150000 30866000 44288000 30843000 14397000 9312600 4395 99 3968 38363;38364;38365;38366;38367;38368;38369;38370;38371;38372 30390;30391;30392;30393;30394 30391 1 AQYDELAR Unmodified 964.46141 0.46140945 814 P05783 KRT18 Keratin, type I cytoskeletal 18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.135 30.328 2 7.6989E-13 32899 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 170.73 21.326 1578600000 0 0 0 96763000 118840000 114490000 107840000 92039000 75618000 156290000 126280000 224730000 158650000 131340000 175670000 4396 814 3969 38373;38374;38375;38376;38377;38378;38379;38380;38381;38382;38383;38384 30395;30396;30397;30398;30399;30400;30401;30402;30403;30404;30405;30406 30397 11 AQYDELARK Unmodified 1092.5564 0.55637247 814 P05783 KRT18 Keratin, type I cytoskeletal 18 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.27 22.474 2 4.16E-09 23629 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 164.53 21.413 3051300000 0 0 0 104720000 129420000 205200000 176170000 161330000 166050000 285160000 322810000 544930000 371450000 220600000 363470000 4397 814 3970 38385;38386;38387;38388;38389;38390;38391;38392;38393;38394;38395;38396 30407;30408;30409;30410;30411;30412;30413;30414;30415;30416 30407 8 AQYEDIANR Unmodified 1078.5043 0.5043369 67;53;105 CON__P05787;P05787;CON__Q8BGZ7;CON__O95678;O95678 KRT8;KRT75 Keratin, type II cytoskeletal 8;Keratin, type II cytoskeletal 75 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 28.743 28.275 2 4.4324E-51 30580 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 196.98 182.2 + 7643300000 0 109890000 0 416530000 512620000 544050000 570980000 494850000 483670000 727260000 834810000 874990000 728030000 563490000 782080000 4398 67;105;53 3971 38397;38398;38399;38400;38401;38402;38403;38404;38405;38406;38407;38408;38409;38410 30417;30418;30419;30420;30421;30422;30423;30424;30425;30426;30427;30428;30429;30430 30417 14 AQYEDIANRSRAEAESMYQIK Unmodified 2472.1703 0.17033617 67 CON__P05787;P05787 KRT8 Keratin, type II cytoskeletal 8 yes no 0 0 2 By MS/MS 2 0 1 1 76.149 68.018 3 0.0047654 89719 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.883 34.377 + 12905000 12905000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4399 67 3972 38411 30431 30431 1 AQYEDIAQK Unmodified 1064.5138 0.51383895 780 P04264 KRT1 Keratin, type II cytoskeletal 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.9 1 2 1 22 2 2 3 2 2 1 3 2 2 1 2 1 2 1 29.052 28.836 2 0.0028051 27959 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 136.8 96.529 + 102310000000 239610000 738610000 0 15467000000 6023700000 7119400000 6351400000 15537000000 4706400000 8498300000 7297800000 11933000000 9002200000 5604400000 3794400000 4400 780 3973 38412;38413;38414;38415;38416;38417;38418;38419;38420;38421;38422;38423;38424;38425;38426;38427;38428;38429;38430;38431;38432;38433;38434;38435;38436;38437 30432;30433;30434;30435;30436;30437;30438;30439;30440;30441;30442;30443;30444;30445;30446;30447;30448;30449;30450;30451;30452;30453;30454;30455;30456;30457;30458;30459;30460;30461;30462;30463;30464;30465;30466 30461 33 AQYEDIAQKSK Unmodified 1279.6408 0.64083038 780 P04264 KRT1 Keratin, type II cytoskeletal 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 1 1 2 1 1 1 2 2 1 1 20.711 20.951 2;3 0.0093907 21688 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 33.751 29.745 + 200760000 0 0 0 27531000 9573400 11925000 9661200 27526000 9090200 18910000 15742000 28977000 24468000 10876000 6482200 4401 780 3974 38438;38439;38440;38441;38442;38443;38444;38445;38446;38447;38448;38449;38450;38451;38452 30467;30468;30469;30470;30471;30472;30473 30473 7 AQYEDIAQR Unmodified 1092.52 0.51998696 80;960 CON__P50446;P12035;CON__P12035 KRT3 Keratin, type II cytoskeletal 3 no no 0 0 0 By MS/MS 10 0 1 1 28.906 29.61 2 0.018812 31538 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 86.095 36.653 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4402 80;960 3975 38453 30474 30474 1 AQYEEIANR Unmodified 1092.52 0.51998696 74 CON__P13647;P13647 KRT5 Keratin, type II cytoskeletal 5 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 28.27 28.11 2 1.3615E-28 30555 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 182.13 64.957 + 9726800000 0 16041000 0 1815400000 635380000 619630000 494510000 1226000000 431250000 805530000 877770000 844970000 1185600000 406090000 368660000 4403 74 3976 38454;38455;38456;38457;38458;38459;38460;38461;38462;38463;38464;38465;38466 30475;30476;30477;30478;30479;30480;30481;30482;30483;30484;30485;30486;30487;30488;30489 30487 15 AQYEEIAQR Unmodified 1106.5356 0.53563702 79;66;58;779;77;2056;50 CON__ENSEMBL:ENSBTAP00000038253;CON__P35908v2;P35908;CON__P35908;P04259;Q01546;CON__P19013;P19013;CON__P02538;P02538;CON__P04259 KRT2;KRT6B;KRT76;KRT4;KRT6A Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 2 oral;Keratin, type II cytoskeletal 4;Keratin, type II cytoskeletal 6A no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.12 2.42 1 1 15 2 2 1 2 1 1 1 1 1 1 1 2 1 29.725 29.328 2 1.9293E-13 30712 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 166.17 126.07 + 48573000000 0 314130000 0 7894900000 2431700000 2952100000 2872900000 5129200000 2788000000 3987600000 3292200000 5693200000 6826900000 2221100000 2169200000 4404 50;79;779;2056;77;58;66 3977 38467;38468;38469;38470;38471;38472;38473;38474;38475;38476;38477;38478;38479;38480;38481;38482;38483 30490;30491;30492;30493;30494;30495;30496;30497;30498;30499;30500;30501;30502;30503;30504;30505;30506;30507;30508;30509;30510;30511 30497 22 AQYEEIAQRSK Unmodified 1321.6626 0.66262845 79;77;2056;50 CON__ENSEMBL:ENSBTAP00000038253;CON__P35908v2;P35908;CON__P35908;Q01546;CON__P19013;P19013 KRT2;KRT76;KRT4 Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 2 oral;Keratin, type II cytoskeletal 4 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.56 3.9 6 1 9 2 3 2 1 1 1 1 1 1 1 1 1 25.634 23.825 2;3 3.2389E-07 33530 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 134.98 101.09 + 941850000 79693000 418300000 378800000 8130800 2053300 4144900 0 3084000 21795000 2394900 0 5577500 3602400 14265000 0 4405 50;79;2056;77 3978 38484;38485;38486;38487;38488;38489;38490;38491;38492;38493;38494;38495;38496;38497;38498;38499 30512;30513;30514;30515;30516;30517;30518;30519;30520;30521;30522;30523 30518 10 AQYEEMAK Unmodified 968.42733 0.42733213 69;88 CON__P08729;CON__Q3KNV1;P08729 KRT7 Keratin, type II cytoskeletal 7 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 19.218 19.384 2 0.025413 19795 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 58.716 38.017 + 199900000 0 0 0 12378000 17624000 12796000 15119000 16464000 9910400 22424000 0 31937000 20031000 16713000 24508000 4406 69;88 3979 38500;38501;38502;38503;38504;38505;38506;38507;38508;38509;38510 30524;30525;30526;30527;30528 30525 5 AQYELIAQR Unmodified 1090.5771 0.57710791 96 CON__Q5XKE5;Q5XKE5 KRT79 Keratin, type II cytoskeletal 79 yes no 0 0 0 By MS/MS 10 0 1 1 48.47 47.865 2 0.024653 54618 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 120.46 94.563 + 52642000 0 0 0 52642000 0 0 0 0 0 0 0 0 0 0 0 4407 96 3980 38511 30529 30529 0 AQYEQTLAELHR Unmodified 1457.7263 0.72629134 4974 Q9UKS6 PACSIN3 Protein kinase C and casein kinase substrate in neurons protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 53.759 53.533 3 0.031964 60570 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 32.624 24.909 50783000 0 0 0 11354000 9628800 0 12423000 0 0 0 0 0 0 17378000 0 4408 4974 3981 38512;38513;38514;38515 30530;30531 30530 2 AQYPSQPQR Unmodified 1073.5254 0.52540669 922 P10588 NR2F6 Nuclear receptor subfamily 2 group F member 6 yes yes 0 0 0 By MS/MS 10 0 1 1 17.215 17.004 2 0.028187 17107 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 49.097 35.83 7890600 0 0 0 0 7890600 0 0 0 0 0 0 0 0 0 0 4409 922 3982 38516 30532 30532 1 AQYYLPDGSTIEIGPSR Unmodified 1865.9159 0.9159426 1837 P61163 ACTR1A Alpha-centractin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 83.215 83.311 2 1.8993E-31 96063 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 120.87 105.12 70340000 0 0 0 0 6243900 6862600 4680900 4942000 4386800 12540000 10419000 10083000 4052400 6129000 0 4410 1837 3983 38517;38518;38519;38520;38521;38522;38523;38524;38525;38526 30533;30534;30535;30536;30537;30538;30539;30540;30541;30542 30536 10 ARAEAEDARQK Unmodified 1243.6269 0.62691165 391 O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes yes 0 0 2 By MS/MS 2 0 2 2 5.4374 2.0599 3 0.0010715 4747 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 108.56 86.571 71855000 71855000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4411 391 3984 38527;38528 30543;30544 30544 0 ARAETEELIR Unmodified 1186.6306 0.63060004 1253 P29590 PML Protein PML yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 28.639 29.081 3 0.0078812 31426 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 45.077 27.91 55253000 0 0 0 0 0 0 0 7805300 0 0 0 12462000 14766000 10934000 9285700 4412 1253 3985 38529;38530;38531;38532;38533 30545;30546;30547 30546 3 ARAGEEGPRPTK Unmodified 1267.6633 0.66329715 4486 Q9HAH7 FBRS Probable fibrosin-1 yes yes 0 0 2 By MS/MS 2 0 1 1 7.2415 3.7264 3 0.02056 7035 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.563 44.446 31694000 31694000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4413 4486 3986 38534 30548;30549 30549 2 ARAGEGQAPSTFSK Unmodified 1405.695 0.69499121 609 O94953 KDM4B Lysine-specific demethylase 4B yes yes 0 0 1 By MS/MS 2 0 1 1 23.36 18.384 2 0.036797 26299 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 59.796 25.263 11341000 11341000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4414 609 3987 38535 30550 30550 1 ARAGLEDLQVAFR Unmodified 1444.7787 0.77866126 4781 Q9NZT1 CALML5 Calmodulin-like protein 5 yes yes 0 0 1 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 73.8 73.911 3 0.0036461 85184 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 35.809 27.765 16831000 0 0 0 0 0 3363000 0 2638000 6069600 4760700 0 0 0 0 0 4415 4781 3988 38536;38537;38538;38539 30551 30551 1 ARAYGPGIEPTGNMVK Unmodified 1659.8403 0.84027524 1124 P21333 FLNA Filamin-A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 2 3 1 55.957 49.755 2;3 6.9319E-39 67995 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 168.61 132.08 756510000 693240000 51375000 11900000 0 0 0 0 0 0 0 0 0 0 0 0 4416 1124 3989 38540;38541;38542;38543;38544;38545 30552;30553;30554;30555;30556;30557 30556 5 ARAYGPGIEPTGNMVK Oxidation (M) 1675.8352 0.83518986 1124 P21333 FLNA Filamin-A yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 42.902 37.676 3 0.00080666 51347 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.649 49.289 812650000 760540000 25970000 26135000 0 0 0 0 0 0 0 0 0 0 0 0 4417 1124 3989 38546;38547;38548 30558;30559;30560 30558 1610 3 ARDLALAIR Unmodified 997.60326 0.60326308 1407 P40121 CAPG Macrophage-capping protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.503 46.67 2 0.034373 51685 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 106.42 38.43 84467000 0 0 0 2635600 1857800 9637800 4313300 4302200 2550200 9661000 8032200 10548000 7141200 7937900 15849000 4418 1407 3990 38549;38550;38551;38552;38553;38554;38555;38556;38557;38558;38559;38560 30561 30561 0 ARDLALAIRDSER Unmodified 1484.8059 0.80593865 1407 P40121 CAPG Macrophage-capping protein yes yes 0 0 2 By MS/MS By MS/MS 10 0 2 1 1 43.834 44.231 3 0.019616 48391 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.09 39.737 70898000 0 0 0 0 0 29775000 0 0 0 0 0 0 0 0 41122000 4419 1407 3991 38561;38562 30562 30562 0 ARDLPIPGTISSAGDGNSESR Unmodified 2099.0243 0.024323855 3006 Q6ZRS2 SRCAP Helicase SRCAP yes yes 0 0 1 By matching By MS/MS By matching By MS/MS By matching 10 0 5 1 1 1 1 1 60.719 60.732 3 0.029556 69677 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 15.128 12.782 17943000 0 0 0 2044300 2478300 0 0 0 0 0 0 4780300 0 3152600 5487000 4420 3006 3992 38563;38564;38565;38566;38567 30563;30564 30564 2 ARDPHSGHFVALK Unmodified 1433.7528 0.75278086 956 P11802 CDK4 Cyclin-dependent kinase 4 yes yes 0 0 1 By MS/MS 10 0 1 1 23.511 24.171 3 0.0030411 24560 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.995 26.727 16471000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16471000 4421 956 3993 38568 30565 30565 1 ARDTVTSELAAVK Unmodified 1359.7358 0.73579339 2198 Q12851 MAP4K2 Mitogen-activated protein kinase kinase kinase kinase 2 yes yes 0 0 1 By MS/MS 2 0 1 1 52.563 48.642 3 0.023174 61041 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 41.227 31.038 7386800 0 0 7386800 0 0 0 0 0 0 0 0 0 0 0 0 4422 2198 3994 38569 30566 30566 1 ARDVYEEAIR Unmodified 1220.6149 0.61494998 4521 Q9HCS7 XAB2 Pre-mRNA-splicing factor SYF1 yes yes 0 0 1 By MS/MS 10 0 1 1 34.036 34.088 3 0.040568 37382 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 27.378 1.3659 16733000 0 0 0 0 0 0 16733000 0 0 0 0 0 0 0 0 4423 4521 3995 38570 30567 30567 1 ARDYDAMGSQTK Oxidation (M) 1357.5932 0.59322826 5077 Q9Y230 RUVBL2 RuvB-like 2 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.5244 6.6486 3 9.2047E-05 4816 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 83.137 73.085 298520000 0 0 0 14882000 17178000 20967000 23863000 19004000 19410000 32721000 30578000 36439000 28572000 23518000 31393000 4424 5077 3996 38571;38572;38573;38574;38575;38576;38577;38578;38579;38580;38581;38582 30568;30569;30570;30571;30572;30573;30574;30575;30576;30577;30578;30579 30573 6463 12 ARDYDAMGSQTK Unmodified 1341.5983 0.59831364 5077 Q9Y230 RUVBL2 RuvB-like 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.511 14.674 3 0.0037415 14240 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 69.352 53.98 546300000 0 0 0 27456000 32441000 37635000 26130000 33095000 25203000 65300000 53017000 59237000 50400000 54533000 81849000 4425 5077 3996 38583;38584;38585;38586;38587;38588;38589;38590;38591;38592;38593;38594 30580;30581;30582;30583;30584;30585;30586;30587 30580 2 ARDYDHLFK Acetyl (Protein N-term) 1205.5829 0.58292157 2512 Q15286 RAB35 Ras-related protein Rab-35 yes yes 1 0 1 By MS/MS By MS/MS 6 4 1 1 1 1 59.244 55.428 3 0.028174 76132 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.473 37.496 36453000 14048000 0 0 0 0 0 0 0 0 0 0 0 0 0 22405000 4426 2512 3997 38595;38596 30588;30589 30589 0 ARDYNPYPYSDAINTYDK Unmodified 2164.9702 0.97016302 3094 Q7Z460 CLASP1 CLIP-associating protein 1 yes yes 0 0 1 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 64.505 64.648 3 0.0029865 73384 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.997 27.713 50527000 0 0 0 0 1563300 3139700 2821300 3689000 2913100 6127800 0 9111600 5006800 6362600 9791800 4427 3094 3998 38597;38598;38599;38600;38601;38602;38603;38604;38605;38606 30590;30591;30592 30591 3 AREAYNQGLK Unmodified 1148.5938 0.5938206 601 O94906 PRPF6 Pre-mRNA-processing factor 6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching 7.54 3.69 4 9 2 2 1 1 1 1 1 1 1 1 1 14.652 13.696 2;3 0.0027474 19617 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.862 64.203 261480000 130440000 0 28378000 5501700 8866400 1172300 0 9329600 10995000 13073000 0 0 19897000 14118000 19708000 4428 601 3999 38607;38608;38609;38610;38611;38612;38613;38614;38615;38616;38617;38618;38619 30593;30594;30595;30596 30595 3 AREDIFMETLK Unmodified 1351.6806 0.6805867 1185 P25311 AZGP1 Zinc-alpha-2-glycoprotein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 2 1 2 1 2 1 2 2 2 1 2 2 67.611 67.712 2;3 0.0010396 78921 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 62.924 40.45 286670000 0 0 0 45435000 6111900 22870000 6764900 25072000 10520000 26633000 31498000 51748000 17453000 15278000 27282000 4429 1185 4000 38620;38621;38622;38623;38624;38625;38626;38627;38628;38629;38630;38631;38632;38633;38634;38635;38636;38637;38638;38639 30597;30598;30599;30600;30601;30602;30603;30604;30605;30606;30607;30608;30609;30610;30611;30612;30613 30611 14 AREDIFMETLK Oxidation (M) 1367.6755 0.67550132 1185 P25311 AZGP1 Zinc-alpha-2-glycoprotein yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 2 1 1 56.85 56.628 3 0.0010905 64566 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 64.55 44.892 247330000 0 0 0 198600000 0 0 0 0 0 0 0 0 48722000 0 0 4430 1185 4000 38640;38641;38642;38643;38644 30614;30615;30616;30617;30618;30619 30616 1716 6 AREELSRLQQETAELEESVESGK Unmodified 2617.2831 0.28311732 1457 P42566 EPS15 Epidermal growth factor receptor substrate 15 yes yes 0 0 2 By MS/MS 2 0 1 1 87.507 79.377 4 6.6333E-05 103355 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.726 59.656 12972000 12972000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4431 1457 4001 38645 30620 30620 1 AREHFGTVK Unmodified 1043.5512 0.55122751 2553 Q15631 TSN Translin yes yes 0 0 1 By MS/MS 2 0 1 1 14.987 10.939 2 0.04495 16140 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.111 52.842 47206000 47206000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4432 2553 4002 38646 30621 30621 1 AREIDESLIFYK Unmodified 1482.7718 0.77184455 2285 Q13421 MSLN Mesothelin;Megakaryocyte-potentiating factor;Mesothelin, cleaved form yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 73.117 73.33 3 0.0026098 83813 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.185 50.134 23687000 0 0 0 0 0 0 0 0 6156700 5863100 0 0 0 0 11667000 4433 2285 4003 38647;38648;38649 30622;30623;30624 30623 3 AREILVEESNVQR Unmodified 1541.8162 0.81616898 1811 P60510 PPP4C Serine/threonine-protein phosphatase 4 catalytic subunit yes yes 0 0 1 By matching By MS/MS By MS/MS 10 0 3 1 1 1 39.57 39.756 3 0.018808 43562 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 24.225 16.442 16934000 0 0 0 0 2176500 0 0 0 0 0 0 8398200 0 6359000 0 4434 1811 4004 38650;38651;38652 30625 30625 1 ARENPSEEAQNLVEFTDEEGYGR Unmodified 2639.1736 0.17356687 2202 Q12874 SF3A3 Splicing factor 3A subunit 3 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 77.099 77.189 3 1.6758E-43 88655 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 109.41 106.8 113880000 0 0 0 0 1696300 6091400 0 6648100 4768900 17536000 10297000 0 0 0 66844000 4435 2202 4005 38653;38654;38655;38656;38657;38658;38659 30626;30627;30628;30629;30630;30631;30632 30628 7 ARENPSEEAQNLVEFTDEEGYGRYLDLHDCYLK Unmodified 3959.7908 0.79082503 2202 Q12874 SF3A3 Splicing factor 3A subunit 3 yes yes 0 0 2 By MS/MS 2 0 2 2 93.505 85.375 4;5 2.0017E-91 110535 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 123.75 122.28 89984000 89984000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4436 2202 4006 38660;38661 30633;30634;30635 30635 3 AREQEELLAPADGTVELVR Unmodified 2095.0909 0.090946857 1097 P19971 TYMP Thymidine phosphorylase yes yes 0 0 1 By MS/MS By matching By matching By matching By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 76.226 76.287 3 0.010338 88393 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 29.818 21.428 50842000 0 0 0 7407000 0 4816900 0 0 0 4892100 6129300 5778000 0 3332900 18486000 4437 1097 4007 38662;38663;38664;38665;38666;38667;38668 30636 30636 1 ARESYVETELIFALAK Unmodified 1838.9778 0.97781458 2040 Q00610 CLTC Clathrin heavy chain 1 yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 2 2 2 2 95.58 90.668 3 4.5659E-05 93753 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 93.51 7.7759 94726000 79257000 15469000 0 0 0 0 0 0 0 0 0 0 0 0 0 4438 2040 4008 38669;38670;38671;38672 30637;30638;30639;30640;30641 30639 5 ARFEELNADLFR Unmodified 1479.747 0.74702678 934;1743 P11142;P54652 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 76.485 76.637 3 5.524E-34 88443 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 156.36 138.29 614570000 0 0 0 0 0 44858000 0 21198000 30017000 23454000 23707000 37724000 17879000 33600000 382130000 4439 934;1743 4009 38673;38674;38675;38676;38677;38678;38679;38680;38681 30642;30643;30644;30645;30646;30647;30648;30649;30650;30651;30652;30653;30654;30655;30656;30657 30643 16 ARFEEVLSK Unmodified 1077.5819 0.58185893 4003 Q96TA1 FAM129B Niban-like protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 49.284 41.459 2 0.0043161 57310 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 120.99 47.729 210180000 210180000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4440 4003 4010 38682 30658;30659;30660 30660 3 ARFLENVAAAETEK Unmodified 1547.7944 0.79437091 5260 Q9Y613 FHOD1 FH1/FH2 domain-containing protein 1 yes yes 0 0 1 By MS/MS 2 0 2 2 66.302 58.008 2;3 0.0013599 77772 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.633 57.17 36101000 36101000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4441 5260 4011 38683;38684 30661;30662 30661 0 ARGCAYPAPYLDEYGETDPGLK Unmodified 2442.1162 0.11617533 3246 Q8IWV7 UBR1 E3 ubiquitin-protein ligase UBR1 yes yes 0 0 1 By MS/MS 2 0 1 1 76.62 73.857 3 0.0011188 89924 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 42.123 35.353 8203000 0 0 8203000 0 0 0 0 0 0 0 0 0 0 0 0 4442 3246 4012 38685 30663 30663 1 ARGGNIGDGGGAADR Unmodified 1342.6338 0.63378794 1755 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 7.7814 7.8935 3 3.6883E-20 5239 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.657 82.468 131420000 0 0 0 7355900 4844300 9277500 0 7662000 0 11479000 0 21218000 13504000 26085000 29999000 4443 1755 4013 38686;38687;38688;38689;38690;38691;38692;38693;38694 30664;30665;30666;30667;30668;30669;30670;30671 30666 5 ARGLPDNISSVLNK Unmodified 1482.8154 0.8154407 2638 Q16851 UGP2 UTP--glucose-1-phosphate uridylyltransferase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.105 69.183 3 0.010893 78854 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 37.013 22.755 103550000 0 0 0 2873300 2288700 11102000 5102700 6348700 4760800 7702200 9114200 11614000 7176300 7539600 27925000 4444 2638 4014 38695;38696;38697;38698;38699;38700;38701;38702;38703;38704;38705;38706 30672;30673;30674;30675 30675 1 ARGNWEQPQNQNQTQHK Unmodified 2062.9681 0.96814638 2380 Q14157 UBAP2L Ubiquitin-associated protein 2-like yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 2 1 2 2 2 2 2 2 2 2 2 13.204 13.381 3;4 4.1422E-05 12629 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 65.943 64.583 166260000 0 0 0 2701100 4524400 3674900 12165000 9300300 10187000 13693000 17706000 19164000 24659000 14697000 33787000 4445 2380 4015 38707;38708;38709;38710;38711;38712;38713;38714;38715;38716;38717;38718;38719;38720;38721;38722;38723;38724;38725;38726;38727;38728 30676;30677;30678;30679;30680;30681;30682;30683;30684 30677 9 ARGQGSSPVAMQK Unmodified 1315.6667 0.66666797 1073 P18206 VCL Vinculin yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.003 14.165 3 0.00047464 13613 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 53.034 36.896 35117000 0 0 0 3096900 1707400 2991000 1360200 1684600 759990 3447700 3777400 2720700 1861200 3543800 8166100 4446 1073 4016 38729;38730;38731;38732;38733;38734;38735;38736;38737;38738;38739;38740 30685;30686;30687;30688;30689 30685 5 ARGSEDDDAQAQHPR Unmodified 1651.7299 0.72987317 2972 Q6UB99 ANKRD11 Ankyrin repeat domain-containing protein 11 yes yes 0 0 1 By matching By matching By matching By matching By MS/MS By matching By matching By matching 10 0 8 1 1 1 1 1 1 1 1 5.7482 5.9046 3 0.0015758 3944 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 37.555 30.147 15928000 0 0 0 0 0 950100 1682700 0 1454600 3280100 1614000 2075100 1950400 0 2921200 4447 2972 4017 38741;38742;38743;38744;38745;38746;38747;38748 30690 30690 1 ARGTFDNAETK Unmodified 1208.5786 0.57856447 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.87 6 10 2 2 2 1 1 1 1 1 1 1 1 1 1 11.41 10.295 2;3 0.00093704 12976 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 96.604 82.795 743950000 502800000 20797000 106770000 0 5967500 16029000 8393100 8628300 9230100 13366000 0 8098100 16479000 17119000 10267000 4448 2392 4018 38749;38750;38751;38752;38753;38754;38755;38756;38757;38758;38759;38760;38761;38762;38763;38764 30691;30692;30693;30694;30695;30696;30697;30698;30699;30700;30701 30698 6 ARHEVLLISAEQDK Unmodified 1607.8631 0.86311917 2033 Q00341 HDLBP Vigilin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 2 1 2 45.583 44.939 3;4 0.0010122 49901 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 46.319 42.846 198730000 17104000 0 0 0 0 0 0 0 12565000 0 17172000 0 32957000 13557000 105380000 4449 2033 4019 38765;38766;38767;38768;38769;38770;38771;38772;38773;38774 30702;30703;30704;30705;30706;30707;30708;30709;30710;30711;30712;30713;30714 30706 13 ARHFSEHPSTSK Unmodified 1382.6691 0.66911081 360 O43719 HTATSF1 HIV Tat-specific factor 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 6.7604 6.8962 3 0.0052034 5036 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 44.608 20.858 44489000 0 0 0 0 0 0 6229800 0 0 7824800 0 11797000 18638000 0 0 4450 360 4020 38775;38776;38777;38778;38779 30715;30716;30717 30716 3 ARHPQLLYESK Unmodified 1340.7201 0.72008375 1551 P48729 CSNK1A1 Casein kinase I isoform alpha yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 30.943 29.412 3 0.001371 28780 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.554 62.184 66593000 10268000 0 0 17659000 0 0 8474400 0 0 0 0 0 0 0 30191000 4451 1551 4021 38780;38781;38782;38783 30718;30719;30720;30721 30719 4 ARIPFYGSYTEMDPVIIASEGVEK Oxidation (M) 2687.3153 0.31526907 1826 P61011 SRP54 Signal recognition particle 54 kDa protein yes yes 0 1 1 By MS/MS 10 0 1 1 84.385 84.488 3 7.0221E-15 97905 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 72.227 65.115 6318300 0 0 0 0 0 0 0 0 0 6318300 0 0 0 0 0 4452 1826 4022 38784 30722 30722 2959 1 ARIQAGAEAK Unmodified 1013.5618 0.56179219 5031 Q9UNF1 MAGED2 Melanoma-associated antigen D2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 9.6004 6.4792 2 3.948E-05 10904 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 128.6 91.901 415270000 373650000 18792000 22834000 0 0 0 0 0 0 0 0 0 0 0 0 4453 5031 4023 38785;38786;38787 30723;30724 30723 2 ARIVLANDPDADRLAVAEK Unmodified 2036.1015 0.10145196 3844 Q96G03 PGM2 Phosphoglucomutase-2 yes yes 0 0 2 By MS/MS 2 0 2 2 70.823 62.557 3;4 0.00059709 83238 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.12 35.692 45945000 45945000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4454 3844 4024 38788;38789 30725;30726 30726 2 ARLAEQAERYDDMAAAMK Unmodified 2038.9564 0.95644399 1869 P61981 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes yes 0 0 2 By MS/MS By MS/MS By MS/MS 1.83 0.373 1 5 3 2 1 75.117 70.639 3;4 2.0992E-47 81136 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 105.9 95.701 524190000 456430000 65697000 2069100 0 0 0 0 0 0 0 0 0 0 0 0 4455 1869 4025 38790;38791;38792;38793;38794;38795 30727;30728;30729;30730;30731;30732;30733;30734 30733 8 ARLAEQAERYDDMAAAMK 2 Oxidation (M) 2070.9463 0.94627323 1869 P61981 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes yes 0 2 2 By MS/MS By MS/MS 2 0 4 2 2 40.919 35.777 3;4 0.0013124 49183 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 41.348 6.1714 397060000 385270000 0 11789000 0 0 0 0 0 0 0 0 0 0 0 0 4456 1869 4025 38796;38797;38798;38799 30735;30736 30736 3024;3025 2 ARLAEQAERYDDMAAAMK Oxidation (M) 2054.9514 0.95135861 1869 P61981 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes yes 0 1 2 By MS/MS 2 0 4 4 54.43 46.344 3;4 1.0612E-06 64506 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.143 29.25 651940000 651940000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4457 1869 4025 38800;38801;38802;38803 30737;30738;30739;30740 30739 3024;3025 3 ARLEETDRR Unmodified 1144.5949 0.59488324 1528 P47897 QARS Glutamine--tRNA ligase yes yes 0 0 2 By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 6.4027 6.5769 3 0.030168 4277 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 93.556 71.026 209280000 0 0 0 0 0 16394000 17309000 11985000 0 23498000 32697000 29721000 18079000 14947000 44651000 4458 1528 4026 38804;38805;38806;38807;38808;38809;38810;38811;38812 30741 30741 1 ARLEIEPEWAYGK Unmodified 1560.7936 0.79364262 2043 Q00688 FKBP3 Peptidyl-prolyl cis-trans isomerase FKBP3 yes yes 0 0 1 By MS/MS By matching By matching By MS/MS 8 3.46 1 3 1 1 1 1 74.321 72.474 3 0.00074936 94260 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.44 81.396 176310000 155570000 0 0 0 0 0 0 0 0 0 4609400 0 1662000 0 14468000 4459 2043 4027 38813;38814;38815;38816 30742;30743 30743 1 ARLENQEGIDFIK Unmodified 1531.7995 0.79945628 3256 Q8IX90 SKA3 Spindle and kinetochore-associated protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 61.036 61.315 3 0.001395 69074 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.03 27.693 57340000 0 0 0 0 0 7404400 0 0 4896600 7237400 7034400 8217200 0 9804300 12745000 4460 3256 4028 38817;38818;38819;38820;38821;38822;38823 30744;30745;30746;30747;30748;30749;30750 30746 7 ARLGEASDSELADADK Unmodified 1646.7748 0.77475768 2759 Q5SW79 CEP170 Centrosomal protein of 170 kDa yes yes 0 0 1 By MS/MS 10 0 1 1 35.089 35.829 3 0.001359 38944 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 44.299 28.866 3884700 0 0 0 0 0 0 0 0 0 0 0 3884700 0 0 0 4461 2759 4029 38824 30751 30751 1 ARLLAEQQNK Unmodified 1169.6517 0.65166983 4761 Q9NZ63 C9orf78 Uncharacterized protein C9orf78 yes yes 0 0 1 By MS/MS 2 0 2 2 21.985 17.165 2;3 0.024332 24714 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 146.88 91.514 96689000 96689000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4462 4761 4030 38825;38826 30752;30753 30753 0 ARLLPEGEETLESDDEK Unmodified 1929.9167 0.91673047 3360 Q8N6N3 C1orf52 UPF0690 protein C1orf52 yes yes 0 0 1 By MS/MS 2 0 1 1 63.615 55.336 3 0.0045611 74526 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.704 40.162 15809000 15809000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4463 3360 4031 38827 30754 30754 1 ARLLPEGEETLESDDEKDEHTSK Unmodified 2627.2198 0.21984836 3360 Q8N6N3 C1orf52 UPF0690 protein C1orf52 yes yes 0 0 2 By MS/MS 2 0 1 1 55.822 47.675 4 0.00096375 65206 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 44.632 37.68 6845800 6845800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4464 3360 4032 38828 30755 30755 1 ARLSGYEEALK Unmodified 1235.651 0.65100113 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.15 3.37 3 10 2 1 1 1 1 1 1 1 1 1 1 1 43.173 41.851 2;3 0.0019508 59300 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.451 44.597 129470000 72010000 0 3252000 0 3151100 5394400 5766200 0 5186100 7450100 5642700 7045200 4913100 3113200 6545000 4465 2361 4033 38829;38830;38831;38832;38833;38834;38835;38836;38837;38838;38839;38840;38841 30756;30757;30758;30759;30760;30761;30762 30760 5 ARLTEGCSFR Unmodified 1195.5768 0.57679033 3032;1460 P42677;Q71UM5 RPS27;RPS27L 40S ribosomal protein S27;40S ribosomal protein S27-like no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.946 27.144 3 0.0072292 29093 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 45.653 33.49 133920000 0 0 0 8121000 6451700 6545500 9401700 9529100 12720000 8392500 13662000 12901000 15106000 12942000 18152000 4466 1460;3032 4034 38842;38843;38844;38845;38846;38847;38848;38849;38850;38851;38852;38853 30763;30764;30765;30766;30767;30768;30769;30770;30771 30765 7 ARLTQELQQAK Unmodified 1284.715 0.71499837 1575 P49454 CENPF Centromere protein F yes yes 0 0 1 By MS/MS 2 0 1 1 40.986 34.305 2 0.031251 47458 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.549 16.528 3305600 3305600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4467 1575 4035 38854 30772 30772 1 ARMQEAMTQEVSDVFSDTTTPIK 2 Oxidation (M) 2616.2047 0.20473234 1073 P18206 VCL Vinculin yes yes 0 2 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 76.503 71.231 3 1.4672E-44 91452 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 120.64 116.48 99426000 23863000 24974000 50590000 0 0 0 0 0 0 0 0 0 0 0 0 4468 1073 4036 38855;38856;38857 30773;30774;30775;30776 30774 1528;1529 4 ARMQEAMTQEVSDVFSDTTTPIK Oxidation (M) 2600.2098 0.20981772 1073 P18206 VCL Vinculin yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2 0 6 2 2 2 81.675 76.527 3 1.5879E-38 94199 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 119.34 115.81 172810000 44268000 81101000 47444000 0 0 0 0 0 0 0 0 0 0 0 0 4469 1073 4036 38858;38859;38860;38861;38862;38863 30777;30778;30779;30780;30781;30782;30783;30784 30779 1528;1529 8 ARMQEAMTQEVSDVFSDTTTPIK Unmodified 2584.2149 0.2149031 1073 P18206 VCL Vinculin yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 88.161 84.508 3 5.6601E-15 105299 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.976 81.615 93380000 0 84750000 8630400 0 0 0 0 0 0 0 0 0 0 0 0 4470 1073 4036 38864;38865 30785;30786;30787;30788 30785 4 ARNLQDGQISDTGDLGEDIASN Unmodified 2288.0517 0.051660818 3101 Q7Z4S6 KIF21A Kinesin-like protein KIF21A yes yes 0 0 1 By MS/MS 2.5 0.5 2 2 4 67.872 62.579 2;3 9.0788E-19 79833 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.89 119.31 40921000 0 40921000 0 0 0 0 0 0 0 0 0 0 0 0 0 4471 3101 4037 38866;38867;38868;38869 30789;30790 30790 2 ARNPNELSVSANQK Unmodified 1526.7801 0.78011783 2993 Q6XZF7 DNMBP Dynamin-binding protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23.105 22.672 3 5.3845E-06 23664 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 79.875 72.993 174020000 65101000 0 12705000 3719600 4615400 6084400 6382000 6066800 4546000 8639500 12978000 13129000 7663800 8503000 13889000 4472 2993 4038 38870;38871;38872;38873;38874;38875;38876;38877;38878;38879;38880;38881;38882;38883 30791;30792;30793;30794;30795;30796;30797;30798;30799;30800;30801;30802;30803;30804 30791 14 ARNQHLVSQQK Unmodified 1307.7058 0.70583067 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 5.9471 6.0645 3 0.00013988 3719 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 107.06 77.312 130940000 0 0 0 7056900 7296400 9052200 13486000 8889000 11826000 10538000 7379400 14825000 9101100 8870500 22614000 4473 965 4039 38884;38885;38886;38887;38888;38889;38890;38891;38892;38893;38894;38895;38896 30805;30806;30807;30808;30809;30810;30811;30812;30813;30814;30815;30816;30817 30806 13 ARNQITQLESLK Unmodified 1399.7783 0.77832691 2698 Q53EZ4 CEP55 Centrosomal protein of 55 kDa yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 55.153 52.245 3 0.0036046 72766 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.301 47.346 42599000 28942000 0 0 0 6393700 0 7262700 0 0 0 0 0 0 0 0 4474 2698 4040 38897;38898;38899 30818;30819;30820 30819 3 ARPAEVGGMQLR Unmodified 1283.6768 0.67683873 1330 P33316 DUT Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial yes yes 0 0 1 By matching By MS/MS By MS/MS 10 0 3 1 1 1 37.46 37.975 3 0.048715 40817 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 20.271 4.6418 27346000 0 0 0 0 0 0 2451700 0 0 0 0 8429800 0 0 16464000 4475 1330 4041 38900;38901;38902 30821 30821 1 ARPATDSFDDYPPR Unmodified 1606.7376 0.73758431 1166 P23588 EIF4B Eukaryotic translation initiation factor 4B yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 2 1 1 1 2 1 43.618 43.81 3 0.0014284 48700 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.695 43.784 105420000 0 0 0 4981300 6157500 0 0 14892000 0 8136300 7562800 24570000 0 22659000 16465000 4476 1166 4042 38903;38904;38905;38906;38907;38908;38909;38910;38911;38912 30822;30823;30824;30825 30822 1 ARPEDVVNLDLK Unmodified 1367.7409 0.74087877 4500 Q9HBI1 PARVB Beta-parvin yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 68.341 63.583 3 0.020102 77824 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 51.875 36.673 51933000 0 42328000 9605300 0 0 0 0 0 0 0 0 0 0 0 0 4477 4500 4043 38913;38914;38915 30826;30827 30827 0 ARPFPDGLAEDIDK Unmodified 1542.7678 0.7678218 980 P13639 EEF2 Elongation factor 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.07 3.95 1 18 4 23 8 8 7 2 1 2 2 2 2 2 2 2 2 2 2 70.988 69.325 2;3 6.2022E-43 85373 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 167.14 132.26 6032900000 1567900000 2179700000 1505700000 17726000 10106000 53715000 17926000 22052000 30419000 37515000 98796000 70535000 35233000 84383000 301150000 4478 980 4044 38916;38917;38918;38919;38920;38921;38922;38923;38924;38925;38926;38927;38928;38929;38930;38931;38932;38933;38934;38935;38936;38937;38938;38939;38940;38941;38942;38943;38944;38945;38946;38947;38948;38949;38950;38951;38952;38953;38954;38955;38956;38957;38958;38959;38960;38961 30828;30829;30830;30831;30832;30833;30834;30835;30836;30837;30838;30839;30840;30841;30842;30843;30844;30845;30846;30847;30848;30849;30850;30851;30852;30853;30854;30855;30856;30857;30858;30859;30860;30861;30862;30863;30864;30865;30866;30867;30868;30869;30870;30871;30872;30873;30874;30875;30876;30877;30878;30879;30880;30881;30882;30883;30884;30885;30886 30871 51 ARPFPDGLAEDIDKGEVSAR Unmodified 2142.0705 0.070545766 980 P13639 EEF2 Elongation factor 2 yes yes 0 0 2 By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 2 2 2 71.94 72.215 3;4 1.7419E-14 82692 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.308 80.521 149480000 0 0 0 0 0 3290100 0 0 0 0 19935000 15287000 0 0 110970000 4479 980 4045 38962;38963;38964;38965;38966;38967;38968 30887;30888;30889;30890 30888 4 ARPLVPSSQK Acetyl (Protein N-term) 1123.635 0.63495714 1574 P49427 CDC34 Ubiquitin-conjugating enzyme E2 R1 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.472 34.655 2 6.472E-05 38833 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 130.75 85.666 123630000 0 0 0 7394100 4515600 9795400 6761600 7852500 4192300 14466000 17341000 11622000 11750000 10767000 17174000 4480 1574 4046 38969;38970;38971;38972;38973;38974;38975;38976;38977;38978;38979;38980 30891;30892;30893;30894;30895;30896;30897;30898;30899 30898 8 ARPNTVISQEPFVPK Unmodified 1681.9152 0.91515474 5009 Q9ULW0 TPX2 Targeting protein for Xklp2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 61.793 61.884 3 0.0049127 69752 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 23.919 18.084 168020000 0 0 0 11514000 13180000 0 0 0 0 21312000 25243000 31683000 14063000 19766000 31260000 4481 5009 4047 38981;38982;38983;38984;38985;38986;38987;38988 30900;30901;30902;30903 30901 4 ARPPAVPLLLPPASAETVGPAPSGALR Unmodified 2604.4752 0.47515602 504 O75474 FRAT2 GSK-3-binding protein FRAT2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 86.869 87.025 3 0.0052461 100470 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 23.223 20.341 22510000 0 0 0 0 0 0 0 4555600 3142600 3224800 3225100 0 2132400 0 6229900 4482 504 4048 38989;38990;38991;38992;38993;38994 30904;30905;30906;30907 30906 3 ARPPEEGEDSRPPR Unmodified 1591.7703 0.77028142 202 O14686 KMT2D Histone-lysine N-methyltransferase 2D yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 12.363 12.482 4 0.024594 11992 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 28.727 24.336 56186000 0 0 0 2847800 3749300 4228700 3642100 4378800 3584200 7374800 0 7003300 5924600 5478200 7974500 4483 202 4049 38995;38996;38997;38998;38999;39000;39001;39002;39003;39004;39005 30908;30909;30910;30911 30911 3 ARPPGPPDLGAFR Unmodified 1349.7204 0.7204181 1628 P50548 ERF ETS domain-containing transcription factor ERF yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.251 62.348 3 0.00012632 71008 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 83.617 83.617 303430000 0 0 0 12250000 13349000 24393000 16812000 24597000 14240000 31353000 27995000 40471000 28561000 26251000 43157000 4484 1628 4050 39006;39007;39008;39009;39010;39011;39012;39013;39014;39015;39016;39017 30912;30913;30914;30915;30916;30917;30918;30919;30920;30921;30922 30918 8 ARPPGPPDLGAFRGPPLAR Unmodified 1941.0697 0.069698326 1628 P50548 ERF ETS domain-containing transcription factor ERF yes yes 0 0 2 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 1 1 2 74.033 74.115 4 1.4728E-05 84811 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.298 55.996 206710000 0 0 0 5079300 4372900 34548000 6491200 17178000 20499000 12219000 11484000 26735000 12454000 10049000 45601000 4485 1628 4051 39018;39019;39020;39021;39022;39023;39024;39025;39026;39027;39028;39029;39030 30923;30924;30925;30926;30927;30928;30929;30930;30931;30932;30933 30927 11 ARQAAPCVLFFDELDSIAK Unmodified 2150.083 0.083024708 1755 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 0 1 By MS/MS By MS/MS 2.67 0.471 1 2 2 1 98.203 93.219 3 0.00055198 117195 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 38.377 23.607 17751000 15117000 2633900 0 0 0 0 0 0 0 0 0 0 0 0 0 4486 1755 4052 39031;39032;39033 30934;30935 30935 2 ARQEELYSELQAR Unmodified 1591.7954 0.79543354 2501 Q15149 PLEC Plectin yes yes 0 0 1 By MS/MS 10 0 1 1 50.28 50.445 3 0.0069742 57074 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 53.136 45.846 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4487 2501 4053 39034 30936 30936 1 ARQENGMPEEPATTAR Unmodified 1756.8162 0.81624534 714 O96013 PAK4 Serine/threonine-protein kinase PAK 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.116 26.316 3 0.030336 28005 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 23.073 15.941 46223000 0 0 0 3648300 2872200 2957000 2479600 3447300 2172400 5693600 4118400 7142100 3135500 3544800 5011700 4488 714 4054 39035;39036;39037;39038;39039;39040;39041;39042;39043;39044;39045;39046 30937;30938;30939 30938 3 ARQIALQDQLLK Unmodified 1395.8198 0.8197978 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.551 59.661 3 0.0016885 67140 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.924 43.319 90782000 0 0 0 5073200 3920200 5627900 8686700 7834800 7016600 7290700 8687200 8818700 8552100 8177200 11097000 4489 2556 4055 39047;39048;39049;39050;39051;39052;39053;39054;39055;39056;39057;39058 30940;30941;30942;30943;30944;30945;30946;30947;30948;30949;30950;30951;30952 30942 13 ARQLEEELR Unmodified 1142.6044 0.60438529 90 CON__Q3SX28 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 27.087 27.588 3 0.0034561 28511 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 72.643 27.482 + 86364000 0 0 0 0 0 0 0 0 0 0 0 0 0 32874000 53490000 4490 90 4056 39059;39060 30953;30954 30954 1 ARQLLDQVEQIQK Unmodified 1567.8682 0.86820455 3125 Q7Z7H5 TMED4 Transmembrane emp24 domain-containing protein 4 yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 59.477 59.305 3 0.013699 67614 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 26.359 18.182 6555200 0 0 0 0 2065100 0 0 4490100 0 0 0 0 0 0 0 4491 3125 4057 39061;39062 30955 30955 1 ARQPPPGVMPK Unmodified 1176.6437 0.64374769 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 25.669 25.889 3 0.0010177 27623 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 55.806 44.213 195250000 0 0 0 5807600 27770000 23918000 0 12895000 14087000 14243000 21342000 23052000 13544000 15375000 23213000 4492 19 4058 39063;39064;39065;39066;39067;39068;39069;39070;39071;39072;39073 30956;30957;30958;30959;30960;30961 30961 3 ARQQDEEMLELPAPAEVAAK Oxidation (M) 2211.0841 0.08414692 1418 P40692 MLH1 DNA mismatch repair protein Mlh1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 69.532 69.639 3 4.6671E-08 80330 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 70.414 65.286 64389000 0 0 0 0 4991100 0 7474600 0 0 10107000 11006000 13047000 10489000 7274700 0 4493 1418 4059 39074;39075;39076;39077;39078;39079;39080 30962;30963;30964;30965;30966;30967;30968;30969 30969 2227 8 ARQQDEEMLELPAPAEVAAK Unmodified 2195.0892 0.089232298 1418 P40692 MLH1 DNA mismatch repair protein Mlh1 yes yes 0 0 1 By matching By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 76.031 76.213 3 0.00026151 87447 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.814 37.31 34004000 0 0 0 0 0 0 0 3672900 0 4043500 4038500 0 0 4878200 17371000 4494 1418 4059 39081;39082;39083;39084;39085 30970 30970 1 ARQQLEALLNK Unmodified 1282.7357 0.73573382 4105 Q9BRA0 NAA38 N-alpha-acetyltransferase 38, NatC auxiliary subunit yes yes 0 0 1 By MS/MS 10 0 1 1 50.534 51.239 3 0.0012264 57559 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.98 47.025 19379000 0 0 0 0 0 0 0 0 0 0 0 19379000 0 0 0 4495 4105 4060 39086 30971 30971 1 ARQQLQEELR Unmodified 1269.6789 0.67894722 5278 Q9Y6D9 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 25.675 25.876 3 0.00094541 27775 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 91.636 75.005 233120000 0 0 0 9824600 12863000 15600000 17885000 13348000 15463000 30874000 20943000 19392000 23962000 20374000 32591000 4496 5278 4061 39087;39088;39089;39090;39091;39092;39093;39094;39095;39096;39097;39098 30972;30973;30974;30975;30976;30977;30978;30979;30980;30981;30982;30983 30974 12 ARQYTSPEEIDAQLQAEK Unmodified 2076.0124 0.012362185 2292 Q13442 PDAP1 28 kDa heat- and acid-stable phosphoprotein yes yes 0 0 1 By MS/MS 2 0 1 1 63.69 59.931 3 0.031702 74456 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 18.156 5.1185 2755800 0 0 2755800 0 0 0 0 0 0 0 0 0 0 0 0 4497 2292 4062 39099 30984 30984 1 ARSDPLFSAQR Unmodified 1246.6418 0.64183343 4846 Q9UBL3 ASH2L Set1/Ash2 histone methyltransferase complex subunit ASH2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 35.571 35.811 3 0.0032088 39492 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 71.555 45.617 149040000 0 0 0 0 6912800 12317000 9315800 11018000 10663000 10914000 13636000 20814000 13610000 13013000 26830000 4498 4846 4063 39100;39101;39102;39103;39104;39105;39106;39107;39108;39109;39110 30985;30986;30987;30988;30989;30990 30988 2 ARSEAAEAGNGAETMAAEAESAQTR Oxidation (M) 2494.099 0.099021716 372 O43823 AKAP8 A-kinase anchor protein 8 yes yes 0 1 1 By MS/MS 10 0 1 1 33.279 33.41 3 0.0015633 36491 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 41.423 33.711 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4499 372 4064 39111 30991 30991 471 1 ARSEAAEAGNGAETMAAEAESAQTR Unmodified 2478.1041 0.10410709 372 O43823 AKAP8 A-kinase anchor protein 8 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 52.481 52.561 3 2.8492E-09 59406 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 51.473 47.311 62920000 0 0 0 3756900 5580300 8086400 7186200 0 5362900 0 8618700 7674600 8998100 7655800 0 4500 372 4064 39112;39113;39114;39115;39116;39117;39118;39119;39120 30992;30993;30994;30995;30996 30993 5 ARSEAAEAGNGAETMAAEAESAQTRVAPAPAAADAEVEQTDAESK Unmodified 4429.0212 0.02117191 372 O43823 AKAP8 A-kinase anchor protein 8 yes yes 0 0 2 By MS/MS 2 0 1 1 75.003 72.155 4 1.2567E-26 88115 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 59.434 58.185 11184000 0 0 11184000 0 0 0 0 0 0 0 0 0 0 0 0 4501 372 4065 39121 30997;30998 30998 2 ARSEDTGLDSVATR Unmodified 1476.7168 0.71684887 611 O94966 USP19 Ubiquitin carboxyl-terminal hydrolase 19 yes yes 0 0 1 By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 28.238 28.474 3 0.020823 30766 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 31.614 23.51 37584000 0 0 0 2443500 0 3138800 2369600 3179700 0 4982000 0 4980200 6208400 3302200 6979600 4502 611 4066 39122;39123;39124;39125;39126;39127;39128;39129;39130 30999 30999 1 ARSEQFINLR Unmodified 1232.6626 0.66256887 841 P07384 CAPN1 Calpain-1 catalytic subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 47.232 47.465 3 0.003863 52006 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.726 49.286 380860000 0 0 0 0 13481000 23951000 27357000 33605000 24243000 37511000 56588000 44397000 31392000 29538000 58793000 4503 841 4067 39131;39132;39133;39134;39135;39136;39137;39138;39139;39140;39141 31000;31001;31002;31003;31004;31005;31006;31007;31008;31009;31010 31003 9 ARSNPQVYMDIK Unmodified 1420.7133 0.71328381 5038 Q9UNP9 PPIE Peptidyl-prolyl cis-trans isomerase E yes yes 0 0 1 By MS/MS By matching 2 0 2 1 1 53.762 47.727 3 0.0033985 65535 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.951 41.92 95013000 91894000 0 3119800 0 0 0 0 0 0 0 0 0 0 0 0 4504 5038 4068 39142;39143 31011;31012 31012 2 ARSSAQLQTNYPSSDNSLYTNAK Unmodified 2515.1939 0.19390838 1841 P61244 MAX Protein max yes yes 0 0 1 By MS/MS 2 0 1 1 56.506 48.359 3 2.8171E-15 65978 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 91.238 87.361 38926000 38926000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4505 1841 4069 39144 31013;31014 31014 2 ARTEAQSLDSAVPLTNGDTEDDADK Unmodified 2618.1944 0.19436189 4730 Q9NXR5 ANKRD10 Ankyrin repeat domain-containing protein 10 yes yes 0 0 1 By MS/MS 2 0 1 1 64.67 56.391 3 0.036149 75962 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 34.106 30.771 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4506 4730 4070 39145 31015 31015 1 ARTSPYPGSK Unmodified 1062.5458 0.54580778 4206 Q9BW91 NUDT9 ADP-ribose pyrophosphatase, mitochondrial yes yes 0 0 1 By MS/MS 2 0 1 1 13.014 9.0186 2 0.0053078 13875 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 99.973 53.547 33349000 33349000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4507 4206 4071 39146 31016 31016 0 ARTVLQMDELK Oxidation (M) 1318.6915 0.69148574 1451 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 41.642 36.471 3 0.031532 50132 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.426 27.039 127540000 119810000 0 7731500 0 0 0 0 0 0 0 0 0 0 0 0 4508 1451 4072 39147;39148 31017;31018 31017 2 ARTVLQMDELK Unmodified 1302.6966 0.69657112 1451 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes yes 0 0 1 By MS/MS 2 0 1 1 65.212 56.923 3 0.0070842 76327 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.924 53.237 115340000 115340000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4509 1451 4072 39149 31019 31019 1 ARVALENDDRSEEEK Unmodified 1759.8337 0.83366954 4047 Q99700 ATXN2 Ataxin-2 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.57 3.96 3 4 1 2 1 1 1 1 18.123 16.906 3;4 0.0084555 22503 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 63.29 51.267 51217000 9591300 0 19280000 0 0 0 0 0 0 0 4757000 7359800 3074800 0 7154400 4510 4047 4073 39150;39151;39152;39153;39154;39155;39156 31020;31021;31022;31023 31021 3 ARVANPSGNLTETYVQDRGDGMYK Oxidation (M) 2657.2504 0.2503774 1124 P21333 FLNA Filamin-A yes yes 0 1 2 By MS/MS 2 0 2 2 59.302 51.076 3;4 6.0039E-14 69333 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.557 79.763 107940000 107940000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4511 1124 4074 39157;39158 31024;31025 31025 1611 1 ARVANPSGNLTETYVQDRGDGMYK Unmodified 2641.2555 0.25546278 1124 P21333 FLNA Filamin-A yes yes 0 0 2 By MS/MS 2 0 2 2 65.981 57.687 3;4 1.775E-68 77338 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 135.86 119.97 136750000 136750000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4512 1124 4074 39159;39160 31026;31027 31026 2 ARVEEASTPK Unmodified 1086.5669 0.56693715 1736 P54259 ATN1 Atrophin-1 yes yes 0 0 1 By MS/MS 2 0 1 1 9.7092 7.4654 2 0.020762 9774 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 91.265 34.536 11228000 0 0 11228000 0 0 0 0 0 0 0 0 0 0 0 0 4513 1736 4075 39161 31028 31028 0 ARVEELDRK Unmodified 1114.6095 0.60947067 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 0 2 By MS/MS 2 0 1 1 15.249 11.136 2 0.025564 16568 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.76 64.628 49031000 49031000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4514 5071 4076 39162 31029 31029 0 ARVEVERDNLAEDIMR Unmodified 1914.9582 0.95815855 870 P08670 VIM Vimentin yes yes 0 0 2 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 1 3 2 2 1 3 1 1 3 62.922 63.204 3;4 3.9873E-05 70727 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.378 68.677 537540000 0 0 0 0 0 20170000 2468000 34182000 14291000 24541000 10955000 69990000 8698600 10529000 341720000 4515 870 4077 39163;39164;39165;39166;39167;39168;39169;39170;39171;39172;39173;39174;39175;39176;39177;39178;39179;39180 31030;31031;31032;31033;31034;31035;31036;31037;31038;31039;31040;31041;31042;31043 31033 10 ARVEVERDNLAEDIMR Oxidation (M) 1930.9531 0.95307317 870 P08670 VIM Vimentin yes yes 0 1 2 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 4 20 2 1 1 1 1 1 2 3 3 3 1 2 2 1 49.566 49.36 3;4 1.6138E-07 54388 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 109.35 88.514 2700700000 7398800 204880 168860 88101000 56396000 206570000 295760000 260560000 447980000 345680000 0 259200000 240330000 253430000 238930000 4516 870 4077 39181;39182;39183;39184;39185;39186;39187;39188;39189;39190;39191;39192;39193;39194;39195;39196;39197;39198;39199;39200;39201;39202;39203;39204 31044;31045;31046;31047;31048;31049;31050;31051;31052;31053;31054;31055;31056;31057;31058;31059;31060;31061;31062;31063 31060 1115 13 ARVITEEEK Unmodified 1073.5717 0.57168818 1203 P26373 RPL13 60S ribosomal protein L13 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 11.182 11.097 2 3.3108E-14 8753 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 187.22 114.73 355360000 0 0 187030000 7551500 8896500 9570200 10969000 8268300 10541000 15443000 0 28104000 22497000 20141000 26357000 4517 1203 4078 39205;39206;39207;39208;39209;39210;39211;39212;39213;39214;39215;39216 31064;31065;31066;31067;31068;31069;31070 31069 1 ARVREMEEEAEK Unmodified 1475.7038 0.70384134 3140 Q86U42 PABPN1 Polyadenylate-binding protein 2 yes yes 0 0 2 By MS/MS 2 0 1 1 23.502 18.526 3 0.014291 26429 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.352 55.952 117410000 117410000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4518 3140 4079 39217 31071 31071 1 ARVVYASATGASEPR Unmodified 1533.79 0.78995423 17 A3KN83 SBNO1 Protein strawberry notch homolog 1 yes yes 0 0 1 By MS/MS By matching By MS/MS 10 0 3 1 1 1 29.276 29.385 3 0.0046473 30622 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.493 31.894 27326000 0 0 0 0 3252600 0 6359600 0 0 0 0 0 0 0 17714000 4519 17 4080 39218;39219;39220 31072 31072 1 ARWTETYVR Unmodified 1180.5989 0.59890598 1776 P55884 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 37.693 37.85 3 0.024525 40468 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.567 23.901 32085000 0 0 0 2282000 0 2972000 2754400 3767100 2733000 0 0 0 4980400 4005000 8590900 4520 1776 4081 39221;39222;39223;39224;39225;39226;39227;39228 31073 31073 1 ASAAAGEAEETTR Acetyl (Protein N-term) 1304.5844 0.58443771 3165 Q86VE0 MYPOP Myb-related transcription factor, partner of profilin yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 36.575 36.678 2 0.00031197 40865 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 79.693 50.532 23908000 0 0 0 0 3495300 5333300 0 0 0 4656200 4276400 0 6146500 0 0 4521 3165 4082 39229;39230;39231;39232;39233;39234;39235;39236 31074;31075;31076;31077;31078;31079;31080;31081 31081 8 ASAAFSSVGSVITK Unmodified 1323.7034 0.70343063 1768 P55327 TPD52 Tumor protein D52 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.1 3.41 10 32 5 3 2 2 3 2 3 3 3 3 3 3 2 3 2 67.301 66.854 2;3 7.3342E-19 76480 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 150.06 98.611 5656200000 1024700000 1184900000 654650 113290000 150540000 158760000 202690000 299580000 150760000 269080000 449460000 486870000 266100000 276710000 622140000 4522 1768 4083 39237;39238;39239;39240;39241;39242;39243;39244;39245;39246;39247;39248;39249;39250;39251;39252;39253;39254;39255;39256;39257;39258;39259;39260;39261;39262;39263;39264;39265;39266;39267;39268;39269;39270;39271;39272;39273;39274;39275;39276;39277;39278 31082;31083;31084;31085;31086;31087;31088;31089;31090;31091;31092;31093;31094;31095;31096;31097;31098;31099;31100;31101;31102;31103;31104;31105;31106;31107;31108;31109;31110;31111;31112;31113;31114;31115;31116;31117;31118 31097 35 ASAAGAECELAR Unmodified 1204.5506 0.55063516 4281 Q9C0B0 UNK RING finger protein unkempt homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 27.633 28.103 2 0.013091 29278 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.676 42.343 4099800 0 0 0 0 0 0 0 0 0 0 4099800 0 0 0 0 4523 4281 4084 39279;39280;39281 31119;31120;31121 31119 3 ASAAPKPEPVPVQK Unmodified 1417.7929 0.79291434 3865 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 1 2 2 1 2 2 1 2 2 2 2 29.027 29.261 2;3 1.6356E-08 31239 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 93.478 85.503 829380000 0 0 0 38830000 24789000 58199000 48991000 40074000 40067000 77106000 87519000 104210000 78762000 55436000 175400000 4524 3865 4085 39282;39283;39284;39285;39286;39287;39288;39289;39290;39291;39292;39293;39294;39295;39296;39297;39298;39299;39300;39301 31122;31123;31124;31125;31126;31127;31128;31129;31130;31131;31132;31133;31134;31135;31136;31137;31138;31139;31140;31141 31137 19 ASACGAPGPGGALGSQAPSWYHR Acetyl (Protein N-term) 2296.0443 0.044347791 276 O15357 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 74.788 74.856 3 1.9721E-54 86392 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 85.945 77.952 63537000 0 0 0 2524200 0 7695500 4357400 7423900 4197800 10124000 0 0 6744800 7757600 12712000 4525 276 4086 39302;39303;39304;39305;39306;39307;39308;39309;39310 31142;31143;31144;31145;31146;31147;31148;31149;31150;31151 31144 10 ASACSTYAPETMMFLDK Unmodified 1921.826 0.82600666 2406 Q14432 PDE3A cGMP-inhibited 3',5'-cyclic phosphodiesterase A yes yes 0 0 0 By MS/MS 2 0 1 1 87.702 82.867 2 0.0005968 102996 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.552 75.926 21877000 0 21877000 0 0 0 0 0 0 0 0 0 0 0 0 0 4526 2406 4087 39311 31152 31152 1 ASAELALGENSEVLK Unmodified 1529.7937 0.7937022 730 P00505 GOT2 Aspartate aminotransferase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 1 4 1 73.219 67.855 2 3.9135E-38 86357 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 173.72 132.6 571220000 19847000 547010000 4358200 0 0 0 0 0 0 0 0 0 0 0 0 4527 730 4088 39312;39313;39314;39315;39316;39317 31153;31154;31155;31156;31157 31153 5 ASAELIEEEVAK Unmodified 1287.6558 0.65581174 961 P12081 HARS Histidine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.92 3.91 1 3 1 8 2 3 1 1 1 1 1 1 1 1 65.019 64.07 2 1.5797E-10 73122 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 126.31 80.155 2257900000 66800000 2049400000 0 6652300 0 6945300 9820700 9461000 0 0 25784000 19546000 0 18416000 45045000 4528 961 4089 39318;39319;39320;39321;39322;39323;39324;39325;39326;39327;39328;39329;39330 31158;31159;31160;31161;31162;31163 31160 6 ASAELQTLLMNQLTVK Unmodified 1758.955 0.95497065 4946 Q9UJX5 ANAPC4 Anaphase-promoting complex subunit 4 yes yes 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 85.474 85.53 3 0.041868 99304 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 25.054 13.614 117790000 0 0 0 3167600 8330000 10791000 7516800 0 8843700 14006000 22480000 11411000 5020400 7748000 18476000 4529 4946 4090 39331;39332;39333;39334;39335;39336;39337;39338;39339;39340;39341 31164 31164 1 ASAETPRPQPVDK Unmodified 1394.7154 0.7153923 3414 Q8ND24 RNF214 RING finger protein 214 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 17.683 17.917 3 0.00042915 18568 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 61.212 42.389 143970000 0 0 0 0 0 17313000 11733000 16491000 11523000 18239000 0 14637000 16262000 14494000 23281000 4530 3414 4091 39342;39343;39344;39345;39346;39347;39348;39349;39350 31165;31166;31167;31168;31169;31170 31165 3 ASAETVDPASLWEY Unmodified 1537.6937 0.69365381 2626 Q16658 FSCN1 Fascin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.1 2.7 1 9 1 1 1 1 1 1 1 1 1 1 90.839 91.446 2 1.9524E-23 90948 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 128.58 121.45 329920000 219600000 0 0 1629100 0 0 1142700 1190900 0 1508500 17077000 11860000 641340 10745000 64520000 4531 2626 4092 39351;39352;39353;39354;39355;39356;39357;39358;39359;39360 31171;31172;31173 31172 3 ASAFALQEQPVVNAVIDDTTK Unmodified 2216.1325 0.13247732 1385 P36957 DLST Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 92.572 88.513 3 0.00064389 109976 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 47.015 42.148 50257000 0 50257000 0 0 0 0 0 0 0 0 0 0 0 0 0 4532 1385 4093 39361;39362 31174 31174 1 ASAFNSWFENAEEDLTDPVRCNSLEEIK Unmodified 3270.4775 0.47753638 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS 2 0 2 2 97.61 89.479 3;4 2.2191E-66 116251 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 120.6 115.28 52450000 52450000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4533 2344 4094 39363;39364 31175;31176 31176 2 ASAGDTQAGPR Acetyl (Protein N-term) 1071.4945 0.49450049 682 O95716 RAB3D Ras-related protein Rab-3D yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 17.76 17.846 2 0.0039642 17893 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 47.706 38.313 11863000 0 0 0 3113000 0 0 0 3734400 2437900 2577800 0 0 0 0 0 4534 682 4095 39365;39366;39367;39368;39369;39370 31177;31178;31179;31180;31181 31177 5 ASAGHAVSIAQDDAGADDWETDPDFVNDVSEK Unmodified 3331.4389 0.43890227 2399 Q14247 CTTN Src substrate cortactin yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 81.556 76.227 3 4.7084E-51 97503 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 103.68 102.99 24836000 13406000 0 11430000 0 0 0 0 0 0 0 0 0 0 0 0 4535 2399 4096 39371;39372 31182;31183;31184 31182 3 ASAGHVAVSSPTPETGPLQR Unmodified 1960.9967 0.99665254 1463 P42695 NCAPD3 Condensin-2 complex subunit D3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.353 47.517 3 6.4863E-21 53336 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 95.954 79.77 315480000 0 0 0 18544000 18691000 25235000 23133000 21019000 16332000 33045000 29557000 40653000 26505000 24522000 38243000 4536 1463 4097 39373;39374;39375;39376;39377;39378;39379;39380;39381;39382;39383;39384 31185;31186;31187;31188;31189;31190;31191;31192;31193;31194;31195;31196;31197;31198;31199 31186 15 ASAGPQPLLVQSCK Unmodified 1454.7551 0.75514863 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 55.772 50.431 2 8.6486E-31 65094 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 148.18 122.8 348230000 0 348230000 0 0 0 0 0 0 0 0 0 0 0 0 0 4537 5187 4098 39385;39386 31200;31201;31202 31201 3 ASAGTRVPVQEK Unmodified 1241.6728 0.67279921 1602 P49815 TSC2 Tuberin yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 20.903 16.785 2;3 9.2323E-05 24077 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.3 30.072 76680000 68777000 0 7903900 0 0 0 0 0 0 0 0 0 0 0 0 4538 1602 4099 39387;39388;39389 31203;31204;31205 31204 1 ASAHSIVECDPVRK Unmodified 1567.7777 0.77767498 1695 P52732 KIF11 Kinesin-like protein KIF11 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.48 3.14 4 17 2 2 1 1 2 2 1 2 2 1 1 2 2 30.328 29.519 3;4 1.4706E-34 43303 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 152 136.06 611340000 385240000 0 25353000 0 5331400 14056000 5173100 13704000 10354000 40820000 23804000 16763000 10285000 18212000 42240000 4539 1695 4100 39390;39391;39392;39393;39394;39395;39396;39397;39398;39399;39400;39401;39402;39403;39404;39405;39406;39407;39408;39409;39410 31206;31207;31208;31209;31210;31211;31212;31213;31214 31209 9 ASALEQFVNSVR Acetyl (Protein N-term) 1361.6939 0.69392858 5042 Q9UNS2 COPS3 COP9 signalosome complex subunit 3 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 2 1 1 97.776 97.878 2 4.16E-157 113730 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 226.71 215.11 61801000 0 0 0 0 1934900 1528500 1606400 2283300 0 15143000 10641000 6153500 988440 4954500 16567000 4540 5042 4101 39411;39412;39413;39414;39415;39416;39417;39418;39419;39420;39421;39422 31215;31216;31217;31218;31219;31220;31221;31222;31223;31224;31225;31226 31218 12 ASALQDMMR Unmodified 1021.4685 0.46848544 344 O43592 XPOT Exportin-T yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 52.773 53.319 2 0.003452 59368 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 104.06 86.817 30575000 0 0 0 0 0 0 0 0 0 0 10622000 0 0 0 19952000 4541 344 4102 39423;39424 31227 31227 1 ASALRHEEQPAPGYDTHGR Unmodified 2090.9882 0.98821312 2136 Q07157 TJP1 Tight junction protein ZO-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 21.335 21.466 4 0.001532 22371 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 42.705 33.886 174390000 0 0 0 20046000 8561500 0 22492000 16056000 18812000 26379000 22718000 0 16656000 22669000 0 4542 2136 4103 39425;39426;39427;39428;39429;39430;39431;39432;39433 31228;31229;31230 31230 2 ASAPAADPPRYTFAPSVSLNK Unmodified 2159.1011 0.10111761 4585 Q9NR12 PDLIM7 PDZ and LIM domain protein 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 72.003 72.117 3 0.0010981 83025 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 24.548 16.594 58746000 0 0 0 3928700 0 5792800 3886700 4886200 3552700 4986700 6714300 3501100 3534900 5951800 12010000 4543 4585 4104 39434;39435;39436;39437;39438;39439;39440;39441;39442;39443;39444 31231;31232;31233;31234 31234 4 ASAPESGLLSK Unmodified 1058.5608 0.56078914 3779 Q96CN7 ISOC1 Isochorismatase domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.25 3.34 2 1 1 1 2 1 41.914 37.918 2 9.8219E-05 49039 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.71 69.842 389280000 13451000 358190000 0 0 0 0 0 0 0 0 0 0 0 0 17636000 4544 3779 4105 39445;39446;39447;39448 31235;31236;31237;31238 31236 2 ASAPLACAAAAPLTSPSITSASLEAEPSGR Unmodified 2853.4178 0.41783666 3112 Q7Z6J0 SH3RF1 E3 ubiquitin-protein ligase SH3RF1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 83.484 83.547 3 3.3023E-35 96485 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.108 71.077 94491000 0 0 0 1558800 5843800 5837100 5515300 8566200 7582400 9390100 13060000 9583500 6304100 8468800 12781000 4545 3112 4106 39449;39450;39451;39452;39453;39454;39455;39456;39457;39458;39459;39460 31239;31240;31241;31242;31243;31244;31245;31246;31247;31248;31249;31250 31242 12 ASAPPPAPSEPPAAPR Unmodified 1511.7732 0.77324153 3527 Q8TF64 GIPC3 PDZ domain-containing protein GIPC3 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 40.757 41.079 2 0.011288 44948 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.284 25.133 18747000 0 0 0 0 0 3808900 0 0 0 3979200 0 0 3492200 0 7466900 4546 3527 4107 39461;39462;39463;39464;39465 31251;31252;31253 31252 3 ASAPYNHHGSR Unmodified 1195.5483 0.5482674 3357 Q8N684 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 5.5657 5.6811 3 0.00051687 2952 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.062 65.843 158590000 0 0 0 14536000 14158000 15157000 17660000 20109000 21340000 0 11252000 0 15264000 12382000 16735000 4547 3357 4108 39466;39467;39468;39469;39470;39471;39472;39473;39474;39475;39476 31254;31255;31256;31257;31258;31259;31260;31261;31262;31263;31264 31256 5 ASAPYNHHGSRDSGPPPSTVSEAEFEDIMK Oxidation (M) 3228.4418 0.44181958 3357 Q8N684 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 yes yes 0 1 1 By MS/MS 2 0 1 1 65.808 57.52 4 3.2316E-11 77194 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.683 52.63 18745000 18745000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4548 3357 4109 39477 31265 31265 4931 1 ASAPYNHHGSRDSGPPPSTVSEAEFEDIMK Unmodified 3212.4469 0.44690496 3357 Q8N684 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 yes yes 0 0 1 By MS/MS 2 0 1 1 78.513 70.383 5 2.0902E-07 92485 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.901 40.527 11469000 11469000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4549 3357 4109 39478 31266 31266 1 ASAQDAGESCTPEAEGRPEEPCGEK Unmodified 2661.0919 0.091887427 4356 Q9H211 CDT1 DNA replication factor Cdt1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 2 1 1 1 1 1 1 1 1 1 1 1 29.582 29.727 3 8.5341E-29 32109 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 80.102 77.849 69407000 0 0 0 4370600 4427300 5279900 6297900 5007600 4433400 6319500 6647700 0 10937000 6156200 9530300 4550 4356 4110 39479;39480;39481;39482;39483;39484;39485;39486;39487;39488;39489;39490;39491 31267;31268;31269;31270;31271;31272;31273;31274;31275;31276;31277;31278;31279;31280 31276 14 ASAQQENSSTCIGSAIK Unmodified 1750.8156 0.81557663 4733 Q9NXV6 CDKN2AIP CDKN2A-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.6 37.78 2 3.6377E-111 41290 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 240.59 220.39 267390000 0 0 0 14419000 14264000 23259000 22560000 17288000 15773000 25991000 27152000 24229000 26128000 22004000 34323000 4551 4733 4111 39492;39493;39494;39495;39496;39497;39498;39499;39500;39501;39502;39503 31281;31282;31283;31284;31285;31286;31287;31288;31289;31290;31291;31292 31290 12 ASASGSGAQVGGPISSGSSASSVTVTR Unmodified 2364.1517 0.15170921 757 P02545 LMNA Prelamin-A/C;Lamin-A/C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 2 1 3 2 1 1 1 2 1 1 2 51.135 51.308 2;3 2.7052E-60 57995 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 109.19 101.74 224470000 0 0 0 16130000 23812000 7414200 27860000 15094000 0 13163000 19976000 21565000 0 17920000 61534000 4552 757 4112 39504;39505;39506;39507;39508;39509;39510;39511;39512;39513;39514;39515;39516;39517;39518;39519;39520 31293;31294;31295;31296;31297;31298;31299;31300;31301;31302;31303;31304;31305;31306;31307;31308;31309;31310;31311 31304 19 ASASPGENDSGTGGEEPQRDK Unmodified 2087.8992 0.89918292 2594 Q15911 ZFHX3 Zinc finger homeobox protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 10.966 11.101 3 4.1935E-08 10327 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 70.414 68.636 40389000 0 0 0 1541200 1749400 2932200 3257900 3231000 2580100 3249100 2871700 6552700 4287200 3234300 4901800 4553 2594 4113 39521;39522;39523;39524;39525;39526;39527;39528;39529;39530;39531;39532 31312;31313;31314;31315;31316;31317;31318;31319;31320;31321;31322 31320 11 ASASPSTSSTSSRPK Unmodified 1449.7059 0.70594983 468 O75167 PHACTR2 Phosphatase and actin regulator 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 6.6036 6.3054 3 0.00041397 4836 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 70.529 60.995 33527000 8936200 0 0 1716000 1833500 0 3191100 1434500 0 4789200 0 4983000 0 3489100 3154400 4554 468 4114 39533;39534;39535;39536;39537;39538;39539;39540;39541;39542 31323;31324;31325;31326 31325 3 ASASTQPAALSAEQAK Acetyl (Protein N-term) 1571.7791 0.77911477 4037 Q99622 C12orf57 Protein C10 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.27 3.47 2 1 12 3 1 1 1 1 1 1 1 1 1 1 1 1 54.824 55.129 2;3 1.7306E-28 53861 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 136.7 124.83 268200000 36952000 0 0 11149000 12333000 14524000 13297000 13530000 10702000 21548000 28316000 31196000 18141000 21031000 35483000 4555 4037 4115 39543;39544;39545;39546;39547;39548;39549;39550;39551;39552;39553;39554;39555;39556;39557 31327;31328;31329;31330;31331;31332;31333;31334;31335;31336;31337;31338;31339;31340;31341;31342 31340 16 ASASYHISNLLEK Acetyl (Protein N-term) 1473.7464 0.74635808 3170 Q86VP6 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS 6.32 3.89 7 2 10 3 4 2 1 1 1 1 1 1 1 1 1 1 78.255 76.46 2 1.8782E-89 96929 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 234.63 234.63 4932100000 671470000 3436300000 156020000 0 23457000 95741000 37314000 38486000 32800000 0 74314000 74546000 36462000 72787000 182420000 4556 3170 4116 39558;39559;39560;39561;39562;39563;39564;39565;39566;39567;39568;39569;39570;39571;39572;39573;39574;39575;39576 31343;31344;31345;31346;31347;31348;31349;31350;31351;31352;31353;31354 31348 8 ASATIIEPAGESDNPLR Unmodified 1739.869 0.86899241 3871 Q96HW7 INTS4 Integrator complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 66.319 66.416 2 3.0205E-36 75330 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 128.85 112.59 79934000 0 0 0 4339000 4901200 0 5696600 7643200 5331700 10441000 8508200 11933000 7501300 5831500 7806200 4557 3871 4117 39577;39578;39579;39580;39581;39582;39583;39584;39585;39586;39587 31355;31356;31357;31358;31359;31360;31361;31362;31363;31364;31365 31357 11 ASATSVSSAGEQAAGDPEGR Unmodified 1846.8293 0.82931244 4257 Q9BZ23 PANK2 Pantothenate kinase 2, mitochondrial yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching 10 0 14 2 2 2 2 2 2 1 1 32.085 32.235 2;3 3.9767E-87 35067 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 197.19 182.31 786570000 0 0 0 66378000 181580000 121650000 0 0 0 86847000 121490000 199130000 0 2215100 7278500 4558 4257 4118 39588;39589;39590;39591;39592;39593;39594;39595;39596;39597;39598;39599;39600;39601 31366;31367;31368;31369 31368 3 ASATSVSSAGEQAAGDPEGRR Unmodified 2002.9304 0.93042347 4257 Q9BZ23 PANK2 Pantothenate kinase 2, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 28.51 28.618 3 0.00059632 30560 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 37.169 30.219 36004000 0 0 0 3365200 4364300 4034600 0 0 0 5732200 6679700 11828000 0 0 0 4559 4257 4119 39602;39603;39604;39605;39606;39607 31370;31371;31372;31373;31374;31375;31376 31374 7 ASAVESLRPSQQAPSGSDLANPQAQK Unmodified 2636.3154 0.3154205 3666 Q92817 EVPL Envoplakin yes yes 0 0 1 By MS/MS By matching 10 0 2 1 1 53.613 53.323 3 6.0473E-05 61251 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 35.179 28.721 8175500 0 0 0 5236000 0 0 2939400 0 0 0 0 0 0 0 0 4560 3666 4120 39608;39609 31377 31377 1 ASAVSELSPR Unmodified 1015.5298 0.52982336 5122 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 2 1 1 1 1 35.152 35.438 2 0.00092144 38858 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 113.71 78.073 199620000 0 0 0 10127000 0 0 0 14542000 13156000 25587000 3325200 39289000 34752000 26269000 32574000 4561 5122 4121 39610;39611;39612;39613;39614;39615;39616;39617;39618;39619;39620 31378;31379;31380;31381;31382;31383;31384;31385;31386 31383 8 ASAVSPANLPAVLLQPR Acetyl (Protein N-term) 1744.9836 0.98356866 1663 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 1 2 2 2 2 2 2 2 2 2 2 96.945 97.035 2;3 1.6466E-82 112905 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 179.19 175.52 1043900000 0 0 0 12971000 41692000 62788000 52650000 67332000 57715000 181340000 113000000 139210000 33938000 96046000 185250000 4562 1663 4122 39621;39622;39623;39624;39625;39626;39627;39628;39629;39630;39631;39632;39633;39634;39635;39636;39637;39638;39639;39640;39641;39642;39643 31387;31388;31389;31390;31391;31392;31393;31394;31395;31396;31397;31398;31399;31400;31401;31402;31403;31404;31405;31406;31407;31408;31409;31410;31411 31392 22 ASAVTAMGQLSSQGLHAPTSPEHAEAR Unmodified 2703.3035 0.3034756 2959 Q6PJG6 BRAT1 BRCA1-associated ATM activator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 65.801 66.041 4 8.7065E-18 74902 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.282 56.596 49869000 0 0 0 0 0 4113800 0 5757500 0 5866100 0 8980900 0 8554600 16596000 4563 2959 4123 39644;39645;39646;39647;39648;39649 31412;31413;31414;31415;31416;31417;31418 31414 7 ASAVYQALQK Unmodified 1077.5819 0.58185893 2827 Q5VWZ2 LYPLAL1 Lysophospholipase-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 46.049 40.608 2 0.0030283 52636 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.523 54.076 93660000 39866000 49226000 4567900 0 0 0 0 0 0 0 0 0 0 0 0 4564 2827 4124 39650;39651;39652;39653 31419;31420;31421;31422;31423 31420 4 ASAYEALEK Unmodified 980.48148 0.48147619 2577 Q15785 TOMM34 Mitochondrial import receptor subunit TOM34 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 2 1 1 33.103 33.311 2 0.0035091 36689 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 107.57 65.465 1177700000 0 0 0 105620000 93990000 132000000 0 102420000 88420000 143020000 0 258120000 0 164240000 89895000 4565 2577 4125 39654;39655;39656;39657;39658;39659;39660;39661;39662;39663 31424;31425;31426;31427;31428;31429;31430;31431;31432;31433;31434 31433 10 ASAYVFASPGCK Unmodified 1256.586 0.58595803 701 O95861 BPNT1 3'(2'),5'-bisphosphate nucleotidase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 55.161 49.464 2 0.00058695 61531 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 112.36 105.3 309590000 38651000 269370000 1571900 0 0 0 0 0 0 0 0 0 0 0 0 4566 701 4126 39664;39665;39666;39667 31435;31436;31437 31435 3 ASCASIDIEDATQHLR Acetyl (Protein N-term) 1827.8421 0.84212573 2927 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 80.609 80.691 2 2.4953E-20 93326 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 135.6 119.07 47549000 0 0 0 0 3012900 4575500 2022600 0 3021300 7100000 0 7484900 3393600 4845000 12093000 4567 2927 4127 39668;39669;39670;39671;39672;39673;39674;39675;39676;39677 31438;31439;31440;31441;31442;31443;31444;31445;31446;31447 31439 10 ASCILQLVK Unmodified 1030.5845 0.58450147 193 O14617 AP3D1 AP-3 complex subunit delta-1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 73.947 74.009 2 0.016224 85525 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 56.721 29.857 72885000 0 0 0 0 4397200 10895000 4705800 0 9999800 8584100 12917000 0 13264000 8121400 0 4568 193 4128 39678;39679;39680;39681;39682;39683;39684;39685 31448 31448 1 ASCLYGQLPK Unmodified 1135.5696 0.56957969 879 P09211 GSTP1 Glutathione S-transferase P yes yes 0 0 0 By MS/MS 10 0 1 1 53.015 52.365 2 0.0082115 59911 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 60.59 44.05 26230000 0 0 0 26230000 0 0 0 0 0 0 0 0 0 0 0 4569 879 4129 39686 31449 31449 1 ASCPAAAPLMERK Unmodified 1400.6904 0.69043988 3776 Q96CD2 PPCDC Phosphopantothenoylcysteine decarboxylase yes yes 0 0 1 By MS/MS 2 0 1 1 45.011 38.146 3 0.0043404 52296 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.964 40.131 35345000 35345000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4570 3776 4130 39687 31450 31450 1 ASDAFHFFQSGQAK Unmodified 1539.7106 0.71064128 465 O75153 CLUH Clustered mitochondria protein homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67.237 66.202 3 0.0016311 87618 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.285 58.529 377810000 202690000 50489000 16903000 3519400 3614100 10779000 5534900 5802800 5802900 7401200 9763400 15406000 6828300 10311000 22963000 4571 465 4131 39688;39689;39690;39691;39692;39693;39694;39695;39696;39697;39698;39699;39700;39701;39702 31451;31452;31453;31454 31451 3 ASDAVQSEPR Acetyl (Protein N-term) 1100.5098 0.5098162 2603 Q16512 PKN1 Serine/threonine-protein kinase N1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 27.414 27.615 2 0.00076787 29384 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 84.213 61.473 98484000 0 0 0 6196500 6729800 11737000 7793000 0 8758900 8309400 11329000 13951000 9083900 5374500 9221000 4572 2603 4132 39703;39704;39705;39706;39707;39708;39709;39710;39711;39712;39713 31455;31456;31457;31458;31459;31460;31461;31462;31463;31464 31460 10 ASDEVPLAPR Unmodified 1053.5455 0.54547343 3478 Q8TB61 SLC35B2 Adenosine 3'-phospho 5'-phosphosulfate transporter 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.382 42.559 2 0.0027303 46318 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.676 66.007 95124000 0 0 0 3978500 5125800 7740700 7829200 7692700 6485000 10568000 10038000 11135000 9264400 7072700 8194000 4573 3478 4133 39714;39715;39716;39717;39718;39719;39720;39721;39722;39723;39724;39725 31465;31466;31467;31468;31469;31470;31471;31472;31473;31474 31469 10 ASDEVTRLAK Unmodified 1088.5826 0.58258722 1073 P18206 VCL Vinculin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 26.84 22.589 2 1.1626E-12 29738 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 185.81 99.678 459990000 36150000 355090000 68744000 0 0 0 0 0 0 0 0 0 0 0 0 4574 1073 4134 39726;39727;39728;39729 31475;31476;31477;31478;31479 31475 5 ASDGFPVYQEK Unmodified 1239.5772 0.57716749 3221 Q8IV38 ANKMY2 Ankyrin repeat and MYND domain-containing protein 2 yes yes 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 47.631 47.779 2 0.046254 54054 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 35.826 22.372 9561400 0 0 0 0 0 3949800 1918300 0 0 0 0 0 3693300 0 0 4575 3221 4135 39730;39731;39732 31480 31480 1 ASDLEDEESAAR Unmodified 1291.5528 0.55280323 3167 Q86VM9 ZC3H18 Zinc finger CCCH domain-containing protein 18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.808 25.011 2 2.4838E-05 26402 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 109.42 80.332 62677000 0 0 0 3623100 2751000 3811800 4696300 6103000 3404600 3624800 6676200 5382900 6822400 4849800 10931000 4576 3167 4136 39733;39734;39735;39736;39737;39738;39739;39740;39741;39742;39743;39744 31481;31482;31483;31484;31485;31486;31487;31488;31489;31490;31491;31492;31493;31494 31488 14 ASDMLIR Oxidation (M) 820.41129 0.41128813 1596 P49756 RBM25 RNA-binding protein 25 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 3 2 2 1 22.93 23.134 2 0.015834 24682 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 83.614 40.614 395150000 0 0 0 22620000 20649000 23911000 31466000 27132000 26047000 41071000 43531000 55076000 40605000 38311000 24728000 4577 1596 4137 39745;39746;39747;39748;39749;39750;39751;39752;39753;39754;39755;39756;39757;39758;39759;39760;39761;39762;39763;39764;39765;39766;39767;39768 31495;31496;31497;31498;31499;31500;31501;31502 31496 2564 8 ASDMLIR Unmodified 804.41637 0.41637351 1596 P49756 RBM25 RNA-binding protein 25 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 36.353 36.593 2 0.02333 38903 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.986 47.985 218290000 0 0 0 9691000 0 13364000 17197000 15770000 13771000 20935000 18760000 26819000 18764000 25336000 37887000 4578 1596 4137 39769;39770;39771;39772;39773;39774;39775;39776;39777;39778;39779 31503;31504;31505;31506;31507;31508;31509 31504 7 ASDNQGVPVLVLANK Unmodified 1523.8308 0.83075641 1586 P49703 ARL4D ADP-ribosylation factor-like protein 4D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.312 76.37 2 0.00083589 87595 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.344 46.03 114270000 0 0 0 4144400 7356700 6722400 9473200 9010200 8122300 10696000 16319000 12138000 10603000 8156600 11525000 4579 1586 4138 39780;39781;39782;39783;39784;39785;39786;39787;39788;39789;39790;39791 31510;31511;31512;31513;31514;31515;31516;31517;31518 31513 9 ASDPDEAGGPEGSEAVQSGTPEEPEPELEAEASK Unmodified 3395.4648 0.46484225 449 O60936 NOL3 Nucleolar protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 64.431 64.558 3 3.5493E-26 73976 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 57.078 55.243 51849000 0 0 0 4612600 0 0 4856800 5290300 5264000 4541400 13658000 0 0 4648600 8976400 4580 449 4139 39792;39793;39794;39795;39796;39797;39798;39799 31519;31520;31521;31522;31523;31524 31521 6 ASDPGLPAEEPK Unmodified 1209.5877 0.58773217 1224 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.135 36.316 2 6.4874E-08 40135 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 118.4 92.298 181430000 0 0 0 8599800 11243000 16694000 9989600 11297000 8878600 13279000 16362000 22931000 18445000 21182000 22529000 4581 1224 4140 39800;39801;39802;39803;39804;39805;39806;39807;39808;39809;39810;39811 31525;31526;31527;31528;31529;31530;31531;31532;31533 31526 8 ASDSELER Unmodified 905.40904 0.40903953 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 9.4334 9.5305 2 0.01661 7973 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 66.993 24.899 18456000 0 0 0 3429300 0 0 5100800 0 0 3263300 0 0 4273400 2388800 0 4582 2501 4141 39812;39813;39814;39815;39816 31534;31535;31536 31536 3 ASDSPIDLFYGDFFGDISEAVIQK Unmodified 2633.2537 0.25371467 5118 Q9Y2T3 GDA Guanine deaminase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.5 0.5 4 4 3 4 1 102.29 98.006 2;3 1.1822E-47 121449 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.02 122.56 357560000 264150000 90369000 3038700 0 0 0 0 0 0 0 0 0 0 0 0 4583 5118 4142 39817;39818;39819;39820;39821;39822;39823;39824 31537;31538;31539;31540;31541;31542;31543;31544;31545;31546;31547 31537 11 ASDTSLTQGLK Unmodified 1119.5772 0.57716749 1 A0A0B4J2F2;P57059 LOC102724428;SIK1 Serine/threonine-protein kinase SIK1 yes no 0 0 0 By MS/MS 2 0 2 2 69.64 63.771 2 0.014332 81122 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.95 34.082 32809000 0 32809000 0 0 0 0 0 0 0 0 0 0 0 0 0 4584 1 4143 39825;39826 31548;31549 31549 1 ASDVHEVR Unmodified 911.44609 0.44609374 1000 P14618 PKM Pyruvate kinase PKM yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 4.0981 1.3269 2 0.0121 5286 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.19 56.555 35996000 30537000 0 5459100 0 0 0 0 0 0 0 0 0 0 0 0 4585 1000 4144 39827;39828 31550;31551 31550 2 ASDVHEVRK Unmodified 1039.5411 0.54105675 1000 P14618 PKM Pyruvate kinase PKM yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 6 2 3 2 3 5.2078 2.2654 2 0.0008054 3842 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 151.44 103.84 13207000000 9962600000 1990700000 1253400000 0 0 0 0 0 0 0 0 0 0 0 0 4586 1000 4145 39829;39830;39831;39832;39833;39834;39835;39836 31552;31553;31554;31555;31556;31557;31558 31553 6 ASEAASPLPDSPGDK Unmodified 1440.6733 0.67325272 2854 Q68CZ2 TNS3 Tensin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 37.242 37.422 2 1.0662E-22 41727 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 143.79 124.55 131620000 0 0 0 8004700 6823800 11643000 11509000 8946400 6861500 13319000 11717000 9715500 14587000 11787000 16709000 4587 2854 4146 39837;39838;39839;39840;39841;39842;39843;39844;39845;39846;39847;39848;39849 31559;31560;31561;31562;31563;31564;31565;31566;31567;31568;31569;31570;31571;31572 31560 14 ASEAGEVPFNHEILR Unmodified 1667.8267 0.82673367 3053 Q7L5N1 COPS6 COP9 signalosome complex subunit 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 19 1 2 1 1 3 1 2 2 2 2 1 1 64.231 64.334 2;3 3.3068E-20 73672 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 115.18 90.793 373670000 0 0 0 14980000 17004000 35382000 21789000 28974000 21150000 52276000 42904000 44136000 37182000 39574000 18322000 4588 3053 4147 39850;39851;39852;39853;39854;39855;39856;39857;39858;39859;39860;39861;39862;39863;39864;39865;39866;39867;39868 31573;31574;31575;31576;31577;31578;31579;31580;31581;31582;31583;31584;31585;31586;31587;31588;31589 31576 11 ASEAQPPVAR Unmodified 1024.5302 0.53015772 2289 Q13428 TCOF1 Treacle protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 18.018 18.223 2 1.1106E-06 17217 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 135.77 116.67 126490000 0 0 0 12031000 12073000 0 12570000 11482000 8137000 0 17536000 20542000 0 13451000 18672000 4589 2289 4148 39869;39870;39871;39872;39873;39874;39875;39876;39877 31590;31591;31592;31593;31594;31595;31596;31597;31598 31591 8 ASEDIAK Acetyl (Protein N-term) 774.37595 0.37594848 1495 P46060 RANGAP1 Ran GTPase-activating protein 1 yes yes 1 0 0 By MS/MS 1 0 1 1 93.221 98.484 1 0.02879 75902 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 113.7 40.657 11706000 11706000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4590 1495 4149 39878 31599 31599 0 ASEEHLK Unmodified 812.40283 0.40283194 1138 P22392 NME2 Nucleoside diphosphate kinase B yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 0.043841 -3.2818 2 0.032088 19 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.866 53.316 10232000 0 10232000 0 0 0 0 0 0 0 0 0 0 0 0 0 4591 1138 4150 39879;39880 31600 31600 1 ASEELDGLFR Unmodified 1135.551 0.55095274 2450 Q14814 MEF2D Myocyte-specific enhancer factor 2D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.524 72.592 2 0.0020141 82609 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 98.233 52.104 114190000 0 0 0 6049000 5132400 8929400 8697400 6801300 7584000 8476900 13305000 11282000 12074000 9896100 15966000 4592 2450 4151 39881;39882;39883;39884;39885;39886;39887;39888;39889;39890;39891;39892 31601;31602;31603;31604;31605;31606;31607;31608;31609;31610;31611;31612;31613;31614 31609 14 ASEELDGLFRR Unmodified 1291.6521 0.65206377 2450 Q14814 MEF2D Myocyte-specific enhancer factor 2D yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.363 63.456 3 6.4572E-06 71607 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 106.29 95.681 228790000 0 0 0 12762000 6282800 18777000 17435000 17668000 13356000 15547000 16857000 20500000 22664000 25945000 40995000 4593 2450 4152 39893;39894;39895;39896;39897;39898;39899;39900;39901;39902;39903;39904 31615;31616;31617;31618;31619;31620;31621;31622;31623;31624 31618 10 ASEELQK Acetyl (Protein N-term) 845.41306 0.41306227 4497 Q9HB71 CACYBP Calcyclin-binding protein yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.57 3.06 5 23 2 2 1 2 2 2 1 2 2 2 2 2 2 2 2 23.399 23.253 1;2 0.0061901 23300 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 110.61 20.938 1101800000 118830000 71010000 10131000 42361000 28497000 102670000 9673200 49303000 29578000 114220000 109070000 100640000 72656000 96501000 146640000 4594 4497 4153 39905;39906;39907;39908;39909;39910;39911;39912;39913;39914;39915;39916;39917;39918;39919;39920;39921;39922;39923;39924;39925;39926;39927;39928;39929;39930;39931;39932 31625;31626;31627;31628;31629;31630;31631;31632;31633;31634;31635;31636 31633 9 ASEENLLSSSSVPSADRDSSPTTNSK Unmodified 2665.2315 0.23147568 4596 Q9NRA8 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 2 2 1 53.42 53.441 3 1.6571E-13 60352 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 63.376 56.578 53155000 0 0 0 5018700 6271800 0 7801200 8318700 0 0 13964000 11780000 0 0 0 4595 4596 4154 39933;39934;39935;39936;39937;39938;39939;39940;39941 31637;31638;31639;31640;31641;31642;31643;31644 31637 8 ASEETLQSLK Unmodified 1104.5663 0.56626845 4866 Q9UDX3 SEC14L4 SEC14-like protein 4 yes yes 0 0 0 By MS/MS 2 0 1 1 41.375 36.279 2 0.0022879 47191 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.6 59.025 15168000 0 15168000 0 0 0 0 0 0 0 0 0 0 0 0 0 4596 4866 4155 39942 31645 31645 1 ASEEYIQRLLAEEEEEEK Unmodified 2194.0277 0.027737478 3289 Q8IYW5 RNF168 E3 ubiquitin-protein ligase RNF168 yes yes 0 0 1 By MS/MS 2 0 1 1 85.759 77.629 3 1.6285E-10 101257 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.387 74.834 10176000 10176000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4597 3289 4156 39943 31646 31646 1 ASEGPAFFPGR Unmodified 1134.5458 0.54580778 4625 Q9NSD9 FARSB Phenylalanine--tRNA ligase beta subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 59.556 59.728 2 0.00047862 67915 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 83.948 41.349 91269000 0 0 0 5259100 0 5235800 0 5761900 4643700 6332200 12003000 11102000 7977800 10290000 22664000 4598 4625 4157 39944;39945;39946;39947;39948;39949;39950;39951;39952;39953 31647;31648;31649;31650;31651;31652;31653;31654;31655 31651 8 ASEITGLSSEGLAR Unmodified 1389.71 0.70997257 4085 Q9BQ50 TREX2 Three prime repair exonuclease 2 yes yes 0 0 0 By MS/MS 10 0 1 1 59.426 58.745 2 0.0003617 67569 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 75.566 59.368 13729000 0 0 0 13729000 0 0 0 0 0 0 0 0 0 0 0 4599 4085 4158 39954 31656 31656 1 ASELATLIQTK Unmodified 1173.6605 0.66050319 659 O95425 SVIL Supervillin yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 75.942 72.1 2 0.011124 90260 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.719 37.638 14464000 0 13811000 652910 0 0 0 0 0 0 0 0 0 0 0 0 4600 659 4159 39955;39956 31657 31657 1 ASELEPEVQAIDR Acetyl (Protein N-term) 1497.7311 0.73110195 3247 Q8IWV8 UBR2 E3 ubiquitin-protein ligase UBR2 yes yes 1 0 0 By MS/MS By MS/MS 10 0 2 1 1 80.429 80.507 2 0.0022423 93431 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 58.37 36.377 2433800 0 0 0 0 0 0 0 0 0 0 0 0 2433800 0 0 4601 3247 4160 39957;39958 31658;31659 31659 2 ASELEPEVQAIDRSLLECSAEEIAGK Acetyl (Protein N-term) 2885.3964 0.39643252 3247 Q8IWV8 UBR2 E3 ubiquitin-protein ligase UBR2 yes yes 1 0 1 By MS/MS 3 0 1 1 99.031 95.68 3 2.0771E-05 114830 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 50.029 47.806 5293800 0 5293800 0 0 0 0 0 0 0 0 0 0 0 0 0 4602 3247 4161 39959 31660 31660 1 ASELGARDDGGCTELAK Acetyl (Protein N-term) 1790.8105 0.81049126 4993 Q9ULG1 INO80 DNA helicase INO80 yes yes 1 0 1 By MS/MS 2 0 1 1 53.77 47.978 2 6.0976E-16 62196 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.88 87.249 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4603 4993 4162 39960 31661 31661 1 ASELGHSLNENVLK Unmodified 1509.7787 0.77872084 3362 Q8N6T3 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 52.225 51.53 2;3 0.00055088 68788 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.136 46.673 292980000 0 46538000 3759600 12602000 14284000 22950000 17536000 0 19667000 31269000 30474000 25430000 0 17970000 50502000 4604 3362 4163 39961;39962;39963;39964;39965;39966;39967;39968;39969;39970;39971;39972 31662;31663;31664 31662 2 ASELGHSLNENVLKPAQEK Unmodified 2063.0647 0.064732107 3362 Q8N6T3 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.72 2.93 4 21 2 2 2 2 1 2 2 1 1 2 2 2 2 2 51.689 50.804 3;4 0 56480 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 256.49 247.99 1342800000 22862000 0 26225000 55431000 82517000 0 117740000 148030000 50624000 57334000 149290000 154920000 149180000 104850000 223750000 4605 3362 4164 39973;39974;39975;39976;39977;39978;39979;39980;39981;39982;39983;39984;39985;39986;39987;39988;39989;39990;39991;39992;39993;39994;39995;39996;39997 31665;31666;31667;31668;31669;31670;31671;31672;31673;31674;31675;31676;31677;31678;31679;31680;31681;31682;31683;31684;31685;31686;31687 31675 21 ASELHLLETPLVVK Unmodified 1547.8923 0.89229404 3601 Q8WYP5 AHCTF1 Protein ELYS yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 81.603 81.724 3 0.00085202 94172 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.806 44.329 23678000 0 0 0 0 0 3448800 0 3768100 0 0 0 0 2380100 5271900 8808900 4606 3601 4165 39998;39999;40000;40001;40002 31688;31689 31689 2 ASELLLPAAASLR Unmodified 1310.7558 0.75580056 607 O94927 HAUS5 HAUS augmin-like complex subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 81.85 81.98 2 0.012991 94099 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 41.704 28.327 6254500 0 0 0 0 0 0 0 0 0 0 0 0 1513300 1940200 2801100 4607 607 4166 40003;40004;40005 31690;31691 31690 2 ASELNPESIYSVFK Unmodified 1582.7879 0.78788854 2947 Q6PGP7 TTC37 Tetratricopeptide repeat protein 37 yes yes 0 0 0 By MS/MS By MS/MS 2.2 0.4 4 1 3 2 92.285 88.694 2 6.0843E-28 110098 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 147.62 139.7 288180000 0 284860000 3323200 0 0 0 0 0 0 0 0 0 0 0 0 4608 2947 4167 40006;40007;40008;40009;40010 31692;31693;31694 31693 2 ASELPVSEVASILQADLQNGLNK Unmodified 2395.2595 0.25946875 2027 P98194 ATP2C1 Calcium-transporting ATPase type 2C member 1 yes yes 0 0 0 By MS/MS 2 0 1 1 102 97.282 3 0.022789 120252 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 22.323 14.33 14138000 0 14138000 0 0 0 0 0 0 0 0 0 0 0 0 0 4609 2027 4168 40011 31695 31695 1 ASELRIHDLEDDLEMSSDASDASGEEGGRVPK Oxidation (M) 3430.543 0.54304977 1351 P35269 GTF2F1 General transcription factor IIF subunit 1 yes yes 0 1 2 By MS/MS 2 0 1 1 79.203 71.072 4 2.1007E-35 93365 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.498 81.778 19227000 19227000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4610 1351 4169 40012 31696 31696 2052 1 ASELRIHDLEDDLEMSSDASDASGEEGGRVPK Unmodified 3414.5481 0.54813514 1351 P35269 GTF2F1 General transcription factor IIF subunit 1 yes yes 0 0 2 By MS/MS 2 0 1 1 81.632 73.501 5 0.0025732 96331 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 23.726 19.372 9980200 9980200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4611 1351 4169 40013 31697 31697 1 ASENAIVWK Unmodified 1016.5291 0.52909508 3786 Q96CW1 AP2M1 AP-2 complex subunit mu yes yes 0 0 0 By MS/MS 2 0 1 1 52.939 47.147 2 0.0065089 60938 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.44 74.252 135140000 0 135140000 0 0 0 0 0 0 0 0 0 0 0 0 0 4612 3786 4170 40014 31698 31698 1 ASENGHYELEHLSTPK Unmodified 1810.8486 0.84859132 622 O95149 SNUPN Snurportin-1 yes yes 0 0 0 By MS/MS 2 0 1 1 46.915 43.063 3 0.0025586 54454 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 78.326 71.597 12810000 0 0 12810000 0 0 0 0 0 0 0 0 0 0 0 0 4613 622 4171 40015 31699 31699 0 ASENPVLQNIQADPTIVCTSFK Unmodified 2431.2053 0.20532469 3762 Q96BP3 PPWD1 Peptidylprolyl isomerase domain and WD repeat-containing protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 89.707 85.653 3 0.013683 106406 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 33.579 18.965 80483000 0 80483000 0 0 0 0 0 0 0 0 0 0 0 0 0 4614 3762 4172 40016;40017 31700 31700 0 ASEPLLSPPPFGESRK Unmodified 1710.8941 0.89408495 202 O14686 KMT2D Histone-lysine N-methyltransferase 2D yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 71.318 71.047 3 0.0062854 88246 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 38.093 28.96 40425000 0 0 3411500 2601400 1996400 5157400 3471200 3877400 2402200 0 0 0 4747400 4859300 7900500 4615 202 4173 40018;40019;40020;40021;40022;40023;40024;40025;40026;40027 31701;31702;31703;31704 31703 3 ASEQMDGDNTTHPK Unmodified 1529.6416 0.64163501 4968 Q9UKJ3 GPATCH8 G patch domain-containing protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 8.2711 8.3968 3 0.0043311 6893 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 43.184 38.715 57447000 0 0 0 2865000 3195400 2442700 2224300 3039400 3811900 3827700 10764000 7882300 6800900 4158000 6435100 4616 4968 4174 40028;40029;40030;40031;40032;40033;40034;40035;40036;40037;40038;40039 31705;31706;31707;31708;31709 31709 5 ASERWQPDTEEEYEDSSGNVVNK Unmodified 2668.1525 0.15249707 2202 Q12874 SF3A3 Splicing factor 3A subunit 3 yes yes 0 0 1 By MS/MS By matching By MS/MS 2 0 3 1 1 1 56.699 50.724 3 6.364E-38 68224 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 117.35 116.48 53169000 30863000 10694000 11613000 0 0 0 0 0 0 0 0 0 0 0 0 4617 2202 4175 40040;40041;40042 31710;31711;31712 31711 3 ASERWQPDTEEEYEDSSGNVVNKK Unmodified 2796.2475 0.24746009 2202 Q12874 SF3A3 Splicing factor 3A subunit 3 yes yes 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 52.676 46.661 4 2.4796E-19 63523 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.352 87.636 79179000 39095000 0 40084000 0 0 0 0 0 0 0 0 0 0 0 0 4618 2202 4176 40043;40044 31713;31714;31715;31716;31717 31713 5 ASESISLK Unmodified 833.44945 0.44944778 3573 Q8WWI1 LMO7 LIM domain only protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.071 28.265 2 0.013039 30267 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 73.26 36.166 315400000 0 0 0 18973000 17370000 21916000 20888000 20800000 13616000 25813000 36162000 45862000 27624000 28544000 37833000 4619 3573 4177 40045;40046;40047;40048;40049;40050;40051;40052;40053;40054;40055;40056 31718;31719;31720;31721;31722;31723;31724 31722 7 ASESPARGPSGSPR Unmodified 1354.6589 0.65894006 306 O43237 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 8.6384 8.7962 3 1.0491E-11 5884 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 100.19 70.846 91138000 0 0 0 0 3695400 4338900 7890300 3408900 4165400 6620900 23128000 14193000 7073800 6037900 10584000 4620 306 4178 40057;40058;40059;40060;40061;40062;40063;40064;40065;40066;40067 31725;31726;31727;31728;31729;31730;31731 31728 5 ASESSKPWPDATYGTGSASR Unmodified 2053.9341 0.93411186 5122 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 2 1 1 1 1 1 1 1 1 1 1 44.357 44.627 3 5.8812E-37 50112 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 105.95 102.45 199140000 0 0 0 0 13072000 0 12141000 19738000 0 19950000 27951000 30033000 30141000 19910000 26206000 4621 5122 4179 40068;40069;40070;40071;40072;40073;40074;40075;40076;40077;40078;40079 31732;31733;31734;31735;31736;31737;31738;31739;31740;31741;31742;31743 31739 12 ASETGSDEAIK Unmodified 1106.5091 0.5091475 1406 P39880 CUX1 Homeobox protein cut-like 1 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 11.516 11.663 2 0.00035912 9798 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 97.965 71.551 52843000 0 0 0 2962500 2519100 3524700 3168900 3768300 3426300 5234400 3858900 9343300 4635400 3422000 6979500 4622 1406 4180 40080;40081;40082;40083;40084;40085;40086;40087;40088;40089;40090;40091 31744;31745;31746;31747 31744 4 ASETPPPVAQPKPEAPHPGLETTLQER Unmodified 2876.4668 0.46683576 2921 Q6P1N0 CC2D1A Coiled-coil and C2 domain-containing protein 1A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.221 61.322 4 1.7421E-22 69955 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 71.418 68.911 165420000 0 0 0 8696300 7325700 11434000 11846000 13173000 9609900 18913000 18854000 18268000 9715900 14555000 23033000 4623 2921 4181 40092;40093;40094;40095;40096;40097;40098;40099;40100;40101;40102;40103 31748;31749;31750;31751;31752;31753;31754;31755;31756;31757;31758;31759;31760 31758 13 ASETSAFSRPVLSHQK Unmodified 1743.8904 0.89039656 3745 Q96AY4 TTC28 Tetratricopeptide repeat protein 28 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 36.692 36.889 3 0.0078952 39332 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.029 23.402 69563000 0 0 0 4466800 3439200 0 5157700 5915800 4300600 6939600 4732300 10969000 7835100 3748700 12058000 4624 3745 4182 40104;40105;40106;40107;40108;40109;40110;40111;40112;40113;40114 31761;31762;31763;31764;31765 31762 5 ASETVSEASPGSTASQTGVPTQVVQQVQGTQQR Unmodified 3342.6288 0.62876873 1142 P22670 RFX1 MHC class II regulatory factor RFX1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.678 71.744 3 3.6877E-58 82095 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.299 84.925 117200000 0 0 0 4553700 7346400 13409000 8880600 6488500 7620200 12376000 11137000 11304000 9805600 13017000 11259000 4625 1142 4183 40115;40116;40117;40118;40119;40120;40121;40122;40123;40124;40125;40126 31766;31767;31768;31769;31770;31771;31772;31773;31774;31775;31776;31777 31769 12 ASEVEEILDGNDEK Unmodified 1546.6999 0.6998614 2194 Q12824 SMARCB1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 4 2 12 1 4 1 1 1 1 1 1 1 1 1 1 1 1 1 69.224 67.51 2;3 1.2041E-116 85329 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 227.37 208.39 677940000 32623000 500390000 2228300 11632000 7879100 10508000 7961100 8568300 7838100 14004000 12902000 17158000 12268000 9232300 22753000 4626 2194 4184 40127;40128;40129;40130;40131;40132;40133;40134;40135;40136;40137;40138;40139;40140;40141;40142;40143;40144 31778;31779;31780;31781;31782;31783;31784;31785;31786;31787;31788;31789;31790;31791;31792;31793;31794;31795;31796;31797 31781 19 ASEVFCWGQNK Unmodified 1324.587 0.58702067 2725 Q5GLZ8 HERC4 Probable E3 ubiquitin-protein ligase HERC4 yes yes 0 0 0 By MS/MS 3 0 1 1 65.821 61.114 2 0.028075 74830 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 53.968 48.621 4270100 0 4270100 0 0 0 0 0 0 0 0 0 0 0 0 0 4627 2725 4185 40145 31798 31798 1 ASEVFLQR Unmodified 948.50288 0.50288033 4319 Q9H0A0 NAT10 N-acetyltransferase 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 42.341 42.509 2 0.037039 47872 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 90.777 55.952 51757000 0 0 0 2925000 2246700 2318600 7167800 9184800 5380300 3127800 4423600 4844600 4962100 0 5175500 4628 4319 4186 40146;40147;40148;40149;40150;40151;40152;40153;40154;40155;40156 31799 31799 0 ASEVMGPVEAAPEYR Unmodified 1604.7505 0.75045718 3579 Q8WWY3 PRPF31 U4/U6 small nuclear ribonucleoprotein Prp31 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.105 60.21 2 1.9571E-49 68662 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 168.3 158.41 263430000 0 0 0 13444000 14708000 15869000 17816000 15531000 13790000 26315000 27850000 26176000 21691000 25924000 44317000 4629 3579 4187 40157;40158;40159;40160;40161;40162;40163;40164;40165;40166;40167;40168 31800;31801;31802;31803;31804;31805;31806;31807;31808;31809;31810;31811;31812;31813;31814 31801 15 ASEVMGPVEAAPEYR Oxidation (M) 1620.7454 0.7453718 3579 Q8WWY3 PRPF31 U4/U6 small nuclear ribonucleoprotein Prp31 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.628 48.786 2 3.1755E-50 54128 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 170.62 155.93 301880000 0 0 0 21082000 19005000 23063000 21979000 17711000 16157000 27042000 30188000 49908000 27666000 18164000 29915000 4630 3579 4187 40169;40170;40171;40172;40173;40174;40175;40176;40177;40178;40179;40180 31815;31816;31817;31818;31819;31820;31821;31822;31823;31824 31820 5072 10 ASEVQEFTAEFLEK Unmodified 1626.7777 0.77771779 3427 Q8NEM2 SHCBP1 SHC SH2 domain-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 2 3 1 92.624 87.613 2;3 0.00030295 110285 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.063 79.917 71297000 21639000 48361000 1297400 0 0 0 0 0 0 0 0 0 0 0 0 4631 3427 4188 40181;40182;40183;40184;40185;40186 31825;31826;31827;31828;31829;31830 31825 6 ASEWVQQVSGLMDGK Oxidation (M) 1649.7719 0.7719209 1578 P49588 AARS Alanine--tRNA ligase, cytoplasmic yes yes 0 1 0 By MS/MS By MS/MS 2.25 0.433 3 1 3 1 74.998 70.871 2 1.838E-166 88037 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 240.8 215.41 504970000 0 502710000 2262600 0 0 0 0 0 0 0 0 0 0 0 0 4632 1578 4189 40187;40188;40189;40190 31831;31832;31833;31834;31835 31831 2530 5 ASEWVQQVSGLMDGK Unmodified 1633.777 0.77700628 1578 P49588 AARS Alanine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 6 2 1 5 2 87.097 82.85 2;3 3.3564E-187 105130 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 250.26 224.22 862180000 12967000 842920000 6292200 0 0 0 0 0 0 0 0 0 0 0 0 4633 1578 4189 40191;40192;40193;40194;40195;40196;40197;40198 31836;31837;31838;31839;31840;31841;31842 31837 6 ASEYRASEIDQVVPAAQSSPINCEK Unmodified 2748.3025 0.30247255 584 O94782 USP1 Ubiquitin carboxyl-terminal hydrolase 1 yes yes 0 0 1 By MS/MS 2 0 1 1 72.585 69.5 3 0.0035876 85130 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 31.6 23.978 3038900 0 0 3038900 0 0 0 0 0 0 0 0 0 0 0 0 4634 584 4190 40199 31843 31843 1 ASFAPISFAIK Unmodified 1150.6386 0.63864553 2200 Q12872 SFSWAP Splicing factor, suppressor of white-apricot homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 84.785 84.893 2 0.0089495 98493 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.518 50.931 47247000 0 0 0 0 3532300 5517700 4845200 3891200 4593400 4681800 5172600 6579600 0 0 8433400 4635 2200 4191 40200;40201;40202;40203;40204;40205;40206;40207;40208 31844;31845;31846;31847;31848;31849 31849 6 ASFATPYGYAMETAK Oxidation (M) 1622.7287 0.72865911 678 O95671 ASMTL N-acetylserotonin O-methyltransferase-like protein yes yes 0 1 0 By MS/MS 2.67 0.471 1 2 3 66.084 60.967 2 0.00060856 77602 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.92 74.353 132320000 0 132320000 0 0 0 0 0 0 0 0 0 0 0 0 0 4636 678 4192 40209;40210;40211 31850;31851;31852 31850 820 3 ASFATPYGYAMETAK Unmodified 1606.7337 0.73374448 678 O95671 ASMTL N-acetylserotonin O-methyltransferase-like protein yes yes 0 0 0 By MS/MS 2 0 1 1 78.032 73.256 2 6.6118E-38 91250 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.53 116.23 658280000 0 658280000 0 0 0 0 0 0 0 0 0 0 0 0 0 4637 678 4192 40212 31853 31853 1 ASFDHSPDSLPLR Unmodified 1440.6997 0.69974224 3387 Q8NB78 KDM1B Lysine-specific histone demethylase 1B yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 56.781 56.932 3 0.024013 64866 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 32.659 20.715 139070000 0 0 0 0 6302000 17761000 7582200 14066000 9041500 15444000 16939000 23416000 14434000 14084000 0 4638 3387 4193 40213;40214;40215;40216;40217;40218;40219;40220;40221;40222 31854;31855;31856 31854 3 ASFENNCEIGCFAK Unmodified 1645.6865 0.68647672 1785 P56537 EIF6 Eukaryotic translation initiation factor 6 yes yes 0 0 0 By MS/MS By MS/MS 5 3.56 1 1 1 2 1 65.616 61.844 2 0.0016486 75488 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 69.979 65.681 48962000 0 44020000 0 4941900 0 0 0 0 0 0 0 0 0 0 0 4639 1785 4194 40223;40224;40225 31857;31858;31859;31860 31858 4 ASFNHFDK Unmodified 964.44028 0.44028008 356 O43707 ACTN4 Alpha-actinin-4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22.519 22.079 2 0.006623 22280 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 99.305 60.086 378770000 23905000 0 13518000 12339000 6168700 23273000 12498000 7016000 8055700 19978000 50867000 60497000 13248000 25030000 102380000 4640 356 4195 40226;40227;40228;40229;40230;40231;40232;40233;40234;40235;40236;40237;40238;40239 31861;31862;31863;31864;31865;31866;31867;31868 31865 7 ASFNNPDR Unmodified 919.41479 0.41479361 1746 P54727 RAD23B UV excision repair protein RAD23 homolog B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.713 14.855 2 0.034701 13509 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 97.093 60.118 204700000 0 0 0 8419400 5839100 8993100 10662000 7973900 7236100 14161000 40904000 45483000 17467000 37567000 0 4641 1746 4196 40240;40241;40242;40243;40244;40245;40246;40247;40248;40249;40250;40251 31869;31870;31871;31872;31873 31872 2 ASFPQGPIGGANR Unmodified 1270.6418 0.64183343 524 O75608 LYPLA1 Acyl-protein thioesterase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 50.28 50.385 2 0.0003803 56291 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 80.755 71.049 264810000 0 0 0 28944000 10883000 49818000 19111000 12206000 0 31820000 0 37169000 0 26536000 48320000 4642 524 4197 40252;40253;40254;40255;40256;40257;40258;40259;40260 31874;31875;31876;31877;31878;31879;31880;31881;31882 31880 9 ASFSHDFTYLVSGSEDK Unmodified 1888.8479 0.84792262 2734 Q5JSH3 WDR44 WD repeat-containing protein 44 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 1 3 2 80.863 76.6 2;3 7.8926E-46 96032 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 182.02 165.88 161760000 61000000 82858000 17901000 0 0 0 0 0 0 0 0 0 0 0 0 4643 2734 4198 40261;40262;40263;40264;40265;40266 31883;31884;31885;31886;31887;31888 31884 6 ASFSNLPGLR Unmodified 1060.5665 0.56654322 1994 P81274 GPSM2 G-protein-signaling modulator 2 yes yes 0 0 0 By MS/MS 10 0 1 1 67.698 67.84 2 0.0093306 77696 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 57.96 30.435 6525600 0 0 0 0 0 0 6525600 0 0 0 0 0 0 0 0 4644 1994 4199 40267 31889 31889 1 ASFVDEHTVCGVAK Unmodified 1518.7137 0.71367774 4532 Q9NNW7 TXNRD2 Thioredoxin reductase 2, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 3 1 52.169 47.299 2;3 1.7132E-10 61586 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.34 86.474 65811000 0 57485000 8326300 0 0 0 0 0 0 0 0 0 0 0 0 4645 4532 4200 40268;40269;40270;40271 31890;31891;31892;31893;31894 31890 4 ASFVTEVLAHSGR Acetyl (Protein N-term) 1414.7205 0.72047768 311 O43264 ZW10 Centromere/kinetochore protein zw10 homolog yes yes 1 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 94.476 94.626 2 0.00045625 109894 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.408 54.876 1813300 0 0 0 0 0 0 389880 0 0 0 0 0 0 0 1423500 4646 311 4201 40272;40273;40274 31895;31896;31897 31897 3 ASGADSKGDDLSTAILK Acetyl (Protein N-term) 1689.8421 0.84210896 1755 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 68.331 67.189 2 1.0294E-110 77406 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 193.16 163.22 189050000 8111100 38757000 0 8795000 0 0 7820900 5946000 0 7449500 22516000 30584000 8099100 13729000 37243000 4647 1755 4202 40275;40276;40277;40278;40279;40280;40281;40282;40283;40284;40285 31898;31899;31900;31901;31902;31903;31904;31905;31906;31907;31908 31903 11 ASGAGGAGGQAYSPGQPQGLLGPQAYGQGFGGGQAQDLSK Unmodified 3689.7459 0.74586417 4999 Q9ULL5 PRR12 Proline-rich protein 12 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 80.101 80.106 3 0.00060897 92734 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 19.569 14.613 13997000 0 0 0 0 2617800 2402000 0 0 0 5952600 3024700 0 0 0 0 4648 4999 4203 40286;40287;40288;40289 31909;31910 31909 2 ASGAGGVGGGGGGK Acetyl (Protein N-term) 1029.4839 0.4839358 1600 P49790 NUP153 Nuclear pore complex protein Nup153 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.002 13.14 2 1.2497E-12 12481 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 103.87 45.587 56663000 0 0 0 0 3761900 5906900 5786200 6737000 6152800 0 0 8754000 8834300 0 10730000 4649 1600 4204 40290;40291;40292;40293;40294;40295;40296;40297;40298;40299;40300;40301 31911;31912;31913;31914;31915;31916;31917;31918;31919;31920;31921;31922 31919 12 ASGANYSFHK Unmodified 1080.4989 0.49885759 4940 Q9UJU6 DBNL Drebrin-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.8 3.12 3 1 1 1 2 1 1 21.822 18.802 2 9.3346E-13 26529 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 182.39 145.23 396800000 265030000 68149000 56144000 0 0 0 0 0 0 0 0 0 0 0 7481900 4650 4940 4205 40302;40303;40304;40305;40306 31923;31924;31925;31926;31927;31928;31929;31930 31928 6 ASGAPAGARGGPAK Unmodified 1166.6156 0.61561868 1970 P78316 NOP14 Nucleolar protein 14 yes yes 0 0 1 By MS/MS 2 0 1 1 7.94 4.4249 2 0.013843 7757 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.334 50.094 12592000 12592000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4651 1970 4206 40307 31931 31931 1 ASGCEGEDVVTLLK Unmodified 1476.713 0.71300904 1702 P52789 HK2 Hexokinase-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 74.45 73.738 2 1.9019E-11 92259 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145.01 129.44 336590000 0 248610000 0 0 6159400 0 0 5768200 5476700 0 14003000 12959000 11136000 13318000 19152000 4652 1702 4207 40308;40309;40310;40311;40312;40313;40314;40315;40316;40317 31932;31933;31934;31935;31936;31937;31938;31939;31940;31941 31932 9 ASGEHSPGSGAAR Acetyl (Protein N-term) 1224.5483 0.54832698 4394 Q9H4A4 RNPEP Aminopeptidase B yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 9.3606 9.5191 2 1.1114E-75 6451 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 205.53 158.45 96824000 0 0 0 2883200 0 2661800 2319100 0 1702900 0 22513000 15339000 4202600 8980300 36221000 4653 4394 4208 40318;40319;40320;40321;40322;40323;40324;40325;40326 31942;31943;31944;31945;31946;31947 31944 6 ASGFEESMK Unmodified 984.42225 0.42224675 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27.325 26.773 2 0.003237 29016 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 90.709 40.077 388490000 7989200 166800000 0 8296700 12614000 21872000 12594000 11849000 12360000 16987000 27559000 22802000 17366000 22245000 27151000 4654 2930 4209 40327;40328;40329;40330;40331;40332;40333;40334;40335;40336;40337;40338;40339;40340 31948;31949;31950;31951;31952;31953;31954;31955;31956;31957;31958 31950 11 ASGFEESMK Oxidation (M) 1000.4172 0.41716137 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 1 0 By MS/MS 2 0 1 1 13.341 10.047 2 0.0065962 13698 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.582 89.111 37167000 0 37167000 0 0 0 0 0 0 0 0 0 0 0 0 0 4655 2930 4209 40341 31959;31960;31961 31961 4550 3 ASGFVFTR Unmodified 883.4552 0.45520186 2411 Q14527 HLTF Helicase-like transcription factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.943 53.086 2 0.0067231 59771 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 98.458 51.795 1183900000 0 0 0 47410000 55175000 111540000 77846000 76822000 100150000 125130000 131160000 124300000 97502000 92812000 144070000 4656 2411 4210 40342;40343;40344;40345;40346;40347;40348;40349;40350;40351;40352;40353 31962;31963;31964;31965;31966;31967;31968;31969;31970;31971;31972;31973;31974;31975;31976;31977;31978;31979 31969 17 ASGGAQSPLR Unmodified 942.48829 0.4882929 2906 Q6NXT1 ANKRD54 Ankyrin repeat domain-containing protein 54 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 15.062 15.16 2 0.00092117 14327 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 113.74 78.916 64232000 0 0 0 0 5506600 9147400 11217000 6400000 0 11362000 20598000 0 0 0 0 4657 2906 4211 40354;40355;40356;40357;40358;40359 31980;31981;31982;31983;31984;31985 31983 4 ASGGSGGVSVPALWSEVNR Acetyl (Protein N-term) 1870.9173 0.91733959 578 O76094 SRP72 Signal recognition particle subunit SRP72 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 90.87 90.971 2 1.6252E-38 105792 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 146.79 141.06 75109000 0 0 0 0 5517900 4503400 0 8101900 4574000 11905000 9014100 8273600 4040500 5380900 13797000 4658 578 4212 40360;40361;40362;40363;40364;40365;40366;40367;40368;40369 31986;31987;31988;31989;31990;31991;31992;31993;31994;31995;31996;31997;31998 31991 13 ASGLGEAGMSAWLR Unmodified 1404.682 0.68198369 276 O15357 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 80.411 80.534 2 0.00036949 92786 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.345 68.57 25908000 0 0 0 0 0 1767700 0 0 1891200 4937200 0 4826300 1961400 2289700 8234200 4659 276 4213 40370;40371;40372;40373;40374;40375;40376 31999;32000 32000 2 ASGNARIGK Acetyl (Protein N-term) 914.49338 0.49337828 1317 P32119 PRDX2 Peroxiredoxin-2 yes yes 1 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 14.256 11.235 2 0.0002113 14015 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 150.17 112.01 801380000 0 794600000 6782400 0 0 0 0 0 0 0 0 0 0 0 0 4660 1317 4214 40377;40378;40379 32001;32002;32003;32004 32004 4 ASGNARIGKPAPDFK Acetyl (Protein N-term) 1569.8263 0.82633974 1317 P32119 PRDX2 Peroxiredoxin-2 yes yes 1 0 2 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 3 1 2 47.613 41.901 2;3 0.00041095 52688 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 63.128 50.25 1284200000 1151200000 51516000 81519000 0 0 0 0 0 0 0 0 0 0 0 0 4661 1317 4215 40380;40381;40382;40383;40384;40385 32005;32006;32007;32008;32009 32008 4 ASGNLGNTLK Unmodified 973.51926 0.51925868 1994 P81274 GPSM2 G-protein-signaling modulator 2 no no 0 0 0 By MS/MS By matching By MS/MS 7.33 3.77 1 2 1 1 1 24.108 22.683 2 0.0030948 29223 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.965 59.174 33203000 0 26573000 0 0 0 3800200 2830200 0 0 0 0 0 0 0 0 4662 1994 4216 40386;40387;40388 32010;32011;32012 32011 3 ASGNYATVISHNPETK Unmodified 1687.8166 0.81656291 1930 P62917 RPL8 60S ribosomal protein L8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.89 2.72 3 1 24 1 2 1 2 2 2 2 2 2 2 2 2 2 2 2 40.633 40.019 2;3 6.948E-11 43964 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 99.344 89.544 1305300000 17631000 40077000 6815000 64835000 68576000 74567000 76351000 79999000 92623000 135120000 141000000 161480000 67886000 118150000 160130000 4663 1930 4217 40389;40390;40391;40392;40393;40394;40395;40396;40397;40398;40399;40400;40401;40402;40403;40404;40405;40406;40407;40408;40409;40410;40411;40412;40413;40414;40415;40416 32013;32014;32015;32016;32017;32018;32019;32020;32021;32022;32023;32024;32025;32026;32027;32028;32029;32030;32031 32028 19 ASGNYATVISHNPETKK Unmodified 1815.9115 0.91152593 1930 P62917 RPL8 60S ribosomal protein L8 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.078 33.263 4 0.00022711 35654 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 50.787 42.078 123560000 0 0 0 10130000 11517000 5091200 8875600 12252000 4030000 8876600 13463000 18775000 7496300 9976600 13076000 4664 1930 4218 40417;40418;40419;40420;40421;40422;40423;40424;40425;40426;40427;40428 32032;32033;32034;32035;32036;32037;32038;32039;32040 32038 9 ASGPGLNTTGVPASLPVEFTIDAK Unmodified 2341.2165 0.2165413 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.31 3.71 8 2 19 1 6 3 1 2 2 2 2 2 2 2 2 1 1 91.632 90.513 2;3 9.2024E-40 112270 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.76 112.31 5151900000 18194000 4925500000 36498000 1006200 5277000 5683700 3504800 5758500 5805600 41149000 39060000 21440000 0 7528400 35565000 4665 1124 4219 40429;40430;40431;40432;40433;40434;40435;40436;40437;40438;40439;40440;40441;40442;40443;40444;40445;40446;40447;40448;40449;40450;40451;40452;40453;40454;40455;40456;40457 32041;32042;32043;32044;32045;32046;32047;32048;32049;32050;32051;32052;32053;32054;32055 32044 14 ASGPPVSELITK Unmodified 1197.6605 0.66050319 1038;920 P10412;P16402;P16403 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 no no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.78 3.6 1 3 1 13 2 2 1 1 1 1 1 1 1 1 1 1 2 1 1 66.868 65.98 2 0.00013503 72075 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 88.155 59.459 4207600000 73544000 2228400000 19166000 115730000 107800000 99097000 109200000 86146000 86173000 155030000 177180000 202170000 334700000 180000000 233290000 4666 920;1038 4220 40458;40459;40460;40461;40462;40463;40464;40465;40466;40467;40468;40469;40470;40471;40472;40473;40474;40475 32056;32057;32058;32059;32060;32061;32062;32063;32064;32065;32066;32067;32068;32069;32070;32071;32072;32073;32074;32075;32076 32069 17 ASGQAFELILSPR Unmodified 1387.746 0.74596415 1043 P16949 STMN1 Stathmin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 83.499 83.645 2 0.030757 96560 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 34.685 20.018 17450000 0 0 0 0 0 0 0 0 0 0 0 5759600 0 3752100 7938200 4667 1043 4221 40476;40477;40478 32077 32077 1 ASGQNLNLR Unmodified 971.51484 0.514842 1146 P22735 TGM1 Protein-glutamine gamma-glutamyltransferase K yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 24.311 24.304 2 0.0012438 25846 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 142.64 86.96 80070000 0 0 0 61026000 0 6773200 0 12270000 0 0 0 0 0 0 0 4668 1146 4222 40479;40480;40481;40482;40483 32078;32079;32080;32081;32082;32083 32083 5 ASGQPAGPDNK Unmodified 1040.4887 0.48868683 778 P04183 TK1 Thymidine kinase, cytosolic yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 6.5838 3.2462 2 0.0011356 5299 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.42 73.134 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4669 778 4223 40484;40485 32084;32085 32084 2 ASGRTPEAVQK Unmodified 1142.6044 0.60438529 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 7.0988 7.2224 2;3 0.00029642 5332 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 107.06 77.312 519560000 0 0 0 21253000 15878000 49646000 33097000 21659000 29357000 48070000 87950000 42140000 19316000 48969000 102220000 4670 1565 4224 40486;40487;40488;40489;40490;40491;40492;40493;40494;40495;40496;40497;40498;40499;40500;40501;40502;40503;40504;40505;40506;40507;40508;40509 32086;32087;32088;32089;32090;32091 32090 4 ASGSGDSVTRR Acetyl (Protein N-term) 1133.5425 0.54251332 3663 Q92797 SYMPK Symplekin yes yes 1 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.12 11.235 2 5.5438E-05 10263 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 124.92 78.496 117280000 0 0 0 5155500 6236900 11609000 9821500 9506100 8571800 12379000 0 11657000 14204000 13011000 15128000 4671 3663 4225 40510;40511;40512;40513;40514;40515;40516;40517;40518;40519;40520 32092;32093;32094;32095;32096;32097;32098;32099;32100;32101 32093 6 ASGSGGGSAALGPSGFGPSGGSGTK Unmodified 2006.9294 0.92936084 1189 P25440 BRD2 Bromodomain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 49.351 48.897 2 1.192E-178 61369 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 210.09 198.88 120620000 0 28863000 0 5944000 5165900 6365900 6961900 0 0 10778000 14743000 11376000 0 10240000 20184000 4672 1189 4226 40521;40522;40523;40524;40525;40526;40527;40528;40529;40530 32102;32103;32104;32105;32106;32107;32108;32109;32110;32111 32105 10 ASGTLPSQPK Unmodified 984.52401 0.52400971 4596 Q9NRA8 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 19.955 20.078 2 0.016439 20728 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 49.536 20.12 33541000 0 0 0 6178700 0 0 0 9207600 7875200 0 0 0 10279000 0 0 4673 4596 4227 40531;40532;40533;40534 32112;32113 32113 2 ASGTLREYK Unmodified 1023.5349 0.53490874 2078 Q02543 RPL18A 60S ribosomal protein L18a yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 15.23 12.021 2 0.0088193 17788 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 158.76 113.08 276950000 266910000 0 10047000 0 0 0 0 0 0 0 0 0 0 0 0 4674 2078 4228 40535;40536 32114;32115;32116 32114 2 ASGTTTTAVK Acetyl (Protein N-term) 977.50294 0.50293991 2237 Q13126 MTAP S-methyl-5'-thioadenosine phosphorylase yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 5.56 3.98 5 4 2 2 1 1 1 1 1 20.076 19.364 2 0.002585 19523 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.09 32.983 97563000 28935000 17173000 2090200 0 0 0 0 2128200 0 0 14082000 10540000 0 0 22614000 4675 2237 4229 40537;40538;40539;40540;40541;40542;40543;40544;40545 32117;32118;32119;32120;32121;32122;32123;32124 32119 7 ASGVAVSDGVIK Acetyl (Protein N-term) 1143.6136 0.61355299 1165 P23528 CFL1 Cofilin-1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.28 4 4 10 3 12 7 7 3 1 1 1 1 1 1 1 1 1 1 1 1 69.554 68.694 2 7.2889E-15 42475 211201_C21_010_OE480_Thermo_Rev00_#21_059_input_rep1 155.15 121.35 11039000000 4412900000 1019000000 97462000 170480000 129560000 186530000 185330000 145090000 123450000 263450000 936590000 723460000 172290000 574810000 1898100000 4676 1165 4230 40546;40547;40548;40549;40550;40551;40552;40553;40554;40555;40556;40557;40558;40559;40560;40561;40562;40563;40564;40565;40566;40567;40568;40569;40570;40571;40572;40573;40574 32125;32126;32127;32128;32129;32130;32131;32132;32133;32134;32135;32136;32137;32138;32139;32140;32141;32142;32143;32144;32145;32146;32147;32148;32149;32150;32151;32152;32153;32154 32125 29 ASGVAVSDGVIK Unmodified 1101.603 0.60298831 1165 P23528 CFL1 Cofilin-1 yes yes 0 0 0 By MS/MS 2 0 1 1 48.208 42.586 2 0.0079879 55489 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.879 59.878 43848000 0 43848000 0 0 0 0 0 0 0 0 0 0 0 0 0 4677 1165 4230 40575 32155 32155 0 ASGVPSGRAK Unmodified 928.50903 0.50902834 4727 Q9NXH9 TRMT1 tRNA (guanine(26)-N(2))-dimethyltransferase yes yes 0 0 1 By MS/MS 2 0 1 1 7.0737 3.6415 2 0.030966 6815 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.67 61.372 115390000 115390000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4678 4727 4231 40576 32156 32156 1 ASGVQAQMAK Unmodified 989.49641 0.49641475 1252 P29558 RBMS1 RNA-binding motif, single-stranded-interacting protein 1 no no 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 15.353 15.078 2 0.0017487 13940 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 102.46 68.822 50261000 0 6164300 0 3701700 5115800 0 4999100 0 3785400 5412200 0 0 7650800 4778700 8652700 4679 1252 4232 40577;40578;40579;40580;40581;40582;40583;40584;40585 32157;32158 32158 2 ASGVQVADEVCR Acetyl (Protein N-term) 1331.614 0.6139637 1822 P60981 DSTN Destrin yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.71 3.15 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65.164 65.698 2 2.9823E-09 66674 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 139.86 120.07 159950000 1132700 1612000 0 6083000 4650500 7534400 4144700 4700200 7811100 8411600 18152000 31375000 10512000 18482000 35347000 4680 1822 4233 40586;40587;40588;40589;40590;40591;40592;40593;40594;40595;40596;40597;40598;40599 32159;32160;32161;32162;32163;32164;32165;32166;32167;32168;32169;32170;32171;32172;32173;32174;32175;32176 32165 18 ASGVQVADEVCRIFYDMK Acetyl (Protein N-term) 2128.9922 0.99216079 1822 P60981 DSTN Destrin yes yes 1 0 1 By MS/MS By MS/MS 2.2 0.4 4 1 4 1 100.23 96.237 2;3 2.8478E-184 119044 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 246.18 210.66 327710000 0 326580000 1131000 0 0 0 0 0 0 0 0 0 0 0 0 4681 1822 4234 40600;40601;40602;40603;40604 32177;32178;32179;32180;32181 32178 5 ASGVTVNDEVIK Acetyl (Protein N-term) 1272.6561 0.65614609 5088 Q9Y281 CFL2 Cofilin-2 yes yes 1 0 0 By MS/MS 1.5 0.5 1 1 2 85.279 83.764 2 0.00010457 88210 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 109.42 41.426 94508000 94508000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4682 5088 4235 40605;40606 32182;32183 32182 2 ASGYQSSQK Unmodified 954.44067 0.44067401 1674 P51858 HDGF Hepatoma-derived growth factor yes yes 0 0 0 By MS/MS 1 0 1 1 106.8 112.07 2 2.2857E-06 92828 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 176.84 116.05 162570000 162570000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4683 1674 4236 40607 32184 32184 1 ASHEEVEGLVEK Unmodified 1325.6463 0.64630969 2157 Q08380 LGALS3BP Galectin-3-binding protein yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 1 2 2 2 2 2 2 1 1 2 1 33.985 34.167 3 0.0011253 37750 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 48.115 32.525 343410000 0 0 0 17625000 13576000 30162000 26592000 30967000 20070000 32076000 48798000 28893000 34240000 26107000 34302000 4684 2157 4237 40608;40609;40610;40611;40612;40613;40614;40615;40616;40617;40618;40619;40620;40621;40622;40623;40624;40625;40626 32185;32186;32187;32188;32189;32190;32191 32186 4 ASHFQSHSSER Unmodified 1271.5643 0.56431139 95 CON__Q5D862;Q5D862 FLG2 Filaggrin-2 yes no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 5.5449 5.6341 3 0.0094 3327 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 62.924 50.71 + 38493000 0 0 0 11832000 0 0 5725000 12722000 3696500 0 0 0 4517600 0 0 4685 95 4238 40627;40628;40629;40630;40631 32192;32193;32194;32195 32192 0 ASHNIGIAMDTEQGLIVPNVK Unmodified 2206.1416 0.14160222 938 P11182 DBT Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 85.929 77.799 3 0.00061479 101452 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.603 32.989 9788600 9788600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4686 938 4239 40632 32196 32196 1 ASHSANSQPSATTVTAITPAPIQQPVK Unmodified 2701.4035 0.40350722 700 O95835 LATS1 Serine/threonine-protein kinase LATS1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.782 66.865 3 1.8913E-21 76785 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 56.72 53.505 84658000 0 0 0 4743000 4488300 6919700 7356200 5278200 6245000 7628000 9625200 9235300 4671000 6858100 11610000 4687 700 4240 40633;40634;40635;40636;40637;40638;40639;40640;40641;40642;40643;40644 32197;32198;32199;32200;32201;32202;32203;32204;32205;32206;32207;32208;32209;32210;32211;32212;32213 32204 17 ASHSTSQLSQK Unmodified 1172.5786 0.57856447 5105 Q9Y2I8 WDR37 WD repeat-containing protein 37 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 6.6268 3.8019 3 0.01341 6643 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 35.496 21.687 107240000 97346000 0 9897300 0 0 0 0 0 0 0 0 0 0 0 0 4688 5105 4241 40645;40646 32214 32214 1 ASIEIANESGETPLDIAK Unmodified 1856.9367 0.93673763 298 O43150 ASAP2 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 80.563 75.851 2 5.586E-106 94451 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 208.95 175.86 48309000 0 48309000 0 0 0 0 0 0 0 0 0 0 0 0 0 4689 298 4242 40647 32215 32215 1 ASIGQSPGLPSTTFK Unmodified 1489.7777 0.77765821 2810 Q5VT52 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 66.398 65.73 2 1.4104E-20 75183 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 145.31 123.94 1226400000 0 56142000 0 52347000 72462000 64174000 87185000 98724000 75492000 90037000 138860000 145520000 116990000 103090000 125420000 4690 2810 4243 40648;40649;40650;40651;40652;40653;40654;40655;40656;40657;40658;40659;40660;40661 32216;32217;32218;32219;32220;32221;32222;32223;32224;32225;32226 32225 10 ASIHEAWTDGK Unmodified 1213.5728 0.57275081 356;971 O43707;P12814 ACTN4;ACTN1 Alpha-actinin-4;Alpha-actinin-1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.59 3.87 14 4 23 5 8 5 2 2 2 2 2 1 2 2 2 2 2 2 33.646 31.631 2;3 1.0646E-46 40572 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 223.36 162.54 5803700000 1434100000 1528300000 1699800000 36806000 18947000 73108000 42412000 43931000 31277000 81960000 173520000 181110000 58146000 95409000 304750000 4691 356;971 4244 40662;40663;40664;40665;40666;40667;40668;40669;40670;40671;40672;40673;40674;40675;40676;40677;40678;40679;40680;40681;40682;40683;40684;40685;40686;40687;40688;40689;40690;40691;40692;40693;40694;40695;40696;40697;40698;40699;40700;40701;40702 32227;32228;32229;32230;32231;32232;32233;32234;32235;32236;32237;32238;32239;32240;32241;32242;32243;32244;32245;32246;32247;32248;32249;32250;32251;32252;32253;32254;32255;32256 32250 17 ASILDEYENSLSR Acetyl (Protein N-term) 1537.726 0.72601657 4805 Q9P253 VPS18 Vacuolar protein sorting-associated protein 18 homolog yes yes 1 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 92.689 92.817 2 0.0012087 107802 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 52.247 36.981 8647500 0 0 0 0 0 0 1411100 0 0 3686000 0 0 0 3550400 0 4692 4805 4245 40703;40704;40705 32257;32258 32257 2 ASILNTWISLK Unmodified 1244.7129 0.71287311 1135 P22234 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes yes 0 0 0 By MS/MS 10 0 1 1 89.452 89.595 2 0.010524 103660 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.398 39.528 3637600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3637600 4693 1135 4246 40706 32259 32259 1 ASIMEGPLSK Acetyl (Protein N-term);Oxidation (M) 1089.5376 0.53761086 3995 Q96SU4 OSBPL9 Oxysterol-binding protein-related protein 9 yes yes 1 1 0 By MS/MS 1 0 1 1 103.52 104.41 2 0.0079566 95838 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 63.076 40.033 8976600 0 8976600 0 0 0 0 0 0 0 0 0 0 0 0 0 4694 3995 4247 40707 32260 32260 5477 1 ASINMLR Unmodified 803.43236 0.43235793 1072 P18124 RPL7 60S ribosomal protein L7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 41.11 41.667 2 0.02459 46005 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 97.596 25.647 136510000 0 0 0 0 0 0 0 0 0 0 34583000 29922000 0 30157000 41851000 4695 1072 4248 40708;40709;40710;40711 32261 32261 1 ASINPVTGRVEEKPPNPMEGMTEEQK Unmodified 2867.3793 0.37934266 4556 Q9NPQ8 RIC8A Synembryn-A yes yes 0 0 2 By MS/MS 2 0 1 1 70.621 67.046 4 0.0039055 82659 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 30.337 21.604 15499000 0 0 15499000 0 0 0 0 0 0 0 0 0 0 0 0 4696 4556 4249 40712 32262 32262 0 ASIPATSAVQNVLINPSLIGSK Unmodified 2179.2212 0.22123275 2616 Q16594 TAF9 Transcription initiation factor TFIID subunit 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.64 2.9 1 1 9 2 1 1 1 1 1 1 1 1 1 90.771 90.126 3 0.015202 104281 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 23.509 14.689 40692000 0 8454300 0 0 1787000 1500400 1593100 2547800 2103800 6229300 3898600 4499300 0 0 8078500 4697 2616 4250 40713;40714;40715;40716;40717;40718;40719;40720;40721;40722;40723 32263;32264;32265;32266;32267 32266 5 ASIPFSVVGSNQLIEAK Unmodified 1758.9516 0.95159983 2474 Q15019 SEPT2 Septin-2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 86.434 85.317 2 0.00075387 106246 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.15 101.47 603130000 13008000 191300000 1073700 7312900 20935000 26825000 18448000 23738000 20620000 47762000 75603000 53239000 23126000 23590000 56549000 4698 2474 4251 40724;40725;40726;40727;40728;40729;40730;40731;40732;40733;40734;40735;40736;40737;40738;40739 32268;32269;32270;32271;32272 32269 5 ASISVHSPQK Unmodified 1052.5615 0.56145784 342 O43572 AKAP10 A-kinase anchor protein 10, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 22.23 18.341 2 0.0054424 26054 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.676 58.546 31162000 26040000 0 5122300 0 0 0 0 0 0 0 0 0 0 0 0 4699 342 4252 40740;40741 32273 32273 1 ASITALEAK Unmodified 902.5073 0.50729701 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 40.627 39.23 2 0.0029087 44484 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 124.98 48.506 10033000000 72880000 3533000000 55436000 447970000 552880000 478610000 452320000 450760000 380610000 689790000 665110000 864830000 429550000 397320000 561710000 4700 1356 4253 40742;40743;40744;40745;40746;40747;40748;40749;40750;40751;40752;40753;40754;40755;40756;40757;40758 32274;32275;32276;32277;32278;32279;32280;32281;32282;32283;32284;32285;32286;32287;32288;32289;32290;32291;32292;32293;32294;32295;32296;32297;32298;32299 32296 25 ASIWVGHR Acetyl (Protein N-term) 966.50355 0.50354903 968 P12429 ANXA3 Annexin A3 yes yes 1 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 59.726 60.1 2 0.0074019 67858 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 60.76 49.111 43113000 0 0 0 0 0 0 0 0 0 0 7710000 5840300 2123800 5539300 21899000 4701 968 4254 40759;40760;40761;40762;40763 32300;32301;32302 32302 3 ASKPGEPSWPCPWGK Unmodified 1682.7875 0.78751139 1579 P49589 CARS Cysteine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS 2 0 1 1 76.696 68.565 3 0.03653 90487 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 21.42 7.7036 12098000 12098000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4702 1579 4255 40764 32303 32303 1 ASLACGPMVK Unmodified 1032.5096 0.50962197 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 39.792 39.984 2 0.011171 44412 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 54.712 38.568 64354000 0 0 0 3726900 4762500 0 3966100 4091900 5120800 4870100 4932700 11398000 7583400 4850400 9052000 4703 2392 4256 40765;40766;40767;40768;40769;40770;40771;40772;40773;40774;40775 32304;32305;32306;32307;32308;32309 32308 6 ASLAETDK Unmodified 833.41306 0.41306227 1398 P38606 ATP6V1A V-type proton ATPase catalytic subunit A yes yes 0 0 0 By MS/MS By MS/MS By matching 2.25 0.433 3 1 1 2 1 9.832 7.2382 2 0.0024997 12037 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 122.74 86.698 198420000 29839000 168510000 76144 0 0 0 0 0 0 0 0 0 0 0 0 4704 1398 4257 40776;40777;40778;40779 32310;32311;32312;32313 32313 4 ASLASLPPLHVAK Unmodified 1302.766 0.76597131 2391 Q14203 DCTN1 Dynactin subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 3 24 2 1 2 2 2 2 2 2 2 2 2 2 2 2 71.125 70.414 2;3 0.0023777 91919 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.14 48.737 383590000 96720000 51176000 0 10047000 10551000 25053000 17110000 14128000 9702300 20574000 21045000 30605000 19248000 20598000 37031000 4705 2391 4258 40780;40781;40782;40783;40784;40785;40786;40787;40788;40789;40790;40791;40792;40793;40794;40795;40796;40797;40798;40799;40800;40801;40802;40803;40804;40805;40806 32314;32315;32316;32317;32318;32319;32320;32321;32322;32323;32324;32325;32326 32320 7 ASLCISTK Unmodified 878.45315 0.45315295 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 0 0 By MS/MS By matching By matching By matching 10 0 4 1 1 1 1 31.256 31.769 2 0.035464 34593 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 52.482 18.931 85863000 0 0 0 0 0 0 0 0 0 13680000 22637000 24408000 0 0 25138000 4706 894 4259 40807;40808;40809;40810 32327 32327 1 ASLDSAGGSGSSPILLPTPVVGGPR Unmodified 2291.2121 0.21212463 4131 Q9BST9 RTKN Rhotekin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 2 1 1 2 1 2 2 86.1 86.189 2;3 0.00013524 100127 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 36.638 32.008 42298000 0 0 0 0 2547000 3780400 0 4087600 0 4777500 0 7030800 2512100 6093800 11469000 4707 4131 4260 40811;40812;40813;40814;40815;40816;40817;40818;40819;40820;40821;40822 32328;32329;32330;32331;32332;32333;32334 32334 7 ASLDTSELER Unmodified 1119.5408 0.54078198 566 O75962 TRIO Triple functional domain protein yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 2 42.294 42.52 2 0.0079758 46453 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.161 25.723 45651000 0 0 0 2790200 2238300 3818700 4060000 3296100 2524400 0 4760400 6417700 4631300 3294600 7819200 4708 566 4261 40823;40824;40825;40826;40827;40828;40829;40830;40831;40832;40833;40834 32335;32336;32337;32338;32339;32340;32341;32342;32343;32344 32337 10 ASLEAAIADAEQR Unmodified 1343.6681 0.66810776 67;51 CON__H-INV:HIT000292931;CON__P05787;P05787 KRT8 Keratin, type II cytoskeletal 8 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 70.262 70.337 2;3 1.2413E-13 80745 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 141.93 112.46 + 967970000 0 0 0 37374000 52458000 71866000 56894000 59563000 42901000 86458000 77548000 174490000 85182000 87899000 135330000 4709 51;67 4262 40835;40836;40837;40838;40839;40840;40841;40842;40843;40844;40845;40846;40847;40848;40849;40850;40851;40852;40853;40854;40855;40856;40857;40858 32345;32346;32347;32348;32349;32350;32351;32352;32353;32354;32355;32356;32357;32358;32359;32360;32361;32362;32363;32364;32365;32366 32347 12 ASLEAAIADAEQRGELAIK Unmodified 1955.0324 0.032369346 67;51 CON__H-INV:HIT000292931;CON__P05787;P05787 KRT8 Keratin, type II cytoskeletal 8 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 2 2 2 85.693 85.187 2;3 7.7437E-108 98273 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 167.98 137.65 + 198230000 0 33466000 1545800 4528800 3963800 4775900 0 5489000 5368500 37428000 16943000 0 0 0 84718000 4710 51;67 4263 40859;40860;40861;40862;40863;40864;40865;40866;40867;40868;40869;40870;40871 32367;32368;32369;32370;32371;32372;32373;32374;32375;32376;32377;32378;32379 32371 13 ASLEAHRDAPGAGAPPAPGK Unmodified 1868.9493 0.94930842 469 O75170 PPP6R2 Serine/threonine-protein phosphatase 6 regulatory subunit 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS 5.43 3.96 4 3 2 2 1 1 1 31.022 28.352 3;4 2.5379E-08 40252 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.293 73.282 100100000 76036000 0 16518000 0 0 3412200 0 0 0 1816900 0 0 0 2321400 0 4711 469 4264 40872;40873;40874;40875;40876;40877;40878 32380;32381;32382;32383;32384 32381 4 ASLEGNLAETENR Unmodified 1402.6688 0.66883604 84 CON__Q04695;Q04695 KRT17 Keratin, type I cytoskeletal 17 yes no 0 0 0 By MS/MS By MS/MS 10 0 3 2 1 42.099 41.862 2;3 4.5755E-20 46582 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 156.58 133.26 + 187270000 0 0 0 94856000 0 0 0 0 0 0 0 0 92413000 0 0 4712 84 4265 40879;40880;40881 32385;32386 32385 2 ASLENSLEETK Unmodified 1219.5932 0.59321148 56;70 CON__P02533;P02533;CON__P08779;P08779;CON__Q9Z2K1;CON__Q3ZAW8 KRT14;KRT16 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 41.728 40.942 2 2.4107E-15 45587 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 196.37 167.97 + 11768000000 0 383000000 1745000 2588700000 452050000 866690000 642900000 1346400000 344330000 769740000 756770000 837950000 2012200000 389470000 375730000 4713 56;70 4266 40882;40883;40884;40885;40886;40887;40888;40889;40890;40891;40892;40893;40894;40895;40896 32387;32388;32389;32390;32391;32392;32393;32394;32395;32396;32397;32398;32399;32400;32401;32402;32403;32404;32405;32406;32407;32408;32409 32389 23 ASLENSLR Unmodified 888.46649 0.46649483 814 P05783;CON__H-INV:HIT000015463 KRT18 Keratin, type I cytoskeletal 18 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 30.206 30.443 2 0.00070974 33036 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 150.84 53.039 3476000000 0 0 0 0 262550000 275350000 242820000 302420000 172940000 323040000 339990000 457230000 357440000 319140000 423120000 4714 814 4267 40897;40898;40899;40900;40901;40902;40903;40904;40905;40906;40907 32410;32411;32412;32413;32414;32415;32416;32417;32418;32419;32420;32421;32422 32411 11 ASLENSLREVEAR Unmodified 1472.7583 0.75831975 814 P05783 KRT18 Keratin, type I cytoskeletal 18 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 2 2 2 1 2 2 1 2 2 1 57.013 57.086 2;3 1.2588E-13 64756 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 124.12 104.36 3983800000 0 0 0 141760000 207810000 355940000 349540000 443250000 189090000 374820000 379870000 457090000 304720000 321770000 458140000 4715 814 4268 40908;40909;40910;40911;40912;40913;40914;40915;40916;40917;40918;40919;40920;40921;40922;40923;40924;40925;40926;40927;40928 32423;32424;32425;32426;32427;32428;32429;32430;32431;32432;32433;32434;32435;32436;32437;32438;32439;32440;32441;32442 32423 19 ASLENVHPPIAPPPTEIPER Unmodified 2163.1324 0.13241774 3033 Q75N03 CBLL1 E3 ubiquitin-protein ligase Hakai yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.976 76.036 3 0.0009453 86961 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 41.521 37.253 91690000 0 0 0 3935400 6950400 7667500 7012800 5084000 5004100 9607900 8596000 9753400 4983700 8083700 15012000 4716 3033 4269 40929;40930;40931;40932;40933;40934;40935;40936;40937;40938;40939;40940 32443;32444;32445;32446;32447;32448;32449 32446 7 ASLGLADHRELGK Unmodified 1365.7365 0.7364621 5094 Q9Y2A7 NCKAP1 Nck-associated protein 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36.787 36.085 3 0.002642 39426 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 51.463 44.765 189370000 72136000 20707000 0 4209400 2069500 10099000 4097200 5902100 4722200 6617900 6970000 10268000 8320500 7842400 25412000 4717 5094 4270 40941;40942;40943;40944;40945;40946;40947;40948;40949;40950;40951;40952;40953;40954 32450;32451;32452;32453;32454;32455;32456;32457;32458 32453 8 ASLGSLEGEAEAEASSPK Unmodified 1731.8163 0.81628814 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 68.462 67.808 2;3 3.3822E-38 77857 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 132.97 107.73 237640000 0 28450000 0 0 12320000 16321000 16072000 19750000 16816000 21514000 16774000 24479000 19367000 18005000 27776000 4718 2172 4271 40955;40956;40957;40958;40959;40960;40961;40962;40963;40964;40965;40966;40967;40968 32459;32460;32461;32462;32463;32464;32465;32466;32467;32468;32469;32470;32471 32469 12 ASLIEVDLSDLK Unmodified 1301.7078 0.70784731 2778 Q5T5Y3 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 85.909 86.046 2 0.019997 99795 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 40.715 25.053 5442300 0 0 0 0 0 0 0 0 0 2290600 0 0 0 0 3151700 4719 2778 4272 40969;40970 32472 32472 1 ASLIEYIK Unmodified 935.53278 0.53278348 998 P14384 CPM Carboxypeptidase M yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 72.239 72.361 2 0.021412 83235 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 61.999 17.552 53143000 0 0 0 15051000 0 0 4194100 0 3567900 4522100 5782900 4678800 4561200 5177100 5608300 4720 998 4273 40971;40972;40973;40974;40975;40976;40977;40978;40979 32473;32474;32475 32474 3 ASLISAVSDK Unmodified 989.53933 0.53932542 4063 Q99816 TSG101 Tumor susceptibility gene 101 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.689 49.82 2 0.00090024 56189 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 116.3 71.955 313890000 0 0 0 21160000 21747000 20624000 22765000 24675000 18583000 30579000 0 37718000 30034000 29600000 56409000 4721 4063 4274 40980;40981;40982;40983;40984;40985;40986;40987;40988;40989;40990;40991 32476;32477;32478;32479;32480;32481;32482;32483;32484;32485;32486;32487;32488 32477 13 ASLLASQALHR Unmodified 1165.6568 0.65675521 4211 Q9BWH6 RPAP1 RNA polymerase II-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 46.025 46.178 3 0.0049726 50552 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.08 42.772 62341000 0 0 0 5294400 2699600 0 6154900 5196900 4681600 6339900 0 7462400 7010700 8846100 8654000 4722 4211 4275 40992;40993;40994;40995;40996;40997;40998;40999;41000;41001 32489;32490;32491;32492 32491 4 ASLLDPVPEVR Unmodified 1194.6608 0.66083754 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 76.069 75.402 2 0.00029757 86842 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 90.108 74.957 1043800000 0 159060000 6550200 48084000 54867000 95259000 58591000 59280000 64042000 80301000 75170000 110810000 57799000 74580000 99434000 4723 3641 4276 41002;41003;41004;41005;41006;41007;41008;41009;41010;41011;41012;41013;41014;41015;41016 32493;32494;32495;32496;32497;32498;32499;32500;32501;32502;32503;32504;32505 32503 13 ASLLDPVPEVRTVSAK Unmodified 1680.941 0.94103514 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 78.83 74.092 3 0.00022495 94937 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.507 52.739 461160000 77197000 219710000 164260000 0 0 0 0 0 0 0 0 0 0 0 0 4724 3641 4277 41017;41018;41019;41020 32506;32507;32508;32509;32510;32511 32510 6 ASLLHSMPTHSSPR Unmodified 1519.7565 0.75654561 456 O75122 CLASP2 CLIP-associating protein 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.971 36.151 3 0.01252 38866 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 28.58 15.954 64573000 0 0 0 2056900 3038400 5675300 4725600 6466400 4663200 4832400 4450500 12098000 5916600 4137800 6511900 4725 456 4278 41021;41022;41023;41024;41025;41026;41027;41028;41029;41030;41031;41032 32512;32513;32514;32515 32515 4 ASLLHSMPTHSSPR Oxidation (M) 1535.7515 0.75146023 456 O75122 CLASP2 CLIP-associating protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 20.832 21.006 4 0.0017445 20747 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 44.925 23.167 62506000 0 0 0 7424600 0 4071300 5923500 4866100 4803500 4474400 0 24104000 4128400 2710200 0 4726 456 4278 41033;41034;41035;41036;41037;41038;41039;41040;41041 32516 32516 583 1 ASLLPQSLAAAAAVPTR Unmodified 1635.9308 0.93080481 2197 Q12849 GRSF1 G-rich sequence factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 84.504 84.682 2 1.0029E-07 98158 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 78.763 72.791 10250000 0 0 0 0 0 0 2529500 0 0 0 0 0 0 0 7720300 4727 2197 4279 41042;41043;41044;41045 32517;32518;32519;32520 32520 4 ASLLQNESTNEQLQIHYK Unmodified 2115.0596 0.059646729 4137 Q9BT78 COPS4 COP9 signalosome complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 66.476 66.732 3 6.3382E-11 75767 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.362 76.539 56579000 0 0 0 0 0 9498900 0 0 4706000 8842800 7235100 8012700 0 0 18284000 4728 4137 4280 41046;41047;41048;41049;41050;41051 32521;32522;32523;32524;32525;32526 32524 6 ASLLQSDR Unmodified 888.46649 0.46649483 4942 Q9UJW0 DCTN4 Dynactin subunit 4 yes yes 0 0 0 By MS/MS 10 0 1 1 30.728 30.415 2 0.022194 33181 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 61.357 4.6364 243340000 0 0 0 243340000 0 0 0 0 0 0 0 0 0 0 0 4729 4942 4281 41052 32527 32527 1 ASLMNDDFEK Oxidation (M) 1184.502 0.50195363 5030 Q9UNF0 PACSIN2 Protein kinase C and casein kinase substrate in neurons protein 2 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 36.373 31.63 2 0.013491 41950 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.335 53.669 119520000 0 119520000 0 0 0 0 0 0 0 0 0 0 0 0 0 4730 5030 4282 41053;41054 32528;32529 32529 6373 2 ASLMNDDFEK Unmodified 1168.507 0.50703901 5030 Q9UNF0 PACSIN2 Protein kinase C and casein kinase substrate in neurons protein 2 yes yes 0 0 0 By MS/MS 10 0 1 1 49.25 49.961 2 0.012537 55474 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.276 45.121 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4731 5030 4282 41055 32530 32530 1 ASLNGADIYSGCCTLK Unmodified 1728.7811 0.78110538 1008 P14866 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes yes 0 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 1 3 67.286 60.98 2 3.0908E-38 78049 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 162.32 146.18 310310000 6841200 303470000 0 0 0 0 0 0 0 0 0 0 0 0 0 4732 1008 4283 41056;41057;41058;41059 32531;32532;32533;32534;32535 32531 5 ASLNWHMK Unmodified 985.48037 0.48037075 3898 Q96JP5;Q96CK0 ZFP91;ZNF653 E3 ubiquitin-protein ligase ZFP91;Zinc finger protein 653 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 42.117 42.181 2 0.032055 47175 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 54.549 38.917 60573000 0 0 0 5865100 3432500 0 0 6917400 6231900 10293000 8738400 0 10810000 8285800 0 4733 3898 4284 41060;41061;41062;41063;41064;41065;41066;41067 32536;32537;32538 32537 3 ASLPSIQEELR Unmodified 1241.6616 0.66156582 2675 Q3T8J9 GON4L GON-4-like protein no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 71.352 71.4 2 0.020343 81284 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 42.743 29.05 19413000 0 0 0 0 3320900 0 2433600 2833700 0 3842000 0 0 3645700 3337400 0 4734 2675 4285 41068;41069;41070;41071;41072;41073 32539;32540;32541 32540 3 ASLPSSEVAKPSEK Unmodified 1428.746 0.74602373 4900 Q9UHF7 TRPS1 Zinc finger transcription factor Trps1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 29.762 29.928 3 0.0012392 32899 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 42.568 32.497 85292000 0 0 0 9309600 4578500 6447200 7302100 5825700 3843300 7072400 0 10068000 8946900 7567300 14331000 4735 4900 4286 41074;41075;41076;41077;41078;41079;41080;41081;41082;41083;41084 32542;32543;32544;32545;32546 32546 3 ASLPVLQK Acetyl (Protein N-term) 896.53312 0.53311783 5173 Q9Y3R4 NEU2 Sialidase-2 yes yes 1 0 0 By MS/MS 10 0 1 1 75.058 74.538 2 0.023687 86322 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 41.892 11.472 10117000 0 0 0 10117000 0 0 0 0 0 0 0 0 0 0 0 4736 5173 4287 41085 32547 32547 1 ASLQETHFDSTQTK Unmodified 1591.7478 0.74781464 598 O94888 UBXN7 UBX domain-containing protein 7 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.67 1.49 1 20 1 1 1 2 2 2 1 2 2 1 2 2 2 31.309 31.304 2;3 1.0118E-12 34223 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 89.992 85.687 422620000 0 3899500 0 19097000 16705000 31617000 34614000 30664000 17544000 38516000 43137000 49276000 38572000 32272000 66707000 4737 598 4288 41086;41087;41088;41089;41090;41091;41092;41093;41094;41095;41096;41097;41098;41099;41100;41101;41102;41103;41104;41105;41106 32548;32549;32550;32551;32552;32553;32554;32555;32556;32557;32558;32559;32560;32561;32562 32551 13 ASLQGDVQK Unmodified 944.49271 0.49270958 214 O14777 NDC80 Kinetochore protein NDC80 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 15.905 15.919 2 0.0062061 15637 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 75.692 50.748 28603000 0 0 0 0 4072500 5803500 6892100 5467300 6368000 0 0 0 0 0 0 4738 214 4289 41107;41108;41109;41110;41111 32563;32564;32565;32566;32567 32564 5 ASLQLPMEK Unmodified 1015.5372 0.53721693 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 61.453 61.093 2 0.0082307 78281 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.709 59.405 131850000 0 59008000 0 5125500 4199000 5503400 3974300 10972000 2921000 6192500 7240700 7314400 5947600 6144800 7303400 4739 5189 4290 41112;41113;41114;41115;41116;41117;41118;41119;41120;41121;41122;41123;41124 32568;32569 32568 2 ASLQSGQEGAGDSPGSQFSK Unmodified 1936.8763 0.87626263 2187 Q12778 FOXO1 Forkhead box protein O1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 38.913 39.101 2 3.7408E-06 42547 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.467 72.21 35213000 0 0 0 2761200 1928900 3302400 3586100 1587600 0 0 4096000 4399700 4403100 2913200 6234900 4740 2187 4291 41125;41126;41127;41128;41129;41130;41131;41132;41133;41134 32570;32571 32571 2 ASLSAPGSEYGSPSVISVSK Unmodified 1921.9633 0.96328673 332 O43474 KLF4 Krueppel-like factor 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 70.584 70 2 3.8474E-47 80486 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 115.82 102.62 259800000 0 59531000 0 8444100 9014900 12627000 16191000 12613000 11889000 20759000 19684000 25308000 15704000 15001000 33030000 4741 332 4292 41135;41136;41137;41138;41139;41140;41141;41142;41143;41144;41145;41146;41147;41148 32572;32573;32574;32575;32576;32577;32578;32579;32580;32581;32582;32583;32584;32585;32586;32587 32581 15 ASLSLAPVNIFK Acetyl (Protein N-term) 1300.7391 0.73908786 1980 P78371 CCT2 T-complex protein 1 subunit beta yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.85 3.88 1 5 2 12 4 3 1 1 1 1 1 1 1 1 1 1 1 1 1 97.93 97.262 2 9.6737E-17 116472 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 152.86 141.25 7024500000 120780000 3817400000 1054800 35858000 147850000 224500000 160820000 172380000 139710000 453960000 297880000 322110000 148050000 263550000 718540000 4742 1980 4293 41149;41150;41151;41152;41153;41154;41155;41156;41157;41158;41159;41160;41161;41162;41163;41164;41165;41166;41167;41168 32588;32589;32590;32591;32592;32593;32594;32595;32596;32597;32598;32599;32600;32601;32602;32603;32604;32605;32606;32607;32608;32609;32610 32594 22 ASLSLIEK Unmodified 859.50148 0.50148335 1682 P52292 KPNA2 Importin subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 52.164 50.808 2 0.0068171 56402 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 95.531 36.549 2104800000 69744000 1112500000 35988000 0 46742000 92788000 75083000 56760000 58236000 89537000 87913000 111920000 93297000 60295000 113900000 4743 1682 4294 41169;41170;41171;41172;41173;41174;41175;41176;41177;41178;41179;41180;41181;41182;41183 32611;32612;32613;32614;32615;32616;32617;32618;32619;32620;32621;32622;32623;32624;32625;32626;32627;32628 32625 18 ASLSRPLNYEPHK Unmodified 1510.7892 0.78922595 4233 Q9BXS6 NUSAP1 Nucleolar and spindle-associated protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 35.367 35.565 3 0.0023968 39324 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 53.136 31.378 125630000 0 0 0 6722900 5433300 0 11656000 7967000 9061800 10104000 11530000 18979000 13016000 9157900 22007000 4744 4233 4295 41184;41185;41186;41187;41188;41189;41190;41191;41192;41193;41194 32629;32630;32631;32632;32633;32634;32635 32634 7 ASLTSRSQELDNK Unmodified 1447.7267 0.72668527 3507 Q8TDR0 TRAF3IP1 TRAF3-interacting protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 34.169 27.937 3 0.010407 39235 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 35.594 0 22499000 22499000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4745 3507 4296 41195 32636 32636 1 ASLTYAEAQLR Unmodified 1221.6354 0.63535107 5110 Q9Y2L1 DIS3 Exosome complex exonuclease RRP44 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 55.743 55.861 2 0.0072105 62402 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.608 18.051 96501000 0 0 0 4999400 4979200 10904000 7417400 0 0 12703000 14736000 12249000 6423200 8460200 13630000 4746 5110 4297 41196;41197;41198;41199;41200;41201;41202;41203;41204;41205 32637;32638;32639;32640;32641;32642;32643;32644;32645;32646 32640 10 ASLVALPEQTASEEETPPPLLTK Unmodified 2420.2686 0.26863645 4976 Q9UKV3 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.57 2.95 2 2 17 4 1 1 2 1 1 2 2 2 1 2 2 85.722 85.05 2;3 5.2717E-69 101252 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 139.83 132.29 471040000 0 325290000 0 0 10596000 9925800 9216000 13167000 7210800 18424000 12565000 20796000 6428500 13911000 23512000 4747 4976 4298 41206;41207;41208;41209;41210;41211;41212;41213;41214;41215;41216;41217;41218;41219;41220;41221;41222;41223;41224;41225;41226 32647;32648;32649;32650;32651;32652;32653;32654;32655;32656;32657;32658;32659;32660;32661;32662;32663;32664;32665;32666;32667 32656 21 ASLYNAVTIEDVQK Unmodified 1549.7988 0.79878758 5261 Q9Y617 PSAT1 Phosphoserine aminotransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 72.373 72.652 2 1.2052E-07 83654 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 92.112 75.48 56024000 0 0 0 0 0 0 0 0 0 0 11636000 9617900 0 6569300 28201000 4748 5261 4299 41227;41228;41229;41230 32668;32669;32670;32671 32669 4 ASMAGASSSK Unmodified 895.40693 0.40693104 2289 Q13428 TCOF1 Treacle protein yes yes 0 0 0 By MS/MS 2 0 1 1 5.5611 2.3207 2 0.0047232 4312 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.267 58.46 33221000 0 33221000 0 0 0 0 0 0 0 0 0 0 0 0 0 4749 2289 4300 41231 32672 32672 1 ASMGTLAFDEYGRPFLIIK Acetyl (Protein N-term) 2170.1133 0.1132622 1548 P48643 CCT5 T-complex protein 1 subunit epsilon yes yes 1 0 1 By MS/MS 2 0 2 2 100.17 95.453 2;3 2.4898E-69 118015 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 173.25 151.05 37700000 0 37700000 0 0 0 0 0 0 0 0 0 0 0 0 0 4750 1548 4301 41232;41233 32673;32674 32673 2 ASMHPVTAMLVGK Unmodified 1340.6945 0.69446263 896 P09960 LTA4H Leukotriene A-4 hydrolase yes yes 0 0 0 By MS/MS By MS/MS By matching 2 0 4 1 2 1 69.371 65.943 3 1.3214E-08 86847 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.53 99.618 68217000 43542000 24621000 54338 0 0 0 0 0 0 0 0 0 0 0 0 4751 896 4302 41234;41235;41236;41237 32675;32676 32676 2 ASMIAMMAGSDFIK Unmodified 1471.6873 0.68732834 5134 Q9Y315 DERA Deoxyribose-phosphate aldolase yes yes 0 0 0 By MS/MS 2 0 1 1 94.324 86.194 2 3.8108E-10 111583 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 103.34 84.027 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4752 5134 4303 41238 32677 32677 1 ASMLQEYSK Unmodified 1055.4957 0.49574604 5127 Q9Y2X9 ZNF281 Zinc finger protein 281 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 40.744 39.298 2 0.0093821 49937 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.476 63.504 20045000 0 14012000 0 0 0 0 0 0 1897800 0 0 4135100 0 0 0 4753 5127 4304 41239;41240;41241;41242;41243 32678;32679;32680;32681 32678 4 ASMQLEETGVHAPGASQPSALDQSK Oxidation (M) 2554.1969 0.19694485 3645 Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A yes yes 0 1 0 By MS/MS 2 0 1 1 56.089 50.274 3 5.1023E-19 64905 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.006 77.819 34179000 0 34179000 0 0 0 0 0 0 0 0 0 0 0 0 0 4754 3645 4305 41244 32682 32682 5163 1 ASMQLEETGVHAPGASQPSALDQSK Unmodified 2538.202 0.20203022 3645 Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 6.25 3.77 1 1 2 2 1 1 62.695 60.224 3 9.2318E-16 68275 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.06 61.079 53224000 0 38873000 0 0 0 0 0 0 0 0 0 0 0 5128300 9223300 4755 3645 4305 41245;41246;41247;41248 32683;32684;32685;32686 32684 4 ASMQQQQQLASAR Oxidation (M) 1461.6994 0.69942466 5179 Q9Y3Y2 CHTOP Chromatin target of PRMT1 protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.138 16.315 2 1.8835E-25 15754 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 160.18 129.11 85440000 0 0 0 4643600 4348600 5001900 6439800 3427900 4795900 5817700 6888800 13745000 11026000 7917500 11387000 4756 5179 4306 41249;41250;41251;41252;41253;41254;41255;41256;41257;41258;41259;41260 32687;32688;32689;32690;32691;32692;32693;32694;32695;32696;32697;32698;32699;32700;32701 32697 6549 15 ASMQQQQQLASAR Unmodified 1445.7045 0.70451004 5179 Q9Y3Y2 CHTOP Chromatin target of PRMT1 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.089 26.29 2 1.1628E-08 28292 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 128.17 111.14 135580000 0 0 0 8365400 10075000 8136100 9201300 8567600 6973200 10752000 14697000 17031000 13988000 12755000 15034000 4757 5179 4306 41261;41262;41263;41264;41265;41266;41267;41268;41269;41270;41271;41272 32702;32703;32704;32705;32706;32707;32708;32709;32710;32711;32712 32712 4 ASMRESDTGLWLHNK Acetyl (Protein N-term);Oxidation (M) 1801.8417 0.8417318 4381 Q9H3P2 NELFA Negative elongation factor A yes yes 1 1 1 By MS/MS By MS/MS 2 0 2 1 1 59.714 53.673 3 0.001566 72658 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.408 44.046 25827000 21191000 0 4636000 0 0 0 0 0 0 0 0 0 0 0 0 4758 4381 4307 41273;41274 32713 32713 5835 1 ASNGDAWVEAHGK Unmodified 1340.6109 0.61092723 1399 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 26.468 26.099 2;3 0.0034751 26466 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.569 42.404 35003000 0 0 7875400 7915000 0 0 2288700 0 4842800 0 0 0 0 3572700 8508700 4759 1399 4308 41275;41276;41277;41278;41279;41280 32714;32715;32716 32714 3 ASNGDITQAVSLLTDERVK Unmodified 2016.0487 0.048747692 3978 Q96RU2 USP28 Ubiquitin carboxyl-terminal hydrolase 28 yes yes 0 0 1 By MS/MS 2 0 1 1 89.589 84.716 3 0.00057056 105245 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 54.637 47.015 34127000 0 34127000 0 0 0 0 0 0 0 0 0 0 0 0 0 4760 3978 4309 41281 32717 32717 1 ASNGDTPTHEDLTK Unmodified 1484.6743 0.67431535 935 P11171 EPB41 Protein 4.1 yes yes 0 0 0 By MS/MS 2 0 1 1 19.685 16.109 3 0.028685 21116 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 19.095 14.943 23924000 0 23924000 0 0 0 0 0 0 0 0 0 0 0 0 0 4761 935 4310 41282 32718 32718 1 ASNGNARPETVTNDDEEALDEETK Unmodified 2604.1423 0.14232632 1596 P49756 RBM25 RNA-binding protein 25 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.887 42.064 3 1.1823E-281 47066 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 235.76 224.92 1011500000 0 0 0 55292000 64347000 60303000 69356000 46614000 65925000 102850000 126850000 98182000 93572000 81621000 146600000 4762 1596 4311 41283;41284;41285;41286;41287;41288;41289;41290;41291;41292;41293;41294 32719;32720;32721;32722;32723;32724;32725;32726;32727;32728;32729;32730;32731 32728 13 ASNLENSTYDLYTIPK Unmodified 1827.8891 0.88905915 1721 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.835 76.895 2 1.3047E-19 88302 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 128.9 96.893 743010000 0 0 0 22896000 37653000 56103000 44692000 59313000 43267000 82390000 67909000 88783000 52921000 71541000 115540000 4763 1721 4312 41295;41296;41297;41298;41299;41300;41301;41302;41303;41304;41305;41306 32732;32733;32734;32735;32736;32737;32738;32739;32740;32741;32742;32743 32735 12 ASNLLLNYK Unmodified 1034.576 0.57604528 4076 Q99986 VRK1 Serine/threonine-protein kinase VRK1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61.181 60.07 2 0.001193 78125 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.41 73.689 347990000 90077000 166410000 1604200 4893600 4918300 10252000 7212500 6679700 4955500 8390000 9044400 10856000 5375500 6223200 11093000 4764 4076 4313 41307;41308;41309;41310;41311;41312;41313;41314;41315;41316;41317;41318;41319;41320;41321 32744;32745;32746;32747 32745 4 ASNLQDLVYK Unmodified 1149.603 0.60298831 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.019 60.126 2 0.002198 68089 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 85.676 68.58 260200000 0 0 0 11790000 12780000 22353000 19942000 16913000 11336000 26274000 29981000 28841000 23712000 19390000 36886000 4765 643 4314 41322;41323;41324;41325;41326;41327;41328;41329;41330;41331;41332;41333 32748;32749;32750;32751;32752;32753;32754;32755;32756;32757;32758 32757 10 ASNPERGEILLTELQGDSR Acetyl (Protein N-term) 2126.0604 0.06037501 2604 Q16513 PKN2 Serine/threonine-protein kinase N2 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 2 2 1 1 2 2 2 2 1 2 83.627 83.691 2;3 3.7084E-06 96584 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.763 57.272 277800000 0 0 0 1371400 8139200 25985000 15001000 22985000 24990000 50519000 48305000 0 16932000 5672600 57895000 4766 2604 4315 41334;41335;41336;41337;41338;41339;41340;41341;41342;41343;41344;41345;41346;41347;41348;41349;41350;41351 32759;32760;32761;32762;32763;32764;32765;32766;32767;32768;32769 32763 10 ASNTAEVFFDGVR Unmodified 1411.6732 0.67319314 1591 P49748 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.415 75.467 2 5.1015E-09 87092 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 111.63 100.04 123820000 0 0 0 7203300 7566300 10522000 4941400 10464000 8414100 10661000 17971000 17647000 8552000 0 19880000 4767 1591 4316 41352;41353;41354;41355;41356;41357;41358;41359;41360;41361;41362;41363 32770;32771;32772;32773;32774;32775;32776;32777;32778;32779;32780;32781;32782;32783 32781 13 ASNVTNK Acetyl (Protein N-term) 774.38718 0.38718187 851 P07910;P0DMR1;O60812;B7ZW38;B2RXH8 HNRNPC;HNRNPCL4;HNRNPCL1;HNRNPCL3;HNRNPCL2 Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 2 yes no 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 7.58 3.57 4 2 13 3 2 1 1 1 1 1 1 1 2 1 1 1 1 1 11.454 10.971 2 0.0078678 10559 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 96.51 67.982 295550000 31745000 4461500 2137800 7685800 9852300 20351000 15608000 17375000 16177000 19730000 18163000 27601000 36148000 27201000 41318000 4768 851 4317 41364;41365;41366;41367;41368;41369;41370;41371;41372;41373;41374;41375;41376;41377;41378;41379;41380;41381;41382 32784;32785;32786;32787;32788;32789;32790;32791;32792;32793;32794;32795;32796 32786 13 ASNVTNKTDPR Acetyl (Protein N-term) 1243.6157 0.61567826 851 P07910 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 20.726 20.796 2 0.0006759 21679 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 93.649 58.354 25268000 0 0 0 5998200 5747300 0 5548300 0 0 2756000 0 0 0 0 5218800 4769 851 4318 41383;41384;41385;41386;41387 32797;32798;32799;32800;32801 32797 5 ASPAAPADGAAPAQPSIR Unmodified 1646.8376 0.8376327 4801 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 43.992 44.258 2 1.6223E-26 49802 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 109.44 96.257 107930000 0 0 0 0 0 9197600 11521000 10420000 12482000 13695000 16354000 0 16455000 0 17807000 4770 4801 4319 41388;41389;41390;41391;41392;41393;41394;41395;41396;41397 32802;32803;32804;32805;32806;32807;32808;32809;32810;32811 32803 10 ASPAFDYAEFEPHIVPSTK Unmodified 2105.0106 0.010571271 2542 Q15527 SURF2 Surfeit locus protein 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 82.994 83.161 3 1.075E-06 96021 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.21 67.953 33422000 0 0 0 0 0 0 0 3023700 4149300 8986000 0 0 0 0 17263000 4771 2542 4320 41398;41399;41400;41401 32812;32813;32814 32813 3 ASPAGGPLEDVVIER Unmodified 1508.7835 0.78347187 3744 Q96AY3 FKBP10 Peptidyl-prolyl cis-trans isomerase FKBP10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 75.336 75.353 2 0.00069015 86418 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.548 61.316 40780000 0 0 0 2967900 2370300 5184100 3643900 2510100 1882300 5199900 7776400 0 3842700 5402100 0 4772 3744 4321 41402;41403;41404;41405;41406;41407;41408;41409;41410;41411;41412 32815;32816;32817;32818;32819;32820;32821;32822;32823 32818 8 ASPAGTAGGPGAGAAAGGTGPLAAR Unmodified 1962.9872 0.98715049 2214 Q12962 TAF10 Transcription initiation factor TFIID subunit 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 1 2 2 2 1 2 2 2 2 2 48.023 48.19 2;3 3.9481E-109 54052 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 208.2 187.24 362510000 0 0 0 18915000 23226000 13947000 25926000 28308000 21152000 22121000 40328000 54835000 37011000 28154000 48590000 4773 2214 4322 41413;41414;41415;41416;41417;41418;41419;41420;41421;41422;41423;41424;41425;41426;41427;41428;41429;41430;41431;41432;41433;41434 32824;32825;32826;32827;32828;32829;32830;32831;32832;32833;32834;32835;32836;32837;32838 32825 15 ASPALVAK Unmodified 755.45414 0.45413923 3659 Q92783 STAM Signal transducing adapter molecule 1 yes yes 0 0 0 By MS/MS 2 0 1 1 24.83 20.702 1 0.021654 27247 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.57 25.853 21907000 0 21907000 0 0 0 0 0 0 0 0 0 0 0 0 0 4774 3659 4323 41435 32839 32839 1 ASPAPAPSR Unmodified 852.44537 0.44536545 1982 P78411 IRX5 Iroquois-class homeodomain protein IRX-5 yes yes 0 0 0 By MS/MS 10 0 1 1 8.3776 8.7366 2 0.03575 6838 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 45.972 4.7451 3967100 0 0 0 0 0 0 0 0 0 0 3967100 0 0 0 0 4775 1982 4324 41436 32840 32840 1 ASPATPAGHPVSGLLLR Unmodified 1642.9155 0.91548909 4518 Q9HCM7 FBRSL1 Fibrosin-1-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.434 65.521 3 0.00070174 74155 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.265 39.825 75889000 0 0 0 2348400 4760800 5735200 5644700 7154000 5590700 5168800 5648900 8965300 7906300 7287600 9678000 4776 4518 4325 41437;41438;41439;41440;41441;41442;41443;41444;41445;41446;41447;41448 32841;32842;32843;32844;32845;32846;32847;32848 32842 8 ASPATQPPPLLPPSATGPDATVGGPAPTPLLPPSATASVK Unmodified 3725.988 0.98799192 2138 Q07666 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 90.835 90.906 3;4 4.6815E-11 105672 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 36.035 35.615 412890000 0 0 0 5275400 24739000 17091000 18682000 25660000 15669000 68963000 52366000 54808000 11115000 25481000 93035000 4777 2138 4326 41449;41450;41451;41452;41453;41454;41455;41456;41457;41458;41459;41460;41461;41462;41463;41464;41465;41466;41467;41468;41469;41470;41471;41472 32849;32850;32851;32852;32853;32854;32855;32856;32857;32858;32859;32860;32861;32862 32855 13 ASPDGYDCYFDNVGGEFSNTVIGQMK Oxidation (M) 2886.2113 0.21127428 2454 Q14914 PTGR1 Prostaglandin reductase 1 yes yes 0 1 0 By MS/MS 2.5 0.5 2 2 4 89.215 85.173 2;3 2.2461E-38 105613 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.89 110.74 235010000 0 235010000 0 0 0 0 0 0 0 0 0 0 0 0 0 4778 2454 4327 41473;41474;41475;41476 32863;32864;32865;32866 32864 4033 4 ASPDGYDCYFDNVGGEFSNTVIGQMK Unmodified 2870.2164 0.21635966 2454 Q14914 PTGR1 Prostaglandin reductase 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 93.806 89.744 3 8.7225E-13 111221 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.799 75.722 109710000 0 109710000 0 0 0 0 0 0 0 0 0 0 0 0 0 4779 2454 4327 41477;41478 32867;32868 32867 2 ASPDLVPMGEWTAR Unmodified 1528.7344 0.73441319 689 O95782 AP2A1 AP-2 complex subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 80.554 80.634 2 0.00049078 92888 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.184 76.661 31512000 0 0 0 0 1543100 4524600 0 2997600 0 4771400 2402800 0 3009500 2290400 9972800 4780 689 4328 41479;41480;41481;41482;41483;41484;41485;41486 32869;32870 32869 2 ASPDQNASTHTPQSSVK Unmodified 1753.8231 0.82310485 2428 Q14677 CLINT1 Clathrin interactor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 14.781 14.951 2;3 3.1841E-25 13755 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 123.02 113.83 692930000 0 0 0 47392000 28788000 41746000 59423000 50835000 41447000 63036000 94069000 60612000 55709000 59245000 90625000 4781 2428 4329 41487;41488;41489;41490;41491;41492;41493;41494;41495;41496;41497;41498;41499;41500;41501;41502;41503;41504;41505;41506;41507;41508;41509;41510 32871;32872;32873;32874;32875;32876;32877;32878;32879;32880;32881;32882;32883;32884;32885 32874 13 ASPEAASTPRDPIDVDLPEEAER Unmodified 2464.1718 0.17177595 1253 P29590 PML Protein PML yes yes 0 0 1 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 72.769 72.968 3 1.7542E-10 83546 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.88 51.95 23464000 0 0 0 0 0 0 0 0 4613300 4759700 0 0 0 4442100 9648900 4782 1253 4330 41511;41512;41513;41514 32886;32887 32886 2 ASPEPEGEAAGK Unmodified 1141.5251 0.52513192 3213 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 11.567 11.656 2 0.005469 10413 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 54.191 38.225 66442000 0 0 0 0 6065200 7932300 7297600 7771700 7014600 8622000 0 0 10939000 10800000 0 4783 3213 4331 41515;41516;41517;41518;41519;41520;41521;41522 32888;32889;32890 32890 3 ASPEPQRENASPAPGTTAEEAMSR Unmodified 2483.1347 0.13467894 1502 P46379 BAG6 Large proline-rich protein BAG6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 41.943 42.12 3 1.1499E-67 46797 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 102.16 95.803 179200000 0 0 0 14270000 10733000 11972000 12065000 0 11522000 20788000 19681000 21108000 16974000 16428000 23661000 4784 1502 4332 41523;41524;41525;41526;41527;41528;41529;41530;41531;41532;41533 32891;32892;32893;32894;32895;32896;32897;32898;32899;32900;32901;32902;32903 32897 13 ASPEPQRENASPAPGTTAEEAMSR Oxidation (M) 2499.1296 0.12959356 1502 P46379 BAG6 Large proline-rich protein BAG6 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 29.865 30.225 3 7.6969E-15 31595 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.656 68.69 104200000 0 0 0 0 0 0 0 8188900 8770000 11451000 0 31274000 18442000 13766000 12312000 4785 1502 4332 41534;41535;41536;41537;41538;41539;41540 32904;32905;32906;32907;32908;32909;32910 32905 2371 7 ASPGGVSTSSSDGK Unmodified 1235.563 0.56297399 1736 P54259 ATN1 Atrophin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 2 1 1 1 1 1 8.9385 9.0754 2 0.0036942 6774 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.967 48.185 35802000 0 0 0 2320500 1518400 1357800 1980000 1402200 1202300 2572100 8217300 5711900 2589100 2230400 4700500 4786 1736 4333 41541;41542;41543;41544;41545;41546;41547;41548;41549;41550;41551;41552;41553 32911;32912;32913;32914;32915;32916 32912 6 ASPGLLPVANGNSLNK Unmodified 1550.8417 0.84165545 2450 Q14814 MEF2D Myocyte-specific enhancer factor 2D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.365 67.446 2 8.3704E-08 76431 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.189 73.649 261390000 0 0 0 16973000 11769000 19044000 19655000 17124000 17939000 23106000 27956000 30208000 21325000 23479000 32811000 4787 2450 4334 41554;41555;41556;41557;41558;41559;41560;41561;41562;41563;41564;41565 32917;32918;32919;32920;32921;32922;32923;32924;32925;32926;32927 32920 11 ASPGLSMPSSSPPIK Oxidation (M) 1470.7388 0.73882986 1795 P57682 KLF3 Krueppel-like factor 3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 46.328 46.27 2 0.00091114 51925 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 52.344 34.48 14360000 0 0 0 3007100 0 0 6048100 0 0 0 0 0 5305100 0 0 4788 1795 4335 41566;41567;41568;41569 32928;32929;32930;32931 32930 2913 4 ASPGLSMPSSSPPIK Unmodified 1454.7439 0.74391524 1795 P57682 KLF3 Krueppel-like factor 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.017 64.108 2 0.0045177 73324 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 53.967 42.938 100830000 0 0 0 5093500 4800100 7538700 9217000 6365900 5706800 11562000 11253000 10872000 6569700 8899200 12948000 4789 1795 4335 41570;41571;41572;41573;41574;41575;41576;41577;41578;41579;41580;41581 32932;32933;32934;32935;32936;32937;32938;32939 32937 8 ASPLFSQHTAADK Unmodified 1371.6783 0.67827852 2654 Q2NL82 TSR1 Pre-rRNA-processing protein TSR1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 2 2 2 1 1 2 2 1 2 2 33.278 33.459 2;3 0.0011792 35765 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.543 33.003 166680000 0 0 0 10763000 10401000 14116000 9438600 8825100 6676200 12859000 18986000 20033000 8642300 15014000 30924000 4790 2654 4336 41582;41583;41584;41585;41586;41587;41588;41589;41590;41591;41592;41593;41594;41595;41596;41597;41598;41599;41600;41601;41602 32940;32941;32942;32943;32944;32945;32946 32946 6 ASPLLPANHVTMAK Unmodified 1448.781 0.78096945 4626 Q9NSE4 IARS2 Isoleucine--tRNA ligase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 63.611 56.525 3 0.0015868 72960 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.937 46.375 85361000 49519000 35841000 0 0 0 0 0 0 0 0 0 0 0 0 0 4791 4626 4337 41603;41604 32947;32948;32949 32948 3 ASPLTHSPPDEL Unmodified 1262.6143 0.61428128 4134 Q9BT09 CNPY3 Protein canopy homolog 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 55.691 54.693 2 3.1211E-14 70861 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.1 115.36 353490000 0 229830000 0 11894000 9814200 0 10449000 10530000 9162100 17317000 0 24547000 0 0 29943000 4792 4134 4338 41605;41606;41607;41608;41609;41610;41611;41612;41613;41614 32950;32951;32952;32953;32954 32951 5 ASPLVAIGQTLAR Unmodified 1295.7561 0.75613491 4628 Q9NSI2 FAM207A Protein FAM207A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 83.04 83.104 2 0.017527 96444 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 38.875 20.435 165090000 0 0 0 5977700 7777900 13956000 9519400 10881000 12937000 18743000 17595000 20622000 11607000 13843000 21632000 4793 4628 4339 41615;41616;41617;41618;41619;41620;41621;41622;41623;41624;41625;41626 32955;32956 32955 1 ASPNLIGATGANSLGK Unmodified 1469.7838 0.78380622 2069 Q02078 MEF2A Myocyte-specific enhancer factor 2A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.93 60.037 2 0.001308 68437 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 61.641 46.376 82157000 0 0 0 4000200 3902400 4601600 6312800 5569600 4610400 8797800 8509500 8108500 6868100 7356100 13520000 4794 2069 4340 41627;41628;41629;41630;41631;41632;41633;41634;41635;41636;41637;41638 32957;32958;32959;32960;32961;32962;32963;32964;32965;32966;32967 32962 11 ASPNPVAMETR Unmodified 1171.5656 0.56555694 4325 Q9H0E3 SAP130 Histone deacetylase complex subunit SAP130 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.405 36.586 2 0.0065154 39074 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.359 40.156 104840000 0 0 0 5844100 5709300 7455400 6138500 8446700 6847300 8585200 8002800 13291000 10704000 11369000 12443000 4795 4325 4341 41639;41640;41641;41642;41643;41644;41645;41646;41647;41648;41649;41650 32968;32969;32970;32971;32972;32973;32974 32968 7 ASPNTPPGRVDENGPELLPR Unmodified 2115.0709 0.070880117 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.739 60.843 3 1.0854E-09 69101 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 51.611 43.131 298610000 0 0 0 11397000 17028000 26925000 16604000 26127000 11652000 26274000 27907000 39322000 23027000 26378000 45964000 4796 3641 4342 41651;41652;41653;41654;41655;41656;41657;41658;41659;41660;41661;41662 32975;32976;32977;32978;32979;32980;32981;32982;32983;32984;32985 32984 9 ASPNVEAPQPHR Unmodified 1301.6476 0.64764709 1638 P50851 LRBA Lipopolysaccharide-responsive and beige-like anchor protein yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 2 22.481 22.713 3 0.019793 23775 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 36.847 23.168 100840000 0 0 0 6261100 3490000 8423100 5209300 5616400 4728300 13333000 10355000 16544000 11126000 0 15757000 4797 1638 4343 41663;41664;41665;41666;41667;41668;41669;41670;41671;41672;41673;41674 32986;32987;32988 32986 1 ASPPACPSEEDESLK Acetyl (Protein N-term) 1657.7141 0.71413125 1299 P31321 PRKAR1B cAMP-dependent protein kinase type I-beta regulatory subunit yes yes 1 0 0 By MS/MS 1 0 1 1 96.139 101.4 2 0.00030474 80241 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 78.324 73.858 9602600 9602600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4798 1299 4344 41675 32989;32990 32989 2 ASPPGGLAEPPGSAGPQAGPTVVPGSATPMETGIAETPEGR Unmodified 3794.8421 0.84213232 397 O60341 KDM1A Lysine-specific histone demethylase 1A yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 15 2 1 1 2 1 2 1 2 2 1 81.948 82.029 3;4 4.7519E-17 95014 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 41.479 37.035 57446000 0 0 0 0 4406700 3183200 2772500 8583400 2693200 7594900 6540300 0 5456700 9065300 7150000 4799 397 4345 41676;41677;41678;41679;41680;41681;41682;41683;41684;41685;41686;41687;41688;41689;41690 32991;32992;32993;32994;32995;32996;32997 32993 7 ASPPGGLAEPPGSAGPQAGPTVVPGSATPMETGIAETPEGR Oxidation (M) 3810.837 0.83704694 397 O60341 KDM1A Lysine-specific histone demethylase 1A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 78.158 78.179 3 1.4968E-45 90560 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.64 52.023 31975000 0 0 0 0 7330700 0 0 7005600 0 0 0 17638000 0 0 0 4800 397 4345 41691;41692;41693 32998;32999;33000 32999 498 3 ASPQENGPAVHK Unmodified 1233.6102 0.61019895 2736 Q5JSZ5 PRRC2B Protein PRRC2B yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 9.1581 9.3072 3 0.0091705 7468 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 43.544 35.144 50676000 0 0 0 5122500 3874900 3777700 0 4262800 3380800 3672900 2658100 9512500 4490900 3515500 6407700 4801 2736 4346 41694;41695;41696;41697;41698;41699;41700;41701;41702;41703;41704 33001;33002 33001 2 ASPQSEFMPSK Unmodified 1207.5543 0.55432356 4577 Q9NQW6 ANLN Actin-binding protein anillin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 43.699 43.836 2 0.024027 49299 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 44.392 26.08 51225000 0 0 0 3772700 0 8384300 6491300 0 0 15017000 0 0 6383400 0 11176000 4802 4577 4347 41705;41706;41707;41708;41709;41710 33003 33003 1 ASPQSEFMPSK Oxidation (M) 1223.5492 0.54923818 4577 Q9NQW6 ANLN Actin-binding protein anillin yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 30.161 30.376 2 0.0089116 33128 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 46.462 29.686 44985000 0 0 0 3040300 3436500 0 4070100 3514700 2838000 0 3587000 6036300 6474700 4899200 7088300 4803 4577 4347 41711;41712;41713;41714;41715;41716;41717;41718;41719;41720 33004;33005 33004 5980 2 ASPSCSSPTRDSSGVPVSK Unmodified 1904.8898 0.88980421 3348 Q8N5I9 C12orf45 Uncharacterized protein C12orf45 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 28.122 23.827 3 0.00011937 31380 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 45.347 35.428 24090000 0 24090000 0 0 0 0 0 0 0 0 0 0 0 0 0 4804 3348 4348 41721;41722 33006;33007;33008 33006 3 ASPSENNAGGGSPSSGSGGNPTNTSGTTR Unmodified 2605.1237 0.12365656 4604 Q9NRH2 SNRK SNF-related serine/threonine-protein kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.076 45.247 3 0.0061129 49843 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 11.517 3.678 509770000 0 0 0 25652000 21797000 29202000 46149000 35659000 37313000 40410000 53213000 49776000 37991000 59887000 72717000 4805 4604 4349 41723;41724;41725;41726;41727;41728;41729;41730;41731;41732;41733;41734 33009 33009 1 ASPSGQNISYIHSSSESVTPR Unmodified 2203.0505 0.050538606 4763 Q9NZC9 SMARCAL1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 48.188 48.188 3 0.0020068 53725 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 34.658 24.155 39913000 0 0 0 6822200 5843100 0 8562300 0 0 0 0 10155000 8530700 0 0 4806 4763 4350 41735;41736;41737;41738;41739 33010 33010 1 ASPSLERPEK Acetyl (Protein N-term) 1154.5932 0.5931519 2324 Q13601 KRR1 KRR1 small subunit processome component homolog yes yes 1 0 1 By MS/MS By MS/MS By matching 7.33 3.77 1 2 1 1 1 31.909 30.405 2 0.0040253 38127 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.547 59.776 56501000 0 41359000 0 0 0 8440600 0 0 6702100 0 0 0 0 0 0 4807 2324 4351 41740;41741;41742 33011;33012 33012 2 ASPSPQPSSQPLQIHR Unmodified 1728.8907 0.89073091 4505 Q9HC35 EML4 Echinoderm microtubule-associated protein-like 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.766 41.943 3 1.8648E-05 46312 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 77.42 70.84 345220000 0 0 0 16831000 16110000 21337000 16035000 17042000 19082000 30099000 49116000 35236000 30986000 35203000 58143000 4808 4505 4352 41743;41744;41745;41746;41747;41748;41749;41750;41751;41752;41753;41754 33013;33014;33015;33016;33017;33018;33019;33020;33021;33022;33023;33024;33025 33023 11 ASPSPQPSSQPLQIHRQTPESK Unmodified 2399.2193 0.21933527 4505 Q9HC35 EML4 Echinoderm microtubule-associated protein-like 4 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 42.953 37.715 4 0.00078913 51956 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 39.171 24.557 27924000 25097000 0 2828000 0 0 0 0 0 0 0 0 0 0 0 0 4809 4505 4353 41755;41756 33026 33026 1 ASPSTAGETPSGVK Unmodified 1287.6307 0.63065962 4916 Q9UI10 EIF2B4 Translation initiation factor eIF-2B subunit delta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.966 20.168 2 0.0005846 19487 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 82.171 58.798 164050000 0 0 0 12147000 9296500 13314000 11134000 10846000 9166600 15463000 17520000 21928000 13335000 11663000 18235000 4810 4916 4354 41757;41758;41759;41760;41761;41762;41763;41764;41765;41766;41767;41768 33027;33028;33029;33030;33031;33032;33033;33034;33035;33036;33037;33038;33039;33040 33036 14 ASPSYSALDK Unmodified 1037.5029 0.50293991 4741 Q9NYD6 HOXC10 Homeobox protein Hox-C10 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 30.434 31.024 2 0.045745 33430 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 53.317 35.921 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4811 4741 4355 41769;41770 33041;33042 33041 2 ASPVPAPSSGLHAAVR Unmodified 1515.8158 0.81577505 4802 Q9P206 KIAA1522 Uncharacterized protein KIAA1522 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 48.063 47.706 3 0.0032419 54500 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 42.338 35.757 42438000 0 0 0 14244000 12223000 0 15971000 0 0 0 0 0 0 0 0 4812 4802 4356 41771;41772;41773 33043;33044;33045 33044 2 ASQAEISSLQSVR Unmodified 1374.7103 0.71030693 2155 Q08378 GOLGA3 Golgin subfamily A member 3 yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 49.615 49.754 2 0.0058116 55109 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.694 44.163 36503000 0 0 0 0 6076800 0 0 0 0 0 0 0 0 13190000 17236000 4813 2155 4357 41774;41775;41776 33046 33046 1 ASQAGQTALMLAVSHGR Unmodified 1696.8679 0.86788698 2839;2429 Q63ZY3;Q14678 KANK2;KANK1 KN motif and ankyrin repeat domain-containing protein 2;KN motif and ankyrin repeat domain-containing protein 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 67.119 67.37 3 0.00042482 77257 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 55.864 48.494 46492000 0 0 0 0 0 8432600 0 6499400 0 6824600 6105300 7035100 0 0 11595000 4814 2839;2429 4358 41777;41778;41779;41780;41781;41782 33047;33048;33049;33050 33048 4 ASQDPFLQHVNK Unmodified 1382.6943 0.69426293 2853 Q68CQ4 DIEXF Digestive organ expansion factor homolog yes yes 0 0 0 By MS/MS 2 0 1 1 47.398 43.518 3 0.0011956 54851 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 68.536 59.939 15420000 0 0 15420000 0 0 0 0 0 0 0 0 0 0 0 0 4815 2853 4359 41783 33051;33052 33052 2 ASQDPFPAAIILK Unmodified 1369.7606 0.76055158 3905 Q96KB5 PBK Lymphokine-activated killer T-cell-originated protein kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 88.093 86.975 2 0.002511 100877 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 65.933 58.782 1602200000 33743000 1245500000 22477000 12750000 14313000 32576000 20634000 18793000 13946000 35370000 26103000 29513000 14947000 22912000 58696000 4816 3905 4360 41784;41785;41786;41787;41788;41789;41790;41791;41792;41793;41794;41795;41796;41797;41798;41799 33053;33054;33055;33056;33057;33058;33059;33060;33061;33062;33063 33063 11 ASQEDANEIK Unmodified 1103.5095 0.50948185 2816 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 2 1 1 1 1 1 1 1 1 1 11.34 11.422 2 9.73E-10 10113 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 152.11 93.516 96943000 0 0 0 7896700 5675700 8369600 9618300 9601400 7397300 0 14618000 17746000 16020000 0 0 4817 2816 4361 41800;41801;41802;41803;41804;41805;41806;41807;41808;41809;41810;41811 33064;33065;33066;33067;33068;33069;33070;33071;33072;33073;33074 33073 10 ASQEGGDVLGAR Unmodified 1158.5629 0.56291441 2760 Q5SW96 LDLRAP1 Low density lipoprotein receptor adapter protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 26.699 26.988 2 0.014933 29192 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 43.282 24.025 36235000 0 0 0 4341300 0 10318000 0 0 0 0 0 11918000 0 0 9657700 4818 2760 4362 41812;41813;41814;41815 33075;33076 33076 2 ASQEHHLSEETK Unmodified 1394.6426 0.64262129 1396 P38398 BRCA1 Breast cancer type 1 susceptibility protein yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 7.1532 4.3652 3 0.0039045 6241 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 60.628 47.833 19206000 0 4585800 14621000 0 0 0 0 0 0 0 0 0 0 0 0 4819 1396 4363 41816;41817 33077;33078 33078 2 ASQEPSPK Unmodified 842.4134 0.41339662 3781 Q96CP2 FLYWCH2 FLYWCH family member 2 yes yes 0 0 0 By MS/MS 1 0 1 1 106.89 112.15 2 0.0096686 92939 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 113.89 74.867 21247000 21247000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4820 3781 4364 41818 33079 33079 1 ASQEPSPKPGTEVIPAAPR Unmodified 1931.0112 0.011239973 3781 Q96CP2 FLYWCH2 FLYWCH family member 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 2 1 2 1 1 2 2 2 2 2 2 49.431 49.631 2;3 1.1691E-51 55466 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 184.76 161.54 2091000000 0 0 0 131650000 187810000 52541000 226540000 141980000 43809000 138360000 257090000 280550000 199630000 159730000 271360000 4821 3781 4365 41819;41820;41821;41822;41823;41824;41825;41826;41827;41828;41829;41830;41831;41832;41833;41834;41835;41836;41837;41838 33080;33081;33082;33083;33084;33085;33086;33087;33088;33089;33090;33091;33092;33093;33094 33092 12 ASQEPSPKPGTEVIPAAPRK Unmodified 2059.1062 0.10620299 3781 Q96CP2 FLYWCH2 FLYWCH family member 2 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 40.65 40.814 3 0.011634 44893 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 41.905 27.651 66823000 0 0 0 3984100 4016100 3738800 6994600 0 4570200 8769600 7811900 7928500 0 10587000 8422000 4822 3781 4366 41839;41840;41841;41842;41843;41844;41845;41846;41847;41848 33095;33096;33097;33098 33098 1 ASQGLLSSIENSESDSSEAK Unmodified 2037.9338 0.93383709 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 68.878 68.905 2 1.0075E-14 78968 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 107.74 93.772 49650000 0 0 0 2838700 4222500 5526200 4513800 2622200 3870100 5596800 6240200 8589900 5629300 0 0 4823 2804 4367 41849;41850;41851;41852;41853;41854;41855;41856;41857;41858;41859 33099;33100;33101;33102;33103;33104;33105;33106;33107;33108;33109 33107 11 ASQGPVYK Unmodified 848.43922 0.43921744 5120 Q9Y2V2 CARHSP1 Calcium-regulated heat stable protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 11.338 11.529 2 0.020537 9484 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 62.717 25.623 81869000 0 0 0 0 5376600 7311500 0 5143700 6041900 6201500 9052800 11302000 7621400 9128900 14688000 4824 5120 4368 41860;41861;41862;41863;41864;41865;41866;41867;41868;41869 33110 33110 1 ASQGSTLVHPFR Unmodified 1298.6731 0.67313356 1970 P78316 NOP14 Nucleolar protein 14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.505 42.682 3 0.0026865 47763 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 56.551 50.678 282080000 0 0 0 23331000 15521000 26928000 13098000 18853000 23438000 29931000 18751000 37359000 23294000 15881000 35691000 4825 1970 4369 41870;41871;41872;41873;41874;41875;41876;41877;41878;41879;41880;41881 33111;33112;33113;33114;33115;33116;33117;33118 33113 7 ASQLSVQQNK Unmodified 1101.5778 0.57783619 464 O75152;A0A1B0GTU1 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.513 15.683 2 0.00054565 15152 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 133.12 106.68 264030000 0 0 0 11956000 13025000 14169000 19146000 14667000 13799000 17901000 28838000 37061000 26552000 26899000 40013000 4826 464 4370 41882;41883;41884;41885;41886;41887;41888;41889;41890;41891;41892;41893 33119;33120;33121;33122;33123;33124;33125;33126;33127;33128;33129;33130 33128 12 ASQLVDVEK Unmodified 987.52368 0.52367535 2097;913 Q03468;P0DP91 ERCC6 DNA excision repair protein ERCC-6 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.842 33.026 2 0.0038307 34686 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 96.668 53.422 297120000 0 0 0 24864000 18765000 19415000 18861000 18810000 12046000 32434000 34437000 32904000 29712000 20809000 34063000 4827 2097;913 4371 41894;41895;41896;41897;41898;41899;41900;41901;41902;41903;41904;41905 33131;33132;33133;33134;33135;33136;33137;33138;33139;33140 33137 4 ASQLVGIEK Unmodified 943.53385 0.53384611 4547 Q9NPD8 UBE2T Ubiquitin-conjugating enzyme E2 T yes yes 0 0 0 By MS/MS 3 0 1 1 41.062 36.361 2 0.030897 45322 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 95.608 27.225 10561000 0 10561000 0 0 0 0 0 0 0 0 0 0 0 0 0 4828 4547 4372 41906 33141 33141 0 ASQLVSEK Unmodified 860.46035 0.46034682 4074 Q99961 SH3GL1 Endophilin-A2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 13.063 12.568 2 0.0052397 11161 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 143.61 52.624 318890000 15219000 203460000 0 8633000 7045200 11520000 11318000 7828100 0 11147000 11815000 10051000 0 6249600 14609000 4829 4074 4373 41907;41908;41909;41910;41911;41912;41913;41914;41915;41916;41917;41918 33142;33143;33144;33145;33146;33147;33148;33149 33144 7 ASQNLVVLAR Unmodified 1069.6244 0.62439245 4387 Q9H3U1 UNC45A Protein unc-45 homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 54.077 54.214 2 0.0018247 61249 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 101.25 76.33 322100000 0 0 0 23758000 14390000 27896000 21336000 17023000 14207000 34934000 32665000 33799000 31294000 19281000 51518000 4830 4387 4374 41919;41920;41921;41922;41923;41924;41925;41926;41927;41928;41929;41930 33150;33151;33152;33153;33154;33155;33156;33157;33158;33159;33160;33161 33151 12 ASQNLVVLAREDAGAEK Unmodified 1769.9272 0.92717599 4387 Q9H3U1 UNC45A Protein unc-45 homolog A yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 66.12 61.284 3 0.012823 76272 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 37.083 25.804 87698000 0 21742000 65955000 0 0 0 0 0 0 0 0 0 0 0 0 4831 4387 4375 41931;41932 33162 33162 1 ASQNRDPAATSVAAAR Acetyl (Protein N-term) 1626.8074 0.80739521 179 O00762 UBE2C Ubiquitin-conjugating enzyme E2 C yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 33.53 33.782 2 0.0051596 37011 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 42.556 26.665 71697000 0 0 0 5692000 0 0 7926900 4369600 4555800 11351000 10465000 12608000 0 0 14729000 4832 179 4376 41933;41934;41935;41936;41937;41938;41939;41940 33163;33164 33163 2 ASQNRDPAATSVAAARK Acetyl (Protein N-term) 1754.9024 0.90235823 179 O00762 UBE2C Ubiquitin-conjugating enzyme E2 C yes yes 1 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 27.452 27.399 3 1.7134E-19 28468 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 104.21 85.842 171170000 0 0 9904700 8892400 0 24316000 12213000 10729000 0 18641000 19181000 23119000 11830000 8873900 23471000 4833 179 4377 41941;41942;41943;41944;41945;41946;41947;41948;41949;41950;41951 33165;33166;33167;33168;33169;33170;33171;33172;33173;33174;33175;33176;33177 33173 13 ASQPDLVDTPTSSKPQPK Unmodified 1894.9636 0.96362108 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.467 37.647 3 0.0054313 41489 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 31.462 27.913 163330000 0 0 0 10757000 11520000 10225000 13946000 13762000 9375200 17322000 16256000 16671000 15276000 11489000 16732000 4834 1492 4378 41952;41953;41954;41955;41956;41957;41958;41959;41960;41961;41962;41963 33178;33179;33180;33181;33182;33183;33184;33185;33186;33187;33188 33185 8 ASQQEIQHIVNR Unmodified 1421.7375 0.73752473 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 36.801 37.187 2;3 0.0033909 41132 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 60.518 45.845 108450000 0 0 0 0 0 0 0 32319000 0 0 0 64226000 6563500 5340000 0 4835 19 4379 41964;41965;41966;41967 33189;33190;33191 33191 3 ASQQINALR Unmodified 999.54614 0.54614213 3101 Q7Z4S6 KIF21A Kinesin-like protein KIF21A yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 26.715 26.852 2 0.032189 29071 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 47.443 22.812 90335000 0 0 0 9854600 5028100 8733600 7104900 10384000 4961800 11988000 12781000 0 0 7718800 11781000 4836 3101 4380 41968;41969;41970;41971;41972;41973;41974;41975;41976;41977 33192 33192 1 ASQQQQTNSIR Unmodified 1259.6218 0.62182627 448 O60934 NBN Nibrin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 8.0818 8.2126 2 0.0027105 6219 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 66.435 39.32 18417000 0 0 0 1249500 1017200 1375200 945910 886730 1312300 1679800 3118300 1852400 1810100 1160900 2008700 4837 448 4381 41978;41979;41980;41981;41982;41983;41984;41985;41986;41987;41988;41989 33193;33194;33195 33193 3 ASQRLISQDIHSNTYNYK Unmodified 2137.0552 0.055230053 3790 Q96D46 NMD3 60S ribosomal export protein NMD3 yes yes 0 0 1 By MS/MS 2 0 2 2 54.021 45.958 3;4 3.7188E-05 63101 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.239 60.767 33725000 33725000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4838 3790 4382 41990;41991 33196;33197 33196 2 ASQSQGIQQLLQAEK Acetyl (Protein N-term) 1669.8635 0.8635131 483 O75348;O95670 ATP6V1G1;ATP6V1G2 V-type proton ATPase subunit G 1;V-type proton ATPase subunit G 2 yes no 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.31 2.4 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 84.918 85.382 2;3 1.3757E-84 96590 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 225.23 198.55 169520000 7429600 0 0 8404500 11122000 8917500 9595200 8120200 7325900 16125000 23213000 16233000 8188200 15938000 28908000 4839 483 4383 41992;41993;41994;41995;41996;41997;41998;41999;42000;42001;42002;42003;42004 33198;33199;33200;33201;33202;33203;33204;33205;33206;33207;33208;33209;33210;33211;33212 33205 15 ASQSRPNSSALETLGGEK Unmodified 1830.9072 0.90716883 586 O94804 STK10 Serine/threonine-protein kinase 10 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 47.908 42.032 3 4.9386E-05 58035 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.555 61.273 26001000 16018000 0 9983200 0 0 0 0 0 0 0 0 0 0 0 0 4840 586 4384 42005;42006 33213;33214 33213 2 ASQYLSR Unmodified 823.41882 0.41881635 2706 Q53LP3 SOWAHC Ankyrin repeat domain-containing protein SOWAHC yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 16.027 16.205 2 0.025165 16008 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 81.32 34.518 71238000 0 0 0 4648200 3929400 5239400 6502600 5756700 0 5131600 9276000 7109600 6334200 9289200 8021000 4841 2706 4385 42007;42008;42009;42010;42011;42012;42013;42014;42015;42016;42017 33215;33216;33217;33218 33217 4 ASQYLSRSIAEEIK Unmodified 1593.8362 0.83623572 2706 Q53LP3 SOWAHC Ankyrin repeat domain-containing protein SOWAHC yes yes 0 0 1 By MS/MS 2 0 1 1 71.342 63.075 3 0.0041193 83980 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 44.457 25.381 33332000 33332000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4842 2706 4386 42018 33219;33220 33220 2 ASRDQLIAQDVTAK Unmodified 1514.8053 0.80526994 3082 Q7Z3E2 CCDC186 Coiled-coil domain-containing protein 186 yes yes 0 0 1 By MS/MS 2 0 1 1 44.689 40.919 3 0.02656 51549 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 26.781 14.513 3482400 0 0 3482400 0 0 0 0 0 0 0 0 0 0 0 0 4843 3082 4387 42019 33221 33221 1 ASRDSILSEMK Unmodified 1235.618 0.61798644 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 0 1 By MS/MS By matching 2 0 2 1 1 54.62 47.65 3 0.0021833 65073 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.842 46.183 171500000 149680000 21814000 0 0 0 0 0 0 0 0 0 0 0 0 0 4844 5071 4388 42020;42021 33222 33222 1 ASREATSSTSNFSSLSSK Unmodified 1845.8704 0.87044898 4814 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 37.173 32.2 3 4.8264E-06 40944 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 90.654 80.187 48337000 37918000 0 10419000 0 0 0 0 0 0 0 0 0 0 0 0 4845 4814 4389 42022;42023 33223;33224;33225;33226 33226 4 ASREEILAQAK Unmodified 1214.6619 0.66190017 1356 P35579 MYH9 Myosin-9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 27 3 2 2 2 3 2 2 3 2 2 2 2 27.615 27.804 2;3 0.00020476 29867 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 94.465 72.707 9438500000 0 0 0 509490000 611400000 825220000 733490000 559100000 483520000 742500000 1043800000 1491400000 840110000 690410000 907920000 4846 1356 4390 42024;42025;42026;42027;42028;42029;42030;42031;42032;42033;42034;42035;42036;42037;42038;42039;42040;42041;42042;42043;42044;42045;42046;42047;42048;42049;42050 33227;33228;33229;33230;33231;33232;33233;33234;33235;33236;33237;33238;33239;33240;33241;33242;33243;33244;33245;33246;33247;33248;33249;33250;33251;33252;33253;33254 33237 16 ASREESWESGRSER Unmodified 1664.7503 0.75027426 4557 Q9NQ29 LUC7L Putative RNA-binding protein Luc7-like 1 yes yes 0 0 2 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 13.748 13.903 4 0.011604 12519 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 27.58 9.6625 19080000 0 0 0 2216200 2143100 0 0 0 0 0 0 6600300 0 2902300 5218600 4847 4557 4391 42051;42052;42053;42054;42055 33255;33256 33255 2 ASRETINCLK Unmodified 1190.6078 0.60775611 673 O95619 YEATS4 YEATS domain-containing protein 4 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 6.57 3.96 3 4 2 1 1 1 1 1 23.334 21.974 2;3 0.011003 32398 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.439 45.196 141890000 118380000 72991 0 0 0 0 5934300 0 0 0 7096300 0 0 6085800 4319300 4848 673 4392 42056;42057;42058;42059;42060;42061;42062 33257;33258;33259 33257 2 ASRGGGNHQNNYQPY Unmodified 1661.7295 0.72947924 236 O14979 HNRNPDL Heterogeneous nuclear ribonucleoprotein D-like yes yes 0 0 1 By MS/MS 2 0 1 1 21.676 16.856 3 0.0031181 24254 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.598 48.121 10995000 10995000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4849 236 4393 42063 33260 33260 1 ASRLLLNNGAK Acetyl (Protein N-term) 1197.683 0.68296996 1013 P15121 AKR1B1 Aldose reductase yes yes 1 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 64.023 58.033 2 0.00091142 77524 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.254 60.527 90029000 74932000 12959000 2137400 0 0 0 0 0 0 0 0 0 0 0 0 4850 1013 4394 42064;42065;42066 33261 33261 1 ASRSPLVTGSPK Unmodified 1198.667 0.66698555 2180 Q10571 MN1 Probable tumor suppressor protein MN1 yes yes 0 0 1 By MS/MS 10 0 1 1 27.605 28.293 3 0.044778 29402 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 24.071 6.7041 7219200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7219200 4851 2180 4395 42067 33262 33262 1 ASRTARIASDEEIQGTK Unmodified 1831.9388 0.93880331 3581 Q8WX93 PALLD Palladin yes yes 0 0 2 By MS/MS 2 0 2 2 30.404 24.685 3;4 0.013563 34751 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 33.36 19.942 90700000 90700000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4852 3581 4396 42068;42069 33263;33264 33264 2 ASRVPSSDEEVVEEPQSR Unmodified 1999.9447 0.94467655 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 37.033 37.295 3 0.001902 41662 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 33.667 19.763 21297000 0 0 0 0 2521600 0 0 0 1750000 3959500 0 8269300 0 0 4796700 4853 4285 4397 42070;42071;42072;42073;42074;42075 33265;33266;33267 33267 2 ASRVSAENLQK Unmodified 1201.6415 0.64149908 417 O60610 DIAPH1 Protein diaphanous homolog 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 19.472 15.877 3 1.0117E-05 22731 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.334 67.607 1282700000 1154200000 66331000 62149000 0 0 0 0 0 0 0 0 0 0 0 0 4854 417 4398 42076;42077;42078 33268;33269 33268 1 ASSAAGLTAAVVRDEESHEFVIEAGALMLADNGVCCIDEFDK Unmodified 4467.0669 0.066865236 2415 Q14566 MCM6 DNA replication licensing factor MCM6 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 99.344 93.515 4 5.723E-133 118222 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 129.51 125.35 53597000 53597000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4855 2415 4399 42079;42080 33270;33271 33271 2 ASSAQSGGSSGGPAVPTVQR Acetyl (Protein N-term) 1841.8868 0.88676774 3039 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.158 49.317 2 7.893E-62 54803 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 174.59 153.74 262300000 0 0 0 9617300 8305300 26784000 16641000 11610000 10048000 37437000 23700000 38678000 19577000 16880000 43024000 4856 3039 4400 42081;42082;42083;42084;42085;42086;42087;42088;42089;42090;42091;42092 33272;33273;33274;33275;33276;33277;33278;33279;33280;33281;33282;33283 33275 12 ASSASAPSSTPTGTTVVK Unmodified 1647.8315 0.83154427 2935 Q6P4R8 NFRKB Nuclear factor related to kappa-B-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.487 33.672 2 1.4758E-07 36848 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 101.89 91.517 123520000 0 0 0 5031900 6766200 6625400 8876100 9865400 7515300 11235000 13889000 18748000 12687000 8858000 13422000 4857 2935 4401 42093;42094;42095;42096;42097;42098;42099;42100;42101;42102;42103;42104 33284;33285;33286;33287;33288;33289;33290;33291;33292;33293;33294;33295 33285 12 ASSASVPAVGASAEGTRR Unmodified 1672.8493 0.84926002 4257 Q9BZ23 PANK2 Pantothenate kinase 2, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 2 2 2 1 2 2 31.988 32.072 2;3 4.4504E-08 34172 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 65.105 55.005 397290000 0 0 0 49758000 96134000 80998000 0 0 0 32230000 52189000 85982000 0 0 0 4858 4257 4402 42105;42106;42107;42108;42109;42110;42111;42112;42113;42114;42115 33296;33297;33298;33299;33300;33301;33302;33303;33304;33305 33301 8 ASSCTPVPVTMTATPPLPK Oxidation (M) 1969.9853 0.9852845 2810 Q5VT52 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 70.695 70.808 2 0.00020977 81060 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 51.774 43.045 71037000 0 0 0 0 5128000 7163600 7093100 0 7069300 8641400 0 14025000 7368200 7088200 7460100 4859 2810 4403 42116;42117;42118;42119;42120;42121;42122;42123;42124 33306;33307;33308;33309;33310;33311;33312;33313 33308 4441 8 ASSCTPVPVTMTATPPLPK Unmodified 1953.9904 0.99036988 2810 Q5VT52 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.223 79.264 2 2.7358E-12 91657 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 113.99 104.98 120900000 0 0 0 5775500 5757400 10046000 5941300 0 7257400 12533000 17603000 24432000 11031000 0 20520000 4860 2810 4403 42125;42126;42127;42128;42129;42130;42131;42132;42133;42134;42135 33314;33315;33316;33317;33318;33319;33320;33321;33322;33323;33324 33319 11 ASSDIQVK Acetyl (Protein N-term) 888.45526 0.45526144 1043 P16949 STMN1 Stathmin yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.22 4.24 2 2 5 3 1 1 1 1 1 1 49.94 49.927 1;2 0.0073581 86348 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 75.189 45.383 928260000 534840000 65660000 0 14143000 11840000 0 0 0 0 0 83325000 0 0 77546000 140900000 4861 1043 4404 42136;42137;42138;42139;42140;42141;42142;42143;42144 33325;33326;33327;33328;33329 33325 5 ASSDLEQLCSHVNEK Acetyl (Protein N-term) 1757.789 0.78902753 3756 Q96BD8 SKA1 Spindle and kinetochore-associated protein 1 yes yes 1 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 68.295 68.271 2 1.4886E-73 85172 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 191.53 157.64 28852000 0 0 0 2947200 1930900 3341700 0 0 3281200 4283400 0 4948400 5224400 2895200 0 4862 3756 4405 42145;42146;42147;42148;42149;42150;42151;42152;42153 33330;33331;33332;33333;33334 33330 5 ASSEGGTAAGAGLDSLHK Unmodified 1627.7802 0.7801774 256 O15143 ARPC1B Actin-related protein 2/3 complex subunit 1B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.39 5 2 20 1 4 2 1 2 2 1 2 2 1 1 2 2 2 2 37.319 36.195 2;3 2.7465E-06 46531 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.133 80.029 2272800000 45478000 1829600000 36088000 18373000 19425000 24626000 3721300 29046000 20708000 4495600 10503000 57351000 28647000 48271000 96486000 4863 256 4406 42154;42155;42156;42157;42158;42159;42160;42161;42162;42163;42164;42165;42166;42167;42168;42169;42170;42171;42172;42173;42174;42175;42176;42177;42178;42179;42180 33335;33336;33337;33338;33339;33340;33341;33342;33343;33344;33345;33346;33347;33348;33349;33350;33351;33352;33353;33354;33355;33356;33357;33358;33359;33360 33340 26 ASSEGTIPQVQREEPAPEEEEPLLLQRPER Unmodified 3413.7063 0.70629077 4189 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A yes yes 0 0 2 By MS/MS 10 0 1 1 74.226 74.565 4 5.7176E-33 85519 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.425 64.66 12644000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12644000 4864 4189 4407 42181 33361;33362 33362 2 ASSELFSQK Unmodified 995.49238 0.49237523 2057 Q01581 HMGCS1 Hydroxymethylglutaryl-CoA synthase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 36.91 31.238 2 8.3709E-06 40805 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 155.75 90.996 434850000 11490000 423360000 0 0 0 0 0 0 0 0 0 0 0 0 0 4865 2057 4408 42182;42183;42184 33363;33364 33363 2 ASSFSGISVLTR Unmodified 1223.651 0.65100113 2482 Q15032 R3HDM1 R3H domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 74.182 74.251 2 0.00067277 85019 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.143 60.601 30046000 0 0 0 2868700 0 0 3605600 0 0 0 6423200 0 4017500 4083100 9048200 4866 2482 4409 42185;42186;42187;42188;42189;42190;42191;42192 33365;33366;33367;33368;33369;33370;33371;33372 33367 8 ASSGLLYPLER Unmodified 1204.6452 0.64518747 2163 Q08945 SSRP1 FACT complex subunit SSRP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.374 73.442 2 0.00031039 83770 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.85 72.11 342770000 0 0 0 18160000 15022000 29003000 25188000 22242000 17331000 30036000 40305000 34705000 33772000 26404000 50599000 4867 2163 4410 42193;42194;42195;42196;42197;42198;42199;42200;42201;42202;42203;42204 33373;33374;33375;33376;33377;33378;33379;33380;33381;33382;33383;33384;33385 33377 13 ASSHSSQTQGGGSVTK Unmodified 1517.707 0.70701246 757 P02545 LMNA Prelamin-A/C;Lamin-A/C yes yes 0 0 0 By MS/MS 2 0 1 1 5.6827 2.4424 3 0.00021602 4430 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.134 56.104 126420000 0 126420000 0 0 0 0 0 0 0 0 0 0 0 0 0 4868 757 4411 42205 33386 33386 1 ASSIIDELFQDR Unmodified 1392.6885 0.68850885 931 P10909 CLU Clusterin;Clusterin beta chain;Clusterin alpha chain yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 90.358 90.476 2 0.014734 105035 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 51.927 33.487 3861300 0 0 0 0 0 0 0 0 0 2533000 0 1328300 0 0 0 4869 931 4412 42206;42207 33387 33387 1 ASSIPGYNRTDSVIR Unmodified 1634.8376 0.8376327 4290 Q9C0E2 XPO4 Exportin-4 yes yes 0 0 1 By MS/MS By matching 10 0 2 1 1 48.545 48.923 3 0.041605 55064 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 26.771 19.554 15133000 0 0 0 0 0 0 0 0 0 0 7142300 0 7991100 0 0 4870 4290 4413 42208;42209 33388 33388 1 ASSLDAHEETISIEK Unmodified 1628.7893 0.78934511 3524 Q8TF05 PPP4R1 Serine/threonine-protein phosphatase 4 regulatory subunit 1 yes yes 0 0 0 By MS/MS 3 0 1 1 51.868 46.973 3 0.024548 58276 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 45.115 24.162 3353300 0 3353300 0 0 0 0 0 0 0 0 0 0 0 0 0 4871 3524 4414 42210 33389 33389 1 ASSLDDLR Unmodified 875.43486 0.43486035 3941 Q96P11 NSUN5 Probable 28S rRNA (cytosine-C(5))-methyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.105 32.292 2 0.0043522 34094 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 111.01 37.969 283100000 0 0 0 15205000 22162000 20350000 17551000 17040000 19321000 24521000 34090000 40067000 23816000 20587000 28387000 4872 3941 4415 42211;42212;42213;42214;42215;42216;42217;42218;42219;42220;42221;42222 33390;33391;33392;33393;33394;33395;33396;33397;33398;33399;33400 33395 8 ASSLDSAVPIAPPPR Unmodified 1476.7936 0.79364262 3112 Q7Z6J0 SH3RF1 E3 ubiquitin-protein ligase SH3RF1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 13 1 1 1 1 1 1 1 1 1 1 2 1 68.206 68.291 2;3 0.0020191 77454 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 69.346 59.458 51178000 0 0 0 2103200 2820700 2805100 3382000 3175600 2336400 4489500 4300200 4768500 4051200 11923000 5022800 4873 3112 4416 42223;42224;42225;42226;42227;42228;42229;42230;42231;42232;42233;42234;42235 33401;33402 33402 2 ASSLGEIDESSELR Unmodified 1491.7053 0.70528113 2604 Q16513 PKN2 Serine/threonine-protein kinase N2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.669 56.791 2 1.1361E-07 65049 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 100.55 84.3 307120000 0 0 0 16624000 14792000 35631000 25395000 16302000 17438000 23792000 34157000 27531000 33652000 24865000 36939000 4874 2604 4417 42236;42237;42238;42239;42240;42241;42242;42243;42244;42245;42246;42247 33403;33404;33405;33406;33407;33408;33409;33410;33411;33412;33413;33414;33415 33415 13 ASSLIEEAK Unmodified 946.49713 0.49712625 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 31.697 30.98 2 0.0032866 33072 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 93.267 37.365 424450000 787470 16418000 8220900 18804000 15494000 52950000 28529000 15722000 19295000 47693000 32549000 38057000 37370000 33277000 59279000 4875 5187 4418 42248;42249;42250;42251;42252;42253;42254;42255;42256;42257;42258;42259;42260;42261;42262;42263;42264 33416;33417;33418;33419;33420;33421;33422;33423;33424;33425;33426;33427;33428;33429;33430;33431;33432;33433 33429 17 ASSLIEEAKK Unmodified 1074.5921 0.59208927 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 28.148 24.446 2 0.042778 32384 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.325 38.072 19430000 0 15714000 3715200 0 0 0 0 0 0 0 0 0 0 0 0 4876 5187 4419 42265;42266 33434 33434 1 ASSLISLLK Unmodified 930.57498 0.57498264 1974 P78344 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 3 24 1 1 1 2 2 2 2 2 2 2 2 2 2 2 2 81.603 81.086 1;2 0.00355 93558 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 89.698 42.863 1937000000 68510000 37398000 10670000 86811000 107560000 152150000 112080000 168300000 112240000 162540000 148190000 189410000 133880000 178700000 268570000 4877 1974 4420 42267;42268;42269;42270;42271;42272;42273;42274;42275;42276;42277;42278;42279;42280;42281;42282;42283;42284;42285;42286;42287;42288;42289;42290;42291;42292;42293 33435;33436;33437;33438;33439;33440;33441;33442;33443;33444;33445;33446;33447;33448;33449;33450;33451;33452;33453;33454;33455 33452 14 ASSLNEDPEGSRITYVK Acetyl (Protein N-term) 1906.9272 0.92723557 5217 Q9Y530 OARD1 O-acetyl-ADP-ribose deacetylase 1 yes yes 1 0 1 By MS/MS 2.5 0.5 1 1 2 65.89 60.567 2 1.0435E-80 77302 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 192.15 164.67 119380000 0 119380000 0 0 0 0 0 0 0 0 0 0 0 0 0 4878 5217 4421 42294;42295 33456;33457 33456 2 ASSLPGSLQR Unmodified 1014.5458 0.54580778 456 O75122 CLASP2 CLIP-associating protein 2 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 36.782 36.92 2 0.0067887 40997 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 64.04 39.117 106430000 0 0 0 7432200 8455200 8341100 0 8169300 7652800 15508000 12478000 0 14775000 10780000 12843000 4879 456 4422 42296;42297;42298;42299;42300;42301;42302;42303;42304;42305 33458 33458 1 ASSLPSSAPAVK Unmodified 1113.603 0.60298831 2818 Q5VUA4 ZNF318 Zinc finger protein 318 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.626 36.808 2 0.019204 40624 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 41.117 17.689 78424000 0 0 0 6143000 5282300 5560200 6113700 5412400 4691100 5335800 6957200 7733500 8554000 6487100 10154000 4880 2818 4423 42306;42307;42308;42309;42310;42311;42312;42313;42314;42315;42316;42317 33459;33460;33461;33462;33463;33464 33461 6 ASSLSEELK Unmodified 962.49204 0.49204087 4388 Q9H410 DSN1 Kinetochore-associated protein DSN1 homolog yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 33.548 33.273 2 0.0066168 42787 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.06 52.721 94746000 0 40892000 0 0 3513100 0 0 3449500 0 6117600 10388000 9559900 7566600 4048900 9210300 4881 4388 4424 42318;42319;42320;42321;42322;42323;42324;42325;42326 33465;33466 33465 2 ASSLSTYK Unmodified 855.4338 0.43379771 4605 Q9NRL2 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A yes yes 0 0 0 By MS/MS 2 0 1 1 19.235 15.659 2 0.024519 20766 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.191 65.559 20521000 0 20521000 0 0 0 0 0 0 0 0 0 0 0 0 0 4882 4605 4425 42327 33467 33467 1 ASSNQLVTLQEAK Unmodified 1387.7307 0.73070802 2694 Q52LR7 EPC2 Enhancer of polycomb homolog 2 yes yes 0 0 0 By MS/MS 2 0 1 1 54.676 48.87 2 0.01593 63242 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 54.343 42.75 10890000 0 10890000 0 0 0 0 0 0 0 0 0 0 0 0 0 4883 2694 4426 42328 33468 33468 1 ASSPAESSPEDSGYMR Unmodified 1669.689 0.68897914 5203 Q9Y4H2 IRS2 Insulin receptor substrate 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 7 2 1 1 1 1 1 34.99 35.45 2 0.001176 38769 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 53.252 45.365 29899000 0 0 0 0 0 0 4922000 0 0 0 4579000 4594100 0 4187000 11616000 4884 5203 4427 42329;42330;42331;42332;42333;42334;42335 33469;33470;33471;33472 33472 4 ASSPHGLGSPLVASPR Unmodified 1531.8107 0.81068967 3298 Q8IZW8 TNS4 Tensin-4 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 49.072 49.083 3 0.0025664 55367 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 29.618 21.574 56943000 0 0 0 4150400 4466300 8446500 6847600 0 9386300 0 0 0 0 10981000 12664000 4885 3298 4428 42336;42337;42338;42339;42340;42341;42342;42343 33473;33474;33475;33476;33477 33473 5 ASSPSPLTIGTPESQRK Unmodified 1754.9163 0.91627696 4553 Q9NPI6 DCP1A mRNA-decapping enzyme 1A yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 48.535 48.13 3 0.0037928 54254 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 33.872 22.611 37025000 0 0 2528200 2792000 2901100 3839600 3993300 0 4699900 4199300 0 8375400 0 3696100 0 4886 4553 4429 42344;42345;42346;42347;42348;42349;42350;42351;42352;42353 33478;33479;33480;33481;33482 33478 5 ASSQVLSESPSQDSLDAFMSEMK Unmodified 2473.0989 0.098870286 4215 Q9BWU0 SLC4A1AP Kanadaptin yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 92.784 88.437 2;3 2.0085E-96 109800 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 190.82 184.09 165960000 0 165960000 0 0 0 0 0 0 0 0 0 0 0 0 0 4887 4215 4430 42354;42355;42356 33483;33484;33485 33483 3 ASSQVLSESPSQDSLDAFMSEMK 2 Oxidation (M) 2505.0887 0.08869953 4215 Q9BWU0 SLC4A1AP Kanadaptin yes yes 0 2 0 By MS/MS 3 0 1 1 75.876 72.32 3 0.0003233 87071 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 49.125 46.027 6951100 0 6951100 0 0 0 0 0 0 0 0 0 0 0 0 0 4888 4215 4430 42357 33486 33486 5691;5692 1 ASSQVNVEGQSR Unmodified 1260.6058 0.60584185 351 O43665 RGS10 Regulator of G-protein signaling 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 1 2 2 2 2 2 2 2 1 16.914 17.088 2 2.2783E-14 13662 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 153.1 133.32 1126800000 0 0 0 68166000 40810000 124730000 6826600 33624000 101120000 140860000 177180000 198260000 123110000 93790000 18381000 4889 351 4431 42358;42359;42360;42361;42362;42363;42364;42365;42366;42367;42368;42369;42370;42371;42372;42373;42374;42375;42376;42377;42378;42379 33487;33488;33489;33490;33491;33492;33493;33494;33495;33496;33497;33498;33499;33500;33501;33502;33503;33504;33505;33506;33507 33491 21 ASSQVNVEGQSRLNEK Unmodified 1744.8704 0.8703894 351 O43665 RGS10 Regulator of G-protein signaling 10 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 30.113 26.34 3 5.3354E-05 34536 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.463 65.181 39762000 0 24657000 15105000 0 0 0 0 0 0 0 0 0 0 0 0 4890 351 4432 42380;42381 33508;33509;33510 33509 3 ASSRLENLGIPEEELLR Unmodified 1925.0218 0.02180466 2060 Q01658 DR1 Protein Dr1 yes yes 0 0 1 By MS/MS 10 0 1 1 80.29 80.52 3 0.0029238 92759 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 31.818 22.535 10291000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10291000 4891 2060 4433 42382 33511;33512 33512 2 ASSRLPDTGEGPSR Unmodified 1428.6957 0.69571949 2854 Q68CZ2 TNS3 Tensin-3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.233 22.438 3 0.00024113 22954 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.703 45.148 138510000 0 0 0 6174000 8253700 11294000 8598700 8172000 7795100 13623000 21755000 18796000 8814900 10395000 14836000 4892 2854 4434 42383;42384;42385;42386;42387;42388;42389;42390;42391;42392;42393;42394 33513;33514;33515;33516;33517;33518;33519;33520;33521;33522;33523;33524;33525 33522 10 ASSSGAGAAAAAAAANLNAVR Acetyl (Protein N-term) 1812.9078 0.90783753 2166 Q08AG7 MZT1 Mitotic-spindle organizing protein 1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 79.947 80.099 2 6.2305E-98 92725 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 173.72 159.69 107100000 0 0 0 0 0 8336100 11415000 14061000 0 0 15677000 16325000 0 12135000 29149000 4893 2166 4435 42395;42396;42397;42398;42399;42400;42401 33526;33527;33528;33529;33530;33531;33532;33533 33533 4 ASSSGNDDDLTIPR Acetyl (Protein N-term) 1488.6692 0.66922997 2060 Q01658 DR1 Protein Dr1 yes yes 1 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.191 61.291 2 9.0169E-14 68888 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 110.86 110.86 266520000 0 0 0 18414000 18274000 15442000 17460000 26164000 12139000 23324000 35704000 28695000 25652000 19408000 25842000 4894 2060 4436 42402;42403;42404;42405;42406;42407;42408;42409;42410;42411;42412;42413 33534;33535;33536;33537;33538;33539;33540;33541;33542;33543;33544;33545 33542 12 ASSSGNDDDLTIPRAAINK Acetyl (Protein N-term) 1985.9654 0.96541199 2060 Q01658 DR1 Protein Dr1 yes yes 1 0 1 By MS/MS By MS/MS 2 0 2 1 1 71.998 64.97 2 5.9018E-31 83013 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 153.32 153.32 126520000 12083000 114440000 0 0 0 0 0 0 0 0 0 0 0 0 0 4895 2060 4437 42414;42415 33546;33547 33546 2 ASSSILIDESEPTTNIQIR Unmodified 2073.059 0.058978027 5046 Q9UNZ2 NSFL1C NSFL1 cofactor p47 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 6.67 3.74 2 2 5 4 1 1 1 1 1 79.552 77.861 2;3 7.9701E-66 95984 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 180.28 165.59 121890000 0 85325000 0 0 0 0 0 0 0 5667400 9588200 5540200 0 5238200 10530000 4896 5046 4438 42416;42417;42418;42419;42420;42421;42422;42423;42424 33548;33549;33550;33551;33552 33548 5 ASSSLGLQDFDLLR Unmodified 1520.7835 0.78347187 1443 P41743 PRKCI Protein kinase C iota type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 89.273 89.381 2 3.9759E-05 103468 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 105.46 80.024 52037000 0 0 0 0 2024400 4761500 3124300 3503700 3084800 8199900 5376300 5168500 1727100 3651000 11416000 4897 1443 4439 42425;42426;42427;42428;42429;42430;42431;42432;42433;42434;42435 33553;33554;33555;33556;33557;33558;33559;33560;33561;33562;33563;33564 33556 12 ASSSSASSAGALESSLDR Unmodified 1681.7755 0.77548596 2810 Q5VT52 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 50.652 50.366 2 1.1491E-07 56938 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 68.809 53.238 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4898 2810 4440 42436;42437 33565;33566 33565 2 ASSSSASSAGALESSLDRK Unmodified 1809.8704 0.87044898 2810 Q5VT52 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 1 2 1 2 2 2 2 2 2 43.581 43.762 2;3 1.2603E-73 49402 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 166.6 156.68 967450000 0 0 0 47812000 48626000 69674000 11934000 86835000 62908000 101880000 105290000 104840000 138960000 87941000 100760000 4899 2810 4441 42438;42439;42440;42441;42442;42443;42444;42445;42446;42447;42448;42449;42450;42451;42452;42453;42454;42455;42456;42457;42458;42459 33567;33568;33569;33570;33571;33572;33573;33574;33575;33576;33577;33578;33579;33580;33581 33581 13 ASSSTVPLGFHYETK Acetyl (Protein N-term) 1664.8046 0.80460124 4228 Q9BXK5 BCL2L13 Bcl-2-like protein 13 yes yes 1 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 75.917 73.577 2 0.00016085 91377 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.71 92.422 96952000 0 92908000 0 0 0 0 0 0 0 0 0 0 4043900 0 0 4900 4228 4442 42460;42461 33582;33583 33582 2 ASSSVPPATVSAATAGPGPGFGFASK Acetyl (Protein N-term) 2360.1648 0.16484008 3483 Q8TBX8 PIP4K2C Phosphatidylinositol 5-phosphate 4-kinase type-2 gamma yes yes 1 0 0 By MS/MS 1 0 1 1 103.91 109.17 3 9.4371E-05 89389 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 41.562 33.374 6965000 6965000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4901 3483 4443 42462 33584 33584 1 ASSTGSFTAPDPGLK Unmodified 1434.6991 0.69907354 3251 Q8IWZ8 SUGP1 SURP and G-patch domain-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 58.448 52.617 2 0.001186 67711 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.864 50.593 65849000 0 65849000 0 0 0 0 0 0 0 0 0 0 0 0 0 4902 3251 4444 42463 33585;33586 33585 2 ASSTPSSETQEEFVDDFR Unmodified 2030.8705 0.87050855 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 71.918 72.035 2 5.9084E-11 82334 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 108.17 102.56 33631000 0 0 0 0 2785700 3323800 2256800 0 0 3402300 4852400 4357300 3464800 2559500 6628500 4903 1286 4445 42464;42465;42466;42467;42468;42469;42470;42471;42472 33587;33588;33589;33590;33591;33592;33593;33594 33589 8 ASSTPSSETQEEFVDDFRVGER Unmodified 2472.1041 0.10409032 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 74.591 74.767 3 3.0592E-13 85748 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.568 65.122 67271000 0 0 0 0 0 6750700 3249700 0 7268400 8084900 8646200 10130000 0 0 23141000 4904 1286 4446 42473;42474;42475;42476;42477;42478;42479 33595;33596;33597;33598;33599;33600 33597 6 ASSTSLTSTQPTK Unmodified 1307.6569 0.65687437 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 20.373 20.182 2 1.6831E-42 20919 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 177.57 151.19 477900000 5595600 0 0 29216000 25917000 31567000 33900000 38800000 29477000 39176000 42878000 62851000 46047000 35810000 56665000 4905 1364 4447 42480;42481;42482;42483;42484;42485;42486;42487;42488;42489;42490;42491;42492 33601;33602;33603;33604;33605;33606;33607;33608;33609;33610 33602 9 ASSTSPVEISEWLDQK Unmodified 1775.8578 0.85775902 988 P13804 ETFA Electron transfer flavoprotein subunit alpha, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 88.028 84.521 2 0.00089744 104953 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.457 62.737 178540000 0 176880000 1665700 0 0 0 0 0 0 0 0 0 0 0 0 4906 988 4448 42493;42494;42495 33611;33612 33611 2 ASSTSTPEPTR Unmodified 1132.536 0.53603095 3371 Q8N8S7 ENAH Protein enabled homolog yes yes 0 0 0 By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 10.852 10.969 2 0.046362 8592 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 52.579 32.792 37868000 0 0 0 0 3049100 3853000 4121100 2572500 2293900 4465300 0 7612300 5136000 4765200 0 4907 3371 4449 42496;42497;42498;42499;42500;42501;42502;42503;42504 33613;33614;33615 33614 0 ASSTSTPEPTRK Unmodified 1260.631 0.63099397 3371 Q8N8S7 ENAH Protein enabled homolog yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS 5.2 3.92 3 2 1 1 1 1 1 7.8659 4.8281 3 0.015123 7189 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 35.774 28.801 47518000 10473000 32503000 4542300 0 0 0 0 0 0 0 0 0 0 0 0 4908 3371 4450 42505;42506;42507;42508;42509 33616;33617;33618;33619 33616 4 ASSTSTPEPTRKPWER Unmodified 1828.9068 0.9067749 3371 Q8N8S7 ENAH Protein enabled homolog yes yes 0 0 2 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 2 2 1 2 1 1 2 1 2 2 2 30.497 30.671 3;4 0.0023139 32633 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 62.055 51.421 262240000 0 0 0 7859300 15538000 23227000 12789000 28774000 7826300 14966000 37048000 0 33193000 32382000 48641000 4909 3371 4451 42510;42511;42512;42513;42514;42515;42516;42517;42518;42519;42520;42521;42522;42523;42524;42525;42526;42527;42528 33620;33621;33622;33623;33624;33625;33626;33627;33628;33629 33628 9 ASSVGNVADSTEPTK Acetyl (Protein N-term) 1503.7053 0.70528113 271 O15294 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 46.273 46.44 2 2.5248E-215 52147 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 283.35 215.64 443580000 0 0 0 30917000 28992000 28148000 31394000 29150000 25552000 44614000 52957000 49252000 39600000 31161000 51844000 4910 271 4452 42529;42530;42531;42532;42533;42534;42535;42536;42537;42538;42539;42540;42541 33630;33631;33632;33633;33634;33635;33636;33637;33638;33639;33640 33634 11 ASSVGNVADSTEPTKR Acetyl (Protein N-term) 1659.8064 0.80639216 271 O15294 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 1 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 40.758 41.148 2 3.3122E-24 45509 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 123.95 93.556 19501000 0 0 0 0 0 0 3169800 0 0 0 5148400 7892700 0 3289800 0 4911 271 4453 42542;42543;42544;42545;42546;42547 33641;33642;33643;33644;33645 33644 4 ASSVIFGLK Unmodified 920.53312 0.53311783 4322 Q9H0C8 ILKAP Integrin-linked kinase-associated serine/threonine phosphatase 2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.06 3.8 5 1 10 1 3 2 1 1 1 1 1 1 1 1 1 1 69.949 68.233 2 0.004831 90606 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 113.41 74.605 244020000 142400000 22185000 15602000 5797800 0 3123200 3873700 0 4141500 4975700 7857600 9199200 5038300 7080500 12744000 4912 4322 4454 42548;42549;42550;42551;42552;42553;42554;42555;42556;42557;42558;42559;42560;42561;42562;42563 33646;33647;33648;33649;33650;33651;33652 33650 6 ASSVISTAEGTTRR Unmodified 1434.7427 0.74266969 2676 Q3V6T2 CCDC88A Girdin yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 7 1 1 1 1 1 1 1 31.319 31.488 3 0.01303 34469 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 23.481 9.1277 27135000 0 0 0 1778400 0 2567600 3758300 2996700 0 0 0 6622800 3790800 5620400 0 4913 2676 4455 42564;42565;42566;42567;42568;42569;42570 33653;33654 33653 2 ASSVTTFTGEPNTCPR Unmodified 1723.7835 0.78354822 1706 P52943 CRIP2 Cysteine-rich protein 2 yes yes 0 0 0 By MS/MS 10 0 1 1 47.4 48.132 2 0.0012946 53261 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.774 39.908 5824100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5824100 4914 1706 4456 42571 33655 33655 1 ASSVVVSGTPIR Unmodified 1171.6561 0.65608651 1042 P16930 FAH Fumarylacetoacetase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 46.282 46.826 2 0.0022278 51548 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.694 34.027 17004000 0 0 0 0 0 0 0 0 0 0 3869200 3933600 0 2330200 6871300 4915 1042 4457 42572;42573;42574;42575 33656;33657 33656 2 ASSVVYSATK Unmodified 1011.5237 0.52367535 1455 P42356 PI4KA Phosphatidylinositol 4-kinase alpha yes yes 0 0 0 By MS/MS 2 0 1 1 24.491 20.363 2 0.038813 26985 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.201 41.647 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4916 1455 4458 42576 33658 33658 1 ASTALSNEQQAR Unmodified 1274.6215 0.62149192 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.641 14.808 2 9.1044E-207 14337 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 244.55 204.2 912790000 0 0 0 47840000 29925000 52087000 44181000 39596000 44785000 82272000 116430000 114790000 83494000 83633000 173760000 4917 965 4459 42577;42578;42579;42580;42581;42582;42583;42584;42585;42586;42587;42588 33659;33660;33661;33662;33663;33664;33665;33666;33667;33668;33669;33670;33671;33672;33673 33672 15 ASTALSNEQQARR Unmodified 1430.7226 0.72260295 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 11.751 11.845 3 0.012823 10093 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.875 39.32 24590000 0 0 0 2865800 0 0 4402900 0 2915700 0 0 0 7525100 6880600 0 4918 965 4460 42589;42590;42591;42592;42593;42594 33674;33675;33676;33677 33675 4 ASTASPCNNNINAATAVALQEPRK Unmodified 2497.2343 0.23433341 3029 Q71RC2 LARP4 La-related protein 4 yes yes 0 0 1 By MS/MS By matching By matching By MS/MS 10 0 4 1 1 1 1 61.27 61.341 3 0.0014487 69337 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 25.421 20.554 16883000 0 0 0 0 2805700 0 2902200 0 0 0 0 7160800 0 4014000 0 4919 3029 4461 42595;42596;42597;42598 33678 33678 1 ASTEATELLQNIR Unmodified 1444.7522 0.75217174 189 O14578 CIT Citron Rho-interacting kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 76.66 76.58 2 0.0048564 88218 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 60.434 42.695 38376000 0 0 0 0 3776300 18925000 0 0 0 15675000 0 0 0 0 0 4920 189 4462 42599;42600;42601 33679;33680;33681 33679 3 ASTEGVAIQGQQGTR Unmodified 1501.7485 0.74848335 3643 Q92621 NUP205 Nuclear pore complex protein Nup205 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.567 27.764 2 3.5252E-06 29890 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 108.35 88.045 96636000 0 0 0 6172100 5007600 7753800 5146300 5501100 6061900 6975500 10645000 16417000 8885700 6855000 11215000 4921 3643 4463 42602;42603;42604;42605;42606;42607;42608;42609;42610;42611;42612;42613 33682;33683;33684;33685;33686;33687;33688;33689;33690;33691;33692;33693 33682 12 ASTGGHPVVK Unmodified 951.51378 0.51377937 2216 Q12968 NFATC3 Nuclear factor of activated T-cells, cytoplasmic 3 yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 7.5969 4.7306 2 0.033517 6575 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 57.59 27.783 29987000 23156000 0 6831000 0 0 0 0 0 0 0 0 0 0 0 0 4922 2216 4464 42614;42615 33694 33694 1 ASTGPPLIK Unmodified 882.51747 0.51746776 4494 Q9HB19 PLEKHA2 Pleckstrin homology domain-containing family A member 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 37.529 37.695 2 0.01094 41857 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 63.565 38.567 53233000 0 0 0 3417000 3389600 3097800 4083300 4305100 2931300 4794200 5933600 8289000 0 3795600 9196100 4923 4494 4465 42616;42617;42618;42619;42620;42621;42622;42623;42624;42625;42626 33695;33696 33695 2 ASTGSQASDIDEIFGFFNDGEPPTK Acetyl (Protein N-term) 2671.1926 0.19257097 4082 Q9BPY3 FAM118B Protein FAM118B yes yes 1 0 0 By MS/MS 2 0 1 1 100.26 95.542 3 8.2381E-05 118148 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 48.489 45.436 9723300 0 9723300 0 0 0 0 0 0 0 0 0 0 0 0 0 4924 4082 4466 42627 33697 33697 1 ASTMDVTVVLPSGLEK Oxidation (M) 1661.8546 0.8545879 457 O75128 COBL Protein cordon-bleu yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 77.524 77.212 2 0.00077474 89206 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 53.252 40.296 3415400 0 0 0 0 3415400 0 0 0 0 0 0 0 0 0 0 4925 457 4467 42628;42629;42630 33698;33699;33700 33700 586 3 ASTNAMLISAGLPPLK Oxidation (M) 1598.8702 0.87017839 295 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 79.987 80.022 2 2.2387E-05 92418 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 77.26 69.532 58259000 0 0 0 0 6556500 9448800 0 8778700 0 13810000 0 19666000 0 0 0 4926 295 4468 42631;42632;42633;42634;42635 33701;33702;33703 33702 375 2 ASTNAMLISAGLPPLK Unmodified 1582.8753 0.87526376 295 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 85.208 85.344 2 0.013612 98185 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 34.96 28.577 45617000 0 0 0 0 0 2651500 0 4261800 0 5665600 5804500 8061400 0 6231300 12941000 4927 295 4468 42636;42637;42638;42639;42640;42641;42642 33704 33704 1 ASTNIQDTEGNTPLHLACDEERVEEAK Unmodified 3026.3887 0.38872138 549 O75832 PSMD10 26S proteasome non-ATPase regulatory subunit 10 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.91 3.51 6 17 2 2 2 2 2 1 1 2 2 2 1 2 2 66.3 64.887 3;4 4.5695E-66 84174 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.1 115.38 1003400000 120030000 304230000 109090000 0 24112000 44760000 6538600 0 10109000 75533000 80712000 117990000 10921000 23029000 76373000 4928 549 4469 42643;42644;42645;42646;42647;42648;42649;42650;42651;42652;42653;42654;42655;42656;42657;42658;42659;42660;42661;42662;42663;42664;42665 33705;33706;33707;33708;33709;33710;33711;33712;33713;33714;33715;33716;33717;33718;33719;33720;33721;33722;33723;33724;33725 33710 21 ASTNNESSNHSFGSLGSLSDK Unmodified 2137.9512 0.95121849 4967 Q9UKI8 TLK1 Serine/threonine-protein kinase tousled-like 1 yes yes 0 0 0 By MS/MS 2 0 1 1 55.72 51.843 3 0.031426 64854 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 21.901 16.692 2889300 0 0 2889300 0 0 0 0 0 0 0 0 0 0 0 0 4929 4967 4470 42666 33726 33726 1 ASTSTTIR Acetyl (Protein N-term) 877.45051 0.45051041 66;58;779 P04259;CON__P02538;P02538;CON__P04259 KRT6B;KRT6A Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 6A no no 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 24.799 25.053 2 0.001527 26702 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 113.5 89.313 + 1135200000 0 0 0 170150000 0 22578000 83874000 125210000 15978000 58665000 34004000 64440000 505360000 32741000 22211000 4930 779;58;66 4471 42667;42668;42669;42670;42671;42672;42673;42674;42675;42676;42677 33727;33728;33729;33730;33731;33732;33733;33734;33735;33736;33737 33729 11 ASTSTTIRSHSSSR Acetyl (Protein N-term) 1518.7386 0.73864694 66;58;779 P04259;CON__P02538;P02538;CON__P04259 KRT6B;KRT6A Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 6A no no 1 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 15.168 15.404 3 0.0015458 15170 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 50.843 46.129 + 71587000 0 0 0 0 0 0 21528000 0 0 0 0 32692000 0 17368000 0 4931 779;58;66 4472 42678;42679;42680 33738 33738 0 ASVAAMEAK Unmodified 876.4375 0.43750288 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 22.957 18.963 2 0.010776 24776 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.67 42.547 56510000 0 56510000 0 0 0 0 0 0 0 0 0 0 0 0 0 4932 2203 4473 42681;42682 33739 33739 1 ASVAAQQQEEAR Unmodified 1286.6215 0.62149192 3149 Q86UK7 ZNF598 Zinc finger protein 598 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 11.749 11.896 2 1.0182E-07 11093 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 118.03 87.347 129130000 0 0 0 7443700 7270300 9360800 10019000 9727500 10326000 12873000 8086500 13092000 11731000 13747000 15458000 4933 3149 4474 42683;42684;42685;42686;42687;42688;42689;42690;42691;42692;42693;42694 33740;33741;33742;33743;33744;33745;33746;33747;33748;33749;33750;33751 33741 12 ASVAAQQQEEARR Unmodified 1442.7226 0.72260295 3149 Q86UK7 ZNF598 Zinc finger protein 598 yes yes 0 0 1 By MS/MS By MS/MS By matching 10 0 3 1 1 1 10 10.26 3 0.041848 7952 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 29.071 17.152 11440000 0 0 0 0 0 0 0 0 2441100 0 0 0 0 3974400 5024500 4934 3149 4475 42695;42696;42697 33752 33752 1 ASVASEVSTTSSTSKPPTGR Unmodified 1948.9702 0.97016302 2759 Q5SW79 CEP170 Centrosomal protein of 170 kDa yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 33.886 34.104 3 4.7291E-09 36864 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.783 59.474 72169000 0 0 0 0 7381100 0 6915200 0 3635800 6182000 9588700 16029000 14706000 7730000 0 4935 2759 4476 42698;42699;42700;42701;42702;42703;42704;42705;42706 33753;33754;33755;33756;33757;33758;33759;33760;33761 33759 9 ASVASEVSTTSSTSKPPTGRR Unmodified 2105.0713 0.071274048 2759 Q5SW79 CEP170 Centrosomal protein of 170 kDa yes yes 0 0 2 By matching By MS/MS By MS/MS By matching By matching 10 0 5 1 1 1 1 1 28.544 28.73 3 0.0057112 31006 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 42.711 26.405 18891000 0 0 0 0 2084000 0 3275400 0 1742000 0 6058200 0 0 0 5731700 4936 2759 4477 42707;42708;42709;42710;42711 33762;33763 33763 2 ASVAVDPQPSVVTR Acetyl (Protein N-term) 1466.7729 0.77290718 4020 Q99541 PLIN2 Perilipin-2 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.182 68.259 2 2.2116E-19 78481 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 128.17 83.029 272040000 0 0 0 13800000 16619000 16029000 21639000 21820000 14593000 27002000 27993000 39714000 22103000 22466000 28266000 4937 4020 4478 42712;42713;42714;42715;42716;42717;42718;42719;42720;42721;42722;42723 33764;33765;33766;33767;33768;33769;33770;33771;33772;33773;33774;33775;33776;33777;33778 33773 15 ASVDDDDSGWELSMPEK Unmodified 1879.7782 0.77818807 2831 Q5VZE5 NAA35 N-alpha-acetyltransferase 35, NatC auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 2 1 1 1 74.554 74.605 2 2.2583E-31 85979 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 120.14 114.29 61195000 0 0 0 0 3228700 0 0 0 0 12553000 18467000 26946000 0 0 0 4938 2831 4479 42724;42725;42726;42727;42728;42729 33779;33780;33781;33782;33783;33784 33781 6 ASVDDDDSGWELSMPEK Oxidation (M) 1895.7731 0.7731027 2831 Q5VZE5 NAA35 N-alpha-acetyltransferase 35, NatC auxiliary subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 59.74 60.087 2 3.3893E-25 68363 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 108.17 101.94 21326000 0 0 0 0 0 0 0 0 0 4923900 5836100 10566000 0 0 0 4939 2831 4479 42730;42731;42732 33785;33786;33787 33787 4478 3 ASVEDADTQSK Unmodified 1149.515 0.51496116 2317 Q13561 DCTN2 Dynactin subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS 8.79 2.98 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 15.656 15.873 2 2.3746E-09 92540 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 169.41 138.77 173800000 68130000 0 0 6752300 6582700 8144500 6132800 4466900 4682400 8052100 18566000 12066000 9377100 7254100 13593000 4940 2317 4480 42733;42734;42735;42736;42737;42738;42739;42740;42741;42742;42743;42744;42745;42746 33788;33789;33790;33791;33792 33789 5 ASVENLLTEIEILK Unmodified 1570.8818 0.88178893 2949 Q6PHR2 ULK3 Serine/threonine-protein kinase ULK3 yes yes 0 0 0 By MS/MS 2 0 1 1 100.62 95.904 2 0.010984 118594 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 55.04 40.068 9448100 0 9448100 0 0 0 0 0 0 0 0 0 0 0 0 0 4941 2949 4481 42747 33793 33793 1 ASVETGFAK Unmodified 908.46035 0.46034682 4114 Q9BRQ8 AIFM2 Apoptosis-inducing factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.589 27.786 2 0.0052685 29809 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 78.377 41.218 99663000 0 0 0 4757300 6499200 6874300 5594900 8886500 3218200 10799000 11846000 15047000 9791100 7609400 8740800 4942 4114 4482 42748;42749;42750;42751;42752;42753;42754;42755;42756;42757;42758;42759 33794;33795;33796;33797;33798;33799;33800;33801;33802 33795 9 ASVETSPLLR Unmodified 1071.5924 0.59242362 1717 P53602 MVD Diphosphomevalonate decarboxylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 49.934 50.268 2 0.014518 55706 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.305 31.509 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4943 1717 4483 42760;42761;42762;42763 33803;33804;33805;33806 33803 4 ASVGFGGSCFQK Unmodified 1243.5656 0.56555694 425 O60701 UGDH UDP-glucose 6-dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 55.175 48.883 2 0.00042967 66148 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.096 71.796 268020000 182630000 85391000 0 0 0 0 0 0 0 0 0 0 0 0 0 4944 425 4484 42764;42765;42766 33807;33808 33808 2 ASVGMYLISK Unmodified 1067.5685 0.56851706 864 P08243 ASNS Asparagine synthetase [glutamine-hydrolyzing] yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 67.986 68.207 2 0.0097229 77368 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.267 36.708 41951000 0 0 0 0 0 5051500 2040200 2341000 1807200 5058400 4521900 6481700 0 3870600 10779000 4945 864 4485 42767;42768;42769;42770;42771;42772;42773;42774;42775 33809;33810 33809 2 ASVILAGLGFTPK Unmodified 1272.7442 0.74417324 4653 Q9NUQ8 ABCF3 ATP-binding cassette sub-family F member 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 86.041 86.109 2 3.2234E-30 99634 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 153.12 124.2 195830000 0 0 0 4956900 8190200 18755000 13527000 14960000 13962000 22118000 17137000 27673000 12902000 9510600 32140000 4946 4653 4486 42776;42777;42778;42779;42780;42781;42782;42783;42784;42785;42786;42787 33811;33812;33813;33814;33815;33816;33817;33818;33819;33820;33821;33822;33823 33814 7 ASVIPTLQDLSSSK Unmodified 1444.7773 0.77732386 2433 Q14686 NCOA6 Nuclear receptor coactivator 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 80.487 79.924 2 0.0017479 92191 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 55.401 32.759 156220000 0 40466000 0 5210500 7327200 0 7725300 9620800 8401800 11738000 11129000 13728000 10438000 13188000 17243000 4947 2433 4487 42788;42789;42790;42791;42792;42793;42794;42795;42796;42797;42798;42799;42800 33824;33825;33826;33827;33828;33829;33830;33831;33832;33833;33834;33835 33825 11 ASVITQVFHVPLEER Unmodified 1723.9257 0.92571943 2033 Q00341 HDLBP Vigilin yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 84.384 84.524 3 0.0001815 97906 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 56.514 45.856 69826000 0 0 0 0 0 10587000 3117400 4189600 5380300 7373600 5464200 4484500 2506700 5107500 21615000 4948 2033 4488 42801;42802;42803;42804;42805;42806;42807;42808;42809;42810 33836;33837;33838;33839;33840;33841;33842;33843 33837 8 ASVITQVFHVPLEERK Unmodified 1852.0207 0.020682448 2033 Q00341 HDLBP Vigilin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 79.04 79.181 3 5.933E-05 91046 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.11 55.23 33491000 0 0 0 0 0 5057800 0 0 6842200 0 0 0 0 0 21591000 4949 2033 4489 42811;42812;42813 33844;33845;33846 33845 3 ASVLDTSMSAGSGSPSK Unmodified 1580.7352 0.73520105 5054 Q9UPQ0 LIMCH1 LIM and calponin homology domains-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 46.129 45.847 2 1.5074E-38 52376 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 142.91 123.15 232470000 0 13430000 0 11224000 13843000 16749000 14232000 14614000 12195000 18074000 20020000 27628000 20126000 19975000 30357000 4950 5054 4490 42814;42815;42816;42817;42818;42819;42820;42821;42822;42823;42824;42825;42826 33847;33848;33849;33850;33851;33852;33853;33854;33855;33856;33857;33858;33859;33860 33859 13 ASVLDTSMSAGSGSPSK Oxidation (M) 1596.7301 0.73011567 5054 Q9UPQ0 LIMCH1 LIM and calponin homology domains-containing protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 2 1 1 1 2 2 2 2 2 2 1 1 30.484 30.693 2 2.2052E-18 33181 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 98.531 83.265 162190000 0 0 0 14729000 5066700 7899600 8600000 12476000 6374900 18535000 18056000 28545000 24886000 7501800 9516900 4951 5054 4490 42827;42828;42829;42830;42831;42832;42833;42834;42835;42836;42837;42838;42839;42840;42841;42842;42843;42844;42845 33861;33862;33863;33864;33865;33866;33867;33868;33869;33870;33871;33872;33873 33864 6402 11 ASVLFANEK Unmodified 977.5182 0.51819605 1273 P30260 CDC27 Cell division cycle protein 27 homolog yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 44.131 44.252 2 0.0033621 48756 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 131.41 84.327 232060000 0 0 0 20857000 22537000 0 26067000 25028000 0 0 36341000 32574000 37279000 31379000 0 4952 1273 4491 42846;42847;42848;42849;42850;42851;42852;42853 33874;33875;33876;33877;33878;33879;33880;33881 33881 8 ASVLLGSR Unmodified 801.47085 0.47085192 3311 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.036 34.219 2 0.0076382 37308 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 88.954 32.413 253200000 0 0 0 10010000 13095000 18257000 24469000 18941000 13093000 21594000 27784000 35868000 22920000 17322000 29850000 4953 3311 4492 42854;42855;42856;42857;42858;42859;42860;42861;42862;42863;42864;42865 33882;33883;33884;33885;33886;33887;33888 33886 7 ASVLQQLDRVDETPGPPHPK Unmodified 2183.1335 0.13348037 656 O95402 MED26 Mediator of RNA polymerase II transcription subunit 26 yes yes 0 0 1 By MS/MS 2 0 1 1 78.359 70.228 4 0.00055637 92418 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 39.585 33.469 8413900 8413900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4954 656 4493 42866 33889 33889 1 ASVMLFMK Unmodified 925.47653 0.47653093 570 O76003 GLRX3 Glutaredoxin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 76.663 75.56 2 0.020877 97658 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.265 50.373 149310000 76632000 9897100 7433000 0 1864000 6361500 0 2420800 2071200 5444000 5740300 5407800 2705300 4860700 18469000 4955 570 4494 42867;42868;42869;42870;42871;42872;42873;42874;42875;42876;42877;42878;42879 33890;33891;33892;33893 33891 4 ASVMLFMK 2 Oxidation (M) 957.46636 0.46636017 570 O76003 GLRX3 Glutaredoxin-3 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS 4.83 3.67 3 1 2 1 2 1 2 55.093 49.396 2 0.023918 67059 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.674 36.988 137850000 64948000 52186000 20712000 0 0 0 0 0 0 0 0 0 0 0 0 4956 570 4494 42880;42881;42882;42883;42884;42885 33894;33895;33896;33897;33898 33898 728 2 ASVMLFMK Oxidation (M) 941.47145 0.47144555 570 O76003 GLRX3 Glutaredoxin-3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 2 1 2 2 2 2 63.038 61.883 2 0.0075761 79506 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 114.72 79.829 122220000 34630000 18124000 4765300 0 0 6140700 3623100 0 0 14188000 12544000 0 0 7196800 21013000 4957 570 4494 42886;42887;42888;42889;42890;42891;42892;42893;42894;42895;42896;42897;42898;42899 33899;33900;33901;33902;33903;33904;33905;33906;33907 33906 728 9 ASVNSETESSFNINENTTASGTGLSEK Unmodified 2773.2526 0.25260505 296 O43148 RNMT mRNA cap guanine-N7 methyltransferase yes yes 0 0 0 By MS/MS 2 0 1 1 69.038 60.743 3 4.5834E-06 81182 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 25.72 13.867 6306400 6306400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4958 296 4495 42900 33908 33908 1 ASVPAAPNPAATSATSVHVR Unmodified 1902.9912 0.99117323 3271 Q8IY33 MICALL2 MICAL-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 52.765 52.94 3 0.015812 59829 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 25.544 16.752 27602000 0 0 0 0 0 0 0 4196700 0 12897000 0 0 0 10508000 0 4959 3271 4496 42901;42902;42903 33909 33909 1 ASVPPTDK Unmodified 813.42323 0.42323303 1856 P61758 VBP1 Prefoldin subunit 3 yes yes 0 0 0 By MS/MS 1 0 1 1 107.17 108.06 2 0.024425 100212 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 81.296 50.007 15777000 0 15777000 0 0 0 0 0 0 0 0 0 0 0 0 0 4960 1856 4497 42904 33910 33910 1 ASVPREPGGPSPR Unmodified 1305.6789 0.67894722 248 O15067 PFAS Phosphoribosylformylglycinamidine synthase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.313 23.518 3 0.0028576 24260 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 74.678 56.87 254850000 0 0 0 9055800 8602400 8637900 9144900 7260500 6333400 17224000 32712000 32308000 17976000 34575000 71024000 4961 248 4498 42905;42906;42907;42908;42909;42910;42911;42912;42913;42914;42915;42916 33911;33912;33913;33914;33915;33916;33917;33918 33914 4 ASVPSVQIQGQR Unmodified 1268.6837 0.68369824 3208 Q86YP4 GATAD2A Transcriptional repressor p66-alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 45.628 45.794 2 0.0031554 50377 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.161 42.067 49652000 0 0 0 3872300 4618400 0 3839400 5487400 0 0 6130900 9162400 0 6162100 10379000 4962 3208 4499 42917;42918;42919;42920;42921;42922;42923;42924;42925 33919;33920;33921;33922;33923;33924;33925;33926;33927 33920 9 ASVPTIQDQASAMQLSQCAK Unmodified 2133.0194 0.019438173 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 1 2 2 2 1 2 2 2 2 2 2 70.941 71.067 2;3 2.1657E-11 81188 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.009 43.971 150610000 0 0 0 3954100 2391600 16110000 5579000 7033800 1846800 17236000 17744000 23433000 11398000 12368000 31516000 4963 5187 4500 42926;42927;42928;42929;42930;42931;42932;42933;42934;42935;42936;42937;42938;42939;42940;42941;42942;42943;42944;42945;42946 33928;33929;33930;33931;33932;33933;33934;33935;33936;33937;33938;33939;33940;33941 33932 13 ASVPTIQDQASAMQLSQCAK Oxidation (M) 2149.0144 0.014352795 5187 Q9Y490 TLN1 Talin-1 yes yes 0 1 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching 10 0 11 1 1 1 2 1 2 1 1 1 59.81 60.076 2;3 8.378E-12 68524 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 83.729 68.527 77324000 0 0 0 0 0 6809400 4970500 0 2928300 22002000 4906900 21468000 5038000 3344000 5857400 4964 5187 4500 42947;42948;42949;42950;42951;42952;42953;42954;42955;42956;42957 33942;33943;33944;33945 33943 6560 4 ASVRAAEAMTKR Oxidation (M) 1305.6823 0.68231804 5404 yes yes 0 1 2 By MS/MS 10 0 1 1 23.364 23.531 3 0.018889 24629 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 47.288 7.7789 + 7260500 0 0 0 0 0 0 0 7260500 0 0 0 0 0 0 0 4965 5404 4501 42958 33946 33946 6774 1 ASVSELACIYSALILHDDEVTVTEDK Acetyl (Protein N-term) 2919.4059 0.40593457 806 P05386 RPLP1 60S acidic ribosomal protein P1 yes yes 1 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 103.3 98.944 2;3 2.7187E-92 122246 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 141.5 124.43 242980000 2149900 240830000 0 0 0 0 0 0 0 0 0 0 0 0 0 4966 806 4502 42959;42960;42961 33947;33948 33947 2 ASVSITFDNSDK Unmodified 1282.6041 0.60411052 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 57.938 52.107 2 2.7749E-05 67540 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.4 76.733 50278000 0 50278000 0 0 0 0 0 0 0 0 0 0 0 0 0 4967 643 4503 42962;42963 33949;33950;33951;33952 33951 4 ASVSQTSPQSASSPR Unmodified 1488.7168 0.71684887 3509 Q8TDY2 RB1CC1 RB1-inducible coiled-coil protein 1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 17.132 17.275 2 0.033006 17362 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 30.331 23.306 8395100 0 0 0 0 807100 1535200 0 1150200 0 1390000 2013000 0 1499700 0 0 4968 3509 4504 42964;42965;42966;42967;42968;42969 33953;33954 33953 2 ASVSQVEADLK Unmodified 1145.5928 0.59281755 2135 Q07065 CKAP4 Cytoskeleton-associated protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 51.168 51.209 2 0.0045367 58474 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 73.885 48.326 116280000 0 0 0 14857000 15306000 0 9985200 14688000 0 0 0 32942000 14243000 14256000 0 4969 2135 4505 42970;42971;42972;42973;42974;42975;42976 33955;33956;33957;33958;33959;33960;33961;33962 33962 8 ASVTIQAR Unmodified 844.47667 0.47666558 2598 Q16204 CCDC6 Coiled-coil domain-containing protein 6 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.598 22.804 2 0.018652 22525 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 64.265 29.159 127740000 0 0 0 4415500 3508000 6412800 6259100 5282600 4709700 10282000 15542000 25477000 9942200 13342000 22564000 4970 2598 4506 42977;42978;42979;42980;42981;42982;42983;42984;42985;42986;42987;42988 33963;33964;33965;33966 33964 3 ASVTLSEAEK Acetyl (Protein N-term) 1075.5397 0.53971935 2478 Q15024 EXOSC7 Exosome complex component RRP42 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 51.811 52.064 2 0.0022329 57799 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.734 46.638 76814000 0 0 0 0 0 7583500 4519300 5544400 5505200 8833100 14294000 0 9217700 0 21317000 4971 2478 4507 42989;42990;42991;42992;42993;42994;42995;42996 33967;33968;33969;33970;33971;33972;33973;33974 33970 8 ASVVDGTPLVAAPSLNATTVVTTVYQEPIMSQGAALSGEPTTLTK Unmodified 4485.32 0.32002668 405 O60502 MGEA5 Protein O-GlcNAcase yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 98.32 94.299 4 8.1785E-05 113150 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 25.784 24.55 21996000 0 21996000 0 0 0 0 0 0 0 0 0 0 0 0 0 4972 405 4508 42997;42998 33975 33975 1 ASVVPLPYER Unmodified 1129.6132 0.61315906 4904 Q9UHL9 GTF2IRD1 General transcription factor II-I repeat domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 66.569 66.682 2 0.010197 76538 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 56.432 24.497 35099000 0 0 0 0 0 8344000 0 7209900 7321100 0 0 0 12224000 0 0 4973 4904 4509 42999;43000;43001;43002 33976;33977 33977 2 ASVVSREK Unmodified 874.48723 0.48723027 2397 Q14241 TCEB3 Transcription elongation factor B polypeptide 3 yes yes 0 0 1 By MS/MS By matching 2 0 2 1 1 6.5489 3.724 2 0.042153 6447 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 138.78 57.001 143060000 134040000 0 9017000 0 0 0 0 0 0 0 0 0 0 0 0 4974 2397 4510 43003;43004 33978 33978 1 ASWESLDEEWRAPQAGSR Unmodified 2073.9504 0.95043063 2039 Q00587 CDC42EP1 Cdc42 effector protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 74.781 74.969 3 0.00010167 85979 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.648 56.439 49836000 0 0 0 0 0 0 0 10372000 0 0 7580400 0 6500200 6185000 19198000 4975 2039 4511 43005;43006;43007;43008;43009 33979;33980;33981;33982;33983;33984 33979 6 ASWSSLSMDEK Oxidation (M) 1255.5391 0.53906742 977 P13073 COX4I1 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 48.117 42.855 2 0.014136 55605 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 61.765 40.818 22515000 0 22515000 0 0 0 0 0 0 0 0 0 0 0 0 0 4976 977 4512 43010;43011 33985 33985 1303 1 ASWSSLSMDEK Unmodified 1239.5442 0.5441528 977 P13073 COX4I1 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 62.206 56.868 2 0.010112 73110 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.379 63.376 26377000 0 26377000 0 0 0 0 0 0 0 0 0 0 0 0 0 4977 977 4512 43012;43013 33986 33986 1 ASWTVQESK Unmodified 1034.5033 0.50327426 2838 Q63HN8 RNF213 E3 ubiquitin-protein ligase RNF213 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 33.184 28.623 2 0.0072799 37599 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.72 64.88 29548000 0 29548000 0 0 0 0 0 0 0 0 0 0 0 0 0 4978 2838 4513 43014;43015 33987 33987 1 ASYAEQLSMLK Unmodified 1239.6169 0.61692381 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 70.126 70.316 2 0.0013097 80972 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 89.047 64.153 46054000 0 0 0 0 0 4343800 3252500 4633100 3604900 4642100 0 7845700 4107400 5421000 8203400 4979 2459 4514 43016;43017;43018;43019;43020;43021;43022;43023;43024 33988;33989;33990;33991;33992;33993;33994 33989 7 ASYAEQLSMLK Oxidation (M) 1255.6118 0.61183843 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By matching 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 61.327 60.688 2 0.0086751 69128 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 46.819 37.874 47429000 0 27745000 0 1424400 2095600 2389100 3323700 2191400 0 0 3190600 3058800 0 2010200 0 4980 2459 4514 43025;43026;43027;43028;43029;43030;43031;43032;43033 33995;33996;33997 33995 4048 3 ASYAVSETIPK Unmodified 1164.6027 0.60265396 4578 Q9NQW7 XPNPEP1 Xaa-Pro aminopeptidase 1 yes yes 0 0 0 By MS/MS 2 0 1 1 55.105 46.997 2 0.024215 64464 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.04 42.74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4981 4578 4515 43034 33998 33998 1 ASYDTLCVLDGDK Unmodified 1455.6552 0.65515981 3701 Q93008 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.5 3.55 1 1 4 2 1 1 1 1 71.288 69.963 2 0.00029441 87486 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.9 104.23 348410000 0 334060000 0 0 0 0 0 0 2605500 0 0 0 2267200 4087800 5388500 4982 3701 4516 43035;43036;43037;43038;43039;43040 33999;34000;34001;34002 33999 4 ASYDVSDSGQLEHVQPWSV Unmodified 2102.9545 0.95451296 2064 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 81.577 80.459 2 0 98893 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 315.43 306.91 1147100000 11870000 760930000 4149600 4245600 21388000 27122000 14250000 26308000 25892000 51574000 42775000 43565000 18157000 29632000 65191000 4983 2064 4517 43041;43042;43043;43044;43045;43046;43047;43048;43049;43050;43051;43052;43053;43054;43055;43056 34003;34004;34005;34006;34007;34008;34009;34010;34011;34012;34013;34014;34015;34016;34017 34006 15 ASYFICHDQETIK Unmodified 1610.7399 0.73989249 3844 Q96G03 PGM2 Phosphoglucomutase-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 2 2 2 56.096 50.278 2;3 0.0043118 62648 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 70.628 64.733 105940000 35664000 20270000 50006000 0 0 0 0 0 0 0 0 0 0 0 0 4984 3844 4518 43057;43058;43059;43060;43061;43062 34018;34019;34020;34021 34021 2 ASYFICHDQETIKK Unmodified 1738.8349 0.83485551 3844 Q96G03 PGM2 Phosphoglucomutase-2 yes yes 0 0 1 By MS/MS 2 0 1 1 49.378 41.553 3 0.021972 57528 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 37.657 29.091 17503000 17503000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4985 3844 4519 43063 34022 34022 0 ASYGQGLQQSR Unmodified 1193.5789 0.57889882 1187 P25391 LAMA1 Laminin subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 21.965 22.198 2 0.013583 22899 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 46.406 30.073 24304000 0 0 0 0 0 0 2013100 2437600 3099600 4608500 5107400 0 4115400 2922500 0 4986 1187 4520 43064;43065;43066;43067;43068;43069;43070 34023 34023 1 ASYILMEK Unmodified 953.4892 0.4892041 1547 P48637 GSS Glutathione synthetase yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 51.093 51.654 2 0.023317 57302 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.436 38.305 16467000 0 0 0 0 0 0 0 0 0 0 5059500 0 0 0 11407000 4987 1547 4521 43071;43072 34024 34024 1 ASYISSAR Unmodified 853.42938 0.42938104 2672 Q3LXA3 DAK Bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase (cyclizing);ATP-dependent dihydroxyacetone kinase;FAD-AMP lyase (cyclizing) yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 18.544 18.745 2 0.041524 17797 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.933 28.162 32184000 0 0 0 1429000 986120 2725600 1661400 0 0 1842100 3910700 4747300 1938700 3394700 9548300 4988 2672 4522 43073;43074;43075;43076;43077;43078;43079;43080;43081;43082 34025;34026 34025 2 ASYVAPLTAQPATYR Unmodified 1607.8308 0.83075641 3948 Q96PK6 RBM14 RNA-binding protein 14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 64.834 64.992 2 0.0012694 74408 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 57.019 50.046 53316000 0 0 0 0 2514400 4771600 2920700 4183800 3186900 5183500 5036900 6186000 0 7564500 11768000 4989 3948 4523 43083;43084;43085;43086;43087;43088;43089;43090;43091;43092;43093 34027;34028;34029;34030;34031;34032;34033;34034;34035;34036;34037 34033 11 ASYVASTK Unmodified 825.42323 0.42323303 1340;1200 P35221;P26232 CTNNA1;CTNNA2 Catenin alpha-1;Catenin alpha-2 no no 0 0 0 By MS/MS 2 0 1 1 11.54 8.2618 1 0.035175 11355 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.61 54.169 20901000 0 20901000 0 0 0 0 0 0 0 0 0 0 0 0 0 4990 1340;1200 4524 43094 34038 34038 0 ATAADSLFDR Unmodified 1065.5091 0.50908792 2830 Q5VZ89 DENND4C DENN domain-containing protein 4C yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 2 1 1 1 1 1 1 52.94 52.844 2 0.010972 59584 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 55.064 35.576 75698000 0 0 0 8293800 11371000 1538100 8618900 11201000 9335300 13453000 0 0 0 11887000 0 4991 2830 4525 43095;43096;43097;43098;43099;43100;43101;43102;43103 34039;34040;34041;34042;34043;34044 34040 4 ATAADSLFDRQGFLK Unmodified 1638.8366 0.83657007 2830 Q5VZ89 DENND4C DENN domain-containing protein 4C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 77.415 76.815 3 2.3714E-06 88359 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.633 65.537 71579000 12762000 0 0 0 0 5937900 3903200 6914700 5175500 4732000 3608600 6984100 4399900 5125000 12035000 4992 2830 4526 43104;43105;43106;43107;43108;43109;43110;43111;43112;43113;43114 34045;34046;34047;34048;34049;34050;34051;34052;34053 34048 9 ATAAELLK Unmodified 815.47527 0.4752686 714 O96013 PAK4 Serine/threonine-protein kinase PAK 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 39.211 39.269 2 0.033162 43898 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 53.878 17.309 54423000 0 0 0 4820700 4144100 7823000 5924300 0 4173500 8299100 7258100 0 6195200 5785200 0 4993 714 4527 43115;43116;43117;43118;43119;43120;43121;43122;43123 34054 34054 1 ATAAETSASEPEAESK Acetyl (Protein N-term) 1619.7162 0.71623974 2475 Q15020 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 33.844 33.525 2 8.4465E-51 36788 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 169.89 163.36 300240000 6680300 0 0 12021000 12586000 17129000 16968000 17344000 12355000 24202000 45063000 39080000 30296000 36226000 30288000 4994 2475 4528 43124;43125;43126;43127;43128;43129;43130;43131;43132;43133;43134;43135;43136 34055;34056;34057;34058;34059;34060;34061;34062;34063;34064;34065;34066;34067 34065 13 ATAAFSNVGTAISK Unmodified 1336.6987 0.69867961 2642 Q16890 TPD52L1 Tumor protein D53 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.65 3.65 5 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 56.493 55.533 2 5.0745E-40 62041 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 201.46 181.17 2294400000 32710000 495880000 4833700 78356000 105360000 107160000 119320000 138650000 104830000 150450000 190400000 291480000 146600000 114410000 213970000 4995 2642 4529 43137;43138;43139;43140;43141;43142;43143;43144;43145;43146;43147;43148;43149;43150;43151;43152;43153 34068;34069;34070;34071;34072;34073;34074;34075;34076;34077;34078;34079;34080;34081;34082;34083;34084;34085;34086;34087;34088 34075 20 ATAATEEPFPFHGLLPK Acetyl (Protein N-term) 1866.9516 0.95159983 1243 P29144 TPP2 Tripeptidyl-peptidase 2 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 92.798 91.645 2 4.7086E-118 113942 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 218.15 173.73 845170000 0 790370000 30649000 0 0 1361500 0 0 0 0 0 4842200 0 3363000 14579000 4996 1243 4530 43154;43155;43156;43157;43158;43159 34089;34090;34091 34089 3 ATAATSPALK Acetyl (Protein N-term) 971.52876 0.52876073 3532 Q8WTW3 COG1 Conserved oligomeric Golgi complex subunit 1 yes yes 1 0 0 By MS/MS By MS/MS 10 0 2 1 1 39.711 40.253 2 0.042715 43809 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.048 13.224 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4997 3532 4531 43160;43161 34092;34093 34092 2 ATAAYEQLK Acetyl (Protein N-term) 1035.5237 0.52367535 4635 Q9NTJ5 SACM1L Phosphatidylinositide phosphatase SAC1 yes yes 1 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 56.902 57.135 2 0.0071193 64698 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 51.749 36.884 42398000 0 0 0 0 0 5046000 3752500 0 4665900 5199400 7203300 10498000 0 6032200 0 4998 4635 4532 43162;43163;43164;43165;43166;43167;43168 34094;34095;34096;34097;34098 34095 5 ATAEDFNK Unmodified 894.40831 0.40831125 3895 Q96JJ3 ELMO2 Engulfment and cell motility protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 13.595 13.706 2 0.0099634 12919 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 81.191 62.408 16948000 0 0 0 2041400 0 3393700 1777200 1854900 1550100 0 0 3198700 3132500 0 0 4999 3895 4533 43169;43170;43171;43172;43173;43174;43175 34099;34100 34100 2 ATAEEMTK Unmodified 879.40078 0.40078303 3658 Q92769 HDAC2 Histone deacetylase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 9.4272 5.9124 2 0.032465 10056 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.75 65.928 73371000 20965000 52406000 0 0 0 0 0 0 0 0 0 0 0 0 0 5000 3658 4534 43176;43177;43178 34101;34102 34101 1 ATAEQISSQTGNK Unmodified 1333.6474 0.64737232 2628 Q16698 DECR1 2,4-dienoyl-CoA reductase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 15.574 15.705 2 0.00013053 14447 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.55 55.393 17479000 0 0 0 0 1716700 1927200 0 0 1835100 0 0 0 0 4309300 7690700 5001 2628 4535 43179;43180;43181;43182;43183;43184 34103;34104 34103 2 ATAEVLNIGK Acetyl (Protein N-term) 1056.5815 0.58152458 1135 P22234 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.82 3.58 2 5 2 24 4 4 1 2 2 2 2 2 2 2 2 2 2 2 2 78.25 77.873 1;2 1.5551E-13 90198 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 183.65 138.57 4584700000 1870600000 297250000 3381700 81753000 77721000 132470000 121610000 110020000 89082000 167870000 297860000 374900000 113100000 242110000 605000000 5002 1135 4536 43185;43186;43187;43188;43189;43190;43191;43192;43193;43194;43195;43196;43197;43198;43199;43200;43201;43202;43203;43204;43205;43206;43207;43208;43209;43210;43211;43212;43213;43214;43215;43216;43217 34105;34106;34107;34108;34109;34110;34111;34112;34113;34114;34115;34116;34117;34118;34119;34120;34121;34122;34123;34124;34125;34126;34127;34128;34129 34120 21 ATAEVLNIGKK Acetyl (Protein N-term) 1184.6765 0.6764876 1135 P22234 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 66.475 64.928 2 1.4434E-09 78984 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 141.48 109.55 354730000 7584300 155750000 1938900 10038000 8585800 6626600 0 9964400 4884500 14280000 29326000 44970000 0 20090000 40689000 5003 1135 4537 43218;43219;43220;43221;43222;43223;43224;43225;43226;43227;43228;43229;43230;43231 34130;34131;34132;34133;34134;34135;34136;34137;34138;34139;34140;34141;34142;34143 34136 11 ATAFNEQVDK Unmodified 1121.5353 0.53530267 1221 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.79 27.988 2 0.00046371 30202 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 135.79 117.76 289960000 0 0 0 13296000 10332000 39481000 21405000 18873000 13672000 35441000 31121000 23638000 16383000 24498000 41821000 5004 1221 4538 43232;43233;43234;43235;43236;43237;43238;43239;43240;43241;43242;43243 34144;34145;34146;34147;34148;34149;34150;34151;34152;34153;34154 34144 11 ATAGAYIASQTVK Unmodified 1279.6772 0.67721588 1231 P28074 PSMB5 Proteasome subunit beta type-5 yes yes 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 42.553 42.729 2 0.0069178 47642 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 46.524 15.45 238720000 0 0 0 14015000 5784100 0 7493700 13109000 0 10001000 39621000 23242000 0 22528000 102930000 5005 1231 4539 43244;43245;43246;43247;43248;43249;43250;43251;43252 34155;34156;34157 34156 1 ATAGAYIASQTVKK Unmodified 1407.7722 0.7721789 1231 P28074 PSMB5 Proteasome subunit beta type-5 yes yes 0 0 1 By matching By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 34.13 34.36 3 0.049492 36667 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 22.214 7.5274 14888000 0 0 0 2496900 0 0 0 2975000 0 0 2865400 0 0 0 6551000 5006 1231 4540 43253;43254;43255;43256 34158 34158 1 ATAGDTHLGGEDFDNR Unmodified 1674.7234 0.72339081 908;1047 P0DMV9;P0DMV8;P17066;P48741 HSPA1B;HSPA1A;HSPA6;HSPA7 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.19 2.31 1 2 24 1 2 2 2 2 2 2 2 2 2 2 2 2 2 36.495 36.099 2;3 1.7758E-130 38780 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 231.52 224.99 2918300000 355900 25742000 0 152500000 91348000 151010000 107790000 121680000 76242000 178730000 264250000 426310000 194000000 291450000 836860000 5007 908;1047 4541 43257;43258;43259;43260;43261;43262;43263;43264;43265;43266;43267;43268;43269;43270;43271;43272;43273;43274;43275;43276;43277;43278;43279;43280;43281;43282;43283 34159;34160;34161;34162;34163;34164;34165;34166;34167;34168;34169;34170;34171;34172;34173;34174;34175;34176;34177;34178 34170 14 ATAGDTHLGGEDFDNRLVNHFVEEFK Unmodified 2917.3631 0.36309897 908 P0DMV9;P0DMV8 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 0 0 1 By MS/MS By MS/MS 2.33 0.624 1 6 5 7 5 92.357 87.872 3;4;5 2.5141E-108 95915 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 152.88 138.65 2839700000 2511900000 327780000 0 0 0 0 0 0 0 0 0 0 0 0 0 5008 908 4542 43284;43285;43286;43287;43288;43289;43290;43291;43292;43293;43294;43295 34179;34180;34181;34182;34183;34184;34185;34186;34187;34188;34189;34190;34191;34192 34184 11 ATAIDIATSK Unmodified 989.53933 0.53932542 315 O43301 HSPA12A Heat shock 70 kDa protein 12A yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 42.77 37.81 2 0.0066745 47371 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 82.287 51.675 67307000 0 67307000 0 0 0 0 0 0 0 0 0 0 0 0 0 5009 315 4543 43296;43297 34193;34194 34194 2 ATANHAAELLAK Unmodified 1208.6513 0.65133548 2282 Q13415 ORC1 Origin recognition complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33.387 32.634 2 1.9774E-14 47362 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 143 86.08 69628000 12118000 5375500 0 4038400 3443400 2899900 3946000 4732600 2746700 5979400 5698000 10825000 0 2800000 5025000 5010 2282 4544 43298;43299;43300;43301;43302;43303;43304;43305;43306;43307;43308;43309;43310;43311 34195;34196;34197;34198 34197 4 ATAPGPEGGGTLHPNPTDK Unmodified 1815.8751 0.87514042 1788 P56945 BCAR1 Breast cancer anti-estrogen resistance protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 4 1 1 1 1 1 1 1 1 1 1 1 1 34.181 33.13 2;3 7.5095E-07 40623 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 97.095 86.481 358770000 0 214910000 0 9087200 6438100 13451000 9105000 9378000 9321800 15458000 15198000 13264000 13824000 11526000 17807000 5011 1788 4545 43312;43313;43314;43315;43316;43317;43318;43319;43320;43321;43322;43323;43324;43325;43326;43327 34199;34200;34201;34202;34203;34204;34205;34206;34207;34208;34209;34210;34211;34212;34213;34214;34215;34216;34217;34218;34219;34220;34221 34210 22 ATAPQTQHVSPMR Unmodified 1422.7038 0.70378176 1255 P29692 EEF1D Elongation factor 1-delta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 22.863 23.069 2;3 8.0489E-12 23349 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 97.463 88.574 842380000 0 0 0 27278000 32606000 46707000 34148000 41262000 23925000 73542000 84664000 144700000 55069000 103830000 174650000 5012 1255 4546 43328;43329;43330;43331;43332;43333;43334;43335;43336;43337;43338;43339;43340;43341;43342;43343;43344;43345;43346;43347;43348;43349;43350;43351 34222;34223;34224;34225;34226;34227;34228;34229;34230;34231;34232;34233;34234;34235;34236;34237 34234 16 ATAPQTQHVSPMR Oxidation (M) 1438.6987 0.69869638 1255 P29692 EEF1D Elongation factor 1-delta yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 17 2 1 1 2 1 2 1 2 2 1 1 1 14.411 14.581 2;3 0.00066181 14279 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 66.595 52.477 356710000 0 0 0 43790000 1985300 2546400 35950000 42299000 34208000 6413900 87323000 80348000 4723600 5900200 11227000 5013 1255 4546 43352;43353;43354;43355;43356;43357;43358;43359;43360;43361;43362;43363;43364;43365;43366;43367;43368 34238;34239;34240;34241;34242 34241 1855 3 ATAPQTQHVSPMRQVEPPAK Unmodified 2172.111 0.11097079 1255 P29692 EEF1D Elongation factor 1-delta yes yes 0 0 1 By MS/MS 2 0 1 1 46.544 39.066 4 0.014813 54169 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 22.936 15.039 26961000 26961000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5014 1255 4547 43369 34243 34243 1 ATAPVGGPK Unmodified 796.4443 0.44430282 231 O14965 AURKA Aurora kinase A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 6 4 2 2 1 1 1 1 13.292 11.933 2 0.021281 11606 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 52.403 12.757 95737000 0 38311000 7001100 0 0 0 27373000 0 23053000 0 0 0 0 0 0 5015 231 4548 43370;43371;43372;43373 34244;34245;34246 34246 3 ATAPVPTVGEGYGYGHESELSQASAAAR Unmodified 2775.31 0.31000077 4209 Q9BWF3 RBM4 RNA-binding protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 67.757 67.906 3 7.7764E-101 77230 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 130.01 126.6 356310000 0 0 0 0 20647000 25872000 31605000 26717000 25058000 44774000 30793000 41452000 24271000 27702000 57424000 5016 4209 4549 43374;43375;43376;43377;43378;43379;43380;43381;43382;43383;43384 34247;34248;34249;34250;34251;34252;34253;34254;34255;34256;34257;34258;34259;34260 34252 14 ATAPVSFNYYGVVTGPSASK Unmodified 2015 6.5850998E-06 2822 Q5VW32 BROX BRO1 domain-containing protein BROX yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 82.274 80.025 2 1.9954E-12 98754 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.19 84.936 97060000 0 89601000 0 0 0 0 0 0 0 0 0 0 0 0 7459100 5017 2822 4550 43385;43386 34261;34262 34261 2 ATAPYNYSYIFK Acetyl (Protein N-term) 1478.7082 0.70818166 1834 P61106 RAB14 Ras-related protein Rab-14 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.79 2.98 1 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90.083 90.17 2 3.0059E-05 102793 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 88.496 80.452 317540000 32294000 50760000 0 5908000 15798000 18437000 14109000 22984000 13721000 27766000 24395000 24680000 11985000 15991000 38715000 5018 1834 4551 43387;43388;43389;43390;43391;43392;43393;43394;43395;43396;43397;43398;43399;43400 34263;34264;34265;34266;34267;34268;34269;34270;34271;34272;34273 34266 9 ATAQPPAPLSPDSGSPSPDSGSASPVEEEDVGSSEK Unmodified 3465.5543 0.55432596 646 O95361 TRIM16 Tripartite motif-containing protein 16 yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 66.389 66.471 3 7.016E-06 76300 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 25.657 23.374 16363000 0 0 0 0 0 5623900 2931400 0 0 0 0 0 7808200 0 0 5019 646 4552 43401;43402;43403 34274 34274 1 ATASSSAQEMEQQLAERECPPHAEQRQPTK Unmodified 3394.563 0.56301412 4475 Q9H9Q2 COPS7B COP9 signalosome complex subunit 7b yes yes 0 0 2 By MS/MS 2 0 1 1 61.549 57.779 4 9.5855E-07 71897 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 44.931 39.611 5388600 0 0 5388600 0 0 0 0 0 0 0 0 0 0 0 0 5020 4475 4553 43404 34275 34275 1 ATATIALQVNGQQGGGSEPAAAAAVVAAGDK Acetyl (Protein N-term) 2835.4363 0.43626392 4912 Q9UHX1 PUF60 Poly(U)-binding-splicing factor PUF60 yes yes 1 0 0 By MS/MS 2 0 1 1 90.451 82.32 3 2.6962E-10 106920 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.865 42.015 8441200 8441200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5021 4912 4554 43405 34276 34276 1 ATATISAKPQITNPK Unmodified 1539.8621 0.86205654 5123 Q9Y2W2 WBP11 WW domain-binding protein 11 yes yes 0 0 1 By MS/MS 2 0 1 1 43.741 36.948 3 2.9574E-10 50729 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.663 71.559 24523000 24523000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5022 5123 4555 43406 34277;34278 34278 2 ATATQLLQHPFIK Unmodified 1466.8245 0.82454882 2250 Q13188 STK3 Serine/threonine-protein kinase 3;Serine/threonine-protein kinase 3 36kDa subunit;Serine/threonine-protein kinase 3 20kDa subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.958 73.022 3 0.0018258 83833 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 56.551 19.597 132420000 0 0 0 5522100 5676100 16251000 6657000 7184200 9860400 13374000 10115000 16355000 8269200 10600000 22554000 5023 2250 4556 43407;43408;43409;43410;43411;43412;43413;43414;43415;43416;43417;43418 34279;34280;34281;34282;34283;34284;34285;34286;34287;34288;34289 34283 11 ATATQLLQHPFVR Unmodified 1480.815 0.81504677 2227 Q13043 STK4 Serine/threonine-protein kinase 4;Serine/threonine-protein kinase 4 37kDa subunit;Serine/threonine-protein kinase 4 18kDa subunit yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 69.547 69.686 3 0.048494 79256 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 28.228 13.971 39411000 0 0 0 0 1325000 6248300 2437400 2590700 0 0 3619200 4361300 4168800 4365400 10295000 5024 2227 4557 43419;43420;43421;43422;43423;43424;43425;43426;43427 34290 34290 1 ATAVLVIASTDVDK Unmodified 1401.7715 0.7715102 4242 Q9BY44 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 77.552 72.951 2 0.00082161 88037 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 94.767 94.767 171170000 125860000 34291000 11013000 0 0 0 0 0 0 0 0 0 0 0 0 5025 4242 4558 43428;43429;43430;43431;43432 34291;34292;34293;34294;34295 34293 4 ATAVMPDGQFK Oxidation (M) 1179.5594 0.55940893 2131 Q06830 PRDX1 Peroxiredoxin-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.19 3.25 1 19 16 11 9 25 2 1 1 1 1 1 1 1 1 1 1 1 39.374 35.961 2 2.5947E-09 41396 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 141.48 137.91 7762000000 878970000 5465500000 106720000 97184000 0 93355000 0 0 0 0 271940000 258530000 65121000 155580000 369110000 5026 2131 4559 43433;43434;43435;43436;43437;43438;43439;43440;43441;43442;43443;43444;43445;43446;43447;43448;43449;43450;43451;43452;43453;43454;43455;43456;43457;43458;43459;43460;43461;43462;43463;43464;43465;43466;43467;43468;43469;43470;43471;43472;43473;43474;43475;43476;43477;43478;43479 34296;34297;34298;34299;34300;34301;34302;34303;34304;34305;34306;34307;34308;34309;34310;34311;34312;34313;34314;34315;34316;34317;34318;34319;34320;34321;34322;34323;34324;34325;34326;34327;34328;34329;34330;34331;34332;34333;34334;34335;34336;34337;34338;34339;34340;34341;34342;34343;34344;34345;34346;34347;34348;34349;34350 34303 3433 50 ATAVMPDGQFK Unmodified 1163.5645 0.56449431 2131 Q06830 PRDX1 Peroxiredoxin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.88 3.84 1 6 3 15 3 5 2 1 1 1 2 1 1 1 2 1 1 2 1 51.091 49.475 2 3.8345E-06 53175 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 141.48 141.48 21423000000 925700000 17061000000 122020000 245920000 116810000 174250000 152110000 194180000 103840000 277790000 688980000 773670000 146750000 430570000 9607900 5027 2131 4559 43480;43481;43482;43483;43484;43485;43486;43487;43488;43489;43490;43491;43492;43493;43494;43495;43496;43497;43498;43499;43500;43501;43502;43503;43504 34351;34352;34353;34354;34355;34356;34357;34358;34359;34360;34361;34362;34363;34364;34365;34366;34367;34368;34369;34370;34371;34372;34373;34374;34375;34376;34377;34378 34376 25 ATAVVDGAFK Unmodified 977.5182 0.51819605 1317 P32119 PRDX2 Peroxiredoxin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.35 3.89 1 10 5 18 5 8 3 2 1 1 2 2 1 2 1 1 2 2 1 46.039 43.124 2 7.9923E-05 48037 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.52 90.162 17961000000 796340000 15752000000 295990000 4119300 62273000 86158000 0 145730000 59499000 0 0 0 2954400 4259400 751810000 5028 1317 4560 43505;43506;43507;43508;43509;43510;43511;43512;43513;43514;43515;43516;43517;43518;43519;43520;43521;43522;43523;43524;43525;43526;43527;43528;43529;43530;43531;43532;43533;43534;43535;43536;43537;43538 34379;34380;34381;34382;34383;34384;34385;34386;34387;34388;34389;34390;34391;34392;34393;34394;34395;34396;34397;34398;34399;34400;34401;34402;34403;34404;34405;34406;34407;34408;34409;34410;34411;34412;34413;34414;34415;34416;34417;34418;34419 34385 40 ATCAEILR Acetyl (Protein N-term) 974.48552 0.48551571 4653 Q9NUQ8 ABCF3 ATP-binding cassette sub-family F member 3 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 59.948 60.145 2 0.0069143 68807 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 61.999 33.487 288940000 0 0 0 0 19681000 0 27154000 22120000 21130000 32549000 34582000 40880000 26257000 24401000 40185000 5029 4653 4561 43539;43540;43541;43542;43543;43544;43545;43546;43547;43548 34420;34421;34422;34423 34421 4 ATCAPQHGAPGPGPADASK Unmodified 1788.8213 0.82133071 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.95 3.75 5 3 12 1 6 1 1 1 1 1 1 1 1 1 1 1 1 1 20.841 19.392 2;3 1.5768E-87 35539 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 176.1 163.61 3469300000 138930000 2481800000 36592000 40650000 36997000 57135000 48143000 39424000 40952000 87075000 80114000 94327000 66399000 84956000 135770000 5030 1124 4562 43549;43550;43551;43552;43553;43554;43555;43556;43557;43558;43559;43560;43561;43562;43563;43564;43565;43566;43567;43568 34424;34425;34426;34427;34428;34429;34430;34431;34432;34433;34434;34435;34436;34437;34438;34439;34440;34441;34442;34443;34444;34445;34446;34447;34448;34449 34433 26 ATCFAYGQTGSGK Unmodified 1346.5925 0.59249998 4043 Q99661 KIF2C Kinesin-like protein KIF2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 32.786 32.98 2 0.0043029 35874 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 62.408 55.279 40908000 0 0 0 0 2363400 3568500 3527900 3328600 3425900 0 6623000 0 5291100 5229000 7551000 5031 4043 4563 43569;43570;43571;43572;43573;43574;43575;43576;43577 34450;34451;34452;34453 34451 4 ATCGTVGDDNEEAK Unmodified 1465.5991 0.5991015 1397 P38432 COIL Coilin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 11.155 11.261 2 0.0019335 9815 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 53.569 47.788 18749000 0 0 0 1074600 1445400 1848000 1847000 1642900 2039200 1365400 0 2880800 0 2301800 2303500 5032 1397 4564 43578;43579;43580;43581;43582;43583;43584;43585;43586;43587 34454;34455;34456;34457 34457 4 ATCIGNNSAAAVSMLK Unmodified 1606.7807 0.78071145 1196 P25789 PSMA4 Proteasome subunit alpha type-4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 67.004 65.421 2;3 2.8012E-45 83626 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 156.69 138.82 1438200000 36179000 1212800000 2389000 9445900 3392700 6223400 2963100 6318100 2598400 6343900 27704000 23310000 5262800 23086000 70123000 5033 1196 4565 43588;43589;43590;43591;43592;43593;43594;43595;43596;43597;43598;43599;43600;43601;43602;43603;43604 34458;34459;34460;34461;34462;34463;34464;34465;34466;34467;34468;34469;34470;34471;34472;34473;34474 34462 17 ATCIGNNSAAAVSMLK Oxidation (M) 1622.7756 0.77562607 1196 P25789 PSMA4 Proteasome subunit alpha type-4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.35 3.64 5 3 15 2 6 2 1 1 1 1 2 2 1 2 2 53.62 51.448 2;3 4.5641E-45 63590 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 153.74 147.7 595000000 15018000 412670000 0 8348100 4463200 5141100 0 0 4237600 6073700 35191000 12052000 10412000 30526000 50864000 5034 1196 4565 43605;43606;43607;43608;43609;43610;43611;43612;43613;43614;43615;43616;43617;43618;43619;43620;43621;43622;43623;43624;43625;43626;43627 34475;34476;34477;34478;34479;34480;34481;34482;34483;34484;34485;34486;34487;34488;34489 34481 1730 15 ATCNNYTPQFQLR Unmodified 1611.7464 0.74637486 2781 Q5T749 KPRP Keratinocyte proline-rich protein yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 64.797 64.518 2 0.002012 74630 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 73.067 58.094 6627400 0 0 0 5043400 0 0 1584000 0 0 0 0 0 0 0 0 5035 2781 4566 43628;43629 34490 34490 1 ATDAAYQARQAVK Unmodified 1391.7157 0.71572665 4326 Q9H0E9 BRD8 Bromodomain-containing protein 8 yes yes 0 0 1 By MS/MS By MS/MS By matching 2 0 3 1 1 1 26.499 22.295 3 0.0019542 29525 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 50.467 27.241 32691000 8745900 18111000 5833900 0 0 0 0 0 0 0 0 0 0 0 0 5036 4326 4567 43630;43631;43632 34491 34491 1 ATDAEADVASLNR Unmodified 1331.6317 0.63172225 90;853;884 CON__Q3SX28;P07951;P09493 TPM2;TPM1 Tropomyosin beta chain;Tropomyosin alpha-1 chain no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 42.293 42.474 2 4.7132E-09 47407 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 112.13 89.787 + 139650000 0 0 0 5420000 5883200 4120700 5904200 5685300 0 7879700 20069000 14500000 9729500 16042000 44417000 5037 90;853;884 4568 43633;43634;43635;43636;43637;43638;43639;43640;43641;43642;43643;43644 34492;34493;34494;34495;34496;34497;34498;34499;34500;34501;34502;34503 34500 12 ATDAEADVASLNRR Unmodified 1487.7328 0.73283328 90;853;884 CON__Q3SX28;P07951;P09493 TPM2;TPM1 Tropomyosin beta chain;Tropomyosin alpha-1 chain no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.15 2.41 2 1 24 2 1 2 2 2 2 2 2 2 2 2 2 2 2 38.5 38.164 2;3 1.3129E-15 42235 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 117.93 112.85 + 1217300000 0 18160000 7858900 3963100 40751000 36915000 41657000 64457000 28586000 53193000 194390000 180420000 70141000 141000000 335830000 5038 90;853;884 4569 43645;43646;43647;43648;43649;43650;43651;43652;43653;43654;43655;43656;43657;43658;43659;43660;43661;43662;43663;43664;43665;43666;43667;43668;43669;43670;43671 34504;34505;34506;34507;34508;34509;34510;34511;34512;34513;34514;34515;34516;34517;34518;34519;34520;34521;34522;34523 34512 17 ATDDLINVTGR Unmodified 1173.599 0.59896556 4954 Q9UK59 DBR1 Lariat debranching enzyme yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 54.228 54.364 2 2.5826E-05 61298 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 120.76 94.658 285070000 0 0 0 26608000 19099000 20315000 18727000 14424000 14006000 23968000 28714000 28578000 27566000 25225000 37837000 5039 4954 4570 43672;43673;43674;43675;43676;43677;43678;43679;43680;43681;43682;43683 34524;34525;34526;34527;34528;34529;34530;34531;34532;34533;34534;34535;34536;34537 34528 14 ATDDYHYEK Unmodified 1140.4724 0.47236807 4761 Q9NZ63 C9orf78 Uncharacterized protein C9orf78 yes yes 0 0 0 By matching By MS/MS By MS/MS 2 0 3 1 1 1 14.363 11.148 3 0.026561 14647 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 42.718 31.553 97241000 12164000 82265000 2812100 0 0 0 0 0 0 0 0 0 0 0 0 5040 4761 4571 43684;43685;43686 34538 34538 1 ATDELATK Acetyl (Protein N-term) 889.43928 0.43927702 3770 Q96C19 EFHD2 EF-hand domain-containing protein D2 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 9.55 1.96 1 19 1 2 1 2 2 1 1 2 2 2 1 1 2 36.052 36.511 1;2 0.0012227 34987 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.318 45.366 355660000 61769000 0 0 21313000 4058500 25851000 30716000 4491400 4177600 34353000 45081000 42911000 8830000 7560800 64547000 5041 3770 4572 43687;43688;43689;43690;43691;43692;43693;43694;43695;43696;43697;43698;43699;43700;43701;43702;43703;43704;43705;43706 34539;34540;34541;34542;34543;34544;34545;34546;34547;34548;34549;34550;34551;34552;34553 34545 7 ATDFVADRAGTFK Unmodified 1397.6939 0.69392858 1553 P48735 IDH2 Isocitrate dehydrogenase [NADP], mitochondrial yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 53.667 48.8 3 0.039015 63922 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 22.475 13.425 34061000 0 19989000 14072000 0 0 0 0 0 0 0 0 0 0 0 0 5042 1553 4573 43707;43708 34554;34555 34554 2 ATDFVVPGPGK Unmodified 1086.571 0.5709599 552 O75874 IDH1 Isocitrate dehydrogenase [NADP] cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 54.167 54.309 2 0.00037948 62655 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 87.308 79.368 177470000 0 0 0 12580000 3711800 0 5749900 6281300 2990000 0 28528000 23043000 4661600 17328000 72596000 5043 552 4574 43709;43710;43711;43712;43713;43714;43715;43716;43717;43718 34556;34557;34558;34559;34560;34561;34562;34563;34564;34565 34564 10 ATDGVTLTGINQTGDQSLPSK Unmodified 2102.0491 0.049141622 5030 Q9UNF0 PACSIN2 Protein kinase C and casein kinase substrate in neurons protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 2 2 24 1 3 2 2 2 2 2 2 2 2 2 2 2 2 67.265 66.78 2;3 1.7266E-92 82843 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 166.09 143.21 258910000 0 29022000 0 11128000 10515000 20145000 13949000 13706000 9491300 17545000 27503000 22828000 16695000 16384000 49994000 5044 5030 4575 43719;43720;43721;43722;43723;43724;43725;43726;43727;43728;43729;43730;43731;43732;43733;43734;43735;43736;43737;43738;43739;43740;43741;43742;43743;43744;43745;43746 34566;34567;34568;34569;34570;34571;34572;34573;34574;34575;34576;34577;34578;34579;34580;34581;34582;34583;34584 34570 19 ATDLGEPER Unmodified 986.46689 0.46688876 2565 Q15714 TSC22D1 TSC22 domain family protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 18.822 19.414 2 0.043053 18938 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.772 20.753 2506200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2506200 5045 2565 4576 43747 34585 34585 1 ATDLGGTSQAGTSQR Unmodified 1448.6855 0.68554874 3073 Q7Z2W4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.725 16.904 2 6.3139E-20 16424 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 135.6 125.91 65882000 0 0 0 2582200 4652000 3800600 8446500 5739400 4929800 4484600 6959900 7617700 5849000 4087500 6732700 5046 3073 4577 43748;43749;43750;43751;43752;43753;43754;43755;43756;43757;43758;43759 34586;34587;34588;34589;34590;34591;34592;34593;34594;34595;34596;34597 34595 12 ATDPSQVPDVISSIR Unmodified 1583.8155 0.81550028 398 O60343 TBC1D4 TBC1 domain family member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.281 77.338 2 1.9434E-28 89419 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 142.97 112.14 248430000 0 0 0 13452000 15423000 22362000 14889000 17160000 14514000 22762000 27175000 26810000 19364000 20725000 33792000 5047 398 4578 43760;43761;43762;43763;43764;43765;43766;43767;43768;43769;43770;43771 34598;34599;34600;34601;34602;34603;34604;34605;34606;34607;34608 34602 11 ATDSWALAVDEQEAAAESLSNLHLK Acetyl (Protein N-term) 2710.3086 0.30860379 5016 Q9UMR2 DDX19B ATP-dependent RNA helicase DDX19B yes yes 1 0 0 By MS/MS 2.33 0.471 2 1 3 98.859 94.599 2;3 5.2343E-223 116858 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 283.05 269.95 204900000 0 204900000 0 0 0 0 0 0 0 0 0 0 0 0 0 5048 5016 4579 43772;43773;43774 34609;34610;34611;34612 34610 4 ATDSWALAVDEQEAAVK Acetyl (Protein N-term) 1844.8792 0.87922275 4655 Q9NUU7 DDX19A ATP-dependent RNA helicase DDX19A yes yes 1 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.62 3.25 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 89.993 90.598 2 7.4582E-66 90227 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 166.7 141.27 631370000 42727000 498310000 0 0 4517800 7333800 4133800 5516200 5846000 16285000 11833000 13011000 0 5001500 16845000 5049 4655 4580 43775;43776;43777;43778;43779;43780;43781;43782;43783;43784;43785;43786;43787 34613;34614;34615;34616;34617;34618;34619;34620;34621;34622;34623;34624;34625;34626 34620 14 ATDTINSQGQFPSYLETVTK Unmodified 2199.0695 0.069542713 3204 Q86Y56 DNAAF5 Dynein assembly factor 5, axonemal yes yes 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.835 80.895 2 0.0022197 93153 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 56.569 45.129 115070000 0 0 0 3464100 6567500 10127000 7516900 8792400 4906900 12171000 13704000 13209000 9778900 9649500 15183000 5050 3204 4581 43788;43789;43790;43791;43792;43793;43794;43795;43796;43797;43798;43799 34627 34627 1 ATDTLDSTGRVTEEK Unmodified 1621.7795 0.7795087 3572 Q8WWH5 TRUB1 Probable tRNA pseudouridine synthase 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.47 3.59 3 2 10 4 1 1 1 1 1 1 1 1 1 1 1 28.154 26.874 2;3 1.4243E-16 34455 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.417 88.135 230120000 0 148100000 2905900 3441000 5630200 9121300 6630800 8737300 0 9147000 10750000 0 8528400 8688600 8444100 5051 3572 4582 43800;43801;43802;43803;43804;43805;43806;43807;43808;43809;43810;43811;43812;43813;43814 34628;34629;34630;34631 34628 3 ATDTSQGELVHPK Acetyl (Protein N-term) 1423.6943 0.69432251 2757 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 yes yes 1 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 37.095 36.874 2 2.1321E-13 40861 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 134.68 124.44 165650000 0 30399000 0 10793000 8116900 8076500 10131000 8426900 7679200 12912000 12006000 18756000 12580000 8580600 17192000 5052 2757 4583 43815;43816;43817;43818;43819;43820;43821;43822;43823;43824;43825;43826;43827 34632;34633;34634;34635;34636;34637;34638;34639;34640;34641;34642;34643 34633 12 ATEAGSLEAR Unmodified 1003.4934 0.49343786 3693 Q92974 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 2 1 1 17.019 17.22 2 0.00042243 17339 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 137.14 81.124 583890000 0 0 0 36628000 33970000 45770000 41574000 42193000 40130000 49941000 68964000 96834000 0 56482000 71404000 5053 3693 4584 43828;43829;43830;43831;43832;43833;43834;43835;43836;43837;43838;43839 34644;34645;34646;34647;34648;34649;34650;34651;34652;34653;34654;34655;34656 34650 12 ATEATAMAMGR 2 Oxidation (M) 1140.4903 0.49034309 3208 Q86YP4 GATAD2A Transcriptional repressor p66-alpha yes yes 0 2 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 7.5405 7.6398 2 0.00030266 5149 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.221 70.912 24553000 0 0 0 1931200 1882300 2140500 1802500 0 0 2863200 0 4240100 3993600 2231000 3468500 5054 3208 4585 43840;43841;43842;43843;43844;43845;43846;43847;43848 34657;34658;34659;34660;34661;34662;34663;34664 34659 4824;4825 8 ATEDAEGGDGPRLPQR Unmodified 1667.7863 0.78632542 3523 Q8TF01 PNISR Arginine/serine-rich protein PNISR yes yes 0 0 1 By MS/MS 10 0 1 1 31.56 31.147 3 0.029164 34165 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 28.212 13.65 3103800 0 0 0 0 3103800 0 0 0 0 0 0 0 0 0 0 5055 3523 4586 43849 34665 34665 1 ATEDGTPYDPYK Unmodified 1355.5881 0.5881261 1132 P22059 OSBP Oxysterol-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 38.486 38.725 2 1.8487E-06 42565 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 114.4 103.24 108730000 0 0 0 5440600 0 8215800 8127400 5410700 7552900 11483000 12897000 16226000 7909900 7536700 17927000 5056 1132 4587 43850;43851;43852;43853;43854;43855;43856;43857;43858;43859;43860 34666;34667;34668;34669;34670;34671;34672;34673 34672 7 ATEEFIIR Acetyl (Protein N-term) 1019.5288 0.52876073 2444 Q14764 MVP Major vault protein yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.342 79.387 2 0.001601 91183 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 130.04 104.64 85917000 0 0 0 11820000 11027000 7323400 9238300 7683500 4577300 0 7815100 0 6827300 8425700 11179000 5057 2444 4588 43861;43862;43863;43864;43865;43866;43867;43868;43869;43870;43871 34674;34675;34676;34677;34678;34679;34680;34681;34682;34683;34684;34685 34677 12 ATEEIEDRETLALLAARSENEGTSDGETYIEK Unmodified 3539.6751 0.6751098 4350 Q9H1H9 KIF13A Kinesin-like protein KIF13A yes yes 0 0 2 By MS/MS 2 0 1 1 83.99 75.86 4 1.2659E-118 99134 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 141.75 132.37 34493000 34493000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5058 4350 4589 43872 34686 34686 1 ATEEPEDVR Unmodified 1044.4724 0.47236807 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 15.477 15.641 2 0.0030483 14211 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 91.318 66.467 74540000 0 0 0 4208200 2793700 5121700 5224400 0 2736400 4712200 7812400 12026000 0 9826200 20079000 5059 5216 4590 43873;43874;43875;43876;43877;43878;43879;43880;43881;43882 34687;34688;34689;34690;34691 34690 5 ATEEQFTTMK Oxidation (M) 1200.5333 0.53325376 5381 yes yes 0 1 0 By MS/MS By MS/MS 2 0 3 2 1 46.769 41.789 2 0.013762 54597 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.981 46.434 + 38284000 0 34837000 3447200 0 0 0 0 0 0 0 0 0 0 0 0 5060 5381 4591 43883;43884;43885 34692 34692 6758 1 ATEEQLK Unmodified 817.41815 0.41814765 65 CON__P02769 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 7.3346 7.4635 2 0.044016 5621 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 66.993 15.421 + 10985000 0 0 0 0 0 1588100 0 0 1229500 7149600 0 0 1017800 0 0 5061 65 4592 43886;43887;43888;43889 34693 34693 1 ATEGMVVADK Unmodified 1019.4957 0.49574604 4007 Q99436 PSMB7 Proteasome subunit beta type-7 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 2 1 1 1 24.976 25.284 2 0.0013675 26477 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 107.15 85.068 269360000 0 0 0 36690000 6481500 0 0 0 3607100 0 37766000 37232000 8785700 29794000 109010000 5062 4007 4593 43890;43891;43892;43893;43894;43895;43896;43897;43898;43899;43900;43901;43902 34694;34695;34696;34697;34698;34699;34700;34701;34702 34701 9 ATEGMVVADK Oxidation (M) 1035.4907 0.49066067 4007 Q99436 PSMB7 Proteasome subunit beta type-7 yes yes 0 1 0 By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 13.386 13.527 2 0.0073553 12057 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 54.722 13.535 52757000 0 0 0 8641900 2717100 0 2192800 0 2072200 4142800 12879000 11797000 0 8314800 0 5063 4007 4593 43903;43904;43905;43906;43907;43908;43909;43910 34703 34703 5486 1 ATEHPEPPK Acetyl (Protein N-term) 1046.5033 0.50327426 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 21.898 22.177 2 3.6981E-29 23155 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 182.53 147.71 822740000 0 0 0 44864000 0 0 71267000 56680000 77921000 87404000 96585000 111810000 81660000 92214000 102330000 5064 2290 4594 43911;43912;43913;43914;43915;43916;43917;43918;43919;43920;43921 34704;34705;34706;34707;34708;34709;34710;34711;34712;34713;34714;34715;34716;34717;34718 34705 15 ATEISTAVVQR Unmodified 1173.6354 0.63535107 3327 Q8N3X1 FNBP4 Formin-binding protein 4 yes yes 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 41.414 41.684 2 0.0014517 45364 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 85.731 64.442 39403000 0 0 0 0 2701400 3310300 0 0 2258300 5207800 4562700 5971100 5011700 4406200 5974000 5065 3327 4595 43922;43923;43924;43925;43926;43927;43928;43929;43930 34719;34720 34720 2 ATELLTLLK Unmodified 1000.6168 0.61684746 314 O43299 AP5Z1 AP-5 complex subunit zeta-1 yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 82.837 82.971 2 0.018576 96105 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 54.712 37.327 22319000 0 0 0 0 0 1802000 1268500 2313300 1364200 2473500 0 2127800 2287400 3500200 5181800 5066 314 4596 43931;43932;43933;43934;43935;43936;43937;43938;43939 34721;34722;34723;34724 34721 4 ATEMLIFGK Unmodified 1008.5314 0.53140327 511 O75521 ECI2 Enoyl-CoA delta isomerase 2, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 73.675 73.711 2 0.012004 84841 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 61.962 37.807 56046000 0 0 0 3498200 3689600 0 5042600 5512900 4552800 5986800 16600000 0 0 0 11163000 5067 511 4597 43940;43941;43942;43943;43944;43945;43946;43947 34725;34726;34727;34728;34729;34730 34726 6 ATEMLIFGK Oxidation (M) 1024.5263 0.52631789 511 O75521 ECI2 Enoyl-CoA delta isomerase 2, mitochondrial yes yes 0 1 0 By MS/MS By matching 2 0 2 1 1 62.305 57.466 2 0.029737 73849 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.207 39.576 17757000 0 16576000 1180700 0 0 0 0 0 0 0 0 0 0 0 0 5068 511 4597 43948;43949 34731 34731 1 ATEMVEVGADDDEGGAERGEAGDLR Unmodified 2548.0984 0.098353014 2911 Q6NZI2 PTRF Polymerase I and transcript release factor yes yes 0 0 1 By MS/MS 10 0 1 1 53.334 53.992 3 1.7544E-18 60454 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.644 68.195 4555800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4555800 5069 2911 4598 43950 34732 34732 1 ATEMVEVGADDDEGGAERGEAGDLR Oxidation (M) 2564.0933 0.093267636 2911 Q6NZI2 PTRF Polymerase I and transcript release factor yes yes 0 1 1 By MS/MS By matching 10 0 2 1 1 44.658 45.405 3 3.4661E-07 50493 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 44.632 41.534 13867000 0 0 0 0 0 0 0 0 0 0 0 9113000 0 0 4753800 5070 2911 4598 43951;43952 34733 34733 4539 1 ATEMVEVGADDDEGGAERGEAGDLRR Unmodified 2704.1995 0.19946404 2911 Q6NZI2 PTRF Polymerase I and transcript release factor yes yes 0 0 2 By MS/MS 10 0 1 1 47.453 48.184 4 0.0022408 53322 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 24.896 21.434 9630700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9630700 5071 2911 4599 43953 34734 34734 1 ATENDIANFFSPLNPIR Unmodified 1917.9585 0.95847612 1308 P31942 HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 2 2 1 1 2 94.336 94.489 2;3 0.0001003 109826 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 88.441 74.778 30935000 0 0 0 0 0 0 0 887260 1047900 6860900 3691900 1535700 0 1202800 15709000 5072 1308 4600 43954;43955;43956;43957;43958;43959;43960;43961;43962;43963 34735;34736;34737;34738;34739;34740 34739 4 ATENDIYNFFSPLNPMR Oxidation (M) 2043.936 0.93602612 1773 P55795 HNRNPH2 Heterogeneous nuclear ribonucleoprotein H2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 91.471 91.621 2 7.6864E-05 106398 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.958 65.234 27085000 0 0 0 0 0 1370400 738710 1867900 1170200 5957200 3824700 0 0 0 12156000 5073 1773 4601 43964;43965;43966;43967;43968;43969;43970 34741;34742;34743;34744;34745 34744 2891 5 ATENDIYNFFSPLNPVR Unmodified 1995.969 0.96904081 1692;1309 P31943;P52597 HNRNPH1;HNRNPF Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 1 1 1 1 2 2 2 2 2 2 2 93.993 94.091 2;3 2.9544E-82 109176 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 227.93 213.06 180110000 0 0 0 1395300 1837500 2166500 1682400 4952200 4227400 35989000 19121000 9780200 3158500 10871000 84925000 5074 1309;1692 4602 43971;43972;43973;43974;43975;43976;43977;43978;43979;43980;43981;43982;43983;43984;43985;43986;43987;43988;43989 34746;34747;34748;34749;34750;34751;34752;34753;34754;34755 34747 10 ATEPAADTGAQPK Unmodified 1255.6044 0.60444487 5059 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.024 14.187 2 1.4409E-08 12953 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 109.79 84.168 145710000 0 0 0 9764100 9355700 7432400 9467700 5686200 7803100 14219000 14802000 15195000 13147000 13555000 25287000 5075 5059 4603 43990;43991;43992;43993;43994;43995;43996;43997;43998;43999;44000;44001 34756;34757;34758;34759;34760;34761;34762;34763;34764;34765;34766;34767 34759 12 ATEPHMLETYTPEVTK Oxidation (M) 1861.8768 0.87677991 4923 Q9UIA9 XPO7 Exportin-7 yes yes 0 1 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 54.821 49.952 2;3 0.00015032 64841 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.914 78.105 20068000 0 12831000 7237000 0 0 0 0 0 0 0 0 0 0 0 0 5076 4923 4604 44002;44003;44004 34768;34769 34768 6276 2 ATEPHMLETYTPEVTK Unmodified 1845.8819 0.88186528 4923 Q9UIA9 XPO7 Exportin-7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.33 3.77 3 6 1 1 1 1 1 1 1 1 1 64.112 62.324 3 0.00022704 70109 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.47 55.682 428340000 9027300 372800000 10964000 0 0 5934100 0 0 0 0 5133200 5699800 2634700 3515900 12629000 5077 4923 4604 44005;44006;44007;44008;44009;44010;44011;44012;44013 34770;34771;34772 34771 2 ATEPVATSNPAGDPVGSTR Unmodified 1825.8806 0.88061973 2646 Q27J81 INF2 Inverted formin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.125 42.302 2 7.1498E-24 47240 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 131.66 127.8 144580000 0 0 0 8713900 8376900 11239000 10352000 8119400 9486200 13507000 15765000 19822000 12391000 9988100 16820000 5078 2646 4605 44014;44015;44016;44017;44018;44019;44020;44021;44022;44023;44024;44025 34773;34774;34775;34776;34777;34778;34779;34780;34781;34782;34783;34784;34785;34786 34783 14 ATEPVIAFYEK Unmodified 1266.6496 0.64960415 734 P00568 AK1 Adenylate kinase isoenzyme 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 73.725 73.041 2 0.0022961 91874 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.377 63.929 1509900000 0 1155800000 41202000 13066000 10308000 31422000 18637000 17913000 13823000 23729000 40194000 27877000 17099000 27421000 71430000 5079 734 4606 44026;44027;44028;44029;44030;44031;44032;44033;44034;44035;44036;44037;44038;44039;44040 34787;34788;34789;34790;34791;34792;34793;34794;34795;34796;34797;34798;34799;34800;34801;34802;34803;34804 34792 16 ATEQLVNDILR Unmodified 1270.6881 0.68811492 5000 Q9ULM3 YEATS2 YEATS domain-containing protein 2 yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 77.416 77.435 2 0.0067349 89512 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.806 33.066 44917000 0 0 0 1736800 4183000 3833400 1696100 3734200 0 7826000 6284400 11257000 0 4366300 0 5080 5000 4607 44041;44042;44043;44044;44045;44046;44047;44048;44049 34805;34806;34807;34808 34807 4 ATEQYYAMK Unmodified 1103.4957 0.49574604 1144 P22694 PRKACB cAMP-dependent protein kinase catalytic subunit beta yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 8 3.46 2 6 1 1 1 1 1 1 1 1 32.863 32.064 2 0.0075967 40498 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.299 80.914 94775000 0 72120000 710650 0 0 2481800 1760400 3061500 0 2537700 0 3975800 0 0 8127000 5081 1144 4608 44050;44051;44052;44053;44054;44055;44056;44057 34809;34810 34809 2 ATEQYYAMK Oxidation (M) 1119.4907 0.49066067 1144 P22694 PRKACB cAMP-dependent protein kinase catalytic subunit beta yes yes 0 1 0 By MS/MS 10 0 1 1 18.626 19.218 2 0.049264 19185 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 54.611 32.225 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5082 1144 4608 44058 34811 34811 1 ATESGAQSAPLPMEGVDISPK Oxidation (M) 2100.0045 0.0044996155 2080 Q02790 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.96 3.55 2 3 1 18 2 3 1 2 2 1 2 2 1 2 1 2 2 1 68.059 67.453 2;3 3.212E-128 101709 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 203.11 193.06 1145100000 236590000 215440000 2194500 50906000 0 63840000 40456000 34691000 40797000 35592000 116130000 64659000 66279000 92600000 84874000 5083 2080 4609 44059;44060;44061;44062;44063;44064;44065;44066;44067;44068;44069;44070;44071;44072;44073;44074;44075;44076;44077;44078;44079;44080;44081;44082 34812;34813;34814;34815;34816;34817;34818;34819;34820;34821;34822;34823;34824;34825;34826;34827;34828 34824 3383 17 ATESGAQSAPLPMEGVDISPK Unmodified 2084.0096 0.0095849934 2080 Q02790 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.81 1 2 1 24 2 2 2 2 2 2 2 2 2 2 2 2 2 2 77.841 77.5 2;3 8.2829E-107 93295 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 238.12 224.53 1750700000 145200000 243770000 0 43857000 34468000 71867000 54608000 63271000 37410000 90311000 170000000 148790000 66550000 124760000 455800000 5084 2080 4609 44083;44084;44085;44086;44087;44088;44089;44090;44091;44092;44093;44094;44095;44096;44097;44098;44099;44100;44101;44102;44103;44104;44105;44106;44107;44108;44109;44110 34829;34830;34831;34832;34833;34834;34835;34836;34837;34838;34839;34840;34841;34842;34843;34844;34845;34846;34847 34835 14 ATETTDEDEDGGSEK Unmodified 1582.6118 0.61183425 3387 Q8NB78 KDM1B Lysine-specific histone demethylase 1B yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 6.779 6.8918 2 1.6849E-05 4345 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.096 72.783 14974000 0 0 0 731030 960770 1212200 1278500 1516800 1485700 1482600 1545100 1316200 1662500 0 1783100 5085 3387 4610 44111;44112;44113;44114;44115;44116;44117;44118;44119;44120;44121 34848 34848 1 ATETVELHK Acetyl (Protein N-term) 1068.5451 0.54513908 2004 P82979 SARNP SAP domain-containing ribonucleoprotein yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.87 3.56 1 2 1 11 2 2 1 1 1 1 1 1 1 1 1 1 1 42.009 41.414 2 3.949E-29 40597 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 182.39 151.77 2131900000 101540000 1072500000 0 43533000 55000000 0 66140000 53334000 40407000 74528000 112750000 183810000 71792000 93212000 163410000 5086 2004 4611 44122;44123;44124;44125;44126;44127;44128;44129;44130;44131;44132;44133;44134;44135;44136 34849;34850;34851;34852;34853;34854;34855;34856;34857;34858;34859;34860;34861;34862;34863;34864;34865;34866 34863 17 ATEVLSAVLK Unmodified 1029.607 0.60701105 4284 Q9C0B7 TANGO6 Transport and Golgi organization protein 6 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 77.311 72.536 2 0.0033254 90449 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.034 36.881 32198000 0 32198000 0 0 0 0 0 0 0 0 0 0 0 0 0 5087 4284 4612 44137 34867 34867 1 ATEVQFPVKPVVSSEAK Unmodified 1814.9778 0.97781458 4967 Q9UKI8 TLK1 Serine/threonine-protein kinase tousled-like 1 yes yes 0 0 1 By MS/MS 2 0 1 1 74.619 69.464 3 0.00037156 87224 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.716 55.435 21038000 0 21038000 0 0 0 0 0 0 0 0 0 0 0 0 0 5088 4967 4613 44138 34868 34868 1 ATEYHLGLLK Unmodified 1143.6288 0.62880913 1753 P55039 DRG2 Developmentally-regulated GTP-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.8 2.86 3 17 1 1 1 1 1 2 2 2 1 2 1 1 1 1 2 59.88 59.109 2;3 0.0049444 83403 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.334 43.61 403310000 182070000 52076000 44652000 4580000 2858800 17400000 7564400 9442200 6358300 14774000 11327000 9270200 9583300 6007300 25350000 5089 1753 4614 44139;44140;44141;44142;44143;44144;44145;44146;44147;44148;44149;44150;44151;44152;44153;44154;44155;44156;44157;44158 34869;34870;34871;34872;34873;34874;34875;34876;34877;34878;34879;34880;34881 34875 13 ATFAFGAQTSTTADQGAAK Unmodified 1842.8748 0.87480607 1600 P49790 NUP153 Nuclear pore complex protein Nup153 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.86 3.4 1 1 5 2 1 1 1 1 1 59.153 57.213 2 4.9334E-102 72731 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 243.88 223.45 83574000 0 54939000 0 0 0 0 0 6034400 0 0 0 0 0 6213200 16387000 5090 1600 4615 44159;44160;44161;44162;44163;44164;44165 34882;34883;34884;34885;34886;34887;34888;34889 34883 8 ATFDAISK Unmodified 851.43888 0.43888309 1027 P15880 RPS2 40S ribosomal protein S2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 35.433 34.298 2 0.006809 37441 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 95.909 55.057 4468500000 40497000 2882600000 21754000 0 88972000 100100000 72241000 83530000 66062000 133240000 236210000 187440000 158750000 169450000 227610000 5091 1027 4616 44166;44167;44168;44169;44170;44171;44172;44173;44174;44175;44176;44177;44178;44179;44180 34890;34891;34892;34893;34894;34895;34896;34897;34898;34899;34900;34901;34902;34903;34904;34905 34898 16 ATFDISLVVPK Unmodified 1188.6754 0.67542497 1771 P55786;A6NEC2 NPEPPS;NPEPPSL1 Puromycin-sensitive aminopeptidase;Puromycin-sensitive aminopeptidase-like protein yes no 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 92.084 85.563 2 0.0060484 108940 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.607 57.456 233200000 39840000 193360000 0 0 0 0 0 0 0 0 0 0 0 0 0 5092 1771 4617 44181;44182 34906;34907 34907 2 ATFDNVTSYLK Unmodified 1257.6241 0.62411768 1791 P57081 WDR4 tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 76.15 75.469 2 0.00026373 87182 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 91.867 65.483 750440000 0 605840000 7988400 0 6099400 8616800 5716100 7185600 6946600 10818000 16624000 18652000 9605000 14747000 31603000 5093 1791 4618 44183;44184;44185;44186;44187;44188;44189;44190;44191;44192;44193;44194;44195;44196 34908;34909;34910;34911;34912;34913;34914;34915;34916;34917;34918;34919;34920;34921;34922;34923 34915 16 ATFGPAIAAVQK Unmodified 1172.6554 0.65535823 37 A8MPP1;Q92771 DDX11L8;DDX12P Putative ATP-dependent RNA helicase DDX11-like protein 8;Putative ATP-dependent RNA helicase DDX12 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.12 2.32 1 7 1 1 1 1 1 1 1 1 63.19 62.638 2 0.0038911 71440 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 59.153 36.082 31940000 0 6923700 0 0 3320000 5482700 3645700 0 2339700 3748300 0 0 2996400 3483900 0 5094 37 4619 44197;44198;44199;44200;44201;44202;44203;44204 34924;34925;34926;34927;34928;34929;34930;34931;34932 34926 9 ATFISVQLK Acetyl (Protein N-term) 1047.5964 0.59644637 3549 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein yes yes 1 0 0 By MS/MS By MS/MS By MS/MS 2 0.535 1 5 1 2 4 1 92.14 89.528 1;2 0.00039275 106919 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.15 100.51 322880000 60265000 261320000 1302800 0 0 0 0 0 0 0 0 0 0 0 0 5095 3549 4620 44205;44206;44207;44208;44209;44210;44211 34933;34934;34935;34936;34937;34938 34933 5 ATFLGLTNEK Unmodified 1092.5815 0.58152458 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.963 63.058 2 6.2771E-08 72218 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 153.08 66.122 280760000 0 0 0 18293000 15195000 26305000 20553000 17198000 11845000 27896000 21113000 30755000 31049000 24745000 35815000 5096 619 4621 44212;44213;44214;44215;44216;44217;44218;44219;44220;44221;44222;44223 34939;34940;34941;34942;34943;34944;34945;34946;34947;34948;34949;34950;34951;34952;34953 34942 14 ATFNPAQDK Unmodified 990.47706 0.47705951 171 O00592 PODXL Podocalyxin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 22.861 23.367 2 0.0080109 24125 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 70.856 44.515 23399000 0 0 0 0 0 0 0 0 0 0 6629700 8811800 7957800 0 0 5097 171 4622 44224;44225;44226 34954 34954 1 ATFSEFAAK Unmodified 970.476 0.47599688 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.502 47.665 2 0.008436 53384 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 69.628 49.073 1950400000 0 0 0 87962000 139130000 136530000 128030000 149270000 116500000 164170000 197810000 306610000 150750000 157800000 215880000 5098 213 4623 44227;44228;44229;44230;44231;44232;44233;44234;44235;44236;44237;44238 34955;34956;34957;34958;34959;34960;34961;34962;34963;34964;34965;34966 34959 11 ATFVSELEAAK Acetyl (Protein N-term) 1206.6132 0.61321864 3760 Q96BN2 TADA1 Transcriptional adapter 1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 91.595 91.229 2 0.0017003 111056 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.029 62.515 81263000 0 46695000 0 1020900 0 3300200 2357100 3102200 0 5216400 3942900 4153600 3186000 2503100 5786300 5099 3760 4624 44239;44240;44241;44242;44243;44244;44245;44246;44247;44248;44249 34967;34968;34969;34970;34971;34972;34973;34974;34975;34976 34970 10 ATFYGEQVDYYK Unmodified 1482.6667 0.66671078 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 64.637 63.291 2 1.8618E-05 72609 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 131.52 119.35 2473900000 33833000 1041700000 15550000 85141000 89052000 148240000 102930000 78990000 104400000 166640000 129760000 131500000 90046000 86789000 169390000 5100 1518 4625 44250;44251;44252;44253;44254;44255;44256;44257;44258;44259;44260;44261;44262;44263;44264;44265 34977;34978;34979;34980;34981;34982;34983;34984;34985;34986;34987;34988;34989;34990;34991 34977 15 ATFYLNVLEQK Unmodified 1324.7027 0.70270235 5267 Q9Y678 COPG1 Coatomer subunit gamma-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 82.47 82.611 2 0.0013097 95283 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.098 75.858 43771000 0 0 0 0 0 3707000 2009500 0 5245900 5845200 3402900 4263500 0 5107000 14190000 5101 5267 4626 44266;44267;44268;44269;44270;44271;44272;44273 34992;34993;34994;34995;34996;34997;34998;34999 34995 8 ATGAALTPTEER Unmodified 1215.6095 0.60953025 2295 Q13459 MYO9B Unconventional myosin-IXb yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 27.725 27.987 2 0.00085814 29105 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.499 44.413 30395000 0 0 0 0 4102900 0 3639600 0 3076600 0 0 5235500 4692900 5266300 4380800 5102 2295 4627 44274;44275;44276;44277;44278;44279;44280 35000;35001;35002 35001 2 ATGAALTPTEERR Unmodified 1371.7106 0.71064128 2295 Q13459 MYO9B Unconventional myosin-IXb yes yes 0 0 1 By MS/MS 10 0 1 1 21.905 21.618 3 0.0017073 22762 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 41.577 17.749 5033500 0 0 0 0 5033500 0 0 0 0 0 0 0 0 0 0 5103 2295 4628 44281 35003 35003 1 ATGADVRDILELGGPEGDAASGTISK Acetyl (Protein N-term) 2541.2558 0.25583993 4550 Q9NPF5 DMAP1 DNA methyltransferase 1-associated protein 1 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.71 3.81 2 1 4 3 1 1 1 1 90.433 88.324 2;3 1.3984E-158 108938 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 246.31 187.99 201680000 0 175170000 0 0 0 0 0 0 0 12704000 0 3424100 0 0 10378000 5104 4550 4629 44282;44283;44284;44285;44286;44287;44288 35004;35005;35006;35007;35008;35009 35006 6 ATGANATPLDFPSK Acetyl (Protein N-term) 1430.7042 0.70415892 2554 Q15637 SF1 Splicing factor 1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.62 3.25 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 79.372 79.9 2 8.1158E-62 86488 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 183.99 173.46 654860000 46542000 82708000 0 24551000 30289000 0 34901000 26636000 32244000 46101000 56362000 59380000 39848000 57344000 117960000 5105 2554 4630 44289;44290;44291;44292;44293;44294;44295;44296;44297;44298;44299;44300;44301 35010;35011;35012;35013;35014;35015;35016;35017;35018;35019;35020;35021;35022 35011 12 ATGANATPLDFPSKK Acetyl (Protein N-term) 1558.7991 0.79912193 2554 Q15637 SF1 Splicing factor 1 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS 4.25 3.34 2 1 1 1 2 1 67.078 62.504 2 2.1919E-102 79565 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 241.31 215.65 240380000 5629500 229990000 0 0 0 0 0 0 0 0 0 0 0 0 4760400 5106 2554 4631 44302;44303;44304;44305 35023;35024;35025;35026;35027;35028 35023 6 ATGEADVEFVTHEDAVAAMSK Oxidation (M) 2192.9896 0.98957783 1308 P31942 HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 63.164 63.728 3 2.6367E-06 72079 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.635 47.557 11976000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11976000 5107 1308 4632 44306;44307 35029;35030 35030 1933 2 ATGEEEGMDIQK Unmodified 1306.5711 0.57109583 3850 Q96GA3 LTV1 Protein LTV1 homolog yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 27.614 28.193 2 2.794E-05 29439 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 114.5 99.83 8438200 0 0 0 0 0 0 0 0 0 0 3391700 0 0 0 5046500 5108 3850 4633 44308;44309 35031 35031 1 ATGEEFVK Unmodified 879.4338 0.43379771 4424 Q9H6T0 ESRP2 Epithelial splicing regulatory protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.83 25.034 2 0.012232 25977 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 75.109 19.433 169540000 0 0 0 10392000 9664000 16347000 11057000 12677000 9528100 15380000 15651000 17381000 15812000 12315000 23333000 5109 4424 4634 44310;44311;44312;44313;44314;44315;44316;44317;44318;44319;44320;44321 35032;35033;35034;35035;35036;35037;35038 35034 7 ATGEGFVEFR Unmodified 1111.5298 0.52982336 4639 Q9NTZ6 RBM12 RNA-binding protein 12 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 59.751 60.041 2 0.01238 67556 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.579 35.803 56022000 0 0 0 0 0 6248700 0 0 0 6742000 5840500 6226900 5940200 8831000 16192000 5110 4639 4635 44322;44323;44324;44325;44326;44327;44328 35039;35040;35041;35042 35041 4 ATGEGFVEFRNEADYK Unmodified 1831.8377 0.83769228 4639 Q9NTZ6 RBM12 RNA-binding protein 12 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.09 3.85 4 7 1 1 2 1 1 1 1 1 1 1 63.178 61.274 3 0.00094377 79852 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.918 40.812 112190000 16737000 25632000 43430000 0 884490 1990900 0 2446200 1707400 3009100 0 0 0 3895400 12455000 5111 4639 4636 44329;44330;44331;44332;44333;44334;44335;44336;44337;44338;44339 35043;35044;35045;35046 35043 2 ATGGGLSSVGGGSSTIK Unmodified 1434.7314 0.7314363 66;779 P04259;CON__P04259 KRT6B Keratin, type II cytoskeletal 6B no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.998 38.179 2 4.726E-38 42370 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 177.42 163.45 + 931830000 0 0 0 118700000 19498000 13975000 41089000 132320000 9544500 33027000 24549000 29318000 469690000 24923000 15192000 5112 779;66 4637 44340;44341;44342;44343;44344;44345;44346;44347;44348;44349;44350;44351 35047;35048;35049;35050;35051;35052;35053;35054;35055;35056;35057;35058 35049 12 ATGGPYGSLGVDYEFEK Unmodified 1788.8206 0.82064524 315 O43301 HSPA12A Heat shock 70 kDa protein 12A yes yes 0 0 0 By MS/MS 2 0 1 1 79.937 75.225 2 1.8853E-75 93651 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 228.7 203.4 97557000 0 97557000 0 0 0 0 0 0 0 0 0 0 0 0 0 5113 315 4638 44352 35059 35059 1 ATGGYRTSSGLGGSTTDFLEEWK Acetyl (Protein N-term) 2461.1397 0.13974754 3885 Q96IZ0 PAWR PRKC apoptosis WT1 regulator protein yes yes 1 0 1 By MS/MS 2 0 1 1 92.151 87.241 3 7.6581E-05 108419 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.171 46.156 24874000 0 24874000 0 0 0 0 0 0 0 0 0 0 0 0 0 5114 3885 4639 44353 35060 35060 1 ATGHARAPSSSSLNSATSSQSK Unmodified 2131.0254 0.025386488 2723 Q5F1R6 DNAJC21 DnaJ homolog subfamily C member 21 yes yes 0 0 1 By MS/MS 2 0 1 1 21.205 16.385 3 3.7752E-26 23556 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 111.66 92.622 31426000 31426000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5115 2723 4640 44354 35061;35062 35061 2 ATGILLYGLASR Unmodified 1233.7081 0.70812208 1528 P47897 QARS Glutamine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.367 82.429 2 0.00016177 94940 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 102.52 55.442 126660000 0 0 0 3429300 4213800 10093000 6221900 8771700 6688900 11408000 9870400 11980000 9008100 13421000 31557000 5116 1528 4641 44355;44356;44357;44358;44359;44360;44361;44362;44363;44364;44365;44366 35063;35064;35065;35066;35067;35068;35069;35070;35071;35072;35073 35066 11 ATGLGPVDRVETTR Unmodified 1470.7791 0.77905519 248 O15067 PFAS Phosphoribosylformylglycinamidine synthase yes yes 0 0 1 By MS/MS 10 0 1 1 42.929 43.672 3 0.0003938 47768 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.394 54.606 20930000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20930000 5117 248 4642 44367 35074 35074 1 ATGLHFR Unmodified 800.42932 0.42932146 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 24.985 25.198 2 0.018132 26820 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 112.56 45.523 629530000 0 0 0 51820000 44586000 83871000 59292000 0 0 79201000 54340000 59629000 55647000 42638000 98510000 5118 1518 4643 44368;44369;44370;44371;44372;44373;44374;44375;44376;44377 35075;35076;35077;35078 35075 4 ATGLPSSLASIPGGK Unmodified 1354.7456 0.7456298 2104 Q04726 TLE3 Transducin-like enhancer protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 72.595 72.695 2 0.00094742 83696 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 78.548 64.341 269670000 0 0 0 13205000 0 24838000 0 0 17497000 45231000 31222000 34605000 25592000 33095000 44385000 5119 2104 4644 44378;44379;44380;44381;44382;44383;44384;44385;44386 35079;35080;35081;35082;35083;35084;35085;35086;35087;35088;35089 35087 8 ATGPEAAGGGGAGGGGGGYRPIIQSPGYK Unmodified 2559.2466 0.24661265 4999 Q9ULL5 PRR12 Proline-rich protein 12 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 2 1 1 1 1 1 1 56.391 56.521 3 1.8437E-43 63570 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.982 82.911 104050000 0 0 0 4470600 4126000 0 7144800 8369000 6095700 13886000 12205000 11521000 11218000 8659000 16356000 5120 4999 4645 44387;44388;44389;44390;44391;44392;44393;44394;44395;44396;44397;44398 35090;35091;35092;35093;35094;35095;35096;35097;35098;35099;35100;35101 35092 12 ATGPLEAQALVK Unmodified 1196.6765 0.6764876 2962 Q6PL24 TMED8 Protein TMED8 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 65.784 60.984 2 0.0080265 78001 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.595 47.28 191360000 0 189460000 1902900 0 0 0 0 0 0 0 0 0 0 0 0 5121 2962 4646 44399;44400;44401 35102;35103 35102 2 ATGPPSQNSNIGTGR Unmodified 1455.7066 0.70661853 4968 Q9UKJ3 GPATCH8 G patch domain-containing protein 8 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 21.576 22.06 2 0.0029508 21926 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 58.674 27.18 12558000 0 0 0 0 0 0 0 0 0 0 0 0 0 5115700 7442600 5122 4968 4647 44402;44403 35104 35104 1 ATGPPVSELITK Unmodified 1211.6762 0.67615325 1037 P16401 HIST1H1B Histone H1.5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.45 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65.781 65.164 2 0.0077599 74805 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 69.786 45.936 696660000 298840 15787000 0 40813000 34522000 35134000 35207000 32790000 27898000 54250000 74155000 100120000 67778000 68905000 109000000 5123 1037 4648 44404;44405;44406;44407;44408;44409;44410;44411;44412;44413;44414;44415;44416;44417 35105;35106;35107;35108;35109;35110;35111 35108 3 ATGPVLISTADFEGPMPSAPPEAESPLASTSK Oxidation (M) 3170.5329 0.532926 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 86.742 86.793 3 6.6038E-21 100829 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 51.9 49.618 30918000 0 0 0 0 6370400 0 0 0 0 0 9823100 11653000 3072100 0 0 5124 3443 4649 44418;44419;44420;44421 35112;35113;35114;35115 35114 4981 4 ATGSPVSIFVYDVKPGAEEQTQVAK Unmodified 2620.3384 0.33844735 3907 Q96KG9 SCYL1 N-terminal kinase-like protein yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 82.378 81.728 3 3.8951E-41 94246 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 100.44 93.645 377770000 0 45930000 2246100 4137600 14240000 36869000 19220000 24839000 21844000 72130000 27297000 29204000 14973000 19539000 45308000 5125 3907 4650 44422;44423;44424;44425;44426;44427;44428;44429;44430;44431;44432;44433;44434;44435;44436 35116;35117;35118;35119;35120;35121;35122;35123;35124;35125;35126;35127;35128;35129;35130;35131;35132;35133;35134;35135 35130 19 ATGSYIAGTNGNSNGLVPMLR Oxidation (M) 2108.0321 0.03205177 1171 P23921 RRM1 Ribonucleoside-diphosphate reductase large subunit yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 74.979 75.076 2 3.5524E-28 86543 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 99.011 87.034 73792000 0 0 0 2275300 0 7111700 5533700 5077800 4317400 8399500 7425400 8250500 5720000 7044100 12636000 5126 1171 4651 44437;44438;44439;44440;44441;44442;44443;44444;44445;44446;44447 35136;35137;35138;35139;35140;35141;35142;35143;35144 35136 1689 9 ATGSYIAGTNGNSNGLVPMLR Unmodified 2092.0371 0.037137148 1171 P23921 RRM1 Ribonucleoside-diphosphate reductase large subunit yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 80.573 80.723 2 3.5111E-47 92994 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 151.74 130.89 28151000 0 0 0 0 0 0 0 3062200 0 0 0 5283100 1598700 3549100 14658000 5127 1171 4651 44448;44449;44450;44451;44452 35145;35146;35147 35145 3 ATGYLELSNWPEVAPDPSVR Unmodified 2200.08 0.08004782 128 O00203 AP3B1 AP-3 complex subunit beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 5 2 1 2 88.65 88.772 2;3 4.917E-05 102939 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 67.93 55.37 18236000 0 0 0 0 0 0 0 0 0 8361500 0 0 0 1113600 8760900 5128 128 4652 44453;44454;44455;44456;44457 35148;35149;35150 35149 3 ATGYPLAFIAAK Unmodified 1221.6758 0.67575932 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 83.968 82.755 2 0.0059278 95837 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 65.305 61.709 370210000 109180000 164760000 0 3054100 4617900 5699600 5821700 0 3024600 9024200 8504200 0 10622000 15544000 30358000 5129 1300 4653 44458;44459;44460;44461;44462;44463;44464;44465;44466;44467;44468;44469;44470;44471 35151;35152;35153;35154;35155;35156 35152 6 ATGYPLAYVAAK Unmodified 1223.655 0.65502388 1224 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 73.577 67.871 2 0.023175 83860 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 53.089 40.882 40567000 35137000 0 5429600 0 0 0 0 0 0 0 0 0 0 0 0 5130 1224 4654 44472;44473 35157;35158 35158 1 ATHDEAINVLR Unmodified 1237.6415 0.64149908 568 O75970 MPDZ Multiple PDZ domain protein yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 40.594 40.717 3 0.0050645 45223 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 41.399 25.262 41079000 0 0 0 3186800 1882500 3287400 3395600 0 2750900 4333700 5552200 5813900 5173000 5703000 0 5131 568 4655 44474;44475;44476;44477;44478;44479;44480;44481;44482;44483 35159;35160;35161 35159 3 ATIAGGGVIPHIHK Unmodified 1369.783 0.78301836 898 P0C0S5;Q71UI9 H2AFZ;H2AFV Histone H2A.Z;Histone H2A.V yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.021 49.179 3 0.0016527 54104 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.511 32.453 685210000 0 0 0 45922000 16314000 61957000 42371000 40890000 57546000 53248000 46075000 119520000 45826000 41942000 113600000 5132 898 4656 44484;44485;44486;44487;44488;44489;44490;44491;44492;44493;44494;44495 35162;35163;35164;35165;35166 35163 5 ATIDPELNEIHVLSGLSK Unmodified 1935.0313 0.031306714 4988 Q9UL63 MKLN1 Muskelin yes yes 0 0 0 By MS/MS 2 0 1 1 90.929 86.033 3 0.00011741 106929 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 56.081 47.289 13442000 0 13442000 0 0 0 0 0 0 0 0 0 0 0 0 0 5133 4988 4657 44496 35167 35167 1 ATIEDILFK Unmodified 1048.5805 0.58046195 2352 Q6P1K8;Q13888 GTF2H2C;GTF2H2 General transcription factor IIH subunit 2-like protein;General transcription factor IIH subunit 2 yes no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 86.144 85.438 2 0.01494 106758 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.548 55.811 41122000 0 22976000 1590500 0 0 0 0 0 2122300 2177800 2455800 1570000 1410300 2613700 4204900 5134 2352 4658 44497;44498;44499;44500;44501;44502;44503;44504;44505 35168;35169 35168 2 ATIEEIAHQIIEQQMGEIVTEQQTGQK Acetyl (Protein N-term) 3093.5288 0.52884367 976 P13056 NR2C1 Nuclear receptor subfamily 2 group C member 1 yes yes 1 0 0 By MS/MS 2 0 1 1 104.06 99.315 3 4.2477E-07 122649 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 52.329 46.102 4758300 0 4758300 0 0 0 0 0 0 0 0 0 0 0 0 0 5135 976 4659 44506 35170 35170 1 ATIENLQENQK Unmodified 1286.6466 0.64664404 672 O95613 PCNT Pericentrin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 29.74 29.539 2 0.0016988 37182 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.62 69.729 3727800 0 0 0 0 1513600 2214200 0 0 0 0 0 0 0 0 0 5136 672 4660 44507;44508;44509;44510 35171;35172;35173 35173 3 ATIEQFMK Unmodified 966.48445 0.48445308 4070 Q99933 BAG1 BAG family molecular chaperone regulator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.4 3.68 4 1 10 1 3 1 1 1 1 1 1 1 1 1 1 1 60.827 58.957 1;2 0.012141 72996 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 102.72 88.944 572350000 14070000 453670000 9381100 1760400 6273100 3164600 9254900 0 7072700 11291000 16468000 15906000 12217000 11816000 0 5137 4070 4661 44511;44512;44513;44514;44515;44516;44517;44518;44519;44520;44521;44522;44523;44524;44525 35174;35175;35176;35177;35178;35179;35180;35181;35182;35183;35184;35185 35179 12 ATIEQFMK Oxidation (M) 982.47937 0.4793677 4070 Q99933 BAG1 BAG family molecular chaperone regulator 1 yes yes 0 1 0 By matching By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 39.583 34.622 2 0.015877 43049 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 88.942 67.678 147230000 7839800 132040000 7346300 0 0 0 0 0 0 0 0 0 0 0 0 5138 4070 4661 44526;44527;44528;44529 35186;35187;35188;35189;35190 35189 5576 5 ATIFNLK Unmodified 805.46979 0.46978929 4242 Q9BY44 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 62.281 61.957 2 0.031598 78385 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 88.734 55.043 98842000 0 0 47210000 0 0 0 0 0 0 0 8338300 9670500 8332800 7560300 17729000 5139 4242 4662 44530;44531;44532;44533;44534;44535 35191;35192;35193 35191 3 ATIGADFLTK Unmodified 1035.5601 0.56006086 1647 P51149 RAB7A Ras-related protein Rab-7a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 2 1 1 1 1 73.12 67.807 2 0.019391 88781 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.157 43.197 108630000 49850000 32483000 26295000 0 0 0 0 0 0 0 0 0 0 0 0 5140 1647 4663 44536;44537;44538 35194;35195;35196 35195 1 ATIISEQQAK Unmodified 1087.5873 0.58733824 1669;1450 P42229;P51692 STAT5A;STAT5B Signal transducer and activator of transcription 5A;Signal transducer and activator of transcription 5B no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.64 2.9 1 1 9 2 1 1 1 1 1 1 1 1 1 26.15 25.569 2 0.0033466 27333 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 76.825 40.698 212710000 0 115330000 0 0 5263300 13601000 9177100 0 0 12060000 11643000 11307000 9891400 9060600 15384000 5141 1450;1669 4664 44539;44540;44541;44542;44543;44544;44545;44546;44547;44548;44549 35197;35198;35199;35200 35197 2 ATILCTSYVQFK Unmodified 1429.7275 0.72753689 1346 P35244 RPA3 Replication protein A 14 kDa subunit yes yes 0 0 0 By MS/MS 2 0 1 1 82.987 74.856 2 0.0018417 97834 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.807 36.826 27673000 27673000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5142 1346 4665 44550 35201 35201 1 ATILDLSCNK Unmodified 1133.5751 0.575059 3738 Q96AG4 LRRC59 Leucine-rich repeat-containing protein 59 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 58.462 58.82 2 0.023694 66269 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 45.368 30.833 16596000 0 0 0 0 0 0 0 0 0 5045500 5095000 6455100 0 0 0 5143 3738 4666 44551;44552;44553 35202;35203;35204 35204 3 ATIQGVLR Unmodified 856.51305 0.51305109 689 O95782 AP2A1 AP-2 complex subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.89 44.063 2 0.025458 49713 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 58.679 35.659 249740000 0 0 0 16785000 12962000 15846000 19863000 15638000 16334000 22334000 24693000 31154000 18569000 19659000 35908000 5144 689 4667 44554;44555;44556;44557;44558;44559;44560;44561;44562;44563;44564;44565 35205;35206;35207;35208 35205 4 ATISDEEIER Unmodified 1161.5513 0.55134667 5072 Q9UQN3 CHMP2B Charged multivesicular body protein 2b yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 35.146 35.01 2 0.010212 39018 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 66.692 55.47 33838000 0 0 0 6574000 5466300 8660000 8247400 4890400 0 0 0 0 0 0 0 5145 5072 4668 44566;44567;44568;44569;44570 35209;35210 35210 2 ATISDEEIERQLK Unmodified 1530.789 0.78895118 5072 Q9UQN3 CHMP2B Charged multivesicular body protein 2b yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 60.774 55.953 3 0.00099983 68610 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 80.318 62.732 75863000 0 71246000 4616500 0 0 0 0 0 0 0 0 0 0 0 0 5146 5072 4669 44571;44572;44573 35211;35212;35213 35212 3 ATISNDGATILK Unmodified 1202.6507 0.65066678 4065 Q99832 CCT7 T-complex protein 1 subunit eta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.57 3.97 1 7 1 12 3 4 2 1 1 1 1 1 1 1 1 1 1 1 1 52.823 51.814 2 1.9226E-43 55542 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 182.64 129.92 10522000000 232010000 4267000000 50628000 293800000 274500000 458290000 370640000 376680000 468840000 552120000 706480000 743340000 495180000 436940000 796020000 5147 4065 4670 44574;44575;44576;44577;44578;44579;44580;44581;44582;44583;44584;44585;44586;44587;44588;44589;44590;44591;44592;44593;44594 35214;35215;35216;35217;35218;35219;35220;35221;35222;35223;35224;35225;35226;35227;35228;35229;35230;35231;35232;35233;35234;35235;35236;35237 35214 18 ATITEEAYQK Unmodified 1152.5663 0.56626845 2159 Q08499 PDE4D cAMP-specific 3',5'-cyclic phosphodiesterase 4D yes yes 0 0 0 By MS/MS By MS/MS 2.67 0.471 1 2 1 2 32.611 27.916 2 9.8409E-06 36616 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 156.75 144.23 90619000 182800 90436000 0 0 0 0 0 0 0 0 0 0 0 0 0 5148 2159 4671 44595;44596;44597 35238 35238 1 ATLALDSVLTEEGK Unmodified 1445.7613 0.76133944 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.24 2 1 10 2 1 1 1 1 1 1 1 1 1 1 1 80.01 79.278 2 2.9181E-16 91777 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 119.45 100.21 349830000 0 210150000 3728800 0 8713600 11741000 11856000 0 9953600 24946000 14074000 17608000 13491000 10411000 13155000 5149 2193 4672 44598;44599;44600;44601;44602;44603;44604;44605;44606;44607;44608;44609;44610 35239;35240;35241;35242;35243;35244;35245;35246;35247;35248;35249;35250;35251;35252;35253 35252 15 ATLDVFFVPLK Unmodified 1248.7118 0.71181048 4733 Q9NXV6 CDKN2AIP CDKN2A-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 93.847 93.922 2 0.00031961 108344 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 89.355 82.134 36677000 0 0 0 736710 1361300 3662200 1954900 1881100 2971300 4607700 3819900 3209500 1573200 3216400 7683100 5150 4733 4673 44611;44612;44613;44614;44615;44616;44617;44618;44619;44620;44621;44622 35254;35255;35256;35257;35258;35259;35260 35258 7 ATLEIKDPVVQIK Unmodified 1452.8552 0.85518025 3193 Q86XA9 HEATR5A HEAT repeat-containing protein 5A yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 77.106 72.94 3 0.0010117 91599 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.204 68.772 29356000 0 29356000 0 0 0 0 0 0 0 0 0 0 0 0 0 5151 3193 4674 44623;44624 35261;35262 35261 2 ATLELTHNWGTEDDETQSYHNGNSDPR Unmodified 3086.3238 0.32381293 2106 Q04760 GLO1 Lactoylglutathione lyase yes yes 0 0 0 By MS/MS 10 0 1 1 59.319 59.912 4 0.016922 67522 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 18.107 16.077 13052000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13052000 5152 2106 4675 44625 35263 35263 1 ATLENDFVVLK Unmodified 1247.6762 0.67615325 100 CON__Q7RTT2;CON__Q8N1N4-2;Q8N1N4 KRT78 Keratin, type II cytoskeletal 78 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.219 78.279 2 3.1846E-05 89987 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 117.89 94.461 + 690440000 0 0 0 135100000 35718000 54035000 32196000 99260000 36181000 73503000 53437000 51965000 56516000 37318000 25218000 5153 100 4676 44626;44627;44628;44629;44630;44631;44632;44633;44634;44635;44636;44637 35264;35265;35266;35267;35268;35269;35270;35271;35272;35273;35274;35275;35276 35268 7 ATLENDFVVLKK Unmodified 1375.7711 0.77111627 100 CON__Q7RTT2;CON__Q8N1N4-2;Q8N1N4 KRT78 Keratin, type II cytoskeletal 78 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 67.597 67.639 3 0.010598 77024 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 36.447 27.934 + 160320000 0 0 0 29496000 7920900 5027100 12445000 45399000 4998400 9459500 10320000 22803000 6807100 5648600 0 5154 100 4677 44638;44639;44640;44641;44642;44643;44644;44645;44646;44647;44648 35277;35278;35279;35280;35281;35282 35282 5 ATLEQDSAK Unmodified 961.47164 0.47163978 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 0 By MS/MS 2 0 1 1 9.982 6.7173 2 0.043309 9483 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 59.597 32.467 12850000 0 12850000 0 0 0 0 0 0 0 0 0 0 0 0 0 5155 2495 4678 44649 35283 35283 1 ATLEVSSIIK Unmodified 1059.6176 0.61757574 4534 Q9NP61 ARFGAP3 ADP-ribosylation factor GTPase-activating protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.071 72.142 2 0.0093306 81944 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 57.96 33.805 130220000 0 0 0 4327400 6607200 12276000 9484300 9997800 9480600 11736000 16482000 11533000 9716700 9052100 19530000 5156 4534 4679 44650;44651;44652;44653;44654;44655;44656;44657;44658;44659;44660;44661 35284;35285;35286;35287;35288;35289;35290;35291;35292;35293;35294;35295 35291 12 ATLGPTPTTPPQPPDPSQPPPGPMQH Unmodified 2642.2799 0.27988661 447 O60927 PPP1R11 Protein phosphatase 1 regulatory subunit 11 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 73.672 73.892 3 0.00023815 84686 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 30.976 23.875 17083000 0 0 0 0 0 0 0 0 0 5734000 0 0 0 0 11349000 5157 447 4680 44662;44663 35296 35296 1 ATLIEANRAK Unmodified 1085.6193 0.61930707 664 O95466 FMNL1 Formin-like protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 25.217 20.139 2 0.018011 28431 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 99.136 54.688 12060000 12060000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5158 664 4681 44664 35297 35297 1 ATLITITNNIGSIAR Unmodified 1556.8886 0.88860564 4257 Q9BZ23 PANK2 Pantothenate kinase 2, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 84.327 84.376 2 4.1189E-27 97699 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 134.2 123.82 46518000 0 0 0 0 8663200 6744800 0 0 0 9572400 6371600 15166000 0 0 0 5159 4257 4682 44665;44666;44667;44668;44669 35298;35299;35300;35301;35302;35303;35304 35300 7 ATLIYVDK Acetyl (Protein N-term) 963.5277 0.5276981 709 O95997;Q9NZH5;Q9NZH4 PTTG1;PTTG2;PTTG3P Securin;Securin-2;Putative pituitary tumor-transforming gene 3 protein yes no 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.25 2.49 1 11 1 1 1 1 1 1 1 1 1 1 1 1 79.983 80.464 2 0.0054927 89876 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.351 45.869 151690000 10240000 0 0 8352000 8455400 6532900 12123000 0 11126000 16506000 18311000 14143000 12356000 12476000 21068000 5160 709 4683 44670;44671;44672;44673;44674;44675;44676;44677;44678;44679;44680;44681 35305;35306;35307;35308;35309;35310;35311;35312;35313;35314;35315;35316 35305 12 ATLLEDQQDPSPSS Unmodified 1486.6787 0.67873203 4505 Q9HC35 EML4 Echinoderm microtubule-associated protein-like 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.35 1 5 1 1 1 1 1 1 58.26 59.103 2 1.4196E-11 54959 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 99.53 88.366 54054000 3490900 0 0 7094100 7320300 0 8809000 0 0 10454000 0 0 0 0 16885000 5161 4505 4684 44682;44683;44684;44685;44686;44687 35317;35318;35319;35320 35319 4 ATLLQQR Unmodified 828.48175 0.48175096 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 25.809 25.901 2 0.023327 27592 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 91.14 47.679 60818000 0 0 0 6261700 5093400 7951900 8359100 0 6039600 0 10335000 0 9938700 6839000 0 5162 1492 4685 44688;44689;44690;44691;44692;44693;44694;44695 35321;35322;35323 35322 3 ATLLSLR Unmodified 772.48069 0.48068833 2823 Q5VW36 FOCAD Focadhesin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.634 58.748 2 0.016355 67918 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 116.11 46.683 139540000 0 0 0 12957000 12044000 13524000 13669000 9049900 8467900 15253000 13632000 19133000 6999900 5827200 8983700 5163 2823 4686 44696;44697;44698;44699;44700;44701;44702;44703;44704;44705;44706;44707 35324;35325;35326;35327;35328;35329;35330;35331;35332 35332 9 ATLPAEPSAGPAAGGEAVAAAAATEEEEEEAR Acetyl (Protein N-term) 3064.4109 0.41089661 3309 Q8N196 SIX5 Homeobox protein SIX5 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 86.864 86.94 3 2.0113E-30 100883 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 67.69 63.33 20851000 0 0 0 0 4214900 0 0 0 0 4336100 2819700 4143900 0 0 5336300 5164 3309 4687 44708;44709;44710;44711;44712 35333;35334;35335;35336;35337;35338;35339 35333 7 ATLPDADK Unmodified 829.41815 0.41814765 971 P12814 ACTN1 Alpha-actinin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 9 2.45 1 6 1 1 1 1 1 1 1 18.85 18.656 2 0.013814 18731 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 71.491 54.198 146620000 0 3882600 0 0 0 0 0 0 0 11789000 23637000 25743000 11145000 17625000 52796000 5165 971 4688 44713;44714;44715;44716;44717;44718;44719 35340;35341;35342;35343;35344 35343 4 ATLPSPDK Unmodified 827.43888 0.43888309 1137 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.72 1 3 1 11 2 2 1 1 1 1 1 1 1 1 1 1 1 1 24.719 23.738 2 0.011707 30639 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.46 82.119 1105100000 75566000 683960000 7798800 10948000 8594100 23744000 12837000 0 11632000 28477000 39468000 35492000 20459000 38997000 107080000 5166 1137 4689 44720;44721;44722;44723;44724;44725;44726;44727;44728;44729;44730;44731;44732;44733;44734;44735 35345;35346;35347;35348;35349;35350;35351;35352;35353 35347 6 ATLPSPDKLPGFK Unmodified 1369.7606 0.76055158 1137 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 72.86 71.546 3 0.0010184 91326 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.298 43.673 507640000 137510000 163480000 19017000 11471000 6339200 2616500 15303000 10650000 2930400 13538000 24108000 36236000 10973000 15566000 37905000 5167 1137 4690 44736;44737;44738;44739;44740;44741;44742;44743;44744;44745;44746;44747;44748;44749;44750;44751;44752 35354;35355;35356;35357;35358;35359;35360;35361;35362;35363;35364;35365 35356 12 ATLQEILPEVLK Unmodified 1352.7915 0.79151736 4096 Q9BQG0 MYBBP1A Myb-binding protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.86 3.4 1 1 5 2 1 1 1 1 1 92.66 91.619 2 0.014168 114190 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 59.542 41.678 42067000 0 33792000 0 0 0 0 0 0 599110 2744300 942180 0 0 1170100 2819400 5168 4096 4691 44753;44754;44755;44756;44757;44758;44759 35366;35367 35366 2 ATLQPEYSDK Unmodified 1150.5506 0.55061839 895 P09884 POLA1 DNA polymerase alpha catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By matching 2 0 3 1 1 1 32.16 27.571 2 0.01929 36198 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.224 47.189 65626000 8095200 56932000 598150 0 0 0 0 0 0 0 0 0 0 0 0 5169 895 4692 44760;44761;44762 35368 35368 1 ATLSLTVNSGDPPLGALLAVEHVK Acetyl (Protein N-term) 2443.3322 0.33223976 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 1 0 0 By MS/MS By MS/MS 2 0 2 1 1 100.43 94.009 2;3 1.5293E-68 118534 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 176.04 171.41 29109000 15224000 13885000 0 0 0 0 0 0 0 0 0 0 0 0 0 5170 848 4693 44763;44764 35369;35370 35369 2 ATLSLTVNSGDPPLGALLAVEHVKDDVSISVEEGK Acetyl (Protein N-term) 3601.8727 0.87268739 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 1 0 1 By MS/MS 2 0 1 1 100.55 92.424 3 5.2538E-81 119057 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 118.86 115.1 13472000 13472000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5171 848 4694 44765 35371 35371 1 ATLVESSTSGFTPGGGGSSVSMIASR Oxidation (M) 2458.1646 0.16458209 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 1 0 By MS/MS 10 0 1 1 72.818 73.188 3 8.9557E-16 83748 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.657 60.97 30396000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30396000 5172 1564 4695 44766 35372 35372 2483 1 ATLVLNSLQDFQPELFGLPSYE Unmodified 2480.2475 0.24750708 2161 Q08623 HDHD1 Pseudouridine-5'-phosphatase yes yes 0 0 0 By MS/MS 2 0 1 1 101.9 97.184 2 0.00075541 120085 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98 86.084 20403000 0 20403000 0 0 0 0 0 0 0 0 0 0 0 0 0 5173 2161 4696 44767 35373 35373 1 ATLVPQVQPSTSAWTTNFDK Unmodified 2190.0957 0.095697884 3935 Q96NB3 ZNF830 Zinc finger protein 830 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 86.804 82.789 2 4.9129E-08 102999 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.76 98.268 17678000 0 17678000 0 0 0 0 0 0 0 0 0 0 0 0 0 5174 3935 4697 44768;44769 35374 35374 1 ATLVTITNNIGSIAR Unmodified 1542.873 0.87295558 3511 Q8TE04 PANK1 Pantothenate kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 81.822 81.789 2 8.0339E-23 94604 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 119.76 106.41 61587000 0 0 0 2999900 12687000 11917000 0 0 0 10261000 9402600 14319000 0 0 0 5175 3511 4698 44770;44771;44772;44773;44774;44775 35375;35376;35377;35378;35379;35380;35381 35381 7 ATLVTITNNIGSVAR Unmodified 1528.8573 0.85730551 4466 Q9H999 PANK3 Pantothenate kinase 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 77.975 77.928 2 7.9477E-19 89976 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 138.63 121.6 334970000 0 0 0 18539000 73491000 59679000 0 0 0 56263000 48767000 78234000 0 0 0 5176 4466 4699 44776;44777;44778;44779;44780;44781 35382;35383;35384;35385;35386;35387 35382 6 ATLWYVPLSLK Unmodified 1289.7384 0.73835958 120 O00154 ACOT7 Cytosolic acyl coenzyme A thioester hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 92.413 91.727 2 0.00063009 106736 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 78.939 66.703 353540000 26520000 0 0 10050000 30573000 84108000 552680 904470 0 64822000 57197000 72857000 0 714220 5243400 5177 120 4700 44782;44783;44784;44785;44786;44787;44788;44789;44790;44791;44792 35388;35389;35390;35391;35392;35393 35389 6 ATLYVTAIEDR Unmodified 1250.6507 0.65066678 4069 Q99873 PRMT1 Protein arginine N-methyltransferase 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 67.561 67.629 2 0.00034835 77555 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 97.277 85.43 95871000 0 0 0 2807400 2700200 6405800 3297600 0 2819400 0 14145000 11536000 3262700 12312000 36585000 5178 4069 4701 44793;44794;44795;44796;44797;44798;44799;44800;44801;44802 35394;35395;35396;35397;35398;35399;35400 35397 7 ATMAQPLVFSK Oxidation (M) 1207.6271 0.62709457 2429 Q14678 KANK1 KN motif and ankyrin repeat domain-containing protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 52.063 52.047 2 0.00194 58743 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 65.347 53.499 31278000 0 0 0 3943400 4145600 0 0 0 0 5242100 7112000 0 5928600 4906500 0 5179 2429 4702 44803;44804;44805;44806;44807;44808 35401;35402;35403 35401 3989 3 ATMAQPLVFSK Unmodified 1191.6322 0.63217995 2429 Q14678 KANK1 KN motif and ankyrin repeat domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.485 65.573 2 0.0069525 75075 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 70.399 44.662 61086000 0 0 0 2703000 2935900 3723700 3216100 3085600 3007700 5587300 11705000 5092700 5983100 5223000 8822400 5180 2429 4702 44809;44810;44811;44812;44813;44814;44815;44816;44817;44818;44819;44820 35404;35405;35406;35407 35406 2 ATMEAYSR Oxidation (M) 943.40693 0.40693104 1100 P20073 ANXA7 Annexin A7 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 7.5773 7.6985 2 0.012849 5875 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 63.565 44.834 57468000 0 0 0 2455600 1777700 4834900 3895600 2987300 2328500 7587100 12375000 6478000 0 5485300 7263100 5181 1100 4703 44821;44822;44823;44824;44825;44826;44827;44828;44829;44830;44831 35408;35409;35410 35409 1578 3 ATMQGDREQLK Unmodified 1275.6241 0.62413446 4371 Q9H2P0 ADNP Activity-dependent neuroprotector homeobox protein yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 13.911 14.059 3 0.0094152 13179 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 38.634 30.6 60499000 0 0 0 4873400 4484300 0 4216000 4268600 3614100 7111600 0 8586200 7817000 5014100 10514000 5182 4371 4704 44832;44833;44834;44835;44836;44837;44838;44839;44840;44841 35411;35412;35413;35414;35415;35416 35414 6 ATMQNLNDR Oxidation (M) 1077.4873 0.48730662 84;106 CON__Q04695;Q04695;Q9C075;CON__Q9C075;CON__Q99PS0 KRT17;KRT23 Keratin, type I cytoskeletal 17;Keratin, type I cytoskeletal 23 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 7.7159 7.8414 2 0.00090018 6017 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 130.75 114.54 + 282390000 0 0 0 45978000 14225000 9627700 0 22011000 9991700 25099000 33400000 29793000 84347000 0 7917500 5183 84;106 4705 44842;44843;44844;44845;44846;44847;44848;44849;44850;44851;44852 35417;35418;35419;35420;35421;35422;35423 35422 120;140 5 ATMQNLNDR Unmodified 1061.4924 0.492392 84;106 CON__Q04695;Q04695;Q9C075;CON__Q9C075;CON__Q99PS0 KRT17;KRT23 Keratin, type I cytoskeletal 17;Keratin, type I cytoskeletal 23 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.567 19.768 2 0.0020722 20565 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 128.69 117.81 + 678920000 0 0 0 160550000 28566000 29056000 31576000 47043000 15535000 47620000 46774000 50083000 181810000 17821000 22486000 5184 84;106 4705 44853;44854;44855;44856;44857;44858;44859;44860;44861;44862;44863;44864 35424;35425;35426;35427;35428;35429;35430;35431;35432;35433;35434;35435 35434 5 ATMQNLNDRLASYLDK Oxidation (M) 1867.9098 0.90981137 84 CON__Q04695;Q04695 KRT17 Keratin, type I cytoskeletal 17 no no 0 1 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 69.891 70.122 3 0.00059374 81135 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 50.188 38.546 + 39806000 0 0 0 0 0 3988700 0 0 0 0 4734400 7305400 16894000 3770800 3112800 5185 84 4706 44865;44866;44867;44868;44869;44870 35436 35436 120 1 ATNAGPLDK Unmodified 885.4556 0.45559579 2558 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 13.738 13.927 2 0.017806 12496 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.37 25.994 27061000 0 0 0 1854100 0 0 2589600 2529400 2408000 0 0 4727100 3568400 3783900 5600100 5186 2558 4707 44871;44872;44873;44874;44875;44876;44877;44878 35437;35438;35439;35440 35438 4 ATNAQFDSPEILR Unmodified 1460.726 0.72595699 3787 Q96CW5 TUBGCP3 Gamma-tubulin complex component 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.585 65.672 2 7.1425E-08 75516 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 98.898 72.384 120600000 0 0 0 6330700 7932800 7845100 8815200 8465800 5988700 11814000 14981000 13084000 7985300 10401000 16955000 5187 3787 4708 44879;44880;44881;44882;44883;44884;44885;44886;44887;44888;44889;44890 35441;35442;35443;35444;35445;35446;35447;35448;35449;35450;35451;35452 35447 12 ATNAQFDSPEILRR Unmodified 1616.8271 0.82706802 3787 Q96CW5 TUBGCP3 Gamma-tubulin complex component 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 56.772 56.979 3 0.0010388 64002 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 39.005 19.4 10938000 0 0 0 0 0 0 0 0 0 0 0 0 4577100 6360500 0 5188 3787 4709 44891;44892;44893 35453;35454 35453 2 ATNDEIFSILK Unmodified 1249.6554 0.65541781 2170 Q09161 NCBP1 Nuclear cap-binding protein subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 89.289 84.135 2 0.011827 105683 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.662 55.171 833240000 26451000 788150000 18640000 0 0 0 0 0 0 0 0 0 0 0 0 5189 2170 4710 44894;44895;44896 35455;35456;35457 35455 3 ATNESEDEIPQLVPIGK Unmodified 1838.9262 0.92617294 571 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.579 80.639 2 1.293E-09 92902 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.38 101.38 112770000 0 0 0 4117200 6124900 7766000 6168100 6087200 6427300 10178000 10672000 14548000 11399000 11126000 18158000 5190 571 4711 44897;44898;44899;44900;44901;44902;44903;44904;44905;44906;44907;44908 35458;35459;35460;35461;35462;35463;35464;35465;35466;35467;35468;35469 35461 12 ATNFLAHEK Acetyl (Protein N-term) 1071.5349 0.53490874 1255 P29692 EEF1D Elongation factor 1-delta yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.8 3.93 1 8 1 15 2 5 3 1 1 1 1 1 2 1 2 2 1 1 1 59.076 57.875 2 2.4844E-07 68854 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 171.56 141.38 11603000000 794290000 7495100000 356680000 104630000 105260000 167250000 141540000 134760000 100530000 230830000 389230000 420310000 199780000 235800000 726950000 5191 1255 4712 44909;44910;44911;44912;44913;44914;44915;44916;44917;44918;44919;44920;44921;44922;44923;44924;44925;44926;44927;44928;44929;44930;44931;44932;44933 35470;35471;35472;35473;35474;35475;35476;35477;35478;35479;35480;35481;35482;35483;35484;35485;35486;35487;35488;35489;35490;35491;35492;35493;35494;35495;35496;35497;35498;35499;35500;35501;35502 35486 33 ATNHNLHITEK Unmodified 1276.6524 0.65239812 4886 Q9UGP5 POLL DNA polymerase lambda yes yes 0 0 0 By MS/MS 2 0 2 2 19.26 14.675 2;3 0.019367 21320 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.04 55.04 28473000 28473000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5192 4886 4713 44934;44935 35503;35504 35504 1 ATNIEQIFR Acetyl (Protein N-term) 1132.5877 0.58767259 1074 P18583 SON Protein SON yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 88.692 88.753 2 0.0030522 102981 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 66.692 51.916 27904000 0 0 0 1261400 1953500 0 1496500 2297800 0 3231000 2842400 4343700 2618700 2964600 4894700 5193 1074 4714 44936;44937;44938;44939;44940;44941;44942;44943;44944;44945 35505;35506;35507;35508;35509 35505 5 ATNLCFAER Unmodified 1080.5022 0.50222841 3663 Q92797 SYMPK Symplekin yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 43.09 43.351 2 0.043635 48643 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 43.635 30.368 19028000 0 0 0 0 0 0 5474400 0 0 0 6280900 0 0 7273000 0 5194 3663 4715 44946;44947;44948 35510 35510 1 ATNLTRETK Unmodified 1032.5564 0.55637247 1638 P50851 LRBA Lipopolysaccharide-responsive and beige-like anchor protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 8.4213 5.3835 2 2.0096E-05 7123 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 169.44 102.27 148800000 100590000 15297000 32915000 0 0 0 0 0 0 0 0 0 0 0 0 5195 1638 4716 44949;44950;44951 35511;35512;35513 35513 3 ATNMEFAVK Unmodified 1009.4903 0.49026674 1672 P51812 RPS6KA3 Ribosomal protein S6 kinase alpha-3 yes yes 0 0 0 By MS/MS 2 0 1 1 51.594 45.847 2 0.024367 59576 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.114 66.008 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5196 1672 4717 44952 35514 35514 1 ATNMEYAVK Unmodified 1025.4852 0.48518136 2531 Q15418 RPS6KA1 Ribosomal protein S6 kinase alpha-1 yes yes 0 0 0 By MS/MS By MS/MS 2.67 0.471 1 2 1 2 33.311 28.565 2 0.0054876 37968 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 141.52 22.112 148200000 568620 147630000 0 0 0 0 0 0 0 0 0 0 0 0 0 5197 2531 4718 44953;44954;44955 35515 35515 0 ATNVCTRFEDSPSYVK Unmodified 1872.8676 0.8676122 389 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS 6.8 3.92 2 3 1 1 1 1 1 52.012 49.894 3 0.0031493 55328 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.947 38.307 67960000 9539100 0 25937000 0 0 0 12466000 0 0 0 0 9828800 0 0 10190000 5198 389 4719 44956;44957;44958;44959;44960 35516;35517;35518 35516 2 ATNVTYQAHHVSR Unmodified 1482.7328 0.7327737 310 O43252 PAPSS1 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.059 14.221 3 0.0044801 12845 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 46.318 32.639 73037000 0 0 0 2875800 2343100 4776700 3277300 1760500 2741700 5465900 9511300 8181700 5700600 6975100 19427000 5199 310 4720 44961;44962;44963;44964;44965;44966;44967;44968;44969;44970;44971;44972 35519;35520;35521 35520 2 ATNVVMNYSEIESK Unmodified 1583.7501 0.75012283 2428 Q14677 CLINT1 Clathrin interactor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 63.365 62.999 2 7.2951E-14 71257 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 136.7 127.69 310270000 0 66044000 0 14284000 11903000 16047000 25705000 18661000 13172000 20705000 22884000 30905000 15655000 16045000 38256000 5200 2428 4721 44973;44974;44975;44976;44977;44978;44979;44980;44981;44982;44983;44984;44985 35522;35523;35524;35525;35526;35527;35528;35529;35530;35531;35532;35533;35534 35526 13 ATNVVMNYSEIESK Oxidation (M) 1599.745 0.74503745 2428 Q14677 CLINT1 Clathrin interactor 1 yes yes 0 1 0 By MS/MS 2 0 1 1 55.214 49.4 2 1.5145E-09 63893 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.98 99.764 22363000 0 22363000 0 0 0 0 0 0 0 0 0 0 0 0 0 5201 2428 4721 44986 35535 35535 3987 1 ATNWGSLLQDK Acetyl (Protein N-term) 1273.6303 0.63026569 1547 P48637 GSS Glutathione synthetase yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6 4.03 1 2 1 4 2 2 1 1 1 1 89.939 88.587 2 8.2986E-10 91028 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 162.36 77.743 389510000 42537000 312820000 0 2126700 0 0 0 0 0 0 6936400 5804000 0 0 19283000 5202 1547 4722 44987;44988;44989;44990;44991;44992;44993;44994 35536;35537;35538;35539;35540;35541;35542;35543 35539 8 ATNYNAGDR Unmodified 980.43117 0.43117195 1855 P61626 LYZ Lysozyme C yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 7.2111 7.3063 2 0.0030654 5085 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 124.23 102.93 36214000 0 0 0 3677600 2963500 815030 10295000 8633800 2782600 1210200 2966100 1911800 0 958610 0 5203 1855 4723 44995;44996;44997;44998;44999;45000;45001;45002;45003;45004 35544;35545;35546;35547 35544 4 ATNYNAGDRSTDYGIFQINSR Unmodified 2362.0938 0.093800404 1855 P61626 LYZ Lysozyme C yes yes 0 0 1 By MS/MS 10 0 1 1 70.533 70.882 3 0.0028033 81585 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 32.706 24.315 4934100 0 0 0 0 0 0 0 0 0 0 0 4934100 0 0 0 5204 1855 4724 45005 35548 35548 1 ATPAQTPR Unmodified 840.44537 0.44536545 1332 P33991 MCM4 DNA replication licensing factor MCM4 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.5322 7.6594 2 0.013906 5676 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 71.342 45.892 71070000 0 0 0 2753300 2562800 5336600 5083600 5202000 4491500 5188900 14804000 6438200 3676400 4971200 10562000 5205 1332 4725 45006;45007;45008;45009;45010;45011;45012;45013;45014;45015;45016;45017 35549;35550;35551;35552 35550 4 ATPATAPGTSPR Unmodified 1125.5778 0.57783619 3943 Q96P47 AGAP3 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 16.756 16.976 2 0.0080882 16055 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 49.35 24.831 29129000 0 0 0 2215800 0 2687500 2056500 0 1929600 2385700 3183400 4488600 3562300 2776500 3843700 5206 3943 4726 45018;45019;45020;45021;45022;45023;45024;45025;45026;45027 35553;35554;35555 35554 3 ATPELGSSENSASSPPR Unmodified 1685.7857 0.78565671 4219 Q9BX63 BRIP1 Fanconi anemia group J protein yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 33.657 34.186 2 0.011087 36548 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 34.386 22.853 6342500 0 0 0 0 0 0 0 0 0 0 0 0 3067100 0 3275500 5207 4219 4727 45028;45029 35556 35556 1 ATPEQYQILK Unmodified 1189.6343 0.63428844 997 P14324 FDPS Farnesyl pyrophosphate synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 52.424 52.555 2 0.0015449 59394 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 107.66 75.73 626550000 0 0 0 13555000 10541000 18578000 16267000 17141000 9712600 27016000 98546000 76697000 0 56052000 282440000 5208 997 4728 45030;45031;45032;45033;45034;45035;45036;45037;45038;45039;45040 35557;35558;35559;35560;35561;35562;35563;35564;35565;35566;35567 35565 11 ATPGAPALTSMTPTAVER Unmodified 1769.8982 0.89818405 1734 P54198 HIRA Protein HIRA yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 72.848 73.034 2 0.0001364 84113 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 62.088 21.591 45975000 0 0 0 0 0 0 3707900 4312700 0 9402800 7761300 0 4137000 5989000 10664000 5209 1734 4729 45041;45042;45043;45044;45045;45046;45047 35568;35569;35570;35571;35572;35573 35568 6 ATPGNLGSSVLASK Acetyl (Protein N-term) 1342.7092 0.70924429 1537 P48426 PIP4K2A Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha yes yes 1 0 0 By MS/MS 1 0 1 1 103.81 104.71 2 0.0028336 96224 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 54.023 29.868 4860300 0 4860300 0 0 0 0 0 0 0 0 0 0 0 0 0 5210 1537 4730 45048 35574 35574 1 ATPHPSELK Unmodified 978.51345 0.51344502 2381 Q14160 SCRIB Protein scribble homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.108 14.27 2 0.033064 12978 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.082 24.59 32283000 0 0 0 1325200 1537800 1751100 1260200 1695700 1436500 4074600 3191500 3465300 3717200 2939200 5889000 5211 2381 4731 45049;45050;45051;45052;45053;45054;45055;45056;45057;45058;45059;45060 35575 35575 1 ATPLAVNSAASLWGPYK Acetyl (Protein N-term) 1786.9254 0.92538508 3643 Q92621 NUP205 Nuclear pore complex protein Nup205 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 94.582 94.673 2 0.00013575 110090 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 80.69 61.558 8579300 0 0 0 0 954070 0 0 1978800 777860 3355800 0 0 0 1512700 0 5212 3643 4732 45061;45062;45063;45064;45065;45066 35576;35577;35578;35579 35576 4 ATPLFIAAQEGHTK Unmodified 1482.7831 0.78307794 5222 Q9Y575 ASB3 Ankyrin repeat and SOCS box protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 2 1 1 66.982 60.718 2;3 1.4928E-30 81791 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 145.6 138.56 86943000 66267000 7145500 13531000 0 0 0 0 0 0 0 0 0 0 0 0 5213 5222 4733 45067;45068;45069;45070 35580;35581;35582;35583;35584;35585;35586;35587;35588;35589;35590 35585 11 ATPLSSTVTLSMSADVPLVVEYK Unmodified 2407.2556 0.25562892 959 P12004 PCNA Proliferating cell nuclear antigen yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.47 0.499 9 8 4 11 2 98.834 94.769 2;3 2.1852E-37 117187 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 144.05 137.47 1859300000 316630000 1440600000 102070000 0 0 0 0 0 0 0 0 0 0 0 0 5214 959 4734 45071;45072;45073;45074;45075;45076;45077;45078;45079;45080;45081;45082;45083;45084;45085;45086;45087 35591;35592;35593;35594;35595;35596;35597;35598;35599;35600;35601;35602;35603;35604;35605;35606;35607;35608;35609;35610;35611;35612 35596 22 ATPLSSTVTLSMSADVPLVVEYK Oxidation (M) 2423.2505 0.25054355 959 P12004 PCNA Proliferating cell nuclear antigen yes yes 0 1 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 92.428 88.898 2 7.9573E-205 110712 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 242.93 230.54 456730000 0 445130000 11596000 0 0 0 0 0 0 0 0 0 0 0 0 5215 959 4734 45088;45089;45090 35613;35614;35615 35613 1251 1 ATPMPSRPSTTPFIDK Unmodified 1744.8818 0.8818057 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 2 14 1 1 1 1 1 1 2 1 1 1 1 1 1 2 59.383 58.763 2;3 0.0043908 67510 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 40.237 34.074 500520000 75408000 0 3780200 20272000 22589000 25020000 19700000 28952000 20296000 31097000 44066000 42495000 32877000 35445000 98529000 5216 1226 4735 45091;45092;45093;45094;45095;45096;45097;45098;45099;45100;45101;45102;45103;45104;45105;45106 35616;35617;35618;35619;35620;35621;35622;35623 35622 2 ATPQVPVLR Unmodified 979.58147 0.581465 4126 Q9BSJ2 TUBGCP2 Gamma-tubulin complex component 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.26 56.386 2 0.040202 64199 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 44.447 11.606 124110000 0 0 0 6862400 8854900 10417000 9782500 9252400 6902000 10798000 10402000 15981000 10559000 8087400 16214000 5217 4126 4736 45107;45108;45109;45110;45111;45112;45113;45114;45115;45116;45117;45118 35624;35625;35626 35624 3 ATPRLASTNSSVLGADLPSSMK Oxidation (M) 2218.1263 0.12634609 2289 Q13428 TCOF1 Treacle protein yes yes 0 1 1 By MS/MS 2 0 1 1 73.539 65.343 3 0.001111 86559 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.66 41.962 17447000 17447000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5218 2289 4737 45119 35627 35627 3725 1 ATPRLASTNSSVLGADLPSSMK Unmodified 2202.1314 0.13143146 2289 Q13428 TCOF1 Treacle protein yes yes 0 0 1 By MS/MS 2 0 1 1 79.822 71.692 3 1.4378E-06 94173 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.306 46.22 13812000 13812000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5219 2289 4737 45120 35628;35629;35630 35629 3 ATPSENLVPSSAR Unmodified 1327.6732 0.67319314 3357 Q8N684 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 43.027 43.014 2 0.01416 48293 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 70.977 61.545 593870000 0 0 0 57798000 63180000 68634000 98431000 55754000 64626000 79512000 0 0 105930000 0 0 5220 3357 4738 45121;45122;45123;45124;45125;45126;45127;45128 35631;35632;35633 35632 1 ATPSVSVSK Unmodified 874.476 0.47599688 1638 P50851 LRBA Lipopolysaccharide-responsive and beige-like anchor protein yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 21.01 21.246 2 0.012192 22169 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 61.679 20.027 101990000 0 0 0 0 5269300 11581000 9366500 0 8260700 11638000 10670000 15643000 0 13545000 16022000 5221 1638 4739 45129;45130;45131;45132;45133;45134;45135;45136;45137;45138 35634;35635;35636;35637;35638;35639 35634 6 ATPVNLAGLATVR Unmodified 1281.7405 0.74048484 2826 Q5VWQ8 DAB2IP Disabled homolog 2-interacting protein yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 77.757 77.845 2 0.015856 89144 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 39.917 31.692 38127000 0 0 0 0 3756400 0 4848700 0 0 5575200 4404400 0 4998900 4445500 10098000 5222 2826 4740 45139;45140;45141;45142;45143;45144;45145 35640;35641;35642;35643 35643 4 ATPVQLPSPPCTSSPVVPSHPPVQQVK Unmodified 2833.4796 0.47964906 2433 Q14686 NCOA6 Nuclear receptor coactivator 6 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 77.001 77.087 3 2.0374E-07 89378 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 39.626 37.153 29469000 0 0 0 0 2604800 3186400 2747100 3642600 2189500 3468600 3161700 5364400 3103600 0 0 5223 2433 4741 45146;45147;45148;45149;45150;45151;45152;45153;45154 35644;35645;35646;35647;35648 35648 5 ATQADLMELDMAMEPDRK Acetyl (Protein N-term) 2105.9432 0.94316169 1341 P35222 CTNNB1 Catenin beta-1 yes yes 1 0 1 By MS/MS 2 0 1 1 93.014 88.103 2 8.9644E-08 109432 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.28 74.954 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5224 1341 4742 45155 35649 35649 1 ATQALVLAPTR Unmodified 1139.6663 0.66625727 1816 P60842 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 53.552 53.693 2 1.1712E-11 60558 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 157.24 143.04 1933800000 0 0 0 73089000 76268000 236320000 101390000 112240000 57868000 235390000 192520000 138130000 136210000 174920000 399470000 5225 1816 4743 45156;45157;45158;45159;45160;45161;45162;45163;45164;45165;45166;45167 35650;35651;35652;35653;35654;35655;35656;35657;35658;35659;35660;35661;35662;35663;35664;35665;35666;35667;35668;35669 35650 20 ATQALVLAPTRELAQQIQK Unmodified 2078.1848 0.18478766 1816 P60842 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.56 3.62 4 1 11 2 2 1 1 1 1 1 1 1 1 1 1 1 1 79.859 78.693 3 8.4348E-12 90374 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.453 75.153 846170000 520130000 181200000 13164000 0 3988200 9865700 5482000 7506600 7822000 20071000 12069000 8590200 5274700 7878900 43126000 5226 1816 4744 45168;45169;45170;45171;45172;45173;45174;45175;45176;45177;45178;45179;45180;45181;45182;45183 35670;35671;35672;35673;35674;35675;35676;35677;35678;35679;35680;35681;35682;35683 35672 14 ATQDQILQTLIQR Unmodified 1526.8417 0.84165545 3037 Q76L83 ASXL2 Putative Polycomb group protein ASXL2 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 84.424 84.452 2 0.0068766 97996 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 46.592 29.96 12254000 0 0 0 0 2178600 0 0 0 0 0 0 5059200 0 0 5015800 5227 3037 4745 45184;45185;45186 35684 35684 1 ATQEENRELR Unmodified 1244.6109 0.61092723 5273 Q9Y6A5 TACC3 Transforming acidic coiled-coil-containing protein 3 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 7.4817 7.7295 3 0.0063155 5696 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 47.894 7.1664 42879000 0 0 0 0 0 0 0 5460200 0 0 15779000 0 4359800 9403400 7876200 5228 5273 4746 45187;45188;45189;45190;45191 35685 35685 1 ATQEWLEK Unmodified 1003.4975 0.4974606 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 16.796 17.052 2 0.03661 17329 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 51.787 5.453 78772000 0 0 0 0 0 0 0 0 0 0 0 0 78772000 0 0 5229 2459 4747 45192 35686 35686 1 ATQGEQDNYEMHVR Unmodified 1676.7213 0.72128232 2543 Q15528 MED22 Mediator of RNA polymerase II transcription subunit 22 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 28.644 28.901 3 0.020763 30226 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 31.389 20.535 81296000 0 0 0 0 3494500 4302600 4941000 0 0 9445400 8331300 18933000 7482700 6356500 18010000 5230 2543 4748 45193;45194;45195;45196;45197;45198;45199;45200;45201 35687 35687 1 ATQLLEGLVQELQK Unmodified 1568.8774 0.87737225 1669 P51692 STAT5B Signal transducer and activator of transcription 5B yes yes 0 0 0 By MS/MS 2 0 1 1 97.751 92.978 2 0.0013123 115110 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.03 83.04 34678000 0 34678000 0 0 0 0 0 0 0 0 0 0 0 0 0 5231 1669 4749 45202 35688 35688 1 ATQLQGDEEPSAPPTSTQAQQK Unmodified 2311.0928 0.092797351 384 O60231 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.13 38.311 3 3.5216E-20 42359 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 87.208 81.576 170900000 0 0 0 11326000 10029000 12525000 15065000 11700000 8930300 15415000 17125000 18807000 12462000 9866500 27654000 5232 384 4750 45203;45204;45205;45206;45207;45208;45209;45210;45211;45212;45213;45214 35689;35690;35691;35692;35693;35694;35695;35696;35697;35698;35699;35700 35694 12 ATQMPEGGQGAPPMYQLYK Oxidation (M) 2081.955 0.955047 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 1 0 By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 8 3.46 2 6 2 1 1 1 1 1 1 68.26 66.898 2 6.7952E-13 85559 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.38 92.652 163920000 0 131900000 0 0 2356100 4231600 2691500 0 0 0 4991900 0 6295900 0 11456000 5233 1986 4751 45215;45216;45217;45218;45219;45220;45221;45222 35701;35702;35703;35704 35702 3209;3210 4 ATQMPEGGQGAPPMYQLYK Unmodified 2065.9601 0.96013238 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching 7.5 3.55 1 1 4 2 1 1 1 1 75.29 73.947 2;3 1.0535E-51 91464 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 185.2 166.63 725570000 0 674000000 0 0 4445200 0 0 0 0 0 0 0 6513900 13211000 27401000 5234 1986 4751 45223;45224;45225;45226;45227;45228 35705;35706;35707 35705 3 ATQPETTEEVTDLK Unmodified 1560.7519 0.75189697 6 A0MZ66 KIAA1598 Shootin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.15 3.39 1 1 1 10 2 1 1 1 1 1 1 1 1 1 1 1 50.081 49.823 2 1.5618E-20 49939 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 143.79 126.35 225850000 30937000 14962000 0 0 7163600 8790300 14289000 9747300 0 23556000 21659000 23118000 16076000 13810000 41745000 5235 6 4752 45229;45230;45231;45232;45233;45234;45235;45236;45237;45238;45239;45240;45241 35708;35709;35710;35711;35712;35713;35714;35715;35716;35717;35718 35717 11 ATQQQHDFTLTQTADGR Unmodified 1916.8977 0.89766678 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 30 2 3 3 3 2 3 3 2 2 2 3 2 40.224 40.374 2;3 8.9627E-97 44472 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 149.97 145.5 1561300000 0 0 0 82971000 83441000 132910000 94795000 106840000 99890000 141000000 126290000 164280000 151470000 125720000 251680000 5236 1986 4753 45242;45243;45244;45245;45246;45247;45248;45249;45250;45251;45252;45253;45254;45255;45256;45257;45258;45259;45260;45261;45262;45263;45264;45265;45266;45267;45268;45269;45270;45271 35719;35720;35721;35722;35723;35724;35725;35726;35727;35728;35729;35730;35731;35732;35733;35734;35735;35736;35737;35738;35739;35740 35734 20 ATQSYLQEK Unmodified 1066.5295 0.52948901 1592 P49750 YLPM1 YLP motif-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 23.819 22.626 2 0.017295 22941 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 87.696 50.537 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5237 1592 4754 45272;45273;45274 35741;35742;35743 35742 3 ATQTPSCWAEEGAEK Unmodified 1663.7148 0.71479996 3171 Q86VQ1 GLCCI1 Glucocorticoid-induced transcript 1 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 43.088 42.277 2 0.00058417 46494 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.189 78.88 34238000 0 10735000 0 3880800 0 4696000 0 5117500 2770100 0 0 7039100 0 0 0 5238 3171 4755 45275;45276;45277;45278;45279;45280;45281;45282 35744;35745;35746;35747;35748;35749;35750 35746 7 ATQVEPLLPGGATLLQAEEHGGLVRK Acetyl (Protein N-term) 2725.4763 0.47627824 2961 Q6PKG0 LARP1 La-related protein 1 yes yes 1 0 1 By MS/MS 2 0 1 1 95.598 87.467 3 2.6721E-05 113109 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.52 40.722 5788900 5788900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5239 2961 4756 45283 35751 35751 1 ATRAPVASPAALGSTATASPAAPAR Unmodified 2262.208 0.2080423 3001 Q6ZN55 ZNF574 Zinc finger protein 574 yes yes 0 0 1 By MS/MS By matching By MS/MS 10 0 3 1 1 1 55.996 56.125 3 0.0031192 63299 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.3 32.678 4243400 0 0 0 0 0 0 2493100 1750200 0 0 0 0 0 0 0 5240 3001 4757 45284;45285;45286 35752;35753 35753 2 ATRPASTSQPDPSPDR Unmodified 1681.802 0.80197548 1112 P20749 BCL3 B-cell lymphoma 3 protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.961 15.131 3 2.7383E-06 13794 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 66.335 55.701 88331000 0 0 0 4585900 2921700 4898000 10326000 4772100 3770000 7053500 9111000 9505500 12172000 7326800 11889000 5241 1112 4758 45287;45288;45289;45290;45291;45292;45293;45294;45295;45296;45297;45298 35754;35755;35756;35757;35758;35759;35760;35761;35762;35763;35764;35765 35761 12 ATRVEEAAR Acetyl (Protein N-term) 1043.536 0.53597137 4652 Q9NUQ3 TXLNG Gamma-taxilin yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 28.174 28.323 2 0.0053476 30446 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 82.749 35.552 133960000 0 0 0 7238900 8254200 9120800 10705000 8801800 6763700 13537000 23502000 21310000 14769000 9961800 0 5242 4652 4759 45299;45300;45301;45302;45303;45304;45305;45306;45307;45308;45309 35766;35767;35768;35769;35770;35771;35772;35773;35774;35775 35769 10 ATSAGSSPSCSLAGR Unmodified 1407.6412 0.64124108 4223 Q9BXB5 OSBPL10 Oxysterol-binding protein-related protein 10 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 23.103 23.296 2 0.0006156 23837 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 84.605 73.454 47122000 0 0 0 2528700 2723300 2460300 2808000 3217200 2262700 4033900 6072500 8771500 0 4353100 7890900 5243 4223 4760 45310;45311;45312;45313;45314;45315;45316;45317;45318;45319;45320 35776;35777;35778;35779;35780;35781;35782;35783 35782 8 ATSATSPHAPGFPAEGR Acetyl (Protein N-term) 1694.8012 0.8012472 4650 Q9NUP7 TRMT13 tRNA:m(4)X modification enzyme TRM13 homolog yes yes 1 0 0 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 55.359 55.599 2 0.00016337 62487 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.802 51.8 9475700 0 0 0 1043700 0 0 0 0 0 0 2654900 2126300 0 0 3650800 5244 4650 4761 45321;45322;45323;45324 35784 35784 1 ATSDTLESPPK Unmodified 1144.5612 0.56118307 584 O94782 USP1 Ubiquitin carboxyl-terminal hydrolase 1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 24.735 24.946 2 0.0040318 26791 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 62.463 13.045 66489000 0 0 0 7158200 5676500 6633100 5496100 0 6103300 0 6602400 6775900 7922600 5102300 9019000 5245 584 4762 45325;45326;45327;45328;45329;45330;45331;45332;45333;45334 35785;35786;35787;35788 35785 4 ATSEEDVSIK Unmodified 1077.519 0.51898391 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.062 24.267 2 0.0011859 24873 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 108.98 86.237 263700000 0 0 0 15129000 16956000 18012000 16189000 14331000 14470000 23511000 24180000 38008000 30707000 20055000 32155000 5246 2804 4763 45335;45336;45337;45338;45339;45340;45341;45342;45343;45344;45345;45346 35789;35790;35791;35792;35793;35794;35795;35796;35797;35798;35799;35800;35801;35802;35803 35800 14 ATSEVPGSQASPNPVPGDGLHR Unmodified 2172.056 0.055958335 3857 Q96GM8 TOE1 Target of EGR1 protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 49.027 49.208 3 4.3142E-05 54640 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 47.392 32.778 189420000 0 0 0 0 10561000 13746000 11555000 14691000 0 22010000 21839000 0 32803000 22306000 39908000 5247 3857 4764 45347;45348;45349;45350;45351;45352;45353;45354;45355 35804;35805;35806;35807;35808;35809;35810;35811;35812;35813 35810 10 ATSFLLALEPELEAR Unmodified 1658.8879 0.88793694 788 P04843 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 94.175 94.31 2 0.012939 109584 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 36.303 24.771 8050000 0 0 0 0 0 0 0 0 0 1704200 1681800 1458700 0 1487100 1718300 5248 788 4765 45356;45357;45358;45359;45360 35814;35815;35816 35814 3 ATSGANGPGSATASASNPRK Acetyl (Protein N-term) 1842.882 0.88201671 2697 Q53ET0 CRTC2 CREB-regulated transcription coactivator 2 yes yes 1 0 1 By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 23.072 23.326 2 2.3413E-09 23934 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 76.588 67.634 36644000 0 0 0 1967900 0 2680600 2329400 2516800 1889500 2636400 5155700 5166400 3546600 4212000 4542300 5249 2697 4766 45361;45362;45363;45364;45365;45366;45367;45368;45369;45370;45371 35817;35818;35819;35820;35821;35822 35819 5 ATSIDPNTYITWIDK Unmodified 1736.8621 0.86211612 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.17 3.85 2 1 3 2 1 1 1 1 88.986 87.299 2 7.393E-05 101343 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.698 57.331 500850000 0 484510000 2796900 0 0 0 0 0 0 0 2973600 0 0 3039700 7532600 5250 2392 4767 45372;45373;45374;45375;45376;45377 35823;35824;35825;35826;35827;35828;35829 35824 7 ATSISTQLPDDPAK Unmodified 1442.7253 0.72528829 4942 Q9UJW0 DCTN4 Dynactin subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.261 52.407 2 1.9537E-17 58025 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 124.42 103.55 120920000 0 0 0 6173600 5828800 10192000 8055300 5667000 5302500 13798000 15380000 12637000 9215100 7039000 21632000 5251 4942 4768 45378;45379;45380;45381;45382;45383;45384;45385;45386;45387;45388;45389 35830;35831;35832;35833;35834;35835;35836;35837;35838;35839;35840;35841;35842 35833 13 ATSIVAWLAK Unmodified 1058.6124 0.61243078 36 A8K2U0 A2ML1 Alpha-2-macroglobulin-like protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 83.946 83.552 2 0.008766 97133 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 59.245 35.09 2046400 0 0 0 2046400 0 0 0 0 0 0 0 0 0 0 0 5252 36 4769 45390 35843 35843 1 ATSLGSNTYNR Acetyl (Protein N-term) 1224.5735 0.57347909 4690 Q9NW64 RBM22 Pre-mRNA-splicing factor RBM22 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.292 42.469 2 0.00010628 47307 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 89.029 72.489 165420000 0 0 0 11367000 12719000 7416000 11165000 9378200 5342900 14251000 15646000 21872000 9805200 9266200 37189000 5253 4690 4770 45391;45392;45393;45394;45395;45396;45397;45398;45399;45400;45401;45402 35844;35845;35846;35847;35848;35849;35850;35851;35852;35853;35854 35846 11 ATSLTLEGGRLK Unmodified 1244.7089 0.70885036 3442 Q8NFA0 USP32 Ubiquitin carboxyl-terminal hydrolase 32 yes yes 0 0 1 By MS/MS 2 0 1 1 54.015 45.952 3 0.0093045 63147 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.915 23.441 9233100 9233100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5254 3442 4771 45403 35855 35855 1 ATSLVDAVNSDAAK Unmodified 1360.6834 0.68342347 731 P00519 ABL1 Tyrosine-protein kinase ABL1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 50.113 50.306 2 0.00058523 55815 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 66.267 49.596 14809000 0 0 0 0 0 0 0 6551300 0 0 0 0 0 8257600 0 5255 731 4772 45404;45405;45406 35856;35857;35858 35858 3 ATSLVDAVNSDAAKPSQPGEGLK Unmodified 2254.1441 0.14410464 731 P00519 ABL1 Tyrosine-protein kinase ABL1 yes yes 0 0 1 By MS/MS By matching By matching By matching 10 0 4 1 1 1 1 61.451 61.655 3 0.00099099 70184 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 32.706 28.978 16050000 0 0 0 0 0 0 3306100 0 0 3017500 6481300 0 3245300 0 0 5256 731 4773 45407;45408;45409;45410 35859 35859 1 ATSNNPRK Acetyl (Protein N-term) 928.47264 0.47264284 2976 Q6UUV9 CRTC1 CREB-regulated transcription coactivator 1 yes yes 1 0 1 By MS/MS 2.5 0.5 1 1 2 5.6287 2.3279 2 0.046207 4326 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 53.754 28.197 46306000 0 46306000 0 0 0 0 0 0 0 0 0 0 0 0 0 5257 2976 4774 45411;45412 35860 35860 1 ATSNVFAMFDQSQIQEFK Oxidation (M) 2105.9728 0.97280556 229 P19105;O14950;P24844 MYL12A;MYL12B;MYL9 Myosin regulatory light chain 12A;Myosin regulatory light chain 12B;Myosin regulatory light polypeptide 9 yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 1 2 2 2 85.027 85.09 2;3 0 98805 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 295.83 287.45 1026700000 0 0 0 19011000 72160000 83146000 48928000 74195000 78266000 169170000 122820000 104790000 31789000 52527000 169870000 5258 229 4775 45413;45414;45415;45416;45417;45418;45419;45420;45421;45422;45423;45424;45425;45426;45427;45428;45429;45430;45431;45432;45433;45434;45435 35861;35862;35863;35864;35865;35866;35867;35868;35869;35870;35871;35872;35873;35874;35875;35876;35877;35878;35879 35877 301 17 ATSNVFAMFDQSQIQEFK Unmodified 2089.9779 0.97789093 229 P19105;O14950;P24844 MYL12A;MYL12B;MYL9 Myosin regulatory light chain 12A;Myosin regulatory light chain 12B;Myosin regulatory light polypeptide 9 yes no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 91.561 91.658 2 0.0028662 106502 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 55.314 47.944 17122000 0 0 0 0 650160 0 0 874420 0 3762700 2781900 1847100 0 0 7205300 5259 229 4775 45436;45437;45438;45439;45440;45441 35880;35881;35882 35881 3 ATSPLVSLYPALECR Unmodified 1675.8603 0.86034198 3849 Q96G74 OTUD5 OTU domain-containing protein 5 yes yes 0 0 0 By MS/MS 10 0 1 1 86.54 86.698 2 0.001343 100218 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.225 30.182 5066600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5066600 5260 3849 4776 45442 35883 35883 1 ATSQHECSSSQLK Unmodified 1461.6518 0.65180577 2310 Q13535 ATR Serine/threonine-protein kinase ATR yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 7.8472 4.4659 3 0.0079653 6592 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 48.112 37.165 37975000 3250000 34725000 0 0 0 0 0 0 0 0 0 0 0 0 0 5261 2310 4777 45443;45444 35884 35884 1 ATSRGCITIIGGGDTATCCAK Unmodified 2168.9977 0.99765687 733 P00558 PGK1 Phosphoglycerate kinase 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 56.785 50.015 2;3 3.8688E-24 67833 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.395 77.121 141920000 131560000 0 10358000 0 0 0 0 0 0 0 0 0 0 0 0 5262 733 4778 45445;45446;45447 35885;35886;35887;35888;35889 35885 5 ATSRYEPVAEIGVGAYGTVYK Acetyl (Protein N-term) 2272.1376 0.1375627 956 P11802 CDK4 Cyclin-dependent kinase 4 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 1 3 2 85.712 81.4 2;3 2.5601E-10 102684 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.579 69.712 226270000 37842000 170670000 17757000 0 0 0 0 0 0 0 0 0 0 0 0 5263 956 4779 45448;45449;45450;45451;45452;45453 35890;35891;35892;35893;35894;35895 35893 6 ATSSEEVLLIVK Acetyl (Protein N-term) 1329.7391 0.73914744 1324 P32780 GTF2H1 General transcription factor IIH subunit 1 yes yes 1 0 0 By MS/MS 1 0 1 1 105.76 111.03 2 7.5882E-05 91599 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 94.309 82.819 9652100 9652100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5264 1324 4780 45454 35896 35896 1 ATSSGRLPLPSPALEYTLGSR Unmodified 2172.1539 0.15388147 3213 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.789 82.851 3 1.0368E-61 95509 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 121.46 116.94 209410000 0 0 0 1583900 4297300 13688000 4139300 13209000 11091000 20429000 11741000 16860000 14083000 17764000 80526000 5265 3213 4781 45455;45456;45457;45458;45459;45460;45461;45462;45463;45464;45465;45466 35897;35898;35899;35900;35901;35902;35903;35904;35905;35906;35907;35908;35909 35900 13 ATSSHPNSTSLK Unmodified 1228.6048 0.60477922 2401 Q14258 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 6.35 3.88 6 2 9 2 4 2 1 1 1 1 1 1 1 1 1 7.9887 6.5698 2;3 3.2036E-24 10170 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 172.61 128.84 2173100000 1099200000 955620000 42987000 9111000 4756600 6694400 0 6915600 11032000 12527000 991190 0 0 714200 22554000 5266 2401 4782 45467;45468;45469;45470;45471;45472;45473;45474;45475;45476;45477;45478;45479;45480;45481;45482;45483 35910;35911;35912;35913;35914;35915;35916;35917;35918;35919;35920;35921;35922;35923 35919 10 ATSSTQSLAR Unmodified 1020.52 0.51998696 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 10.822 10.945 2 0.035045 8404 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 70.256 49.631 34549000 0 0 0 2600000 2232800 3242500 3067400 2606900 2228800 3432200 4554400 0 3388200 2935800 4260400 5267 2459 4783 45484;45485;45486;45487;45488;45489;45490;45491;45492;45493;45494 35924;35925 35924 1 ATSTATSGFAGAIGQK Unmodified 1466.7365 0.73652168 1667 P51659 HSD17B4 Peroxisomal multifunctional enzyme type 2;(3R)-hydroxyacyl-CoA dehydrogenase;Enoyl-CoA hydratase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 48.56 48.66 2 0.0017739 55400 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 71.153 57.067 75291000 0 0 0 9671400 7437600 7553200 0 6913000 7405600 10299000 9045700 10075000 6889800 0 0 5268 1667 4784 45495;45496;45497;45498;45499;45500;45501;45502;45503 35926;35927;35928;35929;35930;35931;35932 35932 7 ATSTSDMLLK Oxidation (M) 1081.5325 0.53252548 4690 Q9NW64 RBM22 Pre-mRNA-splicing factor RBM22 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 29.602 28.85 2 0.006285 31426 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 57.59 46.762 94826000 0 19183000 0 0 10019000 10445000 8672500 0 7555000 0 10491000 0 6703700 5243100 16513000 5269 4690 4785 45504;45505;45506;45507;45508;45509;45510;45511;45512;45513 35933;35934;35935;35936;35937;35938;35939 35934 6089 7 ATSTTELPPEYLTSPLSQQSQLPPK Unmodified 2712.3858 0.38579147 230 O14964 HGS Hepatocyte growth factor-regulated tyrosine kinase substrate yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 84.409 83.572 3 0.00025591 96922 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 32.952 17.057 123190000 0 47719000 0 0 0 0 0 0 11460000 25724000 19683000 18607000 0 0 0 5270 230 4786 45514;45515;45516;45517;45518 35940;35941;35942;35943;35944;35945 35944 6 ATSVALPGWSPSETR Unmodified 1557.7787 0.77872084 2604 Q16513 PKN2 Serine/threonine-protein kinase N2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 74.083 73.963 2 6.2419E-19 85115 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 125.72 104.35 172080000 0 0 0 26488000 29573000 56584000 32957000 26477000 0 0 0 0 0 0 0 5271 2604 4787 45519;45520;45521;45522;45523 35946;35947;35948;35949;35950 35946 5 ATSVSVQDDRIR Unmodified 1345.695 0.69499121 1106 P20585 MSH3 DNA mismatch repair protein Msh3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.542 29.734 3 0.0038075 31017 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.577 26.678 65992000 0 0 0 5014700 3647600 5563000 4591200 5086300 4783600 5557700 4277800 6706600 6401600 6207600 8154000 5272 1106 4788 45524;45525;45526;45527;45528;45529;45530;45531;45532;45533;45534;45535 35951;35952;35953 35953 3 ATTADGSSILDR Unmodified 1205.5888 0.58879481 4137 Q9BT78 COPS4 COP9 signalosome complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.372 38.552 2 1.0037E-05 41750 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 130.98 119.13 369800000 0 0 0 21406000 19977000 28231000 22761000 15257000 14244000 32412000 46750000 41241000 27704000 31077000 68740000 5273 4137 4789 45536;45537;45538;45539;45540;45541;45542;45543;45544;45545;45546;45547 35954;35955;35956;35957;35958;35959;35960;35961;35962;35963;35964;35965;35966;35967;35968 35959 15 ATTADGSSILDRAVIEHNLLSASK Unmodified 2468.2871 0.28708048 4137 Q9BT78 COPS4 COP9 signalosome complex subunit 4 yes yes 0 0 1 By MS/MS By MS/MS 2.4 0.49 3 2 2 3 86.679 81.742 3;4 8.9168E-19 103035 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.83 74.78 64533000 9465900 55067000 0 0 0 0 0 0 0 0 0 0 0 0 0 5274 4137 4790 45548;45549;45550;45551;45552 35969;35970;35971;35972;35973 35969 4 ATTAHDLSGK Unmodified 999.49852 0.49852324 1766 P55265 ADAR Double-stranded RNA-specific adenosine deaminase yes yes 0 0 0 By MS/MS 2 0 1 1 8.0434 4.7958 2 0.037936 7313 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.163 45.283 7823100 0 7823100 0 0 0 0 0 0 0 0 0 0 0 0 0 5275 1766 4791 45553 35974 35974 0 ATTATMATSGSAR Acetyl (Protein N-term);Oxidation (M) 1282.5823 0.58232922 1400 P38919 EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.253 23.458 2 2.4392E-20 24472 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 152.07 119.23 433840000 0 0 0 25205000 26186000 38887000 41039000 31886000 25049000 43677000 37311000 70583000 35701000 30613000 27701000 5276 1400 4792 45554;45555;45556;45557;45558;45559;45560;45561;45562;45563;45564;45565 35975;35976;35977;35978;35979;35980;35981;35982;35983;35984;35985;35986 35979 2177 12 ATTATMATSGSAR Acetyl (Protein N-term) 1266.5874 0.5874146 1400 P38919 EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 35.348 35.588 2 1.0074E-13 39153 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 137.89 129.42 417070000 0 0 0 20720000 0 44351000 26617000 35118000 25039000 38546000 43825000 58886000 26692000 35016000 62254000 5277 1400 4792 45566;45567;45568;45569;45570;45571;45572;45573;45574;45575;45576 35987;35988;35989;35990;35991;35992;35993;35994;35995;35996;35997 35993 11 ATTATMATSGSARK Acetyl (Protein N-term);Oxidation (M) 1410.6773 0.67729224 1400 P38919 EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes yes 1 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.53 3.84 2 3 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 28.028 27.888 2 1.9485E-53 92804 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 192.14 170.77 738110000 128130000 230130000 2663700 23536000 16145000 30666000 34277000 25342000 29770000 27951000 35741000 66304000 26521000 22602000 38338000 5278 1400 4793 45577;45578;45579;45580;45581;45582;45583;45584;45585;45586;45587;45588;45589;45590;45591;45592;45593 35998;35999;36000;36001;36002;36003;36004;36005;36006;36007;36008;36009;36010;36011;36012;36013;36014 36004 2177 17 ATTATMATSGSARK Acetyl (Protein N-term) 1394.6824 0.68237762 1400 P38919 EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 27.587 26.784 2 2.6498E-100 28873 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 201.6 175.09 1395400000 101060000 650060000 0 26086000 26367000 57893000 48570000 64291000 38545000 61826000 84864000 74151000 41468000 45494000 74779000 5279 1400 4793 45594;45595;45596;45597;45598;45599;45600;45601;45602;45603;45604;45605;45606;45607;45608;45609 36015;36016;36017;36018;36019;36020;36021;36022;36023;36024;36025;36026;36027;36028;36029;36030;36031;36032;36033 36025 19 ATTESFEDGLK Unmodified 1196.5561 0.55609769 488 O75376 NCOR1 Nuclear receptor corepressor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 43.916 44.134 2 0.00031818 49567 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 103.7 91.931 169550000 0 0 0 0 19656000 9476400 16503000 15211000 10422000 12996000 0 14965000 21034000 18966000 30323000 5280 488 4794 45610;45611;45612;45613;45614;45615;45616;45617;45618;45619;45620 36034;36035;36036;36037;36038;36039;36040;36041;36042;36043;36044;36045 36041 12 ATTGTPTADRGDAAATDDPAARFQVQK Acetyl (Protein N-term) 2773.3267 0.32671347 3136 Q86TI2 DPP9 Dipeptidyl peptidase 9 yes yes 1 0 2 By MS/MS 2 0 1 1 66.343 58.048 3 2.4104E-06 77958 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 41.087 33.976 8755100 8755100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5281 3136 4795 45621 36046 36046 1 ATTGYPDPYGGEK Unmodified 1354.6041 0.60411052 1802 P58107 EPPK1 Epiplakin yes yes 0 0 0 By MS/MS 10 0 1 1 38.463 38.624 2 0.021896 42876 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 51.436 33.572 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5282 1802 4796 45622 36047 36047 1 ATTHEIMGPK Unmodified 1083.5383 0.53827956 2300 Q13492 PICALM Phosphatidylinositol-binding clathrin assembly protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 21.69 17.859 2 1.0394E-10 23802 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 172.94 120.54 82300000 17688000 52096000 12516000 0 0 0 0 0 0 0 0 0 0 0 0 5283 2300 4797 45623;45624;45625 36048;36049;36050;36051 36048 4 ATTHEIMGPK Oxidation (M) 1099.5332 0.53319418 2300 Q13492 PICALM Phosphatidylinositol-binding clathrin assembly protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 11.25 10.707 2 0.0046098 8630 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.534 52.123 47751000 7085900 0 11308000 0 0 0 3211400 2427300 0 4966100 0 4934400 3221300 4812100 5784400 5284 2300 4797 45626;45627;45628;45629;45630;45631;45632;45633;45634 36052;36053;36054;36055;36056;36057 36052 3763 6 ATTITSVLPK Unmodified 1029.607 0.60701105 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 69.039 63.08 2 0.013842 80912 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.256 45.437 692000000 18575000 667580000 5849700 0 0 0 0 0 0 0 0 0 0 0 0 5285 1300 4798 45635;45636;45637 36058 36058 1 ATTLSNAVSSLASTGLSLTK Unmodified 1921.0368 0.036786022 2300 Q13492 PICALM Phosphatidylinositol-binding clathrin assembly protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 91.979 92.132 2 0.00017386 106968 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 68.83 56.47 8812900 0 0 0 0 0 0 0 0 0 2616600 908320 0 0 0 5288000 5286 2300 4799 45638;45639;45640 36059 36059 1 ATTPADGEEPAPEAEALAAAR Unmodified 2036.9651 0.96507764 3982 Q96S44 TP53RK TP53-regulating kinase yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching 10 0 5 1 1 1 1 1 66.956 66.826 2 0.0091782 76777 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 39.005 26.237 25520000 0 0 0 2780600 3486200 6675700 5266200 0 0 0 0 7311800 0 0 0 5287 3982 4800 45641;45642;45643;45644;45645 36060 36060 1 ATTPASTANSDVATIPTDTPLK Unmodified 2171.0958 0.095757464 391 O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.437 70.507 2 5.3865E-13 80996 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 93.823 82.383 81252000 0 0 0 3108300 2126800 6389400 4643400 3283100 3648800 7591000 11371000 11214000 5966600 7804200 14105000 5288 391 4801 45646;45647;45648;45649;45650;45651;45652;45653;45654;45655;45656;45657 36061;36062;36063;36064;36065 36064 5 ATTPSLPSVDNEFK Unmodified 1504.7409 0.74093835 2970 Q6T4R5 NHS Nance-Horan syndrome protein yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 72.392 72.302 2 0.016646 83090 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 36.847 22.386 27999000 0 0 0 5300300 4724600 5226600 5863400 0 0 0 0 0 0 0 6884300 5289 2970 4802 45658;45659;45660;45661;45662 36066 36066 1 ATTQILEELK Unmodified 1144.634 0.63395408 1575 P49454 CENPF Centromere protein F yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 74.798 70.852 2 0.016631 88339 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.556 39.594 28577000 0 26966000 1611100 0 0 0 0 0 0 0 0 0 0 0 0 5290 1575 4803 45663;45664 36067 36067 1 ATTSGSNSISVR Unmodified 1178.5891 0.58912916 3197 Q86XL3 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 20.205 20.387 2 0.013987 19797 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.259 27.657 44126000 0 0 0 6893300 4088300 0 3748200 2161800 2598000 5722100 6007800 0 5125800 3205400 4575300 5291 3197 4804 45665;45666;45667;45668;45669;45670;45671;45672;45673;45674 36068;36069 36068 2 ATTVPDFQETRPR Unmodified 1516.7634 0.76340513 4592 Q9NR46 SH3GLB2 Endophilin-B2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 1 2 2 2 2 2 2 2 2 2 2 2 44.973 45.176 2;3 3.3497E-05 50005 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 111.06 87.206 1023500000 0 0 0 51205000 57982000 64652000 65629000 94596000 52031000 93557000 102790000 104590000 126500000 88546000 121380000 5292 4592 4805 45675;45676;45677;45678;45679;45680;45681;45682;45683;45684;45685;45686;45687;45688;45689;45690;45691;45692;45693;45694;45695;45696;45697 36070;36071;36072;36073;36074;36075;36076;36077;36078;36079;36080;36081;36082 36080 10 ATVAAFAASEGHSHPR Unmodified 1607.7805 0.78045218 4651 Q9NUP9 LIN7C Protein lin-7 homolog C no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 32.909 32.983 3 0.0033473 36031 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 42.095 34.42 32687000 0 0 0 0 3287500 0 6227500 0 3385200 9702400 10084000 0 0 0 0 5293 4651 4806 45698;45699;45700;45701;45702 36083;36084;36085;36086 36085 4 ATVDMLQAEGGR Unmodified 1246.5976 0.59758535 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 47.875 48.061 2 0.0011831 54347 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 69.979 52.16 35549000 0 0 0 0 3617000 4037600 3417200 0 3141400 0 7225200 4836800 4999500 4273900 0 5294 5049 4807 45703;45704;45705;45706;45707;45708;45709;45710;45711;45712 36087;36088;36089;36090;36091;36092;36093;36094;36095;36096 36087 10 ATVEDEK Unmodified 790.37086 0.37086311 934 P11142 HSPA8 Heat shock cognate 71 kDa protein yes yes 0 0 0 By MS/MS By MS/MS 1.67 0.745 3 2 1 2 4 55.572 55.084 2 0.017603 100120 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 116.54 42.352 1128500000 463340000 665190000 0 0 0 0 0 0 0 0 0 0 0 0 0 5295 934 4808 45713;45714;45715;45716;45717;45718 36097;36098;36099;36100;36101;36102;36103;36104;36105;36106;36107;36108 36108 12 ATVEPETTPTPNPPTTEEEK Acetyl (Protein N-term) 2209.0274 0.027403127 826 P06730 EIF4E Eukaryotic translation initiation factor 4E yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.22 2.54 2 21 2 1 2 2 2 2 1 2 2 1 2 2 2 62.483 63.055 2;3 6.734E-59 76458 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 110.41 105.89 314240000 145280000 0 0 4695300 11667000 15127000 12201000 12035000 4601200 19533000 22987000 10490000 14876000 16566000 24188000 5296 826 4809 45719;45720;45721;45722;45723;45724;45725;45726;45727;45728;45729;45730;45731;45732;45733;45734;45735;45736;45737;45738;45739;45740;45741 36109;36110;36111;36112;36113;36114;36115;36116;36117;36118;36119;36120;36121;36122;36123;36124;36125;36126;36127 36114 18 ATVEQLMFEEK Unmodified 1323.6381 0.63805318 2510 Q15276 RABEP1 Rab GTPase-binding effector protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 75.666 75.23 2 2.1047E-06 93798 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.66 102.1 198860000 0 130260000 0 0 0 2211700 2376300 43937000 0 0 2966700 4870300 0 2497300 9732800 5297 2510 4810 45742;45743;45744;45745;45746;45747;45748;45749 36128;36129;36130;36131 36128 4 ATVLDLAGNAR Unmodified 1099.5986 0.59857163 4904 Q9UHL9 GTF2IRD1 General transcription factor II-I repeat domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 60.138 60.24 2 0.0047039 68240 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.828 44.684 94626000 0 0 0 4540500 5439800 6808900 5892900 4478500 0 9330200 12380000 13576000 10517000 8464200 13199000 5298 4904 4811 45750;45751;45752;45753;45754;45755;45756;45757;45758;45759;45760 36132;36133;36134;36135;36136;36137;36138;36139;36140;36141;36142 36140 10 ATVLLSMSK Unmodified 948.5314 0.53140327 2696 Q53EL6 PDCD4 Programmed cell death protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 61.634 55.649 2 0.00076164 75570 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 120.15 73.729 224380000 154740000 64946000 4695000 0 0 0 0 0 0 0 0 0 0 0 0 5299 2696 4812 45761;45762;45763 36143;36144;36145 36144 3 ATVLLSMSK Oxidation (M) 964.52632 0.52631789 2696 Q53EL6 PDCD4 Programmed cell death protein 4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 2 1 1 1 1 38.975 34.06 2 0.006414 47056 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.358 70.507 64413000 43423000 13499000 7491200 0 0 0 0 0 0 0 0 0 0 0 0 5300 2696 4812 45764;45765;45766 36146;36147;36148 36147 4350 3 ATVLNYLPK Unmodified 1017.5859 0.58588168 740 P01023;CON__ENSEMBL:ENSBTAP00000024146;P20742 A2M;PZP Alpha-2-macroglobulin;Pregnancy zone protein yes no 0 0 0 By matching By MS/MS By matching 10 0 3 1 1 1 74.297 74.208 2 0.034652 85344 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 46.426 22.454 14447000 0 0 0 2712900 0 0 0 10765000 0 0 0 0 969490 0 0 5301 740 4813 45767;45768;45769 36149 36149 1 ATVLTTER Unmodified 889.4869 0.48689592 5017 Q9UMS4 PRPF19 Pre-mRNA-processing factor 19 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 22.213 22.394 2 0.026828 22911 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 105.25 39.997 385730000 0 0 0 24473000 23305000 28446000 25134000 22281000 0 46323000 0 66292000 45529000 45829000 58120000 5302 5017 4814 45770;45771;45772;45773;45774;45775;45776;45777;45778;45779 36150;36151;36152;36153 36153 2 ATVLTTERK Unmodified 1017.5819 0.58185894 5017 Q9UMS4 PRPF19 Pre-mRNA-processing factor 19 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14.236 13.685 2 0.0058276 18121 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.48 101.64 880020000 436830000 61520000 112480000 16410000 12466000 16123000 17487000 14515000 17564000 27588000 30782000 24077000 25151000 22157000 44869000 5303 5017 4815 45780;45781;45782;45783;45784;45785;45786;45787;45788;45789;45790;45791;45792;45793;45794 36154;36155;36156;36157;36158;36159;36160 36154 2 ATVMDVKPVDYR Oxidation (M) 1408.7021 0.70205043 1221 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed yes yes 0 1 1 By MS/MS By MS/MS By matching By matching 10 0 4 1 1 1 1 37.905 38.044 3 0.0046502 42309 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 43.991 35.395 14267000 0 0 0 0 0 3645300 4473000 0 2102400 0 0 0 4046700 0 0 5304 1221 4816 45795;45796;45797;45798 36161 36161 1792 1 ATVMDVKPVDYR Unmodified 1392.7071 0.7071358 1221 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 51.711 51.942 3 0.011746 58800 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 34.685 29.369 31019000 0 0 0 0 0 0 3751900 0 0 6263200 9528800 0 5849400 5625400 0 5305 1221 4816 45799;45800;45801;45802;45803 36162;36163 36162 2 ATVMLYDDGNK Unmodified 1225.5649 0.56488824 1629 P50552 VASP Vasodilator-stimulated phosphoprotein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 46.07 45.331 2 0.0010688 51376 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 75.294 59.712 74047000 0 26026000 0 0 3473100 9948400 0 0 0 0 0 10449000 0 6002700 18148000 5306 1629 4817 45804;45805;45806;45807;45808;45809 36164;36165;36166;36167;36168;36169 36164 5 ATVMLYDDGNK Oxidation (M) 1241.5598 0.55980286 1629 P50552 VASP Vasodilator-stimulated phosphoprotein yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.43 3.02 1 2 11 1 2 1 1 1 1 1 1 1 1 1 1 1 37.779 36.858 2 0.00021683 40901 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 89.029 76.962 199470000 200570 29255000 0 11327000 13401000 0 15265000 10098000 13460000 17966000 17056000 22427000 12020000 13344000 23649000 5307 1629 4817 45810;45811;45812;45813;45814;45815;45816;45817;45818;45819;45820;45821;45822;45823 36170;36171;36172;36173;36174;36175;36176;36177;36178;36179;36180;36181;36182 36176 2611 12 ATVNLLGEEK Unmodified 1072.5764 0.57643921 2044 Q00765 REEP5 Receptor expression-enhancing protein 5 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 51.959 50.65 2 0.00054533 57202 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 127.94 96.011 1134000000 11325000 594440000 4002000 28097000 32008000 42198000 42507000 33041000 24326000 35810000 51760000 68556000 55378000 42136000 68416000 5308 2044 4818 45824;45825;45826;45827;45828;45829;45830;45831;45832;45833;45834;45835;45836;45837;45838;45839 36183;36184;36185;36186;36187;36188;36189;36190;36191;36192;36193;36194;36195;36196;36197 36184 15 ATVNQDTR Unmodified 903.44101 0.44100836 1009 P14868 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 6.2843 6.4505 2 0.030437 4235 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 55.531 35.894 9793000 0 0 0 0 0 3393700 0 1558900 1770800 0 0 0 1259000 0 1810400 5309 1009 4819 45840;45841;45842;45843;45844 36198 36198 1 ATVNTFGYIAK Unmodified 1183.6237 0.62372375 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 60.893 60.744 2 0.00028549 69226 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 108.98 100.56 172890000 0 0 0 24600000 30909000 0 37934000 53956000 25494000 0 0 0 0 0 0 5310 516 4820 45845;45846;45847;45848;45849;45850;45851;45852 36199;36200;36201;36202;36203;36204;36205;36206 36203 8 ATVPVAAATAAEGEGSPPAVAAVAGPPAAAEVGGGVGGSSR Unmodified 3483.7594 0.75938897 472 O75179 ANKRD17 Ankyrin repeat domain-containing protein 17 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 2 2 1 2 2 2 2 2 2 1 1 82.398 82.45 3;4 2.0578E-25 95215 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.639 46.879 258270000 0 0 0 3744600 19422000 6993100 14464000 26862000 17697000 39051000 33093000 37722000 0 21391000 37832000 5311 472 4821 45853;45854;45855;45856;45857;45858;45859;45860;45861;45862;45863;45864;45865;45866;45867;45868;45869;45870;45871 36207;36208;36209;36210;36211;36212;36213;36214;36215;36216;36217;36218;36219;36220 36210 14 ATVPYQLLR Unmodified 1059.6077 0.60767975 3171 Q86VQ1 GLCCI1 Glucocorticoid-induced transcript 1 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.129 71.203 2 0.017183 81589 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.902 31.699 144170000 0 0 0 8963000 8506400 8704900 10322000 11518000 8293900 12599000 14796000 19422000 10217000 9986700 20838000 5312 3171 4822 45872;45873;45874;45875;45876;45877;45878;45879;45880;45881;45882;45883 36221;36222 36222 1 ATVQAPGPPGLLDGTADDATTVDTLLASK Unmodified 2794.4236 0.42363354 2959 Q6PJG6 BRAT1 BRCA1-associated ATM activator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.56 3.47 1 2 6 3 1 1 1 1 1 1 92.669 91.507 2;3 1.6999E-06 108679 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 42.347 39.377 82560000 0 69882000 0 0 0 0 0 855470 0 4371700 2199400 1323100 0 1068600 2859900 5313 2959 4823 45884;45885;45886;45887;45888;45889;45890;45891;45892 36223;36224;36225;36226;36227 36224 5 ATVQQLEGR Acetyl (Protein N-term) 1042.5407 0.5407224 2054 Q01469 FABP5 Fatty acid-binding protein, epidermal yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.163 52.306 2 0.0010212 58129 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 92.491 51.264 1159500000 0 0 0 475930000 54738000 48953000 51774000 125250000 38817000 60870000 71664000 68058000 69359000 42007000 52117000 5314 2054 4824 45893;45894;45895;45896;45897;45898;45899;45900;45901;45902;45903;45904 36228;36229;36230;36231;36232;36233;36234;36235;36236;36237;36238 36231 11 ATVQVVILADPDGHEICFVGDEAFRELSK Unmodified 3214.5969 0.59686366 4506 Q9HC38 GLOD4 Glyoxalase domain-containing protein 4 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 96.763 90.945 4 2.032E-57 115155 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 119.8 114.75 59695000 59695000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5315 4506 4825 45905;45906 36239;36240;36241 36241 3 ATVSAPFGK Unmodified 876.47052 0.47051757 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 39.003 39.133 2 0.048015 42145 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.599 22.078 54552000 0 0 0 10870000 0 3189500 4684800 8805500 0 0 0 0 0 7648000 19355000 5316 2501 4826 45907;45908;45909;45910;45911;45912 36242 36242 1 ATVSAPTTTLK Unmodified 1088.6077 0.60773933 5048 Q9UPM8 AP4E1 AP-4 complex subunit epsilon-1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 37.677 37.762 2 0.008135 40593 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.278 29.538 11983000 0 0 0 0 2185800 2869800 2180000 0 0 0 0 0 0 0 4747700 5317 5048 4827 45913;45914;45915;45916 36243 36243 1 ATVTATTK Acetyl (Protein N-term) 833.44945 0.44944778 5077 Q9Y230 RUVBL2 RuvB-like 2 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS 6.17 4.01 1 9 1 12 5 3 3 1 1 1 1 1 1 1 1 1 1 1 1 24.664 23.806 1;2 0.00088615 22309 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 114.78 68.412 639850000 91112000 65390000 7977700 19437000 17284000 33792000 37618000 29328000 26827000 44360000 58733000 70327000 42742000 37764000 57163000 5318 5077 4828 45917;45918;45919;45920;45921;45922;45923;45924;45925;45926;45927;45928;45929;45930;45931;45932;45933;45934;45935;45936;45937;45938;45939 36244;36245;36246;36247;36248;36249;36250;36251;36252;36253;36254 36254 10 ATVTPSPVK Unmodified 898.51238 0.51238239 4349 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.75 4.01 3 3 2 12 4 3 1 1 1 1 1 1 1 1 1 1 1 1 1 36.347 35.968 2 0.00037764 93812 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 150.05 108.16 6654500000 343360000 2967000000 38516000 169180000 170600000 111970000 200450000 203780000 145870000 261240000 505140000 436320000 361390000 266640000 473070000 5319 4349 4829 45940;45941;45942;45943;45944;45945;45946;45947;45948;45949;45950;45951;45952;45953;45954;45955;45956;45957;45958;45959 36255;36256;36257;36258;36259;36260;36261;36262;36263;36264;36265;36266;36267;36268;36269;36270;36271;36272;36273;36274;36275;36276;36277 36264 20 ATVVGKPEK Unmodified 927.53893 0.53893149 4336 Q9H0R4 HDHD2 Haloacid dehalogenase-like hydrolase domain-containing protein 2 yes yes 0 0 1 By MS/MS 3 0 1 1 10.274 6.9023 2 0.0089102 9067 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 107.01 76.822 9100900 0 9100900 0 0 0 0 0 0 0 0 0 0 0 0 0 5320 4336 4830 45960 36278 36278 0 ATVYAQLVESGR Unmodified 1292.6725 0.67246486 4670 Q9NVM4 PRMT7 Protein arginine N-methyltransferase 7 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 61.841 62.104 2 0.0079638 71062 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 49.5 29.214 29959000 0 0 0 0 0 4459100 0 3683700 0 4659500 0 4421500 0 3963400 8771800 5321 4670 4831 45961;45962;45963;45964;45965;45966 36279 36279 1 ATWAVPTVR Unmodified 999.55016 0.55016488 2959 Q6PJG6 BRAT1 BRCA1-associated ATM activator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 64.252 64.301 2 0.0077875 73311 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 71.501 62.154 67838000 0 0 0 3193300 4495700 9360800 5695600 5998600 3290900 7155200 7123700 8203500 6177300 7143600 0 5322 2959 4832 45967;45968;45969;45970;45971;45972;45973;45974;45975;45976;45977 36280;36281;36282;36283;36284;36285;36286;36287;36288 36286 9 ATYINLK Unmodified 821.4647 0.46470391 4392 Q9H467 CUEDC2 CUE domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 42.808 42.994 2 0.034226 48180 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 71.378 39.799 55175000 0 0 0 0 4206900 0 5837700 5146800 4639200 5761600 7009700 0 0 5844600 16728000 5323 4392 4833 45978;45979;45980;45981;45982;45983;45984;45985 36289 36289 1 ATYLEFIQQNEER Acetyl (Protein N-term) 1681.7948 0.79476484 2537 Q15437 SEC23B Protein transport protein Sec23B yes yes 1 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 93.384 93.508 2 0.0013175 108374 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.303 45.277 2638100 0 0 0 0 0 0 0 0 0 956030 0 0 0 491670 1190400 5324 2537 4834 45986;45987;45988 36290;36291 36291 2 ATYLEMLDK Unmodified 1082.5318 0.5317972 3087 Q7Z3U7 MON2 Protein MON2 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 77.788 73.013 2 0.032354 90972 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.305 50.77 47517000 0 47517000 0 0 0 0 0 0 0 0 0 0 0 0 0 5325 3087 4835 45989 36292 36292 1 ATYREHVEAIK Unmodified 1315.6884 0.68844927 629 O95229 ZWINT ZW10 interactor yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 22.624 22.096 3 0.0030251 33912 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.11 38.879 155520000 86228000 0 0 6681200 0 11637000 10627000 0 8924100 11587000 0 6242900 0 0 13593000 5326 629 4836 45990;45991;45992;45993;45994;45995;45996;45997 36293;36294;36295 36295 3 AVAAAAAAAVTPAAIAAATTTLAQEEPVAAPEPK Unmodified 3113.6608 0.66084412 3279 Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 yes yes 0 0 0 By MS/MS By MS/MS 6.5 3.5 1 1 1 1 96.743 95.149 3 5.6339E-50 111778 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 81.697 79.474 9560900 0 3788000 0 0 0 0 0 0 0 5773000 0 0 0 0 0 5327 3279 4837 45998;45999 36296;36297;36298 36297 3 AVAAATYK Unmodified 793.4334 0.43340378 2475 Q15020 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.043 14.206 2 0.022664 12704 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 60.972 18.253 82674000 0 0 0 3754000 4749100 6037900 6135100 4576400 4426500 6970100 5778000 7732700 10351000 11831000 10332000 5328 2475 4838 46000;46001;46002;46003;46004;46005;46006;46007;46008;46009;46010;46011 36299;36300;36301 36301 3 AVAAAYTFLQR Unmodified 1209.6506 0.6506072 3661 Q92791 LEPREL4 Synaptonemal complex protein SC65 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 72.419 72.582 2 0.015759 82882 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.916 41.254 28297000 0 0 0 0 0 9886500 0 0 6502000 0 0 0 6351400 0 5556800 5329 3661 4839 46012;46013;46014;46015 36302 36302 1 AVAALDGAK Unmodified 814.45487 0.45486751 1325 P32929 CTH Cystathionine gamma-lyase yes yes 0 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 1 3 25.155 20.75 1;2 0.018069 27399 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.83 37.76 866450000 30685000 835760000 0 0 0 0 0 0 0 0 0 0 0 0 0 5330 1325 4840 46016;46017;46018;46019 36303;36304;36305 36304 2 AVAALLTIPEAEK Unmodified 1324.7602 0.76021723 3170 Q86VP6 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 80.063 80.121 2;3 2.604E-09 92604 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 134.59 123.76 836460000 0 0 0 32519000 31673000 110120000 57024000 34610000 30677000 89947000 87072000 77463000 50119000 66803000 168430000 5331 3170 4841 46020;46021;46022;46023;46024;46025;46026;46027;46028;46029;46030;46031;46032;46033;46034;46035;46036;46037;46038;46039;46040;46041;46042;46043 36306;36307;36308;36309;36310;36311;36312;36313;36314;36315;36316;36317;36318 36312 12 AVAAVAATGPASAPGPGGGR Unmodified 1633.8536 0.85361712 504 O75474 FRAT2 GSK-3-binding protein FRAT2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 2 1 43.902 43.696 2 5.804E-21 48951 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 90.926 76.465 13339000 0 0 0 2296900 3007400 0 3755700 0 0 4279100 0 0 0 0 0 5332 504 4842 46044;46045;46046;46047;46048;46049;46050;46051 36319;36320;36321;36322;36323;36324;36325 36324 7 AVAAYLR Unmodified 762.43882 0.43882351 271 O15294 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 35.346 35.461 2 0.023373 39042 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 88.627 10.721 86066000 0 0 0 4657200 7632400 8563200 7170500 8560200 6675200 12568000 11619000 9785900 8834600 0 0 5333 271 4843 46052;46053;46054;46055;46056;46057;46058;46059;46060;46061;46062 36326;36327;36328;36329;36330;36331;36332 36326 7 AVACSGAAQVR Unmodified 1088.5397 0.53967654 3663 Q92797 SYMPK Symplekin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 15.968 16.082 2 0.011182 15937 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 48.794 28.274 34165000 0 0 0 0 5272400 0 6998400 7796800 0 0 14097000 0 0 0 0 5334 3663 4844 46063;46064;46065;46066 36333;36334;36335;36336 36336 4 AVACSGAAQVRIK Unmodified 1329.7187 0.71870354 3663 Q92797 SYMPK Symplekin yes yes 0 0 1 By MS/MS 2 0 1 1 37.473 30.975 3 0.021741 43065 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.083 20.452 7503500 7503500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5335 3663 4845 46067 36337 36337 1 AVADAIRTSLGPK Unmodified 1297.7354 0.73539946 1642 P50991 CCT4 T-complex protein 1 subunit delta yes yes 0 0 1 By MS/MS By MS/MS 2.4 0.49 3 2 2 3 60.616 54.595 2;3 0.00315 70740 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.924 47.168 392580000 292650000 99932000 0 0 0 0 0 0 0 0 0 0 0 0 0 5336 1642 4846 46068;46069;46070;46071;46072 36338;36339;36340;36341 36338 4 AVADLALIPDVDIDSDGVFK Acetyl (Protein N-term) 2114.0783 0.078316486 4613 Q9NRX4 PHPT1 14 kDa phosphohistidine phosphatase yes yes 1 0 0 By MS/MS By MS/MS By MS/MS 2.27 0.445 8 3 3 7 1 101.61 96.799 2;3 1.7955E-20 122014 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.56 99.532 180750000 69379000 109400000 1971000 0 0 0 0 0 0 0 0 0 0 0 0 5337 4613 4847 46073;46074;46075;46076;46077;46078;46079;46080;46081;46082;46083 36342;36343;36344;36345;36346;36347;36348;36349;36350;36351;36352;36353;36354 36346 13 AVADQVYGDQDMHEVVRK Unmodified 2058.9793 0.97928792 3849 Q96G74 OTUD5 OTU domain-containing protein 5 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 46.037 46.54 4 0.00031094 51255 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.353 38.065 43550000 0 0 0 0 0 0 0 0 0 0 6961900 13503000 5887400 4563100 12634000 5338 3849 4848 46084;46085;46086;46087;46088 36355;36356;36357 36355 3 AVADTGSEDQGPGTGELTAVHK Unmodified 2139.008 0.008005089 4399 Q9H4I2 ZHX3 Zinc fingers and homeoboxes protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 44.091 44.207 3 3.2622E-13 48468 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.853 60.738 50978000 0 0 0 0 8366000 0 12946000 11512000 0 0 0 0 0 0 18154000 5339 4399 4849 46089;46090;46091;46092;46093 36358;36359;36360;36361;36362 36360 5 AVAEQIPLLVQGVR Unmodified 1491.8773 0.87731267 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 84.775 84.84 2;3 1.0387E-23 98055 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 119.39 110.38 482220000 0 0 0 13220000 21659000 63039000 28519000 29253000 24061000 66680000 40415000 49415000 30830000 32978000 82152000 5340 5187 4850 46094;46095;46096;46097;46098;46099;46100;46101;46102;46103;46104;46105;46106;46107;46108;46109;46110;46111;46112;46113;46114;46115;46116;46117 36363;36364;36365;36366;36367;36368;36369;36370;36371;36372;36373;36374;36375;36376;36377;36378;36379;36380;36381;36382 36370 17 AVAEQVLHSQSR Unmodified 1323.6895 0.6895119 2063 Q01804 OTUD4 OTU domain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 2 1 1 1 1 29.098 29.313 2;3 0.00066017 31855 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 71.176 55.788 57392000 0 0 0 4368300 3922900 0 5218700 0 0 0 11799000 12573000 0 6090300 13420000 5341 2063 4851 46118;46119;46120;46121;46122;46123;46124;46125 36383;36384;36385;36386;36387;36388;36389;36390 36383 8 AVAEVSESTK Unmodified 1019.5135 0.5135046 4408 Q9H5N1 RABEP2 Rab GTPase-binding effector protein 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 14.65 14.858 2 0.0052216 14312 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 69.825 44.374 22078000 0 0 0 2499600 0 0 2522100 0 2513500 0 4341300 5633400 0 4568500 0 5342 4408 4852 46126;46127;46128;46129;46130;46131 36391;36392;36393 36393 3 AVAFMDQVR Oxidation (M) 1051.5121 0.51206481 922 P10588 NR2F6 Nuclear receptor subfamily 2 group F member 6 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 6 1 1 1 1 1 1 39.536 39.665 2 0.0072069 44372 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 63.565 34.416 12163000 0 0 0 0 0 3031700 3546500 0 1909000 0 0 0 0 3675800 0 5343 922 4853 46132;46133;46134;46135;46136;46137 36394;36395;36396;36397 36394 1187 4 AVAFMDQVR Unmodified 1035.5172 0.51715019 922 P10588 NR2F6 Nuclear receptor subfamily 2 group F member 6 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 57.417 57.581 2 0.018501 64523 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.776 37.411 22744000 0 0 0 0 8106000 0 0 0 0 0 4990100 0 0 0 9648000 5344 922 4853 46138;46139;46140 36398;36399;36400;36401 36398 4 AVAFSPVTELK Unmodified 1160.6441 0.64412484 1063 P17858 PFKL ATP-dependent 6-phosphofructokinase, liver type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 73.469 72.789 2 0.00030272 83515 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 102.62 67.184 4022700000 0 2165000000 61711000 85249000 102410000 175270000 95987000 112370000 109380000 192400000 166570000 166810000 160980000 169980000 258580000 5345 1063 4854 46141;46142;46143;46144;46145;46146;46147;46148;46149;46150;46151;46152;46153;46154;46155 36402;36403;36404;36405;36406;36407;36408;36409;36410;36411;36412;36413;36414;36415;36416;36417 36403 15 AVAFSPVTELKK Unmodified 1288.7391 0.73908786 1063 P17858 PFKL ATP-dependent 6-phosphofructokinase, liver type yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.91 3.42 2 1 8 1 2 1 1 1 1 1 1 1 1 62.496 60.765 3 0.0095165 83408 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.005 45.971 340090000 79038000 29301000 0 32217000 28398000 12380000 45477000 30619000 13431000 29974000 39255000 0 0 0 0 5346 1063 4855 46156;46157;46158;46159;46160;46161;46162;46163;46164;46165;46166 36418;36419;36420;36421;36422;36423;36424 36421 5 AVAGEYSDPVTLETK Unmodified 1578.7777 0.77771779 4229 Q9BXM9 FSD1L FSD1-like protein yes yes 0 0 0 By MS/MS 2 0 1 1 64.27 58.362 2 0.0012412 74781 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.289 62.296 10066000 0 10066000 0 0 0 0 0 0 0 0 0 0 0 0 0 5347 4229 4856 46167 36425 36425 1 AVAGNISDPGLQK Unmodified 1268.6725 0.67246486 1073 P18206 VCL Vinculin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 7.5 3.72 1 3 1 11 2 2 1 1 1 1 1 1 1 1 1 1 1 1 46.026 45.138 2 8.7587E-30 51176 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 163.64 112.57 1471100000 57705000 845460000 5296200 48599000 17468000 68901000 31686000 24893000 15140000 49683000 76313000 66430000 33260000 0 130270000 5348 1073 4857 46168;46169;46170;46171;46172;46173;46174;46175;46176;46177;46178;46179;46180;46181;46182;46183 36426;36427;36428;36429;36430;36431;36432;36433;36434;36435;36436;36437;36438;36439;36440;36441;36442;36443;36444;36445;36446;36447;36448;36449;36450 36430 18 AVAGQQQASVTAGK Unmodified 1314.6892 0.68917755 2479 Q15025 TNIP1 TNFAIP3-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 17.468 17.652 2 6.0051E-06 17244 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 113.93 78.631 47410000 0 0 0 2137200 3575000 2934300 3311300 3098300 3263300 3979100 4140600 4719700 5374800 4230700 6645700 5349 2479 4858 46184;46185;46186;46187;46188;46189;46190;46191;46192;46193;46194;46195 36451;36452;36453;36454;36455;36456;36457;36458;36459;36460;36461 36459 11 AVAHHTDCTFIR Unmodified 1426.6776 0.67756701 1876 P62195 PSMC5 26S protease regulatory subunit 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 24.696 24.921 3 0.0021769 26796 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 51.211 38.203 123950000 0 0 0 6838700 11257000 14268000 0 0 3454100 16652000 19652000 25472000 6695400 7818500 11846000 5350 1876 4859 46196;46197;46198;46199;46200;46201;46202;46203;46204;46205 36462;36463;36464;36465;36466;36467;36468;36469 36468 6 AVAHHTTAAFIR Unmodified 1293.6942 0.69420335 1482 P43686 PSMC4 26S protease regulatory subunit 6B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 2 2 25.794 26.062 2;3 1.5855E-05 27576 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 80.245 72.358 397940000 0 0 0 17829000 32465000 64575000 14421000 15029000 0 50561000 60293000 106740000 0 0 36030000 5351 1482 4860 46206;46207;46208;46209;46210;46211;46212;46213;46214;46215;46216 36470;36471;36472;36473;36474;36475;36476;36477;36478;36479;36480;36481;36482;36483 36471 12 AVAIDLPGLGHSK Unmodified 1276.7139 0.71393574 3882 Q96IU4 ABHD14B Alpha/beta hydrolase domain-containing protein 14B yes yes 0 0 0 By MS/MS 10 0 1 1 71.738 71.718 3 0.0076202 82295 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 32.439 22.113 32974000 0 0 0 0 0 32974000 0 0 0 0 0 0 0 0 0 5352 3882 4861 46217 36484 36484 1 AVAISLPK Unmodified 797.50109 0.50108942 1624 P50454 SERPINH1 Serpin H1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 59.23 57.899 2 0.023017 65877 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 60.682 32.977 2775700000 113460000 2156100000 33970000 19139000 23433000 29132000 32150000 27432000 26709000 36463000 45558000 52587000 30742000 38112000 110690000 5353 1624 4862 46218;46219;46220;46221;46222;46223;46224;46225;46226;46227;46228;46229;46230;46231;46232;46233 36485;36486;36487;36488;36489;36490 36490 6 AVALDSDNISLK Unmodified 1244.6612 0.66123147 3432 Q8NEY1 NAV1 Neuron navigator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 62.54 62.175 2 0.0009629 71206 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 72.006 46.067 251630000 0 77958000 0 10266000 11099000 12833000 11335000 13818000 10743000 16665000 18649000 18149000 15864000 11032000 23220000 5354 3432 4863 46234;46235;46236;46237;46238;46239;46240;46241;46242;46243;46244;46245;46246 36491;36492;36493;36494;36495;36496;36497;36498;36499;36500;36501;36502;36503;36504;36505 36491 15 AVALDTYEK Unmodified 1008.5128 0.51277632 4471 Q9H9E3 COG4 Conserved oligomeric Golgi complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 37.923 38.115 2 0.0052256 41033 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 79.713 30.271 59316000 0 0 0 0 3978100 6180800 4463600 5666100 3211000 6378600 5357600 7261700 10749000 6069000 0 5355 4471 4864 46247;46248;46249;46250;46251;46252;46253;46254;46255;46256;46257 36506;36507;36508;36509;36510;36511;36512;36513 36510 8 AVALERAIDEK Unmodified 1213.6667 0.6666512 2817 Q5VU43 PDE4DIP Myomegalin yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 47.852 43.102 3 0.037734 54033 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 49.3 20.343 16234000 0 8810800 7422800 0 0 0 0 0 0 0 0 0 0 0 0 5356 2817 4865 46258;46259 36514 36514 1 AVALYFEDK Unmodified 1054.5335 0.53351176 5052 Q9UPN9 TRIM33 E3 ubiquitin-protein ligase TRIM33 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 64.165 63.639 2 0.0083679 72194 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 69.825 53.049 73637000 0 0 3947900 0 9054000 0 11874000 0 10790000 0 18751000 19221000 0 0 0 5357 5052 4866 46260;46261;46262;46263;46264;46265 36515;36516;36517;36518 36517 3 AVALYFIDK Unmodified 1038.575 0.57498264 945 P11387;Q969P6 TOP1;TOP1MT DNA topoisomerase 1;DNA topoisomerase I, mitochondrial yes no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 78.344 78.45 2 0.0085067 90618 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 69.423 40.525 77558000 0 0 0 0 3564400 6599100 5424800 6072200 4850000 7703800 7612000 14166000 4837500 4893000 11835000 5358 945 4867 46266;46267;46268;46269;46270;46271;46272;46273;46274;46275;46276 36519;36520;36521;36522;36523;36524;36525;36526;36527;36528 36519 10 AVANQTSATFLR Unmodified 1277.6728 0.67279921 1875 P62191 PSMC1 26S protease regulatory subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.694 49.85 2 1.2121E-14 56618 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 155.42 124.35 1018700000 0 0 0 94152000 109650000 92334000 43860000 37757000 31887000 128360000 162870000 169560000 32738000 32385000 83196000 5359 1875 4868 46277;46278;46279;46280;46281;46282;46283;46284;46285;46286;46287;46288 36529;36530;36531;36532;36533;36534;36535;36536;36537;36538;36539;36540;36541;36542;36543;36544;36545;36546;36547 36532 19 AVANTMR Unmodified 761.38541 0.38540773 1548 P48643 CCT5 T-complex protein 1 subunit epsilon yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 8.0037 8.118 2 0.023669 6520 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 84.359 27.849 55362000 0 0 0 0 4249000 12068000 7303000 7232100 5062900 4231500 11711000 0 3504400 0 0 5360 1548 4869 46289;46290;46291;46292;46293;46294;46295;46296 36548;36549 36549 2 AVANTMRTSLGPNGLDK Oxidation (M) 1759.8887 0.888682 1548 P48643 CCT5 T-complex protein 1 subunit epsilon yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 42.776 37.568 3 2.2749E-09 47517 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 103.5 84.214 466190000 416670000 29895000 19625000 0 0 0 0 0 0 0 0 0 0 0 0 5361 1548 4870 46297;46298;46299 36550;36551;36552;36553 36553 2457 4 AVANTMRTSLGPNGLDK Unmodified 1743.8938 0.89376737 1548 P48643 CCT5 T-complex protein 1 subunit epsilon yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 56.598 50.547 3 0.012677 63108 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 37.177 14.186 558850000 552830000 0 6023500 0 0 0 0 0 0 0 0 0 0 0 0 5362 1548 4870 46300;46301 36554;36555 36555 2 AVANYDSVEEGEK Unmodified 1409.6311 0.63105355 1667 P51659 HSD17B4 Peroxisomal multifunctional enzyme type 2;(3R)-hydroxyacyl-CoA dehydrogenase;Enoyl-CoA hydratase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.595 32.78 2 1.2844E-07 36282 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 116.77 94.68 117840000 0 0 0 13483000 6467000 9010800 8636400 13049000 6760100 12614000 10420000 14406000 6778200 5608400 10603000 5363 1667 4871 46302;46303;46304;46305;46306;46307;46308;46309;46310;46311;46312;46313 36556;36557;36558;36559;36560;36561;36562;36563;36564;36565 36564 10 AVAQALEVIPR Unmodified 1165.6819 0.68190733 1570 P49368 CCT3 T-complex protein 1 subunit gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 72.758 72.824 2;3 1.4067E-05 84028 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 161.79 134.54 3431500000 0 0 0 157150000 222420000 301340000 212510000 255350000 169860000 360670000 352590000 409520000 256370000 268170000 465580000 5364 1570 4872 46314;46315;46316;46317;46318;46319;46320;46321;46322;46323;46324;46325;46326;46327;46328;46329;46330;46331;46332;46333;46334;46335;46336;46337 36566;36567;36568;36569;36570;36571;36572;36573;36574;36575;36576;36577;36578;36579;36580;36581;36582;36583;36584;36585;36586;36587;36588;36589;36590;36591;36592 36567 16 AVAQATGR Unmodified 772.41915 0.4191507 1081 P18858 LIG1 DNA ligase 1 yes yes 0 0 0 By MS/MS 2 0 1 1 5.7872 2.5468 2 0.016257 4557 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.47 35.368 42543000 0 42543000 0 0 0 0 0 0 0 0 0 0 0 0 0 5365 1081 4873 46338 36593 36593 1 AVAQATGRQLESVRAEAAEK Unmodified 2084.0974 0.097429219 1081 P18858 LIG1 DNA ligase 1 yes yes 0 0 2 By MS/MS 2 0 2 2 51.374 43.412 3;4 0.00076806 59755 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.036 40.094 108370000 108370000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5366 1081 4874 46339;46340 36594;36595 36594 1 AVASAAAALVLK Unmodified 1083.6652 0.66519463 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 5.25 3.7 3 2 3 2 2 1 1 1 1 77.244 74.01 2 0.0002637 74427 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 95.502 59.106 361450000 99444000 240730000 9844400 0 0 9475800 0 0 1956900 0 0 0 0 0 0 5367 5187 4875 46341;46342;46343;46344;46345;46346;46347;46348 36596;36597;36598;36599;36600;36601;36602;36603;36604;36605;36606;36607 36599 12 AVASDFYLR Acetyl (Protein N-term) 1082.5397 0.53965977 3734 Q96A72 MAGOHB Protein mago nashi homolog 2 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 83.077 82.771 2 0.0011468 95526 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 108.46 92.307 232150000 0 20328000 0 5348300 12395000 12249000 11271000 13570000 7801400 16843000 24960000 20929000 16819000 23058000 46584000 5368 3734 4876 46349;46350;46351;46352;46353;46354;46355;46356;46357;46358;46359;46360;46361 36608;36609;36610;36611;36612;36613;36614;36615;36616;36617;36618;36619;36620 36612 13 AVASEIFK Unmodified 863.47527 0.4752686 121 O00159 MYO1C Unconventional myosin-Ic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 7 3.69 1 1 3 2 1 1 1 50.439 48.659 2 0.025333 54270 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 58.782 12.83 148340000 0 97768000 0 0 0 0 0 0 0 0 0 19644000 19321000 0 11608000 5369 121 4877 46362;46363;46364;46365;46366 36621;36622;36623 36622 3 AVASLPPEQMFELMK 2 Oxidation (M) 1721.8368 0.83682935 1329;4333 P33240;Q9H0L4 CSTF2;CSTF2T Cleavage stimulation factor subunit 2;Cleavage stimulation factor subunit 2 tau variant no no 0 2 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 74.477 74.654 2 0.0017126 85662 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 42.395 29.042 26356000 0 0 0 0 0 5248400 4794600 0 0 0 7271900 0 0 0 9041300 5370 1329;4333 4878 46367;46368;46369;46370 36624 36624 1982;1983 1 AVASLPPEQMFELMK Oxidation (M) 1705.8419 0.84191472 1329;4333 P33240;Q9H0L4 CSTF2;CSTF2T Cleavage stimulation factor subunit 2;Cleavage stimulation factor subunit 2 tau variant no no 0 1 0 By MS/MS 2 0 2 2 88.267 83.425 2 1.1782E-15 103663 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.09 100.07 62549000 0 62549000 0 0 0 0 0 0 0 0 0 0 0 0 0 5371 1329;4333 4878 46371;46372 36625;36626 36625 1982;1983 2 AVASLPPEQMFELMK Unmodified 1689.847 0.8470001 1329;4333 P33240;Q9H0L4 CSTF2;CSTF2T Cleavage stimulation factor subunit 2;Cleavage stimulation factor subunit 2 tau variant no no 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 93.924 91.531 2 1.9291E-15 113492 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 142.08 116.02 197600000 0 189850000 895250 0 0 0 0 0 0 0 0 0 0 0 6852800 5372 1329;4333 4878 46373;46374;46375 36627;36628;36629 36627 3 AVASLSVK Unmodified 773.4647 0.46470391 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 30.306 30.483 2 0.012232 33519 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 75.109 20.584 2032900000 0 0 0 124450000 101090000 149270000 133030000 158500000 117750000 206480000 188060000 180790000 198820000 0 474670000 5373 965 4879 46376;46377;46378;46379;46380;46381;46382;46383;46384;46385;46386 36630;36631;36632;36633 36630 4 AVASPEATVSQTDENK Unmodified 1645.7795 0.7795087 2840;5195 Q641Q2;Q9Y4E1 FAM21A;FAM21C WASH complex subunit FAM21A;WASH complex subunit FAM21C no no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.835 32.021 2 3.5851E-31 34824 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 146.07 129.05 150550000 0 0 0 7593000 10941000 11713000 10971000 7001100 6721900 13076000 13407000 22371000 11537000 11143000 24077000 5374 2840;5195 4880 46387;46388;46389;46390;46391;46392;46393;46394;46395;46396;46397;46398 36634;36635;36636;36637;36638;36639;36640;36641;36642;36643;36644 36640 11 AVASQLGLLDEIK Unmodified 1355.766 0.76603089 2758 Q5SVZ6 ZMYM1 Zinc finger MYM-type protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 83.161 83.268 2 0.012743 95588 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 56.404 42.41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5375 2758 4881 46399 36645 36645 1 AVASQPDSVDAAER Unmodified 1414.6688 0.66883604 4666 Q9NVE7 PANK4 Pantothenate kinase 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 27.345 27.136 2 5.8845E-20 29242 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 141.08 115.15 44884000 0 0 0 17877000 22327000 4679700 0 0 0 0 0 0 0 0 0 5376 4666 4882 46400;46401;46402 36646;36647;36648 36648 3 AVASQPDSVDAAERAEK Unmodified 1742.8435 0.84350594 4666 Q9NVE7 PANK4 Pantothenate kinase 4 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 30.305 29.902 3 7.1014E-05 32686 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 64.52 59.428 26506000 0 0 0 0 26506000 0 0 0 0 0 0 0 0 0 0 5377 4666 4883 46403;46404 36649;36650 36650 2 AVASSCSYLHEASLK Unmodified 1621.777 0.77700628 3273 Q8IY45 AMN1 Protein AMN1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 55.151 49.182 3 0.00024098 66828 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.771 72.569 36682000 14306000 18624000 3751900 0 0 0 0 0 0 0 0 0 0 0 0 5378 3273 4884 46405;46406;46407 36651;36652;36653 36652 3 AVASSPAATNSEVK Unmodified 1330.6729 0.67285879 4801 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.937 21.144 2 1.1008E-05 21416 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 107.06 91.393 137680000 0 0 0 8339000 8117400 10450000 12228000 7638100 10610000 13817000 12489000 11679000 12891000 12942000 16477000 5379 4801 4885 46408;46409;46410;46411;46412;46413;46414;46415;46416;46417;46418;46419 36654;36655;36656;36657;36658;36659;36660;36661;36662;36663;36664;36665 36659 12 AVATEANNSTFFSISSSDLVSK Unmodified 2274.1016 0.10157112 484 O75351 VPS4B Vacuolar protein sorting-associated protein 4B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.29 0.452 5 2 1 4 2 86.959 82.798 2;3 7.8977E-32 103887 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 150.59 146.04 159620000 5253500 144100000 10268000 0 0 0 0 0 0 0 0 0 0 0 0 5380 484 4886 46420;46421;46422;46423;46424;46425;46426 36666;36667;36668;36669;36670;36671 36667 6 AVATEANNSTFFSVSSSDLMSK Unmodified 2292.058 0.057991749 5026 Q9UN37 VPS4A Vacuolar protein sorting-associated protein 4A yes yes 0 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 3 1 85.385 81.579 2;3 9.7663E-80 101325 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 206.43 179.34 74693000 0 73690000 1003000 0 0 0 0 0 0 0 0 0 0 0 0 5381 5026 4887 46427;46428;46429;46430 36672;36673;36674;36675 36674 3 AVATSQLQK Unmodified 944.5291 0.52909508 2462 Q149N8 SHPRH E3 ubiquitin-protein ligase SHPRH yes yes 0 0 0 By MS/MS 2 0 1 1 19.069 15.586 2 0.029807 20376 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.799 24.907 15057000 0 15057000 0 0 0 0 0 0 0 0 0 0 0 0 0 5382 2462 4888 46431 36676 36676 1 AVATWHANTEREQK Unmodified 1639.8067 0.80666693 1655 P51531 SMARCA2 Probable global transcription activator SNF2L2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 3 9 3 1 1 1 1 1 1 1 1 1 20.114 18.967 3 0.00045931 27764 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.905 70.984 68019000 38272000 0 0 2427900 1791600 0 2322700 2279500 3290600 3218400 5211200 0 0 2263000 6943000 5383 1655 4889 46432;46433;46434;46435;46436;46437;46438;46439;46440;46441;46442;46443 36677;36678;36679;36680;36681;36682;36683;36684 36679 8 AVATYHANTER Unmodified 1231.5945 0.59454889 1656 P51532 SMARCA4 Transcription activator BRG1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 2 2 2 2 2 1 2 2 2 2 2 12.078 12.238 2;3 0.0027105 11440 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.435 44.348 109210000 0 0 0 1269100 7227000 18039000 7221300 6510100 6729000 2138200 8566900 13326000 9804300 9392700 18988000 5384 1656 4890 46444;46445;46446;46447;46448;46449;46450;46451;46452;46453;46454;46455;46456;46457;46458;46459;46460;46461;46462;46463;46464;46465 36685;36686;36687;36688;36689;36690;36691;36692;36693;36694;36695 36685 11 AVATYHANTEREQK Unmodified 1616.7907 0.79068251 1656 P51532 SMARCA4 Transcription activator BRG1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.52 3.11 5 22 2 1 2 2 2 2 1 2 2 2 1 2 2 2 2 10.07 9.5852 3;4 8.8419E-12 7674 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 92.295 87.966 830530000 620380000 5419800 49049000 14446000 9379600 11313000 6685600 11437000 7198600 10431000 15363000 25526000 13307000 12735000 17863000 5385 1656 4891 46466;46467;46468;46469;46470;46471;46472;46473;46474;46475;46476;46477;46478;46479;46480;46481;46482;46483;46484;46485;46486;46487;46488;46489;46490;46491;46492 36696;36697;36698;36699;36700;36701;36702;36703;36704;36705;36706 36704 7 AVAVAMAGALIGSEPGPAEELAK Acetyl (Protein N-term) 2193.1351 0.13511986 2414 Q14562 DHX8 ATP-dependent RNA helicase DHX8 yes yes 1 0 0 By MS/MS 2.33 0.471 2 1 3 102.59 98.254 2;3 1.072E-50 121434 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.76 111.97 35771000 0 35771000 0 0 0 0 0 0 0 0 0 0 0 0 0 5386 2414 4892 46493;46494;46495 36707;36708;36709 36708 2 AVAVRTLQEQLEK Acetyl (Protein N-term) 1525.8464 0.84640648 4376 Q9H307 PNN Pinin yes yes 1 0 1 By MS/MS By MS/MS 2 0 2 1 1 91.245 83.114 2 1.5245E-104 107807 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 232.17 196.75 82697000 82697000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5387 4376 4893 46496;46497 36710;36711 36711 2 AVAVVVDPIQSVK Unmodified 1323.7762 0.77620165 161 O00487 PSMD14 26S proteasome non-ATPase regulatory subunit 14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.865 74.929 2 3.5193E-09 85375 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 119.16 105.8 852640000 0 0 0 39859000 73383000 82265000 24588000 28969000 15609000 162260000 143430000 159810000 18593000 25258000 78616000 5388 161 4894 46498;46499;46500;46501;46502;46503;46504;46505;46506;46507;46508;46509 36712;36713;36714;36715;36716;36717;36718;36719;36720;36721;36722;36723 36719 12 AVCEADQSHGGPR Unmodified 1382.5997 0.59971062 186 O14545 TRAFD1 TRAF-type zinc finger domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 7.7589 7.8895 2;3 2.6877E-09 6462 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 93.011 86.978 282060000 0 0 0 8392300 8212400 8606300 1848600 2459200 11534000 21154000 82157000 47221000 24770000 26536000 39174000 5389 186 4895 46510;46511;46512;46513;46514;46515;46516;46517;46518;46519;46520;46521;46522;46523;46524;46525;46526;46527;46528;46529;46530;46531;46532;46533 36724;36725;36726;36727;36728;36729;36730;36731;36732;36733;36734;36735;36736 36734 13 AVCESFHLAK Unmodified 1160.5648 0.56482866 4477 Q9H9T3 ELP3 Elongator complex protein 3 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 49.627 42.853 3 0.018159 59066 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.1 50.338 123990000 105960000 18037000 0 0 0 0 0 0 0 0 0 0 0 0 0 5390 4477 4896 46534;46535 36737 36737 0 AVCIAVIAK Acetyl (Protein N-term) 985.56304 0.56303775 4986 Q9UL33 TRAPPC2L Trafficking protein particle complex subunit 2-like protein yes yes 1 0 0 By MS/MS 1 0 1 1 105.75 111.02 2 0.0033353 91533 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 82.305 73.483 24915000 24915000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5391 4986 4897 46536 36738 36738 1 AVCLEFSPK Unmodified 1049.5216 0.52156686 4242 Q9BY44 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 68.16 61.055 2 0.0096112 78190 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.833 86.833 134650000 4487200 130170000 0 0 0 0 0 0 0 0 0 0 0 0 0 5392 4242 4898 46537;46538 36739;36740 36739 2 AVCLLTGASR Unmodified 1046.5543 0.55426398 1352 P35270 SPR Sepiapterin reductase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 48.182 48.414 2 0.005999 54598 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 66.692 30.122 187500000 0 0 0 0 13667000 8358700 9709300 14606000 6304700 19761000 26591000 28746000 19532000 23657000 16569000 5393 1352 4899 46539;46540;46541;46542;46543;46544;46545;46546;46547;46548;46549 36741;36742;36743;36744;36745;36746;36747;36748;36749;36750;36751;36752 36744 11 AVCMLSNTTAIAEAWAR Oxidation (M) 1879.8921 0.89205282 1961;3031;1962 P68363;Q71U36;P0DPH8;P0DPH7;Q6PEY2;Q9NY65;P68366 TUBA1B;TUBA1A;TUBA3E;TUBA8;TUBA4A Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-8 chain;Tubulin alpha-4A chain no no 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 17 1 1 1 2 2 1 2 1 2 1 1 2 81.329 81.452 2;3 9.4778E-112 94149 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 197.3 178.17 282540000 0 0 0 0 9260200 12265000 9177600 48086000 9228200 48833000 22795000 33939000 7438900 11879000 69637000 5394 1961;3031;1962 4900 46550;46551;46552;46553;46554;46555;46556;46557;46558;46559;46560;46561;46562;46563;46564;46565;46566 36753;36754;36755;36756;36757;36758;36759;36760;36761;36762;36763;36764 36754 3152 10 AVCMLSNTTAIAEAWAR Unmodified 1863.8971 0.89713819 1961;3031;1962 P68363;Q71U36;P0DPH8;P0DPH7;Q6PEY2;Q9NY65;P68366 TUBA1B;TUBA1A;TUBA3E;TUBA8;TUBA4A Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-8 chain;Tubulin alpha-4A chain no no 0 0 0 By MS/MS 10 0 2 2 87.867 88.017 2;3 3.0533E-07 101790 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 103.88 89.004 6907500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6907500 5395 1961;3031;1962 4900 46567;46568 36765;36766 36765 1 AVCMLSNTTAVAEAWAR Oxidation (M) 1865.8764 0.87640275 4093 Q9BQE3 TUBA1C Tubulin alpha-1C chain yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 2 1 2 1 2 1 1 1 1 1 1 2 77.195 77.241 2;3 8.4322E-78 89171 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 182.08 164.71 174230000 0 0 0 4377300 7958100 16669000 5475900 20908000 6199400 11036000 17020000 18422000 6355400 11809000 47997000 5396 4093 4901 46569;46570;46571;46572;46573;46574;46575;46576;46577;46578;46579;46580;46581;46582;46583;46584 36767;36768;36769;36770;36771;36772;36773;36774;36775;36776;36777;36778;36779;36780;36781 36779 5594 14 AVCMLSNTTAVAEAWAR Unmodified 1849.8815 0.88148813 4093 Q9BQE3 TUBA1C Tubulin alpha-1C chain yes yes 0 0 0 By MS/MS 10 0 1 1 84.076 84.255 2 4.4778E-08 97285 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.881 65.368 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5397 4093 4901 46585 36782 36782 1 AVCVEAGMIALR Oxidation (M) 1304.6581 0.65807712 1066 P17980 PSMC3 26S protease regulatory subunit 6A yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 65.284 65.519 2 0.0076159 75520 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 45.161 34.01 39452000 0 0 0 0 0 2100500 0 0 0 3447200 8441400 0 0 7180600 18283000 5398 1066 4902 46586;46587;46588;46589;46590 36783 36783 1501 1 AVDAGLNVMPYIK Oxidation (M) 1405.7275 0.72753689 1126 P21399 ACO1 Cytoplasmic aconitate hydratase yes yes 0 1 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 75.885 72.138 2 3.19E-12 89927 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.09 100.33 163040000 0 159880000 3163300 0 0 0 0 0 0 0 0 0 0 0 0 5399 1126 4903 46591;46592;46593 36784;36785;36786;36787;36788 36784 1618 5 AVDAGLNVMPYIK Unmodified 1389.7326 0.73262227 1126 P21399 ACO1 Cytoplasmic aconitate hydratase yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 85.159 81.664 2 2.7537E-08 101582 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.79 91.01 1125000000 0 1119400000 5590300 0 0 0 0 0 0 0 0 0 0 0 0 5400 1126 4903 46594;46595;46596 36789;36790;36791;36792 36790 4 AVDDGVNTFK Unmodified 1064.5138 0.51383895 1641 P50990 CCT8 T-complex protein 1 subunit theta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 35.394 35.763 2 0.0006507 38126 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 122.13 64.854 696760000 0 0 0 0 0 124880000 0 0 0 0 145920000 0 98799000 107130000 220030000 5401 1641 4904 46597;46598;46599;46600;46601 36793;36794;36795;36796;36797;36798 36794 4 AVDEDPENQTLRK Unmodified 1513.7372 0.73724996 3671 Q92845 KIFAP3 Kinesin-associated protein 3 yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By MS/MS 8.6 2.8 1 4 1 1 1 1 1 24.861 24.305 3 0.017738 29704 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 39.424 26.306 19346000 0 3985500 0 0 0 0 0 0 0 4146100 0 0 3580400 2259700 5374000 5402 3671 4905 46602;46603;46604;46605;46606 36799;36800 36800 2 AVDEMNGK Unmodified 862.38547 0.38546731 958 P11940;Q9H361 PABPC1;PABPC3 Polyadenylate-binding protein 1;Polyadenylate-binding protein 3 yes no 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 7.8003 7.9183 2 0.050242 5794 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 46.835 33.876 7050100 0 0 0 0 0 0 2334200 2131500 2584400 0 0 0 0 0 0 5403 958 4906 46607;46608;46609 36801 36801 1 AVDESVLLLRPDR Unmodified 1481.8202 0.82019173 36 A8K2U0 A2ML1 Alpha-2-macroglobulin-like protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 71.757 71.78 3 0.017731 82443 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 29.689 9.3075 61502000 0 0 0 19384000 3035700 3879300 3242000 6593800 0 6311700 5481100 7107000 3941600 2526000 0 5404 36 4907 46610;46611;46612;46613;46614;46615;46616;46617;46618;46619 36802;36803;36804 36803 3 AVDFAER Unmodified 806.39227 0.39226725 1930 P62917 RPL8 60S ribosomal protein L8 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.822 28.02 2 0.024591 29867 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 97.602 70.481 460870000 0 0 0 26361000 30572000 992170 27366000 32297000 23900000 48043000 46393000 63930000 57756000 49995000 53260000 5405 1930 4908 46620;46621;46622;46623;46624;46625;46626;46627;46628;46629;46630;46631 36805;36806;36807;36808;36809 36809 5 AVDGYVKPQIK Unmodified 1216.6816 0.68157298 1669;1450 P42229;P51692 STAT5A;STAT5B Signal transducer and activator of transcription 5A;Signal transducer and activator of transcription 5B no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 38.185 37.484 3 0.018832 42046 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 39.625 25.367 60754000 0 17021000 2876200 4635800 3040600 0 4551700 4286700 1470200 5666500 6627500 6044500 4533800 0 0 5406 1450;1669 4909 46632;46633;46634;46635;46636;46637;46638;46639;46640;46641;46642 36810;36811;36812 36812 3 AVDHATNRTQFGEK Unmodified 1572.7645 0.76446776 1591 P49748 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 17.762 14.27 3 0.0036866 21198 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.476 51.965 142120000 136690000 0 5433800 0 0 0 0 0 0 0 0 0 0 0 0 5407 1591 4910 46643;46644 36813;36814 36813 1 AVDIPHMDIEALK Unmodified 1450.749 0.74900062 1927 P62906 RPL10A 60S ribosomal protein L10a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 80.745 79.627 3 0.00040581 91669 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.212 52.162 786680000 40507000 317700000 31649000 7409000 12296000 23310000 8819300 24090000 21099000 30945000 31499000 45290000 31000000 44901000 116160000 5408 1927 4911 46645;46646;46647;46648;46649;46650;46651;46652;46653;46654;46655;46656;46657;46658;46659;46660 36815;36816;36817;36818;36819;36820;36821;36822;36823;36824;36825;36826;36827;36828;36829;36830;36831 36819 17 AVDIPHMDIEALK Oxidation (M) 1466.7439 0.74391524 1927 P62906 RPL10A 60S ribosomal protein L10a yes yes 0 1 0 By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching 8.22 3.33 2 7 1 1 1 1 1 1 2 1 64.727 64.422 2;3 0.00094083 80238 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 70.622 54.484 152990000 0 79941 36681000 21086000 0 0 0 0 0 10205000 9858700 0 8621700 51846000 14613000 5409 1927 4911 46661;46662;46663;46664;46665;46666;46667;46668;46669 36832;36833;36834;36835 36832 3104 2 AVDITTPK Unmodified 843.47018 0.47018322 505 O75475 PSIP1 PC4 and SFRS1-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31.889 31.074 2 0.025168 34128 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 58.917 22.732 923970000 32867000 300590000 4564300 35596000 34176000 38688000 48664000 31172000 39682000 53356000 65725000 77511000 47375000 40111000 73888000 5410 505 4912 46670;46671;46672;46673;46674;46675;46676;46677;46678;46679;46680;46681;46682;46683;46684 36836;36837;36838;36839 36836 4 AVDLGPPK Unmodified 795.44905 0.44905385 4003 Q96TA1 FAM129B Niban-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 34.924 34.316 2 0.016731 38431 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.799 31.306 148170000 0 81488000 0 3165200 0 14679000 4134500 2751700 4252000 6727500 7018700 7132700 0 5106500 11713000 5411 4003 4913 46685;46686;46687;46688;46689;46690;46691;46692;46693;46694;46695;46696 36840;36841;36842;36843;36844;36845;36846 36841 7 AVDLGPPKPSDQETGEQVSSPSSHPALHTTTEDSAGVQTEF Unmodified 4232.9622 0.96218369 4003 Q96TA1 FAM129B Niban-like protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 6 4 3 3 1 1 1 1 1 1 74.224 71.715 4 7.4048E-98 90244 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.27 104.46 284210000 62010000 97812000 99309000 0 0 0 0 0 0 6990200 4765200 0 0 0 13329000 5412 4003 4914 46697;46698;46699;46700;46701;46702 36847;36848;36849;36850;36851 36848 5 AVDLIQK Unmodified 785.4647 0.46470391 1405 P39748;CON__ENSEMBL:ENSBTAP00000007350;CON__P01030 FEN1 Flap endonuclease 1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 33.728 34.032 2 0.023354 37746 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 89.673 7.4108 71294000 0 0 0 0 0 9612100 6937700 3551500 3057400 9492100 10435000 12781000 0 6138300 9288500 5413 1405 4915 46703;46704;46705;46706;46707;46708;46709;46710;46711 36852;36853;36854;36855;36856;36857;36858 36853 7 AVDLVEEESGAPGEEQR Unmodified 1813.833 0.83300084 384 O60231 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 50.455 50.881 2 3.0233E-36 57629 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 127.17 93.945 16846000 0 0 0 0 0 0 0 0 0 0 16846000 0 0 0 0 5414 384 4916 46712;46713;46714;46715 36859;36860;36861;36862 36859 3 AVDLVEEESGAPGEEQRR Unmodified 1969.9341 0.93411186 384 O60231 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 44.67 44.904 3 6.7412E-43 49257 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 147.24 131.6 92839000 0 0 0 12271000 0 21564000 0 0 0 17529000 0 14518000 0 11880000 15077000 5415 384 4917 46716;46717;46718;46719;46720;46721;46722;46723;46724 36863;36864;36865;36866;36867;36868;36869;36870;36871;36872;36873 36867 11 AVDNILR Unmodified 799.4552 0.45520186 2793 Q5TBA9 FRY Protein furry homolog yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 46.901 47.641 2 0.03857 52298 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.432 20.121 42206000 0 0 0 0 0 0 0 0 0 0 0 17856000 0 0 24350000 5416 2793 4918 46725;46726 36874;36875 36874 2 AVDNQVYVATASPARDDK Unmodified 1918.9385 0.93846896 4573 Q9NQR4 NIT2 Omega-amidase NIT2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 40.763 41.323 3 0.0055171 45528 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 33.071 23.655 76082000 0 0 0 0 0 0 0 0 0 0 17492000 16010000 0 9231000 33349000 5417 4573 4919 46727;46728;46729;46730 36876;36877;36878 36878 3 AVDPEDDFQR Unmodified 1190.5204 0.52038089 4066 Q99848 EBNA1BP2 Probable rRNA-processing protein EBP2 yes yes 0 0 0 By matching By matching By MS/MS By matching By matching 10 0 5 1 1 1 1 1 39.615 40.009 2 0.01988 44527 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 56.258 39.482 28346000 0 0 0 0 0 0 0 0 3479700 0 5557000 0 7234600 4237400 7837400 5418 4066 4920 46731;46732;46733;46734;46735 36879 36879 1 AVDPRHPNMMTDVVK Unmodified 1708.8389 0.83889503 4630 Q9NSV4 DIAPH3 Protein diaphanous homolog 3 yes yes 0 0 1 By MS/MS 2 0 2 2 60.24 51.999 3;4 0.0028982 70645 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 59.673 52.471 49882000 49882000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5419 4630 4921 46736;46737 36880;36881 36881 1 AVDQHNAEAQDIFGK Unmodified 1641.7747 0.7746981 1695 P52732 KIF11 Kinesin-like protein KIF11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 4 1 1 1 1 1 1 1 1 1 1 1 1 1 47.445 46.079 2;3 2.1542E-10 57121 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 103.79 85.689 464650000 0 196060000 3090800 11746000 10762000 24765000 18082000 19889000 13202000 20975000 20705000 37985000 33221000 20885000 33288000 5420 1695 4922 46738;46739;46740;46741;46742;46743;46744;46745;46746;46747;46748;46749;46750;46751;46752;46753;46754 36882;36883;36884;36885;36886;36887;36888;36889;36890;36891;36892;36893;36894;36895;36896;36897;36898 36891 16 AVDQLQEK Unmodified 929.48181 0.48181054 3156 Q86UU1 PHLDB1 Pleckstrin homology-like domain family B member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 15.591 15.614 2 0.015495 15148 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 68.787 39.637 19611000 0 0 0 2023200 2317900 2540800 3535300 0 2427700 2668800 0 0 4096900 0 0 5421 3156 4923 46755;46756;46757;46758;46759;46760;46761;46762;46763 36899;36900;36901;36902 36899 4 AVDQPRQLFWEK Unmodified 1515.7834 0.78341229 707 O95983 MBD3 Methyl-CpG-binding domain protein 3 yes yes 0 0 1 By MS/MS 2 0 1 1 74.354 66.224 3 0.00033219 87541 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.522 64.604 30579000 30579000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5422 707 4924 46764 36903 36903 1 AVDQVCTFLFK Unmodified 1326.6642 0.66420836 293 O15541 RNF113A RING finger protein 113A yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 82.738 82.291 2 0.00029633 95284 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 90.15 73.374 59389000 0 26092000 0 1138600 934160 2701100 1724000 0 2438300 0 6268100 6056100 3619500 0 8416700 5423 293 4925 46765;46766;46767;46768;46769;46770;46771;46772;46773;46774 36904;36905;36906;36907;36908;36909;36910 36908 6 AVDSAMELLFLDTFK Acetyl (Protein N-term) 1740.8644 0.86442431 2863 Q69YN4 KIAA1429 Protein virilizer homolog yes yes 1 0 0 By MS/MS 2 0 1 1 106.17 101.42 2 0.00015285 125135 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.55 87.126 4784000 0 4784000 0 0 0 0 0 0 0 0 0 0 0 0 0 5424 2863 4926 46775 36911 36911 1 AVDSLVPIGR Unmodified 1025.5869 0.58694431 1192 P25705 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.263 65.351 2 0.0014782 75282 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 106.04 76.893 289050000 0 0 0 24504000 15838000 16890000 23744000 24939000 17866000 23805000 28707000 38280000 23327000 21953000 29202000 5425 1192 4927 46776;46777;46778;46779;46780;46781;46782;46783;46784;46785;46786;46787 36912;36913;36914;36915;36916;36917;36918;36919;36920;36921;36922;36923 36923 9 AVDSQILPK Unmodified 969.5495 0.54949617 2083 Q02878 RPL6 60S ribosomal protein L6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45.039 44.012 2 0.007722 57208 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.02 49.051 1607900000 13395000 214300000 2643400 71835000 85332000 71848000 71453000 77939000 57072000 109260000 131580000 174560000 169310000 151420000 205920000 5426 2083 4928 46788;46789;46790;46791;46792;46793;46794;46795;46796;46797;46798;46799;46800;46801;46802 36924;36925;36926;36927;36928;36929;36930;36931 36926 8 AVDSSSMREDLFK Unmodified 1483.6977 0.69769333 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 3 24 1 1 1 2 2 2 2 2 2 2 2 2 2 2 2 56.831 56.278 2;3 2.6425E-11 62824 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 131.12 112.85 1864900000 12174000 77414000 28405000 79387000 105420000 92758000 106490000 163930000 101520000 136120000 147910000 253170000 138060000 200370000 221810000 5427 213 4929 46803;46804;46805;46806;46807;46808;46809;46810;46811;46812;46813;46814;46815;46816;46817;46818;46819;46820;46821;46822;46823;46824;46825;46826;46827;46828;46829 36932;36933;36934;36935;36936;36937;36938;36939;36940;36941;36942;36943;36944;36945;36946;36947;36948;36949;36950;36951;36952 36938 19 AVDSSSMREDLFK Oxidation (M) 1499.6926 0.69260795 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching 10 0 18 1 1 1 2 3 1 2 1 1 2 2 1 38.772 38.957 2;3 1.5084E-11 42708 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 127.78 101.26 546590000 0 0 0 19512000 23780000 30658000 64801000 49584000 21494000 71598000 41857000 64407000 79111000 51719000 28073000 5428 213 4929 46830;46831;46832;46833;46834;46835;46836;46837;46838;46839;46840;46841;46842;46843;46844;46845;46846;46847 36953;36954;36955;36956;36957;36958;36959 36959 282 7 AVDTLAYLSDGDAR Unmodified 1465.7049 0.7048872 3983 Q96S55 WRNIP1 ATPase WRNIP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 70.747 70.611 2 6.8923E-19 81408 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 128.01 105.93 24425000 0 0 0 2662100 3046100 0 0 5117000 0 7355000 0 0 6244400 0 0 5429 3983 4930 46848;46849;46850;46851;46852;46853;46854;46855 36960;36961;36962;36963;36964;36965;36966;36967;36968 36965 9 AVDTWSWGER Unmodified 1205.5465 0.54653606 2157 Q08380 LGALS3BP Galectin-3-binding protein yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 64.633 64.797 2 0.010295 73881 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 56.258 51.567 42548000 0 0 0 2981700 0 0 2944600 2928900 1975900 0 6312100 6230600 5278900 5933500 7961400 5430 2157 4931 46856;46857;46858;46859;46860;46861;46862;46863;46864 36969;36970;36971;36972 36970 4 AVDVFFPPEAQNDFPVAMQISEK Oxidation (M) 2594.2363 0.23629047 2040 Q00610 CLTC Clathrin heavy chain 1 yes yes 0 1 0 By MS/MS 2 0 2 2 93.654 91.24 3 1.0298E-13 112984 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.48 76.723 243220000 0 243220000 0 0 0 0 0 0 0 0 0 0 0 0 0 5431 2040 4932 46865;46866 36973 36973 3298 1 AVDVFFPPEAQNDFPVAMQISEK Unmodified 2578.2414 0.24137584 2040 Q00610 CLTC Clathrin heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS 2.4 0.49 3 2 4 1 97.399 93.683 2;3 1.7601E-45 115324 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 155.2 143.05 754500000 0 741920000 12582000 0 0 0 0 0 0 0 0 0 0 0 0 5432 2040 4932 46867;46868;46869;46870;46871 36974;36975;36976;36977;36978;36979;36980 36976 7 AVEAAQLAEDLK Unmodified 1256.6612 0.66123147 463 O75150 RNF40 E3 ubiquitin-protein ligase BRE1B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 69.926 68.716 2 4.1532E-12 79076 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 137.98 104.71 1120300000 9769300 613690000 6091600 20092000 24949000 30689000 46623000 33815000 24461000 50010000 50169000 49638000 51886000 38002000 70425000 5433 463 4933 46872;46873;46874;46875;46876;46877;46878;46879;46880;46881;46882;46883;46884;46885;46886;46887 36981;36982;36983;36984;36985;36986;36987;36988;36989;36990;36991;36992;36993;36994;36995;36996;36997;36998;36999;37000;37001 37001 20 AVEALQGEK Unmodified 943.49746 0.4974606 413 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 19.922 20.034 2 0.010372 20080 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.42 14.831 42656000 0 0 0 5078200 5124800 0 7573700 0 5881600 0 0 10056000 0 8942200 0 5434 413 4934 46888;46889;46890;46891;46892;46893;46894;46895 37002;37003;37004;37005;37006 37006 5 AVEARSPGLQK Unmodified 1154.6408 0.6407708 2667 Q3KQU3 MAP7D1 MAP7 domain-containing protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 22.441 17.545 2 0.017525 25233 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.054 48.759 9960300 9960300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5435 2667 4935 46896 37007 37007 1 AVEAVVNDTSGENK Unmodified 1431.6842 0.68415175 4815 Q9P2D3 HEATR5B HEAT repeat-containing protein 5B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 27.907 28.153 2 3.8109E-08 29975 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 96.229 38.64 48060000 0 0 0 0 2465700 4759000 3629100 0 3277900 3362100 6044500 8005600 4755400 6759200 5001400 5436 4815 4936 46897;46898;46899;46900;46901;46902;46903;46904;46905;46906 37008;37009;37010;37011;37012;37013;37014;37015;37016 37015 9 AVECPPPR Unmodified 924.44874 0.44873627 2485 Q15046 KARS Lysine--tRNA ligase yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 13.959 14.246 2 0.0095943 12731 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 82.386 45.357 24209000 0 0 0 0 0 2361600 0 0 0 0 4761200 0 0 6581800 10505000 5437 2485 4937 46907;46908;46909;46910 37017;37018;37019;37020;37021 37020 5 AVECPPPRTTAR Unmodified 1353.6823 0.68231804 2485 Q15046 KARS Lysine--tRNA ligase yes yes 0 0 1 By MS/MS By matching By MS/MS 2 0 3 1 1 1 18.817 15.299 3 0.002065 21551 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.695 60.323 54761000 41341000 2600600 10819000 0 0 0 0 0 0 0 0 0 0 0 0 5438 2485 4938 46911;46912;46913 37022;37023;37024;37025 37023 3 AVECVESTGR Unmodified 1106.5026 0.50262234 5233 Q9Y5J5 PHLDA3 Pleckstrin homology-like domain family A member 3 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 15.764 15.903 2 0.013776 15946 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.066 31.28 112940000 0 0 0 26237000 5152200 8027500 5565000 9275600 4954900 7696400 0 14754000 15560000 7217300 8499600 5439 5233 4939 46914;46915;46916;46917;46918;46919;46920;46921;46922;46923;46924 37026;37027;37028 37026 3 AVEDAFVPVIK Unmodified 1186.6598 0.6597749 4213 Q9BWT3 PAPOLG Poly(A) polymerase gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 77.981 78.056 2 0.018629 90041 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 43.442 19.412 39887000 0 0 0 0 4601400 6295100 4444800 0 4841300 0 6084100 7159200 0 6461000 0 5440 4213 4940 46925;46926;46927;46928;46929;46930;46931 37029;37030;37031 37029 3 AVEDDFVEMRK Unmodified 1337.6286 0.62855113 4143 Q9BTE3 MCMBP Mini-chromosome maintenance complex-binding protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.42 3.66 3 1 8 1 2 1 1 1 1 1 1 1 1 1 51.845 50.057 3 0.00043961 62114 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 77.64 63.079 291490000 25030000 139480000 24481000 5492800 0 17603000 7460100 4676200 0 0 14052000 0 10130000 8830800 34247000 5441 4143 4941 46932;46933;46934;46935;46936;46937;46938;46939;46940;46941;46942;46943 37032;37033;37034;37035;37036;37037;37038;37039 37034 6 AVEDDFVEMRK Oxidation (M) 1353.6235 0.62346575 4143 Q9BTE3 MCMBP Mini-chromosome maintenance complex-binding protein yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 40.774 36.452 3 0.0041256 47585 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.132 42.745 72905000 0 42874000 30031000 0 0 0 0 0 0 0 0 0 0 0 0 5442 4143 4941 46944;46945 37040 37040 5638 1 AVEDDVFIPLYPK Unmodified 1504.7813 0.7813466 1036 P16383 GCFC2 GC-rich sequence DNA-binding factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.64 2.9 1 1 9 2 1 1 1 1 1 1 1 1 1 87.655 87.026 2 0.00024615 100637 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.749 65.724 114380000 0 85521000 0 0 0 3565100 2180400 2300700 0 3961500 2942300 4272300 2007600 1945900 5685600 5443 1036 4942 46946;46947;46948;46949;46950;46951;46952;46953;46954;46955;46956 37041;37042;37043;37044;37045;37046;37047;37048;37049;37050 37045 9 AVEDEATK Unmodified 861.40798 0.40797689 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 6.8183 3.4807 2 0.01951 6704 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.794 42.102 90832000 47037000 43795000 0 0 0 0 0 0 0 0 0 0 0 0 0 5444 5187 4943 46957;46958 37051;37052 37052 2 AVEDEGLRVFQSVK Acetyl (Protein N-term) 1617.8362 0.83623572 2420 Q14644 RASA3 Ras GTPase-activating protein 3 yes yes 1 0 1 By MS/MS 3 0 1 1 86.754 83.539 2 2.5769E-14 100004 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 107.97 76.68 11019000 0 11019000 0 0 0 0 0 0 0 0 0 0 0 0 0 5445 2420 4944 46959 37053;37054 37053 2 AVEDIHGLFSLSK Unmodified 1414.7456 0.7456298 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.11 3.8 6 1 12 2 3 2 1 1 1 1 1 1 1 1 1 1 1 1 79.617 77.86 2;3 1.0633E-09 99420 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 136.5 103.31 616870000 242840000 200190000 46749000 3459500 2427000 14210000 5020800 10173000 8096200 14075000 8789800 15243000 10833000 9899100 24867000 5446 2378 4945 46960;46961;46962;46963;46964;46965;46966;46967;46968;46969;46970;46971;46972;46973;46974;46975;46976;46977;46978 37055;37056;37057;37058;37059;37060;37061;37062;37063;37064;37065;37066;37067;37068;37069;37070 37061 14 AVEDINEHITDAQLEAMTELHDRTAVIK Unmodified 3161.5663 0.56629181 4365 Q9H2G2 SLK STE20-like serine/threonine-protein kinase yes yes 0 0 1 By MS/MS 2 0 2 2 89.315 81.184 4;5 7.6864E-08 105537 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.688 54.446 48097000 48097000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5447 4365 4946 46979;46980 37071;37072 37072 2 AVEEAERLSESLK Unmodified 1459.7518 0.75183739 1420 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 57.338 51.641 3 0.010231 69802 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.013 32.94 130420000 8421700 85843000 36158000 0 0 0 0 0 0 0 0 0 0 0 0 5448 1420 4947 46981;46982;46983;46984 37073;37074;37075;37076;37077 37076 3 AVEEAFVPVIK Unmodified 1200.6754 0.67542497 1644 P51003;Q9NRJ5 PAPOLA;PAPOLB Poly(A) polymerase alpha;Poly(A) polymerase beta yes no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.082 77.143 2 0.00054978 88958 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 81.594 51.024 84043000 0 0 0 4016700 3630200 9732500 6043100 4097400 3930100 9018600 7363200 8379300 5080800 7246000 15505000 5449 1644 4948 46985;46986;46987;46988;46989;46990;46991;46992;46993;46994;46995;46996 37078;37079;37080;37081;37082;37083;37084;37085;37086;37087;37088;37089 37085 11 AVEEEQNGALYEAIK Unmodified 1662.8101 0.81008055 4957 Q9UK97 FBXO9 F-box only protein 9 yes yes 0 0 0 By MS/MS 2 0 1 1 66.869 60.953 2 6.4972E-07 77877 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.28 116.42 35892000 0 35892000 0 0 0 0 0 0 0 0 0 0 0 0 0 5450 4957 4949 46997 37090 37090 1 AVEELHK Unmodified 824.43922 0.43921744 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 8.29 8.4208 2 0.02333 6868 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 90.986 25.723 108650000 0 0 0 7140900 5563300 6090000 7424000 6147200 7408000 6792100 20255000 10170000 9779700 7845900 14034000 5451 965 4950 46998;46999;47000;47001;47002;47003;47004;47005;47006;47007;47008;47009 37091;37092;37093;37094;37095 37095 5 AVEELQSIIK Acetyl (Protein N-term) 1170.6496 0.64960415 3696 Q92990 GLMN Glomulin yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.24 3.77 1 3 2 11 3 2 1 1 1 1 1 1 1 1 1 1 1 1 94.908 93.956 2 0.00011758 113530 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 137.14 105.37 801180000 79753000 656750000 738890 1027600 3470000 6995200 0 3163500 3175900 9321500 7182500 6905500 3526200 6685000 12477000 5452 3696 4951 47010;47011;47012;47013;47014;47015;47016;47017;47018;47019;47020;47021;47022;47023;47024;47025;47026 37096;37097;37098;37099;37100;37101;37102;37103;37104;37105;37106;37107;37108;37109;37110;37111 37098 16 AVEENGEEAEPVR Unmodified 1427.6529 0.65285163 329 O43432 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 23.879 24.043 2 0.00039956 24364 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 97.456 90.797 19299000 0 0 0 0 1343800 1917200 2388800 2089700 1644600 1516700 0 0 2233500 2601700 3563300 5453 329 4952 47027;47028;47029;47030;47031;47032;47033;47034;47035;47036;47037 37112;37113;37114;37115;37116;37117;37118;37119;37120;37121 37115 10 AVEEQIEYLQK Unmodified 1348.6874 0.68744622 2816 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 56.542 56.611 2 0.0025714 65238 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 82.645 63.551 108520000 0 0 0 8900700 10143000 9298700 10199000 0 7883400 10497000 12855000 12964000 17075000 8700300 0 5454 2816 4953 47038;47039;47040;47041;47042;47043;47044;47045;47046;47047 37122;37123;37124;37125;37126;37127 37126 6 AVEHINK Unmodified 809.43955 0.43955179 827 P06733 ENO1 Alpha-enolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching 6.36 4.01 1 3 1 6 2 2 1 1 1 1 1 1 1 15.576 15.001 2 0.021122 5452 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.63 31.18 38516000000 5269400000 18939000000 14284000000 0 0 743530 410460 0 533080 0 9882600 11955000 551090 0 0 5455 827 4954 47048;47049;47050;47051;47052;47053;47054;47055;47056;47057;47058 37128;37129;37130;37131;37132;37133;37134 37128 7 AVEHLDDLPGALSELSDLHAHK Unmodified 2366.1866 0.18663816 55 CON__P01966 yes yes 0 0 0 By MS/MS 2 0 1 1 90.048 81.918 4 0.00072772 106465 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.223 44.959 + 8420300 8420300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5456 55 4955 47059 37135;37136 37136 2 AVEHMFETEDGSK Unmodified 1478.6348 0.63475872 5264 Q9Y657 SPIN1 Spindlin-1 yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 39.554 35.284 3 0.00063496 46201 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.798 59.519 22134000 0 18974000 3159600 0 0 0 0 0 0 0 0 0 0 0 0 5457 5264 4956 47060;47061 37137 37137 1 AVEHNIQIGK Unmodified 1107.6037 0.60365701 3953 Q96Q15 SMG1 Serine/threonine-protein kinase SMG1 yes yes 0 0 0 By MS/MS 2 0 1 1 31.042 25.323 2 0.031848 35562 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.246 23.994 9947100 9947100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5458 3953 4957 47062 37138 37138 1 AVEHPSVPESPEFVR Unmodified 1678.8315 0.83148469 4583 Q9NQZ5 STARD7 StAR-related lipid transfer protein 7, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.173 59.282 3 6.3617E-06 67550 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 80.746 69.273 107770000 0 0 0 6716200 4541100 11299000 9143200 8166700 6672000 10446000 11893000 10587000 7178000 9265600 11862000 5459 4583 4958 47063;47064;47065;47066;47067;47068;47069;47070;47071;47072;47073;47074 37139;37140;37141;37142;37143;37144;37145;37146;37147;37148;37149;37150;37151 37141 13 AVEIEELTYIIK Unmodified 1419.7861 0.78609763 2251 Q13190 STX5 Syntaxin-5 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 95.597 87.467 2 0.0018297 113079 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 102.06 77.286 5545300 5545300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5460 2251 4959 47075;47076 37152;37153;37154 37154 3 AVEIVTSTSAAK Unmodified 1175.6398 0.63976774 2456 Q14966 ZNF638 Zinc finger protein 638 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.026 37.205 2 0.005125 39732 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.595 45.649 95294000 0 0 0 5030700 5313500 4716100 6422900 6049100 4450200 8534800 7597600 14254000 10883000 8366500 13676000 5461 2456 4960 47077;47078;47079;47080;47081;47082;47083;47084;47085;47086;47087;47088 37155;37156;37157;37158;37159;37160;37161;37162;37163;37164;37165 37158 8 AVELAANTK Unmodified 915.50255 0.50254598 1249 P29401 TKT Transketolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.26 3.91 9 2 12 3 5 3 1 1 1 1 1 1 1 1 1 1 1 1 23.29 21.993 2 0.00010599 23157 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 150.4 82.418 10296000000 491070000 8090700000 82348000 28143000 12439000 15671000 17726000 24766000 12439000 27386000 341120000 280450000 29539000 227660000 614540000 5462 1249 4961 47089;47090;47091;47092;47093;47094;47095;47096;47097;47098;47099;47100;47101;47102;47103;47104;47105;47106;47107;47108;47109;47110;47111 37166;37167;37168;37169;37170;37171;37172;37173;37174;37175;37176;37177;37178;37179;37180;37181;37182;37183;37184;37185;37186;37187;37188;37189;37190 37183 24 AVELASLQNAK Unmodified 1142.6295 0.62953741 2958 Q6PJG2 ELMSAN1 ELM2 and SANT domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 50.512 50.899 2 0.042589 56496 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.368 22.297 28942000 0 0 0 0 0 0 14080000 0 0 0 0 0 0 0 14862000 5463 2958 4962 47112;47113 37191 37191 1 AVELDLVPGR Unmodified 1067.5975 0.597509 2034 Q00403 GTF2B Transcription initiation factor IIB yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.969 72.037 2 0.0014814 82766 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 92.439 67.517 127560000 0 0 0 6539500 9275300 14223000 9013300 8068800 6820800 11049000 14731000 12121000 9403700 7756100 18560000 5464 2034 4963 47114;47115;47116;47117;47118;47119;47120;47121;47122;47123;47124;47125 37192;37193;37194;37195;37196;37197;37198;37199;37200;37201;37202;37203 37197 11 AVELEGLAACEGEYSQK Unmodified 1852.8513 0.85129344 3967 Q96RG2 PASK PAS domain-containing serine/threonine-protein kinase yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 74.15 69.599 2 5.0177E-47 87404 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 169.62 149.86 38084000 0 38084000 0 0 0 0 0 0 0 0 0 0 0 0 0 5465 3967 4964 47126;47127 37204;37205 37204 2 AVELEHETFR Unmodified 1229.6041 0.60405094 581 O94762 RECQL5 ATP-dependent DNA helicase Q5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 41.246 41.379 3 0.021726 44925 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.89 18.689 73945000 0 0 0 4702300 5178400 7820700 0 6446400 7648700 10022000 8528500 0 10200000 4904200 8494600 5466 581 4965 47128;47129;47130;47131;47132;47133;47134;47135;47136;47137 37206 37206 1 AVELGDELQIDAIDDQK Unmodified 1870.916 0.91600218 3897 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 2 2 2 2 84.208 79.261 2 3.7062E-95 99340 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 204.13 178.66 96469000 10932000 85537000 0 0 0 0 0 0 0 0 0 0 0 0 0 5467 3897 4966 47138;47139;47140;47141 37207;37208;37209 37207 2 AVELLPDGTANLAK Unmodified 1410.7718 0.77184455 434 O60826 CCDC22 Coiled-coil domain-containing protein 22 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 74.491 74.545 2 0.00036635 85907 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 80.102 58.638 86532000 0 0 0 5251300 5749000 8748100 4437600 6640900 0 8338500 9445700 13114000 9713700 4944800 10149000 5468 434 4967 47142;47143;47144;47145;47146;47147;47148;47149;47150;47151;47152 37210;37211;37212;37213;37214;37215;37216;37217 37211 8 AVELLVELASLQTSFVTLDEAIK Unmodified 2488.3676 0.36762221 5237 Q9Y5K8 ATP6V1D V-type proton ATPase subunit D yes yes 0 0 0 By MS/MS 2 0 1 1 105.69 97.555 3 0.0065179 125226 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 27.563 24.101 1697400 1697400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5469 5237 4968 47153 37218 37218 1 AVELPEK Unmodified 784.43307 0.43306943 2295 Q13459 MYO9B Unconventional myosin-IXb yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 30.055 30.085 2 0.028147 32911 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 76.847 26.727 15050000 0 0 0 0 2389600 0 3399000 2969600 0 0 0 0 0 6292000 0 5470 2295 4969 47154;47155;47156;47157 37219 37219 1 AVEMAAQR Unmodified 874.43309 0.43308621 23 A6NDG6 PGP Phosphoglycolate phosphatase yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 14.603 15.098 2 0.013714 13692 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.715 28.649 36962000 0 0 0 0 0 0 0 0 0 0 14615000 0 0 0 22347000 5471 23 4970 47158;47159 37220;37221 37220 2 AVEMTDQLMVPTLGSQEGAFENVR 2 Oxidation (M) 2653.2364 0.23636682 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 82.865 82.925 3 3.4168E-11 96031 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 64.68 60.265 11945000 0 0 0 0 0 2901800 0 0 0 9042900 0 0 0 0 0 5472 2775 4971 47160;47161;47162 37222;37223;37224 37223 4405;4406 3 AVENGSEALMILDDQTNK Oxidation (M) 1962.9204 0.92043564 2021 P98082 DAB2 Disabled homolog 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.79 1.18 1 33 1 3 2 3 4 2 4 2 3 2 4 1 3 76.935 76.882 2;3 4.7604E-48 88991 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 157.38 134.01 366610000 0 9748200 0 12271000 13532000 25202000 44334000 14797000 40035000 35477000 48556000 20400000 36522000 15397000 50337000 5473 2021 4972 47163;47164;47165;47166;47167;47168;47169;47170;47171;47172;47173;47174;47175;47176;47177;47178;47179;47180;47181;47182;47183;47184;47185;47186;47187;47188;47189;47190;47191;47192;47193;47194;47195;47196 37225;37226;37227;37228;37229;37230;37231;37232;37233;37234;37235;37236;37237;37238;37239;37240;37241;37242;37243;37244 37239 3275 14 AVENGSEALMILDDQTNK Unmodified 1946.9255 0.92552101 2021 P98082 DAB2 Disabled homolog 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.56 1.83 1 17 1 1 2 1 2 1 1 2 2 2 1 1 1 79.919 79.715 2;3 3.831E-128 91397 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 202.13 188.72 423440000 0 232910000 0 3111100 9213200 8111800 8873300 9718900 8599200 28830000 20364000 24672000 11938000 12260000 44835000 5474 2021 4972 47197;47198;47199;47200;47201;47202;47203;47204;47205;47206;47207;47208;47209;47210;47211;47212;47213;47214 37245;37246;37247;37248;37249;37250;37251;37252;37253;37254;37255;37256;37257 37254 12 AVENINNTLGPALLQK Unmodified 1693.9363 0.93628412 991 P13929 ENO3 Beta-enolase yes yes 0 0 0 By MS/MS By MS/MS 4 3.03 2 2 1 4 1 80.991 77.842 2;3 4.1915E-45 96493 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 155.02 128.9 330670000 0 320140000 0 0 0 0 0 0 0 0 0 0 0 0 10526000 5475 991 4973 47215;47216;47217;47218;47219 37258;37259;37260;37261;37262 37259 5 AVENPTATEIQDVCSAVGLNVFLEK Unmodified 2703.3425 0.34254645 878 P09132 SRP19 Signal recognition particle 19 kDa protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 2 1 1 1 1 97.639 93.002 3 1.7872E-25 114674 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 97.124 90.331 50615000 21256000 18204000 11155000 0 0 0 0 0 0 0 0 0 0 0 0 5476 878 4974 47220;47221;47222 37263;37264;37265 37265 3 AVENSSTAIGIR Unmodified 1216.6412 0.64116473 1195 P25788 PSMA3 Proteasome subunit alpha type-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 39.854 39.093 2 3.9949E-23 47768 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 166.33 133.48 1398700000 0 829310000 7919600 48456000 11425000 14012000 12857000 20610000 9968200 15571000 80461000 79476000 19220000 53720000 195700000 5477 1195 4975 47223;47224;47225;47226;47227;47228;47229;47230;47231;47232;47233;47234;47235;47236;47237 37266;37267;37268;37269;37270;37271;37272;37273;37274;37275;37276;37277;37278;37279;37280;37281;37282;37283;37284 37274 16 AVENSSTAIGIRCK Unmodified 1504.7668 0.76677595 1195 P25788 PSMA3 Proteasome subunit alpha type-3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 2 2 2 37.051 32.168 2;3 7.5194E-66 44643 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 202.16 176.22 740370000 644030000 43595000 52745000 0 0 0 0 0 0 0 0 0 0 0 0 5478 1195 4976 47238;47239;47240;47241;47242;47243 37285;37286;37287;37288;37289 37287 5 AVENYLIQMAR Oxidation (M) 1322.6653 0.66527099 207 O14737 PDCD5 Programmed cell death protein 5 yes yes 0 1 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 2 2 1 1 2 61.435 61.698 2 5.9747E-05 70583 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 111.06 87.989 135200000 0 0 0 0 1999300 0 3674400 2613300 0 5486400 26770000 35007000 8063100 8678100 42911000 5479 207 4977 47244;47245;47246;47247;47248;47249;47250;47251;47252;47253;47254;47255;47256 37290;37291;37292;37293;37294;37295;37296;37297;37298 37295 276 9 AVENYLIQMAR Unmodified 1306.6704 0.67035637 207 O14737 PDCD5 Programmed cell death protein 5 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 78.269 78.453 2 0.0087897 89852 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 80.239 70.007 182780000 0 0 0 0 0 0 0 9396600 0 0 18356000 30599000 0 22806000 101620000 5480 207 4977 47257;47258;47259;47260;47261 37299;37300;37301;37302 37301 1 AVEQGGAFSNPETLDLYRDIPELQGF Unmodified 2865.3821 0.38210308 3159 Q86V21 AACS Acetoacetyl-CoA synthetase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 98.619 93.512 2;3 2.4639E-65 116802 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 182.49 176.07 30408000 11510000 13798000 5101200 0 0 0 0 0 0 0 0 0 0 0 0 5481 3159 4978 47262;47263;47264 37303;37304;37305 37303 3 AVEQHNGK Unmodified 881.43553 0.43552905 4106 Q9BRA2 TXNDC17 Thioredoxin domain-containing protein 17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.57 3.96 3 4 1 1 1 1 1 1 1 15.931 14.975 2 0.022985 14475 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 60.709 6.6525 127320000 0 43111000 61229000 4428600 0 7317900 4129100 0 0 0 0 7103900 0 0 0 5482 4106 4979 47265;47266;47267;47268;47269;47270;47271 37306;37307;37308;37309;37310;37311;37312;37313 37306 8 AVEQRDFIGVDSTGK Unmodified 1620.8107 0.81074925 4593 Q9NR50 EIF2B3 Translation initiation factor eIF-2B subunit gamma yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 1 3 1 51.756 46.247 2;3 0.0013018 61043 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 48.216 38.636 114860000 10539000 88792000 15532000 0 0 0 0 0 0 0 0 0 0 0 0 5483 4593 4980 47272;47273;47274;47275;47276 37314;37315;37316;37317;37318 37314 3 AVESCPDEEEGPFSLPEEERK Unmodified 2433.0642 0.064199339 3012 Q6ZSZ5 ARHGEF18 Rho guanine nucleotide exchange factor 18 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 65.57 65.761 3 9.4693E-29 74675 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 101.64 100.37 49364000 0 0 0 0 4335600 0 0 0 0 0 7708000 8379400 7836400 7179600 13925000 5484 3012 4981 47277;47278;47279;47280;47281;47282;47283 37319;37320;37321;37322;37323;37324;37325;37326 37320 8 AVESGVPQPPDPPVQRDEEEEK Unmodified 2431.1503 0.15031223 4810 Q9P287 BCCIP BRCA2 and CDKN1A-interacting protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 2 1 1 1 1 1 1 1 52.783 52.874 3 0.00010256 60094 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 44.089 37.513 130970000 0 0 0 6972900 5454900 15108000 12018000 9333700 7730500 13990000 20548000 0 5549500 13033000 21234000 5485 4810 4982 47284;47285;47286;47287;47288;47289;47290;47291;47292;47293;47294;47295 37327;37328;37329;37330;37331;37332;37333;37334;37335;37336 37329 10 AVESIQAEDESAK Unmodified 1375.6467 0.64670362 3055 Q7L5Y9 MAEA Macrophage erythroblast attacher yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 27.614 26.449 2 2.4301E-11 28902 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 140.07 105.27 51032000 5171400 3910000 0 0 6264800 0 5370200 0 5140400 5990700 9598000 0 9586500 0 0 5486 3055 4983 47296;47297;47298;47299;47300;47301;47302;47303;47304;47305;47306;47307 37337;37338;37339;37340;37341;37342;37343;37344;37345;37346;37347;37348;37349 37339 12 AVESLAEAGGSEIQRVK Unmodified 1742.9163 0.91627696 3992 Q96SN8 CDK5RAP2 CDK5 regulatory subunit-associated protein 2 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 63.218 58.403 3 0.006665 71429 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 42.277 26.641 42314000 0 29299000 13014000 0 0 0 0 0 0 0 0 0 0 0 0 5487 3992 4984 47308;47309;47310 37350;37351 37350 2 AVESLMAANEEK Oxidation (M) 1306.6075 0.60748134 3180 Q86W92 PPFIBP1 Liprin-beta-1 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28.238 27.677 2 3.4652E-09 29940 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 142 116.1 367150000 7893500 26597000 0 19233000 26703000 24924000 29253000 19841000 22447000 31992000 41009000 34639000 28131000 28031000 26461000 5488 3180 4985 47311;47312;47313;47314;47315;47316;47317;47318;47319;47320;47321;47322;47323;47324 37352;37353;37354;37355;37356;37357;37358;37359;37360;37361;37362;37363 37354 4795 12 AVESLMAANEEK Unmodified 1290.6126 0.61256672 3180 Q86W92 PPFIBP1 Liprin-beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.5 1.8 1 13 1 1 1 1 1 1 2 1 1 1 1 1 1 42.717 42.532 2 2.7599E-06 46218 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 128.17 107.3 668430000 0 1204100 0 42442000 43219000 47046000 43926000 58250000 34745000 58741000 79108000 67289000 58142000 40412000 93906000 5489 3180 4985 47325;47326;47327;47328;47329;47330;47331;47332;47333;47334;47335;47336;47337;47338 37364;37365;37366;37367;37368;37369;37370;37371;37372;37373;37374;37375;37376 37367 13 AVESRVTQEEIK Acetyl (Protein N-term) 1429.7413 0.7412727 151 O00422 SAP18 Histone deacetylase complex subunit SAP18 yes yes 1 0 1 By MS/MS 2.5 0.5 1 1 2 52.82 47.476 2 1.8041E-14 61329 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.53 73.247 470110000 0 470110000 0 0 0 0 0 0 0 0 0 0 0 0 0 5490 151 4986 47339;47340 37377;37378 37377 2 AVESRVTQEEIK Unmodified 1387.7307 0.73070802 151 O00422 SAP18 Histone deacetylase complex subunit SAP18 yes yes 0 0 1 By MS/MS 2 0 1 1 30.442 27.245 3 0.029831 34567 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 42.095 16.084 19144000 0 0 19144000 0 0 0 0 0 0 0 0 0 0 0 0 5491 151 4986 47341 37379 37379 0 AVETAAAHGSKPNVYANR Unmodified 1854.9337 0.93365835 1146 P22735 TGM1 Protein-glutamine gamma-glutamyltransferase K yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 2 1 1 2 1 1 2 2 2 2 22.413 22.641 3;4 5.8578E-15 23470 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 73.464 52.525 288210000 0 0 0 102380000 3184700 0 6985100 30864000 2242400 12484000 29575000 63099000 22157000 15242000 0 5492 1146 4987 47342;47343;47344;47345;47346;47347;47348;47349;47350;47351;47352;47353;47354;47355;47356;47357 37380;37381;37382;37383;37384;37385;37386;37387;37388;37389 37380 9 AVETLSPDWEFDRVDDGSQK Acetyl (Protein N-term) 2335.0604 0.06043459 2652 Q2M389 KIAA1033 WASH complex subunit 7 yes yes 1 0 1 By MS/MS By MS/MS 2.25 0.433 3 1 3 1 88.263 84.414 2;3 2.9132E-119 104662 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 225.85 216.34 172240000 0 171160000 1083900 0 0 0 0 0 0 0 0 0 0 0 0 5493 2652 4988 47358;47359;47360;47361 37390;37391 37391 2 AVETPPLSSVNLLEGLSR Unmodified 1881.0207 0.020742027 2463 Q14C86 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 92.354 92.453 2 3.0368E-13 107147 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 113.65 104.64 49936000 0 0 0 0 2641200 2691500 2477800 4263600 0 11460000 4710100 3622900 0 3916000 14153000 5494 2463 4989 47362;47363;47364;47365;47366;47367;47368;47369;47370 37392;37393;37394;37395;37396;37397;37398;37399 37394 8 AVETVHNLCCNENK Unmodified 1686.7454 0.74538858 3258 Q8IXH7 NELFCD Negative elongation factor C/D yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 30.491 26.49 3 0.0085811 33263 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 44.511 40.339 115120000 0 105050000 10073000 0 0 0 0 0 0 0 0 0 0 0 0 5495 3258 4990 47371;47372;47373 37400;37401;37402 37402 2 AVEVAGNYDGESSDELRNGK Unmodified 2108.9611 0.9610549 2269 Q13315 ATM Serine-protein kinase ATM yes yes 0 0 1 By MS/MS 2 0 1 1 46.945 41.498 3 0.015054 53905 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 21.848 13.458 7757800 0 7757800 0 0 0 0 0 0 0 0 0 0 0 0 0 5496 2269 4991 47374 37403 37403 1 AVEVQGPSLESGDHGK Unmodified 1608.7744 0.77436375 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 1 2 2 2 2 1 2 2 2 2 37.227 37.401 2;3 1.8713E-27 40840 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 131.17 103.16 752320000 0 0 0 39480000 45657000 5182800 60202000 64849000 49339000 61994000 63213000 84264000 107690000 76701000 93751000 5497 2172 4992 47375;47376;47377;47378;47379;47380;47381;47382;47383;47384;47385;47386;47387;47388;47389;47390;47391;47392;47393;47394;47395;47396 37404;37405;37406;37407;37408;37409;37410;37411;37412;37413;37414;37415;37416;37417;37418;37419 37414 14 AVEYFQDNSPDSPELNK Unmodified 1951.88 0.87995103 5058 Q9UPT5 EXOC7 Exocyst complex component 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 61.877 61.136 2 2.1224E-54 75925 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 152.47 145.56 142120000 0 70660000 0 3690000 4553600 4722600 5411000 0 3270400 8765200 8017200 10635000 6988100 6359700 9045900 5498 5058 4993 47397;47398;47399;47400;47401;47402;47403;47404;47405;47406;47407;47408;47409 37420;37421;37422;37423;37424;37425;37426;37427;37428;37429;37430;37431 37421 12 AVEYGLIQPNQDGE Unmodified 1531.7155 0.71545188 4387 Q9H3U1 UNC45A Protein unc-45 homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.71 3.15 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71.98 72.453 2 0.00060434 79027 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.719 57.415 105510000 6201300 0 0 5376500 4346100 8734700 6672200 4661900 4515100 10351000 12422000 12579000 8577000 7399900 13672000 5499 4387 4994 47410;47411;47412;47413;47414;47415;47416;47417;47418;47419;47420;47421;47422;47423 37432;37433;37434;37435;37436;37437;37438;37439;37440;37441 37433 9 AVEYLLMGIPGDR Oxidation (M) 1448.7334 0.73335055 1746 P54727 RAD23B UV excision repair protein RAD23 homolog B yes yes 0 1 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 80.336 80.41 2 3.7091E-08 92217 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 101.93 76.69 61807000 0 0 0 605080 0 0 2584500 0 0 0 13074000 11248000 0 11166000 23129000 5500 1746 4995 47424;47425;47426;47427;47428;47429 37442;37443;37444;37445 37445 2837 4 AVEYLLMGIPGDR Unmodified 1432.7384 0.73843593 1746 P54727 RAD23B UV excision repair protein RAD23 homolog B yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 86.052 86.205 2 0.0052066 99158 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 49.35 37.137 4787900 0 0 0 0 0 0 0 0 0 0 3059800 0 0 1728100 0 5501 1746 4995 47430;47431 37446 37446 1 AVEYNALFK Unmodified 1053.5495 0.54949617 362 O43747 AP1G1 AP-1 complex subunit gamma-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 66.966 66.618 2 0.016428 75227 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 56.547 34.416 166250000 0 9184000 0 5888500 6234800 22107000 9559200 8723200 7678700 18564000 11669000 18561000 12882000 12731000 22467000 5502 362 4996 47432;47433;47434;47435;47436;47437;47438;47439;47440;47441;47442;47443;47444 37447;37448;37449 37449 2 AVFADLDLR Acetyl (Protein N-term) 1060.5553 0.55530983 1976 P78346 RPP30 Ribonuclease P protein subunit p30 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 94.692 94.809 2 0.003751 110223 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 62.546 48.875 22482000 0 0 0 0 2331000 0 1384700 1389000 1737500 3877700 3283300 2142800 0 2880900 3455100 5503 1976 4997 47445;47446;47447;47448;47449;47450;47451;47452;47453 37450;37451;37452;37453 37450 4 AVFADLDLRAGSDLK Acetyl (Protein N-term) 1631.8519 0.85188578 1976 P78346 RPP30 Ribonuclease P protein subunit p30 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 94.703 90.264 2 3.7711E-42 113152 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 152.32 124.41 91626000 18567000 69886000 3172600 0 0 0 0 0 0 0 0 0 0 0 0 5504 1976 4998 47454;47455;47456;47457;47458 37454;37455;37456;37457;37458;37459;37460 37454 7 AVFDANNK Unmodified 877.42938 0.42938104 2219 Q12979 ABR Active breakpoint cluster region-related protein yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 21.021 17.603 2 0.014432 22042 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 95.793 59.206 413850000 0 69367000 344490000 0 0 0 0 0 0 0 0 0 0 0 0 5505 2219 4999 47459;47460;47461 37461;37462;37463 37463 3 AVFDETYPDPVR Unmodified 1407.667 0.66704513 1578 P49588 AARS Alanine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.472 68.55 2 1.0173E-14 78582 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 155.84 144.25 442690000 0 0 0 11733000 10155000 29407000 18139000 18134000 12887000 35420000 58294000 52830000 24984000 45793000 124920000 5506 1578 5000 47462;47463;47464;47465;47466;47467;47468;47469;47470;47471;47472;47473 37464;37465;37466;37467;37468;37469;37470;37471;37472;37473;37474;37475;37476;37477;37478;37479 37471 16 AVFHEEEQR Unmodified 1143.5309 0.530886 193 O14617 AP3D1 AP-3 complex subunit delta-1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 14.726 14.906 3 0.00828 13686 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.579 41.366 84088000 0 0 0 4726800 3803500 0 5705000 6849500 0 9747700 6799800 12376000 13794000 0 20286000 5507 193 5001 47474;47475;47476;47477;47478;47479;47480;47481;47482 37480;37481;37482;37483 37482 4 AVFHEEEQRRPK Unmodified 1524.7797 0.77972389 193 O14617 AP3D1 AP-3 complex subunit delta-1 yes yes 0 0 2 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 13.004 13.158 4 0.031694 12420 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 43.68 34.63 200960000 0 0 0 13251000 0 20562000 12304000 9967400 11856000 14471000 0 37713000 31782000 16336000 32715000 5508 193 5002 47483;47484;47485;47486;47487;47488;47489;47490;47491;47492 37484;37485;37486;37487 37484 1 AVFPCPSEPALSK Unmodified 1401.6962 0.69623677 217 O14802 POLR3A DNA-directed RNA polymerase III subunit RPC1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 67.267 66.513 2 0.0051421 84514 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.04 75.028 105840000 0 57545000 0 0 3561400 5322600 3813700 2871500 3505400 5683800 4217400 0 5671600 5623600 8026900 5509 217 5003 47493;47494;47495;47496;47497;47498;47499;47500;47501;47502;47503;47504 37488;37489 37488 1 AVFPEGPCEEPLQLRK Unmodified 1868.9455 0.94546859 3944 Q96P48 ARAP1 Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 71.999 72.192 3 2.7009E-07 82508 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.69 69.643 51301000 0 0 0 0 0 5571300 6322500 0 4426000 8691400 5912600 4610900 0 5035400 10731000 5510 3944 5004 47505;47506;47507;47508;47509;47510;47511;47512 37490;37491;37492;37493;37494;37495;37496;37497;37498 37495 9 AVFPLLYVR Unmodified 1076.6383 0.6382516 3361 Q8N6R0 METTL13 Methyltransferase-like protein 13 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 89.215 89.323 2 0.031208 104095 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 47.849 44.102 27568000 0 0 0 0 948240 4854200 1076800 1929000 2247000 2042000 1719200 2776100 1168100 1708900 7098300 5511 3361 5005 47513;47514;47515;47516;47517;47518;47519;47520;47521;47522;47523 37499 37499 1 AVFPSIVGR Unmodified 944.54435 0.54435122 1951;1815;1958 P60709;Q6S8J3;A5A3E0;P0CG38;P63261;P68032;P63267;P68133;P62736 ACTB;POTEE;POTEF;POTEI;ACTG1;ACTC1;ACTG2;ACTA1;ACTA2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, aortic smooth muscle no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.635 70.707 2 0.005209 81221 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 80.229 43.208 983930000 0 0 0 68870000 60269000 95322000 62857000 62561000 51087000 90034000 85269000 136580000 86495000 63080000 121500000 5512 1815;1951;1958 5006 47524;47525;47526;47527;47528;47529;47530;47531;47532;47533;47534;47535 37500;37501;37502;37503;37504;37505;37506;37507;37508;37509;37510;37511;37512 37500 11 AVFPSIVGRPR Unmodified 1197.6982 0.6982261 1951;1815;1958 P60709;Q6S8J3;A5A3E0;P0CG38;P63261;P68032;P63267;P68133;P62736 ACTB;POTEE;POTEF;POTEI;ACTG1;ACTC1;ACTG2;ACTA1;ACTA2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, aortic smooth muscle no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.48 1.97 5 72 2 2 1 8 6 8 6 8 4 5 4 9 5 4 5 66.384 66.351 2;3 3.9346E-42 70453 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 200.54 148.75 47039000000 13388000 1690300 547550 2748400000 1946800000 5008800000 3804700000 3124500000 3543100000 2977500000 3176400000 7194500000 4325900000 2408800000 6764200000 5513 1815;1951;1958 5007 47536;47537;47538;47539;47540;47541;47542;47543;47544;47545;47546;47547;47548;47549;47550;47551;47552;47553;47554;47555;47556;47557;47558;47559;47560;47561;47562;47563;47564;47565;47566;47567;47568;47569;47570;47571;47572;47573;47574;47575;47576;47577;47578;47579;47580;47581;47582;47583;47584;47585;47586;47587;47588;47589;47590;47591;47592;47593;47594;47595;47596;47597;47598;47599;47600;47601;47602;47603;47604;47605;47606;47607;47608;47609;47610;47611;47612 37513;37514;37515;37516;37517;37518;37519;37520;37521;37522;37523;37524;37525;37526;37527;37528;37529;37530;37531;37532;37533;37534;37535;37536;37537;37538;37539;37540;37541;37542;37543;37544;37545;37546;37547;37548;37549;37550;37551;37552;37553;37554;37555;37556;37557;37558;37559;37560;37561;37562;37563;37564;37565;37566;37567;37568;37569;37570;37571;37572;37573;37574;37575;37576;37577;37578;37579;37580;37581;37582;37583;37584;37585;37586;37587;37588;37589;37590;37591;37592;37593;37594;37595;37596;37597;37598;37599;37600;37601;37602;37603;37604;37605;37606;37607 37595 80 AVFQANQENLPILK Unmodified 1583.8671 0.86714192 792 P05023 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.916 79.975 2 0.0012148 92114 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.201 61.765 65586000 0 0 0 1990700 4626800 4335500 4248400 5128700 3161400 6357000 6501500 8569500 4913500 5359100 10394000 5514 792 5008 47613;47614;47615;47616;47617;47618;47619;47620;47621;47622;47623;47624 37608;37609;37610;37611;37612;37613;37614;37615 37610 6 AVFQFYQR Unmodified 1057.5345 0.53451481 4190 Q9BVJ7 DUSP23 Dual specificity protein phosphatase 23 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.824 65.91 2 0.0038171 75654 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 132.94 79.387 239610000 0 0 0 11014000 11795000 20098000 20674000 18064000 13893000 19966000 20691000 31082000 21103000 21738000 29496000 5515 4190 5009 47625;47626;47627;47628;47629;47630;47631;47632;47633;47634;47635;47636 37616;37617;37618;37619;37620;37621;37622 37616 4 AVFSLAR Unmodified 762.43882 0.43882351 341 O43548 TGM5 Protein-glutamine gamma-glutamyltransferase 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 6 1 1 1 1 1 1 52.583 52.508 2 0.024701 60249 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 82.263 10.242 25185000 0 0 0 5800500 2095900 2319500 2480300 10001000 0 0 2487500 0 0 0 0 5516 341 5010 47637;47638;47639;47640;47641;47642 37623;37624 37624 2 AVFVDLEPTVIDEIR Unmodified 1714.9142 0.91415169 1962 P68366 TUBA4A Tubulin alpha-4A chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 2 1 1 1 1 1 2 1 1 1 2 2 92.474 92.534 2;3 0.00052601 107469 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 63.76 49.07 57350000 0 0 0 2380600 2236200 2108700 1444000 3599900 1763200 14103000 7815500 4559500 1324400 4801000 11214000 5517 1962 5011 47643;47644;47645;47646;47647;47648;47649;47650;47651;47652;47653;47654;47655;47656;47657;47658 37625;37626;37627;37628;37629;37630;37631;37632;37633;37634;37635;37636;37637;37638;37639 37626 15 AVFVDLEPTVIDEVR Unmodified 1700.8985 0.89850163 1961;3031;4093 P68363;Q71U36;Q9BQE3 TUBA1B;TUBA1A;TUBA1C Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.84 1.11 1 50 1 2 4 5 4 3 4 5 5 4 3 6 5 89.463 89.38 2;3 4.651E-35 104101 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 186.81 164.78 9686400000 4106500 0 0 150630000 443650000 517770000 364090000 531980000 456170000 1812800000 1456500000 1110400000 355990000 924280000 1558000000 5518 1961;3031;4093 5012 47659;47660;47661;47662;47663;47664;47665;47666;47667;47668;47669;47670;47671;47672;47673;47674;47675;47676;47677;47678;47679;47680;47681;47682;47683;47684;47685;47686;47687;47688;47689;47690;47691;47692;47693;47694;47695;47696;47697;47698;47699;47700;47701;47702;47703;47704;47705;47706;47707;47708;47709 37640;37641;37642;37643;37644;37645;37646;37647;37648;37649;37650;37651;37652;37653;37654;37655;37656;37657;37658;37659;37660;37661;37662;37663;37664;37665;37666;37667;37668;37669;37670;37671;37672;37673;37674;37675;37676;37677;37678;37679;37680;37681;37682;37683;37684;37685;37686;37687;37688;37689;37690;37691;37692;37693;37694;37695;37696;37697;37698;37699;37700;37701;37702;37703;37704;37705;37706;37707;37708;37709;37710;37711;37712 37675 64 AVFVDLEPTVIDEVRTGTYR Unmodified 2279.1798 0.17976186 1961;3031;4093 P68363;Q71U36;Q9BQE3 TUBA1B;TUBA1A;TUBA1C Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain no no 0 0 1 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 88.506 88.534 3 3.3204E-05 102761 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 54.974 45.79 9118900 0 0 0 1688100 0 0 0 0 777510 1973000 0 0 0 0 4680300 5519 1961;3031;4093 5013 47710;47711;47712;47713 37713;37714;37715;37716 37713 4 AVFVPDIYSR Unmodified 1165.6132 0.61315906 596 O94874 UFL1 E3 UFM1-protein ligase 1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 76.505 76.499 2 0.0064671 88228 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 76.064 55.439 21200000 0 0 0 2224900 1639800 1663100 0 3024300 0 2137500 2565900 4813100 3131100 0 0 5520 596 5014 47714;47715;47716;47717;47718;47719;47720;47721 37717;37718 37717 2 AVGAQASVGSR Unmodified 1001.5254 0.52540669 4704 Q9NWV8 BABAM1 BRISC and BRCA1-A complex member 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 14.028 14.226 2 0.0002916 13807 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 93.649 37.973 61288000 0 0 0 3322400 0 5777900 0 0 0 9075200 10638000 0 10376000 2143600 19956000 5521 4704 5015 47722;47723;47724;47725;47726;47727;47728 37719;37720;37721;37722 37722 1 AVGASFPLYEPAK Unmodified 1348.7027 0.70270235 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.835 73.901 2 2.1699E-08 85075 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 108.47 88.683 218560000 0 0 0 13061000 18044000 15469000 16536000 16738000 13212000 16195000 21875000 25585000 16159000 16086000 29602000 5522 1492 5016 47729;47730;47731;47732;47733;47734;47735;47736;47737;47738;47739;47740 37723;37724;37725;37726;37727;37728;37729;37730;37731;37732;37733;37734 37732 12 AVGDGILCNTYIDSYK Unmodified 1787.84 0.84000047 2696 Q53EL6 PDCD4 Programmed cell death protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 79.449 79.581 2 3.1969E-27 91639 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 125.54 111.53 52231000 0 0 0 0 0 4180500 0 0 4548900 5136600 5222600 8422600 4985500 6080400 13654000 5523 2696 5017 47741;47742;47743;47744;47745;47746;47747;47748 37735;37736;37737;37738;37739;37740;37741;37742;37743 37737 9 AVGDGIVLCK Unmodified 1030.5481 0.54811597 986 P13797 PLS3 Plastin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 4 1 1 1 1 1 1 1 1 1 1 1 1 1 51.607 50.228 2 9.5878E-05 61595 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 121.62 82.076 3348700000 0 2840500000 31033000 25771000 20196000 39885000 25000000 17317000 20972000 37931000 58218000 48134000 31320000 43974000 108410000 5524 986 5018 47749;47750;47751;47752;47753;47754;47755;47756;47757;47758;47759;47760;47761;47762;47763;47764;47765 37744;37745;37746;37747;37748;37749;37750;37751;37752;37753;37754;37755;37756;37757;37758;37759 37752 15 AVGEIVQDYDSDK Unmodified 1437.6624 0.66235368 3209 Q86YQ8 CPNE8 Copine-8 yes yes 0 0 0 By MS/MS 2 0 1 1 55.43 49.615 2 1.4706E-08 64197 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.39 83.272 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5525 3209 5019 47766 37760 37760 1 AVGFLEIGYQK Unmodified 1223.655 0.65502388 36 A8K2U0 A2ML1 Alpha-2-macroglobulin-like protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 79.314 78.862 2 0.012009 91530 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 62.582 43.806 5136400 0 0 0 5136400 0 0 0 0 0 0 0 0 0 0 0 5526 36 5020 47767 37761 37761 1 AVGFSSGTENPHGVK Unmodified 1485.7212 0.72120596 2663 Q32P28 LEPRE1 Prolyl 3-hydroxylase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.6 3.67 3 7 1 1 1 1 1 1 1 1 1 1 31.453 30.451 3 6.488E-05 43137 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.264 90.378 171020000 51883000 36415000 0 0 0 9552800 0 8149800 5776100 11353000 9436300 11474000 0 0 26980000 5527 2663 5021 47768;47769;47770;47771;47772;47773;47774;47775;47776;47777 37762;37763;37764;37765;37766 37765 5 AVGHPFVIQLGR Unmodified 1292.7353 0.73533988 237 O14980 XPO1 Exportin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 70.319 70.541 3 1.352E-05 81095 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 82.417 59.299 79303000 0 0 0 0 0 17489000 0 7129000 0 7681700 6001200 8865800 0 6601800 25534000 5528 237 5022 47778;47779;47780;47781;47782;47783;47784;47785;47786 37767;37768;37769;37770;37771;37772;37773;37774;37775 37767 9 AVGIVGIER Unmodified 912.53927 0.53926584 3168 Q86VN1 VPS36 Vacuolar protein-sorting-associated protein 36 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 53.295 53.242 2 0.0052334 60389 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 79.469 30.907 48993000 0 0 0 3568900 2624500 0 5401300 3610300 0 0 0 0 0 0 33788000 5529 3168 5023 47787;47788;47789;47790;47791 37776;37777;37778;37779 37776 4 AVGKVIPELNGK Unmodified 1223.7238 0.72377215 782 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 0 0 1 By MS/MS 10 0 1 1 46.631 47.368 3 0.049553 52328 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.725 29.192 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5530 782 5024 47792 37780 37780 1 AVGLQPAGDVNLP Unmodified 1249.6667 0.6666512 629 O95229 ZWINT ZW10 interactor yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 80.408 80.499 2 0.0076849 92820 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 56.563 46.782 90505000 0 0 0 2969500 0 0 0 7997200 7574500 0 12934000 17598000 7913400 8272400 25246000 5531 629 5025 47793;47794;47795;47796;47797;47798;47799;47800;47801 37781;37782;37783 37783 3 AVGMSNDGR Unmodified 905.40251 0.40251436 4393 Q9H4A3 WNK1 Serine/threonine-protein kinase WNK1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 9.2029 9.3152 2 0.033277 6888 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 46.994 9.9003 20434000 0 0 0 0 2755700 3856400 0 6245200 2755500 212670 4608800 0 0 0 0 5532 4393 5026 47802;47803;47804;47805;47806;47807 37784;37785 37784 2 AVGMSNDGRFLK Oxidation (M) 1309.6449 0.6448699 4393 Q9H4A3 WNK1 Serine/threonine-protein kinase WNK1 yes yes 0 1 1 By MS/MS 2 0 1 1 38.09 31.592 3 0.013218 43561 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.149 34.52 32735000 32735000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5533 4393 5027 47808 37786 37786 5853 1 AVGMSNDGRFLK Unmodified 1293.65 0.64995528 4393 Q9H4A3 WNK1 Serine/threonine-protein kinase WNK1 yes yes 0 0 1 By MS/MS 2 0 1 1 53.77 45.707 3 0.0029372 62639 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.555 48.179 33417000 33417000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5534 4393 5027 47809 37787 37787 1 AVGPASILK Unmodified 854.52255 0.52255314 627 O95218 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 55.914 54.329 1;2 0.0050074 70695 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.27 40.722 2790100000 939950000 830210000 83656000 46313000 47446000 39767000 55172000 61358000 43120000 79250000 107370000 115500000 104770000 111470000 124780000 5535 627 5028 47810;47811;47812;47813;47814;47815;47816;47817;47818;47819;47820;47821;47822;47823;47824;47825;47826 37788;37789;37790;37791;37792;37793;37794;37795;37796;37797;37798;37799;37800;37801;37802;37803;37804;37805;37806;37807;37808 37795 21 AVGPEITK Unmodified 813.45962 0.45961853 1271 P30153 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.38 3.9 2 3 11 2 2 1 1 1 1 1 1 1 1 1 1 1 1 35.842 35.581 2 0.0075386 24994 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.296 47.993 3134000000 93302000 2364900000 28606000 0 33871000 64539000 36553000 34475000 23615000 62940000 59917000 89608000 53557000 54818000 133220000 5536 1271 5029 47827;47828;47829;47830;47831;47832;47833;47834;47835;47836;47837;47838;47839;47840;47841;47842 37809;37810;37811;37812;37813;37814;37815;37816;37817;37818;37819 37813 11 AVGPTAEADK Unmodified 957.47673 0.47672516 2236 Q13123 IK Protein Red yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.877 13.032 2 0.0018498 11243 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 96.331 60.837 342400000 0 0 0 24211000 22963000 31935000 28193000 21251000 20015000 34463000 35354000 33306000 36383000 25837000 28492000 5537 2236 5030 47843;47844;47845;47846;47847;47848;47849;47850;47851;47852;47853;47854 37820;37821;37822;37823;37824;37825;37826;37827;37828;37829;37830;37831;37832;37833 37828 14 AVGQDTLLR Unmodified 971.53999 0.53999412 3983 Q96S55 WRNIP1 ATPase WRNIP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 2 2 1 2 2 1 2 2 1 1 1 1 26.212 26.326 2 0.023663 10766 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 50.966 9.4637 166760000 0 0 0 11471000 13589000 16561000 22107000 13299000 10695000 20289000 24960000 17806000 4959800 4195200 6826600 5538 3983 5031 47855;47856;47857;47858;47859;47860;47861;47862;47863;47864;47865;47866;47867;47868;47869;47870;47871;47872 37834;37835;37836 37836 3 AVGQGCVEIGSQRYK Unmodified 1650.8148 0.81478877 820 P06400 RB1 Retinoblastoma-associated protein yes yes 0 0 1 By MS/MS 2 0 1 1 44.227 37.362 3 0.017943 51416 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 28.58 10.88 8089900 8089900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5539 820 5032 47873 37837 37837 1 AVGQSVGGAFSSAK Unmodified 1264.6412 0.64116473 3392 Q8NBF6 AVL9 Late secretory pathway protein AVL9 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40.287 39.577 2 0.00051231 44191 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 68.355 42.796 105040000 22201000 17464000 0 3982200 2407500 4104300 5123100 4811200 3641000 6590800 8353200 6352500 6371300 5030100 8604300 5540 3392 5033 47874;47875;47876;47877;47878;47879;47880;47881;47882;47883;47884;47885;47886;47887 37838;37839;37840;37841;37842;37843;37844;37845;37846;37847;37848;37849;37850 37839 13 AVGRLEAVSHTSDMHR Unmodified 1764.8689 0.86894961 2055 Q01518 CAP1 Adenylyl cyclase-associated protein 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 13 1 1 1 1 1 1 2 1 1 1 2 28.89 29.142 3;4 6.5907E-06 30633 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 78.285 60.485 483890000 0 0 0 10987000 1658100 52541000 10035000 0 13813000 16346000 58066000 60569000 29180000 30409000 200290000 5541 2055 5034 47888;47889;47890;47891;47892;47893;47894;47895;47896;47897;47898;47899;47900 37851;37852;37853;37854;37855;37856;37857;37858 37858 8 AVGSISSTAFDIR Unmodified 1322.683 0.68302954 465 O75153 CLUH Clustered mitochondria protein homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.247 72.318 2 4.5095E-08 83186 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 128.81 85.728 179830000 0 0 0 6089000 8143100 15754000 9595400 15537000 6143200 15893000 16665000 21823000 9527700 17293000 37363000 5542 465 5035 47901;47902;47903;47904;47905;47906;47907;47908;47909;47910;47911;47912 37859;37860;37861;37862;37863;37864;37865;37866;37867;37868;37869;37870 37860 12 AVGTPGGGGGGAVPGISAMSR Unmodified 1754.8734 0.87336628 1546 P48634 PRRC2A Protein PRRC2A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.383 64.474 2 2.8506E-53 73456 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 119.87 110.21 121810000 0 0 0 7124000 6661400 7404400 7520300 8246700 5760100 11629000 11607000 12789000 10661000 13044000 19359000 5543 1546 5036 47913;47914;47915;47916;47917;47918;47919;47920;47921;47922;47923;47924 37871;37872;37873;37874;37875;37876;37877;37878;37879;37880;37881;37882 37875 12 AVGTPGGGGGGAVPGISAMSR Oxidation (M) 1770.8683 0.86828091 1546 P48634 PRRC2A Protein PRRC2A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 50.1 50.823 2 3.5939E-28 56923 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 98.943 83.741 16325000 0 0 0 0 0 0 0 0 0 0 0 16325000 0 0 0 5544 1546 5036 47925;47926;47927 37883;37884;37885 37885 2454 3 AVGTPVAAAPSSGFAPGFLR Unmodified 1871.9894 0.98938232 1531 P47974 ZFP36L2 Zinc finger protein 36, C3H1 type-like 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 84.004 84.11 2 3.9461E-37 97126 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 135.94 122.26 70563000 0 0 0 0 3791700 4734200 6555100 6065700 4751100 7691700 6879100 9466300 5284200 5992700 9350900 5545 1531 5037 47928;47929;47930;47931;47932;47933;47934;47935;47936;47937;47938 37886;37887;37888;37889;37890;37891;37892;37893 37889 8 AVGTPVAAAPSSGFAPGFLRR Unmodified 2028.0905 0.090493347 1531 P47974 ZFP36L2 Zinc finger protein 36, C3H1 type-like 2 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 78.268 78.415 3 1.3484E-05 90239 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.348 32.81 42752000 0 0 0 0 0 7557900 2277700 6326400 0 4236200 0 7200100 0 0 15154000 5546 1531 5038 47939;47940;47941;47942;47943;47944;47945;47946 37894;37895;37896;37897;37898;37899;37900 37896 7 AVGTQTLSGAGLLK Unmodified 1314.7507 0.75071518 2323 Q13596 SNX1 Sorting nexin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.519 67.602 2 8.971E-20 76632 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 139.15 97.613 410910000 0 0 0 21319000 19127000 43951000 30454000 25188000 17758000 45388000 40527000 44643000 32977000 28495000 61086000 5547 2323 5039 47947;47948;47949;47950;47951;47952;47953;47954;47955;47956;47957;47958 37901;37902;37903;37904;37905;37906;37907;37908;37909;37910;37911;37912 37904 12 AVGVGPGSSAGSNAR Unmodified 1285.6375 0.63747633 616 O95049 TJP3 Tight junction protein ZO-3 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.692 19.893 2 5.1374E-19 20591 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 109.16 87.07 150850000 0 0 0 14860000 13430000 12448000 14177000 10260000 8170500 15539000 12761000 13135000 9461400 10676000 15935000 5548 616 5040 47959;47960;47961;47962;47963;47964;47965;47966;47967;47968;47969;47970 37913;37914;37915;37916;37917;37918;37919;37920;37921;37922;37923;37924;37925 37913 12 AVGWGATQLVEAADK Unmodified 1514.7729 0.77290718 461 O75146 HIP1R Huntingtin-interacting protein 1-related protein yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 81.493 77.877 2 0.01013 94591 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 71.085 53.611 70413000 0 65156000 5257300 0 0 0 0 0 0 0 0 0 0 0 0 5549 461 5041 47971;47972 37926 37926 1 AVHADFFNDFEDLFDDDDIQ Unmodified 2386.9866 0.98660094 3585 Q8WXC6 MYEOV2 Myeloma-overexpressed gene 2 protein yes yes 0 0 0 By MS/MS 2 0 1 1 100.09 91.955 2 8.4456E-13 118458 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 128.31 123.92 20154000 20154000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5550 3585 5042 47973 37927 37927 1 AVHEDIVAVELLPK Unmodified 1531.861 0.86099391 5110 Q9Y2L1 DIS3 Exosome complex exonuclease RRP44 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 81.282 80.502 3 0.00075951 92540 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 60.364 48.218 22133000 0 0 4592900 0 0 9937400 0 0 0 7602200 0 0 0 0 0 5551 5110 5043 47974;47975;47976 37928;37929;37930 37928 3 AVHEFLATLNHK Unmodified 1378.7357 0.73573382 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 0 By MS/MS 10 0 1 1 49.61 50.321 3 0.02482 55905 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.068 28.701 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5552 3443 5044 47977 37931 37931 1 AVHEQLAALSQGPISK Unmodified 1647.8944 0.8944193 1189 P25440 BRD2 Bromodomain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 56.879 57.13 3 0.011556 64872 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 32.366 21.708 39246000 0 0 0 0 0 0 7054000 0 3828400 7471900 0 0 3736700 0 17155000 5553 1189 5045 47978;47979;47980;47981;47982 37932;37933 37932 2 AVHEQLAALSQPQQNK Unmodified 1760.9169 0.91694566 441 O60885 BRD4 Bromodomain-containing protein 4 yes yes 0 0 0 By MS/MS 3 0 1 1 46.907 42.048 3 0.0087091 52204 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 28.956 22.34 2288700 0 2288700 0 0 0 0 0 0 0 0 0 0 0 0 0 5554 441 5046 47983 37934 37934 1 AVHISNPK Unmodified 864.48175 0.48175096 4625 Q9NSD9 FARSB Phenylalanine--tRNA ligase beta subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 15.604 12.319 2 0.012373 15658 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 134.06 93.953 578180000 369540000 71769000 136880000 0 0 0 0 0 0 0 0 0 0 0 0 5555 4625 5047 47984;47985;47986 37935;37936 37936 1 AVHTNYHAALR Unmodified 1251.6473 0.64725316 4666 Q9NVE7 PANK4 Pantothenate kinase 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 5 1 2 2 19.845 19.709 2;3 0.00016972 20338 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 84.658 66.081 197780000 0 0 0 52455000 54428000 90894000 0 0 0 0 0 0 0 0 0 5556 4666 5048 47987;47988;47989;47990;47991 37937;37938;37939;37940;37941;37942 37941 6 AVHVESVQPLSLENLALR Unmodified 1974.0898 0.089824645 4529 Q9HD47 RANGRF Ran guanine nucleotide release factor yes yes 0 0 0 By MS/MS 10 0 1 1 84.688 84.867 3 0.0047889 98022 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.773 24.115 6684700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6684700 5557 4529 5049 47992 37943 37943 1 AVIDLNNR Unmodified 913.49813 0.49812931 909 P0DN76;Q01081 U2AF1 Splicing factor U2AF 35 kDa subunit yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.814 39.993 2 0.026089 43333 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.167 27.982 1637300000 0 0 0 152100000 106530000 130710000 118940000 75643000 86207000 177780000 130960000 186950000 151790000 109830000 209870000 5558 909 5050 47993;47994;47995;47996;47997;47998;47999;48000;48001;48002;48003;48004 37944;37945 37945 2 AVIEHNLLSASK Unmodified 1280.7089 0.70885036 4137 Q9BT78 COPS4 COP9 signalosome complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.65 1.63 1 22 1 1 1 2 2 2 2 2 2 2 2 2 2 45.695 45.565 2;3 2.4592E-05 51050 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 102.53 84.306 657270000 11266000 0 0 8166200 8284200 48451000 35802000 42114000 29350000 52031000 78697000 80210000 69639000 61645000 131620000 5559 4137 5051 48005;48006;48007;48008;48009;48010;48011;48012;48013;48014;48015;48016;48017;48018;48019;48020;48021;48022;48023;48024;48025;48026;48027 37946;37947;37948;37949;37950;37951;37952;37953;37954;37955;37956;37957;37958;37959;37960;37961;37962;37963;37964;37965;37966 37961 14 AVIELLEK Unmodified 913.54843 0.54843354 2971 Q6UB35 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 0 0 0 By MS/MS 3 0 1 1 74.947 71.275 2 0.046406 85772 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 67.981 17.854 3896700 0 3896700 0 0 0 0 0 0 0 0 0 0 0 0 0 5560 2971 5052 48028 37967 37967 1 AVIEMSSK Oxidation (M) 879.43717 0.43716853 2114 Q05397 PTK2 Focal adhesion kinase 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 10.114 10.104 2 0.043532 8704 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 43.124 25.357 4055000 0 0 0 0 810730 1121000 1238700 884660 0 0 0 0 0 0 0 5561 2114 5053 48029;48030;48031;48032 37968 37968 1 AVIEQRQCTGVWNQK Unmodified 1815.905 0.90500076 4446 Q9H871 RMND5A Protein RMD5 homolog A yes yes 0 0 1 By MS/MS 2 0 1 1 49.712 41.887 3 0.022241 58027 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 36.519 23.006 10454000 10454000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5562 4446 5054 48033 37969 37969 1 AVIETADRAK Unmodified 1072.5877 0.58767259 2162 Q08752 PPID Peptidyl-prolyl cis-trans isomerase D yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 18.462 14.915 2 4.4968E-05 20019 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.38 25.819 127100000 31423000 65735000 29939000 0 0 0 0 0 0 0 0 0 0 0 0 5563 2162 5055 48034;48035;48036;48037 37970;37971;37972;37973;37974 37971 4 AVIFCLSADK Unmodified 1122.5743 0.57433072 1822 P60981 DSTN Destrin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 77.206 72.398 2 0.010479 91125 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.464 47.334 118080000 70342000 43037000 4704600 0 0 0 0 0 0 0 0 0 0 0 0 5564 1822 5056 48038;48039;48040;48041 37975;37976;37977;37978 37975 4 AVILIGGPQK Unmodified 994.61752 0.61751616 3878 Q96IJ6 GMPPA Mannose-1-phosphate guanyltransferase alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 58.165 56.838 2 0.0016582 64010 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 89.55 70.19 249190000 62415000 22105000 1440900 8992900 8810100 17390000 12540000 10684000 9125700 13650000 13678000 21297000 11099000 13954000 22010000 5565 3878 5057 48042;48043;48044;48045;48046;48047;48048;48049;48050;48051;48052;48053;48054;48055;48056;48057 37979;37980;37981;37982;37983;37984;37985;37986;37987;37988;37989;37990;37991;37992;37993;37994;37995 37988 17 AVINSAGYK Unmodified 921.49198 0.4919813 4003 Q96TA1 FAM129B Niban-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 25.38 25.564 2 0.0035515 27733 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 108.46 45.744 279490000 0 0 0 24102000 18615000 0 37615000 39162000 18953000 0 0 35656000 39908000 0 65475000 5566 4003 5058 48058;48059;48060;48061;48062;48063;48064;48065 37996;37997;37998;37999;38000 38000 5 AVIPEAVVEVLDPK Unmodified 1477.8392 0.83919583 423 O60678 PRMT3 Protein arginine N-methyltransferase 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 94.432 93.06 2 2.3774E-09 115229 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.08 67.478 444380000 57044000 352950000 14968000 0 959060 1376300 896380 0 1614700 4792700 3461100 2815500 710340 2791400 0 5567 423 5059 48066;48067;48068;48069;48070;48071;48072;48073;48074;48075;48076;48077;48078;48079 38001;38002;38003;38004;38005;38006 38001 6 AVIQGLETLRGEHR Unmodified 1577.8638 0.86378788 4321 Q9H0B6 KLC2 Kinesin light chain 2 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 2 1 2 2 1 1 1 2 1 2 54.002 54.276 3;4 0.0016029 60207 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.343 44.291 139250000 0 0 0 0 0 21329000 3322000 11647000 19395000 6476600 5514800 13960000 17400000 5169900 35040000 5568 4321 5060 48080;48081;48082;48083;48084;48085;48086;48087;48088;48089;48090;48091;48092;48093;48094 38007;38008;38009;38010;38011;38012;38013 38008 7 AVISYTEGLK Unmodified 1079.5863 0.58627561 692 O95801 TTC4 Tetratricopeptide repeat protein 4 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 54.329 54.643 2 0.0063034 62153 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 65.465 48.925 78932000 0 0 0 0 0 9220200 0 0 4787000 10515000 12703000 10377000 7442600 8909700 14978000 5569 692 5061 48095;48096;48097;48098;48099;48100;48101;48102 38014;38015;38016;38017 38014 4 AVITNILLR Unmodified 1011.6441 0.64406526 3339 Q8N556 AFAP1 Actin filament-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.026 80.085 2 0.0045489 92095 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.472 21.905 49096000 0 0 0 2131300 3048100 3682500 3847300 4425400 2978600 6192600 3809400 6599500 3473100 2428200 6480300 5570 3339 5062 48103;48104;48105;48106;48107;48108;48109;48110;48111;48112;48113;48114 38018;38019;38020;38021;38022;38023;38024;38025;38026;38027;38028;38029 38021 12 AVIVLVENFYK Unmodified 1293.7333 0.7332742 3837 Q96FQ6 S100A16 Protein S100-A16 yes yes 0 0 0 By MS/MS 2 0 1 1 93.595 85.465 2 0.023269 110659 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.032 36.799 3473600 3473600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5571 3837 5063 48115 38030 38030 1 AVIVSSPK Unmodified 799.48035 0.48035398 2456 Q14966 ZNF638 Zinc finger protein 638 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 27.468 23.788 2 0.022229 31494 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.753 34.992 82864000 0 81423000 1441200 0 0 0 0 0 0 0 0 0 0 0 0 5572 2456 5064 48116;48117 38031 38031 1 AVKDELLGEKPEVK Unmodified 1553.8665 0.86647322 869 P08651 NFIC Nuclear factor 1 C-type yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 44.449 44.621 3;4 2.0489E-18 49860 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 136.17 116.4 2023100000 0 0 0 94485000 84071000 69473000 164190000 146380000 96197000 186220000 260420000 188380000 208400000 216530000 308400000 5573 869 5065 48118;48119;48120;48121;48122;48123;48124;48125;48126;48127;48128;48129;48130;48131;48132;48133;48134;48135;48136;48137;48138;48139;48140;48141 38032;38033;38034;38035;38036;38037;38038;38039;38040;38041;38042;38043;38044;38045;38046;38047;38048;38049;38050;38051;38052;38053;38054;38055;38056;38057;38058;38059;38060 38042 23 AVKDELLSEKPEIK Unmodified 1597.8927 0.89268797 174 O00712 NFIB Nuclear factor 1 B-type yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 2 2 2 2 2 1 2 2 2 51.089 51.221 3;4 0.0015669 56406 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.448 60.714 560840000 0 0 0 25456000 24828000 0 41064000 43793000 32160000 67678000 56863000 29656000 55020000 62365000 121960000 5574 174 5066 48142;48143;48144;48145;48146;48147;48148;48149;48150;48151;48152;48153;48154;48155;48156;48157;48158;48159;48160;48161;48162 38061;38062;38063;38064;38065;38066;38067 38063 5 AVKDELLSEKPEVK Unmodified 1583.877 0.8770379 2199 Q12857 NFIA Nuclear factor 1 A-type yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 1 2 2 2 2 2 2 2 2 2 45.707 45.882 3;4 6.4595E-18 51626 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 97.073 83.937 1042800000 0 0 0 58559000 60609000 27611000 104320000 64159000 57303000 108010000 107060000 100840000 97087000 110780000 146510000 5575 2199 5067 48163;48164;48165;48166;48167;48168;48169;48170;48171;48172;48173;48174;48175;48176;48177;48178;48179;48180;48181;48182;48183;48184;48185 38068;38069;38070;38071;38072;38073;38074;38075;38076;38077;38078;38079;38080;38081;38082;38083;38084;38085;38086;38087;38088 38070 10 AVLAAASPYFHDK Unmodified 1388.7089 0.70885036 3768 Q96C00 ZBTB9 Zinc finger and BTB domain-containing protein 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 60.326 59.702 3 0.0022568 67721 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 46.797 33.068 120500000 15573000 0 0 10708000 7804800 9402800 9451900 8248300 8183100 9872700 10036000 0 7608500 9095900 14515000 5576 3768 5068 48186;48187;48188;48189;48190;48191;48192;48193;48194;48195;48196;48197 38089;38090;38091;38092;38093;38094;38095;38096;38097;38098;38099;38100 38089 12 AVLAASSSYFR Unmodified 1170.6033 0.60332266 3966 Q96RE7 NACC1 Nucleus accumbens-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.781 61.881 2 0.00064837 71197 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 78.334 53.412 103300000 0 0 0 4347500 5786900 9733400 6450500 8671400 4653300 10836000 10086000 7371100 5647300 7133600 22581000 5577 3966 5069 48198;48199;48200;48201;48202;48203;48204;48205;48206;48207;48208;48209 38101;38102;38103;38104;38105;38106;38107;38108;38109;38110;38111;38112 38112 11 AVLADWVSGK Unmodified 1044.5604 0.56039521 4674 Q9NVN8 GNL3L Guanine nucleotide-binding protein-like 3-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 69.423 69.562 2 0.010197 78966 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 56.432 14.929 83759000 0 0 0 0 5374400 6225900 5541300 6196600 6358000 8082800 8322400 11393000 6621900 6161500 13481000 5578 4674 5070 48210;48211;48212;48213;48214;48215;48216;48217;48218;48219;48220 38113;38114;38115;38116;38117;38118 38116 5 AVLAGQFVK Unmodified 931.5491 0.54910224 4869 Q9UDY8 MALT1 Mucosa-associated lymphoid tissue lymphoma translocation protein 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 52.774 53.214 2 0.021732 59651 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 52.018 28.046 28389000 0 0 0 0 0 0 0 0 0 0 0 0 0 12809000 15580000 5579 4869 5071 48221;48222 38119 38119 1 AVLCPPPVK Unmodified 979.55247 0.55247306 1936 P63000;P60763 RAC1;RAC3 Ras-related C3 botulinum toxin substrate 1;Ras-related C3 botulinum toxin substrate 3 yes no 0 0 0 By MS/MS 10 0 1 1 46.861 47.61 2 0.045414 52967 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 43.214 24.483 7515600 0 0 0 0 0 0 0 0 0 0 0 7515600 0 0 0 5580 1936 5072 48223 38120 38120 1 AVLCVDSTDDLLFTGSK Unmodified 1839.8924 0.89242997 3101 Q7Z4S6 KIF21A Kinesin-like protein KIF21A yes yes 0 0 0 By MS/MS 2 0 1 1 89.428 81.298 2 0.0042852 105629 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.548 57.129 9772600 9772600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5581 3101 5073 48224 38121 38121 1 AVLDALLASK Unmodified 999.59645 0.59644637 2845 Q66K74 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.184 78.245 2 0.040652 89812 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.848 17.762 69223000 0 0 0 3749600 2807900 5444800 4557300 5405600 3638200 10134000 6758200 6815500 4133400 5552400 10226000 5582 2845 5074 48225;48226;48227;48228;48229;48230;48231;48232;48233;48234;48235;48236 38122 38122 1 AVLDEFTAPAEK Unmodified 1289.6503 0.65033243 454 O75113 N4BP1 NEDD4-binding protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 66.133 66.344 2 0.0059699 76463 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 62.303 47.152 16176000 0 0 0 0 0 0 0 2519000 0 0 5103600 0 3450600 5102700 0 5583 454 5075 48237;48238;48239;48240;48241 38123;38124 38124 2 AVLDLESERR Unmodified 1186.6306 0.63060004 2411 Q14527 HLTF Helicase-like transcription factor yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 40.537 40.715 2;3 1.4678E-09 46096 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 144.09 122 2649800000 0 0 0 127380000 137890000 211450000 198550000 203200000 183130000 257750000 284850000 303570000 276680000 204460000 260910000 5584 2411 5076 48242;48243;48244;48245;48246;48247;48248;48249;48250;48251;48252;48253;48254;48255;48256;48257;48258;48259;48260;48261;48262;48263;48264;48265 38125;38126;38127;38128;38129;38130;38131;38132;38133;38134;38135;38136;38137;38138;38139;38140;38141;38142;38143;38144;38145;38146;38147 38145 12 AVLEDPMLK Oxidation (M) 1030.5369 0.53688258 3422 Q8NEB9 PIK3C3 Phosphatidylinositol 3-kinase catalytic subunit type 3 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 52.921 47.577 2 0.02467 61731 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.981 37.312 36903000 0 36903000 0 0 0 0 0 0 0 0 0 0 0 0 0 5585 3422 5077 48266;48267 38148 38148 1 AVLEEGTDVVIK Unmodified 1271.6973 0.69728262 4626 Q9NSE4 IARS2 Isoleucine--tRNA ligase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 67.754 61.451 2 0.0019327 78695 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.2 85.054 83941000 5854500 78086000 0 0 0 0 0 0 0 0 0 0 0 0 0 5586 4626 5078 48268;48269;48270 38149;38150 38149 1 AVLENALR Unmodified 884.50797 0.50796571 3681 Q92890 UFD1L Ubiquitin fusion degradation protein 1 homolog yes yes 0 0 0 By MS/MS By MS/MS By matching By matching 10 0 4 1 1 1 1 43.596 43.699 2 0.011082 49242 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 77.741 22.954 34977000 0 0 0 12489000 0 9599900 0 0 0 5324200 0 0 0 0 7563500 5587 3681 5079 48271;48272;48273;48274 38151;38152 38152 2 AVLENNLGAAVLR Unmodified 1338.7619 0.76194857 4772 Q9NZL9 MAT2B Methionine adenosyltransferase 2 subunit beta yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 74.879 75.1 2 0.00057767 86604 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 101.66 71.1 103250000 0 0 0 0 0 0 0 0 0 0 29065000 0 0 17651000 56531000 5588 4772 5080 48275;48276;48277 38153;38154 38154 2 AVLEQLVGQEVPPAEESPEVTTEAAEASAVEAGSEVSEK Unmodified 3965.9117 0.91171125 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 2 1 1 91.741 86.254 3;4 7.7737E-26 109425 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.268 56.115 32312000 23584000 5548400 3179700 0 0 0 0 0 0 0 0 0 0 0 0 5589 1564 5081 48278;48279;48280;48281 38155;38156;38157;38158;38159;38160 38158 6 AVLFCLSDDK Unmodified 1166.5642 0.56415996 5088 Q9Y281 CFL2 Cofilin-2 yes yes 0 0 0 By MS/MS 3 0 1 1 76.686 73.207 2 0.021712 87825 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 74.464 60.689 46292000 0 46292000 0 0 0 0 0 0 0 0 0 0 0 0 0 5590 5088 5082 48282 38161 38161 1 AVLFCLSEDK Unmodified 1180.5798 0.57981002 1165 P23528 CFL1 Cofilin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 74.259 73.114 2 0.00020551 84022 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 141.39 115.83 3365900000 460770000 1768200000 205500000 18174000 14412000 48151000 16690000 14464000 44508000 46088000 170510000 121380000 26477000 104020000 306560000 5591 1165 5083 48283;48284;48285;48286;48287;48288;48289;48290;48291;48292;48293;48294;48295;48296;48297;48298 38162;38163;38164;38165;38166;38167;38168;38169;38170;38171;38172;38173;38174;38175;38176;38177;38178;38179;38180;38181;38182;38183 38174 22 AVLFCLSEDKK Unmodified 1308.6748 0.67477304 1165 P23528 CFL1 Cofilin-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.74 3.54 7 2 22 4 2 3 2 2 1 2 2 2 2 2 1 2 2 2 63.07 61.472 2;3 1.8853E-08 77980 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 133.57 111.49 2302000000 1447400000 63183000 123240000 26017000 13813000 7560200 23377000 30255000 14328000 22191000 117080000 94358000 28754000 66470000 223950000 5592 1165 5084 48299;48300;48301;48302;48303;48304;48305;48306;48307;48308;48309;48310;48311;48312;48313;48314;48315;48316;48317;48318;48319;48320;48321;48322;48323;48324;48325;48326;48327;48328;48329 38184;38185;38186;38187;38188;38189;38190;38191;38192;38193;38194;38195;38196;38197;38198;38199;38200;38201;38202;38203;38204;38205;38206;38207;38208 38201 19 AVLGANDPEK Unmodified 1012.5189 0.51892433 2569 Q15738 NSDHL Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.648 23.853 2 1.0086E-09 25566 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 149.65 88.865 586990000 0 0 0 46058000 44469000 36962000 43900000 39717000 37583000 54368000 52109000 72791000 56375000 48555000 54101000 5593 2569 5085 48330;48331;48332;48333;48334;48335;48336;48337;48338;48339;48340;48341 38209;38210;38211;38212;38213;38214;38215;38216;38217;38218;38219;38220 38209 3 AVLGHNEDDSSVEISK Unmodified 1698.8061 0.8060578 277 O15360 FANCA Fanconi anemia group A protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 37.752 37.935 3 0.0003445 41928 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 50.077 40.02 59059000 0 0 0 3095000 3507400 5236100 4270000 0 4007800 4991100 5805200 7705900 5546600 5842000 9051900 5594 277 5086 48342;48343;48344;48345;48346;48347;48348;48349;48350;48351;48352 38221;38222;38223;38224;38225;38226;38227 38225 7 AVLGSSPFLSEANAER Unmodified 1646.8264 0.82639932 3468 Q8NI60 ADCK3 Atypical kinase ADCK3, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.343 75.401 2 2.7543E-21 86859 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 117.23 92.378 117940000 0 0 0 5218800 8792800 8502300 10081000 10335000 6646000 12028000 11835000 14201000 8821300 7831900 13643000 5595 3468 5087 48353;48354;48355;48356;48357;48358;48359;48360;48361;48362;48363;48364 38228;38229;38230;38231;38232;38233;38234;38235;38236;38237;38238;38239;38240 38235 13 AVLGTSNFK Unmodified 935.50763 0.50763136 762 P02786 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41.247 40.75 2 0.0051781 46225 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 81.191 47.187 259540000 0 41325000 2955900 11819000 17164000 17163000 19056000 15216000 13348000 16596000 20256000 26053000 20066000 16110000 22416000 5596 762 5088 48365;48366;48367;48368;48369;48370;48371;48372;48373;48374;48375;48376;48377;48378 38241;38242;38243;38244;38245;38246 38246 6 AVLHQPLK Unmodified 904.54944 0.54943659 593 O94855 SEC24D Protein transport protein Sec24D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 29.621 25.215 2 0.010032 35282 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 134.44 67.403 75004000 60118000 8289200 6596300 0 0 0 0 0 0 0 0 0 0 0 0 5597 593 5089 48379;48380;48381 38247;38248 38247 1 AVLHVALR Unmodified 877.54977 0.54977095 829;93 P06744;CON__Q3ZBD7 GPI Glucose-6-phosphate isomerase no no 0 0 0 By MS/MS 10 0 1 1 43.255 43.998 2 0.0043243 48140 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 111.81 76.613 + 71407000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 71407000 5598 829;93 5090 48382 38249 38249 1 AVLIAGQPGTGK Unmodified 1110.6397 0.63970816 5077 Q9Y230 RUVBL2 RuvB-like 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 40.235 40.399 2 5.8695E-08 45771 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 119.68 103.48 1938300000 0 0 0 97825000 121460000 153170000 143510000 131860000 100650000 206550000 244670000 242670000 0 189410000 306560000 5599 5077 5091 48383;48384;48385;48386;48387;48388;48389;48390;48391;48392;48393 38250;38251;38252;38253;38254;38255;38256;38257;38258;38259;38260;38261 38260 12 AVLIDEVCTMNDGPHSALYTMMK 3 Oxidation (M) 2643.1689 0.16888088 2425 Q14671 PUM1 Pumilio homolog 1 yes yes 0 3 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 71.481 71.435 3 5.3005E-05 82168 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 40.012 29.323 37442000 0 0 0 4614100 0 0 8063700 0 0 14269000 0 0 0 10495000 0 5600 2425 5092 48394;48395;48396;48397 38262 38262 3976;3977;3978 1 AVLIPHHK Unmodified 913.54977 0.54977095 5301 Q9Y6Y8 SEC23IP SEC23-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 16.567 16.986 2 0.012144 15624 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.311 57.749 26880000 0 0 0 0 0 0 0 0 0 0 3661500 4422300 6849700 4336200 7610100 5601 5301 5093 48398;48399;48400;48401;48402 38263;38264;38265;38266;38267 38263 5 AVLITDQSILK Unmodified 1199.7125 0.71253876 1204 P26374 CHML Rab proteins geranylgeranyltransferase component A 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 74.867 74.93 2 0.007376 86017 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 54.191 12.315 92383000 0 0 0 4686200 3790600 7981500 4227200 4087100 4517200 9590500 11490000 10244000 4601100 6602000 20566000 5602 1204 5094 48403;48404;48405;48406;48407;48408;48409;48410;48411;48412;48413;48414;48415 38268;38269;38270;38271;38272;38273;38274;38275;38276;38277 38272 10 AVLLAGPPGTGK Unmodified 1079.6339 0.63389451 5086 Q9Y265 RUVBL1 RuvB-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 54.306 53.157 2 1.826E-05 60181 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 105.4 90.621 2584900000 7159300 25541000 0 138970000 135770000 186060000 174080000 181230000 131190000 262650000 242510000 251500000 238590000 218010000 391670000 5603 5086 5095 48416;48417;48418;48419;48420;48421;48422;48423;48424;48425;48426;48427;48428;48429;48430 38278;38279;38280;38281;38282;38283;38284;38285;38286;38287;38288;38289;38290;38291;38292;38293;38294;38295;38296;38297;38298;38299;38300;38301;38302;38303;38304;38305;38306 38280 29 AVLLDLEPR Unmodified 1024.5917 0.59169534 1152 P23258;Q9NRH3 TUBG1;TUBG2 Tubulin gamma-1 chain;Tubulin gamma-2 chain yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.372 75.431 2 0.0050696 86758 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 84.568 64.931 904380000 0 0 0 37120000 49776000 78426000 55372000 69765000 69629000 87558000 89120000 108660000 68007000 67426000 123510000 5604 1152 5096 48431;48432;48433;48434;48435;48436;48437;48438;48439;48440;48441;48442 38307;38308;38309;38310;38311;38312;38313;38314;38315;38316;38317;38318 38316 12 AVLLGPPGAGK Unmodified 978.58622 0.58621603 1748 P54819 AK2 Adenylate kinase 2, mitochondrial;Adenylate kinase 2, mitochondrial, N-terminally processed yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 50.687 50.84 2 0.013578 57254 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 69.198 39.013 460300000 0 0 0 24165000 19102000 46962000 44795000 43470000 26909000 37704000 45421000 50730000 25956000 42606000 52479000 5605 1748 5097 48443;48444;48445;48446;48447;48448;48449;48450;48451;48452;48453;48454 38319;38320;38321 38320 1 AVLLLQEK Unmodified 912.56442 0.56441796 1539 P48449 LSS Lanosterol synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 57.023 57.127 2 0.0099634 64695 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 81.191 40.003 85040000 0 0 0 0 6659000 8735500 8002500 6258400 8932100 10057000 12785000 0 14243000 9367400 0 5606 1539 5098 48455;48456;48457;48458;48459;48460;48461;48462;48463 38322;38323;38324;38325;38326;38327;38328 38322 7 AVLLNEGGLSAK Unmodified 1170.6608 0.66083754 481 O75342 ALOX12B Arachidonate 12-lipoxygenase, 12R-type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 56.958 56.815 2 0.0045551 64572 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 71.614 28.744 51210000 0 0 0 27365000 5311500 0 4670000 0 0 6640500 0 0 7223500 0 0 5607 481 5099 48464;48465;48466;48467;48468;48469 38329;38330;38331;38332;38333;38334 38330 6 AVLLTQDTK Unmodified 987.56006 0.56006086 4176 Q9BV44 THUMPD3 THUMP domain-containing protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 34.033 34.269 2 0.0059097 36956 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.478 33.563 35735000 0 0 0 4823900 0 5764900 0 0 0 5977400 0 7728600 0 0 11440000 5608 4176 5100 48470;48471;48472;48473;48474;48475;48476;48477;48478 38335;38336;38337;38338;38339;38340 38340 6 AVLMENIVYLTNSLELEHIEVK Unmodified 2556.3509 0.35092629 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 99.898 94.07 3 9.5678E-07 119056 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.133 62.021 14553000 14553000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5609 4819 5101 48479;48480 38341;38342;38343 38343 3 AVLNPLCQVDYR Unmodified 1446.7289 0.72893388 2536;2537 Q15436;Q15437 SEC23A;SEC23B Protein transport protein Sec23A;Protein transport protein Sec23B no no 0 0 0 By matching By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 75.892 76.048 2 0.0034351 86912 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 60.398 41.127 13641000 0 0 0 0 0 0 0 1442400 0 0 0 5858400 2237700 4102600 0 5610 2536;2537 5102 48481;48482;48483;48484 38344;38345 38344 2 AVLNPTNADILIETK Unmodified 1610.8879 0.88793694 2419 Q14643 ITPR1 Inositol 1,4,5-trisphosphate receptor type 1 yes yes 0 0 0 By MS/MS 2 0 1 1 84.947 80.204 2 0.00015397 99729 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.02 100.15 22857000 0 22857000 0 0 0 0 0 0 0 0 0 0 0 0 0 5611 2419 5103 48485 38346 38346 1 AVLNPTPIK Unmodified 951.57532 0.57531699 2014 P84095 RHOG Rho-related GTP-binding protein RhoG yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.659 47.822 2 0.017183 52498 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.902 40.531 175380000 0 0 0 9413500 7084700 12546000 11798000 11455000 9736200 19356000 21520000 20695000 17251000 12278000 22248000 5612 2014 5104 48486;48487;48488;48489;48490;48491;48492;48493;48494;48495;48496;48497 38347;38348;38349;38350;38351;38352;38353;38354 38349 8 AVLPEGQDVTSGFSR Unmodified 1561.7736 0.77363546 2664 Q32P41 TRMT5 tRNA (guanine(37)-N1)-methyltransferase yes yes 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 65.676 65.992 2 0.0027191 75616 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 46.592 30.963 11752000 0 0 0 0 0 0 0 0 0 0 3926700 4666600 0 3158600 0 5613 2664 5105 48498;48499;48500 38355 38355 1 AVLPVAESFGFADEIRK Unmodified 1847.9781 0.97814893 3076 Q7Z2Z2 EFTUD1 Elongation factor Tu GTP-binding domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 92.656 86.135 3 1.8423E-05 109103 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.819 62.48 29631000 16361000 13269000 0 0 0 0 0 0 0 0 0 0 0 0 0 5614 3076 5106 48501;48502 38356;38357 38356 2 AVLQAVGQLVQK Unmodified 1252.7503 0.75032125 3212 Q86YV9 HPS6 Hermansky-Pudlak syndrome 6 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 75.223 75.315 2 0.0020175 87124 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 64.268 34.601 74697000 0 0 0 0 3981700 7684500 7237400 6005300 5016900 11244000 8189800 12762000 5432000 7143900 0 5615 3212 5107 48503;48504;48505;48506;48507;48508;48509;48510;48511;48512 38358;38359;38360;38361;38362;38363;38364;38365;38366;38367 38365 10 AVLQLYPENSEQLELITTQATK Unmodified 2488.3061 0.30608459 358 O43709 WBSCR22 Probable 18S rRNA (guanine-N(7))-methyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 2 2 2 2 2 89.845 89.965 2;3 7.9812E-07 104478 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 53.779 50.212 35794000 0 0 0 0 1941300 0 0 1134500 1123700 12610000 6232400 2425600 0 2562000 7764100 5616 358 5108 48513;48514;48515;48516;48517;48518;48519;48520;48521;48522;48523;48524;48525 38368;38369;38370;38371;38372;38373;38374;38375 38371 8 AVLQNLK Unmodified 784.48069 0.48068833 4386 Q9H3S7 PTPN23 Tyrosine-protein phosphatase non-receptor type 23 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 32.566 32.699 2 0.050843 34600 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 61.997 8.8994 50134000 0 0 0 3957600 3741900 4973100 4868300 4034600 3716500 0 4957900 0 4652500 5889900 9341400 5617 4386 5109 48526;48527;48528;48529;48530;48531;48532;48533;48534;48535 38376 38376 1 AVLQSMSGR Unmodified 947.48585 0.48585006 4814;4517;2670 Q9P2D1;Q9HCK8;Q3L8U1 CHD7;CHD8;CHD9 Chromodomain-helicase-DNA-binding protein 7;Chromodomain-helicase-DNA-binding protein 8;Chromodomain-helicase-DNA-binding protein 9 no no 0 0 0 By MS/MS 10 0 1 1 28.465 29.16 2 0.027398 30486 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.423 15.907 18477000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18477000 5618 4814;4517;2670 5110 48536 38377 38377 1 AVLQWTK Unmodified 844.48069 0.48068833 3866 Q96HE7 ERO1L ERO1-like protein alpha yes yes 0 0 0 By MS/MS 10 0 1 1 48.292 49.015 2 0.031266 54310 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.975 36.946 15197000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15197000 5619 3866 5111 48537 38378 38378 1 AVLREEDTSNTTFGPADLK Unmodified 2063.0171 0.017113212 2195 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 64.916 63.61 3 0.00020909 72592 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 52.045 45.778 70812000 4855500 0 12601000 0 0 8132100 0 0 0 7004200 0 8342800 10483000 6319200 13074000 5620 2195 5112 48538;48539;48540;48541;48542;48543;48544;48545 38379;38380;38381;38382;38383;38384;38385 38379 7 AVLSDSPQLSEGK Unmodified 1329.6776 0.67760981 3098 Q7Z4H7 HAUS6 HAUS augmin-like complex subunit 6 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 2 1 1 1 1 1 1 44.399 44.75 2 3.6561E-10 49860 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 117.67 89.274 112400000 0 0 0 0 0 8423600 8914700 0 9571900 0 14864000 23764000 10274000 12556000 24035000 5621 3098 5113 48546;48547;48548;48549;48550;48551;48552;48553;48554;48555;48556 38386;38387;38388;38389;38390;38391;38392;38393;38394;38395;38396;38397 38396 12 AVLSERDLYR Unmodified 1220.6513 0.65133548 5011 Q9ULX6 AKAP8L A-kinase anchor protein 8-like yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.574 45.743 3 0.0032327 51284 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 60.518 30.583 217610000 0 0 0 11442000 11550000 18025000 13358000 15932000 11317000 19125000 19047000 29625000 21829000 20596000 25761000 5622 5011 5114 48557;48558;48559;48560;48561;48562;48563;48564;48565;48566;48567;48568 38398;38399;38400;38401;38402;38403 38398 6 AVLSTDVQNTPVNLQTSSK Unmodified 2001.0378 0.037848654 3755 Q96BD5 PHF21A PHD finger protein 21A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 2 18 2 2 2 1 1 1 2 1 1 2 2 1 2 67.48 66.96 2;3 1.7386E-73 76840 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 212.17 196.62 317760000 0 31595000 0 16762000 24798000 16644000 12169000 14920000 24274000 16289000 17064000 51711000 37011000 15674000 38851000 5623 3755 5115 48569;48570;48571;48572;48573;48574;48575;48576;48577;48578;48579;48580;48581;48582;48583;48584;48585;48586;48587;48588 38404;38405;38406;38407;38408;38409;38410;38411;38412;38413;38414;38415;38416;38417;38418;38419 38412 16 AVLTIDEK Unmodified 887.4964 0.49639797 739 P01009 SERPINA1 Alpha-1-antitrypsin;Short peptide from AAT yes yes 0 0 0 By matching By matching By MS/MS By matching By matching By matching 10 0 6 1 1 1 1 1 1 41.146 41.162 2 0.013906 45589 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 71.342 30.04 42040000 0 0 0 16749000 1814800 0 0 13079000 1916000 0 2198200 0 6282600 0 0 5624 739 5116 48589;48590;48591;48592;48593;48594 38420;38421;38422 38420 3 AVLVAGLYDNVGK Unmodified 1317.7293 0.72925145 3095 Q7Z478 DHX29 ATP-dependent RNA helicase DHX29 yes yes 0 0 0 By MS/MS 3 0 1 1 78.638 75.267 2 0.050833 90339 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 40.496 26.091 2221400 0 2221400 0 0 0 0 0 0 0 0 0 0 0 0 0 5625 3095 5117 48595 38423 38423 1 AVLVDLEPGTMDSVR Oxidation (M) 1616.808 0.80797206 1963;2678 P68371;Q3ZCM7 TUBB4B;TUBB8 Tubulin beta-4B chain;Tubulin beta-8 chain no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 2 1 1 2 2 2 2 1 2 2 73.269 73.323 2;3 2.8481E-28 84245 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 140.78 124.53 12020000000 0 0 0 582320000 1001100000 877090000 801790000 694140000 688610000 1180800000 1421500000 1585800000 1099700000 1039900000 1046900000 5626 1963;2678 5118 48596;48597;48598;48599;48600;48601;48602;48603;48604;48605;48606;48607;48608;48609;48610;48611;48612;48613;48614;48615;48616 38424;38425;38426;38427;38428;38429;38430;38431;38432;38433;38434;38435;38436;38437;38438;38439;38440;38441;38442;38443;38444;38445;38446;38447;38448;38449;38450;38451;38452;38453;38454;38455 38426 3158 31 AVLVDLEPGTMDSVR Unmodified 1600.8131 0.81305744 1963;2678 P68371;Q3ZCM7 TUBB4B;TUBB8 Tubulin beta-4B chain;Tubulin beta-8 chain no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 36 3 3 3 3 3 3 3 3 3 3 3 3 80.447 80.506 2;3 1.0127E-112 92880 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 201.6 166.09 7483700000 0 0 0 180760000 348370000 509350000 338410000 585320000 362850000 684630000 933530000 863830000 503250000 724110000 1449300000 5627 1963;2678 5118 48617;48618;48619;48620;48621;48622;48623;48624;48625;48626;48627;48628;48629;48630;48631;48632;48633;48634;48635;48636;48637;48638;48639;48640;48641;48642;48643;48644;48645;48646;48647;48648;48649;48650;48651;48652 38456;38457;38458;38459;38460;38461;38462;38463;38464;38465;38466;38467;38468;38469;38470;38471;38472;38473;38474;38475;38476;38477;38478;38479;38480;38481;38482 38469 19 AVLVDLSGTLHIEDAAVPGAQEALK Unmodified 2516.3486 0.34861811 4336 Q9H0R4 HDHD2 Haloacid dehalogenase-like hydrolase domain-containing protein 2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 93.954 88.132 3 6.2274E-08 112295 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.217 59.683 19834000 19834000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5628 4336 5119 48653;48654 38483;38484;38485 38485 3 AVLVVHPDK Unmodified 976.57057 0.57056597 452 O75061 DNAJC6 Putative tyrosine-protein phosphatase auxilin yes yes 0 0 0 By MS/MS 2 0 1 1 38.115 31.617 2 0.021764 44001 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.665 25.922 24400000 24400000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5629 452 5120 48655 38486 38486 1 AVLWVSADGLR Unmodified 1185.6506 0.6506072 1597 P49757 NUMB Protein numb homolog yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 79.487 79.58 2 0.031398 91647 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 49.418 18.731 31979000 0 0 0 0 2360200 2958200 2488400 4954600 3190500 4766400 0 4236000 2424200 0 4600000 5630 1597 5121 48656;48657;48658;48659;48660;48661;48662;48663;48664 38487 38487 1 AVMDDFAAFVEK Unmodified 1341.6275 0.6274885 64 CON__P02768-1;P02768 ALB Serum albumin yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 86.314 86.382 2 8.2966E-06 100407 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 109.42 102.83 + 301330000 0 0 0 45757000 2626600 4384600 1620100 194190000 5471500 10594000 9457600 10714000 4764700 2855500 8894600 5631 64 5122 48665;48666;48667;48668;48669;48670;48671;48672;48673;48674;48675;48676 38488;38489;38490;38491;38492;38493;38494;38495;38496;38497;38498;38499;38500;38501;38502 38501 15 AVMDDFAAFVEK Oxidation (M) 1357.6224 0.62240312 64 CON__P02768-1;P02768 ALB Serum albumin yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 2 1 1 1 2 1 1 1 2 78.131 78.09 2 1.3268E-05 91065 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 104.52 89.372 + 897500000 0 0 0 318290000 0 0 0 485760000 0 22267000 0 0 71184000 0 0 5632 64 5122 48677;48678;48679;48680;48681;48682;48683;48684;48685;48686;48687;48688 38503;38504;38505;38506;38507;38508;38509;38510;38511;38512;38513;38514 38513 71 11 AVMEQIPEIQK Unmodified 1284.6748 0.67477304 4491 Q9HAV4 XPO5 Exportin-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 63.206 63.37 2 0.00030437 72740 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 113.71 103 156300000 0 0 0 0 7784800 17137000 10744000 0 0 17170000 17227000 24381000 16063000 12453000 33343000 5633 4491 5123 48689;48690;48691;48692;48693;48694;48695;48696;48697;48698 38515;38516;38517;38518 38517 3 AVMHFLVNHVK Oxidation (M) 1309.6965 0.69651154 154 O00429 DNM1L Dynamin-1-like protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 34.54 34.943 3 0.0019952 38935 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 55.084 48.037 70189000 0 0 0 0 0 15610000 0 0 0 8591600 5150400 11836000 10768000 0 18232000 5634 154 5124 48699;48700;48701;48702;48703;48704 38519;38520 38519 212 2 AVMHFLVNHVK Unmodified 1293.7016 0.70159692 154 O00429 DNM1L Dynamin-1-like protein yes yes 0 0 0 By MS/MS 10 0 1 1 53.167 53.825 3 0.039543 60349 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.088 20.132 9766600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9766600 5635 154 5124 48705 38521 38521 1 AVMISAIEK Unmodified 960.5314 0.53140327 2528 Q15393 SF3B3 Splicing factor 3B subunit 3 yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 53.122 53.336 2 0.0078297 60165 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 71.379 52.597 461300000 0 0 0 0 25765000 26222000 22847000 24001000 22429000 39873000 38601000 74525000 39311000 50532000 97193000 5636 2528 5125 48706;48707;48708;48709;48710;48711;48712;48713;48714;48715;48716 38522;38523;38524;38525;38526;38527 38525 6 AVMISAIEK Oxidation (M) 976.52632 0.52631789 2528 Q15393 SF3B3 Splicing factor 3B subunit 3 yes yes 0 1 0 By MS/MS 10 0 1 1 44.211 44.358 2 0.024321 49501 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 45.489 18.003 29423000 0 0 0 0 0 0 0 0 29423000 0 0 0 0 0 0 5637 2528 5125 48717 38528 38528 1 AVMLPGAR Unmodified 813.45309 0.45309337 4323 Q9H0D6 XRN2 5'-3' exoribonuclease 2 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS 10 0 10 2 1 1 1 1 1 1 1 1 41.72 41.903 2 0.027249 46549 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 57.463 33.668 74801000 0 0 0 0 8806000 0 6661600 4734300 4405900 9257600 8966300 9718800 8326400 0 13924000 5638 4323 5126 48718;48719;48720;48721;48722;48723;48724;48725;48726;48727 38529;38530 38529 2 AVMLPGAR Oxidation (M) 829.44801 0.44800799 4323 Q9H0D6 XRN2 5'-3' exoribonuclease 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 36.367 36.482 2 0.015999 40099 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 59.641 31.534 46783000 0 0 0 7584300 0 0 13490000 0 8848200 0 0 16861000 0 0 0 5639 4323 5126 48728;48729;48730;48731 38531;38532;38533 38532 5784 3 AVMSNLSAHGVK Unmodified 1212.6285 0.62849155 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.52 3.05 3 1 17 2 1 1 1 1 2 1 1 1 2 1 2 1 2 2 35.204 34.365 2;3 0.00039398 37413 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 80.755 53.625 838130000 512460000 12855000 26052000 7045200 6943000 35853000 6426200 7506700 3601500 39504000 12700000 66203000 6964200 32646000 61370000 5640 3641 5127 48732;48733;48734;48735;48736;48737;48738;48739;48740;48741;48742;48743;48744;48745;48746;48747;48748;48749;48750;48751;48752 38534;38535;38536;38537;38538;38539;38540;38541;38542;38543;38544;38545;38546;38547;38548 38545 13 AVMSNLSAHGVK Oxidation (M) 1228.6234 0.62340617 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.82 3.45 5 3 20 2 4 2 2 2 1 2 2 1 1 2 2 2 1 2 21.272 20.261 2;3 8.6627E-05 26104 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 97.734 81.48 343730000 73805000 67965000 36293000 11378000 17712000 1827400 20013000 11751000 9713400 2314500 21489000 28012000 17106000 1314800 23038000 5641 3641 5127 48753;48754;48755;48756;48757;48758;48759;48760;48761;48762;48763;48764;48765;48766;48767;48768;48769;48770;48771;48772;48773;48774;48775;48776;48777;48778;48779;48780 38549;38550;38551;38552;38553;38554;38555;38556;38557;38558;38559;38560;38561;38562;38563;38564 38553 5143 11 AVMTSIK Oxidation (M) 764.41023 0.4102255 1441 P41252 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 0 1 0 By matching By MS/MS By MS/MS 2.33 0.471 4 2 1 4 1 14.96 11.602 1;2 0.017844 15410 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.383 34.491 230500000 15574000 202210000 12718000 0 0 0 0 0 0 0 0 0 0 0 0 5642 1441 5128 48781;48782;48783;48784;48785;48786 38565;38566;38567 38566 2268 2 AVNAMILAGK Oxidation (M) 1002.5532 0.55320134 4906 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 7.71 3.61 2 5 1 1 1 1 1 1 1 45.562 43.607 2 0.0053265 49168 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 60.895 28.941 46554000 7732000 18412000 0 3920200 2260700 0 3735500 0 0 5820600 0 4673600 0 0 0 5643 4906 5129 48787;48788;48789;48790;48791;48792;48793 38568;38569 38568 6261 2 AVNAMILAGK Unmodified 986.55829 0.55828672 4906 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 66.276 57.981 2 0.016293 77740 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.464 31.846 17742000 17742000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5644 4906 5129 48794 38570 38570 1 AVNDGLFNQYISQQEYK Unmodified 2015.9589 0.95887005 4988 Q9UL63 MKLN1 Muskelin yes yes 0 0 0 By MS/MS 3 0 1 1 82.697 79.425 2 0.00034467 95175 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 84.718 59.864 3781500 0 3781500 0 0 0 0 0 0 0 0 0 0 0 0 0 5645 4988 5130 48795 38571 38571 1 AVNDVNGLK Unmodified 928.49779 0.49779495 4066 Q99848 EBNA1BP2 Probable rRNA-processing protein EBP2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.243 23.447 2 0.005064 24379 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 84.743 49.542 95507000 0 0 0 4207500 4670800 4525100 5077500 4373700 3400700 8724000 9780900 13175000 15174000 10310000 12089000 5646 4066 5131 48796;48797;48798;48799;48800;48801;48802;48803;48804;48805;48806;48807 38572;38573;38574;38575;38576;38577;38578;38579;38580;38581;38582;38583 38580 11 AVNFTEVNEENK Unmodified 1392.6521 0.65212334 2695 Q52LW3 ARHGAP29 Rho GTPase-activating protein 29 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 45.535 42.886 2 2.0322E-05 55105 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.85 95.645 20240000 0 14836000 0 0 0 0 0 0 0 0 0 0 0 5404200 0 5647 2695 5132 48808;48809 38584;38585 38584 2 AVNPFLADVDK Unmodified 1187.6186 0.61863837 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.17 3.85 2 1 3 2 1 1 1 1 75.784 73.961 2 0.0083766 92632 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.893 41.639 389200000 0 277170000 4247200 0 25729000 0 0 41499000 0 40558000 0 0 0 0 0 5648 2361 5133 48810;48811;48812;48813;48814;48815 38586;38587;38588;38589 38586 4 AVNSATGVPTV Unmodified 1014.5346 0.53457439 958 P11940;Q9H361 PABPC1;PABPC3 Polyadenylate-binding protein 1;Polyadenylate-binding protein 3 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.27 3.47 2 1 12 3 1 1 1 1 1 1 1 1 1 1 1 1 59.374 59.647 1;2 0.00028563 59928 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 93.267 79.272 735540000 156350000 0 0 28079000 38207000 53602000 39755000 34356000 31856000 52132000 57558000 70947000 47579000 48752000 76362000 5649 958 5134 48816;48817;48818;48819;48820;48821;48822;48823;48824;48825;48826;48827;48828;48829;48830 38590;38591;38592;38593;38594;38595;38596;38597;38598;38599;38600;38601;38602;38603;38604;38605 38604 12 AVNTLNEALEFAK Unmodified 1418.7405 0.74054442 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 4 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 81.219 80.007 2 1.2389E-29 99512 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 162.36 129.1 1932600000 30610000 1752200000 14755000 3496100 6103400 9203800 4733100 7039600 7316100 11674000 12923000 16255000 7643300 12691000 35951000 5650 1300 5135 48831;48832;48833;48834;48835;48836;48837;48838;48839;48840;48841;48842;48843;48844;48845;48846 38606;38607;38608;38609;38610;38611;38612;38613;38614;38615;38616;38617;38618;38619;38620;38621 38609 16 AVNTQALSGAGILR Unmodified 1369.7678 0.76776223 428 O60749 SNX2 Sorting nexin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.644 69.719 2 7.433E-23 79314 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 150.21 123.75 258890000 0 0 0 11990000 14341000 23858000 19416000 17557000 10063000 25718000 28268000 29854000 19889000 16095000 41839000 5651 428 5136 48847;48848;48849;48850;48851;48852;48853;48854;48855;48856;48857;48858 38622;38623;38624;38625;38626;38627;38628;38629;38630;38631;38632;38633 38625 12 AVNVYSTSVTSDNLSR Acetyl (Protein N-term) 1753.8483 0.84825697 2564 Q15691 MAPRE1 Microtubule-associated protein RP/EB family member 1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 74.337 74.394 2 2.3296E-21 85217 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 144.57 138.6 209100000 0 0 0 7002300 10343000 19879000 14801000 13279000 6464600 0 33425000 25628000 13022000 18941000 46314000 5652 2564 5137 48859;48860;48861;48862;48863;48864;48865;48866;48867;48868;48869 38634;38635;38636;38637;38638;38639;38640;38641;38642;38643 38636 10 AVPAALILRESPSMK Acetyl (Protein N-term) 1623.9018 0.90181287 5281 Q9Y6G5 COMMD10 COMM domain-containing protein 10 yes yes 1 0 1 By MS/MS 2 0 1 1 95.2 87.07 2 1.8024E-06 112543 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 121.04 104.95 23818000 23818000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5653 5281 5138 48870 38644 38644 1 AVPAQEVK Unmodified 840.47052 0.47051757 2433 Q14686 NCOA6 Nuclear receptor coactivator 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.087 14.25 2 0.011082 13580 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 77.741 36.438 61197000 0 0 0 3343100 4168500 4111200 4396600 3751600 4087600 6887200 6704700 4934700 6788400 7319100 4704600 5654 2433 5139 48871;48872;48873;48874;48875;48876;48877;48878;48879;48880;48881;48882 38645;38646;38647;38648;38649;38650 38650 6 AVPEGFVIPR Unmodified 1083.6077 0.60767975 1481 P43490 NAMPT Nicotinamide phosphoribosyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.93 73.99 2 0.001774 85186 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 95.531 61.734 256800000 0 0 0 14656000 9343300 17877000 13409000 13994000 12238000 17015000 29491000 27103000 13068000 26758000 61848000 5655 1481 5140 48883;48884;48885;48886;48887;48888;48889;48890;48891;48892;48893;48894 38651;38652;38653;38654;38655;38656;38657;38658;38659;38660;38661;38662;38663 38658 13 AVPENGNLGPIQAEVK Unmodified 1634.8628 0.86278482 5225 Q9Y597 KCTD3 BTB/POZ domain-containing protein KCTD3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 64.839 64.923 2 0.019027 74664 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 43.544 30.191 36430000 0 0 0 2699400 2295700 0 0 0 2161300 3960000 4601000 7121800 3845000 4000800 5744500 5656 5225 5141 48895;48896;48897;48898;48899;48900;48901;48902;48903;48904 38664;38665 38665 2 AVPETEDVQASVSDTAQQPSEEQSK Unmodified 2659.2097 0.2096776 2876 Q6FIF0 ZFAND6 AN1-type zinc finger protein 6 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS 8.4 3.2 1 4 1 1 1 1 1 52.755 51.523 3 1.6174E-07 58496 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.099 42.057 41048000 5365100 0 0 0 0 0 0 0 0 0 7835800 7681000 0 5058900 15107000 5657 2876 5142 48905;48906;48907;48908;48909 38666;38667;38668 38666 3 AVPETRPNHTIYINNLNEK Acetyl (Protein N-term) 2264.1549 0.1549441 877 P09012 SNRPA U1 small nuclear ribonucleoprotein A yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.52 3.05 3 1 17 1 2 1 1 1 1 1 1 1 2 2 1 2 2 2 65.488 64.546 2;3 1.1503E-72 84467 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 158.58 149.63 2982200000 586950000 110720000 219950000 85252000 91964000 117540000 136330000 138070000 141940000 207290000 201020000 229740000 157350000 185180000 372910000 5658 877 5143 48910;48911;48912;48913;48914;48915;48916;48917;48918;48919;48920;48921;48922;48923;48924;48925;48926;48927;48928;48929;48930 38669;38670;38671;38672;38673;38674;38675;38676;38677;38678;38679;38680;38681;38682;38683;38684;38685;38686;38687;38688;38689;38690 38673 20 AVPGGGMPNMGQQPAPQVQQPGLVTPVAQGMGSGAHTADPEK 3 Oxidation (M) 4139.9463 0.94629659 2171 Q09472 EP300 Histone acetyltransferase p300 yes yes 0 3 0 By MS/MS 10 0 1 1 65.161 65.126 4 2.9496E-19 74669 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 44.641 40.72 10153000 0 0 0 0 0 10153000 0 0 0 0 0 0 0 0 0 5659 2171 5144 48931 38691 38691 3490;3491;3492 1 AVPIGTPPK Unmodified 878.52255 0.52255314 3133 Q86TB9 PATL1 Protein PAT1 homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.839 35.02 2 0.0051781 38347 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 81.191 49.887 793980000 0 0 0 44023000 45973000 52242000 56177000 63033000 53776000 76235000 79975000 99659000 72296000 73960000 76634000 5660 3133 5145 48932;48933;48934;48935;48936;48937;48938;48939;48940;48941;48942;48943 38692;38693;38694;38695;38696;38697;38698;38699;38700;38701;38702;38703 38694 10 AVPKPDLDSYVFLR Unmodified 1618.8719 0.87189295 4118 Q9BRT9 GINS4 DNA replication complex GINS protein SLD5;DNA replication complex GINS protein SLD5, N-terminally processed yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 81.482 81.688 3 0.0080108 94137 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.033 27.342 7772700 0 0 0 0 0 0 0 0 0 0 2087000 0 0 0 5685800 5661 4118 5146 48944;48945 38704 38704 1 AVPLALALISVSNPR Unmodified 1519.9086 0.9086128 2252 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 17 1 2 2 2 1 3 1 2 1 2 95.243 95.31 2;3 4.0239E-27 111381 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 134.3 123.78 105270000 0 0 0 1120900 6762900 14763000 1647100 0 1009100 38167000 10285000 18186000 931600 0 12392000 5662 2252 5147 48946;48947;48948;48949;48950;48951;48952;48953;48954;48955;48956;48957;48958;48959;48960;48961;48962 38705;38706;38707;38708;38709;38710;38711 38710 6 AVPLAVPLGQTEVFQALQR Unmodified 2036.1419 0.14186022 3177 Q86W42 THOC6 THO complex subunit 6 homolog yes yes 0 0 0 By MS/MS 10 0 1 1 94.763 94.91 3 0.0016617 110029 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.777 35.88 2863300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2863300 5663 3177 5148 48963 38712 38712 1 AVPMLTPK Unmodified 855.48881 0.48881017 5054 Q9UPQ0 LIMCH1 LIM and calponin homology domains-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 55.912 48.919 2 0.023989 63463 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.784 68.736 68377000 13516000 54861000 0 0 0 0 0 0 0 0 0 0 0 0 0 5664 5054 5149 48964;48965 38713 38713 1 AVPPAVPTDDGWDNQNW Unmodified 1880.8329 0.83294126 3362 Q8N6T3 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 84.369 84.548 2 0.036205 97622 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.336 28.178 5409300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5409300 5665 3362 5150 48966 38714 38714 1 AVPQPGAFQR Unmodified 1069.5669 0.56687757 3004 Q6ZRI6 C15orf39 Uncharacterized protein C15orf39 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 40.692 40.93 2 0.014408 45461 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 50.703 33.318 57106000 0 0 0 0 3855500 5156700 4394400 0 3735100 9109800 7339600 9430600 0 6401400 7682400 5666 3004 5151 48967;48968;48969;48970;48971;48972;48973;48974;48975 38715;38716 38715 2 AVPQSPENVAK Unmodified 1138.5982 0.59823728 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 2 1 1 1 1 1 1 1 1 2 1 27.493 27.658 2 0.00027324 29746 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 113.71 90.278 482110000 0 0 0 22351000 51456000 26573000 30985000 28661000 25256000 35722000 34498000 57993000 30251000 107920000 30441000 5667 3023 5152 48976;48977;48978;48979;48980;48981;48982;48983;48984;48985;48986;48987;48988;48989 38717;38718;38719;38720;38721;38722;38723;38724;38725;38726;38727;38728;38729;38730;38731 38720 15 AVPREELFVTSK Unmodified 1374.7507 0.75071518 999 P14550 AKR1A1 Alcohol dehydrogenase [NADP(+)] yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.54 3.69 4 9 2 1 1 1 1 1 1 1 1 1 1 1 54.709 52.786 2;3 1.612E-05 67214 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 136.48 109.59 1110000000 862730000 88292000 30209000 3333000 2056600 0 3351400 4608500 5841500 0 19069000 15904000 0 14154000 60448000 5668 999 5153 48990;48991;48992;48993;48994;48995;48996;48997;48998;48999;49000;49001;49002 38732;38733;38734;38735;38736;38737;38738;38739 38738 6 AVPSSFSPFVEFK Unmodified 1440.7289 0.7289171 2935 Q6P4R8 NFRKB Nuclear factor related to kappa-B-binding protein yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 86.42 86.528 2 0.0026909 100074 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.466 46.837 40072000 0 0 0 0 1864300 3755300 3154900 3615400 3174300 4125400 3035200 4249300 3035800 2271200 7790800 5669 2935 5154 49003;49004;49005;49006;49007;49008;49009;49010;49011;49012;49013 38740;38741;38742;38743;38744;38745;38746 38742 6 AVPSWFVR Unmodified 960.51814 0.51813647 1441 P41252 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.705 74.769 2 0.0048543 86227 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 114.02 82.72 174340000 0 0 0 6556300 5895600 15802000 9258700 14037000 9214300 13133000 15650000 21550000 11103000 12935000 39205000 5670 1441 5155 49014;49015;49016;49017;49018;49019;49020;49021;49022;49023;49024;49025 38747;38748;38749;38750;38751;38752;38753;38754;38755 38752 9 AVPTDEAR Unmodified 857.4243 0.42429566 2593 Q15907;P62491 RAB11B;RAB11A Ras-related protein Rab-11B;Ras-related protein Rab-11A yes no 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 2 1 2 1 1 2 1 10.211 10.333 2 0.0068442 10180 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 94.262 55.043 238270000 0 0 0 4545200 2744900 4504500 4185300 64525000 3178900 75750000 62086000 5373200 6179900 5199000 0 5671 2593 5156 49026;49027;49028;49029;49030;49031;49032;49033;49034;49035;49036;49037;49038;49039 38756;38757;38758;38759;38760 38757 5 AVPTDEARAFAEK Unmodified 1403.7045 0.70449327 2593 Q15907;P62491 RAB11B;RAB11A Ras-related protein Rab-11B;Ras-related protein Rab-11A yes no 0 0 1 By MS/MS By MS/MS 2.5 0.5 2 2 3 1 49.921 45.061 2;3 0.0026005 55932 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 75.819 56.543 107750000 0 93318000 14427000 0 0 0 0 0 0 0 0 0 0 0 0 5672 2593 5157 49040;49041;49042;49043 38761;38762;38763;38764 38762 0 AVPTGDASK Unmodified 844.42905 0.42904669 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 8.257 4.8139 2 0.029348 7267 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.169 28.363 29735000 12511000 17223000 0 0 0 0 0 0 0 0 0 0 0 0 0 5673 1124 5158 49044;49045 38765 38765 1 AVPTVAGAR Unmodified 840.48175 0.48175096 3627 Q92570 NR4A3 Nuclear receptor subfamily 4 group A member 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 24.632 24.891 2 0.029484 25197 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.561 21.599 28677000 0 0 0 0 1367100 2029400 2621300 0 0 3172100 2531400 4065000 3845100 3685300 5360000 5674 3627 5159 49046;49047;49048;49049;49050;49051;49052;49053;49054 38766;38767;38768;38769 38768 4 AVPVESPVQK Unmodified 1052.5866 0.58660996 3478 Q8TB61 SLC35B2 Adenosine 3'-phospho 5'-phosphosulfate transporter 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 34.658 35.102 2 0.0026435 38984 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 81.548 62.071 25773000 0 0 0 0 0 6141200 0 0 0 0 0 5934800 0 6829200 6868000 5675 3478 5160 49055;49056;49057;49058 38770;38771;38772;38773;38774 38771 5 AVPVGGTTVSLFGK Unmodified 1331.7449 0.74490152 3422 Q8NEB9 PIK3C3 Phosphatidylinositol 3-kinase catalytic subunit type 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 78.094 77.065 2 0.00039217 89073 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 72.531 61.702 195810000 22909000 52380000 0 4849700 6812200 12473000 7699100 6939900 4984000 13371000 11561000 12066000 8032900 10314000 21413000 5676 3422 5161 49059;49060;49061;49062;49063;49064;49065;49066;49067;49068;49069;49070;49071;49072;49073 38775;38776;38777;38778;38779;38780;38781;38782;38783;38784;38785;38786;38787 38777 13 AVPVPNMTPSGVGR Unmodified 1380.7184 0.71836919 2940 Q6P996 PDXDC1 Pyridoxal-dependent decarboxylase domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.427 63.52 2 0.0011893 72897 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 65.5 55.795 348070000 0 0 0 18587000 17003000 29260000 24111000 22258000 15430000 29576000 38636000 40672000 30731000 34055000 47753000 5677 2940 5162 49074;49075;49076;49077;49078;49079;49080;49081;49082;49083;49084;49085 38788;38789;38790;38791;38792;38793;38794;38795;38796 38796 9 AVPVPNMTPSGVGR Oxidation (M) 1396.7133 0.71328381 2940 Q6P996 PDXDC1 Pyridoxal-dependent decarboxylase domain-containing protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 45.851 45.964 2 0.00039531 50415 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.842 36.755 241840000 0 0 0 19052000 15557000 0 32065000 18636000 0 0 40033000 0 52762000 26530000 37209000 5678 2940 5162 49086;49087;49088;49089;49090;49091;49092;49093 38797;38798;38799;38800;38801;38802;38803;38804 38798 4573 8 AVPYPQR Unmodified 829.44464 0.44463717 61 CON__P02666 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.45 24.654 2 0.024225 26515 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 83.229 46.642 + 833090000 0 0 0 82124000 107940000 140020000 72715000 62921000 31110000 40773000 80885000 73156000 52786000 36770000 51883000 5679 61 5163 49094;49095;49096;49097;49098;49099;49100;49101;49102;49103;49104;49105 38805;38806;38807;38808 38808 4 AVQADGQVK Unmodified 914.48214 0.48214489 3549 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 6 4 2 2 1 1 1 1 8.7109 7.0396 2 0.01196 10296 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.498 7.2153 77291000 37008000 36454000 0 0 0 0 0 0 2328500 1500800 0 0 0 0 0 5680 3549 5164 49106;49107;49108;49109 38809;38810;38811 38811 3 AVQAQGGESQQEAQR Unmodified 1585.7445 0.7444606 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 1 2 2 1 2 2 2 2 9.3487 9.4714 2;3 3.6673E-97 6204 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 191.53 183.3 127210000 0 0 0 11863000 8614500 10070000 10259000 5049500 4366500 8048800 16701000 16704000 11327000 8741500 15464000 5681 2459 5165 49110;49111;49112;49113;49114;49115;49116;49117;49118;49119;49120;49121;49122;49123;49124;49125;49126;49127;49128;49129;49130;49131 38812;38813;38814;38815;38816;38817;38818;38819;38820;38821;38822;38823;38824;38825;38826 38819 15 AVQCLNTSSK Unmodified 1106.539 0.53900784 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 By MS/MS 2 0 1 1 17.426 14.006 2 0.0061306 18443 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.783 65.797 4329700 0 4329700 0 0 0 0 0 0 0 0 0 0 0 0 0 5682 2775 5166 49132 38827 38827 1 AVQEIMQEK Oxidation (M) 1090.5329 0.53285983 1134 P22102 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 16.295 15.65 2 0.0012326 21191 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 136.8 57.328 480820000 21654000 209980000 0 9455200 4899600 19221000 12395000 7398100 7178200 17257000 28426000 44179000 18821000 26689000 53268000 5683 1134 5167 49133;49134;49135;49136;49137;49138;49139;49140;49141;49142;49143;49144;49145;49146;49147 38828;38829;38830;38831;38832;38833;38834;38835;38836;38837;38838;38839;38840;38841;38842;38843 38839 1621 14 AVQEIMQEK Unmodified 1074.5379 0.53794521 1134 P22102 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.83 3.5 4 1 13 1 3 1 1 2 1 1 1 1 1 1 1 1 1 1 33.734 32.487 1;2 1.698E-06 41310 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 164.72 89.535 2268500000 44326000 1729800000 4351400 27123000 53873000 43592000 23611000 25216000 20178000 41211000 43518000 47262000 32699000 37844000 93930000 5684 1134 5167 49148;49149;49150;49151;49152;49153;49154;49155;49156;49157;49158;49159;49160;49161;49162;49163;49164;49165 38844;38845;38846;38847;38848;38849;38850;38851;38852;38853;38854;38855;38856;38857;38858;38859;38860;38861;38862;38863 38846 19 AVQELVHPVVDR Unmodified 1360.7463 0.7462985 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 50.457 50.462 2;3 0.0017414 57618 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 52.555 37.183 122540000 0 0 0 0 22085000 0 0 58747000 15463000 0 0 0 0 26245000 0 5685 19 5168 49166;49167;49168;49169;49170 38864;38865;38866;38867 38867 4 AVQFFVQALR Unmodified 1177.6608 0.66077796 4035 Q99615 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 83.033 83.185 2 0.0015425 95841 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 121.62 100.75 92001000 0 0 0 0 0 0 4124600 5208200 6230400 9503000 8137900 13909000 5055700 8405600 31427000 5686 4035 5169 49171;49172;49173;49174;49175;49176;49177;49178;49179 38868;38869;38870;38871;38872;38873;38874 38869 7 AVQFGTGELCDAISAVEEK Unmodified 2022.9568 0.95682114 3813 Q96EK5 KIAA1279 KIF1-binding protein yes yes 0 0 0 By MS/MS By MS/MS 4 3.03 2 2 1 4 1 90.6 87.38 2;3 4.4989E-77 108450 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 204.28 192.01 145150000 0 142400000 0 0 0 0 0 0 0 0 0 0 0 0 2749100 5687 3813 5170 49180;49181;49182;49183;49184 38875;38876;38877;38878 38875 4 AVQFTEEK Unmodified 950.47091 0.4709115 4592;5139 Q9Y371;Q9NR46 SH3GLB1;SH3GLB2 Endophilin-B1;Endophilin-B2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.56 1.83 1 17 1 2 1 1 1 2 1 2 1 2 1 1 2 25.871 25.844 2 0.0044044 27976 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 110.81 36.472 1731700000 0 51721000 0 96359000 100280000 111780000 97666000 150110000 80075000 166150000 129210000 214960000 262400000 126760000 144190000 5688 5139;4592 5171 49185;49186;49187;49188;49189;49190;49191;49192;49193;49194;49195;49196;49197;49198;49199;49200;49201;49202 38879;38880;38881;38882;38883;38884;38885;38886;38887;38888;38889;38890;38891;38892;38893;38894;38895;38896 38879 17 AVQGAQQPSLYQIR Unmodified 1557.8263 0.82633974 2228 Q13045 FLII Protein flightless-1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 57.695 57.755 2 2.3307E-22 65512 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 181.44 158.8 145380000 0 0 0 17242000 15526000 15708000 15969000 12801000 0 0 18627000 0 15851000 16223000 17438000 5689 2228 5172 49203;49204;49205;49206;49207;49208;49209;49210;49211;49212;49213;49214 38897;38898;38899;38900;38901;38902;38903;38904;38905;38906;38907;38908 38901 12 AVQGFFTSNNATR Unmodified 1411.6844 0.68442653 308 O43242 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 53.803 53.94 2 2.178E-13 61048 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 169.65 145.62 636520000 0 0 0 44632000 48320000 60885000 20431000 23348000 16744000 86899000 112710000 133120000 15136000 27054000 47250000 5690 308 5173 49215;49216;49217;49218;49219;49220;49221;49222;49223;49224;49225;49226 38909;38910;38911;38912;38913;38914;38915;38916;38917;38918;38919;38920;38921 38911 13 AVQGFHTGVHQAGK Unmodified 1435.732 0.73204542 2981 Q6UWP8 SBSN Suprabasin yes yes 0 0 0 By MS/MS 10 0 1 1 18.323 18.182 3 0.011554 18419 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 36.292 27.403 10393000 0 0 0 10393000 0 0 0 0 0 0 0 0 0 0 0 5691 2981 5174 49227 38922 38922 1 AVQGGGATPVVGAVQGPVPGMPPMTQAPR 2 Oxidation (M) 2758.3895 0.38945384 877 P09012 SNRPA U1 small nuclear ribonucleoprotein A yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 72.02 72.035 3 6.4355E-73 82859 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 111.5 105.97 527630000 0 0 0 49234000 66745000 59582000 0 45956000 65943000 78266000 0 94801000 0 0 67100000 5692 877 5175 49228;49229;49230;49231;49232;49233;49234;49235 38923;38924;38925;38926;38927;38928;38929;38930;38931 38925 1128;1129 9 AVQGGGATPVVGAVQGPVPGMPPMTQAPR Unmodified 2726.3996 0.39962459 877 P09012 SNRPA U1 small nuclear ribonucleoprotein A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 83.083 83.116 3 2.8664E-37 96072 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.659 82.706 143490000 0 0 0 3736200 0 11735000 0 0 11441000 0 0 0 12539000 23194000 80848000 5693 877 5175 49236;49237;49238;49239;49240;49241 38932;38933;38934;38935;38936;38937 38934 6 AVQGGGATPVVGAVQGPVPGMPPMTQAPR Oxidation (M) 2742.3945 0.39453922 877 P09012 SNRPA U1 small nuclear ribonucleoprotein A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 2 2 1 1 77.422 77.508 3 2.1656E-12 88316 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 49.486 46.206 94082000 0 0 0 5224400 0 0 14525000 0 0 0 0 34829000 0 15417000 24086000 5694 877 5175 49242;49243;49244;49245;49246;49247;49248 38938;38939;38940;38941 38938 1128;1129 4 AVQGMLDFDYVCSR Oxidation (M) 1675.7334 0.73342691 1714 P53396 ACLY ATP-citrate synthase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 73.896 74.065 2 7.749E-12 84715 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 100.55 93.894 27889000 0 0 0 0 0 0 5292000 8619000 13978000 0 0 0 0 0 0 5695 1714 5176 49249;49250;49251 38942;38943;38944;38945 38943 2772 4 AVQLTQAMDTSTVGVLLAAK Unmodified 2016.0925 0.092526762 614 O94979 SEC31A Protein transport protein Sec31A yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 93.95 90.27 2 6.4975E-05 112049 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 63.29 43.452 15156000 0 14491000 665840 0 0 0 0 0 0 0 0 0 0 0 0 5696 614 5177 49252;49253 38946 38946 1 AVQLTTNDAIK Unmodified 1172.6401 0.6401021 4844 Q9UBK8 MTRR Methionine synthase reductase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.9 3.81 3 1 6 1 2 1 1 1 1 1 1 1 46.517 43.481 2 0.00026662 48134 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 92.051 42.991 382160000 20668000 318930000 1779700 0 0 9729100 0 0 0 0 0 0 0 11468000 19591000 5697 4844 5178 49254;49255;49256;49257;49258;49259;49260;49261;49262;49263 38947;38948;38949;38950;38951;38952;38953;38954;38955;38956;38957;38958 38952 12 AVQNQWQLQQEK Unmodified 1498.7528 0.75284044 629 O95229 ZWINT ZW10 interactor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 43.83 43.929 2 3.2033E-27 48137 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 170.68 149.31 94901000 0 0 0 5908200 7364300 7760300 7917700 5654100 5563300 9820600 21362000 0 0 6869800 16681000 5698 629 5179 49264;49265;49266;49267;49268;49269;49270;49271;49272;49273;49274 38959;38960;38961;38962;38963;38964;38965;38966;38967;38968;38969 38962 11 AVQPTSGEPR Unmodified 1040.5251 0.52507234 5201 Q9Y4G6 TLN2 Talin-2 yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 13.073 13.292 2 0.009388 11986 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.859 24.343 18281000 0 0 0 0 0 1699600 1206200 1160800 1162300 3128200 2423200 2808900 0 1389300 3302700 5699 5201 5180 49275;49276;49277;49278;49279;49280;49281;49282;49283 38970 38970 1 AVQRLEEQLMK Unmodified 1343.7231 0.72312022 945 P11387 TOP1 DNA topoisomerase 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 58.803 51.775 3 0.012906 70008 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.188 21.481 60014000 46205000 13809000 0 0 0 0 0 0 0 0 0 0 0 0 0 5700 945 5181 49284;49285 38971 38971 1 AVQSGHVNLK Unmodified 1051.5774 0.57744226 2547 Q15545 TAF7 Transcription initiation factor TFIID subunit 7 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching 10 0 8 1 1 1 1 1 1 1 1 14.673 14.841 2 0.036532 13924 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 66.073 18.991 24581000 0 0 0 0 1240100 2110700 1639900 0 0 3240300 5066800 0 3718000 2187900 5377000 5701 2547 5182 49286;49287;49288;49289;49290;49291;49292;49293 38972 38972 0 AVQSLDK Unmodified 759.41267 0.41266834 289 O15511 ARPC5 Actin-related protein 2/3 complex subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 11.518 8.3015 2 0.027727 11568 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.068 17.614 473330000 36977000 433660000 2687400 0 0 0 0 0 0 0 0 0 0 0 0 5702 289 5183 49294;49295;49296;49297 38973;38974 38973 2 AVQSRLTGEEVNSCVEVLLEEAK Unmodified 2559.285 0.28503157 1579 P49589 CARS Cysteine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS 2 0 1 1 92.258 84.128 3 8.6623E-38 109026 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.54 89.514 15434000 15434000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5703 1579 5184 49298 38975 38975 1 AVQSTINHVK Unmodified 1095.6037 0.60365701 3924 Q96MF7 NSMCE2 E3 SUMO-protein ligase NSE2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.12 3 13 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 15.685 15.097 2 0.00022463 20017 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 119.27 70.771 656190000 82258000 74443000 10018000 76301000 7415100 10139000 16468000 68411000 9375200 50826000 39025000 32824000 115780000 27027000 35879000 5704 3924 5185 49299;49300;49301;49302;49303;49304;49305;49306;49307;49308;49309;49310;49311;49312;49313;49314 38976;38977;38978;38979;38980;38981;38982;38983;38984;38985;38986;38987;38988;38989;38990;38991 38985 14 AVQTSIATAYR Unmodified 1179.6248 0.62478638 2491 Q15057 ACAP2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS By matching 10 0 6 1 1 1 1 1 1 43.158 43.474 2 0.042405 47669 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 46.819 16.634 20943000 0 0 0 0 0 0 2917700 2519100 0 0 0 0 3450000 3397100 8659500 5705 2491 5186 49315;49316;49317;49318;49319;49320 38992;38993 38993 2 AVQTSIATAYREK Unmodified 1436.7623 0.7623425 2491 Q15057 ACAP2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 43.741 37.942 2;3 0.0016998 51835 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.793 76.347 92959000 88001000 0 4957500 0 0 0 0 0 0 0 0 0 0 0 0 5706 2491 5187 49321;49322;49323 38994;38995 38994 1 AVQVHQDTLR Unmodified 1165.6204 0.62036971 4977 Q9UKV8;Q9UL18 AGO2;AGO1 Protein argonaute-2;Protein argonaute-1 yes no 0 0 0 By MS/MS 10 0 1 1 20.816 20.663 3 0.043552 21462 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 40.715 29.809 12595000 0 0 0 12595000 0 0 0 0 0 0 0 0 0 0 0 5707 4977 5188 49324 38996 38996 0 AVQVIGNQTLK Unmodified 1169.6768 0.67682195 2792 Q5TAX3 ZCCHC11 Terminal uridylyltransferase 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.598 46.765 2 0.00045845 52510 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 84.615 40.22 93938000 0 0 0 4832700 4365800 7198000 7103000 5606400 7123300 9304100 10039000 9697000 7988900 7277300 13402000 5708 2792 5189 49325;49326;49327;49328;49329;49330;49331;49332;49333;49334;49335;49336 38997;38998;38999;39000;39001;39002;39003 39003 7 AVQVVLR Unmodified 783.49667 0.49667274 3316 Q8N2W9 PIAS4 E3 SUMO-protein ligase PIAS4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 39.811 39.994 2 0.025274 43012 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.1 16.824 49260000 0 0 0 2754500 3165300 3783900 3046200 3561000 0 5426000 3961100 8000900 6559100 3935300 5066800 5709 3316 5190 49337;49338;49339;49340;49341;49342;49343;49344;49345;49346;49347 39004;39005;39006;39007 39005 4 AVQYLSSQDEK Unmodified 1266.6092 0.6091959 2346 Q13835 PKP1 Plakophilin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.303 30.492 2 6.109E-29 32904 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 177.7 142.26 304520000 0 0 0 45310000 11563000 13110000 19374000 120110000 13027000 10914000 17144000 12825000 23687000 9042500 8410300 5710 2346 5191 49348;49349;49350;49351;49352;49353;49354;49355;49356;49357;49358;49359 39008;39009;39010;39011;39012;39013;39014;39015;39016;39017;39018;39019 39014 12 AVRAHMESDK Unmodified 1142.5502 0.55024123 1707 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 0 0 1 By MS/MS 2 0 1 1 7.195 3.6799 3 0.007637 6855 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.19 45.49 110380000 110380000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5711 1707 5192 49360 39020 39020 1 AVRASFENNCEIGCFAK Acetyl (Protein N-term) 2013.9037 0.90368013 1785 P56537 EIF6 Eukaryotic translation initiation factor 6 yes yes 1 0 1 By MS/MS By MS/MS 2 0 2 1 1 79.447 74.067 2;3 8.3924E-05 95171 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.756 72.85 21839000 17451000 0 4387700 0 0 0 0 0 0 0 0 0 0 0 0 5712 1785 5193 49361;49362 39021;39022 39021 2 AVSAVLESDPYFGFEEAK Unmodified 1957.9309 0.93092397 4666 Q9NVE7 PANK4 Pantothenate kinase 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.9 3.81 3 1 6 1 2 1 1 2 2 1 87.262 85.341 2;3 9.6494E-81 106228 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 188.48 176.95 245110000 5858800 145890000 1851900 5874300 46468000 36302000 0 0 2872500 0 0 0 0 0 0 5713 4666 5194 49363;49364;49365;49366;49367;49368;49369;49370;49371;49372 39023;39024;39025;39026;39027;39028;39029;39030 39024 8 AVSDQLK Unmodified 759.41267 0.41266834 2411 Q14527 HLTF Helicase-like transcription factor yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.901 14.064 2 0.025588 13340 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 80.462 23.127 304860000 0 0 0 18845000 22454000 22729000 22245000 20801000 17324000 29657000 45950000 26600000 28450000 19546000 30258000 5714 2411 5195 49373;49374;49375;49376;49377;49378;49379;49380;49381;49382;49383;49384 39031;39032 39031 2 AVSDWIDEQEK Unmodified 1318.6041 0.60411052 2207 Q12906 ILF3 Interleukin enhancer-binding factor 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58.421 57.51 2 0.00049645 65370 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 83.358 77.205 444540000 18367000 34668000 0 25155000 21417000 28236000 20557000 18419000 23083000 47033000 32534000 48129000 39547000 37413000 49988000 5715 2207 5196 49385;49386;49387;49388;49389;49390;49391;49392;49393;49394;49395;49396;49397;49398 39033;39034;39035;39036;39037;39038;39039;39040 39037 6 AVSEEQQPALK Unmodified 1198.6194 0.61936665 3421 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25.677 25.142 2 4.3175E-13 26621 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 167.33 134.49 471790000 24140000 51202000 0 27459000 24030000 26615000 31635000 23281000 34662000 32747000 33886000 38998000 30188000 34607000 58340000 5716 3421 5197 49399;49400;49401;49402;49403;49404;49405;49406;49407;49408;49409;49410;49411;49412 39041;39042;39043;39044;39045;39046;39047;39048;39049;39050;39051;39052;39053;39054;39055 39049 14 AVSEGNLLLLHEALAK Unmodified 1676.9461 0.94612052 2743 Q5JVF3 PCID2 PCI domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 81.357 81.525 3 0.00047752 93991 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.671 46.755 34084000 0 0 0 0 0 0 0 5265800 0 8909200 0 0 0 0 19909000 5717 2743 5198 49413;49414;49415 39056;39057;39058 39057 3 AVSEMSTEIGTMISVSSAEYGTNAK Unmodified 2562.1829 0.18293427 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 0 By MS/MS 2 0 1 1 92.261 84.13 3 0.0046236 109162 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 28.665 21.472 6610500 6610500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5718 5216 5199 49416 39059 39059 1 AVSERIVHDYK Unmodified 1315.6884 0.68844927 2171 Q09472 EP300 Histone acetyltransferase p300 yes yes 0 0 1 By MS/MS 2 0 1 1 33.736 27.504 3 0.019471 38852 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.071 18.983 30193000 30193000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5719 2171 5200 49417 39060 39060 0 AVSESQLK Acetyl (Protein N-term) 902.47091 0.4709115 4063 Q99816 TSG101 Tumor susceptibility gene 101 protein yes yes 1 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching 7 4.24 2 4 1 1 1 1 1 1 58.246 59.647 1;2 0.008338 39572 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 47.849 25.717 34939000 5120100 8305800 0 0 0 0 0 0 0 0 3314500 5263500 0 2762200 10173000 5720 4063 5201 49418;49419;49420;49421;49422;49423 39061;39062;39063;39064 39064 4 AVSGAIVAQR Unmodified 970.55598 0.55597854 4495 Q9HB21 PLEKHA1 Pleckstrin homology domain-containing family A member 1 yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 28.857 29.061 2 0.011171 30351 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.712 8.2867 12063000 0 0 0 0 2534600 0 0 0 0 0 0 0 0 3555800 5972400 5721 4495 5202 49424;49425;49426 39065 39065 1 AVSIIECDMNVDFDAPLGYK Oxidation (M) 2272.0392 0.039170562 3681 Q92890 UFD1L Ubiquitin fusion degradation protein 1 homolog yes yes 0 1 0 By MS/MS 2 0 1 1 89.304 84.431 2 5.4441E-54 104970 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.24 101.63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5722 3681 5203 49427 39066 39066 5231 1 AVSIIECDMNVDFDAPLGYK Unmodified 2256.0443 0.04425594 3681 Q92890 UFD1L Ubiquitin fusion degradation protein 1 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 94.765 86.635 2 1.0068E-85 112099 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 155.42 147.87 9373000 9373000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5723 3681 5203 49428 39067 39067 1 AVSILGDEVFR Unmodified 1204.6452 0.64518747 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.953 81.013 2 9.9601E-05 93644 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 110.76 29.208 212530000 0 0 0 8421500 14523000 17165000 11116000 20963000 12650000 21919000 17603000 26624000 15365000 19789000 26393000 5724 3023 5204 49429;49430;49431;49432;49433;49434;49435;49436;49437;49438;49439;49440 39068;39069;39070;39071;39072;39073;39074;39075;39076;39077;39078;39079;39080;39081;39082;39083;39084 39070 17 AVSIMGNEVFR Unmodified 1221.6176 0.61759251 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching 10 0 5 1 1 1 1 1 74.991 75.004 2 0.013282 86370 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 56.729 35.281 23270000 0 0 0 0 5244600 4259400 3794900 6250700 0 0 0 0 3720100 0 0 5725 3023 5205 49441;49442;49443;49444;49445 39085;39086 39086 2 AVSIMGNEVFR Oxidation (M) 1237.6125 0.61250714 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 1 0 By MS/MS 10 0 1 1 58.76 59.28 2 0.030688 67342 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 50.978 29.383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5726 3023 5205 49446 39087 39087 1 AVSISTEPPTYLR Unmodified 1432.7562 0.75619449 2194 Q12824 SMARCB1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.944 69.023 2 1.3184E-05 79146 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 97.456 86.933 416620000 0 0 0 25029000 21377000 30181000 30626000 24750000 23184000 38251000 47849000 42855000 27827000 35335000 69352000 5727 2194 5206 49447;49448;49449;49450;49451;49452;49453;49454;49455;49456;49457;49458 39088;39089;39090;39091;39092;39093;39094;39095;39096;39097;39098 39089 11 AVSISTEPPTYLREQK Unmodified 1817.9523 0.95232811 2194 Q12824 SMARCB1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 66.214 60.224 3 0.0047338 74751 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 49.595 43.563 120820000 21668000 50601000 48555000 0 0 0 0 0 0 0 0 0 0 0 0 5728 2194 5207 49459;49460;49461 39099 39099 1 AVSLDSPVSVGSSPPVK Unmodified 1624.8672 0.8672015 5292 Q9Y6Q9 NCOA3 Nuclear receptor coactivator 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.635 69.71 2 1.1489E-13 80039 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 91.914 74.889 104250000 0 0 0 5007800 6807800 7212600 8273700 8561400 5694200 10307000 12107000 9423500 8593500 8890900 13372000 5729 5292 5208 49462;49463;49464;49465;49466;49467;49468;49469;49470;49471;49472;49473 39100;39101;39102;39103;39104;39105;39106;39107;39108;39109;39110;39111 39101 12 AVSNEIVRFPTDQLTPDQER Unmodified 2314.1553 0.15533803 802 P05164 MPO Myeloperoxidase;Myeloperoxidase;89 kDa myeloperoxidase;84 kDa myeloperoxidase;Myeloperoxidase light chain;Myeloperoxidase heavy chain yes yes 0 0 1 By MS/MS 10 0 1 1 76.236 76.322 3 0.00015916 88384 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 49.768 41.481 5521100 0 0 0 0 0 0 0 0 0 0 0 0 5521100 0 0 5730 802 5209 49474 39112 39112 1 AVSNINTLLDK Unmodified 1186.6558 0.65575216 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 By MS/MS 10 0 1 1 64.403 64.565 2 0.043237 73635 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 50.297 24.56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5731 2775 5210 49475 39113 39113 1 AVSQIVTVYDK Unmodified 1221.6605 0.66050319 2816 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.634 56.757 2 0.00053995 64569 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 96.342 38.752 236960000 0 0 0 9926600 15999000 17625000 19288000 15361000 15957000 18212000 24541000 24050000 28747000 15167000 32084000 5732 2816 5211 49476;49477;49478;49479;49480;49481;49482;49483;49484;49485;49486;49487 39114;39115;39116;39117;39118;39119;39120;39121;39122;39123;39124;39125;39126;39127;39128 39114 15 AVSRSAEQQPSEK Unmodified 1415.7005 0.70047052 1113 P20810 CAST Calpastatin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 2 3 2 7.5904 4.5786 2;3 8.7314E-64 6475 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 211.46 172.44 722730000 132840000 309300000 280600000 0 0 0 0 0 0 0 0 0 0 0 0 5733 1113 5212 49488;49489;49490;49491;49492;49493;49494 39129;39130;39131;39132;39133;39134;39135;39136;39137 39136 8 AVSSADPRAPGESPCPVGEPPLALENAASLK Unmodified 3086.5343 0.5342634 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 7.44 3.62 2 1 6 2 1 1 1 1 1 1 1 80.995 79.924 3 1.8625E-12 99262 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.675 55.115 80696000 0 56940000 1921600 0 0 0 0 3589300 0 2815000 0 2953600 2491500 2389800 7595900 5734 645 5213 49495;49496;49497;49498;49499;49500;49501;49502;49503 39138;39139;39140 39138 3 AVSSNISQK Unmodified 932.49271 0.49270958 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 9.1576 9.3216 2 0.011616 7963 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 62.546 18.151 57474000 0 0 0 6160800 7119800 0 0 0 4526800 4467200 9602200 8064100 7159200 5088500 5285200 5735 3023 5214 49504;49505;49506;49507;49508;49509;49510;49511;49512 39141;39142;39143;39144;39145;39146 39144 6 AVSSQMIGK Unmodified 919.4797 0.47970205 4827 Q9P2R7 SUCLA2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 27.972 23.667 2 0.017502 31074 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.77 46.628 40700000 0 40700000 0 0 0 0 0 0 0 0 0 0 0 0 0 5736 4827 5215 49513 39147 39147 1 AVSTGDCGQVLR Unmodified 1261.6085 0.60848439 2958 Q6PJG2 ELMSAN1 ELM2 and SANT domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.521 31.707 2 0.00028841 34469 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 82.749 59.321 79024000 0 0 0 4908700 9616000 8977700 5096600 4352400 5467900 8502300 7310900 8841500 4015500 4387500 7547200 5737 2958 5216 49514;49515;49516;49517;49518;49519;49520;49521;49522;49523;49524;49525 39148;39149;39150;39151;39152;39153;39154;39155;39156;39157 39151 10 AVSTGVK Acetyl (Protein N-term) 702.3912 0.39120462 2585 Q15819 UBE2V2 Ubiquitin-conjugating enzyme E2 variant 2 yes yes 1 0 0 By MS/MS 3 0 1 1 23.247 19.284 1 0.018271 23998 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 119.57 52.572 6859000 0 6859000 0 0 0 0 0 0 0 0 0 0 0 0 0 5738 2585 5217 49526 39158 39158 0 AVSTLIDSLK Unmodified 1045.6019 0.60192568 3087 Q7Z3U7 MON2 Protein MON2 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 78.425 73.681 2 0.0030629 92851 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.233 52.553 195870000 6328500 183200000 6349300 0 0 0 0 0 0 0 0 0 0 0 0 5739 3087 5218 49527;49528;49529;49530 39159;39160;39161;39162 39159 4 AVSTVVVTTAPSPK Unmodified 1355.766 0.76603089 2935 Q6P4R8 NFRKB Nuclear factor related to kappa-B-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 50.997 49.443 2 4.2409E-20 55640 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 123.67 76.068 38917000 0 12407000 0 4293100 0 0 14611000 0 7605700 0 0 0 0 0 0 5740 2935 5219 49531;49532;49533;49534;49535;49536;49537;49538;49539;49540;49541 39163;39164;39165;39166;39167;39168;39169;39170;39171;39172;39173 39171 11 AVSVNEGYK Unmodified 965.48181 0.48181054 4292 Q9C0I1 MTMR12 Myotubularin-related protein 12 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 23.913 22.137 2 0.0063105 28454 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.14 84.511 46958000 0 40284000 0 0 0 0 0 0 0 0 0 0 0 0 6674600 5741 4292 5220 49542;49543 39174;39175 39174 2 AVSVTPIR Acetyl (Protein N-term) 883.51272 0.51271674 4594 Q9NR56 MBNL1 Muscleblind-like protein 1 yes yes 1 0 0 By MS/MS 10 0 1 1 62.171 62.334 2 0.015399 70976 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 47.743 7.1703 4404700 0 0 0 0 0 0 0 0 4404700 0 0 0 0 0 0 5742 4594 5221 49544 39176 39176 1 AVSVTPIRDTK Acetyl (Protein N-term) 1227.6823 0.68230126 4594 Q9NR56 MBNL1 Muscleblind-like protein 1 yes yes 1 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 51.338 50.029 2 9.2537E-21 57593 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 167.67 111.24 3045000000 29259000 365060000 6864200 164000000 153640000 201180000 225690000 146040000 199810000 190220000 287710000 277520000 202460000 200860000 394710000 5743 4594 5222 49545;49546;49547;49548;49549;49550;49551;49552;49553;49554;49555;49556;49557;49558;49559;49560 39177;39178;39179;39180;39181;39182;39183;39184;39185;39186;39187;39188;39189;39190;39191;39192;39193;39194;39195;39196;39197;39198;39199;39200;39201;39202;39203 39203 25 AVTAFSSTETGSAEQGFK Unmodified 1816.8479 0.84792262 2736 Q5JSZ5 PRRC2B Protein PRRC2B yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 57 57.298 2 5.537E-05 65061 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 84.718 44.801 26977000 0 0 0 0 0 0 4532500 0 0 3493200 5230600 0 7452700 0 6268000 5744 2736 5223 49561;49562;49563;49564;49565 39204;39205;39206;39207 39205 4 AVTAMGILNTIDTLLSVVEDHK Unmodified 2339.2406 0.24064756 649 O95373 IPO7 Importin-7 yes yes 0 0 0 By MS/MS 3 0 1 1 106.48 102.81 3 3.4286E-32 123616 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 94.885 86.698 3875500 0 3875500 0 0 0 0 0 0 0 0 0 0 0 0 0 5745 649 5224 49566 39208 39208 1 AVTDPQGVGTPEMIPLDWEK Oxidation (M) 2198.0565 0.056535186 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 1 0 By MS/MS 2 0 1 1 86.582 81.774 2 5.4115E-37 101662 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.54 110.63 26371000 0 26371000 0 0 0 0 0 0 0 0 0 0 0 0 0 5746 2193 5225 49567 39209 39209 3557 1 AVTDPQGVGTPEMIPLDWEK Unmodified 2182.0616 0.061620564 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 0 0 By MS/MS 2 0 1 1 92.857 87.946 2 3.7378E-23 109144 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.55 97.222 74190000 0 74190000 0 0 0 0 0 0 0 0 0 0 0 0 0 5747 2193 5225 49568 39210 39210 1 AVTDQTVSK Unmodified 947.49238 0.49237523 1397 P38432 COIL Coilin yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 10.337 10.471 2 0.013227 8963 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.118 19.546 8865400 0 0 0 0 1904500 0 0 0 0 0 0 4343300 0 2617600 0 5748 1397 5226 49569;49570;49571 39211;39212 39211 2 AVTDTHENGDLGTASETPLDDGASK Unmodified 2500.1201 0.12013431 4525 Q9HD26 GOPC Golgi-associated PDZ and coiled-coil motif-containing protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 4.83 3.67 3 1 2 1 3 1 1 51.526 47.603 2;3 1.5236E-78 61200 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.25 130.98 272320000 10319000 243030000 0 0 0 0 0 0 0 0 0 0 5821300 0 13147000 5749 4525 5227 49572;49573;49574;49575;49576;49577 39213;39214;39215;39216;39217;39218;39219 39214 7 AVTELNEPLSNEDR Unmodified 1585.7584 0.75837933 2109 Q04917 YWHAH 14-3-3 protein eta yes yes 0 0 0 By MS/MS 10 0 1 1 50.065 50.776 2 2.5189E-06 56460 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.043 67.242 23739000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23739000 5750 2109 5228 49578 39220 39220 1 AVTELNEPLSNEDRNLLSVAYK Unmodified 2474.2653 0.26528241 2109 Q04917 YWHAH 14-3-3 protein eta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.9 3.81 3 1 6 1 2 1 1 1 1 1 1 1 82.893 81.127 3 3.6855E-154 93823 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 179.58 171.78 1560600000 107000000 1235100000 69205000 0 0 0 0 3889000 0 14478000 16393000 13570000 0 8750700 92270000 5751 2109 5229 49579;49580;49581;49582;49583;49584;49585;49586;49587;49588 39221;39222;39223;39224;39225;39226;39227;39228;39229;39230;39231;39232;39233;39234;39235;39236 39226 16 AVTEMNGR Unmodified 876.41235 0.41235077 958;2268 Q13310;P11940;Q9H361;Q4VXU2 PABPC4;PABPC1;PABPC3;PABPC1L Polyadenylate-binding protein 4;Polyadenylate-binding protein 1;Polyadenylate-binding protein 3;Polyadenylate-binding protein 1-like no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 10.566 10.703 2 0.0058382 9493 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 134.66 103.36 77210000 0 0 0 0 7316900 0 11313000 0 0 10784000 0 0 18627000 12992000 16177000 5752 2268;958 5230 49589;49590;49591;49592;49593;49594 39237;39238;39239;39240;39241;39242 39238 2 AVTEMNGRIVGSK Oxidation (M) 1376.7082 0.70819844 2268 Q13310 PABPC4 Polyadenylate-binding protein 4 yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 22.29 18.401 2 2.6908E-11 26248 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 120.77 91.684 17094000 15066000 0 2028200 0 0 0 0 0 0 0 0 0 0 0 0 5753 2268 5231 49595;49596 39243;39244 39243 3699 2 AVTEQGAELSNEER Unmodified 1531.7114 0.71142914 1214 P27348 YWHAQ 14-3-3 protein theta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.29 2.21 1 1 19 2 2 2 1 2 1 2 1 2 1 1 2 2 30.635 30.352 2;3 0 31827 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 264.17 243.97 1394300000 0 40674000 0 61336000 38836000 76914000 47065000 47324000 44315000 73331000 160700000 162280000 100110000 167680000 373770000 5754 1214 5232 49597;49598;49599;49600;49601;49602;49603;49604;49605;49606;49607;49608;49609;49610;49611;49612;49613;49614;49615;49616;49617 39245;39246;39247;39248;39249;39250;39251;39252;39253;39254;39255;39256;39257;39258;39259;39260 39249 15 AVTEQGAELSNEERNLLSVAYK Unmodified 2420.2183 0.21833222 1214 P27348 YWHAQ 14-3-3 protein theta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 4.2 3.51 10 1 4 1 7 3 1 1 1 1 85.15 82.271 2;3 6.9838E-86 93995 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 154.34 132.97 2331600000 190210000 1863500000 206570000 0 0 0 0 0 0 14427000 9536500 5064800 0 0 42334000 5755 1214 5233 49618;49619;49620;49621;49622;49623;49624;49625;49626;49627;49628;49629;49630;49631;49632 39261;39262;39263;39264;39265;39266;39267;39268;39269;39270;39271;39272;39273;39274;39275;39276;39277;39278;39279;39280 39271 20 AVTEQGHELSNEER Unmodified 1597.7332 0.73322721 1311 P31946 YWHAB 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.54 3 3 2 21 1 4 2 2 2 2 2 2 2 1 2 1 1 2 19.948 19.285 2;3 2.0717E-19 20036 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 121.02 106.15 1474300000 6722600 71371000 0 51123000 28172000 59517000 41246000 42533000 31430000 80018000 141870000 217350000 49759000 125520000 527620000 5756 1311 5234 49633;49634;49635;49636;49637;49638;49639;49640;49641;49642;49643;49644;49645;49646;49647;49648;49649;49650;49651;49652;49653;49654;49655;49656;49657;49658 39281;39282;39283;39284;39285;39286;39287;39288;39289;39290;39291;39292;39293;39294;39295;39296;39297;39298;39299;39300;39301;39302 39282 18 AVTEQGHELSNEERNLLSVAYK Unmodified 2486.2401 0.24013029 1311 P31946 YWHAB 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 4.57 3.46 3 2 2 2 2 1 2 77.874 74.737 3;4 9.0847E-102 94022 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 133.65 118.56 517910000 105260000 332000000 30265000 0 0 0 0 0 0 0 0 0 0 0 50386000 5757 1311 5235 49659;49660;49661;49662;49663;49664;49665 39303;39304;39305;39306;39307;39308;39309;39310 39304 8 AVTESSEQDMK Unmodified 1223.534 0.53398204 3418 Q8NDI1 EHBP1 EH domain-binding protein 1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS 10 0 4 1 1 1 1 13.561 13.672 2 0.024333 13090 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 41.117 34.667 8833200 0 0 0 0 0 2303500 0 1444500 1806200 3279000 0 0 0 0 0 5758 3418 5236 49666;49667;49668;49669 39311;39312 39312 2 AVTFSPDLGPVPHEGLGEYNR Unmodified 2254.1018 0.10184589 4801 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 2 2 2 78.766 78.878 3 2.3044E-06 91183 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 63.302 49.026 106730000 0 0 0 0 3438000 8229700 0 8796500 8669800 8773800 0 17206000 0 14271000 37342000 5759 4801 5237 49670;49671;49672;49673;49674;49675;49676;49677;49678;49679;49680 39313;39314;39315;39316;39317;39318;39319;39320 39313 6 AVTGQTTQVSPPVIAGR Unmodified 1680.9159 0.91588303 2893 Q6MZP7 LIN54 Protein lin-54 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 58.149 58.417 2 0.00013325 66752 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 68.171 54.58 52387000 0 0 0 0 0 4998800 4271800 4254600 0 6045600 7563800 8353900 4879700 4505200 7513100 5760 2893 5238 49681;49682;49683;49684;49685;49686;49687;49688;49689;49690 39321;39322;39323;39324;39325;39326;39327;39328;39329;39330 39329 9 AVTGTHTLALAAK Unmodified 1252.7139 0.71393574 1598 P49770 EIF2B2 Translation initiation factor eIF-2B subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 16 1 1 1 1 1 1 2 2 2 1 1 2 38.389 38.655 2;3 0.0096082 42824 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 30.875 8.829 133570000 0 0 0 5598700 5457300 11981000 6074600 8151100 5086400 11730000 16431000 19914000 9422600 9309200 24412000 5761 1598 5239 49691;49692;49693;49694;49695;49696;49697;49698;49699;49700;49701;49702;49703;49704;49705;49706 39331;39332;39333;39334;39335;39336 39336 3 AVTGYNDPETGNIISLFQAMNK Oxidation (M) 2398.1475 0.14747546 1029 P15924 DSP Desmoplakin yes yes 0 1 0 By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 19 1 2 1 2 2 1 2 2 2 1 1 2 90.012 90.097 2;3 1.3974E-17 104601 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 84.499 77.306 160920000 0 0 0 2433500 8511600 2454800 6084600 34911000 1664700 37334000 20305000 18820000 2152700 2442600 23808000 5762 1029 5240 49707;49708;49709;49710;49711;49712;49713;49714;49715;49716;49717;49718;49719;49720;49721;49722;49723;49724;49725 39337;39338;39339;39340;39341;39342;39343;39344 39341 1426 8 AVTGYTDPYTGQQISLFQAMQK Oxidation (M) 2462.1788 0.17877559 1802 P58107 EPPK1 Epiplakin yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 22 2 2 2 2 2 2 2 2 2 1 1 2 81.989 82.047 2;3 3.4476E-26 95135 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 91.889 90.427 297510000 0 0 0 12815000 17005000 26362000 13669000 35208000 18565000 49123000 37543000 41362000 3480400 3579000 38802000 5763 1802 5241 49726;49727;49728;49729;49730;49731;49732;49733;49734;49735;49736;49737;49738;49739;49740;49741;49742;49743;49744;49745;49746;49747 39345;39346;39347;39348;39349;39350;39351;39352;39353;39354;39355;39356;39357;39358 39356 2920 14 AVTHLNNVK Unmodified 994.55598 0.55597854 3567 Q8WVV9 HNRNPLL Heterogeneous nuclear ribonucleoprotein L-like yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13.108 12.758 2 0.0085848 11842 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 69.198 41.944 49307000 4635000 0 2409200 2375800 2222600 2957300 3368100 2791600 2740100 4641700 4672100 4497100 4405200 2448100 5143800 5764 3567 5242 49748;49749;49750;49751;49752;49753;49754;49755;49756;49757;49758;49759;49760;49761 39359;39360;39361;39362;39363;39364;39365;39366 39360 8 AVTIANSPSK Unmodified 986.53966 0.53965977 3424 Q8NEF9 SRFBP1 Serum response factor-binding protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 21.406 21.387 2 0.038928 22167 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 40.386 4.5061 29614000 0 0 0 0 0 29614000 0 0 0 0 0 0 0 0 0 5765 3424 5243 49762 39367 39367 1 AVTIANSPSKPSEK Unmodified 1427.762 0.76200815 3424 Q8NEF9 SRFBP1 Serum response factor-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.466 22.672 3 0.0023647 23980 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 40.941 30.948 57665000 0 0 0 5053900 3422800 2487900 3872100 3208200 2297800 7659300 8563600 9169900 4351600 3373000 4205100 5766 3424 5244 49763;49764;49765;49766;49767;49768;49769;49770;49771;49772;49773;49774 39368;39369;39370;39371;39372 39371 5 AVTIFIR Unmodified 818.50142 0.50142377 1548 P48643 CCT5 T-complex protein 1 subunit epsilon yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 66.647 66.727 2 0.023392 76937 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 87.582 37.043 453410000 0 0 0 11324000 14067000 55584000 0 15069000 20560000 50254000 46277000 57990000 32741000 46465000 103070000 5767 1548 5245 49775;49776;49777;49778;49779;49780;49781;49782;49783;49784;49785 39373;39374;39375;39376;39377;39378;39379;39380;39381;39382;39383 39375 11 AVTIHDTEK Unmodified 1012.5189 0.51892433 3 A0AVT1 UBA6 Ubiquitin-like modifier-activating enzyme 6 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 12.587 11.113 2 0.0052938 14741 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.38 68.946 191340000 0 188300000 0 0 0 0 0 0 0 0 0 0 0 0 3036100 5768 3 5246 49786;49787 39384;39385 39384 2 AVTITLK Acetyl (Protein N-term) 786.48511 0.485105 1745 P54725 RAD23A UV excision repair protein RAD23 homolog A yes yes 1 0 0 By MS/MS By MS/MS By matching By matching 7.75 3.9 1 3 1 1 1 1 80.852 82.36 1;2 0.0044297 84108 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 81.297 28.614 274580000 253260000 0 0 0 0 0 0 0 0 0 5490200 0 0 4484400 11343000 5769 1745 5247 49788;49789;49790;49791 39386;39387 39387 2 AVTKDEDEWK Unmodified 1219.5721 0.57208211 4980 Q9UKY7 CDV3 Protein CDV3 homolog yes yes 0 0 1 By matching By MS/MS 2.25 0.433 3 1 1 3 23.923 19.625 2;3 0.0032754 24550 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 96.342 83.726 105280000 2284900 102990000 0 0 0 0 0 0 0 0 0 0 0 0 0 5770 4980 5248 49792;49793;49794;49795 39388;39389;39390 39390 1 AVTLAVQPR Unmodified 953.56581 0.56581494 238 O14981 BTAF1 TATA-binding protein-associated factor 172 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 43.774 44.077 2 0.024533 48200 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.607 6.1597 35374000 0 0 0 0 0 7901600 0 0 0 7347600 0 0 0 7294300 12830000 5771 238 5249 49796;49797;49798;49799 39391;39392;39393 39393 3 AVTLHDQGTAQWADLSSQFYLREEDIGK Unmodified 3177.5367 0.53670624 1137 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 1 By MS/MS By MS/MS 2.67 0.471 1 2 2 1 89.896 84.931 4 6.0356E-56 108057 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 117.73 115.41 108180000 92349000 15832000 0 0 0 0 0 0 0 0 0 0 0 0 0 5772 1137 5250 49800;49801;49802 39394;39395;39396 39396 3 AVTLNPDNSYIK Unmodified 1333.6878 0.68778057 2271 Q13325 IFIT5 Interferon-induced protein with tetratricopeptide repeats 5 yes yes 0 0 0 By MS/MS 2 0 1 1 64.069 58.161 2 6.1341E-07 74563 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.52 90.959 22625000 0 22625000 0 0 0 0 0 0 0 0 0 0 0 0 0 5773 2271 5251 49803 39397 39397 1 AVTNCESLVK Unmodified 1119.5594 0.55940893 2486 Q15047 SETDB1 Histone-lysine N-methyltransferase SETDB1 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 32.033 32.247 2 0.0056704 33894 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.016 41.227 38905000 0 0 0 5140400 0 4607800 0 4773300 3987800 4652400 0 7877200 0 0 7866400 5774 2486 5252 49804;49805;49806;49807;49808;49809;49810 39398;39399;39400;39401;39402 39399 5 AVTNFGVPVEVFDSEEAEIFQK Unmodified 2454.1955 0.19547151 4552 Q9NPI1 BRD7 Bromodomain-containing protein 7 yes yes 0 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 3 1 98.241 94.433 3 5.2553E-11 116285 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.752 65.747 59402000 0 56419000 2982900 0 0 0 0 0 0 0 0 0 0 0 0 5775 4552 5253 49811;49812;49813;49814 39403;39404;39405;39406 39403 4 AVTPNGEIR Unmodified 955.50869 0.50869399 3944 Q96P48 ARAP1 Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.899 24.104 2 0.006387 25239 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 75.213 49.763 69295000 0 0 0 4053200 3103800 5417300 4746000 4008100 2904900 6407500 6007200 8092100 7482900 5440600 11631000 5776 3944 5254 49815;49816;49817;49818;49819;49820;49821;49822;49823;49824;49825;49826 39407;39408;39409;39410;39411;39412;39413;39414;39415;39416;39417 39408 11 AVTPPMPLLTPATPGGLPPAAAVAAAAATAK Oxidation (M) 2809.5412 0.54118668 4912 Q9UHX1 PUF60 Poly(U)-binding-splicing factor PUF60 yes yes 0 1 0 By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 2 1 1 1 1 1 94.69 94.811 3;4 3.8531E-18 110411 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 47.159 41.185 427630000 0 0 0 0 5666300 0 3067100 101890000 5240200 161690000 9971400 117010000 23096000 0 0 5777 4912 5255 49827;49828;49829;49830;49831;49832;49833;49834;49835 39418;39419;39420;39421 39419 6267 3 AVTPPMPLLTPATPGGLPPAAAVAAAAATAK Unmodified 2793.5463 0.54627206 4912 Q9UHX1 PUF60 Poly(U)-binding-splicing factor PUF60 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.09 3.85 4 7 1 3 1 1 1 1 1 1 1 98.335 96.395 2;3;4 6.7827E-34 113469 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 76.208 73.801 416850000 18434000 265320000 0 0 0 2073800 0 7605800 2012300 27274000 13566000 7177400 0 0 73389000 5778 4912 5255 49836;49837;49838;49839;49840;49841;49842;49843;49844;49845;49846 39422;39423;39424;39425;39426;39427;39428;39429;39430;39431;39432;39433 39422 12 AVTPSPEQVFAECSQK Unmodified 1776.8352 0.83524944 297 O43149 ZZEF1 Zinc finger ZZ-type and EF-hand domain-containing protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 2 2 4 74.468 70.093 2;3 1.0046E-06 87733 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.72 95.313 114420000 0 114420000 0 0 0 0 0 0 0 0 0 0 0 0 0 5779 297 5256 49847;49848;49849;49850 39434;39435 39434 1 AVTPVPTK Unmodified 811.48035 0.48035398 2961 Q6PKG0 LARP1 La-related protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 22.068 22.277 2 0.017183 22715 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 66.073 40.455 147780000 0 0 0 8918900 7698900 13009000 10625000 8472900 10558000 0 20547000 21472000 15169000 15640000 15671000 5780 2961 5257 49851;49852;49853;49854;49855;49856;49857;49858;49859;49860;49861 39436;39437;39438;39439;39440;39441 39439 6 AVTPVSQGSNSSSADPK Unmodified 1630.7798 0.77984305 165 O00512 BCL9 B-cell CLL/lymphoma 9 protein yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 21.741 21.841 2 0.0011361 22854 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 55.452 38.82 45390000 0 0 0 3588600 2739900 4488900 5671400 0 5292400 5526000 0 11537000 0 6545800 0 5781 165 5258 49862;49863;49864;49865;49866;49867;49868;49869;49870;49871 39442;39443;39444;39445;39446;39447;39448;39449 39443 8 AVTQALNR Unmodified 871.48756 0.48756462 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.402 19.598 2 0.0059726 18681 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 118.69 63.9 385590000 0 0 0 23293000 17058000 43638000 25715000 20045000 15174000 41158000 37207000 46673000 30923000 30811000 53892000 5782 5187 5259 49872;49873;49874;49875;49876;49877;49878;49879;49880;49881;49882;49883 39450;39451;39452;39453;39454;39455;39456;39457;39458;39459;39460;39461 39457 5 AVTSGLPGDTALLLPPSPRPSPR Unmodified 2298.2696 0.26957993 2989 Q6W2J9 BCOR BCL-6 corepressor yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 82.203 82.339 3 0.0011307 95195 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 31.759 26.501 28875000 0 0 0 0 0 4179700 1537900 4404100 3457200 5493600 3664800 4228200 1909600 0 0 5783 2989 5260 49884;49885;49886;49887;49888;49889;49890;49891 39462;39463;39464;39465 39464 3 AVTTNQWHR Unmodified 1111.5523 0.55229014 5301 Q9Y6Y8 SEC23IP SEC23-interacting protein yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 19.458 19.979 2 0.0052334 20587 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 79.469 58.77 20801000 0 0 0 0 0 0 0 0 0 0 4088800 5782700 4810500 0 6119100 5784 5301 5261 49892;49893;49894;49895 39466;39467;39468 39467 3 AVTTPEHATLETILR Unmodified 1650.8941 0.89408495 4642 Q9NUA8 ZBTB40 Zinc finger and BTB domain-containing protein 40 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 73.538 73.652 3 0.001552 84940 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 47.639 36.695 81192000 0 0 0 0 5563000 6806300 0 9729800 0 11364000 8356400 3524100 7949200 11510000 16389000 5785 4642 5262 49896;49897;49898;49899;49900;49901;49902;49903;49904 39469;39470;39471;39472;39473;39474 39471 4 AVTTVTQSTPVPGPSVPPPEELQVSPGPR Unmodified 2923.5291 0.52910167 1663 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 36 3 3 3 3 3 3 3 3 3 3 3 3 80.798 80.857 2;3;4 1.386E-119 93217 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 115.45 104.14 1429100000 0 0 0 44293000 94927000 101390000 108730000 101220000 105570000 156960000 130800000 178020000 116170000 116300000 174730000 5786 1663 5263 49905;49906;49907;49908;49909;49910;49911;49912;49913;49914;49915;49916;49917;49918;49919;49920;49921;49922;49923;49924;49925;49926;49927;49928;49929;49930;49931;49932;49933;49934;49935;49936;49937;49938;49939;49940 39475;39476;39477;39478;39479;39480;39481;39482;39483;39484;39485;39486;39487;39488;39489 39478 15 AVTVEFK Unmodified 792.43815 0.43815481 593 O94855 SEC24D Protein transport protein Sec24D yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 44.943 40.397 2 0.036349 52285 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.614 39.083 53045000 0 49713000 3332600 0 0 0 0 0 0 0 0 0 0 0 0 5787 593 5264 49941;49942 39490 39490 1 AVTVMMDPNSTQR Oxidation (M) 1464.6701 0.67009837 4491 Q9HAV4 XPO5 Exportin-5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 2 1 1 1 1 39.323 39.492 2 0.00057609 43963 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 68.893 48.589 63619000 0 0 0 4434700 3782200 10263000 3903100 5047100 0 7073400 4862400 8133200 0 5917800 10203000 5788 4491 5265 49943;49944;49945;49946;49947;49948;49949;49950;49951;49952;49953 39491;39492;39493;39494;39495;39496;39497;39498;39499 39492 5923;5924 9 AVTVMMDPNSTQR Unmodified 1448.6752 0.67518375 4491 Q9HAV4 XPO5 Exportin-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 48.908 49.631 2 0.0025812 56355 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 76.228 58.092 15540000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15540000 5789 4491 5265 49954;49955;49956 39500;39501;39502 39500 2 AVTVMMDPNSTQR 2 Oxidation (M) 1480.665 0.66501299 4491 Q9HAV4 XPO5 Exportin-5 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 22.303 22.016 2 0.0011364 22903 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 76.143 65.385 2773900 0 0 0 0 2773900 0 0 0 0 0 0 0 0 0 0 5790 4491 5265 49957;49958;49959 39503;39504;39505 39503 5923;5924 3 AVVAPVEK Unmodified 811.48035 0.48035398 2748 Q5MIZ7 SMEK2 Serine/threonine-protein phosphatase 4 regulatory subunit 3B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.937 24.142 2 0.016586 25914 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 67.032 31.538 58769000 0 0 0 3059000 2278400 5211500 3233600 2224300 2361600 5619100 6801900 6964000 7021100 4852600 9141700 5791 2748 5266 49960;49961;49962;49963;49964;49965;49966;49967;49968;49969;49970;49971 39506;39507;39508;39509 39506 4 AVVAQAVR Unmodified 812.48684 0.48683634 601 O94906 PRPF6 Pre-mRNA-processing factor 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.134 20.335 2 0.013435 20435 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 72.355 20.123 150080000 0 0 0 14612000 9799900 9614900 11066000 9475600 7263100 12206000 16594000 22169000 11825000 12230000 13228000 5792 601 5267 49972;49973;49974;49975;49976;49977;49978;49979;49980;49981;49982;49983 39510;39511;39512;39513 39513 4 AVVAQHVAPPPGIVEIDSEK Unmodified 2055.1001 0.10005498 2852 Q68CP9 ARID2 AT-rich interactive domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 71.815 71.943 3 4.2727E-28 82212 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 101.49 92.674 248060000 0 0 0 0 17239000 26156000 15385000 17686000 14497000 26597000 20172000 27339000 21109000 26784000 35098000 5793 2852 5268 49984;49985;49986;49987;49988;49989;49990;49991;49992;49993;49994 39514;39515;39516;39517;39518;39519;39520;39521;39522;39523;39524;39525;39526;39527;39528;39529 39521 16 AVVDAGITTK Unmodified 973.54441 0.5444108 4783 Q9NZW5 MPP6 MAGUK p55 subfamily member 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 2 1 1 34.091 34.288 2 0.034153 37566 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 41.876 16.982 49352000 0 0 0 2563400 2909200 4329100 5003400 0 2113000 4879100 4980000 5836700 8707400 3093200 4937200 5794 4783 5269 49995;49996;49997;49998;49999;50000;50001;50002;50003;50004;50005;50006 39530;39531;39532;39533;39534 39531 5 AVVGDAQYHHFR Unmodified 1398.6793 0.67928157 1530 P47929 LGALS7 Galectin-7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 5 2 2 1 29.927 30.009 2;3 1.9299E-08 33012 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 112.15 96.603 329050000 0 0 0 220580000 0 0 0 90555000 0 0 0 17913000 0 0 0 5795 1530 5270 50007;50008;50009;50010;50011 39535;39536;39537;39538;39539 39538 5 AVVGEEALTSDDLLYLEFLQK Unmodified 2352.2101 0.21005894 1121 P21281 ATP6V1B2 V-type proton ATPase subunit B, brain isoform yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 2 2 1 100 94.654 3 3.0811E-18 117934 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 103.85 89.69 45083000 31521000 10758000 2803900 0 0 0 0 0 0 0 0 0 0 0 0 5796 1121 5271 50012;50013;50014;50015;50016 39540;39541;39542;39543 39542 4 AVVGVVAGGGR Unmodified 940.54541 0.54541385 1930 P62917 RPL8 60S ribosomal protein L8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.872 33.056 2 6.1218E-05 34829 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 113.91 82.901 508410000 0 0 0 24248000 32511000 32755000 35630000 33310000 23439000 46709000 45619000 91260000 59512000 31590000 51828000 5797 1930 5272 50017;50018;50019;50020;50021;50022;50023;50024;50025;50026;50027;50028 39544;39545;39546;39547;39548;39549;39550;39551;39552;39553;39554;39555 39547 12 AVVGYEDGTIR Unmodified 1178.5932 0.5931519 2341 Q13685 AAMP Angio-associated migratory cell protein yes yes 0 0 0 By MS/MS 10 0 1 1 27.206 27.209 3 0.037435 29309 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 26.043 10.835 3282100 0 0 0 0 0 3282100 0 0 0 0 0 0 0 0 0 5798 2341 5273 50029 39556 39556 1 AVVISGAGK Unmodified 800.4756 0.47560295 2223 Q13011 ECH1 Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial yes yes 0 0 0 By MS/MS 10 0 1 1 20.732 21.377 2 0.043067 21735 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 43.769 6.6754 5211600 0 0 0 0 0 0 0 0 0 0 0 5211600 0 0 0 5799 2223 5274 50030 39557 39557 1 AVVIVDDR Unmodified 885.49198 0.4919813 1151;2508 P23246;Q15233 SFPQ;NONO Splicing factor, proline- and glutamine-rich;Non-POU domain-containing octamer-binding protein no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.939 36.119 2 0.006779 39426 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 125.25 78.589 1095300000 0 0 0 60199000 60995000 94171000 99884000 58192000 47237000 114090000 97685000 137810000 71754000 93645000 159680000 5800 1151;2508 5275 50031;50032;50033;50034;50035;50036;50037;50038;50039;50040;50041;50042 39558;39559;39560;39561;39562;39563;39564;39565;39566;39567;39568;39569 39563 7 AVVIVDDRGR Unmodified 1098.6146 0.61455605 1151;2508 P23246;Q15233 SFPQ;NONO Splicing factor, proline- and glutamine-rich;Non-POU domain-containing octamer-binding protein no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 28.808 29.034 2 9.3461E-16 31734 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 170.66 131.87 134620000 0 0 0 9900400 0 0 18479000 8716900 14674000 10985000 25382000 22171000 12550000 11767000 0 5801 1151;2508 5276 50043;50044;50045;50046;50047;50048;50049;50050;50051;50052 39570;39571;39572;39573;39574;39575;39576 39575 7 AVVIVDDRGRPSGK Unmodified 1467.8158 0.81577505 2508 Q15233 NONO Non-POU domain-containing octamer-binding protein yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.109 27.306 3 0.0032275 28327 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 66.004 42.07 318780000 0 0 0 15169000 11527000 25921000 33032000 17742000 16928000 36541000 33138000 49401000 17968000 16379000 45037000 5802 2508 5277 50053;50054;50055;50056;50057;50058;50059;50060;50061;50062;50063;50064 39577;39578;39579;39580;39581;39582;39583;39584;39585;39586;39587;39588;39589;39590;39591 39586 13 AVVLEYFTR Unmodified 1096.5917 0.59169534 681 O95707 POP4 Ribonuclease P protein subunit p29 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 78.322 78.402 2 0.0069711 90586 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.665 57.462 38670000 0 0 0 0 2838100 3732300 2412800 0 3780500 5908100 4650900 7208200 3860600 4278400 0 5803 681 5278 50065;50066;50067;50068;50069;50070;50071;50072;50073 39592;39593;39594;39595;39596;39597 39596 6 AVVLPGGTATSPK Unmodified 1196.6765 0.6764876 3312 Q8N1G0 ZNF687 Zinc finger protein 687 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 46.961 46.344 2 6.9835E-05 58962 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.53 80.177 165440000 0 48948000 0 5001900 6885400 6732100 8061500 8864600 8102200 12050000 11630000 15597000 11562000 10615000 11389000 5804 3312 5279 50074;50075;50076;50077;50078;50079;50080;50081;50082;50083;50084;50085;50086;50087 39598;39599;39600;39601;39602;39603;39604;39605;39606;39607 39601 10 AVVLQAQNQMSEAHK Unmodified 1652.8304 0.83043884 4945 Q9UJX4 ANAPC5 Anaphase-promoting complex subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.8 3.12 3 1 1 1 2 1 1 42.934 37.821 3 1.2752E-06 47359 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 100.11 93.733 102440000 39202000 54628000 8609900 0 0 0 0 0 0 0 0 0 0 0 0 5805 4945 5280 50088;50089;50090;50091;50092 39608;39609;39610;39611 39609 4 AVVLQAQNQMSEAHK Oxidation (M) 1668.8254 0.82535346 4945 Q9UJX4 ANAPC5 Anaphase-promoting complex subunit 5 yes yes 0 1 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 28.921 23.968 3 0.0005704 29956 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 64.244 59.928 24137000 9734200 14403000 0 0 0 0 0 0 0 0 0 0 0 0 0 5806 4945 5280 50093;50094 39612;39613 39612 6291 2 AVVMDLLR Oxidation (M) 931.51609 0.51608756 2231 Q13085 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes yes 0 1 0 By MS/MS By matching By matching 10 0 3 1 1 1 60.579 60.988 2 0.026996 69772 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 50.127 27.995 9003100 0 0 0 0 0 0 0 0 0 2449700 0 3554600 0 0 2998800 5807 2231 5281 50095;50096;50097 39614 39614 1 AVVMTPVPLFSK Oxidation (M) 1303.721 0.72099495 234 O14976 GAK Cyclin-G-associated kinase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 80.187 80.187 2 5.3634E-09 92643 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 140.45 111.36 167580000 0 0 0 16948000 18362000 19341000 29201000 22544000 16948000 23026000 0 0 21211000 0 0 5808 234 5282 50098;50099;50100;50101;50102;50103;50104;50105 39615;39616;39617;39618;39619;39620;39621;39622;39623;39624 39615 312 10 AVVMTPVPLFSK Unmodified 1287.7261 0.72608033 234 O14976 GAK Cyclin-G-associated kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 85.545 85.612 2 0.0010378 99259 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 86.898 63.47 91263000 0 0 0 3383100 3656300 6197700 5299200 10055000 4185100 6657400 7068700 10916000 6418600 8471600 18954000 5809 234 5282 50106;50107;50108;50109;50110;50111;50112;50113;50114;50115;50116;50117 39625;39626;39627;39628;39629;39630;39631;39632 39626 8 AVVNDATIFK Unmodified 1076.5866 0.58660996 3704 Q93034 CUL5 Cullin-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60.96 59.718 2 0.0029937 67052 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.113 35.198 196330000 4868600 138990000 5361000 0 1473300 4327700 3573500 0 1869400 5215400 5075500 5495700 4083500 5533300 10463000 5810 3704 5283 50118;50119;50120;50121;50122;50123;50124;50125;50126;50127;50128;50129;50130;50131 39633;39634;39635;39636;39637;39638;39639;39640;39641;39642 39637 10 AVVPASLSGQDVGSFAYLTIK Acetyl (Protein N-term) 2164.1416 0.14158544 4465 Q9H993 ARMT1 Protein-glutamate O-methyltransferase yes yes 1 0 0 By MS/MS 3 0 1 1 98.325 94.974 3 0.0016026 113940 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 40.756 33.304 5656300 0 5656300 0 0 0 0 0 0 0 0 0 0 0 0 0 5811 4465 5284 50132 39643 39643 1 AVVPPISLSTTFK Unmodified 1358.781 0.78095267 1325 P32929 CTH Cystathionine gamma-lyase yes yes 0 0 0 By MS/MS 10 0 1 1 84.015 84.194 2 0.0085875 97209 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.056 42.343 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5812 1325 5285 50133 39644 39644 1 AVVPQQELLDK Unmodified 1238.6871 0.68705229 691 O95789 ZMYM6 Zinc finger MYM-type protein 6 yes yes 0 0 0 By MS/MS 2 0 1 1 62.577 56.683 2 0.00046228 72712 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.35 101.21 15690000 0 15690000 0 0 0 0 0 0 0 0 0 0 0 0 0 5813 691 5286 50134 39645 39645 1 AVVPSYIPLVK Unmodified 1184.7169 0.71689585 1376 P36551 CPOX Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial yes yes 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 82.037 82.078 2 0.032231 94704 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.086 29.223 18527000 0 0 0 1371400 1545100 955290 974550 0 1533200 0 2545100 3230400 0 1867600 4504200 5814 1376 5287 50135;50136;50137;50138;50139;50140;50141;50142;50143 39646 39646 1 AVVQSPQVTEVL Unmodified 1268.6976 0.69761697 2667 Q3KQU3 MAP7D1 MAP7 domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 78.869 78.817 2 0.0092956 91181 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 53.968 42.12 39388000 0 0 0 3017000 7535500 8959400 8260600 3939600 0 0 0 0 7676400 0 0 5815 2667 5288 50144;50145;50146;50147;50148;50149 39647;39648;39649 39648 3 AVVQVFEGTSGIDAK Unmodified 1519.7882 0.7882229 1121 P21281 ATP6V1B2 V-type proton ATPase subunit B, brain isoform yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.36 3.15 2 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 72.662 71.531 2 1.2172E-37 89096 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 167.18 139.88 498390000 0 393200000 9473300 9603800 6243200 0 0 0 0 17224000 17866000 0 9881900 12389000 22509000 5816 1121 5289 50150;50151;50152;50153;50154;50155;50156;50157;50158;50159;50160;50161;50162;50163 39650;39651;39652;39653;39654;39655;39656;39657;39658;39659;39660;39661;39662;39663 39652 14 AVVTEPAK Unmodified 813.45962 0.45961853 2456 Q14966 ZNF638 Zinc finger protein 638 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 15.105 15.35 2 0.044749 15066 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 48.787 28.305 51424000 0 0 0 3410000 0 0 4209200 0 3287600 0 6603300 7315300 9825200 8008900 8764100 5817 2456 5290 50164;50165;50166;50167;50168;50169;50170;50171 39664 39664 1 AVVTHSSGNHGQALTYAAK Unmodified 1910.9599 0.9598731 4305 Q9GZT4 SRR Serine racemase yes yes 0 0 0 By MS/MS By MS/MS 2 0 4 2 2 32.503 27.789 3;4 3.4012E-68 39392 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 148.44 121.23 90502000 86492000 0 4010400 0 0 0 0 0 0 0 0 0 0 0 0 5818 4305 5291 50172;50173;50174;50175 39665;39666 39666 2 AVVTLDASDDGILAK Unmodified 1486.7879 0.78788854 144 O00330 PDHX Pyruvate dehydrogenase protein X component, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 79.203 74.468 2 0.0006465 92810 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.4 69.986 25064000 0 25064000 0 0 0 0 0 0 0 0 0 0 0 0 0 5819 144 5292 50176 39667 39667 1 AVVVCPK Unmodified 771.4313 0.43129529 2046 Q00839 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 24.649 20.561 2 0.040642 26823 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.377 53.061 1385600000 0 1385600000 0 0 0 0 0 0 0 0 0 0 0 0 0 5820 2046 5293 50177;50178 39668;39669 39668 2 AVVVCPKDEDYK Unmodified 1421.6861 0.68606601 2046 Q00839 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.18 2.38 2 1 25 1 2 2 2 2 2 2 2 2 3 2 2 2 2 33.114 32.699 2;3 0.00033099 35399 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 78.903 74.288 1425700000 13016000 128700000 0 108280000 157180000 15732000 17666000 98781000 29314000 83398000 200460000 182300000 171460000 138440000 80918000 5821 2046 5294 50179;50180;50181;50182;50183;50184;50185;50186;50187;50188;50189;50190;50191;50192;50193;50194;50195;50196;50197;50198;50199;50200;50201;50202;50203;50204;50205;50206 39670;39671;39672;39673;39674;39675;39676;39677;39678;39679;39680;39681;39682;39683;39684;39685 39683 13 AVVVGFDPHFSYMK Unmodified 1595.7806 0.7806351 23 A6NDG6 PGP Phosphoglycolate phosphatase yes yes 0 0 0 By MS/MS 10 0 1 1 80.07 80.3 3 0.012252 92509 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.891 25.565 12501000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12501000 5822 23 5295 50207 39686 39686 1 AVVVPARSEALGK Unmodified 1295.7561 0.75613491 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.07 39.25 3 0.0022053 43609 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 38.674 31.79 264260000 0 0 0 16405000 16529000 11211000 26188000 23940000 18108000 23035000 32734000 29416000 21261000 16248000 29189000 5823 4139 5296 50208;50209;50210;50211;50212;50213;50214;50215;50216;50217;50218;50219 39687;39688;39689 39688 1 AVVVTDGER Unmodified 944.49271 0.49270958 1154 P23368;Q16798 ME2;ME3 NAD-dependent malic enzyme, mitochondrial;NADP-dependent malic enzyme, mitochondrial yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 20.473 20.602 2 0.0051099 21203 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 83.313 64.582 786940000 0 0 0 39878000 59112000 71379000 83748000 90882000 60699000 84894000 106170000 190180000 0 0 0 5824 1154 5297 50220;50221;50222;50223;50224;50225;50226;50227;50228 39690;39691;39692;39693;39694;39695;39696;39697;39698;39699;39700 39696 11 AVVVVDDR Unmodified 871.47633 0.47633123 3589 Q8WXF1 PSPC1 Paraspeckle component 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 28.745 29.11 2 0.032702 31585 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 54.157 25.291 14379000 0 0 0 0 0 0 4115700 0 0 0 0 10263000 0 0 0 5825 3589 5298 50229;50230 39701 39701 1 AVVVVDDRGR Unmodified 1084.5989 0.59890598 3589 Q8WXF1 PSPC1 Paraspeckle component 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 23.21 23.388 2 0.03732 23780 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 91.069 66.174 40775000 0 0 0 1984200 1870700 1429900 2927900 2933100 1278300 4390900 0 7932500 5155600 4374700 6496900 5826 3589 5299 50231;50232;50233;50234;50235;50236;50237;50238;50239;50240;50241 39702 39702 1 AVVVVDDRGRATGK Unmodified 1441.8001 0.80012499 3589 Q8WXF1 PSPC1 Paraspeckle component 1 yes yes 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 26.44 22.201 3 0.037985 31770 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.317 30.843 42655000 37081000 0 5574500 0 0 0 0 0 0 0 0 0 0 0 0 5827 3589 5300 50242;50243 39703 39703 1 AVWLPAMK Oxidation (M) 930.49971 0.49970921 2178 Q10567 AP1B1 AP-1 complex subunit beta-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 2 1 1 1 1 1 1 1 1 1 1 55.674 55.714 2 0.020859 63498 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 54.787 30.283 54902000 0 0 0 12395000 2484000 4324900 3565800 3845600 2470900 5247000 0 5115700 4416100 5433100 5604200 5828 2178 5301 50244;50245;50246;50247;50248;50249;50250;50251;50252;50253;50254;50255 39704;39705;39706;39707 39704 4 AVWLPAMK Unmodified 914.50479 0.50479459 2178 Q10567 AP1B1 AP-1 complex subunit beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 74.579 74.617 2 0.038617 85109 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 50.966 34.039 58427000 0 0 0 2734800 2592000 6484400 3130100 5886500 0 6266400 0 6355000 4865500 7280800 12832000 5829 2178 5301 50256;50257;50258;50259;50260;50261;50262;50263;50264;50265 39708 39708 1 AVWLPAVK Unmodified 882.53272 0.5327239 1937 P63010 AP2B1 AP-2 complex subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73.684 72.824 2 0.0089849 83648 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 84.359 45.14 367950000 141570000 62700000 0 8267200 8884700 14825000 9638600 11061000 8100200 19225000 14175000 16979000 10813000 14746000 26964000 5830 1937 5302 50266;50267;50268;50269;50270;50271;50272;50273;50274;50275;50276;50277;50278;50279 39709;39710;39711;39712;39713;39714;39715;39716;39717;39718;39719;39720;39721;39722 39716 14 AVWLTAFEK Unmodified 1063.5702 0.57023162 392 O60293 ZFC3H1 Zinc finger C3H1 domain-containing protein yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 81.22 81.358 2 0.03575 93387 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 45.972 24.012 13593000 0 0 0 0 0 0 2002500 0 1963300 0 0 3307200 3104800 3215300 0 5831 392 5303 50280;50281;50282;50283;50284 39723;39724 39723 2 AVYDTNPAK Unmodified 977.48181 0.48181054 4764 Q9NZD2 GLTP Glycolipid transfer protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.64 2.9 1 1 9 2 1 1 1 1 1 1 1 1 1 21.243 20.732 2 0.030437 25501 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.429 37.28 90159000 0 29034000 0 12877000 3297400 0 0 3649800 0 6971900 7720300 7624700 6602000 5580700 6801900 5832 4764 5304 50285;50286;50287;50288;50289;50290;50291;50292;50293;50294;50295 39725;39726;39727 39726 3 AVYEDRPPGSVVPTSAAEASR Unmodified 2158.0655 0.065460388 4355 Q9H1Z4 WDR13 WD repeat-containing protein 13 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 54.157 54.48 3 0.0014714 61658 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 36.523 27.24 28043000 0 0 0 0 0 0 5107200 0 0 7062400 7460600 0 0 0 8412400 5833 4355 5305 50296;50297;50298;50299;50300;50301 39728;39729;39730;39731;39732;39733 39729 5 AVYMMPTEGDDSSK Oxidation (M) 1545.6327 0.63270981 3702 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 43.383 42.697 2 6.9448E-08 48071 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 92.866 91.751 154850000 0 25294000 0 10903000 6606100 19393000 10004000 8666200 8565100 9456200 15350000 0 13253000 9308200 18052000 5834 3702 5306 50302;50303;50304;50305;50306;50307;50308;50309;50310;50311;50312;50313;50314;50315;50316 39734;39735;39736;39737;39738;39739;39740;39741;39742;39743;39744;39745;39746;39747 39742 5272;5273 13 AVYMMPTEGDDSSK Unmodified 1529.6378 0.63779519 3702 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 51.678 51.386 2 0.00048082 58289 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 90.913 80.155 300560000 0 135090000 0 9838900 0 9877300 7761900 10289000 8301300 16263000 21205000 17351000 17307000 12949000 34327000 5835 3702 5306 50317;50318;50319;50320;50321;50322;50323;50324;50325;50326;50327;50328 39748;39749;39750;39751;39752;39753;39754;39755;39756;39757;39758;39759;39760 39748 12 AVYMMPTEGDDSSK 2 Oxidation (M) 1561.6276 0.62762443 3702 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 23.811 23.951 2 0.00096835 24665 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 49.35 46.837 20428000 0 0 0 2598300 2159600 0 2313600 1844100 1706900 3182000 2476600 4147100 0 0 0 5836 3702 5306 50329;50330;50331;50332;50333;50334;50335;50336 39761;39762 39762 5272;5273 2 AVYQARPQLHK Unmodified 1309.7255 0.72550348 2401 Q14258 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.197 22.402 3 0.030925 22526 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 30.06 8.3654 130670000 0 0 0 9220900 5921800 7821500 5999300 9146400 6665700 15813000 11189000 12769000 12226000 17148000 16751000 5837 2401 5307 50337;50338;50339;50340;50341;50342;50343;50344;50345;50346;50347;50348 39763 39763 1 AVYSTNCPVWEEAFR Unmodified 1827.825 0.82501911 4128 Q9BSJ8 ESYT1 Extended synaptotagmin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 83.31 83.419 2 0.0013307 96643 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 69.451 59.663 4907400 0 0 0 0 0 2538300 0 2369000 0 0 0 0 0 0 0 5838 4128 5308 50349;50350;50351 39764;39765;39766 39764 3 AVYTQDCPLAAAK Unmodified 1406.6864 0.68640036 1578 P49588 AARS Alanine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.9 3.81 3 1 6 1 2 1 1 1 1 1 1 1 50.765 48.574 2 1.3795E-21 61661 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145.72 131.43 1639500000 35661000 1326100000 3937600 9823800 8621500 0 12919000 0 0 0 54744000 62354000 0 0 125300000 5839 1578 5309 50352;50353;50354;50355;50356;50357;50358;50359;50360;50361 39767;39768;39769;39770;39771;39772;39773;39774;39775;39776;39777;39778 39768 12 AVYVVDDAAVLGAEDPAVYGDSAR Unmodified 2422.1652 0.16523401 3816 Q96EK9 KTI12 Protein KTI12 homolog yes yes 0 0 0 By MS/MS 10 0 1 1 84.537 84.64 3 0.018211 98049 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 21.055 12.868 6937300 0 0 0 0 0 0 0 0 0 6937300 0 0 0 0 0 5840 3816 5310 50362 39779 39779 1 AWALLQK Unmodified 828.48577 0.48577371 2230 Q13057 COASY Bifunctional coenzyme A synthase;Phosphopantetheine adenylyltransferase;Dephospho-CoA kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 64.236 63.696 2 0.031888 87031 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.627 38.779 227910000 51022000 0 0 9289700 8562300 20214000 10724000 10461000 8439300 18393000 16690000 23226000 11612000 14629000 24646000 5841 2230 5311 50363;50364;50365;50366;50367;50368;50369;50370;50371;50372;50373;50374;50375 39780;39781;39782 39782 3 AWDIAIATMK Oxidation (M) 1134.5743 0.57433072 2080 Q02790 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 73.245 72.087 2 0.001957 82113 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.264 68.871 404770000 45990000 206750000 31690000 4170300 3604800 9222900 6213100 5848900 6345000 10250000 17464000 15789000 6030600 9366300 26039000 5842 2080 5312 50376;50377;50378;50379;50380;50381;50382;50383;50384;50385;50386;50387;50388;50389;50390;50391 39783;39784;39785;39786;39787;39788;39789;39790;39791;39792;39793;39794;39795;39796;39797;39798;39799 39787 3384 17 AWDIAIATMK Unmodified 1118.5794 0.57941609 2080 Q02790 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.48 1 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80.343 80.534 2 0.003743 92879 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 75.378 60.603 274560000 58162000 13860000 37438000 3218500 2040400 10834000 4836600 5993400 5101900 10331000 19112000 14733000 4797300 12798000 71304000 5843 2080 5312 50392;50393;50394;50395;50396;50397;50398;50399;50400;50401;50402;50403;50404;50405;50406;50407 39800;39801;39802;39803;39804;39805;39806;39807;39808;39809;39810;39811;39812;39813;39814;39815 39805 16 AWDIGVATMK Oxidation (M) 1106.543 0.54303059 2294 Q13451 FKBP5 Peptidyl-prolyl cis-trans isomerase FKBP5;Peptidyl-prolyl cis-trans isomerase FKBP5, N-terminally processed yes yes 0 1 0 By MS/MS By MS/MS By matching 2.25 0.433 3 1 1 2 1 65.426 60.626 2 0.0052318 77939 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.083 69.244 98564000 0 95873000 2691400 0 0 0 0 0 0 0 0 0 0 0 0 5844 2294 5313 50408;50409;50410;50411 39816;39817;39818;39819 39817 3753 4 AWDIGVATMK Unmodified 1090.5481 0.54811597 2294 Q13451 FKBP5 Peptidyl-prolyl cis-trans isomerase FKBP5;Peptidyl-prolyl cis-trans isomerase FKBP5, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.25 3.34 2 1 1 2 1 1 76.498 73.847 2 0.00065942 92544 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.71 95.3 50067000 0 37259000 3770200 0 0 0 0 0 0 0 0 0 0 0 9038000 5845 2294 5313 50412;50413;50414;50415 39820;39821;39822;39823 39820 4 AWDQEAEGAGPELGLR Unmodified 1697.8009 0.80091285 3293 Q8IZ83 ALDH16A1 Aldehyde dehydrogenase family 16 member A1 yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 72.083 72.109 2 7.1825E-15 82387 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.93 91.927 9014800 0 0 0 2180800 0 0 0 0 0 0 2576100 0 0 0 4258000 5846 3293 5314 50416;50417;50418 39824 39824 1 AWEEYYK Unmodified 987.4338 0.43379771 3690;3737 Q92945;Q96AE4 KHSRP;FUBP1 Far upstream element-binding protein 2;Far upstream element-binding protein 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 46.995 45.712 2 0.020127 56228 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 113.25 97.616 2404800000 74747000 1106700000 76935000 53707000 59483000 57831000 62758000 54782000 52952000 86723000 107480000 136710000 104150000 117560000 252240000 5847 3690;3737 5315 50419;50420;50421;50422;50423;50424;50425;50426;50427;50428;50429;50430;50431;50432;50433;50434 39825;39826;39827;39828;39829;39830;39831;39832;39833;39834;39835;39836;39837;39838;39839;39840 39832 15 AWELTQK Unmodified 874.45487 0.45486751 828 P06737 PYGL Glycogen phosphorylase, liver form yes yes 0 0 0 By MS/MS 2 0 1 1 44.174 38.955 2 0.034035 50641 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.359 40.749 17315000 0 17315000 0 0 0 0 0 0 0 0 0 0 0 0 0 5848 828 5316 50435 39841 39841 1 AWENSPNVR Unmodified 1071.5098 0.50975662 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.993 30.185 2 0.0051423 32152 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 82.305 67.641 267770000 0 0 0 26244000 15900000 13356000 17069000 15118000 15051000 23393000 22358000 28746000 31652000 26229000 32655000 5849 5216 5317 50436;50437;50438;50439;50440;50441;50442;50443;50444;50445;50446;50447 39842;39843;39844;39845;39846;39847;39848;39849;39850;39851;39852;39853;39854;39855 39847 14 AWENSPNVREK Unmodified 1328.6473 0.64731274 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 28.394 24.056 3 0.012935 33779 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.683 36.624 41597000 33976000 0 7621100 0 0 0 0 0 0 0 0 0 0 0 0 5850 5216 5318 50448;50449 39856;39857;39858 39856 2 AWEVDTCR Unmodified 1035.4444 0.44437918 1721 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 37.316 37.445 2 0.021412 41423 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 61.999 44.706 63380000 0 0 0 3563700 2653700 5353200 3356700 4426400 3978700 6607100 8017000 0 8999100 7267400 9156700 5851 1721 5319 50450;50451;50452;50453;50454;50455;50456;50457;50458;50459;50460 39859;39860;39861;39862 39861 4 AWGAVVPLVGK Unmodified 1095.6441 0.64406526 4654 Q9NUQ9 FAM49B Protein FAM49B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 81.213 80.093 2 0.0017439 92708 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 70.919 53.533 310310000 104130000 69074000 7174100 3181200 2878200 12996000 6199400 6700800 3751900 9960500 11172000 10571000 6422900 11673000 44425000 5852 4654 5320 50461;50462;50463;50464;50465;50466;50467;50468;50469;50470;50471;50472;50473;50474;50475;50476 39863;39864;39865;39866;39867;39868;39869;39870;39871;39872;39873;39874;39875;39876;39877;39878 39864 16 AWGPGLEGGVVGK Unmodified 1225.6455 0.64552182 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.965 66.049 2 0.00065043 76416 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 79.974 66.621 376620000 0 0 0 16716000 10601000 27456000 13677000 13871000 11565000 31058000 47157000 49299000 26366000 36079000 92775000 5853 1124 5321 50477;50478;50479;50480;50481;50482;50483;50484;50485;50486;50487;50488 39879;39880;39881;39882;39883;39884;39885;39886;39887;39888;39889;39890;39891 39890 13 AWGPGLHGGIVGR Unmodified 1275.6836 0.68363867 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS 10 0 1 1 57.117 57.728 3 0.0429 64933 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 29.071 13.532 10459000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10459000 5854 487 5322 50489 39892 39892 1 AWGPTSQDTIR Unmodified 1230.5993 0.59929991 4276 Q9BZV1 UBXN6 UBX domain-containing protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 46.53 46.699 2 0.00051485 52638 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 82.749 63.655 76274000 0 0 0 4268800 3530800 5731000 0 5685700 4564900 9240000 8828200 9776000 12972000 0 11677000 5855 4276 5323 50490;50491;50492;50493;50494;50495;50496;50497;50498;50499 39893;39894;39895;39896;39897;39898;39899;39900;39901 39893 9 AWGVPQDLIK Unmodified 1125.6182 0.61824444 3893 Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 79.212 79.29 2 0.019854 91560 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 47.574 28.48 48238000 0 0 0 0 2244600 6928200 0 0 0 7012300 4525500 9734400 3566500 3743000 10483000 5856 3893 5324 50500;50501;50502;50503;50504;50505;50506;50507;50508 39902;39903 39902 2 AWIEQEGVTVK Unmodified 1258.6558 0.65575216 2812 Q5VT79 ANXA8L2 Annexin A8-like protein 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 3.8 3.12 3 1 1 1 2 1 1 63.463 59.037 2 0.00049668 76066 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.71 76.732 197950000 6728000 181710000 2300100 0 0 0 0 0 0 0 0 0 0 0 7210200 5857 2812 5325 50509;50510;50511;50512;50513 39904;39905;39906;39907 39905 3 AWITAPVALREGEDLSK Unmodified 1854.984 0.98396259 2369 Q14126 DSG2 Desmoglein-2 yes yes 0 0 1 By MS/MS 2 0 1 1 86.029 77.899 3 0.017496 101580 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 34.094 15.261 6919300 6919300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5858 2369 5326 50514 39908 39908 1 AWNAYPYCR Unmodified 1199.5182 0.51821282 1554;2031 P48739;Q00169 PITPNB;PITPNA Phosphatidylinositol transfer protein beta isoform;Phosphatidylinositol transfer protein alpha isoform no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 51.657 51.865 2 0.0034047 57875 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 105.39 89.509 39425000 0 0 0 5831100 0 5574200 0 0 0 0 0 8778800 0 6622100 12619000 5859 1554;2031 5327 50515;50516;50517;50518;50519;50520 39909;39910;39911;39912;39913 39911 5 AWNESDLDVAYEK Unmodified 1538.6889 0.68890278 3542 Q8WUF5 PPP1R13L RelA-associated inhibitor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 68.695 68.044 2 7.1206E-08 78103 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 120.06 112.93 250240000 0 57024000 0 9891900 8386500 15576000 10099000 13515000 14413000 27321000 19702000 16939000 11780000 13279000 32308000 5860 3542 5328 50521;50522;50523;50524;50525;50526;50527;50528;50529;50530;50531;50532;50533;50534 39914;39915;39916;39917;39918;39919;39920;39921;39922;39923;39924 39923 11 AWNNPSPR Unmodified 940.45151 0.45151346 5211 Q9Y4W2 LAS1L Ribosomal biogenesis protein LAS1L yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 23.626 23.841 2 0.011381 25053 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 77.058 65.153 66564000 0 0 0 0 3645700 4496200 3071000 3917800 2274500 6156900 0 9582000 9766600 9943500 13710000 5861 5211 5329 50535;50536;50537;50538;50539;50540;50541;50542;50543;50544 39925;39926;39927 39925 3 AWNNQVCCK Unmodified 1178.4961 0.49609717 1663 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 29.207 24.223 2 0.0074224 31798 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.61 90.825 63369000 19226000 44143000 0 0 0 0 0 0 0 0 0 0 0 0 0 5862 1663 5330 50545;50546 39928;39929 39928 2 AWQGAMDAGAASR Unmodified 1290.5775 0.57751861 2377 Q14151 SAFB2 Scaffold attachment factor B2 yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 39.903 40.17 2 4.5746E-05 43664 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 88.681 73.53 29108000 0 0 0 3022100 0 0 0 3851700 0 4086500 0 8318200 0 3505000 6324100 5863 2377 5331 50547;50548;50549;50550;50551;50552;50553 39930;39931;39932;39933 39931 4 AWSDDTSQLGPDK Unmodified 1418.6314 0.6313879 3656 Q92759 GTF2H4 General transcription factor IIH subunit 4 yes yes 0 0 0 By MS/MS 2 0 1 1 48.833 43.186 2 0.002106 56225 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.954 69.134 15770000 0 15770000 0 0 0 0 0 0 0 0 0 0 0 0 0 5864 3656 5332 50554 39934 39934 1 AWTQVLLGQAEDK Unmodified 1457.7514 0.75144346 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.412 79.509 2 1.2357E-12 91513 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 125.72 104.85 99823000 0 0 0 0 4782000 7737000 5622600 0 5600200 11691000 9321600 9605100 7531300 12069000 25863000 5865 2392 5333 50555;50556;50557;50558;50559;50560;50561;50562;50563;50564;50565 39935;39936;39937;39938;39939;39940;39941;39942;39943;39944;39945;39946 39938 12 AWTVLTEYYK Unmodified 1272.639 0.63903946 310 O43252 PAPSS1 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 83.239 80.777 2 0.021802 102093 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 100.02 80.746 2528400 0 0 2528400 0 0 0 0 0 0 0 0 0 0 0 0 5866 310 5334 50566;50567 39947;39948 39947 2 AWVESREK Unmodified 1003.5087 0.50869399 4497 Q9HB71 CACYBP Calcyclin-binding protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 18.331 14.842 2 0.035772 22006 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 117.93 101.39 1428000000 1339200000 38040000 50737000 0 0 0 0 0 0 0 0 0 0 0 0 5867 4497 5335 50568;50569;50570 39949 39949 0 AYAALAALEK Unmodified 1019.5651 0.56514624 2207 Q12906 ILF3 Interleukin enhancer-binding factor 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 4 2 12 3 2 1 1 1 1 1 1 1 1 1 1 1 1 1 68.382 66.496 2 0.0015301 76255 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 105.52 62.274 2272000000 655040000 1014200000 101340000 39355000 30454000 36703000 31008000 26998000 29094000 46017000 49350000 50946000 46100000 44313000 71051000 5868 2207 5336 50571;50572;50573;50574;50575;50576;50577;50578;50579;50580;50581;50582;50583;50584;50585;50586;50587;50588 39950;39951;39952;39953;39954;39955;39956;39957;39958;39959;39960;39961;39962;39963;39964;39965;39966;39967;39968 39968 15 AYAALGLPYQVNQMPTQPQVQAK Oxidation (M) 2531.2842 0.28424371 2171 Q09472 EP300 Histone acetyltransferase p300 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 79.099 79.112 3 4.3549E-06 91657 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 49.768 45.787 94066000 0 0 0 7262300 0 16529000 0 0 14903000 20525000 0 19429000 15418000 0 0 5869 2171 5337 50589;50590;50591;50592;50593;50594 39969;39970;39971;39972;39973;39974 39974 3493 6 AYAALGLPYQVNQMPTQPQVQAK Unmodified 2515.2893 0.28932909 2171 Q09472 EP300 Histone acetyltransferase p300 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 83.201 83.305 3 5.2405E-07 96188 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.432 48.785 46997000 0 0 0 0 3131400 4351700 2120900 5668000 3465400 0 6588200 0 0 6651400 15020000 5870 2171 5337 50595;50596;50597;50598;50599;50600;50601;50602 39975;39976;39977;39978;39979;39980;39981;39982 39977 8 AYAALTDEESRK Unmodified 1352.6572 0.65720872 4887 Q9UGP8 SEC63 Translocation protein SEC63 homolog yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 27.544 27.676 3 0.042735 29960 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 23.514 9.8213 29093000 0 0 0 0 4748900 4217300 4309700 0 0 0 0 10674000 0 5143400 0 5871 4887 5338 50603;50604;50605;50606;50607 39983 39983 1 AYAFHQK Unmodified 863.42899 0.42898711 4430 Q9H788 SH2D4A SH2 domain-containing protein 4A yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 16.141 12.865 2 0.019088 16173 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 114.67 93.121 63767000 49278000 0 14489000 0 0 0 0 0 0 0 0 0 0 0 0 5872 4430 5339 50608;50609 39984;39985 39985 2 AYAFVHTGDNSR Unmodified 1336.616 0.61601261 4944 Q9UJX3 ANAPC7 Anaphase-promoting complex subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 2 1 1 1 1 2 2 1 2 2 2 33.009 33.195 2;3 1.826E-05 35010 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 105.4 87.96 227030000 0 0 0 8867400 11558000 15655000 12984000 18614000 10817000 26462000 20632000 20745000 25567000 17492000 37634000 5873 4944 5340 50610;50611;50612;50613;50614;50615;50616;50617;50618;50619;50620;50621;50622;50623;50624;50625;50626;50627 39986;39987;39988;39989;39990;39991 39986 5 AYALAFAER Unmodified 1010.5185 0.5185304 1667 P51659 HSD17B4 Peroxisomal multifunctional enzyme type 2;(3R)-hydroxyacyl-CoA dehydrogenase;Enoyl-CoA hydratase 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 63.536 63.358 2 0.021923 73072 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 51.854 32.218 4390300 0 0 0 0 2887700 0 0 0 1502600 0 0 0 0 0 0 5874 1667 5341 50628;50629;50630;50631 39992;39993;39994 39994 3 AYAPGGPAYQPVVEAFGTDILHK Unmodified 2400.2114 0.21139634 2230 Q13057 COASY Bifunctional coenzyme A synthase;Phosphopantetheine adenylyltransferase;Dephospho-CoA kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 89.698 89.798 3 2.1021E-05 103989 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.603 44.009 21935000 0 0 0 0 0 1899100 0 0 0 6087600 0 0 0 0 13948000 5875 2230 5342 50632;50633;50634 39995;39996 39996 2 AYAQQLADWAR Unmodified 1291.6309 0.63093439 4974 Q9UKS6 PACSIN3 Protein kinase C and casein kinase substrate in neurons protein 3 yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 69.504 69.505 2 0.0030543 79331 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.841 51.463 6374800 0 0 0 590580 0 0 0 1692700 0 0 0 0 0 0 4091500 5876 4974 5343 50635;50636;50637 39997;39998 39998 2 AYAVGDVEK Unmodified 950.47091 0.4709115 4943 Q9UJX2 CDC23 Cell division cycle protein 23 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 29.454 29.812 2 0.022859 32273 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 78.516 49.178 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5877 4943 5344 50638;50639;50640;50641;50642;50643;50644 39999;40000;40001;40002;40003;40004;40005 40003 7 AYAYLFK Acetyl (Protein N-term) 916.46945 0.46945494 1828 P61019 RAB2A Ras-related protein Rab-2A yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.24 2 1 10 2 1 1 1 1 1 1 1 1 1 1 1 89.482 88.744 2 0.009563 108492 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.377 35.766 267040000 0 125620000 692720 5548900 0 0 9216100 16980000 6458100 16100000 16003000 16059000 12017000 14087000 28263000 5878 1828 5345 50645;50646;50647;50648;50649;50650;50651;50652;50653;50654;50655;50656;50657 40006;40007;40008;40009;40010;40011;40012;40013;40014;40015 40007 10 AYCVLVTGPNMGGK Unmodified 1465.7058 0.70575559 1694 P52701 MSH6 DNA mismatch repair protein Msh6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67.763 66.466 2 1.9022E-05 75336 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 88.056 67.916 99262000 13033000 46226000 0 0 3228200 4160000 2958200 0 3005800 0 6552900 0 4890600 4347600 10860000 5879 1694 5346 50658;50659;50660;50661;50662;50663;50664;50665;50666;50667;50668;50669;50670;50671 40016;40017;40018;40019;40020;40021;40022;40023;40024;40025;40026;40027;40028;40029 40025 13 AYCVLVTGPNMGGK Oxidation (M) 1481.7007 0.70067022 1694 P52701 MSH6 DNA mismatch repair protein Msh6 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 54.087 54.387 2 0.0006271 60922 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 62.303 51.931 32889000 0 0 0 0 0 3099800 2716500 2751200 3124500 0 7211500 6346700 0 3470000 4168300 5880 1694 5346 50672;50673;50674;50675;50676;50677;50678;50679 40030;40031;40032;40033 40032 2741 4 AYDATHLVK Unmodified 1016.5291 0.52909508 929 P10768 ESD S-formylglutathione hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.12 3.89 3 1 4 1 2 1 1 1 1 1 33.903 31.756 2 1.6317E-06 40145 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 164.53 110.98 464850000 28686000 270970000 96574000 0 0 0 0 0 0 0 8233200 22891000 0 10633000 26864000 5881 929 5347 50680;50681;50682;50683;50684;50685;50686;50687 40034;40035;40036;40037;40038;40039;40040;40041;40042 40040 9 AYDGTTYLPGIVGLNNIK Unmodified 1907.9993 0.9992783 2702 Q53GS9 USP39 U4/U6.U5 tri-snRNP-associated protein 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 88.442 88.597 2 0.00023108 102524 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.64 73.124 24860000 0 0 0 0 0 0 0 1665400 2224000 4165700 3641300 2777500 0 1830500 8556000 5882 2702 5348 50688;50689;50690;50691;50692;50693;50694 40043;40044;40045 40044 3 AYDYLVQNTSFANK Unmodified 1632.7784 0.77838649 1243 P29144 TPP2 Tripeptidyl-peptidase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.25 3.34 4 2 2 1 4 1 1 1 72.73 69.832 2;3 6.2219E-30 87763 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145.23 126.42 617400000 0 603910000 3613900 0 0 0 0 0 0 0 0 0 0 2498500 7382100 5883 1243 5349 50695;50696;50697;50698;50699;50700;50701;50702 40046;40047;40048;40049;40050;40051;40052;40053;40054;40055 40048 10 AYEAAASALQIATHTAFVAK Unmodified 2033.0582 0.058190166 1446 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 85.368 85.516 3 1.6352E-07 98866 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.361 59.781 49478000 0 0 0 0 0 2795600 0 5823300 4256700 9411200 6384000 5647800 0 0 15160000 5884 1446 5350 50703;50704;50705;50706;50707;50708;50709 40056;40057;40058;40059;40060 40057 5 AYEDDGDDYSSIMVK Unmodified 1706.6981 0.69814684 4049 Q99707 MTR Methionine synthase yes yes 0 0 0 By MS/MS 2 0 1 1 65.605 59.687 2 0.00070043 76371 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.338 81.449 21149000 0 21149000 0 0 0 0 0 0 0 0 0 0 0 0 0 5885 4049 5351 50710 40061;40062 40062 2 AYEEQLAQLQQK Unmodified 1447.7307 0.73070802 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 2 5 2 1 1 1 1 1 54.724 53.339 2 5.972E-32 67655 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 192.91 165.16 65341000 0 44946000 0 0 0 0 7819500 12576000 0 0 0 0 0 0 0 5886 2291 5352 50711;50712;50713;50714;50715;50716;50717 40063;40064;40065;40066;40067;40068;40069 40066 7 AYEFAER Unmodified 884.40283 0.40283194 2040;1723 P53675;Q00610 CLTCL1;CLTC Clathrin heavy chain 2;Clathrin heavy chain 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.244 32.43 2 0.031655 35557 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 73.616 29.005 529670000 0 0 0 19449000 23583000 38203000 27852000 37748000 21452000 42299000 75071000 45054000 46391000 52341000 100230000 5887 1723;2040 5353 50718;50719;50720;50721;50722;50723;50724;50725;50726;50727;50728;50729 40070;40071;40072 40070 3 AYEKPPEK Unmodified 960.49165 0.49164694 2206 Q12905 ILF2 Interleukin enhancer-binding factor 2 yes yes 0 0 1 By MS/MS 3 0 1 1 9.6272 6.2648 2 0.015342 8483 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 122.13 94.021 60098000 0 60098000 0 0 0 0 0 0 0 0 0 0 0 0 0 5888 2206 5354 50730 40073 40073 1 AYELEQNVVK Unmodified 1191.6136 0.61355299 1493 P46019 PHKA2 Phosphorylase b kinase regulatory subunit alpha, liver isoform yes yes 0 0 0 By MS/MS 10 0 1 1 48.855 49.578 2 0.046383 55004 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.351 43.611 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5889 1493 5355 50731 40074 40074 1 AYEMLSDPVK Unmodified 1151.5533 0.55326092 4021 Q99543 DNAJC2 DnaJ homolog subfamily C member 2;DnaJ homolog subfamily C member 2, N-terminally processed yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 63.34 58.004 2 0.0030867 74701 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.033 63.225 117040000 0 117040000 0 0 0 0 0 0 0 0 0 0 0 0 0 5890 4021 5356 50732;50733 40075 40075 1 AYENAVGILSR Unmodified 1191.6248 0.62478638 2155 Q08378 GOLGA3 Golgin subfamily A member 3 yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 62.32 62.568 2 0.010622 70668 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.35 25.922 15939000 0 0 0 0 0 0 2105600 0 1333300 0 0 0 2585300 3520400 6394800 5891 2155 5357 50734;50735;50736;50737;50738 40076;40077 40076 2 AYEQAGMMLK Unmodified 1140.5308 0.53075134 4059 Q99747 NAPG Gamma-soluble NSF attachment protein yes yes 0 0 0 By MS/MS 2 0 1 1 55.126 49.32 2 0.0031989 63439 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.093 58.287 10856000 0 10856000 0 0 0 0 0 0 0 0 0 0 0 0 0 5892 4059 5358 50739 40078 40078 1 AYERALSIVESEQDK Unmodified 1736.8581 0.85809337 2947 Q6PGP7 TTC37 Tetratricopeptide repeat protein 37 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 66.254 60.227 3 0.0074071 80476 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 32.302 24.051 20218000 12873000 0 7345000 0 0 0 0 0 0 0 0 0 0 0 0 5893 2947 5359 50740;50741 40079 40079 1 AYERNELFLPGR Unmodified 1463.7521 0.75211216 2236 Q13123 IK Protein Red yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 60.176 60.226 3 0.015995 68102 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 38.799 29.262 30297000 0 0 0 0 5863200 0 0 0 0 12328000 0 12106000 0 0 0 5894 2236 5360 50742;50743;50744 40080;40081 40081 2 AYFETEK Unmodified 886.40725 0.40724861 1014 P15170 GSPT1 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 26.607 26.907 2 0.023384 28834 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 88.029 45.554 667540000 0 0 0 0 0 53790000 44106000 32813000 30377000 70815000 74013000 106210000 68019000 71890000 115510000 5895 1014 5361 50745;50746;50747;50748;50749;50750;50751;50752;50753;50754 40082 40082 1 AYFHLLNQIAPK Unmodified 1413.7769 0.77687035 986;2421 P13797;Q14651 PLS3;PLS1 Plastin-3;Plastin-1 no no 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS 8.4 3.2 1 4 1 1 1 1 1 79.121 78.273 3 3.7331E-11 100798 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.79 95.262 70657000 0 22523000 0 0 0 6732200 0 0 2660700 3984600 0 0 0 0 34756000 5896 986;2421 5362 50755;50756;50757;50758;50759 40083;40084 40083 2 AYFILDEFLLGGEVQETSK Unmodified 2158.0834 0.083401864 1783 P56377 AP1S2 AP-1 complex subunit sigma-2 yes yes 0 0 0 By MS/MS 3 0 1 1 99.878 96.331 2 0.0086038 100275 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 53.967 39.091 1285200 1285200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5897 1783 5363 50760 40085 40085 1 AYFLYMYSR Oxidation (M) 1228.5587 0.55868065 4943 Q9UJX2 CDC23 Cell division cycle protein 23 homolog yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 71.896 72.019 2 0.014443 83349 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 51.854 43.436 27439000 0 0 0 0 1350400 3354500 2266800 0 2381700 0 3187300 4616400 2419700 1979500 5882100 5898 4943 5364 50761;50762;50763;50764;50765;50766;50767;50768;50769 40086;40087;40088;40089;40090;40091 40090 6285 6 AYFSTPPAQR Unmodified 1136.5615 0.56145784 5210 Q9Y4U1 MMACHC Methylmalonic aciduria and homocystinuria type C protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 41.589 41.689 2 0.016543 46463 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 64.207 45.883 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5899 5210 5365 50770;50771;50772 40092;40093;40094 40092 3 AYGALTENVTRK Unmodified 1321.699 0.69901396 5119 Q9Y2U5 MAP3K2 Mitogen-activated protein kinase kinase kinase 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 40.994 35.852 3 0.0019887 49434 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.085 57.495 47252000 45398000 0 1854600 0 0 0 0 0 0 0 0 0 0 0 0 5900 5119 5366 50773;50774 40095 40095 1 AYGDRIER Unmodified 978.48829 0.4882929 1002 P14625 HSP90B1 Endoplasmin yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.227 14.389 2 0.04241 13168 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 118.74 74.626 530590000 0 0 0 19595000 15111000 31046000 22546000 17426000 14972000 52618000 54543000 61628000 56293000 49328000 135480000 5901 1002 5367 50775;50776;50777;50778;50779;50780;50781;50782;50783;50784;50785;50786 40096 40096 0 AYGELPEHAK Unmodified 1113.5455 0.54547343 1526 P47813;O14602 EIF1AX;EIF1AY Eukaryotic translation initiation factor 1A, X-chromosomal;Eukaryotic translation initiation factor 1A, Y-chromosomal yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.57 3.85 3 1 3 1 2 1 1 1 1 26.691 24.416 2 0.0030212 32922 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.582 59.79 843810000 102900000 563140000 106300000 0 0 0 0 0 0 0 19397000 0 0 11402000 40677000 5902 1526 5368 50787;50788;50789;50790;50791;50792;50793 40097;40098;40099;40100;40101 40097 4 AYGFSCDGEGVLK Unmodified 1401.6235 0.62346575 4037 Q99622 C12orf57 Protein C10 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 65.369 64.027 2 4.3804E-07 80861 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.78 102.19 432690000 4442000 304410000 1829200 5067500 5335900 5688400 6061100 5933000 5030000 9530800 21613000 13885000 8874300 10982000 24013000 5903 4037 5369 50794;50795;50796;50797;50798;50799;50800;50801;50802;50803;50804;50805;50806;50807;50808;50809 40102;40103;40104 40102 2 AYGLADPSTTGQMSGAR Unmodified 1681.773 0.77298354 5292 Q9Y6Q9 NCOA3 Nuclear receptor coactivator 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 51.565 51.851 2 1.0324E-24 58827 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 104.87 98.626 39390000 0 0 0 0 0 0 3528100 0 5547600 8224000 7372500 0 0 5818800 8898500 5904 5292 5370 50810;50811;50812;50813;50814;50815;50816;50817 40105;40106;40107;40108;40109;40110;40111;40112 40105 8 AYGLADPSTTGQMSGAR Oxidation (M) 1697.7679 0.76789816 5292 Q9Y6Q9 NCOA3 Nuclear receptor coactivator 3 yes yes 0 1 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 41.226 41.598 2 0.0015857 46513 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 46.592 39.989 25791000 0 0 0 0 0 0 3335500 4595800 0 3208200 0 4985100 5444200 0 4222100 5905 5292 5370 50818;50819;50820;50821;50822;50823 40113;40114;40115 40114 6698 3 AYGPGIEPTGNMVK Unmodified 1432.7021 0.70205043 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 57.152 57.033 2 7.5895E-20 64660 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 157.75 122.23 162490000 0 0 0 17285000 22417000 42185000 23679000 21238000 0 35684000 0 0 0 0 0 5906 1124 5371 50824;50825;50826;50827;50828;50829;50830;50831 40116;40117;40118;40119;40120;40121;40122;40123;40124 40119 9 AYGPGIEPTGNMVK Oxidation (M) 1448.697 0.69696505 1124 P21333 FLNA Filamin-A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 2 2 1 1 1 1 1 1 44.261 44.503 2 0.00030015 48814 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.979 53.726 118850000 0 0 0 0 0 17509000 14560000 10230000 9874900 15682000 0 0 13626000 14847000 22516000 5907 1124 5371 50832;50833;50834;50835;50836;50837;50838;50839;50840;50841 40125;40126;40127;40128;40129;40130;40131 40127 1610 6 AYGPGLEK Unmodified 833.42832 0.42831841 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 25.355 25.551 2 0.025413 25778 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.716 28.297 168300000 0 0 0 13567000 7455100 15627000 11342000 16463000 0 15183000 20683000 15619000 12531000 0 39827000 5908 487 5372 50842;50843;50844;50845;50846;50847;50848;50849;50850;50851 40132;40133;40134;40135 40133 4 AYGPYTPQPQPK Unmodified 1345.6667 0.6666512 2212 Q12948 FOXC1 Forkhead box protein C1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.812 39.991 2 0.00015765 44363 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 85.731 78.251 219190000 0 0 0 12231000 13507000 13815000 15030000 17770000 11902000 25650000 22801000 26096000 17326000 12221000 30844000 5909 2212 5373 50852;50853;50854;50855;50856;50857;50858;50859;50860;50861;50862;50863 40136;40137;40138;40139;40140;40141;40142;40143;40144;40145;40146;40147 40144 12 AYGQALAK Unmodified 820.4443 0.44430282 1249 P29401 TKT Transketolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.65 3.66 1 3 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 24.904 24.436 2 0.017106 23700 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.986 53.34 11604000000 1996200000 8376900000 235430000 21259000 9215200 11002000 11556000 11256000 7695200 18014000 153460000 150150000 16067000 136150000 449700000 5910 1249 5374 50864;50865;50866;50867;50868;50869;50870;50871;50872;50873;50874;50875;50876;50877;50878;50879;50880 40148;40149;40150;40151;40152;40153 40148 5 AYGVCFVDTSLGK Unmodified 1415.6755 0.67550132 1694 P52701 MSH6 DNA mismatch repair protein Msh6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 76.476 76.55 2 1.1038E-06 87497 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 102.52 82.737 50817000 0 0 0 0 5587600 5334600 3864300 7703900 0 8034500 0 0 0 7784100 12508000 5911 1694 5375 50881;50882;50883;50884;50885;50886;50887 40154;40155;40156;40157;40158;40159;40160 40159 7 AYHEQLSVAEITNACFEPANQMVK Oxidation (M) 2765.2789 0.27890034 1961;3031;1962 P68363;Q71U36;P0DPH8;P0DPH7;Q6PEY2;P68366 TUBA1B;TUBA1A;TUBA3E;TUBA4A Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-4A chain no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.94 3.84 6 3 8 5 3 1 1 1 1 1 1 1 1 1 80.827 78.934 3 2.5091E-103 97866 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 156.08 141.32 1710900000 356160000 1078800000 195160000 7523500 0 4015600 0 0 4883900 15072000 11396000 5870300 0 4971300 27075000 5912 1961;3031;1962 5376 50888;50889;50890;50891;50892;50893;50894;50895;50896;50897;50898;50899;50900;50901;50902;50903;50904 40161;40162;40163;40164;40165;40166;40167;40168;40169;40170;40171;40172;40173;40174;40175;40176;40177;40178;40179 40162 3153 19 AYHEQLSVAEITNACFEPANQMVK Unmodified 2749.284 0.28398571 1961;3031;1962 P68363;Q71U36;P0DPH8;P0DPH7;Q6PEY2;P68366 TUBA1B;TUBA1A;TUBA3E;TUBA4A Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-4A chain no no 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 6 2 3 4 1 87.345 82.323 2;3 4.3863E-103 103269 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 154.65 148.22 1050900000 387430000 577940000 85567000 0 0 0 0 0 0 0 0 0 0 0 0 5913 1961;3031;1962 5376 50905;50906;50907;50908;50909;50910;50911;50912 40180;40181;40182;40183;40184;40185;40186;40187;40188;40189;40190;40191 40189 11 AYHEQLTVAEITNACFEPANQMVK Oxidation (M) 2779.2946 0.2945504 4093 Q9BQE3 TUBA1C Tubulin alpha-1C chain yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 82.819 78.358 3 1.7837E-97 98532 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 150.36 147.15 339970000 143930000 151130000 44913000 0 0 0 0 0 0 0 0 0 0 0 0 5914 4093 5377 50913;50914;50915;50916;50917 40192;40193;40194;40195 40192 5595 4 AYHEQLTVAEITNACFEPANQMVK Unmodified 2763.2996 0.29963578 4093 Q9BQE3 TUBA1C Tubulin alpha-1C chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 86.404 81.956 3 9.5652E-57 103689 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 127.96 125.09 246570000 141210000 91199000 14166000 0 0 0 0 0 0 0 0 0 0 0 0 5915 4093 5377 50918;50919;50920;50921;50922 40196;40197;40198;40199;40200;40201 40200 6 AYHNSPAYLAYINAK Unmodified 1694.8417 0.84165545 3714 Q969G3 SMARCE1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 67.508 66.926 3 8.9299E-05 89952 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.815 65.407 207980000 44530000 0 0 0 8131300 0 8472700 13274000 14097000 20011000 16905000 19073000 13986000 13925000 35579000 5916 3714 5378 50923;50924;50925;50926;50927;50928;50929;50930;50931;50932;50933 40202;40203;40204;40205;40206;40207;40208;40209;40210;40211;40212;40213;40214;40215 40208 12 AYHSFLVEPISCHAWNK Acetyl (Protein N-term) 2099.9887 0.98873039 256 O15143 ARPC1B Actin-related protein 2/3 complex subunit 1B yes yes 1 0 0 By MS/MS By MS/MS 2 0 2 1 1 89.571 83.069 3 0.00078235 105877 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.842 79.738 30944000 13832000 17112000 0 0 0 0 0 0 0 0 0 0 0 0 0 5917 256 5379 50934;50935 40216;40217 40217 0 AYHSGYGAHGSK Acetyl (Protein N-term) 1275.5632 0.56324876 618 O95070 YIF1A Protein YIF1A yes yes 1 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 3 6 2 1 1 1 1 1 1 1 13.978 12.879 2;3 0.0015385 18360 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.772 77.768 183620000 121370000 0 29770000 3155000 0 0 5074700 0 5273700 7080100 0 0 0 5253700 6640300 5918 618 5380 50936;50937;50938;50939;50940;50941;50942;50943;50944 40218;40219;40220;40221;40222 40221 3 AYIASAGADALAK Unmodified 1220.6401 0.6401021 2225 Q13033 STRN3 Striatin-3 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 55.86 50.046 2 0.0064767 64875 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.439 41.609 92998000 0 92998000 0 0 0 0 0 0 0 0 0 0 0 0 0 5919 2225 5381 50945;50946 40223;40224 40223 2 AYIDSFR Unmodified 870.42357 0.42356738 1009 P14868 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 47.873 48.029 2 0.02407 53870 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 100.07 10.393 162650000 0 0 0 9037000 9272900 12977000 13440000 12052000 8968200 13492000 22541000 20300000 15381000 0 25192000 5920 1009 5382 50947;50948;50949;50950;50951;50952;50953;50954;50955;50956;50957 40225;40226;40227;40228 40227 4 AYILNLVK Unmodified 932.5695 0.56950333 1642 P50991 CCT4 T-complex protein 1 subunit delta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.762 76.822 2 0.019843 88842 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 63.287 42.629 1636500000 0 0 0 50893000 62950000 162870000 90623000 116680000 74867000 187610000 160630000 151910000 115530000 135410000 326540000 5921 1642 5383 50958;50959;50960;50961;50962;50963;50964;50965;50966;50967;50968;50969 40229;40230;40231;40232;40233;40234;40235 40234 7 AYINTISSLK Unmodified 1108.6128 0.61282471 4077 Q99996 AKAP9 A-kinase anchor protein 9 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 69.276 62.184 2 0.0014533 79893 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.87 75 24799000 12194000 12605000 0 0 0 0 0 0 0 0 0 0 0 0 0 5922 4077 5384 50970;50971 40236;40237 40236 2 AYIQENLELVEK Unmodified 1447.7559 0.75586013 953 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 2 3 1 76.781 72.14 2 6.4611E-14 90811 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 133.23 78.81 846990000 55943000 773970000 17073000 0 0 0 0 0 0 0 0 0 0 0 0 5923 953 5385 50972;50973;50974;50975;50976;50977 40238;40239;40240;40241;40242;40243;40244;40245 40238 7 AYLAGSIK Unmodified 821.4647 0.46470391 3488 Q8TCE6 FAM45A Protein FAM45A yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 42.753 36.809 2 0.043506 50317 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.198 6.4828 104600000 38094000 66501000 0 0 0 0 0 0 0 0 0 0 0 0 0 5924 3488 5386 50978;50979 40246 40246 1 AYLAYCTPGSDGQAATLK Unmodified 1885.888 0.88801329 4330 Q9H0J9 PARP12 Poly [ADP-ribose] polymerase 12 yes yes 0 0 0 By MS/MS 2 0 1 1 68.899 63 2 1.2757E-09 80376 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.12 110.21 31731000 0 31731000 0 0 0 0 0 0 0 0 0 0 0 0 0 5925 4330 5387 50980 40247 40247 1 AYLEEECPATLR Unmodified 1450.6762 0.67622961 1185 P25311 AZGP1 Zinc-alpha-2-glycoprotein yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 55.779 55.885 2 0.00064614 63188 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 91.584 84.639 41341000 0 0 0 21005000 1923500 1770700 0 0 0 2374000 3347500 4973500 0 2855100 3091700 5926 1185 5388 50981;50982;50983;50984;50985;50986;50987;50988 40248;40249;40250;40251;40252 40250 5 AYLEEECPATLRK Unmodified 1578.7712 0.77119262 1185 P25311 AZGP1 Zinc-alpha-2-glycoprotein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.64 1.67 1 21 1 2 1 2 1 1 2 2 2 2 2 2 2 45.206 45.223 2;3 1.236E-09 49445 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 113.24 108.35 845850000 0 0 3007600 312430000 19817000 40296000 33200000 17042000 27199000 40594000 82094000 111530000 45025000 57130000 56490000 5927 1185 5389 50989;50990;50991;50992;50993;50994;50995;50996;50997;50998;50999;51000;51001;51002;51003;51004;51005;51006;51007;51008;51009;51010 40253;40254;40255;40256;40257;40258;40259;40260;40261;40262;40263;40264;40265;40266;40267;40268;40269;40270;40271;40272;40273 40258 21 AYLESFYK Unmodified 1019.4964 0.49639797 1848 P61421 ATP6V0D1 V-type proton ATPase subunit d 1 yes yes 0 0 0 By MS/MS 2 0 1 1 69.578 63.71 2 0.022229 81228 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.753 65.904 21424000 0 21424000 0 0 0 0 0 0 0 0 0 0 0 0 0 5928 1848 5390 51011 40274 40274 1 AYLGDTSEAK Unmodified 1053.4979 0.49785453 2994 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.409 22.613 2 0.0017713 23067 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 95.502 83.78 270930000 0 0 0 12151000 11957000 14252000 16527000 12165000 16261000 24807000 31503000 38145000 28979000 28710000 35469000 5929 2994 5391 51012;51013;51014;51015;51016;51017;51018;51019;51020;51021;51022;51023 40275;40276;40277;40278;40279;40280;40281;40282 40279 8 AYLLQNFNEEGTTEK Unmodified 1755.8315 0.83154427 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 70.963 71.028 2 2.3998E-07 80858 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 104.32 80.719 57964000 0 0 0 2692400 3127600 7215300 3063100 3703200 0 4084200 5264000 6786600 5913700 6800300 9313200 5930 2775 5392 51024;51025;51026;51027;51028;51029;51030;51031;51032;51033;51034 40283;40284;40285;40286;40287;40288;40289;40290;40291;40292;40293;40294;40295 40292 13 AYLPQELLGK Unmodified 1130.6336 0.63356015 1652 P51398 DAP3 28S ribosomal protein S29, mitochondrial yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 77.45 77.34 2 0.034866 88750 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.692 54.452 40401000 0 0 0 4682200 6879900 0 0 0 0 0 0 0 11652000 0 17187000 5931 1652 5393 51035;51036;51037;51038 40296 40296 0 AYLQLGINEK Unmodified 1147.6237 0.62372375 3711 Q93100 PHKB Phosphorylase b kinase regulatory subunit beta yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 71.104 65.924 2 0.0024895 83853 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.15 84.859 24718000 0 24718000 0 0 0 0 0 0 0 0 0 0 0 0 0 5932 3711 5394 51039;51040 40297 40297 1 AYLQQLR Unmodified 890.4974 0.49740102 258 O15145 ARPC3 Actin-related protein 2/3 complex subunit 3 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By matching By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 41.16 41.417 2 0.023434 44804 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.306 57.052 215190000 0 0 0 13711000 0 11005000 0 12311000 10754000 16645000 25967000 34429000 16674000 21125000 52574000 5933 258 5395 51041;51042;51043;51044;51045;51046;51047;51048;51049;51050 40298;40299 40298 2 AYLTEENGQIAVFDATNTTR Unmodified 2213.06 0.060040659 433 O60825 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 2 2 2 2 2 2 78.932 78.988 2;3 7.1148E-174 91304 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 261.35 249.08 197700000 0 0 0 7493100 17866000 20971000 10264000 15340000 17759000 30012000 19754000 20028000 0 8391900 29822000 5934 433 5396 51051;51052;51053;51054;51055;51056;51057;51058;51059;51060;51061;51062;51063;51064;51065;51066;51067;51068;51069;51070;51071;51072 40300;40301;40302;40303;40304;40305;40306;40307;40308;40309;40310;40311;40312;40313 40302 11 AYLVPENFR Unmodified 1107.5713 0.57129425 3149 Q86UK7 ZNF598 Zinc finger protein 598 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.978 68.058 2 0.0054582 78486 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 77.674 63.75 233940000 0 0 0 12657000 12407000 13258000 15882000 17814000 13528000 22850000 22099000 31860000 17672000 21620000 32290000 5935 3149 5397 51073;51074;51075;51076;51077;51078;51079;51080;51081;51082;51083;51084 40314;40315;40316;40317;40318;40319;40320;40321;40322;40323;40324;40325;40326 40326 12 AYMRNPSSSVPPPSAGSVK Unmodified 1930.9571 0.95709591 3573 Q8WWI1 LMO7 LIM domain only protein 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 42.134 42.38 3 0.0015558 46880 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 40.179 30.391 51379000 0 0 0 0 3867000 4182600 4655900 0 3551900 8070000 5898900 7675100 6134700 0 7343000 5936 3573 5398 51085;51086;51087;51088;51089;51090;51091;51092;51093 40327;40328;40329;40330;40331;40332;40333;40334 40333 7 AYPAAITILETAQK Unmodified 1488.8188 0.81879474 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 84.173 84.238 2 0.00032476 96574 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 92.611 71.741 102230000 0 0 0 4555400 8164500 5996600 6192700 6446900 5127500 9322900 8668300 15721000 7294000 7939100 16804000 5937 619 5399 51094;51095;51096;51097;51098;51099;51100;51101;51102;51103;51104;51105 40335;40336;40337;40338;40339;40340;40341;40342;40343;40344;40345;40346;40347 40342 12 AYPLADAHLTK Unmodified 1198.6346 0.63462279 1770 P55769 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.19 3.31 5 1 20 2 3 1 2 1 2 2 2 2 2 2 1 2 2 49.494 48.18 2;3 0.0043673 66864 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.82 67.244 1430300000 373130000 525690000 236980000 19139000 11204000 33716000 23348000 6222900 17115000 47275000 38912000 0 10572000 30399000 56588000 5938 1770 5400 51106;51107;51108;51109;51110;51111;51112;51113;51114;51115;51116;51117;51118;51119;51120;51121;51122;51123;51124;51125;51126;51127;51128;51129;51130;51131 40348;40349;40350;40351;40352;40353;40354;40355;40356;40357 40352 6 AYPNNYETMK Unmodified 1229.5387 0.53867349 2945 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 34.015 33.807 2 0.0060229 37091 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 76.827 71.861 392640000 0 137540000 0 7325300 10886000 10555000 9501700 11882000 7577900 22611000 37183000 47093000 22061000 26268000 42152000 5939 2945 5401 51132;51133;51134;51135;51136;51137;51138;51139;51140;51141;51142;51143;51144 40358;40359;40360;40361;40362;40363;40364;40365 40362 7 AYPNNYETMK Oxidation (M) 1245.5336 0.53358811 2945 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 2 2 1 1 1 1 1 2 21.746 21.956 2 0.0019656 22353 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 78.149 69.204 89155000 0 0 0 3648000 6659200 0 9619100 4246600 0 0 12242000 12636000 13072000 8351600 18681000 5940 2945 5401 51145;51146;51147;51148;51149;51150;51151;51152;51153;51154;51155;51156 40366;40367;40368;40369;40370 40370 4578 4 AYPTSVCFSPDGK Unmodified 1427.6391 0.63911582 3762 Q96BP3 PPWD1 Peptidylprolyl isomerase domain and WD repeat-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 64.678 58.76 2 5.9327E-21 75269 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.02 127.44 113410000 0 113410000 0 0 0 0 0 0 0 0 0 0 0 0 0 5941 3762 5402 51157 40371 40371 1 AYQDMDIDK Unmodified 1097.4699 0.46992522 4241 Q9BY43 CHMP4A Charged multivesicular body protein 4a yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 33.991 34.381 2 0.013227 36769 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 60.118 49.253 9086000 0 0 0 0 0 0 0 0 0 0 4951500 0 0 4134500 0 5942 4241 5403 51158;51159;51160 40372;40373 40373 2 AYQDQISPVPGAPK Unmodified 1469.7514 0.75144346 3728 Q969V6 MKL1 MKL/myocardin-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 52.288 52.503 2 0.00016935 59444 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 81.865 64.001 65762000 0 0 0 0 2841500 4569100 4329900 5647000 3054700 6939700 5681800 5623000 7832900 6667600 12575000 5943 3728 5404 51161;51162;51163;51164;51165;51166;51167;51168;51169;51170;51171 40374;40375;40376;40377;40378;40379;40380;40381;40382;40383;40384;40385;40386 40375 11 AYQEGRLQK Unmodified 1091.5724 0.57235688 2641 Q16881 TXNRD1 Thioredoxin reductase 1, cytoplasmic yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 14.555 10.874 2 0.03344 16090 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 109.11 63.43 208550000 197030000 11520000 0 0 0 0 0 0 0 0 0 0 0 0 0 5944 2641 5405 51172;51173 40387 40387 1 AYQHGGVTGLSQY Unmodified 1379.647 0.64697839 3683 Q92900 UPF1 Regulator of nonsense transcripts 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 47.878 47.91 2 1.1657E-06 54074 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 92.538 75.701 142490000 0 0 0 9853700 10617000 0 16829000 16700000 0 30795000 0 0 0 17744000 39953000 5945 3683 5406 51174;51175;51176;51177;51178;51179;51180;51181;51182 40388;40389;40390;40391;40392 40388 4 AYQIDPTLRK Unmodified 1203.6612 0.66117189 3320 Q8N3C0 ASCC3 Activating signal cointegrator 1 complex subunit 3 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 41.831 42.033 3 0.039722 46957 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 23.012 18.219 26767000 0 0 0 0 4317900 0 0 0 2987300 0 0 9914100 5119000 4428200 0 5946 3320 5407 51183;51184;51185;51186;51187 40393 40393 1 AYQQALSR Unmodified 935.48248 0.48247924 4020 Q99541 PLIN2 Perilipin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.077 20.278 2 0.0059797 20744 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 104.75 53.781 144000000 0 0 0 6708900 10140000 8739600 12088000 11996000 6806400 18750000 13898000 18637000 14669000 8884800 12678000 5947 4020 5408 51188;51189;51190;51191;51192;51193;51194;51195;51196;51197;51198;51199 40394;40395;40396;40397;40398;40399;40400;40401;40402;40403;40404 40400 10 AYQQSEAYK Unmodified 1086.4982 0.49818889 4800 Q9P0W2 HMG20B SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.721 13.884 2 0.0038397 13404 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 112.17 75.077 141990000 0 0 0 7730100 8227600 7640800 8913100 12358000 8992900 13416000 13708000 15211000 12725000 14060000 19013000 5948 4800 5409 51200;51201;51202;51203;51204;51205;51206;51207;51208;51209;51210;51211 40405;40406;40407;40408;40409;40410;40411;40412;40413;40414;40415;40416;40417 40414 13 AYQSTFTGETNTPYSK Unmodified 1793.8108 0.81080883 202 O14686 KMT2D Histone-lysine N-methyltransferase 2D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 49.007 48.559 2 2.8012E-45 60763 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 156.69 140.43 100880000 0 31877000 0 0 0 0 0 5398700 6263300 6452700 6545900 0 11945000 10154000 22246000 5949 202 5410 51212;51213;51214;51215;51216;51217;51218;51219;51220;51221 40418;40419;40420;40421;40422;40423;40424;40425;40426;40427 40419 10 AYSDPSTGEPATYGELQQR Unmodified 2068.9338 0.93377751 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 2 2 2 2 1 1 53.277 53.043 2;3 3.5604E-17 60337 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 95.631 80.244 31509000 0 0 0 7750100 9260500 0 8499500 5999300 0 0 0 0 0 0 0 5950 2501 5411 51222;51223;51224;51225;51226;51227;51228;51229;51230;51231 40428;40429;40430;40431;40432;40433;40434 40431 6 AYSDQAIVNLLK Unmodified 1333.7242 0.72416608 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 84.02 84.031 2 9.4361E-05 97560 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 104.17 93.338 326090000 0 0 0 12540000 30795000 43773000 0 0 0 62233000 49103000 0 24379000 36464000 66803000 5951 3641 5412 51232;51233;51234;51235;51236;51237;51238;51239 40435;40436;40437;40438;40439;40440;40441 40440 7 AYSEAHEISK Unmodified 1133.5353 0.53530267 1869 P61981 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 14.177 13.451 2 1.9831E-08 17244 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 155.84 92.425 2224400000 117270000 1521100000 177710000 10727000 6935600 11395000 9514200 8880400 9655400 25752000 62581000 60791000 24029000 44020000 134060000 5952 1869 5413 51240;51241;51242;51243;51244;51245;51246;51247;51248;51249;51250;51251;51252;51253;51254;51255 40442;40443;40444;40445;40446;40447;40448;40449;40450;40451;40452;40453;40454;40455;40456;40457;40458 40446 16 AYSIVIR Unmodified 820.48069 0.48068833 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 52.508 52.626 2 0.023669 58813 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 84.359 39.386 82760000 0 0 0 4038200 5750900 9127700 0 0 3824800 10861000 0 12293000 9181500 8891200 18792000 5953 619 5414 51256;51257;51258;51259;51260;51261;51262;51263;51264 40459;40460;40461;40462 40462 4 AYSNWPTYPQLYVK Unmodified 1728.8512 0.8511575 570 O76003 GLRX3 Glutaredoxin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 83.067 82.757 2 2.8716E-29 102717 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 172.56 156.18 183990000 0 111530000 0 0 0 9249600 1798900 3771100 1361800 8842700 4476300 3394800 3595300 6842900 29131000 5954 570 5415 51265;51266;51267;51268;51269;51270;51271;51272;51273;51274;51275 40463;40464;40465;40466;40467;40468;40469;40470 40466 8 AYSPEDLEERK Unmodified 1335.6307 0.63065962 3586 Q8WXD5 GEMIN6 Gem-associated protein 6 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By matching By matching 6.71 3.81 2 1 4 2 1 1 1 1 1 37.969 36.033 3 0.0085136 46516 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 54.7 45.97 143470000 0 110070000 5147200 5455100 0 6368400 5141400 0 0 11295000 0 0 0 0 0 5955 3586 5416 51276;51277;51278;51279;51280;51281;51282 40471;40472;40473 40472 3 AYSPELIVHPVLDSPNAVHEVEK Unmodified 2542.3068 0.30675329 3235 Q8IW45 CARKD ATP-dependent (S)-NAD(P)H-hydrate dehydratase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 4 1 1 2 82.973 78.509 3;4 0.0024693 99222 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 32.567 19.509 39466000 8093800 20424000 10948000 0 0 0 0 0 0 0 0 0 0 0 0 5956 3235 5417 51283;51284;51285;51286 40474;40475;40476;40477 40474 4 AYSSFGGGR Unmodified 900.40898 0.40897995 2490 Q15056 EIF4H Eukaryotic translation initiation factor 4H yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 21.392 21.666 2 0.0083077 22407 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 69.998 17.767 152240000 0 0 0 0 5360400 0 7489100 0 5895700 12495000 20213000 28020000 10383000 27242000 35142000 5957 2490 5418 51287;51288;51289;51290;51291;51292;51293;51294;51295 40478;40479;40480;40481 40480 3 AYSSNEVEK Unmodified 1025.4666 0.46655441 4345 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.452 11.572 2 0.015842 10021 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.047 27.671 33571000 0 0 0 1443700 1666400 3208600 2221300 2116100 2281000 2821100 0 4026800 3426700 4132700 6226900 5958 4345 5419 51296;51297;51298;51299;51300;51301;51302;51303;51304;51305;51306 40482;40483;40484 40484 3 AYTGFSSNSER Unmodified 1217.5313 0.53127993 275 O15355 PPM1G Protein phosphatase 1G yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.456 26.655 2 0.0053741 28089 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 71.451 64.812 195300000 0 0 0 11172000 9679600 11788000 9361300 11324000 7610500 13603000 24300000 33051000 18224000 15176000 30016000 5959 275 5420 51307;51308;51309;51310;51311;51312;51313;51314;51315;51316;51317;51318 40485;40486;40487;40488;40489;40490;40491;40492;40493;40494;40495;40496 40490 11 AYTGFSSNSERGTEAGQVGEPGIPTGEAGPSCSSASDK Unmodified 3744.6446 0.64455472 275 O15355 PPM1G Protein phosphatase 1G yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.8 3.92 6 9 2 2 2 1 1 1 1 1 1 1 1 1 64.533 62.162 3;4 1.7178E-74 79101 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.54 100.59 160950000 19162000 73531000 18638000 2223800 2684300 3545600 0 0 2616000 7566200 7991500 0 6318900 6232800 10441000 5960 275 5421 51319;51320;51321;51322;51323;51324;51325;51326;51327;51328;51329;51330;51331;51332;51333 40497;40498;40499;40500;40501;40502;40503;40504;40505;40506;40507;40508 40499 12 AYTNFDAER Unmodified 1085.4778 0.47778779 840 P07355;A6NMY6 ANXA2;ANXA2P2 Annexin A2;Putative annexin A2-like protein yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 34.092 34.28 2 0.014237 38204 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 58.596 58.596 18666000 0 0 0 7182500 0 0 0 0 0 3845900 0 0 0 2881800 4755900 5961 840 5422 51334;51335;51336;51337 40509 40509 1 AYTNFDAERDALNIETAIK Unmodified 2154.0593 0.059312378 840 P07355;A6NMY6 ANXA2;ANXA2P2 Annexin A2;Putative annexin A2-like protein yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.82 3.83 4 2 5 2 3 1 1 1 1 1 1 84.122 81.683 3 4.4216E-31 101597 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.22 109.18 1562300000 159410000 1307000000 36078000 2269800 0 0 0 3419500 0 11777000 9222400 0 0 0 33142000 5962 840 5423 51338;51339;51340;51341;51342;51343;51344;51345;51346;51347;51348 40510;40511;40512;40513;40514;40515;40516;40517;40518;40519;40520 40510 11 AYTSPLIDMFNNPATAAPNSQR Unmodified 2378.1325 0.1324941 4906 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 88.98 89.123 3 0.044276 103167 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 18.251 13.813 2163700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2163700 5963 4906 5424 51349 40521 40521 1 AYTTGSPGSR Unmodified 995.46722 0.46722311 3008 Q6ZS17 FAM65A Protein FAM65A yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 10.404 10.546 2 0.0082748 8421 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.436 35.805 17776000 0 0 0 1070700 0 2533700 1998800 0 1229500 1959800 0 2513500 2474100 1170800 2825400 5964 3008 5425 51350;51351;51352;51353;51354;51355;51356;51357;51358 40522;40523;40524;40525;40526;40527 40524 6 AYVDDTPAEQMK Oxidation (M) 1382.6024 0.60239596 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.31 2.4 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 32.904 33.494 2 1.3726E-10 92978 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 126.31 108.05 411840000 56269000 0 0 17067000 18301000 30483000 28614000 19240000 22261000 27232000 42508000 47741000 23482000 34833000 43805000 5965 848 5426 51359;51360;51361;51362;51363;51364;51365;51366;51367;51368;51369;51370;51371 40528;40529;40530;40531;40532;40533;40534;40535;40536;40537;40538;40539;40540;40541;40542 40533 1051 15 AYVDDTPAEQMK Unmodified 1366.6075 0.60748134 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.43 3.99 1 2 1 3 2 2 1 1 1 51.358 49.853 2 3.197E-08 44765 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 128.27 118.49 750070000 56916000 450880000 0 43180000 0 0 0 0 0 0 0 86499000 0 0 112600000 5966 848 5426 51372;51373;51374;51375;51376;51377;51378 40543;40544;40545;40546;40547;40548;40549 40548 7 AYVDLLR Unmodified 848.4756 0.47560295 2895 Q6N069 NAA16 N-alpha-acetyltransferase 16, NatA auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 64.117 64.136 2 0.02342 73099 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 86.086 58.77 139100000 0 0 0 3250300 9182700 8172400 11695000 14622000 6751800 18210000 25864000 41355000 0 0 0 5967 2895 5427 51379;51380;51381;51382;51383;51384;51385;51386;51387 40550;40551;40552;40553 40551 3 AYVEANQMLGDLIK Unmodified 1563.7967 0.79667909 951 P11498 PC Pyruvate carboxylase, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 91.896 86.985 2 1.0317E-39 108129 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 166.14 142.54 78628000 0 78628000 0 0 0 0 0 0 0 0 0 0 0 0 0 5968 951 5428 51388 40554;40555 40555 2 AYVEQIEK Unmodified 978.50221 0.50221163 4126 Q9BSJ2 TUBGCP2 Gamma-tubulin complex component 2 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 31.384 31.729 2 0.0099307 33488 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.296 37.488 34388000 0 0 0 0 0 0 3218900 3176400 1916600 0 0 9112000 4617500 4157300 8189600 5969 4126 5429 51389;51390;51391;51392;51393;51394;51395 40556;40557;40558 40556 3 AYVHEFK Unmodified 892.4443 0.44430282 4394 Q9H4A4 RNPEP Aminopeptidase B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 27.844 23.533 2 0.012128 31504 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.19 51.471 1040100000 602000000 114480000 323640000 0 0 0 0 0 0 0 0 0 0 0 0 5970 4394 5430 51396;51397;51398 40559;40560;40561;40562;40563 40560 5 AYVPALQMAFK Unmodified 1237.6529 0.65291539 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 83.272 83.369 2 0.0010376 96058 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.498 77.37 85295000 0 0 0 0 2481800 3215800 1312100 7713300 0 8649300 8459100 6736700 5131100 9088300 32508000 5971 1986 5431 51399;51400;51401;51402;51403;51404;51405;51406;51407;51408 40564;40565;40566;40567;40568;40569;40570 40566 7 AYVPALQMAFK Oxidation (M) 1253.6478 0.64783001 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 75.427 75.475 2 0.012262 87385 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 43.448 23.662 43556000 0 0 0 0 12562000 0 0 17128000 0 0 0 0 0 0 13866000 5972 1986 5431 51409;51410;51411;51412 40571;40572;40573;40574 40574 3211 3 AYVRDPYALDLIDK Unmodified 1650.8617 0.86172219 1637 P50750 CDK9 Cyclin-dependent kinase 9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77.403 77.037 3 0.00012713 88344 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.428 70.943 156920000 0 5159600 15834000 3026100 2264000 12005000 6841900 9376700 9812000 13472000 8496400 13607000 8756900 14926000 33338000 5973 1637 5432 51413;51414;51415;51416;51417;51418;51419;51420;51421;51422;51423;51424;51425;51426 40575;40576;40577;40578;40579 40575 5 AYVRLAPDYDALDVANK Unmodified 1892.9632 0.96322715 1908 P62750 RPL23A 60S ribosomal protein L23a yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 3 2 1 79.921 74.792 2;3 5.1238E-13 95773 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.98 98.056 519610000 277360000 134510000 107740000 0 0 0 0 0 0 0 0 0 0 0 0 5974 1908 5433 51427;51428;51429;51430;51431;51432 40580;40581;40582;40583;40584;40585;40586 40583 6 AYVSLFMR Oxidation (M) 1001.5004 0.50043749 2451;2201 Q12873;Q14839 CHD3;CHD4 Chromodomain-helicase-DNA-binding protein 3;Chromodomain-helicase-DNA-binding protein 4 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.611 67.693 2 0.011855 77641 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 64.803 44.321 140400000 0 0 0 12545000 7182100 11986000 10107000 13356000 6633300 13098000 11804000 16457000 13479000 8175800 15573000 5975 2201;2451 5434 51433;51434;51435;51436;51437;51438;51439;51440;51441;51442;51443;51444 40587;40588;40589;40590;40591;40592;40593;40594;40595 40587 3572 9 AYVSTLMGVPGR Oxidation (M) 1265.6438 0.64380726 141 O00303 EIF3F Eukaryotic translation initiation factor 3 subunit F yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 54.839 55.226 2 2.8504E-05 61700 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.629 70.3 55252000 0 0 0 0 0 8366300 0 0 0 0 8660700 15901000 0 7923400 14400000 5976 141 5435 51445;51446;51447;51448;51449 40596;40597;40598;40599 40597 190 4 AYVSTLMGVPGR Unmodified 1249.6489 0.64889264 141 O00303 EIF3F Eukaryotic translation initiation factor 3 subunit F yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.28 70.348 2 4.2707E-05 81706 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 108.98 85.549 83184000 0 0 0 3927400 2549700 9481700 0 6121600 2950700 7732700 8064800 12311000 5865100 5899600 18280000 5977 141 5435 51450;51451;51452;51453;51454;51455;51456;51457;51458;51459;51460;51461 40600;40601;40602;40603;40604;40605;40606;40607;40608;40609;40610;40611;40612;40613 40611 14 AYVWDNNK Unmodified 1008.4665 0.46649483 2231 Q13085 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 42.942 36.998 2 0.012142 48333 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.77 91.9 120400000 4198000 116200000 0 0 0 0 0 0 0 0 0 0 0 0 0 5978 2231 5436 51462;51463 40614 40614 1 AYYALNAQPSAEELSK Unmodified 1753.8523 0.85227972 1389 P37275 ZEB1 Zinc finger E-box-binding homeobox 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By matching 9 2.65 1 7 1 1 1 1 1 1 1 1 65.668 65.043 2 1.6377E-72 81761 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 194.96 183.9 75804000 0 54427000 0 2116000 0 2409100 3088800 0 0 2723000 2585800 3894700 0 0 4559900 5979 1389 5437 51464;51465;51466;51467;51468;51469;51470;51471 40615;40616;40617 40617 3 AYYEFREEAYHSR Unmodified 1719.7641 0.76413341 2645 Q1KMD3 HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 2 1 1 2 2 2 1 42.604 42.973 3;4 0.0016881 47382 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 58.32 48.475 182290000 0 0 0 0 0 11642000 0 0 16134000 4206000 5303700 56217000 30582000 11894000 46315000 5980 2645 5438 51472;51473;51474;51475;51476;51477;51478;51479;51480;51481;51482;51483 40618;40619;40620;40621;40622;40623 40623 6 AYYGNINFFGGPSNTSVK Unmodified 1934.9163 0.91627696 1782 P56282 POLE2 DNA polymerase epsilon subunit 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 92.173 85.66 3 0.017365 106102 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 29.58 20.723 43739000 6929300 36810000 0 0 0 0 0 0 0 0 0 0 0 0 0 5981 1782 5439 51484;51485 40624 40624 1 AYYPAVEQK Unmodified 1067.5288 0.52876073 4187 Q9BVI0 PHF20 PHD finger protein 20 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 35.149 35.43 2 0.0071283 38663 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 73.248 39.698 36073000 0 0 0 0 0 4143200 3691100 0 0 6567900 7555500 0 0 0 14115000 5982 4187 5440 51486;51487;51488;51489;51490 40625;40626;40627 40627 3 AYYQRSDGSLAPEK Unmodified 1583.758 0.7579854 2052 Q01415 GALK2 N-acetylgalactosamine kinase yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 35.741 30.839 3 0.0092407 42893 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.797 32.444 17659000 6762100 0 10897000 0 0 0 0 0 0 0 0 0 0 0 0 5983 2052 5441 51491;51492 40628 40628 1 CAADLGLNK Unmodified 960.46987 0.46986564 1599 P49773 HINT1 Histidine triad nucleotide-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.71 3.81 2 1 4 1 2 1 1 1 1 33.395 31.451 2 2.414E-05 33837 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 149.4 93.797 660550000 10684000 344540000 0 0 0 0 0 0 0 0 67130000 50339000 0 47666000 140190000 5984 1599 5442 51493;51494;51495;51496;51497;51498;51499 40629;40630;40631;40632;40633;40634 40630 4 CAAGLAELAARK Unmodified 1229.655 0.65504065 2232 Q13098 GPS1 COP9 signalosome complex subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching 7 3.87 3 5 2 1 1 1 1 1 1 50.059 47.649 2;3 9.785E-15 66879 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 125.74 115.43 102780000 85469000 0 1346200 1767600 0 0 0 1840800 0 0 3526200 0 0 4157900 4668000 5985 2232 5443 51500;51501;51502;51503;51504;51505;51506;51507 40635;40636;40637 40635 2 CAAVDVEPPSK Unmodified 1171.5543 0.55432356 2475 Q15020 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes yes 0 0 0 By MS/MS 10 0 1 1 35.674 35.222 2 0.010919 39169 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 66.692 48.252 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5986 2475 5444 51508 40638 40638 1 CADDSETANYISAHTK Unmodified 1781.7526 0.75264203 650 O95376 ARIH2 E3 ubiquitin-protein ligase ARIH2 yes yes 0 0 0 By MS/MS 3 0 1 1 42.458 37.72 3 0.0076792 46842 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 24.455 23.268 6473900 0 6473900 0 0 0 0 0 0 0 0 0 0 0 0 0 5987 650 5445 51509 40639 40639 1 CADLSLSPIYPAAR Unmodified 1532.7657 0.76571331 1081 P18858 LIG1 DNA ligase 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 78.181 78.179 2 1.3995E-20 90261 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 143.89 128.62 13923000 0 0 0 0 0 13923000 0 0 0 0 0 0 0 0 0 5988 1081 5446 51510;51511 40640;40641 40640 2 CAEEAQLISSLK Unmodified 1347.6704 0.67041595 1457 P42566 EPS15 Epidermal growth factor receptor substrate 15 yes yes 0 0 0 By MS/MS 2 0 1 1 75.145 70.204 2 0.0044627 87874 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.441 67.816 70542000 0 70542000 0 0 0 0 0 0 0 0 0 0 0 0 0 5989 1457 5447 51512 40642 40642 1 CAESLQPVAAAVEER Unmodified 1628.7828 0.78281994 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 65.469 65.414 2 0.00028035 75054 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 91.937 67.951 34505000 0 0 0 1915900 3006700 5780700 0 0 0 5856100 7864600 10081000 0 0 0 5990 3443 5448 51513;51514;51515;51516;51517;51518 40643 40643 0 CAGNEDIITLR Unmodified 1260.6132 0.61323542 959 P12004 PCNA Proliferating cell nuclear antigen yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.796 58.909 2 1.1105E-73 66168 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 198.72 125.46 118150000 0 0 0 6077400 2226200 2737500 2571300 3800900 3836000 4878000 19693000 12886000 6972200 10406000 42061000 5991 959 5449 51519;51520;51521;51522;51523;51524;51525;51526;51527;51528;51529;51530 40644;40645;40646;40647;40648;40649;40650;40651;40652;40653;40654;40655;40656 40648 13 CAGNEDIITLRAEDNADTLALVFEAPNQEK Unmodified 3316.5881 0.58814946 959 P12004 PCNA Proliferating cell nuclear antigen yes yes 0 0 1 By MS/MS 2 0 1 1 96.669 88.538 3 1.2245E-66 114352 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 114.98 111.29 37052000 37052000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5992 959 5450 51531 40657;40658 40657 2 CAHIEAK Unmodified 827.39597 0.39597242 4057 Q99733 NAP1L4 Nucleosome assembly protein 1-like 4 yes yes 0 0 0 By MS/MS 2 0 1 1 2.5078 0.34216 2 0.046099 2127 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 124.37 64.733 15085000 0 0 15085000 0 0 0 0 0 0 0 0 0 0 0 0 5993 4057 5451 51532 40659 40659 0 CALGWDHQEK Unmodified 1242.5452 0.54515585 2399 Q14247 CTTN Src substrate cortactin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 31.299 31.224 3 0.0063756 40124 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 87.485 78.586 124750000 0 0 33178000 6438300 0 6776300 7517600 5211100 6203400 0 14340000 19500000 9248300 6434300 9903700 5994 2399 5452 51533;51534;51535;51536;51537;51538;51539;51540;51541;51542;51543 40660;40661;40662;40663 40661 3 CAMLEYTTGSR Unmodified 1287.5588 0.55875701 2189 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 47.499 47.605 2 0.00063023 53815 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 78.934 73.969 43750000 0 0 0 3053100 3298000 5904800 2290800 3512500 0 5100600 5499400 0 4831300 3788800 6470800 5995 2189 5453 51544;51545;51546;51547;51548;51549;51550;51551;51552;51553;51554 40664;40665;40666;40667;40668;40669;40670;40671;40672;40673;40674 40664 11 CAMTALSSK Oxidation (M) 983.4416 0.44160198 4065 Q99832 CCT7 T-complex protein 1 subunit eta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.28 1 2 8 1 2 1 1 1 1 1 1 1 1 11.106 10.214 2 0.0021431 9077 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 90.657 62.144 197750000 859050 163860000 0 2713500 2316800 3915500 0 2222300 0 4659600 3596200 8554900 5057800 0 0 5996 4065 5454 51555;51556;51557;51558;51559;51560;51561;51562;51563;51564;51565 40675;40676;40677;40678;40679;40680;40681;40682;40683 40681 5563 9 CAMTALSSK Unmodified 967.44669 0.44668736 4065 Q99832 CCT7 T-complex protein 1 subunit eta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 27.657 26.729 2 0.0035031 28540 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 103.56 83.008 615090000 56469000 430880000 0 0 7010800 11498000 7044200 0 5292600 12396000 18722000 21248000 11339000 12694000 20493000 5997 4065 5454 51566;51567;51568;51569;51570;51571;51572;51573;51574;51575;51576;51577;51578;51579 40684;40685;40686;40687;40688;40689;40690;40691;40692;40693;40694;40695;40696;40697;40698;40699 40694 15 CAPGVVGPAEADIDFDIIRNDNDTFTVK Unmodified 3048.4499 0.44986507 1124 P21333 FLNA Filamin-A yes yes 0 0 1 By MS/MS 2 0 1 1 94.811 86.68 3 3.1248E-07 112154 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.526 46.317 10919000 10919000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5998 1124 5455 51580 40700 40700 1 CAPSAGSPAAAVGR Unmodified 1270.6088 0.60881874 3047 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 29.546 29.64 2 0.00039745 32555 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 72.006 63.473 57946000 0 0 0 8677100 8782800 0 0 0 0 13008000 0 0 14254000 0 13224000 5999 3047 5456 51581;51582;51583;51584;51585 40701;40702;40703;40704;40705 40704 5 CASQSGMTAYGTR Unmodified 1388.5813 0.58128336 4008 Q99439 CNN2 Calponin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 24.241 24.542 2 2.048E-08 25757 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 106.29 17.61 31350000 0 0 0 3339400 0 3995800 0 0 0 2849500 4587100 5032300 0 0 11545000 6000 4008 5457 51586;51587;51588;51589;51590;51591;51592;51593;51594;51595 40706;40707;40708;40709;40710;40711;40712;40713;40714;40715 40712 10 CASQSGMTAYGTRR Unmodified 1544.6824 0.68239439 4008 Q99439 CNN2 Calponin-2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 19.565 19.804 3 0.0034833 20213 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 40.025 7.7494 61932000 0 0 0 0 4360700 3969900 4733500 4800000 4250200 0 11686000 8507900 6098200 4982500 8543000 6001 4008 5458 51596;51597;51598;51599;51600;51601;51602;51603;51604;51605 40716;40717;40718;40719 40718 4 CASQVGMTAPGTR Oxidation (M) 1350.602 0.6020188 4008 Q99439 CNN2 Calponin-2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 16.523 16.677 2 0.0024618 16374 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 52.278 31.949 8418500 0 0 0 943310 0 0 1368200 0 0 1351000 0 2805400 1950600 0 0 6002 4008 5459 51606;51607;51608;51609;51610;51611 40720;40721;40722 40721 5490 3 CASQVGMTAPGTRR Unmodified 1490.7082 0.70821521 4008 Q99439 CNN2 Calponin-2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 23.704 23.944 3 0.00020527 25466 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 49.298 39.377 109750000 0 0 0 0 7054600 6977100 9610700 8734500 6100000 8305700 9496300 11160000 9856400 9039700 23419000 6003 4008 5460 51612;51613;51614;51615;51616;51617;51618;51619;51620;51621;51622 40723;40724;40725;40726 40724 4 CATITPDEARVEEFK Unmodified 1764.8352 0.83524944 1553 P48735 IDH2 Isocitrate dehydrogenase [NADP], mitochondrial yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 63.319 57.982 3 0.026919 74582 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 34.277 16.139 28265000 0 28265000 0 0 0 0 0 0 0 0 0 0 0 0 0 6004 1553 5461 51623;51624 40727 40727 1 CATITPDEK Unmodified 1033.475 0.4750106 552 O75874 IDH1 Isocitrate dehydrogenase [NADP] cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 19.286 18.463 2 0.0034132 17780 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 105.57 78.966 114210000 12555000 42670000 0 5842100 0 0 0 2857100 0 0 9141500 8766200 0 6235700 26147000 6005 552 5462 51625;51626;51627;51628;51629;51630;51631;51632 40728;40729;40730;40731;40732;40733;40734 40731 7 CAVEERKACVR Unmodified 1376.6653 0.66528776 2388 Q14191 WRN Werner syndrome ATP-dependent helicase yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 17.543 17.7 3 0.044417 16623 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.79 22.458 48157000 0 0 0 6053800 0 4368800 0 7851100 3658600 9302600 0 0 8775500 0 8146400 6006 2388 5463 51633;51634;51635;51636;51637;51638;51639 40735 40735 0 CAYQILVQVK Unmodified 1220.6587 0.65872905 1709 P53041 PPP5C Serine/threonine-protein phosphatase 5 yes yes 0 0 0 By MS/MS 2 0 1 1 79.178 71.047 2 3.5622E-06 93171 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 147.52 136.81 44525000 44525000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6007 1709 5464 51640 40736 40736 1 CAYRASYSDGK Unmodified 1276.5506 0.55063516 1418 P40692 MLH1 DNA mismatch repair protein Mlh1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 17.151 13.79 3 0.016247 20015 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.727 41.606 39729000 36019000 0 3710100 0 0 0 0 0 0 0 0 0 0 0 0 6008 1418 5465 51641;51642 40737 40737 1 CCNHPYLFPVAAMEAPK Unmodified 2003.9056 0.90559439 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 0 0 By MS/MS 2 0 1 1 88.51 80.38 3 0.0029976 104582 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.235 47.525 4248700 4248700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6009 2451 5466 51643 40738 40738 1 CCQAVRQTVEDEK Unmodified 1621.7188 0.71883948 5402 yes yes 0 0 1 By MS/MS 2 0 1 1 10.794 7.5296 3 0.040071 10396 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 34.386 5.373 + 29031000 0 29031000 0 0 0 0 0 0 0 0 0 0 0 0 0 6010 5402 5467 51644 40739 40739 1 CCSGAIIVLTK Unmodified 1220.6257 0.62571436 1000 P14618 PKM Pyruvate kinase PKM yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.44 3.62 2 1 6 1 1 1 1 1 1 1 1 1 64.577 62.84 2 0.0050759 77910 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 88.681 65.609 449160000 347540000 35583000 33146000 8092400 0 0 0 0 2294200 0 4627000 7701100 0 2703400 7476900 6011 1000 5468 51645;51646;51647;51648;51649;51650;51651;51652;51653 40740;40741;40742;40743 40743 4 CDAVSVLEK Unmodified 1019.4957 0.49574604 306 O43237 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 yes yes 0 0 0 By MS/MS By MS/MS 5 3.56 1 1 1 2 1 48.285 43.023 2 0.015707 55742 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.787 64.248 121960000 0 121960000 0 0 0 0 0 0 0 0 0 0 0 0 0 6012 306 5469 51654;51655;51656 40744;40745 40745 2 CDDLEALK Unmodified 962.4379 0.43789681 813 P05556 ITGB1 Integrin beta-1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 39.601 39.428 2 0.045385 44105 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 48.561 34.89 5018000 0 0 0 0 1717100 0 0 0 3300900 0 0 0 0 0 0 6013 813 5470 51657;51658 40746;40747 40747 2 CDEILMEEIK Unmodified 1278.5836 0.58357477 2816 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 0 0 0 By MS/MS 2 0 1 1 76.898 72.061 2 0.00091496 89980 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.62 98.846 33351000 0 33351000 0 0 0 0 0 0 0 0 0 0 0 0 0 6014 2816 5471 51659 40748 40748 1 CDENILWLDYK Unmodified 1467.6704 0.67041595 1000 P14618 PKM Pyruvate kinase PKM yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 84.711 83.523 2 2.8874E-09 103667 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 157.95 149.9 512230000 63013000 251690000 0 4816300 5634700 11835000 8312800 15134000 13812000 17536000 25409000 23669000 2926700 11004000 57435000 6015 1000 5472 51660;51661;51662;51663;51664;51665;51666;51667;51668;51669;51670;51671;51672;51673;51674;51675 40749;40750;40751;40752;40753;40754;40755;40756;40757;40758;40759;40760;40761;40762;40763;40764;40765;40766;40767;40768;40769;40770;40771;40772 40752 24 CDEPILSNR Unmodified 1102.5077 0.50770771 1269 P30086 PEBP1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.17 3.85 2 1 3 1 2 1 1 1 37.382 33.411 2 8.3873E-07 43468 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 162.25 88.278 153270000 6444100 124150000 0 0 0 0 0 0 0 0 0 0 0 22679000 0 6016 1269 5473 51676;51677;51678;51679;51680;51681 40773;40774;40775;40776;40777;40778 40773 5 CDEPILSNRSGDHRGK Unmodified 1839.8646 0.86459251 1269 P30086 PEBP1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide yes yes 0 0 2 By MS/MS 2 0 2 2 23.623 18.647 3;4 0.00064678 26590 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.319 38.727 35400000 35400000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6017 1269 5474 51682;51683 40779;40780 40779 2 CDFPIMK Unmodified 909.40885 0.40884529 2106 Q04760 GLO1 Lactoylglutathione lyase yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 65.053 57.952 2 0.03062 74136 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.467 68.28 112540000 6335500 106200000 0 0 0 0 0 0 0 0 0 0 0 0 0 6018 2106 5475 51684;51685 40781 40781 1 CDFTEDQTAEFK Acetyl (Protein N-term) 1531.6137 0.61368893 1813 P60660 MYL6 Myosin light polypeptide 6 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.93 1 6 12 3 2 2 1 1 1 1 1 1 1 1 1 1 1 1 69.887 69.286 2;3 5.9916E-44 78067 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 182.71 181.46 1979300000 65890000 29701000 2095200 91602000 168780000 141180000 154940000 158300000 98579000 150170000 197070000 221960000 143510000 135560000 219950000 6019 1813 5476 51686;51687;51688;51689;51690;51691;51692;51693;51694;51695;51696;51697;51698;51699;51700;51701;51702;51703;51704 40782;40783;40784;40785;40786;40787;40788;40789;40790;40791;40792;40793;40794;40795;40796;40797;40798;40799;40800;40801;40802;40803;40804 40804 22 CDFTGTLIVVPDVSK Unmodified 1649.8335 0.83345853 2415 Q14566 MCM6 DNA replication licensing factor MCM6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 86.488 85.706 2 1.6167E-22 106035 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.99 103.76 72649000 9002800 10043000 0 0 2406500 4011100 2600300 3498700 3814400 5449800 7074000 8091300 2809800 3827500 10019000 6020 2415 5477 51705;51706;51707;51708;51709;51710;51711;51712;51713;51714;51715;51716;51717;51718 40805;40806;40807;40808;40809;40810;40811;40812;40813;40814;40815;40816;40817;40818 40808 14 CDIEEATNQLLDVNLHENQK Acetyl (Protein N-term) 2424.1227 0.12271727 4176 Q9BV44 THUMPD3 THUMP domain-containing protein 3 yes yes 1 0 0 By MS/MS 2 0 1 1 94.154 89.258 2 8.994E-09 110712 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.67 66.349 34148000 0 34148000 0 0 0 0 0 0 0 0 0 0 0 0 0 6021 4176 5478 51719 40819;40820 40819 2 CDILVQEELLASPK Unmodified 1613.8335 0.83345853 3897 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 86.214 81.44 2 6.4812E-31 101227 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 149.49 130.96 25642000 0 25642000 0 0 0 0 0 0 0 0 0 0 0 0 0 6022 3897 5479 51720 40821 40821 1 CDLEDERVVGK Unmodified 1318.6187 0.61871473 1840;1914 P61224;A6NIZ1;P62834 RAP1B;RAP1A Ras-related protein Rap-1b;Ras-related protein Rap-1b-like protein;Ras-related protein Rap-1A no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 20 2 1 2 2 2 1 2 2 2 2 2 32.019 32.192 2;3 0.00038828 35527 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 67.385 51.007 269900000 0 0 0 21849000 12001000 16693000 19510000 18480000 16455000 25425000 56367000 0 27437000 18560000 37124000 6023 1840;1914 5480 51721;51722;51723;51724;51725;51726;51727;51728;51729;51730;51731;51732;51733;51734;51735;51736;51737;51738;51739;51740 40822;40823;40824;40825;40826;40827;40828;40829;40830;40831;40832;40833;40834;40835 40835 12 CDLISIPK Unmodified 944.5001 0.50010314 5008 Q9ULV4 CORO1C Coronin-1C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 65.843 65.08 2 0.016501 73785 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.169 40.049 229790000 0 185990000 3442900 0 0 5217200 2160900 0 0 2853000 5436000 6844700 3738400 4146100 9962500 6024 5008 5481 51741;51742;51743;51744;51745;51746;51747;51748;51749;51750 40836;40837;40838;40839;40840 40838 5 CDNIFITGPTGSVK Unmodified 1507.7341 0.73407884 4393;5174 Q9H4A3;Q9Y3S1 WNK1;WNK2 Serine/threonine-protein kinase WNK1;Serine/threonine-protein kinase WNK2 no no 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 71.163 70.61 2 3.0607E-08 80511 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.604 86.081 275000000 0 134860000 0 5636200 6443400 8336300 4923100 9911700 7887600 12692000 12495000 19007000 15204000 13375000 24225000 6025 4393;5174 5482 51751;51752;51753;51754;51755;51756;51757;51758;51759;51760;51761;51762;51763;51764 40841;40842;40843;40844;40845;40846;40847;40848;40849;40850;40851 40844 8 CDNSSMSLQMGYTQGANQSGQVFGLGR 2 Oxidation (M) 2924.2487 0.2487392 4008 Q99439 CNN2 Calponin-2 yes yes 0 2 0 By MS/MS 10 0 1 1 73.022 73.173 3 5.7255E-08 84128 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 40.756 39.772 6764900 0 0 0 0 0 0 6764900 0 0 0 0 0 0 0 0 6026 4008 5483 51765 40852 40852 5491;5492 1 CDPAGYYCGFK Unmodified 1336.5216 0.52164322 1819 P60900 PSMA6 Proteasome subunit alpha type-6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 58.172 53.328 2 0.022395 65996 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 57.59 46.425 376270000 0 372240000 4033400 0 0 0 0 0 0 0 0 0 0 0 0 6027 1819 5484 51766;51767;51768;51769 40853;40854;40855 40854 3 CDPDAARAIVDALPPPCESACTVPTDVDK Unmodified 3139.426 0.42603486 2505 Q15181 PPA1 Inorganic pyrophosphatase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.43 0.495 4 3 1 5 1 86.312 82.031 3;4 2.4653E-12 100075 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.949 67.23 620720000 11865000 582620000 26233000 0 0 0 0 0 0 0 0 0 0 0 0 6028 2505 5485 51770;51771;51772;51773;51774;51775;51776 40856;40857;40858;40859;40860;40861;40862;40863 40856 8 CDQQQIQCR Acetyl (Protein N-term) 1276.5289 0.52885386 2781 Q5T749 KPRP Keratinocyte proline-rich protein yes yes 1 0 0 By MS/MS 10 0 1 1 23.555 23.384 2 0.0020421 24727 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 75.38 63.889 5246900 0 0 0 5246900 0 0 0 0 0 0 0 0 0 0 0 6029 2781 5486 51777 40864 40864 1 CDRNLAMGVNLTSMSK Unmodified 1795.8379 0.83790875 959 P12004 PCNA Proliferating cell nuclear antigen yes yes 0 0 1 By MS/MS 10 0 1 1 66.566 67.103 3 0.0049266 76327 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 25.917 21.035 5824100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5824100 6030 959 5487 51778 40865 40865 1 CDSAFDIK Unmodified 954.41168 0.41168206 3373 Q8N999 C12orf29 Uncharacterized protein C12orf29 yes yes 0 0 0 By MS/MS 2 0 1 1 43.843 38.624 2 0.014965 50192 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.806 70.834 39458000 0 39458000 0 0 0 0 0 0 0 0 0 0 0 0 0 6031 3373 5488 51779 40866 40866 1 CDSSPDSAEDVRK Unmodified 1464.6151 0.61508591 71 CON__P12763;P02765 AHSG Alpha-2-HS-glycoprotein;Alpha-2-HS-glycoprotein chain A;Alpha-2-HS-glycoprotein chain B yes no 0 0 1 By MS/MS 3 0 1 1 14.046 10.579 3 0.041181 13232 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 30.998 29.165 + 14973000 0 14973000 0 0 0 0 0 0 0 0 0 0 0 0 0 6032 71 5489 51780 40867 40867 1 CDTEFPNFK Unmodified 1156.4859 0.48590964 1221 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 63.056 57.719 2 0.0005968 74103 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 148.04 138.57 82481000 0 82481000 0 0 0 0 0 0 0 0 0 0 0 0 0 6033 1221 5490 51781;51782 40868 40868 1 CDTYQLIMEVR Oxidation (M) 1442.6534 0.65338567 2160 Q08554 DSC1 Desmocollin-1 yes yes 0 1 0 By MS/MS 10 0 1 1 74.018 73.471 2 0.00025018 85298 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 87.298 69.434 15994000 0 0 0 15994000 0 0 0 0 0 0 0 0 0 0 0 6034 2160 5491 51783 40869 40869 3474 1 CDVDETVSSATLSEETEKPK Unmodified 2224.0053 0.0052874765 238 O14981 BTAF1 TATA-binding protein-associated factor 172 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 56.773 51.429 3 7.3795E-38 66140 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.23 117.78 30737000 0 30737000 0 0 0 0 0 0 0 0 0 0 0 0 0 6035 238 5492 51784;51785 40870 40870 1 CDVDIRK Unmodified 904.44365 0.44365089 1951;1815;2711 P60709;P63261;Q562R1 ACTB;ACTG1;ACTBL2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Beta-actin-like protein 2 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13.635 13.102 2 0.017226 15983 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 161.89 119.77 8763200000 868170000 2403600000 549150000 263590000 343430000 388300000 349460000 210780000 274160000 490530000 573500000 548150000 522900000 452570000 524920000 6036 1815;1951;2711 5493 51786;51787;51788;51789;51790;51791;51792;51793;51794;51795;51796;51797;51798;51799;51800 40871;40872;40873;40874;40875 40871 2 CDYENVPTTVFTPLEYGACGLSEEK Unmodified 2878.2677 0.26772653 2641 Q16881 TXNRD1 Thioredoxin reductase 1, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.22 2.44 5 3 1 1 6 1 1 94.729 90.867 2;3 2.5332E-78 111940 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 137.04 131.51 926260000 7523400 912140000 3074700 0 0 0 0 0 0 0 0 0 0 0 3517700 6037 2641 5494 51801;51802;51803;51804;51805;51806;51807;51808;51809 40876;40877;40878;40879;40880;40881;40882;40883;40884;40885;40886 40876 10 CDYMDEVTYGELEK Oxidation (M) 1766.7015 0.70151766 2645 Q1KMD3 HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 2 2 1 1 2 2 1 2 2 2 1 60.974 61.074 2 2.1377E-13 69737 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 110.66 106.99 94812000 0 0 0 2511000 10845000 9268700 4121500 3995500 6460100 11215000 5183200 16875000 9589000 10047000 4701100 6038 2645 5495 51810;51811;51812;51813;51814;51815;51816;51817;51818;51819;51820;51821;51822;51823;51824;51825;51826;51827;51828 40887;40888;40889;40890;40891;40892;40893;40894;40895;40896;40897;40898;40899;40900 40900 4300 11 CDYMDEVTYGELEK Unmodified 1750.7066 0.70660304 2645 Q1KMD3 HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 75.218 74.909 2 2.5391E-29 91470 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 173.04 165.31 128700000 0 52477000 0 2473000 0 5999800 2792400 5395500 5790400 9673700 6199300 11370000 6034000 5674000 14817000 6039 2645 5495 51829;51830;51831;51832;51833;51834;51835;51836;51837;51838;51839;51840;51841 40901;40902;40903;40904;40905;40906;40907;40908;40909;40910;40911;40912;40913 40904 13 CEDLETQTQSEK Unmodified 1466.6195 0.61950259 171 O00592 PODXL Podocalyxin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.221 19.417 2 0.00035817 18675 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.297 83.773 31454000 0 0 0 2071600 2260200 2099200 1963100 2507800 1820600 2599800 2351400 4424500 3126000 3094700 3135100 6040 171 5496 51842;51843;51844;51845;51846;51847;51848;51849;51850;51851;51852;51853 40914;40915;40916;40917;40918;40919;40920;40921;40922;40923;40924;40925 40917 12 CEEEAAVQPHSR Unmodified 1411.615 0.61502633 5054 Q9UPQ0 LIMCH1 LIM and calponin homology domains-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 1 1 2 13.429 13.609 2;3 0.00090585 12804 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 67.997 62.681 128440000 0 0 0 7648600 8602700 10190000 7729100 7039600 6817400 12097000 13567000 13301000 12043000 9489300 19916000 6041 5054 5497 51854;51855;51856;51857;51858;51859;51860;51861;51862;51863;51864;51865;51866 40926;40927;40928;40929;40930;40931;40932;40933;40934 40928 7 CEEEIAK Unmodified 877.38513 0.38513296 1328 P33176 KIF5B Kinesin-1 heavy chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 9.8021 9.6216 2 0.021005 8445 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 107.43 90.503 45927000 9086900 0 0 2606000 2532600 3561600 3695600 3593600 2724100 2030900 4291100 2955000 3415500 1779100 3654700 6042 1328 5498 51867;51868;51869;51870;51871;51872;51873;51874;51875;51876;51877;51878;51879 40935;40936;40937;40938;40939 40935 5 CEESFVK Unmodified 897.39022 0.39021834 859 P08174 CD55 Complement decay-accelerating factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.076 23.281 2 0.028147 24912 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 76.847 62.434 73869000 0 0 0 5799800 4540500 4303900 3932400 4396800 4054800 4372300 7438300 11463000 9719400 8770300 5077200 6043 859 5499 51880;51881;51882;51883;51884;51885;51886;51887;51888;51889;51890;51891 40940 40940 1 CEFAVGYQR Unmodified 1128.5022 0.50222841 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 45.805 46.251 2 0.0094557 51007 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.682 58.742 6215100 0 0 0 0 0 0 0 0 2288200 0 0 0 0 0 3926900 6044 4819 5500 51892;51893 40941 40941 1 CEFAVGYQRLK Unmodified 1369.6813 0.6812554 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS 2 0 1 1 62.98 54.712 2 0.022262 73963 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.279 61.377 5330900 5330900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6045 4819 5501 51894 40942 40942 1 CEFFNAGGSVK Unmodified 1214.539 0.53900784 910 P0DN79;P35520 CBS Cystathionine beta-synthase yes no 0 0 0 By MS/MS 2.5 0.5 1 1 2 58.02 52.678 2 0.016269 67716 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 61.765 50.402 57465000 0 57465000 0 0 0 0 0 0 0 0 0 0 0 0 0 6046 910 5502 51895;51896 40943 40943 1 CEFQDAYVLLSEK Unmodified 1600.7443 0.74430917 930 P10809 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.89 2.72 3 1 24 1 2 1 2 2 2 2 2 2 2 2 2 2 2 2 83.687 83.355 2;3 1.6271E-41 96162 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 173.6 168.9 651020000 0 72886000 5383600 12485000 25948000 49945000 25094000 35797000 48827000 78471000 53559000 61312000 36510000 42696000 102110000 6047 930 5503 51897;51898;51899;51900;51901;51902;51903;51904;51905;51906;51907;51908;51909;51910;51911;51912;51913;51914;51915;51916;51917;51918;51919;51920;51921;51922;51923;51924 40944;40945;40946;40947;40948;40949;40950;40951;40952;40953;40954;40955;40956;40957;40958;40959;40960;40961;40962;40963;40964;40965;40966 40950 17 CEGKEEEEETDGSGK Unmodified 1682.6577 0.65773859 4814 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.36 2.01 1 10 1 1 1 1 1 1 1 1 1 1 1 6.0776 5.8972 3 4.5148E-15 4139 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 103.79 102.97 39301000 0 1588200 0 0 2750300 2230100 3422600 0 2920500 3997000 4121700 5390100 4514000 3925400 4441400 6048 4814 5504 51925;51926;51927;51928;51929;51930;51931;51932;51933;51934;51935 40967;40968;40969;40970;40971;40972;40973;40974;40975;40976;40977;40978;40979 40978 12 CEGRSAGSIPGERSTDTTK Unmodified 2007.928 0.92798063 2099 Q04206 RELA Transcription factor p65 yes yes 0 0 2 By MS/MS By MS/MS 2 0 4 2 2 21.582 17.776 3;4 0.0057305 22664 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 50.387 32.47 32275000 16328000 0 15947000 0 0 0 0 0 0 0 0 0 0 0 0 6049 2099 5505 51936;51937;51938;51939 40980;40981;40982;40983 40981 3 CEHLLASAK Unmodified 1027.5121 0.51206481 2768 Q5T1M5 FKBP15 FK506-binding protein 15 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 23.919 19.948 2 0.024101 28459 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 122.28 79.035 40880000 30514000 0 10366000 0 0 0 0 0 0 0 0 0 0 0 0 6050 2768 5506 51940;51941 40984;40985;40986 40984 2 CEIARFYK Unmodified 1085.5328 0.53280025 4104;2963 Q9BR76;Q6QEF8 CORO1B;CORO6 Coronin-1B;Coronin-6 no no 0 0 1 By MS/MS 2 0 1 1 49.589 41.764 2 0.014702 57871 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 125.81 95.629 10153000 10153000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6051 4104;2963 5507 51942 40987 40987 1 CEIDPMFQK Oxidation (M) 1182.5049 0.50493052 2467 Q15003 NCAPH Condensin complex subunit 2 yes yes 0 1 0 By MS/MS 2 0 1 1 48.056 42.493 2 0.0066386 55256 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.904 88.194 58678000 0 58678000 0 0 0 0 0 0 0 0 0 0 0 0 0 6052 2467 5508 51943 40988 40988 4064 1 CELENCQPFVVETLHGK Unmodified 2058.9503 0.95029598 2124 Q06203 PPAT Amidophosphoribosyltransferase yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 77.041 73.961 3 0.0080516 88769 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 37.083 27.553 12464000 0 3160500 9303900 0 0 0 0 0 0 0 0 0 0 0 0 6053 2124 5509 51944;51945 40989;40990 40989 2 CELLYEGPPDDEAAMGIK Oxidation (M) 2022.8914 0.89144369 980 P13639 EEF2 Elongation factor 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 72.942 73.204 2 9.5902E-06 83737 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.705 49.479 36646000 0 0 0 0 0 0 0 0 0 0 6300600 10674000 0 6076000 13596000 6054 980 5510 51946;51947;51948;51949 40991;40992;40993;40994 40991 1305 4 CELLYEGPPDDEAAMGIK Unmodified 2006.8965 0.89652907 980 P13639 EEF2 Elongation factor 2 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 79.065 79.287 2 2.9304E-38 91273 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 133.71 118.84 15159000 0 0 0 0 0 0 0 0 0 0 4154800 0 0 0 11004000 6055 980 5510 51950;51951 40995 40995 1 CELSSSVQTDINLPYLTMDSSGPK Oxidation (M) 2657.22 0.22004805 1399 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 1 0 By MS/MS 2 0 1 1 89.443 84.57 3 6.7997E-05 105193 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 57.432 53.769 37488000 0 37488000 0 0 0 0 0 0 0 0 0 0 0 0 0 6056 1399 5511 51952 40996 40996 2169 1 CELSSSVQTDINLPYLTMDSSGPK Unmodified 2641.2251 0.22513343 1399 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 93.307 88.397 3 7.0058E-15 109838 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.377 58.02 49010000 0 49010000 0 0 0 0 0 0 0 0 0 0 0 0 0 6057 1399 5511 51953 40997;40998;40999 40998 3 CEMEQQNQEYK Oxidation (M) 1501.5813 0.58134294 56;84;97 CON__P02533;P02533;CON__Q04695;Q04695;CON__Q61782 KRT14;KRT17 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 17 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 8.5838 8.712 2 6.2204E-127 6077 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 218.55 214.1 + 108160000 0 0 0 38752000 9927200 4567800 3774700 2847900 3291000 8752000 13254000 6213800 10999000 3603900 2172200 6058 56;84;97 5512 51954;51955;51956;51957;51958;51959;51960;51961;51962;51963;51964;51965 41000;41001;41002;41003;41004;41005;41006;41007 41003 55 8 CEMEQQNQEYK Unmodified 1485.5864 0.58642832 56;84;97 CON__P02533;P02533;CON__Q04695;Q04695;CON__Q61782 KRT14;KRT17 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 17 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 17.33 17.516 2 0 17703 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 265.17 262.03 + 472880000 0 0 0 202060000 20604000 24591000 12690000 17345000 8252200 51886000 21957000 20659000 60321000 17740000 14768000 6059 56;84;97 5512 51966;51967;51968;51969;51970;51971;51972;51973;51974;51975;51976;51977 41008;41009;41010;41011;41012;41013;41014;41015;41016;41017;41018;41019;41020;41021 41010 14 CEMPELVQHK Unmodified 1269.5846 0.58457783 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.623 41.8 3 0.020788 46634 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 42.336 32.681 80918000 0 0 0 5357800 4005200 7023200 4537400 6858200 4858200 8409700 8612100 7308800 7502500 8115500 8329700 6060 2361 5513 51978;51979;51980;51981;51982;51983;51984;51985;51986;51987;51988;51989 41022;41023;41024;41025 41022 4 CEMSEHPSQTVR Unmodified 1459.6184 0.61839715 2661 Q32MZ4 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 16.512 16.708 3 0.01206 16189 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 41.242 36.901 21660000 0 0 0 648190 1070800 1416500 0 1187800 0 1617800 3074900 5038700 0 2775900 4829800 6061 2661 5514 51990;51991;51992;51993;51994;51995;51996;51997;51998 41026;41027 41027 2 CEPIIMTVPRK Unmodified 1342.7101 0.71011269 5008;2963 Q9ULV4;Q6QEF8 CORO1C;CORO6 Coronin-1C;Coronin-6 no no 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 65.545 58.761 2;3 0.0016935 79015 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.344 47.943 338430000 330860000 0 7563000 0 0 0 0 0 0 0 0 0 0 0 0 6062 5008;2963 5515 51999;52000;52001 41028;41029 41029 2 CEPIIMTVPRK Oxidation (M) 1358.705 0.70502731 5008;2963 Q9ULV4;Q6QEF8 CORO1C;CORO6 Coronin-1C;Coronin-6 no no 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 48.96 42.229 3 0.0051744 57963 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 59.84 47.781 80744000 68556000 12188000 0 0 0 0 0 0 0 0 0 0 0 0 0 6063 5008;2963 5515 52002;52003 41030 41030 4589 0 CEPIVMTVPRK Unmodified 1328.6945 0.69446263 4104 Q9BR76 CORO1B Coronin-1B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 57.935 51.952 3 0.0014557 70348 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.817 67.429 157550000 130850000 14489000 12203000 0 0 0 0 0 0 0 0 0 0 0 0 6064 4104 5516 52004;52005;52006 41031;41032;41033 41032 2 CEQVLIEK Unmodified 1017.5165 0.51648149 2328 Q13616 CUL1 Cullin-1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 6.71 3.81 2 1 4 1 2 1 1 1 1 35.213 33.891 2 0.002488 43485 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.16 58.588 184150000 0 163640000 0 0 0 0 3997600 0 0 4785900 0 3768500 0 0 7951800 6065 2328 5517 52007;52008;52009;52010;52011;52012;52013 41034;41035;41036;41037;41038 41035 5 CESAFLSK Unmodified 940.43242 0.43241751 2006 P83731 RPL24 60S ribosomal protein L24 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 32.366 31.854 2 0.010494 34983 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 79.474 49.901 483270000 0 165110000 0 16770000 25521000 22538000 27292000 10323000 27773000 24394000 32565000 48111000 27681000 24648000 30549000 6066 2006 5518 52014;52015;52016;52017;52018;52019;52020;52021;52022;52023;52024;52025;52026;52027 41039;41040;41041;41042;41043;41044;41045 41040 6 CESAPGCGVWQRPVIDNPNYK Unmodified 2446.1158 0.11579817 1227 P27824 CANX Calnexin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.863 66.945 3 5.8765E-21 76207 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.057 90.77 140600000 0 0 0 6506300 7537400 16714000 7146000 18362000 12579000 9035100 13879000 15819000 2166700 13974000 16877000 6067 1227 5519 52028;52029;52030;52031;52032;52033;52034;52035;52036;52037;52038;52039 41046;41047;41048;41049;41050;41051;41052;41053;41054;41055;41056;41057;41058;41059 41050 14 CEVTEVSK Unmodified 950.4379 0.43789681 661 O95433 AHSA1 Activator of 90 kDa heat shock protein ATPase homolog 1 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14.778 14.375 2 0.0040476 14231 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 132.08 90.782 369050000 28087000 53110000 0 11951000 13178000 36254000 16653000 12118000 11805000 36361000 35073000 19613000 19920000 29946000 44980000 6068 661 5520 52040;52041;52042;52043;52044;52045;52046;52047;52048;52049;52050;52051;52052;52053 41060;41061;41062;41063;41064 41060 2 CEYSAHK Unmodified 893.37015 0.3701516 4297 Q9GZN8 C20orf27 UPF0687 protein C20orf27 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 5.6189 2.3181 2 0.031384 4301 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.55 57.433 50099000 0 50099000 0 0 0 0 0 0 0 0 0 0 0 0 0 6069 4297 5521 52054;52055 41065 41065 1 CFAETPNK Unmodified 965.42767 0.42766648 2481 Q15029 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20.418 19.947 2 0.0057923 20351 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 117.93 104.95 161230000 5045900 84559000 0 2912900 3569100 6702900 2949000 3002000 4969200 6861600 8883100 8909600 6492900 6846100 9523200 6070 2481 5522 52056;52057;52058;52059;52060;52061;52062;52063;52064;52065;52066;52067;52068;52069 41066;41067;41068;41069;41070;41071;41072;41073;41074;41075;41076;41077;41078 41074 12 CFAETPNKK Unmodified 1093.5226 0.5226295 2481 Q15029 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 15.74 12.449 2 0.026557 18285 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.492 85.423 38317000 21271000 8444600 8601900 0 0 0 0 0 0 0 0 0 0 0 0 6071 2481 5523 52070;52071;52072 41079;41080 41079 2 CFGEQNK Unmodified 881.37015 0.3701516 2244 Q13155 AIMP2 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 9.7513 6.2366 2 0.0088516 8939 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 146.21 128.45 241240000 2393300 238850000 0 0 0 0 0 0 0 0 0 0 0 0 0 6072 2244 5524 52073;52074 41081;41082 41082 2 CFGGLQK Unmodified 808.39016 0.39015876 929 P10768 ESD S-formylglutathione hydrolase yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 30.159 25.723 2 0.014419 35874 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 137.2 87.891 262930000 249830000 0 13108000 0 0 0 0 0 0 0 0 0 0 0 0 6073 929 5525 52075;52076 41083;41084;41085 41084 3 CFGTGAAGNR Unmodified 1009.44 0.4399625 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 16.027 16.238 2 0.0019883 14683 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 87.181 70.254 170260000 0 0 0 7237800 0 9222100 10688000 6170900 6488300 10306000 16186000 36342000 16053000 25492000 26073000 6074 1986 5526 52077;52078;52079;52080;52081;52082;52083;52084;52085;52086;52087 41086;41087;41088;41089;41090;41091;41092;41093;41094;41095;41096;41097 41093 12 CFGTGAAGNRTSPQEGER Unmodified 1893.8388 0.83877169 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 1 By MS/MS 2 0 1 1 29.172 23.552 3 0.0020398 33305 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.338 36.434 5861100 5861100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6075 1986 5527 52088 41098 41098 1 CFGTGAAGNRTSPQEGERYNYSK Unmodified 2549.1353 0.13534764 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 2 By MS/MS 2 0 1 1 41.454 34.773 4 3.6933E-07 47889 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.897 64.54 59752000 59752000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6076 1986 5528 52089 41099;41100 41099 2 CFIVGADNVGSK Unmodified 1265.6074 0.60742176 808 P05388;Q8NHW5 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 53.425 53.533 2 2.3682E-05 61711 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 91.658 74.263 133870000 0 0 0 0 14811000 9491900 0 13435000 0 16016000 20750000 0 25263000 34101000 0 6077 808 5529 52090;52091;52092;52093;52094;52095;52096;52097;52098 41101;41102;41103;41104;41105;41106;41107;41108;41109 41109 9 CFLVYSER Unmodified 1072.5012 0.50116577 3276 Q8IY67 RAVER1 Ribonucleoprotein PTB-binding 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 58.595 58.717 2 0.011381 66464 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 77.058 66.644 113880000 0 0 0 5001400 5588200 0 5838800 5609700 10319000 6553400 11251000 23943000 16180000 9984900 13610000 6078 3276 5530 52099;52100;52101;52102;52103;52104;52105;52106;52107;52108;52109 41110;41111;41112;41113;41114;41115;41116;41117;41118 41112 9 CFPESYTTEATR Unmodified 1460.6242 0.62419403 2348 Q13867 BLMH Bleomycin hydrolase yes yes 0 0 0 By MS/MS 10 0 1 1 50.887 50.256 2 0.013533 57181 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 52.79 34.01 7572400 0 0 0 7572400 0 0 0 0 0 0 0 0 0 0 0 6079 2348 5531 52110 41119 41119 1 CFPESYTTEATRR Unmodified 1616.7253 0.72530506 2348 Q13867 BLMH Bleomycin hydrolase yes yes 0 0 1 By MS/MS 10 0 1 1 44.584 44.043 3 0.033202 49664 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 25.647 23.508 15403000 0 0 0 15403000 0 0 0 0 0 0 0 0 0 0 0 6080 2348 5532 52111 41120 41120 1 CFPLEDTLLGK Unmodified 1291.6482 0.64822394 3107 Q7Z5K2 WAPAL Wings apart-like protein homolog yes yes 0 0 0 By MS/MS 2 0 1 1 90.891 85.995 2 0.014381 106927 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 63.216 47.574 11455000 0 11455000 0 0 0 0 0 0 0 0 0 0 0 0 0 6081 3107 5533 52112 41121;41122 41122 2 CFPSDETCEKPVDETTK Unmodified 2041.8609 0.86087185 2734 Q5JSH3 WDR44 WD repeat-containing protein 44 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 42.059 37.142 3 6.8849E-05 47834 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.141 68.712 57208000 0 57208000 0 0 0 0 0 0 0 0 0 0 0 0 0 6082 2734 5534 52113;52114 41123;41124;41125;41126;41127;41128;41129 41123 7 CFSEENHEPLR Unmodified 1416.6092 0.60921267 3961 Q96QK1 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 29.441 29.911 3 0.043665 31991 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 24.352 19.353 21576000 0 0 0 0 0 0 0 1132100 0 0 4866500 5443000 0 3460700 6673700 6083 3961 5535 52115;52116;52117;52118;52119 41130 41130 1 CFSEENHEPLRTQCALAASK Unmodified 2347.0685 0.068513631 3961 Q96QK1 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 0 0 1 By MS/MS 2 0 1 1 54.486 46.377 4 2.4522E-08 63753 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.215 70.665 35852000 35852000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6084 3961 5536 52120 41131;41132 41132 2 CFSLAATR Unmodified 924.44874 0.44873627 4746 Q9NYL9 TMOD3 Tropomodulin-3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 2 44.993 44.788 2 0.01808 50215 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 64.734 23.882 18820000 0 0 0 8138600 0 0 0 0 10681000 0 0 0 0 0 0 6085 4746 5537 52121;52122;52123;52124;52125 41133;41134;41135;41136 41133 4 CFSPGVIEVQEVQGK Unmodified 1675.824 0.82395647 260 O15160 POLR1C DNA-directed RNA polymerases I and III subunit RPAC1 yes yes 0 0 0 By MS/MS By matching By MS/MS 7.33 3.77 1 2 1 1 1 74.838 73.422 2 6.6548E-07 84192 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 99.671 90.942 51192000 0 22888000 0 0 0 0 0 0 0 0 0 0 0 12999000 15305000 6086 260 5538 52126;52127;52128 41137;41138 41138 2 CFSVLGFCK Unmodified 1116.5096 0.50962197 974 P13010 XRCC5 X-ray repair cross-complementing protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 81.15 77.638 2 0.0050201 99566 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 112.17 91.616 36968000 32338000 0 2103000 0 0 0 0 0 0 0 0 0 0 2526900 0 6087 974 5539 52129;52130;52131 41139;41140;41141 41139 3 CGAEDHVEAVK Unmodified 1213.5397 0.53973612 4144 Q9BTE6 AARSD1 Alanyl-tRNA editing protein Aarsd1 yes yes 0 0 0 By MS/MS 2 0 1 1 19.082 15.599 2 0.0072535 20368 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.098 53.943 4844800 0 4844800 0 0 0 0 0 0 0 0 0 0 0 0 0 6088 4144 5540 52132 41142;41143 41142 2 CGDLEEELK Unmodified 1091.4805 0.48048991 1957;853 P07951;P67936 TPM2;TPM4 Tropomyosin beta chain;Tropomyosin alpha-4 chain no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 42.776 42.138 2 3.4868E-06 47115 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 171.75 144.61 810240000 0 540470000 0 12115000 9839000 8554300 13345000 11002000 0 11919000 42429000 37680000 25787000 32928000 64170000 6089 853;1957 5541 52133;52134;52135;52136;52137;52138;52139;52140;52141;52142;52143;52144;52145 41144;41145;41146;41147;41148;41149;41150;41151;41152;41153;41154;41155;41156;41157 41151 11 CGDLVFAK Unmodified 908.44259 0.44258826 1674 P51858 HDGF Hepatoma-derived growth factor yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 48.026 46.358 2 0.018953 60340 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.754 71.46 636430000 0 497080000 23567000 17706000 13170000 6395100 0 0 0 0 0 0 0 0 78514000 6090 1674 5542 52146;52147;52148;52149;52150;52151 41158;41159;41160;41161;41162 41160 5 CGEAALNDPK Unmodified 1073.4812 0.48115861 2328 Q13616 CUL1 Cullin-1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 17.52 17.83 2 0.0072907 16677 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.823 48.156 14440000 0 0 0 0 0 3314900 0 0 0 2971500 0 3602500 0 0 4551300 6091 2328 5543 52152;52153;52154;52155;52156;52157 41163;41164;41165;41166 41164 4 CGEAIRSLQEAEK Unmodified 1489.7195 0.7194914 2822 Q5VW32 BROX BRO1 domain-containing protein BROX yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 1 2 42.798 38.064 2;3 0.0043798 52193 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.157 33.531 57419000 11441000 0 45978000 0 0 0 0 0 0 0 0 0 0 0 0 6092 2822 5544 52158;52159;52160 41167;41168;41169 41167 3 CGEALGLK Unmodified 846.42694 0.4269382 1977 P78347 GTF2I General transcription factor II-I yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.971 31.16 2 0.012884 33299 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.616 30.55 258230000 0 0 0 19432000 18052000 19492000 13679000 14311000 13071000 23803000 25883000 36833000 26504000 20873000 26300000 6093 1977 5545 52161;52162;52163;52164;52165;52166;52167;52168;52169;52170;52171;52172 41170;41171;41172;41173;41174;41175;41176;41177;41178;41179 41177 10 CGEDDETIPSEYR Unmodified 1569.6253 0.62531625 1113 P20810 CAST Calpastatin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.565 43.739 2 7.9014E-07 47961 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 94.465 93.775 157310000 0 0 0 9193200 6959900 7193700 9493600 10125000 7463100 13378000 20581000 17574000 15900000 10675000 28776000 6094 1113 5546 52173;52174;52175;52176;52177;52178;52179;52180;52181;52182;52183;52184 41180;41181;41182;41183;41184;41185;41186;41187;41188 41186 7 CGEDDETIPSEYRLK Unmodified 1810.8043 0.80434324 1113 P20810 CAST Calpastatin yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 59.595 53.288 3 0.00072659 68572 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.262 63.052 139210000 16384000 122820000 0 0 0 0 0 0 0 0 0 0 0 0 0 6095 1113 5547 52185;52186;52187 41189;41190;41191 41190 2 CGEELGRLK Unmodified 1060.5335 0.53352853 1544 P48556 PSMD8 26S proteasome non-ATPase regulatory subunit 8 yes yes 0 0 1 By MS/MS 2 0 1 1 29.637 26.484 2 0.044369 33520 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 101.72 60.219 9301100 0 0 9301100 0 0 0 0 0 0 0 0 0 0 0 0 6096 1544 5548 52188 41192 41192 1 CGFCHVGEEENEARGK Unmodified 1877.7785 0.77847962 3244 Q8IWS0 PHF6 PHD finger protein 6 yes yes 0 0 1 By MS/MS 2 0 1 1 30.85 25.131 3 0.0056412 35399 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.701 40.579 9477300 9477300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6097 3244 5549 52189 41193 41193 1 CGFLPGNEK Unmodified 1020.4699 0.46986564 4987 Q9UL46 PSME2 Proteasome activator complex subunit 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 43.652 42.446 2 0.0048871 46055 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.38 60.486 460190000 21592000 326780000 0 8122000 4830300 13802000 6250000 5371500 4344800 10337000 12938000 0 8952300 11975000 24895000 6098 4987 5550 52190;52191;52192;52193;52194;52195;52196;52197;52198;52199;52200;52201;52202;52203 41194;41195;41196;41197;41198;41199;41200;41201;41202;41203;41204;41205 41198 11 CGGIDEMQSSR Unmodified 1238.502 0.50197041 5074 Q9UQR1 ZNF148 Zinc finger protein 148 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 24.934 25.158 2 0.0055796 27057 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 58.699 42.817 29839000 0 0 0 0 1875800 4321200 2980500 0 2829200 4557400 3410500 4555000 0 0 5309300 6099 5074 5551 52204;52205;52206;52207;52208;52209;52210;52211 41206;41207 41207 2 CGGIVGIQTK Unmodified 1031.5434 0.54336494 400 O60443 DFNA5 Non-syndromic hearing impairment protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 44.41 38.34 2 4.6145E-06 50071 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 146.03 89.484 122700000 15094000 107610000 0 0 0 0 0 0 0 0 0 0 0 0 0 6100 400 5552 52212;52213;52214 41208;41209;41210;41211;41212 41210 5 CGHTNNLRPK Unmodified 1195.588 0.58802372 1933 P62987 UBA52 Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40 yes yes 0 0 1 By MS/MS 2 0 1 1 7.7638 4.2488 3 0.0044258 7511 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.595 55.431 86695000 86695000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6101 1933 5553 52215 41213 41213 1 CGIGQEEMEASSSQDQSK Unmodified 1969.7993 0.79933422 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.426 34.609 2 3.6814E-38 38217 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 132.47 124.56 67591000 0 0 0 3307700 2869000 6894500 3452600 3792700 2346500 6654700 12904000 6889700 4728900 4642800 9108000 6102 4285 5554 52216;52217;52218;52219;52220;52221;52222;52223;52224;52225;52226;52227 41214;41215;41216;41217;41218;41219;41220 41218 7 CGLALALNK Unmodified 958.52699 0.52698659 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 58.981 59.121 2 0.0078586 67527 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 71.296 17.328 28467000 0 0 0 0 0 8770900 0 0 0 0 0 0 7455100 12241000 0 6103 3641 5555 52228;52229;52230 41221;41222;41223 41223 3 CGLPYVEVLCK Unmodified 1336.6519 0.65192911 2124 Q06203 PPAT Amidophosphoribosyltransferase yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 85.042 81.029 2 0.0049186 100873 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.677 70.305 39849000 0 39849000 0 0 0 0 0 0 0 0 0 0 0 0 0 6104 2124 5556 52231;52232 41224 41224 1 CGLVIGRGGENVK Unmodified 1357.7136 0.71361816 3690 Q92945 KHSRP Far upstream element-binding protein 2 yes yes 0 0 1 By MS/MS 2 0 2 2 45.152 38.287 2;3 2.0997E-88 52566 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 220.17 195.95 300570000 300570000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6105 3690 5557 52233;52234 41225;41226 41226 2 CGLVLSWK Unmodified 961.50552 0.50552287 1596 P49756 RBM25 RNA-binding protein 25 yes yes 0 0 0 By matching By MS/MS By matching 10 0 3 1 1 1 74.872 75.043 2 0.030197 86577 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.676 30.678 8077700 0 0 0 0 0 0 0 0 1948800 0 0 4364500 1764400 0 0 6106 1596 5558 52235;52236;52237 41227 41227 1 CGLVPVLAENYK Unmodified 1361.7013 0.70132214 764;85 P02788;CON__Q29443;CON__Q0IIK2 LTF Lactotransferrin;Lactoferricin-H;Kaliocin-1;Lactoferroxin-A;Lactoferroxin-B;Lactoferroxin-C no no 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 82.019 78.395 2 0.033455 97461 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 59.908 49.1 + 18838000 0 17330000 1507600 0 0 0 0 0 0 0 0 0 0 0 0 6107 764;85 5559 52238;52239 41228 41228 1 CGNCGPGYSTPLEAMK Oxidation (M) 1756.7219 0.72187594 2256 Q13228 SELENBP1 Selenium-binding protein 1 yes yes 0 1 0 By MS/MS 2 0 1 1 49.418 43.712 2 0.00050212 56737 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.522 76.522 53556000 0 53556000 0 0 0 0 0 0 0 0 0 0 0 0 0 6108 2256 5560 52240 41229 41229 3676 1 CGNCGPGYSTPLEAMK Unmodified 1740.727 0.72696132 2256 Q13228 SELENBP1 Selenium-binding protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 68.353 62.454 2 7.1688E-16 79408 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.14 108.6 202100000 0 202100000 0 0 0 0 0 0 0 0 0 0 0 0 0 6109 2256 5560 52241 41230 41230 1 CGPRLSAEAAEK Unmodified 1287.6241 0.62413446 1333 P33992 MCM5 DNA replication licensing factor MCM5 yes yes 0 0 1 By MS/MS 2 0 1 1 29.027 23.407 2 0.0042552 33197 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 91.549 48.303 13254000 13254000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6110 1333 5561 52242 41231;41232 41232 2 CGQEEHDVLLSNEEDRK Unmodified 2056.912 0.91199621 4880 Q9UGI8 TES Testin yes yes 0 0 1 By MS/MS 2 0 1 1 36.239 32.855 4 0.027319 41414 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 33.872 30.21 6706300 0 0 6706300 0 0 0 0 0 0 0 0 0 0 0 0 6111 4880 5562 52243 41233 41233 1 CGQLGVGNYK Unmodified 1094.5179 0.51787847 3496 Q8TD19 NEK9 Serine/threonine-protein kinase Nek9 yes yes 0 0 0 By MS/MS 2 0 1 1 38.09 33.123 2 0.00049051 43358 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.1 104.74 15488000 0 15488000 0 0 0 0 0 0 0 0 0 0 0 0 0 6112 3496 5563 52244 41234 41234 1 CGSALVSSLATGLK Unmodified 1362.7177 0.71770049 2862 Q69YN2 CWF19L1 CWF19-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 83.121 74.99 2 0.00026887 98066 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.779 75.199 14859000 14859000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6113 2862 5564 52245;52246 41235;41236 41236 2 CGSVDFGPEVTSSDK Unmodified 1583.6774 0.67735182 4358 Q9H267 VPS33B Vacuolar protein sorting-associated protein 33B yes yes 0 0 0 By MS/MS 2 0 1 1 56.334 50.519 2 0.0021548 65288 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.395 30.863 12533000 0 12533000 0 0 0 0 0 0 0 0 0 0 0 0 0 6114 4358 5565 52247 41237 41237 1 CGTGIVGVFVK Unmodified 1135.606 0.6059652 119 O00151 PDLIM1 PDZ and LIM domain protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 82.036 76.706 2 5.1196E-09 98808 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 128.12 109.35 53372000 47022000 0 6349400 0 0 0 0 0 0 0 0 0 0 0 0 6115 119 5566 52248;52249 41238;41239;41240 41238 3 CGVEFSEPSLATK Unmodified 1423.6653 0.66533057 2958 Q6PJG2 ELMSAN1 ELM2 and SANT domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 64.435 64.244 2 0.016968 73478 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 53.683 24.596 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6116 2958 5567 52250;52251 41241;41242 41241 2 CGVISPRFDVQLK Unmodified 1517.8024 0.80243317 1878 P62244 RPS15A 40S ribosomal protein S15a yes yes 0 0 1 By MS/MS 2 0 1 1 80.544 72.413 3 0.00019924 94933 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.059 80.672 86587000 86587000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6117 1878 5568 52252 41243;41244 41244 2 CGVPFTDLLDAAK Unmodified 1405.6912 0.69115139 2053 Q01433 AMPD2 AMP deaminase 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 92.767 89.082 2 0.040036 110663 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.064 40.97 76207000 0 75213000 994210 0 0 0 0 0 0 0 0 0 0 0 0 6118 2053 5569 52253;52254 41245 41245 1 CHAEHTPEEEIDHTGAK Unmodified 1959.8381 0.83810299 686 O95757 HSPA4L Heat shock 70 kDa protein 4L yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 23.554 19.582 4 9.3886E-16 24880 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 110.38 105.77 68250000 9038600 0 59211000 0 0 0 0 0 0 0 0 0 0 0 0 6119 686 5570 52255;52256 41246 41246 0 CHAIIDEQPLIFK Unmodified 1582.8177 0.81774888 1532 P48059 LIMS1 LIM and senescent cell antigen-like-containing domain protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 81.944 76.615 3 0.00064067 98823 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.288 65.182 21104000 18694000 0 2410600 0 0 0 0 0 0 0 0 0 0 0 0 6120 1532 5571 52257;52258 41247;41248 41247 2 CHELSPREVK Unmodified 1253.6187 0.61865515 4880 Q9UGI8 TES Testin yes yes 0 0 1 By MS/MS By MS/MS 2 0 4 3 1 20.469 16.25 2;3 0.00086707 23540 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 125.97 96.225 287510000 281740000 0 5770800 0 0 0 0 0 0 0 0 0 0 0 0 6121 4880 5572 52259;52260;52261;52262 41249;41250;41251;41252;41253;41254;41255 41252 7 CHLLVEHETQK Unmodified 1392.682 0.68198369 4365;586 Q9H2G2;O94804 SLK;STK10 STE20-like serine/threonine-protein kinase;Serine/threonine-protein kinase 10 no no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching 8.4 3.2 2 8 2 1 1 1 1 1 1 1 1 21.609 20.771 2;3 5.0576E-09 32919 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 128.36 113.21 114510000 66292000 0 0 0 0 6664100 0 0 7279600 4755800 3584800 9041300 3656100 7218200 6017400 6122 4365;586 5573 52263;52264;52265;52266;52267;52268;52269;52270;52271;52272 41256;41257;41258 41257 2 CHVTIEK Unmodified 885.43784 0.43783723 5212 Q9Y4X5 ARIH1 E3 ubiquitin-protein ligase ARIH1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 15.289 12.08 2 0.014329 15102 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 127.84 81.473 36261000 24428000 0 11833000 0 0 0 0 0 0 0 0 0 0 0 0 6123 5212 5574 52273;52274 41259 41259 1 CIAPETLR Unmodified 958.4906 0.49060109 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 0 0 By matching By MS/MS By matching By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 39.433 39.596 2 0.0091721 42736 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.753 65.717 25935000 0 0 0 0 3637300 3450500 4062700 0 0 0 0 0 5353000 3361200 6069900 6124 643 5575 52275;52276;52277;52278;52279;52280 41260;41261 41261 2 CIAPIFDK Unmodified 962.48954 0.48953845 3134 Q86TC9 MYPN Myopalladin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.294 64.385 2 0.0082674 73669 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 86.794 73.805 100690000 0 0 0 6117900 6302800 8332000 5368100 7031400 8454500 6583400 9598700 13763000 9815000 9593200 9727800 6125 3134 5576 52281;52282;52283;52284;52285;52286;52287;52288;52289;52290;52291;52292 41262;41263;41264;41265;41266;41267;41268;41269;41270 41263 8 CIATVNTK Unmodified 905.46405 0.46405199 3887 Q96J01 THOC3 THO complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 22.067 17.677 2 0.03006 23386 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.37 64.128 63086000 6251100 56835000 0 0 0 0 0 0 0 0 0 0 0 0 0 6126 3887 5577 52293;52294 41271 41271 0 CIAVGESDGSIWNPDGIDPK Unmodified 2128.9735 0.97353384 721 P00367;P49448 GLUD1;GLUD2 Glutamate dehydrogenase 1, mitochondrial;Glutamate dehydrogenase 2, mitochondrial yes no 0 0 0 By MS/MS 2 0 1 1 84.49 79.746 2 6.7108E-100 99155 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 173.06 153.42 31451000 0 31451000 0 0 0 0 0 0 0 0 0 0 0 0 0 6127 721 5578 52295 41272 41272 1 CIAYAESHDQALVGDK Unmodified 1775.8148 0.81484835 2101 Q04446 GBE1 1,4-alpha-glucan-branching enzyme yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 50.468 45.63 3 0.0019102 57218 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 55.011 44.376 39452000 0 34333000 5119200 0 0 0 0 0 0 0 0 0 0 0 0 6128 2101 5579 52296;52297 41273;41274;41275 41275 2 CIDHYTK Unmodified 935.4171 0.41710179 4011 Q99460 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 6.57 3.96 3 4 1 1 1 1 1 1 1 9.7084 8.4875 2 0.026166 11075 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 135.6 83.299 114590000 26752000 32577000 42883000 0 0 0 0 0 0 2206700 5003900 3639400 1529700 0 0 6129 4011 5580 52298;52299;52300;52301;52302;52303;52304 41276;41277 41276 1 CIDSGLWVPNSK Unmodified 1374.6602 0.66018561 2612 Q16543 CDC37 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 70.254 69.945 2 2.2979E-05 79510 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 102.52 83.744 130350000 0 25652000 0 4268200 3675000 6228100 5203600 6043800 4165300 7825700 14394000 14401000 5421200 9538900 23532000 6130 2612 5581 52305;52306;52307;52308;52309;52310;52311;52312;52313;52314;52315;52316;52317 41278;41279;41280;41281;41282;41283;41284;41285;41286;41287;41288;41289 41282 12 CIEELCQK Unmodified 1078.4787 0.47871577 368 O43805 SSNA1 Sjoegren syndrome nuclear autoantigen 1 yes yes 0 0 0 By MS/MS 2 0 1 1 33.607 28.963 2 0.002447 37953 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.38 86.88 36322000 0 36322000 0 0 0 0 0 0 0 0 0 0 0 0 0 6131 368 5582 52318 41290;41291 41291 2 CIELDERLK Unmodified 1174.6016 0.6016081 5042 Q9UNS2 COPS3 COP9 signalosome complex subunit 3 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 3 6 1 1 1 1 1 1 1 1 1 48.269 46.574 3 0.00025678 58944 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 106.6 76.932 235610000 15147000 92244000 71619000 0 0 6837600 0 0 0 0 9296100 8063200 8819100 9409700 14176000 6132 5042 5583 52319;52320;52321;52322;52323;52324;52325;52326;52327 41292;41293;41294;41295;41296;41297 41295 6 CIESLIAVFQK Unmodified 1306.6955 0.69550848 1314 P31949 S100A11 Protein S100-A11;Protein S100-A11, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 89.922 89.995 2 3.3424E-15 104643 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 159.11 139.33 49273000 0 0 0 2410900 731760 2172600 948260 1634300 2789900 3448200 4572900 7886800 1676600 3506000 17495000 6133 1314 5584 52328;52329;52330;52331;52332;52333;52334;52335;52336;52337;52338;52339 41298;41299;41300;41301;41302;41303;41304;41305;41306;41307;41308;41309;41310;41311 41309 14 CIIPNHEK Unmodified 1009.5015 0.50150012 1356;1357;1366 P35579;P35580;P35749 MYH9;MYH10;MYH11 Myosin-9;Myosin-10;Myosin-11 no no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 21.471 21.673 2 0.015253 22353 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 69.176 22.512 100230000 0 0 0 0 7004700 12812000 7794400 0 6738300 8957100 16594000 13343000 11661000 15327000 0 6134 1356;1357;1366 5585 52340;52341;52342;52343;52344;52345;52346;52347;52348 41312;41313;41314;41315 41315 4 CIIVEEGK Unmodified 946.47937 0.4793677 1822 P60981 DSTN Destrin yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 33.351 32.147 2 0.012113 40854 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.28 47.818 546560000 0 499520000 9414300 5029700 0 0 0 3104700 0 0 10412000 0 0 0 19085000 6135 1822 5586 52349;52350;52351;52352;52353;52354 41316;41317 41316 2 CILAGDPAVGK Unmodified 1099.5696 0.56957969 4204 Q9BW83 IFT27 Intraflagellar transport protein 27 homolog yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 53.053 47.709 2 0.028377 59069 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 53.775 15.642 91439000 0 91439000 0 0 0 0 0 0 0 0 0 0 0 0 0 6136 4204 5587 52355;52356 41318;41319 41319 2 CILQTDVK Unmodified 975.50592 0.5059168 4327 Q9H0G5 NSRP1 Nuclear speckle splicing regulatory protein 1 yes yes 0 0 0 By matching By matching By MS/MS By matching By matching By matching 10 0 6 1 1 1 1 1 1 40.364 40.431 2 0.03731 44999 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 51.43 17.577 23570000 0 0 0 0 4989500 3996000 4545200 3063100 0 3853200 3123000 0 0 0 0 6137 4327 5588 52357;52358;52359;52360;52361;52362 41320 41320 1 CIPALDSLTPANEDQK Unmodified 1770.8458 0.84581413 930 P10809 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.041 75.1 2 7.9033E-05 87117 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 96.103 78.667 160370000 0 0 0 10423000 6992800 10718000 8758500 6170100 10649000 11615000 18304000 27813000 18770000 11509000 18649000 6138 930 5589 52363;52364;52365;52366;52367;52368;52369;52370;52371;52372;52373;52374 41321;41322;41323;41324;41325;41326;41327;41328;41329;41330;41331;41332 41331 5 CIQCGQYLDDPDLK Unmodified 1723.7546 0.75455628 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 0 0 By MS/MS 2 0 1 1 66.722 60.804 2 9.5163E-44 77689 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 167.6 160.94 54903000 0 54903000 0 0 0 0 0 0 0 0 0 0 0 0 0 6139 1201 5590 52375 41333 41333 1 CIQSILK Unmodified 860.47897 0.47897377 4023 Q99567 NUP88 Nuclear pore complex protein Nup88 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 55.437 48.461 2 0.021122 65997 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.63 43.598 69156000 34674000 34482000 0 0 0 0 0 0 0 0 0 0 0 0 0 6140 4023 5591 52376;52377 41334 41334 1 CIRPSVLGPLK Unmodified 1238.7169 0.71691263 3077 Q7Z309 FAM122B Protein FAM122B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 57.483 57.6 3 0.00017936 64390 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.666 63.979 229560000 0 0 0 12784000 11679000 15123000 12530000 8866000 0 21428000 18752000 44943000 15319000 18595000 49543000 6141 3077 5592 52378;52379;52380;52381;52382;52383;52384;52385;52386;52387;52388 41335;41336;41337;41338;41339;41340;41341;41342;41343;41344;41345;41346 41338 12 CISDAMSWLNSK Unmodified 1410.6272 0.62717092 686 O95757 HSPA4L Heat shock 70 kDa protein 4L yes yes 0 0 0 By MS/MS 2 0 1 1 85.622 77.492 2 0.017366 101158 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.03 55.149 4713300 4713300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6142 686 5593 52389 41347 41347 1 CISEVQANNVVLGQYVGNPDGEGEATK Unmodified 2847.3345 0.33450096 947 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.29 3.67 4 2 11 1 5 1 1 1 1 1 1 1 1 1 1 1 79.435 77.792 2;3 1.1612E-190 94674 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 204.7 201.65 1401500000 18002000 1200600000 0 0 9632500 15381000 7176200 8952900 9348300 13026000 24073000 26220000 9543400 18454000 41111000 6143 947 5594 52390;52391;52392;52393;52394;52395;52396;52397;52398;52399;52400;52401;52402;52403;52404;52405;52406 41348;41349;41350;41351;41352;41353;41354;41355;41356;41357;41358;41359;41360;41361;41362;41363 41351 16 CISNQIRQMEEVK Unmodified 1633.7916 0.79161049 4661 Q9NV70 EXOC1 Exocyst complex component 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 62.214 56.183 3 0.038524 75602 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.481 27.885 12524000 9844600 0 2679500 0 0 0 0 0 0 0 0 0 0 0 0 6144 4661 5595 52407;52408 41364 41364 0 CITDTLQELVNQSK Unmodified 1647.8138 0.81378572 533 O75694 NUP155 Nuclear pore complex protein Nup155 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.24 2 1 10 3 1 1 1 2 1 1 1 2 87.4 86.476 2;3 8.3569E-68 106663 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 206.36 192.54 116640000 0 67293000 0 0 1218000 2368400 0 0 2385500 11547000 4941600 7466400 0 5045600 14373000 6145 533 5596 52409;52410;52411;52412;52413;52414;52415;52416;52417;52418;52419;52420;52421 41365;41366;41367;41368;41369;41370;41371;41372;41373;41374 41367 8 CIVNNVSAETVQTVR Unmodified 1688.8516 0.85156821 3301 Q8N0X7 SPG20 Spartin yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 61.705 61.761 2 0.00010417 70797 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 94.82 72.792 38142000 0 0 0 1977600 1976100 2708300 2490400 3179100 3435700 3726800 3477000 8480100 3319200 3372100 0 6146 3301 5597 52422;52423;52424;52425;52426;52427;52428;52429;52430;52431;52432 41375;41376;41377;41378;41379;41380;41381;41382;41383;41384 41383 8 CKPVPLLELAEGQK Unmodified 1580.8596 0.8596137 3460 Q8NHV4 NEDD1 Protein NEDD1 yes yes 0 0 1 By MS/MS 2 0 1 1 84.894 76.764 3 0.0039865 100260 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.875 69.734 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6147 3460 5598 52433 41385 41385 1 CLAIHPDMVTIATGQVAGTTK Unmodified 2183.1079 0.10785925 699 O95834 EML2 Echinoderm microtubule-associated protein-like 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 83.91 78.788 3 1.0886E-23 96519 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 107.72 104.06 157300000 109340000 39354000 8602100 0 0 0 0 0 0 0 0 0 0 0 0 6148 699 5599 52434;52435;52436 41386;41387;41388 41388 3 CLAIHPDMVTIATGQVAGTTK Oxidation (M) 2199.1028 0.10277387 699 O95834 EML2 Echinoderm microtubule-associated protein-like 2 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 76.054 70.565 3 3.8586E-59 91072 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 135.18 115.62 25004000 21014000 0 3990000 0 0 0 0 0 0 0 0 0 0 0 0 6149 699 5599 52437;52438 41389;41390;41391 41389 842 3 CLATGPGIASTVK Unmodified 1273.67 0.67002202 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.57 3.85 3 1 3 1 2 1 1 1 1 53.286 49.981 2 1.1109E-09 64819 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.47 96.376 426710000 53807000 340240000 4479400 10967000 0 0 5242200 0 0 0 0 0 0 11968000 0 6150 487 5600 52439;52440;52441;52442;52443;52444;52445 41392;41393;41394;41395;41396;41397;41398;41399 41394 8 CLAYDFYPGK Unmodified 1232.5536 0.55359527 1185 P25311 AZGP1 Zinc-alpha-2-glycoprotein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.263 71.336 2 0.0048357 81787 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 71.379 64.689 153640000 0 0 0 64108000 6535600 6454400 5004600 2935400 4264400 8446300 14662000 17982000 5619500 7608700 10019000 6151 1185 5601 52446;52447;52448;52449;52450;52451;52452;52453;52454;52455;52456;52457 41400;41401;41402;41403;41404;41405;41406;41407;41408;41409;41410;41411;41412 41402 13 CLDAVVSTR Unmodified 1019.507 0.50697943 3170 Q86VP6 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 38.955 39.149 2 0.0032531 43748 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 90.657 68.571 82722000 0 0 0 4032700 3189200 14245000 0 0 3402300 9959300 10480000 8071000 5996900 7181000 16164000 6152 3170 5602 52458;52459;52460;52461;52462;52463;52464;52465;52466;52467;52468 41413;41414;41415;41416;41417;41418;41419;41420;41421;41422 41413 10 CLDEFPNLK Unmodified 1134.5379 0.53794521 1120 P21266 GSTM3 Glutathione S-transferase Mu 3 yes yes 0 0 0 By matching By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 73.292 67.92 2 0.011239 82455 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 85.212 48.816 302470000 1777300 294370000 6316900 0 0 0 0 0 0 0 0 0 0 0 0 6153 1120 5603 52469;52470;52471;52472 41423;41424;41425 41424 2 CLDENLEDASQCK Unmodified 1580.6447 0.64467148 2740 Q5JTJ3 COA6 Cytochrome c oxidase assembly factor 6 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 45.589 40.268 2 4.5689E-30 52315 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 165.11 158.51 21302000 0 21302000 0 0 0 0 0 0 0 0 0 0 0 0 0 6154 2740 5604 52473 41426 41426 1 CLEEFELLGK Unmodified 1236.606 0.60602477 4033 Q99613;B5ME19 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 0 0 0 By MS/MS 2 0 1 1 85.646 80.872 2 0.0061019 100498 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.431 79.445 20271000 0 20271000 0 0 0 0 0 0 0 0 0 0 0 0 0 6155 4033 5605 52474 41427 41427 1 CLEEQGLK Unmodified 975.46953 0.46953129 1061 P17812 CTPS1 CTP synthase 1 yes yes 0 0 0 By MS/MS 2 0 1 1 28.182 23.877 2 0.0050554 31389 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.93 74.81 371710000 0 371710000 0 0 0 0 0 0 0 0 0 0 0 0 0 6156 1061 5606 52475 41428 41428 1 CLELFSELAEDK Unmodified 1452.6806 0.68064628 862 P08238 HSP90AB1 Heat shock protein HSP 90-beta yes yes 0 0 0 By MS/MS 2 0 1 1 89.149 86.704 2 0.002939 104934 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 95.573 76.302 3692500 0 0 3692500 0 0 0 0 0 0 0 0 0 0 0 0 6157 862 5607 52476 41429 41429 1 CLELFTELAEDK Unmodified 1466.6963 0.69629635 850 P07900 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 3 1 91.99 87.308 2 1.0816E-09 109792 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 143.96 76.397 157830000 12509000 142370000 2948000 0 0 0 0 0 0 0 0 0 0 0 0 6158 850 5608 52477;52478;52479;52480;52481 41430;41431;41432;41433;41434;41435;41436;41437 41430 8 CLEMDVEK Unmodified 1022.4413 0.44126763 2248 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 no no 0 0 0 By matching By MS/MS 10 0 2 1 1 38.344 38.798 2 0.013807 42579 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 71.501 47.529 7613200 0 0 0 0 0 0 0 0 0 2320400 0 5292900 0 0 0 6159 2248 5609 52482;52483 41438 41438 1 CLENRVAVLENQNK Unmodified 1685.8519 0.85190256 1034;1080 P16220;P18846 CREB1;ATF1 Cyclic AMP-responsive element-binding protein 1;Cyclic AMP-dependent transcription factor ATF-1 no no 0 0 1 By MS/MS 2 0 1 1 56.921 48.74 3 0.00026596 66462 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.597 74.869 88888000 88888000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6160 1034;1080 5610 52484 41439 41439 1 CLFLLAPGPR Unmodified 1142.627 0.62703499 2024 P98174 FGD1 FYVE, RhoGEF and PH domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 83.849 83.742 2 0.0031139 96966 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 77.674 70.454 3620200 0 0 0 0 1582300 2037900 0 0 0 0 0 0 0 0 0 6161 2024 5611 52485;52486 41440 41440 1 CLLDRVPEEEK Unmodified 1386.6813 0.68131498 208 O14744 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 47.458 47.89 3 0.0065938 53930 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 68.536 45.618 47000000 0 0 0 0 0 0 0 0 0 0 0 0 12294000 12647000 22058000 6162 208 5612 52487;52488;52489 41441;41442;41443 41443 0 CLLLHPAGHAEPAAGSHR Unmodified 1892.9428 0.94278325 3983 Q96S55 WRNIP1 ATPase WRNIP1 yes yes 0 0 0 By MS/MS 10 0 1 1 34.582 34.582 4 0.0031574 38208 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 37.583 27.795 9768900 0 0 0 0 0 9768900 0 0 0 0 0 0 0 0 0 6163 3983 5613 52490 41444 41444 1 CLMDQATDPNILGR Oxidation (M) 1618.7443 0.74432595 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 1 2 2 2 1 2 1 2 2 2 60.01 60.101 2 3.7029E-19 67837 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 131.82 111.04 268920000 0 0 0 21682000 20952000 14053000 25709000 24189000 18021000 14059000 35733000 17919000 23019000 22907000 30681000 6164 1986 5614 52491;52492;52493;52494;52495;52496;52497;52498;52499;52500;52501;52502;52503;52504;52505;52506;52507;52508;52509;52510;52511 41445;41446;41447;41448;41449;41450;41451;41452;41453;41454;41455;41456;41457;41458;41459;41460;41461;41462;41463;41464 41450 3212 20 CLMDQATDPNILGR Unmodified 1602.7494 0.74941132 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.763 73.829 2 3.4169E-117 85113 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 208.15 184.16 319900000 0 0 0 15590000 15337000 31592000 14394000 21523000 13654000 29915000 28129000 34394000 20196000 32474000 62700000 6165 1986 5614 52512;52513;52514;52515;52516;52517;52518;52519;52520;52521;52522;52523 41465;41466;41467;41468;41469;41470;41471;41472;41473;41474;41475;41476;41477;41478 41472 14 CLMEGAGDVAFVK Unmodified 1395.6527 0.65265739 85 CON__Q29443;CON__Q0IIK2 yes no 0 0 0 By MS/MS 2 0 1 1 78.918 74.182 2 0.0030261 92496 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.841 48.327 + 21170000 0 21170000 0 0 0 0 0 0 0 0 0 0 0 0 0 6166 85 5615 52524 41479 41479 1 CLPIESNPHSFDSPHTK Unmodified 1964.9051 0.90506034 3320 Q8N3C0 ASCC3 Activating signal cointegrator 1 complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 56.947 50.173 3;4 5.2818E-05 68420 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.52 62.636 32263000 27605000 0 4658000 0 0 0 0 0 0 0 0 0 0 0 0 6167 3320 5616 52525;52526;52527 41480;41481;41482 41481 3 CLQEDVK Unmodified 890.41677 0.41676744 3782 Q96CS2 HAUS1 HAUS augmin-like complex subunit 1 yes yes 0 0 0 By MS/MS 2 0 1 1 17.986 14.566 2 0.047355 19164 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.741 45.805 20376000 0 20376000 0 0 0 0 0 0 0 0 0 0 0 0 0 6168 3782 5617 52528 41483 41483 1 CLQEESVVQCEELK Unmodified 1749.7913 0.79133572 3242 Q8IWJ2 GCC2 GRIP and coiled-coil domain-containing protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 61.754 55.879 2 7.6186E-24 71773 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 150.46 114.95 20352000 0 20352000 0 0 0 0 0 0 0 0 0 0 0 0 0 6169 3242 5618 52529 41484 41484 1 CLQNENLIDK Unmodified 1245.6023 0.60233638 242 O15027 SEC16A Protein transport protein Sec16A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 41.247 41.656 2 0.0029838 46443 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 78.149 44.791 18139000 0 0 0 0 0 0 0 0 5789200 0 0 0 6362500 0 5987100 6170 242 5619 52530;52531;52532;52533;52534 41485;41486;41487;41488;41489 41488 5 CLQNPSSDIR Unmodified 1188.5557 0.55572054 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 32.328 32.727 2 0.0047532 34623 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.692 39.757 24390000 0 0 0 0 0 6764200 0 0 0 4959000 0 7008900 0 0 5658200 6171 3641 5620 52535;52536;52537;52538 41490;41491;41492 41491 3 CLQNPSSDIRLVAEK Unmodified 1728.8829 0.88286834 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 1 By MS/MS 2 0 1 1 67.22 63.476 3 0.044591 78540 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 30.961 24.381 5753700 0 0 5753700 0 0 0 0 0 0 0 0 0 0 0 0 6172 3641 5621 52539 41493 41493 1 CLQTLLDTK Unmodified 1090.5692 0.56924534 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 62.467 61.285 2 0.011712 82409 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.743 47.016 176870000 3761400 142550000 0 0 3465700 2997900 2690100 0 1550200 5633600 3351000 4049400 3267400 3556000 0 6173 3641 5622 52540;52541;52542;52543;52544;52545;52546;52547;52548;52549;52550 41494;41495;41496 41496 3 CLSSATDPQTK Unmodified 1206.5551 0.55505184 614 O94979 SEC31A Protein transport protein Sec31A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 16.201 16.485 2 0.0082746 15657 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 51.927 36.045 22321000 0 0 0 1245200 0 0 0 0 1733400 2037900 3283700 7175500 2544200 0 4301300 6174 614 5623 52551;52552;52553;52554;52555;52556;52557 41497;41498;41499;41500 41499 4 CLSVMEAK Unmodified 936.44087 0.4408737 1578 P49588 AARS Alanine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS 2 0 1 1 41.95 36.855 2 0.01951 47806 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.794 47.988 37897000 0 37897000 0 0 0 0 0 0 0 0 0 0 0 0 0 6175 1578 5624 52558 41501;41502;41503 41503 3 CLTPLVPEDLRK Unmodified 1439.7806 0.7806351 382 O60216 RAD21 Double-strand-break repair protein rad21 homolog yes yes 0 0 1 By matching By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 68.213 68.386 3 0.014766 78331 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 33.589 23.537 13435000 0 0 0 0 848100 0 0 0 0 0 3068000 4848700 0 0 4669800 6176 382 5625 52559;52560;52561;52562 41504 41504 1 CLTQQAVALQR Unmodified 1286.6765 0.67650438 465 O75153 CLUH Clustered mitochondria protein homolog yes yes 0 0 0 By MS/MS 10 0 1 1 47.203 47.26 2 0.00040575 53335 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 105.57 41.303 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6177 465 5626 52563 41505 41505 1 CLTTDEYDGHSTYPSHQYQ Unmodified 2300.928 0.92804021 1262 P30043 BLVRB Flavin reductase (NADPH) yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 46.945 44.016 3 0.00017016 56644 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.848 58.847 93904000 0 72790000 1600600 0 0 0 0 0 0 0 0 0 0 0 19513000 6178 1262 5627 52564;52565;52566 41506;41507;41508 41506 3 CLVLTGFGGYDK Unmodified 1328.6435 0.64347291 4019 Q99536 VAT1 Synaptic vesicle membrane protein VAT-1 homolog yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 2 1 1 1 1 77.847 77.9 2 0.0027374 90524 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 62.303 43.032 56421000 0 0 0 4300200 2776800 5278100 0 4372900 0 5689300 9061800 7387500 4610600 4782800 8160900 6179 4019 5628 52567;52568;52569;52570;52571;52572;52573;52574;52575;52576;52577 41509;41510;41511;41512;41513;41514;41515;41516 41516 8 CLYASVLTAQPR Unmodified 1377.7075 0.70747015 980 P13639 EEF2 Elongation factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 2 1 1 2 1 1 1 1 1 70.499 70.564 2 0.0001659 81340 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 85.377 46.229 198600000 0 0 0 10784000 4896800 6697900 5430100 0 9566800 8163800 24515000 37550000 10007000 23324000 57669000 6180 980 5629 52578;52579;52580;52581;52582;52583;52584;52585;52586;52587;52588;52589;52590 41517;41518;41519;41520;41521;41522;41523;41524;41525;41526;41527 41524 10 CMDVYTPK Unmodified 1012.4358 0.43578832 1956 P67870 CSNK2B Casein kinase II subunit beta yes yes 0 0 0 By MS/MS 2 0 1 1 40.556 35.503 2 0.027071 46171 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.77 66.577 76885000 0 76885000 0 0 0 0 0 0 0 0 0 0 0 0 0 6181 1956 5630 52591 41528;41529 41529 2 CMMAQYNRHDSPEDVK Unmodified 1979.8288 0.82880063 1313 P31948 STIP1 Stress-induced-phosphoprotein 1 yes yes 0 0 1 By MS/MS By MS/MS 6 4 1 1 1 1 36.826 33.844 3;4 0.0043908 35619 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.237 39.205 88691000 83621000 0 0 0 0 0 0 0 0 0 0 0 0 0 5070000 6182 1313 5631 52592;52593 41530;41531 41530 1 CMMAQYNRHDSPEDVK Oxidation (M) 1995.8237 0.82371525 1313 P31948 STIP1 Stress-induced-phosphoprotein 1 yes yes 0 1 1 By MS/MS 2 0 1 1 31.438 25.594 3 0.00083873 35913 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.097 52.278 17725000 17725000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6183 1313 5631 52594 41532 41532 1954 1 CMPTFQFFK Unmodified 1204.5409 0.5409221 923 P10599 TXN Thioredoxin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 3 6 1 1 1 1 1 1 1 1 1 87.119 85.446 2 0.0045489 98595 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.472 81.106 270730000 153480000 64271000 2631200 2382000 0 0 0 1975600 0 0 4159800 3742500 0 3362600 34725000 6184 923 5632 52595;52596;52597;52598;52599;52600;52601;52602;52603 41533;41534;41535;41536 41534 4 CMPTFQFFK Oxidation (M) 1220.5358 0.53583672 923 P10599 TXN Thioredoxin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 79.101 78.461 2 0.017804 100190 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.189 65.408 388280000 292030000 0 0 28521000 3447200 4343500 4255800 2755500 2730600 3962900 13711000 17064000 5399200 10066000 0 6185 923 5632 52604;52605;52606;52607;52608;52609;52610;52611;52612;52613;52614;52615 41537;41538;41539;41540 41537 1188 3 CMQEIPQEQIK Unmodified 1402.6585 0.65847105 3384 Q8NB16 MLKL Mixed lineage kinase domain-like protein yes yes 0 0 0 By MS/MS 2 0 1 1 52.27 46.496 2 2.0165E-12 60323 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 156.62 141.85 17320000 0 17320000 0 0 0 0 0 0 0 0 0 0 0 0 0 6186 3384 5633 52616 41541 41541 1 CMVEVPQELETSTGHSLEK Unmodified 2173.0031 0.003119407 2661 Q32MZ4 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.71 3.81 2 1 4 2 1 1 1 1 1 73.99 72.548 3 5.0503E-06 82835 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.737 65.896 190800000 0 148240000 2656800 0 0 0 0 0 0 6840400 12672000 11320000 0 0 9074200 6187 2661 5634 52617;52618;52619;52620;52621;52622;52623 41542;41543;41544;41545;41546;41547;41548 41544 6 CMVEVPQELETSTGHSLEK Oxidation (M) 2188.998 0.99803403 2661 Q32MZ4 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.57 3.85 3 1 3 3 1 1 1 1 67.503 64.814 3 4.7033E-08 73913 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 78.021 68.975 132150000 0 104020000 2815400 0 0 0 0 3339400 0 0 0 14591000 0 0 7385100 6188 2661 5634 52624;52625;52626;52627;52628;52629;52630 41549;41550;41551;41552;41553;41554;41555 41555 4330 6 CNAEEHVRVTK Unmodified 1341.6459 0.64593253 943 P11279 LAMP1 Lysosome-associated membrane glycoprotein 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 14.144 10.979 3 0.0006588 14076 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 89.403 78.191 150700000 128730000 0 21968000 0 0 0 0 0 0 0 0 0 0 0 0 6189 943 5635 52631;52632 41556;41557;41558 41557 3 CNAIINEDPNAR Unmodified 1385.6358 0.63576177 378 O43896 KIF1C Kinesin-like protein KIF1C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 37.058 37.19 2 2.4878E-05 41691 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 93.058 73.271 45779000 0 0 0 5396000 3968800 3286800 3319700 2329300 3748600 3519300 5356100 6053000 5104300 3696900 0 6190 378 5636 52633;52634;52635;52636;52637;52638;52639;52640;52641;52642;52643 41559;41560;41561;41562;41563;41564;41565;41566;41567;41568;41569 41568 11 CNALVTSVDSAPAAVK Unmodified 1601.8083 0.80830641 3746 Q96B01 RAD51AP1 RAD51-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 62.822 62.456 2 4.917E-21 71141 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 116.54 101.57 169330000 0 21710000 0 9861300 7801300 9912400 14847000 14807000 9156500 9317900 17868000 14840000 12052000 7432500 19726000 6191 3746 5637 52644;52645;52646;52647;52648;52649;52650;52651;52652;52653;52654;52655;52656 41570;41571;41572;41573;41574;41575;41576;41577;41578;41579;41580;41581;41582 41575 13 CNEIINWLDK Unmodified 1303.6231 0.62307182 934 P11142 HSPA8 Heat shock cognate 71 kDa protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 83.163 82.512 2 1.3424E-06 103185 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 151.22 132.99 619990000 0 120270000 6863000 7022900 10075000 28410000 12469000 21910000 25690000 34744000 38125000 34309000 22788000 50854000 206470000 6192 934 5638 52657;52658;52659;52660;52661;52662;52663;52664;52665;52666;52667;52668;52669;52670;52671 41583;41584;41585;41586;41587;41588;41589;41590;41591;41592;41593;41594;41595;41596;41597 41586 15 CNELQDIEK Unmodified 1147.5179 0.51793805 389 O60264;P28370 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 38.745 38.801 2 0.0030604 41744 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 91.853 65.959 30959000 0 0 0 3353600 2448100 3739500 3532200 0 2503400 3870900 3661300 0 3333900 4515900 0 6193 389 5639 52672;52673;52674;52675;52676;52677;52678;52679;52680;52681 41598;41599;41600;41601;41602;41603;41604;41605;41606 41603 9 CNEPAVWSQLAK Unmodified 1401.6711 0.67108465 2040 Q00610 CLTC Clathrin heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.831 70.903 2 0.00010418 81537 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 94.692 44.652 192310000 0 0 0 7064000 5899700 13427000 6465700 6925600 6330800 16778000 22166000 27194000 15860000 16650000 47550000 6194 2040 5640 52682;52683;52684;52685;52686;52687;52688;52689;52690;52691;52692;52693 41607;41608;41609;41610;41611;41612;41613;41614;41615;41616;41617;41618;41619;41620 41608 14 CNEQPNRVEIYEK Unmodified 1677.7781 0.77806891 3050 Q7L576;Q96F07 CYFIP1;CYFIP2 Cytoplasmic FMR1-interacting protein 1;Cytoplasmic FMR1-interacting protein 2 yes no 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 33.465 33.661 3 0.024073 36286 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 33.227 21.437 53635000 0 0 0 3281600 2767400 3679400 2345100 0 0 0 5462500 10738000 7701100 8120400 9539800 6195 3050 5641 52694;52695;52696;52697;52698;52699;52700;52701;52702 41621 41621 1 CNNVLYIR Unmodified 1050.528 0.52804923 1890 P62306 SNRPF Small nuclear ribonucleoprotein F yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 50.673 50.826 2 1.435E-12 56508 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 170.17 154.02 1066500000 0 0 0 69690000 75658000 67390000 67610000 62680000 62198000 109190000 111310000 112360000 91837000 85243000 151350000 6196 1890 5642 52703;52704;52705;52706;52707;52708;52709;52710;52711;52712;52713;52714 41622;41623;41624;41625;41626;41627;41628;41629;41630;41631;41632;41633;41634;41635;41636;41637;41638;41639;41640 41637 18 CNSFLHNK Unmodified 1018.4654 0.46544897 4745 Q9NYL2 ZAK Mitogen-activated protein kinase kinase kinase MLT yes yes 0 0 0 By MS/MS 2 0 1 1 23.088 18.191 2 0.012025 26015 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.43 30.583 7168200 7168200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6197 4745 5643 52715 41641 41641 1 CNSLEEIK Unmodified 991.46445 0.46444592 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS 10 0 1 1 29.972 30.675 2 0.0072257 32177 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.37 5.4543 13885000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13885000 6198 2344 5644 52716 41642 41642 1 CNTDQAGRPK Unmodified 1145.5248 0.52475476 1333 P33992 MCM5 DNA replication licensing factor MCM5 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 5.6618 2.3355 3 0.0014473 4350 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.696 80.237 323770000 52272000 271500000 0 0 0 0 0 0 0 0 0 0 0 0 0 6199 1333 5645 52717;52718;52719 41643;41644 41643 2 CNTNTAIELK Unmodified 1162.5652 0.56522259 228 O14929 HAT1 Histone acetyltransferase type B catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.24 2 1 10 1 2 1 1 1 1 1 1 1 1 1 1 36.495 35.903 2 0.000517 39634 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 126.07 82.26 373150000 0 268130000 0 6706100 0 0 3574800 5547100 4327100 15022000 12926000 14513000 7848900 11441000 23109000 6200 228 5646 52720;52721;52722;52723;52724;52725;52726;52727;52728;52729;52730;52731;52732 41645;41646;41647;41648;41649;41650;41651;41652;41653 41645 9 CPADNPGLVQAQPR Unmodified 1521.7358 0.73581017 2854 Q68CZ2 TNS3 Tensin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 40.172 40.409 2 1.145E-19 44024 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 137.98 128.54 47382000 0 0 0 0 3930000 6875700 4627200 3303300 0 6691000 6665600 4984300 0 0 10305000 6201 2854 5647 52733;52734;52735;52736;52737;52738;52739;52740;52741;52742;52743 41654;41655;41656;41657;41658;41659;41660;41661;41662;41663;41664 41657 11 CPAPGPHPALVEGR Unmodified 1456.7245 0.7245172 2570 Q15742 NAB2 NGFI-A-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.603 37.783 3 0.00039164 41591 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 56.599 51.842 105040000 0 0 0 6527900 4772100 9610100 9430200 6236500 4768300 9112300 13806000 12177000 9570600 5618000 13409000 6202 2570 5648 52744;52745;52746;52747;52748;52749;52750;52751;52752;52753;52754;52755 41665;41666;41667;41668;41669;41670;41671;41672;41673 41668 8 CPARPPPSGSQGLLEEMLAASSSK Unmodified 2469.1992 0.19919345 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 1 By MS/MS 10 0 1 1 85.395 85.563 3 1.106E-14 98846 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.389 68.329 5880600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5880600 6203 4285 5649 52756 41674 41674 1 CPASEPGLDATTASESR Unmodified 1747.7683 0.76829209 2646 Q27J81 INF2 Inverted formin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.235 38.416 2 2.9793E-36 43119 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 147.71 141.27 148550000 0 0 0 8592900 8801300 11334000 11638000 9937500 7527700 17027000 18103000 13488000 12277000 13383000 16443000 6204 2646 5650 52757;52758;52759;52760;52761;52762;52763;52764;52765;52766;52767;52768 41675;41676;41677;41678;41679;41680;41681;41682;41683;41684;41685;41686 41685 12 CPDIATQLAGTK Unmodified 1273.6336 0.63363651 1547 P48637 GSS Glutathione synthetase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.8 3.92 2 3 1 1 1 1 1 56.388 52.942 2 0.0014428 59216 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 79.311 55.542 436500000 0 424820000 1685400 9996300 0 0 0 0 0 0 0 0 0 0 0 6205 1547 5651 52769;52770;52771;52772;52773 41687;41688;41689;41690 41689 4 CPELREPLLAHVR Unmodified 1588.8508 0.85078035 3663 Q92797 SYMPK Symplekin yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 58.322 58.613 4 0.022821 65754 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 27.862 19.041 25840000 0 0 0 0 0 4992000 0 0 2693700 0 0 5805300 3118800 2176700 7053500 6206 3663 5652 52774;52775;52776;52777;52778;52779 41691 41691 1 CPENAFFLDHVR Unmodified 1503.6929 0.69288272 121 O00159 MYO1C Unconventional myosin-Ic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 70.39 70.508 3 0.030221 80333 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 26.541 21.364 25480000 0 0 0 0 1616200 4663400 0 3662200 0 2563500 0 3083800 2426300 2626700 4837800 6207 121 5653 52780;52781;52782;52783;52784;52785;52786;52787 41692;41693 41692 2 CPEPCPPPK Unmodified 1080.4732 0.47323646 1140;4248 P22531;Q96RM1;Q9BYE4 SPRR2E;SPRR2F;SPRR2G Small proline-rich protein 2E;Small proline-rich protein 2F;Small proline-rich protein 2G no no 0 0 0 By MS/MS 10 0 1 1 19.289 19.143 2 0.0010919 19902 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 143.12 101.47 138650000 0 0 0 138650000 0 0 0 0 0 0 0 0 0 0 0 6208 1140;4248 5654 52788 41694;41695;41696 41695 3 CPFIVALNK Unmodified 1060.5739 0.57393679 437 O60841 EIF5B Eukaryotic translation initiation factor 5B yes yes 0 0 0 By MS/MS 2 0 1 1 79.737 71.606 2 0.0087078 94239 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.369 52.275 64193000 64193000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6209 437 5655 52789 41697 41697 1 CPFTGNVSIR Unmodified 1149.5601 0.56007764 1888 P62280 RPS11 40S ribosomal protein S11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 52.907 53.048 2 0.00021647 59953 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 141.2 123.81 388540000 0 0 0 16404000 16400000 25140000 16463000 15076000 0 41760000 40616000 64864000 69926000 35434000 46453000 6210 1888 5656 52790;52791;52792;52793;52794;52795;52796;52797;52798;52799;52800 41698;41699;41700;41701;41702;41703;41704;41705;41706 41698 9 CPFYAAEQDK Unmodified 1227.523 0.52302343 1282 P30519 HMOX2 Heme oxygenase 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching 10 0 4 1 1 1 1 37.282 37.157 2 0.036436 41727 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 50.805 38.448 8534900 0 0 0 2397300 2150300 0 0 0 1766500 0 0 0 0 2220800 0 6211 1282 5657 52801;52802;52803;52804 41707 41707 1 CPGAAGVLGPHTEYK Unmodified 1555.7453 0.74531222 4155 Q9BU02 THTPA Thiamine-triphosphatase yes yes 0 0 0 By MS/MS 2 0 1 1 51.563 43.602 2 0.0011307 60218 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.741 54.524 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6212 4155 5658 52805 41708 41708 1 CPGPLAVANGVVK Unmodified 1280.6911 0.69109181 5301 Q9Y6Y8 SEC23IP SEC23-interacting protein yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 67.591 67.24 2 0.0015962 76220 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.558 46.896 63518000 0 23642000 0 1682300 1357300 2157600 2477900 1641200 2608600 4054600 3656700 6000000 3627200 3959400 6652500 6213 5301 5659 52806;52807;52808;52809;52810;52811;52812;52813;52814;52815;52816;52817;52818 41709;41710;41711;41712;41713;41714 41711 5 CPLADTHMNSSEK Oxidation (M) 1504.6286 0.62862749 5219 Q9Y546 LRRC42 Leucine-rich repeat-containing protein 42 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 14.923 11.49 3 0.001262 15496 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.215 62.383 22021000 0 22021000 0 0 0 0 0 0 0 0 0 0 0 0 0 6214 5219 5660 52819;52820 41715;41716 41715 6625 2 CPLDPYFIMPDK Oxidation (M) 1510.6836 0.68362317 1333 P33992 MCM5 DNA replication licensing factor MCM5 yes yes 0 1 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 81.718 78.207 2 0.0033598 97055 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.311 71.385 103290000 0 99925000 3368200 0 0 0 0 0 0 0 0 0 0 0 0 6215 1333 5661 52821;52822;52823 41717;41718;41719 41717 1999 3 CPLDPYFIMPDK Unmodified 1494.6887 0.68870855 1333 P33992 MCM5 DNA replication licensing factor MCM5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.8 3.12 3 1 1 1 2 1 1 88.245 84.546 2 1.3046E-31 105798 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 192.38 170.64 230340000 7382800 215520000 3644500 0 0 0 0 0 0 0 0 0 0 0 3795300 6216 1333 5661 52824;52825;52826;52827;52828 41720;41721;41722;41723;41724 41720 5 CPLPPMAPETPPVPSSASSSSSSSSSPFK Oxidation (M) 2918.3314 0.33138942 1628 P50548 ERF ETS domain-containing transcription factor ERF yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 75.428 75.512 3 1.7485E-15 86736 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 54.441 47.792 18291000 0 0 0 0 0 5257100 3906900 0 0 5657100 0 0 3470000 0 0 6217 1628 5662 52829;52830;52831;52832 41725;41726;41727;41728 41727 2610 4 CPLPPMAPETPPVPSSASSSSSSSSSPFK Unmodified 2902.3365 0.3364748 1628 P50548 ERF ETS domain-containing transcription factor ERF yes yes 0 0 0 By matching By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 80.277 80.455 3 2.613E-08 93126 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 38.196 32.577 11999000 0 0 0 0 0 0 847800 2832200 0 0 3688800 4630100 0 0 0 6218 1628 5662 52833;52834;52835;52836 41729;41730 41729 2 CPLSGACYSPEFK Unmodified 1514.6534 0.65338567 1721 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 65.898 60.223 2 2.4755E-13 79945 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 123.79 118.85 219460000 7993700 207030000 4431400 0 0 0 0 0 0 0 0 0 0 0 0 6219 1721 5663 52837;52838;52839;52840 41731;41732;41733;41734;41735 41734 5 CPLYEANGQAVPK Unmodified 1445.6973 0.6972994 397 O60341 KDM1A Lysine-specific histone demethylase 1A yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 46.396 46.11 2 9.1476E-47 58360 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 195.83 173.74 235110000 0 66749000 0 8627500 10377000 12187000 8263900 12686000 11164000 13067000 18939000 20237000 18060000 13819000 20940000 6220 397 5664 52841;52842;52843;52844;52845;52846;52847;52848;52849;52850;52851;52852;52853 41736;41737;41738;41739;41740;41741;41742;41743;41744;41745;41746;41747;41748 41740 11 CPMVTSDIAQRK Unmodified 1404.6854 0.6853545 4407 Q9H582 ZNF644 Zinc finger protein 644 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 40.564 35.452 3 0.0025798 48903 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.435 45.495 11383000 9303200 0 2080200 0 0 0 0 0 0 0 0 0 0 0 0 6221 4407 5665 52854;52855 41749 41749 1 CPNLTHLNLSGNK Unmodified 1466.73 0.72999651 1404 P39687 ANP32A Acidic leucine-rich nuclear phosphoprotein 32 family member A yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 6.57 3.96 3 4 1 1 1 1 1 1 1 53.945 51.677 2;3 2.2797E-106 56482 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 216.97 169.78 293240000 127550000 25425000 6985600 0 0 0 0 0 0 0 26067000 39564000 0 21917000 45733000 6222 1404 5666 52856;52857;52858;52859;52860;52861;52862 41750;41751;41752;41753;41754;41755;41756 41756 7 CPNLTYLNLSGNK Unmodified 1492.7344 0.73441319 4149 Q9BTT0 ANP32E Acidic leucine-rich nuclear phosphoprotein 32 family member E yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 6 4 2 2 1 1 1 1 75.659 72.497 2 2.8812E-21 92718 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 170.52 143.27 98232000 23550000 19947000 0 0 0 0 0 0 0 0 0 0 28010000 26725000 0 6223 4149 5667 52863;52864;52865;52866 41757;41758;41759 41758 3 CPNPPVQENFDVNK Unmodified 1656.7566 0.75660519 795 P05090 APOD Apolipoprotein D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 53.632 53.396 2 0.0015904 61054 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 69.276 58.524 40225000 0 0 0 20734000 3632900 0 9862200 5996200 0 0 0 0 0 0 0 6224 795 5668 52867;52868;52869;52870 41760;41761;41762 41762 3 CPPTYPDVVPEIELK Unmodified 1755.8753 0.87532334 4821 Q9P2K8 EIF2AK4 Eukaryotic translation initiation factor 2-alpha kinase 4 yes yes 0 0 0 By MS/MS 2 0 1 1 89.192 84.32 2 1.4625E-06 104864 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.86 103.44 26795000 0 26795000 0 0 0 0 0 0 0 0 0 0 0 0 0 6225 4821 5669 52871 41763 41763 1 CPPVQPYPPCQQK Unmodified 1597.7381 0.73811836 4248 Q9BYE4 SPRR2G Small proline-rich protein 2G yes yes 0 0 0 By MS/MS 10 0 1 1 40.973 40.468 2 0.0006189 45316 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 75.682 60.11 20368000 0 0 0 20368000 0 0 0 0 0 0 0 0 0 0 0 6226 4248 5670 52872 41764 41764 1 CPPVTPSPPCQPK Unmodified 1463.6901 0.69010553 1140 P22531;Q96RM1 SPRR2E;SPRR2F Small proline-rich protein 2E;Small proline-rich protein 2F yes no 0 0 0 By MS/MS 10 0 1 1 40.96 40.456 2 3.5193E-09 45858 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 132.91 96.579 40900000 0 0 0 40900000 0 0 0 0 0 0 0 0 0 0 0 6227 1140 5671 52873 41765;41766 41766 2 CPQELSRDPSGTK Unmodified 1473.6882 0.68819127 2476 Q15021 NCAPD2 Condensin complex subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 20.23 16.528 3 0.011832 20397 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 49.12 36.353 87690000 5955300 76699000 5035700 0 0 0 0 0 0 0 0 0 0 0 0 6228 2476 5672 52874;52875;52876;52877 41767;41768 41768 2 CPQPCPPQQCQQK Unmodified 1654.7014 0.70141527 1140 P22531 SPRR2E Small proline-rich protein 2E no no 0 0 0 By MS/MS 10 0 2 2 19.345 19.199 2;3 1.074E-11 19420 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 122.13 119.4 21423000 0 0 0 21423000 0 0 0 0 0 0 0 0 0 0 0 6229 1140 5673 52878;52879 41769;41770 41769 1 CPSTHSEELHDCIQK Unmodified 1839.788 0.78798167 1541 P48507 GCLM Glutamate--cysteine ligase regulatory subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 6 2 2 2 28.781 24.439 3;4 7.9059E-11 32372 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 111.12 99.837 122400000 9698700 33863000 78836000 0 0 0 0 0 0 0 0 0 0 0 0 6230 1541 5674 52880;52881;52882;52883;52884;52885 41771;41772;41773 41771 2 CPTFRREADGSETPEPFAAEAK Unmodified 2465.1281 0.128137 3039 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 0 0 2 By MS/MS 2 0 2 2 62.939 54.671 3;4 1.5487E-06 73785 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.251 57.268 29078000 29078000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6231 3039 5675 52886;52887 41774;41775 41774 2 CPTLEQYAMR Oxidation (M) 1283.5638 0.56384238 1548 P48643 CCT5 T-complex protein 1 subunit epsilon yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.487 46.653 2 0.00073294 53099 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 109.71 80.553 296410000 0 0 0 13733000 11770000 33825000 15969000 13072000 12932000 28858000 34868000 34338000 29173000 22282000 45596000 6232 1548 5676 52888;52889;52890;52891;52892;52893;52894;52895;52896;52897;52898;52899 41776;41777;41778;41779;41780;41781;41782;41783;41784;41785;41786;41787;41788 41787 2458 13 CPTLEQYAMR Unmodified 1267.5689 0.56892776 1548 P48643 CCT5 T-complex protein 1 subunit epsilon yes yes 0 0 0 By MS/MS 10 0 1 1 57.219 57.272 2 0.012682 65199 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 78.334 68.348 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6233 1548 5676 52900 41789 41789 1 CPTPGCNSLGHLTGK Unmodified 1597.7341 0.73409561 635 O95251 KAT7 Histone acetyltransferase KAT7 yes yes 0 0 0 By MS/MS 2 0 1 1 49.894 41.993 3 0.032527 58221 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 20.939 9.8336 7089400 7089400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6234 635 5677 52901 41790 41790 1 CPVAMEEADDTVAPSSTFCK Unmodified 2213.9279 0.92790555 1571 P49407 ARRB1 Beta-arrestin-1 yes yes 0 0 0 By MS/MS 2 0 2 2 72.522 66.795 2;3 2.4621E-58 84709 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 175.15 172.59 36479000 0 36479000 0 0 0 0 0 0 0 0 0 0 0 0 0 6235 1571 5678 52902;52903 41791;41792 41791 2 CPVAYHSGDACLAAGCSVIASNSIICTAHFTARK Unmodified 3664.7007 0.70071035 717 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 yes yes 0 0 1 By MS/MS 2 0 1 1 85.877 77.747 5 0.039526 101222 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 8.8378 2.9965 11793000 11793000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6236 717 5679 52904 41793 41793 1 CPVEIPPIR Unmodified 1079.5798 0.57975045 2781 Q5T749 KPRP Keratinocyte proline-rich protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 67.338 67.389 2 0.0029042 78149 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 135.84 125.42 101880000 0 0 0 56403000 4663700 5132500 7199100 0 4146800 4779400 0 4966900 9761700 2586700 2238300 6237 2781 5680 52905;52906;52907;52908;52909;52910;52911;52912;52913;52914 41794;41795;41796;41797;41798;41799;41800;41801;41802;41803;41804;41805 41801 12 CPVEIPPIRR Unmodified 1235.6809 0.68086147 2781 Q5T749 KPRP Keratinocyte proline-rich protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 54.81 54.78 3 0.00064375 63241 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 79.986 70.298 70262000 0 0 0 40558000 4165600 3492200 5102900 0 2694200 0 4979100 0 9270100 0 0 6238 2781 5681 52915;52916;52917;52918;52919;52920;52921 41806;41807;41808;41809 41808 4 CPVTIPEDQK Unmodified 1185.57 0.56997362 662 O95453 PARN Poly(A)-specific ribonuclease PARN yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 37.338 37.021 2 0.011566 46301 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.37 68.666 57958000 0 10034000 0 0 0 4610000 3978400 0 3929400 6477000 6883400 0 8045300 6225500 7775600 6239 662 5682 52922;52923;52924;52925;52926;52927;52928;52929;52930 41810;41811;41812 41811 2 CPVTIPEDQKK Unmodified 1313.6649 0.66493664 662 O95453 PARN Poly(A)-specific ribonuclease PARN yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 33.299 28.737 3 0.01475 37677 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 38.402 26.87 17444000 0 17444000 0 0 0 0 0 0 0 0 0 0 0 0 0 6240 662 5683 52931;52932 41813;41814 41813 2 CPVVLAPLLYPEK Unmodified 1497.8265 0.82652266 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 88.205 88.275 2 3.5478E-08 102432 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 105.98 80.316 44363000 0 0 0 1318200 2791500 3361100 2070500 3163400 2511000 5402600 4307900 5847100 2508800 3605400 7475700 6241 19 5684 52933;52934;52935;52936;52937;52938;52939;52940;52941;52942;52943;52944 41815;41816;41817;41818;41819;41820;41821;41822;41823;41824;41825;41826;41827 41816 13 CPYCPMEQSPGDAK Unmodified 1638.6476 0.64764837 4446 Q9H871 RMND5A Protein RMD5 homolog A yes yes 0 0 0 By MS/MS 2 0 1 1 42.055 36.959 2 0.015373 47959 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.466 47.2 12790000 0 12790000 0 0 0 0 0 0 0 0 0 0 0 0 0 6242 4446 5685 52945 41828 41828 1 CQDEELEK Unmodified 1049.4335 0.43353972 632 O95239 KIF4A Chromosome-associated kinesin KIF4A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 11.548 11.587 2 0.049549 9678 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.082 35.713 7166700 0 0 0 973430 1094800 1602700 0 0 0 1411000 0 0 0 0 2084800 6243 632 5686 52946;52947;52948;52949;52950 41829 41829 1 CQEVISWLDANTLAEK Unmodified 1875.9037 0.90366336 908 P0DMV9;P0DMV8 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 86.986 87.138 2 0.00035058 101052 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 82.543 74.819 19451000 0 0 0 0 0 0 0 0 1541500 4526400 0 0 0 0 13383000 6244 908 5687 52951;52952;52953 41830;41831 41830 2 CQGSGDDNLTSLGTLNFPGR Unmodified 2107.9593 0.95928076 775 P04150 NR3C1 Glucocorticoid receptor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 1 2 2 2 2 2 2 2 2 2 2 2 82.089 82.171 2;3 9.9976E-67 94807 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 185.12 181.55 198010000 0 0 0 2268400 10077000 13945000 10601000 14089000 11430000 20859000 20175000 29139000 13187000 20202000 32035000 6245 775 5688 52954;52955;52956;52957;52958;52959;52960;52961;52962;52963;52964;52965;52966;52967;52968;52969;52970;52971;52972;52973;52974;52975;52976 41832;41833;41834;41835;41836;41837;41838;41839;41840;41841;41842;41843 41834 12 CQGVVCAMK Unmodified 1051.4613 0.46129157 517 O75534 CSDE1 Cold shock domain-containing protein E1 yes yes 0 0 0 By MS/MS 2 0 1 1 30.273 25.88 2 0.005228 33912 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.81 81.469 17919000 0 17919000 0 0 0 0 0 0 0 0 0 0 0 0 0 6246 517 5689 52977 41844;41845 41845 2 CQHLQAEK Unmodified 1012.476 0.47601365 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 5.8637 5.9985 2 0.0065388 3720 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 100.02 52.169 23953000 0 0 0 3427200 0 3432700 4556300 2600700 3180700 0 1242300 1665300 991760 1136800 1719400 6247 1356 5690 52978;52979;52980;52981;52982;52983;52984;52985;52986;52987 41846;41847;41848;41849 41847 4 CQIIYPR Unmodified 948.48512 0.48512178 2557 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 41.194 41.378 2 0.026085 46240 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 79.454 58.3 19534000 0 0 0 0 0 0 3895500 2998500 0 8136200 0 0 4503300 0 0 6248 2557 5691 52988;52989;52990;52991 41850;41851;41852 41852 3 CQLEINFNTLQTK Unmodified 1607.7977 0.79774172 356;971;1359 O43707;P12814;P35609 ACTN4;ACTN1;ACTN2 Alpha-actinin-4;Alpha-actinin-1;Alpha-actinin-2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.01 1 1 8 1 1 1 1 1 1 2 1 1 79.674 79.215 2 1.334E-41 91444 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 174.4 168.16 138160000 0 10272000 8158700 0 0 11810000 0 0 2641600 5029700 15572000 26245000 0 13459000 44971000 6249 356;971;1359 5692 52992;52993;52994;52995;52996;52997;52998;52999;53000;53001 41853;41854;41855;41856;41857;41858;41859;41860;41861 41854 9 CQLLFALK Unmodified 991.55247 0.55247306 4109 Q9BRJ7 NUDT16L1 Protein syndesmos yes yes 0 0 0 By MS/MS 1.5 0.5 1 1 2 80.057 78.624 2 0.018796 102563 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.029 72.397 7640400 7640400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6250 4109 5693 53002;53003 41862 41862 1 CQNEQLQTAVTQQVSQIQQHK Unmodified 2495.2187 0.21868334 430 O60763 USO1 General vesicular transport factor p115 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 71.57 71.024 3 5.4584E-54 81033 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.28 98.3 174340000 0 38943000 0 3467300 5632900 16319000 10014000 8885700 7581800 16068000 11554000 15009000 11214000 10377000 19274000 6251 430 5694 53004;53005;53006;53007;53008;53009;53010;53011;53012;53013;53014;53015;53016;53017 41863;41864;41865;41866;41867;41868;41869;41870;41871;41872;41873;41874;41875;41876;41877 41867 15 CQPVFSFGNSEQTK Unmodified 1627.7301 0.73005609 1600 P49790 NUP153 Nuclear pore complex protein Nup153 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 63.628 63.72 2 0.0003697 73214 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 91.937 86.444 95058000 0 0 0 6604800 6991300 6010100 6702500 6306400 4535000 8724600 11157000 12487000 7302200 6347600 11888000 6252 1600 5695 53018;53019;53020;53021;53022;53023;53024;53025;53026;53027;53028;53029;53030 41878;41879;41880;41881;41882;41883;41884;41885;41886;41887;41888;41889;41890;41891 41887 14 CQQLAAYGILEK Unmodified 1392.7071 0.7071358 4137 Q9BT78 COPS4 COP9 signalosome complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 71.048 71.315 2 0.00042856 81318 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.102 68.95 34400000 0 0 0 0 0 0 0 0 0 0 6500200 8516700 5199100 4579200 9605000 6253 4137 5696 53031;53032;53033;53034;53035 41892;41893;41894;41895;41896;41897 41892 6 CQSLGGPAAAYATGK Unmodified 1450.6875 0.68746299 4999 Q9ULL5 PRR12 Proline-rich protein 12 yes yes 0 0 0 By MS/MS 2 0 1 1 50.94 45.194 2 9.1617E-05 58792 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.105 87.874 10059000 0 10059000 0 0 0 0 0 0 0 0 0 0 0 0 0 6254 4999 5697 53036 41898;41899 41898 2 CQSLTEDLEFRK Unmodified 1524.7242 0.72424243 1111 P20700 LMNB1 Lamin-B1 yes yes 0 0 1 By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 58.623 58.869 3 0.007157 66238 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.581 20.752 21550000 0 0 0 0 0 1810600 0 1960400 0 4175200 2805900 0 2333300 1927300 6537000 6255 1111 5698 53037;53038;53039;53040;53041;53042;53043 41900 41900 1 CQVASAASYDQPK Unmodified 1423.6402 0.64017845 4945 Q9UJX4 ANAPC5 Anaphase-promoting complex subunit 5 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 29.705 29.477 2 0.0017918 32220 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 61.65 39.564 6106700 0 0 0 2241800 1623400 0 2241500 0 0 0 0 0 0 0 0 6256 4945 5699 53044;53045;53046;53047;53048 41901;41902;41903;41904 41904 4 CQVEEARLK Unmodified 1131.5706 0.57064232 28 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 21.434 18.631 2 0.047679 23751 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 91.853 43.292 3866900 0 0 3866900 0 0 0 0 0 0 0 0 0 0 0 0 6257 28 5700 53049 41905 41905 1 CQVFEETQIGGER Unmodified 1551.6988 0.69875596 4065 Q99832 CCT7 T-complex protein 1 subunit eta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 53.465 53.602 2 1.1203E-41 60584 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 174.98 144.29 334810000 0 0 0 19930000 17549000 24396000 20471000 15711000 20928000 31083000 42120000 36699000 39346000 25576000 41003000 6258 4065 5701 53050;53051;53052;53053;53054;53055;53056;53057;53058;53059;53060;53061 41906;41907;41908;41909;41910;41911;41912;41913;41914;41915;41916;41917;41918;41919;41920;41921 41908 15 CQYISAVDK Unmodified 1082.5066 0.50664508 4584 Q9NR09 BIRC6 Baculoviral IAP repeat-containing protein 6 yes yes 0 0 0 By MS/MS 2 0 1 1 38.595 33.628 2 0.047825 43952 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.378 47.892 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6259 4584 5702 53062 41922 41922 1 CRDDSFFGETSHNYHK Unmodified 1998.8279 0.82787265 1473 P43243 MATR3 Matrin-3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 2 2 1 2 35.534 35.985 4 0.039679 40385 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 27.85 25.933 183330000 0 0 0 0 0 7517600 0 0 8772600 0 0 37762000 33686000 10406000 85189000 6260 1473 5703 53063;53064;53065;53066;53067;53068;53069;53070;53071 41923;41924 41923 2 CRGVFPENFTERVP Unmodified 1706.8199 0.81987415 162 O00499 BIN1 Myc box-dependent-interacting protein 1 yes yes 0 0 2 By MS/MS By matching By MS/MS 7.33 3.77 1 2 1 1 1 76.664 74.143 3 0.0039557 96265 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.55 70.058 25946000 17033000 0 0 0 0 0 0 0 0 0 2165200 0 0 0 6747800 6261 162 5704 53072;53073;53074 41925;41926 41926 2 CRIEISSPCCPR Unmodified 1533.685 0.68503693 2781 Q5T749 KPRP Keratinocyte proline-rich protein yes yes 0 0 1 By MS/MS By matching By MS/MS By matching 10 0 4 1 1 1 1 42.026 42.007 3 0.0026266 47340 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 59.116 46.136 56420000 0 0 0 45729000 0 2517400 4157900 0 0 0 0 0 4016600 0 0 6262 2781 5705 53075;53076;53077;53078 41927 41927 1 CRPLEENTADNEK Unmodified 1574.6995 0.69948424 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 1 By MS/MS 2 0 1 1 16.064 13.722 3 0.020099 17364 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 52.891 49.03 6529100 0 0 6529100 0 0 0 0 0 0 0 0 0 0 0 0 6263 1601 5706 53079 41928 41928 0 CRTSYEEFTHK Unmodified 1456.6405 0.6405128 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 1 By MS/MS 2 0 1 1 30.924 25.205 3 0.0078081 35351 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.115 40.749 34749000 34749000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6264 2930 5707 53080 41929 41929 1 CRVDLPLAVLSK Unmodified 1369.7752 0.77515579 4429 Q9H773 DCTPP1 dCTP pyrophosphatase 1 yes yes 0 0 1 By MS/MS By matching 10 0 2 1 1 79.354 79.555 3 0.014314 92121 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 40.066 33.337 13543000 0 0 0 0 0 0 0 0 0 0 0 7050300 0 0 6493200 6265 4429 5708 53081;53082 41930 41930 1 CSALEVEK Unmodified 934.44298 0.44298219 1983 P78415 IRX3 Iroquois-class homeodomain protein IRX-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 23.709 24.003 2 0.0067231 25487 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 98.458 66.523 181680000 0 0 0 0 0 12022000 15113000 13949000 11392000 20832000 28064000 27384000 24978000 0 27944000 6266 1983 5709 53083;53084;53085;53086;53087;53088;53089;53090;53091 41931;41932;41933 41932 3 CSASNRIIGAK Unmodified 1175.6081 0.60809046 1948 P63220 RPS21 40S ribosomal protein S21 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 23.767 19.266 3 0.019372 27138 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.762 33.017 374830000 362630000 12202000 0 0 0 0 0 0 0 0 0 0 0 0 0 6267 1948 5710 53092;53093 41934 41934 1 CSEEVSPMQLIK Unmodified 1419.6738 0.67378676 2838 Q63HN8 RNF213 E3 ubiquitin-protein ligase RNF213 yes yes 0 0 0 By MS/MS 2 0 1 1 79.987 75.275 2 2.88E-05 93788 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.52 92.07 20030000 0 20030000 0 0 0 0 0 0 0 0 0 0 0 0 0 6268 2838 5711 53094 41935 41935 1 CSEGSFLLTTFPR Unmodified 1513.7235 0.72351415 2508 Q15233 NONO Non-POU domain-containing octamer-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 84.863 84.97 2 1.2631E-06 98119 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 113.69 99.013 10279000 0 0 0 0 0 3330300 0 0 0 0 0 0 0 2186600 4762200 6269 2508 5712 53095;53096;53097;53098 41936;41937;41938;41939 41937 4 CSEQPSISDIK Unmodified 1262.5813 0.58126659 2411 Q14527 HLTF Helicase-like transcription factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.615 42.792 2 1.2439E-20 47641 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 166.19 124.74 695300000 0 0 0 43596000 56083000 48014000 53640000 55609000 51972000 64657000 83026000 83054000 52037000 48070000 55547000 6270 2411 5713 53099;53100;53101;53102;53103;53104;53105;53106;53107;53108;53109;53110 41940;41941;41942;41943;41944;41945;41946;41947;41948;41949;41950;41951;41952 41942 13 CSGDGVGAPR Unmodified 974.42398 0.42397808 275 O15355 PPM1G Protein phosphatase 1G yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 10.696 11.037 2 0.02179 9068 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.462 30.308 17741000 0 0 0 0 0 0 0 0 0 0 0 7373000 0 0 10368000 6271 275 5714 53111;53112 41953 41953 1 CSGNWMWAAK Unmodified 1209.5059 0.50593357 248 O15067 PFAS Phosphoribosylformylglycinamidine synthase yes yes 0 0 0 By MS/MS 2 0 1 1 73.681 65.485 2 0.017352 86680 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.504 66.504 15977000 15977000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6272 248 5715 53113 41954 41954 1 CSGPGLSPGMVR Unmodified 1216.5693 0.56926211 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 47.915 48.024 2 0.00016226 53162 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 85.533 72.906 185770000 0 0 0 9849000 6767900 17089000 7506100 7069200 9836900 15555000 33929000 0 16682000 19841000 41642000 6273 1124 5716 53114;53115;53116;53117;53118;53119;53120;53121;53122;53123;53124 41955;41956;41957;41958;41959;41960;41961;41962;41963;41964 41960 8 CSGPGLSPGMVR Oxidation (M) 1232.5642 0.56417674 1124 P21333 FLNA Filamin-A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 2 1 2 1 1 2 1 1 1 1 35.771 35.919 2 0.002263 38627 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 60.398 42.362 66346000 0 0 0 4256500 5742000 5362200 10102000 0 2505500 0 9659000 7299600 5385400 6612100 9422100 6274 1124 5716 53125;53126;53127;53128;53129;53130;53131;53132;53133;53134;53135;53136;53137;53138 41965;41966;41967;41968;41969;41970;41971;41972;41973;41974;41975 41968 1612 11 CSGPGLSPGMVRANLPQSFQVDTSK Unmodified 2632.2738 0.27375538 1124 P21333 FLNA Filamin-A yes yes 0 0 1 By MS/MS 2 0 1 1 85.469 77.339 3 5.6197E-12 100925 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.922 51.047 9813400 9813400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6275 1124 5717 53139 41976 41976 1 CSHFPDFSYSASSK Unmodified 1618.6722 0.67220686 3598 Q8WY36 BBX HMG box transcription factor BBX yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 65.371 59.342 3 0.00081154 79526 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.215 62.875 21981000 18894000 0 3086300 0 0 0 0 0 0 0 0 0 0 0 0 6276 3598 5718 53140;53141 41977;41978 41978 2 CSIPVLHSSAAMLK Unmodified 1512.7793 0.77925489 2354 Q13895 BYSL Bystin yes yes 0 0 0 By MS/MS 2 0 1 1 78.154 70.024 3 0.012642 92155 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 24.471 16.401 6722700 6722700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6277 2354 5719 53142 41979 41979 1 CSLASGATGGR Acetyl (Protein N-term) 1077.4873 0.48730662 423 O60678 PRMT3 Protein arginine N-methyltransferase 3 yes yes 1 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 37.139 37.221 2 0.0018017 41728 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 58.699 43.317 27303000 0 0 0 3272100 2621900 0 3186800 2721000 2858900 5565300 0 0 3822000 0 3254700 6278 423 5720 53143;53144;53145;53146;53147;53148;53149;53150 41980;41981;41982;41983 41983 4 CSLGQPHIAYFEE Unmodified 1549.6871 0.68712864 2264 Q13287 NMI N-myc-interactor yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 78.519 74.806 2 0.0077997 93124 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.062 56.192 52719000 0 49022000 3696500 0 0 0 0 0 0 0 0 0 0 0 0 6279 2264 5721 53151;53152 41984 41984 1 CSLPAEEDSVLEK Unmodified 1475.6814 0.68137456 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 57.361 56.638 2 5.9327E-21 71352 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.02 108.91 492230000 0 324150000 0 13439000 10859000 13850000 11944000 0 9617000 12471000 21999000 22752000 11181000 15953000 24021000 6280 1226 5722 53153;53154;53155;53156;53157;53158;53159;53160;53161;53162;53163;53164;53165;53166 41985;41986;41987;41988;41989;41990;41991;41992;41993;41994;41995;41996;41997;41998;41999 41989 15 CSLQAAAILDANDAHQTETSSSQVK Unmodified 2644.2399 0.23987229 4895 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 66.875 66.605 3 5.1243E-62 76810 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 89.891 69.452 219470000 0 8525600 0 7219300 11993000 19585000 17262000 17954000 15055000 24451000 22250000 23322000 13961000 15911000 21977000 6281 4895 5723 53167;53168;53169;53170;53171;53172;53173;53174;53175;53176;53177;53178;53179 42000;42001;42002;42003;42004;42005;42006;42007;42008;42009;42010;42011 42009 12 CSNILLNNSGQIK Unmodified 1459.7453 0.74531222 4752 Q9NYV4 CDK12 Cyclin-dependent kinase 12 yes yes 0 0 0 By MS/MS 2 0 1 1 63.05 57.156 2 0.019173 73369 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.172 39.732 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6282 4752 5724 53180 42012 42012 1 CSNLCTEIVEYTSK Unmodified 1702.7542 0.75422193 1171 P23921 RRM1 Ribonucleoside-diphosphate reductase large subunit yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 4 2 5 1 81.28 77.336 2;3 1.8307E-102 93994 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 226.04 219.38 411550000 0 408320000 3233800 0 0 0 0 0 0 0 0 0 0 0 0 6283 1171 5725 53181;53182;53183;53184;53185;53186 42013;42014;42015;42016;42017;42018 42013 5 CSPGSPTDPNATLSK Unmodified 1530.6984 0.69842161 4793 Q9P0K8 FOXJ2 Forkhead box protein J2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.318 32.504 2 0.00050888 35507 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 70.488 52.221 57758000 0 0 0 3470900 3869100 3518100 5801400 4513500 3625100 5474900 6683900 6960500 4826800 3930100 5084100 6284 4793 5726 53187;53188;53189;53190;53191;53192;53193;53194;53195;53196;53197;53198 42019;42020;42021;42022;42023;42024;42025;42026;42027 42024 9 CSPTVAFVEFPSSPQLK Unmodified 1892.9342 0.93423521 5054 Q9UPQ0 LIMCH1 LIM and calponin homology domains-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 85.649 85.715 2 1.0282E-13 99407 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 126.83 113.63 41785000 0 0 0 0 6577000 0 9430800 0 7387600 12401000 0 0 5987900 0 0 6285 5054 5727 53199;53200;53201;53202;53203;53204 42028;42029;42030;42031;42032;42033 42028 6 CSRCGDSVYAAEK Unmodified 1501.629 0.62896184 2607 Q16527 CSRP2 Cysteine and glycine-rich protein 2 yes yes 0 0 1 By MS/MS 2 0 1 1 18.101 15.615 3 0.0059574 19668 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 45.79 33.023 2827400 0 0 2827400 0 0 0 0 0 0 0 0 0 0 0 0 6286 2607 5728 53205 42034 42034 1 CSSVTGVQR Unmodified 992.47093 0.47092828 398 O60343 TBC1D4 TBC1 domain family member 4 yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By matching 10 0 7 1 1 1 1 1 1 1 12.275 12.407 2 0.02741 11036 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 49.418 23.681 7629800 0 0 0 0 725010 1098500 1040000 0 1350900 0 0 1565100 0 768250 1081900 6287 398 5729 53206;53207;53208;53209;53210;53211;53212 42035 42035 1 CSSYSESSEAAQLEEVTSVLEANSK Unmodified 2704.2021 0.20214938 3107 Q7Z5K2 WAPAL Wings apart-like protein homolog yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 94.703 90.651 3 5.6229E-05 112485 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 55.526 52.064 33732000 0 33732000 0 0 0 0 0 0 0 0 0 0 0 0 0 6288 3107 5730 53213;53214 42036;42037;42038;42039 42036 4 CSTPEEIK Unmodified 962.4379 0.43789681 1822 P60981 DSTN Destrin yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 20.279 16.13 2 0.02739 23328 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 116.9 83.546 107910000 30706000 77206000 0 0 0 0 0 0 0 0 0 0 0 0 0 6289 1822 5731 53215;53216 42040 42040 0 CSTPEEIKK Unmodified 1090.5329 0.53285983 1822 P60981 DSTN Destrin yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 14.108 10.717 2 0.00034429 14306 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 152.63 85.595 114170000 0 114170000 0 0 0 0 0 0 0 0 0 0 0 0 0 6290 1822 5732 53217;53218 42041;42042 42041 1 CSTPLLHQQYTSR Unmodified 1589.762 0.76202492 4517 Q9HCK8 CHD8 Chromodomain-helicase-DNA-binding protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 38.638 38.96 3 0.01152 43230 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 38.511 31.103 17270000 0 0 0 0 0 0 0 0 0 5352300 6220200 0 5697900 0 0 6291 4517 5733 53219;53220;53221 42043;42044 42044 2 CSVLPLSQNQEFMPFVK Unmodified 2022.9907 0.99070423 1440 P41250 GARS Glycine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 96.455 89.979 2 7.0917E-09 113580 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 137.95 120.15 32719000 11757000 20962000 0 0 0 0 0 0 0 0 0 0 0 0 0 6292 1440 5734 53222;53223 42045;42046 42045 2 CSVLPLSQNQEFMPFVK Oxidation (M) 2038.9856 0.98561885 1440 P41250 GARS Glycine--tRNA ligase yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS 8 3.46 1 3 1 1 1 1 86.274 86.407 2 0.00037636 100329 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.019 50.321 11031000 0 0 0 0 0 0 0 0 0 0 0 4006800 0 1145400 5879000 6293 1440 5734 53224;53225;53226;53227 42047;42048;42049 42049 2265 3 CSVPVDQASESLLK Unmodified 1531.7552 0.75520821 4674 Q9NVN8 GNL3L Guanine nucleotide-binding protein-like 3-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 67.144 67.352 2 0.0041096 77288 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 40.715 14.672 9397400 0 0 0 0 0 0 0 2567000 0 0 3844600 0 2985800 0 0 6294 4674 5735 53228;53229;53230 42050 42050 1 CSVSLSNVEAR Unmodified 1220.5819 0.58193529 1522 P47712 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.076 45.248 2 5.7562E-05 50620 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 114.4 97.305 165470000 0 0 0 8793300 8562100 14355000 10159000 10223000 8998500 14582000 17530000 29418000 13746000 12149000 16951000 6295 1522 5736 53231;53232;53233;53234;53235;53236;53237;53238;53239;53240;53241;53242 42051;42052;42053;42054;42055;42056;42057;42058;42059;42060;42061;42062;42063;42064;42065;42066;42067;42068;42069 42057 19 CSVSSLGFNVH Unmodified 1205.5499 0.54990688 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 69.26 63.255 2 0.0015723 83701 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.639 72.489 44951000 38648000 0 6302400 0 0 0 0 0 0 0 0 0 0 0 0 6296 3676 5737 53243;53244;53245 42070;42071;42072 42071 3 CSVTLLNETDILSQYLEK Unmodified 2125.0613 0.061286213 583 O94776 MTA2 Metastasis-associated protein MTA2 yes yes 0 0 0 By MS/MS 2 0 1 1 98.879 94.145 2 6.2278E-05 116479 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.297 72.376 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6297 583 5738 53246 42073 42073 1 CSWLVVQCLQR Unmodified 1447.7064 0.7064243 997 P14324 FDPS Farnesyl pyrophosphate synthase yes yes 0 0 0 By MS/MS 10 0 1 1 80.905 81.121 2 0.001288 93496 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.308 76.088 7698000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7698000 6298 997 5739 53247 42074 42074 1 CTELNQAWSSLGK Unmodified 1492.698 0.69802768 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.25 3.34 2 1 1 1 2 1 75.709 71.512 2 0.0018173 81179 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 94.297 79.623 110960000 0 110960000 0 0 0 0 0 0 0 0 0 0 0 0 0 6299 2344 5740 53248;53249;53250;53251 42075;42076;42077;42078 42078 4 CTESEEEEVTK Unmodified 1339.5449 0.54494066 1741 P54578 USP14 Ubiquitin carboxyl-terminal hydrolase 14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 15.325 14.649 2 1.7731E-11 13898 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 156.83 148.89 151080000 17319000 11756000 0 0 0 16721000 7913900 11299000 0 12670000 22985000 0 0 19729000 30692000 6300 1741 5741 53252;53253;53254;53255;53256;53257;53258;53259;53260;53261;53262;53263;53264 42079;42080;42081;42082;42083;42084;42085;42086;42087;42088;42089;42090;42091;42092;42093 42084 14 CTGGEVGATSALAPK Unmodified 1417.6871 0.68712864 1266 P30050 RPL12 60S ribosomal protein L12 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.256 41.435 2 5.5973E-27 46204 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 132.5 126.86 243630000 0 0 0 15234000 16201000 9742700 11623000 13789000 9408100 20053000 29362000 31846000 32254000 23707000 30413000 6301 1266 5742 53265;53266;53267;53268;53269;53270;53271;53272;53273;53274;53275;53276 42094;42095;42096;42097;42098;42099;42100;42101;42102;42103;42104 42101 11 CTHLIVPEPK Unmodified 1192.6274 0.62742892 3021 Q6ZW49 PAXIP1 PAX-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 52.875 46.936 3 0.0039957 57729 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 60.518 44.889 41976000 23571000 7498100 10907000 0 0 0 0 0 0 0 0 0 0 0 0 6302 3021 5743 53277;53278;53279 42105;42106;42107;42108 42108 4 CTLAARVDSFHESTEGK Unmodified 1906.8843 0.8843249 3579 Q8WWY3 PRPF31 U4/U6 small nuclear ribonucleoprotein Prp31 yes yes 0 0 1 By MS/MS 2 0 1 1 55.461 47.352 3 0.00015262 64915 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.646 62.644 8173100 8173100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6303 3579 5744 53280 42109 42109 1 CTLDQAFR Unmodified 1009.4651 0.46511462 3839 Q96FV9 THOC1 THO complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 43.922 44.297 2 0.02668 49682 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 90.777 58.306 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6304 3839 5745 53281;53282;53283;53284 42110;42111;42112;42113 42112 4 CTNSEVTVQPSPYLSYR Unmodified 1999.9309 0.93094074 541 O75794 CDC123 Cell division cycle protein 123 homolog yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS 10 0 6 1 1 1 1 2 69.535 69.799 2;3 2.4039E-06 79600 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.466 50.167 22263000 0 0 0 0 0 2588000 0 0 0 0 0 3210200 2910900 2884400 10670000 6305 541 5746 53285;53286;53287;53288;53289;53290 42114;42115;42116;42117 42115 3 CTPSVISFGSK Unmodified 1181.5751 0.575059 3633 Q92598 HSPH1 Heat shock protein 105 kDa yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 59.166 59.534 2 0.02532 67449 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 40.715 22.729 42580000 0 0 0 0 0 0 0 0 0 2731600 9576400 8314700 0 6873700 15083000 6306 3633 5747 53291;53292;53293;53294;53295 42118 42118 1 CTQDLGNSTK Unmodified 1122.4975 0.49753696 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching 7.33 3.77 2 4 1 1 1 1 1 1 8.4015 7.339 2 0.016408 8428 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.334 57.746 38735000 15295000 15759000 0 0 0 2657200 0 0 1426000 1444400 0 0 0 0 2152800 6307 5187 5748 53296;53297;53298;53299;53300;53301 42119;42120;42121 42119 3 CTSAEEFVQR Unmodified 1225.5397 0.53973612 384 O60231 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 37.276 37.742 2 0.00058483 41538 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 130.56 122.62 7583800 0 0 0 0 0 0 0 0 0 0 7583800 0 0 0 0 6308 384 5749 53302;53303;53304;53305;53306;53307;53308;53309 42122;42123;42124;42125;42126;42127;42128;42129 42124 8 CTTDHISAAGPWLK Unmodified 1555.7453 0.74531222 4061 Q99798 ACO2 Aconitate hydratase, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 71.794 63.555 3 0.01309 84371 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 38.977 30.381 35822000 35822000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6309 4061 5750 53310 42130 42130 1 CTTLTHHK Unmodified 996.4811 0.48109903 514 O75530 EED Polycomb protein EED yes yes 0 0 0 By MS/MS 2 0 1 1 2.008 -1.2866 2 0.020925 1925 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.212 54.6 4082400 4082400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6310 514 5751 53311 42131 42131 1 CTVFHGAQVEDAFR Unmodified 1635.7464 0.74637486 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.352 62.449 3 6.2125E-12 70512 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 79.614 75.554 138360000 0 0 0 2870200 2228200 19014000 3292200 6260000 4982100 13195000 7879900 15918000 7581400 15021000 40118000 6311 1565 5752 53312;53313;53314;53315;53316;53317;53318;53319;53320;53321;53322;53323 42132;42133;42134;42135;42136;42137;42138;42139;42140;42141;42142;42143 42139 12 CTVIAAANPIGGR Unmodified 1298.6765 0.67650438 1590 P49736 MCM2 DNA replication licensing factor MCM2 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 56.028 56.229 2 5.3965E-13 62984 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 135.79 116.7 58974000 0 0 0 0 2415700 4422400 3427500 2919600 0 6778800 7946100 7717800 3778500 7411100 12156000 6312 1590 5753 53324;53325;53326;53327;53328;53329;53330;53331;53332;53333;53334 42144;42145;42146;42147;42148;42149;42150;42151;42152 42148 9 CTYAVGNHDFIEAYK Unmodified 1786.7985 0.79847001 2743 Q5JVF3 PCID2 PCI domain-containing protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 68.255 64.532 3 0.02488 79856 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 24.084 18.541 2978700 0 0 2978700 0 0 0 0 0 0 0 0 0 0 0 0 6313 2743 5754 53335 42153 42153 1 CVAALAR Unmodified 759.40614 0.40614318 120 O00154;Q6ZUV0 ACOT7;ACOT7L Cytosolic acyl coenzyme A thioester hydrolase;Putative cytosolic acyl coenzyme A thioester hydrolase-like yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 23.518 23.68 2 0.023439 25384 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 85.061 56.195 352230000 0 0 0 51972000 44709000 0 0 0 0 23434000 67486000 164630000 0 0 0 6314 120 5755 53336;53337;53338;53339;53340 42154;42155;42156 42156 3 CVCRCEDLEK Unmodified 1367.5632 0.56319046 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 1 By MS/MS 2 0 1 1 18.87 16.271 3 0.030688 20515 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 42.802 35.755 5041100 0 0 5041100 0 0 0 0 0 0 0 0 0 0 0 0 6315 965 5756 53341 42157 42157 1 CVDFQTLK Unmodified 1009.4903 0.49026674 1333 P33992 MCM5 DNA replication licensing factor MCM5 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 55.436 50.089 2 0.034085 64984 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.89 89.257 224250000 0 224250000 0 0 0 0 0 0 0 0 0 0 0 0 0 6316 1333 5757 53342;53343 42158 42158 0 CVEALLAR Unmodified 930.49569 0.49568646 191 O14593 RFXANK DNA-binding protein RFXANK yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 52.393 52.534 2 0.0096192 58599 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 82.305 42.202 32698000 0 0 0 2899600 0 0 0 0 3912400 3653800 0 9618800 6807500 5806200 0 6317 191 5758 53344;53345;53346;53347;53348;53349 42159;42160;42161;42162 42160 4 CVEDPETGLR Unmodified 1174.5288 0.52883709 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 34.411 34.522 2 0.0019244 36834 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.639 77.653 53118000 0 0 0 6381100 5019200 0 6002400 7340600 3455700 7019300 0 0 6769900 5531900 5598200 6318 2501 5759 53350;53351;53352;53353;53354;53355;53356;53357;53358 42163;42164;42165;42166;42167;42168;42169 42165 7 CVFALREENK Unmodified 1264.6234 0.62340617 2231 Q13085 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes yes 0 0 1 By MS/MS 2 0 1 1 52.02 44.058 2 0.020281 60591 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.331 73.012 7726900 7726900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6319 2231 5760 53359 42170 42170 1 CVFEMPNENDK Unmodified 1381.5642 0.56423631 4794 Q9P0L0 VAPA Vesicle-associated membrane protein-associated protein A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 58.009 58.193 2 0.0036166 65855 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 77.192 58.752 46494000 0 0 0 0 5712400 0 4730200 0 0 5926200 0 12192000 4461500 5510600 7960600 6320 4794 5761 53360;53361;53362;53363;53364;53365;53366 42171;42172;42173;42174;42175;42176 42175 6 CVIALQEK Unmodified 959.511 0.51100218 1340 P35221 CTNNA1 Catenin alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 44.356 43.095 2 0.0053838 48571 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 127.12 92.225 851740000 13879000 366320000 4699200 30068000 27625000 40982000 33199000 25098000 35907000 46490000 53959000 46024000 38301000 33801000 55386000 6321 1340 5762 53367;53368;53369;53370;53371;53372;53373;53374;53375;53376;53377;53378;53379;53380;53381;53382 42177;42178;42179;42180;42181;42182;42183;42184;42185;42186;42187;42188;42189;42190;42191;42192;42193 42181 16 CVISEHMQVEEK Unmodified 1487.6748 0.6748494 400 O60443 DFNA5 Non-syndromic hearing impairment protein 5 yes yes 0 0 0 By MS/MS 2 0 1 1 44.831 41.016 3 0.032203 51726 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 35.077 22.809 11478000 0 0 11478000 0 0 0 0 0 0 0 0 0 0 0 0 6322 400 5763 53383 42194 42194 1 CVLLSNLSSTSHVPEVDPGSAELQK Unmodified 2666.3221 0.32214536 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.732 79.836 3 1.5773E-18 92213 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 72.916 59.324 118060000 0 0 0 0 4203200 10409000 1480300 6450000 4752800 14598000 14256000 18743000 5031800 14547000 23592000 6323 1565 5764 53384;53385;53386;53387;53388;53389;53390;53391;53392;53393;53394 42195;42196;42197;42198;42199;42200;42201;42202;42203;42204;42205;42206 42195 11 CVLNEGMPIYR Unmodified 1350.6424 0.64242706 1303 P31689 DNAJA1 DnaJ homolog subfamily A member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 69.247 69.489 2 2.0583E-05 79723 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 123.92 105.14 85529000 0 0 0 0 0 0 3223400 0 0 9319600 11307000 16608000 10571000 10217000 24283000 6324 1303 5765 53395;53396;53397;53398;53399;53400;53401 42207;42208;42209;42210;42211;42212;42213 42210 5 CVLPEEDSGELAK Unmodified 1445.6708 0.67080988 5167 Q9Y3F4 STRAP Serine-threonine kinase receptor-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 2 2 1 1 1 1 1 1 1 1 1 53.229 52.507 2 8.2302E-07 59409 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 94.297 74.982 580150000 0 383350000 0 0 0 7690600 6909400 0 6515500 12682000 32733000 34715000 17341000 23599000 54609000 6325 5167 5766 53402;53403;53404;53405;53406;53407;53408;53409;53410;53411;53412;53413;53414 42214;42215;42216;42217;42218;42219;42220;42221;42222;42223;42224;42225;42226 42223 13 CVLSGPPQLEK Unmodified 1226.6329 0.63290823 4086 Q9BQ52 ELAC2 Zinc phosphodiesterase ELAC protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 62.877 56.983 2 0.0004657 73025 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.97 83.435 86961000 0 86961000 0 0 0 0 0 0 0 0 0 0 0 0 0 6326 4086 5767 53415 42227 42227 1 CVLVNLSK Unmodified 931.51609 0.51608756 3225 Q8IVD9 NUDCD3 NudC domain-containing protein 3 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 58.451 51.427 2 0.030627 66598 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.738 31.046 59038000 38181000 20857000 0 0 0 0 0 0 0 0 0 0 0 0 0 6327 3225 5768 53416;53417 42228 42228 1 CVLVWEGTAK Unmodified 1161.5852 0.58522975 323 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 64.939 64.851 2 0.0070449 75049 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 63.419 25.286 44735000 0 0 0 5599200 5186500 6339000 5858900 0 0 6263900 0 0 8916600 6571100 0 6328 323 5769 53418;53419;53420;53421;53422;53423;53424;53425 42229;42230;42231;42232;42233;42234;42235;42236 42235 8 CVNTTLQIK Unmodified 1075.5696 0.56957969 2055 Q01518 CAP1 Adenylyl cyclase-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.25 3.34 2 1 1 2 1 1 48.769 42.444 2 0.0056719 57999 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.9 72.54 465850000 13923000 451920000 0 0 0 0 0 0 0 0 0 0 0 0 0 6329 2055 5770 53426;53427;53428;53429 42237;42238;42239 42238 3 CVQYDEHVISPK Unmodified 1473.6922 0.69221402 4961 Q9UKD1 GMEB2 Glucocorticoid modulatory element-binding protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 46.817 41.369 3 0.031199 53767 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 35.523 22.322 9855400 0 9855400 0 0 0 0 0 0 0 0 0 0 0 0 0 6330 4961 5771 53430 42240 42240 1 CVSPIPVSPTSR Unmodified 1298.6653 0.66527099 3134 Q86TC9 MYPN Myopalladin yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 54.548 54.878 2 0.0064992 62280 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 51.268 36.007 13954000 0 0 0 0 0 0 0 0 0 0 6979400 0 6974500 0 0 6331 3134 5772 53431;53432 42241;42242;42243 42241 3 CVSTLLDLIQTK Unmodified 1389.7538 0.75375164 2178;1937 P63010;Q10567 AP2B1;AP1B1 AP-2 complex subunit beta;AP-1 complex subunit beta-1 no no 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 90.136 90.263 2 0.0053412 104516 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.608 36.296 3617900 0 0 0 0 0 0 0 0 0 1322900 0 0 0 0 2295000 6332 1937;2178 5773 53433;53434 42244 42244 1 CVTSELLK Unmodified 948.49502 0.49501776 546 O75821 EIF3G Eukaryotic translation initiation factor 3 subunit G yes yes 0 0 0 By MS/MS 10 0 1 1 47.07 47.802 2 0.012605 52910 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.255 36.095 74159000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 74159000 6333 546 5774 53435 42245 42245 1 CVVALATDPNILSLSGK Unmodified 1756.9393 0.93932058 3920 Q96LJ7 DHRS1 Dehydrogenase/reductase SDR family member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 87.205 87.261 2 0.0001815 101353 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 82.543 69.967 17380000 0 0 0 0 1929500 1978000 0 0 0 4217000 4174200 0 2156500 2924800 0 6334 3920 5775 53436;53437;53438;53439;53440;53441;53442 42246;42247;42248;42249;42250;42251;42252 42251 7 CVVEMEGNQTVLHPPPSNTK Unmodified 2236.0616 0.061637339 4350 Q9H1H9 KIF13A Kinesin-like protein KIF13A yes yes 0 0 0 By MS/MS 3 0 1 1 64.366 59.619 3 0.013651 73050 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 27.324 22.232 2163800 0 2163800 0 0 0 0 0 0 0 0 0 0 0 0 0 6335 4350 5776 53443 42253 42253 1 CVVILPDSVR Unmodified 1156.6274 0.62742892 910 P0DN79;P35520 CBS Cystathionine beta-synthase yes no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 70.792 70.908 2 0.0042126 81422 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.665 53.04 39428000 0 0 0 2570500 0 4137500 1802500 1808800 0 3566900 4360200 4778700 2290200 5608100 8504700 6336 910 5777 53444;53445;53446;53447;53448;53449;53450;53451;53452;53453 42254;42255;42256;42257;42258;42259 42258 5 CVVSEAGK Unmodified 848.4062 0.40620276 275 O15355 PPM1G Protein phosphatase 1G yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.684 12.84 2 0.009506 10953 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.671 38.06 133480000 0 0 0 6166000 6719100 14112000 10797000 6977300 8283200 10017000 12123000 15207000 13358000 13462000 16263000 6337 275 5778 53454;53455;53456;53457;53458;53459;53460;53461;53462;53463;53464;53465 42260;42261;42262;42263;42264;42265;42266 42262 7 CVVVGDGAVGK Unmodified 1059.5383 0.53827956 1821;1936;2014 P60953;P17081;Q9H4E5;P84095;P63000;P60763;P15153 CDC42;RHOQ;RHOJ;RHOG;RAC1;RAC3;RAC2 Cell division control protein 42 homolog;Rho-related GTP-binding protein RhoQ;Rho-related GTP-binding protein RhoJ;Rho-related GTP-binding protein RhoG;Ras-related C3 botulinum toxin substrate 1;Ras-related C3 botulinum toxin substrate 3;Ras-related C3 botulinum toxin substrate 2 no no 0 0 0 By MS/MS By MS/MS By MS/MS 4.25 3.34 2 1 1 1 2 1 35.251 31.453 2 0.00032067 40546 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.98 74.17 690430000 18541000 657270000 0 0 0 0 0 0 0 0 0 14610000 0 0 0 6338 1821;2014;1936 5779 53466;53467;53468;53469 42267;42268;42269;42270;42271;42272 42268 6 CVWSPLASPSTSILK Unmodified 1644.8545 0.85452832 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 0 By MS/MS 10 0 1 1 85.52 85.688 2 0.0064034 99013 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.942 56.262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6339 2804 5780 53470 42273 42273 1 CVYTIPAHQNLVTGVK Unmodified 1798.94 0.93998929 303 O43172 PRPF4 U4/U6 small nuclear ribonucleoprotein Prp4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 66.089 66.044 3 0.04307 75626 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 27.263 12.472 10746000 0 0 0 0 2311400 0 0 2507300 0 0 0 0 0 5927200 0 6340 303 5781 53471;53472;53473 42274;42275 42274 2 CWEVQDSGQTIPK Unmodified 1546.7086 0.70859237 1981 P78406 RAE1 mRNA export factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.559 56.638 2 7.409E-09 64151 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 111.06 103.13 146860000 0 0 0 9315200 10462000 7462300 12911000 12781000 11051000 9722900 17601000 16362000 19138000 20051000 0 6341 1981 5782 53474;53475;53476;53477;53478;53479;53480;53481;53482;53483;53484;53485 42276;42277;42278;42279;42280;42281;42282;42283;42284;42285;42286;42287;42288;42289 42278 14 CYAPSAIPTPQR Unmodified 1359.6605 0.66051996 3198 Q86XN7 PROSER1 Proline and serine-rich protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 52.294 52.39 2 0.0020713 58286 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 79.986 67.779 104770000 0 0 0 6183200 6795200 10986000 9700900 8947300 9862400 10563000 8784800 11167000 12372000 9408200 0 6342 3198 5783 53486;53487;53488;53489;53490;53491;53492;53493;53494;53495;53496 42290;42291;42292;42293;42294;42295 42293 5 CYAYIETSSNSADIDK Unmodified 1835.7884 0.78835883 297 O43149 ZZEF1 Zinc finger ZZ-type and EF-hand domain-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 58.021 52.19 2 0.00040095 67341 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.856 79.267 9782600 0 9782600 0 0 0 0 0 0 0 0 0 0 0 0 0 6343 297 5784 53497 42296 42296 1 CYDLIPTSSK Unmodified 1182.5591 0.55907458 1742 P54619 PRKAG1 5'-AMP-activated protein kinase subunit gamma-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 56.358 56.211 2 0.030285 64586 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 43.083 21.635 12923000 0 0 0 2123500 2999300 0 0 0 0 0 5461700 0 0 2338000 0 6344 1742 5785 53498;53499;53500;53501 42297 42297 1 CYEMASHLR Unmodified 1165.5008 0.5008482 846 P07737;CON__P02584 PFN1 Profilin-1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 2 14 1 1 1 1 1 1 1 1 2 1 1 2 2 31.89 31.498 2;3 0.0032516 33809 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 73.985 67.097 219310000 46774000 0 6573300 2292400 1608900 3138900 0 2004600 2073200 4876900 30884000 22470000 5224900 22449000 68938000 6345 846 5786 53502;53503;53504;53505;53506;53507;53508;53509;53510;53511;53512;53513;53514;53515;53516;53517 42298;42299;42300;42301;42302;42303 42300 4 CYEMASHLRR Unmodified 1321.602 0.60195923 846 P07737;CON__P02584 PFN1 Profilin-1 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 26.037 26.328 3 0.0057059 26390 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.001 28.601 136000000 0 0 0 1998900 0 5140900 0 1467300 0 2884000 15963000 21844000 3036800 11185000 72481000 6346 846 5787 53518;53519;53520;53521;53522;53523;53524;53525;53526 42304;42305;42306 42304 3 CYIASAGADALAK Unmodified 1309.6336 0.63363651 371 O43815 STRN Striatin yes yes 0 0 0 By MS/MS By matching By matching By matching By matching 10 0 5 1 1 1 1 1 53.093 53.037 2 0.027418 61283 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 35.652 30.17 17685000 0 0 0 3258700 1933200 0 0 0 0 0 3329800 0 4324500 4838900 0 6347 371 5788 53527;53528;53529;53530;53531 42307 42307 1 CYLFGGLANDSEDPK Unmodified 1684.7403 0.74028642 1663 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 76.64 76.114 2 0.0001671 87905 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 70.488 63.829 84252000 0 31216000 0 2248800 3431800 2447700 2530400 4264900 3669200 3473100 3803900 8902100 4454000 6814100 6996300 6348 1663 5789 53532;53533;53534;53535;53536;53537;53538;53539;53540;53541;53542;53543;53544;53545 42308;42309;42310;42311;42312;42313;42314;42315;42316;42317 42316 10 CYLGATCAYDAAK Unmodified 1462.6221 0.62208554 3518 Q8TEQ6 GEMIN5 Gem-associated protein 5 yes yes 0 0 0 By MS/MS 2 0 1 1 54.565 48.76 2 0.0032142 62947 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.781 62.569 16691000 0 16691000 0 0 0 0 0 0 0 0 0 0 0 0 0 6349 3518 5790 53546 42318 42318 1 CYPDRVDYVDK Unmodified 1428.6344 0.63436479 3961 Q96QK1 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.22 2.2 1 8 1 1 1 1 1 1 1 1 1 37.732 37.472 3 0.019267 45742 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 49.5 40.496 58234000 0 10959000 0 2667300 0 0 0 0 1664700 4528600 7466400 8563900 5387900 4504600 12492000 6350 3961 5791 53547;53548;53549;53550;53551;53552;53553;53554;53555 42319;42320 42319 2 CYQSEFGRDLEK Unmodified 1530.6773 0.67729224 1100 P20073 ANXA7 Annexin A7 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 43.837 43.932 3 0.00074914 48220 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.233 50.907 51109000 0 0 0 1533700 0 12903000 7868800 0 0 8661700 0 0 0 0 20142000 6351 1100 5792 53556;53557;53558;53559;53560 42321;42322;42323;42324 42323 4 CYSCGEFGHIQK Unmodified 1484.6177 0.61766887 1903 P62633 CNBP Cellular nucleic acid-binding protein yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 43.234 37.968 3 0.00069865 51963 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.31 75.421 34258000 28435000 0 5823400 0 0 0 0 0 0 0 0 0 0 0 0 6352 1903 5793 53561;53562 42325;42326;42327 42326 3 CYVQPQWVFDSVNAR Unmodified 1867.8676 0.86755262 167 O00541 PES1 Pescadillo homolog yes yes 0 0 0 By MS/MS By MS/MS 10 0 3 1 2 84.391 84.58 2;3 0.00035774 97727 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.721 50.975 11829000 0 0 0 0 0 0 0 0 0 0 3650200 0 0 0 8179300 6353 167 5794 53563;53564;53565 42328;42329 42329 2 CYYFDYK Unmodified 1057.4215 0.42151847 1544 P48556 PSMD8 26S proteasome non-ATPase regulatory subunit 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 56.261 56.309 2 0.035265 63778 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 70.912 48.781 40659000 0 0 0 2992800 4276700 5187700 0 3013300 0 7705100 6476600 7815700 0 3191000 0 6354 1544 5795 53566;53567;53568;53569;53570;53571;53572;53573 42330 42330 1 DAAAAKEEAPKAEPEK Unmodified 1653.821 0.82097959 1993 P80723 BASP1 Brain acid soluble protein 1 yes yes 0 0 2 By MS/MS By MS/MS By matching By matching 10 0 4 1 1 1 1 14.611 14.836 3 0.025725 14158 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 41.86 28.447 13394000 0 0 0 0 0 0 2083000 0 0 0 0 5442700 2983800 2884400 0 6355 1993 5796 53574;53575;53576;53577 42331 42331 1 DAAAALAAMNGRK Unmodified 1258.6452 0.64520425 2048 Q01085 TIAL1 Nucleolysin TIAR yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 47.865 48.113 2 0.00075746 54125 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 85.733 62.993 19364000 0 0 0 0 0 2320200 2257200 0 0 4986000 0 0 0 4339800 5460400 6356 2048 5797 53578;53579;53580;53581;53582 42332;42333;42334 42332 3 DAAAHLQTSHK Unmodified 1177.584 0.5839842 3832 Q96F24 NRBF2 Nuclear receptor-binding factor 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 9.3923 6.1334 2;3 0.00032509 10361 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.965 67.279 47634000 39202000 0 8432400 0 0 0 0 0 0 0 0 0 0 0 0 6357 3832 5798 53583;53584;53585 42335;42336;42337 42336 3 DAAAHLQTSHKPSAEDAEGQSPLSQK Unmodified 2702.2896 0.28959968 3832 Q96F24 NRBF2 Nuclear receptor-binding factor 2 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By matching 6.8 3.92 2 3 1 1 1 1 1 39.501 37.707 4 1.5015E-37 51391 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.035 64.675 51301000 16184000 0 16607000 0 0 0 0 0 0 0 5717000 0 0 4195000 8598200 6358 3832 5799 53586;53587;53588;53589;53590 42338;42339;42340 42339 3 DAAASASTPAQAPTSDSPVAEDASR Unmodified 2372.0728 0.07279019 1772 P55789 GFER FAD-linked sulfhydryl oxidase ALR yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching 10 0 5 1 1 1 1 1 46.934 46.822 3 4.3527E-05 53424 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 37.56 28.851 18485000 0 0 0 3279700 2816000 2698400 2963900 0 0 0 6727100 0 0 0 0 6359 1772 5800 53591;53592;53593;53594;53595 42341;42342;42343 42342 3 DAAAVGNHVAK Unmodified 1051.5411 0.54105675 2318 Q13564 NAE1 NEDD8-activating enzyme E1 regulatory subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.57 3.85 3 1 3 1 2 1 1 1 1 12.499 10.758 2 0.00112 9356 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.941 56.806 606930000 32230000 543140000 14177000 0 0 0 0 0 0 0 0 3541500 1398500 0 12445000 6360 2318 5801 53596;53597;53598;53599;53600;53601;53602 42344;42345;42346;42347;42348;42349 42345 5 DAAAVLVSR Unmodified 900.50288 0.50288033 4152 Q9BTW9 TBCD Tubulin-specific chaperone D yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 41.95 42.552 2 0.032555 47846 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 68.016 35.406 14006000 0 0 0 0 0 0 0 0 0 0 5736600 0 0 0 8269000 6361 4152 5802 53603;53604;53605 42350;42351 42350 2 DAAEAIKK Unmodified 844.46543 0.46543219 552 O75874 IDH1 Isocitrate dehydrogenase [NADP] cytoplasmic yes yes 0 0 1 By MS/MS 3 0 1 1 9.6572 6.2948 2 0.018422 8331 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 123.69 56.697 56620000 0 56620000 0 0 0 0 0 0 0 0 0 0 0 0 0 6362 552 5803 53606 42352 42352 0 DAAFEALGTALK Unmodified 1205.6292 0.62920306 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.143 80.202 2 2.4911E-05 92292 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 93.096 61.161 366840000 0 0 0 15535000 18927000 31197000 21216000 28578000 19410000 42289000 33999000 46294000 32845000 26877000 49673000 6363 2361 5804 53607;53608;53609;53610;53611;53612;53613;53614;53615;53616;53617;53618 42353;42354;42355;42356;42357;42358;42359;42360;42361;42362;42363;42364;42365;42366 42358 14 DAAGLECKPRPLHK Unmodified 1590.83 0.83004491 4230 Q9BXP5 SRRT Serrate RNA effector molecule homolog yes yes 0 0 2 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 22.978 23.141 3 0.036426 23007 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 34.101 21.936 54915000 0 0 0 2720300 1987100 1891300 5024500 4171800 1919100 0 6130900 0 7815800 9261000 13993000 6364 4230 5805 53619;53620;53621;53622;53623;53624;53625;53626;53627;53628 42367 42367 0 DAAHMLQANK Unmodified 1097.5288 0.52877751 491 O75391 SPAG7 Sperm-associated antigen 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.87 3 5 1 1 1 1 1 1 1 1 26.922 25.342 2 0.0013917 25919 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 106.91 90.578 88066000 8178200 47431000 2622200 0 0 0 0 0 0 0 7673200 7527700 0 4429600 10205000 6365 491 5806 53629;53630;53631;53632;53633;53634;53635;53636 42368;42369;42370;42371;42372;42373;42374;42375;42376 42370 8 DAAHMLQANK Oxidation (M) 1113.5237 0.52369213 491 O75391 SPAG7 Sperm-associated antigen 7 yes yes 0 1 0 By MS/MS By matching 2.33 0.471 2 1 2 1 14.452 11.415 2 0.0083484 15071 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.1 58.114 39716000 0 36329000 3387200 0 0 0 0 0 0 0 0 0 0 0 0 6366 491 5806 53637;53638;53639 42377;42378 42377 637 2 DAAIQTTPSCNSFDGK Unmodified 1710.7519 0.75191374 2708 Q53SF7 COBLL1 Cordon-bleu protein-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.549 46.716 2 1.3551E-20 52279 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 113.77 105.86 67698000 0 0 0 4087100 4522800 6116000 4379700 3672500 4350000 5069600 7327000 6246000 9065900 4912300 7949200 6367 2708 5807 53640;53641;53642;53643;53644;53645;53646;53647;53648;53649;53650;53651 42379;42380;42381;42382;42383;42384;42385;42386;42387;42388;42389;42390 42388 12 DAAIYLVTSLASK Unmodified 1350.7395 0.73948179 1754 P55060 CSE1L Exportin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 1 3 2 92.389 88.053 2 0.00061102 110350 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.22 100.2 454680000 93776000 320020000 40885000 0 0 0 0 0 0 0 0 0 0 0 0 6368 1754 5808 53652;53653;53654;53655;53656;53657 42391;42392;42393;42394;42395;42396;42397 42391 6 DAALATALGDK Unmodified 1044.5451 0.54513908 1111 P20700 LMNB1 Lamin-B1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 7.12 3.72 2 1 5 1 2 1 1 1 1 1 53.525 50.68 2 0.00064166 58960 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 78.556 52.662 257570000 3500300 230640000 0 6187600 3668700 8226000 5347300 0 0 0 0 0 0 0 0 6369 1111 5809 53658;53659;53660;53661;53662;53663;53664;53665 42398;42399;42400;42401;42402;42403 42403 4 DAALATALGDKK Unmodified 1172.6401 0.6401021 1111 P20700 LMNB1 Lamin-B1 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 45.593 40.515 2 0.016684 50922 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 76.228 39.037 29757000 0 29757000 0 0 0 0 0 0 0 0 0 0 0 0 0 6370 1111 5810 53666;53667 42404;42405 42405 2 DAALAVAEAMADK Unmodified 1274.6177 0.61765209 1495 P46060 RANGAP1 Ran GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 78.695 78.835 2 0.0023202 90837 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 59.198 44.532 21887000 0 0 0 0 0 0 11553000 0 0 0 0 0 0 10334000 0 6371 1495 5811 53668;53669 42406 42406 1 DAALAVAEAMADK Oxidation (M) 1290.6126 0.61256672 1495 P46060 RANGAP1 Ran GTPase-activating protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 52.182 52.414 2 0.0026653 59939 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 51.268 37.061 223420000 0 0 0 0 7957700 26428000 0 13123000 17595000 31436000 22965000 29269000 25824000 19191000 29630000 6372 1495 5811 53670;53671;53672;53673;53674;53675;53676;53677;53678;53679 42407 42407 2352 1 DAALFPGEELK Unmodified 1188.6027 0.60265396 2351 Q13887 KLF5 Krueppel-like factor 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 72.965 73.059 2 0.022845 84044 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 41.724 30.9 186140000 0 0 0 11714000 0 14567000 15510000 0 0 28421000 27406000 20190000 20678000 16893000 30766000 6373 2351 5812 53680;53681;53682;53683;53684;53685;53686;53687;53688 42408;42409;42410;42411;42412;42413 42409 6 DAANLLNDALAIR Unmodified 1368.7361 0.73612775 2143 Q07866 KLC1 Kinesin light chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 89.376 89.484 2 0.00032852 103573 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.525 69.478 38301000 0 0 0 0 1462800 2495700 1584300 2252300 1722200 7047900 5024600 2913600 1240300 2619500 9937700 6374 2143 5813 53689;53690;53691;53692;53693;53694;53695;53696;53697;53698;53699 42414;42415;42416;42417;42418;42419;42420;42421;42422;42423 42417 10 DAANLLNDALAIREK Unmodified 1625.8737 0.87368386 2143 Q07866 KLC1 Kinesin light chain 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 4 3.46 3 1 1 1 1 1 87.032 83.221 3 1.2179E-16 104593 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.54 112.01 49673000 6977600 30032000 1270900 0 0 0 0 0 0 0 0 0 0 0 11392000 6375 2143 5814 53700;53701;53702;53703 42424;42425;42426 42424 3 DAAPLPRPGAVLK Unmodified 1303.7612 0.76122028 527 O75638 CTAG2 Cancer/testis antigen 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.379 58.494 3 0.0048686 66559 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 45.915 36.704 450840000 0 0 0 24701000 29416000 34259000 33612000 40090000 24286000 39268000 40926000 46401000 38114000 34548000 65216000 6376 527 5815 53704;53705;53706;53707;53708;53709;53710;53711;53712;53713;53714;53715 42427;42428;42429;42430;42431;42432;42433;42434;42435;42436;42437 42434 10 DAAQQDAK Unmodified 845.38791 0.38791015 188 O14562 UBFD1 Ubiquitin domain-containing protein UBFD1 yes yes 0 0 0 By MS/MS 1 0 1 1 106.24 111.5 2 0.0033759 92141 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 119.41 54.603 49575000 49575000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6377 188 5816 53716 42438 42438 1 DAASCMTVHDK Unmodified 1233.5118 0.51180681 1594 P49754 VPS41 Vacuolar protein sorting-associated protein 41 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 18.86 15.377 3 0.011371 20151 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 41.242 38.571 12422000 0 12422000 0 0 0 0 0 0 0 0 0 0 0 0 0 6378 1594 5817 53717 42439 42439 1 DAASGEVVGK Unmodified 931.46108 0.4610751 1704 P52888 THOP1 Thimet oligopeptidase yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 13.782 14.255 2 0.0046058 12862 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.23 29.361 32802000 0 0 0 0 0 0 0 0 0 0 11435000 0 0 0 21367000 6379 1704 5818 53718;53719 42440;42441 42440 2 DAATDVASR Unmodified 904.42502 0.42502394 2150 Q08188 TGM3 Protein-glutamine gamma-glutamyltransferase E;Protein-glutamine gamma-glutamyltransferase E 50 kDa catalytic chain;Protein-glutamine gamma-glutamyltransferase E 27 kDa non-catalytic chain yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 13.11 13.401 2 0.02892 12488 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.794 24.839 31129000 0 0 0 0 0 0 6281500 0 0 0 6339300 18508000 0 0 0 6380 2150 5819 53720;53721;53722 42442 42442 1 DAATDVASRNDPK Unmodified 1358.6426 0.64262129 2150 Q08188 TGM3 Protein-glutamine gamma-glutamyltransferase E;Protein-glutamine gamma-glutamyltransferase E 50 kDa catalytic chain;Protein-glutamine gamma-glutamyltransferase E 27 kDa non-catalytic chain yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 17.596 17.663 3 0.0048014 17845 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 62.694 51.942 221670000 0 0 0 86699000 14801000 14790000 18244000 42329000 10891000 0 0 33919000 0 0 0 6381 2150 5820 53723;53724;53725;53726;53727;53728;53729 42443;42444;42445;42446 42446 2 DAATEREVSDLTR Unmodified 1461.7059 0.70594983 399 O60437 PPL Periplakin yes yes 0 0 1 By MS/MS By matching 10 0 2 1 1 41.642 41.137 3 0.016758 46582 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 36.944 27.894 11752000 0 0 0 9570200 2181500 0 0 0 0 0 0 0 0 0 0 6382 399 5821 53730;53731 42447 42447 0 DAATEREVSDLTRQYEDEAAK Unmodified 2396.1092 0.1091757 399 O60437 PPL Periplakin yes yes 0 0 2 By MS/MS 2 0 1 1 74.546 71.699 3 0.03053 87507 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 36.253 22.381 2258800 0 0 2258800 0 0 0 0 0 0 0 0 0 0 0 0 6383 399 5822 53732 42448 42448 1 DAATIMQPYFTSNGLVTK Oxidation (M) 1971.9612 0.96117824 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.901 77.958 2 3.1431E-97 89699 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 188.09 124.47 205990000 0 0 0 10618000 13364000 23254000 16384000 13391000 14930000 18317000 16212000 25856000 16215000 19850000 17602000 6384 2392 5823 53733;53734;53735;53736;53737;53738;53739;53740;53741;53742;53743;53744 42449;42450;42451;42452;42453;42454;42455;42456;42457;42458;42459 42452 3895 11 DAATIMQPYFTSNGLVTK Unmodified 1955.9663 0.96626362 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 85.623 85.746 2 5.4434E-62 98582 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 169.23 156.46 26864000 0 0 0 0 0 5211100 0 5103600 4749900 0 0 0 4281000 7518100 0 6385 2392 5823 53745;53746;53747;53748;53749;53750;53751 42460;42461;42462;42463;42464;42465;42466 42464 7 DAATVTQMHFLTGQGR Unmodified 1731.8363 0.8362525 2517 Q15334 LLGL1 Lethal(2) giant larvae protein homolog 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 69.4 69.334 3 0.03356 79033 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 26.89 4.6758 13152000 0 0 0 1631900 1610200 0 0 0 0 1753700 0 0 0 2298200 5858400 6386 2517 5824 53752;53753;53754;53755;53756 42467 42467 1 DAAYYSYQNR Unmodified 1249.5364 0.53636531 3662 Q92793 CREBBP CREB-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 33.898 34.136 2 0.0038902 36528 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 87.476 76.065 61074000 0 0 0 0 3071700 4273000 4211800 3134100 2915700 4545500 6049800 8264500 10532000 5189100 8887200 6387 3662 5825 53757;53758;53759;53760;53761;53762;53763;53764;53765;53766;53767 42468;42469;42470;42471;42472;42473;42474;42475 42472 8 DADADAGGGADGGDGRGGHSCR Unmodified 2029.7893 0.78925532 2423 Q14657 LAGE3 EKC/KEOPS complex subunit LAGE3 yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 6.1408 6.342 3 5.5957E-07 3557 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.383 26.426 1724700 0 0 0 0 0 0 0 0 0 0 0 677790 0 0 1046900 6388 2423 5826 53768;53769 42476 42476 1 DADAGDEDEESEEPR Unmodified 1662.6129 0.61289688 4782 Q9NZT2 OGFR Opioid growth factor receptor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.747 16.926 2 5.3681E-27 15990 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 132.76 132.76 44995000 0 0 0 1778400 2503100 2402900 3283000 2231600 1525100 2841300 4473600 7847300 5720000 3554000 6835000 6389 4782 5827 53770;53771;53772;53773;53774;53775;53776;53777;53778;53779;53780;53781 42477;42478;42479;42480;42481;42482;42483;42484;42485;42486;42487;42488 42482 12 DADERIEK Unmodified 974.46689 0.46688876 2391 Q14203 DCTN1 Dynactin subunit 1 yes yes 0 0 1 By MS/MS 3 0 1 1 8.5625 5.2041 2 0.043901 6976 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 116.05 57.236 51808000 0 51808000 0 0 0 0 0 0 0 0 0 0 0 0 0 6390 2391 5828 53782 42489 42489 1 DADISDVAFLVVGDPFGATTHSDLVLR Unmodified 2829.4185 0.41848859 4372 Q9H2P9 DPH5 Diphthine synthase yes yes 0 0 0 By MS/MS 2 0 1 1 100.57 92.436 3 3.0364E-12 119081 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.341 67.722 7299200 7299200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6391 4372 5829 53783 42490 42490 1 DADISDVAFLVVGDPFGATTHSDLVLRATK Unmodified 3129.5982 0.59824387 4372 Q9H2P9 DPH5 Diphthine synthase yes yes 0 0 1 By MS/MS 2.33 0.471 2 1 3 98.963 92.367 3;4 1.3514E-66 117524 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 115.66 113.4 69111000 69111000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6392 4372 5830 53784;53785;53786 42491;42492;42493 42492 2 DADLTDTAQTR Unmodified 1205.5524 0.5524093 2335 Q13630 TSTA3 GDP-L-fucose synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.88 4.04 1 2 5 2 1 1 1 1 1 1 25.307 22.166 2 0.004039 25020 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 83.883 59.928 10598000 4394700 4672600 0 0 0 0 1530600 0 0 0 0 0 0 0 0 6393 2335 5831 53787;53788;53789;53790;53791;53792;53793;53794 42494;42495;42496;42497;42498;42499;42500 42500 7 DADLTDTAQTRALFEK Unmodified 1793.8796 0.8795571 2335 Q13630 TSTA3 GDP-L-fucose synthase yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 72.384 67.933 3 1.2263E-07 82388 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 96.993 85.948 206580000 0 195240000 11341000 0 0 0 0 0 0 0 0 0 0 0 0 6394 2335 5832 53795;53796;53797 42501;42502;42503;42504 42502 4 DADLWSSHDK Unmodified 1172.5098 0.5098162 1335 P34896 SHMT1 Serine hydroxymethyltransferase, cytosolic yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 38.443 32.704 2 0.010634 43024 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.173 65.227 55211000 5892500 49318000 0 0 0 0 0 0 0 0 0 0 0 0 0 6395 1335 5833 53798;53799 42505 42505 1 DADMLTGDEQVWK Unmodified 1506.6661 0.66605885 4431 Q9H7B4 SMYD3 Histone-lysine N-methyltransferase SMYD3 yes yes 0 0 0 By MS/MS 2 0 1 1 76.598 71.76 2 0.0043461 89745 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.568 73.798 21957000 0 21957000 0 0 0 0 0 0 0 0 0 0 0 0 0 6396 4431 5834 53800 42506;42507 42507 2 DADPILISLR Unmodified 1111.6237 0.62372375 4104 Q9BR76 CORO1B Coronin-1B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 81.995 82.055 2 0.0027225 94497 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.755 60.978 87639000 0 0 0 2250600 2477600 3714200 4008200 3007700 2241000 5551200 10776000 9889200 0 7323400 36400000 6397 4104 5835 53801;53802;53803;53804;53805;53806;53807;53808;53809;53810;53811 42508;42509;42510;42511;42512;42513;42514;42515;42516;42517;42518 42511 11 DADSITLFDVQQK Unmodified 1478.7253 0.72528829 1721 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.006 79.064 2 2.3935E-26 91582 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 164.33 143.71 394030000 0 0 0 19641000 17165000 32770000 21946000 30424000 22037000 40477000 40961000 48119000 37515000 28759000 54217000 6398 1721 5836 53812;53813;53814;53815;53816;53817;53818;53819;53820;53821;53822;53823 42519;42520;42521;42522;42523;42524;42525;42526;42527;42528;42529 42524 11 DADSQNPDAPEGK Unmodified 1342.5637 0.56370227 1721 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.47 3.93 3 2 12 3 2 1 1 1 1 1 1 1 1 1 1 1 1 27.076 27.427 2 1.1533E-258 99198 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 279.62 229.91 457930000 113340000 60869000 0 12968000 12610000 24180000 23945000 18502000 14767000 23920000 30955000 31618000 29095000 24014000 37148000 6399 1721 5837 53824;53825;53826;53827;53828;53829;53830;53831;53832;53833;53834;53835;53836;53837;53838;53839;53840 42530;42531;42532;42533;42534;42535;42536;42537;42538;42539;42540;42541;42542;42543;42544;42545;42546 42541 17 DADSQNPDAPEGKR Unmodified 1498.6648 0.6648133 1721 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 8.0091 8.136 3 0.00018817 6699 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 66.285 58.316 62671000 0 0 0 3117700 2086000 1938300 3191200 1877900 3735500 4694800 12553000 12499000 8981200 3250500 4745200 6400 1721 5838 53841;53842;53843;53844;53845;53846;53847;53848;53849;53850;53851;53852 42547;42548;42549;42550;42551;42552;42553;42554 42553 8 DADSTEHSTPSLVHDFRPSSNK Unmodified 2426.1098 0.1098444 4350 Q9H1H9 KIF13A Kinesin-like protein KIF13A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 50.967 48.561 4 8.3078E-20 67530 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.17 96.9 42182000 28611000 0 0 0 0 0 0 0 0 0 0 0 0 4919700 8651100 6401 4350 5839 53853;53854;53855 42555;42556;42557 42556 3 DADVEDEDTEEAK Unmodified 1464.574 0.57399218 393 O60306 AQR Intron-binding protein aquarius yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.31 2.4 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 24.717 25.296 2 0.00096611 18185 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 79.693 74.152 80316000 14914000 0 0 4085800 4004900 5138000 3726300 4816100 4412600 4877400 5725200 7300600 4843200 6559300 9913200 6402 393 5840 53856;53857;53858;53859;53860;53861;53862;53863;53864;53865;53866;53867;53868 42558;42559;42560;42561;42562;42563;42564;42565;42566;42567;42568;42569;42570 42567 13 DADVQNFVSFISK Unmodified 1468.7198 0.71980898 1445 P42126 ECI1 Enoyl-CoA delta isomerase 1, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 89.384 89.528 2 0.0052369 103850 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.3 43.52 11291000 0 0 0 0 0 0 0 0 0 0 1462900 1502700 0 1230600 7094900 6403 1445 5841 53869;53870;53871;53872 42571;42572;42573;42574 42571 3 DAEAAEATAEGALK Unmodified 1345.6361 0.63613893 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 50.298 50.668 2 0.00039575 57085 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 88.187 64.337 39110000 0 0 0 0 0 0 0 0 0 0 21734000 0 17375000 0 0 6404 5262 5842 53873;53874;53875;53876;53877;53878;53879 42575;42576;42577;42578;42579;42580;42581 42579 7 DAEAEGLSGTTLLPK Unmodified 1500.7672 0.7671531 4918 Q9UI14 RABAC1 Prenylated Rab acceptor protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 76.986 72.148 2 1.623E-06 90095 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.46 59.037 48619000 0 48619000 0 0 0 0 0 0 0 0 0 0 0 0 0 6405 4918 5843 53880 42582 42582 1 DAEALAAAQQHFNAVSAGLSSNEDGAEATLAGQMMACK Unmodified 3834.7247 0.72473608 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 91.105 88.632 4 0.0094673 107308 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 19.896 18.313 2185900 0 0 2185900 0 0 0 0 0 0 0 0 0 0 0 0 6406 643 5844 53881 42583 42583 1 DAEAWFNEK Unmodified 1108.4825 0.48253882 72;101 CON__P13645;P13645;CON__Q148H6;CON__Q7Z3Y7;Q7Z3Y7;CON__Q7Z3Z0;CON__Q7Z3Y8;Q7Z3Z0;Q7Z3Y8 KRT10;KRT28;KRT25;KRT27 Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 28;Keratin, type I cytoskeletal 25;Keratin, type I cytoskeletal 27 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.94 2.68 6 1 45 2 3 2 6 3 3 4 4 3 3 3 6 5 3 2 61.694 61.228 1;2 2.0716E-65 67135 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 220.1 172.25 + 53507000000 64475000 2168700000 18877000 9320900000 2295100000 3236900000 2774700000 4883300000 2313400000 4254300000 3830200000 9546600000 4823500000 2325700000 1650500000 6407 72;101 5845 53882;53883;53884;53885;53886;53887;53888;53889;53890;53891;53892;53893;53894;53895;53896;53897;53898;53899;53900;53901;53902;53903;53904;53905;53906;53907;53908;53909;53910;53911;53912;53913;53914;53915;53916;53917;53918;53919;53920;53921;53922;53923;53924;53925;53926;53927;53928;53929;53930;53931;53932;53933 42584;42585;42586;42587;42588;42589;42590;42591;42592;42593;42594;42595;42596;42597;42598;42599;42600;42601;42602;42603;42604;42605;42606;42607;42608;42609;42610;42611;42612;42613;42614;42615;42616;42617;42618;42619;42620;42621;42622;42623;42624;42625;42626;42627;42628;42629;42630;42631;42632;42633;42634;42635;42636;42637;42638;42639;42640;42641;42642;42643;42644;42645;42646;42647;42648;42649;42650;42651;42652;42653;42654;42655;42656;42657;42658;42659;42660;42661;42662;42663;42664;42665;42666;42667;42668;42669 42654 85 DAEAWFNEKSK Unmodified 1323.6095 0.60953025 72 CON__P13645;P13645 KRT10 Keratin, type I cytoskeletal 10 yes no 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 47.874 47.934 2 0.0082992 54787 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 95.573 83.726 + 57777000 0 0 0 8507900 2537300 5502200 3499800 8929400 5264500 8729100 0 8680500 6126400 0 0 6408 72 5846 53934;53935;53936;53937;53938;53939;53940;53941;53942 42670;42671;42672 42672 3 DAEDAMDAMDGAVLDGR Oxidation (M) 1766.7087 0.7087283 2050 Q01130 SRSF2 Serine/arginine-rich splicing factor 2 yes yes 0 1 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 15 1 2 2 1 1 2 2 2 1 1 64.965 65.032 2 1.3116E-13 75245 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 91.914 91.914 38641000 0 0 0 3422100 4160000 0 5511900 2189900 0 2866000 8551800 3972400 2229600 2778900 2958800 6409 2050 5847 53943;53944;53945;53946;53947;53948;53949;53950;53951;53952;53953;53954;53955;53956;53957 42673;42674;42675;42676;42677;42678;42679;42680;42681;42682;42683 42683 3332;3333 11 DAEDAMDAMDGAVLDGR 2 Oxidation (M) 1782.7036 0.70364292 2050 Q01130 SRSF2 Serine/arginine-rich splicing factor 2 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 44.157 44.275 2 3.7013E-32 48810 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 122.42 119.91 11536000 0 0 0 0 5061100 0 0 0 0 0 0 0 0 0 6475000 6410 2050 5847 53958;53959;53960;53961 42684;42685;42686;42687 42684 3332;3333 4 DAEDAMDAMDGAVLDGR Unmodified 1750.7138 0.71381368 2050 Q01130 SRSF2 Serine/arginine-rich splicing factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 79.226 79.238 2 4.7859E-41 91671 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 146.5 143.08 64886000 0 0 0 3856200 5995000 0 0 0 0 0 8389200 18668000 6163300 6366300 15448000 6411 2050 5847 53962;53963;53964;53965;53966;53967;53968 42688;42689;42690;42691;42692;42693;42694;42695 42689 8 DAEDWFFSK Unmodified 1143.4873 0.48728985 84 CON__Q04695;Q04695 KRT17 Keratin, type I cytoskeletal 17 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 81.421 81.496 2 0.020437 94448 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 62.582 46.035 + 276040000 0 0 0 59661000 0 0 0 30690000 0 32042000 21783000 33118000 79288000 0 19455000 6412 84 5848 53969;53970;53971;53972;53973;53974;53975 42696 42696 1 DAEEEGGDQAGQNIRK Unmodified 1715.7711 0.77106928 3642 Q92620 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15.39 14.98 3 8.946E-24 13894 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 118.52 96.972 148430000 5796800 25967000 0 6964100 6600300 8556000 10010000 4202000 7529000 7683600 14798000 13662000 11301000 11772000 13590000 6413 3642 5849 53976;53977;53978;53979;53980;53981;53982;53983;53984;53985;53986;53987;53988;53989 42697;42698;42699;42700;42701;42702;42703;42704;42705;42706;42707;42708 42705 12 DAEEWFFTK Unmodified 1171.5186 0.51858998 56 CON__P02533;P02533 KRT14 Keratin, type I cytoskeletal 14 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81.623 81.159 2 0.0032531 94346 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 90.657 75.881 + 3303000000 0 70123000 4306300 429160000 131260000 230170000 100890000 496640000 142610000 272250000 243750000 320650000 542850000 146860000 171460000 6414 56 5850 53990;53991;53992;53993;53994;53995;53996;53997;53998;53999;54000;54001;54002;54003 42709;42710;42711;42712;42713;42714;42715;42716;42717;42718;42719;42720;42721;42722;42723;42724;42725;42726;42727;42728;42729;42730;42731;42732;42733;42734;42735;42736 42720 28 DAEEWFHAK Unmodified 1131.4985 0.49852324 73 CON__P13646-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 51.046 51.352 2 0.0034132 58064 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 105.57 95.98 + 331720000 0 0 0 0 0 0 106850000 140950000 0 0 0 34361000 49563000 0 0 6415 73 5851 54004;54005;54006;54007 42737;42738;42739;42740;42741;42742;42743 42740 7 DAEFYEHR Unmodified 1065.4516 0.45157304 642 O95340 PAPSS2 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching 10 0 5 1 1 1 1 1 24.635 24.862 2 0.047929 25831 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 47.657 37.67 13745000 0 0 0 2819500 0 0 0 3721300 0 1514700 0 4518200 0 1171400 0 6416 642 5852 54008;54009;54010;54011;54012 42744 42744 1 DAEGILEDLQSYRGAGHEIREAIQHPADEK Unmodified 3346.6178 0.61781011 4654 Q9NUQ9 FAM49B Protein FAM49B yes yes 0 0 2 By MS/MS 2 0 1 1 90.252 82.121 5 0.0011132 106562 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 27.863 25.845 20522000 20522000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6417 4654 5853 54013 42745 42745 1 DAEGLAARDVQK Unmodified 1271.647 0.64697839 3871 Q96HW7 INTS4 Integrator complex subunit 4 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 29.521 25.175 2 0.0001767 33097 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.76 92.604 15287000 0 15287000 0 0 0 0 0 0 0 0 0 0 0 0 0 6418 3871 5854 54014;54015 42746;42747 42746 1 DAEKPVLFFER Unmodified 1349.698 0.69795133 1223 P27707 DCK Deoxycytidine kinase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 75.157 75.213 3 0.013521 86645 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 42.843 33.889 56427000 0 0 0 3239300 2020800 3392000 3567200 6661200 2199400 4204300 5434900 8739900 0 5454500 11514000 6419 1223 5855 54016;54017;54018;54019;54020;54021;54022;54023;54024;54025;54026 42748;42749;42750;42751;42752;42753 42751 6 DAELAWIDGVLDMRVSK Unmodified 1916.9666 0.96659797 4818 Q9P2I0 CPSF2 Cleavage and polyadenylation specificity factor subunit 2 yes yes 0 0 1 By MS/MS 2 0 1 1 98.738 90.608 3 2.1792E-13 116888 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.579 76.64 9360800 9360800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6420 4818 5856 54027 42754 42754 1 DAELIAEAK Unmodified 958.49713 0.49712625 952 P11532 DMD Dystrophin yes yes 0 0 0 By MS/MS 10 0 1 1 39.087 39.247 2 0.041598 43631 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 61.679 31.067 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6421 952 5857 54028 42755 42755 1 DAELQDQEFGK Unmodified 1278.5728 0.57281039 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.53 40.714 2 1.2722E-05 45345 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 137.05 116.72 295430000 0 0 0 21579000 16410000 25866000 28934000 22786000 0 25092000 37681000 31943000 30241000 19951000 34946000 6422 4285 5858 54029;54030;54031;54032;54033;54034;54035;54036;54037;54038;54039;54040 42756;42757;42758;42759;42760;42761;42762;42763;42764;42765;42766;42767;42768 42764 13 DAEMDRIFANTESYLK Unmodified 1901.8829 0.88292792 2170 Q09161 NCBP1 Nuclear cap-binding protein subunit 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 89.081 85.415 3 1.5752E-40 106180 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 142.01 138.03 103630000 0 101280000 2347100 0 0 0 0 0 0 0 0 0 0 0 0 6423 2170 5859 54041;54042 42769 42769 1 DAEMPATEK Oxidation (M) 1006.4277 0.42772606 1124 P21333 FLNA Filamin-A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 6.7638 6.9686 2 0.0072709 5114 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 63.419 51.65 18492000 0 0 0 0 0 0 1247400 0 0 3668500 3252200 1605400 1509100 2483700 4725900 6424 1124 5860 54043;54044;54045;54046;54047;54048;54049 42770;42771;42772;42773;42774;42775 42773 1609 6 DAENHEAQLK Unmodified 1153.5364 0.53636531 5087 Q9Y266 NUDC Nuclear migration protein nudC yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.58 3.75 4 3 5 2 4 1 2 2 1 10.25 8.4239 2;3 0.00012383 7255 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 142.83 110.47 3946400000 65105000 3723300000 19024000 0 0 0 0 0 0 0 90865000 22735000 0 0 25395000 6425 5087 5861 54050;54051;54052;54053;54054;54055;54056;54057;54058;54059;54060;54061 42776;42777;42778;42779;42780;42781;42782 42778 6 DAEQLVK Unmodified 801.42323 0.42323303 240 O15014 ZNF609 Zinc finger protein 609 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 22.89 23.217 2 0.034226 24399 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 71.378 19.079 17389000 0 0 0 0 0 0 0 0 1544700 3341700 0 0 3665400 4298300 4539200 6426 240 5862 54062;54063;54064;54065;54066 42783 42783 1 DAESFLLK Unmodified 921.48075 0.48074791 1276 P30305 CDC25B M-phase inducer phosphatase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 67.085 67.234 2 0.026049 76265 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.194 10.451 28897000 0 0 0 0 2540900 2844600 2568800 2124600 0 2527800 2756400 3918700 2535600 2491900 4587700 6427 1276 5863 54067;54068;54069;54070;54071;54072;54073;54074;54075;54076 42784 42784 1 DAETGEEVTHYLVK Unmodified 1589.7573 0.7573167 3497 Q8TD26 CHD6 Chromodomain-helicase-DNA-binding protein 6 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 67.65 62.346 3 0.017646 79863 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 35.763 15.1 14066000 0 14066000 0 0 0 0 0 0 0 0 0 0 0 0 0 6428 3497 5864 54077;54078 42785 42785 1 DAETWFLSK Unmodified 1095.5237 0.52367535 70 CON__P08779;P08779 KRT16 Keratin, type I cytoskeletal 16 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 2 1 1 1 1 2 1 1 1 1 1 1 77.683 77.713 2 0.0035031 89771 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 103.56 35.582 + 1443700000 0 0 0 201290000 36681000 35780000 50547000 155260000 31502000 91673000 49278000 65823000 652090000 45122000 28679000 6429 70 5865 54079;54080;54081;54082;54083;54084;54085;54086;54087;54088;54089;54090;54091;54092 42786;42787;42788;42789;42790;42791;42792;42793;42794;42795;42796;42797;42798;42799;42800;42801;42802 42787 17 DAEVIVDWRPLDDALDSSSILYARK Unmodified 2846.445 0.44503769 3485 Q8TC07 TBC1D15 TBC1 domain family member 15 yes yes 0 0 2 By MS/MS 2.33 0.471 2 1 3 97.425 90.836 3;4 8.8985E-91 115696 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 140.87 133.6 48175000 48175000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6430 3485 5866 54093;54094;54095 42803;42804;42805 42805 3 DAFADAVQR Unmodified 991.47231 0.47230849 3690 Q92945 KHSRP Far upstream element-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.245 40.424 2 1.7924E-05 45063 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 133.6 28.464 1527900000 0 0 0 90053000 93305000 91579000 105060000 91428000 84129000 149790000 169590000 152660000 118440000 136960000 244950000 6431 3690 5867 54096;54097;54098;54099;54100;54101;54102;54103;54104;54105;54106;54107 42806;42807;42808;42809;42810;42811;42812;42813;42814;42815;42816;42817;42818 42807 10 DAFDRNPELQNLLLDDFFK Unmodified 2309.1328 0.13281167 1680 P52209 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.43 0.495 4 3 2 4 1 99.814 95.112 2;3 6.7558E-49 114995 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 149.34 113.66 773510000 676180000 93159000 4170500 0 0 0 0 0 0 0 0 0 0 0 0 6432 1680 5868 54108;54109;54110;54111;54112;54113;54114 42819;42820;42821;42822;42823;42824;42825;42826 42823 6 DAFDSFERLK Unmodified 1226.5932 0.5931519 3341 Q8N584 TTC39C Tetratricopeptide repeat protein 39C yes yes 0 0 1 By MS/MS 2 0 1 1 75.993 67.863 3 0.0042847 89456 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.379 69.492 17850000 17850000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6433 3341 5869 54115 42827 42827 1 DAFDTLFDHAPDK Unmodified 1490.6678 0.66777341 4665;4500 Q9NVD7;Q9HBI1 PARVA;PARVB Alpha-parvin;Beta-parvin no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 79.263 79.402 3 0.00033188 91787 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 72.681 55.016 176750000 0 0 0 0 0 26921000 8185800 0 9167400 26193000 12668000 12828000 21945000 15951000 42889000 6434 4665;4500 5870 54116;54117;54118;54119;54120;54121;54122;54123;54124;54125 42828;42829;42830;42831;42832;42833;42834;42835;42836;42837;42838;42839 42829 12 DAFEHIVTQFSSVPVSVVSDSYDIYNACEK Unmodified 3405.5711 0.57110242 1481 P43490 NAMPT Nicotinamide phosphoribosyltransferase yes yes 0 0 0 By MS/MS 2 0 1 1 98.955 90.824 3 1.2136E-57 117136 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 109.44 104.63 23081000 23081000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6435 1481 5871 54126 42840;42841 42840 2 DAFITQAQEQQIELLEIPEHSDIK Unmodified 2794.4025 0.40250417 2862 Q69YN2 CWF19L1 CWF19-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 93.837 88.525 3 2.6113E-24 112306 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 103.02 101.31 21227000 18844000 0 2382100 0 0 0 0 0 0 0 0 0 0 0 0 6436 2862 5872 54127;54128 42842;42843 42842 2 DAFLTLAR Unmodified 905.49707 0.49706667 3662;2171 Q09472;Q92793 EP300;CREBBP Histone acetyltransferase p300;CREB-binding protein no no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 70.855 70.912 2 0.0074646 82392 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 89.55 32.269 145020000 0 0 0 8917200 9284700 12752000 10652000 11871000 8515800 13266000 0 17982000 15109000 14082000 22586000 6437 2171;3662 5873 54129;54130;54131;54132;54133;54134;54135;54136;54137;54138;54139 42844;42845;42846;42847;42848;42849;42850;42851;42852 42851 8 DAFLVFR Unmodified 866.46504 0.46503826 5276;5277 Q9Y6D5;Q9Y6D6 ARFGEF2;ARFGEF1 Brefeldin A-inhibited guanine nucleotide-exchange protein 2;Brefeldin A-inhibited guanine nucleotide-exchange protein 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 80.381 80.492 2 0.03857 93128 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 69.432 54.211 14065000 0 0 0 0 0 3424800 0 0 0 3423800 0 0 0 0 7216200 6438 5276;5277 5874 54140;54141;54142 42853;42854;42855 42854 3 DAFPPLPEK Unmodified 1012.5229 0.52294707 2033 Q00341 HDLBP Vigilin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 66.007 65.039 2 0.0090908 80729 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.294 67.006 185380000 0 145780000 0 4626100 0 7831200 0 6614300 7013500 0 0 13513000 0 0 0 6439 2033 5875 54143;54144;54145;54146;54147;54148;54149;54150;54151 42856;42857;42858;42859;42860;42861;42862;42863;42864;42865;42866;42867 42859 12 DAFPVAGQK Unmodified 931.47633 0.47633123 1745;1746 P54725;P54727 RAD23A;RAD23B UV excision repair protein RAD23 homolog A;UV excision repair protein RAD23 homolog B no no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 6.12 3.89 3 1 4 1 2 1 1 1 1 1 36.994 34.511 2 0.014232 37947 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 58.604 38.758 1624100000 83518000 1440900000 800200 10996000 10146000 0 0 0 0 0 0 0 17732000 60032000 0 6440 1745;1746 5876 54152;54153;54154;54155;54156;54157;54158;54159 42868;42869;42870 42870 1 DAFVAIVQSVK Unmodified 1175.655 0.65502388 857 P08133 ANXA6 Annexin A6 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 82.135 82.278 2 0.021773 95387 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 42.161 27.487 20102000 0 0 0 0 0 1677700 997810 1446300 0 0 3026700 6283600 1704200 0 4965900 6441 857 5877 54160;54161;54162;54163;54164;54165;54166 42871 42871 1 DAGADLDKPEPTCGR Unmodified 1600.7151 0.71513431 2562 Q15653 NFKBIB NF-kappa-B inhibitor beta yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 27.562 27.954 3 0.0062287 29112 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.555 28.989 28714000 0 0 0 0 0 2130400 0 0 0 4317500 5027900 4973400 3855600 0 8409500 6442 2562 5878 54167;54168;54169;54170;54171;54172 42872;42873 42872 2 DAGEGGLSLAIEGPSK Unmodified 1499.7468 0.74675201 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.48 3.99 2 7 2 14 4 6 1 1 1 1 1 1 1 1 2 1 1 1 2 74.777 73.491 2 6.1493E-210 87999 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 256.7 219.35 4453700000 130590000 3881000000 3967000 9528100 18015000 35557000 24583000 17543000 21658000 40521000 59014000 56787000 29089000 40102000 85731000 6443 1124 5879 54173;54174;54175;54176;54177;54178;54179;54180;54181;54182;54183;54184;54185;54186;54187;54188;54189;54190;54191;54192;54193;54194;54195;54196;54197 42874;42875;42876;42877;42878;42879;42880;42881;42882;42883;42884;42885;42886;42887;42888;42889;42890;42891;42892;42893;42894;42895;42896;42897;42898 42877 24 DAGEGLLAVQITDPEGK Unmodified 1711.8628 0.8628444 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.6 3.2 4 1 1 2 1 1 83.957 79.977 2;3 5.1053E-35 100526 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 158.01 153.39 1088000000 49196000 1018400000 9608600 0 0 0 0 0 10722000 0 0 0 0 0 0 6444 1124 5880 54198;54199;54200;54201;54202 42899;42900;42901;42902;42903;42904;42905;42906 42905 7 DAGEGLLAVQITDPEGKPK Unmodified 1937.0106 0.010571271 1124 P21333 FLNA Filamin-A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.95 3.75 5 3 12 2 4 2 1 1 1 1 1 1 1 1 1 1 1 1 78.216 76.596 2;3 2.445E-38 88261 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 113.53 113.53 2342300000 180610000 1591800000 69767000 14615000 19055000 29814000 26633000 29926000 21708000 51344000 49937000 67825000 27816000 42940000 118480000 6445 1124 5881 54203;54204;54205;54206;54207;54208;54209;54210;54211;54212;54213;54214;54215;54216;54217;54218;54219;54220;54221;54222 42907;42908;42909;42910;42911;42912;42913;42914;42915;42916;42917;42918;42919;42920;42921;42922;42923;42924;42925;42926;42927;42928;42929 42913 22 DAGFSSPDGSDPK Unmodified 1278.5364 0.53642488 3470 Q8TAF3 WDR48 WD repeat-containing protein 48 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 27.616 27.803 2 0.0032109 29976 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 72.321 59.694 50906000 0 0 0 3464800 4660100 4853400 4578500 0 4444600 5166600 9005500 4229500 0 5356500 5146900 6446 3470 5882 54223;54224;54225;54226;54227;54228;54229;54230;54231;54232;54233 42930;42931;42932;42933;42934;42935;42936;42937;42938 42930 9 DAGGGAGAAGRDELVSR Unmodified 1557.7495 0.74954598 2929 Q6P2P2 PRMT9 Putative protein arginine N-methyltransferase 9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 28.667 28.76 3 0.0037893 30197 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 28.083 16.469 22851000 0 0 0 0 2620700 3897400 4646300 0 3181100 0 0 0 0 0 8505300 6447 2929 5883 54234;54235;54236;54237;54238 42939 42939 1 DAGGMVIDMK Unmodified 1035.4729 0.47290211 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 55.943 56.129 2 0.012297 62603 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.725 35.486 52759000 0 0 0 3086300 0 2558300 2434400 6451800 0 3674300 5109400 8029800 5060000 7027800 9327300 6448 1364 5884 54239;54240;54241;54242;54243;54244;54245;54246;54247;54248 42940;42941;42942;42943 42940 4 DAGGMVIDMK 2 Oxidation (M) 1067.4627 0.46273136 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 2 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching 10 0 8 1 1 1 2 1 1 1 21.256 21.367 2 0.012259 22200 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 40.724 21.02 18893000 0 0 0 0 2172000 2780100 3493600 3476600 0 2941800 0 0 0 0 4028500 6449 1364 5884 54249;54250;54251;54252;54253;54254;54255;54256 42944;42945;42946 42944 2111;2112 3 DAGGMVIDMK Oxidation (M) 1051.4678 0.46781673 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 1 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 35.154 35.389 2 0.016005 39092 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 45.022 30.885 9191300 0 0 0 0 0 0 0 4322300 0 0 0 0 0 4868900 0 6450 1364 5884 54257;54258;54259 42947;42948 42947 2111;2112 2 DAGHPLYPFNDPY Unmodified 1504.6623 0.6622941 999 P14550 AKR1A1 Alcohol dehydrogenase [NADP(+)] yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 80.456 80.631 2 0.0022711 92845 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.426 49.194 46721000 0 0 0 0 0 0 0 0 0 0 7605900 6974700 0 5010000 27131000 6451 999 5885 54260;54261;54262;54263 42949;42950;42951;42952 42949 4 DAGIYTCIATNR Unmodified 1353.6347 0.63469914 3581 Q8WX93 PALLD Palladin yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 56.902 57.029 2 0.0049456 64010 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.096 43.369 20694000 0 0 0 0 2420000 0 0 0 0 0 0 0 5023300 5845000 7406100 6452 3581 5886 54264;54265;54266;54267 42953 42953 1 DAGLIEANGELK Unmodified 1228.6299 0.62993134 2387 Q14186 TFDP1 Transcription factor Dp-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 56.39 56.519 2 0.0029093 69477 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.201 32.004 30056000 0 0 0 2628900 0 0 3693700 0 0 0 8293600 0 0 6255200 9184200 6453 2387 5887 54268;54269;54270;54271;54272;54273;54274 42954;42955;42956;42957 42955 4 DAGNFDQNK Unmodified 1007.4308 0.4308376 3041 Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 10.699 10.837 2 0.018695 9691 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 54.611 47.701 65718000 0 0 0 0 0 13691000 9908300 8239100 13042000 6364600 0 6981900 7490800 0 0 6454 3041 5888 54275;54276;54277;54278;54279;54280;54281;54282 42958;42959;42960;42961 42958 3 DAGNFDQNKLEEEMRK Unmodified 1922.8792 0.87923952 3041 Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 0 0 2 By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By matching 10 0 13 1 1 2 2 2 2 2 1 52.473 52.607 3;4 0.0017952 59498 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 70.98 68.505 65169000 0 0 0 5673500 3380800 0 11266000 13448000 0 8998400 0 11854000 7401200 3146900 0 6455 3041 5889 54283;54284;54285;54286;54287;54288;54289;54290;54291;54292;54293;54294;54295 42962;42963 42962 1 DAGQCIDPYITVSVK Unmodified 1664.808 0.80797206 3758 Q96BJ3 AIDA Axin interactor, dorsalization-associated protein yes yes 0 0 0 By MS/MS 2 0 1 1 80.311 75.599 2 0.016178 94184 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 46.069 28.404 48265000 0 48265000 0 0 0 0 0 0 0 0 0 0 0 0 0 6456 3758 5890 54296 42964 42964 1 DAGQISGLNVLR Unmodified 1241.6728 0.67279921 1399 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.502 73.57 2 8.808E-09 83766 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 178.94 151.68 466600000 0 0 0 21500000 19373000 26437000 23692000 25303000 25321000 41991000 41612000 65132000 36391000 41674000 98171000 6457 1399 5891 54297;54298;54299;54300;54301;54302;54303;54304;54305;54306;54307;54308 42965;42966;42967;42968;42969;42970;42971;42972;42973;42974;42975;42976;42977;42978;42979;42980 42974 15 DAGQRTTIYK Unmodified 1151.5935 0.59348625 5067 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 2 3 2 19.093 15.507 2;3 6.9898E-05 20486 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 133.99 77.272 1277700000 713570000 508560000 55611000 0 0 0 0 0 0 0 0 0 0 0 0 6458 5067 5892 54309;54310;54311;54312;54313;54314;54315 42981;42982;42983;42984 42982 3 DAGTIAGLNVLR Unmodified 1198.667 0.66698555 934 P11142 HSPA8 Heat shock cognate 71 kDa protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.97 2.64 3 1 26 1 2 1 2 2 2 3 2 1 2 3 2 2 2 3 79.169 78.61 2;3 1.7463E-22 95890 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 164.68 132.75 9137200000 20727000 606210000 13503000 366740000 307110000 440770000 423170000 392490000 326910000 640120000 1005500000 1077500000 491910000 812270000 2212300000 6459 934 5893 54316;54317;54318;54319;54320;54321;54322;54323;54324;54325;54326;54327;54328;54329;54330;54331;54332;54333;54334;54335;54336;54337;54338;54339;54340;54341;54342;54343;54344;54345 42985;42986;42987;42988;42989;42990;42991;42992;42993;42994;42995;42996;42997;42998;42999;43000;43001;43002;43003;43004;43005;43006;43007;43008;43009;43010;43011;43012 42989 27 DAGTIAGLNVLRIINEPTAAAIAYGLDK Unmodified 2839.5444 0.5443578 934 P11142 HSPA8 Heat shock cognate 71 kDa protein yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 100.95 96.888 3 9.9993E-12 119964 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.913 70.473 19511000 0 19511000 0 0 0 0 0 0 0 0 0 0 0 0 0 6460 934 5894 54346;54347 43013;43014;43015;43016 43014 4 DAGTIAGLNVMR Oxidation (M) 1232.6183 0.6183208 932 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57.26 56.673 2 2.1031E-06 64713 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 111.61 92.336 1544900000 0 72705000 2826900 97746000 79011000 102620000 103960000 79772000 82343000 125460000 157590000 202340000 122430000 107150000 208940000 6461 932 5895 54348;54349;54350;54351;54352;54353;54354;54355;54356;54357;54358;54359;54360;54361 43017;43018;43019;43020;43021;43022;43023;43024;43025;43026;43027;43028;43029;43030;43031;43032;43033;43034 43031 1205 17 DAGTIAGLNVMR Unmodified 1216.6234 0.62340617 932 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 72.762 72.455 2 1.0126E-17 88920 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 154.56 112.45 1585700000 0 134770000 0 65297000 76137000 81586000 76181000 76493000 67341000 117430000 193760000 167640000 103730000 133480000 291840000 6462 932 5895 54362;54363;54364;54365;54366;54367;54368;54369;54370;54371;54372;54373;54374 43035;43036;43037;43038;43039;43040;43041;43042;43043;43044;43045;43046;43047;43048;43049;43050;43051 43040 17 DAGTITGLNVLR Unmodified 1228.6776 0.67755023 1743 P54652 HSPA2 Heat shock-related 70 kDa protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.922 76.984 2 2.3619E-05 88862 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 91.584 55.25 64357000 0 0 0 2558400 2602900 3360700 3835000 4716800 3137800 4848400 6758400 7742300 4280200 6511500 14004000 6463 1743 5896 54375;54376;54377;54378;54379;54380;54381;54382;54383;54384;54385;54386 43052;43053;43054;43055;43056;43057;43058;43059;43060;43061;43062 43057 11 DAGVIAGLNVLR Unmodified 1196.6877 0.68772099 908 P0DMV9;P0DMV8 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 1 1 2 2 1 1 2 1 1 1 2 83.561 83.656 2;3 3.42E-08 97344 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 124.74 108.78 3012500000 0 0 0 32986000 59690000 112030000 173390000 175400000 140990000 238150000 400160000 339850000 154850000 294740000 890210000 6464 908 5897 54387;54388;54389;54390;54391;54392;54393;54394;54395;54396;54397;54398;54399;54400;54401;54402 43063;43064;43065;43066;43067;43068;43069;43070;43071;43072 43070 9 DAGYGGISLAVEGPSK Unmodified 1519.7518 0.75183739 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 2 1 1 73.557 73.728 2 2.6505E-11 84421 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 97.69 85.111 34602000 0 0 0 0 0 5614400 0 0 0 4760100 11136000 0 0 0 13091000 6465 487 5898 54403;54404;54405;54406;54407;54408;54409 43073;43074;43075;43076;43077;43078;43079;43080;43081 43075 9 DAGYGGLSLSIEGPSK Unmodified 1549.7624 0.76240208 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 77.71 77.808 2 0.0045739 89354 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.073 63.117 130410000 0 0 0 0 3821100 5661700 4681100 0 6768400 14458000 25382000 17359000 9435600 14278000 28564000 6466 1124 5899 54410;54411;54412;54413;54414;54415;54416;54417;54418;54419 43082;43083;43084 43082 0 DAHLLVESK Unmodified 1010.5397 0.53965977 1464 P42704 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 0 0 By matching By matching By MS/MS 2 0 3 1 1 1 35.987 31.103 2 0.020334 39102 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 75.378 37.14 45754000 7684100 26503000 11567000 0 0 0 0 0 0 0 0 0 0 0 0 6467 1464 5900 54420;54421;54422 43085 43085 1 DAHNALLDIQSSGR Unmodified 1495.7379 0.73791866 4033 Q99613;B5ME19 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.4 2.04 1 1 23 2 1 2 2 2 2 2 2 2 2 2 2 2 56.25 55.97 2;3 0.00016657 62899 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 79.804 42.66 447770000 0 67766000 0 14942000 13724000 28959000 23799000 27236000 19083000 30161000 46621000 47702000 33745000 35145000 58890000 6468 4033 5901 54423;54424;54425;54426;54427;54428;54429;54430;54431;54432;54433;54434;54435;54436;54437;54438;54439;54440;54441;54442;54443;54444;54445;54446;54447 43086;43087;43088;43089;43090;43091;43092;43093;43094;43095;43096;43097;43098;43099;43100;43101;43102;43103;43104 43101 17 DAHNALLDIQSSGRAK Unmodified 1694.87 0.86999547 4033 Q99613;B5ME19 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 0 0 1 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 3 1 2 55.106 49.207 3;4 0.00030458 67026 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.051 65.075 428430000 362010000 31984000 34432000 0 0 0 0 0 0 0 0 0 0 0 0 6469 4033 5902 54448;54449;54450;54451;54452;54453 43105;43106;43107;43108;43109;43110;43111 43108 6 DAHSIHGTNPQYLVEK Unmodified 1807.8853 0.88531118 3383 Q8NAV1 PRPF38A Pre-mRNA-splicing factor 38A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.65 3.65 5 12 2 1 2 1 1 1 1 1 1 1 1 1 1 1 1 45.205 43.6 3;4 9.0777E-39 60290 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 117 104.16 517340000 205320000 35386000 37968000 13438000 9209800 15449000 14087000 13633000 20357000 21022000 26786000 31065000 23031000 18031000 32558000 6470 3383 5903 54454;54455;54456;54457;54458;54459;54460;54461;54462;54463;54464;54465;54466;54467;54468;54469;54470 43112;43113;43114;43115;43116;43117;43118;43119;43120;43121;43122;43123;43124;43125 43117 11 DAHSQGEVVSCLEK Unmodified 1557.7093 0.70932065 3682 Q92896 GLG1 Golgi apparatus protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 44.198 39.185 3 0.014598 50769 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 37.913 7.0854 45793000 0 45793000 0 0 0 0 0 0 0 0 0 0 0 0 0 6471 3682 5904 54471;54472 43126 43126 1 DAHSTLLSK Unmodified 970.50836 0.50835964 4078 Q9BPW8 NIPSNAP1 Protein NipSnap homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.12 3.72 2 1 5 1 2 1 1 1 1 1 22.217 20.352 2 0.003099 21377 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 127.68 87.411 95846000 7754700 31154000 0 0 12527000 0 14192000 12339000 0 0 0 0 0 17880000 0 6472 4078 5905 54473;54474;54475;54476;54477;54478;54479;54480 43127;43128;43129;43130;43131;43132;43133 43127 6 DAHVDFLK Unmodified 943.47633 0.47633123 4672 Q9NVM9 ASUN Protein asunder homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 46.382 46.568 2 0.016586 52347 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 67.032 44.013 16084000 0 0 0 0 0 4131700 0 4850800 0 0 0 0 7101300 0 0 6473 4672 5906 54481;54482;54483 43134;43135 43134 2 DAIAALGLLQK Unmodified 1111.6601 0.66010926 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 85.036 85.103 2 2.0061E-05 98712 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 124.23 93.976 260800000 0 0 0 11466000 17045000 22169000 19323000 23144000 12582000 24345000 21820000 30934000 21388000 23539000 33042000 6474 19 5907 54484;54485;54486;54487;54488;54489;54490;54491;54492;54493;54494;54495 43136;43137;43138;43139;43140;43141;43142;43143;43144;43145;43146;43147;43148;43149;43150 43143 15 DAIAILDGIPSR Unmodified 1239.6823 0.68230126 4944 Q9UJX3 ANAPC7 Anaphase-promoting complex subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 84.169 84.234 2 2.5787E-05 97515 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 112.13 83.731 335900000 0 0 0 12259000 17660000 33285000 22329000 24618000 21871000 31929000 30630000 39719000 25587000 25547000 50468000 6475 4944 5908 54496;54497;54498;54499;54500;54501;54502;54503;54504;54505;54506;54507 43151;43152;43153;43154;43155;43156;43157;43158;43159;43160;43161;43162 43151 12 DAIAQAVR Unmodified 842.46102 0.46101552 1249 P29401 TKT Transketolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 27.436 28.054 2 0.012535 29058 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.415 42.06 16221000 0 0 0 0 0 0 0 0 0 0 4142700 4282100 0 0 7796300 6476 1249 5909 54508;54509;54510 43163;43164 43163 2 DAIASLRLDGTK Unmodified 1258.6881 0.68811492 2295 Q13459 MYO9B Unconventional myosin-IXb yes yes 0 0 1 By MS/MS 3 0 1 1 62.792 58.027 3 0.046456 71339 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 27.681 14.281 4513200 0 4513200 0 0 0 0 0 0 0 0 0 0 0 0 0 6477 2295 5910 54511 43165 43165 1 DAIDPLLFK Unmodified 1030.5699 0.56989727 4605 Q9NRL2 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 82.98 83.042 2 0.02741 95677 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.418 40.999 62872000 0 0 0 2823000 3640300 5550100 4448600 3968900 3484600 4775400 8818800 5548700 0 7159500 12654000 6478 4605 5911 54512;54513;54514;54515;54516;54517;54518;54519;54520;54521;54522 43166;43167;43168 43168 3 DAIEELVK Unmodified 915.49131 0.49131259 1614 P49959 MRE11A Double-strand break repair protein MRE11A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 62.939 61.89 1;2 0.006867 69830 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 93.195 39.844 869410000 474340 509550000 0 21100000 21733000 29051000 27014000 21929000 24031000 31562000 36730000 43571000 26579000 24226000 51855000 6479 1614 5912 54523;54524;54525;54526;54527;54528;54529;54530;54531;54532;54533;54534;54535;54536;54537 43169;43170;43171;43172;43173;43174;43175;43176;43177;43178 43176 9 DAIGISLLK Unmodified 928.55933 0.55933258 3450 Q8NFW8 CMAS N-acylneuraminate cytidylyltransferase yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 83.042 79.046 2 0.021233 98232 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.301 31.826 57746000 0 57746000 0 0 0 0 0 0 0 0 0 0 0 0 0 6480 3450 5913 54538;54539 43179 43179 1 DAIHFYNK Unmodified 1006.4872 0.48723027 1313 P31948 STIP1 Stress-induced-phosphoprotein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.56 3.86 3 1 5 1 2 1 1 1 1 1 1 40.582 38.369 2 0.0025602 47944 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 117.93 76.432 3777000000 2217400000 922170000 426990000 11987000 6300200 0 0 0 0 0 38560000 0 0 37532000 116100000 6481 1313 5914 54540;54541;54542;54543;54544;54545;54546;54547;54548 43180;43181;43182;43183;43184;43185;43186;43187;43188;43189 43185 10 DAILLADLVDSCK Unmodified 1431.7279 0.72793082 1590 P49736 MCM2 DNA replication licensing factor MCM2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.85 2.71 1 1 11 1 1 1 1 1 1 1 1 1 1 1 1 1 90.741 90.393 2 5.6175E-08 105049 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 101.95 82.192 45324000 0 913400 1066400 0 1112000 5188100 1588400 1605200 1783100 3620000 4927300 3927100 1142600 2905000 15545000 6482 1590 5915 54549;54550;54551;54552;54553;54554;54555;54556;54557;54558;54559;54560;54561 43190;43191;43192;43193;43194;43195;43196;43197;43198;43199;43200;43201 43196 12 DAIPENLPPLTADFAEDK Unmodified 1954.9524 0.95238769 65 CON__P02769 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.12 2.45 2 1 23 3 1 2 2 2 2 2 2 2 2 2 2 2 88.457 88.033 2;3 7.9301E-47 107697 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 135.14 127.03 + 2640200000 0 337840000 0 15232000 324800000 143890000 99339000 137620000 153250000 417340000 304460000 234180000 88302000 124360000 259620000 6483 65 5916 54562;54563;54564;54565;54566;54567;54568;54569;54570;54571;54572;54573;54574;54575;54576;54577;54578;54579;54580;54581;54582;54583;54584;54585;54586;54587 43202;43203;43204;43205;43206;43207;43208;43209;43210;43211;43212;43213;43214;43215;43216;43217;43218;43219;43220;43221;43222;43223;43224 43208 16 DAIQVVREELKPDQK Unmodified 1766.9527 0.95266246 4895 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 66.698 66.924 3 0.011374 76335 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 37.657 25.031 136960000 0 0 0 0 0 16741000 0 11279000 10770000 9323100 13623000 17545000 11377000 9618300 36687000 6484 4895 5917 54588;54589;54590;54591;54592;54593;54594;54595;54596 43225;43226;43227;43228;43229;43230;43231 43228 2 DAITQALFLR Unmodified 1146.6397 0.63970816 5044 Q9UNX4 WDR3 WD repeat-containing protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 86.456 86.563 2 0.0016578 100648 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 94.302 66.778 46698000 0 0 0 0 2130000 4248800 3744800 4257200 3307600 4482300 4341600 5781300 3828400 4990200 5585800 6485 5044 5918 54597;54598;54599;54600;54601;54602;54603;54604;54605;54606;54607 43232;43233;43234;43235;43236;43237;43238;43239;43240 43239 9 DALAALETPGRPSQQK Unmodified 1680.8795 0.87949752 3621 Q92547 TOPBP1 DNA topoisomerase 2-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.2 2.4 2 18 1 1 1 1 1 2 1 2 1 2 2 2 1 2 54.749 54.337 2;3 2.8624E-06 61784 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 88.441 64.836 211650000 6545600 0 4548900 16015000 2495600 4109200 28283000 16348000 14217000 4362700 34869000 28045000 17813000 3422200 30578000 6486 3621 5919 54608;54609;54610;54611;54612;54613;54614;54615;54616;54617;54618;54619;54620;54621;54622;54623;54624;54625;54626;54627 43241;43242;43243;43244;43245;43246;43247;43248;43249;43250;43251;43252;43253 43243 13 DALDPRQPGYQPPNPHPGPSSPPAAPASK Unmodified 2945.442 0.442018 4166 Q9BUL9 RPP25 Ribonuclease P protein subunit p25 yes yes 0 0 1 By MS/MS 2 0 1 1 58.621 54.818 4 4.1267E-06 68337 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 32.708 29.879 4441400 0 0 4441400 0 0 0 0 0 0 0 0 0 0 0 0 6487 4166 5920 54628 43254;43255 43255 2 DALDQLR Unmodified 829.42938 0.42938104 1790 P57076 C21orf59 UPF0769 protein C21orf59 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 41.516 41.931 2 0.045927 47097 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.138 0 24925000 0 0 0 0 0 6013900 0 0 0 0 8134200 0 0 0 10777000 6488 1790 5921 54629;54630;54631 43256 43256 1 DALEFWLQAGVDGFQVRDIENLK Unmodified 2662.3391 0.33911605 860 P08195 SLC3A2 4F2 cell-surface antigen heavy chain yes yes 0 0 1 By MS/MS 2 0 1 1 100.94 92.811 3 6.5772E-11 119547 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.287 67.807 7958800 7958800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6489 860 5922 54632 43257;43258 43258 2 DALEGEK Unmodified 760.3603 0.36029842 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 8.5792 8.6702 2 0.050331 6720 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 62.717 16.347 1931300 0 0 0 0 0 0 1051000 880270 0 0 0 0 0 0 0 6490 4634 5923 54633;54634 43259 43259 1 DALEPGQR Unmodified 884.43519 0.4351947 847 P07741 APRT Adenine phosphoribosyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.794 15.964 2 0.018051 14585 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.757 26.624 273990000 0 0 0 16247000 8247400 21788000 13739000 11205000 10473000 18148000 31674000 39429000 22208000 26767000 54062000 6491 847 5924 54635;54636;54637;54638;54639;54640;54641;54642;54643;54644;54645;54646 43260;43261;43262;43263;43264 43262 4 DALESAMK Oxidation (M) 879.40078 0.40078303 242 O15027 SEC16A Protein transport protein Sec16A yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 13.38 13.55 2 0.02948 12557 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 48.787 9.1242 36761000 0 0 0 2812700 428890 0 3085400 3927800 3139100 3606900 3772800 5205400 0 6115700 4666500 6492 242 5925 54647;54648;54649;54650;54651;54652;54653;54654;54655;54656 43265;43266 43266 2 DALFASQEK Unmodified 1007.4924 0.49237523 1421 P40855 PEX19 Peroxisomal biogenesis factor 19 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.86 3.4 1 1 5 2 1 1 1 1 1 38.392 37.097 2 0.018576 41507 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 54.712 31.564 191380000 0 164010000 0 0 3021600 3453100 4508800 0 0 0 0 11341000 5042500 0 0 6493 1421 5926 54657;54658;54659;54660;54661;54662;54663 43267;43268;43269;43270 43269 4 DALLAGLK Unmodified 799.48035 0.48035398 2852 Q68CP9 ARID2 AT-rich interactive domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 64.025 62.987 2 0.020537 71998 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 62.717 14.544 157970000 4845200 59821000 0 0 6985300 8170400 0 8876100 7245200 7898400 7814900 11652000 10468000 13298000 10897000 6494 2852 5927 54664;54665;54666;54667;54668;54669;54670;54671;54672;54673;54674;54675 43271;43272 43271 2 DALLDQIR Unmodified 942.51345 0.51344502 147 O00401 WASL Neural Wiskott-Aldrich syndrome protein yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching 10 0 7 1 1 1 1 1 1 1 61.822 62.089 2 0.039356 71136 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 50.703 6.2563 29521000 0 0 0 0 0 3527100 3465700 2607500 0 2769400 4907900 5091800 0 0 7151300 6495 147 5928 54676;54677;54678;54679;54680;54681;54682 43273 43273 1 DALLLIFANK Unmodified 1116.6543 0.6542956 1372 P36406 TRIM23 E3 ubiquitin-protein ligase TRIM23 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 89.803 89.876 2 0.0016578 104219 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 94.302 0 28665000 0 0 0 1106600 987380 2560200 1717000 1430800 2226800 4044600 2302900 3037100 1047300 1980400 6224100 6496 1372 5929 54683;54684;54685;54686;54687;54688;54689;54690;54691;54692;54693;54694 43274;43275;43276;43277;43278;43279;43280;43281;43282;43283;43284;43285;43286;43287;43288 43274 15 DALLSALSIQNYHLECNETK Unmodified 2318.1213 0.12126071 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS 2 0 1 1 91.577 86.667 3 5.2236E-18 107721 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.35 95.991 23949000 0 23949000 0 0 0 0 0 0 0 0 0 0 0 0 0 6497 2047 5930 54695 43289 43289 1 DALNIETAIK Unmodified 1086.5921 0.59208927 840 P07355;A6NMY6 ANXA2;ANXA2P2 Annexin A2;Putative annexin A2-like protein yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 69.08 69.097 2 0.0035119 79353 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 76.221 44.287 40284000 0 0 0 9935300 2157900 3887600 2439600 5735700 1622300 3593600 4993400 5918500 0 0 0 6498 840 5931 54696;54697;54698;54699;54700;54701;54702;54703;54704;54705 43290;43291;43292;43293;43294;43295;43296;43297 43295 8 DALNQATSQVESK Unmodified 1389.6736 0.67358707 4817 Q9P2E9 RRBP1 Ribosome-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 40.965 41.617 2 5.6681E-06 45967 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 96.113 63.699 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6499 4817 5932 54706;54707;54708 43298;43299;43300 43300 3 DALPSGGAGSSLSQGDPDAAIWLGDSLGSMTQK Unmodified 3188.4932 0.49318645 239 O15013 ARHGEF10 Rho guanine nucleotide exchange factor 10 yes yes 0 0 0 By MS/MS 3 0 1 1 95.884 92.617 3 0.010975 110998 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 19.769 17.446 1656000 0 1656000 0 0 0 0 0 0 0 0 0 0 0 0 0 6500 239 5933 54709 43301;43302 43301 2 DALQGFK Unmodified 777.4021 0.40210366 877;866 P08579;P09012 SNRPB2;SNRPA U2 small nuclear ribonucleoprotein B'';U1 small nuclear ribonucleoprotein A no no 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 37.559 37.688 2 0.023344 40692 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 91.584 63.056 1297200000 0 0 0 72538000 87164000 86714000 110090000 104340000 82501000 130250000 159880000 170880000 148190000 144610000 0 6501 866;877 5934 54710;54711;54712;54713;54714;54715;54716;54717;54718;54719;54720 43303;43304;43305;43306 43305 4 DALQQNPGAFR Unmodified 1215.5996 0.59963426 3941 Q96P11 NSUN5 Probable 28S rRNA (cytosine-C(5))-methyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.321 43.495 2 1.5838E-05 49200 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 157.86 134.43 395510000 0 0 0 26421000 29275000 33542000 24666000 22302000 20004000 28904000 47976000 66360000 30755000 26317000 38987000 6502 3941 5935 54721;54722;54723;54724;54725;54726;54727;54728;54729;54730;54731;54732 43307;43308;43309;43310;43311;43312;43313;43314;43315;43316;43317;43318;43319;43320 43319 14 DALQVAQEMK Oxidation (M) 1147.5543 0.55432356 4265 Q9BZG1 RAB34 Ras-related protein Rab-34 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 33.046 33.244 2 0.0014058 36545 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 86.136 49.74 84546000 0 0 0 0 6500800 7495900 7836400 7788700 0 10149000 14948000 13936000 8617600 7272800 0 6503 4265 5936 54733;54734;54735;54736;54737;54738;54739;54740;54741;54742 43321;43322;43323;43324;43325;43326;43327;43328;43329;43330;43331 43321 5723 11 DALQVAQEMK Unmodified 1131.5594 0.55940893 4265 Q9BZG1 RAB34 Ras-related protein Rab-34 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 55.665 55.715 2 0.00047978 63070 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 128.36 100.19 113480000 0 0 0 6745800 9218100 10778000 9062300 12705000 7705000 14328000 20228000 22713000 0 0 0 6504 4265 5936 54743;54744;54745;54746;54747;54748;54749;54750;54751 43332;43333;43334;43335;43336;43337;43338;43339 43332 7 DALRPPLQNINSVQLK Unmodified 1805.0159 0.015931421 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 1 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.318 76.376 3 0.026999 88576 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 28.664 17.289 63200000 0 0 0 2358000 3018100 7129800 3956700 5630000 4692500 7161500 6062300 6591000 4385000 4248100 7967400 6505 2361 5937 54752;54753;54754;54755;54756;54757;54758;54759;54760;54761;54762;54763 43340 43340 1 DALSDLALHFLNK Unmodified 1455.7722 0.7721789 1642 P50991 CCT4 T-complex protein 1 subunit delta yes yes 0 0 0 By MS/MS 10 0 1 1 95.456 95.603 2 0.016155 110891 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.751 41.135 2099500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2099500 6506 1642 5938 54764 43341 43341 1 DALVLHK Unmodified 794.46504 0.46503826 3143 Q86U86 PBRM1 Protein polybromo-1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26.488 25.704 2 0.025135 27381 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 81.381 27.672 176620000 7530100 18249000 26158000 8336700 7855000 8917600 10865000 0 7597800 11736000 10186000 15767000 11603000 16726000 15092000 6507 3143 5939 54765;54766;54767;54768;54769;54770;54771;54772;54773;54774;54775;54776;54777;54778 43342;43343;43344;43345;43346;43347;43348;43349 43343 8 DALYFLDDTAK Unmodified 1270.6081 0.60813326 233 O14975 SLC27A2 Very long-chain acyl-CoA synthetase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 81.297 81.375 2 0.00043594 94251 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 85.377 66.106 79707000 0 0 0 4473200 0 8209700 6869000 9626800 0 0 10999000 13095000 7084100 9069700 10280000 6508 233 5940 54779;54780;54781;54782;54783;54784;54785;54786;54787 43350;43351;43352;43353;43354;43355;43356;43357;43358;43359;43360;43361;43362 43360 13 DAMELPDYVLLTATAK Oxidation (M) 1765.8808 0.88080265 3180 Q86W92 PPFIBP1 Liprin-beta-1 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 89.462 89.572 2 0.00015701 104116 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 70.089 61.389 34662000 0 0 0 0 1898200 1567100 2662800 1723100 2510400 6022300 4734500 7091600 0 2492800 3959300 6509 3180 5941 54788;54789;54790;54791;54792;54793;54794;54795;54796;54797 43363;43364;43365;43366;43367;43368 43368 4796 6 DAMFVFLSDVWLDQVEVLEK Unmodified 2382.1817 0.1817357 1782 P56282 POLE2 DNA polymerase epsilon subunit 2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 105.71 99.81 3 1.1689E-08 125744 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.206 53.415 6908700 6908700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6510 1782 5942 54798;54799 43369;43370 43370 2 DAMLELNASNDR Unmodified 1347.6089 0.60887832 1348 P35250 RFC2 Replication factor C subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 55.121 55.329 2 0.010781 61752 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 56.725 45.089 41054000 0 0 0 0 3376000 4380300 2908100 3198100 0 3859100 4276200 5147800 3667000 4047500 6193900 6511 1348 5943 54800;54801;54802;54803;54804;54805;54806;54807;54808;54809 43371;43372 43371 2 DAMMAMNGK Oxidation (M) 983.38746 0.38745792 2362 Q14011 CIRBP Cold-inducible RNA-binding protein yes yes 0 1 0 By MS/MS 2 0 1 1 21.114 17.401 2 0.034958 22964 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.682 53.011 7283300 0 7283300 0 0 0 0 0 0 0 0 0 0 0 0 0 6512 2362 5944 54810 43373 43373 1 DAMNAAIQQAIK Oxidation (M) 1288.6445 0.64453555 3723 Q969S3 ZNF622 Zinc finger protein 622 yes yes 0 1 0 By matching By MS/MS By matching 10 0 3 1 1 1 45.939 45.917 2 0.0011502 51584 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 65.347 51.344 11957000 0 0 0 3388300 0 0 3931000 0 0 0 4637900 0 0 0 0 6513 3723 5945 54811;54812;54813 43374 43374 5295 1 DAMNLSGR Unmodified 862.3967 0.3967007 4393 Q9H4A3 WNK1 Serine/threonine-protein kinase WNK1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 25.078 25.287 2 0.0091721 26779 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 83.753 60.716 176860000 0 0 0 10972000 8620600 10624000 11168000 13216000 0 17093000 17033000 17267000 22715000 17520000 30631000 6514 4393 5946 54814;54815;54816;54817;54818;54819;54820;54821;54822;54823;54824 43375;43376;43377;43378;43379;43380;43381;43382 43376 8 DAMNLSGR Oxidation (M) 878.39162 0.39161532 4393 Q9H4A3 WNK1 Serine/threonine-protein kinase WNK1 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 8.9062 9.0435 2 0.0080578 6751 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.109 43.82 87013000 0 0 0 0 6694700 6914600 8842500 7970000 5703600 7131700 0 13877000 10972000 7255000 11652000 6515 4393 5946 54825;54826;54827;54828;54829;54830;54831;54832;54833;54834;54835 43383;43384;43385;43386;43387 43384 5854 5 DAMPSDANLNSINK Unmodified 1488.6879 0.68785692 2151 Q08209 PPP3CA Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 53.458 53.091 2 0.011323 60980 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 49.5 40.638 8974300 0 0 0 2905400 2982100 0 3086800 0 0 0 0 0 0 0 0 6516 2151 5947 54836;54837;54838 43388;43389 43389 2 DAMQHAAESRDAELAQK Oxidation (M) 1885.8588 0.85883843 1723 P53675 CLTCL1 Clathrin heavy chain 2 yes yes 0 1 1 By MS/MS 2 0 1 1 20.331 17.617 3 0.0071228 22426 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 40.237 36.405 5058900 0 0 5058900 0 0 0 0 0 0 0 0 0 0 0 0 6517 1723 5948 54839 43390 43390 2800 1 DAMQHAAESRDAELAQK Unmodified 1869.8639 0.86392381 1723 P53675 CLTCL1 Clathrin heavy chain 2 yes yes 0 0 1 By MS/MS 2 0 1 1 32.509 29.238 3 0.0096022 37005 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 39.143 26.588 3773000 0 0 3773000 0 0 0 0 0 0 0 0 0 0 0 0 6518 1723 5948 54840 43391 43391 1 DAMQYASESK Oxidation (M) 1144.4707 0.47065351 2040 Q00610 CLTC Clathrin heavy chain 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.53 3.84 2 3 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 23.453 23.358 2 1.0814E-07 92145 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 153.24 139.65 495520000 140370000 193540000 1399200 5751900 9360300 21653000 10384000 9017000 9453900 17341000 13729000 18257000 13566000 13238000 18460000 6519 2040 5949 54841;54842;54843;54844;54845;54846;54847;54848;54849;54850;54851;54852;54853;54854;54855;54856;54857 43392;43393;43394;43395;43396;43397;43398;43399;43400;43401;43402;43403;43404;43405;43406;43407 43398 3299 16 DAMQYASESK Unmodified 1128.4757 0.47573888 2040 Q00610 CLTC Clathrin heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.48 1 2 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 30.822 30.428 2 0.00035863 92725 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 118.18 100.79 1226200000 154790000 585920000 0 18241000 23509000 40910000 28145000 27876000 19783000 40597000 47115000 44119000 31536000 46518000 117120000 6520 2040 5949 54858;54859;54860;54861;54862;54863;54864;54865;54866;54867;54868;54869;54870;54871;54872;54873 43408;43409;43410;43411;43412;43413;43414;43415;43416;43417;43418;43419;43420;43421;43422;43423;43424;43425;43426;43427;43428;43429 43417 22 DANDVPIQCEISPLISYAGEGLESYVADK Unmodified 3152.486 0.4859758 2599 Q16222 UAP1 UDP-N-acetylhexosamine pyrophosphorylase;UDP-N-acetylgalactosamine pyrophosphorylase;UDP-N-acetylglucosamine pyrophosphorylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 99.676 94.586 3 1.3713E-40 118133 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.84 98.397 170630000 73776000 94287000 2570400 0 0 0 0 0 0 0 0 0 0 0 0 6521 2599 5950 54874;54875;54876 43430;43431;43432;43433 43431 4 DANGNSFATR Unmodified 1051.4683 0.46828574 1905 P62701;Q8TD47;P22090 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 2 1 1 1 1 1 1 1 1 1 1 16.588 16.737 2 1.8177E-08 16720 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 156.62 87.829 805620000 0 0 0 40323000 50331000 55289000 61934000 52945000 43954000 60966000 94205000 92843000 98609000 72545000 81675000 6522 1905 5951 54877;54878;54879;54880;54881;54882;54883;54884;54885;54886;54887;54888;54889 43434;43435;43436;43437;43438;43439;43440;43441;43442;43443;43444;43445 43442 10 DANIALLELSSSK Unmodified 1359.7246 0.72456001 3217 Q8IUD2 ERC1 ELKS/Rab6-interacting/CAST family member 1 yes yes 0 0 0 By MS/MS 3 0 1 1 83.717 80.466 2 0.014758 96439 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 67.519 49.207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6523 3217 5952 54890 43446 43446 1 DANKGTPEETGSYLVSK Unmodified 1794.8636 0.86357268 4869 Q9UDY8 MALT1 Mucosa-associated lymphoid tissue lymphoma translocation protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 77.382 69.251 3 0.017962 91136 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 33.796 17.369 22615000 22615000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6524 4869 5953 54891 43447 43447 1 DANLTALAAIGPR Unmodified 1281.7041 0.70409934 137 O00268;Q92750 TAF4;TAF4B Transcription initiation factor TFIID subunit 4;Transcription initiation factor TFIID subunit 4B yes no 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 80.725 80.714 2 0.034206 93404 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 45.598 36.64 6366800 0 0 0 0 1548400 0 0 0 0 0 0 3391000 1427300 0 0 6525 137 5954 54892;54893;54894 43448 43448 1 DANLYISGLPR Unmodified 1217.6404 0.64043645 2566 Q15717 ELAVL1 ELAV-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 75.544 75.721 2 2.217E-05 86834 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 122.96 105.45 261220000 0 0 0 0 0 0 21888000 18136000 22443000 30880000 34180000 39820000 20840000 25238000 47798000 6526 2566 5955 54895;54896;54897;54898;54899;54900;54901;54902;54903;54904 43449;43450;43451;43452;43453;43454;43455;43456;43457;43458 43452 10 DANLYISGLPRTMTQK Unmodified 1806.9298 0.92981853 2566 Q15717 ELAVL1 ELAV-like protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 80.824 72.693 3 0.023889 95295 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 33.307 23.313 23628000 23628000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6527 2566 5956 54905 43459 43459 1 DANNGNLQLR Unmodified 1113.5527 0.55268407 811 P05455 SSB Lupus La protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 30.335 29.856 2 0.00081652 31384 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 119.29 91.117 435960000 0 126930000 0 13029000 12475000 11894000 15074000 11881000 12552000 21074000 36712000 40253000 35233000 32291000 66553000 6528 811 5957 54906;54907;54908;54909;54910;54911;54912;54913;54914;54915;54916;54917;54918;54919 43460;43461;43462;43463;43464;43465;43466;43467;43468;43469;43470;43471;43472;43473;43474 43465 15 DANNGNLQLRNK Unmodified 1355.6906 0.69057454 811 P05455 SSB Lupus La protein yes yes 0 0 1 By MS/MS By MS/MS 2 0 4 2 2 22.242 18.393 2;3 0.016998 26347 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.948 82.274 161180000 128650000 0 32532000 0 0 0 0 0 0 0 0 0 0 0 0 6529 811 5958 54920;54921;54922;54923 43475;43476;43477 43476 0 DANSVTSSLR Unmodified 1048.5149 0.51490158 5280 Q9Y6E2 BZW2 Basic leucine zipper and W2 domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.61 31.797 2 0.0015438 35013 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 93.098 59.456 147510000 0 0 0 7699600 12189000 11882000 9303800 5921100 6118800 16386000 16816000 20658000 12567000 12806000 15164000 6530 5280 5959 54924;54925;54926;54927;54928;54929;54930;54931;54932;54933;54934;54935 43478;43479;43480;43481;43482;43483;43484;43485;43486;43487;43488;43489 43488 12 DANSVTSSLRK Unmodified 1176.6099 0.6098646 5280 Q9Y6E2 BZW2 Basic leucine zipper and W2 domain-containing protein 2 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 6 2 24 2 4 2 2 2 2 2 2 2 2 2 2 2 2 2 25.255 24.328 2;3 2.8486E-07 31584 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 137.95 112.82 2152300000 44763000 413720000 59503000 131760000 121220000 157560000 138920000 106640000 89113000 130480000 154410000 150770000 125760000 113960000 213760000 6531 5280 5960 54936;54937;54938;54939;54940;54941;54942;54943;54944;54945;54946;54947;54948;54949;54950;54951;54952;54953;54954;54955;54956;54957;54958;54959;54960;54961;54962;54963;54964;54965;54966;54967 43490;43491;43492;43493;43494;43495;43496;43497;43498;43499;43500;43501;43502;43503;43504;43505;43506;43507;43508;43509;43510;43511;43512;43513;43514;43515;43516;43517;43518;43519;43520;43521;43522 43498 21 DANVSGTLVSSSTLEK Unmodified 1606.805 0.80499517 3885 Q96IZ0 PAWR PRKC apoptosis WT1 regulator protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 60.102 60.298 2 0.00044346 68692 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 82.069 70.536 43269000 0 0 0 0 3041100 0 2775500 2492100 0 4584800 5160800 10230000 3241000 4644800 7098800 6532 3885 5961 54968;54969;54970;54971;54972;54973;54974;54975;54976 43523;43524;43525;43526 43526 4 DAPDVVVSAIWK Unmodified 1298.6871 0.68705229 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 86.117 86.248 2 0.0073147 99686 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.284 35.023 16227000 0 0 0 0 0 0 0 2210000 0 3441700 0 0 1689600 3429800 5455900 6533 2804 5962 54977;54978;54979;54980;54981 43527;43528 43527 2 DAPELGYAK Unmodified 962.47091 0.4709115 3476 Q8TAT6 NPLOC4 Nuclear protein localization protein 4 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 36.735 36.922 2 0.036457 40870 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 45.68 32.008 157860000 0 0 0 7183500 6041600 13133000 11038000 8190900 0 14601000 15614000 15512000 12533000 12328000 41689000 6534 3476 5963 54982;54983;54984;54985;54986;54987;54988;54989;54990;54991;54992 43529 43529 1 DAPPLLPSDTGQGYR Unmodified 1585.7736 0.77363546 4550 Q9NPF5 DMAP1 DNA methyltransferase 1-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.586 66.671 2 4.4389E-06 76396 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 83.226 73.272 274560000 0 0 0 20895000 18717000 19052000 24609000 19089000 17601000 26558000 22723000 29364000 22986000 22749000 30217000 6535 4550 5964 54993;54994;54995;54996;54997;54998;54999;55000;55001;55002;55003;55004 43530;43531;43532;43533;43534;43535;43536;43537;43538;43539;43540;43541;43542;43543;43544;43545 43543 16 DAPPLLPSDTGQGYRTVK Unmodified 1913.9847 0.98469087 4550 Q9NPF5 DMAP1 DNA methyltransferase 1-associated protein 1 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 68.174 62.881 3 0.0022344 80446 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 46.159 30.567 22690000 0 22690000 0 0 0 0 0 0 0 0 0 0 0 0 0 6536 4550 5965 55005;55006 43546 43546 1 DAPQDFHPDR Unmodified 1196.521 0.52104959 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.569 24.772 3 0.0046379 26295 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 54.471 38.268 68293000 0 0 0 5005700 3766200 6272700 3893000 3392600 3468500 5605100 6227700 7918100 4121400 6121000 12501000 6537 1124 5966 55007;55008;55009;55010;55011;55012;55013;55014;55015;55016;55017;55018 43547 43547 1 DAPQDFHPDRVK Unmodified 1423.6844 0.68442653 1124 P21333 FLNA Filamin-A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.01 29.203 3 0.0029351 31514 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 57.802 53.256 369940000 0 0 0 17740000 11869000 24583000 17402000 24302000 14537000 25168000 43612000 49556000 28286000 26640000 86248000 6538 1124 5967 55019;55020;55021;55022;55023;55024;55025;55026;55027;55028;55029;55030 43548;43549;43550;43551;43552;43553;43554;43555;43556;43557;43558;43559;43560 43553 12 DAPSLEEVEGHVADGSATEMGTTK Unmodified 2430.0857 0.085663063 2467 Q15003 NCAPH Condensin complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 2 1 6 1 2 1 1 1 1 1 1 74.595 72.907 3 2.8515E-24 86965 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 102.67 98.489 588670000 16500000 484330000 0 0 0 0 0 10016000 0 16711000 10864000 12032000 0 10849000 27375000 6539 2467 5968 55031;55032;55033;55034;55035;55036;55037;55038;55039 43561;43562;43563;43564;43565;43566;43567;43568 43563 8 DAPSLEEVEGHVADGSATEMGTTK Oxidation (M) 2446.0806 0.080577685 2467 Q15003 NCAPH Condensin complex subunit 2 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 70.476 65.251 3 5.4186E-70 79707 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 135.64 134.32 202990000 0 202990000 0 0 0 0 0 0 0 0 0 0 0 0 0 6540 2467 5968 55040;55041 43569;43570 43570 4065 0 DAPSSSSSNSTSNEASGTSSEK Unmodified 2115.8676 0.86760802 674 O95625 ZBTB11 Zinc finger and BTB domain-containing protein 11 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 8.565 8.6697 2 0.048964 6537 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 19.075 19.075 13327000 0 0 0 909660 1521000 949390 0 0 0 1279600 0 2075200 2994400 1887900 1709800 6541 674 5969 55042;55043;55044;55045;55046;55047;55048;55049 43571 43571 1 DAPTHLPSVDLSNPFTK Unmodified 1837.921 0.92102798 2810 Q5VT52 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 2 2 2 2 2 2 2 2 2 1 2 82.329 82.41 2;3 1.2169E-39 95064 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 102.1 98.865 717810000 0 0 0 5918800 25144000 42221000 25981000 51425000 47966000 69475000 53733000 86867000 60911000 78916000 169250000 6542 2810 5970 55050;55051;55052;55053;55054;55055;55056;55057;55058;55059;55060;55061;55062;55063;55064;55065;55066;55067;55068;55069;55070;55071 43572;43573;43574;43575;43576;43577;43578;43579;43580;43581;43582;43583;43584;43585;43586;43587;43588 43576 17 DAPTSPASVASSSSTPSSK Unmodified 1762.8221 0.8221018 2104 Q04726 TLE3 Transducin-like enhancer protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 34.588 34.735 2 0.0030091 37804 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 46.318 39.189 55393000 0 0 0 3127600 2790500 0 5111200 6118600 3575100 0 12459000 9643300 6818100 5749900 0 6543 2104 5971 55072;55073;55074;55075;55076;55077;55078;55079;55080 43589;43590;43591;43592;43593;43594 43590 6 DAPVDHLGTEHCYDSSAPPK Unmodified 2194.9589 0.95894641 1988 P78549 NTHL1 Endonuclease III-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS 5 3.56 1 1 1 2 1 46.987 43.31 3 0.013964 49286 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 15.441 12.052 13615000 0 11285000 0 0 2329300 0 0 0 0 0 0 0 0 0 0 6544 1988 5972 55081;55082;55083 43595;43596 43596 2 DAQAEEEIK Unmodified 1031.4771 0.47711909 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.79 2.98 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 17.546 17.368 2 0.0035457 16480 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 126.41 70.401 183160000 13970000 0 0 9132500 6106200 14476000 10095000 9061900 9016700 16533000 15678000 23982000 15447000 15622000 24039000 6545 2431 5973 55084;55085;55086;55087;55088;55089;55090;55091;55092;55093;55094;55095;55096;55097 43597;43598;43599;43600;43601;43602;43603;43604;43605;43606;43607 43599 6 DAQDVQASQAEADQQQTR Unmodified 1987.8831 0.88313893 4817 Q9P2E9 RRBP1 Ribosome-binding protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 24.085 24.435 2 8.8961E-08 25853 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 87.18 81.334 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6546 4817 5974 55098 43608 43608 1 DAQEFGADVR Unmodified 1106.4993 0.49925152 441 O60885 BRD4 Bromodomain-containing protein 4 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 37.597 37.826 2 0.044814 41981 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 38.55 16.419 6668500 0 0 0 0 0 0 2377000 1255100 0 0 3036300 0 0 0 0 6547 441 5975 55099;55100;55101 43609 43609 1 DAQELYAAGENR Unmodified 1335.6055 0.6055075 1643 P50995 ANXA11 Annexin A11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.254 38.435 2 2.385E-05 42539 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 91.855 78.878 160370000 0 0 0 8501200 5821100 11789000 8872300 10287000 7155300 14443000 13178000 18997000 13973000 16370000 30987000 6548 1643 5976 55102;55103;55104;55105;55106;55107;55108;55109;55110;55111;55112;55113 43610;43611;43612;43613;43614;43615;43616;43617;43618;43619;43620;43621;43622 43611 13 DAQELYAAGENRLGTDESK Unmodified 2065.9552 0.95524124 1643 P50995 ANXA11 Annexin A11 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 56.007 56.09 3 2.7045E-08 63117 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.862 56.532 80394000 0 0 0 4383100 3575800 5192600 6854700 8236600 3076300 8388300 7556400 0 6725200 7117400 19288000 6549 1643 5977 55114;55115;55116;55117;55118;55119;55120;55121;55122;55123;55124 43623;43624;43625;43626;43627;43628;43629;43630;43631;43632 43626 10 DAQEQYNK Unmodified 994.43559 0.43558863 417 O60610 DIAPH1 Protein diaphanous homolog 1 yes yes 0 0 0 By MS/MS By MS/MS 1.67 0.471 1 2 2 1 39.817 39.347 2 0.012704 5279 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.997 67.707 41811000 30013000 11798000 0 0 0 0 0 0 0 0 0 0 0 0 0 6550 417 5978 55125;55126;55127 43633;43634 43633 2 DAQEVHCDEATK Unmodified 1401.5831 0.5830575 1475 P43251 BTD Biotinidase yes yes 0 0 0 By MS/MS 2 0 1 1 9.7404 6.4856 2 0.0011655 9274 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.156 91.261 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6551 1475 5979 55128 43635 43635 1 DAQGPDDAK Unmodified 915.39339 0.39338946 4633 Q9NTI5 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes yes 0 0 0 By MS/MS 1 0 1 1 106.2 111.46 2 0.044345 92103 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 78.113 29.939 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6552 4633 5980 55129 43636 43636 1 DAQGQPGLER Unmodified 1069.5152 0.51523593 242 O15027 SEC16A Protein transport protein Sec16A yes yes 0 0 0 By MS/MS 10 0 1 1 18.769 18.544 2 0.010746 18569 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 55.461 34.161 11127000 0 0 0 0 11127000 0 0 0 0 0 0 0 0 0 0 6553 242 5981 55130 43637 43637 1 DAQHYGGWEHR Unmodified 1354.5803 0.58029581 2441 Q14697 GANAB Neutral alpha-glucosidase AB yes yes 0 0 0 By MS/MS 10 0 1 1 21.715 22.367 3 0.039809 22294 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.195 27.162 15598000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15598000 6554 2441 5982 55131 43638 43638 1 DAQIAMMQQR Unmodified 1190.5536 0.55361205 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 3 2 1 43.185 43.928 2 0.012399 48561 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 70.747 56.59 8608100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8608100 6555 2459 5983 55132;55133;55134 43639;43640;43641 43640 3 DAQIFIQK Unmodified 961.52328 0.52328142 768 P04040 CAT Catalase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.768 48.926 2 0.0064531 54170 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 100.74 12.713 208020000 0 0 0 30366000 10733000 14976000 9590600 31264000 10895000 23069000 14256000 22156000 18657000 9477000 12583000 6556 768 5984 55135;55136;55137;55138;55139;55140;55141;55142;55143;55144;55145;55146 43642;43643;43644;43645;43646;43647;43648;43649;43650;43651;43652;43653;43654;43655 43651 14 DAQMRAAINQK Unmodified 1244.6296 0.62955418 4544 Q9NPA8 ENY2 Transcription and mRNA export factor ENY2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 24.059 19.507 2 0.0029855 27310 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 99.855 65.602 75696000 65732000 9964000 0 0 0 0 0 0 0 0 0 0 0 0 0 6557 4544 5985 55147;55148 43656 43656 1 DAQPSFSAEDIAK Unmodified 1377.6412 0.64122431 1183 P25205 MCM3 DNA replication licensing factor MCM3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.79 2.98 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 62.053 61.937 2 0.00084891 66404 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 87.568 76.738 437400000 86178000 0 0 19710000 14937000 25571000 27930000 22473000 17143000 33682000 44485000 36585000 24517000 35378000 48808000 6558 1183 5986 55149;55150;55151;55152;55153;55154;55155;55156;55157;55158;55159;55160;55161;55162 43657;43658;43659;43660;43661;43662;43663;43664;43665;43666;43667;43668;43669;43670 43659 13 DAQQDLNLDIEK Unmodified 1400.6783 0.6783381 1575 P49454 CENPF Centromere protein F yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 62.014 62.022 2 0.0059635 70841 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 64.82 40.598 10966000 0 0 0 0 1997300 0 0 0 0 0 4671800 0 4296500 0 0 6559 1575 5987 55163;55164;55165 43671 43671 1 DAQQVEPEGQEK Unmodified 1356.6157 0.61573784 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.358 14.52 2 1.618E-08 13806 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 161.17 101.27 512680000 0 0 0 23333000 28077000 35763000 25618000 39936000 28005000 54464000 57654000 64655000 49054000 39625000 66496000 6560 5216 5988 55166;55167;55168;55169;55170;55171;55172;55173;55174;55175;55176;55177 43672;43673;43674;43675;43676;43677;43678;43679;43680;43681;43682;43683 43681 12 DAQQVEPEGQEKPSPATVR Unmodified 2065.0076 0.0076111585 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 33.539 33.749 3 0.0010145 37078 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 43.946 34.416 55831000 0 0 0 4809500 7031800 0 5204900 3888400 0 3247200 7459000 12494000 3925400 3594900 4176500 6561 5216 5989 55178;55179;55180;55181;55182;55183;55184;55185;55186;55187 43684;43685;43686;43687;43688;43689;43690 43687 6 DAQTQLVGLHAK Unmodified 1279.6884 0.68844927 3964 Q96R06 SPAG5 Sperm-associated antigen 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 43.959 42.431 3 0.038187 46871 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 42.809 29.573 278420000 9418000 97961000 4718200 12189000 12105000 17269000 17022000 24083000 0 24465000 0 32346000 26846000 0 0 6562 3964 5990 55188;55189;55190;55191;55192;55193;55194;55195;55196;55197;55198 43691;43692;43693 43693 2 DAQVPIILAVNK Unmodified 1279.75 0.7499869 1501 P46199 MTIF2 Translation initiation factor IF-2, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 85.666 80.892 2 0.00077841 100540 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.087 79.936 15729000 0 15729000 0 0 0 0 0 0 0 0 0 0 0 0 0 6563 1501 5991 55199 43694 43694 1 DAQVVQVVLDGLSNILK Unmodified 1810.02 0.020013746 173 O00629 KPNA4 Importin subunit alpha-3 yes yes 0 0 0 By MS/MS 2 0 1 1 106.4 101.65 3 0.0012078 125487 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 55.437 51.335 4184800 0 4184800 0 0 0 0 0 0 0 0 0 0 0 0 0 6564 173 5992 55200 43695 43695 1 DARAKLMELEDALQK Unmodified 1729.9033 0.90326943 105 CON__Q8BGZ7 yes yes 0 0 2 By matching By matching By MS/MS 10 0 3 1 1 1 15.667 15.787 4 0.027748 15348 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 23.956 7.8567 + 9026900 0 0 0 0 0 3017400 0 0 1289800 0 0 0 4719700 0 0 6565 105 5993 55201;55202;55203 43696 43696 0 DARDCISWVGDEGEFK Unmodified 1882.8156 0.81557663 2128 Q06546 GABPA GA-binding protein alpha chain yes yes 0 0 1 By MS/MS 2 0 1 1 79.542 71.412 3 0.0036524 93790 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 39.338 31.806 14311000 14311000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6566 2128 5994 55204 43697 43697 1 DARHAAEGEIYTK Unmodified 1459.7056 0.7055559 3471 Q8TAG9 EXOC6 Exocyst complex component 6 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 27.914 23.575 3 0.026403 29774 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 36.944 33.847 14115000 2966100 0 11149000 0 0 0 0 0 0 0 0 0 0 0 0 6567 3471 5995 55205;55206 43698 43698 1 DARLPLSTTSNEACK Unmodified 1661.8043 0.80428367 2753 Q5R3I4 TTC38 Tetratricopeptide repeat protein 38 yes yes 0 0 1 By matching By MS/MS 2.33 0.471 2 1 1 2 48.754 42.612 3 0.00026101 53497 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 65.467 60.094 50550000 9407400 41143000 0 0 0 0 0 0 0 0 0 0 0 0 0 6568 2753 5996 55207;55208;55209 43699;43700;43701 43701 3 DARQVTSNSLSGTQEDGLDDPRLEK Unmodified 2730.3056 0.30564367 1284 P30533 LRPAP1 Alpha-2-macroglobulin receptor-associated protein yes yes 0 0 2 By MS/MS By MS/MS 2 0 4 2 2 60.476 54.447 3;4 6.5886E-55 73015 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 103.29 89.965 41921000 26846000 0 15076000 0 0 0 0 0 0 0 0 0 0 0 0 6569 1284 5997 55210;55211;55212;55213 43702;43703;43704;43705;43706;43707 43703 6 DARSPSPAHIVSNK Unmodified 1477.7637 0.76373948 4564 Q9NQB0 TCF7L2 Transcription factor 7-like 2 yes yes 0 0 1 By MS/MS 2 0 1 1 29.739 24.119 3 0.031805 34007 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 44.005 26.043 21540000 21540000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6570 4564 5998 55214 43708 43708 0 DASAAEPAAAER Unmodified 1157.5313 0.53127993 4908 Q9UHR6 ZNHIT2 Zinc finger HIT domain-containing protein 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 16.199 16.408 2 9.3088E-05 15437 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 88.496 73.558 68800000 0 0 0 0 3320200 5452800 4525800 3752400 5282600 5389400 7439000 6839400 9225200 6269600 11303000 6571 4908 5999 55215;55216;55217;55218;55219;55220;55221;55222;55223;55224;55225 43709;43710;43711;43712;43713;43714 43711 6 DASDDLDDLNFFNQK Unmodified 1755.7588 0.75877326 1099 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 6 3.76 4 4 7 4 4 1 1 1 1 1 1 1 88.309 85.742 2;3 2.7432E-66 106181 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 247.22 241.19 333510000 74853000 243310000 0 0 0 2268400 0 1168700 1554500 0 1949000 2456900 0 1250000 4697100 6572 1099 6000 55226;55227;55228;55229;55230;55231;55232;55233;55234;55235;55236;55237;55238;55239;55240 43715;43716;43717;43718;43719;43720;43721;43722;43723;43724;43725;43726 43716 11 DASESPGENCQHLLAR Unmodified 1782.7955 0.79550989 2753 Q5R3I4 TTC38 Tetratricopeptide repeat protein 38 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 37.809 38.41 3 0.00021436 41483 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.246 54.967 10436000 0 0 0 0 0 0 0 0 0 0 5219300 0 0 0 5216900 6573 2753 6001 55241;55242 43727 43727 1 DASFLAGGLFTDFMISVISEDDSIIK Unmodified 2790.3674 0.36736422 28 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 106.8 102.58 3 0.0064444 108146 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 28.434 25.994 4413500 3058600 1354800 0 0 0 0 0 0 0 0 0 0 0 0 0 6574 28 6002 55243;55244 43728 43728 0 DASGATFTWTPSSGK Unmodified 1511.6892 0.68923713 752 P01877 IGHA2 Ig alpha-2 chain C region yes yes 0 0 0 By MS/MS 10 0 1 1 64.159 64.295 2 0.0013045 73487 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 55.578 29.64 12207000 0 0 0 0 0 0 0 0 0 12207000 0 0 0 0 0 6575 752 6003 55245 43729;43730 43730 2 DASGQPIFNASAK Unmodified 1304.6361 0.63607935 265 O15226 NKRF NF-kappa-B-repressing factor yes yes 0 0 0 By MS/MS By MS/MS 10 0 3 1 2 44.322 44.431 2 0.0024326 50022 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 58.676 40.365 12171000 0 0 0 0 0 6696000 0 5474500 0 0 0 0 0 0 0 6576 265 6004 55246;55247;55248 43731;43732 43731 2 DASGVTFTWTPSSGK Unmodified 1539.7205 0.72053726 751 P01876 IGHA1 Ig alpha-1 chain C region yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 74.128 74.137 2 1.0149E-26 85362 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 127.17 112.48 130880000 0 0 0 7572300 3557900 4672100 3950300 10210000 0 72191000 10818000 8182200 9725200 0 0 6577 751 6005 55249;55250;55251;55252;55253;55254;55255;55256;55257 43733;43734;43735;43736;43737;43738;43739;43740 43734 8 DASIVGFFDDSFSEAHSEFLK Unmodified 2347.0645 0.064457335 1270 P30101 PDIA3 Protein disulfide-isomerase A3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.08 0.493 1 9 2 7 4 1 98.575 93.673 2;3;4 4.5393E-92 116704 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 161.22 154.86 5171300000 4587100000 569340000 14885000 0 0 0 0 0 0 0 0 0 0 0 0 6578 1270 6006 55258;55259;55260;55261;55262;55263;55264;55265;55266;55267;55268;55269 43741;43742;43743;43744;43745;43746;43747;43748;43749;43750;43751;43752;43753;43754;43755;43756;43757;43758;43759 43741 17 DASLMVTNDGATILK Oxidation (M) 1563.7814 0.78142296 1980 P78371 CCT2 T-complex protein 1 subunit beta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.083 71.157 2 7.2343E-27 81602 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 126.19 109.52 1063500000 0 0 0 39918000 60287000 103250000 84242000 51629000 53437000 115210000 121790000 133540000 82276000 80154000 137720000 6579 1980 6007 55270;55271;55272;55273;55274;55275;55276;55277;55278;55279;55280;55281 43760;43761;43762;43763;43764;43765;43766;43767;43768;43769;43770;43771;43772 43766 3191 13 DASLMVTNDGATILK Unmodified 1547.7865 0.78650834 1980 P78371 CCT2 T-complex protein 1 subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.656 77.714 2 1.1817E-49 89665 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 169.52 142.85 946380000 0 0 0 20387000 37739000 88176000 45679000 49806000 27602000 107500000 112780000 89670000 51475000 85495000 230060000 6580 1980 6007 55282;55283;55284;55285;55286;55287;55288;55289;55290;55291;55292;55293 43773;43774;43775;43776;43777;43778;43779;43780;43781;43782;43783;43784;43785 43774 13 DASLVTNEDHQR Unmodified 1383.6379 0.63787026 1575 P49454 CENPF Centromere protein F yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 21.132 21.455 2 2.3636E-05 21302 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 102.06 90.196 8990800 0 0 0 0 0 0 0 1074400 0 2475400 0 0 0 2355300 3085700 6581 1575 6008 55294;55295;55296;55297;55298 43786;43787;43788 43787 3 DASLVVTTSGDHK Unmodified 1328.6572 0.65720872 2341 Q13685 AAMP Angio-associated migratory cell protein yes yes 0 0 0 By MS/MS By MS/MS 5 3.56 1 1 1 2 1 33.361 30.496 2 1.0571E-06 33156 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.096 76.898 37395000 0 32747000 0 0 0 0 0 0 0 0 0 0 0 0 4647700 6582 2341 6009 55299;55300;55301 43789;43790;43791;43792 43790 4 DASMQDSDTFEIYDPRNPVNK Unmodified 2441.0805 0.080518105 2982 Q6UX04 CWC27 Peptidyl-prolyl cis-trans isomerase CWC27 homolog yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 78.198 71.745 3 2.2811E-09 91196 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.974 77.786 51466000 5051600 46414000 0 0 0 0 0 0 0 0 0 0 0 0 0 6583 2982 6010 55302;55303 43793;43794 43793 2 DASNWSTDK Unmodified 1022.4305 0.43050325 661 O95433 AHSA1 Activator of 90 kDa heat shock protein ATPase homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 17.942 18.13 2 0.013227 18565 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 60.118 37.627 55955000 0 0 0 2090700 2292400 8460300 4920800 3555000 1911700 6017400 4799000 5656200 3733200 5150200 7367600 6584 661 6011 55304;55305;55306;55307;55308;55309;55310;55311;55312;55313;55314;55315 43795;43796;43797 43795 3 DASRCSEQPSISDIK Unmodified 1691.7785 0.77846285 2411 Q14527 HLTF Helicase-like transcription factor yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 46.362 39.963 3 0.0017336 52438 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 63.062 56.178 47552000 8596200 38955000 0 0 0 0 0 0 0 0 0 0 0 0 0 6585 2411 6012 55316;55317 43798;43799 43798 1 DASSCQEQLDEFRK Unmodified 1711.7472 0.74716272 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 47.109 41.899 3 0.0030619 54543 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 56.29 50.819 20077000 0 20077000 0 0 0 0 0 0 0 0 0 0 0 0 0 6586 5049 6013 55318;55319 43800;43801 43800 2 DASSTYSQVENLNR Unmodified 1582.7223 0.72232817 4876 Q9UFC0 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 2 1 1 1 1 1 1 1 50.877 51.033 2 5.4874E-19 57204 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 161.67 145.42 70811000 0 0 0 0 16290000 0 0 0 0 23462000 0 0 12897000 0 18161000 6587 4876 6014 55320;55321;55322;55323;55324;55325;55326;55327;55328 43802;43803;43804;43805;43806;43807;43808;43809 43808 8 DASVPLIDVTNLPTPR Unmodified 1706.9203 0.9202997 3733 Q96A65 EXOC4 Exocyst complex component 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 88.96 89.031 2;3 0.00032601 103278 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 84.718 74.713 112550000 0 0 0 2824800 7526100 10198000 6126300 8997000 6758400 12993000 10642000 14253000 8442500 9148700 14641000 6588 3733 6015 55329;55330;55331;55332;55333;55334;55335;55336;55337;55338;55339;55340;55341;55342;55343;55344;55345;55346;55347;55348;55349;55350;55351;55352 43810;43811;43812;43813;43814;43815;43816;43817;43818;43819;43820;43821;43822;43823;43824;43825 43812 16 DASVPLIDVTNLPTPRK Unmodified 1835.0153 0.015262719 3733 Q96A65 EXOC4 Exocyst complex component 4 yes yes 0 0 1 By MS/MS By MS/MS By matching 6.25 3.77 1 1 2 2 1 1 84.725 82.806 3 0.0005891 95479 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 35.64 29.517 22413000 0 12490000 0 0 0 0 0 0 2597100 0 0 0 0 0 7326200 6589 3733 6016 55353;55354;55355;55356 43826;43827 43826 2 DASVQTVATEGDLLR Unmodified 1573.7948 0.79476484 3992 Q96SN8 CDK5RAP2 CDK5 regulatory subunit-associated protein 2 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching 10 0 5 1 1 1 1 1 72.996 73.091 2 0.0029108 84291 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 63.944 45.632 21971000 0 0 0 3090700 0 0 0 0 0 0 4269600 5209200 0 3993800 5407300 6590 3992 6017 55357;55358;55359;55360;55361 43828;43829 43828 2 DATEDLRK Unmodified 946.47197 0.47197413 2962 Q6PL24 TMED8 Protein TMED8 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 13.603 10.212 2 0.046305 12892 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 98.418 29.242 52403000 0 52403000 0 0 0 0 0 0 0 0 0 0 0 0 0 6591 2962 6018 55362;55363 43830 43830 1 DATIASLEETNR Unmodified 1318.6365 0.63647328 455 O75116 ROCK2 Rho-associated protein kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 52.104 52.33 2 0.0054986 59006 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 54.094 39.579 49234000 0 0 0 0 2705500 5365400 0 3127800 2536000 6633600 6514900 5580900 0 4333300 12437000 6592 455 6019 55364;55365;55366;55367;55368;55369;55370;55371;55372 43831;43832;43833;43834 43833 4 DATIASLEETNRTLTSDVANLANEK Unmodified 2675.325 0.32498213 455 O75116 ROCK2 Rho-associated protein kinase 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 92.203 87.52 3 1.1083E-133 109711 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 169.08 154.53 90138000 9678600 76973000 3486100 0 0 0 0 0 0 0 0 0 0 0 0 6593 455 6020 55373;55374;55375;55376 43835;43836;43837;43838;43839;43840 43835 6 DATLLIHEATLEDGLEEEAVEK Unmodified 2424.1908 0.19078006 4086 Q9BQ52 ELAC2 Zinc phosphodiesterase ELAC protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 3 1 1 89.211 84.117 3 1.7768E-94 103028 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 163.62 155.23 220640000 175330000 39728000 5582500 0 0 0 0 0 0 0 0 0 0 0 0 6594 4086 6021 55377;55378;55379;55380;55381 43841;43842;43843;43844;43845;43846 43842 6 DATLTALDRGQQQVFK Unmodified 1789.9323 0.93226137 1426 P40939 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 73.37 69.307 3 0.0091403 83601 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 42.568 42.568 29085000 0 26622000 2462900 0 0 0 0 0 0 0 0 0 0 0 0 6595 1426 6022 55382;55383;55384 43847;43848;43849 43848 3 DATMEVQR Unmodified 948.43348 0.43348014 1802 P58107 EPPK1 Epiplakin yes no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.713 19.916 2 0.011082 20363 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 77.741 40.647 114560000 0 0 0 9684700 8094300 9266700 8236000 7147200 7506000 8929800 13674000 13507000 10017000 7625400 10876000 6596 1802 6023 55385;55386;55387;55388;55389;55390;55391;55392;55393;55394;55395;55396 43850;43851;43852;43853;43854;43855;43856;43857 43855 8 DATNVAAAFEEAVR Unmodified 1462.7052 0.70522155 1648 P51151 RAB9A Ras-related protein Rab-9A yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 1 2 2 2 2 2 2 2 2 84.363 84.504 2;3 1.0594E-20 97946 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 144.1 123.96 136660000 0 0 0 0 0 5892600 6366900 11282000 3065400 21182000 23034000 21740000 10207000 10143000 23747000 6597 1648 6024 55397;55398;55399;55400;55401;55402;55403;55404;55405;55406;55407;55408;55409;55410;55411;55412;55413;55414 43858;43859;43860;43861;43862;43863;43864;43865 43862 7 DATNVAAAFEEAVRR Unmodified 1618.8063 0.80633258 1648 P51151 RAB9A Ras-related protein Rab-9A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 1 2 2 2 2 2 2 2 2 2 2 81.616 81.691 2;3 2.9478E-19 94517 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 83.692 41.375 393440000 0 0 0 5091400 10626000 30386000 15318000 37049000 31311000 37542000 38430000 47484000 20935000 33839000 85429000 6598 1648 6025 55415;55416;55417;55418;55419;55420;55421;55422;55423;55424;55425;55426;55427;55428;55429;55430;55431;55432;55433;55434;55435;55436;55437 43866;43867;43868;43869;43870;43871;43872;43873;43874;43875;43876;43877;43878 43872 12 DATNVGDEGGFAPNILENK Unmodified 1959.9174 0.91739917 827 P06733 ENO1 Alpha-enolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.92 3.91 3 9 3 24 7 7 1 2 2 2 2 2 2 2 2 2 2 2 2 80.097 78.595 2;3 4.9602E-147 93727 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 280.97 273.24 21724000000 1101200000 13797000000 12160000 379520000 44926000 52659000 45384000 52251000 24754000 86823000 890080000 996710000 69686000 879220000 3291700000 6599 827 6026 55438;55439;55440;55441;55442;55443;55444;55445;55446;55447;55448;55449;55450;55451;55452;55453;55454;55455;55456;55457;55458;55459;55460;55461;55462;55463;55464;55465;55466;55467;55468;55469;55470;55471;55472;55473;55474;55475;55476 43879;43880;43881;43882;43883;43884;43885;43886;43887;43888;43889;43890;43891;43892;43893;43894;43895;43896;43897;43898;43899;43900;43901;43902;43903;43904;43905;43906;43907;43908;43909;43910 43885 28 DATNVGDEGGFAPNILENNEALELLK Unmodified 2742.3348 0.33481854 991 P13929 ENO3 Beta-enolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.5 0.5 3 3 2 3 1 97.766 93.524 2;3 4.6889E-127 115694 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 165.65 159.58 659890000 126420000 521870000 11601000 0 0 0 0 0 0 0 0 0 0 0 0 6600 991 6027 55477;55478;55479;55480;55481;55482 43911;43912;43913;43914;43915;43916 43911 5 DATQITQGPR Unmodified 1085.5465 0.54653606 1315 P32004 L1CAM Neural cell adhesion molecule L1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 24.202 24.46 2 0.032759 25390 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 42.311 27.373 39311000 0 0 0 2684000 3256300 0 0 3775400 0 2540300 5020100 6392300 5546000 3814600 6282500 6601 1315 6028 55483;55484;55485;55486;55487;55488;55489;55490;55491 43917;43918 43918 2 DATSDLAIIAR Unmodified 1144.6088 0.60880197 3642 Q92620 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 73.005 72.986 2 0.00031834 83475 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.358 71.403 13373000 0 0 0 0 3018400 0 0 0 0 0 0 0 0 0 10354000 6602 3642 6029 55492;55493 43919;43920 43919 2 DATSDLAIIARK Unmodified 1272.7038 0.70376498 3642 Q92620 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 69.077 63.442 3 0.0025798 81157 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.64 71.696 47575000 4789000 33966000 8819900 0 0 0 0 0 0 0 0 0 0 0 0 6603 3642 6030 55494;55495;55496;55497 43921;43922;43923;43924 43921 4 DATVKDDALSLDGELWAGDK Unmodified 2118.0117 0.011693483 5362 yes yes 0 0 1 By MS/MS 10 0 1 1 45.986 46.15 3 0.019453 51920 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 19.68 11.08 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6604 5362 6031 55498 43925 43925 1 DATYYSYQNR Unmodified 1279.5469 0.54692999 2171 Q09472 EP300 Histone acetyltransferase p300 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.143 34.325 2 0.0017601 36811 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.819 72.279 92233000 0 0 0 6539900 7314700 6880200 7534400 7269500 6057400 7961100 7301800 10299000 8417000 5916500 10742000 6605 2171 6032 55499;55500;55501;55502;55503;55504;55505;55506;55507;55508;55509;55510 43926;43927;43928;43929;43930;43931;43932;43933;43934 43929 9 DAVDFLR Unmodified 834.42357 0.42356738 4423 Q9H6S3 EPS8L2 Epidermal growth factor receptor kinase substrate 8-like protein 2 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 63.028 63.101 2 0.029815 72215 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 75.311 30.7 34830000 0 0 0 0 3237200 8199100 6055600 0 0 0 0 0 0 6342900 10995000 6606 4423 6033 55511;55512;55513;55514;55515 43935 43935 1 DAVEDLESVGK Unmodified 1160.5561 0.55609769 1995 P81605 DCD Dermcidin;Survival-promoting peptide;DCD-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.8 2.86 3 17 1 2 2 3 1 1 1 1 1 1 2 1 1 2 57.467 57.235 2 0.00025931 68502 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 91.584 66.765 6913600000 285410 396420000 0 845970000 833810000 576500000 503830000 530800000 246880000 376930000 864460000 603580000 294350000 409580000 430180000 6607 1995 6034 55516;55517;55518;55519;55520;55521;55522;55523;55524;55525;55526;55527;55528;55529;55530;55531;55532;55533;55534;55535 43936;43937;43938;43939;43940;43941;43942;43943;43944;43945;43946;43947;43948;43949;43950;43951;43952;43953;43954;43955;43956;43957;43958;43959;43960;43961;43962 43947 26 DAVEQQGEVK Unmodified 1101.5302 0.5302173 4718 Q9NX58 LYAR Cell growth-regulating nucleolar protein yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 13.568 13.72 2 0.0021994 12916 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 85.666 37.797 47313000 0 0 0 5669200 0 0 3016600 6246000 7226700 10623000 4954900 0 9577300 0 0 6608 4718 6035 55536;55537;55538;55539;55540;55541;55542 43963;43964;43965 43963 3 DAVFIPAGWDNDK Unmodified 1446.6779 0.67794416 5282 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81.34 80.877 2 0.00069093 93590 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 79.659 62.821 172000000 0 105440000 2201200 2743000 1904800 5845500 2937600 4362900 4438800 6134800 6258800 6883000 5897000 4006600 12948000 6609 5282 6036 55543;55544;55545;55546;55547;55548;55549;55550;55551;55552;55553;55554;55555;55556 43966;43967;43968;43969;43970;43971;43972;43973;43974;43975;43976;43977 43973 11 DAVFIPAGWDNEK Unmodified 1460.6936 0.69359423 306 O43237 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 81.779 80.662 2 4.0515E-13 99343 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.9 95.456 438630000 12255000 244870000 1929500 7817600 8353600 14366000 10144000 13179000 9016200 11150000 19112000 18174000 11628000 13514000 43125000 6610 306 6037 55557;55558;55559;55560;55561;55562;55563;55564;55565;55566;55567;55568;55569;55570;55571;55572 43978;43979;43980;43981;43982;43983;43984;43985;43986;43987;43988;43989;43990;43991;43992;43993 43981 16 DAVIEFLLDK Unmodified 1161.6281 0.62814043 4240 Q9BY42 RTFDC1 Protein RTF2 homolog yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 96.31 92.295 2 0.0065063 114352 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.749 58.547 27146000 0 27146000 0 0 0 0 0 0 0 0 0 0 0 0 0 6611 4240 6038 55573;55574;55575 43994;43995 43994 2 DAVIQDLER Unmodified 1057.5404 0.54038805 3581 Q8WX93 PALLD Palladin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 55.243 55.412 2 0.005153 62670 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 81.972 50.898 54817000 0 0 0 7349200 0 0 8673300 0 5771300 9759800 0 10594000 0 0 12669000 6612 3581 6039 55576;55577;55578;55579;55580;55581 43996;43997;43998;43999 43996 4 DAVIQDLERK Unmodified 1185.6354 0.63535107 3581 Q8WX93 PALLD Palladin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.89 2.72 3 1 24 1 2 1 2 2 2 2 2 2 2 2 2 2 2 2 48.469 47.986 2;3 0.00033299 53191 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 107.15 66.125 997780000 15182000 18361000 8610300 55370000 41272000 57482000 71092000 47965000 56431000 91680000 93373000 80201000 80731000 90158000 189870000 6613 3581 6040 55582;55583;55584;55585;55586;55587;55588;55589;55590;55591;55592;55593;55594;55595;55596;55597;55598;55599;55600;55601;55602;55603;55604;55605;55606;55607;55608;55609 44000;44001;44002;44003;44004;44005;44006;44007;44008;44009;44010;44011;44012;44013;44014;44015;44016;44017;44018;44019;44020 44015 16 DAVITVPVFFNQAER Unmodified 1704.8835 0.88352026 5206 Q9Y4L1 HYOU1 Hypoxia up-regulated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 91.628 91.763 2 0.031291 106785 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 39.917 29.012 12527000 0 0 0 0 0 1319900 550150 917440 0 1826500 1293700 1472500 0 1339900 3807400 6614 5206 6041 55610;55611;55612;55613;55614;55615;55616;55617 44021 44021 1 DAVLCVECGYK Unmodified 1312.5792 0.5791581 1106 P20585 MSH3 DNA mismatch repair protein Msh3 yes yes 0 0 0 By MS/MS 2 0 1 1 59.697 53.854 2 0.013434 69333 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.643 58.436 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6615 1106 6042 55618 44022 44022 1 DAVLDFVK Unmodified 905.48583 0.48583328 3877 Q96II8 LRCH3 Leucine-rich repeat and calponin homology domain-containing protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.753 73.819 2 0.017693 85135 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 65.252 42.233 104580000 0 0 0 7126200 6375900 7564500 8228300 6866000 5275000 8952000 12223000 11827000 8751400 6660000 14733000 6616 3877 6043 55619;55620;55621;55622;55623;55624;55625;55626;55627;55628;55629;55630 44023;44024;44025;44026;44027;44028;44029;44030;44031;44032;44033 44023 11 DAVLLLFANK Unmodified 1102.6386 0.63864553 1071 P18085 ARF4 ADP-ribosylation factor 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 88.866 88.937 2 0.0014119 102858 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.318 68.427 31936000 0 0 0 1830800 1420600 4418700 2839900 2334900 1507200 2260300 2257100 3082500 1198200 2829200 5956200 6617 1071 6044 55631;55632;55633;55634;55635;55636;55637;55638;55639;55640;55641;55642 44034;44035;44036;44037;44038;44039;44040;44041;44042;44043;44044;44045 44037 12 DAVLLVFANK Unmodified 1088.623 0.62299547 2011;2012 P84077;P61204;P84085 ARF1;ARF3;ARF5 ADP-ribosylation factor 1;ADP-ribosylation factor 3;ADP-ribosylation factor 5 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 83.726 83.792 2 0.0014814 97165 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 92.439 60.505 105820000 0 0 0 6751700 5695600 0 11592000 5079000 9504600 15039000 10590000 13059000 0 10143000 18368000 6618 2011;2012 6045 55643;55644;55645;55646;55647;55648;55649;55650;55651;55652;55653 44046;44047;44048;44049;44050;44051;44052;44053;44054;44055;44056 44055 10 DAVPATLHLLPCEVAVDGPAPVGR Unmodified 2453.2737 0.27367902 3505 Q8TDP1 RNASEH2C Ribonuclease H2 subunit C yes yes 0 0 0 By MS/MS 10 0 1 1 87.322 87.48 3 8.8737E-09 101173 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.325 30.865 3378100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3378100 6619 3505 6046 55654 44057 44057 1 DAVQLETLELPPGCVR Unmodified 1795.9138 0.91383411 3744 Q96AY3 FKBP10 Peptidyl-prolyl cis-trans isomerase FKBP10 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 83.286 83.395 2 0.0012345 96602 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 68.44 59.486 9909500 0 0 0 0 0 2909000 0 0 0 0 0 0 0 0 7000400 6620 3744 6047 55655;55656 44058 44058 1 DAVRDGLRAVK Unmodified 1198.6782 0.67821894 1410 P40227 CCT6A T-complex protein 1 subunit zeta yes yes 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 38.623 32.858 3 0.031069 45412 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.338 18.569 338090000 322550000 15542000 0 0 0 0 0 0 0 0 0 0 0 0 0 6621 1410 6048 55657;55658 44059 44059 0 DAVSGMGVIVHIIEK Unmodified 1566.844 0.84396364 1588 P49720 PSMB3 Proteasome subunit beta type-3 yes yes 0 0 0 By MS/MS 10 0 1 1 89.718 89.861 3 0.015085 103987 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 21.093 18.897 5053300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5053300 6622 1588 6049 55659 44060 44060 1 DAVSNTTNQLESK Unmodified 1405.6685 0.66850169 3151 Q86UP2 KTN1 Kinectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 35.659 35.777 2 0.0013371 39238 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 78.655 55.336 9875000 0 0 0 3402100 0 0 0 0 0 0 4523800 0 1949100 0 0 6623 3151 6050 55660;55661;55662;55663 44061;44062 44062 2 DAVSPFSFSLLK Unmodified 1309.6918 0.69180331 3386 Q8NB46 ANKRD52 Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 92.908 93.045 2 0.0055376 108151 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 52.79 46.755 21504000 0 0 0 0 0 1893000 877350 1236000 1151400 3002800 1644800 0 1752000 1853100 8093500 6624 3386 6051 55664;55665;55666;55667;55668;55669;55670;55671;55672 44063;44064;44065;44066;44067 44064 3 DAVTPQER Unmodified 914.44576 0.44575938 5210 Q9Y4U1 MMACHC Methylmalonic aciduria and homocystinuria type C protein yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 11.159 11.285 2 0.025292 10144 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 58.815 22.114 6603800 0 0 0 1413600 1001100 0 0 0 0 0 1782600 2406600 0 0 0 6625 5210 6052 55673;55674;55675;55676 44068 44068 1 DAVTTTVTGAK Unmodified 1062.5557 0.55570376 4020 Q99541 PLIN2 Perilipin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.546 28.741 2 2.6586E-05 30856 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 120.31 94.569 343990000 0 0 0 17217000 24879000 23521000 28042000 24208000 20143000 32225000 37974000 46693000 29235000 27625000 32226000 6626 4020 6053 55677;55678;55679;55680;55681;55682;55683;55684;55685;55686;55687;55688 44069;44070;44071;44072;44073;44074;44075;44076;44077;44078;44079;44080;44081;44082;44083;44084;44085 44070 17 DAVTYTEHAK Unmodified 1133.5353 0.53530267 1910 P62805 HIST1H4A Histone H4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.384 16.564 2 0.00039245 16731 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 138.1 107.91 348660000 0 0 0 30833000 13457000 31342000 19256000 23734000 17554000 31813000 32264000 44927000 28788000 30031000 44660000 6627 1910 6054 55689;55690;55691;55692;55693;55694;55695;55696;55697;55698;55699;55700 44086;44087;44088;44089;44090;44091;44092;44093;44094;44095;44096 44096 11 DAVVQHSQLAAAVENLK Unmodified 1791.9479 0.94791144 419 O60645 EXOC3 Exocyst complex component 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.18 3.74 3 1 7 1 2 1 1 1 1 1 1 1 1 76.521 74.382 3 1.9467E-35 93271 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.49 118.09 125510000 7419100 60633000 16488000 3439300 4738600 0 0 11180000 8122300 0 0 13494000 0 0 0 6628 419 6055 55701;55702;55703;55704;55705;55706;55707;55708;55709;55710;55711 44097;44098;44099;44100;44101;44102;44103;44104;44105 44098 8 DAVVYPILVEFTR Unmodified 1520.8239 0.82388012 5206 Q9Y4L1 HYOU1 Hypoxia up-regulated protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 96.953 97.083 2 0.011367 112649 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.718 35.455 6969800 0 0 0 0 0 0 0 0 0 0 0 961970 0 784000 5223800 6629 5206 6056 55712;55713;55714 44106 44106 1 DAVYNAVGLAAYELFDSVDFDQWFK Unmodified 2882.3439 0.34392666 4919 Q9UI26 IPO11 Importin-11 yes yes 0 0 0 By MS/MS 2 0 1 1 105.97 97.835 3 0.0058879 125568 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 26.841 23.854 3804900 3804900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6630 4919 6057 55715 44107 44107 1 DAWQMTEEEYTPPAGAK Unmodified 1922.8356 0.83564337 2828 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 71.883 72.047 2 2.4039E-06 82373 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.466 74.95 18421000 0 0 0 0 0 3950600 0 0 0 0 0 0 2268500 3464200 8737700 6631 2828 6058 55716;55717;55718;55719 44108;44109;44110 44109 3 DAYERDLEADIIGDTSGHFQK Unmodified 2379.0979 0.097882729 857 P08133 ANXA6 Annexin A6 yes yes 0 0 1 By MS/MS 2 0 2 2 85.026 76.895 3;4 1.2193E-08 100395 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.047 66.715 32347000 32347000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6632 857 6059 55720;55721 44111;44112 44111 2 DAYLPLR Unmodified 846.45995 0.45995289 1234 P28340 POLD1 DNA polymerase delta catalytic subunit yes yes 0 0 0 By MS/MS 10 0 1 1 57.683 57.834 2 0.023669 65767 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 84.359 6.6103 20742000 0 0 0 0 0 0 0 0 0 20742000 0 0 0 0 0 6633 1234 6060 55722 44113 44113 1 DAYQVILDGVK Unmodified 1219.6449 0.64485312 4278 Q9BZZ5 API5 Apoptosis inhibitor 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80.188 79.723 2 2.3341E-05 92089 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 122.26 68.1 2685000000 0 1418700000 21096000 47193000 60549000 108790000 90834000 84715000 79101000 149370000 129870000 136210000 77362000 86982000 194140000 6634 4278 6061 55723;55724;55725;55726;55727;55728;55729;55730;55731;55732;55733;55734;55735;55736 44114;44115;44116;44117;44118;44119;44120;44121;44122;44123;44124;44125;44126;44127;44128 44118 14 DAYSGGAVNLYHVR Unmodified 1520.7372 0.73719038 1231 P28074 PSMB5 Proteasome subunit beta type-5 yes yes 0 0 0 By matching By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 56.705 56.927 2 1.5142E-26 63808 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 142.83 132.07 76229000 0 0 0 4685300 0 0 0 0 0 0 11206000 13658000 0 9851500 36829000 6635 1231 6062 55737;55738;55739;55740;55741 44129 44129 1 DAYSSFGSR Unmodified 988.42502 0.42502394 170 O00571;O15523 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 32.023 31.528 2 0.0050719 33419 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 84.498 84.498 538090000 0 51603000 0 27052000 35372000 37195000 37419000 28775000 28097000 46428000 50268000 63170000 40522000 30630000 61563000 6636 170 6063 55742;55743;55744;55745;55746;55747;55748;55749;55750;55751;55752;55753;55754;55755 44130;44131;44132;44133;44134;44135;44136;44137;44138;44139;44140;44141;44142;44143 44139 13 DAYSSFGSRSDSRGK Unmodified 1618.7336 0.73356156 170 O00571 DDX3X ATP-dependent RNA helicase DDX3X yes yes 0 0 2 By MS/MS 2 0 1 1 26.509 21.286 3 0.00027508 30052 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.717 86.341 51106000 51106000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6637 170 6064 55756 44144 44144 0 DCAVIVTQK Unmodified 1032.5274 0.52738052 1819 P60900 PSMA6 Proteasome subunit alpha type-6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.5 3.35 1 5 1 1 1 1 1 1 43.53 43.925 2 0.0082307 102315 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 90.709 70.712 103230000 0 22808000 0 7446700 0 0 0 0 0 0 12768000 0 4107300 16503000 39602000 6638 1819 6065 55757;55758;55759;55760;55761;55762 44145;44146 44145 2 DCDPQVVEEIRQANK Unmodified 1799.8472 0.84721111 4214 Q9BWT6 MND1 Meiotic nuclear division protein 1 homolog yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 61.97 56.631 3 0.045148 69537 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 23.138 18.92 23535000 0 23535000 0 0 0 0 0 0 0 0 0 0 0 0 0 6639 4214 6066 55763;55764 44147 44147 1 DCDPTTGETDDEGYEDEYVLEDLEVTVADHIQK Unmodified 3799.6054 0.60543483 5267 Q9Y678 COPG1 Coatomer subunit gamma-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 2 1 1 99.043 94.344 3 1.6863E-132 117628 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 143.61 143.47 137920000 91775000 43144000 3006200 0 0 0 0 0 0 0 0 0 0 0 0 6640 5267 6067 55765;55766;55767;55768 44148;44149;44150;44151;44152;44153;44154 44152 7 DCEAEVRAAAAHK Unmodified 1426.6623 0.66231088 1272 P30154 PPP2R1B Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform yes yes 0 0 1 By MS/MS 2 0 1 1 28.354 25.247 3 0.034752 32050 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 33.782 22.463 7173100 0 0 7173100 0 0 0 0 0 0 0 0 0 0 0 0 6641 1272 6068 55769 44155 44155 1 DCEAEVRAAASHK Unmodified 1442.6572 0.6572255 1271 P30153 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes yes 0 0 1 By MS/MS 2 0 1 1 27.394 24.337 3 0.020365 30946 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 52.79 43.786 151890000 0 0 151890000 0 0 0 0 0 0 0 0 0 0 0 0 6642 1271 6069 55770 44156 44156 0 DCEAYALQMTK Unmodified 1328.5741 0.57407272 1451 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 56.059 56.26 2 0.0027921 62999 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 66.056 55.769 38983000 0 0 0 0 2139600 4816700 2364400 0 0 3867100 4380400 7466500 0 5175200 8773000 6643 1451 6070 55771;55772;55773;55774;55775;55776;55777;55778;55779 44157;44158;44159;44160;44161 44161 5 DCEDPEYKPLQGPPK Unmodified 1771.8087 0.80870034 4517 Q9HCK8 CHD8 Chromodomain-helicase-DNA-binding protein 8 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 44.054 44.45 3 0.00077442 48844 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.885 46.97 24132000 0 0 0 0 0 9393400 0 0 0 0 0 0 0 0 14739000 6644 4517 6071 55780;55781 44162 44162 1 DCEDPNPLIR Unmodified 1227.5554 0.55538619 2178;1937 P63010;Q10567 AP2B1;AP1B1 AP-2 complex subunit beta;AP-1 complex subunit beta-1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.315 49.473 2 0.0018135 55732 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 101.43 89.384 296470000 0 0 0 17123000 19850000 27598000 23028000 18389000 13073000 32647000 23639000 33563000 24878000 23982000 38697000 6645 1937;2178 6072 55782;55783;55784;55785;55786;55787;55788;55789;55790;55791;55792;55793 44163;44164;44165;44166;44167;44168;44169;44170;44171 44164 9 DCEECIQLEPTFIK Unmodified 1780.8012 0.80117212 1313 P31948 STIP1 Stress-induced-phosphoprotein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 1 4 1 84.747 80.32 2;3 1.8025E-23 100048 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 160.67 154.67 1602500000 53736000 1546900000 1837900 0 0 0 0 0 0 0 0 0 0 0 0 6646 1313 6073 55794;55795;55796;55797;55798;55799 44172;44173;44174;44175;44176;44177 44173 3 DCEIDAEEK Unmodified 1107.439 0.43901903 1575 P49454 CENPF Centromere protein F yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 18.406 18.622 2 0.012702 19276 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 60.91 42.925 9918500 0 0 0 783880 867400 1228300 0 0 0 958070 942740 1727200 0 982550 2428300 6647 1575 6074 55800;55801;55802;55803;55804;55805;55806;55807 44178;44179;44180 44178 3 DCELENQEAHEQDGNDELK Unmodified 2271.9186 0.91859773 4697 Q9NWH9 SLTM SAFB-like transcription modulator yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.321 36.502 3 0.00013701 40722 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 55.437 52.54 105820000 0 0 0 7373000 8385500 11218000 12304000 4859000 8987100 11651000 5534000 8563000 7026800 8122900 11796000 6648 4697 6075 55808;55809;55810;55811;55812;55813;55814;55815;55816;55817;55818;55819 44181;44182;44183;44184;44185;44186;44187;44188;44189;44190;44191;44192;44193 44193 13 DCEVVMMIGLPGAGK 2 Oxidation (M) 1607.7357 0.73573509 2046 Q00839 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.22 1 2 1 16 3 1 2 1 1 1 2 1 2 2 1 1 1 1 75.521 74.975 2;3 2.8571E-23 84598 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 119.27 112.26 1368500000 27588000 100740000 0 67798000 112630000 75613000 58858000 74974000 108440000 106320000 112240000 157390000 160520000 100940000 104490000 6649 2046 6076 55820;55821;55822;55823;55824;55825;55826;55827;55828;55829;55830;55831;55832;55833;55834;55835;55836;55837;55838;55839 44194;44195;44196;44197;44198;44199;44200;44201;44202;44203;44204;44205;44206 44195 3308;3309 12 DCEVVMMIGLPGAGK Oxidation (M) 1591.7408 0.74082047 2046 Q00839 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.77 3.49 6 3 22 2 5 2 1 1 2 2 2 2 2 2 2 2 2 2 83.24 82.102 2;3 7.488E-27 95120 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 125.74 118.81 1452400000 23469000 539480000 5536300 13077000 17413000 61790000 35741000 41413000 69514000 98901000 92791000 140740000 84105000 96159000 132230000 6650 2046 6076 55840;55841;55842;55843;55844;55845;55846;55847;55848;55849;55850;55851;55852;55853;55854;55855;55856;55857;55858;55859;55860;55861;55862;55863;55864;55865;55866;55867;55868;55869;55870 44207;44208;44209;44210;44211;44212;44213;44214;44215;44216;44217;44218;44219;44220;44221;44222;44223;44224;44225;44226;44227;44228;44229;44230;44231;44232;44233;44234;44235;44236;44237 44227 3308;3309 30 DCEVVMMIGLPGAGK Unmodified 1575.7459 0.74590585 2046 Q00839 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 88.809 87.756 2 7.3403E-10 101780 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 114.83 108.99 268050000 32130000 87356000 2275100 1736500 6209400 7879100 3813100 7629500 9876200 19255000 18519000 20871000 0 14624000 35874000 6651 2046 6076 55871;55872;55873;55874;55875;55876;55877;55878;55879;55880;55881;55882;55883;55884;55885 44238;44239;44240;44241;44242;44243;44244;44245;44246;44247;44248;44249;44250;44251 44243 14 DCFGLYGEPSEGTTGQAESSCHPGEQK Unmodified 2927.1974 0.19741513 2551 Q15596 NCOA2 Nuclear receptor coactivator 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching 7.86 3.4 1 1 5 2 1 1 1 1 1 59.637 58.366 3 2.7588E-11 73866 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.035 71.164 40977000 0 20162000 0 0 0 0 3060200 0 0 4449300 3534500 3879700 0 0 5891400 6652 2551 6077 55886;55887;55888;55889;55890;55891;55892 44252;44253;44254 44253 3 DCGATWVVLGHSER Unmodified 1585.7307 0.73072479 1808 P60174 TPI1 Triosephosphate isomerase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 2 1 2 65.946 66.2 2;3 0.00041386 74982 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.176 59.31 227970000 0 0 0 7293000 0 0 0 0 0 0 25459000 52179000 0 19792000 123240000 6653 1808 6078 55893;55894;55895;55896;55897;55898;55899 44255;44256;44257;44258;44259 44256 4 DCGATWVVLGHSERR Unmodified 1741.8318 0.83183582 1808 P60174 TPI1 Triosephosphate isomerase yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 56.773 57.363 3 3.3015E-06 64896 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.632 76.283 30446000 0 0 0 0 0 0 0 0 0 0 0 8496600 0 0 21949000 6654 1808 6079 55900;55901 44260;44261;44262 44261 3 DCGEWAIPGGMVDPGEK Oxidation (M) 1832.7709 0.77093463 4206 Q9BW91 NUDT9 ADP-ribose pyrophosphatase, mitochondrial yes yes 0 1 0 By MS/MS 2 0 1 1 76.103 71.265 2 0.0042174 88955 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 54.023 47.99 16651000 0 16651000 0 0 0 0 0 0 0 0 0 0 0 0 0 6655 4206 6080 55902 44263 44263 5682 1 DCGGAAQLAGPAAEADPLGR Unmodified 1895.8796 0.87957387 5215 Q9Y508 RNF114 E3 ubiquitin-protein ligase RNF114 yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 71.974 72.2 2 8.4367E-09 82139 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 72.898 59.697 42444000 0 0 0 0 0 0 0 0 0 6372200 8537400 8786800 2801600 5421400 10524000 6656 5215 6081 55903;55904;55905;55906;55907;55908 44264;44265;44266 44266 3 DCGNQAVEER Unmodified 1176.4829 0.48294953 4618 Q9NS73 MBIP MAP3K12-binding inhibitory protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 10.145 10.34 2 0.0021904 7427 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 85.731 76.868 17357000 0 0 0 0 0 2043300 1211200 757920 0 1766700 3272300 4839600 1722400 0 1744000 6657 4618 6082 55909;55910;55911;55912;55913;55914;55915;55916 44267;44268;44269;44270;44271;44272 44270 6 DCGSVDGVIK Unmodified 1048.4859 0.48590964 1860 P61916 NPC2 Epididymal secretory protein E1 yes yes 0 0 0 By MS/MS 10 0 1 1 36.781 36.312 2 0.029134 40527 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 43.442 28.061 11764000 0 0 0 11764000 0 0 0 0 0 0 0 0 0 0 0 6658 1860 6083 55917 44273 44273 1 DCGSVSTVDEFPEAR Unmodified 1667.7097 0.70971458 2063 Q01804 OTUD4 OTU domain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 59.348 59.515 2 3.2952E-28 67209 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 141.73 132.04 44226000 0 0 0 0 3136000 3571600 0 0 5301300 4400800 0 6333200 6135600 4904600 10443000 6659 2063 6084 55918;55919;55920;55921;55922;55923;55924;55925;55926;55927 44274;44275;44276;44277;44278;44279;44280;44281;44282;44283;44284 44278 10 DCGTSVPQGLLK Unmodified 1273.6336 0.63363651 4468 Q9H9A6 LRRC40 Leucine-rich repeat-containing protein 40 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 61.065 61.161 2 0.0021831 70109 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 63.816 41.076 80251000 0 0 0 5748100 4357700 5795200 5447800 8327700 0 7621100 8070600 9701700 10186000 6958600 8036400 6660 4468 6085 55928;55929;55930;55931;55932;55933;55934;55935;55936;55937;55938 44285;44286;44287;44288;44289;44290;44291;44292;44293;44294;44295 44295 11 DCHEEVYAGSHQYPGR Unmodified 1903.7908 0.79075887 4382 Q9H3P7 ACBD3 Golgi resident protein GCP60 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 2 1 1 2 2 2 2 2 2 2 30.211 30.453 3;4 2.0278E-10 32687 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 92.8 82.743 176840000 0 0 0 7496800 2294500 11404000 9462700 0 0 23051000 24727000 19366000 21061000 18401000 39570000 6661 4382 6086 55939;55940;55941;55942;55943;55944;55945;55946;55947;55948;55949;55950;55951;55952;55953;55954;55955;55956 44296;44297;44298;44299;44300;44301;44302;44303;44304;44305;44306;44307;44308;44309;44310;44311 44309 15 DCHLAQVPSHTVVAR Unmodified 1688.8417 0.84167222 763 P02787 TF Serotransferrin yes yes 0 0 0 By MS/MS 10 0 1 1 42.631 42.103 4 0.0016339 47438 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 31.614 26.724 20059000 0 0 0 20059000 0 0 0 0 0 0 0 0 0 0 0 6662 763 6087 55957 44312 44312 1 DCIFPYAFK Unmodified 1159.5372 0.53721693 895 P09884 POLA1 DNA polymerase alpha catalytic subunit yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 83.168 83.283 2 0.048871 96496 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 42.396 25.103 11608000 0 0 0 0 0 1916700 0 0 1863700 0 0 4988500 0 2838700 0 6663 895 6088 55958;55959;55960;55961 44313 44313 1 DCIQYIK Unmodified 938.45315 0.45315295 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 40.107 40.21 2 0.03046 43598 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 74.717 7.7239 39356000 0 0 0 3019900 2948000 3870900 3136900 2549400 0 5713700 5748500 0 0 3727500 8640800 6664 2431 6089 55962;55963;55964;55965;55966;55967;55968;55969;55970 44314 44314 1 DCISWVGDEGEFK Unmodified 1540.6504 0.65040879 2128 Q06546 GABPA GA-binding protein alpha chain yes yes 0 0 0 By MS/MS By matching By matching By MS/MS 10 0 4 1 1 1 1 76.75 76.897 2 0.015716 88289 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.836 55.949 14318000 0 0 0 0 0 2427000 0 0 0 3161500 2923100 0 0 0 5806800 6665 2128 6090 55971;55972;55973;55974 44315;44316 44316 0 DCLADVDTK Unmodified 1035.4543 0.45427516 3443;3879 Q8NFC6;Q96IK1 BOD1L1;BOD1 Biorientation of chromosomes in cell division protein 1-like 1;Biorientation of chromosomes in cell division protein 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.461 30.65 2 0.0081922 32882 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 70.332 65.101 130500000 0 0 0 6194600 7699300 9029700 7645200 7697500 7808700 8580100 10782000 24747000 14405000 12187000 13728000 6666 3443;3879 6091 55975;55976;55977;55978;55979;55980;55981;55982;55983;55984;55985;55986 44317;44318;44319 44319 3 DCLADVDTKPAYQNLR Unmodified 1877.8942 0.89416131 3443;3879 Q8NFC6;Q96IK1 BOD1L1;BOD1 Biorientation of chromosomes in cell division protein 1-like 1;Biorientation of chromosomes in cell division protein 1 no no 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 59.053 59.332 3 0.012579 67531 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 47.037 40.421 17278000 0 0 0 0 0 0 4638400 0 0 0 0 7819200 4820700 0 0 6667 3443;3879 6092 55987;55988;55989 44320;44321 44320 2 DCLHGIEAK Unmodified 1041.4913 0.49132937 3357 Q8N684 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 yes yes 0 0 0 By matching By matching By MS/MS By matching By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 25.311 25.54 2 0.0077155 26750 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 71.692 41.08 61008000 0 0 0 15838000 0 3301600 0 0 7099600 3894500 5950800 13610000 11313000 0 0 6668 3357 6093 55990;55991;55992;55993;55994;55995;55996 44322;44323 44323 2 DCLIGSGQR Unmodified 1004.4709 0.47092828 4593 Q9NR50 EIF2B3 Translation initiation factor eIF-2B subunit gamma yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 27.129 27.33 2 0.0097334 28049 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 65.88 22.065 64787000 0 0 0 5364700 3270600 5520500 3960400 0 4518100 4629500 6780100 7199800 9326800 7060000 7156400 6669 4593 6094 55997;55998;55999;56000;56001;56002;56003;56004;56005;56006;56007 44324;44325;44326;44327 44325 4 DCLIGSGQRIEAK Unmodified 1445.7297 0.72966216 4593 Q9NR50 EIF2B3 Translation initiation factor eIF-2B subunit gamma yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 46.32 41.631 3 0.0075352 52222 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 38.674 31.218 25312000 0 17802000 7510900 0 0 0 0 0 0 0 0 0 0 0 0 6670 4593 6095 56008;56009 44328;44329 44329 2 DCLINAAK Unmodified 903.4484 0.44840192 1067 P17987 TCP1 T-complex protein 1 subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching 10 0 7 1 1 1 1 1 1 1 32.7 32.921 2 0.022888 35997 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 60.788 34.679 79629000 0 0 0 0 5281800 11272000 7487700 0 0 11973000 0 14742000 9042000 0 19831000 6671 1067 6096 56010;56011;56012;56013;56014;56015;56016 44330;44331 44331 2 DCLNVLNK Unmodified 974.48552 0.48551571 4013 Q99471 PFDN5 Prefoldin subunit 5 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.7 3.52 2 1 7 2 1 1 1 1 1 1 1 1 45.902 44.549 2 0.0067232 49327 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 98.457 58.811 590910000 0 479090000 1267100 8055900 6058000 0 0 0 0 8867500 27388000 22309000 11894000 25975000 0 6672 4013 6097 56017;56018;56019;56020;56021;56022;56023;56024;56025;56026 44332;44333;44334;44335;44336;44337;44338;44339;44340 44337 8 DCLQFIDQLSVPEEK Unmodified 1819.8662 0.86621522 4656 Q9NUY8 TBC1D23 TBC1 domain family member 23 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 90.402 86.349 2 0.017959 103620 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 57.019 44.403 85394000 0 85394000 0 0 0 0 0 0 0 0 0 0 0 0 0 6673 4656 6098 56027;56028 44341 44341 1 DCLYEVFDDLESK Unmodified 1631.7025 0.70250394 4082 Q9BPY3 FAM118B Protein FAM118B yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 93.637 87.124 2 0.0036819 110756 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.896 48.842 22207000 4921800 17285000 0 0 0 0 0 0 0 0 0 0 0 0 0 6674 4082 6099 56029;56030 44342;44343 44343 2 DCMRELDDTR Unmodified 1309.5391 0.5390842 1356 P35579 MYH9 Myosin-9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 28.274 28.469 2;3 0.0015424 30525 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 143.96 118.4 1822000000 0 0 0 98752000 83067000 142070000 112110000 65113000 127790000 165910000 243960000 229860000 194540000 138320000 220520000 6675 1356 6100 56031;56032;56033;56034;56035;56036;56037;56038;56039;56040;56041;56042;56043;56044;56045;56046;56047;56048;56049;56050;56051;56052;56053;56054 44344;44345;44346;44347;44348;44349;44350;44351;44352;44353;44354;44355;44356;44357;44358;44359;44360 44352 7 DCMRELDDTR Oxidation (M) 1325.534 0.53399882 1356 P35579 MYH9 Myosin-9 yes yes 0 1 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching 10 0 20 1 2 2 2 2 2 1 2 1 2 2 1 14.471 14.62 2;3 0.0078816 13210 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 79.659 76.337 1010800000 0 0 0 17563000 87614000 135110000 89326000 50864000 95729000 30465000 144800000 40010000 169830000 125290000 24176000 6676 1356 6100 56055;56056;56057;56058;56059;56060;56061;56062;56063;56064;56065;56066;56067;56068;56069;56070;56071;56072;56073;56074 44361;44362;44363;44364;44365;44366;44367;44368 44365 2069 0 DCPDSAEEYER Unmodified 1369.5092 0.50922386 3050 Q7L576 CYFIP1 Cytoplasmic FMR1-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 24.423 24.713 2 0.0019298 25241 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.056 67.658 36622000 0 0 0 0 4580600 4414900 0 0 0 3358800 3888000 6337300 2972800 4806300 6263000 6677 3050 6101 56075;56076;56077;56078;56079;56080;56081;56082 44369;44370;44371;44372;44373;44374;44375 44371 7 DCPDSAEEYERATRYNYTSEEK Unmodified 2712.1246 0.12456776 3050 Q7L576 CYFIP1 Cytoplasmic FMR1-interacting protein 1 yes yes 0 0 2 By MS/MS 2 0 1 1 55.94 47.793 4 0.0026251 65452 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 36.246 35.284 15140000 15140000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6678 3050 6102 56083 44376;44377 44377 2 DCPLQFHDFK Unmodified 1305.5812 0.58120701 512 O75528 TADA3 Transcriptional adapter 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 62.285 61.88 3 0.01586 69719 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 35.71 32.037 75878000 0 12941000 0 2810200 4302800 4471700 3675400 3534700 0 6018600 6234900 12889000 4464900 4363500 10171000 6679 512 6103 56084;56085;56086;56087;56088;56089;56090;56091;56092;56093;56094;56095 44378;44379;44380;44381;44382 44380 5 DCPTGHLTVDEFKK Unmodified 1645.777 0.77700628 1388 P37235 HPCAL1 Hippocalcin-like protein 1 yes yes 0 0 1 By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 47.786 48.046 3 0.0014004 53685 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 45.863 42.816 37721000 0 0 0 0 2689600 2527500 0 3007600 0 4664800 4154700 8352300 4283900 2670400 5370500 6680 1388 6104 56096;56097;56098;56099;56100;56101;56102;56103;56104 44383;44384 44383 2 DCRYALYDASFETK Unmodified 1737.7668 0.76683553 1822 P60981 DSTN Destrin yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 72.786 66.425 3 0.0016172 87379 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.08 56.996 132690000 89795000 42896000 0 0 0 0 0 0 0 0 0 0 0 0 0 6681 1822 6105 56105;56106 44385;44386 44386 1 DCRYALYDATYETK Unmodified 1767.7774 0.77740021 1165 P23528 CFL1 Cofilin-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.14 0.515 1 10 3 6 6 2 65.534 60.354 2;3 8.911E-45 73390 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 208.27 182.15 3962800000 703880000 3014900000 243950000 0 0 0 0 0 0 0 0 0 0 0 0 6682 1165 6106 56107;56108;56109;56110;56111;56112;56113;56114;56115;56116;56117;56118;56119;56120 44387;44388;44389;44390;44391;44392;44393;44394;44395;44396;44397;44398;44399;44400;44401;44402;44403;44404;44405;44406;44407;44408;44409;44410;44411 44393 23 DCTQAILLDGSYSK Unmodified 1569.7345 0.73447277 4425 Q9H6T3 RPAP3 RNA polymerase II-associated protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 69.207 68.854 2 1.3553E-29 84871 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 176.18 165.66 101720000 0 45858000 0 2632300 2129900 4119900 3819300 3352400 2655400 4605000 7019400 4496400 3736300 5405600 11891000 6683 4425 6107 56121;56122;56123;56124;56125;56126;56127;56128;56129;56130;56131;56132;56133 44412;44413;44414;44415;44416;44417;44418;44419;44420;44421;44422;44423;44424;44425 44416 14 DCVDIEVFPAGENTEDQK Unmodified 2064.8946 0.89461482 2661 Q32MZ4 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 76.692 74.992 2 8.021E-20 93428 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 141.46 137.29 61912000 12219000 20298000 0 0 0 0 0 0 0 0 4724800 8268100 2086500 4109600 10206000 6684 2661 6108 56134;56135;56136;56137;56138;56139;56140 44426;44427;44428;44429 44428 3 DCVGPEVEK Unmodified 1031.4594 0.45936054 733 P00558 PGK1 Phosphoglycerate kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.22 3.94 2 4 12 4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32.548 32.314 2 0.0073568 92829 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 93.162 77.53 2083700000 1298800000 286240000 8429900 8835200 4504900 5804100 4246100 4085800 4454800 5590600 82673000 91053000 10647000 69077000 199280000 6685 733 6109 56141;56142;56143;56144;56145;56146;56147;56148;56149;56150;56151;56152;56153;56154;56155;56156;56157;56158 44430;44431;44432;44433;44434;44435;44436;44437;44438;44439;44440 44433 11 DCYPAVQK Unmodified 979.44332 0.44331654 2457 Q14974 KPNB1 Importin subunit beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 23.665 23.905 2 0.034341 24467 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 53.163 28.312 71702000 0 0 0 0 2202000 5316400 2414500 2022900 3258100 4771100 7488600 11928000 7054800 6289200 18957000 6686 2457 6110 56159;56160;56161;56162;56163;56164;56165;56166;56167;56168;56169 44441;44442 44442 2 DDAEIHVPEEQAAR Unmodified 1578.7274 0.72741355 2830 Q5VZ89 DENND4C DENN domain-containing protein 4C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching 10 0 7 2 1 1 2 1 43.814 43.8 2;3 0.00099765 49322 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 53.869 39.307 58478000 0 0 0 13826000 12349000 0 4500000 0 0 0 0 0 14500000 0 13302000 6687 2830 6111 56170;56171;56172;56173;56174;56175;56176 44443;44444;44445 44445 3 DDAEIHVPEEQAARELITK Unmodified 2163.0808 0.080776102 2830 Q5VZ89 DENND4C DENN domain-containing protein 4C yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 77.849 72.402 3 0.00015725 93216 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.477 45.712 13987000 11583000 0 2404100 0 0 0 0 0 0 0 0 0 0 0 0 6688 2830 6112 56177;56178 44446;44447;44448 44446 3 DDAEVERLTCEEEEEK Unmodified 1979.8266 0.82659483 1656;1655 P51532;P51531 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.18 3.29 3 1 13 2 2 1 1 2 1 1 1 2 1 1 1 1 51.22 48.836 2;3 2.0418E-12 54979 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.23 70.887 210840000 43249000 48922000 0 0 12210000 0 9912600 15455000 18117000 15595000 20801000 0 0 26584000 0 6689 1656;1655 6113 56179;56180;56181;56182;56183;56184;56185;56186;56187;56188;56189;56190;56191;56192;56193;56194;56195 44449;44450;44451;44452;44453;44454;44455;44456;44457;44458;44459;44460;44461;44462;44463;44464;44465;44466 44454 17 DDAGWSPLHIAASAGRDEIVK Unmodified 2207.0971 0.097094868 549 O75832 PSMD10 26S proteasome non-ATPase regulatory subunit 10 yes yes 0 0 1 By MS/MS 2 0 1 1 86.197 78.066 3 0.00056766 101698 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 39.288 27.982 22479000 22479000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6690 549 6114 56196 44467 44467 1 DDAIVCNIGHFDVEIDVK Unmodified 2057.9728 0.97280556 1164 P23526 AHCY Adenosylhomocysteinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.29 0.452 10 4 8 4 2 94.935 89.643 3 5.1925E-71 89548 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 162.4 158.68 222460000 166270000 48123000 8073100 0 0 0 0 0 0 0 0 0 0 0 0 6691 1164 6115 56197;56198;56199;56200;56201;56202;56203;56204;56205;56206;56207;56208;56209;56210 44468;44469;44470;44471;44472;44473;44474;44475;44476;44477;44478;44479;44480;44481;44482;44483;44484;44485;44486 44470 19 DDALSFVPSQK Unmodified 1205.5928 0.59281755 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 66.597 65.918 2 0.0017501 81482 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.624 60.11 193200000 0 74948000 0 6253100 6323700 11308000 5923100 7322400 6422000 10714000 14610000 13346000 10229000 8754800 17043000 6692 2193 6116 56211;56212;56213;56214;56215;56216;56217;56218;56219;56220;56221;56222;56223;56224 44487;44488;44489;44490;44491;44492;44493 44489 7 DDAMAAVPAK Unmodified 987.46953 0.46953129 417 O60610 DIAPH1 Protein diaphanous homolog 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32.214 31.589 2 0.0027296 35326 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 80.684 69.992 296190000 10446000 12443000 0 19204000 16559000 22455000 22079000 17902000 15314000 26405000 32054000 30478000 22898000 18060000 29890000 6693 417 6117 56225;56226;56227;56228;56229;56230;56231;56232;56233;56234;56235;56236;56237;56238 44494;44495;44496;44497;44498;44499;44500;44501;44502;44503;44504;44505;44506;44507;44508 44494 15 DDAMAAVPAK Oxidation (M) 1003.4644 0.46444592 417 O60610 DIAPH1 Protein diaphanous homolog 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.25 2.49 1 11 1 1 1 1 1 1 1 1 1 1 1 1 24.831 25.413 2 0.0018695 16819 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 79.596 42.836 219950000 54570000 0 0 12223000 10368000 18426000 14578000 10328000 11035000 14971000 14383000 26714000 17637000 14721000 0 6694 417 6117 56239;56240;56241;56242;56243;56244;56245;56246;56247;56248;56249;56250 44509;44510;44511;44512;44513;44514;44515;44516;44517;44518 44513 518 8 DDAMLLK Oxidation (M) 820.40005 0.40005474 930 P10809 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.36 2.17 2 23 1 1 2 2 2 2 2 2 2 2 2 2 2 1 29.98 29.724 2 0.011463 33226 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 114.02 91.401 1455900000 51827000 281020000 0 99496000 69535000 95872000 106010000 36669000 74973000 107570000 110360000 131980000 135270000 95416000 59926000 6695 930 6118 56251;56252;56253;56254;56255;56256;56257;56258;56259;56260;56261;56262;56263;56264;56265;56266;56267;56268;56269;56270;56271;56272;56273;56274;56275 44519;44520;44521;44522;44523;44524;44525;44526;44527;44528;44529;44530;44531;44532;44533;44534;44535 44520 1192 14 DDAMLLK Unmodified 804.40514 0.40514012 930 P10809 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43.789 42.8 2 0.020877 53062 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 111.28 79.975 1586900000 32524000 664050000 394210 48284000 44685000 63852000 56244000 69133000 46698000 78298000 106040000 79383000 87017000 75773000 134500000 6696 930 6118 56276;56277;56278;56279;56280;56281;56282;56283;56284;56285;56286;56287;56288;56289;56290 44536;44537;44538;44539;44540;44541;44542;44543;44544;44545;44546;44547 44538 12 DDANNDPQWSEEQLIAAK Unmodified 2042.9181 0.91812745 1135 P22234 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.9 3.43 1 3 4 21 4 4 1 2 2 2 2 1 1 2 2 2 2 2 75.363 74.475 2;3 1.1149E-74 92615 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 137.3 135.13 715980000 56617000 86626000 0 16311000 26270000 39154000 22697000 33990000 14201000 28626000 94542000 65156000 32852000 66311000 132620000 6697 1135 6119 56291;56292;56293;56294;56295;56296;56297;56298;56299;56300;56301;56302;56303;56304;56305;56306;56307;56308;56309;56310;56311;56312;56313;56314;56315;56316;56317;56318;56319 44548;44549;44550;44551;44552;44553;44554;44555;44556;44557;44558;44559;44560;44561;44562;44563;44564;44565;44566;44567;44568;44569;44570;44571;44572;44573 44561 24 DDAQSVETLGK Unmodified 1161.5513 0.55134667 3601 Q8WYP5 AHCTF1 Protein ELYS yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 33.814 34.234 2 0.047177 37641 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 45.022 29.38 19604000 0 0 0 0 0 0 0 0 0 4944900 4594100 0 4790100 0 5275100 6698 3601 6120 56320;56321;56322;56323 44574 44574 1 DDATLSGK Unmodified 805.38176 0.38176214 2292 Q13442 PDAP1 28 kDa heat- and acid-stable phosphoprotein yes yes 0 0 0 By MS/MS By MS/MS 1 0 2 1 1 106.68 109.76 2 0.0096783 92459 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 132.57 74.321 136710000 98016000 38697000 0 0 0 0 0 0 0 0 0 0 0 0 0 6699 2292 6121 56324;56325 44575;44576 44575 2 DDAVTSAGSEEK Unmodified 1207.5204 0.52044047 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.31 2.4 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 20.574 21.179 2 4.8741E-06 92031 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 136.96 116.63 123920000 25340000 0 0 0 7492300 7554900 9189600 6595800 8457900 8357600 10998000 14670000 9401600 6172400 9687700 6700 3443 6122 56326;56327;56328;56329;56330;56331;56332;56333;56334;56335;56336;56337;56338 44577;44578;44579;44580;44581;44582;44583;44584;44585;44586;44587;44588;44589;44590 44582 14 DDCFNVNIQPPVGELLLPVAMSEK Unmodified 2684.319 0.31897424 128 O00203 AP3B1 AP-3 complex subunit beta-1 yes yes 0 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 3 1 99.932 96.117 2;3 1.0223E-96 118365 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 196.22 187.42 130070000 0 128120000 1951900 0 0 0 0 0 0 0 0 0 0 0 0 6701 128 6123 56339;56340;56341;56342 44591;44592;44593;44594 44592 4 DDCFNVNIQPPVGELLLPVAMSEK Oxidation (M) 2700.3139 0.31388886 128 O00203 AP3B1 AP-3 complex subunit beta-1 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 98.506 94.484 2;3 9.3849E-19 116504 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.096 91.041 27445000 0 27445000 0 0 0 0 0 0 0 0 0 0 0 0 0 6702 128 6123 56343;56344 44595;44596 44595 165 1 DDDDEEIGGPK Unmodified 1188.4782 0.4782413 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.3 3.41 1 1 8 1 1 1 1 1 1 1 1 1 1 29.427 29.805 2 4.3093E-11 21336 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 155.07 152.91 491500000 12467000 5820300 0 0 0 2670400 18232000 23290000 42527000 86061000 120230000 177130000 0 0 3067200 6703 4226 6124 56345;56346;56347;56348;56349;56350;56351;56352;56353;56354 44597;44598;44599;44600;44601;44602;44603;44604;44605 44603 9 DDDDEEIGGPKEELIPEK Unmodified 2026.9219 0.92187542 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 0 1 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 60.778 61.061 3 0.00028544 69265 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 47.754 43.747 34034000 0 0 0 0 0 0 1439300 0 0 2635700 6509300 23449000 0 0 0 6704 4226 6125 56355;56356;56357;56358 44606;44607;44608;44609 44607 4 DDDDVVIGK Unmodified 974.45566 0.45565537 257 O15144 ARPC2 Actin-related protein 2/3 complex subunit 2 yes yes 0 0 0 By MS/MS 1 0 1 1 108.71 109.6 2 0.019416 102105 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 76.478 56.774 15555000 0 15555000 0 0 0 0 0 0 0 0 0 0 0 0 0 6705 257 6126 56359 44610 44610 1 DDDEVFEK Unmodified 995.40837 0.40837082 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 29.645 29.858 2 0.027935 32237 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 57.047 38.317 30350000 0 0 0 0 1299900 5249500 0 0 4193900 3906500 3284500 0 3615700 3715800 5084300 6706 2102 6127 56360;56361;56362;56363;56364;56365;56366;56367 44611 44611 1 DDDFERISELGAGNGGVVTK Unmodified 2077.9916 0.99162674 1373 P36507 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.91 3.42 2 1 8 2 1 1 1 1 1 1 1 1 1 75.874 74.945 3 3.2872E-23 92114 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.13 99.487 272410000 0 203660000 11914000 1875000 0 11257000 0 0 6919400 0 5528900 5276700 4444600 5530000 16001000 6707 1373 6128 56368;56369;56370;56371;56372;56373;56374;56375;56376;56377;56378 44612;44613;44614;44615;44616 44613 5 DDDFPSLQAIAR Unmodified 1346.6466 0.64664404 3149 Q86UK7 ZNF598 Zinc finger protein 598 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 81.343 81.387 2 0.00089612 93881 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.377 76.163 68571000 0 0 0 4331400 2720300 5173100 4039700 6300300 0 0 10262000 12178000 4578900 5395800 13591000 6708 3149 6129 56379;56380;56381;56382;56383;56384;56385;56386;56387;56388 44617;44618;44619;44620;44621;44622;44623;44624;44625;44626 44621 10 DDDIAALVVDNGSGMCK Acetyl (Protein N-term);Oxidation (M) 1836.787 0.78697862 1815 P60709 ACTB Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.35 3 11 2 57 6 8 2 6 5 5 4 4 5 6 5 5 4 4 4 85.858 85.184 2 0 98605 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 276.95 264.37 27165000000 584180000 727300000 40177000 1529000000 2222500000 2045400000 2387100000 1382800000 1665800000 2172500000 2442800000 3932800000 1874900000 1690600000 2466900000 6709 1815 6130 56389;56390;56391;56392;56393;56394;56395;56396;56397;56398;56399;56400;56401;56402;56403;56404;56405;56406;56407;56408;56409;56410;56411;56412;56413;56414;56415;56416;56417;56418;56419;56420;56421;56422;56423;56424;56425;56426;56427;56428;56429;56430;56431;56432;56433;56434;56435;56436;56437;56438;56439;56440;56441;56442;56443;56444;56445;56446;56447;56448;56449;56450;56451;56452;56453;56454;56455;56456;56457;56458;56459;56460;56461 44627;44628;44629;44630;44631;44632;44633;44634;44635;44636;44637;44638;44639;44640;44641;44642;44643;44644;44645;44646;44647;44648;44649;44650;44651;44652;44653;44654;44655;44656;44657;44658;44659;44660;44661;44662;44663;44664;44665;44666;44667;44668;44669;44670;44671;44672;44673;44674;44675;44676;44677;44678;44679;44680;44681;44682;44683;44684;44685;44686;44687;44688;44689;44690;44691;44692;44693;44694;44695;44696;44697;44698;44699;44700;44701;44702;44703;44704;44705;44706;44707;44708;44709;44710;44711;44712;44713;44714;44715;44716;44717;44718;44719;44720;44721;44722;44723;44724;44725;44726;44727;44728;44729;44730;44731;44732;44733;44734;44735;44736;44737;44738;44739;44740;44741;44742;44743;44744;44745;44746 44645 2938 120 DDDIAALVVDNGSGMCK Acetyl (Protein N-term) 1820.7921 0.792064 1815 P60709 ACTB Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.46 3.17 2 7 2 46 6 4 1 4 4 4 2 3 3 5 5 3 3 6 4 88.847 88.25 2;3 0 103477 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 270.02 264.41 14752000000 1160400000 503150000 11435000 393210000 944220000 965960000 545670000 1014400000 578440000 1180100000 1533700000 1582000000 769010000 1124300000 2446000000 6710 1815 6130 56462;56463;56464;56465;56466;56467;56468;56469;56470;56471;56472;56473;56474;56475;56476;56477;56478;56479;56480;56481;56482;56483;56484;56485;56486;56487;56488;56489;56490;56491;56492;56493;56494;56495;56496;56497;56498;56499;56500;56501;56502;56503;56504;56505;56506;56507;56508;56509;56510;56511;56512;56513;56514;56515;56516;56517;56518 44747;44748;44749;44750;44751;44752;44753;44754;44755;44756;44757;44758;44759;44760;44761;44762;44763;44764;44765;44766;44767;44768;44769;44770;44771;44772;44773;44774;44775;44776;44777;44778;44779;44780;44781;44782;44783;44784;44785;44786;44787;44788;44789;44790;44791;44792;44793;44794;44795;44796;44797;44798;44799;44800;44801;44802;44803;44804;44805;44806;44807;44808;44809;44810;44811;44812;44813;44814;44815;44816;44817;44818;44819;44820;44821;44822;44823;44824;44825;44826;44827;44828;44829;44830;44831;44832;44833 44750 86 DDDIAALVVDNGSGMCK Oxidation (M) 1794.7764 0.77641393 1815 P60709 ACTB Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed yes yes 0 1 0 By MS/MS 2 0 2 2 78.893 74.158 2;3 0.0011606 92389 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 53.861 47.28 83961000 0 83961000 0 0 0 0 0 0 0 0 0 0 0 0 0 6711 1815 6130 56519;56520 44834;44835 44835 2938 2 DDDIAALVVDNGSGMCK Unmodified 1778.7815 0.78149931 1815 P60709 ACTB Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 1 2 84.022 78.166 2;3 3.2333E-13 99494 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 111.79 102.85 92510000 18138000 74372000 0 0 0 0 0 0 0 0 0 0 0 0 0 6712 1815 6130 56521;56522;56523 44836;44837;44838;44839 44838 4 DDDIEEGDLPEHK Unmodified 1510.6423 0.64234652 2440 Q14696 MESDC2 LDLR chaperone MESD yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.4 3.86 5 2 8 2 4 1 1 1 1 1 1 1 1 1 38.828 36.551 2;3 1.691E-07 44383 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 107.09 100.51 798590000 107460000 616340000 3727800 0 2665400 3937100 1969000 0 0 0 11353000 13436000 3105800 7175800 27415000 6713 2440 6131 56524;56525;56526;56527;56528;56529;56530;56531;56532;56533;56534;56535;56536;56537;56538 44840;44841;44842;44843;44844;44845;44846;44847;44848 44842 6 DDDSLPAETGQNHPFFR Unmodified 1944.8602 0.86021864 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.973 66.056 3 0.00012447 75626 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 68.173 64.002 78252000 0 0 0 3700600 2339600 8202200 3277600 3290400 4768500 6951000 7674300 9198000 6372000 6583500 15895000 6714 619 6132 56539;56540;56541;56542;56543;56544;56545;56546;56547;56548;56549;56550 44849;44850;44851;44852;44853;44854;44855;44856;44857;44858;44859;44860;44861;44862 44854 14 DDDSLSEASHSK Unmodified 1289.5372 0.53715317 3420 Q8NDX6 ZNF740 Zinc finger protein 740 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 8.55 3.09 2 9 2 1 1 1 1 1 1 1 1 1 12.664 12.222 2;3 3.5212E-05 14294 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.77 112.15 47604000 0 36675000 0 0 0 1409500 728610 793970 1214300 1227600 1461800 0 1405600 1382500 1305000 6715 3420 6133 56551;56552;56553;56554;56555;56556;56557;56558;56559;56560;56561 44863;44864;44865;44866 44864 3 DDDSNFHMDFIVAASNLRAENYDIPSADRHK Unmodified 3562.6172 0.61715818 1137 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 2 By MS/MS 2.5 0.5 1 1 2 90.286 84.445 5 0.00049194 108037 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 31.78 26.825 72743000 72743000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6716 1137 6134 56562;56563 44867;44868 44868 2 DDDVPLDWR Unmodified 1129.504 0.50400254 642 O95340 PAPSS2 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 71.309 71.533 2 0.017618 81332 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 55.531 37.495 21805000 0 0 0 0 0 0 0 4600900 2369200 0 4448300 7396500 0 2990500 0 6717 642 6135 56564;56565;56566;56567;56568 44869;44870;44871 44870 3 DDDVPLDWRMK Unmodified 1388.6395 0.63945017 642 O95340 PAPSS2 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 76.077 71.234 3 0.0055974 91595 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.471 50.735 71306000 32799000 34938000 3568300 0 0 0 0 0 0 0 0 0 0 0 0 6718 642 6136 56569;56570;56571;56572 44872;44873;44874;44875 44874 4 DDDVPLDWRMK Oxidation (M) 1404.6344 0.63436479 642 O95340 PAPSS2 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 64.537 58.545 3 0.049703 78073 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.259 51.501 46663000 19016000 24777000 2869400 0 0 0 0 0 0 0 0 0 0 0 0 6719 642 6136 56573;56574;56575 44876 44876 0 DDDVPLMWR Unmodified 1145.5175 0.51754412 310 O43252 PAPSS1 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes yes 0 0 0 By MS/MS 2 0 1 1 82.266 77.561 2 0.012713 96524 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.753 70.173 19311000 0 19311000 0 0 0 0 0 0 0 0 0 0 0 0 0 6720 310 6137 56576 44877 44877 1 DDDWGNIK Unmodified 961.41412 0.4141249 1741 P54578 USP14 Ubiquitin carboxyl-terminal hydrolase 14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 41.471 40.6 2 0.010913 49712 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 111.04 94.109 551500000 28052000 402000000 0 0 3613300 17685000 0 0 5287700 11537000 15997000 13589000 8002000 13372000 32359000 6721 1741 6138 56577;56578;56579;56580;56581;56582;56583;56584;56585;56586;56587 44878;44879;44880 44879 3 DDEAVVQAPR Unmodified 1098.5306 0.53055165 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 31.588 31.763 2 7.0432E-10 34453 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 155.75 121.96 308730000 0 0 0 13815000 15485000 26867000 17450000 23819000 25987000 30786000 29096000 48973000 32962000 0 43487000 6722 1364 6139 56588;56589;56590;56591;56592;56593;56594;56595;56596;56597;56598 44881;44882;44883;44884;44885;44886;44887;44888;44889;44890;44891;44892 44889 5 DDEDTREALVK Unmodified 1289.6099 0.60992418 4739 Q9NYB0 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 yes yes 0 0 1 By MS/MS 2.67 0.471 1 2 3 27.684 23.392 2;3 0.019432 29257 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 54.471 45.742 63511000 0 63511000 0 0 0 0 0 0 0 0 0 0 0 0 0 6723 4739 6140 56599;56600;56601 44893;44894 44894 1 DDEEADAIYAALDK Unmodified 1537.6784 0.67839767 601 O94906 PRPF6 Pre-mRNA-processing factor 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 82.31 80.737 2 2.9181E-16 94390 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 119.45 113.14 95889000 8728600 25255000 0 4804100 0 8506900 0 8421000 0 0 12487000 0 9515400 0 18171000 6724 601 6141 56602;56603;56604;56605;56606;56607;56608;56609;56610;56611;56612;56613 44895;44896;44897;44898;44899;44900;44901;44902;44903;44904;44905;44906;44907;44908 44895 14 DDEEMNTWIQAISSAISSDK Unmodified 2238.9951 0.99505714 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 1 2 101.68 96.966 2;3 7.6518E-60 120112 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 157.38 152.3 14737000 0 14737000 0 0 0 0 0 0 0 0 0 0 0 0 0 6725 2047 6142 56614;56615;56616 44909;44910;44911;44912 44912 4 DDEENYLDLFSHK Unmodified 1623.7053 0.70528113 2138 Q07666 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 6.44 3.98 4 5 2 1 1 1 1 1 1 1 83.348 80.796 2;3 3.684E-07 101941 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 144.55 132.91 221010000 82617000 110150000 5056200 0 0 1250400 0 0 0 2970900 0 0 2125300 4528500 12311000 6726 2138 6143 56617;56618;56619;56620;56621;56622;56623;56624;56625 44913;44914;44915;44916 44916 3 DDEFTHLYTLIVR Unmodified 1620.8148 0.814772 1225 P27797 CALR Calreticulin yes yes 0 0 0 By MS/MS 2 0 1 1 97.368 89.237 3 2.1332E-11 115242 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 119.69 115.3 21502000 21502000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6727 1225 6144 56626 44917 44917 1 DDEFTHLYTLIVRPDNTYEVK Unmodified 2567.2544 0.25438337 1225 P27797 CALR Calreticulin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.38 0.484 10 6 8 6 2 95.573 90.552 3;4 1.4877E-151 114010 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 217.42 190.58 4685900000 4077100000 597090000 11734000 0 0 0 0 0 0 0 0 0 0 0 0 6728 1225 6145 56627;56628;56629;56630;56631;56632;56633;56634;56635;56636;56637;56638;56639;56640;56641;56642 44918;44919;44920;44921;44922;44923;44924;44925;44926;44927;44928;44929;44930;44931;44932;44933;44934;44935;44936 44934 17 DDEFYQQWQLK Unmodified 1498.6729 0.67285879 4282 Q9C0B1 FTO Alpha-ketoglutarate-dependent dioxygenase FTO yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 80.654 78.325 2 0.0054412 96210 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.815 88.687 59429000 0 49525000 1123900 0 0 0 0 0 0 0 0 0 0 0 8780200 6729 4282 6146 56643;56644;56645 44937;44938 44937 2 DDEMETDK Oxidation (M) 997.35462 0.35462069 4987 Q9UL46 PSME2 Proteasome activator complex subunit 2 yes yes 0 1 0 By MS/MS 1 0 1 1 106.07 111.33 2 0.027146 91973 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 75.213 64.799 14992000 14992000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6730 4987 6147 56646 44939 44939 6333 1 DDESNLVEEK Unmodified 1176.5146 0.51462681 2143 Q07866 KLC1 Kinesin light chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 28.39 28.541 2 0.0029937 30784 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 78.113 56.262 41404000 0 0 0 3064500 3196400 3791400 2564100 2794100 0 4764200 4930000 0 4946300 2941100 8412100 6731 2143 6148 56647;56648;56649;56650;56651;56652;56653;56654;56655;56656 44940;44941;44942;44943;44944;44945;44946;44947;44948 44941 9 DDETVDSLGPLEK Unmodified 1416.662 0.66201933 4943 Q9UJX2 CDC23 Cell division cycle protein 23 homolog yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 62.477 62.78 2 0.00071708 70851 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 88.596 80.275 16388000 0 0 0 0 0 0 0 0 0 3262100 0 0 0 4333300 8792300 6732 4943 6149 56657;56658;56659;56660 44949;44950;44951;44952 44951 4 DDEVAQLK Unmodified 916.45018 0.45017606 836 P07195 LDHB L-lactate dehydrogenase B chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.24 3.77 1 3 2 11 3 2 1 1 1 1 1 1 1 1 1 1 1 1 32.569 31.667 2 0.0064414 28423 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 120.65 80.982 1749000000 562070000 547130000 29065000 5457100 7049300 19082000 8624900 7711800 12580000 14320000 0 84184000 13066000 95123000 343510000 6733 836 6150 56661;56662;56663;56664;56665;56666;56667;56668;56669;56670;56671;56672;56673;56674;56675;56676;56677 44953;44954;44955;44956;44957;44958;44959;44960;44961;44962;44963 44956 9 DDEVAQLKK Unmodified 1044.5451 0.54513908 836 P07195 LDHB L-lactate dehydrogenase B chain yes yes 0 0 1 By MS/MS 3 0 1 1 22.881 18.98 2 0.02056 23756 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 98.458 61.698 5263900 0 5263900 0 0 0 0 0 0 0 0 0 0 0 0 0 6734 836 6151 56678 44964 44964 0 DDEVQVVR Unmodified 958.47197 0.47197413 1843 P61254;Q9UNX3 RPL26;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.915 28.113 2 0.0043449 29799 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 111.04 74.015 1906600000 0 0 0 123190000 120410000 146630000 127360000 126020000 128350000 172650000 201280000 268140000 129290000 159920000 203350000 6735 1843 6152 56679;56680;56681;56682;56683;56684;56685;56686;56687;56688;56689;56690 44965;44966;44967;44968;44969;44970;44971;44972;44973;44974;44975;44976;44977;44978 44970 13 DDEVQVVRGHYK Unmodified 1443.7106 0.71064128 1843 P61254;Q9UNX3 RPL26;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 yes no 0 0 1 By MS/MS By MS/MS By MS/MS 1.83 0.373 1 5 3 1 2 48.075 44.876 2;3 1.6523E-21 43053 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 167.12 128.81 339550000 222120000 9617900 107810000 0 0 0 0 0 0 0 0 0 0 0 0 6736 1843 6153 56691;56692;56693;56694;56695;56696 44979;44980;44981;44982;44983;44984;44985;44986 44985 8 DDFALVQRPGPGLSQEAAR Unmodified 2026.0232 0.023201643 2921 Q6P1N0 CC2D1A Coiled-coil and C2 domain-containing protein 1A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.373 69.447 3 7.9359E-06 79764 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 67.43 63.268 72360000 0 0 0 1974700 2419600 7874400 3588000 3443800 5993700 7137600 6935600 6403800 5179900 5294600 16114000 6737 2921 6154 56697;56698;56699;56700;56701;56702;56703;56704;56705;56706;56707;56708 44987;44988;44989;44990;44991;44992;44993;44994;44995;44996;44997 44987 11 DDFLQQNGYTPYDR Unmodified 1730.7536 0.7536283 1398 P38606 ATP6V1A V-type proton ATPase catalytic subunit A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 9 1 2 1 1 1 1 1 1 69.111 69.327 2 0.00049574 79694 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 85.958 76.77 26213000 0 0 0 0 0 4793600 0 1532900 0 2700800 3045800 4040600 1577800 2706700 5814800 6738 1398 6155 56709;56710;56711;56712;56713;56714;56715;56716;56717 44998;44999;45000;45001;45002;45003 44999 6 DDFPGGVDNQELNR Unmodified 1574.6961 0.69611342 4814 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 55.391 55.549 2 0.0016265 62631 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 60.49 53.109 40776000 0 0 0 0 2815100 4506500 3538800 4159200 3440500 4275400 4591300 0 5719000 3568200 4162600 6739 4814 6156 56718;56719;56720;56721;56722;56723;56724;56725;56726;56727;56728 45004;45005;45006;45007;45008;45009;45010;45011;45012;45013;45014;45015 45007 12 DDFVLDSEYLVTLLVVVPK Unmodified 2163.1715 0.17148859 1122 P21283 ATP6V1C1 V-type proton ATPase subunit C 1 yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 3 3 3 3 105.98 101.21 2;3 0.00037072 125545 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.157 48.364 14165000 8362300 5802800 0 0 0 0 0 0 0 0 0 0 0 0 0 6740 1122 6157 56729;56730;56731;56732;56733;56734 45016;45017;45018 45016 3 DDGEEEFAGAK Unmodified 1166.4728 0.472762 3308 Q8N163 CCAR2 Cell cycle and apoptosis regulator protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 27.95 28.218 2 0.00064815 29463 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.649 80.07 53835000 0 0 0 0 0 6948500 4686100 0 3274400 4904900 9380100 0 7320500 6155900 11165000 6741 3308 6158 56735;56736;56737;56738;56739;56740;56741;56742;56743 45019;45020;45021;45022;45023;45024;45025;45026;45027 45022 9 DDGLFSGDPNWFPK Unmodified 1593.71 0.70997257 1391 P37802 TAGLN2 Transgelin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 89.68 89.819 2 0.0093393 104011 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.513 69.98 71910000 0 0 0 0 0 5042600 1575800 2423500 2156500 4833600 6291000 3929200 1172700 4191100 40294000 6742 1391 6159 56744;56745;56746;56747;56748;56749;56750;56751;56752;56753 45028 45028 0 DDGNQPQDQITITGYEK Unmodified 1920.8701 0.87011462 2033 Q00341 HDLBP Vigilin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.341 61.441 2 2.8859E-28 69497 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 140.01 116.16 154020000 0 0 0 5103900 5444200 16272000 7267200 10870000 8330600 15314000 17416000 15984000 10212000 13653000 28149000 6743 2033 6160 56754;56755;56756;56757;56758;56759;56760;56761;56762;56763;56764;56765 45029;45030;45031;45032;45033;45034;45035;45036;45037;45038;45039;45040;45041 45033 13 DDGPSQSESATETAMTLPSESR Oxidation (M) 2310.9758 0.97577826 4468 Q9H9A6 LRRC40 Leucine-rich repeat-containing protein 40 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 47.041 46.894 3 9.9423E-05 52951 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 40.622 37.086 21258000 0 0 0 3350200 2966100 0 4348600 0 3539900 7053300 0 0 0 0 0 6744 4468 6161 56766;56767;56768;56769;56770 45042 45042 5903 1 DDGPSQSESATETAMTLPSESR Unmodified 2294.9809 0.98086364 4468 Q9H9A6 LRRC40 Leucine-rich repeat-containing protein 40 yes yes 0 0 0 By matching By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 61.339 61.588 2 1.4234E-13 69709 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 101.39 95.223 22490000 0 0 0 0 0 4734700 0 0 2749600 4536400 3667000 0 0 0 6802100 6745 4468 6161 56771;56772;56773;56774;56775 45043 45043 1 DDGTVIHFNNPK Unmodified 1355.647 0.64697839 3900 Q96K17 BTF3L4 Transcription factor BTF3 homolog 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.16 3.73 5 2 12 1 4 2 1 2 2 2 1 2 2 49.136 47.406 2;3 1.9639E-13 61448 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 154.81 154.81 1685400000 15024000 1125700000 38041000 0 4404000 0 0 0 0 68027000 116300000 98905000 14549000 62639000 141830000 6746 3900 6162 56776;56777;56778;56779;56780;56781;56782;56783;56784;56785;56786;56787;56788;56789;56790;56791;56792;56793;56794 45044;45045;45046;45047;45048;45049;45050;45051;45052;45053;45054;45055;45056;45057;45058 45045 9 DDGVFVQEVTQNSPAAR Unmodified 1831.8701 0.87005504 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 72.964 73.027 2;3 9.8504E-42 83525 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 176.05 150.61 311290000 0 0 0 17778000 22658000 21288000 18555000 25180000 21181000 23428000 29161000 35863000 29757000 26706000 39739000 6747 2172 6163 56795;56796;56797;56798;56799;56800;56801;56802;56803;56804;56805;56806;56807;56808;56809;56810;56811;56812;56813;56814;56815;56816;56817;56818 45059;45060;45061;45062;45063;45064;45065;45066;45067;45068;45069;45070;45071;45072;45073;45074;45075;45076;45077;45078;45079;45080 45064 17 DDGVSIPGEYTSFLAPISSSK Unmodified 2169.0477 0.047744639 208 O14744 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.29 3.67 4 2 11 1 4 1 1 1 1 1 1 1 1 1 1 2 93.152 91.641 2;3 1.2376E-23 112213 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 142.1 135.06 906700000 21518000 825180000 1719200 0 1673400 2494400 0 2339800 1591100 9268600 6685600 7011700 1285400 4034900 21898000 6748 208 6164 56819;56820;56821;56822;56823;56824;56825;56826;56827;56828;56829;56830;56831;56832;56833;56834;56835 45081;45082;45083;45084;45085;45086;45087;45088;45089;45090;45091;45092;45093 45082 12 DDHSASRQPEYR Unmodified 1459.644 0.64401827 3433 Q8NEY8 PPHLN1 Periphilin-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 8.6948 8.8021 3 0.023512 7209 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 36 30.285 41180000 0 0 0 2747700 3419500 1857300 2294500 1366000 2132300 3845500 0 10138000 4634200 3757000 4987800 6749 3433 6165 56836;56837;56838;56839;56840;56841;56842;56843;56844;56845;56846 45094 45094 1 DDIAQVDYVEPSQNTISLK Unmodified 2134.043 0.042993612 136 O00267 SUPT5H Transcription elongation factor SPT5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78.682 78.11 2 4.1121E-141 90388 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 239.75 229.9 203310000 8607200 0 0 6165800 9215700 16980000 9747200 11605000 10295000 27084000 23189000 21056000 13112000 16374000 29875000 6750 136 6166 56847;56848;56849;56850;56851;56852;56853;56854;56855;56856;56857;56858;56859;56860 45095;45096;45097;45098;45099;45100;45101;45102;45103;45104;45105;45106;45107;45108 45099 14 DDIDLDALAAEIEGAGAAK Unmodified 1856.9004 0.90035212 437 O60841 EIF5B Eukaryotic translation initiation factor 5B yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 97.928 92.537 2 7.0805E-68 116136 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 150.29 133.67 63815000 28381000 35434000 0 0 0 0 0 0 0 0 0 0 0 0 0 6751 437 6167 56861;56862;56863 45109;45110;45111 45111 3 DDIDRMVQEAERYK Unmodified 1766.8257 0.82574739 1743 P54652 HSPA2 Heat shock-related 70 kDa protein 2 yes yes 0 0 2 By MS/MS 2 0 1 1 80.35 72.219 3 1.2135E-30 94735 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 127.71 123.11 25999000 25999000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6752 1743 6168 56864 45112 45112 1 DDIENMVK Unmodified 962.4379 0.43789681 1399 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 44.869 45.114 2 0.018283 49955 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.567 42.075 118670000 0 0 0 0 7911900 11219000 8768900 0 5344100 11222000 15117000 10189000 10422000 10101000 28375000 6753 1399 6169 56865;56866;56867;56868;56869;56870;56871;56872;56873;56874 45113;45114;45115;45116;45117;45118 45118 6 DDIESLHDK Unmodified 1070.488 0.48801813 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 21.882 21.25 2 0.013293 22753 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 60.019 49.154 184040000 21476000 83146000 0 0 0 12242000 5163200 4209700 6915800 11739000 8200500 0 13555000 8794600 8595000 6754 2392 6170 56875;56876;56877;56878;56879;56880;56881;56882;56883;56884;56885 45119;45120;45121;45122;45123 45119 5 DDIEVRFYEDDENGWQAFGDFSPTDVHK Unmodified 3330.4378 0.43778006 2042 Q00653 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit yes yes 0 0 1 By MS/MS 2 0 1 1 93.882 85.752 4 0.00016462 111063 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 38.691 36.438 9316600 9316600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6755 2042 6171 56886 45124;45125 45125 2 DDIIENAPTTHTEEYSGEEK Unmodified 2276.9921 0.99208025 208 O14744 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 49.292 49.264 3 8.7348E-62 54622 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 136.04 123.55 59784000 0 0 0 5309200 5517700 0 11015000 0 0 0 0 0 0 21787000 16155000 6756 208 6172 56887;56888;56889;56890;56891 45126;45127;45128;45129;45130 45127 5 DDIILFSGK Unmodified 1006.5335 0.53351176 526 O75635 SERPINB7 Serpin B7 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching 10 0 6 1 1 1 1 1 1 74.898 74.888 2 0.021454 86851 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 52.255 27.581 21453000 0 0 0 5128800 1788300 0 1531000 7916000 0 0 2138100 2950900 0 0 0 6757 526 6173 56892;56893;56894;56895;56896;56897 45131 45131 1 DDILEILDDRK Unmodified 1343.6933 0.69325988 2209 Q12929 EPS8 Epidermal growth factor receptor kinase substrate 8 yes yes 0 0 1 By MS/MS 2 0 1 1 88.977 80.847 3 0.0090743 105143 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.569 37.939 6604800 6604800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6758 2209 6174 56898 45132 45132 1 DDILNGSHPVSFDK Unmodified 1542.7314 0.7314363 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 60.205 60.31 2;3 3.1285E-05 68550 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 90.653 74.991 398990000 0 0 0 16487000 15923000 49800000 24357000 21457000 16686000 40065000 38855000 39780000 28542000 34299000 72736000 6759 5187 6175 56899;56900;56901;56902;56903;56904;56905;56906;56907;56908;56909;56910;56911;56912;56913;56914;56915;56916;56917;56918;56919;56920;56921;56922 45133;45134;45135;45136;45137;45138;45139;45140;45141 45136 9 DDIPVFLR Unmodified 973.52328 0.52328142 4831 Q9UBB4 ATXN10 Ataxin-10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.361 80.421 2 0.0068152 92447 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.62 76.143 539650000 0 0 0 16559000 17974000 63142000 27346000 32418000 24826000 65106000 48259000 55058000 38754000 54178000 96035000 6760 4831 6176 56923;56924;56925;56926;56927;56928;56929;56930;56931;56932;56933;56934 45142;45143;45144;45145;45146;45147;45148;45149;45150;45151 45145 10 DDIRYLLTMDK Oxidation (M) 1397.6861 0.68606601 4857 Q9UBT2 UBA2 SUMO-activating enzyme subunit 2 yes yes 0 1 1 By MS/MS By MS/MS 2 0 4 2 2 75.182 71.287 3 0.029167 89533 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 43.382 30.246 64823000 0 59166000 5657000 0 0 0 0 0 0 0 0 0 0 0 0 6761 4857 6177 56935;56936;56937;56938 45152;45153 45153 2 DDIRYLLTMDK Unmodified 1381.6912 0.69115139 4857 Q9UBT2 UBA2 SUMO-activating enzyme subunit 2 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 83.769 78.255 3 1.814E-07 98676 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.03 79.179 73400000 24033000 49367000 0 0 0 0 0 0 0 0 0 0 0 0 0 6762 4857 6177 56939;56940;56941 45154;45155 45154 2 DDITEPAVCALR Unmodified 1358.65 0.65001485 1010 P14923 JUP Junction plakoglobin yes yes 0 0 0 By matching By MS/MS By matching 10 0 3 1 1 1 65.479 65.386 2 0.0072566 74994 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 53.756 39.087 20036000 0 0 0 13120000 0 3458000 0 0 0 0 0 3457700 0 0 0 6763 1010 6178 56942;56943;56944 45156 45156 1 DDITGEPLIR Unmodified 1127.5823 0.58225287 1748 P54819 AK2 Adenylate kinase 2, mitochondrial;Adenylate kinase 2, mitochondrial, N-terminally processed yes yes 0 0 0 By MS/MS 10 0 1 1 59.955 59.967 2 0.049335 68545 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 59.35 45.758 21701000 0 0 0 0 0 21701000 0 0 0 0 0 0 0 0 0 6764 1748 6179 56945 45157 45157 0 DDITGEPLIRR Unmodified 1283.6834 0.68336389 1748 P54819 AK2 Adenylate kinase 2, mitochondrial;Adenylate kinase 2, mitochondrial, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 49.219 49.507 3 0.0072329 56168 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 32.254 18.854 92213000 0 0 0 0 0 24775000 11574000 0 14062000 0 15752000 0 0 0 26050000 6765 1748 6180 56946;56947;56948;56949;56950 45158;45159;45160;45161;45162 45159 5 DDITGEPLIRRSDDNEK Unmodified 1971.9498 0.94976193 1748 P54819 AK2 Adenylate kinase 2, mitochondrial;Adenylate kinase 2, mitochondrial, N-terminally processed yes yes 0 0 2 By MS/MS By MS/MS 2 0 3 2 1 49.987 43.385 3;4 0.015867 59553 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 39.143 16.929 114850000 103980000 0 10873000 0 0 0 0 0 0 0 0 0 0 0 0 6766 1748 6181 56951;56952;56953 45163;45164;45165 45165 2 DDIVDRAK Unmodified 930.47706 0.47705951 1440 P41250 GARS Glycine--tRNA ligase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.33 0.471 2 1 1 1 1 19.644 15.946 2 0.015235 23110 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 122.74 37.477 477380000 135000000 320040000 22342000 0 0 0 0 0 0 0 0 0 0 0 0 6767 1440 6182 56954;56955;56956 45166;45167;45168 45167 2 DDKPIRALDEGDIALLK Unmodified 1881.0207 0.020742027 1369 P35998 PSMC2 26S protease regulatory subunit 7 yes yes 0 0 2 By MS/MS 2 0 1 1 84.297 76.166 3 0.016718 99406 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.255 42.641 201600000 201600000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6768 1369 6183 56957 45169 45169 1 DDLADYGGYDGGYVQDYEDFM Unmodified 2406.9111 0.91105274 547 O75822 EIF3J Eukaryotic translation initiation factor 3 subunit J yes yes 0 0 0 By MS/MS By MS/MS 1 0 2 1 1 104.41 107.49 3 0.0003045 96956 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 54.103 52.921 35285000 16144000 19141000 0 0 0 0 0 0 0 0 0 0 0 0 0 6769 547 6184 56958;56959 45170;45171 45171 2 DDLADYGGYDGGYVQDYEDFM Oxidation (M) 2422.906 0.90596736 547 O75822 EIF3J Eukaryotic translation initiation factor 3 subunit J yes yes 0 1 0 By MS/MS 1 0 1 1 102.78 103.67 3 0.00027762 94957 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 52.814 52.814 10323000 0 10323000 0 0 0 0 0 0 0 0 0 0 0 0 0 6770 547 6184 56960 45172 45172 707 1 DDLDEEEDTHL Unmodified 1329.5208 0.5208344 171 O00592 PODXL Podocalyxin yes yes 0 0 0 By MS/MS 10 0 1 1 48.842 48.314 2 0.00414 54794 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 62.2 55.896 4090000 0 0 0 0 4090000 0 0 0 0 0 0 0 0 0 0 6771 171 6185 56961 45173 45173 1 DDLGPDRFSTLTDDPSPR Unmodified 2002.9232 0.92321283 2463 Q14C86 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.799 68.878 3 0.00020064 79031 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 57.616 54.377 101360000 0 0 0 4527000 3902700 16351000 4757600 4312000 8258300 10036000 9563700 7965000 6888600 7950100 16847000 6772 2463 6186 56962;56963;56964;56965;56966;56967;56968;56969;56970;56971;56972;56973 45174;45175;45176 45174 1 DDLGPDRFSTLTDDPSPRLSAQAQVAEDILDK Unmodified 3484.6958 0.69578566 2463 Q14C86 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 0 0 2 By MS/MS 2 0 1 1 92.893 84.763 4 1.2362E-35 109804 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.518 86.164 40744000 40744000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6773 2463 6187 56974 45177 45177 1 DDLLLTDFEGALK Unmodified 1448.7399 0.73987572 5171 Q9Y3P9 RABGAP1 Rab GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS 6.25 3.77 1 1 2 2 1 1 95.504 93.557 2 8.4928E-14 114710 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.75 98.005 83797000 0 81490000 0 0 0 0 0 0 0 1196900 0 0 0 0 1110300 6774 5171 6188 56975;56976;56977;56978 45178;45179;45180 45178 3 DDLLNVCMR Unmodified 1134.5162 0.51616391 2370 Q14134 TRIM29 Tripartite motif-containing protein 29 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 69.404 69.294 2 0.018767 79659 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 54.549 47.881 13724000 0 0 0 2351800 962280 2319300 0 0 0 1658500 0 0 0 0 6432500 6775 2370 6189 56979;56980;56981;56982;56983 45181;45182;45183 45181 3 DDLNSQLQESLR Unmodified 1416.6845 0.68448611 2689 Q4V328 GRIPAP1 GRIP1-associated protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 63.352 63.325 2 0.011701 72563 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 74.944 53.481 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6776 2689 6190 56984 45184 45184 1 DDLSDPPVASSCISEK Unmodified 1718.7669 0.76689511 3256 Q8IX90 SKA3 Spindle and kinetochore-associated protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 55.154 55.388 2 2.2583E-07 62869 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 85.288 65.527 35925000 0 0 0 0 0 4334900 3200700 3325600 4293400 4252200 5376600 0 0 4747000 6395000 6777 3256 6191 56985;56986;56987;56988;56989;56990;56991;56992;56993 45185;45186;45187;45188;45189;45190;45191;45192;45193 45190 9 DDLSFAGYQK Unmodified 1142.5244 0.52440364 2884 Q6IBS0 TWF2 Twinfilin-2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 55.151 55.265 2 0.0082748 62593 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 60.436 43.963 15299000 0 0 0 5493200 0 0 835970 0 0 0 3844900 5125100 0 0 0 6778 2884 6192 56994;56995;56996;56997;56998 45194;45195 45195 2 DDLSGADIK Unmodified 932.44509 0.44509068 1875 P62191 PSMC1 26S protease regulatory subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 29.754 29.999 2 0.0030483 32249 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 91.318 60.706 501020000 0 0 0 0 40560000 49354000 23317000 0 16025000 79590000 93548000 120390000 24221000 6933500 47085000 6779 1875 6193 56999;57000;57001;57002;57003;57004;57005;57006;57007;57008 45196;45197;45198;45199 45198 3 DDLVLLK Unmodified 814.48002 0.48001963 1789 P56962 STX17 Syntaxin-17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 65.592 65.624 2 0.048847 74765 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.803 28.146 22973000 0 0 0 1808600 2349200 2341700 0 0 0 3775700 4258700 4797000 0 0 3641800 6780 1789 6194 57009;57010;57011;57012;57013;57014;57015 45200 45200 1 DDNFGEGNDGGILDDK Unmodified 1679.6911 0.69108763 382 O60216 RAD21 Double-strand-break repair protein rad21 homolog yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 62.577 56.683 2 0.0010887 75229 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.473 52.154 15158000 0 15158000 0 0 0 0 0 0 0 0 0 0 0 0 0 6781 382 6195 57016;57017 45201;45202 45202 2 DDNGFGLTVSGDNPVFVQSVK Unmodified 2194.0542 0.054227 4778 Q9NZN5 ARHGEF12 Rho guanine nucleotide exchange factor 12 yes yes 0 0 0 By MS/MS 2 0 1 1 89.777 84.904 2 1.5095E-17 105515 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.14 114.56 19186000 0 19186000 0 0 0 0 0 0 0 0 0 0 0 0 0 6782 4778 6196 57018 45203 45203 1 DDNHSLTFFPESTEQK Unmodified 1893.8381 0.83808621 3233 Q8IW35 CEP97 Centrosomal protein of 97 kDa yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.31 3.1 1 2 10 1 2 1 1 1 1 1 1 1 1 1 1 71.499 70.566 3 6.5628E-05 80397 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.89 71.17 106000000 207500 52096000 0 4074700 2784700 5011100 0 3484300 0 5886800 5808500 6956300 4411400 4641100 10642000 6783 3233 6197 57019;57020;57021;57022;57023;57024;57025;57026;57027;57028;57029;57030;57031 45204;45205;45206;45207;45208;45209;45210;45211 45206 8 DDNMFQIGK Oxidation (M) 1082.4703 0.47025958 1730 P53999 SUB1 Activated RNA polymerase II transcriptional coactivator p15 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.633 41.811 2 0.0021004 47281 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 92.653 83.731 194860000 0 0 0 11639000 16216000 11359000 17631000 10370000 10363000 15637000 28276000 17829000 19812000 13460000 22268000 6784 1730 6198 57032;57033;57034;57035;57036;57037;57038;57039;57040;57041;57042;57043 45212;45213;45214;45215;45216;45217;45218;45219;45220 45220 2807 7 DDNMFQIGK Unmodified 1066.4753 0.47534495 1730 P53999 SUB1 Activated RNA polymerase II transcriptional coactivator p15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.886 59.995 2 0.0046657 68399 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 86.095 63.204 297630000 0 0 0 14031000 17907000 20185000 20974000 23421000 13213000 29294000 39062000 27508000 26434000 22738000 42863000 6785 1730 6198 57044;57045;57046;57047;57048;57049;57050;57051;57052;57053;57054;57055 45221;45222;45223;45224;45225;45226;45227;45228;45229;45230;45231;45232 45228 8 DDNPNLPR Unmodified 939.44101 0.44100836 64 CON__P02768-1;P02768 ALB Serum albumin yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.805 25.009 2 0.0071071 26144 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 90.777 71.14 + 1685700000 0 0 0 616760000 30021000 28965000 22680000 649320000 21427000 41078000 45748000 67076000 95075000 17538000 50041000 6786 64 6199 57056;57057;57058;57059;57060;57061;57062;57063;57064;57065;57066;57067 45233;45234;45235;45236;45237;45238;45239;45240;45241;45242;45243;45244 45239 11 DDPENDNSELPTAK Unmodified 1543.6638 0.66381024 3702 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.34 1 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 38.358 38.117 2 3.3854E-54 91963 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 193.3 175.4 545990000 83809000 15133000 0 26573000 24533000 54765000 26184000 23344000 28742000 39024000 56420000 45983000 38974000 36779000 45730000 6787 3702 6200 57068;57069;57070;57071;57072;57073;57074;57075;57076;57077;57078;57079;57080;57081;57082 45245;45246;45247;45248;45249;45250;45251;45252;45253;45254;45255;45256;45257;45258;45259;45260 45251 16 DDPFTQPDQSTPSSFDSLK Unmodified 2110.9331 0.93310881 2021 P98082 DAB2 Disabled homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 76.691 76.744 2 1.6265E-38 88188 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 132.79 125.42 49298000 0 0 0 3956400 3082600 0 4948600 3326400 0 4547700 6205300 4586000 4389400 4421100 9834900 6788 2021 6201 57083;57084;57085;57086;57087;57088;57089;57090;57091;57092 45261;45262;45263;45264;45265;45266;45267 45263 7 DDPHACYSTVFDK Unmodified 1553.6457 0.64565776 65 CON__P02769 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 51.276 50.695 3 0.0097601 58033 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 40.237 33.344 + 44223000 0 0 0 20543000 23680000 0 0 0 0 0 0 0 0 0 0 6789 65 6202 57093;57094 45268 45268 1 DDPHLSSVPVVESEK Unmodified 1636.7944 0.79443049 2982 Q6UX04 CWC27 Peptidyl-prolyl cis-trans isomerase CWC27 homolog yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 58.448 53.613 3 0.00037459 66408 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 71.031 62.656 233540000 0 231100000 2435000 0 0 0 0 0 0 0 0 0 0 0 0 6790 2982 6203 57095;57096;57097 45269;45270 45270 0 DDPLTNLNTAFDVAEK Unmodified 1761.8421 0.84210896 971 P12814 ACTN1 Alpha-actinin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.69 3 3 9 2 4 1 1 1 1 1 1 1 1 1 88.331 86.526 2;3 8.6443E-132 106673 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 277.06 260.69 2754800000 62588000 2585400000 0 0 2070800 6302800 0 3713500 0 10162000 13764000 13696000 4084600 11848000 41163000 6791 971 6204 57098;57099;57100;57101;57102;57103;57104;57105;57106;57107;57108;57109;57110;57111;57112 45271;45272;45273;45274;45275;45276;45277;45278;45279;45280;45281;45282;45283;45284 45274 14 DDPPPPEDDENK Unmodified 1366.5525 0.55246888 1946 P63208 SKP1 S-phase kinase-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.88 3.69 2 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 25.119 25.163 2 2.018E-24 91933 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 174.86 160.73 756930000 202280000 247310000 0 11507000 10958000 25349000 17742000 10768000 15604000 23237000 34641000 36344000 22757000 25743000 72687000 6792 1946 6205 57113;57114;57115;57116;57117;57118;57119;57120;57121;57122;57123;57124;57125;57126;57127;57128 45285;45286;45287;45288;45289;45290;45291;45292;45293;45294;45295;45296 45288 11 DDPQLYQEIQER Unmodified 1532.7107 0.71070086 2819 Q5VV41 ARHGEF16 Rho guanine nucleotide exchange factor 16 yes yes 0 0 0 By MS/MS 10 0 1 1 63.026 63.222 2 0.037345 71429 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 48.998 33.107 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6793 2819 6206 57129 45297 45297 1 DDPRDETYKPHLER Unmodified 1769.8333 0.83327561 3898 Q96JP5 ZFP91 E3 ubiquitin-protein ligase ZFP91 yes yes 0 0 2 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 1 1 2 1 1 2 2 1 2 30.748 31.048 3;4 0.011604 32623 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 34.432 30.261 518580000 0 0 0 0 23900000 11850000 5042900 1668700 71667000 13509000 5786000 164030000 97026000 8484300 115620000 6794 3898 6207 57130;57131;57132;57133;57134;57135;57136;57137;57138;57139;57140;57141;57142;57143;57144 45298;45299;45300;45301;45302 45298 4 DDPSAMDFVTSAANLR Unmodified 1708.7726 0.77264919 4857 Q9UBT2 UBA2 SUMO-activating enzyme subunit 2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 86.213 86.349 2 8.6973E-05 99724 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.402 89.089 14027000 0 0 0 0 0 0 0 0 0 0 0 0 0 1911700 12115000 6795 4857 6208 57145;57146 45303 45303 1 DDPSAMDFVTSAANLR Oxidation (M) 1724.7676 0.76756381 4857 Q9UBT2 UBA2 SUMO-activating enzyme subunit 2 yes yes 0 1 0 By MS/MS 10 0 1 1 77.038 77.159 2 0.020958 88243 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 43.991 29.301 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6796 4857 6208 57147 45304 45304 1 DDPSKPVHLTAFLGYK Unmodified 1786.9254 0.92538508 1402 P39023 RPL3 60S ribosomal protein L3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 76.111 76.303 3 0.0028236 87463 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.657 34.127 39061000 0 0 0 0 0 0 0 0 0 0 0 7506800 5300300 0 26254000 6797 1402 6209 57148;57149;57150 45305;45306;45307;45308 45306 4 DDPTLLSSGR Unmodified 1059.5197 0.51965261 1133 P22061 PCMT1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase yes yes 0 0 0 By MS/MS 10 0 1 1 41.168 40.664 2 0.018954 45956 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 48.091 28.614 8434700 0 0 0 8434700 0 0 0 0 0 0 0 0 0 0 0 6798 1133 6210 57151 45309 45309 1 DDPVANMEPVQGENK Unmodified 1641.7305 0.73045002 3929 Q96MX6 WDR92 WD repeat-containing protein 92 yes yes 0 0 0 By MS/MS 10 0 1 1 48.96 49.683 2 0.034504 55130 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.502 28.812 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6799 3929 6211 57152 45310 45310 1 DDPVTNLNNAFEVAEK Unmodified 1774.8374 0.83735793 356 O43707 ACTN4 Alpha-actinin-4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.03 3.42 1 5 2 24 4 3 1 2 2 2 2 2 2 2 2 2 2 2 2 82.73 82.076 2;3 5.1078E-241 94387 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 238.07 225.11 5442200000 116130000 4143600000 8654800 22293000 27136000 88555000 31842000 36887000 31158000 115530000 147350000 138530000 40599000 109450000 384490000 6800 356 6212 57153;57154;57155;57156;57157;57158;57159;57160;57161;57162;57163;57164;57165;57166;57167;57168;57169;57170;57171;57172;57173;57174;57175;57176;57177;57178;57179;57180;57181;57182;57183;57184 45311;45312;45313;45314;45315;45316;45317;45318;45319;45320;45321;45322;45323;45324;45325;45326;45327;45328;45329;45330;45331;45332;45333;45334;45335;45336;45337;45338;45339;45340 45314 29 DDQDGAFTK Unmodified 995.4196 0.41960421 2348 Q13867 BLMH Bleomycin hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15.708 15.312 2 0.0076208 16430 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.629 89.946 487480000 11078000 15305000 0 52903000 30314000 39074000 33431000 54972000 26779000 38509000 27130000 71219000 41456000 26448000 18858000 6801 2348 6213 57185;57186;57187;57188;57189;57190;57191;57192;57193;57194;57195;57196;57197;57198 45341;45342;45343 45341 3 DDQFLLDGQLLPDNFIAACTEK Unmodified 2522.1999 0.19990496 929 P10768 ESD S-formylglutathione hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 1 4 1 98.42 93.975 2;3 2.852E-49 116823 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 162.41 142.83 213780000 15434000 193170000 5170700 0 0 0 0 0 0 0 0 0 0 0 0 6802 929 6214 57199;57200;57201;57202;57203;57204 45344;45345;45346;45347;45348;45349 45348 4 DDQLLDDGK Unmodified 1017.4615 0.46146903 2523 Q15370 TCEB2 Transcription elongation factor B polypeptide 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 30.519 29.425 2 0.00051001 34957 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.08 84.538 892040000 65306000 186980000 0 29315000 29948000 46386000 32266000 23329000 30884000 47283000 65236000 81377000 48452000 70815000 134460000 6803 2523 6215 57205;57206;57207;57208;57209;57210;57211;57212;57213;57214;57215;57216;57217;57218;57219;57220;57221 45350;45351;45352;45353;45354;45355;45356;45357;45358;45359;45360;45361;45362;45363;45364;45365;45366;45367;45368 45354 18 DDQPSAASSVNK Unmodified 1217.5524 0.5524093 3008 Q6ZS17 FAM65A Protein FAM65A yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.371 13.529 2 0.006118 12267 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.719 56.505 31791000 0 0 0 1178400 1289500 3736100 1618000 1709600 2081500 3641300 3143000 2649500 2904300 3214600 4625000 6804 3008 6216 57222;57223;57224;57225;57226;57227;57228;57229;57230;57231;57232;57233 45369;45370;45371 45370 3 DDQVFEAVGTTDELSSAIGFALELVTEK Unmodified 2983.455 0.45499325 3828 Q96EY8 MMAB Cob(I)yrinic acid a,c-diamide adenosyltransferase, mitochondrial yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 106.68 102.47 3 0.006931 126181 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 24.915 22.474 2659400 0 2659400 0 0 0 0 0 0 0 0 0 0 0 0 0 6805 3828 6217 57234;57235 45372 45372 1 DDQVTVIGAGVTLHEALAAAELLK Unmodified 2433.3115 0.31150432 1249 P29401 TKT Transketolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.542 1 10 4 7 6 2 101.15 97.097 2;3;4 1.0585E-68 95381 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 137.24 129.05 1131000000 827150000 293990000 9893100 0 0 0 0 0 0 0 0 0 0 0 0 6806 1249 6218 57236;57237;57238;57239;57240;57241;57242;57243;57244;57245;57246;57247;57248;57249;57250 45373;45374;45375;45376;45377;45378;45379;45380;45381;45382;45383;45384;45385 45380 13 DDRAESQASSLGQK Unmodified 1490.6961 0.69611342 1389 P37275 ZEB1 Zinc finger E-box-binding homeobox 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 17.882 17.445 3 0.00039518 21534 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 63.128 46.596 57718000 0 15610000 0 0 2448600 5722500 2500400 4019500 2327600 2928300 4422500 7362900 3771000 0 6604600 6807 1389 6219 57251;57252;57253;57254;57255;57256;57257;57258;57259;57260;57261;57262 45386;45387 45386 2 DDREAQSICER Unmodified 1377.5943 0.59429089 2178;1937 P63010;Q10567 AP2B1;AP1B1 AP-2 complex subunit beta;AP-1 complex subunit beta-1 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.444 16.623 3 0.0036169 16305 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 70.089 61.576 183850000 0 0 0 8967600 7241900 20127000 7587500 9063200 8561300 14919000 16163000 23254000 10318000 22153000 35490000 6808 1937;2178 6220 57263;57264;57265;57266;57267;57268;57269;57270;57271;57272;57273;57274 45388;45389;45390;45391;45392;45393;45394;45395;45396;45397;45398 45395 2 DDRGPPQRPK Unmodified 1164.6 0.59996862 1166 P23588 EIF4B Eukaryotic translation initiation factor 4B yes yes 0 0 2 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.9665 7.0901 3 0.025164 4530 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.029 68.259 678170000 0 0 0 22061000 16843000 16652000 29651000 22379000 23763000 49610000 146650000 67718000 46040000 88479000 148330000 6809 1166 6221 57275;57276;57277;57278;57279;57280;57281;57282;57283;57284;57285;57286 45399 45399 0 DDRVEERDPPR Unmodified 1382.6539 0.65385468 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 11.594 11.742 3 0.0057021 11125 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 80.312 64.772 316950000 0 0 0 16465000 17945000 20568000 15523000 19054000 16442000 28334000 13246000 48547000 34541000 27986000 58294000 6810 2378 6222 57287;57288;57289;57290;57291;57292;57293;57294;57295;57296;57297;57298 45400;45401;45402;45403 45400 1 DDRYFLSGSLDGK Unmodified 1471.6943 0.69432251 2734 Q5JSH3 WDR44 WD repeat-containing protein 44 yes yes 0 0 1 By matching By matching By MS/MS 10 0 3 1 1 1 65.783 66.172 3 0.026261 75025 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.285 24.83 17307000 0 0 0 0 0 0 0 0 0 0 0 4976100 0 2781300 9549400 6811 2734 6223 57299;57300;57301 45404 45404 1 DDSDNVRLASVILSLEVK Unmodified 1972.0477 0.047685059 2879 Q6GQQ9 OTUD7B OTU domain-containing protein 7B yes yes 0 0 1 By MS/MS 2 0 1 1 98.522 90.391 3 5.7085E-05 116618 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.007 72.048 8125600 8125600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6812 2879 6224 57302 45405 45405 1 DDSFDSLDSFGSR Unmodified 1446.5899 0.58991702 5054 Q9UPQ0 LIMCH1 LIM and calponin homology domains-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.949 73.995 2 4.1996E-08 85572 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 104.79 103.2 58156000 0 0 0 3926600 3232200 8642300 4144300 3919400 4586700 4255500 0 6798600 5193000 4236900 9220900 6813 5054 6225 57303;57304;57305;57306;57307;57308;57309;57310;57311;57312;57313;57314 45406;45407;45408;45409;45410;45411;45412;45413;45414;45415;45416;45417 45414 12 DDSFFGETSHNYHK Unmodified 1682.6961 0.69611342 1473 P43243 MATR3 Matrin-3 yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 42.125 42.679 3 0.032856 46764 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 29.355 28.037 23371000 0 0 0 0 0 0 0 0 0 5125800 0 7943300 0 0 10302000 6814 1473 6226 57315;57316;57317 45418 45418 1 DDSGATTMNIGSDK Unmodified 1410.5933 0.59328784 3927 Q96MW1 CCDC43 Coiled-coil domain-containing protein 43 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.35 1 5 1 1 1 1 1 1 47.651 48.275 2 6.1568E-19 35612 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 130.56 120.33 46156000 0 11608000 0 0 0 0 0 0 0 0 6702500 9066800 0 5358300 13421000 6815 3927 6227 57318;57319;57320;57321;57322;57323 45419;45420;45421;45422;45423;45424 45420 6 DDSGATTMNIGSDK Oxidation (M) 1426.5882 0.58820246 3927 Q96MW1 CCDC43 Coiled-coil domain-containing protein 43 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 6.75 4.21 2 1 5 2 1 1 1 1 1 1 52.689 54.052 2 1.0371E-66 99159 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 202.31 183.97 40709000 14327000 20084000 0 0 0 0 1475800 0 0 1893200 2928900 0 0 0 0 6816 3927 6227 57324;57325;57326;57327;57328;57329;57330;57331 45425;45426;45427;45428;45429;45430 45429 5420 6 DDSIEGIYDTLK Unmodified 1367.6456 0.64564098 1171 P23921 RRM1 Ribonucleoside-diphosphate reductase large subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 82.206 80.94 2 7.5587E-13 99986 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 129.16 121.33 2908000000 335870000 2087800000 7316700 10597000 19436000 50242000 19916000 30276000 20600000 49918000 45868000 39716000 22356000 41417000 126650000 6817 1171 6228 57332;57333;57334;57335;57336;57337;57338;57339;57340;57341;57342;57343;57344;57345;57346;57347;57348 45431;45432;45433;45434;45435;45436;45437;45438;45439;45440;45441;45442;45443;45444;45445;45446;45447;45448;45449;45450;45451;45452 45443 22 DDSIISSLDVTDIAPSRK Unmodified 1930.9848 0.98475045 2287 Q13426 XRCC4 DNA repair protein XRCC4 yes yes 0 0 1 By MS/MS By matching By matching By MS/MS 8 3.46 1 3 1 1 1 1 83.33 82.869 3 5.2789E-08 95683 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.548 65.76 18421000 0 0 1669600 0 0 0 0 1170000 0 0 3009300 0 0 0 12572000 6818 2287 6229 57349;57350;57351;57352 45453;45454;45455 45453 3 DDSILSVTVDGK Unmodified 1247.6245 0.62451161 4963 Q9UKF6 CPSF3 Cleavage and polyadenylation specificity factor subunit 3 yes yes 0 0 0 By MS/MS 2 0 1 1 75.04 70.1 2 0.0040865 87668 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.488 63.55 49133000 0 49133000 0 0 0 0 0 0 0 0 0 0 0 0 0 6819 4963 6230 57353 45456;45457 45456 2 DDSLAVWNALEK Unmodified 1359.667 0.66704513 481 O75342 ALOX12B Arachidonate 12-lipoxygenase, 12R-type yes yes 0 0 0 By MS/MS 10 0 1 1 85.24 84.856 2 0.016046 98589 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 42.718 30.87 3112800 0 0 0 3112800 0 0 0 0 0 0 0 0 0 0 0 6820 481 6231 57354 45458 45458 1 DDSNHTIGVEFGSK Unmodified 1504.6794 0.67940073 1103 P20338 RAB4A Ras-related protein Rab-4A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.21 2.31 1 1 17 2 1 1 1 1 2 1 2 2 1 2 1 2 48.762 48.398 2;3 6.8618E-05 58820 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 85.909 80.732 526920000 0 135540000 0 16675000 14142000 27627000 20764000 31876000 20902000 38033000 45523000 45900000 30411000 30658000 68866000 6821 1103 6232 57355;57356;57357;57358;57359;57360;57361;57362;57363;57364;57365;57366;57367;57368;57369;57370;57371;57372;57373 45459;45460;45461;45462;45463;45464;45465;45466;45467;45468;45469;45470;45471;45472;45473;45474 45467 16 DDSPDLPK Unmodified 885.40798 0.40797689 65 CON__P02769 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.148 27.346 2 0.0087284 29167 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 85.212 49.718 + 1846100000 0 0 0 208150000 248080000 112890000 130430000 90109000 116490000 237770000 208990000 154690000 112180000 86696000 139670000 6822 65 6233 57374;57375;57376;57377;57378;57379;57380;57381;57382;57383;57384;57385 45475;45476;45477;45478;45479;45480;45481;45482;45483;45484;45485 45480 7 DDSPSYLPTK Unmodified 1121.5241 0.52406928 3193 Q86XA9 HEATR5A HEAT repeat-containing protein 5A yes yes 0 0 0 By MS/MS By MS/MS By matching By matching 10 0 4 1 1 1 1 41.987 42.313 2 0.011715 47540 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 53.751 35.765 10192000 0 0 0 0 0 2236300 0 0 0 3306200 0 2362800 2287200 0 0 6823 3193 6234 57386;57387;57388;57389 45486 45486 1 DDSTKPKPEEEVK Unmodified 1500.7308 0.7307676 2822 Q5VW32 BROX BRO1 domain-containing protein BROX yes yes 0 0 2 By MS/MS 3 0 1 1 14.065 10.598 3 0.015155 13454 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 63.181 35.851 13458000 0 13458000 0 0 0 0 0 0 0 0 0 0 0 0 0 6824 2822 6235 57390 45487 45487 0 DDSVRPNMTLK Unmodified 1274.6289 0.62888548 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.853 39.034 3 0.0028639 42275 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 72.652 62.965 332430000 0 0 0 16041000 23503000 20052000 20200000 24955000 17827000 33542000 36992000 43638000 30282000 29646000 35757000 6825 3023 6236 57391;57392;57393;57394;57395;57396;57397;57398;57399;57400;57401;57402 45488;45489;45490;45491;45492;45493;45494;45495;45496;45497 45493 5 DDSVRPNMTLK Oxidation (M) 1290.6238 0.6238001 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 1 1 By MS/MS By MS/MS By matching By matching 10 0 4 1 1 1 1 21.684 22.059 2 0.004431 22565 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 88.681 40.398 20294000 0 0 0 0 0 0 0 0 0 3372000 0 7806100 5697300 3418700 0 6826 3023 6236 57403;57404;57405;57406 45498 45498 4623 1 DDTDDEIAK Unmodified 1020.4247 0.42474917 1227 P27824 CANX Calnexin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.71 3.15 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27.335 27.914 2 0.0032698 13823 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 93.162 40.526 245100000 26454000 39621000 0 11426000 16540000 14235000 13393000 13355000 10953000 17092000 17174000 20649000 13904000 11039000 19269000 6827 1227 6237 57407;57408;57409;57410;57411;57412;57413;57414;57415;57416;57417;57418;57419;57420 45499;45500;45501;45502;45503;45504;45505;45506;45507;45508;45509;45510;45511 45499 12 DDTDPGQLK Unmodified 987.4509 0.45090434 379 O43913 ORC5 Origin recognition complex subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 18.66 18.601 2 0.018501 18880 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 54.776 44.309 64177000 0 0 0 14120000 18592000 0 15180000 0 16285000 0 0 0 0 0 0 6828 379 6238 57421;57422;57423;57424;57425;57426 45512;45513;45514;45515;45516;45517 45517 6 DDTSRYDERPGPSPLPHR Unmodified 2093.9879 0.98787877 868 P08621 SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 35.998 36.396 4 0.040956 39138 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 25.198 19.062 53585000 0 0 0 0 0 0 0 7195800 6000600 7479700 7783200 12452000 0 0 12675000 6829 868 6239 57427;57428;57429;57430;57431;57432 45518 45518 1 DDVAPESGDTTVK Unmodified 1332.6045 0.60450445 571 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.329 24.54 2 0.00067523 25611 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 73.499 65.854 108310000 0 0 0 8352300 6717900 7990600 6618200 7709600 0 9457100 10679000 12004000 12593000 10630000 15560000 6830 571 6240 57433;57434;57435;57436;57437;57438;57439;57440;57441;57442;57443;57444 45519;45520;45521;45522;45523;45524;45525;45526;45527;45528;45529 45525 11 DDVAQTDLLQIDPNFGSK Unmodified 1974.9535 0.95345032 860 P08195 SLC3A2 4F2 cell-surface antigen heavy chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.64 2.92 3 2 23 1 4 1 2 2 2 2 2 2 2 2 2 2 2 86.421 85.624 2;3 7.1407E-107 104570 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 261.35 261.35 639900000 6702800 301910000 0 3410300 22755000 21290000 13593000 23224000 27291000 35850000 30334000 50049000 20791000 27338000 55362000 6831 860 6241 57445;57446;57447;57448;57449;57450;57451;57452;57453;57454;57455;57456;57457;57458;57459;57460;57461;57462;57463;57464;57465;57466;57467;57468;57469;57470;57471;57472 45530;45531;45532;45533;45534;45535;45536;45537;45538;45539;45540;45541;45542;45543;45544;45545;45546;45547;45548;45549;45550;45551;45552;45553;45554;45555 45536 21 DDVAQWLK Unmodified 973.4869 0.48689592 1432 P41212 ETV6 Transcription factor ETV6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 69.097 69.19 2 0.044838 79766 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 48.756 24.569 14130000 0 0 0 0 1305800 1676600 0 1311100 994770 1734900 0 0 2559100 1512100 3035600 6832 1432 6242 57473;57474;57475;57476;57477;57478;57479;57480 45556 45556 1 DDVDNSK Unmodified 791.32973 0.32972657 3615 Q92538 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 0 0 0 By MS/MS 1 0 1 1 106.14 111.4 2 0.030767 92059 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 91.906 37.381 9813000 9813000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6833 3615 6243 57481 45557 45557 1 DDVDVALLPTIVEK Unmodified 1525.8239 0.8239397 5229 Q9Y5B6 PAXBP1 PAX3- and PAX7-binding protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 92.191 88.126 2 0.0014824 109436 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.87 72.368 29457000 0 29457000 0 0 0 0 0 0 0 0 0 0 0 0 0 6834 5229 6244 57482;57483 45558 45558 1 DDVFLSVPCILGQNGISDLVK Unmodified 2288.1722 0.17223365 719 P00338 LDHA L-lactate dehydrogenase A chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.5 0.5 3 3 1 4 1 99.803 96.1 2;3 2.6635E-10 118241 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.47 104.44 1430100000 1815200 1404200000 24044000 0 0 0 0 0 0 0 0 0 0 0 0 6835 719 6245 57484;57485;57486;57487;57488;57489 45559;45560;45561;45562;45563;45564;45565;45566;45567;45568;45569 45559 10 DDVIEECNK Unmodified 1120.4707 0.47065351 2410 Q14498 RBM39 RNA-binding protein 39 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.625 20.83 2 0.0033925 20220 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 94.114 87.884 210830000 0 0 0 8681500 9499100 20572000 12424000 9513400 12239000 17189000 23326000 20731000 23545000 25588000 27521000 6836 2410 6246 57490;57491;57492;57493;57494;57495;57496;57497;57498;57499;57500;57501 45570;45571;45572;45573;45574;45575;45576;45577;45578;45579;45580;45581;45582;45583;45584 45579 14 DDVLTVIR Unmodified 929.5182 0.51819605 3112 Q7Z6J0 SH3RF1 E3 ubiquitin-protein ligase SH3RF1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.848 65.934 2 0.011381 74562 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.058 52.059 94809000 0 0 0 5364200 5661300 7784100 6223700 6210300 6169200 9177500 9657400 10520000 7839400 8586500 11616000 6837 3112 6247 57502;57503;57504;57505;57506;57507;57508;57509;57510;57511;57512;57513 45585;45586;45587;45588;45589;45590;45591;45592;45593;45594 45587 10 DDVNILLDK Unmodified 1043.5499 0.5498901 3256 Q8IX90 SKA3 Spindle and kinetochore-associated protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 66.812 66.174 2 0.010625 76244 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 64.04 32.106 45471000 196080 16018000 0 0 2583600 0 0 3941600 3367200 5999600 6498100 6867400 0 0 0 6838 3256 6248 57514;57515;57516;57517;57518;57519;57520;57521;57522;57523 45595;45596;45597;45598;45599;45600;45601 45595 7 DDVSISVEEGK Unmodified 1176.551 0.55101232 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.21 3.43 1 2 11 2 1 1 1 1 1 1 1 1 1 1 1 1 46.521 46.228 2 3.0034E-16 92626 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 185.6 151.21 275560000 166520000 38458000 0 0 2064300 6643900 2500100 2369700 3603900 12163000 8469800 5609500 6841500 7391500 12925000 6839 848 6249 57524;57525;57526;57527;57528;57529;57530;57531;57532;57533;57534;57535;57536;57537 45602;45603;45604;45605;45606;45607;45608 45605 5 DDVSTFPLIAAR Unmodified 1303.6772 0.67721588 3121 Q7Z7C8 TAF8 Transcription initiation factor TFIID subunit 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 82.12 82.182 2 0.001751 95305 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 65.305 42.565 32350000 0 0 0 1290900 1714900 0 2717200 2732400 1409600 0 3778000 4307300 2385600 2466800 9547100 6840 3121 6250 57538;57539;57540;57541;57542;57543;57544;57545;57546;57547 45609;45610;45611;45612;45613;45614;45615 45614 7 DDVTALHCK Unmodified 1057.4862 0.48624399 578 O76094 SRP72 Signal recognition particle subunit SRP72 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 19.386 18.583 2 0.006387 18637 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 75.213 62.224 129770000 5531300 72629000 1523600 3533100 3401300 2954800 3643600 4233400 3466600 4876700 4595000 5095800 4821600 3488800 5980000 6841 578 6251 57548;57549;57550;57551;57552;57553;57554;57555;57556;57557;57558;57559;57560;57561;57562;57563 45616;45617;45618;45619;45620;45621;45622;45623;45624 45620 9 DDVTSSTGPHK Unmodified 1142.5204 0.52038089 2768 Q5T1M5 FKBP15 FK506-binding protein 15 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 7.69 3.47 2 2 9 4 1 1 1 1 1 1 1 1 1 7.3464 6.3934 2;3 0.00033688 6937 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.015 86.01 119210000 0 106060000 0 947520 1060900 1189100 1136900 2197300 0 0 0 1224000 1701100 1564200 2130400 6842 2768 6252 57564;57565;57566;57567;57568;57569;57570;57571;57572;57573;57574;57575;57576 45625;45626;45627 45626 1 DDVVLPALHFHQGDSK Unmodified 1776.8795 0.87949752 3485 Q8TC07 TBC1D15 TBC1 domain family member 15 yes yes 0 0 0 By MS/MS 2 0 1 1 79.411 74.675 3 2.3993E-16 93026 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.59 98.404 94066000 0 94066000 0 0 0 0 0 0 0 0 0 0 0 0 0 6843 3485 6253 57577 45628 45628 1 DDVVTFIDAK Unmodified 1121.5605 0.56045479 3887 Q96J01 THOC3 THO complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73.249 72.243 2 0.0021904 82782 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 85.731 70.58 333210000 24824000 147220000 1606600 6768000 8446400 14612000 7605700 9109100 7963800 13449000 17671000 22190000 14419000 15984000 21344000 6844 3887 6254 57578;57579;57580;57581;57582;57583;57584;57585;57586;57587;57588;57589;57590;57591;57592 45629;45630;45631;45632;45633;45634;45635;45636;45637;45638;45639;45640;45641;45642;45643 45639 13 DDVYEAFMK Unmodified 1116.4798 0.47976163 5123 Q9Y2W2 WBP11 WW domain-binding protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 73.45 72.399 2 0.021188 84475 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 52.482 43.719 227440000 5459500 114840000 0 7869700 10437000 7867400 8630900 9429100 6087300 7257000 10018000 12460000 6792300 7730200 12556000 6845 5123 6255 57593;57594;57595;57596;57597;57598;57599;57600;57601;57602;57603;57604;57605;57606;57607 45644;45645;45646;45647;45648;45649;45650;45651 45650 8 DDVYEAFMK Oxidation (M) 1132.4747 0.47467625 5123 Q9Y2W2 WBP11 WW domain-binding protein 11 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 57.287 51.945 2 0.011525 66905 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.206 76.567 59475000 0 59475000 0 0 0 0 0 0 0 0 0 0 0 0 0 6846 5123 6255 57608;57609 45652 45652 6510 1 DDYALGER Unmodified 937.41412 0.4141249 4178 Q9BV68 RNF126 E3 ubiquitin-protein ligase RNF126 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 28.99 29.143 2 0.023017 31313 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 60.682 28.746 105020000 0 0 0 0 7524000 0 13006000 11654000 12809000 0 22049000 0 17742000 20231000 0 6847 4178 6256 57610;57611;57612;57613;57614;57615;57616 45653;45654;45655;45656;45657 45654 5 DDYELIDVLVNNAK Unmodified 1619.8043 0.80426689 2947 Q6PGP7 TTC37 Tetratricopeptide repeat protein 37 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 6 4 2 2 2 1 1 96.478 92.455 2;3 0.0016012 115530 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 103.34 83.683 19283000 17699000 0 0 0 0 634900 0 0 0 0 0 0 0 0 949110 6848 2947 6257 57617;57618;57619;57620 45658;45659;45660 45659 3 DDYGFSGSQK Unmodified 1102.4567 0.456718 4393 Q9H4A3 WNK1 Serine/threonine-protein kinase WNK1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.907 28.105 2 0.00026432 30046 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 140.35 135.6 232740000 0 0 0 10068000 13960000 17944000 18293000 17096000 17137000 16747000 24013000 23022000 18677000 24990000 30791000 6849 4393 6258 57621;57622;57623;57624;57625;57626;57627;57628;57629;57630;57631;57632 45661;45662;45663;45664;45665;45666;45667;45668;45669;45670;45671;45672;45673 45667 12 DDYPSSPPK Unmodified 1004.4451 0.44509068 1952 P63279 UBE2I SUMO-conjugating enzyme UBC9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.21 3.43 1 2 11 2 1 1 1 1 1 1 1 1 1 1 1 1 29.03 28.937 2 0.014026 92578 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 82.452 66.159 644630000 373650000 29290000 0 0 8377000 13630000 11952000 10574000 9715600 19993000 28220000 31478000 23760000 29341000 54650000 6850 1952 6259 57633;57634;57635;57636;57637;57638;57639;57640;57641;57642;57643;57644;57645;57646 45674;45675;45676;45677 45676 3 DDYSTAQRVTYK Unmodified 1445.6787 0.67867245 2743 Q5JVF3 PCID2 PCI domain-containing protein 2 yes yes 0 0 1 By MS/MS 2.67 0.471 1 2 3 33.471 28.893 2;3 1.8897E-13 37631 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 147.74 116.32 68254000 0 68254000 0 0 0 0 0 0 0 0 0 0 0 0 0 6851 2743 6260 57647;57648;57649 45678;45679 45678 2 DDYTIPDEYR Unmodified 1285.5463 0.54626129 1473 P43243 MATR3 Matrin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 57.204 57.324 2 0.001426 64913 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 102.61 90.761 563260000 0 0 0 24557000 26195000 53433000 50095000 35002000 43557000 41351000 46581000 60748000 45170000 48119000 88446000 6852 1473 6261 57650;57651;57652;57653;57654;57655;57656;57657;57658;57659;57660;57661 45680;45681;45682;45683;45684;45685;45686;45687;45688;45689;45690;45691;45692;45693;45694 45687 15 DEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAK Unmodified 3879.6903 0.69031894 1256 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.77 2 1 23 2 1 2 2 2 2 2 2 2 2 2 1 2 2 71.484 71.471 3;4 2.1287E-118 78432 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 102.88 101.34 481770000 26856000 42256000 0 6875800 31491000 17414000 14634000 23574000 21128000 72455000 73288000 59118000 6624600 30801000 55260000 6853 1256 6262 57662;57663;57664;57665;57666;57667;57668;57669;57670;57671;57672;57673;57674;57675;57676;57677;57678;57679;57680;57681;57682;57683;57684;57685;57686;57687 45695;45696;45697;45698;45699;45700;45701;45702;45703;45704;45705;45706;45707;45708;45709;45710;45711;45712;45713;45714;45715;45716;45717;45718;45719;45720;45721;45722;45723;45724;45725 45703 31 DEAAVHQDGKPR Unmodified 1321.6375 0.63747633 4793 Q9P0K8 FOXJ2 Forkhead box protein J2 yes yes 0 0 1 By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 6.3117 6.4249 3 0.00064776 4172 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 61.375 49.644 76221000 0 0 0 6856800 7535700 4617700 11207000 9279400 5552500 4891500 9713800 0 7598100 0 8968700 6854 4793 6263 57688;57689;57690;57691;57692;57693;57694;57695;57696;57697 45726;45727;45728;45729 45726 3 DEAAYGELR Unmodified 1022.4669 0.46688876 4987 Q9UL46 PSME2 Proteasome activator complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 34.84 35.021 2 0.032584 38595 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 67.993 40.468 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6855 4987 6264 57698;57699 45730;45731 45730 2 DEAEALYQTK Unmodified 1166.5455 0.54553301 103 CON__Q7Z794;Q7Z794 KRT77 Keratin, type II cytoskeletal 1b no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.049 37.23 2 6.5938E-06 41482 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 148.52 137.03 + 180050000 0 0 0 49914000 9516500 17191000 9009000 7688800 9755000 17139000 10259000 11796000 20147000 10603000 7032900 6856 103 6265 57700;57701;57702;57703;57704;57705;57706;57707;57708;57709;57710;57711 45732;45733;45734;45735;45736;45737;45738;45739;45740;45741;45742;45743 45732 12 DEAEQYRK Unmodified 1037.4778 0.47778779 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 7.3605 4.277 2 0.02969 6075 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 104.37 83.667 159490000 9481700 145110000 4903400 0 0 0 0 0 0 0 0 0 0 0 0 6857 516 6266 57712;57713;57714;57715 45744;45745 45744 1 DEALEDEDNK Unmodified 1176.4782 0.4782413 1099 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.88 2.98 1 7 1 1 1 1 1 1 1 1 26.001 26.851 2 9.716E-06 92121 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 131.41 115.26 47637000 19076000 0 0 0 0 4315300 2349300 0 2755900 0 4300100 0 1864000 3712700 9263500 6858 1099 6267 57716;57717;57718;57719;57720;57721;57722;57723 45746;45747;45748;45749;45750;45751 45749 6 DEALEDEDNKK Unmodified 1304.5732 0.57320432 1099 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 4 2 24 2 4 3 1 2 2 2 2 2 1 3 2 2 2 10.609 10.01 2;3 1.8877E-08 11015 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 127.4 89.311 455700000 15673000 338900000 0 7941100 891500 6270100 8116700 2510800 8076800 7348200 8076500 16769000 9984700 6561100 18588000 6859 1099 6268 57724;57725;57726;57727;57728;57729;57730;57731;57732;57733;57734;57735;57736;57737;57738;57739;57740;57741;57742;57743;57744;57745;57746;57747;57748;57749;57750;57751;57752;57753 45752;45753;45754;45755;45756;45757;45758;45759;45760;45761;45762;45763 45755 7 DEALQNISADDLPDSASQAAHPQDSAFSYR Unmodified 3218.4388 0.43884269 2463 Q14C86 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 78.569 78.638 3 1.0032E-145 90620 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 161.72 151.75 48897000 0 0 0 0 2040900 6063900 0 4339200 0 9864900 0 8308700 0 0 18279000 6860 2463 6269 57754;57755;57756;57757;57758;57759 45764;45765;45766;45767;45768 45766 5 DEAMAIGGHWSPSLDGPDPEK Oxidation (M) 2223.9743 0.97426212 3255 Q8IX12 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 70.419 70.412 3 4.8652E-07 80990 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 64.203 54.673 29317000 0 0 0 2199700 0 9389600 0 4511700 8700400 0 4515500 0 0 0 0 6861 3255 6270 57760;57761;57762;57763;57764 45769;45770;45771;45772;45773 45769 4863 4 DEAMAIGGHWSPSLDGPDPEK Unmodified 2207.9793 0.9793475 3255 Q8IX12 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 8.25 3.03 1 3 1 1 1 1 77.03 76.315 3 1.4486E-06 87887 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.936 42.134 35225000 0 7513300 0 0 0 0 0 0 0 3624800 0 0 0 4834300 19253000 6862 3255 6270 57765;57766;57767;57768 45774;45775;45776;45777 45774 4 DEAQNEGPATESEAPLK Unmodified 1784.8065 0.80645173 3308 Q8N163 CCAR2 Cell cycle and apoptosis regulator protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.88 3.69 2 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 48.217 48.323 2 2.7963E-60 43437 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 165.7 151.79 348260000 27750000 5968600 0 16993000 14074000 33697000 16349000 11647000 22118000 29687000 32933000 33930000 32164000 26459000 44493000 6863 3308 6271 57769;57770;57771;57772;57773;57774;57775;57776;57777;57778;57779;57780;57781;57782;57783;57784 45778;45779;45780;45781;45782;45783;45784;45785;45786;45787;45788;45789;45790;45791;45792;45793;45794 45778 17 DEASLPDCSSSR Unmodified 1322.5409 0.54085834 4995 Q9ULH7 MKL2 MKL/myocardin-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 26.725 27.34 2 2.4923E-05 28269 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.111 73.324 14499000 0 0 0 0 0 0 0 0 0 0 3877000 2877600 0 0 7744000 6864 4995 6272 57785;57786;57787;57788;57789;57790 45795;45796;45797;45798;45799 45797 5 DEASLPDCSSSRQPIPVASHAVGQPVSTGGQTLVAK Unmodified 3645.8057 0.80568723 4995 Q9ULH7 MKL2 MKL/myocardin-like protein 2 yes yes 0 0 1 By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 71.68 71.781 4 5.3018E-10 82093 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.467 25.956 35218000 0 0 0 0 3462500 3885000 0 0 3319400 5579900 0 5268700 0 4366600 9335800 6865 4995 6273 57791;57792;57793;57794;57795;57796;57797 45800;45801 45800 2 DEATAAVIDLNDRPIGSR Unmodified 1911.965 0.96501806 4639 Q9NTZ6 RBM12 RNA-binding protein 12 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 70.87 70.984 3 4.5921E-11 81005 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.287 77.123 44296000 0 0 0 2077500 0 4022600 2978600 0 2141100 2812300 5772500 3270500 4120100 4943100 12157000 6866 4639 6274 57798;57799;57800;57801;57802;57803;57804;57805;57806;57807 45802;45803;45804;45805;45806;45807;45808;45809;45810;45811 45805 10 DEATAAVIDLNDRPIGSRK Unmodified 2040.06 0.05998108 4639 Q9NTZ6 RBM12 RNA-binding protein 12 yes yes 0 0 2 By matching By MS/MS 10 0 2 1 1 61.844 62.204 3 0.0051641 70299 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.537 39.749 10303000 0 0 0 0 0 0 0 0 0 2116100 0 0 0 0 8186900 6867 4639 6275 57808;57809 45812 45812 1 DEATLQAMDEK Unmodified 1249.5496 0.54963211 2633 Q16773 CCBL1 Kynurenine--oxoglutarate transaminase 1 yes yes 0 0 0 By MS/MS 2 0 1 1 42.635 35.899 2 0.018585 49492 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.557 52.224 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6868 2633 6276 57810 45813 45813 1 DEAVGALHLIQAAK Unmodified 1434.7831 0.78307794 5075 Q9Y223 GNE Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase;UDP-N-acetylglucosamine 2-epimerase (hydrolyzing);N-acetylmannosamine kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.46 3.84 4 2 7 4 2 1 1 1 1 1 1 1 76.27 74.699 2;3 0.00033989 85790 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 53.001 42.949 363650000 0 208270000 97453000 0 0 5794600 0 0 2823200 5878700 9158700 8299100 0 5946300 20033000 6869 5075 6277 57811;57812;57813;57814;57815;57816;57817;57818;57819;57820;57821;57822;57823 45814;45815;45816;45817;45818;45819;45820;45821;45822;45823;45824;45825;45826 45822 12 DECAMISTSIGEEFELPISSATTIK Unmodified 2728.2823 0.28231396 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 97.301 93.992 3 0.00013612 115813 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 49.638 38.221 2974100 0 2974100 0 0 0 0 0 0 0 0 0 0 0 0 0 6870 3443 6278 57824;57825 45827;45828 45827 2 DECNVVEVVAR Unmodified 1288.6082 0.60815004 523 O75607 NPM3 Nucleoplasmin-3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.592 58.706 2 0.00026237 66859 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 105.2 93.148 98856000 0 0 0 5128500 4762800 5367700 5428600 5799900 5576300 6762500 13963000 10752000 11188000 8739800 15387000 6871 523 6279 57826;57827;57828;57829;57830;57831;57832;57833;57834;57835;57836;57837 45829;45830;45831;45832;45833;45834;45835;45836;45837;45838 45837 10 DECNVVEVVARNHDHQEIAVPVANLK Unmodified 2954.4669 0.46685254 523 O75607 NPM3 Nucleoplasmin-3 yes yes 0 0 1 By MS/MS 2 0 1 1 84.728 76.598 4 0.025459 99985 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 23.284 17.491 24485000 24485000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6872 523 6280 57838 45839 45839 1 DEDEEDEEDKEEDEEEDVPGQAK Unmodified 2707.0264 0.026412667 1225 P27797 CALR Calreticulin yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 34.46 34.242 3 0.000704 38078 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 34.65 34.24 15016000 0 0 0 10047000 0 4969100 0 0 0 0 0 0 0 0 0 6873 1225 6281 57839;57840 45840 45840 1 DEDLLEQKPVTSAEQESEK Unmodified 2174.0227 0.0226521 3037 Q76L83 ASXL2 Putative Polycomb group protein ASXL2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.55 1 1 4 2 1 1 1 1 55.319 53.771 3 0.001065 61480 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 33.142 24.433 35465000 0 14241000 0 0 0 5805200 0 0 0 0 5438800 5476400 4503700 0 0 6874 3037 6282 57841;57842;57843;57844;57845;57846 45841;45842;45843;45844;45845;45846 45844 6 DEDLTQDYEEWK Unmodified 1569.6471 0.64709755 5241 Q9Y5N6 ORC6 Origin recognition complex subunit 6 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 68.558 68.799 2 2.3853E-05 78461 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 108.43 99.533 32901000 0 0 0 0 0 7227700 0 0 4019800 0 7988800 4618900 3453100 0 5592600 6875 5241 6283 57847;57848;57849;57850;57851;57852;57853 45847;45848;45849;45850;45851 45849 5 DEDPYVRK Unmodified 1020.4876 0.4876242 2178;1937 P63010;Q10567 AP2B1;AP1B1 AP-2 complex subunit beta;AP-1 complex subunit beta-1 no no 0 0 1 By matching By MS/MS By MS/MS 2 0 3 1 1 1 15.677 12.391 2 0.0058383 16017 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 154.01 126.88 133420000 14213000 114820000 4380500 0 0 0 0 0 0 0 0 0 0 0 0 6876 1937;2178 6284 57854;57855;57856 45852;45853 45852 2 DEDSAEALLK Unmodified 1089.519 0.51898391 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 52.947 51.079 2 0.010483 58155 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.827 54.867 83606000 10663000 36723000 0 0 3121500 0 0 0 4767800 6236800 7908300 0 0 0 14185000 6877 2344 6285 57857;57858;57859;57860;57861;57862;57863;57864 45854;45855;45856;45857;45858;45859 45859 6 DEDVLQK Unmodified 845.41306 0.41306227 4756 Q9NZ01 TECR Very-long-chain enoyl-CoA reductase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 19.742 19.818 2 0.029815 20177 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 75.311 22.628 87410000 0 0 0 9259800 7608900 8484900 8507100 11960000 8295900 11997000 0 0 11442000 9854100 0 6878 4756 6286 57865;57866;57867;57868;57869;57870;57871;57872;57873 45860;45861 45861 1 DEEADNDNYEVLFNLEELK Unmodified 2298.0176 0.017566722 2685 Q4J6C6 PREPL Prolyl endopeptidase-like yes yes 0 0 0 By MS/MS By MS/MS 3 0 2 1 1 96.081 92.69 2 0.010538 111200 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 49.12 43.842 2495400 686560 1808900 0 0 0 0 0 0 0 0 0 0 0 0 0 6879 2685 6287 57874;57875 45862 45862 1 DEEEEEASGLK Unmodified 1234.5201 0.52010612 2895 Q6N069 NAA16 N-alpha-acetyltransferase 16, NatA auxiliary subunit yes yes 0 0 0 By MS/MS 10 0 1 1 22.695 23.368 2 0.0040546 24094 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.985 30.177 3033800 0 0 0 0 0 0 0 0 0 0 0 3033800 0 0 0 6880 2895 6288 57876 45863 45863 1 DEEEKKDEEK Unmodified 1277.5623 0.56230528 5311 yes yes 0 0 2 By MS/MS By matching 10 0 2 1 1 19.593 19.836 3 0.033934 20610 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 61.161 25.62 + 2474100 0 0 0 0 0 0 0 0 0 1700300 0 0 773780 0 0 6881 5311 6289 57877;57878 45864 45864 0 DEEETVTTK Unmodified 1050.4717 0.47169936 2428 Q14677 CLINT1 Clathrin interactor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 11.384 11.52 2 0.0094522 9692 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.692 36.507 15941000 0 0 0 0 753070 3239800 0 0 3141900 1408000 0 0 3312500 1536300 2549900 6882 2428 6290 57879;57880;57881;57882;57883;57884;57885;57886 45865;45866;45867;45868;45869 45867 5 DEEFPEQK Unmodified 1020.44 0.4400053 1073 P18206 VCL Vinculin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.94 3.58 1 3 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30.256 29.947 2 0.0042848 26761 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 111.65 103.96 271720000 85034000 23075000 1497800 6077800 3128600 15633000 5847000 3988400 5842000 8596300 14416000 17518000 11359000 14001000 55704000 6883 1073 6291 57887;57888;57889;57890;57891;57892;57893;57894;57895;57896;57897;57898;57899;57900;57901;57902 45870;45871;45872;45873;45874;45875;45876;45877;45878;45879;45880;45881;45882;45883;45884;45885 45870 16 DEEINQQSQLVEK Unmodified 1558.7475 0.74748029 1328 P33176 KIF5B Kinesin-1 heavy chain yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 40.071 40.153 2 0.0011692 44832 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 84.658 73.446 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6884 1328 6292 57903;57904 45886;45887 45886 2 DEEISAAAIK Unmodified 1045.5292 0.52915466 455 O75116 ROCK2 Rho-associated protein kinase 2 yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 43.291 43.328 2 0.0016376 47313 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 89.698 49.43 70920000 0 0 0 6622900 4343500 8495200 6863500 6074900 0 0 12811000 0 14964000 10746000 0 6885 455 6293 57905;57906;57907;57908;57909;57910;57911;57912;57913;57914 45888;45889;45890;45891;45892;45893 45892 6 DEELDPMDPSSYSDAPR Unmodified 1922.784 0.78400173 435 O60828 PQBP1 Polyglutamine-binding protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 72.179 72.581 2 0.00092965 82994 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.877 70.729 7089600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7089600 6886 435 6294 57915 45894 45894 1 DEELDPMDPSSYSDAPR Oxidation (M) 1938.7789 0.77891636 435 O60828 PQBP1 Polyglutamine-binding protein 1 yes yes 0 1 0 By matching By MS/MS 10 0 2 1 1 55.924 55.747 2 0.00053466 63136 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 54.143 40.716 3795400 0 0 0 0 1671600 0 0 0 2123900 0 0 0 0 0 0 6887 435 6294 57916;57917 45895 45895 558 1 DEELFPLQVVMK Oxidation (M) 1462.7378 0.73776723 2652 Q2M389 KIAA1033 WASH complex subunit 7 yes yes 0 1 0 By MS/MS 10 0 1 1 87.271 87.322 2 0.007969 101202 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 44.719 27.806 1606900 0 0 0 0 0 1606900 0 0 0 0 0 0 0 0 0 6888 2652 6295 57918 45896 45896 4316 1 DEELFPLQVVMK Unmodified 1446.7429 0.74285261 2652 Q2M389 KIAA1033 WASH complex subunit 7 yes yes 0 0 0 By MS/MS 2 0 1 1 97.761 92.987 2 0.00012338 115097 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.66 53.594 50021000 0 50021000 0 0 0 0 0 0 0 0 0 0 0 0 0 6889 2652 6295 57919 45897 45897 0 DEELSSALEK Unmodified 1119.5295 0.52954859 4063 Q99816 TSG101 Tumor susceptibility gene 101 protein yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 44.359 44.409 2 0.0018498 49922 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 96.331 70.226 6327300 0 0 0 0 0 6327300 0 0 0 0 0 0 0 0 0 6890 4063 6296 57920;57921 45898;45899 45898 2 DEEMIGPIIDK Unmodified 1258.6115 0.61150408 4636 Q9NTK5 OLA1 Obg-like ATPase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 2 2 1 1 1 1 1 1 1 1 1 1 1 72.104 71.074 2 0.00034496 89725 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 108.57 99.657 652690000 31358000 550350000 0 3130400 0 11448000 2118100 3396900 2400200 6967100 9219700 7520000 2852900 5600100 16321000 6891 4636 6297 57922;57923;57924;57925;57926;57927;57928;57929;57930;57931;57932;57933;57934;57935;57936 45900;45901;45902;45903;45904;45905;45906 45905 7 DEEMIGPIIDK Oxidation (M) 1274.6064 0.60641871 4636 Q9NTK5 OLA1 Obg-like ATPase 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 59.386 57.089 2 0.0059403 73893 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.349 59.986 263050000 21938000 215840000 0 4928500 0 0 7169500 0 0 0 7121500 6049600 0 0 0 6892 4636 6297 57937;57938;57939;57940;57941;57942;57943;57944 45907;45908;45909;45910;45911 45910 6041 5 DEENDALLGGPAQLTDEEK Unmodified 2042.928 0.92802343 895 P09884 POLA1 DNA polymerase alpha catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 74.476 74.563 2 8.5996E-58 86056 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 151.54 140.33 74603000 0 0 0 5443400 0 7323200 4364200 0 0 10742000 8714100 9665800 8084200 6783500 13483000 6893 895 6298 57945;57946;57947;57948;57949;57950;57951;57952;57953;57954;57955 45912;45913;45914;45915;45916;45917;45918;45919;45920;45921;45922 45920 11 DEENHEESESLQEDMLGNR Oxidation (M) 2275.9135 0.91351236 3255 Q8IX12 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes yes 0 1 0 By MS/MS 10 0 1 1 37.519 38.255 3 0.00039336 41377 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.204 44.606 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6894 3255 6299 57956 45923 45923 4864 1 DEENNPLETEYGLSVYK Unmodified 1998.9058 0.90583143 1183 P25205 MCM3 DNA replication licensing factor MCM3 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 80.673 79.841 2 4.7604E-35 98483 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 150.69 142.18 177280000 40656000 0 0 0 8512800 19044000 8723800 0 12483000 18388000 21528000 27119000 0 20829000 0 6895 1183 6300 57957;57958;57959;57960;57961;57962;57963;57964;57965 45924;45925;45926;45927;45928 45927 3 DEEPGDLGR Unmodified 986.4305 0.43050325 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 0 0 By MS/MS 10 0 1 1 22.827 22.987 2 0.031109 24093 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 69.198 45.674 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6896 4139 6301 57966 45929 45929 1 DEERAEEIVAAQEK Unmodified 1615.7689 0.76894402 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 42.202 42.478 3 0.015879 47373 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 34.302 17.875 17350000 0 0 0 0 0 5019900 0 3725400 3811000 0 0 4793300 0 0 0 6897 5189 6302 57967;57968;57969;57970 45930;45931 45931 2 DEERHVGDLGNVTADK Unmodified 1753.8231 0.82310485 725 P00441 SOD1 Superoxide dismutase [Cu-Zn] yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.2 3.93 1 12 4 18 10 4 3 2 1 2 2 1 1 2 2 2 1 2 38.338 36.671 2;3;4 2.8509E-171 47080 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 259 259 5772900000 2097600000 1211300000 676990000 28568000 2864500 0 14100000 13316000 2414300 6731000 427480000 320820000 24925000 31970000 913880000 6898 725 6303 57971;57972;57973;57974;57975;57976;57977;57978;57979;57980;57981;57982;57983;57984;57985;57986;57987;57988;57989;57990;57991;57992;57993;57994;57995;57996;57997;57998;57999;58000;58001;58002;58003;58004;58005 45932;45933;45934;45935;45936;45937;45938;45939;45940;45941;45942;45943;45944;45945;45946;45947;45948;45949;45950;45951;45952;45953;45954;45955;45956;45957;45958;45959;45960;45961;45962;45963;45964;45965;45966 45953 27 DEESGGGSNPFQHLEK Unmodified 1729.7544 0.75435658 5267 Q9Y678 COPG1 Coatomer subunit gamma-1 yes yes 0 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 1 3 57.507 51.323 2;3 3.8945E-62 66423 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 186.16 172.35 123360000 14213000 109140000 0 0 0 0 0 0 0 0 0 0 0 0 0 6899 5267 6304 58006;58007;58008;58009 45967;45968 45967 2 DEESGSGSNPFQHLEK Unmodified 1759.7649 0.76492127 4839 Q9UBF2 COPG2 Coatomer subunit gamma-2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 56.591 51.247 3 0.0074333 63422 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 50.305 44.59 13620000 0 13620000 0 0 0 0 0 0 0 0 0 0 0 0 0 6900 4839 6305 58010;58011 45969 45969 0 DEETGLCLLPLK Unmodified 1386.7065 0.7064671 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 87.002 86.018 2 2.2859E-05 100196 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 102.61 91.119 73798000 0 52569000 0 11214000 0 2631400 1540100 0 1863000 0 0 0 2264600 1715100 0 6901 1029 6306 58012;58013;58014;58015;58016;58017;58018;58019;58020 45970;45971;45972;45973;45974;45975;45976;45977 45976 8 DEEVLKK Unmodified 859.4651 0.46509784 2347;118 O00148;Q13838 DDX39A;DDX39B ATP-dependent RNA helicase DDX39A;Spliceosome RNA helicase DDX39B no no 0 0 1 By MS/MS 3 0 1 1 12.708 9.2866 2 0.038417 11861 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 124.89 21.601 147230000 0 147230000 0 0 0 0 0 0 0 0 0 0 0 0 0 6902 118;2347 6307 58021 45978 45978 0 DEFEERAK Unmodified 1022.4669 0.46688876 437 O60841 EIF5B Eukaryotic translation initiation factor 5B yes yes 0 0 1 By MS/MS 3 0 1 1 15.169 11.644 2 0.032339 14765 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 143.89 23.398 36184000 0 36184000 0 0 0 0 0 0 0 0 0 0 0 0 0 6903 437 6308 58022 45979 45979 1 DEFEGLFK Unmodified 983.46001 0.46001246 1137 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 77.127 77.193 2 0.010456 89053 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 79.597 69.183 53075000 0 0 0 1864000 1905900 0 2807400 2795400 1379300 4496300 6815300 5130600 4148400 4665000 17067000 6904 1137 6309 58023;58024;58025;58026;58027;58028;58029;58030;58031;58032;58033 45980;45981;45982;45983;45984;45985;45986;45987;45988 45987 9 DEFGELEGTRPNKK Unmodified 1618.7951 0.79509919 4997 Q9ULJ3 ZBTB21 Zinc finger and BTB domain-containing protein 21 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 39.464 39.663 3 0.016946 42971 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.576 37.785 52639000 0 0 0 4257000 3127200 0 4912100 0 5965800 0 5356300 6685500 9130900 5860600 7344100 6905 4997 6310 58034;58035;58036;58037;58038;58039;58040;58041;58042 45989 45989 1 DEFPEVYVPTVFENYVADIEVDGK Unmodified 2773.3011 0.30105879 1907 P62745 RHOB Rho-related GTP-binding protein RhoB yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 101.53 95.107 2 6.5581E-08 120067 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 102.08 91.45 29618000 17182000 12436000 0 0 0 0 0 0 0 0 0 0 0 0 0 6906 1907 6311 58043;58044 45990;45991 45991 2 DEFQLLQAQYHSLK Unmodified 1718.8628 0.86278482 2148 Q08117 AES Amino-terminal enhancer of split yes yes 0 0 0 By MS/MS 2 0 1 1 84.504 79.761 3 0.00046237 99236 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.168 56.476 21590000 0 21590000 0 0 0 0 0 0 0 0 0 0 0 0 0 6907 2148 6312 58045 45992 45992 1 DEFTIIPVLVGALSESK Unmodified 1816.9822 0.98223126 5135 Q9Y316 MEMO1 Protein MEMO1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.29 0.452 5 2 1 5 1 102.47 97.929 2;3 1.7274E-07 121668 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.59 73.059 60778000 7622300 52435000 720930 0 0 0 0 0 0 0 0 0 0 0 0 6908 5135 6313 58046;58047;58048;58049;58050;58051;58052 45993;45994;45995;45996;45997;45998;45999;46000 45999 8 DEGASLAENK Unmodified 1032.4724 0.47236807 2953 Q6PID6 TTC33 Tetratricopeptide repeat protein 33 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 8 1 2 1 1 1 1 1 15.58 15.837 2 0.0026817 15734 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 81.163 54.561 55997000 0 0 0 0 0 0 4258700 1126900 0 5848000 6800600 0 11865000 10570000 15527000 6909 2953 6314 58053;58054;58055;58056;58057;58058;58059;58060 46001;46002;46003;46004;46005;46006 46001 6 DEGNDYFK Unmodified 986.39814 0.39814049 692 O95801 TTC4 Tetratricopeptide repeat protein 4 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 31.191 31.492 2 0.029645 34587 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 56.011 50.473 25782000 0 0 0 0 0 4107400 2665800 0 1340300 4526600 0 4313400 2589100 2273600 3965500 6910 692 6315 58061;58062;58063;58064;58065;58066;58067;58068 46007 46007 1 DEGPVAEQVK Unmodified 1070.5244 0.52440364 3576 Q8WWM7 ATXN2L Ataxin-2-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 25.307 25.522 2 0.0071865 25827 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.076 32.821 95419000 0 0 0 0 4409700 11468000 7157800 7528600 8725900 10557000 0 10123000 7997000 9107100 18346000 6911 3576 6316 58069;58070;58071;58072;58073;58074;58075;58076;58077;58078 46008;46009;46010;46011;46012;46013;46014;46015;46016;46017 46012 10 DEHLQQYQEVCAQR Unmodified 1802.8006 0.80059527 2768 Q5T1M5 FKBP15 FK506-binding protein 15 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 40.045 39.975 3 0.0014296 44431 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 37.657 33.933 20764000 0 0 0 5291400 0 6840000 3689500 0 4943000 0 0 0 0 0 0 6912 2768 6317 58079;58080;58081;58082 46018;46019;46020 46020 3 DEHNEERDVMLAK Unmodified 1584.7202 0.72021968 1333 P33992 MCM5 DNA replication licensing factor MCM5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching 8.23 3.24 2 1 10 1 1 1 1 1 1 1 1 1 1 1 1 1 30.89 29.99 3 0.0066906 42103 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.03 32.084 221950000 59055000 5093300 14111000 0 2727000 10146000 0 5359200 4449400 10339000 14185000 22446000 17937000 17900000 38201000 6913 1333 6318 58083;58084;58085;58086;58087;58088;58089;58090;58091;58092;58093;58094;58095 46021;46022;46023;46024;46025;46026 46024 6 DEHNEERDVMLAK Oxidation (M) 1600.7151 0.71513431 1333 P33992 MCM5 DNA replication licensing factor MCM5 yes yes 0 1 1 By MS/MS By matching By matching 2 0 3 1 1 1 26.239 22.036 3 0.03971 30907 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.704 43.447 72067000 48948000 13079000 10040000 0 0 0 0 0 0 0 0 0 0 0 0 6914 1333 6318 58096;58097;58098 46027 46027 0 DEIAEVANEIENLGSTEERK Unmodified 2245.071 0.070999276 2538 Q15438 CYTH1 Cytohesin-1 yes yes 0 0 1 By MS/MS 2 0 1 1 94.9 86.77 3 1.0883E-06 112329 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.883 43.261 6662900 6662900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6915 2538 6319 58099 46028 46028 1 DEIALVLFGTDGTDNPLSGGDQYQNITVHR Unmodified 3244.5636 0.56364927 974 P13010 XRCC5 X-ray repair cross-complementing protein 5 yes yes 0 0 0 By MS/MS 2 0 1 1 97.73 89.6 3 1.5975E-60 115673 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 91.1 85.67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6916 974 6320 58100 46029 46029 1 DEIDSAVK Unmodified 875.42363 0.42362696 1155 P23381 WARS Tryptophan--tRNA ligase, cytoplasmic;T1-TrpRS;T2-TrpRS yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 22.588 22.776 2 0.045385 23616 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 48.561 7.0591 62577000 0 0 0 0 2095400 10954000 3410200 0 3792700 0 14354000 0 5971700 0 21998000 6917 1155 6321 58101;58102;58103;58104;58105;58106;58107 46030 46030 1 DEILPTTPISEQK Unmodified 1469.7613 0.76133944 1156 P23396 RPS3 40S ribosomal protein S3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.81 3.8 3 1 12 3 1 1 1 1 1 1 1 1 1 1 1 1 1 75.353 75.617 2 2.1911E-08 77172 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 108.43 92.207 1637500000 55279000 46712000 0 89907000 71924000 128940000 56386000 60786000 76663000 125920000 162650000 214130000 188610000 153930000 205620000 6918 1156 6322 58108;58109;58110;58111;58112;58113;58114;58115;58116;58117;58118;58119;58120;58121;58122;58123 46031;46032;46033;46034;46035;46036;46037;46038;46039;46040;46041;46042;46043;46044;46045;46046;46047;46048;46049;46050 46035 20 DEIRHWILPQDYDHAQAEAR Unmodified 2462.1727 0.17271943 2515 Q15293 RCN1 Reticulocalbin-1 yes yes 0 0 1 By MS/MS 2 0 1 1 77.817 69.686 4 0.0086864 91669 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 34.72 27.444 27183000 27183000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6919 2515 6323 58124 46051 46051 1 DEIRHWILPQDYDHAQAEARHLVYESDK Unmodified 3433.644 0.64396528 2515 Q15293 RCN1 Reticulocalbin-1 yes yes 0 0 2 By MS/MS 2 0 1 1 85.51 77.379 5 0.025095 100907 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 15.519 10.033 7427100 7427100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6920 2515 6324 58125 46052 46052 1 DEISVDSLDFNKK Unmodified 1508.7359 0.73585297 1941;2847 P63151;Q66LE6 PPP2R2A;PPP2R2D Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform no no 0 0 1 By MS/MS By MS/MS 2.67 0.471 1 2 1 2 71.349 66.757 2;3 0.00095098 81545 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 61.212 48.232 15198000 0 15198000 0 0 0 0 0 0 0 0 0 0 0 0 0 6921 1941;2847 6325 58126;58127;58128 46053;46054;46055 46053 2 DEITSVLQDHLIK Unmodified 1509.8039 0.80387296 589 O94822 LTN1 E3 ubiquitin-protein ligase listerin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 5.2 3.92 3 2 2 1 1 1 85.775 83.395 2;3 1.2381E-13 103938 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.39 86.958 167940000 0 154420000 1914100 0 0 2534400 0 0 0 0 0 0 0 0 9076900 6922 589 6326 58129;58130;58131;58132;58133 46056;46057;46058 46056 3 DELASLK Unmodified 774.41233 0.41233399 3180 Q86W92 PPFIBP1 Liprin-beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 34.893 35.125 2 0.023384 39138 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 88.029 36.456 521340000 0 0 0 40397000 0 41740000 42126000 35753000 38028000 64696000 70153000 56893000 58224000 0 73330000 6923 3180 6327 58134;58135;58136;58137;58138;58139;58140;58141;58142;58143 46059;46060;46061 46061 3 DELDELK Unmodified 860.41273 0.41272792 986 P13797 PLS3 Plastin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.988 40.167 2 0.02336 43543 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.369 42.706 207670000 0 0 0 10203000 5777300 33457000 10927000 7046000 13550000 21835000 22359000 18695000 9971900 20102000 33748000 6924 986 6328 58144;58145;58146;58147;58148;58149;58150;58151;58152;58153;58154;58155 46062;46063 46062 2 DELDSLITAITTNGAHPSK Unmodified 1981.9956 0.99564949 2298 Q13485 SMAD4 Mothers against decapentaplegic homolog 4 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 96.943 92.918 3 7.0213E-14 114996 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.88 84.493 23497000 0 23497000 0 0 0 0 0 0 0 0 0 0 0 0 0 6925 2298 6329 58156;58157 46064 46064 1 DELDVRITALK Unmodified 1271.7085 0.70851601 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 1 By MS/MS By MS/MS 2.67 0.471 1 2 2 1 75.319 70.024 3 0.0020715 90543 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.763 40.846 42182000 34463000 7718700 0 0 0 0 0 0 0 0 0 0 0 0 0 6926 965 6330 58158;58159;58160 46065;46066 46066 2 DELERVAK Unmodified 958.50836 0.50835964 1512 P46782 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 22.786 18.851 2 0.011961 25218 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 153.04 48.588 285290000 53327000 208540000 23414000 0 0 0 0 0 0 0 0 0 0 0 0 6927 1512 6331 58161;58162;58163 46067;46068 46067 1 DELFALEQSCAQVVLQAANER Unmodified 2390.1536 0.15362347 2626 Q16658 FSCN1 Fascin yes yes 0 0 0 By MS/MS 3 0 1 1 95.953 92.449 3 0.0029007 95508 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 36.246 32.858 2150500 2150500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6928 2626 6332 58164 46069 46069 1 DELGEQVLGLK Unmodified 1199.6398 0.63976774 463 O75150 RNF40 E3 ubiquitin-protein ligase BRE1B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 76.212 75.07 2 2.6897E-05 86708 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 120.12 75.366 718480000 18293000 408480000 3769600 14541000 17222000 20270000 17956000 25332000 17942000 24970000 30347000 33277000 19982000 22766000 43328000 6929 463 6333 58165;58166;58167;58168;58169;58170;58171;58172;58173;58174;58175;58176;58177;58178;58179;58180 46070;46071;46072;46073;46074;46075;46076;46077;46078;46079;46080;46081;46082;46083;46084;46085;46086;46087;46088 46076 19 DELGIPLK Unmodified 883.50148 0.50148335 2235 Q13112 CHAF1B Chromatin assembly factor 1 subunit B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 68.236 67.193 2 0.017995 77177 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 64.803 42.181 351100000 8937700 255660000 0 0 6062000 7496200 5997400 5189200 5118500 11155000 0 9715000 6804600 10235000 18728000 6930 2235 6334 58181;58182;58183;58184;58185;58186;58187;58188;58189;58190;58191;58192 46089;46090;46091;46092;46093;46094;46095;46096;46097;46098 46090 10 DELHHSGWNTCSSCFGDSTK Unmodified 2323.9222 0.92224332 2256 Q13228 SELENBP1 Selenium-binding protein 1 yes yes 0 0 0 By MS/MS 2 0 2 2 49.82 45.904 3;4 3.7594E-05 57863 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 53.188 52.006 23164000 0 0 23164000 0 0 0 0 0 0 0 0 0 0 0 0 6931 2256 6335 58193;58194 46099;46100 46100 1 DELHIVEAEAMNYEGSPIK Oxidation (M) 2160.0045 0.0044996155 830 P06748 NPM1 Nucleophosmin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.02 3.35 8 5 37 4 6 3 2 3 3 2 3 3 4 4 4 2 4 3 81.867 80.68 2;3 1.4484E-77 93434 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 157.38 144.18 3320700000 641430000 1106800000 102040000 16949000 28813000 75271000 23774000 42422000 60853000 214160000 219090000 222620000 4127800 126650000 435670000 6932 830 6336 58195;58196;58197;58198;58199;58200;58201;58202;58203;58204;58205;58206;58207;58208;58209;58210;58211;58212;58213;58214;58215;58216;58217;58218;58219;58220;58221;58222;58223;58224;58225;58226;58227;58228;58229;58230;58231;58232;58233;58234;58235;58236;58237;58238;58239;58240;58241;58242;58243;58244 46101;46102;46103;46104;46105;46106;46107;46108;46109;46110;46111;46112;46113;46114;46115;46116;46117;46118;46119;46120;46121;46122;46123;46124;46125;46126;46127;46128;46129;46130;46131;46132;46133;46134;46135;46136;46137;46138;46139;46140;46141 46113 1007 30 DELHIVEAEAMNYEGSPIK Unmodified 2144.0096 0.0095849934 830 P06748 NPM1 Nucleophosmin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3.13 2.73 1 10 2 2 7 4 2 1 1 88.477 85.255 2;3;4 3.8921E-31 101909 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 120.39 113.5 1988300000 811790000 1096600000 48265000 0 0 0 0 0 0 6112800 0 0 0 0 25565000 6933 830 6336 58245;58246;58247;58248;58249;58250;58251;58252;58253;58254;58255;58256;58257;58258;58259 46142;46143;46144;46145;46146;46147;46148;46149;46150;46151;46152;46153;46154;46155;46156;46157;46158 46157 17 DELIHELK Unmodified 995.52876 0.52876073 437 O60841 EIF5B Eukaryotic translation initiation factor 5B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.24 2 1 10 1 2 1 1 1 1 1 1 1 1 1 1 45.594 44.351 2 0.0025649 57904 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.46 37.08 470740000 47354000 91661000 0 0 12078000 59412000 20230000 27308000 32456000 0 28074000 44671000 28946000 23576000 54976000 6934 437 6337 58260;58261;58262;58263;58264;58265;58266;58267;58268;58269;58270;58271;58272 46159;46160;46161;46162;46163;46164;46165;46166 46160 7 DELIKDDAEIHVPEEQAAR Unmodified 2177.06 0.06004066 2830 Q5VZ89 DENND4C DENN domain-containing protein 4C yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 63.565 63.731 3 0.0097304 72200 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 30.042 20.512 4499000 0 0 0 0 0 0 1560600 0 0 0 0 0 0 2938400 0 6935 2830 6338 58273;58274 46167 46167 1 DELIKDDAEIHVPEEQAARELITK Unmodified 2761.4134 0.41340321 2830 Q5VZ89 DENND4C DENN domain-containing protein 4C yes yes 0 0 2 By MS/MS 2 0 1 1 83.469 75.338 4 0.0002076 98536 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.426 43.314 10572000 10572000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6936 2830 6339 58275 46168 46168 1 DELILEGNDIELVSNSAALIQQATTVK Unmodified 2883.5077 0.50769752 1326 P32969 RPL9 60S ribosomal protein L9 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 100.01 93.585 3 1.0182E-23 118259 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.248 52.571 43246000 14784000 28462000 0 0 0 0 0 0 0 0 0 0 0 0 0 6937 1326 6340 58276;58277 46169;46170 46170 2 DELLGEKPEVK Unmodified 1255.666 0.66598249 869 P08651 NFIC Nuclear factor 1 C-type yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.46 1.87 2 24 2 2 2 2 2 2 2 2 2 2 2 2 2 42.386 42.175 2;3 0.00034635 47107 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 70.488 53.857 994210000 0 29693000 0 42365000 34735000 108790000 53410000 45050000 102500000 106360000 103780000 32764000 92177000 85872000 156710000 6938 869 6341 58278;58279;58280;58281;58282;58283;58284;58285;58286;58287;58288;58289;58290;58291;58292;58293;58294;58295;58296;58297;58298;58299;58300;58301;58302;58303 46171;46172;46173;46174;46175;46176;46177;46178;46179;46180;46181;46182;46183;46184;46185 46182 9 DELLSEKPEIK Unmodified 1299.6922 0.69219725 174 O00712 NFIB Nuclear factor 1 B-type yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.86 3.4 1 1 5 2 1 1 1 1 1 51.986 50.254 3 0.0024854 56999 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 54.7 31.782 92783000 0 25023000 0 6478200 0 0 15822000 13473000 0 0 0 0 0 0 31987000 6939 174 6342 58304;58305;58306;58307;58308;58309;58310 46186;46187;46188;46189;46190;46191 46189 5 DELLSEKPEVK Unmodified 1285.6765 0.67654718 2199 Q12857 NFIA Nuclear factor 1 A-type yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.7 1.43 1 22 1 2 1 1 2 2 2 2 2 2 2 2 2 42.756 42.749 2;3 0.00071079 48485 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 63.408 46.041 551100000 0 6975300 0 23575000 16484000 20072000 32988000 22896000 62219000 56577000 61710000 43944000 45105000 57828000 100730000 6940 2199 6343 58311;58312;58313;58314;58315;58316;58317;58318;58319;58320;58321;58322;58323;58324;58325;58326;58327;58328;58329;58330;58331;58332;58333 46192;46193;46194;46195;46196;46197;46198;46199;46200;46201;46202;46203;46204;46205 46205 12 DELLSYIK Unmodified 979.52261 0.52261272 3952 Q96Q11 TRNT1 CCA tRNA nucleotidyltransferase 1, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 75.999 75.206 2 0.016257 93106 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.47 43.967 161800000 0 140490000 2420000 0 0 0 0 0 0 1578000 2356400 3973200 1799000 2526100 6661000 6941 3952 6344 58334;58335;58336;58337;58338;58339;58340;58341 46206;46207;46208;46209 46206 4 DELMQHMDEVNDELIRK Unmodified 2113.9772 0.97723901 4423 Q9H6S3 EPS8L2 Epidermal growth factor receptor kinase substrate 8-like protein 2 yes yes 0 0 1 By MS/MS 2 0 1 1 80.62 72.49 4 0.038473 95089 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 22.196 18.703 13847000 13847000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6942 4423 6345 58342 46210 46210 0 DELNADHPFIYIIR Unmodified 1714.8679 0.8678702 1383 P36952 SERPINB5 Serpin B5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 84.815 84.954 3 8.6239E-09 98065 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.486 72.049 77068000 0 0 0 0 0 12920000 1976100 5707800 5907200 6751600 5975100 4635700 3540700 3560400 26093000 6943 1383 6346 58343;58344;58345;58346;58347;58348;58349;58350;58351;58352 46211;46212;46213;46214;46215;46216 46214 6 DELPIEVDLGK Unmodified 1226.6394 0.63943339 4446 Q9H871 RMND5A Protein RMD5 homolog A yes yes 0 0 0 By MS/MS By MS/MS 2.67 0.471 1 2 1 2 83.917 80.031 2 0.015276 99326 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.098 52.159 171770000 604590 171170000 0 0 0 0 0 0 0 0 0 0 0 0 0 6944 4446 6347 58353;58354;58355 46217;46218 46217 2 DELQALLAATSTAGSQDIK Unmodified 1930.9848 0.98475045 2286 Q13424 SNTA1 Alpha-1-syntrophin yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 94.188 90.142 2;3 2.9111E-05 111787 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.763 54.371 54699000 0 54699000 0 0 0 0 0 0 0 0 0 0 0 0 0 6945 2286 6348 58356;58357;58358 46219;46220 46219 2 DELRETLK Unmodified 1002.5346 0.53457439 1578 P49588 AARS Alanine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 29.871 26.098 2 0.030994 33269 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 109.11 31.187 695980000 0 636220000 59757000 0 0 0 0 0 0 0 0 0 0 0 0 6946 1578 6349 58359;58360 46221 46221 0 DELRTCTADSK Unmodified 1294.5823 0.58232922 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 13.62 10.23 2 0.0052979 13945 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 111.27 67.458 22243000 0 22243000 0 0 0 0 0 0 0 0 0 0 0 0 0 6947 3443 6350 58361;58362 46222 46222 1 DELTESPK Unmodified 917.43419 0.43419164 3405 Q8NC51 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.33 3.34 1 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 23.033 22.993 2 0.0067687 17497 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 97.798 59.647 413100000 75014000 26205000 0 12759000 15522000 21145000 23996000 15352000 16801000 19753000 28782000 49477000 32480000 34886000 40926000 6948 3405 6351 58363;58364;58365;58366;58367;58368;58369;58370;58371;58372;58373;58374;58375;58376;58377 46223;46224;46225;46226;46227;46228;46229;46230;46231;46232;46233;46234;46235;46236;46237 46223 15 DELWLVMK Oxidation (M) 1048.5263 0.52631789 684 O95747;Q9UEW8 OXSR1;STK39 Serine/threonine-protein kinase OSR1;STE20/SPS1-related proline-alanine-rich protein kinase yes no 0 1 0 By MS/MS 10 0 1 1 74.938 74.93 2 0.010048 86506 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 69.176 26.261 3565800 0 0 0 0 0 3565800 0 0 0 0 0 0 0 0 0 6949 684 6352 58378 46238 46238 825 1 DEMVPRLVK Oxidation (M) 1101.5852 0.58522975 4806 Q9P258 RCC2 Protein RCC2 yes yes 0 1 1 By matching By MS/MS 2 0 2 1 1 45.615 39.991 2 0.041549 50889 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 103.83 77.449 17692000 6438800 0 11253000 0 0 0 0 0 0 0 0 0 0 0 0 6950 4806 6353 58379;58380 46239 46239 0 DENAIYFLGNSLGLQPK Unmodified 1877.9523 0.95232811 2629 Q16719 KYNU Kynureninase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.25 3.34 2 1 1 2 1 1 95.795 93.195 3 4.9461E-19 114433 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.35 111.05 257960000 0 250320000 2826900 0 0 0 0 0 0 0 0 0 0 0 4812800 6951 2629 6354 58381;58382;58383;58384 46240;46241;46242;46243;46244 46241 5 DENATLDGGDVLFTGR Unmodified 1678.7798 0.77984305 579 O94760 DDAH1 N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 yes yes 0 0 0 By MS/MS 10 0 1 1 77.392 77.657 2 2.3241E-05 89257 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 97.86 86.129 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6952 579 6355 58385 46245 46245 1 DENFILK Unmodified 877.45453 0.45453316 1279 P30414 NKTR NK-tumor recognition protein;Putative peptidyl-prolyl cis-trans isomerase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.6 2.8 1 4 1 1 1 1 1 59.983 59.563 1;2 0.020071 87649 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 161.6 87.088 21854000 0 4589300 0 0 0 0 0 0 0 3914700 4444900 0 0 4286800 4618200 6953 1279 6356 58386;58387;58388;58389;58390 46246;46247 46246 2 DENLPPVICQDVENLQK Unmodified 2009.9728 0.97280556 4192 Q9BVL2 NUPL1 Nucleoporin p58/p45 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 84.295 84.449 2;3 0.0074274 98182 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 42.095 28.895 23193000 0 0 0 0 0 0 0 10601000 8024600 0 0 0 4567400 0 0 6954 4192 6357 58391;58392;58393;58394 46248;46249;46250;46251 46250 4 DENPFASLTATSQPIAAAAR Unmodified 2030.0069 0.006882877 623 O95155 UBE4B Ubiquitin conjugation factor E4 B yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 86.276 86.413 2 0.0033918 99900 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.265 40.4 4999800 0 0 0 0 0 0 0 0 0 0 0 0 0 1529800 3470000 6955 623 6358 58395;58396 46252 46252 1 DENQHSNASQSLCDIIR Unmodified 1985.8861 0.88611581 5051 Q9UPN7 PPP6R1 Serine/threonine-protein phosphatase 6 regulatory subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 62.111 62.365 3 8.6303E-05 71319 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 56.959 51.53 19075000 0 0 0 0 0 4605600 0 0 0 0 0 0 0 6813200 7656400 6956 5051 6359 58397;58398;58399 46253;46254;46255 46253 3 DEPAELKPDSEDLSSQSSASK Unmodified 2219.0077 0.0077303175 2816 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 0 0 1 By MS/MS 10 0 1 1 43.522 44.264 3 1.3886E-06 48590 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.779 44.199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6957 2816 6360 58400 46256 46256 1 DEPDTNLVALMK Oxidation (M) 1360.6544 0.65443153 661 O95433 AHSA1 Activator of 90 kDa heat shock protein ATPase homolog 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.33 2 2 11 2 2 1 1 1 1 1 1 1 1 1 1 1 62.766 61.084 2 9.1612E-06 70552 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 107.15 76.9 369750000 43863000 167720000 0 9251900 8020400 29472000 13801000 8453400 9383800 21990000 17616000 0 0 16029000 24147000 6958 661 6361 58401;58402;58403;58404;58405;58406;58407;58408;58409;58410;58411;58412;58413;58414;58415 46257;46258;46259;46260;46261;46262;46263;46264;46265;46266;46267;46268;46269;46270;46271;46272 46257 798 15 DEPDTNLVALMK Unmodified 1344.6595 0.65951691 661 O95433 AHSA1 Activator of 90 kDa heat shock protein ATPase homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 81.434 80.316 2 7.6557E-13 95427 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 129.1 115.75 1926300000 91791000 1464400000 2236800 14360000 14091000 46351000 21103000 21389000 12943000 40893000 40199000 28156000 18954000 31673000 77716000 6959 661 6361 58416;58417;58418;58419;58420;58421;58422;58423;58424;58425;58426;58427;58428;58429;58430;58431 46273;46274;46275;46276;46277;46278;46279;46280;46281;46282;46283;46284;46285;46286;46287;46288;46289;46290 46279 18 DEPEEELQK Unmodified 1115.4982 0.49824846 2289 Q13428 TCOF1 Treacle protein yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 25.213 25.415 2 0.020914 26638 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 52.716 34.807 89088000 0 0 0 6351900 5469500 8761400 4833900 5776300 9118700 7685600 6783800 7849400 6707900 6780800 12968000 6960 2289 6362 58432;58433;58434;58435;58436;58437;58438;58439;58440;58441;58442;58443 46291 46291 1 DEPEVEEEEEEEEEEEK Unmodified 2134.8074 0.80735875 4215 Q9BWU0 SLC4A1AP Kanadaptin yes yes 0 0 0 By MS/MS 1 0 1 1 106.32 107.22 2 4.024E-82 99210 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 244.72 239.23 12106000 0 12106000 0 0 0 0 0 0 0 0 0 0 0 0 0 6961 4215 6363 58444 46292 46292 1 DEPGAWEETFK Unmodified 1307.567 0.56699673 2441 Q14697 GANAB Neutral alpha-glucosidase AB yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 67.493 66.076 2 3.1966E-05 82345 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.3 77.156 1027000000 341830 789940000 3965200 7310600 6975200 11311000 12312000 9408200 7653700 12210000 30969000 25915000 13436000 19825000 75436000 6962 2441 6364 58445;58446;58447;58448;58449;58450;58451;58452;58453;58454;58455;58456;58457;58458;58459;58460;58461 46293;46294;46295;46296;46297;46298;46299;46300;46301;46302;46303;46304;46305;46306;46307;46308;46309;46310;46311 46298 16 DEPGEGSGVAR Unmodified 1072.4785 0.47851608 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 13.251 13.434 2 0.0012585 11792 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 73.985 58.725 85435000 0 0 0 0 5339200 9040700 5600600 0 4460300 8483600 8640500 8834200 11583000 9886600 13566000 6963 619 6365 58462;58463;58464;58465;58466;58467;58468;58469;58470;58471;58472 46312;46313;46314;46315;46316;46317;46318;46319 46316 6 DEPGEQVELKEEAEAPVEDGSQPPPPEPK Unmodified 3126.4517 0.45169879 5206 Q9Y4L1 HYOU1 Hypoxia up-regulated protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 68.303 62.011 3 6.2482E-30 79867 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.684 84.309 74993000 15691000 59302000 0 0 0 0 0 0 0 0 0 0 0 0 0 6964 5206 6366 58473;58474;58475 46320;46321;46322;46323;46324 46321 5 DEPSVAAMVYPFTGDHK Unmodified 1862.8509 0.85089951 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 2 1 1 1 1 83.35 83.37 2;3 4.3052E-05 96549 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 76.326 67.596 256450000 0 0 0 2763200 9233900 27098000 26625000 89314000 90525000 0 0 0 0 0 10892000 6965 1714 6367 58476;58477;58478;58479;58480;58481;58482;58483 46325;46326;46327;46328;46329;46330;46331 46326 6 DEPSVAAMVYPFTGDHK Oxidation (M) 1878.8458 0.84581413 1714 P53396 ACLY ATP-citrate synthase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 26 3 2 3 2 4 1 3 2 2 1 1 2 71.85 71.884 2;3 1.5605E-70 82718 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 168.76 157.85 850030000 0 0 0 42278000 49410000 57596000 163730000 287330000 19195000 42761000 50434000 118470000 2250700 2859000 13713000 6966 1714 6367 58484;58485;58486;58487;58488;58489;58490;58491;58492;58493;58494;58495;58496;58497;58498;58499;58500;58501;58502;58503;58504;58505;58506;58507;58508;58509 46332;46333;46334;46335;46336;46337;46338;46339;46340;46341;46342;46343;46344;46345;46346;46347;46348;46349;46350;46351;46352;46353;46354 46346 2773 10 DEPTGEVLSLVGK Unmodified 1342.698 0.6980109 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 80.648 80.696 2 0.0010046 93604 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 66.595 46.266 62107000 0 0 0 2782300 2911800 5866400 3873900 0 4105000 7831300 4966400 10192000 3745000 5880600 9952300 6967 528 6368 58510;58511;58512;58513;58514;58515;58516;58517;58518;58519;58520 46355;46356;46357;46358;46359;46360;46361;46362;46363 46359 9 DEQAVLCSK Unmodified 1048.4859 0.48590964 4183 Q9BVC3 DSCC1 Sister chromatid cohesion protein DCC1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 24.618 24.814 2 0.011172 26825 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 63.216 32.712 85948000 0 0 0 0 5765200 7679200 6251300 6722300 5781900 7340600 9726200 13673000 10558000 12451000 0 6968 4183 6369 58521;58522;58523;58524;58525;58526;58527;58528;58529;58530 46364;46365;46366;46367;46368 46364 4 DEQAVLCSKDK Unmodified 1291.6078 0.60781569 4183 Q9BVC3 DSCC1 Sister chromatid cohesion protein DCC1 yes yes 0 0 1 By MS/MS 2 0 1 1 37.722 31.224 3 0.014906 43608 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 41.399 22.727 31662000 31662000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6969 4183 6370 58531 46369 46369 1 DEQEHEFYK Unmodified 1223.5095 0.50948185 1482 P43686 PSMC4 26S protease regulatory subunit 6B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching 7 3.87 3 5 1 1 1 1 1 1 1 1 23.964 22.617 2 0.0011288 28874 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 152.97 135.73 208320000 11546000 68173000 1955900 0 0 11887000 0 0 0 26267000 28853000 47768000 0 0 11867000 6970 1482 6371 58532;58533;58534;58535;58536;58537;58538;58539 46370;46371;46372;46373;46374 46371 3 DEQERCITIK Unmodified 1290.6238 0.6238001 980 P13639 EEF2 Elongation factor 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 6 2 2 4 2 32.343 27.742 2;3 1.6291E-05 34447 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 161.67 78.463 1094600000 188580000 839020000 66957000 0 0 0 0 0 0 0 0 0 0 0 0 6971 980 6372 58540;58541;58542;58543;58544;58545;58546;58547 46375;46376;46377;46378;46379;46380;46381;46382;46383 46378 6 DEQFEQCVQNFNK Unmodified 1684.7151 0.71513431 162 O00499 BIN1 Myc box-dependent-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 61.871 61.408 2 1.2084E-54 75341 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 202.36 145.01 108450000 0 60148000 0 0 0 5041600 3366900 0 3586300 5962500 6851300 0 4489900 5703900 13303000 6972 162 6373 58548;58549;58550;58551;58552;58553;58554;58555;58556 46384;46385;46386;46387;46388;46389;46390;46391 46387 8 DEQIEHWK Unmodified 1083.4985 0.49852324 397 O60341 KDM1A Lysine-specific histone demethylase 1A yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31.665 30.782 2 0.0067028 32187 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.629 87.756 167770000 10183000 27908000 2592700 3988100 5822100 8983100 0 6783600 8005600 14097000 10758000 13475000 12568000 17684000 24917000 6973 397 6374 58557;58558;58559;58560;58561;58562;58563;58564;58565;58566;58567;58568;58569;58570 46392;46393;46394;46395;46396;46397;46398;46399;46400;46401;46402;46403 46395 11 DEQIEHWKK Unmodified 1211.5935 0.59348625 397 O60341 KDM1A Lysine-specific histone demethylase 1A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 21.602 21.988 3 0.038492 22937 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 31.379 18.802 33035000 0 0 0 0 0 0 0 8586100 0 0 0 10324000 14125000 0 0 6974 397 6375 58571;58572;58573 46404 46404 1 DEQINLLK Unmodified 971.52876 0.52876073 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 56.859 56.94 2 0.015549 65871 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 68.7 43.143 94644000 0 0 0 7059200 7396700 7521200 5737600 10322000 8870500 6557100 10539000 0 10044000 8848300 11748000 6975 2291 6376 58574;58575;58576;58577;58578;58579;58580;58581;58582;58583;58584 46405;46406;46407;46408;46409;46410;46411 46410 7 DEQLESLFQR Unmodified 1263.6095 0.60953025 804 P05198 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 78.234 77.106 2 2.5381E-42 89590 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 211.35 135.97 536320000 21674000 175070000 3582200 15127000 16789000 20404000 17487000 18961000 16355000 26550000 35781000 39752000 27700000 31000000 70093000 6976 804 6377 58585;58586;58587;58588;58589;58590;58591;58592;58593;58594;58595;58596;58597;58598;58599;58600 46412;46413;46414;46415;46416;46417;46418;46419;46420;46421;46422;46423;46424;46425;46426;46427;46428;46429;46430;46431;46432 46430 21 DEQLESLFQRTAWVFDDK Unmodified 2226.0593 0.059312378 804 P05198 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes yes 0 0 1 By MS/MS 2.33 0.471 2 1 3 98.458 91.867 2;3 3.5257E-81 116880 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 189.64 163.17 77132000 77132000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6977 804 6378 58601;58602;58603 46433;46434;46435 46434 3 DEQSAVSMLK Oxidation (M) 1122.5227 0.52268908 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 1 0 By MS/MS By matching 10 0 2 1 1 33.4 33.475 2 0.01436 36899 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 46.457 22.258 6628900 0 0 0 0 0 3215300 0 0 0 3413600 0 0 0 0 0 6978 2047 6379 58604;58605 46436 46436 3315 1 DEQSAVSMLK Unmodified 1106.5278 0.52777445 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.08 3.33 2 1 9 1 2 1 1 1 2 1 1 1 1 50.394 49.363 2 0.0019157 56204 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 99.802 34.764 214980000 0 153710000 0 0 0 0 0 4864200 4046300 0 9697500 12101000 0 12827000 17733000 6979 2047 6379 58606;58607;58608;58609;58610;58611;58612;58613;58614;58615;58616;58617 46437;46438;46439;46440;46441;46442;46443;46444;46445;46446;46447 46444 10 DERCQQLAAYGILEK Unmodified 1792.8778 0.87778296 4137 Q9BT78 COPS4 COP9 signalosome complex subunit 4 yes yes 0 0 1 By MS/MS By MS/MS 2.67 0.471 1 2 2 1 75.656 70.398 3 0.005459 90931 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.265 33.348 22521000 15250000 7271400 0 0 0 0 0 0 0 0 0 0 0 0 0 6980 4137 6380 58618;58619;58620 46448;46449;46450 46450 3 DEREEQLIK Unmodified 1158.5881 0.58806652 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 0 1 By MS/MS 3 0 1 1 32.094 27.653 3 0.02226 34548 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 78.556 65.6 29382000 0 29382000 0 0 0 0 0 0 0 0 0 0 0 0 0 6981 1286 6381 58621 46451 46451 0 DERVNLLSFTGSTQVGK Unmodified 1849.9534 0.95339074 1573 P49419 ALDH7A1 Alpha-aminoadipic semialdehyde dehydrogenase yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 83.065 77.755 3 0.01912 99689 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 33.353 15.436 14912000 11578000 0 3333800 0 0 0 0 0 0 0 0 0 0 0 0 6982 1573 6382 58622;58623 46452;46453 46452 2 DERYDHLDPTEMEK Unmodified 1776.7625 0.76247843 686 O95757 HSPA4L Heat shock 70 kDa protein 4L yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 6.56 3.86 3 1 5 1 2 1 1 1 1 1 1 49.874 47.522 3 0.00036669 52925 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.416 59.24 231860000 31621000 154910000 5186900 1830900 0 0 0 0 0 0 7612000 7346400 0 5956600 17394000 6983 686 6383 58624;58625;58626;58627;58628;58629;58630;58631;58632 46454;46455;46456;46457;46458;46459;46460;46461;46462 46455 8 DERYDHLDPTEMEK Oxidation (M) 1792.7574 0.75739305 686 O95757 HSPA4L Heat shock 70 kDa protein 4L yes yes 0 1 1 By MS/MS 3 0 2 2 37.399 32.799 3 0.0049746 40899 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 54.524 47.116 11256000 0 11256000 0 0 0 0 0 0 0 0 0 0 0 0 0 6984 686 6383 58633;58634 46463;46464;46465 46464 828 2 DESANQEEPEAR Unmodified 1373.5695 0.56951593 1629 P50552 VASP Vasodilator-stimulated phosphoprotein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 11.989 12.137 2 2.8806E-115 11466 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 213.31 172.28 228240000 0 0 0 13167000 13027000 21733000 21584000 10293000 12788000 21847000 12225000 23342000 17711000 18839000 41685000 6985 1629 6384 58635;58636;58637;58638;58639;58640;58641;58642;58643;58644;58645;58646 46466;46467;46468;46469;46470;46471;46472;46473;46474;46475;46476;46477;46478 46468 13 DESANQEEPEARVPAQSESVR Unmodified 2327.0626 0.062559855 1629 P50552 VASP Vasodilator-stimulated phosphoprotein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 39.164 39.447 3 2.3541E-67 43001 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 150.29 108.87 94844000 0 0 0 0 9635500 0 12020000 0 0 19045000 14225000 12994000 0 0 26924000 6986 1629 6385 58647;58648;58649;58650;58651;58652 46479;46480;46481;46482;46483;46484 46482 6 DESGFKDPSSDWEMSQSSIK Unmodified 2258.9638 0.96375701 2226 Q13042 CDC16 Cell division cycle protein 16 homolog yes yes 0 0 1 By MS/MS 3 0 1 1 72.279 67.753 3 0.018404 82704 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 28.813 25.804 2541700 0 2541700 0 0 0 0 0 0 0 0 0 0 0 0 0 6987 2226 6386 58653 46485 46485 1 DESGGGGGPTVPPHQEAASGELR Unmodified 2204.0094 0.0094020725 3047 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 41.327 41.648 3 0.0047699 46039 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 25.67 21.401 47682000 0 0 0 0 0 3656700 4011000 0 0 0 6381100 0 21984000 6047000 5602100 6988 3047 6387 58654;58655;58656;58657;58658;58659 46486;46487 46486 2 DESLALPAVNPLVTPQK Unmodified 1790.9778 0.97781458 4258 Q9BZ29 DOCK9 Dedicator of cytokinesis protein 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 86.889 87.039 2 0.00019131 101123 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 81.92 75.484 28598000 0 0 0 0 0 0 2310800 2829900 2776000 3409300 3057700 4116600 2591800 3079900 4425800 6989 4258 6388 58660;58661;58662;58663;58664;58665;58666;58667;58668 46488;46489;46490;46491;46492;46493;46494;46495;46496 46496 9 DESTDSGLSMSSYSVPR Unmodified 1816.7785 0.77852242 1516 P46937 YAP1 Transcriptional coactivator YAP1 yes yes 0 0 0 By MS/MS 10 0 1 1 65.724 66.261 2 4.4796E-14 75230 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 105 91.339 7566800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7566800 6990 1516 6389 58669 46497 46497 1 DETEFRNFIVWLEDQK Unmodified 2067.9902 0.99017018 5076 Q9Y224 C14orf166 UPF0568 protein C14orf166 yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 2 2 2 2 99.773 94.843 3 9.0946E-47 118593 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 159.83 150.78 108660000 91092000 17567000 0 0 0 0 0 0 0 0 0 0 0 0 0 6991 5076 6390 58670;58671;58672;58673 46498;46499;46500;46501;46502 46502 5 DETEFYLGK Unmodified 1100.5026 0.50260556 1070 P18077 RPL35A 60S ribosomal protein L35a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 58.465 58.515 2 0.020914 65648 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 52.716 42.024 34926000 0 0 0 2147200 1963100 0 2424500 0 0 4044100 6463200 6461200 5825500 5596700 0 6992 1070 6391 58674;58675;58676;58677;58678;58679;58680;58681;58682;58683 46503;46504;46505;46506;46507;46508;46509 46507 7 DETGELSSADEK Unmodified 1279.5416 0.54156984 3683 Q92900 UPF1 Regulator of nonsense transcripts 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.79 2.98 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 28.496 28.692 2 3.5972E-35 23234 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 177.78 159.96 280590000 50291000 0 0 11706000 10808000 12725000 12076000 9374700 10676000 18338000 29513000 32271000 26747000 25259000 30810000 6993 3683 6392 58684;58685;58686;58687;58688;58689;58690;58691;58692;58693;58694;58695;58696;58697 46510;46511;46512;46513;46514;46515;46516;46517;46518;46519;46520;46521;46522;46523 46521 14 DETLETEK Unmodified 963.43967 0.43967095 1837 P61163 ACTR1A Alpha-centractin yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.18 2.59 1 10 1 1 1 1 1 1 1 1 1 1 1 22.552 23.146 2 0.002758 92538 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 151.27 81.001 194680000 96997000 0 0 6298200 4050300 10831000 6261800 6243900 0 9255400 0 10054000 8740700 11363000 24590000 6994 1837 6393 58698;58699;58700;58701;58702;58703;58704;58705;58706;58707;58708 46524;46525;46526;46527;46528;46529;46530 46527 7 DETNARDTYVSSFPR Unmodified 1756.8016 0.80164113 1149 P23193 TCEA1 Transcription elongation factor A protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 51.667 51.823 3 6.3331E-10 57788 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 71.781 63.805 204010000 0 0 0 11713000 7145100 0 9505800 10930000 15060000 20200000 29324000 29246000 17357000 21982000 31544000 6995 1149 6394 58709;58710;58711;58712;58713;58714;58715;58716;58717;58718;58719 46531;46532;46533;46534;46535;46536;46537;46538;46539;46540;46541;46542;46543 46540 13 DETNYGIPQR Unmodified 1191.552 0.55201537 1950 P63244 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 0 0 0 By MS/MS 10 0 1 1 38.802 39.541 2 0.0027759 42877 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.219 64.337 10313000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10313000 6996 1950 6395 58720 46544 46544 1 DETTCISQDTRALSEK Unmodified 1852.8473 0.84727069 3281 Q8IYB7 DIS3L2 DIS3-like exonuclease 2 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 54.761 49.419 3 0.00016176 63703 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.898 61.424 74992000 0 74992000 0 0 0 0 0 0 0 0 0 0 0 0 0 6997 3281 6396 58721;58722 46545;46546 46545 2 DETVSDCSPHIANIGR Unmodified 1769.8003 0.80026092 1525 P47756 CAPZB F-actin-capping protein subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9 2.56 1 1 13 2 2 2 2 1 1 1 1 2 1 50.815 50.14 2;3 9.7031E-28 57308 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 128.28 110.01 485520000 0 26626000 0 57463000 44682000 0 40046000 43601000 0 0 49220000 58464000 27926000 69107000 68389000 6998 1525 6397 58723;58724;58725;58726;58727;58728;58729;58730;58731;58732;58733;58734;58735;58736;58737 46547;46548;46549;46550;46551;46552;46553;46554;46555;46556;46557;46558;46559;46560;46561 46561 15 DETVSDCSPHIANIGRLVEDMENK Unmodified 2728.2432 0.24324311 1525 P47756 CAPZB F-actin-capping protein subunit beta yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 90.55 83.497 3;4 1.2191E-69 106997 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 136.62 129.9 238320000 198940000 39378000 0 0 0 0 0 0 0 0 0 0 0 0 0 6999 1525 6398 58738;58739;58740 46562;46563;46564;46565 46565 3 DETVSDCSPHIANIGRLVEDMENK Oxidation (M) 2744.2382 0.23815773 1525 P47756 CAPZB F-actin-capping protein subunit beta yes yes 0 1 1 By MS/MS 2 0 1 1 79.977 71.846 4 0.00052349 94348 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.176 36.452 16131000 16131000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7000 1525 6398 58741 46566 46566 2423 1 DETYKPHLER Unmodified 1286.6255 0.62551466 3898 Q96JP5 ZFP91 E3 ubiquitin-protein ligase ZFP91 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 24.207 24.39 3 0.013323 26389 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 39.625 31.714 77049000 0 0 0 6702000 7653600 0 7940600 7364200 0 7272600 9751800 11369000 11240000 7755300 0 7001 3898 6399 58742;58743;58744;58745;58746;58747;58748;58749;58750 46567 46567 1 DEVAHTLTENR Unmodified 1283.6106 0.61059288 1304 P31749 AKT1 RAC-alpha serine/threonine-protein kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 26.027 26.291 3 0.027473 28338 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 36.32 32.676 14126000 0 0 0 0 0 3817900 2971800 0 0 0 0 5135600 2201100 0 0 7002 1304 6400 58751;58752;58753;58754 46568 46568 1 DEVAHTVTESR Unmodified 1242.584 0.58404378 1305 P31751 AKT2 RAC-beta serine/threonine-protein kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 16.342 16.624 2 0.012464 15909 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 64.297 52.071 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7003 1305 6401 58755;58756;58757;58758;58759;58760 46569;46570;46571;46572;46573;46574 46572 6 DEVAVCNLASLALNMYVTSEHTYDFK Unmodified 2989.3838 0.38375934 1171 P23921 RRM1 Ribonucleoside-diphosphate reductase large subunit yes yes 0 0 0 By MS/MS 2 0 1 1 101.81 93.681 3 3.6624E-05 120577 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.919 41.624 8486800 8486800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7004 1171 6402 58761 46575 46575 1 DEVCVNPYHYQR Unmodified 1578.6885 0.68852563 2579;2010 Q15796;P84022 SMAD2;SMAD3 Mothers against decapentaplegic homolog 2;Mothers against decapentaplegic homolog 3 no no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 45.769 45.887 3 0.013545 50437 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 31.04 25.863 62116000 0 0 0 3783000 4164900 0 5367400 0 5253800 7607600 9792800 0 7127600 8420100 10599000 7005 2579;2010 6403 58762;58763;58764;58765;58766;58767;58768;58769;58770 46576;46577;46578;46579 46577 4 DEVFEETEK Unmodified 1124.4873 0.48734943 2993 Q6XZF7 DNMBP Dynamin-binding protein yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 32.505 32.653 2 0.030157 35597 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 48.283 14.486 7453700 0 0 0 0 0 2355600 0 0 1595600 1690500 0 0 0 1811900 0 7006 2993 6404 58771;58772;58773;58774 46580;46581 46581 2 DEVLANR Unmodified 815.41373 0.41373097 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 16.587 16.745 2 0.043922 16729 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 67.035 34.918 45985000 0 0 0 11719000 0 0 14055000 0 0 0 16993000 0 0 3218100 0 7007 1986 6405 58775;58776;58777;58778 46582 46582 1 DEVLEVLEDGRQWWK Unmodified 1900.9319 0.93192702 4423 Q9H6S3 EPS8L2 Epidermal growth factor receptor kinase substrate 8-like protein 2 yes yes 0 0 1 By MS/MS 2 0 1 1 96.935 88.805 3 0.00057396 114719 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.788 51.52 18377000 18377000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7008 4423 6406 58779 46583 46583 1 DEVLYVFPSDFCR Unmodified 1645.7446 0.74464352 2366 Q14108 SCARB2 Lysosome membrane protein 2 yes yes 0 0 0 By MS/MS 10 0 1 1 88.665 88.808 2 0.0038082 102839 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.927 46.386 3470800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3470800 7009 2366 6407 58780 46584 46584 1 DEVVSPLPSALQGPSGSLSAPPAASVISAPPSSSSR Unmodified 3401.7314 0.73144288 3047 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 90.059 90.168 3 1.4455E-09 104501 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 31.757 29.828 29333000 0 0 0 0 2042600 1423600 1216400 2428000 1113000 3469800 4099000 4287900 0 2152400 7100100 7010 3047 6408 58781;58782;58783;58784;58785;58786;58787;58788;58789;58790 46585;46586;46587;46588;46589;46590;46591;46592;46593;46594 46587 10 DEVYHILK Unmodified 1015.5338 0.53384611 624 O95163 IKBKAP Elongator complex protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.91 3.42 2 1 8 2 1 1 1 1 1 1 1 2 49.198 47.673 2 0.011799 52885 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 113.89 74.226 95745000 0 41637000 17295000 0 0 0 0 0 2080400 0 14273000 12380000 3118100 0 4962500 7011 624 6409 58791;58792;58793;58794;58795;58796;58797;58798;58799;58800;58801 46595;46596;46597;46598;46599;46600;46601 46601 6 DEVYQILEK Unmodified 1135.5761 0.57610486 1695 P52732 KIF11 Kinesin-like protein KIF11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 69.111 68.458 2 0.0046691 85621 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.71 68.625 196720000 0 116370000 0 0 3436600 8392500 5203600 5003200 5910700 10167000 8367500 7579800 4738300 7753100 13795000 7012 1695 6410 58802;58803;58804;58805;58806;58807;58808;58809;58810;58811;58812;58813;58814 46602;46603;46604;46605;46606;46607;46608;46609;46610;46611;46612 46604 11 DEYACRVNHVTLSQPK Unmodified 1915.921 0.92104476 1858 P61769 B2M Beta-2-microglobulin;Beta-2-microglobulin form pI 5.3 yes yes 0 0 1 By MS/MS By MS/MS 2 0 4 2 2 48.341 42.465 3;4 2.6821E-23 58665 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 105.28 89.642 996560000 863770000 0 132790000 0 0 0 0 0 0 0 0 0 0 0 0 7013 1858 6411 58815;58816;58817;58818 46613;46614;46615;46616;46617 46615 3 DEYDDLAESEQFGVVMGTVPR Unmodified 2356.0529 0.052906371 417 O60610 DIAPH1 Protein diaphanous homolog 1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 44.612 45.062 5 0.022005 49363 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 17.824 1.5179 89311000 0 0 0 0 0 0 0 0 0 12447000 9805000 28213000 10344000 6923300 21578000 7014 417 6412 58819;58820;58821;58822;58823;58824 46618 46618 1 DEYFEEIMEEYEDIRQDHYESLK Unmodified 3009.2862 0.28621336 4049 Q99707 MTR Methionine synthase yes yes 0 0 1 By MS/MS 2 0 1 1 97.578 89.448 4 1.3043E-37 115473 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 115.66 109.43 32564000 32564000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7015 4049 6413 58825 46619 46619 1 DEYSSSETTGEKPEQNDDDTIK Unmodified 2487.0409 0.040880939 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 30.868 30.651 3 3.9677E-66 33314 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 118.16 115.66 130830000 0 9770400 0 10170000 8552300 9193400 9949500 7557700 9532400 12401000 11637000 16183000 0 10093000 15794000 7016 3443 6414 58826;58827;58828;58829;58830;58831;58832;58833;58834;58835;58836;58837 46620;46621;46622;46623;46624;46625;46626;46627;46628;46629;46630;46631;46632;46633 46630 14 DFAAEVVHPGDLK Unmodified 1396.6987 0.69867961 1740 P54577 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.89 3.76 7 4 16 5 4 2 1 1 1 1 2 1 2 1 1 1 2 2 69.426 67.916 2;3 1.6732E-15 77109 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 145.55 117.81 1947800000 295830000 1146300000 105300000 19019000 9666000 23190000 15336000 18330000 13515000 28242000 40698000 38093000 19428000 47511000 127370000 7017 1740 6415 58838;58839;58840;58841;58842;58843;58844;58845;58846;58847;58848;58849;58850;58851;58852;58853;58854;58855;58856;58857;58858;58859;58860;58861;58862;58863;58864 46634;46635;46636;46637;46638;46639;46640;46641;46642;46643;46644;46645;46646;46647;46648;46649;46650;46651;46652;46653;46654;46655;46656;46657 46643 19 DFAARSPSASITDEDSNV Unmodified 1880.8388 0.8388145 3180 Q86W92 PPFIBP1 Liprin-beta-1 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 63.637 57.317 2 1.9354E-47 73763 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 139.89 133.64 85690000 6556600 79134000 0 0 0 0 0 0 0 0 0 0 0 0 0 7018 3180 6416 58865;58866;58867 46658;46659 46658 2 DFAAVEEVAPAKPPR Unmodified 1595.8308 0.83075641 2734 Q5JSH3 WDR44 WD repeat-containing protein 44 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 2 1 1 1 63.87 64.182 2;3 3.5087E-06 73345 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 100.55 90.6 84431000 0 0 0 0 0 0 0 8899800 0 14487000 6515500 28462000 11994000 5837700 8234400 7019 2734 6417 58868;58869;58870;58871;58872;58873;58874;58875 46660;46661;46662;46663;46664;46665;46666;46667 46662 5 DFAAVEEVAPAKPPRHLTPEPDIVASTK Unmodified 2984.5607 0.56073615 2734 Q5JSH3 WDR44 WD repeat-containing protein 44 yes yes 0 0 2 By MS/MS 2 0 2 2 81.421 73.291 3;4 1.683E-08 95927 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.901 57.74 125400000 125400000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7020 2734 6418 58876;58877 46668;46669;46670 46669 3 DFADILVQPTLEENK Unmodified 1730.8727 0.87268081 4641 Q9NU22 MDN1 Midasin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 88.142 87.797 2 4.907E-28 102040 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 140.24 125.27 60525000 0 3935600 973620 1242100 3981100 4065200 2778200 4199600 3693000 6436400 5436800 6648300 4076100 5051700 8006800 7021 4641 6419 58878;58879;58880;58881;58882;58883;58884;58885;58886;58887;58888;58889;58890;58891 46671;46672;46673;46674;46675;46676;46677;46678;46679;46680;46681;46682;46683;46684;46685;46686;46687 46672 16 DFAIDIIK Unmodified 933.51713 0.51713341 2505 Q15181 PPA1 Inorganic pyrophosphatase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 4 10 2 1 1 1 1 1 1 1 1 1 1 1 1 83.225 82.206 2 0.013245 95464 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 72.789 35.695 1298600000 380530000 335510000 102350000 0 4926800 0 10198000 9441600 8552800 14580000 49820000 60076000 19515000 65388000 237740000 7022 2505 6420 58892;58893;58894;58895;58896;58897;58898;58899;58900;58901;58902;58903;58904;58905 46688;46689;46690;46691;46692;46693;46694;46695;46696;46697;46698;46699 46695 12 DFALDSEESR Unmodified 1167.5044 0.50439648 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 44.904 45.06 2 0.0045025 50960 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 72.607 57.347 133240000 0 0 0 13305000 13036000 17798000 9277800 14676000 9438700 9790500 11312000 10799000 0 11526000 12282000 7023 19 6421 58906;58907;58908;58909;58910;58911;58912;58913;58914;58915;58916 46700;46701;46702;46703;46704;46705;46706 46706 6 DFAPGSQLPILLYDSDAK Unmodified 1948.9782 0.97820851 698 O95833 CLIC3 Chloride intracellular channel protein 3 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 96.213 92.174 2 0.0094368 110597 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 41.052 32.748 46715000 0 46715000 0 0 0 0 0 0 0 0 0 0 0 0 0 7024 698 6422 58917;58918 46707 46707 1 DFAPLTPNIVR Unmodified 1241.6768 0.67682195 2167 Q08AM6 VAC14 Protein VAC14 homolog yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 79.882 79.97 2 0.011817 92766 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 65.305 52.317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7025 2167 6423 58919;58920 46708;46709 46709 2 DFAPPGQQK Unmodified 986.48214 0.48214489 4186 Q9BVC6 TMEM109 Transmembrane protein 109 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 28.033 28.123 2 0.040122 30292 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 62.659 31.429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7026 4186 6424 58921;58922 46710;46711 46711 2 DFAPVIVEAFK Unmodified 1234.6598 0.6597749 3942 Q96P16 RPRD1A Regulation of nuclear pre-mRNA domain-containing protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 91.642 90.526 2 0.0010106 105112 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 86.624 65.723 174190000 7737100 94652000 5842800 2308000 3351600 6350000 3301000 3822200 3950300 7281700 5362200 7847100 4566600 5953700 11865000 7027 3942 6425 58923;58924;58925;58926;58927;58928;58929;58930;58931;58932;58933;58934;58935;58936;58937;58938 46712;46713;46714;46715;46716;46717;46718;46719;46720;46721;46722;46723;46724;46725;46726 46714 15 DFASEVSNVLNK Unmodified 1321.6514 0.65139506 3659 Q92783 STAM Signal transducing adapter molecule 1 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 83.219 83.161 2 0.0056748 96298 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 91.584 73.272 13565000 0 0 0 1498800 0 2605600 0 0 0 0 0 0 0 0 9460500 7028 3659 6426 58939;58940;58941 46727;46728 46727 1 DFASIVLLDQR Unmodified 1275.6823 0.68230126 37 A8MPP1;Q92771 DDX11L8;DDX12P Putative ATP-dependent RNA helicase DDX11-like protein 8;Putative ATP-dependent RNA helicase DDX12 yes no 0 0 0 By MS/MS 10 0 1 1 87.872 88.022 2 0.04377 101837 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.076 40.944 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7029 37 6427 58942 46729 46729 1 DFAYGETDPLIR Unmodified 1395.667 0.66704513 2384 Q14166 TTLL12 Tubulin--tyrosine ligase-like protein 12 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 76.634 76.781 2 0.037256 88452 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 51.927 39.35 14162000 0 0 0 0 0 0 1652900 0 0 4354200 0 3887900 0 4267400 0 7030 2384 6428 58943;58944;58945;58946 46730;46731;46732 46731 2 DFAYGETDPLIRK Unmodified 1523.762 0.76200815 2384 Q14166 TTLL12 Tubulin--tyrosine ligase-like protein 12 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 66.332 66.444 3 0.0027336 75358 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.511 34.723 53287000 0 0 0 0 2228500 9938100 0 0 3210900 0 9996400 0 0 8460900 19452000 7031 2384 6429 58947;58948;58949;58950;58951;58952 46733;46734;46735;46736 46734 4 DFCIEASER Unmodified 1125.4761 0.47607323 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching 10 0 5 1 1 1 1 1 48.883 49.033 2 0.014773 55843 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 57.96 50.248 41554000 0 0 0 0 5109500 0 7367300 6169100 0 0 0 11656000 11252000 0 0 7032 4285 6430 58953;58954;58955;58956;58957 46737 46737 1 DFDALILDLERELSK Unmodified 1775.9305 0.93053004 3020 Q6ZW31 SYDE1 Rho GTPase-activating protein SYDE1 yes yes 0 0 1 By MS/MS 2 0 1 1 103.02 94.893 3 0.0011731 122039 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.66 49.253 4514600 4514600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7033 3020 6431 58958 46738 46738 1 DFDFESANAQFNK Unmodified 1531.6579 0.657937 3415 Q8ND56 LSM14A Protein LSM14 homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 72.964 72.74 2 1.051E-12 83472 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 167.12 146.38 491510000 0 8938000 0 30957000 38255000 36223000 32064000 36186000 34397000 45506000 46405000 68305000 36767000 29867000 47643000 7034 3415 6432 58959;58960;58961;58962;58963;58964;58965;58966;58967;58968;58969;58970;58971;58972 46739;46740;46741;46742;46743;46744;46745;46746;46747;46748;46749;46750;46751;46752;46753 46745 15 DFDFVPPVVR Unmodified 1189.6132 0.61315906 741 P01024 C3 Complement C3;Complement C3 beta chain;C3-beta-c;Complement C3 alpha chain;C3a anaphylatoxin;Acylation stimulating protein;Complement C3b alpha' chain;Complement C3c alpha' chain fragment 1;Complement C3dg fragment;Complement C3g fragment;Complement C3d fragment;Complement C3f fragment;Complement C3c alpha' chain fragment 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 87.061 87.212 2 0.014576 101164 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 50.607 41.744 4237200 0 0 0 0 0 0 0 2712800 0 1524300 0 0 0 0 0 7035 741 6433 58973;58974;58975 46754;46755;46756 46754 3 DFDFWLSEVEALLASEDYGK Unmodified 2333.074 0.073959389 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.44 0.497 5 4 4 4 1 105.24 100.49 2;3 5.7923E-107 124851 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 139.9 136.59 179930000 122480000 55979000 1477200 0 0 0 0 0 0 0 0 0 0 0 0 7036 2344 6434 58976;58977;58978;58979;58980;58981;58982;58983;58984 46757;46758;46759;46760;46761;46762;46763 46757 7 DFDTALK Unmodified 808.39668 0.39668393 1313 P31948 STIP1 Stress-induced-phosphoprotein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9 2.45 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41.58 41.006 2 0.030787 44640 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 74.415 43.747 620690000 6286000 110330000 0 18367000 13214000 13127000 19563000 17634000 10637000 20115000 67302000 61556000 17171000 70552000 174830000 7037 1313 6435 58985;58986;58987;58988;58989;58990;58991;58992;58993;58994;58995;58996;58997;58998 46764;46765;46766;46767;46768;46769 46768 6 DFDWNLK Unmodified 936.43413 0.43413207 3120;5227 Q7Z739;Q9Y5A9 YTHDF3;YTHDF2 YTH domain-containing family protein 3;YTH domain-containing family protein 2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74.183 73.187 2 0.018785 84435 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 111.28 97.503 689230000 11293000 117770000 3383400 18375000 16829000 36379000 33481000 33261000 42932000 58406000 62022000 43420000 39260000 57434000 114990000 7038 3120;5227 6436 58999;59000;59001;59002;59003;59004;59005;59006;59007;59008;59009;59010;59011;59012;59013 46770;46771;46772;46773;46774;46775;46776;46777;46778;46779 46776 10 DFEEYPEHR Unmodified 1220.5098 0.5098162 237 O14980 XPO1 Exportin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 31.485 31.671 2;3 0.0050726 34759 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 84.476 77.255 402220000 0 0 0 15380000 21377000 53893000 21361000 33398000 15674000 40127000 24715000 50831000 24150000 40172000 61143000 7039 237 6437 59014;59015;59016;59017;59018;59019;59020;59021;59022;59023;59024;59025;59026;59027;59028;59029;59030;59031;59032;59033;59034;59035;59036;59037 46780;46781;46782;46783;46784;46785;46786;46787;46788 46788 1 DFEGAVDLLDK Unmodified 1220.5925 0.5924832 3284 Q8IYI6 EXOC8 Exocyst complex component 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.439 81.5 2 0.0021805 94139 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 68.893 55.439 65956000 0 0 0 2397300 3614500 5903600 2882400 3515000 4412700 7591900 6956900 6822200 3775300 5739200 12345000 7040 3284 6438 59038;59039;59040;59041;59042;59043;59044;59045;59046;59047;59048;59049 46789;46790;46791;46792;46793;46794;46795;46796;46797;46798;46799 46791 11 DFENSMNQVK Unmodified 1210.5288 0.52883709 511 O75521 ECI2 Enoyl-CoA delta isomerase 2, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 41.567 41.74 2 0.0014986 46726 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 113.5 70.635 110720000 0 0 0 8763500 6587800 12819000 9247300 13316000 0 13800000 12186000 8416800 12411000 0 13170000 7041 511 6439 59050;59051;59052;59053;59054;59055;59056;59057;59058;59059 46800;46801;46802;46803;46804;46805;46806;46807;46808;46809;46810 46800 11 DFENSMNQVK Oxidation (M) 1226.5238 0.52375171 511 O75521 ECI2 Enoyl-CoA delta isomerase 2, mitochondrial yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 21.047 20.778 2 0.0057748 21629 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 59.245 50.382 22026000 0 6418500 0 0 0 0 0 0 3193600 0 2895600 4307100 0 1308700 3902200 7042 511 6439 59060;59061;59062;59063;59064;59065;59066 46811;46812;46813;46814;46815 46815 660 5 DFEPILEQQIHQDDFGESK Unmodified 2274.0441 0.044056244 624 O95163 IKBKAP Elongator complex protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS 6.9 3.81 3 1 6 1 2 1 1 1 1 1 1 1 82.59 80.815 3 4.7804E-18 96603 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 111.18 102.68 306060000 59671000 164230000 10322000 0 0 8332900 0 0 3601500 0 11610000 11767000 0 7525300 28998000 7043 624 6440 59067;59068;59069;59070;59071;59072;59073;59074;59075;59076 46816;46817;46818;46819;46820;46821;46822 46820 7 DFEPYDFTLDD Unmodified 1375.5456 0.54559259 2862 Q69YN2 CWF19L1 CWF19-like protein 1 yes yes 0 0 0 By MS/MS 1 0 1 1 104.81 110.07 2 0.0034462 90444 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 82.75 82.223 27140000 27140000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7044 2862 6441 59077 46823 46823 1 DFEQDILEDMYHAIK Unmodified 1865.8506 0.85056516 3615 Q92538 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 2 2 2 2 99.103 94.173 3 2.4347E-05 114198 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 81.311 77.113 139340000 116360000 22972000 0 0 0 0 0 0 0 0 0 0 0 0 0 7045 3615 6442 59078;59079;59080;59081 46824;46825;46826;46827 46826 4 DFEQPLAISR Unmodified 1174.5982 0.59823728 119 O00151 PDLIM1 PDZ and LIM domain protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.42 3.66 3 1 8 1 2 1 1 1 1 1 1 1 1 1 68.011 66.003 2 8.9536E-06 82051 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.75 106.59 453560000 18015000 267890000 7555700 14714000 0 14219000 0 13360000 8875300 22108000 0 70582000 16248000 0 0 7046 119 6443 59082;59083;59084;59085;59086;59087;59088;59089;59090;59091;59092;59093 46828;46829;46830;46831;46832;46833;46834;46835;46836;46837;46838 46830 7 DFEQPLAISRVTPGSK Unmodified 1743.9155 0.91554867 119 O00151 PDLIM1 PDZ and LIM domain protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.5 0.5 2 2 2 1 1 75.976 71.349 3 3.5376E-05 87613 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 98.694 88.355 152020000 77848000 10410000 63766000 0 0 0 0 0 0 0 0 0 0 0 0 7047 119 6444 59094;59095;59096;59097 46839;46840;46841;46842 46841 4 DFESSGLDR Unmodified 1024.4462 0.44615331 2583 Q15814 TBCC Tubulin-specific chaperone C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 35.017 35.435 2 0.0052744 39215 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 78.192 66.823 74727000 0 0 0 0 0 12589000 0 0 0 17185000 8705300 12285000 0 0 23962000 7048 2583 6445 59098;59099;59100;59101;59102;59103;59104 46843;46844;46845;46846;46847;46848 46843 6 DFESSGLDRSK Unmodified 1239.5731 0.57314474 2583 Q15814 TBCC Tubulin-specific chaperone C yes yes 0 0 1 By MS/MS 2.67 0.471 1 2 3 30.854 26.458 2;3 0.0078513 32925 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 90.15 76.571 21610000 0 21610000 0 0 0 0 0 0 0 0 0 0 0 0 0 7049 2583 6446 59105;59106;59107 46849;46850;46851 46850 2 DFETIGQNK Unmodified 1050.4982 0.49818889 4773 Q9NZM1 MYOF Myoferlin yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 35.823 35.811 2 0.033064 39401 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 47.082 25.782 24603000 0 0 0 2672900 2685300 4587700 3205700 4651400 3919100 0 2881300 0 0 0 0 7050 4773 6447 59108;59109;59110;59111;59112;59113;59114;59115 46852;46853;46854 46852 3 DFFAQQQHLTPDK Unmodified 1573.7525 0.75250609 4419 Q9H6Q4 NARFL Cytosolic Fe-S cluster assembly factor NARFL yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 3 1 63.287 57.555 2;3 6.0883E-21 74524 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.24 112.5 85321000 8179700 71840000 5301800 0 0 0 0 0 0 0 0 0 0 0 0 7051 4419 6448 59116;59117;59118;59119;59120 46855;46856;46857;46858 46855 3 DFFDAEIK Unmodified 983.46001 0.46001246 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.545 73.613 2 0.010849 84118 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.324 68.14 375730000 0 0 0 12183000 16994000 36379000 16398000 21587000 15717000 31180000 33193000 39396000 32456000 33872000 86371000 7052 848 6449 59121;59122;59123;59124;59125;59126;59127;59128;59129;59130;59131;59132 46859;46860;46861;46862 46861 4 DFFESNVLQLDPSLLTENGMK Unmodified 2396.157 0.15697751 3701;164 O00507;Q93008 USP9Y;USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-Y;Probable ubiquitin carboxyl-terminal hydrolase FAF-X no no 0 0 0 By MS/MS 2 0 2 2 99.262 94.527 2;3 1.6517E-152 116937 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 219.84 208.75 65243000 0 65243000 0 0 0 0 0 0 0 0 0 0 0 0 0 7053 164;3701 6450 59133;59134 46863;46864 46863 2 DFFLANASR Unmodified 1039.5087 0.50869399 841 P07384 CAPN1 Calpain-1 catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.65 68.729 2 0.0037093 78670 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 95.909 82.134 152110000 0 0 0 13635000 4793200 9388800 11532000 7601700 9042700 13616000 15105000 24149000 14650000 9054200 19541000 7054 841 6451 59135;59136;59137;59138;59139;59140;59141;59142;59143;59144;59145;59146 46865;46866;46867;46868;46869 46868 4 DFFQSYGNVVELR Unmodified 1572.7573 0.75725712 2263 Q13283 G3BP1 Ras GTPase-activating protein-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 86.715 86.784 2 1.1849E-12 100143 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 152.07 134.2 188850000 0 0 0 4806800 7687600 17118000 10557000 15071000 15042000 30189000 17233000 16157000 5568200 8758800 40666000 7055 2263 6452 59147;59148;59149;59150;59151;59152;59153;59154;59155;59156;59157;59158 46870;46871;46872;46873;46874;46875;46876;46877;46878;46879;46880;46881;46882;46883;46884;46885 46875 16 DFGDSLAR Unmodified 879.40865 0.4086456 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 40.014 40.165 2 0.011003 44659 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 77.923 33.391 293320000 0 0 0 15883000 21773000 20727000 31305000 0 30169000 38807000 46660000 56653000 0 0 31343000 7056 3023 6453 59159;59160;59161;59162;59163;59164;59165;59166;59167 46886;46887;46888;46889;46890;46891 46888 6 DFGGAVQDYFK Unmodified 1245.5666 0.5666028 4176 Q9BV44 THUMPD3 THUMP domain-containing protein 3 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 6 1 1 1 1 1 1 79.146 79.184 2 0.010549 91587 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 58.37 33.447 21570000 0 0 0 1242500 0 0 3166100 4906200 0 6229700 0 6025900 0 0 0 7057 4176 6454 59168;59169;59170;59171;59172;59173 46892;46893 46893 2 DFGLGPR Unmodified 760.38679 0.38678794 3265 Q8IXQ4 GPALPP1 GPALPP motifs-containing protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 45.973 46.328 2 0.040879 50915 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.398 34.545 21976000 0 0 0 0 2813400 0 0 0 0 0 6099400 4964200 0 0 8099200 7058 3265 6455 59174;59175;59176;59177 46894 46894 1 DFGNHQVTGK Unmodified 1101.5203 0.52032131 4807 Q9P260 KIAA1468 LisH domain and HEAT repeat-containing protein KIAA1468 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 15.179 15.37 2 0.039979 14243 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.058 23.094 21684000 0 0 0 1265100 945560 1534300 0 0 1023600 1686800 2406300 2969600 2701800 3230100 3920600 7059 4807 6456 59178;59179;59180;59181;59182;59183;59184;59185;59186;59187 46895 46895 1 DFGNYLFNFASAATK Unmodified 1664.7835 0.78347187 3732 Q96A49 SYAP1 Synapse-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 96.022 96.152 2 5.2981E-35 111591 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 152.4 145.38 14393000 0 0 0 0 0 0 0 0 0 4617500 0 0 0 978150 8797200 7060 3732 6457 59188;59189;59190 46896;46897 46897 2 DFGYVCETEFPAK Unmodified 1561.6759 0.67589525 812 P05549;Q6VUC0 TFAP2A;TFAP2E Transcription factor AP-2-alpha;Transcription factor AP-2-epsilon yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 74.9 75.012 2 0.0012048 86322 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 64.374 51.282 72959000 0 0 0 0 5197100 5826300 4474700 3784400 4279400 8217800 7201400 9191600 7586000 4544000 12656000 7061 812 6458 59191;59192;59193;59194;59195;59196;59197;59198;59199;59200;59201 46898;46899;46900;46901;46902;46903;46904;46905;46906;46907;46908 46900 11 DFHLIQANK Unmodified 1084.5665 0.56654322 3303 Q8N108 MIER1 Mesoderm induction early response protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 53.008 49.22 2 0.0016381 67581 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 134.48 97.718 48935000 35766000 0 4727200 0 0 0 0 0 0 0 0 0 0 0 8442100 7062 3303 6459 59202;59203;59204 46909;46910;46911 46910 3 DFHQLLLNPPK Unmodified 1320.719 0.71902112 469 O75170 PPP6R2 Serine/threonine-protein phosphatase 6 regulatory subunit 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 80.689 75.337 2;3 0.0050677 96845 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.344 61.344 44190000 35033000 0 9156900 0 0 0 0 0 0 0 0 0 0 0 0 7063 469 6460 59205;59206;59207 46912;46913;46914 46912 3 DFIDLTLSK Unmodified 1050.5597 0.55972651 4263 Q9BZE4 GTPBP4 Nucleolar GTP-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 82.418 82.501 2 0.0052698 95560 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 78.334 50.16 56728000 0 0 0 0 2888300 4605600 3704200 0 0 6036300 7611000 6583000 7256600 0 18043000 7064 4263 6461 59208;59209;59210;59211;59212;59213;59214;59215 46915;46916;46917;46918;46919;46920 46920 6 DFIDSLGLLHEQNMAK Oxidation (M) 1845.8931 0.89309867 3046 Q7L2H7 EIF3M Eukaryotic translation initiation factor 3 subunit M yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 6.8 3.92 2 3 2 1 1 1 87.355 85.48 2;3 2.5944E-31 106816 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.13 115.74 207450000 0 163790000 0 0 0 9722000 0 0 0 0 4813700 0 0 0 29125000 7065 3046 6462 59216;59217;59218;59219;59220 46921;46922;46923 46922 4669 3 DFIDSLGLLHEQNMAK Unmodified 1829.8982 0.89818405 3046 Q7L2H7 EIF3M Eukaryotic translation initiation factor 3 subunit M yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 91.877 87.199 3 9.0744E-09 109568 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.6 97.567 125720000 16613000 108240000 863370 0 0 0 0 0 0 0 0 0 0 0 0 7066 3046 6462 59221;59222;59223;59224 46924;46925;46926 46924 3 DFIGVDSTGK Unmodified 1037.5029 0.50293991 4593 Q9NR50 EIF2B3 Translation initiation factor eIF-2B subunit gamma yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 48.166 48.256 2 0.039105 54105 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 40.331 15.48 108840000 0 0 0 7811200 7342800 15957000 10030000 7926400 6789500 0 19129000 0 11724000 0 22125000 7067 4593 6463 59225;59226;59227;59228;59229;59230;59231;59232;59233 46927;46928 46927 2 DFIIFEAAPQETR Unmodified 1535.762 0.76200815 1811 P60510 PPP4C Serine/threonine-protein phosphatase 4 catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 85.989 86.096 2 2.5444E-05 99477 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 105.86 79.077 68590000 0 0 0 0 2727100 4286300 3620400 2869300 2845800 5656400 7249600 12159000 4329400 4199100 18647000 7068 1811 6464 59234;59235;59236;59237;59238;59239;59240;59241;59242;59243;59244 46929;46930;46931;46932;46933;46934;46935;46936;46937;46938;46939;46940;46941 46933 13 DFIIFEAAPQETRGIPSK Unmodified 2018.0473 0.047291129 1811 P60510 PPP4C Serine/threonine-protein phosphatase 4 catalytic subunit yes yes 0 0 1 By MS/MS 2 0 1 1 86.576 84.143 3 0.00070687 101852 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 57.499 47.75 5803800 0 0 5803800 0 0 0 0 0 0 0 0 0 0 0 0 7069 1811 6465 59245 46942 46942 1 DFIILSCVR Unmodified 1121.5903 0.59031513 3683 Q92900 UPF1 Regulator of nonsense transcripts 1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 83.862 83.986 2 0.014773 96924 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.96 6.1055 17150000 0 0 0 0 0 0 0 0 0 3132500 0 4320900 1963100 2856400 4876700 7070 3683 6466 59246;59247;59248;59249;59250 46943;46944;46945 46943 3 DFIIQTGDPTGTGR Unmodified 1476.7209 0.72087161 3537 Q8WUA2 PPIL4 Peptidyl-prolyl cis-trans isomerase-like 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.457 66.542 2 3.8815E-13 75593 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.39 78.067 79184000 0 0 0 5292800 4184000 5484500 5198700 5855900 3738600 6675000 8101300 8257300 8442300 6173400 11780000 7071 3537 6467 59251;59252;59253;59254;59255;59256;59257;59258;59259;59260;59261;59262 46946;46947;46948;46949;46950;46951;46952;46953;46954;46955;46956;46957;46958 46949 13 DFILFTK Unmodified 882.48511 0.485105 5299 Q9Y6X9 MORC2 MORC family CW-type zinc finger protein 2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 81.68 81.723 2 0.035265 94535 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 70.912 42.047 37347000 0 0 0 2364600 2251900 4679500 0 3188500 3501800 4604100 4132500 6940700 0 0 5683800 7072 5299 6468 59263;59264;59265;59266;59267;59268;59269;59270;59271 46959 46959 1 DFINFISDK Unmodified 1097.5393 0.53932542 4380 Q9H3N1 TMX1 Thioredoxin-related transmembrane protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 83.586 83.649 2 0.0077875 96881 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 71.501 63.569 87839000 0 0 0 3204200 3376800 5414900 7434200 11442000 8020600 7354600 8324800 9019100 7316200 9000400 7931200 7073 4380 6469 59272;59273;59274;59275;59276;59277;59278;59279;59280;59281;59282;59283 46960;46961;46962;46963;46964;46965;46966;46967;46968;46969;46970;46971;46972;46973 46960 14 DFISVLR Unmodified 848.4756 0.47560295 5154 Q9Y3B9 RRP15 RRP15-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.498 77.556 2 0.023419 88904 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.121 43.153 149830000 0 0 0 11166000 8535600 8497200 8037200 9455900 8512000 11382000 15588000 20144000 11284000 11981000 25251000 7074 5154 6470 59284;59285;59286;59287;59288;59289;59290;59291;59292;59293;59294;59295 46974;46975;46976;46977;46978;46979 46976 6 DFKPGDLIFAK Unmodified 1249.6707 0.67067394 505 O75475 PSIP1 PC4 and SFRS1-interacting protein yes yes 0 0 1 By matching By matching By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 80.437 80.601 3 0.00043165 93185 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.64 51.048 150130000 0 0 0 0 0 0 0 867300 0 17996000 18229000 27990000 0 16874000 68175000 7075 505 6471 59296;59297;59298;59299;59300;59301 46980;46981;46982 46982 1 DFLAGGIAAAISK Unmodified 1232.6765 0.6764876 963 P12236 SLC25A6 ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed yes yes 0 0 0 By MS/MS 10 0 1 1 86.032 86.2 2 0.037516 99630 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.829 19.445 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7076 963 6472 59302 46983 46983 1 DFLDEHYDIPK Unmodified 1390.6405 0.64049603 3427 Q8NEM2 SHCBP1 SHC SH2 domain-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74.037 73.045 3 0.0013879 91367 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.44 61.272 255560000 24547000 77036000 5596200 5330200 5251500 15927000 6635900 8473800 8948700 14948000 13458000 14779000 15087000 11035000 28508000 7077 3427 6473 59303;59304;59305;59306;59307;59308;59309;59310;59311;59312;59313;59314;59315;59316;59317 46984;46985;46986;46987;46988;46989;46990;46991;46992 46986 9 DFLDMNFQSLAMK 2 Oxidation (M) 1590.7058 0.70581517 3542 Q8WUF5 PPP1R13L RelA-associated inhibitor yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 2 1 1 1 2 1 1 2 2 1 1 1 83.236 83.283 2 0.00024055 96320 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 71.221 51.231 117210000 0 0 0 5939500 4815600 10083000 5351700 13957000 7595500 10931000 9130700 17085000 9190800 5743700 17389000 7078 3542 6474 59318;59319;59320;59321;59322;59323;59324;59325;59326;59327;59328;59329;59330;59331;59332;59333 46993;46994;46995;46996;46997;46998;46999;47000;47001;47002;47003;47004;47005;47006;47007 46993 5033;5034 13 DFLDMNFQSLAMK Oxidation (M) 1574.7109 0.71090055 3542 Q8WUF5 PPP1R13L RelA-associated inhibitor yes yes 0 1 0 By MS/MS 10 0 1 1 90.682 90.821 2 0.00048446 105175 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.349 63.703 2631300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2631300 7079 3542 6474 59334 47008 47008 5033;5034 1 DFLEAVNK Unmodified 934.476 0.47599688 1369 P35998 PSMC2 26S protease regulatory subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.45 3.11 3 1 16 1 2 1 1 1 1 1 1 1 2 2 2 1 1 2 57.479 56.505 1;2 0.0063409 64837 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 101.69 69.22 1835800000 49677000 701790000 20366000 75012000 96103000 94631000 39496000 35569000 25763000 150680000 198830000 180750000 35501000 53220000 78422000 7080 1369 6475 59335;59336;59337;59338;59339;59340;59341;59342;59343;59344;59345;59346;59347;59348;59349;59350;59351;59352;59353;59354 47009;47010;47011;47012;47013;47014;47015;47016;47017;47018;47019;47020;47021;47022;47023;47024;47025;47026;47027 47011 18 DFLEPLLEAK Unmodified 1173.6281 0.62814043 2870 Q6DHV7 ADAL Adenosine deaminase-like protein yes yes 0 0 0 By MS/MS 2 0 1 1 92.068 87.158 2 0.0083376 108230 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.645 56.751 35329000 0 35329000 0 0 0 0 0 0 0 0 0 0 0 0 0 7081 2870 6476 59355 47028 47028 1 DFLFQAK Unmodified 867.44905 0.44905385 503 O75462 CRLF1 Cytokine receptor-like factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 67.058 67.21 2 0.044016 76745 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 66.994 40.885 36243000 0 0 0 0 2881700 2328200 3060700 3297700 2268400 2768300 4082500 3741900 4014000 2962800 4836900 7082 503 6477 59356;59357;59358;59359;59360;59361;59362;59363;59364;59365;59366 47029 47029 1 DFLFTPTEVLR Unmodified 1336.7027 0.70270235 2375 Q14147 DHX34 Probable ATP-dependent RNA helicase DHX34 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 92.059 92.195 2 0.0064345 107067 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 56.563 37.292 6395400 0 0 0 0 0 895620 589070 704470 501940 915490 0 0 0 628560 2160200 7083 2375 6478 59367;59368;59369;59370;59371;59372;59373 47030;47031;47032;47033;47034;47035;47036 47030 7 DFLGSSEESEK Unmodified 1226.5303 0.53027687 2517 Q15334 LLGL1 Lethal(2) giant larvae protein homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.25 3.34 2 1 1 1 2 1 41.276 35.779 2 4.6815E-09 46461 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.45 124.56 59094000 3883500 55210000 0 0 0 0 0 0 0 0 0 0 0 0 0 7084 2517 6479 59374;59375;59376;59377 47037;47038;47039;47040 47037 4 DFLLKPELLR Unmodified 1242.7336 0.73360855 2347;118 O00148;Q13838 DDX39A;DDX39B ATP-dependent RNA helicase DDX39A;Spliceosome RNA helicase DDX39B no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 83.252 83.297 3 0.0024675 95948 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.652 61.833 121850000 0 0 0 2548000 0 21535000 0 0 0 0 25158000 10368000 0 9276500 52962000 7085 118;2347 6480 59378;59379;59380;59381;59382;59383 47041 47041 1 DFLLQQTMLR Oxidation (M) 1279.6595 0.65945733 2106 Q04760 GLO1 Lactoylglutathione lyase yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 2 76.589 76.765 2 0.0027173 87681 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 73.985 61.458 97131000 0 0 0 0 0 0 0 0 0 0 0 25908000 1759300 14125000 55339000 7086 2106 6481 59384;59385;59386;59387;59388 47042;47043;47044;47045 47044 3409 3 DFLLQQTMLR Unmodified 1263.6645 0.66454271 2106 Q04760 GLO1 Lactoylglutathione lyase yes yes 0 0 0 By MS/MS 10 0 1 1 84.288 84.425 2 0.0095689 97989 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 95.358 84.139 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7087 2106 6481 59389 47046 47046 1 DFLLTAR Unmodified 834.45995 0.45995289 1945 P63173 RPL38 60S ribosomal protein L38 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.914 64.005 2 0.015408 73057 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 118.01 43.294 4232300000 0 0 0 265490000 287850000 379480000 291970000 263750000 256750000 373090000 448330000 496280000 378570000 321900000 468840000 7088 1945 6482 59390;59391;59392;59393;59394;59395;59396;59397;59398;59399;59400;59401 47047;47048;47049;47050;47051;47052;47053;47054;47055;47056;47057;47058;47059;47060;47061;47062;47063;47064 47058 18 DFLPEGEDVHNFLLEQK Unmodified 2028.9793 0.97927114 329 O43432 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 0 0 0 By MS/MS 2 0 1 1 90.984 82.854 3 0.00010741 107538 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.748 61.584 9515100 9515100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7089 329 6483 59402 47065;47066 47066 2 DFLQGSSCIAGIYNETTK Unmodified 2002.9306 0.93060639 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 7.5 3.55 2 2 8 4 1 1 1 1 1 1 1 1 84.038 82.723 2;3 2.0674E-07 101570 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.728 80.47 166700000 0 123720000 0 7093900 3875400 3490800 1746400 4704200 4632500 10811000 0 0 0 0 6626600 7090 1029 6484 59403;59404;59405;59406;59407;59408;59409;59410;59411;59412;59413;59414 47067;47068;47069;47070;47071;47072;47073;47074;47075;47076 47070 10 DFLQSDEAR Unmodified 1079.4884 0.48835248 3149 Q86UK7 ZNF598 Zinc finger protein 598 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 39.92 39.96 2 0.011616 44368 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 62.546 39.967 16879000 0 0 0 3252100 0 0 0 3661900 0 4810400 0 0 5154400 0 0 7091 3149 6485 59415;59416;59417;59418;59419;59420 47077;47078;47079 47079 3 DFLSGIQK Unmodified 906.48108 0.48108226 276 O15357 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 63.506 62.928 2 0.0096192 71167 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.305 59.268 216120000 0 105750000 0 7753300 0 14709000 0 13190000 9084800 15116000 0 0 14315000 14643000 21554000 7092 276 6486 59421;59422;59423;59424;59425;59426;59427;59428;59429;59430 47080;47081;47082 47081 2 DFLSVMLEK Unmodified 1080.5525 0.55253264 5112 Q9Y2Q3 GSTK1 Glutathione S-transferase kappa 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 90.277 89.803 2 0.009002 104204 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 67.993 50.144 30952000 0 12245000 288650 0 981160 1871400 921280 1141500 1760400 1635200 1921200 1404300 851670 1532100 4397800 7093 5112 6487 59431;59432;59433;59434;59435;59436;59437;59438;59439;59440;59441;59442;59443 47083;47084;47085;47086;47087;47088 47083 6 DFLTPPLLSVR Unmodified 1256.7129 0.71287311 689 O95782 AP2A1 AP-2 complex subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 91.776 91.894 2 0.013096 106430 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.891 40.856 5173500 0 0 0 0 0 971050 0 581840 0 1045900 0 0 0 595700 1979000 7094 689 6488 59444;59445;59446;59447;59448 47089 47089 1 DFLVGQDRCADVTLEGQVYPGK Unmodified 2466.1849 0.1849236 2440 Q14696 MESDC2 LDLR chaperone MESD yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 82.584 76.656 3 3.954E-40 98439 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 124.35 111.42 48912000 48912000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7095 2440 6489 59449;59450 47090;47091;47092 47091 3 DFLYSYFK Unmodified 1081.512 0.51204804 896 P09960 LTA4H Leukotriene A-4 hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 85.169 83.26 2 0.011111 96977 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.674 40.653 42516000 21400000 0 0 0 0 0 0 0 0 0 3684400 0 0 2403500 15028000 7096 896 6490 59451;59452;59453;59454 47093;47094;47095 47093 3 DFMFQPLDGLK Oxidation (M) 1325.6326 0.63257388 2529 Q15398 DLGAP5 Disks large-associated protein 5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 85.589 85.725 2 0.0044993 99561 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.567 42.514 10859000 0 0 0 0 0 0 0 0 0 2693500 0 2687100 0 0 5478300 7097 2529 6491 59455;59456;59457 47096;47097;47098 47098 4166 3 DFMFQPLDGLK Unmodified 1309.6377 0.63765925 2529 Q15398 DLGAP5 Disks large-associated protein 5 yes yes 0 0 0 By MS/MS 2 0 1 1 94.842 89.978 2 0.0017501 111616 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.624 74.777 17503000 0 17503000 0 0 0 0 0 0 0 0 0 0 0 0 0 7098 2529 6491 59458 47099 47099 1 DFMIQGGDFTR Oxidation (M) 1301.571 0.57103625 1153 P23284 PPIB Peptidyl-prolyl cis-trans isomerase B yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 67.1 67.179 2 0.006014 77324 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 50.834 43.614 45488000 0 0 0 2658200 0 7376400 3757200 3303900 3882100 0 8560000 11558000 4391800 0 0 7099 1153 6492 59459;59460;59461;59462;59463;59464;59465;59466 47100;47101;47102;47103;47104;47105 47104 1661 6 DFMIQGGDFTR Unmodified 1285.5761 0.57612163 1153 P23284 PPIB Peptidyl-prolyl cis-trans isomerase B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 74.91 74.954 2 0.00033932 85898 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.681 81.009 69140000 0 0 0 1687600 2432400 3439700 0 3646000 0 3631800 9430200 10867000 2507100 7093200 24405000 7100 1153 6492 59467;59468;59469;59470;59471;59472;59473;59474;59475;59476 47106;47107;47108;47109;47110;47111;47112;47113;47114 47108 9 DFMIQGGDFTRGDGTGGK Oxidation (M) 1873.8265 0.82647567 1153 P23284 PPIB Peptidyl-prolyl cis-trans isomerase B yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.76 3.87 6 1 10 2 3 2 1 1 1 1 1 1 1 1 1 1 61.502 59.207 2;3 7.2617E-12 75474 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.23 97.02 660040000 106580000 307060000 47867000 10326000 0 8767100 12001000 12487000 0 11120000 26946000 30597000 12614000 17488000 56176000 7101 1153 6493 59477;59478;59479;59480;59481;59482;59483;59484;59485;59486;59487;59488;59489;59490;59491;59492;59493 47115;47116;47117;47118;47119;47120;47121;47122;47123;47124;47125;47126;47127;47128;47129;47130 47117 1661 13 DFMIQGGDFTRGDGTGGK Unmodified 1857.8316 0.83156105 1153 P23284 PPIB Peptidyl-prolyl cis-trans isomerase B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68.025 66.89 3 9.2957E-05 76062 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.693 48.059 297560000 99899000 17086000 17065000 0 2831500 6621400 3567600 9012800 4478000 6100200 15894000 20492000 0 13263000 81251000 7102 1153 6493 59494;59495;59496;59497;59498;59499;59500;59501;59502;59503;59504;59505;59506;59507 47131;47132;47133;47134;47135;47136;47137;47138;47139;47140;47141;47142;47143;47144;47145;47146;47147 47137 17 DFMIQGGDPTGTGR Unmodified 1450.6511 0.65107749 5157 Q9Y3C6 PPIL1 Peptidyl-prolyl cis-trans isomerase-like 1 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 58.559 58.816 2 2.1722E-05 66962 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 87.568 73.976 72405000 0 0 0 0 0 5245700 4322200 5424500 3137000 8540200 9432400 6604700 5743400 8061400 15893000 7103 5157 6494 59508;59509;59510;59511;59512;59513;59514;59515;59516;59517 47148;47149;47150;47151;47152;47153;47154;47155 47149 8 DFMIQGGDPTGTGR Oxidation (M) 1466.646 0.64599211 5157 Q9Y3C6 PPIL1 Peptidyl-prolyl cis-trans isomerase-like 1 yes yes 0 1 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 49.581 49.941 2 0.0048944 56462 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 62.303 50.455 21132000 0 0 0 0 0 0 6223100 0 0 0 0 0 8373000 0 6536100 7104 5157 6494 59518;59519;59520 47156;47157 47156 6533 0 DFMIQGGDPTGTGRGGASIYGK Unmodified 2184.027 0.026966392 5157 Q9Y3C6 PPIL1 Peptidyl-prolyl cis-trans isomerase-like 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 71.251 67.968 3 0.00035171 88189 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.027 41.048 2005900 0 0 2005900 0 0 0 0 0 0 0 0 0 0 0 0 7105 5157 6495 59521;59522 47158;47159;47160 47158 3 DFMQPPASRVQNGES Unmodified 1661.7468 0.74676879 3087 Q7Z3U7 MON2 Protein MON2 homolog yes yes 0 0 1 By MS/MS 2 0 1 1 55.171 49.365 2 0.017453 63686 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.466 51.366 25617000 0 25617000 0 0 0 0 0 0 0 0 0 0 0 0 0 7106 3087 6496 59523 47161 47161 1 DFMRQAGEVTYADAHK Unmodified 1837.8417 0.8417318 2260 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 yes yes 0 0 1 By MS/MS By MS/MS 2 0 4 2 2 59.072 53.025 3;4 0.0084619 66360 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 43.37 39.268 38496000 32308000 0 6188100 0 0 0 0 0 0 0 0 0 0 0 0 7107 2260 6497 59524;59525;59526;59527 47162;47163 47163 2 DFMRQAGEVTYADAHK Oxidation (M) 1853.8366 0.83664643 2260 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 yes yes 0 1 1 By MS/MS 2 0 1 1 40.603 36.993 3 0.0055173 46661 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 46.121 10.629 18255000 0 0 18255000 0 0 0 0 0 0 0 0 0 0 0 0 7108 2260 6497 59528 47164 47164 3679 1 DFNDIRQDFLPWK Unmodified 1692.826 0.82600539 583;4140 O94776;Q9BTC8 MTA2;MTA3 Metastasis-associated protein MTA2;Metastasis-associated protein MTA3 no no 0 0 1 By MS/MS 2 0 1 1 93.952 85.822 3 0.034333 111096 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 32.624 24.447 8052100 8052100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7109 583;4140 6498 59529 47165 47165 1 DFNLELAIK Unmodified 1061.5757 0.57571092 1291 P30876 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 0 0 0 By MS/MS 2 0 1 1 89.242 81.112 2 0.01494 105425 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.548 59.417 4015400 4015400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7110 1291 6499 59530 47166 47166 1 DFNMPLTISSLK Unmodified 1364.701 0.70098779 3865 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.79 2.8 2 1 16 2 1 1 2 1 1 1 2 2 2 1 1 2 76.691 76.318 2 9.2407E-13 109080 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.17 107.47 720660000 0 234630000 1092700 0 1767200 88306000 1026100 2557200 1591000 58504000 73366000 88689000 77388000 4336300 87411000 7111 3865 6500 59531;59532;59533;59534;59535;59536;59537;59538;59539;59540;59541;59542;59543;59544;59545;59546;59547;59548;59549 47167;47168;47169;47170;47171;47172;47173;47174;47175;47176;47177 47169 11 DFNMPLTISSLK Oxidation (M) 1380.6959 0.69590241 3865 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 yes yes 0 1 0 By MS/MS By matching 2.4 0.49 3 2 4 1 81.696 77.989 2 2.8749E-05 96962 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.95 88.917 127800000 0 126320000 1471900 0 0 0 0 0 0 0 0 0 0 0 0 7112 3865 6500 59550;59551;59552;59553;59554 47178;47179;47180 47178 5374 2 DFNSELLR Unmodified 992.49271 0.49270958 4664 Q9NVC6 MED17 Mediator of RNA polymerase II transcription subunit 17 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.309 62.406 2 0.014742 70362 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 69.998 32.905 67182000 0 0 0 3364600 3234900 5623200 5254600 5201200 3590000 7064700 6000200 6678600 5884200 5081400 10204000 7113 4664 6501 59555;59556;59557;59558;59559;59560;59561;59562;59563;59564;59565;59566 47181;47182;47183;47184;47185;47186;47187 47186 7 DFNVPLSISR Unmodified 1146.6033 0.60332266 4585 Q9NR12 PDLIM7 PDZ and LIM domain protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 79.253 79.209 2 0.006405 91264 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.654 44.029 44951000 0 0 0 3741700 4080700 0 7213300 0 0 12985000 0 0 0 0 16930000 7114 4585 6502 59567;59568;59569;59570;59571 47188;47189;47190;47191;47192 47189 5 DFPAVDSVLVK Unmodified 1188.639 0.63903946 2774 Q5T447 HECTD3 E3 ubiquitin-protein ligase HECTD3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 82.287 82.292 2 0.042542 95275 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 36.424 23.047 20216000 0 0 0 867860 1843100 0 1386100 0 0 4272200 4092000 5327100 2427800 0 0 7115 2774 6503 59572;59573;59574;59575;59576;59577;59578 47193;47194 47193 2 DFPELTMEVDGK Unmodified 1379.6279 0.62788243 1398 P38606 ATP6V1A V-type proton ATPase catalytic subunit A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 80.66 80.795 2 0.031911 93124 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.671 16.884 14581000 0 0 0 0 0 0 0 0 0 0 0 0 4185000 3969700 6426600 7116 1398 6504 59579;59580;59581 47195 47195 1 DFPETNNILK Unmodified 1189.5979 0.59790293 1612 P49915 GMPS GMP synthase [glutamine-hydrolyzing] yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 72.547 67.103 2 0.0058707 87406 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.498 64.711 1964000000 68989000 1887400000 7595100 0 0 0 0 0 0 0 0 0 0 0 0 7117 1612 6505 59582;59583;59584;59585 47196;47197;47198;47199;47200 47200 5 DFPEYTFAIADEEDYAGEVK Unmodified 2308.0059 0.0059394035 982 P13667 PDIA4 Protein disulfide-isomerase A4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 3 3 1 91.409 86.838 2;3 3.0834E-29 109984 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 150.05 147.1 338930000 158360000 171200000 9368800 0 0 0 0 0 0 0 0 0 0 0 0 7118 982 6506 59586;59587;59588;59589;59590;59591;59592 47201;47202;47203;47204;47205;47206;47207 47201 7 DFPLHLGK Unmodified 925.50215 0.50215205 2427 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.76 65.847 2 0.047688 74538 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 47.743 6.8224 41928000 0 0 0 1201000 1186700 2805600 2099300 1834800 1958400 4444700 4025600 5688800 4699300 4538900 7444900 7119 2427 6507 59593;59594;59595;59596;59597;59598;59599;59600;59601;59602;59603;59604 47208 47208 1 DFPLNDLLSATELDK Unmodified 1689.8461 0.8461317 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 6.56 3.86 3 1 5 1 2 1 1 1 1 1 1 97.704 95.719 2 3.3498E-12 116823 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.5 98.038 344980000 67763000 250170000 11414000 0 0 0 0 1015100 0 3841600 2148600 0 0 1529900 7097700 7120 2392 6508 59605;59606;59607;59608;59609;59610;59611;59612;59613 47209;47210;47211;47212;47213;47214;47215;47216 47210 7 DFPPAAAQVAHQK Unmodified 1378.6993 0.69934831 1651 P51397 DAP Death-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.5 3.44 8 5 5 5 5 3 2 1 1 1 49.57 45.667 2;3 3.3168E-12 62230 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 138.98 119.19 633090000 106540000 423060000 37879000 0 0 0 0 0 0 0 16161000 12793000 0 14956000 21706000 7121 1651 6509 59614;59615;59616;59617;59618;59619;59620;59621;59622;59623;59624;59625;59626;59627;59628;59629;59630;59631 47217;47218;47219;47220;47221;47222;47223;47224;47225;47226;47227;47228;47229;47230;47231;47232;47233;47234;47235;47236;47237;47238;47239;47240;47241;47242;47243;47244;47245;47246;47247;47248;47249;47250;47251;47252 47243 32 DFPSFAQLTMK Unmodified 1283.622 0.62200919 1717 P53602 MVD Diphosphomevalonate decarboxylase yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 87.131 87.308 2 0.036836 101061 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.344 24.717 4888300 0 0 0 0 0 0 0 2248300 0 0 0 0 0 0 2640000 7122 1717 6510 59632;59633 47253 47253 1 DFPVESVK Unmodified 919.4651 0.46509784 4376 Q9H307 PNN Pinin yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.617 48.777 2 0.025333 55024 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 58.782 40.458 209370000 0 0 0 10074000 12756000 16390000 13748000 13175000 12052000 17398000 17801000 30972000 22906000 15223000 26872000 7123 4376 6511 59634;59635;59636;59637;59638;59639;59640;59641;59642;59643;59644;59645 47254;47255;47256 47255 3 DFQAIADVIGNK Unmodified 1289.6616 0.66156582 4820 Q9P2K3 RCOR3 REST corepressor 3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 2 2 1 1 1 1 1 1 1 1 1 1 1 1 84.091 83.527 2 0.00051408 96630 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.937 81.414 159080000 726590 47563000 1769600 2755300 4626300 8581300 7592300 12627000 8847800 10803000 11605000 11911000 6367300 8990300 14312000 7124 4820 6512 59646;59647;59648;59649;59650;59651;59652;59653;59654;59655;59656;59657;59658;59659;59660;59661;59662 47257;47258;47259;47260;47261;47262;47263;47264;47265 47259 9 DFQAISDVIGNK Unmodified 1305.6565 0.65648044 4971 Q9UKL0 RCOR1 REST corepressor 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 79.056 79.081 2 2.8825E-05 90600 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 121.5 90.816 147960000 0 0 0 7224000 10391000 14319000 13562000 11667000 11692000 19391000 0 29261000 15054000 15397000 0 7125 4971 6513 59663;59664;59665;59666;59667;59668;59669;59670;59671;59672 47266;47267;47268;47269;47270 47268 5 DFQALNPMK Oxidation (M) 1078.5117 0.51173046 357 O43708 GSTZ1 Maleylacetoacetate isomerase yes yes 0 1 0 By MS/MS 2 0 1 1 49.562 43.855 2 0.007636 57049 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.142 60.63 18009000 0 18009000 0 0 0 0 0 0 0 0 0 0 0 0 0 7126 357 6514 59673 47271 47271 456 1 DFQALNPMK Unmodified 1062.5168 0.51681584 357 O43708 GSTZ1 Maleylacetoacetate isomerase yes yes 0 0 0 By MS/MS 2 0 1 1 70.297 64.48 2 0.012233 81968 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.227 71.239 50183000 0 50183000 0 0 0 0 0 0 0 0 0 0 0 0 0 7127 357 6514 59674 47272 47272 1 DFQEETVK Unmodified 994.46074 0.46074075 2961 Q6PKG0 LARP1 La-related protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 26.909 26.893 2 0.043235 28842 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 49.325 33.171 53861000 0 0 0 14394000 0 13958000 13832000 0 11677000 0 0 0 0 0 0 7128 2961 6515 59675;59676;59677;59678 47273 47273 1 DFQEVTLEK Unmodified 1107.5448 0.54480473 4419 Q9H6Q4;Q9UHQ1 NARFL;NARF Cytosolic Fe-S cluster assembly factor NARFL;Nuclear prelamin A recognition factor yes no 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 58.213 51.189 2 0.025718 66183 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.256 48.728 133550000 6987000 126570000 0 0 0 0 0 0 0 0 0 0 0 0 0 7129 4419 6516 59679;59680 47274 47274 1 DFQGTPTFTYK Unmodified 1303.6085 0.60846762 2587 Q15833 STXBP2 Syntaxin-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 65.139 64.457 2 0.0005124 74171 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 82.831 68.137 316400000 0 256640000 0 3775500 1464900 7576800 4061300 3037700 2783400 5402800 7443700 6855900 3880700 4455300 9020900 7130 2587 6517 59681;59682;59683;59684;59685;59686;59687;59688;59689;59690;59691;59692;59693;59694 47275;47276;47277;47278;47279;47280;47281 47276 6 DFQHRPGGK Unmodified 1040.5152 0.51517635 2534 Q15428 SF3A2 Splicing factor 3A subunit 2 yes yes 0 0 1 By MS/MS 2 0 1 1 40.982 34.301 2 0.023695 47467 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 114.99 87.85 4808400 4808400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7131 2534 6518 59695 47282 47282 1 DFQLRQPPAVPAR Unmodified 1493.8103 0.81029574 2021 P98082 DAB2 Disabled homolog 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.723 61.823 3 1.2432E-09 70520 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 104.59 82.361 158700000 0 0 0 6052100 5727700 5876800 12218000 10138000 9443700 15287000 16571000 18608000 11309000 11461000 36008000 7132 2021 6519 59696;59697;59698;59699;59700;59701;59702;59703;59704;59705;59706;59707 47283;47284;47285;47286;47287;47288;47289;47290;47291;47292;47293;47294;47295;47296;47297;47298 47291 16 DFQLRQPPAVPARK Unmodified 1621.9053 0.90525876 2021 P98082 DAB2 Disabled homolog 2 yes yes 0 0 2 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 2 51.14 51.418 3;4 0.00099753 56876 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.469 38.861 98460000 0 0 0 0 0 7995600 7587900 7336000 15380000 4704400 0 0 0 7564400 47892000 7133 2021 6520 59708;59709;59710;59711;59712;59713;59714;59715 47299;47300;47301;47302;47303 47302 5 DFQPSRSTAQQELDGKPASPTPVIVASHTANK Unmodified 3376.7011 0.70114581 1358 P35606 COPB2 Coatomer subunit beta' yes yes 0 0 2 By MS/MS 2 0 2 2 71.001 62.734 4;5 4.1639E-10 83491 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.583 46.712 45923000 45923000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7134 1358 6521 59716;59717 47304;47305;47306 47304 3 DFQSGQHVIVR Unmodified 1284.6575 0.65748349 1504 P46459 NSF Vesicle-fusing ATPase yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 2 1 1 1 1 1 1 1 1 38.462 38.57 2;3 0.012697 43410 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 55.567 31.412 46650000 0 0 0 10867000 3267400 3367900 5068500 0 0 3334200 4119200 6414200 3941900 0 6270100 7135 1504 6522 59718;59719;59720;59721;59722;59723;59724;59725;59726;59727 47307;47308;47309 47309 3 DFQYNEEEMK Unmodified 1331.534 0.53398204 1122 P21283 ATP6V1C1 V-type proton ATPase subunit C 1 yes yes 0 0 0 By MS/MS 10 0 1 1 45.451 46.192 2 0.016645 50908 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.418 44.071 7718900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7718900 7136 1122 6523 59728 47310 47310 1 DFRDHAEQQHIAAQQK Unmodified 1920.9191 0.91907092 4614 Q9NRY2 INIP SOSS complex subunit C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 22.978 23.265 4 0.00043384 23467 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.469 52.939 84315000 0 0 0 0 4797000 0 0 8706900 0 0 0 34351000 0 0 36461000 7137 4614 6524 59729;59730;59731;59732 47311;47312;47313 47312 3 DFRFMATNDLMTELQK Oxidation (M) 1974.9179 0.91793321 3170 Q86VP6 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 1 1 By MS/MS 2 0 1 1 89.816 81.686 3 0.000837 106178 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.127 44.821 6881700 6881700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7138 3170 6525 59733 47314 47314 4785;4786 1 DFRFMATNDLMTELQK Unmodified 1958.923 0.92301859 3170 Q86VP6 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 94.528 86.398 3 0.0088484 111721 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.913 18.12 31996000 31996000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7139 3170 6525 59734 47315 47315 1 DFSAEYEEDGK Unmodified 1288.5095 0.50954143 774 P04114 APOB Apolipoprotein B-100;Apolipoprotein B-48 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 38.513 38.801 2 0.00051485 43237 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 82.749 79.178 16917000 0 0 0 0 0 2866600 0 2160100 0 3202300 0 4428800 2210800 2048700 0 7140 774 6526 59735;59736;59737;59738;59739;59740 47316;47317;47318;47319 47316 4 DFSALESQLQDTQELLQEENR Unmodified 2492.1667 0.16669058 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 94.797 94.85 3 0.0010384 110283 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 24.548 21.15 8382200 0 0 0 1678200 0 0 0 0 0 2919300 1486000 0 0 0 2298700 7141 1356 6527 59741;59742;59743;59744 47320;47321;47322;47323;47324 47320 5 DFSALESQLQDTQELLQEENRQK Unmodified 2748.3202 0.3202311 1356 P35579 MYH9 Myosin-9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.12 3.89 3 1 4 1 2 1 1 1 1 1 93.073 90.756 3 0 113094 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 270 261.33 253540000 69346000 120760000 45479000 2539600 0 0 0 0 0 5530300 3501800 0 0 0 6380600 7142 1356 6528 59745;59746;59747;59748;59749;59750;59751;59752 47325;47326;47327;47328;47329;47330;47331;47332;47333;47334;47335 47331 10 DFSAPTLEDHFNK Unmodified 1519.6943 0.69432251 1756 P55081 MFAP1 Microfibrillar-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 2 1 1 2 2 1 66.557 66.618 2;3 0.0012071 76201 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 93.096 68.32 115490000 0 0 0 13565000 11817000 6504600 0 0 7923200 14562000 7388600 0 20025000 16321000 17383000 7143 1756 6529 59753;59754;59755;59756;59757;59758;59759;59760;59761;59762;59763;59764;59765 47336;47337;47338;47339;47340 47340 2 DFSESRNNRFSTPEQAAK Unmodified 2082.9719 0.97189435 1008 P14866 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes yes 0 0 2 By MS/MS 2 0 1 1 43.197 36.404 3 0.00045744 49947 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.738 56.685 185440000 185440000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7144 1008 6530 59766 47341 47341 1 DFSFRYQQELEEEIK Unmodified 1959.9214 0.92142191 2869 Q6DD88 ATL3 Atlastin-3 yes yes 0 0 1 By MS/MS 2 0 1 1 87.077 78.947 3 0.0001361 102881 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.692 72.373 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7145 2869 6531 59767 47342 47342 1 DFSGDMCK Unmodified 958.35245 0.35245263 1053 P17480 UBTF Nucleolar transcription factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 26.67 26.893 2 0.030197 28886 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 55.676 46.436 150390000 0 0 0 9672300 8211500 14390000 0 0 9118700 13289000 19068000 34965000 14056000 12978000 14643000 7146 1053 6532 59768;59769;59770;59771;59772;59773;59774;59775;59776;59777 47343;47344 47344 2 DFSGGWR Unmodified 823.3613 0.36130147 4879 Q9UG63 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.902 43.077 2 0.027199 47821 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 77.72 77.72 157980000 0 0 0 8967100 10128000 9044700 12269000 13774000 7300800 15418000 16541000 16860000 16588000 11223000 19865000 7147 4879 6533 59778;59779;59780;59781;59782;59783;59784;59785;59786;59787;59788;59789 47345;47346;47347;47348;47349 47347 5 DFSGVSDTDNSSMK Unmodified 1488.6039 0.60385252 5064 Q9UPZ3 HPS5 Hermansky-Pudlak syndrome 5 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 38.102 38.251 2 0.0012757 42565 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 75.819 69.516 32646000 0 0 0 2278000 2749800 0 2382100 3945000 1768000 4052300 0 4964600 0 3405800 7100700 7148 5064 6534 59790;59791;59792;59793;59794;59795;59796;59797;59798 47350;47351;47352;47353;47354;47355;47356 47351 6 DFSHPQMPK Oxidation (M) 1101.4913 0.49132937 1548 P48643 CCT5 T-complex protein 1 subunit epsilon yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.66 6 1 15 2 3 2 1 1 2 2 1 1 1 2 1 1 2 20.826 19.603 2 0.0021545 20796 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 90.601 62.494 501390000 56741000 238610000 81136000 5271400 4517500 11326000 14680000 5178600 0 13022000 12197000 13217000 10407000 7329600 27754000 7149 1548 6535 59799;59800;59801;59802;59803;59804;59805;59806;59807;59808;59809;59810;59811;59812;59813;59814;59815;59816;59817;59818;59819;59820 47357;47358;47359;47360;47361;47362;47363;47364;47365;47366;47367;47368;47369;47370;47371;47372;47373;47374;47375;47376;47377;47378 47359 2459 21 DFSHPQMPK Unmodified 1085.4964 0.49641475 1548 P48643 CCT5 T-complex protein 1 subunit epsilon yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 40.245 39.472 2 0.0033124 43859 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 93.429 71.658 709180000 0 297500000 59548000 10265000 15151000 32456000 18640000 16546000 17157000 34244000 43556000 38743000 21776000 30674000 72930000 7150 1548 6535 59821;59822;59823;59824;59825;59826;59827;59828;59829;59830;59831;59832;59833;59834;59835 47379;47380;47381;47382;47383;47384;47385;47386;47387;47388;47389;47390;47391;47392;47393;47394;47395;47396 47387 15 DFSHTGRGK Unmodified 1003.4835 0.48354187 1332 P33991 MCM4 DNA replication licensing factor MCM4 yes yes 0 0 1 By MS/MS By matching 2 0 2 1 1 6.3715 3.5466 2 0.02921 6386 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 113.5 89.532 455390000 450780000 0 4606200 0 0 0 0 0 0 0 0 0 0 0 0 7151 1332 6536 59836;59837 47397 47397 1 DFSLAGNFSR Unmodified 1112.5251 0.52507234 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 72.012 72.147 2 0.0053211 82949 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 69.423 46.932 23612000 0 0 0 0 1443800 0 0 0 1867600 3233100 3441500 4675600 2239600 2186900 4524100 7152 645 6537 59838;59839;59840;59841;59842;59843;59844;59845 47398;47399;47400;47401 47401 4 DFSLILDDVAITELSFSREYTAAVEAK Unmodified 3002.5124 0.51244855 4038 Q99623 PHB2 Prohibitin-2 yes yes 0 0 1 By MS/MS 2 0 1 1 104.7 96.568 3 6.3938E-06 124038 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.106 30.141 2264900 2264900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7153 4038 6538 59846 47402 47402 1 DFSLLYEEAR Unmodified 1241.5928 0.59281755 3990 Q96SI1 KCTD15 BTB/POZ domain-containing protein KCTD15 yes yes 0 0 0 By MS/MS 10 0 1 1 80.282 80.511 2 0.014518 92727 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.305 40.53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7154 3990 6539 59847 47403 47403 1 DFSNSPLHR Unmodified 1071.5098 0.50975662 687 O95758 PTBP3 Polypyrimidine tract-binding protein 3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 32.677 32.756 2 0.048015 35594 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 42.599 27.159 44969000 0 0 0 0 4008100 7159700 5618000 6294000 3370800 0 0 0 12152000 6366300 0 7155 687 6540 59848;59849;59850;59851;59852;59853;59854 47404;47405 47404 2 DFSPEALK Unmodified 905.44945 0.44944778 279 O15372 EIF3H Eukaryotic translation initiation factor 3 subunit H yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 55.663 49.371 2 0.038396 61675 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 71.342 49.572 724300000 28657000 695650000 0 0 0 0 0 0 0 0 0 0 0 0 0 7156 279 6541 59855;59856;59857 47406;47407 47407 2 DFSQISILK Unmodified 1049.5757 0.57571092 3392 Q8NBF6 AVL9 Late secretory pathway protein AVL9 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 79.099 79.155 2 0.012004 91513 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 61.962 37.331 32380000 0 0 0 2586400 0 4815200 2317300 0 0 6455200 0 3902100 3212100 3038900 6053100 7157 3392 6542 59858;59859;59860;59861;59862;59863;59864;59865 47408;47409;47410;47411;47412 47408 5 DFSSDDSK Unmodified 899.35086 0.35085595 2491 Q15057 ACAP2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 yes yes 0 0 0 By MS/MS 1 0 1 1 106.23 111.5 2 0.016419 92139 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 92.187 60.232 21328000 21328000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7158 2491 6543 59866 47413 47413 1 DFSYNYFGFK Unmodified 1286.5608 0.56078914 1171 P23921 RRM1 Ribonucleoside-diphosphate reductase large subunit yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 85.026 85.133 2 0.012749 98392 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.8 48.206 8912500 0 0 0 0 0 2547800 0 0 0 0 0 0 0 1625900 4738700 7159 1171 6544 59867;59868;59869 47414 47414 1 DFTATDLSEFAAK Unmodified 1414.6616 0.6616254 1465 P42765 ACAA2 3-ketoacyl-CoA thiolase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 6.56 3.86 3 1 5 1 2 1 1 1 1 1 1 81.763 79.723 2 2.1966E-23 98065 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 153.12 122.87 463270000 13393000 414960000 2494000 743120 0 0 0 0 0 0 6631900 5466300 0 3103200 16472000 7160 1465 6545 59870;59871;59872;59873;59874;59875;59876;59877;59878 47415;47416;47417;47418;47419;47420 47415 6 DFTPVCTTELGR Unmodified 1394.65 0.65001485 1261 P30041 PRDX6 Peroxiredoxin-6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 66.159 66.222 2 6.0118E-08 75869 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 129.85 108 737670000 0 0 0 27890000 25350000 0 0 0 0 0 139230000 125930000 42252000 106710000 270300000 7161 1261 6546 59879;59880;59881;59882;59883;59884;59885 47421;47422;47423;47424;47425;47426;47427;47428;47429;47430;47431;47432;47433;47434 47425 14 DFTQYIFTEK Unmodified 1290.6132 0.61321864 3870 Q96HR8 NAF1 H/ACA ribonucleoprotein complex non-core subunit NAF1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83.604 83.141 2 4.0684E-06 101682 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 146.69 123.91 351850000 0 85146000 2977700 14187000 14166000 15033000 15877000 21855000 16271000 27499000 26187000 29308000 17731000 19416000 46195000 7162 3870 6547 59886;59887;59888;59889;59890;59891;59892;59893;59894;59895;59896;59897;59898;59899 47435;47436;47437;47438;47439;47440;47441;47442;47443;47444;47445;47446;47447 47437 11 DFTSLENTVEER Unmodified 1438.6576 0.65760265 2135 Q07065 CKAP4 Cytoskeleton-associated protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 72.132 72.158 2 0.0076087 82807 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 58.676 43.047 30200000 0 0 0 0 2759300 7591500 2800600 5857200 4631300 6560500 0 0 0 0 0 7163 2135 6548 59900;59901;59902;59903;59904;59905 47448;47449;47450 47449 3 DFTVASPAEFVTR Unmodified 1438.7092 0.70924429 2231;180 Q13085;O00763 ACACA;ACACB Acetyl-CoA carboxylase 1;Biotin carboxylase;Acetyl-CoA carboxylase 2;Biotin carboxylase no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.522 82.583 2 5.6175E-08 94732 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 101.95 76.568 128410000 0 0 0 3852500 5368000 11856000 6900700 8103300 5513700 12704000 10097000 13794000 10299000 13968000 25952000 7164 2231;180 6549 59906;59907;59908;59909;59910;59911;59912;59913;59914;59915;59916;59917 47451;47452;47453;47454;47455;47456;47457;47458;47459;47460;47461;47462 47458 12 DFTVNTVAGAMK Unmodified 1252.6122 0.61217279 4615 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 72.686 71.911 2 2.1169E-05 88165 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 133.13 89.692 174130000 0 147890000 0 0 1995000 0 2957200 0 2434800 4654800 3887800 4608600 3003100 2692000 0 7165 4615 6550 59918;59919;59920;59921;59922;59923;59924;59925;59926;59927 47463;47464;47465;47466 47464 4 DFTVSALHGDMDQK Unmodified 1562.7035 0.70350699 2396 Q14240 EIF4A2 Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 62.273 62.52 3 0.019441 70719 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 30.905 23.535 29037000 0 0 0 0 0 5038900 2266200 0 0 0 6484300 0 0 3726500 11521000 7166 2396 6551 59928;59929;59930;59931;59932 47467 47467 1 DFTVSAMHGDMDQK 2 Oxidation (M) 1612.6498 0.64975686 1816 P60842 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.79 2.8 2 1 16 3 1 1 2 1 1 2 1 2 1 2 2 28.463 27.98 2;3 2.2325E-19 30509 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 128.01 99.288 318840000 0 29642000 0 5496500 13076000 52870000 0 13030000 18494000 41668000 12010000 47475000 10966000 29998000 44116000 7167 1816 6552 59933;59934;59935;59936;59937;59938;59939;59940;59941;59942;59943;59944;59945;59946;59947;59948;59949;59950;59951 47468;47469;47470;47471;47472;47473;47474;47475;47476;47477;47478;47479;47480;47481;47482;47483;47484 47471 2949;2950 15 DFTVSAMHGDMDQK Oxidation (M) 1596.6548 0.65484224 1816 P60842 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.69 1.54 1 25 1 1 3 2 1 2 2 2 3 3 1 3 2 41.274 41.266 2;3 4.8248E-13 47365 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 108.9 82.389 393380000 0 19050000 0 5716900 20517000 23249000 7232500 20345000 10846000 17826000 71518000 65665000 11217000 50695000 69501000 7168 1816 6552 59952;59953;59954;59955;59956;59957;59958;59959;59960;59961;59962;59963;59964;59965;59966;59967;59968;59969;59970;59971;59972;59973;59974;59975;59976;59977 47485;47486;47487;47488;47489;47490;47491;47492;47493;47494;47495 47495 2949;2950 8 DFTVSAMHGDMDQK Unmodified 1580.6599 0.65992761 1816 P60842 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.96 2.69 3 20 1 2 1 1 2 1 2 1 2 2 2 2 2 2 54.17 53.488 2;3 3.6387E-50 60941 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 201.46 166.74 1083700000 9095000 56649000 0 23347000 18133000 123400000 25563000 49026000 20487000 108430000 133070000 105710000 62652000 72664000 275500000 7169 1816 6552 59978;59979;59980;59981;59982;59983;59984;59985;59986;59987;59988;59989;59990;59991;59992;59993;59994;59995;59996;59997;59998;59999;60000 47496;47497;47498;47499;47500;47501;47502;47503;47504;47505;47506;47507;47508;47509;47510;47511;47512;47513;47514;47515;47516;47517;47518;47519;47520;47521;47522;47523;47524;47525;47526;47527;47528 47518 29 DFVASIDATYAK Unmodified 1299.6347 0.63468237 1183 P25205 MCM3 DNA replication licensing factor MCM3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 77.037 72.427 2 3.296E-05 89337 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 102.06 89.534 300140000 106340000 183810000 9985600 0 0 0 0 0 0 0 0 0 0 0 0 7170 1183 6553 60001;60002;60003;60004;60005 47529;47530;47531;47532;47533;47534;47535;47536;47537 47537 9 DFVDLSTGEDAHK Unmodified 1432.647 0.64703797 541 O75794 CDC123 Cell division cycle protein 123 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.45 3.11 3 1 16 1 2 1 1 1 2 2 1 2 1 1 1 2 1 1 52.725 51.647 2;3 0.00070877 58458 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 72.2 61.049 870540000 64475000 532260000 8541200 12982000 8130000 25400000 14781000 15717000 13214000 19235000 26318000 26705000 31285000 21794000 49702000 7171 541 6554 60006;60007;60008;60009;60010;60011;60012;60013;60014;60015;60016;60017;60018;60019;60020;60021;60022;60023;60024;60025 47538;47539;47540;47541;47542;47543;47544;47545;47546;47547;47548;47549;47550;47551;47552;47553;47554;47555;47556 47545 16 DFVEAPPPK Unmodified 998.5073 0.50729701 2961 Q6PKG0 LARP1 La-related protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 40.691 40.818 2 0.004985 46059 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 85.064 67.028 115400000 0 0 0 9343900 8380700 7830900 8939000 8887400 7783900 10969000 11135000 16812000 14895000 10418000 0 7172 2961 6555 60026;60027;60028;60029;60030;60031;60032;60033;60034;60035;60036 47557;47558;47559;47560;47561;47562;47563;47564;47565;47566;47567;47568 47567 12 DFVEDDTTHG Unmodified 1134.4465 0.44654725 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 30.296 29.706 2 0.0017429 32534 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 88.942 76.797 311500000 18512000 34721000 0 0 14147000 24924000 16585000 16949000 11330000 33472000 26305000 32338000 20339000 20197000 41679000 7173 5071 6556 60037;60038;60039;60040;60041;60042;60043;60044;60045;60046;60047;60048;60049 47569;47570;47571;47572;47573;47574;47575;47576;47577;47578;47579;47580;47581;47582;47583 47580 14 DFVNYLVR Unmodified 1024.5342 0.53418046 2152 Q08211 DHX9 ATP-dependent RNA helicase A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.139 79.198 2 0.0046289 91456 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 113.08 81.794 336510000 0 0 0 25419000 17140000 33474000 17325000 14061000 21670000 34396000 26995000 38384000 28177000 30263000 49201000 7174 2152 6557 60050;60051;60052;60053;60054;60055;60056;60057;60058;60059;60060;60061 47584;47585;47586;47587;47588;47589;47590;47591;47592;47593;47594;47595 47585 12 DFVPFITK Unmodified 965.52222 0.52221879 1602 P49815 TSC2 Tuberin yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 81.759 81.125 2 0.028816 100208 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.282 55.755 104450000 0 40666000 0 2892200 3756600 7191000 5559900 5857100 5374200 6857200 6379000 9696000 0 10217000 0 7175 1602 6558 60062;60063;60064;60065;60066;60067;60068;60069;60070;60071;60072;60073 47596;47597;47598 47596 3 DFVQVMR Oxidation (M) 909.43784 0.43783723 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 38.376 38.54 2 0.034268 42356 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 60.344 7.2465 408520000 0 0 0 33219000 29920000 46143000 43582000 26876000 33658000 29777000 37611000 40282000 0 44996000 42458000 7176 1986 6559 60074;60075;60076;60077;60078;60079;60080;60081;60082;60083;60084 47599 47599 1 DFVSEQLTSLLVNGVQLPALGENK Unmodified 2570.3592 0.35918279 1733 P54136 RARS Arginine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS 2 0 1 1 102.56 97.848 3 3.9477E-19 120922 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.122 85.064 18901000 0 18901000 0 0 0 0 0 0 0 0 0 0 0 0 0 7177 1733 6560 60085 47600 47600 1 DFVTDADAEVLEHSGK Unmodified 1731.7952 0.79515877 1498 P46100 ATRX Transcriptional regulator ATRX yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 76.338 75.299 3 0.00047463 93023 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 63.827 58.398 208100000 13472000 120880000 0 1776700 2750700 9675700 3192500 7475800 5793400 8350900 0 12577000 0 10026000 12128000 7178 1498 6561 60086;60087;60088;60089;60090;60091;60092;60093;60094;60095;60096;60097 47601;47602;47603;47604;47605;47606 47602 3 DFVTEALQSR Unmodified 1164.5775 0.57750184 2500 Q15126 PMVK Phosphomevalonate kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.792 75.855 2 0.041377 87755 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 39.622 35.876 249880000 0 0 0 10013000 8918100 28741000 20639000 19171000 8556600 30865000 27849000 23611000 21316000 14445000 35749000 7179 2500 6562 60098;60099;60100;60101;60102;60103;60104;60105;60106;60107;60108;60109 47607 47607 1 DFWELASLDCYNHLAEWK Unmodified 2296.0259 0.02590376 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS 2 0 1 1 98.407 90.277 3 4.3843E-55 116474 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 148.56 136.43 55294000 55294000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7180 1986 6563 60110 47608 47608 1 DFYELEPEK Unmodified 1168.5288 0.52882031 939 P11216 PYGB Glycogen phosphorylase, brain form yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 67.33 60.224 2 0.024253 77307 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.501 62.108 76986000 5795100 71191000 0 0 0 0 0 0 0 0 0 0 0 0 0 7181 939 6564 60111;60112 47609;47610 47609 2 DFYLSIADHYVEVLECK Unmodified 2099.9874 0.98739299 536 O75718 CRTAP Cartilage-associated protein yes yes 0 0 0 By MS/MS 3 0 1 1 97.759 94.247 3 0.0018453 97731 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 51.265 35.126 1987600 1987600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7182 536 6565 60113 47611 47611 1 DFYVAFQDLPTR Unmodified 1470.7143 0.71432967 2415 Q14566 MCM6 DNA replication licensing factor MCM6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 86.854 86.994 2 8.2966E-06 100821 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 109.42 90.674 58809000 0 0 0 0 0 6446000 2433500 2951600 2911500 5888400 6210700 5621200 2017300 4579200 19749000 7183 2415 6566 60114;60115;60116;60117;60118;60119;60120;60121;60122;60123 47612;47613;47614;47615;47616;47617;47618;47619;47620;47621;47622;47623;47624;47625 47613 14 DGAATGVDAICIHHLDPK Unmodified 1888.9101 0.91014572 3593 Q8WXI7 MUC16 Mucin-16 yes yes 0 0 0 By MS/MS 3 0 1 1 8.2667 4.9082 4 0.047147 6717 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 24.041 14.383 1611300 0 1611300 0 0 0 0 0 0 0 0 0 0 0 0 0 7184 3593 6567 60124 47626 47626 0 DGAATGVDAICTHRLDPK Unmodified 1895.916 0.91595938 3593 Q8WXI7 MUC16 Mucin-16 yes no 0 0 1 By MS/MS 2 0 1 1 53.948 50.051 3 6.7585E-14 62749 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 98.572 92.331 35479000 0 0 35479000 0 0 0 0 0 0 0 0 0 0 0 0 7185 3593 6568 60125 47627;47628 47628 2 DGAGDVAFIR Unmodified 1019.5036 0.50360861 764 P02788 LTF Lactotransferrin;Lactoferricin-H;Kaliocin-1;Lactoferroxin-A;Lactoferroxin-B;Lactoferroxin-C yes yes 0 0 0 By MS/MS By MS/MS 10 0 3 2 1 57.458 57.633 2 0.0066812 65657 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 93.267 75.709 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7186 764 6569 60126;60127;60128 47629;47630;47631 47629 3 DGAGDVAFVK Unmodified 977.48181 0.48181054 763 P02787 TF Serotransferrin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 45.762 45.682 2 0.005999 51279 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 66.692 40.753 75765000 0 0 0 21149000 0 0 0 47637000 0 6979400 0 0 0 0 0 7187 763 6570 60129;60130;60131 47632;47633;47634 47632 2 DGAGNSFDLSSLSR Unmodified 1424.6532 0.65318598 954 P11717 IGF2R Cation-independent mannose-6-phosphate receptor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 71.938 72.065 2 0.00065586 83281 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 79.82 68.656 39286000 0 0 0 0 3061800 3943100 3002000 2646400 2785100 3078700 5059300 5230200 3623500 2674000 4181600 7188 954 6571 60132;60133;60134;60135;60136;60137;60138;60139;60140;60141;60142 47635;47636;47637;47638;47639;47640;47641;47642;47643;47644 47642 10 DGALLTTGNK Unmodified 988.51892 0.51892433 2807 Q5VST9 OBSCN Obscurin yes yes 0 0 0 By MS/MS 2 0 1 1 30.84 26.388 2 0.024524 34627 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.568 31.057 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7189 2807 6572 60143 47645 47645 1 DGALTQLNVAFSR Unmodified 1390.7205 0.72047768 1039 P16435 POR NADPH--cytochrome P450 reductase yes yes 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 80.255 80.343 2 2.5227E-08 93016 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 107.83 93.157 46739000 0 0 0 0 3982500 5505900 3193100 3122400 3781200 9211100 6367100 8568400 3007300 0 0 7190 1039 6573 60144;60145;60146;60147;60148;60149;60150;60151;60152;60153 47646;47647;47648 47646 3 DGANIVIAAK Unmodified 970.54475 0.54474515 2997 Q6YN16 HSDL2 Hydroxysteroid dehydrogenase-like protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 48.403 42.755 2 0.0036324 55822 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.467 60.684 65899000 0 65899000 0 0 0 0 0 0 0 0 0 0 0 0 0 7191 2997 6574 60154 47649 47649 1 DGAPGEPPLPGAEPPLAHPGTDK Unmodified 2219.0859 0.08586148 2750 Q5PRF9 SAMD4B Protein Smaug homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 70.049 69.461 3 1.1241E-05 79304 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 39.086 35.895 276390000 0 120740000 0 9603500 7140200 12652000 10759000 9898600 8304000 12130000 16341000 20876000 12954000 12361000 22633000 7192 2750 6575 60155;60156;60157;60158;60159;60160;60161;60162;60163;60164;60165;60166;60167;60168 47650;47651;47652;47653;47654;47655;47656;47657;47658;47659;47660;47661;47662;47663;47664;47665;47666 47655 17 DGARPDVTESESGSPEYR Unmodified 1950.8555 0.85552719 803 P05187;P10696 ALPP;ALPPL2 Alkaline phosphatase, placental type;Alkaline phosphatase, placental-like yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 33.49 33.776 3 1.6099E-05 36562 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 69.935 59.32 45379000 0 0 0 0 3250300 3720200 0 0 0 6049500 7758500 11184000 5257900 3912200 4246700 7193 803 6576 60169;60170;60171;60172;60173;60174;60175;60176 47667;47668;47669;47670;47671;47672;47673;47674;47675 47674 9 DGASCAELVSFK Unmodified 1282.5864 0.58635197 2743 Q5JVF3 PCID2 PCI domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.634 63.796 2 0.0012985 73052 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 73.499 60.972 55642000 0 0 0 0 2535500 5295200 2989600 2163400 2289400 3647100 8051500 8011200 5010500 6560700 9088200 7194 2743 6577 60177;60178;60179;60180;60181;60182;60183;60184;60185;60186;60187;60188 47676;47677;47678;47679;47680;47681;47682;47683;47684;47685 47676 10 DGATILTHAYSR Unmodified 1303.6521 0.65206377 2395 Q14232 EIF2B1 Translation initiation factor eIF-2B subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 48.763 48.863 3 0.046337 55174 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 30.023 22.893 105650000 0 0 0 6564800 6470200 17880000 6807300 8367600 0 10805000 14266000 0 7484300 7542300 19467000 7195 2395 6578 60189;60190;60191;60192;60193;60194;60195;60196;60197;60198 47686 47686 1 DGAVNGPSVVGDQTPIEPQTSIER Unmodified 2465.2034 0.20341043 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 73.529 73.584 3 2.0053E-73 84354 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 127.96 122.51 254460000 0 0 0 11404000 15946000 15388000 12653000 0 13549000 16552000 40237000 36765000 18266000 19774000 53922000 7196 1564 6579 60199;60200;60201;60202;60203;60204;60205;60206;60207;60208;60209 47687;47688;47689;47690;47691;47692;47693;47694;47695;47696;47697;47698;47699;47700;47701;47702;47703;47704;47705;47706 47696 20 DGAVNGPSVVGDQTPIEPQTSIERLTETK Unmodified 3037.5204 0.52038748 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 84.691 80.04 3 1.3141E-163 100348 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 178.69 167.48 717280000 48833000 626030000 42417000 0 0 0 0 0 0 0 0 0 0 0 0 7197 1564 6580 60210;60211;60212;60213 47707;47708;47709;47710;47711;47712 47708 6 DGAWGAFR Unmodified 878.4035 0.40350064 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.74 55.868 2 0.012535 62733 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 74.415 40.865 299250000 0 0 0 11447000 8969200 31156000 14689000 20108000 6411400 29603000 28771000 32357000 20279000 27525000 67935000 7198 1565 6581 60214;60215;60216;60217;60218;60219;60220;60221;60222;60223;60224;60225 47713;47714;47715;47716;47717;47718 47717 4 DGDDVIIIGVFK Unmodified 1289.6867 0.68671794 982 P13667 PDIA4 Protein disulfide-isomerase A4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 3.27 2.67 10 3 2 6 3 4 1 1 94.152 89.759 2 4.5768E-15 92363 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 147.2 127.93 260820000 162310000 84401000 11715000 0 0 0 0 0 0 0 909930 0 0 0 1481100 7199 982 6582 60226;60227;60228;60229;60230;60231;60232;60233;60234;60235;60236;60237;60238;60239;60240 47719;47720;47721;47722;47723;47724;47725;47726;47727;47728;47729;47730;47731;47732;47733;47734;47735;47736;47737;47738;47739;47740;47741;47742;47743;47744;47745;47746 47724 26 DGDEFNNSIR Unmodified 1165.5 0.4999798 4433 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 34.458 34.639 2 0.0033866 38190 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 76.679 68.739 22074000 0 0 0 0 1782200 0 2695800 3149500 2219800 0 0 0 3133100 3445100 5648700 7200 4433 6583 60241;60242;60243;60244;60245;60246;60247;60248 47747;47748;47749;47750;47751 47750 5 DGDESSPILTSFELVK Unmodified 1735.8516 0.85161101 3422 Q8NEB9 PIK3C3 Phosphatidylinositol 3-kinase catalytic subunit type 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 91.798 90.685 2 0.0032526 106069 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 45.257 35.57 134010000 16840000 95822000 1228000 0 1214900 1984000 0 1540600 2022600 2476300 1218800 2479600 1279400 1997800 3904600 7201 3422 6584 60249;60250;60251;60252;60253;60254;60255;60256;60257;60258;60259;60260;60261 47752;47753;47754;47755;47756;47757;47758;47759 47759 8 DGDFCIR Unmodified 881.37015 0.3701516 1057 P17655 CAPN2 Calpain-2 catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.967 40.147 2 0.025588 43258 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.462 69.348 293110000 0 0 0 17158000 13449000 27460000 19770000 17020000 14511000 33627000 35062000 31347000 22076000 24225000 37400000 7202 1057 6585 60262;60263;60264;60265;60266;60267;60268;60269;60270;60271;60272;60273 47760;47761 47760 2 DGDFCIRVFSEK Unmodified 1471.6766 0.67656396 1057 P17655 CAPN2 Calpain-2 catalytic subunit yes yes 0 0 1 By MS/MS 2 0 1 1 80.698 72.567 3 0.0031353 95121 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.199 46.834 45226000 45226000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7203 1057 6586 60274 47762 47762 1 DGDFENPVPYTGAVK Unmodified 1607.7468 0.74675201 1260 P30040 ERP29 Endoplasmic reticulum resident protein 29 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 69.579 69.638 2 7.3784E-27 79559 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 130.44 123.41 226930000 0 0 0 11351000 9055600 13515000 12975000 10970000 8996800 19417000 31765000 32704000 0 0 76184000 7204 1260 6587 60275;60276;60277;60278;60279;60280;60281;60282;60283;60284 47763;47764;47765;47766;47767;47768;47769;47770;47771;47772 47767 7 DGDFLVR Unmodified 820.40792 0.40791731 543 O75815;Q92529;Q6S5L8 BCAR3;SHC3;SHC4 Breast cancer anti-estrogen resistance protein 3;SHC-transforming protein 3;SHC-transforming protein 4 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 47.729 47.994 2 0.044016 54129 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 66.993 37.152 18373000 0 0 0 0 0 0 0 0 2232000 4169600 4677400 0 3879000 3414900 0 7205 543 6588 60285;60286;60287;60288;60289 47773 47773 1 DGDGCITTR Unmodified 993.41856 0.41855836 1218 P27482 CALML3 Calmodulin-like protein 3 yes yes 0 0 0 By MS/MS 10 0 1 1 13.002 12.866 2 0.0032704 12044 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 99.136 86.147 11434000 0 0 0 11434000 0 0 0 0 0 0 0 0 0 0 0 7206 1218 6589 60290 47774;47775 47774 2 DGDGEGAGGAPEEMPVDR Unmodified 1757.7163 0.71625652 1237 P28702 RXRB Retinoic acid receptor RXR-beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 43.382 43.502 2 2.526E-53 49319 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 158.58 152.34 77293000 0 0 0 5342200 5237600 10973000 5211100 6693100 0 6580200 7369900 0 6472600 7704500 15709000 7207 1237 6590 60291;60292;60293;60294;60295;60296;60297;60298;60299;60300;60301 47776;47777;47778;47779;47780;47781;47782;47783;47784;47785;47786 47785 11 DGDGEGAGGAPEEMPVDR Oxidation (M) 1773.7112 0.71117114 1237 P28702 RXRB Retinoic acid receptor RXR-beta yes yes 0 1 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 27.276 27.408 2 0.00040357 29500 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 51.875 45.342 31059000 0 0 0 2875200 2671100 4722200 0 2798600 0 4827300 0 6351400 4147300 2665400 0 7208 1237 6590 60302;60303;60304;60305;60306;60307;60308;60309 47787;47788;47789;47790 47787 1832 4 DGDGTITTK Unmodified 906.42944 0.42944062 912 P0DP25;P0DP24;P0DP23 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 4.46 3.73 2 5 2 4 5 3 1 1 1 1 1 23.719 22.802 2 0.00048382 92009 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 127.46 103.94 1173200000 658720000 468670000 20491000 0 0 941350 0 0 3641400 0 8125500 0 0 0 12571000 7209 912 6591 60310;60311;60312;60313;60314;60315;60316;60317;60318;60319;60320;60321;60322 47791;47792;47793;47794;47795;47796;47797;47798;47799;47800;47801 47798 8 DGDLGLGPISDSK Unmodified 1272.6198 0.61976058 1983 P78415 IRX3 Iroquois-class homeodomain protein IRX-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 62.739 62.824 2 0.00053292 72590 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 94.616 68.678 111580000 0 0 0 12077000 8366200 10415000 0 6701800 0 11779000 10313000 14977000 13514000 9474300 13962000 7210 1983 6592 60323;60324;60325;60326;60327;60328;60329;60330;60331;60332;60333 47802;47803;47804;47805;47806;47807;47808;47809;47810;47811;47812;47813 47812 8 DGDLIATK Unmodified 831.4338 0.43379771 376 O43852 CALU Calumenin yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 26.561 26.8 2 0.0089419 27395 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 84.498 43.271 234160000 0 0 0 0 15660000 0 16537000 19387000 10914000 21481000 0 41833000 17016000 34661000 56672000 7211 376 6593 60334;60335;60336;60337;60338;60339;60340;60341;60342;60343 47814;47815;47816 47815 3 DGDMHSSSLTVECSK Oxidation (M) 1667.6767 0.67669989 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 1 0 By MS/MS 2 0 1 1 24.845 20.717 3 0.00091765 27283 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 59.673 54.782 51721000 0 51721000 0 0 0 0 0 0 0 0 0 0 0 0 0 7212 2203 6594 60344 47817 47817 3578 1 DGDMHSSSLTVECSK Unmodified 1651.6818 0.68178527 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 33.651 29.051 2;3 0.0002677 38014 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.82 103.6 70041000 0 70041000 0 0 0 0 0 0 0 0 0 0 0 0 0 7213 2203 6594 60345;60346;60347 47818;47819 47819 1 DGDSVMVLPTIPEEEAK Oxidation (M) 1844.8714 0.87136018 1261 P30041 PRDX6 Peroxiredoxin-6 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.87 3.98 2 7 3 11 8 4 1 1 1 1 1 1 1 1 1 1 1 80.092 78.538 2;3 6.5882E-80 95394 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 188.29 182.97 4394800000 812740000 2932100000 0 18228000 16703000 25532000 24480000 15799000 16848000 0 102320000 102620000 20024000 80742000 226600000 7214 1261 6595 60348;60349;60350;60351;60352;60353;60354;60355;60356;60357;60358;60359;60360;60361;60362;60363;60364;60365;60366;60367;60368;60369;60370 47820;47821;47822;47823;47824;47825;47826;47827;47828;47829;47830;47831;47832;47833;47834;47835;47836;47837;47838;47839;47840;47841 47832 1859 20 DGDSVMVLPTIPEEEAK Unmodified 1828.8764 0.87644556 1261 P30041 PRDX6 Peroxiredoxin-6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.44 4.02 2 12 1 19 6 8 1 1 1 1 2 2 1 2 2 2 1 2 2 85.437 83.976 2;3 8.0213E-73 91935 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 179.35 129 5056500000 893400000 3346600000 7053700 6861400 10110000 18286000 19180000 23937000 11649000 42217000 141290000 83015000 14152000 94143000 344570000 7215 1261 6595 60371;60372;60373;60374;60375;60376;60377;60378;60379;60380;60381;60382;60383;60384;60385;60386;60387;60388;60389;60390;60391;60392;60393;60394;60395;60396;60397;60398;60399;60400;60401;60402;60403;60404 47842;47843;47844;47845;47846;47847;47848;47849;47850;47851;47852;47853;47854;47855;47856;47857;47858;47859;47860;47861;47862;47863;47864;47865;47866;47867;47868;47869;47870;47871 47856 28 DGDSVMVLPTIPEEEAKK Unmodified 1956.9714 0.97140857 1261 P30041 PRDX6 Peroxiredoxin-6 yes yes 0 0 1 By MS/MS 2.5 0.5 2 2 4 81.954 77.952 2;3 3.2058E-27 93327 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 102.36 97.834 510350000 0 510350000 0 0 0 0 0 0 0 0 0 0 0 0 0 7216 1261 6596 60405;60406;60407;60408 47872;47873;47874;47875 47874 3 DGDSVMVLPTIPEEEAKK Oxidation (M) 1972.9663 0.9663232 1261 P30041 PRDX6 Peroxiredoxin-6 yes yes 0 1 1 By MS/MS 3 0 2 2 74.418 70.746 2;3 8.9884E-59 85514 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 153.72 144.32 101450000 0 101450000 0 0 0 0 0 0 0 0 0 0 0 0 0 7217 1261 6596 60409;60410 47876;47877 47877 1859 2 DGDSYDPYDFSDTEEEMPQVHTPK Unmodified 2801.1287 0.12865009 1183 P25205 MCM3 DNA replication licensing factor MCM3 yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 79.93 74.179 3 4.0536E-12 90936 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 78.976 77.559 19658000 9127800 10530000 0 0 0 0 0 0 0 0 0 0 0 0 0 7218 1183 6597 60411;60412 47878;47879 47878 2 DGDTLNQHGIK Unmodified 1196.5786 0.57856447 4609 Q9NRR5 UBQLN4 Ubiquilin-4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.41 3.11 4 2 23 1 4 1 2 2 2 2 2 1 2 2 2 2 2 2 21.109 20.443 2;3 1.2216E-15 20864 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 154.75 135.65 1370100000 33414000 465530000 7662400 50671000 43772000 51027000 55342000 65530000 21173000 68720000 89931000 119650000 97179000 72834000 127640000 7219 4609 6598 60413;60414;60415;60416;60417;60418;60419;60420;60421;60422;60423;60424;60425;60426;60427;60428;60429;60430;60431;60432;60433;60434;60435;60436;60437;60438;60439;60440;60441 47880;47881;47882;47883;47884;47885;47886;47887;47888;47889;47890;47891;47892;47893;47894;47895;47896;47897;47898;47899;47900;47901;47902;47903;47904;47905;47906;47907;47908;47909 47906 22 DGDTQTDAGGEPDSLGQQPTDTPYEWDLDK Unmodified 3250.3698 0.36981965 360 O43719 HTATSF1 HIV Tat-specific factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 80.068 80.124 3 9.7592E-20 92746 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 55.428 53.787 95004000 0 0 0 2960800 4609700 6871600 2752000 4627900 4980400 0 10354000 16556000 9017200 12510000 19765000 7220 360 6599 60442;60443;60444;60445;60446;60447;60448;60449;60450;60451;60452 47910;47911;47912;47913;47914;47915 47912 6 DGDVTVTNDGATILSMMDVDHQIAK 2 Oxidation (M) 2677.2211 0.22111069 1548 P48643 CCT5 T-complex protein 1 subunit epsilon yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 75.17 73.739 2;3 2.23E-125 90869 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 162.29 149.45 934700000 41640000 527130000 0 9761000 14523000 32995000 12316000 16286000 18260000 49946000 52948000 41572000 22722000 32161000 62442000 7221 1548 6600 60453;60454;60455;60456;60457;60458;60459;60460;60461;60462;60463;60464;60465;60466;60467;60468;60469 47916;47917;47918;47919;47920;47921;47922;47923;47924;47925;47926;47927;47928;47929;47930;47931;47932;47933;47934;47935;47936;47937;47938 47922 2460;2461 23 DGDVTVTNDGATILSMMDVDHQIAK Oxidation (M) 2661.2262 0.22619606 1548 P48643 CCT5 T-complex protein 1 subunit epsilon yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 3.81 3.03 11 6 4 3 12 2 1 1 1 1 86.178 82.647 2;3 5.83E-134 103228 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 168.75 165.13 2391200000 171540000 2139400000 37790000 0 0 0 0 0 0 9904100 0 7580300 2839700 0 22149000 7222 1548 6600 60470;60471;60472;60473;60474;60475;60476;60477;60478;60479;60480;60481;60482;60483;60484;60485;60486;60487;60488;60489;60490 47939;47940;47941;47942;47943;47944;47945;47946;47947;47948;47949;47950;47951;47952;47953;47954;47955;47956;47957;47958;47959;47960;47961 47944 2460;2461 22 DGDVTVTNDGATILSMMDVDHQIAK Unmodified 2645.2313 0.23128144 1548 P48643 CCT5 T-complex protein 1 subunit epsilon yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 2.79 2.04 10 3 1 4 6 3 1 93.846 89.482 2;3;4 1.5761E-151 109700 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 191.5 187.98 1918100000 528090000 1323900000 62016000 0 0 0 0 0 0 0 0 0 0 0 4131400 7223 1548 6600 60491;60492;60493;60494;60495;60496;60497;60498;60499;60500;60501;60502;60503;60504 47962;47963;47964;47965;47966;47967;47968;47969;47970;47971;47972;47973;47974;47975;47976;47977;47978;47979 47977 17 DGDVVILR Unmodified 885.49198 0.4919813 2796 Q5TDH0 DDI2 Protein DDI1 homolog 2 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 51.933 52.035 2 0.025168 59063 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 58.917 32.808 28202000 0 0 0 0 3591600 7463600 0 7441100 0 0 0 9705700 0 0 0 7224 2796 6601 60505;60506;60507;60508 47980;47981 47980 2 DGEAVWFGCDVGK Unmodified 1438.6187 0.61871473 2348 Q13867 BLMH Bleomycin hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.24 2 1 10 1 2 1 1 1 1 1 1 1 1 1 1 76.723 75.499 2 4.7087E-05 88002 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 88.596 84.297 183130000 4452300 85100000 0 52657000 2959800 3444400 2223400 0 0 3448800 5520000 6768600 4874500 3662300 8020800 7225 2348 6602 60509;60510;60511;60512;60513;60514;60515;60516;60517;60518;60519;60520;60521 47982;47983;47984;47985;47986;47987;47988;47989;47990;47991 47990 9 DGEDLMDESVLK Unmodified 1349.6021 0.60206161 2328 Q13616 CUL1 Cullin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 75.28 68.637 2 0.00058695 89161 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 112.36 90.271 107710000 24875000 82836000 0 0 0 0 0 0 0 0 0 0 0 0 0 7226 2328 6603 60522;60523;60524;60525;60526;60527 47992;47993;47994;47995;47996;47997 47995 6 DGEDLMDESVLK Oxidation (M) 1365.597 0.59697623 2328 Q13616 CUL1 Cullin-1 yes yes 0 1 0 By MS/MS By MS/MS 2 0 3 2 1 56.139 48.758 2 0.0010394 63624 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.681 66.595 49580000 16738000 32842000 0 0 0 0 0 0 0 0 0 0 0 0 0 7227 2328 6603 60528;60529;60530 47998;47999;48000 47998 3791 3 DGEDQTQDTELVETRPAGDGTFQK Unmodified 2636.1838 0.1837972 754;1281 P01891;P10316;P01892;P30512;P30459;P16190;P16189;Q09160;Q29963;Q07000;P30508;P30501;P10321;Q31612;P30505;Q29960;Q95604 HLA-A;HLA-C;HLA-B HLA class I histocompatibility antigen, A-68 alpha chain;HLA class I histocompatibility antigen, A-69 alpha chain;HLA class I histocompatibility antigen, A-2 alpha chain;HLA class I histocompatibility antigen, A-29 alpha chain;HLA class I histocompatibility antigen, A-74 alpha chain;HLA class I histocompatibility antigen, A-33 alpha chain;HLA class I histocompatibility antigen, A-31 alpha chain;HLA class I histocompatibility antigen, A-80 alpha chain;HLA class I histocompatibility antigen, Cw-6 alpha chain;HLA class I histocompatibility antigen, Cw-15 alpha chain;HLA class I histocompatibility antigen, Cw-12 alpha chain;HLA class I histocompatibility antigen, Cw-2 alpha chain;HLA class I histocompatibility antigen, Cw-7 alpha chain;HLA class I histocompatibility antigen, B-73 alpha chain;HLA class I histocompatibility antigen, Cw-8 alpha chain;HLA class I histocompatibility antigen, Cw-16 alpha chain;HLA class I histocompatibility antigen, Cw-17 alpha chain no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.894 56.02 3 5.7133E-77 63474 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 134.66 131.78 349990000 0 0 0 29907000 18746000 25182000 22527000 20916000 18117000 34854000 33027000 45407000 35113000 24401000 41788000 7228 754;1281 6604 60531;60532;60533;60534;60535;60536;60537;60538;60539;60540;60541;60542 48001;48002;48003;48004;48005;48006;48007;48008;48009;48010;48011;48012 48006 12 DGEDQTQDTELVETRPAGDR Unmodified 2230.9938 0.99381159 753 P01889;P30460;P30480;Q04826;P30491;Q29940;Q29718;P30685;P30498;P30493;P30495;P30490;P30462;P18465;P18464;P18463;P10319;P03989;P30487;P30486;Q31610;P30461;P30483;P30485;P30488 HLA-B HLA class I histocompatibility antigen, B-7 alpha chain;HLA class I histocompatibility antigen, B-8 alpha chain;HLA class I histocompatibility antigen, B-42 alpha chain;HLA class I histocompatibility antigen, B-40 alpha chain;HLA class I histocompatibility antigen, B-53 alpha chain;HLA class I histocompatibility antigen, B-59 alpha chain;HLA class I histocompatibility antigen, B-82 alpha chain;HLA class I histocompatibility antigen, B-35 alpha chain;HLA class I histocompatibility antigen, B-78 alpha chain;HLA class I histocompatibility antigen, B-55 alpha chain;HLA class I histocompatibility antigen, B-56 alpha chain;HLA class I histocompatibility antigen, B-52 alpha chain;HLA class I histocompatibility antigen, B-14 alpha chain;HLA class I histocompatibility antigen, B-57 alpha chain;HLA class I histocompatibility antigen, B-51 alpha chain;HLA class I histocompatibility antigen, B-37 alpha chain;HLA class I histocompatibility antigen, B-58 alpha chain;HLA class I histocompatibility antigen, B-27 alpha chain;HLA class I histocompatibility antigen, B-49 alpha chain;HLA class I histocompatibility antigen, B-48 alpha chain;HLA class I histocompatibility antigen, B-81 alpha chain;HLA class I histocompatibility antigen, B-13 alpha chain;HLA class I histocompatibility antigen, B-45 alpha chain;HLA class I histocompatibility antigen, B-47 alpha chain;HLA class I histocompatibility antigen, B-50 alpha chain no no 0 0 1 By MS/MS By MS/MS By matching By matching 10 0 4 1 1 1 1 42.104 42.077 3 1.5944E-05 47552 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 59.872 44.618 15905000 0 0 0 3961900 2384000 0 0 0 0 4686600 0 4872500 0 0 0 7229 753 6605 60543;60544;60545;60546 48013;48014 48013 2 DGEEAGAYDGPR Unmodified 1235.5055 0.50545911 1270 P30101 PDIA3 Protein disulfide-isomerase A3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 24.388 24.929 2 0.0033909 25078 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 60.518 43.133 19989000 0 0 0 0 0 0 0 0 0 0 3476300 4000900 0 2084100 10428000 7230 1270 6606 60547;60548;60549;60550 48015;48016;48017 48017 3 DGEEEIVYAVDFNHK Unmodified 1763.8002 0.80024414 4818 Q9P2I0 CPSF2 Cleavage and polyadenylation specificity factor subunit 2 yes yes 0 0 0 By MS/MS 2 0 1 1 81.363 73.232 3 2.0102E-10 96046 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 92.75 88.909 21158000 21158000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7231 4818 6607 60551 48018;48019 48019 2 DGEEVVESPALLLQK Unmodified 1625.8512 0.85121708 462 O75147 OBSL1 Obscurin-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 83.542 82.312 2 0.0013533 95502 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 53.569 41.703 31125000 0 19134000 0 2038900 0 0 2983900 0 0 0 0 0 6968500 0 0 7232 462 6608 60552;60553;60554;60555 48020;48021;48022 48020 3 DGEIVGLSGR Unmodified 1001.5142 0.5141733 1243 P29144 TPP2 Tripeptidyl-peptidase 2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 48.777 43.508 2 0.020692 56375 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.136 60.999 79753000 0 79753000 0 0 0 0 0 0 0 0 0 0 0 0 0 7233 1243 6609 60556;60557 48023 48023 0 DGELLFVHSAEGSEFWSALLEK Unmodified 2463.1958 0.19580586 1057 P17655 CAPN2 Calpain-2 catalytic subunit yes yes 0 0 0 By MS/MS 2 0 2 2 100.06 91.929 2;3 0 118119 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 281.99 262.72 41681000 41681000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7234 1057 6610 60558;60559 48024;48025 48024 2 DGEPEPMQK Unmodified 1029.4437 0.44371047 2514 Q15291 RBBP5 Retinoblastoma-binding protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 16.488 16.686 2 0.0095432 15143 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 66.429 56.913 32193000 0 0 0 2215600 1808000 0 2311500 1718100 1155200 2832200 3385200 3961000 3068600 3805100 5932900 7235 2514 6611 60560;60561;60562;60563;60564;60565;60566;60567;60568;60569;60570 48026;48027;48028;48029;48030;48031 48030 6 DGEQHEDLNEVAK Unmodified 1482.6587 0.65866529 697 O95831 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 27.995 23.7 3 0.0091811 31099 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 31.095 18.81 34231000 0 34231000 0 0 0 0 0 0 0 0 0 0 0 0 0 7236 697 6612 60571;60572 48032 48032 1 DGEQPQILLEDSSAGEDSVHDR Unmodified 2396.0728 0.07279019 3903 Q96K76 USP47 Ubiquitin carboxyl-terminal hydrolase 47 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 67.281 67.362 3 5.6966E-16 76637 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.88 61.183 23931000 0 0 0 1942100 0 0 0 0 0 4178400 3839600 0 2873100 0 11098000 7237 3903 6613 60573;60574;60575;60576;60577 48033;48034;48035;48036 48035 3 DGERIITQGEK Unmodified 1244.6361 0.63607935 990 P13861 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 25.958 21.786 3 0.0035647 27169 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 79.23 55.554 94524000 10179000 79681000 4664000 0 0 0 0 0 0 0 0 0 0 0 0 7238 990 6614 60578;60579;60580;60581 48037;48038;48039 48038 0 DGESLSYSMLPLSDGPEGSSSRPQMIR 2 Oxidation (M) 2927.3277 0.32770102 3283 Q8IYH5 ZZZ3 ZZ-type zinc finger-containing protein 3 yes yes 0 2 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 74.905 75.011 3 9.5746E-08 86478 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 41.423 38.154 19064000 0 0 0 0 0 4499900 0 0 0 5983300 0 8581000 0 0 0 7239 3283 6615 60582;60583;60584 48040;48041 48040 4886;4887 2 DGETLEELMK Unmodified 1163.538 0.53800479 986 P13797 PLS3 Plastin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 73.771 73.813 2 0.00028116 85126 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 130.56 114.27 129100000 0 0 0 7832800 6457700 0 0 7786200 0 14410000 15858000 23288000 10229000 0 43240000 7240 986 6616 60585;60586;60587;60588;60589;60590;60591;60592;60593;60594;60595 48042;48043;48044;48045;48046;48047;48048 48042 7 DGETLEELMK Oxidation (M) 1179.5329 0.53291941 986 P13797 PLS3 Plastin-3 yes yes 0 1 0 By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 2 2 1 1 2 2 2 2 2 47.155 47.45 2 0.01436 52114 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.457 37.594 79690000 0 0 0 0 1248100 10075000 6211900 0 1148500 4828800 13327000 11149000 5548600 7353600 18800000 7241 986 6616 60596;60597;60598;60599;60600;60601;60602;60603;60604;60605;60606;60607;60608;60609;60610;60611;60612 48049;48050;48051;48052 48049 1332 3 DGETLEGSDAEESLDK Unmodified 1693.7166 0.71663367 4814 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 45.445 45.633 2 0.0035776 51384 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 58.674 50.161 10688000 0 0 0 0 1669200 0 0 0 0 0 0 0 4896900 0 4121900 7242 4814 6617 60613;60614;60615 48053;48054 48054 2 DGETSGSQEDQLCTALVNQLNK Unmodified 2406.0969 0.096896451 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching 10 0 4 1 1 1 1 82.076 82.069 3 0.010135 94962 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 14.326 12.171 15959000 0 0 0 0 2180500 3703200 0 0 0 4763600 0 0 0 5311200 0 7243 2775 6618 60616;60617;60618;60619 48055 48055 1 DGEVPPEEFSTFIK Unmodified 1593.7563 0.75625407 3744 Q96AY3 FKBP10 Peptidyl-prolyl cis-trans isomerase FKBP10 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 84.672 84.097 2 0.00082062 103429 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.465 82.734 593720000 0 487460000 0 2853400 4564800 11571000 9282500 6357600 0 13238000 10799000 11588000 6092400 9476300 20434000 7244 3744 6619 60620;60621;60622;60623;60624;60625;60626;60627;60628;60629;60630;60631;60632 48056;48057;48058;48059;48060;48061;48062;48063;48064;48065 48060 9 DGEYEELLNSSSISSLLDAQGFSDLEK Unmodified 2945.3666 0.36657217 3180 Q86W92 PPFIBP1 Liprin-beta-1 yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 98.925 95.574 3 3.8189E-32 117778 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.865 67.216 3629100 0 3629100 0 0 0 0 0 0 0 0 0 0 0 0 0 7245 3180 6620 60633;60634 48066;48067 48067 2 DGFFGNPLAPNPADK Unmodified 1558.7416 0.74160705 933 P11047 LAMC1 Laminin subunit gamma-1 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS 7.5 3.55 1 1 4 2 1 1 1 1 82.673 81.444 2 0.016626 100053 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 56.414 45.606 102770000 0 90164000 0 0 0 0 1387200 0 0 2253600 4183000 4783800 0 0 0 7246 933 6621 60635;60636;60637;60638;60639;60640 48068;48069 48068 2 DGFGGLAAAR Unmodified 933.46683 0.46682918 3873 Q96I24 FUBP3 Far upstream element-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 50.121 50.165 2 0.02237 57347 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 46.129 18.961 110280000 0 0 0 10818000 9218200 0 14421000 0 0 22760000 0 0 21629000 19420000 12014000 7247 3873 6622 60641;60642;60643;60644;60645;60646;60647 48070;48071 48071 1 DGFIDLMELK Unmodified 1179.5846 0.58456105 3770 Q96C19;Q9BUP0 EFHD2;EFHD1 EF-hand domain-containing protein D2;EF-hand domain-containing protein D1 yes no 0 0 0 By MS/MS 10 0 1 1 92.175 92.313 2 0.020328 106913 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.258 41.589 4331100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4331100 7248 3770 6623 60648 48072 48072 1 DGFPSGTPALNAK Unmodified 1273.6303 0.63026569 2248 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 58.529 57.774 2 0.0010276 66056 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 66.19 49.987 518910000 0 284960000 0 14972000 13963000 27277000 19642000 10951000 11227000 30074000 23355000 0 20552000 22969000 38966000 7249 2248 6624 60649;60650;60651;60652;60653;60654;60655;60656;60657;60658;60659;60660;60661 48073;48074;48075;48076;48077;48078;48079;48080;48081;48082;48083;48084;48085;48086;48087 48074 14 DGFQHPAR Unmodified 926.43586 0.4358634 3255 Q8IX12 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.312 11.428 2 0.023017 9609 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.682 50.376 39945000 0 0 0 3786900 2009200 2744400 2669500 3348000 2764900 3294400 0 3217600 6911100 4549400 4649100 7250 3255 6625 60662;60663;60664;60665;60666;60667;60668;60669;60670;60671;60672 48088;48089;48090;48091;48092 48090 5 DGFVALSK Unmodified 835.44397 0.44396847 3608 Q92499 DDX1 ATP-dependent RNA helicase DDX1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 49.997 48.295 2 0.0095736 54782 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 82.452 40.8 944360000 44203000 525410000 16203000 28716000 26748000 33587000 29037000 26098000 23833000 35893000 32854000 33853000 25425000 22376000 40117000 7251 3608 6626 60673;60674;60675;60676;60677;60678;60679;60680;60681;60682;60683;60684;60685;60686;60687;60688;60689 48093;48094;48095;48096;48097;48098;48099;48100;48101;48102;48103;48104;48105;48106 48093 14 DGFVQNVHTPR Unmodified 1268.6262 0.62618337 2179 Q10570 CPSF1 Cleavage and polyadenylation specificity factor subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 39.958 40.294 3 0.030111 44337 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 27.967 21.673 24961000 0 0 0 0 4116200 0 0 0 0 0 0 11151000 0 0 9694400 7252 2179 6627 60690;60691;60692 48107 48107 1 DGFVTVDELK Unmodified 1121.5605 0.56045479 376 O43852 CALU Calumenin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71.333 70.297 2 0.0054224 87364 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.731 70.58 1766500000 83818000 1355000000 13891000 12190000 12539000 10197000 13723000 19108000 11155000 19561000 44391000 42231000 17703000 35845000 75118000 7253 376 6628 60693;60694;60695;60696;60697;60698;60699;60700;60701;60702;60703;60704;60705;60706;60707 48108;48109;48110;48111;48112;48113;48114;48115;48116;48117;48118 48110 6 DGFYRQVNQISGAHNTSDK Unmodified 2135.9984 0.99844346 4769 Q9NZJ0 DTL Denticleless protein homolog yes yes 0 0 1 By MS/MS 2 0 1 1 53.173 45.158 3 0.0052407 62163 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 38.736 26.255 21086000 21086000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7254 4769 6629 60708 48119;48120;48121 48121 3 DGGAAAAGPRPEQEPR Unmodified 1577.7546 0.75463136 3411 Q8NCN4 RNF169 E3 ubiquitin-protein ligase RNF169 yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.195 19.391 3 0.00036431 19391 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 46.249 40.999 39254000 0 0 0 3088200 3300900 2588700 3508300 2302600 2457300 4124100 3487000 4779900 3011500 2622500 3983100 7255 3411 6630 60709;60710;60711;60712;60713;60714;60715;60716;60717;60718;60719;60720 48122;48123;48124;48125;48126;48127 48125 6 DGGAASPATEGRGGSEVEGGR Unmodified 1915.862 0.86200955 3094 Q7Z460 CLASP1 CLIP-associating protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.96 20.163 3 0.00046785 20745 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 42.64 31.696 55258000 0 0 0 3757800 3542600 3756900 4629800 4382700 3351200 5416700 4722300 8495700 3565400 3564200 6072400 7256 3094 6631 60721;60722;60723;60724;60725;60726;60727;60728;60729;60730;60731;60732 48128;48129;48130;48131 48130 4 DGGAWGTEQR Unmodified 1075.4683 0.46828574 881 P09382 LGALS1 Galectin-1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.195 22.402 2 0.0014446 22159 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 92.051 82.064 175840000 0 0 0 2917700 3707200 4093100 4431700 4261700 2520100 6489300 30436000 29136000 5418600 17154000 65272000 7257 881 6632 60733;60734;60735;60736;60737;60738;60739;60740;60741;60742;60743;60744 48132;48133;48134;48135;48136;48137;48138;48139;48140 48137 9 DGGGENTEEAQPQPQPQPQPQAQSQPPSSNK Unmodified 3255.4665 0.46645442 2442 Q14738 PPP2R5D Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 35.338 35.532 3 1.0989E-11 38412 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.256 40.624 47704000 0 0 0 4478500 3450400 0 2883100 0 0 5858200 9066000 8225200 0 5325300 8417000 7258 2442 6633 60745;60746;60747;60748;60749;60750;60751;60752 48141;48142;48143;48144;48145 48142 5 DGGGRGPDELEGPDSK Unmodified 1584.7016 0.70159273 1546 P48634 PRRC2A Protein PRRC2A yes yes 0 0 1 By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 2 24.968 25.317 2;3 0.0024067 26670 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 44.567 33.196 66980000 0 0 0 3123400 0 0 0 0 13675000 3490100 0 3678200 2287500 2892600 37833000 7259 1546 6634 60753;60754;60755;60756;60757;60758;60759;60760 48146;48147;48148 48147 3 DGGNQEVEIAR Unmodified 1186.5578 0.55782903 990 P13861 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.918 29.131 2 0.00028686 31380 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 109.66 96.627 201200000 0 0 0 8556700 13705000 0 13582000 10700000 11585000 21449000 30822000 15838000 21689000 18699000 34569000 7260 990 6635 60761;60762;60763;60764;60765;60766;60767;60768;60769;60770;60771;60772 48149;48150;48151;48152;48153;48154;48155;48156;48157;48158;48159;48160;48161;48162 48157 14 DGGNQEVEIARCHK Unmodified 1611.7424 0.74235211 990 P13861 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit yes yes 0 0 1 By MS/MS 2 0 1 1 23.569 20.653 3 7.5161E-24 26368 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 129.54 117.83 20156000 0 0 20156000 0 0 0 0 0 0 0 0 0 0 0 0 7261 990 6636 60773 48163 48163 1 DGGPVTSQESGQK Unmodified 1288.5895 0.58952309 4236 Q9BXW9 FANCD2 Fanconi anemia group D2 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 10.557 10.765 2 0.013973 8695 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.284 38.436 10387000 0 0 0 0 0 0 1122200 1363200 0 2107900 0 2031900 0 1094700 2667400 7262 4236 6637 60774;60775;60776;60777;60778;60779 48164;48165 48165 2 DGGSGNSTIIVSR Unmodified 1261.6262 0.62624295 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.977 35.158 2 2.457E-09 37458 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 115 102.78 262570000 0 0 0 11211000 9101400 26830000 13452000 9293000 18456000 25017000 30868000 33723000 21696000 22934000 39988000 7263 3119 6638 60780;60781;60782;60783;60784;60785;60786;60787;60788;60789;60790;60791 48166;48167;48168;48169;48170;48171;48172;48173;48174;48175;48176;48177 48169 12 DGGYRPAEDK Unmodified 1106.4993 0.49925152 712 O96006 ZBED1 Zinc finger BED domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 10.151 6.9654 2 5.9991E-12 8954 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 182.16 121.68 45551000 3466100 41525000 559950 0 0 0 0 0 0 0 0 0 0 0 0 7264 712 6639 60792;60793;60794;60795 48178;48179 48179 2 DGHFALEELAQAGYEVVGLDWTVAPK Unmodified 2814.3865 0.38646018 816 P06132 UROD Uroporphyrinogen decarboxylase yes yes 0 0 0 By MS/MS By MS/MS 2.67 0.471 1 2 2 1 100.8 95.736 3;4 3.458E-22 119275 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.524 59.301 17370000 14501000 2868700 0 0 0 0 0 0 0 0 0 0 0 0 0 7265 816 6640 60796;60797;60798 48180;48181;48182;48183;48184 48184 5 DGIAVDHVVGLNTEK Unmodified 1565.8049 0.80493559 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 65.133 63.793 3 0.0054119 77627 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 45.33 32.563 134510000 6493600 49804000 2932700 4685700 5440500 4398900 6625000 5302100 6522500 5971300 9607700 8450100 4621200 4744500 8912000 7266 3443 6641 60799;60800;60801;60802;60803;60804;60805;60806;60807;60808;60809;60810;60811;60812;60813;60814 48185;48186;48187;48188;48189;48190;48191 48187 7 DGIEFAFK Unmodified 925.45453 0.45453316 3326;3563 Q8N3U4;Q8WVM7 STAG2;STAG1 Cohesin subunit SA-2;Cohesin subunit SA-1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 75.809 75.923 2 0.025292 87010 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.815 28.146 94073000 0 0 0 0 3084700 9917400 5369000 5371800 5481600 9403100 11006000 10292000 9170900 8149000 16828000 7267 3326;3563 6642 60815;60816;60817;60818;60819;60820;60821;60822;60823;60824;60825 48192;48193;48194;48195 48194 4 DGIEPMWEDEK Unmodified 1347.5653 0.56528217 826 P06730 EIF4E Eukaryotic translation initiation factor 4E yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 2 1 1 1 1 1 1 1 1 1 67.378 66.401 2 0.00025931 76539 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 91.584 86.971 298100000 14188000 200490000 0 4440800 5012200 7613400 0 4932800 3495900 7764700 8168500 8830500 6144300 7021100 19993000 7268 826 6643 60826;60827;60828;60829;60830;60831;60832;60833;60834;60835;60836;60837;60838;60839 48196;48197;48198;48199;48200;48201;48202;48203;48204;48205;48206;48207;48208;48209;48210;48211 48203 16 DGIEPMWEDEK Oxidation (M) 1363.5602 0.56019679 826 P06730 EIF4E Eukaryotic translation initiation factor 4E yes yes 0 1 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 6.56 3.86 3 1 5 1 3 1 1 1 1 1 55.379 52.826 2 0.0013496 66554 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.806 74.715 126860000 7873400 101800000 0 0 0 2072500 0 0 0 2839200 0 4739200 0 3184000 4350800 7269 826 6643 60840;60841;60842;60843;60844;60845;60846;60847;60848 48212;48213;48214;48215 48213 994 4 DGIPVSSEAERHELGK Unmodified 1722.8537 0.8536767 5089 Q9Y282 ERGIC3 Endoplasmic reticulum-Golgi intermediate compartment protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 42.779 42.522 3 0.00063181 47538 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 41.088 28.255 130620000 0 0 17960000 6127500 7083700 11557000 9292900 11252000 5522100 12654000 16816000 21275000 0 11079000 0 7270 5089 6644 60849;60850;60851;60852;60853;60854;60855;60856;60857;60858;60859 48216;48217;48218;48219;48220;48221;48222;48223;48224 48221 8 DGIQLSEYLPEVK Unmodified 1489.7664 0.76642482 3548 Q8WUM0 NUP133 Nuclear pore complex protein Nup133 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 87.618 87.3 2 4.2825E-33 107230 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 169.81 130.5 178260000 0 144030000 0 0 0 1984900 2239500 2380500 2163600 6083900 3535400 3150100 1981800 3359400 7358700 7271 3548 6645 60860;60861;60862;60863;60864;60865;60866;60867;60868;60869;60870 48225;48226;48227;48228;48229;48230;48231;48232;48233;48234;48235 48228 11 DGIVLGADTR Unmodified 1015.5298 0.52982336 4007 Q99436 PSMB7 Proteasome subunit beta type-7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 46.285 46.876 2 0.011956 51986 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.327 11.218 129160000 0 0 0 0 0 0 0 0 0 0 37494000 0 0 0 91671000 7272 4007 6646 60871;60872;60873;60874;60875 48236;48237;48238;48239 48236 4 DGIVLGADTRATEGMVVADK Unmodified 2017.015 0.015004722 4007 Q99436 PSMB7 Proteasome subunit beta type-7 yes yes 0 0 1 By MS/MS By MS/MS 2.6 0.49 2 3 3 2 77.489 72.652 2;3 3.3312E-28 91519 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.8 92.125 111920000 62420000 49503000 0 0 0 0 0 0 0 0 0 0 0 0 0 7273 4007 6647 60876;60877;60878;60879;60880 48240;48241;48242;48243 48240 4 DGIVLGADTRATEGMVVADK Oxidation (M) 2033.0099 0.0099193444 4007 Q99436 PSMB7 Proteasome subunit beta type-7 yes yes 0 1 1 By MS/MS By MS/MS 2.67 0.471 1 2 2 1 66.448 61.545 2;3 0.00022687 75477 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 51.819 42.289 107600000 281820 107320000 0 0 0 0 0 0 0 0 0 0 0 0 0 7274 4007 6647 60881;60882;60883 48244;48245 48244 5486 2 DGKPVIEYQEEELLDK Unmodified 1903.9415 0.94148865 2020 P86791;P86790 CCZ1;CCZ1B Vacuolar fusion protein CCZ1 homolog;Vacuolar fusion protein CCZ1 homolog B yes no 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 77.49 72.028 3 0.00056983 92329 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.113 39.521 48756000 17509000 31246000 0 0 0 0 0 0 0 0 0 0 0 0 0 7275 2020 6648 60884;60885;60886 48246;48247 48247 2 DGLAFNALIHR Unmodified 1225.6568 0.65675521 356 O43707 ACTN4 Alpha-actinin-4 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 1 2 2 2 2 2 2 2 2 2 2 77.844 77.944 2;3 4.4543E-05 89415 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 112.71 96.04 554980000 0 0 0 5431700 5492400 52452000 13310000 14239000 21926000 27707000 47098000 57515000 17289000 47945000 244570000 7276 356 6649 60887;60888;60889;60890;60891;60892;60893;60894;60895;60896;60897;60898;60899;60900;60901;60902;60903;60904;60905;60906;60907;60908 48248;48249;48250;48251;48252;48253;48254;48255;48256;48257;48258;48259;48260;48261 48251 13 DGLALGPGPFVTALEYATDTK Unmodified 2135.0787 0.078650837 4336 Q9H0R4 HDHD2 Haloacid dehalogenase-like hydrolase domain-containing protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 101.83 97.117 2 0.00039388 119981 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.474 38.601 9126800 0 9126800 0 0 0 0 0 0 0 0 0 0 0 0 0 7277 4336 6650 60909 48262 48262 1 DGLEMEK Unmodified 820.36367 0.36366924 984 P13693 TPT1 Translationally-controlled tumor protein yes yes 0 0 0 By matching By MS/MS By matching 10 0 3 1 1 1 23.219 23.715 2 0.041811 23637 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 67.981 34.242 134780000 0 0 0 0 0 0 0 0 0 0 33748000 0 0 20712000 80321000 7278 984 6651 60910;60911;60912 48263 48263 1 DGLGGLPDIVR Unmodified 1110.6033 0.60332266 1488 P45974 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.498 80.559 2 0.00021305 92730 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 106.88 79.626 119070000 0 0 0 3426400 2684000 12860000 4268400 4947500 2369200 12876000 12300000 15842000 5736000 11129000 30630000 7279 1488 6652 60913;60914;60915;60916;60917;60918;60919;60920;60921;60922;60923;60924 48264;48265;48266;48267;48268;48269;48270;48271 48266 8 DGLGGLPDIVRDR Unmodified 1381.7314 0.73137672 1488 P45974 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 75.997 76.045 3 0.0017623 87250 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.135 30.401 76383000 0 0 0 2561400 1497400 8205900 2293200 3063400 0 6918000 5570600 9444000 0 6952400 29876000 7280 1488 6653 60925;60926;60927;60928;60929;60930;60931;60932;60933;60934 48272;48273;48274;48275;48276 48274 5 DGLGMTLPSPSFTVR Oxidation (M) 1592.7868 0.78684269 5053 Q9UPP1 PHF8 Histone lysine demethylase PHF8 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 80.567 80.618 2 0.0027903 93250 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 43.628 28.362 9309100 0 0 0 0 3128000 0 2444700 1682300 0 0 0 0 0 2054200 0 7281 5053 6654 60935;60936;60937;60938 48277 48277 6401 1 DGLILTSR Unmodified 873.49198 0.4919813 4015 Q99497 PARK7 Protein deglycase DJ-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 50.032 50.308 2 0.0048728 56586 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 109.01 48.364 345400000 0 0 0 19473000 0 0 0 9513400 0 0 53364000 56226000 8910100 56718000 141200000 7282 4015 6655 60939;60940;60941;60942;60943;60944;60945 48278;48279;48280;48281;48282;48283;48284;48285 48280 8 DGLIPLEIR Unmodified 1024.5917 0.59169534 2256 Q13228 SELENBP1 Selenium-binding protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 84.502 84.681 2 0.011616 97690 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.546 51.477 29270000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29270000 7283 2256 6656 60946 48286 48286 1 DGLITPTIAPNGAQVLQVK Unmodified 1934.0837 0.083676635 3135 Q86TG7 PEG10 Retrotransposon-derived protein PEG10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 86.237 85.818 2 3.3906E-17 105356 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.59 89.785 70252000 0 51736000 0 0 0 1637200 1374900 2918400 1626700 2697500 2291000 0 2692100 3278300 0 7284 3135 6657 60947;60948;60949;60950;60951;60952;60953;60954;60955;60956 48287;48288;48289;48290;48291;48292;48293;48294;48295 48290 9 DGLIVYEDSPLVK Unmodified 1446.7606 0.76061116 16 A3KMH1 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 81.712 81.902 2 0.013125 94734 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 53.237 36.566 3287300 0 0 0 0 0 0 0 3287300 0 0 0 0 0 0 0 7285 16 6658 60957;60958 48296;48297 48297 2 DGLLENQTPEFFQDVCK Unmodified 2038.9306 0.93060639 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 4 2 1 1 86.719 86.81 2;3 3.8752E-05 100551 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 76.522 64.99 15387000 0 0 0 0 0 7649800 0 0 0 0 0 0 0 2763300 4973500 7286 1565 6659 60959;60960;60961;60962 48298;48299;48300 48298 3 DGLLENQTPEFFQDVCKPK Unmodified 2264.0783 0.078333261 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 82.792 82.929 3 2.9467E-31 95653 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 108.75 101.31 78180000 0 0 0 0 0 3944600 0 3539500 0 6654000 5558100 5966000 0 5808200 46710000 7287 1565 6660 60963;60964;60965;60966;60967;60968;60969 48301;48302;48303;48304;48305;48306;48307 48304 6 DGLLIIGVHSAK Unmodified 1221.7081 0.70812208 3391 Q8NBF2 NHLRC2 NHL repeat-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 1 2 77.352 72.8 2;3 0.023937 89113 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 34.768 16.904 41117000 8136200 0 32981000 0 0 0 0 0 0 0 0 0 0 0 0 7288 3391 6661 60970;60971;60972 48308;48309;48310 48309 2 DGLLPENTFIVGYAR Unmodified 1663.857 0.85697116 947 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 89.763 89.893 2 6.8052E-06 104046 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.171 69.215 30260000 0 0 0 0 0 2104700 949270 0 0 2822700 3770700 3353400 0 2454300 14805000 7289 947 6662 60973;60974;60975;60976;60977;60978;60979 48311;48312;48313;48314;48315 48313 5 DGLLPTGLGQR Unmodified 1125.6142 0.6142217 1802 P58107 EPPK1 Epiplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.986 72.055 2 0.0068368 82767 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 55.549 39.347 57375000 0 0 0 6499400 3491300 4901200 4029500 5478900 2409600 4015300 4944600 6263400 4389300 3975600 6977000 7290 1802 6663 60980;60981;60982;60983;60984;60985;60986;60987;60988;60989;60990;60991 48316 48316 1 DGLNDDDFEPYLSPQAR Unmodified 1950.8595 0.85954994 5227 Q9Y5A9 YTHDF2 YTH domain-containing family protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.509 80.558 2 2.4805E-31 92813 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 151.99 151.99 127630000 0 0 0 4670800 5251100 7847900 6833400 10210000 0 14314000 14257000 11893000 7617400 11168000 33571000 7291 5227 6664 60992;60993;60994;60995;60996;60997;60998;60999;61000;61001;61002;61003 48317;48318;48319;48320;48321;48322;48323;48324;48325;48326;48327 48320 11 DGLNQTTIPVSPPSTTK Unmodified 1754.905 0.90504357 3029 Q71RC2 LARP4 La-related protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 2 1 1 1 1 66.613 66.654 2 7.4003E-07 76137 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 72.089 66.244 20445000 0 0 0 0 2550400 0 4336100 2406600 2978200 3767100 0 0 4406400 0 0 7292 3029 6665 61004;61005;61006;61007;61008;61009;61010;61011;61012 48328;48329;48330;48331;48332;48333;48334 48330 7 DGLSEAAAQSR Unmodified 1103.5207 0.52071524 2230 Q13057 COASY Bifunctional coenzyme A synthase;Phosphopantetheine adenylyltransferase;Dephospho-CoA kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 24.671 24.933 2 0.00036034 26760 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 98.044 65.203 85294000 0 0 0 8796600 0 15274000 0 9066700 4878600 7985100 9227500 8151700 0 0 21914000 7293 2230 6666 61013;61014;61015;61016;61017;61018;61019;61020;61021;61022;61023 48335;48336;48337;48338;48339;48340;48341;48342;48343;48344;48345;48346 48335 12 DGLTDVYNK Unmodified 1023.4873 0.48728985 1177 P24752 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 2 2 1 3 43.614 38.502 1;2 0.0073142 49497 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.6 62.809 283560000 178080 283390000 0 0 0 0 0 0 0 0 0 0 0 0 0 7294 1177 6667 61024;61025;61026;61027 48347;48348 48347 2 DGLTNAGELESDSGSDK Unmodified 1693.7279 0.72786706 1342 P35226 BMI1 Polycomb complex protein BMI-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 43.597 43.712 2 0.00015843 48973 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 94.688 87.799 17109000 0 0 0 0 2838500 0 3323700 0 0 5679600 0 0 0 0 5267600 7295 1342 6668 61028;61029;61030;61031;61032 48349;48350;48351;48352;48353 48349 5 DGLVSLLTTSEGADEPQR Unmodified 1886.9222 0.92215019 1658 P51570 GALK1 Galactokinase yes yes 0 0 0 By MS/MS 10 0 1 1 84.787 84.966 2 1.1118E-11 98126 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.45 91.908 5845600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5845600 7296 1658 6669 61033 48354 48354 1 DGMDNQGGYGSVGR Oxidation (M) 1427.5736 0.57355545 1308 P31942 HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 20.654 20.864 2 1.2426E-19 21502 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 136.96 126.43 114500000 0 0 0 5423300 11911000 8312100 10369000 0 7487000 6684900 15016000 15891000 12551000 11041000 9817600 7297 1308 6670 61034;61035;61036;61037;61038;61039;61040;61041;61042;61043;61044 48355;48356;48357;48358;48359;48360;48361;48362;48363;48364;48365;48366 48366 1934 11 DGMDNQGGYGSVGR Unmodified 1411.5786 0.57864083 1308 P31942 HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.392 30.581 2 7.2914E-19 31875 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 147.72 137.48 213900000 0 0 0 8857000 11900000 9235900 11056000 12506000 8761900 20959000 29506000 21729000 16386000 18385000 44616000 7298 1308 6670 61045;61046;61047;61048;61049;61050;61051;61052;61053;61054;61055;61056 48367;48368;48369;48370;48371;48372;48373;48374;48375;48376;48377;48378;48379 48374 13 DGMDPDFTYRK Unmodified 1343.5816 0.58160094 4630 Q9NSV4 DIAPH3 Protein diaphanous homolog 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 46.147 46.325 3 0.0025656 51572 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 52.693 44.767 137640000 0 0 0 6666900 4390200 9486800 0 13277000 5728700 16233000 11004000 20444000 19014000 10828000 20564000 7299 4630 6671 61057;61058;61059;61060;61061;61062;61063;61064;61065;61066;61067 48380;48381;48382;48383;48384;48385;48386;48387;48388;48389 48388 10 DGMHHTVTK Unmodified 1024.476 0.47601366 238 O14981 BTAF1 TATA-binding protein-associated factor 172 yes yes 0 0 0 By MS/MS 2 0 1 1 5.4664 3.2613 2 0.022632 4873 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 72.879 53.176 11388000 0 0 11388000 0 0 0 0 0 0 0 0 0 0 0 0 7300 238 6672 61068 48390 48390 1 DGMNIVLNK Unmodified 1002.5168 0.51681584 2860 Q68E01 INTS3 Integrator complex subunit 3 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 56.005 56.113 2 0.009185 62659 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.464 47.542 54149000 0 0 0 2980100 3598000 4489700 4092900 5065700 3079700 6586000 6783200 6706800 0 0 10767000 7301 2860 6673 61069;61070;61071;61072;61073;61074;61075;61076;61077;61078 48391;48392;48393 48392 3 DGMVSFHDNPEK Unmodified 1374.5874 0.5874146 5042 Q9UNS2 COPS3 COP9 signalosome complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.32 3.11 2 3 17 5 1 1 2 1 1 1 2 2 2 1 2 1 40.75 39.777 2;3 8.7091E-07 50389 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115 95.014 343670000 0 86200000 0 9810200 5899300 24714000 7952000 10612000 9646800 24811000 38352000 31278000 16217000 27861000 50320000 7302 5042 6674 61079;61080;61081;61082;61083;61084;61085;61086;61087;61088;61089;61090;61091;61092;61093;61094;61095;61096;61097;61098;61099;61100 48394;48395;48396;48397;48398;48399;48400;48401;48402;48403 48395 8 DGMVSFHDNPEK Oxidation (M) 1390.5823 0.58232922 5042 Q9UNS2 COPS3 COP9 signalosome complex subunit 3 yes yes 0 1 0 By matching By MS/MS By matching 2.33 0.471 4 2 2 3 1 30.111 25.607 2;3 0.00057795 33613 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.91 97.874 265360000 4215300 258190000 2956000 0 0 0 0 0 0 0 0 0 0 0 0 7303 5042 6674 61101;61102;61103;61104;61105;61106 48404;48405;48406;48407 48405 6389 3 DGNAFLDK Unmodified 878.4134 0.41339662 4662 Q9NV88 INTS9 Integrator complex subunit 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 33.575 33.948 2 0.026005 36947 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 58.23 24.492 22486000 0 0 0 0 0 0 0 0 4043500 4744600 7019600 6678100 0 0 0 7304 4662 6675 61107;61108;61109;61110 48408;48409 48409 2 DGNASGTTLLEALDCILPPTRPTDK Unmodified 2654.3221 0.32214536 1960 P68104;Q5VTE0 EEF1A1;EEF1A1P5 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.12 3.72 4 2 10 2 3 1 1 1 1 1 1 1 1 1 1 1 97.811 96.176 3 2.9421E-120 117642 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 158.69 151.41 952350000 231550000 519460000 43796000 17275000 1576100 2994800 0 3335800 3876900 29320000 16872000 9098900 0 3810500 69380000 7305 1960 6676 61111;61112;61113;61114;61115;61116;61117;61118;61119;61120;61121;61122;61123;61124;61125;61126 48410;48411;48412;48413;48414;48415;48416;48417;48418;48419;48420;48421;48422;48423;48424;48425;48426;48427;48428;48429;48430 48421 21 DGNDLHMTYK Unmodified 1192.5183 0.5182724 440 O60884 DNAJA2 DnaJ homolog subfamily A member 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 31.49 31.677 2;3 0.00064754 33411 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 115.7 107.76 355140000 0 0 0 15492000 23611000 23764000 16599000 18223000 13520000 30550000 42301000 44959000 23988000 31435000 70695000 7306 440 6677 61127;61128;61129;61130;61131;61132;61133;61134;61135;61136;61137;61138;61139;61140;61141;61142;61143;61144;61145;61146;61147;61148;61149;61150 48431;48432;48433;48434;48435;48436;48437 48432 3 DGNGEVLLEEFSEYIHAQVASGK Unmodified 2491.1867 0.18669774 640 O95302;Q75LS8 FKBP9;FKBP9P1 Peptidyl-prolyl cis-trans isomerase FKBP9;Putative FK506-binding protein 9-like protein yes no 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 100.59 95.177 3 1.1256E-116 119373 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 172.75 169.22 45215000 32394000 12821000 0 0 0 0 0 0 0 0 0 0 0 0 0 7307 640 6678 61151;61152;61153 48438;48439 48439 2 DGNGFVSAAELR Unmodified 1234.5942 0.59421454 1218 P27482 CALML3 Calmodulin-like protein 3 yes yes 0 0 0 By MS/MS 10 0 1 1 63.743 63.049 2 9.1218E-05 72859 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 88.576 73.425 30634000 0 0 0 30634000 0 0 0 0 0 0 0 0 0 0 0 7308 1218 6679 61154 48440 48440 1 DGNGYISAAELR Unmodified 1264.6048 0.60477922 912 P0DP25;P0DP24;P0DP23 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 60.188 58.624 2 4.4285E-07 73644 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.52 94.78 2471900000 28622000 1034400000 9220200 85658000 46367000 33198000 57649000 98796000 39619000 57164000 216920000 280070000 60255000 116630000 307320000 7309 912 6680 61155;61156;61157;61158;61159;61160;61161;61162;61163;61164;61165;61166;61167;61168;61169;61170;61171 48441;48442;48443;48444;48445;48446;48447;48448;48449;48450;48451;48452;48453;48454;48455;48456;48457;48458;48459;48460 48444 20 DGNIQEGDVVLK Unmodified 1285.6514 0.65139506 2136 Q07157 TJP1 Tight junction protein ZO-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 51.231 51.297 2 3.1012E-08 58120 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 129.85 101.64 179260000 0 0 0 21963000 17299000 0 17195000 12207000 18982000 29569000 0 24555000 19072000 18418000 0 7310 2136 6681 61172;61173;61174;61175;61176;61177;61178;61179;61180 48461;48462;48463;48464;48465;48466;48467;48468 48463 8 DGNITGIQQFSK Unmodified 1306.6517 0.65172941 4517 Q9HCK8 CHD8 Chromodomain-helicase-DNA-binding protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 57.256 57.245 2 0.001098 64182 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 88.24 69.46 73370000 0 0 0 9579900 9630200 0 7452700 0 0 0 0 0 9842500 12190000 24674000 7311 4517 6682 61181;61182;61183;61184;61185;61186 48469;48470;48471;48472;48473;48474;48475 48472 6 DGNLASTLGQHK Unmodified 1239.6208 0.62076364 4270 Q9BZK7 TBL1XR1 F-box-like/WD repeat-containing protein TBL1XR1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.08 2.5 2 1 22 2 1 2 2 2 2 2 2 1 2 2 2 1 2 34.888 34.522 2;3 0.00017503 38238 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 71.241 59.673 1406400000 0 378380000 13153000 37270000 46984000 74692000 56536000 83002000 49580000 74079000 171450000 123420000 86392000 34032000 177480000 7312 4270 6683 61187;61188;61189;61190;61191;61192;61193;61194;61195;61196;61197;61198;61199;61200;61201;61202;61203;61204;61205;61206;61207;61208;61209;61210;61211 48476;48477;48478;48479;48480;48481;48482;48483;48484;48485 48476 4 DGNLHEGDIILK Unmodified 1322.683 0.68302954 4867 Q9UDY2 TJP2 Tight junction protein ZO-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 8.74 2.92 3 16 1 1 1 2 1 2 1 2 2 1 2 1 1 1 53.919 53.079 2;3 0.007477 61425 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 61.344 34.83 317260000 7021900 48553000 3315200 19365000 7690300 25275000 11896000 0 11627000 22449000 32921000 35534000 27290000 23652000 40668000 7313 4867 6684 61212;61213;61214;61215;61216;61217;61218;61219;61220;61221;61222;61223;61224;61225;61226;61227;61228;61229;61230 48486;48487;48488;48489;48490;48491 48491 6 DGNPDNETYLHR Unmodified 1429.6222 0.6222202 4655;5016 Q9NUU7;Q9UMR2 DDX19A;DDX19B ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX19B no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 1 2 2 2 2 2 2 2 2 2 2 2 27.772 27.99 2;3 1.2191E-05 30319 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 127.4 115.91 927430000 0 0 0 7724500 46516000 104530000 62623000 69180000 41372000 108050000 102090000 101790000 77921000 73358000 132270000 7314 4655;5016 6685 61231;61232;61233;61234;61235;61236;61237;61238;61239;61240;61241;61242;61243;61244;61245;61246;61247;61248;61249;61250;61251;61252;61253 48492;48493;48494;48495;48496;48497;48498;48499;48500;48501;48502;48503;48504 48503 10 DGNVLLHEMQIQHPTASLIAK Unmodified 2314.2104 0.21035049 1410 P40227 CCT6A T-complex protein 1 subunit zeta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS 5.53 3.83 8 3 8 5 4 2 1 1 1 2 1 2 83.778 80.831 3;4 3.6946E-33 92983 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 124 112.7 1547400000 900110000 513820000 8006400 0 0 3296900 0 2781300 2152200 8011100 0 0 0 2375100 106820000 7315 1410 6686 61254;61255;61256;61257;61258;61259;61260;61261;61262;61263;61264;61265;61266;61267;61268;61269;61270;61271;61272 48505;48506;48507;48508;48509;48510;48511;48512;48513;48514;48515;48516 48509 9 DGNVLLHEMQIQHPTASLIAK Oxidation (M) 2330.2053 0.20526511 1410 P40227 CCT6A T-complex protein 1 subunit zeta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.39 4 13 2 1 1 1 2 2 2 1 2 1 2 72.656 71.427 2;3;4 1.7828E-21 81828 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 95.206 86.386 1641500000 920850000 90642000 24909000 0 0 0 3088500 60984000 39946000 0 105040000 35676000 57344000 25921000 277090000 7316 1410 6686 61273;61274;61275;61276;61277;61278;61279;61280;61281;61282;61283;61284;61285;61286;61287;61288;61289 48517;48518;48519;48520;48521;48522;48523;48524;48525;48526;48527;48528 48523 2209 11 DGNVTCEREVPGPDCR Unmodified 1859.789 0.78904431 2626 Q16658 FSCN1 Fascin yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 32.774 33.288 3 0.00073797 35406 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.237 46.457 16355000 0 0 0 0 0 0 0 0 0 0 0 0 0 5295500 11060000 7317 2626 6687 61290;61291 48529 48529 1 DGPALSGPQSR Unmodified 1083.5309 0.530886 1097 P19971 TYMP Thymidine phosphorylase yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 25.366 25.601 2 0.021312 27230 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 42.348 19.857 31695000 0 0 0 0 1708500 5180200 2938200 0 1431600 2483900 3681900 4440500 0 3101600 6729000 7318 1097 6688 61292;61293;61294;61295;61296;61297;61298;61299;61300 48530;48531 48530 1 DGPLNMILDDGGDLTNLIHTK Oxidation (M) 2267.1104 0.11036167 1164 P23526 AHCY Adenosylhomocysteinase yes yes 0 1 0 By MS/MS By MS/MS 2.25 0.433 6 2 4 4 98.143 92.326 3 1.0425E-151 112547 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 216.31 207.13 1043200000 505020000 538180000 0 0 0 0 0 0 0 0 0 0 0 0 0 7319 1164 6689 61301;61302;61303;61304;61305;61306;61307;61308 48532;48533;48534;48535;48536;48537;48538;48539;48540 48538 1681 9 DGPLNMILDDGGDLTNLIHTK Unmodified 2251.1154 0.11544705 1164 P23526 AHCY Adenosylhomocysteinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.27 0.445 8 3 6 4 1 98.727 93.185 2;3 5.1856E-113 113969 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 191.22 182.91 1100700000 826480000 272080000 2135500 0 0 0 0 0 0 0 0 0 0 0 0 7320 1164 6689 61309;61310;61311;61312;61313;61314;61315;61316;61317;61318;61319 48541;48542;48543;48544;48545;48546;48547;48548;48549;48550;48551;48552;48553 48545 11 DGPPHQVLVVPLHSR Unmodified 1649.9002 0.90017338 2654 Q2NL82 TSR1 Pre-rRNA-processing protein TSR1 homolog yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 60.908 61.067 3 0.01038 70540 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 45.14 37.769 91581000 0 0 0 5667500 0 7206400 4258400 8043300 4606900 6967100 11750000 10385000 9170800 8392600 15133000 7321 2654 6690 61320;61321;61322;61323;61324;61325;61326;61327;61328;61329;61330 48554;48555;48556;48557;48558;48559 48559 0 DGPSLLVVEQVR Unmodified 1310.7194 0.71941505 3314 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 79.381 79.477 2 2.5886E-05 91910 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 100.48 86.707 88189000 0 0 0 0 5206100 9092400 6396700 5588500 5363000 13161000 0 9295500 6090800 10542000 17453000 7322 3314 6691 61331;61332;61333;61334;61335;61336;61337;61338;61339;61340 48560;48561;48562;48563;48564;48565;48566;48567 48561 8 DGPSLLVVEQVRVVDLEGSLK Unmodified 2251.2424 0.24236212 3314 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 96.801 90.983 3 9.8922E-59 115198 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 133.94 119.63 111990000 111990000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7323 3314 6692 61341;61342 48568;48569;48570 48569 3 DGPSSAPATPTK Unmodified 1127.5459 0.54586736 3893 Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 16.478 16.67 2 0.014933 16914 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 43.282 19.31 3850900 0 0 0 1638900 0 0 0 0 0 0 2212000 0 0 0 0 7324 3893 6693 61343;61344 48571;48572 48572 2 DGPVGFADFVYK Unmodified 1313.6292 0.62920306 344 O43592 XPOT Exportin-T yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 85.401 84.751 2 0.0022076 104439 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.658 72.811 560710000 0 446340000 13568000 3490900 4416800 13686000 4125400 6105000 4101600 10023000 8062100 8882100 5021500 7552100 25337000 7325 344 6694 61345;61346;61347;61348;61349;61350;61351;61352;61353;61354;61355;61356;61357;61358;61359;61360 48573;48574;48575;48576;48577;48578;48579;48580;48581;48582;48583;48584;48585;48586;48587;48588 48576 16 DGPVPAHEPSHR Unmodified 1297.6163 0.61634696 5178 Q9Y3X0 CCDC9 Coiled-coil domain-containing protein 9 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.892 14.055 3 0.034215 12851 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 25.178 9.0397 41448000 0 0 0 3301200 2534300 1631200 2155700 1985300 1691500 4573000 3675200 5205700 3838600 3863900 6992200 7326 5178 6695 61361;61362;61363;61364;61365;61366;61367;61368;61369;61370;61371;61372 48589 48589 1 DGPVRPQNAEEEK Unmodified 1467.6954 0.69538514 3610 Q92504 SLC39A7 Zinc transporter SLC39A7 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 2 1 1 1 15.11 15.307 3 0.00050686 13910 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 63.181 52.365 76631000 0 0 0 6838400 3922800 3361200 6904200 5876300 0 5130000 8537500 10820000 10741000 7029400 7470800 7327 3610 6696 61373;61374;61375;61376;61377;61378;61379;61380;61381;61382;61383;61384 48590;48591;48592;48593;48594;48595;48596 48593 7 DGPVVTALK Unmodified 898.51238 0.51238239 1784 P56524 HDAC4 Histone deacetylase 4 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 46.179 45.183 2 0.02892 50974 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 48.794 19.484 143420000 2092900 63198000 0 7305700 6672200 8460000 7775100 0 0 9830600 8544600 10249000 6482300 5538100 7276100 7328 1784 6697 61385;61386;61387;61388;61389;61390;61391;61392;61393;61394;61395;61396 48597;48598;48599 48597 3 DGQAMLWDLNEGK Oxidation (M) 1491.6664 0.6663932 1950 P63244 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 4.83 3.67 3 1 2 1 2 1 1 1 72.366 69.12 2 0.00046541 80047 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.289 64.069 245870000 8838600 218500000 4267700 0 0 0 0 0 0 0 0 5462200 0 0 8806800 7329 1950 6698 61397;61398;61399;61400;61401;61402 48600;48601;48602;48603;48604;48605 48601 3133 6 DGQAMLWDLNEGK Unmodified 1475.6715 0.67147858 1950 P63244 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.67 3.89 4 1 4 1 3 1 1 1 1 1 80.689 78.17 2 6.1869E-21 96161 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 139.54 134.58 760360000 24414000 681620000 3966200 0 0 0 0 0 0 0 5496000 6762800 0 6803500 31296000 7330 1950 6698 61403;61404;61405;61406;61407;61408;61409;61410;61411 48606;48607;48608;48609;48610;48611;48612;48613;48614;48615 48607 10 DGQILPVPNVVVR Unmodified 1404.8089 0.80889876 4806 Q9P258 RCC2 Protein RCC2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 84.253 84.318 2 0.00043205 97256 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.986 74.765 390040000 0 0 0 19379000 25011000 27961000 29678000 26958000 25675000 36364000 37503000 45539000 17840000 24647000 73490000 7331 4806 6699 61412;61413;61414;61415;61416;61417;61418;61419;61420;61421;61422;61423 48616;48617;48618;48619;48620;48621;48622;48623;48624;48625;48626;48627;48628;48629 48619 14 DGQLTVGLVGYPNVGK Unmodified 1615.857 0.85697116 4317 Q9H089 LSG1 Large subunit GTPase 1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 80.268 79.969 2 5.2444E-07 97508 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.46 86.885 82905000 0 39135000 0 0 2109600 3987700 2850900 3191700 3543300 5244400 4540400 4820000 3311400 3489700 6680600 7332 4317 6700 61424;61425;61426;61427;61428;61429;61430;61431;61432;61433;61434;61435 48630;48631;48632;48633;48634;48635;48636;48637;48638;48639;48640 48633 11 DGQMLPGEDEPLHALVTANTMENVK Oxidation (M) 2724.2735 0.27348061 2554 Q15637 SF1 Splicing factor 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 86.84 82.183 3 2.0998E-12 103911 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.049 68.937 278520000 8209100 263990000 6320600 0 0 0 0 0 0 0 0 0 0 0 0 7333 2554 6701 61436;61437;61438;61439 48641;48642;48643;48644 48644 4186;4187 4 DGQMLPGEDEPLHALVTANTMENVK Unmodified 2708.2786 0.27856599 2554 Q15637 SF1 Splicing factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 89.404 84.736 3 2.0517E-25 106332 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.679 90.974 281070000 9623900 268110000 3328800 0 0 0 0 0 0 0 0 0 0 0 0 7334 2554 6701 61440;61441;61442;61443 48645;48646;48647;48648;48649;48650 48645 6 DGQMLPGEDEPLHALVTANTMENVK 2 Oxidation (M) 2740.2684 0.26839523 2554 Q15637 SF1 Splicing factor 1 yes yes 0 2 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 9 2.45 1 6 1 1 1 1 1 1 1 79.631 79.316 3 5.5873E-08 91432 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.328 37.336 142390000 0 6496700 0 0 0 0 8272600 8981500 0 28768000 25675000 22155000 0 0 42039000 7335 2554 6701 61444;61445;61446;61447;61448;61449;61450 48651;48652 48651 4186;4187 2 DGQPCMDHDRQTGEGVGPQEYTLLK Oxidation (M) 2846.26 0.25995581 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 66.256 60.229 4 2.9895E-05 80508 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 59.212 47.016 19262000 9399900 0 9862100 0 0 0 0 0 0 0 0 0 0 0 0 7336 4819 6702 61451;61452 48653;48654;48655 48654 6182 2 DGQPCMDHDRQTGEGVGPQEYTLLK Unmodified 2830.265 0.26504119 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 70.365 64.384 4 0.00041803 79610 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 43.162 40.689 26668000 17832000 0 8836200 0 0 0 0 0 0 0 0 0 0 0 0 7337 4819 6702 61453;61454 48656;48657 48657 2 DGQPSDPNKLPSVEENK Unmodified 1852.8803 0.88028538 2433 Q14686 NCOA6 Nuclear receptor coactivator 6 yes yes 0 0 1 By MS/MS By matching 10 0 2 1 1 39.039 39.135 3 0.026683 43182 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 27.526 22.909 12497000 0 0 0 0 0 0 6821800 0 5675100 0 0 0 0 0 0 7338 2433 6703 61455;61456 48658 48658 1 DGQVINETSQHHDDLE Unmodified 1835.7922 0.79219865 870 P08670 VIM Vimentin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.35 2.15 3 1 44 1 3 4 5 4 5 3 3 4 3 2 4 4 3 35.248 34.92 2;3 1.4953E-99 38330 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 216.84 211.24 20752000000 12211000 83381000 0 1337800000 1163100000 1555300000 1362500000 1435100000 1017000000 2042500000 1730300000 2856900000 1952800000 1596800000 2606800000 7339 870 6704 61457;61458;61459;61460;61461;61462;61463;61464;61465;61466;61467;61468;61469;61470;61471;61472;61473;61474;61475;61476;61477;61478;61479;61480;61481;61482;61483;61484;61485;61486;61487;61488;61489;61490;61491;61492;61493;61494;61495;61496;61497;61498;61499;61500;61501;61502;61503;61504 48659;48660;48661;48662;48663;48664;48665;48666;48667;48668;48669;48670;48671;48672;48673;48674;48675;48676;48677;48678;48679;48680;48681 48673 19 DGQVLFQK Unmodified 933.49198 0.4919813 3578 Q8WWW0 RASSF5 Ras association domain-containing protein 5 yes yes 0 0 0 By MS/MS 2 0 1 1 43.833 38.613 2 0.0025602 50224 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.62 79.319 28956000 0 28956000 0 0 0 0 0 0 0 0 0 0 0 0 0 7340 3578 6705 61505 48682 48682 1 DGRAGVVANDAGDRVTPAVVAYSENEEIVGLAAK Unmodified 3412.7223 0.72227518 2175 Q0VDF9 HSPA14 Heat shock 70 kDa protein 14 yes yes 0 0 2 By MS/MS 2 0 1 1 87.761 79.63 4 2.546E-118 103649 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 136.63 128.86 22565000 22565000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7341 2175 6706 61506 48683 48683 1 DGRFEGRPVPDGDAK Unmodified 1614.775 0.77503245 10 A1X283 SH3PXD2B SH3 and PX domain-containing protein 2B yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 27.396 27.495 3 0.029765 29595 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 33.915 15.458 45296000 0 0 0 0 6067600 9551100 5743100 0 0 10961000 0 12974000 0 0 0 7342 10 6707 61507;61508;61509;61510;61511 48684 48684 1 DGRGALQNIIPASTGAAK Unmodified 1738.9326 0.93259572 782 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 2 1 1 1 1 1 1 2 2 1 2 2 66.726 66.831 2;3 1.1666E-05 75849 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 66.893 66.893 610450000 0 0 0 40058000 7450200 9464300 10371000 10930000 7306900 11001000 88362000 84379000 10159000 67440000 263530000 7343 782 6708 61512;61513;61514;61515;61516;61517;61518;61519;61520;61521;61522;61523;61524;61525;61526;61527;61528 48685;48686;48687;48688;48689;48690 48687 2 DGRGYVPATIK Unmodified 1175.6299 0.62987176 1449 P42226 STAT6 Signal transducer and activator of transcription 6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 2 3 2 43.388 38.226 2;3 0.03669 47939 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 62.823 17.741 224800000 127190000 77758000 19853000 0 0 0 0 0 0 0 0 0 0 0 0 7344 1449 6709 61529;61530;61531;61532;61533;61534;61535 48691;48692;48693 48692 3 DGRISHLNDLSIPVDEEDPSEDIFTVLTAEEK Unmodified 3582.7213 0.72133171 3950 Q96PZ0 PUS7 Pseudouridylate synthase 7 homolog yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 97.602 91.78 4 1.0145E-167 115996 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 163.92 157.59 111230000 111230000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7345 3950 6710 61536;61537 48694;48695 48695 2 DGRPLQPHVR Unmodified 1173.6367 0.63668847 4505 Q9HC35 EML4 Echinoderm microtubule-associated protein-like 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 17.962 17.93 3 0.010174 17865 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 50.292 34.155 15900000 0 0 0 0 3849200 5716100 5564600 0 770530 0 0 0 0 0 0 7346 4505 6711 61538;61539;61540;61541 48696 48696 1 DGRVGMIPVPYVEK Oxidation (M) 1574.8127 0.81266351 1500 P46109 CRKL Crk-like protein yes yes 0 1 1 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 75.381 69.48 3 0.0040749 90334 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.527 43.124 51878000 31538000 20340000 0 0 0 0 0 0 0 0 0 0 0 0 0 7347 1500 6712 61542;61543 48697;48698 48698 2369 2 DGRVGMIPVPYVEK Unmodified 1558.8177 0.81774888 1500 P46109 CRKL Crk-like protein yes yes 0 0 1 By MS/MS 2 0 1 1 83.201 75.071 3 0.0083743 98106 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.983 33.2 33454000 33454000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7348 1500 6712 61544 48699 48699 1 DGSASAAAK Unmodified 776.36645 0.36644643 1473 P43243 MATR3 Matrin-3 yes yes 0 0 0 By MS/MS 1 0 1 1 106.24 111.5 2 0.0024174 92138 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 117.4 57.758 84431000 84431000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7349 1473 6713 61545 48700 48700 1 DGSCGVAYVVQEPGDYEVSVK Unmodified 2257.0209 0.020877961 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.37 3.28 2 3 1 24 4 2 1 2 2 2 2 2 2 2 2 2 3 2 79.724 79.169 2;3 2.7664E-239 93149 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 246.96 234.4 691680000 138870000 147930000 0 3276200 20569000 27576000 16036000 24807000 19274000 42089000 52221000 55893000 13590000 38004000 91552000 7350 1124 6714 61546;61547;61548;61549;61550;61551;61552;61553;61554;61555;61556;61557;61558;61559;61560;61561;61562;61563;61564;61565;61566;61567;61568;61569;61570;61571;61572;61573;61574;61575 48701;48702;48703;48704;48705;48706;48707;48708;48709;48710;48711;48712;48713;48714;48715;48716;48717;48718;48719;48720;48721;48722;48723;48724;48725 48705 17 DGSCSVEYIPYEAGTYSLNVTYGGHQVPGSPFK Unmodified 3578.63 0.63001428 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS 2 0 1 1 90.65 88.177 3 0.045592 106730 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 14.266 12.351 4132200 0 0 4132200 0 0 0 0 0 0 0 0 0 0 0 0 7351 1124 6715 61576 48726 48726 1 DGSDEPGTAACPNGSFHCTNTGYK Unmodified 2542.0125 0.012514894 996 P14314 PRKCSH Glucosidase 2 subunit beta yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 43.748 38.752 3 7.2575E-47 50034 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.18 115.08 141210000 0 141210000 0 0 0 0 0 0 0 0 0 0 0 0 0 7352 996 6716 61577;61578 48727;48728;48729 48727 3 DGSDVIYPAR Unmodified 1091.5247 0.52473799 1191 P25685 DNAJB1 DnaJ homolog subfamily B member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 39.882 40.157 2 0.0014466 43462 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 91.069 72.666 98930000 0 0 0 7374700 0 0 9369300 6698900 0 8479900 10288000 15403000 7581900 10167000 23568000 7353 1191 6717 61579;61580;61581;61582;61583;61584;61585;61586;61587;61588;61589 48730;48731;48732;48733;48734;48735;48736;48737;48738;48739;48740;48741 48737 12 DGSGDSHPDFPEDADIDLK Unmodified 2028.8549 0.85485849 2162 Q08752 PPID Peptidyl-prolyl cis-trans isomerase D yes yes 0 0 0 By MS/MS By MS/MS 2.4 0.49 3 2 2 3 75.151 69.945 3 1.3886E-09 85556 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 94.384 93.115 220490000 49520000 170970000 0 0 0 0 0 0 0 0 0 0 0 0 0 7354 2162 6718 61590;61591;61592;61593;61594 48742;48743;48744;48745;48746;48747 48745 5 DGSGGASGTLQPSSGGGSSNSR Unmodified 1921.8362 0.83618873 4752 Q9NYV4 CDK12 Cyclin-dependent kinase 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 2 2 2 2 1 2 1 18.95 19.122 2;3 4.366E-66 19768 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 154.6 116.57 163860000 0 0 0 12028000 10828000 14909000 13033000 12396000 13198000 20337000 15372000 20374000 7478500 12840000 11072000 7355 4752 6719 61595;61596;61597;61598;61599;61600;61601;61602;61603;61604;61605;61606;61607;61608;61609;61610;61611;61612;61613;61614;61615;61616 48748;48749;48750;48751;48752;48753;48754 48748 6 DGSGLEEK Unmodified 833.37668 0.37667677 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 0 0 By MS/MS 1 0 1 1 106.52 111.78 2 0.0025172 92458 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 122.13 64.665 95277000 95277000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7356 1564 6720 61617 48755 48755 1 DGSLANNPYPGDVTK Unmodified 1546.7264 0.72635092 2779 Q5T6F2 UBAP2 Ubiquitin-associated protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 48.509 48.48 2 7.2393E-11 54946 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 122.7 104.39 246890000 0 0 0 23971000 27652000 0 42299000 37351000 32302000 0 0 0 41670000 41650000 0 7357 2779 6721 61618;61619;61620;61621;61622;61623;61624 48756;48757;48758;48759;48760 48760 5 DGSLASNPYSGDLTK Unmodified 1523.7104 0.71036651 2380 Q14157 UBAP2L Ubiquitin-associated protein 2-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.706 55.832 2 2.6601E-49 63564 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 167.2 144.56 2066400000 0 0 0 115730000 107430000 114180000 181520000 150820000 138110000 207690000 234140000 240850000 165790000 146730000 263360000 7358 2380 6722 61625;61626;61627;61628;61629;61630;61631;61632;61633;61634;61635;61636 48761;48762;48763;48764;48765;48766;48767;48768;48769;48770;48771;48772;48773;48774;48775;48776;48777;48778;48779;48780;48781;48782 48772 22 DGSLEDDEDEEDDLDEGVGGK Unmodified 2236.8615 0.86151959 2189 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 0 0 0 By MS/MS By MS/MS By matching 7 4.24 1 2 1 1 1 72.463 74.017 2 4.3371E-86 91892 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 155.98 150.82 21522000 12073000 0 0 6708900 0 2739300 0 0 0 0 0 0 0 0 0 7359 2189 6723 61637;61638;61639 48783;48784 48783 2 DGSLEVTGQLGEVMK Oxidation (M) 1577.7607 0.76068752 1379 P36776 LONP1 Lon protease homolog, mitochondrial yes yes 0 1 0 By MS/MS 2 0 1 1 68.251 62.351 2 0.0066961 79519 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 55.776 40.804 14213000 0 14213000 0 0 0 0 0 0 0 0 0 0 0 0 0 7360 1379 6724 61640 48785;48786 48786 2137 2 DGSLPPELSCIPSHR Unmodified 1663.7988 0.79880436 2768 Q5T1M5 FKBP15 FK506-binding protein 15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 69.293 69.356 3 0.00028293 79628 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 64.394 47.175 67605000 0 0 0 3241400 5053100 5790700 5475100 5572900 3642200 5540800 7135100 8485900 6757600 0 10910000 7361 2768 6725 61641;61642;61643;61644;61645;61646;61647;61648;61649;61650;61651 48787;48788;48789;48790;48791;48792;48793;48794;48795;48796;48797;48798;48799 48787 12 DGSNVIVTER Unmodified 1088.5462 0.54620171 2075 Q02413 DSG1 Desmoglein-1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 31.889 31.973 2 0.00067415 35310 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 121.73 77.925 146000000 0 0 0 54620000 8954500 0 0 51124000 0 0 0 17188000 14108000 0 0 7362 2075 6726 61652;61653;61654;61655;61656;61657 48800;48801;48802;48803;48804 48804 4 DGSPIADDLLEK Unmodified 1271.6245 0.62451161 4252 Q9BYT8 NLN Neurolysin, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2.67 0.471 1 2 1 2 76.128 72.03 2 0.0029216 89427 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.417 57.541 318530000 457510 318070000 0 0 0 0 0 0 0 0 0 0 0 0 0 7363 4252 6727 61658;61659;61660 48805;48806 48805 2 DGSTMLIEAAK Oxidation (M) 1150.554 0.5539892 472;3250 Q8IWZ3;O75179 ANKHD1;ANKRD17 Ankyrin repeat and KH domain-containing protein 1;Ankyrin repeat domain-containing protein 17 no no 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 42.863 42.986 2 0.0043313 48095 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 56.209 39.097 80495000 0 0 0 0 7543200 6226000 10540000 8272300 12727000 0 11861000 0 13316000 10010000 0 7364 3250;472 6728 61661;61662;61663;61664;61665;61666;61667;61668 48807;48808;48809;48810;48811 48809 594 5 DGSTMLIEAAK Unmodified 1134.5591 0.55907458 472;3250 Q8IWZ3;O75179 ANKHD1;ANKRD17 Ankyrin repeat and KH domain-containing protein 1;Ankyrin repeat domain-containing protein 17 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 56.654 56.88 2 0.0069617 64572 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 55.235 45.206 99073000 0 0 0 0 7318300 0 0 12421000 8882200 0 11986000 15362000 14584000 12090000 16429000 7365 3250;472 6728 61669;61670;61671;61672;61673;61674;61675;61676 48812;48813;48814;48815;48816;48817 48815 5 DGSVAIASK Unmodified 846.4447 0.44469675 1774 P55809 OXCT1 Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial yes yes 0 0 0 By MS/MS 1 0 1 1 106.83 112.1 2 0.023396 92864 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 72.23 26.895 19798000 19798000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7366 1774 6729 61677 48818 48818 1 DGTAGIPNLQLYDVK Unmodified 1602.8253 0.82533668 4242 Q9BY44 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 83.751 82.562 2 2.7423E-07 101297 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.17 103.69 984770000 16498000 826940000 0 2316700 3867600 12620000 4880800 6987200 3965200 17805000 15348000 20204000 6760500 14433000 32142000 7367 4242 6730 61678;61679;61680;61681;61682;61683;61684;61685;61686;61687;61688;61689;61690;61691;61692;61693 48819;48820;48821;48822;48823;48824;48825;48826;48827;48828;48829;48830 48822 11 DGTCTVTYLPTLPGDYSILVK Unmodified 2312.161 0.16100026 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS 2.5 0.5 2 2 4 97.083 93.057 2;3 1.7729E-29 114834 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 162.88 150.9 404000000 0 404000000 0 0 0 0 0 0 0 0 0 0 0 0 0 7368 487 6731 61694;61695;61696;61697 48831;48832;48833 48832 3 DGTDGETEVGEIQQNK Unmodified 1718.7595 0.75950154 2912 Q6NZY4 ZCCHC8 Zinc finger CCHC domain-containing protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.402 37.582 2 3.6313E-31 41288 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 178.81 162.18 82918000 0 0 0 4785100 5184900 7936200 4011900 3306500 3712500 7896900 9387700 9714000 7993100 5802300 13187000 7369 2912 6732 61698;61699;61700;61701;61702;61703;61704;61705;61706;61707;61708;61709 48834;48835;48836;48837;48838;48839;48840;48841;48842;48843;48844;48845 48843 12 DGTFDNIYLHVQISNESAIDFYRK Unmodified 2844.3719 0.37187274 4310 Q9GZZ1 NAA50 N-alpha-acetyltransferase 50 yes yes 0 0 1 By MS/MS 3 0 1 1 91.499 87.973 4 0.04168 90233 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 14.064 13.185 2648100 2648100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7370 4310 6733 61710 48846 48846 1 DGTGVVEFVR Unmodified 1077.5455 0.54547343 2145 Q07955 SRSF1 Serine/arginine-rich splicing factor 1 yes yes 0 0 0 By MS/MS 10 0 1 1 62.76 63.113 2 0.0094732 72114 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 57.708 38.194 9717700 0 0 0 0 0 0 0 0 0 0 9717700 0 0 0 0 7371 2145 6734 61711 48847 48847 1 DGTGVVEFVRK Unmodified 1205.6404 0.64043645 2145 Q07955 SRSF1 Serine/arginine-rich splicing factor 1 yes yes 0 0 1 By MS/MS 10 0 1 1 50.144 50.453 3 0.031045 57127 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 45.829 33.541 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7372 2145 6735 61712 48848 48848 1 DGTIDFTPGSELLITK Unmodified 1705.8774 0.87743183 121 O00159 MYO1C Unconventional myosin-Ic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 87.219 87.287 2 3.9191E-06 100974 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.565 68.138 72425000 0 0 0 2091500 6434700 6077100 5060000 4098600 4979900 7389200 6527200 9012700 4668700 6031200 10054000 7373 121 6736 61713;61714;61715;61716;61717;61718;61719;61720;61721;61722;61723;61724 48849;48850;48851;48852;48853;48854;48855;48856;48857;48858;48859;48860 48852 12 DGTILCTLMNK Unmodified 1264.6155 0.6155436 4008 Q99439 CNN2 Calponin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 81.665 80.969 2 3.9562E-10 99860 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 150.36 122.14 331830000 0 194870000 1390700 5743200 9146900 0 9302400 18610000 7205100 12805000 13329000 13335000 8396800 11594000 26100000 7374 4008 6737 61725;61726;61727;61728;61729;61730;61731;61732;61733;61734;61735;61736;61737;61738 48861;48862;48863;48864;48865;48866;48867;48868;48869;48870;48871;48872;48873 48863 11 DGTILCTLMNK Oxidation (M) 1280.6105 0.61045823 4008 Q99439 CNN2 Calponin-2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.47 2 1 14 1 1 2 2 1 1 2 2 1 1 1 65.673 65.768 2 0.0020627 74436 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 64.654 50.447 83990000 0 0 0 3745600 11323000 0 10760000 4963400 3732500 0 15700000 16058000 5778600 5287000 6641200 7375 4008 6737 61739;61740;61741;61742;61743;61744;61745;61746;61747;61748;61749;61750;61751;61752;61753 48874;48875;48876;48877;48878;48879;48880;48881;48882;48883;48884 48874 5493 8 DGTISEDTIR Unmodified 1105.5251 0.52513192 4063 Q99816 TSG101 Tumor susceptibility gene 101 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 34.851 34.849 2 0.0033461 38337 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 76.827 44.507 73034000 0 0 0 9299600 7786000 0 14095000 11128000 0 0 0 0 12493000 18232000 0 7376 4063 6738 61754;61755;61756;61757;61758;61759 48885;48886;48887;48888;48889 48885 4 DGTLFAWGNGEK Unmodified 1293.599 0.59896556 4242 Q9BY44 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 75.804 75.997 2 2.5886E-05 87202 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.48 91.564 26478000 0 0 0 0 0 0 0 2690400 0 4293000 2327500 4359000 0 3094300 9714200 7377 4242 6739 61760;61761;61762;61763;61764;61765;61766 48890;48891 48891 2 DGTLGALHTSSKPTALPSASSAYFPGQLPNS Unmodified 3071.52 0.51999354 2977 Q6UVJ0 SASS6 Spindle assembly abnormal protein 6 homolog yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 82.547 82.716 3 1.2214E-33 95494 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.838 58.697 39142000 0 0 0 0 0 0 0 4599800 2376400 7162200 5499900 5039000 0 0 14465000 7378 2977 6740 61767;61768;61769;61770;61771;61772 48892;48893;48894;48895 48893 4 DGTSFGEYGGWYK Unmodified 1465.615 0.61500956 2143 Q07866 KLC1 Kinesin light chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.64 2.9 1 1 9 2 1 1 1 1 1 1 1 1 1 75.068 74.388 2 0.00057508 85982 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 77.379 63.925 135220000 0 78105000 0 2076200 0 5611300 2912500 0 0 5706200 10225000 6748300 4626700 4199400 15009000 7379 2143 6741 61773;61774;61775;61776;61777;61778;61779;61780;61781;61782;61783 48896;48897;48898;48899;48900;48901;48902;48903;48904;48905 48896 10 DGTTDVTRTMHFGTPTAYEK Unmodified 2227.0215 0.021546663 4578 Q9NQW7 XPNPEP1 Xaa-Pro aminopeptidase 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 4 2 2 69.844 63.863 3;4 0.00010044 79069 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 68.567 59.748 59065000 25008000 0 34058000 0 0 0 0 0 0 0 0 0 0 0 0 7380 4578 6742 61784;61785;61786;61787 48906;48907;48908 48908 3 DGTTDVTRTMHFGTPTAYEK Oxidation (M) 2243.0165 0.016461285 4578 Q9NQW7 XPNPEP1 Xaa-Pro aminopeptidase 1 yes yes 0 1 1 By MS/MS 2 0 2 2 51.406 47.485 3;4 4.6872E-06 59758 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 70.414 62.874 29852000 0 0 29852000 0 0 0 0 0 0 0 0 0 0 0 0 7381 4578 6742 61788;61789 48909;48910 48910 5981 0 DGTTHQTSLELFMYLNEVAGK Oxidation (M) 2369.1209 0.12092636 737 P00966 ASS1 Argininosuccinate synthase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 6 2 3 4 1 97.536 92.566 2;3 3.6611E-82 116054 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 147.51 131.96 660330000 252780000 396320000 11230000 0 0 0 0 0 0 0 0 0 0 0 0 7382 737 6743 61790;61791;61792;61793;61794;61795;61796;61797 48911;48912;48913;48914;48915;48916;48917;48918;48919 48912 899 9 DGTTHQTSLELFMYLNEVAGK Unmodified 2353.126 0.12601173 737 P00966 ASS1 Argininosuccinate synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 2 3 1 98.075 93.596 3 1.2221E-47 116176 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.02 125.36 651510000 360520000 285790000 5204000 0 0 0 0 0 0 0 0 0 0 0 0 7383 737 6743 61798;61799;61800;61801;61802;61803 48920;48921;48922;48923;48924;48925;48926 48920 7 DGTVGELLK Unmodified 930.50221 0.50221163 1654 P51530 DNA2 DNA replication ATP-dependent helicase/nuclease DNA2;DNA replication nuclease DNA2;DNA replication ATP-dependent helicase DNA2 yes yes 0 0 0 By MS/MS 2 0 1 1 58.876 53.033 2 0.036996 68335 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.582 24.449 11897000 0 11897000 0 0 0 0 0 0 0 0 0 0 0 0 0 7384 1654 6744 61804 48927 48927 1 DGTVLCELINALYPEGQAPVK Unmodified 2286.1566 0.15658358 1391 P37802 TAGLN2 Transgelin-2 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 4 2 4 2 101.31 97.787 2;3 1.0521E-71 120884 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 141.37 127.34 275560000 0 272390000 3170500 0 0 0 0 0 0 0 0 0 0 0 0 7385 1391 6745 61805;61806;61807;61808;61809;61810 48928;48929;48930;48931;48932;48933;48934;48935;48936 48931 9 DGTVTAGNASGVADGAGAVIIASEDAVK Unmodified 2515.2402 0.24018987 1465 P42765 ACAA2 3-ketoacyl-CoA thiolase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2.67 0.471 1 2 2 1 87.927 82.949 3 2.636E-07 104932 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.391 44.302 16258000 12739000 3518500 0 0 0 0 0 0 0 0 0 0 0 0 0 7386 1465 6746 61811;61812;61813 48937;48938;48939 48938 3 DGTVTAGNASGVADGAGAVIIASEDAVKK Unmodified 2643.3352 0.33515289 1465 P42765 ACAA2 3-ketoacyl-CoA thiolase, mitochondrial yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 85.648 81.644 3 7.1857E-08 97781 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 53.679 46.909 19830000 0 19830000 0 0 0 0 0 0 0 0 0 0 0 0 0 7387 1465 6747 61814;61815 48940;48941 48941 2 DGTYAVTYIPDK Unmodified 1341.6452 0.64524705 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.58 1 2 2 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 65.973 65.115 2 0.00022953 70937 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.862 68.654 308960000 512480 141290000 0 10224000 5096700 11360000 7805200 10227000 5550700 12807000 24682000 19176000 9579500 12632000 38019000 7388 487 6748 61816;61817;61818;61819;61820;61821;61822;61823;61824;61825;61826;61827;61828;61829;61830;61831;61832 48942;48943;48944;48945;48946;48947;48948;48949;48950;48951;48952;48953;48954;48955;48956;48957 48947 16 DGVADVSIEDSVISLSGDHCIIGR Unmodified 2513.2068 0.20678125 725 P00441 SOD1 Superoxide dismutase [Cu-Zn] yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.29 0.452 5 2 4 2 1 93.376 87.874 2;3 1.3833E-185 111555 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 280.7 255.77 513040000 432060000 74828000 6158600 0 0 0 0 0 0 0 0 0 0 0 0 7389 725 6749 61833;61834;61835;61836;61837;61838;61839 48958;48959;48960;48961;48962;48963 48962 6 DGVADVSIEDSVISLSGDHCIIGRTLVVHEK Unmodified 3319.6718 0.67181951 725 P00441 SOD1 Superoxide dismutase [Cu-Zn] yes yes 0 0 1 By MS/MS By MS/MS 2.25 0.433 3 1 3 1 94.327 88.167 3;4;5 2.4853E-13 112013 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.027 61.022 256090000 234450000 21647000 0 0 0 0 0 0 0 0 0 0 0 0 0 7390 725 6750 61840;61841;61842;61843 48964;48965;48966;48967;48968 48968 5 DGVAVITLPLGGSIK Unmodified 1438.8395 0.83953018 3502 Q8TDJ6 DMXL2 DmX-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 90.212 90.348 2 0.0012694 105110 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.019 48.795 14646000 0 0 0 0 0 1637500 1262300 0 1342400 2123700 1607500 2586400 0 1373000 2713600 7391 3502 6751 61844;61845;61846;61847;61848;61849;61850;61851 48969;48970;48971;48972;48973 48973 5 DGVCGPPPSK Unmodified 1012.4648 0.46478027 2168 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 15.848 15.003 2 0.0016398 15095 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 104.2 92.432 125390000 13786000 13142000 757360 7581100 7113800 13068000 8970500 8739500 0 12035000 0 23174000 17024000 0 0 7392 2168 6752 61852;61853;61854;61855;61856;61857;61858;61859;61860;61861;61862 48974;48975;48976;48977;48978 48977 3 DGVFLYFEDNAGVIVNNK Unmodified 2012.9844 0.98435652 1913 P62829 RPL23 60S ribosomal protein L23 yes yes 0 0 0 By MS/MS By MS/MS 2.6 0.49 2 3 4 1 95.748 90.443 2;3 4.5098E-36 114120 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 168.02 154.61 61646000 58355000 3290800 0 0 0 0 0 0 0 0 0 0 0 0 0 7393 1913 6753 61863;61864;61865;61866;61867 48979;48980;48981;48982;48983 48981 4 DGVFSALK Unmodified 835.44397 0.44396847 2955 Q6PIJ6 FBXO38 F-box only protein 38 yes yes 0 0 0 By MS/MS 2 0 1 1 67.112 61.196 2 0.040344 78314 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.525 35.419 24918000 0 24918000 0 0 0 0 0 0 0 0 0 0 0 0 0 7394 2955 6754 61868 48984 48984 1 DGVIEASINHEK Unmodified 1310.6466 0.64664404 308 O43242 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 38.197 38.474 2 0.0028465 42064 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 62.005 44.141 46420000 0 0 0 0 5162500 5557800 0 0 0 6553500 9808100 13141000 0 0 6196800 7395 308 6755 61869;61870;61871;61872;61873;61874 48985;48986;48987 48987 2 DGVLEEQIER Unmodified 1186.583 0.58298115 2170 Q09161 NCBP1 Nuclear cap-binding protein subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 51.559 51.706 2 0.0016635 57453 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 101.46 77.305 358980000 0 0 0 21886000 17896000 34349000 24168000 22791000 19875000 0 33882000 51251000 40997000 37111000 54769000 7396 2170 6756 61875;61876;61877;61878;61879;61880;61881;61882;61883;61884;61885 48988;48989;48990;48991;48992;48993;48994;48995;48996;48997;48998;48999 48990 11 DGVLEEQIERLQEK Unmodified 1684.8632 0.86317875 2170 Q09161 NCBP1 Nuclear cap-binding protein subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 2 2 1 82.438 77.077 2;3 2.548E-17 98499 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 137.62 114.62 347920000 222110000 121840000 3974300 0 0 0 0 0 0 0 0 0 0 0 0 7397 2170 6757 61886;61887;61888;61889;61890 49000;49001;49002;49003;49004 49003 4 DGVLQQPVR Unmodified 1010.5509 0.55089316 2882 Q6IA86 ELP2 Elongator complex protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 2 1 1 1 2 1 1 1 37.21 37.429 2 0.0049227 41009 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 85.265 48.171 144980000 0 0 0 6994000 7514500 12974000 8836200 9966100 6749700 12267000 13736000 21851000 12516000 13646000 17933000 7398 2882 6758 61891;61892;61893;61894;61895;61896;61897;61898;61899;61900;61901;61902;61903;61904 49005;49006;49007;49008;49009;49010;49011 49011 7 DGVLQQPVRLLSASMDK Unmodified 1855.9826 0.98258238 2882 Q6IA86 ELP2 Elongator complex protein 2 yes yes 0 0 1 By MS/MS 2 0 1 1 89.962 81.831 3 0.0013035 106372 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.595 46.937 5929400 5929400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7399 2882 6759 61905 49012 49012 1 DGVLTLANNVTPAK Unmodified 1411.7671 0.76709352 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.39 3.7 5 1 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 74.387 72.816 2 9.5163E-44 86969 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 167.6 127.59 2566400000 31920000 1691800000 5900300 41651000 65005000 48483000 46859000 46240000 42582000 68706000 103170000 103150000 75389000 80633000 114880000 7400 1226 6760 61906;61907;61908;61909;61910;61911;61912;61913;61914;61915;61916;61917;61918;61919;61920;61921;61922;61923 49013;49014;49015;49016;49017;49018;49019;49020;49021;49022;49023;49024;49025;49026;49027;49028 49019 16 DGVLVDEFGLPQIPAS Unmodified 1655.8407 0.8406524 4784 Q9NZZ3 CHMP5 Charged multivesicular body protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.69 3.07 1 1 11 1 1 1 1 1 1 1 1 1 1 1 1 1 97.769 97.897 2 2.0009E-07 91652 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 105.52 93.464 339970000 102120000 123370000 0 0 5567100 2756900 3616700 4576500 4377900 15368000 16658000 18935000 2462000 10265000 29894000 7401 4784 6761 61924;61925;61926;61927;61928;61929;61930;61931;61932;61933;61934;61935;61936 49029;49030;49031;49032;49033;49034;49035;49036;49037 49034 9 DGVPEGAQLQGPVHR Unmodified 1558.7852 0.7852032 1044 P16989 YBX3 Y-box-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 45.275 45.444 2;3 1.347E-20 51609 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 107.14 95.163 1672300000 0 0 0 73965000 106180000 125850000 94377000 76926000 94391000 161710000 199050000 195450000 188430000 168100000 187850000 7402 1044 6762 61937;61938;61939;61940;61941;61942;61943;61944;61945;61946;61947;61948;61949;61950;61951;61952;61953;61954;61955;61956;61957;61958;61959;61960 49038;49039;49040;49041;49042;49043;49044;49045;49046;49047;49048;49049;49050;49051;49052;49053;49054;49055;49056;49057;49058;49059;49060;49061;49062;49063 49063 22 DGVPEGAQLQGPVHRNPTYRPR Unmodified 2443.2469 0.24688742 1044 P16989 YBX3 Y-box-binding protein 3 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 2 2 1 1 2 2 2 44.158 44.513 4;5 9.1647E-43 48647 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.45 99.741 349810000 0 0 0 0 0 33457000 0 0 36332000 0 17247000 60653000 42207000 57212000 102700000 7403 1044 6763 61961;61962;61963;61964;61965;61966;61967;61968;61969;61970;61971;61972 49064;49065;49066;49067;49068;49069;49070;49071;49072;49073;49074;49075;49076;49077 49065 13 DGVPGLNIEELIEK Unmodified 1524.8035 0.80353861 3489 Q8TCG1 KIAA1524 Protein CIP2A yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 2 2 2 2 96.478 91.562 2 0.00082064 114801 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.345 78.079 202150000 50770000 151380000 0 0 0 0 0 0 0 0 0 0 0 0 0 7404 3489 6764 61973;61974;61975;61976 49078;49079;49080 49080 3 DGVSAAVISAELASFLATK Unmodified 1848.9833 0.98329389 3844 Q96G03 PGM2 Phosphoglucomutase-2 yes yes 0 0 0 By MS/MS 2 0 1 1 103.18 98.455 2 5.4893E-15 121598 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 137.8 124.92 11285000 0 11285000 0 0 0 0 0 0 0 0 0 0 0 0 0 7405 3844 6765 61977 49081 49081 1 DGVSSSFSSSSWK Unmodified 1359.5943 0.59427411 2864 Q6AI08 HEATR6 HEAT repeat-containing protein 6 yes yes 0 0 0 By MS/MS 2 0 1 1 59.205 53.362 2 0.0061892 68756 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.906 53.755 15893000 0 15893000 0 0 0 0 0 0 0 0 0 0 0 0 0 7406 2864 6766 61978 49082;49083 49083 2 DGVTVAVISGEALGIK Unmodified 1527.8508 0.85082315 172 O00625 PIR Pirin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 2 2 2 91.516 87.111 2 5.5886E-23 89007 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 120.87 88.235 214900000 99025000 88044000 27832000 0 0 0 0 0 0 0 0 0 0 0 0 7407 172 6767 61979;61980;61981;61982;61983;61984 49084;49085;49086;49087;49088;49089;49090;49091 49086 8 DGVVEITGK Unmodified 916.48656 0.48656157 786 P04792 HSPB1 Heat shock protein beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.71 3 5 2 24 5 4 1 2 2 2 2 2 2 2 2 2 2 2 2 44.246 43.616 1;2 2.7207E-05 41103 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 133.23 63.41 15090000000 802530000 3622300000 33322000 799420000 473140000 621940000 775420000 651040000 596670000 973050000 1011900000 1107400000 797350000 775000000 2049800000 7408 786 6768 61985;61986;61987;61988;61989;61990;61991;61992;61993;61994;61995;61996;61997;61998;61999;62000;62001;62002;62003;62004;62005;62006;62007;62008;62009;62010;62011;62012;62013;62014;62015;62016;62017;62018 49092;49093;49094;49095;49096;49097;49098;49099;49100;49101;49102;49103;49104;49105;49106;49107;49108;49109;49110;49111;49112;49113;49114;49115;49116;49117;49118;49119;49120 49117 24 DGVVEITGKHEER Unmodified 1467.7318 0.73177065 786 P04792 HSPB1 Heat shock protein beta-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.412 26.612 3 0.0050976 28399 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 45.434 35.095 210260000 0 0 0 24849000 14873000 3710700 32849000 29053000 8373000 13863000 19789000 21406000 12717000 11539000 17234000 7409 786 6769 62019;62020;62021;62022;62023;62024;62025;62026;62027;62028;62029;62030 49121;49122;49123;49124;49125;49126;49127;49128;49129;49130;49131 49124 11 DGVVFGVEK Unmodified 948.49165 0.49164694 1195 P25788 PSMA3 Proteasome subunit alpha type-3 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 57.74 51.439 2 0.015194 66658 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.296 52.147 1771900000 139460000 1632400000 0 0 0 0 0 0 0 0 0 0 0 0 0 7410 1195 6770 62031;62032;62033 49132;49133;49134;49135 49133 4 DGVVLFK Unmodified 776.44324 0.44324019 838 P07237 P4HB Protein disulfide-isomerase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.24 2.35 2 19 1 1 2 2 2 2 2 2 2 1 1 1 1 1 61.595 61.052 2 0.023879 68814 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 94.163 57.607 1204000000 295030000 0 111890000 39797000 33889000 34138000 38041000 41827000 25964000 53993000 124940000 91429000 29876000 79006000 204160000 7411 838 6771 62034;62035;62036;62037;62038;62039;62040;62041;62042;62043;62044;62045;62046;62047;62048;62049;62050;62051;62052;62053;62054 49136;49137;49138;49139;49140;49141;49142 49138 7 DGVVTIGCVGFPNVGK Unmodified 1617.8185 0.81847717 1382 P36915 GNL1 Guanine nucleotide-binding protein-like 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 86.798 82.783 2 0.00069672 99248 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 92.866 83.678 98993000 0 98993000 0 0 0 0 0 0 0 0 0 0 0 0 0 7412 1382 6772 62055;62056 49143;49144;49145 49145 3 DGVWNLQNEVTK Unmodified 1401.6888 0.6888432 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 73.212 72.508 2 7.739E-07 88877 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.71 109.47 462600000 0 249770000 1664100 8836800 9514500 13720000 9640600 14754000 14118000 21771000 20544000 30409000 16526000 20095000 31243000 7413 2930 6773 62057;62058;62059;62060;62061;62062;62063;62064;62065;62066;62067;62068;62069;62070;62071 49146;49147;49148;49149;49150;49151;49152;49153;49154;49155;49156;49157;49158;49159;49160;49161;49162;49163 49151 18 DGVYVLDLAAK Unmodified 1162.6234 0.6233894 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.12 2.42 2 2 30 1 2 1 3 3 3 3 3 3 3 3 3 1 1 1 81.807 81.433 1;2 9.0566E-16 93423 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 161.63 115.51 7883800000 4122200 540960000 42433000 120890000 375680000 343080000 1312200000 2083400000 1476800000 365870000 420890000 647290000 15758000 32823000 101640000 7414 1714 6774 62072;62073;62074;62075;62076;62077;62078;62079;62080;62081;62082;62083;62084;62085;62086;62087;62088;62089;62090;62091;62092;62093;62094;62095;62096;62097;62098;62099;62100;62101;62102;62103;62104;62105 49164;49165;49166;49167;49168;49169;49170;49171;49172;49173;49174;49175;49176;49177;49178;49179;49180;49181;49182;49183 49178 17 DGWGGYGSDK Unmodified 1040.4199 0.41993856 2532;2377 Q15424;Q14151 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 33.822 33.933 2 0.045692 36265 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 38.276 29.035 45303000 0 0 0 3970100 4242100 4361200 5075200 4178400 3556200 0 7632100 0 0 5023900 7263500 7415 2532;2377 6775 62106;62107;62108;62109;62110;62111;62112;62113;62114 49184 49184 1 DGWPAMGIHGDK Oxidation (M) 1298.5714 0.5713706 1062 P17844 DDX5 Probable ATP-dependent RNA helicase DDX5 yes yes 0 1 0 By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 10 0 8 1 1 1 1 1 1 1 1 38.338 38.531 2 0.0055301 42573 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 48.981 40.449 38191000 0 0 0 3354900 2762900 0 4888700 0 0 3945300 5775400 6531800 6439000 0 4493500 7416 1062 6776 62115;62116;62117;62118;62119;62120;62121;62122 49185 49185 1486 1 DGYADIVDVLNSPLEGPDQK Unmodified 2144.0273 0.027343548 1593 Q86TX2;P49753 ACOT1;ACOT2 Acyl-coenzyme A thioesterase 1;Acyl-coenzyme A thioesterase 2, mitochondrial yes no 0 0 0 By MS/MS 2.33 0.471 2 1 3 95.601 91.302 2;3 2.3256E-138 112997 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 209.21 193.45 55687000 0 55687000 0 0 0 0 0 0 0 0 0 0 0 0 0 7417 1593 6777 62123;62124;62125 49186;49187;49188;49189;49190;49191 49186 6 DGYGGSRDSYSSSR Unmodified 1492.6179 0.6178631 1395 P38159;Q96E39 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 13.832 13.987 3 0.039339 12895 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 21.254 17.102 30403000 0 0 0 2802400 2475500 1666500 2206900 2383900 1956600 2934700 3396000 3225200 2730100 0 4624600 7418 1395 6778 62126;62127;62128;62129;62130;62131;62132;62133;62134;62135;62136 49192 49192 1 DGYGSPHHTPPYGPR Unmodified 1636.7383 0.73825301 3474 Q8TAP9 MPLKIP M-phase-specific PLK1-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS 10 0 5 1 1 1 1 1 27.603 28.074 3 0.03235 29904 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 35.891 31.261 26960000 0 0 0 0 0 0 0 0 0 3640100 7485700 5332900 4433400 0 6067600 7419 3474 6779 62137;62138;62139;62140;62141 49193 49193 0 DGYISNGELFQVLK Unmodified 1581.8039 0.80387296 1939 P63098;Q96LZ3 PPP3R1;PPP3R2 Calcineurin subunit B type 1;Calcineurin subunit B type 2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 88.931 89.075 2 0.020564 103396 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 35.414 20.442 12753000 0 0 0 0 0 0 0 0 0 0 2416800 1750500 0 1576700 7008900 7420 1939 6780 62142;62143;62144;62145 49194 49194 1 DGYNYTLSK Unmodified 1059.4873 0.48728985 1314 P31949 S100A11 Protein S100-A11;Protein S100-A11, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.57 3.98 2 5 2 12 4 4 1 1 1 1 1 1 1 1 1 1 1 1 1 46.837 45.447 2 0.0046316 43175 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 86.205 72.209 5155100000 397740000 2487900000 14282000 175390000 88247000 99005000 105470000 93920000 85706000 167910000 278110000 248510000 133490000 196890000 582490000 7421 1314 6781 62146;62147;62148;62149;62150;62151;62152;62153;62154;62155;62156;62157;62158;62159;62160;62161;62162;62163;62164;62165;62166 49195;49196;49197;49198;49199;49200;49201;49202;49203;49204;49205;49206;49207;49208;49209;49210;49211;49212 49206 14 DGYQQNFK Unmodified 998.44576 0.44575938 2407 Q14444 CAPRIN1 Caprin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.373 23.577 2 0.0050749 24144 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 108.24 92.084 1099000000 0 0 0 87610000 77895000 56403000 87409000 60313000 59678000 119830000 118590000 141860000 103920000 77372000 108100000 7422 2407 6782 62167;62168;62169;62170;62171;62172;62173;62174;62175;62176;62177;62178 49213;49214;49215;49216;49217;49218;49219;49220;49221;49222;49223;49224;49225 49223 12 DGYRYILAEPDPHAPDPEK Unmodified 2182.0331 0.033097627 4846 Q9UBL3 ASH2L Set1/Ash2 histone methyltransferase complex subunit ASH2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 4 2 2 71.572 65.634 3;4 7.9803E-06 86818 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.11 63.826 32714000 21290000 0 11424000 0 0 0 0 0 0 0 0 0 0 0 0 7423 4846 6783 62179;62180;62181;62182 49226;49227;49228;49229 49227 4 DGYVEVSGK Unmodified 952.45018 0.45017606 4948 Q9UJY1 HSPB8 Heat shock protein beta-8 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.159 26.36 2 0.026691 26850 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.715 34.083 96005000 0 0 0 5268300 5151700 7926100 6684300 5180400 4865900 8963000 8917600 12505000 8210300 8274300 14058000 7424 4948 6784 62183;62184;62185;62186;62187;62188;62189;62190;62191;62192;62193;62194 49230;49231;49232 49230 3 DHAATTAGAASLAGGHHR Unmodified 1699.8139 0.81387757 1241 P29083 GTF2E1 General transcription factor IIE subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 2 1 2 1 2 2 1 1 2 2 17.86 18.103 3;4 0.00018727 16684 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.851 43.733 188370000 0 0 0 9876000 0 16402000 2595400 12865000 1977600 18825000 31701000 37407000 6929300 12894000 36898000 7425 1241 6785 62195;62196;62197;62198;62199;62200;62201;62202;62203;62204;62205;62206;62207;62208;62209;62210;62211 49233;49234;49235;49236;49237;49238;49239;49240;49241;49242;49243;49244 49236 11 DHAEEGTSEDGTKPDEK Unmodified 1843.7708 0.77079451 4968 Q9UKJ3 GPATCH8 G patch domain-containing protein 8 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.5286 6.6528 3 6.9045E-111 4741 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 192.96 176.85 199910000 0 0 0 7447200 10861000 11044000 12596000 15192000 14224000 19415000 21107000 24460000 23153000 17996000 22415000 7426 4968 6786 62212;62213;62214;62215;62216;62217;62218;62219;62220;62221;62222;62223 49245;49246;49247;49248;49249;49250;49251;49252;49253;49254;49255;49256 49254 12 DHAISLSEPR Unmodified 1123.5622 0.56218613 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 35.015 35.483 2 0.0060298 38682 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 66.568 48.343 32978000 0 0 0 0 0 0 0 0 0 0 32978000 0 0 0 0 7427 5216 6787 62224;62225;62226;62227;62228;62229;62230 49257;49258;49259;49260;49261;49262;49263 49259 7 DHASIQMNVAEVDK Oxidation (M) 1571.725 0.72497071 1948 P63220 RPS21 40S ribosomal protein S21 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.8 3.92 6 9 1 3 2 1 1 2 2 2 1 37.354 35.941 2;3 6.7778E-34 45905 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 154.1 135.59 1053400000 11491000 934060000 25600000 0 0 0 1584600 5039800 0 0 22134000 24908000 0 17108000 11461000 7428 1948 6788 62231;62232;62233;62234;62235;62236;62237;62238;62239;62240;62241;62242;62243;62244;62245 49264;49265;49266;49267;49268;49269;49270;49271;49272;49273;49274 49264 3126 10 DHASIQMNVAEVDK Unmodified 1555.7301 0.73005609 1948 P63220 RPS21 40S ribosomal protein S21 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 5 3.71 8 3 6 4 6 1 1 1 1 1 1 1 54.857 51.651 2;3 3.423E-105 66523 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 294.44 267.13 757100000 51255000 596230000 5637500 0 2145000 0 2890800 0 0 0 22302000 13461000 0 20430000 42749000 7429 1948 6788 62246;62247;62248;62249;62250;62251;62252;62253;62254;62255;62256;62257;62258;62259;62260;62261;62262 49275;49276;49277;49278;49279;49280;49281;49282;49283;49284;49285;49286;49287;49288;49289;49290 49280 12 DHAVFTR Unmodified 844.41915 0.4191507 1303 P31689 DNAJA1 DnaJ homolog subfamily A member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.5 16.679 2 0.018925 15361 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 111.04 93.474 412630000 0 0 0 21168000 18061000 25035000 25901000 18768000 15085000 36220000 44327000 53666000 32535000 45264000 76598000 7430 1303 6789 62263;62264;62265;62266;62267;62268;62269;62270;62271;62272;62273;62274 49291;49292;49293;49294;49295;49296;49297;49298;49299;49300;49301 49293 11 DHDTFLAVR Unmodified 1072.5302 0.53015772 2208 Q12907 LMAN2 Vesicular integral-membrane protein VIP36 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching 10 0 6 1 1 1 1 1 1 48.125 48.453 2 0.020914 54726 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 52.716 36.513 36118000 0 0 0 0 0 5043500 0 5246300 0 0 4628200 7918300 7111600 6169800 0 7431 2208 6790 62275;62276;62277;62278;62279;62280 49302 49302 1 DHDVMLFLK Unmodified 1116.5638 0.56376603 3702 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 83.45 75.319 2 0.0081041 98406 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 91.064 73.079 10863000 10863000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7432 3702 6791 62281;62282 49303;49304 49304 2 DHDVMLFLK Oxidation (M) 1132.5587 0.55868065 3702 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 70.119 64.128 2 0.006797 85575 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 91.853 43.292 19013000 12358000 0 6655500 0 0 0 0 0 0 0 0 0 0 0 0 7433 3702 6791 62283;62284 49305;49306 49305 5274 2 DHEDYDPQTVR Unmodified 1373.5848 0.58477206 3701 Q93008 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 23.965 24.46 2 0.0097068 25805 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 82.287 75.618 9945300 0 0 0 0 0 0 0 0 0 0 1849700 0 0 3595800 4499800 7434 3701 6792 62285;62286;62287;62288;62289 49307;49308;49309 49307 3 DHEEWICTINNISK Unmodified 1757.8043 0.80428367 4965 Q9UKG1 APPL1 DCC-interacting protein 13-alpha yes yes 0 0 0 By MS/MS 2 0 1 1 78.429 75.801 3 0.013051 92136 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 39.005 27.734 2799300 0 0 2799300 0 0 0 0 0 0 0 0 0 0 0 0 7435 4965 6793 62290 49310 49310 1 DHEEYNIGVLDIYGFEIFQK Unmodified 2428.1587 0.15869207 2215 Q12965 MYO1E Unconventional myosin-Ie yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 99.257 93.429 3 3.0255E-18 118008 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 105.38 99.342 130930000 130930000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7436 2215 6794 62291;62292 49311;49312 49312 2 DHEISYAK Unmodified 961.45051 0.45051041 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 16.501 13.611 2 0.011882 17599 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.9 69.089 81178000 0 77345000 3833300 0 0 0 0 0 0 0 0 0 0 0 0 7437 2775 6795 62293;62294 49313;49314 49313 2 DHENIVIAK Unmodified 1037.5506 0.55055881 838 P07237 P4HB Protein disulfide-isomerase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 4 2 12 1 4 1 1 1 1 1 1 1 1 1 1 1 1 1 30.172 28.747 2 2.0288E-28 29452 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 180.87 143.71 2412400000 168570000 1395000000 97447000 31693000 24625000 22737000 25954000 23575000 25405000 36755000 132090000 95810000 35241000 72959000 224520000 7438 838 6796 62295;62296;62297;62298;62299;62300;62301;62302;62303;62304;62305;62306;62307;62308;62309;62310;62311;62312 49315;49316;49317;49318;49319;49320;49321;49322;49323;49324;49325;49326;49327;49328;49329;49330;49331;49332;49333;49334 49320 20 DHENRLEALQQAQEIDK Unmodified 2035.9923 0.99229545 410 O60524 NEMF Nuclear export mediator factor NEMF yes yes 0 0 1 By MS/MS 2 0 2 2 63.89 55.611 3;4 0.0052937 74910 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 37.687 14.461 15743000 15743000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7439 410 6797 62313;62314 49335;49336 49335 2 DHEVALIFPGPQSISIK Unmodified 1849.9938 0.993799 3344 Q8N5C7 DTWD1 DTW domain-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 93.097 84.967 3 0.01059 110193 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 34.498 23.443 3901800 3901800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7440 3344 6798 62315 49337 49337 1 DHFEEAMR Unmodified 1033.4287 0.42872911 1755 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 24.158 24.368 2 0.0056222 25258 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 106.14 101.78 159390000 0 0 0 8548100 3496000 7153400 5921200 7182200 0 8296000 21430000 26235000 6846400 13207000 51075000 7441 1755 6799 62316;62317;62318;62319;62320;62321;62322;62323;62324;62325;62326 49338;49339;49340;49341;49342 49340 5 DHFEEAMR Oxidation (M) 1049.4236 0.42364373 1755 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 10.989 11.435 2 0.016662 9966 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 58.815 47.746 11702000 0 0 0 0 0 0 0 0 0 0 11702000 0 0 0 0 7442 1755 6799 62327;62328 49343;49344;49345 49343 2866 3 DHFGFNPEK Unmodified 1089.488 0.48795855 5050 Q9UPN6 SCAF8 Protein SCAF8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.344 40.586 2 1.6388E-08 45449 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 158.87 132.98 168670000 0 0 0 0 6302400 11786000 12198000 12241000 10881000 12747000 21113000 21932000 19882000 14112000 25474000 7443 5050 6800 62329;62330;62331;62332;62333;62334;62335;62336;62337;62338;62339;62340 49346;49347;49348;49349;49350;49351;49352;49353;49354;49355;49356;49357 49346 12 DHFGLEGDEESTMLEDSVSPK Oxidation (M) 2336.9955 0.99545107 5187 Q9Y490 TLN1 Talin-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 71.961 70.508 3 3.1798E-59 84614 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 136.04 131.51 365720000 93304000 176320000 15953000 0 3440000 17834000 0 3394300 5862900 0 8661700 11758000 7266300 6758200 15164000 7444 5187 6801 62341;62342;62343;62344;62345;62346;62347;62348;62349;62350;62351;62352;62353 49358;49359;49360;49361;49362;49363;49364;49365;49366;49367;49368;49369;49370;49371;49372 49363 6561 14 DHFGLEGDEESTMLEDSVSPK Unmodified 2321.0005 0.0005364496 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 5.25 3.7 3 2 3 2 2 1 1 1 1 79.479 76.731 3 1.4579E-72 95252 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 144.27 129.81 324370000 118490000 177450000 12480000 0 0 0 2034600 0 0 4116100 0 0 0 0 9799900 7445 5187 6801 62354;62355;62356;62357;62358;62359;62360;62361 49373;49374;49375;49376;49377;49378 49373 6 DHFGLEGDEESTMLEDSVSPKK Oxidation (M) 2465.0904 0.090414089 5187 Q9Y490 TLN1 Talin-1 yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 70.239 64.258 3 9.5163E-11 84845 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.027 72.223 17886000 15675000 0 2210600 0 0 0 0 0 0 0 0 0 0 0 0 7446 5187 6802 62362;62363 49379;49380 49379 6561 2 DHFGLEGDEESTMLEDSVSPKK Unmodified 2449.0955 0.095499467 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 1 By MS/MS 2 0 1 1 79.127 70.997 3 4.26E-85 93339 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 150.69 145.93 23747000 23747000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7447 5187 6802 62364 49381;49382 49382 2 DHFGRPPVDIR Unmodified 1307.6735 0.67346791 5050 Q9UPN6 SCAF8 Protein SCAF8 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 45.221 45.55 3 0.0051281 51059 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 53.569 36.543 79600000 0 0 0 0 0 10675000 3462300 5037800 6967100 0 6239100 12058000 10121000 11011000 14029000 7448 5050 6803 62365;62366;62367;62368;62369;62370;62371;62372;62373 49383;49384;49385;49386;49387 49385 5 DHGFEVASTSPEDESPGSNPEPDATPFQEGLR Unmodified 3398.4811 0.48110144 1763 P55211 CASP9 Caspase-9;Caspase-9 subunit p35;Caspase-9 subunit p10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 77.888 78.035 3 1.5948E-98 89756 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 123.89 121.48 76715000 0 0 0 0 0 10599000 3365500 6175500 4931300 7626400 6976800 9560700 5005200 7947300 14527000 7449 1763 6804 62374;62375;62376;62377;62378;62379;62380;62381;62382;62383 49388;49389;49390;49391;49392;49393;49394;49395;49396 49391 9 DHGGALGPEEFK Unmodified 1255.5833 0.5833155 356 O43707 ACTN4 Alpha-actinin-4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.69 3.83 13 5 24 7 8 3 2 2 2 2 2 2 2 2 2 2 2 2 43.553 41.687 2;3 9.9491E-27 54712 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 211.68 183.46 3270100000 378770000 1371000000 249130000 51109000 24851000 84468000 46264000 38671000 27183000 77879000 168450000 178040000 62584000 136410000 375310000 7450 356 6805 62384;62385;62386;62387;62388;62389;62390;62391;62392;62393;62394;62395;62396;62397;62398;62399;62400;62401;62402;62403;62404;62405;62406;62407;62408;62409;62410;62411;62412;62413;62414;62415;62416;62417;62418;62419;62420;62421;62422;62423;62424;62425 49397;49398;49399;49400;49401;49402;49403;49404;49405;49406;49407;49408;49409;49410;49411;49412;49413;49414;49415;49416;49417;49418;49419;49420;49421;49422;49423;49424;49425;49426;49427;49428;49429;49430;49431;49432;49433;49434;49435;49436 49407 30 DHGGIFSR Unmodified 887.42496 0.42496436 2810 Q5VT52 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 25.676 25.876 2 0.02313 27527 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 60.589 12.416 221230000 0 0 0 10459000 10258000 14286000 13393000 15176000 15372000 17073000 18211000 38162000 22343000 21821000 24679000 7451 2810 6806 62426;62427;62428;62429;62430;62431;62432;62433;62434;62435;62436;62437 49437;49438 49438 2 DHGYTTLATSVTLLK Unmodified 1618.8566 0.85663681 2194 Q12824 SMARCB1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 yes yes 0 0 0 By MS/MS 2 0 2 2 84.65 76.52 2;3 8.0577E-07 99890 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.3 89.018 70490000 70490000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7452 2194 6807 62438;62439 49439;49440 49439 2 DHIMEIFSTYGK Oxidation (M) 1455.6704 0.67041595 2513 Q15287 RNPS1 RNA-binding protein with serine-rich domain 1 yes yes 0 1 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 2 1 1 68.148 68.216 2;3 0.0050957 78334 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 72.2 63.507 28327000 0 0 0 0 1128700 3992600 2284600 0 3732700 6520600 0 6286300 4381500 0 0 7453 2513 6808 62440;62441;62442;62443;62444;62445;62446;62447 49441;49442;49443 49443 4131 1 DHINDIIK Unmodified 966.51345 0.51344502 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.07 37.249 2 0.005396 41082 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 107.01 59.092 378040000 0 0 0 33528000 21517000 45879000 24471000 22188000 15708000 37671000 34101000 43053000 32870000 21973000 45083000 7454 1518 6809 62448;62449;62450;62451;62452;62453;62454;62455;62456;62457;62458;62459 49444;49445;49446;49447;49448;49449;49450;49451;49452;49453;49454;49455 49452 12 DHIPITDSPVVVQQHMLPPK Oxidation (M) 2266.178 0.17798773 533 O75694 NUP155 Nuclear pore complex protein Nup155 yes yes 0 1 0 By MS/MS By MS/MS 2 0 3 1 2 73.266 68.433 3;4 6.0781E-08 84147 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 72.819 64 31969000 16991000 0 14979000 0 0 0 0 0 0 0 0 0 0 0 0 7455 533 6810 62460;62461;62462 49456;49457;49458 49457 694 3 DHIPITDSPVVVQQHMLPPK Unmodified 2250.1831 0.1830731 533 O75694 NUP155 Nuclear pore complex protein Nup155 yes yes 0 0 0 By MS/MS By MS/MS 2 0 4 2 2 80.383 75.017 3;4 0.0011336 96809 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.663 42.137 57060000 48064000 0 8996300 0 0 0 0 0 0 0 0 0 0 0 0 7456 533 6810 62463;62464;62465;62466 49459;49460;49461;49462 49460 0 DHIPRETDMK Oxidation (M) 1256.5819 0.58193529 5094 Q9Y2A7 NCKAP1 Nck-associated protein 1 yes yes 0 1 1 By MS/MS By MS/MS 2 0 3 2 1 11.018 8.9358 3 0.010134 11427 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 62.463 31.389 45258000 12700000 0 32558000 0 0 0 0 0 0 0 0 0 0 0 0 7457 5094 6811 62467;62468;62469 49463 49463 6491 1 DHLIGPNDNDFGK Unmodified 1440.6634 0.66335673 3243 Q8IWR0 ZC3H7A Zinc finger CCCH domain-containing protein 7A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 14 1 1 1 1 1 1 2 1 1 2 2 46.822 47.054 2;3 0.0041446 51985 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 47.189 40.712 118560000 0 0 0 8178700 5599400 12192000 6461000 0 9165900 13871000 17206000 4525800 4051200 13456000 23853000 7458 3243 6812 62470;62471;62472;62473;62474;62475;62476;62477;62478;62479;62480;62481;62482;62483 49464;49465;49466;49467;49468;49469;49470;49471;49472;49473 49471 7 DHLLGVSDSGK Unmodified 1126.5619 0.56185177 5118 Q9Y2T3 GDA Guanine deaminase yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 29.974 30.559 2 0.00043368 33065 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 105.4 77.178 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7459 5118 6813 62484;62485 49474;49475 49475 2 DHLLLEQK Unmodified 994.54475 0.54474515 3629 Q92574 TSC1 Hamartin yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 38.22 34.02 2 0.0065618 42942 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 139.28 99.177 18996000 0 12780000 6216100 0 0 0 0 0 0 0 0 0 0 0 0 7460 3629 6814 62486;62487 49476;49477;49478 49477 3 DHLQGLDPGEPNK Unmodified 1418.679 0.6790068 4968 Q9UKJ3 GPATCH8 G patch domain-containing protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 1 2 2 2 2 2 2 2 2 2 2 2 35.941 36.149 2;3 0.002888 39822 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 36.107 22.781 249550000 0 0 0 12956000 12221000 17393000 18793000 16221000 16949000 21564000 19594000 31751000 23747000 24028000 34336000 7461 4968 6815 62488;62489;62490;62491;62492;62493;62494;62495;62496;62497;62498;62499;62500;62501;62502;62503;62504;62505;62506;62507;62508;62509;62510 49479;49480;49481;49482;49483;49484;49485;49486;49487;49488;49489;49490 49485 12 DHLVNTETK Unmodified 1055.5247 0.52473799 4666 Q9NVE7 PANK4 Pantothenate kinase 4 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 11.915 11.407 2 5.436E-116 10598 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 222.42 171.45 473510000 10980000 51015000 0 79415000 137730000 142540000 11827000 11053000 10123000 5054600 5918200 5629600 0 0 2224100 7462 4666 6816 62511;62512;62513;62514;62515;62516;62517;62518;62519;62520;62521;62522 49491;49492;49493;49494;49495;49496;49497;49498;49499;49500;49501 49501 11 DHLVTAYNHLFETK Unmodified 1686.8366 0.83657007 2043 Q00688 FKBP3 Peptidyl-prolyl cis-trans isomerase FKBP3 yes yes 0 0 0 By MS/MS 10 0 1 1 67.661 68.179 3 0.02768 77542 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 28.939 28.939 8403900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8403900 7463 2043 6817 62523 49502 49502 1 DHMLIPVSMSELEK Oxidation (M) 1643.7899 0.78987915 579 O94760 DDAH1 N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 5 1 2 2 81.041 76.46 3 0.00019679 99138 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.939 84.961 147050000 11569000 113330000 22146000 0 0 0 0 0 0 0 0 0 0 0 0 7464 579 6818 62524;62525;62526;62527;62528 49503;49504;49505;49506;49507 49504 735;736 4 DHMLIPVSMSELEK Unmodified 1627.795 0.79496453 579 O94760 DDAH1 N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 4 1 2 1 87.85 82.715 2;3 0.0013862 101116 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 49.929 45.038 114310000 10452000 97815000 6044300 0 0 0 0 0 0 0 0 0 0 0 0 7465 579 6818 62529;62530;62531;62532 49508;49509;49510;49511;49512 49512 4 DHMLIPVSMSELEK 2 Oxidation (M) 1659.7848 0.78479378 579 O94760 DDAH1 N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 yes yes 0 2 0 By MS/MS 2 0 1 1 68.203 64.48 2 0.034322 79899 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 43.512 33.508 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7466 579 6818 62533 49513 49513 735;736 1 DHMREAGDVCYADVQK Oxidation (M) 1908.8094 0.8094454 2258 Q13242 SRSF9 Serine/arginine-rich splicing factor 9 yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 33.66 28.851 3 0.011975 36754 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 51.727 49.253 10787000 2797500 0 7989600 0 0 0 0 0 0 0 0 0 0 0 0 7467 2258 6819 62534;62535 49514 49514 3678 0 DHNEEEGEETGLRDEK Unmodified 1885.7926 0.79259258 2661 Q32MZ4 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 16.644 16.846 3 2.6969E-15 15180 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 102.64 100.57 29916000 0 0 0 849860 1162200 2360900 0 1322500 0 1430100 3790300 5242200 2368300 3322900 8066400 7468 2661 6820 62536;62537;62538;62539;62540;62541;62542;62543;62544;62545 49515;49516;49517;49518;49519 49518 5 DHNIRAQEPESGLSEETQVK Unmodified 2266.0826 0.082567016 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.12 0.331 7 1 2 3 3 46.375 41.057 3;4 2.8233E-92 51676 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 165.66 151.2 1566600000 183230000 203250000 1180200000 0 0 0 0 0 0 0 0 0 0 0 0 7469 1986 6821 62546;62547;62548;62549;62550;62551;62552;62553 49520;49521;49522;49523;49524;49525;49526;49527;49528;49529;49530 49529 10 DHPALNYNIVSGPPSHK Unmodified 1844.9169 0.91694566 269 O15269 SPTLC1 Serine palmitoyltransferase 1 yes yes 0 0 0 By MS/MS 2 0 1 1 65.456 57.167 3 0.00075707 76846 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.936 47.597 7412000 7412000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7470 269 6822 62554 49531 49531 1 DHPDVAK Unmodified 780.37662 0.37661719 2143 Q07866 KLC1 Kinesin light chain 1 yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 5.6319 2.9092 2 0.023131 4556 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.77 100.1 593190000 0 588130000 5061600 0 0 0 0 0 0 0 0 0 0 0 0 7471 2143 6823 62555;62556 49532 49532 1 DHPFGFVAVPTK Unmodified 1313.6768 0.67682195 1952 P63279 UBE2I SUMO-conjugating enzyme UBC9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.37 3.91 1 14 5 23 10 6 4 2 2 1 2 2 2 2 2 2 2 2 2 75.839 74.012 2;3 1.983E-26 82694 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 167.12 148.14 7972300000 4320300000 1348900000 1312300000 42627000 33224000 34065000 62687000 56078000 64623000 68853000 108390000 102540000 62136000 93389000 262110000 7472 1952 6824 62557;62558;62559;62560;62561;62562;62563;62564;62565;62566;62567;62568;62569;62570;62571;62572;62573;62574;62575;62576;62577;62578;62579;62580;62581;62582;62583;62584;62585;62586;62587;62588;62589;62590;62591;62592;62593;62594;62595;62596;62597;62598;62599 49533;49534;49535;49536;49537;49538;49539;49540;49541;49542;49543;49544;49545;49546;49547;49548;49549;49550;49551;49552;49553;49554;49555;49556;49557;49558;49559;49560;49561;49562;49563;49564;49565;49566;49567;49568;49569;49570;49571;49572;49573 49565 38 DHPQQQPGMLSR Oxidation (M) 1408.6517 0.65174619 3546 Q8WUH6 TMEM263 Transmembrane protein 263 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 33 3 3 3 3 3 3 2 3 3 2 3 2 14.871 15.031 2;3 8.9105E-15 14206 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 155.11 140.91 4510800000 0 0 0 359310000 324500000 336500000 475950000 275820000 276260000 165620000 827650000 611980000 179700000 379500000 298040000 7473 3546 6825 62600;62601;62602;62603;62604;62605;62606;62607;62608;62609;62610;62611;62612;62613;62614;62615;62616;62617;62618;62619;62620;62621;62622;62623;62624;62625;62626;62627;62628;62629;62630;62631;62632 49574;49575;49576;49577;49578;49579;49580;49581;49582;49583;49584;49585;49586;49587;49588;49589;49590;49591;49592;49593;49594 49589 5039 13 DHPQQQPGMLSR Unmodified 1392.6568 0.65683157 3546 Q8WUH6 TMEM263 Transmembrane protein 263 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 25.183 25.386 2;3 3.0668E-180 26968 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 236.06 218.24 3212700000 0 0 0 248580000 242890000 287350000 246730000 175440000 168900000 260030000 283870000 442280000 136270000 196300000 524030000 7474 3546 6825 62633;62634;62635;62636;62637;62638;62639;62640;62641;62642;62643;62644;62645;62646;62647;62648;62649;62650;62651;62652;62653;62654;62655;62656 49595;49596;49597;49598;49599;49600;49601;49602;49603;49604;49605;49606;49607;49608;49609;49610;49611;49612;49613;49614;49615;49616;49617;49618;49619;49620;49621;49622 49603 20 DHPYISEIK Unmodified 1100.5502 0.55022446 4602 Q9NRG4 SMYD2 N-lysine methyltransferase SMYD2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 46.053 40.311 2 0.022847 50652 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 114.64 88.533 20663000 4022500 0 16641000 0 0 0 0 0 0 0 0 0 0 0 0 7475 4602 6826 62657;62658 49623 49623 0 DHQEVETEGPESADTGDK Unmodified 1942.8028 0.80282292 3449 Q8NFQ8 TOR1AIP2 Torsin-1A-interacting protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 22.028 22.05 3 1.9441E-07 23123 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 69.522 62.794 8344400 0 0 0 0 4260600 0 0 0 0 0 0 0 0 4083800 0 7476 3449 6827 62659;62660;62661 49624;49625 49625 2 DHQFLEGK Unmodified 972.46649 0.46649483 3975 Q96RS6 NUDCD1 NudC domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.42 3.66 3 1 8 1 2 1 1 1 1 1 1 1 1 1 25.168 23.889 2 3.6223E-12 30002 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 196.95 143.27 261170000 17211000 113270000 72367000 0 0 4859500 3729200 3459700 2544000 5090900 9882500 0 0 8806900 19951000 7477 3975 6828 62662;62663;62664;62665;62666;62667;62668;62669;62670;62671;62672;62673 49626;49627;49628;49629 49629 4 DHQLDTRVSEFYEETK Unmodified 1995.9174 0.91739917 678 O95671 ASMTL N-acetylserotonin O-methyltransferase-like protein yes yes 0 0 1 By MS/MS 2 0 2 2 70.339 62.053 3;4 0.0023356 82525 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.793 50.899 80630000 80630000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7478 678 6829 62674;62675 49630;49631 49630 1 DHQTITIQEMPEK Oxidation (M) 1584.7454 0.7453718 1183 P25205 MCM3 DNA replication licensing factor MCM3 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 5.92 3.79 4 3 6 7 1 1 2 1 1 38.214 35.781 2;3 7.5201E-205 45770 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 260.57 244.57 430100000 0 388350000 0 0 0 5923100 0 0 0 3101400 11101000 10472000 0 0 11145000 7479 1183 6830 62676;62677;62678;62679;62680;62681;62682;62683;62684;62685;62686;62687;62688 49632;49633;49634;49635;49636;49637;49638;49639;49640;49641 49634 1712 9 DHQTITIQEMPEK Unmodified 1568.7505 0.75045718 1183 P25205 MCM3 DNA replication licensing factor MCM3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.43 3.65 5 2 14 1 5 1 1 1 1 1 1 1 1 2 2 1 1 1 51.391 49.665 2;3 3.8347E-55 63742 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 241.15 225.01 1428600000 26427000 948810000 6247600 13645000 17073000 29973000 21653000 19383000 20829000 38066000 74114000 57994000 23034000 45603000 85703000 7480 1183 6830 62689;62690;62691;62692;62693;62694;62695;62696;62697;62698;62699;62700;62701;62702;62703;62704;62705;62706;62707;62708;62709 49642;49643;49644;49645;49646;49647;49648;49649;49650;49651;49652;49653;49654;49655;49656;49657;49658;49659;49660;49661;49662;49663;49664;49665 49646 23 DHQVLIK Unmodified 851.4865 0.48650199 2153 Q08257 CRYZ Quinone oxidoreductase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 24.558 20.493 2 0.02978 26007 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 94.262 17.415 129720000 28202000 46556000 54959000 0 0 0 0 0 0 0 0 0 0 0 0 7481 2153 6831 62710;62711;62712 49666 49666 1 DHQYQFLEDAVR Unmodified 1519.7056 0.7055559 2262 Q13263 TRIM28 Transcription intermediary factor 1-beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 2 1 1 2 1 2 2 2 2 2 2 70.744 70.877 2;3 1.7634E-05 81694 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 125.75 106.43 541580000 0 0 0 8975600 5892800 39082000 13172000 38725000 16868000 41991000 38833000 63863000 50129000 48847000 175200000 7482 2262 6832 62713;62714;62715;62716;62717;62718;62719;62720;62721;62722;62723;62724;62725;62726;62727;62728;62729;62730;62731;62732 49667;49668;49669;49670;49671;49672;49673;49674;49675;49676;49677;49678;49679;49680;49681;49682;49683;49684;49685;49686;49687;49688;49689;49690;49691;49692;49693;49694 49690 26 DHRPPCAQEAPR Unmodified 1432.663 0.66297958 2303 Q13501 SQSTM1 Sequestosome-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 12.762 12.893 3 5.8608E-34 12448 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 146.79 128.99 179670000 0 0 0 9501100 14798000 16780000 11686000 14062000 12238000 17999000 11043000 0 25708000 17346000 28514000 7483 2303 6833 62733;62734;62735;62736;62737;62738;62739;62740;62741;62742;62743 49695;49696;49697;49698;49699;49700;49701;49702;49703;49704;49705;49706 49704 8 DHSASFSNSSYLQNQLLK Unmodified 2037.9756 0.97558275 3183 Q86WG5 SBF2 Myotubularin-related protein 13 yes yes 0 0 0 By MS/MS 2 0 1 1 79.871 71.74 3 4.4913E-05 94229 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.973 51.544 11929000 11929000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7484 3183 6834 62744 49707 49707 1 DHSFFIPDIEYLSDIK Unmodified 1937.9411 0.94109472 3723 Q969S3 ZNF622 Zinc finger protein 622 yes yes 0 0 0 By MS/MS By matching 2.67 0.471 1 2 2 1 97.93 92.946 3 8.8352E-32 116644 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.42 91.891 57794000 55461000 2332200 0 0 0 0 0 0 0 0 0 0 0 0 0 7485 3723 6835 62745;62746;62747 49708;49709 49709 2 DHSPTPSVFNSDEERYR Unmodified 2034.9031 0.90314609 2974 Q6UN15 FIP1L1 Pre-mRNA 3'-end-processing factor FIP1 yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 47.768 48.248 3 0.0016706 53274 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.319 30.926 19157000 0 0 0 0 0 0 0 0 0 0 0 0 0 8005700 11151000 7486 2974 6836 62748;62749 49710 49710 1 DHSVDSFK Unmodified 933.41921 0.41921028 2840 Q641Q2 FAM21A WASH complex subunit FAM21A yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 19.413 15.74 2 0.0052957 20619 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.72 98.246 33385000 0 33385000 0 0 0 0 0 0 0 0 0 0 0 0 0 7487 2840 6837 62750;62751 49711 49711 1 DHSVNSFK Unmodified 932.43519 0.4351947 5195 Q9Y4E1 FAM21C WASH complex subunit FAM21C yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 14.867 12.044 2 0.0032585 15964 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.46 95.348 21913000 0 17607000 4305700 0 0 0 0 0 0 0 0 0 0 0 0 7488 5195 6838 62752;62753 49712 49712 1 DHTLEDEDVIQIVK Unmodified 1652.8257 0.82573061 5092 Q9Y295 DRG1 Developmentally-regulated GTP-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.1 3.91 4 1 5 2 2 1 1 1 1 1 1 78.167 74.369 2;3 2.4029E-34 93288 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.76 106.13 125010000 52434000 51812000 4842100 0 0 0 0 2874000 0 0 0 0 0 0 13044000 7489 5092 6839 62754;62755;62756;62757;62758;62759;62760;62761;62762;62763 49713;49714;49715;49716;49717;49718;49719;49720;49721;49722;49723;49724 49716 12 DHTLVQTIAR Unmodified 1152.6251 0.62512073 2432 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 43.188 43.303 2 0.0062946 47339 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 75.378 63.665 44726000 0 0 0 3483100 0 6455200 4796000 7147600 0 0 7697500 0 8982400 6163700 0 7490 2432 6840 62764;62765;62766;62767;62768;62769;62770;62771 49725;49726;49727;49728;49729 49727 4 DHTTLLSEVMTPR Unmodified 1498.745 0.74497787 1114 P20839 IMPDH1 Inosine-5'-monophosphate dehydrogenase 1 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 76.904 77.108 3 8.2802E-12 88501 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.273 82.155 10570000 0 0 0 0 0 0 0 0 0 0 0 0 0 1570600 8999600 7491 1114 6841 62772;62773 49730 49730 1 DHTVRSTGPAK Unmodified 1167.5996 0.59963426 2262 Q13263 TRIM28 Transcription intermediary factor 1-beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.29 0.452 5 2 3 3 1 6.4264 3.1987 2;3 6.2287E-55 5339 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 215.87 169.06 14130000000 13363000000 605550000 161860000 0 0 0 0 0 0 0 0 0 0 0 0 7492 2262 6842 62774;62775;62776;62777;62778;62779;62780 49731;49732;49733;49734;49735;49736;49737;49738;49739;49740;49741 49740 10 DHTVSRLEEANSMLTK Unmodified 1829.8942 0.89416131 2296 Q13464 ROCK1 Rho-associated protein kinase 1 yes yes 0 0 1 By MS/MS 2 0 1 1 63.987 55.708 3 0.032206 74966 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 31.614 25.452 13614000 13614000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7493 2296 6843 62781 49742 49742 1 DHVFEDSYR Unmodified 1166.4993 0.49925152 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 32.046 32.28 2 0.012776 35298 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 94.302 83.888 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7494 3119 6844 62782;62783 49743;49744 49744 2 DHVFLCEGEEPK Unmodified 1458.6449 0.64492948 4460 Q9H910 HN1L Hematological and neurological expressed 1-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.83 3.76 6 4 14 3 5 2 1 1 1 1 1 2 2 1 2 2 47.302 45.184 2;3 4.9316E-18 56172 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 157.38 147.6 734610000 84124000 381490000 94609000 4314900 0 3492700 4678500 3728800 0 8649800 29215000 32337000 5971200 20355000 61641000 7495 4460 6845 62784;62785;62786;62787;62788;62789;62790;62791;62792;62793;62794;62795;62796;62797;62798;62799;62800;62801;62802;62803;62804;62805;62806;62807 49745;49746;49747;49748;49749;49750;49751;49752;49753;49754;49755;49756;49757;49758;49759;49760;49761;49762;49763;49764;49765 49760 16 DHVGRNNGNGLVK Unmodified 1378.7066 0.70655895 4639 Q9NTZ6 RBM12 RNA-binding protein 12 yes yes 0 0 1 By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching 10 0 8 1 1 1 1 1 1 1 1 11.476 11.657 3 0.046162 10762 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 27.967 16.648 17500000 0 0 0 0 0 2185200 1848400 1775700 0 1658500 0 2313200 1832900 2223800 3662100 7496 4639 6846 62808;62809;62810;62811;62812;62813;62814;62815 49766 49766 1 DHVSLGDYEIHDGMNLELYYQ Oxidation (M) 2526.1009 0.1009192 4271 Q9BZL1 UBL5 Ubiquitin-like protein 5 yes yes 0 1 0 By MS/MS 2 0 1 1 86.235 78.105 3 1.904E-10 101802 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.846 86.702 22937000 22937000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7497 4271 6847 62816 49767 49767 5729 1 DHVSLGDYEIHDGMNLELYYQ Unmodified 2510.106 0.10600457 4271 Q9BZL1 UBL5 Ubiquitin-like protein 5 yes yes 0 0 0 By MS/MS 2 0 1 1 91.314 83.184 3 1.9782E-72 107910 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 143.39 135.97 21239000 21239000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7498 4271 6847 62817 49768 49768 1 DHVVSDFSEHGSLK Unmodified 1555.7267 0.72668527 1749 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 39.798 39.107 3 0.0004497 41957 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.008 46.131 137610000 10525000 0 39817000 0 0 7261000 5006100 6484400 8496300 9822300 8376400 11397000 7555100 8011400 14862000 7499 1749 6848 62818;62819;62820;62821;62822;62823;62824;62825;62826;62827;62828;62829 49769;49770;49771;49772;49773;49774;49775;49776;49777;49778;49779;49780;49781 49772 13 DHYEATAMHR Unmodified 1229.5248 0.52475476 549 O75832 PSMD10 26S proteasome non-ATPase regulatory subunit 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 3 18 1 1 1 1 2 1 1 1 1 2 2 2 1 2 2 14.604 14.25 2;3 0.00036714 13577 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 111.06 100.75 699970000 115130000 11161000 45926000 23201000 41926000 33994000 7840900 10789000 7500100 102340000 94365000 141870000 16585000 35904000 11437000 7500 549 6849 62830;62831;62832;62833;62834;62835;62836;62837;62838;62839;62840;62841;62842;62843;62844;62845;62846;62847;62848;62849;62850 49782;49783;49784;49785;49786;49787;49788;49789;49790;49791;49792;49793;49794;49795;49796;49797;49798;49799;49800;49801 49785 9 DHYEATAMHR Oxidation (M) 1245.5197 0.51966938 549 O75832 PSMD10 26S proteasome non-ATPase regulatory subunit 10 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 7.6 3.67 3 7 1 1 1 1 1 1 1 1 1 1 7.0563 6.2131 3 0.0010629 4613 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 75.387 65.383 493150000 71804000 9594400 119170000 17736000 21654000 22315000 0 0 0 58939000 53936000 85119000 0 0 32884000 7501 549 6849 62851;62852;62853;62854;62855;62856;62857;62858;62859;62860 49802;49803;49804 49802 709 2 DHYEATAMHRAAAK Oxidation (M) 1586.726 0.72597376 549 O75832 PSMD10 26S proteasome non-ATPase regulatory subunit 10 yes yes 0 1 1 By MS/MS By MS/MS 2 0 4 2 2 10.875 7.8165 3;4 0.00060634 12222 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.864 65.015 120060000 112310000 0 7749300 0 0 0 0 0 0 0 0 0 0 0 0 7502 549 6850 62861;62862;62863;62864 49805;49806 49806 709 2 DHYEATAMHRAAAK Unmodified 1570.7311 0.73105914 549 O75832 PSMD10 26S proteasome non-ATPase regulatory subunit 10 yes yes 0 0 1 By MS/MS 2 0 1 1 22.174 17.277 4 0.019349 24776 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 31.215 20.581 106000000 106000000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7503 549 6850 62865 49807;49808 49808 2 DHYILQQGER Unmodified 1257.6102 0.61019895 5102 Q9Y2H2 INPP5F Phosphatidylinositide phosphatase SAC2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 31.214 31.39 3 0.012931 33576 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 47.302 36.396 59318000 0 0 0 2046600 2826000 5713000 3670800 4449900 3303100 5795600 7359700 10864000 0 3115600 10174000 7504 5102 6851 62866;62867;62868;62869;62870;62871;62872;62873;62874;62875;62876 49809 49809 1 DHYSNGFCTVYAK Unmodified 1560.6667 0.66672755 1705 P52907 CAPZA1 F-actin-capping protein subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 4 1 1 2 51.705 46.288 2;3 1.2737E-37 60601 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 186.46 160.53 44240000 16844000 16535000 10861000 0 0 0 0 0 0 0 0 0 0 0 0 7505 1705 6852 62877;62878;62879;62880 49810;49811;49812;49813 49810 4 DIAANEENRK Unmodified 1158.5629 0.56291441 486 O75368 SH3BGRL SH3 domain-binding glutamic acid-rich-like protein yes yes 0 0 1 By MS/MS By matching 2.33 0.471 2 1 2 1 10.268 7.3076 3 0.0043394 10079 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.389 53.158 37099000 0 35802000 1297700 0 0 0 0 0 0 0 0 0 0 0 0 7506 486 6853 62881;62882;62883 49814;49815 49814 1 DIAAYRAK Unmodified 906.49232 0.49231565 883;1207;1161 P26583;P09429;P23497 HMGB2;HMGB1;SP100 High mobility group protein B2;High mobility group protein B1;Nuclear autoantigen Sp-100 no no 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 21.849 17.988 2 0.025625 26401 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.32 47.676 8469000000 5866700000 1208400000 1393800000 0 0 0 0 0 0 0 0 0 0 0 0 7507 1207;883;1161 6854 62884;62885;62886 49816;49817 49816 0 DIADVTAVAEAILPK Unmodified 1524.8399 0.83992412 3915 Q96L91 EP400 E1A-binding protein p400 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.25 3.34 2 1 1 2 1 1 98.732 96.15 2 2.0248E-06 117541 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.34 115.11 27853000 0 25880000 1166200 0 0 0 0 0 0 0 0 0 0 0 806990 7508 3915 6855 62887;62888;62889;62890 49818;49819;49820;49821;49822;49823 49819 6 DIAENGCAPTPEEQLPK Unmodified 1867.8622 0.86219247 3516 Q8TEH3 DENND1A DENN domain-containing protein 1A yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.87 56.993 2 1.7732E-14 64760 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 122.42 112.37 77665000 0 0 0 5423200 5422200 0 6799200 0 7050900 7514200 11250000 10675000 6971000 6891800 9667000 7509 3516 6856 62891;62892;62893;62894;62895;62896;62897;62898;62899;62900;62901;62902 49824;49825;49826;49827;49828;49829;49830;49831;49832;49833;49834 49829 11 DIAFEVEDCDYIVQK Unmodified 1842.8346 0.83458074 1323 P32754 HPD 4-hydroxyphenylpyruvate dioxygenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.29 0.452 5 2 3 3 1 84.55 79.238 2;3 1.1896E-44 101234 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 155.48 137.21 421240000 292970000 97301000 30961000 0 0 0 0 0 0 0 0 0 0 0 0 7510 1323 6857 62903;62904;62905;62906;62907;62908;62909 49835;49836;49837;49838;49839;49840;49841;49842;49843;49844;49845;49846 49842 11 DIAGEAISFASGK Unmodified 1264.6299 0.62993134 2123 Q06190 PPP2R3A Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching 8.36 3.15 2 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 80.218 79.445 2 0.00028506 92200 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 82.171 61.842 103060000 0 74260000 1128100 0 0 2402900 1998000 2993300 1659800 4261500 3643200 0 1990300 2154200 6564800 7511 2123 6858 62910;62911;62912;62913;62914;62915;62916;62917;62918;62919;62920;62921;62922;62923 49847;49848;49849;49850;49851;49852;49853;49854;49855 49851 9 DIAGIHLPTNVK Unmodified 1276.7139 0.71393574 2929 Q6P2P2 PRMT9 Putative protein arginine N-methyltransferase 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 73.888 73.756 3 0.024348 90325 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 36.284 19.117 63353000 0 0 5135300 0 2194300 8393200 5523200 4111600 4386300 7360400 6942000 6174300 0 6611800 6520900 7512 2929 6859 62924;62925;62926;62927;62928;62929;62930;62931;62932;62933;62934 49856;49857;49858;49859 49859 4 DIAGSGDGTQEVSK Unmodified 1362.6263 0.62630252 4697 Q9NWH9 SLTM SAFB-like transcription modulator yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.99 22.197 2 1.0219E-11 22804 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 128.88 106.14 112680000 0 0 0 5315600 7826900 10573000 7514200 5168200 9973800 11318000 9217700 16143000 9189800 7986600 12453000 7513 4697 6860 62935;62936;62937;62938;62939;62940;62941;62942;62943;62944;62945;62946 49860;49861;49862;49863;49864;49865;49866;49867;49868;49869;49870;49871;49872;49873 49870 14 DIALGMQTEIEEQDDILDRLTTK Unmodified 2646.3058 0.30582659 683 O95721 SNAP29 Synaptosomal-associated protein 29 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 96.483 90.666 3 9.7876E-131 114864 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 186.86 172.31 18774000 18774000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7514 683 6861 62947;62948 49874;49875 49875 2 DIALGVFDVVVTDPSCPASVLK Unmodified 2301.1926 0.19263474 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 99.871 91.741 2 0.00014807 118292 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.707 71.878 9065400 9065400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7515 2203 6862 62949 49876 49876 1 DIAPPPEECLQLLSR Unmodified 1736.8767 0.87672033 4023 Q99567 NUP88 Nuclear pore complex protein Nup88 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 2 2 2 2 2 83.945 84.047 2;3 6.5899E-23 97469 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 132.59 118.92 123060000 0 0 0 4023800 0 5352900 5263800 5644700 15514000 0 0 33609000 15706000 18369000 19574000 7516 4023 6863 62950;62951;62952;62953;62954;62955;62956;62957;62958;62959;62960;62961;62962;62963 49877;49878;49879;49880;49881;49882;49883 49882 7 DIAQQLQATCTSLGSSIQGLPTNVK Unmodified 2629.3381 0.33812978 421 O60664 PLIN3 Perilipin-3 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 89.604 89.758 3 0.043408 104137 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 17.369 13.636 15319000 0 0 0 0 0 0 0 0 0 5971500 2519600 0 0 0 6828200 7517 421 6864 62964;62965;62966 49884 49884 1 DIATIVADK Unmodified 944.51786 0.51786169 5146 Q9Y3A5 SBDS Ribosome maturation protein SBDS yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.251 55.382 2 0.0054364 63061 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 77.732 26.766 339770000 0 0 0 19652000 17976000 33849000 22419000 16067000 16988000 31040000 35864000 34447000 22277000 29653000 59539000 7518 5146 6865 62967;62968;62969;62970;62971;62972;62973;62974;62975;62976;62977;62978 49885;49886;49887;49888;49889;49890;49891;49892;49893;49894;49895;49896;49897 49891 12 DIAVLFTK Unmodified 905.52222 0.52221879 2165 Q08AF3 SLFN5 Schlafen family member 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching 10 0 17 2 2 1 2 2 1 1 1 2 1 1 1 77.673 77.7 2 0.0099634 89958 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 81.191 0 165070000 0 0 0 10409000 10709000 13213000 11872000 14568000 8164800 13488000 9839500 35364000 10078000 8907500 18455000 7519 2165 6866 62979;62980;62981;62982;62983;62984;62985;62986;62987;62988;62989;62990;62991;62992;62993;62994;62995 49898;49899;49900;49901;49902 49898 5 DIAWTEDSK Unmodified 1063.4822 0.48220447 453 O75083 WDR1 WD repeat-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 45.519 39.803 2 0.006757 51858 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.56 79.408 393990000 16225000 377770000 0 0 0 0 0 0 0 0 0 0 0 0 0 7520 453 6867 62996;62997;62998 49903;49904;49905;49906;49907 49903 5 DIDAFWLQR Unmodified 1162.5771 0.57710791 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 4 2 1 1 85.93 86.043 2 0.02512 99623 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 75.109 52.978 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7521 528 6868 62999;63000;63001;63002 49908;49909;49910;49911 49911 4 DIDDDLEGEVTEECGK Unmodified 1822.7415 0.74146822 4912 Q9UHX1 PUF60 Poly(U)-binding-splicing factor PUF60 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.64 3.12 2 2 21 2 2 1 2 2 2 2 2 2 3 1 1 1 2 71.265 70.934 2 0 92076 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 379.94 370.98 421450000 142420000 155900000 0 9672500 9448000 17845000 6920600 12561000 6269400 6074600 14858000 10197000 5865500 6425000 16994000 7522 4912 6869 63003;63004;63005;63006;63007;63008;63009;63010;63011;63012;63013;63014;63015;63016;63017;63018;63019;63020;63021;63022;63023;63024;63025;63026;63027 49912;49913;49914;49915;49916;49917;49918;49919;49920;49921;49922;49923;49924;49925;49926;49927;49928;49929;49930;49931;49932;49933;49934;49935;49936;49937;49938;49939;49940;49941;49942;49943;49944 49925 32 DIDENAYAK Unmodified 1037.4666 0.46655441 2252 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25.835 25.36 2 0.0043999 27213 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 86.953 66.394 701160000 904470 47937000 0 46432000 58983000 66861000 26521000 24622000 18364000 87423000 103490000 97242000 25225000 42434000 54722000 7523 2252 6870 63028;63029;63030;63031;63032;63033;63034;63035;63036;63037;63038;63039;63040;63041 49945;49946;49947;49948;49949;49950;49951;49952;49953;49954;49955 49951 10 DIDEVSSLLR Unmodified 1145.5928 0.59281755 1641 P50990 CCT8 T-complex protein 1 subunit theta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.62 79.678 2 0.00055662 91314 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 144.12 99.675 431090000 0 0 0 23707000 18094000 36695000 18983000 19883000 13564000 39185000 54145000 62124000 34358000 36665000 73688000 7524 1641 6871 63042;63043;63044;63045;63046;63047;63048;63049;63050;63051;63052;63053 49956;49957;49958;49959;49960;49961;49962;49963;49964;49965;49966;49967 49962 10 DIDFLAEK Unmodified 949.47566 0.47566253 1114 P20839 IMPDH1 Inosine-5'-monophosphate dehydrogenase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 69.432 69.495 2 0.018722 78937 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.207 22.98 44814000 0 0 0 1948900 2737900 2782200 2447500 0 2075400 0 6224800 7018800 3085400 4683000 11810000 7525 1114 6872 63054;63055;63056;63057;63058;63059;63060;63061;63062;63063 49968;49969;49970;49971;49972 49969 5 DIDHETVVEEQIIGENSPPDYSEYMTGK Unmodified 3194.4238 0.42376948 1190 P25490 YY1 Transcriptional repressor protein YY1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 86.261 81.613 3 5.6086E-67 103040 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 124.28 118.38 53230000 14856000 35595000 2779800 0 0 0 0 0 0 0 0 0 0 0 0 7526 1190 6873 63064;63065;63066;63067 49973;49974;49975;49976;49977;49978 49977 6 DIDIEDLEELDPDFIMAK Oxidation (M) 2135.982 0.98203284 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 97.961 93.533 2 1.0045E-71 115073 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 172.99 166.84 196720000 99916000 84797000 12006000 0 0 0 0 0 0 0 0 0 0 0 0 7527 2378 6874 63068;63069;63070;63071;63072 49979;49980;49981;49982;49983;49984 49984 3862 6 DIDIEDLEELDPDFIMAK Unmodified 2119.9871 0.98711822 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 2 1 1 1 1 99.06 95.505 2 6.5127E-64 117311 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 208.08 193.27 49326000 4162300 41038000 4125700 0 0 0 0 0 0 0 0 0 0 0 0 7528 2378 6874 63073;63074;63075 49985;49986;49987 49985 3 DIDIHEVR Unmodified 995.50361 0.50360861 2046 Q00839 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.138 37.318 2 0.0048763 40809 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 133.55 91.084 4013300000 0 0 0 183410000 244030000 260750000 235910000 279350000 184030000 354390000 370960000 522180000 497340000 329540000 551390000 7529 2046 6875 63076;63077;63078;63079;63080;63081;63082;63083;63084;63085;63086;63087 49988;49989;49990;49991;49992;49993;49994;49995;49996;49997;49998;49999;50000;50001;50002;50003 50001 12 DIDILIVRENTEGEYSSLEHESVAGVVESLK Unmodified 3429.7151 0.71512412 1657 P51553 IDH3G Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial yes yes 0 0 1 By MS/MS 2 0 1 1 97.26 89.129 4 9.0185E-134 115099 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 149.57 129.53 41407000 41407000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7530 1657 6876 63088 50004 50004 1 DIDILNSAGK Unmodified 1044.5451 0.54513908 389 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 61.562 61.065 2 0.0060966 69088 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.299 7.4837 162070000 0 74057000 0 0 0 14843000 0 0 5244700 13710000 13440000 15260000 6834100 0 18686000 7531 389 6877 63089;63090;63091;63092;63093;63094;63095;63096;63097 50005;50006;50007;50008;50009;50010;50011;50012;50013 50009 8 DIDISSPEFK Unmodified 1149.5554 0.55536941 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 67.235 65.773 2 0.0056762 76309 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 67.993 53.154 402150000 10148000 60082000 3785400 25189000 21476000 20907000 28365000 27398000 22623000 26953000 30588000 0 32396000 31140000 61105000 7532 2172 6878 63098;63099;63100;63101;63102;63103;63104;63105;63106;63107;63108;63109;63110;63111;63112 50014;50015;50016;50017;50018;50019;50020;50021;50022;50023;50024 50022 11 DIDPEGK Unmodified 772.3603 0.36029842 1686 P52434 POLR2H DNA-directed RNA polymerases I, II, and III subunit RPABC3 yes yes 0 0 0 By MS/MS By MS/MS 1.5 0.5 2 2 2 2 61.468 61.167 2 0.031783 92726 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 88.029 27.671 85361000 52363000 32997000 0 0 0 0 0 0 0 0 0 0 0 0 0 7533 1686 6879 63113;63114;63115;63116 50025;50026 50026 2 DIDPIITR Unmodified 941.5182 0.51819605 4328 Q9H0H0 INTS2 Integrator complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.723 55.852 2 0.030197 62188 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.676 31.521 69729000 0 0 0 4522800 4836500 4619300 5071300 4658600 3793000 5843500 6174500 9568100 6594600 7027800 7019500 7534 4328 6880 63117;63118;63119;63120;63121;63122;63123;63124;63125;63126;63127;63128 50027;50028 50027 2 DIDPQNDLTFLR Unmodified 1445.7151 0.71505795 4542 Q9NP97;Q8TF09 DYNLRB1;DYNLRB2 Dynein light chain roadblock-type 1;Dynein light chain roadblock-type 2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 83.616 83.668 2 8.2072E-07 97010 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 136.63 118.77 78271000 0 0 0 947400 2289900 4049500 2955400 4159500 0 5351400 12708000 12749000 3799800 6427900 22834000 7535 4542 6881 63129;63130;63131;63132;63133;63134;63135;63136;63137;63138;63139;63140 50029;50030;50031;50032;50033;50034;50035;50036;50037;50038;50039;50040 50038 11 DIDPVQRYVPLK Unmodified 1441.7929 0.79291434 3711 Q93100 PHKB Phosphorylase b kinase regulatory subunit beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 77.849 73.072 3 0.0032147 93607 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.836 11.244 42635000 9754000 28129000 4752100 0 0 0 0 0 0 0 0 0 0 0 0 7536 3711 6882 63141;63142;63143;63144 50041;50042;50043;50044 50043 4 DIDTLRDPGSQLR Unmodified 1484.7583 0.75831975 954 P11717 IGF2R Cation-independent mannose-6-phosphate receptor yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 52.305 52.437 3 0.0046713 59257 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 46.481 31.919 66327000 0 0 0 3813500 4445800 7304000 5589000 0 4692400 7828600 7487200 8998500 0 8341000 7827300 7537 954 6883 63145;63146;63147;63148;63149;63150;63151;63152;63153;63154 50045;50046;50047;50048;50049;50050;50051 50046 7 DIEAMDPSILK Unmodified 1230.6166 0.61658946 1504 P46459 NSF Vesicle-fusing ATPase yes yes 0 0 0 By MS/MS 2 0 1 1 79.727 75.015 2 0.0028247 93423 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.17 52.798 61233000 0 61233000 0 0 0 0 0 0 0 0 0 0 0 0 0 7538 1504 6884 63155 50052 50052 1 DIEDVFYK Unmodified 1027.4862 0.48622722 2145 Q07955 SRSF1 Serine/arginine-rich splicing factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 71.593 71.022 2 0.0076415 80773 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 88.942 59.583 840280000 0 624060000 0 11408000 11276000 8759000 12813000 13112000 9838500 18510000 30065000 22209000 18863000 18516000 40847000 7539 2145 6885 63156;63157;63158;63159;63160;63161;63162;63163;63164;63165;63166;63167;63168;63169 50053;50054;50055;50056;50057;50058;50059;50060;50061;50062;50063;50064 50061 12 DIEEHLQR Unmodified 1038.5094 0.50942227 5029 Q9UNE7 STUB1 E3 ubiquitin-protein ligase CHIP yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 25.831 26.19 2 0.0043249 26806 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 111.82 39.677 49062000 0 0 0 0 0 2904800 0 1720800 0 3927100 6755400 13022000 3343000 0 17388000 7540 5029 6886 63170;63171;63172;63173;63174;63175;63176 50065;50066;50067;50068;50069;50070 50067 6 DIEGFMEENQTK Unmodified 1439.6239 0.62385968 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS 2 0 1 1 66.808 60.892 2 4.2239E-19 77958 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 159.83 150.47 45798000 0 45798000 0 0 0 0 0 0 0 0 0 0 0 0 0 7541 5049 6887 63177 50071;50072 50072 2 DIEHALSVSVFNNK Unmodified 1571.7944 0.79437091 200 O14656 TOR1A Torsin-1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 79.496 79.637 3 0.00018527 92052 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 60.157 52.376 51232000 0 0 0 0 0 3595600 2306300 4481500 3604400 5868100 5151100 7241600 4283800 4621700 10078000 7542 200 6888 63178;63179;63180;63181;63182;63183;63184;63185;63186;63187 50073;50074;50075;50076;50077;50078;50079;50080;50081;50082;50083 50074 11 DIEIDALSQK Unmodified 1130.5819 0.58191851 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 1 1 1 1 2 1 2 1 1 2 63.947 64.099 2 0.0013256 73057 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 107.57 34.314 351150000 0 0 0 15594000 20468000 21536000 27528000 25253000 18498000 24993000 28354000 48436000 34318000 26479000 59698000 7543 2556 6889 63188;63189;63190;63191;63192;63193;63194;63195;63196;63197;63198;63199;63200;63201;63202 50084;50085;50086;50087;50088;50089;50090;50091;50092 50088 6 DIELHLESSSHQETLDHIQK Unmodified 2358.1452 0.14516727 2721 Q5BKZ1 ZNF326 DBIRD complex subunit ZNF326 yes yes 0 0 0 By MS/MS 2 0 1 1 71.579 63.312 4 0.019036 84253 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 27.678 14.447 13579000 13579000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7544 2721 6890 63203 50093 50093 1 DIELQIR Unmodified 885.49198 0.4919813 154 O00429 DNM1L Dynamin-1-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 61.293 61.467 2 0.023371 70529 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 88.734 23.931 162100000 0 0 0 0 6517800 17669000 11598000 9525000 11372000 16971000 18951000 18917000 16034000 14054000 20495000 7545 154 6891 63204;63205;63206;63207;63208;63209;63210;63211;63212;63213;63214 50094;50095;50096;50097;50098;50099 50095 6 DIELVMSQANVSR Oxidation (M) 1476.7242 0.72424243 112 Q13765;E9PAV3 NACA Nascent polypeptide-associated complex subunit alpha;Nascent polypeptide-associated complex subunit alpha, muscle-specific form yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 56.726 56.071 2 7.7874E-14 64357 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 142.07 117.72 619990000 0 175950000 0 27486000 23284000 24396000 36607000 23004000 24368000 37911000 59490000 76716000 30547000 33538000 46684000 7546 112 6892 63215;63216;63217;63218;63219;63220;63221;63222;63223;63224;63225;63226;63227;63228;63229 50100;50101;50102;50103;50104;50105;50106;50107;50108;50109;50110;50111;50112;50113;50114;50115;50116;50117;50118 50100 144 19 DIELVMSQANVSR Unmodified 1460.7293 0.72932781 112 Q13765;E9PAV3 NACA Nascent polypeptide-associated complex subunit alpha;Nascent polypeptide-associated complex subunit alpha, muscle-specific form yes no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching 7.18 3.74 3 1 7 1 2 1 1 1 1 1 1 1 1 74.796 73.122 2;3 6.8046E-33 90157 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 166.86 15.716 306650000 36511000 227140000 5729800 0 2477000 0 3596200 0 3592900 0 5721000 6063100 0 5491600 10335000 7547 112 6892 63230;63231;63232;63233;63234;63235;63236;63237;63238;63239;63240 50119;50120;50121;50122;50123 50119 5 DIELVMSQANVSRAK Oxidation (M) 1675.8563 0.85631924 112 Q13765;E9PAV3 NACA Nascent polypeptide-associated complex subunit alpha;Nascent polypeptide-associated complex subunit alpha, muscle-specific form yes no 0 1 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 54.454 48.764 3 0.00025443 61212 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 78.814 67.374 135090000 35528000 50583000 48979000 0 0 0 0 0 0 0 0 0 0 0 0 7548 112 6893 63241;63242;63243;63244 50124;50125;50126;50127;50128;50129 50129 144 5 DIELVMSQANVSRAK Unmodified 1659.8614 0.86140461 112 Q13765;E9PAV3 NACA Nascent polypeptide-associated complex subunit alpha;Nascent polypeptide-associated complex subunit alpha, muscle-specific form yes no 0 0 1 By MS/MS By MS/MS By MS/MS 2.57 0.495 3 4 4 2 1 72.202 66.613 2;3 0.00026577 87625 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.549 19.692 168390000 105430000 11396000 51556000 0 0 0 0 0 0 0 0 0 0 0 0 7549 112 6893 63245;63246;63247;63248;63249;63250;63251 50130;50131;50132;50133;50134;50135;50136;50137 50135 8 DIENQYETQITQIEHEVSSSGQEVQSSAK Unmodified 3263.5066 0.5065879 1354 P35527;CON__P35527 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.56 3.57 5 3 17 2 5 1 2 1 1 1 2 1 2 2 1 1 1 2 88.982 87.826 3;4 0 110109 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 263.92 239.28 + 1438900000 55122000 684630000 25198000 170300000 10624000 5314800 2026700 49825000 10921000 233240000 84977000 21787000 3195400 11409000 70337000 7550 1354 6894 63252;63253;63254;63255;63256;63257;63258;63259;63260;63261;63262;63263;63264;63265;63266;63267;63268;63269;63270;63271;63272;63273;63274;63275;63276 50138;50139;50140;50141;50142;50143;50144;50145;50146;50147;50148;50149;50150;50151;50152;50153;50154;50155;50156;50157;50158;50159;50160;50161;50162;50163 50144 22 DIENYIQDGK Unmodified 1193.5564 0.55643205 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 55.339 54.971 2 0.0095944 61785 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 120.31 87.986 423310000 0 287000000 0 10390000 8483100 12338000 10551000 8859700 0 14124000 10649000 13789000 14523000 9572300 23040000 7551 3676 6895 63277;63278;63279;63280;63281;63282;63283;63284;63285;63286;63287;63288;63289 50164;50165;50166;50167;50168;50169 50166 2 DIENYIQDGKDDYKK Unmodified 1842.8636 0.86357268 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 2 By MS/MS 2 0 1 1 59.691 51.465 3 0.025769 69914 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.037 35.119 6415700 6415700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7552 3676 6896 63290 50170 50170 0 DIEQEVTREK Unmodified 1245.6201 0.62009493 5395 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 2 2 1 1 44.599 44.998 3 0.040108 50521 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 36.334 18.966 + 48819000 0 0 0 0 0 0 0 0 9671500 0 0 29834000 4725800 4588500 0 7553 5395 6897 63291;63292;63293;63294;63295;63296 50171;50172 50171 2 DIEQIAEFLEQSVK Unmodified 1647.8356 0.83556702 1081 P18858 LIG1 DNA ligase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.44 0.497 5 4 3 5 1 101.36 97.046 2;3 1.7974E-77 120525 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 245.94 210.71 118540000 41068000 76740000 731870 0 0 0 0 0 0 0 0 0 0 0 0 7554 1081 6898 63297;63298;63299;63300;63301;63302;63303;63304;63305 50173;50174;50175;50176;50177;50178;50179;50180;50181;50182 50181 10 DIEQIIR Unmodified 885.49198 0.4919813 265 O15226 NKRF NF-kappa-B-repressing factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 74.997 75.052 2 0.027168 86630 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 77.748 10.755 27078000 0 0 0 1705800 1964200 0 2402600 2369900 2845400 2464000 0 3026700 3784500 2611000 3903900 7555 265 6899 63306;63307;63308;63309;63310;63311;63312;63313;63314;63315 50183;50184;50185;50186 50184 4 DIEREDIEFICK Unmodified 1565.7396 0.73955814 1642 P50991 CCT4 T-complex protein 1 subunit delta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.91 3.42 6 3 24 4 4 1 2 2 2 2 2 2 2 2 2 2 2 2 69.945 68.886 2;3 6.7505E-14 89157 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 113.77 87.226 1989400000 964120000 403250000 46360000 20790000 20867000 70433000 20980000 35243000 32187000 40183000 51698000 65345000 38920000 48909000 130100000 7556 1642 6900 63316;63317;63318;63319;63320;63321;63322;63323;63324;63325;63326;63327;63328;63329;63330;63331;63332;63333;63334;63335;63336;63337;63338;63339;63340;63341;63342;63343;63344;63345;63346;63347;63348 50187;50188;50189;50190;50191;50192;50193;50194;50195;50196;50197;50198;50199;50200;50201;50202;50203;50204;50205;50206;50207;50208;50209;50210;50211 50201 23 DIESLMSEGNK Unmodified 1221.5547 0.55471749 4576 Q9NQT8 KIF13B Kinesin-like protein KIF13B yes yes 0 0 0 By MS/MS 2 0 1 1 66.507 60.59 2 0.0012882 77539 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.15 61.976 8921200 0 8921200 0 0 0 0 0 0 0 0 0 0 0 0 0 7557 4576 6901 63349 50212 50212 1 DIFDQLAK Unmodified 948.49165 0.49164694 1183 P25205 MCM3 DNA replication licensing factor MCM3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 75.761 75.237 2 0.025549 86850 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 58.604 27.992 1266400000 0 905100000 34591000 0 13927000 33418000 21084000 20402000 19137000 29305000 39912000 41616000 0 33628000 74289000 7558 1183 6902 63350;63351;63352;63353;63354;63355;63356;63357;63358;63359;63360;63361 50213;50214;50215;50216;50217;50218 50218 5 DIFNEHLR Unmodified 1042.5196 0.51959303 202 O14686 KMT2D Histone-lysine N-methyltransferase 2D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 51.721 51.979 2 0.023017 58863 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 60.682 4.56 14908000 0 0 0 0 0 4525700 0 0 0 0 3563100 0 6819200 0 0 7559 202 6903 63362;63363;63364;63365 50219;50220;50221 50219 3 DIFPYSENK Unmodified 1111.5186 0.51858998 505 O75475 PSIP1 PC4 and SFRS1-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58.121 57.533 2 0.0033124 65274 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 94.302 75.9 980580000 0 556000000 5157400 27040000 22851000 22526000 36447000 29569000 22500000 36386000 43439000 49953000 44945000 26359000 57401000 7560 505 6904 63366;63367;63368;63369;63370;63371;63372;63373;63374;63375;63376;63377;63378;63379 50222;50223;50224;50225;50226;50227;50228;50229;50230;50231;50232;50233;50234;50235;50236;50237;50238 50228 17 DIFQEIFDK Unmodified 1153.5655 0.56554017 1553 P48735 IDH2 Isocitrate dehydrogenase [NADP], mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 94.295 88.99 2 0.0026386 114831 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 117.04 91.097 9085700 7917100 0 1168600 0 0 0 0 0 0 0 0 0 0 0 0 7561 1553 6905 63380;63381 50239 50239 1 DIFQEIYDK Unmodified 1169.5605 0.56045479 552 O75874 IDH1 Isocitrate dehydrogenase [NADP] cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 81.409 80.215 2 0.0031541 92822 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 92.439 25.407 1667200000 200930000 1248100000 26542000 5861800 1784600 0 3715300 4298900 2116800 5563000 24365000 27380000 3140500 16650000 96793000 7562 552 6906 63382;63383;63384;63385;63386;63387;63388;63389;63390;63391;63392;63393;63394;63395;63396 50240;50241;50242;50243;50244;50245;50246;50247;50248;50249;50250;50251;50252;50253;50254 50243 15 DIFSEVGPVVSFR Unmodified 1450.7456 0.7456298 1329 P33240 CSTF2 Cleavage stimulation factor subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 91.461 91.603 2 0.0030379 106122 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.721 51.409 21314000 0 0 0 0 0 1081700 982840 1455800 1209100 3112700 2414800 1806900 0 1675600 7574500 7563 1329 6907 63397;63398;63399;63400;63401;63402;63403;63404;63405 50255;50256;50257;50258;50259;50260;50261;50262 50257 8 DIFTGLIGPMK Oxidation (M) 1206.6318 0.63184559 48 CON__ENSEMBL:ENSBTAP00000031900;P00450 CP Ceruloplasmin yes no 0 1 0 By MS/MS 10 0 1 1 84.189 84.382 2 0.0039705 97755 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 57.59 37.069 + 4313500 0 0 0 0 0 0 0 4313500 0 0 0 0 0 0 0 7564 48 6908 63406 50263 50263 41 1 DIFYIENQK Unmodified 1168.5764 0.57643921 4442 Q9H814 PHAX Phosphorylated adapter RNA export protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 66.481 66.525 2 0.021912 75534 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.864 40.353 84288000 0 0 0 6118500 5474900 0 5824200 5434400 5628400 0 15342000 0 0 15053000 25412000 7565 4442 6909 63407;63408;63409;63410;63411;63412;63413;63414 50264 50264 1 DIGEGNLSTAAAAALAAAAVK Unmodified 1883.9953 0.99525556 3475 Q8TAQ2 SMARCC2 SWI/SNF complex subunit SMARCC2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 2 2 2 1 2 2 2 2 2 93.6 93.697 2;3 2.0579E-05 108747 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.566 37.408 45784000 0 0 0 0 3017900 1984700 0 2651200 1779600 9597100 4535300 5338200 0 4049300 12831000 7566 3475 6910 63415;63416;63417;63418;63419;63420;63421;63422;63423;63424;63425;63426;63427;63428;63429;63430;63431 50265;50266;50267;50268;50269;50270;50271;50272;50273 50268 9 DIGKPIEK Unmodified 898.51238 0.51238239 438 O60869 EDF1 Endothelial differentiation-related factor 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 20.487 16.796 2 0.029587 20940 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 108.74 60.181 419320000 44562000 361800000 12953000 0 0 0 0 0 0 0 0 0 0 0 0 7567 438 6911 63432;63433;63434;63435 50274;50275 50275 0 DIGLPEITPK Unmodified 1081.6019 0.60192568 2551 Q15596 NCOA2 Nuclear receptor coactivator 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 76.287 76.312 2 0.0087229 87865 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 59.35 42.81 65210000 0 0 0 3979800 5088500 5916300 8416500 7518400 0 6900500 0 9763300 0 7700300 9926600 7568 2551 6912 63436;63437;63438;63439;63440;63441;63442;63443;63444 50276;50277;50278;50279;50280;50281;50282 50278 7 DIGSESTEDQAMEDIK Oxidation (M) 1782.7466 0.74655359 59 CON__P02662 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.741 41.919 2 3.2778E-36 46545 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 156.14 150.83 + 163550000 0 0 0 14138000 11167000 11770000 8910900 11104000 13996000 12505000 18412000 21172000 14875000 12449000 13047000 7569 59 6913 63445;63446;63447;63448;63449;63450;63451;63452;63453;63454;63455;63456 50283;50284;50285;50286;50287;50288;50289;50290;50291;50292;50293;50294 50284 67 12 DIHELFVPENK Unmodified 1339.6772 0.67721588 642 O95340 PAPSS2 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.25 3.75 6 1 13 1 3 3 1 1 2 1 1 2 1 2 2 68.988 66.995 2;3 0.0011969 86185 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.775 73.782 710640000 80505000 336730000 69252000 17164000 11730000 32574000 20351000 20328000 22428000 31871000 29455000 38253000 0 0 0 7570 642 6914 63457;63458;63459;63460;63461;63462;63463;63464;63465;63466;63467;63468;63469;63470;63471;63472;63473;63474;63475;63476 50295;50296;50297;50298;50299;50300;50301;50302;50303;50304;50305;50306;50307;50308;50309;50310;50311;50312;50313;50314 50301 18 DIHFMPCSGLTGANLK Unmodified 1759.8386 0.83856068 1014 P15170 GSPT1 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 6.9 3.81 6 2 12 3 3 2 1 1 1 1 1 2 1 2 2 79.654 77.86 2;3 4.3235E-32 98516 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 113.4 0 1427300000 832250000 474000000 33337000 0 0 5820500 0 4073300 3474800 5693800 6016100 12089000 3900000 13291000 33364000 7571 1014 6915 63477;63478;63479;63480;63481;63482;63483;63484;63485;63486;63487;63488;63489;63490;63491;63492;63493;63494;63495;63496 50315;50316;50317;50318;50319;50320;50321;50322;50323;50324;50325;50326;50327;50328 50323 14 DIHMTPSTDFYK Oxidation (M) 1469.6497 0.6496805 665 O95486 SEC24A Protein transport protein Sec24A yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 50.731 45.41 3 0.013732 58920 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 42.446 37.131 30748000 0 30748000 0 0 0 0 0 0 0 0 0 0 0 0 0 7572 665 6916 63497;63498 50329 50329 810 1 DIHMTPSTDFYK Unmodified 1453.6548 0.65476588 665 O95486 SEC24A Protein transport protein Sec24A yes yes 0 0 0 By MS/MS 2 0 1 1 67.46 61.544 3 0.0022756 78518 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.64 54.287 20289000 0 20289000 0 0 0 0 0 0 0 0 0 0 0 0 0 7573 665 6916 63499 50330 50330 0 DIHSSVSRVGK Unmodified 1183.6309 0.63093439 4446 Q9H871;Q96G75 RMND5A;RMND5B Protein RMD5 homolog A;Protein RMD5 homolog B yes no 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 21.024 16.906 2;3 0.0025467 24395 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.05 63.933 217290000 214500000 0 2794300 0 0 0 0 0 0 0 0 0 0 0 0 7574 4446 6917 63500;63501;63502 50331;50332 50331 0 DIHYSVK Unmodified 860.43922 0.43921744 5146 Q9Y3A5 SBDS Ribosome maturation protein SBDS yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 26.401 22.182 2 0.02209 29060 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.09 69.717 138880000 18238000 92450000 28189000 0 0 0 0 0 0 0 0 0 0 0 0 7575 5146 6918 63503;63504;63505 50333;50334;50335;50336;50337 50333 4 DIIACGFDINK Unmodified 1264.6122 0.61217279 1155 P23381 WARS Tryptophan--tRNA ligase, cytoplasmic;T1-TrpRS;T2-TrpRS yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 76.948 75.812 2 0.00057718 88049 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 80.688 60.902 1113200000 40992000 935710000 14650000 4308200 2669100 7899900 4686100 4428000 5781300 7779900 13783000 14327000 6799800 10519000 38853000 7576 1155 6919 63506;63507;63508;63509;63510;63511;63512;63513;63514;63515;63516;63517;63518;63519;63520;63521 50338;50339;50340;50341;50342;50343;50344;50345;50346;50347;50348;50349;50350 50338 11 DIIEHLNTSGAPADTSDPLQQICK Unmodified 2622.2595 0.2595451 1387 P37198 NUP62 Nuclear pore glycoprotein p62 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.42 1.93 1 11 1 1 1 1 1 1 1 1 1 1 1 1 80.18 80.002 3 3.8521E-77 92250 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 135.68 126.2 299540000 0 9414400 0 0 6351100 16339000 7868400 16607000 20554000 39474000 23997000 36802000 17286000 25256000 79593000 7577 1387 6920 63522;63523;63524;63525;63526;63527;63528;63529;63530;63531;63532;63533 50351;50352;50353;50354;50355;50356;50357;50358;50359;50360;50361;50362 50354 12 DIIGLAETGSGK Unmodified 1159.6085 0.60846762 4337 Q9H0S4 DDX47 Probable ATP-dependent RNA helicase DDX47 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 63.997 63.986 2 0.006894 73380 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 50.791 12.224 135960000 0 0 0 11164000 11575000 14459000 16257000 0 10287000 16527000 23382000 0 16104000 16201000 0 7578 4337 6921 63534;63535;63536;63537;63538;63539;63540;63541;63542 50363;50364 50364 2 DIIGVAETGSGK Unmodified 1145.5928 0.59281755 4168 Q9BUQ8 DDX23 Probable ATP-dependent RNA helicase DDX23 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 50.296 50.228 2 0.00035486 56743 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 98.04 38.021 102400000 0 0 0 14163000 13775000 0 18635000 10951000 0 0 0 0 22527000 22349000 0 7579 4168 6922 63543;63544;63545;63546;63547;63548;63549 50365;50366;50367;50368;50369;50370;50371 50366 7 DIIHDPGR Unmodified 921.46683 0.46682918 1930 P62917 RPL8 60S ribosomal protein L8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 25.091 25.294 2 0.012232 26757 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 75.109 43.82 260910000 0 0 0 14918000 15171000 14722000 14540000 15999000 10848000 19866000 18940000 30761000 34464000 29216000 41468000 7580 1930 6923 63550;63551;63552;63553;63554;63555;63556;63557;63558;63559;63560;63561 50372;50373;50374;50375;50376;50377;50378;50379;50380;50381;50382 50372 10 DIIHDPGRGAPLAK Unmodified 1458.7943 0.79431133 1930 P62917 RPL8 60S ribosomal protein L8 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 45.223 44.172 3 0.00028307 48613 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 57.804 36.574 742800000 224490000 0 51678000 0 22753000 31185000 41614000 41116000 41080000 36525000 38894000 49153000 47959000 47650000 68708000 7581 1930 6924 63562;63563;63564;63565;63566;63567;63568;63569;63570;63571;63572;63573;63574;63575 50383;50384;50385;50386;50387;50388;50389;50390;50391;50392;50393;50394;50395;50396 50392 11 DIIHFFR Unmodified 946.50249 0.5024864 1614 P49959 MRE11A Double-strand break repair protein MRE11A yes yes 0 0 0 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 77.837 78 2 0.024701 89534 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.263 27.737 20630000 0 0 0 0 0 0 0 0 0 0 0 4942700 2234200 2559900 10893000 7582 1614 6925 63576;63577;63578;63579 50397 50397 1 DIIIFVGTPVQK Unmodified 1328.7704 0.77038799 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 85.81 85.964 2 0.011447 99232 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 59.426 17.317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7583 1492 6926 63580;63581;63582;63583;63584 50398;50399;50400;50401;50402 50400 5 DIILQSNPLLEAFGNAK Unmodified 1841.9887 0.98871362 2215 Q12965 MYO1E Unconventional myosin-Ie no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.27 3.62 2 2 7 4 1 1 1 1 1 1 1 97.443 95.927 2;3 7.0243E-72 116682 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 174.05 150.3 129370000 0 114000000 0 0 0 0 0 736430 739190 3351700 2072300 1262800 0 0 7212700 7584 2215 6927 63585;63586;63587;63588;63589;63590;63591;63592;63593;63594;63595 50403;50404;50405;50406;50407;50408;50409;50410;50411 50404 9 DIINEEEVQFLK Unmodified 1475.7508 0.75077476 1578 P49588 AARS Alanine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.12 3.72 4 2 10 2 2 2 1 1 1 1 1 1 1 1 1 1 85.293 83.873 2 9.042E-13 103807 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 150.08 110.37 3931400000 262980000 3413700000 0 0 0 26620000 8855000 15039000 13111000 22247000 33036000 30453000 0 14655000 90698000 7585 1578 6928 63596;63597;63598;63599;63600;63601;63602;63603;63604;63605;63606;63607;63608;63609;63610;63611 50412;50413;50414;50415;50416;50417;50418;50419;50420;50421;50422;50423;50424;50425;50426;50427;50428;50429;50430 50416 17 DIINNTSLAELEK Unmodified 1458.7566 0.75658842 662 O95453 PARN Poly(A)-specific ribonuclease PARN yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 80.79 76.085 2 3.1031E-06 94596 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.12 93.03 318420000 0 318420000 0 0 0 0 0 0 0 0 0 0 0 0 0 7586 662 6929 63612;63613 50431;50432 50431 2 DIIPFIDK Unmodified 959.53278 0.53278348 4846 Q9UBL3 ASH2L Set1/Ash2 histone methyltransferase complex subunit ASH2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84.202 83.227 2 0.01308 104180 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.299 58.636 415960000 18151000 117260000 8498600 5173600 6985500 11989000 16535000 19108000 20402000 24061000 28341000 34765000 26786000 30614000 47284000 7587 4846 6930 63614;63615;63616;63617;63618;63619;63620;63621;63622;63623;63624;63625;63626;63627;63628 50433;50434;50435;50436;50437;50438;50439;50440 50437 8 DIIRAVGAYSK Unmodified 1191.6612 0.66117189 75 CON__P15636 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 27 2 2 2 3 1 5 1 3 2 2 2 2 52.915 53.064 2;3 0.00075206 59867 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 128.88 60.657 + 1301000000 0 0 0 79328000 72191000 123170000 65376000 25853000 144950000 92192000 182010000 135420000 126010000 124790000 129760000 7588 75 6931 63629;63630;63631;63632;63633;63634;63635;63636;63637;63638;63639;63640;63641;63642;63643;63644;63645;63646;63647;63648;63649;63650;63651;63652;63653;63654;63655 50441;50442;50443;50444;50445;50446;50447;50448;50449;50450;50451;50452;50453 50446 11 DIIRQPSEEEIIK Unmodified 1568.841 0.84098675 2498 Q15121 PEA15 Astrocytic phosphoprotein PEA-15 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7 3.87 3 5 1 1 1 1 1 1 1 1 62.313 60.259 3 0.0004322 68124 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.769 37.343 133520000 29281000 51451000 6924300 0 0 0 2027900 0 0 3439000 0 10991000 0 8568400 20839000 7589 2498 6932 63656;63657;63658;63659;63660;63661;63662;63663 50454;50455;50456;50457;50458;50459;50460;50461 50456 7 DIISDTSGDFR Unmodified 1224.5622 0.5622457 840 P07355;A6NMY6 ANXA2;ANXA2P2 Annexin A2;Putative annexin A2-like protein yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 62.448 62.567 2 0.0019298 72255 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 70.056 63.161 19593000 0 0 0 6925600 0 0 3488400 0 0 0 0 3284800 0 0 5894100 7590 840 6933 63664;63665;63666;63667;63668 50462;50463;50464;50465 50465 4 DIISDTSGDFRK Unmodified 1352.6572 0.65720872 840 P07355;A6NMY6 ANXA2;ANXA2P2 Annexin A2;Putative annexin A2-like protein yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.31 3.2 5 2 25 1 4 2 2 2 2 2 2 2 2 2 3 2 2 2 53.481 52.443 2;3 5.7452E-15 64289 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 155.42 82.16 4409800000 190980000 1444100000 66752000 361880000 79586000 182130000 120840000 177350000 96396000 219880000 278580000 373380000 228560000 194400000 394980000 7591 840 6934 63669;63670;63671;63672;63673;63674;63675;63676;63677;63678;63679;63680;63681;63682;63683;63684;63685;63686;63687;63688;63689;63690;63691;63692;63693;63694;63695;63696;63697;63698;63699;63700 50466;50467;50468;50469;50470;50471;50472;50473;50474;50475;50476;50477;50478;50479;50480;50481;50482;50483;50484;50485;50486;50487;50488;50489;50490;50491;50492;50493;50494 50479 21 DIISIAEDEDLR Unmodified 1387.6831 0.68308912 973 P12956 XRCC6 X-ray repair cross-complementing protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 80.74 80.88 2 5.3847E-08 93671 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 120.68 53.12 56311000 0 0 0 0 0 6001400 4123000 3351400 2871100 4726900 5557800 5541300 2967300 6168200 15003000 7592 973 6935 63701;63702;63703;63704;63705;63706;63707;63708;63709;63710;63711 50495;50496;50497;50498;50499;50500;50501;50502;50503;50504;50505 50504 11 DIISPELMADYLQPK Unmodified 1731.8753 0.87532334 2310 Q13535 ATR Serine/threonine-protein kinase ATR yes yes 0 0 0 By MS/MS 2 0 1 1 46.242 42.39 3 0.041627 53559 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 18.364 0 4637000 0 0 4637000 0 0 0 0 0 0 0 0 0 0 0 0 7593 2310 6936 63712 50506 50506 1 DIISQVDAK Unmodified 987.52368 0.52367535 3012 Q6ZSZ5 ARHGEF18 Rho guanine nucleotide exchange factor 18 yes yes 0 0 0 By MS/MS 2 0 1 1 52.05 46.277 2 0.014026 60026 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.452 25.172 79414000 0 79414000 0 0 0 0 0 0 0 0 0 0 0 0 0 7594 3012 6937 63713 50507 50507 1 DIKPDNLLLDSK Unmodified 1369.7453 0.74529545 2507 Q15208 STK38 Serine/threonine-protein kinase 38 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 67.781 67.886 3 0.024314 78345 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 35.737 26.091 40973000 0 0 0 0 4444200 7239000 4131300 0 0 0 8843200 0 0 4340000 11975000 7595 2507 6938 63714;63715;63716;63717;63718;63719 50508;50509;50510;50511;50512 50512 4 DIKPENLLLGSAGELK Unmodified 1695.9407 0.94070079 231 O14965 AURKA Aurora kinase A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 83.099 83.233 3 0.030893 96347 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 27.85 21.413 8354600 0 0 0 0 0 2721900 0 3023500 2609200 0 0 0 0 0 0 7596 231 6939 63720;63721;63722 50513;50514 50514 2 DILADLIPK Unmodified 996.58555 0.58554733 490 O75390 CS Citrate synthase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.67 3.77 4 2 1 2 1 1 1 93.152 89.8 2 0.020387 105267 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.166 43.18 227890000 32910000 185420000 4374300 0 0 0 0 0 0 0 0 0 0 711170 4473200 7597 490 6940 63723;63724;63725;63726;63727;63728 50515;50516;50517;50518 50515 4 DILAELTK Unmodified 901.51205 0.51204804 2837 Q5XPI4 RNF123 E3 ubiquitin-protein ligase RNF123 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 81.227 77.611 2 0.028816 96262 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.282 23.728 29743000 0 27855000 1887900 0 0 0 0 0 0 0 0 0 0 0 0 7598 2837 6941 63729;63730 50519 50519 1 DILALMEVK Unmodified 1030.5733 0.57326808 3812 Q96EK4 THAP11 THAP domain-containing protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 88.494 88.571 2 0.013737 102907 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 59.35 41.314 16537000 0 0 0 0 1855000 2369900 1800500 1686900 0 2759600 0 3821500 2243300 0 0 7599 3812 6942 63731;63732;63733;63734;63735;63736;63737 50520;50521;50522;50523;50524;50525 50525 6 DILAPNLQWHAGR Unmodified 1489.779 0.77899561 3204 Q86Y56 DNAAF5 Dynein assembly factor 5, axonemal yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 75.524 75.581 3 6.337E-05 87589 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 85.288 73.849 84332000 0 0 0 1539800 1956300 11107000 2331900 6641100 7912500 0 5296100 7495100 5562300 9513500 24976000 7600 3204 6943 63738;63739;63740;63741;63742;63743;63744;63745;63746;63747;63748 50526;50527;50528;50529;50530;50531;50532;50533 50532 8 DILASADTGSGK Unmodified 1133.5564 0.55643205 2769 Q5T1V6 DDX59 Probable ATP-dependent RNA helicase DDX59 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 35.514 35.658 2 0.0017273 39876 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 65.5 30.693 71318000 0 0 0 4923600 6185100 0 6116900 4608800 4722500 5299200 7231600 0 9686900 9484300 13059000 7601 2769 6944 63749;63750;63751;63752;63753;63754;63755;63756;63757;63758 50534;50535;50536;50537;50538;50539;50540;50541;50542;50543 50543 10 DILEDVVTSAIK Unmodified 1301.7078 0.70784731 5276 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 yes yes 0 0 0 By MS/MS By MS/MS 2.4 0.49 3 2 2 3 96.202 91.296 2 3.1289E-14 113872 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 139.43 95.038 322520000 34212000 288310000 0 0 0 0 0 0 0 0 0 0 0 0 0 7602 5276 6945 63759;63760;63761;63762;63763 50544;50545;50546;50547 50544 4 DILEPDAAEPDVQR Unmodified 1566.7526 0.75256567 1798 P57764 GSDMD Gasdermin-D yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 61.298 61.561 2 0.00036066 70469 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 82.171 33.531 43353000 0 0 0 0 0 7493100 0 0 0 6153000 0 6262800 5531900 5088100 12824000 7603 1798 6946 63764;63765;63766;63767;63768;63769 50548;50549;50550;50551;50552;50553;50554 50549 7 DILETHLR Unmodified 995.53999 0.53999412 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.863 48.026 2 0.0039936 53532 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 132.29 63.37 977940000 0 0 0 55776000 39869000 82081000 46613000 49138000 46961000 88681000 89223000 97713000 101830000 88880000 191170000 7604 1986 6947 63770;63771;63772;63773;63774;63775;63776;63777;63778;63779;63780;63781 50555;50556;50557;50558;50559;50560;50561;50562;50563;50564;50565;50566;50567;50568;50569 50567 14 DILETHLREK Unmodified 1252.6776 0.67755023 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 7.93 3.43 3 1 11 2 1 1 1 1 1 2 1 1 1 1 2 41.393 40.041 2;3 0.0022782 43234 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.374 29.653 298710000 173610000 10641000 11998000 0 0 8348700 0 7175700 7729700 11515000 8319900 14777000 11021000 10111000 23462000 7605 1986 6948 63782;63783;63784;63785;63786;63787;63788;63789;63790;63791;63792;63793;63794;63795;63796 50570;50571;50572;50573;50574;50575;50576;50577;50578;50579;50580;50581;50582;50583 50583 12 DILFPYIEENVK Unmodified 1478.7657 0.76569654 4914 Q9UHY7 ENOPH1 Enolase-phosphatase E1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4 3.03 2 2 1 2 2 1 93.149 89.229 2 0.0027969 104498 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.067 56.842 301060000 24982000 267040000 0 0 0 0 0 0 0 0 0 0 0 0 9036200 7606 4914 6949 63797;63798;63799;63800;63801 50584;50585;50586;50587 50585 4 DILIDPIR Unmodified 953.55458 0.55458155 3199 Q86XP3 DDX42 ATP-dependent RNA helicase DDX42 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 77.796 77.83 2 0.016586 88930 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 67.032 30.637 86763000 0 0 0 5647400 4197900 11506000 5922000 0 0 11809000 9490400 9063700 7375200 7657900 14093000 7607 3199 6950 63802;63803;63804;63805;63806;63807;63808;63809;63810;63811 50588;50589;50590;50591;50592;50593;50594;50595;50596;50597 50593 10 DILILSSHK Unmodified 1024.5917 0.59169534 2456 Q14966 ZNF638 Zinc finger protein 638 yes yes 0 0 0 By MS/MS 10 0 1 1 56.49 56.657 2 0.018109 64177 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 55.112 14.083 5071200 0 0 0 0 0 0 0 0 5071200 0 0 0 0 0 0 7608 2456 6951 63812 50598 50598 1 DILIQYDR Unmodified 1034.5397 0.53965977 1879 P62249 RPS16 40S ribosomal protein S16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.953 61.056 2 0.0044102 69858 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 112.17 57.622 648810000 0 0 0 30969000 38141000 39239000 31932000 41658000 30529000 65191000 56782000 86802000 76918000 61080000 89569000 7609 1879 6952 63813;63814;63815;63816;63817;63818;63819;63820;63821;63822;63823;63824 50599;50600;50601;50602;50603 50599 5 DILLCDPIPLDTEVTALSEDEYFSAGVVK Unmodified 3208.5737 0.57372818 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 100.24 94.98 3 2.5889E-30 119231 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.974 88.804 24311000 23121000 0 1189700 0 0 0 0 0 0 0 0 0 0 0 0 7610 2203 6953 63825;63826 50604;50605 50604 2 DILLIGHR Unmodified 935.55525 0.55525025 4964 Q9UKF7 PITPNC1 Cytoplasmic phosphatidylinositol transfer protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 57.465 58.066 2 0.043141 65368 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.358 29.998 4045100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4045100 7611 4964 6954 63827 50606 50606 1 DILLLPLQLPR Unmodified 1289.8071 0.80710784 2340 Q13671 RIN1 Ras and Rab interactor 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 97.519 97.658 2 0.00794 113379 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.223 64.919 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7612 2340 6955 63828;63829 50607;50608 50608 2 DILLQQQQQLGHGGPEAAPR Unmodified 2155.1134 0.11341363 3108 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 1 1 2 1 1 2 2 2 2 1 2 62.026 62.195 2;3 3.9186E-97 70146 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 171.72 163.12 1079000000 0 0 0 37413000 60138000 87774000 72185000 67007000 65282000 106760000 114880000 118560000 75969000 65964000 207110000 7613 3108 6956 63830;63831;63832;63833;63834;63835;63836;63837;63838;63839;63840;63841;63842;63843;63844;63845;63846;63847 50609;50610;50611;50612;50613;50614;50615;50616;50617;50618;50619;50620;50621;50622 50618 14 DILLRPELEELR Unmodified 1494.8406 0.84059282 723 P00387 CYB5R3 NADH-cytochrome b5 reductase 3;NADH-cytochrome b5 reductase 3 membrane-bound form;NADH-cytochrome b5 reductase 3 soluble form yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 81.599 81.739 3 0.0009139 94143 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.536 54.572 55505000 0 0 0 0 0 4778600 1493000 4703100 5097700 6321800 3950700 6823800 2458600 4847800 15030000 7614 723 6957 63848;63849;63850;63851;63852;63853;63854;63855;63856;63857 50623;50624;50625;50626;50627;50628 50625 6 DILNPDSSMETSPDFFF Unmodified 1960.8401 0.84006005 2627 Q16666 IFI16 Gamma-interferon-inducible protein 16 yes yes 0 0 0 By MS/MS 2 0 1 1 100.25 95.533 2 0.012267 118091 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 43.544 36.174 18393000 0 18393000 0 0 0 0 0 0 0 0 0 0 0 0 0 7615 2627 6958 63858 50629 50629 1 DILPCLDGYLK Unmodified 1305.6639 0.663874 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.56 3.62 4 1 11 1 3 1 1 1 1 1 1 1 1 1 1 1 1 90.171 88.773 2 0.00046749 110746 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 109.29 88.961 1635700000 48764000 1495100000 9673000 0 2383200 4200400 2211200 4931300 3880200 8982900 7301400 5648300 3126300 9001400 30441000 7616 1986 6959 63859;63860;63861;63862;63863;63864;63865;63866;63867;63868;63869;63870;63871;63872;63873;63874 50630;50631;50632;50633;50634;50635;50636;50637;50638;50639;50640;50641;50642;50643;50644;50645 50638 16 DILPFDHSR Unmodified 1098.5458 0.54580778 2113 Q05209 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 61.551 61.729 2 0.0091747 70070 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 67.494 23.099 47540000 0 0 0 0 1754400 5389100 0 2241700 0 3175000 5799600 6370600 5503600 5020900 12285000 7617 2113 6960 63875;63876;63877;63878;63879;63880;63881;63882;63883;63884 50646;50647;50648;50649;50650;50651;50652;50653;50654;50655 50654 10 DILQAVK Unmodified 785.4647 0.46470391 4003 Q96TA1 FAM129B Niban-like protein 1 yes yes 0 0 0 By MS/MS 3 0 1 1 53.945 49.056 2 0.047411 60854 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 77.72 9.6864 30740000 0 30740000 0 0 0 0 0 0 0 0 0 0 0 0 0 7618 4003 6961 63885 50656 50656 1 DILQNVFK Unmodified 975.53893 0.53893149 1496 P46063 RECQL ATP-dependent DNA helicase Q1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 81.808 80.607 2 0.0074285 93401 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 89.673 26.831 635590000 36818000 425050000 10293000 3232400 5480600 13367000 8157900 9308900 8321200 13818000 19315000 21360000 11618000 0 49454000 7619 1496 6962 63886;63887;63888;63889;63890;63891;63892;63893;63894;63895;63896;63897;63898;63899;63900 50657;50658;50659;50660;50661;50662;50663;50664;50665;50666;50667;50668;50669 50658 13 DILQSCQTSEECELARANSTSDEL Unmodified 2755.1913 0.19126712 5043 Q9UNW1 MINPP1 Multiple inositol polyphosphate phosphatase 1 yes yes 0 0 1 By MS/MS 3 0 1 1 78.285 74.866 3 0.031985 89854 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 22.409 19.647 9615200 0 9615200 0 0 0 0 0 0 0 0 0 0 0 0 0 7620 5043 6963 63901 50670 50670 1 DILRAPVDITGQFEK Unmodified 1700.9097 0.90973501 1579 P49589 CARS Cysteine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 6.56 3.86 3 1 5 1 2 1 1 1 1 1 1 83.024 81.03 3 1.2554E-10 102114 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.39 89.24 192010000 32569000 108140000 12026000 0 0 3908000 0 0 2758700 6586300 0 4505600 0 0 21517000 7621 1579 6964 63902;63903;63904;63905;63906;63907;63908;63909;63910 50671;50672;50673;50674;50675;50676;50677;50678 50676 8 DILTSVVSR Unmodified 988.55531 0.55530983 3760 Q96BN2 TADA1 Transcriptional adapter 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.115 71.189 2 0.01094 81811 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 63.565 41.073 71160000 0 0 0 3437300 4756900 5009700 4572700 4752200 4618700 7809300 7245100 9272700 6624200 5297900 7763200 7622 3760 6965 63911;63912;63913;63914;63915;63916;63917;63918;63919;63920;63921;63922 50679;50680;50681;50682;50683;50684;50685;50686 50684 8 DILVLPLDLTDTGSHEAATK Unmodified 2108.1001 0.10011456 5142 Q9Y394 DHRS7 Dehydrogenase/reductase SDR family member 7 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 90.379 90.502 3 0.00016515 104896 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.528 35.055 7918600 0 0 0 0 0 1010500 0 1194900 0 3115300 0 0 0 0 2597900 7623 5142 6966 63923;63924;63925;63926 50687;50688 50688 2 DILYIGDHIFGDILK Unmodified 1730.9243 0.92432245 1609 P49902 NT5C2 Cytosolic purine 5'-nucleotidase yes yes 0 0 0 By MS/MS By MS/MS By matching 2.2 0.4 4 1 3 1 1 98.612 93.213 2;3 4.9648E-50 118318 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 164.11 115.37 79692000 73296000 5745200 650650 0 0 0 0 0 0 0 0 0 0 0 0 7624 1609 6967 63927;63928;63929;63930;63931 50689;50690;50691;50692 50692 4 DILYVFQGIDGK Unmodified 1366.7133 0.71326704 3787 Q96CW5 TUBGCP3 Gamma-tubulin complex component 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 90.064 90.2 2 0.014734 104443 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.927 36.045 9708600 0 0 0 0 0 987240 0 1031100 1045300 1268200 1259100 0 495990 963670 2658000 7625 3787 6968 63932;63933;63934;63935;63936;63937;63938;63939 50693 50693 1 DIMAEIYK Oxidation (M) 997.47903 0.47903335 849 P07858 CTSB Cathepsin B;Cathepsin B light chain;Cathepsin B heavy chain yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 48.159 48.073 2 0.021491 55328 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 54.205 29.573 29190000 0 0 0 13116000 2675000 0 3552900 3909000 2612200 0 0 0 0 3325200 0 7626 849 6969 63940;63941;63942;63943;63944;63945 50694;50695 50695 2 DIMAEIYK Unmodified 981.48412 0.48411873 849 P07858 CTSB Cathepsin B;Cathepsin B light chain;Cathepsin B heavy chain yes yes 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 70.972 70.965 2 0.017826 82010 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 65.038 29.158 26086000 0 0 0 18898000 0 0 1011300 0 0 0 0 0 0 0 6176600 7627 849 6969 63946;63947;63948 50696;50697 50697 2 DIMEDAIDNRLDSK Unmodified 1633.7618 0.76175015 125 O00186 STXBP3 Syntaxin-binding protein 3 yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By MS/MS 8.4 3.2 1 4 1 1 1 1 1 71.658 70.213 3 4.6784E-06 89913 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.614 60.785 24375000 10787000 0 0 0 0 0 0 2979100 0 3384900 0 0 0 1076700 6147000 7628 125 6970 63949;63950;63951;63952;63953 50698;50699 50699 2 DIMEDTIEDK Oxidation (M) 1223.5227 0.52274866 1857 P61764 STXBP1 Syntaxin-binding protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 6.8 3.92 2 3 1 1 1 1 1 33.932 31.746 2 0.0012186 36345 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 96.331 72.176 45933000 4593900 33682000 0 0 0 4271400 1692300 0 1693300 0 0 0 0 0 0 7629 1857 6971 63954;63955;63956;63957;63958 50700;50701;50702 50700 3011 3 DIMEDTIEDK Unmodified 1207.5278 0.52783403 1857 P61764 STXBP1 Syntaxin-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 54.848 52.685 2 0.0085181 66072 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.149 63.48 191690000 11994000 145100000 0 0 0 9390900 0 0 4002800 9636200 0 0 0 0 11559000 7630 1857 6971 63959;63960;63961;63962;63963;63964 50703;50704;50705;50706;50707 50704 5 DIMEDTIEDKLDTK Unmodified 1664.7815 0.78148254 1857 P61764 STXBP1 Syntaxin-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 77.612 72.151 2;3 1.1561E-06 91236 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.76 95.446 46277000 8331900 37945000 0 0 0 0 0 0 0 0 0 0 0 0 0 7631 1857 6972 63965;63966;63967 50708;50709;50710 50708 3 DIMIQFK Oxidation (M) 909.46299 0.46298935 2332 Q13620 CUL4B Cullin-4B yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.83 2.61 1 5 1 1 1 1 1 1 63.696 63.123 2 0.033139 76590 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 82.263 32.143 24392000 0 3307800 0 0 0 4120300 0 0 0 4678200 4597700 0 0 2863100 4825000 7632 2332 6973 63968;63969;63970;63971;63972;63973 50711;50712 50711 2 DIMLATGK Unmodified 847.44734 0.44733929 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 41.623 42.016 2 0.023017 46883 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 60.682 25.576 37643000 0 0 0 0 0 0 0 0 0 7458500 0 0 0 9800900 20383000 7633 1565 6974 63974;63975;63976 50713;50714 50713 2 DIMTPLVALLK Oxidation (M) 1228.7101 0.71009592 3100 Q7Z4Q2 HEATR3 HEAT repeat-containing protein 3 yes yes 0 1 0 By MS/MS 2 0 1 1 97.519 92.746 2 1.8008E-06 114911 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.05 97.977 15352000 0 15352000 0 0 0 0 0 0 0 0 0 0 0 0 0 7634 3100 6975 63977 50715 50715 4709 1 DIMTPLVALLK Unmodified 1212.7152 0.71518129 3100 Q7Z4Q2 HEATR3 HEAT repeat-containing protein 3 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 101.12 94.696 2 0.00040427 119265 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.57 87.798 11441000 2521900 8918800 0 0 0 0 0 0 0 0 0 0 0 0 0 7635 3100 6975 63978;63979 50716;50717 50716 2 DINAVAASLR Unmodified 1028.5615 0.56145784 3043 Q7L1Q6 BZW1 Basic leucine zipper and W2 domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 63.217 63.382 2 0.049154 71843 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.426 24.618 136680000 0 0 0 0 12916000 13661000 10486000 5894600 6555200 14516000 15202000 21389000 10453000 9306800 16302000 7636 3043 6976 63980;63981;63982;63983;63984;63985;63986;63987;63988;63989;63990 50718 50718 0 DINAVAASLRK Unmodified 1156.6564 0.65642086 3043 Q7L1Q6 BZW1 Basic leucine zipper and W2 domain-containing protein 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 6 22 3 1 2 1 2 2 2 1 2 2 2 2 2 2 2 54.182 53.249 2;3 0.0016049 72795 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.522 43.294 6380500000 440160000 16504000 41715000 128150000 273090000 633020000 304040000 156890000 279110000 773650000 678660000 672890000 547840000 497970000 936840000 7637 3043 6977 63991;63992;63993;63994;63995;63996;63997;63998;63999;64000;64001;64002;64003;64004;64005;64006;64007;64008;64009;64010;64011;64012;64013;64014;64015;64016;64017;64018 50719;50720;50721;50722;50723;50724;50725;50726;50727;50728;50729;50730;50731;50732;50733;50734;50735 50727 12 DINAYNCEEPTEK Unmodified 1581.6617 0.66170175 1261 P30041 PRDX6 Peroxiredoxin-6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.95 4.02 3 3 1 12 2 4 1 1 1 1 1 1 1 1 1 1 1 1 1 44.45 43.826 2;3 1.7251E-51 38789 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 183.03 171.82 2015100000 295940000 395260000 5645800 33461000 20264000 52666000 44530000 32163000 27483000 63283000 161480000 177570000 46278000 197420000 461640000 7638 1261 6978 64019;64020;64021;64022;64023;64024;64025;64026;64027;64028;64029;64030;64031;64032;64033;64034;64035;64036;64037 50736;50737;50738;50739;50740;50741;50742;50743;50744;50745;50746;50747;50748;50749;50750;50751;50752;50753;50754 50750 19 DINELNLPK Unmodified 1054.5659 0.56587452 1831 P61081 UBE2M NEDD8-conjugating enzyme Ubc12 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64.28 63.157 2 0.0036824 73002 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 95.741 28.942 2344800000 46197000 1539100000 4308700 33681000 31973000 79957000 63707000 44240000 37214000 84323000 77617000 65959000 60333000 79322000 96872000 7639 1831 6979 64038;64039;64040;64041;64042;64043;64044;64045;64046;64047;64048;64049;64050;64051;64052 50755;50756;50757;50758;50759;50760;50761;50762;50763;50764;50765;50766;50767;50768;50769 50769 15 DINKLEEQNPDIVSEK Unmodified 1869.932 0.9319866 1159 P23458 JAK1 Tyrosine-protein kinase JAK1 yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 54.574 54.353 3 0.039041 61655 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 26.148 15.513 8750500 0 0 0 0 4423500 0 4327000 0 0 0 0 0 0 0 0 7640 1159 6980 64053;64054 50770 50770 1 DINLQDEDWNEFNDINK Unmodified 2120.9287 0.92869214 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 83.982 84.117 2 1.3805E-28 97148 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 115.8 107.43 20685000 0 0 0 0 0 0 0 0 0 5448800 0 3763700 0 3019900 8452300 7641 2930 6981 64055;64056;64057;64058 50771;50772;50773;50774 50772 4 DINNIVK Unmodified 814.45487 0.45486751 4475 Q9H9Q2 COPS7B COP9 signalosome complex subunit 7b yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 39.836 34.009 2 0.031008 44403 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.986 16.268 193160000 7663000 185500000 0 0 0 0 0 0 0 0 0 0 0 0 0 7642 4475 6982 64059;64060 50775 50775 1 DINPFSK Unmodified 819.41267 0.41266834 3463 Q8NI08 NCOA7 Nuclear receptor coactivator 7 yes yes 0 0 0 By MS/MS 2 0 1 1 52.991 47.199 2 0.045032 61054 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.616 22.105 22129000 0 22129000 0 0 0 0 0 0 0 0 0 0 0 0 0 7643 3463 6983 64061 50776;50777 50776 2 DINSVAIAPNDK Unmodified 1255.6408 0.64083038 2188 Q12788 TBL3 Transducin beta-like protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 47.613 47.846 2 0.00010264 53793 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 100.72 81.451 53788000 0 0 0 0 2820100 4564800 3808900 4508100 2998900 5976700 4058200 6214700 6342000 4503300 7992300 7644 2188 6984 64062;64063;64064;64065;64066;64067;64068;64069;64070;64071;64072 50778;50779;50780;50781;50782;50783;50784;50785;50786;50787;50788 50779 10 DINTFEQIDDYNPDTAMPAHSR Unmodified 2549.1129 0.11288087 5068 Q9UQ84 EXO1 Exonuclease 1 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 78.219 78.435 3 0.031962 90207 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 20.478 19.981 18019000 0 0 0 0 0 0 0 0 0 0 0 4873700 0 0 13146000 7645 5068 6985 64073;64074 50789 50789 1 DINTFLGTPVQK Unmodified 1331.7085 0.70851601 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 76.041 75.511 2 1.2729E-10 87228 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 145.89 113.95 267680000 0 101090000 0 9305900 9905500 10376000 13596000 11038000 13781000 17719000 13734000 17427000 7910700 15931000 25869000 7646 1492 6986 64075;64076;64077;64078;64079;64080;64081;64082;64083;64084;64085;64086;64087;64088 50790;50791;50792;50793;50794;50795;50796;50797;50798;50799;50800;50801;50802 50798 12 DINTFVGTPVEK Unmodified 1318.6769 0.67688153 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 66.925 66.245 2 3.0352E-08 75479 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 130.94 95.645 177010000 0 48287000 0 7277400 8472700 9155700 9970800 7901800 7287200 12089000 16058000 12994000 6721700 10090000 20700000 7647 1492 6987 64089;64090;64091;64092;64093;64094;64095;64096;64097;64098;64099;64100;64101;64102 50803;50804;50805;50806;50807;50808;50809;50810;50811;50812;50813;50814;50815;50816;50817;50818;50819 50807 16 DINTIEDAVK Unmodified 1116.5663 0.56626845 3808 Q96EB6 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.64 2.9 1 1 9 2 1 1 1 1 1 1 1 1 1 60.251 59.225 2 0.002199 73399 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.15 62.707 141680000 0 102240000 0 0 0 4479200 0 4784000 2554500 5240500 0 5731700 8290500 8361500 0 7648 3808 6988 64103;64104;64105;64106;64107;64108;64109;64110;64111;64112;64113 50820;50821;50822;50823;50824;50825;50826;50827;50828 50822 9 DINVSVGSQQPDTK Unmodified 1486.7264 0.72635092 1638 P50851 LRBA Lipopolysaccharide-responsive and beige-like anchor protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 42.737 42.983 2 0.0017697 47185 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.44 55.485 57447000 0 0 0 0 4668900 9653600 4802000 0 0 6515400 8113400 11591000 0 0 12103000 7649 1638 6989 64114;64115;64116;64117;64118;64119;64120 50829;50830;50831;50832;50833;50834 50832 6 DIPGLTDTTVPR Unmodified 1283.6721 0.67213051 1909 P62753 RPS6 40S ribosomal protein S6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.89 70.962 2 3.0341E-06 81840 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 135.55 135.55 2704200000 0 0 0 140210000 156330000 181040000 177770000 165340000 146080000 240880000 268400000 330640000 299900000 254550000 343090000 7650 1909 6990 64121;64122;64123;64124;64125;64126;64127;64128;64129;64130;64131;64132 50835;50836;50837;50838;50839;50840;50841;50842;50843;50844;50845;50846;50847;50848;50849;50850;50851 50849 16 DIPGLTDTTVPRR Unmodified 1439.7732 0.77324153 1909 P62753 RPS6 40S ribosomal protein S6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 60.056 60.006 3 0.00069827 68843 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 59.898 32.489 211390000 0 0 0 14375000 14901000 0 0 0 0 50205000 43939000 0 45917000 42055000 0 7651 1909 6991 64133;64134;64135;64136;64137;64138;64139 50852;50853;50854;50855;50856;50857;50858;50859 50859 8 DIPMPLVSSGVEHGNLR Oxidation (M) 1835.92 0.91998213 4477 Q9H9T3 ELP3 Elongator complex protein 3 yes yes 0 1 0 By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 2 1 1 1 1 1 1 1 68.393 68.42 3 6.0461E-05 78602 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 66.965 61.185 60164000 0 0 0 3335000 2785900 6522300 5987400 3547800 0 10249000 7737700 7429000 5832800 6736500 0 7652 4477 6992 64140;64141;64142;64143;64144;64145;64146;64147;64148;64149;64150 50860;50861;50862;50863;50864;50865 50861 5912 6 DIPMPLVSSGVEHGNLR Unmodified 1819.9251 0.9250675 4477 Q9H9T3 ELP3 Elongator complex protein 3 yes yes 0 0 0 By MS/MS 10 0 1 1 79.078 79.324 3 0.0020854 91275 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.005 40.617 8633000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8633000 7653 4477 6992 64151 50866 50866 1 DIPNENEAQFQIR Unmodified 1572.7532 0.75323437 2178 Q10567 AP1B1 AP-1 complex subunit beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.083 65.171 2 3.459E-10 74465 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 117.7 103.02 181060000 0 0 0 11760000 7373100 17498000 12340000 8761200 7141400 17274000 17449000 20527000 14016000 17095000 29824000 7654 2178 6993 64152;64153;64154;64155;64156;64157;64158;64159;64160;64161;64162;64163 50867;50868;50869;50870;50871;50872;50873;50874;50875;50876;50877;50878;50879 50876 13 DIPNENEAQFQIRDCPLNAEAASSK Unmodified 2816.3035 0.30353518 2178 Q10567 AP1B1 AP-1 complex subunit beta-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 76.494 71.651 3 9.7268E-134 90138 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 149.18 141.66 140510000 18711000 116310000 5490000 0 0 0 0 0 0 0 0 0 0 0 0 7655 2178 6994 64164;64165;64166;64167 50880;50881;50882;50883;50884;50885 50882 6 DIPNENELQFQIK Unmodified 1586.794 0.79403655 1937 P63010 AP2B1 AP-2 complex subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78.915 78.048 2 9.8057E-26 90590 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 163.16 150.07 471290000 10997000 220900000 0 7133700 12818000 23515000 12041000 15794000 12716000 25394000 21259000 29802000 15974000 20746000 42205000 7656 1937 6995 64168;64169;64170;64171;64172;64173;64174;64175;64176;64177;64178;64179;64180;64181 50886;50887;50888;50889;50890;50891;50892;50893;50894;50895;50896;50897;50898;50899;50900;50901;50902;50903 50886 18 DIPPLEFPK Unmodified 1054.5699 0.56989727 2195 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 81.092 81.12 2 0.020914 94077 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 52.716 31.416 41022000 0 0 0 2170300 2447800 4925100 0 3684400 4082600 0 0 7711000 4183600 3012900 8804300 7657 2195 6996 64182;64183;64184;64185;64186;64187;64188;64189;64190 50904;50905;50906;50907;50908 50906 5 DIPSFER Unmodified 862.41848 0.418482 1544 P48556 PSMD8 26S proteasome non-ATPase regulatory subunit 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.236 48.398 2 0.023406 55386 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 86.866 40.515 575470000 0 0 0 34983000 41517000 52302000 24760000 24652000 16830000 90594000 86365000 90403000 33065000 25982000 54018000 7658 1544 6997 64191;64192;64193;64194;64195;64196;64197;64198;64199;64200;64201;64202 50909;50910;50911;50912 50911 3 DIPSFERYMAQLK Unmodified 1596.797 0.79701344 1544 P48556 PSMD8 26S proteasome non-ATPase regulatory subunit 8 yes yes 0 0 1 By MS/MS 2 0 1 1 91.591 83.46 3 0.036546 108264 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 35.737 23.76 4102500 4102500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7659 1544 6998 64203 50913 50913 1 DIPVLVATDVAAR Unmodified 1338.7507 0.75071518 3199 Q86XP3 DDX42 ATP-dependent RNA helicase DDX42 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.879 82.942 2 1.3447E-06 95533 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 100.88 82.653 279050000 0 0 0 10479000 15850000 26448000 18892000 18714000 16597000 28892000 29763000 26233000 25328000 21770000 40088000 7660 3199 6999 64204;64205;64206;64207;64208;64209;64210;64211;64212;64213;64214;64215 50914;50915;50916;50917;50918;50919;50920;50921;50922;50923;50924;50925 50918 12 DIPVTAQPSK Unmodified 1054.5659 0.56587452 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 32.809 33.055 2 0.0099821 35979 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 56.81 11.475 87833000 0 0 0 0 3641200 6116600 5832700 3849700 4056900 0 11480000 11934000 10388000 9846400 20688000 7661 2203 7000 64216;64217;64218;64219;64220;64221;64222;64223;64224;64225 50926;50927;50928;50929;50930;50931;50932;50933;50934 50931 9 DIPYFQTK Unmodified 1010.5073 0.50729701 2966 Q6R327 RICTOR Rapamycin-insensitive companion of mTOR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 64.265 64.338 2 0.028761 73589 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 56.547 15.245 56789000 0 0 0 3039700 3575400 6141900 5503400 4577300 0 5637200 7828900 9868200 3359100 0 7258300 7662 2966 7001 64226;64227;64228;64229;64230;64231;64232;64233;64234;64235 50935;50936 50935 2 DIQDSLTVSNEVQTAK Unmodified 1746.8636 0.86357268 1524 P47755 CAPZA2 F-actin-capping protein subunit alpha-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.08 3.33 2 1 9 2 1 1 1 1 1 1 1 1 1 1 64.318 62.697 2 3.4217E-19 72787 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 128.54 115.59 70764000 6910900 19141000 0 0 3699400 0 3642900 0 0 5707900 6513900 7881600 3740700 4201100 9324700 7663 1524 7002 64236;64237;64238;64239;64240;64241;64242;64243;64244;64245;64246;64247 50937;50938;50939;50940;50941;50942;50943;50944;50945;50946;50947 50938 11 DIQEDSGMEPR Oxidation (M) 1291.535 0.53504468 550 O75844 ZMPSTE24 CAAX prenyl protease 1 homolog yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 19.111 19.141 2 0.0050849 19580 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 53.327 49.756 9636300 0 0 0 0 1328700 1781900 1670400 1732700 1198000 1924500 0 0 0 0 0 7664 550 7003 64248;64249;64250;64251;64252;64253;64254 50948;50949;50950;50951;50952 50949 710 5 DIQEDSGMEPRNEEEGNSEEIK Unmodified 2534.0715 0.071469561 550 O75844 ZMPSTE24 CAAX prenyl protease 1 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 6 1 1 1 1 1 1 42.105 42.367 3 8.2092E-07 47062 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 53.909 49.839 28772000 0 0 0 3479300 0 0 0 5766500 0 4493700 0 6715500 0 2548700 5768600 7665 550 7004 64255;64256;64257;64258;64259;64260 50953;50954;50955 50953 2 DIQEDSGMEPRNEEEGNSEEIK Oxidation (M) 2550.0664 0.066384183 550 O75844 ZMPSTE24 CAAX prenyl protease 1 homolog yes yes 0 1 1 By matching By MS/MS By MS/MS 10 0 3 1 1 1 32.997 33.055 3 7.934E-05 36122 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 42.711 39.249 11257000 0 0 0 0 0 2077200 2985200 0 6194800 0 0 0 0 0 0 7666 550 7004 64261;64262;64263 50956;50957 50957 710 2 DIQEESTFSSR Unmodified 1297.5786 0.57862405 1464 P42704 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 36.912 37.095 2 0.00031901 41232 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 109.42 104.45 56176000 0 0 0 5300700 2445900 7419700 3512400 0 2318400 5211300 4944200 8086600 5217200 3573200 8146800 7667 1464 7005 64264;64265;64266;64267;64268;64269;64270;64271;64272;64273;64274 50958;50959;50960;50961;50962;50963;50964;50965 50958 8 DIQEESTFSSRK Unmodified 1425.6736 0.67358707 1464 P42704 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 2 3 2 32.938 28.297 2;3 0.0058043 39223 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.403 49.402 77981000 26666000 46337000 4978300 0 0 0 0 0 0 0 0 0 0 0 0 7668 1464 7006 64275;64276;64277;64278;64279;64280;64281 50966;50967;50968;50969 50968 3 DIQENDEEAVQVK Unmodified 1515.7053 0.70528113 129 O00231 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 39.047 39.202 2 9.572E-12 42998 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 150.1 110.48 55909000 0 0 0 4933000 4212100 6176500 2430700 0 0 7646900 10910000 16996000 0 0 2603900 7669 129 7007 64282;64283;64284;64285;64286;64287;64288;64289 50970;50971;50972;50973;50974;50975;50976 50974 7 DIQGALHSYK Unmodified 1130.572 0.57202253 3284 Q8IYI6 EXOC8 Exocyst complex component 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 6.8 3.92 2 3 1 1 1 1 1 44.16 41.64 2 0.011777 56884 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.607 44.389 58048000 21772000 28214000 0 0 0 0 0 2712300 0 0 0 0 2702000 2647900 0 7670 3284 7008 64290;64291;64292;64293;64294 50977;50978;50979 50978 2 DIQGPGNPQCFSLR Unmodified 1587.7464 0.74637486 624 O95163 IKBKAP Elongator complex protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 68.118 68.31 2 0.043813 77543 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 42.976 27.71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7671 624 7009 64295 50980 50980 1 DIQHWESLKPEER Unmodified 1665.8111 0.8110836 1301 P31350 RRM2 Ribonucleoside-diphosphate reductase subunit M2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 53.988 54.283 3 0.028097 60421 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.682 37.544 63483000 0 0 0 0 0 6689000 3584900 6052500 1305800 0 5664400 8972400 5558200 6051700 19604000 7672 1301 7010 64296;64297;64298;64299;64300;64301;64302;64303;64304 50981 50981 0 DIQMPDGIR Unmodified 1043.507 0.50697943 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 60.938 61.006 2 0.0076455 68623 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 71.877 52.363 50534000 0 0 0 3661200 2495800 4792400 2516500 6626900 2200200 5451200 5602000 0 4457100 4962700 7768500 7673 2392 7011 64305;64306;64307;64308;64309;64310;64311;64312;64313;64314;64315 50982;50983;50984;50985;50986;50987;50988;50989;50990 50987 9 DIQMPDGIR Oxidation (M) 1059.5019 0.50189405 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 1 0 By MS/MS By matching By MS/MS By matching 10 0 4 1 1 1 1 35.128 34.977 2 0.013958 38505 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 52.482 29.99 10778000 0 0 0 2604400 2536600 0 0 2782500 2854300 0 0 0 0 0 0 7674 2392 7011 64316;64317;64318;64319 50991;50992 50991 3896 2 DIQMPDGIRR Unmodified 1199.6081 0.60809046 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 50.009 50.125 3 0.0026431 56570 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 51.268 23.939 61192000 0 0 0 5478000 0 0 0 0 0 13194000 0 0 0 6533300 35987000 7675 2392 7012 64320;64321;64322;64323;64324 50993;50994;50995;50996;50997 50993 5 DIQNMNFLLK Unmodified 1234.638 0.63799361 3151 Q86UP2 KTN1 Kinectin yes yes 0 0 0 By MS/MS 2 0 1 1 88.339 83.497 2 0.0010381 103750 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.94 68.494 25683000 0 25683000 0 0 0 0 0 0 0 0 0 0 0 0 0 7676 3151 7013 64325 50998 50998 1 DIQQSLADVSK Unmodified 1202.6143 0.61428128 419 O60645 EXOC3 Exocyst complex component 3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 57.046 56.577 2 2.7627E-05 64560 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 119.68 43.616 149290000 0 32162000 0 7498300 9078100 12783000 12458000 0 8857900 11200000 13645000 14391000 15785000 11434000 0 7677 419 7014 64326;64327;64328;64329;64330;64331;64332;64333;64334;64335;64336 50999;51000;51001;51002;51003;51004;51005;51006;51007;51008 51006 9 DIQQTLTQNMER Unmodified 1475.7038 0.70384134 4491 Q9HAV4 XPO5 Exportin-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 66.018 66.155 2 7.2472E-15 75098 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 156.48 116.44 96263000 0 0 0 4885700 0 12841000 3221200 5413900 0 9892300 15943000 11535000 7089200 6532400 18909000 7678 4491 7015 64337;64338;64339;64340;64341;64342;64343;64344;64345;64346;64347 51009;51010;51011;51012;51013;51014;51015;51016;51017;51018;51019;51020 51013 12 DIQQTLTQNMER Oxidation (M) 1491.6988 0.69875596 4491 Q9HAV4 XPO5 Exportin-5 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 45.7 45.954 2 0.0022543 51909 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 60.434 44.894 15536000 0 0 0 0 0 4542600 2363600 0 0 3898200 0 0 0 0 4731900 7679 4491 7015 64348;64349;64350;64351;64352 51021;51022;51023 51022 5925 3 DIQSCTVEVHFQK Unmodified 1589.7508 0.75079153 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.89 3.41 3 2 13 1 3 1 1 1 2 1 1 1 1 1 1 1 1 1 56.747 55.634 2;3 0.00032819 67833 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 74.46 59.899 166320000 0 40784000 5618900 3759500 5292400 13450000 6916700 7885300 6318900 10792000 13106000 15501000 9089900 9150600 18652000 7680 4634 7016 64353;64354;64355;64356;64357;64358;64359;64360;64361;64362;64363;64364;64365;64366;64367;64368;64369;64370 51024;51025;51026;51027;51028;51029;51030;51031;51032;51033;51034;51035;51036;51037;51038;51039;51040;51041 51031 16 DIQSLPQK Unmodified 927.50255 0.50254598 4357 Q9H223 EHD4 EH domain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 29.446 29.628 2 0.022664 32311 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 60.972 25.771 62502000 0 0 0 6584100 4696700 7772100 0 0 4051800 8263600 0 9006000 7114700 6381500 8631600 7681 4357 7017 64371;64372;64373;64374;64375;64376;64377;64378;64379 51042;51043;51044;51045 51045 4 DIQTLLSR Unmodified 944.5291 0.52909508 1502 P46379 BAG6 Large proline-rich protein BAG6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.602 67.684 2 0.0060988 77470 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 103.74 52.773 326500000 0 0 0 17978000 14900000 24310000 18062000 24423000 15074000 28739000 33058000 41501000 30142000 33480000 44829000 7682 1502 7018 64380;64381;64382;64383;64384;64385;64386;64387;64388;64389;64390;64391 51046;51047;51048;51049;51050;51051;51052;51053;51054;51055;51056;51057;51058 51051 12 DIQTNVYIK Unmodified 1092.5815 0.58152458 1544 P48556 PSMD8 26S proteasome non-ATPase regulatory subunit 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 53.176 52.031 2 0.0061887 59061 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 75.738 45.553 1243200000 15432000 691050000 0 19085000 37450000 43297000 19031000 15960000 16825000 81139000 92685000 110360000 24046000 24133000 52684000 7683 1544 7019 64392;64393;64394;64395;64396;64397;64398;64399;64400;64401;64402;64403;64404;64405;64406 51059;51060;51061;51062;51063;51064;51065;51066;51067;51068;51069;51070;51071;51072;51073;51074;51075 51068 16 DIQYPFLGPVPTR Unmodified 1501.7929 0.79291434 2465 Q14CX7 NAA25 N-alpha-acetyltransferase 25, NatB auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 2 2 2 2 1 2 1 1 86.466 86.584 2;3 2.323E-09 99726 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 115.18 99.604 1556000000 0 0 0 919000 0 5240900 390930000 502580000 547290000 28713000 25104000 48428000 0 0 6838700 7684 2465 7020 64407;64408;64409;64410;64411;64412;64413;64414;64415;64416;64417;64418;64419;64420;64421 51076;51077;51078;51079;51080;51081;51082;51083;51084;51085;51086;51087;51088;51089;51090;51091 51080 15 DIRDLLEEDELLEQK Unmodified 1856.9367 0.93673763 4386 Q9H3S7 PTPN23 Tyrosine-protein phosphatase non-receptor type 23 yes yes 0 0 1 By MS/MS 2 0 1 1 92.741 84.611 3 9.9824E-31 109633 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.34 100.45 15568000 15568000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7685 4386 7021 64422 51092 51092 1 DIRDYNDADMAR Unmodified 1453.6256 0.62559102 2440 Q14696 MESDC2 LDLR chaperone MESD yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 37.374 37.728 3 0.027311 40766 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.189 38.235 33830000 0 0 0 1436700 0 0 0 0 0 0 5162500 8940800 0 4849900 13440000 7686 2440 7022 64423;64424;64425;64426;64427 51093 51093 0 DIRDYNDADMARLLEQWEK Unmodified 2380.1118 0.11175865 2440 Q14696 MESDC2 LDLR chaperone MESD yes yes 0 0 2 By MS/MS 2 0 1 1 95.379 87.248 4 4.3481E-07 112757 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.718 62.246 42047000 42047000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7687 2440 7023 64428 51094 51094 1 DIREEAEK Unmodified 988.48254 0.48253882 1195 P25788 PSMA3 Proteasome subunit alpha type-3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.3 2.1 1 9 1 1 1 1 1 1 1 1 1 1 12.113 11.888 2 0.018887 13385 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 134.66 72.076 337350000 0 200520000 0 0 5280900 5523300 8149400 7461900 5041700 7399200 0 29600000 7621200 0 60744000 7688 1195 7024 64429;64430;64431;64432;64433;64434;64435;64436;64437;64438 51095;51096;51097 51096 0 DIRSDTSGHFER Unmodified 1418.6539 0.65385468 1100 P20073 ANXA7 Annexin A7 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 27.977 28.244 3 0.010992 30220 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 42.568 34.055 74611000 0 0 0 5191600 0 9561300 6790200 0 6224000 0 8603700 14146000 7567900 3970600 12556000 7689 1100 7025 64439;64440;64441;64442;64443;64444;64445;64446;64447 51098;51099;51100 51099 3 DIRTASTEADK Unmodified 1205.5888 0.58879481 1704 P52888 THOP1 Thimet oligopeptidase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 2 3 2 15.416 12.124 2;3 0.00032911 15654 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 99.5 71.295 610900000 37006000 555480000 18416000 0 0 0 0 0 0 0 0 0 0 0 0 7690 1704 7026 64448;64449;64450;64451;64452;64453;64454 51101;51102;51103;51104;51105 51105 3 DIRTASTEADKK Unmodified 1333.6838 0.68375782 1704 P52888 THOP1 Thimet oligopeptidase yes yes 0 0 2 By matching By MS/MS By MS/MS 2 0 3 1 1 1 13.031 9.8464 3 0.0015103 12585 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 76.728 57.629 66660000 15557000 6434500 44669000 0 0 0 0 0 0 0 0 0 0 0 0 7691 1704 7027 64455;64456;64457 51106 51106 0 DISAIEEAMSASLQQHK Unmodified 1856.8938 0.89382695 3733 Q96A65 EXOC4 Exocyst complex component 4 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 90.227 87.847 3 6.0408E-20 109230 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.65 109.31 28343000 0 25749000 0 0 0 0 0 0 0 0 0 0 0 0 2594200 7692 3733 7028 64458;64459 51107;51108;51109 51107 3 DISEASVFDAYVLPK Unmodified 1652.8298 0.82975336 1918 P62854 RPS26 40S ribosomal protein S26 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 90.369 90.441 2 7.8567E-19 104950 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 136.96 121.33 158520000 0 0 0 2275400 9581800 11004000 5850600 10475000 9470600 30231000 15221000 19814000 7572500 9750000 27270000 7693 1918 7029 64460;64461;64462;64463;64464;64465;64466;64467;64468;64469;64470;64471 51110;51111;51112;51113;51114;51115;51116;51117;51118;51119;51120;51121;51122;51123 51111 13 DISEVIALGVPNPR Unmodified 1478.8093 0.80929269 2320 Q13573 SNW1 SNW domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 87.331 87.507 2 5.5598E-13 101290 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 109.66 92.433 4063900 0 0 0 0 0 0 0 0 1782900 0 0 0 0 0 2280900 7694 2320 7030 64472;64473;64474;64475 51124;51125;51126;51127 51125 4 DISLDSELHDLR Unmodified 1411.6943 0.69432251 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 16 1 1 1 2 1 2 1 2 2 1 2 75.817 75.952 2;3 0.00010553 87515 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 72.958 58.723 131260000 0 0 0 0 3832700 10706000 4614200 14808000 9364700 14062000 6732800 16034000 16014000 925460 34171000 7695 2556 7031 64476;64477;64478;64479;64480;64481;64482;64483;64484;64485;64486;64487;64488;64489;64490;64491 51128;51129;51130;51131;51132;51133;51134;51135;51136;51137;51138;51139;51140 51135 9 DISLSDYK Unmodified 939.45493 0.45492709 2131 Q06830 PRDX1 Peroxiredoxin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.16 3.73 5 2 12 2 4 1 1 1 1 1 1 1 1 1 1 1 1 1 51.32 49.336 2 0.0063466 57181 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 101.64 21.181 17026000000 954040000 12920000000 72795000 199970000 98523000 125320000 106280000 150230000 77085000 166180000 455900000 390060000 133760000 329750000 846770000 7696 2131 7032 64492;64493;64494;64495;64496;64497;64498;64499;64500;64501;64502;64503;64504;64505;64506;64507;64508;64509;64510 51141;51142;51143;51144;51145;51146;51147;51148;51149;51150;51151;51152;51153;51154;51155;51156;51157;51158;51159;51160;51161;51162;51163;51164;51165;51166;51167;51168;51169;51170;51171;51172;51173;51174;51175;51176;51177;51178 51168 38 DISNTLIMLADK Oxidation (M) 1348.6908 0.69081704 4140 Q9BTC8 MTA3 Metastasis-associated protein MTA3 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 86.242 86.367 2 0.0011959 100072 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 64.82 29.525 12937000 0 0 0 0 0 1968300 0 2074200 2745600 3940500 0 0 2208700 0 0 7697 4140 7033 64511;64512;64513;64514;64515;64516;64517 51179;51180;51181;51182;51183;51184 51179 5634 6 DISNTLIMLADK Unmodified 1332.6959 0.69590241 4140 Q9BTC8 MTA3 Metastasis-associated protein MTA3 yes yes 0 0 0 By MS/MS 10 0 1 1 89.062 89.205 2 0.016875 103266 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.893 26.784 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7698 4140 7033 64518 51185 51185 1 DISNVGEVSCGSSHTIALSK Unmodified 2059.9844 0.98443288 2573 Q15751 HERC1 Probable E3 ubiquitin-protein ligase HERC1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 64.05 58.709 3 1.4484E-08 75308 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.922 55.45 32900000 0 32900000 0 0 0 0 0 0 0 0 0 0 0 0 0 7699 2573 7034 64519;64520 51186;51187;51188 51186 2 DISQAYYTVYK Unmodified 1349.6503 0.65033243 968 P12429 ANXA3 Annexin A3 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 5.4 3.77 2 1 2 2 1 1 1 67.926 65.257 2 0.00063756 75543 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.584 51.582 363450000 0 337790000 1649100 0 0 0 0 0 0 0 6063600 0 0 0 17942000 7700 968 7035 64521;64522;64523;64524;64525 51189;51190;51191;51192;51193 51191 5 DISQAYYTVYKK Unmodified 1477.7453 0.74529545 968 P12429 ANXA3 Annexin A3 yes yes 0 0 1 By MS/MS 3 0 1 1 61.439 56.655 3 0.018104 69577 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 35.204 29.48 6000500 0 6000500 0 0 0 0 0 0 0 0 0 0 0 0 0 7701 968 7036 64526 51194 51194 1 DISQDSLQDIK Unmodified 1260.6198 0.61976058 5212 Q9Y4X5 ARIH1 E3 ubiquitin-protein ligase ARIH1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 54.409 54.625 2 0.00031904 60953 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 101.38 53.649 189540000 0 0 0 0 12795000 0 13575000 11884000 7551700 18878000 38058000 32475000 0 0 54324000 7702 5212 7037 64527;64528;64529;64530;64531;64532;64533;64534 51195;51196 51195 2 DISQLQIDLTGALGK Unmodified 1570.8566 0.85663681 2933 Q6P3X3 TTC27 Tetratricopeptide repeat protein 27 yes yes 0 0 0 By MS/MS By MS/MS By matching 2.25 0.433 3 1 1 2 1 94.058 89.379 2 0.0018155 108135 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 78.908 32.302 58742000 6874200 50282000 1585800 0 0 0 0 0 0 0 0 0 0 0 0 7703 2933 7038 64535;64536;64537;64538 51197;51198;51199 51198 2 DISSCSQGIK Unmodified 1093.5074 0.50737336 398 O60343 TBC1D4 TBC1 domain family member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 23.03 23.23 2 0.0056762 23420 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.993 32.113 40046000 0 0 0 2826400 2820300 3067600 3179900 1967700 0 3816800 4550900 5103800 5304200 0 7408300 7704 398 7039 64539;64540;64541;64542;64543;64544;64545;64546;64547;64548 51200;51201;51202;51203;51204;51205 51201 6 DISSDAFTALDPLGDK Unmodified 1663.7941 0.79409613 2021 P98082 DAB2 Disabled homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.26 3.23 5 2 24 2 4 1 2 2 2 2 2 2 2 2 2 2 2 2 89.954 88.88 2;3 4.6163E-50 103817 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 168.76 124.57 1224800000 63817000 734840000 2731200 4921200 17293000 23243000 20582000 23490000 27287000 60823000 40231000 31611000 17348000 37529000 119070000 7705 2021 7040 64549;64550;64551;64552;64553;64554;64555;64556;64557;64558;64559;64560;64561;64562;64563;64564;64565;64566;64567;64568;64569;64570;64571;64572;64573;64574;64575;64576;64577;64578;64579 51206;51207;51208;51209;51210;51211;51212;51213;51214;51215;51216;51217;51218;51219;51220;51221;51222;51223;51224;51225;51226;51227;51228;51229;51230;51231;51232;51233;51234;51235;51236;51237;51238;51239;51240;51241;51242;51243;51244;51245 51228 35 DISSSLNSLADSNAR Unmodified 1548.738 0.73797824 583 O94776 MTA2 Metastasis-associated protein MTA2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 70.677 70.739 2 2.5866E-20 81251 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 140.39 114.73 127240000 0 0 0 7529900 8107000 12425000 7718300 10740000 0 17924000 14746000 12799000 9092500 9455100 16699000 7706 583 7041 64580;64581;64582;64583;64584;64585;64586;64587;64588;64589;64590 51246;51247;51248;51249;51250;51251;51252;51253;51254;51255;51256;51257;51258 51251 13 DISSSLNSLADSNAREFEEESK Unmodified 2427.1038 0.10375597 583 O94776 MTA2 Metastasis-associated protein MTA2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 80.736 80.868 3 6.84E-54 93198 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 112.32 107.06 75908000 0 0 0 0 0 5050600 0 4651100 0 12698000 8781000 6417300 2706900 5903300 29699000 7707 583 7042 64591;64592;64593;64594;64595;64596;64597;64598 51259;51260;51261;51262;51263;51264;51265;51266;51267;51268;51269 51261 11 DISSTLIALADK Unmodified 1245.6816 0.68163256 2272 Q13330 MTA1 Metastasis-associated protein MTA1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 89.964 90.072 2 0.0043525 104560 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 57.836 38.565 18161000 0 0 0 0 926130 1637000 1275800 833380 1038000 2562600 1932200 1919500 962620 1645600 3428100 7708 2272 7043 64599;64600;64601;64602;64603;64604;64605;64606;64607;64608;64609 51270;51271;51272;51273 51271 3 DISTLNSGK Unmodified 933.47673 0.47672516 788 P04843 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 22.294 22.532 2 0.0052193 22549 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.906 33.481 126760000 0 0 0 0 7575400 8962100 6335800 7639000 6846500 12891000 15025000 20825000 12546000 12665000 15452000 7709 788 7044 64610;64611;64612;64613;64614;64615;64616;64617;64618;64619;64620 51274;51275;51276;51277;51278;51279;51280;51281;51282 51276 9 DISTNYYASQK Unmodified 1288.5935 0.59354583 1002 P14625 HSP90B1 Endoplasmin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.95 4.02 3 3 1 12 3 3 1 1 1 1 1 1 1 1 1 1 1 1 1 49.106 48.771 2 4.9617E-11 92743 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 153.05 142.81 3549000000 441170000 1656300000 3770400 60333000 65545000 119760000 111800000 78192000 63455000 108590000 151030000 212580000 109990000 109830000 256630000 7710 1002 7045 64621;64622;64623;64624;64625;64626;64627;64628;64629;64630;64631;64632;64633;64634;64635;64636;64637;64638;64639 51283;51284;51285;51286;51287;51288;51289;51290;51291;51292;51293;51294;51295;51296;51297;51298;51299;51300;51301;51302;51303 51292 19 DISTNYYASQKK Unmodified 1416.6885 0.68850885 1002 P14625 HSP90B1 Endoplasmin yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 29.885 30.139 3 0.010252 32341 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 27.005 5.3742 11644000 0 0 0 0 0 0 6087800 0 0 0 5556400 0 0 0 0 7711 1002 7046 64640;64641 51304 51304 1 DISTTLNADEAVAR Unmodified 1474.7264 0.72635092 3633;686 Q92598;O95757 HSPH1;HSPA4L Heat shock protein 105 kDa;Heat shock 70 kDa protein 4L no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 62.516 62.15 2 1.8862E-19 70473 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 136.96 94.766 216510000 0 50853000 0 3683500 5058000 7689700 5795300 6516600 5092900 9712500 22842000 19857000 7176600 14190000 58046000 7712 3633;686 7047 64642;64643;64644;64645;64646;64647;64648;64649;64650;64651;64652;64653;64654 51305;51306;51307;51308;51309;51310;51311;51312;51313;51314;51315;51316;51317;51318;51319 51309 15 DITAEEEEEEVESLK Unmodified 1748.784 0.78398496 4257 Q9BZ23 PANK2 Pantothenate kinase 2, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 2 2 2 1 1 1 73.461 73.315 2;3 2.4184E-129 84511 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 205.07 197.93 394000000 0 0 0 38717000 93028000 93217000 0 0 0 49638000 48808000 70589000 0 0 0 7713 4257 7048 64655;64656;64657;64658;64659;64660;64661;64662;64663 51320;51321;51322;51323;51324;51325;51326;51327 51324 7 DITAEEEQEEVENLK Unmodified 1774.8109 0.81086841 3511 Q8TE04 PANK1 Pantothenate kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 2 2 2 2 2 2 65.675 65.618 2;3 1.936E-112 75099 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 198.81 182.92 271830000 0 0 0 39481000 60804000 53230000 0 0 0 26315000 35089000 56912000 0 0 0 7714 3511 7049 64664;64665;64666;64667;64668;64669;64670;64671;64672;64673;64674;64675 51328;51329;51330;51331;51332;51333;51334;51335 51328 8 DITAELSAPVK Unmodified 1142.6183 0.61830402 2973 Q6ULP2 AFTPH Aftiphilin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 67.346 66.974 2 0.00051485 76271 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.749 53.276 60487000 0 19669000 0 2910900 2227900 2417800 2600600 2911000 2477700 3124300 3819500 5505900 3062600 3728700 6031800 7715 2973 7050 64676;64677;64678;64679;64680;64681;64682;64683;64684;64685;64686;64687;64688 51336;51337;51338;51339;51340;51341;51342;51343;51344 51339 7 DITDPLSLNTCTDEGHVVLASPLK Unmodified 2594.2898 0.2897826 3047 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 2 1 6 2 1 1 1 1 1 1 1 87.853 86.779 3 1.1037E-139 107776 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 199.04 178.62 247160000 0 162830000 3665300 0 0 0 0 5256100 0 17952000 10668000 8065900 0 4904700 33818000 7716 3047 7051 64689;64690;64691;64692;64693;64694;64695;64696;64697 51345;51346;51347;51348;51349;51350;51351;51352;51353;51354 51346 10 DITEEIMSGAR Oxidation (M) 1236.5656 0.56561652 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.71 1.4 1 23 1 2 2 2 2 2 2 2 2 2 1 2 2 52.925 52.854 2 4.5179E-16 60610 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 160.59 106.43 2195100000 0 3999800 0 135090000 137180000 150860000 178490000 142170000 200970000 205120000 165300000 334350000 104050000 191120000 246420000 7717 2102 7052 64698;64699;64700;64701;64702;64703;64704;64705;64706;64707;64708;64709;64710;64711;64712;64713;64714;64715;64716;64717;64718;64719;64720;64721 51355;51356;51357;51358;51359;51360;51361;51362;51363;51364;51365;51366;51367;51368;51369;51370;51371;51372;51373;51374;51375;51376;51377;51378;51379;51380;51381;51382;51383 51381 3400 26 DITEEIMSGAR Unmodified 1220.5707 0.5707019 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74.005 73.513 2 3.1899E-11 84333 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 155.84 72.579 2437700000 0 194820000 3340400 114150000 142110000 152970000 132710000 160490000 134050000 200860000 269300000 264830000 177650000 213910000 276500000 7718 2102 7052 64722;64723;64724;64725;64726;64727;64728;64729;64730;64731;64732;64733;64734;64735 51384;51385;51386;51387;51388;51389;51390;51391;51392;51393;51394;51395;51396;51397;51398;51399 51390 16 DITEEIMSGGGSR Unmodified 1350.6085 0.60854397 329 O43432 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 68.308 68.432 2 0.0028726 78536 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 74.944 52.204 5343000 0 0 0 0 0 0 0 0 0 3125300 0 0 2217800 0 0 7719 329 7053 64736;64737;64738;64739 51400;51401;51402 51402 3 DITELFSQLHVSSKPEK Unmodified 1957.0157 0.015656649 4616 Q9NRY5 FAM114A2 Protein FAM114A2 yes yes 0 0 1 By MS/MS 10 0 1 1 84.405 84.584 3 0.00011004 97678 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.255 38.017 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7720 4616 7054 64740 51403 51403 1 DITGTLSNPEVFNYGVETHEAYK Unmodified 2583.2129 0.21291249 1032 P16083 NQO2 Ribosyldihydronicotinamide dehydrogenase [quinone] yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 5.57 3.85 3 1 3 2 2 1 1 1 83.123 81.359 3 5.858E-239 100490 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 185.71 181.39 1579400000 0 1492000000 47963000 0 0 0 0 0 0 0 4583100 7467200 0 0 27325000 7721 1032 7055 64741;64742;64743;64744;64745;64746;64747 51404;51405;51406;51407;51408;51409;51410;51411 51404 8 DITIHANPFAQ Unmodified 1225.6091 0.60913632 4366 Q9H2H8 PPIL3 Peptidyl-prolyl cis-trans isomerase-like 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 6.12 3.89 3 1 4 1 2 1 1 1 1 1 77.21 74.387 2 3.6562E-09 92394 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.57 126.79 455900000 17256000 421660000 6013900 3149800 4392600 0 0 0 0 0 0 0 3426000 0 0 7722 4366 7056 64748;64749;64750;64751;64752;64753;64754;64755 51412;51413;51414;51415;51416;51417;51418;51419 51413 8 DITLFHAMDTLQR Oxidation (M) 1575.7715 0.77152697 583 O94776 MTA2 Metastasis-associated protein MTA2 yes yes 0 1 0 By MS/MS By MS/MS By matching By matching 10 0 4 1 1 1 1 73.477 73.433 3 0.0010626 84710 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 52.265 40.35 62656000 0 0 0 8322600 0 15962000 0 0 0 22380000 0 15992000 0 0 0 7723 583 7057 64756;64757;64758;64759 51420;51421 51420 741 1 DITLFHAMDTLQR Unmodified 1559.7766 0.77661235 583 O94776 MTA2 Metastasis-associated protein MTA2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 84.064 84.178 3 0.001971 97044 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.666 35.5 16959000 0 0 0 0 0 3178600 0 0 0 0 0 0 0 0 13781000 7724 583 7057 64760;64761 51422;51423 51423 2 DITLTNDK Unmodified 918.46583 0.46582612 1328 P33176 KIF5B Kinesin-1 heavy chain yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 29.486 29.625 2 0.035396 31768 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 96.19 39.644 173250000 0 0 0 0 0 34423000 24073000 19726000 24727000 33096000 0 0 37201000 0 0 7725 1328 7058 64762;64763;64764;64765;64766;64767;64768 51424;51425;51426 51426 1 DITPLQVVLPNTALHLK Unmodified 1871.088 0.088033731 2444 Q14764 MVP Major vault protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 95.456 91.2 3 0.0024284 106504 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.813 33.155 21894000 7976000 11965000 0 0 0 0 0 0 0 0 0 0 0 0 1952700 7726 2444 7059 64769;64770;64771 51427;51428;51429 51428 3 DITSAVQSK Unmodified 947.49238 0.49237523 2433 Q14686 NCOA6 Nuclear receptor coactivator 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 27.884 28.006 2 0.0052093 30204 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 80.219 36.45 149010000 0 0 0 7432900 6105300 0 0 6158700 0 25791000 0 89813000 13705000 0 0 7727 2433 7060 64772;64773;64774;64775;64776;64777;64778 51430;51431;51432;51433;51434 51433 5 DITSDTSGDFR Unmodified 1212.5259 0.5258602 773 P04083 ANXA1 Annexin A1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.045 41.224 2 0.00015988 44847 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 128.36 119.45 557590000 0 0 0 31199000 18387000 43325000 39052000 63357000 17049000 24935000 48547000 71876000 40023000 44770000 115070000 7728 773 7061 64779;64780;64781;64782;64783;64784;64785;64786;64787;64788;64789;64790 51435;51436;51437;51438;51439;51440;51441;51442;51443;51444;51445 51441 8 DITSDTSGDFRNALLSLAK Unmodified 2023.0222 0.02219859 773 P04083 ANXA1 Annexin A1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.33 0.471 2 1 1 1 1 93.648 89.03 3 0.00010582 112426 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.814 36.691 37580000 31954000 4137400 1487900 0 0 0 0 0 0 0 0 0 0 0 0 7729 773 7062 64791;64792;64793 51446;51447;51448 51447 2 DITSLFR Unmodified 850.45487 0.45486751 4024 Q99570 PIK3R4 Phosphoinositide 3-kinase regulatory subunit 4 yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 79.33 79.415 2 0.023669 91274 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.359 41.292 17847000 0 0 0 0 3632500 0 3439100 0 1572900 0 0 0 0 3680200 5522100 7730 4024 7063 64794;64795;64796;64797;64798 51449 51449 1 DITTSADQIAEVK Unmodified 1389.6987 0.69873919 3036 Q76I76 SSH2 Protein phosphatase Slingshot homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 83.147 83.207 2 0.038064 96647 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 44.863 35.506 61948000 0 0 0 1847500 1965900 7836400 2802100 1941200 2566900 0 9144900 8574700 5052100 8303900 11912000 7731 3036 7064 64799;64800;64801;64802;64803;64804;64805;64806;64807;64808;64809 51450 51450 1 DIVAAIQHNYK Unmodified 1270.667 0.66698555 2797 Q5TFE4 NT5DC1 5'-nucleotidase domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 6.87 3.84 5 1 9 1 3 2 1 1 2 1 2 2 61.19 59.011 2;3 1.2353E-35 73673 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 201.58 175.14 363300000 139670000 101900000 83872000 0 1150000 2429300 0 0 0 0 8801800 0 0 6411000 19070000 7732 2797 7065 64810;64811;64812;64813;64814;64815;64816;64817;64818;64819;64820;64821;64822;64823;64824 51451;51452;51453;51454;51455;51456;51457;51458;51459;51460;51461;51462;51463;51464 51460 12 DIVDDNEVRDLISDRNK Unmodified 2014.992 0.99196109 2852 Q68CP9 ARID2 AT-rich interactive domain-containing protein 2 yes yes 0 0 2 By MS/MS 2 0 1 1 80.55 72.419 3 0.00039298 94953 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.565 37.071 53056000 53056000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7733 2852 7066 64825 51465 51465 1 DIVEMLFTQPNIELNQQNK Unmodified 2273.1362 0.13618249 3678 Q92882 OSTF1 Osteoclast-stimulating factor 1 yes yes 0 0 0 By MS/MS 2 0 1 1 98.413 93.678 3 0.00067588 115957 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 24.787 10.174 22914000 0 22914000 0 0 0 0 0 0 0 0 0 0 0 0 0 7734 3678 7067 64826 51466 51466 1 DIVEMLFTQPNIELNQQNK Oxidation (M) 2289.1311 0.13109711 3678 Q92882 OSTF1 Osteoclast-stimulating factor 1 yes yes 0 1 0 By MS/MS 3 0 1 1 93.567 90.328 3 9.0857E-06 108257 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 72.184 63.365 6275700 0 6275700 0 0 0 0 0 0 0 0 0 0 0 0 0 7735 3678 7067 64827 51467 51467 5228 1 DIVENICGR Unmodified 1074.5128 0.51279309 1446 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 48.753 49.099 2 0.0030593 55156 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 127.12 91.499 602860000 0 0 0 0 0 56103000 0 56975000 70802000 57528000 75919000 106270000 87666000 0 91598000 7736 1446 7068 64828;64829;64830;64831;64832;64833;64834;64835 51468;51469;51470;51471;51472 51469 4 DIVENICGREK Unmodified 1331.6503 0.65034921 1446 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 6 4 2 2 1 1 1 1 44.961 42.685 2;3 0.00055406 55367 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.18 71.196 39677000 0 15760000 6124300 0 0 0 0 8093800 9699000 0 0 0 0 0 0 7737 1446 7069 64836;64837;64838;64839 51473;51474;51475 51473 1 DIVENLETQSK Unmodified 1274.6354 0.63541065 2855 Q68CZ6 HAUS3 HAUS augmin-like complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 56.487 56.442 2 0.0010376 64259 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 75.509 45.255 19882000 0 0 0 0 2770400 7115700 5742500 0 0 0 0 0 0 4253500 0 7738 2855 7070 64840;64841;64842;64843;64844;64845;64846;64847 51476;51477;51478;51479;51480;51481;51482 51476 7 DIVENYFMR Oxidation (M) 1201.5438 0.54375887 2262 Q13263 TRIM28 Transcription intermediary factor 1-beta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 71.459 71.467 2 0.011675 81824 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 110.81 89.301 611970000 0 0 0 53094000 47719000 83676000 50691000 0 47383000 87568000 0 0 80066000 68785000 92992000 7739 2262 7071 64848;64849;64850;64851;64852;64853;64854;64855;64856 51483;51484;51485;51486;51487;51488;51489;51490;51491 51487 3681 6 DIVENYFMR Unmodified 1185.5488 0.54884425 2262 Q13263 TRIM28 Transcription intermediary factor 1-beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.134 79.194 2 0.0030095 91519 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 141.78 127.01 461910000 0 0 0 14007000 13662000 36923000 17406000 29841000 27869000 42479000 39834000 46663000 29820000 39142000 124270000 7740 2262 7071 64857;64858;64859;64860;64861;64862;64863;64864;64865;64866;64867;64868 51492;51493;51494;51495;51496;51497;51498;51499;51500;51501;51502 51497 11 DIVENYFMRDSGSK Unmodified 1659.7563 0.75627084 2262 Q13263 TRIM28 Transcription intermediary factor 1-beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 5 1 2 2 77.379 72.738 2;3 1.4342E-06 88852 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 105.14 86.408 225820000 41732000 164230000 19858000 0 0 0 0 0 0 0 0 0 0 0 0 7741 2262 7072 64869;64870;64871;64872;64873 51503;51504;51505;51506;51507 51507 4 DIVENYFMRDSGSK Oxidation (M) 1675.7512 0.75118546 2262 Q13263 TRIM28 Transcription intermediary factor 1-beta yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 70.496 63.428 3 0.0086948 83933 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.481 36.944 72690000 30881000 41809000 0 0 0 0 0 0 0 0 0 0 0 0 0 7742 2262 7072 64874;64875 51508 51508 3681 1 DIVEYAELK Unmodified 1078.5546 0.55464113 3050 Q7L576 CYFIP1 Cytoplasmic FMR1-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.87 3 5 1 1 1 1 1 1 1 1 68.935 66.72 2 0.0076144 83502 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.439 49.193 169110000 7389200 121410000 2239800 2758000 2659400 0 0 0 0 6927500 0 11028000 0 0 14695000 7743 3050 7073 64876;64877;64878;64879;64880;64881;64882;64883 51509;51510;51511;51512;51513;51514;51515 51509 7 DIVGANEK Unmodified 844.42905 0.42904669 2629 Q16719 KYNU Kynureninase yes yes 0 0 0 By MS/MS By MS/MS By matching 2 0 3 1 1 1 17.099 13.699 2 0.0069202 17973 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.3 41.884 552030000 65894000 483450000 2678200 0 0 0 0 0 0 0 0 0 0 0 0 7744 2629 7074 64884;64885;64886 51516;51517 51516 2 DIVHSGLAYTMER Unmodified 1490.7188 0.71876312 721 P00367 GLUD1 Glutamate dehydrogenase 1, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 70.464 70.611 3 0.0013066 80748 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 49.929 43.243 8920100 0 0 0 0 0 0 3168700 3267500 0 2483900 0 0 0 0 0 7745 721 7075 64887;64888;64889 51518 51518 1 DIVPGDIVEIAVGDK Unmodified 1538.8192 0.81918867 1041 P16615 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 93.442 92.273 2 0.00072848 113533 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.856 76.225 99509000 18198000 49551000 1172500 0 2722900 1950500 1756500 1936600 1940600 4462500 3252200 3450700 1686700 2621000 4807300 7746 1041 7076 64890;64891;64892;64893;64894;64895;64896;64897;64898;64899;64900;64901;64902;64903;64904 51519;51520;51521;51522;51523;51524;51525;51526;51527;51528;51529;51530;51531;51532;51533 51522 15 DIVQFVPFR Unmodified 1119.6077 0.60767976 458;3209 O75131;Q96FN4;Q8IYJ1;Q96A23;O95741;Q9HCH3;Q9UBL6;Q86YQ8 CPNE3;CPNE2;CPNE9;CPNE4;CPNE6;CPNE5;CPNE7;CPNE8 Copine-3;Copine-2;Copine-9;Copine-4;Copine-6;Copine-5;Copine-7;Copine-8 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 87.271 87.359 2 0.0030689 101217 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 91.906 76.244 26273000 0 0 0 1734900 0 4264000 0 2237100 1186800 2847200 1892300 2549100 1898100 1473800 6189800 7747 458;3209 7077 64905;64906;64907;64908;64909;64910;64911;64912;64913;64914;64915 51534;51535;51536;51537;51538;51539;51540;51541;51542;51543;51544;51545 51534 12 DIVQFVPYRR Unmodified 1291.7037 0.70370541 4064 Q99829 CPNE1 Copine-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 70.747 70.867 3 0.0020417 81471 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 65.305 50.103 73432000 0 0 0 4078400 0 6493500 1838500 3543600 3600600 3331000 6277800 8406600 4066700 5678900 26116000 7748 4064 7078 64916;64917;64918;64919;64920;64921;64922;64923;64924;64925;64926 51546;51547;51548;51549;51550;51551;51552;51553;51554 51546 9 DIVSLVPR Unmodified 897.52837 0.5283668 670 O95573 ACSL3 Long-chain-fatty-acid--CoA ligase 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 73.197 73.312 2 0.010604 84842 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 79.116 31.267 132530000 0 0 0 0 16605000 10587000 12949000 0 7570500 11047000 20427000 19022000 11508000 10216000 12601000 7749 670 7079 64927;64928;64929;64930;64931;64932;64933;64934;64935;64936 51555;51556;51557;51558;51559;51560;51561;51562;51563 51563 9 DIVVLGVEK Unmodified 970.5699 0.56989727 219 O14818 PSMA7 Proteasome subunit alpha type-7 yes yes 0 0 0 By MS/MS 10 0 1 1 67.072 67.59 2 0.005778 76775 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.827 29.76 16131000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16131000 7750 219 7080 64937 51564 51564 1 DIVVPSLNVAK Unmodified 1153.6707 0.67067394 419 O60645 EXOC3 Exocyst complex component 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 77.879 77.355 2 0.0073765 94700 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.749 60.663 407630000 0 228240000 0 6860700 11388000 13640000 12618000 12823000 10465000 18233000 18734000 21598000 14507000 13192000 25331000 7751 419 7081 64938;64939;64940;64941;64942;64943;64944;64945;64946;64947;64948;64949;64950;64951 51565;51566;51567;51568;51569;51570;51571;51572;51573;51574 51568 10 DIVVQETMEDIDK Unmodified 1533.7232 0.72323938 376 O43852 CALU Calumenin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 76.372 74.992 2 1.4841E-25 86718 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 162.36 142.06 2979000000 288140000 2479700000 8450700 2682700 6282200 0 6095100 9194700 8143600 12895000 32846000 23781000 6317100 23808000 70631000 7752 376 7082 64952;64953;64954;64955;64956;64957;64958;64959;64960;64961;64962;64963;64964;64965;64966;64967;64968 51575;51576;51577;51578;51579;51580;51581;51582;51583;51584;51585;51586;51587;51588;51589;51590;51591;51592;51593 51581 19 DIVVQETMEDIDK Oxidation (M) 1549.7182 0.718154 376 O43852 CALU Calumenin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.42 3.66 6 2 16 3 3 2 2 1 2 1 1 1 2 1 2 2 1 56.986 55.077 2 1.3247E-21 66301 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 145.55 124.09 590480000 66029000 395140000 6340000 7410500 0 2703100 12172000 5340300 4159500 6485200 32823000 15073000 2669800 16973000 17168000 7753 376 7082 64969;64970;64971;64972;64973;64974;64975;64976;64977;64978;64979;64980;64981;64982;64983;64984;64985;64986;64987;64988;64989;64990;64991;64992 51594;51595;51596;51597;51598;51599;51600;51601;51602;51603;51604;51605;51606;51607;51608;51609;51610;51611;51612 51600 476 19 DIVYIGLR Unmodified 947.54402 0.54401687 794 P05089 ARG1 Arginase-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 75.914 75.937 2 0.015722 87674 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 68.422 42.685 93274000 0 0 0 17068000 4549300 7734400 3201000 19672000 5103200 12429000 0 10708000 7792200 5017400 0 7754 794 7083 64993;64994;64995;64996;64997;64998;64999;65000;65001;65002 51613;51614 51613 2 DIYALISDQK Unmodified 1164.6027 0.60265396 1802 P58107 EPPK1 Epiplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 78.236 78.379 2 0.0015959 90873 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 93.649 68.726 13292000 0 0 0 0 0 0 4167600 4856300 0 0 0 0 4268400 0 0 7755 1802 7084 65003;65004;65005 51615;51616;51617 51617 3 DIYGGDYER Unmodified 1086.4618 0.46180338 4257;3511;4466 Q8TE04;Q9BZ23;Q9H999 PANK1;PANK2;PANK3 Pantothenate kinase 1;Pantothenate kinase 2, mitochondrial;Pantothenate kinase 3 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 35.805 35.883 2 0.0041698 39016 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 87.696 77.282 473410000 0 0 0 54420000 93669000 97859000 0 0 0 43766000 59814000 123880000 0 0 0 7756 3511;4257;4466 7085 65006;65007;65008;65009;65010;65011 51618;51619;51620;51621;51622;51623 51620 5 DIYQDLNR Unmodified 1035.4985 0.49852324 1474 P43246 MSH2 DNA mismatch repair protein Msh2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 48.29 49.013 2 0.016586 54316 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.032 42.109 49681000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49681000 7757 1474 7086 65012;65013 51624;51625 51624 2 DIYQDLNRLLK Unmodified 1389.7616 0.76161421 1474 P43246 MSH2 DNA mismatch repair protein Msh2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 93.923 88.763 3 0.0066469 112058 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.624 46.851 21240000 8623900 12205000 410950 0 0 0 0 0 0 0 0 0 0 0 0 7758 1474 7087 65014;65015;65016 51626;51627 51627 2 DIYYNNMEEVCGGEK Unmodified 1819.7393 0.73930015 2869 Q6DD88 ATL3 Atlastin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 61.801 59.097 2 2.5299E-05 69087 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 77.593 65.43 20121000 0 15518000 0 0 0 0 0 0 0 0 0 4602900 0 0 0 7759 2869 7088 65017;65018;65019 51628;51629;51630 51630 3 DKAEEETEEK Unmodified 1206.5252 0.5251915 5249 Q9Y5T5 USP16 Ubiquitin carboxyl-terminal hydrolase 16 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 5.5287 2.2279 2 0.013934 3602 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 106.62 73.726 31808000 0 31808000 0 0 0 0 0 0 0 0 0 0 0 0 0 7760 5249 7089 65020;65021 51631 51631 1 DKDDDEVFEK Unmodified 1238.5303 0.53027687 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.89 2.72 3 1 24 1 2 1 2 2 2 2 2 2 2 2 2 2 2 2 24.509 24.077 2;3 4.8359E-15 26136 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 186.87 186.87 3138400000 266310000 263070000 6211900 155200000 128990000 170940000 162230000 159340000 142040000 213520000 248870000 395250000 263070000 240830000 322550000 7761 2102 7090 65022;65023;65024;65025;65026;65027;65028;65029;65030;65031;65032;65033;65034;65035;65036;65037;65038;65039;65040;65041;65042;65043;65044;65045;65046;65047;65048;65049 51632;51633;51634;51635;51636;51637;51638;51639;51640;51641;51642;51643;51644;51645;51646;51647;51648;51649;51650;51651;51652;51653;51654;51655;51656;51657;51658;51659;51660;51661;51662;51663;51664;51665 51662 26 DKDDELSFMEGAIIYVIK Unmodified 2085.034 0.03400883 3297 Q8IZP0 ABI1 Abl interactor 1 yes yes 0 0 1 By MS/MS By matching 2.33 0.471 2 1 2 1 100.45 94.987 3 3.8495E-20 119244 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 118.72 113.29 72575000 62802000 9772400 0 0 0 0 0 0 0 0 0 0 0 0 0 7762 3297 7091 65050;65051;65052 51666;51667;51668 51668 3 DKDPPIPVAK Unmodified 1078.6023 0.60226003 982 P13667 PDIA4 Protein disulfide-isomerase A4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 36.049 35.858 2 0.025205 44525 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 91.069 54.368 358250000 0 113260000 0 11281000 9990500 7936700 17729000 18601000 11093000 14859000 37622000 23740000 21609000 18500000 52028000 7763 982 7092 65053;65054;65055;65056;65057;65058;65059;65060;65061;65062;65063;65064;65065 51669;51670;51671 51670 1 DKEDQPQGLVPGGAVVVLSGPHR Unmodified 2354.2343 0.23425705 3686 Q92917 GPKOW G patch domain and KOW motifs-containing protein yes yes 0 0 1 By MS/MS 10 0 1 1 77.013 77.299 3 0.044376 88723 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 24.459 20.865 16441000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16441000 7764 3686 7093 65066 51672 51672 0 DKEEIVICDR Unmodified 1275.6129 0.61290107 4609 Q9NRR5 UBQLN4 Ubiquilin-4 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 36.972 37.516 2 0.014476 40972 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 131.28 92.262 27127000 0 0 0 0 0 0 0 0 0 0 0 14932000 12195000 0 0 7765 4609 7094 65067;65068 51673 51673 1 DKEELSFSEVEELFLQTTFDK Unmodified 2533.2112 0.21118115 2269 Q13315 ATM Serine-protein kinase ATM yes yes 0 0 1 By MS/MS 2 0 1 1 101.54 93.406 3 0.00082839 120248 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.515 46.753 6564000 6564000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7766 2269 7095 65069 51674 51674 1 DKEQELSEEDK Unmodified 1348.5994 0.59941907 2252 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.48 3.05 3 2 20 2 3 1 2 1 2 2 1 2 2 2 1 2 2 13.043 12.457 2;3 0.0003206 14066 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 97.163 78.031 209230000 6249900 61989000 0 8470400 16975000 3586000 10136000 6719400 1508800 17841000 19848000 36789000 3845200 7507900 7765700 7767 2252 7096 65070;65071;65072;65073;65074;65075;65076;65077;65078;65079;65080;65081;65082;65083;65084;65085;65086;65087;65088;65089;65090;65091;65092;65093;65094 51675;51676;51677;51678;51679;51680;51681;51682;51683;51684;51685 51680 8 DKGDEEEEGEEKLEEK Unmodified 1891.8171 0.817076 1227 P27824 CANX Calnexin yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.402 24.606 3 0 25814 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 254.05 233.21 225600000 0 0 0 23306000 21312000 7696400 22816000 17551000 8733200 15470000 19192000 23433000 28615000 12892000 24588000 7768 1227 7097 65095;65096;65097;65098;65099;65100;65101;65102;65103;65104;65105;65106 51686;51687;51688;51689;51690;51691;51692;51693;51694;51695;51696 51693 10 DKGEYTLVVK Unmodified 1150.6234 0.6233894 1124 P21333 FLNA Filamin-A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.55 2 2 8 1 3 1 1 1 1 1 1 1 1 44.681 42.985 2;3 0.01737 53508 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 100.02 56.893 233040000 19600000 132600000 0 0 0 0 6716400 8334600 0 5789500 14534000 11634000 8696500 8401300 16733000 7769 1124 7098 65107;65108;65109;65110;65111;65112;65113;65114;65115;65116;65117;65118 51697;51698;51699;51700 51697 3 DKIDGTAEETEEREQATPR Unmodified 2174.0087 0.0087333705 488 O75376 NCOR1 Nuclear receptor corepressor 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 30.582 30.671 3 6.6142E-05 33060 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 69.737 60.918 27408000 0 0 0 3603200 3449600 0 4087400 2427300 2983600 0 0 6206000 4650800 0 0 7770 488 7099 65119;65120;65121;65122;65123;65124;65125 51701;51702;51703 51702 3 DKLELEITDSK Unmodified 1289.6715 0.6714618 430 O60763 USO1 General vesicular transport factor p115 yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 2 2 3 1 60.456 53.802 2;3 1.8471E-08 72506 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 155.33 126.63 30913000 27023000 3890200 0 0 0 0 0 0 0 0 0 0 0 0 0 7771 430 7100 65126;65127;65128;65129 51704;51705;51706 51705 2 DKLPNYEEK Unmodified 1134.5557 0.55570376 4177 Q9BV57 ADI1 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase yes yes 0 0 1 By matching By MS/MS 2.33 0.471 2 1 1 2 28.471 23.734 2 1.0404E-05 31263 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 177.7 140.94 187760000 5043000 182720000 0 0 0 0 0 0 0 0 0 0 0 0 0 7772 4177 7101 65130;65131;65132 51707;51708 51707 2 DKLPQSQLSHQDLQLVK Unmodified 1976.0691 0.069089203 2531 Q15418 RPS6KA1 Ribosomal protein S6 kinase alpha-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 60.001 60.347 3 0.0081857 68721 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 22.435 18.214 24341000 0 0 0 0 0 0 3732500 3539100 0 0 0 10743000 0 0 6325700 7773 2531 7102 65133;65134;65135;65136 51709 51709 1 DKNDYLPLYSSSTK Unmodified 1629.7886 0.78861683 5074 Q9UQR1 ZNF148 Zinc finger protein 148 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 59.637 60.021 3 0.0036972 68486 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 44.252 39.403 10776000 0 0 0 0 0 0 0 4979100 0 0 0 0 0 0 5796900 7774 5074 7103 65137;65138 51710 51710 1 DKPDNFQLFQSPHGK Unmodified 1756.8533 0.85328277 85 CON__Q29443;CON__Q0IIK2 yes no 0 0 1 By MS/MS 2 0 1 1 67.335 59.041 3 0.0010529 79091 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.701 38.45 + 14296000 14296000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7775 85 7104 65139 51711 51711 1 DKPNPQLIYDDEIPSLK Unmodified 1984.0153 0.015322298 5110 Q9Y2L1 DIS3 Exosome complex exonuclease RRP44 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.56 3.86 3 1 5 3 1 1 1 1 1 1 80.464 79.363 3 2.3482E-52 94577 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 110.56 93.874 423900000 0 347230000 12588000 0 0 22982000 0 10107000 9132300 16182000 0 0 5675100 0 0 7776 5110 7105 65140;65141;65142;65143;65144;65145;65146;65147;65148 51712;51713;51714;51715;51716;51717;51718;51719;51720;51721;51722 51718 11 DKPPDFAYLASK Unmodified 1350.682 0.68196691 3178 Q86W50 METTL16 Methyltransferase-like protein 16 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 68.248 63.442 3 0.022222 80863 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 45.207 35.254 35864000 0 33384000 2479900 0 0 0 0 0 0 0 0 0 0 0 0 7777 3178 7106 65149;65150 51723 51723 1 DKPPLTDIGVLYEGK Unmodified 1643.877 0.8770379 2830 Q5VZ89 DENND4C DENN domain-containing protein 4C yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.026 79.084 3 0.018075 91362 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 31.089 24.402 135800000 0 0 0 4234100 5676600 11174000 8062900 10933000 10525000 13479000 11571000 21117000 10277000 11742000 17010000 7778 2830 7107 65151;65152;65153;65154;65155;65156;65157;65158;65159;65160;65161;65162 51724 51724 1 DKPSGDTAAVFEEGGDVDDLLDMI Oxidation (M) 2524.1163 0.11629449 974 P13010 XRCC5 X-ray repair cross-complementing protein 5 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 1 3 2 97.187 93.108 2;3 3.294E-125 114890 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 186.43 174.64 173610000 92134000 66004000 15469000 0 0 0 0 0 0 0 0 0 0 0 0 7779 974 7108 65163;65164;65165;65166;65167;65168 51725;51726;51727;51728;51729;51730;51731;51732 51726 1294 8 DKPSGDTAAVFEEGGDVDDLLDMI Unmodified 2508.1214 0.12137987 974 P13010 XRCC5 X-ray repair cross-complementing protein 5 yes yes 0 0 1 By MS/MS By MS/MS 2.4 0.49 3 2 3 2 99.816 94.886 2;3 1.275E-12 118599 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.428 76.879 184530000 92753000 91777000 0 0 0 0 0 0 0 0 0 0 0 0 0 7780 974 7108 65169;65170;65171;65172;65173 51733;51734;51735 51735 2 DKPSVEPVEEYDYEDLK Unmodified 2053.9368 0.93679721 5184 Q9Y450 HBS1L HBS1-like protein yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 67.249 67.322 3 0.0020429 76586 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.539 40.635 74846000 0 0 0 3150400 2777800 7043200 4528900 5044400 0 7497400 8231600 9461600 5457600 8250700 13402000 7781 5184 7109 65174;65175;65176;65177;65178;65179;65180;65181;65182;65183;65184 51736;51737;51738;51739 51736 2 DKPTETLLNTVK Unmodified 1357.7453 0.74529545 3991 Q96SI9 STRBP Spermatid perinuclear RNA-binding protein yes yes 0 0 1 By MS/MS 3 0 1 1 61.044 56.242 2 0.047187 69348 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 73.885 60.294 6188900 0 6188900 0 0 0 0 0 0 0 0 0 0 0 0 0 7782 3991 7110 65185 51740 51740 0 DKPTHEILQK Unmodified 1207.6561 0.65608651 3711 Q93100 PHKB Phosphorylase b kinase regulatory subunit beta yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 22.253 17.864 3 0.0058235 25443 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.2 46.764 154130000 142980000 11158000 0 0 0 0 0 0 0 0 0 0 0 0 0 7783 3711 7111 65186;65187 51741 51741 1 DKPTYDEIFYTLSPVNGK Unmodified 2086.0259 0.025886985 4403 Q9H4M9 EHD1 EH domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS 6.5 3.5 1 1 1 1 87.705 86.183 3 0.0038186 103074 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 42.633 33.587 14154000 0 7951800 0 0 0 0 0 0 0 0 0 0 0 0 6202300 7784 4403 7112 65188;65189 51742;51743 51743 1 DKPVAPSNVLSMAQLR Unmodified 1724.9243 0.92433922 4683 Q9NVU0 POLR3E DNA-directed RNA polymerase III subunit RPC5 yes yes 0 0 1 By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 78.518 78.652 3 0.015947 90536 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 30.974 22.606 23213000 0 0 0 0 0 2590500 0 2335800 0 0 0 5165200 4215200 3605800 5300200 7785 4683 7113 65190;65191;65192;65193;65194;65195 51744 51744 1 DKPVPLPAPEMTVK Oxidation (M) 1536.8222 0.82216556 4326 Q9H0E9 BRD8 Bromodomain-containing protein 8 yes yes 0 1 1 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 52.323 52.372 3 0.0020738 59035 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 43.813 23.386 74039000 0 0 0 11074000 5932300 12558000 0 0 5578900 13411000 10725000 14759000 0 0 0 7786 4326 7114 65196;65197;65198;65199;65200;65201;65202 51745 51745 5791 1 DKPVPLPAPEMTVK Unmodified 1520.8273 0.82725094 4326 Q9H0E9 BRD8 Bromodomain-containing protein 8 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 1 2 2 1 2 2 2 2 1 2 67.274 67.352 2;3 0.00025639 76923 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 56.527 48.483 165070000 0 0 0 7564500 9573000 10767000 11418000 11880000 10159000 11476000 17817000 17186000 15244000 10708000 31279000 7787 4326 7114 65203;65204;65205;65206;65207;65208;65209;65210;65211;65212;65213;65214;65215;65216;65217;65218;65219;65220;65221;65222;65223 51746;51747;51748;51749;51750;51751;51752;51753;51754;51755;51756;51757;51758 51751 12 DKPVTGEQIEVFANK Unmodified 1673.8625 0.86245047 3839 Q96FV9 THOC1 THO complex subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 60.876 60.98 2;3 3.9634E-06 68763 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.578 71.634 235350000 0 0 0 10037000 11040000 12151000 15772000 15705000 11315000 21052000 23596000 33458000 22835000 21125000 37260000 7788 3839 7115 65224;65225;65226;65227;65228;65229;65230;65231;65232;65233;65234;65235;65236;65237;65238;65239;65240;65241;65242;65243;65244;65245;65246;65247 51759;51760;51761;51762;51763;51764;51765;51766;51767;51768;51769;51770;51771;51772 51763 12 DKQDEEQRLK Unmodified 1287.6419 0.64189301 1225 P27797 CALR Calreticulin yes yes 0 0 2 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 3 6 1 2 1 1 1 1 1 1 7.2018 6.3462 2;3 1.1352E-12 7124 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 186.41 161.59 441020000 19976000 0 239790000 0 26977000 18269000 27047000 38487000 26765000 43713000 0 0 0 0 0 7789 1225 7116 65248;65249;65250;65251;65252;65253;65254;65255;65256 51773;51774;51775;51776;51777;51778;51779 51778 5 DKQELEDFIK Unmodified 1263.6347 0.63468237 2510 Q15276 RABEP1 Rab GTPase-binding effector protein 1 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 68.848 63.571 2 0.011011 81222 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.11 67.662 30261000 0 30261000 0 0 0 0 0 0 0 0 0 0 0 0 0 7790 2510 7117 65257;65258 51780 51780 1 DKQPYEQK Unmodified 1034.5033 0.50327426 1207 P26583 HMGB2 High mobility group protein B2 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 6.984 3.6833 2 0.017494 5740 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 175.91 109.83 53856000 0 53856000 0 0 0 0 0 0 0 0 0 0 0 0 0 7791 1207 7118 65259;65260 51781 51781 1 DKVDVASVIVTK Unmodified 1272.7289 0.7289171 1826 P61011 SRP54 Signal recognition particle 54 kDa protein yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 58.309 58.333 2 0.027935 66440 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 69.672 54.998 42073000 0 0 0 3886300 3323200 0 5526700 6207000 0 4086300 5350400 13693000 0 0 0 7792 1826 7119 65261;65262;65263;65264;65265;65266;65267 51782 51782 0 DKYENEDLIK Unmodified 1265.6139 0.61394692 3185 Q86WR0 CCDC25 Coiled-coil domain-containing protein 25 yes yes 0 0 1 By matching By MS/MS 2.5 0.5 2 2 1 3 40.695 35.416 2;3 0.0046756 44240 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 113.93 94.165 106420000 9938000 96485000 0 0 0 0 0 0 0 0 0 0 0 0 0 7793 3185 7120 65268;65269;65270;65271 51783;51784;51785 51784 0 DKYESLVEK Unmodified 1109.5605 0.56045479 1223 P27707 DCK Deoxycytidine kinase yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 37.14 32.382 2 0.0031566 42495 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.96 70.79 49260000 0 49260000 0 0 0 0 0 0 0 0 0 0 0 0 0 7794 1223 7121 65272;65273 51786 51786 1 DKYPNLQVIGGNVVTAAQAK Unmodified 2085.1219 0.12185306 964 P12268 IMPDH2 Inosine-5'-monophosphate dehydrogenase 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 78.765 78.95 3 6.1651E-10 90888 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.631 71.816 47555000 0 0 0 0 0 0 0 5133800 0 0 12534000 8746400 0 5843600 15298000 7795 964 7122 65274;65275;65276;65277;65278 51787;51788;51789;51790 51787 4 DLAAAAAQGPQLPPPQAQPQPSGTGGGVSGQDRYDR Unmodified 3557.7247 0.7247348 3213 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 1 2 2 3 2 2 2 2 2 2 1 69.071 69.159 3;4 3.0521E-61 78740 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.458 74.402 195540000 0 0 0 9861200 8389100 15127000 15510000 17968000 16236000 17005000 24232000 26543000 20196000 15901000 8568500 7796 3213 7123 65279;65280;65281;65282;65283;65284;65285;65286;65287;65288;65289;65290;65291;65292;65293;65294;65295;65296;65297;65298;65299;65300;65301 51791;51792;51793;51794;51795;51796;51797;51798;51799;51800;51801;51802;51803;51804;51805;51806;51807;51808;51809;51810;51811;51812;51813;51814;51815;51816;51817;51818;51819;51820;51821;51822;51823;51824;51825 51799 35 DLADELALVDVIEDK Unmodified 1656.8458 0.84579735 719 P00338 LDHA L-lactate dehydrogenase A chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2.63 1.69 1 43 18 3 22 28 12 1 2 101.83 97.491 2;3 4.4958E-56 114725 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 188.29 162.9 36975000000 19834000000 14786000000 2295100000 0 0 0 0 0 0 0 9560700 0 0 0 50503000 7797 719 7124 65302;65303;65304;65305;65306;65307;65308;65309;65310;65311;65312;65313;65314;65315;65316;65317;65318;65319;65320;65321;65322;65323;65324;65325;65326;65327;65328;65329;65330;65331;65332;65333;65334;65335;65336;65337;65338;65339;65340;65341;65342;65343;65344;65345;65346;65347;65348;65349;65350;65351;65352;65353;65354;65355;65356;65357;65358;65359;65360;65361;65362;65363;65364;65365;65366 51826;51827;51828;51829;51830;51831;51832;51833;51834;51835;51836;51837;51838;51839;51840;51841;51842;51843;51844;51845;51846;51847;51848;51849;51850;51851;51852;51853;51854;51855;51856;51857;51858;51859;51860;51861;51862;51863;51864;51865;51866;51867;51868;51869;51870;51871;51872;51873;51874;51875;51876;51877;51878;51879;51880;51881;51882;51883;51884;51885;51886;51887;51888;51889;51890;51891;51892;51893;51894;51895;51896;51897;51898;51899;51900;51901;51902;51903;51904;51905;51906;51907;51908;51909;51910;51911;51912;51913;51914;51915;51916;51917;51918;51919;51920;51921;51922;51923;51924 51865 93 DLAEDAPWK Unmodified 1043.4924 0.49237523 1124;487 P21333;O75369 FLNA;FLNB Filamin-A;Filamin-B no no 0 0 0 By matching By MS/MS 2 0 2 1 1 66.364 59.257 2 0.0074649 76307 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.492 70.598 678100000 35580000 642520000 0 0 0 0 0 0 0 0 0 0 0 0 0 7798 1124;487 7125 65367;65368 51925 51925 1 DLAEDAPWKK Unmodified 1171.5873 0.58733824 1124;487 P21333;O75369 FLNA;FLNB Filamin-A;Filamin-B no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.08 4 1 21 1 3 1 1 2 2 2 1 2 2 2 1 2 2 2 50.623 49.657 2;3 0.0016807 56870 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 68.657 62.624 839610000 60870000 309860000 14846000 11011000 21810000 30928000 39102000 15547000 20252000 36964000 64404000 31991000 43262000 38237000 100520000 7799 1124;487 7126 65369;65370;65371;65372;65373;65374;65375;65376;65377;65378;65379;65380;65381;65382;65383;65384;65385;65386;65387;65388;65389;65390;65391;65392;65393;65394 51926;51927;51928;51929;51930;51931;51932;51933;51934;51935;51936;51937;51938 51936 7 DLAEDLYDGQVLQK Unmodified 1605.7886 0.78861683 4665 Q9NVD7 PARVA Alpha-parvin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.56 3.03 4 1 22 1 2 2 1 2 2 2 2 2 2 1 2 2 2 2 81.044 80.324 2;3 3.5376E-19 93518 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 164.64 148.75 382560000 20003000 144370000 5291200 2947400 9229900 25948000 12136000 17105000 13390000 28198000 14288000 20632000 12941000 17659000 38419000 7800 4665 7127 65395;65396;65397;65398;65399;65400;65401;65402;65403;65404;65405;65406;65407;65408;65409;65410;65411;65412;65413;65414;65415;65416;65417;65418;65419;65420;65421 51939;51940;51941;51942;51943;51944;51945;51946;51947;51948;51949;51950;51951;51952;51953;51954 51953 16 DLAEFVISLAEK Unmodified 1333.7129 0.71293269 2414 Q14562 DHX8 ATP-dependent RNA helicase DHX8 yes yes 0 0 0 By MS/MS 2 0 1 1 101.69 93.563 2 0.0067842 120434 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.31 64.524 3727500 3727500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7801 2414 7128 65422 51955 51955 1 DLAEIGIAVGNNDVK Unmodified 1526.794 0.79403655 1328 P33176 KIF5B Kinesin-1 heavy chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 7.12 3.72 4 2 10 2 3 1 1 1 1 1 1 1 1 1 1 1 79.521 77.884 2;3 1.566E-57 96994 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 173.37 137.72 414570000 27993000 281510000 8850100 0 8046800 8153700 6521100 6371900 0 10971000 13970000 9742700 5603000 12097000 14736000 7802 1328 7129 65423;65424;65425;65426;65427;65428;65429;65430;65431;65432;65433;65434;65435;65436;65437;65438 51956;51957;51958;51959;51960;51961;51962;51963;51964;51965;51966 51962 9 DLAEVGEGGGHSQAR Unmodified 1481.6859 0.68588309 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 26 2 2 2 2 2 2 3 2 3 2 2 2 23.821 24.042 2;3 3.5883E-19 24681 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 108.89 93.137 449260000 0 0 0 39547000 25615000 28478000 32411000 30317000 25246000 45642000 44224000 50909000 40109000 31866000 54892000 7803 4285 7130 65439;65440;65441;65442;65443;65444;65445;65446;65447;65448;65449;65450;65451;65452;65453;65454;65455;65456;65457;65458;65459;65460;65461;65462;65463;65464 51967;51968;51969;51970;51971;51972;51973;51974;51975;51976;51977;51978;51979;51980;51981;51982;51983 51981 12 DLAEVGEGGGHSQARESGVGQTDWSGVEAGEFLK Unmodified 3458.5975 0.5974686 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 1 By MS/MS 2 0 1 1 85.513 77.383 4 2.8475E-06 100942 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.921 38.435 11692000 11692000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7804 4285 7131 65465 51984 51984 1 DLAEWLEK Unmodified 1002.5022 0.50221163 2231 Q13085 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.532 80.593 2 0.048162 93238 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 47.574 23.717 29873000 0 0 0 1065000 886030 3320500 1147500 2178600 1265500 3341200 2276200 3160000 2032700 2887900 6312100 7805 2231 7132 65466;65467;65468;65469;65470;65471;65472;65473;65474;65475;65476;65477 51985 51985 1 DLAFTLEER Unmodified 1092.5451 0.54513908 1534 P48163 ME1 NADP-dependent malic enzyme yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 74.09 74.105 2 0.014345 86036 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 58.433 42.818 14837000 0 0 0 2658400 0 0 0 0 0 0 0 3908100 0 0 8270800 7806 1534 7133 65478;65479;65480 51986;51987 51987 2 DLAGAEEFGGGEEGTGLTGIK Unmodified 2006.9433 0.94327957 4698 Q9NWK9 ZNHIT6 Box C/D snoRNA protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 2 1 2 1 77.509 77.628 2 4.8997E-44 89756 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 113.35 84.541 21349000 0 0 0 0 0 5109100 0 0 5130200 0 0 11110000 0 0 0 7807 4698 7134 65481;65482;65483;65484;65485;65486 51988;51989;51990;51991 51988 4 DLAGAPPGEVVGCFTPQSR Unmodified 1956.9364 0.93636047 5182 Q9Y446 PKP3 Plakophilin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 77.982 77.972 2 9.8956E-06 90135 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 77.527 71.091 45058000 0 0 0 5037400 5417500 6557500 4606500 5810600 4438100 7711800 0 0 5478800 0 0 7808 5182 7135 65487;65488;65489;65490;65491;65492;65493;65494 51992;51993;51994;51995;51996;51997;51998;51999;52000 51993 9 DLAGCIHGLSNVK Unmodified 1382.6976 0.69763375 1553 P48735 IDH2 Isocitrate dehydrogenase [NADP], mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 70.81 64.865 3 0.0054802 85853 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.789 18.938 7720300 6275700 0 1444600 0 0 0 0 0 0 0 0 0 0 0 0 7809 1553 7136 65495;65496 52001 52001 1 DLAGSIIGK Unmodified 872.49673 0.49673232 1868 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 6 2 24 2 4 2 2 2 2 2 2 2 2 2 2 2 2 2 60.542 59.204 1;2 0.0023553 71624 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 127.56 40.242 12910000000 377210000 7958100000 193690000 212780000 163500000 353300000 303550000 216870000 219040000 467890000 439250000 534870000 330790000 403800000 735560000 7810 1868 7137 65497;65498;65499;65500;65501;65502;65503;65504;65505;65506;65507;65508;65509;65510;65511;65512;65513;65514;65515;65516;65517;65518;65519;65520;65521;65522;65523;65524;65525;65526;65527;65528 52002;52003;52004;52005;52006;52007;52008;52009;52010;52011;52012;52013;52014 52009 10 DLAHFPAVDPEK Unmodified 1337.6616 0.66156582 2978 Q6UW63 KDELC1 KDEL motif-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 65.411 65.444 3 0.0058723 74278 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.107 34.325 20612000 0 0 0 1662400 2077300 2316300 2404800 0 0 0 2801800 3518500 0 0 5831300 7811 2978 7138 65529;65530;65531;65532;65533;65534;65535 52015 52015 1 DLAHTPSQLEGLDPATEAR Unmodified 2019.9861 0.98614743 555 O75909 CCNK Cyclin-K yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 73.454 73.186 3 0.0029012 84831 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 36.053 25.857 45650000 0 0 0 13172000 17994000 0 14484000 0 0 0 0 0 0 0 0 7812 555 7139 65536;65537;65538 52016 52016 1 DLAMADLEQK Unmodified 1132.5434 0.54342452 2211 Q12933 TRAF2 TNF receptor-associated factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 59.37 58.867 2 0.0096087 73027 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.1 50.363 157990000 0 129070000 0 1629400 1190600 3481100 0 2783100 0 3821000 4164000 4528000 0 2678900 4652000 7813 2211 7140 65539;65540;65541;65542;65543;65544;65545;65546;65547;65548 52017;52018;52019;52020;52021 52019 5 DLAMADLEQK Oxidation (M) 1148.5383 0.53833914 2211 Q12933 TRAF2 TNF receptor-associated factor 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.86 3.4 1 1 5 2 1 1 1 1 1 39.244 37.767 2 0.0083905 42686 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 51.949 30.649 50610000 0 35170000 0 0 3268900 0 0 0 0 3362900 2905200 5902400 0 0 0 7814 2211 7140 65549;65550;65551;65552;65553;65554;65555 52022;52023;52024;52025;52026 52023 3601 5 DLANIAEVEVSIPAK Unmodified 1567.8457 0.84573777 2033 Q00341 HDLBP Vigilin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.17 3.85 4 2 6 3 2 1 1 1 1 1 1 1 86.524 84.289 2;3 1.8455E-22 105121 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 120.53 96.237 176980000 72056000 41115000 24120000 0 0 0 0 0 3947000 8997600 6401500 5269600 0 6064700 9005400 7815 2033 7141 65556;65557;65558;65559;65560;65561;65562;65563;65564;65565;65566;65567 52027;52028;52029;52030;52031;52032;52033;52034;52035;52036;52037;52038 52034 10 DLANLEVPHELPTK Unmodified 1574.8304 0.83042206 3594 Q8WXI9 GATAD2B Transcriptional repressor p66-beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.61 2.99 4 1 23 2 2 1 1 2 2 2 2 2 2 2 2 2 2 2 75.602 74.993 2;3 1.5982E-12 86705 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 105.17 80.316 1135500000 14889000 555320000 14219000 17197000 29741000 47222000 31987000 41691000 37677000 63135000 49927000 64728000 40553000 47351000 79831000 7816 3594 7142 65568;65569;65570;65571;65572;65573;65574;65575;65576;65577;65578;65579;65580;65581;65582;65583;65584;65585;65586;65587;65588;65589;65590;65591;65592;65593;65594;65595 52039;52040;52041;52042;52043;52044;52045;52046;52047;52048;52049;52050;52051;52052;52053;52054;52055;52056;52057;52058;52059;52060 52051 20 DLAPGIADSLR Unmodified 1126.5982 0.59823728 4479 Q9H9Y6 POLR1B DNA-directed RNA polymerase I subunit RPA2 yes yes 0 0 0 By matching By matching By MS/MS By matching By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 70.186 70.151 2 0.0043662 80846 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 61.65 44.554 33786000 0 0 0 2839200 4363100 5990400 5803200 0 4010100 0 0 6301200 0 4479200 0 7817 4479 7143 65596;65597;65598;65599;65600;65601;65602 52061;52062 52061 1 DLAPIGIR Unmodified 853.50215 0.50215205 4051 Q99714 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.197 62.296 2 0.022888 70940 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 60.788 9.822 100750000 0 0 0 4723800 3290900 5737500 4361000 6147200 3014400 10201000 12275000 16687000 6441800 7688900 20182000 7818 4051 7144 65603;65604;65605;65606;65607;65608;65609;65610;65611;65612;65613;65614 52063;52064;52065;52066;52067 52065 5 DLAPYLPSVTPGLK Unmodified 1469.813 0.81298108 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 86.531 85.881 2 2.0272E-16 99750 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 121.08 103.21 1426000000 0 805790000 7650700 17730000 36162000 48758000 35818000 40974000 40481000 72662000 59808000 84064000 39665000 56950000 79440000 7819 3641 7145 65615;65616;65617;65618;65619;65620;65621;65622;65623;65624;65625;65626;65627;65628;65629 52068;52069;52070;52071;52072;52073;52074;52075;52076;52077;52078;52079;52080;52081;52082;52083;52084 52077 17 DLAQALINR Unmodified 1012.5665 0.56654322 1497 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 69.114 69.268 2 0.016428 79797 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 56.547 34.416 5357100 0 0 0 0 0 0 0 0 0 0 0 0 2965300 2391800 0 7820 1497 7146 65630;65631 52085;52086 52086 2 DLAQINDLQAQLEEANK Unmodified 1911.9538 0.95378467 3639 Q92614 MYO18A Unconventional myosin-XVIIIa yes yes 0 0 0 By MS/MS 10 0 1 1 83.975 84.075 2 0.024441 97384 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 56.122 46.934 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7821 3639 7147 65632 52087 52087 1 DLAQYDAAHHEEFK Unmodified 1672.7481 0.74814899 2082 Q02818 NUCB1 Nucleobindin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 1 1 2 2 1 1 1 1 1 2 2 41.168 41.379 3;4 0.00054294 45301 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 57.288 53.684 207210000 0 0 0 7459100 6473000 14195000 10641000 15521000 8054000 10947000 17334000 38877000 13669000 20310000 43732000 7822 2082 7148 65633;65634;65635;65636;65637;65638;65639;65640;65641;65642;65643;65644;65645;65646;65647;65648 52088;52089;52090;52091;52092;52093;52094;52095;52096;52097;52098;52099;52100 52095 12 DLARPGEITQSQAFDFEFTHVEK Unmodified 2664.282 0.2819951 2683 Q4G0F5 VPS26B Vacuolar protein sorting-associated protein 26B yes yes 0 0 1 By MS/MS 2 0 1 1 88.077 79.946 4 0.00037128 104034 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.373 51.013 11773000 11773000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7823 2683 7149 65649 52101 52101 1 DLASVNNLLK Unmodified 1085.6081 0.60807369 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.56 3 2 1 13 2 1 1 1 1 1 2 1 1 1 1 1 1 1 76.626 76.014 2 0.001575 87243 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.429 53.16 1768100000 0 1518700000 10386000 9345000 9823300 20621000 13797000 14470000 9414900 21643000 29265000 30588000 12121000 21305000 46575000 7824 2344 7150 65650;65651;65652;65653;65654;65655;65656;65657;65658;65659;65660;65661;65662;65663;65664;65665 52102;52103;52104;52105;52106;52107;52108;52109;52110;52111;52112;52113;52114;52115;52116 52106 14 DLATPSEAK Unmodified 930.46583 0.46582612 3657 Q92766 RREB1 Ras-responsive element-binding protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 21.551 21.716 2 0.021454 22465 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 52.255 4.512 32439000 0 0 0 0 0 0 0 32439000 0 0 0 0 0 0 0 7825 3657 7151 65666 52117 52117 1 DLATVAFCDAQSTQEIHEK Unmodified 2161.995 0.99499756 1786 P56545 CTBP2 C-terminal-binding protein 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 75.52 75.312 2;3 2.3046E-31 86863 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 87.16 83.772 137750000 0 4352400 0 1889100 4322500 10739000 9103100 4955500 6184800 13537000 13143000 15621000 5053700 12430000 36414000 7826 1786 7152 65667;65668;65669;65670;65671;65672;65673;65674;65675;65676;65677;65678;65679 52118;52119;52120;52121;52122;52123;52124;52125;52126;52127;52128 52118 11 DLAVAGPEMQVK Unmodified 1256.6435 0.64347291 2444 Q14764 MVP Major vault protein yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 62.488 62.228 2 0.024991 71941 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 63.283 28.751 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7827 2444 7153 65680;65681 52129;52130 52130 2 DLAVDLIEK Unmodified 1014.5597 0.55972651 297 O43149 ZZEF1 Zinc finger ZZ-type and EF-hand domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 1 3 78.66 73.38 2 0.005822 93071 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.91 46.015 45538000 3481900 42056000 0 0 0 0 0 0 0 0 0 0 0 0 0 7828 297 7154 65682;65683;65684;65685 52131;52132;52133 52131 3 DLAVVTQSAEAPAEEDLLGPNCYYDK Unmodified 2867.3171 0.31711956 4218 Q9BX40 LSM14B Protein LSM14 homolog B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 7 3.69 1 1 3 2 1 1 1 87.084 85.562 3 2.1971E-31 104716 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.676 70.261 41152000 0 25456000 0 0 0 0 0 0 0 7060800 3721200 0 0 0 4914100 7829 4218 7155 65686;65687;65688;65689;65690 52134;52135;52136;52137;52138 52135 5 DLAYCVSQLPLTER Unmodified 1663.824 0.82395647 2476 Q15021 NCAPD2 Condensin complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 82.721 82.825 2 8.6276E-08 95090 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 110.86 89.987 41278000 0 0 0 0 2206000 2964800 1841100 2532100 1397300 4511300 3345800 4668000 2025600 5306900 10479000 7830 2476 7156 65691;65692;65693;65694;65695;65696;65697;65698;65699;65700;65701 52139;52140;52141;52142;52143;52144;52145;52146;52147;52148 52146 10 DLCNTHLMR Unmodified 1158.5274 0.5273973 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.602 36.784 3 0.011616 40650 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 54.982 45.624 67762000 0 0 0 2313700 3674600 3448900 4006400 4716900 2343600 4503000 5100600 7286800 6702000 8682900 14983000 7831 1986 7157 65702;65703;65704;65705;65706;65707;65708;65709;65710;65711;65712;65713 52149;52150;52151;52152;52153 52153 5 DLCPSEGESDAEAESK Unmodified 1722.689 0.68903872 255 O15119 TBX3 T-box transcription factor TBX3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.461 33.647 2 1.4702E-27 36560 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 152.47 149.52 78040000 0 0 0 3160200 4308000 4833000 4259500 5373800 4480800 8840600 9146000 9810700 10204000 5427500 8195300 7832 255 7158 65714;65715;65716;65717;65718;65719;65720;65721;65722;65723;65724;65725 52154;52155;52156;52157;52158;52159;52160;52161;52162;52163;52164;52165 52163 12 DLCSITVSGEEIPNMPPEMQLK Oxidation (M) 2503.1644 0.16444743 3696 Q92990 GLMN Glomulin yes yes 0 1 0 By MS/MS By MS/MS 2.67 0.471 1 2 1 2 86.32 82.439 3 0.00074208 102372 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 46.833 38.545 40442000 1048900 39394000 0 0 0 0 0 0 0 0 0 0 0 0 0 7833 3696 7159 65726;65727;65728 52166 52166 5264 1 DLCSITVSGEEIPNMPPEMQLK Unmodified 2487.1695 0.16953281 3696 Q92990 GLMN Glomulin yes yes 0 0 0 By MS/MS 2 0 2 2 92.902 87.991 2;3 1.4376E-49 109265 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 169.04 142.92 53947000 0 53947000 0 0 0 0 0 0 0 0 0 0 0 0 0 7834 3696 7159 65729;65730 52167;52168 52168 2 DLDADREVTFLEASR Unmodified 1735.8377 0.83769228 1103 P20338 RAB4A Ras-related protein Rab-4A yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 76.049 76.26 3 0.0020041 87393 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.618 34.572 36963000 0 0 0 0 0 0 0 2310900 3172700 0 5954600 11022000 0 0 14502000 7835 1103 7160 65731;65732;65733;65734;65735 52169;52170;52171;52172 52169 4 DLDAECLHR Unmodified 1127.503 0.50295669 99 Q6KB66;CON__Q6KB66-1 KRT80 Keratin, type II cytoskeletal 80 yes no 0 0 0 By MS/MS 10 0 1 1 33.362 32.954 2 0.021188 36373 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 52.482 26.745 + 7680400 0 0 0 7680400 0 0 0 0 0 0 0 0 0 0 0 7836 99 7161 65736 52173 52173 1 DLDAECLHRTELETK Unmodified 1828.8625 0.86252683 99 Q6KB66;CON__Q6KB66-1 KRT80 Keratin, type II cytoskeletal 80 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 2 2 1 1 1 2 2 1 47.019 47.112 3;4 2.5688E-07 53148 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 88.561 51.006 + 89856000 0 0 0 36265000 0 8997100 3016800 3314800 0 9359200 9377000 0 14889000 4637200 0 7837 99 7162 65737;65738;65739;65740;65741;65742;65743;65744;65745;65746;65747;65748 52174;52175;52176;52177;52178;52179;52180 52178 7 DLDAFENETAK Unmodified 1251.5619 0.56191135 3184 Q86WJ1 CHD1L Chromodomain-helicase-DNA-binding protein 1-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 52.307 50.839 2 4.9954E-09 63488 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.6 119.69 54904000 0 41096000 0 0 0 0 0 0 0 0 0 5994500 0 0 7814000 7838 3184 7163 65749;65750;65751 52181;52182;52183 52181 3 DLDAFENETAKK Unmodified 1379.6569 0.65687437 3184 Q86WJ1 CHD1L Chromodomain-helicase-DNA-binding protein 1-like yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 25.368 25.614 3 0.043495 27484 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 17.666 0.45405 169450000 0 0 0 0 3888300 7258900 7463700 0 10525000 14656000 14901000 22530000 26730000 37879000 23622000 7839 3184 7164 65752;65753;65754;65755;65756;65757;65758;65759;65760;65761 52184 52184 1 DLDARLFLDHDK Unmodified 1456.731 0.73104237 820 P06400 RB1 Retinoblastoma-associated protein yes yes 0 0 1 By MS/MS 2 0 1 1 78.72 70.589 3 0.026117 92782 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.382 21.337 11647000 11647000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7840 820 7165 65762 52185 52185 1 DLDCQQLQSR Unmodified 1261.5721 0.57209888 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 31.342 32.051 2 0.0015513 33968 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.178 67.556 9921800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9921800 7841 2495 7166 65763;65764;65765 52186;52187;52188 52187 3 DLDDALDK Unmodified 903.41854 0.41854158 1113 P20810 CAST Calpastatin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38.805 37.93 2 0.012189 48146 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 105.14 63.833 868820000 88085000 343620000 9991800 25652000 25953000 20011000 31096000 21085000 20303000 21136000 57544000 66328000 26092000 35112000 76805000 7842 1113 7167 65766;65767;65768;65769;65770;65771;65772;65773;65774;65775;65776;65777;65778;65779;65780 52189;52190;52191;52192;52193;52194 52192 4 DLDDISTK Unmodified 905.43419 0.43419164 328 O43427 FIBP Acidic fibroblast growth factor intracellular-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching 10 0 5 1 1 1 1 1 30.571 30.557 2 0.027935 33419 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 57.047 27.737 15353000 0 0 0 2500600 2577400 0 2147200 0 0 0 0 0 5239800 2888000 0 7843 328 7168 65781;65782;65783;65784;65785 52195;52196 52195 2 DLDEDELLGNLSETELK Unmodified 1931.9211 0.92114714 4746 Q9NYL9 TMOD3 Tropomodulin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.79 3.73 3 3 8 2 4 1 1 1 1 1 1 1 1 89.42 87.706 2;3 3.3115E-105 107403 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 263.7 241.23 340430000 30084000 289400000 0 0 1587500 2148600 0 1076000 0 2601400 3053000 3055500 0 1511200 5909100 7844 4746 7169 65786;65787;65788;65789;65790;65791;65792;65793;65794;65795;65796;65797;65798;65799 52197;52198;52199;52200;52201;52202;52203;52204;52205;52206;52207;52208 52198 12 DLDEEGSEK Unmodified 1020.4247 0.42474917 360 O43719 HTATSF1 HIV Tat-specific factor 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 9.7874 9.8998 2 0.021188 8498 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 52.482 37.101 15275000 0 0 0 514140 1229300 1302300 1543900 940360 1275200 701370 0 1827000 1503900 1745400 2691800 7845 360 7170 65800;65801;65802;65803;65804;65805;65806;65807;65808;65809;65810 52209;52210;52211;52212;52213 52212 5 DLDEGPECTPAAQYVR Unmodified 1819.8047 0.8046776 2417 Q14574 DSC3 Desmocollin-3 yes yes 0 0 0 By MS/MS 10 0 1 1 64.228 63.534 2 5.0853E-06 73479 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 87.363 77.93 4712000 0 0 0 4712000 0 0 0 0 0 0 0 0 0 0 0 7846 2417 7171 65811 52214 52214 1 DLDELSR Unmodified 846.40831 0.40831125 1473 P43243 MATR3 Matrin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 33.459 33.595 2 0.023797 36849 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 84.097 30.418 91266000 0 0 0 6881100 6330000 5008900 8596400 7177700 6210400 9981500 10713000 15151000 9138700 6077200 0 7847 1473 7172 65812;65813;65814;65815;65816;65817;65818;65819;65820;65821;65822 52215;52216 52215 2 DLDELSRYPEDK Unmodified 1478.6889 0.68890278 1473 P43243 MATR3 Matrin-3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.44 51.589 2 2.4987E-156 58351 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 230.95 202.25 1042400000 0 0 0 60840000 55149000 85719000 89494000 85831000 67576000 69702000 99550000 124480000 79280000 84201000 140530000 7848 1473 7173 65823;65824;65825;65826;65827;65828;65829;65830;65831;65832;65833;65834 52217;52218;52219;52220;52221;52222;52223;52224;52225;52226;52227;52228;52229 52220 13 DLDESSGVR Unmodified 976.44615 0.44615331 4791 Q9P0J7 KCMF1 E3 ubiquitin-protein ligase KCMF1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 17.994 18.451 2 0.013016 18248 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 60.436 11.078 58733000 0 0 0 0 0 0 0 0 0 12899000 14049000 17431000 0 0 14353000 7849 4791 7174 65835;65836;65837;65838;65839 52230;52231 52230 2 DLDEVLQTHSVFVNVSK Unmodified 1928.9844 0.98435652 5146 Q9Y3A5 SBDS Ribosome maturation protein SBDS yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 2 2 2 2 88.596 83.644 3 3.9687E-05 105770 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.157 69.457 256460000 166700000 89760000 0 0 0 0 0 0 0 0 0 0 0 0 0 7850 5146 7175 65840;65841;65842;65843 52232;52233;52234;52235 52235 3 DLDFAQQK Unmodified 963.46616 0.46616048 3252 Q8IX01 SUGP2 SURP and G-patch domain-containing protein 2 yes yes 0 0 0 By MS/MS 10 0 1 1 39.086 39.827 2 0.042031 43260 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.149 32.197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7851 3252 7176 65844 52236 52236 1 DLDGTCSLHTTASTLDDDGNYTIMAANPQGR Oxidation (M) 3325.4463 0.44631261 3581 Q8WX93 PALLD Palladin yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 74.773 74.993 3 5.553E-40 86421 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 80.359 78.135 24014000 0 0 0 0 0 0 0 0 0 11838000 0 0 0 0 12176000 7852 3581 7177 65845;65846 52237;52238 52237 5078 2 DLDIIDNYDYSHTVK Unmodified 1809.8421 0.84210896 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 6.1 3.91 4 1 5 2 2 1 1 1 1 1 1 77.564 74.957 2;3 6.378E-31 93328 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.22 124.9 291790000 79817000 151180000 7539300 0 0 0 0 0 0 5357600 9114800 14290000 4092400 0 20392000 7853 487 7178 65847;65848;65849;65850;65851;65852;65853;65854;65855;65856 52239;52240;52241;52242;52243;52244;52245;52246 52239 7 DLDISCASLPHMHK Oxidation (M) 1638.7494 0.74941132 2173 Q0D2K0 NIPAL4 Magnesium transporter NIPA4 yes yes 0 1 0 By MS/MS 1 0 1 1 106.68 107.57 2 0.018658 99629 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 46.001 27.256 86069000 0 86069000 0 0 0 0 0 0 0 0 0 0 0 0 0 7854 2173 7179 65857 52247 52247 3546 1 DLDIYYK Unmodified 928.4542 0.45419881 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.34 58.455 2 0.027575 67402 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 77.374 17.765 163850000 0 0 0 8990000 6656800 12621000 12110000 10559000 7873300 14201000 16849000 15573000 16307000 15785000 26327000 7855 3676 7180 65858;65859;65860;65861;65862;65863;65864;65865;65866;65867;65868;65869 52248;52249;52250;52251;52252 52251 5 DLDLDAFAEELERQGYGDK Unmodified 2183.0019 0.0018570786 3038 Q7KZ85 SUPT6H Transcription elongation factor SPT6 yes yes 0 0 1 By MS/MS 2 0 1 1 97.253 89.123 3 4.8103E-06 115127 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.264 56.858 28203000 28203000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7856 3038 7181 65870 52253 52253 0 DLDLLASVPSPSSSGSR Unmodified 1686.8424 0.84244331 3535 Q8WU79 SMAP2 Stromal membrane-associated protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 83.464 83.354 2 0.0043867 96277 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 53.967 8.1376 8572100 0 0 0 1799400 0 0 6772700 0 0 0 0 0 0 0 0 7857 3535 7182 65871;65872;65873;65874;65875;65876 52254;52255;52256;52257;52258;52259 52255 6 DLDLLASVPSPSSSGSRK Unmodified 1814.9374 0.93740633 3535 Q8WU79 SMAP2 Stromal membrane-associated protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 77.946 78.039 3 0.00019981 89815 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 42.633 37.091 105960000 0 0 0 4934700 0 7054600 7804500 8054600 7975600 9379700 10949000 8963600 7287500 10094000 23457000 7858 3535 7183 65877;65878;65879;65880;65881;65882;65883;65884;65885;65886;65887 52260;52261;52262;52263;52264;52265;52266;52267;52268;52269;52270;52271 52265 12 DLDLVQTWNLEK Unmodified 1472.7511 0.75110911 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 92.093 85.58 2 3.1145E-14 106542 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.96 62.274 23845000 3731000 20114000 0 0 0 0 0 0 0 0 0 0 0 0 0 7859 5049 7184 65888;65889 52272;52273 52273 2 DLDNAGELGR Unmodified 1058.4993 0.49925152 671 O95602 POLR1A DNA-directed RNA polymerase I subunit RPA1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.812 35.995 2 0.0029937 39622 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 78.113 47.928 65364000 0 0 0 4831200 3585300 3675000 5984600 4261700 5311400 6576000 7610900 6733300 4644600 4697900 7451900 7860 671 7185 65890;65891;65892;65893;65894;65895;65896;65897;65898;65899;65900;65901 52274;52275;52276;52277;52278;52279;52280;52281 52280 8 DLDPEVFQR Unmodified 1117.5404 0.54038805 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 63.95 64.14 2 0.011037 73337 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 63.419 37.682 30597000 0 0 0 0 0 5144000 0 0 2842800 0 0 9983500 6528100 6098500 0 7861 2775 7186 65902;65903;65904;65905;65906;65907 52282;52283;52284 52283 3 DLDQASLAAVSQQLAPR Unmodified 1781.9272 0.92717599 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 2 2 1 2 2 2 2 2 2 2 84.236 84.359 2;3 4.781E-08 97551 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 97.291 91.396 228610000 0 0 0 0 6506300 12684000 17702000 9207200 13061000 33756000 24659000 27964000 15189000 19304000 48577000 7862 5187 7187 65908;65909;65910;65911;65912;65913;65914;65915;65916;65917;65918;65919;65920;65921;65922;65923;65924;65925;65926;65927 52285;52286;52287;52288;52289;52290;52291;52292;52293;52294;52295;52296;52297;52298;52299;52300;52301;52302 52291 17 DLDQCRDGK Unmodified 1105.4822 0.48222124 1820 P60903 S100A10 Protein S100-A10 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 7.4583 4.1576 2 0.0081288 6275 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.5 96.148 28075000 0 28075000 0 0 0 0 0 0 0 0 0 0 0 0 0 7863 1820 7188 65928;65929 52303;52304 52303 2 DLDRIAGQVAAANK Unmodified 1440.7685 0.76849051 1401 P39019 RPS19 40S ribosomal protein S19 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 4 1 2 1 53.994 54.447 2;3 6.9996E-08 61753 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 92.935 74.522 96223000 0 0 0 0 0 0 0 0 0 0 0 0 36984000 0 59238000 7864 1401 7189 65930;65931;65932;65933 52305;52306;52307;52308 52308 4 DLDRPESQSPK Unmodified 1270.6153 0.61534391 3538 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.07 2.38 2 13 1 1 2 1 1 1 1 1 1 1 1 1 1 1 15.415 14.999 2;3 0.00043602 14847 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 78.342 55.621 394790000 150060 42047000 0 21342000 22634000 27710000 23096000 17774000 14898000 26178000 40507000 34869000 44620000 34735000 44229000 7865 3538 7190 65934;65935;65936;65937;65938;65939;65940;65941;65942;65943;65944;65945;65946;65947;65948 52309;52310;52311;52312;52313;52314;52315;52316;52317;52318 52309 8 DLDSYLK Unmodified 852.4229 0.42289868 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 57.073 57.193 2 0.026085 65097 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 79.454 0 186890000 0 0 0 8962500 13083000 17669000 14136000 14887000 9653800 13628000 16402000 23656000 14159000 19301000 21357000 7866 19 7191 65949;65950;65951;65952;65953;65954;65955;65956;65957;65958;65959;65960 52319;52320 52320 2 DLDTGEEVTR Unmodified 1133.52 0.52004654 2384 Q14166 TTLL12 Tubulin--tyrosine ligase-like protein 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 28.93 29.319 2 0.0013675 31307 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 107.15 59.956 36207000 0 0 0 0 0 7475300 0 0 0 0 6330000 0 0 0 22401000 7867 2384 7192 65961;65962;65963 52321;52322;52323;52324 52324 4 DLDVALPIIENYK Unmodified 1501.8028 0.80281033 2643 Q17R31 TATDN3 Putative deoxyribonuclease TATDN3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 95.591 90.442 2 8.2007E-18 113385 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 157.38 114.07 49258000 7302400 40684000 1272200 0 0 0 0 0 0 0 0 0 0 0 0 7868 2643 7193 65964;65965;65966 52325;52326 52325 2 DLDVITIPSK Unmodified 1099.6125 0.61249036 116 O00139 KIF2A Kinesin-like protein KIF2A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By matching By matching 8 3.33 2 2 11 2 2 1 1 1 1 1 1 1 1 1 1 1 76.381 75.008 2 0.0049526 87264 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 70.908 45.172 259270000 11063000 185080000 0 3702900 0 4407700 0 4577000 4504700 5107500 9162200 8729300 6055500 4902600 11976000 7869 116 7194 65967;65968;65969;65970;65971;65972;65973;65974;65975;65976;65977;65978;65979;65980;65981 52327;52328;52329;52330;52331;52332;52333 52327 7 DLDVSIK Unmodified 788.42798 0.42798405 362 O43747 AP1G1 AP-1 complex subunit gamma-1 yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 51.606 44.726 2 0.030767 58804 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.906 18.867 94768000 30037000 64730000 0 0 0 0 0 0 0 0 0 0 0 0 0 7870 362 7195 65982;65983 52334;52335 52334 2 DLDYYGTLLK Unmodified 1199.6074 0.60740498 2178 Q10567 AP1B1 AP-1 complex subunit beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 80.855 80.204 2 0.0017713 92649 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.502 57.943 477850000 0 365330000 7980700 3062600 2989100 13021000 3734500 5937900 2327900 12554000 7680700 8044700 5935500 12417000 26838000 7871 2178 7196 65984;65985;65986;65987;65988;65989;65990;65991;65992;65993;65994;65995;65996;65997;65998 52336;52337;52338;52339;52340;52341;52342;52343;52344;52345;52346;52347;52348;52349;52350;52351 52340 15 DLEADEEDTR Unmodified 1191.4891 0.48914034 1099 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 22.401 22.69 2 0.011819 23347 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 61.78 27.983 14627000 0 0 0 0 0 1213800 0 1869800 1458400 0 4271600 0 0 0 5813100 7872 1099 7197 65999;66000;66001;66002;66003;66004 52352;52353;52354;52355 52353 4 DLEADEEDTRK Unmodified 1319.5841 0.58410336 1099 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.83 3.5 4 1 13 3 2 1 1 2 2 2 1 1 1 2 17.57 16.848 2;3 0.0019034 19823 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 72.652 48.398 337110000 0 229950000 5835500 0 6344800 4459900 9410000 0 16553000 0 17088000 5791600 5053400 14141000 22480000 7873 1099 7198 66005;66006;66007;66008;66009;66010;66011;66012;66013;66014;66015;66016;66017;66018;66019;66020;66021;66022 52356;52357;52358;52359;52360;52361;52362;52363;52364;52365;52366;52367;52368 52362 11 DLEADEEDTRKK Unmodified 1447.6791 0.67906638 1099 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.65 3.65 5 12 2 1 2 1 1 1 1 1 1 1 1 1 1 1 1 13.766 12.924 2;3 2.3756E-07 12548 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 121.02 100.16 610720000 185970000 29981000 16304000 19629000 22966000 16945000 26377000 22379000 14338000 53371000 46010000 42164000 30249000 27300000 56744000 7874 1099 7199 66023;66024;66025;66026;66027;66028;66029;66030;66031;66032;66033;66034;66035;66036;66037;66038;66039 52369;52370;52371;52372;52373;52374;52375;52376;52377;52378;52379;52380;52381;52382;52383;52384;52385 52370 14 DLEAEHVEVEDTTLNR Unmodified 1868.8752 0.8752 4379 Q9H3K6 BOLA2 BolA-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 1 1 1 1 1 1 2 2 2 2 2 58.886 59.075 2;3 1.6886E-45 66568 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 151.78 128.55 331870000 0 0 0 7559200 8035600 19766000 10619000 7214200 8998300 19982000 47608000 44156000 14398000 31863000 111670000 7875 4379 7200 66040;66041;66042;66043;66044;66045;66046;66047;66048;66049;66050;66051;66052;66053;66054;66055;66056 52386;52387;52388;52389;52390;52391;52392;52393;52394;52395;52396;52397;52398;52399;52400;52401 52395 13 DLEAFNPESK Unmodified 1148.535 0.53496832 2989 Q6W2J9 BCOR BCL-6 corepressor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.91 3.42 2 1 8 1 2 1 1 1 1 1 1 1 1 54.238 53.429 2 0.0038686 60237 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 74.92 40.747 145560000 0 63927000 0 0 0 10124000 0 0 6701500 9714200 11352000 10598000 11915000 7773600 13456000 7876 2989 7201 66057;66058;66059;66060;66061;66062;66063;66064;66065;66066;66067 52402;52403;52404;52405;52406;52407;52408;52409;52410;52411;52412 52410 11 DLEAHIDSANK Unmodified 1211.5782 0.57823012 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.64 3.59 8 2 23 3 5 2 2 2 2 2 1 2 2 2 2 2 2 2 29.845 29.149 2;3 1.4218E-98 37949 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 234.28 157.81 12945000000 66791000 1793500000 11995000 973210000 771670000 692750000 900810000 494480000 655270000 935560000 1167300000 1507200000 1157900000 763070000 1053900000 7877 1356 7202 66068;66069;66070;66071;66072;66073;66074;66075;66076;66077;66078;66079;66080;66081;66082;66083;66084;66085;66086;66087;66088;66089;66090;66091;66092;66093;66094;66095;66096;66097;66098;66099;66100 52413;52414;52415;52416;52417;52418;52419;52420;52421;52422;52423;52424;52425;52426;52427;52428;52429;52430;52431;52432;52433;52434;52435;52436;52437;52438;52439;52440;52441;52442;52443;52444;52445;52446 52422 26 DLEALLNSK Unmodified 1001.5393 0.53932542 757 P02545 LMNA Prelamin-A/C;Lamin-A/C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 76.648 75.511 2 0.0026243 90008 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 134.48 64.211 3157500000 78143000 2182500000 37445000 77399000 30522000 72012000 49793000 62297000 36063000 70772000 93364000 90802000 57537000 71598000 147290000 7878 757 7203 66101;66102;66103;66104;66105;66106;66107;66108;66109;66110;66111;66112;66113;66114;66115;66116 52447;52448;52449;52450;52451;52452;52453;52454;52455;52456;52457;52458;52459;52460;52461;52462 52454 15 DLEALMFDR Unmodified 1108.5223 0.52229515 1380 P36871 PGM1 Phosphoglucomutase-1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 85.561 84.673 2 0.0038222 98205 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.819 51.26 103600000 8367100 0 0 0 0 2284500 1619800 1757700 0 0 8578900 10170000 0 8665900 62157000 7879 1380 7204 66117;66118;66119;66120;66121;66122;66123;66124 52463;52464;52465;52466;52467;52468 52464 6 DLEALMFDR Oxidation (M) 1124.5172 0.51720977 1380 P36871 PGM1 Phosphoglucomutase-1 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 2 2 2 2 72.424 72.604 2 0.0063231 83346 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.27 46.484 82498000 0 0 0 5156500 0 0 0 0 0 0 13017000 17668000 0 14098000 32559000 7880 1380 7204 66125;66126;66127;66128;66129;66130;66131;66132;66133 52469;52470;52471;52472;52473 52470 2139 5 DLEALMFDRSFVGK Oxidation (M) 1642.8025 0.80249275 1380 P36871 PGM1 Phosphoglucomutase-1 yes yes 0 1 1 By MS/MS 2 0 1 1 86.41 78.279 3 0.00035642 102072 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.639 68.377 31076000 31076000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7881 1380 7205 66134 52474;52475 52475 2139 2 DLEALMFDRSFVGK Unmodified 1626.8076 0.80757813 1380 P36871 PGM1 Phosphoglucomutase-1 yes yes 0 0 1 By MS/MS 2 0 2 2 93.894 85.764 2;3 6.8968E-28 111021 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 142.89 122.23 69449000 69449000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7882 1380 7205 66135;66136 52476;52477 52477 1 DLEAPEVQESYR Unmodified 1434.6627 0.66268803 1502 P46379 BAG6 Large proline-rich protein BAG6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 54.703 54.835 2 5.6066E-08 62257 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 120.22 99.937 300980000 0 0 0 17906000 21725000 25402000 20116000 26968000 15856000 22367000 33515000 28274000 27289000 29054000 32510000 7883 1502 7206 66137;66138;66139;66140;66141;66142;66143;66144;66145;66146;66147;66148 52478;52479;52480;52481;52482;52483;52484;52485;52486;52487;52488;52489;52490;52491;52492 52486 15 DLEAPEVQESYRQQLR Unmodified 1959.965 0.96501806 1502 P46379 BAG6 Large proline-rich protein BAG6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 60.164 60.334 3 0.023762 68606 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 29.341 8.1074 31100000 0 0 0 0 0 6440800 8017300 5525600 4780700 0 6336000 0 0 0 0 7884 1502 7207 66149;66150;66151;66152;66153 52493;52494 52493 2 DLEAQIEAANK Unmodified 1200.5986 0.59863121 1357 P35580 MYH10 Myosin-10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 55.664 55.954 2 0.035058 62510 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.557 3.846 229790000 0 0 0 0 0 7378400 0 27483000 7451100 20309000 21782000 97215000 21130000 18216000 8824900 7885 1357 7208 66154;66155;66156;66157;66158;66159;66160;66161;66162 52495 52495 0 DLEASHQHSSPNEQLK Unmodified 1818.8497 0.84965395 4812 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.24 2 1 10 2 1 1 1 1 1 1 1 1 1 1 1 21.935 21.221 3 1.3763E-05 28440 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.993 85.379 98813000 0 20594000 9176200 0 0 6620400 8600600 0 7162400 5870000 6622800 12118000 5505300 10004000 6538300 7886 4812 7209 66163;66164;66165;66166;66167;66168;66169;66170;66171;66172;66173;66174;66175 52496;52497;52498;52499;52500;52501;52502;52503;52504;52505;52506 52499 10 DLEASIAR Unmodified 873.4556 0.45559579 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 40.597 40.69 2 0.011381 45700 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 77.058 24.375 93842000 0 0 0 8545600 6657700 14240000 8091800 3429700 5740400 12353000 0 0 8410600 11058000 15316000 7887 2392 7210 66176;66177;66178;66179;66180;66181;66182;66183;66184;66185 52507;52508;52509 52507 3 DLEASSEPEPTPGAAKPETPQAPPLLPR Unmodified 2894.4662 0.46616706 246 O15056 SYNJ2 Synaptojanin-2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.642 76.7 3 1.5602E-31 88620 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 83.701 76.748 84240000 0 0 0 5309000 5322300 6959000 5873500 5983400 5049700 8527200 8132700 9469500 6323100 8200800 9090100 7888 246 7211 66186;66187;66188;66189;66190;66191;66192;66193;66194;66195;66196;66197 52510;52511;52512;52513;52514;52515;52516;52517;52518;52519;52520;52521 52511 12 DLEDFFSAVGK Unmodified 1226.5819 0.58191851 3139 Q86U06 RBM23 Probable RNA-binding protein 23 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 90.149 90.256 2 0.0032777 104517 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.297 32.363 26468000 0 0 0 0 1134500 1864800 1673900 3702300 2267200 2583800 2112800 2519700 1681600 1843400 5084200 7889 3139 7212 66198;66199;66200;66201;66202;66203;66204;66205;66206;66207;66208 52522;52523;52524;52525;52526;52527;52528;52529 52524 8 DLEDGEVPQHAGK Unmodified 1393.6474 0.64737232 2493 Q15059 BRD3 Bromodomain-containing protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 3.5 2.93 4 1 1 1 4 1 28.993 26.37 2;3 3.9632E-33 34511 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 201.75 173.35 91937000 272110 91665000 0 0 0 0 0 0 0 0 0 0 0 0 0 7890 2493 7213 66209;66210;66211;66212;66213;66214 52530;52531;52532;52533 52531 4 DLEDLFYK Unmodified 1041.5019 0.50187728 2258 Q13242 SRSF9 Serine/arginine-rich splicing factor 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 83.022 81.85 2 0.0068946 94901 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.906 80.185 97047000 14863000 55178000 2815600 0 0 1303900 1111900 1537500 1523000 1837500 2610400 3382300 1739300 0 9145100 7891 2258 7214 66215;66216;66217;66218;66219;66220;66221;66222;66223;66224;66225;66226;66227 52534;52535;52536;52537;52538;52539;52540 52535 7 DLEDLQILIK Unmodified 1198.6809 0.68090428 4061 Q99798 ACO2 Aconitate hydratase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 92.939 87.772 2 0.00033947 110103 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.33 87.261 45838000 10477000 34153000 1207800 0 0 0 0 0 0 0 0 0 0 0 0 7892 4061 7215 66228;66229;66230 52541;52542;52543 52541 3 DLEDQEQLLR Unmodified 1257.6201 0.62009493 1234 P28340 POLD1 DNA polymerase delta catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.29 60.394 2 0.0009375 68165 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 111.74 76.294 113720000 0 0 0 10826000 7317000 13130000 8358900 8350400 6888400 9640500 9007600 10418000 9187900 8820400 11775000 7893 1234 7216 66231;66232;66233;66234;66235;66236;66237;66238;66239;66240;66241;66242 52544;52545;52546;52547;52548;52549;52550;52551;52552;52553;52554;52555 52548 11 DLEDQEQLLRR Unmodified 1413.7212 0.72120596 1234 P28340 POLD1 DNA polymerase delta catalytic subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.807 52.951 3 0.00020557 59741 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 78.655 55.935 386240000 0 0 0 30867000 21640000 34515000 24745000 27238000 22864000 33618000 41039000 29596000 34165000 35832000 50117000 7894 1234 7217 66243;66244;66245;66246;66247;66248;66249;66250;66251;66252;66253;66254 52556;52557;52558;52559;52560;52561;52562;52563;52564;52565;52566 52564 11 DLEDQEQLLRRFGPPGPEAW Unmodified 2352.1499 0.14985872 1234 P28340 POLD1 DNA polymerase delta catalytic subunit yes yes 0 0 2 By MS/MS 2 0 1 1 96.121 87.99 3 0.00013958 113733 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.507 48.742 11072000 11072000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7895 1234 7218 66255 52567 52567 1 DLEDTEANK Unmodified 1033.4564 0.45638365 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 0 0 By MS/MS By MS/MS 1 0 2 1 1 106.59 109.67 2 0.0045479 92358 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 113.91 63.779 92459000 48140000 44319000 0 0 0 0 0 0 0 0 0 0 0 0 0 7896 5071 7219 66256;66257 52568;52569 52568 2 DLEEAEEYK Unmodified 1124.4873 0.48734943 482 O75347 TBCA Tubulin-specific chaperone A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.5 4.07 2 3 1 8 2 3 1 1 1 1 1 1 1 1 1 41.531 40.663 2 0.00317 39003 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 128.69 113.32 1762300000 341870000 931290000 5524000 0 0 0 16648000 0 7805000 14968000 69577000 86993000 19445000 85336000 182830000 7897 482 7220 66258;66259;66260;66261;66262;66263;66264;66265;66266;66267;66268;66269;66270;66271 52570;52571;52572;52573;52574;52575;52576;52577;52578;52579;52580 52580 6 DLEEAEGR Unmodified 917.40904 0.40903953 1749 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 15.705 15.842 2 0.0081134 15511 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 87.323 18.408 33174000 0 0 0 0 1964700 4170400 2466600 3810200 2592200 3902600 6179500 0 3908800 4179200 0 7898 1749 7221 66272;66273;66274;66275;66276;66277;66278;66279;66280 52581;52582;52583;52584;52585;52586;52587;52588 52587 8 DLEEAEGRLAAPLLK Unmodified 1623.8832 0.88318591 1749 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 82.674 79.069 3 0.0013743 98415 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 46.318 22.127 36042000 0 31434000 4607400 0 0 0 0 0 0 0 0 0 0 0 0 7899 1749 7222 66281;66282 52589 52589 1 DLEEAGGLGTEFSELPGK Unmodified 1847.8789 0.8788884 1549 P48681 NES Nestin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 8.25 3.03 1 3 1 1 1 1 82.62 81.808 2 1.0176E-09 95359 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 95.018 70.675 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7900 1549 7223 66283;66284;66285;66286 52590;52591;52592;52593 52592 4 DLEEALEMGVDWSLREGYAWAEDK Unmodified 2811.2698 0.26977544 5168 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog yes yes 0 0 1 By MS/MS 3 0 1 1 101.52 97.945 3 0.00027863 102175 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 51.234 44.359 3228800 3228800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7901 5168 7224 66287 52594;52595 52594 2 DLEEDHACIPIK Unmodified 1438.6762 0.67622961 980 P13639 EEF2 Elongation factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.36 3.91 1 15 5 24 7 10 4 2 2 2 2 2 2 2 2 2 2 2 2 58.365 56.745 2;3 2.5827E-27 70901 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 185.33 170.18 13526000000 1026400000 10963000000 331450000 33568000 27985000 51037000 33550000 38768000 39579000 51732000 158910000 123250000 44461000 157270000 445280000 7902 980 7225 66288;66289;66290;66291;66292;66293;66294;66295;66296;66297;66298;66299;66300;66301;66302;66303;66304;66305;66306;66307;66308;66309;66310;66311;66312;66313;66314;66315;66316;66317;66318;66319;66320;66321;66322;66323;66324;66325;66326;66327;66328;66329;66330;66331;66332 52596;52597;52598;52599;52600;52601;52602;52603;52604;52605;52606;52607;52608;52609;52610;52611;52612;52613;52614;52615;52616;52617;52618;52619;52620;52621;52622;52623;52624;52625;52626;52627;52628;52629;52630;52631;52632;52633;52634;52635;52636;52637;52638;52639;52640 52606 36 DLEEDHACIPIKK Unmodified 1566.7712 0.77119262 980 P13639 EEF2 Elongation factor 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.21 3.79 1 9 2 22 4 5 3 1 2 1 2 2 2 2 2 2 2 2 2 45.82 44.07 2;3;4 8.9937E-09 55951 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 88.021 60.159 3429400000 748680000 1175700000 455300000 19226000 36592000 11997000 64764000 65911000 20814000 49370000 122980000 113570000 56868000 87267000 400370000 7903 980 7226 66333;66334;66335;66336;66337;66338;66339;66340;66341;66342;66343;66344;66345;66346;66347;66348;66349;66350;66351;66352;66353;66354;66355;66356;66357;66358;66359;66360;66361;66362;66363;66364;66365;66366 52641;52642;52643;52644;52645;52646;52647;52648;52649;52650;52651;52652;52653;52654;52655;52656;52657;52658;52659;52660;52661;52662;52663;52664;52665;52666;52667;52668 52659 24 DLEEFFSTVGK Unmodified 1270.6081 0.60813326 2410 Q14498 RBM39 RNA-binding protein 39 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 88.353 88.423 2 0.0001676 102232 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 108.43 56.579 330960000 0 0 0 7170800 13166000 20719000 16818000 23602000 21209000 42831000 28309000 30414000 22602000 28684000 75434000 7904 2410 7227 66367;66368;66369;66370;66371;66372;66373;66374;66375;66376;66377;66378 52669;52670;52671;52672;52673;52674;52675;52676;52677;52678;52679 52672 11 DLEEHIISAGLADMVAAAETITTDSEK Unmodified 2829.359 0.35898438 3704 Q93034 CUL5 Cullin-5 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 104.57 100.38 3 9.2008E-67 124263 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.94 96.618 8271200 0 8271200 0 0 0 0 0 0 0 0 0 0 0 0 0 7905 3704 7228 66379;66380 52680;52681 52680 2 DLEELGANPCLTNSK Unmodified 1659.7774 0.77740021 4584 Q9NR09 BIRC6 Baculoviral IAP repeat-containing protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9 2.65 1 7 1 1 1 1 1 1 1 1 65.436 64.648 2 1.0555E-38 79643 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 170.04 155.07 91525000 0 62276000 0 3175500 0 4471500 0 0 0 5264500 4988800 6188400 0 5160600 0 7906 4584 7229 66381;66382;66383;66384;66385;66386;66387;66388 52682;52683;52684;52685;52686;52687;52688 52685 6 DLEESINK Unmodified 946.46074 0.46074075 3094 Q7Z460 CLASP1 CLIP-associating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.007 30.245 2 0.0075172 32726 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 89.369 32.267 118610000 0 0 0 0 8852100 11512000 10730000 8551700 7260400 11519000 9023600 16657000 12047000 9326600 13135000 7907 3094 7230 66389;66390;66391;66392;66393;66394;66395;66396;66397;66398;66399;66400 52689;52690;52691;52692;52693;52694;52695;52696;52697;52698 52693 10 DLEEVVGLLK Unmodified 1113.6281 0.62814043 4821 Q9P2K8 EIF2AK4 Eukaryotic translation initiation factor 2-alpha kinase 4 yes yes 0 0 0 By MS/MS 2 0 1 1 94.554 89.658 2 0.0036964 111260 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.162 75.254 7878300 0 7878300 0 0 0 0 0 0 0 0 0 0 0 0 0 7908 4821 7231 66401 52699 52699 1 DLEEWNQR Unmodified 1088.4887 0.48868683 886 P09497 CLTB Clathrin light chain B yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 42.711 42.833 2 0.011851 48067 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 117.17 109.23 76534000 0 0 0 11966000 0 9446100 5786000 9252500 0 10501000 13948000 0 8548900 7085600 0 7909 886 7232 66402;66403;66404;66405;66406;66407;66408;66409 52700 52700 0 DLEEWNQRQSEQVEK Unmodified 1916.8864 0.88643339 886 P09497 CLTB Clathrin light chain B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 49.147 43.337 3 0.0087035 56833 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 35.757 26.342 46833000 11160000 30051000 5621100 0 0 0 0 0 0 0 0 0 0 0 0 7910 886 7233 66410;66411;66412 52701;52702;52703;52704 52702 4 DLEFTIYDDDDVSPFLEGLEERPQRK Unmodified 3125.4829 0.48293934 1193 P25786 PSMA1 Proteasome subunit alpha type-1 yes yes 0 0 2 By MS/MS 2.33 0.471 2 1 3 97.007 90.418 3;4 1.9249E-18 115164 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.477 74.331 186820000 186820000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7911 1193 7234 66413;66414;66415 52705;52706;52707;52708 52707 3 DLEGAVSRLGGER Unmodified 1357.695 0.69499121 4376 Q9H307 PNN Pinin yes yes 0 0 1 By MS/MS 10 0 1 1 13.477 13.986 3 0.02259 12999 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 26.541 0 5816400 0 0 0 0 0 0 0 0 0 0 5816400 0 0 0 0 7912 4376 7235 66416 52709 52709 1 DLEGENIEIVFAKPPDQK Unmodified 2041.0368 0.036786022 407 O60506 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.71 3.73 2 2 3 2 1 1 1 1 1 83.743 81.326 3 9.9264E-08 102387 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.545 63.779 170330000 110840000 18606000 3975600 0 0 0 0 0 5850000 0 0 12877000 0 0 18183000 7913 407 7236 66417;66418;66419;66420;66421;66422;66423 52710;52711;52712;52713;52714;52715;52716;52717 52715 8 DLEGLSQR Unmodified 916.46141 0.46140945 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.85 34.033 2 0.0043522 37340 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 111.01 46.231 1260600000 0 0 0 82563000 99920000 116740000 83507000 79079000 50573000 123750000 147760000 179990000 115830000 77462000 103450000 7914 1356 7237 66424;66425;66426;66427;66428;66429;66430;66431;66432;66433;66434;66435 52718;52719;52720;52721;52722;52723;52724;52725;52726 52722 5 DLEGLSQRHEEK Unmodified 1439.7005 0.70047052 1356 P35579 MYH9 Myosin-9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 6 22 2 2 2 1 1 2 2 2 2 2 2 2 2 2 2 23.547 22.824 2;3 1.0755E-22 23961 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 159.94 130.27 6768000000 351220000 153190000 212260000 320050000 273680000 347860000 368460000 299670000 316550000 426110000 653790000 1354200000 484210000 479050000 727670000 7915 1356 7238 66436;66437;66438;66439;66440;66441;66442;66443;66444;66445;66446;66447;66448;66449;66450;66451;66452;66453;66454;66455;66456;66457;66458;66459;66460;66461;66462;66463 52727;52728;52729;52730;52731;52732;52733;52734;52735;52736;52737;52738;52739;52740;52741;52742;52743;52744;52745;52746;52747;52748;52749;52750;52751;52752;52753;52754;52755;52756;52757;52758;52759;52760;52761;52762;52763 52729 36 DLEGQTFEHLSAEELAK Unmodified 1915.9163 0.91633654 2820 Q5VVJ2 MYSM1 Histone H2A deubiquitinase MYSM1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 81.159 77.542 3 0.0015068 96319 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 53.779 38.857 34766000 0 33009000 1757700 0 0 0 0 0 0 0 0 0 0 0 0 7916 2820 7239 66464;66465 52764 52764 1 DLEGSDIDTR Unmodified 1119.5044 0.50439647 1754 P55060 CSE1L Exportin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.355 31.545 2 0.0011859 34739 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 108.98 66.868 672510000 0 0 0 26146000 26042000 98297000 37078000 30879000 20424000 71752000 56901000 81213000 41067000 56170000 126540000 7917 1754 7240 66466;66467;66468;66469;66470;66471;66472;66473;66474;66475;66476;66477 52765;52766;52767;52768;52769;52770;52771;52772;52773;52774;52775;52776;52777;52778;52779;52780;52781;52782;52783;52784;52785;52786;52787 52766 22 DLEGSDIDTRR Unmodified 1275.6055 0.6055075 1754 P55060 CSE1L Exportin-2 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS 10 0 7 2 2 1 2 26.906 26.897 2;3 0.0045049 27665 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 77.677 47.107 64531000 0 0 0 0 8605500 33204000 4362600 0 0 0 0 0 0 18358000 0 7918 1754 7241 66478;66479;66480;66481;66482;66483;66484 52788;52789;52790;52791 52790 3 DLEGYRETR Unmodified 1137.5415 0.54145068 4226;2895 Q6N069;Q9BXJ9 NAA16;NAA15 N-alpha-acetyltransferase 16, NatA auxiliary subunit;N-alpha-acetyltransferase 15, NatA auxiliary subunit no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 19 1 2 2 2 2 2 2 2 2 1 1 22.457 22.636 2;3 9.4372E-05 23555 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 141.48 98.397 8606000000 0 0 0 10873000 33569000 49999000 335270000 371220000 386480000 1181900000 2236600000 3980100000 0 7864900 12108000 7919 2895;4226 7242 66485;66486;66487;66488;66489;66490;66491;66492;66493;66494;66495;66496;66497;66498;66499;66500;66501;66502;66503 52792;52793;52794;52795;52796;52797;52798;52799;52800 52796 2 DLEIDELQK Unmodified 1101.5554 0.55536941 399 O60437 PPL Periplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 62.704 61.596 2 0.0033124 71542 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 93.429 72.128 53705000 0 30520000 0 10687000 2189700 0 2964200 3938300 0 0 0 0 3405700 0 0 7920 399 7243 66504;66505;66506;66507;66508;66509;66510 52801;52802;52803;52804;52805;52806;52807 52806 7 DLEIERPILGQNDNK Unmodified 1752.9006 0.90062689 4889 Q9UGV2 NDRG3 Protein NDRG3 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 67.088 67.151 2 1.3791E-25 76239 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 132.79 107.32 28153000 0 0 0 1778500 0 0 0 0 0 3788400 0 0 3783600 10566000 8236500 7921 4889 7244 66511;66512;66513;66514;66515 52808;52809;52810 52808 3 DLEILHQQNIHQLQNR Unmodified 1998.0395 0.039520409 2977 Q6UVJ0 SASS6 Spindle assembly abnormal protein 6 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 64.977 65.189 4 0.0094412 73913 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 25.866 18.916 20289000 0 0 0 0 0 3201900 0 2748400 2529100 0 0 0 0 2358100 9451900 7922 2977 7245 66516;66517;66518;66519;66520 52811 52811 1 DLEIQALHAR Unmodified 1164.6251 0.62512073 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 2 1 2 2 2 2 2 1 2 2 2 56.728 56.87 2;3 0.00076991 64714 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 122.13 96.241 455520000 0 0 0 15419000 27644000 17165000 39998000 32851000 44384000 35416000 56805000 27805000 44878000 43359000 69797000 7923 2556 7246 66521;66522;66523;66524;66525;66526;66527;66528;66529;66530;66531;66532;66533;66534;66535;66536;66537;66538;66539;66540;66541 52812;52813;52814;52815;52816;52817 52816 5 DLELALSPIHNSSALPTTGR Unmodified 2091.096 0.096032235 3859 Q96GX5 MASTL Serine/threonine-protein kinase greatwall yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 81.942 82.06 3 0.00037812 94882 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 46.027 36.863 15386000 0 0 0 0 0 3824600 0 3956500 3081500 0 0 0 4523700 0 0 7924 3859 7247 66542;66543;66544;66545 52818;52819;52820;52821 52820 4 DLELAVPGTYDPNQPIIR Unmodified 2010.0422 0.042205751 1454 P42345 MTOR Serine/threonine-protein kinase mTOR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 87.557 87.694 2 0.0024957 101921 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 53.528 38.966 10057000 0 0 0 0 0 0 0 1257200 0 3189300 0 2035200 0 1281400 2293700 7925 1454 7248 66546;66547;66548;66549;66550 52822 52822 1 DLELEQYK Unmodified 1036.5077 0.50769094 3493 Q8TCX1 DYNC2LI1 Cytoplasmic dynein 2 light intermediate chain 1 yes yes 0 0 0 By MS/MS 2 0 1 1 56.194 50.379 2 0.01206 65055 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.32 28.702 19889000 0 19889000 0 0 0 0 0 0 0 0 0 0 0 0 0 7926 3493 7249 66551 52823 52823 1 DLELPLSPSLLGGPGPER Unmodified 1845.9836 0.98362824 1088 P19419 ELK1 ETS domain-containing protein Elk-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 94.489 94.642 2 0.0006999 110194 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.55 51.57 9807100 0 0 0 0 0 0 0 756260 0 2010200 1987400 2005800 0 0 3047400 7927 1088 7250 66552;66553;66554;66555;66556 52824;52825;52826;52827;52828;52829 52829 6 DLENGSHIR Unmodified 1039.5047 0.50467125 1183 P25205 MCM3 DNA replication licensing factor MCM3 yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 16.462 16.437 2 0.020387 16535 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 53.166 20.696 10435000 0 0 0 0 2902800 3860400 0 0 0 3671800 0 0 0 0 0 7928 1183 7251 66557;66558;66559 52830 52830 1 DLENLAGPVSLSTPAQLVAPSVVVK Unmodified 2503.3898 0.38975464 1638 P50851 LRBA Lipopolysaccharide-responsive and beige-like anchor protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 5.2 3.92 3 2 2 1 1 1 96.749 94.399 2;3 7.6928E-66 115327 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.27 117.17 154780000 0 145960000 1124300 0 0 0 0 0 0 5451100 0 0 0 0 2247600 7929 1638 7252 66560;66561;66562;66563;66564 52831;52832;52833;52834;52835;52836 52834 6 DLEPESDRSAQPLPLK Unmodified 1793.9159 0.9159426 4976 Q9UKV3 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 59.97 58.795 3 0.00014292 75234 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.91 67.329 238980000 8596600 149680000 0 3552100 3616100 4349200 6209700 4823100 5652800 5846000 8996400 10712000 7361800 7504700 12078000 7930 4976 7253 66565;66566;66567;66568;66569;66570;66571;66572;66573;66574;66575;66576;66577;66578;66579 52837;52838;52839;52840;52841;52842;52843;52844;52845;52846;52847;52848 52840 12 DLEPESDRSAQPLPLKIEELALAK Unmodified 2661.4225 0.42251133 4976 Q9UKV3 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes yes 0 0 2 By MS/MS 2 0 1 1 7.7899 5.5627 6 0.0060476 7878 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 26.754 19.478 10473000 0 0 10473000 0 0 0 0 0 0 0 0 0 0 0 0 7931 4976 7254 66580 52849 52849 0 DLEPGPSGTSK Unmodified 1086.5193 0.51931826 3663 Q92797 SYMPK Symplekin yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 19.822 19.967 2 0.0074255 20337 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 54.066 33.441 76476000 0 0 0 0 6542100 14231000 9692200 0 9791300 0 11084000 0 11027000 14108000 0 7932 3663 7255 66581;66582;66583;66584;66585;66586;66587 52850;52851;52852;52853;52854 52852 5 DLEPVLSVGVFNNK Unmodified 1529.809 0.80895834 201 O14657 TOR1B Torsin-1B yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching 8.12 3.26 1 1 6 2 1 1 1 1 1 1 88.008 87.099 2 0.01069 101481 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 50.284 23.169 32974000 0 24740000 0 0 0 1315900 0 0 1101400 1565100 842180 1991900 0 0 1417000 7933 201 7256 66588;66589;66590;66591;66592;66593;66594;66595 52855;52856;52857 52857 3 DLEQAISQR Unmodified 1058.5356 0.53563702 2099 Q04206 RELA Transcription factor p65 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 46.689 46.973 2 0.0054364 51860 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 77.732 42.437 22110000 0 0 0 0 0 0 0 0 0 7489200 8450200 0 0 6171100 0 7934 2099 7257 66596;66597;66598 52858 52858 1 DLEQMPQR Oxidation (M) 1031.4706 0.47059393 3993 Q96ST2 IWS1 Protein IWS1 homolog yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.82 14.991 2 0.010155 14327 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 68.915 25.107 94633000 0 0 0 6133800 3582000 5605000 5770200 5205700 5147000 7738200 12596000 11414000 12843000 9220700 9377500 7935 3993 7258 66599;66600;66601;66602;66603;66604;66605;66606;66607;66608;66609;66610 52859;52860;52861;52862;52863;52864;52865;52866 52860 5469 8 DLEQMPQR Unmodified 1015.4757 0.4756793 3993 Q96ST2 IWS1 Protein IWS1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 31.807 31.946 2 0.0058895 34355 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 105.12 50.567 178960000 0 0 0 13828000 12228000 14476000 11575000 12417000 8010900 20920000 19159000 28069000 23303000 14976000 0 7936 3993 7258 66611;66612;66613;66614;66615;66616;66617;66618;66619;66620;66621 52867;52868;52869;52870;52871;52872;52873;52874;52875;52876;52877;52878 52876 12 DLERDSLTEK Unmodified 1204.5935 0.59354583 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.19 3.31 5 1 20 2 3 1 2 2 2 2 1 1 1 1 2 2 2 2 27.384 26.465 2;3 0.00017989 32214 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 139.43 72.741 456230000 77446000 146560000 7949900 25922000 15356000 19578000 24452000 5301800 5902100 7296900 8471900 41333000 22036000 17405000 31221000 7937 1201 7259 66622;66623;66624;66625;66626;66627;66628;66629;66630;66631;66632;66633;66634;66635;66636;66637;66638;66639;66640;66641;66642;66643;66644;66645;66646;66647 52879;52880;52881;52882;52883;52884;52885;52886;52887;52888 52882 9 DLESAEER Unmodified 947.4196 0.41960421 308 O43242 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 15.677 15.957 2 0.0059797 15183 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 104.75 64.174 88813000 0 0 0 0 7349500 0 0 0 0 15671000 21495000 30415000 0 5730600 8151900 7938 308 7260 66648;66649;66650;66651;66652;66653;66654;66655;66656 52889;52890;52891;52892;52893;52894;52895;52896;52897;52898;52899 52893 11 DLESAEERR Unmodified 1103.5207 0.52071524 308 O43242 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 0 0 1 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 14.484 14.634 2 0.023299 13979 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 136.39 104.25 75395000 0 0 0 6282100 8144900 9578000 2781900 0 0 0 13515000 22124000 3321700 0 9648400 7939 308 7261 66657;66658;66659;66660;66661;66662;66663;66664 52900;52901 52901 2 DLESAEERRER Unmodified 1388.6644 0.66441937 308 O43242 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.48 13.669 3 0.0023521 12547 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.653 58.226 664110000 0 0 0 46116000 0 58722000 17599000 17569000 17397000 116310000 106580000 154060000 31213000 28579000 69971000 7940 308 7262 66665;66666;66667;66668;66669;66670;66671;66672;66673;66674;66675;66676 52902;52903;52904;52905;52906;52907;52908;52909;52910;52911;52912 52904 11 DLESCSDDDNQGSK Unmodified 1568.5897 0.58965902 2773 Q5T3I0 GPATCH4 G patch domain-containing protein 4 yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 12.616 12.752 2 0.0038052 11991 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 47.261 47.261 6010200 0 0 0 0 573300 0 1189700 739540 541340 1048800 0 0 0 1008900 908600 7941 2773 7263 66677;66678;66679;66680;66681;66682;66683 52913 52913 1 DLESFNEDFLK Unmodified 1355.6245 0.62451161 2895 Q6N069 NAA16 N-alpha-acetyltransferase 16, NatA auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 2 1 83.162 83.204 2 0.00059756 96298 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 97.565 85.61 1072800000 0 0 0 12364000 32284000 50230000 36706000 82377000 61678000 153940000 210880000 432310000 0 0 0 7942 2895 7264 66684;66685;66686;66687;66688;66689;66690;66691;66692;66693 52914;52915;52916;52917;52918;52919;52920;52921;52922;52923 52915 10 DLETQVIQLNEQVHSLK Unmodified 1993.048 0.04801941 2549 Q15555 MAPRE2 Microtubule-associated protein RP/EB family member 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 89.887 86.217 3 2.0981E-46 107195 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.34 111.2 47725000 0 46785000 939950 0 0 0 0 0 0 0 0 0 0 0 0 7943 2549 7265 66694;66695 52924 52924 1 DLEVTCDPDSGGSQGLR Unmodified 1804.7898 0.78975581 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.553 52.696 2 2.2595E-39 59412 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 144.47 140.46 78261000 0 0 0 6285600 3997100 5731600 6142100 6930800 4731600 7152400 7757300 8789400 7355300 7213800 6174100 7944 4285 7266 66696;66697;66698;66699;66700;66701;66702;66703;66704;66705;66706;66707 52925;52926;52927;52928;52929;52930;52931;52932;52933;52934;52935 52930 11 DLEVVEGSAARFDCK Unmodified 1694.7934 0.79338463 2571 Q15746 MYLK Myosin light chain kinase, smooth muscle;Myosin light chain kinase, smooth muscle, deglutamylated form yes yes 0 0 1 By MS/MS 3 0 1 1 98.436 95.085 3 0.039191 114028 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 31.827 7.8933 66671000 0 66671000 0 0 0 0 0 0 0 0 0 0 0 0 0 7945 2571 7267 66708 52936 52936 1 DLFDPIIEDR Unmodified 1231.6085 0.60846762 967 P12277 CKB Creatine kinase B-type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.57 3.85 3 1 3 1 2 1 1 1 1 86.04 83.411 2 0.00055162 97458 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 128.36 101.76 187230000 14829000 23036000 0 0 0 0 0 0 0 0 0 23991000 0 21369000 104000000 7946 967 7268 66709;66710;66711;66712;66713;66714;66715 52937;52938;52939;52940;52941;52942 52938 6 DLFDPIIEDRHGGYKPSDEHK Unmodified 2467.1768 0.17680175 967 P12277 CKB Creatine kinase B-type yes yes 0 0 2 By MS/MS By MS/MS 2.5 0.5 3 3 5 1 74.867 68.692 4;5;6 0.00054081 90619 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.425 42.432 684640000 680980000 3663700 0 0 0 0 0 0 0 0 0 0 0 0 0 7947 967 7269 66716;66717;66718;66719;66720;66721 52943;52944;52945;52946;52947 52947 3 DLFEPQTALLR Unmodified 1301.698 0.69795133 4998 Q9ULK4 MED23 Mediator of RNA polymerase II transcription subunit 23 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 84.461 84.495 2 0.0038839 97467 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.823 46.858 53726000 0 0 0 7093400 5606200 6024400 0 0 4891600 6712400 5931700 5838900 3646100 0 7981800 7948 4998 7270 66722;66723;66724;66725;66726;66727;66728;66729;66730 52948;52949 52948 2 DLFGEVDAALPLDILTYEEK Unmodified 2250.1307 0.13074599 617 O95059 RPP14 Ribonuclease P protein subunit p14 yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 102.25 95.256 2;3 7.036E-112 120755 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 189.09 172.87 57220000 41544000 15676000 0 0 0 0 0 0 0 0 0 0 0 0 0 7949 617 7271 66731;66732;66733 52950;52951;52952 52950 3 DLFHIPPSYK Unmodified 1215.6288 0.62880913 4278 Q9BZZ5 API5 Apoptosis inhibitor 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.68 3.63 9 22 3 4 2 2 2 2 3 1 2 3 2 2 3 77.342 75.985 2;3 0.00086656 96299 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 91.636 91.636 228150000 57503000 41920000 13560000 0 2126500 0 4973100 8197500 16894000 5185700 7111700 14798000 8808500 11815000 35253000 7950 4278 7272 66734;66735;66736;66737;66738;66739;66740;66741;66742;66743;66744;66745;66746;66747;66748;66749;66750;66751;66752;66753;66754;66755;66756;66757;66758;66759;66760;66761;66762;66763;66764 52953;52954;52955;52956;52957;52958;52959;52960;52961;52962;52963;52964;52965;52966;52967;52968;52969;52970;52971;52972 52960 20 DLFINEYR Unmodified 1068.524 0.52400971 4947 Q9UJX6 ANAPC2 Anaphase-promoting complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 70.756 70.803 2 0.012232 80654 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.109 58.554 40597000 0 0 0 3089300 2541600 4225400 2975000 2772000 2278300 3668700 4461000 0 4152600 3908800 6524500 7951 4947 7273 66765;66766;66767;66768;66769;66770;66771;66772;66773;66774;66775 52973;52974;52975;52976;52977;52978;52979 52976 7 DLFNAIATGK Unmodified 1048.5553 0.55530983 768 P04040 CAT Catalase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 76.301 76.317 2 0.0019733 88482 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 97.635 54.766 61276000 0 0 0 10448000 4597500 0 0 16987000 2540900 5918900 4634800 9098400 7050500 0 0 7952 768 7274 66776;66777;66778;66779;66780;66781;66782;66783;66784 52980;52981;52982;52983;52984;52985;52986;52987 52986 8 DLFNVDAFK Unmodified 1067.5288 0.52876073 214 O14777 NDC80 Kinetochore protein NDC80 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 84.214 83.633 2 0.0051115 97190 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 83.265 73.354 93613000 7431000 0 0 0 5055000 11952000 7201800 7226800 6731900 7692000 7460000 8819300 4236800 6108600 13698000 7953 214 7275 66785;66786;66787;66788;66789;66790;66791;66792;66793;66794;66795;66796;66797 52988;52989;52990;52991;52992;52993;52994;52995;52996;52997;52998;52999;53000 52989 13 DLFPDGSISSSTK Unmodified 1352.646 0.64597533 4930 Q9UIV8 SERPINB13 Serpin B13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 67.12 67.191 2 0.0046416 77014 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 50.284 27.544 44324000 0 0 0 11297000 1997600 2564900 2149200 0 3516600 3709200 4252000 5233400 2971500 3200500 3432800 7954 4930 7276 66798;66799;66800;66801;66802;66803;66804;66805;66806;66807;66808 53001;53002;53003;53004 53001 4 DLFPYDK Unmodified 896.42798 0.42798405 3102 Q7Z4V5 HDGFRP2 Hepatoma-derived growth factor-related protein 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 66.636 59.529 2 0.045032 76215 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.616 37.93 188270000 16190000 172080000 0 0 0 0 0 0 0 0 0 0 0 0 0 7955 3102 7277 66809;66810 53005 53005 1 DLFPYEESK Unmodified 1126.5183 0.51825563 1674 P51858 HDGF Hepatoma-derived growth factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.52 4.02 1 8 12 4 3 2 1 1 1 1 1 1 1 1 1 1 1 1 67.331 65.66 2 0.0039848 71992 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 88.294 59.144 6611300000 343710000 5129400000 42789000 54947000 41119000 32449000 38182000 60000000 30622000 54805000 227030000 130690000 47407000 114020000 264220000 7956 1674 7278 66811;66812;66813;66814;66815;66816;66817;66818;66819;66820;66821;66822;66823;66824;66825;66826;66827;66828;66829;66830;66831 53006;53007;53008;53009;53010;53011;53012;53013;53014;53015;53016;53017;53018;53019;53020;53021;53022;53023;53024;53025 53023 17 DLFQVAFNR Unmodified 1108.5665 0.56654322 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 83.516 83.579 2 0.0030241 96732 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 91.626 73.641 99987000 0 0 0 2089600 3121900 8856100 6090000 9661400 7014500 9803200 8217000 12365000 6817300 10268000 15683000 7957 2392 7279 66832;66833;66834;66835;66836;66837;66838;66839;66840;66841;66842;66843 53026;53027;53028;53029;53030;53031;53032;53033;53034;53035;53036;53037;53038;53039;53040 53028 15 DLFQVIYNVK Unmodified 1237.6707 0.67067394 2021 P98082 DAB2 Disabled homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 90.477 90.547 2 2.3458E-06 105112 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 150.4 124.02 107760000 0 0 0 1056200 2813400 5911500 4403600 5352000 7217800 14592000 9885600 6139300 0 10431000 39954000 7958 2021 7280 66844;66845;66846;66847;66848;66849;66850;66851;66852;66853;66854 53041;53042;53043;53044;53045;53046;53047;53048;53049;53050;53051;53052;53053;53054;53055;53056;53057;53058;53059 53045 19 DLFSLDSEDPSPASPPLR Unmodified 1941.932 0.9319866 4147 Q9BTK6 PAGR1 PAXIP1-associated glutamate-rich protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 85.673 85.751 2 7.5979E-11 99712 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 86.814 74.047 26729000 0 0 0 0 2837000 2734400 1648700 3678800 0 0 0 0 5064800 4074600 6690600 7959 4147 7281 66855;66856;66857;66858;66859;66860;66861 53060;53061;53062;53063;53064;53065 53064 6 DLFTCTIK Unmodified 996.49502 0.49501776 3170 Q86VP6 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 2 1 1 1 1 1 1 1 1 1 1 67.503 66.132 2 0.015996 75108 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.981 46.21 908360000 29574000 756670000 23971000 6913700 4680200 0 6214600 4720100 4262100 10452000 8826700 7930500 9752800 12549000 21843000 7960 3170 7282 66862;66863;66864;66865;66866;66867;66868;66869;66870;66871;66872;66873;66874;66875;66876;66877 53066;53067;53068;53069;53070;53071;53072;53073;53074;53075;53076;53077;53078;53079 53069 14 DLGADIILDMATLTGAQGIATGK Unmodified 2244.1671 0.16714827 3417 Q8NDH3 NPEPL1 Probable aminopeptidase NPEPL1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 102.93 97.459 3 9.3002E-11 122029 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.675 56.99 21140000 6442500 14697000 0 0 0 0 0 0 0 0 0 0 0 0 0 7961 3417 7283 66878;66879;66880 53080;53081 53081 2 DLGEEHFK Unmodified 973.45051 0.45051041 65 CON__P02769 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.493 26.692 2 0.0082674 28227 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 86.794 58.687 + 1833300000 0 0 0 213640000 280340000 115410000 172210000 108880000 121690000 212210000 170020000 157730000 107390000 83811000 89960000 7962 65 7284 66881;66882;66883;66884;66885;66886;66887;66888;66889;66890;66891;66892 53082;53083;53084;53085;53086;53087;53088;53089;53090;53091 53087 5 DLGEELEALK Unmodified 1115.571 0.57101948 1356;1366 P35579;P35749 MYH9;MYH11 Myosin-9;Myosin-11 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 2 1 1 79.291 79.352 2 0.011956 91864 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 53.327 27.59 462340000 0 0 0 32363000 29390000 41928000 29469000 22456000 42703000 35982000 38285000 70453000 40070000 29018000 50218000 7963 1356;1366 7285 66893;66894;66895;66896;66897;66898;66899;66900;66901;66902;66903;66904;66905 53092;53093;53094;53095;53096;53097 53095 5 DLGEENFK Unmodified 950.43453 0.434526 64 CON__P02768-1;P02768 ALB Serum albumin yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.743 35.925 2 0.004976 40247 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 130 103.04 + 1313600000 0 0 0 427320000 25730000 25226000 17447000 578680000 18807000 31092000 41937000 42218000 63612000 16604000 24886000 7964 64 7286 66906;66907;66908;66909;66910;66911;66912;66913;66914;66915;66916;66917 53098;53099;53100;53101;53102;53103;53104;53105;53106;53107;53108;53109;53110;53111;53112;53113 53110 12 DLGEIGR Unmodified 758.39227 0.39226725 1491 P45985 MAP2K4 Dual specificity mitogen-activated protein kinase kinase 4 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 31.557 31.841 2 0.045927 33284 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 66.138 66.138 60556000 0 0 0 0 3490500 0 6589600 0 0 8562300 9616600 14077000 0 5964000 12256000 7965 1491 7287 66918;66919;66920;66921;66922;66923;66924 53114 53114 1 DLGEIGRGAYGSVNK Unmodified 1534.774 0.77396981 1491 P45985 MAP2K4 Dual specificity mitogen-activated protein kinase kinase 4 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 57.577 51.526 3 0.017486 64751 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 38.799 11.135 23076000 10817000 0 12259000 0 0 0 0 0 0 0 0 0 0 0 0 7966 1491 7288 66925;66926 53115 53115 1 DLGELSQEAPGLR Unmodified 1383.6994 0.69940789 3499 Q8TD55 PLEKHO2 Pleckstrin homology domain-containing family O member 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 70.886 71.011 2 0.00051428 81501 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 93.058 63.971 41862000 0 0 0 0 2915000 6740900 3420600 0 0 3712400 5449300 4964300 4519500 4094200 6045900 7967 3499 7289 66927;66928;66929;66930;66931;66932;66933;66934;66935;66936 53116;53117;53118;53119;53120;53121;53122;53123 53122 8 DLGGFDEDAEPRR Unmodified 1475.6641 0.66408501 4110 Q9BRK5 SDF4 45 kDa calcium-binding protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 45.631 45.811 3 0.00073102 50396 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.189 40.356 96303000 0 0 0 4542900 5081200 0 5044900 8089100 8895800 7127000 8297900 16514000 8455400 9474700 14781000 7968 4110 7290 66937;66938;66939;66940;66941;66942;66943;66944;66945;66946;66947 53124;53125;53126;53127;53128;53129;53130;53131;53132 53125 9 DLGLAFEIPPHMK Oxidation (M) 1482.7541 0.754086 3608 Q92499 DDX1 ATP-dependent RNA helicase DDX1 yes yes 0 1 0 By MS/MS 2 0 2 2 86.029 77.898 3 0.011306 101916 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 41.242 22.031 6903700 6903700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7969 3608 7291 66948;66949 53133;53134 53133 5099 2 DLGLAQDSATSTK Unmodified 1305.6412 0.64122431 1306 P31937 HIBADH 3-hydroxyisobutyrate dehydrogenase, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 41.27 36.175 2 1.1541E-17 47157 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 137.89 98.59 19598000 0 19598000 0 0 0 0 0 0 0 0 0 0 0 0 0 7970 1306 7292 66950 53135 53135 1 DLGLDPGK Unmodified 813.42323 0.42323303 1474 P43246 MSH2 DNA mismatch repair protein Msh2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 38.726 38.873 2 0.043878 43021 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 49.097 24.098 135680000 0 0 0 9062100 10723000 0 0 0 0 20916000 28235000 0 19187000 18710000 28846000 7971 1474 7293 66951;66952;66953;66954;66955;66956;66957 53136;53137 53136 2 DLGLPTEAYISVEEVHDDGTPTSK Unmodified 2572.2181 0.21805744 1668 P51665 PSMD7 26S proteasome non-ATPase regulatory subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.5 0.5 3 3 2 3 1 87.08 82.842 3 2.5188E-97 103854 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 150.06 142.24 395360000 11494000 364920000 18950000 0 0 0 0 0 0 0 0 0 0 0 0 7972 1668 7294 66958;66959;66960;66961;66962;66963 53138;53139;53140;53141;53142;53143 53138 6 DLGLSESGEDVNAAILDESGK Unmodified 2117.9964 0.99643735 982 P13667 PDIA4 Protein disulfide-isomerase A4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.04 3.41 1 3 2 18 2 3 1 1 2 2 1 1 1 2 2 1 1 2 2 82.563 81.716 2;3 6.5308E-156 93455 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 199.58 188.2 984910000 24662000 737190000 2814700 2382600 11447000 15884000 5366200 12053000 10751000 19674000 40064000 14628000 10049000 17380000 60569000 7973 982 7295 66964;66965;66966;66967;66968;66969;66970;66971;66972;66973;66974;66975;66976;66977;66978;66979;66980;66981;66982;66983;66984;66985;66986;66987 53144;53145;53146;53147;53148;53149;53150;53151;53152;53153;53154;53155;53156;53157;53158;53159;53160;53161;53162;53163;53164;53165 53151 22 DLGLSESGEDVNAAILDESGKK Unmodified 2246.0914 0.091400367 982 P13667 PDIA4 Protein disulfide-isomerase A4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.21 3.66 4 3 12 2 4 1 1 1 1 1 1 1 1 1 1 1 1 1 77.874 76.295 2;3 0 93879 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 363.82 349.79 1034000000 131860000 686530000 19562000 3465900 9385800 4835400 8663300 16286000 6581500 16947000 25337000 19773000 9053100 14853000 60917000 7974 982 7296 66988;66989;66990;66991;66992;66993;66994;66995;66996;66997;66998;66999;67000;67001;67002;67003;67004;67005;67006 53166;53167;53168;53169;53170;53171;53172;53173;53174;53175;53176;53177;53178;53179;53180;53181;53182;53183;53184 53170 19 DLGLVLR Unmodified 784.48069 0.48068833 2792 Q5TAX3 ZCCHC11 Terminal uridylyltransferase 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 71.379 71.384 2 0.027168 81153 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.748 23.223 16978000 0 0 0 1870800 2111200 0 0 2239200 0 0 3267700 0 0 3377000 4111800 7975 2792 7297 67007;67008;67009;67010;67011;67012 53185;53186 53185 2 DLGQSNSDLDMPFAK Oxidation (M) 1652.7352 0.73520105 3180 Q86W92 PPFIBP1 Liprin-beta-1 yes yes 0 1 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.711 61.811 2 4.8041E-20 70378 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 111.63 102.63 317750000 0 0 0 14561000 16341000 26656000 26278000 19400000 16261000 28140000 35738000 42503000 34587000 27570000 29720000 7976 3180 7298 67013;67014;67015;67016;67017;67018;67019;67020;67021;67022;67023;67024 53187;53188;53189;53190;53191;53192;53193;53194;53195 53191 4797 9 DLGQSNSDLDMPFAK Unmodified 1636.7403 0.74028642 3180 Q86W92 PPFIBP1 Liprin-beta-1 yes yes 0 0 0 By MS/MS 10 0 1 1 76.892 77.179 2 0.00027952 88536 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.431 70.112 102110000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 102110000 7977 3180 7298 67025 53196 53196 1 DLGSLNGTFVNDVR Unmodified 1505.7474 0.74742071 2759 Q5SW79 CEP170 Centrosomal protein of 170 kDa yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 78.433 78.421 2 0.020245 90829 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 49.081 37.445 84062000 0 0 0 10899000 16954000 10081000 0 6274900 0 10811000 10610000 18432000 0 0 0 7978 2759 7299 67026;67027;67028;67029;67030;67031;67032 53197 53197 0 DLGSTEDGDGTDDFLTDKEDEK Unmodified 2400.9929 0.99286811 2542 Q15527 SURF2 Surfeit locus protein 2 yes yes 0 0 1 By MS/MS 2 0 1 1 65.478 57.189 3 4.9402E-11 76966 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.395 80.672 6537300 6537300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7979 2542 7300 67033 53198 53198 1 DLGTESQIFISR Unmodified 1364.6936 0.69359423 1620 P50395 GDI2 Rab GDP dissociation inhibitor beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75.81 74.716 2 1.7586E-27 86286 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 170.99 144.61 429440000 37943000 23961000 11149000 14730000 8657800 12284000 11429000 11569000 8994800 17388000 53874000 40478000 9117000 33689000 134180000 7980 1620 7301 67034;67035;67036;67037;67038;67039;67040;67041;67042;67043;67044;67045;67046;67047;67048;67049 53199;53200;53201;53202;53203;53204;53205;53206;53207;53208;53209;53210;53211;53212;53213;53214;53215;53216 53202 17 DLGTESQIFISRTYDATTHFETTCDDIK Unmodified 3263.4929 0.4928521 1620 P50395 GDI2 Rab GDP dissociation inhibitor beta yes yes 0 0 1 By MS/MS 2 0 2 2 94.093 85.962 3;4 0 111291 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 316.38 295.12 236990000 236990000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7981 1620 7302 67050;67051 53217;53218 53218 2 DLGTQNHTSELILSSPPGQK Unmodified 2121.0702 0.070211415 4992 Q9ULD2 MTUS1 Microtubule-associated tumor suppressor 1 yes yes 0 0 0 By MS/MS 3 0 1 1 69.341 64.709 3 0.0045658 79074 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 23.726 9.4722 1967400 0 1967400 0 0 0 0 0 0 0 0 0 0 0 0 0 7982 4992 7303 67052 53219 53219 1 DLGVFIPAPMAQGMR 2 Oxidation (M) 1633.7956 0.79563323 1974 P78344 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 81.779 81.885 2 2.6699E-10 94639 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 94.309 76.942 1283000000 0 0 0 0 95441000 111490000 116660000 114950000 107170000 138700000 144860000 190400000 0 120780000 142510000 7983 1974 7304 67053;67054;67055;67056;67057;67058;67059;67060;67061;67062 53220;53221;53222;53223;53224;53225;53226;53227;53228;53229;53230;53231 53220 3165;3166 12 DLGVFIPAPMAQGMR Oxidation (M) 1617.8007 0.80071861 1974 P78344 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 1 2 2 1 2 2 2 1 2 2 2 86.502 86.598 2 8.3783E-19 101470 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 105.2 99.472 350610000 0 0 0 4857400 9910700 30885000 17789000 19756000 18467000 38775000 37042000 20568000 24643000 39606000 88307000 7984 1974 7304 67063;67064;67065;67066;67067;67068;67069;67070;67071;67072;67073;67074;67075;67076;67077;67078;67079;67080;67081;67082 53232;53233;53234;53235;53236;53237;53238;53239;53240;53241;53242;53243;53244;53245;53246;53247;53248;53249;53250;53251;53252;53253;53254;53255 53242 3165;3166 24 DLGVFIPAPMAQGMR Unmodified 1601.8058 0.80580399 1974 P78344 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 91.755 91.891 2 1.3585E-05 106623 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 79.148 64.458 63202000 0 0 0 0 0 4172200 1964500 6860500 3058300 5346100 6629600 4798300 1593900 5784100 22994000 7985 1974 7304 67083;67084;67085;67086;67087;67088;67089;67090;67091;67092 53256;53257;53258;53259;53260;53261;53262;53263;53264;53265;53266;53267;53268;53269;53270 53257 15 DLGVPDTK Unmodified 843.4338 0.43379771 285 O15427 SLC16A3 Monocarboxylate transporter 4 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 33.423 33.812 2 0.040979 36411 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 50.127 24.3 6441200 0 0 0 0 0 0 0 0 0 0 2485400 0 0 3955800 0 7986 285 7305 67093;67094 53271 53271 1 DLGYIYFYQR Unmodified 1336.6452 0.64518747 1488 P45974 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 83.173 83.308 2 0.0013167 96425 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 107.66 81.726 19268000 0 0 0 0 0 4823100 0 0 2210600 0 0 0 0 0 12234000 7987 1488 7306 67095;67096;67097 53272;53273 53272 2 DLGYPFALSK Unmodified 1109.5757 0.57571092 214 O14777 NDC80 Kinetochore protein NDC80 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 80.44 79.919 2 0.0065063 98079 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.749 57.013 164150000 0 92934000 0 2353600 3326800 6500200 4450700 4905200 4542200 7602100 6911100 8608200 5898000 5490200 10628000 7988 214 7307 67098;67099;67100;67101;67102;67103;67104;67105;67106;67107;67108;67109;67110;67111 53274;53275;53276;53277;53278;53279;53280;53281;53282;53283;53284;53285;53286;53287 53277 14 DLHECLEAAMIEGEIESLHSENSGK Unmodified 2797.2535 0.25347345 4905 Q9UHP3 USP25 Ubiquitin carboxyl-terminal hydrolase 25 yes yes 0 0 0 By MS/MS 2 0 1 1 95.369 87.238 4 7.6999E-05 112856 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.881 53.249 5354100 5354100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7989 4905 7308 67112 53288;53289 53289 2 DLHEEMNYITAIIEEQPK Unmodified 2172.0409 0.040885122 1567 P49354 FNTA Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 99.25 95.218 3 2.0155E-05 117804 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.548 70.157 17433000 0 17433000 0 0 0 0 0 0 0 0 0 0 0 0 0 7990 1567 7309 67113;67114 53290;53291 53290 2 DLHMERVISYEEGK Oxidation (M) 1720.809 0.80903469 2524 Q15382 RHEB GTP-binding protein Rheb yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 45.436 39.836 3 0.0068146 50147 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 50.222 43.815 26258000 16766000 0 9492300 0 0 0 0 0 0 0 0 0 0 0 0 7991 2524 7310 67115;67116 53292;53293 53293 4159 2 DLHMERVISYEEGK Unmodified 1704.8141 0.81412007 2524 Q15382 RHEB GTP-binding protein Rheb yes yes 0 0 1 By MS/MS 2 0 1 1 68.143 59.848 3 2.5786E-05 80002 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 105.19 99.476 29450000 29450000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7992 2524 7310 67117 53294 53294 1 DLHTLDSHVR Unmodified 1191.5996 0.59963426 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 29.474 29.639 3 0.044454 31983 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 38.783 27.618 250760000 0 0 0 18151000 14414000 21449000 28734000 21893000 22792000 26836000 29165000 33230000 0 0 34099000 7993 2775 7311 67118;67119;67120;67121;67122;67123;67124;67125;67126;67127 53295 53295 0 DLHTTAFK Unmodified 931.47633 0.47633123 2189 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.483 26.683 2 0.022985 27314 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 60.709 36.736 98639000 0 0 0 5972500 6289600 9257600 9394100 8103700 5427900 10463000 8171600 10861000 7453800 6060800 11184000 7994 2189 7312 67128;67129;67130;67131;67132;67133;67134;67135;67136;67137;67138;67139 53296;53297;53298 53296 3 DLHVSTGEFTDLK Unmodified 1460.7147 0.7147236 311 O43264 ZW10 Centromere/kinetochore protein zw10 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 69.537 69.74 3 0.026258 79385 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 18.689 5.5703 44910000 0 0 0 0 0 5433400 3056900 0 2673200 4232800 5508500 4966300 4021800 4118100 10899000 7995 311 7313 67140;67141;67142;67143;67144;67145;67146;67147;67148 53299;53300 53299 2 DLIDEGHAATQLVNQLHDVVVENNLSDK Unmodified 3085.5316 0.53162086 1347 P35249 RFC4 Replication factor C subunit 4 yes yes 0 0 0 By MS/MS By MS/MS 2.6 0.49 2 3 3 2 96.914 91.65 3;4 1.4851E-145 115325 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 160.26 131.33 174810000 152150000 22660000 0 0 0 0 0 0 0 0 0 0 0 0 0 7996 1347 7314 67149;67150;67151;67152;67153 53301;53302;53303;53304 53303 3 DLIEAIR Unmodified 828.47052 0.47051757 4117 Q9BRT3 MIEN1 Migration and invasion enhancer 1 yes yes 0 0 0 By MS/MS 10 0 1 1 62.28 62.853 2 0.038679 71074 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.383 17.811 7169400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7169400 7997 4117 7315 67154 53305 53305 1 DLIEDSSVQK Unmodified 1132.5612 0.56118307 3029 Q71RC2 LARP4 La-related protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.988 39.168 2 0.0019383 43344 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 99.442 63.562 117460000 0 0 0 8209100 6232600 11022000 5994600 7080300 8494500 13030000 11306000 15848000 9731100 5604300 14906000 7998 3029 7316 67155;67156;67157;67158;67159;67160;67161;67162;67163;67164;67165;67166 53306;53307;53308;53309;53310;53311;53312;53313;53314 53311 9 DLIESLSEDRARLLEEK Unmodified 2015.0535 0.053498719 3509 Q8TDY2 RB1CC1 RB1-inducible coiled-coil protein 1 yes yes 0 0 2 By MS/MS 2 0 1 1 91.175 83.045 3 0.020033 107811 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.827 35.405 11820000 11820000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7999 3509 7317 67167 53315 53315 1 DLIGVQNLLK Unmodified 1111.6601 0.66010926 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 86.935 85.817 2 0.001865 99722 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 96.492 55.463 684340000 24416000 481410000 8860700 3492400 4858900 14348000 7693800 9321300 8340400 16402000 22245000 20593000 8477700 13398000 40483000 8000 2344 7318 67168;67169;67170;67171;67172;67173;67174;67175;67176;67177;67178;67179;67180;67181;67182;67183 53316;53317;53318;53319;53320;53321;53322;53323;53324;53325;53326;53327;53328;53329;53330;53331;53332 53317 17 DLIHDQDEDEEEEEGQR Unmodified 2084.8407 0.84066499 5046 Q9UNZ2 NSFL1C NSFL1 cofactor p47 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 36.332 36.834 3 2.4867E-25 39696 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 108.96 104.72 16479000 0 0 0 0 0 0 0 0 0 0 4075600 0 0 2294800 10109000 8001 5046 7319 67184;67185;67186 53333;53334 53333 2 DLIHGAPVGK Unmodified 1005.5607 0.56072956 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 0 By MS/MS 10 0 1 1 39.408 40.149 2 0.02237 43593 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.129 23.057 6919800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6919800 8002 2431 7320 67187 53335 53335 1 DLILADYGK Unmodified 1006.5335 0.53351176 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.071 68.152 2 0.0083679 78298 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 69.825 31.033 306310000 0 0 0 14533000 14744000 20966000 19698000 18056000 21429000 24098000 30836000 39208000 26082000 34281000 42380000 8003 2930 7321 67188;67189;67190;67191;67192;67193;67194;67195;67196;67197;67198;67199 53336;53337;53338;53339;53340;53341;53342;53343;53344;53345;53346;53347;53348;53349 53339 14 DLILNPR Unmodified 839.4865 0.48650199 2528 Q15393 SF3B3 Splicing factor 3B subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 52.526 52.667 2 0.015385 59498 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 118.06 75.056 737450000 0 0 0 34274000 41882000 43961000 45418000 0 35486000 70631000 82974000 90495000 74995000 88440000 128890000 8004 2528 7322 67200;67201;67202;67203;67204;67205;67206;67207;67208;67209;67210 53350;53351;53352;53353;53354;53355;53356;53357;53358;53359 53353 9 DLILPTIQK Unmodified 1039.6277 0.6277465 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 78.592 77.253 1;2 0.0025372 95433 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 148.52 77.227 1085200000 10563000 409390000 6531500 35030000 42745000 69441000 44619000 45050000 36294000 64919000 58454000 71625000 51251000 64197000 75120000 8005 3641 7323 67211;67212;67213;67214;67215;67216;67217;67218;67219;67220;67221;67222;67223;67224;67225;67226;67227 53360;53361;53362;53363;53364;53365;53366;53367;53368;53369;53370;53371;53372;53373;53374 53364 15 DLILQCLDDK Unmodified 1231.6118 0.61183843 193 O14617 AP3D1 AP-3 complex subunit delta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 77.852 77.183 2 0.0023779 89417 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 84.213 62.065 107810000 0 66671000 0 2726100 0 7295200 2213600 3381500 4585000 4281300 0 5744300 3561100 0 7351700 8006 193 7324 67228;67229;67230;67231;67232;67233;67234;67235;67236;67237;67238;67239 53375;53376;53377;53378;53379;53380;53381;53382;53383;53384;53385 53375 11 DLIMTNDDILQK Oxidation (M) 1433.7072 0.70719538 3220 Q8IUR7 ARMC8 Armadillo repeat-containing protein 8 yes yes 0 1 0 By MS/MS 2 0 1 1 74.392 69.237 2 1.3905E-05 86996 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.66 85.442 16420000 0 16420000 0 0 0 0 0 0 0 0 0 0 0 0 0 8007 3220 7325 67240 53386 53386 4838 1 DLINRMDYVEINIDHK Oxidation (M) 2002.9782 0.97822529 2033 Q00341 HDLBP Vigilin yes yes 0 1 1 By MS/MS 2 0 1 1 77.758 69.628 4 0.0036387 91561 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.265 43.209 21688000 21688000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8008 2033 7326 67241 53387 53387 3284 1 DLINRMDYVEINIDHK Unmodified 1986.9833 0.98331066 2033 Q00341 HDLBP Vigilin yes yes 0 0 1 By MS/MS 2 0 1 1 84.496 76.365 4 0.015692 99655 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 39.517 35.737 44958000 44958000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8009 2033 7326 67242 53388 53388 1 DLINTANWR Unmodified 1101.5567 0.55670682 2417 Q14574 DSC3 Desmocollin-3 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 68.63 68.392 2 0.021727 79326 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 92.47 57.663 24165000 0 0 0 8063700 0 0 0 16101000 0 0 0 0 0 0 0 8010 2417 7327 67243;67244 53389;53390 53390 1 DLIPYLEK Unmodified 989.54335 0.54334816 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 78.926 78.618 2 0.0068825 90351 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 92.47 61.167 806120000 0 402300000 0 17044000 21396000 36983000 23725000 30134000 27137000 38293000 38944000 43382000 38282000 35493000 53015000 8011 528 7328 67245;67246;67247;67248;67249;67250;67251;67252;67253;67254;67255;67256;67257 53391;53392;53393;53394;53395;53396;53397;53398;53399;53400;53401;53402;53403 53396 13 DLIQAAQK Unmodified 885.49198 0.4919813 3037 Q76L83 ASXL2 Putative Polycomb group protein ASXL2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 31.974 32.189 2 0.026089 35079 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 58.167 8.5774 39785000 0 0 0 0 5213500 2824400 3726300 2840800 3737700 3668200 0 5534300 4897100 3977800 3365000 8012 3037 7329 67258;67259;67260;67261;67262;67263;67264;67265;67266;67267 53404 53404 1 DLIQDQNMDEK Oxidation (M) 1363.5926 0.59255956 4376 Q9H307 PNN Pinin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 27.928 28.188 2 0.00022318 29123 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 96.665 79.639 73251000 0 0 0 0 5386700 4096000 0 7146600 4968500 7619800 8251700 8464100 10152000 9914400 7250900 8013 4376 7330 67268;67269;67270;67271;67272;67273;67274;67275;67276;67277;67278 53405;53406;53407;53408;53409;53410;53411;53412;53413;53414 53410 5830 9 DLIQDQNMDEK Unmodified 1347.5976 0.59764493 4376 Q9H307 PNN Pinin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 41.302 41.492 2 0.00027402 45157 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 105.4 87.532 82920000 0 0 0 3908000 7266100 0 5816500 3956900 5179300 7387900 7979500 10333000 8496200 9424500 13171000 8014 4376 7330 67279;67280;67281;67282;67283;67284;67285;67286;67287;67288;67289 53415;53416;53417;53418;53419;53420;53421;53422;53423;53424 53417 10 DLIQGLLTVDPNK Unmodified 1424.7875 0.78749461 520 O75582 RPS6KA5 Ribosomal protein S6 kinase alpha-5 yes yes 0 0 0 By MS/MS 2 0 1 1 93.973 89.076 2 0.011052 110519 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.511 47.292 20830000 0 20830000 0 0 0 0 0 0 0 0 0 0 0 0 0 8015 520 7331 67290 53425 53425 1 DLISHDEMFSDIYK Oxidation (M) 1727.7713 0.7712522 984 P13693 TPT1 Translationally-controlled tumor protein yes yes 0 1 0 By matching By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 73.728 73.948 3 7.0904E-14 84795 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.98 92.156 70559000 0 0 0 0 0 0 0 0 3214100 0 11164000 0 0 8925800 47255000 8016 984 7332 67291;67292;67293;67294 53426 53426 1328 1 DLISHDEMFSDIYK Unmodified 1711.7763 0.77633758 984 P13693 TPT1 Translationally-controlled tumor protein yes yes 0 0 0 By MS/MS 10 0 1 1 80.53 80.746 3 5.1371E-13 92934 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 108.58 102.28 19730000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19730000 8017 984 7332 67295 53427 53427 1 DLISNSPR Unmodified 900.46649 0.46649483 1086 P19387 POLR2C DNA-directed RNA polymerase II subunit RPB3 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 31.058 31.773 2 0.01982 34114 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 63.306 18.775 32808000 0 0 0 0 0 0 0 0 0 0 0 15107000 0 0 17702000 8018 1086 7333 67296;67297 53428 53428 1 DLITEAMEIK Unmodified 1161.5951 0.59512574 2250 Q13188 STK3 Serine/threonine-protein kinase 3;Serine/threonine-protein kinase 3 36kDa subunit;Serine/threonine-protein kinase 3 20kDa subunit yes yes 0 0 0 By MS/MS 10 0 1 1 85.583 85.688 2 0.042113 99315 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 54.416 21.576 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8019 2250 7334 67298 53429 53429 1 DLITQATLLYTMADK Oxidation (M) 1711.8702 0.87023797 2945 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 92.26 91.953 2 2.8464E-14 106678 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.353 74.503 37637000 0 12328000 0 0 1062200 1053500 1179000 846530 879390 5155400 2969100 2704000 1192100 2740100 5527900 8020 2945 7335 67299;67300;67301;67302;67303;67304;67305;67306;67307;67308;67309;67310 53430;53431;53432;53433;53434 53432 4579 5 DLITQATLLYTMADK Unmodified 1695.8753 0.87532334 2945 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 98.564 94.543 3 0.0039878 116687 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 48.423 40.642 14819000 0 14819000 0 0 0 0 0 0 0 0 0 0 0 0 0 8021 2945 7335 67311;67312 53435 53435 1 DLIVSGDEK Unmodified 974.49204 0.49204087 3518 Q8TEQ6 GEMIN5 Gem-associated protein 5 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 34.455 34.841 2 0.0054364 37175 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.732 34.514 19660000 0 0 0 0 0 0 0 0 1914000 0 0 0 0 6513700 11233000 8022 3518 7336 67313;67314;67315 53436 53436 1 DLKPDNMLISNEGHIK Unmodified 1822.9247 0.92473315 3859 Q96GX5 MASTL Serine/threonine-protein kinase greatwall yes yes 0 0 1 By MS/MS 10 0 1 1 62.034 62.177 3 0.03184 70916 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 27.652 11.931 10107000 0 0 0 0 0 0 0 0 0 10107000 0 0 0 0 0 8023 3859 7337 67316 53437 53437 1 DLKPENILLDEEGHIK Unmodified 1861.9785 0.97854286 2531;1672 Q15418;P51812;Q15349 RPS6KA1;RPS6KA3;RPS6KA2 Ribosomal protein S6 kinase alpha-1;Ribosomal protein S6 kinase alpha-3;Ribosomal protein S6 kinase alpha-2 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 77.153 77.297 3 0.00043786 89302 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 53.008 46.572 56741000 0 0 0 0 0 7939900 0 5772300 3963900 5166500 0 0 0 0 33898000 8024 2531;1672 7338 67317;67318;67319;67320;67321 53438;53439;53440;53441;53442 53439 5 DLKPENILVDNDFHIK Unmodified 1908.9945 0.99452728 2313 Q13546 RIPK1 Receptor-interacting serine/threonine-protein kinase 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 1 2 87.343 81.427 3;4 0.00020201 103139 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.315 67.26 79195000 34125000 45070000 0 0 0 0 0 0 0 0 0 0 0 0 0 8025 2313 7339 67322;67323;67324 53443;53444;53445 53445 3 DLKPENILVTSGGTVK Unmodified 1669.9251 0.92505073 956 P11802 CDK4 Cyclin-dependent kinase 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 71.093 71.086 3 0.014635 81769 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 41.871 35.708 103460000 0 0 0 6870900 9180700 11105000 8995100 6701100 0 16222000 18441000 0 10803000 15142000 0 8026 956 7340 67325;67326;67327;67328;67329;67330;67331;67332;67333 53446;53447 53446 1 DLKPENIMLNHQGHVK Unmodified 1871.9676 0.96760102 1158 P23443 RPS6KB1 Ribosomal protein S6 kinase beta-1 yes yes 0 0 1 By matching By matching By MS/MS 10 0 3 1 1 1 48.04 48.411 4 0.037326 53509 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 31.58 25.549 25856000 0 0 0 0 0 6858100 0 0 0 0 0 0 7030200 0 11968000 8027 1158 7341 67334;67335;67336 53448 53448 0 DLKPENLLLASK Unmodified 1339.7711 0.77111627 2315;2316 Q13555;Q13554;Q9UQM7;Q13557 CAMK2G;CAMK2B;CAMK2A;CAMK2D Calcium/calmodulin-dependent protein kinase type II subunit gamma;Calcium/calmodulin-dependent protein kinase type II subunit beta;Calcium/calmodulin-dependent protein kinase type II subunit alpha;Calcium/calmodulin-dependent protein kinase type II subunit delta no no 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.351 74.414 3 0.0031103 84787 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 56.951 52.608 225870000 0 0 0 13404000 14355000 14973000 12962000 17077000 13261000 22076000 21498000 24005000 21052000 15817000 35392000 8028 2315;2316 7342 67337;67338;67339;67340;67341;67342;67343;67344;67345;67346;67347;67348 53449;53450;53451;53452;53453;53454;53455;53456 53454 6 DLKPENLLYYSQDEESK Unmodified 2069.9793 0.97933072 3214 Q8IU85 CAMK1D Calcium/calmodulin-dependent protein kinase type 1D yes yes 0 0 1 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 76.757 76.884 3 0.00026379 88310 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.542 56.574 16216000 0 0 0 0 0 3218400 0 0 0 2961900 0 0 0 3110700 6925500 8029 3214 7343 67349;67350;67351;67352 53457 53457 1 DLKPENVLLDAHMNAK Unmodified 1806.9298 0.92981853 2238 Q13131;P54646 PRKAA1;PRKAA2 5'-AMP-activated protein kinase catalytic subunit alpha-1;5'-AMP-activated protein kinase catalytic subunit alpha-2 yes no 0 0 1 By MS/MS 10 0 1 1 71.789 72.192 3 0.00018928 82475 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.413 62.753 6302600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6302600 8030 2238 7344 67353 53458 53458 1 DLKPENVLLDAHMNAK Oxidation (M) 1822.9247 0.92473315 2238 Q13131;P54646 PRKAA1;PRKAA2 5'-AMP-activated protein kinase catalytic subunit alpha-1;5'-AMP-activated protein kinase catalytic subunit alpha-2 yes no 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 61.923 62.243 3 0.0097075 70936 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 40.693 19.46 59319000 0 0 0 0 0 0 0 7642100 4802600 0 0 20534000 0 6544200 19796000 8031 2238 7344 67354;67355;67356;67357;67358 53459 53459 3637 0 DLKPNGANILVTEENK Unmodified 1753.921 0.92102798 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 60.367 60.602 3 0.02719 69277 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 18.58 13.116 29970000 0 0 0 0 0 4278300 2243600 0 2692300 0 3062000 0 4659500 2949100 10085000 8032 3119 7345 67359;67360;67361;67362;67363;67364;67365 53460 53460 1 DLKPNGANILVTEENKK Unmodified 1882.016 0.015991 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 52.376 52.522 3;4 0.035099 57907 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.938 35.21 234910000 0 0 0 12260000 11154000 18559000 16941000 18086000 8062900 25320000 26043000 29904000 19387000 18336000 30858000 8033 3119 7346 67366;67367;67368;67369;67370;67371;67372;67373;67374;67375;67376;67377;67378;67379;67380;67381;67382;67383;67384;67385;67386;67387;67388;67389 53461;53462;53463;53464 53461 4 DLKPQNLLIDDK Unmodified 1410.7718 0.77184455 822 P06493 CDK1 Cyclin-dependent kinase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.9 68.98 3 2.0921E-08 78286 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 129.71 119.52 765720000 0 0 0 42825000 31912000 67936000 58065000 49446000 37048000 65718000 71024000 79658000 55646000 65638000 140810000 8034 822 7347 67390;67391;67392;67393;67394;67395;67396;67397;67398;67399;67400;67401 53465;53466;53467;53468;53469;53470;53471;53472;53473;53474;53475;53476;53477 53469 9 DLKPQNLLINER Unmodified 1451.8096 0.80962704 2037;2132 Q00536;Q07002 CDK16;CDK18 Cyclin-dependent kinase 16;Cyclin-dependent kinase 18 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 68.941 68.977 3 0.0037837 79224 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 44.616 36.231 38757000 0 0 0 2760100 2420400 0 4982100 4717100 2882400 0 5633100 0 4364400 0 10997000 8035 2037;2132 7348 67402;67403;67404;67405;67406;67407;67408;67409 53478;53479;53480;53481;53482;53483;53484 53482 7 DLKPQNLLINR Unmodified 1322.767 0.76703394 2036 Q00535 CDK5 Cyclin-dependent-like kinase 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 67.522 67.675 3 0.0015808 77357 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 68.107 51.575 56927000 0 0 0 0 2778200 6799400 4873800 3719900 4406700 0 6697600 6009300 3742100 4445500 13454000 8036 2036 7349 67410;67411;67412;67413;67414;67415;67416;67417;67418;67419 53485;53486;53487;53488;53489 53489 4 DLKPQNLLINTEGAIK Unmodified 1765.9938 0.993799 1180 P24941 CDK2 Cyclin-dependent kinase 2 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.56 80.621 3 0.00043012 93233 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 60.489 50.39 115460000 0 0 0 769050 2436900 14164000 3530800 8504600 5676200 15208000 11993000 11236000 3830600 7357600 30750000 8037 1180 7350 67420;67421;67422;67423;67424;67425;67426;67427;67428;67429;67430;67431 53490;53491;53492;53493;53494;53495;53496;53497;53498;53499;53500 53490 11 DLKPSNIFLVDTK Unmodified 1488.8188 0.81879474 1091 P19525 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 78.882 79.038 3 0.0017172 90966 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.116 49.12 31728000 0 0 0 0 0 0 2707000 4194600 0 4624500 3697000 0 3133900 4414200 8956500 8038 1091 7351 67432;67433;67434;67435;67436;67437;67438 53501;53502;53503;53504;53505;53506;53507 53503 7 DLKPSNLAVNEDCELK Unmodified 1843.8986 0.89857798 2611 Q16539 MAPK14 Mitogen-activated protein kinase 14 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 60.39 60.596 3 0.00071392 68569 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.591 36.989 35636000 0 0 0 0 1934700 0 3992900 4060900 0 0 6943500 7077300 0 0 11626000 8039 2611 7352 67439;67440;67441;67442;67443;67444 53508;53509;53510;53511;53512 53509 5 DLKPVLDSYVFNDGSSR Unmodified 1910.9374 0.93740633 4063 Q99816 TSG101 Tumor susceptibility gene 101 protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 80.994 81.104 3 0.00756 93901 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 34.274 20.647 33174000 0 0 0 0 0 8320800 3540400 7743400 0 8952900 0 0 4616400 0 0 8040 4063 7353 67445;67446;67447;67448;67449 53513;53514;53515 53514 3 DLLDDLK Unmodified 830.43855 0.43854874 873 P08758 ANXA5 Annexin A5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 73.493 73.534 2 0.026251 84748 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 79.116 0 130450000 0 0 0 8145100 0 8078900 0 0 0 0 25516000 0 0 20961000 67747000 8041 873 7354 67450;67451;67452;67453;67454 53516 53516 1 DLLDLLVEAK Unmodified 1127.6438 0.64379049 170 O00571;O15523 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 4 2 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 97.48 95.948 2 3.2512E-09 117380 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 159.37 141.33 479430000 191650000 255330000 5577600 736800 1085600 1392000 1144600 913580 1962300 6440700 3236900 0 1193300 3234300 5526900 8042 170 7355 67455;67456;67457;67458;67459;67460;67461;67462;67463;67464;67465;67466;67467;67468;67469;67470;67471;67472 53517;53518;53519;53520;53521;53522;53523;53524;53525;53526;53527;53528;53529;53530;53531;53532;53533;53534;53535;53536 53526 18 DLLDNQSQEEQRR Unmodified 1629.7707 0.77067535 329 O43432 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.424 29.616 3 0.010902 30846 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 33.782 17.057 91969000 0 0 0 5680000 3210500 6151200 5473500 6605700 5451900 10118000 7560900 13299000 8972800 8771500 10674000 8043 329 7356 67473;67474;67475;67476;67477;67478;67479;67480;67481;67482;67483;67484 53537;53538;53539;53540;53541;53542 53540 6 DLLEECK Unmodified 905.41643 0.41643309 3702 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes no 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 33.326 33.518 2 0.032282 36128 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.039 48.04 32852000 0 0 0 1646300 1001300 2956500 1288800 0 0 2972800 4561500 4857400 6031200 3405000 4131400 8044 3702 7357 67485;67486;67487;67488;67489;67490;67491;67492;67493;67494 53543;53544 53544 2 DLLENSMLCAGIPDSK Oxidation (M) 1777.8226 0.82263585 1608 P49862 KLK7 Kallikrein-7 yes yes 0 1 0 By MS/MS By matching By matching 10 0 3 1 1 1 76.89 76.835 2 3.8817E-06 88800 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 79.82 67.607 12037000 0 0 0 6170400 0 0 0 0 0 0 0 3351800 0 2515100 0 8045 1608 7358 67495;67496;67497 53545 53545 2587 1 DLLEPGCSVLLNHK Unmodified 1593.8185 0.81847717 1875 P62191 PSMC1 26S protease regulatory subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.76 3 1 23 1 2 1 2 2 2 2 2 1 2 2 2 2 2 2 76.09 75.439 2;3 1.1129E-19 87078 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 163.66 128.22 1602900000 147820000 662110000 136280000 29170000 34111000 82648000 17910000 25594000 23050000 86907000 90906000 132850000 16440000 27534000 89615000 8046 1875 7359 67498;67499;67500;67501;67502;67503;67504;67505;67506;67507;67508;67509;67510;67511;67512;67513;67514;67515;67516;67517;67518;67519;67520;67521;67522;67523;67524 53546;53547;53548;53549;53550;53551;53552;53553;53554;53555;53556;53557;53558;53559;53560;53561;53562;53563;53564;53565;53566;53567;53568;53569 53565 24 DLLETIETQK Unmodified 1188.6238 0.62378333 3780 Q96CN9 GCC1 GRIP and coiled-coil domain-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 79.782 75.07 2 0.0012629 93462 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 111.82 66.485 52705000 0 52705000 0 0 0 0 0 0 0 0 0 0 0 0 0 8047 3780 7360 67525 53570 53570 1 DLLFDPLGGVK Unmodified 1172.6441 0.64412484 4888 Q9UGR2 ZC3H7B Zinc finger CCCH domain-containing protein 7B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 91.038 91.133 2 0.0068368 105811 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 55.549 32.809 34164000 0 0 0 583440 0 3211200 2076200 3587600 2785800 4773500 3565700 0 2669200 3559700 7352000 8048 4888 7361 67526;67527;67528;67529;67530;67531;67532;67533;67534;67535 53571;53572;53573;53574;53575;53576;53577;53578;53579;53580;53581 53572 11 DLLFILTAK Unmodified 1032.6219 0.62193284 2608 Q16531 DDB1 DNA damage-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2.67 0.471 1 2 1 2 97.326 93.487 2 0.016553 115710 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.906 62.942 14027000 1964800 12062000 0 0 0 0 0 0 0 0 0 0 0 0 0 8049 2608 7362 67536;67537;67538 53582 53582 1 DLLGENFQK Unmodified 1062.5346 0.53457439 3149 Q86UK7 ZNF598 Zinc finger protein 598 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 59.655 59.721 2 0.02741 68063 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 49.418 25.263 63465000 0 0 0 4992200 3915500 4295600 4024400 4607900 4518300 6269300 8071700 6761500 8059900 7949200 0 8050 3149 7363 67539;67540;67541;67542;67543;67544;67545;67546;67547;67548;67549 53583;53584 53583 2 DLLGLCEQK Unmodified 1074.5379 0.53794521 237 O14980 XPO1 Exportin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64.114 62.993 2 0.0036305 72569 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 110.12 63.121 525790000 19583000 335180000 3195000 7109500 8747900 21828000 9265900 9851600 4572500 18543000 12777000 15446000 15668000 16663000 27358000 8051 237 7364 67550;67551;67552;67553;67554;67555;67556;67557;67558;67559;67560;67561;67562;67563;67564 53585;53586;53587;53588;53589;53590;53591;53592;53593;53594;53595;53596;53597;53598;53599;53600 53586 16 DLLHPSLEEEK Unmodified 1308.6561 0.65614609 3032 Q71UM5 RPS27L 40S ribosomal protein S27-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 58.117 58.232 2;3 8.8738E-21 65817 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 167.67 115.18 781420000 0 0 0 44644000 24612000 50784000 44136000 36898000 40896000 57973000 91288000 119130000 83840000 72387000 114840000 8052 3032 7365 67565;67566;67567;67568;67569;67570;67571;67572;67573;67574;67575;67576;67577;67578;67579;67580;67581;67582;67583;67584;67585;67586;67587;67588 53601;53602;53603;53604;53605;53606;53607;53608;53609;53610;53611;53612;53613;53614;53615;53616;53617;53618;53619;53620;53621;53622;53623;53624;53625;53626;53627;53628 53623 27 DLLHPSPEEEK Unmodified 1292.6248 0.62484596 1460 P42677 RPS27 40S ribosomal protein S27 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.26 3.23 5 2 24 1 4 2 2 2 2 2 2 2 2 2 2 2 2 2 41.469 40.488 2;3 5.7466E-16 44165 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 161.17 126.79 3498800000 31573000 941200000 51854000 124040000 112610000 166980000 163520000 149360000 163530000 181470000 260130000 341810000 300650000 209660000 300390000 8053 1460 7366 67589;67590;67591;67592;67593;67594;67595;67596;67597;67598;67599;67600;67601;67602;67603;67604;67605;67606;67607;67608;67609;67610;67611;67612;67613;67614;67615;67616;67617;67618;67619 53629;53630;53631;53632;53633;53634;53635;53636;53637;53638;53639;53640;53641;53642;53643;53644;53645;53646;53647;53648;53649;53650;53651;53652;53653;53654;53655;53656;53657;53658;53659;53660;53661;53662;53663;53664 53641 24 DLLHSEGSENEGPVSSSSSDCRETEELVGSNSSK Unmodified 3608.5656 0.5656357 4736 Q9NY27 PPP4R2 Serine/threonine-protein phosphatase 4 regulatory subunit 2 yes yes 0 0 1 By MS/MS 2 0 1 1 65.785 62.032 4 4.2024E-27 76862 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 79.021 77.355 7170000 0 0 7170000 0 0 0 0 0 0 0 0 0 0 0 0 8054 4736 7367 67620 53665;53666 53665 2 DLLHSGPGK Unmodified 922.48723 0.48723027 3061 Q7LBC6 KDM3B Lysine-specific demethylase 3B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 26.731 26.865 2 0.005264 29029 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 78.516 40.871 44406000 0 0 0 0 6150700 8853700 6977900 0 0 0 0 11996000 10428000 0 0 8055 3061 7368 67621;67622;67623;67624;67625;67626 53667;53668;53669;53670;53671;53672 53667 6 DLLIAYYDVDYEK Unmodified 1618.7767 0.77665516 1270 P30101 PDIA3 Protein disulfide-isomerase A3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 6 3 4 4 1 89.262 84.454 2;3 2.8913E-08 87742 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 109.6 92.967 1083100000 896170000 177440000 9452500 0 0 0 0 0 0 0 0 0 0 0 0 8056 1270 7369 67627;67628;67629;67630;67631;67632;67633;67634;67635 53673;53674;53675;53676;53677;53678;53679;53680;53681;53682;53683;53684;53685 53674 13 DLLIDEWK Unmodified 1030.5335 0.53351176 2611 Q16539 MAPK14 Mitogen-activated protein kinase 14 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 81.722 81.853 2 0.030437 94869 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.531 35.968 7258900 0 0 0 0 0 0 0 0 0 0 0 4794700 0 2464200 0 8057 2611 7370 67636;67637 53686;53687 53687 2 DLLKPIQDVNSLR Unmodified 1509.8515 0.85149185 5193 Q9Y4C1 KDM3A Lysine-specific demethylase 3A yes yes 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 76.488 76.567 3 0.0019283 87891 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.569 41.407 36232000 0 0 0 1770300 0 3579100 2688300 0 2757500 4363100 2960100 3622700 2313800 0 12177000 8058 5193 7371 67638;67639;67640;67641;67642;67643;67644;67645;67646 53688 53688 1 DLLLDPAWEK Unmodified 1198.6234 0.6233894 356;971;1359 O43707;P12814;P35609 ACTN4;ACTN1;ACTN2 Alpha-actinin-4;Alpha-actinin-1;Alpha-actinin-2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 83.277 83.41 2 0.010696 96691 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 55.549 32.809 47756000 0 0 0 0 0 2677300 0 0 0 0 9650600 5491000 0 6893300 23044000 8059 356;971;1359 7372 67647;67648;67649;67650;67651 53689;53690;53691;53692;53693 53689 5 DLLLEDLQDGEVR Unmodified 1513.7624 0.76240208 4595 Q9NR81 ARHGEF3 Rho guanine nucleotide exchange factor 3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 85.028 85.197 2 0.00079301 98472 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.596 53.481 9786800 0 0 0 0 0 0 0 1894800 0 2633700 2123500 0 0 0 3134800 8060 4595 7373 67652;67653;67654;67655 53694;53695;53696 53695 3 DLLLNTMSQEEK Oxidation (M) 1435.6865 0.68645994 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.4 3.68 4 1 10 1 3 1 1 1 1 1 1 1 1 1 1 1 55.397 53.562 2 2.7186E-14 65209 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 139.43 99.388 1099900000 19089000 764780000 5325700 21358000 0 32150000 24492000 16216000 0 30656000 34220000 60709000 37838000 0 53095000 8061 1986 7374 67656;67657;67658;67659;67660;67661;67662;67663;67664;67665;67666;67667;67668;67669;67670 53697;53698;53699;53700;53701;53702;53703;53704;53705;53706;53707;53708;53709;53710;53711;53712;53713;53714;53715;53716 53700 3213 20 DLLLNTMSQEEK Unmodified 1419.6915 0.69154532 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 72.627 71.447 2 7.5162E-24 90565 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 202.2 166.91 4443800000 63660000 3629900000 13100000 34655000 34801000 59038000 40369000 45787000 33757000 54677000 72116000 78960000 59748000 82339000 140920000 8062 1986 7374 67671;67672;67673;67674;67675;67676;67677;67678;67679;67680;67681;67682;67683;67684;67685;67686;67687 53717;53718;53719;53720;53721;53722;53723;53724;53725;53726;53727;53728;53729;53730;53731;53732;53733;53734 53725 17 DLLLQVGR Unmodified 912.53927 0.53926584 1275 P30291 WEE1 Wee1-like protein kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 69.84 69.882 2 0.01661 80481 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 66.993 31.792 29776000 0 0 0 1730000 2082900 2164800 3334600 2022200 2200600 5148500 3014300 3062000 2882000 2134400 0 8063 1275 7375 67688;67689;67690;67691;67692;67693;67694;67695;67696;67697;67698 53735;53736;53737;53738 53738 4 DLLLTSSYLSDSGSTGEHTK Unmodified 2110.0066 0.0066081055 860 P08195 SLC3A2 4F2 cell-surface antigen heavy chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.12 2.39 1 2 22 1 1 1 1 2 2 2 2 2 2 2 2 2 1 2 75.802 75.482 2;3 6.9759E-28 87332 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 99.407 90.243 444090000 412690 28301000 9014000 11201000 20067000 35762000 20488000 31456000 28687000 34239000 45686000 60227000 38455000 6560100 73532000 8064 860 7376 67699;67700;67701;67702;67703;67704;67705;67706;67707;67708;67709;67710;67711;67712;67713;67714;67715;67716;67717;67718;67719;67720;67721;67722;67723 53739;53740;53741;53742;53743;53744;53745;53746;53747;53748;53749;53750;53751;53752;53753;53754;53755;53756;53757;53758;53759;53760 53756 22 DLLMNDRSTGEK Oxidation (M) 1393.6507 0.65074314 2647 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 0 1 1 By MS/MS 3 0 1 1 28.251 23.967 3 0.011976 30035 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 51.286 31.645 6154200 0 6154200 0 0 0 0 0 0 0 0 0 0 0 0 0 8065 2647 7377 67724 53761 53761 4309 1 DLLMNDRSTGEK Unmodified 1377.6558 0.65582851 2647 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 38.266 33.482 3 0.045492 41390 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 38.634 16.16 23291000 0 23291000 0 0 0 0 0 0 0 0 0 0 0 0 0 8066 2647 7377 67725;67726 53762 53762 1 DLLNELESPKEEPIEE Unmodified 1882.9048 0.9047688 4266 Q9BZH6 WDR11 WD repeat-containing protein 11 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.9 3.81 3 1 6 1 2 1 1 1 1 1 1 1 85.02 83.246 2 2.2439E-06 103548 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 124.86 115.21 214670000 22850000 151160000 1383200 0 0 6422300 0 3673200 0 9048900 8464100 5476200 0 0 6190700 8067 4266 7378 67727;67728;67729;67730;67731;67732;67733;67734;67735;67736 53763;53764;53765;53766;53767;53768 53767 5 DLLNHAFFQEETGVRVELAEEDDGEK Unmodified 2989.3941 0.39412433 4393 Q9H4A3 WNK1 Serine/threonine-protein kinase WNK1 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 89.883 84.033 4 1.106E-08 107621 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.985 50.777 16214000 16214000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8068 4393 7379 67737;67738 53769;53770 53770 2 DLLNMYIETEGK Oxidation (M) 1440.6806 0.68064628 3633 Q92598 HSPH1 Heat shock protein 105 kDa yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 4.36 3.47 6 2 3 2 4 2 1 1 1 81.226 77.878 2 0.00044642 97087 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.611 72.824 239240000 25344000 179600000 12306000 0 0 0 0 0 0 0 5675500 0 0 6617100 9696900 8069 3633 7380 67739;67740;67741;67742;67743;67744;67745;67746;67747;67748;67749 53771;53772;53773;53774;53775;53776;53777;53778;53779;53780 53771 5133 9 DLLNMYIETEGK Unmodified 1424.6857 0.68573166 3633 Q92598 HSPH1 Heat shock protein 105 kDa yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.6 3.2 4 1 1 2 1 1 86.897 83.091 2 2.9208E-18 104844 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 158.47 128.66 415880000 29181000 372860000 5608400 0 0 0 0 0 0 0 0 0 0 0 8236100 8070 3633 7380 67750;67751;67752;67753;67754 53781;53782;53783;53784;53785;53786 53785 5 DLLPGPVTLVMERSEELNK Unmodified 2139.1246 0.12455517 3144 Q86U90 YRDC YrdC domain-containing protein, mitochondrial yes yes 0 0 1 By MS/MS 2 0 1 1 98.047 89.917 3 4.6661E-05 116034 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.737 36.742 14124000 14124000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8071 3144 7381 67755 53787 53787 1 DLLPVAVEILPVSEK Unmodified 1620.9338 0.9338245 3006 Q6ZRS2 SRCAP Helicase SRCAP yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.55 1 1 4 2 1 1 1 1 96.961 95.724 2 0.00014795 111997 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.313 61.521 41436000 0 34986000 0 0 0 0 0 1205800 974790 0 0 0 0 1110500 3158500 8072 3006 7382 67756;67757;67758;67759;67760;67761 53788;53789;53790 53789 3 DLLQADQLGSLK Unmodified 1299.7034 0.70343063 3548 Q8WUM0 NUP133 Nuclear pore complex protein Nup133 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 79.475 75.904 2 8.8559E-10 94148 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 139.43 76.014 263130000 0 260650000 2482400 0 0 0 0 0 0 0 0 0 0 0 0 8073 3548 7383 67762;67763;67764 53791;53792;53793 53791 3 DLLQDLK Unmodified 843.47018 0.47018322 2916 Q6P1J9 CDC73 Parafibromin yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.115 69.193 2 0.032282 78933 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.039 8.2624 443900000 0 0 0 16566000 22644000 30731000 23673000 26021000 23919000 36226000 45166000 47889000 51908000 59213000 59947000 8074 2916 7384 67765;67766;67767;67768;67769;67770;67771;67772;67773;67774;67775;67776 53794;53795;53796 53796 3 DLLQQLLPK Unmodified 1066.6386 0.63864553 1324 P32780 GTF2H1 General transcription factor IIH subunit 1 yes yes 0 0 0 By MS/MS 2 0 1 1 96.064 91.243 2 0.018417 113166 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.674 15.675 6112800 0 6112800 0 0 0 0 0 0 0 0 0 0 0 0 0 8075 1324 7385 67777 53797 53797 1 DLLQQMEEGLK Unmodified 1302.649 0.64895222 4620 Q9NS86 LANCL2 LanC-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 92.021 87.11 2 5.2148E-05 108121 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.71 43.895 92958000 0 92958000 0 0 0 0 0 0 0 0 0 0 0 0 0 8076 4620 7386 67778;67779 53798;53799 53798 2 DLLQQVPNAHK Unmodified 1261.6779 0.67788459 3101 Q7Z4S6 KIF21A Kinesin-like protein KIF21A yes yes 0 0 0 By MS/MS 2 0 1 1 53.803 48.011 3 0.042361 61915 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 35.33 26.375 66588000 0 66588000 0 0 0 0 0 0 0 0 0 0 0 0 0 8077 3101 7387 67780 53800 53800 1 DLLSDWLDSTLGCDVTDNSIFSK Unmodified 2600.1952 0.19521351 1579 P49589 CARS Cysteine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By matching 2.33 0.471 2 1 1 1 1 100.89 96.176 3 5.8431E-08 121936 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.036 65.324 47735000 44202000 1755100 1777700 0 0 0 0 0 0 0 0 0 0 0 0 8078 1579 7388 67781;67782;67783 53801;53802;53803;53804;53805 53804 5 DLLSSVSR Unmodified 875.47125 0.47124585 1100 P20073 ANXA7 Annexin A7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 53.956 54.165 2 0.016434 61186 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 67.277 13.387 260380000 0 0 0 0 5663200 28054000 13083000 13680000 7412800 40469000 27050000 28399000 22095000 24296000 50177000 8079 1100 7389 67784;67785;67786;67787;67788;67789;67790;67791;67792;67793;67794 53806;53807;53808;53809;53810;53811 53807 4 DLLSTQPSETLASSDSFASTQPTHSWK Unmodified 2920.3727 0.37266061 563 O75940 SMNDC1 Survival of motor neuron-related-splicing factor 30 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.71 3.81 2 1 4 2 1 1 1 2 81.362 79.696 3 2.5916E-90 98600 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 137.03 123.58 126660000 0 95355000 7561000 0 0 0 0 0 0 5165900 0 4769600 0 0 13812000 8080 563 7390 67795;67796;67797;67798;67799;67800;67801 53812;53813;53814;53815;53816;53817;53818;53819;53820 53814 8 DLLTELQK Unmodified 958.53351 0.53351176 3151 Q86UP2 KTN1 Kinectin yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 76.174 71.977 2 0.023196 89839 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.671 15.678 28523000 0 28523000 0 0 0 0 0 0 0 0 0 0 0 0 0 8081 3151 7391 67802;67803 53821 53821 1 DLLTIPPGFK Unmodified 1099.6277 0.6277465 2540 Q15477 SKIV2L Helicase SKI2W yes yes 0 0 0 By MS/MS 2 0 1 1 89.579 84.706 2 0.0074264 105853 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.219 54.114 12262000 0 12262000 0 0 0 0 0 0 0 0 0 0 0 0 0 8082 2540 7392 67804 53822;53823 53823 2 DLLVDQTIEK Unmodified 1172.6289 0.62886871 5293 Q9Y6R0 NUMBL Numb-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.35 2.12 1 1 21 2 2 2 2 1 2 1 2 2 2 2 1 2 62.07 61.667 2 0.0044926 70304 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 72.643 0 322370000 0 28902000 0 20459000 21352000 26128000 10704000 28361000 9801500 11576000 38709000 32888000 33563000 9709000 50222000 8083 5293 7393 67805;67806;67807;67808;67809;67810;67811;67812;67813;67814;67815;67816;67817;67818;67819;67820;67821;67822;67823;67824;67825;67826;67827 53824;53825;53826;53827;53828;53829;53830;53831;53832;53833;53834;53835;53836;53837;53838;53839;53840;53841;53842;53843;53844;53845 53843 20 DLLVENVPYCDAPTQK Unmodified 1860.8928 0.89276432 2803 Q5U5X0 LYRM7 Complex III assembly factor LYRM7 yes yes 0 0 0 By MS/MS 2 0 1 1 78.689 73.953 2 3.6004E-50 92170 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 184.1 158.66 41548000 0 41548000 0 0 0 0 0 0 0 0 0 0 0 0 0 8084 2803 7394 67828 53846 53846 1 DLLVGPGVELLLTPR Unmodified 1590.9345 0.9344932 3693 Q92974 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 97.489 97.636 2 4.0925E-14 113636 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 117.23 110.85 21171000 0 0 0 0 0 0 0 1033300 1315900 4297800 3759300 2113100 0 1706400 6945200 8085 3693 7395 67829;67830;67831;67832;67833;67834;67835 53847;53848;53849;53850;53851;53852;53853 53847 7 DLLVLLNEILEQVK Unmodified 1637.9604 0.9603736 4079 Q9BPX3 NCAPG Condensin complex subunit 3 yes yes 0 0 0 By MS/MS 3 0 1 1 106.6 102.92 2 4.8809E-14 123739 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 113.63 98.485 3477000 0 3477000 0 0 0 0 0 0 0 0 0 0 0 0 0 8086 4079 7396 67836 53854 53854 1 DLMACAQTGSGK Oxidation (M) 1253.538 0.53802156 170 O00571;O15523;Q9NQI0 DDX3X;DDX3Y;DDX4 ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y;Probable ATP-dependent RNA helicase DDX4 yes no 0 1 0 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 18.177 18.369 2 0.0022339 18030 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.518 36.364 3571300 0 0 0 897200 0 0 0 738380 0 0 0 1935700 0 0 0 8087 170 7397 67837;67838;67839;67840 53855;53856;53857 53857 236 3 DLMTDLKSEISGDLAR Unmodified 1762.8771 0.87711426 857 P08133 ANXA6 Annexin A6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 62.642 62.921 3 0.010426 71993 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 26.435 22.214 21332000 0 0 0 0 0 4677400 0 0 0 0 0 0 0 0 16655000 8088 857 7398 67841;67842;67843;67844 53858;53859;53860 53858 3 DLMVGDEASELR Oxidation (M) 1349.6133 0.613295 1836 P61160 ACTR2 Actin-related protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 57.822 57.388 2 1.7053E-05 65555 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 100.48 71.315 266150000 0 24624000 0 21324000 14198000 23991000 17462000 13622000 0 0 35097000 33420000 29468000 20645000 32298000 8089 1836 7399 67845;67846;67847;67848;67849;67850;67851;67852;67853;67854;67855 53861;53862;53863;53864;53865;53866;53867;53868;53869;53870;53871;53872;53873;53874;53875;53876 53861 2976 16 DLMVGDEASELR Unmodified 1333.6184 0.61838038 1836 P61160 ACTR2 Actin-related protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.164 66.248 2 2.4435E-05 76639 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 92.538 66.6 207490000 0 0 0 9710100 8490800 18963000 13171000 12490000 9057100 13849000 24272000 21635000 10853000 17653000 47347000 8090 1836 7399 67856;67857;67858;67859;67860;67861;67862;67863;67864;67865;67866;67867 53877;53878;53879;53880;53881;53882;53883;53884;53885;53886;53887;53888 53887 12 DLNAAEALQR Unmodified 1099.5622 0.56218613 241 O15020 SPTBN2 Spectrin beta chain, non-erythrocytic 2 yes yes 0 0 0 By MS/MS 10 0 1 1 50.898 50.267 2 0.024578 57517 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 44.863 14.697 3606900 0 0 0 3606900 0 0 0 0 0 0 0 0 0 0 0 8091 241 7400 67868 53889 53889 1 DLNASVVNIDTSTEIK Unmodified 1717.8734 0.87340909 2996 Q6YHU6 THADA Thyroid adenoma-associated protein yes yes 0 0 0 By MS/MS 2 0 1 1 79.083 74.347 2 0.00062502 92591 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.039 68.188 22841000 0 22841000 0 0 0 0 0 0 0 0 0 0 0 0 0 8092 2996 7401 67869 53890 53890 1 DLNAVAFR Unmodified 904.47667 0.47666558 1006 P14735 IDE Insulin-degrading enzyme yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 2 2 1 1 1 56.253 56.419 2 0.0081134 65362 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 87.323 32.797 183950000 0 0 0 68416000 0 8144300 5119200 16586000 0 8588500 24907000 0 7732900 14044000 30409000 8093 1006 7402 67870;67871;67872;67873;67874;67875;67876;67877;67878;67879;67880;67881 53891;53892;53893;53894;53895;53896;53897;53898;53899;53900 53900 10 DLNCVPEIADTLGAVAK Unmodified 1784.8978 0.8978497 208 O14744 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 90.18 90.282 2 0.010245 104787 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.006 22.793 33146000 0 0 0 0 1343100 1077500 0 1385000 1771400 4011500 3594100 3799100 1677400 3197600 11289000 8094 208 7403 67882;67883;67884;67885;67886;67887;67888;67889;67890;67891 53901;53902;53903 53903 3 DLNDLVMK Oxidation (M) 962.47428 0.47428232 4256 Q9BZ19 ANKRD60 Ankyrin repeat domain-containing protein 60 yes yes 0 1 0 By matching By MS/MS 10 0 2 1 1 78.363 78.31 2 0.0089126 90421 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 72.138 11.78 7956900 0 0 0 0 1342900 0 0 6614000 0 0 0 0 0 0 0 8095 4256 7404 67892;67893 53904 53904 5720 1 DLNECAREPLYEGTADVEK Unmodified 2208.0005 0.0004768701 2866 Q6AWC2 WWC2 Protein WWC2 yes yes 0 0 1 By MS/MS 2 0 1 1 64.678 58.761 3 0.00043116 75329 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 52.185 44.909 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8096 2866 7405 67894 53905 53905 1 DLNFLEDNPSLK Unmodified 1403.6933 0.69325988 4331 Q9H0K1 SIK2 Serine/threonine-protein kinase SIK2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 81.793 81.922 2 0.00018736 94847 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 84.658 61.918 20658000 0 0 0 0 0 3245400 0 0 0 6752900 4903400 0 0 0 5756200 8097 4331 7406 67895;67896;67897;67898;67899;67900;67901;67902 53906;53907;53908;53909;53910;53911;53912;53913 53909 8 DLNGIDLTPVQDTPVASRK Unmodified 2038.0695 0.069483134 3758 Q96BJ3 AIDA Axin interactor, dorsalization-associated protein yes yes 0 0 1 By MS/MS 3 0 1 1 78.419 75 3 0.012912 90024 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 30.489 20.15 2704300 0 2704300 0 0 0 0 0 0 0 0 0 0 0 0 0 8098 3758 7407 67903 53914 53914 1 DLNGILLLDTALQTPVSK Unmodified 1910.0724 0.072443247 4584 Q9NR09 BIRC6 Baculoviral IAP repeat-containing protein 6 yes yes 0 0 0 By MS/MS 2 0 1 1 100.45 95.734 2 0.012018 118358 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 46.66 31.652 7341900 0 7341900 0 0 0 0 0 0 0 0 0 0 0 0 0 8099 4584 7408 67904 53915 53915 0 DLNGPGLSR Unmodified 927.47739 0.47739386 2810 Q5VT52 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 32.063 32.267 2 0.013737 35159 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 59.35 31.243 415040000 0 0 0 22766000 567430 0 37780000 36354000 32875000 36643000 60028000 60526000 48494000 34807000 44204000 8100 2810 7409 67905;67906;67907;67908;67909;67910;67911;67912;67913;67914;67915 53916;53917;53918;53919;53920;53921;53922 53916 6 DLNHVCVISETGK Unmodified 1470.7137 0.71367774 729 P00492 HPRT1 Hypoxanthine-guanine phosphoribosyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 48.01 48.183 2;3 1.9261E-09 53249 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 138.24 95.153 118580000 0 0 0 7681000 3159300 8705500 0 0 4869900 7646800 26661000 20561000 8660400 18928000 11709000 8101 729 7410 67916;67917;67918;67919;67920;67921;67922;67923;67924;67925 53923;53924;53925;53926;53927 53923 4 DLNLGEMK Oxidation (M) 934.44298 0.44298219 2696 Q53EL6 PDCD4 Programmed cell death protein 4 yes yes 0 1 0 By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 32.69 32.951 2 0.02105 34812 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.611 11.697 37915000 0 0 0 0 0 5492000 6702600 0 2380000 4546600 6075100 0 0 5155400 7563700 8102 2696 7411 67926;67927;67928;67929;67930;67931;67932 53928 53928 1 DLNPFTPLVGIR Unmodified 1340.7452 0.74523587 3144 Q86U90 YRDC YrdC domain-containing protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 92.179 92.311 2 0.0030851 106944 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.353 38.613 19729000 0 0 0 0 0 3580600 1275100 1867600 0 4071000 1840100 0 1293600 1590000 4210800 8103 3144 7412 67933;67934;67935;67936;67937;67938;67939;67940 53929;53930;53931;53932;53933;53934;53935;53936 53933 8 DLNSDMDSILASLK Unmodified 1520.7392 0.73922379 1426 P40939 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 0 0 0 By MS/MS 2 0 1 1 98.802 94.068 2 6.0558E-06 116429 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.44 79.835 29147000 0 29147000 0 0 0 0 0 0 0 0 0 0 0 0 0 8104 1426 7413 67941 53937 53937 1 DLNSQADSLMTSSAFDTSQVK Oxidation (M) 2260.0165 0.016520865 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 1 0 By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 70.785 70.268 2 1.1571E-61 80635 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 132.08 120.17 74588000 0 30017000 0 2444200 3041900 3806900 4598600 0 0 5786800 6511600 7787700 0 3460200 7133700 8105 2344 7414 67942;67943;67944;67945;67946;67947;67948;67949;67950;67951 53938;53939;53940;53941 53941 3808 4 DLNSQADSLMTSSAFDTSQVK Unmodified 2244.0216 0.021606243 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 1 3 1 2 1 1 2 2 81.668 80.623 2;3 8.5388E-83 98054 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 149.44 135.18 703900000 0 624240000 0 0 0 0 0 0 0 9400900 15313000 0 4017800 12716000 38212000 8106 2344 7414 67952;67953;67954;67955;67956;67957;67958;67959;67960;67961;67962;67963;67964 53942;53943;53944;53945;53946;53947;53948;53949;53950;53951;53952;53953;53954;53955;53956;53957 53945 15 DLNSQLEYLR Unmodified 1249.6303 0.63026569 28 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 74.101 74.193 2 0.010746 85527 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 55.461 22.199 32141000 0 0 0 0 0 9175000 0 7877800 0 15088000 0 0 0 0 0 8107 28 7415 67965;67966;67967;67968 53958;53959;53960 53958 3 DLNSVVIAVK Unmodified 1056.6179 0.61791009 2988 Q6VY07 PACS1 Phosphofurin acidic cluster sorting protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 75.216 70.91 2 0.0048548 88491 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.639 47.536 34963000 0 34963000 0 0 0 0 0 0 0 0 0 0 0 0 0 8108 2988 7416 67969;67970 53961;53962 53961 2 DLNSYLEDK Unmodified 1095.5084 0.50841922 319 O43324 EEF1E1 Eukaryotic translation elongation factor 1 epsilon-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 58.209 57.548 2 0.0037823 64937 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 88.948 69.311 1044700000 0 815970000 0 8305300 12686000 19664000 14964000 10113000 16598000 23901000 27170000 21677000 17332000 17275000 39028000 8109 319 7417 67971;67972;67973;67974;67975;67976;67977;67978;67979;67980;67981;67982;67983;67984 53963;53964;53965;53966;53967;53968;53969;53970;53971;53972;53973;53974;53975;53976;53977;53978;53979;53980 53976 18 DLNYCFSGMSDHR Oxidation (M) 1616.6348 0.6347755 1309;1773 P55795;P31943 HNRNPH2;HNRNPH1 Heterogeneous nuclear ribonucleoprotein H2;Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 14 1 2 1 2 1 2 2 2 1 47.189 47.508 2;3 0.00028874 52690 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 66.393 65.984 178570000 0 0 0 0 0 16039000 16237000 6269000 0 26478000 4019500 42583000 28286000 29391000 9265400 8110 1773;1309 7418 67985;67986;67987;67988;67989;67990;67991;67992;67993;67994;67995;67996;67997;67998 53981;53982;53983;53984;53985;53986;53987;53988 53984 1935 5 DLNYCFSGMSDHR Unmodified 1600.6399 0.63986087 1309;1773 P55795;P31943 HNRNPH2;HNRNPH1 Heterogeneous nuclear ribonucleoprotein H2;Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 1 2 1 1 1 2 1 2 2 2 2 60.83 60.99 2;3 0.00030564 68711 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 81.865 68.512 199890000 0 0 0 6879900 3791200 13198000 6767200 9149400 7611200 16303000 17522000 25315000 16634000 20272000 56452000 8111 1773;1309 7418 67999;68000;68001;68002;68003;68004;68005;68006;68007;68008;68009;68010;68011;68012;68013;68014;68015;68016 53989;53990;53991;53992;53993;53994;53995;53996;53997;53998 53995 8 DLPDEIPLPLVIGTK Unmodified 1618.9182 0.91817444 2801 Q5TKA1 LIN9 Protein lin-9 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 3 1 1 1 1 1 1 1 1 1 1 1 97.36 96.53 2;3 0.000407 116942 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.252 59.027 214200000 0 165860000 0 0 2071900 2184000 1471400 3011300 2437900 9012800 6764000 4639600 2150900 3530200 11075000 8112 2801 7419 68017;68018;68019;68020;68021;68022;68023;68024;68025;68026;68027;68028;68029;68030 53999;54000;54001;54002;54003;54004;54005;54006;54007;54008;54009;54010 54001 11 DLPDGPDAPADR Unmodified 1237.5575 0.55749468 683 O95721 SNAP29 Synaptosomal-associated protein 29 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 37.365 37.495 2 0.0002069 41386 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 85.377 54.807 88714000 0 0 0 5321100 7204600 7206200 6655600 6023000 5243500 6587000 11503000 15271000 9034900 8664300 0 8113 683 7420 68031;68032;68033;68034;68035;68036;68037;68038;68039;68040;68041 54011;54012;54013;54014;54015;54016;54017;54018;54019;54020;54021 54016 11 DLPDGPDAPADRQQYLR Unmodified 1925.9232 0.92315325 683 O95721 SNAP29 Synaptosomal-associated protein 29 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 55.212 55.822 3 0.0010622 63028 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 49.559 33.675 22522000 0 0 0 0 0 0 0 0 0 0 0 11267000 0 0 11255000 8114 683 7421 68042;68043;68044 54022;54023;54024 54024 3 DLPDILNK Unmodified 926.5073 0.50729701 2880 Q6GYQ0 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 70.895 70.309 2 0.018283 80785 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.567 42.796 84830000 0 37690000 0 2974100 3257400 3136900 3730200 4003000 3766900 3886500 3831000 5444700 4097100 3438200 5574800 8115 2880 7422 68045;68046;68047;68048;68049;68050;68051;68052;68053;68054;68055;68056;68057;68058 54025;54026;54027;54028 54027 4 DLPDSQQQHQSSK Unmodified 1496.6855 0.68554874 1189 P25440 BRD2 Bromodomain-containing protein 2 yes yes 0 0 0 By MS/MS 2.5 0.5 2 2 4 11.548 8.2133 2;3 3.2555E-20 11331 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 155.33 116.32 87073000 0 87073000 0 0 0 0 0 0 0 0 0 0 0 0 0 8116 1189 7423 68059;68060;68061;68062 54029;54030;54031 54030 2 DLPDVQELITQVR Unmodified 1524.8148 0.814772 4895 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 1 1 1 2 2 1 1 2 2 92.461 92.578 2;3 5.3185E-51 107529 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 179.57 150.85 110030000 0 0 0 0 2822100 3046800 2707600 8717600 5050300 24359000 14338000 6616300 1680600 7505900 33184000 8117 4895 7424 68063;68064;68065;68066;68067;68068;68069;68070;68071;68072;68073;68074;68075;68076;68077 54032;54033;54034;54035;54036;54037;54038;54039;54040;54041;54042;54043;54044;54045;54046;54047;54048;54049;54050;54051;54052;54053 54033 22 DLPDVQELITQVRSEK Unmodified 1868.9844 0.98435652 4895 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 yes yes 0 0 1 By MS/MS 2 0 1 1 95.123 86.993 3 0.0001578 112465 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.055 52.306 8993300 8993300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8118 4895 7425 68078 54054 54054 1 DLPEEYLSAIYNEIAGK Unmodified 1923.9466 0.94657403 5277 Q9Y6D6 ARFGEF1 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 101.86 97.146 3 0.015008 120122 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 29.687 19.49 8630700 0 8630700 0 0 0 0 0 0 0 0 0 0 0 0 0 8119 5277 7426 68079 54055 54055 0 DLPEEYLSSIYEEIEGK Unmodified 2012.9466 0.94663361 5276 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 100.03 91.898 3 0.00056465 118415 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 59.003 49.956 11853000 11853000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8120 5276 7427 68080;68081 54056;54057 54057 2 DLPEEYLSSIYEEIEGKK Unmodified 2141.0416 0.041596628 5276 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 yes yes 0 0 1 By MS/MS 2 0 1 1 99.007 90.877 3 5.8446E-05 117204 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.482 47.524 15385000 15385000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8121 5276 7428 68082 54058 54058 1 DLPEGAVK Unmodified 827.43888 0.43888309 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 28.49 28.69 2 0.012884 30359 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 73.616 15.449 233520000 0 0 0 15353000 15949000 19941000 15747000 19389000 0 23570000 25031000 34269000 22016000 22905000 19352000 8122 3641 7429 68083;68084;68085;68086;68087;68088;68089;68090;68091;68092;68093 54059;54060;54061;54062;54063;54064 54062 6 DLPEHAVLK Unmodified 1020.5604 0.56039521 2046 Q00839 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 6 12 2 2 2 1 1 1 1 1 1 1 1 1 1 1 1 40.632 39.872 2 0.0030483 45004 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 91.318 56.023 19220000000 104420000 991980000 253770000 1088400000 1209100000 1381600000 1204500000 915650000 1138200000 1718500000 1902000000 2193000000 1940300000 1267900000 1910500000 8123 2046 7430 68094;68095;68096;68097;68098;68099;68100;68101;68102;68103;68104;68105;68106;68107;68108;68109;68110;68111 54065;54066;54067;54068;54069;54070;54071;54072;54073;54074;54075;54076;54077;54078;54079;54080;54081;54082;54083;54084;54085;54086;54087;54088;54089;54090;54091 54087 26 DLPELALDTPR Unmodified 1238.6507 0.65066678 2696 Q53EL6 PDCD4 Programmed cell death protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.259 79.308 2 0.00035377 91612 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 102.06 70.127 246120000 0 0 0 10119000 10043000 22683000 12433000 17725000 0 27146000 27881000 35004000 22130000 17730000 43222000 8124 2696 7431 68112;68113;68114;68115;68116;68117;68118;68119;68120;68121;68122 54092;54093;54094;54095;54096;54097;54098;54099;54100;54101;54102 54093 11 DLPFEPSK Unmodified 931.4651 0.46509784 4455 Q9H8V3 ECT2 Protein ECT2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 57.101 57.293 2 0.017183 65210 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.073 31.249 80046000 0 0 0 0 5654500 6374400 6891700 4796800 4578900 7568400 9170700 8406200 6234200 6121800 14248000 8125 4455 7432 68123;68124;68125;68126;68127;68128;68129;68130;68131;68132;68133 54103;54104;54105;54106;54107;54108;54109;54110;54111;54112 54103 10 DLPFIVSHR Unmodified 1082.5873 0.58727866 1243 P29144 TPP2 Tripeptidyl-peptidase 2 yes yes 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 70.726 70.858 2 0.045968 81063 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.083 36.259 25483000 0 0 0 1417400 0 0 0 1599200 0 0 3742500 4857900 2666600 2969000 8230400 8126 1243 7433 68134;68135;68136;68137;68138;68139;68140 54113 54113 1 DLPGVRELFEK Unmodified 1301.698 0.69795133 5001 Q9ULR0 ISY1 Pre-mRNA-splicing factor ISY1 homolog yes yes 0 0 1 By MS/MS 2 0 1 1 86.066 77.936 3 0.021541 101605 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 39.917 16.066 7614700 7614700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8127 5001 7434 68141 54114 54114 1 DLPLAQGIK Unmodified 953.55458 0.55458155 1573 P49419 ALDH7A1 Alpha-aminoadipic semialdehyde dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64.802 63.682 2 0.014232 72857 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 58.604 36.473 808130000 25397000 685470000 6605400 7759900 3197200 4860800 4556200 4796400 3066400 5340200 10583000 11489000 5416500 9440000 20158000 8128 1573 7435 68142;68143;68144;68145;68146;68147;68148;68149;68150;68151;68152;68153;68154;68155;68156 54115;54116;54117;54118;54119;54120;54121 54119 7 DLPLLLFR Unmodified 985.59605 0.59605244 304 O43175 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 1 1 1 2 1 1 2 95.625 95.71 2 0.006533 111072 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 100.07 83.14 795110000 0 0 0 19977000 22458000 96120000 34757000 45998000 40290000 83349000 52544000 51852000 39111000 66654000 242000000 8129 304 7436 68157;68158;68159;68160;68161;68162;68163;68164;68165;68166;68167;68168;68169;68170 54122;54123;54124;54125;54126;54127;54128;54129;54130;54131;54132;54133;54134;54135;54136;54137 54125 14 DLPNIEVR Unmodified 954.51345 0.51344502 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.949 61.053 2 0.011381 69595 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 77.058 46.496 114460000 0 0 0 8152500 6752300 7926400 7414600 10235000 4850300 11334000 12919000 9728200 9597000 9370700 16179000 8130 1201 7437 68171;68172;68173;68174;68175;68176;68177;68178;68179;68180;68181;68182 54138;54139;54140 54139 3 DLPPLVVQR Unmodified 1035.6077 0.60767975 2964 Q6QNY0 BLOC1S3 Biogenesis of lysosome-related organelles complex 1 subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.945 71.019 2 0.021281 81460 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 52.403 30.272 119240000 0 0 0 6344400 7576700 6719300 8403400 6811500 7019500 10085000 12215000 12849000 14112000 10272000 16831000 8131 2964 7438 68183;68184;68185;68186;68187;68188;68189;68190;68191;68192;68193;68194 54141;54142 54142 2 DLPPPPPPPQPPAPIQPQSVPPPIQPEAEK Unmodified 3154.6703 0.6702866 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 1 2 2 2 2 2 2 2 2 2 2 2 85.836 85.922 3;4 0.00012159 99971 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 26.187 24.157 245360000 0 0 0 4748100 21731000 14990000 17050000 16399000 17407000 24923000 27253000 32132000 19305000 19587000 29835000 8132 5216 7439 68195;68196;68197;68198;68199;68200;68201;68202;68203;68204;68205;68206;68207;68208;68209;68210;68211;68212;68213;68214;68215;68216;68217 54143;54144;54145;54146;54147;54148;54149;54150;54151;54152;54153 54147 11 DLPPVSGSIIWAK Unmodified 1381.7606 0.76055158 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 85.355 85.462 2 0.0044728 98874 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 50.284 24.725 75942000 0 0 0 0 3965100 7292900 5677700 5537700 5009100 6714000 6881100 9197700 6535300 7276500 11855000 8133 2392 7440 68218;68219;68220;68221;68222;68223;68224;68225;68226;68227;68228 54154;54155;54156;54157;54158 54154 4 DLPQIINK Unmodified 939.53893 0.53893149 3441 Q8NF91 SYNE1 Nesprin-1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.657 77.715 2 0.0044499 89862 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 110.63 47.916 119440000 0 0 0 4825000 6501700 8922600 8368600 10588000 11033000 9587000 9276600 12588000 9912500 10906000 16927000 8134 3441 7441 68229;68230;68231;68232;68233;68234;68235;68236;68237;68238;68239;68240 54159;54160;54161;54162;54163;54164;54165;54166;54167;54168;54169 54159 11 DLPRWLEENPEFAVAPDWTDIVK Unmodified 2739.3544 0.35443177 4814 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 0 0 1 By MS/MS 2 0 1 1 99.428 91.298 3 0.00038996 117746 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.485 53.329 6984100 6984100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8135 4814 7442 68241 54170 54170 1 DLPSADSVQYR Unmodified 1249.5939 0.59388018 3643 Q92621 NUP205 Nuclear pore complex protein Nup205 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 49.247 49.448 2 0.0032777 55931 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 64.297 43.396 70962000 0 0 0 0 0 10853000 6986400 10965000 0 9744200 18541000 0 13873000 0 0 8136 3643 7443 68242;68243;68244;68245;68246;68247;68248 54171;54172;54173;54174;54175;54176 54174 6 DLPSDPERLLPEEDLDVK Unmodified 2079.0372 0.037179952 413 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.83 3.67 3 1 2 1 2 1 1 1 84.898 81.845 3 4.9825E-05 99687 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 77.468 57.915 238500000 39480000 170570000 15280000 0 0 0 0 0 0 3947900 0 0 0 0 9225500 8137 413 7444 68249;68250;68251;68252;68253;68254 54177;54178;54179;54180;54181;54182 54182 5 DLPSVQLLMK Oxidation (M) 1158.6318 0.6318456 241 O15020 SPTBN2 Spectrin beta chain, non-erythrocytic 2 yes yes 0 1 0 By MS/MS 2 0 1 1 81.089 76.384 2 0.034754 95083 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.118 36.088 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8138 241 7445 68255 54183 54183 1 DLPTSFVK Unmodified 905.48583 0.48583328 1455 P42356 PI4KA Phosphatidylinositol 4-kinase alpha yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 65.954 60.632 2 0.015258 77537 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.262 48.246 25850000 0 25850000 0 0 0 0 0 0 0 0 0 0 0 0 0 8139 1455 7446 68256;68257 54184;54185 54184 2 DLPVGLEELR Unmodified 1139.6186 0.61863837 1436 P41229;Q9BY66 KDM5C;KDM5D Lysine-specific demethylase 5C;Lysine-specific demethylase 5D yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 80.791 80.801 2 0.025606 93612 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 52.579 41.068 33802000 0 0 0 1340300 1787500 4471300 0 0 0 0 3608700 5967500 2327000 4296000 10004000 8140 1436 7447 68258;68259;68260;68261;68262;68263;68264;68265 54186;54187;54188;54189 54186 4 DLPVSEQQER Unmodified 1199.5782 0.57823012 5036 Q9UNM6 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 2 1 1 1 1 1 1 1 1 1 1 1 30.86 31.008 2 0.0014849 33866 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 122.52 107.74 833540000 0 0 0 46915000 72974000 78736000 30789000 24743000 21625000 131530000 118550000 173610000 29897000 41398000 62772000 8141 5036 7448 68266;68267;68268;68269;68270;68271;68272;68273;68274;68275;68276;68277;68278 54190;54191;54192;54193;54194;54195;54196;54197;54198;54199;54200;54201 54192 10 DLQAEALCK Unmodified 1046.5066 0.50664508 4070 Q99933 BAG1 BAG family molecular chaperone regulator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 40.777 40.219 2 0.0034522 45161 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 94.302 42.515 344470000 0 251210000 0 0 6345200 6522600 6697700 5327800 4982800 6420300 10372000 13116000 7339700 10965000 15175000 8142 4070 7449 68279;68280;68281;68282;68283;68284;68285;68286;68287;68288;68289;68290;68291;68292 54202;54203;54204;54205;54206;54207;54208;54209;54210;54211;54212;54213 54210 12 DLQANVEHLVQK Unmodified 1392.7361 0.73612775 861 P08237 PFKM ATP-dependent 6-phosphofructokinase, muscle type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 68.113 68.194 2;3 1.1607E-26 78357 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 179.19 136.11 974570000 0 0 0 34149000 37501000 73705000 51780000 85092000 48604000 100980000 92503000 103600000 69841000 78195000 198630000 8143 861 7450 68293;68294;68295;68296;68297;68298;68299;68300;68301;68302;68303;68304;68305;68306;68307;68308;68309;68310;68311;68312;68313;68314;68315;68316 54214;54215;54216;54217;54218;54219;54220;54221;54222;54223;54224;54225;54226 54216 6 DLQDELAGNSEQRK Unmodified 1601.7645 0.76452734 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.16 3.73 5 2 12 1 5 1 1 1 1 1 1 1 1 1 1 1 1 1 42.625 40.991 2;3 2.6382E-09 52751 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.46 76.133 426170000 16940000 83876000 6402000 17536000 16451000 25673000 25587000 25576000 17401000 33746000 36076000 37607000 21702000 23554000 38039000 8144 5071 7451 68317;68318;68319;68320;68321;68322;68323;68324;68325;68326;68327;68328;68329;68330;68331;68332;68333;68334;68335 54227;54228;54229;54230;54231;54232;54233;54234;54235;54236;54237;54238;54239;54240;54241;54242;54243;54244 54232 16 DLQDVLK Unmodified 829.45453 0.45453316 1331 P33981 TTK Dual specificity protein kinase TTK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 56.862 56.221 2 0.029815 64288 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 75.311 18.8 187540000 0 47733000 0 13406000 13001000 16993000 17106000 18021000 14084000 22988000 0 0 0 0 24209000 8145 1331 7452 68336;68337;68338;68339;68340;68341;68342;68343;68344 54245;54246;54247;54248;54249 54249 5 DLQEFIPLINQITAK Unmodified 1741.9614 0.96143623 344 O43592 XPOT Exportin-T yes yes 0 0 0 By MS/MS 2 0 1 1 100.81 96.099 3 0.0041603 118785 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 47.548 37.633 10216000 0 10216000 0 0 0 0 0 0 0 0 0 0 0 0 0 8146 344 7453 68345 54250 54250 1 DLQEFVPFGR Unmodified 1206.6033 0.60332266 4345 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 84.823 84.951 2 0.0016854 98395 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 89.355 68.055 16976000 0 0 0 0 0 4599600 0 0 2175500 0 0 0 0 2759800 7440800 8147 4345 7454 68346;68347;68348;68349;68350 54251;54252;54253;54254;54255 54251 5 DLQEPVVPDPDVSIYLPVLK Unmodified 2235.2039 0.20385135 445 O60921 HUS1 Checkpoint protein HUS1 yes yes 0 0 0 By MS/MS 2.5 0.5 2 2 4 98.879 94.847 2;3 4.2708E-08 116956 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.481 90.853 119870000 0 119870000 0 0 0 0 0 0 0 0 0 0 0 0 0 8148 445 7455 68351;68352;68353;68354 54256;54257;54258;54259 54258 4 DLQEQDADAGSER Unmodified 1432.6066 0.60662972 2914 Q6P158 DHX57 Putative ATP-dependent RNA helicase DHX57 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 19.264 19.527 2 0.002012 18783 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 73.067 68.101 4674200 0 0 0 0 0 0 0 0 919840 0 0 0 2037700 1716700 0 8149 2914 7456 68355;68356;68357 54260;54261 54261 2 DLQEVIELTK Unmodified 1186.6445 0.64451877 563 O75940 SMNDC1 Survival of motor neuron-related-splicing factor 30 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 82.346 81.23 2 0.00090024 94400 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 116.3 70.937 431680000 31185000 290510000 5798600 1770500 5768000 7631300 5822200 4988700 6753600 8687300 11833000 13423000 4900700 9941700 22662000 8150 563 7457 68358;68359;68360;68361;68362;68363;68364;68365;68366;68367;68368;68369;68370;68371;68372;68373 54262;54263;54264;54265;54266;54267;54268;54269;54270;54271 54262 10 DLQGRDEQSEEK Unmodified 1432.643 0.64301522 1356 P35579 MYH9 Myosin-9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.878 8.0049 3 2.6244E-08 5782 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 103.88 77.898 6080100000 0 0 0 169810000 293750000 364490000 405710000 274560000 423330000 491940000 1165400000 943570000 577270000 462870000 507370000 8151 1356 7458 68374;68375;68376;68377;68378;68379;68380;68381;68382;68383;68384;68385 54272;54273;54274;54275;54276;54277;54278;54279;54280;54281;54282;54283;54284;54285;54286;54287;54288;54289;54290 54274 18 DLQGRDEQSEEKK Unmodified 1560.738 0.73797824 1356 P35579 MYH9 Myosin-9 yes yes 0 0 2 By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 6.4489 6.5587 3 0.028111 4618 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 39.016 24.836 16654000 0 0 0 1006900 1201200 486610 1482700 0 1101900 1766500 1732400 4538300 1196700 0 2141000 8152 1356 7459 68386;68387;68388;68389;68390;68391;68392;68393;68394;68395 54291 54291 1 DLQHPNEFIR Unmodified 1267.6309 0.63093439 1720 P53618 COPB1 Coatomer subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 1 2 2 1 2 2 2 51.759 51.881 2;3 0.0015449 58755 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 93.111 41.115 903790000 0 0 0 47368000 50611000 89608000 54402000 67089000 34017000 84528000 79778000 79315000 76318000 79166000 161590000 8153 1720 7460 68396;68397;68398;68399;68400;68401;68402;68403;68404;68405;68406;68407;68408;68409;68410;68411;68412;68413;68414;68415;68416;68417 54292;54293;54294;54295;54296;54297;54298;54299;54300;54301;54302;54303;54304;54305;54306;54307;54308;54309;54310;54311;54312 54305 19 DLQLLQGSK Unmodified 1000.5553 0.55530983 4669 Q9NVI1 FANCI Fanconi anemia group I protein yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 56.621 55.462 2 0.0017488 69606 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.5 31.662 313410000 5859500 122120000 0 11074000 11359000 16142000 13844000 16647000 8630600 18323000 15655000 24616000 14274000 16625000 18240000 8154 4669 7461 68418;68419;68420;68421;68422;68423;68424;68425;68426;68427;68428;68429;68430;68431;68432 54313;54314;54315;54316;54317;54318;54319;54320;54321;54322;54323;54324;54325;54326 54317 13 DLQNFLK Unmodified 876.47052 0.47051757 824 P06702 S100A9 Protein S100-A9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69.625 69.094 2 0.023406 78974 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 85.306 23.309 4118700000 183370 156730000 4079300 2096000000 159940000 163760000 173160000 217180000 0 189560000 302430000 177520000 206920000 151830000 119440000 8155 824 7462 68433;68434;68435;68436;68437;68438;68439;68440;68441;68442;68443;68444;68445;68446 54327;54328;54329;54330;54331;54332;54333;54334;54335;54336;54337;54338;54339;54340;54341;54342;54343;54344;54345;54346;54347 54328 21 DLQNVNITLR Unmodified 1184.6513 0.65133548 1343 P35232 PHB Prohibitin yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 68.211 68.249 2 0.024054 78317 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 45.161 20.342 14815000 0 0 0 0 1477700 1932100 1846400 2322100 1835800 3339600 0 0 0 2061600 0 8156 1343 7463 68447;68448;68449;68450;68451;68452;68453 54348;54349;54350 54349 3 DLQQQLVDAK Unmodified 1156.6088 0.60880197 1409 P40222 TXLNA Alpha-taxilin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 53.934 52.093 2 0.0018556 59799 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 106.68 51.907 371990000 6257800 295690000 0 12267000 10198000 16168000 15290000 7688800 8426000 0 0 0 0 0 0 8157 1409 7464 68454;68455;68456;68457;68458;68459;68460;68461;68462;68463 54351;54352;54353;54354;54355;54356;54357;54358;54359;54360 54359 10 DLQQSIAR Unmodified 929.49304 0.49304393 3549 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 31.18 31.483 2 0.0081134 33885 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 87.323 28.341 121180000 0 0 0 0 0 11661000 8332400 6790200 5555400 13999000 19163000 15745000 10225000 10367000 19343000 8158 3549 7465 68464;68465;68466;68467;68468;68469;68470;68471;68472;68473 54361;54362;54363;54364;54365 54363 5 DLQQSIAREPSAPSIPTPAYQSSPAGGHAPTPPTPAPR Unmodified 3846.9289 0.92891391 3549 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.32 76.378 4 3.1296E-41 88213 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 64.279 60.283 264850000 0 0 0 2354200 4901600 36363000 7611200 20183000 16198000 41921000 14831000 30382000 13390000 18654000 58064000 8159 3549 7466 68474;68475;68476;68477;68478;68479;68480;68481;68482;68483;68484;68485 54366;54367;54368;54369;54370;54371;54372;54373;54374;54375;54376 54367 11 DLQQSLVNSK Unmodified 1130.5932 0.5931519 4077 Q99996 AKAP9 A-kinase anchor protein 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 7 3.69 1 1 3 2 1 1 1 44.49 42.584 2 2.1246E-05 53955 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.82 81.125 50630000 0 25637000 0 0 0 0 0 6148800 0 0 0 0 11306000 7538300 0 8160 4077 7467 68486;68487;68488;68489;68490 54377;54378;54379 54378 3 DLQQYQSQAK Unmodified 1207.5833 0.5833155 492 O75396 SEC22B Vesicle-trafficking protein SEC22b yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 2 1 1 25.574 25.733 2 1.0909E-11 27407 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 162.97 115.37 65560000 0 0 0 0 8026100 0 13741000 0 8985000 11732000 0 0 0 9219900 13856000 8161 492 7468 68491;68492;68493;68494;68495;68496;68497;68498;68499;68500 54380;54381;54382;54383;54384;54385;54386;54387;54388;54389;54390;54391;54392 54382 13 DLQQYVSVVVLDEVGLAEDSPK Unmodified 2402.2217 0.22168626 2838 Q63HN8 RNF213 E3 ubiquitin-protein ligase RNF213 yes yes 0 0 0 By MS/MS By MS/MS 2.67 0.471 1 2 1 2 101.42 97.493 3 0.0016943 117225 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 42.904 35.006 11530000 2018800 9511400 0 0 0 0 0 0 0 0 0 0 0 0 0 8162 2838 7469 68501;68502;68503 54393;54394 54394 2 DLQSNVEHLTEK Unmodified 1411.6943 0.69432251 2064 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 56.047 56.173 2;3 7.7775E-20 63696 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 160.18 121.88 1828600000 0 0 0 100470000 117810000 150310000 117320000 182770000 86562000 157740000 173860000 176360000 157470000 159930000 248000000 8163 2064 7470 68504;68505;68506;68507;68508;68509;68510;68511;68512;68513;68514;68515;68516;68517;68518;68519;68520;68521;68522;68523;68524;68525;68526;68527 54395;54396;54397;54398;54399;54400;54401;54402;54403;54404;54405;54406;54407;54408;54409;54410;54411;54412;54413;54414;54415 54405 14 DLQSSQGGQQPR Unmodified 1299.6167 0.61674089 3112 Q7Z6J0 SH3RF1 E3 ubiquitin-protein ligase SH3RF1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.307 12.456 2 5.2188E-06 11420 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 131.44 120.61 65137000 0 0 0 3797500 3715200 4480200 5788200 4740200 4452400 5747700 6129000 7614200 6742000 4618400 7312500 8164 3112 7471 68528;68529;68530;68531;68532;68533;68534;68535;68536;68537;68538;68539 54416;54417;54418;54419;54420;54421;54422;54423;54424;54425;54426;54427 54422 10 DLQTRDEQNEEK Unmodified 1503.6801 0.68012901 1357 P35580 MYH10 Myosin-10 yes yes 0 0 1 By MS/MS 10 0 1 1 8.0119 8.3708 3 0.015727 6412 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 32.263 13.204 5827000 0 0 0 0 0 0 0 0 0 0 5827000 0 0 0 0 8165 1357 7472 68540 54428 54428 1 DLQVAPGTR Unmodified 955.50869 0.50869399 2807 Q5VST9 OBSCN Obscurin yes yes 0 0 0 By MS/MS 3 0 1 1 6.6275 3.2662 2 0.04479 4758 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 59.205 3.1946 3574000 0 3574000 0 0 0 0 0 0 0 0 0 0 0 0 0 8166 2807 7473 68541 54429 54429 1 DLRAPDVVIGADTIVTVGGLILEK Unmodified 2463.3948 0.39484002 678 O95671 ASMTL N-acetylserotonin O-methyltransferase-like protein yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 101.09 95.242 3 2.9096E-31 120365 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 111.97 109.17 11473000 11473000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8167 678 7474 68542;68543 54430;54431 54431 2 DLRAVEEAFVPVIK Unmodified 1584.8875 0.88754301 1644 P51003;Q9NRJ5 PAPOLA;PAPOLB Poly(A) polymerase alpha;Poly(A) polymerase beta yes no 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 95.659 90.262 3 1.264E-29 113602 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.71 94.455 54282000 13031000 41250000 0 0 0 0 0 0 0 0 0 0 0 0 0 8168 1644 7475 68544;68545;68546 54432;54433;54434 54432 3 DLREQPGTFDYQR Unmodified 1623.7641 0.76413341 3516 Q8TEH3 DENND1A DENN domain-containing protein 1A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 48.258 48.486 3 1.8093E-08 55105 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 107.53 96.742 138080000 0 0 0 0 12002000 22061000 14454000 12326000 17513000 0 17774000 13819000 0 11754000 16380000 8169 3516 7476 68547;68548;68549;68550;68551;68552;68553;68554;68555 54435;54436;54437;54438;54439;54440;54441;54442;54443;54444 54444 9 DLRHTENEEDK Unmodified 1384.6219 0.62188585 2230 Q13057 COASY Bifunctional coenzyme A synthase;Phosphopantetheine adenylyltransferase;Dephospho-CoA kinase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6.9738 6.4652 3 0.00021477 4231 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.417 65.482 597600000 54110000 19972000 333370000 10364000 6286600 13429000 10984000 8473400 12274000 22864000 25645000 21497000 15681000 13975000 28666000 8170 2230 7477 68556;68557;68558;68559;68560;68561;68562;68563;68564;68565;68566;68567;68568;68569;68570 54445;54446;54447;54448;54449;54450;54451;54452;54453 54448 7 DLRLTAGTGHK Unmodified 1167.636 0.63601977 2184 Q12769 NUP160 Nuclear pore complex protein Nup160 yes yes 0 0 1 By MS/MS By matching 2 0 2 1 1 29.067 24.654 3 0.040297 34652 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.516 24.886 34744000 31900000 0 2844500 0 0 0 0 0 0 0 0 0 0 0 0 8171 2184 7478 68571;68572 54454 54454 1 DLRNDEHTR Unmodified 1154.5428 0.54284767 1851 P61586 RHOA Transforming protein RhoA yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 6.5998 6.7756 3 0.0024199 4775 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 109.42 56.84 16295000 0 0 0 0 0 0 5551600 0 0 0 10743000 0 0 0 0 8172 1851 7479 68573;68574 54455;54456 54456 2 DLRNDEHTRR Unmodified 1310.644 0.64395869 1851 P61586 RHOA Transforming protein RhoA yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 5.9405 6.0579 3 0.0089197 3758 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 99.522 57.521 338660000 0 0 0 17799000 7629900 16460000 23412000 21958000 28161000 17277000 26650000 56088000 23020000 20256000 79945000 8173 1851 7480 68575;68576;68577;68578;68579;68580;68581;68582;68583;68584;68585;68586 54457;54458;54459;54460;54461;54462;54463;54464;54465;54466;54467 54461 10 DLRQDEHTRR Unmodified 1324.6596 0.65960876 858 P08134 RHOC Rho-related GTP-binding protein RhoC yes yes 0 0 2 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 6.2341 6.3317 3 0.019655 3549 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.937 70.938 167990000 0 0 0 9760300 5502900 13664000 16142000 0 19040000 9592900 0 31676000 17291000 15580000 29740000 8174 858 7481 68587;68588;68589;68590;68591;68592;68593;68594;68595;68596 54468;54469;54470;54471;54472;54473 54470 3 DLRSPLIATPTFVADK Unmodified 1742.9567 0.95668521 1559 P49116 NR2C2 Nuclear receptor subfamily 2 group C member 2 yes yes 0 0 1 By MS/MS 2 0 1 1 87.723 79.592 3 0.0072266 103681 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 28.869 19.633 7446900 7446900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8175 1559 7482 68597 54474 54474 1 DLRSPLTATPTFVTDSESTR Unmodified 2193.0913 0.091340788 976 P13056 NR2C1 Nuclear receptor subfamily 2 group C member 1 yes yes 0 0 1 By MS/MS By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 78.802 78.962 3 0.0006022 90879 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.054 34.648 30515000 0 0 0 0 0 0 0 0 4150600 5820000 4890700 0 4451800 0 11202000 8176 976 7483 68598;68599;68600;68601;68602 54475;54476 54475 2 DLRSTPNLSLDDVK Unmodified 1571.8155 0.81550028 2578 Q15788 NCOA1 Nuclear receptor coactivator 1 yes yes 0 0 1 By MS/MS 2 0 1 1 72.824 67.279 3 0.049669 85175 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 28.146 17.501 6818100 0 6818100 0 0 0 0 0 0 0 0 0 0 0 0 0 8177 2578 7484 68603 54477 54477 0 DLSAGAVSAVQCIANPIK Unmodified 1812.9404 0.94038322 3044 Q7L266 ASRGL1 Isoaspartyl peptidase/L-asparaginase;Isoaspartyl peptidase/L-asparaginase alpha chain;Isoaspartyl peptidase/L-asparaginase beta chain yes yes 0 0 0 By MS/MS 10 0 1 1 85.016 85.195 2 0.014593 98474 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.878 28.953 5520600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5520600 8178 3044 7485 68604 54478 54478 0 DLSASAHSK Unmodified 914.44576 0.44575938 3254 Q8IX04 UEVLD Ubiquitin-conjugating enzyme E2 variant 3 yes yes 0 0 0 By MS/MS By matching 2.33 0.471 2 1 2 1 7.097 4.1573 2 0.028967 6126 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.494 45.363 54201000 0 52629000 1571800 0 0 0 0 0 0 0 0 0 0 0 0 8179 3254 7486 68605;68606;68607 54479;54480 54479 2 DLSDFPLIK Unmodified 1046.5648 0.56481189 1106 P20585 MSH3 DNA mismatch repair protein Msh3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85.084 84.027 2 0.020558 104997 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.109 36.318 203510000 6298000 102020000 2782900 6385200 6949900 8195500 0 7504000 7264000 9639200 8728100 7012200 7777000 8902300 14053000 8180 1106 7487 68608;68609;68610;68611;68612;68613;68614;68615;68616;68617;68618;68619;68620;68621 54481;54482;54483;54484;54485 54483 5 DLSDRSNDIDLEGFDSVVSSTEK Unmodified 2527.1562 0.15618547 3754 Q96B97 SH3KBP1 SH3 domain-containing kinase-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 86.091 80.809 3 6.18E-46 102865 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 102.29 95.174 34478000 28503000 0 5974600 0 0 0 0 0 0 0 0 0 0 0 0 8181 3754 7488 68622;68623 54486;54487;54488;54489 54487 4 DLSDTVR Unmodified 804.39775 0.39774656 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 23.642 23.923 2 0.021589 24710 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 106.42 17.772 3087500000 0 0 0 0 0 0 165280000 240190000 149590000 561110000 779330000 1185100000 0 6816400 0 8182 4226 7489 68624;68625;68626;68627;68628;68629;68630 54490;54491;54492;54493 54493 2 DLSDTVRTVLK Unmodified 1245.6929 0.69286595 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.44 3.98 4 5 1 1 2 1 1 1 1 1 77.016 75.105 2;3 0.0032736 87049 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 60.434 38.675 140300000 27323000 52219000 14039000 0 0 0 0 4077200 10674000 9568800 8800500 13596000 0 0 0 8183 4226 7490 68631;68632;68633;68634;68635;68636;68637;68638;68639 54494;54495;54496;54497;54498;54499;54500;54501 54497 8 DLSELGSVR Unmodified 974.50327 0.50327426 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 53.406 53.239 2 0.0080109 60783 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 70.856 28.964 47118000 0 0 0 6470000 6799400 11426000 10430000 0 0 0 0 0 0 11993000 0 8184 2501 7491 68640;68641;68642;68643;68644;68645 54502;54503;54504;54505;54506;54507 54507 6 DLSEPYSIYTYR Unmodified 1505.7038 0.70382456 2448 Q147X3 NAA30 N-alpha-acetyltransferase 30 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 76.054 76.105 2 1.8074E-15 88074 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 157.66 150.97 212140000 0 0 0 4098800 8123200 8732800 1785000 3982100 1160400 50247000 50793000 77873000 0 0 5342700 8185 2448 7492 68646;68647;68648;68649;68650;68651;68652;68653;68654;68655 54508;54509;54510;54511;54512 54510 5 DLSEVSETTESTDVK Unmodified 1638.7472 0.74720552 1435 P41227 NAA10 N-alpha-acetyltransferase 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.77 2 1 23 3 1 2 2 2 2 2 4 2 2 1 1 2 52.007 52.274 2;3 5.7124E-59 54369 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 210.35 199.14 12615000000 143380000 0 0 56906000 127470000 113720000 670420000 757570000 650490000 1913500000 3022000000 5017900000 37644000 29244000 75165000 8186 1435 7493 68656;68657;68658;68659;68660;68661;68662;68663;68664;68665;68666;68667;68668;68669;68670;68671;68672;68673;68674;68675;68676;68677;68678;68679;68680;68681 54513;54514;54515;54516;54517;54518;54519;54520;54521;54522;54523;54524;54525;54526;54527;54528;54529;54530;54531;54532;54533;54534;54535;54536;54537;54538;54539;54540;54541;54542 54540 27 DLSFGHSR Unmodified 917.43553 0.43552905 2346 Q13835 PKP1 Plakophilin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 26.634 26.791 2 0.014414 28398 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 70.525 43.358 159680000 0 0 0 34093000 4666700 6126100 6132200 71512000 4067600 5448200 6280300 7597900 10366000 3393100 0 8187 2346 7494 68682;68683;68684;68685;68686;68687;68688;68689;68690;68691;68692 54543;54544;54545;54546 54544 4 DLSHIGDAVVISCAK Unmodified 1583.7977 0.79774172 959 P12004 PCNA Proliferating cell nuclear antigen yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 1 2 1 2 2 2 2 2 72.285 72.349 2;3 0.0001182 82464 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.009 55.447 485920000 0 0 0 23658000 13123000 14885000 15340000 33179000 16058000 14687000 93013000 58764000 22086000 47350000 133770000 8188 959 7495 68693;68694;68695;68696;68697;68698;68699;68700;68701;68702;68703;68704;68705;68706;68707;68708;68709;68710;68711;68712;68713;68714 54547;54548;54549;54550;54551;54552;54553;54554;54555;54556;54557;54558;54559;54560;54561 54550 15 DLSIGNPIPTVVSGAR Unmodified 1594.8679 0.8678702 621 O95104 SCAF4 Splicing factor, arginine/serine-rich 15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 84.305 84.37 2 1.3752E-27 98058 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 173.76 139.22 446770000 0 0 0 11085000 34286000 30080000 37335000 38021000 37836000 48987000 41904000 64006000 27155000 38894000 37181000 8189 621 7496 68715;68716;68717;68718;68719;68720;68721;68722;68723;68724;68725;68726 54562;54563;54564;54565;54566;54567;54568;54569;54570;54571;54572;54573;54574;54575;54576 54572 13 DLSIPLSIK Unmodified 984.58555 0.58554733 3624 Q92560 BAP1 Ubiquitin carboxyl-terminal hydrolase BAP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 83.185 82.536 2 0.0052332 95657 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 79.474 41.916 138530000 0 35245000 961110 3046500 4312000 6418000 4955100 6036900 5562600 8050600 7766800 9122000 15707000 13723000 17629000 8190 3624 7497 68727;68728;68729;68730;68731;68732;68733;68734;68735;68736;68737;68738;68739;68740;68741 54577;54578;54579;54580;54581;54582;54583;54584;54585;54586;54587;54588;54589 54578 13 DLSKPEVEYDCDAPSHNSEK Unmodified 2318.9961 0.99611977 261 O15164 TRIM24 Transcription intermediary factor 1-alpha yes yes 0 0 1 By matching By MS/MS By matching By matching 10 0 4 1 1 1 1 39.395 39.824 3 0.046497 44324 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 21.398 17.046 15956000 0 0 0 0 0 0 1993500 0 0 3197900 0 5271700 0 0 5492800 8191 261 7498 68742;68743;68744;68745 54590 54590 1 DLSLEEIQK Unmodified 1073.5605 0.56045479 1043;3705 P16949;Q93045 STMN1;STMN2 Stathmin;Stathmin-2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 5.73 4.01 1 6 1 7 3 3 2 1 1 1 1 1 1 1 63.683 60.807 2 0.00074227 76507 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.46 77.588 4898800000 330800000 3659600000 21223000 10989000 12430000 2096500 0 0 0 0 181440000 204880000 0 147090000 328300000 8192 1043;3705 7499 68746;68747;68748;68749;68750;68751;68752;68753;68754;68755;68756;68757;68758;68759;68760 54591;54592;54593;54594;54595;54596;54597;54598;54599;54600;54601;54602;54603;54604;54605;54606;54607 54591 16 DLSLENGAHAYNR Unmodified 1458.6852 0.68515481 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 43.089 43.211 3 4.3526E-08 48349 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 99.5 80.106 199820000 0 0 0 11254000 14368000 15460000 13208000 16358000 13980000 23555000 23941000 0 18742000 11806000 37144000 8193 1201 7500 68761;68762;68763;68764;68765;68766;68767;68768;68769;68770;68771 54608;54609;54610;54611;54612;54613;54614;54615;54616;54617;54618 54613 10 DLSLGGVLLFPVDDK Unmodified 1586.8556 0.85557418 3184 Q86WJ1 CHD1L Chromodomain-helicase-DNA-binding protein 1-like yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 99.504 91.374 2 1.5277E-31 117790 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 133.05 122.3 8520700 8520700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8194 3184 7501 68772;68773 54619;54620 54620 2 DLSLGLDDSR Unmodified 1089.5302 0.53021729 2360 Q14004 CDK13 Cyclin-dependent kinase 13 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 63.457 63.483 2 0.034153 72697 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 41.876 20.576 12700000 0 0 0 0 2660400 0 2787700 1978700 2387700 0 0 0 2885600 0 0 8195 2360 7502 68774;68775;68776;68777;68778 54621;54622 54621 2 DLSLLQIQMR Oxidation (M) 1231.6595 0.65945733 4226;2895 Q6N069;Q9BXJ9 NAA16;NAA15 N-alpha-acetyltransferase 16, NatA auxiliary subunit;N-alpha-acetyltransferase 15, NatA auxiliary subunit no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 2 1 3 2 79.181 79.354 2 6.5873E-32 91311 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 178.83 69.721 3139100000 0 0 0 0 0 0 168340000 194920000 210360000 615980000 738690000 1210900000 0 0 0 8196 2895;4226 7503 68779;68780;68781;68782;68783;68784;68785;68786;68787;68788 54623;54624;54625;54626;54627;54628;54629;54630;54631;54632;54633;54634;54635;54636;54637;54638 54637 4527 16 DLSLLQIQMR Unmodified 1215.6645 0.66454271 4226;2895 Q6N069;Q9BXJ9 NAA16;NAA15 N-alpha-acetyltransferase 16, NatA auxiliary subunit;N-alpha-acetyltransferase 15, NatA auxiliary subunit no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 86.156 86.323 2 3.6228E-17 99823 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 170.66 128.07 681760000 0 0 0 0 0 0 24750000 61215000 47485000 142460000 149750000 248080000 0 0 8012800 8197 2895;4226 7503 68789;68790;68791;68792;68793;68794;68795 54639;54640;54641;54642;54643;54644;54645;54646;54647 54640 9 DLSLPPVDR Unmodified 1010.5397 0.53965977 1771 P55786 NPEPPS Puromycin-sensitive aminopeptidase yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 64.786 64.912 2 0.010997 74843 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 63.48 40.46 19224000 0 0 0 3641500 0 0 0 0 0 0 0 2891700 0 3062700 9628500 8198 1771 7504 68796;68797;68798;68799 54648;54649;54650;54651;54652 54651 5 DLSLVPER Unmodified 927.50255 0.50254598 2583 Q15814 TBCC Tubulin-specific chaperone C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 58.963 59.128 2 0.011381 67063 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 77.058 47.909 42400000 0 0 0 5826600 0 5586800 3928300 1427000 0 0 9372800 5677500 0 0 10581000 8199 2583 7505 68800;68801;68802;68803;68804;68805;68806 54653;54654;54655 54654 3 DLSMIVLLPNEIDGLQK Oxidation (M) 1913.018 0.017964835 1251;1545 P29508;P48594 SERPINB3;SERPINB4 Serpin B3;Serpin B4 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 2 2 1 1 95.378 95.391 2 5.0912E-05 110774 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 74.76 61.081 19486000 0 0 0 8974000 0 0 0 0 0 8071900 1422700 0 0 0 1017800 8200 1251;1545 7506 68807;68808;68809;68810;68811;68812 54656;54657;54658;54659;54660 54656 1846 5 DLSMIVLLPNEIDGLQK Unmodified 1897.0231 0.023050213 1251;1545 P29508;P48594 SERPINB3;SERPINB4 Serpin B3;Serpin B4 no no 0 0 0 By MS/MS 10 0 1 1 97.885 97.674 2 9.506E-15 113268 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 121.08 105.19 2820000 0 0 0 2820000 0 0 0 0 0 0 0 0 0 0 0 8201 1251;1545 7506 68813 54661 54661 1 DLSMSEEDQMMR 2 Oxidation (M) 1502.5687 0.56872935 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 2 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 32.488 32.665 2 0.00029742 35902 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 72.643 68.031 29277000 0 0 0 1436800 1703700 4105700 2742200 0 1709800 2864700 3083400 4021800 3816400 0 3792300 8202 3119 7507 68814;68815;68816;68817;68818;68819;68820;68821;68822;68823 54662;54663;54664;54665;54666;54667;54668 54662 4724;4725;4726 7 DLSMSEEDQMMR Oxidation (M) 1486.5738 0.57381472 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 1 0 By MS/MS By MS/MS 10 0 4 2 2 45.887 46.285 2 1.4037E-05 51311 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 103.7 100.72 21279000 0 0 0 0 0 8928400 0 0 0 0 0 0 0 0 12350000 8203 3119 7507 68824;68825;68826;68827 54669;54670 54670 4724;4725;4726 2 DLSMSEEDQMMR Unmodified 1470.5789 0.5789001 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 59.709 59.89 2 2.6554E-05 67364 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 110.14 103.75 37411000 0 0 0 0 1817900 4469100 2284800 0 0 4711100 4333200 4814800 0 3478300 11501000 8204 3119 7507 68828;68829;68830;68831;68832;68833;68834;68835 54671;54672;54673;54674;54675;54676 54675 6 DLSPDDPQVQK Unmodified 1240.5935 0.59354583 2586 Q15828 CST6 Cystatin-M yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 33.202 33.402 2 0.0014517 36203 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.985 51.245 64880000 0 0 0 18531000 0 4972600 4422600 10657000 0 4885600 7725100 6683100 3472400 3530200 0 8205 2586 7508 68836;68837;68838;68839;68840;68841;68842;68843;68844;68845 54677;54678;54679;54680;54681;54682;54683;54684;54685 54683 9 DLSPTLIDNSAAK Unmodified 1343.6933 0.69325988 4812 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 62.619 62.747 2 0.0037395 72266 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 64.439 36.426 49708000 0 0 0 0 5887800 4770000 4444400 0 0 5387500 6858900 0 5996300 6747700 9615600 8206 4812 7509 68846;68847;68848;68849;68850;68851;68852;68853 54686;54687;54688;54689 54689 2 DLSQESSSTAPGSEVTIK Unmodified 1834.8796 0.87961668 2551 Q15596 NCOA2 Nuclear receptor coactivator 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 51.158 51.326 2 2.7546E-37 58063 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 126.1 107.52 108700000 0 0 0 0 6399000 9464200 7234100 6678800 7615500 14206000 15338000 26898000 14872000 0 0 8207 2551 7510 68854;68855;68856;68857;68858;68859;68860;68861;68862;68863 54690;54691;54692;54693;54694;54695;54696;54697;54698;54699 54690 10 DLSQILVNIK Unmodified 1141.6707 0.67067394 4364 Q9H2F5 EPC1 Enhancer of polycomb homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 88.611 88.734 2 0.0024782 102691 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.206 63.42 18095000 0 0 0 0 0 2398300 0 0 0 4602700 2924700 0 0 2788800 5380900 8208 4364 7511 68864;68865;68866;68867;68868 54700;54701;54702;54703;54704 54702 5 DLSQLQENLK Unmodified 1186.6194 0.61936665 3255 Q8IX12 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 62.516 61.841 2 9.3877E-06 71320 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 147.29 124.51 1617300000 0 528900000 0 57295000 68994000 68525000 84925000 70806000 77992000 95758000 114280000 98498000 115970000 74535000 160850000 8209 3255 7512 68869;68870;68871;68872;68873;68874;68875;68876;68877;68878;68879;68880;68881;68882 54705;54706;54707;54708;54709;54710;54711;54712;54713;54714;54715;54716;54717;54718;54719;54720;54721 54721 17 DLSQNFPTK Unmodified 1048.5189 0.51892433 4751 Q9NYU2 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 8.43 3.02 1 2 11 1 2 1 1 1 1 1 1 1 1 1 1 1 43.964 42.982 2 0.00050548 53470 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.61 89.789 363380000 610850 211130000 0 9711700 6603200 14462000 9556900 8504500 0 13810000 14659000 24496000 12572000 11622000 25648000 8210 4751 7513 68883;68884;68885;68886;68887;68888;68889;68890;68891;68892;68893;68894;68895;68896 54722;54723;54724;54725;54726;54727;54728 54725 7 DLSQQIR Unmodified 858.45593 0.45593014 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.598 28.793 2 0.024701 30979 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 82.263 15.228 405620000 0 0 0 26598000 29746000 39934000 39036000 24890000 23077000 49232000 51291000 32629000 26727000 39195000 23262000 8211 965 7514 68897;68898;68899;68900;68901;68902;68903;68904;68905;68906;68907;68908 54729;54730;54731;54732;54733;54734 54729 6 DLSRFDASFFGVHPK Unmodified 1721.8526 0.85255449 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS 8.25 3.03 1 3 1 1 1 1 81.662 80.934 3 1.9227E-20 92880 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.23 92.997 24448000 0 1304200 0 0 0 3533100 0 0 0 0 0 0 809510 0 18801000 8212 1565 7515 68909;68910;68911;68912 54735;54736;54737 54736 3 DLSSEDTRGRK Unmodified 1262.6215 0.62149192 1080 P18846 ATF1 Cyclic AMP-dependent transcription factor ATF-1 yes yes 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 7.4887 4.6224 3 0.024155 7922 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.056 66.056 137880000 54459000 0 83423000 0 0 0 0 0 0 0 0 0 0 0 0 8213 1080 7516 68913;68914 54738 54738 0 DLSSEELAAFQK Unmodified 1336.6511 0.65106071 5152 Q9Y3B7 MRPL11 39S ribosomal protein L11, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 76.639 71.801 2 0.0025332 89721 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.489 51.408 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8214 5152 7517 68915 54739 54739 1 DLSSQLLK Unmodified 902.5073 0.50729701 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.556 59.665 2 0.02755 67830 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 57.281 9.4324 245470000 0 0 0 16535000 15807000 20828000 17174000 19673000 12789000 21336000 20823000 25836000 18847000 24512000 31313000 8215 2392 7518 68916;68917;68918;68919;68920;68921;68922;68923;68924;68925;68926;68927 54740;54741 54741 2 DLSSVQTLLTK Unmodified 1203.6711 0.67106787 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 80.004 80.077 2 0.020099 91640 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 52.579 20.644 38300000 0 0 0 0 2577200 0 4709500 0 0 0 8175000 10556000 4868500 7413900 0 8216 2344 7519 68928;68929;68930;68931;68932;68933 54742;54743 54742 2 DLSTIEPLK Unmodified 1014.5597 0.55972651 1404 P39687;O43423;O95626 ANP32A;ANP32C;ANP32D Acidic leucine-rich nuclear phosphoprotein 32 family member A;Acidic leucine-rich nuclear phosphoprotein 32 family member C;Acidic leucine-rich nuclear phosphoprotein 32 family member D yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 65.33 63.764 2 0.0051115 73266 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.265 0 6919500000 225940000 4562100000 33786000 94718000 102260000 91955000 122850000 119980000 101680000 151580000 278240000 241150000 175470000 199570000 418210000 8217 1404 7520 68934;68935;68936;68937;68938;68939;68940;68941;68942;68943;68944;68945;68946;68947;68948;68949;68950 54744;54745;54746;54747;54748;54749;54750;54751;54752;54753;54754;54755;54756;54757;54758;54759;54760;54761;54762;54763;54764;54765;54766;54767;54768;54769;54770;54771;54772 54760 27 DLSTPAQYALMEK Unmodified 1465.7123 0.71228076 4265 Q9BZG1 RAB34 Ras-related protein Rab-34 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 75.571 75.261 2 6.9843E-08 86407 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 99.215 53.214 317600000 0 136650000 0 6961800 8880200 10471000 12371000 17052000 8082900 16745000 25072000 19631000 12284000 15291000 28112000 8218 4265 7521 68951;68952;68953;68954;68955;68956;68957;68958;68959;68960;68961;68962;68963 54773;54774;54775;54776;54777;54778;54779;54780;54781;54782;54783;54784;54785 54777 13 DLSTPAQYALMEK Oxidation (M) 1481.7072 0.70719538 4265 Q9BZG1 RAB34 Ras-related protein Rab-34 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 68.661 67.916 2 2.1062E-05 78282 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 89.548 63.889 213390000 0 33361000 0 9059100 12351000 10788000 18028000 13145000 13390000 22088000 0 27205000 19414000 14828000 19728000 8219 4265 7521 68964;68965;68966;68967;68968;68969;68970;68971;68972;68973;68974;68975;68976 54786;54787;54788;54789;54790;54791;54792;54793;54794;54795;54796;54797 54791 5724 12 DLSTVEALQNLK Unmodified 1329.714 0.71399532 4149 Q9BTT0 ANP32E Acidic leucine-rich nuclear phosphoprotein 32 family member E yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.03 3.35 5 3 23 2 4 2 2 2 2 2 1 2 2 2 2 2 2 2 80.146 79.123 2;3 1.0707E-09 96793 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 153.24 114.95 8148800000 121590000 6077900000 83803000 73685000 104930000 87323000 96216000 106960000 83272000 158860000 244430000 222870000 161590000 179370000 346010000 8220 4149 7522 68977;68978;68979;68980;68981;68982;68983;68984;68985;68986;68987;68988;68989;68990;68991;68992;68993;68994;68995;68996;68997;68998;68999;69000;69001;69002;69003;69004;69005;69006;69007 54798;54799;54800;54801;54802;54803;54804;54805;54806;54807;54808;54809;54810;54811;54812;54813;54814;54815;54816;54817;54818;54819;54820;54821;54822 54802 22 DLSYCLSGMYDHR Unmodified 1615.6759 0.67591203 1692 P52597 HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes yes 0 0 0 By MS/MS 10 0 1 1 70.708 71.143 3 0.0018505 81117 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.115 42.876 18831000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18831000 8221 1692 7523 69008 54823 54823 1 DLTDAAIGPAYR Unmodified 1261.6303 0.63026569 5173 Q9Y3R4 NEU2 Sialidase-2 yes yes 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 62.808 62.618 2 7.5536E-05 72192 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 89.247 60.849 15350000 0 0 0 11074000 0 1860400 0 0 0 2416000 0 0 0 0 0 8222 5173 7524 69009;69010;69011 54824 54824 1 DLTDEEK Unmodified 848.37634 0.37634241 3714 Q969G3 SMARCE1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 11.888 12.065 2 0.035265 11188 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 70.912 8.1982 29512000 0 0 0 0 2393800 3745500 3899000 0 2401100 2850300 2582400 2463600 2887900 2792900 3495300 8223 3714 7525 69012;69013;69014;69015;69016;69017;69018;69019;69020;69021 54825;54826;54827 54825 3 DLTDGHFENILADNSVNDQTK Unmodified 2345.0771 0.077147287 1383 P36952 SERPINB5 Serpin B5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.16 3.73 5 2 12 4 2 1 1 1 1 1 1 1 1 1 1 1 1 1 80.003 78.006 3 6.4512E-100 93578 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 171.33 163.05 2334100000 193090000 1639100000 40723000 6627200 9813400 68523000 16485000 28357000 27815000 48737000 39441000 32940000 23132000 32679000 126640000 8224 1383 7526 69022;69023;69024;69025;69026;69027;69028;69029;69030;69031;69032;69033;69034;69035;69036;69037;69038;69039;69040 54828;54829;54830;54831;54832;54833;54834;54835;54836;54837;54838;54839;54840;54841;54842;54843;54844;54845;54846;54847;54848 54837 21 DLTDYLMK Oxidation (M) 1013.4739 0.47394797 1951;1815;1958;2711 P60709;P63261;P68032;P63267;P68133;P62736;Q562R1 ACTB;ACTG1;ACTC1;ACTG2;ACTA1;ACTA2;ACTBL2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, aortic smooth muscle;Beta-actin-like protein 2 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 74 5 6 5 6 8 5 6 5 5 7 8 8 69.919 70.013 1;2 0.0014203 74335 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 119.29 107.88 13244000000 0 0 0 690480000 1037900000 999160000 853760000 913550000 612430000 1126000000 1327100000 1714300000 1299100000 1089000000 1580800000 8225 1815;1951;1958;2711 7527 69041;69042;69043;69044;69045;69046;69047;69048;69049;69050;69051;69052;69053;69054;69055;69056;69057;69058;69059;69060;69061;69062;69063;69064;69065;69066;69067;69068;69069;69070;69071;69072;69073;69074;69075;69076;69077;69078;69079;69080;69081;69082;69083;69084;69085;69086;69087;69088;69089;69090;69091;69092;69093;69094;69095;69096;69097;69098;69099;69100;69101;69102;69103;69104;69105;69106;69107;69108;69109;69110;69111;69112;69113;69114 54849;54850;54851;54852;54853;54854;54855;54856;54857;54858;54859;54860;54861;54862;54863;54864;54865;54866;54867;54868;54869;54870;54871;54872;54873;54874;54875;54876;54877;54878;54879;54880;54881;54882;54883;54884;54885;54886;54887;54888;54889;54890;54891;54892;54893;54894;54895;54896;54897;54898;54899;54900;54901;54902;54903;54904;54905;54906;54907;54908;54909;54910;54911;54912;54913;54914;54915;54916;54917;54918;54919;54920;54921;54922;54923;54924;54925;54926;54927;54928;54929;54930;54931;54932 54877 2939 77 DLTDYLMK Unmodified 997.47903 0.47903335 1951;1815;1958;2711 P60709;P63261;P68032;P63267;P68133;P62736;Q562R1 ACTB;ACTG1;ACTC1;ACTG2;ACTA1;ACTA2;ACTBL2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, aortic smooth muscle;Beta-actin-like protein 2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.481 77.539 2 0.0069006 88772 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.626 53.981 13627000000 0 0 0 494740000 845510000 991130000 605040000 1032400000 438370000 1113300000 1379400000 1538800000 875960000 1276200000 3035800000 8226 1815;1951;1958;2711 7527 69115;69116;69117;69118;69119;69120;69121;69122;69123;69124;69125;69126 54933;54934;54935;54936;54937;54938;54939;54940;54941;54942;54943;54944;54945;54946;54947;54948;54949;54950;54951;54952;54953;54954;54955;54956;54957;54958 54939 26 DLTEALDEDADPTK Unmodified 1531.689 0.68896236 4605 Q9NRL2 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A yes yes 0 0 0 By MS/MS 10 0 1 1 65.615 64.927 2 0.010564 75143 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 54.259 34.601 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8227 4605 7528 69127 54959 54959 1 DLTEIQCDMSDVNLK Unmodified 1779.8019 0.8019004 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS 2 0 1 1 83.168 78.448 2 4.9633E-05 97507 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.08 119.57 42826000 0 42826000 0 0 0 0 0 0 0 0 0 0 0 0 0 8228 5049 7529 69128 54960 54960 1 DLTERGLWHEEMK Oxidation (M) 1658.7723 0.77225526 1171 P23921 RRM1 Ribonucleoside-diphosphate reductase large subunit yes yes 0 1 1 By MS/MS 2 0 1 1 57.661 49.48 3 0.016478 67364 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 44.132 35.495 45195000 45195000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8229 1171 7530 69129 54961 54961 1690 1 DLTERGLWHEEMK Unmodified 1642.7773 0.77734063 1171 P23921 RRM1 Ribonucleoside-diphosphate reductase large subunit yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 66.163 60.136 3 0.023754 80077 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.88 28.254 51284000 48260000 0 3024100 0 0 0 0 0 0 0 0 0 0 0 0 8230 1171 7530 69130;69131 54962 54962 1 DLTEVSTLK Unmodified 1004.539 0.53899107 3429 Q8NEU8 APPL2 DCC-interacting protein 13-beta yes yes 0 0 0 By MS/MS 2 0 1 1 54.756 48.95 2 0.0078231 63215 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.853 16.641 36406000 0 36406000 0 0 0 0 0 0 0 0 0 0 0 0 0 8231 3429 7531 69132 54963;54964 54963 2 DLTEYLK Unmodified 880.4542 0.45419881 2647;4633 Q29RF7;Q9NTI5 PDS5A;PDS5B Sister chromatid cohesion protein PDS5 homolog A;Sister chromatid cohesion protein PDS5 homolog B no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.728 67.81 2 0.026085 77507 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 79.454 19.813 205120000 0 0 0 9754300 10777000 16254000 17037000 15959000 11463000 22441000 23433000 23704000 15576000 14907000 23813000 8232 2647;4633 7532 69133;69134;69135;69136;69137;69138;69139;69140;69141;69142;69143;69144 54965;54966;54967;54968 54965 4 DLTEYLSR Unmodified 995.49238 0.49237523 236 O14979 HNRNPDL Heterogeneous nuclear ribonucleoprotein D-like yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 67.232 67.375 2 0.030437 77020 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 55.531 25.345 13756000 0 0 0 0 0 0 13756000 0 0 0 0 0 0 0 0 8233 236 7533 69145;69146 54969;54970 54969 2 DLTGELEYATK Unmodified 1238.603 0.60304789 4298 Q9GZP4 PITHD1 PITH domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 69.132 69.165 2 0.0038424 78733 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.006 25.114 24680000 0 0 0 4249600 1987200 0 2447900 0 0 0 3081800 4832800 0 0 8080500 8234 4298 7534 69147;69148;69149;69150;69151;69152 54971;54972 54971 2 DLTIGQMQGK Oxidation (M) 1105.5438 0.54375887 5221 Q9Y570 PPME1 Protein phosphatase methylesterase 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 31.404 30.145 2 0.0038429 37537 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.698 54.08 131370000 0 106240000 0 0 0 0 0 0 0 8471400 0 16659000 0 0 0 8235 5221 7535 69153;69154;69155;69156;69157;69158;69159;69160;69161;69162 54973;54974;54975;54976;54977;54978;54979;54980;54981;54982;54983 54975 6626 11 DLTIGQMQGK Unmodified 1089.5488 0.54884425 5221 Q9Y570 PPME1 Protein phosphatase methylesterase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 3 1 1 1 1 1 1 1 1 1 1 48.821 48.236 2 0.00029946 59834 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.81 94.51 90957000 0 2699900 0 0 0 12092000 0 0 0 0 23108000 23176000 0 0 29881000 8236 5221 7535 69163;69164;69165;69166;69167;69168;69169;69170;69171;69172;69173;69174;69175;69176 54984;54985;54986;54987;54988;54989;54990;54991;54992;54993;54994;54995;54996 54986 13 DLTIPESSTVK Unmodified 1188.6238 0.62378333 2680 Q49A26 GLYR1 Putative oxidoreductase GLYR1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.623 55.749 2 0.001288 63025 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 75.378 51.223 44792000 0 0 0 2675200 2903300 3772500 3729000 3665200 2761100 4645000 4711500 4411000 3983600 2881900 4653000 8237 2680 7536 69177;69178;69179;69180;69181;69182;69183;69184;69185;69186;69187;69188 54997;54998;54999;55000;55001;55002;55003;55004;55005 55000 9 DLTLDQAYSYAVENAK Unmodified 1799.8578 0.85775902 1155 P23381 WARS Tryptophan--tRNA ligase, cytoplasmic;T1-TrpRS;T2-TrpRS yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.23 3.79 6 2 5 1 6 1 1 1 1 1 1 86.413 83.6 2;3 1.8518E-131 103072 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 280.21 181.96 1580000000 15612000 1518700000 3822500 0 0 0 0 0 0 9440600 5852400 0 0 3383300 23214000 8238 1155 7537 69189;69190;69191;69192;69193;69194;69195;69196;69197;69198;69199;69200;69201 55006;55007;55008;55009;55010;55011;55012;55013;55014;55015;55016;55017 55007 11 DLTLEENQVK Unmodified 1187.6034 0.60338224 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 46.581 47.324 2 0.0065864 52195 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 114.89 46.997 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8239 2431 7538 69202;69203 55018;55019 55018 2 DLTLFGR Unmodified 820.4443 0.44430282 4466 Q9H999 PANK3 Pantothenate kinase 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 72.648 72.594 2 0.023371 84283 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 88.734 44.123 117040000 0 0 0 15795000 21005000 21292000 0 0 0 14065000 17413000 27473000 0 0 0 8240 4466 7539 69204;69205;69206;69207;69208;69209 55020;55021;55022;55023;55024 55023 5 DLTNVQNLQK Unmodified 1171.6197 0.619701 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.53 2.94 1 2 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 44.594 43.677 2 2.9547E-08 54042 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 153.78 98.248 527700000 572610 243710000 0 18238000 11720000 23498000 18124000 14261000 17921000 21337000 35308000 23703000 22013000 32657000 44629000 8241 2344 7540 69210;69211;69212;69213;69214;69215;69216;69217;69218;69219;69220;69221;69222;69223;69224 55025;55026;55027;55028;55029;55030;55031;55032;55033;55034;55035;55036;55037 55028 12 DLTPAVTDNDEADKK Unmodified 1630.7686 0.76860967 1799 P57772 EEFSEC Selenocysteine-specific elongation factor yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 36.728 31.423 3 1.3769E-56 41263 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 137.93 125.06 85842000 16214000 69627000 0 0 0 0 0 0 0 0 0 0 0 0 0 8242 1799 7541 69225;69226;69227 55038;55039;55040;55041;55042;55043 55040 6 DLTPEHLPLLR Unmodified 1302.7296 0.7295858 3773 Q96C86 DCPS m7GpppX diphosphatase yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 78.214 78.345 3 0.018749 89930 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 31.185 19.866 15510000 0 0 0 0 0 4802400 0 0 0 0 0 0 0 0 10708000 8243 3773 7542 69228;69229 55044 55044 1 DLTQMADELR Oxidation (M) 1206.5551 0.55505184 1435 P41227 NAA10 N-alpha-acetyltransferase 10 yes yes 0 1 0 By MS/MS 10 0 2 2 48.802 49.537 2 0.014739 55382 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 62.558 27.201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8244 1435 7543 69230;69231 55045;55046 55045 2251 2 DLTQMADELRR Oxidation (M) 1362.6562 0.65616287 1435 P41227 NAA10 N-alpha-acetyltransferase 10 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 1 2 2 3 3 3 3 44.696 44.913 2;3 0.00022375 49093 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.332 52.863 1550300000 0 0 0 4854500 8786000 0 64837000 51145000 107830000 193430000 349720000 769710000 0 0 0 8245 1435 7544 69232;69233;69234;69235;69236;69237;69238;69239;69240;69241;69242;69243;69244;69245;69246;69247;69248;69249 55047;55048;55049;55050;55051;55052;55053;55054;55055;55056 55055 2251 8 DLTQMADELRR Unmodified 1346.6612 0.66124824 1435 P41227 NAA10 N-alpha-acetyltransferase 10 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 2 2 2 2 2 2 70.276 70.484 2;3 8.3911E-16 81065 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 160.36 120.01 331400000 0 0 0 0 0 0 13751000 17546000 19605000 44734000 69204000 166560000 0 0 0 8246 1435 7544 69250;69251;69252;69253;69254;69255;69256;69257;69258;69259;69260;69261 55057;55058;55059;55060;55061;55062;55063;55064;55065 55065 6 DLTQTASSTAR Unmodified 1149.5626 0.56258006 4773 Q9NZM1 MYOF Myoferlin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 23.355 23.513 2 0.00915 25122 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 78.939 44.936 22885000 0 0 0 3716300 0 3874700 3456700 0 2540100 0 0 0 0 5280200 4016600 8247 4773 7545 69262;69263;69264;69265;69266;69267 55066;55067;55068 55067 1 DLTSVMR Unmodified 820.41129 0.41128813 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 46.949 47.212 2 0.029815 52843 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 75.311 40.606 62504000 0 0 0 0 3940800 0 5060900 4287800 0 6373600 8785000 7843000 4810100 6550000 14853000 8248 2047 7546 69268;69269;69270;69271;69272;69273;69274;69275;69276 55069;55070;55071;55072 55071 4 DLTSVNILLK Unmodified 1114.6598 0.6597749 2047;241 Q01082;O15020 SPTBN1;SPTBN2 Spectrin beta chain, non-erythrocytic 1;Spectrin beta chain, non-erythrocytic 2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.83 3.5 4 1 13 2 2 1 2 1 1 1 1 1 1 1 1 1 1 1 84.5 83.409 2 5.2805E-06 103309 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.56 62.313 369150000 25383000 188320000 10747000 0 6942600 13652000 7857500 5808300 11892000 18310000 18915000 16392000 7036000 12376000 25512000 8249 2047;241 7547 69277;69278;69279;69280;69281;69282;69283;69284;69285;69286;69287;69288;69289;69290;69291;69292;69293;69294 55073;55074;55075;55076;55077;55078;55079;55080;55081;55082;55083;55084;55085;55086;55087;55088 55076 16 DLTSYAINPER Unmodified 1277.6252 0.62518031 2777 Q5T5X7 BEND3 BEN domain-containing protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 62.982 63.044 2 0.0036946 71536 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.283 36.769 13747000 0 0 0 0 3518000 0 3330800 0 0 0 0 0 0 0 6898700 8250 2777 7548 69295;69296;69297;69298 55089;55090;55091;55092 55090 3 DLTTAGAVTQCYR Unmodified 1454.6824 0.68237762 2078 Q02543 RPL18A 60S ribosomal protein L18a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 52.114 52.265 2 0.006411 59181 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 47.361 33.984 97937000 0 0 0 4767100 4428600 0 5000900 0 0 7062700 12854000 21501000 14440000 11404000 16479000 8251 2078 7549 69299;69300;69301;69302;69303;69304;69305;69306;69307;69308 55093;55094;55095;55096;55097;55098 55096 6 DLTTFLESQK Unmodified 1180.5976 0.59756858 4369 Q9H2K8 TAOK3 Serine/threonine-protein kinase TAO3 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 82.551 78.554 2 0.0053397 97354 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.033 66.959 32690000 0 32690000 0 0 0 0 0 0 0 0 0 0 0 0 0 8252 4369 7550 69309;69310 55099 55099 1 DLTVCEPPK Unmodified 1057.5114 0.51139611 3415 Q8ND56 LSM14A Protein LSM14 homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 38.935 39.101 2 0.0078297 43667 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 71.379 0 97708000 0 0 0 7111200 5446200 7998300 9399500 5651200 5361700 10435000 11386000 8656100 0 9141200 17122000 8253 3415 7551 69311;69312;69313;69314;69315;69316;69317;69318;69319;69320;69321 55100;55101;55102;55103;55104;55105;55106;55107;55108;55109 55109 10 DLVAIEAK Unmodified 857.48583 0.48583328 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 48.944 49.044 2 0.035078 54233 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.716 28.513 146060000 0 0 0 7232300 5992600 16642000 12045000 7766100 0 22727000 20376000 0 10471000 13155000 29656000 8254 2047 7552 69322;69323;69324;69325;69326;69327;69328;69329;69330;69331 55110 55110 1 DLVAQAPLK Unmodified 953.55458 0.55458155 583 O94776 MTA2 Metastasis-associated protein MTA2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 51.729 51.96 2 0.0054331 57697 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 77.741 51.139 105110000 0 0 0 0 0 44290000 0 0 17341000 0 13698000 0 14537000 15245000 0 8255 583 7553 69332;69333;69334;69335;69336;69337;69338 55111;55112;55113;55114;55115;55116;55117 55116 7 DLVAQAPLKPK Unmodified 1178.7023 0.70230842 583 O94776 MTA2 Metastasis-associated protein MTA2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 2 2 2 2 1 2 2 1 2 1 47.398 47.526 2;3 0.016038 52919 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 56.359 49.471 796260000 0 0 0 56170000 50033000 60201000 63223000 58411000 41929000 51492000 100440000 121610000 55909000 73303000 63545000 8256 583 7554 69339;69340;69341;69342;69343;69344;69345;69346;69347;69348;69349;69350;69351;69352;69353;69354;69355;69356;69357;69358;69359 55118;55119;55120;55121;55122;55123 55122 0 DLVAQWK Unmodified 858.45995 0.45995289 2397 Q14241 TCEB3 Transcription elongation factor B polypeptide 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 55.064 55.227 2 0.046463 62377 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 65.897 32.968 68154000 0 0 0 0 3077300 5410000 4548700 3698100 4766000 6599800 10668000 0 9611600 5980900 13794000 8257 2397 7555 69360;69361;69362;69363;69364;69365;69366;69367;69368;69369 55124 55124 1 DLVASVPDMQGDGEDNHMDGDK Unmodified 2343.9584 0.95835406 2455 Q14919 DRAP1 Dr1-associated corepressor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.91 3.42 2 1 8 1 2 1 1 1 1 1 1 1 1 66.141 64.528 3 3.1113E-13 73884 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.145 71.456 134600000 8707100 78305000 0 3704600 0 5650500 2945800 0 0 4664300 6700600 5746200 0 6395000 11780000 8258 2455 7556 69370;69371;69372;69373;69374;69375;69376;69377;69378;69379;69380 55125;55126;55127;55128;55129;55130;55131;55132;55133;55134;55135;55136 55130 10 DLVASVPDMQGDGEDNHMDGDK 2 Oxidation (M) 2375.9482 0.9481833 2455 Q14919 DRAP1 Dr1-associated corepressor yes yes 0 2 0 By MS/MS By MS/MS 6 4 1 1 1 1 48.153 42.59 3 0.0005938 55347 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 47.392 46.703 15965000 0 15965000 0 0 0 0 0 0 0 0 0 0 0 0 0 8259 2455 7556 69381;69382 55137;55138 55138 4036;4037 2 DLVASVPDMQGDGEDNHMDGDK Oxidation (M) 2359.9533 0.95326868 2455 Q14919 DRAP1 Dr1-associated corepressor yes yes 0 1 0 By MS/MS By MS/MS 2 0 3 1 2 61.451 54.784 3 2.7402E-07 74688 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.894 71.204 108550000 9992600 98561000 0 0 0 0 0 0 0 0 0 0 0 0 0 8260 2455 7556 69383;69384;69385 55139;55140;55141 55140 4036;4037 3 DLVDSPASLASSLGSPLPR Unmodified 1880.9844 0.98435652 2103 Q04725 TLE2 Transducin-like enhancer protein 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 90.108 90.255 2 1.2386E-23 104580 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 125.61 111.95 10672000 0 0 0 0 0 0 0 1374200 0 1841800 1334700 1757100 0 1516400 2848300 8261 2103 7557 69386;69387;69388;69389;69390;69391 55142;55143;55144;55145 55143 4 DLVEALERDIISQNPNVRWDDIADLVEAK Unmodified 3335.6997 0.69974882 501 O75449 KATNA1 Katanin p60 ATPase-containing subunit A1 yes yes 0 0 2 By MS/MS 2 0 1 1 101.6 93.472 4 7.1869E-09 120340 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.051 52.751 6613800 6613800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8262 501 7558 69392 55146 55146 1 DLVELDPEVEGTK Unmodified 1442.7141 0.7140549 4395 Q9H4A5 GOLPH3L Golgi phosphoprotein 3-like yes yes 0 0 0 By MS/MS 2 0 1 1 76.099 71.261 2 0.012508 89062 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.951 46.18 13421000 0 13421000 0 0 0 0 0 0 0 0 0 0 0 0 0 8263 4395 7559 69393 55147 55147 1 DLVEMEQK Oxidation (M) 1006.4641 0.46411156 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 26.214 26.481 2 0.029538 28210 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 48.756 11.691 10051000 0 0 0 4193700 0 0 0 0 0 0 0 0 3381600 0 2475600 8264 2446 7560 69394;69395;69396 55148 55148 1 DLVEMEQK Unmodified 990.4692 0.46919694 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 38.159 38.325 2 0.032702 41963 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 54.157 22.868 31335000 0 0 0 2146600 2286400 0 3002600 2863700 2324800 3842700 4785100 5185800 0 0 4897100 8265 2446 7560 69397;69398;69399;69400;69401;69402;69403;69404;69405 55149 55149 1 DLVFNTESLPSVDNR Unmodified 1704.8319 0.83187862 3024 Q70CQ2 USP34 Ubiquitin carboxyl-terminal hydrolase 34 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.656 81.717 2 0.00011225 94696 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 88.441 72.902 59756000 0 0 0 2309500 3072500 5978900 3853600 3696600 3781100 5545600 7244200 6178900 3722400 6161100 8211500 8266 3024 7561 69406;69407;69408;69409;69410;69411;69412;69413;69414;69415;69416;69417 55150;55151;55152;55153;55154 55153 5 DLVHTEGQLQNEEIVAHDGSATYLR Unmodified 2794.3522 0.35219994 5220 Q9Y547 HSPB11 Intraflagellar transport protein 25 homolog yes yes 0 0 0 By MS/MS 10 0 1 1 74.461 74.801 3 9.0311E-102 85755 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 155.49 143.06 14473000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14473000 8267 5220 7562 69418 55155;55156 55156 2 DLVIEALK Unmodified 899.53278 0.53278348 4812 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 2 1 1 72.594 72.667 2 0.023017 85159 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.682 16.287 67698000 0 0 0 3541600 4343000 4982100 4577600 4656700 0 5810300 7081800 6608300 10707000 4586100 10803000 8268 4812 7563 69419;69420;69421;69422;69423;69424;69425;69426;69427;69428;69429;69430 55157;55158;55159;55160;55161;55162;55163;55164;55165;55166 55160 10 DLVIVAANLQK Unmodified 1182.6972 0.69722304 684 O95747 OXSR1 Serine/threonine-protein kinase OSR1 yes yes 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 76.407 76.511 2 0.0018868 88392 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 70.256 39.459 11594000 0 0 0 0 0 5092800 0 4132700 0 0 0 0 0 2368400 0 8269 684 7564 69431;69432;69433 55167 55167 1 DLVLLSEIEVAQANDIISSTEISSAEK Unmodified 2873.4757 0.47572869 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 0 0 By MS/MS By MS/MS 2.67 0.471 1 2 2 1 100.55 95.509 2;3 9.1555E-137 119445 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 156.11 126.77 15218000 11162000 4055400 0 0 0 0 0 0 0 0 0 0 0 0 0 8270 1226 7565 69434;69435;69436 55168;55169;55170;55171 55171 4 DLVLPTQALPASPALK Unmodified 1632.9451 0.94505789 2548 Q15554 TERF2 Telomeric repeat-binding factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 87.641 87.12 2 4.7392E-45 107393 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 154.36 147.31 246130000 0 150600000 0 2440300 6334400 7236600 6269100 7536700 6198900 9886300 8965000 10529000 7331500 8093600 14708000 8271 2548 7566 69437;69438;69439;69440;69441;69442;69443;69444;69445;69446;69447;69448;69449;69450 55172;55173;55174;55175;55176;55177;55178;55179;55180;55181;55182;55183;55184;55185;55186;55187 55176 16 DLVLSVHNR Unmodified 1051.5774 0.57744226 2475 Q15020 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 42.344 42.798 2 0.011616 47907 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 62.546 45.77 45199000 0 0 0 0 0 0 0 0 0 4075200 6522400 7767900 6779500 6793600 13260000 8272 2475 7567 69451;69452;69453;69454;69455;69456 55188;55189;55190;55191;55192 55191 5 DLVMGSSPQLK Unmodified 1173.6064 0.60635913 2706 Q53LP3 SOWAHC Ankyrin repeat domain-containing protein SOWAHC yes yes 0 0 0 By MS/MS 10 0 1 1 56.873 57.484 2 0.034747 64560 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.158 26.381 6867900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6867900 8273 2706 7568 69457 55193 55193 1 DLVPDNSK Unmodified 886.43961 0.43961137 5076 Q9Y224 C14orf166 UPF0568 protein C14orf166 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 1 1 1 1 1 1 1 1 1 1 1 1 1 24.081 23.594 2 0.0125 28021 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.375 62.216 254210000 392930 36478000 0 0 11606000 15362000 12438000 9653400 14444000 22282000 18917000 36710000 17014000 18793000 40121000 8274 5076 7569 69458;69459;69460;69461;69462;69463;69464;69465;69466;69467;69468;69469;69470 55194;55195;55196;55197;55198 55196 5 DLVQDPSLLGGTISAYK Unmodified 1775.9305 0.93053004 4579 Q9NQX3 GPHN Gephyrin;Molybdopterin adenylyltransferase;Molybdopterin molybdenumtransferase yes yes 0 0 0 By MS/MS 2 0 1 1 88.728 83.886 2 0.0024045 104272 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.116 41.841 28437000 0 28437000 0 0 0 0 0 0 0 0 0 0 0 0 0 8275 4579 7570 69471 55199 55199 1 DLVQLPVVTSSTIVR Unmodified 1625.9352 0.93522148 665 O95486 SEC24A Protein transport protein Sec24A yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 88.424 88.512 2 0.0033971 102712 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 44.612 36.307 3908700 0 0 0 0 0 1325800 0 0 0 1721800 0 0 0 861170 0 8276 665 7571 69472;69473;69474 55200;55201 55201 2 DLVSFPLSPAVR Unmodified 1299.7187 0.71868677 336 O43502 RAD51C DNA repair protein RAD51 homolog 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 87.037 87.178 2 0.0011685 100825 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.1 49.771 15467000 0 0 0 0 0 1220000 1222500 0 1245000 2045100 2275700 2777300 0 1309300 3372400 8277 336 7572 69475;69476;69477;69478;69479;69480;69481;69482 55202;55203;55204;55205;55206;55207;55208 55205 7 DLVSLACDPASQQPGPLNGSGQLK Unmodified 2451.2064 0.20638732 869 P08651 NFIC Nuclear factor 1 C-type yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 83.839 79.842 3 2.817E-14 99098 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 59.356 45.901 43661000 0 43661000 0 0 0 0 0 0 0 0 0 0 0 0 0 8278 869 7573 69483;69484 55209;55210;55211 55210 3 DLVSSLTSGLLTIGDR Unmodified 1645.8887 0.88866522 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 98.588 98.736 2 1.0043E-07 114252 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 108.37 93.682 4067000 0 0 0 0 0 0 0 1659800 899430 1507800 0 0 0 0 0 8279 1714 7574 69485;69486;69487 55212;55213;55214 55214 3 DLVSSLTSGLLTIGDRFGGALDAAAK Unmodified 2547.3544 0.35443177 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 1 By MS/MS 3 0 1 1 103.08 99.464 3 5.8796E-22 119623 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 88.79 54.782 3083900 0 3083900 0 0 0 0 0 0 0 0 0 0 0 0 0 8280 1714 7575 69488 55215;55216 55216 2 DLVTEDGADPNPYVK Unmodified 1631.7679 0.76788138 156 O00443 PIK3C2A Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.817 60.925 2 7.581E-10 69375 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 94.616 79.644 31923000 0 0 0 1383700 2895500 0 3594000 2811100 0 3375600 2827900 3348100 4454300 2882200 4350300 8281 156 7576 69489;69490;69491;69492;69493;69494;69495;69496;69497;69498;69499;69500 55217;55218;55219;55220;55221;55222;55223 55218 5 DLVTSLK Unmodified 774.44872 0.4487195 983 P13674 P4HA1 Prolyl 4-hydroxylase subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 51.648 46.801 2 0.03931 60710 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.381 20.978 182060000 0 177090000 4967400 0 0 0 0 0 0 0 0 0 0 0 0 8282 983 7577 69501;69502 55224 55224 1 DLVVPEK Unmodified 798.44872 0.4487195 2261 Q13257 MAD2L1 Mitotic spindle assembly checkpoint protein MAD2A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 7.33 3.77 2 4 1 1 1 1 1 1 38.934 36.898 2 0.025219 46003 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.74 9.7563 528950000 16460000 454440000 0 9888600 8954200 0 14206000 0 0 0 24996000 0 0 0 0 8283 2261 7578 69503;69504;69505;69506;69507;69508 55225;55226 55225 2 DLVVPGSK Unmodified 813.45962 0.45961853 1331 P33981 TTK Dual specificity protein kinase TTK yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 2 1 38.304 38.644 2 0.031681 42624 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 54.776 12.302 53966000 0 0 0 0 0 10638000 0 0 0 6597200 6252300 6463400 15752000 8263600 0 8284 1331 7579 69509;69510;69511;69512;69513;69514;69515 55227;55228 55227 2 DLVVPGSKPSGNDSCELR Unmodified 1928.9262 0.92618972 1331 P33981 TTK Dual specificity protein kinase TTK yes yes 0 0 1 By matching By MS/MS By matching 10 0 3 1 1 1 52.27 52.417 3 0.0017742 59496 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 32.387 15.309 12194000 0 0 0 0 0 0 3652200 5330900 0 0 0 0 0 3211100 0 8285 1331 7580 69516;69517;69518 55229 55229 1 DLYANTVLSGGSTMYPGIADR Oxidation (M) 2216.0419 0.041947754 2711 Q562R1 ACTBL2 Beta-actin-like protein 2 yes yes 0 1 0 By MS/MS 10 0 1 1 84.577 84.764 2 0.0051096 97831 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 41.092 33.181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8286 2711 7581 69519 55230 55230 4366 1 DLYANTVLSGGTTMYPGIADR Oxidation (M) 2230.0576 0.057597819 1951;1815 P60709;P63261 ACTB;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.14 3.23 3 4 21 3 4 1 2 2 1 1 1 2 3 3 1 2 2 82.196 81.034 2;3 0 94577 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 272.97 237.29 25751000000 12653000 1001600000 0 147060000 1041600000 2143300000 731540000 804490000 3147000 4359200000 3649300000 3720600000 686990000 2604800000 4844400000 8287 1815;1951 7582 69520;69521;69522;69523;69524;69525;69526;69527;69528;69529;69530;69531;69532;69533;69534;69535;69536;69537;69538;69539;69540;69541;69542;69543;69544;69545;69546;69547 55231;55232;55233;55234;55235;55236;55237;55238;55239;55240;55241;55242;55243;55244;55245;55246;55247;55248;55249;55250;55251;55252;55253;55254;55255;55256;55257;55258;55259;55260;55261;55262;55263;55264;55265 55235 2940 33 DLYANTVLSGGTTMYPGIADR Unmodified 2214.0627 0.062683196 1951;1815 P60709;P63261 ACTB;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.38 3.18 5 1 23 1 3 2 1 2 2 2 2 2 2 2 2 2 2 2 86.258 85.432 2;3 9.9373E-107 105494 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 220.61 208.7 2483300000 15920000 1140300000 24923000 9616600 64193000 40859000 21577000 67078000 40687000 220230000 140930000 104310000 24725000 79723000 488230000 8288 1815;1951 7582 69548;69549;69550;69551;69552;69553;69554;69555;69556;69557;69558;69559;69560;69561;69562;69563;69564;69565;69566;69567;69568;69569;69570;69571;69572;69573;69574;69575;69576 55266;55267;55268;55269;55270;55271;55272;55273;55274;55275;55276;55277;55278;55279;55280;55281;55282;55283;55284;55285;55286;55287;55288;55289;55290;55291;55292;55293;55294;55295;55296;55297 55272 28 DLYANTVLSGGTTMYPGIADRMQK 2 Oxidation (M) 2633.2465 0.24653758 1951;1815 P60709;P63261 ACTB;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed no no 0 2 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 80.12 74.572 3 6.6861E-23 93844 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.29 95.389 215550000 92600000 122940000 0 0 0 0 0 0 0 0 0 0 0 0 0 8289 1815;1951 7583 69577;69578;69579 55298;55299 55298 2940;2941 2 DLYANTVLSGGTTMYPGIADRMQK Oxidation (M) 2617.2516 0.25162295 1951;1815 P60709;P63261 ACTB;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed no no 0 1 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 6 2 2 5 1 83.913 78.978 2;3 2.2425E-97 99364 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 151.33 147.66 907720000 218890000 673950000 14879000 0 0 0 0 0 0 0 0 0 0 0 0 8290 1815;1951 7583 69580;69581;69582;69583;69584;69585;69586;69587 55300;55301;55302;55303;55304;55305;55306;55307;55308;55309 55306 2940;2941 10 DLYANTVLSGGTTMYPGIADRMQK Unmodified 2601.2567 0.25670833 1951;1815 P60709;P63261 ACTB;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed no no 0 0 1 By MS/MS By MS/MS 2.17 0.373 5 1 2 4 88.448 83.256 2;3 8.1792E-110 104509 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 166.34 160.05 568620000 118320000 450300000 0 0 0 0 0 0 0 0 0 0 0 0 0 8291 1815;1951 7583 69588;69589;69590;69591;69592;69593 55310;55311;55312;55313;55314;55315;55316 55315 7 DLYEDELVPLFEK Unmodified 1608.7923 0.79230522 322 O43390 HNRNPR Heterogeneous nuclear ribonucleoprotein R yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 93.112 93.281 2 0.013973 108128 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.284 40.052 3967400 0 0 0 0 0 0 0 0 0 0 1022400 0 0 0 2945100 8292 322 7584 69594;69595 55317 55317 1 DLYEPTHGGK Unmodified 1115.5247 0.52473799 642 O95340 PAPSS2 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.14 3.31 5 2 22 1 4 2 2 2 1 2 2 1 2 2 2 2 2 2 21.2 20.435 2 0.0014968 21442 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 90.709 17.044 497540000 26637000 285580000 12870000 9597200 5804500 10762000 11042000 13068000 7616900 17007000 21936000 20769000 15876000 15677000 23291000 8293 642 7585 69596;69597;69598;69599;69600;69601;69602;69603;69604;69605;69606;69607;69608;69609;69610;69611;69612;69613;69614;69615;69616;69617;69618;69619;69620;69621;69622;69623;69624 55318;55319;55320;55321;55322;55323;55324;55325;55326;55327;55328;55329;55330;55331;55332;55333;55334;55335;55336;55337;55338 55337 21 DLYIRPNIAQK Unmodified 1329.7405 0.74048484 5231 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.3 2.25 2 21 2 2 1 2 1 2 2 2 2 2 1 2 2 56.993 56.411 2;3 0.0005086 63597 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 128.6 95.603 447420000 95853000 0 0 18519000 2946400 32847000 5909800 34762000 24030000 30394000 39931000 46191000 8423800 32065000 75545000 8294 5231 7586 69625;69626;69627;69628;69629;69630;69631;69632;69633;69634;69635;69636;69637;69638;69639;69640;69641;69642;69643;69644;69645;69646;69647 55339;55340;55341;55342;55343;55344;55345;55346;55347;55348;55349;55350;55351;55352;55353 55351 12 DLYLASVFHATAFELDTDGNPFDQDIYGREELRSPK Unmodified 4128.9705 0.97050396 1624 P50454 SERPINH1 Serpin H1 yes yes 0 0 2 By MS/MS 2 0 1 1 99.203 91.072 4 8.3878E-164 117460 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 148.76 144.29 28237000 28237000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8295 1624 7587 69648 55354 55354 1 DLYLIPLSAQDPVPSK Unmodified 1754.9455 0.94545182 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.08 1 1 22 2 1 2 2 2 2 2 2 2 2 2 2 1 89.796 89.537 2;3 0.00018811 104110 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 84.479 71.523 363820000 0 112190000 0 4709200 16031000 17583000 14945000 20681000 18026000 33432000 23493000 32403000 17608000 18700000 34023000 8296 4139 7588 69649;69650;69651;69652;69653;69654;69655;69656;69657;69658;69659;69660;69661;69662;69663;69664;69665;69666;69667;69668;69669;69670;69671;69672 55355;55356;55357;55358;55359;55360;55361;55362;55363;55364;55365;55366;55367;55368;55369;55370;55371 55368 17 DLYNWLEVEFNPLK Unmodified 1778.8879 0.88793694 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 0 By MS/MS 2 0 1 1 101.82 93.693 2 0.00081975 120623 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.653 76.234 3460800 3460800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8297 2378 7589 69673 55372 55372 1 DLYQEWK Unmodified 980.46035 0.46034682 4350;4576 Q9H1H9;Q9NQT8 KIF13A;KIF13B Kinesin-like protein KIF13A;Kinesin-like protein KIF13B no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 55.641 55.898 2 0.030762 62688 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 74.439 50.252 12881000 0 0 0 0 0 2915700 0 0 1965400 0 0 0 1934800 2232800 3832100 8298 4350;4576 7590 69674;69675;69676;69677;69678 55373 55373 1 DLYSALIK Unmodified 921.51713 0.51713341 550 O75844 ZMPSTE24 CAAX prenyl protease 1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.283 77.343 2 0.018051 89306 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 64.757 34.951 100260000 0 0 0 5377600 7331400 6645100 7084300 10264000 8652000 11118000 10703000 9387900 6990100 7590400 9110700 8299 550 7591 69679;69680;69681;69682;69683;69684;69685;69686;69687;69688;69689;69690 55374;55375;55376 55375 3 DLYVNPNHQTSLGQER Unmodified 1869.8969 0.8969385 5276 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 48.156 48.307 3 0.00051597 53742 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 68.944 53.552 24073000 0 0 0 0 0 8394200 0 0 0 9857600 0 0 0 5820900 0 8300 5276 7592 69691;69692;69693 55377;55378;55379 55379 2 DLYVNPNHQTSLGQERLTDQEIGDGK Unmodified 2926.4057 0.40569207 5276 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 yes yes 0 0 1 By MS/MS 2 0 1 1 69.084 65.404 4 0.0014178 80913 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 35.32 28.522 5723000 0 0 5723000 0 0 0 0 0 0 0 0 0 0 0 0 8301 5276 7593 69694 55380 55380 1 DMAAAGLHSNVR Oxidation (M) 1256.5932 0.59316868 4944 Q9UJX3 ANAPC7 Anaphase-promoting complex subunit 7 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching 10 0 14 1 2 2 1 1 1 2 2 1 1 18.752 18.981 2;3 0.0029287 19530 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 57.532 45.306 40671000 0 0 0 0 1490000 6453600 5379400 1208200 0 2159700 2201200 6825800 10045000 1773100 3134900 8302 4944 7594 69695;69696;69697;69698;69699;69700;69701;69702;69703;69704;69705;69706;69707;69708 55381;55382;55383;55384;55385 55381 6286 3 DMAAAGLHSNVR Unmodified 1240.5983 0.59825406 4944 Q9UJX3 ANAPC7 Anaphase-promoting complex subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 1 1 2 2 1 2 2 2 2 2 2 30.926 31.189 2;3 0.00085814 33822 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 73.499 55.188 137500000 0 0 0 5456900 4810600 8897600 9240200 11287000 3461100 5808800 15200000 20987000 15884000 13886000 22578000 8303 4944 7594 69709;69710;69711;69712;69713;69714;69715;69716;69717;69718;69719;69720;69721;69722;69723;69724;69725;69726;69727;69728 55386;55387;55388;55389;55390;55391;55392;55393 55390 7 DMAAFNERPIIFALSNPTSK Oxidation (M) 2237.1151 0.11505312 1534 P48163 ME1 NADP-dependent malic enzyme yes yes 0 1 1 By MS/MS By MS/MS 10 0 2 1 1 86.464 86.608 3 0.00021512 100052 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.696 36.987 20307000 0 0 0 0 0 0 0 0 0 0 0 6148600 0 0 14158000 8304 1534 7595 69729;69730 55394 55394 2435 1 DMAAPGTSSVPAPTAGNAEK Oxidation (M) 1886.868 0.86800613 3041 Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.71 3.15 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50.117 50.71 2 8.6771E-60 91916 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 139.94 122.73 454010000 20503000 6869300 0 22296000 27246000 35073000 43170000 24294000 25225000 37161000 46009000 45527000 47651000 26113000 46872000 8305 3041 7596 69731;69732;69733;69734;69735;69736;69737;69738;69739;69740;69741;69742;69743;69744 55395;55396;55397;55398;55399;55400;55401;55402;55403;55404;55405;55406;55407;55408;55409 55400 4651 14 DMAAPGTSSVPAPTAGNAEK Unmodified 1870.8731 0.87309151 3041 Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.874 50.028 2 2.6448E-58 56195 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 127.36 104.88 408230000 0 0 0 17159000 24103000 21720000 26271000 29578000 24083000 32909000 42471000 67579000 31460000 34359000 56536000 8306 3041 7596 69745;69746;69747;69748;69749;69750;69751;69752;69753;69754;69755;69756 55410;55411;55412;55413;55414;55415;55416;55417;55418;55419;55420;55421;55422 55415 13 DMAIATGGAVFGEEGLTLNLEDVQPHDLGK Oxidation (M) 3112.5023 0.50229457 930 P10809 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 95.611 89.113 3 2.0416E-15 112594 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.98 61.139 100880000 77862000 23022000 0 0 0 0 0 0 0 0 0 0 0 0 0 8307 930 7597 69757;69758 55423;55424 55423 1193 2 DMAIATGGAVFGEEGLTLNLEDVQPHDLGK Unmodified 3096.5074 0.50737995 930 P10809 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 0 0 0 By MS/MS 2 0 2 2 96.088 87.958 3;4 3.1105E-167 114967 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 164.35 158.38 73320000 73320000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8308 930 7597 69759;69760 55425;55426;55427 55426 3 DMALATK Oxidation (M) 764.37384 0.37383999 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 1 0 By MS/MS 2 0 1 1 9.0025 5.7477 1 0.013113 8391 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.833 42.141 7406300 0 7406300 0 0 0 0 0 0 0 0 0 0 0 0 0 8309 1226 7598 69761 55428 55428 1801 0 DMAQLPETEIAPAK Oxidation (M) 1528.7443 0.74430917 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.65 3.68 2 1 2 12 3 2 1 1 1 1 1 1 1 1 1 1 1 1 63.945 63.316 2 1.8955E-29 92790 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 140.61 124.72 504610000 61110000 40387000 0 25126000 24659000 30484000 28898000 25540000 31599000 40774000 44694000 35555000 51469000 31053000 33264000 8310 1226 7599 69762;69763;69764;69765;69766;69767;69768;69769;69770;69771;69772;69773;69774;69775;69776;69777;69778 55429;55430;55431;55432;55433;55434;55435;55436;55437;55438;55439;55440;55441;55442;55443;55444;55445 55435 1802 17 DMAQLPETEIAPAK Unmodified 1512.7494 0.74939455 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 69.444 68.273 2 1.2814E-11 79287 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 122.7 107.13 451620000 11661000 104540000 0 15282000 17434000 18694000 20055000 15270000 15342000 30692000 42480000 46024000 21010000 38529000 54605000 8311 1226 7599 69779;69780;69781;69782;69783;69784;69785;69786;69787;69788;69789;69790;69791;69792;69793 55446;55447;55448;55449;55450;55451;55452;55453;55454;55455;55456;55457;55458;55459;55460;55461;55462 55458 17 DMAQSIYRPSK Unmodified 1294.634 0.63397086 2320 Q13573 SNW1 SNW domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 2 2 2 1 1 1 2 2 1 2 2 2 37.636 37.797 2;3 0.021221 41929 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 90.108 74.957 180370000 0 0 0 13784000 13610000 13475000 4056800 4002200 1956400 22827000 20157000 6929700 25937000 18826000 34807000 8312 2320 7600 69794;69795;69796;69797;69798;69799;69800;69801;69802;69803;69804;69805;69806;69807;69808;69809;69810;69811;69812;69813 55463;55464;55465 55463 1 DMASLPSESNEPK Unmodified 1403.6239 0.62385968 5301 Q9Y6Y8 SEC23IP SEC23-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 44.17 43.472 2 1.8098E-11 49010 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 120.09 109.34 131960000 4602700 0 0 7959500 5287400 8304900 7457700 11200000 0 23860000 0 0 16767000 16450000 30070000 8313 5301 7601 69814;69815;69816;69817;69818;69819;69820;69821;69822;69823;69824;69825 55466;55467;55468;55469;55470;55471;55472;55473;55474;55475;55476 55468 10 DMASLPSESNEPK Oxidation (M) 1419.6188 0.61877431 5301 Q9Y6Y8 SEC23IP SEC23-interacting protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.58 3.17 1 1 10 2 1 1 1 1 1 1 1 1 1 1 50.342 51.887 2 5.772E-09 34898 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 110.39 103.73 75701000 18808000 0 0 0 0 0 0 0 20718000 0 22677000 0 0 13498000 0 8314 5301 7601 69826;69827;69828;69829;69830;69831;69832;69833;69834;69835;69836;69837 55477;55478;55479;55480;55481;55482;55483;55484;55485;55486;55487;55488 55478 6701 12 DMCSFDNEQLFTMK 2 Oxidation (M) 1796.7056 0.70555718 1443 P41743 PRKCI Protein kinase C iota type yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 70.065 70.114 2 0.0022963 80823 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 56.094 53.581 10508000 0 0 0 0 2169800 0 0 0 0 0 0 4471400 2395900 1470700 0 8315 1443 7602 69838;69839;69840;69841 55489;55490 55490 2274;2275 0 DMDEPSPVPNVEEVTLPK Oxidation (M) 2010.9456 0.94558775 3475 Q8TAQ2 SMARCC2 SWI/SNF complex subunit SMARCC2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80.958 80.093 2 2.0862E-26 92877 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.53 102.45 417760000 21869000 61882000 0 18935000 22025000 30663000 23165000 20988000 20840000 33969000 28763000 42725000 28122000 25298000 38513000 8316 3475 7603 69842;69843;69844;69845;69846;69847;69848;69849;69850;69851;69852;69853;69854;69855 55491;55492;55493;55494;55495;55496;55497;55498;55499;55500 55494 5000 10 DMDEPSPVPNVEEVTLPK Unmodified 1994.9507 0.95067313 3475 Q8TAQ2 SMARCC2 SWI/SNF complex subunit SMARCC2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 82.992 82.298 2 0.00062479 101342 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.102 69.154 127700000 14525000 0 0 4429100 2895400 8390800 0 8553900 4928500 22120000 9541100 14701000 0 12218000 25398000 8317 3475 7603 69856;69857;69858;69859;69860;69861;69862;69863;69864;69865;69866 55501;55502;55503;55504 55502 4 DMDEVEEK Oxidation (M) 1009.391 0.3910062 713 O96007 MOCS2 Molybdopterin synthase catalytic subunit yes yes 0 1 0 By MS/MS 1 0 1 1 106.17 111.43 2 0.061037 92067 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 77.923 53.72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8318 713 7604 69867 55505 55505 1 DMDFLNK Unmodified 881.3953 0.39530372 3483 Q8TBX8 PIP4K2C Phosphatidylinositol 5-phosphate 4-kinase type-2 gamma yes yes 0 0 0 By MS/MS 2 0 1 1 60.363 54.505 2 0.037279 69959 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.913 55.793 43394000 0 43394000 0 0 0 0 0 0 0 0 0 0 0 0 0 8319 3483 7605 69868 55506 55506 1 DMDIAGFTQK Unmodified 1124.5172 0.51720977 3639 Q92614 MYO18A Unconventional myosin-XVIIIa yes yes 0 0 0 By MS/MS 2 0 1 1 69.504 63.635 2 0.0049244 81036 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.308 73.15 19150000 0 19150000 0 0 0 0 0 0 0 0 0 0 0 0 0 8320 3639 7606 69869 55507 55507 1 DMDLVEVNEAFAPQYLAVERSLDLDISK Unmodified 3179.5696 0.56964585 1465 P42765 ACAA2 3-ketoacyl-CoA thiolase, mitochondrial yes yes 0 0 1 By MS/MS 2 0 1 1 99.876 91.746 3 3.6062E-07 118229 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.66 43.243 22299000 22299000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8321 1465 7607 69870 55508 55508 1 DMDLWEQQEEERITTMQLEREK Unmodified 2836.3008 0.30075799 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 2 By MS/MS 2 0 2 2 85.855 77.724 3;4 5.279E-25 101427 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 109.66 102.78 41771000 41771000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8322 2378 7608 69871;69872 55509;55510;55511 55511 3 DMDLWEQQEEERITTMQLEREK Oxidation (M) 2852.2957 0.29567261 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 1 2 By MS/MS 2 0 1 1 81.976 73.845 3 1.7215E-07 96756 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.909 51.984 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8323 2378 7608 69873 55512 55512 3863 1 DMDSTLSR Unmodified 923.40185 0.40184566 4455 Q9H8V3 ECT2 Protein ECT2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 23.853 23.934 2 0.013375 24638 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 72.492 58.913 24787000 0 0 0 0 3458500 0 3801500 0 0 5399800 12127000 0 0 0 0 8324 4455 7609 69874;69875;69876;69877 55513 55513 1 DMEANLLPGFLR Oxidation (M) 1390.6915 0.69148574 379 O43913 ORC5 Origin recognition complex subunit 5 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 88.6 88.726 2 0.00013898 103324 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 84.213 73.689 19275000 0 0 0 0 0 4605400 1285900 0 0 5146600 2618600 3857000 1761500 0 0 8325 379 7610 69878;69879;69880;69881;69882;69883 55514;55515;55516;55517;55518 55517 488 5 DMEDPTPVPNIEEVVLPK Oxidation (M) 2036.9976 0.99762332 3687 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 89.905 88.877 2 6.0935E-27 103606 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 110.31 102.58 374320000 13689000 144230000 0 5957500 16760000 21060000 12343000 12970000 14132000 28268000 20773000 23046000 14752000 16210000 30124000 8326 3687 7611 69884;69885;69886;69887;69888;69889;69890;69891;69892;69893;69894;69895;69896;69897;69898 55519;55520;55521;55522;55523;55524;55525;55526;55527;55528;55529;55530;55531;55532;55533;55534;55535;55536;55537 55537 5244 19 DMEDPTPVPNIEEVVLPK Unmodified 2021.0027 0.0027087015 3687 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.08 3.33 2 1 9 1 2 1 1 1 1 1 1 1 1 1 91.988 90.711 2 1.2864E-05 111455 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.35 107.96 247790000 12920000 209780000 0 0 1511100 1695200 1062400 2116100 0 3021900 1661200 2384900 0 1962100 9679900 8327 3687 7611 69899;69900;69901;69902;69903;69904;69905;69906;69907;69908;69909;69910 55538;55539;55540;55541;55542;55543;55544;55545;55546;55547;55548 55541 11 DMEESIR Unmodified 878.38038 0.38038194 996 P14314 PRKCSH Glucosidase 2 subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 25.235 25.43 2 0.028147 27148 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 76.847 35.926 181900000 0 0 0 0 8532400 7993200 11119000 11218000 6123800 12028000 28286000 0 14292000 24648000 57659000 8328 996 7612 69911;69912;69913;69914;69915;69916;69917;69918;69919;69920 55549;55550;55551;55552;55553;55554 55549 6 DMEESIR Oxidation (M) 894.3753 0.37529656 996 P14314 PRKCSH Glucosidase 2 subunit beta yes yes 0 1 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.458 11.604 2 0.041677 9965 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.163 25.996 74465000 0 0 0 3409900 3330900 3865400 3885000 3976600 3066200 0 8885500 13297000 7120600 7955500 15672000 8329 996 7612 69921;69922;69923;69924;69925;69926;69927;69928;69929;69930;69931 55555 55555 1 DMEGLVDTSVAK Unmodified 1263.6017 0.60166768 1602 P49815 TSC2 Tuberin yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 63.065 63.403 2 0.010965 71773 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.879 29.998 16702000 0 0 0 0 0 3506800 0 0 0 0 0 7450700 0 0 5744300 8330 1602 7613 69932;69933;69934 55556;55557 55556 2 DMEIAELK Oxidation (M) 963.4583 0.45829791 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 38.965 39.075 2 0.0053449 43943 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 87.323 44.322 75425000 0 0 0 0 8514300 8310700 9333800 8241700 10425000 10825000 8553200 0 11222000 0 0 8331 2556 7614 69935;69936;69937;69938;69939;69940;69941;69942 55558;55559;55560;55561;55562;55563 55563 4191 6 DMEIAELK Unmodified 947.46338 0.46338328 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 58.588 58.684 2 0.048796 66823 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 47.349 29.792 50609000 0 0 0 0 4750600 8539400 6050500 5714400 7471900 7519700 0 10562000 0 0 0 8332 2556 7614 69943;69944;69945;69946;69947;69948;69949 55564 55564 1 DMEIAQTQK Oxidation (M) 1078.4965 0.49647433 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.57 3.85 2 2 10 2 2 1 1 1 1 1 1 1 1 1 1 25.125 25.167 2 0.00097916 99646 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 139.88 124.73 155020000 50605000 47943000 0 0 3137400 4090600 4026000 3195500 4222700 5615400 6520300 10819000 0 5846300 9003200 8333 1226 7615 69950;69951;69952;69953;69954;69955;69956;69957;69958;69959;69960;69961;69962;69963 55565;55566;55567;55568;55569;55570;55571;55572;55573;55574;55575;55576;55577;55578 55574 1803 14 DMEIAQTQK Unmodified 1062.5016 0.5015597 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 6 4 2 2 1 1 1 1 28.274 23.363 2 0.0053328 30745 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.12 74.502 33921000 11397000 22524000 0 0 0 0 0 0 0 0 0 0 0 0 0 8334 1226 7615 69964;69965;69966;69967 55579;55580;55581 55579 3 DMEIIAK Unmodified 818.42079 0.42079019 5060 Q9UPT9 USP22 Ubiquitin carboxyl-terminal hydrolase 22 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 42.875 43.034 2 0.027575 48181 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 77.374 47.176 69732000 0 0 0 0 8244200 0 11085000 10045000 7224000 9731200 0 0 11732000 0 11671000 8335 5060 7616 69968;69969;69970;69971;69972;69973;69974 55582 55582 1 DMELPTEK Unmodified 961.44265 0.44264784 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 43.729 42.77 2 0.006389 47199 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 101.28 83.436 273630000 15719000 60383000 0 15216000 11244000 13343000 0 11450000 12197000 16880000 30842000 0 23210000 20896000 42250000 8336 1226 7617 69975;69976;69977;69978;69979;69980;69981;69982;69983;69984;69985;69986 55583;55584;55585;55586;55587;55588;55589;55590;55591;55592;55593 55589 11 DMELPTEK Oxidation (M) 977.43756 0.43756246 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 1 0 By MS/MS By MS/MS 5.5 4.5 1 1 1 1 65.433 68.066 2 0.035952 25633 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 73.26 55.274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8337 1226 7617 69987;69988 55594;55595 55594 2 DMEQFFDDLSDSFSGTEPEVHK Unmodified 2559.0748 0.074764025 4945 Q9UJX4 ANAPC5 Anaphase-promoting complex subunit 5 yes yes 0 0 0 By MS/MS 2 0 1 1 98.279 90.148 3 1.0309E-15 116319 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.145 68.683 11190000 11190000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8338 4945 7618 69989 55596 55596 1 DMEQLLALGK Unmodified 1116.5849 0.5848954 37;3836 A8MPP1;Q92771;Q96FC9 DDX11L8;DDX12P;DDX11 Putative ATP-dependent RNA helicase DDX11-like protein 8;Putative ATP-dependent RNA helicase DDX12;Probable ATP-dependent RNA helicase DDX11 no no 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 83.182 83.324 2 0.0052216 96563 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 69.825 54.163 32792000 0 0 0 0 0 3440600 1331500 2629900 0 4760600 5108300 4710000 0 4618500 6192500 8339 37;3836 7619 69990;69991;69992;69993;69994;69995;69996;69997 55597;55598;55599 55598 3 DMESDYSGQGVDQLQR Unmodified 1826.7741 0.77410575 787 P04818 TYMS Thymidylate synthase yes yes 0 0 0 By MS/MS 10 0 1 1 53.587 54.245 2 1.0861E-19 60649 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 138.45 131.56 4222300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4222300 8340 787 7620 69998 55600 55600 1 DMESFATK Oxidation (M) 943.3957 0.39569765 4837 Q9UBD5 ORC3 Origin recognition complex subunit 3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 17.503 17.67 2 0.03588 17564 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 45.335 29.181 21749000 0 0 0 0 2503900 0 2677300 2830100 1417600 3347700 3248200 0 3006400 2717600 0 8341 4837 7621 69999;70000;70001;70002;70003;70004;70005;70006 55601;55602 55602 2 DMESHVFLK Unmodified 1104.5274 0.52738052 3971 Q96RN5 MED15 Mediator of RNA polymerase II transcription subunit 15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 49.606 49.664 2 0.003452 55319 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 104.06 58.041 31934000 0 0 0 9658700 0 0 0 0 0 0 0 22275000 0 0 0 8342 3971 7622 70007;70008;70009;70010 55603;55604;55605;55606 55604 4 DMESHVFLK Oxidation (M) 1120.5223 0.52229515 3971 Q96RN5 MED15 Mediator of RNA polymerase II transcription subunit 15 yes yes 0 1 0 By matching By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 39.003 35.649 2 0.032498 39151 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 42.287 10.445 18637000 4324500 0 8493100 0 0 0 0 5819400 0 0 0 0 0 0 0 8343 3971 7622 70011;70012;70013 55607;55608 55607 2 DMESPTK Oxidation (M) 822.34293 0.3429338 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 1 0 By MS/MS 1 0 1 1 106.23 111.49 2 0.031422 92135 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 83.753 56.585 50236000 50236000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8344 1226 7623 70014 55609 55609 1 DMEVLSQEIVR Oxidation (M) 1333.6548 0.65476588 2689 Q4V328 GRIPAP1 GRIP1-associated protein 1 yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 60.651 60.962 2 0.0093801 69488 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.297 45.026 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8345 2689 7624 70015;70016 55610;55611 55611 4343 2 DMFCAGRVPEEDLK Unmodified 1665.7491 0.74907697 4065 Q99832 CCT7 T-complex protein 1 subunit eta yes yes 0 0 1 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 64.778 65.024 3 0.036898 73821 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 29.013 18.816 16445000 0 0 0 0 0 4031500 1971200 0 0 0 2979500 0 0 0 7462700 8346 4065 7625 70017;70018;70019;70020 55612 55612 1 DMFDPHGWSEDSYYEALAK Unmodified 2259.9419 0.94189936 4907 Q9UHR5 SAP30BP SAP30-binding protein yes yes 0 0 0 By MS/MS 2 0 1 1 90.118 81.988 3 0.010864 106557 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 31.358 31.092 4778700 4778700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8347 4907 7626 70021 55613 55613 1 DMFEEALR Unmodified 1009.4539 0.45388123 1332 P33991 MCM4 DNA replication licensing factor MCM4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.174 68.255 2 0.013935 78670 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 71.296 28.821 99088000 0 0 0 3172300 2547300 6042600 4428300 4696100 3264200 9666800 12816000 10779000 6882300 9783400 25009000 8348 1332 7627 70022;70023;70024;70025;70026;70027;70028;70029;70030;70031;70032;70033 55614;55615;55616;55617;55618;55619 55618 6 DMFEEALRALADDDFLTVTGK Oxidation (M) 2372.1206 0.12059201 1332 P33991 MCM4 DNA replication licensing factor MCM4 yes yes 0 1 1 By MS/MS By MS/MS 2.5 0.5 2 2 2 2 99.793 94.863 3 2.3939E-86 115082 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 154.84 147.15 334680000 253600000 81084000 0 0 0 0 0 0 0 0 0 0 0 0 0 8349 1332 7628 70034;70035;70036;70037 55620;55621;55622;55623;55624 55621 1993 5 DMFEEALRALADDDFLTVTGK Unmodified 2356.1257 0.12567738 1332 P33991 MCM4 DNA replication licensing factor MCM4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.29 0.452 5 2 4 2 1 102.26 96.733 2;3 5.1706E-87 120672 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 159.04 154.84 686340000 615420000 69712000 1213100 0 0 0 0 0 0 0 0 0 0 0 0 8350 1332 7628 70038;70039;70040;70041;70042;70043;70044 55625;55626;55627;55628;55629;55630;55631;55632;55633 55629 9 DMFQETMEAMR 3 Oxidation (M) 1435.5418 0.54178631 1356 P35579 MYH9 Myosin-9 yes yes 0 3 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 27.848 28.045 2 0.00020952 30275 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 93.325 83.093 850360000 0 0 0 45816000 66303000 81827000 91621000 46669000 62598000 75020000 82178000 110500000 92448000 42119000 53257000 8351 1356 7629 70045;70046;70047;70048;70049;70050;70051;70052;70053;70054;70055;70056;70057;70058;70059;70060;70061;70062;70063;70064;70065;70066;70067;70068 55634;55635;55636;55637;55638;55639;55640;55641;55642;55643;55644;55645;55646;55647;55648;55649;55650;55651;55652;55653;55654;55655;55656;55657;55658;55659;55660 55655 2070;2071;2072 27 DMFQETMEAMR Oxidation (M) 1403.552 0.55195707 1356 P35579 MYH9 Myosin-9 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 30 3 2 2 2 3 1 2 3 3 3 3 3 64.446 64.551 2 0.00019142 70776 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 103.55 101.39 612390000 0 0 0 36040000 36936000 18749000 41037000 45923000 5828100 52452000 91277000 94696000 54496000 46807000 88149000 8352 1356 7629 70069;70070;70071;70072;70073;70074;70075;70076;70077;70078;70079;70080;70081;70082;70083;70084;70085;70086;70087;70088;70089;70090;70091;70092;70093;70094;70095;70096;70097;70098 55661;55662;55663;55664;55665;55666;55667;55668;55669;55670;55671;55672;55673;55674;55675;55676;55677;55678;55679;55680;55681;55682;55683;55684;55685;55686;55687;55688;55689;55690 55667 2070;2071;2072 29 DMFQETMEAMR Unmodified 1387.557 0.55704245 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.417 81.478 2 3.0126E-05 94123 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 118.18 115.97 307590000 0 0 0 4350000 9758900 16584000 5734100 25214000 13013000 38780000 33296000 38798000 11346000 20604000 90114000 8353 1356 7629 70099;70100;70101;70102;70103;70104;70105;70106;70107;70108;70109;70110 55691;55692;55693;55694;55695;55696;55697;55698;55699;55700;55701;55702 55697 12 DMFQETMEAMR 2 Oxidation (M) 1419.5469 0.54687169 1356 P35579 MYH9 Myosin-9 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 2 1 2 1 1 2 1 2 1 1 2 44.613 44.805 2 0.0037563 51504 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.654 46.342 243900000 0 0 0 28755000 12275000 24501000 15650000 0 12623000 28973000 19115000 47934000 10773000 20279000 23023000 8354 1356 7629 70111;70112;70113;70114;70115;70116;70117;70118;70119;70120;70121;70122;70123;70124;70125;70126 55703;55704;55705;55706;55707;55708 55706 2070;2071;2072 2 DMGIQDDELSLR Oxidation (M) 1406.6348 0.63475872 3986 Q96S82 UBL7 Ubiquitin-like protein 7 yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 61.296 61.575 2 0.0086099 69419 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 61.353 47.762 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8355 3986 7630 70127;70128 55709;55710 55710 5467 2 DMGITEYEPR Unmodified 1209.5336 0.53358811 2616 Q16594;Q9HBM6 TAF9;TAF9B Transcription initiation factor TFIID subunit 9;Transcription initiation factor TFIID subunit 9B yes no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 58.5 58.554 2 0.0061036 66463 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 66.27 55.049 23979000 0 0 0 1610100 1798600 0 1925400 3198700 0 2899600 4526300 0 3345300 0 4674900 8356 2616 7631 70129;70130;70131;70132;70133;70134;70135;70136;70137 55711;55712;55713;55714;55715;55716;55717 55714 7 DMGLVTPEAASLGTVIK Oxidation (M) 1716.8968 0.89678707 4752 Q9NYV4 CDK12 Cyclin-dependent kinase 12 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.21 2.31 1 1 17 2 1 2 1 2 1 1 1 1 2 1 2 2 83.185 82.824 2;3 1.6218E-18 95135 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 100.19 66.958 338690000 0 80005000 0 8255200 14992000 18510000 18475000 14309000 15854000 25548000 24008000 26082000 16626000 32297000 43730000 8357 4752 7632 70138;70139;70140;70141;70142;70143;70144;70145;70146;70147;70148;70149;70150;70151;70152;70153;70154;70155;70156 55718;55719;55720;55721;55722;55723;55724;55725;55726;55727;55728;55729;55730;55731;55732;55733 55729 6130 16 DMGLVTPEAASLGTVIK Unmodified 1700.9019 0.90187244 4752 Q9NYV4 CDK12 Cyclin-dependent kinase 12 yes yes 0 0 0 By MS/MS 2 0 1 1 91.28 86.369 2 6.4821E-05 107421 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.412 67.533 77937000 0 77937000 0 0 0 0 0 0 0 0 0 0 0 0 0 8358 4752 7632 70157 55734 55734 1 DMGSCEIYPQTIQHNPNGR Oxidation (M) 2231.9688 0.96879959 1358 P35606 COPB2 Coatomer subunit beta' yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 46.889 47.065 3 1.7402E-08 52791 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 78.441 77.518 46883000 0 0 0 0 4431300 0 5175000 0 0 8117700 8598600 0 0 0 20560000 8359 1358 7633 70158;70159;70160;70161;70162;70163 55735;55736;55737;55738;55739;55740 55738 2101 6 DMGSCEIYPQTIQHNPNGR Unmodified 2215.9739 0.97388496 1358 P35606 COPB2 Coatomer subunit beta' yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 54.411 54.732 3 0.00062552 61470 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.082 46.253 30368000 0 0 0 0 0 0 0 6106200 0 3942700 0 0 0 0 20320000 8360 1358 7633 70164;70165;70166 55741 55741 1 DMGSVALDAGTAK Oxidation (M) 1250.5813 0.58126659 4519 Q9HCN4 GPN1 GPN-loop GTPase 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.6 4.18 1 1 3 1 1 1 1 1 48.65 48.862 2 7.4249E-14 40324 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.74 113.89 40020000 11440000 12260000 0 0 0 4716500 0 0 0 0 0 0 6747100 4856500 0 8361 4519 7634 70167;70168;70169;70170;70171 55742;55743;55744 55742 5944 3 DMGSVALDAGTAK Unmodified 1234.5864 0.58635197 4519 Q9HCN4 GPN1 GPN-loop GTPase 1 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 50.051 50.051 2 0.00054263 56722 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 78.342 59.562 15690000 0 0 0 0 3810000 0 0 0 0 0 0 0 5340700 6539500 0 8362 4519 7634 70172;70173;70174 55745;55746 55746 2 DMGTVVLGK Oxidation (M) 934.47937 0.4793677 1014 P15170;Q8IYD1 GSPT1;GSPT2 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A;Eukaryotic peptide chain release factor GTP-binding subunit ERF3B yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 32.154 31.375 2 0.0079076 34569 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 61.962 46.33 685010000 0 424500000 11652000 13117000 16178000 28066000 22899000 14783000 16406000 30042000 27574000 0 19840000 23470000 36478000 8363 1014 7635 70175;70176;70177;70178;70179;70180;70181;70182;70183;70184;70185;70186;70187;70188 55747;55748;55749;55750;55751;55752;55753;55754;55755;55756;55757;55758 55748 1402 12 DMGTVVLGK Unmodified 918.48445 0.48445308 1014 P15170;Q8IYD1 GSPT1;GSPT2 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A;Eukaryotic peptide chain release factor GTP-binding subunit ERF3B yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51.75 50.588 2 0.0050805 57747 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 84.227 49.026 1590100000 34030000 1153700000 10261000 20069000 19215000 32867000 26014000 26519000 17552000 39008000 46119000 49647000 32337000 0 82705000 8364 1014 7635 70189;70190;70191;70192;70193;70194;70195;70196;70197;70198;70199;70200;70201;70202 55759;55760;55761;55762;55763;55764;55765;55766;55767;55768;55769;55770;55771;55772;55773 55761 15 DMIHIADTK Unmodified 1042.5117 0.51173046 5084 Q9Y262 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 42.609 42.822 2 0.012714 47939 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 60.892 44.381 56907000 0 0 0 0 3533200 0 2845100 3970900 0 6547500 9008600 0 7524400 7163700 16314000 8365 5084 7636 70203;70204;70205;70206;70207;70208;70209;70210 55774;55775;55776;55777 55777 3 DMIHIADTK Oxidation (M) 1058.5066 0.50664508 5084 Q9Y262 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 0 1 0 By matching By MS/MS 2 0 2 1 1 29.569 24.535 2 0.019302 32253 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.233 45.529 53017000 8966100 44050000 0 0 0 0 0 0 0 0 0 0 0 0 0 8366 5084 7636 70211;70212 55778 55778 6471 1 DMIILPEMVGSMVGVYNGK 3 Oxidation (M) 2099.9941 0.99413463 1915 P62841 RPS15 40S ribosomal protein S15 yes yes 0 3 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 81.356 81.497 2 2.3345E-08 94041 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.494 66.932 65853000 0 0 0 0 0 7301300 2971000 4931200 0 0 11218000 12219000 8677400 7151300 11384000 8367 1915 7637 70213;70214;70215;70216;70217;70218;70219;70220 55779;55780;55781;55782;55783;55784;55785 55780 3092;3093;3094 7 DMILNFAEQNSFK Oxidation (M) 1571.729 0.72899346 433 O60825 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.845 79.904 2 2.7968E-17 92524 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 138.25 121.62 232700000 0 0 0 11136000 21397000 24364000 17362000 18478000 20929000 25893000 21831000 22142000 14503000 14492000 20175000 8368 433 7638 70221;70222;70223;70224;70225;70226;70227;70228;70229;70230;70231;70232 55786;55787;55788;55789;55790;55791;55792;55793;55794;55795;55796;55797 55791 554 11 DMILQFISR Oxidation (M) 1137.5852 0.58522975 1630 P50570 DNM2 Dynamin-2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.224 81.284 2 0.0018509 93850 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 136.75 93.506 329210000 0 0 0 12312000 13145000 36832000 22339000 18373000 21095000 39478000 27729000 30274000 24802000 33998000 48832000 8369 1630 7639 70233;70234;70235;70236;70237;70238;70239;70240;70241;70242;70243;70244 55798;55799;55800;55801;55802;55803;55804;55805;55806;55807;55808;55809;55810;55811;55812 55802 2616 15 DMILQFISR Unmodified 1121.5903 0.59031513 1630 P50570 DNM2 Dynamin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 88.783 88.922 2 0.0037238 102897 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 101.43 68.59 18755000 0 0 0 0 0 1856800 835560 1172100 754700 1651600 1098600 1060400 711060 1897900 7716200 8370 1630 7639 70245;70246;70247;70248;70249;70250;70251;70252;70253;70254 55813;55814;55815;55816;55817;55818;55819 55816 7 DMIPTEMQR Unmodified 1119.5053 0.50526487 3679 Q92888 ARHGEF1 Rho guanine nucleotide exchange factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 52.041 52.344 2 0.023437 58183 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.059 38.532 46359000 0 0 0 0 0 4089800 3778700 3579100 0 5066400 5172700 4562400 4197800 3840500 12072000 8371 3679 7640 70255;70256;70257;70258;70259;70260;70261;70262;70263 55820;55821;55822;55823;55824 55821 5 DMIRWGEEK Unmodified 1162.5441 0.54409322 2500 Q15126 PMVK Phosphomevalonate kinase yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 22.933 18.945 2 0.044523 25036 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.302 33.713 7526600 0 7526600 0 0 0 0 0 0 0 0 0 0 0 0 0 8372 2500 7641 70264;70265 55825 55825 1 DMLANFR Unmodified 865.41162 0.41162248 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.698 61.797 2 0.023392 70558 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 87.627 55.116 275670000 0 0 0 57593000 12874000 16876000 9495500 54674000 7782200 14361000 24031000 20878000 27193000 14591000 15323000 8373 1029 7642 70266;70267;70268;70269;70270;70271;70272;70273;70274;70275;70276;70277 55826;55827 55826 2 DMLANFR Oxidation (M) 881.40654 0.40653711 1029 P15924 DSP Desmoplakin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 39.573 39.813 2 0.020209 45354 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 74.517 56.955 218910000 0 0 0 50893000 0 11321000 13394000 45723000 8755400 13717000 14863000 20089000 21990000 10885000 7277800 8374 1029 7642 70278;70279;70280;70281;70282;70283;70284;70285;70286;70287;70288 55828;55829 55829 1427 2 DMLANFRGSEK Unmodified 1266.6027 0.60267073 1029 P15924 DSP Desmoplakin yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS 8 3.46 1 3 1 1 1 1 53.662 51.503 3 0.0028866 58140 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 61.833 53.346 41041000 7481400 0 0 11159000 0 3694500 0 18706000 0 0 0 0 0 0 0 8375 1029 7643 70289;70290;70291;70292 55830;55831;55832 55831 3 DMLEAGILDTYLGK Oxidation (M) 1553.7647 0.76471026 1641 P50990 CCT8 T-complex protein 1 subunit theta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.77 5 2 11 3 3 1 1 1 1 1 1 1 1 1 1 1 1 89.509 87.766 2;3 2.3118E-24 109108 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 132.76 114.45 1928300000 120650000 1475400000 27846000 3299300 7960300 19768000 10741000 16000000 11936000 39669000 36819000 25983000 0 27428000 104830000 8376 1641 7644 70293;70294;70295;70296;70297;70298;70299;70300;70301;70302;70303;70304;70305;70306;70307;70308;70309;70310 55833;55834;55835;55836;55837;55838;55839;55840;55841;55842;55843;55844;55845;55846;55847;55848;55849;55850;55851;55852;55853 55844 2631 20 DMLEAGILDTYLGK Unmodified 1537.7698 0.76979564 1641 P50990 CCT8 T-complex protein 1 subunit theta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS 6.55 3.8 3 2 6 2 2 1 1 1 1 1 1 1 94.365 92.418 2 4.7701E-18 114443 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 143.79 125.48 1521300000 200800000 1295600000 8338500 0 0 910320 0 768840 0 2138000 1620800 0 0 1187800 9914200 8377 1641 7644 70311;70312;70313;70314;70315;70316;70317;70318;70319;70320;70321 55854;55855;55856;55857;55858;55859;55860;55861 55860 7 DMLEFPAQELRK Unmodified 1475.7442 0.74424959 136 O00267 SUPT5H Transcription elongation factor SPT5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 4 10 2 1 1 1 1 1 1 1 1 1 1 1 1 77.079 75.421 3 0.00047046 94406 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.001 77.563 119980000 18701000 34293000 7417500 1770900 1380000 7030000 0 5211800 0 4996600 3994900 4154500 3561200 5849100 21624000 8378 136 7645 70322;70323;70324;70325;70326;70327;70328;70329;70330;70331;70332;70333;70334;70335 55862;55863;55864;55865;55866;55867;55868;55869;55870;55871;55872 55864 11 DMLEFPAQELRK Oxidation (M) 1491.7392 0.73916421 136 O00267 SUPT5H Transcription elongation factor SPT5 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 2 5 2 1 1 1 1 1 66.109 65.163 2;3 0.00043206 80904 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 84.506 72.146 97239000 0 0 20908000 0 9403700 0 0 11450000 0 0 15016000 0 0 16903000 23559000 8379 136 7645 70336;70337;70338;70339;70340;70341;70342 55873;55874;55875;55876;55877;55878 55875 182 4 DMLFQVLALEEPNVR Oxidation (M) 1788.908 0.90802046 1352 P35270 SPR Sepiapterin reductase yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 92.676 92.772 2 5.8815E-19 107765 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 107.18 98.221 16528000 0 0 0 0 998200 0 0 0 1182200 4641700 3026800 0 0 1726400 4952900 8380 1352 7646 70343;70344;70345;70346;70347;70348;70349 55879;55880;55881;55882;55883;55884 55880 2055 6 DMLGSLR Unmodified 790.40072 0.40072345 4383 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 52.996 53.375 2 0.018259 59896 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 118.69 85.757 105870000 0 0 0 0 0 12755000 0 1932000 0 0 26906000 22841000 14238000 0 27201000 8381 4383 7647 70350;70351;70352;70353;70354;70355;70356 55885;55886;55887;55888;55889;55890 55890 6 DMLLELEEQLAESRRQYEEK Oxidation (M) 2524.2115 0.21153228 2661 Q32MZ4 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 yes yes 0 1 2 By MS/MS 2 0 2 2 89.244 81.114 3;4 4.6548E-09 105434 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.146 72.483 33607000 33607000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8382 2661 7648 70357;70358 55891;55892;55893 55893 4331 3 DMLLELEEQLAESRRQYEEK Unmodified 2508.2166 0.21661766 2661 Q32MZ4 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 yes yes 0 0 2 By MS/MS 2 0 2 2 96.913 88.783 3;4 8.7768E-12 114632 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.684 86.232 231760000 231760000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8383 2661 7648 70359;70360 55894;55895 55894 1 DMLMEGTEEVEAELPDSR 2 Oxidation (M) 2081.8769 0.87691584 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 2 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 2 1 1 1 1 1 2 1 74.714 74.742 2 3.3127E-38 86212 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 130.07 117.3 48164000 0 0 0 3108300 4542800 0 4554900 4999400 0 6472400 7599100 7849900 5365200 3672100 0 8384 2556 7649 70361;70362;70363;70364;70365;70366;70367;70368;70369;70370;70371 55896;55897;55898;55899;55900;55901;55902 55898 4192;4193 7 DMLTDEITK Oxidation (M) 1080.5009 0.500891 2823 Q5VW36 FOCAD Focadhesin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 45.708 45.723 2 0.0047876 51321 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 72.879 37.261 47331000 0 0 0 5439400 4653700 8831700 6248300 0 3990100 8277400 4893700 0 4996900 0 0 8385 2823 7650 70372;70373;70374;70375;70376;70377;70378;70379 55903;55904;55905 55903 4460 2 DMMDPVAVCK 2 Oxidation (M) 1196.4876 0.4875659 2897 Q6NUJ1 PSAPL1 Proactivator polypeptide-like 1;Saposin A-like;Saposin B-Val-like;Saposin B-like;Saposin C-like;Saposin D-like yes yes 0 2 0 By MS/MS 10 0 1 1 30.334 30.021 2 0.003755 32862 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 53.968 46.297 2931000 0 0 0 2931000 0 0 0 0 0 0 0 0 0 0 0 8386 2897 7651 70380 55906 55906 4535;4536 1 DMNLTGCLESGGSEEPGGIGVGEK Oxidation (M) 2408.0472 0.047169066 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 1 0 By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 17 1 1 2 1 2 2 2 1 1 1 1 2 70.552 70.653 2;3 2.6031E-55 80767 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 112.8 100.82 86900000 0 0 0 2128600 4015200 8325500 4094600 8292400 8868000 15470000 5007500 6688000 5024100 3973300 15013000 8387 4285 7652 70381;70382;70383;70384;70385;70386;70387;70388;70389;70390;70391;70392;70393;70394;70395;70396;70397 55907;55908;55909;55910 55907 5742 4 DMNQFGEGEQAK Oxidation (M) 1368.5616 0.56159378 2033 Q00341 HDLBP Vigilin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 21.159 20.313 2 4.5834E-07 23850 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.02 105.53 48506000 8808100 9261300 0 0 3018900 4012400 3167700 0 0 4651400 0 0 4251100 5278200 6056600 8388 2033 7653 70398;70399;70400;70401;70402;70403;70404;70405;70406;70407 55911;55912;55913;55914;55915;55916;55917;55918;55919;55920 55914 3285 10 DMNQFGEGEQAK Unmodified 1352.5667 0.56667916 2033 Q00341 HDLBP Vigilin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 32.403 31.531 2 2.1132E-09 38110 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.65 115.43 89601000 7632500 24928000 0 0 0 7921100 0 5756800 3524400 8415300 6421300 0 5724800 6070700 13205000 8389 2033 7653 70408;70409;70410;70411;70412;70413;70414;70415;70416;70417;70418 55921;55922;55923;55924;55925;55926;55927;55928;55929;55930;55931;55932 55923 12 DMNQVLDAYENK Unmodified 1438.6398 0.6398441 1155 P23381 WARS Tryptophan--tRNA ligase, cytoplasmic;T1-TrpRS;T2-TrpRS yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 71.307 71.438 2 0.00084886 82068 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.632 60.04 63253000 0 0 0 0 2478600 4968400 1909700 4110900 0 4075700 5842400 9792000 5019400 8207600 16848000 8390 1155 7654 70419;70420;70421;70422;70423;70424;70425;70426;70427;70428 55933;55934;55935;55936;55937;55938;55939;55940;55941;55942 55941 10 DMPSIPVLNAAK Unmodified 1254.6642 0.66420836 2164 Q08AD1 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 82.121 82.157 2 0.0080321 95107 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 49.418 41.747 29916000 0 0 0 1613200 2045900 3837300 2976400 3131400 2255800 0 6727500 4505100 2822800 0 0 8391 2164 7655 70429;70430;70431;70432;70433;70434;70435;70436;70437 55943;55944;55945 55943 3 DMPVVTAEPEPK Unmodified 1311.6381 0.63805318 1279 P30414 NKTR NK-tumor recognition protein;Putative peptidyl-prolyl cis-trans isomerase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 53.209 53.398 2 0.047306 60400 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 42.336 35.6 46090000 0 0 0 0 2062800 10650000 2098600 0 0 0 0 13122000 0 4296200 13860000 8392 1279 7656 70438;70439;70440;70441;70442;70443 55946 55946 1 DMPYQPFSK Unmodified 1111.5008 0.50083142 278 O15371 EIF3D Eukaryotic translation initiation factor 3 subunit D yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 60.006 60.178 2 0.027124 67837 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 49.536 37.329 34061000 0 0 0 0 0 5444700 3778500 0 2614800 2792400 7369400 0 5857900 6203700 0 8393 278 7657 70444;70445;70446;70447;70448;70449;70450 55947 55947 1 DMQGLSLDAASQPSK Oxidation (M) 1562.7246 0.72463636 3826 Q96EY5 MVB12A Multivesicular body subunit 12A yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 47.865 47.968 2 0.00083487 54038 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 57.106 33.017 39446000 0 0 0 3087500 3071100 0 4118500 0 0 4845300 5968300 0 5764800 4565600 8025300 8394 3826 7658 70451;70452;70453;70454;70455;70456;70457;70458 55948;55949;55950;55951;55952 55948 5349 5 DMQGLSLDAASQPSK Unmodified 1546.7297 0.72972174 3826 Q96EY5 MVB12A Multivesicular body subunit 12A yes yes 0 0 0 By MS/MS 10 0 1 1 59.974 60.56 2 0.0013138 68308 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.196 40.379 6561500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6561500 8395 3826 7658 70459 55953 55953 1 DMQPSMESDMALVK Unmodified 1580.6885 0.68845055 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 74.496 74.143 2 0.00054619 85092 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.385 61.144 885900000 0 802850000 0 3335800 4116700 4409300 2809600 0 2920300 9114900 9758800 9014800 5170400 9068800 23338000 8396 1226 7659 70460;70461;70462;70463;70464;70465;70466;70467;70468;70469;70470;70471;70472 55954;55955;55956;55957;55958;55959;55960;55961;55962;55963;55964 55959 11 DMQPSMESDMALVK 2 Oxidation (M) 1612.6783 0.67827979 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 2 0 By MS/MS 2 0 1 1 53.394 47.602 2 0.007628 61760 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.255 49.091 9736600 0 9736600 0 0 0 0 0 0 0 0 0 0 0 0 0 8397 1226 7659 70473 55965 55965 1804;1805;1806 1 DMQPSMESDMALVK Oxidation (M) 1596.6834 0.68336517 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 1 0 By MS/MS 2 0 2 2 66.632 60.831 2 0.00099666 83665 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.313 84.185 88525000 0 88525000 0 0 0 0 0 0 0 0 0 0 0 0 0 8398 1226 7659 70474;70475 55966;55967 55967 1804;1805;1806 2 DMQPSMESDMALVK 3 Oxidation (M) 1628.6732 0.67319442 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 3 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 35.036 35.198 2 0.0022321 38337 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 49.189 45.426 24657000 0 0 0 0 3072400 0 4224000 2363600 0 5057700 0 5559000 0 4380600 0 8399 1226 7659 70476;70477;70478;70479;70480;70481 55968 55968 1804;1805;1806 1 DMRQTVAVGVIK Oxidation (M) 1331.7231 0.72312022 1960 P68104;Q5VTE0;Q05639 EEF1A1;EEF1A1P5;EEF1A2 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 2 yes no 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 18 1 1 2 2 1 2 1 2 2 2 1 1 44.246 44.462 2;3 0.0005519 49589 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 66.498 55.285 1626600000 0 0 0 29398000 24107000 167090000 259470000 30698000 217070000 28394000 262110000 338140000 180700000 37374000 52003000 8400 1960 7660 70482;70483;70484;70485;70486;70487;70488;70489;70490;70491;70492;70493;70494;70495;70496;70497;70498;70499 55969;55970;55971;55972;55973;55974;55975;55976;55977;55978;55979;55980;55981;55982 55980 3145 11 DMRQTVAVGVIK Unmodified 1315.7282 0.7282056 1960 P68104;Q5VTE0;Q05639 EEF1A1;EEF1A1P5;EEF1A2 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 2 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 57.762 56.658 3 0.0026171 64004 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 59.155 41.416 93919000 5500700 0 0 10105000 8034000 8428500 16832000 18027000 16631000 10361000 0 0 0 0 0 8401 1960 7660 70500;70501;70502;70503;70504;70505;70506;70507 55983;55984;55985;55986;55987;55988;55989;55990 55985 7 DMSALVAAR Unmodified 932.47495 0.47495102 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 53.102 53.533 2 0.017618 59593 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.531 35.894 28095000 0 0 0 0 0 0 0 0 0 0 0 0 0 10713000 17382000 8402 1201 7661 70508;70509;70510;70511 55991;55992;55993 55992 3 DMSGHYQNALYLGDVSER Oxidation (M) 2069.9113 0.91126793 1721 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 65.437 65.772 3 0.00017143 74411 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 52.045 47.428 56003000 0 0 0 0 0 0 0 0 0 0 0 15716000 12507000 9506000 18274000 8403 1721 7662 70512;70513;70514;70515 55994;55995;55996;55997;55998 55996 2797 5 DMSIIQWK Oxidation (M) 1035.5059 0.5059168 4505 Q9HC35 EML4 Echinoderm microtubule-associated protein-like 4 yes yes 0 1 0 By MS/MS 2 0 1 1 70.141 64.272 2 0.016331 81894 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.029 71.735 26521000 0 26521000 0 0 0 0 0 0 0 0 0 0 0 0 0 8404 4505 7663 70516 55999;56000 56000 5937 2 DMSIIQWK Unmodified 1019.511 0.51100218 4505 Q9HC35 EML4 Echinoderm microtubule-associated protein-like 4 yes yes 0 0 0 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 77.974 78.116 2 0.0079077 89740 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.029 57.417 13434000 0 0 0 0 0 0 0 0 0 2344400 0 0 1764100 2457000 6868300 8405 4505 7663 70517;70518;70519;70520 56001 56001 1 DMSLINPSSSLK Unmodified 1290.649 0.64895222 2785 Q5T7W7 TSTD2 Thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 76.415 71.578 2 5.136E-10 89408 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145.89 70.507 26299000 0 26299000 0 0 0 0 0 0 0 0 0 0 0 0 0 8406 2785 7664 70521 56002 56002 1 DMSMLEER Unmodified 1009.4209 0.42086654 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 48.035 48.207 2 0.014414 54165 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 70.525 60.887 60388000 0 0 0 3316900 2407100 0 3661600 4385100 3037500 6305900 7426800 10077000 4580200 7456900 7733600 8407 2361 7665 70522;70523;70524;70525;70526;70527;70528;70529;70530;70531;70532 56003;56004;56005 56003 3 DMSPLSETEMALGK 2 Oxidation (M) 1539.6797 0.67966 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.24 3.16 2 3 16 1 4 1 1 1 2 1 1 2 2 2 2 1 71.801 70.884 2 5.0411E-05 81595 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 82.171 67.027 245100000 290000 120900000 0 0 9217400 4335400 5684900 8723800 4997000 6725400 22409000 26086000 14064000 13672000 7997000 8408 1226 7666 70533;70534;70535;70536;70537;70538;70539;70540;70541;70542;70543;70544;70545;70546;70547;70548;70549;70550;70551;70552;70553 56006;56007;56008;56009;56010;56011;56012;56013;56014;56015;56016;56017;56018;56019;56020;56021;56022;56023;56024;56025 56008 1807;1808 20 DMSPLSETEMALGK Unmodified 1507.6898 0.68983076 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 81.313 80.872 2 1.8841E-18 98686 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 149.33 142.2 520600000 0 469140000 0 0 2116000 0 0 4246900 0 5212200 6161400 5264500 2666300 6239500 19552000 8409 1226 7666 70554;70555;70556;70557;70558;70559;70560;70561;70562;70563 56026;56027;56028;56029;56030;56031;56032;56033;56034;56035 56027 10 DMSPLSETEMALGK Oxidation (M) 1523.6847 0.68474538 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 4 1 1 1 1 1 1 1 1 1 1 77.476 75.231 2 4.6407E-20 86266 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 121.9 116.57 557280000 0 525510000 0 3704700 5374500 0 0 6548100 0 0 0 0 0 0 16147000 8410 1226 7666 70564;70565;70566;70567;70568;70569;70570;70571;70572;70573;70574;70575;70576;70577 56036;56037;56038;56039;56040;56041;56042;56043;56044;56045;56046;56047;56048;56049 56044 1807;1808 13 DMTEFFTDLITK Unmodified 1459.6905 0.69048269 3024 Q70CQ2 USP34 Ubiquitin carboxyl-terminal hydrolase 34 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 5 2 2 1 97.568 95.022 2 0.00084028 118680 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 106.29 86.504 19615000 8868700 8985000 1761100 0 0 0 0 0 0 0 0 0 0 0 0 8411 3024 7667 70578;70579;70580;70581;70582 56050;56051;56052 56052 3 DMTGLPHNRK Oxidation (M) 1183.5768 0.57679033 1691 P52594 AGFG1 Arf-GAP domain and FG repeat-containing protein 1 yes yes 0 1 1 By matching By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 7.477 7.4963 3 0.003016 4541 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 52.579 42.924 24377000 0 0 0 3131700 2585900 4303800 0 0 0 0 0 6271500 0 8084400 0 8412 1691 7668 70583;70584;70585;70586;70587 56053 56053 2734 1 DMTLEGDDLILEIE Oxidation (M) 1620.744 0.7440344 951 P11498 PC Pyruvate carboxylase, mitochondrial yes yes 0 1 0 By MS/MS 1 0 1 1 105.34 106.23 2 0.0010338 98045 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 91.087 84.704 6908400 0 6908400 0 0 0 0 0 0 0 0 0 0 0 0 0 8413 951 7669 70588 56054 56054 1228 1 DMTLPPETNVILTK Oxidation (M) 1586.8226 0.82255949 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 75.801 75.858 2 8.1279E-06 86798 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 89.266 78.611 201600000 0 0 0 11152000 15478000 16696000 20215000 11407000 13462000 0 29524000 35629000 0 18270000 29762000 8414 1226 7670 70589;70590;70591;70592;70593;70594;70595;70596;70597;70598 56055;56056;56057;56058;56059;56060;56061;56062;56063;56064 56061 1809 10 DMTLPPETNVILTK Unmodified 1570.8276 0.82764487 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.794 82.857 2 0.0013852 95347 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.781 66.653 113010000 0 0 0 1637700 3815200 4986200 2956400 6026900 3138400 8246100 10231000 10583000 8974100 15753000 36659000 8415 1226 7670 70599;70600;70601;70602;70603;70604;70605;70606;70607;70608;70609;70610 56065;56066;56067;56068;56069;56070;56071;56072;56073;56074;56075;56076 56068 11 DMTMFVTASK Oxidation (M) 1145.5097 0.50968155 2273 Q13347 EIF3I Eukaryotic translation initiation factor 3 subunit I yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 2 2 1 1 1 2 1 2 2 2 52.342 52.627 2 0.0031454 51969 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 71.614 53.628 82613000 0 0 0 0 0 6071900 8208100 3270600 3258000 5171600 11296000 10397000 10195000 10201000 14544000 8416 2273 7671 70611;70612;70613;70614;70615;70616;70617;70618;70619;70620;70621;70622;70623;70624;70625;70626;70627 56077;56078;56079;56080;56081;56082;56083;56084;56085;56086;56087;56088;56089;56090;56091;56092 56087 3703;3704 16 DMTMFVTASK Unmodified 1129.5148 0.51476693 2273 Q13347 EIF3I Eukaryotic translation initiation factor 3 subunit I yes yes 0 0 0 By MS/MS 10 0 1 1 67.319 67.456 2 0.044293 77704 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 53.756 25.334 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8417 2273 7671 70628 56093 56093 1 DMTSEQLDDILK Oxidation (M) 1422.6548 0.65482546 792 P05023 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.816 74.885 2 7.9744E-05 86449 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 87.298 67.511 51022000 0 0 0 3004200 3741700 0 3559300 3533900 4267200 4763300 4502400 7917600 5944500 4541100 5246800 8418 792 7672 70629;70630;70631;70632;70633;70634;70635;70636;70637;70638;70639;70640 56094;56095;56096;56097;56098;56099;56100;56101;56102;56103 56098 955 10 DMVAAMEQEQAEEALK Unmodified 1791.8019 0.8019004 3708 Q93073 SECISBP2L Selenocysteine insertion sequence-binding protein 2-like yes yes 0 0 0 By MS/MS 2 0 1 1 79.362 74.626 2 0.00087614 92960 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.045 46.61 17735000 0 17735000 0 0 0 0 0 0 0 0 0 0 0 0 0 8419 3708 7673 70641 56104 56104 0 DMVDPVTGDK Oxidation (M) 1091.4805 0.48048991 5133 Q9Y314 NOSIP Nitric oxide synthase-interacting protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 9 2.83 1 8 1 1 1 1 1 1 1 1 1 23.394 23.58 2 0.0077178 24297 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 53.751 42.53 65445000 0 0 0 5764100 5770100 6686100 0 0 0 9274900 9514300 11683000 7901000 8852400 0 8420 5133 7674 70642;70643;70644;70645;70646;70647;70648;70649;70650 56105;56106;56107;56108;56109;56110 56108 6522 6 DMVDPVTGDK Unmodified 1075.4856 0.48557529 5133 Q9Y314 NOSIP Nitric oxide synthase-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 39.147 39.418 2 0.03698 43535 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 40.994 23.008 101360000 0 0 0 8623300 0 10888000 0 10386000 0 11338000 14069000 11426000 9117600 8865300 16646000 8421 5133 7674 70651;70652;70653;70654;70655;70656;70657;70658;70659 56111 56111 1 DMVGIAQTGSGK Oxidation (M) 1178.5601 0.56013721 3670 Q92841 DDX17 Probable ATP-dependent RNA helicase DDX17 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.211 23.416 2 4.4604E-20 24038 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 160.77 147.08 184080000 0 0 0 10220000 9032000 9668800 11833000 10759000 6403700 17766000 14971000 27811000 26737000 15498000 23375000 8422 3670 7675 70660;70661;70662;70663;70664;70665;70666;70667;70668;70669;70670;70671 56112;56113;56114;56115;56116;56117;56118;56119;56120;56121 56119 5204 10 DMVGIAQTGSGK Unmodified 1162.5652 0.56522259 3670 Q92841 DDX17 Probable ATP-dependent RNA helicase DDX17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 38.941 39.232 2 8.3613E-11 43148 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 147.78 131.01 223340000 0 0 0 0 0 21478000 19182000 21142000 12693000 30574000 0 42374000 0 26482000 49419000 8423 3670 7675 70672;70673;70674;70675;70676;70677;70678;70679 56122;56123;56124;56125;56126;56127;56128;56129;56130;56131;56132;56133 56133 12 DMVQDLLDFK Oxidation (M) 1238.5853 0.58528933 2331 Q13619 CUL4A Cullin-4A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.22 2.2 1 8 1 1 1 1 1 1 1 1 1 83.327 82.987 2 0.0045331 96224 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 63.816 44.03 56639000 0 16679000 0 0 2246400 5890800 2220200 0 4118400 5741100 0 0 6967300 0 12776000 8424 2331 7676 70680;70681;70682;70683;70684;70685;70686;70687;70688 56134;56135;56136;56137;56138;56139;56140;56141 56135 3800 7 DMVQDLLDFK Unmodified 1222.5904 0.59037471 2331 Q13619 CUL4A Cullin-4A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 96.055 90.906 2 0.0053397 113971 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.033 84.385 480470000 209310000 269560000 1611200 0 0 0 0 0 0 0 0 0 0 0 0 8425 2331 7676 70689;70690;70691 56142;56143 56142 2 DMVVDIQR Unmodified 974.48552 0.48551571 5087 Q9Y266 NUDC Nuclear migration protein nudC yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 51.53 51.6 2 0.013039 58261 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 73.26 43.093 55455000 0 0 0 4778100 0 17011000 6702800 0 0 9069700 0 0 0 0 17893000 8426 5087 7677 70692;70693;70694;70695;70696 56144;56145;56146 56145 3 DMVVDIQRR Unmodified 1130.5866 0.58662674 5087 Q9Y266 NUDC Nuclear migration protein nudC yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 42.54 43.14 2 0.023803 47965 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 124.98 91.433 35030000 0 0 0 0 0 0 0 0 0 0 10489000 0 0 0 24541000 8427 5087 7678 70697;70698 56147;56148 56148 2 DMYEQFQNIMK 2 Oxidation (M) 1477.6218 0.62175119 1826 P61011 SRP54 Signal recognition particle 54 kDa protein yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 52.772 52.878 2 0.00016676 59598 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 82.75 76.082 53124000 0 0 0 0 6488400 7768600 8021200 9203400 5644300 0 5659300 0 5598900 4740300 0 8428 1826 7679 70699;70700;70701;70702;70703;70704;70705;70706 56149;56150;56151;56152;56153;56154;56155;56156;56157 56149 2960;2961 9 DMYEQFQNIMK Oxidation (M) 1461.6268 0.62683657 1826 P61011 SRP54 Signal recognition particle 54 kDa protein yes yes 0 1 0 By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 2 1 1 1 1 1 2 70.471 70.684 2 0.00038522 79086 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.438 69.915 42750000 0 0 0 0 0 2833500 2485000 2461400 0 2441600 2728900 5591200 7851500 1521300 14836000 8429 1826 7679 70707;70708;70709;70710;70711;70712;70713;70714;70715;70716;70717 56158;56159;56160 56158 2960;2961 3 DMYEQFQNIMK Unmodified 1445.6319 0.63192195 1826 P61011 SRP54 Signal recognition particle 54 kDa protein yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 83.807 83.998 2 0.00056726 96957 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 97.635 90.485 14247000 0 0 0 0 0 0 0 4996900 0 0 0 0 0 0 9250100 8430 1826 7679 70718;70719 56161;56162 56161 2 DMYGDDLEAR Unmodified 1183.4816 0.48155254 2320 Q13573 SNW1 SNW domain-containing protein 1 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 44.121 44.517 2 0.011956 50055 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 53.327 47.014 18548000 0 0 0 0 0 9309800 0 0 0 0 0 0 0 0 9237700 8431 2320 7680 70720;70721 56163;56164 56164 2 DMYGDDLEAR Oxidation (M) 1199.4765 0.47646716 2320 Q13573 SNW1 SNW domain-containing protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 34.872 34.993 2 0.0093754 38279 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 50.805 47.798 31422000 0 0 0 0 4230400 0 6196100 0 11052000 0 0 9943300 0 0 0 8432 2320 7680 70722;70723;70724;70725 56165;56166;56167 56166 3783 2 DMYGDDLEARIK Unmodified 1424.6606 0.66057954 2320 Q13573 SNW1 SNW domain-containing protein 1 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 64.797 59.465 3 0.0042617 76235 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.563 59.186 22559000 0 22559000 0 0 0 0 0 0 0 0 0 0 0 0 0 8433 2320 7681 70726;70727 56168 56168 1 DMYGDDLEARIK Oxidation (M) 1440.6555 0.65549416 2320 Q13573 SNW1 SNW domain-containing protein 1 yes yes 0 1 1 By MS/MS 2.5 0.5 1 1 2 57.362 52.02 3 0.018799 64201 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 45.829 40.109 58369000 0 58369000 0 0 0 0 0 0 0 0 0 0 0 0 0 8434 2320 7681 70728;70729 56169;56170 56170 3783 1 DMYLIPLGATDK Oxidation (M) 1351.6694 0.66935331 3631 Q92576 PHF3 PHD finger protein 3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 78.016 78.14 2 0.0067217 89897 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 69.672 67.517 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8435 3631 7682 70730;70731;70732;70733 56171;56172;56173;56174 56172 5125 4 DMYLIPLGATDK Unmodified 1335.6744 0.67443869 3631 Q92576 PHF3 PHD finger protein 3 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 84.638 84.751 2 0.00039354 97868 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.763 52.365 54911000 0 0 0 0 3060600 0 3933200 4922700 4088700 4108900 5720900 6317400 4117700 5590600 13051000 8436 3631 7682 70734;70735;70736;70737;70738;70739;70740;70741;70742;70743;70744 56175;56176;56177;56178;56179;56180;56181 56176 7 DMYNDTLNGSTEK Oxidation (M) 1502.6195 0.61950259 3949 Q96PU8 QKI Protein quaking yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.545 28.739 2 4.2975E-13 30590 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 134.75 124.46 101990000 0 0 0 5438400 5503600 8799300 8783500 8964800 6649400 11956000 9805600 12413000 8064500 6929000 8686600 8437 3949 7683 70745;70746;70747;70748;70749;70750;70751;70752;70753;70754;70755;70756 56182;56183;56184;56185;56186;56187;56188;56189;56190;56191;56192;56193;56194;56195;56196;56197 56187 5433 16 DMYNDTLNGSTEK Unmodified 1486.6246 0.62458797 3949 Q96PU8 QKI Protein quaking yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.92 40.099 2 1.1844E-15 44261 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 175.15 166.25 166760000 0 0 0 8952900 7857900 12165000 11823000 12592000 9851600 15228000 16686000 19601000 14301000 10412000 27294000 8438 3949 7683 70757;70758;70759;70760;70761;70762;70763;70764;70765;70766;70767;70768 56198;56199;56200;56201;56202;56203;56204;56205;56206;56207;56208;56209;56210 56208 13 DNAEAISGHSVEADPK Unmodified 1638.7485 0.74854293 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 8 3.28 1 2 8 3 1 1 1 1 1 1 1 1 31.758 30.717 2;3 1.6367E-66 38796 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 206.88 190.04 129860000 0 91535000 0 0 3989700 0 4068200 3521200 0 0 6823700 5389800 4146200 4685300 5704500 8439 3443 7684 70769;70770;70771;70772;70773;70774;70775;70776;70777;70778;70779 56211;56212;56213;56214;56215;56216;56217 56212 7 DNAEIRVHTVEDYQAIVDAEWNILYDK Unmodified 3218.552 0.55202195 4065 Q99832 CCT7 T-complex protein 1 subunit eta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 2 2 2 97.573 93.466 3;4 1.0098E-89 97099 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 134.2 131.92 296170000 237810000 44292000 14075000 0 0 0 0 0 0 0 0 0 0 0 0 8440 4065 7685 70780;70781;70782;70783;70784;70785 56218;56219;56220;56221;56222;56223;56224;56225 56220 8 DNAGAATEEFIK Unmodified 1264.5935 0.59354583 897 P09972 ALDOC Fructose-bisphosphate aldolase C yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 54.101 53.444 2 0.0060546 61189 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 52.278 35.502 4832500 0 0 0 4832500 0 0 0 0 0 0 0 0 0 0 0 8441 897 7686 70786;70787 56226;56227 56227 2 DNALLAQLIQDK Unmodified 1340.73 0.72997974 1857 P61764 STXBP1 Syntaxin-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 88.648 87.411 2 9.4599E-07 108456 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.43 102.64 406900000 7497300 339500000 3014700 0 0 7672100 2852400 3884600 1862200 9709000 5387900 3223000 2378400 4457800 15457000 8442 1857 7687 70788;70789;70790;70791;70792;70793;70794;70795;70796;70797;70798;70799;70800;70801 56228;56229;56230;56231;56232;56233;56234;56235;56236;56237;56238;56239;56240;56241;56242;56243 56232 15 DNALLSAIEESRK Unmodified 1444.7522 0.75217174 3311 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.46 3.15 5 21 1 2 2 2 1 1 2 2 2 1 2 2 2 2 2 77.426 76.616 2;3 1.9046E-11 88360 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 117.09 107.14 579820000 25030000 85898000 20433000 16170000 6907000 22212000 27321000 42538000 37765000 26862000 36848000 50176000 39378000 41237000 101050000 8443 3311 7688 70802;70803;70804;70805;70806;70807;70808;70809;70810;70811;70812;70813;70814;70815;70816;70817;70818;70819;70820;70821;70822;70823;70824;70825;70826;70827 56244;56245;56246;56247;56248;56249;56250;56251;56252;56253;56254;56255;56256;56257;56258;56259;56260 56254 6 DNALTLLIK Unmodified 999.59645 0.59644637 4387 Q9H3U1 UNC45A Protein unc-45 homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 84.039 84.104 2 0.0089221 96458 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 68.224 31.203 95791000 0 0 0 4566600 6016400 9720400 9094200 6095000 5369200 10981000 13125000 12263000 0 7145800 11415000 8444 4387 7689 70828;70829;70830;70831;70832;70833;70834;70835;70836;70837;70838 56261;56262;56263;56264;56265;56266;56267;56268;56269;56270 56268 10 DNAMLEYLK Unmodified 1095.527 0.52704617 1017 P15311 EZR Ezrin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.95 2.64 2 1 19 2 1 2 1 2 1 2 1 1 2 2 1 2 2 76.304 75.821 2 0.0082493 93202 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.657 52.419 2383700000 0 2166700000 19746000 7973900 3548600 3067900 6587800 9797000 3834600 0 33874000 27573000 5393800 22483000 73081000 8445 1017 7690 70839;70840;70841;70842;70843;70844;70845;70846;70847;70848;70849;70850;70851;70852;70853;70854;70855;70856;70857;70858;70859;70860 56271;56272;56273;56274;56275;56276;56277;56278;56279;56280;56281;56282;56283 56274 13 DNAMLEYLK Oxidation (M) 1111.522 0.52196079 1017 P15311 EZR Ezrin yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 56.636 49.639 2 0.0047672 64252 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.11 94.334 268490000 17139000 251350000 0 0 0 0 0 0 0 0 0 0 0 0 0 8446 1017 7690 70861;70862 56284 56284 1411 1 DNDFIYHDRVPDLK Unmodified 1745.8373 0.83729835 3549 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 71.991 66.139 4 0.029015 87213 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 39.005 32.842 66069000 60326000 0 5742800 0 0 0 0 0 0 0 0 0 0 0 0 8447 3549 7691 70863;70864 56285 56285 0 DNDFIYHEAVPALDTLQPVK Unmodified 2284.1376 0.1375627 4386 Q9H3S7 PTPN23 Tyrosine-protein phosphatase non-receptor type 23 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 91.131 87.447 3 0.00069334 105823 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 44.816 36.629 33027000 0 30248000 2778700 0 0 0 0 0 0 0 0 0 0 0 0 8448 4386 7692 70865;70866 56286;56287 56287 2 DNDLISLPK Unmodified 1013.5393 0.53932542 2530 Q15404 RSU1 Ras suppressor protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 69.275 69.345 2 0.031803 79566 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 47.603 33.446 30576000 0 0 0 1500400 1161300 3244800 1597600 1832200 0 2271000 3097900 4421800 2379700 3062300 6007000 8449 2530 7693 70867;70868;70869;70870;70871;70872;70873;70874;70875;70876;70877 56288 56288 1 DNDRTLQQQPGDQNR Unmodified 1783.8198 0.81975081 5063 Q9UPW5 AGTPBP1 Cytosolic carboxypeptidase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 8 1 1 1 1 1 1 1 1 15.059 15.34 3 0.0070869 14771 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 28.956 17.343 27412000 0 0 0 0 0 0 2907000 0 1410200 2984800 6156400 5678300 2646000 2427000 3202400 8450 5063 7694 70878;70879;70880;70881;70882;70883;70884;70885 56289;56290 56289 2 DNDVIQDSSSALHVSSK Unmodified 1800.849 0.84898525 3086 Q7Z3T8 ZFYVE16 Zinc finger FYVE domain-containing protein 16 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 59.883 53.582 3 2.0743E-07 68896 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.264 75.384 104230000 10829000 93401000 0 0 0 0 0 0 0 0 0 0 0 0 0 8451 3086 7695 70886;70887;70888 56291;56292;56293;56294 56291 4 DNEAIEFSFDLERDVPEDVAQEMVESGYVCEGDHK Unmodified 4057.747 0.74697088 4393 Q9H4A3 WNK1 Serine/threonine-protein kinase WNK1 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 97.753 91.931 4 2.5398E-06 116205 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.952 39.689 236130000 236130000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8452 4393 7696 70889;70890 56295;56296 56296 2 DNEDSILQR Unmodified 1088.5098 0.5098162 3520 Q8TEU7 RAPGEF6 Rap guanine nucleotide exchange factor 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 36.72 36.91 2 0.013257 41000 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 60.074 37.003 41131000 0 0 0 3552400 2683600 3931800 0 0 0 6346200 5486300 6283900 5593600 0 7253600 8453 3520 7697 70891;70892;70893;70894;70895;70896;70897;70898 56297;56298;56299;56300;56301 56297 5 DNEGSWFR Unmodified 1009.4254 0.42535829 4078 Q9BPW8 NIPSNAP1 Protein NipSnap homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 52.216 52.366 2 0.011381 58978 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 77.058 57.581 97740000 0 0 0 5079400 5381900 6525500 0 9444900 6191500 8384800 15633000 10494000 7595200 7337700 15673000 8454 4078 7698 70899;70900;70901;70902;70903;70904;70905;70906;70907;70908;70909 56302;56303;56304;56305;56306;56307;56308 56304 7 DNEIARLK Unmodified 957.52434 0.52434406 509 O75496 GMNN Geminin yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 31.568 27.51 2 0.035956 36043 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 142.64 81.885 67185000 0 62166000 5019700 0 0 0 0 0 0 0 0 0 0 0 0 8455 509 7699 70910;70911;70912 56309;56310 56309 0 DNELIGQTVR Unmodified 1143.5884 0.58840088 136 O00267 SUPT5H Transcription elongation factor SPT5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 45.565 45.777 2 0.012798 51462 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 59.426 10.632 60616000 0 0 0 0 4379800 0 4474700 0 0 8833200 8679800 0 8541300 9704900 16002000 8456 136 7700 70913;70914;70915;70916;70917;70918;70919 56311;56312;56313;56314 56311 4 DNELLPPPSPSLGSFDPLAELTGK Unmodified 2493.2639 0.26388542 2479 Q15025 TNIP1 TNFAIP3-interacting protein 1 yes yes 0 0 0 By MS/MS 3 0 1 1 99.318 95.967 3 0.00083649 115109 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 24.927 17.815 3608700 0 3608700 0 0 0 0 0 0 0 0 0 0 0 0 0 8457 2479 7701 70920 56315 56315 1 DNENVVNEYSSELEK Unmodified 1767.7799 0.77990263 758 P02675 FGB Fibrinogen beta chain;Fibrinopeptide B;Fibrinogen beta chain yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 69.192 69.077 2 4.0925E-14 79332 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 117.23 108.49 11166000 0 0 0 3721700 0 0 0 4832800 0 0 0 0 2611000 0 0 8458 758 7702 70921;70922;70923 56316;56317 56316 2 DNEQALYELVK Unmodified 1320.6561 0.65614609 3303 Q8N108 MIER1 Mesoderm induction early response protein 1 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching 10 0 8 1 1 1 1 1 1 1 1 77.672 77.762 2 0.00074428 89966 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 77.533 67.247 74014000 0 0 0 0 4595200 7070000 5635400 0 0 8290400 8957300 12347000 0 8236800 18882000 8459 3303 7703 70924;70925;70926;70927;70928;70929;70930;70931 56318;56319;56320 56318 2 DNETIPCTR Unmodified 1104.487 0.48697227 3134 Q86TC9 MYPN Myopalladin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 25.623 25.672 2 0.012243 27167 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 61.602 43.456 105880000 0 0 0 0 16491000 16510000 15465000 26797000 14222000 0 0 0 0 16396000 0 8460 3134 7704 70932;70933;70934;70935;70936;70937;70938 56321;56322;56323;56324;56325;56326 56324 5 DNETLAELK Unmodified 1031.5135 0.5135046 4746 Q9NYL9 TMOD3 Tropomodulin-3 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 43.966 44.275 2 0.041598 49704 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 61.679 25.799 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8461 4746 7705 70939;70940 56327;56328 56327 2 DNEVEQEDLAQSLSLVK Unmodified 1915.9375 0.93746591 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 84.165 83.861 2 8.3587E-38 97267 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 137.84 122.46 123740000 0 51142000 0 0 4618900 5520100 4286500 4351400 5548800 9664900 6456900 10719000 4223300 5313900 11896000 8462 2193 7706 70941;70942;70943;70944;70945;70946;70947;70948;70949;70950;70951;70952 56329;56330;56331;56332;56333;56334;56335;56336;56337;56338;56339;56340;56341 56329 13 DNEVLLQIDK Unmodified 1185.6241 0.62411768 4667 Q9NVG8 TBC1D13 TBC1 domain family member 13 yes yes 0 0 0 By MS/MS 2 0 1 1 73.328 67.783 2 0.017712 85636 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.228 58.988 57509000 0 57509000 0 0 0 0 0 0 0 0 0 0 0 0 0 8463 4667 7707 70953 56342 56342 1 DNEVNHALEQQEAK Unmodified 1623.7489 0.74887728 3134 Q86TC9 MYPN Myopalladin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 32.66 32.823 3 0.0012864 35870 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 41.378 34.161 47956000 0 0 0 0 5848000 9625600 4250800 0 0 7335500 0 7570600 6201500 7123800 0 8464 3134 7708 70954;70955;70956;70957;70958;70959;70960 56343;56344;56345;56346;56347;56348 56345 5 DNFADVQVSVVDCPDLTK Unmodified 2020.9412 0.94117108 4341 Q9H0W9 C11orf54 Ester hydrolase C11orf54 yes yes 0 0 0 By MS/MS 2 0 1 1 84.87 76.739 2 9.362E-56 100180 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 153.09 125.41 11901000 11901000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8465 4341 7709 70961 56349 56349 1 DNFDEMDTSR Unmodified 1228.4666 0.46663076 1152 P23258 TUBG1 Tubulin gamma-1 chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.382 35.564 2 0.0028825 39060 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 79.148 75.577 165860000 0 0 0 7536500 8029100 12252000 9090300 8636500 10303000 8994200 18183000 16507000 12539000 18746000 35039000 8466 1152 7710 70962;70963;70964;70965;70966;70967;70968;70969;70970;70971;70972;70973 56350;56351;56352;56353;56354;56355;56356;56357;56358;56359;56360 56354 11 DNFDEMDTSR Oxidation (M) 1244.4615 0.46154538 1152 P23258 TUBG1 Tubulin gamma-1 chain yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 18.528 18.746 2 0.0081887 18786 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 52.49 48.918 48742000 0 0 0 4271200 3575800 0 4506900 2884200 2636700 4640600 4501600 7063800 4908600 3329000 6423900 8467 1152 7710 70974;70975;70976;70977;70978;70979;70980;70981;70982;70983;70984 56361;56362;56363;56364;56365 56364 1659 4 DNFGFIETANHDK Unmodified 1506.6739 0.67392142 517 O75534 CSDE1 Cold shock domain-containing protein E1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.17 3.33 6 1 23 2 3 2 2 2 2 2 1 2 2 2 2 1 3 2 62.546 61.268 2;3 2.9755E-36 79022 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 181.4 176.79 512390000 57876000 183610000 21833000 10909000 9515500 13617000 11167000 10708000 10118000 21382000 29347000 31136000 12680000 27067000 61423000 8468 517 7711 70985;70986;70987;70988;70989;70990;70991;70992;70993;70994;70995;70996;70997;70998;70999;71000;71001;71002;71003;71004;71005;71006;71007;71008;71009;71010;71011;71012;71013;71014 56366;56367;56368;56369;56370;56371;56372;56373;56374;56375;56376;56377;56378;56379;56380;56381;56382;56383;56384;56385;56386 56373 18 DNFTLIPEGTNGTEER Unmodified 1791.8275 0.82752153 2613 Q16555 DPYSL2 Dihydropyrimidinase-related protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 74.13 73.571 2 0.00023459 84083 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 77.527 69.117 92382000 0 30904000 0 0 0 3240000 0 0 0 5700600 13153000 0 6526000 10137000 22721000 8469 2613 7712 71015;71016;71017;71018;71019;71020;71021;71022 56387;56388;56389;56390;56391;56392;56393;56394;56395 56393 9 DNFTLIPEGTNGTEERMSVIWDK Unmodified 2651.2537 0.25373144 2613 Q16555 DPYSL2 Dihydropyrimidinase-related protein 2 yes yes 0 0 1 By MS/MS 2 0 1 1 93.363 85.232 3 5.9377E-15 110395 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.755 80.858 11597000 11597000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8470 2613 7713 71023 56396 56396 1 DNGDLVLSSPSNVTLPQVK Unmodified 1982.032 0.032034995 775 P04150 NR3C1 Glucocorticoid receptor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.68 1.57 1 24 1 2 2 2 2 2 2 2 2 2 2 2 2 82.596 82.466 2;3 4.405E-38 95663 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 141.46 128.33 585740000 0 41580000 0 12142000 31947000 32329000 30872000 38386000 30317000 53839000 47727000 67737000 48314000 60284000 90262000 8471 775 7714 71024;71025;71026;71027;71028;71029;71030;71031;71032;71033;71034;71035;71036;71037;71038;71039;71040;71041;71042;71043;71044;71045;71046;71047;71048 56397;56398;56399;56400;56401;56402;56403;56404;56405;56406;56407;56408;56409;56410;56411;56412 56410 14 DNGDYPYFETSAK Unmodified 1505.6311 0.63105355 1648 P51151 RAB9A Ras-related protein Rab-9A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 57.601 57.72 2 4.3064E-09 65505 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 112.64 105.79 221960000 0 0 0 10682000 10223000 15610000 13463000 18536000 17880000 18486000 30928000 24862000 19039000 19031000 23216000 8472 1648 7715 71049;71050;71051;71052;71053;71054;71055;71056;71057;71058;71059;71060 56413;56414;56415;56416;56417;56418;56419;56420;56421;56422;56423;56424;56425;56426;56427;56428 56421 16 DNGEPVIYYLVK Unmodified 1408.7238 0.72383172 4517 Q9HCK8 CHD8 Chromodomain-helicase-DNA-binding protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 87.398 87.468 2 0.0026548 101478 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 72.325 64.4 50472000 0 0 0 2588600 3104400 3786300 2667600 4250200 3188100 6471900 4895600 5528600 3366200 3723000 6902000 8473 4517 7716 71061;71062;71063;71064;71065;71066;71067;71068;71069;71070;71071;71072 56429;56430;56431;56432;56433;56434 56431 6 DNGNGTYSCSYVPR Unmodified 1588.6576 0.65761943 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 2 1 1 1 42.438 42.615 2 0.00019423 46625 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 97.911 81.28 69491000 0 0 0 3378500 1997600 2817400 3157900 2096100 2398700 4854700 8986000 14105000 6579600 5965500 13154000 8474 1124 7717 71073;71074;71075;71076;71077;71078;71079;71080;71081;71082;71083;71084;71085 56435;56436;56437;56438;56439;56440;56441;56442;56443 56440 9 DNGNGTYSCSYVPRKPVK Unmodified 2040.9687 0.96872323 1124 P21333 FLNA Filamin-A yes yes 0 0 2 By MS/MS 2 0 1 1 41.897 35.162 3 4.1955E-09 48630 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.767 86.351 23022000 23022000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8475 1124 7718 71086 56444;56445 56445 2 DNGVVPVVK Unmodified 925.52328 0.52328142 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43.707 42.916 2 0.017618 47896 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.531 28.568 485580000 14743000 176440000 0 14050000 13571000 24588000 14001000 15597000 14739000 21567000 27350000 41050000 27829000 29688000 50367000 8476 4819 7719 71087;71088;71089;71090;71091;71092;71093;71094;71095;71096;71097;71098;71099;71100 56446;56447;56448;56449;56450;56451 56450 6 DNHGLTALDTVR Unmodified 1310.6579 0.65787742 3645 Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 51.602 51.505 3 0.0032762 58124 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 55.232 33.473 48102000 0 0 0 3688700 4238700 9036700 7381900 10346000 0 0 0 0 13410000 0 0 8477 3645 7720 71101;71102;71103;71104;71105;71106 56452;56453 56453 2 DNHLLGTFDLTGIPPAPR Unmodified 1933.0058 0.005760665 932 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 88.262 88.353 3 9.1601E-62 102498 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 137.61 131.63 66790000 0 0 0 0 1047600 2247600 0 0 3376500 10675000 6074000 4888200 0 2889900 35591000 8478 932 7721 71107;71108;71109;71110;71111;71112;71113;71114 56454;56455;56456;56457;56458;56459;56460;56461;56462;56463;56464;56465 56459 12 DNHNLIER Unmodified 1009.4941 0.49410656 1092;1090 P19532;O14948;P19484 TFE3;TFEC;TFEB Transcription factor E3;Transcription factor EC;Transcription factor EB no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 20.07 20.322 2 0.037979 19756 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 51.193 39.288 34215000 0 0 0 0 2794000 7029500 3508700 0 0 0 5730400 5526600 0 4060900 5564900 8479 1092;1090 7722 71115;71116;71117;71118;71119;71120;71121 56466;56467 56467 2 DNIAGEELELSK Unmodified 1316.646 0.64597533 457 O75128 COBL Protein cordon-bleu yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 60.405 60.705 2 0.0097862 68398 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 47.302 35.347 24808000 0 0 0 0 0 0 7666500 0 0 0 0 0 0 6544800 10596000 8480 457 7723 71122;71123;71124 56468;56469 56469 2 DNIFIDPGYQTFEQELNK Unmodified 2170.0219 0.021864239 4862 Q9UBW7 ZMYM2 Zinc finger MYM-type protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 94.314 89.417 2 0.00015252 110983 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.264 79.877 9018800 0 9018800 0 0 0 0 0 0 0 0 0 0 0 0 0 8481 4862 7724 71125 56470 56470 1 DNINIEEAAR Unmodified 1143.552 0.55201537 2337 Q13637 RAB32 Ras-related protein Rab-32 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 42.799 43.035 2 0.023293 48136 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 45.598 0 52090000 0 0 0 0 0 0 0 10637000 0 12054000 0 0 19108000 10290000 0 8482 2337 7725 71126;71127;71128;71129 56471;56472;56473;56474 56474 2 DNIQAMVIVPTR Oxidation (M) 1371.718 0.71803484 1199 P26196 DDX6 Probable ATP-dependent RNA helicase DDX6 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 62.152 62.369 2 0.0020347 71509 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 61.344 33.135 17341000 0 0 0 0 0 0 6290600 0 0 0 6690100 0 4360400 0 0 8483 1199 7726 71130;71131;71132;71133;71134;71135;71136 56475;56476;56477;56478;56479;56480;56481 56480 1744 7 DNIQAMVIVPTR Unmodified 1355.7231 0.72312022 1199 P26196 DDX6 Probable ATP-dependent RNA helicase DDX6 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 76.51 76.758 2 0.00086188 88172 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 104.79 81.366 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8484 1199 7726 71137;71138 56482;56483 56482 2 DNIQGITK Unmodified 887.47125 0.47124585 1910 P62805 HIST1H4A Histone H4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.904 24.109 2 0.016318 25022 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 67.464 30.37 423830000 0 0 0 46369000 23339000 33638000 25949000 22226000 23370000 42252000 35885000 46706000 38205000 33625000 52269000 8485 1910 7727 71139;71140;71141;71142;71143;71144;71145;71146;71147;71148;71149;71150 56484 56484 1 DNIQGITKPAIR Unmodified 1324.7463 0.7462985 1910 P62805 HIST1H4A Histone H4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 16 2 2 1 2 2 1 2 1 1 2 46.262 46.266 2;3 0.011301 52457 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 34.685 27.314 272300000 0 0 0 78685000 28331000 7513900 40125000 37325000 7542700 34377000 3850000 0 15492000 19060000 0 8486 1910 7728 71151;71152;71153;71154;71155;71156;71157;71158;71159;71160;71161;71162;71163;71164;71165;71166 56485;56486;56487 56487 2 DNIVEGIIR Unmodified 1027.5662 0.56620887 282 O15397 IPO8 Importin-8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 73.572 73.52 2 0.025904 84706 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 50.04 27.549 24278000 0 0 0 0 7394300 8709300 0 0 0 0 8174400 0 0 0 0 8487 282 7729 71167;71168;71169;71170;71171 56488;56489;56490;56491;56492 56490 5 DNKPEEEEQVIHEDDERPSEK Unmodified 2551.131 0.13103335 2986 Q6VMQ6 ATF7IP Activating transcription factor 7-interacting protein 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 33.839 33.24 4 8.0676E-12 35540 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.245 72.92 195710000 38733000 0 7365900 6022000 8061700 10692000 0 8649500 9801200 19134000 17404000 19417000 15786000 8884700 25757000 8488 2986 7730 71172;71173;71174;71175;71176;71177;71178;71179;71180;71181;71182;71183;71184 56493;56494;56495;56496;56497;56498;56499;56500;56501;56502 56495 10 DNLAEDIMR Unmodified 1075.4968 0.49680868 870 P08670 VIM Vimentin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.807 68.887 2 0.0031099 79050 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 133.86 117.66 378860000 0 0 0 18305000 20885000 28770000 23494000 24662000 14126000 31876000 36330000 50628000 33480000 39621000 56683000 8489 870 7731 71185;71186;71187;71188;71189;71190;71191;71192;71193;71194;71195;71196 56503;56504;56505;56506;56507;56508;56509;56510;56511;56512;56513;56514;56515;56516 56506 9 DNLAQQSFNMEQANYTIQSLK Unmodified 2442.1485 0.14853809 4784 Q9NZZ3 CHMP5 Charged multivesicular body protein 5 yes yes 0 0 0 By MS/MS 10 0 1 1 84.743 84.922 3 0.0070932 98031 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 26.064 18.531 8800000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8800000 8490 4784 7732 71197 56517 56517 1 DNLAQQSFNMEQANYTIQSLK Oxidation (M) 2458.1435 0.14345271 4784 Q9NZZ3 CHMP5 Charged multivesicular body protein 5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 78.179 78.172 3 9.6319E-05 90407 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 45.737 37.745 37826000 0 0 0 0 6501700 8240400 0 0 0 0 18048000 0 5035900 0 0 8491 4784 7732 71198;71199;71200;71201 56518 56518 6152 1 DNLEFFLAGIGR Unmodified 1350.6932 0.6932003 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS 10 0 1 1 95.118 95.265 2 0.0056245 110482 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.683 48.481 1328000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1328000 8492 1565 7733 71202 56519 56519 1 DNLEWLAR Unmodified 1015.5087 0.50869399 4011 Q99460 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 71.231 71.287 2 0.012173 81231 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.243 43.309 95635000 0 0 0 5472000 7145500 9073700 0 0 1274600 18897000 17562000 18586000 2325300 4162800 11136000 8493 4011 7734 71203;71204;71205;71206;71207;71208;71209;71210;71211;71212 56520;56521;56522;56523;56524;56525;56526 56522 7 DNLGMLVWSPNQNLSEAK Unmodified 2014.9782 0.97822529 4971 Q9UKL0 RCOR1 REST corepressor 1 yes yes 0 0 0 By MS/MS 10 0 1 1 87.134 87.293 2 0.00053721 100898 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.252 47.646 2193900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2193900 8494 4971 7735 71213 56527 56527 1 DNLHQVSK Unmodified 939.47739 0.47739386 4962 Q9UKD2 MRTO4 mRNA turnover protein 4 homolog yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 7.2631 6.5323 2 0.018645 7338 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.294 56.358 249380000 9513300 215070000 5960000 1381200 1376000 0 2126400 2302000 2586500 1095400 2095200 1112100 1445800 1234700 2079800 8495 4962 7736 71214;71215;71216;71217;71218;71219;71220;71221;71222;71223;71224;71225;71226;71227;71228 56528;56529;56530 56529 3 DNLIVPILEEEVQNSVSGESEA Unmodified 2370.1438 0.14382987 5144 Q9Y3A3 MOB4 MOB-like protein phocein yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 99.444 93.703 2;3 0.0074237 117929 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 19.897 14.369 23400000 14246000 9153700 0 0 0 0 0 0 0 0 0 0 0 0 0 8496 5144 7737 71229;71230 56531;56532 56532 2 DNLLLDMYLAPHVR Oxidation (M) 1684.8607 0.86067633 2232 Q13098 GPS1 COP9 signalosome complex subunit 1 yes yes 0 1 0 By matching By MS/MS 10 0 2 1 1 85.824 85.961 3 0.00037678 99322 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.306 54.758 6645300 0 0 0 0 0 0 0 0 0 1323300 0 0 0 0 5321900 8497 2232 7738 71231;71232 56533 56533 3627 1 DNLLNAWR Unmodified 1000.509 0.50902834 2104;2103;2105 Q04725;Q04724;Q04726;Q04727 TLE2;TLE1;TLE3;TLE4 Transducin-like enhancer protein 2;Transducin-like enhancer protein 1;Transducin-like enhancer protein 3;Transducin-like enhancer protein 4 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 73.909 73.963 2 0.0052859 84532 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.43 79.255 75294000 0 0 0 2688300 3200800 9102100 4176800 6289800 0 6289400 5553500 9024100 7510200 5969000 15490000 8498 2103;2104;2105 7739 71233;71234;71235;71236;71237;71238;71239;71240;71241;71242;71243 56534;56535;56536;56537;56538;56539;56540;56541;56542;56543;56544 56537 11 DNLPLQENVTIQK Unmodified 1510.7991 0.79912193 4043 Q99661 KIF2C Kinesin-like protein KIF2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.476 66.561 2 0.0010108 76119 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 82.803 56.946 394470000 0 0 0 18577000 23697000 33621000 33943000 22315000 25735000 32326000 43306000 44234000 32813000 33094000 50813000 8499 4043 7740 71244;71245;71246;71247;71248;71249;71250;71251;71252;71253;71254;71255 56545;56546;56547;56548;56549 56548 5 DNLQILR Unmodified 870.49232 0.49231565 4226;2895 Q6N069;Q9BXJ9 NAA16;NAA15 N-alpha-acetyltransferase 16, NatA auxiliary subunit;N-alpha-acetyltransferase 15, NatA auxiliary subunit no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 52.781 52.985 2 0.018505 59094 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 111.81 45.916 7191600000 0 0 0 30209000 0 78855000 351510000 469350000 370240000 1519600000 1818400000 2494200000 12139000 10128000 37045000 8500 2895;4226 7741 71256;71257;71258;71259;71260;71261;71262;71263;71264;71265;71266 56550;56551;56552;56553;56554;56555;56556;56557;56558;56559;56560;56561 56559 11 DNLTLWTADNAGEEGGEAPQEPQS Unmodified 2528.0939 0.093919563 1312 P31947 SFN 14-3-3 protein sigma yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 80.624 80.672 3 2.8569E-11 93391 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 39.223 37.956 105410000 0 0 0 4084700 2159700 4843600 3720300 3770500 0 9039400 14558000 15555000 3335400 9986000 34355000 8501 1312 7742 71267;71268;71269;71270;71271;71272;71273;71274;71275;71276;71277 56562;56563;56564;56565;56566;56567 56564 6 DNLTLWTSDMQGDGEEQNK Unmodified 2179.9328 0.93279124 1882 P62258 YWHAE 14-3-3 protein epsilon yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 1 2 1 2 1 1 2 2 1 2 2 77.581 77.673 2;3 7.1466E-300 89168 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 250.89 248.19 531340000 0 0 0 4609900 4760500 19634000 9700000 13464000 4535600 18311000 72775000 59186000 12283000 50236000 261840000 8502 1882 7743 71278;71279;71280;71281;71282;71283;71284;71285;71286;71287;71288;71289;71290;71291;71292;71293;71294;71295 56568;56569;56570;56571;56572;56573;56574;56575;56576;56577;56578;56579;56580;56581;56582;56583;56584 56571 15 DNLTLWTSDMQGDGEEQNK Oxidation (M) 2195.9277 0.92770586 1882 P62258 YWHAE 14-3-3 protein epsilon yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 68.118 68.188 2 3.1463E-50 78164 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 141.54 129.74 114690000 0 0 0 5256900 3962000 5307900 4993200 4018700 0 8132000 16826000 17396000 6607200 13549000 28644000 8503 1882 7743 71296;71297;71298;71299;71300;71301;71302;71303;71304;71305;71306 56585;56586;56587;56588;56589;56590;56591;56592;56593;56594 56588 3051 10 DNLTLWTSDQQDDDGGEGNN Unmodified 2192.873 0.87302775 1869 P61981 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 75.668 75.625 2 2.1257E-07 86890 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.592 93.609 58693000 0 0 0 2572200 2155000 0 0 0 0 0 8440000 0 0 11343000 34183000 8504 1869 7744 71307;71308;71309;71310;71311 56595;56596;56597;56598 56595 4 DNLTLWTSDQQDEEAGEGN Unmodified 2120.8771 0.8770505 2109 Q04917 YWHAH 14-3-3 protein eta yes yes 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 76.94 77.117 2 0.0062998 89095 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 34 31.05 11193000 0 0 0 0 0 0 0 0 0 0 3907500 5087200 0 2197900 0 8505 2109 7745 71312;71313;71314 56599 56599 1 DNLTLWTSDSAGEECDAAEGAEN Unmodified 2453.9765 0.97650654 1214 P27348 YWHAQ 14-3-3 protein theta yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 79.622 79.817 2 0.003665 91966 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.188 48.199 20940000 0 0 0 0 0 0 0 0 0 0 5866700 6028700 0 0 9044700 8506 1214 7746 71315;71316;71317 56600;56601 56600 2 DNLTLWTSDTQGDEAEAGEGGEN Unmodified 2407.9888 0.98878579 1940 P63104 YWHAZ 14-3-3 protein zeta/delta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.589 78.647 2 5.1575E-54 90424 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 155.57 153.33 190640000 0 0 0 4639400 5628500 6755200 4637800 5267400 4858500 9728400 30130000 28701000 6311100 14541000 69443000 8507 1940 7747 71318;71319;71320;71321;71322;71323;71324;71325;71326;71327;71328;71329 56602;56603;56604;56605;56606;56607;56608;56609;56610;56611;56612 56605 11 DNLTLWTSENQGDEGDAGEGEN Unmodified 2349.9469 0.94692097 1311 P31946 YWHAB 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.35 76.397 2 6.9334E-86 87711 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 155.57 154.71 111620000 0 0 0 3000600 2669100 4752500 3901300 5701400 0 5643200 15721000 19452000 4112100 12356000 34307000 8508 1311 7748 71330;71331;71332;71333;71334;71335;71336;71337;71338;71339;71340 56613;56614;56615;56616;56617;56618;56619 56615 7 DNLTSATLPR Unmodified 1086.5669 0.56693715 3542 Q8WUF5 PPP1R13L RelA-associated inhibitor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 48.017 48.268 2 3.2657E-10 54316 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 159.58 119.94 633620000 0 0 0 45481000 0 54128000 0 46398000 46890000 0 84230000 110930000 70369000 52099000 123100000 8509 3542 7749 71341;71342;71343;71344;71345;71346;71347;71348;71349 56620;56621;56622;56623;56624;56625;56626;56627 56623 5 DNLTSATLPRNYK Unmodified 1491.7682 0.76815616 3542 Q8WUF5 PPP1R13L RelA-associated inhibitor yes yes 0 0 1 By MS/MS 2 0 1 1 54.109 46.045 3 0.013153 63310 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 37.594 24.826 11501000 11501000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8510 3542 7750 71350 56628 56628 1 DNMALQR Unmodified 846.40179 0.40178608 1399 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 20.204 20.405 2 0.029861 19712 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 75.269 48.148 90836000 0 0 0 7592600 7743100 0 6048200 0 0 12342000 0 15387000 8767600 11637000 21319000 8511 1399 7751 71351;71352;71353;71354;71355;71356;71357;71358 56629;56630 56629 2 DNNGVIGLLEPMK Unmodified 1398.7177 0.71770049 1078 P18754 RCC1 Regulator of chromosome condensation yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 86.412 86.543 2 0.00082763 99980 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.721 59.489 8172700 0 0 0 0 0 0 0 0 0 0 0 0 0 2043300 6129400 8512 1078 7752 71359;71360 56631 56631 1 DNNLLGK Unmodified 772.40792 0.40791731 934;1743 P11142;P54652 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.05 3.89 2 3 2 12 4 2 1 1 1 1 1 1 1 1 1 1 1 1 1 33.45 33.004 2 0.012018 29163 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.08 69.481 10566000000 927670000 7162400000 40752000 174120000 107620000 133550000 158500000 129640000 103930000 162080000 316040000 222810000 197800000 283530000 445930000 8513 934;1743 7753 71361;71362;71363;71364;71365;71366;71367;71368;71369;71370;71371;71372;71373;71374;71375;71376;71377;71378;71379 56632;56633;56634;56635;56636;56637;56638;56639;56640;56641;56642;56643;56644;56645;56646;56647;56648;56649;56650;56651;56652;56653;56654;56655 56634 22 DNNLLGR Unmodified 800.41407 0.41406533 908;1047 P0DMV9;P0DMV8;P17066 HSPA1B;HSPA1A;HSPA6 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6 no no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 28.678 28.781 2 0.02228 31315 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 105.22 70.393 874590000 0 0 0 72084000 39262000 77254000 57937000 52615000 34166000 0 175750000 0 0 0 365520000 8514 908;1047 7754 71380;71381;71382;71383;71384;71385;71386;71387 56656;56657;56658;56659;56660;56661 56661 6 DNNLTTGK Unmodified 861.41921 0.41921028 1061 P17812 CTPS1 CTP synthase 1 yes yes 0 0 0 By MS/MS 1 0 1 1 106.52 111.79 2 0.0072915 92380 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 138.26 0 61280000 61280000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8515 1061 7755 71388 56662 56662 1 DNNMAPYYEALCK Oxidation (M) 1603.6647 0.66467864 2471 Q15008 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 61.794 61.929 2 0.00060449 70670 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 68.132 57.303 46514000 0 0 0 0 5029300 5560700 1622200 0 0 12595000 0 15635000 0 0 6072100 8516 2471 7756 71389;71390;71391;71392;71393;71394 56663;56664;56665 56663 4069 3 DNNMAPYYEALCK Unmodified 1587.6698 0.66976402 2471 Q15008 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 73.365 73.618 2 3.9351E-06 84823 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 91.313 86.373 43018000 0 0 0 0 0 0 0 0 0 11655000 0 22747000 0 0 8617200 8517 2471 7756 71395;71396;71397 56666;56667;56668 56668 2 DNNQFASASLDR Unmodified 1336.6008 0.60075648 1358 P35606 COPB2 Coatomer subunit beta' yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 43.909 43.651 2 3.907E-16 49039 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 157.97 149.5 428020000 0 22373000 0 17741000 16114000 29147000 17743000 25851000 22905000 44935000 51395000 29272000 42701000 32180000 75664000 8518 1358 7757 71398;71399;71400;71401;71402;71403;71404;71405;71406;71407;71408;71409;71410 56669;56670;56671;56672;56673;56674;56675;56676;56677;56678;56679;56680;56681;56682;56683;56684 56678 16 DNNQFASASLDRTIK Unmodified 1678.8275 0.82746195 1358 P35606 COPB2 Coatomer subunit beta' yes yes 0 0 1 By MS/MS 2 0 1 1 58.409 54.59 3 0.028107 68172 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 43.297 30.465 13967000 0 0 13967000 0 0 0 0 0 0 0 0 0 0 0 0 8519 1358 7758 71411 56685 56685 0 DNNSNMDIEER Oxidation (M) 1351.531 0.53102193 5000 Q9ULM3 YEATS2 YEATS domain-containing protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 13.787 13.943 2 0.00019603 13176 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 90.108 78.261 28149000 0 0 0 1980400 3042100 0 2078600 1170700 1331900 4728500 3886700 5860500 2036200 2033300 0 8520 5000 7759 71412;71413;71414;71415;71416;71417;71418;71419;71420;71421 56686;56687;56688;56689;56690 56690 6342 5 DNPAFAFLHDK Unmodified 1273.6091 0.60913632 3251 Q8IWZ8 SUGP1 SURP and G-patch domain-containing protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 2 1 2 1 2 75.545 75.718 2;3 0.00045713 87343 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 84.658 71.305 51602000 0 0 0 0 0 6608100 3332300 0 8764600 0 6266700 5611300 0 5100600 15918000 8521 3251 7760 71422;71423;71424;71425;71426;71427;71428;71429;71430;71431;71432 56691;56692;56693;56694;56695;56696;56697 56691 7 DNPALNAQAALSQAR Unmodified 1538.7801 0.78011783 385 O60232 SSSCA1 Sjoegren syndrome/scleroderma autoantigen 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 65.008 65.164 2 5.6023E-28 73934 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 165.7 159.39 68466000 0 0 0 0 2432000 4159500 2680900 0 2729400 6540100 11281000 10137000 4825900 7051500 16628000 8522 385 7761 71433;71434;71435;71436;71437;71438;71439;71440;71441;71442 56698;56699;56700;56701;56702;56703;56704;56705;56706;56707;56708 56701 11 DNPAQDFSTLYGSSPLER Unmodified 1995.9174 0.91739917 2558 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 84.468 84.657 2 6.3673E-05 97928 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.706 78.654 12465000 0 0 0 0 0 0 0 0 0 0 4575800 0 0 0 7889700 8523 2558 7762 71443;71444;71445;71446 56709;56710;56711;56712 56710 4 DNPEATQQMNDLIIGK Unmodified 1785.8567 0.85671317 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 2 1 1 1 74.624 74.709 2 1.2863E-21 85707 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 117.7 106.17 49762000 0 0 0 3575200 0 7124900 5604500 0 0 0 4481300 5815500 5754000 5059100 12348000 8524 2775 7763 71447;71448;71449;71450;71451;71452;71453;71454;71455 56713;56714;56715;56716;56717;56718;56719 56715 7 DNPFSLGESFGSR Unmodified 1411.6368 0.63680763 3358 Q8N6H7 ARFGAP2 ADP-ribosylation factor GTPase-activating protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.604 79.663 2 0.00114 91650 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.593 72.687 295510000 0 0 0 14186000 12769000 21692000 16429000 20757000 16127000 29881000 35051000 35638000 24972000 22120000 45893000 8525 3358 7764 71456;71457;71458;71459;71460;71461;71462;71463;71464;71465;71466;71467 56720;56721;56722;56723;56724;56725;56726;56727;56728;56729;56730;56731 56723 12 DNPGVVTCLDEAR Unmodified 1444.6616 0.66164217 1137 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 56.982 56.642 2 5.4568E-08 63576 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 102.28 90.64 741200000 0 15880000 0 28373000 21455000 47373000 44072000 29642000 28508000 50140000 96568000 78126000 34811000 77060000 189190000 8526 1137 7765 71468;71469;71470;71471;71472;71473;71474;71475;71476;71477;71478;71479;71480 56732;56733;56734;56735;56736;56737;56738;56739;56740;56741;56742;56743;56744;56745;56746 56742 15 DNPLDPVLAK Unmodified 1080.5815 0.58152458 3738 Q96AG4 LRRC59 Leucine-rich repeat-containing protein 59 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 66.417 66.571 2 0.022318 76043 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 46.158 33.631 159090000 0 0 0 0 11430000 10873000 13456000 13585000 11188000 13368000 19301000 23632000 13568000 12416000 16276000 8527 3738 7766 71481;71482;71483;71484;71485;71486;71487;71488;71489;71490;71491 56747;56748;56749;56750;56751 56750 5 DNPNRGNVNPR Unmodified 1251.6068 0.60684491 5296 Q9Y6W5 WASF2 Wiskott-Aldrich syndrome protein family member 2 yes yes 0 0 1 By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 7.3946 7.5419 3 0.041817 5617 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 25.474 22.172 29336000 0 0 0 0 2249300 3879200 0 2249400 1840000 2734100 0 3541000 3875900 4612600 4354700 8528 5296 7767 71492;71493;71494;71495;71496;71497;71498;71499;71500 56752 56752 1 DNPTVVVEDLRLCTVK Unmodified 1856.9666 0.96659797 2491 Q15057 ACAP2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 yes yes 0 0 1 By MS/MS 3 0 1 1 84.468 81.234 3 0.010359 97380 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 52.887 48.919 8067700 0 8067700 0 0 0 0 0 0 0 0 0 0 0 0 0 8529 2491 7768 71501 56753 56753 0 DNQESSDAELSSSEYIK Unmodified 1900.8174 0.81741035 3897 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 52.802 52.897 2 2.431E-82 59548 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 182.07 165.82 139600000 0 0 0 9205000 10667000 14743000 9980800 8366000 10329000 12341000 20411000 0 12598000 12796000 18166000 8530 3897 7769 71502;71503;71504;71505;71506;71507;71508;71509;71510;71511;71512 56754;56755;56756;56757;56758;56759;56760;56761;56762;56763 56758 10 DNQHQDEAEGDPGNRHEPR Unmodified 2199.9278 0.92779771 158 O00461 GOLIM4 Golgi integral membrane protein 4 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 7.4002 7.5301 4 0.0010259 4911 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.704 36.421 24014000 0 0 0 1191700 0 2081100 1637100 1572800 3077500 0 0 4223800 3219100 3244200 3766800 8531 158 7770 71513;71514;71515;71516;71517;71518;71519;71520;71521 56764;56765 56764 2 DNQHQGSYSEGAQMNGIQPEEIGR Oxidation (M) 2660.1521 0.15211992 430 O60763 USO1 General vesicular transport factor p115 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 47.75 48.101 3 4.1792E-12 54318 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 69.72 63.216 28923000 0 0 0 0 0 6281600 0 0 0 8161000 5315500 9164700 0 0 0 8532 430 7771 71522;71523;71524;71525;71526 56766;56767;56768;56769;56770 56766 549 5 DNQHQGSYSEGAQMNGIQPEEIGR Unmodified 2644.1572 0.1572053 430 O60763 USO1 General vesicular transport factor p115 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 59.046 59.251 3 1.858E-09 66800 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 59.943 52.583 27978000 0 0 0 0 0 5950900 3671200 3895500 0 0 0 8411400 0 6049200 0 8533 430 7771 71527;71528;71529;71530;71531 56771;56772;56773;56774 56773 4 DNQHQGSYSEGAQMNGIQPEEIGRLREEIEELK Unmodified 3783.7758 0.77584367 430 O60763 USO1 General vesicular transport factor p115 yes yes 0 0 2 By MS/MS 2 0 1 1 93.118 84.988 5 2.2595E-27 110119 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.588 76.926 16277000 16277000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8534 430 7772 71532 56775 56775 1 DNQLSEVANK Unmodified 1116.5411 0.54111633 2458 Q14978 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 28.731 28.845 2 7.4388E-43 31156 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 190.26 140.43 168520000 0 0 0 0 19219000 22474000 24222000 23925000 15349000 25029000 0 38304000 0 0 0 8535 2458 7773 71533;71534;71535;71536;71537;71538;71539;71540 56776;56777;56778;56779;56780;56781;56782;56783;56784;56785 56778 9 DNQWNPR Unmodified 928.41513 0.41512796 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.335 22.54 2 0.028147 23103 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 76.847 68.024 108990000 0 0 0 5635700 6439600 6199000 5762200 6639200 6788600 9490500 13885000 17376000 11209000 8625800 10935000 8536 5216 7774 71541;71542;71543;71544;71545;71546;71547;71548;71549;71550;71551;71552 56786;56787;56788;56789 56788 4 DNRFAVALDSEQNNIHVK Unmodified 2069.029 0.029015303 136 O00267 SUPT5H Transcription elongation factor SPT5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 68.872 66.328 3;4 6.4505E-05 88087 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.376 62.092 36301000 21236000 0 0 0 0 5056000 0 0 0 0 0 0 0 0 10009000 8537 136 7775 71553;71554;71555 56790;56791;56792 56792 3 DNRLYLGDK Unmodified 1092.5564 0.55637247 1358 P35606 COPB2 Coatomer subunit beta' yes yes 0 0 1 By MS/MS 3 0 1 1 37.212 32.612 2 0.046188 40797 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 98.048 49.293 10886000 0 10886000 0 0 0 0 0 0 0 0 0 0 0 0 0 8538 1358 7776 71556 56793 56793 1 DNRVVTMEVEARNLDK Unmodified 1887.9473 0.94725951 4064 Q99829 CPNE1 Copine-1 yes yes 0 0 2 By MS/MS 1.5 0.5 1 1 2 89.095 87.58 3 0.00028991 81309 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.777 66.968 34901000 34901000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8539 4064 7777 71557;71558 56794;56795;56796 56796 2 DNRVVTMEVEARNLDK Oxidation (M) 1903.9422 0.94217413 4064 Q99829 CPNE1 Copine-1 yes yes 0 1 2 By MS/MS 2 0 1 1 45.815 42 3 0.022092 52816 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 58.83 48.014 16873000 0 0 16873000 0 0 0 0 0 0 0 0 0 0 0 0 8540 4064 7777 71559 56797 56797 1 DNSCVQEIAEK Unmodified 1291.5714 0.57143018 3453 Q8NG31 CASC5 Protein CASC5 yes yes 0 0 0 By MS/MS 10 0 1 1 34.194 34.529 2 0.046973 38029 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 35.71 14.84 3052900 0 0 0 0 0 0 0 0 0 0 0 0 3052900 0 0 8541 3453 7778 71560 56798 56798 1 DNSEEFLK Unmodified 980.44509 0.44509068 4047 Q99700 ATXN2 Ataxin-2 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 38.573 38.886 2 0.023017 43341 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 60.682 42.696 31306000 0 0 0 0 0 0 4070800 2543900 2963200 0 4232100 0 5561100 5402200 6532800 8542 4047 7779 71561;71562;71563;71564;71565;71566;71567 56799 56799 1 DNSEEFRQR Unmodified 1179.5269 0.52686325 3576 Q8WWM7 ATXN2L Ataxin-2-like protein yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.431 12.582 3 0.023284 11012 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.621 60.317 89585000 0 0 0 4756700 5190300 6146900 6986600 5681600 7132600 11449000 6922800 10088000 9784900 6661900 8784100 8543 3576 7780 71568;71569;71570;71571;71572;71573;71574;71575;71576;71577;71578;71579 56800;56801;56802;56803 56800 0 DNSELEEK Unmodified 962.41927 0.41926986 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 0 By MS/MS 1 0 1 1 106.23 111.5 2 0.012294 92099 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 99.755 32.723 69921000 69921000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8544 3676 7781 71580 56804 56804 1 DNSILPPLDK Unmodified 1110.5921 0.59208927 2136 Q07157 TJP1 Tight junction protein ZO-1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 69.449 69.475 2 0.014232 79965 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 50.805 29.277 41852000 0 0 0 3713900 3206800 5234400 3388600 2867100 0 3946000 4403200 4326100 5529700 5235800 0 8545 2136 7782 71581;71582;71583;71584;71585;71586;71587;71588;71589;71590 56805;56806;56807;56808 56807 4 DNSLVLTPSHIK Unmodified 1322.7194 0.71941505 1633 P50613 CDK7 Cyclin-dependent kinase 7 yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 61.912 55.88 3 0.034625 69433 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 34 24.996 9709600 1916900 0 7792700 0 0 0 0 0 0 0 0 0 0 0 0 8546 1633 7783 71591;71592 56809 56809 1 DNSSMSEKYNLYESMELVTK Unmodified 2367.061 0.061028216 5345 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 33 2 3 4 3 2 3 4 2 2 3 2 3 30.545 30.716 3 0.00079749 34214 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 28.083 21.104 + 6380400000 0 0 0 222640000 389390000 1075100000 322330000 198180000 658340000 845390000 444940000 543170000 693490000 301840000 685580000 8547 5345 7784 71593;71594;71595;71596;71597;71598;71599;71600;71601;71602;71603;71604;71605;71606;71607;71608;71609;71610;71611;71612;71613;71614;71615;71616;71617;71618;71619;71620;71621;71622;71623;71624;71625 56810;56811;56812;56813;56814;56815;56816;56817;56818;56819 56813 10 DNSTMGYMAAK Oxidation (M) 1203.49 0.49000874 850 P07900 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 2 2 1 1 1 1 1 1 2 24.045 24.246 2 2.1361E-05 24232 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 117.81 104.76 396250000 0 0 0 16365000 12590000 72639000 38351000 17215000 14124000 36703000 51941000 38185000 30625000 0 67507000 8548 850 7785 71626;71627;71628;71629;71630;71631;71632;71633;71634;71635;71636;71637;71638;71639 56820;56821;56822;56823;56824;56825;56826;56827;56828;56829;56830;56831;56832 56826 1066;1067 12 DNSTMGYMAAK Unmodified 1187.4951 0.49509412 850 P07900 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.663 36.844 2 0.00066788 39265 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 78.06 64.481 1202000000 0 0 0 38541000 32511000 118040000 48495000 58624000 29678000 93179000 129150000 102750000 82494000 118500000 349990000 8549 850 7785 71640;71641;71642;71643;71644;71645;71646;71647;71648;71649;71650;71651 56833;56834;56835;56836;56837;56838;56839;56840;56841;56842;56843;56844 56840 12 DNSTMGYMAAK 2 Oxidation (M) 1219.4849 0.48492336 850 P07900 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 12.385 12.48 2 0.00015454 11383 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 83.998 78.632 216680000 0 0 0 9217800 11835000 29897000 21665000 14998000 13111000 31814000 0 0 26423000 23397000 34318000 8550 850 7785 71652;71653;71654;71655;71656;71657;71658;71659;71660;71661 56845;56846;56847;56848;56849;56850;56851 56848 1066;1067 5 DNSTMGYMMAK 2 Oxidation (M) 1279.4883 0.48829418 862 P08238;Q58FF7 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 31 3 1 3 3 3 1 3 3 3 3 2 3 23.107 23.367 2 9.0199E-05 24512 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 90.761 85.796 626410000 0 0 0 29978000 9229900 43338000 51458000 33522000 12183000 69225000 74969000 70499000 78319000 40677000 113010000 8551 862 7786 71662;71663;71664;71665;71666;71667;71668;71669;71670;71671;71672;71673;71674;71675;71676;71677;71678;71679;71680;71681;71682;71683;71684;71685;71686;71687;71688;71689;71690;71691;71692 56852;56853;56854;56855;56856;56857;56858;56859;56860;56861;56862;56863;56864;56865;56866;56867;56868;56869;56870;56871;56872;56873;56874;56875;56876;56877;56878;56879;56880;56881;56882;56883;56884;56885;56886;56887;56888 56875 1094;1095;1096 35 DNSTMGYMMAK Oxidation (M) 1263.4934 0.49337956 862 P08238;Q58FF7 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 33 2 3 3 2 2 3 3 3 3 3 4 2 36.243 36.435 2 0.00018375 39962 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 92.838 87.472 1206900000 0 0 0 44932000 48919000 122430000 49241000 53774000 36502000 131740000 191250000 128210000 102090000 119660000 178140000 8552 862 7786 71693;71694;71695;71696;71697;71698;71699;71700;71701;71702;71703;71704;71705;71706;71707;71708;71709;71710;71711;71712;71713;71714;71715;71716;71717;71718;71719;71720;71721;71722;71723;71724;71725 56889;56890;56891;56892;56893;56894;56895;56896;56897;56898;56899;56900;56901;56902;56903;56904;56905;56906;56907;56908;56909;56910;56911;56912;56913;56914;56915;56916;56917;56918;56919;56920;56921;56922 56905 1094;1095;1096 32 DNSTMGYMMAK Unmodified 1247.4985 0.49846494 862 P08238;Q58FF7 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 50.588 50.741 2 0.00036042 56281 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 98.233 89.019 972140000 0 0 0 36119000 33907000 73485000 46786000 38907000 0 87866000 119530000 89945000 49379000 95272000 300940000 8553 862 7786 71726;71727;71728;71729;71730;71731;71732;71733;71734;71735;71736 56923;56924;56925;56926;56927;56928;56929;56930;56931;56932;56933;56934;56935;56936;56937;56938;56939;56940;56941 56932 19 DNSTMGYMMAK 3 Oxidation (M) 1295.4832 0.4832088 862 P08238;Q58FF7 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 0 3 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 12.083 12.245 2 0.00022079 10333 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 94.309 94.309 249750000 0 0 0 13617000 13998000 44414000 0 13554000 14872000 28153000 21277000 28596000 27092000 18627000 25546000 8554 862 7786 71737;71738;71739;71740;71741;71742;71743;71744;71745;71746;71747 56942;56943;56944;56945 56944 1094;1095;1096 4 DNTAQQIK Unmodified 916.46141 0.46140945 1251 P29508 SERPINB3 Serpin B3 yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 8.0319 8.1596 2 0.0071071 6147 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 90.777 59.198 29988000 0 0 0 9264800 0 0 0 2601200 0 0 18122000 0 0 0 0 8555 1251 7787 71748;71749;71750 56946 56946 1 DNTAQQIKK Unmodified 1044.5564 0.55637247 1251 P29508 SERPINB3 Serpin B3 yes yes 0 0 1 By MS/MS By matching 10 0 2 1 1 6.3206 6.338 2 0.041441 4084 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 84.743 63.796 4352800 0 0 0 3966500 0 0 0 386390 0 0 0 0 0 0 0 8556 1251 7788 71751;71752 56947 56947 1 DNTAQQISK Unmodified 1003.4934 0.49343786 1545 P48594 SERPINB4 Serpin B4 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 8.8879 9.0001 2 0.012243 7709 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 61.602 27.959 51267000 0 0 0 46911000 0 0 0 0 0 0 4355900 0 0 0 0 8557 1545 7789 71753;71754 56948;56949 56949 2 DNTIMDLQTQLK Unmodified 1418.7075 0.70752973 3217 Q8IUD2 ERC1 ELKS/Rab6-interacting/CAST family member 1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 77.533 77.587 2 0.0017273 89720 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 65.5 41.65 22177000 0 0 0 0 3485400 0 2743700 0 0 5528300 6685900 0 0 3734000 0 8558 3217 7790 71755;71756;71757;71758;71759 56950;56951;56952 56951 3 DNTINLIHTFR Unmodified 1342.6993 0.69934831 257 O15144 ARPC2 Actin-related protein 2/3 complex subunit 2 yes yes 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 73.937 74.031 3 0.039692 84796 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 27.862 12.106 47355000 0 0 0 3271300 0 6321200 2114100 2358800 0 3262800 3867600 4229600 0 4171600 17758000 8559 257 7791 71760;71761;71762;71763;71764;71765;71766;71767;71768 56953 56953 1 DNTQRFLQEEAEK Unmodified 1606.7587 0.75871368 2501 Q15149 PLEC Plectin yes yes 0 0 1 By MS/MS 2 0 1 1 41.114 37.504 3 0.037135 46984 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 26.627 4.8517 6969000 0 0 6969000 0 0 0 0 0 0 0 0 0 0 0 0 8560 2501 7792 71769 56954 56954 1 DNTRPGANSPEMWSEAIK Unmodified 2001.9214 0.92143869 3608 Q92499 DDX1 ATP-dependent RNA helicase DDX1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.87 3 5 1 1 1 1 1 1 1 1 70.977 67.552 3 0.00051372 77125 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 50.883 45.223 129830000 12706000 83008000 4909000 8316200 0 0 0 0 0 20887000 0 0 0 0 0 8561 3608 7793 71770;71771;71772;71773;71774;71775;71776;71777 56955;56956;56957;56958;56959;56960;56961;56962;56963 56956 9 DNTRPGANSPEMWSEAIK Oxidation (M) 2017.9164 0.91635331 3608 Q92499 DDX1 ATP-dependent RNA helicase DDX1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS 6 4 2 2 1 1 1 1 61.096 58.545 3 0.00021979 67367 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 51.487 40.208 57120000 0 35074000 5168700 7543500 0 0 0 0 0 9334000 0 0 0 0 0 8562 3608 7793 71778;71779;71780;71781 56964;56965;56966;56967 56967 5100 3 DNTSVYHISGK Unmodified 1219.5833 0.5833155 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 27.814 28.05 2 0.0026758 29130 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.595 49.356 56083000 0 0 0 0 3549000 7780300 0 4267100 3824600 6480400 0 7421400 4283600 7421600 11055000 8563 4634 7794 71782;71783;71784;71785;71786;71787;71788;71789;71790 56968;56969 56969 2 DNTTLLTQVQTTMR Unmodified 1620.8141 0.81412007 2317 Q13561 DCTN2 Dynactin subunit 2 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 78.264 78.405 2 8.775E-06 90669 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 111.94 89.908 57130000 0 0 0 0 0 5197100 2505600 4234400 0 6045300 8192600 7190600 3754200 4225300 15785000 8564 2317 7795 71791;71792;71793;71794;71795;71796;71797;71798;71799 56970;56971;56972;56973 56971 3 DNTTLLTQVQTTMR Oxidation (M) 1636.809 0.80903469 2317 Q13561 DCTN2 Dynactin subunit 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 63.144 63.34 2 0.0011264 71700 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.776 31.394 40301000 0 0 0 0 4565000 0 0 0 0 6951200 5198300 7147000 5379500 4469200 6591000 8565 2317 7795 71800;71801;71802;71803;71804;71805;71806 56974 56974 3781 1 DNTVIDHTLPTPEAAEFLK Unmodified 2110.0582 0.058249746 466 O75164 KDM4A Lysine-specific demethylase 4A yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 88.5 84.986 3 6.8178E-07 105824 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.574 69.282 56682000 0 54154000 2527300 0 0 0 0 0 0 0 0 0 0 0 0 8566 466 7796 71807;71808;71809 56975;56976;56977 56975 3 DNVDDPTGNFR Unmodified 1248.5371 0.53709359 2208 Q12907 LMAN2 Vesicular integral-membrane protein VIP36 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 38.621 39.272 2 0.014237 43211 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 83.783 78.624 135910000 0 0 0 0 0 0 0 0 0 0 44276000 43536000 0 0 48102000 8567 2208 7797 71810;71811;71812 56978 56978 0 DNVVIVYELLEEMLDNGFPLATESNILK Unmodified 3177.6155 0.61553341 5117 Q9Y2T2 AP3M1 AP-3 complex subunit mu-1 yes yes 0 0 0 By MS/MS 2 0 1 1 107.14 102.39 3 0.017867 126365 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 19.769 8.6643 4211100 0 4211100 0 0 0 0 0 0 0 0 0 0 0 0 0 8568 5117 7798 71813 56979 56979 1 DNWDDDDDEK Unmodified 1265.432 0.43201939 547 O75822 EIF3J Eukaryotic translation initiation factor 3 subunit J yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 19.053 19.449 2 0.024368 19550 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 44.98 44.98 13066000 0 0 0 0 0 1938200 0 0 0 0 2029000 2024900 0 1911400 5162600 8569 547 7799 71814;71815;71816;71817;71818 56980;56981 56981 2 DNWDDDDDEKK Unmodified 1393.527 0.52698241 547 O75822 EIF3J Eukaryotic translation initiation factor 3 subunit J yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 15.025 11.592 3 0.032098 15460 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 42.475 42.475 14788000 0 14788000 0 0 0 0 0 0 0 0 0 0 0 0 0 8570 547 7800 71819;71820 56982 56982 1 DNWSPALTISK Unmodified 1230.6245 0.62445203 3921;1677 Q96LR5;Q969T4;P51965 UBE2E2;UBE2E3;UBE2E1 Ubiquitin-conjugating enzyme E2 E2;Ubiquitin-conjugating enzyme E2 E3;Ubiquitin-conjugating enzyme E2 E1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.18 3.29 3 1 13 1 2 1 1 1 1 1 1 1 1 1 1 1 2 1 72.082 70.986 2 0.0012156 88024 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.62 83.547 850880000 14182000 706090000 3675300 4876200 4783800 16787000 6810300 10666000 5776600 15471000 12733000 8485400 9100300 11340000 20095000 8571 3921;1677 7801 71821;71822;71823;71824;71825;71826;71827;71828;71829;71830;71831;71832;71833;71834;71835;71836;71837 56983;56984;56985;56986;56987;56988;56989;56990;56991;56992 56985 6 DNWSSSDGKDDPIEVSK Unmodified 1877.8279 0.82791546 3548 Q8WUM0 NUP133 Nuclear pore complex protein Nup133 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.844 48.006 3 0.00015287 53948 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 65.943 62.102 85826000 0 0 0 3478100 4914900 6904800 6027300 5856700 3961800 9292400 7848900 8712500 9355900 7746600 11726000 8572 3548 7802 71838;71839;71840;71841;71842;71843;71844;71845;71846;71847;71848;71849 56993;56994;56995;56996;56997;56998;56999;57000;57001;57002;57003;57004 56999 12 DNYPQSVPR Unmodified 1074.5094 0.50942227 121 O00159 MYO1C Unconventional myosin-Ic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 31.067 31.116 2 0.0039848 34178 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 88.294 63.443 72253000 0 0 0 9682300 12366000 0 12983000 10108000 10755000 0 0 16359000 0 0 0 8573 121 7803 71850;71851;71852;71853;71854;71855 57005;57006;57007 57007 3 DNYSPGWK Unmodified 965.4243 0.42429566 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 34.897 35.184 2 0.049796 37631 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.994 35.273 42415000 0 0 0 0 2810600 0 2978400 3746200 0 0 6945600 6661500 0 4183200 15089000 8574 848 7804 71856;71857;71858;71859;71860;71861;71862 57008 57008 1 DPAAVTESK Unmodified 916.45018 0.45017606 3491 Q8TCT9 HM13 Minor histocompatibility antigen H13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 11.551 11.69 2 0.0036441 9808 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 95.502 62.144 42651000 0 0 0 4690100 3692200 0 4585000 5824500 0 4799100 3441700 8024300 4266100 3327900 0 8575 3491 7805 71863;71864;71865;71866;71867;71868;71869;71870;71871 57009;57010;57011;57012;57013;57014;57015;57016;57017 57011 9 DPAEGDGAQPEETPR Unmodified 1567.675 0.67504363 2441 Q14697 GANAB Neutral alpha-glucosidase AB yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 22.613 22.652 2 5.1655E-28 23007 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 140.01 128.84 24686000 0 0 0 3044100 1985500 0 3875600 0 0 0 0 0 0 0 15781000 8576 2441 7806 71872;71873;71874;71875;71876;71877 57018;57019;57020;57021 57018 4 DPAEGDGAQPEETPRDGDKPEETQGK Unmodified 2752.206 0.20598921 2441 Q14697 GANAB Neutral alpha-glucosidase AB yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.66 2.95 4 1 24 2 3 2 2 2 2 2 2 2 2 2 2 2 2 23.1 22.477 3;4 1.7561E-102 23352 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 157.07 154.19 693300000 84890000 146370000 0 14384000 9512500 15705000 10716000 15503000 15311000 32296000 58970000 63218000 33560000 69126000 123740000 8577 2441 7807 71878;71879;71880;71881;71882;71883;71884;71885;71886;71887;71888;71889;71890;71891;71892;71893;71894;71895;71896;71897;71898;71899;71900;71901;71902;71903;71904;71905;71906 57022;57023;57024;57025;57026;57027;57028;57029;57030;57031;57032;57033;57034;57035;57036;57037;57038;57039;57040;57041;57042;57043;57044;57045;57046;57047;57048 57045 27 DPAEQQGK Unmodified 871.40356 0.40356022 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 0 By MS/MS 1 0 1 1 106.21 111.47 2 0.0012564 92114 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 155.51 124.21 64700000 64700000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8578 2102 7808 71907 57049 57049 1 DPAETLHLSEPLGGK Unmodified 1562.794 0.79403655 3191 Q86X76 NIT1 Nitrilase homolog 1 yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 67.14 67.48 3 0.012324 76766 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.301 23.249 14270000 0 0 0 0 0 0 0 0 0 0 4435100 0 0 2772900 7062200 8579 3191 7809 71908;71909;71910 57050 57050 1 DPAGDISVTPPAPAALPVALPTVASK Unmodified 2454.337 0.33699079 3466 Q8NI35 INADL InaD-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 93.022 93.155 3 0.001098 108078 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 26.789 19.69 10740000 0 0 0 0 0 847690 0 1349600 0 2218000 1108700 2318500 0 0 2897700 8580 3466 7810 71911;71912;71913;71914;71915;71916 57051;57052;57053 57052 3 DPAITSILEK Unmodified 1085.5968 0.5968403 4921 Q9UI42 CPA4 Carboxypeptidase A4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 2 1 75.812 75.679 2 0.0023779 87789 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 84.213 51.214 33147000 0 0 0 19325000 2998900 0 0 8272300 0 0 0 0 0 2550700 0 8581 4921 7811 71917;71918;71919;71920;71921;71922 57054;57055;57056;57057;57058;57059 57058 6 DPALNTSLPQK Unmodified 1182.6245 0.62445203 3520 Q8TEU7 RAPGEF6 Rap guanine nucleotide exchange factor 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 45.768 45.939 2 0.020977 51912 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 50.372 39.662 69520000 0 0 0 6075800 5093500 6225200 5353300 5250300 0 6105200 6179000 7013200 7204300 4798200 10222000 8582 3520 7812 71923;71924;71925;71926;71927;71928;71929;71930;71931;71932;71933 57060;57061 57061 2 DPANFQYPAESVLAYK Unmodified 1811.873 0.87301516 1023 P15559 NQO1 NAD(P)H dehydrogenase [quinone] 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.55 3.6 5 2 15 1 4 2 1 1 1 1 1 1 2 2 1 2 2 84.135 82.803 2;3 1.3754E-72 102487 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 195.77 181.86 4644600000 34857000 4421900000 17991000 1222300 3199400 6947500 3338300 3907600 0 0 24077000 23566000 3963700 20539000 79028000 8583 1023 7813 71934;71935;71936;71937;71938;71939;71940;71941;71942;71943;71944;71945;71946;71947;71948;71949;71950;71951;71952;71953;71954;71955 57062;57063;57064;57065;57066;57067;57068;57069;57070;57071;57072;57073;57074;57075;57076;57077;57078;57079;57080;57081 57067 19 DPAQAPQA Unmodified 796.37153 0.37153181 4064 Q99829 CPNE1 Copine-1 yes yes 0 0 0 By MS/MS 1 0 1 1 56.734 37.561 2 0.012214 38808 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 106.42 102.8 7958600 7958600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8584 4064 7814 71956 57082 57082 1 DPAQGQLLK Unmodified 968.5291 0.52909508 1128 P21695 GPD1 Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic yes yes 0 0 0 By MS/MS 2 0 1 1 36.818 31.903 2 0.022246 41759 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.208 50.317 20977000 0 20977000 0 0 0 0 0 0 0 0 0 0 0 0 0 8585 1128 7815 71957 57083 57083 1 DPCDPNYTTPLHLAAK Unmodified 1811.8512 0.85123386 3588 Q8WXE0 CASKIN2 Caskin-2 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 65.655 65.763 3 0.02489 74550 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 21.233 17.714 12164000 0 0 0 0 0 2782100 0 0 0 2960700 0 0 3420700 3000300 0 8586 3588 7816 71958;71959;71960;71961 57084 57084 1 DPDAQPGGELMLGGTDSK Oxidation (M) 1802.7993 0.79925787 839 P07339 CTSD Cathepsin D;Cathepsin D light chain;Cathepsin D heavy chain yes yes 0 1 0 By MS/MS 10 0 1 1 54.298 53.642 2 0.00071249 61382 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 49.333 44.235 23476000 0 0 0 23476000 0 0 0 0 0 0 0 0 0 0 0 8587 839 7817 71962 57085 57085 1029 1 DPDAQPGGELMLGGTDSK Unmodified 1786.8043 0.80434324 839 P07339 CTSD Cathepsin D;Cathepsin D light chain;Cathepsin D heavy chain yes yes 0 0 0 By MS/MS 10 0 1 1 63.617 62.923 2 1.1566E-05 72570 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 73.848 68.241 12311000 0 0 0 12311000 0 0 0 0 0 0 0 0 0 0 0 8588 839 7817 71963 57086 57086 1 DPDASKPEDWDER Unmodified 1558.6536 0.65357991 1225 P27797 CALR Calreticulin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 34.158 34.158 3 0.0078597 36557 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 42.52 39.734 23592000 0 0 0 0 5384200 0 0 0 5693900 0 0 0 0 12513000 0 8589 1225 7818 71964;71965;71966 57087 57087 1 DPDASKPEDWDERAK Unmodified 1757.7857 0.78565671 1225 P27797 CALR Calreticulin yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.83 3.52 7 1 21 3 3 2 1 2 2 1 1 2 2 2 2 2 2 2 31.093 30.073 2;3;4 4.4623E-34 41061 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 160.18 151.46 982310000 365370000 134170000 33981000 11613000 16586000 24934000 11674000 18552000 29340000 31774000 48571000 41352000 36107000 48182000 130110000 8590 1225 7819 71967;71968;71969;71970;71971;71972;71973;71974;71975;71976;71977;71978;71979;71980;71981;71982;71983;71984;71985;71986;71987;71988;71989;71990;71991;71992;71993;71994;71995 57088;57089;57090;57091;57092;57093;57094;57095;57096;57097;57098;57099;57100;57101;57102;57103;57104;57105;57106;57107 57099 18 DPDMAMEICATDAVDDMEEGLK Oxidation (M) 2470.9848 0.98482808 2654 Q2NL82 TSR1 Pre-rRNA-processing protein TSR1 homolog yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 93.357 89.295 3 0.0006063 110563 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 49.593 46.831 22595000 0 22595000 0 0 0 0 0 0 0 0 0 0 0 0 0 8591 2654 7820 71996;71997 57108 57108 4320 1 DPDMAMEICATDAVDDMEEGLK Unmodified 2454.9899 0.98991346 2654 Q2NL82 TSR1 Pre-rRNA-processing protein TSR1 homolog yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 95.64 91.602 3 8.9862E-07 113221 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.398 69.398 22716000 0 22716000 0 0 0 0 0 0 0 0 0 0 0 0 0 8592 2654 7820 71998;71999 57109;57110 57109 2 DPDPEFPTVK Unmodified 1143.5448 0.54480473 3844 Q96G03 PGM2 Phosphoglucomutase-2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 56.493 56.693 2 0.044161 65267 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 38.754 28.843 26246000 0 0 0 4118400 0 3326200 0 0 0 0 5639200 3975700 0 0 9186600 8593 3844 7821 72000;72001;72002;72003;72004 57111 57111 1 DPDQLYTTLK Unmodified 1192.5976 0.59756858 3668 Q92830 KAT2A Histone acetyltransferase KAT2A yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 60.017 60.268 2 0.0024108 69062 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 83.883 53.694 66334000 0 0 0 0 0 0 11305000 7350900 0 16414000 10149000 12417000 8697900 0 0 8594 3668 7822 72005;72006;72007;72008;72009;72010 57112;57113;57114 57112 2 DPDTEEYRK Unmodified 1151.5095 0.50948185 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.1 3.37 6 1 22 2 3 2 2 1 2 2 2 2 2 1 2 2 2 2 10.758 10.096 2;3 0.0013364 8405 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 152.63 138.47 686070000 49636000 340740000 7184900 13340000 2194400 19924000 27447000 15854000 20142000 21068000 24529000 31936000 26785000 38853000 46439000 8595 965 7823 72011;72012;72013;72014;72015;72016;72017;72018;72019;72020;72021;72022;72023;72024;72025;72026;72027;72028;72029;72030;72031;72032;72033;72034;72035;72036;72037;72038;72039 57115;57116;57117;57118;57119;57120;57121;57122;57123;57124;57125;57126;57127;57128;57129 57120 10 DPDYQPPAK Unmodified 1029.4767 0.47672516 1587 P49711 CTCF Transcriptional repressor CTCF yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.635 23.839 2 0.022744 23808 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 51.346 36.677 45761000 0 0 0 4915100 3468900 3153900 2859500 2683700 2320800 4304700 4042200 3405900 5688400 4008700 4908900 8596 1587 7824 72040;72041;72042;72043;72044;72045;72046;72047;72048;72049;72050;72051 57130;57131;57132 57132 3 DPEALAQLMLSIPLTNDGK Unmodified 2025.0452 0.045242218 3429 Q8NEU8 APPL2 DCC-interacting protein 13-beta yes yes 0 0 0 By MS/MS 2 0 1 1 101.8 97.085 3 0.00020486 119963 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 49.865 43.597 4593400 0 4593400 0 0 0 0 0 0 0 0 0 0 0 0 0 8597 3429 7825 72052 57133 57133 1 DPEAPIFQVADYGIVADLFK Unmodified 2207.115 0.11503634 988 P13804 ETFA Electron transfer flavoprotein subunit alpha, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 103.13 94.998 2 7.3019E-23 122121 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 130.27 119.94 13257000 13257000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8598 988 7826 72053 57134 57134 1 DPEGFVGHPVNAFK Unmodified 1512.7361 0.73612775 983 P13674 P4HA1 Prolyl 4-hydroxylase subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.11 3.8 6 1 12 2 3 2 1 1 1 1 1 1 1 1 1 1 1 1 65.912 63.852 2;3 2.1629E-09 85010 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.38 96.612 427820000 43980000 170160000 76143000 5899000 4479500 6719400 7684600 10744000 9254000 10825000 14229000 14544000 10011000 13197000 29945000 8599 983 7827 72054;72055;72056;72057;72058;72059;72060;72061;72062;72063;72064;72065;72066;72067;72068;72069;72070;72071;72072 57135;57136;57137;57138;57139;57140;57141;57142;57143;57144;57145;57146 57143 12 DPEGTPYINHPIGVAR Unmodified 1734.8689 0.86893283 3332 Q8N4P3 HDDC3 Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 58.427 58.615 3 0.003011 66779 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 54.234 49.668 65523000 0 0 0 0 4170300 3995600 10703000 12606000 12157000 0 4855700 11901000 0 0 5133300 8600 3332 7828 72073;72074;72075;72076;72077;72078;72079;72080 57147;57148;57149;57150;57151;57152 57151 5 DPEIADLFYK Unmodified 1209.5918 0.59175492 4369 Q9H2K8 TAOK3 Serine/threonine-protein kinase TAO3 yes yes 0 0 0 By MS/MS 2 0 1 1 89.197 84.324 2 0.028415 104863 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 59.597 39.81 14419000 0 14419000 0 0 0 0 0 0 0 0 0 0 0 0 0 8601 4369 7829 72081 57153 57153 1 DPEIAELFFK Unmodified 1207.6125 0.61249036 3057 Q7L7X3 TAOK1 Serine/threonine-protein kinase TAO1 yes yes 0 0 0 By MS/MS 2 0 1 1 97.227 89.096 2 0.0047016 115149 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.37 72.167 5999200 5999200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8602 3057 7830 72082 57154 57154 1 DPENFPFVVLGNK Unmodified 1474.7456 0.7456298 1647 P51149 RAB7A Ras-related protein Rab-7a yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 89.595 89.666 2 9.8821E-16 104083 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 147.95 125.37 246320000 0 0 0 5764900 11432000 16326000 12254000 18744000 14382000 29363000 26289000 31846000 17841000 21540000 40541000 8603 1647 7831 72083;72084;72085;72086;72087;72088;72089;72090;72091;72092;72093;72094 57155;57156;57157;57158;57159;57160;57161;57162;57163;57164;57165;57166;57167;57168 57160 14 DPENILHRSPQQVQTLLS Unmodified 2074.0807 0.080716522 5121 Q9Y2V7 COG6 Conserved oligomeric Golgi complex subunit 6 yes yes 0 0 1 By MS/MS 2 0 1 1 83.57 75.439 3 0.013445 98599 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 34.721 18.956 16403000 16403000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8604 5121 7832 72095 57169 57169 1 DPEPAFQR Unmodified 958.45084 0.45084476 451 O75044 SRGAP2 SLIT-ROBO Rho GTPase-activating protein 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 30.237 30.498 2 0.025287 31914 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 58.819 35.8 55404000 0 0 0 0 3884400 0 4416100 4463000 4113200 6979200 5486500 9246100 6344900 4719000 5751500 8605 451 7833 72096;72097;72098;72099;72100;72101;72102;72103;72104;72105 57170;57171;57172;57173;57174 57172 5 DPEQEVEK Unmodified 972.44001 0.4400053 4230 Q9BXP5 SRRT Serrate RNA effector molecule homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.96 2.76 1 2 21 2 1 1 2 2 2 2 2 2 2 1 2 2 1 18.697 18.739 2 0.0013203 92501 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 166.52 139.39 396630000 64186000 11161000 0 9025700 22169000 28423000 34949000 27484000 25406000 22708000 24712000 19215000 45873000 27090000 34225000 8606 4230 7834 72106;72107;72108;72109;72110;72111;72112;72113;72114;72115;72116;72117;72118;72119;72120;72121;72122;72123;72124;72125;72126;72127;72128;72129 57175;57176;57177;57178;57179;57180;57181;57182;57183;57184;57185;57186;57187;57188;57189 57181 15 DPERPPVHDQLQDPR Unmodified 1797.8758 0.87580912 3078 Q7Z333 SETX Probable helicase senataxin yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 34.353 34.724 3 2.9119E-05 38390 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 78.932 62.402 28465000 0 0 0 0 0 0 3545300 0 0 0 0 0 9086600 0 15833000 8607 3078 7835 72130;72131;72132;72133 57190;57191;57192 57192 3 DPESLLVPAPLSGPR Unmodified 1546.8355 0.83550744 3413 Q8ND04 SMG8 Protein SMG8 yes yes 0 0 0 By MS/MS 10 0 1 1 84.687 84.879 2 0.01275 98350 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 44.765 35.11 3227300 0 0 0 0 0 0 0 3227300 0 0 0 0 0 0 0 8608 3413 7836 72134 57193 57193 1 DPETYEVDSGTTK Unmodified 1440.6256 0.62563382 2666 Q3B726 TWISTNB DNA-directed RNA polymerase I subunit RPA43 yes yes 0 0 0 By MS/MS 10 0 1 1 30.471 31.174 2 0.0056989 32903 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.979 59.222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8609 2666 7837 72135 57194 57194 1 DPFAHLPK Unmodified 923.4865 0.48650199 1211 P26641 EEF1G Elongation factor 1-gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.11 3.81 1 4 2 12 4 2 1 1 1 1 1 1 1 1 1 1 1 1 1 54.156 52.988 2 0.0046473 62674 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 128.57 65.849 10592000000 3435300000 2617200000 2173100000 71624000 65254000 234160000 144430000 94510000 115490000 185200000 275820000 304060000 163610000 234890000 477170000 8610 1211 7838 72136;72137;72138;72139;72140;72141;72142;72143;72144;72145;72146;72147;72148;72149;72150;72151;72152;72153;72154 57195;57196;57197;57198;57199;57200;57201;57202;57203;57204;57205;57206;57207;57208;57209;57210;57211;57212;57213;57214;57215;57216;57217 57214 20 DPFEDLLQK Unmodified 1103.5499 0.5498901 3516 Q8TEH3 DENND1A DENN domain-containing protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 80.252 80.295 2 0.0037281 92878 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 96.027 85.559 90706000 0 0 0 4292000 4246200 9296100 5184400 8656600 5761600 8002200 11871000 14680000 8062000 10654000 0 8611 3516 7839 72155;72156;72157;72158;72159;72160;72161;72162;72163;72164;72165 57218;57219;57220;57221;57222;57223;57224;57225;57226;57227;57228 57226 11 DPFVIPLGK Unmodified 984.56442 0.56441796 4373 Q9H2U1 DHX36 ATP-dependent RNA helicase DHX36 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 82.63 82.117 2 0.0073451 101525 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.195 77.559 75105000 0 45906000 1227800 735440 865080 2274500 635480 1667000 0 3937900 3157400 2700100 2950300 3083600 5963800 8612 4373 7840 72166;72167;72168;72169;72170;72171;72172;72173;72174;72175;72176;72177;72178 57229;57230;57231;57232;57233;57234;57235;57236 57231 8 DPFYMGLYQK Oxidation (M) 1276.5798 0.57981002 1154 P23368 ME2 NAD-dependent malic enzyme, mitochondrial yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 66.266 66.263 2 0.00093493 75854 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 91.783 86.051 156260000 0 0 0 6478700 13627000 16254000 22687000 14249000 0 20663000 24745000 37558000 0 0 0 8613 1154 7841 72179;72180;72181;72182;72183;72184;72185;72186 57237;57238;57239;57240;57241;57242;57243;57244 57240 1664 8 DPFYMGLYQK Unmodified 1260.5849 0.5848954 1154 P23368 ME2 NAD-dependent malic enzyme, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 78.767 78.795 2 0.00054585 91100 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 133.12 123.09 163380000 0 0 0 4737200 12925000 18315000 9276300 22613000 18167000 20049000 27983000 29315000 0 0 0 8614 1154 7841 72187;72188;72189;72190;72191;72192;72193;72194;72195 57245;57246;57247;57248;57249;57250;57251;57252;57253 57249 9 DPGAVDLEK Unmodified 942.46583 0.46582612 39 A9UHW6 MIF4GD MIF4G domain-containing protein yes yes 0 0 0 By MS/MS 2 0 1 1 35.459 29.111 2 0.066454 40863 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.299 35.58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8615 39 7842 72196 57254 57254 1 DPGGGGGPVR Unmodified 867.41988 0.41987898 3213 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 9.5099 9.6436 2 0.001544 8073 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 90.37 75.594 166220000 0 0 0 12413000 10585000 14734000 17094000 14788000 10960000 9208700 21190000 16600000 12917000 9615800 16115000 8616 3213 7843 72197;72198;72199;72200;72201;72202;72203;72204;72205;72206;72207;72208 57255;57256;57257;57258;57259;57260;57261;57262;57263;57264 57263 9 DPGGLLLLPEK Unmodified 1150.6598 0.65977491 297 O43149 ZZEF1 Zinc finger ZZ-type and EF-hand domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching 8.4 3.2 1 4 1 1 1 1 1 82.765 81.915 2 3.5506E-09 101060 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.07 126.36 55585000 0 45054000 0 0 0 2718500 0 0 0 0 1674300 0 0 1811800 4326400 8617 297 7844 72209;72210;72211;72212;72213 57265;57266;57267 57266 3 DPGGSEFDSISK Unmodified 1237.5463 0.54626129 4417 Q9H6K1 C6orf106 Uncharacterized protein C6orf106 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 45.875 43.119 2 1.9113E-08 54373 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.69 94.292 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8618 4417 7845 72214;72215 57268;57269 57269 2 DPGLVDQLVK Unmodified 1082.5972 0.59717465 1580 P49591 SARS Serine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 73.756 73.06 2 0.00025905 84329 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 140.45 96.097 2911300000 0 2565700000 26089000 10548000 13050000 19713000 13406000 11176000 11328000 25423000 37076000 44325000 15671000 33686000 84090000 8619 1580 7846 72216;72217;72218;72219;72220;72221;72222;72223;72224;72225;72226;72227;72228;72229;72230 57270;57271;57272;57273;57274;57275;57276;57277;57278;57279;57280;57281;57282;57283;57284 57271 12 DPGMGAMGGMGGGMGGGMF 5 Oxidation (M) 1753.5874 0.58743265 930 P10809 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 0 5 0 By MS/MS By MS/MS 5.5 4.5 1 1 1 1 67.703 70.365 2 0.00017031 42245 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 45.653 45.653 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8620 930 7847 72231;72232 57285;57286 57285 1194;1195;1196;1197;1198 2 DPGMGAMGGMGGGMGGGMF Oxidation (M) 1689.6078 0.60777416 930 P10809 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 0 1 0 By MS/MS 2 0 3 3 85.365 80.597 2 5.71E-08 100365 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.345 93.345 102770000 0 102770000 0 0 0 0 0 0 0 0 0 0 0 0 0 8621 930 7847 72233;72234;72235 57287;57288;57289 57288 1194;1195;1196;1197;1198 3 DPGMGAMGGMGGGMGGGMF Unmodified 1673.6129 0.61285954 930 P10809 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 91.591 86.681 2 2.5444E-51 107632 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.3 134.3 82291000 0 82291000 0 0 0 0 0 0 0 0 0 0 0 0 0 8622 930 7847 72236 57290 57290 1 DPGSAERTAQK Unmodified 1158.5629 0.56291441 5005 Q9ULU4 ZMYND8 Protein kinase C-binding protein 1 yes yes 0 0 1 By MS/MS By matching 2.33 0.471 2 1 2 1 6.3268 3.3862 2 1.6441E-15 5242 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 166.66 123.79 56500000 0 46920000 9580900 0 0 0 0 0 0 0 0 0 0 0 0 8623 5005 7848 72237;72238;72239 57291;57292;57293 57292 3 DPGTVANK Unmodified 800.40283 0.40283194 3659 Q92783 STAM Signal transducing adapter molecule 1 yes yes 0 0 0 By MS/MS 1 0 1 1 106.6 111.87 2 0.0022534 92573 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 152.39 80.369 15239000 15239000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8624 3659 7849 72240 57294 57294 1 DPGTVANKK Unmodified 928.49779 0.49779495 3659 Q92783 STAM Signal transducing adapter molecule 1 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 5.6564 2.3301 2 7.2531E-06 4283 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 159.04 114.35 458440000 351720000 106720000 0 0 0 0 0 0 0 0 0 0 0 0 0 8625 3659 7850 72241;72242;72243 57295;57296 57295 2 DPGTVANKKEEEDLAK Unmodified 1742.8687 0.86865806 3659 Q92783 STAM Signal transducing adapter molecule 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 23.175 23.403 3 0.0023775 24679 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 68.257 58.411 41952000 0 0 0 0 4189100 0 5692400 5395800 0 4117000 5155600 0 5932000 5628200 5841700 8626 3659 7851 72244;72245;72246;72247;72248;72249;72250;72251;72252 57297;57298;57299;57300;57301;57302;57303 57298 6 DPGVLDGATELLGLGGLLYK Unmodified 2000.083 0.083007933 2390 Q14202 ZMYM3 Zinc finger MYM-type protein 3 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 102 97.906 3 2.6961E-05 120996 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 61.87 52.774 9189400 0 9189400 0 0 0 0 0 0 0 0 0 0 0 0 0 8627 2390 7852 72253;72254 57304 57304 1 DPGVLDR Unmodified 770.39227 0.39226725 1314 P31949 S100A11 Protein S100-A11;Protein S100-A11, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25.103 24.413 2 0.014329 32146 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 127.84 81.493 4229200000 71999000 1247200000 37630000 285290000 107130000 128340000 155210000 161470000 101660000 172700000 300540000 310820000 175640000 255300000 718300000 8628 1314 7853 72255;72256;72257;72258;72259;72260;72261;72262;72263;72264;72265;72266;72267;72268;72269 57305;57306;57307;57308;57309;57310;57311;57312;57313;57314;57315;57316 57310 8 DPGVLDRMMK Unmodified 1160.5682 0.56819948 1314 P31949 S100A11 Protein S100-A11;Protein S100-A11, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 1.88 0.331 1 7 4 2 2 71.622 66.75 2;3 0.0024256 77382 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.485 47.615 1077400000 594080000 381820000 101460000 0 0 0 0 0 0 0 0 0 0 0 0 8629 1314 7854 72270;72271;72272;72273;72274;72275;72276;72277 57317;57318;57319;57320;57321;57322;57323 57317 4 DPGVLDRMMK 2 Oxidation (M) 1192.558 0.55802872 1314 P31949 S100A11 Protein S100-A11;Protein S100-A11, N-terminally processed yes yes 0 2 1 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 1 3 2 24.403 20.547 2;3 0.00016231 28350 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 140.14 94.011 533710000 34026000 251930000 247760000 0 0 0 0 0 0 0 0 0 0 0 0 8630 1314 7854 72278;72279;72280;72281;72282;72283 57324;57325;57326;57327;57328;57329;57330;57331 57328 1963;1964 4 DPGVLDRMMK Oxidation (M) 1176.5631 0.5631141 1314 P31949 S100A11 Protein S100-A11;Protein S100-A11, N-terminally processed yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 1.91 0.287 1 10 5 2 4 47.746 43.405 2;3 0.017245 95024 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 118.5 89.394 1054500000 451090000 266120000 337330000 0 0 0 0 0 0 0 0 0 0 0 0 8631 1314 7854 72284;72285;72286;72287;72288;72289;72290;72291;72292;72293;72294 57332;57333;57334;57335;57336 57332 1963;1964 1 DPGVLQPVPLGGR Unmodified 1303.7248 0.72483478 240 O15014 ZNF609 Zinc finger protein 609 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.616 72.684 2 4.8685E-05 83399 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 88.496 62.557 91657000 0 0 0 4312200 5278400 5759800 6244600 5528200 5946500 10935000 8648300 10544000 6968800 8525700 12966000 8632 240 7855 72295;72296;72297;72298;72299;72300;72301;72302;72303;72304;72305;72306 57337;57338;57339;57340;57341;57342;57343;57344;57345;57346;57347;57348 57339 12 DPHAEEFEDK Unmodified 1215.5044 0.50439648 3418 Q8NDI1 EHBP1 EH domain-binding protein 1 yes yes 0 0 0 By MS/MS 3 0 1 1 23.534 19.571 2 0.033495 24333 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 57.598 48.011 1487900 0 1487900 0 0 0 0 0 0 0 0 0 0 0 0 0 8633 3418 7856 72307 57349 57349 1 DPIDRIIEFVPTK Unmodified 1541.8453 0.84534384 2231 Q13085 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes yes 0 0 1 By MS/MS 2 0 1 1 93.041 84.91 3 0.020158 110024 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.03 30.972 7287800 7287800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8634 2231 7857 72308 57350 57350 1 DPIDVNYEK Unmodified 1091.5135 0.5135046 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 42.989 43.051 2 0.0033477 48766 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 93.649 79.492 206730000 0 0 0 17531000 9636600 0 15520000 17884000 27427000 17832000 45824000 0 26896000 28174000 0 8635 894 7858 72309;72310;72311;72312;72313;72314;72315;72316;72317;72318 57351;57352;57353;57354;57355;57356;57357;57358;57359 57358 8 DPIPYLPPLEK Unmodified 1280.7016 0.70163972 868 P08621 SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 84.697 84.747 2 0.0019204 98200 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 70.1 61.88 134770000 0 0 0 8933700 11386000 14017000 15835000 17734000 12435000 13313000 15480000 14453000 11185000 0 0 8636 868 7859 72319;72320;72321;72322;72323;72324;72325;72326;72327;72328 57360;57361;57362;57363;57364;57365;57366;57367 57360 8 DPITEFVECLYVNFDFDGAQK Unmodified 2506.1362 0.13624207 1809 P60228 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 0 0 0 By MS/MS By MS/MS 2.4 0.49 3 2 3 2 105.32 99.656 2;3 1.1555E-12 125006 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 128.22 122.14 32796000 28299000 4497800 0 0 0 0 0 0 0 0 0 0 0 0 0 8637 1809 7860 72329;72330;72331;72332;72333 57368;57369;57370;57371;57372 57372 5 DPIVANAAYR Unmodified 1088.5615 0.56145784 2823 Q5VW36 FOCAD Focadhesin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 43.021 43.206 2 0.001017 48067 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 110.67 70.717 163740000 0 0 0 13484000 16503000 15161000 0 16871000 10762000 29435000 14972000 17887000 8617700 7540100 12508000 8638 2823 7861 72334;72335;72336;72337;72338;72339;72340;72341;72342;72343;72344 57373;57374;57375;57376;57377;57378;57379;57380;57381;57382;57383;57384 57377 12 DPLEEMAQLSSCDSPDTPETDDSIEGHGASLPSKK Unmodified 3742.6462 0.64619421 2913 Q6P0Q8 MAST2 Microtubule-associated serine/threonine-protein kinase 2 yes yes 0 0 1 By MS/MS 10 0 1 1 36.412 36.419 7 0.044484 40334 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 4.3584 4.1596 8137600 0 0 0 0 0 8137600 0 0 0 0 0 0 0 0 0 8639 2913 7862 72345 57385 57385 1 DPLGAEAAPGALGQVK Unmodified 1492.7886 0.78855725 3602 Q8WYQ5 DGCR8 Microprocessor complex subunit DGCR8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 67.107 66.729 2 0.00032718 82817 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.803 75.628 60170000 0 21360000 0 0 0 2730000 0 3117300 4876400 3746600 3751700 5470600 5089800 4149700 5878000 8640 3602 7863 72346;72347;72348;72349;72350;72351;72352;72353;72354;72355;72356 57386;57387;57388;57389;57390;57391;57392;57393;57394 57389 9 DPLLASGTDGVGTK Unmodified 1329.6776 0.67760981 1134 P22102 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.53 3 2 11 2 3 1 1 1 1 1 1 1 1 1 1 1 51.761 49.997 2 1.7978E-23 60212 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 157.68 136.21 2235600000 69244000 1667200000 0 21180000 18770000 47173000 0 31069000 26833000 41033000 57458000 64168000 43838000 38539000 109180000 8641 1134 7864 72357;72358;72359;72360;72361;72362;72363;72364;72365;72366;72367;72368;72369;72370;72371;72372 57395;57396;57397;57398;57399;57400;57401;57402;57403;57404;57405;57406;57407;57408;57409;57410;57411;57412;57413;57414;57415 57405 21 DPLLDDHGDFIR Unmodified 1411.6732 0.67319314 5014 Q9UM54 MYO6 Unconventional myosin-VI yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 70.577 70.71 3 0.017272 81314 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 43.382 26.015 42235000 0 0 0 0 1390200 4654100 2027900 3060200 4027200 3699400 4505400 5520400 2353400 2414900 8581800 8642 5014 7865 72373;72374;72375;72376;72377;72378;72379;72380;72381;72382;72383 57416 57416 0 DPLLVEVSR Unmodified 1026.571 0.5709599 2818 Q5VUA4 ZNF318 Zinc finger protein 318 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 65.868 65.824 2 0.030461 75088 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 48.157 34.51 21015000 0 0 0 1574700 1635900 3154700 2251900 0 2370700 3512900 3572500 0 2941500 0 0 8643 2818 7866 72384;72385;72386;72387;72388;72389;72390;72391 57417;57418 57418 2 DPLNPIK Unmodified 795.44905 0.44905385 2505 Q15181 PPA1 Inorganic pyrophosphatase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.31 3.1 1 2 10 1 2 1 1 1 1 1 1 1 1 1 1 40.786 39.736 2 0.023373 45009 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 88.643 38.618 3999900000 7329500 3586500000 0 13358000 9287000 10331000 14327000 0 9778400 16709000 81973000 61521000 0 53896000 134900000 8644 2505 7867 72392;72393;72394;72395;72396;72397;72398;72399;72400;72401;72402;72403;72404 57419;57420;57421;57422;57423;57424;57425;57426;57427;57428;57429;57430 57419 12 DPLPPLDPQAIK Unmodified 1302.7184 0.71835242 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 78.665 78.142 2 0.0024145 90051 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 63.184 39.029 300190000 0 167420000 0 5929300 5662900 22817000 6720900 7736400 11023000 11726000 9997400 10534000 9737800 12913000 17975000 8645 3641 7868 72405;72406;72407;72408;72409;72410;72411;72412;72413;72414;72415;72416;72417;72418 57431;57432;57433;57434;57435;57436;57437;57438;57439 57433 8 DPLPPLDPQAIKPILK Unmodified 1754.0342 0.034207247 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.74 2 1 17 2 1 1 1 2 1 1 1 2 2 1 1 2 2 86.999 86.541 2;3 2.1759E-06 100495 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 63.128 62.464 575490000 0 218480000 3731700 4070500 11532000 27909000 12731000 27639000 22442000 43911000 30988000 34845000 19412000 33141000 84658000 8646 3641 7869 72419;72420;72421;72422;72423;72424;72425;72426;72427;72428;72429;72430;72431;72432;72433;72434;72435;72436;72437;72438 57440;57441;57442;57443;57444;57445;57446;57447;57448;57449;57450;57451 57449 10 DPLSANHSLK Unmodified 1080.5564 0.55637247 2248 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26.899 26.531 2 2.2151E-07 32954 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 153.08 118.28 278370000 0 139000000 30999000 5060200 3817500 21526000 5393700 5563300 7840000 9923600 7310000 13939000 6053700 8274100 13667000 8647 2248 7870 72439;72440;72441;72442;72443;72444;72445;72446;72447;72448;72449;72450;72451;72452 57452;57453;57454;57455;57456;57457;57458;57459;57460;57461;57462;57463;57464;57465 57460 13 DPLSANHSLKPLPSVPEEK Unmodified 2057.0793 0.079319539 2248 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.18 3.82 6 11 2 1 3 1 1 1 1 1 1 1 1 1 1 1 65.28 63.367 3;4 4.7509E-31 71871 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 82.367 74.146 556790000 131900000 92016000 150630000 10320000 6342800 10885000 11924000 11896000 0 22113000 18550000 29591000 10965000 18008000 31650000 8648 2248 7871 72453;72454;72455;72456;72457;72458;72459;72460;72461;72462;72463;72464;72465;72466;72467;72468;72469 57466;57467;57468;57469;57470;57471;57472;57473;57474;57475;57476;57477;57478;57479;57480;57481;57482;57483 57474 15 DPLSEITEQEK Unmodified 1287.6194 0.61942623 1452 P42336 PIK3CA Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform yes yes 0 0 0 By MS/MS 2 0 1 1 9.1866 5.548 3 0.0016993 9223 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.699 43.069 32612000 32612000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8649 1452 7872 72470 57484 57484 1 DPLTHTSNSLPR Unmodified 1336.6735 0.67352749 4848 Q9UBP0 SPAST Spastin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 38.466 38.817 3 0.046066 43172 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 25.141 20.727 55940000 0 0 0 0 0 0 5058900 5613400 4154200 7730700 9926400 7868700 6845800 0 8741800 8650 4848 7873 72471;72472;72473;72474;72475;72476;72477;72478 57485 57485 1 DPLYIGLR Unmodified 945.52837 0.5283668 1534 P48163 ME1 NADP-dependent malic enzyme yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 73.033 72.888 2 0.0071277 84714 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 124.89 80.195 32891000 0 0 0 21546000 0 0 0 0 0 0 0 11345000 0 0 0 8651 1534 7874 72479;72480 57486;57487 57487 1 DPNCVGTVLASRPHTLDGR Unmodified 2064.0171 0.017070408 3818 Q96EP5 DAZAP1 DAZ-associated protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 59.941 60.109 4 0.0022283 67690 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.933 35.029 140650000 0 0 0 2866400 0 8070700 0 6440100 9746700 11175000 9350100 21600000 6512200 17713000 47175000 8652 3818 7875 72481;72482;72483;72484;72485;72486;72487;72488;72489;72490 57488;57489;57490 57488 3 DPNEPQKPVSAYALFFR Unmodified 1977.9949 0.99486163 592 O94842;O15405;Q96NM4;O94900 TOX4;TOX3;TOX2;TOX TOX high mobility group box family member 4;TOX high mobility group box family member 3;TOX high mobility group box family member 2;Thymocyte selection-associated high mobility group box protein TOX yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 85.32 85.455 3 0.00019851 98756 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.337 59.617 34945000 0 0 0 0 0 3888100 0 4781500 3856400 0 0 4733900 2107000 0 15578000 8653 592 7876 72491;72492;72493;72494;72495;72496 57491;57492;57493;57494;57495;57496 57492 6 DPNFVHSGHGGAVAGK Unmodified 1548.7433 0.74333839 2952 Q6PI98 INO80C INO80 complex subunit C yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 29.827 25.414 3 0.0003729 35468 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.335 49.803 21384000 11504000 0 9879500 0 0 0 0 0 0 0 0 0 0 0 0 8654 2952 7877 72497;72498 57497;57498 57497 2 DPNIVIAK Unmodified 868.50182 0.5018177 1270 P30101 PDIA3 Protein disulfide-isomerase A3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.56 1 1 13 2 1 1 1 1 1 1 1 1 1 2 1 1 43.886 43.355 2 0.0067966 48652 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 96.492 73.562 3682600000 0 3003300000 0 25444000 23825000 23154000 29707000 33372000 21157000 29929000 97924000 87347000 52355000 64027000 191110000 8655 1270 7878 72499;72500;72501;72502;72503;72504;72505;72506;72507;72508;72509;72510;72511;72512;72513 57499;57500;57501;57502;57503;57504;57505;57506;57507;57508;57509 57504 6 DPNLWTVK Unmodified 971.50763 0.50763136 136 O00267 SUPT5H Transcription elongation factor SPT5 yes yes 0 0 0 By MS/MS 10 0 1 1 62.24 62.593 2 0.052577 71487 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 69.812 38.583 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8656 136 7879 72514 57510 57510 1 DPNNDFRK Unmodified 1004.4676 0.46755746 4106 Q9BRA2 TXNDC17 Thioredoxin domain-containing protein 17 yes yes 0 0 1 By matching By MS/MS By MS/MS 2 0 3 1 1 1 11.21 8.0524 2 0.040742 11108 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 155.88 79.03 291990000 56750000 218480000 16768000 0 0 0 0 0 0 0 0 0 0 0 0 8657 4106 7880 72515;72516;72517 57511 57511 0 DPNNLFMVR Oxidation (M) 1120.5335 0.53352853 2252 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.179 64.198 2 0.0023918 73270 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 110.12 92.734 342590000 0 0 0 25388000 37679000 45791000 18732000 14446000 11570000 52093000 65996000 70892000 0 0 0 8658 2252 7881 72518;72519;72520;72521;72522;72523;72524;72525;72526;72527;72528;72529 57512;57513;57514;57515;57516;57517;57518;57519;57520;57521;57522;57523 57517 3659 12 DPNNLLNDWSQK Unmodified 1442.679 0.6790068 130 O00232 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.18 3.29 3 1 13 1 2 1 1 1 1 1 1 1 1 1 2 1 1 1 75.243 74.176 2 2.5512E-44 91415 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 233.54 215.23 960620000 14730000 517780000 2759300 23574000 30357000 31774000 10225000 14543000 10911000 56538000 72419000 84010000 14937000 28378000 47685000 8659 130 7882 72530;72531;72532;72533;72534;72535;72536;72537;72538;72539;72540;72541;72542;72543;72544;72545;72546 57524;57525;57526;57527;57528;57529;57530;57531;57532;57533;57534;57535;57536;57537 57526 12 DPNNPYDK Unmodified 961.41412 0.4141249 2411 Q14527 HLTF Helicase-like transcription factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 13.111 13.411 2 0.022428 12586 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 92.491 69.999 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8660 2411 7883 72547;72548;72549 57538;57539;57540 57538 3 DPNQFTISR Unmodified 1076.5251 0.52507234 4296;2550 Q15583;Q9GZN2 TGIF1;TGIF2 Homeobox protein TGIF1;Homeobox protein TGIF2 no no 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 43.192 43.777 2 0.010525 48484 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.191 48.529 115480000 0 0 0 0 0 0 0 0 0 0 0 53830000 0 32387000 29258000 8661 2550;4296 7884 72550;72551;72552 57541;57542 57542 2 DPNQFTISRR Unmodified 1232.6262 0.62618337 4296;2550 Q15583;Q9GZN2 TGIF1;TGIF2 Homeobox protein TGIF1;Homeobox protein TGIF2 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 34.968 35.057 3 0.016503 38075 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 32.008 17.773 55894000 0 0 0 3040300 2954900 12207000 4943600 4999300 5666900 8020400 7633400 6428000 0 0 0 8662 2550;4296 7885 72553;72554;72555;72556;72557;72558;72559;72560;72561 57543;57544 57543 2 DPNSATATAPPSPLK Unmodified 1465.7413 0.7412727 3657 Q92766 RREB1 Ras-responsive element-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.817 46.983 2 4.784E-23 53004 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 146.36 129.42 137570000 0 0 0 10482000 8134800 13042000 10918000 7588600 7897700 11541000 13835000 15081000 10671000 12601000 15777000 8663 3657 7886 72562;72563;72564;72565;72566;72567;72568;72569;72570;72571;72572;72573 57545;57546;57547;57548;57549;57550;57551;57552;57553;57554;57555;57556;57557 57554 13 DPNSPLYSVK Unmodified 1118.5608 0.56078914 4655;5016 Q9NUU7;Q9UMR2 DDX19A;DDX19B ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX19B no no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 47.556 47.588 2 0.001832 53461 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 96.143 74.679 69630000 0 0 0 6812900 6130400 0 8726900 8651100 5279600 0 13074000 0 10335000 10620000 0 8664 4655;5016 7887 72574;72575;72576;72577;72578;72579;72580;72581 57558;57559;57560;57561;57562;57563 57561 6 DPNTQSVGNPQR Unmodified 1311.6167 0.61674089 525 O75616 ERAL1 GTPase Era, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 16.196 16.443 2 0.0020713 14957 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 79.148 73.782 20231000 0 0 0 1269700 0 2008100 0 1480000 0 1868000 2985600 3329300 1449600 2182600 3657800 8665 525 7888 72582;72583;72584;72585;72586;72587;72588;72589;72590 57564;57565;57566;57567;57568;57569;57570 57567 7 DPNTYFIVGTAMVYPEEAEPK Oxidation (M) 2386.1039 0.10387931 2608 Q16531 DDB1 DNA damage-binding protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By matching 10 0 5 1 1 1 1 1 85.828 85.97 2 3.8376E-12 99808 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 83.729 78.746 20138000 0 0 0 0 0 0 0 0 0 2601700 3884300 5044500 0 2375700 6232200 8666 2608 7889 72591;72592;72593;72594;72595 57571;57572;57573 57573 4249 3 DPNTYFIVGTAMVYPEEAEPK Unmodified 2370.109 0.10896469 2608 Q16531 DDB1 DNA damage-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 2 2 95.618 89.526 2;3 1.7541E-58 111941 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 169.92 159.29 128540000 46981000 81556000 0 0 0 0 0 0 0 0 0 0 0 0 0 8667 2608 7889 72596;72597;72598;72599 57574;57575;57576;57577;57578;57579 57574 6 DPPANLFEDMDLNK Unmodified 1617.7345 0.73447277 3744 Q96AY3 FKBP10 Peptidyl-prolyl cis-trans isomerase FKBP10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 86.717 85.452 2 1.0014E-29 101848 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 144.1 135.87 569160000 34724000 481560000 1478800 1081700 0 4989500 1844500 3582000 2423400 5016400 6066700 6788600 0 5186100 14415000 8668 3744 7890 72600;72601;72602;72603;72604;72605;72606;72607;72608;72609;72610;72611;72612;72613 57580;57581;57582;57583;57584;57585;57586;57587;57588;57589 57585 6 DPPANLFEDMDLNK Oxidation (M) 1633.7294 0.72938739 3744 Q96AY3 FKBP10 Peptidyl-prolyl cis-trans isomerase FKBP10 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 74.162 73.48 2 3.2281E-12 85092 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 103.44 86.414 157220000 0 102930000 0 0 0 0 0 4096400 3420900 6954000 9168700 7287700 3644500 5360400 14359000 8669 3744 7890 72614;72615;72616;72617;72618;72619;72620;72621;72622;72623 57590;57591;57592;57593;57594;57595;57596;57597 57590 5320 7 DPPAVENYPPPPAPAPTDGSEPAPAPVADGDIPSQFTR Unmodified 3836.817 0.81696343 2750 Q5PRF9 SAMD4B Protein Smaug homolog 2 yes yes 0 0 0 By MS/MS 10 0 1 1 84.494 84.694 3 0.0011019 98191 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 18.93 17.268 5586100 0 0 0 0 0 0 0 0 0 0 5586100 0 0 0 0 8670 2750 7891 72624 57598 57598 1 DPPGVGVAGVAAAPK Unmodified 1304.7089 0.70885036 1462 P42684 ABL2 Abelson tyrosine-protein kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 2 1 1 1 1 1 1 1 1 1 2 56.312 56.426 2 6.7108E-20 63977 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 112.15 93.836 306200000 0 0 0 20027000 24732000 24226000 22826000 20386000 21883000 25684000 34268000 34450000 22648000 18991000 36076000 8671 1462 7892 72625;72626;72627;72628;72629;72630;72631;72632;72633;72634;72635;72636;72637;72638 57599;57600;57601;57602;57603;57604;57605;57606;57607;57608;57609;57610;57611 57601 10 DPPSEANSIQSANATTK Unmodified 1729.8119 0.81187146 3329 Q8N488 RYBP RING1 and YY1-binding protein yes yes 0 0 0 By matching By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 33.047 33.342 2 0.00057637 35748 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.375 41.768 18030000 0 0 0 0 1720200 0 0 0 0 4660600 0 3064500 0 2848800 5736200 8672 3329 7893 72639;72640;72641;72642;72643 57612 57612 1 DPPSWSVLAGHSR Unmodified 1407.6895 0.6895119 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 65.386 65.528 3 0.01115 75675 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 28.727 19.04 104740000 0 0 0 4064200 0 12817000 6873800 5725000 4050400 9978100 10837000 11407000 10613000 7772900 20598000 8673 5187 7894 72644;72645;72646;72647;72648;72649;72650;72651;72652;72653;72654 57613;57614;57615;57616 57616 2 DPPWITLVQAEPK Unmodified 1492.7926 0.79257999 3322 Q8N3F8 MICALL1 MICAL-like protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 93.266 89.208 2 0.00057367 110877 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.465 85.131 10785000 0 10785000 0 0 0 0 0 0 0 0 0 0 0 0 0 8674 3322 7895 72655;72656 57617;57618 57617 2 DPQALSEHLK Unmodified 1136.5826 0.58258722 1313 P31948 STIP1 Stress-induced-phosphoprotein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 36.299 34.913 2 1.5208E-08 45076 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 156.83 136.2 2670700000 172440000 1654300000 146130000 16890000 10977000 15781000 0 21410000 0 0 127020000 113750000 34092000 117440000 240490000 8675 1313 7896 72657;72658;72659;72660;72661;72662;72663;72664;72665;72666;72667;72668;72669 57619;57620;57621;57622;57623;57624;57625;57626;57627;57628;57629;57630;57631;57632;57633;57634;57635;57636;57637;57638;57639;57640 57622 19 DPQDDDDLK Unmodified 1059.4356 0.43564821 3760 Q96BN2 TADA1 Transcriptional adapter 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 14.673 14.816 2 0.036316 14570 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 45.738 41.057 19510000 0 0 0 1414000 1636800 0 0 0 2220800 3770300 3006900 0 3917600 3543100 0 8676 3760 7897 72670;72671;72672;72673;72674;72675;72676 57641 57641 1 DPQDENK Unmodified 844.35628 0.35627567 3854 Q96GG9;Q6PH85 DCUN1D1;DCUN1D2 DCN1-like protein 1;DCN1-like protein 2 yes no 0 0 0 By MS/MS 1 0 1 1 106.12 111.38 2 0.014106 92004 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 149.4 117.34 40074000 40074000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8677 3854 7898 72677 57642 57642 1 DPQDYPDK Unmodified 976.41379 0.41379055 895 P09884 POLA1 DNA polymerase alpha catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9 2.83 1 8 1 1 1 1 1 1 1 1 1 23.837 24.528 2 0.012121 92413 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 101.72 58.807 37922000 16081000 0 0 1089400 1237300 3994200 0 1686700 2105200 3754400 0 2673200 0 0 5301000 8678 895 7899 72678;72679;72680;72681;72682;72683;72684;72685;72686 57643;57644 57644 2 DPQDYPDKK Unmodified 1104.5088 0.50875357 895 P09884 POLA1 DNA polymerase alpha catalytic subunit yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 10.709 7.1396 2 0.0041105 9964 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.66 78.869 32804000 3746800 29057000 0 0 0 0 0 0 0 0 0 0 0 0 0 8679 895 7900 72687;72688 57645 57645 1 DPQFAEDYIFK Unmodified 1371.6347 0.63468237 4323 Q9H0D6 XRN2 5'-3' exoribonuclease 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 82.304 81.188 2 1.9703E-05 93666 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 128.52 106.56 348450000 10835000 94309000 3144400 7352000 12210000 20190000 9585700 14031000 18863000 27729000 20739000 24645000 15969000 21864000 46986000 8680 4323 7901 72689;72690;72691;72692;72693;72694;72695;72696;72697;72698;72699;72700;72701;72702;72703;72704 57646;57647;57648;57649;57650;57651;57652;57653;57654;57655;57656;57657 57655 12 DPQFHSFIITR Unmodified 1359.6935 0.69353465 3017 Q6ZUT9 DENND5B DENN domain-containing protein 5B yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 72.289 72.329 3 0.039692 83284 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 27.862 19.161 59027000 0 0 0 4004900 2154100 6914500 2657700 7700000 4033500 5630200 4205600 8682700 8720500 4323200 0 8681 3017 7902 72705;72706;72707;72708;72709;72710;72711;72712;72713;72714;72715 57658 57658 1 DPQFSLISATIK Unmodified 1318.7133 0.71326704 554 O75886 STAM2 Signal transducing adapter molecule 2 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 87.459 83.962 2 9.8738E-13 104259 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 151.79 129.7 28680000 0 27153000 1526300 0 0 0 0 0 0 0 0 0 0 0 0 8682 554 7903 72716;72717;72718 57659;57660 57659 2 DPQGLGLHFYK Unmodified 1273.6455 0.64552182 533 O75694 NUP155 Nuclear pore complex protein Nup155 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 76.244 68.114 2 0.00077321 89784 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.573 67.175 14811000 14811000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8683 533 7904 72719;72720 57661;57662 57662 2 DPQLVPILIEAAR Unmodified 1433.8242 0.82421447 2569 Q15738 NSDHL Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 93.48 93.586 2 0.037488 109018 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 40.589 31.726 12673000 0 0 0 0 907580 1723200 1092100 1065500 1210500 0 1908200 1513800 0 1078900 2173700 8684 2569 7905 72721;72722;72723;72724;72725;72726;72727;72728;72729 57663;57664 57664 2 DPQQEDFLQGR Unmodified 1331.6106 0.61059288 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 50.515 51.018 2 0.0015109 57732 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 72.243 51.406 60452000 0 0 0 0 0 0 0 0 0 0 0 0 24718000 0 35733000 8685 2775 7906 72730;72731 57665;57666;57667;57668 57668 4 DPQQPAQQQQPAQQPK Unmodified 1815.8864 0.88637381 555 O75909 CCNK Cyclin-K yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 17.526 17.714 2;3 0.00020052 17520 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 71.555 59.941 184270000 0 0 0 13000000 15676000 13406000 9707500 10829000 10181000 16696000 12154000 25637000 17503000 15046000 24433000 8686 555 7907 72732;72733;72734;72735;72736;72737;72738;72739;72740;72741;72742;72743;72744;72745;72746;72747;72748;72749;72750;72751;72752;72753;72754;72755 57669;57670;57671;57672;57673;57674;57675;57676;57677;57678;57679;57680;57681;57682;57683;57684 57679 16 DPQRSGDLYTQAAEAAMEAMK Unmodified 2282.0307 0.030731141 150 O00418 EEF2K Eukaryotic elongation factor 2 kinase yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 91.853 88.161 3 8.8698E-30 109525 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.689 78.253 30776000 0 29922000 854550 0 0 0 0 0 0 0 0 0 0 0 0 8687 150 7908 72756;72757 57685 57685 1 DPQTEEFK Unmodified 992.44509 0.44509068 360 O43719 HTATSF1 HIV Tat-specific factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 22.13 22.34 2 0.0068825 22161 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 92.47 61.181 26720000 0 0 0 0 1524900 2666400 1802800 1838700 0 0 3770700 5868300 5514300 3733500 0 8688 360 7909 72758;72759;72760;72761;72762;72763;72764;72765 57686;57687;57688 57686 3 DPQVLFAGYK Unmodified 1136.5866 0.58660996 1687 P52435;Q9H1A7;Q9GZM3 POLR2J;POLR2J3;POLR2J2 DNA-directed RNA polymerase II subunit RPB11-a;DNA-directed RNA polymerase II subunit RPB11-b2;DNA-directed RNA polymerase II subunit RPB11-b1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 72.263 71.537 2 0.00091175 82530 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 114.89 93.594 223000000 0 133490000 3212400 0 3646000 5083900 6316400 6392300 4298700 8238300 9827900 10178000 7949200 6895400 17469000 8689 1687 7910 72766;72767;72768;72769;72770;72771;72772;72773;72774;72775;72776;72777;72778;72779 57689;57690;57691;57692;57693;57694;57695;57696;57697;57698;57699;57700;57701 57696 13 DPRTFEGIDPK Unmodified 1273.6303 0.63026569 1620 P50395 GDI2 Rab GDP dissociation inhibitor beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 1 3 1 51.068 45.574 2;3 0.012503 56900 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 55.258 41 925800000 128580000 706430000 90792000 0 0 0 0 0 0 0 0 0 0 0 0 8690 1620 7911 72780;72781;72782;72783;72784 57702;57703;57704 57702 1 DPRTFEGIDPKK Unmodified 1401.7252 0.72522871 1620 P50395 GDI2 Rab GDP dissociation inhibitor beta yes yes 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 43.243 37.976 3 0.0049434 47795 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 86.699 68.509 864920000 392570000 0 472350000 0 0 0 0 0 0 0 0 0 0 0 0 8691 1620 7912 72785;72786 57705;57706 57706 2 DPSEEAAVLQYASLVGQK Unmodified 1903.9527 0.95272204 636 O95260 ATE1 Arginyl-tRNA--protein transferase 1 yes yes 0 0 0 By MS/MS 2.5 0.5 2 2 4 92.182 88.117 2;3 2.5337E-07 109186 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.04 114.79 176820000 0 176820000 0 0 0 0 0 0 0 0 0 0 0 0 0 8692 636 7913 72787;72788;72789;72790 57707;57708;57709;57710 57709 4 DPSFRPTAK Unmodified 1017.5243 0.52434406 4811 Q9P289 STK26 Serine/threonine-protein kinase 26 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 22.766 21.877 2 0.0032882 21495 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 131.22 84.797 1111600000 522540000 132840000 109680000 13524000 13636000 37728000 24706000 12663000 17184000 31949000 48145000 39448000 25989000 28778000 52751000 8693 4811 7914 72791;72792;72793;72794;72795;72796;72797;72798;72799;72800;72801;72802;72803;72804;72805;72806 57711;57712;57713;57714 57711 3 DPSGASNPSADSPLHR Unmodified 1606.7336 0.73356156 1767 P55317 FOXA1 Hepatocyte nuclear factor 3-alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.164 31.353 3 2.936E-28 34118 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 109.64 103.93 265480000 0 0 0 10895000 13308000 22333000 23221000 20349000 21211000 22793000 28074000 30539000 20084000 19777000 32895000 8694 1767 7915 72807;72808;72809;72810;72811;72812;72813;72814;72815;72816;72817;72818 57715;57716;57717;57718;57719;57720;57721;57722;57723;57724;57725;57726;57727;57728 57718 14 DPSGLLISVIR Unmodified 1168.6816 0.68157298 3733 Q96A65 EXOC4 Exocyst complex component 4 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 89.867 90.006 2 0.0057959 104280 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 70.056 60.842 49232000 0 0 0 0 0 4634500 3631700 3914700 4411400 5831800 5976000 5389300 3913600 3792200 7736200 8695 3733 7916 72819;72820;72821;72822;72823;72824;72825;72826;72827;72828 57729;57730;57731;57732 57732 3 DPSIHQAR Unmodified 922.46208 0.46207815 4034 Q99614 TTC1 Tetratricopeptide repeat protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 7.9383 8.1119 2 0.0099634 5872 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 81.191 34.765 25499000 0 0 0 1488300 0 0 1603300 1281000 0 1766200 6120600 3167900 2175100 2351000 5545800 8696 4034 7917 72829;72830;72831;72832;72833;72834;72835;72836;72837 57733;57734;57735;57736;57737;57738 57735 6 DPSLSDSSTVGLQRELSK Unmodified 1917.9643 0.96434936 350 O43663 PRC1 Protein regulator of cytokinesis 1 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 69.154 63.889 3 0.012008 77814 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 30.536 24.373 19726000 0 19726000 0 0 0 0 0 0 0 0 0 0 0 0 0 8697 350 7918 72838;72839 57739 57739 1 DPSLTEPVIR Unmodified 1125.603 0.60298831 2610 Q16537 PPP2R5E Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 60.226 60.326 2 0.002807 68963 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 79.906 57.947 23000000 0 0 0 0 1424500 5510300 0 2380200 0 3912400 0 0 0 3406400 6366400 8698 2610 7919 72840;72841;72842;72843;72844;72845;72846;72847;72848 57740;57741;57742;57743;57744;57745;57746;57747;57748 57745 9 DPSLVVAGEALDALFDVFADGK Unmodified 2248.1263 0.12632931 3100 Q7Z4Q2 HEATR3 HEAT repeat-containing protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.44 0.497 5 4 4 4 1 107.04 102.28 2;3 3.7693E-27 127283 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 113.17 104.81 82032000 57924000 21498000 2610300 0 0 0 0 0 0 0 0 0 0 0 0 8699 3100 7920 72849;72850;72851;72852;72853;72854;72855;72856;72857 57749;57750;57751;57752;57753;57754;57755;57756 57755 7 DPSNLQGK Unmodified 857.4243 0.42429566 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS 1 0 1 1 106.46 111.72 2 0.0039595 92394 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 118.89 83.694 45252000 45252000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8700 2344 7921 72858 57757 57757 1 DPSQIDNNEPYMK Unmodified 1549.6719 0.67187251 2273 Q13347 EIF3I Eukaryotic translation initiation factor 3 subunit I yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 44.809 45.29 2 0.003682 50054 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.549 42.177 59043000 0 0 0 0 0 0 0 0 0 0 16965000 0 0 17100000 24977000 8701 2273 7922 72859;72860;72861 57758 57758 1 DPSQLNSK Unmodified 887.43486 0.43486035 4726 Q9NXG2 THUMPD1 THUMP domain-containing protein 1 yes yes 0 0 0 By MS/MS 1 0 1 1 106.43 111.7 2 0.0089743 92366 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 114.5 90.525 35821000 35821000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8702 4726 7923 72862 57759 57759 1 DPSQQELPR Unmodified 1068.52 0.51998696 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.363 27.561 2 8.3566E-210 28509 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 250.08 233.31 396450000 0 0 0 15817000 16192000 60342000 22271000 18325000 11543000 43870000 42286000 48019000 24385000 31884000 61509000 8703 1565 7924 72863;72864;72865;72866;72867;72868;72869;72870;72871;72872;72873;72874 57760;57761;57762;57763;57764;57765;57766;57767;57768;57769;57770;57771;57772 57769 12 DPSQRPSMEEIVK Unmodified 1514.7399 0.73989249 318 O43318 MAP3K7 Mitogen-activated protein kinase kinase kinase 7 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 53.915 48.568 3 0.019711 63031 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 43.297 33.509 26797000 0 26797000 0 0 0 0 0 0 0 0 0 0 0 0 0 8704 318 7925 72875;72876 57773 57773 1 DPSRVGDSQNPLLSDGDLSTMIGK Oxidation (M) 2517.2017 0.20169587 2034 Q00403 GTF2B Transcription initiation factor IIB yes yes 0 1 1 By MS/MS 3 0 1 1 78.917 75.546 3 0.00019289 90598 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 54.521 50.266 18236000 0 18236000 0 0 0 0 0 0 0 0 0 0 0 0 0 8705 2034 7926 72877 57774;57775 57774 3292 2 DPSRVGDSQNPLLSDGDLSTMIGK Unmodified 2501.2068 0.20678125 2034 Q00403 GTF2B Transcription initiation factor IIB yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 87.311 81.635 3 0.00031537 99522 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 57.578 54.929 12384000 6310700 6073400 0 0 0 0 0 0 0 0 0 0 0 0 0 8706 2034 7926 72878;72879 57776;57777 57776 2 DPSSDLHLLLDQSK Unmodified 1566.789 0.78895118 5196 Q9Y4E5 ZNF451 Zinc finger protein 451 yes yes 0 0 0 By MS/MS 2 0 1 1 84.799 80.055 3 0.00047543 99516 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.281 63.843 40279000 0 40279000 0 0 0 0 0 0 0 0 0 0 0 0 0 8707 5196 7927 72880 57778 57778 1 DPSSDWEMSQSSIK Oxidation (M) 1611.6723 0.67226644 2226 Q13042 CDC16 Cell division cycle protein 16 homolog yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 8.86 2.8 1 6 1 1 1 1 1 1 1 47.164 47.445 2 9.4414E-18 57218 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.14 130.71 25287000 0 0 0 0 0 3636900 0 0 2280600 4583500 0 7623500 4113200 3049400 0 8708 2226 7928 72881;72882;72883;72884;72885;72886;72887 57779;57780;57781;57782;57783 57781 3614 5 DPSSDWEMSQSSIK Unmodified 1595.6774 0.67735182 2226 Q13042 CDC16 Cell division cycle protein 16 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 62.429 56.536 2 4.1946E-59 72423 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 198.81 173.96 50777000 0 50777000 0 0 0 0 0 0 0 0 0 0 0 0 0 8709 2226 7928 72888 57784 57784 1 DPSVLIK Unmodified 770.4538 0.45380487 3255 Q8IX12 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.411 43.586 2 0.03326 47367 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 72.138 49.403 494340000 0 0 0 20590000 20334000 42528000 33986000 34594000 45145000 42090000 42207000 44451000 44776000 48751000 74889000 8710 3255 7929 72889;72890;72891;72892;72893;72894;72895;72896;72897;72898;72899;72900 57785;57786 57785 2 DPSVVVR Unmodified 770.42865 0.42865276 2457 Q14974 KPNB1 Importin subunit beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 26.141 26.36 2 0.02229 28258 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 105.2 46.955 503560000 0 0 0 31986000 0 69100000 35939000 37446000 21779000 67002000 0 64702000 54549000 0 121050000 8711 2457 7930 72901;72902;72903;72904;72905;72906;72907;72908;72909 57787;57788;57789;57790 57787 2 DPTAALRK Unmodified 870.49232 0.49231565 3950 Q96PZ0 PUS7 Pseudouridylate synthase 7 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 22.879 18.944 2 0.010601 24142 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 134.06 28.856 128570000 26585000 83792000 18189000 0 0 0 0 0 0 0 0 0 0 0 0 8712 3950 7931 72910;72911;72912 57791 57791 0 DPTAEQFQEELEK Unmodified 1562.71 0.71003215 1310 P31944 CASP14 Caspase-14;Caspase-14 subunit p17, mature form;Caspase-14 subunit p10, mature form;Caspase-14 subunit p20, intermediate form;Caspase-14 subunit p8, intermediate form yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 68.829 68.509 2 0.00045577 79224 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 94.297 87.408 17070000 0 0 0 10764000 2179300 0 0 4126600 0 0 0 0 0 0 0 8713 1310 7932 72913;72914;72915;72916 57792;57793;57794 57794 3 DPTDALSYMTIQQK Unmodified 1609.7658 0.76577289 3991 Q96SI9 STRBP Spermatid perinuclear RNA-binding protein yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 6.6825 6.8458 3 0.024283 4901 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 18.638 10.594 18039000 0 0 0 494050 0 0 595420 0 0 6108200 2729800 2744600 1485800 2411800 1469800 8714 3991 7933 72917;72918;72919;72920;72921;72922;72923;72924 57795 57795 1 DPTEEATPTPFGK Unmodified 1388.646 0.64597533 4370 Q9H2M9 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 51.268 51.45 2 2.3935E-26 58195 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 164.33 154.92 59887000 0 0 0 0 0 12931000 4128200 0 7599100 11752000 9135200 0 0 14342000 0 8715 4370 7934 72925;72926;72927;72928;72929;72930;72931;72932;72933;72934 57796;57797;57798;57799;57800;57801;57802;57803;57804;57805;57806 57797 11 DPTGASIALFTAR Unmodified 1318.6881 0.68811492 1479 P43378 PTPN9 Tyrosine-protein phosphatase non-receptor type 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 81.141 81.029 2 0.00072561 93977 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 81.865 63.553 7752400 0 0 0 1111100 0 0 0 0 0 0 6641200 0 0 0 0 8716 1479 7935 72935;72936;72937 57807;57808;57809 57809 3 DPTLGMSCPPPAFVEQSFLQK Unmodified 2348.1181 0.11808959 3361 Q8N6R0 METTL13 Methyltransferase-like protein 13 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 94.571 90.519 3 1.0019E-23 112133 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.18 101.23 58932000 0 58932000 0 0 0 0 0 0 0 0 0 0 0 0 0 8717 3361 7936 72938;72939 57810;57811 57810 2 DPTLLDNFLDEIIAFQADK Unmodified 2177.0892 0.089215523 3663 Q92797 SYMPK Symplekin yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 105.86 100.34 3 1.8022E-111 125547 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 161.86 158.31 25275000 18404000 6870600 0 0 0 0 0 0 0 0 0 0 0 0 0 8718 3663 7937 72940;72941;72942 57812;57813 57813 2 DPTNIQSK Unmodified 901.45051 0.45051041 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS 1 0 1 1 106.45 111.72 2 0.0078919 92399 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 137.42 94.509 25780000 25780000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8719 2344 7938 72943 57814 57814 1 DPTNLQGK Unmodified 871.43995 0.43994572 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 7.75 3.9 1 3 1 1 1 1 43.624 45.275 2 0.010416 92508 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 133.9 101.97 43643000 38609000 0 0 2894000 2140300 0 0 0 0 0 0 0 0 0 0 8720 2344 7939 72944;72945;72946;72947 57815;57816;57817 57816 3 DPTSLLGVLQAEADSTSEGLEDAVHSR Unmodified 2796.3414 0.34136048 2646 Q27J81 INF2 Inverted formin-2 yes yes 0 0 0 By MS/MS 2 0 1 1 99.797 91.667 3 5.2915E-105 118134 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 146.2 138.84 19489000 19489000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8721 2646 7940 72948 57818 57818 1 DPTVSQTFMLDR Unmodified 1408.6657 0.66566492 4973 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 73.594 73.753 2 0.00090444 85046 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 112.89 101.74 62599000 0 0 0 0 0 9603000 0 7404200 4906000 0 0 0 7760400 12974000 19952000 8722 4973 7941 72949;72950;72951;72952;72953;72954;72955;72956;72957 57819;57820;57821;57822;57823;57824;57825;57826;57827 57820 9 DPVADPNK Unmodified 854.4134 0.41339662 1481 P43490 NAMPT Nicotinamide phosphoribosyltransferase yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.25 2.49 1 11 1 1 1 1 1 1 1 1 1 1 1 1 17.829 18.382 2 0.0024059 92567 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 126.04 96.659 63014000 36952000 0 0 915480 506750 1303700 1105400 1249300 822880 1045600 13608000 0 922480 1312200 3270400 8723 1481 7942 72958;72959;72960;72961;72962;72963;72964;72965;72966;72967;72968;72969 57828;57829 57829 2 DPVEIQTLVNK Unmodified 1254.682 0.68196691 4526 Q9HD34 LYRM4 LYR motif-containing protein 4 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 73.747 69.195 2 1.799E-16 86779 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 167.12 138.16 69227000 0 69227000 0 0 0 0 0 0 0 0 0 0 0 0 0 8724 4526 7943 72970;72971 57830 57830 1 DPVEVAQPSEVLR Unmodified 1437.7464 0.74635808 1322 P32519 ELF1 ETS-related transcription factor Elf-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 66.5 66.601 2 1.009E-05 76294 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 107.24 97.811 53210000 0 0 0 3957200 0 7139300 4472100 6042300 0 0 8092200 0 7590900 6090000 9826300 8725 1322 7944 72972;72973;72974;72975;72976;72977;72978;72979 57831;57832;57833;57834;57835;57836;57837;57838;57839;57840;57841 57835 11 DPVHTVSLQQFIYEK Unmodified 1802.9203 0.9202997 4919 Q9UI26 IPO11 Importin-11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8 3.46 3 9 1 1 1 1 1 1 1 1 1 1 1 1 83.249 82.075 3 1.0406E-40 102926 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.83 99.16 141550000 46838000 37401000 11384000 0 0 8053700 1951600 3804900 2840100 6185900 2953300 4504000 2010500 0 13625000 8726 4919 7945 72980;72981;72982;72983;72984;72985;72986;72987;72988;72989;72990;72991 57842;57843;57844;57845;57846;57847;57848;57849;57850;57851;57852;57853;57854 57845 13 DPVPGYSVPAAEHSTITAWGK Unmodified 2182.0695 0.069483134 1481 P43490 NAMPT Nicotinamide phosphoribosyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 77.47 76.336 3 2.5974E-10 91059 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 71.735 69.581 898660000 34525000 698120000 18868000 2741700 3338800 9959700 5683500 6983000 7613800 11930000 13557000 17829000 6929400 13207000 47374000 8727 1481 7946 72992;72993;72994;72995;72996;72997;72998;72999;73000;73001;73002;73003;73004;73005;73006;73007 57855;57856;57857;57858;57859;57860;57861;57862 57858 8 DPVPSGFSAGEVLIPLADEYDPMFPNDYEK Unmodified 3311.522 0.52202696 3874 Q96I25 RBM17 Splicing factor 45 yes yes 0 0 0 By MS/MS 2 0 1 1 100.45 95.733 3 2.0313E-11 118309 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 56.156 53.719 26582000 0 26582000 0 0 0 0 0 0 0 0 0 0 0 0 0 8728 3874 7947 73008 57863 57863 1 DPVQCSRDVVICPDASLEDAK Unmodified 2373.0941 0.094059679 4015 Q99497 PARK7 Protein deglycase DJ-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.43 0.495 4 3 2 4 1 73.396 68.543 2;3 3.8004E-186 86657 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 284.38 265.21 3289400000 322990000 2904200000 62218000 0 0 0 0 0 0 0 0 0 0 0 0 8729 4015 7948 73009;73010;73011;73012;73013;73014;73015 57864;57865;57866;57867;57868;57869;57870;57871;57872;57873;57874 57865 10 DPVQCSRDVVICPDASLEDAKK Unmodified 2501.189 0.1890227 4015 Q99497 PARK7 Protein deglycase DJ-1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 2 2 2 67.967 62.187 3;4 1.5667E-21 80147 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.337 88.76 250860000 76703000 133510000 40647000 0 0 0 0 0 0 0 0 0 0 0 0 8730 4015 7949 73016;73017;73018;73019;73020;73021 57875;57876;57877;57878;57879;57880;57881 57875 6 DPVQEAWAEDVDLR Unmodified 1641.7635 0.76346471 1000 P14618 PKM Pyruvate kinase PKM yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 2 1 2 2 80.812 80.871 2;3 7.8476E-27 93576 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 156.14 147.41 385610000 0 0 0 6689800 16696000 31781000 13049000 29419000 19776000 32180000 44848000 51653000 4643500 23104000 111770000 8731 1000 7950 73022;73023;73024;73025;73026;73027;73028;73029;73030;73031;73032;73033;73034;73035;73036;73037;73038;73039;73040;73041;73042;73043;73044 57882;57883;57884;57885;57886;57887;57888;57889;57890;57891;57892;57893;57894;57895;57896;57897 57888 16 DPVQEAWAEDVDLRVNFAMNVGK Unmodified 2602.2486 0.24858649 1000 P14618 PKM Pyruvate kinase PKM yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.27 0.445 8 3 8 2 1 99.53 93.441 3 3.7895E-96 114926 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 147.67 125.77 256750000 219880000 35349000 1522600 0 0 0 0 0 0 0 0 0 0 0 0 8732 1000 7951 73045;73046;73047;73048;73049;73050;73051;73052;73053;73054;73055 57898;57899;57900;57901;57902;57903;57904;57905;57906;57907 57902 9 DPVQEAWAEDVDLRVNFAMNVGK Oxidation (M) 2618.2435 0.24350111 1000 P14618 PKM Pyruvate kinase PKM yes yes 0 1 1 By MS/MS 2.67 0.471 1 2 3 93.188 87.36 3 4.9415E-81 111123 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 141.78 135.56 143630000 143630000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8733 1000 7951 73056;73057;73058 57908;57909;57910;57911 57910 1355 4 DPVSAAVPAPGR Unmodified 1135.5986 0.59857163 2861 Q68EM7 ARHGAP17 Rho GTPase-activating protein 17 yes yes 0 0 0 By MS/MS 10 0 1 1 46.563 46.044 2 0.010588 52134 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 46.334 31.572 3782900 0 0 0 0 3782900 0 0 0 0 0 0 0 0 0 0 8734 2861 7952 73059 57912 57912 1 DPVSIEER Unmodified 943.46108 0.4610751 1776 P55884 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.6 30.789 2 0.0057717 33200 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 119.41 95.883 326850000 0 0 0 16179000 3010100 29116000 15605000 14261000 15970000 32606000 38953000 35063000 30209000 32960000 62918000 8735 1776 7953 73060;73061;73062;73063;73064;73065;73066;73067;73068;73069;73070;73071 57913;57914;57915;57916;57917;57918;57919;57920;57921;57922;57923 57922 10 DPVSRTPALVFEHVNNTDFK Unmodified 2285.144 0.14404506 1964 P68400;Q8NEV1 CSNK2A1;CSNK2A3 Casein kinase II subunit alpha;Casein kinase II subunit alpha 3 yes no 0 0 1 By MS/MS 2 0 2 2 83.709 75.578 3;4 1.657E-23 98745 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.77 91.216 57152000 57152000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8736 1964 7954 73072;73073 57924;57925 57924 1 DPYANLMLQR Oxidation (M) 1235.5969 0.59685707 3133 Q86TB9 PATL1 Protein PAT1 homolog 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 2 2 2 2 2 2 2 2 2 2 1 58.223 58.391 2 0.0010804 66113 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 94.114 71.878 331110000 0 0 0 0 32847000 28056000 28313000 26263000 27025000 30963000 35258000 46686000 37213000 27733000 10755000 8737 3133 7955 73074;73075;73076;73077;73078;73079;73080;73081;73082;73083;73084;73085;73086;73087;73088;73089;73090;73091;73092;73093;73094;73095 57926;57927;57928;57929;57930;57931;57932;57933;57934;57935;57936;57937;57938;57939;57940;57941;57942;57943;57944;57945 57926 4750 16 DPYANLMLQR Unmodified 1219.6019 0.60194245 3133 Q86TB9 PATL1 Protein PAT1 homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 70.551 70.565 2 0.00047484 81029 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 160.11 137.87 205570000 0 0 0 12928000 15281000 17990000 17590000 23613000 17296000 22801000 0 33601000 20117000 24356000 0 8738 3133 7955 73096;73097;73098;73099;73100;73101;73102;73103;73104;73105 57946;57947;57948;57949;57950;57951;57952;57953;57954;57955 57949 9 DPYANLMLQREK Unmodified 1476.7395 0.73949856 3133 Q86TB9 PATL1 Protein PAT1 homolog 1 yes yes 0 0 1 By MS/MS 2 0 1 1 63.707 59.948 3 0.039959 74480 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 38.238 25.611 2964000 0 0 2964000 0 0 0 0 0 0 0 0 0 0 0 0 8739 3133 7956 73106 57956;57957 57957 2 DPYEACDGAHAVVICTEWDMFK Unmodified 2613.0974 0.097430498 425 O60701 UGDH UDP-glucose 6-dehydrogenase yes yes 0 0 0 By MS/MS 2 0 1 1 93.319 85.189 3 6.7151E-40 110327 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 120.23 118.99 20100000 20100000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8740 425 7957 73107 57958;57959 57959 2 DPYTATMIGFSK Unmodified 1329.6275 0.6274885 3485 Q8TC07 TBC1D15 TBC1 domain family member 15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 76.605 75.786 2 7.1261E-05 87815 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 108.47 103.31 397560000 0 319030000 3206000 5065900 4103400 8758300 5846500 9168200 5001500 10857000 11483000 0 6979900 8055300 0 8741 3485 7958 73108;73109;73110;73111;73112;73113;73114;73115;73116;73117;73118;73119;73120;73121;73122 57960;57961;57962;57963;57964;57965;57966;57967;57968;57969;57970;57971;57972;57973;57974;57975;57976 57961 16 DPYTATMIGFSK Oxidation (M) 1345.6224 0.62240312 3485 Q8TC07 TBC1D15 TBC1 domain family member 15 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 2 1 1 1 61.634 61.799 2 0.0013036 70263 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 64.374 49.7 21395000 0 0 0 0 0 3488600 4536400 0 0 4354500 5619000 0 0 3396500 0 8742 3485 7958 73123;73124;73125;73126;73127;73128;73129 57977;57978;57979;57980;57981 57978 5006 5 DPYTGQQISLFQAMQK Oxidation (M) 1869.8931 0.89309867 2501 Q15149 PLEC Plectin yes yes 0 1 0 By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.364 76.422 2 6.0199E-11 88323 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 96.604 79.831 81373000 0 0 0 8085200 4738800 6967100 5693100 5693600 4657400 6435800 4630400 8718000 5345900 5112900 15295000 8743 2501 7959 73130;73131;73132;73133;73134;73135;73136;73137;73138;73139;73140;73141 57982 57982 4103 1 DQAAEGINLIK Unmodified 1170.6245 0.62445203 1997 P82650 MRPS22 28S ribosomal protein S22, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 62.119 62.179 2 0.0058116 70206 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.607 45.477 34077000 0 0 0 1976100 3315600 2311900 0 1756700 0 4029400 0 5525300 4168800 3958300 7034700 8744 1997 7960 73142;73143;73144;73145;73146;73147;73148;73149;73150;73151 57983;57984;57985;57986;57987;57988;57989;57990;57991 57985 9 DQAEEEPNRIPSR Unmodified 1539.7277 0.7277479 2427 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 25.989 26.056 3 0.00035085 27776 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 63.76 63.76 71015000 0 0 0 0 3452100 12082000 10520000 11656000 8330200 12904000 0 0 12071000 0 0 8745 2427 7961 73152;73153;73154;73155;73156;73157;73158 57992;57993;57994;57995;57996;57997 57994 5 DQAENEDGAQENTFSMDPQLER Oxidation (M) 2539.0405 0.040503784 1630 P50570 DNM2 Dynamin-2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 54.335 54.525 3 6.9144E-27 61382 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.881 92.853 133430000 0 0 0 10706000 0 18296000 17439000 0 0 21743000 15184000 23638000 0 0 26422000 8746 1630 7962 73159;73160;73161;73162;73163;73164;73165 57998;57999;58000;58001;58002;58003;58004;58005;58006 58002 2617 9 DQAENEDGAQENTFSMDPQLER Unmodified 2523.0456 0.045589162 1630 P50570 DNM2 Dynamin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 1 2 2 2 1 2 2 2 2 2 2 68.88 69.016 2;3 1.2444E-25 78658 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 115.5 112.87 186910000 0 0 0 7566000 7781400 15118000 10690000 9971200 6933500 19293000 18195000 15002000 12899000 15158000 48304000 8747 1630 7962 73166;73167;73168;73169;73170;73171;73172;73173;73174;73175;73176;73177;73178;73179;73180;73181;73182;73183;73184;73185;73186 58007;58008;58009;58010;58011;58012;58013;58014;58015;58016;58017;58018;58019;58020;58021;58022;58023;58024 58011 18 DQAHLQPLPTQVVSR Unmodified 1687.9006 0.90056731 4032 Q99607 ELF4 ETS-related transcription factor Elf-4 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 62.41 62.472 3 0.00062819 71793 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 44.734 33.88 59105000 0 0 0 3399500 2806800 6077000 4904200 4901200 4157400 4993700 6665700 0 6140600 6331200 8728300 8748 4032 7963 73187;73188;73189;73190;73191;73192;73193;73194;73195;73196;73197 58025;58026;58027;58028;58029;58030;58031;58032;58033 58032 9 DQAIVSAVANR Unmodified 1142.6044 0.60438529 4161 Q9BUI4 POLR3C DNA-directed RNA polymerase III subunit RPC3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 46.409 46.567 2 0.00038093 52602 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 87.258 59.733 59461000 0 0 0 3466400 3170300 6142100 4393100 0 4515700 9306300 7045100 6096600 5640900 0 9684900 8749 4161 7964 73198;73199;73200;73201;73202;73203;73204;73205;73206;73207;73208 58034;58035;58036;58037;58038;58039;58040;58041;58042;58043;58044 58034 11 DQAVAVQHSVEEITDNYPQAIVYPFIISSESYSFK Unmodified 3973.9262 0.92617953 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS 2 0 1 1 100.07 91.936 3 3.4653E-19 118574 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.776 60.212 24139000 24139000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8750 1986 7965 73209 58045 58045 1 DQAVENILVSPVVVASSLGLVSLGGK Unmodified 2550.4269 0.42686843 1624 P50454 SERPINH1 Serpin H1 yes yes 0 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 3 1 103.44 99.584 2;3 8.0515E-22 122735 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.63 124.63 86693000 0 85668000 1025700 0 0 0 0 0 0 0 0 0 0 0 0 8751 1624 7966 73210;73211;73212;73213 58046;58047;58048;58049;58050;58051 58048 6 DQAVFPQNGLVVSSVDVQSVEPVDQR Unmodified 2811.4039 0.40390115 2444 Q14764 MVP Major vault protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 87.032 87.182 3 0.0001161 101073 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 31.771 28.641 9561800 0 0 0 0 0 0 0 0 0 2787800 2169300 1785000 0 0 2819700 8752 2444 7967 73214;73215;73216;73217 58052;58053;58054 58052 3 DQAVMISGESGAGK Unmodified 1348.6293 0.62927941 121 O00159 MYO1C Unconventional myosin-Ic yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 8 1 1 1 1 1 1 1 1 35.737 35.751 2 1.7468E-05 39809 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 88.338 55.445 24490000 0 0 0 4075100 2877000 3429400 3668500 4278300 0 0 3299900 0 0 2861900 0 8753 121 7968 73218;73219;73220;73221;73222;73223;73224;73225 58055;58056;58057;58058;58059 58059 5 DQAVMISGESGAGK Oxidation (M) 1364.6242 0.62419403 121 O00159 MYO1C Unconventional myosin-Ic yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 27.587 27.918 2 0.0026353 30018 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 67.749 48.646 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8754 121 7968 73226;73227 58060;58061 58061 160 2 DQCILITGESGAGK Unmodified 1447.6977 0.69769333 367 O43795 MYO1B Unconventional myosin-Ib yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 53.547 53.21 2 2.6119E-05 60803 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 86.772 71.19 18342000 0 0 0 6480500 5902400 0 0 5958800 0 0 0 0 0 0 0 8755 367 7969 73228;73229;73230;73231 58062;58063;58064;58065;58066 58066 5 DQDAIETDAMIK Oxidation (M) 1364.613 0.61296065 1349 P35251 RFC1 Replication factor C subunit 1 yes yes 0 1 0 By MS/MS 10 0 1 1 44.633 44.127 2 0.023431 49922 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 51.092 33.272 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8756 1349 7970 73232 58067 58067 1 DQDDQKPGPSER Unmodified 1370.6062 0.60623578 2532 Q15424 SAFB Scaffold attachment factor B1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.7972 6.9208 3 0.0027558 4365 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.122 50.969 97572000 0 0 0 7393400 5672100 2649700 6457600 6681400 4546200 7549800 16059000 9787000 8187000 9454100 13134000 8757 2532 7971 73233;73234;73235;73236;73237;73238;73239;73240;73241;73242;73243;73244 58068;58069;58070;58071 58068 4 DQDEEDRELIMK Oxidation (M) 1535.6774 0.67735182 410 O60524 NEMF Nuclear export mediator factor NEMF yes yes 0 1 1 By MS/MS By MS/MS By matching 2 0 3 1 1 1 35.193 30.362 3 0.023567 40134 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 59.198 43.654 21983000 8076300 11592000 2314600 0 0 0 0 0 0 0 0 0 0 0 0 8758 410 7972 73245;73246;73247 58072 58072 0 DQDELKPGPTNR Unmodified 1368.6634 0.66335673 2377 Q14151 SAFB2 Scaffold attachment factor B2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 19.516 19.708 3 0.0034477 19777 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.314 41.724 125530000 0 0 0 10497000 8906700 10598000 9213200 0 6618600 14991000 14150000 20559000 0 10387000 19614000 8759 2377 7973 73248;73249;73250;73251;73252;73253;73254;73255;73256;73257 58073;58074;58075;58076;58077 58075 5 DQDEMNLER Oxidation (M) 1164.4717 0.47171614 10 A1X283 SH3PXD2B SH3 and PX domain-containing protein 2B yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 14.7 14.888 2 0.0041664 14595 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 75.378 69.074 47505000 0 0 0 4045700 4401700 0 4427600 0 3924100 5134100 5875200 4988900 4193700 4539700 5974200 8760 10 7974 73258;73259;73260;73261;73262;73263;73264;73265;73266;73267 58078;58079;58080;58081;58082;58083;58084;58085;58086;58087;58088 58084 12 11 DQDLEPGAPSMGAK Unmodified 1414.6398 0.6398441 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 43.908 44.097 2 8.6137E-12 48312 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 128.33 114.21 354400000 0 0 0 24153000 21578000 35631000 0 22721000 0 32052000 54520000 37233000 25072000 39784000 61654000 8761 848 7975 73268;73269;73270;73271;73272;73273;73274;73275;73276;73277 58089;58090;58091;58092;58093;58094;58095;58096;58097 58095 7 DQDLEPGAPSMGAK Oxidation (M) 1430.6348 0.63475872 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 29.748 29.945 2 2.2403E-12 32428 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 104.07 71.319 277330000 0 0 0 12035000 10193000 18267000 14222000 12739000 0 24215000 34642000 43588000 38528000 31811000 37088000 8762 848 7975 73278;73279;73280;73281;73282;73283;73284;73285;73286;73287;73288 58098 58098 1052 1 DQDLITIIGK Unmodified 1114.6234 0.6233894 2033 Q00341 HDLBP Vigilin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 80.452 79.331 2 0.001444 92263 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 91.087 66.193 705510000 4286700 290170000 5492700 20843000 19206000 47043000 19610000 21156000 23617000 37892000 40250000 39424000 31921000 39086000 65515000 8763 2033 7976 73289;73290;73291;73292;73293;73294;73295;73296;73297;73298;73299;73300;73301;73302;73303;73304 58099;58100;58101;58102;58103;58104;58105;58106;58107;58108;58109;58110;58111;58112;58113 58110 15 DQDLSILSTSYQFAK Unmodified 1714.8414 0.84138068 3086 Q7Z3T8 ZFYVE16 Zinc finger FYVE domain-containing protein 16 yes yes 0 0 0 By MS/MS 2 0 1 1 88.233 83.391 2 3.3009E-05 103611 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.87 74.166 50038000 0 50038000 0 0 0 0 0 0 0 0 0 0 0 0 0 8764 3086 7977 73305 58114 58114 1 DQDLTQEIAMEHFVK Unmodified 1802.8509 0.85089951 5011 Q9ULX6 AKAP8L A-kinase anchor protein 8-like yes yes 0 0 0 By MS/MS 10 0 1 1 79.102 79.348 3 0.00082195 91333 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.297 36.727 7761800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7761800 8765 5011 7978 73306 58115 58115 1 DQDMSSPTTMK Unmodified 1239.5111 0.51113811 174 O00712 NFIB Nuclear factor 1 B-type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 25.992 26.307 2 0.00055755 27820 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 81.338 69.49 29598000 0 0 0 0 0 2155300 1743600 0 1550300 4010900 3132500 3825400 3053200 3420500 6706200 8766 174 7979 73307;73308;73309;73310;73311;73312;73313;73314;73315 58116;58117;58118;58119;58120;58121;58122;58123;58124 58121 9 DQDMSSPTTMK 2 Oxidation (M) 1271.501 0.50096736 174 O00712 NFIB Nuclear factor 1 B-type yes yes 0 2 0 By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 6.7489 6.8445 2 0.00023432 3817 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 77.677 66.187 16353000 0 0 0 1121700 998130 788800 1267000 1073500 1172600 2514900 3352900 1593600 0 2469500 0 8767 174 7979 73316;73317;73318;73319;73320;73321;73322;73323;73324;73325 58125;58126;58127 58127 245;246 3 DQDMSSPTTMK Oxidation (M) 1255.5061 0.50605273 174 O00712 NFIB Nuclear factor 1 B-type yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 14.355 14.534 2 0.0028412 13858 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 61.78 17.43 26877000 0 0 0 1991000 1372600 0 1786000 0 1956400 3229500 4264800 4361300 0 3763000 4152500 8768 174 7979 73326;73327;73328;73329;73330;73331;73332;73333;73334 58128;58129;58130;58131;58132 58128 245;246 5 DQDNMQAELNR Oxidation (M) 1348.5677 0.56774179 1328 P33176 KIF5B Kinesin-1 heavy chain yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 2 1 1 2 1 1 1 1 1 1 16.408 16.558 2 0.00019603 15253 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.108 79.279 48870000 0 0 0 3092100 4909900 3121400 4064200 0 5833800 3788000 3875600 6302200 6309000 3211100 4362000 8769 1328 7980 73335;73336;73337;73338;73339;73340;73341;73342;73343;73344;73345;73346;73347 58133;58134;58135;58136;58137;58138;58139;58140;58141 58136 1975 9 DQDNMQAELNR Unmodified 1332.5728 0.57282717 1328 P33176 KIF5B Kinesin-1 heavy chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.214 34.397 2 3.9004E-06 37782 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 142.55 126.89 215650000 0 0 0 15272000 11884000 17368000 14200000 11891000 9608600 17173000 27144000 24411000 16866000 16318000 33513000 8770 1328 7980 73348;73349;73350;73351;73352;73353;73354;73355;73356;73357;73358;73359 58142;58143;58144;58145;58146;58147;58148;58149;58150 58142 9 DQDNMQAELNRLQAENDASK Oxidation (M) 2305.0241 0.024065859 1328 P33176 KIF5B Kinesin-1 heavy chain yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 46.412 46.728 3 4.63E-28 52607 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 98.175 91.739 63531000 0 0 0 0 0 8398800 7678000 4184000 5996300 6849800 10185000 9732100 0 0 10506000 8771 1328 7981 73360;73361;73362;73363;73364;73365;73366;73367 58151;58152;58153;58154;58155;58156;58157;58158;58159;58160;58161 58153 1975 10 DQDNMQAELNRLQAENDASK Unmodified 2289.0292 0.029151237 1328 P33176 KIF5B Kinesin-1 heavy chain yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 67.292 67.359 3 1.3486E-61 76729 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 138.75 130.76 58289000 0 0 0 2125600 1989400 6243400 3199000 5233800 0 4711900 5805500 9809200 0 5040200 14131000 8772 1328 7981 73368;73369;73370;73371;73372;73373;73374;73375;73376;73377 58162;58163;58164;58165;58166;58167 58164 6 DQDQDEDEEEK Unmodified 1378.5008 0.50082724 1351 P35269 GTF2F1 General transcription factor IIF subunit 1 yes yes 0 0 0 By MS/MS By MS/MS 1 0 2 1 1 106.02 111.29 2 1.0559E-16 99140 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 170.5 170.5 9427400 9427400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8773 1351 7982 73378;73379 58168;58169 58169 2 DQDSRSAPEPK Unmodified 1228.5684 0.56839372 1166 P23588 EIF4B Eukaryotic translation initiation factor 4B yes yes 0 0 1 By matching By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 8.0329 4.9149 2 0.030225 6787 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 77.379 66.669 628010000 49068000 573170000 5769900 0 0 0 0 0 0 0 0 0 0 0 0 8774 1166 7983 73380;73381;73382;73383 58170;58171 58171 2 DQDSVLLEK Unmodified 1045.5292 0.52915466 1233 P28324 ELK4 ETS domain-containing protein Elk-4 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 7 1 2 1 1 1 1 41.464 41.799 2 0.0088711 47263 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 68.371 24.601 16915000 0 0 0 0 0 0 4203800 0 2428200 0 2243500 0 0 1983300 6056100 8775 1233 7984 73384;73385;73386;73387;73388;73389;73390 58172;58173;58174;58175 58172 4 DQEALEAVK Unmodified 1001.5029 0.50293991 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.88 3.69 2 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 41.841 41.679 2 0.0031256 34560 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 91.069 36.864 566050000 73858000 123340000 0 17760000 21270000 35560000 28875000 23520000 18005000 39868000 37360000 45517000 30168000 26975000 43972000 8776 643 7985 73391;73392;73393;73394;73395;73396;73397;73398;73399;73400;73401;73402;73403;73404;73405;73406 58176;58177;58178;58179;58180;58181;58182;58183;58184;58185;58186;58187;58188;58189;58190;58191;58192;58193;58194 58191 17 DQEALEAVKR Unmodified 1157.6041 0.60405094 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 0 1 By MS/MS 10 0 1 1 8.8346 9.0981 3 0.048507 7637 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 20.03 7.7622 28380000 0 0 0 0 0 0 0 0 0 0 0 28380000 0 0 0 8777 643 7986 73407 58195 58195 1 DQEDDEQQRLNK Unmodified 1516.6754 0.67537798 2510 Q15276 RABEP1 Rab GTPase-binding effector protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 12.414 11.756 3 0.0004092 10556 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.062 70.376 87259000 11288000 42410000 0 2738000 2514600 2011200 3675100 1312300 0 2773600 2089000 2928900 2440000 4066600 7012300 8778 2510 7987 73408;73409;73410;73411;73412;73413;73414;73415;73416;73417;73418;73419;73420;73421 58196;58197;58198 58197 2 DQEFTVDTR Unmodified 1109.4989 0.49891717 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.931 38.111 2 0.0052927 40982 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.113 41.718 779690000 0 0 0 138690000 40591000 47844000 54908000 131220000 34060000 48024000 46194000 66012000 88697000 34366000 49088000 8779 487 7988 73422;73423;73424;73425;73426;73427;73428;73429;73430;73431;73432;73433 58199;58200;58201;58202 58199 3 DQEFTVDTRGAGGQGK Unmodified 1664.7754 0.77542638 487 O75369 FLNB Filamin-B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 37.802 32.924 3 0.0001355 42936 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.296 64.73 137040000 19760000 110600000 6681600 0 0 0 0 0 0 0 0 0 0 0 0 8780 487 7989 73434;73435;73436;73437 58203;58204;58205 58203 3 DQEFTVK Unmodified 865.41815 0.41814765 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.643 28.838 2 0.023389 31180 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 87.754 6.3731 754470000 0 0 0 38956000 30550000 56489000 43965000 36665000 27632000 68148000 97659000 90079000 54124000 63830000 146380000 8781 1124 7990 73438;73439;73440;73441;73442;73443;73444;73445;73446;73447;73448;73449 58206;58207;58208;58209;58210 58208 4 DQEPIPQNIDR Unmodified 1323.6419 0.64189301 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 45.679 45.809 2 0.0083086 51979 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 51.445 23.271 27978000 0 0 0 3712600 4136500 0 0 0 0 0 0 8664100 0 3295200 8169400 8782 5049 7991 73450;73451;73452;73453;73454 58211;58212;58213;58214 58213 4 DQEVNFQEYVTFLGALALIYNEALK Unmodified 2887.4644 0.46437615 825 P06703 S100A6 Protein S100-A6 yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 106.48 103.45 2;3 8.1206E-05 125465 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 35.628 28.979 3476900 0 1355600 2121300 0 0 0 0 0 0 0 0 0 0 0 0 8783 825 7992 73455;73456 58215;58216 58216 2 DQFGFINYEVGDSK Unmodified 1617.7311 0.73110195 517 O75534 CSDE1 Cold shock domain-containing protein E1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 82.386 81.158 2 1.8787E-52 99463 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 190.68 176.12 627360000 37083000 494330000 7635500 0 0 6642200 2792900 5078700 3776200 6135500 11474000 11941000 2943500 6707700 30811000 8784 517 7993 73457;73458;73459;73460;73461;73462;73463;73464;73465;73466;73467;73468;73469;73470 58217;58218;58219;58220;58221;58222;58223;58224;58225;58226;58227;58228;58229 58220 13 DQFGNSIINTPLK Unmodified 1445.7514 0.75144346 4301 Q9GZR1 SENP6 Sentrin-specific protease 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 77.04 76.757 2 1.1019E-06 88910 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 92.866 36.661 145620000 0 67793000 0 4128600 4510800 5676400 6451600 4282500 5896900 7892200 6611500 8368500 5591400 8091100 10328000 8785 4301 7994 73471;73472;73473;73474;73475;73476;73477;73478;73479;73480;73481;73482;73483;73484 58230;58231;58232;58233;58234;58235;58236;58237;58238 58231 9 DQFNSHIQLVR Unmodified 1355.6946 0.69459728 3414 Q8ND24 RNF214 RING finger protein 214 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 57.41 57.53 3 0.00092345 64927 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 72.652 57.776 138170000 0 0 0 10940000 7858500 0 0 0 0 15555000 20871000 19081000 22657000 14379000 26823000 8786 3414 7995 73485;73486;73487;73488;73489;73490;73491;73492 58239 58239 1 DQFPEVYVPTVFENYIADIEVDGK Unmodified 2786.3327 0.33269327 858 P08134 RHOC Rho-related GTP-binding protein RhoC yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 3 2 1 101.77 96.492 2;3 7.2789E-14 120490 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.89 98.927 226780000 134740000 86997000 5043700 0 0 0 0 0 0 0 0 0 0 0 0 8787 858 7996 73493;73494;73495;73496;73497;73498 58240;58241;58242;58243;58244;58245;58246 58241 6 DQFPEVYVPTVFENYVADIEVDGK Unmodified 2772.317 0.31704321 1851 P61586 RHOA Transforming protein RhoA yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.5 0.5 3 3 1 4 1 100.72 97.025 2;3 2.6318E-19 118192 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 96.793 94.144 350620000 12994000 307660000 29968000 0 0 0 0 0 0 0 0 0 0 0 0 8788 1851 7997 73499;73500;73501;73502;73503;73504 58247;58248;58249;58250;58251;58252;58253;58254;58255 58255 9 DQGADSSQIHVPVEPQEDNNLPTHGGQEQALGSELQSQLPK Unmodified 4377.0745 0.07452811 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 82.522 80.061 4 0.040677 97041 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 13.316 12.178 4576900 0 0 4576900 0 0 0 0 0 0 0 0 0 0 0 0 8789 645 7998 73505 58256 58256 1 DQGAYLILR Unmodified 1047.5713 0.57129425 4154 Q9BTY7 HGH1 Protein HGH1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 71.205 71.212 2 0.019448 82083 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 53.968 38.086 39760000 0 0 0 6777800 0 8458700 6131900 6308300 5550600 0 0 0 0 6532500 0 8790 4154 7999 73506;73507;73508;73509;73510;73511 58257;58258;58259 58259 3 DQGELER Unmodified 845.38791 0.38791015 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 9.5647 9.6782 2 0.024164 8123 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 95.541 37.296 282910000 0 0 0 26559000 29014000 47798000 46258000 28620000 30407000 12272000 0 19910000 15962000 8820900 17294000 8791 1356 8000 73512;73513;73514;73515;73516;73517;73518;73519;73520;73521;73522 58260;58261;58262;58263 58263 2 DQGELERQLLQANPILEAFGNAK Unmodified 2553.3187 0.31871496 1356 P35579 MYH9 Myosin-9 yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 99.201 93.46 3 2.3638E-18 117966 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.708 89.61 32106000 22450000 9656100 0 0 0 0 0 0 0 0 0 0 0 0 0 8792 1356 8001 73523;73524 58264;58265 58265 2 DQGGFGDRNEYGSR Unmodified 1556.6604 0.66039662 3690 Q92945 KHSRP Far upstream element-binding protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.407 24.615 3 0.00037757 26277 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 46.823 41.744 543860000 0 0 0 34188000 32628000 29097000 37433000 0 29098000 39463000 42430000 66430000 41832000 47799000 143460000 8793 3690 8002 73525;73526;73527;73528;73529;73530;73531;73532;73533;73534;73535;73536 58266;58267;58268;58269;58270;58271;58272;58273;58274;58275;58276;58277 58266 9 DQGINIR Unmodified 814.42972 0.42971539 2428 Q14677 CLINT1 Clathrin interactor 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 28.438 28.61 2 0.025135 30359 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 81.381 40.461 356850000 0 0 0 26226000 25621000 28090000 32899000 26794000 24664000 0 0 56116000 49877000 31184000 55383000 8794 2428 8003 73537;73538;73539;73540;73541;73542;73543;73544;73545;73546 58278 58278 1 DQGKPEVGEYAK Unmodified 1319.6357 0.635745 189 O14578 CIT Citron Rho-interacting kinase yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 26.815 22.577 3 0.042195 28334 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 37.613 29.885 24877000 0 24877000 0 0 0 0 0 0 0 0 0 0 0 0 0 8795 189 8004 73547;73548 58279 58279 1 DQGLSIMVSGK Oxidation (M) 1149.57 0.56997362 2033 Q00341 HDLBP Vigilin yes yes 0 1 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 52.85 47.244 2 0.0074783 60823 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.525 58.538 45082000 527440 44554000 0 0 0 0 0 0 0 0 0 0 0 0 0 8796 2033 8005 73549;73550 58280 58280 3286 1 DQGLSIMVSGK Unmodified 1133.5751 0.575059 2033 Q00341 HDLBP Vigilin yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 66.403 60.09 2 0.0071761 74307 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 70.808 48.571 201340000 5502400 195840000 0 0 0 0 0 0 0 0 0 0 0 0 0 8797 2033 8005 73551;73552;73553 58281;58282;58283;58284;58285 58284 5 DQGTCPASVSDPSHPLLSNR Unmodified 2136.9858 0.98582986 3575 Q8WWL2 SPIRE2 Protein spire homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 51.503 51.467 3 3.2467E-05 58167 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 54.672 49.579 40011000 0 0 0 0 9872400 0 9558000 9573800 0 11007000 0 0 0 0 0 8798 3575 8006 73554;73555;73556;73557 58286;58287;58288 58286 3 DQGTYEDYVEGLR Unmodified 1543.6791 0.67906638 1813 P60660 MYL6 Myosin light polypeptide 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 2 1 1 1 1 2 1 1 1 1 1 1 72.832 72.857 2 2.5753E-106 83601 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 206.49 174.17 1563600000 0 0 0 89013000 133090000 126710000 89543000 93488000 80347000 134050000 145570000 224540000 107910000 96125000 243200000 8799 1813 8007 73558;73559;73560;73561;73562;73563;73564;73565;73566;73567;73568;73569;73570;73571 58289;58290;58291;58292;58293;58294;58295;58296;58297;58298;58299;58300;58301;58302;58303;58304;58305;58306;58307;58308 58293 20 DQGTYEDYVEGLRVFDK Unmodified 2032.9378 0.93780026 1813 P60660 MYL6 Myosin light polypeptide 6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 6.46 3.84 4 2 7 3 2 1 1 1 1 1 1 1 1 86.201 84.577 3 7.0546E-22 85850 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 105.38 98.245 2303700000 1432300000 790790000 23770000 0 0 0 0 4518500 4819300 5747300 5323400 5544500 0 2980600 27915000 8800 1813 8008 73572;73573;73574;73575;73576;73577;73578;73579;73580;73581;73582;73583;73584 58309;58310;58311;58312;58313;58314 58310 4 DQGVNVREK Unmodified 1043.536 0.53597137 5284 Q9Y6I3;Q9H201 EPN1;EPN3 Epsin-1;Epsin-3 yes no 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 11.274 7.703 2 0.044804 10831 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.178 37.808 21721000 6127900 15593000 0 0 0 0 0 0 0 0 0 0 0 0 0 8801 5284 8009 73585;73586 58315 58315 1 DQHAGARQAGSVGGLQWCGEPK Unmodified 2308.0767 0.076710552 4143 Q9BTE3 MCMBP Mini-chromosome maintenance complex-binding protein yes yes 0 0 1 By MS/MS By matching 2 0 3 2 1 59.702 52.924 3;4 9.7224E-11 71568 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.703 53.415 65834000 63782000 0 2052500 0 0 0 0 0 0 0 0 0 0 0 0 8802 4143 8010 73587;73588;73589 58316;58317 58316 2 DQHFRGDNEEQEK Unmodified 1630.6972 0.69717606 1684 P52298 NCBP2 Nuclear cap-binding protein subunit 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.798 7.9253 3 9.5122E-14 6479 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 141.54 123.52 221270000 0 0 0 7055500 6166900 6521100 8386600 8632500 7676900 10879000 52688000 34743000 21932000 25252000 31339000 8803 1684 8011 73590;73591;73592;73593;73594;73595;73596;73597;73598;73599;73600;73601 58318;58319;58320;58321;58322;58323;58324;58325;58326;58327 58326 10 DQHSFELDEK Unmodified 1246.5466 0.54659564 2869 Q6DD88 ATL3 Atlastin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 2 2 1 1 1 1 1 1 2 1 35.082 35.092 2;3 0.012644 38477 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 36.952 32.778 149290000 0 0 0 15160000 12696000 15784000 11641000 11331000 10524000 19861000 22759000 0 25397000 4133500 0 8804 2869 8012 73602;73603;73604;73605;73606;73607;73608;73609;73610;73611;73612;73613;73614 58328;58329;58330;58331;58332 58329 5 DQIAQLEASLAAAK Unmodified 1427.762 0.76200815 1111 P20700 LMNB1 Lamin-B1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 85.122 84.216 2 4.119E-14 103235 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 142.89 77.968 276110000 0 239110000 0 0 0 0 0 0 0 6435100 7844600 6738800 2972400 3847000 9162200 8805 1111 8013 73615;73616;73617;73618;73619;73620;73621;73622;73623 58333;58334;58335;58336;58337;58338;58339;58340;58341;58342 58334 10 DQIIDSLK Unmodified 930.50221 0.50221163 2932 Q6P3W7 SCYL2 SCY1-like protein 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 53.148 53.287 2 0.0091721 60282 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 83.753 19.185 275520000 0 0 0 12749000 15313000 22551000 23170000 30961000 21979000 0 28096000 30319000 27674000 32589000 30118000 8806 2932 8014 73624;73625;73626;73627;73628;73629;73630;73631;73632;73633;73634 58343;58344;58345;58346;58347;58348;58349;58350;58351;58352;58353;58354 58353 12 DQIIEMACLITDSDLNILAEGPNLIIK Unmodified 3011.5559 0.55591005 5153 Q9Y3B8 REXO2 Oligoribonuclease, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 2 2 2 2 103.81 98.776 3 3.0834E-29 123298 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.039 83.009 33555000 28999000 4555400 0 0 0 0 0 0 0 0 0 0 0 0 0 8807 5153 8015 73635;73636;73637;73638 58355;58356;58357;58358 58358 4 DQILLEK Unmodified 857.48583 0.48583328 2474 Q15019 SEPT2 Septin-2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 46.294 39.895 2 0.030619 52009 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.47 17.281 196140000 9974000 186160000 0 0 0 0 0 0 0 0 0 0 0 0 0 8808 2474 8016 73639;73640 58359 58359 1 DQINQLELLLK Unmodified 1325.7555 0.7554662 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 6.25 3.77 1 1 2 2 1 1 92.227 90.264 2 0.00027228 111698 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.79 67.914 44995000 0 31775000 0 0 0 0 0 0 0 0 0 0 0 3633300 9586200 8809 2291 8017 73641;73642;73643;73644 58360;58361 58360 2 DQISRVAK Unmodified 915.51378 0.51377937 1902 P62495 ETF1 Eukaryotic peptide chain release factor subunit 1 yes yes 0 0 1 By matching By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 13.911 10.633 2 0.014788 14035 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.31 31.151 670910000 276530000 298910000 95475000 0 0 0 0 0 0 0 0 0 0 0 0 8810 1902 8018 73645;73646;73647;73648 58362;58363;58364 58362 1 DQISVLPNEQDLVREEAQK Unmodified 2210.1179 0.11788989 391 O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS 8.23 3.24 2 1 10 1 2 1 1 1 1 1 1 1 1 1 1 77.031 75.85 3 3.8528E-65 93493 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.56 97.526 347420000 13418000 209170000 0 2204200 0 11276000 6549900 6502600 0 13737000 17662000 14427000 10139000 12343000 29993000 8811 391 8019 73649;73650;73651;73652;73653;73654;73655;73656;73657;73658;73659;73660;73661 58365;58366;58367;58368;58369;58370;58371;58372;58373;58374 58368 8 DQITAGNAAR Unmodified 1015.5047 0.50467125 1135 P22234 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.732 14.902 2 4.3947E-23 14400 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 171.53 110.74 945700000 0 0 0 41208000 24689000 50012000 39627000 29205000 31685000 58064000 121630000 126200000 64100000 109960000 249310000 8812 1135 8020 73662;73663;73664;73665;73666;73667;73668;73669;73670;73671;73672;73673 58375;58376;58377;58378;58379;58380;58381;58382;58383;58384;58385;58386 58385 11 DQITAGNAARK Unmodified 1143.5996 0.59963426 1135 P22234 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.11 6 1 29 2 3 2 3 3 3 2 2 3 2 2 3 2 2 2 10.388 9.8559 2;3 0.00042253 11099 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 94.616 58.282 1998900000 453830000 1241300000 69151000 15194000 9801900 24139000 14020000 8411700 20668000 10417000 34641000 28146000 10647000 25271000 33246000 8813 1135 8021 73674;73675;73676;73677;73678;73679;73680;73681;73682;73683;73684;73685;73686;73687;73688;73689;73690;73691;73692;73693;73694;73695;73696;73697;73698;73699;73700;73701;73702;73703;73704;73705;73706;73707;73708;73709 58387;58388;58389;58390;58391;58392;58393;58394;58395;58396;58397;58398;58399;58400;58401;58402;58403;58404;58405;58406;58407;58408;58409 58395 6 DQIVDLTVGNNK Unmodified 1314.6779 0.67794416 1354 P35527;CON__P35527 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.32 2.23 5 54 2 2 1 5 4 5 4 10 4 6 3 6 2 3 2 65.054 64.845 2;3 1.6412E-22 78708 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 198.72 147.65 + 45571000000 75257000 1152500000 1250000 4595900000 3570600000 2939000000 2151700000 12335000000 2500900000 4672500000 3571300000 4076700000 91304000 2241300000 1595700000 8814 1354 8022 73710;73711;73712;73713;73714;73715;73716;73717;73718;73719;73720;73721;73722;73723;73724;73725;73726;73727;73728;73729;73730;73731;73732;73733;73734;73735;73736;73737;73738;73739;73740;73741;73742;73743;73744;73745;73746;73747;73748;73749;73750;73751;73752;73753;73754;73755;73756;73757;73758;73759;73760;73761;73762;73763;73764;73765;73766;73767;73768 58410;58411;58412;58413;58414;58415;58416;58417;58418;58419;58420;58421;58422;58423;58424;58425;58426;58427;58428;58429;58430;58431;58432;58433;58434;58435;58436;58437;58438;58439;58440;58441;58442;58443;58444;58445;58446;58447;58448;58449;58450;58451;58452;58453;58454;58455;58456;58457;58458;58459;58460;58461;58462;58463;58464;58465;58466;58467;58468;58469 58437 48 DQIYDIFQK Unmodified 1168.5764 0.57643921 1816 P60842 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.65 3.66 1 3 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 80.733 79.982 2 0.0026152 90732 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 138.26 106.12 8833300000 322560000 6088700000 79677000 89571000 66718000 262070000 115120000 127920000 81226000 291840000 227260000 224090000 149040000 208120000 499430000 8815 1816 8023 73769;73770;73771;73772;73773;73774;73775;73776;73777;73778;73779;73780;73781;73782;73783;73784;73785 58470;58471;58472;58473;58474;58475;58476;58477;58478;58479;58480;58481;58482;58483;58484;58485;58486;58487;58488 58484 17 DQIYEIFQK Unmodified 1182.5921 0.59208927 2396 Q14240 EIF4A2 Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.64 2.9 1 1 9 1 1 1 1 1 1 1 1 1 1 1 77.047 76.013 2 0.0035328 88207 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 94.806 43.376 64925000 12515000 7631700 0 1792100 2091400 6876800 2957800 0 0 5425900 6001500 0 3281000 4089200 12262000 8816 2396 8024 73786;73787;73788;73789;73790;73791;73792;73793;73794;73795;73796 58489;58490;58491;58492;58493;58494;58495 58489 7 DQLAADMYNFMAK Unmodified 1516.669 0.66903574 2861 Q68EM7 ARHGAP17 Rho GTPase-activating protein 17 yes yes 0 0 0 By MS/MS 2 0 1 1 90.375 85.479 2 0.0018622 106206 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.06 93.628 64785000 0 64785000 0 0 0 0 0 0 0 0 0 0 0 0 0 8817 2861 8025 73797 58496;58497 58497 2 DQLALAIGK Unmodified 927.53893 0.53893149 1483 P43897 TSFM Elongation factor Ts, mitochondrial yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 61.926 60.955 2 0.011176 69441 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 63.21 31.068 112920000 0 86207000 0 0 0 4351000 2439300 0 0 3823000 3888800 3369000 0 2876100 5967000 8818 1483 8026 73798;73799;73800;73801;73802;73803;73804;73805;73806 58498;58499;58500;58501;58502;58503 58503 6 DQLDETVNVEPLTK Unmodified 1599.7992 0.79918151 2391 Q14203 DCTN1 Dynactin subunit 1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 70.231 69.516 2 2.2194E-20 80379 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 167.44 150.42 107380000 11885000 0 0 4490200 5539300 10394000 9679200 7410500 5889100 11029000 16840000 13909000 10311000 0 0 8819 2391 8027 73807;73808;73809;73810;73811;73812;73813;73814;73815;73816;73817;73818;73819 58504;58505;58506;58507;58508;58509;58510;58511 58504 8 DQLDEVEK Unmodified 974.45566 0.45565537 2581 Q15811;CON__ENSEMBL:ENSBTAP00000001528 ITSN1 Intersectin-1 yes no 0 0 0 By MS/MS 10 0 1 1 15.652 15.517 2 0.033366 15086 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 53.754 2.0186 + 45277000 0 0 0 45277000 0 0 0 0 0 0 0 0 0 0 0 8820 2581 8028 73820 58512 58512 1 DQLEDLK Unmodified 859.42871 0.42871234 455;2296 O75116;Q13464 ROCK2;ROCK1 Rho-associated protein kinase 2;Rho-associated protein kinase 1 no no 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 32.394 32.528 2 0.03372 35915 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 71.715 8.5672 56070000 0 0 0 2638200 2402400 7783600 4262100 0 3982000 0 8757700 0 5439500 6061400 14743000 8821 455;2296 8029 73821;73822;73823;73824;73825;73826;73827;73828;73829 58513 58513 1 DQLIAQSLLEK Unmodified 1256.6976 0.69761697 3012 Q6ZSZ5 ARHGEF18 Rho guanine nucleotide exchange factor 18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 1 1 6 2 1 1 1 1 1 1 78.578 77.697 2 0.00023955 89130 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 105.98 80.416 208890000 0 139350000 0 0 0 0 10347000 8616400 8187600 0 0 0 11097000 12161000 19132000 8822 3012 8030 73830;73831;73832;73833;73834;73835;73836;73837 58514;58515;58516;58517;58518;58519;58520;58521 58520 8 DQLIIDAGQK Unmodified 1099.5873 0.58733824 2713 Q56NI9 ESCO2 N-acetyltransferase ESCO2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 48.553 49.139 2 0.0023779 55126 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 84.213 49.405 97160000 0 0 0 0 0 0 0 0 0 0 23858000 73302000 0 0 0 8823 2713 8031 73838;73839 58522;58523;58524 58522 3 DQLIQEAAAENNK Unmodified 1442.7001 0.70013617 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 42.922 43.152 2 1.3377E-13 48006 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 141.71 120.25 70226000 0 0 0 0 7936200 0 0 0 8092400 12160000 9843700 0 9604400 6289100 16300000 8824 2446 8032 73840;73841;73842;73843;73844;73845;73846;73847;73848;73849 58525;58526;58527;58528;58529;58530;58531;58532;58533 58529 9 DQLIYNLLK Unmodified 1118.6336 0.63356015 719 P00338 LDHA L-lactate dehydrogenase A chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.08 3.94 1 8 3 12 4 6 2 1 1 1 1 1 1 1 1 1 1 1 1 88.09 86.879 2 0.00039885 102493 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 125.81 102.77 9539000000 717060000 7617900000 161920000 6271200 7874600 11101000 9463400 13152000 11061000 18783000 124560000 76681000 12051000 96045000 655090000 8825 719 8033 73850;73851;73852;73853;73854;73855;73856;73857;73858;73859;73860;73861;73862;73863;73864;73865;73866;73867;73868;73869;73870;73871;73872;73873 58534;58535;58536;58537;58538;58539;58540;58541;58542;58543;58544;58545;58546;58547;58548;58549;58550;58551;58552;58553;58554;58555;58556;58557;58558;58559;58560;58561;58562;58563;58564;58565;58566;58567;58568;58569 58551 35 DQLLLGPTYATPK Unmodified 1415.766 0.76603089 1757 P55084 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.64 2.9 1 1 9 2 1 1 1 1 1 1 1 1 1 75.089 74.365 2 0.0018258 91651 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.24 78.008 154090000 0 104480000 0 9087200 3958700 4539300 4737100 0 3178000 5397400 0 6670300 0 4706800 7338100 8826 1757 8034 73874;73875;73876;73877;73878;73879;73880;73881;73882;73883;73884 58570;58571;58572;58573 58570 4 DQLPADECNK Unmodified 1188.5081 0.50810164 1399 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.22 3.94 1 2 6 2 1 1 1 1 1 1 1 28.356 28.167 2 8.9536E-06 92367 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 130.75 91.956 182740000 60663000 15367000 0 8520200 7860500 0 0 0 0 0 0 22605000 14475000 16072000 37174000 8827 1399 8035 73885;73886;73887;73888;73889;73890;73891;73892;73893 58574;58575;58576;58577;58578;58579;58580 58576 6 DQLQEQLQALK Unmodified 1312.6987 0.69867961 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 70.521 70.194 2 5.3924E-05 80303 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 114.89 57.036 236690000 0 111530000 0 7328500 6572400 12632000 10199000 9133800 6902600 11092000 10064000 17750000 10470000 9515700 13503000 8828 2459 8036 73894;73895;73896;73897;73898;73899;73900;73901;73902;73903;73904;73905;73906 58581;58582;58583;58584;58585;58586;58587;58588;58589;58590;58591;58592;58593 58586 8 DQLQTFSEEHPVLLTEAPLNPR Unmodified 2533.2813 0.28126682 1837 P61163 ACTR1A Alpha-centractin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 85.057 85.198 3 9.3195E-43 98697 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 105.32 76.198 97499000 0 0 0 0 0 6874900 0 5918800 6192500 13227000 10377000 5712300 0 4280600 44916000 8829 1837 8037 73907;73908;73909;73910;73911;73912;73913;73914 58594;58595;58596;58597;58598;58599;58600;58601;58602;58603;58604 58596 11 DQLQTFSEEHPVLLTEAPLNPRK Unmodified 2661.3762 0.37622984 1837 P61163 ACTR1A Alpha-centractin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 85.081 80.839 4 8.4333E-14 102998 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.35 82.808 113700000 39363000 55397000 0 0 0 0 0 0 0 0 0 0 0 0 18935000 8830 1837 8038 73915;73916;73917 58605;58606;58607 58607 3 DQLQTFSEEHPVLLTEAPLNPSK Unmodified 2592.3071 0.30714722 1444 P42025 ACTR1B Beta-centractin yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 87.598 84.383 3 3.472E-11 100995 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 67.11 59.663 16518000 0 16518000 0 0 0 0 0 0 0 0 0 0 0 0 0 8831 1444 8039 73918;73919 58608;58609;58610 58609 3 DQLSEQTQK Unmodified 1075.5146 0.51456723 4264 Q9BZF9 UACA Uveal autoantigen with coiled-coil domains and ankyrin repeats yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 10.265 10.397 2 0.030755 7693 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 48.036 21.343 19708000 0 0 0 1201800 1567000 1278600 1858900 1348500 977320 1840300 2240400 2570000 2408900 0 2415900 8832 4264 8040 73920;73921;73922;73923;73924;73925;73926;73927;73928;73929;73930 58611;58612 58612 2 DQLSQSIVMYK Oxidation (M) 1326.649 0.64895222 28 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 0 1 0 By MS/MS 2 0 1 1 64.411 58.504 2 1.1998E-06 75135 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.96 105.53 46481000 0 46481000 0 0 0 0 0 0 0 0 0 0 0 0 0 8833 28 8041 73931 58613;58614 58614 25 2 DQLSQSIVMYK Unmodified 1310.654 0.6540376 28 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 68.843 67.848 2 0.026262 77249 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 40.331 24.088 126830000 0 108370000 0 0 0 4893900 0 0 0 3949900 5261100 0 0 4357600 0 8834 28 8041 73932;73933;73934;73935;73936 58615;58616 58616 2 DQLTDLSNSLEK Unmodified 1361.6674 0.66743906 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 0 By MS/MS 2 0 1 1 72.872 67.327 2 0.0086764 85225 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.066 49.722 39579000 0 39579000 0 0 0 0 0 0 0 0 0 0 0 0 0 8835 2446 8042 73937 58617 58617 1 DQLVGLGR Unmodified 856.47667 0.47666558 624 O95163 IKBKAP Elongator complex protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 44.031 44.354 2 0.0096192 49607 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 82.305 4.931 49057000 0 0 0 0 0 14468000 0 0 0 18973000 0 15616000 0 0 0 8836 624 8043 73938;73939;73940 58618;58619;58620;58621 58619 4 DQLVYPLLAFTR Unmodified 1434.7871 0.78710068 5169 Q9Y3I1 FBXO7 F-box only protein 7 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 95.721 95.875 2 0.0020068 111143 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.297 54.344 3379900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3379900 8837 5169 8044 73941;73942 58622;58623 58623 2 DQMDDLRAQILGGANTPYEK Oxidation (M) 2250.0587 0.058660451 4547 Q9NPD8 UBE2T Ubiquitin-conjugating enzyme E2 T yes yes 0 1 1 By MS/MS By MS/MS By matching 7.33 3.77 1 2 1 1 1 74.576 73.014 3 4.2073E-09 90371 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.969 77.866 50722000 0 35577000 0 0 0 8887300 0 0 6258100 0 0 0 0 0 0 8838 4547 8045 73943;73944;73945 58624;58625 58625 5960 2 DQMDDLRAQILGGANTPYEK Unmodified 2234.0637 0.063745829 4547 Q9NPD8 UBE2T Ubiquitin-conjugating enzyme E2 T yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 84.183 78.887 3 0.00046961 97725 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 48.112 40.308 12859000 9028500 0 3830700 0 0 0 0 0 0 0 0 0 0 0 0 8839 4547 8045 73946;73947 58626;58627 58627 1 DQMEGSPNSSESFEHIAR Oxidation (M) 2035.8541 0.85414698 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 44.102 44.183 3 6.5182E-07 49573 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 77.39 75.593 179540000 0 0 0 21677000 19183000 17658000 0 0 21305000 34495000 0 0 22854000 13565000 28800000 8840 5216 8046 73948;73949;73950;73951;73952;73953;73954;73955 58628;58629;58630;58631;58632;58633;58634;58635;58636;58637 58635 6618 10 DQMEGSPNSSESFEHIAR Unmodified 2019.8592 0.85923236 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 50.466 50.421 3 1.5162E-37 56926 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 100.77 95.771 94974000 0 0 0 8463700 8711700 0 6614200 23986000 0 0 0 0 0 0 47198000 8841 5216 8046 73956;73957;73958;73959;73960 58638;58639;58640;58641;58642;58643 58638 6 DQMQPGGTAISVTVPYR Unmodified 1818.8934 0.89343302 2916 Q6P1J9 CDC73 Parafibromin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 2 2 1 1 2 2 2 2 2 2 2 75.868 75.975 2;3 2.7198E-41 87734 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 148.62 138.38 192660000 0 0 0 0 8694600 12005000 4284100 6381700 10122000 19567000 20964000 25533000 14222000 23785000 47099000 8842 2916 8047 73961;73962;73963;73964;73965;73966;73967;73968;73969;73970;73971;73972;73973;73974;73975;73976;73977;73978;73979;73980 58644;58645;58646;58647;58648;58649;58650;58651;58652;58653;58654;58655;58656;58657;58658;58659 58645 13 DQMQPGGTAISVTVPYR Oxidation (M) 1834.8883 0.88834765 2916 Q6P1J9 CDC73 Parafibromin yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 1 1 2 1 2 2 2 1 1 2 2 71.767 71.881 2;3 7.4498E-32 82330 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 122.45 108.21 307920000 0 0 0 4160700 15668000 10827000 24477000 12633000 21105000 40282000 36539000 37613000 14871000 41864000 47882000 8843 2916 8047 73981;73982;73983;73984;73985;73986;73987;73988;73989;73990;73991;73992;73993;73994;73995;73996;73997;73998 58660;58661;58662;58663;58664;58665;58666;58667;58668;58669;58670;58671;58672;58673;58674;58675 58662 4542 7 DQNESLDEEMFYK Unmodified 1646.677 0.67701747 3735 Q96AC1 FERMT2 Fermitin family homolog 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 74.628 67.986 2 2.9837E-21 86609 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 169.65 169.65 48279000 9231300 39048000 0 0 0 0 0 0 0 0 0 0 0 0 0 8844 3735 8048 73999;74000 58676;58677 58676 2 DQNESLDEEMFYK Oxidation (M) 1662.6719 0.67193209 3735 Q96AC1 FERMT2 Fermitin family homolog 2 yes yes 0 1 0 By MS/MS 2 0 1 1 59.318 53.476 2 0.036512 68878 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 50.09 35.399 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8845 3735 8048 74001 58678 58678 1 DQNETLDEDLFHK Unmodified 1602.7162 0.71618016 4100 Q9BQL6 FERMT1 Fermitin family homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 69.055 63.42 3 0.00077615 80901 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.891 50.725 101730000 21342000 78381000 2010800 0 0 0 0 0 0 0 0 0 0 0 0 8846 4100 8049 74002;74003;74004;74005 58679;58680;58681 58679 2 DQNGNHVVQK Unmodified 1137.5527 0.55268407 2425;3479 Q14671;Q8TB72 PUM1;PUM2 Pumilio homolog 1;Pumilio homolog 2 no no 0 0 0 By MS/MS 2.5 0.5 1 1 2 6.2809 2.9801 2 0.00084602 5019 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.19 63.483 33081000 0 33081000 0 0 0 0 0 0 0 0 0 0 0 0 0 8847 2425;3479 8050 74006;74007 58682;58683 58682 2 DQNIFVQK Unmodified 990.51345 0.51344502 1708 P53004 BLVRA Biliverdin reductase A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 41.237 40.094 2 0.0044499 45323 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 110.63 83.671 1376400000 31949000 1133900000 2058900 10326000 7173300 15416000 10736000 11910000 7430000 14408000 25948000 28599000 13460000 19841000 43283000 8848 1708 8051 74008;74009;74010;74011;74012;74013;74014;74015;74016;74017;74018;74019;74020;74021;74022;74023 58684;58685;58686;58687;58688;58689;58690;58691;58692;58693;58694;58695;58696;58697;58698;58699;58700 58694 9 DQNILLGTTYR Unmodified 1292.6725 0.67246486 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.838 67.92 2 3.8234E-148 78437 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 225.87 205.88 576040000 0 0 0 36881000 29182000 54807000 34939000 36637000 23887000 46138000 57501000 68399000 53187000 49389000 85096000 8849 1986 8052 74024;74025;74026;74027;74028;74029;74030;74031;74032;74033;74034;74035 58701;58702;58703;58704;58705;58706;58707;58708;58709;58710;58711;58712;58713;58714;58715 58715 14 DQNILTVDNVK Unmodified 1257.6565 0.65648044 4750 Q9NYU1 UGGT2 UDP-glucose:glycoprotein glucosyltransferase 2 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 58.672 58.577 2 0.043188 65770 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 46.001 32.965 8355800 0 0 0 0 2064400 2469100 0 0 0 0 0 0 0 3822400 0 8850 4750 8053 74036;74037;74038 58716 58716 1 DQNPEQLAGVGQGR Unmodified 1467.7066 0.70661853 5041 Q9UNS1 TIMELESS Protein timeless homolog yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 43.781 44.529 2 0.011907 48825 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.385 57.432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8851 5041 8054 74039;74040 58717;58718 58717 2 DQNTVETLQR Unmodified 1202.5891 0.58912916 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 29.296 29.608 2 0.0019244 32317 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 87.639 30.462 24106000 0 0 0 3532700 0 3624700 0 0 0 0 5054300 5050900 0 0 6843500 8852 2047 8055 74041;74042;74043;74044;74045 58719;58720;58721 58719 3 DQNVFDSK Unmodified 951.42977 0.42977497 578 O76094 SRP72 Signal recognition particle subunit SRP72 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 25.425 25.628 2 0.0095736 25844 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.452 73.63 392600000 0 0 0 27109000 21989000 35102000 37960000 34807000 27231000 34789000 32918000 30828000 37598000 29356000 42915000 8853 578 8056 74046;74047;74048;74049;74050;74051;74052;74053;74054;74055;74056;74057 58722;58723;58724;58725;58726;58727;58728;58729;58730;58731 58724 9 DQNYPGAIAIHHPNVAEK Unmodified 1972.9755 0.97552317 75 CON__P15636 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.26 2.31 107 5 1089 45 27 40 106 97 71 94 89 78 93 83 93 101 90 94 81.376 81.399 2;3;4 7.0903E-128 57227 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 224.55 176.54 + 857510000000 1404200000 487190000 177620000 62609000000 51467000000 93897000000 61840000000 59860000000 31845000000 76208000000 86216000000 95321000000 79835000000 72204000000 84133000000 8854 75 8057 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59681 1341 DQNYPGAIAIHHPNVAEKR Unmodified 2129.0766 0.076634197 75 CON__P15636 yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.22 2.33 3 1 36 2 1 1 4 3 3 4 4 3 3 3 2 2 2 3 46.123 46.103 2;3;4;5 5.8764E-43 52686 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 124.26 50.539 + 35290000000 5617400 616140 352750 2759300000 1129700000 4819200000 2817800000 4170500000 4154000000 1100200000 1886200000 3222900000 1772300000 1378100000 6073200000 8855 75 8058 75259;75260;75261;75262;75263;75264;75265;75266;75267;75268;75269;75270;75271;75272;75273;75274;75275;75276;75277;75278;75279;75280;75281;75282;75283;75284;75285;75286;75287;75288;75289;75290;75291;75292;75293;75294;75295;75296;75297;75298 60308;60309;60310;60311;60312;60313;60314;60315;60316;60317;60318;60319;60320;60321;60322;60323;60324;60325;60326;60327;60328;60329;60330;60331;60332;60333;60334;60335;60336;60337;60338;60339;60340;60341;60342 60338 22 DQNYVEIMGR Oxidation (M) 1239.5554 0.55538619 2283 Q13416 ORC2 Origin recognition complex subunit 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 42.091 42.195 2 0.0029596 47090 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 72.643 49.215 34574000 0 0 0 2643500 3325800 3764400 3424900 0 6397700 3395100 3602600 4295600 3724700 0 0 8856 2283 8059 75299;75300;75301;75302;75303;75304;75305;75306;75307 60343;60344;60345;60346;60347 60346 3714 5 DQNYVEIMGR Unmodified 1223.5605 0.56047157 2283 Q13416 ORC2 Origin recognition complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.198 61.298 2 0.00076823 69790 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 120.12 108.53 80363000 0 0 0 3392100 4661900 5513800 3638600 7549700 4282200 9357900 7382700 9580200 5844600 6909600 12250000 8857 2283 8059 75308;75309;75310;75311;75312;75313;75314;75315;75316;75317;75318;75319 60348;60349;60350;60351;60352;60353;60354;60355;60356;60357;60358 60356 11 DQNYVEIMGRDVQESLK Unmodified 2022.9681 0.96805453 2283 Q13416 ORC2 Origin recognition complex subunit 2 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 87.242 83.21 3 3.6487E-19 103646 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.44 88.495 22801000 0 22801000 0 0 0 0 0 0 0 0 0 0 0 0 0 8858 2283 8060 75320;75321 60359 60359 1 DQPAFTPSGILTPHALGSR Unmodified 1964.0116 0.011574324 4323 Q9H0D6 XRN2 5'-3' exoribonuclease 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 81.142 81.184 3 0.013145 93604 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 28.505 13.267 83283000 0 0 0 3492200 4160700 5617600 4476500 0 7227300 10534000 10274000 11921000 8445800 0 17134000 8859 4323 8061 75322;75323;75324;75325;75326;75327;75328;75329;75330;75331 60360;60361;60362 60360 2 DQPPNSVEGLLNALR Unmodified 1621.8424 0.84238373 4654 Q9NUQ9 FAM49B Protein FAM49B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 93.154 93.307 2 0.0011512 108303 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.062 70.679 8042900 0 0 0 0 0 0 0 0 0 1939500 1312300 0 0 0 4791000 8860 4654 8062 75332;75333;75334 60363 60363 1 DQPQFQNMR Oxidation (M) 1178.5139 0.51385572 1745 P54725 RAD23A UV excision repair protein RAD23 homolog A yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 20.816 21.14 2 0.032195 20711 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.396 28.725 24616000 0 0 0 1448200 0 0 1952600 0 0 0 4426100 5238900 0 4321800 7228200 8861 1745 8063 75335;75336;75337;75338;75339;75340 60364 60364 1 DQPVELLNPAR Unmodified 1250.6619 0.66190017 1784 P56524 HDAC4 Histone deacetylase 4 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 66.771 66.875 2 0.021836 75749 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 61.691 46.929 14318000 0 0 0 0 0 3202800 0 0 0 4250500 0 0 3915600 2949300 0 8862 1784 8064 75341;75342;75343;75344 60365 60365 0 DQPYLWAR Unmodified 1047.5138 0.51377937 3373 Q8N999 C12orf29 Uncharacterized protein C12orf29 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 63.332 63.435 2 0.02509 72475 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 58.981 42.827 42190000 0 0 0 0 3357400 4123800 4321900 0 3877200 4718300 0 0 4753000 9440000 7598100 8863 3373 8065 75345;75346;75347;75348;75349;75350;75351;75352 60366;60367 60366 2 DQQEAEK Unmodified 846.37193 0.37192574 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS 1 0 1 1 106.2 111.47 2 0.022382 92079 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 107.32 17.644 27851000 27851000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8864 2392 8066 75353 60368 60368 1 DQQIGEK Unmodified 816.39775 0.39774656 1590 P49736 MCM2 DNA replication licensing factor MCM2 yes yes 0 0 0 By MS/MS 1 0 1 1 106.59 111.85 2 0.01448 92555 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 120.65 20.726 70657000 70657000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8865 1590 8067 75354 60369 60369 1 DQQNTSRLVQEHK Unmodified 1581.7859 0.78593148 318 O43318 MAP3K7 Mitogen-activated protein kinase kinase kinase 7 yes yes 0 0 1 By MS/MS 2 0 1 1 19.195 16.595 3 0.019569 20950 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 43.382 29.703 12832000 0 0 12832000 0 0 0 0 0 0 0 0 0 0 0 0 8866 318 8068 75355 60370 60370 1 DQQPGTFLLR Unmodified 1173.6142 0.6142217 1448 P42224 STAT1 Signal transducer and activator of transcription 1-alpha/beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 70.272 70.067 2 0.009388 80959 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 57.859 50.629 30209000 0 0 0 7577200 6005400 0 8143700 0 0 0 0 0 8482400 0 0 8867 1448 8069 75356;75357;75358;75359 60371;60372 60372 1 DQQPQMELPLQGCNITYIPK Unmodified 2372.1505 0.15045235 3339 Q8N556 AFAP1 Actin filament-associated protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 90.9 86.003 3 2.5446E-05 106882 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 42.711 35.265 16290000 0 16290000 0 0 0 0 0 0 0 0 0 0 0 0 0 8868 3339 8070 75360 60373;60374 60373 2 DQQVLDVK Unmodified 943.49746 0.4974606 4857 Q9UBT2 UBA2 SUMO-activating enzyme subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.5 3.2 1 2 1 2 1 1 36.741 32.83 2 0.013643 36676 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.877 18.123 104360000 35422000 2402700 0 0 0 0 0 0 0 0 0 0 0 0 66535000 8869 4857 8071 75361;75362;75363;75364 60375;60376;60377 60376 2 DQREEELGEYYMK Unmodified 1688.7352 0.73520105 136 O00267 SUPT5H Transcription elongation factor SPT5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 55.874 56.05 3 0.0087556 63557 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 31.389 28.134 20465000 0 0 0 0 0 3265500 2703700 5157600 0 4980500 4357700 0 0 0 0 8870 136 8072 75365;75366;75367;75368;75369 60378;60379;60380 60380 3 DQRSLDIDTAK Unmodified 1260.631 0.63099397 4145 Q9BTE7 DCUN1D5 DCN1-like protein 5 yes yes 0 0 1 By MS/MS 3 0 1 1 34.351 29.838 3 1.8682E-09 37176 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 111.52 89.521 53463000 0 53463000 0 0 0 0 0 0 0 0 0 0 0 0 0 8871 4145 8073 75370 60381 60381 1 DQRSLDINTAK Unmodified 1259.647 0.64697839 3625 Q92564 DCUN1D4 DCN1-like protein 4 yes yes 0 0 1 By MS/MS 3 0 1 1 32.101 27.66 3 2.0733E-05 34610 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 92.943 71.643 9121600 0 9121600 0 0 0 0 0 0 0 0 0 0 0 0 0 8872 3625 8074 75371 60382 60382 1 DQSAVVVQGLPEGVAFK Unmodified 1742.9203 0.9202997 1977 P78347 GTF2I General transcription factor II-I yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 82.945 83.007 2;3 8.5691E-111 96307 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 237.21 216.43 2021600000 0 0 0 55683000 126100000 167660000 100590000 97881000 90211000 197600000 215140000 249310000 206450000 233030000 281990000 8873 1977 8075 75372;75373;75374;75375;75376;75377;75378;75379;75380;75381;75382;75383;75384;75385;75386;75387;75388;75389;75390;75391;75392;75393;75394;75395 60383;60384;60385;60386;60387;60388;60389;60390;60391;60392;60393;60394;60395;60396;60397;60398 60395 15 DQSDFVGQTVELGELR Unmodified 1791.8639 0.86390703 234 O14976 GAK Cyclin-G-associated kinase yes yes 0 0 0 By MS/MS 10 0 1 1 82.798 82.995 3 0.0015862 96120 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 34.395 0.3011 16032000 0 0 0 0 0 0 0 0 0 0 16032000 0 0 0 0 8874 234 8076 75396 60399 60399 1 DQSGVQELVK Unmodified 1101.5666 0.5666028 2904 Q6NXE6 ARMC6 Armadillo repeat-containing protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 2 43.365 43.698 2 0.0023993 49400 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 83.998 62.47 118420000 0 0 0 0 0 13691000 8944300 9020500 0 18675000 16852000 0 11952000 3581200 35705000 8875 2904 8077 75397;75398;75399;75400;75401;75402;75403;75404;75405 60400;60401;60402;60403;60404 60400 5 DQSIMDVLK Unmodified 1047.527 0.52704617 3014 Q6ZT12 UBR3 E3 ubiquitin-protein ligase UBR3 yes yes 0 0 0 By MS/MS 2 0 1 1 80.675 75.963 2 0.020613 94552 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.043 49.593 38413000 0 38413000 0 0 0 0 0 0 0 0 0 0 0 0 0 8876 3014 8078 75406 60405 60405 1 DQSLQEELAR Unmodified 1187.5782 0.57823012 1359 P35609 ACTN2 Alpha-actinin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 7.302 7.4134 3 0.016748 5698 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 44.318 32.398 42214000 0 0 0 0 7646400 8114300 0 9460100 5183500 468280 11341000 0 0 0 0 8877 1359 8079 75407;75408;75409;75410;75411;75412 60406 60406 1 DQSSWQNSDASQEVGGHQER Unmodified 2243.9428 0.94277907 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 34.093 34.225 3 2.4286E-109 37534 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 179.95 179.95 272580000 0 0 0 17443000 15286000 21385000 19014000 19391000 14576000 29779000 35605000 0 25954000 21574000 52572000 8878 4285 8080 75413;75414;75415;75416;75417;75418;75419;75420;75421;75422;75423 60407;60408;60409;60410;60411;60412;60413;60414;60415;60416;60417;60418;60419;60420 60409 14 DQSTEQSPSDLPQRK Unmodified 1714.8122 0.81220581 3893 Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 22.342 22.578 3 0.00044594 23694 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 45.614 42.775 37832000 0 0 0 5271700 3170500 0 0 0 0 0 0 10718000 10817000 0 7853900 8879 3893 8081 75424;75425;75426;75427;75428 60421;60422;60423;60424;60425 60422 5 DQTDFEHR Unmodified 1046.4417 0.44173664 861 P08237 PFKM ATP-dependent 6-phosphofructokinase, muscle type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.439 13.595 2 0.0081134 12659 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 87.323 40.971 90592000 0 0 0 4036700 5272400 8363800 7075500 4487900 5398700 9078500 8442100 11095000 11514000 8156000 7671300 8880 861 8082 75429;75430;75431;75432;75433;75434;75435;75436;75437;75438;75439;75440 60426;60427;60428;60429;60430;60431;60432;60433;60434;60435;60436 60432 10 DQTDFEHRIPK Unmodified 1384.6735 0.67352749 861 P08237 PFKM ATP-dependent 6-phosphofructokinase, muscle type yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 4 18 2 1 1 1 2 1 1 2 1 2 1 2 1 2 2 38.313 37.959 2;3 0.0004297 41984 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 78.653 50.447 2045500000 113970000 159740 257300000 72475000 79851000 102250000 98931000 171810000 112070000 142070000 167640000 212920000 153160000 139060000 221820000 8881 861 8083 75441;75442;75443;75444;75445;75446;75447;75448;75449;75450;75451;75452;75453;75454;75455;75456;75457;75458;75459;75460;75461;75462 60437;60438;60439;60440;60441;60442;60443;60444;60445;60446;60447;60448;60449;60450;60451;60452;60453;60454;60455;60456;60457;60458;60459;60460;60461 60456 24 DQTIVDPFSSK Unmodified 1235.6034 0.60338224 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 69.001 69.146 2 0.00055755 79101 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 81.338 65.135 49593000 0 0 0 0 3186900 4987900 3226000 2544900 1821900 4858800 6032900 6031800 4057300 5212100 7632700 8882 5071 8084 75463;75464;75465;75466;75467;75468;75469;75470;75471;75472;75473 60462;60463;60464;60465;60466;60467;60468;60469;60470;60471;60472;60473 60469 12 DQTKPTPLILDEQGR Unmodified 1709.8948 0.89481323 323 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 16 2 1 1 2 1 1 2 2 1 2 1 57.818 57.879 2;3 6.148E-27 65972 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 106.6 97.894 699470000 0 0 0 54627000 46608000 45540000 69028000 61707000 51242000 95979000 118950000 27122000 112790000 15874000 0 8883 323 8085 75474;75475;75476;75477;75478;75479;75480;75481;75482;75483;75484;75485;75486;75487;75488;75489 60474;60475;60476;60477;60478;60479;60480;60481;60482;60483;60484;60485;60486;60487;60488;60489;60490;60491;60492 60485 18 DQTKPTPLILDEQGRTVDATGK Unmodified 2382.2391 0.23906766 323 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.68 1.57 1 24 1 2 2 2 2 2 2 2 2 2 2 2 2 60.131 60.083 3;4 8.9968E-25 67744 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 85.248 78.26 364260000 0 0 6125300 15049000 16507000 24122000 29217000 41086000 24251000 37849000 40514000 39728000 25176000 23052000 41588000 8884 323 8086 75490;75491;75492;75493;75494;75495;75496;75497;75498;75499;75500;75501;75502;75503;75504;75505;75506;75507;75508;75509;75510;75511;75512;75513;75514 60493;60494;60495;60496;60497;60498;60499;60500;60501;60502;60503;60504;60505;60506;60507;60508;60509;60510;60511;60512;60513;60514;60515;60516 60508 21 DQTPDENDQVIVK Unmodified 1499.7104 0.71036651 4768 Q9NZI8 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 39.181 39.44 2 2.0578E-07 43434 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 99.568 78.698 59203000 0 0 0 0 2555400 4862200 0 5981200 3367500 5228700 5986800 9814400 7047800 6603200 7755700 8885 4768 8087 75515;75516;75517;75518;75519;75520;75521;75522;75523;75524 60517;60518;60519;60520;60521;60522;60523;60524;60525;60526;60527 60526 11 DQTPDENDQVVVK Unmodified 1485.6947 0.69471644 153 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 33.726 33.973 2 4.8807E-07 36969 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 96.015 81.596 85485000 0 0 0 0 6877000 4743100 6606000 0 4474200 8497500 12194000 11039000 13179000 8456100 9418800 8886 153 8088 75525;75526;75527;75528;75529;75530;75531;75532;75533;75534;75535 60528;60529;60530;60531;60532;60533;60534;60535;60536;60537;60538 60533 11 DQTPLQLSVEDTTSPNTK Unmodified 1972.9589 0.95892963 3216 Q8IUC6 TICAM1 TIR domain-containing adapter molecule 1 yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By matching 10 0 6 1 1 1 1 1 1 69.472 69.651 2 0.00069631 80208 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.211 37.783 17098000 0 0 0 0 0 3804900 3035800 2150900 0 0 0 0 2334300 2941200 2830600 8887 3216 8089 75536;75537;75538;75539;75540;75541 60539 60539 1 DQTVYIVLDK Unmodified 1192.634 0.63395408 379 O43913 ORC5 Origin recognition complex subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.806 71.928 2 0.0028825 82695 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 79.148 69.119 67730000 0 0 0 0 4639000 4586400 4417400 0 5435400 7898300 7309200 10493000 5670100 8529900 8750700 8888 379 8090 75542;75543;75544;75545;75546;75547;75548;75549;75550;75551;75552;75553 60540;60541;60542;60543;60544;60545;60546;60547;60548;60549;60550;60551 60541 12 DQVANSAFVER Unmodified 1234.5942 0.59421454 850 P07900 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41.298 40.592 2 1.6521E-47 45575 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 187.99 141.57 7954600000 12593000 375050000 0 316310000 272440000 749400000 432390000 376110000 259800000 670830000 940990000 738880000 556330000 570000000 1683500000 8889 850 8091 75554;75555;75556;75557;75558;75559;75560;75561;75562;75563;75564;75565;75566;75567 60552;60553;60554;60555;60556;60557;60558;60559;60560;60561;60562;60563;60564;60565;60566;60567;60568 60562 17 DQVDIAVQELLQLK Unmodified 1610.8879 0.88793694 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.44 0.497 5 4 3 4 2 98.675 94.65 2;3 6.3882E-46 116924 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 218.62 197.75 544610000 105800000 419360000 19451000 0 0 0 0 0 0 0 0 0 0 0 0 8890 848 8092 75568;75569;75570;75571;75572;75573;75574;75575;75576 60569;60570;60571;60572;60573;60574;60575;60576;60577;60578;60579;60580;60581;60582 60570 13 DQVEDYALRK Unmodified 1235.6146 0.61461563 4049 Q99707 MTR Methionine synthase yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 40.056 35.622 3 0.0013349 46504 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.655 62.563 53845000 0 51287000 2557900 0 0 0 0 0 0 0 0 0 0 0 0 8891 4049 8093 75577;75578;75579 60583;60584 60583 2 DQVELVENMVTVGK Unmodified 1559.7865 0.78650834 4568 Q9NQE9 HINT3 Histidine triad nucleotide-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 82.676 82.713 2 0.0017669 95352 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 67.153 57.2 13338000 0 0 0 983760 0 2029700 0 2074600 4630500 0 3619200 0 0 0 0 8892 4568 8094 75580;75581;75582;75583;75584;75585 60585;60586;60587;60588;60589 60587 5 DQVELVENMVTVGK Oxidation (M) 1575.7814 0.78142296 4568 Q9NQE9 HINT3 Histidine triad nucleotide-binding protein 3 yes yes 0 1 0 By matching By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 66.916 67.067 2 0.0036721 77283 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 44.188 34.235 8054200 0 0 0 0 0 0 0 1508300 1780100 2437500 0 0 2328300 0 0 8893 4568 8094 75586;75587;75588;75589 60590 60590 5976 1 DQVEYLVQQNVIPPFCNLLSVK Unmodified 2602.3465 0.34650962 163 O00505 KPNA3 Importin subunit alpha-4 yes yes 0 0 0 By MS/MS 2 0 1 1 100.04 95.327 3 0.029737 117838 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 27.408 23.604 6052000 0 6052000 0 0 0 0 0 0 0 0 0 0 0 0 0 8894 163 8095 75590 60591 60591 0 DQVFIFLK Unmodified 1008.5644 0.56441796 2189 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 86.45 86.558 2 0.029218 100471 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 56.27 37.539 69807000 0 0 0 0 4387000 8257700 5539600 3892800 8061700 0 6684900 6713300 6280100 6248200 13742000 8895 2189 8096 75591;75592;75593;75594;75595;75596;75597;75598;75599;75600 60592 60592 1 DQVGEDNWQQFSEQFPPLLK Unmodified 2404.1335 0.13353995 215 O14787 TNPO2 Transportin-2 yes yes 0 0 0 By MS/MS 2 0 1 1 97.634 92.861 3 2.3444E-23 114934 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.41 99.121 38347000 0 38347000 0 0 0 0 0 0 0 0 0 0 0 0 0 8896 215 8097 75601 60593;60594 60593 2 DQVLAMLEK Oxidation (M) 1061.5427 0.54269624 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 14 1 2 1 1 2 2 1 1 2 1 55.834 55.843 2 0.0080261 64604 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 61.691 20.913 60240000 0 0 0 3198100 7165100 4694300 4960500 8061000 7722400 5837600 6890900 0 6422900 5287600 0 8897 2361 8098 75602;75603;75604;75605;75606;75607;75608;75609;75610;75611;75612;75613;75614;75615 60595;60596;60597;60598;60599;60600;60601 60600 3844 7 DQVLAMLEK Unmodified 1045.5478 0.54778161 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 75.281 74.975 2 0.0044876 86488 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 86.67 61.776 147970000 0 51122000 0 4532300 6487300 8507800 4468100 6469500 6209900 10762000 10027000 10386000 7806800 7571700 13616000 8898 2361 8098 75616;75617;75618;75619;75620;75621;75622;75623;75624;75625;75626;75627;75628 60602;60603;60604;60605;60606;60607;60608;60609;60610 60607 8 DQVLHEHIQR Unmodified 1273.6527 0.65273247 2463 Q14C86 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 22.229 22.455 3 0.012105 23674 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 37.968 26.102 41082000 0 0 0 2848500 0 7858400 0 0 0 7488300 6428700 0 0 0 16458000 8899 2463 8099 75629;75630;75631;75632;75633 60611;60612;60613;60614 60611 4 DQVLQNLGSVESYSEEK Unmodified 1923.9062 0.90616578 3101 Q7Z4S6 KIF21A Kinesin-like protein KIF21A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 75.461 75.497 2 1.8652E-13 87124 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 114.56 85.799 77573000 0 0 0 4397100 4188000 8267800 4496600 5251800 5031900 8072200 11266000 15404000 5429400 5767700 0 8900 3101 8100 75634;75635;75636;75637;75638;75639;75640;75641;75642;75643;75644 60615;60616;60617;60618;60619;60620;60621;60622;60623;60624;60625;60626 60626 12 DQVMLALK Unmodified 916.50519 0.50518852 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 61.236 61.312 2 0.020609 68953 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 62.659 22.996 35886000 0 0 0 1936700 3780500 3927600 0 4662800 0 0 4598400 5865600 0 4296800 6817500 8901 2556 8101 75645;75646;75647;75648;75649;75650;75651;75652 60627;60628 60628 2 DQVRTETEPIPENTPTK Unmodified 1953.9643 0.96434936 2970 Q6T4R5 NHS Nance-Horan syndrome protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 2 1 1 40.025 39.391 3 0.00058107 44063 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 53.519 41.027 74876000 0 17804000 0 3944300 4255100 5307900 4054300 0 0 6019100 6619800 13617000 5248600 0 8005900 8902 2970 8102 75653;75654;75655;75656;75657;75658;75659;75660;75661;75662;75663;75664 60629;60630;60631;60632;60633;60634;60635 60632 7 DQVTAGAMQR Oxidation (M) 1091.503 0.50295669 1988 P78549 NTHL1 Endonuclease III-like protein 1 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 10.845 10.961 2 0.0058467 9503 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 58.981 27.691 31145000 0 0 0 3407600 1850400 2718800 3529700 1982500 1734400 2443600 0 5521400 2800900 1904500 3250900 8903 1988 8103 75665;75666;75667;75668;75669;75670;75671;75672;75673;75674;75675 60636;60637;60638;60639;60640;60641 60641 3243 3 DQVTAGAMQR Unmodified 1075.508 0.50804206 1988 P78549 NTHL1 Endonuclease III-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 21.568 22.225 2 0.0061036 22726 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 66.27 44.139 15618000 0 0 0 0 0 0 0 0 0 0 0 7740000 0 0 7877600 8904 1988 8103 75676;75677;75678;75679 60642;60643;60644 60644 3 DQVTAQEIFQDNHEDGPTAK Unmodified 2242.0138 0.013818748 974 P13010 XRCC5 X-ray repair cross-complementing protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.56 3.54 6 5 23 1 9 1 1 2 2 2 2 1 2 2 2 3 2 2 63.208 61.497 2;3 2.3677E-112 75077 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 188.6 185.36 2961500000 135960000 1427700000 48794000 59287000 50084000 95641000 77800000 76765000 60405000 110410000 152560000 174320000 100480000 106300000 284980000 8905 974 8104 75680;75681;75682;75683;75684;75685;75686;75687;75688;75689;75690;75691;75692;75693;75694;75695;75696;75697;75698;75699;75700;75701;75702;75703;75704;75705;75706;75707;75708;75709;75710;75711;75712;75713 60645;60646;60647;60648;60649;60650;60651;60652;60653;60654;60655;60656;60657;60658;60659;60660;60661;60662;60663;60664;60665;60666;60667;60668;60669;60670;60671;60672;60673;60674;60675;60676;60677 60662 33 DQVTYQQLR Unmodified 1149.5778 0.57783619 1802 P58107 EPPK1 Epiplakin yes yes 0 0 0 By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 37.616 37.856 2 0.012125 41889 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 71.379 47.951 49456000 0 0 0 2234800 0 3548900 3806800 5027800 2694300 3580400 4500200 8229500 7523800 2629700 5679600 8906 1802 8105 75714;75715;75716;75717;75718;75719;75720;75721;75722;75723;75724 60678;60679 60678 2 DQVYPQYVIEYTEDK Unmodified 1888.8731 0.87307474 3073 Q7Z2W4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 80.952 81.01 2 0.00028688 93665 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 63.76 56.036 22525000 0 0 0 0 1938200 3844300 3912200 6768800 6061100 0 0 0 0 0 0 8907 3073 8106 75725;75726;75727;75728;75729 60680;60681;60682;60683;60684 60683 5 DQYANYVVQK Unmodified 1226.5932 0.5931519 2425;3479 Q14671;Q8TB72 PUM1;PUM2 Pumilio homolog 1;Pumilio homolog 2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.697 42.874 2 3.3932E-10 47786 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 159.46 132.33 593550000 0 0 0 28918000 38104000 42175000 46525000 53985000 46405000 43307000 65535000 58418000 65204000 55265000 49708000 8908 2425;3479 8107 75730;75731;75732;75733;75734;75735;75736;75737;75738;75739;75740;75741 60685;60686;60687;60688;60689;60690;60691;60692;60693;60694;60695;60696 60690 9 DQYEQMAEK Unmodified 1140.4757 0.47573888 70 CON__P08779;P08779;CON__Q9Z2K1;CON__Q3ZAW8 KRT16 Keratin, type I cytoskeletal 16 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 24.273 24.557 2 0.0081922 26225 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 70.332 65.425 + 102920000 0 0 0 20010000 0 0 0 9856600 0 6034000 3191600 3287000 57263000 3277700 0 8909 70 8108 75742;75743;75744;75745;75746;75747;75748 60697;60698;60699 60699 3 DQYEQMAEK Oxidation (M) 1156.4707 0.47065351 70 CON__P08779;P08779;CON__Q9Z2K1;CON__Q3ZAW8 KRT16 Keratin, type I cytoskeletal 16 yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 10.795 10.871 2 0.0034036 9278 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 81.548 57.393 + 16623000 0 0 0 4398800 0 0 1639100 1471000 0 1164100 0 0 7949800 0 0 8910 70 8108 75749;75750;75751;75752;75753 60700;60701 60701 85 2 DQYFMQR Unmodified 986.428 0.42800083 4365 Q9H2G2 SLK STE20-like serine/threonine-protein kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 39.973 40.396 2 0.023354 43914 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.673 48.171 27118000 0 0 0 0 0 5229200 0 0 0 5094900 0 6023800 0 0 10770000 8911 4365 8109 75754;75755;75756;75757 60702 60702 1 DRAATSPALFNR Unmodified 1317.6789 0.67894722 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 42.802 43.154 3 0.00033099 48516 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 78.903 63.013 96646000 0 0 0 0 0 15281000 0 19229000 7213900 0 0 18213000 13823000 7333000 15552000 8912 2392 8110 75758;75759;75760;75761;75762;75763;75764 60703;60704;60705;60706;60707 60703 4 DRAEEPMATEPAPAGAPGDLGSQPPAAK Unmodified 2730.2919 0.29190786 465 O75153 CLUH Clustered mitochondria protein homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 59.992 60.283 3 9.4195E-11 68160 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.357 39.577 28820000 0 0 0 0 0 4800900 0 0 0 0 7064200 0 0 6263200 10692000 8913 465 8111 75765;75766;75767;75768 60708;60709;60710;60711;60712 60710 5 DRASQQQQTNSIR Unmodified 1530.7499 0.74988033 448 O60934 NBN Nibrin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 8.6827 8.8161 3 0.0004322 7302 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 74.769 61.35 108300000 0 0 0 6333800 4171900 5356300 6017700 4188700 4381200 7609400 23962000 14014000 9080300 6370200 16812000 8914 448 8112 75769;75770;75771;75772;75773;75774;75775;75776;75777;75778;75779;75780 60713;60714;60715;60716;60717;60718;60719;60720;60721;60722;60723;60724 60722 11 DRCTLAEK Unmodified 991.47568 0.4756793 1165 P23528 CFL1 Cofilin-1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 9.6725 6.6181 2 0.031889 10932 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 124.08 39.165 1553100000 650690000 0 902440000 0 0 0 0 0 0 0 0 0 0 0 0 8915 1165 8113 75781;75782 60725;60726 60725 0 DRDPEAQFEMPYVVR Oxidation (M) 1866.857 0.85704752 208 O14744 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed yes yes 0 1 1 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 64.573 64.479 3 0.00039556 73976 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 58.885 52.332 36592000 0 0 0 5888800 0 8013200 0 6046800 0 0 0 0 16643000 0 0 8916 208 8114 75783;75784;75785;75786 60727;60728;60729 60728 278 3 DRDPEAQFEMPYVVR Unmodified 1850.8621 0.8621329 208 O14744 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed yes yes 0 0 1 By MS/MS 10 0 1 1 77.968 78.233 3 0.012739 89949 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.147 43.06 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8917 208 8114 75787 60730 60730 1 DRDSQITAIEK Unmodified 1274.6466 0.64664404 3366 Q8N7H5 PAF1 RNA polymerase II-associated factor 1 homolog yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.08 2.56 3 23 1 1 1 2 1 2 2 2 2 2 2 2 2 2 2 31.249 30.882 2;3 1.3678E-05 39181 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.52 55.74 830240000 9706700 14503000 2797200 32166000 15456000 53713000 52537000 50391000 47344000 64552000 89839000 99970000 93027000 91121000 113110000 8918 3366 8115 75788;75789;75790;75791;75792;75793;75794;75795;75796;75797;75798;75799;75800;75801;75802;75803;75804;75805;75806;75807;75808;75809;75810;75811;75812;75813 60731;60732;60733;60734;60735;60736;60737;60738;60739;60740;60741;60742;60743 60735 11 DRDVQDETYR Unmodified 1295.5742 0.57420737 5258 Q9Y606 PUS1 tRNA pseudouridine synthase A, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 15.103 15.291 3 0.033814 14420 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 37.613 21.724 49869000 0 0 0 2616700 1395900 2224000 0 2362600 1671000 3664600 8902100 6285400 7457600 4754200 8535000 8919 5258 8116 75814;75815;75816;75817;75818;75819;75820;75821;75822;75823;75824 60744 60744 1 DRDVTFSPATIENELIK Unmodified 1946.9949 0.99492121 1758 P55145 MANF Mesencephalic astrocyte-derived neurotrophic factor yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 92.068 86.65 3 4.4478E-26 109758 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 99.392 89.018 257150000 77033000 180120000 0 0 0 0 0 0 0 0 0 0 0 0 0 8920 1758 8117 75825;75826;75827 60745;60746;60747;60748 60747 4 DREAAEGLGSHDR Unmodified 1411.644 0.64401827 1057 P17655 CAPN2 Calpain-2 catalytic subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 11.327 11.471 3 0.00029889 10310 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 79.804 70.849 272600000 0 0 0 12391000 9652500 26385000 13514000 17183000 13379000 25766000 18208000 28483000 37635000 26898000 43111000 8921 1057 8118 75828;75829;75830;75831;75832;75833;75834;75835;75836;75837;75838;75839 60749;60750;60751;60752;60753;60754;60755;60756;60757;60758;60759;60760;60761 60760 9 DREAAEGLGSHDRAIK Unmodified 1723.8602 0.86015906 1057 P17655 CAPN2 Calpain-2 catalytic subunit yes yes 0 0 2 By MS/MS 2 0 1 1 27.786 22.397 4 0.0033746 31541 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.537 38.097 83738000 83738000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8922 1057 8119 75840 60762 60762 1 DREALFNEFVAAAR Unmodified 1607.8056 0.80560429 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 83.623 83.687 3 2.6746E-05 96382 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.753 81.557 105820000 0 0 0 2387400 601080 5276000 3895100 9241700 13843000 6971100 7956400 11177000 4529500 7239000 32707000 8923 213 8120 75841;75842;75843;75844;75845;75846;75847;75848;75849;75850;75851;75852 60763;60764;60765;60766;60767;60768;60769;60770;60771;60772;60773;60774;60775 60768 13 DREDYVPYTGEK Unmodified 1470.6627 0.66268803 4746 Q9NYL9 TMOD3 Tropomodulin-3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.05 2 19 2 1 1 2 2 1 2 1 2 2 2 1 2 39.681 39.449 2;3 3.626E-07 43484 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 134.56 94.56 656540000 0 38209000 0 8619700 37721000 50114000 39990000 31219000 48178000 45706000 91169000 86772000 67097000 32025000 79718000 8924 4746 8121 75853;75854;75855;75856;75857;75858;75859;75860;75861;75862;75863;75864;75865;75866;75867;75868;75869;75870;75871;75872;75873 60776;60777;60778;60779;60780;60781;60782;60783;60784;60785 60784 2 DREEALHQFR Unmodified 1299.632 0.63199703 170 O00571;O15523 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 26.996 27.682 3 0.037784 28860 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.971 33.285 310210000 0 0 0 0 0 0 0 0 0 0 0 181560000 0 0 128650000 8925 170 8122 75874;75875 60786 60786 0 DREEDEEDAYER Unmodified 1554.607 0.60702365 1596 P49756 RBM25 RNA-binding protein 25 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.977 19.173 3 0.0025901 18431 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.797 46.29 86705000 0 0 0 5547700 5011300 6231700 4905200 4532000 6233100 10151000 9897900 10391000 5994100 6491900 11319000 8926 1596 8123 75876;75877;75878;75879;75880;75881;75882;75883;75884;75885;75886;75887 60787;60788;60789;60790;60791;60792;60793;60794;60795;60796 60790 10 DRELQALRDR Unmodified 1270.6742 0.67419619 378 O43896 KIF1C Kinesin-like protein KIF1C yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 26.694 26.791 3 0.047776 28598 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 59.57 37.914 50486000 0 0 0 0 0 13383000 8694100 9197400 12038000 7173400 0 0 0 0 0 8927 378 8124 75888;75889;75890;75891;75892 60797 60797 0 DRELQQAELPNRSPGFGIK Unmodified 2154.1182 0.11816466 2902 Q6NWY9 PRPF40B Pre-mRNA-processing factor 40 homolog B yes yes 0 0 2 By MS/MS 10 0 1 1 62.198 62.77 4 0.003121 71075 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.156 22.872 8805500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8805500 8928 2902 8125 75893 60798 60798 1 DREQPSEGATELR Unmodified 1486.7012 0.7011988 3657 Q92766 RREB1 Ras-responsive element-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 2 1 2 2 23.193 23.392 2;3 0.0151 23897 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 49.482 35.324 141710000 0 0 0 4089200 4920800 9997000 9784400 11852000 7647900 14922000 14265000 15830000 14135000 13395000 20872000 8929 3657 8126 75894;75895;75896;75897;75898;75899;75900;75901;75902;75903;75904;75905;75906;75907;75908;75909;75910;75911;75912;75913;75914;75915;75916 60799;60800;60801 60801 2 DREREPEAASSR Unmodified 1401.6597 0.65966834 2702 Q53GS9 USP39 U4/U6.U5 tri-snRNP-associated protein 2 yes yes 0 0 2 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 6.2489 6.404 3 0.0054119 3634 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.466 58.166 63582000 0 0 0 0 4448400 0 7539900 4806300 3794400 5516600 6928900 11919000 0 6101500 12527000 8930 2702 8127 75917;75918;75919;75920;75921;75922;75923;75924;75925 60802 60802 0 DREVNAVDSEHEK Unmodified 1526.6961 0.69611342 1006 P14735 IDE Insulin-degrading enzyme yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.6 3.67 6 14 3 1 2 2 1 1 1 1 1 1 2 1 1 2 11.262 10.366 3;4 3.9508E-05 8327 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 87.863 80.493 503770000 189590000 29003000 45262000 87323000 3743900 9378700 6506000 4984300 0 8387400 17444000 24760000 4855700 22777000 49751000 8931 1006 8128 75926;75927;75928;75929;75930;75931;75932;75933;75934;75935;75936;75937;75938;75939;75940;75941;75942;75943;75944;75945 60803;60804;60805;60806;60807;60808;60809;60810;60811;60812;60813;60814;60815;60816;60817;60818;60819;60820 60814 15 DRFMAPDIEAAHR Oxidation (M) 1543.7202 0.72016011 1456 P42357 HAL Histidine ammonia-lyase yes yes 0 1 1 By MS/MS By matching By matching By matching By matching By matching 10 0 7 2 1 1 1 1 1 46.669 46.588 3;4 0.001071 52893 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 55.335 42.355 98927000 0 0 0 80448000 1769600 4711400 0 4644800 0 2948300 0 4405100 0 0 0 8932 1456 8129 75946;75947;75948;75949;75950;75951;75952 60821;60822 60821 2289 1 DRFVNDYDK Unmodified 1170.5306 0.53055165 2400 Q14257 RCN2 Reticulocalbin-2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.277 26.477 3 0.013457 27777 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 45.158 41.236 80063000 0 0 0 3604200 3794700 5646600 4097900 4288900 3221200 6647800 7330500 15219000 6530100 6589300 13093000 8933 2400 8130 75953;75954;75955;75956;75957;75958;75959;75960;75961;75962;75963;75964 60823;60824 60824 1 DRGLTEFPADLQK Unmodified 1488.7573 0.75725712 3378 Q8N9N7 LRRC57 Leucine-rich repeat-containing protein 57 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 64.609 64.853 3 0.032103 74187 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 30.961 18.335 59483000 0 0 0 0 0 5994700 0 0 4441900 7819300 9193800 9016500 5625200 6583300 10808000 8934 3378 8131 75965;75966;75967;75968;75969;75970;75971;75972 60825;60826 60826 2 DRGRCAPASSSVPAEAELAGEGISVNTGPK Unmodified 2982.4465 0.44651103 2277 Q13371 PDCL Phosducin-like protein yes yes 0 0 2 By MS/MS 2 0 1 1 76.467 68.336 4 4.0942E-16 90048 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.603 67.447 29191000 29191000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8935 2277 8132 75973 60827 60827 1 DRGVAASAGSSGENK Unmodified 1404.6593 0.65933399 1347 P35249 RFC4 Replication factor C subunit 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.43 3.14 5 1 24 2 3 1 2 2 2 2 2 2 2 2 2 2 2 2 7.1342 6.5878 2;3 3.2627E-112 4467 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 204.28 181.54 600920000 15654000 48523000 1967700 21889000 25790000 40901000 26564000 31898000 40225000 54078000 85345000 43752000 55219000 40533000 68580000 8936 1347 8133 75974;75975;75976;75977;75978;75979;75980;75981;75982;75983;75984;75985;75986;75987;75988;75989;75990;75991;75992;75993;75994;75995;75996;75997;75998;75999;76000;76001;76002;76003 60828;60829;60830;60831;60832;60833;60834;60835;60836;60837;60838;60839;60840;60841;60842;60843;60844;60845;60846;60847;60848;60849;60850 60835 19 DRGVAASAGSSGENKK Unmodified 1532.7543 0.75429701 1347 P35249 RFC4 Replication factor C subunit 4 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5.9395 5.6365 3 6.0329E-29 3950 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 136.63 132.57 937110000 280520000 0 88605000 54941000 29898000 32179000 59257000 27615000 29899000 46562000 58865000 65119000 46428000 47088000 70136000 8937 1347 8134 76004;76005;76006;76007;76008;76009;76010;76011;76012;76013;76014;76015;76016;76017 60851;60852;60853;60854;60855;60856;60857;60858;60859;60860;60861;60862;60863;60864 60861 14 DRHEASGFAR Unmodified 1144.5374 0.53736836 3874 Q96I25 RBM17 Splicing factor 45 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 8.8655 8.9869 3 0.0018666 7804 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 68.355 56.762 118890000 0 0 0 9254000 6593200 7430200 11300000 7534500 6403200 7882300 27510000 0 12061000 7722600 15203000 8938 3874 8135 76018;76019;76020;76021;76022;76023;76024;76025;76026;76027;76028 60865;60866;60867;60868;60869;60870;60871;60872;60873;60874 60867 6 DRHGSSSVELR Unmodified 1241.6113 0.61126158 95 CON__Q5D862;Q5D862 FLG2 Filaggrin-2 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 2 1 1 1 1 1 1 1 1 11.71 11.766 3 0.0025052 10115 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.604 39.35 + 89063000 0 0 0 36625000 3988500 3906300 6579100 7327900 3017600 4618000 0 16039000 6961100 0 0 8939 95 8136 76029;76030;76031;76032;76033;76034;76035;76036;76037;76038 60875;60876;60877 60876 3 DRIESLEK Unmodified 988.51892 0.51892433 4010 Q99459 CDC5L Cell division cycle 5-like protein yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 25.556 21.946 2 0.015129 28917 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.35 53.543 67583000 0 34290000 33293000 0 0 0 0 0 0 0 0 0 0 0 0 8940 4010 8137 76039;76040 60878 60878 1 DRINDDLISEFPDK Unmodified 1675.8053 0.80532952 2213 Q12959;Q15700 DLG1;DLG2 Disks large homolog 1;Disks large homolog 2 yes no 0 0 1 By MS/MS 2 0 1 1 79.853 71.723 3 0.046112 94264 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.237 36.91 15214000 15214000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8941 2213 8138 76041 60879 60879 0 DRIVSMTLDK Unmodified 1176.6173 0.61725816 3326;3563 Q8N3U4;Q8WVM7 STAG2;STAG1 Cohesin subunit SA-2;Cohesin subunit SA-1 no no 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 47.855 48.079 2;3 1.573E-07 66858 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 164.48 101.08 38662000 0 0 0 0 2500200 4591500 3279800 0 0 5052800 0 5377500 4298900 3989600 9572000 8942 3326;3563 8139 76042;76043;76044;76045;76046;76047;76048;76049;76050 60880;60881;60882 60882 2 DRLAQSDMAK Unmodified 1133.5499 0.54990688 1707 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 0 0 1 By MS/MS 10 0 1 1 14.65 15.122 2 0.01617 13888 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 117.52 62.456 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8943 1707 8140 76051 60883 60883 1 DRLEFWCTDVK Unmodified 1467.6816 0.68164933 5036 Q9UNM6 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 74.847 73.897 3 0.0087217 95045 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.301 41.243 64558000 24844000 0 0 2139900 0 9574800 0 0 1963800 2778200 3493000 10540000 0 0 9224300 8944 5036 8141 76052;76053;76054;76055;76056;76057;76058;76059 60884;60885;60886 60885 3 DRLGNRPEMNYK Unmodified 1491.7252 0.72524548 4442 Q9H814 PHAX Phosphorylated adapter RNA export protein yes yes 0 0 2 By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 28.11 28.346 3 0.0096053 29574 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.393 44.52 146380000 0 0 0 0 8230500 6419300 0 7826000 6296800 13811000 0 30160000 24178000 19194000 30263000 8945 4442 8142 76060;76061;76062;76063;76064;76065;76066;76067;76068 60887;60888 60887 0 DRLGSYSGPTSVSR Unmodified 1480.727 0.72701962 4257 Q9BZ23 PANK2 Pantothenate kinase 2, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 37.517 37.589 3 0.002368 40924 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 35.711 17.638 251230000 0 0 0 22222000 44963000 47156000 0 0 0 26920000 46310000 63660000 0 0 0 8946 4257 8143 76069;76070;76071;76072;76073;76074 60889;60890;60891 60890 3 DRLLASTLVHSVK Unmodified 1437.8304 0.83036248 4742 Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 61.348 61.602 3 0.00068913 69781 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 66.246 47.002 85723000 0 0 0 0 0 6444100 0 7644400 6820400 5781000 5689600 10039000 6729900 10744000 25830000 8947 4742 8144 76075;76076;76077;76078;76079;76080;76081;76082;76083 60892;60893;60894;60895;60896;60897;60898;60899;60900 60900 9 DRLPDAAAPESLPGQGR Unmodified 1748.8806 0.88056015 2706 Q53LP3 SOWAHC Ankyrin repeat domain-containing protein SOWAHC yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 54.355 54.483 3 0.00015966 62331 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 65.231 56.632 163650000 0 0 0 13566000 9100000 15149000 13187000 0 11403000 12560000 16378000 17557000 16344000 11515000 26892000 8948 2706 8145 76084;76085;76086;76087;76088;76089;76090;76091;76092;76093;76094 60901;60902;60903;60904;60905;60906;60907;60908;60909;60910;60911;60912;60913 60912 13 DRLPLESAVVR Unmodified 1253.7092 0.70918471 1238 P28715 ERCC5 DNA repair protein complementing XP-G cells yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 61.289 61.43 3 0.0032835 70174 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 48.948 40.844 48081000 0 0 0 0 3635900 6268900 4077500 4753900 3127700 0 6162300 0 6785700 4805900 8463400 8949 1238 8146 76095;76096;76097;76098;76099;76100;76101;76102;76103 60914;60915;60916;60917;60918 60918 5 DRLVPGPVFGSK Unmodified 1270.7034 0.70337105 2208 Q12907 LMAN2 Vesicular integral-membrane protein VIP36 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.171 62.269 3 0.0023101 71183 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 60.401 51.914 101610000 0 0 0 4785300 4788600 9111200 7486800 7026300 6132200 9705600 7368100 11964000 10857000 8109100 14280000 8950 2208 8147 76104;76105;76106;76107;76108;76109;76110;76111;76112;76113;76114;76115 60919;60920;60921;60922;60923;60924;60925;60926;60927;60928;60929 60920 8 DRLVTLEEFLK Unmodified 1361.7555 0.7554662 1992 P80303 NUCB2 Nucleobindin-2;Nesfatin-1 yes yes 0 0 1 By MS/MS 2 0 1 1 93.235 85.104 3 0.0036786 110301 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.172 38.432 3053900 3053900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8951 1992 8148 76116 60930 60930 1 DRMLEILEGK Oxidation (M) 1218.6278 0.62782285 1974 P78344 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 2 2 2 1 1 1 1 1 2 51.838 52.083 2;3 0.00062288 58815 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 88.441 79.026 607350000 0 0 0 0 25336000 146630000 0 24512000 112070000 43059000 52995000 51451000 51442000 40063000 59794000 8952 1974 8149 76117;76118;76119;76120;76121;76122;76123;76124;76125;76126;76127;76128;76129;76130 60931;60932;60933;60934;60935;60936;60937;60938;60939;60940;60941 60939 3167 9 DRMLEILEGK Unmodified 1202.6329 0.63290823 1974 P78344 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 74.73 73.885 3 0.0014808 95949 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.507 65.762 56829000 14896000 0 0 0 0 0 1999700 3671500 5064600 0 0 5554600 2714700 4961000 17967000 8953 1974 8149 76131;76132;76133;76134;76135;76136;76137;76138 60942;60943;60944;60945;60946;60947 60944 6 DRNDFWEGIK Unmodified 1278.5993 0.59929991 2734 Q5JSH3 WDR44 WD repeat-containing protein 44 yes yes 0 0 1 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 64.919 65.197 3 0.0067459 73857 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.44 41.78 12795000 0 0 0 0 0 1763200 0 0 0 0 0 2581400 1736900 0 6713300 8954 2734 8150 76139;76140;76141;76142 60948 60948 1 DRNENEVESTSSANEDMPVER Unmodified 2407.0194 0.019374411 1095 P19793 RXRA Retinoic acid receptor RXR-alpha yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 40.647 40.827 3 1.1974E-59 44543 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 130.83 121.65 103580000 0 0 0 6370400 4650100 8381100 8393000 0 6062700 10224000 10499000 11777000 10611000 9999100 16614000 8955 1095 8151 76143;76144;76145;76146;76147;76148;76149;76150;76151;76152;76153 60949;60950;60951;60952;60953;60954;60955;60956;60957;60958;60959;60960 60953 12 DRNENEVESTSSANEDMPVER Oxidation (M) 2423.0143 0.014289033 1095 P19793 RXRA Retinoic acid receptor RXR-alpha yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 28.434 28.688 3 2.6154E-12 30884 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 83.395 75.592 37207000 0 0 0 0 2902100 0 0 0 0 7236500 7827800 10464000 8776100 0 0 8956 1095 8151 76154;76155;76156;76157;76158 60961;60962;60963;60964 60961 1571 4 DRNWDDIESK Unmodified 1276.5684 0.56839372 2759 Q5SW79;Q96L14 CEP170;CEP170P1 Centrosomal protein of 170 kDa;Cep170-like protein yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 36.264 36.314 3 0.0083394 40293 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 41.598 37.424 30706000 0 0 0 2562900 2593100 4323400 3428800 2410700 0 0 3408600 0 5617800 6360600 0 8957 2759 8152 76159;76160;76161;76162;76163;76164;76165;76166 60965;60966 60965 2 DRPASGSPFQLFLSK Unmodified 1648.8573 0.85730551 4002 Q96T88 UHRF1 E3 ubiquitin-protein ligase UHRF1 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 85.272 85.375 3 0.0056363 98650 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 27.526 23.135 8137200 0 0 0 0 0 3018300 0 0 0 0 0 0 0 0 5118900 8958 4002 8153 76167;76168 60967 60967 1 DRPENVHGGILADDMGLGK Oxidation (M) 2008.9636 0.96363785 2411 Q14527 HLTF Helicase-like transcription factor yes yes 0 1 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 2 1 2 2 2 1 1 2 2 2 1 48.861 49.022 3;4 4.4264E-42 55586 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 121.21 111.11 1464800000 0 0 0 37321000 70354000 93026000 106630000 97295000 154500000 91881000 117540000 252000000 195560000 131800000 116890000 8959 2411 8154 76169;76170;76171;76172;76173;76174;76175;76176;76177;76178;76179;76180;76181;76182;76183;76184;76185;76186;76187 60968;60969;60970;60971;60972;60973;60974;60975;60976;60977;60978;60979;60980;60981;60982;60983 60970 3957 6 DRPENVHGGILADDMGLGK Unmodified 1992.9687 0.96872323 2411 Q14527 HLTF Helicase-like transcription factor yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 66.476 64.679 3 0.00011444 72245 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.045 46.901 53825000 11963000 0 0 0 0 0 0 3922500 0 0 0 0 0 3744400 34195000 8960 2411 8154 76188;76189;76190;76191 60984;60985;60986 60984 3 DRPFFAGLVK Unmodified 1148.6342 0.63422886 1022 P15531 NME1 Nucleoside diphosphate kinase A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 2 1 2 2 76.256 76.313 2;3 0.013387 87307 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 129.85 58.932 6831700000 0 0 0 175080000 182040000 724730000 488610000 1118500000 1403800000 456660000 551640000 1366000000 17429000 52016000 295230000 8961 1022 8155 76192;76193;76194;76195;76196;76197;76198;76199;76200;76201;76202;76203;76204;76205;76206;76207;76208;76209;76210;76211;76212;76213;76214 60987;60988;60989;60990;60991;60992;60993;60994;60995;60996;60997;60998;60999;61000;61001;61002;61003 60995 11 DRPFFPGLVK Unmodified 1174.6499 0.64987892 1138 P22392;O60361 NME2;NME2P1 Nucleoside diphosphate kinase B;Putative nucleoside diphosphate kinase yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 4 32 2 2 2 3 4 3 3 4 3 3 4 1 1 1 75.7 75.401 2;3 0.0014336 85909 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 105.4 48.965 15044000000 22063000 14221000 0 474210000 451280000 1681000000 1772000000 2765000000 2869200000 981830000 1129600000 2579500000 28285000 43668000 232210000 8962 1138 8156 76215;76216;76217;76218;76219;76220;76221;76222;76223;76224;76225;76226;76227;76228;76229;76230;76231;76232;76233;76234;76235;76236;76237;76238;76239;76240;76241;76242;76243;76244;76245;76246;76247;76248;76249;76250 61004;61005;61006;61007;61008;61009;61010;61011;61012;61013;61014;61015;61016;61017;61018;61019;61020;61021;61022;61023;61024;61025;61026;61027;61028;61029;61030;61031;61032;61033;61034;61035;61036;61037;61038;61039;61040;61041;61042;61043 61023 34 DRPGGSMVVSDVVPGGPAEGR Unmodified 2037.9902 0.99018696 616 O95049 TJP3 Tight junction protein ZO-3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 65.819 65.894 3 0.010692 75517 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 26.318 21.513 57578000 0 0 0 3437700 3884700 5670600 3055100 4503300 4335100 5322800 6444100 4787800 5782800 0 10354000 8963 616 8157 76251;76252;76253;76254;76255;76256;76257;76258;76259;76260;76261 61044;61045;61046;61047 61045 4 DRPQEADGIDSVIVVDNVPQVGPDRLEK Unmodified 3059.5524 0.55235631 1776 P55884 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 0 0 2 By MS/MS By MS/MS By MS/MS 3.8 3.12 3 1 1 3 1 1 83.626 80.827 4 5.5222E-47 98741 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 110.08 103.71 176830000 149490000 0 14221000 0 0 0 0 0 0 0 0 0 0 0 13119000 8964 1776 8158 76262;76263;76264;76265;76266 61048;61049;61050;61051 61051 4 DRPSAAHIVEALETDV Unmodified 1721.8584 0.85842773 3905 Q96KB5 PBK Lymphokine-activated killer T-cell-originated protein kinase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 89.567 84.413 3 0.0031654 106454 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 42.813 30.258 144090000 93442000 49837000 809420 0 0 0 0 0 0 0 0 0 0 0 0 8965 3905 8159 76267;76268;76269 61052;61053 61052 2 DRPVSQPSLVGSK Unmodified 1368.7361 0.73612775 4393 Q9H4A3 WNK1 Serine/threonine-protein kinase WNK1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.17 3.33 6 1 23 2 3 2 2 2 2 2 2 2 2 2 1 2 2 2 33.899 32.878 2;3 4.2201E-10 34999 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 120.57 95.188 1107200000 158490000 37333000 29907000 47724000 44276000 68690000 65581000 85840000 53513000 88168000 87635000 57483000 100070000 74334000 108140000 8966 4393 8160 76270;76271;76272;76273;76274;76275;76276;76277;76278;76279;76280;76281;76282;76283;76284;76285;76286;76287;76288;76289;76290;76291;76292;76293;76294;76295;76296;76297;76298;76299 61054;61055;61056;61057;61058;61059;61060;61061;61062;61063;61064;61065;61066;61067;61068;61069;61070;61071;61072;61073;61074;61075;61076;61077 61068 20 DRPVSQPSLVGSKEEPPPAR Unmodified 2145.1178 0.11783031 4393 Q9H4A3 WNK1 Serine/threonine-protein kinase WNK1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 40.999 41.358 4 0.0015959 46281 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 40.756 32.366 31870000 0 0 0 0 0 0 10158000 0 0 0 0 13911000 5039700 2761300 0 8967 4393 8161 76300;76301;76302;76303 61078 61078 1 DRRYADLTEDQLPSCESLK Unmodified 2295.0801 0.080124175 1077 P18669 PGAM1 Phosphoglycerate mutase 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS 2.3 0.458 7 3 7 2 1 67.62 61.227 3;4 7.9589E-102 83148 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 163.79 126.93 1019400000 903460000 45355000 70564000 0 0 0 0 0 0 0 0 0 0 0 0 8968 1077 8162 76304;76305;76306;76307;76308;76309;76310;76311;76312;76313 61079;61080;61081;61082;61083;61084;61085;61086;61087;61088;61089;61090;61091;61092 61088 13 DRSAEETFQLSR Unmodified 1437.6848 0.68482046 125 O00186 STXBP3 Syntaxin-binding protein 3 yes yes 0 0 1 By MS/MS 10 0 1 1 44.273 44.323 3 0.027311 49853 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 47.189 40.756 4880000 0 0 0 0 0 4880000 0 0 0 0 0 0 0 0 0 8969 125 8163 76314 61093 61093 0 DRSEEERTTEAEK Unmodified 1578.7122 0.71215742 1198 P26038 MSN Moesin yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.46 3.69 8 1 19 5 2 2 2 1 1 2 1 2 2 1 1 2 2 2 6.3016 5.3778 2;3;4 1.2014E-103 6276 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 207.52 178.22 2741500000 1102100000 152870000 1005500000 11977000 7178400 9354300 12335000 7604700 8771600 11734000 87847000 58464000 15806000 61645000 188280000 8970 1198 8164 76315;76316;76317;76318;76319;76320;76321;76322;76323;76324;76325;76326;76327;76328;76329;76330;76331;76332;76333;76334;76335;76336;76337;76338;76339;76340;76341;76342 61094;61095;61096;61097;61098;61099;61100;61101;61102;61103;61104;61105;61106;61107;61108;61109;61110 61100 14 DRSSFYVNGLTLGGQK Unmodified 1740.8795 0.87949752 846 P07737 PFN1 Profilin-1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.27 3.62 2 2 7 3 1 1 2 1 1 2 75.2 73.215 2;3 7.2599E-70 84761 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 182.02 118.29 1694300000 872740000 2081400 0 0 0 0 0 0 0 5329600 161620000 26502000 0 18249000 607770000 8971 846 8165 76343;76344;76345;76346;76347;76348;76349;76350;76351;76352;76353 61111;61112;61113;61114;61115;61116;61117;61118;61119 61119 9 DRTQQGFPTVK Unmodified 1275.6571 0.65714914 604 O94916 NFAT5 Nuclear factor of activated T-cells 5 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 38.736 33.708 3 0.015092 46894 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.843 31.584 21151000 17985000 0 3166600 0 0 0 0 0 0 0 0 0 0 0 0 8972 604 8166 76354;76355 61120;61121 61120 2 DRTSGNVEDDLIIFPDDCEFK Unmodified 2484.1115 0.11148388 2597 Q16186 ADRM1 Proteasomal ubiquitin receptor ADRM1 yes yes 0 0 1 By MS/MS By matching By MS/MS 2.5 0.5 2 2 2 1 1 90.444 86.11 3 1.4839E-10 108667 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 92.098 70.234 88386000 72965000 5226900 10194000 0 0 0 0 0 0 0 0 0 0 0 0 8973 2597 8167 76356;76357;76358;76359 61122;61123;61124;61125 61123 4 DRVAILVDDMADTCGTICHAADK Unmodified 2546.1563 0.15634236 1818;957 P60891;P11908 PRPS1;PRPS2 Ribose-phosphate pyrophosphokinase 1;Ribose-phosphate pyrophosphokinase 2 no no 0 0 1 By MS/MS 2.5 0.5 1 1 2 84.194 78.297 3 8.6115E-68 100625 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 124.81 116.91 71343000 71343000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8974 1818;957 8168 76360;76361 61126;61127 61127 2 DRVALSNMNVIDR Unmodified 1501.7671 0.7671103 1771 P55786;A6NEC2 NPEPPS;NPEPPSL1 Puromycin-sensitive aminopeptidase;Puromycin-sensitive aminopeptidase-like protein yes no 0 0 1 By MS/MS 10 0 1 1 61.37 61.95 3 0.024043 70024 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.227 20.8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8975 1771 8169 76362 61128 61128 1 DRVEASSLPEVR Unmodified 1356.6997 0.69974224 2684 Q4G0J3 LARP7 La-related protein 7 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 44.197 44.072 3 0.023792 48321 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 27.409 18.582 16257000 0 0 0 0 5778500 0 0 0 0 0 0 0 0 10479000 0 8976 2684 8170 76363;76364 61129 61129 1 DRVEISPEQLSAASTEAER Unmodified 2087.0131 0.013090467 1506 P46736 BRCC3 Lys-63-specific deubiquitinase BRCC36 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 66.311 66.445 3 0.00045175 76551 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 49.188 42.465 82638000 0 0 0 4450600 0 7339600 6827500 0 3343000 8933900 10752000 9820500 8565100 5543500 17062000 8977 1506 8171 76365;76366;76367;76368;76369;76370;76371;76372;76373;76374 61130;61131;61132;61133;61134;61135;61136;61137 61135 7 DRVHHEPQLSDK Unmodified 1459.7168 0.71678929 376 O43852 CALU Calumenin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 11.773 11.916 3 0.002601 9614 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.371 85.726 130820000 0 0 0 2422600 0 4982300 6414500 7119000 4363800 6708000 0 25073000 9654600 19326000 44755000 8978 376 8172 76375;76376;76377;76378;76379;76380;76381;76382;76383;76384 61138;61139;61140;61141;61142;61143;61144 61139 5 DRVNDVCTNGQDLIK Unmodified 1745.8366 0.83664643 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS 2.67 0.471 1 2 3 52.397 47.203 2;3 1.4092E-14 61162 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.21 119.08 66770000 0 66770000 0 0 0 0 0 0 0 0 0 0 0 0 0 8979 2344 8173 76385;76386;76387 61145;61146 61145 2 DRVRDVFEAK Unmodified 1233.6466 0.64658446 964 P12268 IMPDH2 Inosine-5'-monophosphate dehydrogenase 2 yes yes 0 0 2 By MS/MS 2 0 1 1 43.033 36.24 3 0.041182 50038 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.113 50.199 37471000 37471000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8980 964 8174 76388 61147 61147 0 DRVTDALNATR Unmodified 1230.6317 0.63166267 930 P10809 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 40.779 40.957 2;3 1.2753E-35 45554 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 182.35 118.93 3686400000 0 0 0 215420000 251040000 318110000 269180000 251470000 188850000 385480000 344610000 413330000 358160000 217620000 473100000 8981 930 8175 76389;76390;76391;76392;76393;76394;76395;76396;76397;76398;76399;76400;76401;76402;76403;76404;76405;76406;76407;76408;76409;76410;76411;76412 61148;61149;61150;61151;61152;61153;61154;61155;61156;61157;61158;61159;61160;61161;61162;61163;61164;61165;61166;61167;61168 61158 16 DRVTGQHQGYGFVEFLSEEDADYAIK Unmodified 2973.3781 0.37808033 2533 Q15427 SF3B4 Splicing factor 3B subunit 4 yes yes 0 0 1 By MS/MS 2.5 0.5 2 2 4 92.547 86.719 3;4 5.3034E-56 110911 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 120.85 117.91 119130000 119130000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8982 2533 8176 76413;76414;76415;76416 61169;61170;61171;61172;61173;61174 61173 6 DRYDSFIELQEK Unmodified 1541.7362 0.73618733 4625 Q9NSD9 FARSB Phenylalanine--tRNA ligase beta subunit yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 73.638 67.932 3 0.00022614 88780 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 92.856 83.407 67529000 51168000 0 16361000 0 0 0 0 0 0 0 0 0 0 0 0 8983 4625 8177 76417;76418 61175;61176;61177;61178 61175 4 DRYGGQPLFSEK Unmodified 1395.6783 0.67827852 2645 Q1KMD3 HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.2 2.4 2 18 1 1 1 1 2 2 1 2 2 2 1 2 1 1 46.825 46.387 2;3 0.00015441 52186 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 69.03 63.188 740650000 31876000 0 10216000 35679000 33163000 58305000 45024000 49376000 54070000 82617000 75888000 24182000 102240000 52910000 85100000 8984 2645 8178 76419;76420;76421;76422;76423;76424;76425;76426;76427;76428;76429;76430;76431;76432;76433;76434;76435;76436;76437;76438 61179;61180;61181;61182;61183;61184;61185;61186;61187;61188;61189;61190;61191;61192;61193;61194;61195 61185 14 DRYYGINDPVADK Unmodified 1524.7209 0.72087161 4690 Q9NW64 RBM22 Pre-mRNA-splicing factor RBM22 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 2 1 1 2 52.195 50.897 2;3 5.2538E-18 56828 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 171.99 126.02 545390000 14172000 171420000 73240000 18836000 19705000 23050000 22962000 15380000 0 17292000 39070000 0 24253000 24410000 81595000 8985 4690 8179 76439;76440;76441;76442;76443;76444;76445;76446;76447;76448;76449;76450;76451;76452;76453;76454 61196;61197;61198;61199;61200;61201;61202;61203;61204;61205;61206 61198 8 DSAAPSPIPGADNLSADPVVSPPTSIPFK Unmodified 2846.4338 0.4338043 2768 Q5T1M5 FKBP15 FK506-binding protein 15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 91.151 91.26 3 2.0393E-07 105928 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 37.44 30.791 50558000 0 0 0 0 2387100 2692400 1831600 3103500 2186200 8488500 5064600 7072900 0 4087400 13644000 8986 2768 8180 76455;76456;76457;76458;76459;76460;76461;76462;76463;76464 61207;61208;61209;61210;61211;61212;61213;61214;61215;61216;61217 61207 11 DSAGVPAPAPDSALDSAPTPASAPAPAPALAQAPALSPSLASAPEEAK Unmodified 4400.2024 0.20235439 3072 Q7Z2T5 TRMT1L TRMT1-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 89.799 89.901 4 9.1969E-06 103646 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 18.845 17.68 32557000 0 0 0 0 2837900 2243600 0 2492300 1337800 5653100 4746600 4400600 0 2374800 6469800 8987 3072 8181 76465;76466;76467;76468;76469;76470;76471;76472;76473 61218;61219;61220;61221;61222;61223;61224;61225;61226 61224 9 DSAHGFLK Unmodified 873.43447 0.43446642 763 P02787 TF Serotransferrin yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 24.823 25.13 2 0.011784 26265 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 76.134 42.396 275600000 0 0 0 44140000 0 0 0 35865000 0 43135000 0 30761000 47153000 35171000 39372000 8988 763 8182 76474;76475;76476;76477;76478;76479;76480 61227 61227 1 DSAHLMNGPISQTTSQTSSIPPLSQVPATK Oxidation (M) 3108.5397 0.53974271 3640 Q92615 LARP4B La-related protein 4B yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 75.772 75.95 3 5.46E-20 87713 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 54.732 49.901 34043000 0 0 0 0 0 0 0 0 0 0 13806000 11433000 8803500 0 0 8989 3640 8183 76481;76482;76483 61228;61229;61230 61230 5142 3 DSAIGFSR Unmodified 851.41373 0.41373097 764 P02788 LTF Lactotransferrin;Lactoferricin-H;Kaliocin-1;Lactoferroxin-A;Lactoferroxin-B;Lactoferroxin-C yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 35.374 35.469 2 0.010849 38943 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 78.324 31.403 39083000 0 0 0 0 2002300 2381200 3435900 0 0 19971000 3839600 0 7453200 0 0 8990 764 8184 76484;76485;76486;76487;76488;76489 61231;61232 61231 2 DSAIPVESDTDDEGAPR Unmodified 1772.7701 0.77006623 3790 Q96D46 NMD3 60S ribosomal export protein NMD3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.359 47.524 2 3.1424E-41 53223 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 148.18 145.96 261630000 0 0 0 17858000 14860000 33443000 19327000 16382000 11866000 30910000 29411000 25862000 18427000 17465000 25821000 8991 3790 8185 76490;76491;76492;76493;76494;76495;76496;76497;76498;76499;76500;76501 61233;61234;61235;61236;61237;61238;61239;61240;61241;61242;61243;61244 61237 12 DSAIQQQVANLQMK Unmodified 1572.793 0.7929907 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.89 2.67 2 2 23 4 1 2 2 2 2 2 2 2 2 2 2 2 70.851 70.267 2;3 5.8941E-48 87099 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 184.24 170 618870000 0 407520000 0 6154700 11815000 19454000 10989000 16910000 13636000 18042000 20693000 21926000 15614000 20477000 35644000 8992 2392 8186 76502;76503;76504;76505;76506;76507;76508;76509;76510;76511;76512;76513;76514;76515;76516;76517;76518;76519;76520;76521;76522;76523;76524;76525;76526;76527;76528 61245;61246;61247;61248;61249;61250;61251;61252;61253;61254;61255;61256;61257;61258;61259 61249 15 DSAIQQQVANLQMK Oxidation (M) 1588.7879 0.78790532 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.53 2.94 1 2 12 3 1 1 1 1 1 1 1 1 1 1 1 1 61.234 60.291 2;3 5.149E-34 75478 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 155.53 129.42 156080000 0 74513000 0 4599800 4520800 6566300 7880800 5159900 6247600 7065200 7173000 9449600 7806900 6862900 8230300 8993 2392 8186 76529;76530;76531;76532;76533;76534;76535;76536;76537;76538;76539;76540;76541;76542;76543 61260;61261;61262;61263;61264;61265;61266;61267;61268;61269;61270;61271;61272 61263 3897 8 DSALEFLTQLSR Unmodified 1378.7092 0.70924429 2959 Q6PJG6 BRAT1 BRCA1-associated ATM activator 1 yes yes 0 0 0 By MS/MS 10 0 1 1 94.463 94.609 2 0.019978 109739 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.292 42.643 891450 0 0 0 0 0 0 0 0 0 0 0 0 0 0 891450 8994 2959 8187 76544 61273 61273 1 DSALETLQGQLEEK Unmodified 1559.7679 0.76788138 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 77.255 77.384 2 2.9202E-05 88979 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 109.72 78.243 34231000 0 0 0 0 0 0 7647100 0 10290000 9577300 0 0 6716900 0 0 8995 2459 8188 76545;76546;76547;76548;76549;76550 61274;61275;61276;61277;61278 61276 5 DSALFVK Unmodified 778.4225 0.42250475 4383 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.91 44.082 2 0.020109 49312 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 108.98 51.88 355770000 0 0 0 17431000 21864000 27094000 27834000 20229000 17156000 35469000 47532000 41490000 32213000 23449000 44004000 8996 4383 8189 76551;76552;76553;76554;76555;76556;76557;76558;76559;76560;76561;76562 61279;61280;61281;61282;61283;61284;61285;61286;61287;61288;61289;61290;61291;61292;61293 61287 15 DSALIQMADGNQSQLAMNHLNGQK Oxidation (M) 2599.2119 0.2118834 4960 Q9UKA9 PTBP2 Polypyrimidine tract-binding protein 2 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 75.411 71.157 3 0.00013609 89183 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 51.234 45.632 22129000 0 22129000 0 0 0 0 0 0 0 0 0 0 0 0 0 8997 4960 8190 76563;76564 61294 61294 6304 1 DSALVEESNGTLEEK Unmodified 1619.7526 0.75262525 4936 Q9UJA5 TRMT6 tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 47.955 48.139 2 0.0013915 54194 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 51.998 40.267 35673000 0 0 0 0 2565100 4612200 2029300 2706500 0 3890300 4632000 0 5799600 3669300 5768300 8998 4936 8191 76565;76566;76567;76568;76569;76570;76571;76572;76573 61295;61296;61297;61298 61298 4 DSANLESLAK Unmodified 1046.5244 0.52440364 4072 Q99956 DUSP9 Dual specificity protein phosphatase 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching 10 0 5 1 1 1 1 1 45.573 45.831 2 0.0025236 51840 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 82.75 72.283 21937000 0 0 0 0 4365200 0 5776800 0 0 0 0 3186000 0 0 8608900 8999 4072 8192 76574;76575;76576;76577;76578 61299;61300;61301 61301 3 DSAPELNVSSSETEEDKEEAKPDGEK Unmodified 2819.2469 0.24685097 3157 Q86UV5 USP48 Ubiquitin carboxyl-terminal hydrolase 48 yes yes 0 0 2 By MS/MS 3 0 1 1 44.431 39.624 4 0.04893 49294 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 17.647 15.334 2398200 0 2398200 0 0 0 0 0 0 0 0 0 0 0 0 0 9000 3157 8193 76579 61302 61302 1 DSAPYGEYGSWYK Unmodified 1521.6412 0.64122431 4321 Q9H0B6 KLC2 Kinesin light chain 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 68.999 69.16 2 0.014927 79343 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 40.496 33.29 16269000 0 0 0 0 0 2727200 0 1600700 0 2754000 0 4304200 2739800 2143000 0 9001 4321 8194 76580;76581;76582;76583;76584;76585 61303;61304 61304 2 DSAQCAAIAER Unmodified 1190.535 0.5349851 3975 Q96RS6 NUDCD1 NudC domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 24.516 24.825 2 0.0053919 25791 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 75.197 65.983 40034000 0 0 0 2740300 0 5020000 0 0 0 3807800 4155500 5626100 4228500 4600300 9855500 9002 3975 8195 76586;76587;76588;76589;76590;76591;76592;76593;76594 61305;61306;61307;61308;61309;61310;61311 61311 7 DSAQESVITR Unmodified 1104.5411 0.54111633 2752 Q5R372 RABGAP1L Rab GTPase-activating protein 1-like yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 25.999 26.004 2 0.027403 28001 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 43.982 23.462 11268000 0 0 0 0 0 6700500 4568000 0 0 0 0 0 0 0 0 9003 2752 8196 76595;76596 61312 61312 1 DSAQNSVIIVDK Unmodified 1287.667 0.66704513 762 P02786 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.239 48.401 2 2.6951E-05 54327 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 95.483 75.342 154060000 0 0 0 7811800 10911000 10215000 11765000 14006000 9046900 14347000 11125000 21643000 14366000 9973700 18852000 9004 762 8197 76597;76598;76599;76600;76601;76602;76603;76604;76605;76606;76607;76608 61313;61314;61315;61316;61317;61318;61319;61320;61321;61322;61323 61314 11 DSAQTSVTQAQR Unmodified 1290.6164 0.61640654 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.443 14.605 2 3.4838E-20 13434 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 194.06 173.36 184330000 0 0 0 9634100 9083200 13988000 12080000 9719900 7883100 20577000 19409000 21110000 18894000 14469000 27484000 9005 2459 8198 76609;76610;76611;76612;76613;76614;76615;76616;76617;76618;76619;76620 61324;61325;61326;61327;61328;61329;61330;61331;61332;61333;61334;61335 61327 12 DSASELLGLDFGEK Unmodified 1479.7093 0.70930387 3981 Q96S38 RPS6KC1 Ribosomal protein S6 kinase delta-1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 89.711 85.658 2 0.00082236 106356 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.522 68.202 17957000 0 17957000 0 0 0 0 0 0 0 0 0 0 0 0 0 9006 3981 8199 76621;76622 61336 61336 1 DSATGLSK Unmodified 777.38685 0.38684752 1202 P26368 U2AF2 Splicing factor U2AF 65 kDa subunit yes yes 0 0 0 By MS/MS 1 0 1 1 106.68 111.94 2 0.023581 92663 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 82.241 22.631 67786000 67786000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9007 1202 8200 76623 61337 61337 1 DSATMSLDPEEEAEHPIK Unmodified 1997.8888 0.88880116 2150 Q08188 TGM3 Protein-glutamine gamma-glutamyltransferase E;Protein-glutamine gamma-glutamyltransferase E 50 kDa catalytic chain;Protein-glutamine gamma-glutamyltransferase E 27 kDa non-catalytic chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 62.805 62.893 3 3.2501E-09 72679 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 99.451 97.717 156340000 0 0 0 41724000 7826900 7104700 5756900 24179000 3756900 17456000 14419000 13424000 0 5874200 14815000 9008 2150 8201 76624;76625;76626;76627;76628;76629;76630;76631;76632;76633;76634 61338;61339;61340;61341;61342;61343;61344;61345;61346;61347;61348 61347 10 DSATMSLDPEEEAEHPIK Oxidation (M) 2013.8837 0.88371578 2150 Q08188 TGM3 Protein-glutamine gamma-glutamyltransferase E;Protein-glutamine gamma-glutamyltransferase E 50 kDa catalytic chain;Protein-glutamine gamma-glutamyltransferase E 27 kDa non-catalytic chain yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 2 1 1 1 1 1 53.631 53.469 2;3 6.5385E-06 60654 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 70.167 66.198 124660000 0 0 0 54322000 9366500 0 10962000 25957000 0 0 0 0 14551000 9506100 0 9009 2150 8201 76635;76636;76637;76638;76639;76640;76641 61349;61350;61351;61352;61353 61349 3454 4 DSAVAISGADSR Unmodified 1147.5469 0.54692999 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.127 28.321 2 0.00011669 30089 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 87.485 58.758 327440000 0 0 0 16667000 15990000 29692000 21528000 17971000 14891000 27697000 36631000 39961000 28310000 25307000 52800000 9010 3119 8202 76642;76643;76644;76645;76646;76647;76648;76649;76650;76651;76652;76653 61354;61355;61356;61357;61358;61359;61360;61361;61362;61363;61364;61365;61366 61359 13 DSAVNAICYGAK Unmodified 1267.5867 0.58668632 436 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 45.895 45.918 2 0.0050826 51779 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 66.435 46.131 15403000 0 0 0 0 3353100 0 0 0 0 0 0 0 5622900 6426500 0 9011 436 8203 76654;76655;76656;76657;76658 61367;61368;61369;61370;61371 61369 5 DSAWGTSDHSVSQPIMVQR Unmodified 2099.9695 0.96945151 2425 Q14671 PUM1 Pumilio homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 63.184 63.507 3 1.476E-05 71966 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.608 38.834 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9012 2425 8204 76659;76660;76661;76662 61372;61373;61374;61375 61372 4 DSAYPEELSR Unmodified 1165.5251 0.52513192 845 P07686 HEXB Beta-hexosaminidase subunit beta;Beta-hexosaminidase subunit beta chain B;Beta-hexosaminidase subunit beta chain A yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 40.119 40.199 2 0.0057424 45088 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 78.334 66.924 47697000 0 0 0 9088600 3089800 4724800 4287900 0 0 5543300 0 0 6097600 4053800 10811000 9013 845 8205 76663;76664;76665;76666;76667;76668;76669;76670 61376;61377;61378;61379;61380 61380 5 DSCEGLMVK Oxidation (M) 1053.4471 0.44708129 1081 P18858 LIG1 DNA ligase 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 6 4 2 2 1 1 1 1 27.729 25.287 2 0.02207 31570 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.525 56.749 27407000 4553500 12192000 0 0 0 5919000 0 0 0 4742500 0 0 0 0 0 9014 1081 8206 76671;76672;76673;76674 61381;61382 61382 2 DSCEGLMVK Unmodified 1037.4522 0.45216667 1081 P18858 LIG1 DNA ligase 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 40.341 34.495 2 0.0085108 45178 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.81 78.846 42631000 6205700 36426000 0 0 0 0 0 0 0 0 0 0 0 0 0 9015 1081 8206 76675;76676 61383 61383 0 DSCISPSEPETK Unmodified 1348.5817 0.58166052 3500 Q8TDB6 DTX3L E3 ubiquitin-protein ligase DTX3L yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 26.567 26.765 2 0.019997 28894 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 40.715 31.501 24267000 0 0 0 0 2312200 3118700 2323800 3108400 1620200 0 3637500 0 3236400 1672700 3237600 9016 3500 8207 76677;76678;76679;76680;76681;76682;76683;76684;76685 61384;61385 61384 2 DSDAGSSTPTTSTR Unmodified 1381.5957 0.59573068 1656 P51532 SMARCA4 Transcription activator BRG1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 10.195 10.332 2 4.8661E-19 8801 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 160.18 153.88 104990000 0 0 0 7123000 6901500 5618200 8624700 6745900 4224500 9343900 12363000 11834000 9991800 9999300 12223000 9017 1656 8208 76686;76687;76688;76689;76690;76691;76692;76693;76694;76695;76696;76697 61386;61387;61388;61389;61390;61391;61392;61393;61394;61395;61396 61394 11 DSDDVPMVLVGNK Unmodified 1387.6653 0.66533057 744 P01111;P01112 NRAS;HRAS GTPase NRas;GTPase HRas;GTPase HRas, N-terminally processed yes no 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 77.908 71.455 2 0.0024185 92347 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.264 62.634 50243000 14043000 36200000 0 0 0 0 0 0 0 0 0 0 0 0 0 9018 744 8209 76698;76699 61397;61398 61398 2 DSDDVPMVLVGNK Oxidation (M) 1403.6602 0.66024519 744 P01111;P01112 NRAS;HRAS GTPase NRas;GTPase HRas;GTPase HRas, N-terminally processed yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 6 4 2 2 1 1 1 1 66.836 58.541 2 2.8642E-07 75592 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.62 83.643 6750100 6750100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9019 744 8209 76700;76701;76702;76703 61399;61400;61401;61402;61403 61399 904 5 DSDEADLVLAK Unmodified 1174.5717 0.57174776 2249 Q13185 CBX3 Chromobox protein homolog 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.34 1 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58.952 58.312 2 1.6518E-07 62632 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 146.88 99.535 1013400000 76077000 123220000 5643300 47100000 42401000 58760000 39913000 45010000 40891000 63615000 96690000 81722000 64105000 83782000 144480000 9020 2249 8210 76704;76705;76706;76707;76708;76709;76710;76711;76712;76713;76714;76715;76716;76717;76718 61404;61405;61406;61407;61408;61409;61410;61411;61412;61413;61414;61415;61416;61417;61418;61419 61407 16 DSDGQVFGALASEPLK Unmodified 1632.7995 0.79951586 3340 Q8N573 OXR1 Oxidation resistance protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 84.051 80.054 2 8.0349E-31 99378 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 170.22 150.56 174000000 0 174000000 0 0 0 0 0 0 0 0 0 0 0 0 0 9021 3340 8211 76719;76720 61420;61421 61420 2 DSDGVDGFEAEGK Unmodified 1324.5419 0.54190419 3913 Q96KR1 ZFR Zinc finger RNA-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 39.638 39.976 2 0.00082763 43447 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.721 63.13 30483000 0 0 0 0 0 0 2780100 0 3334000 0 5153800 0 5784700 5237100 8193500 9022 3913 8212 76721;76722;76723;76724;76725;76726;76727 61422;61423;61424;61425;61426 61423 5 DSDIEQLR Unmodified 974.46689 0.46688876 455 O75116 ROCK2 Rho-associated protein kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 33.77 33.998 2 0.0068169 36965 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 95.541 62.026 63514000 0 0 0 0 4874700 0 6516900 0 0 10014000 11052000 0 8858100 9156000 13041000 9023 455 8213 76728;76729;76730;76731;76732;76733;76734 61427;61428;61429;61430;61431 61429 5 DSDIIDFR Unmodified 979.46108 0.4610751 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 65.251 65.35 2 0.017656 74690 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 65.313 37.826 64238000 0 0 0 3650800 4905400 0 3743800 8810500 3740100 5323700 5648900 8202500 5808400 5759400 8644400 9024 3023 8214 76735;76736;76737;76738;76739;76740;76741;76742;76743;76744;76745 61432;61433;61434;61435;61436;61437 61434 6 DSDLLHWK Unmodified 1012.4978 0.49779495 4945 Q9UJX4 ANAPC5 Anaphase-promoting complex subunit 5 yes yes 0 0 0 By MS/MS 10 0 1 1 60.223 60.415 2 0.031685 69115 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 54.774 31.464 3252100 0 0 0 0 0 0 0 0 0 0 0 0 3252100 0 0 9025 4945 8215 76746 61438 61438 1 DSDLSHVQNK Unmodified 1141.5364 0.53636531 407 O60506 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 6.96 3.8 7 2 14 2 5 2 2 1 1 1 1 1 1 2 1 1 2 12.271 11.078 2;3 1.9955E-148 13342 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 258.47 218.41 1400000000 50748000 1179900000 13166000 12640000 8886300 10575000 10119000 8008800 10169000 8933700 0 26177000 10165000 14780000 35747000 9026 407 8216 76747;76748;76749;76750;76751;76752;76753;76754;76755;76756;76757;76758;76759;76760;76761;76762;76763;76764;76765;76766;76767;76768;76769 61439;61440;61441;61442;61443;61444;61445;61446;61447;61448;61449;61450 61440 7 DSDPEFR Unmodified 864.36136 0.36136105 4666 Q9NVE7 PANK4 Pantothenate kinase 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 19.731 19.712 2 0.028147 20248 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 76.847 76.847 205910000 0 0 0 51739000 74446000 71127000 0 4520800 4078800 0 0 0 0 0 0 9027 4666 8217 76770;76771;76772;76773;76774 61451 61451 1 DSDPVMAGIGEEIAHFQK Oxidation (M) 1958.9044 0.90439164 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 1 0 By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 1 1 1 1 1 2 1 2 2 2 2 79.811 79.892 3 7.0232E-06 91936 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.737 65.635 149080000 0 0 0 3352900 3902600 6875600 3702000 8358900 6826700 19118000 6751500 29229000 14491000 13786000 32682000 9028 1364 8218 76775;76776;76777;76778;76779;76780;76781;76782;76783;76784;76785;76786;76787;76788;76789;76790;76791 61452;61453;61454;61455;61456;61457;61458;61459 61455 2113 7 DSDPVMAGIGEEIAHFQK Unmodified 1942.9095 0.90947702 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 91.911 85.398 3 0.00071287 110705 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.876 38.284 19569000 9734200 9834900 0 0 0 0 0 0 0 0 0 0 0 0 0 9029 1364 8218 76792;76793 61460 61460 1 DSDQLDVIQENR Unmodified 1430.6638 0.66375066 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.308 52.451 2 7.5258E-34 58417 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 202.56 172.3 126630000 0 0 0 9608700 5702200 8531200 7910200 7918000 4768800 12229000 11077000 16936000 9404800 13413000 19134000 9030 2775 8219 76794;76795;76796;76797;76798;76799;76800;76801;76802;76803;76804;76805 61461;61462;61463;61464;61465;61466;61467;61468;61469;61470;61471;61472;61473;61474 61466 14 DSDQVAQSDGEESPAAEEQLLGEHIK Unmodified 2781.2577 0.25769043 614 O94979 SEC31A Protein transport protein Sec31A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 5 3.56 1 1 1 1 1 1 75.796 72.023 3 1.4209E-66 87446 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 128.52 126.82 40172000 10698000 20013000 0 0 0 0 0 0 0 0 0 0 0 0 9461000 9031 614 8220 76806;76807;76808 61475;61476;61477;61478 61477 4 DSDSMETEEK Unmodified 1169.4394 0.43941296 4011 Q99460 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 9.4419 9.2328 2 8.9536E-06 11078 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 130.75 130.02 40811000 6399100 0 0 2456000 4284400 4250100 1239800 1454900 1027900 3844000 8338600 4807200 740430 0 1968900 9032 4011 8221 76809;76810;76811;76812;76813;76814;76815;76816;76817;76818;76819;76820 61479;61480;61481;61482;61483;61484;61485;61486 61482 8 DSDSMETEEK Oxidation (M) 1185.4343 0.43432758 4011 Q99460 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 1 0 By MS/MS 1 0 1 1 106.07 111.33 2 8.7832E-09 91945 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 157.91 155.39 72063000 72063000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9033 4011 8221 76821 61487 61487 5497 1 DSDVEVYNIIK Unmodified 1293.6452 0.64524705 1335 P34896 SHMT1 Serine hydroxymethyltransferase, cytosolic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 4.83 3.67 3 1 2 1 2 1 1 1 78.011 74.815 2 1.2389E-06 92995 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.35 101.5 693670000 27005000 659610000 2231600 0 2060400 0 0 0 0 0 0 0 0 2769500 0 9034 1335 8222 76822;76823;76824;76825;76826;76827 61488;61489;61490;61491 61488 4 DSDYYNMLLK Unmodified 1260.5696 0.56963927 1937 P63010 AP2B1 AP-2 complex subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 78.7 78.351 2 0.0025533 90609 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 82.452 59.024 246210000 0 185950000 0 3604600 2424600 4185000 2615200 4731800 0 5992100 3962300 4566700 3868500 6779300 17531000 9035 1937 8223 76828;76829;76830;76831;76832;76833;76834;76835;76836;76837;76838;76839;76840 61492;61493;61494;61495;61496;61497;61498;61499;61500;61501;61502;61503;61504 61499 13 DSDYYNMLLK Oxidation (M) 1276.5646 0.56455389 1937 P63010 AP2B1 AP-2 complex subunit beta yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.22 3.33 2 7 2 1 1 1 1 1 1 1 67.847 67.072 2 0.0058017 83476 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.279 76.62 61827000 0 42042000 0 1099100 2002800 3251600 1997000 3337200 0 3876900 4220800 0 0 0 0 9036 1937 8223 76841;76842;76843;76844;76845;76846;76847;76848;76849 61505;61506;61507;61508 61506 3114 4 DSEAELQR Unmodified 946.43559 0.43558863 2596 Q16181 SEPT7 Septin-7 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.451 14.613 2 0.0073144 13373 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 125.01 78.194 82073000 0 0 0 3247200 5647600 5310800 4660600 4593600 4224200 8621000 16697000 9651500 5325700 4513600 9579600 9037 2596 8224 76850;76851;76852;76853;76854;76855;76856;76857;76858;76859;76860;76861 61509;61510;61511 61509 2 DSEDIYNLK Unmodified 1095.5084 0.50841922 3796 Q96DG6 CMBL Carboxymethylenebutenolidase homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.46 3.82 1 3 9 2 2 1 1 1 1 1 1 1 1 1 57.578 56.325 2 4.1606E-06 61913 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 172.03 145.43 402930000 145730000 208780000 0 5033600 0 0 14691000 0 0 0 0 0 0 28704000 0 9038 3796 8225 76862;76863;76864;76865;76866;76867;76868;76869;76870;76871;76872;76873;76874 61512;61513;61514;61515;61516;61517;61518;61519;61520;61521;61522;61523;61524 61518 12 DSEDSGQHPDVNSSDK Unmodified 1715.6871 0.68706488 4807 Q9P260 KIAA1468 LisH domain and HEAT repeat-containing protein KIAA1468 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 9.9269 10.059 3 4.3875E-06 6622 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 78.932 74.689 42332000 0 0 0 2135900 1812300 4544900 3399200 2412900 2142400 3068400 6473800 5511800 2836400 3295100 4699300 9039 4807 8226 76875;76876;76877;76878;76879;76880;76881;76882;76883;76884;76885;76886 61525;61526;61527;61528;61529;61530 61529 6 DSEEEAASPEGK Unmodified 1247.5154 0.51535509 4499 Q9HB96 FANCE Fanconi anemia group E protein yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.05 11.164 2 0.0059881 9692 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 67.704 51.164 16357000 0 0 0 895290 828310 1364800 1316100 1589000 961150 1687500 0 2056500 1666300 1829800 2162700 9040 4499 8227 76887;76888;76889;76890;76891;76892;76893;76894;76895;76896;76897 61531;61532 61532 2 DSEEFGENEEENVHSK Unmodified 1877.7551 0.75514445 4697 Q9NWH9 SLTM SAFB-like transcription modulator yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 30.145 29.666 3 1.4966E-29 32455 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 113.4 113.4 209970000 0 35031000 0 11743000 11551000 11479000 12562000 10952000 12779000 12078000 12780000 20598000 21912000 13760000 22744000 9041 4697 8228 76898;76899;76900;76901;76902;76903;76904;76905;76906;76907;76908;76909;76910;76911 61533;61534;61535;61536;61537;61538;61539;61540;61541;61542;61543;61544;61545;61546;61547;61548 61536 15 DSEERASYILMEK Oxidation (M) 1585.7294 0.72938739 1547 P48637 GSS Glutathione synthetase yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2.33 0.471 2 1 1 1 1 52.101 46.477 3 0.002928 58468 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 74.769 65.574 35756000 10434000 7360900 17961000 0 0 0 0 0 0 0 0 0 0 0 0 9042 1547 8229 76912;76913;76914 61549;61550 61550 2455 0 DSEERASYILMEK Unmodified 1569.7345 0.73447277 1547 P48637 GSS Glutathione synthetase yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 62.428 56.396 3 0.014984 70341 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 56.482 42.802 29108000 16061000 0 13047000 0 0 0 0 0 0 0 0 0 0 0 0 9043 1547 8229 76915;76916 61551;61552 61552 0 DSEHIDDETRR Unmodified 1371.6015 0.60148476 1802 P58107 EPPK1 Epiplakin yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 8.9953 9.1293 3 0.0015551 6170 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 60.49 54.647 53811000 0 0 0 6631600 3934400 3585000 3436400 2172700 1661500 2404800 10608000 9153000 4024700 2389100 3810300 9044 1802 8230 76917;76918;76919;76920;76921;76922;76923;76924;76925;76926;76927;76928 61553;61554;61555;61556;61557 61554 5 DSEIELLTAGK Unmodified 1174.6081 0.60813326 4641 Q9NU22 MDN1 Midasin yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.983 72.052 2 0.0062184 83093 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 57.108 47.02 74319000 0 0 0 4515000 4195200 7394900 4206500 5157500 4233400 6519800 6048900 8695000 6272600 7064400 10016000 9045 4641 8231 76929;76930;76931;76932;76933;76934;76935;76936;76937;76938;76939;76940 61558;61559;61560;61561;61562;61563;61564 61560 7 DSEIRQIECDSEDMK Oxidation (M) 1869.7721 0.77205684 3839 Q96FV9 THOC1 THO complex subunit 1 yes yes 0 1 1 By matching By MS/MS By matching By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 41.726 41.66 3 0.0011102 46455 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 44.807 42.401 22550000 0 0 0 2096100 2787600 3127800 5843700 0 0 4337100 0 0 4357800 0 0 9046 3839 8232 76941;76942;76943;76944;76945;76946 61565 61565 5355 1 DSELGPGVK Unmodified 900.45526 0.45526144 664 O95466 FMNL1 Formin-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 25.173 25.25 2 0.032598 26821 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 67.981 35.51 37834000 0 0 0 7989300 0 0 10125000 8369700 0 0 0 0 0 11350000 0 9047 664 8233 76947;76948;76949;76950;76951 61566;61567 61566 2 DSENLASPSEYPENGER Unmodified 1892.8024 0.80242899 1707 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.871 44.019 2 3.2669E-46 48404 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 194.24 128.74 165390000 0 0 0 9029700 11419000 12509000 12512000 15502000 16431000 8849800 0 19856000 21076000 17147000 21057000 9048 1707 8234 76952;76953;76954;76955;76956;76957;76958;76959;76960;76961;76962;76963 61568;61569;61570;61571;61572;61573;61574;61575;61576;61577;61578;61579 61571 12 DSEPLGIEEAQIGK Unmodified 1484.7359 0.73585297 671 O95602 POLR1A DNA-directed RNA polymerase I subunit RPA1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 67.409 67.494 2 0.0038923 78058 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 52.247 40.2 59144000 0 0 0 4064000 3735900 0 4706500 3522200 0 7648000 6952000 9633100 7218400 4585700 7077900 9049 671 8235 76964;76965;76966;76967;76968;76969;76970;76971;76972;76973 61580;61581;61582;61583;61584;61585 61585 6 DSEQVAELK Unmodified 1017.4979 0.49785453 430 O60763 USO1 General vesicular transport factor p115 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.16 28.354 2 0.0014296 30023 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 142.04 106.69 349140000 0 0 0 15789000 16782000 31531000 25763000 22237000 19617000 37041000 44348000 37404000 27640000 22536000 48455000 9050 430 8236 76974;76975;76976;76977;76978;76979;76980;76981;76982;76983;76984;76985 61586;61587;61588;61589;61590;61591;61592;61593;61594;61595;61596;61597;61598 61596 13 DSEQVTVSLQNLGIHAGAYHANLEPEDK Unmodified 3034.4632 0.46320695 1496 P46063 RECQL ATP-dependent DNA helicase Q1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 85.919 80.036 4 7.363E-07 102538 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.404 43.773 79365000 79365000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9051 1496 8237 76986;76987 61599;61600;61601;61602 61601 4 DSESTPVDDRISLEQPPNGSDTPNPEK Unmodified 2923.3319 0.331918 4902 Q9UHI6 DDX20 Probable ATP-dependent RNA helicase DDX20 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.55 1 1 4 2 1 1 1 1 65.968 63.396 3 7.1329E-06 73653 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 48.115 35.313 39973000 0 30253000 0 0 0 0 0 0 0 4304400 0 0 5415100 0 0 9052 4902 8238 76988;76989;76990;76991;76992;76993 61603;61604;61605;61606;61607;61608;61609 61607 7 DSETGENIR Unmodified 1019.452 0.45196697 1399 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 11.658 11.808 2 0.0037062 9545 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 101.6 94.381 126370000 0 0 0 6235200 5565000 7800300 7671700 9531100 6316400 8990800 11989000 14119000 9034000 12698000 26424000 9053 1399 8239 76994;76995;76996;76997;76998;76999;77000;77001;77002;77003;77004;77005 61610;61611;61612;61613;61614;61615;61616;61617;61618 61615 7 DSETGENIRQAASSLQQASLK Unmodified 2232.0982 0.09821708 1399 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 75.163 70.239 3 7.8422E-59 88751 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 135.21 123.09 145940000 21966000 100310000 23667000 0 0 0 0 0 0 0 0 0 0 0 0 9054 1399 8240 77006;77007;77008;77009 61619;61620;61621;61622;61623;61624 61619 6 DSETGLLIK Unmodified 974.52843 0.52842638 4641 Q9NU22 MDN1 Midasin yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 53.03 53.363 2 0.043067 60454 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 43.769 16.807 68631000 0 0 0 0 0 8926200 15396000 0 0 12152000 0 16669000 0 0 15488000 9055 4641 8241 77010;77011;77012;77013;77014 61625;61626;61627 61626 3 DSETSFVPTNMAVNYVQHNR Oxidation (M) 2324.0492 0.049158397 4761 Q9NZ63 C9orf78 Uncharacterized protein C9orf78 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 69.918 69.947 3 0.00021964 80365 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 44.577 41.48 34582000 0 0 0 3521000 0 0 0 5871400 0 0 12013000 0 5369200 7807700 0 9056 4761 8242 77015;77016;77017;77018;77019 61628;61629 61628 6134 2 DSETSFVPTNMAVNYVQHNR Unmodified 2308.0542 0.054243775 4761 Q9NZ63 C9orf78 Uncharacterized protein C9orf78 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 78.917 79.087 3 0.0079128 91556 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 29.766 21.869 39191000 0 0 0 0 0 0 0 2194400 0 5098700 6159700 7483600 0 3576700 14678000 9057 4761 8242 77020;77021;77022;77023;77024;77025 61630;61631 61631 2 DSFDDRGPSLNPVLDYDHGSR Unmodified 2361.0622 0.062165924 1473 P43243 MATR3 Matrin-3 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.69 1.54 1 25 1 1 3 3 2 2 2 3 3 3 3 73.546 73.374 3;4 2.5474E-06 84036 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.225 59.937 631000000 16144000 0 0 9382800 0 63172000 0 45552000 34855000 32500000 36827000 81794000 49478000 53497000 207800000 9058 1473 8243 77026;77027;77028;77029;77030;77031;77032;77033;77034;77035;77036;77037;77038;77039;77040;77041;77042;77043;77044;77045;77046;77047;77048;77049;77050;77051 61632;61633;61634;61635;61636;61637;61638;61639;61640;61641;61642;61643;61644;61645;61646;61647;61648;61649;61650 61637 13 DSFGSSQASVASSQPVSSEMYRDPFGNPFA Oxidation (M) 3167.3778 0.37782234 2021 P98082 DAB2 Disabled homolog 2 yes yes 0 1 1 By MS/MS 2.5 0.5 1 1 2 89.788 85.734 3 6.6144E-20 106354 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.416 74.567 82302000 0 82302000 0 0 0 0 0 0 0 0 0 0 0 0 0 9059 2021 8244 77052;77053 61651 61651 3276 1 DSFHHNVAALR Unmodified 1265.6265 0.62651772 4114 Q9BRQ8 AIFM2 Apoptosis-inducing factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 29.751 30.053 3 0.00022313 32777 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 81.017 59.447 169840000 0 0 0 0 0 12466000 9124000 14875000 6826500 22184000 21545000 28449000 9365200 15057000 29949000 9060 4114 8245 77054;77055;77056;77057;77058;77059;77060;77061;77062;77063;77064 61652;61653;61654;61655;61656;61657;61658;61659;61660 61657 7 DSFIGENSR Unmodified 1023.4621 0.46213773 4043;116 Q99661;O00139 KIF2C;KIF2A Kinesin-like protein KIF2C;Kinesin-like protein KIF2A no no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 31.248 31.487 2 0.008436 34224 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 69.628 48.328 162950000 0 0 0 0 11448000 14148000 15390000 10023000 9016600 13079000 18334000 16576000 12891000 17706000 24338000 9061 4043;116 8246 77065;77066;77067;77068;77069;77070;77071;77072;77073;77074;77075 61661;61662;61663;61664;61665 61661 5 DSFTAVVITGVQPEHIQYLK Unmodified 2244.179 0.17903358 28 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 91.741 83.611 3 1.3395E-08 108482 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.586 68.365 8938500 8938500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9062 28 8247 77076 61666 61666 1 DSGDENEPIQER Unmodified 1387.5852 0.58516599 3581 Q8WX93 PALLD Palladin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 20.973 21.169 2 6.0755E-20 20754 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 161.17 142.2 28345000 0 0 0 2697900 2983800 0 0 0 3481300 3899900 5242400 5028300 0 5011000 0 9063 3581 8248 77077;77078;77079;77080;77081;77082;77083 61667;61668;61669;61670;61671;61672 61670 6 DSGDVAALRGSRK Unmodified 1330.6953 0.69532556 1419 P40763 STAT3 Signal transducer and activator of transcription 3 yes yes 0 0 2 By MS/MS 2 0 1 1 22.613 17.717 3 0.032829 25294 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 59.116 35.045 47856000 47856000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9064 1419 8249 77084 61673 61673 1 DSGEEAAEPSAPSR Unmodified 1401.6008 0.60081606 2042 Q00653 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.633 20.843 2 2.8493E-85 21169 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 192.5 174.23 131240000 0 0 0 7672900 8487500 14167000 7941000 6599500 0 11382000 16590000 20009000 14341000 12267000 11780000 9065 2042 8250 77085;77086;77087;77088;77089;77090;77091;77092;77093;77094;77095;77096 61674;61675;61676;61677;61678;61679;61680;61681;61682;61683;61684;61685 61679 12 DSGFQMNQLR Unmodified 1194.5452 0.54515585 763 P02787 TF Serotransferrin yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 54.643 54.53 2 0.018136 61805 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 48.561 16.627 33341000 0 0 0 10965000 0 0 0 18489000 0 3886000 0 0 0 0 0 9066 763 8251 77097;77098;77099 61686 61686 1 DSGFTIVSPLDI Unmodified 1262.6394 0.63943339 3636 Q92609 TBC1D5 TBC1 domain family member 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 97.658 97.79 2 0.0009293 113550 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.485 60.891 11222000 0 0 0 0 0 1138000 641590 934420 682960 2240000 1112100 0 662550 1213300 2596500 9067 3636 8252 77100;77101;77102;77103;77104;77105;77106;77107;77108 61687;61688 61688 2 DSGGAAVAEQVLSIMEIILDESNAEPLSEDK Unmodified 3229.5548 0.55478365 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 2 2 2 2 106.98 101.92 3 8.2389E-215 126911 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 201.66 197.89 69627000 58116000 11511000 0 0 0 0 0 0 0 0 0 0 0 0 0 9068 2775 8253 77109;77110;77111;77112 61689;61690;61691;61692;61693 61692 5 DSGHAGARDIVSIQELIEVEEEEEILLNSYTTPSK Unmodified 3870.9011 0.90108699 2385 Q14181 POLA2 DNA polymerase alpha subunit B yes yes 0 0 1 By MS/MS 2 0 3 3 99.221 91.091 4;5 3.3474E-53 117109 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.289 93.442 140840000 140840000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9069 2385 8254 77113;77114;77115 61694;61695;61696 61695 3 DSGITYLGIK Unmodified 1065.5706 0.57062555 1653 P51452 DUSP3 Dual specificity protein phosphatase 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.53 2.94 1 2 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 71.056 70.237 2 0.00075957 87470 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.89 79.014 560410000 531090 303950000 0 13623000 16179000 24338000 23054000 20258000 14106000 23822000 20749000 24255000 22142000 18058000 35345000 9070 1653 8255 77116;77117;77118;77119;77120;77121;77122;77123;77124;77125;77126;77127;77128;77129;77130 61697;61698;61699;61700;61701;61702;61703;61704;61705;61706;61707;61708;61709;61710;61711 61700 15 DSGNIPEAIASYR Unmodified 1391.6681 0.66810776 271 O15294 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.206 70.281 2 6.622E-08 81426 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 122.69 102.39 310080000 0 0 0 12989000 15025000 23469000 20483000 24604000 21581000 24541000 29255000 39492000 26875000 23189000 48573000 9071 271 8256 77131;77132;77133;77134;77135;77136;77137;77138;77139;77140;77141;77142 61712;61713;61714;61715;61716;61717;61718;61719;61720;61721;61722;61723;61724;61725 61725 14 DSGNIPEAIASYRTALK Unmodified 1804.9319 0.93192702 271 O15294 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 0 0 1 By MS/MS 2 0 1 1 83.659 75.528 3 0.0067987 98747 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.059 23.226 11861000 11861000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9072 271 8257 77143 61726 61726 1 DSGNKPPGLLPR Unmodified 1249.6779 0.67788459 5112 Q9Y2Q3 GSTK1 Glutathione S-transferase kappa 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 41.965 42.09 3 0.0040849 47773 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 59.418 48.492 326690000 0 0 0 21355000 29900000 26465000 32058000 23126000 24096000 32082000 33291000 42820000 32510000 28989000 0 9073 5112 8258 77144;77145;77146;77147;77148;77149;77150;77151;77152;77153;77154 61727;61728;61729 61729 0 DSGNWDTSGSELSEGELEK Unmodified 2038.8603 0.8603378 494 O75400 PRPF40A Pre-mRNA-processing factor 40 homolog A yes yes 0 0 0 By MS/MS By MS/MS By matching By matching 10 0 4 1 1 1 1 64.69 64.956 2 0.0027204 74443 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 48.14 48.14 14260000 0 0 0 0 0 0 0 2193300 0 4961300 0 0 0 3698200 3407800 9074 494 8259 77155;77156;77157;77158 61730 61730 1 DSGPETLEK Unmodified 974.45566 0.45565537 3374 Q8N9B5 JMY Junction-mediating and -regulatory protein yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 19.937 20.177 2 0.020738 21051 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 52.867 30.907 32005000 0 0 0 0 2879700 3292900 2554300 0 2248800 3354600 2961500 3585900 2539100 3089000 5498800 9075 3374 8260 77159;77160;77161;77162;77163;77164;77165;77166;77167;77168 61731;61732 61731 2 DSGPLFNTDYDILK Unmodified 1596.7672 0.7671531 2489 Q15054 POLD3 DNA polymerase delta subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 87.556 86.39 2 1.8095E-13 104228 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 138.71 120.85 507190000 29793000 398760000 3807000 0 3825600 7156400 4632100 6040600 7165800 8747200 6653600 6276300 3661900 4624500 16044000 9076 2489 8261 77169;77170;77171;77172;77173;77174;77175;77176;77177;77178;77179;77180;77181;77182;77183 61733;61734;61735;61736;61737;61738;61739;61740;61741;61742;61743;61744;61745;61746;61747;61748;61749 61744 16 DSGPPPSTVSEAEFEDIMK Oxidation (M) 2050.9041 0.90411687 3357 Q8N684 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.204 73.269 2 4.164E-42 84122 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 123.02 121.04 253440000 0 0 0 13769000 18168000 20311000 21327000 12071000 25253000 19361000 24889000 33051000 20500000 21939000 22801000 9077 3357 8262 77184;77185;77186;77187;77188;77189;77190;77191;77192;77193;77194;77195 61750;61751;61752;61753;61754;61755;61756;61757;61758;61759;61760;61761;61762;61763 61756 4931 14 DSGPPPSTVSEAEFEDIMK Unmodified 2034.9092 0.90920225 3357 Q8N684 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 1 2 2 2 1 2 2 2 2 2 2 83.667 83.76 2;3 5.5716E-271 96861 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 240.43 234.95 415210000 0 0 0 6531700 15196000 19566000 21315000 35811000 19048000 43799000 49534000 42224000 22312000 40825000 99044000 9078 3357 8262 77196;77197;77198;77199;77200;77201;77202;77203;77204;77205;77206;77207;77208;77209;77210;77211;77212;77213;77214;77215;77216 61764;61765;61766;61767;61768;61769;61770;61771;61772;61773;61774;61775;61776;61777;61778;61779;61780;61781;61782;61783;61784 61770 19 DSGQWHYFDDNSVSPVNENQIESK Unmodified 2794.2107 0.21068066 1670 P51784 USP11 Ubiquitin carboxyl-terminal hydrolase 11 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 78.626 74.549 3 0.0028086 92769 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 19.306 18.781 17431000 0 17431000 0 0 0 0 0 0 0 0 0 0 0 0 0 9079 1670 8263 77217;77218 61785 61785 1 DSGRGDSVSDSGSDALR Unmodified 1679.7347 0.73468378 2696 Q53EL6 PDCD4 Programmed cell death protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.656 22.862 3 8.0621E-08 24183 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 93.226 78.435 423870000 0 0 0 18695000 17649000 39106000 23393000 22575000 16447000 37891000 44044000 55365000 43361000 46177000 59173000 9080 2696 8264 77219;77220;77221;77222;77223;77224;77225;77226;77227;77228;77229;77230 61786;61787;61788;61789;61790;61791;61792;61793;61794;61795;61796;61797 61786 11 DSGRPPGDSSGQAVAPSEGANK Unmodified 2082.9566 0.95663822 2186 Q12774 ARHGEF5 Rho guanine nucleotide exchange factor 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 22.576 22.848 3 0.00081991 23422 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.918 31.1 21923000 0 0 0 0 0 2772700 2917700 0 0 3967600 3843300 0 0 3231500 5190200 9081 2186 8265 77231;77232;77233;77234;77235;77236 61798;61799;61800 61800 3 DSGSAAEAPR Unmodified 959.43084 0.4308376 621 O95104 SCAF4 Splicing factor, arginine/serine-rich 15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching 9 2.83 1 8 1 1 1 1 1 1 1 1 1 18.312 18.989 2 0.010237 92179 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 74.92 65.332 43835000 21777000 0 0 0 2450300 2257500 3574000 3234200 3768400 2179900 0 0 2860000 1733900 0 9082 621 8266 77237;77238;77239;77240;77241;77242;77243;77244;77245 61801;61802 61802 2 DSGSDLSHRPK Unmodified 1197.5738 0.57381344 635 O95251 KAT7 Histone acetyltransferase KAT7 yes yes 0 0 1 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8 3.46 3 9 1 2 1 1 1 1 1 1 1 1 1 7.1072 6.5537 2;3 1.3244E-05 7215 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 107.21 97.617 95696000 6248100 0 25119000 5258100 0 0 400370 6096600 4594400 12994000 14966000 11574000 0 2139300 6306100 9083 635 8267 77246;77247;77248;77249;77250;77251;77252;77253;77254;77255;77256;77257 61803;61804;61805;61806;61807;61808 61806 2 DSGSISLQETR Unmodified 1191.5731 0.57314474 4365 Q9H2G2 SLK STE20-like serine/threonine-protein kinase yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 35.559 35.773 2 0.0151 38327 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.054 67.514 61720000 0 0 0 4914600 0 7998200 5317200 4940900 5550200 0 0 10229000 10831000 0 11939000 9084 4365 8268 77258;77259;77260;77261;77262;77263;77264;77265 61809;61810;61811 61809 1 DSGSQEVLSELR Unmodified 1318.6365 0.63647328 4189 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A yes yes 0 0 0 By matching By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 64.788 64.988 2 0.0062127 74520 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 51.762 30.79 26793000 0 0 0 0 0 0 7137800 4960600 0 0 8591700 0 6102500 0 0 9085 4189 8269 77266;77267;77268;77269 61812 61812 1 DSGSQVEEDTSCSDSK Unmodified 1729.6585 0.65846687 2159 Q08499 PDE4D cAMP-specific 3',5'-cyclic phosphodiesterase 4D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.31 2.4 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 21.291 21.846 2 1.2517E-35 13253 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 188.29 188.29 92309000 6188500 0 0 4066400 6057500 4470800 3632200 4275600 3156500 7367400 7820600 7817400 12190000 9714900 15551000 9086 2159 8270 77270;77271;77272;77273;77274;77275;77276;77277;77278;77279;77280;77281;77282 61813;61814;61815;61816;61817;61818;61819;61820;61821;61822;61823;61824;61825 61816 13 DSGSSSPLPK Unmodified 973.47164 0.47163978 3171 Q86VQ1 GLCCI1 Glucocorticoid-induced transcript 1 protein yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 21.627 21.701 2 0.041102 22524 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 54.722 18.153 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9087 3171 8271 77283;77284 61826;61827 61826 2 DSGSSSVSSTSSSSSSSPGDK Unmodified 1918.7876 0.78756679 4437 Q9H7S9 ZNF703 Zinc finger protein 703 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 9.1293 9.2429 2 3.4367E-07 7634 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 65.092 63.188 18411000 0 0 0 1509600 1161400 1255700 1651200 1397700 1089200 941160 0 3212400 1802900 1613000 2777000 9088 4437 8272 77285;77286;77287;77288;77289;77290;77291;77292;77293;77294;77295 61828;61829;61830;61831 61831 4 DSGTLQSQEAK Unmodified 1162.5466 0.54659564 2840;5195 Q641Q2;Q9Y4E1 FAM21A;FAM21C WASH complex subunit FAM21A;WASH complex subunit FAM21C no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 10.611 10.752 2 0.0006603 8835 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.113 52.975 29885000 0 0 0 1549300 2094100 2531200 2717300 1895700 1596500 3160800 2380400 2796100 2223700 2771500 4168300 9089 2840;5195 8273 77296;77297;77298;77299;77300;77301;77302;77303;77304;77305;77306;77307 61832;61833;61834;61835;61836;61837;61838;61839;61840;61841 61835 10 DSGVASTEDSSSSHITAAAIAAK Unmodified 2175.0291 0.029134462 4579 Q9NQX3 GPHN Gephyrin;Molybdopterin adenylyltransferase;Molybdopterin molybdenumtransferase yes yes 0 0 0 By MS/MS 3 0 1 1 55.636 50.769 3 0.00037961 62688 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 52.451 49.398 11317000 0 11317000 0 0 0 0 0 0 0 0 0 0 0 0 0 9090 4579 8274 77308 61842 61842 1 DSGVPGLEADTTGIQVK Unmodified 1685.8472 0.84719434 3321 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 73.931 74.047 2 0.0002563 85332 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 85.554 76.366 60357000 0 0 0 0 3588300 8470800 4995900 4656600 3222200 5553100 5511800 6569500 5694700 5256300 6838300 9091 3321 8275 77309;77310;77311;77312;77313;77314;77315;77316;77317;77318;77319 61843;61844;61845;61846;61847;61848;61849;61850;61851;61852;61853;61854 61843 12 DSGYLHLLYK Unmodified 1207.6237 0.62372375 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 74.796 74.897 3 0.017787 85756 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.318 37.429 39768000 0 0 0 1425900 0 3089200 1566100 4273100 5261400 2327500 2327000 5245600 3719700 3348200 7184800 9092 1364 8276 77320;77321;77322;77323;77324;77325;77326;77327;77328;77329;77330 61855 61855 1 DSHGVAQVR Unmodified 967.48354 0.48354187 1887 P62277 RPS13 40S ribosomal protein S13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 9.2927 9.4267 2 0.0030243 7784 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 126.62 103.19 167870000 0 0 0 11107000 10583000 6725500 11450000 11248000 5818600 10948000 28316000 25315000 18306000 9387000 18666000 9093 1887 8277 77331;77332;77333;77334;77335;77336;77337;77338;77339;77340;77341;77342 61856;61857;61858;61859;61860;61861;61862;61863;61864;61865;61866 61865 9 DSHLIPTPQAPSIAFPLANPPVAPHPR Unmodified 2839.5133 0.51333244 3621 Q92547 TOPBP1 DNA topoisomerase 2-binding protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 88.899 89.043 4 0.0028518 102956 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 23.917 20.648 2688500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2688500 9094 3621 8278 77343 61867 61867 1 DSHPPDLGPPHIPVPPSIPVGGCNPPSSEETPK Unmodified 3407.6456 0.64560476 2486 Q15047 SETDB1 Histone-lysine N-methyltransferase SETDB1 yes yes 0 0 0 By MS/MS 2 0 1 1 85.647 83.215 4 0.01152 100515 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 20.312 14.769 3360000 0 0 3360000 0 0 0 0 0 0 0 0 0 0 0 0 9095 2486 8279 77344 61868 61868 1 DSHPSEEPVK Unmodified 1123.5146 0.51456723 2769 Q5T1V6 DDX59 Probable ATP-dependent RNA helicase DDX59 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.42 1.93 1 11 1 1 1 1 1 1 1 1 1 1 1 1 9.1386 8.9777 2 0.0040858 6639 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.127 57.925 25059000 0 3800600 0 1087500 1446800 1838500 2274300 0 1186600 801990 2811100 3860100 1724300 1392500 2834800 9096 2769 8280 77345;77346;77347;77348;77349;77350;77351;77352;77353;77354;77355;77356 61869;61870;61871;61872;61873;61874;61875;61876;61877 61870 9 DSHTDEPGIK Unmodified 1097.4989 0.49891717 4146 Q9BTF0 THUMPD2 THUMP domain-containing protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 14.498 11.183 2 0.040661 14985 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 61.679 36.756 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9097 4146 8281 77357 61878 61878 1 DSIHGHSQLDK Unmodified 1235.5895 0.58946351 2063 Q01804 OTUD4 OTU domain-containing protein 4 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 8.3621 8.4917 3 0.033653 6914 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 32.263 22.419 91380000 0 0 0 6990000 5460600 3838700 5837000 3295200 5479700 7178000 20263000 10633000 8268100 5964900 8171600 9098 2063 8282 77358;77359;77360;77361;77362;77363;77364;77365;77366;77367;77368;77369 61879 61879 1 DSIINDFK Unmodified 950.47091 0.4709115 3041 Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 0 0 0 By MS/MS 10 0 1 1 63.295 63.43 2 0.036499 72416 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 51.854 27.036 11721000 0 0 0 0 0 0 0 0 0 11721000 0 0 0 0 0 9099 3041 8283 77370 61880 61880 1 DSIKLDDDSERK Unmodified 1419.6842 0.68415175 3170 Q86VP6 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 2 By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 19.649 19.875 3 0.044405 20017 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.659 38.11 43441000 0 0 0 3859000 2514500 0 4701400 0 0 5482300 7057000 8168500 6397900 0 5260600 9100 3170 8284 77371;77372;77373;77374;77375;77376;77377;77378 61881 61881 0 DSILSEMK Unmodified 921.44773 0.44773322 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 56.816 56.804 2 0.033366 64651 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 53.754 24.856 62294000 0 0 0 6687200 5691300 11789000 4450500 0 4951800 9545200 10916000 0 8263400 0 0 9101 5071 8285 77379;77380;77381;77382;77383;77384;77385;77386 61882;61883 61882 2 DSILSIVHVK Unmodified 1109.6445 0.64445919 391 O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes yes 0 0 0 By MS/MS 2 0 1 1 84.477 76.346 2 0.0072196 99679 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.787 59.091 28687000 28687000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9102 391 8286 77387 61884 61884 1 DSILSNAGSSPNGFSEK Unmodified 1708.7904 0.79040774 5186 Q9Y485 DMXL1 DmX-like protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 62.575 56.682 2 0.00057609 72796 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.069 67.378 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9103 5186 8287 77388 61885 61885 1 DSINFLDHINGK Unmodified 1371.6783 0.67827852 3936 Q96NC0 ZMAT2 Zinc finger matrin-type protein 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 77.924 74.175 3 0.0033902 92911 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.694 52.368 80680000 0 67107000 13573000 0 0 0 0 0 0 0 0 0 0 0 0 9104 3936 8288 77389;77390 61886;61887 61886 2 DSIPLPVIK Unmodified 980.59063 0.59063271 3187 Q86X10 RALGAPB Ral GTPase-activating protein subunit beta yes yes 0 0 0 By MS/MS 2 0 1 1 83.69 78.97 2 0.008734 98184 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.296 15.679 42646000 0 42646000 0 0 0 0 0 0 0 0 0 0 0 0 0 9105 3187 8289 77391 61888 61888 1 DSIPVTELSASGPFESHDLLRK Unmodified 2397.2176 0.21760393 5080 Q9Y244 POMP Proteasome maturation protein yes yes 0 0 1 By MS/MS By MS/MS 6 4 1 1 1 1 83.849 79.891 4 2.0924E-06 102558 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.295 60.4 26410000 16455000 0 0 0 0 0 0 0 0 0 0 0 0 0 9955000 9106 5080 8290 77392;77393 61889;61890 61890 2 DSIQSHQESLSVLR Unmodified 1597.806 0.80599822 4669 Q9NVI1 FANCI Fanconi anemia group I protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 53.939 54.133 2;3 0.0041287 60294 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.817 53.133 140000000 0 0 0 13335000 0 13202000 15660000 19319000 12904000 0 17568000 26825000 0 0 21183000 9107 4669 8291 77394;77395;77396;77397;77398;77399;77400;77401;77402 61891;61892;61893;61894 61893 3 DSITVFVSNLPYSMQEPDTK Unmodified 2270.0777 0.077664559 2475 Q15020 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes yes 0 0 0 By MS/MS 2 0 1 1 96.599 91.778 3 0.0093676 113777 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 36.856 33.136 10558000 0 10558000 0 0 0 0 0 0 0 0 0 0 0 0 0 9108 2475 8292 77403 61895 61895 0 DSIVAELDREMSR Unmodified 1519.7301 0.73005609 190 O14579 COPE Coatomer subunit epsilon yes yes 0 0 1 By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 82.5 82.643 3 0.00045424 95236 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.528 45.317 54665000 0 0 0 0 0 1553400 0 1560200 1452900 2350400 2917700 2953300 0 4285500 37592000 9109 190 8293 77404;77405;77406;77407;77408;77409;77410;77411 61896 61896 1 DSIVHQAGMLK Unmodified 1197.6176 0.61759251 257 O15144 ARPC2 Actin-related protein 2/3 complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 4 18 2 2 2 1 1 1 1 1 2 2 1 2 2 2 46.848 45.745 2;3 2.1E-16 62967 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 192.26 156.82 1181700000 446880000 561880000 0 14718000 4123800 8365800 4489100 6376700 5686500 12033000 24971000 15557000 10049000 16022000 50546000 9110 257 8294 77412;77413;77414;77415;77416;77417;77418;77419;77420;77421;77422;77423;77424;77425;77426;77427;77428;77429;77430;77431;77432;77433 61897;61898;61899;61900;61901;61902;61903;61904;61905;61906 61903 8 DSIVHQAGMLK Oxidation (M) 1213.6125 0.61250714 257 O15144 ARPC2 Actin-related protein 2/3 complex subunit 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 1 3 2 39.095 34.376 2;3 3.4494E-10 43651 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 150.35 129.83 467540000 55723000 273290000 138530000 0 0 0 0 0 0 0 0 0 0 0 0 9111 257 8294 77434;77435;77436;77437;77438;77439 61907;61908;61909;61910;61911;61912;61913;61914;61915 61914 341 7 DSIVQGFQWGTR Unmodified 1392.6786 0.67861287 2481 Q15029 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.432 79.491 2 6.4487E-08 91930 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 136.33 109.94 209090000 0 0 0 11416000 9600700 17625000 9053200 17004000 13367000 18952000 16429000 25456000 16793000 19502000 33891000 9112 2481 8295 77440;77441;77442;77443;77444;77445;77446;77447;77448;77449;77450;77451 61916;61917;61918;61919;61920;61921;61922;61923;61924 61917 5 DSKPPGNLK Unmodified 954.51345 0.51344502 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 1 By MS/MS By MS/MS 2.67 0.471 1 2 1 2 13.127 9.5531 2 0.044231 11955 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 95.741 56.95 276790000 232780 276550000 0 0 0 0 0 0 0 0 0 0 0 0 0 9113 1986 8296 77452;77453;77454 61925 61925 0 DSKPSSTPRSK Unmodified 1188.6099 0.6098646 830 P06748 NPM1 Nucleophosmin yes yes 0 0 2 By MS/MS 2 0 1 1 0.92634 -2.3612 3 0.0072287 816 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.479 61.362 65805000 65805000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9114 830 8297 77455 61926 61926 0 DSLAEVEEK Unmodified 1018.4819 0.48187012 2661 Q32MZ4 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 33.554 30.127 2 0.0075334 40580 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.431 39.471 138840000 17378000 85723000 0 0 0 0 0 0 0 0 0 0 0 0 35743000 9115 2661 8298 77456;77457;77458;77459;77460;77461 61927;61928;61929;61930;61931;61932 61931 6 DSLASNIVNLTPQNQPHPTATK Unmodified 2345.1975 0.19753719 2778 Q5T5Y3 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 yes yes 0 0 0 By MS/MS 3 0 1 1 77.167 73.689 3 0.0062299 88604 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 28.813 20.727 2989400 0 2989400 0 0 0 0 0 0 0 0 0 0 0 0 0 9116 2778 8299 77462 61933 61933 1 DSLAWLSLVK Unmodified 1130.6336 0.63356015 5134 Q9Y315 DERA Deoxyribose-phosphate aldolase yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 92.777 92.875 2 0.0087229 107670 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.35 42.81 4627300 0 0 0 0 0 688040 0 0 0 849080 0 0 0 797250 2292900 9117 5134 8300 77463;77464;77465;77466 61934 61934 1 DSLAWLSLVKEELGDEWLK Unmodified 2230.1522 0.15215013 5134 Q9Y315 DERA Deoxyribose-phosphate aldolase yes yes 0 0 1 By matching By MS/MS By matching By matching By MS/MS By matching 10 0 6 1 1 1 1 1 1 47.216 47.497 3 0.046994 52801 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 22.435 4.1837 29418000 0 0 0 0 0 0 2646100 4235400 0 5275800 0 0 4660300 4602500 7997500 9118 5134 8301 77467;77468;77469;77470;77471;77472 61935 61935 1 DSLDIEVK Unmodified 917.47058 0.47057715 4074;4075 Q99961;Q99962 SH3GL1;SH3GL2 Endophilin-A2;Endophilin-A1 no no 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 49.913 50.351 2 0.0093078 55809 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.313 7.6212 54177000 0 0 0 0 0 0 0 9901500 0 0 0 0 0 0 44276000 9119 4074;4075 8302 77473;77474;77475 61936;61937;61938 61936 3 DSLDPSFTHAMQLLTAEIEK Oxidation (M) 2261.0886 0.088563596 2138 Q07666 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 yes yes 0 1 0 By MS/MS By MS/MS 2.29 0.452 5 2 5 2 93.851 90.135 3 2.7117E-09 113888 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.737 82.814 170080000 0 163520000 6562900 0 0 0 0 0 0 0 0 0 0 0 0 9120 2138 8303 77476;77477;77478;77479;77480;77481;77482 61939;61940;61941;61942;61943;61944;61945 61942 3440 7 DSLDPSFTHAMQLLTAEIEK Unmodified 2245.0936 0.093648974 2138 Q07666 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 100.52 96.247 2;3 8.0311E-82 119055 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 170.49 146.81 335880000 0 335880000 0 0 0 0 0 0 0 0 0 0 0 0 0 9121 2138 8303 77483;77484;77485 61946;61947;61948;61949 61948 4 DSLDQFDCK Unmodified 1126.4601 0.46008882 4491 Q9HAV4 XPO5 Exportin-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41.461 40.862 2 0.0034127 44746 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 104.44 91.389 255230000 408150 128600000 0 5886200 6551800 19602000 8398800 7926200 6232800 11768000 8250400 14555000 10472000 11181000 15405000 9122 4491 8304 77486;77487;77488;77489;77490;77491;77492;77493;77494;77495;77496;77497;77498;77499 61950;61951;61952;61953;61954;61955;61956;61957;61958;61959;61960;61961;61962 61957 13 DSLENTLTESEAR Unmodified 1463.674 0.673981 87 CON__Q15323;CON__Q9UE12;Q15323 KRT31 Keratin, type I cuticular Ha1 no no 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 56.027 55.851 2 0.019244 63295 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 38.021 28.225 + 10583000 0 0 0 0 2988600 0 0 7594000 0 0 0 0 0 0 0 9123 87 8305 77500;77501 61963 61963 1 DSLFDLDGPK Unmodified 1105.5292 0.52915466 4164 Q9BUL5 PHF23 PHD finger protein 23 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.56 3.47 1 2 6 1 2 1 1 1 1 1 1 77.671 76.397 2 0.017068 90816 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 66.692 57.298 130260000 415100 107420000 0 2581100 0 0 0 0 0 0 3660900 5160400 2573100 1856100 6594000 9124 4164 8306 77502;77503;77504;77505;77506;77507;77508;77509;77510 61964;61965;61966 61965 3 DSLGAHSITSPGGNNVQLIDK Unmodified 2122.0655 0.065460388 3609 Q92503 SEC14L1 SEC14-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.42 2 1 1 24 1 1 2 2 2 2 2 2 2 2 2 2 2 2 66.013 65.772 2;3 1.2155E-61 75940 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 131.54 122.49 1024000000 0 12243000 2125000 43346000 60231000 78810000 70857000 93412000 58592000 90928000 94940000 144900000 81610000 78442000 113550000 9125 3609 8307 77511;77512;77513;77514;77515;77516;77517;77518;77519;77520;77521;77522;77523;77524;77525;77526;77527;77528;77529;77530;77531;77532;77533;77534;77535;77536 61967;61968;61969;61970;61971;61972;61973;61974;61975;61976;61977;61978;61979;61980;61981;61982;61983;61984 61984 18 DSLGTVER Unmodified 875.43486 0.43486035 632 O95239 KIF4A Chromosome-associated kinesin KIF4A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 22.186 22.421 2 0.042495 23524 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 84.568 48.382 103900000 0 0 0 0 8272700 0 9369800 13103000 9347200 0 0 21639000 19981000 0 22184000 9126 632 8308 77537;77538;77539;77540;77541;77542;77543 61985 61985 0 DSLGTVERTQDSEGSFK Unmodified 1854.8595 0.85954994 632 O95239 KIF4A Chromosome-associated kinesin KIF4A yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 47.767 42.547 3 0.010982 52916 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 38.261 31.728 28246000 0 28246000 0 0 0 0 0 0 0 0 0 0 0 0 0 9127 632 8309 77544;77545 61986;61987;61988 61988 3 DSLGVYCIDAYNETMTEK Unmodified 2107.9078 0.90782204 5194 Q9Y4C2 TCAF1 TRPM8 channel-associated factor 1 yes yes 0 0 0 By MS/MS 2 0 1 1 82.998 78.294 2 4.8572E-06 97408 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.151 86.997 25982000 0 25982000 0 0 0 0 0 0 0 0 0 0 0 0 0 9128 5194 8310 77546 61989 61989 1 DSLHQPQYVEK Unmodified 1342.6517 0.65172941 3701 Q93008 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 2 28.897 29.046 2;3 0.004665 30382 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.143 52.789 165340000 0 0 0 7604000 9112500 16499000 7327100 11030000 8601500 22741000 20365000 0 15961000 18350000 27748000 9129 3701 8311 77547;77548;77549;77550;77551;77552;77553;77554;77555;77556;77557;77558 61990;61991;61992;61993 61990 3 DSLHQTILTQELEK Unmodified 1653.8574 0.85736509 672 O95613 PCNT Pericentrin yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 73.316 69.188 3 0.00024735 84581 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 59.607 47.052 28968000 0 21637000 7331000 0 0 0 0 0 0 0 0 0 0 0 0 9130 672 8312 77559;77560;77561 61994;61995;61996;61997 61997 4 DSLIFLVDASK Unmodified 1206.6496 0.64960415 973 P12956 XRCC6 X-ray repair cross-complementing protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 86.831 86.938 2 0.0013916 100901 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 73.067 53.796 79098000 0 0 0 0 4690100 9455300 5051500 3340400 5396700 9102300 7240400 8877400 2964500 6621800 16358000 9131 973 8313 77562;77563;77564;77565;77566;77567;77568;77569;77570;77571;77572 61998;61999;62000;62001;62002;62003;62004;62005;62006;62007;62008;62009 62004 12 DSLIIIDELGR Unmodified 1242.682 0.68196691 1474 P43246 MSH2 DNA mismatch repair protein Msh2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 88.049 88.119 2 0.0025056 101849 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.688 61.417 57630000 0 0 0 1202000 2372900 7197400 3129000 3784200 3134900 9038300 5376900 4315800 2581300 4007200 11490000 9132 1474 8314 77573;77574;77575;77576;77577;77578;77579;77580;77581;77582;77583;77584 62010;62011;62012;62013;62014;62015;62016;62017;62018;62019;62020;62021 62013 12 DSLILPFQFSSEK Unmodified 1509.7715 0.7715102 3510 Q8TE02 ELP5 Elongator complex protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 91.514 91.622 2 0.0025331 106178 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.01 51.574 27454000 0 0 0 0 1073700 2293400 1407200 1542000 1712000 3706300 2734800 3146700 1602900 2390500 5844300 9133 3510 8315 77585;77586;77587;77588;77589;77590;77591;77592;77593;77594;77595 62022;62023;62024;62025;62026;62027;62028;62029;62030;62031;62032 62024 11 DSLINLK Unmodified 801.45962 0.45961853 3349 Q8N5K1 CISD2 CDGSH iron-sulfur domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 54.231 54.864 2 0.033465 61913 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 71.949 33.579 19105000 0 0 0 0 0 0 0 0 0 0 0 10560000 0 0 8545000 9134 3349 8316 77596;77597 62033 62033 1 DSLLEPALASVVIHK Unmodified 1590.8981 0.8981077 2956 Q6PIW4 FIGNL1 Fidgetin-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 3 9 1 1 1 1 1 1 1 1 1 1 1 1 88.846 87.656 3 0.00026555 110309 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.083 80.044 58537000 8996000 24693000 2322300 0 0 1979300 0 1540900 1997200 3295600 1818800 2555000 1070400 1778300 6490400 9135 2956 8317 77598;77599;77600;77601;77602;77603;77604;77605;77606;77607;77608;77609 62034;62035;62036;62037 62034 4 DSLLQDGEFSMDLR Oxidation (M) 1640.7352 0.73520105 846 P07737 PFN1 Profilin-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.912 78.97 2 4.5662E-14 90808 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 114.86 104.86 346350000 0 0 0 5706700 6914200 9855600 8950400 9212000 5919000 14279000 48420000 43513000 10863000 39282000 143440000 9136 846 8318 77610;77611;77612;77613;77614;77615;77616;77617;77618;77619;77620;77621 62038;62039;62040;62041;62042;62043;62044;62045;62046;62047;62048;62049;62050 62041 1049 13 DSLLTHIQNLK Unmodified 1280.7089 0.70885036 5238 Q9Y5L0 TNPO3 Transportin-3 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 74.865 74.915 3 0.0090105 85835 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.829 35.514 31327000 0 0 0 0 1326500 4574300 0 0 0 4839900 0 0 2453200 3929800 14203000 9137 5238 8319 77622;77623;77624;77625;77626;77627 62051 62051 1 DSLNSDCLTSFK Unmodified 1385.6133 0.613295 3389 Q8NB91 FANCB Fanconi anemia group B protein yes yes 0 0 0 By MS/MS 2 0 1 1 66.42 60.502 2 0.022785 77424 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.143 47.056 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9138 3389 8320 77628 62052 62052 1 DSLPPSPLLFPGK Unmodified 1366.7497 0.74965254 3391 Q8NBF2 NHLRC2 NHL repeat-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 88.112 84.604 2 0.0036534 104677 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.006 61.176 223000000 0 221400000 1593400 0 0 0 0 0 0 0 0 0 0 0 0 9139 3391 8321 77629;77630;77631 62053;62054;62055;62056;62057;62058 62053 6 DSLPSSDTLDLNAEEK Unmodified 1732.8003 0.80030372 3065 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.309 66.393 2 0.00026552 75821 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 69.03 55.221 77321000 0 0 0 3732100 4007200 6256400 5765200 3546100 4660100 5359400 7601900 13743000 6563400 6367200 9718800 9140 3065 8322 77632;77633;77634;77635;77636;77637;77638;77639;77640;77641;77642;77643 62059;62060;62061;62062;62063;62064;62065;62066;62067;62068;62069;62070 62062 12 DSLPVCPVDASGCFTTEVTDFAGQYVK Unmodified 2962.3365 0.3364748 1441 P41252 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 1 3 97.602 92.356 2;3 2.157E-229 115319 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 225.13 214.27 912490000 34353000 878140000 0 0 0 0 0 0 0 0 0 0 0 0 0 9141 1441 8323 77644;77645;77646;77647 62071;62072;62073;62074;62075 62072 5 DSLQELSTEQK Unmodified 1276.6147 0.61467521 4023 Q99567 NUP88 Nuclear pore complex protein Nup88 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 40.085 40.435 2 0.013959 44849 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 46.033 26.246 203790000 0 0 0 0 0 26235000 0 16253000 21956000 23739000 23656000 26632000 24353000 0 40968000 9142 4023 8324 77648;77649;77650;77651;77652;77653;77654;77655 62076 62076 1 DSLQPYEAAYLSK Unmodified 1483.7195 0.71947463 5047 Q9UP83 COG5 Conserved oligomeric Golgi complex subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 71.85 71.506 2 0.0062625 82478 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 54.784 29.94 224810000 0 178850000 0 2239000 2752000 0 2903900 3887600 2288700 5792700 4958200 6689700 4243600 3897100 6305000 9143 5047 8325 77656;77657;77658;77659;77660;77661;77662;77663;77664;77665;77666;77667 62077;62078;62079;62080;62081;62082;62083;62084 62081 7 DSLRSTPSHGSVSSLNSTGSLSPK Unmodified 2400.1881 0.18809472 4836 Q9UBC2 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 yes yes 0 0 1 By MS/MS 2 0 1 1 53.86 45.797 3 1.3906E-07 63002 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.994 59.371 9422900 9422900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9144 4836 8326 77668 62085;62086 62086 2 DSLSEEVQDLK Unmodified 1261.6038 0.60377617 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.14 65.228 2 0.0031367 74702 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 78.556 63.794 60145000 0 0 0 2746800 2100200 3964900 5400000 3988700 4378500 4375800 7208800 6956600 5307000 4559800 9158100 9145 2446 8327 77669;77670;77671;77672;77673;77674;77675;77676;77677;77678;77679;77680 62087;62088;62089;62090;62091;62092 62092 6 DSLSPGQERPYSTVR Unmodified 1690.8275 0.82746195 3296 Q8IZL8 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.551 38.731 3 4.8558E-07 42761 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 76.588 59.844 157820000 0 0 0 7961900 9125300 8040800 9591300 11183000 5532500 13852000 13899000 16460000 17498000 21768000 22911000 9146 3296 8328 77681;77682;77683;77684;77685;77686;77687;77688;77689;77690;77691;77692 62093;62094;62095;62096;62097;62098;62099;62100;62101;62102;62103;62104;62105;62106;62107 62100 15 DSLSPVLHPSDLILTR Unmodified 1761.9625 0.96249887 4519 Q9HCN4 GPN1 GPN-loop GTPase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 84.009 84.145 3 0.00010409 97144 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.819 66.412 54105000 0 0 0 0 0 9111900 0 0 5303900 8906600 6355900 0 0 5084400 19342000 9147 4519 8329 77693;77694;77695;77696;77697;77698 62108;62109;62110;62111 62109 4 DSLSVNEFK Unmodified 1037.5029 0.50293991 4029 Q99584 S100A13 Protein S100-A13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 2 1 1 1 1 1 54 52.699 2 0.0016692 66196 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.15 85.589 1359000000 45441000 1002100000 0 6842300 6063500 0 9278500 9128600 0 0 65528000 47812000 0 43506000 123210000 9148 4029 8330 77699;77700;77701;77702;77703;77704;77705;77706;77707;77708;77709;77710;77711 62112;62113;62114;62115;62116;62117;62118;62119;62120 62116 8 DSLTDLYVQHAIPLPQR Unmodified 1965.032 0.031975416 4185 Q9BVC5 C2orf49 Ashwin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 84.906 85.05 3 0.00053303 98493 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 53.828 46.878 25116000 0 0 0 0 0 0 0 0 3335700 8277900 0 0 0 1984200 11519000 9149 4185 8331 77712;77713;77714;77715 62121;62122;62123;62124 62121 4 DSLTGSSDLYK Unmodified 1184.5561 0.55609769 2425 Q14671 PUM1 Pumilio homolog 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 43.8 43.959 2 3.1899E-11 49082 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 155.84 143.89 413440000 0 0 0 29249000 28205000 25482000 31416000 38283000 30471000 41989000 52583000 40439000 0 37888000 57434000 9150 2425 8332 77716;77717;77718;77719;77720;77721;77722;77723;77724;77725;77726 62125;62126;62127;62128;62129;62130;62131 62126 4 DSLTLVFVETK Unmodified 1250.6758 0.6758189 170 O00571 DDX3X ATP-dependent RNA helicase DDX3X yes yes 0 0 0 By MS/MS 2 0 1 1 89.201 81.07 2 0.0032572 105663 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.048 83.841 30499000 30499000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9151 170 8333 77727 62132;62133 62133 2 DSLVDIIGICK Unmodified 1231.6482 0.64822394 1221 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 87.7 86.584 2 1.2389E-06 107853 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 123.35 106.26 383380000 36426000 231520000 8740800 2938600 4100400 12823000 6783100 6971400 6375900 13261000 9326000 9259200 4988700 7625500 22234000 9152 1221 8334 77728;77729;77730;77731;77732;77733;77734;77735;77736;77737;77738;77739;77740;77741;77742;77743 62134;62135;62136;62137;62138;62139;62140;62141;62142;62143;62144;62145;62146;62147;62148;62149 62143 15 DSLVLLGR Unmodified 871.51272 0.51271674 575 O76071 CIAO1 Probable cytosolic iron-sulfur protein assembly protein CIAO1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 68.464 68.454 2 0.010188 78296 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 80.462 37.339 137750000 0 0 0 10863000 14328000 0 16756000 14733000 0 17309000 23297000 0 21013000 19451000 0 9153 575 8335 77744;77745;77746;77747;77748;77749;77750;77751;77752 62150;62151;62152;62153;62154;62155 62151 6 DSLVSSLQFCK Unmodified 1282.6227 0.62273747 4818 Q9P2I0 CPSF2 Cleavage and polyadenylation specificity factor subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.105 76.167 2 0.0051105 87382 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.1 60.719 60186000 0 0 0 2217300 2105000 3362000 2823900 2967400 4359900 4139000 6549700 10434000 4675600 7496800 9056000 9154 4818 8336 77753;77754;77755;77756;77757;77758;77759;77760;77761;77762;77763;77764 62156;62157;62158;62159;62160;62161;62162 62157 6 DSLVYQYLQK Unmodified 1255.6449 0.64485312 3391 Q8NBF2 NHLRC2 NHL repeat-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 77.5 73.841 2 2.4323E-06 92084 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 149.4 134.14 162350000 0 160160000 2181600 0 0 0 0 0 0 0 0 0 0 0 0 9155 3391 8337 77765;77766;77767 62163;62164;62165;62166 62163 4 DSLYAQGK Unmodified 880.42905 0.42904669 2008 P83881 RPL36A 60S ribosomal protein L36a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.621 16.8 2 0.015124 16690 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 69.383 39.577 294230000 0 0 0 13967000 16010000 18059000 23378000 14664000 16959000 22366000 32055000 39869000 27413000 32999000 36488000 9156 2008 8338 77768;77769;77770;77771;77772;77773;77774;77775;77776;77777;77778;77779 62167;62168;62169;62170;62171;62172;62173;62174 62173 2 DSLYVAVADFEGDK Unmodified 1527.7093 0.70930387 10 A1X283 SH3PXD2B SH3 and PX domain-containing protein 2B yes yes 0 0 0 By MS/MS 2 0 1 1 88.47 80.339 2 0.0018261 104533 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.845 58.73 6563500 6563500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9157 10 8339 77780 62175 62175 1 DSMIENMK Oxidation (M) 982.40997 0.4099675 430 O60763 USO1 General vesicular transport factor p115 yes yes 0 1 0 By MS/MS 2 0 1 1 22.157 18.274 2 0.028122 24156 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.255 53.735 10014000 0 10014000 0 0 0 0 0 0 0 0 0 0 0 0 0 9158 430 8340 77781 62176 62176 1 DSMIENMK Unmodified 966.41505 0.41505288 430 O60763 USO1 General vesicular transport factor p115 yes yes 0 0 0 By MS/MS 2 0 1 1 39.71 34.699 2 0.025637 45360 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.67 92.871 104150000 0 104150000 0 0 0 0 0 0 0 0 0 0 0 0 0 9159 430 8340 77782 62177 62177 0 DSMTVSEVTASISSPSEEDASEMPEFLDK Unmodified 3117.353 0.3529723 1638 P50851 LRBA Lipopolysaccharide-responsive and beige-like anchor protein yes yes 0 0 0 By MS/MS 3 0 1 1 91.715 88.495 3 0.045051 105979 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 15.938 13.882 2227000 0 2227000 0 0 0 0 0 0 0 0 0 0 0 0 0 9160 1638 8341 77783 62178 62178 1 DSNFAGDLVR Unmodified 1092.52 0.51998696 3199 Q86XP3 DDX42 ATP-dependent RNA helicase DDX42 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 57.863 58.179 2 0.0049526 66291 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 70.908 60.494 129780000 0 0 0 0 0 0 12462000 0 11873000 0 21041000 24530000 15567000 16733000 27577000 9161 3199 8342 77784;77785;77786;77787;77788;77789;77790 62179;62180;62181;62182;62183 62183 4 DSNFQNPFK Unmodified 1095.4985 0.49852324 4414 Q9H6E4 CCDC134 Coiled-coil domain-containing protein 134 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 60.348 57.497 2 0.0075088 72752 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.093 86.626 27633000 0 23032000 0 0 0 0 0 0 0 0 0 0 0 4601000 0 9162 4414 8343 77791;77792 62184;62185;62186 62184 3 DSNFRLVSSEQALK Unmodified 1592.8158 0.81583463 2789 Q5TA45 CPSF3L Integrator complex subunit 11 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 66.697 60.671 3 0.01727 80994 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.801 32.826 16082000 9117300 0 6964500 0 0 0 0 0 0 0 0 0 0 0 0 9163 2789 8344 77793;77794 62187;62188 62187 1 DSNGAILVYDITDEDSFQK Unmodified 2128.9801 0.980059 4984 Q9UL25 RAB21 Ras-related protein Rab-21 yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 87.177 87.333 2 8.2617E-05 101316 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 61.212 56.229 7895100 0 0 0 0 0 0 0 0 0 2842300 1668800 0 0 0 3383900 9164 4984 8345 77795;77796;77797 62189;62190 62190 2 DSNKPVTIPENSEIK Unmodified 1669.8523 0.85227972 2456 Q14966 ZNF638 Zinc finger protein 638 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 46.997 46.707 2;3 0.00053668 52604 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 61.641 46.006 160950000 0 19098000 0 10095000 9167000 9753300 9698900 10686000 7227400 10848000 13639000 18899000 17407000 11699000 12728000 9165 2456 8346 77798;77799;77800;77801;77802;77803;77804;77805;77806;77807;77808;77809;77810 62191;62192;62193;62194;62195;62196 62191 6 DSNNLCLHFNPR Unmodified 1485.6783 0.67829529 881 P09382 LGALS1 Galectin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 59.006 59.384 3 0.0011139 66725 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.408 55.97 131000000 0 0 0 0 0 0 0 0 0 0 17993000 29559000 7057000 23288000 53107000 9166 881 8347 77811;77812;77813;77814;77815 62197;62198;62199;62200;62201 62197 5 DSNVTASPTAPACPSDK Unmodified 1716.7625 0.76247843 2479 Q15025 TNIP1 TNFAIP3-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 32.643 32.774 2 0.0019993 36074 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 61.375 38.139 18637000 0 0 0 0 2056400 3194000 2456800 0 2464300 0 0 0 0 3242500 5223100 9167 2479 8348 77816;77817;77818;77819;77820;77821 62202;62203;62204;62205 62202 4 DSPCQLEALK Unmodified 1159.5543 0.55432356 979 P13489 RNH1 Ribonuclease inhibitor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.27 3.47 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 54.409 54.281 2 0.0033866 54406 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.679 57.896 183460000 58095000 0 0 7725800 5024600 17595000 12311000 5749200 0 8124300 0 20826000 15632000 10467000 21911000 9168 979 8349 77822;77823;77824;77825;77826;77827;77828;77829;77830;77831;77832;77833;77834;77835;77836 62206;62207;62208;62209;62210;62211;62212;62213;62214;62215;62216;62217;62218;62219;62220;62221;62222 62209 17 DSPDLLLLLR Unmodified 1153.6707 0.67067394 3580 Q8WX92 NELFB Negative elongation factor B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 95.239 95.316 2 0.0082409 110541 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 70.919 38.078 62974000 0 0 0 1547600 2565700 6451400 3597000 4906200 3923900 8050000 6280400 4442700 3451800 5495800 12261000 9169 3580 8350 77837;77838;77839;77840;77841;77842;77843;77844;77845;77846;77847;77848 62223;62224;62225;62226;62227;62228;62229;62230;62231;62232;62233;62234;62235;62236;62237;62238 62238 16 DSPEVHQDLNALK Unmodified 1464.7209 0.72087161 4694 Q9NWA0 MED9 Mediator of RNA polymerase II transcription subunit 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.72 2.86 2 1 15 3 1 1 1 2 1 1 1 2 1 1 1 2 46.064 45.341 2;3 0.0015636 57691 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.533 51.901 293890000 0 128510000 0 6001900 6044100 6810300 11503000 10883000 7740000 15225000 22010000 20500000 17330000 10327000 31007000 9170 4694 8351 77849;77850;77851;77852;77853;77854;77855;77856;77857;77858;77859;77860;77861;77862;77863;77864;77865;77866 62239;62240;62241;62242;62243;62244;62245;62246;62247 62239 8 DSPHMQDPNQADEEAMTQIIR Unmodified 2425.0638 0.063822183 1163 P23511 NFYA Nuclear transcription factor Y subunit alpha yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 74.836 75.042 3 1.7644E-11 86196 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.635 71.447 15363000 0 0 0 0 0 0 0 0 0 4433800 0 0 0 0 10930000 9171 1163 8352 77867;77868 62248 62248 1 DSPHMQDPNQADEEAMTQIIRVS Oxidation (M) 2627.1592 0.15917913 1163 P23511 NFYA Nuclear transcription factor Y subunit alpha yes yes 0 1 1 By MS/MS 2.5 0.5 1 1 2 82.274 78.272 3 3.325E-07 93747 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 71.651 69.038 39166000 0 39166000 0 0 0 0 0 0 0 0 0 0 0 0 0 9172 1163 8353 77869;77870 62249;62250;62251 62251 1676;1677 3 DSPHMQDPNQADEEAMTQIIRVS Unmodified 2611.1643 0.16426451 1163 P23511 NFYA Nuclear transcription factor Y subunit alpha yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 84.692 80.679 3 3.922E-14 100331 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.689 76.507 50496000 0 50496000 0 0 0 0 0 0 0 0 0 0 0 0 0 9173 1163 8353 77871;77872 62252;62253 62252 2 DSPHMQDPNQADEEAMTQIIRVS 2 Oxidation (M) 2643.1541 0.15409375 1163 P23511 NFYA Nuclear transcription factor Y subunit alpha yes yes 0 2 1 By MS/MS 3 0 2 2 64.674 59.937 3 0.0021793 73379 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 44.258 37.065 13873000 0 13873000 0 0 0 0 0 0 0 0 0 0 0 0 0 9174 1163 8353 77873;77874 62254;62255 62255 1676;1677 1 DSPLLLQQISAMR Oxidation (M) 1486.7814 0.78136338 2391 Q14203 DCTN1 Dynactin subunit 1 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 81.088 81.184 2 1.7376E-05 93649 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.9 73.647 93496000 0 0 0 0 6441500 10834000 8374200 2251600 0 10768000 10983000 13090000 8473900 8166200 14113000 9175 2391 8354 77875;77876;77877;77878;77879;77880;77881;77882;77883;77884 62256;62257 62256 3886 2 DSPRFRAALEEVEGDVAELELK Unmodified 2472.2496 0.24963234 2491 Q15057 ACAP2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 yes yes 0 0 2 By MS/MS 2 0 1 1 98.2 90.069 3 1.2651E-39 116242 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 125.6 86.395 9367200 9367200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9176 2491 8355 77885 62258 62258 1 DSPSVWAAVPGK Unmodified 1212.6139 0.61388734 846 P07737;CON__P02584 PFN1 Profilin-1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.08 3.94 1 8 3 12 5 6 1 1 1 1 1 1 1 1 1 1 1 1 1 70.519 68.401 1;2 2.5636E-22 83306 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 196.88 168.48 18505000000 901470000 15611000000 82100000 36514000 28726000 43628000 57924000 52354000 30940000 55413000 320360000 235700000 53152000 207130000 788310000 9177 846 8356 77886;77887;77888;77889;77890;77891;77892;77893;77894;77895;77896;77897;77898;77899;77900;77901;77902;77903;77904;77905;77906;77907;77908;77909 62259;62260;62261;62262;62263;62264;62265;62266;62267;62268;62269;62270;62271;62272;62273;62274;62275;62276;62277;62278;62279;62280;62281;62282;62283;62284;62285;62286 62269 27 DSPTQEREELFIQK Unmodified 1718.8475 0.84752869 2442 Q14738 PPP2R5D Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56.271 55.18 3 0.00038597 62530 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 52.265 46.361 326730000 44900000 64256000 22908000 9461700 6013000 26055000 9792400 11176000 10083000 26211000 15812000 21691000 14159000 13891000 30324000 9178 2442 8357 77910;77911;77912;77913;77914;77915;77916;77917;77918;77919;77920;77921;77922;77923;77924 62287;62288;62289;62290;62291;62292;62293;62294;62295;62296;62297 62287 10 DSPVCPHFTTNGNENSSIEK Unmodified 2231.9753 0.97532475 1638 P50851 LRBA Lipopolysaccharide-responsive and beige-like anchor protein yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 54.736 49.389 3 1.902E-48 63778 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 133.09 118 62123000 0 62123000 0 0 0 0 0 0 0 0 0 0 0 0 0 9179 1638 8358 77925;77926 62298;62299;62300;62301 62298 4 DSPYMAFIHPATGGYNPDLVR Oxidation (M) 2336.0896 0.089566649 487 O75369 FLNB Filamin-B yes yes 0 1 0 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 81.698 81.758 3 5.7473E-06 94246 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.055 40.814 23367000 0 0 0 0 1386300 0 1825900 0 0 0 0 0 0 4426500 15729000 9180 487 8359 77927;77928;77929;77930 62302 62302 613 1 DSPYNFSNPPITSLEELK Unmodified 2049.9895 0.98950148 2594 Q15911 ZFHX3 Zinc finger homeobox protein 3 yes yes 0 0 0 By MS/MS 2 0 1 1 92.859 87.948 2 1.6398E-07 109211 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.854 74.794 18507000 0 18507000 0 0 0 0 0 0 0 0 0 0 0 0 0 9181 2594 8360 77931 62303 62303 1 DSQAALPK Unmodified 828.43413 0.43413207 2621 Q16643 DBN1 Drebrin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 18.898 19.114 2 0.03349 19587 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 53.679 31.548 93442000 0 0 0 5810400 5619800 0 7236800 4902700 4756900 9694800 11473000 12943000 11104000 7067500 12833000 9182 2621 8361 77932;77933;77934;77935;77936;77937;77938;77939;77940;77941;77942 62304;62305;62306 62304 3 DSQDAGGFGPEDR Unmodified 1349.5484 0.54838655 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.439 30.628 2 1.2829E-06 32212 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.937 72.666 71221000 0 0 0 3781900 4699700 6073900 3701500 5641300 2811600 5489300 7716600 11014000 6208700 5741300 8341600 9183 2501 8362 77943;77944;77945;77946;77947;77948;77949;77950;77951;77952;77953;77954 62307;62308;62309;62310;62311;62312;62313;62314;62315;62316;62317 62309 11 DSQDASAEQSDHDDEVASLASASGGFGTK Unmodified 2881.2122 0.2121968 2927 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 68.043 68.254 3 3.165E-15 77775 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.158 49.254 25433000 0 0 0 0 0 5338300 0 3370500 0 4911800 5128300 0 0 0 6684100 9184 2927 8363 77955;77956;77957;77958;77959 62318;62319;62320;62321;62322 62320 5 DSQGENMFLR Unmodified 1195.5292 0.52917144 3311 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.566 55.695 2 0.030328 63517 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 92.491 83.277 129460000 0 0 0 4975900 4579500 9509200 7338000 11671000 6381100 11646000 15098000 15679000 10907000 12402000 19268000 9185 3311 8364 77960;77961;77962;77963;77964;77965;77966;77967;77968;77969;77970;77971 62323;62324;62325;62326 62324 3 DSQGENMFLR Oxidation (M) 1211.5241 0.52408606 3311 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 yes yes 0 1 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 40.367 40.62 2 0.019951 44963 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 43.083 22.754 16571000 0 0 0 0 0 0 0 0 0 11268000 0 0 5302600 0 0 9186 3311 8364 77972;77973;77974 62327;62328 62328 4905 2 DSQICELK Unmodified 991.46445 0.46444592 1758 P55145 MANF Mesencephalic astrocyte-derived neurotrophic factor yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 30.774 30.876 2 0.0070221 33810 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 91.069 43.22 50840000 0 0 0 10294000 2444400 4586700 3175900 2506400 2354700 5951300 8178600 11348000 0 0 0 9187 1758 8365 77975;77976;77977;77978;77979;77980;77981;77982;77983 62329;62330 62330 2 DSQLIVSSAK Unmodified 1046.5608 0.56078914 3107 Q7Z5K2 WAPAL Wings apart-like protein homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 35.306 35.476 2 0.0050412 39464 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 70.552 36.299 129920000 0 0 0 8005000 7641600 11648000 7180900 10031000 7883000 13116000 12905000 16969000 11883000 0 22660000 9188 3107 8366 77984;77985;77986;77987;77988;77989;77990;77991;77992;77993;77994 62331;62332;62333;62334;62335;62336;62337;62338 62331 8 DSQLQFEAISDEEK Unmodified 1637.7421 0.74206056 1583 P49643 PRIM2 DNA primase large subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 68.417 67.208 2 4.4159E-19 76952 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 162.68 131.4 225440000 13053000 77098000 0 6393600 6199200 9513000 10270000 9555200 6916000 14307000 14647000 18523000 13552000 6774200 18640000 9189 1583 8367 77995;77996;77997;77998;77999;78000;78001;78002;78003;78004;78005;78006;78007;78008;78009 62339;62340;62341;62342;62343;62344;62345;62346;62347;62348;62349;62350;62351;62352;62353;62354 62344 16 DSQPSLDLASATSGDK Unmodified 1590.7373 0.73730954 2734 Q5JSH3 WDR44 WD repeat-containing protein 44 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.83 3.76 2 1 9 2 1 1 1 1 1 1 1 1 1 1 68.173 68.041 2 2.3704E-19 65572 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 107.37 88.7 222570000 58968000 51271000 0 6950600 8312500 0 0 0 0 0 19874000 20409000 10297000 14313000 32174000 9190 2734 8368 78010;78011;78012;78013;78014;78015;78016;78017;78018;78019;78020;78021 62355;62356;62357;62358;62359;62360;62361;62362;62363;62364;62365;62366;62367;62368 62366 14 DSQSPNTATQRIVQDK Unmodified 1786.881 0.88095408 215 O14787 TNPO2 Transportin-2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 35.995 31.099 3 0.0026899 40690 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 51.76 41.275 33620000 7211800 23136000 3272000 0 0 0 0 0 0 0 0 0 0 0 0 9191 215 8369 78022;78023;78024 62369 62369 1 DSQTQAILTK Unmodified 1103.5823 0.58225287 2232 Q13098 GPS1 COP9 signalosome complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.054 33.238 2 0.00090415 35807 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 115.82 78.666 195620000 0 0 0 8760000 9396600 15238000 13272000 8927100 5917800 21849000 21550000 23531000 12481000 14886000 39809000 9192 2232 8370 78025;78026;78027;78028;78029;78030;78031;78032;78033;78034;78035;78036 62370;62371;62372;62373;62374;62375;62376;62377;62378;62379;62380 62377 10 DSQVGTVNYMPPEAIK Oxidation (M) 1763.84 0.84000047 1331 P33981 TTK Dual specificity protein kinase TTK yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 62.351 62.223 2 1.8529E-27 70803 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 127.17 114.96 63984000 0 0 0 5554000 11299000 10530000 12940000 0 9614000 0 0 0 14047000 0 0 9193 1331 8371 78037;78038;78039;78040;78041;78042 62381;62382;62383;62384;62385;62386;62387 62383 1985 7 DSQVGTVNYMPPEAIK Unmodified 1747.8451 0.84508585 1331 P33981 TTK Dual specificity protein kinase TTK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.76 71.827 2 2.2164E-27 82213 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 129.71 116.53 127470000 0 0 0 4345900 6220100 14024000 7731900 9995200 8482400 10624000 13162000 12396000 9540700 11535000 19418000 9194 1331 8371 78043;78044;78045;78046;78047;78048;78049;78050;78051;78052;78053;78054 62388;62389;62390;62391;62392;62393;62394;62395;62396;62397;62398;62399;62400;62401;62402;62403;62404 62394 17 DSQVVQVVLDGLK Unmodified 1398.7718 0.77184455 163 O00505 KPNA3 Importin subunit alpha-4 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 90.682 89.923 2 6.3436E-07 104109 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 114.86 90.009 425830000 0 365270000 5081100 1169100 1490400 3385000 1989800 3234400 3379100 9761900 5015100 4660600 2317100 4830100 14249000 9195 163 8372 78055;78056;78057;78058;78059;78060;78061;78062;78063;78064;78065;78066;78067;78068;78069 62405;62406;62407;62408;62409;62410;62411;62412;62413;62414;62415;62416;62417;62418 62410 13 DSRLPISVDSPPAAADSNTTAASNVDK Unmodified 2698.3046 0.30458104 2676 Q3V6T2 CCDC88A Girdin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 68.792 68.983 3 6.5641E-21 79229 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 67.496 60.847 35906000 0 0 0 0 0 5068800 4908300 4553400 4622500 0 5782900 7052400 0 3918200 0 9196 2676 8373 78070;78071;78072;78073;78074;78075;78076;78077 62419;62420;62421;62422;62423;62424;62425;62426;62427 62427 8 DSRLQDQRQNSPAGNK Unmodified 1812.8827 0.88268542 4047 Q99700 ATXN2 Ataxin-2 yes yes 0 0 2 By MS/MS 2 0 2 2 13.937 9.9418 3;4 0.0018936 14941 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.574 57.83 34809000 34809000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9197 4047 8374 78078;78079 62428;62429 62428 2 DSRPSQAAGDNQGDEAK Unmodified 1744.7612 0.76123288 5122 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 7.2745 6.9086 3 2.1927E-52 5749 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 160.64 156.77 701880000 0 37456000 0 23544000 28692000 34869000 27427000 39826000 33875000 47040000 77352000 92127000 100500000 67810000 91368000 9198 5122 8375 78080;78081;78082;78083;78084;78085;78086;78087;78088;78089;78090;78091;78092;78093 62430;62431;62432;62433;62434;62435;62436;62437;62438;62439;62440;62441;62442 62440 13 DSSAAQPGVAFSVDNTIK Unmodified 1805.8796 0.8795571 5065 Q9UQ13 SHOC2 Leucine-rich repeat protein SHOC-2 yes yes 0 0 0 By MS/MS 10 0 1 1 73.408 73.393 2 0.0023254 84628 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 65.179 49.977 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9199 5065 8376 78094 62443 62443 1 DSSDPNELYVNHK Unmodified 1516.6794 0.67940073 260 O15160 POLR1C DNA-directed RNA polymerases I and III subunit RPAC1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.09 3.85 4 7 2 2 1 1 1 1 1 1 1 33.225 31.366 2;3 0.0020394 39617 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 63.966 58.242 386230000 14291000 263730000 0 0 0 19683000 10290000 9714000 11620000 15347000 0 20986000 0 0 20575000 9200 260 8377 78095;78096;78097;78098;78099;78100;78101;78102;78103;78104;78105 62444;62445;62446;62447;62448;62449;62450 62446 6 DSSDSADGRATPSENLVPSSAR Unmodified 2218.0098 0.009796003 3357 Q8N684 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 45.545 45.758 3 3.2056E-05 51451 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 48.656 43.551 44236000 0 0 0 0 3081500 0 5513000 5672900 0 0 7157700 0 8486600 7790100 6534500 9201 3357 8378 78106;78107;78108;78109;78110;78111;78112;78113 62451;62452;62453;62454;62455;62456;62457 62455 7 DSSEDDISRSENEK Unmodified 1609.6704 0.67035218 2835 Q5W0B1 RNF219 RING finger protein 219 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 14.273 13.905 3 0.00035219 12814 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 68.034 60.31 107680000 0 14164000 0 0 6250700 6700200 4084000 5457600 4681300 10506000 8826700 12582000 11122000 6000000 17300000 9202 2835 8379 78114;78115;78116;78117;78118;78119;78120;78121;78122;78123;78124;78125;78126 62458;62459;62460;62461;62462;62463;62464;62465;62466;62467 62464 10 DSSESQLASTESDKPTTGR Unmodified 1994.9029 0.90287132 3748 Q96B23 C18orf25 Uncharacterized protein C18orf25 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 27.993 28.255 3 2.1578E-06 29561 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.874 61.895 81330000 0 0 0 0 4303900 0 4649400 6492000 4889500 8714400 10105000 9827900 10090000 5517600 16741000 9203 3748 8380 78127;78128;78129;78130;78131;78132;78133;78134;78135;78136 62468;62469;62470;62471;62472;62473;62474;62475;62476;62477 62470 10 DSSGQHVDVSPTSQR Unmodified 1598.7285 0.72847619 4061 Q99798 ACO2 Aconitate hydratase, mitochondrial yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 23.538 19.544 3 5.4456E-05 25801 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.376 67.062 18321000 0 18321000 0 0 0 0 0 0 0 0 0 0 0 0 0 9204 4061 8381 78137;78138 62478;62479 62479 2 DSSLPPHILEVIDK Unmodified 1561.8352 0.83517309 4168 Q9BUQ8 DDX23 Probable ATP-dependent RNA helicase DDX23 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 87.455 82.32 3 2.3738E-05 104054 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.729 70.807 52220000 6789900 41523000 3907200 0 0 0 0 0 0 0 0 0 0 0 0 9205 4168 8382 78139;78140;78141 62480;62481;62482 62481 3 DSSNVEEAFLR Unmodified 1265.5888 0.58879481 3210 Q86YS6 RAB43 Ras-related protein Rab-43 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 68.15 68.109 2 0.0016512 78099 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 71.349 55.734 27927000 0 0 0 1785800 2738400 0 2815300 4035500 0 4821800 7193300 0 4537200 0 0 9206 3210 8383 78142;78143;78144;78145;78146;78147;78148;78149;78150 62483;62484;62485;62486;62487;62488;62489;62490;62491;62492;62493 62485 11 DSSQGPCEPLPGPLTQPR Unmodified 1934.9156 0.91562503 242 O15027 SEC16A Protein transport protein Sec16A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.091 70.167 2 0.003025 80656 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 49.12 35.215 101500000 0 0 0 5229700 6222400 6539100 10282000 8965400 5117500 8164900 6670800 14033000 10061000 8487400 11730000 9207 242 8384 78151;78152;78153;78154;78155;78156;78157;78158;78159;78160;78161;78162 62494;62495;62496 62494 3 DSSQSPSQVDQFCK Unmodified 1611.6835 0.68349983 2337 Q13637 RAB32 Ras-related protein Rab-32 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.483 39.663 2 1.5934E-12 43117 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 120.77 103.86 67374000 0 0 0 3488700 3834300 5896100 4362200 4122100 4974800 5109700 8934500 7453700 4773900 6289100 8135100 9208 2337 8385 78163;78164;78165;78166;78167;78168;78169;78170;78171;78172;78173;78174 62497;62498;62499;62500;62501;62502;62503;62504;62505;62506;62507;62508 62500 12 DSSQTSRFYPVVK Unmodified 1512.7573 0.75725712 2961 Q6PKG0 LARP1 La-related protein 1 yes yes 0 0 1 By MS/MS By matching By MS/MS 2 0 3 1 1 1 58.946 52.967 3 0.02122 71583 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.725 28.748 46375000 32174000 12062000 2140200 0 0 0 0 0 0 0 0 0 0 0 0 9209 2961 8386 78175;78176;78177 62509 62509 1 DSSSEVFSDAAK Unmodified 1241.5412 0.54117591 2776 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 38.159 38.325 2 0.0030771 42365 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 75.387 70.402 63105000 0 0 0 3573200 4474900 6250700 5007700 5485800 4112800 5571400 6638300 7613200 0 6365600 8011200 9210 2776 8387 78178;78179;78180;78181;78182;78183;78184;78185;78186;78187;78188 62510;62511;62512;62513;62514;62515;62516;62517;62518;62519;62520 62516 11 DSSSGTERTGGRLGK Unmodified 1506.7386 0.73864694 199 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 yes yes 0 0 2 By MS/MS 2 0 1 1 9.667 5.8923 3 0.00089307 9906 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.614 33.053 13777000 13777000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9211 199 8388 78189 62521 62521 0 DSSSLSSCTSGILEER Unmodified 1726.768 0.76795774 4383 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.189 64.28 2 6.7158E-71 73478 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 178.32 168.67 292490000 0 0 0 13813000 19135000 17802000 19106000 21131000 14553000 34682000 43259000 33146000 21777000 21303000 32786000 9212 4383 8389 78190;78191;78192;78193;78194;78195;78196;78197;78198;78199;78200;78201 62522;62523;62524;62525;62526;62527;62528;62529;62530;62531;62532;62533;62534;62535 62523 14 DSSSMMQTLLTVTQNVEVPETPK 2 Oxidation (M) 2566.2142 0.21423439 5031 Q9UNF1 MAGED2 Melanoma-associated antigen D2 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 82.855 82.958 3 9.2476E-21 95823 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 85.35 83.558 284510000 0 0 0 0 16801000 20814000 12952000 17681000 15840000 44057000 43070000 27984000 22032000 23909000 39371000 9213 5031 8390 78202;78203;78204;78205;78206;78207;78208;78209;78210;78211;78212 62536;62537;62538;62539;62540;62541;62542;62543;62544;62545;62546;62547 62536 6377;6378 12 DSSSMMQTLLTVTQNVEVPETPK Oxidation (M) 2550.2193 0.21931977 5031 Q9UNF1 MAGED2 Melanoma-associated antigen D2 yes yes 0 1 0 By MS/MS By MS/MS 2.25 0.433 3 1 3 1 92.108 88.23 2;3 2.5683E-115 109069 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 168.41 156.62 72709000 0 71191000 1517600 0 0 0 0 0 0 0 0 0 0 0 0 9214 5031 8390 78213;78214;78215;78216 62548;62549;62550 62548 6377;6378 2 DSSSPHSGVPAEVLCR Unmodified 1696.7839 0.78388257 4683 Q9NVU0 POLR3E DNA-directed RNA polymerase III subunit RPC5 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 50.125 50.054 3 0.0019094 55734 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 33.36 25.769 21156000 0 0 0 3526300 0 6652500 5590200 0 0 0 0 0 0 5387300 0 9215 4683 8391 78217;78218;78219;78220 62551;62552;62553 62553 3 DSSSQTMPVEDK Unmodified 1322.566 0.56601045 5007 Q9ULV3 CIZ1 Cip1-interacting zinc finger protein yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 24.001 24.18 2 0.033663 25926 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 44.309 33.145 32297000 0 0 0 1968600 1228100 0 2183500 2978400 2000200 3824600 4886000 0 3763500 3493100 5970900 9216 5007 8392 78221;78222;78223;78224;78225;78226;78227;78228;78229;78230 62554;62555 62555 2 DSSSVVEWTQAPK Unmodified 1432.6834 0.68342347 3485 Q8TC07 TBC1D15 TBC1 domain family member 15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 62.295 61.122 2 2.1699E-08 70242 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 108.47 88.166 231920000 32837000 80031000 0 8469500 7365600 12304000 10813000 10796000 6745400 18593000 17966000 0 12901000 13100000 0 9217 3485 8393 78231;78232;78233;78234;78235;78236;78237;78238;78239;78240;78241;78242 62556;62557;62558;62559;62560;62561;62562;62563;62564;62565;62566;62567 62557 12 DSSTCPGDYVLSVSENSR Unmodified 1971.848 0.84799897 1500 P46109 CRKL Crk-like protein yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 72.054 72.196 2 3.1105E-05 82155 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 88.552 82.71 62313000 0 0 0 0 2628400 0 2640600 2500500 2874300 5068000 9623000 13039000 3020400 5566400 15352000 9218 1500 8394 78243;78244;78245;78246;78247;78248;78249;78250;78251;78252 62568;62569;62570;62571;62572;62573;62574 62572 7 DSSTMSHTVAGGGSGDHSHQVR Oxidation (M) 2224.9516 0.95156962 1443 P41743 PRKCI Protein kinase C iota type yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 7.296 7.4969 4 9.992E-155 5398 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 196.62 196.35 144800000 0 0 0 0 0 9593300 0 0 10339000 16372000 43335000 23877000 15164000 12313000 13808000 9219 1443 8395 78253;78254;78255;78256;78257;78258;78259;78260 62575;62576;62577;62578;62579;62580;62581;62582 62579 2276 8 DSSTMSHTVAGGGSGDHSHQVR Unmodified 2208.9567 0.956655 1443 P41743 PRKCI Protein kinase C iota type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 1 1 1 1 2 2 2 2 2 2 2 14.831 15.058 3;4 1.3839E-80 13706 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 145.9 144.04 295940000 0 0 0 12645000 9103100 7294800 16942000 12906000 11484000 30831000 25288000 26082000 34892000 24652000 83819000 9220 1443 8395 78261;78262;78263;78264;78265;78266;78267;78268;78269;78270;78271;78272;78273;78274;78275;78276;78277;78278;78279 62583;62584;62585;62586;62587;62588;62589;62590;62591;62592;62593 62587 11 DSSTSPGDYVLSVSENSR Unmodified 1898.8494 0.84937918 1499 P46108 CRK Adapter molecule crk yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 72.286 72.565 2 0.00069631 82691 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 51.211 38.011 16333000 0 0 0 0 0 0 0 0 0 0 0 0 0 4787500 11546000 9221 1499 8396 78280;78281 62594;62595 62595 2 DSSVEELK Unmodified 905.43419 0.43419164 4425 Q9H6T3 RPAP3 RNA polymerase II-associated protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 22.654 22.896 2 0.023266 24325 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 60.478 25.182 19977000 0 0 0 0 0 5046500 3103500 0 0 0 0 0 0 5115400 6711700 9222 4425 8397 78282;78283;78284;78285 62596 62596 1 DSSVEELKK Unmodified 1033.5292 0.52915466 4425 Q9H6T3 RPAP3 RNA polymerase II-associated protein 3 yes yes 0 0 1 By MS/MS 3 0 1 1 18.564 14.847 2 0.034416 18631 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 91.853 43.292 4321400 0 4321400 0 0 0 0 0 0 0 0 0 0 0 0 0 9223 4425 8398 78286 62597 62597 0 DSTAASRATTLSNAVSSLASTGLSLTK Unmodified 2609.3508 0.35080295 2300 Q13492 PICALM Phosphatidylinositol-binding clathrin assembly protein yes yes 0 0 1 By MS/MS 2 0 1 1 97.048 88.918 3 5.4646E-06 114876 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.885 41.846 8929500 8929500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9224 2300 8399 78287 62598 62598 1 DSTGHVGFIFK Unmodified 1206.6033 0.60332266 168 O00560 SDCBP Syntenin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 3 18 1 1 1 1 1 2 2 1 2 1 2 2 1 1 2 65.552 65.101 2;3 0.001123 74489 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 74.92 46.746 325050000 122040000 0 20717000 6997600 4266300 19567000 14682000 11163000 18454000 13012000 17108000 17242000 10748000 12978000 36067000 9225 168 8400 78288;78289;78290;78291;78292;78293;78294;78295;78296;78297;78298;78299;78300;78301;78302;78303;78304;78305;78306;78307;78308 62599;62600;62601;62602;62603;62604;62605;62606;62607;62608;62609;62610;62611;62612 62600 14 DSTGSLPGSGSTHGTSLK Unmodified 1687.8013 0.80130678 2551 Q15596 NCOA2 Nuclear receptor coactivator 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.06 3.8 5 1 10 2 3 1 1 1 1 1 1 1 1 1 1 1 34.414 32.647 2;3 5.293E-06 36489 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 66.809 51.264 325910000 103870000 100390000 12889000 0 7078100 6977900 9819100 10886000 7617900 0 16112000 17002000 13803000 6819400 12649000 9226 2551 8401 78309;78310;78311;78312;78313;78314;78315;78316;78317;78318;78319;78320;78321;78322;78323;78324 62613;62614;62615;62616;62617;62618;62619;62620;62621 62621 6 DSTLIMQLLR Oxidation (M) 1204.6486 0.64855829 1940;1882;1312;1869;1311;1214;2109 P62258;P61981;P27348;P31946;P31947;P63104;Q04917 YWHAE;YWHAG;YWHAQ;YWHAB;SFN;YWHAZ;YWHAH 14-3-3 protein epsilon;14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed;14-3-3 protein theta;14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein sigma;14-3-3 protein zeta/delta;14-3-3 protein eta no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 1 2 2 2 2 2 2 2 2 88.94 89.007 2 1.0968E-09 103106 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 141.39 127.81 2307300000 0 0 0 33877000 35608000 91018000 32646000 63192000 54394000 172460000 291650000 283120000 74525000 219320000 955470000 9227 1882;1869;1214;1311;1312;1940;2109 8402 78325;78326;78327;78328;78329;78330;78331;78332;78333;78334;78335;78336;78337;78338;78339;78340;78341;78342;78343;78344;78345;78346;78347 62622;62623;62624;62625;62626;62627;62628;62629;62630;62631;62632;62633;62634;62635;62636;62637;62638;62639;62640;62641;62642;62643;62644;62645;62646;62647 62625 1780 21 DSTLIMQLLR Unmodified 1188.6536 0.65364367 1940;1882;1312;1869;1311;1214;2109 P62258;P61981;P27348;P31946;P31947;P63104;Q04917 YWHAE;YWHAG;YWHAQ;YWHAB;SFN;YWHAZ;YWHAH 14-3-3 protein epsilon;14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed;14-3-3 protein theta;14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein sigma;14-3-3 protein zeta/delta;14-3-3 protein eta no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 93.497 93.572 2 3.549E-11 108886 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 159.04 122.64 528450000 0 0 0 5800500 5824800 12789000 6238900 10989000 6049500 21668000 43171000 30342000 6712100 40914000 337960000 9228 1882;1869;1214;1311;1312;1940;2109 8402 78348;78349;78350;78351;78352;78353;78354;78355;78356;78357;78358;78359 62648;62649;62650;62651;62652;62653;62654;62655;62656;62657;62658;62659;62660;62661;62662 62659 15 DSTLIMQLLRDNLTLWTSDTQGDEAEAGEGGEN Unmodified 3578.6319 0.63186477 1940 P63104 YWHAZ 14-3-3 protein zeta/delta yes yes 0 0 1 By MS/MS 2 0 1 1 103.25 95.123 3 2.4891E-41 122273 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.21 85.352 20638000 20638000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9229 1940 8403 78360 62663 62663 1 DSTLIMQLLRDNLTLWTSENQGDEGDAGEGEN Unmodified 3520.59 0.58999996 1311 P31946 YWHAB 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed yes yes 0 0 1 By MS/MS 2 0 1 1 103.04 94.911 3 2.3868E-05 122044 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 35.648 30.693 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9230 1311 8404 78361 62664 62664 1 DSTLTEPVVMALLK Unmodified 1515.8218 0.82183121 2275 Q13362 PPP2R5C Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.12 3.89 3 1 4 3 1 1 1 1 1 96.87 95.039 2;3 3.9285E-14 116107 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.89 97.42 245430000 0 236660000 2074500 0 0 0 0 668560 0 1846800 0 0 0 1178100 3008400 9231 2275 8405 78362;78363;78364;78365;78366;78367;78368;78369 62665;62666;62667;62668;62669 62666 5 DSTLTEPVVMALLK Oxidation (M) 1531.8167 0.81674583 2275 Q13362 PPP2R5C Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform yes yes 0 1 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 92.716 89.183 2 0.0037945 110574 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.78 49.506 56706000 0 54971000 1734700 0 0 0 0 0 0 0 0 0 0 0 0 9232 2275 8405 78370;78371;78372 62670;62671;62672;62673 62670 3707 4 DSTPSSLDSDPLMAMLLK 2 Oxidation (M) 1951.9118 0.91184478 3432 Q8NEY1 NAV1 Neuron navigator 1 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 82.739 82.644 2 0.00081969 95741 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 42.095 35.654 11660000 0 0 0 1748800 2876400 0 0 0 2648500 4386700 0 0 0 0 0 9233 3432 8406 78373;78374;78375;78376 62674 62674 4973;4974 1 DSTPSSLDSDPLMAMLLK Unmodified 1919.922 0.92201554 3432 Q8NEY1 NAV1 Neuron navigator 1 yes yes 0 0 0 By MS/MS 2 0 1 1 100.11 95.395 2 0.0036253 117961 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 48.704 35.276 14605000 0 14605000 0 0 0 0 0 0 0 0 0 0 0 0 0 9234 3432 8406 78377 62675 62675 1 DSTRSRGSDSPAADVEIEYVTEEPEIYEPNFIFFK Unmodified 4036.8854 0.88543692 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 0 2 By MS/MS 2.5 0.5 1 1 2 97.875 92.054 4 1.409E-80 116353 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 118.3 114.69 144970000 144970000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9235 2290 8407 78378;78379 62676;62677 62677 2 DSTSQHDDDNISTTSGFSSR Unmodified 2155.889 0.88901217 1600 P49790 NUP153 Nuclear pore complex protein Nup153 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 36.583 36.365 3 7.1992E-12 39061 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 83.849 75.348 435470000 0 10378000 0 20742000 24979000 29071000 40331000 23852000 28053000 33078000 26089000 55122000 41409000 41337000 61028000 9236 1600 8408 78380;78381;78382;78383;78384;78385;78386;78387;78388;78389;78390;78391;78392 62678;62679;62680;62681;62682;62683;62684;62685;62686;62687;62688;62689;62690 62686 13 DSTSTRLERK Unmodified 1191.6208 0.62076364 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 2 By MS/MS 2 0 1 1 8.5425 4.9039 3 0.040459 8625 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 59.908 46.507 118030000 118030000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9237 3443 8409 78393 62691 62691 1 DSTTSDVIK Unmodified 964.47131 0.47130543 2295 Q13459 MYO9B Unconventional myosin-IXb yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 20.815 21.297 2 0.008867 21023 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.383 39.234 9928400 0 0 0 0 0 0 0 0 0 0 0 0 0 4567200 5361300 9238 2295 8410 78394;78395;78396;78397 62692;62693;62694;62695;62696 62693 5 DSVADPHNLK Unmodified 1094.5356 0.53563702 3855 Q96GK7;Q6P2I3 FAHD2A;FAHD2B Fumarylacetoacetate hydrolase domain-containing protein 2A;Fumarylacetoacetate hydrolase domain-containing protein 2B yes no 0 0 0 By MS/MS By matching By MS/MS 4.67 3.77 2 1 1 1 1 34.72 32.48 2 0.020428 26300 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.86 104.2 94937000 0 86217000 1897000 0 0 0 0 6822600 0 0 0 0 0 0 0 9239 3855 8411 78398;78399;78400 62697;62698 62697 1 DSVAQGTTNVHSSEHAGR Unmodified 1851.846 0.84596556 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 12.711 12.892 3 3.0643E-06 11827 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 71.601 61.68 80857000 0 0 0 0 7037600 7766700 5619900 4840700 4332800 10973000 4089700 9777800 9099400 5611100 11708000 9240 1492 8412 78401;78402;78403;78404;78405;78406;78407;78408;78409;78410;78411 62699;62700;62701;62702;62703;62704;62705;62706 62702 7 DSVASTITGVMDK Unmodified 1322.6388 0.63878147 4020 Q99541 PLIN2 Perilipin-2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 75.146 74.48 2 1.1689E-12 86367 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 127.42 106.55 328240000 0 182320000 0 6664000 10651000 13317000 15790000 0 9072600 15328000 18427000 23591000 12209000 20877000 0 9241 4020 8413 78412;78413;78414;78415;78416;78417;78418;78419;78420;78421;78422;78423 62707;62708;62709;62710;62711;62712;62713;62714;62715;62716 62714 9 DSVASTITGVMDK Oxidation (M) 1338.6337 0.63369609 4020 Q99541 PLIN2 Perilipin-2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 51.985 51.886 2 0.00046692 58729 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 72.2 61.677 17830000 0 0 0 0 6222500 0 5821000 5786600 0 0 0 0 0 0 0 9242 4020 8413 78424;78425;78426;78427 62717;62718;62719;62720 62717 5522 4 DSVEENMLK Oxidation (M) 1079.4805 0.48048991 2411 Q14527 HLTF Helicase-like transcription factor yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 3 2 2 2 2 2 20.659 20.898 2 0.0023276 21003 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 89.752 76.173 718770000 0 0 0 54423000 22133000 57431000 29945000 0 59854000 109010000 78975000 106790000 85634000 60733000 53846000 9243 2411 8414 78428;78429;78430;78431;78432;78433;78434;78435;78436;78437;78438;78439;78440;78441;78442;78443;78444;78445;78446;78447;78448;78449;78450 62721;62722;62723;62724;62725;62726;62727;62728;62729;62730;62731;62732;62733;62734;62735;62736;62737;62738 62734 3958 12 DSVEENMLK Unmodified 1063.4856 0.48557529 2411 Q14527 HLTF Helicase-like transcription factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 42.071 42.222 2 0.0046593 45810 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 119.27 89.199 806180000 0 0 0 44875000 59563000 58050000 62906000 73808000 57688000 82991000 0 121300000 71447000 74422000 99130000 9244 2411 8414 78451;78452;78453;78454;78455;78456;78457;78458;78459;78460;78461 62739;62740;62741;62742;62743;62744 62742 3 DSVMQQNLVYYR Unmodified 1514.7188 0.71876312 3661 Q92791 LEPREL4 Synaptonemal complex protein SC65 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 69.03 69.287 2 0.010935 79549 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.567 37.758 6063100 0 0 0 0 0 0 0 0 0 2526200 0 3536900 0 0 0 9245 3661 8415 78462;78463;78464 62745;62746 62746 2 DSVPGVSPQLLHIK Unmodified 1488.83 0.83002813 5056 Q9UPR0 PLCL2 Inactive phospholipase C-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 80.495 76.856 3 0.00070654 95540 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 57.159 47.371 39153000 0 34651000 4502600 0 0 0 0 0 0 0 0 0 0 0 0 9246 5056 8416 78465;78466 62747;62748 62747 2 DSVPSLQGEK Unmodified 1058.5244 0.52440364 1841 P61244 MAX Protein max yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 33.982 34.27 2 0.046806 37610 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 38.086 10.561 27612000 0 0 0 0 0 3719800 3748300 0 0 4023700 4786500 0 5974200 0 5359000 9247 1841 8417 78467;78468;78469;78470;78471;78472 62749 62749 1 DSVREQDQTLLLK Unmodified 1543.8206 0.82058566 3094 Q7Z460 CLASP1 CLIP-associating protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 52.277 51.505 3 0.0023444 63960 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 67.275 47.437 216270000 0 22936000 0 10635000 10543000 0 18511000 16056000 17755000 18765000 25112000 28982000 0 18822000 28155000 9248 3094 8418 78473;78474;78475;78476;78477;78478;78479;78480;78481;78482;78483;78484 62750;62751;62752 62750 3 DSVTCAGFSHDSTLVATGDMSGLLK Unmodified 2568.1836 0.18360297 2341 Q13685 AAMP Angio-associated migratory cell protein yes yes 0 0 0 By MS/MS 2 0 1 1 89.185 81.054 3 4.6172E-09 105394 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.036 65.585 13046000 13046000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9249 2341 8419 78485 62753 62753 1 DSVVAGFQWATK Unmodified 1307.651 0.65100113 980 P13639 EEF2 Elongation factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 5.09 3.73 5 2 4 3 3 1 1 1 1 1 80.564 78.164 2 2.6115E-05 96784 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.76 116.6 1363500000 155990000 1055500000 60348000 0 0 0 0 0 3051700 0 0 10170000 0 11405000 67050000 9250 980 8420 78486;78487;78488;78489;78490;78491;78492;78493;78494;78495;78496 62754;62755;62756;62757;62758;62759;62760;62761;62762;62763;62764;62765;62766 62754 12 DSVVLSLLK Unmodified 972.58555 0.58554733 311 O43264 ZW10 Centromere/kinetochore protein zw10 homolog yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 84.27 84.388 2 0.0051376 97357 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.452 36.027 36790000 0 0 0 0 0 6511200 0 0 2996200 5627400 0 6206400 3779700 3879000 7790600 9251 311 8421 78497;78498;78499;78500;78501;78502;78503 62767;62768;62769;62770 62769 4 DSVVSLESQK Unmodified 1090.5506 0.55061839 3424 Q8NEF9 SRFBP1 Serum response factor-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 37.159 37.54 2 0.0084833 41924 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 59.931 31.849 33570000 0 0 0 0 0 4628800 0 2942200 0 4852400 4374600 9021600 0 0 7750500 9252 3424 8422 78504;78505;78506;78507;78508;78509 62771;62772;62773;62774 62771 4 DSVWGSGGGQQSVNHLVK Unmodified 1853.902 0.90202388 2696 Q53EL6 PDCD4 Programmed cell death protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.56 3.62 4 1 11 1 3 1 1 1 1 1 1 1 1 1 1 1 1 59.07 57.402 2;3 5.052E-47 74424 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.93 125.72 734930000 227000000 260060000 53982000 9341900 0 16554000 11115000 10472000 8453700 14932000 19961000 22927000 17976000 20918000 41237000 9253 2696 8423 78510;78511;78512;78513;78514;78515;78516;78517;78518;78519;78520;78521;78522;78523;78524;78525 62775;62776;62777;62778;62779;62780;62781;62782;62783;62784;62785;62786;62787;62788;62789;62790 62778 16 DSYDSYATHNE Unmodified 1300.4844 0.48438931 2362 Q14011 CIRBP Cold-inducible RNA-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 27.921 28.019 2 0.022668 29401 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.796 36.83 17234000 0 0 0 0 3008200 3295900 2196200 0 0 2836700 0 0 0 0 5896800 9254 2362 8424 78526;78527;78528;78529;78530 62791 62791 1 DSYESYGNSR Unmodified 1176.4683 0.46834532 1395 P38159;Q96E39 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 20.399 20.565 2 0.039672 21106 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 49.444 39.457 48250000 0 0 0 0 10985000 0 7881500 6997100 0 0 0 9441400 12945000 0 0 9255 1395 8425 78531;78532;78533;78534;78535 62792 62792 1 DSYLILETLPTEYDSR Unmodified 1913.9258 0.92583859 1066 P17980 PSMC3 26S protease regulatory subunit 6A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 2 1 1 1 1 90.569 90.641 2 1.0075E-27 105227 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 134.75 128.52 121560000 0 0 0 2022400 5077600 9330600 1812800 3458900 2543200 25447000 21782000 21628000 1774000 3508100 23174000 9256 1066 8426 78536;78537;78538;78539;78540;78541;78542;78543;78544;78545;78546;78547;78548 62793;62794;62795;62796;62797;62798;62799;62800;62801;62802;62803;62804;62805;62806;62807;62808;62809;62810;62811;62812;62813;62814;62815;62816 62816 24 DSYLILETLPTEYDSRVK Unmodified 2141.0892 0.089215523 1066 P17980 PSMC3 26S protease regulatory subunit 6A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 3 1 1 91.844 86.411 2;3 6.6154E-09 109687 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 128.54 116.56 146400000 79772000 61420000 5205500 0 0 0 0 0 0 0 0 0 0 0 0 9257 1066 8427 78549;78550;78551;78552;78553 62817;62818;62819;62820;62821 62821 5 DSYVGDEAQSK Unmodified 1197.515 0.51496116 1951;1815;1958 P60709;P63261;P68032;P63267;P68133;P62736 ACTB;ACTG1;ACTC1;ACTG2;ACTA1;ACTA2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, aortic smooth muscle no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.34 3.82 5 13 3 43 9 10 2 4 4 2 4 4 3 4 4 3 4 4 3 22.602 22.194 1;2 1.0485E-95 17625 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 261.65 215.22 48431000000 1845400000 2285800000 80877000 4510800000 4501900000 78465000 4973300000 3980800000 3879200000 4474900000 5756200000 141930000 6210900000 5541400000 169600000 9258 1815;1951;1958 8428 78554;78555;78556;78557;78558;78559;78560;78561;78562;78563;78564;78565;78566;78567;78568;78569;78570;78571;78572;78573;78574;78575;78576;78577;78578;78579;78580;78581;78582;78583;78584;78585;78586;78587;78588;78589;78590;78591;78592;78593;78594;78595;78596;78597;78598;78599;78600;78601;78602;78603;78604;78605;78606;78607;78608;78609;78610;78611;78612;78613;78614;78615;78616;78617 62822;62823;62824;62825;62826;62827;62828;62829;62830;62831;62832;62833;62834;62835;62836;62837;62838;62839;62840;62841;62842;62843;62844;62845;62846;62847;62848;62849;62850;62851;62852;62853;62854;62855;62856;62857;62858;62859;62860;62861;62862;62863;62864;62865;62866;62867;62868;62869;62870;62871;62872;62873;62874;62875;62876;62877;62878;62879;62880;62881;62882;62883;62884;62885;62886;62887;62888;62889;62890;62891;62892;62893 62884 69 DSYVGDEAQSKR Unmodified 1353.6161 0.61607219 1951;1815;1958 P60709;P63261;P68032;P63267;P68133;P62736 ACTB;ACTG1;ACTC1;ACTG2;ACTA1;ACTA2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, aortic smooth muscle no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 25 3 2 2 2 2 2 2 2 2 2 2 2 15.134 15.292 2;3 2.0761E-13 14753 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 152.54 137.39 2528500000 0 0 0 186260000 149340000 57766000 174960000 66240000 68771000 146600000 396970000 536390000 363870000 171280000 210080000 9259 1815;1951;1958 8429 78618;78619;78620;78621;78622;78623;78624;78625;78626;78627;78628;78629;78630;78631;78632;78633;78634;78635;78636;78637;78638;78639;78640;78641;78642 62894;62895;62896;62897;62898;62899;62900;62901;62902;62903;62904;62905;62906;62907;62908;62909;62910;62911;62912;62913;62914;62915 62906 16 DTAASGYGTQNIRLSRDAVK Unmodified 2122.0767 0.076693777 5133 Q9Y314 NOSIP Nitric oxide synthase-interacting protein yes yes 0 0 2 By MS/MS 2 0 1 1 56.017 47.869 3 0.034562 65564 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.968 21.706 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9260 5133 8430 78643 62916 62916 1 DTAAWTVGR Unmodified 975.47739 0.47739386 2457 Q14974 KPNB1 Importin subunit beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 42.728 42.819 2 0.0030483 48611 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 91.318 72.627 209920000 0 0 0 12020000 10410000 22912000 12524000 13435000 8149000 22875000 0 0 21826000 21964000 63804000 9261 2457 8431 78644;78645;78646;78647;78648;78649;78650;78651;78652;78653 62917;62918;62919;62920;62921;62922;62923;62924;62925;62926 62925 9 DTADVVHPFFLAQK Unmodified 1586.8093 0.80929269 4686 Q9NVX0 HAUS2 HAUS augmin-like complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80.854 80.389 3 0.00044628 100626 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.952 62.232 139720000 0 40351000 8915000 2305600 2457400 9589000 3934200 6381000 6421300 9221900 7968400 8541200 6876600 11191000 15568000 9262 4686 8432 78654;78655;78656;78657;78658;78659;78660;78661;78662;78663;78664;78665;78666;78667 62927;62928;62929;62930;62931;62932;62933;62934;62935;62936 62928 10 DTAEGVSQELISAGLVDGR Unmodified 1915.9487 0.9486993 684 O95747 OXSR1 Serine/threonine-protein kinase OSR1 yes yes 0 0 0 By MS/MS 10 0 1 1 85.316 85.36 2 0.0057912 98918 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 42.789 28.227 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9263 684 8433 78668 62937 62937 1 DTAHSAALLAQLK Unmodified 1337.7303 0.73031409 3164 Q86V97;Q8WVZ9 KBTBD6;KBTBD7 Kelch repeat and BTB domain-containing protein 6;Kelch repeat and BTB domain-containing protein 7 yes no 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 5 2 2 1 73.575 67.39 2;3 0.00062876 88048 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.091 47.704 167850000 80097000 75792000 11960000 0 0 0 0 0 0 0 0 0 0 0 0 9264 3164 8434 78669;78670;78671;78672;78673 62938;62939;62940;62941;62942 62940 4 DTALETALNAK Unmodified 1145.5928 0.59281755 1656 P51532 SMARCA4 Transcription activator BRG1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 57.503 57.622 2 0.00053235 65515 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 96.331 42.363 69400000 0 0 0 0 10419000 0 10379000 9520500 0 10747000 0 0 0 8945600 19389000 9265 1656 8435 78674;78675;78676;78677;78678;78679;78680;78681;78682 62943;62944;62945;62946;62947;62948;62949;62950;62951 62945 8 DTALLLDPNIYR Unmodified 1402.7456 0.7456298 3000 Q6ZN18 AEBP2 Zinc finger protein AEBP2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 84.959 85.014 2 2.6275E-05 98470 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 94.692 48.534 58946000 0 0 0 3532200 3862100 4755100 4736100 0 3191700 4727000 6799400 6481900 6017300 5715400 9128100 9266 3000 8436 78683;78684;78685;78686;78687;78688;78689;78690;78691;78692;78693;78694 62952;62953;62954;62955;62956;62957;62958;62959;62960;62961;62962;62963;62964 62954 11 DTALTIAADK Unmodified 1017.5342 0.53424004 472;3250 Q8IWZ3;O75179 ANKHD1;ANKRD17 Ankyrin repeat and KH domain-containing protein 1;Ankyrin repeat domain-containing protein 17 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 43.687 43.887 2 0.0008873 49179 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 117.89 83.066 293890000 0 0 0 16765000 0 0 24610000 24107000 19605000 36534000 42690000 53945000 42664000 32968000 0 9267 3250;472 8437 78695;78696;78697;78698;78699;78700;78701;78702;78703;78704 62965;62966;62967;62968;62969;62970;62971 62966 5 DTARGQNLLQTQDHAK Unmodified 1794.8973 0.89727285 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 32.593 27.86 3 0.00065823 39198 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.339 45.246 117040000 109410000 0 7625100 0 0 0 0 0 0 0 0 0 0 0 0 9268 1492 8438 78705;78706 62972;62973;62974;62975 62973 4 DTATAERACNAIEDAQSTRQQQK Unmodified 2591.1994 0.19940446 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 2 By MS/MS 2 0 1 1 47.934 44.054 3 0.021495 55535 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 34.914 27.468 3218200 0 0 3218200 0 0 0 0 0 0 0 0 0 0 0 0 9269 3023 8439 78707 62976;62977 62976 2 DTAYPETNDAIPMISK Oxidation (M) 1780.8189 0.81893068 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 2 1 1 66.287 66.302 2 0.0018708 76002 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 46.592 34.379 20469000 0 0 0 0 2672800 6133500 0 2436700 0 3611800 5613800 0 0 0 0 9270 5071 8440 78708;78709;78710;78711;78712;78713;78714;78715 62978;62979;62980;62981;62982 62978 6441 5 DTAYPETNDAIPMISK Unmodified 1764.824 0.82401605 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 75.324 75.373 2 0.00063938 87016 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 61.11 51.922 63515000 0 0 0 2596000 2707700 5162300 3719900 4268100 0 6438800 6282800 7515700 4051800 6351700 14420000 9271 5071 8440 78716;78717;78718;78719;78720;78721;78722;78723;78724;78725;78726 62983;62984;62985;62986;62987;62988;62989 62989 7 DTCNSSLASLR Unmodified 1222.5612 0.56119985 1973 P78337;Q99697 PITX1;PITX2 Pituitary homeobox 1;Pituitary homeobox 2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.569 41.747 2 0.0033079 46504 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 81.525 63.263 87777000 0 0 0 3719700 3738300 4802000 6123200 6380900 4989600 8559300 12543000 10538000 8923000 6640800 10819000 9272 1973 8441 78727;78728;78729;78730;78731;78732;78733;78734;78735;78736;78737;78738 62990;62991;62992;62993;62994;62995;62996;62997 62991 8 DTDDIESPK Unmodified 1018.4455 0.44548461 5054 Q9UPQ0 LIMCH1 LIM and calponin homology domains-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 2 1 1 17.445 17.863 2 0.008867 17258 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.383 56.614 19366000 0 0 0 0 0 0 0 0 0 0 0 0 5139200 0 14226000 9273 5054 8442 78739;78740;78741;78742;78743;78744;78745;78746;78747 62998;62999;63000;63001;63002;63003;63004;63005 62999 8 DTDDVPMILVGNK Oxidation (M) 1431.6915 0.69154532 1840 P61224;A6NIZ1 RAP1B Ras-related protein Rap-1b;Ras-related protein Rap-1b-like protein yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 73.387 71.797 2 2.0361E-10 88244 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.71 111.07 92019000 8525900 49656000 0 3398900 0 0 4217500 0 0 6130600 7118500 11236000 1735800 0 0 9274 1840 8443 78748;78749;78750;78751;78752;78753;78754;78755;78756;78757 63006;63007;63008;63009;63010;63011;63012;63013;63014 63008 2988 9 DTDDVPMILVGNK Unmodified 1415.6966 0.6966307 1840 P61224;A6NIZ1 RAP1B Ras-related protein Rap-1b;Ras-related protein Rap-1b-like protein yes no 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 83.74 77.314 2 8.6062E-10 97760 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.97 103.82 89182000 8203400 80979000 0 0 0 0 0 0 0 0 0 0 0 0 0 9275 1840 8443 78758;78759 63015;63016 63015 2 DTDEADLVLAK Unmodified 1188.5874 0.58739782 1487 P45973 CBX5 Chromobox protein homolog 5 yes yes 0 0 0 By MS/MS 2 0 1 1 62.257 54.001 2 0.029361 72972 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.317 41.806 10211000 10211000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9276 1487 8444 78760 63017 63017 1 DTDFEHR Unmodified 918.38316 0.38315913 1063 P17858 PFKL ATP-dependent 6-phosphofructokinase, liver type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 10.394 10.534 2 0.023899 9163 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 94.262 85.021 98066000 0 0 0 6793800 5550500 9820500 10222000 9482300 8233800 7606400 7749800 8008300 7707900 6137400 10753000 9277 1063 8445 78761;78762;78763;78764;78765;78766;78767;78768;78769;78770;78771;78772 63018;63019;63020;63021 63021 4 DTDIQGFLK Unmodified 1035.5237 0.52367535 3311 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 71.541 70.278 2 0.0052558 80620 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 78.77 65.122 569040000 13287000 261670000 0 15578000 13434000 20928000 20595000 28200000 18355000 25197000 27670000 30712000 30154000 27060000 36201000 9278 3311 8446 78773;78774;78775;78776;78777;78778;78779;78780;78781;78782;78783;78784;78785;78786;78787;78788 63022;63023;63024;63025;63026;63027;63028;63029;63030;63031;63032;63033;63034;63035 63027 14 DTDIVDEAIYYFK Unmodified 1590.7454 0.74535503 258 O15145 ARPC3 Actin-related protein 2/3 complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.5 0.5 2 2 1 2 1 97.043 93.535 2 6.5837E-23 115022 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 152.54 141.78 295140000 4972700 282750000 7408900 0 0 0 0 0 0 0 0 0 0 0 0 9279 258 8447 78789;78790;78791;78792 63036;63037;63038;63039;63040 63036 5 DTDNEEEIREAFR Unmodified 1622.7172 0.7172428 1218 P27482 CALML3 Calmodulin-like protein 3 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 55.154 54.92 3 0.0034415 62993 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 40.552 28.637 36762000 0 0 0 21774000 3402100 0 3742400 7843300 0 0 0 0 0 0 0 9280 1218 8448 78793;78794;78795;78796 63041 63041 1 DTDSEEEIR Unmodified 1092.4571 0.45711193 912 P0DP25;P0DP24;P0DP23 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 16.062 16.242 2 0.0032251 14989 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 129.47 102.5 44068000 0 0 0 2107100 1958400 1471100 2148900 2096900 1468500 0 8248500 8796600 2171600 4696500 8903800 9281 912 8449 78797;78798;78799;78800;78801;78802;78803;78804;78805;78806;78807 63042;63043;63044;63045;63046;63047 63042 6 DTDSEEEIREAFR Unmodified 1595.7063 0.70634376 912 P0DP25;P0DP24;P0DP23 yes no 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.81 2.84 4 23 1 2 1 2 2 2 2 2 2 2 2 2 2 2 1 59.381 59.247 2;3 6.2691E-10 67152 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 140.07 98.074 1362200000 2044300 25364000 266210 101210000 38003000 48374000 42499000 91094000 44210000 60974000 183600000 264230000 56101000 99006000 305220000 9282 912 8450 78808;78809;78810;78811;78812;78813;78814;78815;78816;78817;78818;78819;78820;78821;78822;78823;78824;78825;78826;78827;78828;78829;78830;78831;78832;78833;78834 63048;63049;63050;63051;63052;63053;63054;63055;63056;63057;63058;63059;63060;63061;63062;63063;63064;63065;63066;63067;63068 63064 20 DTDSEEEIREAFRVFDK Unmodified 2084.9651 0.96507764 912 P0DP25;P0DP24;P0DP23 yes no 0 0 2 By MS/MS By MS/MS By MS/MS 2.1 0.526 2 15 4 15 4 2 93.599 88.793 2;3;4 3.1868E-58 87649 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 159.88 152.04 13042000000 12059000000 942810000 39597000 0 0 0 0 0 0 0 0 0 0 0 0 9283 912 8451 78835;78836;78837;78838;78839;78840;78841;78842;78843;78844;78845;78846;78847;78848;78849;78850;78851;78852;78853;78854;78855 63069;63070;63071;63072;63073;63074;63075;63076;63077;63078;63079;63080;63081;63082;63083;63084;63085;63086;63087;63088;63089;63090;63091;63092;63093;63094;63095;63096;63097;63098;63099;63100;63101;63102 63078 30 DTDSINLYK Unmodified 1067.5135 0.5135046 237 O14980 XPO1 Exportin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.483 46.649 2 0.0032404 52504 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 129.68 87.791 358170000 0 0 0 8848300 11073000 42783000 17835000 12990000 17197000 41018000 41480000 46600000 23877000 31363000 63102000 9284 237 8452 78856;78857;78858;78859;78860;78861;78862;78863;78864;78865;78866;78867 63103;63104;63105;63106;63107;63108;63109;63110;63111;63112;63113;63114;63115 63112 13 DTEAGETFSSVQANLSK Unmodified 1782.8272 0.82718718 1349 P35251 RFC1 Replication factor C subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 68.378 67.982 2 1.0558E-28 78381 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 144.47 132.94 130580000 0 29562000 0 0 4642000 10170000 8322900 6738100 7067700 10454000 11703000 17337000 0 7328700 17256000 9285 1349 8453 78868;78869;78870;78871;78872;78873;78874;78875;78876;78877;78878 63116;63117;63118;63119;63120;63121;63122;63123;63124;63125 63125 10 DTEAPTAPQNSQLTWK Unmodified 1785.8533 0.85334235 2225 Q13033 STRN3 Striatin-3 yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 59.961 60.233 2 3.8586E-06 68176 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.171 78.408 23136000 0 0 0 0 0 0 2269800 0 2350600 0 3564900 0 3329700 3040100 8580800 9286 2225 8454 78879;78880;78881;78882;78883;78884 63126;63127;63128 63126 3 DTEAVMAFLEAK Unmodified 1323.6381 0.63805318 2759 Q5SW79 CEP170 Centrosomal protein of 170 kDa yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 89.335 88.44 2 0.004791 102495 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.404 46.173 29262000 0 20379000 0 0 0 1313300 0 0 0 1651700 0 2585900 0 0 3332200 9287 2759 8455 78885;78886;78887;78888;78889 63129;63130;63131;63132 63132 4 DTEAVMAFLEAK Oxidation (M) 1339.633 0.63296781 2759 Q5SW79 CEP170 Centrosomal protein of 170 kDa yes yes 0 1 0 By matching By MS/MS By matching By matching By MS/MS 10 0 5 1 1 1 1 1 78.391 78.509 2 0.011769 90513 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 41.796 29.006 12715000 0 0 0 0 0 2852200 1517500 0 1438400 0 0 2569200 4337300 0 0 9288 2759 8455 78890;78891;78892;78893;78894 63133 63133 4385 1 DTEDVPMILVGNK Unmodified 1429.7123 0.71228076 1914 P62834 RAP1A Ras-related protein Rap-1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.285 80.344 2 0.0016975 92042 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 79.148 74.697 65619000 0 0 0 3060500 2768300 4202800 3068700 5139000 3041500 7530100 7988100 5461800 4009600 8339800 11009000 9289 1914 8456 78895;78896;78897;78898;78899;78900;78901;78902;78903;78904;78905;78906 63134;63135;63136;63137;63138;63139;63140;63141;63142 63139 8 DTEEEDFHVDQVTTVK Unmodified 1890.8483 0.84831655 739 P01009 SERPINA1 Alpha-1-antitrypsin;Short peptide from AAT yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 59.091 58.838 3 0.0057301 67783 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 37.583 32.869 13332000 0 0 0 5961500 0 0 0 7370600 0 0 0 0 0 0 0 9290 739 8457 78907;78908 63143 63143 1 DTEEPLPVK Unmodified 1026.5233 0.523341 1074 P18583 SON Protein SON yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 41.626 41.759 2 0.02254 45389 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 51.43 25.207 32117000 0 0 0 2197900 1817700 0 2956800 2484200 2119200 4413600 3259800 0 5142300 4330700 3395300 9291 1074 8458 78909;78910;78911;78912;78913;78914;78915;78916;78917;78918 63144;63145 63145 2 DTEEVELK Unmodified 961.46041 0.4604064 4887 Q9UGP8 SEC63 Translocation protein SEC63 homolog yes yes 0 0 0 By MS/MS 10 0 1 1 29.083 28.804 2 0.033141 31389 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 53.891 26.366 4875700 0 0 0 4875700 0 0 0 0 0 0 0 0 0 0 0 9292 4887 8459 78919 63146 63146 1 DTELAEELLQWFLQEEK Unmodified 2120.0314 0.031366293 2040 Q00610 CLTC Clathrin heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.44 0.497 5 4 3 5 1 104.64 100.32 2;3 0 124551 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 414.29 390.61 387280000 265490000 117460000 4332700 0 0 0 0 0 0 0 0 0 0 0 0 9293 2040 8460 78920;78921;78922;78923;78924;78925;78926;78927;78928 63147;63148;63149;63150;63151;63152;63153;63154;63155;63156;63157;63158;63159 63157 13 DTELLDLRETIDFLK Unmodified 1819.9567 0.95674479 3432 Q8NEY1 NAV1 Neuron navigator 1 yes yes 0 0 1 By MS/MS 2 0 1 1 98.312 90.181 3 0.00036129 116368 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.98 60.54 23389000 23389000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9294 3432 8461 78929 63160 63160 1 DTEMLATGAQDGK Unmodified 1335.5976 0.59764493 2658 Q2TAY7 SMU1 WD40 repeat-containing protein SMU1;WD40 repeat-containing protein SMU1, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 33.284 33.584 2 1.8712E-13 35744 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 140.49 119.75 22914000 0 0 0 0 0 2681900 0 0 0 5268400 0 0 6030600 0 8932700 9295 2658 8462 78930;78931;78932;78933 63161;63162;63163 63162 3 DTEMLATGAQDGK Oxidation (M) 1351.5926 0.59255956 2658 Q2TAY7 SMU1 WD40 repeat-containing protein SMU1;WD40 repeat-containing protein SMU1, N-terminally processed yes yes 0 1 0 By MS/MS 10 0 1 1 21.774 22.426 2 0.036589 22450 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.958 33.434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9296 2658 8462 78934 63164 63164 1 DTEPGPASGGTLGPSGEEAPRPR Unmodified 2234.0564 0.056352265 3035 Q765P7 MTSS1L MTSS1-like protein yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 44.645 45.186 3 0.00017081 49702 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.583 26.923 15181000 0 0 0 0 0 0 0 0 0 0 0 0 5285700 0 9894900 9297 3035 8463 78935;78936 63165 63165 1 DTEPLIQTAK Unmodified 1114.587 0.58700389 1548 P48643 CCT5 T-complex protein 1 subunit epsilon yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.39 3.71 1 3 2 12 3 2 1 1 1 1 1 1 1 1 1 1 1 1 1 45.047 44.023 2 0.00040335 93425 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 117.81 93.656 2351500000 266170000 280900000 12254000 76735000 61060000 192760000 114910000 77972000 74516000 189290000 202960000 176840000 140990000 172710000 311440000 9298 1548 8464 78937;78938;78939;78940;78941;78942;78943;78944;78945;78946;78947;78948;78949;78950;78951;78952;78953;78954 63166;63167;63168;63169;63170;63171;63172;63173;63174;63175;63176;63177;63178;63179;63180;63181;63182;63183 63173 15 DTEPTNFK Unmodified 950.43453 0.434526 2467 Q15003 NCAPH Condensin complex subunit 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching 9.31 2.4 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 28.558 28.818 2 0.0044499 23210 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 110.63 79.054 247670000 0 12098000 0 10440000 9621700 22324000 15727000 14824000 14698000 22961000 24297000 26171000 21811000 22068000 30625000 9299 2467 8465 78955;78956;78957;78958;78959;78960;78961;78962;78963;78964;78965;78966;78967 63184;63185;63186;63187;63188;63189;63190;63191;63192;63193 63184 8 DTEVAAPWTEETVK Unmodified 1574.7464 0.74641766 3663 Q92797 SYMPK Symplekin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 69.754 69.327 2 6.0548E-30 85543 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145.28 121.19 85483000 0 29117000 0 2576300 3301900 5335000 4070600 5189400 3085800 7111200 5874100 6381500 6312000 7127700 0 9300 3663 8466 78968;78969;78970;78971;78972;78973;78974;78975;78976;78977;78978;78979 63194;63195;63196;63197;63198;63199;63200;63201;63202;63203;63204;63205 63197 12 DTEVETLK Unmodified 933.46549 0.46549177 4459 Q9H900 ZWILCH Protein zwilch homolog yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 25.925 26.027 2 0.025458 26286 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.679 28.454 37602000 0 0 0 0 3086800 5798100 4826800 0 3709300 8625600 0 0 0 0 11556000 9301 4459 8467 78980;78981;78982;78983;78984;78985 63206 63206 1 DTEVLFCFEQFDELTLLHLREFDK Unmodified 3043.4637 0.46372422 2210 Q12931 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 0 0 1 By MS/MS 2.33 0.471 2 1 3 101.14 94.536 3;4 5.6162E-97 120274 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 149.73 143.29 39650000 39650000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9302 2210 8468 78986;78987;78988 63207;63208;63209;63210 63209 4 DTFEHDPSESIDEFNK Unmodified 1908.8014 0.80136636 4742 Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.29 2.21 1 1 19 2 1 1 2 1 1 1 2 2 2 2 2 2 61.678 61.32 2;3 1.5981E-16 76246 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.43 114.31 401810000 0 105920000 0 12382000 14597000 27129000 12762000 12456000 14153000 29469000 32890000 32745000 32225000 32910000 42175000 9303 4742 8469 78989;78990;78991;78992;78993;78994;78995;78996;78997;78998;78999;79000;79001;79002;79003;79004;79005;79006;79007;79008;79009 63211;63212;63213;63214;63215;63216;63217;63218;63219;63220;63221;63222;63223;63224;63225;63226;63227;63228;63229 63215 14 DTFNGNLPFLFK Unmodified 1411.7136 0.71360139 1338 P34949 MPI Mannose-6-phosphate isomerase yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 96.247 92.615 2 8.9576E-07 114475 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.86 92.279 46099000 0 45720000 379240 0 0 0 0 0 0 0 0 0 0 0 0 9304 1338 8470 79010;79011 63230 63230 1 DTGDIFCTR Unmodified 1083.4655 0.46550855 2160 Q08554 DSC1 Desmocollin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 49.548 49.686 2 0.000169 56820 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 149.65 104.96 307580000 0 0 0 97610000 0 40732000 0 35318000 0 43627000 0 47500000 42793000 0 0 9305 2160 8471 79012;79013;79014;79015;79016;79017;79018;79019;79020 63231;63232;63233;63234;63235;63236;63237;63238;63239;63240;63241;63242;63243 63239 13 DTGDTRESSSIYISK Unmodified 1657.7795 0.7795087 425 O60701 UGDH UDP-glucose 6-dehydrogenase yes yes 0 0 1 By MS/MS By MS/MS By matching 2.33 0.471 4 2 1 4 1 38.209 33.333 2;3 0.0099308 41903 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 44.196 33.562 256300000 16772000 234490000 5033700 0 0 0 0 0 0 0 0 0 0 0 0 9306 425 8472 79021;79022;79023;79024;79025;79026 63244;63245;63246 63245 2 DTGELVALK Unmodified 944.51786 0.51786169 4752 Q9NYV4 CDK12 Cyclin-dependent kinase 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 53.587 52.745 2 0.020914 60407 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 52.716 23.567 483610000 0 327940000 3094600 9139300 7668200 22408000 12365000 8386600 21382000 0 0 0 19392000 20771000 31066000 9307 4752 8473 79027;79028;79029;79030;79031;79032;79033;79034;79035;79036;79037 63247;63248 63248 2 DTGGDGQDSLYK Unmodified 1254.5364 0.53642488 5171 Q9Y3P9 RABGAP1 Rab GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 23.91 24.285 2 0.0053668 24673 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.5 44.529 29489000 0 0 0 0 0 0 0 2784400 2261700 3266200 4671500 4546100 0 3221700 8737400 9308 5171 8474 79038;79039;79040;79041;79042;79043;79044 63249;63250;63251 63249 3 DTGLAFFDDCIEK Unmodified 1529.6708 0.67080988 2830 Q5VZ89 DENND4C DENN domain-containing protein 4C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 86.036 85.723 2 1.2902E-13 104986 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.22 96.509 88015000 0 30300000 0 1906100 2808800 4975300 3465500 5504100 3134700 6157400 4006400 6760300 3857800 4267600 10872000 9309 2830 8475 79045;79046;79047;79048;79049;79050;79051;79052;79053;79054;79055;79056;79057 63252;63253;63254;63255;63256;63257;63258;63259;63260;63261;63262;63263;63264;63265;63266 63256 15 DTGNFVIGQILSDQSR Unmodified 1748.8693 0.86932676 895 P09884 POLA1 DNA polymerase alpha catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 88.847 88.955 2 3.9299E-05 103091 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 77.078 61.539 27466000 0 0 0 0 963390 2653500 1271200 2092500 1528800 4534500 2364700 3054100 1641700 2029600 5331800 9310 895 8476 79058;79059;79060;79061;79062;79063;79064;79065;79066;79067;79068 63267;63268;63269;63270;63271;63272;63273;63274;63275;63276;63277;63278;63279;63280;63281;63282 63267 16 DTGNIGQER Unmodified 988.45739 0.4573867 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 10.72 10.854 2 0.0060658 9859 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 76.064 39.089 26792000 0 0 0 1788300 0 4345300 3437900 1578700 0 2627000 0 5003800 0 2788300 5223100 9311 2047 8477 79069;79070;79071;79072;79073;79074;79075;79076 63283;63284;63285;63286;63287 63283 5 DTHDQLSEPSEVR Unmodified 1511.6852 0.68521439 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 1 2 1 31.154 31.343 2;3 3.4333E-05 34212 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 88.163 82.129 215730000 0 0 0 12376000 13375000 21703000 15908000 14838000 12940000 15358000 18471000 40093000 17211000 13195000 20261000 9312 2501 8478 79077;79078;79079;79080;79081;79082;79083;79084;79085;79086;79087;79088;79089 63288;63289;63290;63291;63292;63293;63294;63295;63296;63297;63298;63299;63300;63301;63302;63303 63296 15 DTHEDHDTSTENTDESNHDPQFEPIVSLPEQEIK Unmodified 3932.7097 0.7096574 1480 P43487 RANBP1 Ran-specific GTPase-activating protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.4 0.49 6 4 4 4 2 80.959 77.291 4;5 9.9388E-22 97889 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.708 68.122 525940000 55696000 197190000 273050000 0 0 0 0 0 0 0 0 0 0 0 0 9313 1480 8479 79090;79091;79092;79093;79094;79095;79096;79097;79098;79099 63304;63305;63306;63307;63308;63309 63304 5 DTHPRGYGNRQNMG Unmodified 1601.7117 0.71172068 1971 P78318 IGBP1 Immunoglobulin-binding protein 1 yes yes 0 0 2 By MS/MS 2 0 1 1 14.756 10.708 3 0.020382 16009 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.79 26.961 9906300 9906300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9314 1971 8480 79100 63310 63310 1 DTHPSVVETDGHAR Unmodified 1519.7015 0.70153315 2186 Q12774 ARHGEF5 Rho guanine nucleotide exchange factor 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.749 16.928 3 0.0063313 15473 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.624 27.644 40712000 0 0 0 2008200 2283100 3231600 3054600 2218700 2220400 3809400 3339800 4898100 4498600 3715900 5433700 9315 2186 8481 79101;79102;79103;79104;79105;79106;79107;79108;79109;79110;79111;79112 63311;63312;63313;63314;63315 63312 5 DTIARALPFWNEEIVPQIK Unmodified 2239.2001 0.20010338 1077 P18669;P15259;Q8N0Y7 PGAM1;PGAM2;PGAM4 Phosphoglycerate mutase 1;Phosphoglycerate mutase 2;Probable phosphoglycerate mutase 4 yes no 0 0 1 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 97.206 92.781 3 9.1107E-65 115728 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 113.47 104.87 87419000 29337000 56927000 1155700 0 0 0 0 0 0 0 0 0 0 0 0 9316 1077 8482 79113;79114;79115;79116;79117 63316;63317;63318;63319;63320 63320 5 DTICNQDER Unmodified 1149.4721 0.47205049 5008 Q9ULV4 CORO1C Coronin-1C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 10.5 10.641 2 0.0030625 8676 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.429 82.264 86952000 0 0 0 5871100 2259000 6941700 4534500 2771500 5368100 6207800 7662000 10949000 5090000 8811300 20486000 9317 5008 8483 79118;79119;79120;79121;79122;79123;79124;79125;79126;79127;79128;79129 63321;63322;63323;63324;63325;63326;63327;63328;63329;63330;63331;63332 63324 12 DTICNQDERISK Unmodified 1477.6831 0.6831059 5008 Q9ULV4 CORO1C Coronin-1C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 3 3 1 25.555 21.101 2;3 0.0014689 28192 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.247 83.932 296070000 27715000 262000000 6361500 0 0 0 0 0 0 0 0 0 0 0 0 9318 5008 8484 79130;79131;79132;79133;79134;79135;79136 63333;63334;63335;63336 63334 3 DTIIDVVGAPLTPNSR Unmodified 1666.889 0.88899957 4550 Q9NPF5 DMAP1 DNA methyltransferase 1-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 85 85.066 2 1.8078E-23 98703 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 141.73 131.77 159080000 0 0 0 8174100 12389000 12941000 14673000 9775200 11213000 21104000 14894000 20345000 10199000 8365800 15009000 9319 4550 8485 79137;79138;79139;79140;79141;79142;79143;79144;79145;79146;79147;79148 63337;63338;63339;63340;63341;63342;63343;63344;63345;63346;63347;63348;63349 63347 13 DTIIDVVGAPLTPNSRK Unmodified 1794.984 0.98396259 4550 Q9NPF5 DMAP1 DNA methyltransferase 1-associated protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.68 1.57 1 24 1 2 2 2 2 2 2 2 2 2 2 2 2 80.195 79.926 2;3 3.0972E-25 92594 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 105.31 91.889 304210000 7277400 0 0 14054000 13574000 23408000 21483000 22199000 21772000 32393000 27090000 38071000 20075000 17236000 45579000 9320 4550 8486 79149;79150;79151;79152;79153;79154;79155;79156;79157;79158;79159;79160;79161;79162;79163;79164;79165;79166;79167;79168;79169;79170;79171;79172;79173 63350;63351;63352;63353;63354;63355;63356;63357;63358;63359;63360;63361;63362;63363;63364;63365;63366 63364 12 DTILHRDEGQGAVTDK Unmodified 1753.8595 0.85949036 5314 yes yes 0 0 1 By MS/MS 2 0 2 2 91.217 83.087 3 0.0004432 107747 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.414 31.449 + 41704000 41704000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9321 5314 8487 79174;79175 63367;63368 63367 1 DTILQLNLK Unmodified 1056.6179 0.61791009 1257 P29992;P50148 GNA11;GNAQ Guanine nucleotide-binding protein subunit alpha-11;Guanine nucleotide-binding protein G(q) subunit alpha yes no 0 0 0 By MS/MS 2 0 1 1 83.006 78.301 2 0.0076054 97436 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.418 61.717 9410200 0 9410200 0 0 0 0 0 0 0 0 0 0 0 0 0 9322 1257 8488 79176 63369 63369 1 DTILQTVDLVSQETGEK Unmodified 1874.9473 0.94730231 4365 Q9H2G2 SLK STE20-like serine/threonine-protein kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.88 3.49 6 1 19 2 3 2 1 2 2 1 1 2 2 2 2 2 2 89.478 88.246 2;3 1.0049E-249 109185 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 263.89 185.2 1169500000 31163000 1031700000 10412000 0 2188000 7141500 3983800 2914500 2893600 17023000 10325000 14354000 4334700 7329200 23701000 9323 4365 8489 79177;79178;79179;79180;79181;79182;79183;79184;79185;79186;79187;79188;79189;79190;79191;79192;79193;79194;79195;79196;79197;79198;79199;79200;79201;79202 63370;63371;63372;63373;63374;63375;63376;63377;63378;63379;63380;63381;63382;63383;63384;63385;63386;63387 63372 16 DTIQHQQGEAVWVSEGK Unmodified 1910.9123 0.91225421 4867 Q9UDY2 TJP2 Tight junction protein ZO-2 yes yes 0 0 0 By MS/MS 3 0 1 1 53.893 49.004 3 0.0015625 60521 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 39.657 29.023 6036800 0 6036800 0 0 0 0 0 0 0 0 0 0 0 0 0 9324 4867 8490 79203 63388 63388 1 DTITSVVDGYCATLEENINSALDIK Unmodified 2740.3113 0.3113059 5047 Q9UP83 COG5 Conserved oligomeric Golgi complex subunit 5 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 99.933 96.417 3 6.2708E-26 118511 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.078 92.415 27215000 0 25620000 1595000 0 0 0 0 0 0 0 0 0 0 0 0 9325 5047 8491 79204;79205;79206 63389;63390;63391;63392 63389 4 DTIVENIQK Unmodified 1058.5608 0.56078914 895 P09884 POLA1 DNA polymerase alpha catalytic subunit yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 41.193 41.387 2 0.022838 46073 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 89.752 33.205 35157000 0 0 0 0 0 7616800 0 6956300 5892900 6548400 8142400 0 0 0 0 9326 895 8492 79207;79208;79209;79210;79211 63393;63394 63394 0 DTIVLLCKPEPELNAAIPSANPAK Unmodified 2560.3571 0.3570743 3549 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 83.486 83.61 3 9.7083E-10 96520 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.654 46.078 33343000 0 0 0 0 0 3550000 0 0 0 9824600 6667500 0 0 5171100 8129300 9327 3549 8493 79212;79213;79214;79215;79216 63395;63396;63397;63398;63399;63400 63399 5 DTLDDLFPNEDEQSPAPSPGGGDVSGQHGGYEIPAR Unmodified 3723.6561 0.65610569 4321 Q9H0B6 KLC2 Kinesin light chain 2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 82.682 82.829 3 4.5819E-22 95917 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 47.719 45.973 6541700 0 0 0 0 0 0 0 0 0 3919700 2622000 0 0 0 0 9328 4321 8494 79217;79218 63401;63402 63401 2 DTLDYSSNTMESALQYEK Unmodified 2093.9099 0.90993053 1579 P49589 CARS Cysteine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 2 4 2 1 1 1 1 77.575 76.117 2;3 5.1233E-88 92588 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 249.75 243.32 157440000 0 133390000 0 0 0 0 0 0 0 3812300 3353700 0 0 3510800 13378000 9329 1579 8495 79219;79220;79221;79222;79223;79224 63403;63404;63405;63406;63407;63408 63404 6 DTLEGDNMYTCSHCGK Unmodified 1886.7233 0.72333251 3024 Q70CQ2 USP34 Ubiquitin carboxyl-terminal hydrolase 34 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 39.878 35.03 3 0.03184 45639 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 27.85 24.189 18330000 0 18330000 0 0 0 0 0 0 0 0 0 0 0 0 0 9330 3024 8496 79225;79226 63409 63409 1 DTLENTIGHR Unmodified 1154.568 0.56799978 1445 P42126 ECI1 Enoyl-CoA delta isomerase 1, mitochondrial yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 33.445 33.654 3 0.031844 35636 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.718 35.829 48672000 0 0 0 2499400 1960300 0 0 0 1600700 5312300 7706100 5525600 0 7203700 16864000 9331 1445 8497 79227;79228;79229;79230;79231;79232;79233;79234 63410 63410 0 DTLGLFLR Unmodified 933.52837 0.5283668 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 83.852 83.905 2 0.0063976 97368 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 101.21 48.912 426310000 0 0 0 21273000 21887000 44789000 32477000 32285000 43564000 40570000 44230000 58245000 41588000 45403000 0 9332 528 8498 79235;79236;79237;79238;79239;79240;79241;79242;79243;79244;79245 63411;63412;63413;63414;63415;63416;63417;63418;63419;63420;63421;63422 63411 11 DTLGPMQK Unmodified 888.4375 0.43750288 546 O75821 EIF3G Eukaryotic translation initiation factor 3 subunit G yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By matching By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 27.213 26.762 2 0.040847 32425 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.29 64.068 447750000 0 238310000 0 12121000 8602900 12704000 8103700 10795000 11013000 13056000 28350000 28638000 16821000 19165000 40070000 9333 546 8499 79246;79247;79248;79249;79250;79251;79252;79253;79254;79255;79256;79257;79258;79259 63423;63424 63423 1 DTLLSPDSSFEYVPPKPK Unmodified 2019.0201 0.020073325 632 O95239 KIF4A Chromosome-associated kinesin KIF4A yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 81.281 77.263 3 0.0034095 92408 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 30.107 24.654 22524000 0 22524000 0 0 0 0 0 0 0 0 0 0 0 0 0 9334 632 8500 79260;79261 63425;63426 63426 2 DTLMISR Unmodified 834.42694 0.4269382 748;749 P01857;P01859 IGHG1;IGHG2 Ig gamma-1 chain C region;Ig gamma-2 chain C region no no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 40.459 40.639 2 0.033464 45322 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 139.92 94.944 242120000 0 0 0 71293000 1336300 3620300 0 119100000 3134800 13023000 10738000 10851000 5526200 0 3498900 9335 748;749 8501 79262;79263;79264;79265;79266;79267;79268;79269;79270;79271 63427 63427 1 DTLNRIPSLR Unmodified 1183.6673 0.6673199 158 O00461 GOLIM4 Golgi integral membrane protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 55.107 55.325 3 0.048043 62316 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 29.341 23.108 62460000 0 0 0 0 3396300 0 4927400 4476500 5099400 7631400 8307200 7172000 5686300 4924200 10840000 9336 158 8502 79272;79273;79274;79275;79276;79277;79278;79279;79280;79281 63428 63428 1 DTLPYEELQGLK Unmodified 1404.7137 0.71366097 3496 Q8TD19 NEK9 Serine/threonine-protein kinase Nek9 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 79.942 79.245 2 6.7623E-13 97032 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.63 114.96 332790000 0 264410000 0 0 0 6982200 6337600 0 4074900 10680000 0 12035000 8156900 7211100 12903000 9337 3496 8503 79282;79283;79284;79285;79286;79287;79288;79289;79290;79291 63429;63430;63431;63432 63430 4 DTLQSELVGQLYK Unmodified 1492.7773 0.77732386 154 O00429 DNM1L Dynamin-1-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.76 3 1 23 1 2 1 1 2 2 2 2 2 2 2 2 2 2 2 84.239 83.622 2;3 1.7876E-124 97296 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 211.78 119.91 1707900000 18667000 1235900000 7735700 6623300 21068000 45552000 28639000 30741000 34471000 61330000 36981000 46511000 25864000 32611000 75178000 9338 154 8504 79292;79293;79294;79295;79296;79297;79298;79299;79300;79301;79302;79303;79304;79305;79306;79307;79308;79309;79310;79311;79312;79313;79314;79315;79316;79317;79318 63433;63434;63435;63436;63437;63438;63439;63440;63441;63442;63443;63444;63445;63446;63447;63448;63449;63450 63447 18 DTLSIHYLMLPR Unmodified 1457.7701 0.77007041 1441 P41252 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS 10 0 1 1 83.835 84.026 3 0.0032109 96984 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.915 43.353 5799800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5799800 9339 1441 8505 79319 63451 63451 1 DTLTYFIYSVK Unmodified 1348.6915 0.69146896 499 O75446 SAP30 Histone deacetylase complex subunit SAP30 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 89.692 89.797 2 0.0043894 104194 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 61.593 45.26 23422000 0 0 0 0 1125200 2557500 1748100 1639700 2098200 5789000 3373700 3693700 1396500 0 0 9340 499 8506 79320;79321;79322;79323;79324;79325;79326;79327;79328;79329 63452;63453;63454;63455;63456;63457;63458;63459;63460;63461;63462 63452 11 DTLVMLVVDMSK Oxidation (M) 1365.6884 0.6883742 5282 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes yes 0 1 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 98.928 93.1 2 0.00013008 117721 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.813 79.949 10065000 10065000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9341 5282 8507 79330;79331;79332 63463;63464;63465 63465 6692 3 DTLVMLVVDMSK Unmodified 1349.6935 0.69345957 5282 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes yes 0 0 0 By MS/MS 2 0 1 1 99.629 91.499 2 0.00068585 117897 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 108.7 90.833 13206000 13206000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9342 5282 8507 79333 63466 63466 1 DTMARSEDLDNSIDK Oxidation (M) 1724.7523 0.75230767 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 32.725 28.768 3 0.0085485 37393 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 44.567 35.968 110020000 0 108040000 1982100 0 0 0 0 0 0 0 0 0 0 0 0 9343 5071 8508 79334;79335 63467 63467 6442 1 DTMARSEDLDNSIDK Unmodified 1708.7574 0.75739305 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 43.027 37.467 3 0.00050783 50972 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.894 59.345 153460000 23971000 129490000 0 0 0 0 0 0 0 0 0 0 0 0 0 9344 5071 8508 79336;79337;79338 63468;63469;63470;63471 63471 4 DTMDAINVLSK Unmodified 1205.5962 0.59618837 3950 Q96PZ0 PUS7 Pseudouridylate synthase 7 homolog yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 75.816 71.62 2 1.0742E-07 89086 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.49 82.716 254390000 0 254390000 0 0 0 0 0 0 0 0 0 0 0 0 0 9345 3950 8509 79339;79340 63472;63473 63472 2 DTMLQALR Oxidation (M) 962.48552 0.48551571 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 38.185 38.302 2 0.015069 41921 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.799 34.972 11354000 0 0 0 0 1518600 0 2060200 0 1958500 0 0 5816300 0 0 0 9346 3641 8510 79341;79342;79343;79344 63474 63474 5144 1 DTMSDLPEVR Unmodified 1161.5336 0.53358811 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 56.965 57.041 2 0.024368 65673 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 44.98 29.599 69744000 0 0 0 5937700 5780900 7199200 0 0 0 7628300 0 12294000 6719700 6635200 17549000 9347 1201 8511 79345;79346;79347;79348;79349;79350;79351;79352 63475;63476 63475 2 DTMSDQALEALSASLGTR Oxidation (M) 1880.8786 0.87857082 1113 P20810 CAST Calpastatin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.59 2.99 3 1 18 3 1 2 1 1 1 2 1 1 1 2 2 2 2 87.114 86.465 2;3 0 100394 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 276.51 227.16 368690000 0 89787000 1320800 6645800 7592600 5593400 7733700 19211000 11044000 13901000 20168000 53478000 19092000 31394000 81729000 9348 1113 8512 79353;79354;79355;79356;79357;79358;79359;79360;79361;79362;79363;79364;79365;79366;79367;79368;79369;79370;79371;79372;79373;79374 63477;63478;63479;63480;63481;63482;63483;63484;63485;63486;63487;63488;63489;63490;63491;63492;63493;63494;63495;63496 63484 1598 16 DTMSDQALEALSASLGTR Unmodified 1864.8837 0.8836562 1113 P20810 CAST Calpastatin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 2 1 2 92.507 92.643 2;3 5.0961E-26 107353 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 105.14 92.372 17633000 0 0 0 0 0 0 0 0 0 0 1215500 3193200 0 1144700 12080000 9349 1113 8512 79375;79376;79377;79378;79379;79380 63497;63498;63499;63500 63498 4 DTMSDQALEALSASLGTRQAEPELDLR Oxidation (M) 2932.4084 0.40839418 1113 P20810 CAST Calpastatin yes yes 0 1 1 By MS/MS 2 0 1 1 94.531 86.4 3 6.2133E-51 111830 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.236 79.66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9350 1113 8513 79381 63501 63501 1598 1 DTMSDQALEALSASLGTRQAEPELDLR Unmodified 2916.4135 0.41347956 1113 P20810 CAST Calpastatin yes yes 0 0 1 By MS/MS 2 0 1 1 96.063 93.572 3 0.012637 113229 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 24.927 18.897 1773200 0 0 1773200 0 0 0 0 0 0 0 0 0 0 0 0 9351 1113 8513 79382 63502 63502 1 DTMSDQALEALSASLGTRQAEPELDLRSIK Unmodified 3244.6245 0.62453497 1113 P20810 CAST Calpastatin yes yes 0 0 2 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 96.567 91.181 4 5.22E-67 114735 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 117.03 112.32 104220000 91664000 12559000 0 0 0 0 0 0 0 0 0 0 0 0 0 9352 1113 8514 79383;79384;79385 63503;63504;63505 63505 3 DTMSDQALEALSASLGTRQAEPELDLRSIK Oxidation (M) 3260.6194 0.61944959 1113 P20810 CAST Calpastatin yes yes 0 1 2 By MS/MS 2 0 1 1 94.27 86.139 4 4.5224E-20 111467 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.275 69.732 30040000 30040000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9353 1113 8514 79386 63506 63506 1598 1 DTNAPESFK Unmodified 1007.456 0.45598972 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 24.142 24.315 2 0.014807 25415 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 57.931 34.911 20506000 0 0 0 0 3021900 0 3799700 0 0 0 0 8709400 4974700 0 0 9354 2556 8515 79387;79388;79389;79390 63507 63507 1 DTNGENIAESLVAEGLATR Unmodified 1958.9545 0.95451296 3039 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 91.001 91.139 2 0.00015745 105546 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.156 57.769 2588800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2588800 9355 3039 8516 79391 63508 63508 1 DTNGENIAESLVAEGLATRR Unmodified 2115.0556 0.055623984 3039 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 87.564 86.85 3 1.3949E-05 100382 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.055 51.402 75764000 0 13248000 3436800 0 0 4403000 0 0 3082100 9732500 6538100 6334300 0 2671600 26318000 9356 3039 8517 79392;79393;79394;79395;79396;79397;79398;79399;79400 63509;63510;63511;63512;63513;63514;63515;63516 63511 8 DTNGSQFFITTVK Unmodified 1456.7198 0.71980898 1153 P23284 PPIB Peptidyl-prolyl cis-trans isomerase B yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.05 3.89 2 3 2 12 1 5 1 1 1 1 1 1 1 1 1 1 1 1 1 80.694 80.065 2;3 1.3624E-36 93463 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 184.27 164.67 6610100000 22346000 5780900000 33210000 24464000 27191000 26812000 35347000 34642000 23107000 43248000 89885000 102230000 32814000 72340000 261590000 9357 1153 8518 79401;79402;79403;79404;79405;79406;79407;79408;79409;79410;79411;79412;79413;79414;79415;79416;79417;79418;79419 63517;63518;63519;63520;63521;63522;63523;63524;63525;63526;63527;63528;63529;63530;63531;63532;63533;63534;63535;63536 63520 14 DTNIDHGQPRPPSNR Unmodified 1702.8135 0.81354322 261 O15164 TRIM24 Transcription intermediary factor 1-alpha yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 20.044 20.19 3 0.0018622 20341 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 46.408 39.971 39796000 0 0 0 2895500 2585400 0 5228200 5046100 4440300 6417400 5798200 0 0 0 7384800 9358 261 8519 79420;79421;79422;79423;79424;79425;79426;79427 63537;63538;63539;63540;63541 63540 4 DTNNNVAYWDVLK Unmodified 1550.7365 0.73652168 3470 Q8TAF3 WDR48 WD repeat-containing protein 48 yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By matching 10 0 6 1 1 1 1 1 1 81.987 82.092 2 0.014779 94282 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 40.589 28.723 16630000 0 0 0 0 1342500 0 0 2095700 1298400 0 2670900 0 0 2820100 6402000 9359 3470 8520 79428;79429;79430;79431;79432;79433 63542 63542 1 DTPDEPWAFPAR Unmodified 1400.6361 0.63607935 3039 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.782 76.842 2 1.3906E-05 88437 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 107.15 101.12 229680000 0 0 0 6788000 6646500 26647000 11644000 9216300 7951100 20013000 28871000 23457000 12405000 19016000 57026000 9360 3039 8521 79434;79435;79436;79437;79438;79439;79440;79441;79442;79443;79444;79445 63543;63544;63545;63546;63547;63548;63549;63550;63551;63552;63553;63554;63555;63556 63546 14 DTPLNIFVK Unmodified 1045.5808 0.5807963 603 O94915 FRYL Protein furry homolog-like yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 82.701 82.806 2 0.025695 95726 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 50.127 28.826 16433000 0 0 0 0 864340 0 1062200 1860400 0 1398900 1428600 1382900 2973400 0 5462000 9361 603 8522 79446;79447;79448;79449;79450;79451;79452;79453 63557 63557 1 DTPLSLACSGGR Unmodified 1232.5819 0.58193529 472;3250 Q8IWZ3;O75179 ANKHD1;ANKRD17 Ankyrin repeat and KH domain-containing protein 1;Ankyrin repeat domain-containing protein 17 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 54.655 54.791 2 0.0090517 63238 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 48.188 31.855 197860000 0 0 0 16624000 17972000 13256000 0 17101000 13491000 15699000 20025000 22240000 19912000 16773000 24767000 9362 3250;472 8523 79454;79455;79456;79457;79458;79459;79460;79461;79462;79463;79464 63558;63559;63560;63561;63562;63563;63564;63565;63566;63567 63566 9 DTPQEMEQTRSAVDEDRK Unmodified 2133.9597 0.95967469 2329 Q13617 CUL2 Cullin-2 yes yes 0 0 2 By MS/MS 2 0 1 1 36.948 30.519 3 0.0094061 42645 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.026 42.446 12281000 12281000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9363 2329 8524 79465 63568;63569 63569 2 DTPTQEDWLVSVLPEGSR Unmodified 2027.98 0.97999942 4578 Q9NQW7 XPNPEP1 Xaa-Pro aminopeptidase 1 yes yes 0 0 0 By MS/MS 10 0 1 1 91.853 91.99 2 0.00046753 106515 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.524 48.553 1755000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1755000 9364 4578 8525 79466 63570 63570 1 DTPTSAGPNSFNK Unmodified 1334.6103 0.61025853 3570 Q8WW12 PCNP PEST proteolytic signal-containing nuclear protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.232 30.424 2 2.9896E-05 31745 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.679 30.261 311310000 0 0 0 15272000 10843000 17324000 18494000 12253000 10786000 24454000 35024000 54116000 25108000 27604000 60035000 9365 3570 8526 79467;79468;79469;79470;79471;79472;79473;79474;79475;79476;79477;79478 63571;63572;63573;63574;63575;63576;63577;63578;63579;63580;63581;63582 63574 12 DTQEAQK Unmodified 818.37701 0.37701112 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS 1 0 1 1 106.21 111.47 2 0.011599 92082 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 143.02 44.604 85060000 85060000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9366 1518 8527 79479 63583 63583 1 DTQEVPLEK Unmodified 1057.5292 0.52915466 3120;5227;4251 Q7Z739;Q9BYJ9;Q9Y5A9 YTHDF3;YTHDF1;YTHDF2 YTH domain-containing family protein 3;YTH domain-containing family protein 1;YTH domain-containing family protein 2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.682 32.867 2 5.7067E-20 36124 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 171.73 149.77 1324600000 0 0 0 71977000 48414000 72825000 85068000 77055000 80334000 165270000 157680000 134380000 99556000 102640000 229370000 9367 3120;4251;5227 8528 79480;79481;79482;79483;79484;79485;79486;79487;79488;79489;79490;79491 63584;63585;63586;63587;63588;63589;63590;63591;63592;63593;63594;63595;63596 63584 13 DTQLQQIVDK Unmodified 1186.6194 0.61936665 1939 P63098 PPP3R1 Calcineurin subunit B type 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 54.423 53.37 2 1.0422E-10 67111 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 171.36 123.51 404940000 10137000 219260000 0 13318000 8524900 0 10932000 0 8651700 14017000 26069000 21516000 11647000 17299000 43567000 9368 1939 8529 79492;79493;79494;79495;79496;79497;79498;79499;79500;79501;79502;79503;79504 63597;63598;63599;63600;63601;63602;63603;63604;63605;63606;63607;63608;63609 63600 13 DTQQLAFPSLK Unmodified 1246.6558 0.65575216 1026 P15822 HIVEP1 Zinc finger protein 40 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 76.361 76.192 2 0.026262 87908 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 40.331 27.294 5744100 0 0 0 2545500 0 0 3198600 0 0 0 0 0 0 0 0 9369 1026 8530 79505;79506 63610 63610 1 DTQSGSLLFIGR Unmodified 1292.6725 0.67246486 1624 P50454 SERPINH1 Serpin H1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.997 79.055 2 2.2128E-14 91503 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 153.24 93.999 244830000 0 0 0 7512700 9110800 12896000 13165000 14501000 9735800 15586000 31416000 33324000 17225000 23945000 56414000 9370 1624 8531 79507;79508;79509;79510;79511;79512;79513;79514;79515;79516;79517;79518 63611;63612;63613;63614;63615;63616;63617;63618 63618 8 DTQSPSTCSEGLLGWSQK Unmodified 1979.8895 0.88946986 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 74.404 74.092 2 2.9864E-36 90856 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.35 115.49 135040000 0 39896000 0 5086100 5663800 7173600 6227900 7467600 7302000 9905900 8467700 10611000 7233000 7380000 12623000 9371 4285 8532 79519;79520;79521;79522;79523;79524;79525;79526;79527;79528;79529;79530;79531 63619;63620;63621;63622;63623;63624;63625;63626;63627;63628;63629;63630;63631 63622 13 DTREEDGADASEEDLTR Unmodified 1907.7981 0.79807189 3189 Q86X53 ERICH1 Glutamate-rich protein 1 yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 30.719 30.579 3 0.033717 33095 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 25.824 21.356 6280500 0 0 0 0 2465600 0 0 0 3815000 0 0 0 0 0 0 9372 3189 8533 79532;79533 63632 63632 1 DTSASAVAVGLK Unmodified 1117.5979 0.59790293 1426 P40939 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 48.509 48.376 2 0.010187 55285 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 46.819 12.098 14266000 0 0 0 5436800 2550300 0 0 0 0 0 0 0 0 0 6279400 9373 1426 8534 79534;79535;79536 63633;63634 63634 2 DTSATTALELVAGER Unmodified 1532.7682 0.76821573 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 20 2 2 2 1 2 2 2 2 2 2 1 82.085 82.179 2;3 6.3932E-20 94687 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 112.43 86.311 188950000 0 0 0 0 10918000 22865000 9453800 10200000 9259500 28637000 27554000 23314000 11327000 21948000 13478000 9374 643 8535 79537;79538;79539;79540;79541;79542;79543;79544;79545;79546;79547;79548;79549;79550;79551;79552;79553;79554;79555;79556 63635;63636;63637;63638;63639;63640;63641;63642;63643;63644;63645;63646 63639 12 DTSATTALELVAGERLYNVVVDTEVTGK Unmodified 2950.5135 0.51351118 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 99.194 94.765 3 8.236E-146 118030 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 163.46 157.24 94066000 77808000 14087000 2171000 0 0 0 0 0 0 0 0 0 0 0 0 9375 643 8536 79557;79558;79559;79560;79561 63647;63648;63649;63650 63649 4 DTSCLAEQWSGK Unmodified 1380.598 0.59797928 4134 Q9BT09 CNPY3 Protein canopy homolog 3 yes yes 0 0 0 By MS/MS 2 0 1 1 56.852 51.03 2 8.8608E-18 65819 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 195.58 174.07 44385000 0 44385000 0 0 0 0 0 0 0 0 0 0 0 0 0 9376 4134 8537 79562 63651 63651 1 DTSEAPSSSDEK Unmodified 1251.5103 0.51026971 5052 Q9UPN9 TRIM33 E3 ubiquitin-protein ligase TRIM33 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 5.5 4.5 2 2 1 1 1 1 56.495 57.996 2 0.0010661 99262 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 108.47 105.31 37050000 21762000 11940000 0 999450 0 2347800 0 0 0 0 0 0 0 0 0 9377 5052 8538 79563;79564;79565;79566 63652;63653;63654 63654 3 DTSEDIEELVEPVAAHGPK Unmodified 2034.9746 0.9745797 4011 Q99460 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.42 3.66 6 2 16 2 5 1 1 1 2 1 1 1 2 2 2 1 1 1 83.876 82.819 2;3 2.4174E-65 96281 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 206.58 201.78 2525900000 426640000 1441900000 55980000 4057900 20529000 44949000 3451200 13497000 10146000 105860000 104170000 186240000 9669500 28470000 70298000 9378 4011 8539 79567;79568;79569;79570;79571;79572;79573;79574;79575;79576;79577;79578;79579;79580;79581;79582;79583;79584;79585;79586;79587;79588;79589;79590 63655;63656;63657;63658;63659;63660;63661;63662;63663;63664;63665;63666;63667;63668;63669;63670;63671;63672 63659 14 DTSENADGQSDENK Unmodified 1508.5863 0.5862882 1473 P43243 MATR3 Matrin-3 yes yes 0 0 0 By MS/MS 1 0 1 1 5.6921 22.837 2 6.116E-06 3308 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 116.55 110.77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9379 1473 8540 79591 63673 63673 1 DTSENADGQSDENKDDYTIPDEYR Unmodified 2776.122 0.12198481 1473 P43243 MATR3 Matrin-3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 53.753 53.89 3 2.3629E-233 60987 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 219.35 218.39 855630000 0 0 0 47487000 62804000 58837000 44003000 50478000 64007000 66333000 84306000 101880000 95019000 66819000 113660000 9380 1473 8541 79592;79593;79594;79595;79596;79597;79598;79599;79600;79601;79602;79603 63674;63675;63676;63677;63678;63679;63680;63681;63682;63683;63684;63685;63686;63687;63688;63689;63690;63691;63692;63693;63694;63695;63696;63697;63698;63699;63700 63697 27 DTSEYIIQAYK Unmodified 1329.6452 0.64524705 2465 Q14CX7 NAA25 N-alpha-acetyltransferase 25, NatB auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.33 3.68 1 2 3 1 2 1 1 1 68.789 66.285 2 0.00025877 77400 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 109.71 87.477 1118900000 168880 104950000 0 0 0 0 270670000 383880000 359240000 0 0 0 0 0 0 9381 2465 8542 79604;79605;79606;79607;79608;79609 63701;63702;63703;63704;63705;63706;63707;63708 63702 7 DTSFEQHVLWHTGGK Unmodified 1740.822 0.82198264 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 2 60.581 60.878 2;3 0.00012514 68394 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.729 62.359 100860000 0 0 0 0 0 9999100 0 0 2074200 3881700 0 10819000 3626300 7279900 63183000 9382 1565 8543 79610;79611;79612;79613;79614;79615;79616;79617 63709;63710;63711;63712 63711 3 DTSGAAALEMMSQAMIR 3 Oxidation (M) 1829.7958 0.79576917 3366 Q8N7H5 PAF1 RNA polymerase II-associated factor 1 homolog yes yes 0 3 0 By MS/MS 10 0 1 1 54.846 55.471 2 0.0013069 62641 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 49.934 36.271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9383 3366 8544 79618 63713 63713 4940;4941;4942 1 DTSIAYFK Unmodified 943.4651 0.46509784 4100 Q9BQL6 FERMT1 Fermitin family homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 54.795 55.042 2 0.029645 62583 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 56.011 37.28 33782000 0 0 0 0 0 5577100 3737500 3933800 3702800 0 5727000 0 3242200 2979100 4883000 9384 4100 8545 79619;79620;79621;79622;79623;79624;79625;79626 63714;63715;63716;63717;63718 63714 5 DTSIQEVVSRPSSK Unmodified 1531.7842 0.78420015 3238 Q8IWC1 MAP7D3 MAP7 domain-containing protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.33 43.505 3 0.00029455 47663 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.472 45.462 119070000 0 0 0 6694100 7412200 6832900 6479300 6920000 6503600 8322000 14233000 14805000 9598700 13632000 17641000 9385 3238 8546 79627;79628;79629;79630;79631;79632;79633;79634;79635;79636;79637;79638 63719;63720;63721;63722;63723;63724;63725;63726;63727;63728 63722 10 DTSLLASATDPEPCSSPHRPQMVSPVSK Unmodified 2993.4223 0.42227011 2962 Q6PL24 TMED8 Protein TMED8 yes yes 0 0 1 By MS/MS 2 0 1 1 76.397 68.267 4 4.0507E-07 90046 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.417 43.675 15150000 15150000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9386 2962 8547 79639 63729 63729 1 DTSLYRPALEELRR Unmodified 1717.9111 0.911132 2252 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 0 0 2 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 2 2 1 2 2 2 2 2 1 2 2 66.183 66.338 3;4 0.0005522 75324 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.533 59.962 249590000 0 0 0 0 3532300 34557000 2686300 7608000 12045000 18025000 22077000 52961000 7145300 10618000 78335000 9387 2252 8548 79640;79641;79642;79643;79644;79645;79646;79647;79648;79649;79650;79651;79652;79653;79654;79655;79656;79657;79658;79659 63730;63731;63732;63733;63734;63735 63732 4 DTSMGNASSGMVRK Unmodified 1439.6497 0.64969728 293 O15541 RNF113A RING finger protein 113A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 22.587 23.082 3 0.0079601 23758 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 23.362 14.074 18689000 0 0 0 0 0 0 0 0 0 0 7323200 0 0 4150200 7215200 9388 293 8549 79660;79661;79662 63736;63737;63738 63737 3 DTSNDPGQLLR Unmodified 1214.5891 0.58912916 3761 Q96BN8 OTULIN Ubiquitin thioesterase otulin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 47.796 47.977 2 0.00064287 52932 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 78.516 54.395 120800000 0 0 0 0 5339100 15201000 9469700 5332000 4620100 19862000 13796000 0 12388000 12151000 22645000 9389 3761 8550 79663;79664;79665;79666;79667;79668;79669;79670;79671;79672 63739;63740;63741;63742;63743;63744;63745;63746 63744 7 DTSNHFHVFVGDLSPEITTEDIK Unmodified 2600.2395 0.23946159 2048 Q01085 TIAL1 Nucleolysin TIAR yes yes 0 0 0 By MS/MS 2 0 2 2 89.161 81.031 4 4.6983E-15 106170 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.365 81.561 64081000 64081000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9390 2048 8551 79673;79674 63747;63748;63749 63749 3 DTSQYVVGELAALENEQK Unmodified 1992.964 0.96401501 3418 Q8NDI1 EHBP1 EH domain-binding protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 92.346 87.435 3 1.4185E-05 108656 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.519 64.18 13100000 0 13100000 0 0 0 0 0 0 0 0 0 0 0 0 0 9391 3418 8552 79675 63750 63750 1 DTSSEEVNLSHIVPCEPVPEEK Unmodified 2494.1533 0.1533487 3301 Q8N0X7 SPG20 Spartin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 2 1 1 2 1 1 78.587 78.691 2;3 3.535E-67 90592 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 124.14 120.11 726840000 0 0 0 0 31532000 77804000 41499000 67943000 68943000 78998000 64676000 86230000 58905000 65672000 84637000 9392 3301 8553 79676;79677;79678;79679;79680;79681;79682;79683;79684;79685;79686;79687;79688 63751;63752;63753;63754;63755;63756;63757;63758;63759;63760;63761;63762;63763;63764;63765;63766;63767;63768;63769 63758 19 DTSSEEVNLSHIVPCEPVPEEKPK Unmodified 2719.3011 0.30107557 3301 Q8N0X7 SPG20 Spartin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 1 2 2 2 2 2 2 2 2 2 75.276 75.338 3;4 1.3079E-09 86532 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.612 55.45 536440000 0 0 0 14758000 37371000 11054000 46021000 68846000 29103000 43967000 43848000 92245000 43066000 44132000 62027000 9393 3301 8554 79689;79690;79691;79692;79693;79694;79695;79696;79697;79698;79699;79700;79701;79702;79703;79704;79705;79706;79707;79708;79709;79710;79711 63770;63771;63772;63773;63774;63775;63776;63777;63778;63779;63780;63781;63782;63783;63784;63785;63786 63775 17 DTSSFQEGTVFEVR Unmodified 1600.7369 0.73691561 10 A1X283 SH3PXD2B SH3 and PX domain-containing protein 2B yes yes 0 0 0 By MS/MS 10 0 1 1 74.89 75.201 2 0.0027173 86263 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.451 61.615 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9394 10 8555 79712 63787 63787 1 DTSSITSCGDGNVVK Unmodified 1538.6883 0.68825085 5292 Q9Y6Q9 NCOA3 Nuclear receptor coactivator 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.445 36.625 2 5.3459E-08 39379 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 117.09 64.512 81500000 0 0 0 6560600 4549600 5865400 5917000 6064200 4713500 5084200 8525400 10866000 6936100 7837500 8581300 9395 5292 8556 79713;79714;79715;79716;79717;79718;79719;79720;79721;79722;79723;79724 63788;63789;63790;63791;63792;63793;63794;63795;63796;63797;63798 63791 11 DTSSLESYLQTELHLYTEQSHK Unmodified 2608.2293 0.22929083 311 O43264 ZW10 Centromere/kinetochore protein zw10 homolog yes yes 0 0 0 By MS/MS 3 0 1 1 96.046 92.768 3 0.0023569 111157 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 35.015 30.853 3475500 0 3475500 0 0 0 0 0 0 0 0 0 0 0 0 0 9396 311 8557 79725 63799 63799 1 DTSSLLRMELQQVEGLK Unmodified 1946.0143 0.014276441 3998 Q96T51 RUFY1 RUN and FYVE domain-containing protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 96.643 91.822 3 0.026472 113817 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 31.462 14.974 12257000 0 12257000 0 0 0 0 0 0 0 0 0 0 0 0 0 9397 3998 8558 79726 63800 63800 1 DTSSSTVVSTQR Unmodified 1266.6052 0.60517315 1302 P31483 TIA1 Nucleolysin TIA-1 isoform p40 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.462 18.657 2 0.0046235 18872 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 68.893 37.819 86878000 0 0 0 4671000 3975800 7411700 6459600 4576400 3768000 10083000 7936900 8933100 5879100 6205300 16978000 9398 1302 8559 79727;79728;79729;79730;79731;79732;79733;79734;79735;79736;79737;79738 63801;63802;63803;63804;63805;63806;63807;63808;63809;63810;63811;63812 63802 11 DTSVEGSEMVPGK Unmodified 1334.6024 0.60239596 1078 P18754 RCC1 Regulator of chromosome condensation yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 38.8 39.45 2 0.0076708 43449 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.398 49.247 26443000 0 0 0 0 0 0 0 0 0 0 5361900 8283200 0 0 12798000 9399 1078 8560 79739;79740;79741 63813;63814 63814 2 DTSVLQWRVV Unmodified 1201.6455 0.64552182 699 O95834 EML2 Echinoderm microtubule-associated protein-like 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 87.356 83.719 2 0.027789 103949 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.36 106.36 50819000 0 44260000 6558400 0 0 0 0 0 0 0 0 0 0 0 0 9400 699 8561 79742;79743 63815 63815 1 DTTFAQVLK Unmodified 1021.5444 0.5444108 3635 Q92600 RQCD1 Cell differentiation protein RCD1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65.686 64.755 2 0.019227 74225 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 54.157 29.306 382050000 5148300 132900000 0 16998000 14865000 19675000 14860000 19732000 20965000 21189000 18641000 26711000 22446000 21122000 26798000 9401 3635 8562 79744;79745;79746;79747;79748;79749;79750;79751;79752;79753;79754;79755;79756;79757 63816;63817;63818;63819;63820;63821;63822;63823 63817 8 DTTFLESDCDEQLLITVAFNQPVK Unmodified 2782.3371 0.33712672 324 O43396 TXNL1 Thioredoxin-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 98.391 95.4 3 4.3471E-75 117319 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 126.61 123.08 43100000 25014000 0 18085000 0 0 0 0 0 0 0 0 0 0 0 0 9402 324 8563 79758;79759;79760 63824;63825;63826 63825 3 DTTINEIEDTFR Unmodified 1452.6733 0.67325272 2639 Q16864 ATP6V1F V-type proton ATPase subunit F yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 82.317 82.369 2 0.0022534 95018 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.624 56.252 18432000 0 0 0 0 1603200 3425600 0 0 0 2813800 2209000 0 0 0 8380200 9403 2639 8564 79761;79762;79763;79764;79765 63827;63828 63828 2 DTTLETALNSK Unmodified 1191.5983 0.59829686 1655 P51531 SMARCA2 Probable global transcription activator SNF2L2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 51.554 51.673 2 0.00032092 58914 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 95.523 74.898 82247000 0 0 0 9146800 6741000 9848100 8415300 0 5641700 0 11806000 11128000 0 0 19520000 9404 1655 8565 79766;79767;79768;79769;79770;79771;79772;79773;79774 63829;63830;63831;63832;63833 63833 5 DTTLFDLSQFGSSNTSHENLQK Unmodified 2468.1456 0.1455612 1106 P20585 MSH3 DNA mismatch repair protein Msh3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 82.962 83.151 3 4.224E-20 96018 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.357 78.46 24184000 0 0 0 0 0 0 0 4836300 4174400 0 0 0 0 0 15174000 9405 1106 8566 79775;79776;79777 63834;63835;63836 63835 3 DTTLNWK Unmodified 876.43413 0.43413207 1170 P23919 DTYMK Thymidylate kinase yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 46.257 41.104 2 0.035362 53155 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.359 47.802 189270000 0 189270000 0 0 0 0 0 0 0 0 0 0 0 0 0 9406 1170 8567 79778;79779 63837 63837 1 DTTLTEPVIRGLLK Unmodified 1554.8981 0.8981077 2504 Q15172 PPP2R5A Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform yes yes 0 0 1 By MS/MS 2 0 1 1 88.526 80.396 3 0.0080068 104490 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.298 32.079 22601000 22601000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9407 2504 8568 79780 63838 63838 1 DTTSAVLIQQTPEVIK Unmodified 1741.9462 0.9461801 2123 Q06190 PPP2R3A Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 77.393 77.481 2 0.0001389 89541 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 73.666 58.127 29210000 0 0 0 0 3308500 0 0 3493300 2293100 4946500 6645200 5336700 3186200 0 0 9408 2123 8569 79781;79782;79783;79784;79785;79786;79787 63839;63840;63841;63842 63842 4 DTTVGTLSQR Unmodified 1076.5462 0.54620171 1668 P51665 PSMD7 26S proteasome non-ATPase regulatory subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.506 28.701 2 1.7948E-06 31268 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 133.23 103.16 907780000 0 0 0 54913000 64391000 84503000 31650000 20405000 21733000 120760000 150560000 186350000 29332000 37700000 105480000 9409 1668 8570 79788;79789;79790;79791;79792;79793;79794;79795;79796;79797;79798;79799 63843;63844;63845;63846;63847;63848;63849;63850;63851;63852;63853 63843 6 DTTVIIWQVDPDTHLLK Unmodified 1993.052 0.052042156 4434 Q9H7D7 WDR26 WD repeat-containing protein 26 yes yes 0 0 0 By MS/MS 2 0 1 1 93.857 85.727 3 0.00056869 110921 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.98 54.271 25773000 25773000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9410 4434 8571 79800 63854 63854 1 DTVATQLSEAVDATR Unmodified 1575.774 0.77402939 421 O60664 PLIN3 Perilipin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.66 2.95 4 1 24 1 3 1 2 2 2 2 2 2 2 2 2 2 2 2 75.75 75.523 2;3 5.6744E-216 87372 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 237.49 209.72 3853400000 1368300 39632000 389450 133180000 282720000 258000000 227740000 364910000 245300000 364610000 354050000 396690000 291860000 337600000 555380000 9411 421 8572 79801;79802;79803;79804;79805;79806;79807;79808;79809;79810;79811;79812;79813;79814;79815;79816;79817;79818;79819;79820;79821;79822;79823;79824;79825;79826;79827;79828;79829 63855;63856;63857;63858;63859;63860;63861;63862;63863;63864;63865;63866;63867;63868;63869;63870;63871;63872;63873;63874;63875;63876;63877;63878;63879;63880;63881;63882;63883;63884;63885;63886;63887;63888;63889;63890;63891;63892;63893 63882 33 DTVATQLSEAVDATRGAVQSGVDK Unmodified 2417.2034 0.20341043 421 O60664 PLIN3 Perilipin-3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS 4.57 3.46 3 2 2 2 2 1 1 1 86.288 83.156 3 4.8766E-159 103724 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 211.06 194.5 1119800000 128380000 948880000 31612000 0 0 0 0 0 0 4810600 0 0 0 0 6112600 9412 421 8573 79830;79831;79832;79833;79834;79835;79836 63894;63895;63896;63897;63898;63899;63900;63901 63894 8 DTVDGQRILEK Unmodified 1272.6674 0.66737948 2689 Q4V328 GRIPAP1 GRIP1-associated protein 1 yes yes 0 0 1 By MS/MS 2.5 0.5 2 2 4 40.278 35.419 2;3 0.001967 46238 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.616 66.874 71565000 0 71565000 0 0 0 0 0 0 0 0 0 0 0 0 0 9413 2689 8574 79837;79838;79839;79840 63902;63903 63902 0 DTVDPVQDEMLAR Unmodified 1487.6926 0.69260795 1590 P49736 MCM2 DNA replication licensing factor MCM2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.925 66.009 2 1.1125E-05 75508 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 104.43 97.581 80915000 0 0 0 2096500 2631500 5228900 3016000 3244000 2460100 5039500 10489000 9706200 5483800 7581500 23937000 9414 1590 8575 79841;79842;79843;79844;79845;79846;79847;79848;79849;79850;79851;79852 63904;63905;63906;63907;63908;63909;63910 63910 7 DTVDPVQDEMLAR Oxidation (M) 1503.6875 0.68752257 1590 P49736 MCM2 DNA replication licensing factor MCM2 yes yes 0 1 0 By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 52.204 52.518 2 0.00074915 58272 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.688 58.304 53232000 0 0 0 0 0 0 3448500 2070900 2533700 4538600 8222900 8667600 5239600 5243000 13268000 9415 1590 8575 79853;79854;79855;79856;79857;79858;79859;79860;79861 63911;63912;63913 63911 2557 3 DTVENLTAK Unmodified 989.50294 0.50293991 3964 Q96R06 SPAG5 Sperm-associated antigen 5 yes yes 0 0 0 By MS/MS 10 0 1 1 29.296 29.635 2 0.0197 31988 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 53.753 22.749 22702000 0 0 0 0 0 0 0 0 0 0 0 0 22702000 0 0 9416 3964 8576 79862 63914 63914 1 DTVQVELIPEK Unmodified 1269.6816 0.68163256 5253 Q9Y5X2 SNX8 Sorting nexin-8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 70.376 70.378 2 0.015518 80902 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 58.955 38.626 32009000 0 0 0 0 4503900 10679000 6763400 5168400 4893700 0 0 0 0 0 0 9417 5253 8577 79863;79864;79865;79866;79867 63915 63915 1 DTVSEDTIRLIEK Unmodified 1517.7937 0.7937022 3804 Q96E11 MRRF Ribosome-recycling factor, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 78.273 72.825 3 0.0026461 93468 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.004 45.271 22127000 7341700 14785000 0 0 0 0 0 0 0 0 0 0 0 0 0 9418 3804 8578 79868;79869;79870 63916;63917 63917 2 DTVSLHQQCSHR Unmodified 1466.6685 0.66845889 3250 Q8IWZ3 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 12.447 12.51 3 0.0017414 11754 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 57.802 43.838 59798000 0 0 0 2986700 4465800 6195100 6326800 7263300 5478500 7322500 0 0 7307200 12452000 0 9419 3250 8579 79871;79872;79873;79874;79875;79876;79877;79878;79879 63918;63919;63920;63921;63922;63923 63923 6 DTVTISGPQAPVFEFVEQLRK Unmodified 2360.2376 0.23761109 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 1 By MS/MS 2 0 1 1 99.334 91.204 3 7.1213E-48 117606 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 105.32 97.332 22068000 22068000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9420 1565 8580 79880 63924 63924 1 DTVVRWSAAK Unmodified 1131.6037 0.60365701 4152 Q9BTW9 TBCD Tubulin-specific chaperone D yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 43.729 38.399 2 4.9906E-10 52543 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 174.8 145.39 79098000 74424000 0 4673300 0 0 0 0 0 0 0 0 0 0 0 0 9421 4152 8581 79881;79882 63925 63925 1 DTYEETGLQGHPSQFSGRK Unmodified 2135.9872 0.98721007 545 O75818 RPP40 Ribonuclease P protein subunit p40 yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 6.8 3.92 4 6 2 2 1 1 1 1 1 1 41.154 39.184 3;4 2.5105E-06 49227 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 64.454 59.452 67754000 21699000 0 19823000 0 0 2720900 0 2390000 0 5580600 0 0 3613300 4881300 7046800 9422 545 8582 79883;79884;79885;79886;79887;79888;79889;79890;79891;79892 63926;63927;63928;63929;63930;63931;63932 63931 5 DTYFLSSEECITAGDFQNK Unmodified 2223.963 0.96302873 3476 Q8TAT6 NPLOC4 Nuclear protein localization protein 4 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 85.431 77.3 2 7.7696E-14 100878 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 131.26 122.66 7713400 7713400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9423 3476 8583 79893 63933 63933 1 DTYIENEK Unmodified 1010.4557 0.45565537 788 P04843 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 19.651 19.778 2 0.0090255 20105 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 84.227 68.729 83285000 0 0 0 3908200 7844200 6708500 9466600 7599800 6945300 9962200 0 0 11536000 8248000 11066000 9424 788 8584 79894;79895;79896;79897;79898;79899;79900;79901;79902;79903 63934;63935;63936;63937;63938;63939;63940 63936 7 DTYLSHFNPR Unmodified 1248.5887 0.58873523 1411 P40261 NNMT Nicotinamide N-methyltransferase yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 54.389 54.524 3 0.014376 60565 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.917 36.272 356950000 0 0 0 12667000 8346700 61409000 19441000 18416000 13769000 40850000 27727000 44791000 18316000 23329000 67891000 9425 1411 8585 79904;79905;79906;79907;79908;79909;79910;79911;79912;79913;79914;79915 63941;63942;63943;63944;63945;63946;63947;63948 63943 7 DTYLSHFNPRDYLEK Unmodified 1896.9006 0.90062689 1411 P40261 NNMT Nicotinamide N-methyltransferase yes yes 0 0 1 By MS/MS 3 0 1 1 82.279 79.007 3 0.00074555 94657 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 64.394 54.594 5415100 0 5415100 0 0 0 0 0 0 0 0 0 0 0 0 0 9426 1411 8586 79916 63949 63949 1 DTYLVHLTCSSSK Unmodified 1509.7133 0.71334339 1204 P26374 CHML Rab proteins geranylgeranyltransferase component A 2 yes yes 0 0 0 By MS/MS 2 0 2 2 64.983 56.694 2;3 0.022481 76543 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 36.022 15.925 27614000 27614000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9427 1204 8587 79917;79918 63950;63951;63952 63951 2 DTYMLSSTVSSK Unmodified 1317.6122 0.61223236 3844 Q96G03 PGM2 Phosphoglucomutase-2 yes yes 0 0 0 By MS/MS 2 0 2 2 54.6 48.795 2 1.2639E-09 63049 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.11 112.28 104240000 0 104240000 0 0 0 0 0 0 0 0 0 0 0 0 0 9428 3844 8588 79919;79920 63953;63954 63953 2 DTYVSSFPR Unmodified 1070.5033 0.50327426 1149 P23193 TCEA1 Transcription elongation factor A protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.04 52.186 2 0.0040314 59904 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 98.458 78.896 222890000 0 0 0 10890000 10908000 15991000 11976000 10948000 12552000 20173000 30073000 32169000 10577000 19532000 37101000 9429 1149 8589 79921;79922;79923;79924;79925;79926;79927;79928;79929;79930;79931;79932 63955;63956;63957;63958;63959;63960;63961;63962 63961 8 DTYVSSFPRAPSTSDSVR Unmodified 1970.9334 0.93338358 1149 P23193 TCEA1 Transcription elongation factor A protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 59.841 59.905 3 9.2801E-05 67676 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.773 46.365 64160000 0 0 0 5456700 3391400 0 6201300 0 5941500 9696100 8354900 0 7658800 6957900 10501000 9430 1149 8590 79933;79934;79935;79936;79937;79938;79939;79940;79941 63963;63964;63965 63965 2 DVACGANHTLVLDSQK Unmodified 1726.8308 0.83083277 4806 Q9P258 RCC2 Protein RCC2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 46.266 46.224 3 7.9543E-05 51445 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 74.141 51.133 45070000 0 0 0 9204200 8608000 0 0 14442000 0 0 0 12816000 0 0 0 9431 4806 8591 79942;79943;79944;79945 63966 63966 1 DVAGLDTEGSK Unmodified 1090.5142 0.51423288 391 O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS 8.3 3.41 1 1 8 2 1 1 1 1 1 1 1 1 36.445 36.599 2 3.0311E-05 92824 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 116.52 85.288 78232000 28117000 0 0 0 2523600 0 4827800 3351000 3679700 0 0 7387200 6533700 7131900 14680000 9432 391 8592 79946;79947;79948;79949;79950;79951;79952;79953;79954;79955 63967;63968;63969;63970;63971;63972 63969 5 DVAIDMMDSR Unmodified 1151.4951 0.49509412 2251 Q13190 STX5 Syntaxin-5 yes yes 0 0 0 By MS/MS 10 0 1 1 61.694 61.888 2 0.045286 69857 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 45.161 41.227 2257400 0 0 0 0 0 0 0 0 0 0 0 0 0 2257400 0 9433 2251 8593 79956 63973 63973 1 DVAIKEPLVDVVDPK Unmodified 1635.9083 0.90833803 4069 Q99873 PRMT1 Protein arginine N-methyltransferase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 6.12 3.89 3 1 4 1 2 1 1 1 1 1 80.466 78.228 3 0.000143 98929 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.424 85.644 124670000 16869000 71070000 2117000 0 0 0 3025000 0 0 0 6909400 10566000 0 0 14116000 9434 4069 8594 79957;79958;79959;79960;79961;79962;79963;79964 63974;63975;63976;63977;63978;63979 63977 3 DVAKPSEEEQK Unmodified 1258.6041 0.60411052 408 O60508 CDC40 Pre-mRNA-processing factor 17 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 9.7496 6.441 3 0.0037438 9270 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 54.784 18.45 12049000 0 12049000 0 0 0 0 0 0 0 0 0 0 0 0 0 9435 408 8595 79965;79966 63980 63980 1 DVALSVLSK Unmodified 930.5386 0.53859714 1273 P30260 CDC27 Cell division cycle protein 27 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 66.384 65.044 2 0.009035 75066 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 67.897 33.644 454580000 6852500 217380000 6219300 11865000 13412000 16550000 15118000 15536000 12706000 19267000 23237000 24483000 18154000 21393000 32405000 9436 1273 8596 79967;79968;79969;79970;79971;79972;79973;79974;79975;79976;79977;79978;79979;79980;79981;79982 63981;63982;63983;63984;63985;63986;63987;63988;63989;63990;63991;63992;63993 63981 13 DVAPSTVK Unmodified 815.43888 0.43888309 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.62 3.25 2 11 1 1 1 1 1 1 1 1 1 1 2 1 29.793 30.44 2 0.01026 14208 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 80.229 45.337 341040000 11464000 48980000 0 2808100 0 14394000 24222000 14428000 14339000 30910000 43605000 35625000 0 52680000 47585000 9437 1226 8597 79983;79984;79985;79986;79987;79988;79989;79990;79991;79992;79993;79994;79995 63994;63995;63996;63997;63998;63999;64000;64001;64002;64003 64002 10 DVAQSLENYTSK Unmodified 1353.6412 0.64122431 3951 Q96Q05 TRAPPC9 Trafficking protein particle complex subunit 9 yes yes 0 0 0 By MS/MS 2 0 1 1 64.439 58.531 2 0.0099855 74914 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.201 62.364 51862000 0 51862000 0 0 0 0 0 0 0 0 0 0 0 0 0 9438 3951 8598 79996 64004 64004 1 DVASTAGEEGDTSLR Unmodified 1506.6798 0.67979466 3414 Q8ND24 RNF214 RING finger protein 214 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 36.204 36.407 2 1.5891E-21 39245 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 117.98 100.54 111200000 0 0 0 10261000 6703100 0 11033000 8764500 0 11411000 9987400 10729000 10415000 18705000 13194000 9439 3414 8599 79997;79998;79999;80000;80001;80002;80003;80004;80005;80006 64005;64006;64007;64008;64009;64010;64011;64012;64013;64014 64007 10 DVASTAGEEGDTSLRESLHPVTR Unmodified 2426.1674 0.16735928 3414 Q8ND24 RNF214 RING finger protein 214 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 1 2 2 2 2 2 2 2 2 2 1 58.158 58.318 3;4 2.5204E-26 66743 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 94.358 83.49 293160000 0 0 0 6444600 11847000 29034000 20893000 23611000 24600000 33575000 31004000 32327000 32458000 30135000 17229000 9440 3414 8600 80007;80008;80009;80010;80011;80012;80013;80014;80015;80016;80017;80018;80019;80020;80021;80022;80023;80024;80025;80026;80027 64015;64016;64017;64018;64019;64020;64021;64022;64023;64024;64025;64026;64027;64028;64029;64030;64031;64032;64033;64034;64035;64036;64037 64030 21 DVATVAFCDAQSTQEIHEK Unmodified 2147.9793 0.9793475 2276 Q13363 CTBP1 C-terminal-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 67.21 66.933 3 1.5529E-102 80873 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 167.14 162.24 175960000 0 78561000 0 2595900 2918900 9721700 5019500 6299600 3154900 8629900 9862700 12881000 8199900 7982500 20137000 9441 2276 8601 80028;80029;80030;80031;80032;80033;80034;80035;80036;80037;80038;80039;80040;80041;80042 64038;64039;64040;64041;64042;64043;64044;64045;64046;64047;64048;64049;64050;64051;64052;64053 64045 16 DVATVCRQLAEK Unmodified 1388.7082 0.70819844 4772 Q9NZL9 MAT2B Methionine adenosyltransferase 2 subunit beta yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 47.633 42.413 2 8.9807E-14 55215 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 163.78 123.93 57215000 0 57215000 0 0 0 0 0 0 0 0 0 0 0 0 0 9442 4772 8602 80043;80044 64054;64055 64054 2 DVAVMQLR Oxidation (M) 946.4906 0.49060109 1721 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.059 36.24 2 0.0064733 40177 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 81.635 38.388 317010000 0 0 0 17412000 17848000 24445000 26250000 24975000 21325000 27212000 28101000 38386000 33736000 23500000 33816000 9443 1721 8603 80045;80046;80047;80048;80049;80050;80051;80052;80053;80054;80055;80056 64056;64057;64058;64059;64060;64061;64062;64063;64064;64065;64066;64067;64068 64057 2798 13 DVAVMQLR Unmodified 930.49569 0.49568646 1721 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.426 56.551 2 0.0044555 63165 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.61 78.676 448020000 0 0 0 19162000 23148000 33980000 27942000 44608000 22846000 45421000 43778000 50499000 37067000 36301000 63269000 9444 1721 8603 80057;80058;80059;80060;80061;80062;80063;80064;80065;80066;80067;80068 64069;64070;64071;64072;64073 64070 5 DVAVMQLRSGSK Unmodified 1289.6762 0.67617003 1721 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 48.665 42.789 3 1.939E-06 59062 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.697 67.78 90571000 87683000 0 2888800 0 0 0 0 0 0 0 0 0 0 0 0 9445 1721 8604 80069;80070 64074;64075 64074 1 DVAVSYYHFHR Unmodified 1392.6575 0.65748349 907 P0DMM9;P0DMN0 SULT1A3;SULT1A4 Sulfotransferase 1A3;Sulfotransferase 1A4 yes no 0 0 0 By matching By MS/MS 10 0 2 1 1 49.426 49.868 3 0.0044925 55289 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.077 23.319 11583000 0 0 0 0 0 0 0 0 3236300 0 0 0 0 0 8346700 9446 907 8605 80071;80072 64076 64076 1 DVAWAPSIGLPTSTIASCSQDGR Unmodified 2388.138 0.1379734 1769 P55735 SEC13 Protein SEC13 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 88.504 88.639 3 5.2337E-14 102645 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.186 73.089 28313000 0 0 0 0 0 2970400 0 2248200 0 2558400 3585300 4233800 0 3232100 9484500 9447 1769 8606 80073;80074;80075;80076;80077;80078;80079 64077;64078;64079;64080;64081;64082 64078 6 DVCTELDAHK Unmodified 1186.5288 0.52883709 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 31.806 31.305 3 0.022225 39938 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 36.671 24.805 171270000 0 71708000 0 4591700 5758200 8819600 7326400 7813700 4307400 8159600 10637000 13319000 9710500 5986400 13134000 9448 2291 8607 80080;80081;80082;80083;80084;80085;80086;80087;80088;80089;80090;80091;80092;80093 64083;64084;64085;64086 64084 4 DVCTELLPLIK Unmodified 1299.7108 0.7108242 1033 P16152 CBR1 Carbonyl reductase [NADPH] 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 90.011 90.153 2 0.0062534 104349 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.435 44.971 15421000 0 0 0 0 0 0 0 0 0 0 1418400 1276300 0 1627200 11099000 9449 1033 8608 80094;80095;80096;80097 64087 64087 1 DVCTELLPLIKPQGR Unmodified 1737.9447 0.94474031 1033 P16152 CBR1 Carbonyl reductase [NADPH] 1 yes yes 0 0 1 By MS/MS 10 0 1 1 85.241 85.41 3 0.030483 98641 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 28.812 24.569 6784100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6784100 9450 1033 8609 80098 64088 64088 1 DVDAAFMNK Oxidation (M) 1025.4488 0.44879585 2056;83;98 CON__Q01546;Q01546;CON__Q6ISB0;CON__Q9NSB2;Q9NSB2 KRT76;KRT84 Keratin, type II cytoskeletal 2 oral;Keratin, type II cuticular Hb4 no no 0 1 0 By MS/MS 10 0 1 1 33.224 32.816 2 0.036014 36130 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 41.025 6.0934 + 4038400 0 0 0 4038400 0 0 0 0 0 0 0 0 0 0 0 9451 83;2056;98 8610 80099 64089 64089 1 DVDAAYLNK Unmodified 1007.4924 0.49237523 77 CON__P19013;P19013 KRT4 Keratin, type II cytoskeletal 4 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 38.169 38.462 2 0.0040314 42694 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 98.458 57.231 + 182030000 0 0 0 0 0 3749400 120970000 0 0 0 0 16645000 40662000 0 0 9452 77 8611 80100;80101;80102;80103 64090;64091;64092 64092 3 DVDAAYMGR Oxidation (M) 1012.4284 0.42839476 96 CON__Q5XKE5;Q5XKE5 KRT79 Keratin, type II cytoskeletal 79 no no 0 1 0 By MS/MS 10 0 1 1 21.582 21.421 2 0.014443 22320 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 51.854 41.162 + 8113500 0 0 0 8113500 0 0 0 0 0 0 0 0 0 0 0 9453 96 8612 80104 64093 64093 130 1 DVDAAYMGR Unmodified 996.43348 0.43348014 96 CON__Q5XKE5;Q5XKE5 KRT79 Keratin, type II cytoskeletal 79 no no 0 0 0 By MS/MS 10 0 1 1 35.73 35.278 2 0.0034201 39265 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 104.37 90.59 + 27170000 0 0 0 27170000 0 0 0 0 0 0 0 0 0 0 0 9454 96 8612 80105 64094 64094 1 DVDAAYMNK Oxidation (M) 1041.4437 0.44371047 74;66;58;779;80;53 P04259;CON__P50446;CON__P13647;P13647;CON__O95678;O95678;CON__P02538;P02538;CON__P04259 KRT6B;KRT5;KRT75;KRT6A Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 6A no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.72 1.57 1 31 1 3 2 3 2 3 2 2 4 2 3 3 2 21.24 21.601 2 0.0023276 18080 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 89.752 42.758 + 2766200000 27842000 0 0 709950000 145640000 160550000 179000000 267040000 113500000 209450000 149260000 120380000 507890000 112090000 63604000 9455 779;80;74;53;58;66 8613 80106;80107;80108;80109;80110;80111;80112;80113;80114;80115;80116;80117;80118;80119;80120;80121;80122;80123;80124;80125;80126;80127;80128;80129;80130;80131;80132;80133;80134;80135;80136;80137 64095;64096;64097;64098;64099;64100;64101;64102;64103;64104;64105;64106;64107;64108;64109;64110;64111;64112;64113;64114 64096 51 20 DVDAAYMNK Unmodified 1025.4488 0.44879585 74;66;58;779;80;53 P04259;CON__P50446;CON__P13647;P13647;CON__O95678;O95678;CON__P02538;P02538;CON__P04259 KRT6B;KRT5;KRT75;KRT6A Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 6A no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 1 1 1 2 1 1 1 1 2 2 29.957 30.188 2 0.0029277 32704 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 125.25 23.609 + 6338600000 0 0 0 1636500000 247340000 274160000 236200000 696150000 150240000 472960000 385340000 452230000 1317000000 248090000 222370000 9456 779;80;74;53;58;66 8613 80138;80139;80140;80141;80142;80143;80144;80145;80146;80147;80148;80149;80150;80151;80152 64115;64116;64117;64118;64119;64120;64121;64122;64123;64124;64125;64126;64127;64128 64123 13 DVDAAYMSK Unmodified 998.4379 0.43789681 69;88 CON__P08729;CON__Q3KNV1;P08729 KRT7 Keratin, type II cytoskeletal 7 no no 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 30.793 31.041 2 0.005778 33509 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.827 30.401 + 260750000 0 0 0 0 22099000 24272000 27243000 18286000 0 25794000 21404000 43429000 24841000 24231000 29150000 9457 69;88 8614 80153;80154;80155;80156;80157;80158;80159;80160;80161;80162 64129;64130;64131;64132;64133 64133 5 DVDAAYMSK Oxidation (M) 1014.4328 0.43281144 69;88 CON__P08729;CON__Q3KNV1;P08729 KRT7 Keratin, type II cytoskeletal 7 no no 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 17.757 17.921 2 0.005952 17780 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 67.897 10.039 + 41170000 0 0 0 0 13963000 0 0 0 0 0 0 27207000 0 0 0 9458 69;88 8614 80163;80164 64134;64135 64134 82 2 DVDAAYVSK Unmodified 966.46583 0.46582612 103 CON__Q7Z794;Q7Z794 KRT77 Keratin, type II cytoskeletal 1b yes no 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 27.746 27.971 2 0.005778 30160 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 76.827 62.163 + 206390000 0 0 0 123700000 0 0 0 0 0 0 0 82689000 0 0 0 9459 103 8615 80165;80166;80167;80168 64136;64137;64138;64139 64138 4 DVDASPSPLSVQDLK Unmodified 1569.7886 0.78861683 3251 Q8IWZ8 SUGP1 SURP and G-patch domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.032 73.096 2 6.1123E-15 84199 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 103.88 95.367 166560000 0 0 0 9267700 11833000 17380000 10284000 10422000 11490000 17009000 16456000 16872000 8652700 12852000 24042000 9460 3251 8616 80169;80170;80171;80172;80173;80174;80175;80176;80177;80178;80179;80180 64140;64141;64142;64143;64144;64145;64146;64147;64148;64149;64150;64151 64140 12 DVDDGLQAAEEVGYPVMIK Oxidation (M) 2063.9721 0.97213685 2231 Q13085 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes yes 0 1 0 By MS/MS 2 0 1 1 85.666 80.892 2 2.6854E-17 100579 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.02 96.257 29350000 0 29350000 0 0 0 0 0 0 0 0 0 0 0 0 0 9461 2231 8617 80181 64152 64152 3624 1 DVDDGLQAAEEVGYPVMIK Unmodified 2047.9772 0.97722223 2231 Q13085 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes yes 0 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 1 3 89.993 84.581 2 1.9321E-64 106160 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 178.84 156.96 98476000 6074000 92402000 0 0 0 0 0 0 0 0 0 0 0 0 0 9462 2231 8617 80182;80183;80184;80185 64153;64154;64155;64156 64153 4 DVDDGSGSPHSPHQLSSK Unmodified 1848.8238 0.82383313 4393 Q9H4A3 WNK1 Serine/threonine-protein kinase WNK1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 17.725 17.913 3;4 4.5262E-06 17335 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 75.548 58.042 252950000 0 0 0 13357000 13959000 18793000 13022000 23108000 15211000 18691000 19748000 43315000 25777000 23224000 24740000 9463 4393 8618 80186;80187;80188;80189;80190;80191;80192;80193;80194;80195;80196;80197;80198;80199;80200;80201;80202;80203;80204;80205;80206;80207;80208;80209 64157;64158;64159;64160;64161;64162;64163;64164;64165;64166;64167;64168;64169 64166 12 DVDEAHYAYSFK Unmodified 1443.6307 0.63065962 3038 Q7KZ85 SUPT6H Transcription elongation factor SPT6 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.16 2.46 2 17 1 1 1 2 2 2 2 2 1 1 1 2 1 53.255 52.614 2;3 0.0040243 67217 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.161 54.442 102190000 6324200 26989000 0 2674100 3034400 0 6495700 5921300 4121600 10092000 8298700 5976000 6424100 9460300 6375500 9464 3038 8619 80210;80211;80212;80213;80214;80215;80216;80217;80218;80219;80220;80221;80222;80223;80224;80225;80226;80227;80228 64170;64171;64172;64173;64174 64170 5 DVDEAYMNK Oxidation (M) 1099.4492 0.44918978 67;51 CON__H-INV:HIT000292931;CON__P05787;P05787;CON__Q9H552 KRT8 Keratin, type II cytoskeletal 8 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.78 2.94 1 3 23 2 2 2 2 2 2 2 2 2 2 2 2 2 1 21.022 21.206 2 0.0024198 18084 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 111.01 104.9 + 1705600000 126600000 0 0 87812000 115040000 117370000 122950000 101480000 100560000 128280000 141740000 294560000 184460000 124950000 59817000 9465 51;67 8620 80229;80230;80231;80232;80233;80234;80235;80236;80237;80238;80239;80240;80241;80242;80243;80244;80245;80246;80247;80248;80249;80250;80251;80252;80253;80254;80255 64175;64176;64177;64178;64179;64180;64181;64182;64183;64184;64185;64186;64187;64188;64189;64190;64191;64192;64193;64194;64195;64196;64197;64198;64199;64200 64177 44 23 DVDEAYMNK Unmodified 1083.4543 0.45427516 67;51 CON__H-INV:HIT000292931;CON__P05787;P05787;CON__Q9H552 KRT8 Keratin, type II cytoskeletal 8 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.34 1 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 34.722 34.54 2 0.00092385 92879 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 129.55 122.07 + 3549400000 71139000 34564000 0 222090000 191490000 248200000 227250000 288970000 205050000 321210000 295290000 395690000 350700000 242060000 455680000 9466 51;67 8620 80256;80257;80258;80259;80260;80261;80262;80263;80264;80265;80266;80267;80268;80269;80270 64201;64202;64203;64204;64205;64206;64207;64208;64209;64210;64211;64212;64213;64214;64215;64216 64206 16 DVDEIEAWISEK Unmodified 1432.6722 0.67219008 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS 10 0 1 1 87.741 87.891 2 0.0009629 101613 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.006 54.57 1497100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1497100 9467 2344 8621 80271 64217;64218 64217 2 DVDELPSLQPSVGSPSRPSSSR Unmodified 2296.1295 0.12951721 371 O43815 STRN Striatin yes yes 0 0 1 By MS/MS 10 0 1 1 68.101 68.595 3 0.00031386 78111 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.808 39.91 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9468 371 8622 80272 64219 64219 1 DVDETGITVASLER Unmodified 1503.7417 0.74166663 3536 Q8WU90 ZC3H15 Zinc finger CCCH domain-containing protein 15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 72.794 73.054 2 1.4216E-11 83912 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 99.522 82.497 14505000 0 0 0 0 0 0 4500900 0 0 0 0 0 0 0 10004000 9469 3536 8623 80273;80274;80275;80276 64220;64221;64222;64223;64224;64225 64221 6 DVDFEGTDEPIFGK Unmodified 1567.7042 0.70421849 1451 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 79.139 79.109 2 0.0044059 91640 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.918 49.347 15397000 0 0 0 3808500 0 0 0 3540500 0 0 0 8047900 0 0 0 9470 1451 8624 80277;80278;80279 64226;64227 64227 2 DVDFELIK Unmodified 977.50696 0.50696266 1548 P48643 CCT5 T-complex protein 1 subunit epsilon yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.43 77.488 2 0.011906 89408 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 75.854 42.058 1142700000 0 0 0 41912000 39787000 107270000 60609000 57003000 43081000 110680000 122970000 133990000 79445000 100120000 245810000 9471 1548 8625 80280;80281;80282;80283;80284;80285;80286;80287;80288;80289;80290;80291 64228;64229;64230;64231;64232;64233;64234;64235;64236;64237;64238 64229 11 DVDFMYVELIQR Unmodified 1526.7439 0.74391524 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS 2 0 1 1 96.805 88.674 2 0.0061014 114534 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.763 69.127 9433300 9433300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9472 1986 8626 80292 64239 64239 1 DVDFMYVELIQR Oxidation (M) 1542.7388 0.73882986 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 1 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 87.244 87.408 2 0.012101 101549 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 41.54 32.351 6409000 0 0 0 0 0 0 0 0 0 0 1045500 2126300 0 0 3237200 9473 1986 8626 80293;80294;80295 64240 64240 3214 1 DVDFMYVELIQRCK Unmodified 1814.8695 0.86952646 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 1 By MS/MS 2 0 1 1 93.503 85.372 3 0.00039342 110589 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.959 81.575 5521400 5521400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9474 1986 8627 80296 64241 64241 1 DVDGAYMTK Oxidation (M) 1014.4328 0.43281144 780 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.86 1.06 2 109 1 1 10 9 9 11 6 7 9 6 11 11 11 9 19.294 19.403 2 0.002059 19418 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 91.069 46.674 + 36410000000 0 5073800 5819000 7260100000 1555800000 2293700000 1895100000 4866200000 1426300000 2938600000 2330300000 4563600000 4361400000 1825500000 1082900000 9475 780 8628 80297;80298;80299;80300;80301;80302;80303;80304;80305;80306;80307;80308;80309;80310;80311;80312;80313;80314;80315;80316;80317;80318;80319;80320;80321;80322;80323;80324;80325;80326;80327;80328;80329;80330;80331;80332;80333;80334;80335;80336;80337;80338;80339;80340;80341;80342;80343;80344;80345;80346;80347;80348;80349;80350;80351;80352;80353;80354;80355;80356;80357;80358;80359;80360;80361;80362;80363;80364;80365;80366;80367;80368;80369;80370;80371;80372;80373;80374;80375;80376;80377;80378;80379;80380;80381;80382;80383;80384;80385;80386;80387;80388;80389;80390;80391;80392;80393;80394;80395;80396;80397;80398;80399;80400;80401;80402;80403;80404;80405;80406;80407 64242;64243;64244;64245;64246;64247;64248;64249;64250;64251;64252;64253;64254;64255;64256;64257;64258;64259;64260;64261;64262;64263;64264;64265;64266;64267;64268;64269;64270;64271;64272;64273;64274;64275;64276;64277;64278;64279;64280;64281;64282;64283;64284;64285;64286;64287;64288;64289;64290;64291;64292;64293;64294;64295;64296;64297;64298;64299;64300;64301;64302;64303;64304;64305;64306;64307;64308;64309;64310;64311;64312;64313;64314;64315;64316;64317;64318;64319;64320;64321;64322;64323;64324;64325;64326;64327;64328;64329;64330;64331;64332;64333;64334;64335;64336;64337;64338;64339;64340;64341;64342;64343;64344;64345;64346;64347;64348;64349;64350;64351;64352;64353;64354;64355;64356;64357;64358;64359;64360;64361;64362;64363;64364;64365;64366;64367;64368;64369;64370;64371;64372;64373;64374;64375;64376;64377;64378;64379;64380;64381;64382;64383;64384;64385;64386;64387;64388;64389;64390;64391;64392;64393;64394;64395;64396;64397;64398;64399;64400;64401;64402;64403;64404;64405;64406;64407;64408;64409;64410;64411;64412;64413;64414;64415;64416;64417;64418;64419;64420 64376 936 177 DVDGAYMTK Unmodified 998.4379 0.43789681 780 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.52 3.05 3 1 17 1 2 1 2 1 1 1 3 1 2 1 1 2 1 1 28.813 28.062 2 0.0031256 30136 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 91.069 46.674 + 58426000000 114420000 297810000 6646300 8069400000 3739300000 3189300000 2537600000 10125000000 2379300000 5107800000 5060700000 8016200000 5039000000 2816800000 1926900000 9476 780 8628 80408;80409;80410;80411;80412;80413;80414;80415;80416;80417;80418;80419;80420;80421;80422;80423;80424;80425;80426;80427;80428 64421;64422;64423;64424;64425;64426;64427;64428;64429;64430;64431;64432;64433;64434;64435;64436;64437;64438;64439;64440;64441;64442;64443;64444;64445;64446;64447;64448;64449;64450;64451;64452;64453;64454 64422 34 DVDGAYMTKVDLQAK Unmodified 1652.808 0.80797206 780 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 1 By matching By MS/MS By MS/MS 10 0 3 1 1 1 62.205 62.194 3 0.00092918 70650 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 52.42 39.007 + 16924000 0 0 0 1249800 0 0 0 3723200 0 0 0 11951000 0 0 0 9477 780 8629 80429;80430;80431 64455;64456 64456 2 DVDGFHVINVGR Unmodified 1326.668 0.66804818 993 P13995 MTHFD2 Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial;NAD-dependent methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS 10 0 5 1 1 1 1 1 69.538 69.742 3 0.035595 79489 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 31.478 24.023 13035000 0 0 0 0 0 2155800 0 1787100 0 0 2026700 0 1637800 0 5427900 9478 993 8630 80432;80433;80434;80435;80436 64457 64457 1 DVDGLTSINAGR Unmodified 1216.6048 0.60477922 953 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 53.46 53.225 2 0.00046098 60615 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 79.489 65.486 182320000 0 0 0 40879000 33272000 0 58806000 49367000 0 0 0 0 0 0 0 9479 953 8631 80437;80438;80439;80440 64458;64459;64460;64461 64461 4 DVDGVFLSK Unmodified 978.50221 0.50221163 100 CON__Q7RTT2;CON__Q8N1N4-2;Q8N1N4 KRT78 Keratin, type II cytoskeletal 78 yes no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 60.574 60.568 2 0.0090555 69899 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 67.838 40.313 + 493150000 0 0 0 128500000 29225000 40921000 37708000 112340000 29956000 0 0 67440000 47049000 0 0 9480 100 8632 80441;80442;80443;80444;80445;80446;80447;80448 64462;64463;64464;64465 64464 4 DVDIIDHHDNTYTVK Unmodified 1783.8377 0.83769228 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 50.915 51.064 3 6.9154E-08 57961 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 72.175 60.483 251350000 0 0 0 12892000 8684400 21101000 12705000 14728000 0 0 31419000 42329000 22995000 19601000 64899000 9481 1124 8633 80449;80450;80451;80452;80453;80454;80455;80456;80457;80458 64466;64467;64468;64469;64470;64471;64472;64473;64474;64475;64476;64477 64470 12 DVDLEFLAK Unmodified 1048.5441 0.54407645 1755 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.94 3.85 1 4 2 11 4 2 1 1 1 1 1 1 1 1 1 1 1 1 82.833 81.081 2 0.0035244 93976 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.9 89.113 3087400000 709860000 2092700000 78770000 4458200 7113400 13448000 9400500 7580600 8240200 14026000 29234000 0 8970500 21586000 82008000 9482 1755 8634 80459;80460;80461;80462;80463;80464;80465;80466;80467;80468;80469;80470;80471;80472;80473;80474;80475;80476 64478;64479;64480;64481;64482;64483;64484;64485;64486;64487;64488;64489;64490;64491;64492;64493;64494;64495;64496;64497;64498;64499;64500;64501 64486 24 DVDNALR Unmodified 801.39808 0.39808091 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 20.636 20.924 2 0.029159 21213 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 75.915 30.942 195150000 0 0 0 10026000 0 27219000 0 11947000 0 27561000 24219000 23121000 22284000 22820000 25956000 9483 5187 8635 80477;80478;80479;80480;80481;80482;80483;80484;80485 64502;64503;64504 64504 3 DVDNAYMIK Oxidation (M) 1083.4907 0.49066067 79 CON__P35908v2;P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.65 1.6 2 1 63 1 2 4 4 5 7 4 4 7 8 6 6 4 4 40.522 40.564 1;2 0.0022141 42346 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 90.308 74.927 + 15026000000 0 107380000 0 2511700000 1036900000 1205300000 807690000 1470000000 958650000 1328800000 1131600000 1666900000 1707100000 691140000 402510000 9484 79 8636 80486;80487;80488;80489;80490;80491;80492;80493;80494;80495;80496;80497;80498;80499;80500;80501;80502;80503;80504;80505;80506;80507;80508;80509;80510;80511;80512;80513;80514;80515;80516;80517;80518;80519;80520;80521;80522;80523;80524;80525;80526;80527;80528;80529;80530;80531;80532;80533;80534;80535;80536;80537;80538;80539;80540;80541;80542;80543;80544;80545;80546;80547;80548;80549;80550;80551 64505;64506;64507;64508;64509;64510;64511;64512;64513;64514;64515;64516;64517;64518;64519;64520;64521;64522;64523;64524;64525;64526;64527;64528;64529;64530;64531;64532;64533;64534;64535;64536;64537;64538;64539;64540;64541;64542;64543;64544;64545;64546;64547;64548;64549;64550;64551;64552;64553 64552 114 47 DVDNAYMIK Unmodified 1067.4957 0.49574604 79 CON__P35908v2;P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.56 1 1 13 2 2 1 1 1 1 1 1 1 1 1 1 1 48.606 47.986 2 0.0036184 54593 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 109.86 95.705 + 15652000000 0 575240000 0 1817300000 729030000 1080700000 700640000 1766400000 687750000 1325200000 1157000000 2266600000 2176800000 683980000 685680000 9485 79 8636 80552;80553;80554;80555;80556;80557;80558;80559;80560;80561;80562;80563;80564;80565;80566 64554;64555;64556;64557;64558;64559;64560;64561;64562;64563;64564;64565;64566;64567;64568;64569;64570;64571 64555 18 DVDPGEHYILK Unmodified 1284.635 0.63501672 794 P05089 ARG1 Arginase-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 2 1 1 2 1 1 1 2 50.759 50.782 2;3 1.7865E-05 57473 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 133.13 110.39 387110000 0 0 0 126570000 25656000 25597000 0 76981000 0 26865000 26574000 38876000 39995000 0 0 9486 794 8637 80567;80568;80569;80570;80571;80572;80573;80574;80575;80576;80577 64572;64573;64574;64575;64576;64577;64578;64579;64580 64574 8 DVDQETGEDLNPNR Unmodified 1600.6965 0.69650735 2414 Q14562 DHX8 ATP-dependent RNA helicase DHX8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching 10 0 11 1 1 2 1 1 1 1 1 1 1 36.552 36.71 2 0.0011893 40997 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 76.143 70.171 34445000 0 0 0 2748800 2931600 2768400 1973000 1608200 0 2990300 0 7583800 4061100 2657800 5121900 9487 2414 8638 80578;80579;80580;80581;80582;80583;80584;80585;80586;80587;80588 64581;64582;64583;64584;64585;64586 64585 6 DVDRIIGLDQVAGMSETALPGAFK Oxidation (M) 2518.2737 0.2737386 1356 P35579 MYH9 Myosin-9 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 6.45 3.89 4 1 6 2 2 1 1 1 1 1 1 1 88.568 87.388 3 6.1765E-16 105880 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 90.475 86.493 106660000 28387000 15342000 15649000 0 0 0 0 0 0 12008000 8399300 4054700 724110 1937900 20161000 9488 1356 8639 80589;80590;80591;80592;80593;80594;80595;80596;80597;80598;80599 64587;64588;64589;64590;64591;64592;64593;64594;64595;64596;64597;64598 64596 2073 12 DVDRIIGLDQVAGMSETALPGAFK Unmodified 2502.2788 0.27882398 1356 P35579 MYH9 Myosin-9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 2 3 1 96.109 91.612 3 4.9495E-31 114450 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.94 103.58 164150000 67576000 91348000 5223400 0 0 0 0 0 0 0 0 0 0 0 0 9489 1356 8639 80600;80601;80602;80603;80604;80605 64599;64600;64601;64602;64603;64604 64603 6 DVDRYQAVLANLLLEEDNK Unmodified 2217.1277 0.12772629 3535 Q8WU79 SMAP2 Stromal membrane-associated protein 2 yes yes 0 0 1 By MS/MS 2 0 1 1 97.333 89.203 3 7.4464E-06 115211 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.325 51.865 5835800 5835800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9490 3535 8640 80606 64605 64605 1 DVDSAYMNK Oxidation (M) 1057.4386 0.4386251 960;105 CON__Q8BGZ7;P12035;CON__P12035 KRT3 Keratin, type II cytoskeletal 3 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 7.8352 7.9691 2 0.0072443 6526 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 63.48 50.491 + 31970000 0 0 0 6166900 2017200 0 0 8531700 2454000 4117400 7019800 0 0 0 1662700 9491 105;960 8641 80607;80608;80609;80610;80611;80612;80613 64606;64607;64608;64609 64609 138 4 DVDSAYMNK Unmodified 1041.4437 0.44371047 960;105 CON__Q8BGZ7;P12035;CON__P12035 KRT3 Keratin, type II cytoskeletal 3 no no 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 27.365 27.521 2 0.012004 29466 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 61.962 25.567 + 15992000 0 0 0 3944300 0 0 3056900 0 0 0 0 8990400 0 0 0 9492 105;960 8641 80614;80615;80616 64610;64611 64610 2 DVDVSEDSPPPLPER Unmodified 1650.7737 0.77369504 2113 Q05209 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 2 1 1 1 1 1 61.69 61.728 2 1.0091E-05 70323 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 100.55 78.561 51055000 0 0 0 3728400 2555900 5501900 7470000 0 4145700 5686800 8856300 8340900 4768600 0 0 9493 2113 8642 80617;80618;80619;80620;80621;80622;80623;80624;80625;80626 64612;64613;64614;64615;64616;64617;64618;64619;64620;64621 64614 10 DVDVYSQILRK Unmodified 1334.7194 0.71941505 4200 Q9BW27 NUP85 Nuclear pore complex protein Nup85 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.903 68.982 3 0.026371 78304 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 30.872 25.388 56294000 0 0 0 2537100 3306700 6110800 3356900 4374600 3450300 5984700 4616500 5227500 3552500 5458900 8317800 9494 4200 8643 80627;80628;80629;80630;80631;80632;80633;80634;80635;80636;80637;80638 64622 64622 1 DVDYSDALTEK Unmodified 1254.5616 0.561577 1655 P51531 SMARCA2 Probable global transcription activator SNF2L2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 50.954 51.092 2 0.00036896 57270 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 108.15 103.46 78172000 0 0 0 12609000 9838500 0 0 0 0 0 13388000 16460000 0 0 25876000 9495 1655 8644 80639;80640;80641;80642;80643;80644;80645;80646 64623;64624;64625;64626;64627;64628;64629;64630 64628 8 DVDYVCISDNYWLGK Unmodified 1845.8244 0.82435041 3910 Q96KP4 CNDP2 Cytosolic non-specific dipeptidase yes yes 0 0 0 By MS/MS 2 0 1 1 90.808 82.677 2 0.00071291 107294 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.653 76.396 13017000 13017000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9496 3910 8645 80647 64631;64632 64632 2 DVEDDMQR Oxidation (M) 1022.3975 0.39748856 2831 Q5VZE5 NAA35 N-alpha-acetyltransferase 35, NatC auxiliary subunit yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 6.9202 6.9897 2 0.0069857 4763 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 79.116 69.875 51978000 0 0 0 1001100 2664900 1930400 2510300 0 7577800 11332000 11906000 13056000 0 0 0 9497 2831 8646 80648;80649;80650;80651;80652;80653;80654;80655 64633;64634;64635 64633 4479 3 DVEDDMQR Unmodified 1006.4026 0.40257394 2831 Q5VZE5 NAA35 N-alpha-acetyltransferase 35, NatC auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 20.273 20.393 2 0.032055 20899 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 54.549 45.079 170130000 0 0 0 3905400 5123600 7192200 1516200 0 0 26195000 55263000 70934000 0 0 0 9498 2831 8646 80656;80657;80658;80659;80660;80661;80662 64636 64636 1 DVEDDMQRR Unmodified 1162.5037 0.50368497 2831 Q5VZE5 NAA35 N-alpha-acetyltransferase 35, NatC auxiliary subunit yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 18.606 18.789 3 0.015687 18694 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 77.732 69.512 38890000 0 0 0 0 3521900 0 0 0 0 0 0 35368000 0 0 0 9499 2831 8647 80663;80664 64637;64638 64637 1 DVEDEETWIREK Unmodified 1547.7104 0.71036651 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 55.519 55.723 3 0.01606 63336 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 34.768 29.651 14033000 0 0 0 0 0 4380800 0 0 0 2889100 3912100 0 0 2851200 0 9500 2344 8648 80665;80666;80667;80668 64639 64639 1 DVEDESTGLEK Unmodified 1220.5408 0.54084156 1383 P36952 SERPINB5 Serpin B5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.92 3.91 1 3 1 8 2 2 1 1 1 1 1 1 2 1 34.832 34.007 2 1.2939E-05 30163 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 121.73 93.991 1698300000 522470000 153500000 2522600 90587000 0 165080000 0 0 0 0 194090000 194810000 0 120660000 254580000 9501 1383 8649 80669;80670;80671;80672;80673;80674;80675;80676;80677;80678;80679;80680;80681 64640;64641;64642;64643;64644;64645;64646;64647;64648;64649;64650;64651 64642 11 DVEDFLSPLLGK Unmodified 1331.6973 0.69728262 2280 Q13405 MRPL49 39S ribosomal protein L49, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 98.214 93.479 2 0.00026017 115686 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.573 76.901 16517000 0 16517000 0 0 0 0 0 0 0 0 0 0 0 0 0 9502 2280 8650 80682 64652 64652 1 DVEDMFSR Unmodified 997.4175 0.41749572 2566 Q15717 ELAVL1 ELAV-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 58.191 58.378 2 0.039628 65570 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.607 39.734 41621000 0 0 0 3857600 0 0 2863100 3261000 0 2897400 6742600 4766800 4633700 5537500 7060700 9503 2566 8651 80683;80684;80685;80686;80687;80688;80689;80690;80691 64653 64653 1 DVEEGDEK Unmodified 919.37707 0.3770707 5146 Q9Y3A5 SBDS Ribosome maturation protein SBDS yes yes 0 0 0 By MS/MS 1 0 1 1 106.24 111.5 2 0.018072 92122 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 89.296 61.122 88965000 88965000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9504 5146 8652 80692 64654 64654 1 DVEEGDEKFE Unmodified 1195.4881 0.48807771 5146 Q9Y3A5 SBDS Ribosome maturation protein SBDS yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32.362 31.745 2 0.038188 33927 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 106.42 84.652 211820000 16595000 26980000 0 17857000 14256000 9883700 15887000 9804400 6374300 12721000 18316000 20071000 12215000 10257000 20601000 9505 5146 8653 80693;80694;80695;80696;80697;80698;80699;80700;80701;80702;80703;80704;80705;80706 64655;64656;64657 64656 3 DVEENVGLIVYNGAMVDVGSLLQK Unmodified 2561.3047 0.30470438 3255 Q8IX12 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 100.75 92.62 3 8.1998E-57 119293 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.912 88.07 12174000 12174000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9506 3255 8654 80707 64658 64658 1 DVEFEVVGDAPEK Unmodified 1432.6722 0.67219008 4857 Q9UBT2 UBA2 SUMO-activating enzyme subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.07 3.95 2 2 1 9 3 2 1 1 1 1 1 1 1 1 1 76.14 75.207 2 9.7096E-12 78846 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 122.42 104.99 518620000 142250000 308760000 0 0 0 4256800 2621000 0 0 0 12435000 11228000 3977500 5935100 27159000 9507 4857 8655 80708;80709;80710;80711;80712;80713;80714;80715;80716;80717;80718;80719;80720;80721 64659;64660;64661;64662;64663;64664;64665;64666;64667;64668;64669;64670;64671;64672;64673;64674;64675;64676;64677 64670 19 DVEGSTSPQIGDK Unmodified 1331.6205 0.62048887 517 O75534 CSDE1 Cold shock domain-containing protein E1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.71 3.15 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34.338 34.923 2 1.1773E-33 92263 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 173.64 100.39 306250000 76991000 0 0 9823400 6663400 16796000 10404000 8524900 10890000 19670000 31229000 31331000 16534000 24275000 43123000 9508 517 8656 80722;80723;80724;80725;80726;80727;80728;80729;80730;80731;80732;80733;80734;80735 64678;64679;64680;64681;64682;64683;64684;64685;64686;64687;64688;64689;64690;64691;64692 64684 15 DVEGSTSPQIGDKVEFSISDK Unmodified 2237.0699 0.069936644 517 O75534 CSDE1 Cold shock domain-containing protein E1 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 75.755 72.008 3 1.0691E-08 90018 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.527 62.364 49393000 0 43216000 6177700 0 0 0 0 0 0 0 0 0 0 0 0 9509 517 8657 80736;80737;80738 64693;64694;64695;64696;64697 64694 5 DVELLLPTSS Unmodified 1072.5652 0.56520582 4812 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 85.528 85.55 2 0.027961 98275 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 43.808 35.868 21645000 0 0 0 1730300 2930700 0 3246100 0 0 2318100 0 3167700 2749200 2257900 3245000 9510 4812 8658 80739;80740;80741;80742;80743;80744;80745;80746 64698;64699;64700;64701 64700 4 DVELLYPVK Unmodified 1074.5961 0.59611202 834 P07099 EPHX1 Epoxide hydrolase 1 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 76.143 76.339 2 0.019448 88098 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 53.968 39.304 37500000 0 0 0 0 0 0 0 11417000 0 0 0 26082000 0 0 0 9511 834 8659 80747;80748 64702 64702 1 DVELSVVLPGDIIK Unmodified 1495.8498 0.84976052 2708 Q53SF7 COBLL1 Cordon-bleu protein-like 1 yes yes 0 0 0 By MS/MS 2 0 1 1 96.925 88.794 2 0.00082081 114740 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.962 67.562 6273600 6273600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9512 2708 8660 80749 64703 64703 1 DVERDVFLYR Unmodified 1310.6619 0.66190017 190 O14579 COPE Coatomer subunit epsilon yes yes 0 0 1 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 65.462 65.611 3 0.0040474 74940 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.348 46.136 34542000 0 0 0 0 689030 3771000 1866000 0 0 3750000 4539300 5640300 5784500 0 8502100 9513 190 8661 80750;80751;80752;80753;80754;80755;80756;80757 64704;64705;64706;64707 64707 4 DVEREVCFIDIACDEIPERYYK Unmodified 2818.2942 0.29421605 4964 Q9UKF7 PITPNC1 Cytoplasmic phosphatidylinositol transfer protein 1 yes yes 0 0 2 By MS/MS 2 0 1 1 91.63 83.5 4 1.5205E-06 108293 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.364 60.594 9133700 9133700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9514 4964 8662 80758 64708 64708 1 DVESYIHR Unmodified 1017.488 0.48795855 4588 Q9NR30 DDX21 Nucleolar RNA helicase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 39.69 39.784 2 0.022985 44188 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 60.709 42.33 28609000 0 0 0 0 2688400 3926500 2941400 0 3101700 5592200 5124800 0 0 5234100 0 9515 4588 8663 80759;80760;80761;80762;80763;80764;80765 64709;64710;64711;64712;64713 64710 5 DVETLEAPEGRPDSGVPSLR Unmodified 2123.0495 0.049475973 3606 Q8WZA9 IRGQ Immunity-related GTPase family Q protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 2 2 1 2 2 1 1 1 1 68.327 68.405 3 0.00042115 77831 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.696 36.695 114620000 0 0 0 3306100 2292200 25994000 4216300 3357700 13905000 23959000 7637100 10579000 0 6418700 12958000 9516 3606 8664 80766;80767;80768;80769;80770;80771;80772;80773;80774;80775;80776;80777;80778;80779;80780 64714;64715;64716;64717;64718;64719;64720;64721;64722;64723 64717 10 DVFASEVTPSDLQK Unmodified 1534.7515 0.75150304 3601 Q8WYP5 AHCTF1 Protein ELYS yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 70.977 70.535 2 5.7474E-12 81210 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 103.08 93.726 120910000 0 51391000 0 4871300 4608700 7169100 5528200 6700100 6701500 0 9413200 10735000 8484500 5308800 0 9517 3601 8665 80781;80782;80783;80784;80785;80786;80787;80788;80789;80790;80791 64724;64725;64726;64727;64728;64729;64730;64731;64732;64733;64734 64732 11 DVFEAFYK Unmodified 1017.4807 0.48074791 2332;2331 Q13619;Q13620 CUL4A;CUL4B Cullin-4A;Cullin-4B no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.309 78.369 2 0.010604 90506 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 79.116 57.816 263110000 0 0 0 7883500 10580000 32722000 15165000 19069000 11053000 25906000 25988000 25463000 16126000 23716000 49442000 9518 2331;2332 8666 80792;80793;80794;80795;80796;80797;80798;80799;80800;80801;80802;80803 64735;64736;64737;64738;64739;64740;64741;64742;64743;64744;64745 64736 11 DVFFYQADDEHYIPR Unmodified 1913.8584 0.85842773 1152 P23258;Q9NRH3 TUBG1;TUBG2 Tubulin gamma-1 chain;Tubulin gamma-2 chain yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 79.313 79.453 3 1.6709E-20 91728 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 115.78 105.31 46798000 0 0 0 0 0 8670300 0 0 0 0 0 10413000 0 0 27715000 9519 1152 8667 80804;80805;80806;80807 64746;64747;64748;64749;64750 64746 5 DVFGSNSNPYMGTR Unmodified 1543.6725 0.67254121 4641 Q9NU22 MDN1 Midasin yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 61.613 61.773 2 0.0040217 70568 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 46.706 36.182 5087000 0 0 0 0 0 0 0 2706600 0 2380400 0 0 0 0 0 9520 4641 8668 80808;80809 64751 64751 1 DVFHMVVEVPR Oxidation (M) 1342.6704 0.67035637 2505 Q15181 PPA1 Inorganic pyrophosphatase yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 2 1 1 2 1 2 2 1 2 2 1 72.609 72.665 3 0.00037216 82161 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 73.632 67.912 172280000 0 0 0 7121600 2480600 6591900 0 12262000 3550700 13688000 40085000 14788000 9779400 25689000 36245000 9521 2505 8669 80810;80811;80812;80813;80814;80815;80816;80817;80818;80819;80820;80821;80822;80823;80824;80825;80826 64752;64753;64754;64755;64756;64757;64758;64759;64760;64761;64762 64758 4110 11 DVFHMVVEVPR Unmodified 1326.6754 0.67544174 2505 Q15181 PPA1 Inorganic pyrophosphatase yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 82.056 82.208 3 0.00020987 94627 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.55 91.504 35771000 0 0 0 0 0 0 0 0 0 0 0 3433000 0 5987500 26350000 9522 2505 8669 80827;80828;80829 64763 64763 1 DVFIIQTVSK Unmodified 1148.6441 0.64412484 388 O60256 PRPSAP2 Phosphoribosyl pyrophosphate synthase-associated protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 79.774 75.064 2 0.00361 90767 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 93.649 78.21 56927000 14737000 31744000 10446000 0 0 0 0 0 0 0 0 0 0 0 0 9523 388 8670 80830;80831;80832;80833 64764;64765;64766 64764 3 DVFQELEK Unmodified 1006.4971 0.49712625 2629 Q16719 KYNU Kynureninase yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS 8.08 3.33 2 1 9 2 1 1 1 1 1 1 1 1 1 1 68.188 67.052 2 0.013935 76168 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.296 50.814 2367000000 0 2189900000 41183000 4239200 3853900 4284100 4785700 3421700 0 5227900 24353000 0 0 21838000 63921000 9524 2629 8671 80834;80835;80836;80837;80838;80839;80840;80841;80842;80843;80844;80845 64767;64768;64769;64770;64771;64772;64773 64770 7 DVFQHSQSR Unmodified 1102.5156 0.51557028 4762 Q9NZB2 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 14.806 14.89 2 0.013807 14338 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 59.245 43.042 23445000 0 0 0 3019900 1402400 1703700 2519100 0 1675100 2374100 0 5256300 0 5494700 0 9525 4762 8672 80846;80847;80848;80849;80850;80851;80852;80853 64774 64774 1 DVFRDPALK Unmodified 1059.5713 0.57129425 1847 P61353 RPL27 60S ribosomal protein L27 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 53.812 47.854 2 0.013129 59605 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 105.52 61.074 80524000 16663000 31446000 32415000 0 0 0 0 0 0 0 0 0 0 0 0 9526 1847 8673 80854;80855;80856 64775 64775 0 DVFREATTDFTVDSRPLTQVGGDHIK Unmodified 2903.4413 0.44134929 487 O75369 FLNB Filamin-B yes yes 0 0 2 By MS/MS 2 0 1 1 85.542 77.412 4 0.00058494 100986 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 36.864 30.703 23204000 23204000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9527 487 8674 80857 64776 64776 1 DVFSPIGER Unmodified 1018.5084 0.50835964 1771 P55786 NPEPPS Puromycin-sensitive aminopeptidase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 60.454 60.35 2 0.0095702 68575 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 66.351 33.881 27803000 0 0 0 8031500 1283600 0 1988500 0 0 0 12920000 0 3579200 0 0 9528 1771 8675 80858;80859;80860;80861;80862 64777;64778;64779 64777 3 DVFSQPEISNEAVNLTNVLPADNSSTGCSK Unmodified 3192.4881 0.48810107 1026 P15822 HIVEP1 Zinc finger protein 40 yes yes 0 0 0 By MS/MS 2 0 1 1 92.764 87.854 3 1.4974E-11 109115 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 57.347 49.168 18065000 0 18065000 0 0 0 0 0 0 0 0 0 0 0 0 0 9529 1026 8676 80863 64780;64781 64780 2 DVGAQILLHSHK Unmodified 1316.7201 0.72008375 3910 Q96KP4 CNDP2 Cytosolic non-specific dipeptidase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.67 2.87 3 2 1 2 2 1 1 56.471 51.898 3 1.6467E-05 55169 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.522 78.156 147280000 60502000 46925000 9158700 0 0 0 0 0 0 0 0 0 0 0 30695000 9530 3910 8677 80864;80865;80866;80867;80868;80869 64782;64783;64784;64785;64786;64787;64788 64783 6 DVGHRDQMAAAR Unmodified 1325.6259 0.62586579 1340 P35221 CTNNA1 Catenin alpha-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 9.7641 9.9106 3 6.2069E-09 7742 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 128.85 114.59 253950000 0 0 0 22093000 0 21792000 21250000 16123000 10077000 20504000 52774000 0 28184000 21208000 39944000 9531 1340 8678 80870;80871;80872;80873;80874;80875;80876;80877;80878;80879 64789;64790;64791;64792;64793;64794;64795;64796 64792 6 DVGHRDQMAAAR Oxidation (M) 1341.6208 0.62078041 1340 P35221 CTNNA1 Catenin alpha-1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 5.6945 5.7661 3 0.00011419 3306 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 81.92 71.594 217010000 0 0 0 30229000 19310000 26592000 27379000 21098000 18221000 48054000 26130000 0 0 0 0 9532 1340 8678 80880;80881;80882;80883;80884;80885;80886;80887;80888;80889 64797;64798;64799;64800;64801;64802;64803;64804 64803 2026 8 DVGIVALEIYFPSQYVDQAELEK Unmodified 2625.3214 0.3214003 2057 Q01581 HMGCS1 Hydroxymethylglutaryl-CoA synthase, cytoplasmic yes yes 0 0 0 By MS/MS 2 0 1 1 100.33 92.2 3 3.1533E-46 118761 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 123.14 89.348 46409000 46409000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9533 2057 8679 80890 64805 64805 1 DVGNLLR Unmodified 785.43955 0.43955179 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 49.303 49.472 2 0.023833 55582 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 84.025 47.438 187190000 0 0 0 18472000 11337000 19292000 0 13284000 0 19281000 21691000 22464000 14057000 16632000 30676000 9534 4634 8680 80891;80892;80893;80894;80895;80896;80897;80898;80899;80900 64806;64807;64808;64809;64810;64811;64812;64813;64814 64808 9 DVGRPNFEEGGPTSVGR Unmodified 1772.8442 0.84417465 2994 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.748 48.906 3 2.6975E-38 54596 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 110.26 103.2 284840000 0 0 0 13190000 14528000 11696000 18513000 11663000 14184000 20083000 25880000 52599000 39619000 20646000 42240000 9535 2994 8681 80901;80902;80903;80904;80905;80906;80907;80908;80909;80910;80911;80912 64815;64816;64817;64818;64819;64820;64821;64822;64823;64824;64825;64826;64827 64825 13 DVGRPNFEEGGPTSVGRK Unmodified 1900.9391 0.93913766 2994 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.67 1.6 1 23 1 1 2 2 2 2 2 2 2 2 2 2 2 41.318 41.191 3;4 1.3124E-08 46416 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 84.249 77.187 900090000 20492000 0 0 12271000 46753000 68593000 70638000 43868000 75397000 96004000 102260000 88708000 97052000 65115000 112940000 9536 2994 8682 80913;80914;80915;80916;80917;80918;80919;80920;80921;80922;80923;80924;80925;80926;80927;80928;80929;80930;80931;80932;80933;80934;80935;80936 64828;64829;64830;64831;64832;64833;64834;64835;64836;64837;64838;64839;64840;64841;64842;64843;64844;64845;64846;64847;64848;64849;64850;64851 64851 17 DVGRPQPGRENFQNWLK Unmodified 2040.029 0.028955723 1391 P37802 TAGLN2 Transgelin-2 yes yes 0 0 2 By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 2 67.336 67.652 3;4 0.037325 76733 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.348 19.461 187650000 0 0 0 0 0 11212000 0 0 5598200 0 0 8331800 0 0 162510000 9537 1391 8683 80937;80938;80939;80940;80941 64852;64853 64853 2 DVGSLASVQR Unmodified 1030.5407 0.5407224 1802 P58107 EPPK1 Epiplakin yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 40.693 40.854 2 0.011514 46174 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 87.308 59.089 26011000 0 0 0 0 2988100 3785200 3465300 0 1389000 6430500 3236000 4717300 0 0 0 9538 1802 8684 80942;80943;80944;80945;80946;80947;80948;80949 64854;64855 64855 2 DVGSLDEK Unmodified 861.40798 0.40797689 4029 Q99584 S100A13 Protein S100-A13 yes yes 0 0 0 By MS/MS By MS/MS By matching 1.75 0.433 1 3 2 1 1 41.65 40.241 2 0.012113 92938 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 101.33 46.541 197850000 122170000 73476000 2211600 0 0 0 0 0 0 0 0 0 0 0 0 9539 4029 8685 80950;80951;80952;80953 64856;64857;64858;64859 64858 4 DVHDALVQIISK Unmodified 1336.7351 0.73506511 4844 Q9UBK8 MTRR Methionine synthase reductase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 6.92 3.89 5 8 2 2 1 2 1 1 1 1 2 82.56 80.471 2;3 7.6926E-09 102104 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 142.89 104.14 327690000 103900000 160180000 9381200 0 0 14450000 0 1717600 0 5153200 4146200 3621300 0 0 25136000 9540 4844 8686 80954;80955;80956;80957;80958;80959;80960;80961;80962;80963;80964;80965;80966 64860;64861;64862;64863;64864;64865;64866;64867;64868 64867 6 DVHEITSDTAPKPDAVLK Unmodified 1934.9949 0.99492121 2688 Q4LE39 ARID4B AT-rich interactive domain-containing protein 4B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 3 1 1 1 1 1 1 1 1 1 1 1 1 1 57.003 55.891 3;4 2.002E-06 62673 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.13 70.179 183110000 0 57853000 3547600 5774400 6764100 7943100 8155900 9631100 6558000 10847000 12401000 17286000 11140000 9180600 16028000 9541 2688 8687 80967;80968;80969;80970;80971;80972;80973;80974;80975;80976;80977;80978;80979;80980;80981;80982 64869;64870;64871;64872;64873;64874;64875;64876;64877;64878;64879;64880;64881;64882;64883;64884;64885 64873 15 DVIAINQDPLGK Unmodified 1281.6929 0.69286595 818 P06280 GLA Alpha-galactosidase A yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 75.25 70.31 2 0.00020242 88028 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.78 88.3 56870000 0 56870000 0 0 0 0 0 0 0 0 0 0 0 0 0 9542 818 8688 80983;80984 64886;64887 64886 2 DVIAQSQSGTGK Unmodified 1189.5939 0.59388018 1400 P38919 EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.742 16.921 2 0.00030602 16122 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 82.417 60.286 38935000 0 0 0 1695300 1936800 3254300 3487600 2120200 2103500 3462000 4752800 6092100 3110400 3145000 3774900 9543 1400 8689 80985;80986;80987;80988;80989;80990;80991;80992;80993;80994;80995;80996 64888;64889;64890;64891;64892;64893;64894;64895;64896;64897;64898;64899 64893 12 DVIATDK Unmodified 760.39668 0.39668393 1422 P40925 MDH1 Malate dehydrogenase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS 1.67 0.471 1 2 2 1 45.8 45.071 2 0.021131 17159 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.61 50.253 343810000 110790000 233020000 0 0 0 0 0 0 0 0 0 0 0 0 0 9544 1422 8690 80997;80998;80999 64900;64901;64902;64903 64903 4 DVIATDKEDVAFK Unmodified 1449.7351 0.73512469 1422 P40925 MDH1 Malate dehydrogenase, cytoplasmic yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 7.27 3.62 2 2 7 1 3 1 1 1 1 1 1 1 53.73 51.788 2;3 7.037E-17 66375 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 147.71 113.75 282890000 33275000 164220000 0 0 0 0 3425400 2672200 0 4423500 15883000 17492000 0 7912000 33583000 9545 1422 8691 81000;81001;81002;81003;81004;81005;81006;81007;81008;81009;81010 64904;64905;64906;64907;64908;64909;64910;64911;64912 64904 9 DVIDEPIIEEPSR Unmodified 1510.7515 0.75150304 382 O60216 RAD21 Double-strand-break repair protein rad21 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 72.404 72.448 2 0.00062456 82434 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 88.441 81.061 84523000 0 0 0 9922000 4383800 11050000 6744500 0 0 0 8781700 8971700 8731900 10096000 15842000 9546 382 8692 81011;81012;81013;81014;81015;81016;81017;81018;81019;81020 64913;64914;64915;64916;64917;64918;64919;64920;64921;64922;64923 64918 10 DVIEEYFK Unmodified 1041.5019 0.50187728 1188 P25398 RPS12 40S ribosomal protein S12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 2 14 1 1 1 2 1 1 1 1 1 1 1 1 1 2 76.451 76.036 2 0.0070301 87709 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 91.041 80.168 3036500000 0 2297400000 47433000 21461000 26974000 31475000 15692000 21311000 16039000 44978000 76890000 85893000 67850000 77087000 206050000 9547 1188 8693 81021;81022;81023;81024;81025;81026;81027;81028;81029;81030;81031;81032;81033;81034;81035;81036 64924;64925;64926;64927;64928;64929;64930;64931;64932;64933;64934;64935;64936;64937 64924 14 DVIELTDDSFDK Unmodified 1395.6406 0.64055561 2496 Q15084 PDIA6 Protein disulfide-isomerase A6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.97 3.91 12 3 14 7 7 1 1 1 1 1 1 1 1 2 1 2 1 1 75.684 73.372 2;3 1.6226E-14 88515 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 143.89 143.89 3989300000 675840000 2484900000 15975000 36447000 37601000 81503000 42319000 44747000 36567000 71858000 94163000 101310000 53388000 65445000 147240000 9548 2496 8694 81037;81038;81039;81040;81041;81042;81043;81044;81045;81046;81047;81048;81049;81050;81051;81052;81053;81054;81055;81056;81057;81058;81059;81060;81061;81062;81063;81064;81065 64938;64939;64940;64941;64942;64943;64944;64945;64946;64947;64948;64949;64950;64951;64952;64953;64954;64955;64956;64957;64958;64959;64960;64961;64962;64963;64964 64949 25 DVIGAVDSK Unmodified 902.47091 0.4709115 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 34.452 34.079 2 0.00768 41316 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.442 50.083 123270000 0 48590000 0 4955300 4539300 8075900 8962900 4807500 5863100 8585400 9133200 0 10907000 8845100 0 9549 2193 8695 81066;81067;81068;81069;81070;81071;81072;81073;81074;81075;81076 64965;64966 64965 2 DVIIADCGK Unmodified 989.48518 0.48518136 1153 P23284 PPIB Peptidyl-prolyl cis-trans isomerase B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.91 1 1 11 1 1 1 1 1 1 1 1 1 1 1 1 1 41.792 41.996 2 0.01196 93746 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 84.498 53.886 643530000 64620000 44830000 0 22182000 22841000 23538000 28580000 32836000 22039000 0 57870000 70709000 29352000 56465000 167660000 9550 1153 8696 81077;81078;81079;81080;81081;81082;81083;81084;81085;81086;81087;81088;81089 64967;64968;64969;64970;64971;64972;64973;64974;64975;64976 64972 10 DVIINQEGEYIK Unmodified 1419.7246 0.72456001 4505 Q9HC35 EML4 Echinoderm microtubule-associated protein-like 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 65.02 63.835 2 0.00057079 73617 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 96.143 61.756 314420000 7629200 200270000 0 6031600 5371300 8679200 6376500 5387500 3869300 10018000 12641000 14864000 7889900 7360500 18028000 9551 4505 8697 81090;81091;81092;81093;81094;81095;81096;81097;81098;81099;81100;81101;81102;81103;81104 64977;64978;64979;64980;64981;64982;64983;64984;64985;64986;64987;64988;64989;64990;64991;64992 64986 15 DVISAQFENTTTSK Unmodified 1539.7417 0.74166663 2834 Q5VZL5 ZMYM4 Zinc finger MYM-type protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 58.647 58.125 2 8.611E-13 66457 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 108.35 94.921 60745000 0 23662000 0 0 3865600 3658900 6491200 0 0 4132300 3758900 0 5135400 4585500 5454900 9552 2834 8698 81105;81106;81107;81108;81109;81110;81111;81112;81113;81114;81115 64993;64994;64995;64996;64997;64998;64999;65000;65001;65002 64994 9 DVISNTSDVIGTCEAADVAQK Unmodified 2192.0267 0.026691621 4365 Q9H2G2 SLK STE20-like serine/threonine-protein kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.04 2.67 1 2 23 1 2 1 2 2 2 2 2 2 2 2 2 2 2 75.322 74.931 2;3 1.4362E-71 84772 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 203.11 187.73 267150000 9344300 42842000 0 7320900 8800800 26229000 15166000 11754000 14516000 24341000 20363000 21436000 14469000 18009000 32561000 9553 4365 8699 81116;81117;81118;81119;81120;81121;81122;81123;81124;81125;81126;81127;81128;81129;81130;81131;81132;81133;81134;81135;81136;81137;81138;81139;81140;81141 65003;65004;65005;65006;65007;65008;65009;65010;65011;65012;65013;65014 65007 12 DVITCEPQGSLIDTK Unmodified 1674.8135 0.81345137 3709 Q93074 MED12 Mediator of RNA polymerase II transcription subunit 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 66.375 66.426 2 0.0030557 76861 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 57.019 45.487 66244000 0 0 0 2406700 0 0 0 0 12343000 0 0 25632000 11762000 14100000 0 9554 3709 8700 81142;81143;81144;81145;81146 65015;65016 65016 2 DVKPENLLYTSK Unmodified 1405.7453 0.74529545 1560;2622 P49137;Q16644 MAPKAPK2;MAPKAPK3 MAP kinase-activated protein kinase 2;MAP kinase-activated protein kinase 3 no no 0 0 1 By MS/MS 10 0 1 1 56.934 57.546 3 0.026203 64729 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 23.098 7.7104 12433000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12433000 9555 1560;2622 8701 81147 65017 65017 1 DVKPSNILLDER Unmodified 1397.7514 0.75144346 206 O14733 MAP2K7 Dual specificity mitogen-activated protein kinase kinase 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 61.971 62.065 3 0.0075334 70755 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 33.968 23.043 56851000 0 0 0 4636700 3803500 0 7779700 5717100 0 6675100 6105700 8435400 5630700 0 8067100 9556 206 8702 81148;81149;81150;81151;81152;81153;81154;81155;81156 65018;65019 65018 2 DVKPSNILVNSR Unmodified 1340.7412 0.74121312 1373;2079 P36507;Q02750 MAP2K2;MAP2K1 Dual specificity mitogen-activated protein kinase kinase 2;Dual specificity mitogen-activated protein kinase kinase 1 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 1 2 2 1 2 2 2 2 2 2 48.472 48.636 2;3 0.0027285 54359 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.232 41.423 377720000 0 0 0 31217000 23116000 16462000 38337000 32097000 13765000 37625000 42504000 38116000 31115000 34157000 39209000 9557 1373;2079 8703 81157;81158;81159;81160;81161;81162;81163;81164;81165;81166;81167;81168;81169;81170;81171;81172;81173;81174;81175;81176;81177;81178 65020;65021;65022;65023;65024;65025;65026;65027;65028;65029;65030;65031 65031 10 DVLAHQVPNAK Unmodified 1190.6408 0.6407708 4776 Q9NZM5 GLTSCR2 Glioma tumor suppressor candidate region gene 2 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 32.277 32.464 2;3 0.00026373 34287 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.867 75.985 241530000 0 0 0 11720000 12670000 13093000 14685000 14771000 11766000 21919000 22213000 36541000 32317000 21966000 27873000 9558 4776 8704 81179;81180;81181;81182;81183;81184;81185;81186;81187;81188;81189;81190;81191;81192;81193;81194;81195;81196;81197;81198;81199;81200;81201;81202 65032;65033;65034;65035;65036;65037;65038;65039;65040;65041;65042 65036 7 DVLDGHLR Unmodified 923.48248 0.48247924 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 38.754 38.545 2 0.038333 43228 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 85.359 65.723 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9559 1029 8705 81203;81204 65043;65044 65044 2 DVLDGHLREK Unmodified 1180.62 0.62003536 1029 P15924 DSP Desmoplakin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 31.392 31.53 3 0.018177 34436 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 64.82 53.607 221500000 0 0 0 32398000 8280400 10437000 11214000 55446000 10603000 10510000 13236000 33790000 23951000 11637000 0 9560 1029 8706 81205;81206;81207;81208;81209;81210;81211;81212;81213;81214;81215 65045;65046;65047;65048;65049 65046 2 DVLDVYIEHR Unmodified 1257.6354 0.63535107 1334 P33993 MCM7 DNA replication licensing factor MCM7 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 70.686 70.881 3 0.028336 80768 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.634 34.168 28125000 0 0 0 0 0 3882900 2200000 0 1871700 2298600 3221400 3420700 2254200 0 8976000 9561 1334 8707 81216;81217;81218;81219;81220;81221;81222;81223 65050;65051 65051 2 DVLEGYNGTIFAYGQTSSGK Unmodified 2105.9906 0.99056411 1328 P33176;O60282 KIF5B;KIF5C Kinesin-1 heavy chain;Kinesin heavy chain isoform 5C yes no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.24 2 1 10 2 1 1 1 1 1 1 2 1 1 1 83.209 82.451 2;3 1.1478E-12 97463 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 120.3 105.62 61458000 0 28389000 1188200 816090 2173600 3193000 1329600 1305800 3768800 5502000 4782800 0 0 0 9009600 9562 1328 8708 81224;81225;81226;81227;81228;81229;81230;81231;81232;81233;81234;81235;81236 65052;65053;65054;65055;65056;65057;65058;65059;65060 65058 9 DVLETFTVK Unmodified 1050.5597 0.55972651 1130 P21926 CD9 CD9 antigen yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 74.333 73.651 2 0.0078297 85327 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 71.379 48.36 280510000 0 154010000 4977100 7267300 6004400 8818600 7328500 9743900 6175400 9218400 10200000 14755000 13133000 12243000 16637000 9563 1130 8709 81237;81238;81239;81240;81241;81242;81243;81244;81245;81246;81247;81248;81249;81250;81251 65061;65062;65063;65064;65065;65066;65067;65068;65069;65070 65070 10 DVLEVGELAK Unmodified 1071.5812 0.58119023 4310 Q9GZZ1 NAA50 N-alpha-acetyltransferase 50 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.89 2.77 5 31 2 2 1 2 2 3 3 4 4 3 3 4 1 1 1 71.17 70.884 1;2 6.7216E-10 80325 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 163.94 111 34758000000 106240000 1244500000 809990 1691600000 3070600000 3163800000 2605700000 2935000000 2532000000 4007100000 5825700000 7472400000 28516000 25710000 48181000 9564 4310 8710 81252;81253;81254;81255;81256;81257;81258;81259;81260;81261;81262;81263;81264;81265;81266;81267;81268;81269;81270;81271;81272;81273;81274;81275;81276;81277;81278;81279;81280;81281;81282;81283;81284;81285;81286;81287 65071;65072;65073;65074;65075;65076;65077;65078;65079;65080;65081;65082;65083;65084;65085;65086;65087;65088;65089;65090;65091;65092;65093;65094;65095;65096;65097;65098;65099;65100;65101;65102;65103;65104;65105;65106;65107;65108;65109;65110;65111;65112;65113;65114;65115;65116;65117;65118;65119;65120 65111 47 DVLGMAQDEMAQAFEDWNK Oxidation (M) 2212.9405 0.94051915 1680 P52209 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes yes 0 1 0 By MS/MS By MS/MS 2.25 0.433 3 1 2 2 98.209 92.134 2;3 1.743E-32 116241 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 126.4 117.35 141400000 51388000 90012000 0 0 0 0 0 0 0 0 0 0 0 0 0 9565 1680 8711 81288;81289;81290;81291 65121;65122;65123;65124 65123 2690;2691 4 DVLGMAQDEMAQAFEDWNK Unmodified 2196.9456 0.94560453 1680 P52209 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.29 0.452 5 2 1 5 1 99.718 95.233 2;3 1.6406E-13 117868 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.33 98.832 371370000 65612000 304510000 1249100 0 0 0 0 0 0 0 0 0 0 0 0 9566 1680 8711 81292;81293;81294;81295;81296;81297;81298 65125;65126;65127;65128;65129;65130;65131;65132;65133 65125 8 DVLILGGGDGGILCEIVK Unmodified 1826.9812 0.9811854 1701 P52788 SMS Spermine synthase yes yes 0 0 0 By MS/MS 2 0 1 1 98.782 90.652 2 1.3817E-26 116903 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 142.38 133.97 69415000 69415000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9567 1701 8712 81299 65134 65134 1 DVLLARPELK Unmodified 1152.6867 0.68665836 3056 Q7L7V1 DHX32 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 59.016 58.846 3 0.024977 74139 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 51.445 41.441 41425000 0 0 8847500 0 1544900 3131500 2630900 2947000 0 3636600 4424700 4009900 3235000 2971600 4045200 9568 3056 8713 81300;81301;81302;81303;81304;81305;81306;81307;81308;81309;81310 65135;65136;65137 65137 3 DVLLPWYNAYR Unmodified 1408.7139 0.71393574 1441 P41252 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 89.789 89.909 2 0.0017575 104107 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.856 60.026 9429900 0 0 0 0 0 1400000 0 976230 0 1280800 0 0 0 927720 4845100 9569 1441 8714 81311;81312;81313;81314;81315 65138;65139;65140 65140 3 DVLLQVDDER Unmodified 1200.5986 0.59863121 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.688 59.798 2 0.00090082 68118 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 129.1 110.79 178120000 0 0 0 11456000 12898000 17090000 12351000 7828900 10398000 17426000 17668000 26550000 16146000 12596000 15708000 9570 1356 8715 81316;81317;81318;81319;81320;81321;81322;81323;81324;81325;81326;81327 65141;65142;65143;65144;65145;65146;65147;65148;65149;65150;65151;65152 65142 12 DVLLQVDDERR Unmodified 1356.6997 0.69974224 1356 P35579 MYH9 Myosin-9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 1 2 2 2 1 2 2 2 2 50.815 50.958 2;3 8.0836E-48 57344 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 162.36 138.61 4535600000 0 0 0 262500000 302720000 509070000 229060000 269170000 338750000 395350000 270410000 786010000 412530000 304980000 455020000 9571 1356 8716 81328;81329;81330;81331;81332;81333;81334;81335;81336;81337;81338;81339;81340;81341;81342;81343;81344;81345;81346;81347;81348;81349 65153;65154;65155;65156;65157;65158;65159;65160;65161;65162;65163;65164;65165;65166;65167;65168;65169;65170;65171;65172;65173;65174;65175;65176;65177;65178;65179;65180;65181;65182;65183 65165 26 DVLLQVDDERRNAEQYK Unmodified 2090.0392 0.039245638 1356 P35579 MYH9 Myosin-9 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 6 21 3 1 2 1 1 2 2 1 2 2 2 2 2 2 2 58.491 57.523 3;4 2.1654E-27 65230 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 91.657 82.838 1118900000 220190000 17459000 10850000 5064000 13674000 94315000 47776000 10090000 136360000 75880000 65779000 118920000 60738000 73562000 168260000 9572 1356 8717 81350;81351;81352;81353;81354;81355;81356;81357;81358;81359;81360;81361;81362;81363;81364;81365;81366;81367;81368;81369;81370;81371;81372;81373;81374;81375;81376 65184;65185;65186;65187;65188;65189;65190;65191;65192;65193;65194;65195;65196;65197;65198;65199;65200;65201;65202;65203;65204;65205;65206;65207;65208;65209;65210;65211 65198 24 DVLLVAQGEMALEEFLK Unmodified 1903.9965 0.99650111 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS 2.4 0.49 3 2 3 2 102.89 97.262 2;3 6.1453E-35 122228 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 151.44 137.76 65034000 60989000 4045200 0 0 0 0 0 0 0 0 0 0 0 0 0 9573 2392 8718 81377;81378;81379;81380;81381 65212;65213;65214;65215 65214 4 DVLLVAQGEMALEEFLK Oxidation (M) 1919.9914 0.99141573 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 1 0 By MS/MS By MS/MS 2.25 0.433 3 1 2 2 102.21 96.735 2;3 5.6859E-46 121323 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 134.68 124.36 34241000 23817000 10424000 0 0 0 0 0 0 0 0 0 0 0 0 0 9574 2392 8718 81382;81383;81384;81385 65216;65217;65218 65218 3898 3 DVLNDTAPR Unmodified 999.49852 0.49852324 1528 P47897 QARS Glutamine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 32.377 32.538 2 0.0036487 35570 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 95.531 65.345 98479000 0 0 0 4773900 5047800 10867000 6923900 6791100 4363600 12165000 0 11171000 8171200 6796900 21407000 9575 1528 8719 81386;81387;81388;81389;81390;81391;81392;81393;81394;81395;81396 65219;65220;65221;65222;65223;65224;65225;65226;65227;65228;65229 65221 11 DVLNEDVRNLTLK Unmodified 1527.8257 0.82567103 455 O75116 ROCK2 Rho-associated protein kinase 2 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 77.285 73.626 3 0.024261 88192 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 40.577 29.307 127800000 0 123230000 4568700 0 0 0 0 0 0 0 0 0 0 0 0 9576 455 8720 81397;81398;81399 65230;65231 65230 2 DVLPTVDPTK Unmodified 1083.5812 0.58119023 3305 Q8N128 FAM177A1 Protein FAM177A1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 57.156 57.356 2 0.0081131 64915 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 60.828 49.607 44190000 0 0 0 0 0 0 3896800 4607100 5997400 7289300 8758600 0 6362000 7278500 0 9577 3305 8721 81400;81401;81402;81403;81404;81405;81406 65232;65233;65234 65232 3 DVLQAAAAEHQDQGQEVNGEVR Unmodified 2363.1102 0.11017875 2155 Q08378 GOLGA3 Golgin subfamily A member 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 52.84 52.796 3 2.4305E-43 59878 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 109.85 102.01 51770000 0 0 0 5114500 4475400 8681600 6563100 5545600 4053200 8522700 0 0 0 8814100 0 9578 2155 8722 81407;81408;81409;81410;81411;81412;81413;81414 65235;65236;65237;65238;65239;65240;65241;65242 65236 8 DVLQAETSQQLCCQK Unmodified 1806.824 0.82403283 5032 Q9UNH7 SNX6 Sorting nexin-6;Sorting nexin-6, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 55.134 49.328 2 1.3682E-41 63727 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 151.13 135.24 45962000 0 45962000 0 0 0 0 0 0 0 0 0 0 0 0 0 9579 5032 8723 81415;81416 65243;65244 65243 2 DVLQGELEAVK Unmodified 1199.6398 0.63976774 391 O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 73.152 67.781 2 0.00095336 85958 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.111 70.37 432440000 6405400 424370000 1660400 0 0 0 0 0 0 0 0 0 0 0 0 9580 391 8724 81417;81418;81419;81420 65245;65246;65247 65245 2 DVLQHVDSMQK Unmodified 1298.6289 0.62888548 4045 Q99685 MGLL Monoglyceride lipase yes yes 0 0 0 By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 42.763 42.891 3 0.037159 47724 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 28.327 21.288 61169000 0 0 0 0 5876800 9740600 5189500 5280000 3693200 6641900 9430400 0 8971700 6345200 0 9581 4045 8725 81421;81422;81423;81424;81425;81426;81427;81428;81429 65248 65248 1 DVLQSASGQLPATAALNEVGIYK Unmodified 2344.2274 0.22744034 2899 Q6NUQ1 RINT1 RAD50-interacting protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 93.46 88.549 3 8.6247E-05 109945 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 35.79 32.908 11727000 0 11727000 0 0 0 0 0 0 0 0 0 0 0 0 0 9582 2899 8726 81430 65249;65250 65249 2 DVLREAEILHK Unmodified 1321.7354 0.73539946 320 O43353 RIPK2 Receptor-interacting serine/threonine-protein kinase 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 65.82 58.713 3 0.018976 78318 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 38.875 29.187 15669000 8160200 7508600 0 0 0 0 0 0 0 0 0 0 0 0 0 9583 320 8727 81431;81432 65251 65251 1 DVLSSSLEEQK Unmodified 1233.6089 0.60886155 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.43 2.06 1 13 1 2 1 1 1 1 1 1 1 1 1 1 1 50.567 50.721 2 2.1381E-07 57284 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 166.33 154.48 467870000 0 0 0 34255000 29100000 25580000 43942000 35885000 51914000 39707000 37881000 44422000 39795000 28741000 56647000 9584 2556 8728 81433;81434;81435;81436;81437;81438;81439;81440;81441;81442;81443;81444;81445;81446 65252;65253;65254;65255;65256;65257;65258;65259;65260;65261;65262;65263;65264;65265 65254 13 DVLSVAFSSDNR Unmodified 1308.631 0.63099397 1950 P63244 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 74.777 75.003 2 2.5847E-05 86522 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 111.06 102.84 49812000 0 0 0 0 0 0 0 3463500 0 0 7547800 10297000 0 6458400 22046000 9585 1950 8729 81447;81448;81449;81450;81451;81452 65266;65267;65268;65269;65270 65267 5 DVLTSTYGATAETLSTSTTTHVTK Unmodified 2484.2231 0.22314282 4397 Q9H4G0 EPB41L1 Band 4.1-like protein 1 yes yes 0 0 0 By MS/MS 3 0 1 1 79.429 76.058 3 4.3105E-16 91227 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 90.475 76.744 10641000 0 10641000 0 0 0 0 0 0 0 0 0 0 0 0 0 9586 4397 8730 81453 65271 65271 1 DVLVGADSVR Unmodified 1029.5455 0.54547343 363 O43760 SYNGR2 Synaptogyrin-2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 47.058 47.053 2 0.02179 53717 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 46.462 32.814 23184000 0 0 0 5641800 3163200 0 3630700 0 0 0 4357300 0 3832500 2559000 0 9587 363 8731 81454;81455;81456;81457;81458;81459 65272 65272 1 DVLYLMNSIPLPQK Oxidation (M) 1645.8749 0.87492941 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 1 2 2 2 2 2 2 2 2 2 85.084 85.208 2 5.5551E-12 98725 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 101.95 87.836 111000000 0 0 0 0 3582500 3898200 6053500 10021000 5028900 15560000 14188000 19336000 9850500 10329000 13155000 9588 3023 8732 81460;81461;81462;81463;81464;81465;81466;81467;81468;81469;81470;81471;81472;81473;81474;81475;81476;81477;81478;81479 65273;65274;65275;65276;65277;65278;65279;65280;65281;65282;65283 65283 4624 11 DVLYLMNSIPLPQK Unmodified 1629.88 0.88001479 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 94.22 94.322 2 0.00082953 109656 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 63.283 48.593 10297000 0 0 0 0 707420 0 0 1350600 0 1849600 1342200 1164500 0 725140 3157100 9589 3023 8732 81480;81481;81482;81483;81484;81485;81486 65284;65285;65286;65287;65288 65284 5 DVLYPSLK Unmodified 933.51713 0.51713341 1421 P40855 PEX19 Peroxisomal biogenesis factor 19 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.08 3.33 2 1 9 2 1 1 1 1 1 1 1 1 1 1 61.986 60.931 2 0.011003 69972 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 77.923 38.26 205750000 0 151930000 3097600 0 3025100 0 4173800 0 3227000 4514600 7875100 8584800 4600600 6022200 8704000 9590 1421 8733 81487;81488;81489;81490;81491;81492;81493;81494;81495;81496;81497;81498 65289;65290;65291;65292;65293;65294;65295;65296 65294 8 DVMDALILK Unmodified 1016.5576 0.55761802 3314 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 84.481 83.783 2 0.028187 96769 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.097 33.716 127400000 0 91385000 4431900 0 0 0 0 2639100 2454100 4626800 0 5291100 2632400 4613300 9323000 9591 3314 8734 81499;81500;81501;81502;81503;81504;81505;81506;81507 65297;65298 65298 2 DVMDSTTTQK Oxidation (M) 1140.4969 0.49686826 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.31 2.4 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 14.357 14.876 2 8.7832E-09 92015 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 157.91 140.55 85176000 29835000 0 0 2348500 3126600 4040900 3547000 3311900 3924700 5723000 6202300 5224600 5475100 6574500 5841100 9592 2930 8735 81508;81509;81510;81511;81512;81513;81514;81515;81516;81517;81518;81519;81520 65299;65300;65301;65302;65303;65304;65305;65306;65307;65308;65309 65303 4551 11 DVMDSTTTQK Unmodified 1124.502 0.50195363 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.34 1 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 23.073 23.034 2 0.0014533 92541 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 110.87 78.937 135070000 24934000 5468500 0 4584100 5383500 8918900 5801600 8073800 5079700 8280300 11577000 10111000 10186000 10222000 16453000 9593 2930 8735 81521;81522;81523;81524;81525;81526;81527;81528;81529;81530;81531;81532;81533;81534;81535 65310;65311;65312;65313;65314;65315;65316;65317;65318;65319;65320;65321;65322 65315 13 DVMEDAVEDRLDR Oxidation (M) 1577.6991 0.69914989 2587 Q15833 STXBP2 Syntaxin-binding protein 2 yes yes 0 1 1 By MS/MS 10 0 1 1 44.759 44.81 3 0.0038667 50451 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 42.789 31.527 4890900 0 0 0 0 0 4890900 0 0 0 0 0 0 0 0 0 9594 2587 8736 81536 65323 65323 4234 1 DVMEGVTVDDHMMK Unmodified 1605.6837 0.68369952 2721 Q5BKZ1 ZNF326 DBIRD complex subunit ZNF326 yes yes 0 0 0 By MS/MS 10 0 1 1 63.302 63.865 3 0.04597 72318 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 17.867 14.394 5432200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5432200 9595 2721 8737 81537 65324 65324 1 DVMPEVNK Unmodified 930.44807 0.44806757 829 P06744 GPI Glucose-6-phosphate isomerase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.3 1 1 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 40.035 39.888 2 0.0024533 93596 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 124.37 81.307 1641500000 86401000 1202400000 0 3466000 1768100 0 1776800 2822500 2339100 4196600 56012000 34540000 3919600 28795000 213000000 9596 829 8738 81538;81539;81540;81541;81542;81543;81544;81545;81546;81547;81548;81549;81550;81551 65325;65326;65327;65328;65329;65330 65329 6 DVMPEVNK Oxidation (M) 946.44298 0.44298219 829 P06744 GPI Glucose-6-phosphate isomerase yes yes 0 1 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.42 3.66 3 1 8 1 2 1 1 1 1 1 1 1 1 1 17.089 16.021 2 0.0022238 21315 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 120.65 71.055 332150000 63306000 180620000 4231600 0 1525600 1204000 1673300 0 0 1869600 18222000 0 2485100 12013000 44995000 9597 829 8738 81552;81553;81554;81555;81556;81557;81558;81559;81560;81561;81562;81563 65331;65332;65333;65334;65335 65334 1004 5 DVNAAIAAIK Unmodified 984.5604 0.56039521 1962 P68366 TUBA4A Tubulin alpha-4A chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.62 3.03 1 3 1 24 2 2 1 2 2 2 2 2 2 2 2 2 2 2 2 64.537 64.016 1;2 0.0016854 71413 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 89.355 62.101 4213000000 62516000 1835000000 9708700 146290000 116100000 159700000 164260000 216450000 110880000 210810000 235990000 279050000 195020000 192750000 278400000 9598 1962 8739 81564;81565;81566;81567;81568;81569;81570;81571;81572;81573;81574;81575;81576;81577;81578;81579;81580;81581;81582;81583;81584;81585;81586;81587;81588;81589;81590;81591;81592 65336;65337;65338;65339;65340;65341;65342;65343;65344;65345;65346;65347;65348;65349;65350;65351;65352;65353;65354;65355;65356;65357;65358;65359;65360;65361 65358 25 DVNAAIATIK Unmodified 1014.571 0.5709599 1961;3031;4093 P68363;Q71U36;P0DPH8;P0DPH7;Q6PEY2;Q9BQE3 TUBA1B;TUBA1A;TUBA3E;TUBA1C Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-1C chain no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.7 3.86 11 3 19 3 8 3 4 2 2 1 1 1 1 2 1 1 1 2 58.008 56.575 1;2 0.00093981 64483 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 111.46 82.354 57368000000 1282900000 14587000000 144040000 2606300000 2514300000 3051400000 3116600000 2819100000 2297800000 3889600000 3864200000 4245900000 3821100000 3627500000 5500900000 9599 1961;3031;4093 8740 81593;81594;81595;81596;81597;81598;81599;81600;81601;81602;81603;81604;81605;81606;81607;81608;81609;81610;81611;81612;81613;81614;81615;81616;81617;81618;81619;81620;81621;81622;81623;81624;81625 65362;65363;65364;65365;65366;65367;65368;65369;65370;65371;65372;65373;65374;65375;65376;65377;65378;65379;65380;65381;65382;65383;65384;65385;65386;65387;65388;65389;65390;65391;65392;65393;65394;65395;65396;65397;65398;65399;65400;65401;65402;65403;65404;65405;65406;65407;65408;65409;65410;65411;65412;65413;65414;65415;65416;65417;65418;65419;65420;65421;65422;65423;65424;65425;65426;65427;65428;65429;65430;65431;65432;65433;65434;65435;65436;65437;65438;65439;65440;65441;65442;65443;65444;65445;65446;65447;65448;65449;65450;65451;65452;65453;65454;65455;65456 65374 94 DVNALPETLSDALR Unmodified 1512.7784 0.77838649 4641 Q9NU22 MDN1 Midasin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 85.9 86.033 2 0.0013394 99680 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 59.198 48.89 32753000 0 0 0 0 0 2972400 3104700 3954100 3010600 4056100 0 0 4150500 4434000 7070700 9600 4641 8741 81626;81627;81628;81629;81630;81631;81632;81633 65457;65458;65459;65460 65457 3 DVNCLEPWLIK Unmodified 1385.7013 0.70132214 4421 Q9H6S0 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 86.023 86.217 2 0.010913 106441 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.496 74.676 2703800 0 0 0 0 0 0 0 2703800 0 0 0 0 0 0 0 9601 4421 8742 81634;81635 65461;65462 65461 2 DVNDTGSFKPPEVASK Unmodified 1689.821 0.82097959 2136 Q07157 TJP1 Tight junction protein ZO-1 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 55.017 49.67 3 0.00012028 61576 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 90.348 90.348 66280000 0 66280000 0 0 0 0 0 0 0 0 0 0 0 0 0 9602 2136 8743 81636;81637 65463 65463 1 DVNEDPGEDVALLSVSFEDTEATQVYPK Unmodified 3066.4193 0.41933603 4731 Q9NXR7 BRE BRCA1-A complex subunit BRE yes yes 0 0 0 By MS/MS By matching 2.67 0.471 1 2 2 1 96.729 91.758 3 9.4192E-48 115014 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 112.8 106.3 46673000 39782000 6891400 0 0 0 0 0 0 0 0 0 0 0 0 0 9603 4731 8744 81638;81639;81640 65464;65465 65465 2 DVNEGETSDGVRK Unmodified 1404.6481 0.6481006 5245 Q9Y5Q9 GTF3C3 General transcription factor 3C polypeptide 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.4 2.04 1 1 23 2 2 2 2 2 2 2 2 1 2 2 2 2 10.927 10.777 2;3 3.2253E-28 9030 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 148.56 129.31 540710000 0 82834000 0 29629000 23376000 39983000 36751000 17864000 19575000 34425000 41181000 60499000 47158000 36495000 70944000 9604 5245 8745 81641;81642;81643;81644;81645;81646;81647;81648;81649;81650;81651;81652;81653;81654;81655;81656;81657;81658;81659;81660;81661;81662;81663;81664;81665 65466;65467;65468;65469;65470;65471;65472;65473;65474;65475;65476;65477;65478;65479;65480;65481;65482 65471 13 DVNELRQELER Unmodified 1399.7056 0.7055559 4641 Q9NU22 MDN1 Midasin yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 59.845 59.962 3 0.040205 67740 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.077 22.846 73844000 0 0 0 4174300 5082600 0 4393600 5823200 6217100 5608000 7460200 8812500 8740300 8692100 8840400 9605 4641 8746 81666;81667;81668;81669;81670;81671;81672;81673;81674;81675;81676 65483 65483 0 DVNERNTVK Unmodified 1073.5465 0.54653606 1448 P42224 STAT1 Signal transducer and activator of transcription 1-alpha/beta yes yes 0 0 1 By MS/MS 3 0 1 1 7.7665 4.4081 2 0.030455 6126 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 123.35 84.031 21112000 0 21112000 0 0 0 0 0 0 0 0 0 0 0 0 0 9606 1448 8747 81677 65484 65484 0 DVNFEFPEFQL Unmodified 1383.6347 0.63468237 1871 P62081 RPS7 40S ribosomal protein S7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.38 3.93 1 3 2 7 3 2 1 1 1 1 1 1 1 1 98.705 97.461 2 2.3902E-11 118489 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 153.24 125.5 1324000000 164280000 1133600000 5503400 0 1290400 0 992990 1318300 0 5313800 4680800 0 0 2290000 4808900 9607 1871 8748 81678;81679;81680;81681;81682;81683;81684;81685;81686;81687;81688;81689;81690 65485;65486;65487;65488;65489;65490;65491;65492;65493;65494;65495;65496 65494 10 DVNGELIAVQR Unmodified 1212.6463 0.64625011 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.455 58.57 2 0.00029757 66606 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 90.108 68.645 179890000 0 0 0 10325000 9590100 13632000 12965000 10950000 8346800 15536000 17805000 21456000 19774000 13174000 26336000 9608 3676 8749 81691;81692;81693;81694;81695;81696;81697;81698;81699;81700;81701;81702 65497;65498;65499;65500;65501;65502;65503;65504;65505;65506;65507;65508 65499 11 DVNGPEPLNSR Unmodified 1196.5786 0.57856447 4042 Q99653 CHP1 Calcineurin B homologous protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 32.8 33.002 2 0.0026758 35217 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.595 51.445 27832000 0 0 0 0 2311500 0 3159500 4574100 2597200 0 2946200 0 0 3591700 8652200 9609 4042 8750 81703;81704;81705;81706;81707;81708;81709 65509;65510 65509 2 DVNGQESTPGIVPDAVQVHTEEQQK Unmodified 2704.294 0.29401635 3436 Q8NEZ4 KMT2C Histone-lysine N-methyltransferase 2C yes yes 0 0 0 By MS/MS 3 0 1 1 68.94 64.279 3 0.0084943 78701 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 25.823 22.256 4709500 0 4709500 0 0 0 0 0 0 0 0 0 0 0 0 0 9610 3436 8751 81710 65511 65511 1 DVNLASCAADGSVK Unmodified 1405.6507 0.65074314 303 O43172 PRPF4 U4/U6 small nuclear ribonucleoprotein Prp4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.978 47.145 2 7.3342E-19 52559 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 138.45 129.92 506320000 0 0 0 31579000 32895000 29215000 33082000 36860000 26897000 43535000 51406000 50246000 61311000 40788000 68506000 9611 303 8752 81711;81712;81713;81714;81715;81716;81717;81718;81719;81720;81721;81722 65512;65513;65514;65515;65516;65517;65518;65519;65520;65521;65522;65523;65524 65521 13 DVNQQEFVR Unmodified 1133.5465 0.54653606 1401 P39019 RPS19 40S ribosomal protein S19 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 37.399 37.594 2 1.2208E-05 41519 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 157.86 125.02 1312300000 0 0 0 65287000 87925000 0 62496000 80425000 56191000 104710000 181860000 149440000 189770000 160020000 174150000 9612 1401 8753 81723;81724;81725;81726;81727;81728;81729;81730;81731;81732;81733 65525;65526;65527;65528;65529;65530;65531;65532;65533;65534 65530 6 DVNQQEFVRALAAFLK Unmodified 1847.9894 0.98938232 1401 P39019 RPS19 40S ribosomal protein S19 yes yes 0 0 1 By MS/MS 3 0 1 1 100.46 97.056 3 0.019028 116479 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 35.659 26.253 3833600 0 3833600 0 0 0 0 0 0 0 0 0 0 0 0 0 9613 1401 8754 81734 65535 65535 1 DVNSSSPVMLAFK Oxidation (M) 1409.6861 0.68606601 4031 Q99598 TSNAX Translin-associated protein X yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 7.4 3.68 4 1 10 1 3 1 1 1 1 1 1 1 1 1 1 1 74.803 73.34 2 0.00042201 85062 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 74.841 50.065 253370000 7178800 186110000 4565000 4780600 5421000 8254000 4756700 0 4742500 0 7828800 9064300 4833100 5837300 0 9614 4031 8755 81735;81736;81737;81738;81739;81740;81741;81742;81743;81744;81745;81746;81747;81748;81749 65536;65537;65538;65539;65540;65541;65542;65543;65544;65545;65546;65547 65538 5529 12 DVNSSSPVMLAFK Unmodified 1393.6912 0.69115139 4031 Q99598 TSNAX Translin-associated protein X yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81.293 80.425 2 4.0812E-10 99083 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.67 80.197 773470000 19779000 645730000 0 3421300 3917900 8215400 5001800 5776800 4241200 9166100 13832000 10168000 4746800 8745500 30733000 9615 4031 8755 81750;81751;81752;81753;81754;81755;81756;81757;81758;81759;81760;81761;81762;81763 65548;65549;65550;65551;65552;65553;65554;65555;65556;65557;65558;65559 65551 11 DVNVNFEK Unmodified 963.46616 0.46616048 2506 Q15185 PTGES3 Prostaglandin E synthase 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.11 3.81 1 4 2 12 2 5 1 1 1 1 1 1 1 1 1 1 1 1 42.725 41.292 2 0.011537 49241 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 109.01 75.462 11685000000 416960000 3676400000 0 335050000 391050000 433050000 494440000 548040000 354300000 654290000 1019300000 755210000 798480000 634930000 1173200000 9616 2506 8756 81764;81765;81766;81767;81768;81769;81770;81771;81772;81773;81774;81775;81776;81777;81778;81779;81780;81781;81782 65560;65561;65562;65563;65564;65565;65566;65567;65568;65569;65570;65571;65572;65573;65574;65575;65576;65577;65578;65579 65569 18 DVNVVVVEGGPK Unmodified 1210.6558 0.65575216 323 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 56.947 56.688 2 1.6488E-06 65319 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 131.28 120.53 253920000 0 1866500 0 12591000 17543000 20028000 19744000 19662000 19961000 19333000 24061000 34976000 17858000 19283000 27012000 9617 323 8757 81783;81784;81785;81786;81787;81788;81789;81790;81791;81792;81793;81794;81795 65580;65581;65582;65583;65584;65585;65586;65587;65588;65589;65590;65591;65592;65593;65594;65595;65596;65597;65598;65599 65599 20 DVPAYSQDTFK Unmodified 1269.5877 0.58773217 788 P04843 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 50.139 50.083 2 0.0068754 56523 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 52.79 37.128 65856000 0 0 0 8739300 7999400 0 8665000 11810000 7946300 9290500 0 0 0 11406000 0 9618 788 8758 81796;81797;81798;81799;81800;81801;81802 65600;65601;65602;65603;65604 65600 5 DVPDHAVLEMK Oxidation (M) 1268.6071 0.60708741 4162 Q9BUJ2 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 1 2 2 1 2 2 2 2 2 2 36.957 37.222 2;3 0.0017856 41587 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.435 47.34 178950000 0 0 0 4424200 11704000 19420000 0 12549000 4689100 22616000 17687000 25475000 23959000 13025000 23406000 9619 4162 8759 81803;81804;81805;81806;81807;81808;81809;81810;81811;81812;81813;81814;81815;81816;81817;81818;81819;81820;81821 65605;65606 65605 5650 2 DVPDHAVLEMK Unmodified 1252.6122 0.61217279 4162 Q9BUJ2 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 3 24 1 1 1 2 2 2 2 2 2 2 2 2 2 2 2 52.879 52.344 2;3 0.0020851 58937 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 55.452 45.081 655850000 11241000 157580000 5105800 23489000 21608000 34918000 35183000 28607000 28965000 43599000 46019000 53296000 43990000 42600000 79653000 9620 4162 8759 81822;81823;81824;81825;81826;81827;81828;81829;81830;81831;81832;81833;81834;81835;81836;81837;81838;81839;81840;81841;81842;81843;81844;81845;81846;81847;81848 65607;65608;65609;65610;65611;65612;65613;65614;65615;65616;65617;65618;65619;65620;65621;65622;65623;65624;65625;65626;65627;65628;65629 65619 20 DVPDSQQHPAPEK Unmodified 1446.6739 0.67392142 441 O60885 BRD4 Bromodomain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.69 2.88 3 2 24 1 4 2 2 2 2 2 2 2 2 2 2 2 2 15.603 15.105 2;3 2.1226E-05 14187 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.46 73.874 420240000 3484000 172840000 0 13692000 7196000 9606000 19611000 11157000 10642000 21549000 27165000 26050000 26549000 27697000 43010000 9621 441 8760 81849;81850;81851;81852;81853;81854;81855;81856;81857;81858;81859;81860;81861;81862;81863;81864;81865;81866;81867;81868;81869;81870;81871;81872;81873;81874;81875;81876;81877 65630;65631;65632;65633;65634;65635;65636;65637;65638;65639;65640;65641;65642;65643;65644;65645;65646;65647;65648;65649 65638 19 DVPEDVAQEMVESGYVCEGDHK Unmodified 2492.0472 0.047169066 4393 Q9H4A3 WNK1 Serine/threonine-protein kinase WNK1 yes yes 0 0 0 By MS/MS 10 0 1 1 81.301 81.517 3 0.0010207 93957 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 34.709 32.202 14063000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14063000 9622 4393 8761 81878 65650 65650 1 DVPFGFQTVTSDVNK Unmodified 1652.8046 0.80460124 1383 P36952 SERPINB5 Serpin B5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.22 3.82 1 6 1 15 2 4 2 1 1 1 1 1 1 1 1 1 2 2 2 83.521 82.64 2;3 1.1157E-41 96371 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 151.55 140.96 10332000000 128900000 8958100000 38769000 40785000 41852000 137000000 66174000 67633000 48662000 139800000 120070000 107590000 56575000 120330000 259660000 9623 1383 8762 81879;81880;81881;81882;81883;81884;81885;81886;81887;81888;81889;81890;81891;81892;81893;81894;81895;81896;81897;81898;81899;81900;81901 65651;65652;65653;65654;65655;65656;65657;65658;65659;65660;65661;65662;65663;65664;65665;65666;65667;65668;65669;65670 65660 18 DVPLLPSDVK Unmodified 1081.6019 0.60192568 4513 Q9HCE1 MOV10 Putative helicase MOV-10 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.063 72.134 2 0.042395 83128 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 39.305 27.111 69918000 0 0 0 4227100 4254600 6762600 3989300 4939800 4338800 5873000 6031200 8108500 6833800 6510500 8048900 9624 4513 8763 81902;81903;81904;81905;81906;81907;81908;81909;81910;81911;81912;81913 65671;65672 65672 2 DVPLLPSLDYEK Unmodified 1387.7235 0.72349737 3083 Q7Z3E5 ARMC9 LisH domain-containing protein ARMC9 yes yes 0 0 0 By MS/MS 2 0 1 1 89.271 84.398 2 0.0011111 104949 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.171 77.535 30089000 0 30089000 0 0 0 0 0 0 0 0 0 0 0 0 0 9625 3083 8764 81914 65673 65673 1 DVPLTAEEVEFVVEK Unmodified 1702.8665 0.8665328 4669 Q9NVI1 FANCI Fanconi anemia group I protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89.608 88.585 2 0.00054774 109767 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.902 78.124 121300000 21753000 70380000 2236700 0 1462000 2527700 1185700 1669900 1884200 4576600 2806400 2588500 1083600 2201800 4948700 9626 4669 8765 81915;81916;81917;81918;81919;81920;81921;81922;81923;81924;81925;81926;81927;81928 65674;65675;65676;65677;65678;65679;65680 65677 7 DVPNHGFR Unmodified 940.45151 0.45151346 2120 Q05BQ5 MBTD1 MBT domain-containing protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 18.611 18.962 2 0.035132 19232 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 52.683 23.345 11714000 0 0 0 0 0 0 0 1311600 1154800 0 0 2100100 2046700 1643300 3457300 9627 2120 8766 81929;81930;81931;81932;81933;81934 65681 65681 1 DVPNNQLR Unmodified 954.48829 0.4882929 3120;4251 Q7Z739;Q9BYJ9 YTHDF3;YTHDF1 YTH domain-containing family protein 3;YTH domain-containing family protein 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.474 20.678 2 0.0074285 20422 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.673 71.688 564350000 0 0 0 22933000 19608000 38476000 47726000 34447000 31503000 61388000 60554000 43525000 47423000 63140000 93631000 9628 3120;4251 8767 81935;81936;81937;81938;81939;81940;81941;81942;81943;81944;81945;81946 65682;65683;65684;65685;65686;65687;65688;65689;65690;65691;65692;65693;65694;65695 65686 10 DVPNNVDLSK Unmodified 1099.551 0.55095274 2594 Q15911;Q86UP3 ZFHX3;ZFHX4 Zinc finger homeobox protein 3;Zinc finger homeobox protein 4 yes no 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 37.457 37.571 2 0.015017 41675 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 50.353 29.787 11029000 0 0 0 0 2676200 0 0 2858500 0 0 3081900 0 0 2412200 0 9629 2594 8768 81947;81948;81949;81950 65696;65697 65696 2 DVPNPNQDDDDDEGFSFNPLK Unmodified 2376.9982 0.99822826 2170 Q09161 NCBP1 Nuclear cap-binding protein subunit 1 yes yes 0 0 0 By MS/MS By MS/MS 2.2 0.4 4 1 2 3 85.816 80.007 2;3 3.1246E-06 102117 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.944 81.961 79491000 32311000 47180000 0 0 0 0 0 0 0 0 0 0 0 0 0 9630 2170 8769 81951;81952;81953;81954;81955 65698;65699;65700;65701 65700 3 DVPPLSETEATPVPIK Unmodified 1691.8982 0.89816728 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.34 1 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 79.95 79.491 2 6.2634E-06 89476 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 79.492 64.29 803390000 33221000 201220000 0 26938000 32620000 34742000 37711000 30377000 23281000 49521000 67027000 78764000 44419000 55310000 88237000 9631 1226 8770 81956;81957;81958;81959;81960;81961;81962;81963;81964;81965;81966;81967;81968;81969;81970 65702;65703;65704;65705;65706;65707;65708;65709;65710;65711;65712;65713;65714;65715;65716 65702 15 DVPPSINTTNIDTLLVATDQTER Unmodified 2512.2657 0.26567634 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 91.438 91.582 3 0.032872 106454 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 19.044 11.684 11941000 0 0 0 0 0 0 0 0 0 4125000 1859800 2392800 0 0 3563900 9632 19 8771 81971;81972;81973;81974 65717 65717 1 DVPRPILLGASAPLK Unmodified 1545.9243 0.92426287 166 O00534 VWA5A von Willebrand factor A domain-containing protein 5A yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 79.752 79.834 3 0.0074408 92320 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 27.208 21.834 25580000 0 0 0 2288600 0 2620900 1998400 1702700 1929100 3069200 2679400 0 1649500 2624000 5018100 9633 166 8772 81975;81976;81977;81978;81979;81980;81981;81982;81983;81984 65718;65719 65718 2 DVPSSEQPELFLK Unmodified 1487.7508 0.75077476 2610 Q16537 PPP2R5E Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.748 76.806 2 0.00087449 88950 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 68.893 51.029 78062000 0 0 0 3426300 3303500 9158300 5430600 3883500 4560600 7662200 8863300 7120600 6946700 6047100 11659000 9634 2610 8773 81985;81986;81987;81988;81989;81990;81991;81992;81993;81994;81995;81996 65720;65721;65722;65723;65724;65725;65726;65727;65728;65729;65730;65731;65732 65729 13 DVPSSLSCLPASGSMCGSLIESK Unmodified 2381.0913 0.091282487 3086 Q7Z3T8 ZFYVE16 Zinc finger FYVE domain-containing protein 16 yes yes 0 0 0 By MS/MS 2 0 1 1 85.983 81.209 3 0.00052042 100960 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 48.5 41.054 36497000 0 36497000 0 0 0 0 0 0 0 0 0 0 0 0 0 9635 3086 8774 81997 65733 65733 1 DVPTGGIFQLR Unmodified 1201.6455 0.64552182 4576 Q9NQT8 KIF13B Kinesin-like protein KIF13B yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 81.189 81.127 2 0.012158 94198 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 47.823 35.976 10469000 0 0 0 2833400 0 0 0 0 0 0 0 4474700 3161300 0 0 9636 4576 8775 81998;81999;82000 65734 65734 1 DVPVAEEVSALFAGELNPVAPK Unmodified 2251.1736 0.17361385 193 O14617 AP3D1 AP-3 complex subunit delta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 1 4 1 101.44 96.957 2;3 0.0023676 120492 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 34.658 26.854 257330000 8042700 246450000 2839300 0 0 0 0 0 0 0 0 0 0 0 0 9637 193 8776 82001;82002;82003;82004;82005;82006 65735;65736;65737;65738;65739;65740 65739 6 DVPVEALTTVK Unmodified 1170.6496 0.64960415 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 70.638 70.054 2 0.0052806 79550 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 59.426 49.195 448380000 0 338850000 0 3396600 4766200 9826500 5998500 7119700 6569400 9969300 11340000 11893000 10196000 11988000 16467000 9638 2775 8777 82007;82008;82009;82010;82011;82012;82013;82014;82015;82016;82017;82018;82019;82020 65741;65742;65743;65744;65745;65746;65747;65748;65749;65750 65747 10 DVPVVAILGSGGGFR Unmodified 1442.7882 0.78816332 1522 P47712 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 91.437 91.509 2;3 3.5514E-14 106312 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 99.5 81.636 216190000 0 0 0 4487900 12271000 16563000 9771200 21963000 12167000 26462000 20235000 22211000 15320000 16159000 38584000 9639 1522 8778 82021;82022;82023;82024;82025;82026;82027;82028;82029;82030;82031;82032;82033;82034;82035;82036;82037;82038;82039;82040;82041;82042;82043;82044 65751;65752;65753;65754;65755;65756;65757;65758;65759;65760;65761;65762;65763;65764;65765 65751 15 DVPYPPPLSPAIEAIQK Unmodified 1833.9877 0.98765098 3369 Q8N8N7 PTGR2 Prostaglandin reductase 2 yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 92.476 88.129 2;3 0.00098307 109428 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.892 72.315 132840000 0 132840000 0 0 0 0 0 0 0 0 0 0 0 0 0 9640 3369 8779 82045;82046;82047 65766;65767;65768;65769 65767 4 DVQDELRIK Unmodified 1114.5982 0.59823728 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 0 1 By MS/MS By MS/MS By matching 2.33 0.471 2 1 1 1 1 53.548 47.893 2 0.022444 59534 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 153.24 104.68 51030000 15267000 28395000 7367700 0 0 0 0 0 0 0 0 0 0 0 0 9641 643 8780 82048;82049;82050 65770;65771 65770 1 DVQDSLTVSNEAQTAK Unmodified 1704.8166 0.81662249 1705 P52907 CAPZA1 F-actin-capping protein subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.63 3.17 2 1 16 3 2 2 1 1 1 1 1 1 1 2 2 1 53.153 53.368 2;3 7.2027E-149 52323 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 267.37 250 877460000 118550000 0 0 69572000 54274000 55481000 46070000 40292000 36508000 65011000 87890000 86792000 75819000 61287000 79918000 9642 1705 8781 82051;82052;82053;82054;82055;82056;82057;82058;82059;82060;82061;82062;82063;82064;82065;82066;82067;82068;82069 65772;65773;65774;65775;65776;65777;65778;65779;65780;65781;65782;65783;65784;65785;65786;65787;65788;65789;65790;65791;65792;65793 65789 20 DVQEIFR Unmodified 905.46068 0.46068117 2347;118 O00148;Q13838 DDX39A;DDX39B ATP-dependent RNA helicase DDX39A;Spliceosome RNA helicase DDX39B no no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.532 55.661 2 0.0174 62178 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 114.02 54.022 1446200000 0 0 0 71019000 51966000 188280000 89610000 74569000 56189000 164360000 142020000 170990000 101650000 102490000 233090000 9643 118;2347 8782 82070;82071;82072;82073;82074;82075;82076;82077;82078;82079;82080;82081 65794;65795;65796;65797;65798;65799;65800;65801;65802;65803;65804 65797 10 DVQELLTQYTK Unmodified 1336.6874 0.68744622 1826 P61011 SRP54 Signal recognition particle 54 kDa protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.19 81.25 2 3.0585E-47 94257 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 185.14 128.41 407420000 0 0 0 15291000 21832000 33289000 23236000 36951000 22036000 44178000 42858000 51643000 37225000 25124000 53755000 9644 1826 8783 82082;82083;82084;82085;82086;82087;82088;82089;82090;82091;82092;82093 65805;65806;65807;65808;65809;65810;65811;65812;65813;65814;65815;65816;65817 65814 13 DVQETLMPQVLTTLEEDSK Oxidation (M) 2191.0566 0.056594765 3204 Q86Y56 DNAAF5 Dynein assembly factor 5, axonemal yes yes 0 1 0 By matching By MS/MS By matching 10 0 3 1 1 1 87.274 87.421 2 0.0010727 101440 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 43.382 27.995 9112500 0 0 0 0 0 0 0 0 0 3505800 2488800 3117800 0 0 0 9645 3204 8784 82094;82095;82096 65818 65818 4822 1 DVQGWGENDRGVSFTFGADVVSK Unmodified 2469.1561 0.15606631 1873 P62140 PPP1CB Serine/threonine-protein phosphatase PP1-beta catalytic subunit yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 87.467 81.596 3 0.00055829 104345 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.266 48.173 16540000 16540000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9646 1873 8785 82097;82098 65819;65820 65820 2 DVQMLQDAISK Oxidation (M) 1262.6177 0.61765209 2612 Q16543 CDC37 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.52 3.51 3 4 14 2 3 2 1 1 2 2 1 1 2 1 2 1 55.761 54.252 2 3.2262E-09 67732 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.68 108.5 772770000 2057300 591240000 4882400 9077300 5296800 22634000 21629000 0 7847600 13831000 31487000 0 9078200 17064000 36646000 9647 2612 8786 82099;82100;82101;82102;82103;82104;82105;82106;82107;82108;82109;82110;82111;82112;82113;82114;82115;82116;82117;82118;82119 65821;65822;65823;65824;65825;65826;65827;65828;65829;65830;65831;65832;65833;65834;65835;65836;65837;65838 65825 4261 17 DVQMLQDAISK Unmodified 1246.6227 0.62273747 2612 Q16543 CDC37 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 4 3.46 3 1 1 1 1 1 70.483 66.186 2 7.0696E-10 83878 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 147.95 97.34 2824900000 21867000 2791500000 7345800 0 0 0 0 0 0 0 0 4194800 0 0 0 9648 2612 8786 82120;82121;82122;82123 65839;65840;65841;65842;65843 65840 5 DVQNFPAATDEK Unmodified 1333.615 0.61500956 417 O60610 DIAPH1 Protein diaphanous homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 39.945 40.208 2 1.2847E-06 44748 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 115.57 93.337 60130000 0 0 0 0 3545900 7354900 3278300 0 0 9832700 7425800 8951600 6498900 3923000 9318400 9649 417 8787 82124;82125;82126;82127;82128;82129;82130;82131;82132;82133 65844;65845;65846;65847;65848;65849;65850;65851;65852;65853;65854 65845 11 DVQPGSVADRDQR Unmodified 1441.691 0.69096847 3466 Q8NI35 INADL InaD-like protein yes yes 0 0 1 By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 19.784 19.921 3 0.018702 20408 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 32.759 25.591 27253000 0 0 0 0 4861100 4190100 4293500 3001200 0 0 0 0 6933300 0 3974200 9650 3466 8788 82134;82135;82136;82137;82138;82139 65855 65855 1 DVQPVAYEEPK Unmodified 1273.619 0.6190323 4053 Q99717 SMAD5 Mothers against decapentaplegic homolog 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 41.957 42.699 2 0.00093347 46551 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.228 65.398 33086000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33086000 9651 4053 8789 82140;82141;82142;82143;82144;82145;82146;82147 65856;65857;65858;65859;65860;65861;65862;65863 65857 8 DVQQESSEQK Unmodified 1176.5259 0.5258602 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 0 By MS/MS 1 0 1 1 106.12 111.38 2 0.0030859 92018 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 115.7 96.211 11343000 11343000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9652 3443 8790 82148 65864 65864 1 DVQSMDELK Unmodified 1063.4856 0.48557529 3038 Q7KZ85 SUPT6H Transcription elongation factor SPT6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 40.02 40.153 2 0.008436 43467 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.628 30.821 25000000 0 0 0 9828500 0 0 0 3528500 0 0 0 0 0 0 11643000 9653 3038 8791 82149;82150;82151 65865 65865 1 DVQSPGFLNEPLSSK Unmodified 1616.8046 0.80460124 3453 Q8NG31 CASC5 Protein CASC5 yes yes 0 0 0 By matching By MS/MS 2.33 0.471 2 1 1 2 75.474 73.086 2 1.0108E-15 91279 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.86 98.617 53108000 126830 52981000 0 0 0 0 0 0 0 0 0 0 0 0 0 9654 3453 8792 82152;82153;82154 65866;65867 65866 2 DVQTALALAK Unmodified 1028.5866 0.58660996 4051 Q99714 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 2 2 2 2 66.634 61.393 2 0.0041356 75269 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 91.069 50.965 765340000 335900 765000000 0 0 0 0 0 0 0 0 0 0 0 0 0 9655 4051 8793 82155;82156;82157;82158 65868;65869;65870;65871 65870 4 DVRDLFVDLVEK Unmodified 1446.7718 0.77184455 328 O43427 FIBP Acidic fibroblast growth factor intracellular-binding protein yes yes 0 0 1 By MS/MS 2 0 1 1 97.767 89.637 3 0.0012524 115736 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.622 55.935 10871000 10871000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9656 328 8794 82159 65872 65872 1 DVREAPVPSLHLK Unmodified 1459.8147 0.81471242 4297 Q9GZN8 C20orf27 UPF0687 protein C20orf27 yes yes 0 0 1 By MS/MS 2 0 1 1 64.181 60.425 3 0.012949 75177 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 59.185 51.274 14294000 0 0 14294000 0 0 0 0 0 0 0 0 0 0 0 0 9657 4297 8795 82160 65873 65873 0 DVRNPEAEEMK Unmodified 1316.6031 0.60306466 4392 Q9H467 CUEDC2 CUE domain-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 23.443 23.307 3 0.034052 28222 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 58.274 49.573 74075000 0 7337300 0 3059900 4038400 2783500 3681000 4277800 2130300 4148000 7062700 7535900 4992400 5790700 17238000 9658 4392 8796 82161;82162;82163;82164;82165;82166;82167;82168;82169;82170;82171;82172;82173 65874;65875 65875 1 DVRPAPAEEPLPDDNQAIQLQTLK Unmodified 2657.3661 0.36605909 3657 Q92766 RREB1 Ras-responsive element-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 78.555 78.032 3 4.1885E-45 90385 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 110.83 101.25 489300000 0 81688000 0 13570000 23742000 41866000 25573000 28529000 28133000 46049000 30725000 42032000 37984000 38842000 50565000 9659 3657 8797 82174;82175;82176;82177;82178;82179;82180;82181;82182;82183;82184;82185;82186;82187 65876;65877;65878;65879;65880;65881;65882;65883;65884;65885;65886;65887;65888;65889;65890 65883 15 DVRPYIVGAVVR Unmodified 1342.7721 0.77211932 3314 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 72.2 72.384 3 0.0073085 83352 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 35.737 27.14 88720000 0 0 0 0 0 9554800 6153400 6277900 4987000 8567500 8643600 8627700 8106200 6748900 21053000 9660 3314 8798 82188;82189;82190;82191;82192;82193;82194;82195;82196;82197 65891;65892;65893;65894;65895;65896;65897;65898;65899;65900;65901 65897 11 DVRQQYESVAAK Unmodified 1392.6997 0.69974224 870 P08670 VIM Vimentin yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 33.834 34.018 3 0.00067047 36970 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 54.199 38.045 97660000 0 0 0 3280300 6763500 5187400 12628000 0 6603300 11869000 14793000 13503000 8514300 5704700 8813000 9661 870 8799 82198;82199;82200;82201;82202;82203;82204;82205;82206;82207;82208 65902;65903;65904;65905;65906;65907 65906 6 DVRRGNVAGDSK Unmodified 1272.6535 0.65346075 1960 P68104;Q5VTE0 EEF1A1;EEF1A1P5 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3 yes no 0 0 2 By MS/MS 2 0 1 1 7.2125 3.6974 2 0.00056927 6929 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 131.83 87.477 75372000 75372000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9662 1960 8800 82209 65908 65908 0 DVRWPTETDVSSAK Unmodified 1589.7686 0.76855009 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.91 3.42 4 2 16 1 4 1 1 1 1 2 1 1 2 2 1 2 2 56.624 55.232 2;3 3.3278E-15 62038 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 122.42 86.686 520150000 11227000 261410000 7403800 0 13720000 0 16688000 28402000 13072000 14908000 34875000 41877000 14729000 23709000 38132000 9663 1226 8801 82210;82211;82212;82213;82214;82215;82216;82217;82218;82219;82220;82221;82222;82223;82224;82225;82226;82227;82228;82229;82230;82231 65909;65910;65911;65912;65913;65914;65915;65916;65917;65918;65919;65920;65921;65922;65923;65924;65925;65926;65927;65928;65929 65913 16 DVSALFPDVVNCMQTDNLELK Unmodified 2407.1399 0.13994724 2178 Q10567 AP1B1 AP-1 complex subunit beta-1 yes yes 0 0 0 By MS/MS 2 0 1 1 97.926 93.153 3 0.00048445 115321 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 50.237 36.075 63161000 0 63161000 0 0 0 0 0 0 0 0 0 0 0 0 0 9664 2178 8802 82232 65930 65930 1 DVSALFPDVVNCMQTDNLELK Oxidation (M) 2423.1349 0.13486186 2178 Q10567 AP1B1 AP-1 complex subunit beta-1 yes yes 0 1 0 By MS/MS 2 0 1 1 94.339 89.443 2 1.4046E-08 111022 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.178 49.073 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9665 2178 8802 82233 65931 65931 3549 1 DVSAPSSETFRK Unmodified 1322.6466 0.64664404 4642 Q9NUA8 ZBTB40 Zinc finger and BTB domain-containing protein 40 yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.103 31.292 3 0.0167 33595 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 32.263 28.941 91138000 0 0 0 5594800 6396800 6067600 5788500 4542800 5604500 9368200 8580300 12646000 6914700 8407900 11226000 9666 4642 8803 82234;82235;82236;82237;82238;82239;82240;82241;82242;82243;82244;82245 65932;65933 65933 2 DVSAQATGK Unmodified 875.43486 0.43486035 1578 P49588 AARS Alanine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS 1 0 1 1 106.29 111.56 2 0.0080137 92176 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 91.318 60.029 239590000 239590000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9667 1578 8804 82246 65934 65934 1 DVSDEDVARAINQK Unmodified 1558.7587 0.75871368 4359 Q9H269 VPS16 Vacuolar protein sorting-associated protein 16 homolog yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 52.489 47.154 2 8.0647E-58 60982 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 196.24 165.68 18643000 0 18643000 0 0 0 0 0 0 0 0 0 0 0 0 0 9668 4359 8805 82247;82248 65935;65936 65935 2 DVSDQIGNEEQVEDTFQK Unmodified 2079.9233 0.92327241 4641 Q9NU22 MDN1 Midasin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.182 68.259 2 1.0778E-62 78426 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 170.95 165.87 64709000 0 0 0 4654100 4171100 5100100 2893900 4058900 3695900 6949800 6085500 8776100 5456200 5547300 7320100 9669 4641 8806 82249;82250;82251;82252;82253;82254;82255;82256;82257;82258;82259;82260 65937;65938;65939;65940;65941;65942;65943;65944;65945;65946;65947;65948 65946 12 DVSEELSR Unmodified 933.44034 0.44033966 1409 P40222 TXLNA Alpha-taxilin yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 27.71 28.215 2 0.047929 29497 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.657 32.276 10836000 0 0 0 0 0 0 0 0 0 0 0 0 0 3369500 7466600 9670 1409 8807 82261;82262 65949 65949 1 DVSELTGFPEMLGGR Oxidation (M) 1622.761 0.76102187 1307 P31939 ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 2 1 1 81.66 81.827 2 1.5023E-14 94237 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 101.39 91.44 43202000 0 0 0 0 0 0 0 0 0 0 8725100 5804400 0 6016100 22656000 9671 1307 8808 82263;82264;82265;82266;82267 65950;65951;65952;65953 65950 1927 4 DVSELTGFPEMLGGR Unmodified 1606.7661 0.76610724 1307 P31939 ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes yes 0 0 0 By MS/MS 10 0 1 1 89.164 89.308 2 0.0054613 103339 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.261 46.532 12826000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12826000 9672 1307 8808 82268 65954 65954 1 DVSGLHSK Unmodified 841.42938 0.42938104 1695 P52732 KIF11 Kinesin-like protein KIF11 yes yes 0 0 0 By MS/MS By MS/MS 2.67 0.471 1 2 1 2 8.6401 5.1779 2 0.034949 7703 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.789 52.943 127660000 228370 127430000 0 0 0 0 0 0 0 0 0 0 0 0 0 9673 1695 8809 82269;82270;82271 65955 65955 1 DVSGPMPDSYSPR Oxidation (M) 1422.6085 0.60854397 1210 P26640 VARS Valine--tRNA ligase yes yes 0 1 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 1 2 2 2 2 1 2 2 2 2 2 37.37 37.614 2 6.7561E-07 41402 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 93.258 73.987 167530000 0 0 0 5104800 3631500 20944000 11672000 9724400 10305000 9593500 15962000 24282000 18013000 13326000 24977000 9674 1210 8810 82272;82273;82274;82275;82276;82277;82278;82279;82280;82281;82282;82283;82284;82285;82286;82287;82288;82289;82290;82291;82292 65956;65957;65958;65959;65960;65961;65962;65963;65964;65965 65964 1773 10 DVSGPMPDSYSPR Unmodified 1406.6136 0.61362935 1210 P26640 VARS Valine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 49.473 49.614 2 0.0038854 55916 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 53.569 43.615 295260000 0 0 0 19290000 8209100 29329000 56860000 12029000 0 22404000 24770000 30934000 0 37103000 54333000 9675 1210 8810 82293;82294;82295;82296;82297;82298;82299;82300;82301;82302 65966;65967;65968;65969;65970;65971;65972;65973 65966 8 DVSHEIIQHEVK Unmodified 1432.731 0.73104237 3111 Q7Z6E9 RBBP6 E3 ubiquitin-protein ligase RBBP6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 42.281 42.181 3 0.00019467 46163 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 77.185 67.397 144210000 0 0 11475000 0 8709200 8922000 10476000 8906600 9144800 17249000 15747000 11533000 15107000 11474000 15471000 9676 3111 8811 82303;82304;82305;82306;82307;82308;82309;82310;82311;82312;82313;82314 65974;65975;65976;65977;65978;65979;65980;65981 65980 7 DVSLGDWEFGK Unmodified 1251.5772 0.57716749 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 83.27 83.222 2 0.0052215 96248 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 70.1 49.771 28132000 0 0 0 2825500 5172300 8660700 3456200 8017800 0 0 0 0 0 0 0 9677 4285 8812 82315;82316;82317;82318;82319 65982;65983;65984 65983 3 DVSLLTQK Unmodified 902.5073 0.50729701 3796 Q96DG6 CMBL Carboxymethylenebutenolidase homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.94 3.84 6 1 11 1 4 2 1 1 1 1 1 1 1 1 1 1 1 47.225 45.236 1;2 3.653E-29 57143 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 226.54 121.15 3615000000 89910000 3106000000 35694000 13147000 10817000 17597000 18713000 0 12194000 28831000 52977000 53727000 23563000 40091000 111670000 9678 3796 8813 82320;82321;82322;82323;82324;82325;82326;82327;82328;82329;82330;82331;82332;82333;82334;82335;82336;82337 65985;65986;65987;65988;65989;65990;65991;65992;65993;65994;65995;65996;65997;65998;65999;66000 65990 11 DVSQSSIYSQTEEK Unmodified 1599.7264 0.7264105 781 P04279 SEMG1 Semenogelin-1;Alpha-inhibin-92;Alpha-inhibin-31;Seminal basic protein yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 39.453 39.287 2 0.0002668 43165 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 79.693 64.721 22059000 0 0 0 8892900 0 0 0 13166000 0 0 0 0 0 0 0 9679 781 8814 82338;82339 66001 66001 1 DVSRLETVFVPPEK Unmodified 1614.8617 0.86172219 4264 Q9BZF9 UACA Uveal autoantigen with coiled-coil domains and ankyrin repeats yes yes 0 0 1 By matching By MS/MS 2 0 2 1 1 80.196 76.557 3 0.0098826 93257 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 46.318 36.518 19073000 0 13561000 5511700 0 0 0 0 0 0 0 0 0 0 0 0 9680 4264 8815 82340;82341 66002 66002 1 DVSSLFPDVVNCMQTDNLELK Unmodified 2423.1349 0.13486186 1937 P63010 AP2B1 AP-2 complex subunit beta yes yes 0 0 0 By MS/MS 2 0 2 2 97.803 93.029 2;3 1.9449E-58 115300 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 153.09 117.33 87637000 0 87637000 0 0 0 0 0 0 0 0 0 0 0 0 0 9681 1937 8816 82342;82343 66003;66004;66005 66005 3 DVSVAELLR Unmodified 1000.5553 0.55530983 810 P05423 POLR3D DNA-directed RNA polymerase III subunit RPC4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.987 81.047 2 0.0050719 93988 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 84.498 59.979 84621000 0 0 0 5530100 4730800 8458200 6373800 6369000 7146500 8079700 6538200 9688400 5104700 5692400 10909000 9682 810 8817 82344;82345;82346;82347;82348;82349;82350;82351;82352;82353;82354;82355 66006;66007;66008;66009;66010;66011;66012;66013;66014;66015;66016 66013 11 DVSVPVAEIK Unmodified 1055.5863 0.58627561 2988 Q6VY07 PACS1 Phosphofurin acidic cluster sorting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.926 64.018 2 0.0041248 73283 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 73.985 59.989 151450000 0 0 0 8547500 9394400 13993000 10999000 6715900 7504900 14784000 15695000 17227000 13811000 11800000 20980000 9683 2988 8818 82356;82357;82358;82359;82360;82361;82362;82363;82364;82365;82366;82367 66017;66018;66019;66020;66021;66022;66023;66024;66025 66017 7 DVSVTVGMDSR Oxidation (M) 1180.5394 0.53940177 99 Q6KB66;CON__Q6KB66-1 KRT80 Keratin, type II cytoskeletal 80 yes no 0 1 0 By MS/MS 10 0 1 1 34.124 33.716 2 0.032321 37643 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 54.066 35.626 + 11931000 0 0 0 11931000 0 0 0 0 0 0 0 0 0 0 0 9684 99 8819 82368 66026 66026 0 DVTADFEGQSPK Unmodified 1292.5885 0.58846046 4903 Q9UHL4 DPP7 Dipeptidyl peptidase 2 yes yes 0 0 0 By MS/MS 10 0 1 1 46.596 46.023 2 0.0044902 52393 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 74.841 48.327 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9685 4903 8820 82369 66027 66027 1 DVTEAEQAEEQARQEEQVVR Unmodified 2343.0939 0.093859983 2188 Q12788 TBL3 Transducin beta-like protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 2 1 1 1 1 1 61.95 62.164 3 2.6123E-11 70920 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 67.449 63.497 40170000 0 0 0 0 4749900 0 0 4727900 0 0 5806000 13028000 0 5367800 6490800 9686 2188 8821 82370;82371;82372;82373;82374;82375;82376;82377;82378 66028;66029;66030;66031;66032;66033;66034;66035;66036 66032 9 DVTFNLK Unmodified 835.44397 0.44396847 3995 Q96SU4 OSBPL9 Oxysterol-binding protein-related protein 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 56.052 55.721 2 0.02525 69736 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.67 52.497 252980000 0 73159000 0 8401200 7773900 11460000 10765000 12886000 8598200 18099000 21312000 24640000 14381000 15820000 25684000 9687 3995 8822 82379;82380;82381;82382;82383;82384;82385;82386;82387;82388;82389;82390;82391 66037;66038;66039;66040 66039 4 DVTGAEALLER Unmodified 1172.6037 0.60371659 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 69.763 69.832 2 0.0024322 80880 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 67.726 59.8 214420000 0 0 0 8281300 9464800 18998000 0 8827700 7653900 35959000 25476000 24818000 13670000 17198000 44074000 9688 2344 8823 82392;82393;82394;82395;82396;82397;82398;82399;82400;82401;82402 66041;66042;66043;66044;66045;66046;66047;66048 66047 7 DVTIGGSAPIYVK Unmodified 1318.7133 0.71326704 3521 Q8TEW0 PARD3 Partitioning defective 3 homolog yes yes 0 0 0 By MS/MS 10 0 1 1 70.882 70.992 2 0.041182 81767 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 45.908 22.057 10312000 0 0 0 0 0 0 0 0 0 10312000 0 0 0 0 0 9689 3521 8824 82403 66049 66049 1 DVTILAATNRPDRIDK Unmodified 1796.9745 0.97446054 3388 Q8NB90 SPATA5 Spermatogenesis-associated protein 5 yes yes 0 0 2 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 55.769 55.955 3 0.0043488 63757 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 55.186 42.809 51391000 0 0 0 1171200 0 5016100 3109500 3145600 0 3610000 4708300 9522200 5210800 5201600 10696000 9690 3388 8825 82404;82405;82406;82407;82408;82409;82410;82411;82412;82413 66050;66051;66052;66053 66052 4 DVTIVPSTGEPTTLSSETHIPEEK Unmodified 2566.265 0.26500764 3989 Q96SD1 DCLRE1C Protein artemis yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 78.593 74.516 3 8.1022E-05 89557 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 57.826 40.678 39948000 0 39948000 0 0 0 0 0 0 0 0 0 0 0 0 0 9691 3989 8826 82414;82415 66054;66055 66055 1 DVTLENR Unmodified 845.4243 0.42429566 1580 P49591 SARS Serine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 7 1 1 1 1 1 1 1 20.757 21.041 2 0.048847 21434 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.803 14.684 148500000 0 0 0 0 8912800 0 8273500 0 6928700 0 25225000 35144000 0 21865000 42146000 9692 1580 8827 82416;82417;82418;82419;82420;82421;82422 66056 66056 1 DVTNFTVGGFAPMSPR Unmodified 1694.8086 0.80864076 136 O00267 SUPT5H Transcription elongation factor SPT5 yes yes 0 0 0 By MS/MS 10 0 1 1 85.033 85.212 2 0.017843 98435 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.644 26.768 3224100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3224100 9693 136 8828 82423 66057 66057 1 DVTNFTVGGFAPMSPR Oxidation (M) 1710.8036 0.80355538 136 O00267 SUPT5H Transcription elongation factor SPT5 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 78.857 78.92 2 0.00081046 92313 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 52.576 29.34 73437000 0 0 0 5697700 0 0 0 0 0 0 12947000 10264000 7205000 11103000 26220000 9694 136 8828 82424;82425;82426;82427;82428;82429 66058 66058 183 1 DVTNNVHYENYR Unmodified 1522.6801 0.68006943 2596 Q16181 SEPT7 Septin-7 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 18 1 2 1 1 1 1 2 2 1 2 2 2 36.449 36.654 2;3 3.5588E-09 39441 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 141.88 135.64 281160000 0 0 0 12537000 12176000 13048000 12156000 14064000 10451000 25682000 51843000 38938000 28780000 19882000 41600000 9695 2596 8829 82430;82431;82432;82433;82434;82435;82436;82437;82438;82439;82440;82441;82442;82443;82444;82445;82446;82447 66059;66060;66061;66062;66063;66064;66065 66060 6 DVTPPPETEVVLIK Unmodified 1535.8447 0.84467514 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.9 2.69 2 1 18 2 1 2 1 2 1 1 1 2 2 2 1 1 2 79.714 79.26 2;3 0.0015527 92022 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 71.555 57.786 881990000 0 247230000 1826000 37691000 36534000 42647000 41796000 32550000 30634000 64832000 71546000 83675000 41507000 50174000 99344000 9696 1226 8830 82448;82449;82450;82451;82452;82453;82454;82455;82456;82457;82458;82459;82460;82461;82462;82463;82464;82465;82466;82467;82468 66066;66067;66068;66069;66070;66071;66072;66073;66074;66075;66076 66075 8 DVTPPQTSGYIEVTDLQSK Unmodified 2077.0215 0.021529888 16 A3KMH1 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 0 0 0 By MS/MS 10 0 1 1 77.412 77.1 2 0.0052802 89139 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 35.204 22.003 2876100 0 0 0 0 2876100 0 0 0 0 0 0 0 0 0 0 9697 16 8831 82469 66077 66077 1 DVTQLDPNK Unmodified 1028.5138 0.51383895 5037 Q9UNN5 FAF1 FAS-associated factor 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching 10 0 5 1 1 1 1 1 31.511 31.518 2 0.014237 34817 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 58.596 35.525 19291000 0 0 0 3553600 2092600 0 0 0 0 4401200 0 0 5324800 3918600 0 9698 5037 8832 82470;82471;82472;82473;82474 66078;66079 66079 2 DVTTFFSGK Unmodified 1000.4866 0.48656157 3362 Q8N6T3 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.149 69.226 2 0.006731 80459 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 74.301 38.807 190540000 0 0 0 9543500 12237000 13749000 12789000 16604000 10588000 15853000 21475000 21562000 18280000 13412000 24447000 9699 3362 8833 82475;82476;82477;82478;82479;82480;82481;82482;82483;82484;82485;82486 66080;66081;66082;66083;66084;66085;66086;66087;66088 66087 8 DVTTSEDFFDK Unmodified 1302.5616 0.561577 3742 Q96AX1 VPS33A Vacuolar protein sorting-associated protein 33A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 64.147 63.73 2 0.0052215 72954 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 70.1 62.175 135230000 0 85838000 0 3392100 3397100 3799300 5110800 0 3109000 4456300 6121600 4585700 3867600 4042200 7507400 9700 3742 8834 82487;82488;82489;82490;82491;82492;82493;82494;82495;82496;82497;82498 66089;66090;66091;66092;66093;66094;66095;66096;66097;66098 66091 10 DVTVLQNTDGNNNEAWAK Unmodified 1987.9235 0.92354718 764 P02788 LTF Lactotransferrin;Lactoferricin-H;Kaliocin-1;Lactoferroxin-A;Lactoferroxin-B;Lactoferroxin-C yes yes 0 0 0 By MS/MS 10 0 1 1 64.352 64.505 2 6.7823E-40 74144 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 178.32 170.19 8132600 0 0 0 0 0 0 0 0 0 0 0 0 8132600 0 0 9701 764 8835 82499 66099 66099 1 DVTVLSVAEEQDLLK Unmodified 1657.8774 0.87743183 2456 Q14966 ZNF638 Zinc finger protein 638 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 6 4 2 2 1 1 1 1 91.074 87.389 2 0.00068414 108368 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.623 60.214 473640000 0 468830000 4813000 0 0 0 0 0 0 0 0 0 0 0 0 9702 2456 8836 82500;82501;82502;82503 66100;66101;66102 66101 3 DVTVYNPELDK Unmodified 1291.6296 0.62959699 4678 Q9NVR0 KLHL11 Kelch-like protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 55.593 55.85 2 0.014397 63407 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 45.598 26.283 17750000 0 0 0 0 0 2832000 3025400 0 0 3317700 2576200 3463000 2535600 0 0 9703 4678 8837 82504;82505;82506;82507;82508;82509 66103;66104;66105;66106;66107 66104 5 DVTYEEAK Unmodified 953.43419 0.43419164 1834 P61106 RAB14 Ras-related protein Rab-14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 17.805 17.96 2 0.0091721 18097 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 83.753 54.854 77473000 0 0 0 6140800 7559400 5009700 7621700 5455800 4822900 7712100 9079300 8638500 8650300 6782800 0 9704 1834 8838 82510;82511;82512;82513;82514;82515;82516;82517;82518;82519;82520 66108;66109;66110;66111;66112;66113;66114;66115;66116;66117;66118 66113 11 DVVDNDEGNWLHAIK Unmodified 1723.8166 0.81656291 2953 Q6PID6 TTC33 Tetratricopeptide repeat protein 33 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 80.408 75.27 3 4.8794E-23 96279 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.18 96.59 102260000 23783000 76107000 2371600 0 0 0 0 0 0 0 0 0 0 0 0 9705 2953 8839 82521;82522;82523 66119;66120;66121 66120 2 DVVENGETADQTLSLMEQLRGEALK Unmodified 2745.3491 0.34908839 1528 P47897 QARS Glutamine--tRNA ligase yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 95.181 89.869 3 4.4286E-38 113791 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 112.48 105.6 44190000 38226000 0 5964600 0 0 0 0 0 0 0 0 0 0 0 0 9706 1528 8840 82524;82525 66122;66123 66122 2 DVVHTSEEAR Unmodified 1141.5364 0.53636531 344 O43592 XPOT Exportin-T yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 1 1 2 13.375 13.55 2;3 0.026475 12151 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.717 28.062 65778000 0 0 0 3014200 2879700 7074700 3317200 2851200 2365600 5135000 6078200 4474300 3263200 5570200 19755000 9707 344 8841 82526;82527;82528;82529;82530;82531;82532;82533;82534;82535;82536;82537;82538 66124;66125;66126 66125 2 DVVICPDASLEDAK Unmodified 1530.7236 0.72357373 4015 Q99497 PARK7 Protein deglycase DJ-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 68.436 67.608 2 0.0010284 83570 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.103 70.06 393320000 0 19348000 0 13266000 0 0 0 0 0 0 67102000 42404000 0 55592000 195610000 9708 4015 8842 82539;82540;82541;82542;82543;82544 66127;66128;66129 66127 2 DVVICPDASLEDAKK Unmodified 1658.8185 0.81853675 4015 Q99497 PARK7 Protein deglycase DJ-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 58.652 58.753 3 0.010644 66358 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.557 39.241 167820000 0 0 0 10683000 2410800 0 3852300 2415800 0 0 32692000 22292000 0 23616000 69855000 9709 4015 8843 82545;82546;82547;82548;82549;82550;82551;82552 66130;66131;66132 66130 1 DVVMEPTMK 2 Oxidation (M) 1080.4831 0.48313245 4319 Q9H0A0 NAT10 N-acetyltransferase 10 yes yes 0 2 0 By matching By MS/MS By matching 10 0 3 1 1 1 21.738 21.843 2 0.015553 22795 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 42.599 21.627 45272000 0 0 0 8375500 0 0 0 0 9206900 0 0 0 0 27689000 0 9710 4319 8844 82553;82554;82555 66133 66133 5780;5781 1 DVVMEPTMK Unmodified 1048.4933 0.4933032 4319 Q9H0A0 NAT10 N-acetyltransferase 10 yes yes 0 0 0 By MS/MS 10 0 1 1 47.172 47.326 2 0.026405 53097 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 49.833 31.509 3940300 0 0 0 0 0 0 0 0 3940300 0 0 0 0 0 0 9711 4319 8844 82556 66134 66134 1 DVVMVHEPK Unmodified 1052.5325 0.5324659 116 O00139 KIF2A Kinesin-like protein KIF2A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 33.705 33.967 2 0.025904 37205 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 50.04 37.684 26392000 0 0 0 0 0 2139000 3309900 0 2575200 4067700 5639800 0 0 3061500 5598700 9712 116 8845 82557;82558;82559;82560;82561;82562;82563 66135;66136;66137 66135 3 DVVNVLQAVGESLAK Unmodified 1540.8461 0.84607213 3242 Q8IWJ2 GCC2 GRIP and coiled-coil domain-containing protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 99.821 95.108 2 0.00729 117610 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.602 51.782 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9713 3242 8846 82564 66138 66138 1 DVVQAYPEVR Unmodified 1174.5982 0.59823728 2152 Q08211 DHX9 ATP-dependent RNA helicase A yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 49.304 49.435 2 0.0027291 56185 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 80.688 58.451 35704000 0 0 0 0 0 11533000 0 11907000 0 12264000 0 0 0 0 0 9714 2152 8847 82565;82566;82567;82568 66139;66140;66141 66139 3 DVVTAAGDMLK Unmodified 1118.5642 0.56415996 844 P07602 PSAP Prosaposin;Saposin-A;Saposin-B-Val;Saposin-B;Saposin-C;Saposin-D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 72.35 71.793 2 0.00074428 82745 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 77.533 60.42 549720000 0 446780000 0 5033800 5302500 5754900 5019800 5587600 4337700 6830200 11159000 12793000 5681800 8126500 27312000 9715 844 8848 82569;82570;82571;82572;82573;82574;82575;82576;82577;82578;82579;82580;82581;82582 66142;66143;66144;66145;66146;66147;66148;66149;66150;66151;66152;66153 66151 9 DVVTAAGDMLK Oxidation (M) 1134.5591 0.55907458 844 P07602 PSAP Prosaposin;Saposin-A;Saposin-B-Val;Saposin-B;Saposin-C;Saposin-D yes yes 0 1 0 By MS/MS 2 0 1 1 50.327 44.62 2 0.0042238 57991 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.098 58.311 39656000 0 39656000 0 0 0 0 0 0 0 0 0 0 0 0 0 9716 844 8848 82583 66154 66154 1047 1 DVYEEFDEK Unmodified 1172.4873 0.48734943 895 P09884 POLA1 DNA polymerase alpha catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 50.461 50.241 2 0.0091747 56744 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 67.494 59.075 31554000 0 0 0 8621900 7289800 0 5775000 0 0 0 0 0 0 9867200 0 9717 895 8849 82584;82585;82586;82587;82588;82589 66155;66156;66157;66158;66159;66160 66155 6 DVYIVQDLMETDLYK Unmodified 1843.8914 0.89136734 1236;1215 P27361;P28482 MAPK3;MAPK1 Mitogen-activated protein kinase 3;Mitogen-activated protein kinase 1 no no 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 97.863 91.411 2 9.5751E-38 115776 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 161.94 147.26 77518000 47593000 29925000 0 0 0 0 0 0 0 0 0 0 0 0 0 9718 1215;1236 8850 82590;82591;82592 66161;66162;66163 66163 3 DVYLSPR Unmodified 848.43922 0.43921744 1395 P38159;Q96E39 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 36.823 36.941 2 0.026498 41102 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 78.616 21.152 107470000 0 0 0 9218700 11248000 11663000 11954000 9227900 0 15362000 0 16249000 0 0 22545000 9719 1395 8851 82593;82594;82595;82596;82597;82598;82599;82600 66164 66164 1 DVYSVSVDQK Unmodified 1138.5506 0.55061839 4193 Q9BVM2 DPCD Protein DPCD yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 41.041 41.283 2 0.040855 44801 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 48.423 37.064 105660000 0 0 0 0 5363900 8684800 7332100 6225100 6421700 11006000 11357000 14501000 9242200 10032000 15498000 9720 4193 8852 82601;82602;82603;82604;82605;82606;82607;82608;82609;82610;82611 66165;66166 66166 2 DWCYEATYSQLAHPIQQAK Unmodified 2308.0583 0.058266521 346 O43615 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 0 0 0 By MS/MS 10 0 1 1 78.682 78.928 3 0.018558 90804 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.923 32.225 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9721 346 8853 82612 66167 66167 1 DWDELEEEARK Unmodified 1418.6314 0.6313879 5231 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 5.12 3.79 4 1 3 2 2 1 1 1 1 61.157 57.383 2;3 0.00068464 70458 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 70.942 62.212 114960000 57797000 32995000 3054700 0 0 10621000 0 0 0 0 0 0 0 2797300 7691300 9722 5231 8854 82613;82614;82615;82616;82617;82618;82619;82620 66168;66169;66170;66171;66172;66173 66169 5 DWDNEYCSNECVVK Unmodified 1816.7032 0.70324899 592 O94842 TOX4 TOX high mobility group box family member 4 yes yes 0 0 0 By MS/MS 2 0 1 1 60.936 55.078 2 1.434E-24 70697 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 133.07 132.55 16514000 0 16514000 0 0 0 0 0 0 0 0 0 0 0 0 0 9723 592 8855 82621 66174 66174 1 DWEANACK Unmodified 992.40218 0.40218001 2125 Q06210 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 1 1 6 2 1 1 1 1 1 1 23.329 22.556 2 0.013714 23417 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.715 62.199 123430000 0 100580000 0 0 0 0 1727100 0 0 2379700 4170500 0 3611600 3831400 7130400 9724 2125 8856 82622;82623;82624;82625;82626;82627;82628;82629 66175;66176;66177 66176 3 DWENASTTSSVASGTEYTGPK Unmodified 2186.9604 0.96038619 2164 Q08AD1 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 63.527 57.62 2 1.0323E-71 73892 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 171.67 164.47 14535000 0 14535000 0 0 0 0 0 0 0 0 0 0 0 0 0 9725 2164 8857 82630 66178;66179 66179 2 DWFLENK Unmodified 950.44978 0.44978213 2923 Q6P1Q9 METTL2B Methyltransferase-like protein 2B no no 0 0 0 By MS/MS 2 0 1 1 75.234 70.294 2 0.037978 88088 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.386 31.349 22787000 0 22787000 0 0 0 0 0 0 0 0 0 0 0 0 0 9726 2923 8858 82631 66180 66180 1 DWILPSDYDHAEAEAR Unmodified 1886.8435 0.84350594 376 O43852 CALU Calumenin yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 76.562 75.791 3 6.7306E-21 87327 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.754 80.269 111210000 10183000 0 0 0 0 2862100 0 4597800 0 3574200 11883000 15045000 2640700 8580700 51842000 9727 376 8859 82632;82633;82634;82635;82636;82637;82638;82639;82640 66181;66182;66183;66184;66185;66186 66181 6 DWILPSDYDHAEAEARHLVYESDQNK Unmodified 3100.4163 0.41625675 376 O43852 CALU Calumenin yes yes 0 0 1 By MS/MS 2 0 3 3 89.931 81.801 3;4;5 3.3547E-38 106233 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 111.58 102.25 243590000 243590000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9728 376 8860 82641;82642;82643 66187;66188;66189 66187 1 DWNDMER Unmodified 964.37088 0.37087988 1837;1444 P61163;P42025 ACTR1A;ACTR1B Alpha-centractin;Beta-centractin no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 35.503 35.754 2 0.040827 39050 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 68.422 61.071 65143000 0 0 0 0 3119900 5591100 3273700 4242500 0 5322200 8827800 8293500 4789500 6296900 15386000 9729 1837;1444 8861 82644;82645;82646;82647;82648;82649;82650;82651;82652;82653 66190 66190 1 DWNEELQTTR Unmodified 1290.584 0.58404378 465 O75153 CLUH Clustered mitochondria protein homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 51.715 52.157 2 0.0045797 58061 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 72.325 55.094 21547000 0 0 0 0 0 0 0 0 0 0 6923400 0 0 5564200 9059000 9730 465 8862 82654;82655;82656;82657;82658 66191;66192;66193;66194;66195 66195 5 DWNIPFK Unmodified 918.45995 0.45995289 4250 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.877 79.936 2 0.027575 92538 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 77.374 52.742 40634000 0 0 0 2288900 1400900 3357800 1918100 2279300 2169900 4668400 3369800 4966900 3006500 3351500 7855600 9731 4250 8863 82659;82660;82661;82662;82663;82664;82665;82666;82667;82668;82669;82670 66196;66197;66198 66197 3 DWNTLIVGK Unmodified 1044.5604 0.56039521 208 O14744 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 76.704 76.791 2 0.0052558 88134 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.77 63.619 51093000 0 0 0 2215000 0 3722000 2674700 0 2490500 4389800 6037000 5827000 4093400 4902800 14741000 9732 208 8864 82671;82672;82673;82674;82675;82676;82677;82678;82679;82680 66199;66200 66199 2 DWQEGGYTINDKPNPR Unmodified 1888.8704 0.8703894 403 O60488 ACSL4 Long-chain-fatty-acid--CoA ligase 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 52.509 52.57 3 0.00035323 59654 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 62.357 58.255 119620000 0 0 0 5284000 10180000 9153300 6879900 15402000 6174600 19682000 0 0 13635000 10456000 22769000 9733 403 8865 82681;82682;82683;82684;82685;82686;82687;82688;82689;82690 66201;66202;66203;66204;66205;66206;66207;66208;66209;66210;66211;66212 66212 11 DWQGFLELYLQNSPEACDYGL Unmodified 2517.1158 0.11584098 1984 P78417 GSTO1 Glutathione S-transferase omega-1 yes yes 0 0 0 By MS/MS 2 0 2 2 102.63 94.495 2;3 0.0028989 121516 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 36.253 35.441 23444000 23444000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9734 1984 8866 82691;82692 66213;66214 66214 2 DWQPHISPAGTEPAYIEYK Unmodified 2201.0429 0.042934032 4808 Q9P265 DIP2B Disco-interacting protein 2 homolog B yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 80.639 77.102 3 0.038041 92290 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 22.435 13.726 40840000 0 35103000 5737300 0 0 0 0 0 0 0 0 0 0 0 0 9735 4808 8867 82693;82694;82695 66215;66216 66216 1 DWSFYLLYYTEFTPTEK Unmodified 2202.0197 0.019738974 1858 P61769 B2M Beta-2-microglobulin;Beta-2-microglobulin form pI 5.3 yes yes 0 0 0 By MS/MS 2 0 1 1 100.18 92.046 3 0.0018757 118621 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.03 45.773 8927600 8927600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9736 1858 8868 82696 66217 66217 1 DWSHYFK Unmodified 981.43447 0.43446642 814 P05783 KRT18 Keratin, type I cytoskeletal 18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.495 60.6 2 0.028162 68087 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.833 57.13 872180000 0 0 0 31194000 25977000 89613000 48619000 74251000 65619000 67790000 66175000 102960000 81098000 63215000 155670000 9737 814 8869 82697;82698;82699;82700;82701;82702;82703;82704;82705;82706;82707;82708 66218;66219;66220;66221;66222 66220 3 DWSNDVRAELAK Unmodified 1402.6841 0.68409218 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 6 12 2 2 2 1 1 1 1 1 1 1 1 1 1 1 1 70.549 68.784 2;3 2.3651E-12 88743 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 127.87 90.676 965620000 115490000 629850000 67737000 6556200 5201600 13252000 8076500 7268300 9245500 10734000 12788000 17138000 9364400 17263000 35652000 9738 1986 8870 82709;82710;82711;82712;82713;82714;82715;82716;82717;82718;82719;82720;82721;82722;82723;82724;82725;82726 66223;66224;66225;66226;66227;66228;66229 66227 6 DWTSDVNVK Unmodified 1062.4982 0.49818889 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 52.466 52.514 2 0.012989 60183 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 60.478 45.696 168320000 0 0 0 11057000 16131000 14506000 18770000 18124000 0 26802000 31311000 0 0 0 31617000 9739 4285 8871 82727;82728;82729;82730;82731;82732;82733;82734 66230;66231;66232;66233;66234 66233 4 DWVLNEFK Unmodified 1049.5182 0.51819605 1062 P17844 DDX5 Probable ATP-dependent RNA helicase DDX5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 81.308 81.426 2 0.032623 94247 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 54.205 33.506 16477000 0 0 0 0 0 3696400 0 2855500 2421700 4001500 0 0 0 3501700 0 9740 1062 8872 82735;82736;82737;82738;82739 66235;66236 66235 2 DWVTPYK Unmodified 907.44397 0.44396847 4945 Q9UJX4 ANAPC5 Anaphase-promoting complex subunit 5 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 57.276 51.934 2 0.035362 66714 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.359 69.339 26623000 0 26623000 0 0 0 0 0 0 0 0 0 0 0 0 0 9741 4945 8873 82740;82741 66237 66237 1 DYADFVNLSTNLVGMDK Unmodified 1900.8877 0.88767894 2443 Q14746 COG2 Conserved oligomeric Golgi complex subunit 2 yes yes 0 0 0 By MS/MS 2 0 1 1 96.197 91.375 2 6.7448E-09 113227 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.95 116.69 17832000 0 17832000 0 0 0 0 0 0 0 0 0 0 0 0 0 9742 2443 8874 82742 66238 66238 1 DYADFVNLSTNLVGMDK Oxidation (M) 1916.8826 0.88259357 2443 Q14746 COG2 Conserved oligomeric Golgi complex subunit 2 yes yes 0 1 0 By MS/MS 2 0 1 1 92.188 87.277 2 9.2829E-09 108436 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.944 74.313 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9743 2443 8874 82743 66239 66239 4011 1 DYADSIHAIFVETSAK Unmodified 1765.8523 0.85227972 4985 Q9UL26 RAB22A Ras-related protein Rab-22A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 83.781 83.929 3 0.0056963 96931 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 26.837 19.429 44946000 0 0 0 0 0 4573800 0 6116600 4770100 5915500 6492400 6719500 0 0 10358000 9744 4985 8875 82744;82745;82746;82747;82748;82749;82750 66240;66241;66242;66243 66241 4 DYAFIHFDERDGAVK Unmodified 1781.8373 0.83729835 407 O60506 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q yes yes 0 0 1 By MS/MS 2 0 2 2 80.193 72.062 3;4 0.0031216 94580 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.075 80.031 146290000 146290000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9745 407 8876 82751;82752 66244;66245 66245 1 DYAFVHFEDR Unmodified 1297.5728 0.57275081 322 O43390 HNRNPR Heterogeneous nuclear ribonucleoprotein R yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 70.071 70.129 3 0.0043185 79758 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.401 48.741 58277000 0 0 0 3057200 1966100 6965500 3655200 3450400 4705700 2820500 0 8796500 6286600 4425900 12147000 9746 322 8877 82753;82754;82755;82756;82757;82758;82759;82760;82761;82762;82763 66246;66247;66248;66249 66247 4 DYAFVHFEDRGAAVK Unmodified 1723.8318 0.83181904 322 O43390 HNRNPR Heterogeneous nuclear ribonucleoprotein R yes yes 0 0 1 By MS/MS 2 0 1 1 75.95 67.819 3 0.0033693 89438 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.482 49.633 18352000 18352000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9747 322 8878 82764 66250 66250 1 DYAFVHMEK Oxidation (M) 1154.5066 0.50664508 3948 Q96PK6 RBM14 RNA-binding protein 14 yes yes 0 1 0 By MS/MS 2 0 1 1 39.907 36.358 3 0.037494 45786 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 40.724 25.463 4016000 0 0 4016000 0 0 0 0 0 0 0 0 0 0 0 0 9748 3948 8879 82765 66251 66251 1 DYAPPPRDYTYR Unmodified 1512.6997 0.69974224 1395 P38159;Q96E39 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 41.571 41.696 3 0.0040112 46302 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 41.242 27.278 96087000 0 0 0 5529400 5405300 9240400 6438300 6111200 6053300 10565000 13399000 0 8646800 8401300 16298000 9749 1395 8880 82766;82767;82768;82769;82770;82771;82772;82773;82774;82775;82776 66252;66253;66254;66255;66256;66257;66258;66259;66260;66261 66253 9 DYAVSTVPVADGLHLK Unmodified 1683.8832 0.88318591 579 O94760 DDAH1 N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.42 3.88 6 1 5 1 4 2 1 1 1 2 79.795 77.321 2;3 0.00014351 96410 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.574 70.693 750950000 27575000 616970000 30034000 0 0 0 0 0 0 0 11320000 11403000 0 8632300 45019000 9750 579 8881 82777;82778;82779;82780;82781;82782;82783;82784;82785;82786;82787;82788 66262;66263;66264;66265;66266;66267;66268;66269;66270;66271;66272 66262 8 DYDAMGSQTK Oxidation (M) 1130.455 0.45500344 5077 Q9Y230 RUVBL2 RuvB-like 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 7.8346 7.9503 2 0.0019404 6373 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 78.516 69.276 18569000 0 0 0 848840 948630 1316300 1387300 0 0 2539300 3753600 0 2457700 2768000 2549500 9751 5077 8882 82789;82790;82791;82792;82793;82794;82795;82796;82797 66273;66274;66275;66276;66277;66278;66279;66280 66278 6463 7 DYDAMGSQTK Unmodified 1114.4601 0.46008882 5077 Q9Y230 RUVBL2 RuvB-like 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.182 20.383 2 0.0063431 20689 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 65.305 51.148 84844000 0 0 0 3803700 2822900 10061000 2955400 3739700 3181900 6743200 12789000 13288000 7979800 6282900 11197000 9752 5077 8882 82798;82799;82800;82801;82802;82803;82804;82805;82806;82807;82808;82809 66281;66282;66283;66284;66285;66286;66287;66288;66289 66289 9 DYDDMSPR Oxidation (M) 1013.376 0.37602484 1868 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 13 13.155 2 0.0044935 12014 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 95.352 90.497 587340000 0 0 0 24773000 24244000 57469000 51202000 25683000 30424000 73901000 55536000 71658000 55364000 47519000 69564000 9753 1868 8883 82810;82811;82812;82813;82814;82815;82816;82817;82818;82819;82820;82821;82822;82823;82824;82825;82826;82827;82828;82829;82830;82831;82832;82833 66290;66291;66292;66293;66294;66295;66296;66297;66298;66299;66300;66301;66302;66303;66304;66305;66306;66307;66308;66309;66310 66301 3019 15 DYDDMSPR Unmodified 997.38111 0.38111022 1868 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.596 26.797 2 0.011851 28765 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 117.18 112.32 811730000 0 0 0 27342000 32474000 68438000 54331000 42285000 29314000 91302000 80946000 111970000 56599000 63230000 153500000 9754 1868 8883 82834;82835;82836;82837;82838;82839;82840;82841;82842;82843;82844;82845 66311;66312;66313;66314;66315;66316;66317;66318;66319;66320;66321;66322 66319 10 DYDEEEQGYDSEK Unmodified 1605.5955 0.59545591 2115 Q05519 SRSF11 Serine/arginine-rich splicing factor 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 26.813 27.069 2 1.0187E-12 28261 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 150.94 127.62 38939000 0 0 0 0 2940500 3225400 3193600 0 4287600 0 3829800 5589000 3990500 5809900 6072900 9755 2115 8884 82846;82847;82848;82849;82850;82851;82852;82853;82854;82855;82856 66323;66324;66325;66326;66327;66328;66329;66330;66331;66332;66333 66326 11 DYDMALK Oxidation (M) 870.37932 0.3793193 2895 Q6N069 NAA16 N-alpha-acetyltransferase 16, NatA auxiliary subunit yes yes 0 1 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 25.385 25.545 2 0.025786 26748 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 69.176 26.109 141240000 0 0 0 0 8084000 6615100 13530000 16771000 11563000 19783000 22778000 42113000 0 0 0 9756 2895 8885 82857;82858;82859;82860;82861;82862;82863;82864 66334;66335 66335 2 DYDPVAAR Unmodified 905.4243 0.42429566 2564 Q15691 MAPRE1 Microtubule-associated protein RP/EB family member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.187 30.378 2 0.0047119 33394 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 109.63 100.28 476020000 0 0 0 18368000 16595000 43552000 31955000 22036000 16432000 49754000 51091000 45150000 35356000 48874000 96859000 9757 2564 8886 82865;82866;82867;82868;82869;82870;82871;82872;82873;82874;82875;82876 66336;66337;66338;66339;66340;66341;66342;66343;66344;66345;66346;66347 66337 9 DYDPVAARQGQETAVAPSLVAPALNK Unmodified 2680.382 0.3820435 2564 Q15691 MAPRE1 Microtubule-associated protein RP/EB family member 1 yes yes 0 0 1 By matching By MS/MS 2 0 2 1 1 82.275 78.651 3 0.014644 95446 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 24.963 21.064 66327000 0 60516000 5811300 0 0 0 0 0 0 0 0 0 0 0 0 9758 2564 8887 82877;82878 66348 66348 1 DYDPVAARQGQETAVAPSLVAPALNKPK Unmodified 2905.5298 0.52977037 2564 Q15691 MAPRE1 Microtubule-associated protein RP/EB family member 1 yes yes 0 0 2 By MS/MS 2 0 1 1 78.25 75.622 4 0.0014073 91881 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 28.145 18.812 8518500 0 0 8518500 0 0 0 0 0 0 0 0 0 0 0 0 9759 2564 8888 82879 66349 66349 1 DYDRGYDSR Unmodified 1145.4738 0.47376505 1166 P23588 EIF4B Eukaryotic translation initiation factor 4B yes yes 0 0 1 By MS/MS By matching By MS/MS 10 0 3 1 1 1 12.919 13.301 3 0.036628 11935 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.398 51.04 83015000 0 0 0 0 0 0 0 0 0 0 24974000 0 0 18721000 39320000 9760 1166 8889 82880;82881;82882 66350;66351 66350 0 DYDSFVLPLLEDK Unmodified 1552.7661 0.76609047 2190 Q12792 TWF1 Twinfilin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.43 2.72 4 2 1 2 3 1 1 97.824 94.16 2 1.0249E-40 116148 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 189.58 176.31 990480000 338350000 604800000 42705000 0 0 0 0 0 0 0 0 0 0 0 4623600 9761 2190 8890 82883;82884;82885;82886;82887;82888;82889 66352;66353;66354;66355;66356;66357;66358;66359 66352 8 DYDVEIR Unmodified 908.42396 0.42396131 1632 P50583 NUDT2 Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical] yes yes 0 0 0 By MS/MS 10 0 1 1 43.36 44.103 2 0.035265 48354 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.912 46.94 16909000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16909000 9762 1632 8891 82890 66360 66360 1 DYDWINAER Unmodified 1180.5149 0.51490158 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 64.149 64.167 2 0.0051666 73720 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 81.548 71.96 73834000 0 0 0 4381000 4894800 12623000 5761500 4900600 5026900 0 0 0 7180100 8563200 20503000 9763 643 8892 82891;82892;82893;82894;82895;82896;82897;82898;82899 66361;66362;66363;66364;66365;66366;66367;66368;66369;66370 66367 10 DYEAGQLYGLEK Unmodified 1384.6511 0.65106071 2961 Q6PKG0 LARP1 La-related protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 65.798 64.823 2 4.1761E-15 80247 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 147.74 115.98 300920000 0 191450000 0 9693800 6918900 8347200 10342000 10632000 9503800 23458000 17233000 0 13341000 0 0 9764 2961 8893 82900;82901;82902;82903;82904;82905;82906;82907;82908;82909;82910;82911 66371;66372;66373;66374;66375;66376;66377;66378;66379;66380;66381;66382;66383 66375 13 DYEEIGPSICR Unmodified 1337.5922 0.59216562 1835 P61158 ACTR3 Actin-related protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 58.09 55.746 2 0.0010688 65302 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 75.294 69.031 62229000 0 43743000 0 12092000 6394000 0 0 0 0 0 0 0 0 0 0 9765 1835 8894 82912;82913;82914;82915;82916;82917;82918;82919;82920 66384;66385;66386;66387;66388;66389;66390;66391;66392;66393 66391 10 DYEEIGPSICRHNPVFGVMS Unmodified 2306.046 0.045987275 1835 P61158 ACTR3 Actin-related protein 3 yes yes 0 0 1 By MS/MS By MS/MS By matching 2 0 3 1 1 1 87.165 82.03 3 2.0497E-08 104151 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.027 70.357 107380000 86584000 18587000 2208500 0 0 0 0 0 0 0 0 0 0 0 0 9766 1835 8895 82921;82922;82923 66394;66395 66395 2 DYEEIGPSICRHNPVFGVMS Oxidation (M) 2322.0409 0.040901897 1835 P61158 ACTR3 Actin-related protein 3 yes yes 0 1 1 By MS/MS 2 0 1 1 82.68 74.549 3 1.4497E-06 97455 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.43 65.097 139060000 139060000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9767 1835 8895 82924 66396 66396 2975 1 DYEETELISTTANYR Unmodified 1803.8163 0.81628814 2236 Q13123 IK Protein Red yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.044 74.105 2 5.0932E-20 84961 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 142.1 122.44 89015000 0 0 0 3384300 5134700 9345100 4829100 4513800 5999100 11026000 10182000 11623000 5128700 4020700 13829000 9768 2236 8896 82925;82926;82927;82928;82929;82930;82931;82932;82933;82934;82935;82936 66397;66398;66399;66400;66401;66402;66403;66404;66405;66406;66407 66400 11 DYEETELISTTANYRAVGPTAEADK Unmodified 2743.2824 0.28244861 2236 Q13123 IK Protein Red yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 79.506 74.102 3 1.307E-46 93323 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.838 87.284 47318000 15450000 31868000 0 0 0 0 0 0 0 0 0 0 0 0 0 9769 2236 8897 82937;82938;82939 66408;66409;66410 66408 3 DYEEVGADSADGEDEGEEY Unmodified 2077.7396 0.73961354 4093 Q9BQE3 TUBA1C Tubulin alpha-1C chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 1 2 2 2 2 1 2 1 2 3 54.017 54.16 2 5.1718E-12 62424 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 89.403 89.403 747850000 0 0 0 69499000 71825000 103380000 38543000 47473000 33288000 42086000 60618000 85764000 57842000 39322000 98212000 9770 4093 8898 82940;82941;82942;82943;82944;82945;82946;82947;82948;82949;82950;82951;82952;82953;82954;82955;82956;82957;82958;82959;82960;82961 66411;66412;66413;66414;66415;66416;66417;66418;66419;66420;66421;66422;66423;66424;66425;66426;66427;66428;66429;66430 66411 19 DYEEVGVDSVEGEGEEEGEEY Unmodified 2347.8976 0.89757075 1961;3031 P68363;Q71U36 TUBA1B;TUBA1A Tubulin alpha-1B chain;Tubulin alpha-1A chain no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.41 3.38 3 1 18 4 1 2 1 3 1 1 2 2 1 1 2 1 77.084 77.488 2;3;4 3.3877E-72 83578 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 145.01 140.21 3159900000 2730200000 0 0 34077000 92104000 44567000 26140000 23263000 15310000 35659000 35621000 40897000 11145000 23900000 46959000 9771 1961;3031 8899 82962;82963;82964;82965;82966;82967;82968;82969;82970;82971;82972;82973;82974;82975;82976;82977;82978;82979;82980;82981;82982;82983 66431;66432;66433;66434;66435;66436;66437;66438;66439;66440;66441;66442;66443;66444;66445;66446;66447;66448;66449;66450;66451;66452;66453 66441 22 DYEIESQNPLASPTNTLLGSAK Unmodified 2347.1543 0.15433498 3091 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.56 1 1 13 2 1 1 1 1 2 1 2 2 2 85.456 85.013 2;3 1.2699E-10 103586 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.045 73.868 134290000 0 66731000 0 0 3602200 3979900 3575100 6569400 0 9411300 6143800 11019000 0 7215600 16039000 9772 3091 8900 82984;82985;82986;82987;82988;82989;82990;82991;82992;82993;82994;82995;82996;82997;82998 66454;66455;66456;66457;66458;66459;66460;66461;66462 66455 9 DYEILFK Unmodified 926.47493 0.47493425 3667 Q92820 GGH Gamma-glutamyl hydrolase yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.845 75.908 2 0.026085 87547 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 79.454 10.021 160910000 0 0 0 20820000 7534700 9597800 8922200 20942000 6954700 14724000 12512000 19120000 14441000 9367300 15978000 9773 3667 8901 82999;83000;83001;83002;83003;83004;83005;83006;83007;83008;83009;83010 66463;66464;66465;66466;66467;66468;66469;66470 66465 8 DYELQLVTYK Unmodified 1270.6445 0.64451877 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.968 77.03 2 0.00091218 88066 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 114.84 40.91 56751000 0 0 0 4006600 3832700 3749400 3154100 4021700 3894900 5178800 5263400 6941900 3820300 3982500 8904900 9774 2501 8902 83011;83012;83013;83014;83015;83016;83017;83018;83019;83020;83021;83022 66471;66472;66473;66474;66475;66476;66477;66478;66479;66480;66481 66477 10 DYEMNANHK Unmodified 1120.4608 0.46075752 4697 Q9NWH9 SLTM SAFB-like transcription modulator yes yes 0 0 0 By MS/MS 2 0 1 1 13.56 10.246 2 0.050439 13857 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.324 38.431 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9775 4697 8903 83023 66482 66482 1 DYENDEDVNK Unmodified 1239.4891 0.48914034 347 O43617 TRAPPC3 Trafficking protein particle complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.88 3.69 2 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 27.149 27.188 2 0.00053155 14388 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 133.58 114.81 223990000 54790000 85814000 0 3525800 2161800 4348500 3828600 3991300 2667100 6290700 10855000 9224600 8152400 10876000 17465000 9776 347 8904 83024;83025;83026;83027;83028;83029;83030;83031;83032;83033;83034;83035;83036;83037;83038;83039 66483;66484;66485;66486;66487;66488;66489;66490;66491;66492;66493;66494;66495;66496;66497 66492 15 DYERVLELEPNNFEATNELRK Unmodified 2578.2663 0.26634504 4425 Q9H6T3 RPAP3 RNA polymerase II-associated protein 3 yes yes 0 0 2 By MS/MS 2 0 2 2 84.274 76.144 3;4 8.1093E-08 99521 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.029 70.158 45665000 45665000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9777 4425 8905 83040;83041 66498;66499 66499 2 DYETATLSDIK Unmodified 1254.598 0.59796251 356 O43707 ACTN4 Alpha-actinin-4 yes yes 0 0 0 By MS/MS 10 0 1 1 59.573 59.955 2 0.051208 68289 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 48.091 31.947 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9778 356 8906 83042 66500 66500 1 DYETATLSEIK Unmodified 1268.6136 0.61361257 971 P12814 ACTN1 Alpha-actinin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 64.222 62.73 2 8.0334E-10 80211 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 147.2 132.42 2114700000 28506000 1849000000 0 6894700 0 15237000 8058100 7680500 6564800 14489000 26760000 39911000 11407000 22151000 78044000 9779 971 8907 83043;83044;83045;83046;83047;83048;83049;83050;83051;83052;83053;83054;83055;83056;83057;83058 66501;66502;66503;66504;66505;66506;66507;66508;66509;66510;66511;66512;66513;66514;66515;66516;66517;66518;66519 66510 19 DYEVELLR Unmodified 1035.5237 0.52367535 1053 P17480 UBTF Nucleolar transcription factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 2 1 1 1 71.325 71.332 2 0.015495 81714 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 68.787 57.147 373890000 0 0 0 35122000 33166000 51293000 28080000 34168000 27431000 44533000 0 120100000 0 0 0 9780 1053 8908 83059;83060;83061;83062;83063;83064;83065;83066;83067;83068 66520;66521;66522;66523;66524;66525;66526;66527;66528;66529 66528 9 DYEVELLRFLESLPEEEQQRVLGEEK Unmodified 3176.5877 0.58773876 1053 P17480 UBTF Nucleolar transcription factor 1 yes yes 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 101.5 95.079 3;4 4.9549E-206 119917 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 224.93 208.79 50958000 42813000 8145100 0 0 0 0 0 0 0 0 0 0 0 0 0 9781 1053 8909 83069;83070 66530;66531 66531 2 DYFDMFAPK Unmodified 1132.4899 0.48993238 1558 P49023 PXN Paxillin yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 87.363 83.726 2 0.038052 103868 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 61.962 45.186 65197000 0 63977000 1220700 0 0 0 0 0 0 0 0 0 0 0 0 9782 1558 8910 83071;83072 66532 66532 1 DYFDMFAPK Oxidation (M) 1148.4848 0.48484701 1558 P49023 PXN Paxillin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 75.146 75.325 2 0.036701 86402 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.778 30.311 12046000 0 0 0 0 0 0 0 0 0 0 0 0 1897500 3779900 6368400 9783 1558 8910 83073;83074;83075 66533 66533 1 DYFEEYGK Unmodified 1049.4342 0.43419164 1141 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 49.281 49.622 2 0.011082 55873 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 77.741 71.428 78085000 0 0 0 0 0 0 0 7587500 0 8267800 23472000 0 0 15667000 23090000 9784 1141 8911 83076;83077;83078;83079;83080 66534;66535;66536;66537;66538 66536 5 DYFEQYGK Unmodified 1048.4502 0.45017606 891 P09651;Q32P51 HNRNPA1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 47.304 47.47 2 0.012727 53581 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 73.975 52.015 134260000 0 0 0 5467300 4983600 6312000 8323100 6769700 0 7643000 21957000 18260000 10041000 12184000 32315000 9785 891 8912 83081;83082;83083;83084;83085;83086;83087;83088;83089;83090;83091 66539;66540;66541;66542;66543;66544;66545;66546;66547 66540 9 DYFGAHTYELLAK Unmodified 1526.7405 0.74054442 1680 P52209 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes yes 0 0 0 By MS/MS By MS/MS 10 0 3 1 2 77.508 77.725 2;3 3.8811E-05 89229 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.719 82.453 102220000 0 0 0 0 0 0 0 0 0 0 0 0 0 8688400 93534000 9786 1680 8913 83092;83093;83094 66548;66549 66549 2 DYFLFRDGDILGK Unmodified 1557.7827 0.78274359 1853 P61604 HSPE1 10 kDa heat shock protein, mitochondrial yes yes 0 0 1 By MS/MS 2 0 1 1 92.55 84.42 3 0.022477 109244 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 41.644 30.373 126130000 126130000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9787 1853 8914 83095 66550 66550 1 DYFLIVIQNPTE Unmodified 1450.7344 0.73439641 4542 Q9NP97 DYNLRB1 Dynein light chain roadblock-type 1 yes yes 0 0 0 By MS/MS 1.5 0.5 1 1 2 102.13 100.7 2 3.0986E-14 92354 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 140.17 132.24 26681000 26681000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9788 4542 8915 83096;83097 66551;66552;66553 66551 3 DYFNVPYPLPK Unmodified 1351.6812 0.68123863 1771 P55786;A6NEC2 NPEPPS;NPEPPSL1 Puromycin-sensitive aminopeptidase;Puromycin-sensitive aminopeptidase-like protein yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.91 3.42 2 1 8 1 2 1 1 1 1 1 1 1 1 85.86 85.933 2 1.0911E-05 105697 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.23 115.7 64523000 0 0 0 2706300 0 2119500 0 2379600 0 1902500 7357300 5566200 0 6182400 36309000 9789 1771 8916 83098;83099;83100;83101;83102;83103;83104;83105;83106;83107;83108 66554;66555;66556;66557;66558;66559;66560;66561;66562;66563;66564;66565 66556 12 DYGDLPFADIPNDSPFQIVK Unmodified 2250.0845 0.084464496 794 P05089 ARG1 Arginase-1 yes yes 0 0 0 By MS/MS 10 0 1 1 97.14 96.928 2 9.8657E-05 112394 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 51.211 44.172 2285800 0 0 0 2285800 0 0 0 0 0 0 0 0 0 0 0 9790 794 8917 83109 66566 66566 1 DYGEFEVDDGTSVLLK Unmodified 1785.8309 0.83087557 2436 Q14691 GINS1 DNA replication complex GINS protein PSF1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.5 0.5 2 2 2 1 1 85.865 81.516 2 2.9319E-31 102857 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 131.17 115.21 27782000 21978000 3893500 1910400 0 0 0 0 0 0 0 0 0 0 0 0 9791 2436 8918 83110;83111;83112;83113 66567;66568;66569;66570 66569 4 DYGHSSSRDDYPSR Unmodified 1640.6815 0.68152599 1395 P38159;Q96E39 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 1 2 2 2 2 13.98 14.127 3;4 0.0013138 13228 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 53.377 48.486 148160000 0 0 0 9483400 12017000 10713000 8165500 8352300 7918000 15917000 4669200 14928000 12732000 14499000 28763000 9792 1395 8919 83114;83115;83116;83117;83118;83119;83120;83121;83122;83123;83124;83125;83126;83127;83128;83129;83130;83131;83132;83133;83134;83135;83136 66571;66572;66573;66574;66575;66576 66576 6 DYGNSPLHR Unmodified 1057.4941 0.49410656 1208 P26599 PTBP1 Polypyrimidine tract-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.779 22.984 2 0.0043077 22720 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 87.251 73.603 1353900000 0 0 0 52008000 39187000 63542000 61548000 60785000 64979000 148060000 116480000 156980000 141030000 157620000 291660000 9793 1208 8920 83137;83138;83139;83140;83141;83142;83143;83144;83145;83146;83147;83148 66577;66578;66579;66580;66581;66582;66583;66584;66585;66586;66587;66588 66584 5 DYGVLLEGSGLALR Unmodified 1461.7827 0.78274359 1265 P30048 PRDX3 Thioredoxin-dependent peroxide reductase, mitochondrial yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 87.682 87.854 2 9.7585E-08 101639 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.258 76.587 8215900 0 0 0 0 0 0 0 0 641170 0 0 0 0 0 7574700 9794 1265 8921 83149;83150 66589 66589 1 DYGVYLEDSGHTLR Unmodified 1623.7529 0.75290002 2245 Q13162 PRDX4 Peroxiredoxin-4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 6 24 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 65.644 64.999 2;3 1.1902E-49 73736 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 174.24 153.94 936660000 13385000 50428000 15918000 28322000 20053000 38447000 35123000 36313000 37342000 48821000 93037000 160300000 43953000 87957000 227260000 9795 2245 8922 83151;83152;83153;83154;83155;83156;83157;83158;83159;83160;83161;83162;83163;83164;83165;83166;83167;83168;83169;83170;83171;83172;83173;83174;83175;83176;83177;83178;83179;83180 66590;66591;66592;66593;66594;66595;66596;66597;66598;66599;66600;66601;66602;66603;66604;66605;66606;66607;66608;66609;66610;66611;66612;66613;66614;66615;66616;66617;66618;66619;66620;66621;66622 66613 29 DYGVYLEDSGHTLRGLFIIDDK Unmodified 2525.2438 0.24381868 2245 Q13162 PRDX4 Peroxiredoxin-4 yes yes 0 0 1 By MS/MS By MS/MS 2.57 0.495 3 4 4 3 95.246 90.307 3;4 2.342E-74 114147 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 115.42 111 196740000 169040000 27698000 0 0 0 0 0 0 0 0 0 0 0 0 0 9796 2245 8923 83181;83182;83183;83184;83185;83186;83187 66623;66624;66625;66626;66627;66628;66629;66630 66629 7 DYHFKVDNDENEHQLSLR Unmodified 2258.0352 0.035222893 830 P06748 NPM1 Nucleophosmin yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS 5 3.87 5 3 3 1 1 3 59.31 57.496 3;4 1.2386E-76 77305 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 185.25 181.86 153210000 59331000 268640 204260 0 0 0 0 0 0 0 0 0 0 0 93408000 9797 830 8924 83188;83189;83190;83191;83192;83193;83194;83195 66631;66632;66633;66634;66635;66636;66637;66638;66639 66638 9 DYHNLFSPR Unmodified 1147.5411 0.54105675 1558 P49023 PXN Paxillin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 56.915 56.142 3 0.031382 62329 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.541 27.616 90148000 13085000 0 2543200 3760200 0 4275600 2994900 3040900 3272300 5626900 7806900 11765000 6704700 7175800 18097000 9798 1558 8925 83196;83197;83198;83199;83200;83201;83202;83203;83204;83205;83206;83207;83208 66640;66641;66642;66643;66644;66645 66641 6 DYHSYMLQISK Unmodified 1383.6493 0.64928657 594 O94864 SUPT7L STAGA complex 65 subunit gamma yes yes 0 0 0 By MS/MS 2 0 1 1 73.91 65.714 3 0.001542 87006 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.641 47.764 14074000 14074000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9799 594 8926 83209 66646 66646 1 DYIAYAHSTIMPR Unmodified 1536.7395 0.73949856 1332 P33991 MCM4 DNA replication licensing factor MCM4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 68.436 68.68 3 0.00036902 78857 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 77.185 62.394 50879000 0 0 0 0 0 0 0 0 5206300 9623600 16490000 19560000 0 0 0 9800 1332 8927 83210;83211;83212;83213;83214 66647;66648;66649;66650 66648 3 DYIDGVYDNAEYAER Unmodified 1791.7588 0.75877326 2995 Q6YHK3 CD109 CD109 antigen yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 69.77 69.815 2 0.0012663 79725 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.088 59.198 37660000 0 0 0 1881000 3345300 3380800 3043800 3119000 0 3220300 0 7331800 3329700 4378700 4630000 9801 2995 8928 83215;83216;83217;83218;83219;83220;83221;83222;83223;83224 66651;66652;66653;66654;66655;66656;66657;66658 66653 8 DYIEEEVIDEK Unmodified 1380.6297 0.62965657 2484 Q15042 RAB3GAP1 Rab3 GTPase-activating protein catalytic subunit yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 65.462 65.582 2 0.029853 74450 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.705 36.568 55742000 0 0 0 5577200 0 5938200 6087300 4180000 0 6320100 0 7315300 4641800 5967100 9714800 9802 2484 8929 83225;83226;83227;83228;83229;83230;83231;83232;83233 66659;66660 66659 2 DYIEFNK Unmodified 927.4338 0.43379771 1185 P25311 AZGP1 Zinc-alpha-2-glycoprotein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 50.186 50.324 2 0.023373 56813 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 88.643 53.442 691390000 0 0 0 212270000 41561000 31776000 39333000 84376000 0 58367000 49220000 98587000 0 42629000 33270000 9803 1185 8930 83234;83235;83236;83237;83238;83239;83240;83241;83242;83243 66661;66662;66663;66664;66665;66666;66667;66668;66669;66670;66671;66672;66673;66674;66675 66662 15 DYILEGEPGK Unmodified 1119.5448 0.54480473 4895 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 50.276 50.243 2 0.009388 57642 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 57.859 37.2 26049000 0 0 0 2802600 0 0 0 0 0 0 0 0 5085300 18161000 0 9804 4895 8931 83244;83245;83246 66676;66677 66677 2 DYIMEPSIFNTLK Oxidation (M) 1585.7698 0.76979564 3258 Q8IXH7 NELFCD Negative elongation factor C/D yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 86.67 86.771 2 8.9498E-07 100506 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 91.549 87.786 100940000 0 0 0 0 4304800 8048800 0 7538100 7531000 15555000 9631100 12511000 6921000 7371200 21527000 9805 3258 8932 83247;83248;83249;83250;83251;83252;83253;83254;83255;83256;83257;83258 66678;66679;66680;66681;66682;66683;66684;66685;66686;66687;66688;66689;66690;66691;66692;66693 66678 4874 16 DYIMEPSIFNTLK Unmodified 1569.7749 0.77488102 3258 Q8IXH7 NELFCD Negative elongation factor C/D yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 90.863 91.031 2 0.0016512 105447 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.303 53.816 4441500 0 0 0 0 0 0 0 837330 0 0 0 0 0 0 3604200 9806 3258 8932 83259;83260 66694;66695 66695 2 DYIPGAEVLEVEK Unmodified 1460.7399 0.73987572 4684 Q9NVU7 SDAD1 Protein SDA1 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 83.571 78.85 2 0.032861 98039 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 45.653 29.455 26659000 0 26659000 0 0 0 0 0 0 0 0 0 0 0 0 0 9807 4684 8933 83261 66696 66696 1 DYIPVDQEELRDYVK Unmodified 1880.9156 0.91560825 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.79 3.78 5 3 11 4 3 1 1 1 1 1 1 1 1 1 1 1 1 79.318 77.596 2;3 4.1793E-09 97258 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 122.7 108.02 397510000 79009000 127860000 13752000 0 6031800 19523000 4217300 13928000 12433000 24171000 11570000 19631000 6877200 14917000 43593000 9808 2392 8934 83262;83263;83264;83265;83266;83267;83268;83269;83270;83271;83272;83273;83274;83275;83276;83277;83278;83279;83280 66697;66698;66699;66700;66701;66702;66703;66704;66705;66706;66707;66708;66709;66710;66711;66712;66713;66714 66707 18 DYIRTQIISK Unmodified 1235.6874 0.68738664 130 O00232 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 54.319 48.284 2 0.00011543 66058 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 147.74 81.474 57538000 55381000 0 2156800 0 0 0 0 0 0 0 0 0 0 0 0 9809 130 8935 83281;83282 66715 66715 0 DYIVALQHPVTTDIK Unmodified 1711.9145 0.91448604 5075 Q9Y223 GNE Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase;UDP-N-acetylglucosamine 2-epimerase (hydrolyzing);N-acetylmannosamine kinase yes yes 0 0 0 By MS/MS 2 0 2 2 77.558 74.868 2;3 0.013025 91066 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 48.741 33.865 17021000 0 0 17021000 0 0 0 0 0 0 0 0 0 0 0 0 9810 5075 8936 83283;83284 66716;66717 66716 1 DYIVVGSDSGR Unmodified 1166.5568 0.5567664 2528 Q15393 SF3B3 Splicing factor 3B subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 44.541 44.78 2 0.00051485 50075 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 82.749 66.276 274680000 0 0 0 0 11418000 15495000 13520000 19073000 17041000 23548000 29545000 36348000 22272000 29722000 56700000 9811 2528 8937 83285;83286;83287;83288;83289;83290;83291;83292;83293;83294;83295;83296 66718;66719;66720;66721;66722;66723;66724;66725;66726;66727;66728;66729;66730;66731;66732;66733 66720 15 DYIVVGSDSGRIVILEYQPSK Unmodified 2337.2216 0.22162668 2528 Q15393 SF3B3 Splicing factor 3B subunit 3 yes yes 0 0 1 By MS/MS 2.67 0.471 1 2 3 88.708 83.618 3 0.00034763 106127 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.009 49.205 43924000 43924000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9812 2528 8938 83297;83298;83299 66734;66735;66736;66737 66737 3 DYLIDGSR Unmodified 937.45051 0.45051041 1073 P18206 VCL Vinculin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 41.971 42.124 2 0.036499 46863 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 51.854 13.063 35572000 0 0 0 0 0 11656000 5308800 0 0 12573000 0 0 6034800 0 0 9813 1073 8939 83300;83301;83302;83303 66738;66739 66738 2 DYLLCDYNR Unmodified 1230.5339 0.53392246 1525 P47756 CAPZB F-actin-capping protein subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61 61.103 2 0.0037643 68911 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.253 93.829 88163000 0 0 0 6713000 4940000 4376300 4215300 6069800 3397200 8165900 10359000 13156000 8899700 6578800 11292000 9814 1525 8940 83304;83305;83306;83307;83308;83309;83310;83311;83312;83313;83314;83315 66740;66741;66742;66743;66744;66745;66746;66747;66748;66749;66750;66751 66743 12 DYLLCDYNRDGDSYR Unmodified 1923.8057 0.80574023 1525 P47756 CAPZB F-actin-capping protein subunit beta yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 62.375 62.456 3 0.0009131 71189 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 53.403 51.279 41893000 0 0 0 2877500 2034100 4033000 0 3655500 0 0 2946200 7172500 4117900 4384500 10672000 9815 1525 8941 83316;83317;83318;83319;83320;83321;83322;83323;83324 66752;66753;66754;66755;66756;66757 66756 6 DYLLDDGTLVVSGR Unmodified 1521.7675 0.76748745 541 O75794 CDC123 Cell division cycle protein 123 homolog yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 81.486 81.547 2 0.0013852 94396 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 63.408 44.165 6189500 0 0 0 0 0 3524200 0 0 0 0 0 0 0 2665300 0 9816 541 8942 83325;83326;83327 66758;66759 66758 2 DYLLMEEEFIR Oxidation (M) 1472.6857 0.68573166 1875 P62191 PSMC1 26S protease regulatory subunit 4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 83.662 83.779 2 0.0003673 97010 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 81.338 62.558 36123000 0 0 0 0 0 5484500 0 0 0 11900000 9600900 9137200 0 0 0 9817 1875 8943 83328;83329;83330;83331;83332 66760;66761;66762;66763;66764;66765 66763 3032 6 DYLLMEEEFIRNQEQMK Oxidation (M) 2231.0239 0.023854849 1875 P62191 PSMC1 26S protease regulatory subunit 4 yes yes 0 1 1 By MS/MS 2 0 1 1 90.859 82.729 3 0.0048797 107367 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 44.299 36.402 14408000 14408000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9818 1875 8944 83333 66766 66766 3032;3033 1 DYLLMEEEFIRNQEQMK Unmodified 2215.0289 0.028940227 1875 P62191 PSMC1 26S protease regulatory subunit 4 yes yes 0 0 1 By MS/MS 2 0 1 1 93.118 84.988 3 8.8967E-14 110152 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 112.5 104.8 7820300 7820300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9819 1875 8944 83334 66767 66767 1 DYLQAEK Unmodified 865.41815 0.41814765 2947 Q6PGP7 TTC37 Tetratricopeptide repeat protein 37 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching 10 0 5 1 1 1 1 1 24.269 24.294 2 0.044016 25426 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 66.993 33.478 10614000 0 0 0 1449400 1334500 2540100 0 0 0 4051200 1238700 0 0 0 0 9820 2947 8945 83335;83336;83337;83338;83339 66768 66768 1 DYMDTLPPTVGDDVGK Unmodified 1721.7818 0.78181689 2620 Q16630 CPSF6 Cleavage and polyadenylation specificity factor subunit 6 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS 10 0 5 1 1 2 1 75.754 75.92 2 0.0010326 87122 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.04 42.06 25198000 0 0 0 0 0 0 2755300 0 0 4392200 0 0 0 9725300 8325000 9821 2620 8946 83340;83341;83342;83343;83344 66769;66770;66771 66769 2 DYMDTLPPTVGDDVGK Oxidation (M) 1737.7767 0.77673151 2620 Q16630 CPSF6 Cleavage and polyadenylation specificity factor subunit 6 yes yes 0 1 0 By MS/MS 10 0 1 1 65.113 65.665 2 0.00041171 74522 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.624 54.192 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9822 2620 8946 83345 66772 66772 4275 1 DYMRQAGEVTYADAHK Unmodified 1853.8366 0.83664643 2149 Q08170 SRSF4 Serine/arginine-rich splicing factor 4 yes yes 0 0 1 By MS/MS 2 0 1 1 46.671 42.819 3 0.00030013 54053 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 70.784 12.537 6551100 0 0 6551100 0 0 0 0 0 0 0 0 0 0 0 0 9823 2149 8947 83346 66773 66773 1 DYNEAYNYYTK Unmodified 1442.599 0.59902514 4035 Q99615 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 50.695 50.024 2 7.8916E-07 61534 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 148.91 136.32 304410000 0 124320000 0 10884000 12000000 0 17134000 15352000 0 0 37547000 0 0 26980000 60196000 9824 4035 8948 83347;83348;83349;83350;83351;83352;83353;83354;83355 66774;66775;66776;66777;66778;66779;66780;66781;66782;66783;66784;66785 66775 12 DYNHWLATK Unmodified 1146.5458 0.54580778 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 55.123 49.077 2 0.019932 67225 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 113.71 78.882 59012000 45178000 0 13834000 0 0 0 0 0 0 0 0 0 0 0 0 9825 1300 8949 83356;83357 66786 66786 0 DYNPYPYSDAINTYDK Unmodified 1937.8319 0.8319382 3094 Q7Z460 CLASP1 CLIP-associating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 74.232 74.289 2 0.0047749 85772 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 42.809 31.904 23835000 0 0 0 0 2610300 0 3234200 0 0 5654200 4791200 0 4203800 3341400 0 9826 3094 8950 83358;83359;83360;83361;83362;83363 66787;66788;66789;66790;66791 66787 5 DYNVTANSK Unmodified 1010.4669 0.46688876 719 P00338 LDHA L-lactate dehydrogenase A chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.17 4.02 3 3 12 3 2 1 1 1 1 1 1 1 1 1 1 1 1 1 32.358 32.53 2 5.2567E-05 92552 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 153.04 136.56 3792900000 2220100000 705510000 26676000 15354000 10080000 9997200 10583000 13033000 7947700 13106000 139710000 112290000 26095000 98405000 384060000 9827 719 8951 83364;83365;83366;83367;83368;83369;83370;83371;83372;83373;83374;83375;83376;83377;83378;83379;83380;83381 66792;66793;66794;66795;66796;66797;66798;66799;66800;66801;66802;66803;66804;66805;66806;66807;66808;66809;66810 66798 19 DYPAHTEEDK Unmodified 1203.5044 0.50439647 3793 Q96DB5 RMDN1 Regulator of microtubule dynamics protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 10.8 7.4814 2 0.0096277 10313 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.064 54.764 40506000 0 40506000 0 0 0 0 0 0 0 0 0 0 0 0 0 9828 3793 8952 83382;83383 66811;66812 66811 2 DYPDFSPSVDAEAIQK Unmodified 1780.8156 0.81555986 968 P12429 ANXA3 Annexin A3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 76.035 76.238 2 3.3452E-05 87552 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.279 53.292 37757000 0 0 0 0 0 0 0 2473000 0 0 7648800 7464100 0 4011300 16160000 9829 968 8953 83384;83385;83386;83387;83388 66813;66814;66815;66816 66813 4 DYPHSAFTLEK Unmodified 1306.6194 0.61936665 2305 Q13506 NAB1 NGFI-A-binding protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS 2 0 3 1 1 1 61.092 55.11 3 0.0072396 71241 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 56.551 50.403 19964000 2311100 13828000 3825300 0 0 0 0 0 0 0 0 0 0 0 0 9830 2305 8954 83389;83390;83391 66817 66817 1 DYPLIPVGK Unmodified 1000.5593 0.55933258 768 P04040 CAT Catalase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.934 72.997 2 0.040202 84482 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 44.447 44.447 170710000 0 0 0 25199000 9328300 10204000 5618000 28318000 7109200 16025000 11426000 23186000 16033000 8393200 9872700 9831 768 8955 83392;83393;83394;83395;83396;83397;83398;83399;83400;83401;83402;83403 66818 66818 1 DYPVVSIEDPFDQDDWGAWQK Unmodified 2509.1074 0.10738478 827 P06733 ENO1 Alpha-enolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.21 0.41 22 6 4 15 9 99.863 95.914 2;3 1.21E-52 115863 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 133.95 130.89 1131600000 399950000 461520000 270170000 0 0 0 0 0 0 0 0 0 0 0 0 9832 827 8956 83404;83405;83406;83407;83408;83409;83410;83411;83412;83413;83414;83415;83416;83417;83418;83419;83420;83421;83422;83423;83424;83425;83426;83427;83428;83429;83430;83431 66819;66820;66821;66822;66823;66824;66825;66826;66827;66828;66829;66830;66831;66832;66833;66834;66835;66836;66837;66838;66839;66840;66841;66842;66843;66844;66845;66846;66847;66848;66849;66850;66851;66852;66853;66854;66855 66844 35 DYQAMLGVK Unmodified 1023.5059 0.5059168 103 CON__Q7Z794;Q7Z794 KRT77 Keratin, type II cytoskeletal 1b yes no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 60.602 60.653 2 0.0083077 69194 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 69.998 50.152 + 28765000 0 0 0 5904000 0 0 2424100 4039700 0 6389200 0 10008000 0 0 0 9833 103 8957 83432;83433;83434;83435;83436;83437 66856;66857;66858;66859;66860 66856 5 DYQELMNTK Oxidation (M) 1156.507 0.50703901 780;50 CON__ENSEMBL:ENSBTAP00000038253;P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 34 5 3 2 2 7 2 2 2 2 3 2 2 30.016 30.131 2 8.2008E-07 28239 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 157.68 103.71 + 8987000000 0 0 0 1734400000 437270000 621660000 458070000 1342300000 323650000 733310000 563500000 1306600000 844590000 343480000 278050000 9834 50;780 8958 83438;83439;83440;83441;83442;83443;83444;83445;83446;83447;83448;83449;83450;83451;83452;83453;83454;83455;83456;83457;83458;83459;83460;83461;83462;83463;83464;83465;83466;83467;83468;83469;83470;83471 66861;66862;66863;66864;66865;66866;66867;66868;66869;66870;66871;66872;66873;66874;66875;66876;66877;66878;66879;66880;66881;66882;66883;66884;66885;66886;66887;66888;66889;66890;66891;66892;66893;66894;66895;66896;66897;66898;66899;66900 66888 42 39 DYQELMNTK Unmodified 1140.5121 0.51212439 780;50 CON__ENSEMBL:ENSBTAP00000038253;P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 2 2 1 1 1 1 2 1 1 1 1 47.953 48.038 2 0.00058158 53932 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 160.88 87.619 + 15635000000 0 0 0 2833600000 693940000 0 526190000 2567900000 485470000 1717600000 1074600000 2740900000 1547700000 614300000 833200000 9835 50;780 8958 83472;83473;83474;83475;83476;83477;83478;83479;83480;83481;83482;83483;83484;83485 66901;66902;66903;66904;66905;66906;66907;66908;66909;66910;66911;66912;66913;66914;66915;66916;66917;66918 66906 18 DYQELMNVK Oxidation (M) 1154.5278 0.52777445 79;96;960;2056;83 CON__P35908v2;P35908;CON__P35908;CON__Q01546;P12035;CON__P12035;Q01546;CON__Q5XKE5;Q5XKE5 KRT2;KRT3;KRT76;KRT79 Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 3;Keratin, type II cytoskeletal 2 oral;Keratin, type II cytoskeletal 79 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 27 2 2 2 3 3 2 2 2 2 3 2 2 39.849 40.03 2 1.4135E-05 44761 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 133.55 116.61 + 2925800000 0 0 0 487050000 176370000 245120000 148390000 283350000 151790000 245370000 237450000 431870000 303640000 111920000 103510000 9836 79;83;960;2056;96 8959 83486;83487;83488;83489;83490;83491;83492;83493;83494;83495;83496;83497;83498;83499;83500;83501;83502;83503;83504;83505;83506;83507;83508;83509;83510;83511;83512 66919;66920;66921;66922;66923;66924;66925;66926;66927;66928;66929;66930;66931;66932;66933;66934;66935;66936;66937;66938;66939;66940;66941;66942;66943;66944 66938 115 14 DYQELMNVK Unmodified 1138.5329 0.53285983 79;96;960;2056;83 CON__P35908v2;P35908;CON__P35908;CON__Q01546;P12035;CON__P12035;Q01546;CON__Q5XKE5;Q5XKE5 KRT2;KRT3;KRT76;KRT79 Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 3;Keratin, type II cytoskeletal 2 oral;Keratin, type II cytoskeletal 79 no no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.212 60.317 2 1.5924E-08 69447 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 159.04 138.76 + 3375600000 0 0 0 412760000 178450000 257150000 132670000 373330000 166760000 285790000 309760000 521140000 398980000 173470000 165350000 9837 79;83;960;2056;96 8959 83513;83514;83515;83516;83517;83518;83519;83520;83521;83522;83523;83524 66945;66946;66947;66948;66949;66950;66951;66952;66953;66954;66955;66956;66957;66958 66958 14 DYQGPLK Unmodified 819.41267 0.41266834 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 26.854 27.06 2 0.025135 28819 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 81.381 55.272 1340100000 0 0 0 55524000 121030000 0 370060000 0 328490000 93139000 134820000 195750000 0 10000000 31275000 9838 1714 8960 83525;83526;83527;83528;83529;83530;83531;83532;83533 66959;66960;66961;66962 66960 4 DYQSQEPLDLTK Unmodified 1435.6831 0.68308912 2708 Q53SF7 COBLL1 Cordon-bleu protein-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 2 1 1 1 1 57.695 57.686 2 2.5948E-05 65492 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 94.309 80.718 61612000 0 0 0 5854500 8269500 11811000 6914500 7654200 0 0 0 0 0 7055900 14052000 9839 2708 8961 83534;83535;83536;83537;83538;83539;83540;83541 66963;66964;66965;66966;66967;66968;66969 66965 7 DYRGALAYYK Unmodified 1218.6033 0.60332266 2945 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 51.104 51.248 3 0.022975 57511 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 33.89 20.299 99747000 0 0 0 4085300 3019300 0 7836900 10803000 7437500 0 16337000 18380000 0 12732000 19115000 9840 2945 8962 83542;83543;83544;83545;83546;83547;83548;83549;83550 66970;66971;66972;66973 66971 4 DYRQSSGASSSSFSSSR Unmodified 1794.7769 0.77688294 170 O00571 DDX3X ATP-dependent RNA helicase DDX3X yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 22.393 22.541 3 0.0010665 23193 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 49.537 41.623 41793000 0 0 0 2059700 2058400 3147300 4380400 3489100 3023800 4623200 6362400 7194000 5455000 0 0 9841 170 8963 83551;83552;83553;83554;83555;83556;83557;83558;83559;83560 66974;66975;66976;66977;66978;66979;66980;66981;66982 66981 9 DYSAPVNFISAGLK Unmodified 1480.7562 0.75619449 4834 Q9UBB9 TFIP11 Tuftelin-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 86.279 86.368 2 1.078E-05 99870 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.548 42.657 25712000 0 0 0 0 1228500 2302000 2419400 0 0 3452300 2694500 3710600 2212100 2673000 5019600 9842 4834 8964 83561;83562;83563;83564;83565;83566;83567;83568;83569;83570 66983;66984;66985;66986;66987;66988;66989;66990;66991;66992;66993 66987 11 DYSDITSSK Unmodified 1014.4506 0.45056999 1242 P29084 GTF2E2 Transcription initiation factor IIE subunit beta yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 7.75 3.9 1 3 1 1 1 1 45.219 46.961 2 0.0089221 25936 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.224 59.883 39448000 20609000 0 0 0 0 0 0 0 0 0 0 4300500 3553800 0 10984000 9843 1242 8965 83571;83572;83573;83574 66994;66995;66996;66997 66994 4 DYSGQGVVK Unmodified 951.46616 0.46616048 453 O75083 WDR1 WD repeat-containing protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 21.605 21.935 2 0.012801 21871 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.76 9.7234 92164000 0 0 0 4347400 0 0 0 0 0 0 26977000 0 0 13292000 47547000 9844 453 8966 83575;83576;83577;83578 66998;66999;67000 66998 3 DYSGYQR Unmodified 887.37735 0.37734547 2407 Q14444 CAPRIN1 Caprin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.923 15.094 2 0.034494 14362 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 71.258 46.901 436420000 0 0 0 29579000 22896000 24112000 39774000 30956000 33583000 40305000 56252000 41063000 49933000 34466000 33498000 9845 2407 8967 83579;83580;83581;83582;83583;83584;83585;83586;83587;83588;83589;83590 67001;67002 67001 2 DYSLLPLLAAAPQVGEK Unmodified 1783.972 0.97200092 1397 P38432 COIL Coilin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 2 96.691 96.829 2;3 4.8686E-19 112431 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 103.88 96.314 22133000 0 0 0 0 0 1085600 941320 1114300 1094100 4667100 3389300 1812200 0 0 8028900 9846 1397 8968 83591;83592;83593;83594;83595;83596;83597;83598;83599;83600 67003;67004;67005;67006;67007;67008;67009;67010;67011 67005 9 DYSMVESPLICK Oxidation (M) 1456.6578 0.65780235 3609 Q92503 SEC14L1 SEC14-like protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 21 2 2 2 2 1 2 1 2 2 2 2 1 64.281 64.342 2 1.842E-05 74366 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 96.665 86.433 165140000 0 0 0 11021000 13877000 11379000 15568000 5273300 12633000 7661300 16795000 33402000 22440000 12530000 2557500 9847 3609 8969 83601;83602;83603;83604;83605;83606;83607;83608;83609;83610;83611;83612;83613;83614;83615;83616;83617;83618;83619;83620;83621 67012;67013;67014;67015;67016;67017;67018;67019;67020;67021;67022;67023;67024;67025;67026;67027;67028;67029;67030;67031;67032 67032 5104 15 DYSMVESPLICK Unmodified 1440.6629 0.66288773 3609 Q92503 SEC14L1 SEC14-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.866 75.929 2 2.6618E-05 87526 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 116.52 102.75 209810000 0 0 0 5600700 12034000 13218000 11183000 16035000 11561000 16736000 20410000 30214000 23211000 18260000 31344000 9848 3609 8969 83622;83623;83624;83625;83626;83627;83628;83629;83630;83631;83632;83633 67033;67034;67035;67036;67037;67038;67039;67040;67041;67042;67043;67044;67045;67046 67041 14 DYSNFDQEFLNEK Unmodified 1647.7053 0.70528113 2116 Q05655 PRKCD Protein kinase C delta type;Protein kinase C delta type regulatory subunit;Protein kinase C delta type catalytic subunit yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS 10 0 5 1 1 1 1 1 77.455 77.594 2 1.8248E-05 89263 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.39 100.38 24554000 0 0 0 0 0 3887500 2141400 3691700 0 0 0 0 2534400 0 12299000 9849 2116 8970 83634;83635;83636;83637;83638 67047;67048 67048 2 DYSPYFK Unmodified 918.41233 0.41233399 56;70 CON__P02533;P02533;CON__P08779;P08779;CON__Q9Z2K1;CON__Q3ZAW8 KRT14;KRT16 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.452 49.61 2 0.024035 55957 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 83.614 38.641 + 7081100000 0 0 0 1354700000 360620000 326880000 287720000 823150000 245380000 538410000 470690000 483370000 1605000000 358520000 226690000 9850 56;70 8971 83639;83640;83641;83642;83643;83644;83645;83646;83647;83648;83649;83650 67049;67050;67051;67052;67053;67054;67055 67050 7 DYSPYYK Unmodified 934.40725 0.40724861 73;981 CON__P13646-1;P13646;CON__ENSEMBL:ENSP00000377550 KRT13 Keratin, type I cytoskeletal 13 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 33.723 34.044 2 0.033156 37387 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 72.234 57.012 + 49506000 0 0 0 0 0 0 16050000 21805000 0 0 0 6536100 5114500 0 0 9851 73;981 8972 83651;83652;83653;83654 67056;67057;67058 67058 3 DYSQYYR Unmodified 993.41921 0.41921028 84 CON__Q04695;Q04695 KRT17 Keratin, type I cytoskeletal 17 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.501 37.681 2 0.023657 41746 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 101.33 87.554 + 364910000 0 0 0 80808000 20361000 21332000 15874000 26266000 11148000 24532000 20164000 27080000 89733000 14125000 13491000 9852 84 8973 83655;83656;83657;83658;83659;83660;83661;83662;83663;83664;83665;83666 67059 67059 1 DYSSGFGGK Unmodified 916.39266 0.39266118 2399 Q14247 CTTN Src substrate cortactin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 25.823 25.982 2 0.016861 27451 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 56.177 45.063 215080000 0 0 0 13506000 17761000 14834000 13585000 13147000 14942000 22178000 27894000 34487000 23876000 18870000 0 9853 2399 8974 83667;83668;83669;83670;83671;83672;83673;83674;83675;83676;83677 67060;67061;67062 67061 3 DYSVTANSK Unmodified 983.45599 0.45598972 836 P07195 LDHB L-lactate dehydrogenase B chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.95 2 4 1 12 4 2 1 1 1 1 1 1 1 1 1 1 1 1 1 22.263 21.675 2 0.0011072 92494 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 140.09 130.85 4488200000 2594600000 682230000 29085000 10666000 12250000 14106000 16871000 16908000 9495000 21279000 211360000 194910000 21290000 159540000 493660000 9854 836 8975 83678;83679;83680;83681;83682;83683;83684;83685;83686;83687;83688;83689;83690;83691;83692;83693;83694;83695;83696 67063;67064;67065;67066;67067;67068;67069;67070;67071;67072;67073;67074;67075;67076;67077;67078;67079;67080;67081;67082 67070 15 DYTGALAVFTR Unmodified 1212.6139 0.61388734 1167 P23610 F8A1 Factor VIII intron 22 protein yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 82.729 82.752 2 0.0010688 95824 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 75.294 58.054 12211000 0 0 0 470720 708810 2247000 0 1607200 1082700 1564800 1727100 2802100 0 0 0 9855 1167 8976 83697;83698;83699;83700;83701;83702;83703;83704;83705 67083;67084;67085;67086;67087;67088 67083 6 DYTRPDLPSGDGQPALDPAIAAAFAK Unmodified 2656.3133 0.31329523 4960 Q9UKA9 PTBP2 Polypyrimidine tract-binding protein 2 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 87.834 87.964 3 1.6096E-06 101813 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.806 40.044 5668700 0 0 0 0 0 0 0 0 0 2146300 0 0 0 0 3522400 9856 4960 8977 83706;83707 67089;67090;67091 67091 3 DYTSGAMLTGELK Oxidation (M) 1400.6493 0.64934615 1155 P23381 WARS Tryptophan--tRNA ligase, cytoplasmic;T1-TrpRS;T2-TrpRS yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 62.735 55.663 2 0.0017151 71681 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.568 78.21 147750000 5347000 142400000 0 0 0 0 0 0 0 0 0 0 0 0 0 9857 1155 8978 83708;83709 67092;67093;67094;67095 67092 1668 4 DYTSGAMLTGELK Unmodified 1384.6544 0.65443153 1155 P23381 WARS Tryptophan--tRNA ligase, cytoplasmic;T1-TrpRS;T2-TrpRS yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 73.624 68.101 2 0.00036218 86066 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.69 104.27 627390000 14845000 611040000 1499300 0 0 0 0 0 0 0 0 0 0 0 0 9858 1155 8978 83710;83711;83712 67096;67097;67098;67099 67096 4 DYTSGAMLTGELKK Oxidation (M) 1528.7443 0.74430917 1155 P23381 WARS Tryptophan--tRNA ligase, cytoplasmic;T1-TrpRS;T2-TrpRS yes yes 0 1 1 By MS/MS 2.67 0.471 1 2 3 53.767 48.572 2;3 0.00044874 59968 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 61.423 51.772 27179000 0 27179000 0 0 0 0 0 0 0 0 0 0 0 0 0 9859 1155 8979 83713;83714;83715 67100;67101;67102 67101 1668 1 DYTSGAMLTGELKK Unmodified 1512.7494 0.74939455 1155 P23381 WARS Tryptophan--tRNA ligase, cytoplasmic;T1-TrpRS;T2-TrpRS yes yes 0 0 1 By MS/MS 2.33 0.471 2 1 3 65.059 59.532 2;3 0.0048854 76283 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 51.771 34.569 95806000 0 95806000 0 0 0 0 0 0 0 0 0 0 0 0 0 9860 1155 8979 83716;83717;83718 67103;67104 67103 0 DYTYEELLNR Unmodified 1314.6092 0.6091959 1099 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.337 75.396 2 0.0238 86783 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 57.708 45.861 74457000 0 0 0 3981600 4208100 4484800 7374600 4779200 3047900 4797800 6550900 9696000 3402300 5866200 16267000 9861 1099 8980 83719;83720;83721;83722;83723;83724;83725;83726;83727;83728;83729;83730 67105;67106;67107 67105 3 DYVAPTANLDQK Unmodified 1333.6514 0.65139506 3039 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 47.171 47.284 2 2.2979E-05 52776 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 102.52 93.185 202860000 0 0 0 12970000 9816900 31473000 15029000 13053000 9696900 22036000 27324000 22004000 15506000 23948000 0 9862 3039 8981 83731;83732;83733;83734;83735;83736;83737;83738;83739;83740;83741 67108;67109;67110;67111;67112;67113;67114;67115;67116;67117;67118;67119 67116 12 DYVAVAR Unmodified 792.413 0.41300269 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 28.498 28.601 2 0.035055 29873 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.54 25.229 373320000 0 0 0 36038000 27246000 44096000 35215000 0 0 0 0 101920000 68236000 60575000 0 9863 1986 8982 83742;83743;83744;83745;83746;83747;83748;83749 67120;67121 67120 2 DYVDEQTGDGPVK Unmodified 1421.6311 0.63105355 3892 Q96JG6 CCDC132 Coiled-coil domain-containing protein 132 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 36.254 36.501 2 0.011278 40362 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 57.348 46.184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9864 3892 8983 83750;83751 67122;67123 67123 2 DYVDLFR Unmodified 926.44978 0.44978213 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.756 76.849 2 0.020823 88114 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.74 72.639 564740000 0 0 0 650020 0 42870000 39311000 40846000 29504000 50724000 56965000 66819000 50496000 65847000 120710000 9865 1986 8984 83752;83753;83754;83755;83756;83757;83758;83759;83760;83761;83762 67124;67125;67126;67127;67128;67129;67130;67131 67127 8 DYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEK Unmodified 4024.8863 0.88630532 411 O60547 GMDS GDP-mannose 4,6 dehydratase yes yes 0 0 1 By MS/MS 2 0 1 1 101.8 93.666 4 9.941E-52 120539 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.244 90.927 11457000 11457000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9866 411 8985 83763 67132 67132 1 DYVQEVTK Unmodified 980.48148 0.48147619 4368 Q9H2J4 PDCL3 Phosducin-like protein 3 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 34.176 34.376 2 0.034963 36644 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 52.786 31.015 38147000 0 0 0 0 2340100 0 3388000 0 3543100 4109100 6543100 0 0 5008100 13216000 9867 4368 8986 83764;83765;83766;83767;83768;83769;83770 67133 67133 1 DYVTGGACPSK Unmodified 1153.5074 0.50737336 3398 Q8NBN7 RDH13 Retinol dehydrogenase 13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 23.19 23.154 2 0.021198 24200 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 42.395 25.619 10631000 0 0 0 1278700 2843000 0 2143200 2477300 1888400 0 0 0 0 0 0 9868 3398 8987 83771;83772;83773;83774;83775 67134;67135;67136;67137 67135 4 DYYCILGIEK Unmodified 1272.606 0.60602477 4868 Q9UDY4 DNAJB4 DnaJ homolog subfamily B member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 3 1 1 1 1 1 1 1 1 1 1 1 81.01 79.668 2 0.0029455 92570 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.516 66.323 173110000 6192200 109120000 0 1520200 2478200 0 1878600 3058000 3573500 4027900 6384300 6879800 3340800 6972600 17686000 9869 4868 8988 83776;83777;83778;83779;83780;83781;83782;83783;83784;83785;83786;83787;83788;83789;83790 67138;67139;67140;67141;67142;67143;67144;67145;67146;67147;67148;67149;67150 67141 13 DYYFDSYAHFGIHEEMLK Unmodified 2263.9885 0.98845562 4069 Q99873;Q9NR22 PRMT1;PRMT8 Protein arginine N-methyltransferase 1;Protein arginine N-methyltransferase 8 yes no 0 0 0 By MS/MS 2.5 0.5 1 1 2 88.184 82.325 3;4 1.8685E-05 84831 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 84.874 83.302 66551000 66551000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9870 4069 8989 83791;83792 67151;67152 67151 2 DYYFDSYAHFGIHEEMLK Oxidation (M) 2279.9834 0.98337024 4069 Q99873;Q9NR22 PRMT1;PRMT8 Protein arginine N-methyltransferase 1;Protein arginine N-methyltransferase 8 yes no 0 1 0 By MS/MS 2 0 1 1 85.907 77.777 3 0.00074377 101366 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.784 48.516 63399000 63399000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9871 4069 8989 83793 67153 67153 5573 0 DYYQTLGLAR Unmodified 1198.5982 0.59823728 1191 P25685 DNAJB1 DnaJ homolog subfamily B member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 69.456 69.061 2 9.5079E-06 85496 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.09 103.39 347490000 0 57221000 0 12227000 9994100 13282000 23928000 13978000 14355000 20901000 29272000 24960000 0 26883000 100490000 9872 1191 8990 83794;83795;83796;83797;83798;83799;83800;83801;83802;83803;83804;83805 67154;67155;67156;67157;67158;67159;67160;67161;67162;67163;67164;67165;67166 67158 10 DYYQTLGLARGASDEEIK Unmodified 2027.98 0.97999942 1191 P25685 DNAJB1 DnaJ homolog subfamily B member 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 76.621 71.794 3 5.516E-14 90455 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.401 66.483 273790000 50988000 205250000 17552000 0 0 0 0 0 0 0 0 0 0 0 0 9873 1191 8991 83806;83807;83808;83809 67167;67168;67169;67170 67167 4 DYYTDLSILQK Unmodified 1357.6765 0.67654718 204 O14727 APAF1 Apoptotic protease-activating factor 1 yes yes 0 0 0 By MS/MS 2 0 1 1 84.791 80.047 2 0.0010732 99546 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.051 67.83 57767000 0 57767000 0 0 0 0 0 0 0 0 0 0 0 0 0 9874 204 8992 83810 67171 67171 1 EAAAAAAAAVAAAAAAAAAAEPYPVSGAK Unmodified 2453.2551 0.25505207 2939 Q6P6C2 ALKBH5 RNA demethylase ALKBH5 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 96.646 96.796 3 0.00017223 112621 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 25.818 18.372 2450200 0 0 0 0 0 0 0 0 0 1422000 1028200 0 0 0 0 9875 2939 8993 83811;83812 67172;67173 67172 2 EAAAAEPPRENGLDEAGPGDETTGQEVIVIQDTGFSVK Unmodified 3896.8552 0.85519943 465 O75153 CLUH Clustered mitochondria protein homolog yes yes 0 0 1 By MS/MS 2 0 1 1 87.583 79.453 4 4.2729E-08 103443 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.751 42.255 10569000 10569000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9876 465 8994 83813 67174 67174 1 EAAAALVEEETRR Unmodified 1443.7318 0.73177065 560 O75934 BCAS2 Pre-mRNA-splicing factor SPF27 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 2 1 1 2 1 1 2 2 2 1 1 2 48.163 48.356 2;3 3.7614E-26 53418 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 164.64 77.743 512740000 0 0 0 41532000 10023000 14123000 59193000 9228100 8841900 71265000 74103000 91574000 20522000 14159000 98178000 9877 560 8995 83814;83815;83816;83817;83818;83819;83820;83821;83822;83823;83824;83825;83826;83827;83828;83829;83830;83831 67175;67176;67177;67178;67179;67180;67181;67182;67183;67184;67185 67179 10 EAAALGSRGSCSTEVEK Unmodified 1750.8156 0.81557663 483 O75348 ATP6V1G1 V-type proton ATPase subunit G 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 6 2 2 2 27.09 22.827 2;3 0.00057287 30264 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.39 65.879 78967000 14572000 55073000 9321000 0 0 0 0 0 0 0 0 0 0 0 0 9878 483 8996 83832;83833;83834;83835;83836;83837 67186;67187;67188;67189;67190 67188 4 EAAAQEAGADTPGK Unmodified 1314.6052 0.60517315 664 O95466 FMNL1 Formin-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 13.971 13.805 2 2.6528E-50 13404 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 180.97 161.73 229690000 1934500 0 0 14541000 18893000 17139000 13176000 10533000 9351400 30764000 28654000 21404000 24837000 17635000 20830000 9879 664 8997 83838;83839;83840;83841;83842;83843;83844;83845;83846;83847;83848;83849;83850 67191;67192;67193;67194;67195;67196;67197;67198;67199;67200;67201;67202;67203 67193 12 EAAASEIEAVSVAMEK Oxidation (M) 1649.7818 0.78181689 1238 P28715 ERCC5 DNA repair protein complementing XP-G cells yes yes 0 1 0 By MS/MS 2 0 1 1 68.123 62.224 2 4.4813E-11 79498 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.02 78.138 11446000 0 11446000 0 0 0 0 0 0 0 0 0 0 0 0 0 9880 1238 8998 83851 67204 67204 1833 1 EAAASEIEAVSVAMEK Unmodified 1633.7869 0.78690227 1238 P28715 ERCC5 DNA repair protein complementing XP-G cells yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 82.726 78.716 2 0.00062538 94254 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 84.365 62.969 49596000 0 49596000 0 0 0 0 0 0 0 0 0 0 0 0 0 9881 1238 8998 83852;83853 67205;67206 67206 2 EAAASGLPLMVIIHK Oxidation (M) 1564.8647 0.86469908 704 O95881 TXNDC12 Thioredoxin domain-containing protein 12 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 6.57 3.96 3 4 1 1 1 1 1 1 1 81.609 79.446 3 0.00024233 91214 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.212 56.779 204730000 113490000 31692000 25126000 0 2290900 0 0 0 4717300 3636900 0 0 0 0 23779000 9882 704 8999 83854;83855;83856;83857;83858;83859;83860 67207;67208;67209;67210 67208 847 4 EAAASGLPLMVIIHK Unmodified 1548.8698 0.86978446 704 O95881 TXNDC12 Thioredoxin domain-containing protein 12 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 91.724 86.429 2;3 0.001514 110460 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.963 80.659 27282000 17044000 0 10238000 0 0 0 0 0 0 0 0 0 0 0 0 9883 704 8999 83861;83862 67211;67212 67211 2 EAACESSTPSWASDHNYNAVKPEK Unmodified 2677.1715 0.17145838 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.56 1.83 1 17 1 1 1 1 2 1 2 1 2 2 2 2 47.346 47.307 3;4 2.5579E-17 52217 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.293 77.137 244700000 0 0 10251000 10653000 10858000 13008000 17674000 14673000 16482000 18894000 39830000 0 29306000 26178000 36890000 9884 4139 9000 83863;83864;83865;83866;83867;83868;83869;83870;83871;83872;83873;83874;83875;83876;83877;83878;83879;83880 67213;67214;67215;67216;67217;67218;67219;67220;67221;67222;67223;67224;67225;67226 67216 13 EAADAIDAEGASAPLMELLHSR Oxidation (M) 2282.0849 0.084875202 1010 P14923 JUP Junction plakoglobin yes yes 0 1 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 2 1 2 2 2 1 1 86.236 86.278 3 3.4085E-14 100167 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 76.693 63.266 85519000 0 0 0 3004400 3939800 3666100 0 38055000 10113000 16973000 0 3492700 0 0 6275300 9885 1010 9001 83881;83882;83883;83884;83885;83886;83887;83888;83889;83890;83891;83892 67227;67228;67229;67230;67231;67232 67232 1391 5 EAADGYQR Unmodified 908.39881 0.39880919 1313 P31948 STIP1 Stress-induced-phosphoprotein 1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 8.3727 4.9578 2 0.014568 7224 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.541 74.842 353370000 12141000 341230000 0 0 0 0 0 0 0 0 0 0 0 0 0 9886 1313 9002 83893;83894;83895 67233;67234 67233 2 EAADMLK Oxidation (M) 792.36875 0.36875462 154 O00429 DNM1L Dynamin-1-like protein yes yes 0 1 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 9.0689 9.2029 2 0.035302 7526 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 58.167 38.321 38976000 0 0 0 959360 1758500 3412400 3615500 1697300 1871900 3360800 5945200 6504000 3717200 2559900 3573900 9887 154 9003 83896;83897;83898;83899;83900;83901;83902;83903;83904;83905;83906;83907 67235;67236 67235 2 EAADMLK Unmodified 776.37384 0.37383999 154 O00429 DNM1L Dynamin-1-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.097 23.302 2 0.024641 23238 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.386 55.423 140410000 0 0 0 7195300 5850800 10403000 8145500 7055200 6037900 13419000 14437000 16216000 13276000 14612000 23760000 9888 154 9003 83908;83909;83910;83911;83912;83913;83914;83915;83916;83917;83918;83919 67237 67237 1 EAADPLASK Unmodified 900.45526 0.45526144 1720 P53618 COPB1 Coatomer subunit beta yes yes 0 0 0 By MS/MS 2 0 1 1 25.758 20.535 2 0.030709 29532 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.27 44.31 13116000 13116000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9889 1720 9004 83920 67238 67238 1 EAADRADGAAPGVASR Unmodified 1512.7281 0.72808225 3321 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 18.63 18.861 3 0.0087935 19101 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 27.714 8.8819 32934000 0 0 0 0 2891000 0 4495200 0 4005100 0 4665300 0 4342700 4482900 8052000 9890 3321 9005 83921;83922;83923;83924;83925;83926;83927 67239;67240;67241;67242;67243 67241 5 EAAEAGAEAR Unmodified 973.44649 0.44648767 2381 Q14160 SCRIB Protein scribble homolog yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 6.6378 6.6844 2 0.034153 4621 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 41.876 8.0795 7867400 0 0 0 918940 1253100 1748200 1704100 0 0 932290 0 0 0 0 1310900 9891 2381 9006 83928;83929;83930;83931;83932;83933 67244;67245 67244 2 EAAEALGAAK Unmodified 929.48181 0.48181054 803 P05187 ALPP Alkaline phosphatase, placental type yes yes 0 0 0 By MS/MS 10 0 1 1 19.763 19.52 2 0.035118 19845 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 41.575 15.403 17496000 0 0 0 0 17496000 0 0 0 0 0 0 0 0 0 0 9892 803 9007 83934 67246 67246 1 EAAEAVVEAMDFHGEVTFDTTK Unmodified 2396.0842 0.084206499 2335 Q13630 TSTA3 GDP-L-fucose synthase yes yes 0 0 0 By MS/MS 2.25 0.433 3 1 4 88.83 82.22 3;4 9.6234E-27 86772 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 128.32 124.14 57018000 57018000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9893 2335 9008 83935;83936;83937;83938 67247;67248;67249;67250;67251;67252;67253 67247 7 EAAEAVVEAMDFHGEVTFDTTK Oxidation (M) 2412.0791 0.079121122 2335 Q13630 TSTA3 GDP-L-fucose synthase yes yes 0 1 0 By MS/MS 2 0 1 1 81.743 73.613 3 0.0013239 96207 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.863 39.81 19414000 19414000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9894 2335 9008 83939 67254 67254 3805 1 EAAEIYR Unmodified 850.41848 0.418482 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 14 1 2 2 2 2 2 2 1 21.409 21.644 1;2 0.02229 22402 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 105.2 47.737 5148200000 0 0 0 0 11273000 0 261800000 349680000 270240000 790870000 1448200000 2004800000 11386000 0 0 9895 4226 9009 83940;83941;83942;83943;83944;83945;83946;83947;83948;83949;83950;83951;83952;83953 67255;67256;67257;67258;67259;67260;67261;67262;67263 67256 9 EAAEIYRANCHK Unmodified 1460.683 0.68304632 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 16.478 15.482 3 0.002303 23624 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.819 67.412 241840000 227830000 0 0 0 0 0 0 1839700 0 3792300 8387100 0 0 0 0 9896 4226 9010 83954;83955;83956;83957 67264;67265;67266 67264 3 EAAENSLVAYK Unmodified 1193.5928 0.59281755 1882 P62258 YWHAE 14-3-3 protein epsilon yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.36 3.99 1 8 1 12 3 5 2 1 1 1 1 1 1 1 1 1 1 1 1 43.926 41.683 1;2 3.1904E-15 46825 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 159.37 141.55 4974300000 146030000 2882800000 17304000 65034000 47914000 82834000 67132000 81514000 54210000 144190000 278220000 257750000 86766000 221360000 541180000 9897 1882 9011 83958;83959;83960;83961;83962;83963;83964;83965;83966;83967;83968;83969;83970;83971;83972;83973;83974;83975;83976;83977;83978;83979 67267;67268;67269;67270;67271;67272;67273;67274;67275;67276;67277;67278;67279;67280;67281;67282;67283;67284;67285;67286;67287;67288;67289;67290;67291;67292;67293;67294 67268 25 EAAEPLSEPK Unmodified 1069.5292 0.52915466 2838 Q63HN8 RNF213 E3 ubiquitin-protein ligase RNF213 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 26.801 27.188 2 0.019183 28097 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.96 35.428 11460000 0 0 0 0 0 0 0 0 0 3880600 0 0 0 2976200 4602700 9898 2838 9012 83980;83981;83982 67295 67295 1 EAAEQAERSQSSIVPEEEQAANK Unmodified 2500.1678 0.16775321 3714 Q969G3 SMARCE1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 43.82 38.824 3 2.6111E-121 50412 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 173.78 166.15 47454000 0 47454000 0 0 0 0 0 0 0 0 0 0 0 0 0 9899 3714 9013 83983;83984 67296;67297;67298 67297 3 EAAEQAERSQSSIVPEEEQAANKGEEK Unmodified 2943.3694 0.36936614 3714 Q969G3 SMARCE1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 yes yes 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 42.722 37.455 4 0.013716 51379 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 22.342 20.231 27304000 22194000 0 5110000 0 0 0 0 0 0 0 0 0 0 0 0 9900 3714 9014 83985;83986 67299 67299 1 EAAEQDVEK Unmodified 1017.4615 0.46146903 1203 P26373 RPL13 60S ribosomal protein L13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.34 1 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 15.567 15.784 2 3.9883E-14 5959 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 170.3 56.798 426510000 161340000 0 0 10997000 14946000 13194000 16746000 20274000 25381000 24879000 47045000 29835000 0 31986000 29889000 9901 1203 9015 83987;83988;83989;83990;83991;83992;83993;83994;83995;83996;83997;83998;83999;84000;84001 67300;67301;67302;67303;67304;67305;67306;67307;67308;67309;67310;67311;67312;67313;67314;67315 67310 14 EAAERLSK Unmodified 902.48214 0.48214489 4569 Q9NQG5 RPRD1B Regulation of nuclear pre-mRNA domain-containing protein 1B yes yes 0 0 1 By MS/MS 3 0 1 1 7.7002 4.3418 2 0.039626 6069 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 116.9 17.529 10055000 0 10055000 0 0 0 0 0 0 0 0 0 0 0 0 0 9902 4569 9016 84002 67316 67316 0 EAAEVLQNNR Unmodified 1142.568 0.56799978 1831 P61081 UBE2M NEDD8-conjugating enzyme Ubc12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.196 23.401 2 0.00166 23480 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 125.31 96.153 59234000 0 0 0 2776300 2492800 4432900 4842200 2616700 1892600 7274500 5693200 6972200 5302300 4320500 10617000 9903 1831 9017 84003;84004;84005;84006;84007;84008;84009;84010;84011;84012;84013;84014 67317;67318;67319;67320;67321;67322;67323;67324;67325;67326 67320 10 EAAEVLQNNRR Unmodified 1298.6691 0.66911081 1831 P61081 UBE2M NEDD8-conjugating enzyme Ubc12 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 18.079 18.267 2;3 1.793E-06 17902 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 155.1 114.39 640950000 0 0 0 38637000 32493000 70075000 55453000 37947000 25990000 74978000 57147000 71702000 42795000 46832000 86900000 9904 1831 9018 84015;84016;84017;84018;84019;84020;84021;84022;84023;84024;84025;84026;84027;84028;84029;84030;84031;84032;84033;84034;84035;84036;84037;84038 67327;67328;67329;67330;67331;67332;67333;67334;67335;67336;67337;67338;67339;67340;67341 67335 4 EAAFDDAVEER Unmodified 1250.5415 0.54151026 2169 Q09028 RBBP4 Histone-binding protein RBBP4 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 42.38 42.741 2 0.0033501 46332 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 76.228 60.566 63126000 0 0 0 0 0 0 0 0 0 0 2988700 0 0 60138000 0 9905 2169 9019 84039;84040 67342 67342 1 EAAFDDAVEERVINEEYK Unmodified 2125.9804 0.98039336 2169 Q09028 RBBP4 Histone-binding protein RBBP4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.12 3.89 3 1 4 1 2 1 1 1 1 1 76.594 74.332 3 5.2877E-55 92467 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 149.73 144.28 1243700000 441130000 684470000 71594000 0 0 0 0 0 0 6567000 6751600 8310000 0 0 24868000 9906 2169 9020 84041;84042;84043;84044;84045;84046;84047;84048 67343;67344;67345;67346;67347;67348;67349 67343 7 EAAFSLAEAK Unmodified 1035.5237 0.52367535 5237 Q9Y5K8 ATP6V1D V-type proton ATPase subunit D yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 52.507 52.644 2 0.0058199 60258 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 67.414 51.752 97735000 0 0 0 7585100 5825000 12347000 5226500 8354600 5301500 11366000 10139000 10411000 9278000 0 11899000 9907 5237 9021 84049;84050;84051;84052;84053;84054;84055;84056;84057;84058;84059 67350;67351;67352;67353;67354;67355 67355 6 EAAFSPGQQDWSR Unmodified 1477.6586 0.65860571 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 53.171 53.669 2 4.38E-08 60573 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 104.43 67.369 59562000 0 0 0 0 0 0 0 0 0 0 10636000 14792000 10167000 0 23966000 9908 4285 9022 84060;84061;84062;84063;84064 67356;67357;67358;67359;67360;67361 67358 6 EAAGEGPALYEDPPDQK Unmodified 1785.8057 0.80572345 1222 P27695 APEX1 DNA-(apurinic or apyrimidinic site) lyase;DNA-(apurinic or apyrimidinic site) lyase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.57 3.85 2 2 10 2 2 1 1 1 1 1 1 1 1 1 1 53.694 53.164 2;3 6.7389E-99 101839 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 197.36 178.78 289270000 65104000 30818000 0 4567700 3481600 0 4510300 4346800 3105000 0 28491000 45381000 3973400 17862000 77633000 9909 1222 9023 84065;84066;84067;84068;84069;84070;84071;84072;84073;84074;84075;84076;84077;84078 67362;67363;67364;67365;67366;67367;67368;67369;67370;67371;67372 67369 11 EAAGPAPSPMR Oxidation (M) 1098.5128 0.51279309 2196 Q12834 CDC20 Cell division cycle protein 20 homolog yes yes 0 1 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 15.163 15.325 2 0.004768 14213 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.539 43.666 38122000 0 0 0 3265100 2013000 0 5035000 2544700 1934500 3537700 5475400 0 4619200 4185700 5511800 9910 2196 9024 84079;84080;84081;84082;84083;84084;84085;84086;84087;84088 67373 67373 3564 1 EAAGTTAAAGTGGATEQPPR Unmodified 1812.8602 0.86021864 312 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 1 1 2 2 2 2 2 2 26.894 27.098 2;3 4.3456E-37 28988 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 143.98 134.79 234860000 0 0 0 15358000 14963000 16845000 16699000 9543300 9990600 25889000 23317000 29610000 22433000 25679000 24532000 9911 312 9025 84089;84090;84091;84092;84093;84094;84095;84096;84097;84098;84099;84100;84101;84102;84103;84104;84105;84106;84107;84108;84109;84110 67374;67375;67376;67377;67378;67379;67380;67381;67382;67383;67384;67385;67386;67387;67388 67374 15 EAAHLLNDALAIR Unmodified 1405.7678 0.76776223 4321 Q9H0B6 KLC2 Kinesin light chain 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 73.398 73.589 3 0.022568 84882 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 33.317 19.728 78083000 0 0 0 0 0 10011000 0 6864300 9792400 8149100 8434900 10927000 0 0 23904000 9912 4321 9026 84111;84112;84113;84114;84115;84116;84117 67389;67390;67391 67390 3 EAAIVDPVQPQK Unmodified 1293.6929 0.69286595 2635 Q16775 HAGH Hydroxyacylglutathione hydrolase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 48.669 48.814 2 4.5492E-06 55632 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 128.28 116.79 216780000 0 0 0 10074000 18912000 16409000 15994000 17640000 16082000 19469000 34847000 47422000 0 4647700 15281000 9913 2635 9027 84118;84119;84120;84121;84122;84123;84124;84125;84126;84127;84128;84129 67392;67393;67394;67395;67396;67397;67398;67399;67400;67401;67402;67403;67404;67405;67406;67407 67406 16 EAALAEVADEK Unmodified 1144.5612 0.56118307 2467 Q15003 NCAPH Condensin complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 43.443 42.157 2 1.7067E-09 54247 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 144.65 124.13 627010000 18237000 288500000 1668100 0 15853000 30988000 18939000 17677000 16425000 33374000 36033000 34613000 34042000 30752000 49910000 9914 2467 9028 84130;84131;84132;84133;84134;84135;84136;84137;84138;84139;84140;84141;84142;84143;84144;84145 67408;67409;67410;67411;67412;67413;67414;67415;67416;67417;67418;67419;67420;67421;67422;67423;67424;67425 67414 18 EAALEAAVLNK Unmodified 1127.6186 0.61863837 4762 Q9NZB2 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 59.599 59.621 2 0.00050221 67000 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 83.168 60.125 28248000 0 0 0 3986200 0 0 0 0 0 0 5205000 0 11638000 7419700 0 9915 4762 9029 84146;84147;84148;84149;84150;84151;84152 67426;67427;67428;67429;67430;67431 67430 6 EAALPPVSPLK Unmodified 1120.6492 0.64921022 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.539 66.624 2 4.3531E-05 77158 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 116.3 87.155 229590000 0 0 0 14260000 16982000 12279000 16739000 11852000 11833000 19109000 21813000 41004000 24443000 17894000 21379000 9916 2102 9030 84153;84154;84155;84156;84157;84158;84159;84160;84161;84162;84163;84164 67432;67433;67434;67435;67436;67437;67438;67439;67440;67441;67442;67443;67444 67444 13 EAALSQEQIQILAK Unmodified 1540.8461 0.84607213 222 O14867 BACH1 Transcription regulator protein BACH1 yes yes 0 0 0 By MS/MS 2 0 1 1 78.689 73.953 2 0.020592 92192 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.255 49.884 29275000 0 29275000 0 0 0 0 0 0 0 0 0 0 0 0 0 9917 222 9031 84165 67445 67445 1 EAALSTALSEK Unmodified 1118.5819 0.58191851 757 P02545 LMNA Prelamin-A/C;Lamin-A/C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.89 3.54 1 3 1 14 2 2 1 2 1 1 1 1 1 1 2 1 1 1 1 49.844 49.037 2 2.2881E-06 55622 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 120.45 85.645 2932000000 98935000 1511500000 26093000 147430000 42389000 84466000 69619000 97490000 44181000 106070000 150160000 150320000 85658000 106940000 210780000 9918 757 9032 84166;84167;84168;84169;84170;84171;84172;84173;84174;84175;84176;84177;84178;84179;84180;84181;84182;84183;84184 67446;67447;67448;67449;67450;67451;67452;67453;67454;67455;67456;67457;67458;67459;67460;67461;67462;67463;67464;67465;67466;67467;67468;67469 67455 22 EAALTSEEVGADLEQVEVLQK Unmodified 2257.1325 0.1325369 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 7.12 3.72 2 1 5 1 2 2 1 1 1 86.937 84.999 2;3 8.726E-113 105152 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 189.77 181.06 606340000 16390000 563700000 0 0 0 0 0 0 0 13707000 2520100 3986800 0 0 6036500 9919 2344 9033 84185;84186;84187;84188;84189;84190;84191;84192 67470;67471;67472;67473;67474;67475;67476;67477;67478 67473 9 EAALVQQEEEK Unmodified 1272.6198 0.61976058 2475 Q15020 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 26.151 26.002 2 3.7294E-17 26432 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 179.51 148.09 264430000 0 1919400 0 15590000 26929000 32772000 10690000 6486700 7472500 25581000 25830000 47034000 21353000 17672000 25098000 9920 2475 9034 84193;84194;84195;84196;84197;84198;84199;84200;84201;84202;84203;84204;84205 67479;67480;67481;67482;67483;67484;67485;67486;67487;67488;67489;67490;67491 67481 13 EAALYPHLPPEADPR Unmodified 1674.8366 0.83657007 2303 Q13501 SQSTM1 Sequestosome-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 67.654 67.707 3 0.040793 77403 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 26.49 13.371 112120000 0 0 0 16488000 0 27513000 17426000 0 0 0 22093000 0 0 0 28595000 9921 2303 9035 84206;84207;84208;84209;84210 67492 67492 1 EAAMEAEIK Unmodified 990.4692 0.46919694 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 31.808 31.614 2 0.00090526 40161 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 143.73 74.559 868490000 0 100040000 0 28229000 59191000 45184000 48538000 54278000 47279000 64732000 78169000 121960000 54990000 73613000 92275000 9922 213 9036 84211;84212;84213;84214;84215;84216;84217;84218;84219;84220;84221;84222;84223 67493;67494;67495;67496;67497;67498;67499;67500;67501;67502;67503;67504;67505;67506;67507;67508 67496 15 EAAMEAEIK Oxidation (M) 1006.4641 0.46411156 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.175 15.345 2 1.9419E-05 14898 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 137.9 109.8 716970000 0 0 0 34402000 40357000 32967000 66071000 43219000 40952000 52289000 74531000 112120000 73699000 79083000 67278000 9923 213 9036 84224;84225;84226;84227;84228;84229;84230;84231;84232;84233;84234;84235 67509;67510;67511;67512;67513;67514;67515;67516;67517;67518;67519;67520 67518 283 8 EAAPDAGAEPITADSDPAYSSK Unmodified 2161.9651 0.96513722 3308 Q8N163 CCAR2 Cell cycle and apoptosis regulator protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.32 2.31 1 1 23 2 2 2 2 2 2 2 2 2 2 2 2 1 54.821 54.787 2;3 8.3239E-138 58578 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 185.12 179.74 333090000 36605000 0 0 23024000 20191000 25399000 22330000 21910000 15557000 38039000 31856000 9521300 31644000 28973000 28043000 9924 3308 9037 84236;84237;84238;84239;84240;84241;84242;84243;84244;84245;84246;84247;84248;84249;84250;84251;84252;84253;84254;84255;84256;84257;84258;84259;84260 67521;67522;67523;67524;67525;67526;67527;67528;67529;67530;67531;67532;67533;67534;67535;67536;67537;67538;67539;67540 67534 20 EAAPNEELVQR Unmodified 1254.6204 0.62042929 3408 Q8NCE0 TSEN2 tRNA-splicing endonuclease subunit Sen2 yes yes 0 0 0 By MS/MS 10 0 1 1 34.649 35.376 2 0.0086747 37996 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.579 42.055 4843400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4843400 9925 3408 9038 84261 67541 67541 1 EAAQEAVK Unmodified 844.42905 0.42904669 322;407 O43390;O60506 HNRNPR;SYNCRIP Heterogeneous nuclear ribonucleoprotein R;Heterogeneous nuclear ribonucleoprotein Q no no 0 0 0 By MS/MS By MS/MS 1.4 0.49 3 2 3 2 66.466 67.398 2 0.0062304 100166 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 116.9 45.608 202130000 93143000 108980000 0 0 0 0 0 0 0 0 0 0 0 0 0 9926 322;407 9039 84262;84263;84264;84265;84266 67542;67543;67544;67545 67545 4 EAAQSIEQR Unmodified 1030.5043 0.5043369 3017 Q6ZUT9 DENND5B DENN domain-containing protein 5B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 12.842 12.994 2 0.0033419 12352 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 90.37 52.284 111050000 0 0 0 17079000 8649900 0 11220000 10241000 7483000 15150000 11602000 0 14086000 8888200 6656000 9927 3017 9040 84267;84268;84269;84270;84271;84272;84273;84274;84275;84276 67546;67547;67548;67549;67550 67546 5 EAARWMDEAQALDTADRFINSK Unmodified 2537.1969 0.19688527 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 0 2 By MS/MS 2 0 1 1 90.784 82.654 4 0.010509 107273 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 26.502 18.88 13143000 13143000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9928 4226 9041 84277 67551 67551 1 EAASGTTPQK Unmodified 988.48254 0.48253882 2289 Q13428 TCOF1 Treacle protein yes yes 0 0 0 By MS/MS 1 0 1 1 106.67 111.93 2 0.00082167 92683 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 114.39 57.338 21534000 21534000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9929 2289 9042 84278 67552 67552 1 EAASHVLSK Unmodified 940.49779 0.49779495 1187 P25391 LAMA1 Laminin subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 12.824 10.045 2 0.010715 12892 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 85.731 38.649 24733000 0 15455000 9278200 0 0 0 0 0 0 0 0 0 0 0 0 9930 1187 9043 84279;84280 67553 67553 1 EAASILQELQVETYGSMEK Oxidation (M) 2141.0198 0.019815329 130 O00232 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 0 1 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching 5.67 3.89 4 1 4 3 2 1 1 1 1 89.433 87.504 2;3 8.6287E-53 108877 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 139.86 127.5 289790000 0 257430000 16899000 0 0 0 0 0 0 6306600 3990100 2586900 0 0 2581100 9931 130 9044 84281;84282;84283;84284;84285;84286;84287;84288;84289 67554;67555;67556;67557;67558 67555 174 5 EAASILQELQVETYGSMEK Unmodified 2125.0249 0.024900707 130 O00232 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.38 0.484 5 3 2 4 2 95.224 91.13 2;3 1.4933E-13 114319 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.511 65.888 192030000 20675000 160270000 11083000 0 0 0 0 0 0 0 0 0 0 0 0 9932 130 9044 84290;84291;84292;84293;84294;84295;84296;84297 67559;67560;67561;67562;67563;67564;67565 67561 7 EAASQRPLSSSASNR Unmodified 1559.7652 0.76519604 5004 Q9ULT8 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 11.863 12.009 3 2.006E-05 10195 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.324 68.725 229900000 0 0 0 0 15004000 18280000 16786000 20195000 18874000 24066000 0 34165000 31822000 23718000 26992000 9933 5004 9045 84298;84299;84300;84301;84302;84303;84304;84305;84306;84307 67566;67567;67568;67569;67570;67571;67572;67573;67574;67575 67569 10 EAATAVEQEK Unmodified 1074.5193 0.51931826 693 O95816 BAG2 BAG family molecular chaperone regulator 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.243 12.392 2 1.0736E-05 11616 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 146.69 98.658 267680000 0 0 0 13416000 16619000 18875000 20929000 15312000 12676000 28970000 27228000 30405000 28011000 24909000 30329000 9934 693 9046 84308;84309;84310;84311;84312;84313;84314;84315;84316;84317;84318;84319 67576;67577;67578;67579;67580;67581;67582;67583;67584;67585;67586;67587;67588 67577 13 EAATLEVERPLPMEVEK Unmodified 1939.9925 0.99247837 1674 P51858 HDGF Hepatoma-derived growth factor yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.16 3.28 4 2 19 3 2 1 1 1 1 1 2 1 2 2 2 2 2 2 73.46 72.303 2;3 0 83535 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 282.12 250.48 4994100000 535620000 2995600000 200340000 30067000 33957000 32384000 27097000 45372000 22990000 54349000 238870000 142270000 37425000 129690000 468110000 9935 1674 9047 84320;84321;84322;84323;84324;84325;84326;84327;84328;84329;84330;84331;84332;84333;84334;84335;84336;84337;84338;84339;84340;84341;84342;84343;84344 67589;67590;67591;67592;67593;67594;67595;67596;67597;67598;67599;67600;67601;67602;67603;67604;67605;67606;67607;67608;67609;67610 67601 22 EAATLEVERPLPMEVEK Oxidation (M) 1955.9874 0.98739299 1674 P51858 HDGF Hepatoma-derived growth factor yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.35 5 1 19 1 3 2 2 2 1 2 2 1 1 2 2 2 1 1 63.024 61.654 2;3 4.6612E-93 79472 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 200.76 186.5 2170600000 17119000 1769900000 7957200 40685000 50718000 6146800 38018000 5674400 3608700 8506800 19956000 131650000 34772000 10893000 25031000 9936 1674 9047 84345;84346;84347;84348;84349;84350;84351;84352;84353;84354;84355;84356;84357;84358;84359;84360;84361;84362;84363;84364;84365;84366;84367;84368;84369 67611;67612;67613;67614;67615;67616;67617;67618;67619;67620;67621;67622;67623;67624;67625;67626;67627;67628;67629;67630 67613 2685 19 EAATQAQQTLGSTIDK Unmodified 1660.8268 0.82679325 1528 P47897 QARS Glutamine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 48.28 48.412 2 5.2333E-50 54563 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 204.48 190.06 428260000 0 0 0 21328000 18450000 49841000 24505000 30502000 0 0 0 80764000 44820000 47661000 110390000 9937 1528 9048 84370;84371;84372;84373;84374;84375;84376;84377;84378 67631;67632;67633;67634;67635;67636;67637;67638;67639;67640 67636 10 EAATSELQSIQR Unmodified 1331.6681 0.66810776 255 O15119 TBX3 T-box transcription factor TBX3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 45.473 45.683 2 1.7981E-115 51287 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 215.06 188.68 324900000 0 0 0 21790000 0 21169000 27185000 26075000 24582000 30303000 0 70737000 36748000 29534000 36772000 9938 255 9049 84379;84380;84381;84382;84383;84384;84385;84386;84387;84388 67641;67642;67643;67644;67645;67646;67647;67648;67649;67650;67651;67652;67653;67654;67655;67656;67657;67658 67652 18 EAATSNLK Unmodified 832.42905 0.42904669 1271 P30153 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 7.5309 7.6095 2 0.047391 5790 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 47.849 18.472 13424000 0 0 0 1175500 1421000 2868900 0 2291300 1323700 1920200 0 0 0 0 2423600 9939 1271 9050 84389;84390;84391;84392;84393;84394;84395 67659 67659 1 EAATTGPQVK Unmodified 1000.5189 0.51892433 3167 Q86VM9 ZC3H18 Zinc finger CCCH domain-containing protein 18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.154 12.302 2 0.010192 11613 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 101.72 60.494 114490000 0 0 0 4876400 6466300 5782100 9503100 7504500 8627300 11201000 8666200 13028000 11012000 11266000 16555000 9940 3167 9051 84396;84397;84398;84399;84400;84401;84402;84403;84404;84405;84406;84407 67660;67661;67662;67663;67664;67665;67666;67667;67668;67669 67661 2 EAAVSHAGSMHR Unmodified 1251.5779 0.57785296 5094 Q9Y2A7 NCKAP1 Nck-associated protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 7.3917 7.5027 3 0.00029315 4927 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.492 65.683 62702000 0 0 0 3230100 2205100 4611900 4134700 4317100 2778100 6831600 0 7585000 6972900 8419700 11616000 9941 5094 9052 84408;84409;84410;84411;84412;84413;84414;84415;84416;84417;84418 67670;67671;67672;67673;67674;67675;67676;67677;67678 67672 9 EAAWAISNLTISGRK Unmodified 1615.8682 0.86820455 163;173 O00505;O00629 KPNA3;KPNA4 Importin subunit alpha-4;Importin subunit alpha-3 no no 0 0 1 By MS/MS 10 0 1 1 75.509 75.82 3 0.0024915 86977 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.517 34.969 12836000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12836000 9942 163;173 9053 84419 67679 67679 1 EAAWAITNATSGGSAEQIK Unmodified 1903.9276 0.92756992 1683 P52294 KPNA1 Importin subunit alpha-5;Importin subunit alpha-5, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.38 3.17 4 1 19 3 2 1 1 2 2 1 2 2 2 2 2 1 1 68.627 67.619 2;3 6.3709E-163 85051 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 229.97 213.35 1211200000 0 964860000 18856000 0 4741600 6454800 9440300 7853300 19906000 13379000 48741000 57300000 32844000 11270000 15546000 9943 1683 9054 84420;84421;84422;84423;84424;84425;84426;84427;84428;84429;84430;84431;84432;84433;84434;84435;84436;84437;84438;84439;84440;84441;84442;84443 67680;67681;67682;67683;67684;67685;67686;67687;67688;67689;67690;67691;67692;67693;67694;67695;67696;67697 67685 17 EAAWAITNATSGGTPEQIR Unmodified 1971.965 0.96501806 424 O60684;O15131 KPNA6;KPNA5 Importin subunit alpha-7;Importin subunit alpha-6 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.589 72.658 2 1.341E-177 84117 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 215.51 187.65 200330000 0 0 0 7681700 10976000 15668000 10505000 13398000 6504400 22792000 20663000 22391000 16560000 18673000 34516000 9944 424 9055 84444;84445;84446;84447;84448;84449;84450;84451;84452;84453;84454;84455 67698;67699;67700;67701;67702;67703;67704;67705;67706;67707;67708;67709 67706 12 EAAYHPEVAPDVR Unmodified 1452.6997 0.69974224 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 21 1 2 2 2 2 2 2 2 1 2 2 1 40.559 40.716 2;3 0.00030564 44294 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.865 60.995 420440000 0 0 0 3068300 20984000 64031000 31908000 32518000 26707000 64704000 59080000 10788000 52277000 41447000 12928000 9945 5187 9056 84456;84457;84458;84459;84460;84461;84462;84463;84464;84465;84466;84467;84468;84469;84470;84471;84472;84473;84474;84475;84476 67710;67711;67712;67713;67714;67715;67716;67717;67718;67719;67720 67714 9 EAAYQER Unmodified 865.393 0.39299553 1596 P49756 RBM25 RNA-binding protein 25 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 7.3705 7.4475 2 0.034771 4953 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.134 41.757 77275000 0 0 0 6495600 7547800 9070200 12073000 11225000 18186000 0 0 0 6067100 0 6610200 9946 1596 9057 84477;84478;84479;84480;84481;84482;84483;84484 67721 67721 1 EAAYQERLK Unmodified 1106.572 0.57202253 1596 P49756 RBM25 RNA-binding protein 25 yes yes 0 0 1 By MS/MS 2 0 1 1 24.257 20.129 2 0.0021156 26675 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.62 92.449 10605000 0 10605000 0 0 0 0 0 0 0 0 0 0 0 0 0 9947 1596 9058 84485 67722 67722 1 EACAHLLAITAPK Unmodified 1393.7388 0.73877028 2137 Q07617 SPAG1 Sperm-associated antigen 1 yes yes 0 0 0 By MS/MS 2 0 1 1 72.421 64.183 3 0.033943 85272 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.001 42.88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9948 2137 9059 84486 67723 67723 1 EACFAVEGPK Unmodified 1106.5066 0.50664508 65 CON__P02769 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 42.544 42.715 2 0.0012029 47096 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 108.81 66.915 + 607310000 0 0 0 55349000 123960000 23669000 33451000 27502000 0 88606000 99168000 61882000 38155000 0 55571000 9949 65 9060 84487;84488;84489;84490;84491;84492;84493;84494;84495;84496 67724;67725;67726;67727;67728;67729;67730;67731;67732;67733 67731 10 EACGVIVELIK Unmodified 1229.669 0.66895938 5086 Q9Y265 RUVBL1 RuvB-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.298 82.359 2 0.0010553 94859 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.387 60.625 121350000 0 0 0 2913400 2649800 7767000 3640000 3613900 8134100 10590000 11767000 20269000 8776200 18151000 23081000 9950 5086 9061 84497;84498;84499;84500;84501;84502;84503;84504;84505;84506;84507;84508 67734;67735;67736;67737;67738;67739;67740;67741;67742;67743;67744 67737 11 EACNVESNR Unmodified 1077.4509 0.45092112 4630 Q9NSV4 DIAPH3 Protein diaphanous homolog 3 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 6.7043 6.7925 2 0.02741 4706 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 49.418 32.863 10092000 0 0 0 0 1563500 796160 2592200 2966200 1206400 0 967830 0 0 0 0 9951 4630 9062 84509;84510;84511;84512;84513;84514 67745;67746 67745 2 EACRAYGLK Unmodified 1066.523 0.52296385 973 P12956 XRCC6 X-ray repair cross-complementing protein 6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 21.793 17.962 2 2.4754E-05 25921 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 171.73 124.67 167210000 117150000 23334000 26718000 0 0 0 0 0 0 0 0 0 0 0 0 9952 973 9063 84515;84516;84517 67747;67748;67749 67748 2 EACTVLGEGGDSGGLIPGK Unmodified 1815.8673 0.86727785 4815 Q9P2D3 HEATR5B HEAT repeat-containing protein 5B yes yes 0 0 0 By MS/MS 2 0 1 1 74.75 69.595 2 0.0026128 87554 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 59.248 42.305 45618000 0 45618000 0 0 0 0 0 0 0 0 0 0 0 0 0 9953 4815 9064 84518 67750;67751 67751 2 EACWTISNITAGNR Unmodified 1591.7413 0.74128948 424;1683 P52294;O60684 KPNA1;KPNA6 Importin subunit alpha-5;Importin subunit alpha-5, N-terminally processed;Importin subunit alpha-7 no no 0 0 0 By matching By MS/MS 10 0 2 1 1 73.426 73.683 2 0.0013394 84411 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.198 51.632 14156000 0 0 0 0 0 0 0 0 0 0 0 0 0 5114800 9041300 9954 1683;424 9065 84519;84520 67752 67752 1 EADAALFSELHRK Unmodified 1485.7576 0.75759147 3787 Q96CW5 TUBGCP3 Gamma-tubulin complex component 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 55.895 56.17 3 0.0024537 63410 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 49.627 41.583 50589000 0 0 0 0 0 4714000 0 3353500 3519700 3904500 0 9309800 6964200 6270300 12553000 9955 3787 9066 84521;84522;84523;84524;84525;84526;84527;84528 67753;67754;67755;67756 67754 4 EADAEANHREAGK Unmodified 1396.6331 0.63311924 2467 Q15003 NCAPH Condensin complex subunit 2 yes yes 0 0 1 By matching By MS/MS 2.33 0.471 2 1 1 2 5.5684 2.242 3 1.792E-08 4253 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.892 75.104 164440000 48476000 115960000 0 0 0 0 0 0 0 0 0 0 0 0 0 9956 2467 9067 84529;84530;84531 67757;67758 67757 2 EADASPASAGICR Unmodified 1303.5827 0.58266357 4200 Q9BW27 NUP85 Nuclear pore complex protein Nup85 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 28.312 28.461 2 0.015476 30448 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 40.154 25.391 167850000 0 0 0 10435000 7731500 11074000 16266000 9405900 11017000 22401000 24513000 21158000 16944000 16909000 0 9957 4200 9068 84532;84533;84534;84535;84536;84537;84538;84539;84540;84541;84542 67759 67759 1 EADDIVNWLK Unmodified 1201.5979 0.59790293 838 P07237 P4HB Protein disulfide-isomerase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 83.4 83.463 2 0.0015866 96120 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.551 83.286 262750000 0 0 0 3919500 4322300 5300500 3276900 8193800 6223800 13938000 32999000 31445000 8006700 28472000 116650000 9958 838 9069 84543;84544;84545;84546;84547;84548;84549;84550;84551;84552;84553;84554 67760;67761;67762;67763;67764;67765;67766;67767;67768;67769;67770;67771 67763 11 EADESLNFEEQILEAAK Unmodified 1934.9109 0.91091681 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 3.25 2.59 5 2 1 6 1 1 92.362 89 2;3 9.4046E-131 110044 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 275.35 266.62 1353600000 0 1345200000 8428600 0 0 0 0 0 0 0 0 0 0 0 0 9959 5187 9070 84555;84556;84557;84558;84559;84560;84561;84562 67772;67773;67774;67775;67776;67777;67778;67779 67773 6 EADGEQDEEEK Unmodified 1277.4895 0.48953427 3255 Q8IX12 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes yes 0 0 0 By MS/MS 1 0 1 1 106.25 111.51 2 0.006993 92164 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 77.662 76.591 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9960 3255 9071 84563 67780 67780 1 EADGEQDEEEKDDGEAK Unmodified 1892.7396 0.73955396 3255 Q8IX12 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.36 2.17 2 23 1 1 1 1 2 2 2 2 3 1 2 1 3 3 7.0657 6.9339 3 6.2087E-111 4835 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 193.47 162.9 738690000 11752000 13773000 0 35250000 37077000 27171000 44447000 64778000 36399000 67190000 96146000 62855000 65534000 70319000 106000000 9961 3255 9072 84564;84565;84566;84567;84568;84569;84570;84571;84572;84573;84574;84575;84576;84577;84578;84579;84580;84581;84582;84583;84584;84585;84586;84587;84588 67781;67782;67783;67784;67785;67786;67787;67788;67789;67790;67791;67792;67793;67794;67795 67787 15 EADGILKPLPK Unmodified 1179.6863 0.68632401 1578 P49588 AARS Alanine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 2 1 2 2 1 1 1 2 2 2 2 2 49.799 49.988 2;3 0.0024509 55755 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 63.408 51.542 539240000 0 0 0 18245000 12856000 37447000 26375000 12399000 12632000 21534000 73820000 64021000 33465000 56666000 169780000 9962 1578 9073 84589;84590;84591;84592;84593;84594;84595;84596;84597;84598;84599;84600;84601;84602;84603;84604;84605;84606;84607;84608 67796;67797;67798;67799;67800;67801;67802;67803;67804;67805;67806 67806 10 EADGSETPEPFAAEAK Unmodified 1647.7264 0.7264105 3039 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.644 49.801 2 1.5897E-20 55977 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 132.79 125.06 407780000 0 0 0 32657000 14513000 51748000 21617000 15878000 21059000 30357000 35607000 37834000 30584000 31075000 84848000 9963 3039 9074 84609;84610;84611;84612;84613;84614;84615;84616;84617;84618;84619;84620 67807;67808;67809;67810;67811;67812;67813;67814;67815;67816;67817;67818;67819;67820 67814 14 EADIDGDGQVNYEEFVQMMTAK 2 Oxidation (M) 2521.0625 0.062484779 912 P0DP25;P0DP24;P0DP23 yes no 0 2 0 By matching By matching By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 78.214 78.186 3 1.0062E-20 89955 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.071 86.081 39537000 0 0 0 2268100 5799500 0 0 3190900 0 0 0 8388500 0 0 19890000 9964 912 9075 84621;84622;84623;84624;84625 67821;67822 67821 1175;1176 2 EADKLEQANDDAR Unmodified 1473.6696 0.66956432 3219 Q8IUR0 TRAPPC5 Trafficking protein particle complex subunit 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 1 2 2 1 2 2 2 2 2 2 14.489 14.66 2;3 2.802E-11 14011 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 136.5 108.49 260340000 0 0 0 15325000 21960000 5665200 19376000 21478000 6410400 28311000 27884000 37608000 28002000 24571000 23747000 9965 3219 9076 84626;84627;84628;84629;84630;84631;84632;84633;84634;84635;84636;84637;84638;84639;84640;84641;84642;84643;84644;84645;84646;84647 67823;67824;67825;67826;67827;67828;67829;67830;67831;67832;67833;67834;67835 67831 8 EADLDFAR Unmodified 935.43486 0.43486035 3733 Q96A65 EXOC4 Exocyst complex component 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 45.741 45.975 2 0.013378 51163 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 72.485 55.12 70416000 0 0 0 0 5029600 6729400 6808800 6778800 5431500 0 7291400 11591000 0 8722000 12034000 9966 3733 9077 84648;84649;84650;84651;84652;84653;84654;84655;84656 67836;67837;67838;67839;67840;67841;67842;67843 67839 8 EADLDVATITK Unmodified 1174.6081 0.60813326 1797 P57740 NUP107 Nuclear pore complex protein Nup107 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 57.69 57.809 2 0.035348 65875 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 37.584 14.155 167410000 0 0 0 10624000 8189800 14971000 12444000 9876100 9556900 14502000 17981000 17178000 21501000 11873000 18716000 9967 1797 9078 84657;84658;84659;84660;84661;84662;84663;84664;84665;84666;84667;84668 67844;67845 67844 2 EADLPMTAASHSSAFTPVTAAASPVSLPR Oxidation (M) 2897.4229 0.42292204 5192 Q9Y4B6 VPRBP Protein VPRBP yes yes 0 1 0 By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 80.601 80.75 3 3.271E-26 93104 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.974 66.008 43952000 0 0 0 0 0 0 2808000 0 4093300 11446000 5772800 0 2599400 5225600 12007000 9968 5192 9079 84669;84670;84671;84672;84673;84674;84675 67846;67847;67848 67847 6589 3 EADLSMFDLIGLENK Unmodified 1693.8233 0.82328777 3915 Q96L91 EP400 E1A-binding protein p400 yes yes 0 0 0 By MS/MS 2 0 1 1 98.446 90.316 2 0.036681 116531 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.473 52.886 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9969 3915 9080 84676 67849 67849 1 EADLVFISVNTPTK Unmodified 1532.8086 0.80862399 425 O60701 UGDH UDP-glucose 6-dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 85.658 81.013 2 9.1455E-48 97775 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 223.14 194.94 103410000 55776000 42902000 4733700 0 0 0 0 0 0 0 0 0 0 0 0 9970 425 9081 84677;84678;84679;84680 67850;67851;67852;67853;67854 67852 5 EADPEDGKPVMDK Unmodified 1429.6395 0.63950975 1113 P20810 CAST Calpastatin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 4 2 24 1 5 2 2 2 2 2 2 2 2 2 2 2 2 21.105 20.467 2;3 0.00024568 20594 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 67.234 64.087 888200000 54746000 70387000 0 29712000 27284000 35603000 35335000 39591000 28959000 54360000 97479000 128130000 52799000 81954000 151870000 9971 1113 9082 84681;84682;84683;84684;84685;84686;84687;84688;84689;84690;84691;84692;84693;84694;84695;84696;84697;84698;84699;84700;84701;84702;84703;84704;84705;84706;84707;84708;84709;84710 67855;67856;67857;67858;67859;67860;67861;67862;67863;67864;67865;67866;67867;67868;67869;67870;67871;67872 67868 16 EADPEDGKPVMDK Oxidation (M) 1445.6344 0.63442437 1113 P20810 CAST Calpastatin yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching 7.81 3.47 4 2 15 1 4 1 1 2 1 1 1 2 1 1 1 1 2 1 11.739 10.894 2;3 0.0010807 10409 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 55.196 48.777 560370000 57416000 411300000 1938000 1381800 9534100 2142300 2593000 2182500 12587000 1906900 14284000 6969100 4593800 24887000 6652600 9972 1113 9082 84711;84712;84713;84714;84715;84716;84717;84718;84719;84720;84721;84722;84723;84724;84725;84726;84727;84728;84729;84730;84731 67873;67874;67875;67876;67877;67878;67879 67879 1599 3 EADPESEADR Unmodified 1117.4524 0.4523609 158 O00461 GOLIM4 Golgi integral membrane protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.406 11.526 2 0.010197 10068 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 56.432 47.569 29481000 0 0 0 1590100 1367900 2447000 2780800 2270200 2434900 2321800 0 2893300 4279400 3384400 3710700 9973 158 9083 84732;84733;84734;84735;84736;84737;84738;84739;84740;84741;84742 67880;67881;67882;67883;67884;67885;67886;67887 67886 8 EADVDQDGRVNYEEFAR Unmodified 2011.8872 0.88716167 4781 Q9NZT1 CALML5 Calmodulin-like protein 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 57.307 57.237 3 0.00064101 65162 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 52.453 43.289 76570000 0 0 0 42822000 10137000 6670500 0 5950200 0 5317300 5673200 0 0 0 0 9974 4781 9084 84743;84744;84745;84746;84747;84748 67888;67889;67890;67891;67892 67888 5 EAEAAFLNVYK Unmodified 1253.6292 0.62920306 1406;2357 P39880;Q13948 CUX1 Homeobox protein cut-like 1;Protein CASP no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 72.838 72.627 2 2.3843E-05 82746 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 121.96 79.847 178060000 0 2922800 0 10053000 10659000 12176000 10714000 11879000 10836000 17958000 19803000 17069000 16507000 13839000 23644000 9975 1406;2357 9085 84749;84750;84751;84752;84753;84754;84755;84756;84757;84758;84759;84760;84761 67893;67894;67895;67896;67897;67898;67899;67900;67901;67902;67903;67904;67905;67906 67902 14 EAEALETETK Unmodified 1119.5295 0.52954859 3156 Q86UU1 PHLDB1 Pleckstrin homology-like domain family B member 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.813 20.016 2 0.0055612 20686 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 68.456 32.27 41763000 0 0 0 2437500 3279900 2546000 3261300 3055900 3269500 2930900 3468300 5007400 3481100 4848900 4176700 9976 3156 9086 84762;84763;84764;84765;84766;84767;84768;84769;84770;84771;84772;84773 67907;67908;67909 67907 3 EAEAMALLAEAERK Oxidation (M) 1546.7661 0.76610724 1750 P54920 NAPA Alpha-soluble NSF attachment protein yes yes 0 1 1 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 71.014 66.931 3 0.0034774 81503 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 48.704 37.599 28641000 0 8707500 19933000 0 0 0 0 0 0 0 0 0 0 0 0 9977 1750 9087 84774;84775 67910;67911 67910 2847 0 EAEAMALLAEAERK Unmodified 1530.7712 0.77119262 1750 P54920 NAPA Alpha-soluble NSF attachment protein yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching 7.44 3.62 2 1 6 2 1 1 1 1 1 1 1 79.089 77.974 3 0.0016666 89421 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 44.511 24.771 100850000 0 59917000 15306000 0 1362600 0 0 3035900 0 3972900 0 3648300 3525500 0 10084000 9978 1750 9087 84776;84777;84778;84779;84780;84781;84782;84783;84784 67912;67913;67914 67913 2 EAECVEADSGR Unmodified 1221.4932 0.49317986 81 CON__Q6NT21;CON__P78385;P78385 KRT83 Keratin, type II cuticular Hb3 no no 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 12.721 12.67 2 0.0036946 11672 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 63.283 56.665 + 6857700 0 0 0 1094400 596280 0 0 5167000 0 0 0 0 0 0 0 9979 81 9088 84785;84786;84787 67915 67915 1 EAEDELSAR Unmodified 1018.4567 0.456718 1379 P36776 LONP1 Lon protease homolog, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 19.074 19.381 2 0.0037238 19490 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 101.43 68.821 42152000 0 0 0 0 0 0 3193600 2608100 2853700 5881500 6052700 4830200 4738300 3920400 8073300 9980 1379 9089 84788;84789;84790;84791;84792;84793;84794;84795;84796 67916;67917;67918 67917 3 EAEDGFRK Unmodified 950.44576 0.44575938 5030 Q9UNF0 PACSIN2 Protein kinase C and casein kinase substrate in neurons protein 2 no no 0 0 1 By MS/MS 2.5 0.5 1 1 2 10.186 6.8674 2 0.016036 9229 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 108.09 71.067 62470000 0 62470000 0 0 0 0 0 0 0 0 0 0 0 0 0 9981 5030 9090 84797;84798 67919 67919 0 EAEDGIIAYDDCGVK Unmodified 1653.7192 0.71921663 517 O75534 CSDE1 Cold shock domain-containing protein E1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.71 3.63 1 2 1 10 2 2 1 1 1 1 1 1 1 1 1 1 64.383 63.128 2 2.9207E-15 74285 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.61 94.366 424860000 28039000 169450000 0 7443300 11789000 13992000 14190000 20425000 13146000 21241000 33788000 34784000 0 0 56569000 9982 517 9091 84799;84800;84801;84802;84803;84804;84805;84806;84807;84808;84809;84810;84811;84812 67920;67921;67922;67923;67924;67925;67926;67927;67928;67929;67930;67931 67922 9 EAEDMVQK Oxidation (M) 964.41716 0.41716137 5278 Q9Y6D9 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes yes 0 1 0 By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 6.3632 6.5113 2 0.013057 4528 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 63.306 38.308 11557000 0 0 0 0 828750 622220 926040 958180 905670 1226800 1472000 0 1367900 1307500 1941700 9983 5278 9092 84813;84814;84815;84816;84817;84818;84819;84820;84821;84822 67932;67933;67934 67933 6681 3 EAEDMVQK Unmodified 948.42225 0.42224675 5278 Q9Y6D9 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By matching 10 0 6 1 1 1 1 1 1 13.79 13.958 2 0.012727 13583 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 73.975 31.06 19608000 0 0 0 0 3103100 0 0 2764200 2007400 0 0 2939500 4597000 4196400 0 9984 5278 9092 84823;84824;84825;84826;84827;84828 67935;67936;67937 67936 3 EAEDNIREMLMAR Unmodified 1576.7338 0.73376126 446 O60925 PFDN1 Prefoldin subunit 1 yes yes 0 0 1 By MS/MS 10 0 1 1 73.674 74.014 3 0.02404 84855 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.457 35.858 6269800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6269800 9985 446 9093 84829 67938 67938 0 EAEDTQVFGDLPRPR Unmodified 1728.8431 0.84311201 3750 Q96B36 AKT1S1 Proline-rich AKT1 substrate 1 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 68.092 68.165 3 0.0055064 78083 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 38.995 31.587 52359000 0 0 0 0 0 23278000 0 29081000 0 0 0 0 0 0 0 9986 3750 9094 84830;84831 67939;67940 67940 2 EAEEEYRNSMPASSFQQQK Unmodified 2257.991 0.99097482 4557 Q9NQ29 LUC7L Putative RNA-binding protein Luc7-like 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 45.361 45.531 3 1.0711E-16 57782 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.221 70.717 124530000 0 0 0 5588000 7040300 7282100 8075100 8192300 6110000 12920000 15070000 15845000 10543000 8853000 19005000 9987 4557 9095 84832;84833;84834;84835;84836;84837;84838;84839;84840;84841;84842;84843;84844 67941;67942;67943;67944;67945;67946;67947;67948;67949;67950;67951;67952;67953;67954;67955;67956;67957 67944 17 EAEEEYRNSMPASSFQQQK Oxidation (M) 2273.9859 0.98588944 4557 Q9NQ29 LUC7L Putative RNA-binding protein Luc7-like 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 34.025 34.221 3 4.0513E-05 37035 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 59.286 56.404 30276000 0 0 0 0 5601600 0 0 0 0 5883400 0 11554000 7236900 0 0 9988 4557 9095 84845;84846;84847;84848;84849 67958;67959;67960;67961;67962 67961 5970 5 EAEEGCPEK Unmodified 1047.4179 0.41788965 360 O43719 HTATSF1 HIV Tat-specific factor 1 yes yes 0 0 0 By MS/MS By MS/MS 1 0 2 1 1 106.7 111.97 2 0.0072799 92724 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 101.72 77.567 33806000 33806000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9989 360 9096 84850;84851 67963;67964 67963 2 EAEEGPTGASESQDSPRK Unmodified 1873.829 0.82897809 2795 Q5TCZ1 SH3PXD2A SH3 and PX domain-containing protein 2A yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By matching 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 13.322 13.208 3 1.1156E-05 11907 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 61.096 57.192 103460000 0 4699800 0 5335000 7362900 7087600 8470400 6494900 3484700 7991400 11677000 11348000 12327000 6548300 10632000 9990 2795 9097 84852;84853;84854;84855;84856;84857;84858;84859;84860;84861;84862;84863;84864 67965;67966;67967;67968;67969 67967 4 EAEELARNMAIQQELEK Unmodified 2000.9837 0.98370459 676 O95630 STAMBP STAM-binding protein yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 71.171 67.889 3 0.00038196 86535 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.476 54.896 4688900 0 0 4688900 0 0 0 0 0 0 0 0 0 0 0 0 9991 676 9098 84865;84866 67970;67971 67970 2 EAEELARNMAIQQELEK Oxidation (M) 2016.9786 0.97861922 676 O95630 STAMBP STAM-binding protein yes yes 0 1 1 By MS/MS 2 0 1 1 59.655 55.871 3 0.0051217 69596 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 43.861 34.112 6040600 0 0 6040600 0 0 0 0 0 0 0 0 0 0 0 0 9992 676 9098 84867 67972 67972 818 1 EAEEMCSK Unmodified 982.37358 0.373582 4226;2895 Q6N069;Q9BXJ9 NAA16;NAA15 N-alpha-acetyltransferase 16, NatA auxiliary subunit;N-alpha-acetyltransferase 15, NatA auxiliary subunit no no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 6.6524 6.8164 2 0.0068017 4787 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 96.253 87.52 17554000 0 0 0 0 0 0 2600500 3890600 0 1150100 4324700 5588400 0 0 0 9993 2895;4226 9099 84868;84869;84870;84871;84872 67973;67974;67975;67976 67976 4 EAEEPGPDSENSQENPPLR Unmodified 2093.9138 0.91377035 3590 Q8WXG6 MADD MAP kinase-activating death domain protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 2 2 2 1 1 1 1 1 2 1 39.424 39.638 2;3 1.7967E-41 43731 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 143.98 138.49 91380000 0 0 0 0 4273500 10768000 7334900 16074000 3282400 5422900 7813300 8340100 5753100 13327000 8990200 9994 3590 9100 84873;84874;84875;84876;84877;84878;84879;84880;84881;84882;84883;84884;84885;84886;84887 67977;67978;67979;67980;67981;67982;67983;67984;67985;67986;67987;67988 67987 12 EAEESLQQQQQEQEEALK Unmodified 2143.9869 0.9869353 2689 Q4V328 GRIPAP1 GRIP1-associated protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 43.617 43.874 3 0.019135 48194 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 42.059 32.271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9995 2689 9101 84888 67989 67989 1 EAEEVYR Unmodified 894.40831 0.40831125 5141 Q9Y383 LUC7L2 Putative RNA-binding protein Luc7-like 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.112 15.283 2 0.028147 13916 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 76.847 43.489 117750000 0 0 0 7801800 8211600 6516300 7132500 5564000 5956500 10939000 13958000 14576000 13835000 13215000 10049000 9996 5141 9102 84889;84890;84891;84892;84893;84894;84895;84896;84897;84898;84899;84900 67990;67991;67992;67993;67994;67995;67996;67997 67994 8 EAEGAPQVEAGK Unmodified 1184.5673 0.56733108 2117 Q05682 CALD1 Caldesmon yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 20.311 20.078 2 7.7311E-05 20544 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 89.171 64.968 231980000 12051000 0 0 10099000 12368000 10402000 14236000 11594000 10193000 25967000 31568000 36935000 20784000 0 35783000 9997 2117 9103 84901;84902;84903;84904;84905;84906;84907;84908;84909;84910;84911;84912 67998;67999;68000;68001;68002;68003;68004 68002 7 EAEGEQFVEEALEK Unmodified 1606.7362 0.7362469 224 O14879 IFIT3 Interferon-induced protein with tetratricopeptide repeats 3 yes yes 0 0 0 By MS/MS By MS/MS 2.4 0.49 3 2 1 4 82.787 77.953 2;3 0.0036346 97685 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 38.661 30.676 84019000 12121000 71898000 0 0 0 0 0 0 0 0 0 0 0 0 0 9998 224 9104 84913;84914;84915;84916;84917 68005;68006;68007;68008 68005 3 EAEGGAATAGPSR Unmodified 1172.5422 0.54217896 4805 Q9P253 VPS18 Vacuolar protein sorting-associated protein 18 homolog yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 9.2603 9.4316 2 0.002909 7894 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 56.359 29.397 16431000 0 0 0 0 0 2434600 1690200 0 804880 1476600 0 3258300 1790400 1742100 3233300 9999 4805 9105 84918;84919;84920;84921;84922;84923;84924;84925;84926 68009;68010;68011;68012;68013;68014 68012 6 EAEGGAATAGPSREQLK Unmodified 1670.8224 0.82237657 4805 Q9P253 VPS18 Vacuolar protein sorting-associated protein 18 homolog yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 25.496 21.327 3 0.00027629 28204 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.463 55.079 28185000 0 28185000 0 0 0 0 0 0 0 0 0 0 0 0 0 10000 4805 9106 84927;84928 68015;68016 68015 2 EAEGSLTEASLPEAQVASGAGAGAPR Unmodified 2425.1721 0.1721103 3321 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 71.891 72.003 3 1.543E-09 82399 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.398 42.115 58114000 0 0 0 3418800 0 7963300 5140400 3951300 3272700 7859500 5914100 6419500 4576800 3326500 6271500 10001 3321 9107 84929;84930;84931;84932;84933;84934;84935;84936;84937;84938;84939 68017;68018;68019;68020;68021;68022;68023;68024;68025;68026;68027 68020 11 EAEGSSAEYK Unmodified 1069.4564 0.45638365 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 7.5 3.83 1 2 7 2 1 1 1 1 1 1 1 1 17.523 17.473 2 0.00091496 92825 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 113.62 98.04 119100000 84721000 24464000 0 0 0 1317500 885050 1113400 1683700 0 0 1011500 0 1100800 2799900 10002 1564 9108 84940;84941;84942;84943;84944;84945;84946;84947;84948;84949 68028;68029;68030;68031 68030 4 EAEGSSAEYKK Unmodified 1197.5513 0.55134667 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 6.6923 3.3477 2;3 8.6411E-16 5335 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 183.72 142.3 816590000 30269000 786320000 0 0 0 0 0 0 0 0 0 0 0 0 0 10003 1564 9109 84950;84951;84952 68032;68033;68034 68032 3 EAELDVNEELDK Unmodified 1402.6464 0.64636926 1471 P43034 PAFAH1B1 Platelet-activating factor acetylhydrolase IB subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.2 3.92 3 2 1 1 1 1 1 58.155 52.186 2 1.0234E-36 67419 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 195.36 140.25 89309000 35683000 51742000 1884500 0 0 0 0 0 0 0 0 0 0 0 0 10004 1471 9110 84953;84954;84955;84956;84957 68035;68036;68037;68038;68039;68040;68041 68036 7 EAELENSGLALYDGK Unmodified 1607.7679 0.76788138 2912 Q6NZY4 ZCCHC8 Zinc finger CCHC domain-containing protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 69.52 69.155 2 0.00017854 79486 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 70.195 51.755 95459000 0 53166000 0 2335600 1985500 4306500 3626700 2114200 0 3911900 4812200 3785600 3121500 3602600 8690700 10005 2912 9111 84958;84959;84960;84961;84962;84963;84964;84965;84966;84967;84968;84969 68042;68043;68044;68045;68046;68047;68048;68049;68050;68051 68043 10 EAELHLTYLK Unmodified 1215.6499 0.6499385 3414 Q8ND24 RNF214 RING finger protein 214 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 2 1 1 1 1 2 2 1 2 1 1 2 61.656 61.743 2;3 0.0059423 69537 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.879 45.625 157690000 0 0 0 9658900 14266000 3952100 2428600 10911000 10217000 15370000 14749000 16452000 10668000 12092000 36930000 10006 3414 9112 84970;84971;84972;84973;84974;84975;84976;84977;84978;84979;84980;84981;84982;84983;84984;84985;84986 68052;68053;68054;68055;68056;68057 68053 6 EAELLEPLMPAIR Oxidation (M) 1496.7909 0.79086543 1720 P53618 COPB1 Coatomer subunit beta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.994 82.055 2 1.4324E-25 95091 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 161.27 146.59 162540000 0 0 0 6443600 7765100 16719000 9224400 9539400 6506900 20343000 16069000 20573000 10443000 12919000 25991000 10007 1720 9113 84987;84988;84989;84990;84991;84992;84993;84994;84995;84996;84997;84998 68058;68059;68060;68061;68062;68063;68064;68065;68066;68067;68068;68069;68070;68071 68068 2790 14 EAELLEPLMPAIR Unmodified 1480.796 0.79595081 1720 P53618 COPB1 Coatomer subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 89.559 89.694 2 0.00027222 103771 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.249 91.224 18857000 0 0 0 0 0 1765300 0 1636200 0 2587800 2132900 0 0 2193300 8541300 10008 1720 9113 84999;85000;85001;85002;85003;85004 68072;68073;68074;68075 68074 3 EAELLTSAEK Unmodified 1089.5554 0.55536941 413 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 38.719 38.249 2 0.0098969 40964 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 80.787 46.784 5880300 0 0 0 0 5880300 0 0 0 0 0 0 0 0 0 0 10009 413 9114 85005;85006;85007 68076;68077;68078 68077 3 EAELPLLDLMK Oxidation (M) 1286.6792 0.67918972 3915 Q96L91 EP400 E1A-binding protein p400 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 85.423 85.509 2 0.0032154 99178 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.398 55.196 48932000 0 0 0 3179100 0 0 4970500 7671400 0 7992000 5448100 8287900 5125900 0 6256900 10010 3915 9115 85008;85009;85010;85011;85012;85013;85014;85015 68079;68080;68081;68082;68083;68084 68084 5413 5 EAELPLLDLMK Unmodified 1270.6843 0.6842751 3915 Q96L91 EP400 E1A-binding protein p400 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.86 3.4 1 1 5 2 1 1 1 1 1 95.861 94.822 2 0.00045973 116245 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.73 87.48 54957000 0 48869000 0 0 0 0 0 1182000 0 1066300 719700 0 0 957250 2163000 10011 3915 9115 85016;85017;85018;85019;85020;85021;85022 68085;68086;68087;68088 68085 4 EAELQCTQLDLER Unmodified 1603.7512 0.75118546 646 O95361 TRIM16 Tripartite motif-containing protein 16 yes yes 0 0 0 By MS/MS 10 0 1 1 33.571 33.703 3 0.018381 36706 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 27.409 0.073851 13755000 0 0 0 0 0 0 0 0 13755000 0 0 0 0 0 0 10012 646 9116 85023 68089 68089 1 EAELQCTQLDLERK Unmodified 1731.8461 0.84614848 646 O95361 TRIM16 Tripartite motif-containing protein 16 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 58.176 53.341 3 0.00048439 65919 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 84.173 74.89 44002000 0 35672000 8330100 0 0 0 0 0 0 0 0 0 0 0 0 10013 646 9117 85024;85025;85026 68090;68091;68092 68091 3 EAELRLVK Unmodified 956.56548 0.56548059 2838 Q63HN8 RNF213 E3 ubiquitin-protein ligase RNF213 yes yes 0 0 1 By MS/MS 2 0 1 1 41.147 37.538 2 0.040023 47349 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 143.89 62.103 11251000 0 0 11251000 0 0 0 0 0 0 0 0 0 0 0 0 10014 2838 9118 85027 68093 68093 0 EAEMEEHREHIK Oxidation (M) 1552.694 0.69400493 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.67 2.98 3 15 1 1 1 1 1 1 1 2 1 2 1 1 1 1 2 6.1796 5.7963 3 2.4487E-05 3713 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 89.43 84.45 1423600000 71983000 9683200 34775000 62296000 52115000 68044000 81991000 72574000 89054000 130080000 134110000 219500000 132760000 121550000 143110000 10015 2102 9119 85028;85029;85030;85031;85032;85033;85034;85035;85036;85037;85038;85039;85040;85041;85042;85043;85044;85045 68094;68095;68096;68097;68098;68099;68100;68101;68102 68094 3401 8 EAEMEEHREHIK Unmodified 1536.6991 0.69909031 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.43 2.06 2 26 1 1 2 2 2 1 2 3 2 1 2 4 2 3 10.038 9.9449 2;3;4 8.2455E-07 7826 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 114.4 94.098 1184900000 83759000 0 3604200 35271000 20922000 67835000 24054000 61487000 51814000 64263000 178690000 153320000 126260000 88698000 224930000 10016 2102 9119 85046;85047;85048;85049;85050;85051;85052;85053;85054;85055;85056;85057;85058;85059;85060;85061;85062;85063;85064;85065;85066;85067;85068;85069;85070;85071;85072;85073 68103;68104;68105;68106;68107;68108;68109;68110;68111;68112;68113;68114;68115 68112 3 EAENPEGEEK Unmodified 1130.4728 0.472762 1674 P51858 HDGF Hepatoma-derived growth factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.79 1 3 1 10 2 2 1 1 1 1 1 1 1 1 1 1 1 15.506 15.008 2 2.2316E-24 5304 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 177.7 168.79 1340400000 913780000 107240000 12205000 18109000 0 0 17431000 31545000 0 0 85789000 26306000 0 41022000 87012000 10017 1674 9120 85074;85075;85076;85077;85078;85079;85080;85081;85082;85083;85084;85085;85086;85087;85088 68116;68117;68118;68119;68120;68121;68122;68123;68124;68125;68126;68127;68128;68129;68130;68131;68132;68133 68127 18 EAENPREVLDQVCYR Unmodified 1876.8738 0.87376021 2539 Q15459 SF3A1 Splicing factor 3A subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 66.712 66.939 3 1.3148E-35 76705 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 127.71 117.17 190190000 0 0 0 0 0 17164000 0 17386000 11655000 18750000 17608000 25675000 16955000 20411000 44583000 10018 2539 9121 85089;85090;85091;85092;85093;85094;85095;85096;85097 68134;68135;68136;68137;68138;68139;68140;68141;68142;68143 68134 7 EAEPDLLAVLR Unmodified 1224.6714 0.67140222 4833 Q9UBB6 NCDN Neurochondrin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 87.512 87.62 2 0.0064867 101603 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 56.432 26.265 27939000 0 0 0 0 1617000 4412400 1432800 1941200 1572300 3966700 2381100 1757500 2041400 1908000 4908500 10019 4833 9122 85098;85099;85100;85101;85102;85103;85104;85105;85106;85107;85108 68144;68145;68146;68147;68148;68149;68150 68145 7 EAEPDLLAVLRGLSEDFQK Unmodified 2129.1004 0.10044891 4833 Q9UBB6 NCDN Neurochondrin yes yes 0 0 1 By MS/MS 2 0 1 1 101.91 93.78 3 0.00016503 120691 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.938 57.55 4232400 4232400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10020 4833 9123 85109 68151 68151 1 EAEPIPETVKPEEK Unmodified 1594.809 0.80901792 521 O75586 MED6 Mediator of RNA polymerase II transcription subunit 6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 41.766 41.118 3 0.00090101 45285 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.214 42.499 216550000 0 50742000 0 8886300 10126000 13424000 11088000 9947400 10903000 14086000 20078000 17965000 18626000 0 30681000 10021 521 9124 85110;85111;85112;85113;85114;85115;85116;85117;85118;85119;85120;85121;85122 68152;68153;68154;68155;68156;68157;68158;68159;68160;68161;68162;68163;68164;68165 68162 13 EAEPYYLLLPR Unmodified 1362.7184 0.71835242 4354 Q9H1Y0 ATG5 Autophagy protein 5 yes yes 0 0 0 By MS/MS 10 0 1 1 86.607 86.765 2 0.012787 100203 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.198 37.417 7827200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7827200 10022 4354 9125 85123 68166 68166 1 EAEQAASEAAGGDTTPGSSPSSLYYEEPLGQPPR Unmodified 3448.5543 0.55426638 3134 Q86TC9 MYPN Myopalladin yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.512 76.561 3 1.7657E-39 88083 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.068 65.802 84586000 0 0 0 2773500 6019800 6252700 0 6230700 6261500 9333700 9306100 11627000 6490200 6798800 13492000 10023 3134 9126 85124;85125;85126;85127;85128;85129;85130;85131;85132;85133;85134 68167;68168;68169;68170;68171;68172;68173;68174;68175;68176;68177 68170 11 EAEQILATAVYQAK Unmodified 1533.8039 0.80387296 4555 Q9NPJ6 MED4 Mediator of RNA polymerase II transcription subunit 4 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 74.192 74.242 2 0.00034307 85707 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 98.156 63.95 53832000 0 0 0 2000100 2743600 3234300 4001900 0 4872700 4188400 6346700 6670100 4966100 4519000 10289000 10024 4555 9127 85135;85136;85137;85138;85139;85140;85141;85142;85143;85144;85145 68178;68179;68180;68181;68182;68183;68184 68182 7 EAEQMGNELER Unmodified 1304.5667 0.56667916 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 31.649 31.822 2 2.0005E-05 33502 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 130.66 98.301 55991000 0 0 0 5930700 3227600 5266800 4455800 0 2787500 6244400 9494700 6436900 0 4918600 7227500 10025 2459 9128 85146;85147;85148;85149;85150;85151;85152;85153;85154;85155;85156 68185;68186;68187;68188;68189;68190;68191;68192;68193;68194;68195;68196 68188 12 EAEQMGNELER Oxidation (M) 1320.5616 0.56159378 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 16.381 16.549 2 0.0024521 16209 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 63.216 49.009 17897000 0 0 0 1634800 1683900 0 1820000 1869400 1559500 0 1788600 3916000 1684800 1940400 0 10026 2459 9128 85157;85158;85159;85160;85161;85162;85163;85164;85165 68197;68198 68197 4049 2 EAEQVLQK Unmodified 943.49746 0.4974606 3556 Q8WV22 NSMCE1 Non-structural maintenance of chromosomes element 1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 17.766 17.947 2 0.0061841 18285 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 103.02 27.749 44936000 0 0 0 3008600 2584400 4454200 4977600 0 2739000 5266900 4575500 6339900 0 4290200 6699600 10027 3556 9129 85166;85167;85168;85169;85170;85171;85172;85173;85174;85175;85176 68199;68200;68201;68202;68203;68204;68205;68206;68207;68208 68201 10 EAERDMLPSPEQTLSPLSK Oxidation (M) 2143.0467 0.046698781 2708 Q53SF7 COBLL1 Cordon-bleu protein-like 1 yes yes 0 1 1 By MS/MS By MS/MS 6.5 3.5 1 1 1 1 72.644 70.796 3 0.00045636 81267 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 44.788 40.35 8779300 0 2840300 0 0 0 5939000 0 0 0 0 0 0 0 0 0 10028 2708 9130 85177;85178 68209;68210 68209 4363 2 EAERDVSLTSLAK Unmodified 1417.7413 0.7412727 1794 P57678 GEMIN4 Gem-associated protein 4 yes yes 0 0 1 By matching By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 56.07 50.371 3 0.013395 62087 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 43.761 37.613 139930000 6246500 125930000 7753500 0 0 0 0 0 0 0 0 0 0 0 0 10029 1794 9131 85179;85180;85181;85182 68211;68212 68212 1 EAEREGATEEAVRER Unmodified 1730.8184 0.81835383 4172 Q9BV20 MRI1 Methylthioribose-1-phosphate isomerase yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 14.715 14.883 3 0.0017357 13887 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 69.431 41.75 145710000 0 0 0 4772600 2778100 8061500 4487100 0 0 7774100 21121000 16936000 6947500 12564000 60267000 10030 4172 9132 85183;85184;85185;85186;85187;85188;85189;85190;85191;85192 68213;68214;68215;68216 68214 4 EAERLAHEDAECEK Unmodified 1685.7315 0.73151265 4879 Q9UG63 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13.131 12.594 3 1.5458E-100 11376 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 189.07 180.89 467300000 33818000 27516000 140400000 14223000 18880000 19759000 23868000 19421000 17631000 22453000 20864000 36577000 27792000 17080000 27025000 10031 4879 9133 85193;85194;85195;85196;85197;85198;85199;85200;85201;85202;85203;85204;85205;85206;85207 68217;68218;68219;68220;68221;68222;68223;68224;68225;68226;68227;68228;68229;68230;68231;68232;68233;68234;68235;68236;68237 68235 20 EAERLQMDNELLRQQIEELK Unmodified 2484.2642 0.26423655 2590 Q15853 USF2 Upstream stimulatory factor 2 yes yes 0 0 2 By MS/MS 2 0 1 1 86.546 78.416 4 0.0088577 102202 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 31.462 21.062 7969900 7969900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10032 2590 9134 85208 68238 68238 1 EAERTAELAEADAREK Unmodified 1787.865 0.86496967 249 O15078 CEP290 Centrosomal protein of 290 kDa yes yes 0 0 2 By MS/MS 2 0 1 1 31.13 27.895 3 0.0044211 35448 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 48.216 37.446 5644800 0 0 5644800 0 0 0 0 0 0 0 0 0 0 0 0 10033 249 9135 85209 68239 68239 1 EAESCDCLQGFQLTHSLGGGTGSGMGTLLLSK Unmodified 3310.5268 0.52681154 2678 Q3ZCM7 TUBB8 Tubulin beta-8 chain yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 93.027 88.944 3 1.5478E-45 109918 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.883 0 53270000 0 48344000 4925900 0 0 0 0 0 0 0 0 0 0 0 0 10034 2678 9136 85210;85211;85212 68240;68241 68240 2 EAESLIAK Unmodified 859.4651 0.46509784 1980 P78371 CCT2 T-complex protein 1 subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 2 1 1 27.266 27.475 2 0.0091721 27962 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 83.753 33.121 2470300000 0 0 0 125530000 97451000 221550000 146410000 155820000 96087000 249610000 338210000 241250000 212270000 241380000 344730000 10035 1980 9137 85213;85214;85215;85216;85217;85218;85219;85220;85221;85222;85223;85224;85225 68242;68243;68244;68245;68246;68247;68248;68249 68247 8 EAESSPFVER Unmodified 1149.5302 0.5302173 1002 P14625 HSP90B1 Endoplasmin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 36.648 35.544 2 1.4428E-09 40362 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 148.52 132.88 2798100000 28940000 757280000 6513400 96014000 85856000 183200000 118940000 95313000 84462000 170790000 252540000 205230000 163190000 183940000 365920000 10036 1002 9138 85226;85227;85228;85229;85230;85231;85232;85233;85234;85235;85236;85237;85238;85239;85240;85241 68250;68251;68252;68253;68254;68255;68256;68257;68258;68259;68260;68261;68262;68263;68264;68265 68264 12 EAESSPFVERLLK Unmodified 1503.7933 0.79330827 1002 P14625 HSP90B1 Endoplasmin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.11 0.567 1 6 2 4 3 2 85.173 81.555 2;3 2.9481E-33 95270 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 217.02 129.87 865800000 542720000 264050000 59023000 0 0 0 0 0 0 0 0 0 0 0 0 10037 1002 9139 85242;85243;85244;85245;85246;85247;85248;85249;85250 68266;68267;68268;68269;68270;68271;68272 68270 5 EAETQRLK Unmodified 973.51926 0.51925868 3100 Q7Z4Q2 HEATR3 HEAT repeat-containing protein 3 yes yes 0 0 1 By matching By MS/MS By matching 2.25 0.433 3 1 1 2 1 8.0898 4.9718 2 0.014702 6730 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 125.81 80.134 126000000 16432000 89462000 20106000 0 0 0 0 0 0 0 0 0 0 0 0 10038 3100 9140 85251;85252;85253;85254 68273;68274 68274 1 EAETRAEFAER Unmodified 1307.6106 0.61059288 1957;90;853;831;884 CON__Q3SX28;P06753;P07951;P09493;P67936 TPM3;TPM2;TPM1;TPM4 Tropomyosin alpha-3 chain;Tropomyosin beta chain;Tropomyosin alpha-1 chain;Tropomyosin alpha-4 chain no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 4 2 24 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 21.58 21.087 2;3 1.3052E-05 21088 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 105.25 86.745 + 3347800000 25498000 102850000 633990000 117070000 80963000 265360000 116070000 87357000 156590000 193280000 355880000 373650000 259760000 223470000 356010000 10039 90;831;853;884;1957 9141 85255;85256;85257;85258;85259;85260;85261;85262;85263;85264;85265;85266;85267;85268;85269;85270;85271;85272;85273;85274;85275;85276;85277;85278;85279;85280;85281;85282;85283;85284 68275;68276;68277;68278;68279;68280;68281;68282;68283;68284;68285;68286;68287;68288;68289;68290;68291;68292;68293;68294 68291 16 EAETRAEFAERSVAK Unmodified 1692.8431 0.84311201 90;853;831 CON__Q3SX28;P06753;P07951 TPM3;TPM2 Tropomyosin alpha-3 chain;Tropomyosin beta chain no no 0 0 2 By MS/MS By MS/MS By MS/MS 2.08 0.493 1 9 2 8 1 3 39.79 35.632 2;3;4 1.3911E-18 41122 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 137.27 104.65 + 3907200000 3066100000 122750000 718380000 0 0 0 0 0 0 0 0 0 0 0 0 10040 90;831;853 9142 85285;85286;85287;85288;85289;85290;85291;85292;85293;85294;85295;85296 68295;68296;68297;68298;68299;68300;68301;68302;68303;68304;68305 68303 7 EAETRAEFAERTVAK Unmodified 1706.8588 0.85876208 1957 P67936 TPM4 Tropomyosin alpha-4 chain yes yes 0 0 2 By MS/MS By MS/MS By MS/MS 2.14 0.639 1 4 2 4 1 2 46.76 43.442 3;4 0.00012866 39653 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 97.949 73.759 738980000 489330000 44871000 204790000 0 0 0 0 0 0 0 0 0 0 0 0 10041 1957 9143 85297;85298;85299;85300;85301;85302;85303 68306;68307;68308;68309;68310 68310 2 EAEVLLLQQR Unmodified 1197.6717 0.67173657 399 O60437 PPL Periplakin yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 66.789 66.67 2 0.00067415 77366 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 141.39 113.21 16131000 0 0 0 7685800 0 0 4173300 4271700 0 0 0 0 0 0 0 10042 399 9144 85304;85305;85306 68311;68312 68312 2 EAEYFFDSR Unmodified 1162.4931 0.49310351 2792 Q5TAX3 ZCCHC11 Terminal uridylyltransferase 4 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 60.894 61.055 2 0.029817 68798 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 48.423 42.119 16458000 0 0 0 0 1204700 0 0 0 0 2772600 3026600 0 3450100 1885700 4118400 10043 2792 9145 85307;85308;85309;85310;85311;85312 68313 68313 1 EAFAGDDVIRDFLK Unmodified 1594.7991 0.79912193 4189 Q9BVJ6;Q5TAP6 UTP14A;UTP14C U3 small nucleolar RNA-associated protein 14 homolog A;U3 small nucleolar RNA-associated protein 14 homolog C yes no 0 0 1 By MS/MS 2 0 1 1 94.648 86.517 3 0.041978 111896 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 24.697 17.815 8771800 8771800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10044 4189 9146 85313 68314 68314 1 EAFAIGLGGGSASGK Unmodified 1320.6674 0.66737948 4710 Q9NWZ5 UCKL1 Uridine-cytidine kinase-like 1 yes yes 0 0 0 By MS/MS 3 0 1 1 69.464 64.832 2 0.047101 79347 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 50.95 26.056 2650700 0 2650700 0 0 0 0 0 0 0 0 0 0 0 0 0 10045 4710 9147 85314 68315 68315 1 EAFAIVPVSPAEVR Unmodified 1483.8035 0.80347903 2419 Q14643 ITPR1 Inositol 1,4,5-trisphosphate receptor type 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 82.864 82.909 2 0.00036794 96015 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 74.944 57.08 26779000 0 0 0 1272300 2051900 2844000 2322000 2425200 2402700 2351300 2571000 4653700 3884800 0 0 10046 2419 9148 85315;85316;85317;85318;85319;85320;85321;85322;85323;85324 68316;68317;68318;68319;68320;68321;68322;68323;68324;68325 68316 9 EAFDEVDMAHR Unmodified 1318.5612 0.56119985 4715 Q9NX46 ADPRHL2 Poly(ADP-ribose) glycohydrolase ARH3 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 44.906 45.402 3 0.043665 49903 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 29.264 25.942 7980800 0 0 0 0 0 0 0 0 0 0 0 0 0 2450400 5530400 10047 4715 9149 85325;85326 68326 68326 1 EAFDTIQEQK Unmodified 1207.5721 0.57208211 2977 Q6UVJ0 SASS6 Spindle assembly abnormal protein 6 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 38.088 37.866 2 0.00014652 41639 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 163.99 123.72 209940000 0 27135000 0 10350000 10677000 11536000 15968000 18078000 9614900 13379000 13200000 29495000 15576000 17924000 17007000 10048 2977 9150 85327;85328;85329;85330;85331;85332;85333;85334;85335;85336;85337;85338;85339 68327;68328;68329;68330;68331;68332;68333;68334;68335;68336 68334 7 EAFEISK Unmodified 822.41233 0.41233399 2109 Q04917 YWHAH 14-3-3 protein eta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 39.797 34.736 2 0.024333 44721 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.77 25.927 717500000 91100000 604010000 22391000 0 0 0 0 0 0 0 0 0 0 0 0 10049 2109 9151 85340;85341;85342 68337;68338;68339;68340 68337 4 EAFEQLQAK Unmodified 1062.5346 0.53457439 629 O95229 ZWINT ZW10 interactor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.721 39.9 2 0.0042856 43028 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.323 39.474 132810000 0 0 0 6995600 8898800 11268000 9334200 8209100 6568900 13707000 11607000 14635000 11394000 10566000 19626000 10050 629 9152 85343;85344;85345;85346;85347;85348;85349;85350;85351;85352;85353;85354 68341;68342;68343;68344;68345;68346 68342 6 EAFEQPQTSSTPPR Unmodified 1573.7372 0.73724996 1688 P52564 MAP2K6 Dual specificity mitogen-activated protein kinase kinase 6 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 37.449 37.496 2 3.0618E-05 41572 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 85.958 77.004 22827000 0 0 0 2384000 2775600 2776400 0 0 0 3219600 4779000 0 3822300 3070200 0 10051 1688 9153 85355;85356;85357;85358;85359;85360;85361;85362 68347;68348;68349;68350;68351;68352 68347 6 EAFEQPQTSSTPPRDLDSK Unmodified 2132.0022 0.0021914296 1688 P52564 MAP2K6 Dual specificity mitogen-activated protein kinase kinase 6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.56 3.86 3 1 5 1 2 1 1 1 1 1 1 46.626 44.241 3 5.308E-14 59135 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 105.89 93.037 209410000 15885000 98219000 4396100 0 0 25494000 15444000 0 17167000 0 0 0 19882000 12919000 0 10052 1688 9154 85363;85364;85365;85366;85367;85368;85369;85370;85371 68353;68354;68355;68356;68357;68358;68359;68360;68361 68359 8 EAFETFINK Unmodified 1097.5393 0.53932542 2332 Q13620 CUL4B Cullin-4B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 66.521 65.655 2 0.010164 75180 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 64.734 47.176 413810000 0 310980000 7447000 4119600 5293500 10982000 6594800 6011200 4379700 8942100 9340600 9830000 7524900 8594800 13770000 10053 2332 9155 85372;85373;85374;85375;85376;85377;85378;85379;85380;85381;85382;85383;85384;85385;85386 68362;68363;68364;68365;68366;68367;68368;68369;68370;68371;68372;68373;68374;68375;68376 68370 15 EAFGFIERGDVVK Unmodified 1465.7565 0.75652884 517 O75534 CSDE1 Cold shock domain-containing protein E1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 4 10 2 1 1 1 1 1 1 1 1 1 1 1 1 72.103 70.881 2;3 1.8913E-05 92981 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.35 47.593 176160000 105170000 157420 14010000 0 0 4999900 2677900 3447200 3400400 5642800 5301000 5972900 3594600 2700400 19091000 10054 517 9156 85387;85388;85389;85390;85391;85392;85393;85394;85395;85396;85397;85398;85399;85400 68377;68378;68379;68380;68381 68379 5 EAFGQAHTNHK Unmodified 1238.5792 0.57923317 3495 Q8TD16 BICD2 Protein bicaudal D homolog 2 yes yes 0 0 0 By MS/MS 2 0 1 1 7.1835 4.9563 3 0.0030445 6871 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 49.777 38.851 24626000 0 0 24626000 0 0 0 0 0 0 0 0 0 0 0 0 10055 3495 9157 85401 68382 68382 1 EAFISEEEIAK Unmodified 1264.6187 0.61869795 3897 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 61.066 60.393 2 0.00055755 68839 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 81.338 62.067 465610000 0 187270000 0 17333000 16149000 18526000 23599000 18443000 19293000 31157000 32202000 29734000 17262000 20385000 34257000 10056 3897 9158 85402;85403;85404;85405;85406;85407;85408;85409;85410;85411;85412;85413;85414;85415 68383;68384;68385;68386;68387;68388;68389;68390;68391;68392;68393;68394;68395;68396;68397 68392 14 EAFLNTEDK Unmodified 1065.4979 0.49785453 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 36.275 36.636 2 2.201E-05 39288 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 136.27 111.37 74070000 0 0 0 0 0 12421000 0 0 4898300 8174900 8587500 11003000 4721300 8365300 15899000 10057 2344 9159 85416;85417;85418;85419;85420;85421;85422;85423 68398;68399;68400;68401;68402;68403;68404;68405 68400 7 EAFLQEVWK Unmodified 1148.5866 0.58660996 1210 P26640 VARS Valine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 81.481 81.571 2 0.0033979 94377 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 105.25 80.617 61978000 0 0 0 962680 0 8255500 2169300 3374700 2194600 5276400 3947300 5129500 2611200 5084900 22972000 10058 1210 9160 85424;85425;85426;85427;85428;85429;85430;85431;85432;85433;85434 68406;68407;68408;68409;68410;68411;68412;68413;68414;68415;68416 68407 11 EAFNEFQK Unmodified 1011.4662 0.46616048 3711 Q93100 PHKB Phosphorylase b kinase regulatory subunit beta yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 40.45 39.668 2 0.01026 44126 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 80.229 37.36 216990000 0 171670000 0 0 0 6060900 2986200 4142200 2846400 6919000 5989700 0 6744400 0 9633500 10059 3711 9161 85435;85436;85437;85438;85439;85440;85441;85442;85443;85444 68417;68418;68419 68419 3 EAFNMIDQNR Oxidation (M) 1252.5506 0.55063516 229 P19105;O14950;P24844 MYL12A;MYL12B;MYL9 Myosin regulatory light chain 12A;Myosin regulatory light chain 12B;Myosin regulatory light polypeptide 9 yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 34.503 34.685 2 0.0010198 36966 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 93.143 77.481 351770000 0 0 0 26029000 26804000 27229000 25515000 21118000 18857000 35809000 28695000 47724000 44787000 26201000 23000000 10060 229 9162 85445;85446;85447;85448;85449;85450;85451;85452;85453;85454;85455;85456;85457;85458;85459;85460;85461;85462;85463;85464;85465;85466;85467;85468 68420;68421;68422;68423;68424;68425;68426;68427;68428;68429;68430;68431;68432;68433;68434;68435;68436;68437;68438;68439;68440;68441;68442;68443;68444;68445 68440 302 24 EAFNMIDQNR Unmodified 1236.5557 0.55572054 229 P19105;O14950;P24844 MYL12A;MYL12B;MYL9 Myosin regulatory light chain 12A;Myosin regulatory light chain 12B;Myosin regulatory light polypeptide 9 yes no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.839 51.987 2 1.1272E-42 58733 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 189.7 162.74 481130000 0 0 0 28985000 43033000 46283000 28057000 35355000 18052000 37566000 42773000 66983000 36141000 31938000 65960000 10061 229 9162 85469;85470;85471;85472;85473;85474;85475;85476;85477;85478;85479;85480 68446;68447;68448;68449;68450;68451;68452;68453;68454;68455 68451 10 EAFNMIDQNRDGFIDK Unmodified 1911.8785 0.87851124 229 P19105;O14950;P24844 MYL12A;MYL12B;MYL9 Myosin regulatory light chain 12A;Myosin regulatory light chain 12B;Myosin regulatory light polypeptide 9 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.12 3 13 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 72.971 72.063 2;3 3.0207E-15 82878 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 102.38 95.604 916830000 56954000 123140000 27410000 18420000 18691000 98754000 19043000 45246000 53358000 54063000 62513000 85998000 44364000 57172000 151710000 10062 229 9163 85481;85482;85483;85484;85485;85486;85487;85488;85489;85490;85491;85492;85493;85494;85495;85496 68456;68457;68458;68459;68460;68461;68462;68463;68464;68465;68466;68467;68468;68469;68470;68471;68472;68473 68456 15 EAFNMIDQNRDGFIDK Oxidation (M) 1927.8734 0.87342586 229 P19105;O14950;P24844 MYL12A;MYL12B;MYL9 Myosin regulatory light chain 12A;Myosin regulatory light chain 12B;Myosin regulatory light polypeptide 9 yes no 0 1 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 9.52 1.91 2 31 1 1 3 3 2 3 2 3 2 2 3 2 3 3 59.895 59.87 2;3 4.6344E-06 67581 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 84.718 75.988 899780000 243730 0 50551000 85314000 83242000 23031000 103820000 11198000 121140000 18370000 20582000 175870000 18775000 91280000 96372000 10063 229 9163 85497;85498;85499;85500;85501;85502;85503;85504;85505;85506;85507;85508;85509;85510;85511;85512;85513;85514;85515;85516;85517;85518;85519;85520;85521;85522;85523;85524;85525;85526;85527;85528;85529 68474;68475;68476;68477;68478;68479;68480;68481;68482 68478 302 8 EAFNRESK Unmodified 979.47231 0.47230849 3199 Q86XP3 DDX42 ATP-dependent RNA helicase DDX42 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 7.5892 4.645 2 0.025548 6637 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 173.73 127.36 103930000 0 20060000 83872000 0 0 0 0 0 0 0 0 0 0 0 0 10064 3199 9164 85530;85531;85532 68483;68484;68485 68485 1 EAFQALEK Unmodified 934.476 0.47599688 2190 Q12792 TWF1 Twinfilin-1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.289 40.468 2 0.0050168 43837 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 108.46 70.902 182860000 0 0 0 6855000 6531300 13629000 8921000 7302800 4410700 15524000 24366000 20866000 10066000 18063000 46327000 10065 2190 9165 85533;85534;85535;85536;85537;85538;85539;85540;85541;85542;85543;85544 68486;68487;68488;68489 68488 3 EAFQLFDR Unmodified 1024.4978 0.49779495 1813 P60660 MYL6 Myosin light polypeptide 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.535 73.603 2 0.0047612 84639 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 109.01 84.858 2768900000 0 0 0 153190000 179890000 234820000 191370000 201560000 142200000 191200000 271630000 377320000 240090000 190310000 395290000 10066 1813 9166 85545;85546;85547;85548;85549;85550;85551;85552;85553;85554;85555;85556 68490;68491;68492;68493;68494;68495;68496;68497;68498;68499;68500;68501;68502;68503;68504;68505;68506 68490 17 EAFQLFDRTGDGK Unmodified 1482.7103 0.71030693 1813 P60660 MYL6 Myosin light polypeptide 6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.19 3.34 7 24 2 2 3 2 2 2 2 2 2 2 2 2 2 2 2 65.521 64.341 2;3 0.00077781 84214 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.089 65.811 1849700000 320230000 322940000 58323000 57169000 47998000 84524000 83315000 98188000 69964000 84554000 102140000 140330000 97411000 96345000 186260000 10067 1813 9167 85557;85558;85559;85560;85561;85562;85563;85564;85565;85566;85567;85568;85569;85570;85571;85572;85573;85574;85575;85576;85577;85578;85579;85580;85581;85582;85583;85584;85585;85586;85587 68507;68508;68509;68510;68511;68512;68513;68514;68515;68516;68517;68518;68519;68520;68521;68522;68523;68524;68525;68526 68510 13 EAFQSVVLPAFEK Unmodified 1463.766 0.76603089 2927 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 85.003 85.069 2 0.00057508 98508 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 77.379 69.999 102690000 0 0 0 4147800 5937200 10156000 7071400 8295600 6492100 10237000 8084900 10431000 7574600 9022600 15242000 10068 2927 9168 85588;85589;85590;85591;85592;85593;85594;85595;85596;85597;85598;85599 68527;68528;68529;68530;68531;68532;68533;68534;68535;68536;68537;68538;68539;68540;68541;68542;68543;68544;68545 68527 19 EAFRLLNK Unmodified 989.56581 0.56581494 2415 Q14566 MCM6 DNA replication licensing factor MCM6 yes yes 0 0 1 By MS/MS 2 0 1 1 58.798 50.593 2 0.03582 68697 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 126.04 28.968 32430000 32430000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10069 2415 9169 85600 68546 68546 0 EAFSDGITSVK Unmodified 1152.5663 0.56626845 864 P08243 ASNS Asparagine synthetase [glutamine-hydrolyzing] yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.2 3.82 3 2 5 1 4 1 1 1 1 1 52.689 49.9 2 0.00045973 64327 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.73 85.338 1260300000 40839000 1066700000 0 0 0 0 0 0 21004000 25027000 34946000 0 0 29251000 42535000 10070 864 9170 85601;85602;85603;85604;85605;85606;85607;85608;85609;85610 68547;68548;68549;68550;68551 68548 4 EAFSLFDK Unmodified 955.4651 0.46509784 912;1218 P0DP25;P0DP24;P0DP23;P27482 CALML3 Calmodulin-like protein 3 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.92 3.93 11 2 12 3 5 5 1 1 1 1 1 1 1 1 1 1 1 1 75.564 74.09 2 0.011977 83100 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.692 42.851 11255000000 1344800000 6697700000 692520000 198360000 86654000 97778000 97626000 156180000 84816000 88899000 344840000 390470000 143440000 181380000 649400000 10071 912;1218 9171 85611;85612;85613;85614;85615;85616;85617;85618;85619;85620;85621;85622;85623;85624;85625;85626;85627;85628;85629;85630;85631;85632;85633;85634;85635 68552;68553;68554;68555;68556;68557;68558;68559;68560;68561;68562;68563;68564;68565;68566;68567;68568;68569;68570;68571;68572 68559 21 EAFSLFDKDGDGTITTK Unmodified 1843.884 0.88397377 912 P0DP25;P0DP24;P0DP23 yes no 0 0 1 By MS/MS By MS/MS 2.5 0.5 2 2 2 2 78.755 74.778 3 1.3897E-18 93249 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.47 102.81 68810000 370070 68440000 0 0 0 0 0 0 0 0 0 0 0 0 0 10072 912 9172 85636;85637;85638;85639 68573;68574 68573 2 EAFTNKPNVFTVVTR Unmodified 1721.9101 0.91006937 487 O75369 FLNB Filamin-B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.285 72.356 3 0.00090615 83160 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 53.828 47.391 136000000 0 0 0 7001600 3560400 11189000 6125700 8322100 5345400 9935200 9416600 18935000 7436300 13939000 34795000 10073 487 9173 85640;85641;85642;85643;85644;85645;85646;85647;85648;85649;85650;85651 68575;68576;68577;68578;68579;68580;68581;68582;68583;68584;68585;68586 68576 12 EAFVTSAYK Unmodified 1014.5022 0.50221163 4327 Q9H0G5 NSRP1 Nuclear speckle splicing regulatory protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 45.812 40.734 2 0.045556 52895 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.698 62.211 70618000 0 70618000 0 0 0 0 0 0 0 0 0 0 0 0 0 10074 4327 9174 85652;85653 68587 68587 0 EAFVVEEWVK Unmodified 1234.6234 0.6233894 1358 P35606 COPB2 Coatomer subunit beta' yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 83.756 82.639 2 0.0024343 95376 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.647 69.44 155860000 20835000 50055000 7236500 781570 2167300 5124200 3936600 5234800 4456600 5721900 7018600 6291500 6736200 8457100 21807000 10075 1358 9175 85654;85655;85656;85657;85658;85659;85660;85661;85662;85663;85664;85665;85666;85667;85668;85669 68588;68589;68590;68591;68592;68593;68594;68595;68596;68597;68598;68599 68592 12 EAGAGGLAIAVEGPSK Unmodified 1425.7464 0.74635808 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.229 63.323 2 1.1863E-23 72152 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 143.86 127.22 557990000 0 0 0 19684000 23319000 47573000 29889000 23555000 19554000 53390000 68173000 68086000 33276000 46142000 125350000 10076 1124 9176 85670;85671;85672;85673;85674;85675;85676;85677;85678;85679;85680;85681 68600;68601;68602;68603;68604;68605;68606;68607;68608;68609;68610;68611;68612;68613;68614;68615;68616;68617;68618;68619;68620;68621;68622;68623;68624;68625;68626;68627;68628 68611 29 EAGAGGLSIAVEGPSK Unmodified 1441.7413 0.7412727 487 O75369 FLNB Filamin-B no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.795 60.9 2 0.00022053 68751 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.412 75.733 81919000 0 0 0 2528500 3241400 5368900 3520900 4747800 2766300 7225300 8865800 10788000 5138500 6569400 21158000 10077 487 9177 85682;85683;85684;85685;85686;85687;85688;85689;85690;85691;85692;85693 68629;68630;68631;68632;68633;68634;68635;68636;68637;68638;68639;68640 68632 11 EAGARGEPSGIEPSGLEEPPGPFVPEAAR Unmodified 2902.4097 0.40971481 3876 Q96IF1 AJUBA LIM domain-containing protein ajuba yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 79.242 79.177 3 9.9163E-07 91647 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 34.313 27.95 14242000 0 0 0 0 3520800 4437200 0 0 0 6284100 0 0 0 0 0 10078 3876 9178 85694;85695;85696;85697 68641;68642;68643 68642 2 EAGDAESRVFYLK Unmodified 1483.7307 0.73070802 1312 P31947 SFN 14-3-3 protein sigma yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 3 1 64.95 59.222 2;3 0.0015708 73163 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 73.466 61.883 701520000 144440000 265040000 292040000 0 0 0 0 0 0 0 0 0 0 0 0 10079 1312 9179 85698;85699;85700;85701;85702 68644;68645;68646;68647;68648 68647 5 EAGDFHFQPAVK Unmodified 1344.6463 0.64625011 4386 Q9H3S7 PTPN23 Tyrosine-protein phosphatase non-receptor type 23 yes yes 0 0 0 By MS/MS 2 0 1 1 61.291 55.415 3 0.0062219 71137 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 55.452 41.489 63259000 0 63259000 0 0 0 0 0 0 0 0 0 0 0 0 0 10080 4386 9180 85703 68649 68649 1 EAGDVCYADVQK Unmodified 1353.5871 0.58708025 2258 Q13242 SRSF9 Serine/arginine-rich splicing factor 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 34.291 34.421 2 0.00059921 36816 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 77.192 59.206 45758000 0 0 0 3198600 4082800 2609500 4316700 0 0 3709400 7857800 0 3513700 5682300 10787000 10081 2258 9181 85704;85705;85706;85707;85708;85709;85710;85711;85712 68650;68651;68652;68653;68654;68655;68656 68653 6 EAGDVCYADVYR Unmodified 1416.598 0.59797928 2145 Q07955 SRSF1 Serine/arginine-rich splicing factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 51 51.561 2 0.0017813 57403 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.056 56.193 17340000 0 0 0 0 0 0 0 0 0 0 6782000 0 0 0 10558000 10082 2145 9182 85713;85714;85715 68657;68658;68659 68658 2 EAGEGGEAEAPAAEGGK Unmodified 1528.6641 0.66414459 1256 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.81 1 4 11 3 1 1 1 1 1 1 1 1 1 1 1 1 1 24.98 24.295 2 9.9859E-70 92260 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 168.61 162.76 2288400000 394560000 32757000 3406500 0 68782000 89024000 111850000 84526000 82565000 154870000 362000000 283310000 145490000 182750000 292470000 10083 1256 9183 85716;85717;85718;85719;85720;85721;85722;85723;85724;85725;85726;85727;85728;85729;85730;85731 68660;68661;68662;68663;68664;68665;68666;68667;68668;68669;68670;68671;68672;68673;68674;68675;68676;68677 68667 18 EAGELKPEEEITVGPVQK Unmodified 1952.0102 0.01023692 1720 P53618 COPB1 Coatomer subunit beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.37 3.72 8 1 18 3 4 2 1 1 2 2 1 1 1 2 2 2 2 1 62.625 61.217 2;3 5.2193E-63 78702 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 183.96 178.68 1775100000 87385000 804680000 22869000 33294000 33371000 85010000 44405000 77172000 39194000 82287000 88861000 99121000 66385000 81601000 129460000 10084 1720 9184 85732;85733;85734;85735;85736;85737;85738;85739;85740;85741;85742;85743;85744;85745;85746;85747;85748;85749;85750;85751;85752;85753;85754;85755;85756;85757;85758 68678;68679;68680;68681;68682;68683;68684;68685;68686;68687;68688;68689;68690;68691;68692;68693;68694;68695;68696;68697 68681 16 EAGEQGDIEPR Unmodified 1199.5418 0.54184461 2263 Q13283 G3BP1 Ras GTPase-activating protein-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.845 20.048 2 2.4214E-05 20129 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 121.73 103.91 1068100000 0 0 0 102760000 88242000 103290000 77672000 78166000 66060000 112810000 97493000 90152000 76656000 65986000 108820000 10085 2263 9185 85759;85760;85761;85762;85763;85764;85765;85766;85767;85768;85769;85770 68698;68699;68700;68701;68702;68703;68704;68705;68706;68707;68708;68709;68710;68711 68709 14 EAGEQGDIEPRR Unmodified 1355.643 0.64295564 2263 Q13283 G3BP1 Ras GTPase-activating protein-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 15.35 15.492 3 0.010397 14510 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 27.33 19.225 65117000 0 0 0 5452200 4068800 3596700 8413500 0 4473400 5198600 7518500 0 10643000 6294700 9457400 10086 2263 9186 85771;85772;85773;85774;85775;85776;85777;85778;85779;85780 68712;68713;68714 68713 3 EAGGGGVGGPGAK Unmodified 1012.4938 0.49377221 3405 Q8NC51 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 6.94 3.85 1 4 2 11 3 3 1 1 1 1 1 1 1 1 1 1 1 1 13.711 13.145 2 0.00024615 5747 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 82.749 70.393 967140000 286300000 381460000 7229900 20785000 20468000 22516000 26141000 24314000 24507000 0 54019000 28642000 23040000 18966000 28751000 10087 3405 9187 85781;85782;85783;85784;85785;85786;85787;85788;85789;85790;85791;85792;85793;85794;85795;85796;85797;85798 68715;68716;68717;68718;68719;68720;68721;68722;68723;68724;68725;68726;68727;68728;68729;68730;68731;68732 68716 16 EAGGNYTPALTEQEVYAQVAR Unmodified 2266.0866 0.086589761 3994 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 9.27 2.3 2 20 2 2 2 2 2 2 2 2 1 2 1 2 80.034 79.696 2;3 1.3352E-12 97672 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.97 114.18 258380000 0 46726000 0 0 11611000 17601000 10275000 17252000 17969000 28599000 24528000 10530000 13180000 7488900 52620000 10088 3994 9188 85799;85800;85801;85802;85803;85804;85805;85806;85807;85808;85809;85810;85811;85812;85813;85814;85815;85816;85817;85818;85819;85820 68733;68734;68735;68736;68737 68734 4 EAGICYASIAMATDYDCWK Unmodified 2223.9275 0.92751162 2237 Q13126 MTAP S-methyl-5'-thioadenosine phosphorylase yes yes 0 0 0 By MS/MS 2 0 1 1 92.84 84.71 2 4.4968E-13 109777 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 126.63 121.25 8871100 8871100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10089 2237 9189 85821 68738 68738 1 EAGLAHLCEFIEDCEHTVLATK Unmodified 2542.1832 0.18320904 4839 Q9UBF2 COPG2 Coatomer subunit gamma-2 yes yes 0 0 0 By MS/MS 2 0 2 2 97.027 88.897 3;4 5.0854E-40 114816 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 121.82 104.39 63177000 63177000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10090 4839 9190 85822;85823 68739;68740 68740 2 EAGLAPVPMIIFAK Oxidation (M) 1471.8109 0.81087259 816 P06132 UROD Uroporphyrinogen decarboxylase yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 87.781 87.959 2 0.0015217 101731 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.092 40.505 14186000 0 0 0 0 0 0 0 0 0 0 3443000 0 0 0 10743000 10091 816 9191 85824;85825 68741;68742 68741 983 2 EAGLAPVPMIIFAK Unmodified 1455.816 0.81595797 816 P06132 UROD Uroporphyrinogen decarboxylase yes yes 0 0 0 By MS/MS 10 0 1 1 94.526 94.673 2 0.0010944 109727 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.161 55.621 3757000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3757000 10092 816 9191 85826 68743 68743 1 EAGLSNAAFESDFK Unmodified 1484.6783 0.6783381 3469 Q8NI77 KIF18A Kinesin-like protein KIF18A yes yes 0 0 0 By MS/MS 2 0 1 1 75.079 70.139 2 0.0013709 87829 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.159 45.221 35402000 0 35402000 0 0 0 0 0 0 0 0 0 0 0 0 0 10093 3469 9192 85827 68744 68744 1 EAGLSWK Unmodified 789.4021 0.40210366 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.902 40.081 2 0.023527 43925 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 92.467 92.467 1130600000 0 0 0 54598000 63070000 82717000 77303000 79031000 74921000 104680000 117790000 139430000 98630000 100860000 137540000 10094 2102 9193 85828;85829;85830;85831;85832;85833;85834;85835;85836;85837;85838;85839 68745;68746;68747 68746 3 EAGMFAPTQR Unmodified 1106.5179 0.51787847 1577 P49585 PCYT1A Choline-phosphate cytidylyltransferase A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 39.717 39.916 2 0.0015463 44029 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 105.36 84.733 113520000 0 0 0 6323700 8117000 10210000 0 0 0 11169000 18375000 15190000 10633000 12846000 20659000 10095 1577 9194 85840;85841;85842;85843;85844;85845;85846;85847;85848 68748;68749;68750;68751;68752;68753;68754;68755 68750 8 EAGMQPQLQIR Oxidation (M) 1285.6449 0.6448699 5206 Q9Y4L1 HYOU1 Hypoxia up-regulated protein 1 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 42.907 43.167 2 0.0012859 48020 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 69.954 41.555 26095000 0 0 0 0 0 0 3757100 2356900 0 0 8721600 0 7610300 3648700 0 10096 5206 9195 85849;85850;85851;85852;85853 68756;68757;68758;68759 68757 6602 4 EAGMQPQLQIR Unmodified 1269.65 0.64995528 5206 Q9Y4L1 HYOU1 Hypoxia up-regulated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 54.193 54.569 2 0.025289 61722 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 40.728 27.274 39520000 0 0 0 0 0 0 0 0 0 0 6722200 0 4461400 6396900 21939000 10097 5206 9195 85854;85855;85856;85857 68760;68761 68760 2 EAGNINQSLLTLGR Unmodified 1484.7947 0.79470526 1695 P52732 KIF11 Kinesin-like protein KIF11 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.364 76.422 2 2.7567E-16 87307 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 119.74 104.15 97306000 0 0 0 4616500 4899500 6970300 7517000 8702500 5360500 8914500 11032000 11568000 7114500 8909700 11702000 10098 1695 9196 85858;85859;85860;85861;85862;85863;85864;85865;85866;85867;85868;85869 68762;68763;68764;68765;68766;68767;68768;68769;68770;68771;68772 68769 11 EAGNINQSLMTLR Oxidation (M) 1461.7246 0.72457678 2072 Q02241 KIF23 Kinesin-like protein KIF23 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 56.266 56.63 2 0.00066314 64273 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 66.56 53.207 45159000 0 0 0 0 0 0 0 0 0 9118800 6473800 8856800 6962700 6419500 7327100 10099 2072 9197 85870;85871;85872;85873;85874;85875 68773;68774;68775;68776;68777 68775 3363 5 EAGNINQSLMTLR Unmodified 1445.7297 0.72966216 2072 Q02241 KIF23 Kinesin-like protein KIF23 yes yes 0 0 0 By MS/MS 10 0 1 1 70.336 69.709 2 0.014779 80791 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 40.589 25.915 2291200 0 0 0 2291200 0 0 0 0 0 0 0 0 0 0 0 10100 2072 9197 85876 68778 68778 1 EAGNLEGILLTGLTK Unmodified 1527.8508 0.85082315 4723 Q9NXC5 MIOS WD repeat-containing protein mio yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 93.497 91.975 2 0.00035018 114210 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.856 81.501 24928000 0 23543000 0 0 0 0 0 0 0 537800 0 0 0 0 847390 10101 4723 9198 85877;85878;85879 68779;68780 68779 2 EAGQNFEIIFVSADRSEESFK Unmodified 2402.139 0.13901926 2872 Q6DKJ4 NXN Nucleoredoxin yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 91.422 85.587 3 8.3322E-07 88870 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 60.034 56.747 37345000 37345000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10102 2872 9199 85880;85881 68781;68782 68781 1 EAGQRLQK Unmodified 928.50903 0.50902834 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 0 1 By MS/MS 2 0 1 1 5.8544 2.477 2 0.025719 5570 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 120.62 51.189 385330000 385330000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10103 643 9200 85882 68783 68783 0 EAGRMCYAIIQAESK Unmodified 1725.8178 0.81782524 39 A9UHW6 MIF4GD MIF4G domain-containing protein yes yes 0 0 1 By MS/MS 2 0 1 1 67.279 58.985 3 0.004715 79083 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 38.116 26.854 13840000 13840000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10104 39 9201 85883 68784 68784 1 EAGSEPAPEQESTEATPAE Unmodified 1928.8123 0.81232497 2974 Q6UN15 FIP1L1 Pre-mRNA 3'-end-processing factor FIP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.497 36.677 2 1.5712E-08 40275 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 83.182 81.715 131230000 0 0 0 7158400 6841600 8747700 9428500 8547300 8320500 10455000 11380000 13269000 13089000 12550000 21442000 10105 2974 9202 85884;85885;85886;85887;85888;85889;85890;85891;85892;85893;85894;85895 68785;68786;68787;68788;68789;68790;68791 68791 7 EAGSVSLRMK Unmodified 1076.5648 0.56482866 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS 2 0 1 1 36.996 30.567 2 2.6896E-05 42551 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 146.27 98.239 34912000 34912000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10106 2344 9203 85896 68792;68793;68794 68794 3 EAGTDNRNIVDDGK Unmodified 1502.6961 0.69611342 4936 Q9UJA5 TRMT6 tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 5.4 3.77 2 1 2 2 1 1 1 18.468 16.635 3 0.0056195 21535 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 49.62 20.076 50548000 0 40864000 1008500 0 0 0 0 0 0 0 0 0 0 2392600 6283300 10107 4936 9204 85897;85898;85899;85900;85901 68795;68796;68797 68795 2 EAGTPSLDSEAK Unmodified 1203.5619 0.56191135 3155 Q86UU0 BCL9L B-cell CLL/lymphoma 9-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 27.19 27.252 2 0.0010378 29291 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 86.898 54.086 65739000 0 0 0 6673500 6576800 11545000 7161000 7523400 7249200 0 9364400 0 0 9645800 0 10108 3155 9205 85902;85903;85904;85905;85906;85907;85908;85909 68798;68799;68800 68799 3 EAGTVGRGGGQEER Unmodified 1401.6597 0.65966834 4481 Q9HA64 FN3KRP Ketosamine-3-kinase yes yes 0 0 1 By MS/MS 10 0 1 1 11.347 11.21 3 0.00094292 10151 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 41.577 0 5696800 0 0 0 5696800 0 0 0 0 0 0 0 0 0 0 0 10109 4481 9206 85910 68801 68801 1 EAGVDGMEVIAFVK Oxidation (M) 1479.7279 0.72793082 5387 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS 8.2 3.6 1 4 1 1 1 2 83.786 83.957 2 0.0042192 96933 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.512 16.031 + 35963000 0 0 0 0 0 0 0 0 0 0 5187900 0 0 5347100 25428000 10110 5387 9207 85911;85912;85913;85914;85915 68802;68803;68804;68805 68803 6763 3 EAGVEMGDEDDLSTPNEK Oxidation (M) 1950.8 0.80004573 1009 P14868 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 38.418 38.599 2 2.5922E-26 42443 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 106.58 100.97 80301000 0 0 0 6793000 4830700 8026500 8374900 0 5425000 6583600 7885100 11649000 7222100 5158600 8352900 10111 1009 9208 85916;85917;85918;85919;85920;85921;85922;85923;85924;85925;85926 68806;68807;68808;68809;68810;68811;68812;68813;68814;68815;68816;68817 68815 1386 12 EAGVEMGDEDDLSTPNEK Unmodified 1934.8051 0.80513111 1009 P14868 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 50.563 50.996 2 6.504E-113 57452 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 197.38 192.21 51475000 0 0 0 0 0 0 0 0 0 21012000 11296000 0 0 0 19168000 10112 1009 9208 85927;85928;85929;85930;85931;85932;85933;85934 68818;68819;68820;68821;68822;68823;68824;68825 68822 8 EAGVFVPR Unmodified 873.47085 0.47085192 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 1 1 3 2 2 1 1 1 1 1 1 44.443 44.6 2 0.0050749 48205 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 108.24 90.471 15677000000 0 0 0 554600000 1019200000 789160000 2686500000 3192800000 2843600000 813870000 1252400000 2193700000 60916000 102310000 167600000 10113 1714 9209 85935;85936;85937;85938;85939;85940;85941;85942;85943;85944;85945;85946;85947;85948;85949;85950 68826;68827;68828;68829;68830;68831;68832;68833;68834;68835;68836;68837;68838;68839;68840;68841;68842;68843;68844;68845;68846;68847;68848;68849;68850;68851;68852;68853;68854;68855 68837 30 EAHAQAGVQVK Unmodified 1136.5938 0.5938206 1784 P56524 HDAC4 Histone deacetylase 4 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 13.787 10.396 2 0.0041694 13940 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.099 40.996 14789000 0 14789000 0 0 0 0 0 0 0 0 0 0 0 0 0 10114 1784 9210 85951;85952 68856 68856 1 EAHAQSIGMNR Oxidation (M) 1228.5619 0.56186855 1183 P25205 MCM3 DNA replication licensing factor MCM3 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 21 2 1 2 2 2 2 2 2 2 1 1 2 7.5297 7.6607 2;3 0.0001921 5034 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.649 81.88 133080000 0 0 0 4243400 5076200 8574800 8424400 6596800 6210100 9195600 29971000 24178000 2270800 3417400 24918000 10115 1183 9211 85953;85954;85955;85956;85957;85958;85959;85960;85961;85962;85963;85964;85965;85966;85967;85968;85969;85970;85971;85972;85973 68857;68858;68859;68860;68861 68860 1713 4 EAHAQSIGMNR Unmodified 1212.567 0.56695393 1183 P25205 MCM3 DNA replication licensing factor MCM3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 2 2 1 1 1 1 2 2 1 15.935 16.127 2;3 0.0012743 14649 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 51.531 41.074 123410000 0 0 0 6895100 0 11687000 8932800 7174200 6508800 10211000 7866400 26316000 17355000 20465000 0 10116 1183 9211 85974;85975;85976;85977;85978;85979;85980;85981;85982;85983;85984;85985;85986;85987 68862;68863;68864;68865 68865 4 EAHDRAENTQFVK Unmodified 1543.7379 0.73791866 1282 P30519 HMOX2 Heme oxygenase 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 16.504 16.824 3 0.012122 15956 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 27.33 13.32 47855000 0 0 0 0 0 0 0 4357600 4255000 3480800 8194600 9658300 6627100 4757000 6524700 10117 1282 9212 85988;85989;85990;85991;85992;85993;85994;85995 68866 68866 1 EAHEPLAVADAK Unmodified 1249.6303 0.63026569 5125 Q9Y2X3 NOP58 Nucleolar protein 58 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 2 1 1 1 31.746 30.918 2;3 1.8076E-05 34201 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 69.261 53.298 180810000 4126300 72747000 0 6213200 7959800 13585000 8876300 0 7805100 8600000 12535000 24810000 7798800 5754200 0 10118 5125 9213 85996;85997;85998;85999;86000;86001;86002;86003;86004;86005;86006;86007;86008;86009 68867;68868;68869;68870;68871;68872;68873;68874;68875;68876 68876 6 EAHKPPVFIEK Unmodified 1293.7081 0.70812208 3581 Q8WX93 PALLD Palladin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.72 2 13 1 1 1 1 1 1 1 1 1 1 1 1 1 2 35.693 35.196 2;3 4.6919E-05 38810 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 97.911 66.069 1321900000 421250000 0 88465000 34235000 27215000 60839000 38859000 30100000 52293000 77804000 65117000 51930000 95499000 86139000 192130000 10119 3581 9214 86010;86011;86012;86013;86014;86015;86016;86017;86018;86019;86020;86021;86022;86023;86024 68877;68878;68879;68880;68881;68882;68883;68884;68885;68886;68887;68888;68889;68890;68891 68889 9 EAHLPPGAMAAVGLSWEECK Unmodified 2152.0081 0.0081452054 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 2 2 2 2 87.313 82.362 3 6.9536E-24 103755 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 111.66 103.47 120800000 30782000 90018000 0 0 0 0 0 0 0 0 0 0 0 0 0 10120 1565 9215 86025;86026;86027;86028 68892;68893;68894;68895;68896 68892 5 EAHLPPGAMAAVGLSWEECK Oxidation (M) 2168.0031 0.0030598275 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 1 0 By MS/MS 2 0 1 1 81.417 73.286 3 5.2041E-05 95656 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.708 48.108 17585000 17585000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10121 1565 9215 86029 68897 68897 2492 1 EAHLTPYSLQAIK Unmodified 1469.7878 0.78782897 1349 P35251 RFC1 Replication factor C subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 67.693 66.439 3 1.6925E-05 74642 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 68.676 59.238 143530000 48482000 17193000 10308000 2839100 4805000 4901600 6579100 6344300 5132900 6351100 0 0 8047000 9487500 13061000 10122 1349 9216 86030;86031;86032;86033;86034;86035;86036;86037;86038;86039;86040;86041;86042 68898;68899;68900;68901;68902;68903;68904;68905;68906;68907;68908;68909;68910 68908 12 EAHQLFLEPEVLDPESVELK Unmodified 2321.1791 0.17909316 1405 P39748 FEN1 Flap endonuclease 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.87 3.65 7 3 5 2 6 2 1 1 1 1 1 91.581 88.939 2;3 6.5413E-119 111436 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 195.2 159.85 2312800000 973050000 1113200000 180460000 0 0 0 0 0 0 8486400 5999000 5093200 0 2506900 24000000 10123 1405 9217 86043;86044;86045;86046;86047;86048;86049;86050;86051;86052;86053;86054;86055;86056;86057 68911;68912;68913;68914;68915;68916;68917;68918;68919;68920;68921;68922;68923;68924;68925;68926;68927;68928;68929;68930 68913 20 EAHSDENPSEGDGAVNK Unmodified 1754.7343 0.73434942 4778 Q9NZN5 ARHGEF12 Rho guanine nucleotide exchange factor 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 10.395 10.588 3 0.00036665 9821 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 56.959 54.597 32260000 0 0 0 0 0 4435700 2560000 2017900 1920100 3091400 2435100 4456000 3199900 3028500 5115600 10124 4778 9218 86058;86059;86060;86061;86062;86063;86064;86065;86066;86067 68931;68932;68933;68934;68935;68936 68931 6 EAIAEHAK Unmodified 867.44503 0.4450311 2685 Q4J6C6 PREPL Prolyl endopeptidase-like yes yes 0 0 0 By matching By MS/MS By MS/MS 2 0 3 1 1 1 7.1876 4.1957 2 0.031208 6145 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.243 59.804 282940000 10438000 258760000 13746000 0 0 0 0 0 0 0 0 0 0 0 0 10125 2685 9219 86068;86069;86070 68937 68937 1 EAIDSYIK Unmodified 937.47566 0.47566253 2040 Q00610 CLTC Clathrin heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48.301 47.248 2 0.01266 53948 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 74.127 25.367 2619600000 51376000 1763900000 16521000 26672000 35460000 67184000 40957000 37844000 31630000 71279000 109490000 103050000 53111000 69766000 141350000 10126 2040 9220 86071;86072;86073;86074;86075;86076;86077;86078;86079;86080;86081;86082;86083;86084;86085 68938;68939;68940;68941;68942;68943;68944;68945;68946;68947;68948;68949;68950;68951;68952 68952 13 EAIEGTYIDK Unmodified 1137.5554 0.55536941 1888 P62280 RPS11 40S ribosomal protein S11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.34 1 2 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 42.073 41.661 2 0.00017649 46673 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 131.44 104.84 2127100000 28241000 0 0 91606000 123390000 150160000 108120000 143340000 135790000 202270000 242750000 240720000 224390000 201600000 234740000 10127 1888 9221 86086;86087;86088;86089;86090;86091;86092;86093;86094;86095;86096;86097;86098;86099;86100 68953;68954;68955;68956;68957;68958;68959;68960;68961;68962;68963;68964;68965 68958 9 EAIEGTYIDKK Unmodified 1265.6503 0.65033243 1888 P62280 RPS11 40S ribosomal protein S11 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 1 2 2 1 2 2 2 2 2 2 32.656 32.852 2;3 0.002122 36334 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 91.584 63.375 258140000 0 0 0 18911000 24405000 8337700 19213000 21178000 6673000 22731000 26518000 44822000 18647000 19044000 27664000 10128 1888 9222 86101;86102;86103;86104;86105;86106;86107;86108;86109;86110;86111;86112;86113;86114;86115;86116;86117;86118;86119;86120;86121;86122 68966;68967;68968;68969;68970;68971;68972;68973;68974;68975;68976;68977;68978;68979 68978 12 EAIELREAVEQQK Unmodified 1541.8049 0.80493559 4817 Q9P2E9 RRBP1 Ribosome-binding protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 51.387 47.466 3 0.015863 59582 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 33.685 19.968 9339700 0 0 9339700 0 0 0 0 0 0 0 0 0 0 0 0 10129 4817 9223 86123 68980 68980 1 EAIENATTNAEVLR Unmodified 1529.7686 0.76855009 4241 Q9BY43 CHMP4A Charged multivesicular body protein 4a yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.438 52.581 2 2.6457E-19 58173 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 172.61 147.74 152320000 0 0 0 4438900 3139300 3390300 8961100 6384000 4431100 9587700 21955000 23567000 9428700 18488000 38546000 10130 4241 9224 86124;86125;86126;86127;86128;86129;86130;86131;86132;86133;86134;86135 68981;68982;68983;68984;68985;68986;68987;68988;68989;68990;68991 68983 11 EAIERLK Unmodified 857.49707 0.49706667 1745;1746 P54725;P54727 RAD23A;RAD23B UV excision repair protein RAD23 homolog A;UV excision repair protein RAD23 homolog B no no 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 21.576 17.746 2 0.024877 23733 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.06 5.572 1894300000 304280000 597740000 992290000 0 0 0 0 0 0 0 0 0 0 0 0 10131 1745;1746 9225 86136;86137;86138;86139 68992;68993;68994 68992 0 EAIESAIGGNAYQHSK Unmodified 1673.8009 0.80091285 1944 P63172 DYNLT1 Dynein light chain Tctex-type 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.83 3.76 3 2 7 4 1 1 1 1 1 1 1 1 44.781 42.737 2;3 4.7276E-61 55714 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 180.24 134.08 149070000 0 91652000 2677400 6371900 7097600 0 0 6595000 0 10779000 8986500 0 7897700 7017700 0 10132 1944 9226 86140;86141;86142;86143;86144;86145;86146;86147;86148;86149;86150;86151 68995;68996;68997;68998;68999;69000;69001;69002;69003;69004 68997 10 EAIETQLAEYHK Unmodified 1430.7042 0.70415892 214 O14777 NDC80 Kinetochore protein NDC80 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.87 3.54 4 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 50.83 49.36 2;3 0.0027834 63964 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.38 67.435 386430000 6522300 193120000 4581800 10710000 10882000 17357000 22411000 10967000 16035000 13752000 14407000 22512000 16957000 0 26220000 10133 214 9227 86152;86153;86154;86155;86156;86157;86158;86159;86160;86161;86162;86163;86164;86165;86166 69005;69006;69007;69008;69009 69006 5 EAIHSQLLEK Unmodified 1166.6295 0.62953741 446 O60925 PFDN1 Prefoldin subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.37 3.73 1 6 2 18 3 4 2 1 2 2 2 1 2 2 2 2 2 39.43 38.281 2;3 7.6237E-11 45409 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 218.6 108.89 1352700000 141640000 564410000 431230000 1342900 5207900 0 6227600 7178500 5085300 15553000 42180000 30084000 0 24313000 78200000 10134 446 9228 86167;86168;86169;86170;86171;86172;86173;86174;86175;86176;86177;86178;86179;86180;86181;86182;86183;86184;86185;86186;86187;86188;86189;86190;86191;86192;86193 69010;69011;69012;69013;69014;69015;69016;69017;69018;69019 69017 6 EAIIPGSVYDR Unmodified 1218.6245 0.62445203 3683 Q92900 UPF1 Regulator of nonsense transcripts 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.503 61.603 2 0.00063875 69309 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 90.629 64.892 189890000 0 0 0 8994200 9452100 13412000 13169000 11309000 9187100 17133000 19304000 17926000 17106000 16227000 36670000 10135 3683 9229 86194;86195;86196;86197;86198;86199;86200;86201;86202;86203;86204;86205 69020;69021;69022;69023;69024;69025;69026;69027;69028;69029;69030;69031 69028 12 EAIIVGQVNYPK Unmodified 1329.7293 0.72925145 3728 Q969V6 MKL1 MKL/myocardin-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 66.396 66.548 2 0.0041547 76270 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 58.433 31.919 35622000 0 0 0 0 2382600 4893100 3880300 2707700 0 0 7882100 6806300 0 0 7070200 10136 3728 9230 86206;86207;86208;86209;86210;86211;86212;86213;86214 69032;69033;69034;69035;69036;69037;69038;69039 69036 8 EAILAIHK Unmodified 893.53345 0.53345218 356 O43707 ACTN4 Alpha-actinin-4 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.083 38.263 2 0.012874 42420 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 73.637 43.412 520410000 0 0 0 29311000 14726000 32232000 21892000 17985000 11768000 26576000 65371000 103180000 19814000 40400000 137150000 10137 356 9231 86215;86216;86217;86218;86219;86220;86221;86222;86223;86224;86225;86226 69040;69041;69042;69043;69044 69043 4 EAILDIITSR Unmodified 1129.6343 0.63428844 857 P08133 ANXA6 Annexin A6 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 84.239 84.387 2 0.026327 97368 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.318 22.232 15808000 0 0 0 0 0 2535800 0 2652200 2583100 0 0 0 0 0 8037200 10138 857 9232 86227;86228;86229;86230 69045 69045 1 EAILNDEIYCPPETAVLLASYAVQAK Unmodified 2877.447 0.44701152 1345 P35241 RDX Radixin yes yes 0 0 0 By MS/MS 2 0 1 1 99.899 91.768 3 8.7924E-48 118239 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.465 80.774 26549000 26549000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10139 1345 9233 86231 69046 69046 1 EAINLLEPMTNDPVNYVR Oxidation (M) 2103.0307 0.030654787 4011 Q99460 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 2 1 2 2 2 2 83.593 83.659 2;3 3.8074E-47 97016 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 139.89 124.5 224160000 0 0 0 1199800 7628600 21178000 4283900 0 0 66435000 43748000 56306000 0 0 23377000 10140 4011 9234 86232;86233;86234;86235;86236;86237;86238;86239;86240;86241;86242;86243;86244 69047;69048;69049;69050;69051;69052;69053;69054 69052 5498 6 EAINLLEPMTNDPVNYVR Unmodified 2087.0357 0.035740164 4011 Q99460 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 0 0 By matching By MS/MS By matching By matching 10 0 4 1 1 1 1 89.284 89.431 2 0.0061838 103848 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 49.423 45.18 11568000 0 0 0 0 0 0 0 0 0 3846900 2593800 2049600 0 0 3077700 10141 4011 9234 86245;86246;86247;86248 69055 69055 1 EAINVEQAFQTIAR Unmodified 1588.8209 0.82092001 1647 P51149 RAB7A Ras-related protein Rab-7a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 2 24 1 1 2 2 2 2 2 2 2 2 2 2 2 2 86.895 86.77 2;3 1.1519E-177 100425 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 227.37 203.08 960620000 306160 19620000 0 11870000 37073000 47941000 45428000 74624000 54032000 125520000 111050000 137700000 46303000 64961000 184190000 10142 1647 9235 86249;86250;86251;86252;86253;86254;86255;86256;86257;86258;86259;86260;86261;86262;86263;86264;86265;86266;86267;86268;86269;86270;86271;86272;86273;86274 69056;69057;69058;69059;69060;69061;69062;69063;69064;69065;69066;69067;69068;69069;69070;69071;69072;69073;69074;69075 69059 18 EAIQCVDNNQSVLVSAHTSAGK Unmodified 2327.1176 0.11757231 1451 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 53.801 54.037 3 5.9463E-05 61157 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 45.784 42.123 61137000 0 0 0 0 0 23598000 0 0 0 0 12414000 0 13330000 11795000 0 10143 1451 9236 86275;86276;86277;86278 69076;69077;69078 69077 3 EAIQHPADEK Unmodified 1136.5462 0.54620171 4654 Q9NUQ9 FAM49B Protein FAM49B yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 8.0264 8.1319 2 0.00051073 5192 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 134.26 92.608 9559300 0 0 0 0 0 4192400 0 0 0 0 0 0 0 5366900 0 10144 4654 9237 86279;86280 69079;69080;69081 69081 2 EAIQLIAR Unmodified 912.53927 0.53926584 1380 P36871 PGM1 Phosphoglucomutase-1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 54.235 54.56 2 0.015683 61614 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 68.485 41.364 154990000 0 0 0 0 0 4464800 0 3923500 3010800 5444600 30014000 24077000 0 0 84053000 10145 1380 9238 86281;86282;86283;86284;86285;86286;86287;86288 69082;69083;69084 69083 2 EAIQQQQNQLVWVSEGK Unmodified 1984.0014 0.0014035686 2136 Q07157 TJP1 Tight junction protein ZO-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 71.554 71.241 2 6.389E-72 88116 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 219.35 197.3 90833000 0 41985000 0 4296600 3512500 4111700 2691200 2450000 3748000 5491500 4942200 5178800 2947600 3235200 6242800 10146 2136 9239 86289;86290;86291;86292;86293;86294;86295;86296;86297;86298;86299;86300;86301 69085;69086;69087;69088;69089;69090;69091;69092;69093 69088 9 EAIREASFSPTDNK Unmodified 1563.7529 0.75290002 4293 Q9C0J8 WDR33 pre-mRNA 3' end processing protein WDR33 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 41.656 37.175 3 0.00021081 47159 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 98.592 81.381 43803000 0 30153000 13650000 0 0 0 0 0 0 0 0 0 0 0 0 10147 4293 9240 86302;86303;86304 69094;69095 69095 1 EAIREHQMAK Unmodified 1211.6081 0.60809046 1149 P23193 TCEA1 Transcription elongation factor A protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.36 3.98 5 6 2 1 2 1 1 1 1 1 1 9.3615 7.8926 2;3 0.0002222 12595 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 147.78 114.23 507590000 329800000 3866100 16217000 5661800 0 0 0 0 0 0 68358000 27398000 0 13033000 43261000 10148 1149 9241 86305;86306;86307;86308;86309;86310;86311;86312;86313;86314;86315 69096;69097;69098;69099;69100;69101;69102 69098 5 EAIREHQMAK Oxidation (M) 1227.603 0.60300508 1149 P23193 TCEA1 Transcription elongation factor A protein 1 yes yes 0 1 1 By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 5.738 4.8628 2;3 0.0059898 5849 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 120.76 82.196 389020000 275910000 0 24270000 0 12412000 0 31301000 0 0 22231000 22895000 0 0 0 0 10149 1149 9241 86316;86317;86318;86319;86320;86321;86322 69103;69104;69105 69104 1644 2 EAISDAALEATENEPLNK Unmodified 1913.9218 0.92181584 2456 Q14966 ZNF638 Zinc finger protein 638 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.68 1.57 1 24 1 2 2 2 2 2 2 2 2 2 2 2 2 71.914 71.78 2;3 0 87834 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 306.64 295 180990000 0 39138000 0 7496400 11166000 11382000 9572600 9331600 7497300 12900000 12496000 13827000 12309000 13584000 20288000 10150 2456 9242 86323;86324;86325;86326;86327;86328;86329;86330;86331;86332;86333;86334;86335;86336;86337;86338;86339;86340;86341;86342;86343;86344;86345;86346;86347 69106;69107;69108;69109;69110;69111;69112;69113;69114;69115;69116;69117;69118 69109 13 EAISDLQQLWK Unmodified 1329.6929 0.69286595 578 O76094 SRP72 Signal recognition particle subunit SRP72 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84.197 83.731 2 2.0789E-05 96954 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 146.81 121.25 271940000 0 121310000 1077600 2469600 4230700 8913800 6684700 18769000 14285000 18832000 17384000 12693000 8148500 12558000 24587000 10151 578 9243 86348;86349;86350;86351;86352;86353;86354;86355;86356;86357;86358;86359;86360;86361 69119;69120;69121;69122;69123;69124;69125;69126;69127;69128;69129;69130;69131;69132 69120 13 EAISLVCEAVPGAK Unmodified 1442.7439 0.74391524 1245 P29353 SHC1 SHC-transforming protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 73.867 74.022 2 0.0087569 84415 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 41.598 30.57 40375000 0 0 0 0 0 5240100 2652400 0 3664300 5834500 0 8231800 2657000 4710800 7383800 10152 1245 9244 86362;86363;86364;86365;86366;86367;86368;86369 69133;69134;69135;69136;69137 69136 3 EAITEAVEAPAAAR Unmodified 1397.7151 0.71505795 3342 Q8N5A5 ZGPAT Zinc finger CCCH-type with G patch domain-containing protein yes yes 0 0 0 By MS/MS 10 0 1 1 53.49 53.905 2 0.011176 60927 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 52.247 40.399 9148600 0 0 0 0 0 0 0 0 0 0 9148600 0 0 0 0 10153 3342 9245 86370 69138 69138 1 EAIVTSEELGQDLEHVEVLQK Unmodified 2365.2013 0.20128517 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.5 2.93 4 1 1 1 3 1 1 89.381 85.479 2;3 3.4499E-218 107160 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 289.61 279.54 446780000 55908000 365840000 14509000 0 0 0 0 0 0 0 0 0 0 0 10526000 10154 2344 9246 86371;86372;86373;86374;86375;86376 69139;69140;69141;69142;69143;69144;69145 69140 7 EAIYNDVLTK Unmodified 1164.6027 0.60265396 1498 P46100 ATRX Transcriptional regulator ATRX yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching 10 0 5 1 1 1 1 1 57.917 58.188 2 0.017094 66376 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 49.16 36.876 30092000 0 0 0 0 0 5605800 4098900 0 0 0 6193800 0 6009100 0 8184300 10155 1498 9247 86377;86378;86379;86380;86381 69146;69147 69146 2 EAIYSGYIR Unmodified 1070.5397 0.53965977 28 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 56.703 56.822 2 0.0099526 64575 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 65.246 46.516 87500000 0 0 0 3773900 4390100 11487000 5777500 0 4188400 9204300 9973700 9635200 6721700 6912300 15436000 10156 28 9248 86382;86383;86384;86385;86386;86387;86388;86389;86390;86391;86392 69148;69149 69148 2 EAKPDELMDSK Unmodified 1261.586 0.58601761 4794 Q9P0L0 VAPA Vesicle-associated membrane protein-associated protein A yes yes 0 0 1 By MS/MS 2.5 0.5 2 2 4 31.294 26.847 2;3 0.0017941 35387 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.42 13.106 114010000 0 114010000 0 0 0 0 0 0 0 0 0 0 0 0 0 10157 4794 9249 86393;86394;86395;86396 69150;69151 69151 0 EALAAEDREAK Unmodified 1201.5939 0.59388018 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 12.868 13.023 2;3 0.001397 12247 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 52.903 35.682 358040000 0 0 0 25781000 23082000 23579000 31163000 29673000 24120000 28019000 29858000 40656000 34979000 25760000 41372000 10158 2556 9250 86397;86398;86399;86400;86401;86402;86403;86404;86405;86406;86407;86408;86409;86410;86411;86412;86413;86414;86415;86416;86417;86418;86419;86420 69152;69153;69154;69155;69156;69157;69158;69159;69160;69161;69162;69163;69164;69165;69166;69167;69168;69169 69152 11 EALAAVLTYAK Unmodified 1148.6441 0.64412484 614 O94979 SEC31A Protein transport protein Sec31A yes yes 0 0 0 By MS/MS By matching By matching By MS/MS 10 0 4 1 1 1 1 77.974 78.145 2 0.010622 89823 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.35 41.783 16843000 0 0 0 0 0 0 0 0 0 4792600 3744900 0 0 2201800 6103300 10159 614 9251 86421;86422;86423;86424 69170 69170 1 EALAEAALESPRPALVR Unmodified 1791.9843 0.98429694 209 O14745 SLC9A3R1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 73.66 73.793 3 1.9538E-27 84482 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 111.43 107.08 115630000 0 0 0 0 3186200 0 5264100 0 0 0 21021000 22364000 0 16418000 47378000 10160 209 9252 86425;86426;86427;86428;86429;86430 69171;69172;69173;69174;69175;69176;69177 69172 6 EALAFIIR Unmodified 931.5491 0.54910224 167 O00541 PES1 Pescadillo homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 8 1 1 1 1 1 1 1 1 80.133 80.265 2 0.012535 92770 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 74.415 51.679 60413000 0 0 0 0 0 9434100 5448500 4139500 7137400 12200000 0 0 8152600 6162400 7738500 10161 167 9253 86431;86432;86433;86434;86435;86436;86437;86438 69178;69179;69180;69181;69182;69183 69179 6 EALCDPTVASR Unmodified 1217.571 0.57103625 4119 Q9BRX2 PELO Protein pelota homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 35.7 35.974 2 0.0015109 39674 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 72.243 50.006 57968000 0 0 0 0 0 6905000 5519100 0 5951100 7773900 9045000 0 8602300 6519400 7652300 10162 4119 9254 86439;86440;86441;86442;86443;86444;86445;86446;86447 69184;69185;69186;69187;69188;69189 69185 6 EALCDPTVASRLSDTK Unmodified 1761.8567 0.85671317 4119 Q9BRX2 PELO Protein pelota homolog yes yes 0 0 1 By MS/MS 2.33 0.471 2 1 3 58.987 53.48 2;3 0.0095407 68723 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 45.723 30.485 74483000 0 74483000 0 0 0 0 0 0 0 0 0 0 0 0 0 10163 4119 9255 86448;86449;86450 69190;69191;69192 69190 2 EALDDVTLPR Unmodified 1127.5823 0.58225287 1006 P14735 IDE Insulin-degrading enzyme yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 1 1 6 2 1 1 1 1 1 1 65.918 64.2 2 0.00099736 74720 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 110.87 63.674 260730000 0 133480000 0 85686000 0 0 0 0 0 0 0 0 9309000 9443500 22812000 10164 1006 9256 86451;86452;86453;86454;86455;86456;86457;86458 69193;69194;69195;69196;69197;69198;69199;69200 69199 8 EALDDVTLPRLK Unmodified 1368.7613 0.76127986 1006 P14735 IDE Insulin-degrading enzyme yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 78.948 73.762 2;3 0.00029324 94577 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.23 63.893 146320000 64442000 72863000 9017600 0 0 0 0 0 0 0 0 0 0 0 0 10165 1006 9257 86459;86460;86461 69201;69202;69203;69204 69203 4 EALDVLGAVLK Unmodified 1126.6598 0.6597749 3622 Q92552 MRPS27 28S ribosomal protein S27, mitochondrial yes yes 0 0 0 By MS/MS 10 0 1 1 88.743 88.832 2 0.035565 103344 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 37.549 18.571 1561700 0 0 0 0 0 0 0 0 0 0 0 0 1561700 0 0 10166 3622 9258 86462 69205 69205 1 EALEALVPVTIEVEVPFDLHR Unmodified 2375.2737 0.27366225 2033 Q00341 HDLBP Vigilin yes yes 0 0 0 By MS/MS 2 0 1 1 99.786 91.656 3 5.942E-05 118161 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.69 58.162 7940500 7940500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10167 2033 9259 86463 69206 69206 1 EALEAYRR Unmodified 1006.5196 0.51959303 4599 Q9NRF9 POLE3 DNA polymerase epsilon subunit 3 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.632 20.835 2 0.048611 20529 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 99.375 75.851 200040000 0 0 0 11996000 9792100 11060000 11839000 16568000 5688200 15233000 31102000 24955000 16935000 15823000 29051000 10168 4599 9260 86464;86465;86466;86467;86468;86469;86470;86471;86472;86473;86474;86475 69207 69207 0 EALEEFYGRK Unmodified 1240.6088 0.60880197 4372 Q9H2P9 DPH5 Diphthine synthase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.18 3.74 6 2 14 2 4 2 1 1 2 1 1 1 1 2 1 1 2 48.902 46.964 2;3 0.0022856 51868 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 63.283 52.975 454170000 35198000 161810000 135650000 3612400 2674200 20198000 4334400 5116200 3782200 14788000 14720000 8457400 0 5996700 37830000 10169 4372 9261 86476;86477;86478;86479;86480;86481;86482;86483;86484;86485;86486;86487;86488;86489;86490;86491;86492;86493;86494;86495;86496;86497 69208;69209;69210;69211;69212;69213;69214;69215;69216;69217;69218;69219;69220;69221;69222;69223;69224 69224 13 EALEHLCTYEK Unmodified 1391.6391 0.63911582 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 2 2 2 2 2 3 1 1 40.807 41.105 2;3 2.3117E-287 45762 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 280.83 236.08 2494500000 0 0 0 0 7266300 0 119820000 172850000 137970000 390890000 677620000 975150000 0 3844600 9104100 10170 4226 9262 86498;86499;86500;86501;86502;86503;86504;86505;86506;86507;86508;86509;86510;86511;86512;86513 69225;69226;69227;69228;69229;69230;69231;69232;69233;69234;69235 69231 6 EALELTDTGLLSGSEER Unmodified 1818.8847 0.88470206 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.204 80.262 2 1.2869E-162 92883 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 262.07 235.96 222530000 0 0 0 7839500 13125000 22605000 10220000 12946000 14514000 23600000 22343000 27743000 14213000 20782000 32603000 10171 2392 9263 86514;86515;86516;86517;86518;86519;86520;86521;86522;86523;86524;86525 69236;69237;69238;69239;69240;69241;69242;69243;69244;69245;69246;69247;69248;69249;69250;69251;69252;69253;69254 69243 19 EALELTDTGLLSGSEERVQVALEELQDLK Unmodified 3184.6351 0.63508288 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 1 By MS/MS By MS/MS 2.4 0.49 3 2 3 2 100.25 94.664 3;4 9.979E-174 119182 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 190.5 170.57 115880000 54658000 61217000 0 0 0 0 0 0 0 0 0 0 0 0 0 10172 2392 9264 86526;86527;86528;86529;86530 69255;69256;69257;69258 69255 4 EALENANTNTEVLK Unmodified 1544.7682 0.76821573 4390 Q9H444 CHMP4B Charged multivesicular body protein 4b yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.615 45.784 2 0 50263 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 261.52 222.77 278790000 0 0 0 14831000 7964500 10448000 15147000 15223000 8119600 18922000 29648000 46950000 18037000 34056000 59440000 10173 4390 9265 86531;86532;86533;86534;86535;86536;86537;86538;86539;86540;86541;86542 69259;69260;69261;69262;69263;69264;69265;69266;69267;69268;69269;69270 69262 12 EALENCITLQDFNR Unmodified 1721.8043 0.80428367 4079 Q9BPX3 NCAPG Condensin complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 77.726 77.862 2 4.2539E-20 89525 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 177.44 127.09 56952000 0 0 0 0 0 7179300 0 0 0 5657000 6176500 12533000 8200900 5919500 11285000 10174 4079 9266 86543;86544;86545;86546;86547;86548;86549;86550 69271;69272;69273;69274;69275;69276;69277 69273 7 EALENCITLQDFNRASELK Unmodified 2250.095 0.095045957 4079 Q9BPX3 NCAPG Condensin complex subunit 3 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 83.175 79.558 3 6.5104E-05 96454 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 68.129 53.201 37992000 0 32535000 5457400 0 0 0 0 0 0 0 0 0 0 0 0 10175 4079 9267 86551;86552 69278;69279 69279 2 EALEPSGENVIQNK Unmodified 1526.7577 0.75765105 506 O75477 ERLIN1 Erlin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 46.714 47.053 2 6.5932E-05 52997 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 84.17 77.93 40778000 0 0 0 0 0 0 4749100 3881900 3365500 4366700 5143100 7780700 4025700 3262300 4203200 10176 506 9268 86553;86554;86555;86556;86557;86558;86559;86560;86561 69280;69281;69282;69283;69284;69285;69286;69287 69284 8 EALEQQR Unmodified 872.43519 0.4351947 3687 Q92922;Q9UL12 SMARCC1;SARDH SWI/SNF complex subunit SMARCC1;Sarcosine dehydrogenase, mitochondrial yes no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 8.6085 8.6356 2 0.023406 6945 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 86.866 27.225 34293000 0 0 0 3394700 3036800 4566000 4723200 0 0 0 18572000 0 0 0 0 10177 3687 9269 86562;86563;86564;86565;86566 69288;69289 69288 2 EALESEFR Unmodified 979.46108 0.4610751 5058 Q9UPT5 EXOC7 Exocyst complex component 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.399 42.577 2 0.019608 46372 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 63.48 41.709 97931000 0 0 0 6154000 4660500 7879300 6991900 6649100 5571600 9344800 9034600 10446000 9194200 8330300 13674000 10178 5058 9270 86567;86568;86569;86570;86571;86572;86573;86574;86575;86576;86577;86578 69290;69291;69292;69293;69294;69295;69296;69297;69298;69299;69300 69297 11 EALESVEVLIK Unmodified 1228.6915 0.69146896 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 85.516 80.4 2 0.0016035 101109 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.653 61.36 49607000 8314300 39134000 2158500 0 0 0 0 0 0 0 0 0 0 0 0 10179 2361 9271 86579;86580;86581 69301;69302 69301 2 EALETDLYK Unmodified 1080.5339 0.53390569 2287 Q13426 XRCC4 DNA repair protein XRCC4 yes yes 0 0 0 By MS/MS By MS/MS 5 3.56 1 1 1 2 1 53.354 48.013 2 0.033862 62038 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.42 31.58 49264000 0 49264000 0 0 0 0 0 0 0 0 0 0 0 0 0 10180 2287 9272 86582;86583;86584 69303;69304 69303 2 EALEVDWSSEK Unmodified 1291.5932 0.59321148 4838 Q9UBE0 SAE1 SUMO-activating enzyme subunit 1;SUMO-activating enzyme subunit 1, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 66.147 59.834 2 2.0158E-08 76904 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 156.83 144.47 350080000 20135000 329940000 0 0 0 0 0 0 0 0 0 0 0 0 0 10181 4838 9273 86585;86586;86587 69305;69306 69305 1 EALGDAQQSVR Unmodified 1172.5786 0.57856447 4035 Q99615 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 0 0 0 By MS/MS 10 0 1 1 25.653 25.663 2 0.0089495 27315 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 61.56 45.898 8833400 0 0 0 0 0 0 8833400 0 0 0 0 0 0 0 0 10182 4035 9274 86588 69307 69307 1 EALGGQALYPHVLVK Unmodified 1593.8879 0.88787736 4162 Q9BUJ2 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.39 3.7 5 1 12 1 3 2 1 1 1 1 1 1 1 1 1 1 1 1 75.285 73.866 2;3 2.8811E-06 90835 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 100.88 90.925 1621100000 685580000 247250000 107740000 19426000 21207000 49494000 40224000 45686000 50825000 47497000 44417000 59439000 47634000 53060000 101620000 10183 4162 9275 86589;86590;86591;86592;86593;86594;86595;86596;86597;86598;86599;86600;86601;86602;86603;86604;86605;86606 69308;69309;69310;69311;69312;69313;69314;69315;69316;69317;69318;69319;69320;69321;69322 69317 15 EALGIPAAASFK Unmodified 1173.6394 0.63937381 1307 P31939 ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 78.759 74.015 2 0.00084028 92976 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.29 89.515 5217300000 79098000 5084300000 53888000 0 0 0 0 0 0 0 0 0 0 0 0 10184 1307 9276 86607;86608;86609;86610 69323;69324;69325;69326;69327;69328;69329 69323 7 EALGLGPPAAQLTPPPAPVGLR Unmodified 2121.1946 0.19462407 3276 Q8IY67 RAVER1 Ribonucleoprotein PTB-binding 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 1 2 2 2 2 2 2 2 2 2 2 2 87.675 87.763 2;3 7.7439E-10 101692 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 65.25 57.353 260810000 0 0 0 2588800 17685000 19639000 16045000 22740000 16240000 25488000 26914000 32235000 12970000 21727000 46540000 10185 3276 9277 86611;86612;86613;86614;86615;86616;86617;86618;86619;86620;86621;86622;86623;86624;86625;86626;86627;86628;86629;86630;86631;86632;86633 69330;69331;69332;69333;69334;69335;69336;69337;69338;69339;69340;69341;69342;69343;69344;69345 69345 16 EALGQAGVSETDNSSQDALGLSK Unmodified 2276.0768 0.076812936 2239 Q13136 PPFIA1 Liprin-alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 62.517 62.612 2;3 3.505E-54 71481 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 142.01 136.83 170280000 0 0 0 8802000 10065000 15582000 10914000 14998000 8360900 13098000 21232000 22837000 14406000 12650000 17333000 10186 2239 9278 86634;86635;86636;86637;86638;86639;86640;86641;86642;86643;86644;86645;86646;86647;86648;86649;86650;86651;86652;86653;86654;86655;86656;86657 69346;69347;69348;69349;69350;69351;69352;69353;69354;69355;69356;69357;69358;69359 69357 14 EALGQNEESPK Unmodified 1200.5622 0.5622457 4457 Q9H8Y5 ANKZF1 Ankyrin repeat and zinc finger domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.147 16.292 2 0.0033501 14991 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.056 46.785 27050000 0 0 0 1464100 2065100 1594000 1814200 1302300 1737700 2172200 3609800 0 2254000 3615700 5420900 10187 4457 9279 86658;86659;86660;86661;86662;86663;86664;86665;86666;86667;86668;86669 69360;69361;69362;69363 69361 4 EALIAASETLK Unmodified 1144.634 0.63395408 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 60.735 58.86 2 4.3531E-05 66963 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 116.3 100.1 1377500000 11746000 1077000000 22478000 0 0 48853000 0 0 0 35087000 41232000 35577000 27949000 30790000 46827000 10188 4634 9280 86670;86671;86672;86673;86674;86675;86676;86677;86678;86679;86680;86681;86682;86683 69364;69365;69366;69367;69368;69369;69370;69371;69372;69373;69374;69375;69376;69377;69378;69379;69380 69365 15 EALIEIDYGDLCEDLK Unmodified 1894.887 0.88701024 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 0 By MS/MS 2 0 1 1 93.502 85.372 2 2.2659E-23 110600 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 124.38 114.59 13305000 13305000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10189 2431 9281 86684 69381 69381 1 EALIQELQHK Unmodified 1207.6561 0.65608651 4621 Q9NS87 KIF15 Kinesin-like protein KIF15 yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 61.693 56.861 3 0.030741 72613 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 42.718 30.555 16386000 0 15838000 548110 0 0 0 0 0 0 0 0 0 0 0 0 10190 4621 9282 86685;86686 69382 69382 1 EALIQQSQEQK Unmodified 1300.6623 0.6622941 3109 Q7Z6B0 CCDC91 Coiled-coil domain-containing protein 91 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 24.847 25.041 2 6.9117E-05 25310 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 138.06 98.914 20206000 0 0 0 0 1286400 1982500 1760400 0 0 3219600 0 3915400 0 0 8041300 10191 3109 9283 86687;86688;86689;86690;86691;86692;86693;86694 69383;69384;69385;69386;69387;69388;69389 69385 7 EALLAQREEEVQQGQQDLEK Unmodified 2340.1557 0.15573196 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.481 58.596 3 3.503E-37 66750 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 108.17 103.62 137750000 0 0 0 5677100 9269900 13903000 10484000 11728000 12337000 10144000 12185000 13647000 8887900 9382200 20107000 10192 2193 9284 86695;86696;86697;86698;86699;86700;86701;86702;86703;86704;86705;86706 69390;69391;69392;69393;69394;69395;69396;69397;69398;69399;69400;69401;69402;69403;69404 69391 15 EALLDESRPLFER Unmodified 1573.81 0.81002097 4158 Q9BU89 DOHH Deoxyhypusine hydroxylase yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 74.068 74.365 3 0.0010255 85186 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.891 43.287 12010000 0 0 0 0 0 0 0 0 0 0 0 3082600 0 0 8926900 10193 4158 9285 86707;86708 69405 69405 1 EALLQASR Unmodified 886.48723 0.48723027 1198 P26038 MSN Moesin yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 30.473 29.782 2 0.0088146 31196 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 84.916 40.799 365860000 2715300 101170000 0 3691400 0 0 2932700 4312200 1424800 5727000 41924000 40355000 7897000 29697000 124020000 10194 1198 9286 86709;86710;86711;86712;86713;86714;86715;86716;86717;86718;86719;86720 69406;69407;69408;69409;69410 69410 4 EALLQASRDQK Unmodified 1257.6677 0.66771383 1198 P26038 MSN Moesin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 6 2 2 4 2 28.343 24.015 2;3 1.7645E-46 30492 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 213.31 140.05 1809700000 286680000 529180000 993810000 0 0 0 0 0 0 0 0 0 0 0 0 10195 1198 9287 86721;86722;86723;86724;86725;86726;86727;86728 69411;69412;69413;69414;69415;69416;69417;69418;69419 69419 6 EALLSSAVDHGSDEVK Unmodified 1655.8002 0.80024414 1980 P78371 CCT2 T-complex protein 1 subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.6 3 1 27 1 3 2 2 2 3 2 2 3 2 2 2 3 2 51.768 51.366 2;3 1.8315E-131 67981 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 228.78 209.16 7974100000 451690 479710000 0 389430000 448930000 659220000 565510000 598180000 301120000 698720000 836560000 619250000 550250000 601400000 1225400000 10196 1980 9288 86729;86730;86731;86732;86733;86734;86735;86736;86737;86738;86739;86740;86741;86742;86743;86744;86745;86746;86747;86748;86749;86750;86751;86752;86753;86754;86755;86756;86757;86758;86759 69420;69421;69422;69423;69424;69425;69426;69427;69428;69429;69430;69431;69432;69433;69434;69435;69436;69437;69438;69439;69440;69441;69442;69443;69444;69445;69446;69447;69448;69449;69450 69429 25 EALLVANGTPR Unmodified 1139.6299 0.62987176 3293 Q8IZ83 ALDH16A1 Aldehyde dehydrogenase family 16 member A1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 48.251 48.699 2 0.0029858 53975 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.157 45.38 10139000 0 0 0 0 0 0 0 3398100 0 0 0 0 0 0 6740600 10197 3293 9289 86760;86761 69451 69451 1 EALMEEILK Unmodified 1074.5631 0.56309733 3495;3843 Q8TD16;Q96G01 BICD2;BICD1 Protein bicaudal D homolog 2;Protein bicaudal D homolog 1 no no 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 84.666 81.048 2 0.014122 100956 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.95 51.517 66339000 0 64922000 1417300 0 0 0 0 0 0 0 0 0 0 0 0 10198 3495;3843 9290 86762;86763 69452 69452 0 EALMTELSTVK Unmodified 1220.6322 0.63223953 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 72.53 71.427 2 3.1966E-05 89974 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.3 107.09 468180000 0 443950000 2773300 0 0 0 0 0 0 2553900 0 4671100 0 3749300 10477000 10199 2495 9291 86764;86765;86766;86767;86768;86769;86770 69453;69454;69455;69456;69457;69458;69459 69455 7 EALMTELSTVK Oxidation (M) 1236.6272 0.62715415 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 1 0 By MS/MS 2.4 0.49 3 2 5 57.098 51.659 2 3.8798E-09 67083 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.66 91.693 91938000 0 91938000 0 0 0 0 0 0 0 0 0 0 0 0 0 10200 2495 9291 86771;86772;86773;86774;86775 69460;69461;69462 69461 4100 3 EALNSLSQLSYSTSSSK Unmodified 1800.8741 0.87413737 4792 Q9P0K7 RAI14 Ankycorbin yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 72.917 67.372 2 1.0104E-08 85237 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 132.59 107.63 29700000 0 29700000 0 0 0 0 0 0 0 0 0 0 0 0 0 10201 4792 9292 86776;86777 69463;69464 69464 2 EALNVINTHTK Unmodified 1238.6619 0.66190017 578 O76094 SRP72 Signal recognition particle subunit SRP72 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.45 2.03 2 27 1 1 3 2 2 3 2 2 2 2 1 2 4 2 36.825 36.597 2;3 1.6593E-43 40249 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 226.09 154.75 938570000 41601000 0 67061000 54931000 45187000 56561000 70144000 86102000 56772000 78567000 69939000 68844000 80195000 65195000 97468000 10202 578 9293 86778;86779;86780;86781;86782;86783;86784;86785;86786;86787;86788;86789;86790;86791;86792;86793;86794;86795;86796;86797;86798;86799;86800;86801;86802;86803;86804;86805;86806 69465;69466;69467;69468;69469;69470;69471;69472;69473;69474;69475;69476;69477;69478;69479;69480;69481;69482;69483;69484;69485 69467 7 EALPDGVNISK Unmodified 1141.5979 0.59790293 4599 Q9NRF9 POLE3 DNA polymerase epsilon subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 2 14 1 1 1 1 2 1 1 1 1 1 2 1 1 1 53.745 53.291 2 0.0019818 60159 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 85.29 62.55 1179700000 0 723090000 1240700 37282000 28604000 44654000 40940000 39344000 22144000 34821000 34351000 57278000 31376000 42755000 41789000 10203 4599 9294 86807;86808;86809;86810;86811;86812;86813;86814;86815;86816;86817;86818;86819;86820;86821;86822 69486;69487;69488;69489;69490;69491;69492;69493;69494;69495;69496;69497;69498;69499;69500;69501;69502;69503;69504 69500 17 EALPDHEDEIPETVR Unmodified 1748.8217 0.82170787 5053 Q9UPP1 PHF8 Histone lysine demethylase PHF8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 54.577 54.533 3 0.01388 62169 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 32.127 28.623 58169000 0 0 0 7838500 5247100 7231800 8094400 8668800 6564500 7985100 0 0 0 6538900 0 10204 5053 9295 86823;86824;86825;86826;86827;86828;86829;86830 69505;69506;69507;69508;69509 69509 5 EALQDVEDENQ Unmodified 1288.5419 0.54190419 1882 P62258 YWHAE 14-3-3 protein epsilon yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.38 4.19 4 5 12 6 2 1 1 1 1 1 1 1 1 1 1 1 1 1 49.56 50.124 1;2;3 1.9991E-58 46411 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 233.09 211.58 2341400000 872360000 72635000 2475900 49684000 40652000 51332000 45517000 38365000 30013000 84555000 240570000 200590000 54924000 130650000 427040000 10205 1882 9296 86831;86832;86833;86834;86835;86836;86837;86838;86839;86840;86841;86842;86843;86844;86845;86846;86847;86848;86849;86850;86851 69510;69511;69512;69513;69514;69515;69516;69517;69518;69519;69520;69521;69522;69523;69524;69525;69526;69527;69528;69529;69530;69531 69525 18 EALQEQLDER Unmodified 1229.5888 0.58879481 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 39.048 39.176 2 0.0063328 44037 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 65.347 28.653 14096000 0 0 0 3738600 0 0 0 0 0 0 0 10358000 0 0 0 10206 2291 9297 86852;86853 69532;69533 69533 2 EALQEQLDERLQELEK Unmodified 1969.9956 0.99564949 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 1 By MS/MS 2 0 1 1 88.413 80.283 3 0.016558 104464 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 37.083 23.136 5946100 5946100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10207 2291 9298 86854 69534 69534 1 EALQLMATYLPK Oxidation (M) 1392.7323 0.73228792 4011 Q99460 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 8.75 2.8 1 1 10 1 1 1 1 1 1 1 1 1 1 1 1 76.304 75.837 2 5.4656E-06 87500 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 109.42 83.86 202150000 0 5784200 4906700 9054700 22115000 23858000 6674800 0 0 33422000 36234000 37737000 5212900 6856800 10294000 10208 4011 9299 86855;86856;86857;86858;86859;86860;86861;86862;86863;86864;86865;86866 69535;69536;69537;69538;69539;69540;69541;69542;69543 69535 5499 9 EALQLMATYLPK Unmodified 1376.7374 0.7373733 4011 Q99460 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 7.33 3.79 1 3 1 10 2 2 1 1 1 1 1 1 1 1 1 1 1 87.271 86.448 2 3.1081E-14 108515 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 135.86 114.4 390560000 6609300 249580000 4142800 0 8284000 10341000 2730800 4541400 3068800 25328000 21795000 28073000 0 5152000 20915000 10209 4011 9299 86867;86868;86869;86870;86871;86872;86873;86874;86875;86876;86877;86878;86879;86880;86881 69544;69545;69546;69547;69548;69549;69550;69551;69552;69553;69554;69555;69556 69547 13 EALQPLINRK Unmodified 1180.6928 0.69280637 3933 Q96N67 DOCK7 Dedicator of cytokinesis protein 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.68 41.857 3 0.0095793 46767 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 35.511 14.641 142780000 0 0 0 8332200 9939000 10374000 11136000 15820000 11383000 13755000 11968000 12802000 13431000 11557000 12284000 10210 3933 9300 86882;86883;86884;86885;86886;86887;86888;86889;86890;86891;86892;86893 69557;69558;69559;69560;69561 69560 5 EALQSLSQR Unmodified 1030.5407 0.5407224 2665 Q32P44 EML3 Echinoderm microtubule-associated protein-like 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 31.777 32.201 2 0.0091747 34533 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 67.494 40.532 41694000 0 0 0 0 0 6551800 0 0 0 0 11313000 6826900 3427100 5040200 8535200 10211 2665 9301 86894;86895;86896;86897;86898;86899 69562;69563;69564 69564 3 EALRAGLNCSTENMPIK Unmodified 1902.9292 0.9291666 804 P05198 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 64.985 58.993 3 0.00036363 76134 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.949 56.035 95117000 23351000 41835000 29931000 0 0 0 0 0 0 0 0 0 0 0 0 10212 804 9302 86900;86901;86902 69565;69566;69567 69565 3 EALRAGLNCSTENMPIK Oxidation (M) 1918.9241 0.92408122 804 P05198 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2 0 4 1 1 2 49.043 43.686 3 5.3993E-07 55206 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 95.662 91.393 60493000 11114000 22890000 26489000 0 0 0 0 0 0 0 0 0 0 0 0 10213 804 9302 86903;86904;86905;86906 69568;69569 69569 964 1 EALSAALRSQNLTK Unmodified 1500.826 0.82600539 3992 Q96SN8 CDK5RAP2 CDK5 regulatory subunit-associated protein 2 yes yes 0 0 1 By MS/MS 2 0 1 1 61.862 53.606 3 0.036691 72550 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 23.481 2.8174 6888200 6888200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10214 3992 9303 86907 69570 69570 1 EALSAQSRDLLK Unmodified 1329.7252 0.72522871 2823 Q5VW36 FOCAD Focadhesin yes yes 0 0 1 By MS/MS 2 0 1 1 50.093 46.177 2 0.019459 58192 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 89.171 62.729 4285500 0 0 4285500 0 0 0 0 0 0 0 0 0 0 0 0 10215 2823 9304 86908 69571 69571 1 EALSPCPSTVSTK Unmodified 1375.6653 0.66533057 2164 Q08AD1 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 37.194 37.28 2 0.0031132 41464 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 55.353 31.83 5217600 0 0 0 0 0 2507600 0 0 0 2709900 0 0 0 0 0 10216 2164 9305 86909;86910;86911;86912 69572;69573;69574;69575 69572 4 EALSSVEAFEK Unmodified 1208.5925 0.5924832 1543 P48553 TRAPPC10 Trafficking protein particle complex subunit 10 yes yes 0 0 0 By MS/MS 2 0 1 1 66.324 60.406 2 0.00032892 77305 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.68 102.36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10217 1543 9306 86913 69576 69576 1 EALSTATVQAAER Unmodified 1345.6838 0.68375782 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.978 44.152 2 4.8885E-20 49441 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 156.48 133.16 311450000 0 0 0 15188000 27259000 19884000 28642000 26519000 20546000 20257000 29766000 40845000 24800000 36109000 21633000 10218 3023 9307 86914;86915;86916;86917;86918;86919;86920;86921;86922;86923;86924;86925 69577;69578;69579;69580;69581;69582;69583;69584;69585 69579 9 EALTYDGALLGDR Unmodified 1392.6885 0.68850885 2490 Q15056 EIF4H Eukaryotic translation initiation factor 4H yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.437 72.507 2 1.2412E-06 82716 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 117.14 91.09 998730000 0 0 0 45546000 39438000 44105000 43927000 61410000 35229000 67561000 121840000 136190000 49575000 96445000 257470000 10219 2490 9308 86926;86927;86928;86929;86930;86931;86932;86933;86934;86935;86936;86937 69586;69587;69588;69589;69590;69591;69592;69593;69594;69595;69596;69597;69598 69589 9 EALVDTLTGILSPVQEVRAAAEEQIK Unmodified 2779.4967 0.49673891 3946 Q96P70 IPO9 Importin-9 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 100.15 93.731 3 1.6377E-12 118131 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.198 73.265 32002000 13981000 18021000 0 0 0 0 0 0 0 0 0 0 0 0 0 10220 3946 9309 86938;86939 69599;69600 69600 2 EALVQVEVSCPK Unmodified 1357.6912 0.69115139 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 0 0 By MS/MS 2 0 1 1 64.877 58.96 2 0.0015343 75532 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.22 81.692 20960000 0 20960000 0 0 0 0 0 0 0 0 0 0 0 0 0 10221 5189 9310 86940 69601 69601 1 EAMEADLK Oxidation (M) 921.41135 0.41134771 5031 Q9UNF1 MAGED2 Melanoma-associated antigen D2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.327 11.5 2 0.02105 9525 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.611 13.384 112780000 0 0 0 0 5769500 9163800 8559000 8526100 6825500 11486000 9237400 14802000 14824000 9326600 14255000 10222 5031 9311 86941;86942;86943;86944;86945;86946;86947;86948;86949;86950;86951 69602;69603 69603 2 EAMEADLK Unmodified 905.41643 0.41643309 5031 Q9UNF1 MAGED2 Melanoma-associated antigen D2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.42 26.62 2 0.0074056 28753 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 89.752 14.563 493020000 0 0 0 26104000 28240000 42771000 38651000 41010000 24415000 53002000 42361000 51010000 49678000 40194000 55588000 10223 5031 9311 86952;86953;86954;86955;86956;86957;86958;86959;86960;86961;86962;86963 69604;69605;69606;69607;69608;69609;69610;69611;69612;69613;69614;69615;69616 69604 13 EAMEDGEIDGNK Oxidation (M) 1322.5296 0.52962495 1085 P19338 NCL Nucleolin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.88 3.69 2 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 25.123 25.164 2 5.9766E-24 99714 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 168 163.39 463040000 38201000 150670000 0 15632000 15946000 14956000 20773000 16780000 16787000 18912000 29393000 33174000 33378000 23536000 34902000 10224 1085 9312 86964;86965;86966;86967;86968;86969;86970;86971;86972;86973;86974;86975;86976;86977;86978;86979 69617;69618;69619;69620;69621;69622;69623;69624;69625;69626;69627;69628;69629;69630;69631;69632 69627 1560 16 EAMEDGEIDGNK Unmodified 1306.5347 0.53471033 1085 P19338 NCL Nucleolin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24.904 24.388 2 2.7686E-10 31482 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 125.97 118.04 509550000 29078000 17999000 0 29016000 22176000 22054000 29348000 27683000 22498000 29644000 36494000 57114000 42042000 36313000 108090000 10225 1085 9312 86980;86981;86982;86983;86984;86985;86986;86987;86988;86989;86990;86991;86992;86993 69633;69634;69635;69636;69637;69638;69639;69640;69641;69642;69643;69644;69645;69646;69647;69648 69640 16 EAMEHPYFYPVVK Oxidation (M) 1624.7596 0.7595653 1094 P19784 CSNK2A2 Casein kinase II subunit alpha' yes yes 0 1 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 72.382 67.963 2;3 0.0019979 82874 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 78.934 57.562 83207000 0 79911000 3296200 0 0 0 0 0 0 0 0 0 0 0 0 10226 1094 9313 86994;86995;86996 69649;69650;69651 69651 1570 3 EAMEHPYFYPVVK Unmodified 1608.7647 0.76465068 1094 P19784 CSNK2A2 Casein kinase II subunit alpha' yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 6.57 3.96 3 4 1 1 1 1 1 1 1 74.59 72.493 3 0.0072686 92735 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 49.423 44.857 147570000 11043000 76584000 39660000 0 0 0 0 3514100 0 0 2366900 0 2750400 0 11652000 10227 1094 9313 86997;86998;86999;87000;87001;87002;87003 69652;69653;69654;69655 69652 4 EAMFSAGMQLPTLDEINK Unmodified 1993.9489 0.94889899 3618 Q92541 RTF1 RNA polymerase-associated protein RTF1 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 94.509 89.613 2 0.0029321 111207 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.889 54.111 14732000 0 14732000 0 0 0 0 0 0 0 0 0 0 0 0 0 10228 3618 9314 87004 69656 69656 1 EAMGIYISTLK Unmodified 1224.6424 0.64241028 661 O95433 AHSA1 Activator of 90 kDa heat shock protein ATPase homolog 1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.121 77.182 2 0.0010106 88166 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 86.624 73.647 101930000 0 0 0 2483400 3265100 10881000 4714700 4874300 5141900 11951000 10032000 7972300 4523900 8566500 27526000 10229 661 9315 87005;87006;87007;87008;87009;87010;87011;87012;87013;87014;87015;87016 69657;69658;69659;69660;69661;69662 69662 3 EAMMMVEPHQK Unmodified 1329.5879 0.58794864 3061 Q7LBC6 KDM3B Lysine-specific demethylase 3B yes yes 0 0 0 By matching By matching By MS/MS By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 38.18 38.462 2 0.00038309 41413 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 104.01 83.112 25460000 0 0 0 0 1542900 0 1611200 3015300 0 0 5226200 6517100 0 0 7547000 10230 3061 9316 87017;87018;87019;87020;87021;87022 69663;69664 69663 2 EAMNDPLLER Oxidation (M) 1202.5601 0.56013721 295 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes yes 0 1 0 By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 41.98 42.158 2 0.0065365 47271 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 56.916 34.176 145600000 0 0 0 9537700 8876400 11497000 9299800 0 7111500 12304000 19449000 19571000 14876000 13332000 19750000 10231 295 9317 87023;87024;87025;87026;87027;87028;87029;87030;87031;87032;87033 69665;69666;69667 69665 376 2 EAMNDPLLER Unmodified 1186.5652 0.56522259 295 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 56.187 56.394 2 0.0065358 65367 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 64.654 44.867 100780000 0 0 0 4987200 0 0 7672300 7426000 0 0 14771000 14693000 9282500 13051000 28899000 10232 295 9317 87034;87035;87036;87037;87038;87039;87040;87041 69668;69669;69670;69671;69672;69673;69674 69674 7 EAMNHPGHLK Oxidation (M) 1148.5397 0.53967654 722 P00374 DHFR Dihydrofolate reductase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 2 3 2 6.4498 3.4288 2;3 9.0454E-11 5450 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 171.99 129.88 1086600000 619200000 96221000 371220000 0 0 0 0 0 0 0 0 0 0 0 0 10233 722 9318 87042;87043;87044;87045;87046;87047;87048 69675;69676;69677 69677 869 3 EAMNHPGHLK Unmodified 1132.5448 0.54476192 722 P00374 DHFR Dihydrofolate reductase yes yes 0 0 0 By MS/MS By matching By MS/MS 2 0 3 1 1 1 12.824 9.6396 2 8.3695E-11 14977 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 165.26 109.76 146540000 126930000 13051000 6558200 0 0 0 0 0 0 0 0 0 0 0 0 10234 722 9318 87049;87050;87051 69678 69678 1 EAMNSICQTALSADGK Unmodified 1694.7604 0.76036994 2835 Q5W0B1 RNF219 RING finger protein 219 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 62.8 56.907 2 2.271E-10 73039 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.17 97.478 13567000 0 13567000 0 0 0 0 0 0 0 0 0 0 0 0 0 10235 2835 9319 87052;87053 69679;69680 69679 2 EAMVESIEYR Unmodified 1225.5649 0.56488824 1522 P47712 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 53.99 54.128 2 0.0015079 61237 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 90.629 74.967 116070000 0 0 0 5198900 8285000 8948200 9190400 11601000 5952100 9687000 11365000 10330000 9812500 9971400 15724000 10236 1522 9320 87054;87055;87056;87057;87058;87059;87060;87061;87062;87063;87064;87065 69681;69682;69683;69684;69685;69686;69687;69688;69689;69690;69691;69692;69693 69681 13 EAMVESIEYRR Unmodified 1381.666 0.66599927 1522 P47712 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 45.57 45.97 3 0.00016284 51644 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 83.045 72.993 122630000 0 0 0 0 0 0 0 26106000 0 0 32541000 0 0 16142000 47844000 10237 1522 9321 87066;87067;87068;87069;87070;87071;87072 69694;69695;69696;69697;69698;69699;69700 69697 7 EAMVESIEYRR Oxidation (M) 1397.6609 0.66091389 1522 P47712 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 33.765 33.959 3 0.023566 37507 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 48.741 37.208 95993000 0 0 0 0 8126900 9513900 9402800 11420000 6817300 0 24438000 0 9896700 6695800 9681300 10238 1522 9321 87073;87074;87075;87076;87077;87078;87079;87080;87081 69701 69701 0 EAMVMANNVYK Unmodified 1268.5893 0.58932885 4944 Q9UJX3 ANAPC7 Anaphase-promoting complex subunit 7 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 49.533 50.043 2 0.025628 55499 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.796 28.467 23612000 0 0 0 0 0 0 0 0 0 0 0 0 11819000 0 11793000 10239 4944 9322 87082;87083 69702 69702 1 EANAFEEQLLK Unmodified 1290.6456 0.6455814 354 O43683 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 71.894 71.96 2 0.0051903 82676 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 59.645 39.869 42890000 0 0 0 2725700 2312300 3470200 2861200 4017200 3114000 4738600 4549200 4835100 0 2818700 7447900 10240 354 9323 87084;87085;87086;87087;87088;87089;87090;87091;87092;87093;87094 69703;69704;69705 69705 3 EANANGSSPEPVK Unmodified 1298.6103 0.61025853 2667 Q3KQU3 MAP7D1 MAP7 domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.581 13.743 2 0.0003836 12482 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.706 64.054 37280000 0 0 0 2361800 2706800 3936700 1795600 1695900 2730600 2801000 3551000 3721300 5305100 2758800 3915100 10241 2667 9324 87095;87096;87097;87098;87099;87100;87101;87102;87103;87104;87105;87106 69706;69707;69708;69709;69710;69711;69712;69713;69714;69715 69708 10 EANDSDVQPSGAQR Unmodified 1472.6492 0.64916323 681 O95707 POP4 Ribonuclease P protein subunit p29 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 12.875 13.036 2 0.00052232 12299 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 68.069 53.378 34023000 0 0 0 0 2732500 3575300 2786800 2788900 2774100 4245300 3109700 0 3438900 2656000 5915800 10242 681 9325 87107;87108;87109;87110;87111;87112;87113;87114;87115;87116 69716;69717;69718;69719;69720;69721;69722 69717 7 EANEILQR Unmodified 971.50361 0.50360861 964;1114 P12268;P20839 IMPDH2;IMPDH1 Inosine-5'-monophosphate dehydrogenase 2;Inosine-5'-monophosphate dehydrogenase 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.86 3.4 1 1 5 2 1 1 1 1 1 29.423 28.168 2 0.0025602 35688 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 149.4 69.172 1120900000 0 237840000 0 0 0 75334000 0 0 0 0 0 118500000 613170000 76088000 0 10243 964;1114 9326 87117;87118;87119;87120;87121;87122;87123 69723;69724;69725;69726;69727;69728;69729;69730;69731 69724 8 EANEILQRSK Unmodified 1186.6306 0.63060004 964;1114 P12268;P20839 IMPDH2;IMPDH1 Inosine-5'-monophosphate dehydrogenase 2;Inosine-5'-monophosphate dehydrogenase 1 no no 0 0 1 By MS/MS By MS/MS 2.33 0.471 4 2 4 2 24.827 21.075 2;3 1.0409E-22 28077 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 212.03 169.16 381290000 0 206020000 175270000 0 0 0 0 0 0 0 0 0 0 0 0 10244 964;1114 9327 87124;87125;87126;87127;87128;87129 69732;69733;69734;69735;69736 69732 3 EANELQQWINEK Unmodified 1500.7209 0.72087161 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 2 1 1 1 1 1 1 75.821 75.977 2 3.1177E-15 87168 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 157.38 120.95 86293000 0 0 0 0 0 9317000 6083300 3923700 0 7938400 11061000 11928000 8987000 6991300 20064000 10245 2344 9328 87130;87131;87132;87133;87134;87135;87136;87137;87138;87139;87140 69737;69738;69739;69740;69741;69742;69743;69744;69745;69746;69747;69748;69749;69750 69743 14 EANFLAEEMSK Unmodified 1267.5755 0.57545293 4350 Q9H1H9 KIF13A Kinesin-like protein KIF13A yes yes 0 0 0 By MS/MS 10 0 1 1 65.8 66.119 2 0.031908 75766 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 53.597 40.018 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10246 4350 9329 87141 69751 69751 1 EANFTVSSMHGDMPQK Unmodified 1777.7764 0.77635436 1400 P38919 EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 51.323 51.425 3 0.00082599 58271 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 38.227 33.426 71064000 0 0 0 0 6521600 0 8620700 16456000 0 0 0 0 0 0 39467000 10247 1400 9330 87142;87143;87144;87145;87146 69752;69753;69754 69753 3 EANIQAVDSEVGLTK Unmodified 1572.7995 0.79951586 4365 Q9H2G2 SLK STE20-like serine/threonine-protein kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 65.29 63.81 2;3 4.8822E-27 73438 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 133.32 109.72 503410000 8766900 301520000 0 9531200 9671500 19732000 11298000 10802000 9202400 18545000 19740000 26710000 9354100 19100000 29437000 10248 4365 9331 87147;87148;87149;87150;87151;87152;87153;87154;87155;87156;87157;87158;87159;87160;87161;87162 69755;69756;69757;69758;69759;69760;69761;69762;69763;69764;69765;69766;69767;69768;69769;69770;69771;69772 69757 17 EANIRVVSEDFLQDVSASTK Unmodified 2207.107 0.10699085 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.22 0.416 7 2 3 5 1 92.509 87.506 2;3 3.233E-36 109570 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 149.09 136.46 588970000 335310000 248980000 4674900 0 0 0 0 0 0 0 0 0 0 0 0 10249 894 9332 87163;87164;87165;87166;87167;87168;87169;87170;87171 69773;69774;69775;69776;69777;69778;69779;69780;69781;69782;69783 69775 10 EANLLNAVIVQR Unmodified 1338.7619 0.76194857 5046 Q9UNZ2 NSFL1C NSFL1 cofactor p47 yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 81.01 81.156 2 2.8128E-05 93918 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 128 113.33 71177000 0 0 0 0 0 0 3052600 0 0 5869200 14005000 11046000 2831600 7764400 26608000 10250 5046 9333 87172;87173;87174;87175;87176;87177;87178 69784;69785;69786 69786 2 EANLLNAVIVQRLT Unmodified 1552.8937 0.89369102 5046 Q9UNZ2 NSFL1C NSFL1 cofactor p47 yes yes 0 0 1 By MS/MS 2 0 1 1 96.489 88.359 2 2.4871E-13 114108 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 160.22 136.47 29215000 29215000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10251 5046 9334 87179 69787 69787 0 EANLQQNEEK Unmodified 1201.5575 0.55749468 4736 Q9NY27 PPP4R2 Serine/threonine-protein phosphatase 4 regulatory subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 9.3256 9.4799 2 0.00052182 6745 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 137.13 114.64 41940000 0 0 0 3160500 3225700 0 0 1783300 1781800 2326000 7476600 11097000 4406500 0 6682900 10252 4736 9335 87180;87181;87182;87183;87184;87185;87186;87187;87188;87189;87190 69788;69789;69790;69791;69792;69793;69794;69795;69796 69792 9 EANMPLPGYK Oxidation (M) 1134.5379 0.53794521 986 P13797 PLS3 Plastin-3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.1 2.7 1 9 1 1 1 1 1 1 1 1 1 1 34.516 34.561 2 0.0065759 37909 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 56.81 37.107 144080000 0 0 0 13362000 7763400 15564000 12986000 13954000 8714500 15436000 40735000 0 0 15567000 0 10253 986 9336 87191;87192;87193;87194;87195;87196;87197;87198;87199;87200 69797;69798;69799;69800;69801;69802 69801 1333 5 EANMPLPGYK Unmodified 1118.543 0.54303059 986 P13797 PLS3 Plastin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 54.734 52.98 2 5.3847E-05 68191 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.98 116.75 2442200000 24469000 2027400000 5113700 29210000 0 36854000 0 0 15930000 48015000 55197000 34345000 0 38335000 127340000 10254 986 9336 87201;87202;87203;87204;87205;87206;87207;87208;87209;87210;87211;87212;87213 69803;69804;69805;69806;69807;69808;69809;69810;69811;69812;69813;69814;69815;69816;69817;69818 69807 16 EANNFLWPFK Unmodified 1264.6241 0.6240581 1072 P18124 RPL7 60S ribosomal protein L7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90.399 89.936 2 0.010763 112637 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.931 55.491 77871000 0 20139000 788060 885710 1298500 3517400 1682300 3779500 3059700 5335500 4209300 4692700 2529200 4950800 21003000 10255 1072 9337 87214;87215;87216;87217;87218;87219;87220;87221;87222;87223;87224;87225;87226;87227 69819;69820;69821;69822;69823;69824;69825;69826 69821 8 EANPAVPEVENQPPAGSNPGPESEGSGVPPRPEEADETWDSK Unmodified 4352.9582 0.95816095 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.74 2.87 4 1 26 2 3 2 2 2 2 2 3 2 2 2 3 2 2 72.523 71.621 3;4 1.3682E-112 83173 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 104.87 103.65 717080000 34520000 145870000 0 19802000 33520000 45484000 29737000 41304000 43840000 49696000 53229000 71989000 45508000 43164000 59416000 10256 2102 9338 87228;87229;87230;87231;87232;87233;87234;87235;87236;87237;87238;87239;87240;87241;87242;87243;87244;87245;87246;87247;87248;87249;87250;87251;87252;87253;87254;87255;87256;87257;87258 69827;69828;69829;69830;69831;69832;69833;69834;69835;69836;69837;69838;69839;69840;69841;69842;69843;69844;69845;69846;69847;69848;69849;69850;69851;69852;69853;69854;69855;69856;69857;69858;69859;69860;69861;69862;69863;69864;69865;69866;69867;69868;69869;69870 69832 43 EANQAINPK Unmodified 983.50361 0.50360861 1062 P17844 DDX5 Probable ATP-dependent RNA helicase DDX5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 3 2 1 1 1 1 10.517 10.688 2 0.0052447 9549 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 79.116 54.442 45976000 0 0 0 0 0 2708500 1378600 0 2381100 0 21133000 18374000 0 0 0 10257 1062 9339 87259;87260;87261;87262;87263;87264;87265;87266;87267;87268 69871;69872;69873;69874;69875;69876;69877;69878 69877 7 EANQQQQFNR Unmodified 1261.58 0.57996145 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.257 12.406 2 0.00054767 11549 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 128.1 108.83 26972000 0 0 0 1411700 1000600 2251300 1228700 1313700 1008500 2842400 3428200 4769800 2144900 2050600 3521600 10258 2344 9340 87269;87270;87271;87272;87273;87274;87275;87276;87277;87278;87279;87280 69879;69880;69881;69882;69883;69884;69885 69879 7 EANVYPAECR Unmodified 1207.5292 0.52917144 4479 Q9H9Y6 POLR1B DNA-directed RNA polymerase I subunit RPA2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 26.101 26.601 2 0.030285 27385 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.083 30.256 3415800 0 0 0 0 0 0 0 0 0 0 0 0 0 1686700 1729000 10259 4479 9341 87281;87282 69886 69886 1 EAPAEGEAAEPGSPTAAEGEAASAASSTSSPK Unmodified 2914.2952 0.29519815 1256 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.18 2 3 24 3 1 1 2 2 2 2 2 2 2 2 2 2 2 2 58.258 58.112 2;3;4 5.2972E-199 91757 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 193.23 190.62 3232900000 394570000 29855000 3821500 136940000 142040000 111980000 186910000 148330000 159630000 299990000 577540000 422110000 154580000 199890000 264720000 10260 1256 9342 87283;87284;87285;87286;87287;87288;87289;87290;87291;87292;87293;87294;87295;87296;87297;87298;87299;87300;87301;87302;87303;87304;87305;87306;87307;87308;87309;87310;87311 69887;69888;69889;69890;69891;69892;69893;69894;69895;69896;69897;69898;69899;69900;69901;69902;69903;69904;69905;69906;69907;69908;69909;69910;69911;69912;69913;69914;69915;69916;69917;69918 69900 31 EAPAGALAAVLK Unmodified 1109.6445 0.64445919 1569 P49366 DHPS Deoxyhypusine synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 78.517 78.674 2 0.010482 91243 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 46.462 38.522 67917000 0 0 0 0 0 0 0 3254700 0 4542900 14827000 7498000 5633800 8341700 23819000 10261 1569 9343 87312;87313;87314;87315;87316;87317;87318 69919;69920;69921;69922;69923 69922 5 EAPAQPAPEK Unmodified 1036.5189 0.51892433 2534 Q15428 SF3A2 Splicing factor 3A subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.34 1 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 18.516 18.495 2 0.0015063 10239 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 90.64 66.442 529170000 100630000 21402000 0 21869000 27232000 29555000 33386000 27069000 26365000 33118000 21922000 44591000 32758000 47240000 62034000 10262 2534 9344 87319;87320;87321;87322;87323;87324;87325;87326;87327;87328;87329;87330;87331;87332;87333 69924;69925;69926;69927;69928;69929;69930;69931;69932;69933 69930 10 EAPASVVPFVR Unmodified 1170.6397 0.63970816 2702 Q53GS9 USP39 U4/U6.U5 tri-snRNP-associated protein 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 74.498 74.442 2 0.00033528 85733 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 88.819 66.688 54227000 0 0 0 13796000 0 0 0 23382000 17049000 0 0 0 0 0 0 10263 2702 9345 87334;87335;87336;87337;87338;87339;87340;87341 69934;69935;69936;69937;69938;69939;69940;69941;69942 69940 9 EAPATQASSTTQLTDTQVLAAENK Unmodified 2474.2136 0.21364077 5031 Q9UNF1 MAGED2 Melanoma-associated antigen D2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 1 2 1 2 2 2 2 2 2 2 2 65.666 65.777 2;3 2.9742E-87 75226 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 154.1 146.65 2241900000 0 0 0 122610000 113350000 182990000 26738000 174440000 134220000 238540000 239240000 273270000 237680000 210880000 287980000 10264 5031 9346 87342;87343;87344;87345;87346;87347;87348;87349;87350;87351;87352;87353;87354;87355;87356;87357;87358;87359;87360;87361;87362;87363 69943;69944;69945;69946;69947;69948;69949;69950;69951;69952;69953;69954;69955;69956;69957;69958;69959;69960 69958 18 EAPCVLIYIPDGHTK Unmodified 1711.8603 0.86034198 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 1 1 1 1 1 1 1 1 1 1 1 1 1 79.677 79.311 3 0.00062429 91652 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.209 52.033 223810000 0 44215000 30394000 3860700 0 13368000 6927600 15170000 11264000 10870000 16044000 15680000 8734500 13924000 33362000 10265 848 9347 87364;87365;87366;87367;87368;87369;87370;87371;87372;87373;87374;87375;87376 69961;69962;69963;69964;69965;69966;69967;69968;69969;69970 69970 10 EAPEPGMEVVK Oxidation (M) 1200.5696 0.56963927 248 O15067 PFAS Phosphoribosylformylglycinamidine synthase yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 33.263 27.88 2 0.030179 36722 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 51.415 32.144 55127000 13614000 41513000 0 0 0 0 0 0 0 0 0 0 0 0 0 10266 248 9348 87377;87378 69971 69971 1 EAPEPGMEVVK Unmodified 1184.5747 0.57472465 248 O15067 PFAS Phosphoribosylformylglycinamidine synthase yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 49.14 42.366 2 0.0030537 55596 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.647 66.871 271620000 20987000 250640000 0 0 0 0 0 0 0 0 0 0 0 0 0 10267 248 9348 87379;87380 69972;69973 69972 2 EAPGPAGGGGGGSR Unmodified 1125.5163 0.51629857 4087 Q9BQ61 C19orf43 Uncharacterized protein C19orf43 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.2117 7.3353 2 5.5475E-08 5487 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 95.362 86.499 242590000 0 0 0 15559000 15365000 19595000 18496000 16022000 18085000 12793000 33847000 24489000 18097000 16417000 33822000 10268 4087 9349 87381;87382;87383;87384;87385;87386;87387;87388;87389;87390;87391;87392 69974;69975;69976;69977;69978;69979;69980;69981;69982;69983;69984;69985 69979 12 EAPGPNGATEEDGVPSK Unmodified 1653.7482 0.74820857 1577 P49585 PCYT1A Choline-phosphate cytidylyltransferase A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.179 30.371 2 1.1568E-41 32941 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 150.21 136.31 400330000 0 0 0 23987000 23385000 23083000 26667000 28784000 21597000 36178000 35467000 56374000 37051000 40756000 47006000 10269 1577 9350 87393;87394;87395;87396;87397;87398;87399;87400;87401;87402;87403;87404 69986;69987;69988;69989;69990;69991;69992;69993;69994;69995;69996;69997 69988 12 EAPLPFILLGGSEK Unmodified 1469.813 0.81298108 5202 Q9Y4G8 RAPGEF2 Rap guanine nucleotide exchange factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 94.779 94.9 2 0.0054375 110167 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.299 28.728 7612300 0 0 0 0 0 1124100 819340 0 1067300 1763000 0 0 0 1105800 1732800 10270 5202 9351 87405;87406;87407;87408;87409;87410 69998;69999 69999 2 EAPNPIHLTVDTSLQNGR Unmodified 1960.9967 0.99665254 141 O00303 EIF3F Eukaryotic translation initiation factor 3 subunit F yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 71.75 71.877 3 7.2337E-05 82696 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 62.765 55.192 130580000 0 0 0 0 7091800 14626000 5434000 7693800 6368300 18790000 11875000 14298000 7233000 13462000 23707000 10271 141 9352 87411;87412;87413;87414;87415;87416;87417;87418;87419;87420;87421 70000;70001;70002;70003;70004;70005;70006;70007 70003 8 EAPPMEKPEVVK Unmodified 1352.701 0.70098779 1915 P62841 RPS15 40S ribosomal protein S15 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.43 3.14 5 1 24 2 3 1 2 2 2 2 2 2 2 2 2 2 2 2 37.869 36.943 2;3 0.00039156 48185 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.85 102.6 3659400000 53275000 1630200000 16969000 93248000 104640000 119390000 94365000 101130000 77002000 191340000 167770000 238500000 240800000 204100000 326650000 10272 1915 9353 87422;87423;87424;87425;87426;87427;87428;87429;87430;87431;87432;87433;87434;87435;87436;87437;87438;87439;87440;87441;87442;87443;87444;87445;87446;87447;87448;87449;87450;87451 70008;70009;70010;70011;70012;70013;70014;70015;70016;70017;70018;70019;70020;70021;70022;70023;70024;70025;70026;70027;70028;70029 70012 10 EAPPMEKPEVVK Oxidation (M) 1368.6959 0.69590241 1915 P62841 RPS15 40S ribosomal protein S15 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 4 2 12 1 4 1 1 1 2 1 1 2 1 1 2 26.375 25.12 2;3 0.002001 27157 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 53.034 46.336 1183000000 21347000 564440000 10701000 42253000 0 39028000 68139000 24776000 0 45177000 0 122300000 63896000 48626000 132350000 10273 1915 9353 87452;87453;87454;87455;87456;87457;87458;87459;87460;87461;87462;87463;87464;87465;87466;87467;87468;87469 70030;70031;70032;70033;70034;70035;70036;70037;70038;70039;70040 70038 3095 8 EAPPPVLLTPK Unmodified 1160.6805 0.68051035 1546 P48634 PRRC2A Protein PRRC2A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 65.981 65.938 2 0.0061716 76024 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 72.325 57.46 97459000 0 0 0 12167000 12829000 0 0 0 13610000 0 0 24788000 17137000 16928000 0 10274 1546 9354 87470;87471;87472;87473;87474;87475 70041;70042;70043;70044;70045 70045 5 EAPSPTCPDLGAK Unmodified 1341.6235 0.62346575 134 O00257 CBX4 E3 SUMO-protein ligase CBX4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.814 38.994 2 0.0057568 42795 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.442 37.918 87334000 0 0 0 4061000 6372400 6746900 4787400 5145800 5590200 8947600 9612600 11672000 8040900 7207700 9149400 10275 134 9355 87476;87477;87478;87479;87480;87481;87482;87483;87484;87485;87486;87487 70046;70047;70048;70049;70050;70051;70052;70053;70054;70055;70056;70057 70055 11 EAPVDVLTQIGR Unmodified 1296.7038 0.70376498 4186 Q9BVC6 TMEM109 Transmembrane protein 109 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.024 81.084 2 0.0031742 94070 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 74.841 54.512 101040000 0 0 0 9467800 7539900 6174000 8527200 8500800 4581400 9756300 10300000 17782000 7081600 4925900 6408200 10276 4186 9356 87488;87489;87490;87491;87492;87493;87494;87495;87496;87497;87498;87499 70058;70059;70060;70061;70062;70063;70064 70061 7 EAQAQHNNSEFTEEQK Unmodified 1888.8187 0.81874776 3758 Q96BJ3 AIDA Axin interactor, dorsalization-associated protein yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 18.897 15.297 3 0.014013 18934 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 20.252 16.591 38991000 0 38991000 0 0 0 0 0 0 0 0 0 0 0 0 0 10277 3758 9357 87500;87501 70065 70065 1 EAQAVPATLPELEATK Unmodified 1666.8778 0.87776618 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.265 75.324 2 0.00043513 87150 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 80.469 65.267 191770000 0 0 0 21481000 13552000 13556000 17647000 14498000 11907000 15803000 15877000 20893000 15680000 11804000 19078000 10278 2501 9358 87502;87503;87504;87505;87506;87507;87508;87509;87510;87511;87512;87513 70066;70067;70068;70069;70070;70071;70072;70073;70074;70075 70072 10 EAQDAPGLDPQGAADCAQGVLR Unmodified 2238.0335 0.033508333 1406 P39880 CUX1 Homeobox protein cut-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 2 2 1 73.422 73.478 2;3 8.5429E-07 84278 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.444 48.235 129640000 0 0 0 4816100 8365600 0 10228000 15123000 10344000 13849000 0 20757000 10160000 18339000 17655000 10279 1406 9359 87514;87515;87516;87517;87518;87519;87520;87521;87522;87523;87524;87525 70076;70077;70078;70079;70080;70081;70082;70083;70084;70085;70086;70087;70088;70089 70080 13 EAQDDLVK Unmodified 916.45018 0.45017606 1017 P15311 EZR Ezrin yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 19.487 18.612 2 0.017693 18059 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 65.252 31.514 267450000 85842000 41888000 3907700 0 0 6318400 6989500 6877400 5617500 10531000 0 0 8492200 22641000 68348000 10280 1017 9360 87526;87527;87528;87529;87530;87531;87532;87533;87534;87535;87536 70090;70091;70092;70093;70094 70093 4 EAQDMLNHSEK Unmodified 1300.5718 0.57176453 2296 Q13464 ROCK1 Rho-associated protein kinase 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 21.737 17.874 2 4.2346E-05 23585 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.97 99.818 17186000 0 17186000 0 0 0 0 0 0 0 0 0 0 0 0 0 10281 2296 9361 87537;87538 70095 70095 1 EAQEEIAFLK Unmodified 1176.6027 0.60265396 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 7 3.69 1 1 3 2 1 1 1 70.795 69.112 2 0.016602 87771 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.438 39.009 65476000 0 39563000 0 0 0 0 0 0 6745700 0 0 10348000 8818600 0 0 10282 2446 9362 87539;87540;87541;87542;87543 70096;70097;70098;70099 70096 4 EAQELSQNSAIK Unmodified 1316.6572 0.65720872 4588 Q9NR30 DDX21 Nucleolar RNA helicase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.054 28.249 2 1.4069E-05 30326 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 127.76 64.2 116920000 0 0 0 4288900 7444300 7511700 6156600 7068500 6933900 12514000 14440000 13916000 10559000 10171000 15921000 10283 4588 9363 87544;87545;87546;87547;87548;87549;87550;87551;87552;87553;87554;87555 70100;70101;70102;70103;70104;70105;70106;70107;70108 70106 8 EAQERLTGDAFRK Unmodified 1519.7743 0.77430417 704 O95881 TXNDC12 Thioredoxin domain-containing protein 12 yes yes 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 35.678 30.776 3 0.013962 43039 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.952 54.815 94043000 88245000 0 5797600 0 0 0 0 0 0 0 0 0 0 0 0 10284 704 9364 87556;87557 70109 70109 0 EAQISSAIVSSVQSK Unmodified 1532.8046 0.80460124 2200 Q12872 SFSWAP Splicing factor, suppressor of white-apricot homolog yes yes 0 0 0 By MS/MS By MS/MS 5 3.56 1 1 1 2 1 68.248 62.956 2 0.0031672 80324 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 61.212 27.346 34356000 0 34356000 0 0 0 0 0 0 0 0 0 0 0 0 0 10285 2200 9365 87558;87559;87560 70110;70111 70110 2 EAQLAALQYEEEK Unmodified 1520.7359 0.73585297 3877 Q96II8 LRCH3 Leucine-rich repeat and calponin homology domain-containing protein 3 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 60.306 60.481 2 0.00064246 69017 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 78.692 52.573 65667000 0 0 0 0 4940500 5846800 4450800 7247700 3877400 7121700 7370600 9493900 5772800 0 9544600 10286 3877 9366 87561;87562;87563;87564;87565;87566;87567;87568;87569;87570 70112;70113;70114;70115;70116;70117;70118 70112 6 EAQLYAAQAHLK Unmodified 1341.7041 0.70409934 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.03 3.42 1 5 2 24 3 3 2 2 2 2 2 2 2 2 2 2 2 2 2 45.334 44.415 2;3 3.1002E-14 95066 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 134.51 74.166 2716600000 563450000 354790000 669770000 26660000 47526000 53234000 63667000 36792000 48028000 97307000 176430000 150690000 65777000 95473000 266990000 10287 1564 9367 87571;87572;87573;87574;87575;87576;87577;87578;87579;87580;87581;87582;87583;87584;87585;87586;87587;87588;87589;87590;87591;87592;87593;87594;87595;87596;87597;87598;87599;87600;87601;87602 70119;70120;70121;70122;70123;70124;70125;70126;70127;70128;70129;70130;70131;70132;70133;70134;70135;70136;70137;70138;70139;70140 70126 21 EAQPPAPIEVWTDLAEK Unmodified 1892.952 0.95199376 2299 Q13487 SNAPC2 snRNA-activating protein complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 92.676 92.804 2 0.0077479 107573 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.847 28.743 3500900 0 0 0 0 0 0 0 0 0 1598900 0 0 0 0 1902100 10288 2299 9368 87603;87604 70141 70141 1 EAQQQQHLYR Unmodified 1299.632 0.63199703 3662 Q92793 CREBBP CREB-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 2 1 1 2 12.91 13.102 2;3 0.0044639 12238 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 54.608 45.175 128170000 0 0 0 11205000 6833800 10850000 8816300 5588200 0 14285000 12013000 16502000 13273000 9239300 19568000 10289 3662 9369 87605;87606;87607;87608;87609;87610;87611;87612;87613;87614;87615;87616;87617 70142;70143;70144;70145;70146;70147;70148;70149;70150;70151;70152;70153 70152 10 EAQQVYGGK Unmodified 978.47706 0.47705951 4441 Q9H7Z7 PTGES2 Prostaglandin E synthase 2;Prostaglandin E synthase 2 truncated form yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 2 2 2 2 2 1 2 1 2 2 1 10.12 10.216 2 0.0098039 8750 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.676 38.88 49538000 0 0 0 4267600 3789700 5026400 6426300 5957000 1835900 5192300 2655000 0 6208700 4507200 3671400 10290 4441 9370 87618;87619;87620;87621;87622;87623;87624;87625;87626;87627;87628;87629;87630;87631;87632;87633;87634;87635;87636 70154;70155;70156;70157;70158;70159;70160;70161 70155 8 EAQRFFAQK Unmodified 1123.5774 0.57744226 343 O43583 DENR Density-regulated protein yes yes 0 0 1 By MS/MS 2 0 1 1 35.773 29.425 2 0.031974 41338 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 167.23 167.23 94633000 94633000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10291 343 9371 87637 70162 70162 0 EAQRIAESNHIK Unmodified 1394.7266 0.72662569 356 O43707 ACTN4 Alpha-actinin-4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.11 0.567 1 6 2 4 2 3 26.863 24.447 2;3 5.3192E-07 19509 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 113.61 105.22 6267100000 5021100000 413900000 832050000 0 0 0 0 0 0 0 0 0 0 0 0 10292 356 9372 87638;87639;87640;87641;87642;87643;87644;87645;87646 70163;70164;70165;70166;70167;70168;70169;70170;70171;70172;70173;70174 70169 10 EAQSFISAAIEPESGK Unmodified 1662.8101 0.81008055 3583 Q8WXA9 SREK1 Splicing regulatory glutamine/lysine-rich protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 2 2 2 2 2 2 1 2 2 2 2 74.362 74.444 2;3 3.3168E-27 85717 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 125.03 114.11 227360000 0 0 0 7039600 16515000 13109000 18277000 17558000 18516000 26536000 17975000 30096000 16541000 20103000 25095000 10293 3583 9373 87647;87648;87649;87650;87651;87652;87653;87654;87655;87656;87657;87658;87659;87660;87661;87662;87663;87664;87665;87666;87667;87668 70175;70176;70177;70178;70179;70180;70181;70182;70183;70184;70185;70186;70187;70188 70183 14 EAQSLISAAIEPDK Unmodified 1470.7566 0.75658842 2115 Q05519 SRSF11 Serine/arginine-rich splicing factor 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.117 72.188 2 7.3509E-08 83131 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 112.43 102.77 110950000 0 0 0 3582000 3205300 13595000 5546100 6572900 14431000 10469000 10719000 11765000 7647500 11581000 11833000 10294 2115 9374 87669;87670;87671;87672;87673;87674;87675;87676;87677;87678;87679;87680 70189;70190;70191;70192;70193;70194;70195;70196;70197;70198;70199;70200 70190 12 EAQSLISAAIEPDKK Unmodified 1598.8516 0.85155143 2115 Q05519 SRSF11 Serine/arginine-rich splicing factor 11 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 62.691 62.858 3 0.0077847 71061 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 31.42 25.76 97576000 0 0 0 0 5837700 10119000 6004800 8609600 6040800 9459400 9520600 9398500 11561000 10303000 10722000 10295 2115 9375 87681;87682;87683;87684;87685;87686;87687;87688;87689;87690;87691 70201;70202;70203 70202 3 EAQSQLIK Unmodified 915.50255 0.50254598 2254 Q13217 DNAJC3 DnaJ homolog subfamily C member 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.487 21.692 2 0.011504 22746 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 76.774 5.4317 425990000 0 0 0 20503000 12547000 19441000 25723000 29261000 19631000 42261000 68415000 44963000 39673000 40447000 63128000 10296 2254 9376 87692;87693;87694;87695;87696;87697;87698;87699;87700;87701;87702;87703 70204;70205;70206;70207 70207 4 EAQSRCGEEIAVQFVDMVK Unmodified 2195.0351 0.035088237 304 O43175 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 2 3 1 91.894 87.383 3 1.9907E-09 108956 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.958 85.036 148310000 45702000 100150000 2463000 0 0 0 0 0 0 0 0 0 0 0 0 10297 304 9377 87704;87705;87706;87707;87708;87709 70208;70209;70210;70211;70212 70208 5 EAQSRCGEEIAVQFVDMVK Oxidation (M) 2211.03 0.030002859 304 O43175 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 84.581 79.927 3 8.1863E-18 97691 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 110.74 105.93 160710000 28740000 116340000 15630000 0 0 0 0 0 0 0 0 0 0 0 0 10298 304 9377 87710;87711;87712;87713 70213;70214;70215;70216;70217;70218 70218 388 5 EAQSSQATPVQTSQPDSSNIVK Unmodified 2301.1084 0.10844742 3295 Q8IZH2 XRN1 5'-3' exoribonuclease 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 43.982 44.302 2;3 6.1301E-29 49621 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 112.72 93.648 29080000 0 0 0 0 0 8482700 0 9820700 0 0 0 0 0 0 10776000 10299 3295 9378 87714;87715;87716;87717;87718 70219;70220;70221;70222 70221 4 EAQTLDSQIQETSI Unmodified 1561.7471 0.74714594 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.954 70.031 2 2.8743E-16 79727 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 119.53 103.9 246290000 0 0 0 11459000 13063000 16486000 16388000 12385000 12454000 21348000 27861000 32364000 20740000 24026000 37712000 10300 1226 9379 87719;87720;87721;87722;87723;87724;87725;87726;87727;87728;87729;87730 70223;70224;70225;70226;70227;70228 70224 6 EAQTLQQYR Unmodified 1135.5622 0.56218613 1669;1450 P42229;P51692 STAT5A;STAT5B Signal transducer and activator of transcription 5A;Signal transducer and activator of transcription 5B no no 0 0 0 By MS/MS 10 0 1 1 25.668 26.343 2 0.036457 27170 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.68 27.861 2564800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2564800 10301 1450;1669 9380 87731 70229 70229 1 EAQVDAEAQR Unmodified 1115.5207 0.52071524 2067 Q01970 PLCB3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 yes yes 0 0 0 By MS/MS 10 0 1 1 12.087 12.47 2 0.011113 10808 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.378 24.771 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10302 2067 9381 87732 70230 70230 1 EAQWEELK Unmodified 1031.4924 0.49237523 3217 Q8IUD2 ERC1 ELKS/Rab6-interacting/CAST family member 1 yes yes 0 0 0 By MS/MS 2 0 1 1 52.34 46.567 2 0.018072 60317 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.296 63.402 35141000 0 35141000 0 0 0 0 0 0 0 0 0 0 0 0 0 10303 3217 9382 87733 70231 70231 1 EARGNSSETSHSVPEAK Unmodified 1784.8289 0.82891851 3999 Q96T58 SPEN Msx2-interacting protein yes yes 0 0 1 By MS/MS 2 0 1 1 11.715 9.4504 3 0.0074164 12096 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 34.498 29.286 3342200 0 0 3342200 0 0 0 0 0 0 0 0 0 0 0 0 10304 3999 9383 87734 70232 70232 1 EARLVLDSVK Unmodified 1128.6503 0.65027285 482 O75347 TBCA Tubulin-specific chaperone A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 1.75 0.433 1 3 2 1 1 67.558 64.405 2 2.0143E-05 95263 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 147.95 79.322 733750000 332440000 198300000 203010000 0 0 0 0 0 0 0 0 0 0 0 0 10305 482 9384 87735;87736;87737;87738 70233;70234;70235;70236;70237;70238;70239 70234 6 EARNVTMETE Unmodified 1178.5238 0.52375171 1576 P49458 SRP9 Signal recognition particle 9 kDa protein yes yes 0 0 1 By matching By MS/MS 2 0 2 1 1 22.981 18.552 2 6.7921E-05 24390 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 135.79 125.08 493970000 25019000 468960000 0 0 0 0 0 0 0 0 0 0 0 0 0 10306 1576 9385 87739;87740 70240;70241 70240 2 EARQNVAEVESSK Unmodified 1445.711 0.71103521 3424 Q8NEF9 SRFBP1 Serum response factor-binding protein 1 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 18.572 14.972 3 0.03423 19706 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 25.376 9.0261 11337000 0 11337000 0 0 0 0 0 0 0 0 0 0 0 0 0 10307 3424 9386 87741;87742 70242 70242 0 EARTLQEPVARPSGASSSQTPNDK Unmodified 2525.247 0.24700658 3390 Q8NBA8 DTWD2 DTW domain-containing protein 2 yes yes 0 0 2 By MS/MS 2 0 1 1 34.783 31.439 4 0.00048527 39718 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 30.024 22.22 5413800 0 0 5413800 0 0 0 0 0 0 0 0 0 0 0 0 10308 3390 9387 87743 70243 70243 1 EASAALQVRATK Unmodified 1243.6884 0.68844927 3587 Q8WXD9 CASKIN1 Caskin-1 yes yes 0 0 1 By MS/MS 10 0 1 1 26.671 27.352 3 0.034728 28248 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 23.676 0 11726000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11726000 10309 3587 9388 87744 70244 70244 1 EASADLSPYVR Unmodified 1206.5881 0.58806652 128 O00203 AP3B1 AP-3 complex subunit beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 50.728 50.881 2 1.0525E-07 57522 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 148.52 107.8 393860000 0 0 0 17904000 22091000 36208000 19473000 25878000 21912000 38428000 42003000 50081000 33341000 29724000 56817000 10310 128 9389 87745;87746;87747;87748;87749;87750;87751;87752;87753;87754;87755;87756 70245;70246;70247;70248;70249;70250;70251;70252;70253;70254;70255;70256 70253 11 EASADLSPYVRK Unmodified 1334.683 0.68302954 128 O00203 AP3B1 AP-3 complex subunit beta-1 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 4 2 4 2 44.291 39.675 2;3 0.0018404 51952 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.058 58.526 103570000 0 93458000 10110000 0 0 0 0 0 0 0 0 0 0 0 0 10311 128 9390 87757;87758;87759;87760;87761;87762 70257;70258;70259;70260;70261 70258 2 EASAVLFTITK Unmodified 1178.6547 0.65468953 1672 P51812 RPS6KA3 Ribosomal protein S6 kinase alpha-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 77.105 77.208 2 0.0059429 89137 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 67.726 55.37 100270000 0 0 0 0 5741600 14424000 7059700 5715500 0 14975000 9886300 12907000 8131800 6811300 14622000 10312 1672 9391 87763;87764;87765;87766;87767;87768;87769;87770;87771;87772 70262;70263;70264;70265;70266 70262 5 EASDLLEQNR Unmodified 1173.5626 0.56258006 2990 Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching 10 0 8 1 1 1 1 1 1 1 1 35.501 35.756 2 0.047669 38977 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 45.368 34.734 34098000 0 0 0 0 3587800 3528100 2742500 0 0 3474800 4017800 4888300 7653400 0 4204900 10313 2990 9392 87773;87774;87775;87776;87777;87778;87779;87780 70267 70267 1 EASDPATPSNFLPK Unmodified 1472.7147 0.7147236 2938 Q6P5Z2 PKN3 Serine/threonine-protein kinase N3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.078 67.159 2 0.00020742 76222 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.017 65.051 82806000 0 0 0 5689600 5878900 6239100 5973700 5235600 5278100 6318400 8992400 10168000 6969800 6326100 9736400 10314 2938 9393 87781;87782;87783;87784;87785;87786;87787;87788;87789;87790;87791;87792 70268;70269;70270;70271;70272;70273;70274;70275;70276;70277;70278 70271 11 EASDPFSLNELLDELSRK Unmodified 2062.0219 0.021864239 3194 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 99.185 93.444 3 4.1626E-10 118027 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 100.58 91.019 33731000 29546000 4185000 0 0 0 0 0 0 0 0 0 0 0 0 0 10315 3194 9394 87793;87794 70279;70280;70281 70281 3 EASDPQPEEADGGLK Unmodified 1541.6845 0.68454569 1705 P52907 CAPZA1 F-actin-capping protein subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.61 2 2 13 2 2 2 1 1 1 1 1 1 1 1 1 1 1 39.492 39.34 2 2.8832E-62 92611 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 226.4 216.39 1326600000 95091000 106430000 0 92290000 68108000 83968000 71832000 77750000 57326000 84066000 108500000 143050000 107740000 99949000 130470000 10316 1705 9395 87795;87796;87797;87798;87799;87800;87801;87802;87803;87804;87805;87806;87807;87808;87809;87810;87811 70282;70283;70284;70285;70286;70287;70288;70289;70290;70291;70292;70293;70294;70295;70296;70297;70298;70299;70300;70301;70302;70303;70304 70292 23 EASEPIHVRK Unmodified 1164.6251 0.62512073 5068 Q9UQ84 EXO1 Exonuclease 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 14.268 14.016 3 0.021127 13351 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 35.511 28.232 77856000 24044000 0 0 3196600 4947100 3204100 3936200 4389000 2945700 6426900 4945200 6681700 4703900 0 8435600 10317 5068 9396 87812;87813;87814;87815;87816;87817;87818;87819;87820;87821;87822;87823 70305;70306 70305 1 EASEVFK Unmodified 808.39668 0.39668393 2895 Q6N069 NAA16 N-alpha-acetyltransferase 16, NatA auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 21.002 21.168 2 0.025588 21350 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 80.462 14.79 341740000 0 0 0 0 18207000 18409000 25460000 0 28289000 68737000 80825000 101810000 0 0 0 10318 2895 9397 87824;87825;87826;87827;87828;87829;87830 70307;70308 70308 2 EASFEYLQNEGER Unmodified 1570.69 0.68996541 2231;180 Q13085;O00763 ACACA;ACACB Acetyl-CoA carboxylase 1;Biotin carboxylase;Acetyl-CoA carboxylase 2;Biotin carboxylase no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 57.681 58.004 2 0.00078701 65885 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 79.201 73.708 31629000 0 0 0 0 0 0 6028200 0 0 0 8357700 0 0 7142100 10101000 10319 2231;180 9398 87831;87832;87833;87834;87835;87836;87837;87838;87839 70309;70310;70311;70312;70313;70314;70315;70316;70317 70313 8 EASFVLHTIGK Unmodified 1200.6503 0.65027285 2531 Q15418 RPS6KA1 Ribosomal protein S6 kinase alpha-1 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 57.886 58.338 3 0.0141 65946 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 41.598 34.391 35073000 0 0 0 0 0 0 0 0 0 0 0 12386000 7137900 0 15549000 10320 2531 9399 87840;87841;87842 70318;70319;70320 70320 3 EASGEAEAEAEEADSGPVPGGERPAGEGQGEPTSRPK Unmodified 3634.6255 0.62553384 4801 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 yes yes 0 0 2 By MS/MS By MS/MS 10 0 2 1 1 44.892 45.241 4 1.4909E-30 49890 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 53.569 51.986 18352000 0 0 0 0 0 0 0 0 0 0 8339600 0 0 10012000 0 10321 4801 9400 87843;87844 70321;70322;70323 70323 3 EASGETTGVDITK Unmodified 1306.6252 0.62523989 464 O75152 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.237 30.429 2 3.643E-25 32733 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 158.94 141.03 317480000 0 0 0 14099000 19714000 25158000 20807000 20855000 21677000 21220000 33592000 38026000 29250000 32878000 40204000 10322 464 9401 87845;87846;87847;87848;87849;87850;87851;87852;87853;87854;87855;87856 70324;70325;70326;70327;70328;70329;70330;70331;70332;70333;70334;70335 70333 12 EASGLSADSLAR Unmodified 1175.5782 0.57823012 4424 Q9H6T0 ESRP2 Epithelial splicing regulatory protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.24 41.418 2 1.0115E-05 45055 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 125.7 102.99 282490000 0 0 0 14435000 17250000 17797000 18025000 21695000 16475000 24598000 28279000 33343000 34609000 18046000 37943000 10323 4424 9402 87857;87858;87859;87860;87861;87862;87863;87864;87865;87866;87867;87868 70336;70337;70338;70339;70340;70341;70342 70338 7 EASHVLEVK Unmodified 1010.5397 0.53965977 5247 Q9Y5S2 CDC42BPB Serine/threonine-protein kinase MRCK beta yes yes 0 0 0 By MS/MS 10 0 1 1 21.759 22.411 2 0.042663 22433 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.972 20.399 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10324 5247 9403 87869 70343 70343 1 EASIDILHSIVK Unmodified 1323.7398 0.73981614 129 O00231 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 0 0 0 By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 80.855 80.903 3 0.034564 93707 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 31.722 23.417 37118000 0 0 0 722230 1305800 5410800 1041400 0 1740300 6064600 6137000 5935800 769590 1765400 6224900 10325 129 9404 87870;87871;87872;87873;87874;87875;87876;87877;87878;87879;87880 70344 70344 1 EASLGPIR Unmodified 841.46577 0.46576654 2956 Q6PIW4 FIGNL1 Fidgetin-like protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 37.707 37.89 2 0.03661 42325 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.787 14.693 62816000 0 0 0 3657300 3749500 5195700 5125100 4493600 3877500 0 7361100 8847400 5587600 5184400 9736400 10326 2956 9405 87881;87882;87883;87884;87885;87886;87887;87888;87889;87890;87891 70345;70346 70345 2 EASNSSRETEPPPK Unmodified 1527.7165 0.71651452 1081 P18858 LIG1 DNA ligase 1 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 8.7241 5.4211 3 0.0015224 7276 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 81.494 76.693 61387000 0 61387000 0 0 0 0 0 0 0 0 0 0 0 0 0 10327 1081 9406 87892;87893 70347;70348 70348 1 EASQGSSASSAPHSVK Unmodified 1528.7118 0.71176349 3935 Q96NB3 ZNF830 Zinc finger protein 830 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 9.7687 6.4601 3 0.00012779 9205 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.813 51.199 36041000 0 36041000 0 0 0 0 0 0 0 0 0 0 0 0 0 10328 3935 9407 87894;87895 70349 70349 1 EASRPPEEPSAPSPTLPAQFK Unmodified 2235.1172 0.11716161 4381 Q9H3P2 NELFA Negative elongation factor A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 67.645 67.672 3 1.5066E-28 78422 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 102.39 94.076 359860000 0 0 0 23824000 24930000 39686000 30961000 27164000 21150000 40149000 45886000 51939000 54167000 0 0 10329 4381 9408 87896;87897;87898;87899;87900;87901;87902;87903;87904;87905;87906 70350;70351;70352;70353;70354;70355;70356;70357;70358;70359;70360;70361;70362 70361 13 EASRSSPVEFECINEK Unmodified 1880.8574 0.85744145 458 O75131 CPNE3 Copine-3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 57.728 52.031 3 1.6643E-05 65075 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 97.767 83.595 159620000 21064000 119450000 19110000 0 0 0 0 0 0 0 0 0 0 0 0 10330 458 9409 87907;87908;87909;87910 70363;70364;70365;70366;70367;70368 70367 6 EASTGVLK Unmodified 803.43888 0.43888309 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 0 By MS/MS 10 0 1 1 15.104 15.621 2 0.033366 14867 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 53.754 16.779 9752800 0 0 0 0 0 0 0 0 0 0 9752800 0 0 0 0 10331 2361 9410 87911 70369 70369 1 EASTTAAAPGEETSPVQVPAR Unmodified 2068.0073 0.0072768075 2763 Q5SXM2 SNAPC4 snRNA-activating protein complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 2 2 2 2 53.33 53.095 2;3 0.01148 60527 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 45.992 40.608 30856000 0 0 0 7200700 8997000 0 7582900 7075300 0 0 0 0 0 0 0 10332 2763 9411 87912;87913;87914;87915;87916;87917;87918;87919 70370;70371;70372 70372 3 EATADDLIK Unmodified 974.49204 0.49204087 2608 Q16531 DDB1 DNA damage-binding protein 1 yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS 10 0 5 1 1 1 1 1 38.351 38.365 2 0.045968 41810 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 43.083 11.131 18168000 0 0 0 4403800 2398400 0 0 1701400 1683300 0 0 7981100 0 0 0 10333 2608 9412 87920;87921;87922;87923;87924 70373 70373 1 EATAGNPGGQTVR Unmodified 1256.6109 0.61092723 1224 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.595 13.756 2 4.7743E-12 12603 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 123.79 104.01 200730000 0 0 0 9202400 9970300 15051000 10155000 9468600 9552800 19157000 18105000 25254000 21968000 17839000 35011000 10334 1224 9413 87925;87926;87927;87928;87929;87930;87931;87932;87933;87934;87935;87936 70374;70375;70376;70377;70378;70379;70380;70381;70382;70383;70384;70385;70386;70387 70378 14 EATAQKPTGSVGSTVTTPPPLVR Unmodified 2293.2278 0.22777469 3208 Q86YP4 GATAD2A Transcriptional repressor p66-alpha yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.781 60.885 3 0.0035416 69419 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 27.946 19.658 211720000 0 0 0 12864000 15694000 15702000 15743000 16255000 10860000 20357000 19042000 23313000 19514000 14159000 28219000 10335 3208 9414 87937;87938;87939;87940;87941;87942;87943;87944;87945;87946;87947;87948 70388;70389 70388 2 EATDAIGHLDR Unmodified 1196.5786 0.57856447 2207 Q12906 ILF3 Interleukin enhancer-binding factor 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 34.172 34.355 2;3 0.0030734 36578 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 51.013 37.66 869860000 0 0 0 67022000 42788000 77250000 57130000 45460000 44307000 72272000 70496000 90112000 78442000 88953000 135620000 10336 2207 9415 87949;87950;87951;87952;87953;87954;87955;87956;87957;87958;87959;87960;87961;87962;87963;87964;87965;87966;87967;87968;87969;87970;87971;87972 70390;70391;70392;70393;70394;70395;70396;70397;70398;70399;70400;70401;70402 70397 9 EATDEELEK Unmodified 1062.4717 0.47169936 2332 Q13620 CUL4B Cullin-4B yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.436 15.606 2 0.0037017 14134 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 101.64 84.258 113430000 0 0 0 3777100 3812400 8153800 6778800 6215200 3621700 9363500 14019000 13874000 9628800 15026000 19164000 10337 2332 9416 87973;87974;87975;87976;87977;87978;87979;87980;87981;87982;87983;87984 70403;70404;70405;70406;70407;70408;70409;70410;70411;70412;70413 70410 10 EATDEELERTLDK Unmodified 1547.7315 0.73149588 2331 Q13619 CUL4A Cullin-4A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 5.64 3.79 5 3 6 4 3 1 1 1 1 1 1 1 51.005 48.066 2;3 1.7039E-92 64827 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 237.68 186.61 809920000 168640000 518550000 22061000 10633000 10389000 0 13631000 9232500 0 18270000 0 0 0 0 38521000 10338 2331 9417 87985;87986;87987;87988;87989;87990;87991;87992;87993;87994;87995;87996;87997;87998 70414;70415;70416;70417;70418;70419;70420;70421;70422;70423;70424;70425;70426;70427 70423 10 EATDPRPCEVENAVESWR Unmodified 2143.9593 0.95928076 1524 P47755 CAPZA2 F-actin-capping protein subunit alpha-2 yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 73.398 73.703 3 0.030893 84413 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 24.793 20.825 22495000 0 0 0 0 0 0 0 0 0 0 9503100 0 0 0 12992000 10339 1524 9418 87999;88000 70428 70428 1 EATELNEDGSQVK Unmodified 1418.6525 0.65251728 26 A6NED2 RCCD1 RCC1 domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 24.571 25.071 2 5.3333E-08 25707 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 102.52 83.209 7192200 0 0 0 0 0 0 0 0 0 0 0 0 0 2582200 4610000 10340 26 9419 88001;88002 70429;70430 70429 2 EATEQEIR Unmodified 974.46689 0.46688876 4209 Q9BWF3;Q9BQ04 RBM4;RBM4B RNA-binding protein 4;RNA-binding protein 4B yes no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 12.428 12.576 2 0.013971 11423 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 112.17 76.291 92114000 0 0 0 5951300 5384100 7376800 6393800 0 5791900 0 10732000 13352000 11394000 8576400 17161000 10341 4209 9420 88003;88004;88005;88006;88007;88008;88009;88010;88011;88012 70431;70432 70432 1 EATFSNPK Unmodified 892.42905 0.42904669 517 O75534 CSDE1 Cold shock domain-containing protein E1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 5.4 3.77 2 1 2 2 1 1 1 17.768 15.936 2 0.020846 16426 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 62.464 38.509 614670000 0 586150000 4500000 0 0 0 0 0 0 0 0 0 7783500 16235000 0 10342 517 9421 88013;88014;88015;88016;88017 70433;70434;70435 70435 2 EATGHFQESEPFSHIDPEESEETR Unmodified 2787.1896 0.18961086 2476 Q15021 NCAPD2 Condensin complex subunit 1 yes yes 0 0 0 By MS/MS 10 0 1 1 61.982 62.555 4 0.00043471 70793 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.264 31.473 11366000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11366000 10343 2476 9422 88018 70436 70436 1 EATGLHVHER Unmodified 1147.5734 0.57341951 2852 Q68CP9 ARID2 AT-rich interactive domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 11.107 11.218 3 0.013591 9041 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.706 35.35 39601000 0 0 0 2165500 1671100 3055700 0 0 0 0 0 7961200 5975200 8209900 10562000 10344 2852 9423 88019;88020;88021;88022;88023;88024;88025 70437 70437 1 EATGLSPQAAQEK Unmodified 1328.6572 0.65720872 1046 P17029 ZKSCAN1 Zinc finger protein with KRAB and SCAN domains 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 26.053 26.194 2 0.0053043 27972 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 49.189 34.038 41749000 0 0 0 3571500 4607300 5352500 3023500 3607200 2489500 3985700 4255100 5993600 4863200 0 0 10345 1046 9424 88026;88027;88028;88029;88030;88031;88032;88033;88034;88035 70438;70439;70440;70441;70442 70438 5 EATNPPVIQEEK Unmodified 1353.6776 0.67760981 1270 P30101 PDIA3 Protein disulfide-isomerase A3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.013 35.194 2 8.3429E-05 39269 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 125.74 115.78 710290000 0 0 0 26080000 19411000 34838000 23743000 26215000 24837000 33920000 108530000 73174000 33935000 80444000 225160000 10346 1270 9425 88036;88037;88038;88039;88040;88041;88042;88043;88044;88045;88046;88047 70443;70444;70445;70446;70447;70448;70449;70450;70451;70452;70453;70454;70455 70455 12 EATNPPVIQEEKPK Unmodified 1578.8253 0.82533668 1270 P30101 PDIA3 Protein disulfide-isomerase A3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 32.945 33.222 3 0.00042128 36614 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 65.092 54.458 290880000 0 0 0 0 19904000 0 20145000 15795000 0 12487000 54773000 50409000 19509000 28657000 69205000 10347 1270 9426 88048;88049;88050;88051;88052;88053;88054;88055;88056 70456;70457;70458;70459;70460;70461;70462;70463 70463 5 EATNTTSEPSAPSQDLLDLSPSPR Unmodified 2512.1929 0.19290533 531 O75674 TOM1L1 TOM1-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.893 78.951 3 2.3814E-11 90464 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 49.25 46.488 87384000 0 0 0 3023200 4711600 5614500 7021900 6689500 9596300 9182600 8226400 9378200 5669000 7646500 10625000 10348 531 9427 88057;88058;88059;88060;88061;88062;88063;88064;88065;88066;88067;88068 70464;70465;70466;70467;70468;70469;70470;70471;70472;70473;70474;70475;70476 70472 13 EATPVVHETEPESGSQPR Unmodified 1948.9126 0.91264814 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 30.312 30.63 3 7.2507E-05 33368 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 55.33 39.938 60450000 0 0 0 0 0 5578900 5395400 0 4220400 6411800 7385200 10096000 7208100 8464500 5689700 10349 5216 9428 88069;88070;88071;88072;88073;88074;88075;88076;88077;88078;88079 70477;70478;70479;70480;70481;70482;70483 70480 6 EATPVVHETEPESGSQPRPAVLSGYFK Unmodified 2911.4352 0.43520128 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 1 2 2 2 2 2 1 2 2 2 2 72.553 72.667 3;4 5.6401E-100 83368 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 127.38 121.41 423390000 0 0 0 6927300 12319000 38194000 21957000 30297000 38706000 50833000 31460000 50202000 33404000 34112000 74985000 10350 5216 9429 88080;88081;88082;88083;88084;88085;88086;88087;88088;88089;88090;88091;88092;88093;88094;88095;88096;88097;88098;88099;88100 70484;70485;70486;70487;70488;70489;70490;70491;70492;70493;70494;70495;70496;70497;70498;70499;70500;70501;70502 70491 19 EATPYPALIK Unmodified 1101.607 0.60701105 1006 P14735 IDE Insulin-degrading enzyme yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 65.594 64.044 2 0.0033402 78395 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 95.909 78.616 944120000 13913000 746670000 12826000 75305000 4736100 5545000 0 5628800 0 7992100 17028000 11890000 6892600 8261700 27427000 10351 1006 9430 88101;88102;88103;88104;88105;88106;88107;88108;88109;88110;88111;88112;88113;88114 70503;70504;70505;70506;70507;70508;70509;70510 70507 7 EATQILSVPK Unmodified 1084.6128 0.61282471 1446 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.558 55.688 2 0.0065786 62908 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 116.05 83.696 1761500000 0 0 0 108070000 113800000 127610000 147610000 147830000 97299000 151690000 161950000 220870000 161500000 130990000 192290000 10352 1446 9431 88115;88116;88117;88118;88119;88120;88121;88122;88123;88124;88125;88126 70511;70512;70513;70514;70515 70515 1 EATQNSSQFMK Oxidation (M) 1285.5609 0.5608655 5287 Q9Y6J9 TAF6L TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 13.359 13.407 2 0.015495 12916 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 41.448 38.441 8534700 0 0 0 1310300 1254400 0 1484200 0 913860 0 0 0 1985900 1586000 0 10353 5287 9432 88127;88128;88129;88130;88131;88132;88133 70516;70517 70516 6695 2 EATSSTSNFSSLSSK Unmodified 1531.7002 0.70019575 4814 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 0 0 0 By MS/MS 10 0 1 1 37.053 37.789 2 3.9732E-59 40794 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 174.84 145.1 31734000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31734000 10354 4814 9433 88134 70518 70518 1 EATSVHDLNDK Unmodified 1227.5731 0.57314474 2239 Q13136 PPFIA1 Liprin-alpha-1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 14.804 14.951 3 0.02671 14384 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 32.263 20.203 29841000 0 0 0 0 0 7491300 3703500 0 4146500 6909400 0 7590200 0 0 0 10355 2239 9434 88135;88136;88137;88138;88139 70519 70519 1 EATTDFTVDSRPLTQVGGDHIK Unmodified 2386.1765 0.1764674 487 O75369 FLNB Filamin-B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 66.886 67.126 3 5.8652E-05 76180 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 46.178 38.089 44841000 0 0 0 0 0 6071700 0 0 0 3162600 5469000 6801000 2145400 4132000 17059000 10356 487 9435 88140;88141;88142;88143;88144;88145;88146 70520;70521;70522;70523 70522 4 EATTEFSVDAR Unmodified 1224.5622 0.5622457 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.046 43.221 2 4.1046E-06 47371 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 142.43 127.18 530170000 0 0 0 26025000 17428000 31767000 24615000 26571000 20915000 43601000 65362000 81265000 36436000 45272000 110910000 10357 1124 9436 88147;88148;88149;88150;88151;88152;88153;88154;88155;88156;88157;88158 70524;70525;70526;70527;70528;70529;70530;70531;70532;70533;70534;70535;70536;70537;70538;70539 70529 15 EATTNAPFR Unmodified 1005.488 0.48795855 1289 P30740 SERPINB1 Leukocyte elastase inhibitor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 26.162 26.549 2 0.014158 27315 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.523 58.42 85951000 0 0 0 7427300 0 0 0 0 0 0 18366000 16734000 0 19489000 23934000 10358 1289 9437 88159;88160;88161;88162;88163 70540;70541 70540 1 EATTNAPFRLNK Unmodified 1360.7099 0.709913 1289 P30740 SERPINB1 Leukocyte elastase inhibitor yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.89 3.52 5 14 2 1 2 1 1 1 1 1 1 1 1 1 1 2 2 43.177 41.808 2;3 4.425E-09 58632 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 141.2 122.42 684010000 503640000 23320000 36640000 4823500 4029400 5555000 6114800 5686400 6190000 9489300 14307000 11191000 6418500 14633000 31975000 10359 1289 9438 88164;88165;88166;88167;88168;88169;88170;88171;88172;88173;88174;88175;88176;88177;88178;88179;88180;88181;88182 70542;70543;70544;70545;70546;70547;70548 70544 7 EATVIQDLK Unmodified 1015.555 0.55497548 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 49.161 49.453 2 0.0052332 55079 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 79.474 41.916 46741000 0 0 0 0 0 0 2465100 4829700 0 0 0 0 0 15208000 24238000 10360 2495 9439 88183;88184;88185;88186 70549 70549 1 EATWTMSNITAGR Unmodified 1436.6718 0.67181293 1682 P52292 KPNA2 Importin subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 68.432 68.473 2 0.0048564 78983 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 60.434 51.001 36547000 0 0 0 3389400 2804200 4468600 2594200 3095100 0 0 0 5576900 3321200 2919000 8378400 10361 1682 9440 88187;88188;88189;88190;88191;88192;88193;88194;88195 70550;70551;70552;70553;70554;70555;70556;70557 70555 8 EAVAAEVK Unmodified 815.43888 0.43888309 2003 P82970 HMGN5 High mobility group nucleosome-binding domain-containing protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.06 2.58 2 15 1 1 1 1 1 1 1 2 2 2 1 1 2 16.525 16.288 2 0.025032 19334 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.04 48.939 283690000 13740000 88343000 0 2611900 0 23794000 7557400 6540800 5113600 23656000 24740000 23346000 11321000 14947000 37979000 10362 2003 9441 88196;88197;88198;88199;88200;88201;88202;88203;88204;88205;88206;88207;88208;88209;88210;88211;88212 70558;70559;70560 70558 1 EAVAAEVKNEEEDQKEDEEDQNEEK Unmodified 2933.2534 0.25339291 2003 P82970 HMGN5 High mobility group nucleosome-binding domain-containing protein 5 yes yes 0 0 2 By MS/MS 2 0 2 2 38.571 32.009 3;4 2.4213E-56 44418 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 124.86 124.26 38278000 38278000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10363 2003 9442 88213;88214 70561;70562;70563 70563 3 EAVAMESYAK Oxidation (M) 1113.5012 0.50122535 1980 P78371 CCT2 T-complex protein 1 subunit beta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.73 3.77 2 2 11 2 2 1 1 1 1 1 1 1 1 1 1 1 31.255 31.237 2 0.0012872 19346 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 97.431 80.045 692040000 81398000 219860000 0 26474000 19920000 36838000 30029000 0 24043000 41169000 42514000 53715000 36991000 24940000 54142000 10364 1980 9443 88215;88216;88217;88218;88219;88220;88221;88222;88223;88224;88225;88226;88227;88228;88229 70564;70565;70566;70567;70568;70569;70570;70571;70572;70573;70574;70575;70576;70577;70578;70579;70580;70581 70574 3192 18 EAVAMESYAK Unmodified 1097.5063 0.50631073 1980 P78371 CCT2 T-complex protein 1 subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 37.173 36.068 2 0.00082167 44911 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.39 83.824 3295100000 64000000 1439700000 6274100 79091000 80673000 144500000 149610000 101890000 90022000 160790000 195010000 185340000 141350000 156170000 300730000 10365 1980 9443 88230;88231;88232;88233;88234;88235;88236;88237;88238;88239;88240;88241;88242;88243;88244;88245 70582;70583;70584;70585;70586;70587;70588;70589;70590;70591;70592;70593;70594;70595;70596;70597;70598;70599 70586 18 EAVAPVQEESDLEK Unmodified 1542.7413 0.74133228 2281 Q13409 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.94 3.58 1 3 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 51.766 51.988 2 1.2757E-19 53258 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 166.14 155.22 545490000 0 68207000 0 25171000 24467000 25381000 29855000 25372000 24381000 35516000 56835000 69031000 42028000 38083000 81166000 10366 2281 9444 88246;88247;88248;88249;88250;88251;88252;88253;88254;88255;88256;88257;88258;88259;88260;88261 70600;70601;70602;70603;70604;70605;70606;70607;70608;70609;70610;70611;70612;70613;70614;70615;70616;70617 70600 18 EAVAQYQMIIK Oxidation (M) 1308.6748 0.67477304 2947 Q6PGP7 TTC37 Tetratricopeptide repeat protein 37 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 63.219 57.882 2 0.046967 74321 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 45.738 33.513 53546000 0 53546000 0 0 0 0 0 0 0 0 0 0 0 0 0 10367 2947 9445 88262;88263 70618 70618 1 EAVAQYQMIIK Unmodified 1292.6799 0.67985842 2947 Q6PGP7 TTC37 Tetratricopeptide repeat protein 37 yes yes 0 0 0 By MS/MS 2 0 1 1 74.534 69.379 2 5.2115E-09 87121 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 152.63 125.84 36188000 0 36188000 0 0 0 0 0 0 0 0 0 0 0 0 0 10368 2947 9445 88264 70619 70619 1 EAVCEVALDYK Unmodified 1295.6068 0.60675306 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 60.005 59.377 2 0.00046543 74768 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.06 82.958 109960000 0 80664000 0 0 0 4710100 0 0 2082000 3503600 4280900 0 0 3970700 10754000 10369 2047 9446 88265;88266;88267;88268;88269;88270;88271 70620;70621;70622 70620 2 EAVCEVALDYKK Unmodified 1423.7017 0.70171607 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By matching 9.22 2.2 1 8 1 1 1 1 1 1 1 1 1 48.852 48.607 3 2.454E-05 60243 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 115.33 112.7 82743000 0 20444000 0 0 0 0 5613200 3669900 2264700 9097700 11185000 10833000 0 7757700 11876000 10370 2047 9447 88272;88273;88274;88275;88276;88277;88278;88279;88280 70623;70624 70623 1 EAVDILK Unmodified 786.44872 0.4487195 736 P00813 ADA Adenosine deaminase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 49.654 43.805 2 0.045032 57330 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.616 9.2322 145520000 6707200 136500000 2315800 0 0 0 0 0 0 0 0 0 0 0 0 10371 736 9448 88281;88282;88283 70625 70625 1 EAVEAIQNSTSIK Unmodified 1388.7147 0.7147236 2332 Q13620 CUL4B Cullin-4B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 46.043 44.68 2 7.9363E-47 56365 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 222.3 194.09 508490000 14510000 258970000 0 12513000 12057000 19791000 13519000 16870000 9572600 26904000 23907000 23993000 19342000 15922000 40625000 10372 2332 9449 88284;88285;88286;88287;88288;88289;88290;88291;88292;88293;88294;88295;88296;88297;88298;88299 70626;70627;70628;70629 70626 4 EAVEENGVITDK Unmodified 1302.6303 0.63032527 3905 Q96KB5 PBK Lymphokine-activated killer T-cell-originated protein kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33.683 33.03 2 3.2634E-08 36273 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 150.61 125.83 155090000 6654700 15330000 0 8020800 5134500 13306000 9762500 7084400 4727700 13817000 17594000 13540000 10409000 9573000 20136000 10373 3905 9450 88300;88301;88302;88303;88304;88305;88306;88307;88308;88309;88310;88311;88312;88313 70630;70631;70632;70633;70634;70635;70636;70637;70638;70639;70640;70641;70642;70643 70637 14 EAVELPLTHFELYK Unmodified 1687.8821 0.88212328 1482 P43686 PSMC4 26S protease regulatory subunit 6B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 86.352 86.481 3 0.007771 100158 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 28.283 25.203 36569000 0 0 0 0 0 3316300 0 0 0 8619700 6854900 5121700 0 0 12657000 10374 1482 9451 88314;88315;88316;88317;88318 70644;70645 70644 2 EAVEMAYK Unmodified 939.43717 0.43716853 3903 Q96K76 USP47 Ubiquitin carboxyl-terminal hydrolase 47 yes yes 0 0 0 By MS/MS 2 0 1 1 35.639 30.792 2 0.043506 40210 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.198 36.727 61774000 0 61774000 0 0 0 0 0 0 0 0 0 0 0 0 0 10375 3903 9452 88319 70646 70646 1 EAVEQFESQGVDLSNIVK Unmodified 1990.9848 0.98475045 2904 Q6NXE6 ARMC6 Armadillo repeat-containing protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 2 1 2 2 2 83.674 83.19 2;3 1.1097E-80 101774 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 240.73 205.23 467780000 0 378370000 0 0 2082400 7011400 0 3217800 0 21978000 8330100 13932000 0 10292000 22564000 10376 2904 9453 88320;88321;88322;88323;88324;88325;88326;88327;88328;88329;88330;88331;88332;88333 70647;70648;70649;70650;70651;70652;70653;70654;70655 70650 9 EAVESQRMCELMK Unmodified 1609.7262 0.72623304 1409 P40222 TXLNA Alpha-taxilin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 55.364 49.395 3 0.0052128 61858 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 58.674 45.556 75902000 7455100 47630000 20817000 0 0 0 0 0 0 0 0 0 0 0 0 10377 1409 9454 88334;88335;88336 70656;70657 70657 2 EAVFFQSHSAR Unmodified 1277.6153 0.61528433 1384 P36954 POLR2I DNA-directed RNA polymerase II subunit RPB9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 39.31 39.905 3 0.019173 43739 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 36.447 30.005 29283000 0 0 0 0 0 0 0 0 0 0 0 11213000 0 5259100 12811000 10378 1384 9455 88337;88338;88339 70658 70658 1 EAVGDLLDAFK Unmodified 1176.6027 0.60265396 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.9 3.81 6 2 12 3 3 2 1 1 1 1 1 1 1 1 1 1 1 1 88.499 87.436 2 4.1046E-06 101461 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 142.43 81.837 3483900000 181880000 1280900000 27946000 44227000 103800000 170190000 96389000 146840000 148340000 226440000 207960000 226140000 119640000 173890000 329380000 10379 2102 9456 88340;88341;88342;88343;88344;88345;88346;88347;88348;88349;88350;88351;88352;88353;88354;88355;88356;88357;88358;88359 70659;70660;70661;70662;70663;70664;70665;70666;70667;70668;70669;70670;70671;70672;70673;70674;70675;70676;70677;70678;70679;70680;70681;70682;70683;70684;70685;70686 70659 28 EAVGGQAEDHLK Unmodified 1252.6048 0.60477922 3238 Q8IWC1 MAP7D3 MAP7 domain-containing protein 3 yes yes 0 0 0 By MS/MS 2 0 1 1 24.865 20.737 2 0.011833 27348 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.416 52.988 15333000 0 15333000 0 0 0 0 0 0 0 0 0 0 0 0 0 10380 3238 9457 88360 70687 70687 1 EAVGHTGYLTFATK Unmodified 1493.7514 0.75144346 3841 Q96FX7 TRMT61A tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 65.851 59.859 3 0.0028583 73724 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 56.482 44.505 116140000 72989000 29937000 13214000 0 0 0 0 0 0 0 0 0 0 0 0 10381 3841 9458 88361;88362;88363 70688;70689;70690;70691;70692;70693 70693 6 EAVICLQNEK Unmodified 1202.5965 0.59652272 3509 Q8TDY2 RB1CC1 RB1-inducible coiled-coil protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 49.42 43.714 2 0.025229 56773 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.205 71.691 38024000 0 38024000 0 0 0 0 0 0 0 0 0 0 0 0 0 10382 3509 9459 88364 70694 70694 0 EAVILPIK Unmodified 881.5586 0.5586043 484;5026 O75351;Q9UN37 VPS4B;VPS4A Vacuolar protein sorting-associated protein 4B;Vacuolar protein sorting-associated protein 4A no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70.068 69.572 2 0.015415 79917 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 68.915 42.051 438420000 0 290740000 6258700 6999900 6007000 16041000 9986200 7429900 7091000 15512000 14849000 14465000 9154500 12669000 21215000 10383 484;5026 9460 88365;88366;88367;88368;88369;88370;88371;88372;88373;88374;88375;88376;88377;88378 70695;70696;70697;70698;70699 70697 5 EAVILYAQPSER Unmodified 1374.7143 0.71432967 4225 Q9BXI9 C1QTNF6 Complement C1q tumor necrosis factor-related protein 6 yes yes 0 0 0 By MS/MS 10 0 1 1 59.812 59.295 2 0.017049 67912 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 50.284 31.538 1991100 0 0 0 0 1991100 0 0 0 0 0 0 0 0 0 0 10384 4225 9461 88379 70700 70700 1 EAVLIDPVLETAPR Unmodified 1521.8403 0.84025847 669 O95571 ETHE1 Persulfide dioxygenase ETHE1, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 83.094 83.194 2 0.0041801 96419 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 54.776 29.984 3622700 0 0 0 0 0 2030500 1592200 0 0 0 0 0 0 0 0 10385 669 9462 88380;88381 70701 70701 1 EAVLNAYR Unmodified 934.48723 0.48723027 2476 Q15021 NCAPD2 Condensin complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 36.521 36.776 2 0.0094314 41104 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 82.913 41.611 85709000 0 0 0 10665000 0 21144000 0 0 0 0 0 26397000 0 0 27502000 10386 2476 9463 88382;88383;88384;88385 70702;70703 70702 2 EAVLSCSQALK Unmodified 1204.6122 0.61217279 2947 Q6PGP7 TTC37 Tetratricopeptide repeat protein 37 yes yes 0 0 0 By MS/MS 2 0 1 1 47.837 42.274 2 0.00066044 55006 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.277 69.069 63780000 0 63780000 0 0 0 0 0 0 0 0 0 0 0 0 0 10387 2947 9464 88386 70704;70705 70705 2 EAVREGRPPEPTPAK Unmodified 1632.8584 0.85836815 5066 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 24.301 20.256 3 0.034468 25386 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 44.13 15.173 38951000 8618500 0 30332000 0 0 0 0 0 0 0 0 0 0 0 0 10388 5066 9465 88387;88388 70706 70706 0 EAVREGSPANWK Unmodified 1342.663 0.6629628 716 O96019 ACTL6A Actin-like protein 6A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29.205 28.42 3 0.0097542 30128 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 43.501 35.091 510260000 25310000 66859000 109690000 13170000 12728000 16180000 18288000 17723000 14754000 26437000 39921000 37837000 25995000 30107000 55253000 10389 716 9466 88389;88390;88391;88392;88393;88394;88395;88396;88397;88398;88399;88400;88401;88402;88403 70707;70708;70709;70710 70710 3 EAVRYINENLIVNTDELGRDCLINAAK Unmodified 3102.5768 0.57679692 1067 P17987 TCP1 T-complex protein 1 subunit alpha yes yes 0 0 2 By MS/MS 2 0 1 1 90.029 81.898 3 0.039586 106494 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 28.434 15.941 12019000 12019000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10390 1067 9467 88404 70711 70711 1 EAVSLLR Unmodified 786.45995 0.45995289 2346 Q13835 PKP1 Plakophilin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 44.939 44.983 2 0.015408 50509 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 118.01 40.291 160560000 0 0 0 41650000 7785700 9644500 12048000 67088000 0 0 0 8958400 13389000 0 0 10391 2346 9468 88405;88406;88407;88408;88409;88410;88411 70712;70713;70714;70715 70712 4 EAVSSSHGPSDPTDRAEVEK Unmodified 2096.9611 0.9610549 1739 P54278 PMS2 Mismatch repair endonuclease PMS2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.17 3.33 6 1 23 2 3 2 2 2 2 2 2 2 2 2 1 2 2 2 24.003 23.153 3;4 5.4686E-53 23709 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 118.24 90.388 578360000 21727000 53354000 7404800 28756000 21719000 33357000 34097000 35115000 20253000 48680000 41883000 34530000 62694000 52491000 82301000 10392 1739 9469 88412;88413;88414;88415;88416;88417;88418;88419;88420;88421;88422;88423;88424;88425;88426;88427;88428;88429;88430;88431;88432;88433;88434;88435;88436;88437;88438;88439;88440;88441 70716;70717;70718;70719;70720;70721;70722;70723;70724;70725;70726;70727;70728;70729;70730;70731;70732;70733;70734;70735;70736;70737;70738;70739 70728 19 EAVSYYNALEK Unmodified 1285.619 0.6190323 3806 Q96EA4 SPDL1 Protein Spindly yes yes 0 0 0 By MS/MS 2 0 1 1 59.959 54.101 2 0.00042626 69661 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.21 87.215 41910000 0 41910000 0 0 0 0 0 0 0 0 0 0 0 0 0 10393 3806 9470 88442 70740 70740 1 EAVTARK Unmodified 773.43955 0.43955179 395 O60318 MCM3AP Germinal-center associated nuclear protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 14.613 11.312 2 0.017764 14157 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 132.96 33.576 551680000 237340000 181390000 132950000 0 0 0 0 0 0 0 0 0 0 0 0 10394 395 9471 88443;88444;88445;88446 70741;70742;70743 70741 1 EAVTEILGIEPDREK Unmodified 1697.8836 0.88357984 2553 Q15631 TSN Translin yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 75.492 75.698 3 0.0076314 86727 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.048 27.518 44719000 0 0 0 0 0 0 0 4498400 0 6254900 0 11754000 0 0 22212000 10395 2553 9472 88447;88448;88449;88450 70744;70745 70744 2 EAVTFDQANPTQILGK Unmodified 1730.8839 0.88391419 5085 Q9Y263 PLAA Phospholipase A-2-activating protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.11 3.8 6 1 12 2 4 1 1 1 1 1 1 1 1 1 1 1 1 1 80.217 78.348 2;3 2.2511E-187 96500 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 307.03 300.33 1689500000 114440000 1255200000 2370700 8963400 9065500 36026000 18346000 14736000 14072000 36854000 32999000 28391000 18135000 31851000 67999000 10396 5085 9473 88451;88452;88453;88454;88455;88456;88457;88458;88459;88460;88461;88462;88463;88464;88465;88466;88467;88468;88469 70746;70747;70748;70749;70750;70751;70752;70753;70754;70755;70756;70757;70758;70759;70760;70761;70762;70763;70764;70765;70766;70767 70750 22 EAVTGNGIGGK Unmodified 1001.5142 0.5141733 134 O00257 CBX4 E3 SUMO-protein ligase CBX4 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 17.075 17.256 2 0.0017809 15981 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.747 19.317 29863000 0 0 0 2279600 0 3471500 3093500 0 0 3675800 0 6020300 0 5628500 5693900 10397 134 9474 88470;88471;88472;88473;88474;88475;88476 70768;70769;70770;70771 70769 3 EAVTILSQQR Unmodified 1143.6248 0.62478638 4525 Q9HD26 GOPC Golgi-associated PDZ and coiled-coil motif-containing protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.653 46.819 2 0.0076472 52588 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 77.355 43.183 77322000 0 0 0 3474700 2775900 9449200 5192800 4107000 2574600 8789400 9359700 6736000 5976100 6169200 12717000 10398 4525 9475 88477;88478;88479;88480;88481;88482;88483;88484;88485;88486;88487;88488 70772;70773;70774;70775;70776;70777;70778;70779;70780;70781;70782 70773 11 EAVVHGLNESEASYLITSVELLESK Unmodified 2716.3807 0.3807061 403 O60488 ACSL4 Long-chain-fatty-acid--CoA ligase 4 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 98.969 94.937 3 4.1203E-06 113889 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 65.213 58.564 24703000 0 24703000 0 0 0 0 0 0 0 0 0 0 0 0 0 10399 403 9476 88489;88490 70783;70784;70785 70784 3 EAWPHIK Unmodified 879.46029 0.46028724 1680 P52209 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes yes 0 0 0 By MS/MS 10 0 1 1 38.219 38.958 2 0.048866 42179 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.776 55.763 16688000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16688000 10400 1680 9477 88491 70786 70786 1 EAYDSTLPLIK Unmodified 1248.6602 0.66016884 2809 Q5VT25 CDC42BPA Serine/threonine-protein kinase MRCK alpha yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 74.569 74.64 2 0.025298 86311 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 40.724 24.521 23362000 0 0 0 2264100 0 0 3124100 1002300 0 3115700 0 0 3951700 5214500 4689100 10401 2809 9478 88492;88493;88494;88495;88496;88497;88498 70787 70787 1 EAYEQLLQTENLSAQVK Unmodified 1962.9898 0.98983583 294 O15550 KDM6A Lysine-specific demethylase 6A yes yes 0 0 0 By MS/MS 2 0 1 1 82.821 78.116 2 0.042033 97127 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 53.479 39.816 18530000 0 18530000 0 0 0 0 0 0 0 0 0 0 0 0 0 10402 294 9479 88499 70788 70788 1 EAYGAVTQTVR Unmodified 1193.6041 0.60405094 2500 Q15126 PMVK Phosphomevalonate kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.813 36.994 2 0.0051903 40615 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 59.645 46.834 264220000 0 0 0 16216000 13863000 23368000 19429000 17569000 12964000 31535000 21403000 28821000 30167000 17447000 31433000 10403 2500 9480 88500;88501;88502;88503;88504;88505;88506;88507;88508;88509;88510;88511 70789;70790;70791;70792 70791 3 EAYIAMGQR Unmodified 1037.4964 0.49641475 1241 P29083 GTF2E1 General transcription factor IIE subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 38.903 39.11 2 0.0089715 42250 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.081 44.06 44625000 0 0 0 0 4767800 0 5584900 6424400 0 0 8701400 0 0 4991200 14155000 10404 1241 9481 88512;88513;88514;88515;88516;88517 70793;70794 70793 2 EAYIAMGQR Oxidation (M) 1053.4913 0.49132937 1241 P29083 GTF2E1 General transcription factor IIE subunit 1 yes yes 0 1 0 By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 21.297 21.498 2 0.019113 21150 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 48.756 9.9495 36445000 0 0 0 0 2582300 4140400 3780300 0 3679400 4258100 4999700 6037800 4928100 2038500 0 10405 1241 9481 88518;88519;88520;88521;88522;88523;88524;88525;88526 70795 70795 1834 1 EAYNQGLK Unmodified 921.4556 0.45559579 601 O94906 PRPF6 Pre-mRNA-processing factor 6 yes yes 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 16.616 17.131 2 0.023059 16632 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 60.648 26.91 14534000 0 0 0 0 0 0 0 0 0 0 3958000 6412700 0 0 4163400 10406 601 9482 88527;88528;88529 70796 70796 1 EAYPDHTQFEK Unmodified 1363.6044 0.60444487 4787 Q9P016 THYN1 Thymocyte nuclear protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 2 2 4 34.067 29.484 2;3 0.00097141 38917 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.962 66.217 133470000 0 133470000 0 0 0 0 0 0 0 0 0 0 0 0 0 10407 4787 9483 88530;88531;88532;88533 70797;70798 70797 0 EAYPEEAYIADLDAK Unmodified 1696.7832 0.7831971 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.53 1.82 1 1 30 2 2 2 2 4 4 4 2 2 3 1 2 2 79.29 79.12 2;3 6.8595E-28 91426 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 138.45 134.69 5527500000 0 46812000 0 59551000 341200000 298660000 745960000 1448900000 1276100000 298070000 340800000 540920000 12075000 22588000 95821000 10408 1714 9484 88534;88535;88536;88537;88538;88539;88540;88541;88542;88543;88544;88545;88546;88547;88548;88549;88550;88551;88552;88553;88554;88555;88556;88557;88558;88559;88560;88561;88562;88563;88564;88565 70799;70800;70801;70802;70803;70804;70805;70806;70807;70808;70809;70810;70811;70812;70813;70814;70815;70816;70817;70818;70819;70820;70821;70822;70823;70824;70825;70826;70827;70828;70829;70830;70831;70832;70833;70834 70802 33 EAYPGDVFYLHSR Unmodified 1552.731 0.73104237 1192 P25705 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.528 70.598 3 0.0046351 81993 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 38.028 30.658 94316000 0 0 0 11628000 5230300 7024000 5119400 10155000 5224500 7146800 6974600 12570000 6055200 6269200 10919000 10409 1192 9485 88566;88567;88568;88569;88570;88571;88572;88573;88574;88575;88576;88577 70835;70836;70837;70838;70839;70840 70840 6 EAYTAVVYHNR Unmodified 1321.6415 0.64149908 3933 Q96N67 DOCK7 Dedicator of cytokinesis protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 2 2 2 2 1 2 1 1 2 36.534 36.737 2;3 0.0064345 40718 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 56.563 15.534 87661000 0 0 0 0 2156100 11464000 11614000 0 7837200 13431000 1108500 12754000 2890700 9802700 14603000 10410 3933 9486 88578;88579;88580;88581;88582;88583;88584;88585;88586;88587;88588;88589;88590;88591;88592;88593 70841;70842;70843;70844;70845;70846;70847;70848;70849 70846 8 EAYTHAQISRNNELK Unmodified 1772.8806 0.88056015 2310 Q13535 ATR Serine/threonine-protein kinase ATR yes yes 0 0 1 By MS/MS 2 0 1 1 34.936 28.589 3 0.00036129 40270 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.98 58.862 14343000 14343000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10411 2310 9487 88594 70850 70850 1 EAYVNANQAR Unmodified 1134.5418 0.54178503 4143 Q9BTE3 MCMBP Mini-chromosome maintenance complex-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 8.67 2.98 1 5 1 1 1 1 1 1 19.526 19.181 2 0.0006511 19934 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 122.13 98.173 90394000 0 33036000 0 0 0 0 0 6470400 0 15073000 0 11143000 8556900 0 16116000 10412 4143 9488 88595;88596;88597;88598;88599;88600 70851;70852;70853;70854 70851 4 ECADLWPR Unmodified 1045.4651 0.46511462 1913 P62829 RPL23 60S ribosomal protein L23 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 54.981 54.648 2 0.0097801 61680 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 81.784 56.334 767400000 0 82520000 0 0 40481000 45359000 0 56350000 39664000 74377000 90715000 85043000 79235000 72457000 101200000 10413 1913 9489 88601;88602;88603;88604;88605;88606;88607;88608;88609;88610;88611 70855;70856;70857;70858;70859;70860;70861;70862;70863;70864;70865;70866;70867;70868;70869 70868 15 ECADLWPRIASNAGSIA Unmodified 1829.873 0.87303193 1913 P62829 RPL23 60S ribosomal protein L23 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 87.013 83.514 2 2.1419E-62 103765 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 165.35 151.69 484520000 0 474490000 10031000 0 0 0 0 0 0 0 0 0 0 0 0 10414 1913 9490 88612;88613;88614 70870;70871;70872;70873 70870 4 ECAPTPAPVTR Unmodified 1197.5812 0.58120701 2972 Q6UB99 ANKRD11 Ankyrin repeat domain-containing protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.722 29.815 2 0.00033356 32274 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 96.331 86.815 21634000 0 0 0 0 1755400 1552100 2739100 2302500 1768300 3483900 0 0 4194800 3837500 0 10415 2972 9491 88615;88616;88617;88618;88619;88620;88621;88622;88623;88624;88625;88626 70874;70875;70876;70877;70878;70879;70880;70881;70882;70883;70884;70885;70886 70883 13 ECDNALRELETVR Unmodified 1603.7624 0.76241885 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.51 65.598 3 3.1676E-05 74257 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.879 64.098 153910000 0 0 0 6995500 5281100 16242000 8199100 7771100 7756200 14019000 14601000 16444000 11963000 15443000 29195000 10416 5187 9492 88627;88628;88629;88630;88631;88632;88633;88634;88635;88636;88637;88638 70887;70888;70889;70890;70891;70892;70893;70894;70895 70889 6 ECFESLSK Unmodified 998.4379 0.43789681 1418 P40692 MLH1 DNA mismatch repair protein Mlh1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 35.123 34.554 2 0.014419 43830 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 135.77 116.13 197510000 0 102790000 0 4792400 5226200 0 5898400 6004000 5925400 11183000 11537000 11219000 8988400 8509700 15437000 10417 1418 9493 88639;88640;88641;88642;88643;88644;88645;88646;88647;88648;88649;88650;88651 70896;70897;70898;70899;70900;70901 70897 5 ECFLIQPK Unmodified 1033.5267 0.52665224 4090 Q9BQ75 CMSS1 Protein CMSS1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 60.598 59.445 2 0.012102 76988 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.74 71.844 40575000 0 22670000 0 0 0 0 0 0 0 0 0 5345000 0 5206000 7354100 10418 4090 9494 88652;88653;88654;88655 70902;70903;70904;70905 70903 4 ECFYQPMPLK Unmodified 1311.5992 0.59916526 5147 Q9Y3A6 TMED5 Transmembrane emp24 domain-containing protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 71.011 70.316 2 0.0040275 88353 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.57 77.394 163760000 0 126100000 0 3117300 2055800 3764900 2923800 3868700 0 3383700 4879000 6587800 3932500 3154500 0 10419 5147 9495 88656;88657;88658;88659;88660;88661;88662;88663;88664;88665;88666;88667 70906;70907;70908 70906 3 ECGQLLISENQK Unmodified 1417.6871 0.68712864 3244 Q8IWS0 PHF6 PHD finger protein 6 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 49.964 44.663 2 2.592E-22 57699 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 163.65 144.56 137460000 0 137460000 0 0 0 0 0 0 0 0 0 0 0 0 0 10420 3244 9496 88668;88669 70909 70909 1 ECGVTAAFDASR Unmodified 1282.5612 0.56119985 5293 Q9Y6R0 NUMBL Numb-like protein yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 48.041 48.222 2 0.0012231 53382 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.65 60.738 30002000 0 0 0 0 3138100 0 2764200 3197800 0 4411300 4129500 0 0 5153900 7206800 10421 5293 9497 88670;88671;88672;88673;88674;88675;88676;88677 70910;70911;70912;70913;70914;70915;70916 70912 7 ECHLNADTVSSK Unmodified 1359.6089 0.60887832 1937 P63010 AP2B1 AP-2 complex subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 7.71 3.58 6 1 17 2 3 2 2 2 2 2 1 2 1 2 1 1 1 19.962 18.938 2;3 0.0022534 19676 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 63.624 58.659 677930000 27052000 452690000 10631000 24499000 18984000 38120000 19770000 2055100 21763000 0 4508000 41139000 4489900 4506100 7721800 10422 1937 9498 88678;88679;88680;88681;88682;88683;88684;88685;88686;88687;88688;88689;88690;88691;88692;88693;88694;88695;88696;88697;88698;88699;88700;88701 70917;70918;70919;70920;70921;70922;70923;70924;70925;70926;70927;70928 70917 10 ECISSQSSDPK Unmodified 1236.5292 0.52923102 3698 Q92994 BRF1 Transcription factor IIIB 90 kDa subunit yes yes 0 0 0 By MS/MS 10 0 1 1 11.316 11.18 2 0.02878 10043 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 39.305 31.737 1326100 0 0 0 1326100 0 0 0 0 0 0 0 0 0 0 0 10423 3698 9499 88702 70929 70929 1 ECLEVIPPCK Unmodified 1243.5941 0.59407988 1696 P52735 VAV2 Guanine nucleotide exchange factor VAV2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 62.219 56.881 2 0.019309 73114 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.819 63.896 50355000 0 50355000 0 0 0 0 0 0 0 0 0 0 0 0 0 10424 1696 9500 88703;88704 70930 70930 0 ECLPENLGGYVK Unmodified 1377.6599 0.65985126 1479 P43378 PTPN9 Tyrosine-protein phosphatase non-receptor type 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.211 69.289 2 0.0073779 79555 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 61.65 29.715 41157000 0 0 0 1673100 2344000 3760900 1786000 2836000 1911500 4071700 3840700 6861100 2966100 2826400 6279700 10425 1479 9501 88705;88706;88707;88708;88709;88710;88711;88712;88713;88714;88715;88716 70931;70932 70932 2 ECPDQLGPSPK Unmodified 1226.5601 0.56013721 2551 Q15596 NCOA2 Nuclear receptor coactivator 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 28.842 29.085 2 0.0074255 30290 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 54.066 42.902 9455200 0 0 0 0 0 0 0 3814600 0 0 0 0 0 5640700 0 10426 2551 9502 88717;88718;88719 70933;70934;70935 70934 3 ECPEIGPFAGRGQK Unmodified 1544.7406 0.7405612 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 54.583 48.532 3 0.011166 66505 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 38.189 28.401 19478000 14759000 0 4719000 0 0 0 0 0 0 0 0 0 0 0 0 10427 3443 9503 88720;88721 70936 70936 1 ECPIPNVQNSPIPAK Unmodified 1662.8399 0.83994089 2651 Q2M2I8 AAK1 AP2-associated protein kinase 1 yes yes 0 0 0 By MS/MS 2 0 1 1 70.586 64.77 2 0.017275 82402 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 61.344 45.804 14214000 0 14214000 0 0 0 0 0 0 0 0 0 0 0 0 0 10428 2651 9504 88722 70937 70937 1 ECPSVLEYK Unmodified 1123.522 0.52196079 5261 Q9Y617 PSAT1 Phosphoserine aminotransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 47.041 47.512 2 0.019674 52401 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.775 42.909 21929000 0 0 0 0 0 0 0 0 0 0 5070200 0 0 3152900 13706000 10429 5261 9505 88723;88724;88725 70938 70938 1 ECQSLRLELEK Unmodified 1403.7079 0.70786408 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 1 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 51.002 51.331 3 0.034617 56877 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.643 25.012 102440000 0 0 0 0 0 0 0 7369500 0 26849000 0 0 26706000 0 41515000 10430 965 9506 88726;88727;88728;88729 70939 70939 0 ECSAGLDSNEMSLQEK Unmodified 1796.7557 0.75567849 3100 Q7Z4Q2 HEATR3 HEAT repeat-containing protein 3 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 49.589 49.958 2 0.011591 56596 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 47.915 45.598 10337000 0 0 0 0 0 0 0 0 0 0 4721000 0 5615700 0 0 10431 3100 9507 88730;88731 70940 70940 1 ECSIYLIGGSIPEEDAGK Unmodified 1936.9088 0.90880832 4573 Q9NQR4 NIT2 Omega-amidase NIT2 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 6.71 3.81 2 1 4 1 2 1 1 1 1 82.071 79.775 2 3.1755E-48 99946 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 139.89 126.46 330720000 12266000 294040000 0 2062500 0 0 0 0 0 0 0 5987000 0 3693100 12670000 10432 4573 9508 88732;88733;88734;88735;88736;88737;88738 70941;70942;70943;70944;70945 70944 5 ECSLQVPEDELVSTLK Unmodified 1845.903 0.90299466 948 P11441 UBL4A Ubiquitin-like protein 4A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 1 1 1 2 2 2 2 2 2 1 2 83.335 83.432 2;3 1.6418E-31 96232 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 148.96 140.55 159700000 0 0 0 1285700 5488600 2619400 4290200 11688000 10513000 19422000 20658000 28285000 13049000 12843000 29554000 10433 948 9509 88739;88740;88741;88742;88743;88744;88745;88746;88747;88748;88749;88750;88751;88752;88753;88754;88755;88756;88757 70946;70947;70948;70949;70950;70951;70952;70953;70954;70955;70956;70957;70958;70959;70960 70950 15 ECSNPSNLLELYTQAILDMTYFEENK Unmodified 3121.426 0.42601808 25 A6NDU8 C5orf51 UPF0600 protein C5orf51 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 105.35 101.14 3 1.5952E-08 124933 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.435 63.34 9897000 0 9897000 0 0 0 0 0 0 0 0 0 0 0 0 0 10434 25 9510 88758;88759 70961;70962;70963 70962 3 ECSPWMSDFK Oxidation (M) 1301.5057 0.5056588 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS 7.33 3.77 3 6 1 1 1 1 1 1 1 1 1 59.196 57.261 2 0.0025358 73757 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.442 99.442 548070000 15402000 478910000 4239000 0 4285900 0 5177100 0 0 7029500 12218000 0 10705000 10096000 0 10435 1986 9511 88760;88761;88762;88763;88764;88765;88766;88767;88768 70964;70965;70966;70967 70964 3215 4 ECSPWMSDFK Unmodified 1285.5107 0.51074418 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 72.027 70.864 2 0.010224 89524 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.731 81.118 662990000 14441000 528260000 3683200 3707100 4492400 7454500 4223900 7967300 4256700 7006600 11797000 11436000 9208100 12828000 32230000 10436 1986 9511 88769;88770;88771;88772;88773;88774;88775;88776;88777;88778;88779;88780;88781;88782;88783;88784 70968;70969;70970;70971;70972;70973;70974 70969 7 ECVAPHMADIGSVTSSASGPAQSVAK Unmodified 2556.1948 0.19483636 2739 Q5JTH9 RRP12 RRP12-like protein yes yes 0 0 0 By MS/MS 2 0 1 1 73.978 68.823 3 0.045558 86519 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 17.65 9.8466 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10437 2739 9512 88785 70975 70975 1 ECVLPGGETAGDMGK Oxidation (M) 1535.6596 0.65959326 1474 P43246 MSH2 DNA mismatch repair protein Msh2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39.289 38.594 2 2.7032E-10 43425 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 96.229 88.584 148280000 9202600 16614000 0 5180400 6154400 12367000 7735800 6098600 7483900 14716000 15958000 12485000 11764000 9225400 13300000 10438 1474 9513 88786;88787;88788;88789;88790;88791;88792;88793;88794;88795;88796;88797;88798;88799 70976;70977;70978;70979;70980;70981;70982;70983;70984;70985;70986;70987;70988;70989;70990 70976 2317 15 ECVLPGGETAGDMGK Unmodified 1519.6647 0.66467864 1474 P43246 MSH2 DNA mismatch repair protein Msh2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 53.398 48.984 2 1.1042E-09 56063 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.011 77.381 67615000 7221200 29519000 0 0 0 0 0 0 0 0 0 0 0 0 30875000 10439 1474 9513 88800;88801;88802;88803;88804;88805 70991;70992;70993;70994;70995;70996 70994 6 ECVSCVFINGVGHLLRFHESLDK Unmodified 2715.3261 0.3261253 5334 yes yes 0 0 1 By MS/MS 2 0 1 1 92.135 84.005 3 0.010282 108931 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 19.722 0.17298 + 11794000 11794000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10440 5334 9514 88806 70997 70997 1 ECVTFAADEPVYIAGQQAFFNYSTSK Unmodified 2942.3433 0.34327473 3567 Q8WVV9 HNRNPLL Heterogeneous nuclear ribonucleoprotein L-like yes yes 0 0 0 By MS/MS 3 0 1 1 94.701 91.461 3 0.00080707 109562 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 34.418 32.074 2794000 0 2794000 0 0 0 0 0 0 0 0 0 0 0 0 0 10441 3567 9515 88807 70998 70998 1 ECYLEGDQTSLYHAAK Unmodified 1883.836 0.83597772 3742 Q96AX1 VPS33A Vacuolar protein sorting-associated protein 33A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 7 3.69 1 1 3 2 1 1 1 56.425 54.427 3 2.8042E-16 70146 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.65 110.63 74836000 0 62707000 0 0 0 0 3094800 0 0 0 3499100 0 0 5535700 0 10442 3742 9516 88808;88809;88810;88811;88812 70999;71000;71001;71002;71003;71004 70999 6 EDAAGTSGLGELNSR Unmodified 1475.6852 0.68521439 2773 Q5T3I0 GPATCH4 G patch domain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 44.21 44.958 2 0.00019335 49335 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.815 60.128 12736000 0 0 0 0 0 0 0 0 0 0 0 5313900 0 0 7422400 10443 2773 9517 88813;88814 71005;71006 71005 2 EDAANNYAR Unmodified 1022.4417 0.44173664 1961;3031;4093;1962 P68363;A6NHL2;Q71U36;P0DPH8;P0DPH7;Q9NY65;Q9BQE3;P68366 TUBA1B;TUBAL3;TUBA1A;TUBA8;TUBA1C;TUBA4A Tubulin alpha-1B chain;Tubulin alpha chain-like 3;Tubulin alpha-1A chain;Tubulin alpha-8 chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.53 3.84 2 3 12 2 2 1 1 1 1 1 1 1 1 2 1 1 1 21.559 21.469 2 3.9E-14 8849 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 170.32 165.47 6008100000 89688000 334610000 2224400 377470000 305930000 561010000 543740000 473040000 376590000 450740000 627470000 614700000 509170000 0 741710000 10444 1961;3031;4093;1962 9518 88815;88816;88817;88818;88819;88820;88821;88822;88823;88824;88825;88826;88827;88828;88829;88830;88831 71007;71008;71009;71010;71011;71012;71013;71014;71015;71016;71017;71018;71019;71020;71021 71007 13 EDAANNYARGHYTIGK Unmodified 1778.8336 0.83360996 1961;3031;4093;1962 P68363;Q71U36;P0DPH8;P0DPH7;Q9BQE3;P68366 TUBA1B;TUBA1A;TUBA1C;TUBA4A Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain no no 0 0 1 By MS/MS By MS/MS By MS/MS 2.2 0.4 8 2 6 2 2 39.769 34.362 3;4 0.00044993 43283 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 80.534 62.733 7458700000 6268500000 323940000 866300000 0 0 0 0 0 0 0 0 0 0 0 0 10445 1961;3031;4093;1962 9519 88832;88833;88834;88835;88836;88837;88838;88839;88840;88841 71022;71023;71024;71025;71026;71027;71028;71029;71030;71031;71032;71033;71034 71033 12 EDAATFSSLR Unmodified 1095.5197 0.51965261 3495;3843 Q8TD16;Q96G01 BICD2;BICD1 Protein bicaudal D homolog 2;Protein bicaudal D homolog 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 46.529 46.864 2 0.0065119 52785 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 64.711 45.936 4776600 0 0 0 0 0 0 0 0 0 0 0 0 4776600 0 0 10446 3495;3843 9520 88842;88843;88844;88845 71035;71036;71037;71038 71036 4 EDAEAPGIR Unmodified 956.45632 0.45632407 1674 P51858 HDGF Hepatoma-derived growth factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 22.284 22.691 2 0.0067752 22523 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 74.184 57.727 88474000 0 0 0 0 0 0 0 0 2213400 0 22158000 0 0 16860000 47242000 10447 1674 9521 88846;88847;88848;88849 71039;71040;71041;71042 71042 3 EDAEAPGIRDHESL Unmodified 1537.7009 0.70086445 1674 P51858 HDGF Hepatoma-derived growth factor yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.9 3.81 12 4 24 6 7 3 2 2 2 2 2 2 2 2 2 2 2 2 42.837 40.971 2;3 1.3748E-28 50596 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 178.67 176.05 4846900000 520300000 2460500000 128380000 41553000 51237000 71597000 38473000 72747000 46923000 66449000 265600000 262090000 67335000 144520000 609180000 10448 1674 9522 88850;88851;88852;88853;88854;88855;88856;88857;88858;88859;88860;88861;88862;88863;88864;88865;88866;88867;88868;88869;88870;88871;88872;88873;88874;88875;88876;88877;88878;88879;88880;88881;88882;88883;88884;88885;88886;88887;88888;88889 71043;71044;71045;71046;71047;71048;71049;71050;71051;71052;71053;71054;71055;71056;71057;71058;71059;71060;71061;71062;71063;71064;71065;71066;71067;71068;71069;71070;71071;71072;71073;71074 71057 24 EDAFYSWESSK Unmodified 1347.5619 0.56191135 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 64.568 63.675 2 1.489E-05 72828 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 127.76 105.53 408750000 0 169190000 1658400 0 0 56067000 14860000 19812000 30817000 30545000 0 32098000 0 0 53700000 10449 2102 9523 88890;88891;88892;88893;88894;88895;88896;88897;88898 71075;71076;71077;71078;71079;71080;71081;71082 71080 5 EDAFYSWESSKDPAEQQGK Unmodified 2200.9549 0.95490689 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 61.602 60.931 3 1.1134E-46 68783 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 99.413 94.411 336840000 0 37717000 0 13009000 12411000 10247000 23173000 28380000 11515000 27597000 31891000 41315000 28655000 26986000 43940000 10450 2102 9524 88899;88900;88901;88902;88903;88904;88905;88906;88907;88908;88909;88910;88911;88912 71083;71084;71085;71086;71087;71088;71089;71090;71091;71092;71093;71094;71095;71096;71097 71093 15 EDAGGMIQR Oxidation (M) 991.43929 0.4392938 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 1 2 2 2 2 1 2 10.003 10.135 2 0.003243 8587 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 85.265 73.544 136900000 0 0 0 9518700 7989400 15008000 11003000 8778800 4519100 13492000 10392000 20363000 15059000 4722700 16058000 10451 3641 9525 88913;88914;88915;88916;88917;88918;88919;88920;88921;88922;88923;88924;88925;88926;88927;88928;88929;88930;88931;88932;88933;88934 71098;71099;71100;71101;71102;71103;71104;71105;71106;71107;71108;71109;71110;71111;71112;71113;71114 71113 5145 15 EDAGGMIQR Unmodified 975.44438 0.44437918 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.776 22.982 2 0.0042856 23538 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 87.323 66.802 230620000 0 0 0 12241000 11144000 16577000 11109000 15476000 8452700 22706000 21964000 29432000 20416000 22691000 38414000 10452 3641 9525 88935;88936;88937;88938;88939;88940;88941;88942;88943;88944;88945;88946 71115;71116;71117;71118;71119;71120;71121;71122;71123;71124;71125 71123 11 EDAGWYTVSAK Unmodified 1225.5615 0.56151742 3581 Q8WX93 PALLD Palladin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 52.03 51.72 2 0.00048101 57489 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.869 47.473 404570000 0 209840000 0 8949500 8768400 13793000 11643000 13007000 11009000 18120000 20209000 18301000 18026000 20990000 31914000 10453 3581 9526 88947;88948;88949;88950;88951;88952;88953;88954;88955;88956;88957;88958;88959 71126;71127;71128;71129;71130;71131;71132;71133;71134;71135;71136;71137;71138;71139;71140 71130 14 EDAIEHFMK Oxidation (M) 1134.5016 0.5015597 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 34.37 32.926 2 0.006368 36034 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.073 59.249 119700000 8601700 53164000 21787000 0 0 6099000 0 0 2975400 0 7489100 7030200 6770700 5787500 0 10454 894 9527 88960;88961;88962;88963;88964;88965;88966;88967;88968;88969;88970 71141;71142;71143;71144;71145 71141 1147 3 EDAIEHFMK Unmodified 1118.5066 0.50664508 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 54.787 53.588 2 0.014718 68375 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 125.58 96.208 261590000 0 92364000 32350000 0 0 33927000 0 8215800 0 26735000 0 0 0 17117000 50885000 10455 894 9527 88971;88972;88973;88974;88975;88976;88977 71146;71147;71148;71149 71148 3 EDALICFEEHIR Unmodified 1530.7137 0.71367774 494;2902 O75400;Q6NWY9 PRPF40A;PRPF40B Pre-mRNA-processing factor 40 homolog A;Pre-mRNA-processing factor 40 homolog B no no 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 79.498 79.632 3 0.012709 91705 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.725 29.937 22448000 0 0 0 0 0 2587000 0 0 3239800 3321200 0 2434300 0 0 10866000 10456 494;2902 9528 88978;88979;88980;88981;88982 71150 71150 1 EDALICFEEHIRALEK Unmodified 1971.9724 0.97241163 494 O75400 PRPF40A Pre-mRNA-processing factor 40 homolog A yes yes 0 0 1 By MS/MS 1.5 0.5 1 1 2 102.86 101.43 3 0.003899 95942 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 52.569 43.039 27545000 27545000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10457 494 9529 88983;88984 71151;71152 71151 2 EDALNLSVPR Unmodified 1112.5826 0.58258722 4814 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.4 64.491 2 0.001849 73948 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 88.181 58.514 219440000 0 0 0 12691000 12267000 13369000 15689000 16290000 13066000 20056000 17962000 30828000 22503000 18090000 26630000 10458 4814 9530 88985;88986;88987;88988;88989;88990;88991;88992;88993;88994;88995;88996 71153;71154;71155;71156;71157;71158;71159;71160;71161;71162;71163;71164 71161 11 EDAMAMVDHCLK Unmodified 1418.5992 0.59924161 1473 P43243 MATR3 Matrin-3 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 63.113 63.498 3 0.0028977 71807 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.175 52.076 17264000 0 0 0 0 0 0 0 0 0 0 0 0 0 7825400 9438600 10459 1473 9531 88997;88998 71165;71166 71165 2 EDAMVEFVK Unmodified 1066.5005 0.50049707 4382 Q9H3P7 ACBD3 Golgi resident protein GCP60 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 65.169 63.39 2 0.0085907 80855 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.698 74.922 401630000 13357000 342260000 0 0 0 0 0 0 0 8189800 8742400 6675300 6071100 0 16336000 10460 4382 9532 88999;89000;89001;89002;89003;89004;89005 71167;71168;71169;71170;71171 71168 5 EDAMVEFVK Oxidation (M) 1082.4954 0.49541169 4382 Q9H3P7 ACBD3 Golgi resident protein GCP60 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 49.127 43.297 2 0.014193 56574 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.165 47.811 131540000 7050500 121740000 2748000 0 0 0 0 0 0 0 0 0 0 0 0 10461 4382 9532 89006;89007;89008 71172;71173;71174 71173 5837 3 EDAPIGPHLQSMPSEQIR Unmodified 2003.9735 0.97347426 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 66.504 66.651 3 0.015587 76509 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 33.405 26.304 21791000 0 0 0 0 0 9440700 0 4831100 0 3918000 3601100 0 0 0 0 10462 2378 9533 89009;89010;89011;89012 71175;71176 71176 1 EDAVREAQK Unmodified 1044.52 0.51998696 2033 Q00341 HDLBP Vigilin yes yes 0 0 1 By matching By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 6.8905 3.807 2 1.0002E-30 5666 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 207.29 127.06 726480000 5306200 633390000 87782000 0 0 0 0 0 0 0 0 0 0 0 0 10463 2033 9534 89013;89014;89015;89016 71177;71178;71179 71177 2 EDCFFYSLVFDPVQK Unmodified 1892.8655 0.86548694 583 O94776 MTA2 Metastasis-associated protein MTA2 yes yes 0 0 0 By MS/MS 2 0 1 1 98.832 90.701 3 0.00093534 117014 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.276 48.635 7424100 7424100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10464 583 9535 89017 71180 71180 0 EDDALWPPPDR Unmodified 1309.5939 0.59388018 3734;1846 Q96A72;P61326 MAGOHB;MAGOH Protein mago nashi homolog 2;Protein mago nashi homolog no no 0 0 0 By MS/MS 10 0 1 1 64.18 64.743 2 0.0091046 73385 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.148 70.616 7450000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7450000 10465 3734;1846 9536 89018 71181 71181 0 EDDALWPPPDRVGRQELEIVIGDEHISFTTSK Unmodified 3648.806 0.80600481 3734;1846 Q96A72;P61326 MAGOHB;MAGOH Protein mago nashi homolog 2;Protein mago nashi homolog no no 0 0 2 By MS/MS 2.33 0.471 2 1 3 96.088 89.5 4;5 8.4848E-13 114465 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.577 50.873 169380000 169380000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10466 3734;1846 9537 89019;89020;89021 71182;71183;71184 71184 2 EDDAPRTIACPHK Unmodified 1508.7042 0.70417569 1190 P25490 YY1 Transcriptional repressor protein YY1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 23.884 20.362 3 0.0089264 25626 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 52.555 38.297 22962000 0 9358900 13603000 0 0 0 0 0 0 0 0 0 0 0 0 10467 1190 9538 89022;89023 71185 71185 1 EDDEDKDEDEEDEEDK Unmodified 1982.6872 0.68724362 1225 P27797 CALR Calreticulin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 7.3362 7.5006 3 2.0303E-28 5532 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 151.8 119.28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10468 1225 9539 89024;89025;89026;89027 71186;71187;71188;71189 71188 4 EDDELIREVYEYWIK Unmodified 1998.9575 0.95747307 4364 Q9H2F5 EPC1 Enhancer of polycomb homolog 1 yes yes 0 0 1 By MS/MS 2 0 1 1 99.716 91.586 3 0.00031725 118021 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.908 72.985 14184000 14184000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10469 4364 9540 89028 71190 71190 1 EDDEYEAFRK Unmodified 1300.5572 0.55716033 3251 Q8IWZ8 SUGP1 SURP and G-patch domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 32.601 32.799 3 0.0090398 36136 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 33.744 25.857 81424000 0 0 0 2933600 4720600 7728700 0 7462700 6051700 7380100 9975800 10332000 7256100 6728000 10855000 10470 3251 9541 89029;89030;89031;89032;89033;89034;89035;89036;89037;89038;89039 71191;71192;71193;71194;71195 71195 5 EDDLDVVLSPQRR Unmodified 1540.7845 0.7845345 4596 Q9NRA8 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter yes yes 0 0 1 By matching By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 64.023 64.122 3 0.017476 72609 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 24.191 18.507 24640000 0 0 0 2266300 0 6571500 0 0 0 0 0 8205700 0 3577400 4018600 10471 4596 9542 89040;89041;89042;89043;89044 71196;71197 71196 2 EDDLGAVEEQR Unmodified 1259.563 0.56297399 4222 Q9BXB4 OSBPL11 Oxysterol-binding protein-related protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 36.158 36.33 2 7.7828E-05 40184 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 111.65 89.504 41736000 0 0 0 2703500 0 4567600 3494800 3384200 3852000 4446800 4317600 0 0 7683000 7286600 10472 4222 9543 89045;89046;89047;89048;89049;89050;89051;89052;89053;89054;89055 71198;71199;71200;71201;71202;71203;71204;71205;71206;71207;71208 71199 11 EDDLNSFNATDLK Unmodified 1480.6682 0.66816734 896 P09960 LTA4H Leukotriene A-4 hydrolase yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.9 3.81 3 1 6 1 2 1 1 1 1 1 1 1 66.598 64.443 2 3.8907E-64 80499 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 247.31 225.86 574160000 38591000 433990000 3181400 2544800 0 0 0 0 0 0 19760000 12032000 4478200 10991000 48595000 10473 896 9544 89056;89057;89058;89059;89060;89061;89062;89063;89064;89065 71209;71210;71211;71212;71213;71214;71215;71216 71209 8 EDDMETK Oxidation (M) 882.32768 0.32767766 5221 Q9Y570 PPME1 Protein phosphatase methylesterase 1 yes yes 0 1 0 By MS/MS 1 0 1 1 106.52 111.78 2 0.037198 92479 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 79.451 57.749 24588000 24588000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10474 5221 9545 89066 71217 71217 1 EDDRISRPHPSTAESK Unmodified 1823.8762 0.87620306 3029 Q71RC2 LARP4 La-related protein 4 yes yes 0 0 2 By MS/MS By matching By matching By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 13.718 13.994 4 0.046241 12873 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 27.526 14.355 38488000 0 0 0 0 0 5187100 0 0 5206700 10748000 5048900 1379400 0 0 10917000 10475 3029 9546 89067;89068;89069;89070;89071;89072 71218 71218 1 EDDSSASTSQSTRAASIFGGAK Unmodified 2171.9931 0.99308331 1166 P23588 EIF4B Eukaryotic translation initiation factor 4B yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 56.172 49.881 3 6.8623E-07 67436 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.535 66.205 50132000 19511000 30621000 0 0 0 0 0 0 0 0 0 0 0 0 0 10476 1166 9547 89073;89074;89075 71219;71220;71221;71222 71222 4 EDDVPQFTSAGENFDK Unmodified 1797.7693 0.76933795 1240 P28838 LAP3 Cytosol aminopeptidase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 6 4 2 2 1 1 1 1 71.373 66.958 2 0.00032255 84661 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.417 87.112 84260000 6090000 67872000 0 0 0 0 0 0 0 0 0 0 0 0 10298000 10477 1240 9548 89076;89077;89078;89079 71223;71224;71225;71226 71223 4 EDDVRQYVVR Unmodified 1277.6364 0.6364137 1909 P62753 RPS6 40S ribosomal protein S6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 39.864 40.016 3 0.00045798 45076 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 105.4 79.354 313790000 0 0 0 25479000 19750000 16895000 31516000 22542000 21991000 40315000 49314000 48489000 0 0 37504000 10478 1909 9549 89080;89081;89082;89083;89084;89085;89086;89087;89088;89089 71227;71228;71229;71230;71231;71232;71233;71234;71235;71236 71236 9 EDDVRQYVVRK Unmodified 1405.7314 0.73137672 1909 P62753 RPS6 40S ribosomal protein S6 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.932 32.119 3 0.0050056 33779 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.379 70.798 219840000 0 0 0 9429100 9067300 18456000 14879000 13124000 27416000 17302000 15223000 29071000 18093000 17806000 29976000 10479 1909 9550 89090;89091;89092;89093;89094;89095;89096;89097;89098;89099;89100;89101 71237;71238;71239;71240;71241;71242;71243;71244;71245;71246;71247 71240 4 EDEDPQDGGSLASTLSK Unmodified 1747.7748 0.77481726 4968 Q9UKJ3 GPATCH8 G patch domain-containing protein 8 yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 52.276 52.54 2 0.00023046 59364 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 84.718 67.282 33084000 0 0 0 0 0 3329600 3081200 0 2208200 3801400 5736300 7109100 7818000 0 0 10480 4968 9551 89102;89103;89104;89105;89106;89107;89108;89109 71248;71249;71250;71251;71252;71253 71250 6 EDEEEDDDVVAPKPPIEPEEEK Unmodified 2537.1181 0.11806863 2281 Q13409 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.21 3.75 4 1 9 3 1 1 1 1 1 1 1 1 1 1 1 62.998 60.937 3 2.4349E-40 79035 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 113.17 105.24 266110000 70873000 103550000 0 6712600 5880300 0 5437200 0 5785500 12015000 13040000 12724000 6936300 0 23162000 10481 2281 9552 89110;89111;89112;89113;89114;89115;89116;89117;89118;89119;89120;89121;89122;89123 71254;71255;71256;71257;71258;71259;71260;71261;71262;71263;71264;71265;71266;71267;71268;71269;71270;71271;71272;71273 71266 20 EDEEEDEPVVIK Unmodified 1429.646 0.64603491 5009 Q9ULW0 TPX2 Targeting protein for Xklp2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 50.015 42.115 2 0.0011403 50333 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.392 74.185 6465000 6465000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10482 5009 9553 89124;89125;89126 71274;71275;71276 71274 3 EDEENTSAADHSEEEK Unmodified 1818.7028 0.70277452 1028 P15923 TCF3 Transcription factor E2-alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 1 2 1 2 2 2 2 2 2 2 7.3878 7.5213 2;3 1.9473E-27 4437 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 121.79 117.17 143560000 0 0 0 5897500 5282600 6745100 7700800 6734600 6165100 9123300 30661000 16730000 12773000 13650000 22095000 10483 1028 9554 89127;89128;89129;89130;89131;89132;89133;89134;89135;89136;89137;89138;89139;89140;89141;89142;89143;89144;89145;89146;89147;89148 71277;71278;71279;71280;71281;71282;71283;71284;71285;71286 71282 8 EDEGAAEAKPEPGR Unmodified 1454.6638 0.66375066 5174 Q9Y3S1 WNK2 Serine/threonine-protein kinase WNK2 yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 11.959 12.106 3 0.017861 9994 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 25.322 16.725 18539000 0 0 0 1792000 0 3181900 1435800 0 958840 2214100 0 2546200 1510300 2051300 2848200 10484 5174 9555 89149;89150;89151;89152;89153;89154;89155;89156;89157 71287 71287 1 EDEGASAAQGQEPEADSQELVQPK Unmodified 2512.1201 0.12013431 502 O75459 PAGE1 P antigen family member 1 yes yes 0 0 0 By MS/MS 10 0 1 1 49.549 49.98 3 5.5772E-08 56322 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 45.011 34.143 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10485 502 9556 89158 71288 71288 1 EDEGEEAASPMLQIQR Unmodified 1801.8152 0.81524228 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 64.657 64.754 2 0.00044398 73537 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.479 67.537 22428000 0 0 0 1273900 0 5124000 0 0 2265600 0 3048300 0 2950800 2928000 4837000 10486 2392 9557 89159;89160;89161;89162;89163;89164;89165 71289;71290;71291 71290 3 EDEGEIQPENK Unmodified 1286.5626 0.56263964 6 A0MZ66 KIAA1598 Shootin-1 yes yes 0 0 0 By MS/MS 10 0 1 1 17.424 17.393 2 0.015027 17578 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 78.516 48.328 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10487 6 9558 89166 71292 71292 1 EDEGEIQPENKEDSIENVRETDSSNC Unmodified 3022.2582 0.25816071 6 A0MZ66 KIAA1598 Shootin-1 yes yes 0 0 2 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 50.534 44.346 3 2.2034E-55 57927 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.04 122.03 36187000 3729300 32457000 0 0 0 0 0 0 0 0 0 0 0 0 0 10488 6 9559 89167;89168;89169 71293;71294;71295 71294 3 EDEGGNEEEAGK Unmodified 1262.4899 0.48986862 2003 P82970 HMGN5 High mobility group nucleosome-binding domain-containing protein 5 yes yes 0 0 0 By MS/MS 1 0 1 1 106.19 111.45 2 0.0044463 92125 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 77.14 68.394 10927000 10927000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10489 2003 9560 89170 71296 71296 1 EDEGVDDVNFRK Unmodified 1421.6423 0.64228694 633 O95243 MBD4 Methyl-CpG-binding domain protein 4 yes yes 0 0 1 By MS/MS By matching 10 0 2 1 1 35.938 36.384 3 0.020554 40266 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 26.659 21.156 12711000 0 0 0 0 0 0 0 4315900 0 0 0 0 0 0 8394900 10490 633 9561 89171;89172 71297 71297 1 EDEIPVLK Unmodified 941.50696 0.50696266 437 O60841 EIF5B Eukaryotic translation initiation factor 5B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 58.264 57.251 2 0.025168 65018 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 58.917 30.019 177310000 9104900 70171000 0 0 3388600 15033000 0 4247800 10772000 10580000 10413000 11232000 8804700 8280400 15280000 10491 437 9562 89173;89174;89175;89176;89177;89178;89179;89180;89181;89182;89183;89184 71298;71299;71300;71301 71301 2 EDEIPVLKDELIHELK Unmodified 1919.0252 0.025158703 437 O60841 EIF5B Eukaryotic translation initiation factor 5B yes yes 0 0 1 By MS/MS 2 0 1 1 90.469 82.338 3 0.017838 106879 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 36.345 32.683 5544000 5544000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10492 437 9563 89185 71302 71302 1 EDEISLEDLIERER Unmodified 1744.8479 0.84792262 3536 Q8WU90 ZC3H15 Zinc finger CCCH domain-containing protein 15 yes yes 0 0 1 By MS/MS 2 0 1 1 89.44 81.309 3 0.0083219 105658 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.625 35.785 4970200 4970200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10493 3536 9564 89186 71303 71303 1 EDEISLEDLIERERSALGPNVTK Unmodified 2612.3293 0.32933923 3536 Q8WU90 ZC3H15 Zinc finger CCCH domain-containing protein 15 yes yes 0 0 2 By MS/MS 2.5 0.5 1 1 2 93.645 87.822 3;4 0.0027393 111960 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.017 41.089 18131000 18131000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10494 3536 9565 89187;89188 71304;71305 71305 2 EDELWASFLNDVGPK Unmodified 1718.8152 0.81516593 4871 Q9UEE9 CFDP1 Craniofacial development protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 98.537 93.802 2 0.046067 116075 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 54.005 40.497 29208000 0 29208000 0 0 0 0 0 0 0 0 0 0 0 0 0 10495 4871 9566 89189 71306 71306 1 EDENVPFLLVGNK Unmodified 1472.7511 0.75110911 940 P11233 RALA Ras-related protein Ral-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 84.165 83.643 2 6.0915E-18 103499 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.41 112.1 201940000 0 64224000 0 6325700 5977100 5913300 9958500 13262000 7719200 14835000 14967000 19418000 10945000 12642000 15749000 10496 940 9567 89190;89191;89192;89193;89194;89195;89196;89197;89198;89199;89200;89201;89202;89203 71307;71308;71309;71310;71311;71312;71313;71314;71315;71316;71317;71318;71319;71320;71321;71322;71323 71310 17 EDEPSVGQVAR Unmodified 1185.5626 0.56258006 4287 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 31.55 31.698 2 0.045746 34833 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 35.908 25.643 10593000 0 0 0 0 0 6270400 0 0 1870700 0 0 0 0 2452100 0 10497 4287 9568 89204;89205;89206 71324 71324 1 EDEPSVGQVARVDVSSK Unmodified 1800.8854 0.88537076 4287 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 54.941 50.078 3 0.016282 64716 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 34.87 24.386 31108000 0 27420000 3688000 0 0 0 0 0 0 0 0 0 0 0 0 10498 4287 9569 89207;89208;89209 71325;71326 71325 2 EDEQQQALQDIASR Unmodified 1629.7594 0.75944196 1613 P49916 LIG3 DNA ligase 3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 58.399 58.711 2 0.0010602 66616 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 61.435 48.859 17875000 0 0 0 0 0 0 3333500 0 0 3563700 3890800 0 0 0 7087000 10499 1613 9570 89210;89211;89212;89213;89214 71327;71328;71329;71330 71328 4 EDETSDGQASGEQEEAGPSSSQAGPSNGVAPLPR Unmodified 3340.4563 0.45634325 4133 Q9BSV6 TSEN34 tRNA-splicing endonuclease subunit Sen34 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 55.116 55.389 3 3.275E-05 62853 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 26.493 24.588 75033000 0 0 0 0 0 8391900 8604600 4036000 4171600 6864600 13100000 9798300 5785000 5413700 8866500 10500 4133 9571 89215;89216;89217;89218;89219;89220;89221;89222;89223;89224 71331;71332;71333;71334;71335;71336;71337;71338 71335 8 EDEVDGEEQTQK Unmodified 1405.5845 0.58449729 4871 Q9UEE9 CFDP1 Craniofacial development protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.79 2.98 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 10.922 10.748 2 5.7054E-62 92146 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 195.79 133.24 76446000 3668600 0 0 2937100 2729600 3782700 4858200 4034600 2930000 4222800 7623000 9842000 7688600 7353900 14775000 10501 4871 9572 89225;89226;89227;89228;89229;89230;89231;89232;89233;89234;89235;89236;89237;89238 71339;71340;71341;71342;71343;71344;71345;71346;71347;71348;71349;71350 71343 12 EDEVEEWQHR Unmodified 1355.5742 0.57420737 1017 P15311 EZR Ezrin yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 2 2 34.365 34.579 2;3 0.00091175 36953 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 114.89 108.97 113510000 0 0 0 3147000 1276900 0 2513400 4344000 0 5609900 26390000 0 4278100 16386000 49567000 10502 1017 9573 89239;89240;89241;89242;89243;89244;89245;89246;89247;89248;89249 71351;71352;71353;71354;71355;71356;71357 71352 5 EDEVEEWQHRAK Unmodified 1554.7063 0.70628418 1017 P15311 EZR Ezrin yes yes 0 0 1 By MS/MS By matching By MS/MS 2 0 3 1 1 1 38.556 33.548 3 2.6377E-05 42406 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 100.93 91.935 74009000 32597000 15290000 26122000 0 0 0 0 0 0 0 0 0 0 0 0 10503 1017 9574 89250;89251;89252 71358;71359 71359 1 EDEVQAIATLIEK Unmodified 1457.7613 0.76133944 3927 Q96MW1 CCDC43 Coiled-coil domain-containing protein 43 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.73 3.91 5 1 5 1 3 2 1 1 1 1 1 92.501 90.193 2;3 5.9673E-21 112245 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.5 113.13 339660000 23859000 286320000 8094300 0 0 0 0 0 0 3297500 2997200 3653100 0 2002800 9439000 10504 3927 9575 89253;89254;89255;89256;89257;89258;89259;89260;89261;89262;89263 71360;71361;71362;71363;71364;71365;71366;71367 71360 6 EDFATFDYILCMDESNLRDLNRK Unmodified 2864.3109 0.31092875 1176 P24666 ACP1 Low molecular weight phosphotyrosine protein phosphatase yes yes 0 0 2 By MS/MS 2.5 0.5 1 1 2 97.053 91.236 4 4.5439E-81 115554 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 140.97 135.2 68688000 68688000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10505 1176 9576 89264;89265 71368;71369 71369 2 EDFDSLLQSAK Unmodified 1251.5983 0.59829686 860 P08195 SLC3A2 4F2 cell-surface antigen heavy chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 76.749 76.221 2 0.00010237 87176 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 127.4 87.396 1442700000 0 882730000 0 24330000 35231000 33297000 36536000 36026000 35039000 42499000 65992000 68350000 54245000 63533000 64922000 10506 860 9577 89266;89267;89268;89269;89270;89271;89272;89273;89274;89275;89276;89277;89278;89279 71370;71371;71372;71373;71374;71375;71376;71377;71378;71379;71380;71381;71382;71383;71384;71385 71380 16 EDFDVDHFVSDCRK Unmodified 1767.7522 0.75224809 2443 Q14746 COG2 Conserved oligomeric Golgi complex subunit 2 yes yes 0 0 1 By MS/MS 2 0 1 1 70.376 62.091 3 0.0021053 82719 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.614 40.559 6056500 6056500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10507 2443 9578 89280 71386 71386 1 EDFEEARK Unmodified 1022.4669 0.46688876 737 P00966 ASS1 Argininosuccinate synthase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.17 3.85 2 1 3 1 2 1 1 1 13.463 11.845 2 0.0090069 15038 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.62 6.8358 1867100000 339410000 1456000000 0 0 0 0 0 0 0 0 19759000 0 0 19634000 32229000 10508 737 9579 89281;89282;89283;89284;89285;89286 71387;71388;71389;71390;71391 71387 2 EDFEEARKK Unmodified 1150.5619 0.56185177 737 P00966 ASS1 Argininosuccinate synthase yes yes 0 0 2 By MS/MS By MS/MS By MS/MS 2 0 7 3 2 2 10.988 7.7506 2;3 4.3092E-05 11995 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 166.52 131.16 2986500000 796430000 352250000 1837900000 0 0 0 0 0 0 0 0 0 0 0 0 10509 737 9580 89287;89288;89289;89290;89291;89292;89293 71392;71393;71394;71395;71396 71393 1 EDFIELCTPGVIK Unmodified 1519.7592 0.75923095 775 P04150 NR3C1 Glucocorticoid receptor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 84.155 83.842 2 5.828E-08 97242 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 123.79 98.938 311870000 0 71871000 0 5500700 18871000 18567000 14206000 17546000 20677000 23712000 22376000 34086000 16211000 19754000 28495000 10510 775 9581 89294;89295;89296;89297;89298;89299;89300;89301;89302;89303;89304;89305;89306 71397;71398;71399;71400;71401;71402;71403;71404;71405;71406;71407;71408;71409 71407 13 EDFPWSGK Unmodified 964.42905 0.42904669 1496 P46063 RECQL ATP-dependent DNA helicase Q1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61.045 59.932 2 0.012605 68537 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 74.255 57.328 610810000 30233000 456080000 6688400 3119400 4397400 9498800 8286800 6128100 4973300 8947200 13953000 14644000 8055300 11743000 24068000 10511 1496 9582 89307;89308;89309;89310;89311;89312;89313;89314;89315;89316;89317;89318;89319;89320;89321 71410;71411;71412;71413;71414;71415;71416;71417;71418 71411 9 EDFSDMVAEHAAK Unmodified 1448.6242 0.62419403 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.55 3.6 5 2 15 1 4 2 3 2 1 1 1 1 1 1 1 1 1 1 59.154 57.272 2;3 1.6453E-08 66200 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 107.58 84.838 2409500000 57829000 721030000 19900000 87455000 81608000 118900000 94594000 127330000 99913000 131950000 180760000 190920000 127280000 141240000 228830000 10512 2290 9583 89322;89323;89324;89325;89326;89327;89328;89329;89330;89331;89332;89333;89334;89335;89336;89337;89338;89339;89340;89341;89342;89343 71419;71420;71421;71422;71423;71424;71425;71426;71427;71428;71429;71430;71431;71432;71433;71434;71435;71436;71437;71438;71439;71440;71441;71442 71440 24 EDFSDMVAEHAAK Oxidation (M) 1464.6191 0.61910866 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.88 3.47 7 2 24 3 5 1 2 1 2 2 2 2 2 3 3 2 2 1 40.111 38.785 2;3 5.8515E-08 44286 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 117.52 112.04 1831800000 74721000 812270000 15152000 16874000 8450400 58223000 79944000 14263000 72863000 77648000 222820000 172730000 115490000 78718000 11634000 10513 2290 9583 89344;89345;89346;89347;89348;89349;89350;89351;89352;89353;89354;89355;89356;89357;89358;89359;89360;89361;89362;89363;89364;89365;89366;89367;89368;89369;89370;89371;89372;89373;89374;89375;89376 71443;71444;71445;71446;71447;71448;71449;71450;71451;71452;71453;71454;71455;71456;71457;71458;71459;71460;71461;71462;71463;71464;71465;71466;71467;71468 71468 3731 12 EDFSGYDFENR Unmodified 1377.5473 0.54732392 3341 Q8N584 TTC39C Tetratricopeptide repeat protein 39C yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 60.374 60.588 2 0.017282 69117 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.092 46.641 24748000 0 0 0 0 0 3505700 2394000 2389200 0 3137800 3257300 4656700 2350000 3057700 0 10514 3341 9584 89377;89378;89379;89380;89381;89382;89383;89384 71469 71469 1 EDFSSMSAQLLYK Oxidation (M) 1533.7021 0.70211 4825 Q9P2R3 ANKFY1 Rabankyrin-5 yes yes 0 1 0 By MS/MS By MS/MS 5 3.56 1 1 1 2 1 71.32 67.951 2 2.4843E-10 85371 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.4 106.77 104930000 0 101830000 0 0 0 3092000 0 0 0 0 0 0 0 0 0 10515 4825 9585 89385;89386;89387 71470;71471 71471 6200 2 EDFSSMSAQLLYK Unmodified 1517.7072 0.70719538 4825 Q9P2R3 ANKFY1 Rabankyrin-5 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 83.992 80.389 2 0.028604 97715 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 61.161 43.931 234900000 0 232580000 2322000 0 0 0 0 0 0 0 0 0 0 0 0 10516 4825 9585 89388;89389 71472 71472 1 EDFVLSITGK Unmodified 1107.5812 0.58119023 869 P08651 NFIC Nuclear factor 1 C-type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 77.93 78.105 2 0.0017713 89697 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.502 8.0256 34200000 0 0 0 0 0 0 0 0 3756000 6224000 5287100 4066900 0 7062500 7803300 10517 869 9586 89390;89391;89392;89393;89394;89395;89396 71473;71474;71475;71476;71477;71478;71479 71475 7 EDFVLTVTGK Unmodified 1107.5812 0.58119023 2199;174 Q12857;O00712 NFIA;NFIB Nuclear factor 1 A-type;Nuclear factor 1 B-type no no 0 0 0 By MS/MS 10 0 1 1 78.102 78.184 2 0.0063431 90554 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 65.305 0 3270900 0 0 0 0 0 0 0 0 0 0 0 0 3270900 0 0 10518 2199;174 9587 89397 71480 71480 1 EDGAISTIVLR Unmodified 1172.6401 0.6401021 1641 P50990 CCT8 T-complex protein 1 subunit theta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 1 2 2 1 2 2 2 2 1 1 2 70.546 70.669 2 1.197E-27 80913 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 171.56 100.65 2046500000 0 0 0 86270000 81656000 203410000 128430000 104800000 112780000 174750000 213520000 224490000 160900000 158920000 396550000 10519 1641 9588 89398;89399;89400;89401;89402;89403;89404;89405;89406;89407;89408;89409;89410;89411;89412;89413;89414;89415;89416 71481;71482;71483;71484;71485;71486;71487;71488;71489;71490;71491;71492;71493;71494;71495;71496;71497;71498;71499;71500;71501 71482 21 EDGAISTIVLRGSTDNLMDDIERAVDDGVNTFK Oxidation (M) 3581.7155 0.71553482 1641 P50990 CCT8 T-complex protein 1 subunit theta yes yes 0 1 2 By MS/MS By MS/MS 2.43 0.495 4 3 4 3 98.229 93.077 4 1.2812E-79 116513 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 115.77 106.31 1001800000 867950000 133850000 0 0 0 0 0 0 0 0 0 0 0 0 0 10520 1641 9589 89417;89418;89419;89420;89421;89422;89423 71502;71503;71504;71505;71506 71504 2632 5 EDGAISTIVLRGSTDNLMDDIERAVDDGVNTFK Unmodified 3565.7206 0.7206202 1641 P50990 CCT8 T-complex protein 1 subunit theta yes yes 0 0 2 By MS/MS By MS/MS By MS/MS 2.25 0.433 6 2 5 2 1 100.39 94.564 4;5 9.891E-209 117417 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 176.25 161.19 3585400000 3363700000 214930000 6765600 0 0 0 0 0 0 0 0 0 0 0 0 10521 1641 9589 89424;89425;89426;89427;89428;89429;89430;89431 71507;71508;71509;71510;71511;71512;71513;71514 71511 7 EDGATPPDGSVFIK Unmodified 1431.6882 0.6881745 2953 Q6PID6 TTC33 Tetratricopeptide repeat protein 33 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 2 4 1 1 2 1 1 67.022 59.916 2 9.6806E-06 76943 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.27 104.12 214930000 5417000 209510000 0 0 0 0 0 0 0 0 0 0 0 0 0 10522 2953 9590 89432;89433;89434;89435;89436;89437 71515;71516;71517;71518;71519 71517 5 EDGELNLMK Oxidation (M) 1063.4856 0.48557529 5231 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 36.246 30.608 2 0.018482 40207 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.255 26.598 105560000 6437700 99126000 0 0 0 0 0 0 0 0 0 0 0 0 0 10523 5231 9591 89438;89439 71520 71520 6632 1 EDGELNLMK Unmodified 1047.4907 0.49066067 5231 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 54.191 48.844 2 0.0015162 63594 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 135.77 98.121 179540000 0 179540000 0 0 0 0 0 0 0 0 0 0 0 0 0 10524 5231 9591 89440;89441 71521 71521 1 EDGEVVQEEEVCAK Unmodified 1619.6985 0.69848119 4574 Q9NQS1 AVEN Cell death regulator Aven yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.913 38.094 2 8.4932E-12 42227 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 101.93 96.083 55022000 0 0 0 3180600 1817300 9382000 2373900 3294100 6011600 6232100 3614400 5718800 6578800 2578000 4240100 10525 4574 9592 89442;89443;89444;89445;89446;89447;89448;89449;89450;89451;89452;89453 71522;71523;71524;71525;71526;71527;71528;71529;71530 71523 9 EDGEVVQEEEVCAKPSVTEEK Unmodified 2390.0795 0.079515052 4574 Q9NQS1 AVEN Cell death regulator Aven yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 47.353 47.528 3 0.00067064 53935 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 32.305 29.464 35409000 0 0 0 0 4445100 0 3339300 3920700 0 6657600 9774400 7271600 0 0 0 10526 4574 9593 89454;89455;89456;89457;89458;89459 71531;71532;71533 71533 3 EDGFFLLDEISLADDSVLERLNSVLEVEK Unmodified 3293.6555 0.65548397 4641 Q9NU22 MDN1 Midasin yes yes 0 0 1 By MS/MS 2 0 1 1 105.5 97.373 3 6.1775E-30 125103 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.727 84.24 21333000 21333000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10527 4641 9594 89460 71534 71534 1 EDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIK Unmodified 4049.8333 0.83328347 3608 Q92499 DDX1 ATP-dependent RNA helicase DDX1 yes yes 0 0 0 By MS/MS 2 0 1 1 104.38 96.248 3 8.5661E-34 123635 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.741 83.186 8330200 8330200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10528 3608 9595 89461 71535 71535 1 EDGGGCYDIPNWSALK Unmodified 1780.7726 0.77264919 1355 P35573 AGL Glycogen debranching enzyme;4-alpha-glucanotransferase;Amylo-alpha-1,6-glucosidase yes yes 0 0 0 By MS/MS 2 0 1 1 84.784 80.04 2 1.8022E-07 99494 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.65 91.391 47358000 0 47358000 0 0 0 0 0 0 0 0 0 0 0 0 0 10529 1355 9596 89462 71536 71536 1 EDGHRTSTSAVPNLFVPLNTNPK Unmodified 2493.2612 0.26120008 1361 P35611 ADD1 Alpha-adducin yes yes 0 0 1 By MS/MS 2 0 1 1 85.4 77.269 4 0.0035234 100897 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 37.373 35.606 12880000 12880000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10530 1361 9597 89463 71537;71538 71538 2 EDGIVPLR Unmodified 897.49198 0.4919813 324 O43396 TXNL1 Thioredoxin-like protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 49.607 50.318 2 0.018686 55921 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.236 50.565 19506000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19506000 10531 324 9598 89464 71539 71539 1 EDGLAQQQTQLNLR Unmodified 1612.8169 0.81689726 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 1 3 1 1 2 3 1 2 2 3 3 55.045 55.246 2;3 0 62346 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 282.95 256.28 1713200000 0 0 0 75704000 0 239520000 96270000 65495000 12528000 183330000 200540000 248480000 109460000 161590000 320320000 10532 1565 9599 89465;89466;89467;89468;89469;89470;89471;89472;89473;89474;89475;89476;89477;89478;89479;89480;89481;89482;89483;89484;89485;89486;89487;89488 71540;71541;71542;71543;71544;71545;71546;71547;71548;71549;71550;71551;71552;71553;71554;71555;71556;71557;71558;71559 71547 20 EDGNEEDKENQGDETQGQQPPQR Unmodified 2627.0968 0.096773109 1955 P67809 YBX1 Nuclease-sensitive element-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 14.552 14.659 3 0.00046849 14094 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 36.246 33.323 33340000 0 0 0 3661600 5438600 0 2627600 4052500 0 8721500 5115900 0 0 3722400 0 10533 1955 9600 89489;89490;89491;89492;89493;89494;89495 71560;71561;71562;71563;71564 71562 5 EDGNEEDKENQGDETQGQQPPQRR Unmodified 2783.1979 0.19788414 1955 P67809 YBX1 Nuclease-sensitive element-binding protein 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 2 1 1 1 2 1 1 1 2 1 1 1 11.782 11.922 3;4 9.086E-126 10605 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 183.26 180.1 249620000 0 0 0 27886000 32612000 3627000 17958000 23062000 3736600 20210000 19853000 43836000 21964000 15106000 19775000 10534 1955 9601 89496;89497;89498;89499;89500;89501;89502;89503;89504;89505;89506;89507;89508;89509;89510 71565;71566;71567;71568;71569;71570;71571;71572;71573;71574;71575;71576;71577;71578;71579;71580 71576 16 EDGQEYAQVIK Unmodified 1278.6092 0.6091959 1526 P47813;O14602 EIF1AX;EIF1AY Eukaryotic translation initiation factor 1A, X-chromosomal;Eukaryotic translation initiation factor 1A, Y-chromosomal yes no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.38 1 1 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 49.844 49.303 2 8.5714E-11 50944 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 152.11 109.03 728510000 36277000 300150000 0 5668700 6551800 8335800 11243000 10053000 7333300 15973000 79247000 56028000 10707000 42618000 138330000 10535 1526 9602 89511;89512;89513;89514;89515;89516;89517;89518;89519;89520;89521;89522;89523;89524;89525;89526 71581;71582;71583;71584;71585;71586;71587;71588;71589;71590;71591;71592;71593;71594 71589 13 EDGRSSSGPPHETAAPK Unmodified 1721.7969 0.7968901 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.68 1.46 1 21 1 2 2 1 2 2 2 2 1 2 2 1 2 10.002 9.964 3;4 0.00029549 6168 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 55.33 43.185 95806000 0 1751600 0 7021500 6237500 2261800 10651000 8197200 6869600 7693100 7047200 15324000 7685100 4710400 10355000 10536 5262 9603 89527;89528;89529;89530;89531;89532;89533;89534;89535;89536;89537;89538;89539;89540;89541;89542;89543;89544;89545;89546;89547;89548 71595;71596;71597;71598;71599;71600;71601;71602;71603 71601 8 EDGRVQAFGWSLPQK Unmodified 1716.8584 0.85836815 391 O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes yes 0 0 1 By MS/MS 10 0 1 1 75.69 76.001 3 0.0013388 87320 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.325 31.186 24940000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24940000 10537 391 9604 89549 71604 71604 1 EDGSEVGVGGAQVTGSNTRK Unmodified 1946.9294 0.92936084 2330 Q13618 CUL3 Cullin-3 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 32.247 27.759 3 0.00022107 36505 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 50.397 43.827 12866000 0 12866000 0 0 0 0 0 0 0 0 0 0 0 0 0 10538 2330 9605 89550;89551 71605;71606 71606 2 EDGSGDRGDGPFR Unmodified 1363.5753 0.57527001 974 P13010 XRCC5 X-ray repair cross-complementing protein 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 18.908 19.103 2;3 1.2022E-06 18336 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 103.87 54.337 467970000 0 0 0 23412000 18201000 36371000 20384000 21931000 18368000 48376000 40799000 44628000 41237000 42181000 112080000 10539 974 9606 89552;89553;89554;89555;89556;89557;89558;89559;89560;89561;89562;89563;89564;89565;89566;89567;89568;89569;89570;89571;89572;89573;89574;89575 71607;71608;71609;71610;71611;71612;71613;71614;71615;71616;71617;71618 71611 7 EDGTFYEFGEDIPEAPER Unmodified 2099.896 0.89599502 366 O43776 NARS Asparagine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS 10 0 1 1 82.453 82.655 2 1.724E-19 95333 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.531 84.273 10262000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10262000 10540 366 9607 89576 71619 71619 1 EDGTFYEFGEDIPEAPERLMTDTINEPILLCRFPVEIK Unmodified 4483.1604 0.16035492 366 O43776 NARS Asparagine--tRNA ligase, cytoplasmic yes yes 0 0 2 By MS/MS 2 0 1 1 99.888 91.758 4 2.9874E-30 118279 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.616 66.413 19932000 19932000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10541 366 9608 89577 71620 71620 1 EDGTLPTNNRK Unmodified 1243.6157 0.61567826 4724 Q9NXF1 TEX10 Testis-expressed sequence 10 protein yes yes 0 0 1 By MS/MS 10 0 1 1 10.147 10.593 3 0.048714 8889 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 40.727 25.098 2265200 0 0 0 0 0 0 0 0 0 0 2265200 0 0 0 0 10542 4724 9609 89578 71621 71621 0 EDGVTPYMIFFK Unmodified 1445.6901 0.69008876 984 P13693 TPT1 Translationally-controlled tumor protein yes yes 0 0 0 By MS/MS 10 0 1 1 93.035 93.172 2 0.0056825 108001 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.493 42.97 2491700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2491700 10543 984 9610 89579 71622 71622 1 EDHEGLGISITGGK Unmodified 1411.6943 0.69432251 4525 Q9HD26 GOPC Golgi-associated PDZ and coiled-coil motif-containing protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 7 3.8 4 1 8 1 3 1 1 1 1 1 1 1 1 1 54.942 52.944 2;3 8.003E-30 68622 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 144.7 123.01 188930000 8388100 130780000 2488200 0 0 5377300 0 0 2146200 5401100 5868000 8284400 3828400 3997200 12371000 10544 4525 9611 89580;89581;89582;89583;89584;89585;89586;89587;89588;89589;89590;89591;89592 71623;71624;71625;71626;71627 71624 4 EDHLMSAMNIK Unmodified 1287.5951 0.59514251 3419;3261 Q8NDX5;Q8IXK0 PHC3;PHC2 Polyhomeotic-like protein 3;Polyhomeotic-like protein 2 no no 0 0 0 By MS/MS 2 0 1 1 62.151 56.258 3 0.047304 72386 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 33.87 26.742 11003000 0 11003000 0 0 0 0 0 0 0 0 0 0 0 0 0 10545 3419;3261 9612 89593 71628 71628 1 EDHLVYADEESSNITDGR Unmodified 2048.8923 0.89230663 1600 P49790 NUP153 Nuclear pore complex protein Nup153 yes yes 0 0 0 By MS/MS 10 0 1 1 51.669 51.139 3 6.7054E-11 58275 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 91.518 87.321 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10546 1600 9613 89594 71629 71629 1 EDHQLEPIYR Unmodified 1298.6255 0.62551466 3283 Q8IYH5 ZZZ3 ZZ-type zinc finger-containing protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 40.443 40.682 3 0.0020859 45435 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 59.645 53.204 100070000 0 0 0 7027800 0 11355000 3715500 5320600 5617000 10084000 13562000 21871000 7264100 5572200 8681500 10547 3283 9614 89595;89596;89597;89598;89599;89600;89601;89602;89603;89604;89605 71630;71631;71632;71633;71634 71630 5 EDHSLEHRCVESAK Unmodified 1695.7635 0.76348148 1812 P60520 GABARAPL2 Gamma-aminobutyric acid receptor-associated protein-like 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 14.722 11.513 3 0.0022773 14846 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 61.03 39.729 11609000 5617800 0 5990800 0 0 0 0 0 0 0 0 0 0 0 0 10548 1812 9615 89606;89607 71635 71635 1 EDHTLGNIIK Unmodified 1138.5982 0.59823728 1687 P52435;Q9H1A7;Q9GZM3 POLR2J;POLR2J3;POLR2J2 DNA-directed RNA polymerase II subunit RPB11-a;DNA-directed RNA polymerase II subunit RPB11-b2;DNA-directed RNA polymerase II subunit RPB11-b1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47.528 46.474 3 1.9539E-06 62018 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.18 81.956 200660000 7483200 75086000 9075700 6809100 4605400 10867000 6616400 14069000 4960300 7742800 11517000 8122800 9728200 9077500 14898000 10549 1687 9616 89608;89609;89610;89611;89612;89613;89614;89615;89616;89617;89618;89619;89620;89621;89622 71636;71637;71638 71636 3 EDIASLTR Unmodified 903.46616 0.46616048 5257 Q9Y605 MRFAP1 MORF4 family-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 40.422 40.607 2 0.0067642 43989 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.009 19.685 50497000 0 0 0 0 3434300 0 7208400 4516600 0 0 0 0 6576500 7606400 21155000 10550 5257 9617 89623;89624;89625;89626;89627;89628 71639;71640 71639 2 EDIDAAIETYNLLSER Unmodified 1850.8898 0.88978743 1171 P23921 RRM1 Ribonucleoside-diphosphate reductase large subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 90.059 90.186 2 3.062E-10 104463 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.011 69.635 5662000 0 0 0 0 0 0 0 0 0 2006100 0 0 0 0 3655900 10551 1171 9618 89629;89630;89631 71641;71642;71643;71644 71642 4 EDIDTALLK Unmodified 1016.539 0.53899107 3545 Q8WUH2 TGFBRAP1 Transforming growth factor-beta receptor-associated protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 66.95 61.034 2 0.01494 77959 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.548 20.576 36173000 0 36173000 0 0 0 0 0 0 0 0 0 0 0 0 0 10552 3545 9619 89632 71645 71645 1 EDIEFICK Unmodified 1052.4848 0.48484701 1642 P50991 CCT4 T-complex protein 1 subunit delta yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 57.735 58.129 2 0.022922 65282 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 60.76 43.202 24343000 0 0 0 0 0 0 0 0 0 0 13084000 0 0 6954900 4304200 10553 1642 9620 89633;89634;89635 71646 71646 1 EDIERMVQEAEK Oxidation (M) 1491.6875 0.68752257 934 P11142 HSPA8 Heat shock cognate 71 kDa protein yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 4.3 3.4 14 6 7 8 8 4 1 1 1 1 1 1 1 44.279 40.327 2;3 4.687E-16 49134 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 155.33 118.91 6386200000 1186800000 4721400000 411720000 6647000 3085700 0 0 6312600 0 0 13142000 17437000 9363700 10261000 0 10554 934 9621 89636;89637;89638;89639;89640;89641;89642;89643;89644;89645;89646;89647;89648;89649;89650;89651;89652;89653;89654;89655;89656;89657;89658;89659;89660;89661;89662 71647;71648;71649;71650;71651;71652;71653;71654;71655;71656;71657;71658;71659;71660;71661;71662;71663;71664;71665;71666;71667;71668;71669 71647 1210 19 EDIERMVQEAEK Unmodified 1475.6926 0.69260795 934 P11142 HSPA8 Heat shock cognate 71 kDa protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.09 0.514 1 8 2 5 4 2 72.179 67.228 2;3 4.73E-147 77230 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 274.43 227.24 6963500000 2224000000 4441000000 298490000 0 0 0 0 0 0 0 0 0 0 0 0 10555 934 9621 89663;89664;89665;89666;89667;89668;89669;89670;89671;89672;89673 71670;71671;71672;71673;71674;71675;71676;71677;71678;71679;71680;71681;71682;71683;71684;71685 71682 15 EDIGVGSYSVCK Unmodified 1312.5969 0.59691665 1672 P51812;Q15349;Q9UK32 RPS6KA3;RPS6KA2;RPS6KA6 Ribosomal protein S6 kinase alpha-3;Ribosomal protein S6 kinase alpha-2;Ribosomal protein S6 kinase alpha-6 yes no 0 0 0 By MS/MS 3 0 1 1 55.095 50.216 2 0.0090182 62034 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 77.677 68.09 1918600 0 1918600 0 0 0 0 0 0 0 0 0 0 0 0 0 10556 1672 9622 89674 71686 71686 1 EDIIQGFR Unmodified 976.49779 0.49779495 974 P13010 XRCC5 X-ray repair cross-complementing protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 60.219 60.521 2 0.0050161 68993 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 128.48 51.638 708130000 0 0 0 0 0 0 54577000 47418000 57194000 0 158750000 99617000 0 108950000 181610000 10557 974 9623 89675;89676;89677;89678;89679;89680;89681;89682 71687;71688;71689;71690;71691;71692;71693;71694 71691 4 EDIIQGFRYGSDIVPFSK Unmodified 2070.0422 0.042205751 974 P13010 XRCC5 X-ray repair cross-complementing protein 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 91.048 86.37 3 0.0002092 108707 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.164 53.059 111090000 59053000 50391000 1648800 0 0 0 0 0 0 0 0 0 0 0 0 10558 974 9624 89683;89684;89685;89686 71695;71696;71697;71698 71695 4 EDILEFIK Unmodified 1005.5383 0.53826279 3704 Q93034 CUL5 Cullin-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 90.077 84.92 2 0.010984 107858 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.81 63.741 63899000 17192000 43992000 2715000 0 0 0 0 0 0 0 0 0 0 0 0 10559 3704 9625 89687;89688;89689 71699;71700;71701 71701 3 EDILNYLEK Unmodified 1135.5761 0.57610486 938 P11182 DBT Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 84.404 80.786 2 0.0053946 100275 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.71 54.038 45629000 0 42702000 2926700 0 0 0 0 0 0 0 0 0 0 0 0 10560 938 9626 89690;89691 71702;71703 71702 2 EDINAIEMEEDK Unmodified 1434.6184 0.61843995 1596 P49756 RBM25 RNA-binding protein 25 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 54.325 52.98 2 8.3851E-20 59214 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 159.83 147.25 70706000 0 15289000 0 9770000 6645200 0 10489000 0 0 0 0 0 0 28512000 0 10561 1596 9627 89692;89693;89694;89695;89696;89697;89698;89699 71704;71705;71706;71707;71708;71709;71710;71711;71712 71710 9 EDINAIEMEEDK Oxidation (M) 1450.6134 0.61335458 1596 P49756 RBM25 RNA-binding protein 25 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 2 1 2 1 1 1 1 1 1 1 43.548 43.608 2 1.5571E-05 48580 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 102.06 77.907 75701000 0 0 0 4633800 3059700 19193000 4377000 5420200 13593000 9135600 0 7748700 0 8540300 0 10562 1596 9627 89700;89701;89702;89703;89704;89705;89706;89707;89708;89709;89710;89711 71713;71714;71715;71716;71717;71718;71719;71720 71714 2565 7 EDINAIEMEEDKR Unmodified 1590.7196 0.71955098 1596 P49756 RBM25 RNA-binding protein 25 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.227 47.392 3 0.00034332 53148 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 71.548 64.509 125310000 0 0 0 6072700 6946900 8318400 10161000 10081000 8679600 15960000 12029000 13879000 5876100 10331000 16976000 10563 1596 9628 89712;89713;89714;89715;89716;89717;89718;89719;89720;89721;89722;89723 71721;71722;71723;71724;71725;71726;71727;71728;71729;71730 71726 9 EDINAIEMEEDKRDLISR Oxidation (M) 2191.0427 0.042676036 1596 P49756 RBM25 RNA-binding protein 25 yes yes 0 1 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 2 2 1 1 2 1 2 1 2 59.42 59.538 3;4 8.9196E-11 67673 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 88.637 82.363 365590000 0 0 0 9613200 23104000 34925000 0 24159000 22531000 49281000 24163000 75571000 0 16919000 85328000 10564 1596 9629 89724;89725;89726;89727;89728;89729;89730;89731;89732;89733;89734;89735;89736;89737;89738 71731;71732;71733;71734;71735;71736;71737;71738;71739;71740;71741;71742;71743;71744;71745 71742 2565 10 EDINAIEMEEDKRDLISR Unmodified 2175.0478 0.047761414 1596 P49756 RBM25 RNA-binding protein 25 yes yes 0 0 2 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 2 1 2 2 2 2 2 2 2 2 65.776 65.955 3;4 1.3256E-08 74873 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.367 69.879 158270000 0 0 0 2306100 0 8596600 1843600 12154000 9233700 10799000 12638000 22030000 9399600 12959000 56313000 10565 1596 9629 89739;89740;89741;89742;89743;89744;89745;89746;89747;89748;89749;89750;89751;89752;89753;89754;89755;89756;89757;89758 71746;71747;71748;71749;71750;71751;71752;71753;71754;71755;71756;71757;71758 71750 10 EDINLSVR Unmodified 944.49271 0.49270958 2557 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 46.787 46.953 2 0.018652 51754 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 64.265 28.384 76327000 0 0 0 3083000 3192900 10258000 5243400 0 4526400 10710000 8236200 8872200 5301900 7447900 9454700 10566 2557 9630 89759;89760;89761;89762;89763;89764;89765;89766;89767;89768;89769 71759 71759 1 EDINLSVRK Unmodified 1072.5877 0.58767259 2557 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog yes yes 0 0 1 By MS/MS 10 0 1 1 33.287 34.009 2 0.041671 36299 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.75 15.257 12848000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12848000 10567 2557 9631 89770 71760 71760 0 EDIQIQFLPDHINIVLK Unmodified 2034.115 0.11497676 3975 Q96RS6 NUDCD1 NudC domain-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 97.734 89.604 3 0.00092528 115652 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 33.63 24.367 20219000 20219000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10568 3975 9632 89771 71761 71761 1 EDIQSVMTEIR Unmodified 1319.6391 0.63911582 1720 P53618 COPB1 Coatomer subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.415 76.47 2 0.00026521 88285 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 107.79 82.229 103350000 0 0 0 4102000 5430300 9659700 6543600 9581500 4258100 11261000 12288000 12643000 0 9055400 18527000 10569 1720 9633 89772;89773;89774;89775;89776;89777;89778;89779;89780;89781;89782 71762;71763;71764;71765;71766;71767;71768;71769;71770;71771;71772 71770 10 EDIQSVMTEIRR Unmodified 1475.7402 0.74022685 1720 P53618 COPB1 Coatomer subunit beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 71.627 71.433 3 9.3762E-06 81397 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.937 68.561 103250000 0 0 6977200 1702900 2034500 11212000 2856000 7461900 4763400 10550000 6508400 0 7093700 9433600 32657000 10570 1720 9634 89783;89784;89785;89786;89787;89788;89789;89790;89791;89792;89793;89794 71773;71774;71775;71776;71777;71778;71779;71780;71781 71775 8 EDISQGVHISVYR Unmodified 1501.7525 0.75250609 323 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 60.384 60.567 3 0.0048493 68675 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 49.627 38.702 53860000 0 0 0 0 2193900 5047100 0 4275900 5069900 6712800 4318800 8250600 4260700 4304800 9425800 10571 323 9635 89795;89796;89797;89798;89799;89800;89801;89802;89803;89804 71782;71783;71784;71785;71786;71787;71788 71785 5 EDITQEFPGK Unmodified 1162.5506 0.55061839 1974 P78344 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 51.404 50.916 2 1.0086E-09 58649 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 149.65 104.57 2222300000 6974600 0 0 88520000 114390000 156880000 129430000 159230000 165280000 180580000 203850000 226000000 201710000 204760000 384680000 10572 1974 9636 89805;89806;89807;89808;89809;89810;89811;89812;89813;89814;89815;89816;89817 71789;71790;71791;71792;71793;71794;71795;71796;71797;71798;71799;71800;71801;71802;71803;71804;71805;71806;71807;71808;71809;71810;71811;71812;71813 71812 24 EDITQSAQHALR Unmodified 1367.6793 0.67934115 2207 Q12906 ILF3 Interleukin enhancer-binding factor 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 40.54 40.669 3 0.0035033 45512 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 41.401 33.49 176540000 0 0 0 17969000 9520700 17888000 13144000 15063000 15580000 17696000 13413000 19507000 19735000 17025000 0 10573 2207 9637 89818;89819;89820;89821;89822;89823;89824;89825;89826;89827;89828 71814;71815;71816;71817;71818;71819;71820;71821 71814 4 EDIYAVEIVGGATR Unmodified 1491.7569 0.75692277 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 77.855 78.048 2 0.003042 90274 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 66.56 49.092 37343000 0 0 0 0 0 0 0 0 0 0 5508700 6166600 0 5967800 19700000 10574 1337 9638 89829;89830;89831;89832 71822;71823;71824;71825 71823 2 EDIYAVEIVGGATRIPAVK Unmodified 2000.0942 0.094241321 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 2.78 2.62 2 5 1 1 5 2 1 1 92.583 89.893 2;3;4 2.2759E-89 106146 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 180.78 160.35 526800000 464930000 35706000 20811000 0 0 0 0 0 0 0 0 0 0 0 5356700 10575 1337 9639 89833;89834;89835;89836;89837;89838;89839;89840;89841 71826;71827;71828;71829;71830;71831;71832;71833;71834 71833 8 EDIYSGGGGGGSR Unmodified 1210.5214 0.52144352 2243 Q13151 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 17.764 18.176 2 0.025639 17235 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.056 57.193 57733000 0 0 0 0 0 0 0 0 0 14968000 14912000 0 0 0 27853000 10576 2243 9640 89842;89843;89844;89845 71835;71836 71836 1 EDKGEDSEPVTSK Unmodified 1419.6365 0.63653286 3371 Q8N8S7 ENAH Protein enabled homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.46 3.15 5 21 2 3 2 2 1 2 2 1 2 2 2 2 1 2 7.7982 7.235 2;3 8.6374E-36 8282 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 202.27 174.97 311150000 19833000 117450000 0 10764000 9907700 1330300 11964000 3779600 1745700 16262000 51767000 24858000 16042000 4343700 21104000 10577 3371 9641 89846;89847;89848;89849;89850;89851;89852;89853;89854;89855;89856;89857;89858;89859;89860;89861;89862;89863;89864;89865;89866;89867;89868;89869;89870;89871 71837;71838;71839;71840;71841;71842;71843;71844;71845;71846;71847 71840 10 EDKLECSEELGDLVK Unmodified 1762.8295 0.82949536 2040;1723 P53675;Q00610 CLTCL1;CLTC Clathrin heavy chain 2;Clathrin heavy chain 1 no no 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.47 3.59 3 2 10 2 2 1 1 1 1 1 1 1 1 1 1 1 69.75 68.109 2;3 1.0228E-38 84062 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 109.07 89.495 405460000 105930000 179340000 11419000 5693700 7156700 0 6837900 8415700 0 11786000 11030000 15769000 7018400 11303000 23760000 10578 1723;2040 9642 89872;89873;89874;89875;89876;89877;89878;89879;89880;89881;89882;89883;89884;89885;89886 71848;71849;71850;71851;71852 71851 4 EDKPPLAPSGGTEGPEQPPPPCPSQTGSPPVGLIK Unmodified 3517.7399 0.73989908 3576 Q8WWM7 ATXN2L Ataxin-2-like protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.57 76.679 3 2.5401E-26 88195 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.484 50.627 86832000 0 0 0 0 3545700 7225000 5587900 6335800 6130600 8532200 7243100 9359300 7108600 9536800 16227000 10579 3576 9643 89887;89888;89889;89890;89891;89892;89893;89894;89895;89896;89897 71853;71854;71855;71856;71857;71858;71859;71860;71861;71862;71863 71856 11 EDKYEEEIK Unmodified 1181.5452 0.54519866 1957;90;853;831 CON__Q3SX28;P06753;P07951;P67936 TPM3;TPM2;TPM4 Tropomyosin alpha-3 chain;Tropomyosin beta chain;Tropomyosin alpha-4 chain no no 0 0 1 By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 23.279 22.386 2 2.3706E-05 22918 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 159.79 114.07 + 2904200000 297430000 1656900000 34797000 29235000 22285000 16368000 26210000 26902000 13767000 40580000 148010000 183890000 79813000 105520000 222460000 10580 90;831;853;1957 9644 89898;89899;89900;89901;89902;89903;89904;89905;89906;89907;89908;89909;89910;89911;89912;89913 71864;71865;71866;71867 71865 1 EDLATFIEELEAVEAK Unmodified 1805.8935 0.89347583 946 P11388 TOP2A DNA topoisomerase 2-alpha yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 101.93 93.795 2;3 3.2896E-28 120403 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 151.55 127.46 4247500 4247500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10581 946 9645 89914;89915 71868;71869 71868 2 EDLDIVCER Unmodified 1147.5179 0.51793805 1418 P40692 MLH1 DNA mismatch repair protein Mlh1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.51 51.737 2 0.0036211 58496 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 95.358 79.696 165980000 0 0 0 0 6616200 17384000 10234000 0 11192000 14594000 20927000 20970000 22701000 14987000 26375000 10582 1418 9646 89916;89917;89918;89919;89920;89921;89922;89923;89924;89925;89926;89927 71870;71871;71872;71873;71874;71875;71876;71877;71878;71879;71880;71881 71871 12 EDLDKVEPAVIEAQNAVK Unmodified 1967.0211 0.021135958 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 1 By MS/MS By MS/MS By matching 6.25 3.77 1 1 2 2 1 1 75.517 73.601 3 4.1786E-14 87901 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 81.656 66.734 106230000 0 78954000 0 0 0 0 0 0 0 0 0 16423000 0 0 10849000 10583 2392 9647 89928;89929;89930;89931 71882;71883 71882 2 EDLDLPNHLVGLK Unmodified 1461.7827 0.78274359 2142 Q07864 POLE DNA polymerase epsilon catalytic subunit A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 81.753 77.088 3 0.001269 96850 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.864 38.991 96920000 12901000 77314000 6705200 0 0 0 0 0 0 0 0 0 0 0 0 10584 2142 9648 89932;89933;89934;89935 71884;71885;71886;71887;71888 71884 5 EDLELIMTEMEISR 2 Oxidation (M) 1739.7958 0.79575239 4716 Q9NX55 HYPK Huntingtin-interacting protein K yes yes 0 2 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 2 2 1 2 2 1 76.537 76.659 2;3 1.3199E-99 88582 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 217.14 196.36 281620000 0 0 0 0 1955600 0 16237000 18423000 14714000 58792000 81179000 90319000 0 0 0 10585 4716 9649 89936;89937;89938;89939;89940;89941;89942;89943;89944;89945;89946 71889;71890;71891;71892;71893;71894;71895;71896 71893 6105;6106 7 EDLELIMTEMEISR Oxidation (M) 1723.8008 0.80083777 4716 Q9NX55 HYPK Huntingtin-interacting protein K yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 83.214 83.384 2 6.4336E-12 96553 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 101.39 94.952 14664000 0 0 0 0 0 0 0 0 0 0 7418400 7246000 0 0 0 10586 4716 9649 89947;89948;89949 71897;71898;71899 71898 6105;6106 3 EDLEPEIR Unmodified 999.48729 0.48728985 2139 Q07687 DLX2 Homeobox protein DLX-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 42.986 43.079 2 0.013643 47035 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.877 24.434 71810000 0 0 0 5736500 4578300 0 6838900 5652700 8866300 9253000 0 0 9099300 8450600 13335000 10587 2139 9650 89950;89951;89952;89953;89954;89955;89956;89957;89958 71900;71901;71902;71903;71904 71901 5 EDLETGVHLDPAVK Unmodified 1521.7675 0.76748745 408 O60508 CDC40 Pre-mRNA-processing factor 17 yes yes 0 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 1 3 66.269 59.956 2;3 4.9694E-16 77167 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.83 86.791 48194000 4374800 43819000 0 0 0 0 0 0 0 0 0 0 0 0 0 10588 408 9651 89959;89960;89961;89962 71905;71906;71907 71906 3 EDLFGRPSQGLYSSSASSGK Unmodified 2071.9811 0.98106206 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61.316 60.544 3 3.5338E-37 69124 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 108.14 103.34 222670000 4523700 0 9959600 9969400 8456800 13983000 11855000 14370000 13419000 17804000 21961000 26654000 16413000 21596000 31708000 10589 619 9652 89963;89964;89965;89966;89967;89968;89969;89970;89971;89972;89973;89974;89975;89976 71908;71909;71910;71911;71912;71913;71914;71915;71916;71917;71918;71919;71920;71921;71922 71909 15 EDLHDMLASLGK Oxidation (M) 1343.6391 0.63911582 229 P19105;O14950;P24844 MYL12A;MYL12B;MYL9 Myosin regulatory light chain 12A;Myosin regulatory light chain 12B;Myosin regulatory light polypeptide 9 yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.07 2.56 5 38 1 2 2 4 4 4 4 3 3 4 2 3 3 2 2 60.28 59.999 2;3 1.2687E-17 68760 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 146.11 114.1 1497900000 162540 126540000 42990000 105080000 121580000 150870000 142120000 41048000 115240000 171370000 132930000 92123000 99768000 47731000 108340000 10590 229 9653 89977;89978;89979;89980;89981;89982;89983;89984;89985;89986;89987;89988;89989;89990;89991;89992;89993;89994;89995;89996;89997;89998;89999;90000;90001;90002;90003;90004;90005;90006;90007;90008;90009;90010;90011;90012;90013;90014;90015;90016;90017;90018;90019 71923;71924;71925;71926;71927;71928;71929;71930;71931;71932;71933;71934;71935;71936;71937;71938;71939;71940;71941;71942;71943;71944;71945;71946;71947;71948;71949;71950 71927 303 14 EDLHDMLASLGK Unmodified 1327.6442 0.6442012 229 P19105;O14950;P24844 MYL12A;MYL12B;MYL9 Myosin regulatory light chain 12A;Myosin regulatory light chain 12B;Myosin regulatory light polypeptide 9 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 4 14 2 1 1 1 2 2 1 2 2 1 1 2 83.809 82.62 2;3 6.2584E-27 104620 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 195.27 166.57 492340000 50279000 209110000 5030100 0 0 3588100 0 14092000 12867000 3802100 11368000 15455000 10578000 19519000 136650000 10591 229 9653 90020;90021;90022;90023;90024;90025;90026;90027;90028;90029;90030;90031;90032;90033;90034;90035;90036;90037 71951;71952;71953;71954;71955;71956;71957;71958;71959;71960 71957 9 EDLILSLR Unmodified 957.5495 0.54949617 4001 Q96T76 MMS19 MMS19 nucleotide excision repair protein homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 77.433 77.466 2 0.0067966 88842 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.492 7.3494 43598000 0 0 0 2275400 2891900 5589900 2450500 3117700 0 5193100 4389200 0 5472600 4666200 7551100 10592 4001 9654 90038;90039;90040;90041;90042;90043;90044;90045;90046;90047 71961;71962;71963;71964;71965;71966;71967 71963 7 EDLIREER Unmodified 1058.5356 0.53563702 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.355 23.559 2 0.015275 24686 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 133.58 71.62 297540000 0 0 0 14251000 11473000 15251000 15146000 16262000 12395000 26883000 25446000 42848000 37663000 31774000 48152000 10593 528 9655 90048;90049;90050;90051;90052;90053;90054;90055;90056;90057;90058;90059 71968;71969;71970 71968 0 EDLISAFGTDDQTEICK Unmodified 1940.8673 0.86733743 5146 Q9Y3A5 SBDS Ribosome maturation protein SBDS yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 80.561 79.533 2 5.9793E-118 97499 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 219.43 212.46 475330000 18997000 394880000 0 1970800 2848200 7260500 3423700 2044100 3774200 6356600 5374800 7535900 3601900 4571400 12685000 10594 5146 9656 90060;90061;90062;90063;90064;90065;90066;90067;90068;90069;90070;90071;90072;90073;90074 71971;71972;71973;71974;71975;71976;71977;71978;71979;71980;71981;71982;71983;71984;71985 71974 15 EDLKEEEEGKEEDEIK Unmodified 1947.8797 0.87967626 2003 P82970 HMGN5 High mobility group nucleosome-binding domain-containing protein 5 yes yes 0 0 2 By MS/MS 2 0 1 1 35.513 29.165 3 0.0002401 40807 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.882 74.145 38826000 38826000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10595 2003 9657 90075 71986 71986 1 EDLLDQLK Unmodified 972.51278 0.51277632 265 O15226 NKRF NF-kappa-B-repressing factor yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 75.898 70.957 2 0.014369 88756 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.909 28.74 33930000 0 33930000 0 0 0 0 0 0 0 0 0 0 0 0 0 10596 265 9658 90076;90077 71987;71988 71987 2 EDLLNNGQPR Unmodified 1154.568 0.56799978 3581 Q8WX93 PALLD Palladin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.29 33.475 2 0.00050469 36234 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 125.25 86.461 189850000 0 0 0 9123700 9996200 12674000 12843000 8957200 13286000 13215000 19271000 19612000 12102000 18591000 40181000 10597 3581 9659 90078;90079;90080;90081;90082;90083;90084;90085;90086;90087;90088;90089 71989;71990;71991;71992;71993;71994;71995;71996;71997;71998;71999;72000;72001;72002 71994 14 EDLLQADFEGALK Unmodified 1447.7195 0.71947463 2752 Q5R372 RABGAP1L Rab GTPase-activating protein 1-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 88.146 83.483 2 0.00034803 104587 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.18 89.237 38957000 3015800 34327000 1613800 0 0 0 0 0 0 0 0 0 0 0 0 10598 2752 9660 90090;90091;90092;90093 72003;72004;72005;72006 72003 4 EDLLQHFSTANQGPK Unmodified 1683.8216 0.82164829 4822 Q9P2N5 RBM27 RNA-binding protein 27 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 65.947 64.753 3 0.0021021 84973 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 56.527 45.088 81131000 0 19765000 0 9759300 0 23003000 15483000 0 13120000 0 0 0 0 0 0 10599 4822 9661 90094;90095;90096;90097;90098 72007;72008;72009 72008 3 EDLLQNPYFSK Unmodified 1352.6612 0.66123147 4413 Q9H6D7 HAUS4 HAUS augmin-like complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.543 76.601 2 0.00029633 87972 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.15 76.348 63241000 0 0 0 2361600 3511900 4630800 4777200 4898400 4486900 6270700 5657400 6585600 5420500 4466400 10174000 10600 4413 9662 90099;90100;90101;90102;90103;90104;90105;90106;90107;90108;90109;90110 72010;72011;72012;72013;72014;72015;72016;72017;72018;72019;72020;72021 72013 12 EDLLSPINQNTLQR Unmodified 1639.8529 0.85294842 2966 Q6R327 RICTOR Rapamycin-insensitive companion of mTOR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 74.72 74.871 2 0.0044327 85899 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 45.653 35.998 34255000 0 0 0 0 0 0 7065800 9316500 8791400 0 0 0 9081400 0 0 10601 2966 9663 90111;90112;90113;90114 72022;72023;72024 72023 2 EDLNCQEEEDPMNK Oxidation (M) 1765.6771 0.67709382 546 O75821 EIF3G Eukaryotic translation initiation factor 3 subunit G yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 4 20 2 2 1 2 2 2 1 1 2 2 2 1 2 2 23.459 23.474 2 1.6698E-35 24482 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 147.62 132.36 103430000 0 7196600 0 2397900 6575200 6081100 5684400 2172300 1667400 8594500 10141000 14603000 6016600 10974000 21329000 10602 546 9664 90115;90116;90117;90118;90119;90120;90121;90122;90123;90124;90125;90126;90127;90128;90129;90130;90131;90132;90133;90134;90135;90136;90137;90138 72025;72026;72027;72028;72029;72030;72031;72032;72033;72034;72035;72036;72037;72038;72039;72040;72041 72030 705 16 EDLNCQEEEDPMNK Unmodified 1749.6822 0.6821792 546 O75821 EIF3G Eukaryotic translation initiation factor 3 subunit G yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.79 2.98 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 42.093 42.152 2 3.042E-100 40683 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 199.08 199.08 229110000 21665000 0 0 10978000 8171000 12747000 8692400 10896000 8463800 12864000 21871000 33215000 16351000 13716000 49475000 10603 546 9664 90139;90140;90141;90142;90143;90144;90145;90146;90147;90148;90149;90150;90151;90152 72042;72043;72044;72045;72046;72047;72048;72049;72050;72051;72052;72053;72054;72055 72049 13 EDLNGPFLNQLETDPSLDMK Oxidation (M) 2291.0627 0.062742776 5066 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching 8.67 2.98 1 5 1 1 1 1 1 1 85.78 85.092 2 4.0396E-47 104434 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.95 123.58 32794000 0 10092000 0 0 0 0 0 0 0 3388100 4329300 4474500 0 3328000 7182400 10604 5066 9665 90153;90154;90155;90156;90157;90158 72056;72057;72058 72056 6418 3 EDLNGPFLNQLETDPSLDMK Unmodified 2275.0678 0.067828154 5066 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 92.808 87.898 2 2.6039E-09 109132 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.89 88.797 15734000 0 15734000 0 0 0 0 0 0 0 0 0 0 0 0 0 10605 5066 9665 90159 72059;72060 72059 2 EDLNHLVGYK Unmodified 1186.5982 0.59823728 4659 Q9NV35 NUDT15 Probable 8-oxo-dGTP diphosphatase NUDT15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 56.543 50.57 3 0.0074848 65157 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 61.56 35.517 42511000 4632200 34390000 3489000 0 0 0 0 0 0 0 0 0 0 0 0 10606 4659 9666 90160;90161;90162 72061 72061 1 EDLNLRLK Unmodified 999.57129 0.57129425 570 O76003 GLRX3 Glutaredoxin-3 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 53.316 47.281 2 0.026215 65098 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 120.49 18.797 140070000 23152000 0 116920000 0 0 0 0 0 0 0 0 0 0 0 0 10607 570 9667 90163;90164 72062;72063 72062 0 EDLNVNEVFK Unmodified 1205.5928 0.59281755 4989 Q9ULC3 RAB23 Ras-related protein Rab-23 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 70.969 70.802 2 0.043301 81356 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 39.022 22.728 4747400 0 0 0 1170300 0 0 0 0 0 0 3577100 0 0 0 0 10608 4989 9668 90165;90166 72064 72064 1 EDLPAENGETK Unmodified 1201.5463 0.54626129 798 P05114 HMGN1 Non-histone chromosomal protein HMG-14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.75 4.26 2 2 4 2 2 1 1 1 1 43.257 43.084 2 3.4425E-07 99965 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 125.83 107.52 178930000 75349000 43871000 0 0 0 0 4047300 0 0 0 12342000 0 0 16801000 26520000 10609 798 9669 90167;90168;90169;90170;90171;90172;90173;90174 72065;72066;72067;72068;72069 72068 5 EDLPGFVFESNR Unmodified 1408.6623 0.6622941 5004 Q9ULT8 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.44 81.501 2 0.00039657 94324 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 80.706 66.032 83853000 0 0 0 4138300 3648600 8498000 3745300 4990200 5674500 11300000 8279800 9612200 5800800 5921000 12244000 10610 5004 9670 90175;90176;90177;90178;90179;90180;90181;90182;90183;90184;90185;90186 72070;72071;72072;72073;72074;72075;72076;72077;72078;72079;72080;72081 72071 12 EDLPGFVFESNRGTK Unmodified 1694.8264 0.82639932 5004 Q9ULT8 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 0 0 1 By MS/MS 2 0 1 1 78.263 75.635 3 0.006868 91712 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 45.992 38.935 42783000 0 0 42783000 0 0 0 0 0 0 0 0 0 0 0 0 10611 5004 9671 90187 72082;72083 72083 2 EDLPVTEDNFVK Unmodified 1404.6773 0.67727546 696 O95825 CRYZL1 Quinone oxidoreductase-like protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 73.057 67.512 2 0.015707 85280 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.37 42.489 203330000 0 203330000 0 0 0 0 0 0 0 0 0 0 0 0 0 10612 696 9672 90188 72084 72084 1 EDLQELNDR Unmodified 1130.5204 0.52038089 757 P02545 LMNA Prelamin-A/C;Lamin-A/C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 34.348 34.579 2 2.5631E-05 38036 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 153.08 115.52 642800000 0 0 0 55684000 0 43159000 33415000 33720000 20076000 52464000 144890000 76270000 0 57782000 125340000 10613 757 9673 90189;90190;90191;90192;90193;90194;90195;90196;90197;90198 72085;72086;72087;72088;72089;72090;72091;72092;72093 72086 7 EDLQLDKPASGVK Unmodified 1398.7355 0.73545904 1977 P78347 GTF2I General transcription factor II-I yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 2 2 1 1 2 2 2 2 2 2 2 38.527 38.705 2;3 0.0027586 42913 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 68.034 58.966 247760000 0 0 0 22652000 23816000 6353000 14772000 16821000 6684900 34125000 30878000 40088000 0 24258000 27307000 10614 1977 9674 90199;90200;90201;90202;90203;90204;90205;90206;90207;90208;90209;90210;90211;90212;90213;90214;90215;90216;90217;90218 72094;72095;72096;72097;72098;72099;72100;72101;72102;72103 72095 5 EDLRLPEGDLGK Unmodified 1340.6936 0.69359423 1949 P63241 EIF5A Eukaryotic translation initiation factor 5A-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 58.417 58.532 2;3 1.2972E-09 65830 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 133.07 91.67 1799700000 0 0 0 86300000 45411000 110630000 95231000 65809000 53512000 86106000 231970000 181850000 90206000 182020000 570680000 10615 1949 9675 90219;90220;90221;90222;90223;90224;90225;90226;90227;90228;90229;90230;90231;90232;90233;90234;90235;90236;90237;90238;90239;90240;90241;90242 72104;72105;72106;72107;72108;72109;72110;72111;72112;72113;72114;72115;72116;72117;72118;72119;72120;72121;72122;72123;72124 72117 12 EDLRPSAPQQEGEASK Unmodified 1740.8279 0.82785588 574 O76070 SNCG Gamma-synuclein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 6 2 24 2 4 2 2 2 2 2 2 2 2 2 2 2 2 2 26.516 25.582 2;3 2.4266E-60 32042 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 181.26 141.99 8903200000 215540000 1967400000 35595000 309120000 467970000 357210000 410300000 345220000 375600000 433510000 830140000 887540000 489120000 510100000 1268900000 10616 574 9676 90243;90244;90245;90246;90247;90248;90249;90250;90251;90252;90253;90254;90255;90256;90257;90258;90259;90260;90261;90262;90263;90264;90265;90266;90267;90268;90269;90270;90271;90272;90273;90274 72125;72126;72127;72128;72129;72130;72131;72132;72133;72134;72135;72136;72137;72138;72139;72140;72141;72142;72143;72144;72145;72146;72147;72148;72149;72150;72151;72152 72130 28 EDLRSWTAADMAAQTTK Unmodified 1893.8891 0.88907593 754 P01891;P10316;P01892 HLA-A HLA class I histocompatibility antigen, A-68 alpha chain;HLA class I histocompatibility antigen, A-69 alpha chain;HLA class I histocompatibility antigen, A-2 alpha chain yes no 0 0 1 By matching By matching By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 66.941 67.206 3 0.0093667 77125 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 21.676 17.835 13712000 0 0 0 0 0 0 0 2578100 0 2122000 2497000 0 0 2981200 3533900 10617 754 9677 90275;90276;90277;90278;90279 72153;72154 72153 2 EDLSGIAEMFK Oxidation (M) 1254.5802 0.58020395 1492 P46013 MKI67 Antigen KI-67 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 77.046 77.221 2 0.0081556 88890 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 47.603 36.092 28296000 0 0 0 0 0 0 2914400 2501900 2853200 4905900 3196800 0 0 3816200 8108000 10618 1492 9678 90280;90281;90282;90283;90284;90285;90286 72155;72156;72157;72158 72156 2343 4 EDLSGIAEMFK Unmodified 1238.5853 0.58528933 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 89.112 86.736 2 0.013434 107465 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.986 69.156 29771000 0 27418000 0 0 0 0 0 0 0 0 0 0 0 0 2352600 10619 1492 9678 90287;90288 72159;72160 72159 2 EDLSGTQAGLNVIK Unmodified 1443.7569 0.75692277 1790 P57076 C21orf59 UPF0769 protein C21orf59 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 64.506 63.829 2 1.9675E-23 79685 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 158.79 137.92 370520000 0 282430000 0 3842500 2889300 9922500 5465100 5377000 2698900 10236000 9440200 9114200 5927100 6799900 16375000 10620 1790 9679 90289;90290;90291;90292;90293;90294;90295;90296;90297;90298;90299;90300;90301;90302;90303;90304 72161;72162;72163;72164;72165;72166;72167;72168;72169;72170;72171;72172;72173;72174;72175;72176;72177 72164 17 EDLSPAFDHSPNK Unmodified 1455.663 0.66302238 1058 P17706 PTPN2 Tyrosine-protein phosphatase non-receptor type 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.36 2.01 1 10 1 1 1 1 1 1 1 1 1 1 1 40.746 40.41 3 0.010468 49762 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 45.115 31.085 69419000 0 10947000 0 5331200 4035700 4230900 6010500 3462900 4955200 7431600 6912200 0 5568000 0 10534000 10621 1058 9680 90305;90306;90307;90308;90309;90310;90311;90312;90313;90314;90315 72178;72179;72180 72180 3 EDLSWARTLQEQQK Unmodified 1730.8588 0.85876208 2953 Q6PID6 TTC33 Tetratricopeptide repeat protein 33 yes yes 0 0 1 By MS/MS 2 0 1 1 71.892 66.164 3 0.0082676 84000 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 39.005 30.213 14404000 0 14404000 0 0 0 0 0 0 0 0 0 0 0 0 0 10622 2953 9681 90316 72181 72181 1 EDLTDLEQPGSPGYSTATEPGSSELGVPEQPDLQEGTHVEK Unmodified 4322.9826 0.98264436 3615 Q92538 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 0 0 0 By MS/MS 2.5 0.5 2 2 4 82.378 78.375 3;4 7.8146E-61 97328 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.544 86.035 144480000 0 144480000 0 0 0 0 0 0 0 0 0 0 0 0 0 10623 3615 9682 90317;90318;90319;90320 72182;72183;72184 72183 3 EDLTEIR Unmodified 874.43961 0.43961137 808 P05388;Q8NHW5 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like yes no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 36.402 36.531 2 0.025177 39009 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 81.297 41.634 76387000 0 0 0 5222000 4871500 5566800 4416800 5914600 0 9565400 8072800 0 10002000 9088100 13667000 10624 808 9683 90321;90322;90323;90324;90325;90326;90327;90328;90329;90330 72185 72185 1 EDLTEIRDMLLANK Oxidation (M) 1675.8451 0.84508585 808 P05388;Q8NHW5 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like yes no 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.5 1.94 1 15 1 1 1 2 1 1 2 1 1 1 2 2 80.306 79.858 2;3 1.3766E-06 92233 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 92.866 59.778 160930000 15808000 0 0 1605300 2674500 9924800 3711000 0 2150300 25853000 3063100 2702200 2375000 15952000 75107000 10625 808 9684 90331;90332;90333;90334;90335;90336;90337;90338;90339;90340;90341;90342;90343;90344;90345;90346 72186;72187;72188;72189;72190 72189 968 4 EDLTEIRDMLLANK Unmodified 1659.8502 0.85017123 808 P05388;Q8NHW5 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like yes no 0 0 1 By MS/MS By MS/MS By MS/MS 4 3.46 3 1 2 1 1 91.968 84.91 2;3 0.0003832 108243 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.94 62.315 98419000 66536000 31883000 0 0 0 0 0 0 0 0 0 0 0 0 0 10626 808 9684 90347;90348;90349;90350 72191;72192;72193;72194 72191 4 EDLVFIFWAPESAPLK Unmodified 1860.9662 0.96618726 1165;5088 P23528;Q9Y281 CFL1;CFL2 Cofilin-1;Cofilin-2 no no 0 0 0 By MS/MS By MS/MS 2 0.707 1 2 1 3 1 102.28 98.682 2;3 4.7667E-11 117663 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 109.07 104.46 1107800000 1089300000 18551000 0 0 0 0 0 0 0 0 0 0 0 0 0 10627 1165;5088 9685 90351;90352;90353;90354 72195;72196;72197;72198;72199 72198 5 EDLVSQGFTEFTIEDFHNTFMDLIEQVEK Unmodified 3460.6021 0.60206819 3840 Q96FW1 OTUB1 Ubiquitin thioesterase OTUB1 yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 104.83 98.936 3 5.4444E-191 124813 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 200.47 180.21 45121000 43624000 1497900 0 0 0 0 0 0 0 0 0 0 0 0 0 10628 3840 9686 90355;90356 72200;72201;72202 72202 3 EDLVSQGFTEFTIEDFHNTFMDLIEQVEK Oxidation (M) 3476.597 0.59698282 3840 Q96FW1 OTUB1 Ubiquitin thioesterase OTUB1 yes yes 0 1 0 By MS/MS 2 0 1 1 103.8 95.672 3 4.6938E-91 122961 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 135.3 130.04 17359000 17359000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10629 3840 9686 90357 72203 72203 5361 1 EDLYLKPIQR Unmodified 1273.703 0.7030367 980 P13639 EEF2 Elongation factor 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.832 52.975 3 0.016513 59832 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 60.717 51.972 398860000 0 0 0 14300000 9278900 6765800 14434000 17267000 3915900 18408000 53584000 67168000 16686000 30867000 146190000 10630 980 9687 90358;90359;90360;90361;90362;90363;90364;90365;90366;90367;90368;90369 72204;72205;72206;72207 72207 1 EDMAALEK Oxidation (M) 921.41135 0.41134771 1961;3031;4093;1962 P68363;Q71U36;Q9BQE3;P68366 TUBA1B;TUBA1A;TUBA1C;TUBA4A Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 37 3 3 3 3 3 3 3 3 3 4 3 3 12.083 12.233 1;2 0.0076641 11397 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 76.478 35.25 4417200000 0 0 0 309200000 224470000 541030000 352750000 193490000 286700000 373520000 364490000 451330000 474950000 365730000 479520000 10631 1961;3031;4093;1962 9688 90370;90371;90372;90373;90374;90375;90376;90377;90378;90379;90380;90381;90382;90383;90384;90385;90386;90387;90388;90389;90390;90391;90392;90393;90394;90395;90396;90397;90398;90399;90400;90401;90402;90403;90404;90405;90406 72208;72209;72210;72211;72212;72213;72214;72215;72216;72217;72218;72219;72220;72221;72222;72223;72224;72225;72226;72227 72211 3154 19 EDMAALEK Unmodified 905.41643 0.41643309 1961;3031;4093;1962 P68363;Q71U36;Q9BQE3;P68366 TUBA1B;TUBA1A;TUBA1C;TUBA4A Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 27 2 2 2 2 2 3 2 2 2 3 3 2 29.828 30.027 1;2 0.0067231 31833 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 98.458 73.826 8954700000 0 0 0 606660000 334830000 657760000 548570000 446810000 429450000 588860000 840400000 959720000 787840000 873340000 1880500000 10632 1961;3031;4093;1962 9688 90407;90408;90409;90410;90411;90412;90413;90414;90415;90416;90417;90418;90419;90420;90421;90422;90423;90424;90425;90426;90427;90428;90429;90430;90431;90432;90433 72228;72229;72230;72231;72232;72233;72234;72235;72236;72237;72238;72239;72240;72241;72242;72243;72244;72245;72246;72247;72248;72249;72250;72251;72252;72253;72254 72241 24 EDMPPEHVRK Unmodified 1236.5921 0.59210605 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 14.234 14.329 3 0.0034757 13314 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.425 29.413 28017000 0 0 0 0 1983600 4736400 2284400 3068400 1826200 4169100 0 0 0 0 9949400 10633 2930 9689 90434;90435;90436;90437;90438;90439;90440 72255;72256;72257 72256 3 EDMPPEHVRK Oxidation (M) 1252.587 0.58702067 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 8.7225 5.637 3 0.019535 6914 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 42.718 34.831 54476000 9552100 4580300 40343000 0 0 0 0 0 0 0 0 0 0 0 0 10634 2930 9689 90441;90442;90443 72258 72258 4552 1 EDMTYAVRK Unmodified 1111.5332 0.53319418 2145 Q07955 SRSF1 Serine/arginine-rich splicing factor 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 28.405 24.088 2 9.1282E-06 31505 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 167.24 119.39 64800000 9360900 52719000 2720100 0 0 0 0 0 0 0 0 0 0 0 0 10635 2145 9690 90444;90445;90446;90447 72259;72260;72261;72262;72263 72259 5 EDMTYAVRK Oxidation (M) 1127.5281 0.5281088 2145 Q07955 SRSF1 Serine/arginine-rich splicing factor 1 yes yes 0 1 1 By MS/MS 3 0 2 2 15.267 11.742 2 0.015389 14671 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 91.041 73.656 25393000 0 25393000 0 0 0 0 0 0 0 0 0 0 0 0 0 10636 2145 9690 90448;90449 72264;72265 72264 3451 0 EDNDTINDSLIVSETK Unmodified 1791.8374 0.83741751 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.673 67.756 2 2.4209E-07 78088 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 106.49 92.829 103730000 0 0 0 6386800 5711400 9016700 6308700 4764800 7665600 10996000 11735000 11812000 7198100 8444100 13695000 10637 2804 9691 90450;90451;90452;90453;90454;90455;90456;90457;90458;90459;90460;90461 72266;72267;72268;72269;72270;72271;72272;72273 72273 8 EDNFFQVSK Unmodified 1112.5138 0.51383895 3716 Q969G6 RFK Riboflavin kinase yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 56.054 56.46 2 0.0050681 63220 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.615 59.721 16427000 0 0 0 0 0 0 0 0 0 0 5248200 0 0 4196300 6982200 10638 3716 9692 90462;90463;90464 72274;72275 72274 2 EDNGIGILTLNNPSR Unmodified 1611.8216 0.82164829 4638 Q9NTX5 ECHDC1 Ethylmalonyl-CoA decarboxylase yes yes 0 0 0 By matching By MS/MS By matching 10 0 3 1 1 1 77.856 77.984 2 0.0029508 89225 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 58.674 51.411 17132000 0 0 0 0 0 3820200 0 0 0 0 0 0 0 3535000 9776400 10639 4638 9693 90465;90466;90467 72276 72276 1 EDNSLLNQGFLQAKPEK Unmodified 1929.9796 0.97960549 917 P10244 MYBL2 Myb-related protein B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 72.999 73.096 3 0.028452 84223 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 22.826 19.222 67455000 0 0 0 4071400 0 0 5091500 4972800 0 10066000 0 10297000 11599000 6942000 14416000 10640 917 9694 90468;90469;90470;90471;90472;90473;90474;90475 72277 72277 1 EDNYRGPAVR Unmodified 1175.5683 0.56833414 5267 Q9Y678 COPG1 Coatomer subunit gamma-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.061 18.249 3 0.00333 18226 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 60.518 46.058 263550000 0 0 0 13673000 14849000 29717000 16873000 16957000 12780000 32504000 21530000 28274000 20624000 19371000 36397000 10641 5267 9695 90476;90477;90478;90479;90480;90481;90482;90483;90484;90485;90486;90487 72278;72279;72280;72281;72282;72283;72284;72285;72286;72287;72288;72289 72282 2 EDPANILQELPAPLLDDK Unmodified 1990.0259 0.025886985 3807 Q96EB1 ELP4 Elongator complex protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.5 2.93 4 1 1 1 3 1 1 98.178 94.311 2;3 5.1336E-107 116475 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 244 224.87 129050000 12032000 112870000 2501000 0 0 0 0 0 0 0 0 0 0 0 1648800 10642 3807 9696 90488;90489;90490;90491;90492;90493 72290;72291;72292;72293;72294;72295 72290 6 EDPDMASAVAAIR Oxidation (M) 1360.6293 0.62927941 2395 Q14232 EIF2B1 Translation initiation factor eIF-2B subunit alpha yes yes 0 1 0 By MS/MS 10 0 1 1 48.139 48.196 2 0.0074882 54467 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 42.718 27.567 4419600 0 0 0 0 0 4419600 0 0 0 0 0 0 0 0 0 10643 2395 9697 90494 72296 72296 3929 1 EDPDMASAVAAIR Unmodified 1344.6344 0.63436479 2395 Q14232 EIF2B1 Translation initiation factor eIF-2B subunit alpha yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 69.557 70.023 2 0.0031035 79736 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.401 45.135 10177000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10177000 10644 2395 9697 90495;90496 72297;72298 72298 2 EDPEPSTDGTYVWK Unmodified 1622.71 0.71003215 4901 Q9UHG3 PCYOX1 Prenylcysteine oxidase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 58.871 58.89 2 0.00081393 66535 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.408 57.767 24381000 0 0 0 3423800 2682600 2853200 0 2408200 0 2868500 0 0 2634400 2661200 4848900 10645 4901 9698 90497;90498;90499;90500;90501;90502;90503;90504;90505;90506 72299;72300;72301;72302;72303;72304;72305 72300 7 EDPFVFIPEDDPLFPPIEK Unmodified 2243.1038 0.10380295 2168 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3.11 2.47 12 4 2 4 9 3 1 1 99.667 95.763 2;3 1.9074E-35 116970 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 155.98 142.55 1554500000 550570000 912550000 88554000 0 0 0 0 0 0 1440800 0 0 0 0 1359400 10646 2168 9699 90507;90508;90509;90510;90511;90512;90513;90514;90515;90516;90517;90518;90519;90520;90521;90522;90523;90524 72306;72307;72308;72309;72310;72311;72312;72313;72314;72315;72316;72317;72318;72319 72319 9 EDPHQHSTAAEEK Unmodified 1477.6433 0.64334957 2800 Q5THK1 PRR14L Protein PRR14L yes yes 0 0 0 By MS/MS 3 0 1 1 5.8382 2.4769 3 0.030208 3928 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 67.519 48.42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10647 2800 9700 90525 72320 72320 1 EDPNRLHYDPAELK Unmodified 1695.8216 0.82164829 1493 P46019 PHKA2 Phosphorylase b kinase regulatory subunit alpha, liver isoform yes yes 0 0 1 By MS/MS By matching By MS/MS By matching 10 0 4 1 1 1 1 46.776 47.071 3 0.0070843 53019 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 36.022 24.229 21120000 0 0 0 0 0 6160200 0 0 1852600 0 0 0 0 4333000 8774200 10648 1493 9701 90526;90527;90528;90529 72321 72321 1 EDPQTFYYAVAVVK Unmodified 1628.8086 0.80862399 763 P02787 TF Serotransferrin yes yes 0 0 0 By MS/MS 10 0 1 1 83.953 84.145 2 0.0092126 97355 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 48.785 36.155 13089000 0 0 0 0 0 0 0 13089000 0 0 0 0 0 0 0 10649 763 9702 90530 72322 72322 1 EDPTAVACTFSCMMK Oxidation (M) 1762.7034 0.70344869 5267 Q9Y678 COPG1 Coatomer subunit gamma-1 yes yes 0 1 0 By MS/MS 2 0 2 2 75.376 70.328 2 7.9601E-05 88675 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.105 82.566 118030000 0 118030000 0 0 0 0 0 0 0 0 0 0 0 0 0 10650 5267 9703 90531;90532 72323;72324 72324 6667;6668 2 EDPTAVACTFSCMMK Unmodified 1746.7085 0.70853407 5267 Q9Y678 COPG1 Coatomer subunit gamma-1 yes yes 0 0 0 By MS/MS 2 0 1 1 86.594 81.785 2 0.0004835 101534 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.273 83.11 465640000 0 465640000 0 0 0 0 0 0 0 0 0 0 0 0 0 10651 5267 9703 90533 72325 72325 1 EDPTVSALLTSEK Unmodified 1388.7035 0.70349021 1984 P78417 GSTO1 Glutathione S-transferase omega-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.11 3.8 6 1 12 1 5 1 1 1 1 1 1 1 1 1 1 1 1 1 73.988 72.505 2;3 4.0053E-07 83325 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 116.55 91.771 3504300000 62381000 3223000000 12561000 9159100 6990300 6213000 4572700 4555700 3948900 7268000 29704000 23404000 4375200 21464000 84737000 10652 1984 9704 90534;90535;90536;90537;90538;90539;90540;90541;90542;90543;90544;90545;90546;90547;90548;90549;90550;90551;90552 72326;72327;72328;72329;72330;72331;72332;72333;72334;72335;72336 72330 10 EDPVLLQGIR Unmodified 1138.6346 0.63462279 3061 Q7LBC6 KDM3B Lysine-specific demethylase 3B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 71.979 72.039 2 0.0077977 82092 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.478 54.347 112460000 0 0 0 4911400 8037300 9291500 8064800 12211000 0 9955800 9919100 10402000 9440400 9098500 21127000 10653 3061 9705 90553;90554;90555;90556;90557;90558;90559;90560;90561;90562;90563 72337;72338;72339;72340;72341;72342;72343;72344;72345;72346;72347 72340 9 EDQCLMPEAWNVDQGVITK Unmodified 2232.0191 0.019103822 371 O43815 STRN Striatin yes yes 0 0 0 By MS/MS 2 0 1 1 87.771 82.929 3 2.9111E-05 103089 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.763 67.334 43461000 0 43461000 0 0 0 0 0 0 0 0 0 0 0 0 0 10654 371 9706 90564 72348 72348 1 EDQDKVAVLSQNR Unmodified 1500.7532 0.75323437 4207 Q9BWD1 ACAT2 Acetyl-CoA acetyltransferase, cytosolic yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 18.461 18.693 3 0.047783 18907 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 20.857 14.581 58187000 0 0 0 3457100 0 3831000 5823500 4455700 4427000 5909700 4215600 6922400 5055000 2799600 11291000 10655 4207 9707 90565;90566;90567;90568;90569;90570;90571;90572;90573;90574;90575 72349 72349 1 EDQIADNFQGISGPK Unmodified 1617.7635 0.76346471 3340 Q8N573 OXR1 Oxidation resistance protein 1 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 69.921 64.053 2 2.9005E-15 81448 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145.09 119.04 29741000 0 29741000 0 0 0 0 0 0 0 0 0 0 0 0 0 10656 3340 9708 90576;90577 72350;72351;72352 72350 3 EDQIQVIGNLK Unmodified 1255.6772 0.67721588 5201 Q9Y4G6 TLN2 Talin-2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 8 3.46 1 3 1 1 1 1 67.705 66.353 2 0.0010941 83808 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.867 62.2 78565000 0 71391000 0 0 0 3056900 0 0 1331100 0 0 0 0 2786600 0 10657 5201 9709 90578;90579;90580;90581 72353;72354;72355 72354 3 EDQPAVPGETQGDSYFTGK Unmodified 2024.8963 0.89632937 5044 Q9UNX4 WDR3 WD repeat-containing protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 62.272 62.439 2 0.00017276 71783 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 56.951 55.047 57212000 0 0 0 0 2663700 5510400 4687200 3798000 4658100 5230400 5676500 7274700 5169500 4085600 8457500 10658 5044 9710 90582;90583;90584;90585;90586;90587;90588;90589;90590;90591;90592 72356;72357;72358;72359 72358 4 EDQPQGLVPGGAVVVLSGPHR Unmodified 2111.1124 0.112351 3686 Q92917 GPKOW G patch domain and KOW motifs-containing protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.756 79.814 3 6.1456E-08 92189 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 69.765 60.719 347120000 0 0 0 5823300 10733000 28286000 14007000 20138000 24445000 37562000 32605000 38313000 18028000 31028000 86157000 10659 3686 9711 90593;90594;90595;90596;90597;90598;90599;90600;90601;90602;90603;90604 72360;72361;72362;72363;72364;72365;72366;72367;72368;72369;72370;72371;72372 72361 13 EDQSILCTGESGAGK Unmodified 1550.6883 0.68825085 1356;1357;1366;3090 P35579;Q7Z406;P35580;P35749 MYH9;MYH14;MYH10;MYH11 Myosin-9;Myosin-14;Myosin-10;Myosin-11 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.113 40.293 2 4.043E-35 44307 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 153.74 118.2 191420000 0 0 0 11856000 10808000 16973000 10494000 12623000 8181400 15454000 17697000 28899000 18232000 14874000 25330000 10660 1356;3090;1357;1366 9712 90605;90606;90607;90608;90609;90610;90611;90612;90613;90614;90615;90616 72373;72374;72375;72376;72377;72378;72379;72380;72381;72382;72383;72384 72382 12 EDQTEYLEER Unmodified 1310.5626 0.56263964 862;850;2715 P07900;P08238;Q58FF7;Q58FF6 HSP90AA1;HSP90AB1;HSP90AB3P;HSP90AB4P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 4 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.86 3.51 1 3 2 16 2 3 1 2 2 2 1 1 1 1 2 1 1 1 1 40.956 39.934 2 3.924E-16 44645 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 187.82 171.28 17691000000 207240000 434870000 7907300 817620000 620890000 1715200000 913610000 794760000 600590000 1933900000 1651400000 1947600000 1799200000 1259800000 2986400000 10661 850;862;2715 9713 90617;90618;90619;90620;90621;90622;90623;90624;90625;90626;90627;90628;90629;90630;90631;90632;90633;90634;90635;90636;90637;90638 72385;72386;72387;72388;72389;72390;72391;72392;72393;72394;72395;72396;72397;72398;72399;72400;72401;72402;72403;72404;72405;72406;72407;72408;72409;72410;72411;72412;72413;72414;72415;72416;72417;72418;72419 72392 34 EDQTEYLEERR Unmodified 1466.6638 0.66375066 862;850 P07900;P08238;Q58FF7 HSP90AA1;HSP90AB1;HSP90AB3P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.97 2.64 3 1 26 1 2 1 2 2 2 2 2 2 2 3 2 3 2 2 31.716 31.26 2;3 9.6665E-13 39696 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 137.17 127.38 4091000000 158570000 131120000 14711000 140750000 98353000 364050000 244120000 192940000 150410000 314490000 449170000 421310000 304350000 312500000 794120000 10662 850;862 9714 90639;90640;90641;90642;90643;90644;90645;90646;90647;90648;90649;90650;90651;90652;90653;90654;90655;90656;90657;90658;90659;90660;90661;90662;90663;90664;90665;90666;90667;90668 72420;72421;72422;72423;72424;72425;72426;72427;72428;72429;72430;72431;72432;72433;72434;72435;72436 72424 17 EDQTEYLEERRIK Unmodified 1707.8428 0.84277766 850 P07900 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 0 0 2 By MS/MS By MS/MS By MS/MS 2.29 0.452 10 4 6 4 4 42.364 37.214 2;3;4 2.1096E-28 47894 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 181.68 163.41 5893700000 3690100000 322200000 1881400000 0 0 0 0 0 0 0 0 0 0 0 0 10663 850 9715 90669;90670;90671;90672;90673;90674;90675;90676;90677;90678;90679;90680;90681;90682 72437;72438;72439;72440;72441;72442;72443;72444;72445;72446;72447;72448;72449;72450;72451;72452 72450 12 EDQTEYLEERRVK Unmodified 1693.8271 0.8271276 862 P08238;Q58FF7 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 0 0 2 By MS/MS By MS/MS By MS/MS 2.27 0.445 8 3 6 3 2 36.422 31.307 3;4 5.6859E-08 40901 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 111.12 93.422 13758000000 6025100000 528620000 7204000000 0 0 0 0 0 0 0 0 0 0 0 0 10664 862 9716 90683;90684;90685;90686;90687;90688;90689;90690;90691;90692;90693 72453;72454;72455;72456;72457;72458;72459;72460;72461;72462;72463;72464;72465;72466;72467;72468;72469;72470 72467 12 EDQYDHLDAADMTK Unmodified 1650.6832 0.68316548 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.14 3.87 5 2 7 1 5 1 1 1 1 1 1 1 1 48.202 45.611 2;3 9.8314E-39 58312 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 196.02 188.64 1412900000 61186000 1175400000 3485200 0 0 8241600 7928500 0 0 0 22952000 19603000 7771100 24473000 81868000 10665 1337 9717 90694;90695;90696;90697;90698;90699;90700;90701;90702;90703;90704;90705;90706;90707 72471;72472;72473;72474;72475;72476;72477;72478;72479;72480;72481;72482 72474 11 EDQYDHLDAADMTK Oxidation (M) 1666.6781 0.6780801 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 2 3 1 35.157 30.12 2;3 4.1734E-88 39562 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 214.42 201.02 741820000 45140000 691690000 4985400 0 0 0 0 0 0 0 0 0 0 0 0 10666 1337 9717 90708;90709;90710;90711;90712;90713 72483;72484;72485;72486;72487 72485 2014 4 EDRAAQSLLNK Unmodified 1243.6521 0.65206377 4655;5016 Q9NUU7;Q9UMR2 DDX19A;DDX19B ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX19B no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.39 3.7 5 1 12 2 2 2 1 1 1 1 1 1 1 1 1 1 1 1 30.855 29.392 2;3 0.00019547 31546 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 87.184 62.409 626660000 56113000 94384000 169720000 15193000 13151000 26540000 27477000 19808000 22880000 31430000 28545000 25989000 29053000 27526000 38845000 10667 4655;5016 9718 90714;90715;90716;90717;90718;90719;90720;90721;90722;90723;90724;90725;90726;90727;90728;90729;90730;90731 72488;72489;72490;72491;72492;72493;72494;72495;72496;72497;72498;72499;72500;72501;72502;72503;72504;72505;72506;72507;72508;72509;72510 72495 18 EDRFENNELFAK Unmodified 1510.7052 0.70522155 417 O60610 DIAPH1 Protein diaphanous homolog 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.11 3.8 6 1 12 2 3 2 1 1 1 1 1 1 1 1 1 1 1 1 55.031 52.981 2;3 6.3497E-11 72633 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.72 91.366 554200000 101080000 76613000 83482000 10873000 9542300 35473000 14578000 16359000 13203000 27102000 20802000 32947000 31372000 21293000 59476000 10668 417 9719 90732;90733;90734;90735;90736;90737;90738;90739;90740;90741;90742;90743;90744;90745;90746;90747;90748;90749;90750 72511;72512;72513;72514;72515;72516;72517;72518;72519;72520;72521;72522;72523;72524;72525;72526;72527;72528 72520 17 EDRFQEFSNIVIPLIK Unmodified 1947.0466 0.046562847 2828 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog yes yes 0 0 1 By MS/MS 3 0 1 1 97.167 93.858 3 0.00013901 112533 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 73.834 69.93 5588800 0 5588800 0 0 0 0 0 0 0 0 0 0 0 0 0 10669 2828 9720 90751 72529 72529 1 EDRSASSGAEGDVSSEREP Unmodified 1963.8355 0.83552003 3514 Q8TEA8 DTD1 D-tyrosyl-tRNA(Tyr) deacylase 1 yes yes 0 0 2 By MS/MS By MS/MS 2 0 4 2 2 24.92 20.317 2;3 1.2665E-16 27094 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.382 76.066 79173000 12357000 66816000 0 0 0 0 0 0 0 0 0 0 0 0 0 10670 3514 9721 90752;90753;90754;90755 72530;72531;72532;72533 72530 3 EDRSDGSAPSTSTASSK Unmodified 1681.7391 0.73910045 3997 Q96T37 RBM15 Putative RNA-binding protein 15 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.12 3.72 2 1 5 1 2 1 1 1 1 1 7.2487 6.0098 3 9.4362E-05 5289 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 54.103 43.249 64112000 2319800 27511000 0 5140200 4529400 0 0 9181200 7229600 0 0 8201400 0 0 0 10671 3997 9722 90756;90757;90758;90759;90760;90761;90762;90763 72534;72535;72536;72537;72538;72539;72540 72538 7 EDSAPSKPVVGIIYPPPEVR Unmodified 2149.1419 0.1419198 2539 Q15459 SF3A1 Splicing factor 3A subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 78.742 78.22 3 1.0772E-15 89319 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 90.581 81.639 791780000 0 64196000 0 33581000 42974000 44830000 49987000 55522000 35457000 79225000 66661000 85435000 56451000 68344000 109120000 10672 2539 9723 90764;90765;90766;90767;90768;90769;90770;90771;90772;90773;90774;90775;90776;90777 72541;72542;72543;72544;72545;72546;72547;72548;72549;72550;72551;72552;72553 72549 13 EDSAVFYELK Unmodified 1199.571 0.57101948 4168 Q9BUQ8 DDX23 Probable ATP-dependent RNA helicase DDX23 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 69.472 68.578 2 0.0060523 86440 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.998 68.617 293600000 0 138700000 2234200 8690100 10180000 10933000 10649000 11650000 13212000 16279000 18582000 23069000 15317000 14107000 0 10673 4168 9724 90778;90779;90780;90781;90782;90783;90784;90785;90786;90787;90788;90789;90790;90791 72554;72555;72556;72557;72558;72559;72560;72561;72562;72563;72564;72565 72557 7 EDSAYGSQSVEQEAEK Unmodified 1755.7435 0.74351713 2042 Q00653 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.441 33.627 2 1.4136E-31 36596 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 180.18 170.89 125780000 0 0 0 4850700 5451000 8965500 6630500 7983700 5400200 13993000 16932000 14406000 13749000 10162000 17253000 10674 2042 9725 90792;90793;90794;90795;90796;90797;90798;90799;90800;90801;90802;90803 72566;72567;72568;72569;72570;72571;72572;72573;72574;72575;72576;72577 72571 12 EDSEWQASLRK Unmodified 1347.6419 0.64189301 4430 Q9H788 SH2D4A SH2 domain-containing protein 4A yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 42.149 37.65 3 0.013102 47421 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 48.004 37.678 20588000 0 12860000 7727300 0 0 0 0 0 0 0 0 0 0 0 0 10675 4430 9726 90804;90805;90806 72578;72579 72579 1 EDSGMVPLIIPVSVPVR Oxidation (M) 1822.9863 0.98627078 2958 Q6PJG2 ELMSAN1 ELM2 and SANT domain-containing protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 91.946 91.959 2 0.0003678 106799 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 57.175 45.309 16089000 0 0 0 561200 2133700 0 0 0 0 3972700 2647800 3219800 0 0 3554300 10676 2958 9727 90807;90808;90809;90810;90811;90812 72580;72581;72582;72583;72584 72580 4585 5 EDSGSVPSTGPSQGTPISLK Unmodified 1942.9484 0.94836495 2234 Q13111 CHAF1A Chromatin assembly factor 1 subunit A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.085 60.19 2 9.8625E-15 67916 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 112.15 102.31 136410000 0 0 0 6797700 8364800 8200300 9259000 7922400 6792900 12654000 17935000 14888000 10851000 13869000 18874000 10677 2234 9728 90813;90814;90815;90816;90817;90818;90819;90820;90821;90822;90823;90824 72585;72586;72587;72588;72589;72590;72591;72592;72593;72594;72595;72596 72588 12 EDSHPFDLGLYNEAVK Unmodified 1832.8581 0.85809337 1346 P35244 RPA3 Replication protein A 14 kDa subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 81.888 77.222 3 2.6515E-07 97004 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.2 95.308 358900000 63302000 280650000 14939000 0 0 0 0 0 0 0 0 0 0 0 0 10678 1346 9729 90825;90826;90827;90828 72597;72598;72599;72600;72601 72597 5 EDSIENVRETDSSNC Unmodified 1753.7061 0.70608576 6 A0MZ66 KIAA1598 Shootin-1 yes yes 0 0 1 By MS/MS 2 0 1 1 32.931 28.397 2 0.0031377 37152 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.143 71.249 6197600 0 6197600 0 0 0 0 0 0 0 0 0 0 0 0 0 10679 6 9730 90829 72602 72602 1 EDSLAQAGETINALK Unmodified 1558.7839 0.7838658 5278 Q9Y6D9 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.72 2.86 2 1 15 3 1 1 1 1 2 2 2 2 1 2 74.496 73.86 2;3 1.8816E-42 91060 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 188.96 172.82 727530000 0 327280000 0 4489300 4978800 0 4972400 0 25957000 52341000 53762000 64075000 47649000 45688000 96335000 10680 5278 9731 90830;90831;90832;90833;90834;90835;90836;90837;90838;90839;90840;90841;90842;90843;90844;90845;90846;90847 72603;72604;72605;72606;72607;72608;72609;72610;72611;72612;72613;72614;72615;72616 72604 12 EDSLDSVLFLK Unmodified 1264.6551 0.65508346 2332;2331 Q13619;Q13620 CUL4A;CUL4B Cullin-4A;Cullin-4B no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 86.935 87.062 2 0.0022931 100696 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.371 48.041 12154000 0 0 0 0 0 1579500 1124800 0 0 1859600 1246500 1315200 784330 1011700 3231900 10681 2331;2332 9732 90848;90849;90850;90851;90852;90853;90854;90855 72617;72618;72619 72619 3 EDSLSEESADAR Unmodified 1307.5477 0.54771785 4197 Q9BVS4 RIOK2 Serine/threonine-protein kinase RIO2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 22.074 22.578 2 0.0083945 23184 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.981 0 11872000 0 0 0 0 0 0 0 0 0 0 0 5500500 6371100 0 0 10682 4197 9733 90856;90857 72620;72621 72621 2 EDSLWSAK Unmodified 934.43961 0.43961137 448 O60934 NBN Nibrin yes yes 0 0 0 By MS/MS 2 0 1 1 45.117 39.796 2 0.010984 51471 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.81 80.139 41633000 0 41633000 0 0 0 0 0 0 0 0 0 0 0 0 0 10683 448 9734 90858 72622;72623 72622 2 EDSNIRENSAGAGK Unmodified 1446.6699 0.66989867 4262 Q9BZE2 PUS3 tRNA pseudouridine(38/39) synthase yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 9.0601 5.7515 3 0.00039334 8432 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.722 55.098 22443000 0 22443000 0 0 0 0 0 0 0 0 0 0 0 0 0 10684 4262 9735 90859;90860 72624 72624 1 EDSNLTLQEK Unmodified 1175.567 0.56699673 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.94 3.58 1 3 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34.935 34.545 2 3.2846E-32 32581 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 182.76 163.67 2165600000 64268000 46178000 2491500 209210000 125410000 201740000 156930000 113070000 127200000 180990000 190270000 184650000 172250000 130100000 260840000 10685 1518 9736 90861;90862;90863;90864;90865;90866;90867;90868;90869;90870;90871;90872;90873;90874;90875;90876 72625;72626;72627;72628;72629;72630;72631;72632;72633;72634;72635;72636;72637;72638;72639;72640;72641;72642;72643;72644;72645;72646;72647;72648 72628 24 EDSNSLTLNHEAEK Unmodified 1585.722 0.72199382 3117 Q7Z6M1 RABEPK Rab9 effector protein with kelch motifs yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 30.665 26.271 3 7.7783E-24 33043 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 127.02 113.6 98066000 0 98066000 0 0 0 0 0 0 0 0 0 0 0 0 0 10686 3117 9737 90877;90878 72649 72649 1 EDSPGLLQFEVCPLSESR Unmodified 2061.9677 0.96772018 2558 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 87.938 88.051 2 0.0022832 101870 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.382 30.822 4890900 0 0 0 0 0 0 0 0 0 0 0 0 1206100 1356000 2328800 10687 2558 9738 90879;90880;90881 72650;72651 72651 2 EDSQPPTPVSQR Unmodified 1339.6368 0.63680763 3660 Q92785 DPF2 Zinc finger protein ubi-d4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 24.588 24.798 2 0.010187 25752 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 46.819 32.145 57610000 0 0 0 5382500 0 8702700 4531900 2101600 6388500 4258100 4798700 0 4329700 5698600 11418000 10688 3660 9739 90882;90883;90884;90885;90886;90887;90888;90889;90890;90891 72652;72653;72654;72655;72656 72654 5 EDSQPPTPVSQRSEEQK Unmodified 1940.9076 0.90756276 3660 Q92785 DPF2 Zinc finger protein ubi-d4 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 25.228 21.076 3 0.022873 27710 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 32.387 22.599 15819000 0 15819000 0 0 0 0 0 0 0 0 0 0 0 0 0 10689 3660 9740 90892;90893 72657 72657 1 EDSQRPGAHLTVK Unmodified 1436.7372 0.73719038 891 P09651;Q32P51 HNRNPA1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 19.239 19.462 3 0.0014004 18303 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.286 42.277 1304500000 0 0 0 70253000 43405000 61867000 0 63407000 0 104120000 160360000 250500000 107470000 134910000 308240000 10690 891 9741 90894;90895;90896;90897;90898;90899;90900;90901;90902;90903 72658;72659;72660;72661;72662;72663;72664;72665;72666;72667 72660 5 EDSSLPTFK Unmodified 1022.492 0.49204087 2956 Q6PIW4 FIGNL1 Fidgetin-like protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 49.624 49.683 2 0.037696 56165 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 64.268 17.274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10691 2956 9742 90904 72668 72668 1 EDSSSAEFLEK Unmodified 1240.5459 0.54592694 2323 Q13596 SNX1 Sorting nexin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 41.282 40.909 2 0.0004366 46040 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 85.355 52.514 196410000 16551000 0 0 7502100 10179000 18399000 12127000 12434000 7891600 17563000 23565000 18360000 12334000 16025000 23481000 10692 2323 9743 90905;90906;90907;90908;90909;90910;90911;90912;90913;90914;90915;90916;90917 72669;72670;72671;72672;72673;72674;72675;72676;72677;72678;72679;72680;72681;72682 72669 9 EDSSSGLMNTLLNGHK Unmodified 1701.7992 0.79919829 4800 Q9P0W2 HMG20B SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 75.075 75.125 3 0.0014947 86684 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.177 44.572 59396000 0 0 0 1369700 1821100 7713600 0 4430600 4137300 5779200 4661600 8424400 3419000 5092100 12548000 10693 4800 9744 90918;90919;90920;90921;90922;90923;90924;90925;90926;90927;90928 72683;72684;72685;72686;72687;72688;72689;72690 72690 8 EDSSSTEFVEK Unmodified 1256.5408 0.54084156 428 O60749 SNX2 Sorting nexin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.34 1 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 32.757 32.595 2 0.00025931 29497 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 91.584 86.218 270220000 55577000 7830000 0 11725000 10621000 22408000 13016000 11830000 9048400 21499000 19457000 21240000 20296000 18280000 27396000 10694 428 9745 90929;90930;90931;90932;90933;90934;90935;90936;90937;90938;90939;90940;90941;90942;90943 72691;72692;72693;72694;72695;72696;72697;72698;72699;72700;72701;72702;72703;72704;72705;72706 72706 16 EDSTTFAK Unmodified 897.40798 0.40797689 3573 Q8WWI1 LMO7 LIM domain only protein 7 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 13.67 13.817 2 0.010604 12981 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 79.116 44.011 56368000 0 0 0 5335500 4692700 5811800 5433100 6175400 5142400 0 6381900 6918600 0 0 10477000 10695 3573 9746 90944;90945;90946;90947;90948;90949;90950;90951;90952 72707;72708;72709;72710 72710 4 EDSVKPGAHLTVK Unmodified 1379.7409 0.74087877 1679 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 25.735 25.939 3 0.029824 26727 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 27.005 19.55 120070000 0 0 0 5903600 3829000 2779900 7001100 6131100 2851000 0 15189000 26271000 11271000 13046000 25797000 10696 1679 9747 90953;90954;90955;90956;90957;90958;90959;90960;90961;90962;90963 72711 72711 1 EDSYKPIVEFIDAQFEAYLQEELK Unmodified 2903.4117 0.41167187 2373 Q14141 SEPT6 Septin-6 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 103.33 97.836 3 1.4018E-131 122625 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 188.24 179.8 34170000 28757000 5412800 0 0 0 0 0 0 0 0 0 0 0 0 0 10697 2373 9748 90964;90965;90966 72712;72713;72714 72714 3 EDTCAAVGEISVNTSVAFLPYMESVFEEVFK Unmodified 3467.6153 0.61527542 3522 Q8TEX9 IPO4 Importin-4 yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 2 2 2 2 105.95 100.89 3 1.0772E-15 125804 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.733 66.828 40975000 25590000 15385000 0 0 0 0 0 0 0 0 0 0 0 0 0 10698 3522 9749 90967;90968;90969;90970 72715;72716;72717 72717 3 EDTDVADGCRETPTK Unmodified 1692.7261 0.72609292 3226 Q8IVF2 AHNAK2 Protein AHNAK2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.86 3.4 1 1 5 2 1 1 1 1 1 19.674 18.796 3 0.0036625 18570 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.621 35.906 27899000 0 15983000 0 0 1547800 0 0 0 2069900 0 0 3270100 0 1599700 3429100 10699 3226 9750 90971;90972;90973;90974;90975;90976;90977 72718;72719;72720;72721 72719 4 EDTEEHHLR Unmodified 1164.516 0.51596421 1141;891 P22626;P09651;Q32P51 HNRNPA2B1;HNRNPA1;HNRNPA1L2 Heterogeneous nuclear ribonucleoproteins A2/B1;Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 no no 0 0 0 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 5.6803 5.8976 3 0.0043235 3475 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.948 54.987 14936000 0 0 0 0 0 0 0 0 0 0 795190 873600 623000 0 12644000 10700 1141;891 9751 90978;90979;90980;90981 72722 72722 1 EDTEEHHLRDYFEEYGK Unmodified 2195.9396 0.93959117 1141 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.3 0.458 7 3 6 3 1 72.184 65.961 3;4 3.3458E-63 87374 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 164.01 161.97 2894300000 2641900000 242890000 9552400 0 0 0 0 0 0 0 0 0 0 0 0 10701 1141 9752 90982;90983;90984;90985;90986;90987;90988;90989;90990;90991 72723;72724;72725;72726;72727;72728;72729;72730;72731;72732;72733;72734 72732 11 EDTEEHHLRDYFEQYGK Unmodified 2194.9556 0.95557559 891 P09651;Q32P51 HNRNPA1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 yes no 0 0 1 By MS/MS By MS/MS By MS/MS 2 0.471 1 7 1 5 2 2 75.594 71.37 3;4 3.5385E-46 95890 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 134 105.53 1192200000 1166200000 17405000 8615400 0 0 0 0 0 0 0 0 0 0 0 0 10702 891 9753 90992;90993;90994;90995;90996;90997;90998;90999;91000 72735;72736;72737;72738;72739;72740;72741 72738 7 EDTEEYNLR Unmodified 1167.5044 0.50439647 1679 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 30.228 30.567 2 0.0034522 32870 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 94.302 81.775 44947000 0 0 0 0 0 0 2060100 3201700 2798200 4286200 6791000 7488800 7079800 0 11241000 10703 1679 9754 91001;91002;91003;91004;91005;91006;91007;91008;91009;91010 72742;72743;72744;72745;72746;72747;72748;72749;72750 72749 9 EDTEEYNLRDYFEK Unmodified 1849.8006 0.80063808 1679 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.4 3.68 4 1 10 2 2 1 1 1 1 1 1 1 1 1 1 1 74.159 72.412 2;3 1.0923E-116 92459 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 232.42 213.67 504190000 238120000 116640000 18503000 4206900 0 8572100 0 10374000 6535900 9852300 11641000 13286000 7183500 16379000 42891000 10704 1679 9755 91011;91012;91013;91014;91015;91016;91017;91018;91019;91020;91021;91022;91023;91024;91025 72751;72752;72753;72754;72755;72756;72757;72758;72759;72760;72761;72762;72763;72764;72765 72759 15 EDTESLEIFQNEVAR Unmodified 1778.8323 0.83227255 4123 Q9BS26 ERP44 Endoplasmic reticulum resident protein 44 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 79.834 79.857 2 1.0257E-05 92302 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 102.4 90.868 36153000 0 0 0 0 5303500 6787500 5831900 0 0 0 18230000 0 0 0 0 10705 4123 9756 91026;91027;91028;91029;91030 72766;72767;72768;72769;72770 72770 5 EDTESLEIFQNEVARQLISEK Unmodified 2477.2286 0.22856255 4123 Q9BS26 ERP44 Endoplasmic reticulum resident protein 44 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 95.798 90.649 3 5.2655E-59 114086 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 130.05 116.03 88513000 50218000 34157000 4136900 0 0 0 0 0 0 0 0 0 0 0 0 10706 4123 9757 91031;91032;91033 72771;72772;72773 72772 3 EDTETIK Unmodified 834.39708 0.39707786 2125 Q06210 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 9.1919 5.6771 2 0.039422 8066 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.297 52.768 36984000 17479000 19504000 0 0 0 0 0 0 0 0 0 0 0 0 0 10707 2125 9758 91034;91035 72774 72774 1 EDTFDVFR Unmodified 1027.4611 0.4610751 3252 Q8IX01 SUGP2 SURP and G-patch domain-containing protein 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 69.596 69.681 2 0.012232 79407 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.109 45.96 12434000 0 0 0 1312300 0 0 0 0 0 0 0 3541000 3384400 0 4196400 10708 3252 9759 91036;91037;91038;91039 72775 72775 1 EDTLLTTMLR Unmodified 1191.6169 0.61692381 2857 Q68DC2 ANKS6 Ankyrin repeat and SAM domain-containing protein 6 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 82.826 83.023 2 0.021365 96108 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 54.982 43.471 8004300 0 0 0 0 0 0 0 2278200 0 0 0 0 0 0 5726000 10709 2857 9760 91040;91041 72776 72776 1 EDTMEVEEFLK Oxidation (M) 1384.6068 0.60681264 1462;731 P00519;P42684 ABL1;ABL2 Tyrosine-protein kinase ABL1;Abelson tyrosine-protein kinase 2 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 72.704 72.309 2 0.00026227 82836 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.67 70.705 84951000 0 23551000 0 2787700 5552800 5819300 5265300 0 0 7779900 5812400 9917100 7397100 4881500 6187300 10710 731;1462 9761 91042;91043;91044;91045;91046;91047;91048;91049;91050;91051;91052;91053 72777;72778;72779;72780;72781;72782;72783;72784;72785;72786;72787;72788 72781 882 12 EDTMEVEEFLK Unmodified 1368.6119 0.61189801 1462;731 P00519;P42684 ABL1;ABL2 Tyrosine-protein kinase ABL1;Abelson tyrosine-protein kinase 2 no no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 80.397 80.502 2 0.009692 93018 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 65.535 53.942 27467000 0 0 0 0 1140200 1828300 954690 2466600 1238000 3843200 2963200 3132000 1724300 1822800 6353900 10711 731;1462 9761 91054;91055;91056;91057;91058;91059;91060;91061;91062;91063;91064 72789;72790 72790 1 EDTSFAENDIK Unmodified 1267.5568 0.55682598 1396 P38398 BRCA1 Breast cancer type 1 susceptibility protein yes yes 0 0 0 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 39.599 40.019 2 0.0068595 43469 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.213 48.768 10994000 0 0 0 0 0 0 0 0 2052500 0 2822200 0 2716600 0 3403100 10712 1396 9762 91065;91066;91067;91068 72791 72791 0 EDTYPEESR Unmodified 1124.4622 0.46219731 2770 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 15.531 15.618 2 0.0083723 14769 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 69.812 62.14 20843000 0 0 0 1548500 1401700 2437500 2127000 0 1634900 4094100 4828700 0 0 2770300 0 10713 2770 9763 91069;91070;91071;91072;91073;91074;91075;91076;91077 72792;72793;72794;72795 72792 3 EDVAGHPGAEVALVGGLK Unmodified 1717.8999 0.89989861 2814 Q5VTE6 ANGEL2 Protein angel homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 75.898 70.513 3 0.0027455 88249 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 32.858 23.288 56259000 8585000 41436000 6237200 0 0 0 0 0 0 0 0 0 0 0 0 10714 2814 9764 91078;91079;91080 72796;72797 72796 2 EDVCYVSQDFYR Unmodified 1579.6613 0.66130782 4295 Q9GZN1 ACTR6 Actin-related protein 6 yes yes 0 0 0 By MS/MS 10 0 1 1 67.354 67.872 2 0.033408 77159 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.79 46.121 4632500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4632500 10715 4295 9765 91081 72798 72798 0 EDVDAAVK Unmodified 845.41306 0.41306227 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.219 16.396 2 0.013906 16111 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 71.342 36.237 469320000 0 0 0 14898000 19096000 39766000 29931000 22546000 29742000 40239000 46455000 48105000 50102000 52610000 75826000 10716 848 9766 91082;91083;91084;91085;91086;91087;91088;91089;91090;91091;91092;91093 72799;72800;72801;72802;72803;72804 72803 6 EDVDDLVSQLR Unmodified 1287.6307 0.63065962 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 79.428 79.551 2 0.0003091 91950 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 111.61 83.865 25444000 0 0 0 0 0 9681300 2061700 4449600 4504000 0 0 0 4747700 0 0 10717 965 9767 91094;91095;91096;91097;91098;91099;91100;91101;91102;91103 72805;72806;72807;72808;72809;72810;72811;72812;72813;72814 72805 8 EDVDDLVSQLRQTEEQVNDLK Unmodified 2472.198 0.1979907 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 3 2 1 95.781 90.728 3 1.0444E-37 113459 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 112.44 108.13 125120000 70993000 44073000 10055000 0 0 0 0 0 0 0 0 0 0 0 0 10718 965 9768 91104;91105;91106;91107;91108;91109 72815;72816;72817;72818;72819;72820 72819 5 EDVDPHNGADDVFSSSGSLGK Unmodified 2131.9294 0.92942042 4660 Q9NV56 MRGBP MRG/MORF4L-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 58.923 58.26 3 0.00011732 65872 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.656 39.947 153590000 0 78696000 0 0 4746000 6018500 4797500 4641100 5482500 6066400 9174900 6505300 7314900 7423200 12726000 10719 4660 9769 91110;91111;91112;91113;91114;91115;91116;91117;91118;91119;91120;91121;91122 72821;72822;72823;72824;72825;72826;72827;72828 72824 7 EDVEVAESPLR Unmodified 1242.6092 0.6091959 4023 Q99567 NUP88 Nuclear pore complex protein Nup88 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.105 51.254 2 1.135E-59 57237 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 193.38 164.46 537060000 0 0 0 30332000 31968000 37505000 35312000 52712000 21451000 52049000 40376000 70143000 42195000 48695000 74320000 10720 4023 9770 91123;91124;91125;91126;91127;91128;91129;91130;91131;91132;91133;91134 72829;72830;72831;72832;72833;72834;72835;72836;72837;72838;72839;72840;72841;72842;72843;72844 72842 16 EDVFVHQTAIK Unmodified 1285.6667 0.6666512 1955;1044 P67809;Q9Y2T7;P16989 YBX1;YBX2;YBX3 Nuclease-sensitive element-binding protein 1;Y-box-binding protein 2;Y-box-binding protein 3 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 6 2 24 3 3 2 2 2 2 2 2 2 2 2 2 2 2 2 45.99 44.886 2;3 0 50209 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 265.31 214.71 12096000000 113470000 401370000 256570000 477030000 627760000 886020000 704430000 616500000 664370000 1019000000 1017900000 1510500000 1450000000 1012300000 1338200000 10721 1955;1044 9771 91135;91136;91137;91138;91139;91140;91141;91142;91143;91144;91145;91146;91147;91148;91149;91150;91151;91152;91153;91154;91155;91156;91157;91158;91159;91160;91161;91162;91163;91164;91165;91166 72845;72846;72847;72848;72849;72850;72851;72852;72853;72854;72855;72856;72857;72858;72859;72860;72861;72862;72863;72864;72865;72866;72867;72868;72869;72870;72871;72872;72873;72874;72875;72876;72877;72878;72879;72880;72881;72882;72883;72884;72885;72886;72887;72888 72867 39 EDVFVHQTAIKK Unmodified 1413.7616 0.76161421 1955;1044 P67809;P16989 YBX1;YBX3 Nuclease-sensitive element-binding protein 1;Y-box-binding protein 3 no no 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.3 2.25 2 21 1 1 1 2 1 2 2 1 2 2 2 2 2 2 34.709 34.466 2;3 9.1499E-06 38058 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 112.85 96.648 864770000 25532000 0 19086000 63641000 82027000 9381900 106750000 50936000 15347000 51465000 81770000 133280000 82340000 70287000 72929000 10722 1955;1044 9772 91167;91168;91169;91170;91171;91172;91173;91174;91175;91176;91177;91178;91179;91180;91181;91182;91183;91184;91185;91186;91187;91188;91189 72889;72890;72891;72892;72893;72894;72895;72896;72897;72898;72899;72900;72901;72902;72903;72904 72903 9 EDVGDEGEEEK Unmodified 1234.4837 0.48372061 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 10.076 10.214 2 0.00014251 8642 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 109.29 105.36 196020000 0 0 0 10684000 8292000 16425000 12995000 10675000 8600200 14695000 22709000 26422000 16194000 20274000 28053000 10723 2392 9773 91190;91191;91192;91193;91194;91195;91196;91197;91198;91199;91200;91201 72905;72906;72907;72908;72909;72910;72911;72912;72913;72914;72915;72916;72917 72915 13 EDVGTVVGIDLGTTYSCVGVFK Unmodified 2315.1355 0.13551379 932 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.31 0.462 9 4 6 5 2 95.16 90.124 2;3 5.4692E-94 113187 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 212.24 179.04 619460000 518950000 69115000 31389000 0 0 0 0 0 0 0 0 0 0 0 0 10724 932 9774 91202;91203;91204;91205;91206;91207;91208;91209;91210;91211;91212;91213;91214 72918;72919;72920;72921;72922;72923;72924;72925;72926;72927;72928;72929;72930 72918 12 EDVITHLQEK Unmodified 1210.6194 0.61936665 3665 Q92805 GOLGA1 Golgin subfamily A member 1 yes yes 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 38.313 38.335 2 0.0099222 42322 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 56.916 34.83 25052000 0 0 0 2127200 2985000 0 2479500 3009200 2837300 0 5118100 0 0 6495600 0 10725 3665 9775 91215;91216;91217;91218;91219;91220;91221 72931 72931 1 EDVLLPQQLNDFCK Unmodified 1717.8345 0.83452116 4882 Q9UGK8 SERGEF Secretion-regulating guanine nucleotide exchange factor yes yes 0 0 0 By MS/MS 2 0 1 1 87.052 82.243 2 0.00082062 102279 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.937 74.995 19947000 0 19947000 0 0 0 0 0 0 0 0 0 0 0 0 0 10726 4882 9776 91222 72932 72932 1 EDVLTLLLPVMGDSK Oxidation (M) 1644.8644 0.86442431 2252 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 0 1 0 By MS/MS 10 0 1 1 95.435 95.581 2 0.0011425 110835 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.284 40.052 1596000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1596000 10727 2252 9777 91223 72933 72933 3660 1 EDVMTCLIK Unmodified 1107.5304 0.53041699 4666 Q9NVE7 PANK4 Pantothenate kinase 4 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 70.125 69.796 2 0.036457 80099 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 45.68 27.645 8029300 0 0 0 3605700 0 4423600 0 0 0 0 0 0 0 0 0 10728 4666 9778 91224;91225 72934 72934 1 EDVNEAIR Unmodified 944.45632 0.45632407 1334 P33993 MCM7 DNA replication licensing factor MCM7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.581 23.759 2 0.0063466 24702 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 101.64 50.677 250750000 0 0 0 12940000 8790400 22352000 15159000 10979000 9341300 21428000 0 35422000 23802000 26379000 64155000 10729 1334 9779 91226;91227;91228;91229;91230;91231;91232;91233;91234;91235;91236;91237 72935;72936;72937;72938;72939;72940;72941;72942;72943;72944;72945;72946;72947 72944 12 EDVNEAIRLMEMSK Oxidation (M) 1679.7859 0.78585641 1334 P33993 MCM7 DNA replication licensing factor MCM7 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 76.397 71.357 3 0.00062048 94488 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.633 72.779 85076000 11752000 58300000 15023000 0 0 0 0 0 0 0 0 0 0 0 0 10730 1334 9780 91238;91239;91240;91241 72948;72949;72950;72951 72948 2006;2007 4 EDVNEAIRLMEMSK Unmodified 1663.7909 0.79094179 1334 P33993 MCM7 DNA replication licensing factor MCM7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 84.095 79.448 3 1.1381E-14 99575 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.96 104.13 144470000 17858000 110610000 16004000 0 0 0 0 0 0 0 0 0 0 0 0 10731 1334 9780 91242;91243;91244;91245 72952;72953;72954;72955 72952 3 EDVNEAIRLMEMSK 2 Oxidation (M) 1695.7808 0.78077103 1334 P33993 MCM7 DNA replication licensing factor MCM7 yes yes 0 2 1 By MS/MS 3 0 1 1 53.512 48.623 3 0.0079518 60081 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 43.184 40.822 6506100 0 6506100 0 0 0 0 0 0 0 0 0 0 0 0 0 10732 1334 9780 91246 72956 72956 2006;2007 0 EDVNFQDNEK Unmodified 1236.5259 0.5258602 251 O15084 ANKRD28 Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 26.364 26.814 2 0.015115 27665 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.156 48.953 10185000 0 0 0 0 0 0 0 0 0 0 0 0 3206400 2950800 4027700 10733 251 9781 91247;91248;91249;91250 72957;72958 72957 2 EDVPSER Unmodified 830.37701 0.37701112 59 CON__P02662 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 11.038 11.128 2 0.022535 8747 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 104.76 53.727 + 1963100000 0 0 0 270690000 160900000 314010000 213770000 150750000 124640000 166430000 0 273420000 161860000 126630000 0 10734 59 9782 91251;91252;91253;91254;91255;91256;91257;91258;91259;91260 72959;72960;72961;72962 72961 3 EDVQHSIITDLQNGNDQTR Unmodified 2182.0251 0.025052137 1234 P28340 POLD1 DNA polymerase delta catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 67.704 67.926 3 2.9542E-06 77077 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 71.969 63.369 156830000 0 0 0 0 0 15478000 9718900 15743000 12736000 0 19616000 17987000 16196000 24780000 24572000 10735 1234 9783 91261;91262;91263;91264;91265;91266;91267;91268;91269 72963;72964;72965;72966;72967;72968;72969;72970;72971;72972;72973;72974 72971 12 EDVQRQQEREK Unmodified 1443.7066 0.70661853 4010 Q99459 CDC5L Cell division cycle 5-like protein yes yes 0 0 2 By MS/MS 2 0 1 1 5.6231 3.4181 3 1.1859E-08 5020 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 133.89 109.43 186000000 0 0 186000000 0 0 0 0 0 0 0 0 0 0 0 0 10736 4010 9784 91270 72975 72975 1 EDVRNNSVWNQR Unmodified 1515.7179 0.71785192 1567 P49354 FNTA Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha yes yes 0 0 1 By MS/MS 10 0 1 1 32.057 32.773 3 0.022218 34792 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 27.681 19.957 7646700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7646700 10737 1567 9785 91271 72976 72976 1 EDVSASGPSPEATQLAK Unmodified 1685.8108 0.81080883 3999 Q96T58 SPEN Msx2-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.405 45.575 2 0.00015222 51811 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 71.241 62.052 81451000 0 0 0 4602400 4455900 5588300 4235000 3934600 6120000 7931900 7033600 10317000 10764000 7131700 9335900 10738 3999 9786 91272;91273;91274;91275;91276;91277;91278;91279;91280;91281;91282;91283 72977;72978;72979 72978 3 EDVSESVGASGQRPVFCPVHK Unmodified 2284.0906 0.090629281 5052 Q9UPN9 TRIM33 E3 ubiquitin-protein ligase TRIM33 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 52.507 52.735 4 0.049352 59603 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 21.2 17.094 40545000 0 0 0 0 0 6554300 0 0 5166300 0 6615200 0 14132000 8077600 0 10739 5052 9787 91284;91285;91286;91287;91288 72980 72980 1 EDVSLHGYK Unmodified 1046.5033 0.50327426 2190 Q12792 TWF1 Twinfilin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 6.12 3.89 3 1 4 1 2 1 1 1 1 1 30.102 27.977 2 0.00039119 37196 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.02 71.58 159790000 13172000 119180000 9711900 0 0 2286500 0 0 0 0 3961300 0 0 3435500 8046700 10740 2190 9788 91289;91290;91291;91292;91293;91294;91295;91296 72981;72982;72983;72984;72985;72986 72981 6 EDVSLHGYKK Unmodified 1174.5982 0.59823728 2190 Q12792 TWF1 Twinfilin-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.4 3.68 4 1 10 2 1 2 1 1 1 1 1 1 1 1 1 1 20.801 19.61 2;3 0.0020943 25256 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 67.207 57.319 182230000 50722000 5461600 75603000 3830900 2187900 0 3473300 4012600 1242000 4484900 6786400 8510200 2711900 0 13200000 10741 2190 9789 91297;91298;91299;91300;91301;91302;91303;91304;91305;91306;91307;91308;91309;91310;91311 72987;72988;72989;72990;72991;72992;72993;72994;72995 72992 7 EDVSTLIGDDLASCK Unmodified 1621.7505 0.75051676 4176 Q9BV44 THUMPD3 THUMP domain-containing protein 3 yes yes 0 0 0 By MS/MS 2 0 1 1 82.195 77.49 2 7.1447E-10 96359 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.09 91.462 88056000 0 88056000 0 0 0 0 0 0 0 0 0 0 0 0 0 10742 4176 9790 91312 72996;72997 72996 2 EDVTERQSTK Unmodified 1191.5731 0.57314474 5073 Q9UQR0 SCML2 Sex comb on midleg-like protein 2 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 6.5579 3.2558 2 2.5946E-47 5294 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 230.06 151.91 26281000 0 26281000 0 0 0 0 0 0 0 0 0 0 0 0 0 10743 5073 9791 91313;91314 72998;72999 72998 2 EDVYRGPAIR Unmodified 1174.6095 0.60947067 4839 Q9UBF2 COPG2 Coatomer subunit gamma-2 yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 35.541 35.933 3 0.0058971 39930 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 50.292 38.079 45042000 0 0 0 0 0 7526500 0 0 0 5457100 5216300 8025100 5994100 4735200 8088000 10744 4839 9792 91315;91316;91317;91318;91319;91320;91321 73000;73001 73000 2 EDWNEIDPIK Unmodified 1257.5877 0.58773217 2177 Q10471 GALNT2 Polypeptide N-acetylgalactosaminyltransferase 2;Polypeptide N-acetylgalactosaminyltransferase 2 soluble form yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 74.297 73.861 2 0.011327 85285 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 54.436 42.211 102730000 0 64321000 0 0 1798800 7761400 0 1752400 0 0 4593200 5692600 3969300 4059600 8777200 10745 2177 9793 91322;91323;91324;91325;91326;91327;91328;91329;91330 73002;73003 73002 2 EDWNVRITK Unmodified 1159.5986 0.59857163 1977 P78347 GTF2I General transcription factor II-I yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 1 2 52.641 47.324 2;3 0.017071 64800 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.066 39.387 73959000 15912000 0 58046000 0 0 0 0 0 0 0 0 0 0 0 0 10746 1977 9794 91331;91332;91333 73004;73005 73004 2 EDYSEIIGSMGEALEEELDSMAK Unmodified 2545.1088 0.10876627 2601 Q16342 PDCD2 Programmed cell death protein 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 103.86 96.859 2;3 2.6354E-14 122841 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.932 82.834 19837000 16354000 3483800 0 0 0 0 0 0 0 0 0 0 0 0 0 10747 2601 9795 91334;91335;91336 73006;73007;73008;73009;73010 73008 5 EDYSFTAYATISYLK Unmodified 1770.8352 0.83523267 1496 P46063 RECQL ATP-dependent DNA helicase Q1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 91.434 87.099 2 0.00015539 90336 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 96.64 90.915 29289000 25529000 1669300 2091000 0 0 0 0 0 0 0 0 0 0 0 0 10748 1496 9796 91337;91338;91339;91340;91341 73011;73012;73013;73014;73015;73016 73012 6 EEAAEYAK Unmodified 909.40798 0.40797689 1909 P62753 RPS6 40S ribosomal protein S6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.28 3.25 1 1 2 14 1 3 2 1 1 2 1 1 1 1 1 1 1 1 10.415 9.8811 2 0.0052431 8787 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 107.59 47.984 225190000 678280 32422000 0 13814000 11374000 19515000 14428000 12135000 14924000 9953400 21210000 21691000 20785000 14119000 18145000 10749 1909 9797 91342;91343;91344;91345;91346;91347;91348;91349;91350;91351;91352;91353;91354;91355;91356;91357;91358;91359 73017;73018;73019;73020;73021;73022;73023;73024;73025;73026;73027;73028 73028 11 EEAAGDGPVSEKPPAESVGNGGSK Unmodified 2268.0506 0.050598185 2879 Q6GQQ9 OTUD7B OTU domain-containing protein 7B yes yes 0 0 1 By MS/MS By matching By matching By matching By matching By MS/MS By matching 8.86 2.8 1 6 1 1 1 1 1 1 1 34.54 34.534 3 1.2624E-22 43137 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.417 59.062 23074000 0 0 0 2461900 1211700 0 1856100 2628700 0 3858300 11057000 0 0 0 0 10750 2879 9798 91360;91361;91362;91363;91364;91365;91366 73029;73030 73030 2 EEAASEPPAAAPDAAPPPPDRPIEK Unmodified 2522.2289 0.2288969 266 O15234 CASC3 Protein CASC3 yes yes 0 0 1 By MS/MS 2 0 1 1 55.063 49.257 3 0.0037653 63674 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 41.446 33.548 12721000 0 12721000 0 0 0 0 0 0 0 0 0 0 0 0 0 10751 266 9799 91367 73031 73031 0 EEAATGGGSTGEADGK Unmodified 1435.6063 0.60629536 308 O43242 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.65 3.66 1 3 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 12.756 12.427 2 3.2051E-60 4760 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 177.1 153.73 443490000 140720000 25844000 2713100 16514000 23041000 31028000 8627600 7967300 9714400 38072000 61416000 36610000 6507900 11992000 22724000 10752 308 9800 91368;91369;91370;91371;91372;91373;91374;91375;91376;91377;91378;91379;91380;91381;91382;91383;91384 73032;73033;73034;73035;73036;73037;73038;73039;73040;73041;73042;73043;73044;73045;73046;73047;73048 73033 17 EEADLLLEQQR Unmodified 1342.6729 0.67285879 378;396 O43896;O60333 KIF1C;KIF1B Kinesin-like protein KIF1C;Kinesin-like protein KIF1B no no 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By matching 10 0 8 1 1 1 1 1 1 1 1 59.106 59.255 2 0.0037353 67198 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 63.184 37.376 49062000 0 0 0 0 2705300 7521900 0 0 6669900 5566800 5734900 0 7338000 3506300 10018000 10753 378;396 9801 91385;91386;91387;91388;91389;91390;91391;91392 73049 73049 1 EEADQPPSCGPEDDAQLQLALSLSREEHDK Unmodified 3363.5161 0.51610673 5284 Q9Y6I3 EPN1 Epsin-1 yes yes 0 0 1 By MS/MS 2 0 1 1 84.765 76.634 4 0.013119 100114 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 30.104 24.201 16899000 16899000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10754 5284 9802 91393 73050 73050 0 EEAEADDGGQGEDK Unmodified 1448.5539 0.55392544 4641 Q9NU22 MDN1 Midasin yes yes 0 0 0 By MS/MS 1 0 1 1 6.6574 23.802 2 0.0085832 4473 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 57.348 57.348 1509200 0 1509200 0 0 0 0 0 0 0 0 0 0 0 0 0 10755 4641 9803 91394 73051 73051 1 EEAEALYHSK Unmodified 1175.5459 0.54586736 79 CON__P35908v2;P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.48 3.09 7 2 37 3 4 2 3 2 4 2 2 3 4 3 2 4 4 4 21.663 21.252 1;2;3 4.4791E-07 22204 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 145.72 145.72 + 23515000000 19421000 1067600000 28588000 3031400000 1130600000 2179400000 1418900000 1436200000 1235300000 2173900000 2057400000 1767600000 3543900000 1314700000 1110100000 10756 79 9804 91395;91396;91397;91398;91399;91400;91401;91402;91403;91404;91405;91406;91407;91408;91409;91410;91411;91412;91413;91414;91415;91416;91417;91418;91419;91420;91421;91422;91423;91424;91425;91426;91427;91428;91429;91430;91431;91432;91433;91434;91435;91436;91437;91438;91439;91440 73052;73053;73054;73055;73056;73057;73058;73059;73060;73061;73062;73063;73064;73065;73066;73067;73068;73069;73070;73071;73072;73073;73074;73075;73076;73077;73078;73079;73080;73081;73082;73083 73083 28 EEAEAMNNLKPPQAK Unmodified 1668.8141 0.81412007 4185 Q9BVC5 C2orf49 Ashwin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 2 1 1 1 1 1 1 1 1 1 1 42.981 42.672 3 0.0036014 47848 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 42.317 29.934 87651000 0 4837500 0 8951500 5655500 5577800 6645400 5689700 6419800 9120300 9024100 10204000 6804700 8720200 0 10757 4185 9805 91441;91442;91443;91444;91445;91446;91447;91448;91449;91450;91451;91452;91453 73084;73085;73086;73087;73088;73089;73090;73091;73092 73084 7 EEAEAMNNLKPPQAK Oxidation (M) 1684.809 0.80903469 4185 Q9BVC5 C2orf49 Ashwin yes yes 0 1 1 By MS/MS 3 0 1 1 31.68 27.239 3 0.0018955 34134 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 59.185 52.747 5085800 0 5085800 0 0 0 0 0 0 0 0 0 0 0 0 0 10758 4185 9805 91454 73093 73093 5671 1 EEAEAPVEDGSQPPPPEPK Unmodified 2001.9167 0.91673047 5206 Q9Y4L1 HYOU1 Hypoxia up-regulated protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.57 1.92 1 20 1 1 2 2 2 1 2 2 2 2 2 2 44.495 45.015 2;3 8.5757E-31 46107 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 106.17 97.445 167870000 24457000 0 0 0 2287400 14197000 9021400 9051800 2469100 13227000 18505000 20648000 10759000 12333000 30913000 10759 5206 9806 91455;91456;91457;91458;91459;91460;91461;91462;91463;91464;91465;91466;91467;91468;91469;91470;91471;91472;91473;91474;91475 73094;73095;73096;73097;73098;73099;73100;73101;73102;73103;73104 73104 10 EEAEEALK Unmodified 917.43419 0.43419164 4230 Q9BXP5 SRRT Serrate RNA effector molecule homolog yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 16.125 16.39 2 0.0051142 14964 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 108.09 76.798 55339000 0 0 0 0 0 0 5096800 0 6563400 6313400 7048300 0 8970800 9852100 11494000 10760 4230 9807 91476;91477;91478;91479;91480;91481;91482 73105;73106;73107;73108;73109 73108 2 EEAEKPEREAK Unmodified 1314.6416 0.64155866 996 P14314 PRKCSH Glucosidase 2 subunit beta yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 6.71 3.81 4 2 8 2 3 1 1 1 1 1 1 1 1 1 5.6592 4.3518 2;3 1.3651E-81 5396 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 240.38 204.93 972070000 44783000 381960000 494300000 4545200 3862600 3695600 0 3888300 5205400 0 7562200 5629200 0 0 16644000 10761 996 9808 91483;91484;91485;91486;91487;91488;91489;91490;91491;91492;91493;91494;91495;91496 73110;73111;73112;73113;73114;73115;73116 73115 5 EEAENQEEKPEK Unmodified 1458.6474 0.6474319 2201 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 6.0356 5.6647 3 1.5889E-05 3760 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 76.522 60.767 104720000 0 33489000 0 6341200 4680200 5246900 5721700 4308100 4897400 6821400 6784000 6805200 6733700 5123700 7769100 10762 2201 9809 91497;91498;91499;91500;91501;91502;91503;91504;91505;91506;91507;91508;91509;91510 73117;73118;73119;73120;73121;73122;73123;73124;73125;73126;73127;73128;73129;73130;73131;73132 73122 16 EEAENTLQSFR Unmodified 1322.6103 0.61025853 870 P08670 VIM Vimentin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.329 48.49 2 4.9973E-90 53664 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 209.21 169.21 747860000 0 0 0 54783000 36865000 66391000 62023000 45330000 29968000 46240000 69075000 82684000 74266000 59978000 120260000 10763 870 9810 91511;91512;91513;91514;91515;91516;91517;91518;91519;91520;91521;91522 73133;73134;73135;73136;73137;73138;73139;73140;73141;73142;73143;73144 73140 11 EEAENTLQSFRQDVDNASLAR Unmodified 2392.1255 0.12549446 870 P08670 VIM Vimentin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 76.959 77.106 3 1.1259E-123 88597 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 188.38 179.28 105990000 0 0 0 0 0 6700400 0 0 0 21787000 20650000 0 0 0 56849000 10764 870 9811 91523;91524;91525;91526 73145;73146;73147;73148 73147 4 EEAERLEK Unmodified 1002.4982 0.49818889 1345 P35241 RDX Radixin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 2 3 1 9.8678 6.5736 2 0.017864 10901 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 134.08 26.766 650410000 63352000 573190000 13874000 0 0 0 0 0 0 0 0 0 0 0 0 10765 1345 9812 91527;91528;91529;91530;91531;91532 73149;73150;73151;73152 73151 0 EEAEVKPEVK Unmodified 1156.5976 0.59756858 547 O75822 EIF3J Eukaryotic translation initiation factor 3 subunit J yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.12 3.26 2 2 12 3 1 1 1 1 1 1 1 1 1 1 1 1 1 17.539 16.807 2;3 1.6272E-15 20784 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 173.37 103.77 438390000 0 319360000 1329600 3519100 3663900 8437600 4613900 5099100 5241100 7941200 14537000 16649000 7555200 10742000 29694000 10766 547 9813 91533;91534;91535;91536;91537;91538;91539;91540;91541;91542;91543;91544;91545;91546;91547;91548 73153;73154;73155;73156 73155 2 EEAGETSPADESGAPK Unmodified 1573.6744 0.67437493 4979 Q9UKY1 ZHX1 Zinc fingers and homeoboxes protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.601 18.799 2 0.00060218 19111 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 65.395 59.292 98610000 0 0 0 6707400 9103000 10241000 7001800 6513600 6677200 12046000 8797700 5524800 10038000 5664600 10295000 10767 4979 9814 91549;91550;91551;91552;91553;91554;91555;91556;91557;91558;91559;91560 73157;73158;73159;73160;73161;73162;73163;73164;73165;73166;73167 73158 11 EEAGGGISEEEAAQYDR Unmodified 1809.7653 0.7653152 4838 Q9UBE0 SAE1 SUMO-activating enzyme subunit 1;SUMO-activating enzyme subunit 1, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 43.749 44.399 2 7.9239E-42 49308 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 180.28 164.74 67338000 0 0 0 0 0 0 0 0 0 0 16280000 14304000 0 0 36754000 10768 4838 9815 91561;91562;91563;91564;91565 73168;73169;73170;73171;73172 73172 5 EEAGGGISEEEAAQYDRQIRLWGLEAQK Unmodified 3132.5112 0.51121977 4838 Q9UBE0 SAE1 SUMO-activating enzyme subunit 1;SUMO-activating enzyme subunit 1, N-terminally processed yes yes 0 0 2 By MS/MS 2 0 1 1 86.968 78.838 4 3.0079E-07 102767 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.475 44.266 15282000 15282000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10769 4838 9816 91566 73173 73173 1 EEAGKEEPPPLTPPAR Unmodified 1716.8683 0.86826413 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 43.394 43.558 3 2.9445E-05 47811 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.288 42.127 14686000 0 0 0 0 0 0 0 0 0 14686000 0 0 0 0 0 10770 4285 9817 91567;91568;91569;91570 73174;73175;73176;73177;73178 73176 5 EEAGPEVDPEEEEEEPQPLPHGR Unmodified 2598.1358 0.13578438 609 O94953 KDM4B Lysine-specific demethylase 4B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 55.437 55.599 3 5.7175E-07 62481 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.876 49.988 26893000 0 0 0 3637600 0 4579200 0 0 0 3493500 0 6240200 0 3514700 5427300 10771 609 9818 91571;91572;91573;91574;91575;91576 73179;73180;73181 73181 3 EEAIEHNYGGHDDDLSVR Unmodified 2054.893 0.89297533 3702 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.07 40.248 4 0.00013771 44806 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 58.693 55.304 367810000 0 0 0 19250000 8490000 33150000 17151000 19026000 9913400 37006000 42574000 62264000 26592000 35757000 56641000 10772 3702 9819 91577;91578;91579;91580;91581;91582;91583;91584;91585;91586;91587;91588 73182;73183;73184;73185;73186;73187;73188;73189;73190;73191 73189 10 EEAIQNFK Unmodified 977.48181 0.48181054 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 32.802 33.027 2 0.024817 35551 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 59.205 35.233 31312000 0 0 0 0 3602400 0 4291900 0 0 0 6941600 10603000 0 5873300 0 10773 213 9820 91589;91590;91591;91592;91593 73192;73193;73194 73194 3 EEALELINGYIQK Unmodified 1518.793 0.79297392 2309 Q13526 PIN1 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.57 3.85 3 1 3 1 2 1 1 2 87.282 84.236 2;3 1.7123E-54 105094 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 200.56 181.21 333080000 12574000 304700000 4799300 0 0 0 0 0 0 0 3646400 0 0 0 7359800 10774 2309 9821 91594;91595;91596;91597;91598;91599;91600 73195;73196;73197;73198;73199;73200;73201 73195 4 EEAPASPLRPLYPQISPLK Unmodified 2105.1521 0.15209055 2019 P85037 FOXK1 Forkhead box protein K1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.801 81.862 3 6.0037E-06 94666 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 69.148 63.938 154500000 0 0 0 1504100 5966500 12985000 6413900 15152000 9130000 17537000 10343000 14546000 7741200 14138000 39038000 10775 2019 9822 91601;91602;91603;91604;91605;91606;91607;91608;91609;91610;91611;91612 73202;73203;73204;73205;73206;73207;73208;73209;73210;73211;73212;73213 73203 12 EEAPDILCLQETK Unmodified 1544.7392 0.73922379 1222 P27695 APEX1 DNA-(apurinic or apyrimidinic site) lyase;DNA-(apurinic or apyrimidinic site) lyase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.12 3.89 3 1 4 1 2 1 1 1 1 1 75.94 73.652 2 5.0541E-08 85010 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 103.08 94.079 2333600000 76836000 2199500000 2042600 0 0 0 0 0 0 0 13159000 0 5703600 8955500 27391000 10776 1222 9823 91613;91614;91615;91616;91617;91618;91619;91620 73214;73215;73216;73217;73218;73219;73220;73221;73222 73216 9 EEAPVQPILSSVPTTEVSTGVK Unmodified 2267.1897 0.18965785 4259 Q9BZ95 WHSC1L1 Histone-lysine N-methyltransferase NSD3 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 16 2 2 2 2 2 2 1 2 1 82.314 82.393 2;3 1.4372E-05 94555 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 50.226 35.916 46800000 0 0 0 0 3758800 4490400 5810600 4218200 0 7344600 5151500 4083800 5548400 6393200 0 10777 4259 9824 91621;91622;91623;91624;91625;91626;91627;91628;91629;91630;91631;91632;91633;91634;91635;91636 73223;73224;73225;73226 73225 3 EEAQAEIEQYR Unmodified 1364.6208 0.62082322 483 O75348 ATP6V1G1 V-type proton ATPase subunit G 1 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 41.952 42.059 2 0.020181 47428 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 52.49 38.898 17538000 0 0 0 2214500 0 0 0 0 0 0 0 0 0 0 15324000 10778 483 9825 91637;91638 73227 73227 1 EEAQAEIEQYRLQREK Unmodified 2019.0021 0.0021318501 483 O75348 ATP6V1G1 V-type proton ATPase subunit G 1 yes yes 0 0 2 By MS/MS By matching 2 0 2 1 1 52.027 46.037 3 0.016583 62963 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.875 65.621 11805000 8906500 0 2898500 0 0 0 0 0 0 0 0 0 0 0 0 10779 483 9826 91639;91640 73228 73228 1 EEAQALEDLTGFK Unmodified 1449.6987 0.69873919 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.567 79.625 2 5.828E-08 92122 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 123.79 107.12 103660000 0 0 0 4037800 7434200 7960900 5439000 5866100 5476900 10053000 11667000 12362000 6502600 9410000 17447000 10780 1492 9827 91641;91642;91643;91644;91645;91646;91647;91648;91649;91650;91651;91652 73229;73230;73231;73232;73233;73234;73235;73236;73237;73238 73237 3 EEAQHFIK Unmodified 1000.4978 0.49779495 3931 Q96N21 ENTHD2 AP-4 complex accessory subunit tepsin yes yes 0 0 0 By matching By MS/MS By matching 10 0 3 1 1 1 21.575 21.69 2 0.038617 22774 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 50.966 25.027 13941000 0 0 0 0 3251300 0 3728600 0 0 0 0 6961400 0 0 0 10781 3931 9828 91653;91654;91655 73239 73239 1 EEAQPIVTK Unmodified 1013.5393 0.53932542 2645 Q1KMD3 HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.602 21.807 2 0.0031256 22137 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 91.069 68.577 1316600000 0 0 0 65844000 69041000 81788000 63833000 88311000 58207000 117930000 142790000 191570000 200450000 110220000 126590000 10782 2645 9829 91656;91657;91658;91659;91660;91661;91662;91663;91664;91665;91666;91667 73240;73241;73242;73243;73244;73245;73246;73247;73248;73249;73250;73251;73252 73246 11 EEAQSLEDLAGFK Unmodified 1435.6831 0.68308912 1492 P46013 MKI67 Antigen KI-67 yes no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.53 2.94 1 2 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 77.685 76.945 2 3.508E-18 94441 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 158.79 148.03 432070000 494570 237830000 0 6534600 10986000 12078000 11224000 14665000 10623000 20223000 19713000 22740000 12833000 11081000 41050000 10783 1492 9830 91668;91669;91670;91671;91672;91673;91674;91675;91676;91677;91678;91679;91680;91681;91682 73253;73254;73255;73256;73257;73258;73259;73260;73261;73262;73263;73264;73265;73266 73256 13 EEAQTSGVQEAETR Unmodified 1533.6907 0.6906937 3321 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 20.154 20.36 2 0.0004006 19904 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.288 79.253 63435000 0 0 0 1759800 1890200 0 3367400 2276600 0 11111000 13945000 6787000 0 0 22298000 10784 3321 9831 91683;91684;91685;91686;91687;91688;91689;91690;91691 73267;73268;73269;73270;73271;73272;73273 73269 7 EEAQTSGVQEAETRVGSALK Unmodified 2089.0287 0.028740531 3321 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 68.133 62.234 3 2.5705E-08 79456 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.511 69.949 14810000 0 14810000 0 0 0 0 0 0 0 0 0 0 0 0 0 10785 3321 9832 91692 73274 73274 1 EEAQVTPDSDK Unmodified 1217.5412 0.54117591 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 7.88 3.69 1 1 6 2 1 1 1 1 1 1 13.164 12.741 2 0.00054886 12354 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 98.044 88.456 47502000 8889100 0 0 0 1607100 6088900 0 0 0 8554800 6131000 0 0 5086200 11145000 10786 487 9833 91693;91694;91695;91696;91697;91698;91699;91700 73275;73276;73277;73278;73279 73275 5 EEASDLLLNK Unmodified 1130.5819 0.58191851 2215 Q12965 MYO1E Unconventional myosin-Ie yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 54.467 54.555 2 0.0051146 61845 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 70.256 26.277 62529000 0 0 0 6167100 4953200 5007900 5501400 4152600 3535300 6309500 8261900 6702400 6782900 5155200 0 10787 2215 9834 91701;91702;91703;91704;91705;91706;91707;91708;91709;91710;91711 73280;73281;73282;73283;73284;73285;73286;73287 73280 8 EEASDYLELDTIK Unmodified 1524.7195 0.71953421 1002 P14625 HSP90B1 Endoplasmin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.77 3.9 1 6 2 13 2 5 2 2 1 1 1 1 1 1 1 1 1 1 1 77.546 75.913 2;3 1.159E-11 87884 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 121.9 115.73 6077300000 577580000 3777600000 17927000 62584000 69117000 157660000 85512000 90475000 79426000 166260000 183280000 166390000 121140000 144180000 378200000 10788 1002 9835 91712;91713;91714;91715;91716;91717;91718;91719;91720;91721;91722;91723;91724;91725;91726;91727;91728;91729;91730;91731;91732;91733 73288;73289;73290;73291;73292;73293;73294;73295;73296;73297;73298;73299;73300;73301;73302;73303;73304;73305;73306;73307 73295 18 EEASGSSVTAEEAK Unmodified 1393.6209 0.6208828 974 P13010 XRCC5 X-ray repair cross-complementing protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.53 3.84 2 3 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 21.501 21.32 2;3 7.3635E-23 14323 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 184.36 177.42 1132700000 114760000 72745000 3554700 29930000 25577000 47553000 46518000 21248000 33541000 62484000 114150000 103450000 88999000 127590000 240640000 10789 974 9836 91734;91735;91736;91737;91738;91739;91740;91741;91742;91743;91744;91745;91746;91747;91748;91749;91750 73308;73309;73310;73311;73312;73313;73314;73315;73316;73317;73318;73319;73320;73321;73322;73323;73324;73325;73326;73327 73313 20 EEASGSSVTAEEAKK Unmodified 1521.7158 0.71584581 974 P13010 XRCC5 X-ray repair cross-complementing protein 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.56 3 2 1 13 1 2 2 1 1 1 2 2 2 2 12.588 12.027 2;3 3.4319E-23 10537 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 118.13 114.89 635080000 27969000 484520000 0 14808000 1685100 2042900 3035200 0 0 0 0 32664000 15443000 18753000 34168000 10790 974 9837 91751;91752;91753;91754;91755;91756;91757;91758;91759;91760;91761;91762;91763;91764;91765;91766 73328;73329;73330;73331;73332;73333;73334;73335;73336;73337 73330 10 EEASHLGFSATDK Unmodified 1390.6365 0.63647328 313 O43298 ZBTB43 Zinc finger and BTB domain-containing protein 43 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 35.437 34.739 3 0.023066 45314 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 30.874 23.418 91056000 0 16948000 0 5361100 6175300 9508400 4569600 0 5081900 6295700 10675000 0 8217300 7289000 10935000 10791 313 9838 91767;91768;91769;91770;91771;91772;91773;91774;91775;91776;91777;91778 73338;73339;73340;73341 73339 4 EEASPVPLTSNVGSTVK Unmodified 1713.8785 0.87849447 5023 Q9UMZ2 SYNRG Synergin gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.905 63 2 4.6897E-37 71921 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 134.56 108.52 98523000 0 0 0 4011600 5768200 5841200 6897200 5349900 5312200 12314000 8733800 12536000 8555500 8311700 14892000 10792 5023 9839 91779;91780;91781;91782;91783;91784;91785;91786;91787;91788;91789;91790 73342;73343;73344;73345;73346;73347;73348;73349;73350;73351;73352;73353;73354;73355 73353 14 EEASTSLPTKPTQGASSASEPQEAPPKPAEDK Unmodified 3264.5634 0.5633745 711 O96005 CLPTM1 Cleft lip and palate transmembrane protein 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 42.668 42.714 4 3.656E-12 48169 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 42.347 37.994 20313000 0 0 0 0 3485400 0 4385300 5172400 0 0 7269600 0 0 0 0 10793 711 9840 91791;91792;91793;91794 73356;73357 73357 2 EEATKEEEAIK Unmodified 1275.6194 0.61942623 3308 Q8N163 CCAR2 Cell cycle and apoptosis regulator protein 2 yes yes 0 0 1 By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching 8.53 2.94 1 2 12 3 1 1 1 1 1 1 1 1 1 1 1 1 15.122 14.536 2;3 0.00045034 17627 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 97.734 70.253 116270000 0 29024000 0 5321100 8240300 4040800 4963200 7264000 2141600 9120400 9340900 9509400 8162500 9091800 10045000 10794 3308 9841 91795;91796;91797;91798;91799;91800;91801;91802;91803;91804;91805;91806;91807;91808;91809 73358;73359;73360;73361;73362;73363 73360 2 EEAWVIGSVVAR Unmodified 1314.6932 0.6932003 1134 P22102 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 80.304 80.502 2 0.001364 92684 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.49 60.335 15784000 0 0 0 0 0 0 861620 0 0 0 3695700 0 0 0 11227000 10795 1134 9842 91810;91811;91812 73364;73365 73364 2 EEAYEFVR Unmodified 1041.4767 0.47672516 2895 Q6N069 NAA16 N-alpha-acetyltransferase 16, NatA auxiliary subunit yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 49.106 49.278 2 0.0044102 55025 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 112.17 93.441 132260000 0 0 0 0 11745000 6815700 0 0 0 19582000 36117000 57998000 0 0 0 10796 2895 9843 91813;91814;91815;91816;91817;91818 73366;73367;73368;73369;73370 73368 5 EEAYEFVRK Unmodified 1169.5717 0.57168818 2895 Q6N069 NAA16 N-alpha-acetyltransferase 16, NatA auxiliary subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 2 2 2 2 2 2 2 2 36.833 36.955 2;3 0.019472 40692 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 39.547 27.333 281560000 0 0 0 6197600 15736000 12092000 20437000 25261000 26407000 43516000 51465000 80450000 0 0 0 10797 2895 9844 91819;91820;91821;91822;91823;91824;91825;91826;91827;91828;91829;91830;91831;91832;91833;91834;91835 73371;73372;73373;73374;73375;73376 73373 5 EEAYELVR Unmodified 1007.4924 0.49237523 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 44.476 44.733 2 3.6798E-07 50792 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 158.36 102.92 826940000 0 0 0 0 0 6750500 87095000 111100000 87696000 170530000 179370000 184400000 0 0 0 10798 4226 9845 91836;91837;91838;91839;91840;91841;91842 73377;73378;73379;73380;73381;73382;73383;73384;73385;73386;73387;73388;73389;73390;73391 73381 15 EEAYELVRR Unmodified 1163.5935 0.59348625 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 0 1 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 2 37.34 37.563 2;3 0.0013029 41336 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 87.308 65.844 408710000 0 0 0 0 1305400 2027000 19854000 29451000 26961000 58271000 95618000 175220000 0 0 0 10799 4226 9846 91843;91844;91845;91846;91847;91848;91849;91850;91851 73392;73393;73394;73395;73396;73397;73398 73392 6 EEAYNSLMK Oxidation (M) 1099.4856 0.48557529 1464 P42704 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.8 3.37 1 2 7 1 2 1 1 1 1 1 1 1 25.626 24.394 2 0.0065565 25308 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.246 39.352 50845000 255360 26351000 0 0 0 3108800 0 0 0 4151500 3118000 5024800 3779400 0 5055400 10800 1464 9847 91852;91853;91854;91855;91856;91857;91858;91859;91860;91861 73399;73400;73401;73402;73403;73404;73405;73406 73405 2297 8 EEAYNSLMK Unmodified 1083.4907 0.49066067 1464 P42704 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 45.58 40.259 2 0.007262 52204 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.429 72.804 99171000 0 99171000 0 0 0 0 0 0 0 0 0 0 0 0 0 10801 1464 9847 91862 73407 73407 1 EECFRSGVAEAPVGSK Unmodified 1721.8043 0.80428367 4326 Q9H0E9 BRD8 Bromodomain-containing protein 8 yes yes 0 0 1 By MS/MS 2 0 1 1 45.433 40.112 3 0.024382 52286 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 43.454 31.98 22184000 0 22184000 0 0 0 0 0 0 0 0 0 0 0 0 0 10802 4326 9848 91863 73408 73408 0 EECPAVRLITLEEEMTK Unmodified 2046.9966 0.99657747 838 P07237 P4HB Protein disulfide-isomerase yes yes 0 0 1 By MS/MS By MS/MS 2 0 4 2 2 94.476 88.001 3;4 0.0002769 112158 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.349 77.054 178200000 58278000 119920000 0 0 0 0 0 0 0 0 0 0 0 0 0 10803 838 9849 91864;91865;91866;91867 73409;73410;73411;73412;73413 73412 4 EECPAVRLITLEEEMTK Oxidation (M) 2062.9915 0.99149209 838 P07237 P4HB Protein disulfide-isomerase yes yes 0 1 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 84.089 80.593 3 1.7902E-13 97670 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 111.33 106.97 69113000 0 23767000 45346000 0 0 0 0 0 0 0 0 0 0 0 0 10804 838 9849 91868;91869;91870 73414;73415;73416 73416 1024 3 EEDACHLIIPLREVTIVEK Unmodified 2263.1882 0.18821806 2843 Q66K14 TBC1D9B TBC1 domain family member 9B yes yes 0 0 1 By MS/MS 2 0 1 1 90.438 82.307 4 0.0056684 106911 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 39.385 32.397 8592700 8592700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10805 2843 9850 91871 73417 73417 1 EEDAFYSK Unmodified 987.41854 0.41854158 4978 Q9UKX7 NUP50 Nuclear pore complex protein Nup50 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching 10 0 5 1 1 1 1 1 26.16 26.173 2 0.043878 28344 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 49.097 26.077 22003000 0 0 0 3095900 2965000 0 0 3518600 3738300 0 0 0 8684900 0 0 10806 4978 9851 91872;91873;91874;91875;91876 73418 73418 1 EEDCHSPTSKPPKPDQPLK Unmodified 2189.0423 0.042282105 1166 P23588 EIF4B Eukaryotic translation initiation factor 4B yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.71 5 11 2 1 2 1 1 1 1 2 2 1 2 25.012 23.903 3;4;5 3.6002E-07 23985 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.504 50.536 686560000 140210000 16812000 299160000 0 15943000 0 954530 0 1302300 2323200 43087000 45547000 0 3344100 117880000 10807 1166 9852 91877;91878;91879;91880;91881;91882;91883;91884;91885;91886;91887;91888;91889;91890;91891;91892 73419;73420;73421;73422;73423;73424;73425 73419 4 EEDDDTERLPSK Unmodified 1432.6318 0.63178183 3306 Q8N129 CNPY4 Protein canopy homolog 4 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 22.768 18.546 3 0.00018615 24596 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.336 60.813 92380000 33630000 58750000 0 0 0 0 0 0 0 0 0 0 0 0 0 10808 3306 9853 91893;91894;91895 73426;73427;73428 73427 3 EEDDNEK Unmodified 877.33012 0.3301205 4980 Q9UKY7 CDV3 Protein CDV3 homolog yes yes 0 0 0 By MS/MS 1 0 1 1 106.49 111.75 2 0.013291 92426 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 122.79 64.596 22667000 22667000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10809 4980 9854 91896 73429 73429 1 EEDEEEDVPGQAK Unmodified 1473.6107 0.61071204 1225 P27797 CALR Calreticulin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.521 22.726 2 8.469E-33 23390 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 204.52 201.38 275780000 0 0 0 8183100 5303500 21734000 8799800 7788400 25576000 14271000 34835000 22138000 23953000 41092000 62105000 10810 1225 9855 91897;91898;91899;91900;91901;91902;91903;91904;91905;91906;91907;91908 73430;73431;73432;73433;73434;73435;73436;73437;73438;73439;73440;73441 73439 11 EEDEEGEDVVTSTGR Unmodified 1650.6857 0.6856679 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.444 32.632 2 4.4651E-23 35475 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 150.06 145.76 78855000 0 0 0 3967900 4837700 8128800 7001700 4401300 5461600 6134700 5762100 9083300 6115000 6152200 11808000 10811 3443 9856 91909;91910;91911;91912;91913;91914;91915;91916;91917;91918;91919;91920 73442;73443;73444;73445;73446;73447;73448;73449;73450;73451;73452;73453 73447 12 EEDEEPESPPEK Unmodified 1413.5783 0.57834928 4349 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.796 18.993 2 0.00099449 17954 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 75.378 75.378 34454000 0 0 0 2007500 1127700 2639600 1735200 2620600 3984100 3562100 3122600 2763900 2853500 2235200 5802100 10812 4349 9857 91921;91922;91923;91924;91925;91926;91927;91928;91929;91930;91931;91932 73454;73455;73456;73457 73456 4 EEDEQEDLTK Unmodified 1234.5201 0.52010612 3687 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 16.741 16.955 2 0.0025724 16845 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 96.948 50.151 71488000 0 0 0 0 0 16920000 0 0 8939700 13924000 0 0 0 14692000 17013000 10813 3687 9858 91933;91934;91935;91936;91937 73458;73459;73460;73461;73462 73459 3 EEDFFLEK Unmodified 1055.4811 0.48114184 3236 Q8IW75 SERPINA12 Serpin A12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 65.896 65.845 2 0.019608 75317 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 63.48 17.762 34982000 0 0 0 8891600 2151800 4333100 2947600 8085800 1827000 0 0 0 3688300 3056500 0 10814 3236 9859 91938;91939;91940;91941;91942;91943;91944;91945 73463;73464;73465;73466;73467 73465 5 EEDFHPELESLDGDLDPGLPSTEDVILK Unmodified 3108.4663 0.46628622 5126 Q9Y2X7 GIT1 ARF GTPase-activating protein GIT1 yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 95.038 89.353 3 0.00010898 113378 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 38.146 32.527 17064000 14501000 2563100 0 0 0 0 0 0 0 0 0 0 0 0 0 10815 5126 9860 91946;91947 73468;73469 73469 2 EEDGEEIVTYDHLCK Unmodified 1835.7884 0.78835883 3544 Q8WUH1 CHURC1 Protein Churchill yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 62.726 56.407 3 0.00022376 73066 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.925 72.825 49416000 10075000 39342000 0 0 0 0 0 0 0 0 0 0 0 0 0 10816 3544 9861 91948;91949;91950 73470;73471;73472;73473;73474;73475 73471 6 EEDGSLSLDGADSTGVVAK Unmodified 1848.8589 0.85888124 2262 Q13263 TRIM28 Transcription intermediary factor 1-beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.84 1 4 31 1 3 1 2 3 3 2 2 2 4 3 2 3 2 3 62.263 61.692 2;3 2.1184E-159 69688 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 210.91 200.85 1544400000 46303000 119510000 3451900 57689000 66346000 112950000 86281000 74304000 60238000 133530000 142560000 204570000 118570000 106850000 211200000 10817 2262 9862 91951;91952;91953;91954;91955;91956;91957;91958;91959;91960;91961;91962;91963;91964;91965;91966;91967;91968;91969;91970;91971;91972;91973;91974;91975;91976;91977;91978;91979;91980;91981;91982;91983;91984;91985;91986 73476;73477;73478;73479;73480;73481;73482;73483;73484;73485;73486;73487;73488;73489;73490;73491;73492;73493;73494;73495;73496;73497;73498;73499;73500;73501;73502;73503;73504;73505;73506;73507;73508 73485 33 EEDGSTCLHHAAK Unmodified 1453.6256 0.62559102 3912 Q96KQ7 EHMT2 Histone-lysine N-methyltransferase EHMT2 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 9.2229 6.272 3 0.0040221 8088 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 56.551 52.689 34487000 0 28721000 5766100 0 0 0 0 0 0 0 0 0 0 0 0 10818 3912 9863 91987;91988;91989 73509;73510;73511 73511 3 EEDGSVELESQVQK Unmodified 1575.7264 0.7264105 3748 Q96B23 C18orf25 Uncharacterized protein C18orf25 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 41.838 42.205 2 0.0020418 47074 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 69.672 44.896 8472800 0 0 0 0 0 0 0 0 0 0 4111200 0 0 4361500 0 10819 3748 9864 91990;91991;91992 73512;73513;73514 73513 3 EEDIAVLAEEK Unmodified 1244.6136 0.61361257 3470 Q8TAF3 WDR48 WD repeat-containing protein 48 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.775 60.873 2 0.00025931 69978 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 91.584 65.2 40704000 0 0 0 2182000 1945900 3881900 3273400 0 3889600 3799900 4132500 3373100 4356300 3741000 6128600 10820 3470 9865 91993;91994;91995;91996;91997;91998;91999;92000;92001;92002;92003;92004 73515;73516;73517;73518;73519;73520;73521;73522;73523;73524;73525 73525 11 EEDKEPLIELFVK Unmodified 1587.8396 0.83958976 5270 Q9Y696 CLIC4 Chloride intracellular channel protein 4 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 95.335 88.837 3 0.0012361 112193 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.891 53.112 124200000 99413000 24785000 0 0 0 0 0 0 0 0 0 0 0 0 0 10821 5270 9866 92005;92006 73526;73527 73526 2 EEDLVVWVDPLDGTK Unmodified 1713.8461 0.8461317 701 O95861 BPNT1 3'(2'),5'-bisphosphate nucleotidase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 95.252 90.104 2 2.723E-06 113042 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.82 101.02 34413000 18852000 14754000 806770 0 0 0 0 0 0 0 0 0 0 0 0 10822 701 9867 92007;92008;92009 73528;73529 73528 2 EEDMLELLK Unmodified 1118.5529 0.55292657 1241 P29083 GTF2E1 General transcription factor IIE subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 83.582 82.914 2 0.012914 103104 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.56 55.06 72616000 0 55580000 803350 0 966780 1865600 0 997290 0 2001700 2503100 1906000 2845300 3146200 0 10823 1241 9868 92010;92011;92012;92013;92014;92015;92016;92017;92018;92019 73530;73531;73532 73531 2 EEDPATGTGDPPRK Unmodified 1468.6794 0.67940073 1488 P45974 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.56 1.83 1 17 1 1 1 2 2 1 1 1 2 1 1 2 2 12.888 12.867 2;3 0.00052737 11309 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 56.482 48.757 217790000 0 18017000 0 12583000 5337600 31974000 10359000 7536400 8144300 20497000 13714000 21106000 11020000 15373000 42126000 10824 1488 9869 92020;92021;92022;92023;92024;92025;92026;92027;92028;92029;92030;92031;92032;92033;92034;92035;92036;92037 73533;73534;73535;73536;73537;73538;73539;73540;73541 73538 6 EEDPFNVDSSSLTGPVADTNLDFFQSDPFVGSDPFK Unmodified 3919.7588 0.75883943 1457 P42566 EPS15 Epidermal growth factor receptor substrate 15 yes yes 0 0 0 By MS/MS 2 0 1 1 99.368 96.942 3 0.014168 117203 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 18.743 17.081 1123100 0 0 1123100 0 0 0 0 0 0 0 0 0 0 0 0 10825 1457 9870 92038 73542 73542 1 EEDQATLVEQVK Unmodified 1387.6831 0.68308912 3886 Q96IZ7 RSRC1 Serine/Arginine-related protein 53 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 47.885 48.127 2 0.0005662 54188 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 77.662 45.342 82157000 0 0 0 7835000 0 8325100 0 5178500 5544600 7765200 10049000 12301000 9331600 5954000 9872600 10826 3886 9871 92039;92040;92041;92042;92043;92044;92045;92046;92047;92048 73543;73544;73545;73546;73547;73548;73549;73550;73551 73550 9 EEDSANLKPSELK Unmodified 1458.7202 0.72020291 5236 Q9Y5K6 CD2AP CD2-associated protein yes yes 0 0 1 By MS/MS 3 0 1 1 38.074 33.442 3 4.4382E-06 41620 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 93.011 76.873 17583000 0 17583000 0 0 0 0 0 0 0 0 0 0 0 0 0 10827 5236 9872 92049 73552 73552 1 EEDTSGYR Unmodified 955.3883 0.38830408 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 7.4521 7.4747 2 0.02755 5521 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 57.281 48.508 7715700 0 0 0 1564900 0 0 1903500 4247300 0 0 0 0 0 0 0 10828 1029 9873 92050;92051;92052 73553 73553 1 EEDTSGYRAQIDNLTR Unmodified 1866.8708 0.87078333 1029 P15924 DSP Desmoplakin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 55.714 55.672 3 0.0029496 63864 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 41.871 32.939 43240000 0 0 0 8062000 3049000 4359100 3828400 16772000 3201000 0 3968500 0 0 0 0 10829 1029 9874 92053;92054;92055;92056;92057;92058;92059 73554;73555;73556;73557 73557 4 EEDWRNAAQVLVGIPLETGQK Unmodified 2352.2074 0.2073736 4137 Q9BT78 COPS4 COP9 signalosome complex subunit 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 94.926 90.255 3 7.9572E-05 108761 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 64.203 55.494 72789000 25284000 46484000 1021200 0 0 0 0 0 0 0 0 0 0 0 0 10830 4137 9875 92060;92061;92062;92063 73558;73559;73560;73561;73562 73559 5 EEEAIKEEVVK Unmodified 1301.6715 0.6714618 3308 Q8N163 CCAR2 Cell cycle and apoptosis regulator protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.64 2.9 1 1 9 2 1 1 1 1 1 1 1 1 1 32.277 31.516 3 0.0004298 38811 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 83.397 55.219 86398000 0 43168000 0 5215200 3640300 0 5056600 4676600 2162000 5865900 0 0 4366300 4643600 7603900 10831 3308 9876 92064;92065;92066;92067;92068;92069;92070;92071;92072;92073;92074 73563;73564 73564 1 EEEATEWQHK Unmodified 1285.5575 0.55749468 1345 P35241 RDX Radixin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 6 2 2 4 2 22.221 18.354 2;3 4.5515E-76 24271 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 233.21 215.22 322470000 26361000 289240000 6868600 0 0 0 0 0 0 0 0 0 0 0 0 10832 1345 9877 92075;92076;92077;92078;92079;92080;92081;92082 73565;73566;73567;73568;73569;73570 73566 5 EEEDDSALPQEVSIAASRPSR Unmodified 2285.0771 0.077147287 3898 Q96JP5 ZFP91 E3 ubiquitin-protein ligase ZFP91 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.477 64.566 3 1.1566E-06 73180 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.2 59.199 327790000 0 0 0 17853000 14867000 40755000 22378000 15704000 27116000 30258000 30340000 38990000 11711000 29971000 47847000 10833 3898 9878 92083;92084;92085;92086;92087;92088;92089;92090;92091;92092;92093;92094 73571;73572;73573;73574;73575;73576;73577;73578;73579;73580;73581;73582;73583;73584 73574 14 EEEDGQWK Unmodified 1019.4196 0.41960421 1769 P55735 SEC13 Protein SEC13 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 15.98 12.607 2 0.029327 16749 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.847 64.357 8357100 0 8357100 0 0 0 0 0 0 0 0 0 0 0 0 0 10834 1769 9879 92095 73585 73585 1 EEEDGQWKEEQK Unmodified 1533.6583 0.65833093 1769 P55735 SEC13 Protein SEC13 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 3 1 1 1 1 1 1 1 1 1 1 1 16.315 15.422 2;3 1.4344E-14 19386 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.33 85.52 131340000 5789100 35696000 0 3212900 3468100 3746200 4074500 0 3961900 6563700 9885800 11537000 9414100 10802000 23187000 10835 1769 9880 92096;92097;92098;92099;92100;92101;92102;92103;92104;92105;92106;92107;92108;92109;92110 73586;73587;73588;73589;73590;73591;73592;73593;73594;73595;73596;73597 73588 12 EEEDKDDEEKPK Unmodified 1489.642 0.64201217 862 P08238;Q58FF7 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 0 0 2 By MS/MS By MS/MS By MS/MS 2 0 6 3 2 1 4.7116 1.5947 2;3 1.4811E-35 5117 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 212.72 197.57 1464300000 593720000 864180000 6414300 0 0 0 0 0 0 0 0 0 0 0 0 10836 862 9881 92111;92112;92113;92114;92115;92116 73598;73599;73600;73601 73600 2 EEEDVSGEPEASPSADTTILFVK Unmodified 2449.1384 0.13841014 1476 P43307 SSR1 Translocon-associated protein subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 2 2 1 2 81.585 81.644 2;3 4.436E-54 93659 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 138.77 131.4 166890000 0 0 0 7629500 12650000 14543000 10155000 11107000 14515000 17419000 17742000 23835000 12268000 6132100 18897000 10837 1476 9882 92117;92118;92119;92120;92121;92122;92123;92124;92125;92126;92127;92128;92129;92130;92131;92132;92133;92134;92135;92136;92137;92138;92139 73602;73603;73604;73605;73606;73607;73608;73609;73610;73611;73612;73613 73610 10 EEEEAEDKEDDEDK Unmodified 1708.6435 0.64352831 1225 P27797 CALR Calreticulin yes yes 0 0 1 By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 6.3904 6.5481 3 2.3067E-14 3880 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 116.51 111.42 19074000 0 0 0 1252900 0 781280 0 0 1348700 829070 4010500 1506700 1980400 1700200 5664100 10838 1225 9883 92140;92141;92142;92143;92144;92145;92146;92147;92148 73614;73615 73614 2 EEEEATASERNDADEK Unmodified 1821.7501 0.75005907 2773 Q5T3I0 GPATCH4 G patch domain-containing protein 4 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 8.6971 8.7604 3 0.00024661 7125 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 65.092 57.802 15073000 0 0 0 1876400 1098200 1111800 1007200 0 0 0 0 3324400 3902700 0 2752100 10839 2773 9884 92149;92150;92151;92152;92153;92154;92155 73616;73617;73618 73618 3 EEEEDTYEK Unmodified 1170.4564 0.45644323 360 O43719 HTATSF1 HIV Tat-specific factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 10.159 10.366 2 0.0033124 9273 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 93.429 86.604 17329000 0 0 0 0 0 2382300 0 561680 1559700 935310 2872400 0 2329200 2587900 4100600 10840 360 9885 92156;92157;92158;92159;92160;92161;92162;92163 73619;73620;73621;73622;73623 73623 5 EEEEEETPK Unmodified 1118.4615 0.46152861 1081 P18858 LIG1 DNA ligase 1 yes yes 0 0 0 By MS/MS 1 0 1 1 106.68 111.94 2 0.0028279 92688 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 116.73 109.16 21063000 21063000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10841 1081 9886 92164 73624 73624 1 EEEEEVFESSVPQR Unmodified 1692.7479 0.74787422 413 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta yes yes 0 0 0 By matching By MS/MS 10 0 3 1 2 57.234 57.354 2;3 0.0028928 65412 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 83.397 77.856 17571000 0 0 0 0 0 4364400 0 0 0 13207000 0 0 0 0 0 10842 413 9887 92165;92166;92167 73625;73626 73626 1 EEEEEVFESSVPQRSTLAELK Unmodified 2435.1704 0.17037897 413 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta yes yes 0 0 1 By MS/MS 2 0 1 1 80.67 72.54 3 7.7852E-07 95123 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.99 59.847 22042000 22042000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10843 413 9888 92168 73627 73627 1 EEEEEYEEEGEEEGEK Unmodified 1971.7229 0.72290084 2201 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes yes 0 0 0 By MS/MS 10 0 1 1 29.612 29.614 2 9.6912E-19 32208 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 109.24 97.37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10844 2201 9889 92169 73628 73628 1 EEEEFNTGPLSVLTQSVK Unmodified 2005.9844 0.9844161 1894 P62316 SNRPD2 Small nuclear ribonucleoprotein Sm D2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 90.239 90.385 2 5.537E-05 104669 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.362 67.16 9099500 0 0 0 0 0 0 0 0 0 1867700 1831500 1967600 0 0 3432800 10845 1894 9890 92170;92171;92172;92173 73629;73630 73629 2 EEEEPMDTSSVTHTEHYK Oxidation (M) 2163.8903 0.89025772 322 O43390 HNRNPR Heterogeneous nuclear ribonucleoprotein R yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 5 2 2 1 28.813 24.204 3;4 1.7682E-05 33740 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.685 68.717 97411000 37191000 57507000 2713400 0 0 0 0 0 0 0 0 0 0 0 0 10846 322 9891 92174;92175;92176;92177;92178 73631;73632;73633 73633 405 3 EEEEPMDTSSVTHTEHYK Unmodified 2147.8953 0.8953431 322 O43390 HNRNPR Heterogeneous nuclear ribonucleoprotein R yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 6 2 2 2 40.282 35.208 3;4 3.6929E-05 48021 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.441 77.409 133310000 36764000 86355000 10191000 0 0 0 0 0 0 0 0 0 0 0 0 10847 322 9891 92179;92180;92181;92182;92183;92184 73634;73635;73636;73637 73636 4 EEEEQRRAEEQMLK Unmodified 1803.8421 0.84212573 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29.347 28.526 3 0.0043217 29684 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.171 43.641 250480000 24428000 14748000 38731000 0 5506100 11858000 8125700 7422200 5941200 19030000 26131000 21430000 16217000 18261000 32653000 10848 2378 9892 92185;92186;92187;92188;92189;92190;92191;92192;92193;92194;92195;92196;92197;92198 73638;73639;73640;73641;73642 73639 5 EEEEQRRAEEQMLK Oxidation (M) 1819.837 0.83704036 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 1 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 14.77 14.365 3;4 0.0062837 13690 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.659 28.65 123350000 10885000 0 35560000 6008600 3949200 6358500 7264300 4309800 4556300 9462700 7426300 10611000 9960900 6998100 0 10849 2378 9892 92199;92200;92201;92202;92203;92204;92205;92206;92207;92208;92209;92210;92211 73643;73644 73644 3864 1 EEEEVRQQALLAK Unmodified 1541.8049 0.80493559 4021 Q99543 DNAJC2 DnaJ homolog subfamily C member 2;DnaJ homolog subfamily C member 2, N-terminally processed yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 42.618 37.675 3 0.0003143 49132 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.182 49.987 24451000 0 24451000 0 0 0 0 0 0 0 0 0 0 0 0 0 10850 4021 9893 92212;92213 73645;73646 73645 1 EEEFLTNELSRK Unmodified 1493.7362 0.73618733 2598 Q16204 CCDC6 Coiled-coil domain-containing protein 6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.06 3.8 5 1 10 1 3 2 1 1 1 1 1 1 2 1 1 60.134 58.034 2;3 7.3887E-06 75758 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.301 83.685 452700000 37715000 196300000 46614000 10351000 6714600 14742000 11134000 0 0 20676000 26986000 28707000 23102000 0 29653000 10851 2598 9894 92214;92215;92216;92217;92218;92219;92220;92221;92222;92223;92224;92225;92226;92227;92228;92229 73647;73648;73649;73650;73651;73652;73653;73654;73655;73656;73657;73658;73659;73660;73661;73662;73663;73664;73665 73651 17 EEEGGGDGHSEAAEK Unmodified 1500.5965 0.59645896 2905 Q6NXR4 TTI2 TELO2-interacting protein 2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 5.8199 2.5191 3 0.00015526 4561 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.156 57.19 35156000 0 35156000 0 0 0 0 0 0 0 0 0 0 0 0 0 10852 2905 9895 92230;92231 73666;73667 73666 2 EEEGLANGSAAEPAMPNTYGVEPLPQEVLK Oxidation (M) 3155.4969 0.49687484 1590 P49736 MCM2 DNA replication licensing factor MCM2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 83.797 82.638 3 2.3904E-29 95866 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.848 65.353 54290000 0 38399000 0 0 2243200 0 0 2235400 0 0 0 0 0 0 11412000 10853 1590 9896 92232;92233;92234;92235 73668;73669 73669 2558 2 EEEGLANGSAAEPAMPNTYGVEPLPQEVLK Unmodified 3139.502 0.50196022 1590 P49736 MCM2 DNA replication licensing factor MCM2 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 88.278 85.91 3 5.0263E-78 105871 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.82 120.68 62422000 0 53018000 0 0 0 0 0 0 0 0 0 0 0 0 9403700 10854 1590 9896 92236;92237 73670;73671 73670 2 EEEGLANGSAAEPAMPNTYGVEPLPQEVLKK Unmodified 3267.5969 0.59692324 1590 P49736 MCM2 DNA replication licensing factor MCM2 yes yes 0 0 1 By MS/MS 2 0 1 1 86.153 81.379 3 1.4993E-67 101183 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.41 116.25 63011000 0 63011000 0 0 0 0 0 0 0 0 0 0 0 0 0 10855 1590 9897 92238 73672 73672 1 EEEGLECPNSSSEK Acetyl (Protein N-term) 1635.657 0.65701031 3056 Q7L7V1 DHX32 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 yes yes 1 0 0 By MS/MS 1 0 1 1 106.63 107.52 2 0.0026904 99551 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 54.608 35.828 150570000 0 150570000 0 0 0 0 0 0 0 0 0 0 0 0 0 10856 3056 9898 92239 73673 73673 1 EEEGLRAQVRDLEEK Unmodified 1799.9014 0.90135517 2391 Q14203 DCTN1 Dynactin subunit 1 yes yes 0 0 2 By MS/MS 2 0 2 2 56.688 48.507 3;4 0.0071093 66161 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.043 19.763 57172000 57172000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10857 2391 9899 92240;92241 73674;73675 73674 2 EEEGTGVVHQAPYFGAEDYR Unmodified 2252.9974 0.9974404 1441 P41252 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.52 64.609 3 3.7507E-11 73798 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 62.684 60.916 214870000 0 0 0 5756600 7445400 21220000 7662500 12725000 8613900 14415000 21904000 27193000 11539000 20767000 55629000 10858 1441 9900 92242;92243;92244;92245;92246;92247;92248;92249;92250;92251;92252;92253 73676;73677;73678;73679;73680;73681;73682;73683;73684;73685;73686;73687;73688;73689 73676 14 EEEHDCFLEEIMTK Unmodified 1808.7597 0.75970124 964 P12268 IMPDH2 Inosine-5'-monophosphate dehydrogenase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 2 2 1 86.765 81.417 2;3 2.9653E-24 102918 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.73 97.85 121530000 59941000 57413000 4176600 0 0 0 0 0 0 0 0 0 0 0 0 10859 964 9901 92254;92255;92256;92257;92258 73690;73691;73692;73693;73694;73695 73690 5 EEEHDCFLEEIMTK Oxidation (M) 1824.7546 0.75461586 964 P12268 IMPDH2 Inosine-5'-monophosphate dehydrogenase 2 yes yes 0 1 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 75.39 69.489 3 0.0029779 90118 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.377 46.94 27531000 21111000 6420300 0 0 0 0 0 0 0 0 0 0 0 0 0 10860 964 9901 92259;92260 73696;73697 73697 1258 2 EEEIAALVIDNGSGMCK Acetyl (Protein N-term);Oxidation (M) 1892.8496 0.84957888 1951 P63261 ACTG1 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.35 3.33 5 4 2 44 4 6 1 3 4 4 4 3 3 4 3 4 4 3 5 93.306 93.213 2;3 0 90858 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 259.75 232.96 13918000000 167270000 2102200000 18903000 245840000 1038300000 841000000 852830000 641440000 664270000 1229300000 1242100000 1913300000 728060000 660600000 1572800000 10861 1951 9902 92261;92262;92263;92264;92265;92266;92267;92268;92269;92270;92271;92272;92273;92274;92275;92276;92277;92278;92279;92280;92281;92282;92283;92284;92285;92286;92287;92288;92289;92290;92291;92292;92293;92294;92295;92296;92297;92298;92299;92300;92301;92302;92303;92304;92305;92306;92307;92308;92309;92310;92311;92312;92313;92314;92315 73698;73699;73700;73701;73702;73703;73704;73705;73706;73707;73708;73709;73710;73711;73712;73713;73714;73715;73716;73717;73718;73719;73720;73721;73722;73723;73724;73725;73726;73727;73728;73729;73730;73731;73732;73733;73734;73735;73736;73737;73738;73739;73740;73741;73742;73743;73744;73745;73746;73747;73748;73749;73750;73751;73752;73753;73754;73755;73756;73757;73758;73759;73760;73761;73762;73763;73764;73765;73766;73767;73768;73769;73770 73732 3135 72 EEEIAALVIDNGSGMCK Acetyl (Protein N-term) 1876.8547 0.85466426 1951 P63261 ACTG1 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.67 4.21 7 5 2 13 7 6 1 1 1 1 1 1 1 1 1 1 1 1 2 97.809 97.658 2;3 0 111776 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 297.32 274.68 14167000000 3808600000 8475000000 9190200 17657000 137660000 76324000 67849000 123290000 64409000 264370000 195080000 205630000 47638000 138100000 536250000 10862 1951 9902 92316;92317;92318;92319;92320;92321;92322;92323;92324;92325;92326;92327;92328;92329;92330;92331;92332;92333;92334;92335;92336;92337;92338;92339;92340;92341;92342 73771;73772;73773;73774;73775;73776;73777;73778;73779;73780;73781;73782;73783;73784;73785;73786;73787;73788;73789;73790;73791;73792;73793;73794;73795;73796;73797;73798;73799;73800;73801;73802;73803;73804;73805;73806;73807;73808;73809;73810;73811 73807 37 EEEIAALVIDNGSGMCK Oxidation (M) 1850.839 0.83901419 1951 P63261 ACTG1 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed yes yes 0 1 0 By MS/MS 3 0 1 1 79.645 76.275 2 0.0013331 91589 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 59.57 51.057 2288800 0 2288800 0 0 0 0 0 0 0 0 0 0 0 0 0 10863 1951 9902 92343 73812 73812 3135 1 EEEIEFLYNENTVR Unmodified 1783.8265 0.8264589 1441 P41252 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 78.976 79.117 2 0.00042388 91423 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 90.05 77.837 13343000 0 0 0 0 0 3734900 0 0 2648100 0 0 0 0 0 6960100 10864 1441 9903 92344;92345;92346 73813 73813 1 EEEITLYPDK Unmodified 1235.5921 0.59214885 3702 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 0 0 0 By MS/MS 10 0 1 1 55.32 55.945 2 0.030408 62756 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.96 41.582 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10865 3702 9904 92347 73814 73814 1 EEELNAIRTENSSLTK Unmodified 1832.9116 0.91158551 3151 Q86UP2 KTN1 Kinectin yes yes 0 0 1 By MS/MS 3 0 1 1 53.556 48.666 3 0.0057334 60147 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 47.545 38.14 3851300 0 3851300 0 0 0 0 0 0 0 0 0 0 0 0 0 10866 3151 9905 92348 73815 73815 1 EEELQAALAR Unmodified 1128.5775 0.57750184 1356;1366;3090 P35579;Q7Z406;P35749 MYH9;MYH14;MYH11 Myosin-9;Myosin-14;Myosin-11 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 50.527 50.384 2 0.00068079 56957 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 121.62 69.931 47770000 0 0 0 8576900 10755000 0 11467000 6667600 0 0 0 0 0 10304000 0 10867 1356;3090;1366 9906 92349;92350;92351;92352;92353 73816;73817;73818;73819;73820 73816 5 EEELQAALARVEEEAAQK Unmodified 2013.0015 0.0014631481 1356 P35579 MYH9 Myosin-9 yes yes 0 0 1 By MS/MS 2 0 1 1 91.38 86.47 3 1.166E-05 107511 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.837 65.582 17407000 0 17407000 0 0 0 0 0 0 0 0 0 0 0 0 0 10868 1356 9907 92354 73821 73821 1 EEEMTEEEK Unmodified 1152.4492 0.44924936 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 10.794 10.936 2 0.0099835 9919 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 77.318 41.699 16163000 0 0 0 0 509320 2286200 1055700 873610 1589100 1265300 0 3318200 1535900 1778600 1950600 10869 213 9908 92355;92356;92357;92358;92359;92360;92361;92362;92363;92364 73822;73823;73824;73825;73826 73822 5 EEEMVASALETVSEK Unmodified 1650.7658 0.76583247 3168 Q86VN1 VPS36 Vacuolar protein-sorting-associated protein 36 yes yes 0 0 0 By MS/MS 2 0 1 1 80.876 76.171 2 0.00082931 94809 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 111.94 80.442 25732000 0 25732000 0 0 0 0 0 0 0 0 0 0 0 0 0 10870 3168 9909 92365 73827 73827 1 EEENASVIDSAELQAYPALVVEK Unmodified 2503.233 0.23297923 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS 2.4 0.49 3 2 2 3 90.637 85.696 2;3 2.938E-121 107179 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 228.9 217.63 195670000 21812000 173860000 0 0 0 0 0 0 0 0 0 0 0 0 0 10871 1986 9910 92366;92367;92368;92369;92370 73828;73829;73830;73831;73832;73833 73830 6 EEENEIREDEEPPRK Unmodified 1897.8654 0.8653636 3898 Q96JP5 ZFP91 E3 ubiquitin-protein ligase ZFP91 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 21.767 21.969 3 0.0030218 22863 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 65.472 65.472 92676000 0 0 0 0 5767700 19254000 4897000 0 7890100 8105400 13555000 0 11520000 10431000 11256000 10872 3898 9911 92371;92372;92373;92374;92375;92376;92377;92378;92379 73834;73835;73836;73837;73838;73839 73834 5 EEENGQGHLK Unmodified 1139.5207 0.52071524 4442 Q9H814 PHAX Phosphorylated adapter RNA export protein yes yes 0 0 0 By MS/MS 2.5 0.5 2 2 4 6.4442 3.1432 2;3 1.0411E-05 5179 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 152.63 123.48 241900000 0 241900000 0 0 0 0 0 0 0 0 0 0 0 0 0 10873 4442 9912 92380;92381;92382;92383 73840;73841;73842;73843 73841 3 EEENRRLEEK Unmodified 1330.6477 0.64770667 4940 Q9UJU6 DBNL Drebrin-like protein yes yes 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 7.3868 4.5205 3 0.03559 6414 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 90.906 49.366 278250000 39903000 0 238350000 0 0 0 0 0 0 0 0 0 0 0 0 10874 4940 9913 92384;92385 73844 73844 1 EEENVGIDITEPLYMQR Oxidation (M) 2050.9517 0.95173576 1332 P33991 MCM4 DNA replication licensing factor MCM4 yes yes 0 1 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 7.86 3.4 1 1 5 2 1 1 1 1 1 81.154 80.113 2 1.9783E-54 98256 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 152.4 137.52 89495000 0 65637000 0 0 0 3185800 0 0 1408100 5941500 4038800 0 0 0 9284200 10875 1332 9914 92386;92387;92388;92389;92390;92391;92392 73845;73846;73847;73848;73849 73846 1994 5 EEEPGAPGK Unmodified 912.41888 0.41887593 1081 P18858 LIG1 DNA ligase 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.58 3.17 1 1 10 2 1 1 1 1 1 1 1 1 1 1 17.326 17.532 2 0.0085848 7905 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 69.198 22.827 85268000 40656000 0 0 3777300 2695400 5985400 5182700 3510300 2774700 0 0 6604300 4062700 3855000 6164700 10876 1081 9915 92393;92394;92395;92396;92397;92398;92399;92400;92401;92402;92403;92404 73850;73851;73852;73853;73854;73855;73856;73857 73850 8 EEEPPEK Unmodified 856.38143 0.38142779 2004 P82979 SARNP SAP domain-containing ribonucleoprotein yes yes 0 0 0 By MS/MS 1 0 1 1 106.88 112.14 2 0.02978 92912 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 94.262 63.817 52688000 52688000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10877 2004 9916 92405 73858 73858 1 EEEPVFTR Unmodified 1005.4767 0.47672516 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 35.909 36.165 2 0.036738 39077 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.55 55.811 58044000 0 0 0 0 2312000 2869200 3726500 0 0 15280000 3657500 7307200 3137600 0 19754000 10878 5216 9917 92406;92407;92408;92409;92410;92411;92412;92413 73859 73859 0 EEEPVFTRQDSNRSEK Unmodified 1949.9079 0.90789711 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 2 By MS/MS 2 0 1 1 27.789 24.683 3 0.030026 31307 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 46.964 29.896 5373400 0 0 5373400 0 0 0 0 0 0 0 0 0 0 0 0 10879 5216 9918 92414 73860 73860 1 EEEQLIELIEK Unmodified 1371.7133 0.71332662 2763 Q5SXM2 SNAPC4 snRNA-activating protein complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 8.25 3.03 1 3 1 1 1 1 85.054 83.888 2 0.0026508 97499 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 80.231 13.961 7095500 0 1506000 0 1684600 0 0 0 0 0 3904800 0 0 0 0 0 10880 2763 9919 92415;92416;92417;92418 73861;73862;73863 73862 3 EEESEHHLQR Unmodified 1292.5745 0.57454173 4364;2694 Q9H2F5;Q52LR7 EPC1;EPC2 Enhancer of polycomb homolog 1;Enhancer of polycomb homolog 2 no no 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.1036 6.221 3 0.017787 3956 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 35.541 26.207 42530000 0 0 0 2438500 2192700 2305200 3531100 2697600 3313700 3716800 4829900 5057900 3580300 2805500 6060800 10881 4364;2694 9920 92419;92420;92421;92422;92423;92424;92425;92426;92427;92428;92429;92430 73864 73864 1 EEESEMAEASRK Unmodified 1394.5984 0.59837321 2798 Q5TGY1 TMCO4 Transmembrane and coiled-coil domain-containing protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.305 13.461 3 0.0027878 12952 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 48.659 37.446 48467000 0 0 0 2673600 2468300 4430200 2127800 3100600 4363200 3420100 4985500 4598200 5204100 4278200 6817200 10882 2798 9921 92431;92432;92433;92434;92435;92436;92437;92438;92439;92440;92441;92442 73865;73866;73867;73868;73869;73870;73871;73872;73873;73874;73875 73873 10 EEESEMAEASRK Oxidation (M) 1410.5933 0.59328784 2798 Q5TGY1 TMCO4 Transmembrane and coiled-coil domain-containing protein 4 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 6.0468 6.1138 3 0.0026641 3045 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 45.915 41.301 12791000 0 0 0 1230100 1107900 0 0 1612700 2354100 0 0 3733400 0 2752400 0 10883 2798 9921 92443;92444;92445;92446;92447;92448 73876;73877 73876 4430 2 EEESIEGEK Unmodified 1048.456 0.4560493 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 12.569 12.661 2 0.013016 11762 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 60.436 24.556 38154000 0 0 0 3289800 2602800 0 4757800 3663400 7489500 8268000 8082500 0 0 0 0 10884 2451 9922 92449;92450;92451;92452;92453;92454;92455;92456;92457;92458 73878;73879;73880;73881;73882;73883;73884;73885 73885 8 EEESQQQAVLEQERR Unmodified 1857.8817 0.88168236 5014 Q9UM54 MYO6 Unconventional myosin-VI yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.08 30.271 3 3.3538E-23 31617 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 112.42 92.33 154360000 0 0 0 8762800 7713900 11146000 7842800 13032000 8749600 17702000 8249100 17631000 17312000 16640000 19583000 10885 5014 9923 92459;92460;92461;92462;92463;92464;92465;92466;92467;92468;92469;92470 73886;73887;73888;73889;73890;73891;73892;73893;73894;73895;73896 73889 11 EEESVHVTQRK Unmodified 1340.6684 0.66844211 4837 Q9UBD5 ORC3 Origin recognition complex subunit 3 yes yes 0 0 1 By matching By MS/MS 2 0 2 1 1 11.088 8.0154 3 0.033526 10464 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 38.402 38.402 35727000 12793000 0 22933000 0 0 0 0 0 0 0 0 0 0 0 0 10886 4837 9924 92471;92472 73897 73897 1 EEETAAAPPVEEGEEQKPPAAEELAVDTGK Unmodified 3120.4623 0.46226347 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 67.796 66.625 3 2.7514E-34 83912 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.091 82.187 308240000 16433000 27539000 0 11417000 19678000 19758000 18369000 22358000 18887000 21194000 24221000 31439000 21441000 22202000 33310000 10887 5262 9925 92473;92474;92475;92476;92477;92478;92479;92480;92481;92482;92483;92484;92485;92486;92487 73898;73899;73900;73901;73902;73903;73904;73905;73906;73907;73908;73909;73910;73911;73912;73913;73914;73915;73916 73904 19 EEETEAAIGAPPTATEGPETK Unmodified 2126.9855 0.98553831 2262 Q13263 TRIM28 Transcription intermediary factor 1-beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.36 2.32 1 13 1 2 2 1 1 2 1 1 1 2 55.388 56.052 2;3 2.356E-63 57676 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 141.46 118.74 141440000 15788000 0 0 0 0 22198000 17043000 0 8410900 6824400 17319000 7277600 7842500 9511600 29230000 10888 2262 9926 92488;92489;92490;92491;92492;92493;92494;92495;92496;92497;92498;92499;92500;92501 73917;73918;73919;73920;73921;73922;73923;73924;73925 73920 9 EEETEAAIGAPPTATEGPETKPVLMALAEGPGAEGPR Unmodified 3672.7829 0.78288611 2262 Q13263 TRIM28 Transcription intermediary factor 1-beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 87.273 86.342 3 6.4816E-49 100442 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 70.073 68.509 82447000 8584600 0 0 0 3311800 0 0 0 3177400 15420000 9807000 8209200 0 2927800 31010000 10889 2262 9927 92502;92503;92504;92505;92506;92507;92508;92509 73926;73927;73928;73929;73930;73931;73932;73933 73926 8 EEETEAAIGAPPTATEGPETKPVLMALAEGPGAEGPR Oxidation (M) 3688.7778 0.77780073 2262 Q13263 TRIM28 Transcription intermediary factor 1-beta yes yes 0 1 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 2 2 2 1 3 82.853 82.969 3;4 2.6047E-87 95555 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.75 96.96 332670000 0 0 0 1835300 0 0 0 9262400 10254000 40628000 49795000 77393000 20464000 14292000 108750000 10890 2262 9927 92510;92511;92512;92513;92514;92515;92516;92517;92518;92519;92520;92521;92522;92523 73934;73935;73936;73937;73938;73939;73940;73941;73942;73943;73944 73935 3682 10 EEETSIDVAGKPNEVTK Unmodified 1844.9004 0.90035212 1727 P53985 SLC16A1 Monocarboxylate transporter 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 40.443 39.769 3 2.054E-07 44436 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 84.14 72.117 115770000 0 32615000 0 0 4472600 9847100 3865800 4382300 5513700 8335200 12180000 18927000 6638400 8990200 0 10891 1727 9928 92524;92525;92526;92527;92528;92529;92530;92531;92532;92533;92534;92535;92536 73945;73946;73947;73948;73949;73950;73951;73952;73953;73954;73955;73956;73957;73958;73959;73960;73961 73958 17 EEEVTGPVIAPLFPQK Unmodified 1752.9298 0.92980175 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 85.5 85.639 2 0.00026701 98396 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 93.096 76.958 23505000 0 0 0 0 0 0 0 0 0 0 3351200 3733800 2899300 5741400 7779500 10892 528 9929 92537;92538;92539;92540;92541;92542 73962;73963;73964;73965 73965 3 EEEWDPEYTPK Unmodified 1421.5987 0.59869079 5122;4742 Q9Y2W1;Q9NYF8 THRAP3;BCLAF1 Thyroid hormone receptor-associated protein 3;Bcl-2-associated transcription factor 1 no no 0 0 0 By MS/MS 2 0 1 1 58.203 52.372 2 0.0062567 67459 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.275 65.97 28139000 0 28139000 0 0 0 0 0 0 0 0 0 0 0 0 0 10893 5122;4742 9930 92543 73966 73966 1 EEEYSDLKGVMKK Oxidation (M) 1570.7549 0.75487386 5358 yes yes 0 1 2 By MS/MS By MS/MS 2 0 2 1 1 90.731 87.047 3 0.011924 108151 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 49.448 20.145 + 27521000 0 26539000 982300 0 0 0 0 0 0 0 0 0 0 0 0 10894 5358 9931 92544;92545 73967 73967 6742 0 EEFAIMQTPAGELYDK Oxidation (M) 1856.8502 0.8502308 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 75.503 75.505 2 1.8689E-19 87229 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 106.49 85.12 32343000 0 0 0 1771400 3387800 4464500 2846200 2516500 0 4530200 0 4742800 3110100 4973600 0 10895 3641 9932 92546;92547;92548;92549;92550;92551;92552;92553;92554 73968;73969;73970;73971;73972;73973;73974;73975 73973 5146 8 EEFAIMQTPAGELYDK Unmodified 1840.8553 0.85531618 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 82.849 82.954 2 0.0035776 96081 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 58.674 48.721 3008500 0 0 0 0 0 1745600 0 1262900 0 0 0 0 0 0 0 10896 3641 9932 92555;92556 73976 73976 1 EEFASTCPDDEEIELAYEQVAK Unmodified 2572.1163 0.11629449 140 O00299 CLIC1 Chloride intracellular channel protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 2 2 2 2 86.124 86.276 2;3 7.7095E-14 99714 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.678 76.226 76349000 0 0 0 0 0 0 0 0 0 0 12273000 8225400 0 4729400 51121000 10897 140 9933 92557;92558;92559;92560;92561;92562;92563;92564 73977;73978;73979;73980;73981;73982;73983;73984 73977 8 EEFAVPENSSVQQFK Unmodified 1737.821 0.82097959 4899;5018 Q9UHD9;Q9UMX0 UBQLN2;UBQLN1 Ubiquilin-2;Ubiquilin-1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 69.67 68.842 2 4.8713E-35 79095 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 152.85 135.49 2687900000 0 1330300000 1581800 48506000 51714000 104140000 74344000 106360000 99346000 127980000 140200000 134180000 127250000 120770000 221270000 10898 4899;5018 9934 92565;92566;92567;92568;92569;92570;92571;92572;92573;92574;92575;92576;92577;92578;92579 73985;73986;73987;73988;73989;73990;73991;73992;73993;73994;73995;73996;73997;73998 73996 14 EEFDRLDSSAVLDTGK Unmodified 1780.8479 0.84792262 1464 P42704 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 67.483 65.897 2;3 0.00011396 80136 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 69.331 61.922 279170000 22896000 160720000 3678500 2849400 2611000 10469000 3718300 6462200 5072000 8356900 11453000 10416000 7328800 7304700 15840000 10899 1464 9935 92580;92581;92582;92583;92584;92585;92586;92587;92588;92589;92590;92591;92592;92593;92594;92595;92596 73999;74000;74001;74002;74003;74004;74005;74006;74007;74008;74009 74004 10 EEFEHQQK Unmodified 1073.4778 0.47778779 934 P11142 HSPA8 Heat shock cognate 71 kDa protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 6.04 3.97 1 9 2 12 6 4 2 1 1 1 1 1 1 1 1 1 1 1 1 11.31 10.505 2 3.3164E-112 3697 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 220.25 159.47 11373000000 1002300000 9369400000 406410000 33708000 36130000 50560000 59233000 48000000 50638000 28491000 57034000 42497000 34236000 46928000 107770000 10900 934 9936 92597;92598;92599;92600;92601;92602;92603;92604;92605;92606;92607;92608;92609;92610;92611;92612;92613;92614;92615;92616;92617;92618;92619;92620 74010;74011;74012;74013;74014;74015;74016;74017;74018;74019;74020;74021;74022;74023;74024;74025;74026;74027;74028;74029;74030;74031;74032;74033;74034;74035 74031 22 EEFLTGTEK Unmodified 1052.5026 0.50260556 4642 Q9NUA8 ZBTB40 Zinc finger and BTB domain-containing protein 40 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 37.399 37.431 2 0.0041698 41257 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 87.696 62.246 25808000 0 0 0 0 3696300 4764100 4387200 3225200 4460000 0 0 0 0 5275200 0 10901 4642 9937 92621;92622;92623;92624;92625;92626;92627;92628 74036;74037;74038;74039;74040;74041 74039 6 EEFPDFDEETGILPK Unmodified 1764.8094 0.80941185 2414 Q14562 DHX8 ATP-dependent RNA helicase DHX8 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 88.193 84.687 2 0.006717 105009 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.728 57.22 36346000 0 35075000 1271600 0 0 0 0 0 0 0 0 0 0 0 0 10902 2414 9938 92629;92630;92631 74042;74043 74042 2 EEFPNENQVVFAR Unmodified 1577.7474 0.74742071 4123 Q9BS26 ERP44 Endoplasmic reticulum resident protein 44 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 70.4 70.598 2 6.3548E-08 80467 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.48 94.285 41098000 0 0 0 0 0 3729600 0 2286400 2471500 3733200 4403300 7175400 4520800 3017000 9760700 10903 4123 9939 92632;92633;92634;92635;92636;92637;92638;92639;92640 74044;74045;74046;74047;74048;74049;74050;74051;74052;74053 74046 9 EEFQELLLEYSELFYELELDAK Unmodified 2749.3262 0.32621091 4615 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 106.27 99.83 3 1.0662E-40 125797 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 125.73 118.93 28911000 21698000 7212600 0 0 0 0 0 0 0 0 0 0 0 0 0 10904 4615 9940 92641;92642 74054;74055 74055 2 EEFTAFLHPEEYDYMK Oxidation (M) 2063.8823 0.88225921 376 O43852 CALU Calumenin yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.12 3.72 2 1 5 1 2 1 1 1 1 1 82.721 80.809 2;3 8.2834E-05 101518 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.428 63.314 255170000 19629000 191810000 0 0 0 0 0 2630700 0 0 5496900 4568900 0 3196100 27837000 10905 376 9941 92643;92644;92645;92646;92647;92648;92649;92650 74056;74057;74058;74059 74056 477 2 EEFTAFLHPEEYDYMK Unmodified 2047.8873 0.88734459 376 O43852 CALU Calumenin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 89.195 84.527 2;3 9.9419E-51 107037 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 190.46 182.05 111690000 14803000 93955000 2937200 0 0 0 0 0 0 0 0 0 0 0 0 10906 376 9941 92651;92652;92653;92654 74060;74061;74062 74062 2 EEFTEALRDLK Unmodified 1349.6827 0.68269519 1243 P29144 TPP2 Tripeptidyl-peptidase 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.67 3.77 4 2 1 1 2 1 1 74.321 71.323 2;3 0.00034403 87861 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 99.283 73.809 258100000 118390000 91822000 40203000 0 0 0 0 0 0 0 0 0 0 1621800 6071300 10907 1243 9942 92655;92656;92657;92658;92659;92660 74063;74064;74065;74066;74067 74066 3 EEFTSGGPLGQK Unmodified 1248.5986 0.59863121 1471 P43034 PAFAH1B1 Platelet-activating factor acetylhydrolase IB subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 1 2 1 1 2 1 1 1 1 1 1 44.695 43.454 2 2.9561E-28 58145 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 175.51 108.48 1606400000 0 1428500000 7131900 8237900 0 6206600 0 0 0 15022000 34969000 29089000 0 15749000 61531000 10908 1471 9943 92661;92662;92663;92664;92665;92666;92667;92668;92669;92670;92671;92672;92673 74068;74069;74070;74071;74072;74073;74074;74075;74076;74077;74078;74079;74080;74081 74074 14 EEFVEDAAALK Unmodified 1220.5925 0.5924832 4387 Q9H3U1 UNC45A Protein unc-45 homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 61.879 60.698 2 0.00094189 68614 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 76.17 64.807 477790000 12132000 351640000 0 5211500 4174300 11196000 4789300 8263600 4326600 13095000 9121000 9979800 9646000 8453600 25762000 10909 4387 9944 92674;92675;92676;92677;92678;92679;92680;92681;92682;92683;92684;92685;92686;92687;92688 74082;74083;74084;74085;74086;74087;74088;74089;74090;74091;74092;74093;74094;74095;74096 74092 15 EEGDDGQDLR Unmodified 1132.4633 0.46325994 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 11.865 12.079 2 0.0088751 11194 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 58.981 51.413 15754000 0 0 0 0 0 1979000 1392800 1280700 0 1700100 1661700 2140900 2324500 1477000 1797700 10910 2193 9945 92689;92690;92691;92692;92693;92694;92695;92696;92697 74097;74098;74099;74100;74101 74100 5 EEGDDGQDLRRTESDSGLK Unmodified 2105.9461 0.94613311 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 0 2 By MS/MS 2 0 1 1 34.686 28.454 3 3.9921E-05 39865 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.279 53.89 8746100 8746100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10911 2193 9946 92698 74102 74102 1 EEGDPLQR Unmodified 942.44067 0.44067401 413 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 22.094 22.307 2 0.035595 23276 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 52.403 21.329 82002000 0 0 0 4322200 3686900 7945800 4686000 5189700 0 9611600 8399900 10995000 7854800 7649000 11661000 10912 413 9947 92699;92700;92701;92702;92703;92704;92705;92706;92707;92708;92709 74103 74103 1 EEGDPLQRVQSHQQASEEK Unmodified 2194.0251 0.025052137 413 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta yes yes 0 0 1 By MS/MS 2 0 2 2 35.88 32.496 3;4 0.00063196 41181 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 53.773 35.617 22564000 0 0 22564000 0 0 0 0 0 0 0 0 0 0 0 0 10913 413 9948 92710;92711 74104;74105 74105 2 EEGDVMDK Unmodified 921.37496 0.37496221 2425 Q14671 PUM1 Pumilio homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 11.67 11.75 2 0.039356 10690 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 50.703 30.148 41489000 0 0 0 3222800 4097000 5003200 3827300 5883900 5128200 3652900 0 0 3775100 0 6898800 10914 2425 9949 92712;92713;92714;92715;92716;92717;92718;92719;92720 74106;74107;74108 74108 3 EEGEAFAR Unmodified 907.40356 0.40356022 1828 P61019;Q8WUD1 RAB2A;RAB2B Ras-related protein Rab-2A;Ras-related protein Rab-2B yes no 0 0 0 By MS/MS 10 0 1 1 19.201 19.056 2 0.047352 19547 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 73.616 38.724 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10915 1828 9950 92721 74109 74109 1 EEGEHIREMVK Unmodified 1355.6503 0.65034921 4023 Q99567 NUP88 Nuclear pore complex protein Nup88 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 27.416 27.636 3 0.0078673 29699 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 48.284 38.232 95996000 0 0 0 0 6041000 14589000 0 11306000 13798000 0 9825600 18522000 13597000 8317500 0 10916 4023 9951 92722;92723;92724;92725;92726;92727;92728;92729 74110 74110 1 EEGEVPASAFQK Unmodified 1290.6092 0.6091959 3715 Q969G5 PRKCDBP Protein kinase C delta-binding protein yes yes 0 0 0 By MS/MS 2 0 1 1 46.871 41.424 2 2.529E-06 53809 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.1 77.478 10585000 0 10585000 0 0 0 0 0 0 0 0 0 0 0 0 0 10917 3715 9952 92730 74111 74111 1 EEGGPGPVSTPDNRK Unmodified 1538.7325 0.73249893 463 O75150 RNF40 E3 ubiquitin-protein ligase BRE1B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.89 2.72 3 1 24 1 2 1 2 2 2 2 2 2 2 2 2 2 2 2 19.104 18.723 2;3 1.0682E-05 18500 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 71.531 60.296 441130000 9742000 79589000 4721900 25609000 19158000 25279000 26674000 26099000 22872000 29301000 26232000 33750000 35019000 26080000 51003000 10918 463 9953 92731;92732;92733;92734;92735;92736;92737;92738;92739;92740;92741;92742;92743;92744;92745;92746;92747;92748;92749;92750;92751;92752;92753;92754;92755;92756;92757;92758 74112;74113;74114;74115;74116;74117;74118;74119;74120;74121;74122;74123;74124;74125;74126;74127;74128 74119 16 EEGIENFDVYAIK Unmodified 1525.73 0.73003931 2997 Q6YN16 HSDL2 Hydroxysteroid dehydrogenase-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 80.893 80.997 2 4.5187E-12 93450 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 123.86 105.55 67311000 0 0 0 0 2993900 9469100 3741300 5295400 5214500 5675900 5705700 5589300 4607700 5790800 13227000 10919 2997 9954 92759;92760;92761;92762;92763;92764;92765;92766;92767;92768;92769 74129;74130;74131;74132;74133;74134;74135;74136;74137 74131 9 EEGIENFDVYAIKPGHPLQPDFFLDEYPEAVSK Unmodified 3792.8199 0.81992354 2997 Q6YN16 HSDL2 Hydroxysteroid dehydrogenase-like protein 2 yes yes 0 0 1 By MS/MS 2 0 1 1 97.536 89.406 4 3.4236E-06 115454 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 44.615 39.993 20981000 20981000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10920 2997 9955 92770 74138 74138 1 EEGIGPENLR Unmodified 1112.5462 0.54620171 2231 Q13085 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 43.375 43.605 2 0.0056704 49125 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 68.016 44.945 103500000 0 0 0 0 5710200 15225000 5750000 6820700 4373100 11143000 10495000 12975000 0 10506000 20507000 10921 2231 9956 92771;92772;92773;92774;92775;92776;92777;92778;92779;92780 74139;74140;74141;74142 74139 4 EEGLAEETLK Unmodified 1117.5503 0.55028404 2652 Q2M389 KIAA1033 WASH complex subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 7.71 3.61 4 10 2 2 1 1 1 1 1 1 1 1 1 1 40.628 39.731 2 1.6796E-05 49825 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.07 84.619 140200000 5905900 74627000 0 4482000 5856200 6257600 5588200 0 3933500 7740500 6348100 0 9476600 9985600 0 10922 2652 9957 92781;92782;92783;92784;92785;92786;92787;92788;92789;92790;92791;92792;92793;92794 74143;74144;74145;74146;74147;74148;74149;74150;74151 74145 9 EEGNELVK Unmodified 916.45018 0.45017606 2577 Q15785 TOMM34 Mitochondrial import receptor subunit TOM34 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 17.361 17.547 2 0.0065186 17682 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 100.19 37.474 366410000 0 0 0 23918000 22827000 27920000 33467000 22763000 23410000 30182000 35343000 34535000 39900000 27812000 44328000 10923 2577 9958 92795;92796;92797;92798;92799;92800;92801;92802;92803;92804;92805;92806 74152;74153;74154;74155;74156;74157;74158;74159;74160;74161 74152 4 EEGNEQFK Unmodified 979.42469 0.42468959 4034 Q99614 TTC1 Tetratricopeptide repeat protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 9.0589 9.4646 2 0.029645 7665 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 56.011 18.99 3592200 0 0 0 0 0 0 0 0 0 0 3592200 0 0 0 0 10924 4034 9959 92807 74162 74162 1 EEGNLEAVLNALDK Unmodified 1513.7624 0.76240208 2917 Q6P1K2 PMF1 Polyamine-modulated factor 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 7 3.69 1 1 3 2 1 1 1 91.611 90.083 2 9.0987E-06 112110 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.08 106.38 40743000 0 35714000 0 0 0 0 0 0 0 1128200 1295600 0 0 0 2605000 10925 2917 9960 92808;92809;92810;92811;92812 74163;74164;74165 74163 3 EEGPAAWEGPNQDLPR Unmodified 1764.8067 0.80672651 4392 Q9H467 CUEDC2 CUE domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 65.533 65.907 2 2.8149E-10 74789 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 108.56 93.873 19368000 0 0 0 0 0 0 0 0 0 4335800 0 5667000 0 0 9365100 10926 4392 9961 92813;92814;92815 74166;74167;74168;74169 74167 4 EEGPAAWEGPNQDLPRR Unmodified 1920.9078 0.90783753 4392 Q9H467 CUEDC2 CUE domain-containing protein 2 yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 55.357 55.787 3 0.0043703 62548 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.55 22.211 7885700 0 0 0 0 0 0 0 0 0 0 0 0 2721300 0 5164300 10927 4392 9962 92816;92817 74170 74170 1 EEGRAGAGLGDGERK Unmodified 1500.7281 0.72808225 4230 Q9BXP5 SRRT Serrate RNA effector molecule homolog yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.72 2 13 1 1 2 1 1 1 1 1 1 1 1 1 1 1 8.8309 8.5066 3 0.0067827 7082 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 50.843 39.63 146440000 10485000 0 42508000 5123300 2081500 3352700 4324500 3757900 4659000 6799200 19064000 11807000 10074000 7958500 14449000 10928 4230 9963 92818;92819;92820;92821;92822;92823;92824;92825;92826;92827;92828;92829;92830;92831;92832 74171;74172;74173;74174 74174 1 EEGSENAVK Unmodified 961.43525 0.43525428 4636 Q9NTK5 OLA1 Obg-like ATPase 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0.816 1 1 1 2 1 6.0846 2.6519 2 0.00039885 4610 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.81 53.676 43167000 541250 42626000 0 0 0 0 0 0 0 0 0 0 0 0 0 10929 4636 9964 92833;92834;92835 74175;74176 74175 2 EEGSEQAPLMSEDELINIIDGVLRDDDK Oxidation (M) 3145.4609 0.46088327 3464 Q8NI22 MCFD2 Multiple coagulation factor deficiency protein 2 yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 102.2 95.782 3 4.196E-47 120650 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 111.43 105.88 103210000 68319000 34889000 0 0 0 0 0 0 0 0 0 0 0 0 0 10930 3464 9965 92836;92837 74177;74178 74177 4994 2 EEGSEQAPLMSEDELINIIDGVLRDDDK Unmodified 3129.466 0.46596864 3464 Q8NI22 MCFD2 Multiple coagulation factor deficiency protein 2 yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 2 2 2 2 102.46 97.461 3 3.267E-137 121829 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 154.88 149.22 195350000 151050000 44308000 0 0 0 0 0 0 0 0 0 0 0 0 0 10931 3464 9965 92838;92839;92840;92841 74179;74180;74181;74182 74182 4 EEGSRDPADPSQQGR Unmodified 1627.7186 0.71863978 9 A1L390 PLEKHG3 Pleckstrin homology domain-containing family G member 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 9.913 10.025 3 0.0017493 8765 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 47.037 43.802 21990000 0 0 0 1912300 1648200 2222700 2293200 1748700 1352700 1819500 0 2947500 1829800 1772200 2443500 10932 9 9966 92842;92843;92844;92845;92846;92847;92848;92849;92850;92851;92852 74183;74184;74185;74186;74187;74188 74184 6 EEGVIDSSDK Unmodified 1077.4826 0.4825984 1751 P55010 EIF5 Eukaryotic translation initiation factor 5 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 17.819 13.92 2 0.0035311 18079 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.309 77.836 14786000 7133600 7652100 0 0 0 0 0 0 0 0 0 0 0 0 0 10933 1751 9967 92853;92854 74189;74190;74191 74189 3 EEGVQRAREEEEK Unmodified 1587.7489 0.74887728 1409 P40222 TXLNA Alpha-taxilin yes yes 0 0 2 By MS/MS By MS/MS 2 0 3 2 1 11.503 8.1238 3;4 0.006622 12464 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.69 16.569 142930000 74717000 0 68213000 0 0 0 0 0 0 0 0 0 0 0 0 10934 1409 9968 92855;92856;92857 74192;74193;74194;74195 74192 2 EEGVSQQGQGAGSAPSGSGSSWVQGDDPSMSLTQK Unmodified 3435.5121 0.51208399 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 70.55 70.622 3 7.9807E-09 80753 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 31.757 29.828 53585000 0 0 0 2643700 2940400 0 0 4518800 3817800 7001100 7202900 8359300 4049000 3842000 9210000 10935 4285 9969 92858;92859;92860;92861;92862;92863;92864;92865;92866;92867 74196;74197;74198;74199;74200;74201 74197 6 EEHGGLIR Unmodified 909.46683 0.46682918 1202 P26368 U2AF2 Splicing factor U2AF 65 kDa subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 14.353 14.49 2 3.8188E-07 14043 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 158.12 71.251 253440000 0 0 0 20593000 16966000 22257000 23279000 22313000 18890000 32983000 33619000 0 32017000 22299000 8223400 10936 1202 9970 92868;92869;92870;92871;92872;92873;92874;92875;92876;92877;92878 74202;74203;74204;74205;74206;74207;74208;74209;74210;74211;74212 74211 11 EEHGPEACDAAK Unmodified 1312.5354 0.53537903 255 O15119 TBX3 T-box transcription factor TBX3 yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.5144 7.6416 3 0.02101 5393 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 27.681 20.553 107190000 0 0 0 2363900 5209800 5102500 6717200 7683600 7675100 9002400 21036000 13036000 8114000 9498300 11754000 10937 255 9971 92879;92880;92881;92882;92883;92884;92885;92886;92887;92888;92889;92890 74213;74214 74214 1 EEHGSGAADANQAEGHESNFIAQLASQK Unmodified 2895.302 0.30195528 4641 Q9NU22 MDN1 Midasin yes yes 0 0 0 By MS/MS 2 0 1 1 74.122 71.17 4 3.6782E-07 86942 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 53.865 44.279 4131400 0 0 4131400 0 0 0 0 0 0 0 0 0 0 0 0 10938 4641 9972 92891 74215 74215 1 EEHKPQQNGISPR Unmodified 1518.7539 0.75390307 3699 Q92995 USP13 Ubiquitin carboxyl-terminal hydrolase 13 yes yes 0 0 1 By matching By MS/MS By MS/MS 10 0 3 1 1 1 9.0916 9.3779 3 0.020528 7163 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 24.964 18.278 5051000 0 0 0 0 0 0 0 0 0 0 0 2587900 0 1099200 1363800 10939 3699 9973 92892;92893;92894 74216 74216 1 EEHLDVASPDK Unmodified 1238.5779 0.57789577 3722 Q969R5 L3MBTL2 Lethal(3)malignant brain tumor-like protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 30.221 25.828 2 0.018499 33885 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.626 47.724 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10940 3722 9974 92895 74217 74217 1 EEHRNQTQLSNK Unmodified 1482.7175 0.71751757 586 O94804 STK10 Serine/threonine-protein kinase 10 yes yes 0 0 1 By MS/MS 2 0 1 1 5.9431 3.7255 3 0.034873 5420 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 66.023 46.923 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10941 586 9975 92896 74218 74218 1 EEHSLHVQDPSSSSK Unmodified 1665.7594 0.75944196 4900 Q9UHF7 TRPS1 Zinc finger transcription factor Trps1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 22.136 18.722 3 0.00020834 23736 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 81.703 72.509 14871000 0 9663500 5207300 0 0 0 0 0 0 0 0 0 0 0 0 10942 4900 9976 92897;92898 74219;74220 74220 2 EEHTQEEGTVPSR Unmodified 1497.6696 0.66956432 1429 P41162 ETV3 ETS translocation variant 3 yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 13.021 13.196 3 7.4164E-06 12484 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 71.558 57.895 43948000 0 0 0 5944500 3225300 0 3499200 3687900 0 6722200 3822400 4911800 4929900 2690700 4514000 10943 1429 9977 92899;92900;92901;92902;92903;92904;92905;92906;92907;92908 74221;74222;74223;74224;74225;74226 74221 6 EEIAQLAR Unmodified 928.49779 0.49779495 4054 Q99720 SIGMAR1 Sigma non-opioid intracellular receptor 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 38.281 38.529 2 0.0071277 41509 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 90.706 39.74 138650000 0 0 0 0 24498000 14917000 20111000 0 0 0 0 14085000 28900000 29295000 6845900 10944 4054 9978 92909;92910;92911;92912;92913;92914;92915;92916;92917 74227;74228;74229;74230;74231;74232 74229 6 EEIASISSLK Unmodified 1075.5761 0.57610486 2510 Q15276 RABEP1 Rab GTPase-binding effector protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.22 2.2 1 8 1 1 1 1 1 1 1 1 1 56.191 55.811 2 0.0081131 62477 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 60.828 45.33 22901000 0 3075900 0 0 0 1943900 2403900 0 0 2891900 3746800 0 2151800 1926700 4759800 10945 2510 9979 92918;92919;92920;92921;92922;92923;92924;92925;92926 74233;74234;74235;74236;74237;74238;74239 74238 6 EEIDLLNRDLDDIEDENEQLK Unmodified 2557.2031 0.20313566 3885 Q96IZ0 PAWR PRKC apoptosis WT1 regulator protein yes yes 0 0 1 By MS/MS 2 0 1 1 89.145 81.015 3 1.7256E-23 105332 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.17 87.315 11490000 11490000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10946 3885 9980 92927 74240 74240 1 EEIDREFHNK Unmodified 1315.6157 0.61567826 3415 Q8ND56 LSM14A Protein LSM14 homolog A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 3 24 1 1 1 2 2 2 2 2 2 2 2 2 2 2 2 19.965 19.698 2;3 0.012051 18875 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.972 61.765 783160000 40451000 12502000 73380000 37852000 35196000 46774000 51796000 46769000 38629000 76766000 71085000 80593000 67386000 37641000 66336000 10947 3415 9981 92928;92929;92930;92931;92932;92933;92934;92935;92936;92937;92938;92939;92940;92941;92942;92943;92944;92945;92946;92947;92948;92949;92950;92951;92952;92953;92954 74241;74242;74243;74244;74245;74246;74247;74248;74249 74242 0 EEIDSILNK Unmodified 1059.5448 0.54480473 1701 P52788 SMS Spermine synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 61.434 55.452 2 0.00046165 71279 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.83 47.988 1358600000 37233000 1314300000 7010400 0 0 0 0 0 0 0 0 0 0 0 0 10948 1701 9982 92955;92956;92957 74250;74251;74252;74253 74251 4 EEIEAQIK Unmodified 958.49713 0.49712625 131 O00233 PSMD9 26S proteasome non-ATPase regulatory subunit 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 32.858 31.972 2 0.0050992 40367 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145.04 86.877 349710000 19460000 228160000 0 0 4196200 0 0 0 5394400 8892200 17175000 20177000 8917300 10861000 26473000 10949 131 9983 92958;92959;92960;92961;92962;92963;92964;92965;92966;92967 74254;74255;74256;74257;74258;74259 74256 6 EEIEQSLTK Unmodified 1075.5397 0.53971935 2401 Q14258 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 36.682 31.01 2 0.038702 43362 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 92.439 56.044 121130000 16153000 104980000 0 0 0 0 0 0 0 0 0 0 0 0 0 10950 2401 9984 92968;92969 74260 74260 0 EEIERMVQEAEK Oxidation (M) 1505.7032 0.70317264 908 P0DMV9;P0DMV8 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching 5.11 3.75 9 3 7 4 5 3 1 1 1 1 1 1 1 33.161 30.506 2;3 3.4904E-13 38912 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 128.85 98.843 3644600000 321250000 1936500000 1337200000 0 0 0 5458000 0 4785500 3996900 5605200 14921000 0 5534000 9329800 10951 908 9985 92970;92971;92972;92973;92974;92975;92976;92977;92978;92979;92980;92981;92982;92983;92984;92985;92986;92987;92988 74261;74262;74263;74264;74265;74266;74267;74268;74269;74270;74271;74272;74273 74273 1169 10 EEIERMVQEAEK Unmodified 1489.7083 0.70825802 908 P0DMV9;P0DMV8 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.595 1 7 4 5 5 2 64.175 59.29 2;3 1.1304E-191 70195 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 261.35 210.55 5218700000 1357200000 2468200000 1393400000 0 0 0 0 0 0 0 0 0 0 0 0 10952 908 9985 92989;92990;92991;92992;92993;92994;92995;92996;92997;92998;92999;93000 74274;74275;74276;74277;74278;74279;74280;74281;74282;74283;74284;74285;74286;74287;74288;74289;74290;74291;74292;74293;74294;74295;74296;74297;74298;74299;74300;74301;74302;74303;74304 74279 31 EEIFGPVQPILK Unmodified 1368.7653 0.76530261 1527 P47895 ALDH1A3 Aldehyde dehydrogenase family 1 member A3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.8 3.92 2 3 1 1 1 1 1 85.152 83.763 2 1.8179E-05 104174 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.11 91.597 171090000 0 154910000 2398300 0 0 2554800 0 0 0 0 0 0 0 3001800 8233900 10953 1527 9986 93001;93002;93003;93004;93005 74305;74306;74307 74305 3 EEIGNVQLEK Unmodified 1157.5928 0.59281755 3151 Q86UP2 KTN1 Kinectin yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 49.713 44.415 2 0.00033947 57671 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.33 78.333 42985000 0 42985000 0 0 0 0 0 0 0 0 0 0 0 0 0 10954 3151 9987 93006;93007 74308;74309 74309 2 EEIIEAFVQELRK Unmodified 1602.8617 0.86172219 1629 P50552 VASP Vasodilator-stimulated phosphoprotein yes yes 0 0 1 By MS/MS By MS/MS 2.4 0.49 3 2 3 2 97.358 91.795 2;3 1.6059E-63 115806 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 238.73 211.79 314790000 273860000 40932000 0 0 0 0 0 0 0 0 0 0 0 0 0 10955 1629 9988 93008;93009;93010;93011;93012 74310;74311;74312;74313 74313 4 EEIILTPIEVAIEDMQK Unmodified 1970.0282 0.028195171 3933 Q96N67 DOCK7 Dedicator of cytokinesis protein 7 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 101.99 95.57 2;3 0.00018832 120468 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.646 58.363 12695000 3968300 8727000 0 0 0 0 0 0 0 0 0 0 0 0 0 10956 3933 9989 93013;93014 74314;74315 74315 2 EEILAQAK Unmodified 900.49165 0.49164694 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 2 1 1 27.757 27.966 2 0.0067962 30015 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 96.51 59.535 369140000 0 0 0 29534000 33306000 36250000 30841000 27927000 23284000 33453000 35033000 48771000 35499000 4580400 30663000 10957 1356 9990 93015;93016;93017;93018;93019;93020;93021;93022;93023;93024;93025;93026;93027 74316;74317;74318;74319;74320;74321;74322;74323;74324;74325 74317 10 EEILENWNMFVGSQATNYGEDLTK Oxidation (M) 2803.2647 0.26469006 2515 Q15293 RCN1 Reticulocalbin-1 yes yes 0 1 0 By MS/MS By MS/MS 2.5 0.5 3 3 3 3 93.462 88.274 2;3 1.7613E-122 111535 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 175.28 166.43 139000000 50361000 88639000 0 0 0 0 0 0 0 0 0 0 0 0 0 10958 2515 9991 93028;93029;93030;93031;93032;93033 74326;74327;74328;74329;74330 74327 4137 4 EEILENWNMFVGSQATNYGEDLTK Unmodified 2787.2698 0.26977544 2515 Q15293 RCN1 Reticulocalbin-1 yes yes 0 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 1 3 96.397 91.163 2;3 5.3693E-186 114377 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 286.34 267.09 152020000 43128000 108890000 0 0 0 0 0 0 0 0 0 0 0 0 0 10959 2515 9991 93034;93035;93036;93037 74331;74332;74333;74334 74332 4 EEILSSSDICQK Unmodified 1407.6552 0.65515981 1739 P54278 PMS2 Mismatch repair endonuclease PMS2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 48.91 48.935 2 0.00035322 54034 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 81.525 56.388 88620000 0 0 0 0 9212900 18156000 6388400 24384000 0 22912000 0 0 0 7567300 0 10960 1739 9992 93038;93039;93040;93041;93042;93043 74335;74336;74337 74337 3 EEINELNR Unmodified 1015.4934 0.49343786 81 CON__Q6NT21;CON__P78385;P78385;A6NCN2 KRT83;KRT87P Keratin, type II cuticular Hb3;Putative keratin-87 protein no no 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 27.31 27.735 2 0.0048958 29583 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 108.92 27.141 + 41576000 0 0 0 0 0 0 0 34475000 0 0 0 0 0 0 7101000 10961 81 9993 93044;93045 74338;74339 74339 2 EEINIACIEAK Unmodified 1288.6333 0.63330216 4859 Q9UBT7 CTNNAL1 Alpha-catulin yes yes 0 0 0 By MS/MS 2 0 1 1 72.645 67.1 2 0.0025266 84911 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.97 79.613 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10962 4859 9994 93046 74340 74340 1 EEIPVQEK Unmodified 970.49713 0.49712625 3746 Q96B01 RAD51AP1 RAD51-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.487 27.684 2 0.0042848 29572 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 111.65 79.693 460350000 0 0 0 24015000 22582000 30463000 41577000 39466000 34047000 36272000 45659000 46278000 47550000 30897000 61547000 10963 3746 9995 93047;93048;93049;93050;93051;93052;93053;93054;93055;93056;93057;93058 74341;74342;74343;74344;74345;74346;74347;74348;74349;74350;74351;74352 74349 7 EEIQENEEAVK Unmodified 1316.6096 0.60958983 4739 Q9NYB0 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 25.125 24.576 2 0.00027424 26016 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 90.906 53.347 57062000 4534800 2835400 0 0 2888800 4367200 3598500 2998200 5371600 4203300 4547000 4544900 3784500 4594900 8793100 10964 4739 9996 93059;93060;93061;93062;93063;93064;93065;93066;93067;93068;93069;93070;93071 74353;74354;74355;74356;74357;74358;74359;74360;74361;74362 74361 10 EEIQETQTPTHSR Unmodified 1554.7274 0.72741355 4250 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.499 16.678 3 0.0084112 15224 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.56 29.584 68449000 0 0 0 5776600 4345800 4957100 5172500 3657000 2670000 7214800 5262600 9386400 5564900 5869800 8571000 10965 4250 9997 93072;93073;93074;93075;93076;93077;93078;93079;93080;93081;93082;93083 74363;74364;74365 74364 3 EEIQETQTPTHSRK Unmodified 1682.8224 0.82237657 4250 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.15 11.264 3 0.00020527 10324 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 66.004 49.435 29423000 0 0 0 2110900 1541600 3353800 1807000 1817400 1955300 3097600 0 4317500 3176500 2070100 4175400 10966 4250 9998 93084;93085;93086;93087;93088;93089;93090;93091;93092;93093;93094 74366;74367;74368;74369;74370;74371;74372;74373;74374 74373 9 EEIQSSISGVTAAYNR Unmodified 1723.8377 0.83769228 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 2 2 1 1 2 2 2 65.368 65.428 2;3 8.4697E-85 74819 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 190.46 123.77 1037900000 0 0 0 73300000 67414000 100280000 70165000 84493000 53460000 105050000 83451000 111370000 79926000 63462000 145480000 10967 1518 9999 93095;93096;93097;93098;93099;93100;93101;93102;93103;93104;93105;93106;93107;93108;93109;93110;93111;93112;93113;93114;93115;93116 74375;74376;74377;74378;74379;74380;74381;74382;74383;74384;74385;74386;74387;74388;74389;74390;74391;74392;74393;74394;74395;74396 74377 22 EEIRIDATTVFVDPYEEADAQIAQERK Unmodified 3135.536 0.53603754 2274 Q13356 PPIL2 Peptidyl-prolyl cis-trans isomerase-like 2 yes yes 0 0 2 By MS/MS 2 0 1 1 90.271 82.141 4 1.1537E-15 106722 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.752 72.493 10148000 10148000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10968 2274 10000 93117 74397;74398 74397 2 EEISATQIIVCTPEK Unmodified 1716.8604 0.86040156 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.69 3.47 2 2 9 2 2 1 1 1 1 1 1 1 1 1 74.438 72.607 2 6.5856E-27 84560 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 131.37 105.33 236470000 20795000 149130000 0 0 7414400 11821000 4573600 7488700 10606000 14933000 0 0 9711500 0 0 10969 528 10001 93118;93119;93120;93121;93122;93123;93124;93125;93126;93127;93128;93129;93130 74399;74400;74401;74402;74403;74404;74405;74406;74407;74408;74409;74410;74411;74412 74409 12 EEISDDNARLPCFNGR Unmodified 1891.8483 0.84827374 198 O14641 DVL2 Segment polarity protein dishevelled homolog DVL-2 yes yes 0 0 1 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 60.509 60.402 3 0.01169 68189 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 32.815 29.625 21199000 0 0 0 2240400 2955300 0 0 0 0 0 0 0 0 6468100 9535200 10970 198 10002 93131;93132;93133;93134 74413;74414 74413 2 EEISEAEPGGGSLGDGRPPEESAHEMMEEEEEIPK Unmodified 3780.6255 0.62545877 1014 P15170 GSPT1 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A yes yes 0 0 1 By MS/MS 2 0 1 1 79.175 71.044 4 0.0069181 93318 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 23.891 14.748 22733000 22733000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10971 1014 10003 93135 74415 74415 1 EEISEAEPGGGSLGDGRPPEESAHEMMEEEEEIPKPK Unmodified 4005.7732 0.77318564 1014 P15170 GSPT1 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A yes yes 0 0 2 By MS/MS By MS/MS 2.25 0.433 3 1 2 2 76.877 72.488 4;5 1.6411E-42 92226 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.713 83.842 383880000 327570000 0 56310000 0 0 0 0 0 0 0 0 0 0 0 0 10972 1014 10004 93136;93137;93138;93139 74416;74417;74418;74419 74417 4 EEISEAEPGGGSLGDGRPPEESAHEMMEEEEEIPKPK 2 Oxidation (M) 4037.763 0.76301488 1014 P15170 GSPT1 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A yes yes 0 2 2 By MS/MS 2 0 1 1 65.019 56.731 4 7.2156E-12 76166 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.693 47.529 12559000 12559000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10973 1014 10004 93140 74420 74420 1403;1404 1 EEISEAEPGGGSLGDGRPPEESAHEMMEEEEEIPKPK Oxidation (M) 4021.7681 0.76810026 1014 P15170 GSPT1 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A yes yes 0 1 2 By MS/MS 2 0 2 2 72.382 64.174 5 5.9785E-30 87836 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.207 67.432 116980000 116980000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10974 1014 10004 93141;93142 74421;74422 74422 1403;1404 2 EEISGSGTQPGGAK Unmodified 1316.6208 0.62082322 3768 Q96C00 ZBTB9 Zinc finger and BTB domain-containing protein 9 yes yes 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.369 14.531 2 4.2402E-08 13691 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 96.015 62.218 168840000 0 0 0 10470000 11547000 13184000 9722600 14690000 8825400 17222000 17967000 19181000 16101000 11967000 17967000 10975 3768 10005 93143;93144;93145;93146;93147;93148;93149;93150;93151;93152;93153;93154 74423 74423 1 EEITGTLRK Unmodified 1045.5768 0.57677356 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 23.396 22.792 2 0.017054 23927 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 101.6 56.519 176120000 0 39702000 29938000 3747000 2027800 10481000 4079800 3089000 4634600 10370000 13342000 15750000 11099000 9644600 18214000 10976 5187 10006 93155;93156;93157;93158;93159;93160;93161;93162;93163;93164;93165;93166;93167;93168;93169 74424;74425;74426;74427;74428 74424 3 EEITKEEEREK Unmodified 1418.6889 0.68890278 2786 Q5T8P6 RBM26 RNA-binding protein 26 yes yes 0 0 2 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 7.9934 8.1035 3 0.00085233 6507 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 112.83 99.399 145840000 0 0 0 13282000 13085000 4343700 10533000 9272700 8335000 15089000 0 27821000 19154000 13691000 11231000 10977 2786 10007 93170;93171;93172;93173;93174;93175;93176;93177;93178;93179;93180 74429;74430;74431;74432;74433;74434;74435 74434 4 EEIVDKYDLFVGSQATDFGEALVRHDEF Unmodified 3228.5251 0.5251385 376 O43852 CALU Calumenin yes yes 0 0 2 By MS/MS 2.67 0.471 1 2 3 97.144 92.097 3;4 7.2071E-146 115668 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 162.71 145.91 724170000 724170000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10978 376 10008 93181;93182;93183 74436;74437;74438 74438 3 EEIVHQLPSNKPEELENNVDQILK Unmodified 2814.44 0.43995231 5162 Q9Y3D8 AK6 Adenylate kinase isoenzyme 6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 5 1 2 2 83.49 78.97 3;4 6.8345E-69 99193 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.93 128.39 144380000 9709000 110020000 24646000 0 0 0 0 0 0 0 0 0 0 0 0 10979 5162 10009 93184;93185;93186;93187;93188 74439;74440;74441;74442;74443;74444 74439 6 EEIVICDR Unmodified 1032.491 0.49099502 4609 Q9NRR5 UBQLN4 Ubiquilin-4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 40.704 40.837 2 0.013906 45768 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 71.342 46.711 26182000 0 0 0 0 1282000 4542000 0 0 3957400 4077800 3439700 0 5248700 3634700 0 10980 4609 10010 93189;93190;93191;93192;93193;93194;93195 74445;74446 74445 2 EEIVQFFSGLEIVPNGITLPVDPEGK Unmodified 2826.4691 0.46912717 1692 P52597 HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.22 0.416 7 2 3 4 2 100.87 96.171 3 1.6832E-13 120471 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.31 64.836 438250000 174890000 258300000 5048700 0 0 0 0 0 0 0 0 0 0 0 0 10981 1692 10011 93196;93197;93198;93199;93200;93201;93202;93203;93204 74447;74448;74449;74450;74451;74452;74453;74454;74455 74454 8 EEKEESDDEAAVEEEEEEK Unmodified 2251.8976 0.89757075 1002 P14625 HSP90B1 Endoplasmin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 31.229 30.554 3 8.4863E-91 37523 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 146.88 142.02 178930000 37522000 38745000 0 7127300 5040900 6885500 6265200 0 4626700 10454000 12294000 18566000 8463000 8025300 14916000 10982 1002 10012 93205;93206;93207;93208;93209;93210;93211;93212;93213;93214;93215;93216;93217 74456;74457;74458;74459;74460;74461;74462;74463;74464;74465;74466;74467;74468;74469 74460 14 EELADQVLTLK Unmodified 1257.6816 0.68163256 2816 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 76.684 75.654 2 2.0763E-07 86998 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 145.72 118.42 1403000000 13294000 910270000 0 17219000 21185000 31547000 32615000 36670000 30475000 44555000 44087000 56508000 52957000 37014000 74651000 10983 2816 10013 93218;93219;93220;93221;93222;93223;93224;93225;93226;93227;93228;93229;93230;93231;93232 74470;74471;74472;74473;74474;74475;74476;74477;74478;74479;74480;74481;74482;74483;74484;74485 74475 16 EELAEAEIIK Unmodified 1143.6023 0.60231961 4672 Q9NVM9 ASUN Protein asunder homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 59.075 59.192 2 0.0099821 67513 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 56.81 25.05 44242000 0 0 0 0 2959400 5259900 0 0 6147800 8528100 0 0 6171600 7641200 7534100 10984 4672 10014 93233;93234;93235;93236;93237;93238;93239 74486 74486 1 EELAEALK Unmodified 901.47566 0.47566253 1332 P33991 MCM4 DNA replication licensing factor MCM4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 47.537 39.823 2 0.030735 47004 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 89.142 52.441 49270000 49270000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10985 1332 10015 93240;93241;93242;93243 74487;74488;74489;74490 74487 4 EELALLDGSNVVFK Unmodified 1532.8086 0.80862399 264 O15212 PFDN6 Prefoldin subunit 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.15 3.86 7 3 10 1 6 3 1 1 1 1 1 1 1 1 1 1 88.487 86.552 2;3 5.2042E-19 107965 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 159.09 132.64 1758700000 92355000 1531600000 35330000 0 2627100 3306700 3611200 3482100 3324800 10259000 14072000 12968000 0 10635000 35072000 10986 264 10016 93244;93245;93246;93247;93248;93249;93250;93251;93252;93253;93254;93255;93256;93257;93258;93259;93260;93261;93262;93263 74491;74492;74493;74494;74495;74496;74497;74498;74499;74500;74501;74502;74503;74504;74505;74506;74507;74508;74509;74510 74495 17 EELAPYPK Unmodified 945.48075 0.48074791 435 O60828 PQBP1 Polyglutamine-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 37.201 37.31 2 0.04356 41269 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 76.847 53.827 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10987 435 10017 93264;93265 74511;74512 74511 2 EELAQSQHAQEQEFVQK Unmodified 2027.9548 0.95484731 4365 Q9H2G2 SLK STE20-like serine/threonine-protein kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 7 3.69 1 1 3 2 1 1 1 39.808 37.751 3 3.2084E-05 46394 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 88.385 62.561 75268000 0 62944000 0 2458500 0 5954200 3911200 0 0 0 0 0 0 0 0 10988 4365 10018 93266;93267;93268;93269;93270 74513;74514;74515;74516;74517 74515 5 EELAQYQK Unmodified 1007.4924 0.49237523 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 21.627 21.919 2 2.1327E-05 26561 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 159.19 61.596 131630000 0 0 0 7991900 0 0 10515000 7370800 0 17986000 20048000 17792000 10407000 13577000 25947000 10989 5071 10019 93271;93272;93273;93274;93275;93276;93277;93278;93279;93280;93281;93282;93283 74518;74519;74520;74521;74522;74523;74524;74525;74526;74527;74528 74521 10 EELAYLK Unmodified 864.45928 0.45928418 56;84;68 CON__P02533;P02533;CON__Q04695;Q04695;CON__P08727;P08727 KRT14;KRT17;KRT19 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 17;Keratin, type I cytoskeletal 19 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 46.146 45.736 2 0.023371 51899 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 88.734 10.986 + 5367700000 0 201820000 0 1105300000 332110000 357250000 0 544130000 196540000 522790000 480590000 367580000 1004800000 254780000 0 10990 56;84;68 10020 93284;93285;93286;93287;93288;93289;93290;93291;93292;93293;93294 74529;74530;74531;74532;74533;74534;74535 74529 7 EELAYLR Unmodified 892.46543 0.46543219 70 CON__P08779;P08779 KRT16 Keratin, type I cytoskeletal 16 no no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 48.485 48.688 2 0.027575 54626 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 77.374 16.586 + 201220000 0 0 0 36589000 0 7151800 16266000 17702000 7938000 0 0 18208000 84196000 0 13167000 10991 70 10021 93295;93296;93297;93298;93299;93300;93301;93302 74536;74537 74537 2 EELAYLRK Unmodified 1020.5604 0.56039521 70 CON__P08779;P08779 KRT16 Keratin, type I cytoskeletal 16 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 35.67 35.565 2 0.00039315 38111 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 177.71 140.55 + 1839100000 0 0 8058400 201460000 44332000 36314000 79809000 171280000 48323000 156540000 68462000 91985000 813390000 80612000 38526000 10992 70 10022 93303;93304;93305;93306;93307;93308;93309;93310;93311;93312;93313;93314;93315 74538;74539;74540;74541;74542;74543;74544;74545;74546;74547;74548;74549;74550 74546 6 EELDFQK Unmodified 907.42871 0.42871234 757 P02545 LMNA Prelamin-A/C;Lamin-A/C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 36.955 35.85 2 0.011376 45663 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.24 78.5 2132500000 96389000 1383900000 6191100 60445000 20988000 44870000 37984000 37283000 24209000 53370000 65157000 68056000 46927000 66811000 120010000 10993 757 10023 93316;93317;93318;93319;93320;93321;93322;93323;93324;93325;93326;93327;93328;93329;93330;93331 74551;74552;74553;74554;74555;74556;74557 74554 3 EELDRGCRECK Unmodified 1450.6293 0.62929619 2612 Q16543 CDC37 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed yes yes 0 0 2 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 8.6456 5.5601 3 1.188E-06 9659 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 125.75 87.344 154670000 31440000 5677700 117550000 0 0 0 0 0 0 0 0 0 0 0 0 10994 2612 10024 93332;93333;93334 74558;74559 74558 1 EELDSLMTDETIANVPILILGNK Oxidation (M) 2543.304 0.30403568 5274 Q9Y6B6 SAR1B GTP-binding protein SAR1b yes yes 0 1 0 By MS/MS 3 0 1 1 98.448 95.097 3 0.00037545 114096 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 49.559 35.828 13564000 0 13564000 0 0 0 0 0 0 0 0 0 0 0 0 0 10995 5274 10025 93335 74560 74560 6679 1 EELDSLMTDETIANVPILILGNK Unmodified 2527.3091 0.30912106 5274 Q9Y6B6 SAR1B GTP-binding protein SAR1b yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 100.42 95.753 3 0.0001162 119367 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.621 56.366 50835000 11702000 36978000 2155400 0 0 0 0 0 0 0 0 0 0 0 0 10996 5274 10025 93336;93337;93338;93339 74561;74562;74563 74562 3 EELDVVEESHYIQQR Unmodified 1872.8854 0.88537076 2653 Q2NKX8 ERCC6L DNA excision repair protein ERCC-6-like yes yes 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 65.212 65.311 3 0.003826 74805 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 41.542 35.51 12905000 0 0 0 0 0 3877400 0 0 0 5872300 0 0 0 3155300 0 10997 2653 10026 93340;93341;93342 74564 74564 1 EELEAEK Unmodified 846.39708 0.39707786 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 12.469 8.8323 2 0.038776 11961 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.784 38.322 39480000 20515000 18965000 0 0 0 0 0 0 0 0 0 0 0 0 0 10998 965 10027 93343;93344 74565 74565 1 EELEEAR Unmodified 874.40323 0.40322587 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 12.966 13.121 2 0.023384 11852 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 88.029 9.4133 162500000 0 0 0 10406000 8356500 16259000 9489400 10221000 12118000 0 21355000 22931000 18395000 13765000 19205000 10999 2102 10028 93345;93346;93347;93348;93349;93350;93351;93352;93353;93354;93355 74566;74567;74568;74569;74570 74567 5 EELEEARDIAR Unmodified 1329.6525 0.6524577 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 3 2 2 2 2 2 2 2 2 2 2 1 37.009 37.14 2;3 1.3485E-05 40986 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 130.94 65.635 4592300000 0 0 0 240850000 210160000 458090000 221810000 302660000 345260000 376130000 439690000 773900000 473160000 334340000 416220000 11000 2102 10029 93356;93357;93358;93359;93360;93361;93362;93363;93364;93365;93366;93367;93368;93369;93370;93371;93372;93373;93374;93375;93376;93377;93378;93379 74571;74572;74573;74574;74575;74576;74577;74578;74579;74580;74581;74582;74583;74584;74585;74586 74583 11 EELEEARDIARR Unmodified 1485.7536 0.75356872 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 34.911 34.928 3 0.0082853 37479 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 71.555 21.271 55115000 0 0 0 4376900 3470800 0 6159000 4382300 11777000 0 0 0 18432000 6517400 0 11001 2102 10030 93380;93381;93382;93383;93384;93385;93386 74587 74587 1 EELEEDHK Unmodified 1027.4458 0.44581896 3598 Q8WY36 BBX HMG box transcription factor BBX yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 7.5112 4.2105 2 0.0060513 6341 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.68 87.208 20222000 0 20222000 0 0 0 0 0 0 0 0 0 0 0 0 0 11002 3598 10031 93387;93388 74588;74589 74588 2 EELEEICK Unmodified 1048.4747 0.47467625 2475 Q15020 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 9 2.65 1 7 1 1 1 1 1 1 1 1 35.26 34.74 2 0.014218 43316 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.19 77.415 64125000 0 32825000 0 1948500 1570000 0 0 1528100 0 4476400 0 6764300 10108000 4905100 0 11003 2475 10032 93389;93390;93391;93392;93393;93394;93395;93396 74590;74591;74592 74590 3 EELEEIRQR Unmodified 1200.6099 0.6098646 1596 P49756 RBM25 RNA-binding protein 25 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 27.555 27.752 2;3 1.1625E-21 29657 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 198.65 91.071 2332400000 0 0 0 118730000 119000000 164610000 212060000 166340000 179490000 208210000 260500000 237030000 188030000 193610000 284800000 11004 1596 10033 93397;93398;93399;93400;93401;93402;93403;93404;93405;93406;93407;93408;93409;93410;93411;93412;93413;93414;93415;93416;93417;93418;93419;93420 74593;74594;74595;74596;74597;74598;74599;74600;74601;74602;74603;74604;74605;74606;74607;74608;74609;74610;74611;74612;74613;74614;74615;74616;74617;74618 74605 12 EELEEVIK Unmodified 987.51244 0.51244197 1228 P28066 PSMA5 Proteasome subunit alpha type-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 55.26 49.628 2 0.0096686 61340 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 113.89 77.333 4419800000 303590000 4098800000 17431000 0 0 0 0 0 0 0 0 0 0 0 0 11005 1228 10034 93421;93422;93423;93424;93425 74619;74620;74621;74622;74623;74624;74625 74622 7 EELEHPGVEHFKEEDK Unmodified 1950.8959 0.89593544 3631 Q92576 PHF3 PHD finger protein 3 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 33.27 33.51 4 0.032176 36781 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 24.784 14.445 95574000 0 0 0 5743100 0 5680600 2464000 4312400 5134600 4280900 8241000 13350000 28878000 5070500 12419000 11006 3631 10035 93426;93427;93428;93429;93430;93431;93432;93433;93434;93435;93436 74626 74626 1 EELELMAK Unmodified 961.47903 0.47903335 2817 Q5VU43 PDE4DIP Myomegalin yes yes 0 0 0 By MS/MS 2 0 1 1 56.792 50.97 2 0.026252 65743 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.469 36.554 21895000 0 21895000 0 0 0 0 0 0 0 0 0 0 0 0 0 11007 2817 10036 93437 74627 74627 1 EELEPRVFREVTVK Unmodified 1729.9363 0.93628412 1533 P48147 PREP Prolyl endopeptidase yes yes 0 0 2 By MS/MS 2 0 1 1 75.118 66.987 4 0.010753 88350 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 39.424 26.306 31729000 31729000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11008 1533 10037 93438 74628 74628 1 EELEQASQAHGAR Unmodified 1424.6644 0.66441937 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 1 2 2 2 2 2 2 2 14.857 15.042 2;3 1.5966E-11 14774 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 120.68 91.596 269100000 0 0 0 17222000 11028000 12408000 22203000 12821000 14622000 22005000 32651000 27850000 27479000 28441000 40374000 11009 2459 10038 93439;93440;93441;93442;93443;93444;93445;93446;93447;93448;93449;93450;93451;93452;93453;93454;93455;93456;93457;93458;93459;93460;93461 74629;74630;74631;74632;74633;74634;74635;74636;74637;74638;74639;74640;74641;74642 74632 12 EELEQGSRPAPTLEEEK Unmodified 1940.9327 0.93271488 4430 Q9H788 SH2D4A SH2 domain-containing protein 4A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.58 3.57 4 2 13 1 4 1 1 1 1 1 1 1 1 2 1 1 1 1 41.404 39.718 2;3 8.2485E-182 51055 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 245.03 160.38 462610000 19381000 183830000 8100100 12264000 13711000 22457000 18746000 0 13035000 27802000 36862000 40325000 0 20324000 45770000 11010 4430 10039 93462;93463;93464;93465;93466;93467;93468;93469;93470;93471;93472;93473;93474;93475;93476;93477;93478;93479;93480 74643;74644;74645;74646;74647;74648;74649;74650;74651;74652;74653;74654;74655;74656;74657;74658;74659;74660 74647 18 EELEQREAELQK Unmodified 1500.742 0.74200098 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 6 2 24 2 4 2 2 2 2 2 2 2 2 2 2 2 2 2 32.292 31.238 2;3 7.7033E-15 40313 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 156.58 113.14 844260000 52005000 493940000 13424000 15012000 10893000 17822000 24613000 17432000 17660000 23245000 26743000 48077000 26943000 23896000 32557000 11011 2378 10040 93481;93482;93483;93484;93485;93486;93487;93488;93489;93490;93491;93492;93493;93494;93495;93496;93497;93498;93499;93500;93501;93502;93503;93504;93505;93506;93507;93508;93509;93510;93511;93512 74661;74662;74663;74664;74665;74666;74667;74668;74669;74670;74671;74672;74673;74674;74675;74676;74677;74678;74679;74680;74681;74682;74683;74684 74664 20 EELEQTYHAK Unmodified 1246.583 0.58298115 1111 P20700 LMNB1 Lamin-B1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.13 2 2 14 4 1 1 1 1 1 1 2 2 2 1 1 20.332 19.633 2;3 5.1438E-05 25364 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 186.3 139.22 284070000 0 202380000 0 6134800 4002000 4593100 6678100 8771700 5216400 10961000 13414000 11046000 0 6219700 4652500 11012 1111 10041 93513;93514;93515;93516;93517;93518;93519;93520;93521;93522;93523;93524;93525;93526;93527;93528;93529;93530 74685;74686;74687;74688;74689;74690;74691 74687 4 EELERQAVDQIK Unmodified 1456.7522 0.75217174 1017 P15311 EZR Ezrin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS 6.55 3.83 6 3 11 2 5 2 1 1 1 1 2 1 1 1 2 43.723 41.47 2;3 2.9712E-67 51376 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 192.38 114.05 3170500000 186500000 2831200000 80994000 0 998280 0 4323800 2877100 1700800 0 16624000 9330300 2534500 2001100 31432000 11013 1017 10042 93531;93532;93533;93534;93535;93536;93537;93538;93539;93540;93541;93542;93543;93544;93545;93546;93547;93548;93549;93550 74692;74693;74694;74695;74696;74697;74698;74699;74700;74701;74702;74703;74704 74697 10 EELETGKK Unmodified 932.48148 0.48147619 437 O60841 EIF5B Eukaryotic translation initiation factor 5B yes yes 0 0 1 By matching By MS/MS By matching 2.25 0.433 3 1 1 2 1 6.4779 3.4148 2 0.031417 5200 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.11 54.817 148000000 6155000 139210000 2633100 0 0 0 0 0 0 0 0 0 0 0 0 11014 437 10043 93551;93552;93553;93554 74705;74706 74705 2 EELEVAGER Unmodified 1030.4931 0.49310351 1088 P19419 ELK1 ETS domain-containing protein Elk-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 29.961 30.207 2 0.0069711 31506 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 73.665 32.362 56426000 0 0 0 3580900 0 5598600 3255000 2374100 3302200 4498400 4834800 7173200 7562000 4880600 9366100 11015 1088 10044 93555;93556;93557;93558;93559;93560;93561;93562;93563;93564;93565 74707;74708;74709;74710 74709 4 EELGLILEEK Unmodified 1171.6336 0.63361973 4077 Q99996 AKAP9 A-kinase anchor protein 9 yes yes 0 0 0 By MS/MS 2 0 1 1 82.344 74.213 2 0.046842 97197 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 59.931 26.668 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11016 4077 10045 93566 74711 74711 1 EELHQDCLVLATAK Unmodified 1625.8083 0.80830641 3518 Q8TEQ6 GEMIN5 Gem-associated protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 5.4 3.77 2 1 2 2 1 1 1 58.519 55.757 3 1.3457E-09 72437 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.185 75.236 73274000 0 56533000 5140400 0 0 10253000 0 0 0 0 0 0 0 0 1347400 11017 3518 10046 93567;93568;93569;93570;93571 74712;74713;74714;74715;74716;74717 74714 5 EELIADALPVLADR Unmodified 1523.8195 0.81952302 2346 Q13835 PKP1 Plakophilin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 90.108 90.209 2 6.2665E-14 104729 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 115.18 99.91 32329000 0 0 0 2748700 0 0 1082400 15690000 1984200 1930000 2153200 2145400 2147900 1216300 1231300 11018 2346 10047 93572;93573;93574;93575;93576;93577;93578;93579;93580;93581 74718;74719;74720;74721;74722;74723;74724;74725;74726;74727;74728;74729 74724 12 EELIAELQDCEGLIVR Unmodified 1885.9455 0.94552817 304 O43175 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.5 0.5 4 4 4 2 2 92.528 88.188 2;3 1.6106E-38 111047 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 137.4 124.63 81490000 72320000 4227600 4943000 0 0 0 0 0 0 0 0 0 0 0 0 11019 304 10048 93582;93583;93584;93585;93586;93587;93588;93589 74730;74731;74732;74733;74734;74735;74736;74737 74734 7 EELIAELQDCEGLIVRSATK Unmodified 2273.1573 0.15731186 304 O43175 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.11 0.567 1 6 2 6 2 1 94.227 89.63 3;4 2.0198E-73 111502 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 146.64 138.45 765520000 679150000 75254000 11122000 0 0 0 0 0 0 0 0 0 0 0 0 11020 304 10049 93590;93591;93592;93593;93594;93595;93596;93597;93598 74738;74739;74740;74741;74742;74743;74744;74745;74746;74747;74748 74747 11 EELIAQGLLESEDRPAEDSEDEVLAELRK Unmodified 3282.6103 0.61032469 512 O75528 TADA3 Transcriptional adapter 3 yes yes 0 0 2 By MS/MS 2 0 1 1 93.408 85.278 4 5.699E-22 110473 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.664 74.421 18806000 18806000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11021 512 10050 93599 74749 74749 1 EELIDAIR Unmodified 957.51311 0.51311067 3371 Q8N8S7 ENAH Protein enabled homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 63.195 63.36 2 0.021412 72391 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 61.999 0 50340000 0 0 0 0 2807400 5625600 4393100 0 3432500 5518600 5782300 5533800 4747900 4951900 7547100 11022 3371 10051 93600;93601;93602;93603;93604;93605;93606;93607;93608;93609 74750;74751;74752;74753;74754 74752 5 EELIDAIRQELSK Unmodified 1542.8253 0.82533668 3371 Q8N8S7 ENAH Protein enabled homolog yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 93.679 86.637 3 0.0022599 111903 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.952 44.275 83393000 51310000 32083000 0 0 0 0 0 0 0 0 0 0 0 0 0 11023 3371 10052 93610;93611;93612 74755;74756;74757 74757 3 EELIGIAYNR Unmodified 1176.6139 0.61388734 3735 Q96AC1 FERMT2 Fermitin family homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 67.052 67.218 2 0.0043235 76876 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 73.26 57.719 80580000 0 0 0 0 0 6744100 7421800 14449000 0 16843000 0 15229000 10387000 9505800 0 11024 3735 10053 93613;93614;93615;93616;93617;93618;93619 74758;74759;74760;74761;74762;74763 74759 5 EELINFK Unmodified 891.47018 0.47018322 5254 Q9Y5X3 SNX5 Sorting nexin-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 64.748 58.756 2 0.031292 75415 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.903 15.464 266040000 11499000 247850000 6691500 0 0 0 0 0 0 0 0 0 0 0 0 11025 5254 10054 93620;93621;93622 74764 74764 1 EELIPEK Unmodified 856.4542 0.45419881 4226;2895 Q6N069;Q9BXJ9 NAA16;NAA15 N-alpha-acetyltransferase 16, NatA auxiliary subunit;N-alpha-acetyltransferase 15, NatA auxiliary subunit no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.544 35.726 2 0.017319 39526 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 114.19 60.476 5357200000 0 0 0 29482000 49777000 69094000 263520000 371100000 358260000 888850000 1252400000 2019800000 9581900 11296000 33935000 11026 2895;4226 10055 93623;93624;93625;93626;93627;93628;93629;93630;93631;93632;93633;93634 74765;74766;74767;74768;74769;74770;74771;74772;74773;74774;74775 74772 11 EELIPQLR Unmodified 996.5604 0.56039521 3903 Q96K76 USP47 Ubiquitin carboxyl-terminal hydrolase 47 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 68.534 68.664 2 0.047669 78864 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 47.75 11.564 23919000 0 0 0 0 0 6584500 3956800 0 0 4094900 6847700 0 2435200 0 0 11027 3903 10056 93635;93636;93637;93638;93639 74776 74776 1 EELIRLQNSYQPTNK Unmodified 1831.9428 0.94282606 3041 Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 64.036 58.004 3 1.9541E-13 72101 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 123.76 113.84 42851000 6403700 0 36447000 0 0 0 0 0 0 0 0 0 0 0 0 11028 3041 10057 93640;93641 74777 74777 0 EELLAVGK Unmodified 857.48583 0.48583328 1492 P46013 MKI67 Antigen KI-67 yes no 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.046 45.216 2 0.01982 51097 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 63.306 18.775 267790000 0 0 0 16175000 36470000 18099000 20092000 19919000 17419000 19483000 24574000 27806000 16091000 18457000 33208000 11029 1492 10058 93642;93643;93644;93645;93646;93647;93648;93649;93650;93651;93652;93653 74778;74779 74778 1 EELLDDNNFISDK Unmodified 1550.71 0.71003215 4407 Q9H582 ZNF644 Zinc finger protein 644 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 7 3.69 1 1 3 2 1 1 1 74.567 72.829 2 9.4489E-05 89867 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.283 84.592 50819000 0 37429000 0 3507900 0 0 3692300 0 0 0 0 0 6190000 0 0 11030 4407 10059 93654;93655;93656;93657;93658 74780;74781;74782;74783 74781 3 EELLEYEEK Unmodified 1180.5499 0.54994968 1488 P45974 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.25 3.34 4 2 2 2 3 1 1 1 52.488 48.361 2 2.1199E-38 54568 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 185.55 114.21 1165100000 52655000 1029500000 2306500 0 0 0 0 0 0 0 0 0 0 27694000 53013000 11031 1488 10060 93659;93660;93661;93662;93663;93664;93665;93666 74784;74785;74786;74787;74788;74789;74790;74791;74792;74793;74794;74795 74789 12 EELLFGGK Unmodified 891.47018 0.47018322 1702 P52789 HK2 Hexokinase-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 56.414 56.651 2 0.043986 64338 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 49.058 2.2918 77009000 0 0 0 0 0 8194600 6281800 0 5522300 11395000 12110000 12097000 10709000 10699000 0 11032 1702 10061 93667;93668;93669;93670;93671;93672;93673;93674 74796;74797 74796 2 EELLFMK Oxidation (M) 924.46266 0.462655 814 P05783;CON__H-INV:HIT000015463 KRT18 Keratin, type I cytoskeletal 18 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 56.251 55.007 2 0.015731 62508 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 94.163 69.344 2267900000 43796000 426250000 32014000 94833000 117230000 182310000 132140000 125160000 135170000 169700000 168580000 188130000 185250000 114270000 153070000 11033 814 10062 93675;93676;93677;93678;93679;93680;93681;93682;93683;93684;93685;93686;93687;93688;93689;93690;93691 74798;74799;74800;74801;74802;74803;74804;74805;74806;74807;74808;74809;74810;74811 74798 976 14 EELLFMK Unmodified 908.46774 0.46774038 814 P05783;CON__H-INV:HIT000015463 KRT18 Keratin, type I cytoskeletal 18 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.12 3 13 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 73.635 72.725 2 0.016439 93951 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 118.01 118.01 3765400000 83670000 416290000 29492000 150560000 258090000 275340000 187010000 195090000 167760000 311510000 335810000 377490000 223060000 266960000 487300000 11034 814 10062 93692;93693;93694;93695;93696;93697;93698;93699;93700;93701;93702;93703;93704;93705;93706;93707 74812;74813;74814;74815;74816;74817;74818;74819;74820;74821;74822;74823 74817 12 EELLQVVEAMK Unmodified 1287.6744 0.67443869 631 O95235 KIF20A Kinesin-like protein KIF20A yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 89.772 87.396 2 0.0080271 109110 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.338 62.558 10421000 0 8512600 0 0 0 0 0 0 0 0 0 0 0 0 1908800 11035 631 10063 93708;93709 74824;74825 74824 2 EELMAPTLLPELHLLK Oxidation (M) 1862.0223 0.022321932 4345 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 yes yes 0 1 0 By MS/MS 2 0 1 1 97.431 89.3 3 0.0033731 115316 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.207 38.637 7894200 7894200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11036 4345 10064 93710 74826 74826 5806 1 EELMERLK Unmodified 1046.543 0.54303059 1198;1345 P26038;P35241 MSN;RDX Moesin;Radixin no no 0 0 1 By MS/MS By MS/MS By MS/MS 1.8 0.4 1 4 2 2 1 67.427 65.316 2 2.6762E-28 54004 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 183.26 75.829 271970000 194680000 0 77284000 0 0 0 0 0 0 0 0 0 0 0 0 11037 1198;1345 10065 93711;93712;93713;93714;93715 74827;74828;74829;74830;74831;74832 74828 6 EELMERLK Oxidation (M) 1062.5379 0.53794521 1198;1345 P26038;P35241 MSN;RDX Moesin;Radixin no no 0 1 1 By MS/MS By MS/MS 2 0 3 1 2 27.535 23.64 2 1.2696E-25 29622 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 210.67 108.98 169840000 35945000 0 133900000 0 0 0 0 0 0 0 0 0 0 0 0 11038 1198;1345 10065 93716;93717;93718 74833;74834 74833 1734 1 EELMFFLWAPELAPLK Unmodified 1933.0059 0.0059435859 1822 P60981 DSTN Destrin yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 103.53 99.364 2 0.00059213 103525 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 76.655 71.049 7022300 2649500 4372800 0 0 0 0 0 0 0 0 0 0 0 0 0 11039 1822 10066 93719;93720 74835;74836 74836 1 EELMLRLQDYEEK Oxidation (M) 1710.8135 0.81345137 1017 P15311 EZR Ezrin yes yes 0 1 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 74.912 69.239 3 0.0014779 87871 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.891 55.672 264860000 79003000 185860000 0 0 0 0 0 0 0 0 0 0 0 0 0 11040 1017 10067 93721;93722;93723 74837;74838;74839 74837 1412 2 EELMLRLQDYEEK Unmodified 1694.8185 0.81853675 1017 P15311 EZR Ezrin yes yes 0 0 1 By MS/MS By MS/MS 2.4 0.49 3 2 2 3 80.273 74.934 2;3 4.5194E-13 94076 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 158.53 106.66 501930000 235550000 266380000 0 0 0 0 0 0 0 0 0 0 0 0 0 11041 1017 10067 93724;93725;93726;93727;93728 74840;74841;74842;74843 74840 3 EELMQELSSLE Unmodified 1306.5962 0.59624795 1506 P46736 BRCC3 Lys-63-specific deubiquitinase BRCC36 yes yes 0 0 0 By MS/MS 1.5 0.5 1 1 2 92.614 87.704 2 4.8787E-06 99416 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 125.31 105.53 95510000 0 95510000 0 0 0 0 0 0 0 0 0 0 0 0 0 11042 1506 10068 93729;93730 74844;74845 74845 2 EELMQLLGLSK Unmodified 1259.6795 0.67952407 2664 Q32P41 TRMT5 tRNA (guanine(37)-N1)-methyltransferase yes yes 0 0 0 By MS/MS 2 0 1 1 97.2 92.427 2 0.0015691 114443 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.143 78.903 22996000 0 22996000 0 0 0 0 0 0 0 0 0 0 0 0 0 11043 2664 10069 93731 74846 74846 1 EELNAISGPNEFAEFYNR Unmodified 2098.9596 0.95959833 2202 Q12874 SF3A3 Splicing factor 3A subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 2 2 2 2 2 2 1 2 2 84.831 84.938 2;3 5.3043E-26 98112 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 134.68 127.07 261260000 0 0 0 0 12437000 18405000 8141200 18138000 15366000 36787000 27345000 26977000 5746400 20154000 71768000 11044 2202 10070 93732;93733;93734;93735;93736;93737;93738;93739;93740;93741;93742;93743;93744;93745;93746;93747;93748;93749;93750;93751;93752 74847;74848;74849;74850;74851;74852;74853;74854;74855;74856;74857;74858;74859;74860;74861;74862;74863;74864;74865 74850 19 EELNAISGPNEFAEFYNRLK Unmodified 2340.1386 0.13862533 2202 Q12874 SF3A3 Splicing factor 3A subunit 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 93.482 88.807 3 2.478E-107 111984 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 152.18 147.42 100610000 59829000 39079000 1703000 0 0 0 0 0 0 0 0 0 0 0 0 11045 2202 10071 93753;93754;93755;93756 74866;74867;74868;74869;74870 74869 5 EELNALK Unmodified 815.43888 0.43888309 2661 Q32MZ4 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 28.333 28.046 2 0.022596 34771 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.76 10.804 407300000 0 288700000 0 7167100 0 0 8883800 0 5717400 17244000 22143000 28617000 11761000 17066000 0 11046 2661 10072 93757;93758;93759;93760;93761;93762;93763;93764;93765 74871;74872;74873 74871 3 EELNMIDNFFSEPTTK Unmodified 1913.8717 0.87169453 3463 Q8NI08 NCOA7 Nuclear receptor coactivator 7 yes yes 0 0 0 By MS/MS 2 0 1 1 94.656 89.76 2 1.5576E-10 111399 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.18 121.2 27928000 0 27928000 0 0 0 0 0 0 0 0 0 0 0 0 0 11047 3463 10073 93766 74874;74875 74874 2 EELNSSVAIADTALEDRK Unmodified 1959.9749 0.97491405 3343 Q8N5C6 SRBD1 S1 RNA-binding domain-containing protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 76.127 71.29 3 0.00035243 89051 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.693 48.636 23437000 0 23437000 0 0 0 0 0 0 0 0 0 0 0 0 0 11048 3343 10074 93767 74876 74876 1 EELPHCPAGPK Unmodified 1233.5812 0.58120701 522 O75592 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 18.521 18.736 2 0.039954 17739 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 36.842 19.477 54279000 0 0 0 3510400 3168300 0 3815400 3482100 3295200 4543600 4540700 10964000 4634000 4093500 8231900 11049 522 10075 93768;93769;93770;93771;93772;93773;93774;93775;93776;93777;93778 74877 74877 1 EELPRAVGTQTLSGAGLLK Unmodified 1939.0738 0.07384023 2323 Q13596 SNX1 Sorting nexin-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 81.16 76.023 3 0.018583 96958 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 16.663 11.083 62846000 12081000 26202000 24564000 0 0 0 0 0 0 0 0 0 0 0 0 11050 2323 10076 93779;93780;93781 74878;74879 74879 2 EELPVIPK Unmodified 923.53278 0.53278348 4416 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 60.855 60.118 2 0.020013 68608 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 63.148 47.516 107670000 0 39639000 0 0 5807800 6448800 5566300 0 5374500 9417300 6293500 6892700 7586100 5114700 9531800 11051 4416 10077 93782;93783;93784;93785;93786;93787;93788;93789;93790;93791;93792;93793 74880;74881;74882;74883;74884 74883 5 EELQANGSAPAADK Unmodified 1399.6579 0.657937 1256 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.34 1 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 22.35 21.871 2 1.322E-42 22895 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 160.67 151.35 1027400000 12810000 14606000 0 36924000 27040000 76384000 50430000 41443000 76636000 124300000 168120000 116490000 65231000 92952000 124040000 11052 1256 10078 93794;93795;93796;93797;93798;93799;93800;93801;93802;93803;93804;93805;93806;93807;93808 74885;74886;74887;74888;74889;74890;74891;74892;74893;74894;74895;74896;74897;74898;74899 74896 14 EELQANGSAPAADKEEPAAAGSGAASPSAAEK Unmodified 2981.385 0.38501621 1256 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40.88 40.176 3 3.2553E-230 44835 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 203.38 190.44 1300000000 36956000 86021000 0 52134000 58026000 25600000 70697000 75111000 28846000 162360000 229210000 169590000 91399000 84002000 130010000 11053 1256 10079 93809;93810;93811;93812;93813;93814;93815;93816;93817;93818;93819;93820;93821;93822 74900;74901;74902;74903;74904;74905;74906;74907;74908;74909;74910;74911;74912;74913;74914;74915 74908 16 EELQLSDEQLQK Unmodified 1458.7202 0.72020291 16 A3KMH1 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 54.094 54.242 2 0.00013077 61056 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 86.882 37.166 37763000 0 0 0 0 3987300 4196800 3946000 3550600 3682500 4912000 4428900 9059200 0 0 0 11054 16 10080 93823;93824;93825;93826;93827;93828;93829;93830 74916;74917;74918;74919;74920;74921;74922;74923 74922 8 EELQMSLLK Unmodified 1089.574 0.57399637 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 72.799 72.474 2 0.0033124 83635 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 93.429 13.199 187230000 0 29787000 0 7186700 11453000 0 13468000 18507000 7068800 12256000 16291000 21910000 17353000 13145000 18805000 11055 2556 10081 93831;93832;93833;93834;93835;93836;93837;93838;93839;93840;93841;93842 74924;74925;74926;74927;74928;74929;74930;74931;74932;74933;74934;74935;74936 74933 13 EELQMSLLK Oxidation (M) 1105.5689 0.56891099 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 15 2 2 2 2 2 1 2 1 1 51.882 52.065 2 0.006118 58917 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 67.169 11.048 106320000 0 0 0 0 10464000 0 14749000 14735000 9147300 0 11022000 12069000 20523000 6036300 7578700 11056 2556 10081 93843;93844;93845;93846;93847;93848;93849;93850;93851;93852;93853;93854;93855;93856;93857 74937;74938 74937 4194 2 EELQSGVDAANSAAQQYQR Unmodified 2063.9508 0.95082456 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 54.962 55.093 2;3 2.3788E-83 62446 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 218.5 198.03 2854000000 0 0 0 252170000 195030000 230280000 383100000 189830000 165410000 222680000 245080000 283420000 187770000 187390000 311840000 11057 1518 10082 93858;93859;93860;93861;93862;93863;93864;93865;93866;93867;93868;93869;93870;93871;93872;93873;93874;93875;93876;93877;93878;93879;93880;93881 74939;74940;74941;74942;74943;74944;74945;74946;74947;74948;74949;74950;74951;74952;74953;74954;74955;74956;74957 74953 19 EELQSGVDAANSAAQQYQRR Unmodified 2220.0519 0.051935589 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 53.58 53.677 3 1.144E-09 60722 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 75.97 70.878 26320000 0 0 0 0 4996300 0 0 0 0 14696000 0 0 0 0 6627500 11058 1518 10083 93882;93883;93884;93885;93886;93887 74958;74959;74960;74961;74962 74958 5 EELQSQVELLNSFEK Unmodified 1791.8891 0.88905915 1243 P29144 TPP2 Tripeptidyl-peptidase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.29 2.76 5 1 1 1 3 2 1 86.638 82.965 2;3 6.1398E-66 103368 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 227.57 207.91 624250000 17106000 594740000 6978900 0 0 0 0 0 0 0 0 0 0 0 5422300 11059 1243 10084 93888;93889;93890;93891;93892;93893;93894 74963;74964;74965;74966;74967;74968;74969 74963 6 EELRGGGGDMAEPSEAGDAPPDDGPPGELGPDGPDGPEEK Oxidation (M) 3915.6501 0.65009361 868 P08621 SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa yes yes 0 1 1 By MS/MS 10 0 1 1 60.511 61.011 3 4.1621E-17 69248 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 41.287 39.665 10992000 0 0 0 0 0 0 0 0 0 0 0 10992000 0 0 0 11060 868 10085 93895 74970 74970 1112 1 EELRIQGVPK Unmodified 1167.6612 0.66117189 3178 Q86W50 METTL16 Methyltransferase-like protein 16 yes yes 0 0 1 By MS/MS 2 0 1 1 53.129 47.337 3 0.047005 61347 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 35.511 27.024 31706000 0 31706000 0 0 0 0 0 0 0 0 0 0 0 0 0 11061 3178 10086 93896 74971 74971 1 EELRLEEAK Unmodified 1115.5823 0.58225287 3208 Q86YP4 GATAD2A Transcriptional repressor p66-alpha yes yes 0 0 1 By MS/MS 3 0 1 1 35.275 30.733 2 0.032867 38343 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 114.5 44.673 4792600 0 4792600 0 0 0 0 0 0 0 0 0 0 0 0 0 11062 3208 10087 93897 74972 74972 0 EELRLLGGLDHIVDK Unmodified 1705.9363 0.93628412 3107 Q7Z5K2 WAPAL Wings apart-like protein homolog yes yes 0 0 1 By MS/MS By MS/MS 2.67 0.471 1 2 2 1 86.987 81.999 3 0.00081272 104937 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.885 48.604 55844000 53363000 2481300 0 0 0 0 0 0 0 0 0 0 0 0 0 11063 3107 10088 93898;93899;93900 74973;74974 74974 2 EELRPVREDFEAK Unmodified 1616.8158 0.81583463 4581 Q9NQY0 BIN3 Bridging integrator 3 yes yes 0 0 2 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 40.879 41.136 3 0.048756 44687 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.944 18.531 88565000 0 0 0 0 4026600 8069400 0 6080000 7490100 7620600 9684900 14453000 13368000 0 17773000 11064 4581 10089 93901;93902;93903;93904;93905;93906;93907;93908;93909 74975 74975 1 EELSAALEK Unmodified 988.50769 0.50769094 1996 P82094 TMF1 TATA element modulatory factor yes yes 0 0 0 By MS/MS 2 0 1 1 45.025 39.704 2 0.025715 51675 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.64 30.731 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11065 1996 10090 93910 74976 74976 1 EELSEEGYLAK Unmodified 1266.598 0.59796251 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 48.812 47.693 2 4.9416E-09 60633 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 154.49 112.84 425070000 12009000 133840000 0 20068000 20263000 20304000 17691000 14390000 17373000 26489000 35986000 26324000 25249000 21073000 34015000 11066 1201 10091 93911;93912;93913;93914;93915;93916;93917;93918;93919;93920;93921;93922;93923;93924;93925 74977;74978;74979;74980;74981;74982;74983;74984;74985;74986;74987;74988;74989;74990;74991;74992;74993 74982 16 EELSEVETK Unmodified 1062.5081 0.50808487 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 25.975 26.359 2 0.01448 28016 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 58.23 23.299 27806000 0 0 0 0 0 4034600 0 0 1570600 0 4364000 5415400 0 4664500 7757000 11067 2495 10092 93926;93927;93928;93929;93930;93931 74994;74995 74995 1 EELSEVPK Unmodified 929.47058 0.47057715 2708 Q53SF7 COBLL1 Cordon-bleu protein-like 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 30.531 30.711 2 0.0091721 33737 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 83.753 42.525 49970000 0 0 0 0 4089900 7281100 6625600 0 0 7448100 6850100 0 0 5911200 11764000 11068 2708 10093 93932;93933;93934;93935;93936;93937;93938 74996;74997;74998;74999 74996 4 EELTLEGIR Unmodified 1058.5608 0.56078914 1816 P60842 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 65.094 64.91 2 0.01612 74204 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 56.81 24.455 82477000 0 0 0 13372000 8684100 30967000 13772000 15682000 0 0 0 0 0 0 0 11069 1816 10094 93939;93940;93941;93942;93943 75000;75001;75002;75003;75004 75002 5 EELVAAVEDVRK Unmodified 1356.7249 0.72489436 1340;1200 P35221;P26232 CTNNA1;CTNNA2 Catenin alpha-1;Catenin alpha-2 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.76 2.85 3 1 21 1 1 2 2 2 2 2 1 2 1 2 1 2 2 2 59.133 58.386 2;3 0.0001774 66619 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 114.4 86.193 628370000 37737000 60108000 62937000 28421000 28531000 45643000 42552000 26526000 29180000 32175000 54579000 34173000 36013000 44159000 65640000 11070 1340;1200 10095 93944;93945;93946;93947;93948;93949;93950;93951;93952;93953;93954;93955;93956;93957;93958;93959;93960;93961;93962;93963;93964;93965;93966;93967;93968 75005;75006;75007;75008;75009;75010;75011;75012;75013;75014;75015;75016;75017;75018;75019;75020;75021 75019 10 EELVAEQALK Unmodified 1128.6027 0.60265396 5280 Q9Y6E2 BZW2 Basic leucine zipper and W2 domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.81 2.85 1 2 1 23 1 3 2 2 2 2 2 2 2 2 2 2 2 1 52.074 51.46 2 2.9594E-06 60646 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 148.52 0 1294400000 17201000 487560000 0 55070000 35443000 81498000 40255000 63802000 55458000 95510000 51102000 99761000 73043000 62501000 76217000 11071 5280 10096 93969;93970;93971;93972;93973;93974;93975;93976;93977;93978;93979;93980;93981;93982;93983;93984;93985;93986;93987;93988;93989;93990;93991;93992;93993;93994;93995 75022;75023;75024;75025;75026;75027;75028;75029;75030;75031;75032;75033;75034;75035;75036;75037;75038;75039;75040;75041;75042;75043;75044;75045;75046;75047;75048 75028 26 EELVEESQTK Unmodified 1190.5667 0.56666238 2161 Q08623 HDHD1 Pseudouridine-5'-phosphatase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 22.361 22.744 2 0.0035335 23382 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 78.113 65.285 29813000 0 0 0 0 0 2632700 0 0 0 2607700 4896000 5630800 0 3690100 10356000 11072 2161 10097 93996;93997;93998;93999;94000;94001;94002 75049;75050;75051;75052;75053;75054;75055 75053 7 EELVLELQTAK Unmodified 1271.6973 0.69728262 632 O95239 KIF4A Chromosome-associated kinesin KIF4A yes yes 0 0 0 By MS/MS 2 0 1 1 79.569 74.845 2 0.0019172 93230 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.88 78.804 22177000 0 22177000 0 0 0 0 0 0 0 0 0 0 0 0 0 11073 632 10098 94003 75056 75056 1 EELVPSEEDFQGITPGAQGPSSR Unmodified 2429.1347 0.13466217 463 O75150 RNF40 E3 ubiquitin-protein ligase BRE1B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 2 2 2 2 1 2 2 1 1 1 1 78.558 78.647 2;3 2.0928E-10 90788 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 92.063 87.433 142660000 0 0 0 0 7572900 10351000 10950000 11493000 4350100 17145000 15560000 15319000 13070000 12469000 24385000 11074 463 10099 94004;94005;94006;94007;94008;94009;94010;94011;94012;94013;94014;94015;94016;94017;94018;94019;94020 75057;75058;75059;75060;75061;75062;75063;75064;75065;75066;75067;75068 75064 12 EELYLQR Unmodified 949.4869 0.48689592 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 40.731 40.894 2 0.026956 45689 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 77.944 45.015 148640000 0 0 0 7135300 8409500 20820000 10510000 7213300 11416000 19625000 18540000 18849000 0 1130900 24994000 11075 4634 10100 94021;94022;94023;94024;94025;94026;94027;94028;94029;94030;94031 75069;75070;75071;75072;75073 75071 5 EELYLQRVAELDK Unmodified 1604.841 0.84098675 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 0 1 By MS/MS By MS/MS 3 0 2 1 1 79.022 75.436 3 0.014462 90611 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 43.03 21.481 10834000 1347100 9487400 0 0 0 0 0 0 0 0 0 0 0 0 0 11076 4634 10101 94032;94033 75074 75074 0 EELYMPPLVIK Unmodified 1330.7207 0.7206606 4773 Q9NZM1 MYOF Myoferlin yes yes 0 0 0 By MS/MS 2 0 1 1 92.879 87.968 2 0.010512 109274 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.498 59.36 10319000 0 10319000 0 0 0 0 0 0 0 0 0 0 0 0 0 11077 4773 10102 94034 75075 75075 1 EELYQNLTR Unmodified 1164.5775 0.57750184 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 49.555 49.765 2 0.0051146 55116 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 83.168 62.934 181500000 0 0 0 13754000 0 15245000 13158000 14038000 6669700 15863000 20082000 19542000 0 23886000 39261000 11078 2344 10103 94035;94036;94037;94038;94039;94040;94041;94042;94043;94044 75076;75077;75078;75079;75080;75081;75082;75083;75084;75085;75086 75084 10 EEMDFPQLMK Oxidation (M) 1282.5574 0.55736002 278 O15371 EIF3D Eukaryotic translation initiation factor 3 subunit D yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.64 1.67 1 21 1 2 2 2 2 2 2 1 2 1 2 1 2 67.601 67.393 2 0.0036756 77813 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 68.383 62.279 289120000 0 203840000 0 2211100 5703200 11295000 6450500 1712800 7132100 3772500 16522000 5445400 3238800 5993700 15796000 11079 278 10104 94045;94046;94047;94048;94049;94050;94051;94052;94053;94054;94055;94056;94057;94058;94059;94060;94061;94062;94063;94064;94065;94066 75087;75088;75089;75090;75091;75092;75093;75094;75095;75096;75097;75098;75099;75100;75101;75102;75103 75097 365;366 17 EEMDFPQLMK Unmodified 1266.5624 0.5624454 278 O15371 EIF3D Eukaryotic translation initiation factor 3 subunit D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 79.48 78.847 2 0.0026343 97492 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.51 89.986 369960000 0 307810000 0 1495700 2120300 4582100 0 4691000 2352200 0 6339000 7391400 3945200 8802500 20431000 11080 278 10104 94067;94068;94069;94070;94071;94072;94073;94074;94075;94076;94077;94078;94079 75104;75105;75106;75107;75108;75109;75110 75106 7 EEMDFPQLMK 2 Oxidation (M) 1298.5523 0.55227464 278 O15371 EIF3D Eukaryotic translation initiation factor 3 subunit D yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 52.035 51.612 2 0.0050407 58265 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 50.04 29.52 142710000 0 58341000 0 0 0 0 7634500 0 9380900 12343000 13118000 16425000 0 12528000 12943000 11081 278 10104 94080;94081;94082;94083;94084;94085;94086;94087 75111;75112;75113;75114;75115;75116;75117 75115 365;366 6 EEMDRAQAELNALK Oxidation (M) 1632.7777 0.77773456 4063 Q99816 TSG101 Tumor susceptibility gene 101 protein yes yes 0 1 1 By MS/MS 2.5 0.5 1 1 2 52.313 46.969 3 0.010142 61147 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 45.28 31.196 36305000 0 36305000 0 0 0 0 0 0 0 0 0 0 0 0 0 11082 4063 10105 94088;94089 75118 75118 5559 1 EEMDRAQAELNALK Unmodified 1616.7828 0.78281994 4063 Q99816 TSG101 Tumor susceptibility gene 101 protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.12 3.26 1 1 6 2 1 1 1 1 1 1 59.549 58.353 3 0.0010458 75016 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.042 41.615 104200000 0 60203000 0 4488300 0 0 3731800 0 0 7815800 6804000 6103200 0 0 15054000 11083 4063 10105 94090;94091;94092;94093;94094;94095;94096;94097 75119;75120 75119 2 EEMEAFPEK Oxidation (M) 1124.4696 0.46959087 2733 Q5JS54 PSMG4 Proteasome assembly chaperone 4 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 29.781 24.748 2 0.012186 32810 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.452 74.112 36179000 8264700 27914000 0 0 0 0 0 0 0 0 0 0 0 0 0 11084 2733 10106 94098;94099 75121 75121 4373 1 EEMEAFPEK Unmodified 1108.4747 0.47467625 2733 Q5JS54 PSMG4 Proteasome assembly chaperone 4 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 41.446 40.677 2 0.0052023 44491 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.438 68.669 121470000 0 96725000 0 0 0 2355400 0 0 1930300 0 4862200 0 0 0 15596000 11085 2733 10106 94100;94101;94102;94103;94104;94105 75122;75123;75124;75125 75123 4 EEMEAFPEKF Oxidation (M) 1271.538 0.53800479 2733 Q5JS54 PSMG4 Proteasome assembly chaperone 4 yes yes 0 1 1 By MS/MS 2 0 1 1 67.196 61.28 2 0.047697 78285 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 55.567 52.589 22984000 0 22984000 0 0 0 0 0 0 0 0 0 0 0 0 0 11086 2733 10107 94106 75126 75126 4373 0 EEMIHNLQ Unmodified 1012.4648 0.46478027 130 O00232 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 3 9 1 1 1 1 1 1 1 1 1 1 1 1 38.8 37.763 2 0.011329 41966 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 120.49 115.5 1083500000 21160000 700720000 2071700 0 0 20483000 0 22820000 7022200 65692000 96537000 70890000 21494000 17640000 37003000 11087 130 10108 94107;94108;94109;94110;94111;94112;94113;94114;94115;94116;94117;94118 75127;75128;75129;75130;75131;75132;75133 75132 3 EEMIHNLQ Oxidation (M) 1028.4597 0.45969489 130 O00232 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 3 9 1 1 1 1 1 1 1 1 1 1 1 1 23.813 22.876 2 0.021203 29167 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.32 66.907 281360000 5752800 143650000 2545700 9325000 10713000 12194000 4484300 3591100 0 23280000 25473000 32556000 0 7797900 0 11088 130 10108 94119;94120;94121;94122;94123;94124;94125;94126;94127;94128;94129;94130 75134;75135 75135 1 EEMNRLSTDK Unmodified 1221.566 0.56595087 1122 P21283 ATP6V1C1 V-type proton ATPase subunit C 1 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 18.695 15.095 2 0.019742 19734 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.409 43.063 17846000 0 17846000 0 0 0 0 0 0 0 0 0 0 0 0 0 11089 1122 10109 94131;94132 75136 75136 1 EEMQSNVEVVHTYR Oxidation (M) 1735.7835 0.78354822 3632 Q92597 NDRG1 Protein NDRG1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 33.793 34.171 3 0.000678 36950 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 50.897 40.7 35883000 0 0 0 0 0 9696200 0 0 0 0 11604000 8063800 0 6519300 0 11090 3632 10110 94133;94134;94135;94136 75137;75138;75139 75139 5130 3 EEMQSNVEVVHTYR Unmodified 1719.7886 0.7886336 3632 Q92597 NDRG1 Protein NDRG1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 43.707 43.881 3 0.00022943 48039 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.669 67.285 111180000 0 0 0 0 3739600 14513000 10665000 8377000 0 18977000 11891000 0 0 8548200 34469000 11091 3632 10110 94137;94138;94139;94140;94141;94142;94143;94144 75140;75141;75142;75143;75144;75145 75142 6 EEMSQLTGQNSGDVNVEINVAPGK Oxidation (M) 2531.181 0.18096043 1354 P35527;CON__P35527 KRT9 Keratin, type I cytoskeletal 9 yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.68 3.04 1 2 16 1 1 1 2 2 1 2 2 2 2 2 1 71.537 70.981 2;3 4.1012E-74 80309 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 129.84 122.86 + 232240000 9101300 46702000 9223300 11930000 13079000 0 3060800 28555000 14162000 42091000 29038000 21470000 3829400 0 0 11092 1354 10111 94145;94146;94147;94148;94149;94150;94151;94152;94153;94154;94155;94156;94157;94158;94159;94160;94161;94162;94163 75146;75147;75148;75149;75150;75151;75152;75153;75154;75155;75156;75157;75158;75159;75160;75161;75162;75163 75148 2057 18 EEMSQLTGQNSGDVNVEINVAPGK Unmodified 2515.186 0.18604581 1354 P35527;CON__P35527 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 0 By MS/MS By MS/MS 2.2 0.4 4 1 4 1 77.277 71.077 2;3 1.7036E-38 92848 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 157.38 145.94 + 88748000 74861000 0 13887000 0 0 0 0 0 0 0 0 0 0 0 0 11093 1354 10111 94164;94165;94166;94167;94168 75164;75165;75166;75167;75168;75169;75170 75169 7 EEMTSALATMRVDYEQIK Unmodified 2114.0024 0.0023911255 1560 P49137 MAPKAPK2 MAP kinase-activated protein kinase 2 yes yes 0 0 1 By MS/MS 2 0 1 1 85.588 80.814 3 7.324E-05 100454 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.275 54.869 29616000 0 29616000 0 0 0 0 0 0 0 0 0 0 0 0 0 11094 1560 10112 94169 75171 75171 1 EENAEPVSK Unmodified 1001.4666 0.46655441 5037 Q9UNN5 FAF1 FAS-associated factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 7.6032 7.7463 2 0.01094 4759 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 63.565 17.549 22939000 0 0 0 0 1181800 4361600 2176900 1969000 2412500 0 4485000 1442400 0 1452400 3457200 11095 5037 10113 94170;94171;94172;94173;94174;94175;94176;94177;94178 75172;75173;75174;75175;75176;75177 75175 6 EENAEQAESTEVSSSGISISK Unmodified 2180.9921 0.99208025 4979 Q9UKY1 ZHX1 Zinc fingers and homeoboxes protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 54.435 54.556 2 3.3159E-62 61245 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 171.91 166.73 82042000 0 0 0 5173900 7024000 6098500 7643900 5574500 5152100 7603200 10277000 10692000 0 6409800 10393000 11096 4979 10114 94179;94180;94181;94182;94183;94184;94185;94186;94187;94188;94189;94190 75178;75179;75180;75181;75182;75183;75184;75185;75186;75187;75188;75189 75181 12 EENAEQQALAAK Unmodified 1300.6259 0.62590859 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 28.373 28.468 2 1.9162E-05 30689 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 116.52 103.69 42309000 0 0 0 2759900 3028300 4994600 2689500 3640800 2734200 8054100 0 8248300 6159200 0 0 11097 5071 10115 94191;94192;94193;94194;94195;94196;94197;94198;94199;94200;94201 75190;75191;75192;75193;75194;75195;75196;75197;75198 75191 9 EENEAESDVK Unmodified 1148.4833 0.48332668 1582 P49642 PRIM1 DNA primase small subunit yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 8.1103 8.2161 2 0.008766 6574 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 59.245 33.686 12745000 0 0 0 1500100 641730 1293400 1211300 0 1626200 0 2470500 0 0 1438800 2563200 11098 1582 10116 94202;94203;94204;94205;94206;94207;94208;94209 75199;75200;75201;75202 75199 4 EENEGFVK Unmodified 950.43453 0.434526 391 O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 22.005 20.902 2 0.0059277 25974 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.17 65.481 157950000 21601000 107120000 0 2383200 2769700 5879300 3992900 0 3317000 0 10889000 0 0 0 0 11099 391 10117 94210;94211;94212;94213;94214;94215;94216;94217 75203;75204 75203 2 EENFFGPK Unmodified 966.4447 0.44469675 4768 Q9NZI8 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 50.742 45.903 2 0.022565 59561 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.377 52.636 63716000 0 61897000 1819200 0 0 0 0 0 0 0 0 0 0 0 0 11100 4768 10118 94218;94219 75205 75205 1 EENGTMGVSK Oxidation (M) 1066.4601 0.46008882 3465 Q8NI27 THOC2 THO complex subunit 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 6.0464 6.1394 2 0.002342 4094 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.064 61.907 13754000 0 0 0 2135100 0 1526300 1331400 1163600 1530000 0 0 1702800 1806700 2557800 0 11101 3465 10119 94220;94221;94222;94223;94224;94225;94226;94227 75206;75207 75207 4996 2 EENGVLVLNDANFDNFVADK Unmodified 2222.0491 0.049141622 982 P13667 PDIA4 Protein disulfide-isomerase A4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.33 3.93 6 1 8 1 4 2 1 1 1 1 1 1 1 1 90.69 88.684 2;3 1.0395E-111 110128 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 228.19 228.19 642500000 27700000 574100000 13425000 0 1195000 0 0 1407600 988890 3958600 5213600 2427200 0 1763500 10314000 11102 982 10120 94228;94229;94230;94231;94232;94233;94234;94235;94236;94237;94238;94239;94240;94241;94242 75208;75209;75210;75211;75212;75213;75214;75215;75216;75217;75218 75209 10 EENIEDATEK Unmodified 1176.5146 0.51462681 2003 P82970 HMGN5 High mobility group nucleosome-binding domain-containing protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 5.75 4.26 1 1 2 2 1 1 50.044 50.346 2 7.8985E-06 92842 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 142.04 68.427 41641000 26856000 0 0 0 0 0 0 0 0 0 0 0 0 0 14785000 11103 2003 10121 94243;94244;94245;94246 75219;75220;75221;75222 75220 4 EENIQTLLINPNIATVQTSQGLADK Unmodified 2709.4185 0.41848859 1224 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.69 3.47 2 2 9 4 1 1 1 1 1 1 1 1 1 90.859 89.682 2;3 0 110558 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 313.76 293.53 700130000 0 664460000 0 0 1444700 963460 0 2057800 1101300 8274600 5859400 3860000 0 1763900 10347000 11104 1224 10122 94247;94248;94249;94250;94251;94252;94253;94254;94255;94256;94257;94258;94259 75223;75224;75225;75226;75227;75228;75229 75223 6 EENISCDNLVLEINSLK Unmodified 1988.9725 0.97247121 2241 Q13144 EIF2B5 Translation initiation factor eIF-2B subunit epsilon yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 91.914 87.852 2 3.0209E-58 109166 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 159.52 143.43 44901000 0 44901000 0 0 0 0 0 0 0 0 0 0 0 0 0 11105 2241 10123 94260;94261 75230;75231 75230 2 EENLADWYSQVITK Unmodified 1694.8152 0.81516593 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS 2.2 0.4 4 1 3 2 90.792 87.108 2;3 0.00041352 108102 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 53.491 48.196 381640000 0 378260000 3382400 0 0 0 0 0 0 0 0 0 0 0 0 11106 848 10124 94262;94263;94264;94265;94266 75232;75233;75234 75232 3 EENLLNVPK Unmodified 1054.5659 0.56587452 2975 Q6UUV7 CRTC3 CREB-regulated transcription coactivator 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.43 2.06 1 13 1 1 1 1 1 1 2 1 1 1 1 1 1 55.975 55.678 2 0.0036636 63014 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 110.81 91.171 328370000 0 54407000 0 14360000 14052000 22847000 20047000 20724000 21529000 28930000 27567000 22724000 21879000 23137000 36165000 11107 2975 10125 94267;94268;94269;94270;94271;94272;94273;94274;94275;94276;94277;94278;94279;94280 75235;75236;75237;75238;75239;75240;75241;75242;75243;75244 75242 5 EENLLNVPKPLPK Unmodified 1489.8504 0.85042922 2975 Q6UUV7 CRTC3 CREB-regulated transcription coactivator 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 67.935 68.019 3 0.018162 77968 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 35.774 27.798 124350000 0 0 0 10489000 11986000 0 13115000 10638000 0 11405000 19855000 17292000 12072000 8064200 9431300 11108 2975 10126 94281;94282;94283;94284;94285;94286;94287;94288;94289;94290 75245;75246;75247;75248;75249;75250 75245 5 EENMDTSNTSISK Oxidation (M) 1470.6144 0.61441721 2684 Q4G0J3 LARP7 La-related protein 7 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 11.538 11.632 2 6.7561E-07 10740 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 93.258 77.367 42244000 0 0 0 3015700 2473800 2734700 3596900 3011300 3974200 4733400 0 7328400 6571900 4803300 0 11109 2684 10127 94291;94292;94293;94294;94295;94296;94297;94298;94299;94300 75251;75252;75253;75254;75255;75256;75257;75258;75259;75260 75251 4341 10 EENMDTSNTSISK Unmodified 1454.6195 0.61950259 2684 Q4G0J3 LARP7 La-related protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.108 22.316 2 1.1849E-12 22814 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 152.07 140.9 123960000 0 0 0 5473200 3870500 5499000 4425700 6758300 6694700 15011000 16785000 16748000 13289000 10560000 18843000 11110 2684 10127 94301;94302;94303;94304;94305;94306;94307;94308;94309;94310;94311;94312 75261;75262;75263;75264;75265;75266;75267;75268;75269;75270;75271;75272 75266 12 EENMQQAREEEER Unmodified 1676.706 0.70602618 4652 Q9NUQ3 TXLNG Gamma-taxilin yes yes 0 0 1 By MS/MS By matching By matching By matching By matching By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 14.841 15.061 3 0.001511 13951 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.891 55.852 21733000 0 0 0 0 1552500 0 0 1600500 1124200 2180200 4583200 0 0 5018700 5673400 11111 4652 10128 94313;94314;94315;94316;94317;94318;94319;94320 75273;75274 75273 2 EENNDHLDDFK Unmodified 1374.5688 0.56878765 1420 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 yes yes 0 0 0 By MS/MS 3 0 1 1 33.11 28.631 3 0.030748 35798 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 53.237 48.721 14523000 0 14523000 0 0 0 0 0 0 0 0 0 0 0 0 0 11112 1420 10129 94321 75275 75275 0 EENNHLQEELER Unmodified 1538.6961 0.69611342 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.819 35.001 3 0.00045625 38603 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 59.155 55.92 217790000 0 0 0 12108000 8784200 16938000 16849000 16029000 13081000 19560000 17814000 29136000 26964000 17350000 23179000 11113 2556 10130 94322;94323;94324;94325;94326;94327;94328;94329;94330;94331;94332;94333 75276;75277;75278;75279;75280;75281;75282;75283;75284;75285;75286;75287 75284 11 EENPESDGEPVVEDGTSVK Unmodified 2015.8807 0.88073889 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 44.471 44.962 2 1.0657E-30 49414 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 132.86 122.53 54965000 0 0 0 0 0 0 0 0 0 8518300 13062000 10185000 12123000 0 11078000 11114 2291 10131 94334;94335;94336;94337;94338;94339;94340;94341 75288;75289;75290;75291;75292;75293;75294;75295 75290 8 EENRRPLTEPPVR Unmodified 1591.8431 0.84305243 598 O94888 UBXN7 UBX domain-containing protein 7 yes yes 0 0 2 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.34 28.535 4 0.0033096 30325 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 43.382 32.277 177210000 0 0 0 6963600 6079800 17510000 9428300 8233300 7066000 14202000 28479000 22131000 13522000 17228000 26364000 11115 598 10132 94342;94343;94344;94345;94346;94347;94348;94349;94350;94351;94352;94353 75296;75297;75298;75299;75300 75297 3 EENRRPPSGDNAR Unmodified 1496.708 0.70801551 2397 Q14241 TCEB3 Transcription elongation factor B polypeptide 3 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 5.7938 5.9075 3 1.2416E-08 3572 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 116.24 65.884 137540000 0 0 0 12737000 6883500 11527000 8613800 0 8580300 12448000 10709000 12685000 14284000 12948000 26124000 11116 2397 10133 94354;94355;94356;94357;94358;94359;94360;94361;94362;94363;94364 75301;75302;75303;75304;75305;75306;75307;75308;75309;75310;75311 75303 9 EENSRDLEELPK Unmodified 1457.6998 0.69980182 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 39.83 38.854 3 0.0001104 48266 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 117.86 107.13 398290000 32880000 136440000 0 12247000 13063000 20816000 10513000 10059000 11159000 23154000 24847000 31491000 19223000 20693000 31703000 11117 3443 10134 94365;94366;94367;94368;94369;94370;94371;94372;94373;94374;94375;94376;94377;94378;94379 75312;75313;75314;75315;75316;75317;75318;75319;75320;75321;75322;75323;75324;75325 75318 6 EENSTEEQALEDQNAK Unmodified 1833.7864 0.78644457 4582 Q9NQZ2 UTP3 Something about silencing protein 10 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 30.566 30.707 2 1.0106E-21 33278 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 117.79 104.44 26409000 0 0 0 2205800 2304500 3054700 2520200 2112100 0 0 3228700 0 4621000 3019100 3342700 11118 4582 10135 94380;94381;94382;94383;94384;94385;94386;94387;94388;94389 75326;75327;75328;75329;75330;75331 75330 5 EENTTAVEEIGRTEMGNK Unmodified 2006.9215 0.92149827 4618 Q9NS73 MBIP MAP3K12-binding inhibitory protein 1 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 54.424 54.537 3 0.010463 61751 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 30.418 24.514 11095000 0 0 0 0 0 3883100 0 0 0 7212300 0 0 0 0 0 11119 4618 10136 94390;94391 75332;75333 75333 2 EENVDIEGLDPAPSVSALTPHAGTGPVNPPAR Unmodified 3206.5844 0.58438472 2592 Q15906 VPS72 Vacuolar protein sorting-associated protein 72 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 82.979 83.146 3 1.5712E-126 96035 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 132.76 126.46 39735000 0 0 0 0 0 0 0 6056400 5849100 14224000 0 0 0 0 13606000 11120 2592 10137 94392;94393;94394;94395 75334;75335;75336;75337;75338 75335 5 EENVGLHQTLDQTLNELNCI Unmodified 2339.1063 0.10633893 1957 P67936 TPM4 Tropomyosin alpha-4 chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 6 2 2 2 94.404 89.241 2;3 1.6181E-11 109639 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 114.31 98.765 834210000 19640000 779100000 35468000 0 0 0 0 0 0 0 0 0 0 0 0 11121 1957 10138 94396;94397;94398;94399;94400;94401 75339;75340;75341;75342 75342 2 EEPAAAGSGAASPSAAEK Unmodified 1599.7376 0.73764389 1256 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22.105 21.479 2 1.4731E-29 21539 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 127.71 102.94 1163600000 27741000 20940000 1766300 52107000 34761000 83685000 59135000 60247000 73946000 111790000 241460000 121450000 69717000 72457000 132350000 11122 1256 10139 94402;94403;94404;94405;94406;94407;94408;94409;94410;94411;94412;94413;94414;94415;94416 75343;75344;75345;75346;75347;75348;75349;75350;75351;75352;75353;75354;75355;75356;75357;75358 75354 16 EEPADFPVEQPEEN Unmodified 1628.6842 0.68421133 2721 Q5BKZ1 ZNF326 DBIRD complex subunit ZNF326 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 64.211 64.252 2 0.00081165 73695 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 63.426 56.893 62753000 0 0 0 4221000 5378700 0 6235300 0 0 8812900 9335400 0 7093700 8276500 13400000 11123 2721 10140 94417;94418;94419;94420;94421;94422;94423;94424 75359;75360;75361;75362;75363;75364 75362 5 EEPFFPPPEEFVFIHAVPVEERVR Unmodified 2895.4596 0.45956554 2645 Q1KMD3 HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes yes 0 0 1 By MS/MS 2 0 1 1 98.688 90.557 4 0.0025306 116858 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 37.209 34.926 18865000 18865000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11124 2645 10141 94425 75365 75365 1 EEPGLPPQPQPPPPPLPQPGDK Unmodified 2311.1848 0.18484724 5203 Q9Y4H2 IRS2 Insulin receptor substrate 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 77.078 77.061 3 0.04431 88453 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 18.245 14.958 26236000 0 0 0 2377700 2390500 2575900 3573500 2222200 0 3530600 0 0 1943100 7622000 0 11125 5203 10142 94426;94427;94428;94429;94430;94431;94432;94433 75366 75366 1 EEPGSDSGTTAVVALIR Unmodified 1700.8581 0.85809337 275 O15355 PPM1G Protein phosphatase 1G yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 2 1 1 1 1 1 1 1 1 1 1 79.607 79.045 2;3 4.4374E-36 90983 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 127.17 98.447 384370000 0 34554000 0 14874000 16465000 22781000 17173000 21407000 20749000 0 41286000 65654000 27532000 24608000 77281000 11126 275 10143 94434;94435;94436;94437;94438;94439;94440;94441;94442;94443;94444;94445;94446;94447 75367;75368;75369;75370;75371;75372;75373;75374;75375;75376;75377 75370 11 EEPGSDSGTTAVVALIRGK Unmodified 1885.9745 0.97452012 275 O15355 PPM1G Protein phosphatase 1G yes yes 0 0 1 By MS/MS 3 0 1 1 81.24 77.94 3 0.014635 93513 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 32.366 22.309 3569000 0 3569000 0 0 0 0 0 0 0 0 0 0 0 0 0 11127 275 10144 94448 75378 75378 1 EEPIPCTAHWHFGQ Unmodified 1707.7464 0.74637486 1032 P16083 NQO2 Ribosyldihydronicotinamide dehydrogenase [quinone] yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 5.2 3.92 3 2 1 1 1 1 1 75.156 72.119 3 0.00038552 91467 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.548 60.443 251820000 70870000 102200000 68378000 0 0 0 0 0 0 0 0 0 0 1137300 9235700 11128 1032 10145 94449;94450;94451;94452;94453 75379;75380;75381;75382;75383;75384 75379 6 EEPIPQEPQWSLPSK Unmodified 1763.873 0.87301516 2667 Q3KQU3 MAP7D1 MAP7 domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 78.192 77.293 2 6.674E-05 94748 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.97 102.6 38925000 0 24638000 0 0 3169700 0 2795900 3535300 4785500 0 0 0 0 0 0 11129 2667 10146 94454;94455;94456;94457;94458;94459 75385;75386;75387;75388;75389 75387 5 EEPITSLGK Unmodified 972.51278 0.51277632 4430 Q9H788 SH2D4A SH2 domain-containing protein 4A yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 43.466 37.459 2 0.020033 48631 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.738 17.571 190830000 12351000 178480000 0 0 0 0 0 0 0 0 0 0 0 0 0 11130 4430 10147 94460;94461 75390 75390 1 EEPKEEEMTEEEK Unmodified 1635.6822 0.68216242 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 20.129 19.006 2;3 3.0229E-40 23643 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 191.53 185.75 603090000 19065000 108320000 0 21832000 28096000 36304000 24755000 32450000 34180000 59305000 35009000 56642000 39312000 56357000 51457000 11131 213 10148 94462;94463;94464;94465;94466;94467;94468;94469;94470;94471;94472;94473;94474;94475;94476;94477;94478 75391;75392;75393;75394;75395;75396;75397;75398;75399;75400;75401;75402;75403;75404;75405;75406;75407;75408;75409 75396 19 EEPKEEEMTEEEK Oxidation (M) 1651.6771 0.67707705 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 8.8442 8.4066 3 3.5241E-13 5823 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 131.08 121.72 145420000 0 25169000 0 7094600 12217000 0 7117100 0 14062000 7440700 17366000 21361000 13443000 9581100 10565000 11132 213 10148 94479;94480;94481;94482;94483;94484;94485;94486;94487;94488;94489;94490 75410;75411;75412;75413;75414;75415;75416;75417;75418;75419;75420;75421;75422 75416 284 11 EEPLHSIISSTESVQGSTSK Unmodified 2115.0332 0.033157207 2210 Q12931 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.17 3.85 2 1 3 2 1 1 1 1 69.749 68.437 3 9.2688E-35 87322 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.615 55.525 54681000 0 21432000 7172100 0 0 11607000 0 0 0 0 0 0 0 5577700 8893100 11133 2210 10149 94491;94492;94493;94494;94495;94496 75423;75424;75425;75426 75424 3 EEPLMSAFASEPRK Unmodified 1590.7712 0.77119262 4211 Q9BWH6 RPAP1 RNA polymerase II-associated protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 71.65 68.367 3 0.013409 84045 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 41.092 36.201 2912100 0 0 2912100 0 0 0 0 0 0 0 0 0 0 0 0 11134 4211 10150 94497 75427 75427 0 EEPLSQITAYCNSCWDTK Unmodified 2200.9405 0.94051915 2838 Q63HN8 RNF213 E3 ubiquitin-protein ligase RNF213 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 82.849 78.853 2 0 97971 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 320.57 316.16 51998000 0 51998000 0 0 0 0 0 0 0 0 0 0 0 0 0 11135 2838 10151 94498;94499 75428 75428 1 EEPPGTFSVIEEERPQDR Unmodified 2113.9916 0.99162674 4947 Q9UJX6 ANAPC2 Anaphase-promoting complex subunit 2 yes yes 0 0 1 By matching By MS/MS By MS/MS 10 0 3 1 1 1 66.165 66.458 3 0.0046464 75212 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 34.422 26.848 21079000 0 0 0 0 0 0 0 0 0 0 0 0 5338400 7163800 8577200 11136 4947 10152 94500;94501;94502 75429 75429 1 EEPPPARSGSGGGSAK Unmodified 1482.7063 0.70628418 4393 Q9H4A3 WNK1 Serine/threonine-protein kinase WNK1 yes yes 0 0 1 By matching By MS/MS 2 0 2 1 1 7.3136 3.9345 3 0.039132 6188 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 20.389 9.8268 19668000 4245900 15422000 0 0 0 0 0 0 0 0 0 0 0 0 0 11137 4393 10153 94503;94504 75430 75430 1 EEPPPLTPPAR Unmodified 1202.6295 0.62953741 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 47.589 47.751 2 0.0070621 54381 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 54.982 38.206 85856000 0 0 0 4805700 3530400 8531100 4363300 0 6874400 7543400 9499600 11793000 8147100 7465500 13302000 11138 4285 10154 94505;94506;94507;94508;94509;94510;94511;94512;94513;94514;94515 75431;75432;75433;75434 75434 4 EEPQTVPEAR Unmodified 1154.5568 0.5567664 1052 P17275 JUNB Transcription factor jun-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching 10 0 8 1 1 1 1 1 1 1 1 23.112 23.152 2 0.035215 24542 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 69.598 49.078 55445000 0 0 0 5307400 5195800 7756100 5764900 4423400 6789700 11499000 0 0 8708300 0 0 11139 1052 10155 94516;94517;94518;94519;94520;94521;94522;94523 75435;75436 75435 1 EEPQVSQSAGK Unmodified 1158.5517 0.55168102 3037 Q76L83 ASXL2 Putative Polycomb group protein ASXL2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 12.57 12.721 2 0.000593 11386 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 80.165 25.616 16314000 0 0 0 0 870930 1879600 1374700 1345800 1237300 1737000 0 1877000 2281900 1338600 2371600 11140 3037 10156 94524;94525;94526;94527;94528;94529;94530;94531;94532;94533 75437;75438;75439;75440;75441;75442;75443;75444;75445 75440 8 EEPSNNVK Unmodified 915.42977 0.42977497 2457 Q14974 KPNB1 Importin subunit beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 1.6 0.49 2 3 2 2 1 46.489 45.942 2 0.012147 100035 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 103.02 59.951 303170000 138570000 152970000 11619000 0 0 0 0 0 0 0 0 0 0 0 0 11141 2457 10157 94534;94535;94536;94537;94538 75446;75447;75448;75449;75450 75450 5 EEPSNPFLAFVEK Unmodified 1505.7402 0.74021007 3061 Q7LBC6 KDM3B Lysine-specific demethylase 3B yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 91.754 91.861 2 0.0010818 106434 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.232 47.173 29890000 0 0 0 0 2098500 2747600 2066700 2164300 2044500 3098200 2496600 3770000 2680700 2392100 4330800 11142 3061 10158 94539;94540;94541;94542;94543;94544;94545;94546;94547;94548;94549 75451;75452;75453;75454 75452 4 EEPVEEAEEEAPEASTAPK Unmodified 2040.9011 0.90113998 4997 Q9ULJ3 ZBTB21 Zinc finger and BTB domain-containing protein 21 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 13 2 2 2 2 1 2 1 1 52.993 52.899 2;3 3.5165E-08 59121 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 98.942 89.655 57736000 0 0 0 8905800 9307300 9695200 8275800 3805000 8552600 3745700 0 0 0 5448400 0 11143 4997 10159 94550;94551;94552;94553;94554;94555;94556;94557;94558;94559;94560;94561;94562 75455;75456;75457;75458;75459;75460 75458 5 EEPVIVTPPTK Unmodified 1208.6653 0.66525421 3256 Q8IX90 SKA3 Spindle and kinetochore-associated protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.828 52.97 2 0.012947 58598 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.699 44.542 109000000 0 0 0 3378400 3287400 8717100 4018500 3670400 8351600 11027000 14430000 13486000 13722000 8592600 16318000 11144 3256 10160 94563;94564;94565;94566;94567;94568;94569;94570;94571;94572;94573;94574 75461;75462;75463;75464;75465 75463 5 EEPVPELLEAEAPEAYPVFEPVPPVPEAAQGDTEDSEGAPPLK Unmodified 4539.1745 0.17446788 3555 Q8WUZ0 BCL7C B-cell CLL/lymphoma 7 protein family member C yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 98.182 92.463 4 9.8226E-16 116547 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.337 44.258 43439000 28193000 15246000 0 0 0 0 0 0 0 0 0 0 0 0 0 11145 3555 10161 94575;94576 75466;75467 75467 2 EEPVPLETQVVEEEEDSGAPPLK Unmodified 2520.2119 0.21190943 4095 Q9BQE9 BCL7B B-cell CLL/lymphoma 7 protein family member B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 6.25 3.77 1 1 2 2 1 1 83.805 81.851 3 2.8127E-30 100706 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.32 101.13 50356000 0 43026000 0 0 0 5426500 1903900 0 0 0 0 0 0 0 0 11146 4095 10162 94577;94578;94579;94580 75468;75469;75470 75469 3 EEPVTADVINPMALR Unmodified 1653.8396 0.83960654 312 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 83.036 83.097 2 3.3102E-06 95316 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 89.548 83.942 57034000 0 0 0 1367100 3515600 3947200 3208600 5720700 3970300 7770700 5584300 6847000 0 5452200 9650400 11147 312 10163 94581;94582;94583;94584;94585;94586;94587;94588;94589;94590;94591 75471;75472;75473;75474;75475;75476;75477;75478;75479;75480;75481 75479 11 EEPVTADVINPMALR Oxidation (M) 1669.8345 0.83452116 312 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.546 76.583 2 8.1445E-06 88439 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 79.693 62.22 123140000 0 0 0 6220000 7216400 10520000 11313000 9102700 15190000 14258000 12458000 16457000 10022000 10383000 0 11148 312 10163 94592;94593;94594;94595;94596;94597;94598;94599;94600;94601;94602 75482;75483;75484;75485;75486;75487;75488 75483 402 7 EEPVTISPFPSLQPLGHNK Unmodified 2089.0844 0.084404917 327 O43426 SYNJ1 Synaptojanin-1 yes yes 0 0 0 By MS/MS 10 0 1 1 83.555 83.655 3 0.023316 96838 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 24.793 15.262 6864400 0 0 0 0 0 0 0 0 0 6864400 0 0 0 0 0 11149 327 10164 94603 75489 75489 1 EEPYFGMGK Unmodified 1056.4586 0.45863226 4282 Q9C0B1 FTO Alpha-ketoglutarate-dependent dioxygenase FTO yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 56.626 51.282 2 0.029807 66028 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.799 61.944 76217000 0 76217000 0 0 0 0 0 0 0 0 0 0 0 0 0 11150 4282 10165 94604;94605 75490 75490 1 EEQEETSAIR Unmodified 1190.5415 0.54151026 593 O94855 SEC24D Protein transport protein Sec24D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 16.972 16.937 2 0.0091269 16920 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 68.224 50.984 2617400 0 0 0 0 0 2617400 0 0 0 0 0 0 0 0 0 11151 593 10166 94606;94607;94608;94609;94610 75491;75492;75493;75494;75495 75491 5 EEQELMEEINEDEPVK Oxidation (M) 1975.8568 0.85683233 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 1 2 2 2 2 2 2 2 2 2 2 59.357 59.494 2 1.5353E-149 68179 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 217.09 210.43 336200000 0 0 0 23504000 13688000 36083000 25721000 23264000 27299000 25634000 30611000 42728000 29070000 28847000 29756000 11152 213 10167 94611;94612;94613;94614;94615;94616;94617;94618;94619;94620;94621;94622;94623;94624;94625;94626;94627;94628;94629;94630;94631;94632;94633 75496;75497;75498;75499;75500;75501;75502;75503;75504;75505;75506;75507;75508;75509;75510;75511;75512;75513;75514;75515 75498 285 19 EEQELMEEINEDEPVK Unmodified 1959.8619 0.8619177 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 2 24 2 2 2 2 2 2 2 2 2 2 2 2 2 74.516 74.205 2;3 1.8852E-84 85176 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 225.13 219.4 288770000 0 60533000 0 8433100 12386000 16740000 9156400 21238000 12635000 23381000 25087000 31168000 14277000 18198000 35540000 11153 213 10167 94634;94635;94636;94637;94638;94639;94640;94641;94642;94643;94644;94645;94646;94647;94648;94649;94650;94651;94652;94653;94654;94655;94656;94657;94658;94659 75516;75517;75518;75519;75520;75521;75522;75523;75524;75525;75526;75527;75528;75529;75530;75531 75522 15 EEQFNMLSSDLEK Oxidation (M) 1584.6978 0.69775291 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 63.97 63.209 2 1.3469E-08 72430 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 108.7 90.638 117310000 0 45350000 0 7671900 0 5594300 7771700 0 4941000 6222700 6460900 10491000 7546500 5101900 10159000 11154 1286 10168 94660;94661;94662;94663;94664;94665;94666;94667;94668;94669;94670;94671;94672;94673 75532;75533;75534;75535;75536;75537;75538;75539;75540;75541;75542;75543;75544;75545;75546 75541 1891 14 EEQFNMLSSDLEK Unmodified 1568.7028 0.70283829 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 75.612 74.709 2 4.7056E-25 92376 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 155.97 122.78 304010000 0 269260000 0 0 7055000 0 0 0 0 5182100 0 0 0 6989800 15525000 11155 1286 10168 94674;94675;94676;94677;94678;94679 75547;75548;75549;75550 75547 4 EEQHQLAVTAYLK Unmodified 1528.7886 0.78855725 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 4 3.46 3 1 1 1 1 1 70.39 66.192 3 0.002658 85564 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.628 47.648 196790000 38884000 132340000 12749000 0 0 0 0 0 0 0 0 0 0 0 12818000 11156 2378 10169 94680;94681;94682;94683 75551;75552;75553 75551 3 EEQIEELK Unmodified 1016.5026 0.50260556 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.289 33.474 2 0.0047077 36610 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 113.41 28.052 139970000 0 0 0 8220600 7826900 14016000 8227200 10822000 15154000 10914000 13157000 10853000 18747000 11706000 10327000 11157 2556 10170 94684;94685;94686;94687;94688;94689;94690;94691;94692;94693;94694;94695 75554;75555;75556;75557;75558;75559;75560;75561;75562;75563 75555 8 EEQLQQILK Unmodified 1127.6186 0.61863837 1676 P51948 MNAT1 CDK-activating kinase assembly factor MAT1 yes yes 0 0 0 By MS/MS 10 0 1 1 60.54 60.732 2 0.0077069 68392 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 71.715 16.165 4516400 0 0 0 0 0 0 0 0 0 0 0 0 0 4516400 0 11158 1676 10171 94696 75564 75564 1 EEQLSSYEDK Unmodified 1226.5303 0.53027687 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 27.41 27.255 2 0.00020032 29213 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 141.48 133.55 147050000 0 7087100 0 5265600 5099800 19364000 8469700 6072100 11400000 13365000 15685000 12138000 13330000 10580000 19192000 11159 3676 10172 94697;94698;94699;94700;94701;94702;94703;94704;94705;94706;94707;94708;94709 75565;75566;75567;75568;75569;75570;75571;75572;75573;75574;75575;75576;75577 75570 13 EEQMDGTVTLK Unmodified 1249.586 0.58601761 2608 Q16531 DDB1 DNA damage-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 40.921 41.099 2 1.9544E-05 44594 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 127.4 109.49 131950000 0 0 0 5099100 4411200 6612700 7418200 7275900 4860500 9262100 17448000 19012000 9381500 14644000 26527000 11160 2608 10173 94710;94711;94712;94713;94714;94715;94716;94717;94718;94719;94720;94721;94722 75578;75579;75580;75581;75582;75583;75584;75585;75586;75587;75588;75589;75590 75582 13 EEQMDGTVTLK Oxidation (M) 1265.5809 0.58093224 2608 Q16531 DDB1 DNA damage-binding protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.22 2.2 1 8 1 1 1 1 1 1 1 1 1 25.824 25.493 2 0.00017082 27309 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 91.584 75.111 96814000 0 2224700 0 0 8784500 0 10357000 0 0 17745000 16207000 18566000 10590000 12340000 0 11161 2608 10173 94723;94724;94725;94726;94727;94728;94729;94730;94731 75591;75592;75593;75594;75595;75596;75597 75591 4250 7 EEQNSSSLLEENK Unmodified 1505.6845 0.68454569 2688 Q4LE39 ARID4B AT-rich interactive domain-containing protein 4B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 32.771 32.912 2 4.8551E-10 34888 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 117.52 76.638 77248000 0 0 0 4960500 6767200 7472900 5586400 7204900 5383100 8603100 0 10180000 0 8784900 12305000 11162 2688 10174 94732;94733;94734;94735;94736;94737;94738;94739;94740;94741 75598;75599;75600;75601;75602;75603;75604;75605;75606 75601 8 EEQPLQEPDSGLR Unmodified 1496.7107 0.71070086 2657 Q2TAM9 TUSC1 Tumor suppressor candidate gene 1 protein yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 45.31 45.706 2 0.010243 50438 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.419 13.645 38876000 0 0 0 0 0 6509700 0 0 0 0 6487900 0 18275000 0 7603400 11163 2657 10175 94742;94743;94744;94745 75607;75608 75607 2 EEQQDDTVYMGK Unmodified 1441.6031 0.60312424 2391 Q14203 DCTN1 Dynactin subunit 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 2 1 1 1 1 30.323 30.507 2 2.4923E-05 32009 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.111 63.637 46484000 0 0 0 1148600 0 4621400 2402000 5201300 0 7483700 6224800 0 0 5932100 13470000 11164 2391 10176 94746;94747;94748;94749;94750;94751;94752;94753;94754;94755 75609;75610;75611;75612;75613;75614;75615 75612 7 EEQQDILSK Unmodified 1088.535 0.53496832 234 O14976 GAK Cyclin-G-associated kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.813 27.013 2 0.0031541 28830 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 92.439 54.881 92957000 0 0 0 6898000 7123800 6579200 7138700 5378100 6232800 8399200 9056400 13103000 8753500 7900900 6393500 11165 234 10177 94756;94757;94758;94759;94760;94761;94762;94763;94764;94765;94766;94767 75616;75617;75618;75619;75620;75621;75622;75623;75624;75625;75626;75627 75622 11 EEQQQLLQK Unmodified 1142.5932 0.5931519 1089 P19447 ERCC3 TFIIH basal transcription factor complex helicase XPB subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 25.377 25.469 2 0.012783 27198 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 60.788 32.57 15470000 0 0 0 3473600 0 2996800 2659500 3698800 0 0 2641600 0 0 0 0 11166 1089 10178 94768;94769;94770;94771;94772;94773;94774 75628;75629;75630;75631;75632;75633 75629 6 EEQRAQQQLNSK Unmodified 1457.7223 0.7222686 4365 Q9H2G2 SLK STE20-like serine/threonine-protein kinase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 3.12 2.62 6 1 1 2 3 2 1 8.459 5.7801 2;3 0.00019649 9667 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 91.855 63.128 173780000 18905000 140270000 4724500 0 0 0 0 0 0 0 0 0 0 0 9879600 11167 4365 10179 94775;94776;94777;94778;94779;94780;94781;94782 75634;75635;75636;75637 75637 4 EEQSGHSGEEVQLCSK Unmodified 1802.7741 0.77410575 3267 Q8IXW5 RPAP2 Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 26.047 21.878 3 0.0042163 27422 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 31.614 23.273 51274000 0 51274000 0 0 0 0 0 0 0 0 0 0 0 0 0 11168 3267 10180 94783;94784 75638;75639;75640 75640 3 EEQSRLEQGLSEHQR Unmodified 1824.8715 0.87145203 2979 Q6UWE0 LRSAM1 E3 ubiquitin-protein ligase LRSAM1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 28.102 28.441 3 2.4473E-08 30787 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 91.207 52.202 33267000 0 0 0 0 0 9354900 0 0 0 0 0 0 8532100 4233900 11146000 11169 2979 10181 94785;94786;94787;94788;94789 75641;75642;75643;75644;75645;75646 75646 6 EEQTPQNK Unmodified 972.45124 0.45123869 719 P00338 LDHA L-lactate dehydrogenase A chain yes yes 0 0 0 By MS/MS By matching 1 0 2 1 1 108.85 111.93 2 0.0024011 92596 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 126.2 89.184 965270000 958340000 6925900 0 0 0 0 0 0 0 0 0 0 0 0 0 11170 719 10182 94790;94791 75647 75647 1 EEQVIQVWNK Unmodified 1271.651 0.65100113 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 61.623 61.646 2 0.0043267 70225 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 73.248 49.218 40420000 0 0 0 3777300 4234400 0 4142500 0 5737800 6544400 7290300 0 0 0 8693400 11171 5216 10183 94792;94793;94794;94795;94796;94797;94798;94799 75648;75649;75650;75651;75652 75652 5 EERADLIAYLK Unmodified 1319.7085 0.70851601 2028 P99999 CYCS Cytochrome c yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 3.67 2.87 3 2 1 2 2 1 1 77.837 74.099 3 0.00028611 93498 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.313 73.816 284280000 65731000 164480000 37903000 0 0 0 0 0 0 0 0 0 0 0 16164000 11172 2028 10184 94800;94801;94802;94803;94804;94805 75653;75654;75655;75656;75657;75658;75659 75653 7 EERDDETDEPKPK Unmodified 1586.706 0.70600941 3255 Q8IX12 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes yes 0 0 2 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.68 3 1 25 1 2 1 2 2 2 2 2 2 2 2 2 3 2 2 6.885 6.5682 3;4 4.3594E-16 5107 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 130.56 125.65 1231800000 56728000 28858000 7216800 54193000 46642000 69080000 74504000 72755000 92696000 114930000 167310000 54377000 101140000 122880000 168540000 11173 3255 10185 94806;94807;94808;94809;94810;94811;94812;94813;94814;94815;94816;94817;94818;94819;94820;94821;94822;94823;94824;94825;94826;94827;94828;94829;94830;94831;94832;94833;94834 75660;75661;75662;75663;75664;75665;75666;75667;75668;75669;75670;75671;75672;75673;75674;75675;75676;75677;75678 75673 14 EEREIRQQLAEK Unmodified 1527.8005 0.80051892 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 2 By MS/MS 2 0 1 1 27.558 22.169 4 0.038195 31361 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 34.386 15.062 18046000 18046000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11174 516 10186 94835 75679 75679 1 EERESESGGLRPNK Unmodified 1586.7649 0.76486169 3846 Q96G25 MED8 Mediator of RNA polymerase II transcription subunit 8 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9.0896 8.7532 3 3.1782E-21 7126 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 115.06 90.773 127620000 5597800 0 9083800 5369300 5720600 4502700 5597800 3410400 5326800 9510700 26220000 17114000 9227000 9023500 11914000 11175 3846 10187 94836;94837;94838;94839;94840;94841;94842;94843;94844;94845;94846;94847;94848;94849 75680;75681;75682;75683;75684;75685;75686 75685 4 EERGEAVDEGEIAENLPEQEILIQSVCETMVPK Oxidation (M) 3756.771 0.77100079 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 1 1 By MS/MS 2 0 1 1 93.585 85.455 3 1.3268E-18 110645 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.848 62.152 12398000 12398000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11176 2392 10188 94850 75687 75687 3899 1 EERGEAVDEGEIAENLPEQEILIQSVCETMVPK Unmodified 3740.7761 0.77608617 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 1 2 96.966 92.604 3;4 2.1579E-79 115584 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 115.74 110.14 72279000 58625000 0 13654000 0 0 0 0 0 0 0 0 0 0 0 0 11177 2392 10188 94851;94852;94853 75688;75689;75690 75688 3 EERGPGVPFQR Unmodified 1270.6418 0.64183343 1530 P47929 LGALS7 Galectin-7 yes yes 0 0 1 By MS/MS By MS/MS By matching 10 0 3 1 1 1 38.394 38.533 3 0.0043604 42503 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 61.958 46.757 96222000 0 0 0 72201000 0 0 0 19895000 0 0 0 4125200 0 0 0 11178 1530 10189 94854;94855;94856 75691;75692 75691 1 EERIDTPPACTEESIATPSEIK Unmodified 2472.169 0.16899876 602 O94913 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.12 2.32 1 7 1 1 2 1 1 1 1 65.302 64.08 3 0.00040331 74154 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 46.353 38.065 18597000 0 4118800 0 0 2509000 6398400 0 0 0 0 5571100 0 0 0 0 11179 602 10190 94857;94858;94859;94860;94861;94862;94863;94864 75693;75694;75695;75696;75697;75698;75699 75698 7 EERLQQQLEK Unmodified 1299.6783 0.67827852 1791 P57081 WDR4 tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4 yes yes 0 0 1 By MS/MS 2 0 1 1 28.526 25.42 3 0.035655 32304 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 66.19 42.964 52684000 0 0 52684000 0 0 0 0 0 0 0 0 0 0 0 0 11180 1791 10191 94865 75700 75700 0 EERPPELPLLSEQLSLDELWDMLGECLK Unmodified 3338.6414 0.64143059 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 1 By MS/MS 2 0 1 1 104.68 96.547 3 4.1511E-22 123977 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.982 83.617 12974000 12974000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11181 3119 10192 94866 75701 75701 1 EERSPQTLAPVGEDAMK Oxidation (M) 1872.8887 0.88874158 3663 Q92797 SYMPK Symplekin yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 43.098 38.655 3 0.005482 50285 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 43.208 31.185 30311000 0 26944000 3366700 0 0 0 0 0 0 0 0 0 0 0 0 11182 3663 10193 94867;94868 75702 75702 5194 1 EERSPQTLAPVGEDAMK Unmodified 1856.8938 0.89382695 3663 Q92797 SYMPK Symplekin yes yes 0 0 1 By MS/MS 2 0 1 1 56.226 50.412 3 0.01352 65069 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 36.637 26.17 45255000 0 45255000 0 0 0 0 0 0 0 0 0 0 0 0 0 11183 3663 10193 94869 75703 75703 1 EERSSQDHVDEEVFK Unmodified 1832.8177 0.81768512 4115 Q9BRS2 RIOK1 Serine/threonine-protein kinase RIO1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 38.043 33.04 3 0.01451 45902 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.237 31.895 10508000 8270500 0 2237300 0 0 0 0 0 0 0 0 0 0 0 0 11184 4115 10194 94870;94871 75704;75705 75704 2 EERSSYLEYQK Unmodified 1430.6678 0.66777341 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 35.343 30.562 3 0.00077259 38009 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 73.781 62.462 165420000 17900000 123610000 23906000 0 0 0 0 0 0 0 0 0 0 0 0 11185 643 10195 94872;94873;94874;94875 75706;75707;75708;75709;75710 75708 5 EERSWEQK Unmodified 1090.5043 0.5043369 2612 Q16543 CDC37 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed yes yes 0 0 1 By matching By MS/MS By MS/MS 2 0 3 1 1 1 12.489 9.3039 2 0.018266 12057 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 170.3 136.29 147810000 25058000 70610000 52147000 0 0 0 0 0 0 0 0 0 0 0 0 11186 2612 10196 94876;94877;94878 75711 75711 1 EERVNEESHLTEK Unmodified 1598.7536 0.7536283 4680 Q9NVR5 DNAAF2 Protein kintoun yes yes 0 0 1 By MS/MS 2 0 1 1 19.563 16.948 3 0.0013689 21417 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 69.92 47.865 15081000 0 0 15081000 0 0 0 0 0 0 0 0 0 0 0 0 11187 4680 10197 94879 75712;75713 75712 2 EESAASGGAAYTK Unmodified 1240.5572 0.55716033 5122 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 13.321 13.476 2 0.00072651 12123 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.913 68.421 172960000 0 0 0 7419100 9814300 10776000 8960600 9287600 8172800 13034000 13900000 22982000 21919000 18132000 28558000 11188 5122 10198 94880;94881;94882;94883;94884;94885;94886;94887;94888;94889;94890;94891;94892 75714;75715;75716;75717;75718;75719;75720;75721;75722;75723;75724;75725 75718 12 EESAEELQAAEHPDEVEDPK Unmodified 2250.9764 0.97643019 127 O00193 SMAP Small acidic protein yes yes 0 0 0 By MS/MS 10 0 1 1 48.212 48.935 3 0.03011 54155 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 23.196 18.928 28288000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28288000 11189 127 10199 94893 75726 75726 1 EESDDEAAVEEEEEEK Unmodified 1865.7174 0.71742154 1002 P14625 HSP90B1 Endoplasmin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.91 2.75 3 19 1 1 1 1 2 2 1 1 1 2 2 2 1 2 2 33.351 32.885 2;3 5.8205E-298 36267 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 252.69 246.71 1222700000 44996000 45389000 2563100 53881000 44951000 107110000 69579000 63836000 48603000 115340000 135600000 124270000 70378000 105330000 190880000 11190 1002 10200 94894;94895;94896;94897;94898;94899;94900;94901;94902;94903;94904;94905;94906;94907;94908;94909;94910;94911;94912;94913;94914;94915 75727;75728;75729;75730;75731;75732;75733;75734;75735;75736;75737;75738;75739;75740;75741;75742;75743;75744;75745;75746;75747 75738 20 EESDVPQWSSQFLQK Unmodified 1806.8424 0.84244331 3842 Q96FZ2 HMCES Embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 81.585 77.585 2 4.0996E-06 97954 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 133.42 125.35 123950000 0 114490000 9459600 0 0 0 0 0 0 0 0 0 0 0 0 11191 3842 10201 94916;94917;94918 75748;75749 75748 2 EESGKPGAHVTVK Unmodified 1337.6939 0.69392858 1141 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 9.4731 9.6061 3 0.00020987 8015 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 62.528 50.26 722250000 0 0 0 25294000 20618000 13384000 35526000 26489000 14308000 26919000 168930000 127480000 48834000 55134000 159330000 11192 1141 10202 94919;94920;94921;94922;94923;94924;94925;94926;94927;94928;94929;94930 75750;75751;75752;75753;75754;75755;75756;75757;75758;75759;75760 75759 9 EESGTIFGSQIK Unmodified 1294.6405 0.64049603 4326 Q9H0E9 BRD8 Bromodomain-containing protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 58.342 57.681 2 0.00016226 65761 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 85.533 75.546 297490000 0 89220000 0 11286000 10681000 16457000 17308000 11996000 11533000 24423000 15671000 24631000 20421000 18666000 25198000 11193 4326 10203 94931;94932;94933;94934;94935;94936;94937;94938;94939;94940;94941;94942;94943;94944 75761;75762;75763;75764;75765;75766;75767;75768;75769;75770;75771;75772;75773;75774;75775;75776;75777;75778 75775 18 EESISLMK Unmodified 935.46338 0.46338328 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46.252 45.417 2 0.022229 57882 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.753 57.15 422390000 12425000 292940000 0 4981000 5616900 9897600 6181700 6875200 7913900 10836000 15476000 10141000 7361800 12667000 19072000 11194 5071 10204 94945;94946;94947;94948;94949;94950;94951;94952;94953;94954;94955;94956;94957;94958 75779;75780;75781;75782;75783;75784;75785 75781 7 EESISLMK Oxidation (M) 951.4583 0.45829791 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 30.673 30.909 2 0.034618 33775 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 46.016 16.64 17328000 0 0 0 0 0 0 0 0 0 10810000 0 0 0 6518100 0 11195 5071 10204 94959;94960 75786;75787 75786 2 EESIVSSLR Unmodified 1018.5295 0.52948901 4534 Q9NP61 ARFGAP3 ADP-ribosylation factor GTPase-activating protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 49.707 49.959 2 0.0064509 56594 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 75.043 51.088 210100000 0 0 0 0 14681000 0 18024000 0 17305000 28646000 28648000 31787000 25343000 10445000 35224000 11196 4534 10205 94961;94962;94963;94964;94965;94966;94967;94968;94969;94970 75788;75789;75790;75791;75792;75793;75794;75795 75789 8 EESLADDLFR Unmodified 1193.5564 0.55643205 448 O60934 NBN Nibrin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 77.913 77.96 2 0.0035335 90335 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 87.308 78.094 93776000 0 0 0 6775700 4771500 8047900 5042400 0 4868800 11489000 12702000 9546600 8026000 7758300 14748000 11197 448 10206 94971;94972;94973;94974;94975;94976;94977;94978;94979;94980;94981 75796;75797;75798;75799;75800;75801;75802;75803;75804;75805 75803 10 EESLADDLFRYNPYLK Unmodified 1971.9578 0.95780742 448 O60934 NBN Nibrin yes yes 0 0 1 By MS/MS 2 0 1 1 95.299 87.169 3 1.0584E-10 112720 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.35 97.29 31720000 31720000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11198 448 10207 94982 75806 75806 1 EESPENLFLELEK Unmodified 1575.7668 0.76681875 2863 Q69YN4 KIAA1429 Protein virilizer homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 89.538 89.641 2 0.0018862 104145 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 74.944 64.991 21207000 0 0 0 0 1188900 1517000 0 1723900 1199600 3459900 2584800 2979600 0 1565400 4987900 11199 2863 10208 94983;94984;94985;94986;94987;94988;94989;94990;94991 75807;75808;75809;75810;75811;75812;75813 75809 7 EESRDEESPYATSLYHS Unmodified 1998.8443 0.8442938 3223 Q8IV50 LYSMD2 LysM and putative peptidoglycan-binding domain-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 49.205 48.129 3 1.2207E-09 61139 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.89 67.451 138070000 0 85819000 0 4112900 2320400 0 4735000 4066300 0 0 11113000 12482000 0 0 13421000 11200 3223 10209 94992;94993;94994;94995;94996;94997;94998;94999;95000;95001 75814;75815;75816;75817 75815 4 EESSELEQPFAQDTSSVGPDRK Unmodified 2435.1088 0.10884135 2532;2377 Q15424;Q14151 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 61.08 59.74 3 4.1987E-75 75566 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145.77 138.15 654300000 48841000 159530000 8576000 19699000 17816000 32244000 25914000 33340000 25796000 43405000 45374000 46933000 41347000 44284000 61205000 11201 2532;2377 10210 95002;95003;95004;95005;95006;95007;95008;95009;95010;95011;95012;95013;95014;95015;95016;95017 75818;75819;75820;75821;75822;75823;75824;75825;75826;75827;75828;75829;75830;75831;75832;75833;75834;75835;75836;75837;75838;75839 75823 22 EESSGTPAHQMNLR Oxidation (M) 1571.6998 0.69981859 3735 Q96AC1 FERMT2 Fermitin family homolog 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 12.251 12.397 3 0.00053798 11068 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 53.967 50.926 76008000 0 0 0 4399500 3871200 9911200 6674400 0 0 10764000 5905800 9562500 9419100 5733700 9767500 11202 3735 10211 95018;95019;95020;95021;95022;95023;95024;95025;95026;95027 75840;75841;75842;75843 75843 5304 2 EESSGTPAHQMNLR Unmodified 1555.7049 0.70490397 3735 Q96AC1 FERMT2 Fermitin family homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 25.894 26.094 3 1.0557E-05 27771 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 67.997 58.995 193490000 0 0 0 7164300 8959800 22245000 10282000 11638000 7706700 23274000 16804000 21687000 16893000 16456000 30375000 11203 3735 10211 95028;95029;95030;95031;95032;95033;95034;95035;95036;95037;95038;95039 75844;75845;75846;75847;75848;75849;75850;75851;75852 75845 9 EESSGTPAHQMNLRGCEVTPDVNISGQK Unmodified 3040.3978 0.39784627 3735 Q96AC1 FERMT2 Fermitin family homolog 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 66.403 60.378 4 0.0001489 75076 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 38.843 33.393 64728000 11215000 0 53513000 0 0 0 0 0 0 0 0 0 0 0 0 11204 3735 10212 95040;95041 75853;75854 75854 2 EESSGTPAHQMNLRGCEVTPDVNISGQK Oxidation (M) 3056.3928 0.3927609 3735 Q96AC1 FERMT2 Fermitin family homolog 2 yes yes 0 1 1 By MS/MS 2 0 1 1 54.216 50.319 4 3.192E-07 62947 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 53.475 48.025 40084000 0 0 40084000 0 0 0 0 0 0 0 0 0 0 0 0 11205 3735 10212 95042 75855 75855 5304 1 EESSHSWEDSSQSPTPRPK Unmodified 2169.9563 0.95630387 2147 Q08050 FOXM1 Forkhead box protein M1 yes yes 0 0 1 By matching By matching By MS/MS By matching 10 0 4 1 1 1 1 27.252 27.554 3 0.012876 29215 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 28.883 20.389 14861000 0 0 0 0 0 0 3367300 1630100 0 0 0 6774900 0 3089000 0 11206 2147 10213 95043;95044;95045;95046 75856 75856 1 EESSPSRSALFAQLNQGEAITK Unmodified 2362.1765 0.1764674 1408 P40123 CAP2 Adenylyl cyclase-associated protein 2 yes yes 0 0 1 By MS/MS 2 0 1 1 77.259 74.568 3 1.697E-10 90699 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 77.959 74.155 7852200 0 0 7852200 0 0 0 0 0 0 0 0 0 0 0 0 11207 1408 10214 95047 75857 75857 1 EESTAASETTEGSQGDSK Unmodified 1812.7497 0.74972472 3662 Q92793 CREBBP CREB-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 9.624 9.641 2 4.7643E-11 8133 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 88.552 73.541 10039000 0 0 0 3699000 0 0 0 0 0 6339500 0 0 0 0 0 11208 3662 10215 95048;95049;95050;95051 75858;75859;75860;75861 75858 4 EESTEVLK Unmodified 933.46549 0.46549177 1113 P20810 CAST Calpastatin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 20.788 20.1 2 0.0059861 19751 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 127.84 54.805 1113600000 78636000 112130000 0 62661000 52771000 33458000 85413000 48588000 45860000 63646000 118720000 134020000 73322000 82095000 122270000 11209 1113 10216 95052;95053;95054;95055;95056;95057;95058;95059;95060;95061;95062;95063;95064;95065;95066 75862;75863;75864;75865;75866;75867;75868;75869;75870;75871;75872;75873 75871 12 EESVVGSVTQLNQQIGQVNNAATLDLK Unmodified 2854.4672 0.46722969 2649 Q2KHR3 QSER1 Glutamine and serine-rich protein 1 yes yes 0 0 0 By MS/MS 3 0 1 1 89.899 86.688 3 1.3011E-05 103828 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 40.104 36.834 2526100 0 2526100 0 0 0 0 0 0 0 0 0 0 0 0 0 11210 2649 10217 95067 75874 75874 1 EETAGSYDSR Unmodified 1113.4574 0.45744628 417 O60610 DIAPH1 Protein diaphanous homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 9.8842 10.04 2 0.0023993 7133 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 83.998 73.306 53798000 0 0 0 0 2679400 6083500 3999700 3810500 2884700 5483500 6226000 5711100 4103300 4412300 8404000 11211 417 10218 95068;95069;95070;95071;95072;95073;95074;95075;95076;95077;95078;95079 75875;75876;75877;75878;75879;75880;75881;75882;75883;75884;75885;75886 75880 12 EETAGSYDSRNK Unmodified 1355.5953 0.59533675 417 O60610 DIAPH1 Protein diaphanous homolog 1 yes yes 0 0 1 By MS/MS 2.5 0.5 2 2 4 8.1489 4.8459 2;3 0.00029433 7061 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.71 87.218 96980000 0 96980000 0 0 0 0 0 0 0 0 0 0 0 0 0 11212 417 10219 95080;95081;95082;95083 75887;75888;75889;75890 75889 3 EETAQLTGPEAGRK Unmodified 1485.7423 0.74233534 1546 P48634 PRRC2A Protein PRRC2A yes yes 0 0 1 By matching By MS/MS By MS/MS By matching By matching 10 0 5 1 1 1 1 1 22.743 22.805 3 0.014906 23933 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 29.467 11.659 12048000 0 0 0 0 2027200 2122000 0 0 1776000 2901100 0 0 0 3221400 0 11213 1546 10220 95084;95085;95086;95087;95088 75891;75892 75891 2 EETDIAEQK Unmodified 1061.4877 0.48768378 3662 Q92793 CREBBP CREB-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.031 14.193 2 0.013016 12634 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 60.436 44.997 136050000 0 0 0 7312800 7235000 8328100 7896200 6482300 7445700 12752000 11912000 10034000 15488000 17650000 23512000 11214 3662 10221 95089;95090;95091;95092;95093;95094;95095;95096;95097;95098;95099;95100 75893;75894 75894 1 EETEELK Unmodified 876.40764 0.40764254 973 P12956 XRCC6 X-ray repair cross-complementing protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.79 1 3 1 10 3 2 1 1 1 1 1 1 1 1 1 1 17.305 16.784 1;2 0.011651 9023 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 150.02 11.945 463710000 330230000 9819500 0 10426000 0 15695000 14905000 11104000 11633000 8126100 16183000 14364000 11237000 9992700 0 11215 973 10222 95101;95102;95103;95104;95105;95106;95107;95108;95109;95110;95111;95112;95113;95114;95115 75895;75896;75897;75898;75899;75900;75901;75902;75903;75904;75905;75906;75907;75908;75909 75908 12 EETEIIEGEVVEIQIDRPATGTGSK Unmodified 2699.3501 0.35013425 5077 Q9Y230 RUVBL2 RuvB-like 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 2 2 1 83.549 78.201 3;4 2.0067E-167 100518 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 200.17 193.51 238430000 172260000 44901000 21267000 0 0 0 0 0 0 0 0 0 0 0 0 11216 5077 10223 95116;95117;95118;95119;95120 75910;75911;75912;75913;75914;75915;75916 75915 7 EETFALSSTK Unmodified 1111.5397 0.53971935 4839 Q9UBF2 COPG2 Coatomer subunit gamma-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 43.618 42.617 2 3.7156E-05 54061 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.92 58.849 158880000 0 82754000 0 0 4273500 0 6921900 0 13820000 8513900 11038000 0 11233000 0 20327000 11217 4839 10224 95121;95122;95123;95124;95125;95126;95127;95128;95129 75917;75918;75919;75920 75917 4 EETFSTLK Unmodified 953.47058 0.47057715 4985 Q9UL26 RAB22A Ras-related protein Rab-22A yes yes 0 0 0 By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 36.387 36.638 2 0.01026 39817 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 80.229 54.335 112420000 0 0 0 0 7675000 8021000 8949300 8803100 0 11279000 15647000 14139000 12113000 13453000 12338000 11218 4985 10225 95130;95131;95132;95133;95134;95135;95136;95137;95138;95139 75921;75922;75923;75924;75925 75925 5 EETFTLSTIK Unmodified 1167.6023 0.60231961 5267 Q9Y678 COPG1 Coatomer subunit gamma-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 3 1 1 1 1 1 1 1 1 1 1 1 1 1 68.35 67.213 2 0.0015516 85891 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.38 102.81 1881000000 0 1412800000 13359000 20183000 19746000 52013000 28540000 25041000 22847000 46204000 44145000 48814000 38289000 31751000 77256000 11219 5267 10226 95140;95141;95142;95143;95144;95145;95146;95147;95148;95149;95150;95151;95152;95153;95154;95155 75926;75927;75928;75929;75930;75931;75932;75933;75934;75935;75936;75937;75938;75939;75940;75941;75942;75943 75929 17 EETFTPMPSPYYMELTK Oxidation (M) 2078.9217 0.92168119 5082 Q9Y248 GINS2 DNA replication complex GINS protein PSF2 yes yes 0 1 0 By MS/MS 2 0 1 1 85.846 81.072 2 8.688E-13 100703 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.32 93.762 86281000 0 86281000 0 0 0 0 0 0 0 0 0 0 0 0 0 11220 5082 10227 95156 75944 75944 6469 1 EETFTPMPSPYYMELTK Unmodified 2062.9268 0.92676657 5082 Q9Y248 GINS2 DNA replication complex GINS protein PSF2 yes yes 0 0 0 By MS/MS 2 0 1 1 91.508 86.598 2 2.3433E-26 107485 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 141.32 120.09 141220000 0 141220000 0 0 0 0 0 0 0 0 0 0 0 0 0 11221 5082 10227 95157 75945 75945 1 EETIPPDYRLEEVK Unmodified 1716.857 0.85703074 1113 P20810 CAST Calpastatin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 1 3 2 65.97 60.78 2;3 0.00039521 73733 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 77.185 58.772 236360000 30754000 193660000 11939000 0 0 0 0 0 0 0 0 0 0 0 0 11222 1113 10228 95158;95159;95160;95161;95162;95163 75946;75947;75948;75949;75950;75951;75952;75953;75954;75955 75947 9 EETIQIITK Unmodified 1073.5968 0.5968403 4905 Q9UHP3 USP25 Ubiquitin carboxyl-terminal hydrolase 25 yes yes 0 0 0 By MS/MS 2 0 1 1 59.073 53.23 2 0.0085907 68452 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.698 63.804 42559000 0 42559000 0 0 0 0 0 0 0 0 0 0 0 0 0 11223 4905 10229 95164 75956 75956 1 EETLVIPSTGIK Unmodified 1285.7129 0.71293269 3850 Q96GA3 LTV1 Protein LTV1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 7 3.69 1 1 3 2 1 1 1 73.376 71.832 2 3.4109E-05 86287 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 101.11 90.276 208480000 0 185030000 0 0 0 0 0 0 2852100 0 0 0 8412200 0 12188000 11224 3850 10230 95165;95166;95167;95168;95169 75957;75958;75959;75960;75961 75959 5 EETPGQRPAVTETHQLAELNEK Unmodified 2476.2194 0.21939485 5066 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.8 2.86 3 17 1 2 2 2 1 2 3 1 1 1 2 2 50.809 50.076 3;4 1.6241E-43 55507 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.44 89.042 332380000 12384000 0 41641000 19798000 28722000 21907000 44019000 50828000 14325000 0 0 20189000 14064000 29076000 35430000 11225 5066 10231 95170;95171;95172;95173;95174;95175;95176;95177;95178;95179;95180;95181;95182;95183;95184;95185;95186;95187;95188;95189 75962;75963;75964;75965;75966;75967;75968;75969;75970;75971;75972;75973;75974;75975;75976;75977;75978 75967 14 EETPGTEWEK Unmodified 1204.5248 0.52479757 886 P09497 CLTB Clathrin light chain B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.72 2 13 1 1 1 2 2 1 1 1 1 1 1 1 1 31.501 30.872 2 0.0020908 42765 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.69 88.599 295580000 10182000 167860000 0 3489500 6556900 0 8349700 5016500 3060900 6028900 20020000 16313000 5644500 8522800 34532000 11226 886 10232 95190;95191;95192;95193;95194;95195;95196;95197;95198;95199;95200;95201;95202;95203;95204 75979;75980;75981;75982;75983;75984;75985;75986;75987;75988;75989;75990;75991;75992;75993 75982 14 EETQPPVALK Unmodified 1110.5921 0.59208927 3405 Q8NC51 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.32 3.28 1 2 1 15 2 2 1 1 1 1 1 1 1 2 1 2 2 1 44.824 44.375 2 0.0030458 45457 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 77.923 58.944 948760000 68630000 42593000 0 50698000 36713000 55193000 48439000 39937000 47217000 69597000 89059000 110570000 85811000 81763000 122540000 11227 3405 10233 95205;95206;95207;95208;95209;95210;95211;95212;95213;95214;95215;95216;95217;95218;95219;95220;95221;95222;95223 75994;75995;75996;75997;75998;75999;76000;76001;76002;76003;76004;76005;76006;76007;76008;76009;76010;76011 76002 18 EETSHIEELQSEETAISDFSTGENVGPLALPVGK Unmodified 3612.7319 0.73189639 4459 Q9H900 ZWILCH Protein zwilch homolog yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 94.214 88.901 3 1.8065E-62 112782 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.88 100.04 23874000 14068000 0 9805800 0 0 0 0 0 0 0 0 0 0 0 0 11228 4459 10234 95224;95225 76012;76013;76014;76015 76013 4 EETVGIFSPLSVK Unmodified 1404.75 0.75004648 2462 Q149N8 SHPRH E3 ubiquitin-protein ligase SHPRH yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 87.78 83.751 2 0.00072024 104273 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.258 75.361 39675000 0 39675000 0 0 0 0 0 0 0 0 0 0 0 0 0 11229 2462 10235 95226;95227 76016;76017 76016 2 EETVVENATPDYAAGLVSTQK Unmodified 2221.075 0.075022022 4381 Q9H3P2 NELFA Negative elongation factor A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 2 1 1 1 1 1 1 1 1 2 1 1 75.018 75.038 2;3 1.1017E-66 86150 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 189.1 181.55 181660000 0 0 0 13233000 10416000 12914000 12260000 9301900 9135500 14889000 15602000 19408000 28055000 12421000 24021000 11230 4381 10236 95228;95229;95230;95231;95232;95233;95234;95235;95236;95237;95238;95239;95240;95241 76018;76019;76020;76021;76022;76023;76024;76025;76026;76027;76028 76022 11 EETYNQLLDK Unmodified 1251.5983 0.59829686 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 53.676 51.631 2 0.0033911 65171 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.66 75.24 64073000 0 58037000 0 0 2514600 0 0 0 0 0 0 0 0 3521600 0 11231 5049 10237 95242;95243;95244 76029;76030 76029 2 EEVADPTAHRR Unmodified 1279.6269 0.62691165 2839 Q63ZY3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 10.398 10.616 3 0.010018 8888 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 61.353 39.722 33670000 0 0 0 0 0 0 0 0 5774100 6141900 0 6258500 7045700 8449400 0 11232 2839 10238 95245;95246;95247;95248;95249 76031;76032;76033 76033 2 EEVAEEAQSGGD Unmodified 1219.4841 0.48405496 574 O76070 SNCG Gamma-synuclein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.31 2.4 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 18.162 18.35 2 3.9152E-23 18360 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 164.71 161.77 616040000 0 0 0 26521000 34019000 43826000 36446000 25393000 36949000 53732000 62174000 68874000 42797000 57201000 128110000 11233 574 10239 95250;95251;95252;95253;95254;95255;95256;95257;95258;95259;95260;95261;95262 76034;76035;76036;76037;76038;76039;76040;76041;76042;76043;76044;76045;76046;76047;76048;76049 76040 15 EEVAGTLEAVQTIQSITQALQK Unmodified 2356.2486 0.24856971 2174 Q0JRZ9 FCHO2 F-BAR domain only protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 101.19 96.479 3 0.00041231 119280 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 56.055 51.505 6963200 0 6963200 0 0 0 0 0 0 0 0 0 0 0 0 0 11234 2174 10240 95263 76050 76050 1 EEVANKPDRAEIEK Unmodified 1626.8213 0.82131394 3153 Q86US8 SMG6 Telomerase-binding protein EST1A yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 18.982 19.143 3 0.029128 18974 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 45.28 28.974 32411000 0 0 0 3209700 2416900 3348600 2808300 2767100 0 3912000 3082700 4672600 3885800 2307800 0 11235 3153 10241 95264;95265;95266;95267;95268;95269;95270;95271;95272;95273 76051 76051 0 EEVAQNVVSMSK Oxidation (M) 1335.634 0.63403044 2264 Q13287 NMI N-myc-interactor yes yes 0 1 0 By MS/MS 2 0 1 1 33.652 29.009 2 0.00020164 37951 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.143 80.481 6815400 0 6815400 0 0 0 0 0 0 0 0 0 0 0 0 0 11236 2264 10242 95274 76052 76052 3695 1 EEVAQNVVSMSK Unmodified 1319.6391 0.63911582 2264 Q13287 NMI N-myc-interactor yes yes 0 0 0 By MS/MS 2 0 1 1 49.753 44.046 2 0.026601 57357 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.942 57.905 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11237 2264 10242 95275 76053 76053 1 EEVASLR Unmodified 802.41848 0.418482 399 O60437 PPL Periplakin yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 22.612 22.61 2 0.027176 23076 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 77.741 6.026 59833000 0 0 0 10754000 0 0 0 49079000 0 0 0 0 0 0 0 11238 399 10243 95276;95277 76054 76054 1 EEVASLRAK Unmodified 1001.5506 0.55055881 399 O60437 PPL Periplakin yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 21.126 17.828 2 0.034783 22652 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 107.66 9.3653 17171000 0 11427000 5744600 0 0 0 0 0 0 0 0 0 0 0 0 11239 399 10244 95278;95279 76055 76055 1 EEVAYEER Unmodified 1023.4509 0.45090434 4610 Q9NRV9 HEBP1 Heme-binding protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching 10 0 4 1 1 1 1 19.601 19.917 2 0.019504 20726 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 63.565 40.546 11710000 0 0 0 0 0 1702300 0 0 0 1977000 3531200 0 0 0 4499800 11240 4610 10245 95280;95281;95282;95283 76056;76057 76056 2 EEVAYEERACEGGK Unmodified 1625.6991 0.69914989 4610 Q9NRV9 HEBP1 Heme-binding protein 1 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 27.119 22.881 3 0.00017682 28784 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 96.866 92.299 83551000 0 83551000 0 0 0 0 0 0 0 0 0 0 0 0 0 11241 4610 10246 95284;95285 76058;76059 76059 2 EEVDVAVITAAECLK Unmodified 1645.8233 0.82328777 3086 Q7Z3T8 ZFYVE16 Zinc finger FYVE domain-containing protein 16 yes yes 0 0 0 By MS/MS 2 0 1 1 90.483 85.587 2 1.7105E-56 106420 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 171.05 80.945 16404000 0 16404000 0 0 0 0 0 0 0 0 0 0 0 0 0 11242 3086 10247 95286 76060 76060 1 EEVEVAQVQVPTPAR Unmodified 1650.8577 0.85769944 3072 Q7Z2T5 TRMT1L TRMT1-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 68.636 68.598 2 5.5662E-05 78694 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 97.957 75.911 34875000 0 0 0 2548400 3249500 4180900 3797500 0 0 4681900 7290600 0 4752000 4374200 0 11243 3072 10248 95287;95288;95289;95290;95291;95292;95293;95294;95295;95296 76061;76062;76063;76064;76065;76066;76067;76068;76069;76070 76068 9 EEVEVLK Unmodified 844.4542 0.45419881 2565;5172 Q9Y3Q8;O75157;Q15714 TSC22D4;TSC22D2;TSC22D1 TSC22 domain family protein 4;TSC22 domain family protein 2;TSC22 domain family protein 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 32.575 33.097 2 0.032282 35034 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.039 20.356 52022000 0 0 0 0 0 0 0 0 0 0 0 13374000 9612500 9957200 19078000 11244 5172;2565 10249 95297;95298;95299;95300 76071 76071 1 EEVFQEPAEEERDGRK Unmodified 1946.897 0.89699808 4822 Q9P2N5 RBM27 RNA-binding protein 27 yes yes 0 0 2 By MS/MS By MS/MS By matching 10 0 3 1 1 1 32.713 33.068 3 0.0070165 36372 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 57.414 47.314 13686000 0 0 0 0 0 4988100 0 0 0 0 0 0 0 0 8698000 11245 4822 10250 95301;95302;95303 76072;76073 76072 2 EEVGDFIQR Unmodified 1091.5247 0.52473799 3184 Q86WJ1 CHD1L Chromodomain-helicase-DNA-binding protein 1-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 52.838 52.907 2 0.012914 59971 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 60.59 16.143 38075000 0 0 0 0 3531000 9870200 3956700 2888300 0 0 12918000 0 0 4910600 0 11246 3184 10251 95304;95305;95306;95307;95308;95309 76074;76075;76076;76077;76078 76076 5 EEVGDFIQRYQDIEK Unmodified 1867.8952 0.89520716 3184 Q86WJ1 CHD1L Chromodomain-helicase-DNA-binding protein 1-like yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 80.568 75.216 3 0.0083755 96442 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.54 27.796 14557000 12123000 0 2434000 0 0 0 0 0 0 0 0 0 0 0 0 11247 3184 10252 95310;95311 76079;76080 76079 2 EEVGEEAIVELVENGK Unmodified 1742.8574 0.85742467 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.62 8 3 23 4 5 2 1 2 2 2 2 2 2 2 2 2 2 2 90.115 88.971 2;3 3.2514E-149 110281 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 183.81 179.94 1065100000 166970000 683910000 47220000 2654000 12292000 16345000 7266300 7916200 9679300 29572000 21484000 15682000 4715000 10822000 28598000 11248 1356 10253 95312;95313;95314;95315;95316;95317;95318;95319;95320;95321;95322;95323;95324;95325;95326;95327;95328;95329;95330;95331;95332;95333;95334;95335;95336;95337;95338;95339;95340;95341;95342;95343;95344;95345 76081;76082;76083;76084;76085;76086;76087;76088;76089;76090;76091;76092;76093;76094;76095;76096;76097;76098;76099;76100;76101;76102;76103;76104;76105;76106;76107;76108 76085 24 EEVGEEAIVELVENGKK Unmodified 1870.9524 0.95238769 1356 P35579 MYH9 Myosin-9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 84.969 83.851 3 4.4691E-07 105513 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.073 78.194 308130000 89587000 69081000 4655800 3488700 6876100 8968000 6258400 14711000 11367000 19855000 14761000 19639000 6194100 7472400 25209000 11249 1356 10254 95346;95347;95348;95349;95350;95351;95352;95353;95354;95355;95356;95357;95358;95359;95360;95361 76109;76110;76111;76112;76113;76114;76115;76116;76117;76118;76119 76110 11 EEVGINTETSSAERK Unmodified 1648.7904 0.79040774 2388 Q14191 WRN Werner syndrome ATP-dependent helicase yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 30.187 25.792 3 0.0044463 33773 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 32.815 18.463 9891300 0 9891300 0 0 0 0 0 0 0 0 0 0 0 0 0 11250 2388 10255 95362;95363 76120 76120 1 EEVGQYLK Unmodified 964.48656 0.48656157 2878 Q6GMV3 PTRHD1 Putative peptidyl-tRNA hydrolase PTRHD1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.25 3.34 2 1 1 1 2 1 42.376 38.296 2 0.01518 51718 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.407 33.619 408540000 11881000 390730000 0 0 0 0 0 0 0 0 5928100 0 0 0 0 11251 2878 10256 95364;95365;95366;95367 76121;76122;76123;76124 76123 3 EEVIQTSTK Unmodified 1033.5292 0.52915466 3453 Q8NG31 CASC5 Protein CASC5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 19.057 19.224 2 0.0077155 19262 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 71.692 36.8 13806000 0 0 0 1743800 1362800 2212400 0 0 0 0 3102100 0 2269800 0 3114700 11252 3453 10257 95368;95369;95370;95371;95372;95373;95374;95375;95376;95377 76125;76126;76127;76128;76129;76130;76131;76132;76133 76129 9 EEVLILR Unmodified 870.51747 0.51746776 5006;5204 Q9ULV0;Q9Y4I1 MYO5B;MYO5A Unconventional myosin-Vb;Unconventional myosin-Va no no 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 60.736 60.752 2 0.04788 69447 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 65.263 30.37 25427000 0 0 0 1657200 1713700 3698500 1912800 1346900 2711300 2947000 3625800 0 3433000 2380800 0 11253 5006;5204 10258 95378;95379;95380;95381;95382;95383;95384;95385;95386;95387 76134 76134 1 EEVLQDPVLK Unmodified 1168.634 0.63395408 3920 Q96LJ7 DHRS1 Dehydrogenase/reductase SDR family member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.635 60.739 2 0.00091675 69146 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 114.28 103.81 199430000 0 0 0 15483000 15453000 14293000 14309000 19040000 11761000 18753000 17400000 20284000 19621000 15076000 17961000 11254 3920 10259 95388;95389;95390;95391;95392;95393;95394;95395;95396;95397;95398;95399 76135;76136;76137;76138;76139;76140;76141;76142;76143;76144;76145;76146 76136 12 EEVMGLCIGELNDDTRSDSK Oxidation (M) 2282.9995 0.99949059 1506 P46736 BRCC3 Lys-63-specific deubiquitinase BRCC36 yes yes 0 1 1 By MS/MS 2 0 1 1 74.793 66.663 3 5.0073E-05 88120 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.334 55.717 11587000 11587000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11255 1506 10260 95400 76147 76147 2380 1 EEVMGLCIGELNDDTRSDSK Unmodified 2267.0046 0.00457597 1506 P46736 BRCC3 Lys-63-specific deubiquitinase BRCC36 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 80.745 75.366 3 1.9322E-58 98435 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 123.19 115.29 18246000 14166000 0 4080500 0 0 0 0 0 0 0 0 0 0 0 0 11256 1506 10260 95401;95402 76148 76148 1 EEVNDRPVRR Unmodified 1268.6585 0.65854613 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 2 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.4333 7.5612 3 2.9567E-10 6125 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 136.57 112.82 347480000 0 0 0 9028200 13311000 16330000 15263000 16095000 22475000 30873000 79661000 44862000 37222000 26928000 35436000 11257 5216 10261 95403;95404;95405;95406;95407;95408;95409;95410;95411;95412;95413;95414 76149;76150;76151;76152;76153 76152 5 EEVNECGESIDRNNLK Unmodified 1904.8534 0.8534187 4495 Q9HB21 PLEKHA1 Pleckstrin homology domain-containing family A member 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 33.882 33.967 3 0.017974 36397 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.285 27.804 12989000 0 0 0 0 2259000 2730800 2530800 0 0 0 0 0 0 0 5468200 11258 4495 10262 95415;95416;95417;95418 76154;76155 76154 2 EEVNEWFTK Unmodified 1180.5401 0.5400537 4962 Q9UKD2 MRTO4 mRNA turnover protein 4 homolog yes yes 0 0 0 By MS/MS 10 0 1 1 62.679 63.032 2 0.046927 72016 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 72.968 62.5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11259 4962 10263 95419 76156 76156 1 EEVNHYSNEINK Unmodified 1474.6688 0.66883604 671 O95602 POLR1A DNA-directed RNA polymerase I subunit RPA1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 26.538 22.3 3 0.0015441 29378 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 56.122 41.091 46143000 0 46143000 0 0 0 0 0 0 0 0 0 0 0 0 0 11260 671 10264 95420;95421 76157 76157 1 EEVPTALVEAHVR Unmodified 1448.7623 0.7623425 3475 Q8TAQ2 SMARCC2 SWI/SNF complex subunit SMARCC2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.401 64.491 3 0.00067852 72943 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.03 50.978 184140000 0 0 0 7292900 6118700 19236000 9212600 7389300 10456000 18349000 20966000 20716000 18562000 14636000 31203000 11261 3475 10265 95422;95423;95424;95425;95426;95427;95428;95429;95430;95431;95432;95433 76158;76159;76160;76161;76162;76163;76164;76165;76166;76167;76168;76169 76161 10 EEVPTALVEAHVRK Unmodified 1576.8573 0.85730551 3475 Q8TAQ2 SMARCC2 SWI/SNF complex subunit SMARCC2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.59 3.1 1 4 24 2 1 2 2 1 2 2 2 3 2 2 2 2 2 2 58.06 57.624 3;4 1.4435E-20 77327 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 99.941 87.521 499360000 48523000 30387000 62046000 18480000 9602700 34493000 19067000 25934000 24356000 28687000 38168000 37957000 27874000 32572000 61214000 11262 3475 10266 95434;95435;95436;95437;95438;95439;95440;95441;95442;95443;95444;95445;95446;95447;95448;95449;95450;95451;95452;95453;95454;95455;95456;95457;95458;95459;95460;95461;95462 76170;76171;76172;76173;76174;76175;76176;76177;76178;76179;76180;76181;76182;76183;76184;76185;76186;76187;76188;76189;76190;76191;76192;76193;76194;76195;76196;76197;76198;76199;76200 76185 26 EEVPTPTLGSITIPRPQGR Unmodified 2047.1062 0.10620299 3516 Q8TEH3 DENND1A DENN domain-containing protein 1A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 80.035 80.173 3 0.001809 92193 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 38.417 33.748 45552000 0 0 0 0 0 4890300 0 4023700 4529800 6495700 5469900 5718700 2762100 4266300 7395800 11263 3516 10267 95463;95464;95465;95466;95467;95468;95469;95470;95471 76201;76202;76203;76204;76205;76206;76207 76204 7 EEVPTQESVK Unmodified 1144.5612 0.56118307 3970 Q96RL7 VPS13A Vacuolar protein sorting-associated protein 13A yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 24.739 24.902 2 0.0063431 26278 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 65.305 4.7867 16005000 0 0 0 0 0 0 0 7995100 0 8009900 0 0 0 0 0 11264 3970 10268 95472;95473 76208;76209 76208 2 EEVQAGVAAANTK Unmodified 1286.6466 0.64664404 3166 Q86VI3 IQGAP3 Ras GTPase-activating-like protein IQGAP3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 25.089 25.422 2 0.00062576 25888 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.416 32.547 19206000 0 0 0 0 0 3344200 0 0 1534600 2652400 0 3007200 1884800 0 6782400 11265 3166 10269 95474;95475;95476;95477;95478;95479;95480 76210;76211;76212;76213;76214;76215 76212 5 EEVQLTSK Unmodified 932.48148 0.48147619 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.124 21.329 2 0.00038452 22009 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 151.29 71.838 415700000 0 0 0 24938000 26909000 36235000 29765000 24383000 23412000 36263000 41829000 52001000 34709000 38576000 46678000 11266 3641 10270 95481;95482;95483;95484;95485;95486;95487;95488;95489;95490;95491;95492 76216;76217;76218;76219;76220;76221;76222;76223;76224;76225;76226 76217 11 EEVQRETQQVEK Unmodified 1501.7372 0.73724996 3954 Q96QA5 GSDMA Gasdermin-A yes yes 0 0 1 By MS/MS By matching 10 0 2 1 1 14.123 14.135 3 0.00088469 13602 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 56.951 36.094 8940500 0 0 0 7662900 0 0 0 0 0 1277500 0 0 0 0 0 11267 3954 10271 95493;95494 76227 76227 1 EEVRDDKTTIK Unmodified 1332.6885 0.68850885 2239 Q13136 PPFIA1 Liprin-alpha-1 yes yes 0 0 2 By MS/MS By MS/MS 2 0 4 2 2 26.555 21.937 2 0.022329 29176 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.906 40.865 35944000 3405800 32538000 0 0 0 0 0 0 0 0 0 0 0 0 0 11268 2239 10272 95495;95496;95497;95498 76228;76229;76230 76228 2 EEVSIEVLK Unmodified 1044.5703 0.5702912 1797 P57740 NUP107 Nuclear pore complex protein Nup107 yes yes 0 0 0 By MS/MS By matching By MS/MS 7.33 3.77 1 2 1 1 1 66.383 64.621 2 0.020833 73255 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.786 12.683 20211000 0 13191000 0 0 0 3002800 0 0 0 0 0 0 0 0 4016900 11269 1797 10273 95499;95500;95501 76231;76232 76232 2 EEVSRLEEQMNGLK Oxidation (M) 1676.8039 0.80394931 965 P12270 TPR Nucleoprotein TPR yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.69 1 1 3 1 1 1 1 1 37.37 36.71 3 0.01105 40967 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 42.941 30.314 45973000 0 0 13113000 0 0 11338000 0 6147300 0 0 0 0 0 0 15375000 11270 965 10274 95502;95503;95504;95505;95506 76233;76234;76235 76233 1262 1 EEVSRLEEQMNGLK Unmodified 1660.809 0.80903469 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.35 5 1 19 1 3 2 1 1 1 2 2 2 2 2 2 2 2 60.921 59.801 2;3 2.2415E-87 77334 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 215.72 167.83 360140000 9747300 122550000 34296000 0 4523900 11109000 5629100 10914000 15569000 20368000 27676000 22558000 14958000 18820000 41416000 11271 965 10274 95507;95508;95509;95510;95511;95512;95513;95514;95515;95516;95517;95518;95519;95520;95521;95522;95523;95524;95525;95526;95527;95528;95529;95530;95531 76236;76237;76238;76239;76240;76241;76242;76243 76238 5 EEVSRQELR Unmodified 1144.5836 0.58364985 512 O75528 TADA3 Transcriptional adapter 3 yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.642 14.805 3 0.0053744 14381 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 62.823 41.359 139820000 0 0 0 7688400 10213000 12219000 7720800 7476700 10458000 14542000 18037000 17087000 11000000 8969800 14407000 11272 512 10275 95532;95533;95534;95535;95536;95537;95538;95539;95540;95541;95542;95543 76244;76245;76246 76245 3 EEVTELLAR Unmodified 1058.5608 0.56078914 1087 P19388 POLR2E DNA-directed RNA polymerases I, II, and III subunit RPABC1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 63.255 63.342 2 0.0033037 72958 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 93.374 55.815 227650000 0 0 0 10792000 16566000 19470000 15603000 0 10713000 27515000 24666000 24709000 22197000 22442000 32976000 11273 1087 10276 95544;95545;95546;95547;95548;95549;95550;95551;95552;95553;95554 76247;76248;76249;76250;76251;76252;76253;76254;76255;76256;76257;76258;76259 76258 13 EEVTELLARYK Unmodified 1349.7191 0.7190807 1087 P19388 POLR2E DNA-directed RNA polymerases I, II, and III subunit RPABC1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 78.861 73.676 3 0.0037011 94457 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.379 62.503 117160000 29675000 74253000 13233000 0 0 0 0 0 0 0 0 0 0 0 0 11274 1087 10277 95555;95556;95557 76260;76261;76262 76261 3 EEVVGGDDSDGLR Unmodified 1346.595 0.5950024 1190 P25490 YY1 Transcriptional repressor protein YY1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching 10 0 7 1 1 1 1 1 1 1 34.644 34.683 2 0.00043284 38181 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 79.974 55.819 16696000 0 0 0 2130400 1680800 0 2432300 1170100 0 1822900 4012300 0 0 3447400 0 11275 1190 10278 95558;95559;95560;95561;95562;95563;95564 76263;76264;76265 76263 3 EEVVIAGMSGK Oxidation (M) 1134.5591 0.55907458 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 1 0 By MS/MS By MS/MS 1 0 2 1 1 101.78 102.67 2 0.0059403 93803 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 71.349 45.612 1293400 0 1293400 0 0 0 0 0 0 0 0 0 0 0 0 0 11276 1565 10279 95565;95566 76266;76267 76267 2493 2 EEVVLLTHGDSVDK Unmodified 1539.7781 0.77805214 1612 P49915 GMPS GMP synthase [glutamine-hydrolyzing] yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.03 3.36 6 3 26 3 4 2 1 2 3 2 3 2 2 2 2 3 2 2 53.424 52.285 2;3 2.3776E-29 68291 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 148.28 133.01 1286200000 167040000 230190000 47901000 30950000 25458000 111420000 45125000 57581000 30657000 92573000 73910000 80718000 70784000 72617000 149240000 11277 1612 10280 95567;95568;95569;95570;95571;95572;95573;95574;95575;95576;95577;95578;95579;95580;95581;95582;95583;95584;95585;95586;95587;95588;95589;95590;95591;95592;95593;95594;95595;95596;95597;95598;95599;95600;95601 76268;76269;76270;76271;76272;76273;76274;76275;76276;76277;76278;76279;76280;76281;76282;76283;76284;76285;76286;76287;76288;76289;76290;76291;76292;76293;76294;76295;76296;76297;76298 76274 26 EEYAVLISEAQAIK Unmodified 1562.8192 0.81918867 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 84.624 83.219 2;3 3.7068E-39 103247 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 164.65 145.67 361460000 15656000 254490000 0 1400500 4064700 7708000 3089300 6478000 7621100 13173000 8947200 10202000 5036800 7623400 15964000 11278 2392 10281 95602;95603;95604;95605;95606;95607;95608;95609;95610;95611;95612;95613;95614;95615;95616;95617;95618 76299;76300;76301;76302;76303;76304;76305;76306;76307;76308;76309;76310;76311;76312;76313;76314 76303 16 EEYITSALESTEEK Unmodified 1627.7465 0.74647724 1695 P52732 KIF11 Kinesin-like protein KIF11 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 72.505 66.394 2 3.8268E-18 86871 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 147.91 130.88 218270000 8108300 210170000 0 0 0 0 0 0 0 0 0 0 0 0 0 11279 1695 10282 95619;95620;95621 76315;76316;76317 76317 3 EEYLLLR Unmodified 934.51238 0.51238239 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.436 67.518 2 0.034267 77302 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 71.359 28.641 88086000 0 0 0 9117500 6829800 9014100 7521900 3667800 4568000 10154000 7062800 10249000 6517300 6022500 7361700 11280 1518 10283 95622;95623;95624;95625;95626;95627;95628;95629;95630;95631;95632;95633 76318;76319;76320;76321;76322 76318 5 EEYNGVIEEFLATGEK Unmodified 1826.8574 0.85742467 4394 Q9H4A4 RNPEP Aminopeptidase B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.22 2.44 5 3 1 3 3 2 1 93.984 89.988 2;3 2.3814E-16 108527 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 114.63 109.36 380270000 130910000 231740000 14052000 0 0 0 0 0 0 0 0 0 0 0 3567700 11281 4394 10284 95634;95635;95636;95637;95638;95639;95640;95641;95642 76323;76324;76325;76326;76327;76328;76329;76330 76327 7 EEYPDRIMNTFSVVPSPK Oxidation (M) 2124.0198 0.019755749 1963;842;2306 P07437;P68371;Q13509 TUBB;TUBB4B;TUBB3 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-3 chain no no 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 74.2 74.33 3 0.00011752 85633 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 56.817 22.944 38732000 0 0 0 0 0 3812800 0 0 4595600 0 0 13446000 10968000 5909300 0 11282 842;1963;2306 10285 95643;95644;95645;95646;95647 76331;76332;76333;76334;76335;76336 76336 1038;3769 6 EEYQLVQVEQK Unmodified 1391.6933 0.69325988 4588 Q9NR30 DDX21 Nucleolar RNA helicase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.829 52.973 2 0.00042336 59915 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 85.807 66.536 96349000 0 0 0 3451400 4400000 7141100 4307300 3142300 7078600 10514000 13657000 9304300 11784000 9468200 12101000 11283 4588 10286 95648;95649;95650;95651;95652;95653;95654;95655;95656;95657;95658;95659 76337;76338;76339;76340 76340 4 EEYQQTWYHEGPNSLK Unmodified 2007.8963 0.8962698 303 O43172 PRPF4 U4/U6 small nuclear ribonucleoprotein Prp4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 56.492 56.756 3 0.0035506 64366 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 41.625 36.308 168530000 0 0 0 0 0 14207000 8401000 10302000 11156000 17509000 22243000 22845000 10584000 13492000 37789000 11284 303 10287 95660;95661;95662;95663;95664;95665;95666;95667;95668;95669 76341;76342;76343;76344;76345;76346;76347 76343 6 EEYQSLIR Unmodified 1036.5189 0.51892433 5159 Q9Y3C8 UFC1 Ubiquitin-fold modifier-conjugating enzyme 1 yes yes 0 0 0 By MS/MS 2 0 1 1 53.689 47.897 2 0.010724 62024 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 111.65 72.857 51125000 0 51125000 0 0 0 0 0 0 0 0 0 0 0 0 0 11285 5159 10288 95670 76348 76348 1 EEYQSLIRYVENNK Unmodified 1783.8741 0.87407779 5159 Q9Y3C8 UFC1 Ubiquitin-fold modifier-conjugating enzyme 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 83.355 76.93 3 0.0045238 98481 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.892 74.553 39824000 17559000 22265000 0 0 0 0 0 0 0 0 0 0 0 0 0 11286 5159 10289 95671;95672 76349;76350;76351 76351 2 EEYTDDNALIPK Unmodified 1406.6565 0.65654002 3111 Q7Z6E9 RBBP6 E3 ubiquitin-protein ligase RBBP6 yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 57.888 57.977 2 0.0056036 65129 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.751 29.796 24617000 0 0 0 0 4725900 0 0 7645300 0 0 0 0 0 0 12246000 11287 3111 10290 95673;95674;95675 76352 76352 1 EFADFEYR Unmodified 1075.4611 0.4610751 3415 Q8ND56 LSM14A Protein LSM14 homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.427 61.526 2 0.018652 69921 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.265 58.161 94951000 0 0 0 6735000 6843400 6340900 5531200 4817800 5886900 10272000 11285000 12034000 7673100 7321100 10211000 11288 3415 10291 95676;95677;95678;95679;95680;95681;95682;95683;95684;95685;95686;95687 76353;76354;76355;76356;76357;76358;76359;76360 76360 8 EFADFEYRK Unmodified 1203.556 0.55603811 3415 Q8ND56 LSM14A Protein LSM14 homolog A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.316 48.478 3 0.013073 54636 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 37.556 30.277 250590000 0 0 0 14647000 11017000 23858000 17538000 12333000 18755000 22257000 22174000 34743000 24478000 18088000 30698000 11289 3415 10292 95688;95689;95690;95691;95692;95693;95694;95695;95696;95697;95698;95699 76361;76362;76363;76364 76361 4 EFADSLGIPFLETSAK Unmodified 1723.8669 0.86686715 1911;4338 P62820;Q9H0U4;Q92928 RAB1A;RAB1B;RAB1C Ras-related protein Rab-1A;Ras-related protein Rab-1B;Putative Ras-related protein Rab-1C no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.52 3.62 6 2 17 2 4 2 1 1 1 1 1 1 2 2 2 1 2 2 94.772 94.089 2;3 3.0266E-38 115106 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 180.47 156.24 2841900000 3528200 2273800000 40128000 4973800 14498000 20487000 17720000 39959000 28530000 94659000 69052000 46707000 15469000 35786000 136590000 11290 1911;4338 10293 95700;95701;95702;95703;95704;95705;95706;95707;95708;95709;95710;95711;95712;95713;95714;95715;95716;95717;95718;95719;95720;95721;95722;95723;95724 76365;76366;76367;76368;76369;76370;76371;76372;76373;76374;76375;76376;76377;76378;76379;76380;76381;76382;76383;76384;76385;76386;76387;76388 76370 24 EFAGEDTSDLFLEER Unmodified 1756.7792 0.77917435 237 O14980 XPO1 Exportin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.795 79.854 2 6.3298E-28 92087 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 138.94 122.4 98236000 0 0 0 3190800 3737500 14556000 4764700 4916400 3976600 10525000 8761000 12254000 4484900 5490300 21580000 11291 237 10294 95725;95726;95727;95728;95729;95730;95731;95732;95733;95734;95735;95736 76389;76390;76391;76392;76393;76394;76395;76396;76397;76398;76399;76400;76401;76402 76392 14 EFAGEDTSDLFLEEREIALR Unmodified 2339.1281 0.12812022 237 O14980 XPO1 Exportin-1 yes yes 0 0 1 By MS/MS 2 0 1 1 91.608 83.478 3 0.00049057 108320 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.754 40.394 6652500 6652500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11292 237 10295 95737 76403 76403 1 EFAGEDTSDLFLEEREIALRQADEEK Unmodified 3039.4309 0.43090377 237 O14980 XPO1 Exportin-1 yes yes 0 0 2 By MS/MS By MS/MS 2.67 0.471 1 2 2 1 87.015 82.027 4 2.785E-06 99375 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 64.377 61.835 430370000 423570000 6808200 0 0 0 0 0 0 0 0 0 0 0 0 0 11293 237 10296 95738;95739;95740 76404;76405;76406;76407 76406 4 EFALSNLK Unmodified 920.49673 0.49673232 4168 Q9BUQ8 DDX23 Probable ATP-dependent RNA helicase DDX23 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.95 63.046 2 0.0054002 72232 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 116.3 42.108 278030000 0 0 0 17870000 16595000 17512000 19469000 22972000 11318000 21461000 23704000 36604000 28237000 31287000 31000000 11294 4168 10297 95741;95742;95743;95744;95745;95746;95747;95748;95749;95750;95751;95752 76408;76409;76410;76411;76412;76413;76414;76415;76416 76414 8 EFALTNPEK Unmodified 1047.5237 0.52367535 4344 Q9H173 SIL1 Nucleotide exchange factor SIL1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 54.687 47.717 2 0.001028 62269 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 141.52 114.56 141290000 5030400 136250000 0 0 0 0 0 0 0 0 0 0 0 0 0 11295 4344 10298 95753;95754 76417 76417 1 EFAQIIK Unmodified 847.48035 0.48035398 854 P07954 FH Fumarate hydratase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching By MS/MS 7.21 3.75 4 1 9 1 3 1 1 1 1 1 1 1 1 1 1 54.994 52.964 1;2 0.029482 68552 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.669 25.279 1453100000 46220000 1334600000 34777000 3218300 1589600 5315200 2240300 2594400 0 3359000 9634200 0 2415500 7159700 0 11296 854 10299 95755;95756;95757;95758;95759;95760;95761;95762;95763;95764;95765;95766;95767;95768 76418;76419;76420;76421;76422 76418 5 EFAVCPSYPPIVTVPK Unmodified 1802.9277 0.92769326 3960 Q96QG7 MTMR9 Myotubularin-related protein 9 yes yes 0 0 0 By MS/MS 2 0 1 1 90.16 85.264 2 0.00067886 106034 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.169 69.293 37119000 0 37119000 0 0 0 0 0 0 0 0 0 0 0 0 0 11297 3960 10300 95769 76423 76423 1 EFCAFSQTLQPQNR Unmodified 1724.7941 0.79405333 2748;2888 Q6IN85;Q5MIZ7 SMEK1;SMEK2 Serine/threonine-protein phosphatase 4 regulatory subunit 3A;Serine/threonine-protein phosphatase 4 regulatory subunit 3B no no 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 69.322 69.431 2 1.2862E-05 79753 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 89.171 83.068 31973000 0 0 0 1350700 0 4510900 0 0 0 2833900 3209500 5883800 3357600 3098000 7728900 11298 2888;2748 10301 95770;95771;95772;95773;95774;95775;95776;95777 76424;76425;76426;76427;76428 76425 5 EFCENLSADCR Unmodified 1399.5496 0.54964888 1271 P30153 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 42.693 42.721 2 0.00062376 46787 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.148 65.379 25058000 0 0 0 2650300 1915600 3166900 0 0 1904200 0 0 0 0 6724000 8697300 11299 1271 10302 95778;95779;95780;95781;95782;95783 76429;76430;76431;76432;76433 76430 5 EFCQQEVEPMCK Unmodified 1583.6418 0.64183471 3840 Q96FW1 OTUB1 Ubiquitin thioesterase OTUB1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 50.948 44.114 2 7.5768E-24 57619 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 167.12 156.81 188550000 7080200 181470000 0 0 0 0 0 0 0 0 0 0 0 0 0 11300 3840 10303 95784;95785 76434;76435 76434 2 EFCQQEVEPMCK Oxidation (M) 1599.6367 0.63674933 3840 Q96FW1 OTUB1 Ubiquitin thioesterase OTUB1 yes yes 0 1 0 By MS/MS 2 0 1 1 40.278 33.656 2 0.034467 46659 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.756 50.111 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11301 3840 10303 95786 76436 76436 1 EFDAILINPK Unmodified 1158.6285 0.62847478 5118 Q9Y2T3 GDA Guanine deaminase yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.69 3.47 2 2 9 2 1 1 1 1 1 1 1 1 1 1 1 78.673 77.34 2 0.002807 89037 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.906 47.014 466980000 75320000 76734000 33227000 26590000 9384500 0 9372300 14272000 0 20117000 37566000 47032000 0 30591000 86779000 11302 5118 10304 95787;95788;95789;95790;95791;95792;95793;95794;95795;95796;95797;95798;95799 76437;76438;76439;76440;76441;76442;76443;76444;76445 76439 8 EFDEDSEDRLVNEK Unmodified 1723.7537 0.75368788 4898 Q9UHD8 SEPT9 Septin-9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 44.141 43.699 3 0.00025439 49150 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 73.927 67.558 210400000 8677500 0 0 8533700 9707400 16468000 10839000 15509000 13736000 28540000 28590000 17781000 13271000 13323000 25423000 11303 4898 10305 95800;95801;95802;95803;95804;95805;95806;95807;95808;95809;95810;95811;95812 76446;76447;76448;76449;76450;76451;76452;76453;76454;76455;76456 76454 9 EFDEDVYNHK Unmodified 1294.5466 0.54659564 3807 Q96EB1 ELP4 Elongator complex protein 4 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 38.667 32.902 3 0.017909 43346 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 36.422 31.108 43983000 5423700 38559000 0 0 0 0 0 0 0 0 0 0 0 0 0 11304 3807 10306 95813;95814 76457 76457 1 EFDELNPSAQR Unmodified 1304.5997 0.59969384 1041 P16615 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 47.705 47.812 2 0.0048928 53825 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 95.502 83.455 52241000 0 0 0 5366400 3417500 3784500 3343500 4485900 0 5570900 5167300 7678900 8926300 4499500 0 11305 1041 10307 95815;95816;95817;95818;95819;95820;95821;95822;95823;95824;95825 76458;76459;76460;76461;76462;76463;76464;76465;76466 76461 3 EFDHSNCK Unmodified 1035.408 0.40799367 5219 Q9Y546 LRRC42 Leucine-rich repeat-containing protein 42 yes yes 0 0 0 By MS/MS 2 0 1 1 6.2867 3.0464 2 0.031271 5086 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.189 71.052 10076000 0 10076000 0 0 0 0 0 0 0 0 0 0 0 0 0 11306 5219 10308 95826 76467 76467 1 EFDMILGK Unmodified 951.47355 0.47355404 3311 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 73.489 73.579 2 0.01579 84732 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 68.312 44.113 58658000 0 0 0 0 4288800 7596300 7510500 7483400 5198200 0 0 0 0 7904800 18677000 11307 3311 10309 95827;95828;95829;95830;95831;95832;95833 76468;76469;76470;76471;76472 76472 5 EFDPTITDASLSLPSR Unmodified 1747.8628 0.8628444 2117 Q05682 CALD1 Caldesmon yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 82.708 82.191 2 3.9998E-06 95524 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 81.494 66.814 57791000 0 32526000 0 0 1806700 0 0 2026000 2944400 4096600 4959800 5991300 3440400 0 0 11308 2117 10310 95834;95835;95836;95837;95838;95839;95840;95841;95842;95843;95844 76473;76474;76475;76476;76477;76478;76479;76480;76481;76482;76483 76482 10 EFDPTITDASLSLPSRR Unmodified 1903.964 0.96395543 2117 Q05682 CALD1 Caldesmon yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 77.842 77.467 3 1.8191E-25 89324 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 83.966 77.55 134660000 0 0 7030000 0 7802100 12772000 0 14752000 0 0 0 32932000 0 0 59372000 11309 2117 10311 95845;95846;95847;95848;95849;95850 76484;76485;76486;76487;76488;76489;76490 76487 7 EFDQNVK Unmodified 878.4134 0.41339662 4896 Q9UHD1 CHORDC1 Cysteine and histidine-rich domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 16.682 15.848 2 0.023669 15907 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 84.359 39.386 2057200000 71364000 1820900000 4310500 5338300 4361100 14851000 12919000 8484400 6622200 13888000 0 14912000 17242000 26959000 35044000 11310 4896 10312 95851;95852;95853;95854;95855;95856;95857;95858;95859;95860;95861;95862;95863;95864;95865 76491;76492;76493;76494;76495;76496;76497 76491 7 EFDRHSGSDR Unmodified 1204.5221 0.52211222 3405 Q8NC51 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 5.688 5.778 3 0.0012188 3490 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 96.113 87.42 91905000 0 0 0 10151000 9219700 6369400 14040000 12696000 9405600 0 6977300 8634300 6075700 8335600 0 11311 3405 10313 95866;95867;95868;95869;95870;95871;95872;95873;95874;95875 76498;76499;76500;76501;76502;76503;76504;76505;76506;76507 76499 10 EFDYVFSIDVNEGGPSYK Unmodified 2064.9317 0.93165225 5085 Q9Y263 PLAA Phospholipase A-2-activating protein yes yes 0 0 0 By MS/MS 2 0 1 1 92.815 84.685 2 4.2544E-07 109648 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 111.31 101.8 11999000 11999000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11312 5085 10314 95876 76508 76508 1 EFECHSMK Oxidation (M) 1082.4161 0.41611551 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.3784 6.5031 2 0.025927 4611 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 50.703 37.715 24626000 0 0 0 1210200 1496400 1177800 1856600 1193300 2208400 1540500 2381900 3489500 3472000 2445300 2153900 11313 2556 10315 95877;95878;95879;95880;95881;95882;95883;95884;95885;95886;95887;95888 76509 76509 1 EFEDDLVK Unmodified 993.46549 0.46549177 296 O43148 RNMT mRNA cap guanine-N7 methyltransferase yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 48.928 49.651 2 0.015996 55100 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.981 30.335 18197000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18197000 11314 296 10316 95889;95890 76510;76511 76510 2 EFEDPRDAPPPTR Unmodified 1525.7161 0.71612058 868 P08621 SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.362 36.543 3 0.0028739 40350 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 59.227 48.583 662650000 0 0 0 39123000 43570000 44708000 59895000 35726000 34763000 51726000 49782000 93336000 67836000 48162000 94026000 11315 868 10317 95891;95892;95893;95894;95895;95896;95897;95898;95899;95900;95901;95902 76512;76513;76514;76515;76516;76517;76518 76512 1 EFEDPRDAPPPTRAETR Unmodified 1982.9446 0.94461697 868 P08621 SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 36.11 36.29 3;4 4.5445E-06 39032 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.078 73.077 339150000 0 0 0 18268000 23054000 24997000 33240000 32527000 20603000 30713000 26571000 27411000 39047000 31949000 30773000 11316 868 10318 95903;95904;95905;95906;95907;95908;95909;95910;95911;95912;95913;95914;95915;95916;95917;95918;95919;95920;95921;95922;95923;95924;95925;95926 76519;76520;76521;76522;76523;76524;76525;76526;76527;76528;76529;76530;76531;76532;76533;76534;76535 76523 14 EFEDRGFVQVDDGRK Unmodified 1795.8489 0.84892567 1733 P54136 RARS Arginine--tRNA ligase, cytoplasmic yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 47.602 46.867 3 3.3403E-15 65533 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 117.77 103.79 153700000 74936000 0 3753100 3604900 0 9525900 2776700 4667900 5927500 5730100 6925200 12799000 4407500 4701700 13950000 11317 1733 10319 95927;95928;95929;95930;95931;95932;95933;95934;95935;95936;95937;95938;95939 76536;76537;76538;76539;76540;76541;76542;76543;76544;76545;76546;76547;76548;76549 76541 13 EFEEESKQPGVSEQQR Unmodified 1905.8704 0.87044898 583 O94776 MTA2 Metastasis-associated protein MTA2 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 27.642 27.394 3 0.005605 29652 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 38.995 29.459 3343100 0 0 0 3343100 0 0 0 0 0 0 0 0 0 0 0 11318 583 10320 95940;95941 76550;76551 76551 2 EFEELIDSNHDGIVTAEELESYMDPMNEYNALNEAK Unmodified 4158.8198 0.81980148 4110 Q9BRK5 SDF4 45 kDa calcium-binding protein yes yes 0 0 0 By MS/MS 2 0 1 1 98.803 90.673 3 5.8685E-51 116948 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 92.238 87.879 14249000 14249000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11319 4110 10321 95942 76552;76553 76552 2 EFEETMDALQADIDQLEAEK Unmodified 2324.0366 0.036587605 2391 Q14203 DCTN1 Dynactin subunit 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 97.862 90.851 2;3 5.6672E-107 115780 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 128.94 126.85 69209000 46547000 22661000 0 0 0 0 0 0 0 0 0 0 0 0 0 11320 2391 10322 95943;95944;95945 76554;76555;76556 76555 2 EFEEYIRDK Unmodified 1227.5772 0.57716749 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 44.33 44.667 3 0.017426 50022 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 43.308 37.524 53418000 0 0 0 0 0 0 0 7993400 0 8408900 0 19772000 8831500 8412200 0 11321 213 10323 95946;95947;95948;95949;95950 76557;76558;76559 76557 3 EFEFLMR Unmodified 970.45824 0.45823833 2019 P85037 FOXK1 Forkhead box protein K1 yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 80.32 80.247 2 0.023412 92374 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.512 39.467 10346000 0 0 0 704030 731860 2081900 0 0 0 0 0 0 0 2159100 4669500 11322 2019 10324 95951;95952;95953;95954;95955 76560;76561 76560 2 EFEFSQLPLK Unmodified 1236.639 0.63903946 5240 Q9Y5M8 SRPRB Signal recognition particle receptor subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 83.629 83.692 2 0.00091675 97015 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 114.28 101.01 139990000 0 0 0 3439400 4458900 9101400 12315000 9876800 11407000 16978000 13441000 17974000 10848000 12220000 17928000 11323 5240 10325 95956;95957;95958;95959;95960;95961;95962;95963;95964;95965;95966;95967 76562;76563;76564;76565;76566;76567;76568;76569;76570;76571;76572 76570 10 EFEGLLAQMR Unmodified 1192.591 0.59104341 5054 Q9UPQ0 LIMCH1 LIM and calponin homology domains-containing protein 1 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 80.316 80.41 2 0.0011825 92595 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 109.01 71.454 30058000 0 0 0 0 954110 2478200 1026400 3002800 0 2906000 2851600 3536100 2219400 0 11083000 11324 5054 10326 95968;95969;95970;95971;95972;95973;95974;95975;95976;95977 76573;76574;76575;76576;76577;76578;76579 76575 7 EFEGLLAQMR Oxidation (M) 1208.586 0.58595803 5054 Q9UPQ0 LIMCH1 LIM and calponin homology domains-containing protein 1 yes yes 0 1 0 By MS/MS 10 0 1 1 65.165 64.647 2 0.01842 74618 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 43.808 24.021 5744500 0 0 0 0 5744500 0 0 0 0 0 0 0 0 0 0 11325 5054 10326 95978 76580 76580 6403 1 EFENPEVPREDQQQQHQQR Unmodified 2421.1058 0.10576207 382 O60216 RAD21 Double-strand-break repair protein rad21 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 1 1 2 1 1 2 2 2 2 2 2 33.21 33.472 3;4 2.3356E-05 35661 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.827 59.388 202390000 0 0 0 10188000 6881200 18625000 13670000 9151000 9004600 18183000 25517000 21034000 20338000 20095000 29699000 11326 382 10327 95979;95980;95981;95982;95983;95984;95985;95986;95987;95988;95989;95990;95991;95992;95993;95994;95995;95996;95997 76581;76582;76583;76584;76585;76586;76587;76588;76589;76590;76591;76592;76593;76594 76586 14 EFEPLLNWMK Oxidation (M) 1321.6377 0.63765925 1002 P14625 HSP90B1 Endoplasmin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 85.489 84.372 2 0.00035892 113601 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.83 110.32 502720000 27559000 231050000 24013000 8370100 7203200 42184000 11522000 15362000 10621000 19057000 16694000 14607000 11689000 15306000 47490000 11327 1002 10328 95998;95999;96000;96001;96002;96003;96004;96005;96006;96007;96008;96009;96010;96011;96012;96013;96014 76595;76596;76597;76598;76599;76600;76601;76602;76603;76604;76605;76606;76607;76608;76609;76610;76611;76612;76613 76601 1358 19 EFEPLLNWMK Unmodified 1305.6427 0.64274463 1002 P14625 HSP90B1 Endoplasmin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 4.83 3.67 3 1 2 1 3 1 1 95.247 92.723 2 0.00091496 114875 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 135.77 106.62 484870000 0 469610000 0 0 0 1279400 0 0 0 0 0 0 0 0 13984000 11328 1002 10328 96015;96016;96017;96018;96019;96020 76614;76615;76616;76617;76618 76614 5 EFEPLLR Unmodified 902.48617 0.48616764 276 O15357 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.438 64.529 2 0.050145 72752 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.978 8.2138 82279000 0 0 0 4147600 4555400 6452400 5087400 5824200 4208000 8460900 6245100 9756000 8018400 7792700 11730000 11329 276 10329 96021;96022;96023;96024;96025;96026;96027;96028;96029;96030;96031;96032 76619 76619 1 EFEQIDK Unmodified 907.42871 0.42871234 1068 P18031 PTPN1 Tyrosine-protein phosphatase non-receptor type 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 26.757 27.119 2 0.050025 27989 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.148 13.558 28066000 0 0 0 0 4687100 0 0 0 0 0 5088200 6478800 6268100 0 5543900 11330 1068 10330 96033;96034;96035;96036;96037 76620 76620 1 EFESLQVLPEIK Unmodified 1430.7657 0.76569654 3497 Q8TD26 CHD6 Chromodomain-helicase-DNA-binding protein 6 yes yes 0 0 0 By MS/MS 2 0 1 1 89.97 85.097 2 0.010937 105789 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 63.073 44.095 13558000 0 13558000 0 0 0 0 0 0 0 0 0 0 0 0 0 11331 3497 10331 96038 76621 76621 1 EFETIERDER Unmodified 1322.6103 0.61025853 2179 Q10570 CPSF1 Cleavage and polyadenylation specificity factor subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.388 31.575 3 0.0078722 33111 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 51.436 28.408 88839000 0 0 0 5529400 6294900 6225200 5838700 6951600 4505600 6675200 7974700 10017000 11238000 7828900 9759800 11332 2179 10332 96039;96040;96041;96042;96043;96044;96045;96046;96047;96048;96049;96050 76622;76623;76624;76625;76626;76627;76628 76625 6 EFETPEK Unmodified 878.40216 0.40216323 5125 Q9Y2X3 NOP58 Nucleolar protein 58 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.331 21.535 2 0.04445 22454 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 66.799 52.386 100390000 0 0 0 5499300 5079500 7726300 7210700 8207200 7960200 11227000 14681000 10780000 7090500 6160300 8763800 11333 5125 10333 96051;96052;96053;96054;96055;96056;96057;96058;96059;96060;96061;96062 76629 76629 1 EFEVYGPIK Unmodified 1080.5492 0.54916182 868 P08621 SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 66.808 66.88 2 0.0037643 76695 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 96.253 83.294 983010000 0 0 0 50293000 69219000 0 102380000 98987000 79481000 112460000 0 130160000 75991000 98238000 165800000 11334 868 10334 96063;96064;96065;96066;96067;96068;96069;96070;96071;96072 76630;76631;76632;76633;76634;76635;76636;76637;76638 76637 7 EFEWNLK Unmodified 964.46543 0.46543219 4251 Q9BYJ9 YTHDF1 YTH domain-containing family protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 70.216 70.248 2 0.046463 80653 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 65.897 39.101 28215000 0 0 0 1764700 1847000 0 3549800 0 2990000 4792700 4517100 2502300 2815600 3435700 0 11335 4251 10335 96073;96074;96075;96076;96077;96078;96079;96080;96081 76639;76640 76640 2 EFFPLDESGNVVPSDTNILDTWAAMEELVDEGLVK Unmodified 3878.8448 0.84481766 1013 P15121 AKR1B1 Aldose reductase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 3 2 1 104.72 99.601 3 4.7367E-119 124788 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 138.09 136.45 668790000 531570000 133780000 3442700 0 0 0 0 0 0 0 0 0 0 0 0 11336 1013 10336 96082;96083;96084;96085;96086;96087 76641;76642;76643;76644;76645;76646;76647;76648;76649;76650;76651 76649 11 EFFPLDESGNVVPSDTNILDTWAAMEELVDEGLVK Oxidation (M) 3894.8397 0.83973228 1013 P15121 AKR1B1 Aldose reductase yes yes 0 1 0 By MS/MS By MS/MS 2 0 3 2 1 102.51 95.516 3 2.9155E-27 119708 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.273 59.651 60460000 46014000 14446000 0 0 0 0 0 0 0 0 0 0 0 0 0 11337 1013 10336 96088;96089;96090 76652;76653 76652 1401 1 EFFQIDGYVTDHIEVVQDHSALFK Unmodified 2836.3708 0.37081011 3813 Q96EK5 KIAA1279 KIF1-binding protein yes yes 0 0 0 By MS/MS 2 0 1 1 96.867 88.737 4 2.3831E-24 114630 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.41 98.156 33354000 33354000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11338 3813 10337 96091 76654 76654 1 EFGATECINPQDFSK Unmodified 1741.7618 0.76175015 955 P11766 ADH5 Alcohol dehydrogenase class-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.3 3.85 5 1 4 1 4 1 1 1 1 1 74.232 71.652 2 7.2686E-117 85917 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 226.33 213.38 3379000000 35728000 3236400000 9380100 0 0 0 0 0 0 0 14843000 22305000 0 15206000 45126000 11339 955 10338 96092;96093;96094;96095;96096;96097;96098;96099;96100;96101 76655;76656;76657;76658;76659;76660;76661;76662;76663;76664;76665;76666;76667;76668 76663 14 EFGDQAEAAQDATLTTTTFQNEDEK Unmodified 2759.2046 0.20459222 4079 Q9BPX3 NCAPG Condensin complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8 3.33 2 2 11 1 3 1 1 1 1 1 1 1 1 1 1 1 74.421 73.36 2;3 7.1228E-126 89561 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 214.54 205.26 224510000 496210 106560000 0 0 9017600 14752000 5113600 6935400 6517800 13137000 11617000 17349000 4013400 6800800 22204000 11340 4079 10339 96102;96103;96104;96105;96106;96107;96108;96109;96110;96111;96112;96113;96114;96115;96116 76669;76670;76671;76672;76673;76674;76675;76676;76677;76678;76679;76680;76681 76674 13 EFGDSLSLEILQIIK Unmodified 1703.9346 0.93455278 4895 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 yes yes 0 0 0 By MS/MS 2 0 1 1 102.22 94.087 2 0.00052613 121036 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.767 79.623 21332000 21332000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11341 4895 10340 96117 76682 76682 1 EFGEQEVDLVNCR Unmodified 1593.7093 0.70932065 5193 Q9Y4C1 KDM3A Lysine-specific demethylase 3A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.227 67.308 2 0.00045577 77068 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 94.297 85.32 85789000 0 0 0 3410000 5402600 7804400 6321300 7822800 7501200 7987300 7625100 9458900 6013600 6723600 9718500 11342 5193 10341 96118;96119;96120;96121;96122;96123;96124;96125;96126;96127;96128;96129 76683;76684;76685;76686;76687;76688;76689;76690;76691;76692;76693;76694;76695 76689 13 EFGFSGLNVK Unmodified 1096.5553 0.55530983 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 77.12 76.592 2 0.0019165 87979 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 87.696 59.442 186610000 0 23144000 3721300 7662600 8321800 16236000 10970000 20891000 12483000 18831000 14982000 20211000 15414000 13738000 0 11343 2361 10342 96130;96131;96132;96133;96134;96135;96136;96137;96138;96139;96140;96141;96142 76696;76697;76698;76699;76700;76701;76702;76703;76704;76705;76706;76707 76700 12 EFGGGHIK Unmodified 843.4239 0.42390173 2190;2884 Q12792;Q6IBS0 TWF1;TWF2 Twinfilin-1;Twinfilin-2 no no 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 18.848 15.284 2 0.037509 22494 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.715 53.948 395220000 175150000 92961000 127120000 0 0 0 0 0 0 0 0 0 0 0 0 11344 2190;2884 10343 96143;96144;96145 76708 76708 1 EFGLLKPTSAR Unmodified 1217.6768 0.67682195 2456 Q14966 ZNF638 Zinc finger protein 638 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 52.467 52.822 3 0.0088587 59939 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 36.447 29.279 139400000 0 0 0 0 0 16207000 0 0 0 26124000 13363000 34309000 20389000 7957600 21050000 11345 2456 10344 96146;96147;96148;96149;96150;96151;96152 76709;76710;76711;76712 76710 4 EFGNPNRPVASTR Unmodified 1443.7219 0.72187466 4939 Q9UJK0 TSR3 Ribosome biogenesis protein TSR3 homolog yes yes 0 0 1 By matching By MS/MS By matching 10 0 3 1 1 1 25.704 26.029 3 0.031848 27586 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 30.998 9.7682 12325000 0 0 0 0 0 0 0 2198900 0 0 4991500 0 0 5134300 0 11346 4939 10345 96153;96154;96155 76713 76713 1 EFGPVVIDYGK Unmodified 1222.6234 0.6233894 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 2 2 1 1 1 1 1 1 1 1 1 1 1 1 76.3 75.059 2 0.0016512 87090 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 71.349 64.07 1219100000 29384000 712060000 16294000 20963000 27970000 45927000 29287000 34361000 31633000 44790000 41003000 52836000 37179000 39488000 55950000 11347 2392 10346 96156;96157;96158;96159;96160;96161;96162;96163;96164;96165;96166;96167;96168;96169;96170;96171;96172 76714;76715;76716;76717;76718;76719;76720;76721;76722;76723;76724;76725;76726;76727 76720 10 EFGSMVLELNASDDR Oxidation (M) 1697.7567 0.75666477 1424 P40937 RFC5 Replication factor C subunit 5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 74.326 74.437 2 0.00083395 85854 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 57.164 49.13 21927000 0 0 0 0 0 3283200 0 0 0 3633000 4150600 0 6012600 4847600 0 11348 1424 10347 96173;96174;96175;96176;96177;96178 76728;76729;76730;76731;76732;76733 76729 2241 5 EFGSVNGDNK Unmodified 1065.4727 0.47270242 4321 Q9H0B6 KLC2 Kinesin light chain 2 yes yes 0 0 0 By MS/MS 2 0 1 1 19.772 16.197 2 0.033517 21345 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 57.59 1.9135 10654000 0 10654000 0 0 0 0 0 0 0 0 0 0 0 0 0 11349 4321 10348 96179 76734 76734 1 EFGTNIK Unmodified 807.41267 0.41266834 1002 P14625;Q58FF3 HSP90B1;HSP90B2P Endoplasmin;Putative endoplasmin-like protein yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29.804 29.018 2 0.023018 31703 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 103.29 41.289 4441700000 140220000 2996600000 117240000 71521000 49060000 97499000 75332000 61770000 46005000 146890000 148410000 107720000 91955000 111370000 180170000 11350 1002 10349 96180;96181;96182;96183;96184;96185;96186;96187;96188;96189;96190;96191;96192;96193;96194 76735;76736;76737;76738;76739;76740;76741 76741 7 EFGVSPDK Unmodified 877.41815 0.41814765 1210 P26640 VARS Valine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 29.874 28.832 2 0.011003 31486 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 77.923 30.18 1558500000 55828000 1178900000 13237000 0 12320000 37197000 21290000 17461000 13896000 30791000 30144000 38339000 22934000 29864000 56261000 11351 1210 10350 96195;96196;96197;96198;96199;96200;96201;96202;96203;96204;96205;96206;96207;96208;96209 76742;76743;76744;76745;76746;76747;76748;76749;76750;76751;76752 76742 11 EFHAPLIIDENGVHELVK Unmodified 2059.0738 0.07384023 2599 Q16222 UAP1 UDP-N-acetylhexosamine pyrophosphorylase;UDP-N-acetylgalactosamine pyrophosphorylase;UDP-N-acetylglucosamine pyrophosphorylase yes yes 0 0 0 By MS/MS By MS/MS 2.4 0.49 3 2 3 2 86.498 80.91 3;4 8.2381E-08 103270 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.197 82.924 106410000 53968000 52438000 0 0 0 0 0 0 0 0 0 0 0 0 0 11352 2599 10351 96210;96211;96212;96213;96214 76753;76754;76755;76756;76757 76756 4 EFHEYLITEGK Unmodified 1364.6612 0.66123147 4378 Q9H3H1 TRIT1 tRNA dimethylallyltransferase, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 60.366 56.582 3 0.020873 70311 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 33.057 24.328 6726500 0 0 6726500 0 0 0 0 0 0 0 0 0 0 0 0 11353 4378 10352 96215 76758 76758 1 EFHGNIIK Unmodified 956.50797 0.50796571 3664 Q92804 TAF15 TATA-binding protein-associated factor 2N yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30.549 29.721 2 0.0043522 31583 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 111.01 78.537 482340000 163590000 20737000 37981000 23521000 13435000 14270000 17715000 15585000 17369000 26173000 28339000 17868000 31052000 25755000 28955000 11354 3664 10353 96216;96217;96218;96219;96220;96221;96222;96223;96224;96225;96226;96227;96228;96229;96230 76759;76760;76761;76762;76763;76764;76765;76766;76767;76768;76769;76770;76771;76772;76773;76774 76770 16 EFHIVQVSSSSK Unmodified 1346.683 0.68302954 5111 Q9Y2L5 TRAPPC8 Trafficking protein particle complex subunit 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 4 1 2 1 52.948 48.479 3 0.0032681 66485 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.429 38.235 178190000 136300000 22294000 19597000 0 0 0 0 0 0 0 0 0 0 0 0 11355 5111 10354 96231;96232;96233;96234 76775;76776 76775 2 EFHLNESGDPSSK Unmodified 1445.6423 0.64228694 2049;906 P0DME0;Q01105 SETSIP;SET Protein SETSIP;Protein SET no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.42 3.66 9 3 24 3 7 2 2 2 2 2 2 2 2 2 2 2 2 2 34.633 33.401 2;3 2.4268E-53 35666 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 237.53 214.21 15359000000 746220000 8368600000 376840000 268970000 268940000 244880000 290880000 284950000 235350000 332060000 872160000 855940000 497290000 574890000 1140700000 11356 906;2049 10355 96235;96236;96237;96238;96239;96240;96241;96242;96243;96244;96245;96246;96247;96248;96249;96250;96251;96252;96253;96254;96255;96256;96257;96258;96259;96260;96261;96262;96263;96264;96265;96266;96267;96268;96269;96270 76777;76778;76779;76780;76781;76782;76783;76784;76785;76786;76787;76788;76789;76790;76791;76792;76793;76794;76795;76796;76797;76798;76799;76800;76801;76802;76803;76804;76805;76806;76807;76808;76809;76810 76804 27 EFHMQHPSTCPAR Unmodified 1596.6926 0.69256515 4424 Q9H6T0 ESRP2 Epithelial splicing regulatory protein 2 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 28.224 28.509 3 0.0015183 29927 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 53.479 49.237 39692000 0 0 0 0 0 3157400 0 2799800 2667200 4313000 6542300 0 5013800 6799700 8398500 11357 4424 10356 96271;96272;96273;96274;96275;96276;96277;96278 76811 76811 1 EFHTTGLAWSK Unmodified 1275.6248 0.62478638 2055 Q01518 CAP1 Adenylyl cyclase-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.3 3.7 6 2 15 4 2 2 1 1 1 1 1 2 1 1 2 2 2 57.116 55.164 2;3 4.5096E-08 76575 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 167.12 132.87 1702200000 1158400000 145320000 190640000 9037100 0 19573000 9677800 8247200 6717300 21103000 17610000 13799000 15968000 16233000 69961000 11358 2055 10357 96279;96280;96281;96282;96283;96284;96285;96286;96287;96288;96289;96290;96291;96292;96293;96294;96295;96296;96297;96298;96299;96300;96301 76812;76813;76814;76815;76816;76817;76818;76819;76820;76821;76822 76820 10 EFIDACLNK Unmodified 1108.5223 0.52229515 4811 Q9P289 STK26 Serine/threonine-protein kinase 26 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 56.365 55.491 2 0.017618 62823 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 55.531 6.9693 114040000 0 79994000 0 0 0 3920100 3479500 0 2752500 3183100 5727300 0 3448900 3422400 8112300 11359 4811 10358 96302;96303;96304;96305;96306;96307;96308;96309;96310;96311 76823;76824;76825;76826;76827;76828;76829;76830 76828 8 EFIEFLK Unmodified 924.49567 0.49566969 4933 Q9UJ41 RABGEF1 Rab5 GDP/GTP exchange factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 81.759 80.678 2 0.031783 100957 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.029 69.364 30313000 0 11506000 5180700 964050 1049500 2758300 0 0 0 0 0 0 0 2781300 6072900 11360 4933 10359 96312;96313;96314;96315;96316;96317;96318 76831;76832 76831 2 EFIEGVSQFSVK Unmodified 1368.6925 0.6925316 1939 P63098 PPP3R1 Calcineurin subunit B type 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 6.12 3.89 3 1 4 1 2 1 1 1 1 1 78.714 76.473 2 1.529E-09 94592 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 148.56 121.08 513500000 17505000 445470000 17877000 0 0 0 0 0 0 0 5503800 5919600 0 2849700 18378000 11361 1939 10360 96319;96320;96321;96322;96323;96324;96325;96326 76833;76834;76835;76836;76837;76838;76839 76833 6 EFILMGGTVDTVELERAK Unmodified 2007.0347 0.034677532 2182 Q10713 PMPCA Mitochondrial-processing peptidase subunit alpha yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 89.058 83.208 3 0.0010653 85898 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 55.011 47.097 10793000 10793000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11362 2182 10361 96327;96328 76840;76841 76840 2 EFINLQSALESERR Unmodified 1690.8638 0.86384745 455 O75116 ROCK2 Rho-associated protein kinase 2 yes yes 0 0 1 By MS/MS 10 0 1 1 77.98 78.245 3 0.00053136 89992 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.813 32.959 8945100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8945100 11363 455 10362 96329 76842 76842 1 EFIQEPAK Unmodified 960.49165 0.49164694 208 O14744 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 8 1 1 1 1 1 1 1 1 34.976 35.269 2 0.0068886 38277 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 92.187 56.938 111730000 0 0 0 9565600 0 0 10878000 8292300 0 0 18700000 17583000 11439000 12658000 22609000 11364 208 10363 96330;96331;96332;96333;96334;96335;96336;96337 76843;76844;76845;76846;76847 76846 5 EFIYYADVK Unmodified 1146.5597 0.55972651 1648 P51151;Q9NP90 RAB9A;RAB9B Ras-related protein Rab-9A;Ras-related protein Rab-9B yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.642 67.725 2 0.022503 78211 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 58.981 46.453 243980000 0 0 0 16507000 13839000 15188000 15766000 22352000 14166000 26571000 30372000 25282000 25321000 13707000 24911000 11365 1648 10364 96338;96339;96340;96341;96342;96343;96344;96345;96346;96347;96348;96349 76848;76849;76850 76850 3 EFLALASSSLLK Unmodified 1277.7231 0.72310344 5094 Q9Y2A7 NCKAP1 Nck-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 89.034 87.417 2 9.9209E-13 106587 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 127.76 113.1 71325000 32085000 15280000 5541400 0 0 2430500 1188000 0 1286000 2943500 0 2240700 0 1849300 6480700 11366 5094 10365 96350;96351;96352;96353;96354;96355;96356;96357;96358;96359;96360;96361;96362 76851;76852;76853;76854;76855;76856;76857;76858;76859;76860;76861;76862;76863;76864;76865 76860 15 EFLDSLASK Unmodified 1008.5128 0.51277632 2656 Q2TAL8 QRICH1 Glutamine-rich protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63.485 62.335 2 0.0052093 71254 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 80.219 40.556 468620000 8108500 242110000 7617900 0 11279000 17273000 17572000 20666000 9699800 18111000 20975000 23724000 19823000 18393000 33269000 11367 2656 10366 96363;96364;96365;96366;96367;96368;96369;96370;96371;96372;96373;96374;96375;96376 76866;76867;76868;76869;76870;76871;76872;76873;76874;76875;76876 76872 11 EFLDYQLDELSR Unmodified 1526.7253 0.72528829 3078 Q7Z333 SETX Probable helicase senataxin yes yes 0 0 0 By MS/MS 10 0 1 1 82.812 83.008 2 0.011279 95765 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.398 50.617 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11368 3078 10367 96377 76877 76877 1 EFLFSPNDSASDIAK Unmodified 1639.773 0.77296676 625 O95164 UBL3 Ubiquitin-like protein 3 yes yes 0 0 0 By MS/MS 10 0 1 1 79.255 78.802 2 0.0015662 91481 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 50.914 40.605 7517100 0 0 0 7517100 0 0 0 0 0 0 0 0 0 0 0 11369 625 10368 96378 76878 76878 1 EFLHAQEEVK Unmodified 1228.6088 0.60880197 1482 P43686 PSMC4 26S protease regulatory subunit 6B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.67 3.57 7 2 21 2 4 3 2 2 2 1 1 2 2 3 3 1 1 1 37.36 36.03 2;3 8.8852E-28 38745 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 198.61 150.05 1992200000 133610000 511760000 346210000 60456000 69091000 117670000 23278000 24663000 30618000 139440000 181800000 213310000 29761000 26041000 84493000 11370 1482 10369 96379;96380;96381;96382;96383;96384;96385;96386;96387;96388;96389;96390;96391;96392;96393;96394;96395;96396;96397;96398;96399;96400;96401;96402;96403;96404;96405;96406;96407;96408 76879;76880;76881;76882;76883;76884;76885;76886;76887;76888;76889;76890;76891;76892;76893;76894;76895;76896;76897 76894 11 EFLHAQEEVKR Unmodified 1384.7099 0.709913 1482 P43686 PSMC4 26S protease regulatory subunit 6B yes yes 0 0 1 By MS/MS 10 0 1 1 29.244 29.948 3 0.037942 31944 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 24.599 15.405 5644900 0 0 0 0 0 0 0 0 0 0 0 5644900 0 0 0 11371 1482 10370 96409 76898 76898 1 EFLHNQGK Unmodified 971.48248 0.48247924 4394 Q9H4A4 RNPEP Aminopeptidase B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 16.438 13.016 2 0.013526 16488 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 97.473 67.9 875090000 581170000 48178000 245740000 0 0 0 0 0 0 0 0 0 0 0 0 11372 4394 10371 96410;96411;96412;96413 76899;76900;76901;76902 76900 3 EFLLSLDDSVDETEAVK Unmodified 1908.9204 0.92041886 4230 Q9BXP5 SRRT Serrate RNA effector molecule homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 6 2 4 3 1 90.446 85.92 2 7.9382E-183 107252 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 245.69 214.81 322040000 134900000 175160000 11987000 0 0 0 0 0 0 0 0 0 0 0 0 11373 4230 10372 96414;96415;96416;96417;96418;96419;96420;96421 76903;76904;76905;76906;76907;76908;76909;76910;76911;76912;76913 76903 11 EFLLSMANR Unmodified 1079.5434 0.54336494 2288 Q13427 PPIG Peptidyl-prolyl cis-trans isomerase G yes yes 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 74.96 74.977 2 0.017618 86504 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 55.531 7.7876 22253000 0 0 0 1009200 1232000 2748900 1529100 1225600 2206000 3929800 0 0 2587900 0 5784800 11374 2288 10373 96422;96423;96424;96425;96426;96427;96428;96429;96430 76914 76914 1 EFLLSMANR Oxidation (M) 1095.5383 0.53827956 2288 Q13427 PPIG Peptidyl-prolyl cis-trans isomerase G yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 56.419 56.616 2 0.036002 64346 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 41.029 11.653 25371000 0 0 0 0 3212500 5556000 0 0 0 0 0 7018700 6032100 0 3551300 11375 2288 10373 96431;96432;96433;96434;96435 76915 76915 1 EFLMNTLNQSDTK Unmodified 1539.7239 0.72390808 602 O94913 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 68.9 69.182 2 6.9584E-05 78562 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 106.62 66.464 92875000 0 0 0 0 0 0 0 0 0 17371000 0 23243000 8692800 0 43567000 11376 602 10374 96436;96437;96438;96439 76916;76917;76918;76919 76917 4 EFLMNTLNQSDTK Oxidation (M) 1555.7188 0.7188227 602 O94913 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 yes yes 0 1 0 By MS/MS 3 0 1 1 58.566 53.729 2 0.038417 66211 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 42.395 26.823 2331500 0 2331500 0 0 0 0 0 0 0 0 0 0 0 0 0 11377 602 10374 96440 76920 76920 1 EFLPEGQDIGAFVAEQK Unmodified 1876.9207 0.92069363 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.29 6 1 24 1 4 2 2 2 2 2 2 2 2 2 2 2 2 2 85.866 85.081 2;3 1.2852E-70 99172 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 175.48 154.64 3484700000 33820000 1748300000 30612000 22276000 86068000 99951000 61384000 126630000 119430000 232690000 161520000 212540000 61116000 129630000 358790000 11378 2102 10375 96441;96442;96443;96444;96445;96446;96447;96448;96449;96450;96451;96452;96453;96454;96455;96456;96457;96458;96459;96460;96461;96462;96463;96464;96465;96466;96467;96468;96469;96470;96471 76921;76922;76923;76924;76925;76926;76927;76928;76929;76930;76931;76932;76933;76934;76935;76936;76937;76938;76939;76940 76938 18 EFLQINSLGK Unmodified 1147.6237 0.62372375 903 P0CG30;P0CG29 GSTT2B;GSTT2 Glutathione S-transferase theta-2B;Glutathione S-transferase theta-2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 6 4 3 3 1 1 1 1 1 1 76.596 74.14 2 9.6154E-05 93143 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 141.2 88.029 241000000 10806000 207620000 4748500 0 0 0 0 0 0 0 2642900 4412600 0 0 10771000 11379 903 10376 96472;96473;96474;96475;96476;96477 76941;76942;76943 76941 2 EFLQQQYR Unmodified 1110.5458 0.54580778 354 O43683 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 yes yes 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.563 41.741 2 0.0074285 45383 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.673 61.567 51299000 0 0 0 2381000 2065900 3169300 3335600 4134800 2414500 4747500 7347000 5245200 4823300 4498500 7136800 11380 354 10377 96478;96479;96480;96481;96482;96483;96484;96485;96486;96487;96488;96489 76944;76945;76946 76944 3 EFLRANSPTMDK Unmodified 1407.6816 0.68164933 664 O95466 FMNL1 Formin-like protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 48.935 41.109 3 0.028351 56989 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 41.48 25.13 18592000 18592000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11381 664 10378 96490 76947 76947 1 EFLSNPPAGFPSSR Unmodified 1504.731 0.73104237 2426 Q14674 ESPL1 Separin yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 72.925 73.066 2 0.040482 83256 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 30.55 12.282 11923000 0 0 0 0 0 0 0 0 2825000 0 0 0 4663900 4433800 0 11382 2426 10379 96491;96492;96493 76948 76948 1 EFLVAGGEDFK Unmodified 1210.587 0.58700389 5167 Q9Y3F4 STRAP Serine-threonine kinase receptor-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 7.62 3.58 3 1 9 1 2 1 1 2 1 1 1 1 1 1 71.632 70.735 2 0.00027424 81483 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 90.906 66.95 1123400000 138090 839130000 64033000 0 0 0 0 9849100 6641500 0 39454000 40950000 14735000 25286000 83202000 11383 5167 10380 96494;96495;96496;96497;96498;96499;96500;96501;96502;96503;96504;96505;96506 76949;76950;76951;76952;76953;76954;76955;76956;76957;76958;76959;76960;76961;76962;76963;76964;76965;76966 76966 15 EFMPPGLQELIPFVK Oxidation (M) 1759.9219 0.92187961 1580 P49591 SARS Serine--tRNA ligase, cytoplasmic yes yes 0 1 0 By MS/MS 2 0 1 1 100.56 95.843 2 0.009325 118530 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 52.247 38.813 11726000 0 11726000 0 0 0 0 0 0 0 0 0 0 0 0 0 11384 1580 10381 96507 76967 76967 2547 1 EFMPPGLQELIPFVK Unmodified 1743.927 0.92696498 1580 P49591 SARS Serine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS 2 0 1 1 102.14 97.427 2 0.018722 120343 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 54.486 35.171 14105000 0 14105000 0 0 0 0 0 0 0 0 0 0 0 0 0 11385 1580 10381 96508 76968 76968 1 EFMWALK Oxidation (M) 939.45242 0.45242467 1803 P58546 MTPN Myotrophin yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 78.814 73.367 2 0.026805 89520 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 91.584 60.866 59022000 10074000 0 48948000 0 0 0 0 0 0 0 0 0 0 0 0 11386 1803 10382 96509;96510 76969;76970 76969 2 EFMWALK Unmodified 923.45751 0.45751004 1803 P58546 MTPN Myotrophin yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 79.506 79.653 2 0.044016 92093 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 66.994 49.227 58112000 0 0 0 0 0 2672900 1351800 1834000 0 2528300 6532200 6156400 0 5170600 31866000 11387 1803 10382 96511;96512;96513;96514;96515;96516;96517;96518 76971 76971 1 EFNAEVHRK Unmodified 1128.5676 0.56760585 1508 P46777 RPL5 60S ribosomal protein L5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12.068 11.461 2 0.0016791 17449 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 149.19 118.18 221810000 124510000 12070000 8917400 8779000 2244800 4330800 4135000 3317500 3462800 6055900 0 11751000 10513000 7492100 14226000 11388 1508 10383 96519;96520;96521;96522;96523;96524;96525;96526;96527;96528;96529;96530;96531;96532 76972;76973;76974;76975;76976;76977;76978;76979 76975 6 EFNEDGALAVLQQFK Unmodified 1707.8468 0.84680041 407 O60506 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.5 2.93 4 1 1 1 3 1 1 95.295 91.582 2 5.5411E-131 114102 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 291.24 269.87 413970000 34277000 369370000 4328100 0 0 0 0 0 0 0 0 0 0 0 5990300 11389 407 10384 96533;96534;96535;96536;96537;96538 76980;76981;76982;76983;76984 76980 5 EFNTQLAQK Unmodified 1077.5455 0.54547343 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 34.116 34.279 2 0.020015 37723 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 83.753 55.534 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11390 2291 10385 96539;96540;96541;96542;96543;96544 76985;76986;76987;76988;76989;76990 76989 6 EFPDVLECTVSHAVEK Unmodified 1858.8771 0.87711426 1541 P48507 GCLM Glutamate--cysteine ligase regulatory subunit yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 81.842 81.94 3 6.4136E-07 94481 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.14 71.939 56695000 0 0 0 0 1108100 7659500 1841600 3703400 0 8606400 6582900 8078200 0 2962000 16152000 11391 1541 10386 96545;96546;96547;96548;96549;96550;96551;96552;96553 76991;76992;76993;76994;76995;76996 76993 5 EFPELVAR Unmodified 959.50763 0.50763136 705 O95905 ECD Protein SGT1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 65.165 65.221 2 0.029645 74501 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 56.011 18.917 53164000 0 0 0 0 5325500 8217600 8253200 7299600 5740300 8985300 9342400 0 0 0 0 11392 705 10387 96554;96555;96556;96557;96558;96559;96560 76997 76997 1 EFPELVARIEDNDGEFLLIEAADFLPK Unmodified 3089.5597 0.55973309 705 O95905 ECD Protein SGT1 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 103.55 98.056 3 1.7292E-10 122920 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.728 62.184 32339000 29279000 3060000 0 0 0 0 0 0 0 0 0 0 0 0 0 11393 705 10388 96561;96562;96563 76998;76999;77000;77001 77000 4 EFPGFLENQK Unmodified 1207.5873 0.58733824 1820 P60903 S100A10 Protein S100-A10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.91 3.42 2 1 8 2 1 1 1 1 1 1 1 1 1 73.308 72.175 2 0.0056762 82570 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 67.993 51.79 156390000 0 100030000 3408400 12257000 3812500 0 4800300 10793000 0 0 8238700 0 7286000 5765500 0 11394 1820 10389 96564;96565;96566;96567;96568;96569;96570;96571;96572;96573;96574 77002;77003;77004;77005;77006;77007;77008;77009;77010;77011;77012;77013 77003 10 EFPGLAGVK Unmodified 916.50182 0.5018177 3402 Q8NBS9 TXNDC5 Thioredoxin domain-containing protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.074 63.169 2 0.021281 71964 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 52.403 26.576 254810000 0 0 0 9501600 7127100 22472000 12569000 10983000 7603700 14248000 36804000 28152000 13445000 21694000 70211000 11395 3402 10390 96575;96576;96577;96578;96579;96580;96581;96582;96583;96584;96585;96586 77014;77015;77016;77017;77018;77019;77020;77021;77022 77017 9 EFQALIVK Unmodified 946.54877 0.54876789 5193 Q9Y4C1 KDM3A Lysine-specific demethylase 3A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 65.078 65.148 2 0.006533 74260 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 100.07 44.625 87117000 0 0 0 5908200 7332600 7802000 9265900 8854100 7076400 8524200 9582500 10880000 0 0 11891000 11396 5193 10391 96587;96588;96589;96590;96591;96592;96593;96594;96595;96596 77023;77024;77025;77026;77027;77028;77029;77030;77031 77030 9 EFQASPLLLPVPTQVPQPVGR Unmodified 2272.258 0.25795261 434 O60826 CCDC22 Coiled-coil domain-containing protein 22 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 2 2 1 2 1 2 2 2 93.625 93.752 2;3 1.8917E-05 108807 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.607 50.654 44530000 0 0 0 0 0 3610500 0 3168200 1282800 11506000 3241100 6423900 0 2812000 12486000 11397 434 10392 96597;96598;96599;96600;96601;96602;96603;96604;96605;96606;96607;96608;96609;96610 77032;77033;77034;77035;77036;77037;77038;77039 77034 8 EFQEAGEPITDDSTSLHK Unmodified 2002.912 0.91197944 4102 Q9BQS8 FYCO1 FYVE and coiled-coil domain-containing protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 54.698 49.355 3 0.00098712 63762 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 32.511 25.783 41636000 0 41636000 0 0 0 0 0 0 0 0 0 0 0 0 0 11398 4102 10393 96611;96612 77040 77040 1 EFQECVECFERSVK Unmodified 1845.8026 0.80256911 2933 Q6P3X3 TTC27 Tetratricopeptide repeat protein 27 yes yes 0 0 1 By MS/MS 2 0 1 1 74.36 71.408 3 0.0167 87202 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 41.227 33.996 3396300 0 0 3396300 0 0 0 0 0 0 0 0 0 0 0 0 11399 2933 10394 96613 77041 77041 1 EFQLFSSPHGK Unmodified 1275.6248 0.62478638 763 P02787 TF Serotransferrin yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching 10 0 5 1 1 1 1 1 60.342 60.331 3 0.031625 69815 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 26.412 20.406 35483000 0 0 0 9285700 0 0 843190 20176000 0 2954800 0 0 2223200 0 0 11400 763 10395 96614;96615;96616;96617;96618 77042 77042 1 EFQQPSQITESTIHEIPTK Unmodified 2212.1012 0.10117719 2759 Q5SW79 CEP170 Centrosomal protein of 170 kDa yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 2 2 1 1 1 1 1 1 1 1 1 1 72.871 72.058 3 3.3458E-07 89960 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.748 76.752 355860000 0 211160000 4705300 5719300 12810000 0 12077000 10470000 0 19943000 14419000 17027000 9355900 14739000 23428000 11401 2759 10396 96619;96620;96621;96622;96623;96624;96625;96626;96627;96628;96629;96630;96631;96632 77043;77044;77045;77046;77047;77048;77049 77044 6 EFQQYLPVVMGPLMK 2 Oxidation (M) 1810.8998 0.89976395 149 O00410 IPO5 Importin-5 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 17 2 1 2 1 2 2 2 2 1 2 84.063 84.199 2;3 1.1976E-14 97467 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 99.283 87.417 298920000 0 0 0 0 0 51009000 11275000 23351000 9968700 48861000 33849000 29346000 12479000 6856400 71923000 11402 149 10397 96633;96634;96635;96636;96637;96638;96639;96640;96641;96642;96643;96644;96645;96646;96647;96648;96649 77050;77051;77052;77053;77054;77055;77056;77057;77058;77059;77060;77061 77052 198;199 12 EFQQYLPVVMGPLMK Oxidation (M) 1794.9048 0.90484933 149 O00410 IPO5 Importin-5 yes yes 0 1 0 By MS/MS By MS/MS 4.67 3.77 2 1 2 1 93.88 90.683 2;3 0.0004183 112445 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.944 65.506 46226000 0 43091000 0 0 0 0 0 0 0 0 0 0 0 0 3135000 11403 149 10397 96650;96651;96652 77062;77063;77064 77062 198;199 3 EFQSPDEEMK Oxidation (M) 1254.5074 0.50743294 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 21.892 22.133 2 0.0010007 23048 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 92.838 90.158 136860000 0 0 0 0 5821800 11637000 10841000 9948700 8739600 14813000 12853000 17740000 16659000 11446000 16358000 11404 516 10398 96653;96654;96655;96656;96657;96658;96659;96660;96661;96662;96663 77065;77066;77067;77068;77069;77070;77071;77072 77071 666 7 EFQSPDEEMK Unmodified 1238.5125 0.51251832 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.652 35.834 2 0.00071404 38278 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 121.05 114.31 218070000 0 0 0 5970600 8044300 14919000 9566900 17738000 10216000 16812000 25248000 20987000 22009000 27058000 39498000 11405 516 10398 96664;96665;96666;96667;96668;96669;96670;96671;96672;96673;96674;96675 77073;77074;77075;77076;77077;77078;77079;77080;77081;77082;77083;77084 77080 12 EFQSPDEEMKK Unmodified 1366.6075 0.60748134 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 28.17 28.118 3 0.047307 30231 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 25.014 21.153 31121000 0 0 0 2955500 7088100 2831600 8979700 0 2642400 6623400 0 0 0 0 0 11406 516 10399 96676;96677;96678;96679;96680;96681 77085 77085 1 EFRDYPPLR Unmodified 1191.6037 0.60365701 4756 Q9NZ01 TECR Very-long-chain enoyl-CoA reductase yes yes 0 0 1 By MS/MS 10 0 1 1 47.727 47.963 3 0.033693 53086 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 36.334 30.838 6227800 0 0 0 0 0 0 0 0 0 0 0 0 0 6227800 0 11407 4756 10400 96682 77086;77087 77087 2 EFRGDDGRGGGTGGPNHPPAPR Unmodified 2203.0267 0.026723892 1546 P48634 PRRC2A Protein PRRC2A yes yes 0 0 2 By MS/MS By MS/MS 10 0 2 1 1 20.971 21.613 4 0.0015673 21417 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 34.615 25.568 15478000 0 0 0 0 0 0 0 0 0 0 0 7194900 0 0 8283100 11408 1546 10401 96683;96684 77088;77089 77088 2 EFRGQENGLDGTK Unmodified 1449.6848 0.68482046 2380 Q14157 UBAP2L Ubiquitin-associated protein 2-like yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 22.029 22.237 2;3 2.4622E-11 22153 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 156.36 123.1 536330000 0 0 0 31945000 21575000 43415000 49535000 35592000 48183000 55840000 46898000 61418000 44189000 41426000 56315000 11409 2380 10402 96685;96686;96687;96688;96689;96690;96691;96692;96693;96694;96695;96696;96697;96698;96699;96700;96701;96702;96703;96704;96705;96706;96707;96708 77090;77091;77092;77093;77094;77095;77096;77097;77098;77099;77100;77101;77102;77103;77104 77094 13 EFRNPSIYEK Unmodified 1281.6354 0.63535107 4907 Q9UHR5 SAP30BP SAP30-binding protein yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 37.905 37.112 2;3 5.4204E-05 51586 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 140.83 86.678 249780000 18025000 0 20125000 13965000 9504600 14735000 13361000 13236000 12433000 24558000 21856000 22788000 18279000 17654000 29263000 11410 4907 10403 96709;96710;96711;96712;96713;96714;96715;96716;96717;96718;96719;96720;96721;96722;96723 77105;77106;77107;77108;77109;77110;77111;77112;77113;77114 77108 9 EFRPEDQPWLLR Unmodified 1584.8049 0.80487601 1351 P35269 GTF2F1 General transcription factor IIF subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 77.78 77.927 3 0.022535 89651 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 36.32 28.611 42514000 0 0 0 0 0 6186500 0 0 6033700 0 2954200 5111800 1989100 2588100 17650000 11411 1351 10404 96724;96725;96726;96727;96728;96729;96730 77115 77115 1 EFSADQMSENTDQSDAAELNHK Unmodified 2466.0241 0.024125438 4900 Q9UHF7 TRPS1 Zinc finger transcription factor Trps1 yes yes 0 0 0 By MS/MS 3 0 1 1 52.901 48.005 3 0.041352 59425 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 13.592 10.044 1152800 0 1152800 0 0 0 0 0 0 0 0 0 0 0 0 0 11412 4900 10405 96731 77116 77116 1 EFSFEAWNAK Unmodified 1227.556 0.55603812 1977 P78347 GTF2I General transcription factor II-I yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 77.925 77.933 2 0.0014192 89177 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 91.783 83.442 128040000 0 0 0 8122900 9789600 23749000 7623900 0 15282000 19739000 16586000 0 13410000 13737000 0 11413 1977 10406 96732;96733;96734;96735;96736;96737;96738;96739;96740;96741;96742 77117;77118;77119;77120;77121;77122;77123;77124;77125;77126;77127;77128 77125 11 EFSFMDEEEEDEIRV Oxidation (M) 1918.7779 0.77785372 4383 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 yes yes 0 1 1 By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.64 2.9 1 1 9 1 1 1 1 1 1 1 1 1 1 1 81.098 80.096 2 6.0401E-30 99685 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 129.84 128.4 42399000 12102000 1920100 0 719820 2307900 2170100 0 1944400 2944900 5640900 3390200 4686700 0 0 4571900 11414 4383 10407 96743;96744;96745;96746;96747;96748;96749;96750;96751;96752;96753 77129;77130;77131;77132;77133 77131 5839 5 EFSFMDEEEEDEIRV Unmodified 1902.7829 0.7829391 4383 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 yes yes 0 0 1 By MS/MS 2 0 1 1 90.155 82.024 2 6.0469E-22 106531 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 121.02 119.04 18414000 18414000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11415 4383 10407 96754 77134;77135 77135 2 EFSGNPIK Unmodified 890.44978 0.44978213 1363 P35637 FUS RNA-binding protein FUS yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 33.01 32.268 2 0.005818 34241 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 105.39 80.392 2514100000 90805000 34627000 0 178130000 170410000 137720000 232050000 195080000 155050000 190270000 0 298720000 252900000 232850000 345520000 11416 1363 10408 96755;96756;96757;96758;96759;96760;96761;96762;96763;96764;96765;96766;96767 77136;77137;77138;77139;77140;77141;77142;77143;77144;77145;77146;77147 77143 9 EFSGYVESGLK Unmodified 1214.5819 0.58191851 1100 P20073 ANXA7 Annexin A7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 57.296 57.416 2 0.00025931 64362 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.584 72.606 214090000 0 0 0 12271000 8122600 25722000 13039000 15432000 7407800 21881000 23075000 14615000 14529000 20914000 37077000 11417 1100 10409 96768;96769;96770;96771;96772;96773;96774;96775;96776;96777;96778;96779 77148;77149;77150;77151;77152;77153;77154;77155;77156;77157;77158;77159;77160 77152 13 EFSPFGSITSAK Unmodified 1269.6241 0.62411768 2268 Q13310 PABPC4 Polyadenylate-binding protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 76.677 76.152 2 2.8065E-05 88315 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 98.943 92.047 1622500000 0 853880000 0 34573000 37722000 57195000 56723000 49960000 48383000 70609000 82610000 103080000 56447000 65100000 106210000 11418 2268 10410 96780;96781;96782;96783;96784;96785;96786;96787;96788;96789;96790;96791;96792;96793 77161;77162;77163;77164;77165;77166;77167 77167 6 EFSPFGTITSAK Unmodified 1283.6398 0.63976774 958 P11940 PABPC1 Polyadenylate-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 4 2 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 77.447 76.69 2 1.0438E-09 91938 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 123.75 86.19 5077700000 1986400 2822100000 63408000 95343000 105410000 157340000 141040000 138200000 138480000 231640000 208990000 276300000 171550000 200070000 325830000 11419 958 10411 96794;96795;96796;96797;96798;96799;96800;96801;96802;96803;96804;96805;96806;96807;96808;96809;96810;96811 77168;77169;77170;77171;77172;77173;77174;77175;77176;77177;77178;77179;77180;77181 77174 14 EFSQSFDAAMK Oxidation (M) 1275.5442 0.5441528 5235 Q9Y5K5 UCHL5 Ubiquitin carboxyl-terminal hydrolase isozyme L5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 42.71 42.201 2 1.8195E-06 53975 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.99 111.08 219510000 0 155150000 2957600 3855300 2481400 6555000 4554800 4435400 2363800 5224700 7187300 6628700 5799400 4540500 7773200 11420 5235 10412 96812;96813;96814;96815;96816;96817;96818;96819;96820;96821;96822;96823;96824;96825;96826 77182;77183;77184;77185;77186;77187;77188;77189;77190 77186 6637 9 EFSQSFDAAMK Unmodified 1259.5492 0.54923818 5235 Q9Y5K5 UCHL5 Ubiquitin carboxyl-terminal hydrolase isozyme L5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.15 3.37 3 10 1 1 1 1 1 2 1 1 1 1 1 1 59.633 57.413 2 1.2734E-09 73164 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145.72 133.95 459760000 8697000 394070000 2347800 4481500 4615900 0 0 0 0 0 0 15051000 0 7383300 23111000 11421 5235 10412 96827;96828;96829;96830;96831;96832;96833;96834;96835;96836;96837;96838;96839 77191;77192;77193;77194;77195;77196;77197;77198;77199;77200;77201;77202 77194 12 EFSQTLENEK Unmodified 1223.567 0.56699673 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 34.396 34.659 2 0.00090746 37614 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 128 71.448 86204000 0 0 0 0 3275800 0 4022700 5463600 4792000 7526400 18624000 12686000 9812200 5946900 14054000 11422 2446 10413 96840;96841;96842;96843;96844;96845;96846;96847;96848;96849 77203;77204;77205;77206;77207;77208;77209;77210;77211;77212;77213 77208 9 EFSSEARVRDVVTK Unmodified 1621.8424 0.84238373 2210 Q12931 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 0 0 2 By MS/MS 2 0 1 1 49.725 41.899 3 3.7848E-05 57748 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 100.19 74.865 45356000 45356000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11423 2210 10414 96850 77214 77214 1 EFSSESGVK Unmodified 968.44509 0.44509068 3908 Q96KM6 ZNF512B Zinc finger protein 512B yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 16.427 16.598 2 0.043067 15327 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.769 31.385 25096000 0 0 0 1625100 2335700 2825700 1828200 1809800 1567000 2437900 2288700 3492600 2393000 0 2492700 11424 3908 10415 96851;96852;96853;96854;96855;96856;96857;96858;96859;96860;96861 77215 77215 1 EFSTNNPFK Unmodified 1082.5033 0.50327426 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 0 0 By MS/MS 10 0 1 1 52.436 51.906 2 0.045277 59224 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 43.246 24.464 2423100 0 0 0 0 2423100 0 0 0 0 0 0 0 0 0 0 11425 2451 10416 96862 77216 77216 1 EFTAQNLGK Unmodified 1006.5084 0.50835964 279 O15372 EIF3H Eukaryotic translation initiation factor 3 subunit H yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36.663 35.796 2 0.0033336 39724 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 93.561 59.748 1031500000 20046000 564150000 6891600 19910000 20202000 31546000 24545000 23576000 17740000 46799000 47873000 51208000 38834000 37188000 80954000 11426 279 10417 96863;96864;96865;96866;96867;96868;96869;96870;96871;96872;96873;96874;96875;96876;96877 77217;77218;77219;77220;77221;77222;77223;77224;77225;77226;77227;77228;77229;77230 77219 8 EFTAWYSDMETPLK Unmodified 1716.7705 0.77052392 646 O95361;Q309B1 TRIM16;TRIM16L Tripartite motif-containing protein 16;Tripartite motif-containing protein 16-like protein yes no 0 0 0 By MS/MS 2 0 1 1 90.434 85.538 2 0.0018185 106292 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.913 76.467 18717000 0 18717000 0 0 0 0 0 0 0 0 0 0 0 0 0 11427 646 10418 96878 77231 77231 1 EFTDHQETQAELQK Unmodified 1702.7798 0.77984305 4630 Q9NSV4 DIAPH3 Protein diaphanous homolog 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.64 2.92 3 2 23 1 4 1 2 2 2 2 2 2 2 2 2 2 2 31.564 30.845 2;3 1.0115E-101 39560 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 223.31 147.08 869120000 5700800 125300000 0 25023000 47765000 72212000 69436000 60380000 67808000 62236000 58668000 99342000 66394000 61403000 47453000 11428 4630 10419 96879;96880;96881;96882;96883;96884;96885;96886;96887;96888;96889;96890;96891;96892;96893;96894;96895;96896;96897;96898;96899;96900;96901;96902;96903;96904;96905;96906 77232;77233;77234;77235;77236;77237;77238;77239;77240;77241;77242;77243;77244;77245 77234 10 EFTDYLFNK Unmodified 1175.5499 0.5498901 2144 Q07889;Q07890 SOS1;SOS2 Son of sevenless homolog 1;Son of sevenless homolog 2 yes no 0 0 0 By MS/MS 2 0 1 1 81.67 76.965 2 0.03066 95717 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.923 61.146 32641000 0 32641000 0 0 0 0 0 0 0 0 0 0 0 0 0 11429 2144 10420 96907 77246 77246 1 EFTEAVEAK Unmodified 1022.492 0.49204087 1343 P35232 PHB Prohibitin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 32.498 32.696 2 0.0050719 36121 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 84.498 58.604 39345000 0 0 0 5320200 3605300 0 3423600 4685100 0 3716700 3535100 7561900 3953500 0 3543900 11430 1343 10421 96908;96909;96910;96911;96912;96913;96914;96915;96916;96917;96918 77247;77248;77249;77250;77251;77252;77253;77254;77255;77256 77256 10 EFTGAHIDIDK Unmodified 1244.6037 0.60371659 472 O75179 ANKRD17 Ankyrin repeat domain-containing protein 17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 48.618 48.726 3 0.0051216 54568 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 42.629 32.32 95245000 0 0 0 4895900 5891600 11741000 6996000 7142800 10769000 9055600 10500000 11744000 7582200 8928200 0 11431 472 10422 96919;96920;96921;96922;96923;96924;96925;96926;96927;96928;96929 77257;77258;77259;77260;77261;77262;77263;77264;77265 77258 9 EFTGAQSGGPQQNPGVLDGPQK Unmodified 2211.0556 0.055623984 165 O00512 BCL9 B-cell CLL/lymphoma 9 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 54.825 52.885 3 3.0926E-07 66159 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.09 62.926 35508000 0 22878000 0 3742900 0 0 0 0 0 0 0 0 0 0 8887600 11432 165 10423 96930;96931;96932 77266;77267;77268;77269 77267 4 EFTLEFSR Unmodified 1027.4975 0.4974606 1041 P16615;O14983;Q93084 ATP2A2;ATP2A1;ATP2A3 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1;Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 yes no 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 73.56 73.762 2 0.036499 84978 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 51.854 35.701 17576000 0 0 0 0 0 0 0 0 0 0 4425100 5814800 7335700 0 0 11433 1041 10424 96933;96934;96935 77270 77270 1 EFTNQEAAEPK Unmodified 1262.5779 0.57789577 2661 Q32MZ4 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24.396 23.882 2 3.1899E-11 24905 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 155.84 134.9 314910000 25463000 80092000 0 9243100 8430100 10576000 11310000 10673000 9014900 14093000 25629000 32567000 17142000 18910000 41769000 11434 2661 10425 96936;96937;96938;96939;96940;96941;96942;96943;96944;96945;96946;96947;96948;96949 77271;77272;77273;77274;77275;77276;77277;77278;77279;77280;77281;77282;77283;77284;77285;77286;77287;77288 77281 18 EFTNVYIK Unmodified 1012.5229 0.52294707 958;2268 Q13310;P11940 PABPC4;PABPC1 Polyadenylate-binding protein 4;Polyadenylate-binding protein 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 3 1 1 1 1 1 1 1 1 1 1 1 1 55.798 54.803 1;2 0.0061831 61013 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 119.57 91.054 2522200000 0 748920000 0 92864000 109500000 133110000 128800000 136920000 106000000 181870000 171910000 166830000 145840000 175510000 224100000 11435 2268;958 10426 96950;96951;96952;96953;96954;96955;96956;96957;96958;96959;96960;96961;96962;96963;96964 77289;77290;77291;77292;77293;77294;77295;77296;77297;77298;77299;77300;77301;77302;77303;77304;77305;77306;77307;77308;77309 77298 21 EFTPYDYSQSDFK Unmodified 1625.6886 0.68856843 2062 Q01780 EXOSC10 Exosome component 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 70.415 70.027 2 2.9164E-06 86851 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.82 88.933 117120000 0 81837000 0 0 0 2734200 2653000 0 0 4286900 4368700 6446500 4362000 3448000 6980100 11436 2062 10427 96965;96966;96967;96968;96969;96970;96971;96972;96973 77310;77311;77312;77313;77314;77315;77316;77317;77318;77319 77313 10 EFTSHALDSHILDYYENPAIK Unmodified 2462.1754 0.17540477 4176 Q9BV44 THUMPD3 THUMP domain-containing protein 3 yes yes 0 0 0 By MS/MS 3 0 2 2 84.499 81.264 3;4 5.7265E-07 97333 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 70.555 63.524 15893000 0 15893000 0 0 0 0 0 0 0 0 0 0 0 0 0 11437 4176 10428 96974;96975 77320;77321;77322 77321 3 EFTVQIK Unmodified 863.47527 0.4752686 4517 Q9HCK8 CHD8 Chromodomain-helicase-DNA-binding protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 53.29 53.215 2 0.044016 60133 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.994 28.202 37089000 0 0 0 2984300 5931400 17763000 4274900 0 0 1963900 4171400 0 0 0 0 11438 4517 10429 96976;96977;96978;96979;96980;96981 77323 77323 1 EFVAVTGAEEDR Unmodified 1321.615 0.61500956 5046 Q9UNZ2 NSFL1C NSFL1 cofactor p47 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 47.299 47.693 2 0.016409 53117 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.939 53.802 5960100 0 0 0 0 0 1175000 0 0 0 0 0 0 0 0 4785100 11439 5046 10430 96982;96983 77324 77324 0 EFVEACLNK Unmodified 1108.5223 0.52229515 5279 Q9Y6E0 STK24 Serine/threonine-protein kinase 24;Serine/threonine-protein kinase 24 36 kDa subunit;Serine/threonine-protein kinase 24 12 kDa subunit no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 47.732 46.863 2 0.0085848 53111 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 69.198 16.795 80523000 0 45886000 0 0 0 0 0 0 2212500 4635700 4202800 7728400 4202500 2461300 9194000 11440 5279 10431 96984;96985;96986;96987;96988;96989;96990;96991;96992 77325;77326;77327;77328;77329 77328 5 EFVHLAGK Unmodified 899.4865 0.48650199 4961 Q9UKD1 GMEB2 Glucocorticoid modulatory element-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 42.422 37.184 2 0.0025595 51862 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 120.65 66.935 29059000 19437000 0 9622400 0 0 0 0 0 0 0 0 0 0 0 0 11441 4961 10432 96993;96994 77330;77331;77332 77331 3 EFVISDRK Unmodified 992.5291 0.52909508 2363 Q14019 COTL1 Coactosin-like protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 31.37 30.314 2 0.002794 38873 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 157.34 118.52 769170000 141280000 114290000 271060000 9040900 4996100 8224600 8871300 4189600 5075200 7705600 38930000 22259000 9102500 24280000 99861000 11442 2363 10433 96995;96996;96997;96998;96999;97000;97001;97002;97003;97004;97005;97006;97007;97008;97009;97010 77333;77334;77335;77336;77337;77338;77339 77335 2 EFVLLPAASELAHVK Unmodified 1622.9032 0.90319307 4273 Q9BZL6 PRKD2 Serine/threonine-protein kinase D2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 87.518 87.689 3 5.1081E-06 101450 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.261 62.854 15775000 0 0 0 0 0 0 0 1525800 1817300 3740500 1511300 0 0 0 7180300 11443 4273 10434 97011;97012;97013;97014;97015 77340;77341;77342 77341 3 EFVNPSLPREEK Unmodified 1443.7358 0.73579339 1396 P38398 BRCA1 Breast cancer type 1 susceptibility protein yes yes 0 0 1 By MS/MS 2 0 1 1 53.233 49.32 3 0.028054 61931 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 42.475 34.564 5925700 0 0 5925700 0 0 0 0 0 0 0 0 0 0 0 0 11444 1396 10435 97016 77343;77344 77344 2 EFVQLVCPDAGQQAGQVGFLNPNGSSQGK Unmodified 3031.4458 0.44578274 2199 Q12857 NFIA Nuclear factor 1 A-type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 86.56 86.242 3 7.533E-32 100128 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 81.346 74.471 106370000 0 17172000 0 0 0 3322800 4265900 4110800 5538000 16297000 9617200 9060600 4539400 5862800 26588000 11445 2199 10436 97017;97018;97019;97020;97021;97022;97023;97024;97025;97026;97027 77345;77346;77347;77348;77349;77350;77351;77352;77353;77354;77355;77356;77357 77350 13 EFVQSVPTK Unmodified 1033.5444 0.5444108 1586 P49703 ARL4D ADP-ribosylation factor-like protein 4D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.454 38.634 2 0.012192 42795 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 61.679 35.785 69685000 0 0 0 3792400 4272300 5416500 5847200 5535800 2908700 4710500 7426700 6251900 7675500 7053000 8794300 11446 1586 10437 97028;97029;97030;97031;97032;97033;97034;97035;97036;97037;97038;97039 77358;77359;77360;77361;77362;77363;77364;77365 77363 8 EFVSPSLTPPPAIAHPALPTIPERK Unmodified 2664.4639 0.46392264 582 O94763 URI1 Unconventional prefoldin RPB5 interactor 1 yes yes 0 0 1 By MS/MS 10 0 1 1 84.083 84.262 4 0.026835 97242 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 20.482 17.495 8050400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8050400 11447 582 10438 97040 77366 77366 0 EFVTAFK Unmodified 840.43815 0.43815481 982 P13667 PDIA4 Protein disulfide-isomerase A4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 54.01 54.147 2 0.028147 60017 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.847 53.81 69539000 0 0 0 3417100 3107100 5113100 3083200 4091800 4062300 4099200 9237800 5858200 4764800 5810500 16894000 11448 982 10439 97041;97042;97043;97044;97045;97046;97047;97048;97049;97050;97051;97052 77367 77367 1 EFVVIAPAAHSDAVLSESK Unmodified 1969.0157 0.015656649 2484 Q15042 RAB3GAP1 Rab3 GTPase-activating protein catalytic subunit yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 75.696 75.612 3 0.00017071 87273 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 53.554 44.27 34355000 0 0 0 2435100 2544700 9691100 0 5522300 0 7596400 0 0 6564800 0 0 11449 2484 10440 97053;97054;97055;97056;97057;97058 77368;77369;77370;77371 77369 4 EFYEVVQSQR Unmodified 1283.6146 0.61461563 496 O75419 CDC45 Cell division control protein 45 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 51.794 52.036 2 0.009776 58634 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 70.256 55.587 87050000 0 0 0 0 7136600 10440000 0 9484600 0 12529000 14612000 16594000 9901300 2258200 4094400 11450 496 10441 97059;97060;97061;97062;97063;97064;97065;97066;97067 77372;77373;77374;77375;77376;77377;77378;77379 77372 7 EFYGENIK Unmodified 998.47091 0.4709115 1665 P51648 ALDH3A2 Fatty aldehyde dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 41.293 41.438 2 0.023017 46922 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 60.682 30.07 47885000 0 0 0 12847000 0 0 6480200 0 0 7711000 0 0 0 10396000 10450000 11451 1665 10442 97068;97069;97070;97071;97072 77380;77381 77380 2 EFYGRGAPYNALTGK Unmodified 1642.8104 0.81035532 5020 Q9UMX5 NENF Neudesin yes yes 0 0 1 By MS/MS 2 0 1 1 68.027 59.732 3 0.00035126 79875 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.706 84.646 36032000 36032000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11452 5020 10443 97073 77382;77383 77383 2 EFYSLQASSEK Unmodified 1287.5983 0.59829686 3595 Q8WXW3 PIBF1 Progesterone-induced-blocking factor 1 yes yes 0 0 0 By MS/MS 2 0 1 1 54.533 48.728 2 0.014761 63155 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.006 51.485 9302900 0 9302900 0 0 0 0 0 0 0 0 0 0 0 0 0 11453 3595 10444 97074 77384 77384 1 EGAAEALAAGADIAEFSVGGMDFSLFK Unmodified 2673.2632 0.2632335 4751 Q9NYU2 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes yes 0 0 0 By MS/MS By matching 2.33 0.471 2 1 2 1 101.51 96.039 3 1.2467E-46 120505 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 108.57 101.03 39905000 31370000 8534900 0 0 0 0 0 0 0 0 0 0 0 0 0 11454 4751 10445 97075;97076;97077 77385;77386 77386 2 EGAAEALAAGADIAEFSVGGMDFSLFK Oxidation (M) 2689.2581 0.25814812 4751 Q9NYU2 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes yes 0 1 0 By MS/MS 2 0 1 1 99.908 91.777 3 6.4148E-56 118286 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 116.38 109.02 13128000 13128000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11455 4751 10445 97078 77387 77387 6124 1 EGAAEGPLDPSGYNPAK Unmodified 1671.774 0.77402939 1081 P18858 LIG1 DNA ligase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57.015 56.112 2 3.3569E-28 63945 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 129.84 123.45 240750000 6960400 22104000 0 12828000 11753000 19149000 14645000 10993000 9522800 20304000 28183000 24757000 15481000 14939000 29127000 11456 1081 10446 97079;97080;97081;97082;97083;97084;97085;97086;97087;97088;97089;97090;97091;97092 77388;77389;77390;77391;77392;77393;77394;77395;77396;77397;77398;77399;77400;77401 77389 14 EGAAGAGVAQAGPLVDGELLR Unmodified 1950.0171 0.017053633 2689 Q4V328 GRIPAP1 GRIP1-associated protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 1 1 2 82.041 82.103 2;3 5.023E-28 94736 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 132.08 119.31 87681000 0 0 0 1394200 2475300 5238000 2730700 2016600 4385100 4779200 0 14533000 2893700 5035500 42201000 11457 2689 10447 97093;97094;97095;97096;97097;97098;97099;97100;97101;97102;97103;97104;97105 77402;77403;77404;77405 77402 3 EGAAHAFAQYNLDQFTPVK Unmodified 2106.0171 0.017053633 1524 P47755 CAPZA2 F-actin-capping protein subunit alpha-2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 79.419 79.582 3 1.07E-16 91632 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.812 87.831 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11458 1524 10448 97106;97107 77406;77407 77407 2 EGAAHAFAQYNMDQFTPVK Oxidation (M) 2139.9684 0.96838888 1705 P52907 CAPZA1 F-actin-capping protein subunit alpha-1 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 1 1 1 1 1 1 2 1 2 2 64.516 64.639 3 2.7987E-13 74472 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 89.374 85.88 216670000 0 0 0 8546900 8371900 19434000 12492000 8126400 10165000 14987000 18832000 54917000 11500000 25681000 23617000 11459 1705 10449 97108;97109;97110;97111;97112;97113;97114;97115;97116;97117;97118;97119;97120;97121;97122 77408;77409;77410;77411;77412;77413;77414;77415;77416;77417;77418 77418 2753 7 EGAAHAFAQYNMDQFTPVK Unmodified 2123.9735 0.97347426 1705 P52907 CAPZA1 F-actin-capping protein subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 2 75.738 75.935 2;3 7.9658E-49 87098 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 134.82 132.96 144840000 0 0 0 0 0 0 0 9301900 0 12586000 11337000 16989000 6686900 10253000 77689000 11460 1705 10449 97123;97124;97125;97126;97127;97128;97129;97130;97131 77419;77420;77421;77422;77423;77424;77425;77426;77427 77420 9 EGAAPAAAPSFSER Unmodified 1359.6419 0.64189301 3938 Q96NU1 SAMD11 Sterile alpha motif domain-containing protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 43.516 43.694 2 7.3415E-08 47915 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.465 78.584 107520000 0 0 0 5601100 6969100 0 7716900 8456600 8162200 12290000 13840000 14234000 11256000 0 18994000 11461 3938 10450 97132;97133;97134;97135;97136;97137;97138;97139;97140;97141 77428;77429;77430;77431;77432;77433;77434;77435;77436 77430 9 EGAAPGAARPTAPNAQTPSHLGATLPVGQPVGGDPEVRK Unmodified 3770.9452 0.94523268 1245 P29353 SHC1 SHC-transforming protein 1 yes yes 0 0 2 By MS/MS 10 0 1 1 66.335 66.872 5 0.012645 75942 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 11.561 6.8 19626000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19626000 11462 1245 10451 97142 77437 77437 1 EGADEEEWVVAK Unmodified 1360.6147 0.61467521 4357 Q9H223 EHD4 EH domain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 55.07 54.623 2 4.1254E-07 68237 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.7 98.604 106190000 0 39185000 0 0 4604500 7575800 8526900 6419500 4115900 8804800 8405500 0 0 7375700 11174000 11463 4357 10452 97143;97144;97145;97146;97147;97148;97149;97150;97151;97152 77438;77439;77440;77441;77442;77443 77439 6 EGADFILLNFSFK Unmodified 1499.766 0.76603089 3122 Q7Z7E8 UBE2Q1 Ubiquitin-conjugating enzyme E2 Q1 yes yes 0 0 0 By MS/MS 2 0 1 1 99.912 91.781 2 0.014066 118289 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.171 70.951 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11464 3122 10453 97153 77444 77444 1 EGAEEIDRHVER Unmodified 1438.6801 0.68006943 2815 Q5VTL8 PRPF38B Pre-mRNA-splicing factor 38B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.287 20.52 3 1.1668E-09 20764 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 123.84 105.74 516040000 0 0 0 0 29551000 46975000 43603000 29716000 35646000 49415000 54006000 69895000 65142000 41271000 50824000 11465 2815 10454 97154;97155;97156;97157;97158;97159;97160;97161;97162;97163;97164;97165 77445;77446;77447;77448;77449;77450;77451;77452;77453;77454;77455;77456;77457;77458 77456 14 EGAENLRK Unmodified 915.47739 0.47739386 2604 Q16513 PKN2 Serine/threonine-protein kinase N2 yes yes 0 0 1 By matching By MS/MS 2 0 2 1 1 7.6735 4.2944 2 0.025757 6422 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.37 16.828 52374000 8986600 43388000 0 0 0 0 0 0 0 0 0 0 0 0 0 11466 2604 10455 97166;97167 77459 77459 0 EGAFSNFPISEETIK Unmodified 1667.8043 0.80426689 4588 Q9NR30 DDX21 Nucleolar RNA helicase 2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.64 2.9 1 1 9 2 1 1 1 1 1 1 1 1 1 81.154 80.862 2 5.4646E-30 99673 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 153.34 136.96 175980000 0 16629000 0 7348200 13069000 23728000 12174000 13728000 13646000 0 26204000 26670000 0 22779000 0 11467 4588 10456 97168;97169;97170;97171;97172;97173;97174;97175;97176;97177;97178 77460;77461;77462;77463;77464;77465;77466 77460 7 EGAGAVDEEDFIK Unmodified 1378.6252 0.62523989 3094 Q7Z460 CLASP1 CLIP-associating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 59.816 59.739 2 1.3433E-07 68151 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 115.57 104.74 53416000 0 0 0 0 16233000 0 17482000 19700000 0 0 0 0 0 0 0 11468 3094 10457 97179;97180;97181 77467;77468 77467 0 EGAIIVDPAR Unmodified 1039.5662 0.56620887 4387 Q9H3U1 UNC45A Protein unc-45 homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.791 48.951 2 0.0077573 55047 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 61.691 36.117 194350000 0 0 0 11297000 6475600 23146000 11420000 14996000 9263600 27650000 19583000 15250000 11784000 12499000 30986000 11469 4387 10458 97182;97183;97184;97185;97186;97187;97188;97189;97190;97191;97192;97193 77469;77470;77471;77472;77473;77474;77475;77476;77477;77478;77479;77480 77471 12 EGAIIVDPARELK Unmodified 1409.7878 0.78782897 4387 Q9H3U1 UNC45A Protein unc-45 homolog A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.24 3.75 5 1 11 2 2 2 1 1 1 1 1 1 1 1 1 1 1 67.102 65.22 2;3 0.0053836 80181 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 46.481 33.068 269510000 31569000 151760000 23494000 0 3386900 4754100 5125800 3554200 3776600 6443000 6485000 8544300 5482900 5391000 9747200 11470 4387 10459 97194;97195;97196;97197;97198;97199;97200;97201;97202;97203;97204;97205;97206;97207;97208;97209;97210 77481;77482;77483;77484;77485 77482 4 EGALCEENMR Oxidation (M) 1223.4911 0.49107137 980 P13639 EEF2 Elongation factor 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.491 15.661 2 0.00086549 14273 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.69 103.85 476620000 0 0 0 16659000 8090800 11333000 12117000 11047000 7668200 19002000 77935000 63580000 23629000 63719000 161840000 11471 980 10460 97211;97212;97213;97214;97215;97216;97217;97218;97219;97220;97221;97222 77486;77487;77488;77489;77490;77491;77492;77493;77494;77495;77496;77497 77490 1306 12 EGALCEENMR Unmodified 1207.4962 0.49615675 980 P13639 EEF2 Elongation factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 28.43 28.267 2 9.5866E-10 30587 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 168.26 146.17 771600000 0 28673000 0 25591000 18813000 25272000 22012000 21231000 15990000 26616000 114710000 81743000 29972000 82709000 278280000 11472 980 10460 97223;97224;97225;97226;97227;97228;97229;97230;97231;97232;97233;97234;97235 77498;77499;77500;77501;77502;77503;77504;77505;77506;77507;77508;77509;77510 77507 11 EGALPPYR Unmodified 901.46577 0.46576654 5244 Q9Y5Q8 GTF3C5 General transcription factor 3C polypeptide 5 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 37.498 37.596 2 0.038808 41467 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 50.898 32.763 33538000 0 0 0 2229000 0 5905700 3680200 0 3312400 6333400 5483900 0 6593200 0 0 11473 5244 10461 97236;97237;97238;97239;97240;97241;97242 77511 77511 1 EGALTAFR Unmodified 863.45012 0.45011648 2471 Q15008 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 44.834 44.893 2 0.016501 50313 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 67.169 33.431 88107000 0 0 0 8806000 9787200 13684000 0 0 0 12661000 21793000 21376000 0 0 0 11474 2471 10462 97243;97244;97245;97246;97247;97248 77512;77513;77514 77512 2 EGALTAFRK Unmodified 991.54508 0.5450795 2471 Q15008 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes yes 0 0 1 By MS/MS By MS/MS By matching 7.33 3.77 1 2 1 1 1 35.253 33.126 2 0.017147 47890 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 123.72 83.653 147100000 135220000 0 0 0 9756200 0 0 0 0 0 0 2128000 0 0 0 11475 2471 10463 97249;97250;97251 77515;77516 77515 0 EGAQFSSHLINLLNPK Unmodified 1766.9315 0.93153309 5085 Q9Y263 PLAA Phospholipase A-2-activating protein yes yes 0 0 0 By MS/MS 10 0 1 1 83.434 83.624 3 0.0014947 96527 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.177 40.947 6189000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6189000 11476 5085 10464 97252 77517 77517 1 EGAQVPTGR Unmodified 913.46174 0.4617438 2427 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.515 15.684 2 0.010094 14439 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.841 34.228 127230000 0 0 0 4906700 3474800 4447700 5877900 6316100 3624600 10495000 16633000 19697000 13843000 12514000 25400000 11477 2427 10465 97253;97254;97255;97256;97257;97258;97259;97260;97261;97262;97263;97264 77518;77519;77520;77521;77522 77518 5 EGAREEDLDAVEAQIGCK Unmodified 1988.9109 0.91093358 4958 Q9UK99 FBXO3 F-box only protein 3 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 70.976 63.934 3 0.00078799 82224 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 56.936 46.302 33782000 6297400 27485000 0 0 0 0 0 0 0 0 0 0 0 0 0 11478 4958 10466 97265;97266;97267 77523;77524;77525 77523 3 EGATSCSASGIR Unmodified 1194.5299 0.52989972 34 A7E2V4 ZSWIM8 Zinc finger SWIM domain-containing protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 15.003 15.098 2 0.00013333 14459 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 104.22 82.758 68981000 0 0 0 6190500 4429700 5608600 6754800 9200600 4615300 6774100 11778000 0 13630000 0 0 11479 34 10467 97268;97269;97270;97271;97272;97273;97274;97275;97276 77526;77527;77528;77529;77530;77531;77532;77533;77534 77527 7 EGATVYATGTHAQVEDGR Unmodified 1860.8602 0.86021864 1320 P32322 PYCR1 Pyrroline-5-carboxylate reductase 1, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 33.318 33.616 3 5.4701E-20 35784 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 101.67 91.747 32856000 0 0 0 0 3353100 0 0 0 2373500 0 0 6868600 5711300 4764900 9784600 11480 1320 10468 97277;97278;97279;97280;97281;97282;97283;97284 77535;77536;77537;77538;77539;77540;77541 77536 7 EGAVVSAPSVK Unmodified 1042.5659 0.56587452 2381 Q14160 SCRIB Protein scribble homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 37.022 36.47 2 0.00063031 39283 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 78.932 34.485 172010000 0 41801000 2118900 0 8517700 11444000 12368000 10420000 10318000 15465000 14525000 15612000 14561000 14863000 0 11481 2381 10469 97285;97286;97287;97288;97289;97290;97291;97292;97293;97294;97295;97296 77542;77543;77544;77545;77546;77547;77548 77546 5 EGCLAFGTDDGK Unmodified 1268.5343 0.53431639 3518 Q8TEQ6 GEMIN5 Gem-associated protein 5 yes yes 0 0 0 By MS/MS 2 0 1 1 48.027 42.464 2 3.3065E-05 55063 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.97 96.986 110610000 0 110610000 0 0 0 0 0 0 0 0 0 0 0 0 0 11482 3518 10470 97297 77549;77550 77549 2 EGCTEVSLLR Unmodified 1162.5652 0.56522259 2645 Q1KMD3 HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 53.033 53.253 2 5.0874E-06 60228 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 149.19 111.46 617240000 0 0 0 47083000 0 0 42656000 0 37297000 69051000 72081000 104120000 80713000 68118000 96123000 11483 2645 10471 97298;97299;97300;97301;97302;97303;97304;97305;97306;97307 77551;77552;77553;77554;77555;77556;77557;77558;77559;77560;77561;77562;77563 77552 13 EGCTSETPHALTVSPFK Unmodified 1859.8724 0.87236323 4350 Q9H1H9 KIF13A Kinesin-like protein KIF13A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.91 3.42 2 1 8 1 2 1 1 1 1 1 1 1 1 64.742 63.207 3 0.0011245 71014 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 48.883 41.726 127870000 10500000 59039000 0 0 0 7841500 5601400 8511900 3370800 7863700 0 7778500 0 6803000 10556000 11484 4350 10472 97308;97309;97310;97311;97312;97313;97314;97315;97316;97317;97318 77564;77565;77566;77567;77568;77569;77570;77571;77572;77573;77574;77575 77573 12 EGDCGDILR Unmodified 1033.4499 0.44985848 3831 Q96F10 SAT2 Diamine acetyltransferase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 31.847 31.936 2 0.0077155 34790 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 71.692 55.538 991630000 0 0 0 75554000 87942000 124180000 0 0 0 122820000 221960000 359180000 0 0 0 11485 3831 10473 97319;97320;97321;97322;97323;97324 77576;77577;77578;77579;77580;77581;77582;77583 77577 7 EGDDGGIFPK Unmodified 1033.4716 0.47163978 2162 Q08752 PPID Peptidyl-prolyl cis-trans isomerase D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 44.212 44.511 2 0.010944 48862 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 55.112 44.043 49433000 0 0 0 7332100 0 0 0 0 0 0 0 10113000 0 8396600 23591000 11486 2162 10474 97325;97326;97327;97328 77584;77585;77586 77585 3 EGDDYEVIPNSNFYVSR Unmodified 2002.8909 0.89085007 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 78.602 78.706 2 1.141E-13 90599 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 124.12 115.39 152000000 0 0 0 0 5668300 13818000 5843100 8643500 11070000 20216000 17166000 18669000 9276200 12100000 29533000 11487 4634 10475 97329;97330;97331;97332;97333;97334;97335;97336;97337;97338;97339 77587;77588;77589;77590;77591;77592;77593;77594;77595;77596 77590 10 EGDELEDNGK Unmodified 1104.4571 0.45711193 128 O00203 AP3B1 AP-3 complex subunit beta-1 yes yes 0 0 0 By MS/MS 10 0 1 1 10.886 11.058 2 0.027036 9627 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 58.981 48.567 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11488 128 10476 97340 77597 77597 1 EGDGVYYNELETR Unmodified 1543.6791 0.67906638 3366 Q8N7H5 PAF1 RNA polymerase II-associated factor 1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.686 55.812 2 8.7084E-12 62962 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 122.7 113.27 338250000 0 0 0 15510000 17614000 22245000 19609000 23831000 14485000 34593000 34060000 41222000 39603000 37937000 37539000 11489 3366 10477 97341;97342;97343;97344;97345;97346;97347;97348;97349;97350;97351;97352 77598;77599;77600;77601;77602;77603;77604;77605;77606;77607;77608;77609;77610 77608 13 EGDIIPPLTGATPPLIGHLK Unmodified 2038.1463 0.14627689 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.6 3.2 4 1 1 2 1 1 94.106 90.092 3 1.0117E-06 112820 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.43 62.813 115410000 8534400 92961000 2638900 0 0 0 0 0 0 0 0 0 0 0 11280000 11490 2203 10478 97353;97354;97355;97356;97357 77611;77612;77613;77614;77615 77611 4 EGDIVFVHK Unmodified 1042.5447 0.54474515 3112 Q7Z6J0;Q8TEJ3 SH3RF1;SH3RF3 E3 ubiquitin-protein ligase SH3RF1;SH3 domain-containing RING finger protein 3 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 42.347 42.365 2 0.032417 48261 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 47.349 24.33 33445000 0 0 0 2595200 2213100 3188200 4755700 3531400 3928000 3208300 0 0 6104400 3920800 0 11491 3112 10479 97358;97359;97360;97361;97362;97363;97364;97365;97366 77616 77616 1 EGDIVTLINK Unmodified 1100.6077 0.60773933 3754 Q96B97 SH3KBP1 SH3 domain-containing kinase-binding protein 1 yes yes 0 0 0 By matching By matching By matching By MS/MS By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 66.961 67.132 2 0.027403 76172 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.982 28.32 21801000 0 0 0 0 706190 0 1960600 0 1968900 0 3900800 4360300 1843500 0 7061100 11492 3754 10480 97367;97368;97369;97370;97371;97372;97373 77617;77618 77617 2 EGDLIAAQAR Unmodified 1042.5407 0.5407224 757 P02545 LMNA Prelamin-A/C;Lamin-A/C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 35.497 34.411 2 0.0012093 38056 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 108.74 90.707 1704700000 21412000 926110000 10560000 79633000 23571000 45686000 39358000 47950000 25802000 56591000 93181000 84694000 34387000 51137000 164670000 11493 757 10481 97374;97375;97376;97377;97378;97379;97380;97381;97382;97383;97384;97385;97386;97387;97388;97389 77619;77620;77621;77622;77623;77624;77625;77626;77627;77628;77629;77630;77631;77632;77633;77634;77635 77620 16 EGDLIAAQARLK Unmodified 1283.7197 0.7197494 757 P02545 LMNA Prelamin-A/C;Lamin-A/C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 6 2 2 4 2 55.906 50.207 2;3 1.1085E-26 62760 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 194.06 157.47 1015100000 82169000 596900000 336010000 0 0 0 0 0 0 0 0 0 0 0 0 11494 757 10482 97390;97391;97392;97393;97394;97395;97396;97397 77636;77637;77638;77639;77640;77641;77642;77643 77643 6 EGDLITLLVPEAR Unmodified 1424.7875 0.78749461 5070 Q9UQB8 BAIAP2 Brain-specific angiogenesis inhibitor 1-associated protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 93.316 93.442 2 0.0007138 108319 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.006 54.493 6305400 0 0 0 0 0 563480 460480 0 0 1663200 889300 0 0 757290 1971700 11495 5070 10483 97398;97399;97400;97401;97402;97403 77644;77645;77646 77646 3 EGDLLFTVAK Unmodified 1091.5863 0.58627561 2273 Q13347 EIF3I Eukaryotic translation initiation factor 3 subunit I yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 75.948 76.061 2 0.0067887 87766 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 64.04 48.67 71450000 0 0 0 0 3559900 3942600 2794500 3782800 2986100 5940900 8680800 10274000 6095600 6259600 17134000 11496 2273 10484 97404;97405;97406;97407;97408;97409;97410;97411;97412;97413;97414 77647;77648;77649;77650;77651;77652;77653;77654;77655;77656;77657 77652 11 EGDLRIMPDSNDSPPAEREPGEVVDSLVGK Unmodified 3207.5354 0.53538561 5264 Q9Y657 SPIN1 Spindlin-1 yes yes 0 0 2 By MS/MS 2 0 1 1 86.936 78.805 4 6.4023E-05 102727 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 39.045 30.866 10697000 10697000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11497 5264 10485 97415 77658;77659 77659 2 EGDLTNLLQNQAVK Unmodified 1541.8049 0.80493559 4669 Q9NVI1 FANCI Fanconi anemia group I protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 75.548 75.597 2 5.6877E-23 86378 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 187.97 167.19 169610000 0 0 0 7491600 11712000 16370000 11137000 14205000 0 17610000 16277000 25109000 14775000 16173000 18753000 11498 4669 10486 97416;97417;97418;97419;97420;97421;97422;97423;97424;97425;97426 77660;77661;77662;77663;77664;77665;77666;77667 77664 7 EGDNILPDQTSQDLK Unmodified 1671.7952 0.79515877 4574 Q9NQS1 AVEN Cell death regulator Aven yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 57.618 57.736 2 3.8186E-07 66131 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 111.63 101.97 285800000 0 0 0 30000000 27672000 21728000 24241000 17718000 22492000 37645000 27639000 23803000 19816000 12921000 20125000 11499 4574 10487 97427;97428;97429;97430;97431;97432;97433;97434;97435;97436;97437;97438 77668;77669;77670;77671;77672;77673;77674;77675;77676;77677 77677 10 EGDPAIYAER Unmodified 1119.5197 0.51965261 4880 Q9UGI8 TES Testin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 35.461 35.662 2 0.0028814 38969 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 79.16 63.9 131540000 0 0 0 7210300 5661700 0 11618000 0 8766400 9554500 15662000 18803000 11217000 11029000 32023000 11500 4880 10488 97439;97440;97441;97442;97443;97444;97445;97446;97447;97448 77678;77679;77680 77680 3 EGDPAIYAERAGYDK Unmodified 1653.7635 0.76346471 4880 Q9UGI8 TES Testin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 1 4 1 51.341 45.79 2;3 0.00033592 59616 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.4 90.669 388720000 39708000 335610000 13410000 0 0 0 0 0 0 0 0 0 0 0 0 11501 4880 10489 97449;97450;97451;97452;97453;97454 77681;77682;77683;77684;77685 77681 4 EGDPLVFATVGSNR Unmodified 1460.726 0.72595699 514 O75530 EED Polycomb protein EED yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.009 76.071 2 1.531E-12 87819 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 105.46 93.247 65943000 0 0 0 4290900 4599300 5542700 3181700 4527100 4602700 6575700 5217100 6513200 4596100 4734300 11562000 11502 514 10490 97455;97456;97457;97458;97459;97460;97461;97462;97463;97464;97465;97466 77686;77687;77688;77689;77690;77691;77692;77693;77694;77695;77696 77694 11 EGDQTSNNIPADIVFVLK Unmodified 1958.9949 0.99492121 1191 P25685 DNAJB1 DnaJ homolog subfamily B member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.1 3.3 3 2 15 2 2 1 1 1 1 2 2 2 1 1 2 2 93.931 92.927 2;3 2.6031E-47 114610 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 178.68 164.78 484700000 37473000 346050000 2213600 0 0 3374200 3063900 3940400 4857600 14843000 11330000 6846900 2701300 11981000 36026000 11503 1191 10491 97467;97468;97469;97470;97471;97472;97473;97474;97475;97476;97477;97478;97479;97480;97481;97482;97483;97484;97485;97486 77697;77698;77699;77700;77701;77702;77703;77704;77705;77706 77698 9 EGDSEFMNIIANEIGSEETLLFLTVGDEK Oxidation (M) 3215.5068 0.50677083 4144 Q9BTE6 AARSD1 Alanyl-tRNA editing protein Aarsd1 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 103.29 96.865 3 5.3927E-08 122207 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.402 50.345 24700000 18761000 5939600 0 0 0 0 0 0 0 0 0 0 0 0 0 11504 4144 10492 97487;97488 77707;77708 77708 5640 2 EGDSEFMNIIANEIGSEETLLFLTVGDEK Unmodified 3199.5119 0.5118562 4144 Q9BTE6 AARSD1 Alanyl-tRNA editing protein Aarsd1 yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 104.95 100.75 3 8.9098E-09 124537 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.176 53.948 9990200 2120100 7870000 0 0 0 0 0 0 0 0 0 0 0 0 0 11505 4144 10492 97489;97490 77709;77710 77709 2 EGDTIIVPGVEGPIVTQIR Unmodified 1992.0892 0.089155943 437 O60841 EIF5B Eukaryotic translation initiation factor 5B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 2 2 2 2 2 2 2 2 2 2 89 89.123 2;3 1.8996E-12 103373 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 114.82 103.91 173040000 0 0 0 0 5773100 13220000 7722900 13300000 8834000 28721000 20813000 19497000 7937400 10672000 36553000 11506 437 10493 97491;97492;97493;97494;97495;97496;97497;97498;97499;97500;97501;97502;97503;97504;97505;97506;97507;97508;97509;97510;97511 77711;77712;77713;77714;77715;77716;77717;77718;77719;77720;77721;77722;77723;77724;77725;77726;77727 77717 15 EGDTMMGQQVAK Oxidation (M) 1309.5642 0.56423631 2454 Q14914 PTGR1 Prostaglandin reductase 1 yes yes 0 1 0 By MS/MS By MS/MS 1.8 0.4 1 4 3 2 41.312 39.683 2 1.9401E-09 92749 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 120.31 104.69 96691000 77928000 18763000 0 0 0 0 0 0 0 0 0 0 0 0 0 11507 2454 10494 97512;97513;97514;97515;97516 77728;77729;77730;77731;77732 77730 4034;4035 5 EGDTMMGQQVAK 2 Oxidation (M) 1325.5592 0.55915094 2454 Q14914 PTGR1 Prostaglandin reductase 1 yes yes 0 2 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 6.8 3.94 1 2 1 6 2 2 1 1 1 1 1 1 8.3645 7.1716 2 0.0014343 5480 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.59 44.553 43107000 12901000 12556000 0 485030 0 0 0 0 0 0 0 4402500 796860 3909800 8055300 11508 2454 10494 97517;97518;97519;97520;97521;97522;97523;97524;97525;97526 77733;77734;77735;77736;77737;77738;77739;77740 77733 4034;4035 8 EGDTMMGQQVAK Unmodified 1293.5693 0.56932169 2454 Q14914 PTGR1 Prostaglandin reductase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 30.138 30.687 2 0.00090163 32039 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 72.879 53.901 44016000 0 0 0 0 0 0 0 0 0 0 6281000 7747300 0 5617400 24370000 11509 2454 10494 97527;97528;97529;97530 77741;77742;77743 77742 3 EGDVEEPTDDSLPTTGDAGGREPMEEK Oxidation (M) 2876.2142 0.21417063 4973 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 yes yes 0 1 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.8 3.37 1 2 7 1 2 1 1 1 1 1 1 1 49.707 48.174 3 2.031E-15 60447 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.202 72.107 128150000 286340 47877000 0 12738000 0 9513400 0 8306200 0 10893000 13438000 0 15428000 9671300 0 11510 4973 10495 97531;97532;97533;97534;97535;97536;97537;97538;97539;97540 77744;77745;77746;77747;77748;77749;77750;77751 77746 6319 8 EGDVEEPTDDSLPTTGDAGGREPMEEK Unmodified 2860.2193 0.21925601 4973 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 55.713 55.061 3 8.0968E-85 62389 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 118.51 108.25 249030000 0 80578000 0 11310000 5249300 15206000 8196500 10961000 6449600 10955000 21031000 18859000 9448000 12583000 38207000 11511 4973 10495 97541;97542;97543;97544;97545;97546;97547;97548;97549;97550;97551;97552;97553;97554 77752;77753;77754;77755;77756;77757;77758;77759;77760;77761;77762;77763;77764;77765;77766;77767;77768;77769 77759 18 EGDVLSNCEFTPAPTPQEHLTK Unmodified 2469.1482 0.14820374 2933 Q6P3X3 TTC27 Tetratricopeptide repeat protein 27 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 69.041 69.165 3 3.0313E-05 79419 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 48.656 40.468 64709000 0 0 0 0 2881800 8795000 0 6092200 0 8961700 0 10110000 5942900 8110400 13814000 11512 2933 10496 97555;97556;97557;97558;97559;97560;97561;97562 77770;77771;77772;77773;77774;77775;77776 77770 6 EGDVLTLLESER Unmodified 1359.6882 0.6881745 1919 P62857 RPS28 40S ribosomal protein S28 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 84.966 85.064 2 0.0039045 98547 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 73.885 63.362 67025000 0 0 0 0 4561300 5754000 3167200 2583600 0 6053700 7383500 9802300 5585300 8134700 13999000 11513 1919 10497 97563;97564;97565;97566;97567;97568;97569;97570;97571;97572 77777;77778;77779;77780;77781;77782;77783 77778 7 EGDVLTLLESEREAR Unmodified 1715.869 0.86899241 1919 P62857 RPS28 40S ribosomal protein S28 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 80.29 80.431 3 0.00053527 92617 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.657 49.634 75299000 0 0 0 0 0 5181600 1119800 2744300 3448800 6496200 5266800 6879600 3938200 7894200 32329000 11514 1919 10498 97573;97574;97575;97576;97577;97578;97579;97580;97581;97582 77784;77785;77786;77787;77788;77789 77785 6 EGDVLTPEQAR Unmodified 1213.5939 0.59388018 4962 Q9UKD2 MRTO4 mRNA turnover protein 4 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 34.321 34.506 2 0.00027942 37486 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 104.39 82.866 131430000 0 0 0 6242800 5976100 13034000 8791200 10257000 9637900 0 20627000 14056000 12413000 13893000 16506000 11515 4962 10499 97583;97584;97585;97586;97587;97588;97589;97590;97591;97592;97593 77790;77791;77792;77793;77794;77795;77796;77797;77798;77799;77800 77794 11 EGDVLTPEQARVLK Unmodified 1553.8413 0.8413211 4962 Q9UKD2 MRTO4 mRNA turnover protein 4 homolog yes yes 0 0 1 By MS/MS 3 0 1 1 60.432 55.63 3 0.029743 68730 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 35.037 29.322 27139000 0 27139000 0 0 0 0 0 0 0 0 0 0 0 0 0 11516 4962 10500 97594 77801;77802 77802 2 EGDVTSGMVK Unmodified 1021.475 0.4750106 3913 Q96KR1 ZFR Zinc finger RNA-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 25.803 25.932 2 0.013695 26233 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.113 29.585 19975000 0 0 0 0 2020000 3607100 2065200 0 0 0 0 0 0 4252000 8030800 11517 3913 10501 97595;97596;97597;97598;97599 77803;77804 77803 2 EGDYVPPEK Unmodified 1032.4764 0.47639081 167 O00541 PES1 Pescadillo homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 2 1 1 1 1 2 1 23.937 24.147 2 0.0032698 24884 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 93.162 75.314 174780000 0 0 0 13437000 12568000 12871000 11003000 7792500 16130000 15195000 12505000 12981000 16711000 22276000 21311000 11518 167 10502 97600;97601;97602;97603;97604;97605;97606;97607;97608;97609;97610;97611;97612;97613 77805;77806;77807;77808;77809;77810;77811;77812;77813;77814;77815;77816;77817;77818;77819;77820;77821 77813 17 EGEAVVLPEVEPGLTAR Unmodified 1764.9258 0.92577901 1079 P18827 SDC1 Syndecan-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 2 1 1 1 1 1 1 81.063 81.123 2 8.9185E-14 93932 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 117.23 92.378 82668000 0 0 0 3489300 4564800 5860100 5354900 3828000 3486200 6844200 8732000 12221000 6690000 6632200 14965000 11519 1079 10503 97614;97615;97616;97617;97618;97619;97620;97621;97622;97623;97624;97625;97626 77822;77823;77824;77825;77826;77827;77828;77829;77830;77831;77832 77830 11 EGEDDFLEK Unmodified 1080.4611 0.46113468 4049 Q99707 MTR Methionine synthase yes yes 0 0 0 By MS/MS By matching By MS/MS 7.33 3.77 1 2 1 1 1 43.213 41.776 2 0.005086 52222 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 111.74 80.51 76861000 0 69676000 0 0 0 0 0 0 0 0 0 0 0 1922200 5262600 11520 4049 10504 97627;97628;97629 77833;77834 77833 2 EGEDGDQPTTPPK Unmodified 1369.5998 0.59975342 1081 P18858 LIG1 DNA ligase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 15.325 15.74 2 0.0034376 14684 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.595 55.444 16321000 0 0 0 0 0 0 0 0 0 0 3478000 0 0 5377500 7466000 11521 1081 10505 97630;97631;97632 77835;77836 77835 2 EGEDGDQPTTPPKPLK Unmodified 1707.8315 0.83154427 1081 P18858 LIG1 DNA ligase 1 yes yes 0 0 1 By MS/MS 3 0 1 1 34.561 30.018 3 0.022256 37736 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 33.796 17.052 3498300 0 3498300 0 0 0 0 0 0 0 0 0 0 0 0 0 11522 1081 10506 97633 77837;77838 77838 2 EGEDLIQQLR Unmodified 1199.6146 0.61461563 566 O75962;O60229 TRIO;KALRN Triple functional domain protein;Kalirin yes no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 66.796 66.978 2 0.0080794 76849 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 60.91 40.39 25159000 0 0 0 0 0 2837500 1974500 2071700 2197000 3061000 3638000 4304500 2425400 2648900 0 11523 566 10507 97634;97635;97636;97637;97638;97639;97640;97641;97642;97643 77839;77840;77841;77842;77843;77844;77845;77846;77847 77840 9 EGEDMIAEEHFGSEK Oxidation (M) 1722.7043 0.70429485 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 1 3 2 44.894 39.822 3 0.00047328 49877 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 65.956 49.528 164990000 15825000 142000000 7165100 0 0 0 0 0 0 0 0 0 0 0 0 11524 2047 10508 97644;97645;97646;97647;97648;97649 77848;77849;77850 77850 3316 2 EGEDMIAEEHFGSEK Unmodified 1706.7094 0.70938023 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.29 0.452 5 2 2 4 1 56.466 50.511 2;3 7.2343E-40 65331 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 167.18 160.94 222320000 31533000 186490000 4301200 0 0 0 0 0 0 0 0 0 0 0 0 11525 2047 10508 97650;97651;97652;97653;97654;97655;97656 77851;77852;77853;77854;77855;77856;77857 77852 6 EGEDPNKAEELPSEK Unmodified 1670.7635 0.76352429 3723 Q969S3 ZNF622 Zinc finger protein 622 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 28.597 27.773 3 0.0010327 29939 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 51.03 41.98 69863000 0 18945000 0 0 6175700 0 5544300 4818100 0 5352000 12230000 7342700 9454400 0 0 11526 3723 10509 97657;97658;97659;97660;97661;97662;97663;97664;97665 77858;77859;77860;77861;77862;77863;77864 77860 6 EGEDSSVIHYDDK Unmodified 1492.6318 0.63178183 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 4 2 24 2 3 1 2 2 2 2 2 2 2 2 2 2 2 2 32.902 32.043 2;3 0.00093002 35545 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 63.181 57.914 1041700000 25802000 280400000 2112400 43090000 49919000 53881000 48525000 49546000 47846000 56759000 80417000 80350000 74937000 45267000 102880000 11527 2451 10510 97666;97667;97668;97669;97670;97671;97672;97673;97674;97675;97676;97677;97678;97679;97680;97681;97682;97683;97684;97685;97686;97687;97688;97689;97690;97691;97692;97693;97694;97695 77865;77866;77867;77868;77869;77870;77871;77872;77873;77874;77875;77876;77877;77878;77879;77880;77881;77882;77883;77884 77883 19 EGEEADAPGVIPGIVGAVVVAVAGAISSFIAYQK Unmodified 3283.734 0.73400907 995 P14209 CD99 CD99 antigen yes yes 0 0 0 By MS/MS 2 0 1 1 112.13 107.42 3 7.367E-07 132160 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 45.325 43.395 3841600 0 3841600 0 0 0 0 0 0 0 0 0 0 0 0 0 11528 995 10511 97696 77885 77885 1 EGEEAGPGDPLLEAVPK Unmodified 1706.8363 0.8362953 2612 Q16543 CDC37 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 6.57 3.97 1 7 1 12 3 5 1 1 1 1 1 1 1 1 1 1 1 1 1 80.721 79.67 2;3 4.0217E-73 89796 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 173.19 154.85 3610300000 256730000 2486700000 7028500 37517000 32022000 48543000 40350000 37970000 32109000 61855000 102490000 105100000 53027000 77339000 231600000 11529 2612 10512 97697;97698;97699;97700;97701;97702;97703;97704;97705;97706;97707;97708;97709;97710;97711;97712;97713;97714;97715;97716;97717 77886;77887;77888;77889;77890;77891;77892;77893;77894;77895;77896;77897;77898;77899;77900;77901;77902;77903;77904;77905;77906 77902 18 EGEEATAEAEEK Unmodified 1291.5416 0.54156984 2228 Q13045 FLII Protein flightless-1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.27 3.47 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 25.728 25.993 2 3.1144E-14 92536 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 164.33 127.14 237170000 45921000 41027000 0 6516800 8143600 10454000 7431400 6946600 5961000 14461000 18616000 15890000 15782000 11696000 28326000 11530 2228 10513 97718;97719;97720;97721;97722;97723;97724;97725;97726;97727;97728;97729;97730;97731;97732 77907;77908;77909;77910;77911;77912;77913;77914;77915;77916;77917;77918;77919;77920;77921 77912 15 EGEEEVPEIQEK Unmodified 1414.6464 0.64636926 2958 Q6PJG2 ELMSAN1 ELM2 and SANT domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 2 2 1 2 1 2 2 1 2 2 42.307 42.475 2 0.00047839 46883 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.16 61.648 1218200000 0 0 0 92626000 73630000 166970000 70426000 40411000 130220000 104690000 97031000 164970000 76190000 95120000 105960000 11531 2958 10514 97733;97734;97735;97736;97737;97738;97739;97740;97741;97742;97743;97744;97745;97746;97747;97748;97749;97750;97751;97752;97753 77922;77923;77924;77925 77922 4 EGEEQLQTQHQK Unmodified 1453.6797 0.67973508 1291 P30876 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.71 1.4 1 23 1 2 2 2 2 2 2 2 1 2 2 2 2 9.8414 9.8176 2;3 0.00026074 6554 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 60.305 53.675 160200000 0 34335000 0 7003000 5970800 6832300 9285500 6457700 5312700 7920800 18226000 15944000 12636000 12792000 17487000 11532 1291 10515 97754;97755;97756;97757;97758;97759;97760;97761;97762;97763;97764;97765;97766;97767;97768;97769;97770;97771;97772;97773;97774;97775;97776;97777 77926;77927;77928;77929;77930;77931;77932;77933;77934 77930 8 EGEEQPVLPEETESSK Unmodified 1786.8109 0.81086841 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 45.136 45.477 2 2.0497E-19 51212 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 130.01 120.32 54765000 0 0 0 0 0 8946700 0 4521400 3654900 4679600 6085800 6107100 6393100 5338100 9038600 11533 619 10516 97778;97779;97780;97781;97782;97783;97784;97785;97786 77935;77936;77937;77938;77939;77940 77935 6 EGEEREDADVSVTQR Unmodified 1718.7707 0.77073493 4669 Q9NVI1 FANCI Fanconi anemia group I protein yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 23.997 24.401 3 0.0016941 25794 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 47.345 41.802 71736000 0 0 0 0 0 0 0 5960400 0 12334000 8408200 13293000 9428500 7798400 14513000 11534 4669 10517 97787;97788;97789;97790;97791;97792;97793 77941;77942;77943;77944;77945;77946 77941 6 EGEETEGSEEDDK Unmodified 1452.5376 0.53760668 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 0 0 By MS/MS By MS/MS 5.5 4.5 1 1 1 1 56.276 59.075 2 0.012516 4038 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.001 39.467 13411000 11263000 0 0 0 0 0 0 0 0 0 0 0 0 0 2148000 11535 1564 10518 97794;97795 77947;77948 77947 1 EGEETEGSEEDDKENDKTEEMPNDSVLENK Unmodified 3425.406 0.40600674 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 0 2 By MS/MS 2 0 1 1 51.3 43.338 4 8.2498E-05 59848 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 38.691 38.679 9439000 9439000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11536 1564 10519 97796 77949 77949 1 EGEEVMFK Unmodified 967.43208 0.43208315 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 41.023 41.149 2 0.017693 45974 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 65.252 44.098 152020000 0 0 0 8227700 8397900 18255000 11759000 10534000 7073700 13221000 15346000 0 11520000 15919000 31766000 11537 2392 10520 97797;97798;97799;97800;97801;97802;97803;97804;97805;97806;97807 77950;77951;77952 77951 3 EGEFVAQFK Unmodified 1053.5131 0.51311067 5067 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.5 2.93 4 1 1 1 3 1 1 61.608 56.934 2 0.0016728 70532 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 133.12 107.82 2331100000 97761000 2085500000 61208000 0 0 0 0 0 0 0 0 0 0 0 86650000 11538 5067 10521 97808;97809;97810;97811;97812;97813 77953;77954;77955;77956;77957;77958;77959;77960;77961;77962;77963 77962 10 EGEGGQESFPELPSEE Unmodified 1719.7112 0.71115437 4275 Q9BZQ8 FAM129A Protein Niban yes yes 0 0 0 By MS/MS 1 0 1 1 102.07 102.96 2 0.0016314 94097 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 63.408 54.301 2093100 0 2093100 0 0 0 0 0 0 0 0 0 0 0 0 0 11539 4275 10522 97814 77964 77964 1 EGEGLGSEGQGIK Unmodified 1259.5994 0.59935949 3251 Q8IWZ8 SUGP1 SURP and G-patch domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 29.798 29.627 2 9.8566E-05 30924 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 85.355 74.597 134300000 0 20413000 0 8224900 4986000 6124700 8003400 6514100 6272000 9545900 11321000 9201100 13875000 9301900 20513000 11540 3251 10523 97815;97816;97817;97818;97819;97820;97821;97822;97823;97824;97825;97826;97827 77965;77966;77967;77968;77969;77970;77971;77972;77973;77974;77975 77971 11 EGEGSDKWVSR Unmodified 1248.5735 0.57347909 5122 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By matching 10 0 5 1 1 1 1 1 34.403 34.86 3 0.016522 38436 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 28.577 8.815 31135000 0 0 0 0 0 0 2341100 0 0 0 5075400 10209000 0 2449300 11060000 11541 5122 10524 97828;97829;97830;97831;97832 77976 77976 1 EGEIAIHNSDGQQATILK Unmodified 1922.9698 0.96976909 5004 Q9ULT8 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 0 0 0 By MS/MS 3 0 1 1 58.869 54.049 3 0.01736 66427 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 29.582 19.243 26727000 0 26727000 0 0 0 0 0 0 0 0 0 0 0 0 0 11542 5004 10525 97833 77977 77977 1 EGEIIHLISK Unmodified 1137.6394 0.63937381 5236 Q9Y5K6 CD2AP CD2-associated protein yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 73.223 66.295 3 0.038948 84410 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 39.625 21.816 15644000 3850300 11794000 0 0 0 0 0 0 0 0 0 0 0 0 0 11543 5236 10526 97834;97835 77978;77979 77979 2 EGELPLEELLR Unmodified 1296.6925 0.6925316 3006 Q6ZRS2 SRCAP Helicase SRCAP yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 92.1 92.201 2 0.037785 106721 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.191 26.362 11183000 0 0 0 0 675450 1073500 0 821640 943350 1057200 1364800 1394700 795450 940550 2116100 11544 3006 10527 97836;97837;97838;97839;97840;97841;97842;97843;97844;97845 77980;77981 77981 2 EGELTVAQGR Unmodified 1058.5356 0.53563702 2094 Q03252 LMNB2 Lamin-B2 yes yes 0 0 0 By MS/MS 10 0 1 1 32.306 31.884 2 0.020509 34751 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 47.198 1.0396 4227000 0 0 0 0 4227000 0 0 0 0 0 0 0 0 0 0 11545 2094 10528 97846 77982 77982 1 EGEMTLK Oxidation (M) 822.37932 0.3793193 1196 P25789 PSMA4 Proteasome subunit alpha type-4 yes yes 0 1 0 By MS/MS By MS/MS 2.67 0.471 1 2 1 2 8.598 5.1358 2 0.034252 7665 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.297 46.191 196670000 2293300 194380000 0 0 0 0 0 0 0 0 0 0 0 0 0 11546 1196 10529 97847;97848;97849 77983;77984 77983 2 EGEMTLK Unmodified 806.3844 0.38440468 1196 P25789 PSMA4 Proteasome subunit alpha type-4 yes yes 0 0 0 By MS/MS 3 0 1 1 23.768 19.806 2 0.039422 24680 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 81.297 38.822 8888100 0 8888100 0 0 0 0 0 0 0 0 0 0 0 0 0 11547 1196 10529 97850 77985;77986 77985 2 EGENPPDGFMAPK Unmodified 1387.6078 0.60781569 642 O95340 PAPSS2 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 51.59 51.816 2 1.2131E-06 57643 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 106.4 99.504 127570000 0 0 0 0 5944100 10684000 5388300 16094000 0 12842000 12601000 15473000 8445300 11486000 28615000 11548 642 10530 97851;97852;97853;97854;97855;97856;97857;97858;97859;97860;97861 77987;77988;77989;77990;77991;77992;77993;77994;77995 77990 9 EGENPPDGFMAPK Oxidation (M) 1403.6027 0.60273031 642 O95340 PAPSS2 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.321 43.499 2 4.46E-05 47778 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 87.298 69.862 113970000 0 0 0 9666100 5315100 10718000 8491800 5961900 0 7100100 15352000 16266000 12943000 8793600 13366000 11549 642 10530 97862;97863;97864;97865;97866;97867;97868;97869;97870;97871;97872;97873 77996;77997;77998;77999;78000;78001;78002;78003;78004;78005;78006;78007;78008 78004 778 12 EGENRAVIHYRDDETMYVESK Oxidation (M) 2556.1551 0.15508003 257 O15144 ARPC2 Actin-related protein 2/3 complex subunit 2 yes yes 0 1 2 By MS/MS 2 0 1 1 50.014 42.113 4 3.2871E-07 58152 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.735 70.035 76650000 76650000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11550 257 10531 97874 78009 78009 342 1 EGENRAVIHYRDDETMYVESK Unmodified 2540.1602 0.16016541 257 O15144 ARPC2 Actin-related protein 2/3 complex subunit 2 yes yes 0 0 2 By MS/MS 2 0 2 2 56.524 48.377 3;4 3.568E-59 66103 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 136.96 132.78 41139000 41139000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11551 257 10531 97875;97876 78010;78011 78010 2 EGEPRIDINMSGFNETDDLK Oxidation (M) 2295.0325 0.03250528 986 P13797 PLS3 Plastin-3 yes yes 0 1 1 By MS/MS By MS/MS 2 0 3 1 2 75.883 69.88 2;3 1.6892E-15 88471 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.38 76.248 489480000 164240000 325240000 0 0 0 0 0 0 0 0 0 0 0 0 0 11552 986 10532 97877;97878;97879 78012;78013;78014;78015;78016 78015 1334 5 EGEPRIDINMSGFNETDDLK Unmodified 2279.0376 0.037590658 986 P13797 PLS3 Plastin-3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 82.736 78.274 3 2.7126E-82 99090 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 149.53 137.09 737520000 312760000 382630000 42126000 0 0 0 0 0 0 0 0 0 0 0 0 11553 986 10532 97880;97881;97882;97883;97884 78017;78018;78019;78020;78021;78022;78023 78022 7 EGEQDAASLK Unmodified 1046.488 0.48801813 5059 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 15.97 16.168 2 0.0039934 15729 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 74.464 35.673 51930000 0 0 0 2945000 2135000 2744400 0 2785100 2823700 0 6678000 9934900 6343000 6643300 8897500 11554 5059 10533 97885;97886;97887;97888;97889;97890;97891;97892;97893;97894 78024;78025;78026;78027;78028;78029 78028 5 EGEQHVDDVSSALK Unmodified 1512.7056 0.70561548 3944 Q96P48 ARAP1 Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 2 2 4 40.355 35.496 2;3 1.4225E-30 46331 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 183.06 134.78 139300000 0 139300000 0 0 0 0 0 0 0 0 0 0 0 0 0 11555 3944 10534 97895;97896;97897;97898 78030;78031 78031 1 EGESEDLASR Unmodified 1091.4731 0.47309635 2156 Q08379 GOLGA2 Golgin subfamily A member 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.357 15.528 2 0.0026033 15234 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 81.95 64.565 71916000 0 0 0 3515100 2612600 3093400 4860400 6076300 3209300 5039600 7343900 10156000 7921300 7372100 10716000 11556 2156 10535 97899;97900;97901;97902;97903;97904;97905;97906;97907;97908;97909;97910 78032;78033;78034;78035;78036;78037;78038 78037 7 EGESGECAVAESEDR Unmodified 1623.6319 0.63185819 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.347 23.552 2 6.714E-10 24632 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 95.018 95.018 31095000 0 0 0 2248900 1641600 1802600 2355400 1959700 1319200 2892500 3099000 3054200 3847300 2387400 4486800 11557 3443 10536 97911;97912;97913;97914;97915;97916;97917;97918;97919;97920;97921;97922 78039;78040;78041;78042;78043;78044;78045;78046;78047;78048;78049;78050 78047 12 EGESPAAGPPPQELVEEEPSAPPTLLEEETEDGSDK Unmodified 3759.701 0.70104977 3296 Q8IZL8 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 84.399 84.506 3 0.049402 97101 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 12.114 11.744 3637900 0 0 0 0 0 0 0 0 0 0 0 0 0 3637900 0 11558 3296 10537 97923 78051 78051 1 EGESVQGSHVTR Unmodified 1284.6058 0.60584185 3609 Q92503 SEC14L1 SEC14-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 3 2 2 2 2 2 2 1 2 2 2 2 9.3568 9.4703 2;3 1.1849E-06 7871 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 115.78 78.054 618150000 0 0 0 34761000 51263000 46017000 46865000 43770000 26659000 37449000 85801000 89821000 57293000 39236000 59211000 11559 3609 10538 97924;97925;97926;97927;97928;97929;97930;97931;97932;97933;97934;97935;97936;97937;97938;97939;97940;97941;97942;97943;97944;97945;97946;97947 78052;78053;78054;78055;78056;78057;78058;78059;78060;78061;78062;78063;78064;78065;78066 78063 6 EGESVTVLR Unmodified 988.51892 0.51892433 3542 Q8WUF5 PPP1R13L RelA-associated inhibitor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 37.934 37.881 2 0.005211 41558 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 80.165 32.422 87216000 0 0 0 15690000 14357000 0 17119000 9304800 0 0 30746000 0 0 0 0 11560 3542 10539 97948;97949;97950;97951;97952 78067;78068;78069;78070 78067 3 EGESVTVLRR Unmodified 1144.62 0.62003536 3542 Q8WUF5 PPP1R13L RelA-associated inhibitor yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 2 1 29.93 30.137 3 0.00057944 31304 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.681 66.688 168080000 0 0 0 11175000 9615800 11935000 12335000 10291000 0 16170000 22293000 16326000 15969000 15179000 26788000 11561 3542 10540 97953;97954;97955;97956;97957;97958;97959;97960;97961;97962;97963;97964 78071;78072;78073;78074;78075;78076;78077;78078;78079 78073 6 EGETPPAPAALSSPLAVPALSASSLSSR Unmodified 2662.3814 0.3813748 4156 Q9BU19 ZNF692 Zinc finger protein 692 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 1 1 1 1 2 2 1 2 2 90.861 90.977 2;3 3.1332E-42 105806 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 67.496 63.902 64156000 0 0 0 0 4667900 3011500 1849200 3412900 3244500 10127000 6594400 11171000 2557500 5694100 11826000 11562 4156 10541 97965;97966;97967;97968;97969;97970;97971;97972;97973;97974;97975;97976;97977;97978;97979 78080;78081;78082;78083;78084;78085;78086;78087;78088;78089;78090;78091;78092 78090 13 EGETVEPYK Unmodified 1050.487 0.4869555 2152 Q08211 DHX9 ATP-dependent RNA helicase A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 23.905 23.151 2 0.0031256 24555 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 91.069 78.08 217980000 9647800 22135000 0 0 0 0 0 0 14555000 31605000 23388000 28223000 33504000 24140000 30782000 11563 2152 10542 97980;97981;97982;97983;97984;97985;97986;97987;97988 78093;78094;78095;78096;78097;78098;78099 78099 7 EGEVLYIIEEDK Unmodified 1435.7082 0.70824124 2766 Q5T0N5 FNBP1L Formin-binding protein 1-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 84.748 79.636 2 2.1209E-09 100125 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.63 100.33 55116000 15712000 37176000 2228700 0 0 0 0 0 0 0 0 0 0 0 0 11564 2766 10543 97989;97990;97991 78100;78101;78102 78100 3 EGEVRETASQTTSSEISSVMVGETEASSSSQDK Unmodified 3432.5322 0.53221031 4736 Q9NY27 PPP4R2 Serine/threonine-protein phosphatase 4 regulatory subunit 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 73.628 69.508 3 4.0393E-198 87442 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 167.65 165.34 45259000 0 37854000 7405100 0 0 0 0 0 0 0 0 0 0 0 0 11565 4736 10544 97992;97993 78103 78103 1 EGEVTTMNHEDLSLLK Unmodified 1814.872 0.87202888 3282 Q8IYB8 SUPV3L1 ATP-dependent RNA helicase SUPV3L1, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 75.129 70.189 3 0.0029659 87907 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 43.042 32.666 32469000 0 32469000 0 0 0 0 0 0 0 0 0 0 0 0 0 11566 3282 10545 97994 78104 78104 1 EGFFPDSVNK Unmodified 1138.5295 0.52948901 49 CON__ENSEMBL:ENSBTAP00000032840 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 62.121 61.612 2 0.0072305 70928 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 62.969 41.198 + 67340000 0 14892000 0 0 4642200 5601800 4859800 6315800 5388100 5879300 8120900 0 6732900 4906800 0 11567 49 10546 97995;97996;97997;97998;97999;98000;98001;98002;98003;98004 78105;78106;78107 78107 3 EGFHFEETLPGFK Unmodified 1536.7249 0.72489436 2943 Q6PCE3 PGM2L1 Glucose 1,6-bisphosphate synthase yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 86.272 82.635 3 0.031436 103140 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 32.567 24.252 20894000 0 18890000 2004000 0 0 0 0 0 0 0 0 0 0 0 0 11568 2943 10547 98005;98006 78108 78108 1 EGFHFEETLTGFK Unmodified 1540.7198 0.71980898 3844 Q96G03 PGM2 Phosphoglucomutase-2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 86.303 79.85 3 0.0030931 101113 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 59.185 51.64 68047000 24619000 43428000 0 0 0 0 0 0 0 0 0 0 0 0 0 11569 3844 10548 98007;98008 78109;78110;78111 78109 3 EGFIRSSEGPKPEK Unmodified 1559.7944 0.79437091 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 2 By MS/MS 2 0 2 2 34.183 27.951 3;4 0.00098027 39387 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.988 37.192 77992000 77992000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11570 5216 10549 98009;98010 78112;78113;78114 78114 3 EGFLDTLVVLHR Unmodified 1397.7667 0.76669959 1467 P42771;P42772 CDKN2A;CDKN2B Cyclin-dependent kinase inhibitor 2A;Cyclin-dependent kinase 4 inhibitor B yes no 0 0 0 By MS/MS 10 0 1 1 88.071 88.221 3 0.0030168 102031 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.592 40.559 7350300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7350300 11571 1467 10550 98011 78115;78116 78115 2 EGFPITALR Unmodified 1002.5498 0.54983053 1637 P50750 CDK9 Cyclin-dependent kinase 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 2 2 2 2 2 2 1 1 2 2 1 74.096 74.157 2 0.0032698 86575 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 93.162 0 547880000 0 0 0 10849000 38100000 44594000 43000000 40608000 39620000 67102000 23166000 28318000 64647000 105220000 42655000 11572 1637 10551 98012;98013;98014;98015;98016;98017;98018;98019;98020;98021;98022;98023;98024;98025;98026;98027;98028;98029;98030;98031 78117;78118;78119;78120;78121;78122;78123;78124;78125;78126;78127;78128;78129;78130;78131;78132;78133 78119 15 EGFPITALREIK Unmodified 1372.7715 0.77145062 1637 P50750 CDK9 Cyclin-dependent kinase 9 yes yes 0 0 1 By MS/MS 2 0 1 1 84.021 75.89 3 0.0042617 99155 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.563 0 16490000 16490000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11573 1637 10552 98032 78134 78134 1 EGFPITSLR Unmodified 1018.5447 0.54474515 1118;5069 P21127;Q9UQ88 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.875 71.943 2 0.0095172 82880 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 66.504 54.073 213890000 0 0 0 13431000 11398000 17333000 12694000 15878000 12509000 20363000 17860000 24395000 18160000 19148000 30722000 11574 1118;5069 10553 98033;98034;98035;98036;98037;98038;98039;98040;98041;98042;98043;98044 78135;78136 78135 2 EGFSIPVSADGFK Unmodified 1352.6612 0.66123147 1601;32 P49792;A6NKT7;Q7Z3J3 RANBP2;RGPD3;RGPD4 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 3;RanBP2-like and GRIP domain-containing protein 4 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.848 81.909 2 2.3993E-05 94419 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.05 74.388 188180000 0 0 0 7300700 9390400 16273000 11444000 16699000 12169000 20794000 17080000 19856000 11966000 16330000 28876000 11575 1601;32 10554 98045;98046;98047;98048;98049;98050;98051;98052;98053;98054;98055;98056 78137;78138;78139;78140;78141;78142;78143;78144;78145;78146;78147;78148 78140 12 EGFTFEYR Unmodified 1047.4662 0.46616048 470 O75175 CNOT3 CCR4-NOT transcription complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 65.685 65.737 2 0.006389 74633 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 101.28 90.87 32921000 0 0 0 2804400 0 0 0 0 0 0 0 0 8143900 8278300 13694000 11576 470 10555 98057;98058;98059;98060 78149;78150;78151 78149 3 EGFTFEYRYLEDRDLQ Unmodified 2079.9538 0.95378467 470 O75175 CNOT3 CCR4-NOT transcription complex subunit 3 yes yes 0 0 2 By MS/MS 2 0 1 1 87.482 79.351 3 2.9558E-15 103295 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 105.31 91.482 22361000 22361000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11577 470 10556 98061 78152 78152 1 EGFTQASLGLLANQRK Unmodified 1731.9268 0.92678206 3892 Q96JG6 CCDC132 Coiled-coil domain-containing protein 132 yes yes 0 0 1 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 74.72 74.904 3 0.01854 85923 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 26.209 14.947 11840000 0 0 0 0 0 0 0 0 2181000 0 0 0 1784100 1635500 6239100 11578 3892 10557 98062;98063;98064;98065 78153 78153 1 EGFVEYTEQVVK Unmodified 1426.698 0.6980109 149;409 O00410;O60518 IPO5;RANBP6 Importin-5;Ran-binding protein 6 no no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 75.441 74.302 2 3.1145E-14 94072 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 166.07 145.16 3190600000 104030000 2554300000 49475000 11023000 18598000 60596000 22307000 25013000 17471000 68446000 44796000 53680000 26501000 35971000 98338000 11579 149;409 10558 98066;98067;98068;98069;98070;98071;98072;98073;98074;98075;98076;98077;98078;98079;98080;98081 78154;78155;78156;78157;78158;78159;78160;78161;78162;78163 78157 8 EGFWPEAFSEVAEK Unmodified 1624.7409 0.74093835 3379 Q8N9N8 EIF1AD Probable RNA-binding protein EIF1AD yes yes 0 0 0 By MS/MS By MS/MS By matching 2.25 0.433 3 1 1 2 1 92.65 87.971 2 0.0045631 110423 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.76 60.07 70589000 20011000 49135000 1443200 0 0 0 0 0 0 0 0 0 0 0 0 11580 3379 10559 98082;98083;98084;98085 78164;78165;78166 78164 3 EGGAGAVDEDDFIK Unmodified 1421.6311 0.63105355 456 O75122 CLASP2 CLIP-associating protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 58.306 57.71 2 0.00011477 66380 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 83.081 62.515 12668000 0 0 0 4180200 8488100 0 0 0 0 0 0 0 0 0 0 11581 456 10560 98086;98087;98088;98089 78167;78168;78169;78170 78169 4 EGGALSEAMSLEGDEWELSK Unmodified 2136.9521 0.95212969 413 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta yes yes 0 0 0 By MS/MS 2 0 1 1 91.363 86.452 2 8.8082E-47 107436 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 162.94 148.91 20224000 0 20224000 0 0 0 0 0 0 0 0 0 0 0 0 0 11582 413 10561 98090 78171 78171 1 EGGARLGAGGGSPEK Unmodified 1341.6637 0.66369108 5029 Q9UNE7 STUB1 E3 ubiquitin-protein ligase CHIP yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 15.257 12.004 3 0.0065417 15296 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 41.625 31.621 168580000 21501000 47794000 99282000 0 0 0 0 0 0 0 0 0 0 0 0 11583 5029 10562 98091;98092;98093 78172 78172 1 EGGDGEEQDVGDAGR Unmodified 1489.5917 0.59170793 3314 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.989 15.159 2 1.8139E-148 14002 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 216.06 216.06 99864000 0 0 0 7067200 3358200 9042400 6282200 4762200 3789900 6939200 14500000 11133000 9572300 9240000 14177000 11584 3314 10563 98094;98095;98096;98097;98098;98099;98100;98101;98102;98103;98104;98105 78173;78174;78175;78176;78177;78178;78179;78180;78181;78182;78183;78184 78176 12 EGGEGFTVDTPAK Unmodified 1306.6041 0.60411052 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 44.396 43.914 2 0.00091538 48337 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 88.056 71.859 186070000 0 59129000 0 11175000 12895000 11694000 13873000 14718000 0 11635000 0 0 18365000 12747000 19835000 11585 3443 10564 98106;98107;98108;98109;98110;98111;98112;98113;98114;98115;98116 78185;78186;78187;78188;78189;78190;78191;78192;78193;78194 78191 10 EGGEGYVPTSYLR Unmodified 1426.6729 0.67285879 2555 Q15642 TRIP10 Cdc42-interacting protein 4 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 65.469 65.776 2 5.4431E-05 74455 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 88.134 73.454 78912000 0 0 0 0 0 0 0 9814000 0 0 13577000 14376000 10182000 11261000 19701000 11586 2555 10565 98117;98118;98119;98120;98121;98122 78195;78196;78197;78198 78196 4 EGGEGYVPTSYLRVTLN Unmodified 1853.9159 0.9159426 2555 Q15642 TRIP10 Cdc42-interacting protein 4 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 87.064 83.427 2 0.019267 103574 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.326 64.793 18816000 0 17333000 1482900 0 0 0 0 0 0 0 0 0 0 0 0 11587 2555 10566 98123;98124 78199 78199 1 EGGGAIEEEAK Unmodified 1088.4986 0.49858282 3475 Q8TAQ2 SMARCC2 SWI/SNF complex subunit SMARCC2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.265 16.445 2 0.00030792 15849 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 94.692 41.976 380720000 0 0 0 21060000 16552000 29129000 25086000 17304000 21862000 32381000 30531000 36496000 56183000 42419000 51717000 11588 3475 10567 98125;98126;98127;98128;98129;98130;98131;98132;98133;98134;98135;98136 78200;78201;78202;78203;78204;78205;78206;78207;78208;78209;78210;78211 78209 8 EGGGDSSASSPTEEEQEQGEIGACSDEGTAQEGK Unmodified 3412.3605 0.36045353 1557 P49006 MARCKSL1 MARCKS-related protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.31 2.4 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 45.845 46.415 3 3.3377E-167 45530 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 163.06 162.89 344120000 29298000 0 0 10241000 15388000 18797000 11038000 11863000 11116000 41689000 86048000 42058000 17592000 19628000 29368000 11589 1557 10568 98137;98138;98139;98140;98141;98142;98143;98144;98145;98146;98147;98148;98149 78212;78213;78214;78215;78216;78217;78218;78219;78220;78221;78222;78223;78224;78225 78219 14 EGGGGISCVLQDGCVFEK Unmodified 1910.8502 0.85024758 1376 P36551 CPOX Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial yes yes 0 0 0 By MS/MS 2.67 0.471 1 2 3 84.029 80.032 2 0.00076118 95982 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 59.871 48.005 26310000 0 26310000 0 0 0 0 0 0 0 0 0 0 0 0 0 11590 1376 10569 98150;98151;98152 78226;78227;78228 78227 3 EGGGNNLYGEEMVQALK Oxidation (M) 1823.836 0.83597772 1547 P48637 GSS Glutathione synthetase yes yes 0 1 0 By MS/MS 10 0 1 1 58.87 59.463 2 0.00026383 67101 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.301 45.882 10234000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10234000 11591 1547 10570 98153 78229 78229 2456 1 EGGGRGTNLGK Unmodified 1044.5312 0.53122035 2076 Q02447 SP3 Transcription factor Sp3 yes yes 0 0 1 By MS/MS 2 0 1 1 6.1998 3.9823 2 0.024274 5722 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 81.525 40.023 7276900 0 0 7276900 0 0 0 0 0 0 0 0 0 0 0 0 11592 2076 10571 98154 78230 78230 1 EGGISRLPAGQATYR Unmodified 1574.8165 0.81650333 4448 Q9H8E8 CSRP2BP Cysteine-rich protein 2-binding protein yes yes 0 0 1 By MS/MS By matching By MS/MS 10 0 3 1 1 1 42.335 42.441 3 0.025072 46878 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 24.353 15.755 10492000 0 0 0 0 3488300 0 1792800 0 0 0 0 5210700 0 0 0 11593 4448 10572 98155;98156;98157 78231 78231 1 EGGLGPLNIPLLADVTR Unmodified 1733.9676 0.96758424 1317 P32119 PRDX2 Peroxiredoxin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 97.56 97.655 2 5.3492E-36 113441 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 126.1 116.56 39820000 0 0 0 1069400 0 0 0 1417200 0 4362300 6197700 1775500 0 1340200 23658000 11594 1317 10573 98158;98159;98160;98161;98162;98163;98164 78232;78233;78234;78235;78236;78237;78238;78239 78234 8 EGGLGPLNIPLLADVTRRLSEDYGVLK Unmodified 2894.5866 0.58655697 1317 P32119 PRDX2 Peroxiredoxin-2 yes yes 0 0 2 By MS/MS 3 0 1 1 101.02 97.537 4 0.00046771 117119 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 34.418 32.043 7421900 0 7421900 0 0 0 0 0 0 0 0 0 0 0 0 0 11595 1317 10574 98165 78240 78240 1 EGGLLTLAGAK Unmodified 1028.5866 0.58660996 882 P09417 QDPR Dihydropteridine reductase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.8 3.12 3 1 1 1 2 1 1 72.011 67.899 2 0.00031141 82988 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 129.38 52.556 873500000 12232000 291820000 11454000 0 0 0 0 0 0 0 0 0 0 0 558000000 11596 882 10575 98166;98167;98168;98169;98170 78241;78242;78243;78244;78245 78243 3 EGGLNMNFMESYFCQK 2 Oxidation (M) 1985.7958 0.79576917 2075 Q02413 DSG1 Desmoglein-1 yes yes 0 2 0 By MS/MS By MS/MS 10 0 2 1 1 71.613 71.368 2 7.3881E-05 82521 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 70.488 65.311 22882000 0 0 0 19787000 0 0 0 0 0 0 0 0 3095000 0 0 11597 2075 10576 98171;98172 78246;78247 78247 3366;3367 2 EGGQDVPSNK Unmodified 1029.4727 0.47270242 4270 Q9BZK7 TBL1XR1 F-box-like/WD repeat-containing protein TBL1XR1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 14 1 1 1 1 2 1 1 2 1 1 1 1 7.1166 7.2561 2 0.001444 4717 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.087 44.959 70029000 0 0 0 3219200 4816600 5236800 5260000 10017000 6820700 4483800 10103000 4229600 4298100 3926400 7618100 11598 4270 10577 98173;98174;98175;98176;98177;98178;98179;98180;98181;98182;98183;98184;98185;98186 78248;78249;78250;78251;78252;78253;78254;78255;78256;78257 78250 10 EGGQIAVFDATNTTR Unmodified 1578.7638 0.76379906 2640 Q16875 PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.218 62.315 2 3.5364E-14 70919 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 99.522 46.733 671860000 0 0 0 54280000 62891000 60929000 51448000 58931000 42099000 70783000 51678000 78401000 60405000 38424000 41586000 11599 2640 10578 98187;98188;98189;98190;98191;98192;98193;98194;98195;98196;98197;98198 78258;78259;78260;78261;78262;78263;78264;78265;78266;78267;78268;78269 78266 11 EGGRGGSGGGGEGIQDR Unmodified 1544.6928 0.69275938 372 O43823 AKAP8 A-kinase anchor protein 8 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 7.5946 7.7454 3 4.9649E-10 5146 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.105 44.442 57303000 0 0 0 0 2847100 3614200 3107400 2875500 4080800 4602100 13007000 5170200 5039600 5886600 7073400 11600 372 10579 98199;98200;98201;98202;98203;98204;98205;98206;98207;98208;98209 78270;78271;78272;78273;78274;78275;78276;78277;78278 78273 9 EGGRGGSGGGGEGIQDRESSFR Unmodified 2150.9689 0.96893424 372 O43823 AKAP8 A-kinase anchor protein 8 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 26.312 26.528 4 4.3113E-05 28320 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 48.824 39.294 70065000 0 0 0 3553600 3846800 6143300 0 4232800 4042700 5525900 9655700 10921000 8354300 3941900 9847000 11601 372 10580 98210;98211;98212;98213;98214;98215;98216;98217;98218;98219;98220 78279;78280;78281;78282;78283;78284 78282 6 EGGSAGLIPSQFLEEK Unmodified 1660.8308 0.83081599 4783 Q9NZW5 MPP6 MAGUK p55 subfamily member 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 83.717 83.195 2 0.00030005 96063 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.312 61.64 172940000 0 108670000 0 1336100 1582700 4594300 2835200 4082100 3288200 10857000 8502900 8019200 6035100 3955100 9173300 11602 4783 10581 98221;98222;98223;98224;98225;98226;98227;98228;98229;98230;98231;98232;98233;98234 78285;78286;78287;78288;78289;78290;78291;78292;78293;78294;78295;78296;78297 78288 12 EGGSDLGMSGNSEPK Unmodified 1463.6198 0.61983694 1106 P20585 MSH3 DNA mismatch repair protein Msh3 yes yes 0 0 0 By MS/MS 10 0 1 1 27.614 28.302 2 0.0028996 29407 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.915 35.684 5136700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5136700 11603 1106 10582 98235 78298 78298 1 EGGSIPVTLTFQEATGK Unmodified 1733.8836 0.88357984 3910 Q96KP4 CNDP2 Cytosolic non-specific dipeptidase yes yes 0 0 0 By MS/MS 10 0 1 1 80.841 81.036 2 3.1396E-06 93820 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 69.352 59.665 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11604 3910 10583 98236 78299 78299 1 EGGTASVATGPDSPSPVPLPPGK Unmodified 2117.0641 0.064063405 2968 Q6SPF0 SAMD1 Atherin yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 69.309 69.33 2 0.045342 80011 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 27.969 22.585 9389800 0 0 0 853660 0 0 0 1055300 2225400 0 2762700 0 2492700 0 0 11605 2968 10584 98237;98238;98239;98240;98241 78300 78300 1 EGGTVVYGGK Unmodified 965.48181 0.48181054 1573 P49419 ALDH7A1 Alpha-aminoadipic semialdehyde dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 19.054 19.218 2 0.010696 19111 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 55.549 24.937 44153000 0 0 0 7367100 1867600 2609300 0 4407700 1960400 4759200 7535200 8019500 0 5626800 0 11606 1573 10585 98242;98243;98244;98245;98246;98247;98248;98249;98250 78301;78302;78303 78302 3 EGGVEEAGGPPASLCK Unmodified 1556.7141 0.71407167 4875 Q9UFB7 ZBTB47 Zinc finger and BTB domain-containing protein 47 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 42.802 42.955 2 1.2567E-05 48112 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 72.958 57.814 6798200 0 0 0 0 0 0 0 0 3540600 3257700 0 0 0 0 0 11607 4875 10586 98251;98252;98253 78304;78305 78305 2 EGHETPMDIDSDDSK Unmodified 1674.6679 0.66790934 3500 Q8TDB6 DTX3L E3 ubiquitin-protein ligase DTX3L yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 35.145 30.496 3 0.0091616 39939 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 40.187 37.624 17134000 0 17134000 0 0 0 0 0 0 0 0 0 0 0 0 0 11608 3500 10587 98254;98255 78306 78306 1 EGHETPMDIDSDDSK Oxidation (M) 1690.6628 0.66282396 3500 Q8TDB6 DTX3L E3 ubiquitin-protein ligase DTX3L yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 20.848 17.021 3 0.0020069 21264 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 54.898 50.049 2507200 0 2507200 0 0 0 0 0 0 0 0 0 0 0 0 0 11609 3500 10587 98256;98257 78307;78308 78308 5015 2 EGHLSPDIVAEQK Unmodified 1421.7151 0.71505795 1023 P15559 NQO1 NAD(P)H dehydrogenase [quinone] 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.17 3.73 8 3 19 3 6 2 1 2 1 2 2 1 1 2 2 1 2 2 44.552 42.791 2;3 1.8116E-52 46696 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 223.87 176.27 4074900000 181690000 3281300000 107040000 15439000 16280000 17441000 6435800 81432000 10766000 19552000 67108000 65950000 4571400 59711000 140210000 11610 1023 10588 98258;98259;98260;98261;98262;98263;98264;98265;98266;98267;98268;98269;98270;98271;98272;98273;98274;98275;98276;98277;98278;98279;98280;98281;98282;98283;98284;98285;98286;98287 78309;78310;78311;78312;78313;78314;78315;78316;78317;78318;78319;78320;78321;78322;78323;78324;78325;78326;78327;78328;78329;78330;78331;78332;78333;78334;78335;78336;78337;78338;78339 78318 22 EGHQVALLSGEMMVEQR 2 Oxidation (M) 1944.9033 0.90334578 4655;5016 Q9NUU7;Q9UMR2 DDX19A;DDX19B ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX19B no no 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 50.818 50.975 3 7.5936E-09 57541 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 73.76 58.506 184870000 0 0 0 14680000 0 25836000 29069000 18191000 0 0 27612000 45144000 24334000 0 0 11611 4655;5016 10589 98288;98289;98290;98291;98292;98293;98294;98295;98296 78340;78341;78342;78343;78344;78345;78346;78347;78348;78349;78350;78351;78352;78353 78342 6068;6069 14 EGHQVALLSGEMMVEQR Oxidation (M) 1928.9084 0.90843116 4655;5016 Q9NUU7;Q9UMR2 DDX19A;DDX19B ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX19B no no 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 64.22 64.29 3 0.0010039 72750 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.442 38.338 20392000 0 0 0 0 5249300 0 0 0 0 0 0 0 5328400 0 9814600 11612 4655;5016 10589 98297;98298;98299 78354;78355 78354 6068;6069 1 EGIAASFAVK Unmodified 991.53385 0.53384611 5280 Q9Y6E2 BZW2 Basic leucine zipper and W2 domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.24 3.75 5 1 11 1 5 1 1 1 1 1 1 1 1 1 1 1 62.042 59.649 1;2 0.00055331 76328 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.33 59.855 1061100000 19240000 934030000 0 8493200 6962300 9689100 15453000 13467000 0 0 15226000 11920000 8265600 0 18327000 11613 5280 10590 98300;98301;98302;98303;98304;98305;98306;98307;98308;98309;98310;98311;98312;98313;98314;98315;98316 78356;78357;78358;78359;78360;78361;78362;78363;78364;78365;78366;78367;78368;78369;78370;78371;78372;78373;78374;78375 78359 20 EGICALGGTSELSSEGTQHSYSEEEK Unmodified 2784.2032 0.20321202 986 P13797 PLS3 Plastin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 62.305 60.963 3 1.194E-180 77633 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 213.05 210.27 1579100000 121090000 946890000 34512000 15644000 14807000 38690000 21002000 16796000 11271000 33696000 57381000 81082000 26890000 52216000 107170000 11614 986 10591 98317;98318;98319;98320;98321;98322;98323;98324;98325;98326;98327;98328;98329;98330;98331;98332 78376;78377;78378;78379;78380;78381;78382;78383;78384;78385;78386;78387;78388;78389;78390;78391;78392;78393;78394;78395;78396;78397 78381 22 EGIFAVDTMLK Unmodified 1222.6268 0.62676022 2424 Q14669 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes yes 0 0 0 By MS/MS 2 0 1 1 90.111 85.215 2 0.0050838 105952 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.465 46.655 8456000 0 8456000 0 0 0 0 0 0 0 0 0 0 0 0 0 11615 2424 10592 98333 78398 78398 1 EGIHAQQK Unmodified 909.46683 0.46682918 59 CON__P02662 yes yes 0 0 0 By MS/MS 2 0 1 1 5.5722 2.3318 2 3.0388E-19 4300 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 204.1 137.1 + 68058000 0 68058000 0 0 0 0 0 0 0 0 0 0 0 0 0 11616 59 10593 98334 78399;78400 78399 2 EGIHVLDWPFDDGAPPPNQIVDDWLNLLK Unmodified 3312.6455 0.64552841 2218 Q12974 PTP4A2 Protein tyrosine phosphatase type IVA 2 yes yes 0 0 0 By MS/MS 2 0 1 1 105.07 96.944 3 4.0199E-07 124475 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.941 43.887 4678100 4678100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11617 2218 10594 98335 78401 78401 1 EGIIHTLIVDNREIPEIAS Unmodified 2118.1321 0.13208339 4677 Q9NVQ4 FAIM Fas apoptotic inhibitory molecule 1 yes yes 0 0 1 By MS/MS 2 0 1 1 92.549 84.419 3 0.011887 109301 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 33.405 24.585 34187000 34187000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11618 4677 10595 98336 78402;78403 78403 2 EGIIPANYVQK Unmodified 1230.6608 0.66083754 1438 P41240 CSK Tyrosine-protein kinase CSK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 61.805 61.895 2 0.03124 70495 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 38.302 26.812 56065000 0 0 0 2768300 2787600 8254000 0 3382100 0 6950800 5714000 9340200 2978000 5385000 8504600 11619 1438 10596 98337;98338;98339;98340;98341;98342;98343;98344;98345;98346 78404 78404 1 EGILNDDIYCPPETAVLLASYAVQSK Unmodified 2865.4106 0.41062602 1198 P26038 MSN Moesin yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 4 2 3 3 99.645 94.218 2;3 4.237E-151 118142 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 189.56 178.77 335750000 132290000 203460000 0 0 0 0 0 0 0 0 0 0 0 0 0 11620 1198 10597 98347;98348;98349;98350;98351;98352 78405;78406;78407;78408;78409;78410;78411;78412;78413 78413 8 EGILPERAEEAK Unmodified 1340.6936 0.69359423 365 O43768 ENSA Alpha-endosulfine yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 5.2 3.92 6 4 2 2 2 1 1 1 1 40.671 37.76 2;3 0.00024538 49483 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.96 79.999 1050500000 241350000 474760000 296640000 0 0 0 0 0 0 0 5856900 9273700 0 6155600 16476000 11621 365 10598 98353;98354;98355;98356;98357;98358;98359;98360;98361;98362 78414;78415;78416;78417 78414 1 EGILSDEIYCPPETAVLLGSYAVQAK Unmodified 2822.4048 0.40481236 1017 P15311 EZR Ezrin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.43 0.495 4 3 2 4 1 98.119 93.807 2;3 1.6237E-159 116163 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 199.65 189.72 574770000 67390000 466780000 40594000 0 0 0 0 0 0 0 0 0 0 0 0 11622 1017 10599 98363;98364;98365;98366;98367;98368;98369 78418;78419;78420;78421;78422;78423 78419 6 EGIMNPEVGMK Oxidation (M) 1219.5577 0.55769437 4252 Q9BYT8 NLN Neurolysin, mitochondrial yes yes 0 1 0 By MS/MS 2 0 1 1 46.285 40.837 2 0.00082952 53019 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.098 77.469 32136000 0 32136000 0 0 0 0 0 0 0 0 0 0 0 0 0 11623 4252 10600 98370 78424;78425 78425 5718 2 EGIPALDNFLDK Unmodified 1330.6769 0.67688153 980 P13639 EEF2 Elongation factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.77 3.94 1 10 3 12 5 7 2 1 1 1 1 1 1 1 1 1 1 1 1 90.032 88.152 2 1.1849E-06 101435 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 115.78 88.478 9461100000 1825200000 7015900000 160180000 5208300 6261200 20266000 6071700 11017000 14454000 26554000 45143000 37722000 10027000 43064000 234110000 11624 980 10601 98371;98372;98373;98374;98375;98376;98377;98378;98379;98380;98381;98382;98383;98384;98385;98386;98387;98388;98389;98390;98391;98392;98393;98394;98395;98396 78426;78427;78428;78429;78430;78431;78432;78433;78434;78435;78436;78437;78438;78439;78440;78441;78442;78443;78444;78445;78446;78447;78448;78449;78450;78451;78452;78453;78454;78455;78456;78457;78458;78459;78460;78461;78462;78463;78464;78465;78466;78467;78468;78469;78470;78471 78464 45 EGIPALDNFLDKL Unmodified 1443.7609 0.76094551 980 P13639 EEF2 Elongation factor 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.27 0.573 1 9 5 4 10 1 101.46 97.504 2 7.1995E-08 115817 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 128.03 85.844 5231400000 2472200000 2730000000 29209000 0 0 0 0 0 0 0 0 0 0 0 0 11625 980 10602 98397;98398;98399;98400;98401;98402;98403;98404;98405;98406;98407;98408;98409;98410;98411 78472;78473;78474;78475;78476;78477;78478;78479;78480;78481;78482;78483;78484;78485;78486;78487;78488;78489;78490;78491;78492;78493;78494 78489 21 EGIPLIILAGK Unmodified 1122.7012 0.70124579 1535 P48200 IREB2 Iron-responsive element-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 90.834 90.165 2 0.011696 104471 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 48.283 28.796 40655000 0 19167000 6316500 0 537520 1459700 1198000 859100 715910 1589900 1620600 1678000 1092300 1585300 2834700 11626 1535 10603 98412;98413;98414;98415;98416;98417;98418;98419;98420;98421;98422;98423;98424;98425 78495;78496;78497;78498;78499;78500;78501 78495 6 EGIPPDQQR Unmodified 1038.5094 0.50942227 1933 P62987;P62979;P0CG47;P0CG48 UBA52;RPS27A;UBB;UBC Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.48 1 2 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 24.547 24.255 2 0.0030679 19606 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 91.9 65.677 1891600000 221820000 570310000 0 131750000 38983000 47769000 41674000 49430000 34792000 61894000 128710000 143450000 56382000 98840000 265780000 11627 1933 10604 98426;98427;98428;98429;98430;98431;98432;98433;98434;98435;98436;98437;98438;98439;98440;98441 78502;78503;78504;78505;78506;78507;78508;78509;78510;78511;78512;78513;78514;78515;78516;78517;78518;78519;78520;78521;78522;78523;78524;78525;78526;78527;78528;78529;78530;78531;78532;78533;78534;78535;78536;78537;78538;78539;78540;78541;78542;78543;78544;78545;78546;78547;78548;78549;78550;78551;78552;78553;78554;78555;78556;78557;78558;78559;78560;78561;78562;78563;78564;78565;78566;78567;78568;78569;78570;78571;78572;78573;78574;78575;78576;78577;78578;78579;78580;78581;78582;78583;78584;78585;78586;78587;78588;78589;78590;78591;78592;78593;78594;78595;78596;78597;78598;78599 78518 98 EGIPPDQQRLIFAGK Unmodified 1667.8995 0.89950468 1933 P62987;P62979;P0CG47;P0CG48 UBA52;RPS27A;UBB;UBC Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin yes no 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.559 1 10 5 6 7 3 73.557 68.288 2;3 8.3021E-39 83226 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 140.39 126.73 2898700000 933880000 1067000000 897790000 0 0 0 0 0 0 0 0 0 0 0 0 11628 1933 10605 98442;98443;98444;98445;98446;98447;98448;98449;98450;98451;98452;98453;98454;98455;98456;98457 78600;78601;78602;78603;78604;78605;78606;78607;78608;78609;78610;78611;78612;78613;78614;78615;78616;78617;78618;78619;78620;78621;78622;78623;78624;78625;78626;78627;78628;78629;78630;78631;78632;78633;78634;78635;78636;78637;78638;78639 78638 36 EGIPPQQQR Unmodified 1051.5411 0.54105675 2588 Q15843 NEDD8 NEDD8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 17.534 17.319 2 0.012801 16602 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.76 43.395 106860000 0 35144000 0 0 0 5975600 8603500 0 4907100 6820300 12303000 14869000 0 0 18241000 11629 2588 10606 98458;98459;98460;98461;98462;98463;98464;98465 78640;78641;78642;78643;78644;78645 78643 6 EGIPPQQQRLIYSGK Unmodified 1712.921 0.9209684 2588 Q15843 NEDD8 NEDD8 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 57.023 51.041 3 0.00078689 69840 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.648 61.032 125290000 100760000 12504000 12025000 0 0 0 0 0 0 0 0 0 0 0 0 11630 2588 10607 98466;98467;98468 78646;78647;78648;78649;78650;78651;78652 78647 7 EGIQWEAK Unmodified 959.47125 0.47124585 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.271 42.448 2 0.021457 47260 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 61.962 26.762 228350000 0 0 0 11715000 10948000 16529000 17553000 15646000 15100000 20907000 22337000 23439000 25076000 19552000 29545000 11631 2451 10608 98469;98470;98471;98472;98473;98474;98475;98476;98477;98478;98479;98480 78653;78654;78655;78656;78657;78658 78653 6 EGIREETVSLRK Unmodified 1415.7732 0.77324153 1107 P20618 PSMB1 Proteasome subunit beta type-1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.94 3.58 1 3 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37.45 36.982 3 0.0035769 46513 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.667 59.043 1014900000 478330000 22987000 5121100 23047000 7899700 31817000 13661000 17193000 18667000 20816000 64525000 76157000 27232000 51102000 156360000 11632 1107 10609 98481;98482;98483;98484;98485;98486;98487;98488;98489;98490;98491;98492;98493;98494;98495;98496 78659;78660;78661;78662;78663;78664;78665;78666;78667;78668 78664 4 EGITGPPADSSK Unmodified 1157.5564 0.55643205 1113 P20810 CAST Calpastatin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.31 2.4 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 29.925 30.518 2 0.0035233 23703 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.499 64.967 540680000 29141000 0 0 28450000 19255000 35972000 27589000 21105000 35129000 30989000 44063000 64719000 46916000 55256000 102090000 11633 1113 10610 98497;98498;98499;98500;98501;98502;98503;98504;98505;98506;98507;98508;98509 78669;78670;78671;78672;78673;78674;78675;78676 78670 4 EGITGPPADSSKPIGPDDAIDALSSDFTCGSPTAAGK Unmodified 3601.673 0.67300131 1113 P20810 CAST Calpastatin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.45 3.89 4 1 6 1 3 1 1 1 1 1 1 1 89.39 87.325 3 7.1309E-61 108283 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.133 89.801 541690000 32043000 434290000 16788000 0 0 0 0 2778800 0 8505200 10055000 7914500 0 2248800 27073000 11634 1113 10611 98510;98511;98512;98513;98514;98515;98516;98517;98518;98519;98520 78677;78678;78679;78680;78681;78682;78683;78684;78685;78686;78687;78688;78689 78678 13 EGITTYFSGNCTMEDAK Oxidation (M) 1938.7975 0.79754331 4737 Q9NY33 DPP3 Dipeptidyl peptidase 3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 66.559 63.532 2 8.0521E-26 80381 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.56 120.3 143450000 0 135580000 954910 0 0 0 0 0 0 0 0 0 0 0 6921100 11635 4737 10612 98521;98522;98523 78690;78691 78690 6116 2 EGITTYFSGNCTMEDAK Unmodified 1922.8026 0.80262869 4737 Q9NY33 DPP3 Dipeptidyl peptidase 3 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 76.018 72.271 2 7.0911E-35 90202 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 168.82 154.26 333910000 0 331350000 2559600 0 0 0 0 0 0 0 0 0 0 0 0 11636 4737 10612 98524;98525;98526 78692;78693;78694 78692 3 EGIVALRR Unmodified 912.5505 0.55049923 1410 P40227 CCT6A T-complex protein 1 subunit zeta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.935 33.119 2 7.5631E-07 36257 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 183.89 95.252 947140000 0 0 0 29787000 37718000 77940000 68389000 57968000 59526000 82593000 117000000 98443000 84598000 71584000 161590000 11637 1410 10613 98527;98528;98529;98530;98531;98532;98533;98534;98535;98536;98537;98538 78695;78696;78697;78698;78699;78700;78701;78702;78703;78704 78699 1 EGIVENLFK Unmodified 1047.5601 0.56006086 5192 Q9Y4B6 VPRBP Protein VPRBP yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 79.111 78.518 2 0.00063207 98649 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.18 67.464 86308000 0 46983000 4559900 0 0 0 1361100 0 2131900 4629800 5154400 3795200 2982500 4491900 10218000 11638 5192 10614 98539;98540;98541;98542;98543;98544;98545;98546;98547;98548 78705;78706;78707 78705 3 EGIVLHSTK Unmodified 982.54475 0.54474515 5075 Q9Y223 GNE Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase;UDP-N-acetylglucosamine 2-epimerase (hydrolyzing);N-acetylmannosamine kinase yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 21.369 21.686 2 0.013293 21319 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.019 28.084 12019000 0 0 0 0 0 2743300 0 0 0 0 0 0 0 3724300 5551400 11639 5075 10615 98549;98550;98551 78708 78708 1 EGIVQTEQIR Unmodified 1171.6197 0.619701 2916 Q6P1J9 CDC73 Parafibromin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 41.472 41.227 2 2.6445E-06 45934 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 150.27 93.546 982010000 0 25822000 0 39680000 46138000 59394000 49388000 55180000 51569000 84531000 102150000 118440000 133410000 91428000 124890000 11640 2916 10616 98552;98553;98554;98555;98556;98557;98558;98559;98560;98561;98562;98563;98564 78709;78710;78711;78712;78713;78714;78715;78716;78717;78718;78719;78720;78721;78722;78723 78719 15 EGIVQTEQIRSLSEAMSVEK Unmodified 2233.126 0.12601173 2916 Q6P1J9 CDC73 Parafibromin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 84.1 78.979 3 0.00013774 96979 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 45.094 39.514 44844000 8475900 33926000 2442400 0 0 0 0 0 0 0 0 0 0 0 0 11641 2916 10617 98565;98566;98567 78724;78725;78726;78727 78727 4 EGIVTATEQEVK Unmodified 1302.6667 0.66671078 2210 Q12931 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.921 48.083 2 8.8788E-09 54017 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 140.05 97.186 445160000 0 0 0 22956000 23546000 36389000 32431000 28354000 24493000 52814000 46579000 34748000 58665000 36822000 47362000 11642 2210 10618 98568;98569;98570;98571;98572;98573;98574;98575;98576;98577;98578;98579 78728;78729;78730;78731;78732;78733;78734;78735;78736;78737;78738 78736 10 EGKPEIEGKPESEGEPGSETR Unmodified 2241.0397 0.039699148 3811 Q96EI5 TCEAL4 Transcription elongation factor A protein-like 4 yes yes 0 0 2 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 24.926 25.119 3 2.7206E-06 25409 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.416 56.252 61523000 0 0 0 0 4195000 6302600 6031600 0 0 7219400 0 21180000 0 0 16595000 11643 3811 10619 98580;98581;98582;98583;98584;98585 78739;78740 78739 2 EGKPGGTVESGNGEDLTK Unmodified 1773.8381 0.83808621 4954 Q9UK59 DBR1 Lariat debranching enzyme yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 22.774 22.825 3 0.0041879 24111 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 35.133 30.742 17437000 0 0 0 6006100 0 0 5212700 0 0 0 0 0 0 6217900 0 11644 4954 10620 98586;98587;98588 78741;78742 78742 2 EGKPTIVEEDDPELFK Unmodified 1844.9044 0.90437487 562 O75937 DNAJC8 DnaJ homolog subfamily C member 8 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 3 2 1 1 1 1 1 1 1 1 1 1 1 1 70.075 68.395 2;3 1.1148E-19 77464 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.37 78.315 1073000000 267020000 666360000 0 2133900 4530700 5532100 4809500 6711400 5690500 8448000 18540000 14121000 4371000 15879000 48900000 11645 562 10621 98589;98590;98591;98592;98593;98594;98595;98596;98597;98598;98599;98600;98601;98602;98603;98604;98605 78743;78744;78745;78746;78747;78748;78749;78750;78751;78752;78753;78754;78755;78756;78757;78758 78747 16 EGLAELYEYK Unmodified 1213.5867 0.58666954 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.079 71.153 2 0.0015399 81776 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 104.17 77.752 116560000 0 0 0 5064000 5460200 15536000 8044300 6828500 7574000 9862700 10201000 14148000 9026900 8721000 16091000 11646 2361 10622 98606;98607;98608;98609;98610;98611;98612;98613;98614;98615;98616;98617 78759;78760;78761;78762;78763;78764;78765;78766;78767;78768;78769;78770;78771;78772 78764 7 EGLAEYIVEFLK Unmodified 1409.7442 0.74423282 1418 P40692 MLH1 DNA mismatch repair protein Mlh1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 102.14 96.695 2 6.5839E-18 121304 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 156.48 138.17 34610000 24029000 10581000 0 0 0 0 0 0 0 0 0 0 0 0 0 11647 1418 10623 98618;98619;98620 78773;78774;78775;78776 78776 4 EGLDDQGLTK Unmodified 1074.5193 0.51931826 4960 Q9UKA9 PTBP2 Polypyrimidine tract-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.789 32.973 2 0.00092183 36040 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 113.66 73.555 195040000 0 0 0 15919000 8212700 15808000 13490000 10487000 11400000 21900000 22169000 25156000 15245000 10181000 25070000 11648 4960 10624 98621;98622;98623;98624;98625;98626;98627;98628;98629;98630;98631;98632 78777;78778;78779;78780;78781;78782;78783;78784;78785;78786;78787;78788;78789 78778 13 EGLDEVAGIINDAK Unmodified 1442.7253 0.72528829 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 7 3.69 1 1 3 2 1 1 1 83.208 81.626 2 2.9919E-40 94982 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 168.22 144.19 157880000 0 114950000 0 0 12394000 0 0 17811000 12725000 0 0 0 0 0 0 11649 2361 10625 98633;98634;98635;98636;98637 78790;78791;78792;78793;78794 78792 5 EGLEAGTPAAGEK Unmodified 1228.5935 0.59354583 500 O75448 MED24 Mediator of RNA polymerase II transcription subunit 24 yes yes 0 0 0 By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 27.262 27.513 2 0.0060885 28335 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 47.894 26.922 25498000 0 0 0 0 3919500 0 2165900 2084100 0 4912000 0 2864500 3188100 2311900 4052100 11650 500 10626 98638;98639;98640;98641;98642;98643;98644;98645 78795;78796 78796 2 EGLEEGDQILR Unmodified 1257.6201 0.62009493 2136 Q07157 TJP1 Tight junction protein ZO-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 55.88 56.143 2 0.0038767 64018 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 83.456 60.964 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11651 2136 10627 98646;98647;98648;98649;98650 78797;78798;78799;78800;78801 78797 5 EGLEFAVIR Unmodified 1032.5604 0.56039521 5258 Q9Y606 PUS1 tRNA pseudouridine synthase A, mitochondrial yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 2 1 1 1 1 1 77.641 77.783 2 0.0051351 89428 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.529 63.799 42252000 0 0 0 0 0 6127900 3042700 4658400 2494600 4585300 0 6314700 2548200 4797800 7682200 11652 5258 10628 98651;98652;98653;98654;98655;98656;98657;98658;98659;98660 78802;78803;78804;78805 78802 4 EGLEIVK Unmodified 786.44872 0.4487195 974 P13010 XRCC5 X-ray repair cross-complementing protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 4 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 44.425 43.471 2 0.02234 55665 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.43 25.167 3042000000 113340000 2127200000 50661000 42381000 28771000 49208000 44764000 43746000 31163000 54142000 75320000 75989000 64794000 76504000 164000000 11653 974 10629 98661;98662;98663;98664;98665;98666;98667;98668;98669;98670;98671;98672;98673;98674;98675;98676 78806;78807;78808;78809;78810;78811;78812;78813;78814;78815;78816 78809 11 EGLELLK Unmodified 800.46437 0.46436956 827 P06733 ENO1 Alpha-enolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.36 3.99 1 8 1 12 4 4 2 1 1 1 1 1 1 1 1 1 1 1 1 63.913 62.366 1;2 0.023725 67113 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.244 26.78 20118000000 662440000 15035000000 1263900000 170340000 22924000 25674000 30358000 26187000 17320000 29051000 392970000 609680000 30906000 346770000 1454600000 11654 827 10630 98677;98678;98679;98680;98681;98682;98683;98684;98685;98686;98687;98688;98689;98690;98691;98692;98693;98694;98695;98696;98697;98698 78817;78818;78819;78820;78821;78822;78823;78824;78825;78826;78827;78828;78829;78830;78831;78832;78833;78834;78835 78824 17 EGLELPEDEEEK Unmodified 1415.6304 0.63038485 862;850;2715 P07900;Q58FG0;P08238;Q58FF7;Q58FF6 HSP90AA1;HSP90AA5P;HSP90AB1;HSP90AB3P;HSP90AB4P Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 4 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.52 4.07 5 15 2 18 12 6 4 1 1 2 2 1 2 2 2 1 1 2 1 61.756 60.868 2 2.0116E-14 70682 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 164.43 160.84 27054000000 5559600000 6722700000 179880000 1536000000 1200300000 1277200000 1341400000 1110300000 667920000 1331300000 1314000000 677310000 1032500000 1455500000 1647500000 11655 850;862;2715 10631 98699;98700;98701;98702;98703;98704;98705;98706;98707;98708;98709;98710;98711;98712;98713;98714;98715;98716;98717;98718;98719;98720;98721;98722;98723;98724;98725;98726;98727;98728;98729;98730;98731;98732;98733;98734;98735;98736;98737;98738 78836;78837;78838;78839;78840;78841;78842;78843;78844;78845;78846;78847;78848;78849;78850;78851;78852;78853;78854;78855;78856;78857;78858;78859;78860;78861;78862;78863;78864;78865;78866;78867;78868;78869;78870;78871;78872;78873;78874;78875;78876;78877;78878;78879;78880;78881;78882;78883;78884;78885;78886;78887;78888;78889;78890;78891;78892;78893;78894;78895;78896;78897;78898;78899;78900;78901;78902;78903;78904;78905;78906;78907;78908;78909;78910;78911;78912;78913;78914;78915;78916;78917;78918;78919;78920;78921;78922;78923;78924;78925 78884 88 EGLELPEDEEEKK Unmodified 1543.7253 0.72534787 862;850;2715 P07900;Q58FG0;P08238;Q58FF7;Q58FF6 HSP90AA1;HSP90AA5P;HSP90AB1;HSP90AB3P;HSP90AB4P Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 4 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.55 3.8 6 4 12 4 5 1 1 1 1 1 1 1 1 1 1 1 1 1 46.945 45.038 2;3 1.8638E-09 58258 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 146.71 132.02 1835500000 284890000 711600000 14070000 54150000 41865000 33004000 72524000 47196000 16686000 63654000 113840000 108250000 61684000 65705000 146430000 11656 850;862;2715 10632 98739;98740;98741;98742;98743;98744;98745;98746;98747;98748;98749;98750;98751;98752;98753;98754;98755;98756;98757;98758;98759;98760 78926;78927;78928;78929;78930;78931;78932;78933;78934;78935;78936;78937;78938;78939;78940;78941;78942;78943;78944;78945 78930 18 EGLEYIPLR Unmodified 1088.5866 0.58660996 2527 Q15392 DHCR24 Delta(24)-sterol reductase yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 10 0 8 1 1 1 1 1 1 1 1 75.395 75.449 2 0.046872 87076 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 42.869 7.4312 18518000 0 0 0 1921000 0 3172300 0 1695800 0 1983800 2139500 3739100 1746000 2120800 0 11657 2527 10633 98761;98762;98763;98764;98765;98766;98767;98768 78946 78946 1 EGLGLAQK Unmodified 814.45487 0.45486751 470 O75175 CNOT3 CCR4-NOT transcription complex subunit 3 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 28.045 28.293 2 0.042602 30551 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 82.913 25.46 257400000 0 0 0 11736000 0 27803000 14469000 8227900 13422000 28918000 27140000 36628000 30350000 21681000 37022000 11658 470 10634 98769;98770;98771;98772;98773;98774;98775;98776;98777;98778;98779 78947;78948 78947 0 EGLGQGQSLEQLEALVQTK Unmodified 2027.0535 0.053498719 4624 Q9NSC5 HOMER3 Homer protein homolog 3 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 93.883 89.837 3 3.7823E-05 111665 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 40.634 34.671 17561000 0 17561000 0 0 0 0 0 0 0 0 0 0 0 0 0 11659 4624 10635 98780;98781 78949 78949 1 EGLGVNEVHYVDNQDCIDLIEAK Unmodified 2629.233 0.232996 5014 Q9UM54 MYO6 Unconventional myosin-VI yes yes 0 0 0 By MS/MS 2 0 1 1 85.246 77.116 3 0.0010679 100682 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.863 35.417 8178200 8178200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11660 5014 10636 98782 78950 78950 1 EGLISQDGSSLEALLR Unmodified 1686.8788 0.87882882 3660 Q92785 DPF2 Zinc finger protein ubi-d4 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 89.581 89.709 2 0.014812 103829 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.556 29.128 4291600 0 0 0 0 0 0 0 0 0 1692000 0 0 0 0 2599600 11661 3660 10637 98783;98784 78951;78952 78952 2 EGLISQDGSSLEALLRTDPLEK Unmodified 2370.2278 0.22783427 3660 Q92785 DPF2 Zinc finger protein ubi-d4 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 97.604 91.152 3 1.4311E-06 114994 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.398 59.643 42804000 14909000 27894000 0 0 0 0 0 0 0 0 0 0 0 0 0 11662 3660 10638 98785;98786 78953;78954 78954 2 EGLLDPNVK Unmodified 983.52876 0.52876073 326 O43414 ERI3 ERI1 exoribonuclease 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6 4 3 3 1 1 1 1 1 1 52.969 49.961 2 0.010372 56979 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 64.42 30.982 323610000 15792000 280570000 4245500 0 6454100 0 0 10148000 0 0 0 0 0 6399100 0 11663 326 10639 98787;98788;98789;98790;98791;98792 78955;78956;78957 78956 2 EGLLGLQNLLK Unmodified 1196.7129 0.71287311 3094;456 Q7Z460;O75122 CLASP1;CLASP2 CLIP-associating protein 1;CLIP-associating protein 2 no no 0 0 0 By MS/MS By matching By matching By matching By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 91.121 91.274 2 0.00052909 105711 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.279 46.923 20892000 0 0 0 0 0 0 0 1360000 1471200 3801300 2976800 2190500 0 1867600 7224800 11664 3094;456 10640 98793;98794;98795;98796;98797;98798;98799 78958;78959 78958 2 EGLLLWCQR Unmodified 1173.5965 0.59646314 356;971;1359 O43707;P12814;P35609 ACTN4;ACTN1;ACTN2 Alpha-actinin-4;Alpha-actinin-1;Alpha-actinin-2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 80.286 80.339 2 1.5783E-13 92502 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 169.37 120.01 48089000 0 0 0 1935800 0 0 0 1893100 0 0 10769000 19227000 3692900 10571000 0 11665 356;971;1359 10641 98800;98801;98802;98803;98804;98805;98806 78960;78961;78962;78963;78964 78960 5 EGLLLWCQRK Unmodified 1301.6914 0.69142616 356;971;1359 O43707;P12814;P35609 ACTN4;ACTN1;ACTN2 Alpha-actinin-4;Alpha-actinin-1;Alpha-actinin-2 no no 0 0 1 By MS/MS 10 0 1 1 67.994 68.488 3 0.04914 77982 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.908 11.919 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11666 356;971;1359 10642 98807 78965 78965 1 EGLMLDSHEELYK Unmodified 1562.7287 0.72865911 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 4 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 66.258 64.864 2;3 5.9664E-21 84123 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.49 100.95 209970000 21088000 113260000 5093100 2719100 2241000 4393100 2323500 4912800 2700300 6908600 6258600 8474800 4767900 6176300 18650000 11667 2392 10643 98808;98809;98810;98811;98812;98813;98814;98815;98816;98817;98818;98819;98820;98821;98822;98823 78966;78967;78968;78969;78970;78971;78972;78973;78974 78968 9 EGLMLDSHEELYK Oxidation (M) 1578.7236 0.72357373 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 58.616 58.778 2 0.0023934 66221 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 52.79 37.524 15699000 0 0 0 0 0 0 1645000 0 0 6313200 0 0 3194100 4547100 0 11668 2392 10643 98824;98825;98826;98827 78975;78976;78977 78976 3900 3 EGLNLPSQLAHR Unmodified 1333.7102 0.71024735 1425 P40938 RFC3 Replication factor C subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 2 2 1 2 1 2 2 2 2 1 2 62.458 62.583 2;3 2.5106E-05 71482 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 93.325 66.071 501340000 0 0 0 23101000 25772000 49723000 6095500 59486000 4485700 49027000 49210000 62558000 49965000 35201000 86715000 11669 1425 10644 98828;98829;98830;98831;98832;98833;98834;98835;98836;98837;98838;98839;98840;98841;98842;98843;98844;98845;98846;98847 78978;78979;78980;78981;78982;78983;78984;78985;78986;78987;78988;78989 78984 9 EGLPEDGTLYR Unmodified 1248.5986 0.59863121 3538 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 54.354 54.527 2 0.00033883 61425 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 96.668 82.028 180370000 0 0 0 0 16198000 0 15932000 14224000 10455000 25386000 25092000 28400000 24436000 20251000 0 11670 3538 10645 98848;98849;98850;98851;98852;98853;98854;98855;98856 78990;78991;78992 78990 3 EGLPVALDK Unmodified 940.52295 0.52294707 5076 Q9Y224 C14orf166 UPF0568 protein C14orf166 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 59.79 58.456 2 0.0093588 67483 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 66.962 49.576 1924800000 31716000 1198100000 14506000 46656000 42990000 47913000 48615000 41306000 40575000 61741000 73132000 78570000 53490000 54837000 90699000 11671 5076 10646 98857;98858;98859;98860;98861;98862;98863;98864;98865;98866;98867;98868;98869;98870;98871;98872 78993;78994;78995;78996;78997;78998;78999;79000;79001;79002;79003;79004 79003 9 EGLQNMEAR Oxidation (M) 1062.4764 0.47640759 1313 P31948 STIP1 Stress-induced-phosphoprotein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12.028 11.756 2 0.00066175 13623 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.15 53.123 280950000 0 138820000 1764100 3004600 3292600 3773800 6510000 5118000 4526300 6680500 10581000 31866000 5564800 20487000 38964000 11672 1313 10647 98873;98874;98875;98876;98877;98878;98879;98880;98881;98882;98883;98884;98885;98886 79005;79006;79007;79008;79009 79007 1955 4 EGLQNMEAR Unmodified 1046.4815 0.48149296 1313 P31948 STIP1 Stress-induced-phosphoprotein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 29.116 28.628 2 0.0034222 29689 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 94.114 61.76 616120000 0 321250000 1480200 0 8174800 7153600 10136000 7834000 5128800 14098000 46864000 0 20500000 43147000 130360000 11673 1313 10647 98887;98888;98889;98890;98891;98892;98893;98894;98895;98896;98897;98898 79010;79011;79012;79013;79014;79015;79016;79017;79018 79017 9 EGLQNMEARLAERK Unmodified 1643.8413 0.84133787 1313 P31948 STIP1 Stress-induced-phosphoprotein 1 yes yes 0 0 2 By MS/MS 2 0 1 1 62.05 53.795 3 0.059819 72815 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.524 31.044 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11674 1313 10648 98899 79019 79019 1 EGLQNMEARLAERK Oxidation (M) 1659.8363 0.8362525 1313 P31948 STIP1 Stress-induced-phosphoprotein 1 yes yes 0 1 2 By MS/MS By MS/MS 2 0 2 1 1 36.116 31.196 3 0.0058486 43425 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.071 26.089 51178000 49327000 0 1850900 0 0 0 0 0 0 0 0 0 0 0 0 11675 1313 10648 98900;98901 79020 79020 1955 0 EGLSGDALSSPSAPEPVVGTPDDK Unmodified 2324.102 0.10196505 3609 Q92503 SEC14L1 SEC14-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 1 2 2 2 2 2 2 2 72.341 72.407 2;3 1.0234E-93 82843 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 216.54 203.67 346670000 0 0 0 13603000 25506000 38937000 23728000 13829000 31029000 34227000 31677000 39640000 35064000 24592000 34836000 11676 3609 10649 98902;98903;98904;98905;98906;98907;98908;98909;98910;98911;98912;98913;98914;98915;98916;98917;98918;98919;98920;98921;98922;98923;98924 79021;79022;79023;79024;79025;79026;79027;79028;79029;79030;79031;79032;79033;79034;79035;79036;79037;79038;79039;79040;79041;79042;79043;79044 79028 24 EGLSGDALSSPSAPEPVVGTPDDKLDADYIK Unmodified 3142.5194 0.51938442 3609 Q92503 SEC14L1 SEC14-like protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 81.067 80.545 3 8.0819E-194 93538 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 185.27 179.55 297400000 0 36008000 0 2761900 22041000 9545500 9914700 32079000 12263000 30664000 26346000 43985000 16890000 21137000 33767000 11677 3609 10650 98925;98926;98927;98928;98929;98930;98931;98932;98933;98934;98935;98936;98937;98938 79045;79046;79047;79048;79049;79050;79051;79052;79053;79054;79055;79056;79057;79058;79059 79057 15 EGLSLIYEQLK Unmodified 1291.7024 0.702368 4490 Q9HAU5 UPF2 Regulator of nonsense transcripts 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 86.925 83.288 2 0.025439 103580 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 55.649 32.126 31146000 0 28081000 3065100 0 0 0 0 0 0 0 0 0 0 0 0 11678 4490 10651 98939;98940 79060;79061 79060 2 EGLTSIEEVTK Unmodified 1204.6187 0.61869795 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 59.006 59.563 2 0.00055755 67812 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 81.338 52.251 36821000 0 0 0 0 0 0 0 0 0 0 0 18174000 0 0 18647000 11679 2501 10652 98941;98942 79062 79062 1 EGLVMVEVRK Oxidation (M) 1174.638 0.63799361 3039 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 0 1 1 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 48.255 41.875 3 0.021028 58271 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 41.704 19.018 37705000 30772000 6933400 0 0 0 0 0 0 0 0 0 0 0 0 0 11680 3039 10653 98943;98944 79063;79064 79064 1 EGLVPVSEDPVAIK Unmodified 1451.7872 0.78716026 2439 Q14694 USP10 Ubiquitin carboxyl-terminal hydrolase 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77.688 76.822 2 2.3842E-05 88247 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 87.184 77.862 822720000 11842000 569040000 0 10716000 13475000 21508000 17458000 16317000 16176000 24890000 23999000 23880000 20424000 20545000 32454000 11681 2439 10654 98945;98946;98947;98948;98949;98950;98951;98952;98953;98954;98955;98956;98957;98958 79065;79066;79067;79068;79069;79070;79071;79072;79073;79074;79075;79076;79077;79078 79074 13 EGMEAAVEK Oxidation (M) 978.43281 0.43281144 4323 Q9H0D6 XRN2 5'-3' exoribonuclease 2 yes yes 0 1 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 2 2 1 3 3 2 1 2 2 7.8982 8.0462 2 0.0048857 4922 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 72.485 35.464 69809000 0 0 0 0 2339100 6017800 7342400 2291300 7732100 11018000 0 11583000 5028600 7809500 8647200 11682 4323 10655 98959;98960;98961;98962;98963;98964;98965;98966;98967;98968;98969;98970;98971;98972;98973;98974;98975;98976;98977 79079;79080;79081;79082;79083;79084;79085;79086 79083 5785 8 EGMEAAVEK Unmodified 962.4379 0.43789681 4323 Q9H0D6 XRN2 5'-3' exoribonuclease 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 21.862 22.11 2 0.0052698 22962 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 78.334 43.527 130840000 0 0 0 0 9364600 7447900 12899000 9493200 9019500 0 13573000 12725000 15946000 16984000 23389000 11683 4323 10655 98978;98979;98980;98981;98982;98983;98984;98985;98986;98987;98988 79087;79088;79089;79090;79091;79092 79089 6 EGMFNNANVLFK Oxidation (M) 1398.6602 0.66018561 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 7.29 3.65 3 2 9 1 3 1 1 1 1 1 1 1 1 1 1 72.046 70.997 2 4.4887E-05 89173 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.802 84.937 153020000 0 103070000 5023300 2144200 3274900 6961400 4108200 0 0 7730600 0 0 7497400 5087700 8128700 11684 643 10656 98989;98990;98991;98992;98993;98994;98995;98996;98997;98998;98999;99000;99001;99002 79093;79094;79095;79096;79097;79098;79099;79100 79095 780 8 EGMFNNANVLFK Unmodified 1382.6653 0.66527099 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 0 0 By MS/MS 10 0 1 1 80.99 81.205 2 4.1103E-05 93575 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 126.41 115.19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11685 643 10656 99003 79101 79101 1 EGMGQLVAANDG Unmodified 1160.5132 0.51318702 4113 Q9BRQ0 PYGO2 Pygopus homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 53.537 53.918 2 0.023378 60043 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.001 29.585 27529000 0 0 0 0 0 5827800 0 0 0 0 6848900 0 0 0 14852000 11686 4113 10657 99004;99005;99006 79102 79102 1 EGMNIVEAMER Oxidation (M) 1293.5693 0.56932169 1931 P62937 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.73 1.35 1 25 1 1 1 3 2 1 3 3 3 2 3 3 50.273 50.346 2 2.0791E-28 63396 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 176.33 161.12 982530000 0 7895900 0 5085800 3808400 9672700 12572000 6920600 12681000 0 168540000 190360000 17927000 104850000 442210000 11687 1931 10658 99007;99008;99009;99010;99011;99012;99013;99014;99015;99016;99017;99018;99019;99020;99021;99022;99023;99024;99025;99026;99027;99028;99029;99030;99031;99032 79103;79104;79105;79106;79107;79108;79109;79110;79111;79112;79113;79114;79115;79116;79117;79118;79119;79120;79121;79122;79123;79124;79125;79126;79127 79108 3107;3108 24 EGMNIVEAMER 2 Oxidation (M) 1309.5642 0.56423631 1931 P62937 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.64 2.9 2 2 18 4 1 1 2 2 1 1 2 2 2 2 2 29.914 29.313 2 1.0636E-06 31939 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 142.92 124.14 341410000 0 33216000 0 7019900 0 4951000 18329000 12355000 5643500 6271600 48969000 49106000 27943000 26893000 100710000 11688 1931 10658 99033;99034;99035;99036;99037;99038;99039;99040;99041;99042;99043;99044;99045;99046;99047;99048;99049;99050;99051;99052;99053;99054 79128;79129;79130;79131;79132;79133;79134;79135;79136;79137;79138;79139;79140;79141;79142;79143;79144;79145;79146;79147 79137 3107;3108 19 EGMNIVEAMER Unmodified 1277.5744 0.57440707 1931 P62937 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 74.312 74.423 2 1.0746E-05 85321 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 160.53 148.68 1675900000 0 0 0 0 12192000 0 19157000 31944000 0 0 297420000 0 0 167780000 1147400000 11689 1931 10658 99055;99056;99057;99058;99059;99060;99061;99062;99063 79148;79149;79150;79151;79152;79153;79154;79155 79150 8 EGMQLISEKPETEAVVK Oxidation (M) 1902.9608 0.96084389 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS 8.25 3.03 1 3 1 1 1 1 53.118 51.34 3 0.00016103 57934 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 59.513 48.569 104430000 0 70827000 0 0 14307000 0 19293000 0 0 0 0 0 0 0 0 11690 2047 10659 99064;99065;99066;99067 79156;79157;79158;79159 79158 3317 4 EGMQLISEKPETEAVVK Unmodified 1886.9659 0.96592926 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 3 1 70.379 64.728 2;3 9.3256E-27 83293 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.12 102.14 372060000 13962000 352500000 5597700 0 0 0 0 0 0 0 0 0 0 0 0 11691 2047 10659 99068;99069;99070;99071;99072 79160;79161;79162;79163 79161 3 EGMRANNPEQNRLSECEEQAK Unmodified 2489.1023 0.10233295 3039 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 0 0 2 By matching By MS/MS 2 0 2 1 1 35.926 31.005 4 0.0034054 39418 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 35.834 28.295 12130000 5560500 0 6569900 0 0 0 0 0 0 0 0 0 0 0 0 11692 3039 10660 99073;99074 79164 79164 1 EGMTAFVEK Oxidation (M) 1026.4692 0.46919694 1267 P30084 ECHS1 Enoyl-CoA hydratase, mitochondrial yes yes 0 1 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 29.21 24.44 2 0.020067 34237 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.485 43.972 87814000 5141400 82673000 0 0 0 0 0 0 0 0 0 0 0 0 0 11693 1267 10661 99075;99076;99077 79165;79166;79167 79167 1865 3 EGMTAFVEK Unmodified 1010.4743 0.47428232 1267 P30084 ECHS1 Enoyl-CoA hydratase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 51.718 46.871 2 0.01963 60969 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.221 29.796 204340000 0 201050000 3293700 0 0 0 0 0 0 0 0 0 0 0 0 11694 1267 10661 99078;99079 79168;79169;79170 79168 3 EGMVRCDTAVGTPDYISPEVLK Unmodified 2436.1665 0.16649634 2296 Q13464 ROCK1 Rho-associated protein kinase 1 yes yes 0 0 1 By MS/MS 2 0 1 1 82.078 77.374 3 0.054231 96271 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 35.179 28.065 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11695 2296 10662 99080 79171 79171 1 EGMVRCDTAVGTPDYISPEVLK Oxidation (M) 2452.1614 0.16141096 2296 Q13464 ROCK1 Rho-associated protein kinase 1 yes yes 0 1 1 By MS/MS 3 0 1 1 77.872 74.453 3 0.00072055 89338 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 54.223 46.325 8118100 0 8118100 0 0 0 0 0 0 0 0 0 0 0 0 0 11696 2296 10662 99081 79172 79172 3759 1 EGNAVAVR Unmodified 814.42972 0.42971539 2284 Q13418 ILK Integrin-linked protein kinase yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 11.079 11.221 2 0.029513 9294 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.091 23.12 68320000 0 0 0 4530600 3858000 9534000 6566100 5927100 4556700 6062300 6132700 5089400 4699500 3461800 7902300 11697 2284 10663 99082;99083;99084;99085;99086;99087;99088;99089;99090;99091;99092;99093 79173;79174;79175 79174 2 EGNELFK Unmodified 835.40758 0.40758296 4387 Q9H3U1 UNC45A Protein unc-45 homolog A yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 36.965 31.292 2 0.02978 41290 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.262 38.821 192180000 8266000 183920000 0 0 0 0 0 0 0 0 0 0 0 0 0 11698 4387 10664 99094;99095 79176 79176 1 EGNEMEGEELDPLDAYMEEVK 2 Oxidation (M) 2458.004 0.0039668475 3041 Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 80.709 80.839 2 3.1019E-48 93202 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 116.86 116.86 73791000 0 0 0 0 0 11005000 0 0 8350700 7761200 9197700 14182000 6992900 6147900 10153000 11699 3041 10665 99096;99097;99098;99099;99100;99101;99102;99103 79177;79178;79179;79180;79181;79182;79183;79184 79179 4652;4653 8 EGNEMEGEELDPLDAYMEEVK Oxidation (M) 2442.0091 0.0090522254 3041 Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 0 1 0 By MS/MS By MS/MS 6 4 1 1 1 1 90.167 87.787 2 0 108223 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 325.09 315.29 34636000 0 31992000 0 0 0 0 0 0 0 0 0 0 0 0 2643500 11700 3041 10665 99104;99105 79185;79186 79185 4652;4653 2 EGNEMEGEELDPLDAYMEEVK Unmodified 2426.0141 0.014137603 3041 Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 93.231 89.169 2 0.0010808 110616 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.409 73.865 34305000 0 34305000 0 0 0 0 0 0 0 0 0 0 0 0 0 11701 3041 10665 99106;99107 79187;79188 79187 2 EGNENLLSK Unmodified 1002.4982 0.49818889 4584 Q9NR09 BIRC6 Baculoviral IAP repeat-containing protein 6 yes yes 0 0 0 By MS/MS 2 0 1 1 28.86 24.513 2 0.041397 32247 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.688 36.339 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11702 4584 10666 99108 79189 79189 1 EGNEQLTEEER Unmodified 1332.5794 0.57935233 3388 Q8NB90 SPATA5 Spermatogenesis-associated protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 19.623 19.886 2 0.0088702 20063 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 51.092 38.515 23076000 0 0 0 2146700 0 2204900 2698800 0 0 2468000 2946000 3024100 2899400 1718600 2969500 11703 3388 10667 99109;99110;99111;99112;99113;99114;99115;99116;99117 79190;79191;79192 79190 3 EGNFDIVSGTR Unmodified 1193.5677 0.56766543 429 O60762 DPM1 Dolichol-phosphate mannosyltransferase subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.898 52.044 2 0.0089495 58630 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 60.518 38.432 81591000 0 0 0 5885200 4464200 7122100 5200700 5571200 4652800 8806200 9047000 11179000 8179700 5733500 5749600 11704 429 10668 99118;99119;99120;99121;99122;99123;99124;99125;99126;99127;99128;99129 79193;79194;79195;79196;79197 79195 5 EGNGTVMGAELR Unmodified 1232.5819 0.58193529 815 P05976;P08590 MYL1;MYL3 Myosin light chain 1/3, skeletal muscle isoform;Myosin light chain 3 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 41.514 41.089 2 2.5993E-05 46448 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 94.363 0 1413100000 0 19807000 0 104600000 118970000 154770000 136830000 145780000 77420000 138430000 233050000 0 159270000 124150000 0 11705 815 10669 99130;99131;99132;99133;99134;99135;99136;99137;99138;99139;99140 79198;79199;79200;79201;79202;79203;79204;79205;79206;79207 79206 8 EGNNPAENGDAK Unmodified 1214.5164 0.51635814 805 P05204 HMGN2 Non-histone chromosomal protein HMG-17 yes yes 0 0 0 By MS/MS By MS/MS 2 0.707 1 2 1 2 2 31.641 30.449 2 0.00082954 6354 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.38 99.16 162880000 126750000 36126000 0 0 0 0 0 0 0 0 0 0 0 0 0 11706 805 10670 99141;99142;99143;99144 79208;79209;79210;79211 79211 3 EGNPAEINVERDEK Unmodified 1598.7536 0.7536283 4230 Q9BXP5 SRRT Serrate RNA effector molecule homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.76 3.87 6 1 10 2 3 2 1 1 1 1 1 1 1 1 1 1 33.581 31.705 2;3 9.3256E-05 33821 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.55 74.769 739910000 71519000 278540000 10662000 26312000 27829000 34479000 0 28059000 0 50355000 49448000 44114000 35520000 30992000 52077000 11707 4230 10671 99145;99146;99147;99148;99149;99150;99151;99152;99153;99154;99155;99156;99157;99158;99159;99160;99161 79212;79213;79214;79215;79216;79217;79218;79219;79220;79221;79222;79223;79224;79225;79226;79227;79228;79229;79230;79231;79232 79218 20 EGNPEEDLTADK Unmodified 1316.5732 0.57320432 1407 P40121 CAPG Macrophage-capping protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.65 3.66 1 3 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 38.259 37.566 2 2.0536E-05 35392 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 109.42 101.77 1037800000 268270000 107540000 2389500 30768000 17588000 80541000 32911000 20343000 22768000 72632000 75373000 77853000 43435000 63760000 121650000 11708 1407 10672 99162;99163;99164;99165;99166;99167;99168;99169;99170;99171;99172;99173;99174;99175;99176;99177;99178 79233;79234;79235;79236;79237;79238;79239;79240;79241;79242;79243;79244;79245;79246;79247;79248;79249;79250 79245 18 EGNTEQPVQTSK Unmodified 1316.6208 0.62082322 4820 Q9P2K3 RCOR3 REST corepressor 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 10.715 10.856 2 2.6492E-08 8915 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 132.78 120.93 106070000 0 0 0 5566700 4893900 8691500 9047500 5575800 6551300 8435900 10514000 15073000 9379900 9481200 12855000 11709 4820 10673 99179;99180;99181;99182;99183;99184;99185;99186;99187;99188;99189;99190 79251;79252;79253;79254;79255;79256;79257;79258;79259;79260;79261;79262 79254 12 EGNVPNIIIAGPPGTGK Unmodified 1632.8835 0.88352026 1348 P35250 RFC2 Replication factor C subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.753 76.811 2 1.028E-13 89116 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 115.12 101.45 1142500000 0 0 0 57802000 65550000 85360000 84570000 79122000 73224000 122530000 129900000 130240000 88971000 89654000 135620000 11710 1348 10674 99191;99192;99193;99194;99195;99196;99197;99198;99199;99200;99201;99202 79263;79264;79265;79266;79267;79268 79267 5 EGNVQITAETLLK Unmodified 1414.7668 0.76675917 2800 Q5THK1 PRR14L Protein PRR14L yes yes 0 0 0 By MS/MS 2 0 1 1 81.279 76.574 2 0.014225 95300 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 55.801 37.489 20632000 0 20632000 0 0 0 0 0 0 0 0 0 0 0 0 0 11711 2800 10675 99203 79269 79269 1 EGNYAIVANVESMDYDPLVVK Oxidation (M) 2341.1148 0.11477835 3733 Q96A65 EXOC4 Exocyst complex component 4 yes yes 0 1 0 By MS/MS 2 0 1 1 90.466 85.57 3 5.0184E-09 106301 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.665 76.687 27443000 0 27443000 0 0 0 0 0 0 0 0 0 0 0 0 0 11712 3733 10676 99204 79270 79270 5301 1 EGPAVVGQFIQDVK Unmodified 1485.7827 0.78274359 3170 Q86VP6 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 84.004 82.887 2 1.8618E-08 96091 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 123.67 101.14 3127300000 43206000 2481700000 36034000 7362500 15990000 78096000 20165000 23070000 21383000 66926000 48010000 66206000 29089000 49813000 140190000 11713 3170 10677 99205;99206;99207;99208;99209;99210;99211;99212;99213;99214;99215;99216;99217;99218;99219;99220 79271;79272;79273;79274;79275;79276;79277;79278;79279;79280;79281;79282;79283;79284;79285;79286;79287 79271 17 EGPDLDRPGSDR Unmodified 1312.6008 0.60075648 3102 Q7Z4V5 HDGFRP2 Hepatoma-derived growth factor-related protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.198 22.362 3 0.0041794 22864 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 38.674 29.018 54588000 0 0 0 3177100 2480800 5773900 4001500 3436300 3477900 3922300 7900800 0 7619100 4088500 8709800 11714 3102 10678 99221;99222;99223;99224;99225;99226;99227;99228;99229;99230;99231;99232 79288;79289;79290;79291;79292;79293;79294;79295 79290 8 EGPDLDRPGSDRQER Unmodified 1725.803 0.80303811 3102 Q7Z4V5 HDGFRP2 Hepatoma-derived growth factor-related protein 2 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 1 2 2 2 2 2 2 2 1 19.471 19.661 3;4 0.0048842 19956 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 63.29 54.975 281250000 0 0 0 16802000 14235000 25631000 7821900 15830000 22128000 31621000 27274000 43109000 37853000 19503000 19438000 11715 3102 10679 99233;99234;99235;99236;99237;99238;99239;99240;99241;99242;99243;99244;99245;99246;99247;99248;99249;99250;99251;99252;99253;99254 79296;79297;79298;79299;79300;79301;79302 79301 6 EGPEGNDIRR Unmodified 1141.5476 0.54759869 2053 Q01433 AMPD2 AMP deaminase 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 10.905 11.061 3 0.0053576 9298 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.54 17.248 57707000 0 0 0 2842900 2478700 0 4800000 3851700 2420100 5232200 5658900 2218100 4597500 7506900 16100000 11716 2053 10680 99255;99256;99257;99258;99259;99260;99261;99262;99263;99264;99265 79303;79304;79305;79306;79307;79308;79309;79310;79311 79305 9 EGPEPPEEVPPPTTPPVPK Unmodified 1993.0044 0.004423261 1546 P48634 PRRC2A Protein PRRC2A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 2 2 2 2 1 2 2 2 2 2 2 69.207 69.309 2;3 1.0158E-05 79031 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.365 74.313 127790000 0 0 0 4778900 7029300 10232000 9818900 8859600 5551000 10746000 15271000 15188000 10623000 11117000 18574000 11717 1546 10681 99266;99267;99268;99269;99270;99271;99272;99273;99274;99275;99276;99277;99278;99279;99280;99281;99282;99283;99284;99285;99286;99287 79312;79313;79314;79315;79316;79317;79318;79319;79320;79321;79322;79323;79324 79316 10 EGPESRPEGAAVAATPTLPR Unmodified 2005.0229 0.022867292 5130 Q9Y2Y9 KLF13 Krueppel-like factor 13 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 55.392 55.239 3 0.0014147 62596 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 38.878 28.82 31597000 0 0 0 6577500 7137100 0 8144300 6520200 3218000 0 0 0 0 0 0 11718 5130 10682 99288;99289;99290;99291;99292 79325;79326;79327;79328 79325 4 EGPFYPTLR Unmodified 1078.5447 0.54474515 4990 Q9ULC4 MCTS1 Malignant T-cell-amplified sequence 1 yes yes 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 65.495 65.576 2 0.025904 74526 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.04 37.003 69554000 0 0 0 3912900 3000600 5508500 4159100 4019000 0 4777700 8280800 8307100 4432600 6995400 16160000 11719 4990 10683 99293;99294;99295;99296;99297;99298;99299;99300;99301;99302;99303 79329 79329 1 EGPGEAIVR Unmodified 926.48214 0.48214489 1315 P32004 L1CAM Neural cell adhesion molecule L1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 29.557 29.754 2 0.018109 32300 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 55.112 29.173 42161000 0 0 0 2753100 2520700 3292500 2475000 2327500 0 3647500 4172400 6945000 4470500 3630200 5926700 11720 1315 10684 99304;99305;99306;99307;99308;99309;99310;99311;99312;99313;99314 79330;79331;79332 79330 3 EGPGRPPLDGR Unmodified 1149.5891 0.58906958 5050 Q9UPN6 SCAF8 Protein SCAF8 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 23.209 23.4 3 0.0015325 23740 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 68.44 52.811 124480000 0 0 0 8157000 8856600 5588400 11676000 12360000 8000500 8104300 18074000 15296000 0 10705000 17662000 11721 5050 10685 99315;99316;99317;99318;99319;99320;99321;99322;99323;99324;99325 79333;79334;79335;79336;79337;79338;79339;79340;79341;79342;79343 79341 10 EGPITEDFFK Unmodified 1181.5605 0.56045479 5121 Q9Y2V7 COG6 Conserved oligomeric Golgi complex subunit 6 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 77.134 77.21 2 0.022591 89157 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 46.001 36.221 47118000 0 0 0 2621000 0 4739500 3875300 0 0 5159700 4509500 4881800 4668800 3360700 13301000 11722 5121 10686 99326;99327;99328;99329;99330;99331;99332;99333;99334 79344 79344 1 EGPLCDELIR Unmodified 1200.5809 0.58087266 2481 Q15029 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 15 1 1 1 1 1 1 1 2 2 1 1 2 54.875 55.033 2;3 0.0011859 73841 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 108.98 97.13 302420000 0 0 0 13347000 13206000 14658000 12910000 18122000 15168000 26464000 29176000 53289000 25704000 30612000 49765000 11723 2481 10687 99335;99336;99337;99338;99339;99340;99341;99342;99343;99344;99345;99346;99347;99348;99349 79345;79346;79347;79348;79349;79350;79351;79352;79353;79354;79355 79353 11 EGPLLSDSHVAFR Unmodified 1426.7205 0.72047768 976 P13056 NR2C1 Nuclear receptor subfamily 2 group C member 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 62.866 63.121 3 0.010087 72146 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 36.944 22.068 75791000 0 0 0 0 0 7058600 6031700 0 3787500 0 9621100 15996000 10360000 7708700 15228000 11724 976 10688 99350;99351;99352;99353;99354;99355;99356;99357 79356;79357;79358 79358 3 EGPLSVFGDR Unmodified 1075.5298 0.52982336 1067 P17987 TCP1 T-complex protein 1 subunit alpha yes yes 0 0 0 By MS/MS 10 0 1 1 93.346 93.487 2 0.040246 108391 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.982 36.251 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11725 1067 10689 99358 79359 79359 1 EGPPPASPAQLLSK Unmodified 1390.7456 0.7456298 2672 Q3LXA3 DAK Bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase (cyclizing);ATP-dependent dihydroxyacetone kinase;FAD-AMP lyase (cyclizing) yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.24 2 1 10 3 1 1 1 1 1 1 1 2 1 68.044 66.973 2 1.1339E-18 86216 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.28 98.769 753110000 0 701900000 0 2319100 0 5477700 3100300 0 0 3321800 6315700 6423900 2671600 8379600 13203000 11726 2672 10690 99359;99360;99361;99362;99363;99364;99365;99366;99367;99368;99369;99370;99371 79360;79361;79362;79363;79364;79365;79366;79367;79368;79369;79370;79371 79364 12 EGPSGSGDSQLSASSR Unmodified 1520.6703 0.6702926 2189 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.298 20.503 2 1.32E-19 19914 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 123.95 65.578 252200000 0 0 0 19988000 18024000 18050000 18611000 12789000 21569000 0 24476000 41360000 24916000 20796000 31621000 11727 2189 10691 99372;99373;99374;99375;99376;99377;99378;99379;99380;99381;99382;99383 79372;79373;79374;79375;79376;79377;79378;79379;79380;79381;79382;79383 79379 12 EGPSLGPPPVASALSR Unmodified 1533.8151 0.81510635 463 O75150 RNF40 E3 ubiquitin-protein ligase BRE1B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.958 77.02 2 2.1377E-07 88883 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 103.75 94.319 373830000 0 0 0 15780000 19771000 19187000 28179000 26503000 22357000 32265000 39512000 40780000 32075000 33941000 63482000 11728 463 10692 99384;99385;99386;99387;99388;99389;99390;99391;99392;99393;99394;99395 79384;79385;79386;79387;79388;79389;79390;79391;79392;79393;79394 79386 10 EGPTLSVPMVQGECLLK Unmodified 1856.9376 0.93760602 4086 Q9BQ52 ELAC2 Zinc phosphodiesterase ELAC protein 2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 90.61 86.55 2 2.7992E-18 107604 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.69 96.327 130790000 0 130790000 0 0 0 0 0 0 0 0 0 0 0 0 0 11729 4086 10693 99396;99397 79395 79395 1 EGPVASPPFMDLEQAVLPAVIPK Oxidation (M) 2420.2661 0.26613403 4393 Q9H4A3 WNK1 Serine/threonine-protein kinase WNK1 yes yes 0 1 0 By MS/MS 2 0 1 1 99.867 95.154 2 1.8137E-18 117816 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.682 94.052 28228000 0 28228000 0 0 0 0 0 0 0 0 0 0 0 0 0 11730 4393 10694 99398 79396 79396 5855 1 EGPVASPPFMDLEQAVLPAVIPK Unmodified 2404.2712 0.27121941 4393 Q9H4A3 WNK1 Serine/threonine-protein kinase WNK1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 100.84 96.778 3 0.0015807 119435 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 38.67 35.984 129670000 0 129670000 0 0 0 0 0 0 0 0 0 0 0 0 0 11731 4393 10694 99399;99400 79397 79397 1 EGPVLATSSGAGVFK Unmodified 1418.7405 0.74054442 4393 Q9H4A3 WNK1 Serine/threonine-protein kinase WNK1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 67.88 66.353 2 1.5883E-44 80768 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 153.95 132.55 907800000 12212000 418830000 8125800 29958000 31950000 36476000 41843000 49011000 32848000 0 0 73744000 62251000 53165000 57382000 11732 4393 10695 99401;99402;99403;99404;99405;99406;99407;99408;99409;99410;99411;99412;99413;99414;99415 79398;79399;79400;79401;79402;79403;79404;79405;79406;79407;79408;79409;79410;79411;79412;79413;79414;79415 79404 16 EGPVQFEEDPFGLDK Unmodified 1705.7835 0.78353145 2320 Q13573 SNW1 SNW domain-containing protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching 10 0 6 1 1 1 1 1 1 83.248 83.356 2 0.0026391 96700 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 65.408 55.099 50334000 0 0 0 0 0 5216200 0 0 0 9936600 0 6822400 5355900 5122200 17881000 11733 2320 10696 99416;99417;99418;99419;99420;99421 79416;79417 79417 2 EGPYDVVVLPGGNLGAQNLSESAAVK Unmodified 2583.318 0.31804626 4015 Q99497 PARK7 Protein deglycase DJ-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.11 3.91 1 9 1 7 3 5 3 1 1 1 1 1 1 1 89.36 87.887 2;3;4 1.2029E-206 108134 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 170.56 156.97 12891000000 87947000 12417000000 24923000 0 3341100 0 0 0 0 11909000 60820000 54136000 0 23406000 207680000 11734 4015 10697 99422;99423;99424;99425;99426;99427;99428;99429;99430;99431;99432;99433;99434;99435;99436;99437;99438;99439 79418;79419;79420;79421;79422;79423;79424;79425;79426;79427;79428;79429;79430;79431;79432;79433;79434;79435;79436;79437;79438;79439 79421 20 EGPYSISVLYGDEEVPR Unmodified 1908.9105 0.91052288 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.465 82.526 2 0.00040549 95990 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 60.157 29.826 144320000 0 0 0 2152600 4953900 11209000 4754400 7425000 5210600 18225000 16984000 17796000 4064900 8882800 42658000 11735 1124 10698 99440;99441;99442;99443;99444;99445;99446;99447;99448;99449;99450;99451 79440;79441;79442;79443;79444;79445;79446;79447;79448 79446 9 EGQEDQGLTK Unmodified 1103.5095 0.50948185 1208;687 O95758;P26599 PTBP3;PTBP1 Polypyrimidine tract-binding protein 3;Polypyrimidine tract-binding protein 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 10.44 10.581 2 3.9208E-23 9101 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 172.23 155.69 1109700000 0 0 0 65195000 42936000 75297000 110130000 60537000 65555000 96258000 90430000 83987000 98230000 118340000 202820000 11736 687;1208 10699 99452;99453;99454;99455;99456;99457;99458;99459;99460;99461;99462;99463 79449;79450;79451;79452;79453;79454;79455;79456;79457;79458;79459;79460;79461;79462;79463 79461 14 EGQEIASVSDDHTCR Unmodified 1702.7217 0.72167625 3447 Q8NFH4 NUP37 Nucleoporin Nup37 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 26.38 26.68 3 0.0039886 27360 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.597 34.207 18370000 0 0 0 0 910720 1407300 0 0 0 0 3555100 5188400 0 2741500 4566800 11737 3447 10700 99464;99465;99466;99467;99468;99469 79464;79465 79464 2 EGQGEGETQEAAAATAAAR Unmodified 1816.8187 0.81874776 1802 P58107 EPPK1 Epiplakin yes no 0 0 0 By matching By MS/MS By matching By matching By MS/MS By matching By matching 10 0 7 1 1 1 1 1 1 1 35.307 35.502 2 8.6477E-31 38794 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 106.13 91.158 37292000 0 0 0 4409800 2807200 5140300 0 0 0 0 4487800 7721200 5141500 0 7584000 11738 1802 10701 99470;99471;99472;99473;99474;99475;99476 79466;79467;79468 79467 3 EGQGNLPVR Unmodified 968.50394 0.50394297 2318 Q13564 NAE1 NEDD8-activating enzyme E1 regulatory subunit yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 25.177 25.447 2 0.014024 26778 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 58.917 42.763 10515000 0 0 0 0 0 2118200 0 0 0 0 4221600 0 0 4175600 0 11739 2318 10702 99477;99478;99479 79469 79469 1 EGQGNLPVRGTIPDMIADSGK Unmodified 2154.0739 0.073916585 2318 Q13564 NAE1 NEDD8-activating enzyme E1 regulatory subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 4 3.46 3 1 1 1 1 1 79.898 76.118 3 1.5556E-30 93281 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 95.48 82.632 106240000 18676000 55765000 21020000 0 0 0 0 0 0 0 0 0 0 0 10784000 11740 2318 10703 99480;99481;99482;99483 79470;79471;79472;79473;79474 79474 5 EGQPSPADEK Unmodified 1056.4724 0.47236807 484 O75351 VPS4B Vacuolar protein sorting-associated protein 4B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 7.932 7.7693 2 0.0095404 5848 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 57.59 40.204 36674000 4705800 0 0 1409600 917990 2643000 1928600 1609200 1904500 4129500 5000000 2907000 2309200 3111200 4098700 11741 484 10704 99484;99485;99486;99487;99488;99489;99490;99491;99492;99493;99494;99495;99496 79475;79476;79477;79478;79479;79480;79481;79482 79476 8 EGQRPTQPVYQIQNR Unmodified 1812.9231 0.92309367 4340 Q9H0W8 SMG9 Protein SMG9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 37.476 37.784 3 2.5732E-06 40697 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.499 68.345 51083000 0 0 0 0 0 4966600 6744900 4868100 4311000 6865400 5383200 6176000 0 4719300 7048200 11742 4340 10705 99497;99498;99499;99500;99501;99502;99503;99504;99505 79483;79484;79485;79486;79487;79488;79489;79490 79486 8 EGREQGTGNSYTDTSGPK Unmodified 1882.8293 0.82931244 4894 Q9UHB7 AFF4 AF4/FMR2 family member 4 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 14.682 14.874 3 1.0161E-05 13939 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 54.368 49.051 40512000 0 0 0 2945600 1728700 0 3570600 0 2947500 0 5445800 7101500 4050000 3158800 9563000 11743 4894 10706 99506;99507;99508;99509;99510;99511;99512;99513;99514;99515 79491;79492;79493;79494;79495;79496;79497 79494 7 EGRGESENAGTNQETR Unmodified 1733.7565 0.75648185 2149 Q08170 SRSF4 Serine/arginine-rich splicing factor 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.0362 6.1536 3 2.6908E-06 3374 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.259 76.355 31436000 0 0 0 2033900 1475500 2027000 1717700 1147000 1713500 2621500 3645200 4423600 2737400 3020600 4873100 11744 2149 10707 99516;99517;99518;99519;99520;99521;99522;99523;99524;99525;99526;99527 79498;79499;79500;79501;79502;79503;79504;79505;79506;79507;79508 79501 11 EGRGNYSTDQLCVLDNVK Unmodified 2066.9691 0.96911716 3100 Q7Z4Q2 HEATR3 HEAT repeat-containing protein 3 yes yes 0 0 1 By MS/MS 2 0 1 1 70.276 66.701 3 0.0069222 82551 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 38.915 34.599 8747500 0 0 8747500 0 0 0 0 0 0 0 0 0 0 0 0 11745 3100 10708 99528 79509 79509 1 EGRLQEVIETLLSLEK Unmodified 1856.0255 0.025493054 130 O00232 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 103.86 97.418 3 0.0040104 122955 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 52.172 43.623 5370000 2857000 2513000 0 0 0 0 0 0 0 0 0 0 0 0 0 11746 130 10709 99529;99530 79510;79511 79510 1 EGRPPEPTPAK Unmodified 1177.6091 0.60913632 5066 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.236 13.391 3 0.0017861 12645 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 54.259 38.63 200750000 0 0 0 9327300 11391000 14765000 12472000 10895000 10280000 18094000 16116000 26675000 23753000 20548000 26434000 11747 5066 10710 99531;99532;99533;99534;99535;99536;99537;99538;99539;99540;99541;99542 79512;79513;79514;79515;79516;79517;79518;79519;79520;79521 79512 5 EGRQVGQVAK Unmodified 1070.5833 0.58325592 3975 Q96RS6 NUDCD1 NudC domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 8.7011 5.7001 2 0.0055494 7454 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 113.66 52.748 150760000 79823000 0 70940000 0 0 0 0 0 0 0 0 0 0 0 0 11748 3975 10711 99543;99544 79522;79523 79523 2 EGRWVIYNDQK Unmodified 1406.6943 0.69426293 1488 P45974 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes yes 0 0 1 By MS/MS 2 0 1 1 56.498 48.35 3 0.01296 65752 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.65 42.729 96900000 96900000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11749 1488 10712 99545 79524 79524 1 EGSALSHVRK Unmodified 1082.5833 0.58325592 2673 Q3MHD2 LSM12 Protein LSM12 homolog yes yes 0 0 1 By MS/MS 10 0 1 1 7.8544 8.2133 2 0.021287 6266 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 81.972 64.732 3169600 0 0 0 0 0 0 0 0 0 0 3169600 0 0 0 0 11750 2673 10713 99546 79525 79525 1 EGSANNLFVGSSSLVDLCK Unmodified 1995.9572 0.95715549 5331 yes yes 0 0 0 By MS/MS 2 0 1 1 80.578 78.05 3 0.015405 94525 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 17.296 0 + 53767000 0 0 53767000 0 0 0 0 0 0 0 0 0 0 0 0 11751 5331 10714 99547 79526 79526 1 EGSASTEVLR Unmodified 1047.5197 0.51965261 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 0 By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.481 24.683 2 0.0071865 25494 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 63.076 22.972 112460000 0 0 0 7726500 7790800 7447300 6453100 4274000 4123000 9264500 7979600 16707000 17529000 9957900 13210000 11752 528 10715 99548;99549;99550;99551;99552;99553;99554;99555;99556;99557;99558;99559 79527;79528;79529;79530;79531;79532;79533 79529 6 EGSASTEVLRTEAEQCK Unmodified 1893.8738 0.87381979 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.609 38.789 3 1.4024E-28 42876 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 114.63 103.19 377670000 0 0 0 23155000 16845000 27322000 21695000 24161000 24079000 30242000 39915000 44130000 27199000 30750000 68179000 11753 528 10716 99560;99561;99562;99563;99564;99565;99566;99567;99568;99569;99570;99571 79534;79535;79536;79537;79538;79539;79540;79541;79542;79543;79544;79545;79546;79547;79548;79549 79538 16 EGSEFSFSDGEVAEK Unmodified 1616.6842 0.68421133 4197 Q9BVS4 RIOK2 Serine/threonine-protein kinase RIO2 yes yes 0 0 0 By MS/MS 2 0 1 1 65.813 59.896 2 0.033846 76607 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 39.394 21.958 18610000 0 18610000 0 0 0 0 0 0 0 0 0 0 0 0 0 11754 4197 10717 99572 79550 79550 1 EGSERMTELADVFSGVK Unmodified 1853.8829 0.88292792 2183 Q12768 KIAA0196 WASH complex subunit strumpellin yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 88.072 81.586 3 0.0018798 103377 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 55.589 49.474 41065000 11079000 29985000 0 0 0 0 0 0 0 0 0 0 0 0 0 11755 2183 10718 99573;99574 79551;79552 79551 2 EGSGDGGRAELNPWPEYIYTR Unmodified 2366.0927 0.092737771 1209 P26639 TARS Threonine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS 10 0 1 1 79.895 80.125 3 1.3186E-09 92316 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.452 63.577 35201000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35201000 11756 1209 10719 99575 79553 79553 0 EGSGGFRK Unmodified 836.41407 0.41406533 4031 Q99598 TSNAX Translin-associated protein X yes yes 0 0 1 By MS/MS 2 0 1 1 1.7344 -0.41813 2 0.047945 1199 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 100.19 53.837 10647000 0 0 10647000 0 0 0 0 0 0 0 0 0 0 0 0 11757 4031 10720 99576 79554 79554 0 EGSGLFPDLLVR Unmodified 1301.698 0.69795133 3204 Q86Y56 DNAAF5 Dynein assembly factor 5, axonemal yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 89.563 89.615 2 2.4435E-05 104142 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 92.538 53.234 83998000 0 0 0 3119100 0 14043000 0 0 9151400 0 0 14230000 7611500 9928900 25914000 11758 3204 10721 99577;99578;99579;99580;99581;99582;99583 79555;79556;79557;79558;79559;79560 79560 6 EGSGLFPDLLVRETEAVIHK Unmodified 2209.1743 0.17428256 3204 Q86Y56 DNAAF5 Dynein assembly factor 5, axonemal yes yes 0 0 1 By MS/MS 3 0 1 1 97.063 93.754 4 0.011683 112381 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 32.926 28.216 6955500 0 6955500 0 0 0 0 0 0 0 0 0 0 0 0 0 11759 3204 10722 99584 79561 79561 1 EGSGNPTPLINPLAGR Unmodified 1591.8318 0.83181904 4779 Q9NZN8 CNOT2 CCR4-NOT transcription complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.468 76.526 2 1.3259E-23 87428 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 149.38 143.41 462670000 0 0 0 21431000 28068000 28502000 32153000 38675000 26914000 40020000 53031000 50434000 43797000 35165000 64480000 11760 4779 10723 99585;99586;99587;99588;99589;99590;99591;99592;99593;99594;99595;99596 79562;79563;79564;79565;79566;79567;79568;79569;79570;79571;79572;79573 79569 11 EGSIILDAIREYEEVEVLLSDK Unmodified 2519.3007 0.30066486 4274 Q9BZQ6 EDEM3 ER degradation-enhancing alpha-mannosidase-like protein 3 yes yes 0 0 1 By MS/MS 2 0 1 1 104.82 96.689 3 2.9276E-11 124163 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.946 81.136 6646300 6646300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11761 4274 10724 99597 79574 79574 1 EGSITQGTPLK Unmodified 1129.5979 0.59790293 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 40.291 35.432 2 0.00046671 46015 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.65 61.295 68703000 0 68703000 0 0 0 0 0 0 0 0 0 0 0 0 0 11762 5262 10725 99598;99599 79575 79575 1 EGSIWNHQPCFLK Unmodified 1614.7613 0.76129664 2208 Q12907 LMAN2 Vesicular integral-membrane protein VIP36 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 73.288 72.104 3 0.014535 94584 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 41.242 30.298 22007000 8531500 0 0 0 0 0 0 1897200 2193100 2145500 0 0 0 1799800 5439700 11763 2208 10726 99600;99601;99602;99603;99604;99605 79576;79577 79577 2 EGSLSNTWNEK Unmodified 1263.5731 0.57314474 2801 Q5TKA1 LIN9 Protein lin-9 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.169 36.349 2 0.010693 40188 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 63.426 46.187 71922000 0 0 0 4215800 3247500 4804700 5353300 6895300 4057700 5909700 5690800 8578800 5167000 9330000 8671100 11764 2801 10727 99606;99607;99608;99609;99610;99611;99612;99613;99614;99615;99616;99617 79578;79579;79580;79581;79582 79579 5 EGSLVINSK Unmodified 945.51311 0.51311067 5231 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 29.083 29.204 2 0.011909 31476 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 62.104 24.377 104750000 0 0 0 10270000 7507600 9643300 0 10718000 0 0 0 23492000 18905000 24214000 0 11765 5231 10728 99618;99619;99620;99621;99622;99623;99624 79583 79583 1 EGSMIDANLK Unmodified 1076.5172 0.51720977 4471 Q9H9E3 COG4 Conserved oligomeric Golgi complex subunit 4 yes yes 0 0 0 By MS/MS 2 0 1 1 48.956 43.308 2 0.022313 56349 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 63.227 40.841 64748000 0 64748000 0 0 0 0 0 0 0 0 0 0 0 0 0 11766 4471 10729 99625 79584 79584 1 EGSPAPLEPEPGAAQPK Unmodified 1673.8261 0.82606496 2051 Q01167 FOXK2 Forkhead box protein K2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.345 46.511 2 2.0734E-13 52093 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 98.105 85.608 187600000 0 0 0 9262700 8410600 15140000 13888000 8427500 13853000 17666000 21325000 17284000 19067000 19190000 24081000 11767 2051 10730 99626;99627;99628;99629;99630;99631;99632;99633;99634;99635;99636;99637 79585;79586;79587;79588;79589;79590;79591;79592;79593;79594;79595;79596;79597 79591 13 EGSPIPHDPEFGSK Unmodified 1495.6943 0.69432251 2019 P85037 FOXK1 Forkhead box protein K1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 2 1 2 1 1 2 2 1 2 2 2 47.364 47.543 2;3 0.00039556 53402 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 65.219 60.328 438540000 0 0 0 23665000 32617000 33341000 39754000 22419000 23118000 40610000 52837000 41917000 34669000 29970000 63624000 11768 2019 10731 99638;99639;99640;99641;99642;99643;99644;99645;99646;99647;99648;99649;99650;99651;99652;99653;99654;99655;99656 79598;79599;79600;79601;79602;79603;79604;79605;79606;79607;79608;79609;79610;79611 79600 4 EGSPLEDLALLEALSEVVQNTENLK Unmodified 2710.3913 0.39127078 624 O95163 IKBKAP Elongator complex protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 2 2 2 2 105.4 100.35 3 0 125080 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 206.34 185.41 59588000 36156000 23432000 0 0 0 0 0 0 0 0 0 0 0 0 0 11769 624 10732 99657;99658;99659;99660 79612;79613;79614;79615 79612 4 EGSQGELTPANSQSR Unmodified 1559.7176 0.71757715 2232 Q13098 GPS1 COP9 signalosome complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 20.288 20.414 2 7.3641E-10 19932 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 122.69 96.018 24766000 0 0 0 0 1725100 0 3782900 3996500 0 0 0 0 0 0 15261000 11770 2232 10733 99661;99662;99663;99664 79616 79616 1 EGSRGEEDTGQEEGGSR Unmodified 1778.7303 0.73032668 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 6.0858 6.1917 3 5.0829E-10 3900 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.022 63.722 88893000 0 0 0 5694700 4835900 8663800 7153500 0 5202100 7232700 10598000 11185000 0 11503000 16825000 11771 3119 10734 99665;99666;99667;99668;99669;99670;99671;99672;99673;99674 79617;79618;79619;79620;79621 79617 5 EGSRGEEDTGQEEGGSRR Unmodified 1934.8314 0.83143771 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 2 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 1 2 2 2 5.6959 5.8152 3;4 9.3316E-21 3779 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 104.44 99.889 186850000 0 0 0 11381000 7377900 17936000 13146000 8487000 7385400 18217000 14139000 15449000 14093000 23795000 35447000 11772 3119 10735 99675;99676;99677;99678;99679;99680;99681;99682;99683;99684;99685;99686;99687;99688;99689;99690;99691;99692;99693;99694;99695;99696;99697 79622;79623;79624;79625;79626;79627;79628;79629 79628 7 EGSTAQLIINTEK Unmodified 1402.7304 0.73037367 128 O00203 AP3B1 AP-3 complex subunit beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.53 2.94 1 2 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 56.306 55.349 2 0.0013582 61638 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.883 55.186 530160000 439410 434990000 0 3691800 4849400 5948900 5882400 6826800 5297300 10682000 9605300 9204500 8574600 8922200 15249000 11773 128 10736 99698;99699;99700;99701;99702;99703;99704;99705;99706;99707;99708;99709;99710;99711;99712 79630;79631;79632;79633;79634;79635;79636;79637;79638;79639;79640;79641;79642 79634 13 EGSTQQLQTTSPK Unmodified 1403.6892 0.68923713 2786 Q5T8P6 RBM26 RNA-binding protein 26 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 19.658 19.82 2 4.173E-69 20153 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 236.69 210.65 486570000 0 0 0 0 51251000 56595000 60351000 55959000 54481000 72772000 56096000 0 0 0 79061000 11774 2786 10737 99713;99714;99715;99716;99717;99718;99719;99720;99721 79643;79644;79645;79646;79647;79648 79647 5 EGSVLDILK Unmodified 972.54916 0.54916182 1600 P49790 NUP153 Nuclear pore complex protein Nup153 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 80.522 80.043 2 0.0052698 92404 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 78.334 14.855 525430000 0 189130000 4648800 14855000 0 23670000 23456000 30275000 23210000 33750000 30621000 41594000 27890000 30657000 51670000 11775 1600 10738 99722;99723;99724;99725;99726;99727;99728;99729;99730;99731;99732;99733;99734 79649;79650;79651;79652;79653;79654;79655;79656;79657;79658;79659;79660 79656 12 EGSYIQRMK Unmodified 1110.5492 0.5491786 430 O60763 USO1 General vesicular transport factor p115 yes yes 0 0 1 By MS/MS By matching 2 0 2 1 1 30.132 25.097 2 0.012244 35044 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 118.07 90.234 40216000 37906000 2310600 0 0 0 0 0 0 0 0 0 0 0 0 0 11776 430 10739 99735;99736 79661 79661 1 EGTAPSENGETK Unmodified 1218.5364 0.53642488 2560 Q15651 HMGN3 High mobility group nucleosome-binding domain-containing protein 3 yes yes 0 0 0 By MS/MS By matching 1.67 0.471 1 2 2 1 40.381 39.883 2 3.4734E-05 92535 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 100.58 80.064 58427000 40026000 18401000 0 0 0 0 0 0 0 0 0 0 0 0 0 11777 2560 10740 99737;99738;99739 79662;79663 79662 2 EGTEAWEAAMK Unmodified 1221.5336 0.53358811 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 54.679 53.974 2 0.00057517 59960 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.755 67.702 400460000 0 276800000 0 7595800 6915200 6228700 8286100 10156000 0 12257000 14284000 14151000 9169500 11509000 23110000 11778 2392 10741 99740;99741;99742;99743;99744;99745;99746;99747;99748;99749;99750;99751;99752;99753 79664;79665;79666;79667;79668;79669;79670;79671;79672;79673;79674;79675;79676 79668 11 EGTEAWEAAMK Oxidation (M) 1237.5285 0.52850274 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 35.273 34.09 2 0.0026304 37964 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 62.558 49.521 83031000 0 62016000 742900 2974100 0 0 4488100 3893600 3003600 5913200 0 0 0 0 0 11779 2392 10741 99754;99755;99756;99757;99758;99759;99760 79677;79678;79679;79680;79681;79682 79678 3901 6 EGTGSTATSSSSTAGAAGK Unmodified 1626.7333 0.73328679 279 O15372 EIF3H Eukaryotic translation initiation factor 3 subunit H yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.88 3.69 2 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20.502 20.607 2;3 1.1217E-124 6751 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 194.12 179.92 714180000 69919000 96988000 1005600 27262000 16313000 17241000 22984000 24413000 25553000 39781000 121180000 81254000 46922000 46158000 77205000 11780 279 10742 99761;99762;99763;99764;99765;99766;99767;99768;99769;99770;99771;99772;99773;99774;99775;99776 79683;79684;79685;79686;79687;79688;79689;79690;79691;79692;79693;79694;79695;79696 79694 13 EGTLIEDSPDFR Unmodified 1377.6412 0.64122431 3134 Q86TC9 MYPN Myopalladin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.338 64.429 2 0.00029933 72910 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 97.456 74.103 306300000 0 0 0 13621000 14368000 24766000 22382000 20651000 18252000 26598000 27410000 34769000 26004000 26035000 51442000 11781 3134 10743 99777;99778;99779;99780;99781;99782;99783;99784;99785;99786;99787;99788 79697;79698;79699;79700;79701;79702;79703;79704;79705;79706;79707;79708 79700 10 EGTLTQVPLAPPPPGAPPSPAPAR Unmodified 2317.243 0.24303082 1546 P48634 PRRC2A Protein PRRC2A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 79.812 79.871 2;3 2.0619E-21 92330 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 64.768 61.927 283970000 0 0 0 15068000 20529000 14123000 21624000 19504000 17466000 27506000 30029000 34009000 20710000 26613000 36786000 11782 1546 10744 99789;99790;99791;99792;99793;99794;99795;99796;99797;99798;99799;99800;99801;99802;99803;99804;99805;99806;99807;99808;99809;99810;99811;99812 79709;79710;79711;79712;79713;79714;79715;79716;79717;79718;79719;79720;79721;79722 79710 14 EGTSAVENLNEMQCMWFQTECAQAYK 2 Oxidation (M) 3156.2933 0.29330613 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 2 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 79.728 79.88 3 1.653E-15 92341 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 64.954 63.229 24443000 0 0 0 0 0 0 0 0 0 6236600 9979100 8227100 0 0 0 11783 4226 10745 99813;99814;99815 79723;79724;79725 79723 5697;5698 3 EGTVGSVDGHMK Unmodified 1215.5554 0.55538619 4347 Q9H1D9 POLR3F DNA-directed RNA polymerase III subunit RPC6 yes yes 0 0 0 By MS/MS 2 0 1 1 23.078 19.053 2 0.0059833 25283 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.85 60.969 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11784 4347 10746 99816 79726 79726 1 EGVECEVINMR Oxidation (M) 1350.5908 0.59078542 937 P11177 PDHB Pyruvate dehydrogenase E1 component subunit beta, mitochondrial yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 47.175 41.964 2 0.0045556 54570 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.294 65.062 15344000 0 15344000 0 0 0 0 0 0 0 0 0 0 0 0 0 11785 937 10747 99817;99818 79727 79727 1221 1 EGVEEAAK Unmodified 831.39741 0.39741221 346 O43615 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 7.4484 7.4581 2 0.01524 5355 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 69.198 35.84 20481000 0 0 0 1806000 3375500 4687000 0 5952600 4659800 0 0 0 0 0 0 11786 346 10748 99819;99820;99821;99822;99823 79728;79729 79728 2 EGVEYRIK Unmodified 992.5291 0.52909508 1689 P52565 ARHGDIA Rho GDP-dissociation inhibitor 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 1.8 0.4 1 4 3 1 1 48.392 45.376 2 0.0018826 35279 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 176.41 103.62 1035400000 214000000 284520000 536850000 0 0 0 0 0 0 0 0 0 0 0 0 11787 1689 10749 99824;99825;99826;99827;99828 79730;79731;79732;79733;79734;79735;79736 79734 7 EGVHGGLINK Unmodified 1022.5509 0.55089316 846 P07737 PFN1 Profilin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 6.24 3.96 1 7 2 11 6 3 1 1 1 1 1 1 1 1 1 1 1 1 27.716 26.235 2 2.3251E-49 29033 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 219.7 156.98 6752800000 447730000 2951700000 2462400000 14135000 8505300 20153000 17202000 13761000 10720000 32780000 148600000 126960000 40251000 0 457840000 11788 846 10750 99829;99830;99831;99832;99833;99834;99835;99836;99837;99838;99839;99840;99841;99842;99843;99844;99845;99846;99847;99848;99849 79737;79738;79739;79740;79741;79742;79743;79744;79745;79746;79747;79748;79749;79750;79751;79752;79753;79754;79755;79756;79757;79758;79759;79760;79761;79762;79763;79764;79765;79766;79767 79741 29 EGVHGGLINKK Unmodified 1150.6459 0.64585618 846 P07737 PFN1 Profilin-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.86 3.47 6 2 21 4 2 2 1 2 1 2 2 1 2 2 2 2 2 2 14.734 13.841 2;3 5.2948E-35 21737 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 200.54 125.33 2780800000 2048500000 39009000 135620000 17138000 10583000 4033700 23643000 16327000 5014800 18718000 91420000 73183000 21840000 61924000 213820000 11789 846 10751 99850;99851;99852;99853;99854;99855;99856;99857;99858;99859;99860;99861;99862;99863;99864;99865;99866;99867;99868;99869;99870;99871;99872;99873;99874;99875;99876;99877;99878 79768;79769;79770;79771;79772;79773;79774;79775;79776;79777;79778;79779;79780;79781;79782;79783;79784;79785;79786;79787;79788 79774 15 EGVIEPDTDAPQEMGDENAEITEEMMDQANDK Unmodified 3550.4546 0.45455361 1625 P50502 ST13 Hsc70-interacting protein yes yes 0 0 0 By MS/MS 1.5 0.5 1 1 2 96.668 95.234 3 4.2393E-45 92445 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 96.707 94.802 32724000 32724000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11790 1625 10752 99879;99880 79789;79790 79789 2 EGVIEPDTDAPQEMGDENAEITEEMMDQANDKK Unmodified 3678.5495 0.54951663 1625 P50502 ST13 Hsc70-interacting protein yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 84.386 79.011 3 1.4858E-166 99450 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 158.97 157.25 107010000 26503000 80508000 0 0 0 0 0 0 0 0 0 0 0 0 0 11791 1625 10753 99881;99882;99883 79791;79792;79793;79794 79791 4 EGVILTNESAASTGQPDNDVTEGQR Unmodified 2587.1998 0.19978162 2168 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 1 2 2 2 2 2 2 2 57.863 57.976 2;3 1.8663E-155 65735 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 189.19 185.53 660910000 0 0 0 40906000 39502000 74095000 40658000 26721000 37682000 50995000 53415000 100270000 52615000 63131000 80922000 11792 2168 10754 99884;99885;99886;99887;99888;99889;99890;99891;99892;99893;99894;99895;99896;99897;99898;99899;99900;99901;99902;99903;99904;99905;99906 79795;79796;79797;79798;79799;79800;79801;79802;79803;79804;79805;79806;79807;79808;79809;79810;79811;79812;79813;79814;79815;79816;79817;79818 79813 24 EGVKFDESEK Unmodified 1166.5455 0.54553301 1002 P14625 HSP90B1 Endoplasmin yes yes 0 0 1 By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 22.032 22.268 3 0.022975 23204 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 33.89 22.535 98906000 0 0 0 5116300 2962500 0 7855200 3212500 0 8819000 13501000 28022000 9800800 8613000 11004000 11793 1002 10755 99907;99908;99909;99910;99911;99912;99913;99914;99915;99916 79819 79819 1 EGVLPLTAASTAPISFGFTR Unmodified 2034.0786 0.078591257 3686 Q92917 GPKOW G patch domain and KOW motifs-containing protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 94.762 94.899 2 4.1612E-09 110403 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 91.743 79.183 29945000 0 0 0 0 0 1120400 0 1607100 1249900 6764300 3176800 1961600 0 0 14065000 11794 3686 10756 99917;99918;99919;99920;99921;99922;99923 79820;79821;79822;79823;79824;79825;79826;79827 79822 8 EGVLTGSPEQK Unmodified 1143.5772 0.57716749 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.691 26.891 2 6.6884E-06 29047 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 140.88 106.63 428490000 0 0 0 20124000 27356000 44312000 30708000 25723000 25237000 40155000 39102000 60055000 36467000 33299000 45952000 11795 3641 10757 99924;99925;99926;99927;99928;99929;99930;99931;99932;99933;99934;99935 79828;79829;79830;79831;79832;79833;79834;79835;79836;79837;79838;79839 79828 12 EGVLTGSPEQKEEAAK Unmodified 1671.8315 0.83154427 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 28.057 28.206 3 0.0025733 29870 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 53.169 36.742 31353000 0 0 0 5438400 0 0 6809200 0 0 4363500 0 14742000 0 0 0 11796 3641 10758 99936;99937;99938;99939 79840;79841;79842 79841 1 EGVMYVGAK Oxidation (M) 968.46372 0.46371763 574 O76070 SNCG Gamma-synuclein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26.064 25.336 2 0.00481 27798 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 72.789 47.866 1636000000 43436000 669840000 13520000 62536000 0 66516000 106770000 72991000 54588000 62641000 95414000 105170000 85174000 80541000 116840000 11797 574 10759 99940;99941;99942;99943;99944;99945;99946;99947;99948;99949;99950;99951;99952;99953 79843;79844;79845;79846;79847;79848;79849;79850;79851;79852;79853;79854;79855;79856;79857;79858;79859 79844 730 16 EGVMYVGAK Unmodified 952.4688 0.46880301 574 O76070 SNCG Gamma-synuclein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 37.162 36.968 2 0.0041519 39406 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.754 50.661 1793100000 0 26072000 0 46947000 92509000 44239000 99642000 81110000 70301000 121550000 168720000 224510000 136430000 134950000 546140000 11798 574 10759 99954;99955;99956;99957;99958;99959;99960;99961;99962;99963;99964;99965;99966 79860;79861;79862;79863;79864;79865;79866;79867;79868;79869;79870;79871 79863 12 EGVPQPSGPPAR Unmodified 1190.6044 0.60438529 855 P07992 ERCC1 DNA excision repair protein ERCC-1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 32.281 32.48 2 0.040376 35294 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 34.803 16.894 43319000 0 0 0 2891000 2673300 3098600 0 5612100 2615300 4366700 4148000 4524500 4602100 3704400 5083300 11799 855 10760 99967;99968;99969;99970;99971;99972;99973;99974;99975;99976;99977 79872 79872 1 EGVQGPLNVSLSEEGK Unmodified 1641.821 0.82097959 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 69.272 68.62 2 1.1873E-59 78139 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 204.48 187.46 1447200000 0 808260000 0 28135000 29513000 46714000 42884000 27323000 36160000 45495000 68532000 75792000 57394000 72555000 108440000 11800 965 10761 99978;99979;99980;99981;99982;99983;99984;99985;99986;99987;99988;99989;99990;99991 79873;79874;79875;79876;79877;79878;79879;79880;79881;79882;79883;79884;79885;79886;79887 79877 15 EGVQWEAK Unmodified 945.4556 0.45559579 2201 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 32.055 32.248 2 0.026049 35442 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 58.194 35.265 35398000 0 0 0 0 2659100 3360600 2637500 0 3865000 3547300 4170800 0 4321500 4801700 6034100 11801 2201 10762 99992;99993;99994;99995;99996;99997;99998;99999;100000 79888 79888 1 EGVSAAFAVK Unmodified 977.5182 0.51819605 3043 Q7L1Q6 BZW1 Basic leucine zipper and W2 domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.8 4 1 8 1 3 1 1 1 1 1 1 1 1 1 52.993 51.038 2 0.0027014 63461 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 101.72 71.109 2423500000 35789000 1995100000 25241000 0 28648000 0 28940000 37250000 0 67128000 66129000 0 52477000 0 86773000 11802 3043 10763 100001;100002;100003;100004;100005;100006;100007;100008;100009;100010;100011;100012;100013 79889;79890;79891;79892;79893;79894;79895;79896;79897;79898;79899;79900;79901;79902;79903;79904 79901 15 EGVVAAAEK Unmodified 872.46035 0.46034682 1393 P37840 SNCA Alpha-synuclein no no 0 0 0 By MS/MS By MS/MS By MS/MS 7.67 3.3 1 2 1 1 1 17.176 16.045 2 0.031803 16007 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 47.603 13.75 30664000 0 3155500 0 0 0 0 0 12936000 0 14572000 0 0 0 0 0 11803 1393 10764 100014;100015;100016 79905;79906 79905 2 EGVVECSFVK Unmodified 1152.5485 0.5485099 1423 P40926 MDH2 Malate dehydrogenase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 56.018 49.727 2 0.0071364 67345 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.233 72.294 454280000 17605000 436670000 0 0 0 0 0 0 0 0 0 0 0 0 0 11804 1423 10765 100017;100018;100019 79907;79908 79908 1 EGVVGAVEK Unmodified 886.476 0.47599688 574 O76070 SNCG Gamma-synuclein yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 25.273 25.131 2 0.0039854 25588 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 97.635 57.532 3542600000 0 81064000 0 9395200 242370000 195280000 262390000 165640000 163550000 243700000 330520000 389810000 314700000 357670000 786500000 11805 574 10766 100020;100021;100022;100023;100024;100025;100026;100027;100028;100029;100030;100031;100032 79909;79910;79911;79912;79913;79914;79915;79916;79917;79918;79919 79912 6 EGVVGPELHHK Unmodified 1200.6251 0.62512073 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS 2 0 1 1 24.879 21.918 3 0.041747 27772 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 28.806 2.763 10356000 0 0 10356000 0 0 0 0 0 0 0 0 0 0 0 0 11806 2501 10767 100033 79920 79920 1 EGVVHGVATVAEK Unmodified 1294.6881 0.68811492 1393 P37840 SNCA Alpha-synuclein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.03 3.41 7 1 24 2 3 3 2 2 2 2 2 2 2 2 2 2 2 2 35.039 33.974 2;3 1.3801E-139 46035 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 246.08 201.33 919440000 17541000 344410000 63056000 33800000 34284000 26223000 28647000 26944000 16454000 42064000 65931000 63419000 45332000 39479000 71856000 11807 1393 10768 100034;100035;100036;100037;100038;100039;100040;100041;100042;100043;100044;100045;100046;100047;100048;100049;100050;100051;100052;100053;100054;100055;100056;100057;100058;100059;100060;100061;100062;100063;100064;100065 79921;79922;79923;79924;79925;79926;79927;79928;79929;79930;79931;79932;79933;79934;79935;79936;79937;79938;79939;79940;79941;79942 79925 18 EGWAPASYIDK Unmodified 1235.5823 0.58225287 2795 Q5TCZ1 SH3PXD2A SH3 and PX domain-containing protein 2A yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 67.739 67.718 2 0.02637 77705 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 45.307 28.076 34620000 0 0 0 6501900 3036500 3214400 3057700 4965900 0 0 7778500 6065000 0 0 0 11808 2795 10769 100066;100067;100068;100069;100070;100071;100072 79943 79943 1 EGWAPATFIDK Unmodified 1233.603 0.60298831 10 A1X283 SH3PXD2B SH3 and PX domain-containing protein 2B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 78.672 77.766 2 0.0056307 96250 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.149 71.887 135320000 0 95682000 0 2745100 4176900 7133400 5102500 0 5761900 8561900 6152700 0 0 0 0 11809 10 10770 100073;100074;100075;100076;100077;100078;100079;100080;100081;100082 79944;79945;79946;79947;79948 79944 5 EGYAWAEDK Unmodified 1067.456 0.45598972 5168 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog yes yes 0 0 0 By MS/MS 10 0 1 1 40.29 39.804 2 0.0353 44576 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 46.158 29.618 6038900 0 0 0 0 6038900 0 0 0 0 0 0 0 0 0 0 11810 5168 10771 100083 79949 79949 1 EGYDFHSSSEFEIVK Unmodified 1772.7893 0.78934511 1837 P61163 ACTR1A Alpha-centractin yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 76.606 72.795 3 0.018757 91194 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 41.743 37.478 61268000 0 57645000 3623200 0 0 0 0 0 0 0 0 0 0 0 0 11811 1837 10772 100084;100085 79950 79950 0 EGYENFFDK Unmodified 1147.4822 0.48220447 4334 Q9H0P0 NT5C3A Cytosolic 5'-nucleotidase 3A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65.941 65.335 2 0.016625 74858 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 56.378 44.742 168810000 0 68236000 1565200 9735000 5192400 7807100 7192700 8153500 4899600 7422800 8985400 8455100 10844000 7363700 12954000 11812 4334 10773 100086;100087;100088;100089;100090;100091;100092;100093;100094;100095;100096;100097;100098;100099 79951;79952;79953;79954;79955;79956;79957;79958;79959;79960;79961 79952 11 EGYIERK Unmodified 893.46068 0.46068117 4871 Q9UEE9 CFDP1 Craniofacial development protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 12.092 8.9684 2 0.045221 11339 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 127.31 77 37101000 7720800 0 29380000 0 0 0 0 0 0 0 0 0 0 0 0 11813 4871 10774 100100;100101 79962 79962 1 EGYNNPPISGENLIGLSR Unmodified 1928.9592 0.9592044 5244 Q9Y5Q8 GTF3C5 General transcription factor 3C polypeptide 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.294 80.352 2 7.8976E-20 92903 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 121.45 99.818 268120000 0 0 0 7785400 18139000 26396000 13466000 14574000 15909000 25628000 26767000 27583000 22716000 26120000 43038000 11814 5244 10775 100102;100103;100104;100105;100106;100107;100108;100109;100110;100111;100112;100113 79963;79964;79965;79966;79967;79968;79969;79970;79971;79972;79973 79964 11 EGYSGVGLLSR Unmodified 1136.5826 0.58258722 1222 P27695 APEX1 DNA-(apurinic or apyrimidinic site) lyase;DNA-(apurinic or apyrimidinic site) lyase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.08 3.33 2 1 9 2 1 1 1 1 1 1 1 1 1 1 61.98 60.858 2 4.9976E-16 68646 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 163.88 100.46 208360000 0 67977000 5952400 4074500 2618100 0 2470900 3875200 0 0 18966000 16194000 3970700 14398000 67859000 11815 1222 10776 100114;100115;100116;100117;100118;100119;100120;100121;100122;100123;100124;100125 79974;79975;79976;79977;79978;79979;79980;79981 79975 7 EGYSGVGLLSRQCPLK Unmodified 1762.9036 0.90360378 1222 P27695 APEX1 DNA-(apurinic or apyrimidinic site) lyase;DNA-(apurinic or apyrimidinic site) lyase, mitochondrial yes yes 0 0 1 By MS/MS 2 0 2 2 76.417 68.286 2;3 0.00052326 89938 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.416 56.782 72081000 72081000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11816 1222 10777 100126;100127 79982;79983 79982 2 EGYVPQEEVPVYENK Unmodified 1778.8363 0.8362953 4112 Q9BRP8 WIBG Partner of Y14 and mago yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 6.25 3.77 1 1 2 2 1 1 65.845 63.398 2 9.1159E-15 73590 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 103.43 88.061 86693000 0 71332000 0 0 0 0 0 0 0 0 6883000 8478200 0 0 0 11817 4112 10778 100128;100129;100130;100131 79984;79985;79986;79987;79988 79987 5 EGYYGYTGAFR Unmodified 1282.5619 0.56185177 763 P02787 TF Serotransferrin yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 61.998 61.74 2 0.021312 70348 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 42.348 27.088 16206000 0 0 0 3379500 0 0 0 12827000 0 0 0 0 0 0 0 11818 763 10779 100132;100133 79989 79989 1 EHAASLCRCYEEK Unmodified 1651.7083 0.70827479 4320 Q9H0A8 COMMD4 COMM domain-containing protein 4 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 24.864 20.794 3 0.0060392 30118 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 59.592 48.646 34833000 29271000 0 5562000 0 0 0 0 0 0 0 0 0 0 0 0 11819 4320 10780 100134;100135 79990;79991 79990 1 EHALLAYTLGVK Unmodified 1313.7343 0.73433683 1960 P68104;Q5VTE0;Q05639 EEF1A1;EEF1A1P5;EEF1A2 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.72 1.47 13 356 5 4 4 13 14 37 24 39 34 32 30 26 24 39 44 90.566 90.619 2;3 5.2513E-165 84806 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 247.08 228.77 8805900000 36941000 7233300 2380700 136590000 224110000 781840000 408020000 643200000 603360000 845390000 748460000 721150000 678190000 801620000 2167500000 11820 1960 10781 100136;100137;100138;100139;100140;100141;100142;100143;100144;100145;100146;100147;100148;100149;100150;100151;100152;100153;100154;100155;100156;100157;100158;100159;100160;100161;100162;100163;100164;100165;100166;100167;100168;100169;100170;100171;100172;100173;100174;100175;100176;100177;100178;100179;100180;100181;100182;100183;100184;100185;100186;100187;100188;100189;100190;100191;100192;100193;100194;100195;100196;100197;100198;100199;100200;100201;100202;100203;100204;100205;100206;100207;100208;100209;100210;100211;100212;100213;100214;100215;100216;100217;100218;100219;100220;100221;100222;100223;100224;100225;100226;100227;100228;100229;100230;100231;100232;100233;100234;100235;100236;100237;100238;100239;100240;100241;100242;100243;100244;100245;100246;100247;100248;100249;100250;100251;100252;100253;100254;100255;100256;100257;100258;100259;100260;100261;100262;100263;100264;100265;100266;100267;100268;100269;100270;100271;100272;100273;100274;100275;100276;100277;100278;100279;100280;100281;100282;100283;100284;100285;100286;100287;100288;100289;100290;100291;100292;100293;100294;100295;100296;100297;100298;100299;100300;100301;100302;100303;100304;100305;100306;100307;100308;100309;100310;100311;100312;100313;100314;100315;100316;100317;100318;100319;100320;100321;100322;100323;100324;100325;100326;100327;100328;100329;100330;100331;100332;100333;100334;100335;100336;100337;100338;100339;100340;100341;100342;100343;100344;100345;100346;100347;100348;100349;100350;100351;100352;100353;100354;100355;100356;100357;100358;100359;100360;100361;100362;100363;100364;100365;100366;100367;100368;100369;100370;100371;100372;100373;100374;100375;100376;100377;100378;100379;100380;100381;100382;100383;100384;100385;100386;100387;100388;100389;100390;100391;100392;100393;100394;100395;100396;100397;100398;100399;100400;100401;100402;100403;100404;100405;100406;100407;100408;100409;100410;100411;100412;100413;100414;100415;100416;100417;100418;100419;100420;100421;100422;100423;100424;100425;100426;100427;100428;100429;100430;100431;100432;100433;100434;100435;100436;100437;100438;100439;100440;100441;100442;100443;100444;100445;100446;100447;100448;100449;100450;100451;100452;100453;100454;100455;100456;100457;100458;100459;100460;100461;100462;100463;100464;100465;100466;100467;100468;100469;100470;100471;100472;100473;100474;100475;100476;100477;100478;100479;100480;100481;100482;100483;100484;100485;100486;100487;100488;100489;100490;100491;100492;100493;100494;100495;100496;100497;100498;100499;100500;100501;100502;100503;100504 79992;79993;79994;79995;79996;79997;79998;79999;80000;80001;80002;80003;80004;80005;80006;80007;80008;80009;80010;80011;80012;80013;80014;80015;80016;80017;80018;80019;80020;80021;80022;80023;80024;80025;80026;80027;80028;80029;80030;80031;80032;80033;80034;80035;80036;80037;80038;80039;80040;80041;80042;80043;80044;80045;80046;80047;80048;80049;80050;80051;80052;80053;80054;80055;80056;80057;80058;80059;80060;80061;80062;80063;80064;80065;80066;80067;80068;80069;80070;80071;80072;80073;80074;80075;80076;80077;80078;80079;80080;80081;80082;80083;80084;80085;80086;80087;80088;80089;80090;80091;80092;80093;80094;80095;80096;80097;80098;80099;80100;80101;80102;80103;80104;80105;80106;80107;80108;80109;80110;80111;80112;80113;80114;80115;80116;80117;80118;80119;80120;80121;80122;80123;80124;80125;80126;80127;80128;80129;80130;80131;80132;80133;80134;80135;80136;80137;80138;80139;80140;80141;80142;80143;80144;80145;80146;80147;80148;80149;80150;80151;80152;80153;80154;80155;80156;80157;80158;80159;80160;80161;80162;80163;80164;80165;80166;80167;80168;80169;80170;80171;80172;80173;80174;80175;80176;80177;80178;80179;80180;80181;80182;80183;80184;80185;80186;80187;80188;80189;80190;80191;80192;80193;80194;80195;80196;80197;80198;80199;80200;80201;80202;80203;80204;80205;80206;80207;80208;80209;80210;80211;80212;80213;80214;80215;80216;80217;80218;80219;80220;80221;80222;80223;80224;80225;80226;80227;80228;80229;80230;80231;80232;80233;80234;80235;80236;80237;80238;80239;80240;80241;80242;80243;80244;80245;80246;80247;80248;80249;80250;80251;80252;80253;80254;80255;80256;80257;80258;80259;80260;80261;80262;80263;80264;80265;80266;80267;80268;80269;80270;80271;80272;80273;80274;80275;80276;80277;80278;80279;80280;80281;80282;80283;80284;80285;80286;80287;80288;80289;80290;80291;80292;80293;80294;80295;80296;80297;80298;80299;80300;80301;80302;80303;80304;80305;80306;80307;80308 80273 291 EHALTSGTIK Unmodified 1055.5611 0.56112349 2522 Q15369 TCEB1 Transcription elongation factor B polypeptide 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 17.859 18.402 2 0.0052778 18334 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 69.598 42.461 6803000 0 0 0 0 0 0 0 0 0 0 1368100 3225000 0 0 2209900 11821 2522 10782 100505;100506;100507;100508 80309;80310;80311;80312 80311 4 EHAMLAK Unmodified 798.40581 0.40580882 1014 P15170;Q8IYD1 GSPT1;GSPT2 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A;Eukaryotic peptide chain release factor GTP-binding subunit ERF3B yes no 0 0 0 By MS/MS 2 0 1 1 11.047 8.7946 2 0.010502 11318 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 144.29 112.18 6579400 0 0 6579400 0 0 0 0 0 0 0 0 0 0 0 0 11822 1014 10783 100509 80313 80313 1 EHAPIRSSLNSQQPTEEK Unmodified 2050.0079 0.0079455095 522 O75592 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 yes yes 0 0 1 By MS/MS 2 0 1 1 33.33 27.293 3 0.0197 38181 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 41.695 26.773 6260600 6260600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11823 522 10784 100510 80314 80314 0 EHAPLASPVENK Unmodified 1290.6568 0.65681479 4997 Q9ULJ3 ZBTB21 Zinc finger and BTB domain-containing protein 21 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 28.319 28.517 3 0.00038757 30193 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 54.823 48.124 139100000 0 0 0 8018400 8447100 9036600 7519800 0 5513900 15040000 17897000 21846000 17503000 11287000 16995000 11824 4997 10785 100511;100512;100513;100514;100515;100516;100517;100518;100519;100520;100521 80315;80316;80317;80318;80319;80320 80320 5 EHASCGQTGVENMQNTQAMELAGAAPEK Unmodified 2958.2906 0.29060401 4641 Q9NU22 MDN1 Midasin yes yes 0 0 0 By MS/MS 2 0 1 1 68.46 62.56 3 3.9633E-78 79892 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.49 122.05 24229000 0 24229000 0 0 0 0 0 0 0 0 0 0 0 0 0 11825 4641 10786 100522 80321 80321 1 EHASGSGAQSEAAGR Unmodified 1413.6233 0.62328283 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 5.6765 5.7937 3 0.0025944 3767 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 43.813 29.849 22288000 0 0 0 0 2572100 3598100 3139800 3136600 3080900 2809600 2015000 0 0 1935700 0 11826 2459 10787 100523;100524;100525;100526;100527;100528;100529;100530 80322 80322 1 EHASGSGAQSEAAGRTEPTGPK Unmodified 2123.9832 0.98318732 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.32 3.26 4 15 1 1 2 1 1 2 1 1 2 1 2 1 1 1 1 13.864 13.35 3;4 2.8441E-26 12314 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.957 87.165 181820000 6311500 6664600 69181000 3475300 3916200 14030000 5486600 4216700 9061600 8053000 13420000 10617000 8591500 6065800 12730000 11827 2459 10788 100531;100532;100533;100534;100535;100536;100537;100538;100539;100540;100541;100542;100543;100544;100545;100546;100547;100548;100549 80323;80324;80325;80326;80327;80328;80329;80330;80331;80332;80333;80334;80335;80336;80337;80338;80339;80340;80341 80327 17 EHASSLASSGLK Unmodified 1185.599 0.59896556 3217 Q8IUD2 ERC1 ELKS/Rab6-interacting/CAST family member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 6.07 3.94 6 1 7 2 3 2 1 1 1 1 1 1 1 23.269 21.79 2;3 0.0001454 29713 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.9 95.296 198000000 12801000 66977000 82884000 0 2692700 0 0 0 5062900 4885500 4742000 4894700 0 4340800 8717400 11828 3217 10789 100550;100551;100552;100553;100554;100555;100556;100557;100558;100559;100560;100561;100562;100563 80342;80343;80344;80345;80346;80347;80348;80349;80350;80351;80352 80342 7 EHCEEYGR Unmodified 1078.4138 0.41380733 5168 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog yes yes 0 0 0 By MS/MS By matching 2.33 0.471 2 1 2 1 6.9016 3.9619 2 0.01206 5919 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.32 98.977 14624000 0 13162000 1461800 0 0 0 0 0 0 0 0 0 0 0 0 11829 5168 10790 100564;100565;100566 80353;80354 80353 2 EHCEEYGRMLQADPNK Unmodified 1975.8516 0.85164456 5168 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 45.205 39.605 3 0.00025782 54899 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.328 52.569 37133000 13618000 0 23515000 0 0 0 0 0 0 0 0 0 0 0 0 11830 5168 10791 100567;100568 80355;80356;80357;80358 80355 4 EHCEEYGRMLQADPNK Oxidation (M) 1991.8466 0.84655919 5168 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog yes yes 0 1 1 By MS/MS By MS/MS 2 0 4 2 2 29.508 25.096 3;4 0.0003201 32019 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 71.513 69.951 70067000 15567000 0 54499000 0 0 0 0 0 0 0 0 0 0 0 0 11831 5168 10791 100569;100570;100571;100572 80359;80360;80361 80361 6540 2 EHCLNEFNFPDPYSK Unmodified 1895.8148 0.81484835 4666 Q9NVE7 PANK4 Pantothenate kinase 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 76.828 76.55 3 3.1885E-07 88265 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 87.647 84.67 33243000 0 0 0 4336200 6679600 22228000 0 0 0 0 0 0 0 0 0 11832 4666 10792 100573;100574;100575 80362;80363 80362 2 EHCLVGVK Unmodified 940.48004 0.4800364 3141 Q86U44 METTL3 N6-adenosine-methyltransferase 70 kDa subunit yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 24.644 20.575 2 0.01195 29005 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.67 74.744 31853000 17641000 0 14212000 0 0 0 0 0 0 0 0 0 0 0 0 11833 3141 10793 100576;100577 80364;80365;80366 80365 3 EHCPAGQPVK Unmodified 1121.5288 0.52877751 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 7.301 7.4004 2 0.001715 5813 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 89.142 59.804 50557000 0 0 0 2185600 2419900 4911800 2842800 2808300 3090100 0 0 6215000 7208800 6734900 12139000 11834 2930 10794 100578;100579;100580;100581;100582;100583;100584;100585;100586;100587 80367;80368;80369;80370 80368 3 EHCYNQVPVELSTEK Unmodified 1831.8411 0.8410631 2388 Q14191 WRN Werner syndrome ATP-dependent helicase yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 58.479 53.139 3 0.029513 68450 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 30.575 10.897 20633000 0 20633000 0 0 0 0 0 0 0 0 0 0 0 0 0 11835 2388 10795 100588;100589 80371 80371 1 EHDGEFTGEDESSAHALERK Unmodified 2242.9727 0.97268222 4925 Q9UIF8 BAZ2B Bromodomain adjacent to zinc finger domain protein 2B yes yes 0 0 1 By MS/MS 2 0 1 1 35.638 32.253 3 0.038536 40581 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 12.714 10.501 9488500 0 0 9488500 0 0 0 0 0 0 0 0 0 0 0 0 11836 4925 10796 100590 80372 80372 1 EHDILSQLQK Unmodified 1209.6354 0.63535107 3266 Q8IXQ6 PARP9 Poly [ADP-ribose] polymerase 9 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 58.576 53.742 3 0.0035794 67194 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 55.235 41.643 18043000 0 13461000 4582100 0 0 0 0 0 0 0 0 0 0 0 0 11837 3266 10797 100591;100592 80373;80374 80374 2 EHDPVGQMVNNPK Unmodified 1463.6827 0.68271197 1754 P55060 CSE1L Exportin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.8 3.94 7 1 7 3 3 2 1 1 1 1 1 1 1 34.733 32.613 2;3 1.3832E-25 35043 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 124.6 115.71 1828300000 52343000 1267700000 69148000 0 0 88873000 0 40079000 0 61754000 53211000 40427000 0 63634000 91110000 11838 1754 10798 100593;100594;100595;100596;100597;100598;100599;100600;100601;100602;100603;100604;100605;100606;100607 80375;80376;80377;80378;80379;80380;80381;80382;80383;80384;80385;80386;80387;80388;80389;80390 80390 13 EHDPVGQMVNNPK Oxidation (M) 1479.6776 0.67762659 1754 P55060 CSE1L Exportin-2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.24 3.75 5 1 11 1 3 2 1 1 1 1 1 2 1 1 2 18.502 17.42 2;3 5.3754E-07 22648 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.25 100.37 1413500000 15560000 1124100000 68545000 0 15775000 9871400 22161000 13925000 0 0 21073000 38732000 22258000 26649000 34888000 11839 1754 10798 100608;100609;100610;100611;100612;100613;100614;100615;100616;100617;100618;100619;100620;100621;100622;100623;100624 80391;80392;80393;80394;80395;80396;80397;80398;80399;80400;80401;80402;80403;80404;80405;80406 80394 2859 8 EHDQLIEK Unmodified 1010.5033 0.50327426 237 O14980 XPO1 Exportin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.78 3.6 1 3 1 13 2 2 1 1 1 1 1 1 1 1 1 1 1 1 2 20.824 20.467 2 2.2688E-26 14899 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 180.44 89.781 715380000 39695000 448500000 47854000 7961000 7290400 16829000 11398000 8160000 6360200 17291000 18479000 12964000 13995000 22081000 36525000 11840 237 10799 100625;100626;100627;100628;100629;100630;100631;100632;100633;100634;100635;100636;100637;100638;100639;100640;100641;100642 80407;80408;80409;80410;80411;80412;80413;80414;80415;80416;80417;80418;80419;80420;80421;80422;80423;80424 80408 17 EHEADTANMSDK Unmodified 1346.5409 0.54085834 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 2 2 24 1 3 2 2 2 2 2 2 2 2 2 2 2 2 7.624 7.2426 2;3 1.6721E-14 5504 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 131.83 120.29 2895300000 5097700 188230000 0 4095400 4282600 6069200 105680000 165020000 133420000 365730000 1259800000 640620000 3388800 3602000 10270000 11841 4226 10800 100643;100644;100645;100646;100647;100648;100649;100650;100651;100652;100653;100654;100655;100656;100657;100658;100659;100660;100661;100662;100663;100664;100665;100666;100667;100668;100669;100670 80425;80426;80427;80428;80429;80430;80431;80432;80433;80434;80435;80436;80437;80438;80439;80440 80434 12 EHEADTANMSDK Oxidation (M) 1362.5358 0.53577296 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 7.5 3.55 1 1 4 2 1 1 1 1 5.5844 4.6054 3 3.1111E-06 3292 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 108.35 102.12 143730000 0 17189000 0 0 0 0 20364000 0 0 0 47114000 57712000 0 0 1349600 11842 4226 10800 100671;100672;100673;100674;100675;100676 80441;80442;80443 80441 5699 2 EHEAEINK Unmodified 968.45632 0.45632407 3242 Q8IWJ2 GCC2 GRIP and coiled-coil domain-containing protein 2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 6.9241 3.5656 2 2.5736E-20 5580 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 174.73 41.025 3688500 0 3688500 0 0 0 0 0 0 0 0 0 0 0 0 0 11843 3242 10801 100677;100678 80444;80445 80444 2 EHEAITK Unmodified 826.41848 0.418482 4440 Q9H7Z6 KAT8 Histone acetyltransferase KAT8 yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 4.8896 2.1755 2 0.012924 4496 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 151.29 121.92 103610000 0 102920000 692290 0 0 0 0 0 0 0 0 0 0 0 0 11844 4440 10802 100679;100680 80446;80447 80447 2 EHECNIDEVK Unmodified 1271.5452 0.54521543 820 P06400 RB1 Retinoblastoma-associated protein yes yes 0 0 0 By MS/MS 3 0 1 1 20.67 16.843 3 0.051479 20957 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 28.956 16.38 2843000 0 2843000 0 0 0 0 0 0 0 0 0 0 0 0 0 11845 820 10803 100681 80448 80448 1 EHEEAVSVDR Unmodified 1169.5313 0.53127993 2237 Q13126 MTAP S-methyl-5'-thioadenosine phosphorylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.5 1.8 1 13 1 1 1 1 1 1 1 2 1 1 2 1 14.461 14.406 2;3 0.0025284 13159 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.533 61.577 133910000 0 2676600 0 6029900 0 4675800 2994300 4995400 2213700 6495300 32527000 14096000 3705700 18794000 34708000 11846 2237 10804 100682;100683;100684;100685;100686;100687;100688;100689;100690;100691;100692;100693;100694;100695 80449;80450;80451;80452;80453;80454;80455 80449 4 EHEEAVSVDRVLK Unmodified 1509.7787 0.77872084 2237 Q13126 MTAP S-methyl-5'-thioadenosine phosphorylase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0.535 1 5 1 3 2 2 49.539 43.826 2;3 7.6925E-75 55080 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 215.87 192.02 295660000 98635000 17280000 179740000 0 0 0 0 0 0 0 0 0 0 0 0 11847 2237 10805 100696;100697;100698;100699;100700;100701;100702 80456;80457;80458;80459;80460;80461;80462;80463;80464;80465 80464 9 EHEEGRDSEEGPR Unmodified 1525.6393 0.63932683 3102 Q7Z4V5 HDGFRP2 Hepatoma-derived growth factor-related protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 5.7 5.8177 3 4.8674E-09 3755 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 111.79 103.88 118840000 0 0 0 12111000 6299500 7744800 12157000 0 11423000 9472500 13548000 0 11443000 12960000 21685000 11848 3102 10806 100703;100704;100705;100706;100707;100708;100709;100710;100711;100712;100713 80466;80467;80468;80469;80470;80471;80472;80473;80474;80475;80476;80477 80475 12 EHEIEVIDQR Unmodified 1266.6204 0.62042929 5000 Q9ULM3 YEATS2 YEATS domain-containing protein 2 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 2 1 1 1 1 1 1 1 1 36.06 36.121 2;3 0.0027595 39848 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 57.267 45.632 64968000 0 0 0 5705200 9044300 6181700 3797600 3046500 2904200 10060000 8758100 11760000 3710600 0 0 11849 5000 10807 100714;100715;100716;100717;100718;100719;100720;100721;100722;100723;100724 80478;80479;80480;80481;80482;80483;80484;80485;80486 80480 7 EHELLEQQK Unmodified 1152.5775 0.57750184 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.38 3.18 5 1 23 2 3 1 2 2 2 2 2 2 1 2 2 2 2 2 18.562 17.87 2;3 1.1355E-21 16485 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 220.51 173.52 2152400000 118450000 612690000 131250000 68089000 73859000 77584000 93201000 78678000 60296000 79763000 117180000 209810000 146730000 104270000 180580000 11850 2290 10808 100725;100726;100727;100728;100729;100730;100731;100732;100733;100734;100735;100736;100737;100738;100739;100740;100741;100742;100743;100744;100745;100746;100747;100748;100749;100750;100751;100752;100753 80487;80488;80489;80490;80491;80492;80493;80494;80495;80496;80497;80498;80499;80500;80501;80502;80503;80504;80505;80506;80507;80508;80509;80510;80511 80506 10 EHEQTDSEIK Unmodified 1214.5415 0.54151026 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.4 2.04 1 1 23 2 2 2 2 2 2 1 2 2 2 2 2 2 6.8379 6.6856 2;3 3.0154E-06 4784 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 172.23 143.08 110950000 0 15433000 0 6898600 7969100 6754900 10744000 12852000 5566600 5903600 5328000 7146600 9031800 5883600 11440000 11851 2556 10809 100754;100755;100756;100757;100758;100759;100760;100761;100762;100763;100764;100765;100766;100767;100768;100769;100770;100771;100772;100773;100774;100775;100776;100777;100778 80512;80513;80514;80515;80516;80517;80518;80519;80520;80521;80522 80514 11 EHERITDVLDQK Unmodified 1481.7474 0.74742071 3998 Q96T51 RUFY1 RUN and FYVE domain-containing protein 1 yes yes 0 0 1 By MS/MS By matching 2 0 2 1 1 50.786 46.752 3 0.0081819 63671 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.189 24.611 18882000 18805000 76818 0 0 0 0 0 0 0 0 0 0 0 0 0 11852 3998 10810 100779;100780 80523 80523 1 EHEVFQR Unmodified 943.45118 0.45117911 440 O60884 DNAJA2 DnaJ homolog subfamily A member 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 14.946 15.102 2 0.024152 14517 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 83.377 26.275 118090000 0 0 0 6931500 6520700 6896500 8976800 7743900 6302400 10946000 21462000 14181000 0 0 28130000 11853 440 10811 100781;100782;100783;100784;100785;100786;100787;100788;100789;100790 80524;80525;80526;80527 80524 4 EHEVSIQR Unmodified 996.49886 0.49885759 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 1 2 1 13.978 14.073 2 0.01026 13241 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 80.229 13.236 21202000 0 0 0 1693200 2290200 1865100 2365600 1945800 1824900 3903500 4827400 0 0 485940 0 11854 2291 10812 100791;100792;100793;100794;100795;100796;100797;100798;100799;100800;100801;100802;100803 80528;80529;80530;80531;80532;80533;80534;80535;80536;80537;80538 80532 11 EHEVSIQRTEK Unmodified 1354.6841 0.68409218 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 15.192 11.983 3 0.012283 15131 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 55.401 37.305 17463000 5529800 0 11933000 0 0 0 0 0 0 0 0 0 0 0 0 11855 2291 10813 100804;100805 80539 80539 1 EHEVTIFVR Unmodified 1128.5928 0.59275797 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 33 2 3 3 6 6 7 2 2 2 52.809 52.86 2 2.0454E-09 58148 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 163.99 93.073 827540000 0 0 0 12016000 25911000 66537000 113010000 163040000 270790000 34742000 37532000 103950000 0 0 0 11856 1714 10814 100806;100807;100808;100809;100810;100811;100812;100813;100814;100815;100816;100817;100818;100819;100820;100821;100822;100823;100824;100825;100826;100827;100828;100829;100830;100831;100832;100833;100834;100835;100836;100837;100838 80540;80541;80542;80543;80544;80545;80546;80547;80548;80549;80550;80551;80552;80553;80554;80555;80556;80557;80558;80559;80560;80561;80562;80563;80564;80565;80566;80567;80568;80569;80570;80571;80572;80573;80574;80575;80576;80577;80578;80579;80580 80565 39 EHEVTIFVRR Unmodified 1284.6939 0.693869 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 1 By MS/MS By MS/MS 10 0 3 1 2 42.522 42.631 3 0.01117 48035 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 41.704 26.56 48765000 0 0 0 0 0 7063800 0 0 41702000 0 0 0 0 0 0 11857 1714 10815 100839;100840;100841 80581;80582;80583 80583 3 EHEWMYTEALESLK Unmodified 1764.8029 0.80288668 4402 Q9H4L7 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 yes yes 0 0 0 By MS/MS 2 0 1 1 89.084 80.953 3 0.00024754 105209 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.589 71.546 8478500 8478500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11858 4402 10816 100842 80584 80584 1 EHFGAREETHQK Unmodified 1467.6855 0.68548916 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 6.7751 6.9438 3 6.2045E-11 4274 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 119.74 77.66 27135000 0 0 0 0 0 1317900 0 2218200 0 0 0 4229900 0 4391100 14978000 11859 1286 10817 100843;100844;100845;100846;100847 80585;80586 80585 2 EHFQDDVFNEK Unmodified 1406.6103 0.61025853 1481 P43490 NAMPT Nicotinamide phosphoribosyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.29 6 1 24 2 3 2 2 2 2 2 2 2 2 2 2 2 2 2 47.415 46.242 2;3 3.6827E-29 61083 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 235.06 202.65 559770000 54306000 173330000 40114000 20028000 9504100 22515000 13540000 20212000 9690100 20361000 29456000 30436000 24178000 25310000 66792000 11860 1481 10818 100848;100849;100850;100851;100852;100853;100854;100855;100856;100857;100858;100859;100860;100861;100862;100863;100864;100865;100866;100867;100868;100869;100870;100871;100872;100873;100874;100875;100876;100877;100878 80587;80588;80589;80590;80591;80592;80593;80594;80595;80596;80597;80598;80599;80600;80601;80602;80603;80604;80605;80606;80607;80608;80609 80592 19 EHGAFDAVK Unmodified 972.46649 0.46649483 953 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS 10 0 1 1 20.693 20.855 2 0.041714 21529 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 61.602 44.237 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11861 953 10819 100879 80610 80610 1 EHGAVAVER Unmodified 966.48829 0.4882929 5046 Q9UNZ2 NSFL1C NSFL1 cofactor p47 yes yes 0 0 0 By MS/MS 2 0 1 1 11.62 9.3559 2 0.038701 11896 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 61.582 39.09 7895800 0 0 7895800 0 0 0 0 0 0 0 0 0 0 0 0 11862 5046 10820 100880 80611 80611 1 EHGAVAVERVTK Unmodified 1294.6993 0.69934831 5046 Q9UNZ2 NSFL1C NSFL1 cofactor p47 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 22.722 18.605 3 3.9089E-27 26877 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 160.67 133.25 481940000 435590000 0 46349000 0 0 0 0 0 0 0 0 0 0 0 0 11863 5046 10821 100881;100882;100883 80612;80613;80614;80615 80614 3 EHGLIFMETSAK Oxidation (M) 1377.6599 0.65985126 1828 P61019;Q8WUD1 RAB2A;RAB2B Ras-related protein Rab-2A;Ras-related protein Rab-2B yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 2 1 2 1 2 1 1 2 1 2 1 46.656 46.86 2;3 1.8946E-06 52502 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 110.08 102.71 252490000 0 0 0 0 15755000 20598000 25445000 16415000 19407000 22536000 27677000 36050000 27247000 14413000 26945000 11864 1828 10822 100884;100885;100886;100887;100888;100889;100890;100891;100892;100893;100894;100895;100896;100897;100898;100899;100900 80616;80617;80618;80619;80620;80621;80622;80623;80624;80625;80626;80627;80628;80629;80630;80631 80621 2970 13 EHGLIFMETSAK Unmodified 1361.6649 0.66493664 1828 P61019;Q8WUD1 RAB2A;RAB2B Ras-related protein Rab-2A;Ras-related protein Rab-2B yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 2 62.195 62.367 2;3 0.0019473 71997 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 61.419 52.131 85315000 0 0 0 0 4141600 4548300 4436600 9351000 5442800 0 8240400 16952000 5881000 6772400 19549000 11865 1828 10822 100901;100902;100903;100904;100905;100906;100907;100908;100909;100910;100911 80632;80633;80634;80635;80636;80637 80637 5 EHGLSIQGNK Unmodified 1081.5516 0.55162144 4622 Q9NS91 RAD18 E3 ubiquitin-protein ligase RAD18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 3 6 1 1 1 1 1 1 1 1 1 19.786 18.641 2 0.0032496 25646 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.668 52.221 37422000 12282000 6601600 8720700 1178400 0 0 1033300 0 0 0 1832800 0 2060900 1217900 2494200 11866 4622 10823 100912;100913;100914;100915;100916;100917;100918;100919;100920 80638;80639;80640 80638 3 EHGPENIVMAIAGNK Unmodified 1578.7824 0.78242601 2336 Q13636 RAB31 Ras-related protein Rab-31 yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 77.163 75.985 3 0.00095439 98244 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.52 29.714 28008000 8092000 0 0 0 0 0 0 1990300 0 0 3589800 5561100 0 3788700 4986600 11867 2336 10824 100921;100922;100923;100924;100925;100926 80641;80642 80642 2 EHGTALYQVDLLVK Unmodified 1584.8512 0.8511575 1636 P50748 KNTC1 Kinetochore-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 1 2 82.645 78.262 3 0.0056361 101177 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 30.874 17.725 10443000 5574400 0 4868600 0 0 0 0 0 0 0 0 0 0 0 0 11868 1636 10825 100927;100928;100929 80643;80644 80643 2 EHGTDFFDK Unmodified 1094.4669 0.46688876 2473 Q15018 FAM175B BRISC complex subunit Abro1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 4 3.46 3 1 1 1 1 1 40.233 36.555 2 0.0021179 48339 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.89 71.464 53266000 10179000 25207000 12969000 0 0 0 0 0 0 0 0 0 0 0 4910800 11869 2473 10826 100930;100931;100932;100933 80645;80646;80647 80645 3 EHGVGGVSQCPEPGLR Unmodified 1677.7893 0.7893023 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 1 1 1 1 2 2 1 1 2 2 1 37.22 37.413 3 2.5038E-05 41465 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 82.483 72.562 469160000 0 0 0 24659000 25990000 39615000 31751000 31083000 28462000 42252000 45318000 56399000 50704000 40668000 52259000 11870 4285 10827 100934;100935;100936;100937;100938;100939;100940;100941;100942;100943;100944;100945;100946;100947;100948;100949 80648;80649;80650;80651;80652;80653;80654;80655;80656;80657;80658 80649 5 EHHFEAIALVEK Unmodified 1421.7303 0.73031409 333 O43488 AKR7A2 Aflatoxin B1 aldehyde reductase member 2 yes yes 0 0 0 By MS/MS 1 0 1 1 109.4 114.66 3 0.00039504 95968 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 88.021 62.782 7145700 7145700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11871 333 10828 100950 80659 80659 1 EHHTVEAPGGQK Unmodified 1288.616 0.61601261 2164 Q08AD1 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 6.8889 6.6767 2;3 2.2764E-13 7082 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 153.05 135.23 134910000 0 0 53299000 6101300 4887900 6716700 6779500 5469500 7287000 9505300 11294000 3356000 6588500 6298100 7331100 11872 2164 10829 100951;100952;100953;100954;100955;100956;100957;100958;100959;100960;100961;100962;100963;100964 80660;80661;80662;80663;80664;80665;80666;80667;80668;80669;80670;80671;80672 80668 11 EHIAASVSIPSEK Unmodified 1366.7092 0.70924429 1502 P46379 BAG6 Large proline-rich protein BAG6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 6.5 3.92 7 1 10 2 4 2 1 2 1 1 2 1 2 49.936 47.563 2;3 3.2548E-18 61662 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.08 101.67 718260000 31632000 329460000 135090000 11971000 0 0 0 25641000 0 36183000 3625400 55308000 31991000 0 57356000 11873 1502 10830 100965;100966;100967;100968;100969;100970;100971;100972;100973;100974;100975;100976;100977;100978;100979;100980;100981;100982 80673;80674;80675;80676;80677;80678;80679;80680;80681;80682;80683;80684;80685;80686;80687;80688;80689;80690;80691 80674 12 EHIMQMLQNPDWK 2 Oxidation (M) 1700.7651 0.76506139 149 O00410 IPO5 Importin-5 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching 10 0 10 1 2 1 1 1 2 1 1 47.412 47.558 3 0.00015131 53411 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 73.927 61.545 52049000 0 0 0 0 4188400 18648000 0 2564900 1886900 17457000 0 4717000 2586200 0 0 11874 149 10831 100983;100984;100985;100986;100987;100988;100989;100990;100991;100992 80692;80693;80694 80693 200;201 3 EHIMQMLQNPDWK Oxidation (M) 1684.7701 0.77014677 149 O00410 IPO5 Importin-5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 71.6 65.139 2;3 0.00049019 83791 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.239 70.452 58315000 33161000 24441000 712980 0 0 0 0 0 0 0 0 0 0 0 0 11875 149 10831 100993;100994;100995;100996 80695;80696;80697 80695 200;201 2 EHINSVSAMK Unmodified 1114.5441 0.54409322 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 20.873 20.295 2 9.8432E-13 27475 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 182.16 131.26 302270000 0 168640000 56980000 3692400 3897700 5951400 4357200 5695800 3686600 9017800 7563100 8134400 6340500 5414300 12898000 11876 2392 10832 100997;100998;100999;101000;101001;101002;101003;101004;101005;101006;101007;101008;101009;101010;101011 80698;80699;80700;80701;80702;80703;80704;80705;80706;80707;80708;80709;80710;80711;80712;80713 80702 14 EHINSVSAMK Oxidation (M) 1130.539 0.53900784 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.12 3.89 3 1 4 1 2 1 1 1 1 1 11.433 9.6476 2 0.00082226 12530 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 167.06 137.91 226500000 18742000 146040000 43397000 3898700 0 0 0 0 0 0 0 8434700 0 0 5982800 11877 2392 10832 101012;101013;101014;101015;101016;101017;101018;101019 80714;80715;80716;80717;80718;80719;80720 80719 3902 6 EHITQLEK Unmodified 996.52401 0.52400971 3242 Q8IWJ2 GCC2 GRIP and coiled-coil domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By matching 7.33 3.77 1 2 1 1 1 19.219 18.328 2 0.016257 23525 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 92.47 44.727 26017000 0 0 23999000 0 0 0 1085700 0 932230 0 0 0 0 0 0 11878 3242 10833 101020;101021;101022 80721;80722 80722 2 EHLAQKPVFLPR Unmodified 1433.8143 0.81431849 3994 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a yes yes 0 0 1 By MS/MS 10 0 1 1 48.108 48.848 3 0.015059 54620 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 68.436 59.148 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11879 3994 10834 101023 80723 80723 1 EHLDTLNK Unmodified 968.49271 0.49270958 3988 Q96SB8 SMC6 Structural maintenance of chromosomes protein 6 yes yes 0 0 0 By MS/MS 10 0 1 1 14.745 14.724 2 0.025549 14382 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 58.604 5.8187 3257100 0 0 0 0 0 0 3257100 0 0 0 0 0 0 0 0 11880 3988 10835 101024 80724 80724 1 EHLEALLK Unmodified 951.53893 0.53893149 5121 Q9Y2V7 COG6 Conserved oligomeric Golgi complex subunit 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 56.018 50.038 2 0.0025649 65745 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.46 49.114 32575000 3815900 14300000 14459000 0 0 0 0 0 0 0 0 0 0 0 0 11881 5121 10836 101025;101026;101027 80725;80726 80725 1 EHLEEEIK Unmodified 1025.5029 0.50293991 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 23.043 22.609 2 0.0046368 23318 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 145.34 88.795 283430000 0 11426000 0 9683200 9275300 13012000 15283000 17421000 15910000 22619000 25870000 48892000 38947000 22023000 33072000 11882 2556 10837 101028;101029;101030;101031;101032;101033;101034;101035;101036;101037;101038;101039;101040;101041 80727;80728;80729;80730;80731;80732;80733;80734;80735;80736;80737 80732 11 EHLIDELDYILLPTEGWNK Unmodified 2297.158 0.15796379 5198 Q9Y4E8 USP15 Ubiquitin carboxyl-terminal hydrolase 15 yes yes 0 0 0 By MS/MS 2 0 1 1 99.855 91.725 3 4.0164E-53 118224 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 112.16 103.66 19909000 19909000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11883 5198 10838 101042 80738 80738 1 EHLLLAR Unmodified 850.50249 0.5024864 1572 P49411 TUFM Elongation factor Tu, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 35.099 35.18 2 0.023412 37450 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 86.512 45.826 20837000 0 0 0 0 2059100 0 3901000 2843600 0 0 0 0 5805300 6227600 0 11884 1572 10839 101043;101044;101045;101046;101047 80739;80740;80741 80740 3 EHLLQGLLPDVQVPTSVK Unmodified 1972.0993 0.099326699 28 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 95.07 88.572 3 4.4484E-05 112213 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.453 44.17 25412000 7649700 17763000 0 0 0 0 0 0 0 0 0 0 0 0 0 11885 28 10840 101048;101049 80742;80743 80743 2 EHLLQSNIGTGEK Unmodified 1424.726 0.72595699 2816 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.54 3 3 2 21 2 3 2 2 1 2 2 1 2 2 2 1 2 2 38.002 36.993 2;3 1.6248E-106 39096 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 244.01 206.66 427810000 64473000 64571000 0 23334000 19705000 7628600 31747000 35115000 5239800 22871000 29415000 13011000 12887000 38743000 59071000 11886 2816 10841 101050;101051;101052;101053;101054;101055;101056;101057;101058;101059;101060;101061;101062;101063;101064;101065;101066;101067;101068;101069;101070;101071;101072;101073;101074;101075 80744;80745;80746;80747;80748;80749;80750;80751;80752;80753;80754;80755;80756;80757;80758;80759;80760;80761;80762;80763;80764;80765;80766;80767 80749 19 EHLLTNHLK Unmodified 1103.6087 0.60874239 916 P10155 TROVE2 60 kDa SS-A/Ro ribonucleoprotein yes yes 0 0 0 By MS/MS 10 0 1 1 23.618 24.279 2 0.009185 24718 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.464 26.435 4794900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4794900 11887 916 10842 101076 80768 80768 1 EHLMLEEELR Oxidation (M) 1313.6286 0.62855113 1029 P15924 DSP Desmoplakin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 14 1 1 1 2 1 1 1 2 1 2 1 52.435 52.673 2;3 0.0010423 60010 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 75.652 66.923 103180000 0 0 0 9431800 0 11112000 5819900 18693000 3018800 4151300 12091000 16613000 3621500 8237100 10390000 11888 1029 10843 101077;101078;101079;101080;101081;101082;101083;101084;101085;101086;101087;101088;101089;101090 80769;80770;80771;80772;80773;80774;80775;80776 80770 1428 7 EHLMLEEELR Unmodified 1297.6336 0.63363651 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By matching By MS/MS By matching By matching By matching 10 0 5 1 1 1 1 1 61.534 61.657 3 0.039559 70445 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 40.727 40.727 17317000 0 0 0 1906500 0 0 0 5496300 0 0 3386200 0 2505400 0 4022500 11889 1029 10843 101091;101092;101093;101094;101095 80777 80777 0 EHLTEQINVEEK Unmodified 1467.7205 0.72053726 3631 Q92576 PHF3 PHD finger protein 3 yes yes 0 0 0 By MS/MS 3 0 1 1 44.049 39.242 3 0.0066206 48951 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 53.6 40.62 5295500 0 5295500 0 0 0 0 0 0 0 0 0 0 0 0 0 11890 3631 10844 101096 80778 80778 1 EHLTSEAASGNHR Unmodified 1407.6491 0.64910365 4264 Q9BZF9 UACA Uveal autoantigen with coiled-coil domains and ankyrin repeats yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 7.2414 7.357 3 1.0459E-11 5402 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 120.55 106.29 109500000 0 0 0 4269800 5104900 6319100 5327400 0 0 13738000 21217000 14887000 8763800 13496000 16383000 11891 4264 10845 101097;101098;101099;101100;101101;101102;101103;101104;101105;101106 80779;80780;80781;80782;80783;80784;80785;80786 80783 6 EHLTTVLDK Unmodified 1054.5659 0.56587452 4837 Q9UBD5 ORC3 Origin recognition complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 35.317 35.062 2 0.0015179 48227 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 132.38 103.89 154190000 0 65813000 0 4376700 4201600 8289700 5421700 6506700 0 12063000 9622000 6406800 10843000 8795200 11848000 11892 4837 10846 101107;101108;101109;101110;101111;101112;101113;101114;101115;101116;101117;101118;101119 80787;80788;80789;80790;80791;80792;80793;80794;80795;80796;80797;80798 80790 11 EHMDAINHDTK Oxidation (M) 1325.567 0.56701351 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 5.7496 5.8634 3 0.00017286 2714 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 79.659 71.172 90500000 0 0 0 0 6158300 8831700 8338000 6432400 6618300 0 12651000 18932000 10820000 11719000 0 11893 5071 10847 101120;101121;101122;101123;101124;101125;101126;101127;101128;101129 80799;80800;80801;80802;80803;80804;80805;80806;80807 80804 6443 9 EHMDAINHDTK Unmodified 1309.5721 0.57209888 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.65 3.65 5 12 1 2 2 1 1 1 1 1 1 1 1 1 1 1 1 11.085 10.287 2;3 2.0824E-06 13874 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.16 128.12 214950000 12020000 42960000 60527000 5171900 4126000 8275400 5291000 4895500 3763800 8816600 12005000 13426000 11102000 9526100 13046000 11894 5071 10847 101130;101131;101132;101133;101134;101135;101136;101137;101138;101139;101140;101141;101142;101143;101144;101145;101146 80808;80809;80810;80811;80812;80813;80814;80815;80816;80817;80818;80819;80820;80821;80822;80823 80811 16 EHMESRMVTETEETQEK Unmodified 2092.9041 0.90413364 2890 Q6IQ49 SDE2 Protein SDE2 homolog yes yes 0 0 1 By MS/MS 2 0 1 1 33.765 30.458 3 0.026407 38508 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 25.957 17.248 2578200 0 0 2578200 0 0 0 0 0 0 0 0 0 0 0 0 11895 2890 10848 101147 80824 80824 1 EHMQPTHPIR Unmodified 1244.6084 0.60842481 1869 P61981 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 1 1 1 1 2 1 2 2 2 1 2 13.375 13.584 2;3 0.00052219 12035 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 126.41 106.63 383810000 0 0 0 7050100 5733500 13249000 5885900 12190000 5085800 23015000 50278000 48020000 20435000 35349000 157520000 11896 1869 10849 101148;101149;101150;101151;101152;101153;101154;101155;101156;101157;101158;101159;101160;101161;101162;101163;101164 80825;80826;80827;80828;80829;80830;80831;80832;80833;80834;80835;80836 80828 4 EHMQPTHPIR Oxidation (M) 1260.6033 0.60333943 1869 P61981 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 2 2 2 2 1 2 2 7.036 7.2181 2;3 0.00063024 4893 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 85.533 72.917 310150000 0 0 0 0 5742300 0 8792400 0 0 24120000 88942000 34160000 18449000 35854000 94090000 11897 1869 10849 101165;101166;101167;101168;101169;101170;101171;101172;101173;101174;101175;101176;101177;101178 80837;80838;80839;80840;80841 80837 3026 4 EHMSSSSSLQSR Oxidation (M) 1350.5834 0.58339185 4325 Q9H0E3 SAP130 Histone deacetylase complex subunit SAP130 yes yes 0 1 0 By MS/MS By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 6.1798 6.2767 3 0.0019067 4379 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 51.013 47.541 18223000 0 0 0 1809800 2248800 1672600 0 0 1135000 2683300 1581400 3114900 2172900 1804200 0 11898 4325 10850 101179;101180;101181;101182;101183;101184;101185;101186;101187 80842 80842 5789 1 EHMSSSSSLQSREEK Oxidation (M) 1736.7635 0.76354106 4325 Q9H0E3 SAP130 Histone deacetylase complex subunit SAP130 yes yes 0 1 1 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 6.5114 6.6651 3 0.00077308 4477 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 48.351 38.551 27215000 0 0 0 2133200 0 2572000 0 2441100 3080800 4217200 3199900 2556200 0 3445900 3568400 11899 4325 10851 101188;101189;101190;101191;101192;101193;101194;101195;101196 80843;80844 80843 5789 2 EHMSSSSSLQSREEK Unmodified 1720.7686 0.76862644 4325 Q9H0E3 SAP130 Histone deacetylase complex subunit SAP130 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 10.152 10.387 3 1.8532E-14 8582 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.307 84.016 27961000 0 0 0 0 0 0 3605900 0 0 2816500 3750600 4735300 3584500 4166500 5301400 11900 4325 10851 101197;101198;101199;101200;101201;101202;101203 80845;80846;80847;80848;80849;80850 80847 6 EHNGHITGIDWAPK Unmodified 1573.7637 0.76373948 3655 Q92747 ARPC1A Actin-related protein 2/3 complex subunit 1A yes yes 0 0 0 By MS/MS 2 0 1 1 62.309 54.054 3 0.0042513 73083 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.939 44.737 7011300 7011300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11901 3655 10852 101204 80851 80851 1 EHNGQVTGIDWAPESNR Unmodified 1908.8715 0.87145203 256 O15143 ARPC1B Actin-related protein 2/3 complex subunit 1B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 55.415 55.956 3 0.012984 62859 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.363 34.703 26784000 0 0 0 0 0 0 0 0 0 0 6245800 6918300 0 0 13620000 11902 256 10853 101205;101206;101207 80852 80852 0 EHNNLILLNK Unmodified 1206.6721 0.67207093 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.92 3.89 5 8 2 1 2 1 1 1 1 1 1 1 1 55.408 52.33 2;3 0.00011863 66091 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 189.38 141.81 235000000 135330000 21626000 28880000 9068000 7592500 0 11122000 9497100 0 0 0 0 0 11890000 0 11903 3443 10854 101208;101209;101210;101211;101212;101213;101214;101215;101216;101217;101218;101219;101220 80853;80854;80855;80856;80857;80858;80859;80860;80861;80862;80863;80864 80861 10 EHNPTQYEER Unmodified 1301.5636 0.56364269 4322 Q9H0C8 ILKAP Integrin-linked kinase-associated serine/threonine phosphatase 2C yes yes 0 0 0 By MS/MS 10 0 2 2 12.835 13.242 2;3 0.0064864 11749 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.844 37.411 12928000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12928000 11904 4322 10855 101221;101222 80865;80866 80866 2 EHNVFQNK Unmodified 1014.4883 0.4882929 3151 Q86UP2 KTN1 Kinectin yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 15.516 12.259 2 0.016107 18506 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 184.89 152.96 30690000 21208000 0 9481300 0 0 0 0 0 0 0 0 0 0 0 0 11905 3151 10856 101223;101224 80867;80868 80867 0 EHPDPGSKDPEEDYPK Unmodified 1838.7959 0.79588705 4846 Q9UBL3 ASH2L Set1/Ash2 histone methyltransferase complex subunit ASH2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.72 1.37 1 24 1 2 2 2 2 2 2 2 2 2 2 2 2 23.998 24.024 3;4 1.5109E-06 25419 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 68.283 65.921 297040000 0 7990600 0 21780000 12859000 15924000 15866000 20523000 14928000 23616000 31924000 33567000 31503000 28210000 38348000 11906 4846 10857 101225;101226;101227;101228;101229;101230;101231;101232;101233;101234;101235;101236;101237;101238;101239;101240;101241;101242;101243;101244;101245;101246;101247;101248;101249 80869;80870;80871;80872;80873;80874;80875;80876;80877;80878;80879;80880;80881;80882;80883;80884;80885;80886;80887 80871 19 EHPEILDEDS Unmodified 1182.5041 0.50406212 4707 Q9NWX6 THG1L Probable tRNA(His) guanylyltransferase yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 42.857 37.896 2 0.019156 48923 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.313 61.327 55326000 0 55326000 0 0 0 0 0 0 0 0 0 0 0 0 0 11907 4707 10858 101250;101251;101252 80888;80889 80888 2 EHPEQHVSTVNSK Unmodified 1490.7114 0.71136956 3078 Q7Z333 SETX Probable helicase senataxin yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching 10 0 5 1 1 1 1 1 7.2399 7.3882 3 0.021971 5929 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 33.589 22.33 15027000 0 0 0 893660 0 0 0 2918900 0 2691300 0 2429300 0 0 6093900 11908 3078 10859 101253;101254;101255;101256;101257 80890 80890 1 EHPFILNLQEDQIENLK Unmodified 2079.0637 0.063669474 2769 Q5T1V6 DDX59 Probable ATP-dependent RNA helicase DDX59 yes yes 0 0 0 By MS/MS 2 0 1 1 90.448 82.317 3 0.002412 106888 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.892 36.348 5231000 5231000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11909 2769 10860 101258 80891 80891 1 EHPNYVDCYLR Unmodified 1464.6456 0.64559818 2945 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 53.506 53.86 3 0.0060387 61194 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 38.58 33.438 84629000 0 0 0 0 0 0 0 3844400 4826800 8819400 11310000 18478000 20041000 0 17309000 11910 2945 10861 101259;101260;101261;101262;101263;101264;101265 80892 80892 1 EHPVIESHPDNALEDLRLDK Unmodified 2326.1553 0.15533803 2318 Q13564 NAE1 NEDD8-activating enzyme E1 regulatory subunit yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 2 2 3 1 75.571 69.567 3;4;5 6.4366E-09 90642 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.723 73.731 88618000 77628000 10991000 0 0 0 0 0 0 0 0 0 0 0 0 0 11911 2318 10862 101266;101267;101268;101269 80893;80894;80895;80896 80895 3 EHPVVISK Unmodified 907.51272 0.51271674 1224 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 16.731 15.908 2 0.011165 20902 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 110.22 84.768 370420000 18136000 172320000 87968000 3845100 0 4274500 0 0 0 10032000 14448000 15531000 10739000 12609000 20520000 11912 1224 10863 101270;101271;101272;101273;101274;101275;101276;101277;101278;101279;101280 80897;80898 80897 2 EHPYDAAK Unmodified 929.4243 0.42429566 2639 Q16864 ATP6V1F V-type proton ATPase subunit F yes yes 0 0 0 By matching By MS/MS By matching 2 0 3 1 1 1 7.7656 4.7278 2 0.017407 7015 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.59 93.436 53594000 9385200 40155000 4054100 0 0 0 0 0 0 0 0 0 0 0 0 11913 2639 10864 101281;101282;101283 80899 80899 0 EHQHEEIQNVR Unmodified 1417.6698 0.66983909 2869 Q6DD88 ATL3 Atlastin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 11.98 12.081 3 0.00038248 11346 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.603 48.864 47770000 0 0 0 3907800 3871800 6691400 4284000 3291300 5382800 6248300 3696200 0 4920500 5475700 0 11914 2869 10865 101284;101285;101286;101287;101288;101289;101290;101291;101292;101293 80900;80901;80902;80903;80904;80905;80906;80907 80900 5 EHQQALDVLDMEEPINK Oxidation (M) 2023.9521 0.95207011 2226 Q13042 CDC16 Cell division cycle protein 16 homolog yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 67.169 66.517 3 3.7829E-27 85183 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.86 114.07 203840000 0 86569000 0 4754100 7751700 11634000 5930400 6334400 7345700 11003000 11777000 14106000 11864000 11870000 12896000 11915 2226 10866 101294;101295;101296;101297;101298;101299;101300;101301;101302;101303;101304;101305;101306;101307 80908;80909;80910;80911;80912;80913;80914;80915;80916;80917;80918;80919;80920;80921;80922;80923;80924;80925;80926;80927 80913 3615 20 EHQQALDVLDMEEPINK Unmodified 2007.9572 0.95715549 2226 Q13042 CDC16 Cell division cycle protein 16 homolog yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.91 3.42 2 1 8 1 2 1 1 1 1 1 1 1 1 77.731 76.37 3 1.2398E-35 94822 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.65 118.37 141830000 17698000 79844000 0 0 0 3498400 0 3208800 0 3260400 5288000 4915400 2581500 4509200 17024000 11916 2226 10866 101308;101309;101310;101311;101312;101313;101314;101315;101316;101317;101318 80928;80929;80930;80931;80932;80933 80928 6 EHQQELEILK Unmodified 1265.6616 0.66156582 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 46.754 46.963 3 0.032078 51908 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 28.328 12.074 26013000 0 0 0 5172300 0 0 0 0 0 0 7350300 0 0 4145100 9345200 11917 2291 10867 101319;101320;101321;101322 80934;80935 80935 2 EHQQELEILKK Unmodified 1393.7565 0.75652884 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By matching 10 0 5 1 1 1 1 1 36.446 36.682 3 0.022787 40700 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 23.028 13.515 17489000 0 0 0 0 0 0 4096800 2516700 0 2345500 3151100 0 5378600 0 0 11918 2291 10868 101323;101324;101325;101326;101327 80936 80936 1 EHQSLEENQR Unmodified 1268.5745 0.57454173 584 O94782 USP1 Ubiquitin carboxyl-terminal hydrolase 1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 6.9743 7.0949 3 0.0025689 4939 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 60.064 50.409 43782000 0 0 0 2845000 2637100 2733900 3656100 0 5519500 4016400 5773200 3528000 3285000 4684100 5103500 11919 584 10869 101328;101329;101330;101331;101332;101333;101334;101335;101336;101337;101338 80937;80938;80939;80940;80941 80937 5 EHQTSAYSPPRAGQEH Unmodified 1793.8081 0.80812349 3901 Q96K21 ZFYVE19 Abscission/NoCut checkpoint regulator yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 20.798 16.681 2;3 8.4827E-10 23989 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 109.6 103.75 31354000 24784000 0 6570000 0 0 0 0 0 0 0 0 0 0 0 0 11920 3901 10870 101339;101340;101341 80942;80943 80943 2 EHQVVRNEEQK Unmodified 1394.6902 0.69024019 4376 Q9H307 PNN Pinin yes yes 0 0 1 By MS/MS 2 0 1 1 6.0135 3.796 3 6.3426E-05 5505 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 119.34 67.573 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11921 4376 10871 101342 80944 80944 1 EHQVVVVAGDTGCGK Unmodified 1554.746 0.7460405 2375 Q14147 DHX34 Probable ATP-dependent RNA helicase DHX34 yes yes 0 0 0 By MS/MS 3 0 1 1 34.252 29.739 3 0.035174 37086 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 29.129 19.341 3156000 0 3156000 0 0 0 0 0 0 0 0 0 0 0 0 0 11922 2375 10872 101343 80945 80945 1 EHRPGPIGNER Unmodified 1260.6323 0.63233138 2736 Q5JSZ5 PRRC2B Protein PRRC2B yes yes 0 0 1 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 9.9216 10.049 3 0.0060371 8379 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.225 46.57 72018000 0 0 0 4207700 2816800 4264200 5165200 2664300 0 5308800 13762000 11072000 7686100 6062200 9009100 11923 2736 10873 101344;101345;101346;101347;101348;101349;101350;101351;101352;101353;101354 80946;80947;80948;80949;80950;80951;80952;80953 80953 3 EHSAFGDRPEK Unmodified 1271.5895 0.58946351 242 O15027 SEC16A Protein transport protein Sec16A yes yes 0 0 1 By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 10.823 10.92 3 0.0039944 9840 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 73.951 40.863 79409000 0 0 0 5810000 4189800 5370900 8423600 5044700 4629000 9157800 0 0 12616000 8984700 15183000 11924 242 10874 101355;101356;101357;101358;101359;101360;101361;101362;101363;101364 80954;80955;80956;80957;80958 80957 2 EHSLQVSPSLEK Unmodified 1352.6936 0.69359423 631 O95235 KIF20A Kinesin-like protein KIF20A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 41.039 40.174 3 3.1456E-10 54196 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.89 84.149 88517000 0 19103000 0 6360500 6986700 6259200 7617800 0 4973400 8836700 10672000 0 0 6474400 11234000 11925 631 10875 101365;101366;101367;101368;101369;101370;101371;101372;101373;101374;101375;101376 80959;80960;80961;80962;80963;80964;80965;80966;80967;80968;80969 80962 10 EHSSDQPAAASVWK Unmodified 1511.7005 0.70047052 3055 Q7L5Y9 MAEA Macrophage erythroblast attacher yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 41.726 36.988 2;3 3.4588E-10 48361 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.12 98.733 9448200 0 9448200 0 0 0 0 0 0 0 0 0 0 0 0 0 11926 3055 10876 101377;101378 80970;80971 80970 2 EHTALLK Unmodified 810.45995 0.45995289 1070 P18077 RPL35A 60S ribosomal protein L35a yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 14.937 15.048 2 0.023406 14537 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 86.838 44.714 64782000 0 0 0 5119400 4446800 3135000 5592800 3455000 3843100 5923600 12099000 0 10572000 10596000 0 11927 1070 10877 101379;101380;101381;101382;101383;101384;101385;101386;101387;101388 80972;80973;80974 80972 3 EHVEEISELFYDAK Unmodified 1707.7992 0.79918151 5086 Q9Y265 RUVBL1 RuvB-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 3.64 3.02 7 2 2 4 3 2 1 1 83.186 79.79 2;3 1.0826E-101 101114 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 223.08 185.52 621270000 461450000 134590000 17311000 0 0 814170 0 0 0 0 0 0 0 0 7107600 11928 5086 10878 101389;101390;101391;101392;101393;101394;101395;101396;101397;101398;101399 80975;80976;80977;80978;80979;80980;80981;80982;80983;80984;80985;80986;80987 80984 13 EHVIEALR Unmodified 965.52943 0.52942943 1220 P27635 RPL10 60S ribosomal protein L10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 32.572 32.854 2 0.019504 35576 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 63.565 34.416 47070000 0 0 0 0 0 0 0 8662300 4731900 0 10456000 0 13262000 9958300 0 11929 1220 10879 101400;101401;101402;101403;101404 80988;80989;80990 80989 3 EHVKPLFNMEDK Oxidation (M) 1501.7235 0.72351415 2348 Q13867 BLMH Bleomycin hydrolase yes yes 0 1 1 By MS/MS By MS/MS 10 0 2 1 1 31.373 31.555 3 0.0031663 34568 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 47.991 32.604 13009000 0 0 0 4240700 0 0 0 0 0 0 0 0 0 0 8768600 11930 2348 10880 101405;101406 80991 80991 3831 1 EHVLQSSLSQEHK Unmodified 1520.7583 0.75831975 1536 P48382 RFX5 DNA-binding protein RFX5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.04 2.6 3 22 1 1 1 2 2 2 2 2 2 2 2 1 2 2 1 23.625 23.242 2;3 2.6164E-08 24671 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 88.163 75.026 610430000 71783000 9732500 8325900 33715000 40271000 41203000 42735000 43707000 38755000 50031000 47243000 6105500 72474000 74310000 30043000 11931 1536 10881 101407;101408;101409;101410;101411;101412;101413;101414;101415;101416;101417;101418;101419;101420;101421;101422;101423;101424;101425;101426;101427;101428;101429;101430;101431 80992;80993;80994;80995;80996;80997;80998;80999;81000;81001;81002;81003;81004;81005;81006;81007 81006 14 EHVNVVFIGHVDAGK Unmodified 1619.842 0.8419898 1014 P15170;Q8IYD1 GSPT1;GSPT2 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A;Eukaryotic peptide chain release factor GTP-binding subunit ERF3B yes no 0 0 0 By MS/MS 2 0.707 1 2 1 4 80.74 76.679 3 1.0314E-38 95559 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 138.28 131.24 32408000 32408000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11932 1014 10882 101432;101433;101434;101435 81008;81009;81010;81011 81009 2 EHVPREMAAETSK Unmodified 1483.7089 0.70892672 3994 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 24.3 20.227 3 5.2218E-10 28783 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.478 56.631 94612000 69133000 8798500 16680000 0 0 0 0 0 0 0 0 0 0 0 0 11933 3994 10883 101436;101437;101438 81012;81013;81014;81015;81016;81017 81015 6 EHVPREMAAETSK Oxidation (M) 1499.7038 0.70384134 3994 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a yes yes 0 1 1 By MS/MS 2 0 1 1 11.001 8.7483 3 0.012467 11280 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 51.726 34.06 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11934 3994 10883 101439 81018 81018 5474 1 EHVYDLFEK Unmodified 1178.5608 0.56078914 2475 Q15020 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes yes 0 0 0 By matching By matching By matching By matching By MS/MS 10 0 6 1 1 1 1 2 60.614 60.987 2;3 0.0051146 68808 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.168 54.25 17672000 0 0 0 0 0 1420800 0 0 0 0 1795200 2157400 0 2157700 10141000 11935 2475 10884 101440;101441;101442;101443;101444;101445 81019;81020 81020 2 EHYPNGVCTVYGK Unmodified 1522.6875 0.68746299 1524 P47755 CAPZA2 F-actin-capping protein subunit alpha-2 yes yes 0 0 0 By matching By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 44.084 38.921 3 0.0064858 50668 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 50.897 43.172 67926000 5415600 41847000 20664000 0 0 0 0 0 0 0 0 0 0 0 0 11936 1524 10885 101446;101447;101448;101449 81021;81022;81023 81022 3 EHYPVSSPSSPSPPAQPGGVSR Unmodified 2219.0607 0.060709361 472 O75179 ANKRD17 Ankyrin repeat domain-containing protein 17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.74 46.906 3 5.4621E-08 52209 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 58.712 54.839 122060000 0 0 0 5768200 4607100 5781800 8684600 8089500 7837800 14154000 13073000 15432000 12782000 9110100 16739000 11937 472 10886 101450;101451;101452;101453;101454;101455;101456;101457;101458;101459;101460;101461 81024;81025;81026;81027;81028;81029;81030;81031;81032;81033;81034;81035 81034 10 EHYVDLK Unmodified 902.44978 0.44978213 1022 P15531 NME1 Nucleoside diphosphate kinase A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 25.2 24.028 2 0.011925 24741 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 116.54 61.101 8080300000 613720000 1075800000 1384700000 201440000 363670000 319050000 529570000 684770000 506320000 473290000 496910000 1228700000 21125000 43914000 137280000 11938 1022 10887 101462;101463;101464;101465;101466;101467;101468;101469;101470;101471;101472;101473;101474;101475;101476;101477;101478 81036;81037;81038;81039;81040;81041;81042;81043;81044;81045;81046;81047;81048;81049;81050;81051;81052;81053;81054;81055;81056;81057;81058;81059;81060 81037 25 EIAAVIETV Unmodified 943.52261 0.52261272 3096 Q7Z4G1 COMMD6 COMM domain-containing protein 6 yes yes 0 0 0 By MS/MS 1 0 1 1 105.42 110.69 2 0.0073129 91173 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 94.407 55.989 14967000 14967000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11939 3096 10888 101479 81061 81061 1 EIAAVISPELEHLDK Unmodified 1662.8829 0.88285156 2838 Q63HN8 RNF213 E3 ubiquitin-protein ligase RNF213 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 83.007 78.351 3 3.9345E-16 98772 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.2 105.59 111080000 11962000 95351000 3768000 0 0 0 0 0 0 0 0 0 0 0 0 11940 2838 10889 101480;101481;101482;101483 81062;81063;81064;81065 81062 4 EIADFDIFDDPESPFSTFNFQYPNQAFK Unmodified 3328.4877 0.48769036 1522 P47712 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 100.79 95.021 3 4.2536E-78 119832 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 128.12 116.61 25796000 22645000 3151100 0 0 0 0 0 0 0 0 0 0 0 0 0 11941 1522 10890 101484;101485 81066;81067 81067 2 EIADYLAAGK Unmodified 1049.5393 0.53932542 1728 P53990 IST1 IST1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 56.231 55.578 2 0.0024676 62309 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.313 40.095 106700000 0 52760000 0 4218000 2080900 5735200 3274400 3460300 2076200 6068200 6732700 4729100 4622000 4100900 6842300 11942 1728 10891 101486;101487;101488;101489;101490;101491;101492;101493;101494;101495;101496;101497;101498;101499 81068;81069;81070;81071;81072;81073;81074;81075;81076;81077;81078;81079;81080;81081 81072 13 EIAEAYDVLSDPR Unmodified 1476.7096 0.70963822 1191 P25685 DNAJB1 DnaJ homolog subfamily B member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 72.034 72.278 2 7.3258E-08 83593 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 114.83 94.056 59618000 0 0 0 0 0 0 9999900 0 0 0 0 11727000 7428000 0 30463000 11943 1191 10892 101500;101501;101502;101503 81082;81083;81084 81083 3 EIAEAYDVLSDPRK Unmodified 1604.8046 0.80460124 1191 P25685 DNAJB1 DnaJ homolog subfamily B member 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.58 6 1 17 2 3 2 1 1 1 1 1 1 2 2 1 2 2 2 65.884 64.31 2;3 0.00011417 73416 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 76.262 61.575 791220000 81480000 393330000 21134000 6623500 5936400 19777000 12656000 12440000 14055000 34347000 30283000 17666000 17799000 31767000 91924000 11944 1191 10893 101504;101505;101506;101507;101508;101509;101510;101511;101512;101513;101514;101515;101516;101517;101518;101519;101520;101521;101522;101523;101524;101525;101526;101527 81085;81086;81087;81088;81089;81090;81091;81092;81093;81094;81095;81096;81097;81098;81099;81100;81101;81102;81103;81104;81105 81097 20 EIAEAYLGGK Unmodified 1049.5393 0.53932542 1743 P54652 HSPA2 Heat shock-related 70 kDa protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 7.86 3.4 1 1 5 2 1 1 1 1 1 49.488 48.231 2 0.0044557 61619 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.542 37.06 223680000 0 190060000 0 0 0 0 0 6973600 0 0 6272800 0 4451800 3611000 12310000 11945 1743 10894 101528;101529;101530;101531;101532;101533;101534 81106;81107;81108;81109 81106 4 EIAEAYLGK Unmodified 992.51786 0.51786169 934 P11142 HSPA8 Heat shock cognate 71 kDa protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.85 3.86 7 1 12 2 4 2 1 1 1 1 1 1 1 1 1 1 1 1 48.348 47.038 2 0.0044493 52883 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 86.794 20.707 20067000000 586950000 13985000000 284120000 192160000 204590000 262500000 264520000 213550000 244360000 384900000 678380000 568820000 382150000 480880000 1334000000 11946 934 10895 101535;101536;101537;101538;101539;101540;101541;101542;101543;101544;101545;101546;101547;101548;101549;101550;101551;101552;101553;101554 81110;81111;81112;81113;81114;81115;81116;81117;81118;81119;81120;81121;81122;81123;81124;81125;81126;81127;81128;81129;81130;81131;81132;81133 81123 23 EIAEAYLGYPVTNAVITVPAYFNDSQRQATK Unmodified 3428.7252 0.72523529 908 P0DMV9;P0DMV8 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 0 0 1 By MS/MS 2 0 1 1 97.343 92.57 3 1.2225E-20 114647 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.755 72.37 26972000 0 26972000 0 0 0 0 0 0 0 0 0 0 0 0 0 11947 908 10896 101555 81134 81134 1 EIAEELFTR Unmodified 1106.5608 0.56078914 2053 Q01433 AMPD2 AMP deaminase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.36 2.01 1 10 1 1 1 1 1 1 1 1 1 1 1 69.929 69.6 2 0.0031256 79601 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 91.069 68.577 47641000 0 2648200 0 2530500 1848600 3012500 3142100 3003900 4389800 0 7042100 10280000 3614300 6129000 0 11948 2053 10897 101556;101557;101558;101559;101560;101561;101562;101563;101564;101565;101566 81135;81136;81137;81138;81139;81140;81141;81142;81143 81137 9 EIAENALGK Unmodified 943.49746 0.4974606 1308 P31942 HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 2 1 1 1 1 1 1 1 1 1 29.359 28.919 2 0.0033609 30826 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 90.308 39.411 539730000 0 211050000 1471000 12902000 20844000 19383000 24530000 16091000 21008000 49173000 37153000 26852000 0 32227000 67045000 11949 1308 10898 101567;101568;101569;101570;101571;101572;101573;101574;101575;101576;101577;101578;101579;101580 81144;81145;81146;81147;81148;81149;81150;81151;81152;81153;81154;81155;81156 81150 13 EIAENITK Unmodified 916.48656 0.48656157 1733 P54136 RARS Arginine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 25.877 26.127 2 0.0075833 27440 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 89.142 16.788 433200000 0 0 0 0 22093000 39631000 27036000 26018000 0 43843000 49687000 65645000 37197000 44737000 77310000 11950 1733 10899 101581;101582;101583;101584;101585;101586;101587;101588;101589;101590 81157;81158;81159;81160;81161;81162;81163;81164;81165 81164 5 EIAEPLFDLK Unmodified 1173.6281 0.62814043 5260 Q9Y613 FHOD1 FH1/FH2 domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 82.425 82.463 2 0.003862 94566 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 73.985 23.378 58583000 0 0 0 2410200 2510200 4714100 0 4674400 0 4879200 5451200 6971600 8069400 8113800 10789000 11951 5260 10900 101591;101592;101593;101594;101595;101596;101597;101598;101599;101600 81166;81167;81168;81169;81170 81167 5 EIAETRFEVAQVESLR Unmodified 1875.969 0.96904081 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 74.774 74.89 3 0.012328 85868 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 24.893 21.542 88620000 0 0 0 0 1898000 6851100 4645700 4625500 7352300 10438000 10659000 12010000 4344600 6252000 19544000 11952 965 10901 101601;101602;101603;101604;101605;101606;101607;101608;101609;101610;101611 81171;81172;81173 81171 3 EIAEVNEINLEK Unmodified 1399.7195 0.71947463 1636 P50748 KNTC1 Kinetochore-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 65.307 64.355 2 4.8158E-13 80687 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 151.07 120.39 340120000 5975600 291010000 0 0 3882000 4167900 2866700 3485200 1664300 3907000 4591300 4933300 3568000 3253700 6822700 11953 1636 10902 101612;101613;101614;101615;101616;101617;101618;101619;101620;101621;101622;101623;101624 81174;81175 81174 2 EIAGHIMEFSQDQHGSR Oxidation (M) 1956.8748 0.87482285 2425 Q14671 PUM1 Pumilio homolog 1 yes yes 0 1 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 38.955 39.183 3 6.7439E-05 43526 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 65.231 50.771 61715000 0 0 0 8783500 0 11614000 0 0 0 0 8745900 0 10297000 7353900 14920000 11954 2425 10903 101625;101626;101627;101628;101629;101630 81176;81177;81178 81177 3979 3 EIAITHHVK Unmodified 1046.5873 0.58727866 1672 P51812 RPS6KA3 Ribosomal protein S6 kinase alpha-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 17.01 17.261 2 0.017618 17341 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 55.531 36.8 17640000 0 0 0 0 0 1646700 0 971260 832040 1868700 0 2895500 2771600 1869500 4784500 11955 1672 10904 101631;101632;101633;101634;101635;101636;101637;101638 81179;81180 81179 2 EIAQDFK Unmodified 849.42323 0.42323303 1966 Q71DI3;Q16695;P84243;P68431 HIST2H3A;HIST3H3;H3F3A;HIST1H3A Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1 yes no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.071 28.266 2 0.023412 30463 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 86.512 9.1381 631960000 0 0 0 71361000 46084000 51712000 53423000 40440000 30227000 63236000 53540000 72273000 69206000 30541000 49918000 11956 1966 10905 101639;101640;101641;101642;101643;101644;101645;101646;101647;101648;101649;101650 81181;81182;81183;81184;81185;81186;81187;81188;81189;81190;81191 81182 11 EIARAVVEK Unmodified 1013.5869 0.58694431 442 O60888 CUTA Protein CutA yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 24.189 20.508 2 0.00078222 25741 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 152.34 83.426 661940000 0 271710000 390230000 0 0 0 0 0 0 0 0 0 0 0 0 11957 442 10906 101651;101652;101653 81192;81193;81194 81194 1 EIAVHIGDRDNAVR Unmodified 1563.8118 0.8117523 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 1 By MS/MS 10 0 1 1 40.623 41.376 3 0.04686 45492 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 18.391 0 18794000 0 0 0 0 0 0 0 0 0 0 0 18794000 0 0 0 11958 2361 10907 101654 81195 81195 1 EIAVTVK Unmodified 758.4538 0.45380487 4065 Q99832 CCT7 T-complex protein 1 subunit eta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.219 32.405 2 0.049912 34410 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 63.306 5.495 669640000 0 0 0 27784000 26014000 47794000 45416000 40443000 28647000 56086000 72086000 107940000 64089000 53246000 100100000 11959 4065 10908 101655;101656;101657;101658;101659;101660;101661;101662;101663;101664;101665;101666 81196 81196 1 EICELTGIDQSVLER Unmodified 1760.8615 0.86146419 367 O43795 MYO1B Unconventional myosin-Ib yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.874 79.978 2 9.9795E-27 92622 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 127.37 109.31 42220000 0 0 0 0 3270300 3328200 2659500 3219900 3062500 4747600 4143900 5256300 3733500 2721600 6076400 11960 367 10909 101667;101668;101669;101670;101671;101672;101673;101674;101675;101676;101677 81197;81198;81199;81200;81201;81202;81203;81204;81205;81206 81205 10 EICLQSQSK Unmodified 1091.5281 0.5281088 4577 Q9NQW6 ANLN Actin-binding protein anillin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.646 24.849 2 0.0033124 26239 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 93.429 55.295 91362000 0 0 0 7044000 5314300 5289000 4827200 5276600 4818400 5924500 8708800 11096000 9263100 5733200 18066000 11961 4577 10910 101678;101679;101680;101681;101682;101683;101684;101685;101686;101687;101688;101689 81207;81208;81209;81210;81211;81212;81213;81214;81215;81216 81207 10 EICNAYTELNDPMR Unmodified 1724.7498 0.74980525 2485 Q15046 KARS Lysine--tRNA ligase yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 68.297 68.659 2 0.00048082 78191 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.913 84.941 19284000 0 0 0 0 0 0 0 0 0 0 0 3735400 0 1959100 13589000 11962 2485 10911 101690;101691;101692 81217 81217 1 EICNAYTELNDPMRQR Unmodified 2008.9095 0.90949379 2485 Q15046 KARS Lysine--tRNA ligase yes yes 0 0 1 By MS/MS 2 0 1 1 65.784 62.031 3 0.01387 76882 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 41.378 34.65 5404500 0 0 5404500 0 0 0 0 0 0 0 0 0 0 0 0 11963 2485 10912 101693 81218 81218 1 EIDAWFTEK Unmodified 1137.5342 0.53424004 4979 Q9UKY1 ZHX1 Zinc fingers and homeoboxes protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 73.642 73.675 2 0.013737 85591 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 59.35 35.378 49336000 0 0 0 3661900 3243500 0 4491100 4493900 5397600 4554500 0 0 6272800 5391100 11830000 11964 4979 10913 101694;101695;101696;101697;101698;101699;101700;101701;101702 81219;81220;81221;81222;81223 81222 5 EIDCLSPEAQK Unmodified 1288.5969 0.59691665 2661 Q32MZ4 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 38.503 38.356 2 0.014077 43019 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 53.683 45.362 30304000 0 0 0 5107700 6343700 7738000 6756600 0 4357600 0 0 0 0 0 0 11965 2661 10914 101703;101704;101705;101706;101707 81224;81225 81225 2 EIDDEANSYFQR Unmodified 1485.6372 0.63720156 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 54.99 55.122 2 2.7693E-08 62318 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 157.96 150.03 189720000 0 0 0 13218000 14588000 14915000 16879000 14299000 12127000 13997000 16679000 21419000 18891000 15747000 16961000 11966 19 10915 101708;101709;101710;101711;101712;101713;101714;101715;101716;101717;101718;101719 81226;81227;81228;81229;81230;81231;81232;81233;81234;81235;81236;81237;81238 81228 13 EIDDSVLGQTGPYR Unmodified 1548.742 0.74200098 346 O43615 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 64.82 64.903 2 2.451E-26 73530 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 152.07 113.77 199860000 0 0 0 8677000 12141000 14469000 15961000 15700000 14118000 0 21260000 32552000 23700000 18069000 23218000 11967 346 10916 101720;101721;101722;101723;101724;101725;101726;101727;101728;101729;101730 81239;81240;81241;81242;81243;81244;81245;81246;81247;81248;81249 81241 10 EIDDSVLGQTGPYRRPQR Unmodified 2086.0556 0.055564404 346 O43615 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 0 0 2 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 2 1 2 2 2 52.183 52.563 3;4 0.0079963 58472 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.926 24.535 96116000 0 0 0 0 0 0 0 0 3347700 4373600 19474000 13454000 15283000 12391000 27794000 11968 346 10917 101731;101732;101733;101734;101735;101736;101737;101738;101739;101740;101741 81250;81251;81252;81253 81250 4 EIDELIK Unmodified 858.46985 0.46984887 5146 Q9Y3A5 SBDS Ribosome maturation protein SBDS yes yes 0 0 0 By MS/MS 10 0 1 1 50.752 50.121 2 0.03138 57381 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 105.2 5.8166 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11969 5146 10918 101742 81254 81254 1 EIDELIPK Unmodified 955.52261 0.52261272 472 O75179 ANKRD17 Ankyrin repeat domain-containing protein 17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.56 1 1 13 2 1 1 1 1 1 2 1 1 1 1 1 1 71.097 70.396 2 0.014031 82501 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 71.141 12.947 134740000 0 40879000 0 4967100 5352800 7293200 6630800 6105800 5068300 8323700 8853600 9374600 9608300 8279000 14003000 11970 472 10919 101743;101744;101745;101746;101747;101748;101749;101750;101751;101752;101753;101754;101755;101756;101757 81255;81256;81257;81258;81259;81260;81261;81262 81261 8 EIDFDDVAAINPELLQLLPLHPK Unmodified 2599.3898 0.38975464 4043 Q99661 KIF2C Kinesin-like protein KIF2C yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 97.586 93.538 3 1.9426E-18 120562 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.535 68.492 13863000 13632000 230800 0 0 0 0 0 0 0 0 0 0 0 0 0 11971 4043 10920 101758;101759 81263 81263 1 EIDGGLETLR Unmodified 1101.5666 0.5666028 1394 P38117 ETFB Electron transfer flavoprotein subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 54.143 54.261 2 0.0019707 62748 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 87.308 40.241 32223000 0 0 0 3963600 2492500 0 3914400 0 0 0 4483300 6511500 0 3600700 7256900 11972 1394 10921 101760;101761;101762;101763;101764;101765;101766;101767;101768;101769 81264;81265;81266;81267;81268;81269;81270;81271;81272;81273 81272 10 EIDIYANLSDEK Unmodified 1408.6722 0.67219008 2948 Q6PH81 C16orf87 UPF0547 protein C16orf87 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 75.261 70.321 2 1.6196E-05 89878 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 109.42 70.397 40063000 0 40063000 0 0 0 0 0 0 0 0 0 0 0 0 0 11973 2948 10922 101770;101771 81274;81275 81275 2 EIDLELLQDLMEVDIDPLDIDLEK Unmodified 2825.4144 0.41437399 4584 Q9NR09 BIRC6 Baculoviral IAP repeat-containing protein 6 yes yes 0 0 0 By MS/MS 2 0 1 1 105.16 97.031 3 0.0001733 124587 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.39 44.278 5435700 5435700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11974 4584 10923 101772 81276 81276 1 EIDLESIFSLNPDLVPDEEIEPSPETPPPPASSAK Unmodified 3758.8302 0.83021345 116 O00139 KIF2A Kinesin-like protein KIF2A yes yes 0 0 0 By MS/MS 2 0 1 1 100.16 92.034 3 0.0007567 118599 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 27.454 19.187 18907000 18907000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11975 116 10924 101773 81277 81277 1 EIDLFQAR Unmodified 990.51345 0.51344502 4743 Q9NYJ8 TAB2 TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 68.68 68.753 2 0.029645 78988 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 56.011 27.904 4745000 0 0 0 0 0 2205900 0 2539100 0 0 0 0 0 0 0 11976 4743 10925 101774;101775 81278 81278 1 EIDLLLGQTDDTR Unmodified 1487.7468 0.74675201 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 77.862 77.991 2 6.4213E-06 89285 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 113.63 94.651 15707000 0 0 0 0 0 3313400 0 0 0 0 5606600 6787100 0 0 0 11977 528 10926 101776;101777;101778;101779;101780 81279;81280;81281;81282;81283 81282 5 EIDMLLK Unmodified 860.46774 0.46774038 2696 Q53EL6 PDCD4 Programmed cell death protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 72.016 66.17 2 0.019189 84319 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.54 22.955 377410000 24898000 346270000 6239600 0 0 0 0 0 0 0 0 0 0 0 0 11978 2696 10927 101781;101782;101783 81284;81285 81284 2 EIDPTSIPTAIK Unmodified 1283.6973 0.69728262 3886 Q96IZ7 RSRC1 Serine/Arginine-related protein 53 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 71.933 72.023 2 0.01397 82801 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 43.77 26.53 87090000 0 0 0 0 10633000 9642800 11018000 9475100 7583600 0 13111000 16868000 8759900 0 0 11979 3886 10928 101784;101785;101786;101787;101788;101789;101790;101791 81286;81287;81288;81289;81290 81288 5 EIDTDSTSQGESK Unmodified 1395.6001 0.60014735 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 10.681 10.803 2 1.7551E-08 9717 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 127.42 97.169 61309000 0 0 0 4023600 3635500 5531400 7196300 0 4241900 6996300 5741300 0 8161400 6055300 9725700 11980 1601 10929 101792;101793;101794;101795;101796;101797;101798;101799;101800;101801;101802;101803 81291;81292;81293;81294;81295;81296;81297;81298;81299;81300;81301;81302 81293 12 EIDVDAVASDGVVAAIAISEHVENAGVHSGDATLVTPPQDITAK Unmodified 4381.1925 0.19251798 1224 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 100.11 93.51 4;5 0 119160 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 262.38 257.39 107410000 107410000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11981 1224 10930 101804;101805;101806 81303;81304;81305;81306;81307 81306 5 EIDVIDVTR Unmodified 1058.5608 0.56078914 5053 Q9UPP1 PHF8 Histone lysine demethylase PHF8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 63.984 64.086 2 0.0077155 73283 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 71.692 34.134 48384000 0 0 0 0 4580000 8268600 7675500 0 0 8395100 7400300 7676000 0 4389000 0 11982 5053 10931 101807;101808;101809;101810;101811;101812;101813;101814;101815 81308;81309;81310;81311;81312;81313;81314;81315 81310 8 EIDVISIPSK Unmodified 1099.6125 0.61249036 4043 Q99661 KIF2C Kinesin-like protein KIF2C yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.53 2.94 1 2 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 71.727 70.863 2 0.0026457 81454 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 81.525 45.907 405860000 307740 199030000 0 10753000 14513000 21843000 15372000 16051000 15197000 20928000 19956000 0 19659000 19679000 32578000 11983 4043 10932 101816;101817;101818;101819;101820;101821;101822;101823;101824;101825;101826;101827;101828;101829;101830 81316;81317;81318;81319;81320;81321;81322;81323;81324;81325;81326;81327 81317 9 EIEADLER Unmodified 973.47164 0.47163978 3403 Q8NBT2 SPC24 Kinetochore protein Spc24 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 43.627 43.894 2 0.024817 49027 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 59.205 27.916 241580000 0 0 0 10300000 0 0 12449000 13079000 0 26031000 41209000 32259000 35754000 30523000 39977000 11984 3403 10933 101831;101832;101833;101834;101835;101836;101837;101838;101839 81328;81329 81328 2 EIEADLERQEK Unmodified 1358.6678 0.66777341 3403 Q8NBT2 SPC24 Kinetochore protein Spc24 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.24 3.75 5 1 11 2 3 1 1 1 1 1 1 1 1 1 1 1 1 33.368 31.721 2;3 1.7221E-08 41239 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.98 59.501 220450000 28987000 70917000 3375700 0 4725700 11693000 8697000 8126500 6403200 11298000 11791000 19072000 9057000 10486000 15820000 11985 3403 10934 101840;101841;101842;101843;101844;101845;101846;101847;101848;101849;101850;101851;101852;101853;101854;101855;101856 81330;81331;81332;81333;81334;81335;81336;81337;81338;81339;81340;81341;81342 81333 13 EIEAIHAILR Unmodified 1163.6663 0.66625727 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 1 2 2 2 2 2 2 2 2 2 2 68.791 68.929 2;3 0.0017361 78156 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.688 56.599 130530000 0 0 0 3692500 2192300 7542100 6491300 9729200 12361000 12850000 8926400 20979000 9594100 9211200 26961000 11986 2556 10935 101857;101858;101859;101860;101861;101862;101863;101864;101865;101866;101867;101868;101869;101870;101871;101872;101873;101874;101875;101876;101877;101878 81343;81344;81345;81346;81347;81348;81349;81350;81351;81352;81353;81354;81355;81356 81346 7 EIEALNFK Unmodified 962.5073 0.50729701 4580 Q9NQX4 MYO5C Unconventional myosin-Vc yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.43 2.06 1 13 1 1 1 1 1 1 1 1 1 1 1 1 2 61.891 61.597 2 0.0049677 79367 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.01 63.486 69598000 0 15731000 0 2319200 3641900 5109000 4515300 3699200 2908200 4986100 5698800 7545500 4164300 3817500 5462500 11987 4580 10936 101879;101880;101881;101882;101883;101884;101885;101886;101887;101888;101889;101890;101891;101892 81357;81358;81359;81360;81361;81362;81363;81364;81365;81366;81367;81368;81369 81360 13 EIECSIAGAHEK Unmodified 1342.6187 0.61871473 2881 Q6I9Y2 THOC7 THO complex subunit 7 homolog yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 8.5 3.01 1 1 8 2 1 2 1 2 2 26.965 26.088 2;3 0.0010299 27782 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 83 77.219 164810000 0 115960000 0 9220000 10223000 1451200 0 0 8584200 0 0 0 19368000 0 0 11988 2881 10937 101893;101894;101895;101896;101897;101898;101899;101900;101901;101902 81370;81371;81372;81373;81374;81375 81374 5 EIEDFDSLEALR Unmodified 1435.6831 0.68308912 1495 P46060 RANGAP1 Ran GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 81.224 81.328 2 0.033324 94069 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 50.353 36.66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11989 1495 10938 101903;101904 81376;81377 81376 2 EIEDFDSLEALRLEGNTVGVEAAR Unmodified 2632.298 0.2980391 1495 P46060 RANGAP1 Ran GTPase-activating protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 92.119 83.988 3 2.5E-24 108885 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.53 81.624 20724000 20724000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11990 1495 10939 101905 81378;81379 81379 2 EIEDFDSLEALRLEGNTVGVEAARVIAK Unmodified 3043.5826 0.5825938 1495 P46060 RANGAP1 Ran GTPase-activating protein 1 yes yes 0 0 2 By MS/MS 2.5 0.5 1 1 2 96.226 90.408 4 3.7737E-78 114694 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 129.27 123.37 198040000 198040000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11991 1495 10940 101906;101907 81380;81381 81381 2 EIEEAMK Oxidation (M) 864.38988 0.38988399 2115 Q05519 SRSF11 Serine/arginine-rich splicing factor 11 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.0145 7.1382 2 0.019641 5345 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 75.311 17.065 163250000 0 0 0 6476500 8105400 9452800 11185000 9115000 11905000 17609000 20493000 14971000 18077000 17992000 17869000 11992 2115 10941 101908;101909;101910;101911;101912;101913;101914;101915;101916;101917;101918;101919 81382;81383;81384;81385;81386;81387;81388;81389;81390 81388 3419 9 EIEEAPDIRK Unmodified 1198.6194 0.61936665 5228 Q9Y5B0 CTDP1 RNA polymerase II subunit A C-terminal domain phosphatase yes yes 0 0 1 By MS/MS 3 0 1 1 33.981 29.469 3 0.041383 36946 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 44.882 33.785 9987500 0 9987500 0 0 0 0 0 0 0 0 0 0 0 0 0 11993 5228 10942 101920 81391 81391 0 EIEELQSQAQALSQEGK Unmodified 1886.9222 0.92215019 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 65.718 65.041 2 2.1703E-182 80589 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 295.78 236.36 428530000 0 286610000 0 4518400 5201700 10371000 6795200 7355500 5114300 13977000 16230000 19830000 7763100 11785000 32975000 11994 2047 10943 101921;101922;101923;101924;101925;101926;101927;101928;101929;101930;101931;101932;101933;101934 81392;81393;81394;81395;81396;81397;81398;81399;81400;81401;81402;81403;81404;81405;81406;81407 81396 16 EIEEYIHK Unmodified 1059.5237 0.52367535 1451 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes yes 0 0 0 By MS/MS 10 0 1 1 34.64 34.948 2 0.047391 37515 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 47.849 23.876 3623200 0 0 0 0 0 0 0 0 0 0 0 0 0 3623200 0 11995 1451 10944 101935 81408 81408 1 EIEEYIHKPK Unmodified 1284.6714 0.67140222 1451 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 39.993 35.722 3 0.048863 44605 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 42.743 33.789 28485000 0 13179000 15306000 0 0 0 0 0 0 0 0 0 0 0 0 11996 1451 10945 101936;101937 81409 81409 1 EIEGEEIEIVLAKPPDK Unmodified 1908.0092 0.0091742879 322 O43390 HNRNPR Heterogeneous nuclear ribonucleoprotein R yes yes 0 0 1 By MS/MS By MS/MS 2.67 0.471 1 2 2 1 84.103 79.089 3 7.5354E-19 100813 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 100.04 95.693 104860000 100950000 3905600 0 0 0 0 0 0 0 0 0 0 0 0 0 11997 322 10946 101938;101939;101940 81410;81411 81411 2 EIEGEEIEIVLAKPPDKK Unmodified 2036.1041 0.10413731 322 O43390 HNRNPR Heterogeneous nuclear ribonucleoprotein R yes yes 0 0 2 By MS/MS 2.33 0.471 2 1 3 81.306 74.632 3;4 0.00012406 96486 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.809 61.479 103210000 103210000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11998 322 10947 101941;101942;101943 81412;81413;81414 81413 3 EIEHNLSK Unmodified 968.49271 0.49270958 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 11.233 10.45 2 0.0012783 12995 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 166.3 77 255600000 16716000 124730000 16467000 6847000 5566700 7690800 8533500 7028500 7322300 7597500 0 9102400 11938000 15651000 10418000 11999 3676 10948 101944;101945;101946;101947;101948;101949;101950;101951;101952;101953;101954;101955;101956;101957;101958 81415;81416;81417;81418;81419;81420;81421;81422;81423 81421 9 EIEIDIEPTDK Unmodified 1300.6398 0.63982732 2588 Q15843 NEDD8 NEDD8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.14 3.87 5 2 7 2 3 2 1 1 1 1 1 1 1 69.761 67.329 2 3.2798E-09 87154 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 140.75 107.91 2102200000 467770000 1526700000 0 0 0 0 0 0 0 0 21220000 17379000 0 18416000 50687000 12000 2588 10949 101959;101960;101961;101962;101963;101964;101965;101966;101967;101968;101969;101970;101971;101972 81424;81425;81426;81427;81428;81429;81430;81431;81432;81433;81434;81435;81436;81437;81438;81439 81431 15 EIEILTQK Unmodified 972.54916 0.54916182 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 51.79 51.926 2 0.011827 58805 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 76.035 44.099 74688000 0 0 0 6074900 6163800 7325800 5473300 6142200 3444500 8962400 7904700 8631200 0 5992000 8573600 12001 2291 10950 101973;101974;101975;101976;101977;101978;101979;101980;101981;101982;101983 81440;81441;81442;81443;81444;81445 81441 6 EIELENDLK Unmodified 1101.5554 0.55536941 2582 Q15813 TBCE Tubulin-specific chaperone E yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 55.809 56.105 2 0.0050719 63299 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 84.498 39.777 62107000 0 0 0 0 0 7691900 5392900 0 0 8911800 7455300 8650900 5644300 6727000 11633000 12002 2582 10951 101984;101985;101986;101987;101988;101989;101990;101991 81446;81447;81448;81449;81450 81450 4 EIELGNEDYCIK Unmodified 1481.6708 0.67080988 413 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 73.158 64.962 2 0.0001361 75860 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 96.342 66.869 3916000 3916000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12003 413 10952 101992;101993;101994;101995;101996 81451;81452;81453;81454;81455 81454 5 EIELLQAQK Unmodified 1070.5972 0.59717465 4580 Q9NQX4 MYO5C Unconventional myosin-Vc yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 56.001 56.099 2 0.0030679 63734 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 91.9 47.505 76203000 0 0 0 5084800 6169800 6434700 8221800 7188700 5771900 0 0 5702000 8555200 9835500 13239000 12004 4580 10953 101997;101998;101999;102000;102001;102002;102003;102004;102005;102006 81456;81457;81458;81459;81460;81461;81462;81463 81458 8 EIELQQQTIESLK Unmodified 1557.825 0.82500233 2429 Q14678 KANK1 KN motif and ankyrin repeat domain-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 76.897 72.06 2 1.2155E-10 90038 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 153.1 96.668 24189000 0 24189000 0 0 0 0 0 0 0 0 0 0 0 0 0 12005 2429 10954 102007 81464 81464 1 EIELTHR Unmodified 896.47158 0.4715802 323 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.697 20.9 2 0.020864 21466 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 107.67 40.33 422970000 0 0 0 25435000 19834000 22313000 33735000 23532000 18282000 32683000 50109000 45492000 52335000 40957000 58258000 12006 323 10955 102008;102009;102010;102011;102012;102013;102014;102015;102016;102017;102018;102019 81465;81466;81467;81468;81469;81470;81471;81472;81473;81474;81475;81476;81477 81474 13 EIEMASEERPPAQALEIMMGLK Oxidation (M) 2488.2012 0.20116729 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 1 1 By MS/MS 2 0 2 2 94.857 86.727 3 0.00037074 110016 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 59.163 37.765 31487000 31487000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12007 1226 10956 102020;102021 81478;81479;81480 81478 1810;1811 3 EIEMASEERPPAQALEIMMGLK Unmodified 2472.2063 0.20625267 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 0 1 By MS/MS 2 0 1 1 97.706 89.575 3 6.4803E-75 115586 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 145.75 138.13 54738000 54738000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12008 1226 10956 102022 81481 81481 1 EIEMINESEK Unmodified 1220.5595 0.55946851 3422 Q8NEB9 PIK3C3 Phosphatidylinositol 3-kinase catalytic subunit type 3 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 41.75 41.909 2 0.033081 45636 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 52.255 16.81 10502000 0 0 0 0 0 4444700 0 0 0 0 0 0 0 6057200 0 12009 3422 10957 102023;102024 81482;81483 81483 2 EIENEDMR Unmodified 1034.4339 0.43387407 417 O60610 DIAPH1 Protein diaphanous homolog 1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 17.168 17.349 2 0.0068947 17414 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 91.9 61.288 62291000 0 0 0 3565600 3909500 7056100 3354100 3867700 2554900 4901100 5208600 6559500 6950900 6297600 8065500 12010 417 10958 102025;102026;102027;102028;102029;102030;102031;102032;102033;102034;102035;102036 81484;81485;81486;81487;81488 81484 5 EIENGHIFTVNDQFTSK Unmodified 1977.9432 0.94321999 2330 Q13618 CUL3 Cullin-3 yes yes 0 0 0 By MS/MS 3 0 1 1 74.044 70.373 3 0.016904 84823 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 40.186 34.546 3607400 0 3607400 0 0 0 0 0 0 0 0 0 0 0 0 0 12011 2330 10959 102037 81489 81489 0 EIENSSPNR Unmodified 1044.4836 0.48360145 2792 Q5TAX3 ZCCHC11 Terminal uridylyltransferase 4 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching 10 0 8 1 1 1 1 1 1 1 1 7.7146 7.8023 2 0.024533 5906 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 50.607 31.876 9018900 0 0 0 439890 748510 795680 1593300 0 0 0 0 1308700 981760 1376800 1774300 12012 2792 10960 102038;102039;102040;102041;102042;102043;102044;102045 81490;81491 81490 2 EIEQKYDCGEEILITVLSAMTEEAAVAIK Unmodified 3252.6145 0.61454714 1949 P63241;Q6IS14 EIF5A;EIF5AL1 Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-1-like yes no 0 0 1 By MS/MS 2 0 1 1 106.35 98.219 3 9.9403E-79 126007 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 130.46 125.7 14935000 14935000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12013 1949 10961 102046 81492 81492 1 EIEQLQEK Unmodified 1015.5186 0.51858998 4316 Q9H081 MIS12 Protein MIS12 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 27.705 23.4 2 0.0025172 30798 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.13 8.6289 19004000 0 19004000 0 0 0 0 0 0 0 0 0 0 0 0 0 12014 4316 10962 102047 81493 81493 1 EIESEIDSEEELINK Unmodified 1775.8313 0.8312695 2415 Q14566 MCM6 DNA replication licensing factor MCM6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 7 3.69 3 3 9 3 3 1 1 1 1 1 2 1 1 73.818 71.735 2;3 0 85850 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 290.61 225.39 275540000 118690000 61593000 0 0 6152100 12897000 3741200 0 0 9734700 12909000 21405000 0 11857000 16569000 12015 2415 10963 102048;102049;102050;102051;102052;102053;102054;102055;102056;102057;102058;102059;102060;102061;102062 81494;81495;81496;81497;81498;81499;81500;81501;81502;81503 81499 9 EIESEIDSEEELINKK Unmodified 1903.9262 0.92623252 2415 Q14566 MCM6 DNA replication licensing factor MCM6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67.836 66.992 3 1.3113E-23 86955 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.507 75.088 207000000 73768000 36921000 0 3182000 3282700 8466600 3568200 4333900 5590400 7351000 12132000 11194000 5154200 8258300 23802000 12016 2415 10964 102063;102064;102065;102066;102067;102068;102069;102070;102071;102072;102073;102074;102075;102076 81504;81505;81506;81507;81508;81509;81510;81511;81512;81513;81514;81515;81516;81517 81510 14 EIESSPQYR Unmodified 1107.5197 0.51965261 3576 Q8WWM7 ATXN2L Ataxin-2-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.027 22.234 2 0.0034522 23359 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 94.302 54.301 215290000 0 0 0 10082000 8012200 14102000 17120000 13727000 12265000 21769000 22925000 30031000 26145000 16819000 22295000 12017 3576 10965 102077;102078;102079;102080;102081;102082;102083;102084;102085;102086;102087;102088 81518;81519;81520;81521;81522;81523;81524;81525;81526;81527;81528 81518 9 EIETLVEEK Unmodified 1088.5601 0.56012044 2663 Q32P28 LEPRE1 Prolyl 3-hydroxylase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.86 3.4 1 1 5 2 1 1 1 1 1 48.18 46.397 2 0.0033124 51822 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 93.429 19.812 269350000 0 251580000 0 0 0 0 0 0 0 0 0 5985600 0 2193900 9587600 12018 2663 10966 102089;102090;102091;102092;102093;102094;102095 81529;81530;81531;81532;81533;81534;81535 81534 6 EIETYHNLLEGGQEDFESSGAGK Unmodified 2509.1245 0.12449141 1354 P35527;CON__P35527 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.35 2.15 8 3 119 4 5 2 3 3 15 3 30 12 14 8 9 13 6 3 83.817 83.591 2;3 0 85396 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 254.26 251.37 + 41685000000 425080000 1374600000 125010000 1365800000 1319600000 2464800000 561160000 11305000000 3246600000 5282800000 2953400000 4149200000 2710100000 1565600000 2836400000 12019 1354 10967 102096;102097;102098;102099;102100;102101;102102;102103;102104;102105;102106;102107;102108;102109;102110;102111;102112;102113;102114;102115;102116;102117;102118;102119;102120;102121;102122;102123;102124;102125;102126;102127;102128;102129;102130;102131;102132;102133;102134;102135;102136;102137;102138;102139;102140;102141;102142;102143;102144;102145;102146;102147;102148;102149;102150;102151;102152;102153;102154;102155;102156;102157;102158;102159;102160;102161;102162;102163;102164;102165;102166;102167;102168;102169;102170;102171;102172;102173;102174;102175;102176;102177;102178;102179;102180;102181;102182;102183;102184;102185;102186;102187;102188;102189;102190;102191;102192;102193;102194;102195;102196;102197;102198;102199;102200;102201;102202;102203;102204;102205;102206;102207;102208;102209;102210;102211;102212;102213;102214;102215;102216;102217;102218;102219;102220;102221;102222;102223;102224;102225 81536;81537;81538;81539;81540;81541;81542;81543;81544;81545;81546;81547;81548;81549;81550;81551;81552;81553;81554;81555;81556;81557;81558;81559;81560;81561;81562;81563;81564;81565;81566;81567;81568;81569;81570;81571;81572;81573;81574;81575;81576;81577;81578;81579;81580;81581;81582;81583;81584;81585;81586;81587;81588;81589;81590;81591;81592;81593;81594;81595;81596;81597;81598;81599;81600;81601;81602;81603;81604;81605;81606;81607;81608;81609;81610;81611;81612;81613;81614;81615;81616;81617;81618;81619;81620;81621;81622;81623;81624;81625;81626;81627;81628;81629;81630;81631;81632;81633;81634;81635;81636;81637;81638;81639;81640;81641;81642;81643;81644;81645;81646;81647;81648;81649;81650;81651;81652;81653;81654;81655;81656;81657;81658;81659;81660;81661;81662;81663;81664;81665;81666;81667;81668;81669;81670;81671;81672;81673;81674;81675;81676;81677;81678;81679;81680;81681;81682;81683;81684;81685;81686;81687;81688;81689;81690 81560 145 EIEVEEVVGR Unmodified 1157.5928 0.59281755 318 O43318 MAP3K7 Mitogen-activated protein kinase kinase kinase 7 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 61.179 60.98 2 0.021915 69640 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 46.39 18.377 2685500 0 0 0 0 1101600 0 1583900 0 0 0 0 0 0 0 0 12020 318 10968 102226;102227 81691 81691 1 EIEVGGGRK Unmodified 943.50869 0.50869399 1871 P62081 RPS7 40S ribosomal protein S7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0.577 1 4 1 2 2 2 28.803 27.131 2 0.01827 15315 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 113.7 16.625 714800000 187620000 141980000 385190000 0 0 0 0 0 0 0 0 0 0 0 0 12021 1871 10969 102228;102229;102230;102231;102232;102233 81692;81693;81694;81695;81696 81695 3 EIEVLNK Unmodified 843.47018 0.47018322 4636 Q9NTK5 OLA1 Obg-like ATPase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 35.352 35.709 2 0.028147 38190 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.847 2.408 55544000 0 0 0 0 0 0 8128100 0 0 0 0 0 8554600 11615000 27246000 12022 4636 10970 102234;102235;102236;102237 81697;81698;81699;81700 81698 4 EIEVPDQYGTIR Unmodified 1418.7042 0.70415892 4505 Q9HC35 EML4 Echinoderm microtubule-associated protein-like 4 yes yes 0 0 0 By MS/MS 10 0 1 1 66.591 65.904 2 0.018396 76312 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 56.258 28.955 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12023 4505 10971 102238 81701 81701 1 EIEYEVVR Unmodified 1035.5237 0.52367535 1300;1224 P27708;P31327 CAD;CPS1 CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase;Carbamoyl-phosphate synthase [ammonia], mitochondrial no no 0 0 0 By MS/MS 10 0 1 1 47.066 47.798 2 0.048346 52851 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.789 37.296 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12024 1224;1300 10972 102239 81702 81702 1 EIEYVETVTSR Unmodified 1324.6511 0.65106071 4906 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 55.454 55.853 2 0.0024945 62687 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.111 51.002 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12025 4906 10973 102240;102241;102242 81703;81704;81705 81703 3 EIFAQLSR Unmodified 962.51853 0.5185304 4664 Q9NVC6 MED17 Mediator of RNA polymerase II transcription subunit 17 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 57.257 57.617 2 0.016961 65027 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 66.429 23.955 34798000 0 0 0 0 0 0 7903100 0 0 8823300 0 9119700 0 0 8951800 12026 4664 10974 102243;102244;102245;102246 81706;81707 81707 2 EIFDLIR Unmodified 904.50182 0.5018177 5160 Q9Y3D0 FAM96B Mitotic spindle-associated MMXD complex subunit MIP18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.231 81.29 2 0.024641 93554 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.386 30.086 102220000 0 0 0 3741200 4521400 8906400 4464500 5966800 5488300 7975500 9290100 11035000 11107000 8854700 20870000 12027 5160 10975 102247;102248;102249;102250;102251;102252;102253;102254;102255;102256;102257;102258 81708;81709 81708 2 EIFDRYGEEGLK Unmodified 1454.7042 0.70415892 1191 P25685 DNAJB1 DnaJ homolog subfamily B member 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 54.918 55.267 3 0.009864 61765 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 31.664 25.791 62266000 0 0 0 0 0 0 0 5220400 0 6646900 7929100 10809000 4935900 7899800 18825000 12028 1191 10976 102259;102260;102261;102262;102263;102264;102265 81710;81711;81712 81710 3 EIFDSRGNPTVEVDLFTSK Unmodified 2153.0641 0.064063405 827 P06733 ENO1 Alpha-enolase yes yes 0 0 1 By MS/MS 2 0 1 1 89.207 81.077 3 4.8094E-06 105330 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.123 48.562 34133000 34133000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12029 827 10977 102266 81713 81713 1 EIFEQPESVVNTMR Oxidation (M) 1693.7981 0.79813565 2125 Q06210 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 65.447 65.581 2 8.3974E-14 75114 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 112.13 86.689 123930000 0 0 0 8584600 0 13056000 14265000 0 0 13784000 15359000 23207000 0 18478000 17197000 12030 2125 10978 102267;102268;102269;102270;102271;102272;102273;102274 81714;81715;81716;81717;81718;81719;81720;81721;81722 81714 3428 8 EIFEQPESVVNTMR Unmodified 1677.8032 0.80322103 2125 Q06210 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 76.472 76.679 2 0.00013329 88492 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 99.215 82.19 49072000 0 0 0 0 0 0 0 0 0 0 0 0 0 14421000 34651000 12031 2125 10978 102275;102276;102277;102278;102279;102280 81723;81724;81725;81726;81727;81728 81723 6 EIFETLIK Unmodified 991.559 0.55899823 588 O94808 GFPT2 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 78.472 77.897 2 0.017826 89063 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 65.038 37.513 57741000 0 26999000 0 0 0 4621000 0 0 0 4559200 5279200 8289900 2968900 5024300 0 12032 588 10979 102281;102282;102283;102284;102285;102286;102287 81729;81730;81731;81732 81731 4 EIFFHYSEFK Unmodified 1345.6343 0.63428844 517 O75534 CSDE1 Cold shock domain-containing protein E1 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 74.703 74.9 3 0.031661 85746 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.681 31.804 22798000 0 0 0 0 0 0 0 0 2711000 0 0 3532100 1584300 1746500 13224000 12033 517 10980 102288;102289;102290;102291;102292 81733 81733 1 EIFFHYSEFSGDVDSLELGDMVEYSLSK Unmodified 3242.4642 0.46417773 517 O75534 CSDE1 Cold shock domain-containing protein E1 yes yes 0 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 3 1 98.909 92.784 3;4 1.3753E-104 98485 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 144.26 138.54 100280000 58237000 42038000 0 0 0 0 0 0 0 0 0 0 0 0 0 12034 517 10981 102293;102294;102295;102296 81734;81735;81736;81737 81735 4 EIFFHYSEFSGDVDSLELGDMVEYSLSK Oxidation (M) 3258.4591 0.45909235 517 O75534 CSDE1 Cold shock domain-containing protein E1 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 97.352 89.221 3 1.0911E-202 115197 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 212.38 206.28 88673000 88673000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12035 517 10981 102297;102298 81738;81739;81740 81739 676 3 EIFGLYGQTTGK Unmodified 1312.6663 0.66631685 4589 Q9NR31 SAR1A GTP-binding protein SAR1a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 69.678 69.712 2 2.077E-06 79909 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 113.93 91.689 84810000 0 0 0 4544200 3783900 5494500 6559000 4796100 3263300 10738000 14204000 0 7946500 0 23481000 12036 4589 10982 102299;102300;102301;102302;102303;102304;102305;102306;102307;102308;102309 81741;81742;81743;81744;81745;81746;81747;81748;81749;81750 81745 10 EIFGRIQDK Unmodified 1104.5928 0.59275797 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS 2 0 1 1 48.751 40.925 2 0.039755 56993 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 121.09 37.339 13094000 13094000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12037 2047 10983 102310 81751 81751 0 EIFLRELISNASDALDK Unmodified 1933.0157 0.015656649 862;1002 P08238;P14625 HSP90AB1;HSP90B1 Heat shock protein HSP 90-beta;Endoplasmin no no 0 0 1 By MS/MS By MS/MS By MS/MS 2.22 0.629 1 5 3 5 3 1 99.078 95.387 2;3 2.6762E-117 116269 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 179.46 157.86 1026800000 552130000 464970000 9741800 0 0 0 0 0 0 0 0 0 0 0 0 12038 862;1002 10984 102311;102312;102313;102314;102315;102316;102317;102318;102319 81752;81753;81754;81755;81756;81757;81758;81759;81760;81761 81759 8 EIFLRELISNSSDALDK Unmodified 1949.0106 0.010571271 850 P07900;Q14568 HSP90AA1;HSP90AA2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2 yes no 0 0 1 By MS/MS By MS/MS By MS/MS 2.31 0.606 1 7 5 7 5 1 94.877 90.562 2;3 3.367E-75 105863 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 144.97 135.81 927750000 611780000 310930000 5038500 0 0 0 0 0 0 0 0 0 0 0 0 12039 850 10985 102320;102321;102322;102323;102324;102325;102326;102327;102328;102329;102330;102331;102332 81762;81763;81764;81765;81766;81767;81768;81769;81770;81771;81772;81773;81774;81775;81776 81766 14 EIFNFVLK Unmodified 1008.5644 0.56441796 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 85.329 85.396 2 0.011473 98510 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.847 66.709 346970000 0 0 0 6986600 12634000 33401000 18106000 18351000 24821000 29662000 24739000 42810000 20389000 31604000 83470000 12040 1986 10986 102333;102334;102335;102336;102337;102338;102339;102340;102341;102342;102343;102344 81777;81778;81779;81780;81781;81782;81783;81784;81785;81786;81787;81788 81780 12 EIFPDIK Unmodified 860.46437 0.46436956 1536 P48382 RFX5 DNA-binding protein RFX5 yes yes 0 0 0 By MS/MS 10 0 1 1 65.406 65.559 2 0.048847 75341 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 64.803 14.684 20196000 0 0 0 0 0 0 0 0 0 0 0 0 20196000 0 0 12041 1536 10987 102345 81789 81789 1 EIFPSINTEETNVK Unmodified 1619.8043 0.80426689 3593 Q8WXI7 MUC16 Mucin-16 yes yes 0 0 0 By MS/MS 2 0 1 1 77.759 72.984 2 0.04563 91049 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 48.004 17.114 13182000 0 13182000 0 0 0 0 0 0 0 0 0 0 0 0 0 12042 3593 10988 102346 81790 81790 1 EIFQTTVPYMVER Oxidation (M) 1627.7916 0.79159371 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 75.241 75.274 2 0.0036731 86837 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 48.741 28.534 36372000 0 0 0 2000800 3028200 4255400 0 3804400 2807500 4107000 0 4943000 3261600 3067900 5096000 12043 5189 10989 102347;102348;102349;102350;102351;102352;102353;102354;102355;102356 81791;81792;81793 81793 6579 3 EIFSGLPELK Unmodified 1131.6176 0.61757574 3513 Q8TEA1 NSUN6 Putative methyltransferase NSUN6 yes yes 0 0 0 By MS/MS 2 0 1 1 87.174 82.365 2 0.0054445 102317 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.67 31.702 44223000 0 44223000 0 0 0 0 0 0 0 0 0 0 0 0 0 12044 3513 10990 102357 81794 81794 1 EIGAAVQALK Unmodified 998.57605 0.57604528 4494 Q9HB19 PLEKHA2 Pleckstrin homology domain-containing family A member 2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 55.843 50.492 2 0.0044116 62279 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 89.752 47.86 66795000 0 66795000 0 0 0 0 0 0 0 0 0 0 0 0 0 12045 4494 10991 102358;102359 81795;81796 81796 2 EIGADLVLQISK Unmodified 1284.7289 0.7289171 2045 Q00796 SORD Sorbitol dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS 2.29 0.452 5 2 2 5 88.476 83.538 2 2.8802E-05 103900 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.52 70.254 198990000 62037000 136960000 0 0 0 0 0 0 0 0 0 0 0 0 0 12046 2045 10992 102360;102361;102362;102363;102364;102365;102366 81797;81798;81799;81800;81801;81802;81803;81804;81805 81797 9 EIGDGEEGSGQRPEEIPMDLTVVK Unmodified 2584.2327 0.23266165 4698 Q9NWK9 ZNHIT6 Box C/D snoRNA protein 1 yes yes 0 0 1 By MS/MS 3 0 1 1 82.026 78.753 3 0.0037188 94415 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 33.074 21.117 2039900 0 2039900 0 0 0 0 0 0 0 0 0 0 0 0 0 12047 4698 10993 102367 81806 81806 1 EIGDVENWAR Unmodified 1187.5571 0.55710075 1987 P78537 BLOC1S1 Biogenesis of lysosome-related organelles complex 1 subunit 1 yes yes 0 0 0 By MS/MS 10 0 1 1 60.826 61.406 2 0.011057 69371 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.069 56.98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12048 1987 10994 102368 81807 81807 1 EIGELTQLK Unmodified 1029.5706 0.57062555 2530 Q15404 RSU1 Ras suppressor protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 3 1 1 1 1 1 1 1 1 1 1 1 1 57.045 55.837 1;2 0.0020039 71727 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 149.57 39.263 671240000 0 497040000 10308000 0 8206000 15150000 11552000 12849000 7309700 17830000 16913000 20308000 13535000 15346000 24890000 12049 2530 10995 102369;102370;102371;102372;102373;102374;102375;102376;102377;102378;102379;102380;102381;102382;102383 81808;81809;81810;81811;81812;81813;81814;81815;81816;81817;81818;81819;81820;81821 81814 10 EIGFINYYGMQR Oxidation (M) 1505.6973 0.6972994 3950 Q96PZ0 PUS7 Pseudouridylate synthase 7 homolog yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 75.388 75.611 2 0.00078588 86745 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.819 71.306 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12050 3950 10996 102384;102385 81822;81823 81822 5435 2 EIGGDVQK Unmodified 844.42905 0.42904669 2055 Q01518 CAP1 Adenylyl cyclase-associated protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.36 3.15 2 1 11 1 2 1 1 1 1 1 2 1 1 1 1 11.952 11.365 2 0.015996 10346 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 67.981 23.45 1308900000 125110000 1042800000 0 0 0 13190000 9018400 5348800 6121000 12925000 16853000 20595000 8930000 12345000 35626000 12051 2055 10997 102386;102387;102388;102389;102390;102391;102392;102393;102394;102395;102396;102397;102398;102399 81824;81825;81826;81827;81828;81829;81830;81831;81832 81832 6 EIGGLAQVNK Unmodified 1027.5662 0.56620887 3444 Q8NFD5 ARID1B AT-rich interactive domain-containing protein 1B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 39.44 39.478 2 0.0073938 42293 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.573 25.731 43447000 0 0 0 4372700 5047300 5750700 5064300 3878800 2421500 5138800 0 0 0 0 11773000 12052 3444 10998 102400;102401;102402;102403;102404;102405;102406;102407 81833 81833 1 EIGGLTQVNK Unmodified 1057.5768 0.57677356 183 O14497 ARID1A AT-rich interactive domain-containing protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 38.193 37.924 2 0.0018227 42271 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 88.37 23.949 193700000 0 120060000 0 4977200 3350300 6853200 7341900 4417800 4395000 7943300 5734300 7439900 6897000 0 14290000 12053 183 10999 102408;102409;102410;102411;102412;102413;102414;102415;102416;102417;102418;102419;102420 81834;81835;81836;81837;81838;81839;81840;81841;81842;81843;81844 81836 11 EIGLLSEEVELYGETK Unmodified 1807.9091 0.90912589 953 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS 2 0 1 1 91.876 83.745 2 8.5045E-07 108575 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.39 85.851 8568900 8568900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12054 953 11000 102421 81845 81845 1 EIGLWFHPEELVDYTSCAQNWIYE Unmodified 2998.3484 0.34836011 1022 P15531 NME1 Nucleoside diphosphate kinase A yes yes 0 0 0 By MS/MS By MS/MS 2.4 0.49 3 2 3 2 100.39 95.441 3 2.5237E-33 119510 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.057 82.746 285210000 271340000 13870000 0 0 0 0 0 0 0 0 0 0 0 0 0 12055 1022 11001 102422;102423;102424;102425;102426 81846;81847;81848;81849 81849 4 EIGNIISDAMK Oxidation (M) 1205.5962 0.59618837 930 P10809 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.74 3.54 7 2 22 3 4 2 1 2 2 2 1 2 2 2 2 2 2 2 58.276 57.11 2 1.4311E-07 65533 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 145.46 108.76 2794900000 16949000 1237100000 22673000 50133000 103520000 179160000 136030000 70402000 111250000 155560000 145770000 162820000 139300000 102570000 161640000 12056 930 11002 102427;102428;102429;102430;102431;102432;102433;102434;102435;102436;102437;102438;102439;102440;102441;102442;102443;102444;102445;102446;102447;102448;102449;102450;102451;102452;102453;102454;102455;102456;102457 81850;81851;81852;81853;81854;81855;81856;81857;81858;81859;81860;81861;81862;81863;81864;81865;81866;81867;81868;81869;81870;81871;81872;81873;81874;81875;81876;81877;81878;81879;81880;81881;81882;81883 81877 1199 32 EIGNIISDAMK Unmodified 1189.6013 0.60127375 930 P10809 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 76.633 75.502 2 1.9715E-05 87204 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 128.6 84.155 2986900000 46383000 1700800000 22533000 46334000 55059000 90262000 65100000 100650000 63968000 114430000 121090000 126750000 76775000 102480000 254270000 12057 930 11002 102458;102459;102460;102461;102462;102463;102464;102465;102466;102467;102468;102469;102470;102471;102472;102473 81884;81885;81886;81887;81888;81889;81890;81891;81892;81893;81894;81895;81896;81897;81898;81899;81900;81901;81902;81903;81904;81905;81906;81907;81908 81889 25 EIGNIISDAMKK Unmodified 1317.6962 0.69623677 930 P10809 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 0 0 1 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 68.395 68.441 3 0.0052211 77680 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.629 36.596 36892000 0 0 0 2175700 1954200 0 2265400 4705100 0 2912400 5973800 0 3171200 4011000 9723100 12058 930 11003 102474;102475;102476;102477;102478;102479;102480;102481;102482 81909;81910 81909 2 EIGQSVDEVEK Unmodified 1231.5932 0.59321148 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.344 33.529 2 8.3263E-16 36454 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 163.32 104.34 203990000 0 0 0 9066000 7164600 20771000 11696000 9553500 7549500 21225000 28435000 23995000 17109000 18730000 28697000 12059 2047 11004 102483;102484;102485;102486;102487;102488;102489;102490;102491;102492;102493;102494 81911;81912;81913;81914;81915;81916;81917;81918;81919;81920;81921 81916 10 EIGSTMSGRK Unmodified 1064.5284 0.52844316 151 O00422 SAP18 Histone deacetylase complex subunit SAP18 yes yes 0 0 1 By MS/MS 2 0 1 1 14.309 10.261 2 0.011442 15401 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.948 60.391 93074000 93074000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12060 151 11005 102495 81922 81922 1 EIGVQNVK Unmodified 885.49198 0.4919813 992 P13984 GTF2F2 General transcription factor IIF subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.57 3.96 3 4 1 1 1 1 1 1 1 27.955 26.175 2 0.018796 33428 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.029 40.286 476490000 35445000 351310000 1801100 18303000 0 0 0 24452000 17332000 0 0 0 0 0 27839000 12061 992 11006 102496;102497;102498;102499;102500;102501;102502 81923;81924;81925;81926;81927 81923 4 EIGWTDVGGWTGQGGSILGTK Unmodified 2118.0382 0.038183005 2064 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 7 3.69 1 1 3 2 1 1 1 90.134 88.6 2 1.8188E-08 109608 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.83 84.615 38093000 0 30465000 0 0 0 0 0 0 0 1853400 1287800 0 0 0 4486900 12062 2064 11007 102503;102504;102505;102506;102507 81928;81929;81930 81929 3 EIHDGLDFYYSSK Unmodified 1572.7096 0.70963822 3790 Q96D46 NMD3 60S ribosomal export protein NMD3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 72.27 66.418 3 0.00019385 87508 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.766 89.044 19467000 17144000 0 2322200 0 0 0 0 0 0 0 0 0 0 0 0 12063 3790 11008 102508;102509;102510 81931;81932 81932 2 EIHTVPDMGK Oxidation (M) 1141.5438 0.54375887 2509 Q15257 PPP2R4 Serine/threonine-protein phosphatase 2A activator yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 19.989 15.839 2 0.00035045 21002 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.81 59.029 30700000 3905600 26794000 0 0 0 0 0 0 0 0 0 0 0 0 0 12064 2509 11009 102511;102512 81933 81933 4129 1 EIHTVPDMGK Unmodified 1125.5488 0.54884425 2509 Q15257 PPP2R4 Serine/threonine-protein phosphatase 2A activator yes yes 0 0 0 By MS/MS 2 0 1 1 36.795 31.88 2 9.549E-13 41809 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 182.29 148.34 72371000 0 72371000 0 0 0 0 0 0 0 0 0 0 0 0 0 12065 2509 11009 102513 81934;81935 81935 2 EIIAEYDTQVK Unmodified 1307.6609 0.66089712 451 O75044;P0DMP2;P0DJJ0 SRGAP2;SRGAP2B;SRGAP2C SLIT-ROBO Rho GTPase-activating protein 2;SLIT-ROBO Rho GTPase-activating protein 2B;SLIT-ROBO Rho GTPase-activating protein 2C yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.67 2.98 1 5 1 1 1 1 1 1 54.145 52.91 2 0.00045815 67063 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.42 13.158 47677000 0 29432000 0 2868100 2747600 0 0 4424000 0 0 0 0 0 0 8204800 12066 451 11010 102514;102515;102516;102517;102518;102519 81936;81937;81938;81939;81940;81941;81942;81943 81938 8 EIICEQAAIK Unmodified 1173.6064 0.60635913 3733 Q96A65 EXOC4 Exocyst complex component 4 yes yes 0 0 0 By MS/MS 2 0 1 1 50.911 45.165 2 0.046445 58580 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 52.867 12.865 17693000 0 17693000 0 0 0 0 0 0 0 0 0 0 0 0 0 12067 3733 11011 102520 81944 81944 1 EIIDLVLDR Unmodified 1084.6128 0.61282471 1961;3031;4093 P68363;Q71U36;Q9BQE3 TUBA1B;TUBA1A;TUBA1C Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.96 2.69 3 20 1 1 1 1 1 1 1 2 1 2 1 3 1 3 3 85.539 85.625 2 2.0454E-09 98356 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 163.99 106.7 7018400000 5496600 2529300 1195200 158980000 306640000 678120000 355490000 367520000 542980000 820860000 666090000 657180000 460320000 621610000 1373400000 12068 1961;3031;4093 11012 102521;102522;102523;102524;102525;102526;102527;102528;102529;102530;102531;102532;102533;102534;102535;102536;102537;102538;102539;102540;102541;102542;102543 81945;81946;81947;81948;81949;81950;81951;81952;81953;81954;81955;81956;81957;81958;81959;81960;81961;81962;81963;81964;81965;81966;81967;81968;81969;81970;81971;81972;81973;81974;81975;81976;81977;81978;81979;81980;81981;81982;81983;81984;81985;81986;81987;81988;81989;81990;81991;81992;81993 81991 49 EIIDPVLDR Unmodified 1068.5815 0.58152458 1962 P68366 TUBA4A Tubulin alpha-4A chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.482 66.566 2 0.0031541 76104 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 92.439 36.429 2125900000 0 0 0 127580000 108820000 154700000 150400000 160340000 121520000 172830000 218590000 202070000 187320000 176350000 345380000 12069 1962 11013 102544;102545;102546;102547;102548;102549;102550;102551;102552;102553;102554;102555 81994;81995;81996;81997;81998;81999;82000;82001;82002;82003;82004;82005;82006;82007;82008;82009 82008 15 EIIEGCIR Unmodified 988.50117 0.50116577 4393 Q9H4A3;Q96J92 WNK1;WNK4 Serine/threonine-protein kinase WNK1;Serine/threonine-protein kinase WNK4 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.166 42.343 2 0.0068357 47234 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 94.662 38.541 226790000 0 0 0 9829800 5799400 15375000 9255600 8698100 14589000 20155000 23804000 35914000 35525000 19281000 28563000 12070 4393 11014 102556;102557;102558;102559;102560;102561;102562;102563;102564;102565;102566;102567 82010;82011;82012;82013;82014;82015;82016 82015 7 EIIEHGIELFNK Unmodified 1440.7613 0.76127986 5276 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 81.189 73.058 3 0.01014 95823 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.948 41.607 13761000 13761000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12071 5276 11015 102568 82017 82017 1 EIIELLFHKMTDDPMNNK Unmodified 2187.0704 0.070411111 1696 P52735 VAV2 Guanine nucleotide exchange factor VAV2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.12 3.72 2 1 5 2 1 1 1 1 1 1 88.954 87.719 3 0.019044 105798 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 32.341 15.262 400820000 0 364200000 18144000 0 0 0 0 0 0 1728800 3341400 1593700 0 1798700 10007000 12072 1696 11016 102569;102570;102571;102572;102573;102574;102575;102576 82018;82019;82020;82021 82021 3 EIIELPLK Unmodified 953.57973 0.57973367 3388 Q8NB90 SPATA5 Spermatogenesis-associated protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.055 79.098 2 0.022922 91540 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 60.76 8.9727 31723000 0 0 0 1461400 1548300 2795600 2140800 2384900 2449100 3783300 3291600 4264100 4044400 3559500 0 12073 3388 11017 102577;102578;102579;102580;102581;102582;102583;102584;102585;102586;102587 82022;82023;82024 82024 3 EIIENLAK Unmodified 928.52295 0.52294707 2792 Q5TAX3 ZCCHC11 Terminal uridylyltransferase 4 yes yes 0 0 0 By MS/MS By MS/MS 2.67 0.471 1 2 1 2 52.049 46.686 2 0.02517 60867 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.462 0.65297 38474000 250440 38223000 0 0 0 0 0 0 0 0 0 0 0 0 0 12074 2792 11018 102588;102589;102590 82025 82025 1 EIIEQGIDLFNK Unmodified 1417.7453 0.74529545 5277 Q9Y6D6 ARFGEF1 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 86.357 81.709 2 0.00061662 103737 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.89 60.196 69452000 8804600 58411000 2236600 0 0 0 0 0 0 0 0 0 0 0 0 12075 5277 11019 102591;102592;102593;102594 82026;82027;82028 82028 2 EIIEYYLR Unmodified 1097.5757 0.57571092 3609 Q92503 SEC14L1 SEC14-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.578 74.643 2 0.0067278 85914 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 98.418 63.526 237890000 0 0 0 7446600 10704000 20848000 13267000 22952000 17027000 20969000 21543000 36533000 16447000 21307000 28848000 12076 3609 11020 102595;102596;102597;102598;102599;102600;102601;102602;102603;102604;102605;102606 82029;82030;82031;82032;82033;82034;82035;82036;82037;82038;82039 82037 11 EIIGGTSESEPMLSHTVRK Unmodified 2070.0416 0.041553824 2835 Q5W0B1 RNF219 RING finger protein 219 yes yes 0 0 1 By MS/MS 2 0 1 1 62.386 54.13 3 0.00069078 73237 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.754 37.796 8940900 8940900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12077 2835 11021 102607 82040;82041 82041 2 EIIGGTSESEPMLSHTVRK Oxidation (M) 2086.0365 0.036468446 2835 Q5W0B1 RNF219 RING finger protein 219 yes yes 0 1 1 By MS/MS 2 0 1 1 52.779 44.764 3 0.0091133 61677 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.52 24.884 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12078 2835 11021 102608 82042 82042 4500 1 EIIGSLSNAIK Unmodified 1143.6499 0.6499385 2174 Q0JRZ9 FCHO2 F-BAR domain only protein 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 75.423 71.528 2 0.0052522 89500 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.309 27.51 47321000 0 45125000 2196300 0 0 0 0 0 0 0 0 0 0 0 0 12079 2174 11022 102609;102610 82043 82043 1 EIIHELEK Unmodified 1009.5444 0.5444108 4906 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 9 2.65 1 7 1 1 1 1 1 1 1 1 35.142 34.911 2 0.02313 37403 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 60.589 18.75 31814000 0 0 8465000 0 614100 0 1967600 2204000 0 4557800 0 4039400 0 3061400 6905200 12080 4906 11023 102611;102612;102613;102614;102615;102616;102617;102618 82044;82045;82046 82046 2 EIIIEERPGQELTDVNGVR Unmodified 2166.1281 0.12806065 4172 Q9BV20 MRI1 Methylthioribose-1-phosphate isomerase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 72.845 73.052 3 1.2282E-42 83562 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 124.26 109.17 64227000 0 0 0 0 0 6783600 0 0 0 0 13223000 8638100 0 7293400 28288000 12081 4172 11024 102619;102620;102621;102622;102623 82047;82048;82049;82050 82047 4 EIIINAVR Unmodified 926.55492 0.5549159 1301 P31350 RRM2 Ribonucleoside-diphosphate reductase subunit M2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 54.896 54.985 2 0.038617 62111 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 50.966 28.835 152620000 0 0 0 10238000 8373100 11312000 10559000 12844000 8828600 16627000 16226000 0 11484000 14474000 31655000 12082 1301 11025 102624;102625;102626;102627;102628;102629;102630;102631;102632;102633;102634 82051 82051 1 EIILQGLK Unmodified 912.56442 0.56441796 5110 Q9Y2L1 DIS3 Exosome complex exonuclease RRP44 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66.762 66.185 2 0.0093302 85532 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.19 29.827 470880000 0 313210000 9828300 7494800 6023600 18257000 10235000 7103800 6321100 15156000 13156000 15306000 9895300 14550000 24335000 12083 5110 11026 102635;102636;102637;102638;102639;102640;102641;102642;102643;102644;102645;102646;102647;102648 82052;82053;82054;82055;82056;82057;82058;82059;82060;82061;82062;82063 82054 12 EIILVDDYSNDPEDGALLGK Unmodified 2175.0583 0.058309325 2177 Q10471 GALNT2 Polypeptide N-acetylgalactosaminyltransferase 2;Polypeptide N-acetylgalactosaminyltransferase 2 soluble form yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 1 1 6 1 1 1 1 1 1 1 1 85.937 84.58 2 7.6841E-47 98504 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 141.32 127.91 43904000 9809000 3031700 0 0 2113600 0 0 0 0 5745200 5747400 6280700 0 2604400 8572400 12084 2177 11027 102649;102650;102651;102652;102653;102654;102655;102656 82064;82065;82066;82067;82068;82069;82070;82071 82066 8 EIINITPLGSSELK Unmodified 1512.8399 0.83992412 2487 Q15051 IQCB1 IQ calmodulin-binding motif-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.4 3.2 1 4 1 1 1 1 1 83.486 82.55 2 0.001326 95663 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 70.17 43.572 24455000 0 17546000 0 0 1543000 2000600 1575800 1790000 0 0 0 0 0 0 0 12085 2487 11028 102657;102658;102659;102660;102661 82072;82073;82074;82075 82075 4 EIINQQR Unmodified 899.48248 0.48247924 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 14.756 14.952 2 0.019213 14643 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 110.54 38.54 93949000 0 0 0 0 4520100 7293100 6048800 7203300 4769600 8716800 9175400 11775000 12426000 8648900 13372000 12086 1364 11029 102662;102663;102664;102665;102666;102667;102668;102669;102670;102671;102672 82076;82077;82078;82079;82080 82079 5 EIINTYTEAVQTVDPFK Unmodified 1966.9888 0.9887732 4521 Q9HCS7 XAB2 Pre-mRNA-splicing factor SYF1 yes yes 0 0 0 By MS/MS 10 0 1 1 88.98 89.123 2 0.00036836 103182 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.624 59.961 2544400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2544400 12087 4521 11030 102673 82081 82081 1 EIIPTSEFINSK Unmodified 1376.7187 0.71874635 2424 Q14669 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 9.42 1.93 1 11 1 1 1 1 1 1 1 1 1 1 1 1 75.826 75.537 2 0.00043532 87184 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 79.974 61.534 56079000 0 2545900 0 3788100 4281400 6090800 5225100 6190700 0 5992700 6414100 6309300 4738000 4503400 0 12088 2424 11031 102674;102675;102676;102677;102678;102679;102680;102681;102682;102683;102684;102685 82082;82083;82084;82085;82086;82087;82088;82089;82090;82091;82092 82088 11 EIISHISQHGGK Unmodified 1304.6837 0.68369824 28 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 2 1 1 1 1 1 1 1 22.637 21.356 2;3 0.00011676 32704 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 103.26 72.182 180100000 133330000 0 0 3468000 1548200 14775000 3314300 0 0 0 0 10192000 0 0 13475000 12089 28 11032 102686;102687;102688;102689;102690;102691;102692;102693;102694 82093;82094;82095;82096;82097;82098 82096 5 EIISNLAK Unmodified 886.51238 0.51238239 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.109 43.284 2 0.0061841 46987 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 103.02 12.311 1268200000 0 0 0 57934000 68459000 71371000 91250000 84110000 68004000 108610000 132970000 160970000 126690000 142520000 155350000 12090 516 11033 102695;102696;102697;102698;102699;102700;102701;102702;102703;102704;102705;102706 82099;82100;82101;82102;82103;82104;82105;82106;82107;82108;82109 82101 9 EIISSASVVGLK Unmodified 1201.6918 0.69180331 3170 Q86VP6 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 70.475 69.719 2 0.0022157 80128 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 80.755 54.153 431730000 0 318220000 3636300 16617000 0 16324000 4208900 5158500 3909500 12091000 10198000 7055100 5295800 7234200 21775000 12091 3170 11034 102707;102708;102709;102710;102711;102712;102713;102714;102715;102716;102717;102718;102719;102720 82110;82111;82112 82110 2 EIISYDVK Unmodified 965.50696 0.50696266 3450 Q8NFW8 CMAS N-acylneuraminate cytidylyltransferase yes yes 0 0 0 By MS/MS 3 0 1 1 52.742 47.847 2 0.045356 59410 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 68.422 39.083 1515400 0 1515400 0 0 0 0 0 0 0 0 0 0 0 0 0 12092 3450 11035 102721 82113 82113 1 EIITLAPSTMK Unmodified 1202.6581 0.65806035 2711 Q562R1 ACTBL2 Beta-actin-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 2 1 1 1 78.38 78.449 2 0.01492 90582 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 54.416 26.018 145930000 0 0 0 8813700 8382700 9004100 5710500 7515300 5070500 12996000 17315000 28341000 8925600 13630000 20225000 12093 2711 11036 102722;102723;102724;102725;102726;102727;102728;102729;102730;102731;102732;102733;102734 82114;82115;82116;82117;82118;82119 82115 6 EIITNGVVK Unmodified 971.56515 0.56514624 3123 Q7Z7F0 KIAA0907 UPF0469 protein KIAA0907 yes yes 0 0 0 By MS/MS 2 0 1 1 46.136 40.689 2 0.0076408 53023 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.904 45.349 57210000 0 57210000 0 0 0 0 0 0 0 0 0 0 0 0 0 12094 3123 11037 102735 82120 82120 1 EIIYTLK Unmodified 878.51132 0.51131975 4126 Q9BSJ2 TUBGCP2 Gamma-tubulin complex component 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 54.738 54.907 2 0.048847 62357 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 64.803 28.216 92117000 0 0 0 5453200 0 8672200 6808000 9480600 6023100 11579000 0 10998000 9610100 10267000 13226000 12095 4126 11038 102736;102737;102738;102739;102740;102741;102742;102743;102744;102745 82121 82121 1 EIKEEPKEEEMTEEEK Unmodified 2005.9038 0.90378252 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 26.404 25.514 3;4 4.8801E-59 25907 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 176.33 167.15 568850000 50999000 5323100 0 34167000 36620000 11425000 62281000 45913000 12628000 36520000 43298000 71646000 32897000 30016000 95114000 12096 213 11039 102746;102747;102748;102749;102750;102751;102752;102753;102754;102755;102756;102757;102758;102759;102760 82122;82123;82124;82125;82126;82127;82128;82129;82130;82131;82132;82133;82134;82135;82136;82137;82138;82139;82140;82141;82142;82143;82144;82145;82146;82147;82148 82128 27 EIKEEPKEEEMTEEEK Oxidation (M) 2021.8987 0.89869714 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 1 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 2 1 1 1 2 2 1 2 2 2 1 1 15.12 15.312 3;4 8.0303E-28 14221 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 137.19 117.8 626080000 0 0 0 41319000 21240000 8582100 36381000 42967000 25193000 27276000 91486000 152840000 105600000 40130000 33075000 12097 213 11039 102761;102762;102763;102764;102765;102766;102767;102768;102769;102770;102771;102772;102773;102774;102775;102776;102777;102778 82149;82150;82151;82152;82153;82154;82155;82156;82157;82158;82159;82160 82152 284 10 EILAQVASEHL Unmodified 1208.6401 0.6401021 4800 Q9P0W2 HMG20B SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76.696 76.222 2 4.5283E-09 94701 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 160.11 131.93 602150000 0 229930000 15175000 12359000 18680000 23391000 27165000 30175000 26203000 36852000 30528000 45368000 23601000 25866000 56850000 12098 4800 11040 102779;102780;102781;102782;102783;102784;102785;102786;102787;102788;102789;102790;102791;102792 82161;82162;82163;82164;82165;82166;82167;82168;82169;82170;82171;82172;82173;82174;82175 82164 15 EILASFISGLFNFYEDLYFTYLEINPLVVTK Unmodified 3657.8898 0.88984101 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 0 By MS/MS 2 0 1 1 108.79 104.05 3 9.9329E-36 128359 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.822 86.84 4680900 0 4680900 0 0 0 0 0 0 0 0 0 0 0 0 0 12099 1714 11041 102793 82176;82177 82176 2 EILDAFDK Unmodified 949.47566 0.47566253 844 P07602 PSAP Prosaposin;Saposin-A;Saposin-B-Val;Saposin-B;Saposin-C;Saposin-D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64.409 63.395 2 0.0085533 72708 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 85.813 67.122 469920000 40300000 210600000 0 27326000 12330000 14279000 14624000 17391000 11256000 0 23101000 28839000 14143000 19234000 36493000 12100 844 11042 102794;102795;102796;102797;102798;102799;102800;102801;102802;102803;102804;102805;102806;102807 82178;82179;82180;82181;82182;82183;82184;82185;82186;82187;82188;82189;82190 82185 13 EILEFPAR Unmodified 973.52328 0.52328142 3933 Q96N67;Q96HP0 DOCK7;DOCK6 Dedicator of cytokinesis protein 7;Dedicator of cytokinesis protein 6 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 67.65 67.704 2 0.012727 77680 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 73.975 40.536 70638000 0 0 0 8004000 6618700 7980900 7314400 5386300 4848800 7365400 0 11606000 0 5830800 5682000 12101 3933 11043 102808;102809;102810;102811;102812;102813;102814;102815;102816;102817 82191;82192;82193;82194;82195;82196;82197;82198 82191 8 EILEQGLFSK Unmodified 1162.6234 0.6233894 4167 Q9BUP3 HTATIP2 Oxidoreductase HTATIP2 yes yes 0 0 0 By MS/MS 2 0 1 1 77.821 73.046 2 0.0054101 91088 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.764 48.923 28440000 0 28440000 0 0 0 0 0 0 0 0 0 0 0 0 0 12102 4167 11044 102818 82199 82199 1 EILETLIK Unmodified 957.57465 0.57464829 2125 Q06210 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 75.968 75.949 2 0.010604 87861 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 79.116 10.201 16635000 0 0 0 0 3884100 0 0 5292200 0 0 0 0 7459000 0 0 12103 2125 11045 102819;102820;102821 82200;82201;82202 82201 3 EILFYDR Unmodified 954.48108 0.48108226 2168 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.324 63.418 2 0.021005 72693 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 107.43 57.39 404540000 0 0 0 25040000 16983000 37404000 26181000 20752000 19268000 38962000 39415000 49655000 31713000 39312000 59851000 12104 2168 11046 102822;102823;102824;102825;102826;102827;102828;102829;102830;102831;102832;102833 82203;82204;82205;82206;82207;82208;82209;82210;82211 82203 9 EILGTAQSVGCNVDGR Unmodified 1674.7995 0.79953264 1266 P30050 RPL12 60S ribosomal protein L12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 54.547 54.536 2 2.3878E-19 62252 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 131.13 112.35 147590000 0 0 0 14352000 13021000 15358000 18826000 12172000 8553400 17851000 0 0 23556000 23900000 0 12105 1266 11047 102834;102835;102836;102837;102838;102839;102840;102841;102842 82212;82213;82214;82215;82216;82217;82218;82219 82219 6 EILGTAQSVGCNVDGRHPHDIIDDINSGAVECPAS Unmodified 3702.7002 0.70023588 1266 P30050 RPL12 60S ribosomal protein L12 yes yes 0 0 1 By MS/MS 2 0 1 1 83.453 75.323 4 0.010231 98592 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 22.008 17.151 30823000 30823000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12106 1266 11048 102843 82220 82220 1 EILGTCK Unmodified 819.41604 0.41603916 1073 P18206 VCL Vinculin yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 20.951 21.202 2 0.025135 20717 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 81.381 34.336 78909000 0 0 0 0 0 0 5622200 4447000 5253800 10061000 0 0 9664900 18000000 25860000 12107 1073 11049 102844;102845;102846;102847;102848;102849;102850 82221;82222 82222 2 EILHCLK Unmodified 911.48987 0.48987281 2168 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 38.306 33.273 2 0.029013 41241 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 132.72 79.008 118390000 82413000 0 35976000 0 0 0 0 0 0 0 0 0 0 0 0 12108 2168 11050 102851;102852 82223;82224;82225 82225 2 EILIPVFK Unmodified 957.5899 0.58990443 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 9.08 2.5 2 1 22 2 1 2 2 2 2 2 2 2 2 2 1 1 2 86.107 85.741 1;2 0.0086252 98992 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 126.67 79.6 13357000000 0 1671200000 215320000 249100000 573850000 727760000 2114800000 2755700000 2673400000 555720000 583830000 984970000 24302000 53449000 173340000 12109 1714 11051 102853;102854;102855;102856;102857;102858;102859;102860;102861;102862;102863;102864;102865;102866;102867;102868;102869;102870;102871;102872;102873;102874;102875;102876;102877 82226;82227;82228;82229;82230;82231;82232;82233 82226 6 EILLEGCAEK Unmodified 1160.5747 0.57472465 2953 Q6PID6 TTC33 Tetratricopeptide repeat protein 33 yes yes 0 0 0 By MS/MS 2 0 1 1 53.538 47.746 2 0.032834 61577 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 57.859 34.787 118290000 0 118290000 0 0 0 0 0 0 0 0 0 0 0 0 0 12110 2953 11052 102878 82234 82234 1 EILLGCTAATPPSK Unmodified 1456.7596 0.7595653 5193 Q9Y4C1 KDM3A Lysine-specific demethylase 3A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 60.747 60.851 2 0.00013863 69738 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 100.55 92.908 42539000 0 0 0 2980200 2157300 2144800 2283300 2756100 3945000 2850500 3908900 6308900 3859800 4339000 5005000 12111 5193 11053 102879;102880;102881;102882;102883;102884;102885;102886;102887;102888;102889;102890;102891 82235;82236;82237;82238;82239;82240;82241;82242;82243;82244;82245 82242 11 EILLSNSDPHDIPESK Unmodified 1792.8843 0.88430813 4077 Q99996 AKAP9 A-kinase anchor protein 9 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 62.266 56.928 3 0.00066726 69703 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 70.281 59.622 34735000 0 34735000 0 0 0 0 0 0 0 0 0 0 0 0 0 12112 4077 11054 102892;102893 82246 82246 0 EILNLTSELLQK Unmodified 1399.7922 0.79224564 3138 Q86TU7 SETD3 Histone-lysine N-methyltransferase setd3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.83 3.67 3 1 2 1 2 1 1 1 89.622 86.538 2 2.5712E-44 108517 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 236.35 139.68 160970000 5019000 147320000 2159900 0 0 1884000 0 0 0 0 0 0 0 0 4584500 12113 3138 11055 102894;102895;102896;102897;102898;102899 82247;82248;82249;82250;82251 82247 5 EILPFEK Unmodified 874.48002 0.48001963 4697 Q9NWH9 SLTM SAFB-like transcription modulator yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 66.444 64.937 2 0.023406 73643 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 86.866 19.831 98459000 1840600 33094000 0 0 0 0 0 0 7364900 0 11926000 11646000 11631000 8812900 12142000 12114 4697 11056 102900;102901;102902;102903;102904;102905;102906;102907 82252;82253;82254;82255;82256 82256 5 EILPFTDR Unmodified 989.5182 0.51819605 4973 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 yes yes 0 0 0 By MS/MS 10 0 1 1 69.389 68.911 2 0.045385 79526 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 48.561 13.266 2031900 0 0 0 0 2031900 0 0 0 0 0 0 0 0 0 0 12115 4973 11057 102908 82257 82257 1 EILPNLK Unmodified 825.496 0.49600404 4630 Q9NSV4 DIAPH3 Protein diaphanous homolog 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 57.535 56.957 2 0.023833 63335 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.025 30.503 288680000 0 69985000 2171300 0 15988000 20637000 13759000 15370000 10643000 20439000 18767000 29329000 20061000 22056000 29474000 12116 4630 11058 102909;102910;102911;102912;102913;102914;102915;102916;102917;102918;102919;102920;102921 82258;82259;82260;82261;82262;82263;82264;82265;82266 82261 9 EILQDLVK Unmodified 956.55425 0.5542472 2828 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 8.53 2.94 1 2 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 71.376 70.604 2 0.012884 81713 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 73.616 15.449 407100000 285990 338100000 0 4174000 3551400 8929900 4815700 4047300 3168300 7920600 5854900 6912200 2898800 5132100 11309000 12117 2828 11059 102922;102923;102924;102925;102926;102927;102928;102929;102930;102931;102932;102933;102934;102935;102936 82267;82268;82269;82270;82271;82272;82273 82273 7 EILQEEEDLAEIVQLVGK Unmodified 2054.0783 0.078316486 1398 P38606 ATP6V1A V-type proton ATPase catalytic subunit A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 100.31 95.866 3 1.1036E-72 119515 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 173.28 158.93 356950000 204010000 145760000 7177300 0 0 0 0 0 0 0 0 0 0 0 0 12118 1398 11060 102937;102938;102939;102940;102941 82274;82275;82276;82277;82278;82279;82280;82281 82274 8 EILQEFESK Unmodified 1121.5605 0.56045479 2097 Q03468 ERCC6 DNA excision repair protein ERCC-6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.455 60.56 2 0.0030483 68116 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.318 27.753 132890000 0 0 0 8401000 9312400 10864000 10821000 8064500 8196300 14251000 11986000 12051000 13014000 12796000 13136000 12119 2097 11061 102942;102943;102944;102945;102946;102947;102948;102949;102950;102951;102952;102953 82282;82283;82284;82285;82286;82287;82288;82289;82290;82291;82292;82293 82284 12 EILQVIQR Unmodified 997.59203 0.59202969 3037 Q76L83 ASXL2 Putative Polycomb group protein ASXL2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.462 60.567 2 0.011473 69693 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 76.847 43.489 59258000 0 0 0 2894300 3918400 4710200 4406900 3463900 3647000 5444200 4999400 6768100 5939500 5154300 7911300 12120 3037 11062 102954;102955;102956;102957;102958;102959;102960;102961;102962;102963;102964;102965 82294;82295;82296;82297;82298;82299;82300;82301;82302;82303;82304 82304 11 EILQVITSK Unmodified 1029.607 0.60701105 4196 Q9BVQ7 SPATA5L1 Spermatogenesis-associated protein 5-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching 8.67 2.98 1 5 1 1 1 1 1 1 66.173 65.209 2 0.020738 74935 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 52.867 29.074 64592000 0 50320000 0 0 1977600 3660200 2152900 0 2820900 0 0 0 0 3661400 0 12121 4196 11063 102966;102967;102968;102969;102970;102971 82305;82306 82306 2 EILSEENEMQPNGK Oxidation (M) 1632.7301 0.73011567 403 O60488 ACSL4 Long-chain-fatty-acid--CoA ligase 4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.467 31.654 2 2.2208E-22 34740 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 145.99 128.12 136960000 0 0 0 7151100 9132800 9976100 11009000 9628600 8455100 11850000 15616000 20534000 13032000 9190900 11388000 12122 403 11064 102972;102973;102974;102975;102976;102977;102978;102979;102980;102981;102982;102983 82307;82308;82309;82310;82311;82312;82313;82314;82315;82316;82317;82318;82319 82307 505 13 EILSEENEMQPNGK Unmodified 1616.7352 0.73520105 403 O60488 ACSL4 Long-chain-fatty-acid--CoA ligase 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.178 45.348 2 5.0969E-27 49775 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 177.57 165 141360000 0 0 0 5141200 7423500 9424600 7594100 13717000 6467400 14021000 18204000 16932000 10422000 11968000 20042000 12123 403 11064 102984;102985;102986;102987;102988;102989;102990;102991;102992;102993;102994;102995 82320;82321;82322;82323;82324;82325;82326;82327;82328;82329;82330;82331 82323 11 EILSELGK Unmodified 887.4964 0.49639797 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 53.174 53.096 2 0.015851 60027 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 68.214 0.23333 194100000 0 0 0 18110000 19701000 45897000 16120000 18230000 40320000 35727000 0 0 0 0 0 12124 3641 11065 102996;102997;102998;102999;103000;103001;103002 82332;82333 82332 2 EILSEVER Unmodified 973.50803 0.50802529 1570 P49368 CCT3 T-complex protein 1 subunit gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 1 2 2 2 1 2 2 2 2 2 1 47.93 48.095 2 0.0053838 49478 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 127.12 9.9486 3795800000 0 0 0 282690000 183910000 260750000 206410000 237570000 127840000 297140000 406540000 472310000 400530000 283470000 636610000 12125 1570 11066 103003;103004;103005;103006;103007;103008;103009;103010;103011;103012;103013;103014;103015;103016;103017;103018;103019;103020;103021;103022;103023 82334;82335;82336;82337;82338;82339;82340;82341;82342;82343;82344;82345;82346;82347;82348;82349;82350 82342 14 EILSIPSETASPEASLR Unmodified 1798.9313 0.93125832 4642 Q9NUA8 ZBTB40 Zinc finger and BTB domain-containing protein 40 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.374 78.431 2 9.7559E-46 90745 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 153.38 139.47 120940000 0 0 0 5173200 11057000 7952700 6743400 6762900 8722400 13199000 8917900 14686000 10627000 11737000 15361000 12126 4642 11067 103024;103025;103026;103027;103028;103029;103030;103031;103032;103033;103034;103035 82351;82352;82353;82354;82355;82356;82357;82358;82359;82360;82361;82362 82360 12 EILSSPPNDAVGELEQQLK Unmodified 2066.0532 0.053164368 4937 Q9UJC3 HOOK1 Protein Hook homolog 1 yes yes 0 0 0 By MS/MS 2.5 0.5 2 2 4 89.063 85.021 2;3 2.1448E-40 105641 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.2 115.32 107940000 0 107940000 0 0 0 0 0 0 0 0 0 0 0 0 0 12127 4937 11068 103036;103037;103038;103039 82363;82364;82365;82366 82363 4 EILSVDCSTNNPSQAK Unmodified 1761.8203 0.82032766 931 P10909 CLU Clusterin;Clusterin beta chain;Clusterin alpha chain yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 46.479 46.645 2 0.00044408 51447 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 85.522 76.034 53651000 0 0 0 4548800 4738100 3531600 3567900 0 3050400 4434700 4551600 8099400 7338600 3941300 5848100 12128 931 11069 103040;103041;103042;103043;103044;103045;103046;103047;103048;103049;103050 82367;82368;82369;82370;82371;82372;82373;82374;82375 82372 9 EILTQGQINSTSGLNK Unmodified 1701.8897 0.88972785 2825 Q5VWQ0 RSBN1 Round spermatid basic protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 59.015 53.172 2 5.8811E-05 68413 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.067 70.682 13194000 0 13194000 0 0 0 0 0 0 0 0 0 0 0 0 0 12129 2825 11070 103051 82376 82376 1 EILTRAHEK Unmodified 1095.6037 0.60365701 4321 Q9H0B6 KLC2 Kinesin light chain 2 yes yes 0 0 1 By MS/MS 2 0 1 1 14.995 10.946 2 0.037076 16284 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 105.94 52.161 12351000 12351000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12130 4321 11071 103052 82377 82377 1 EILVADEQNR Unmodified 1185.599 0.59896556 4121 Q9BRZ2 TRIM56 E3 ubiquitin-protein ligase TRIM56 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 36.031 36.292 2 0.019298 39770 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 57.859 20.131 9144700 0 0 0 0 0 0 0 3954000 0 2983800 2206800 0 0 0 0 12131 4121 11072 103053;103054;103055 82378;82379 82379 2 EILVEESNVQR Unmodified 1314.6779 0.67794416 1811 P60510 PPP4C Serine/threonine-protein phosphatase 4 catalytic subunit yes yes 0 0 0 By MS/MS 10 0 1 1 44.857 45.597 2 0.0044544 50169 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.643 33.339 6840600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6840600 12132 1811 11073 103056 82380 82380 1 EILVGDVGQTVDDPYATFVK Unmodified 2165.0892 0.089215523 1165 P23528 CFL1 Cofilin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.76 3.87 1 12 4 24 7 6 4 2 2 2 2 2 2 2 2 2 2 2 2 89.257 87.967 2;3 2.0737E-138 108961 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 261.27 222.01 21190000000 1594500000 18008000000 496710000 6583700 12540000 12131000 10951000 17592000 13791000 90476000 183860000 91975000 6475300 71383000 572190000 12133 1165 11074 103057;103058;103059;103060;103061;103062;103063;103064;103065;103066;103067;103068;103069;103070;103071;103072;103073;103074;103075;103076;103077;103078;103079;103080;103081;103082;103083;103084;103085;103086;103087;103088;103089;103090;103091;103092;103093;103094;103095;103096;103097 82381;82382;82383;82384;82385;82386;82387;82388;82389;82390;82391;82392;82393;82394;82395;82396;82397;82398;82399;82400;82401;82402;82403;82404;82405;82406;82407;82408;82409;82410;82411;82412;82413;82414;82415;82416;82417;82418 82399 33 EILVGDVGVTITDPFK Unmodified 1701.9189 0.91890272 1822 P60981 DSTN Destrin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.29 0.452 5 2 3 3 1 95.51 90.494 2;3 2.3845E-16 114282 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 135.79 111.8 510660000 416700000 88486000 5480500 0 0 0 0 0 0 0 0 0 0 0 0 12134 1822 11075 103098;103099;103100;103101;103102;103103;103104 82419;82420;82421;82422;82423;82424;82425;82426;82427;82428;82429;82430 82428 12 EIMAEDDQVFLMK Oxidation (M) 1583.7211 0.72113089 5282 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes yes 0 1 0 By MS/MS 2 0 2 2 78.762 74.018 2 6.2956E-10 93381 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.78 92.462 88074000 0 88074000 0 0 0 0 0 0 0 0 0 0 0 0 0 12135 5282 11076 103105;103106 82431;82432 82432 6693;6694 2 EIMAEDDQVFLMK 2 Oxidation (M) 1599.716 0.71604551 5282 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes yes 0 2 0 By MS/MS 2 0 1 1 69.118 63.23 2 0.0088155 80668 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 57.836 42.57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12136 5282 11076 103107 82433 82433 6693;6694 1 EIMEILNEHLLDK Unmodified 1595.8229 0.82289384 2652 Q2M389 KIAA1033 WASH complex subunit 7 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 91.093 84.579 3 5.1217E-07 107165 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.66 84.651 36368000 19034000 17334000 0 0 0 0 0 0 0 0 0 0 0 0 0 12137 2652 11077 103108;103109 82434;82435;82436 82434 3 EIMNDLEK Unmodified 990.4692 0.46919694 1474 P43246 MSH2 DNA mismatch repair protein Msh2 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 39.398 39.959 2 0.0074056 44270 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 89.752 66.229 65018000 0 0 0 0 0 0 0 0 0 0 16682000 15220000 0 9561800 23553000 12138 1474 11078 103110;103111;103112;103113;103114 82437;82438 82437 2 EINAREESLVEELSPASEK Unmodified 2129.0488 0.048807271 4228 Q9BXK5 BCL2L13 Bcl-2-like protein 13 yes yes 0 0 1 By MS/MS 2 0 1 1 78.103 75.475 3 0.0095881 91777 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 35.133 31.692 2885500 0 0 2885500 0 0 0 0 0 0 0 0 0 0 0 0 12139 4228 11079 103115 82439 82439 1 EINGIHDESNAFESK Unmodified 1688.7642 0.76419299 3573 Q8WWI1 LMO7 LIM domain only protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 42.851 42.258 3 0.0041974 47903 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 40.857 34.42 290500000 0 73991000 0 11303000 13983000 15094000 22458000 11084000 13888000 16220000 21748000 27076000 23427000 16752000 23476000 12140 3573 11080 103116;103117;103118;103119;103120;103121;103122;103123;103124;103125;103126;103127;103128;103129 82440;82441;82442;82443;82444;82445 82445 6 EINLQDIK Unmodified 971.52876 0.52876073 3733 Q96A65 EXOC4 Exocyst complex component 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 55.66 55.863 2 0.014414 62825 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 70.525 30.879 70246000 0 0 0 0 5811700 6269000 5312700 0 4081400 7420800 8436600 10330000 6994900 8014100 7574800 12141 3733 11081 103130;103131;103132;103133;103134;103135;103136;103137;103138;103139 82446;82447;82448;82449;82450;82451 82450 6 EINNPESVYYWAQK Unmodified 1739.8155 0.81550028 1569 P49366 DHPS Deoxyhypusine synthase yes yes 0 0 0 By MS/MS 10 0 1 1 76.213 76.341 2 0.035613 87119 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 43.308 32.382 7680800 0 0 0 0 0 0 0 0 0 0 0 0 0 7680800 0 12142 1569 11082 103140 82452 82452 1 EINQNVEIQR Unmodified 1241.6364 0.6364137 3495 Q8TD16 BICD2 Protein bicaudal D homolog 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 2 27.29 27.536 2;3 0.0081605 29732 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 40.724 18.083 28295000 0 0 0 0 0 6371500 3491800 0 7068300 3654800 2816000 0 0 0 4892800 12143 3495 11083 103141;103142;103143;103144;103145;103146;103147;103148 82453;82454;82455;82456 82455 4 EINSDQATQGNISSDR Unmodified 1733.7816 0.78163397 2647 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.433 27.63 2 4.4603E-113 29457 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 199.8 181.05 103910000 0 0 0 4636800 4904700 9156000 5533200 6181700 5594600 8968900 14144000 12879000 9820100 8887700 13204000 12144 2647 11084 103149;103150;103151;103152;103153;103154;103155;103156;103157;103158;103159;103160 82457;82458;82459;82460;82461;82462;82463;82464;82465;82466;82467;82468 82462 12 EINSDQATQGNISSDRGK Unmodified 1918.8981 0.89806071 2647 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 22.052 21.395 2;3 4.154E-35 26969 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 155.42 130.56 361080000 0 82953000 0 14954000 10703000 27158000 22929000 17655000 22759000 24154000 32223000 28081000 28469000 22336000 26702000 12145 2647 11085 103161;103162;103163;103164;103165;103166;103167;103168;103169;103170;103171;103172;103173;103174;103175;103176 82469;82470;82471;82472;82473;82474;82475;82476;82477;82478;82479;82480;82481;82482;82483;82484;82485;82486 82474 17 EINVNINEYK Unmodified 1234.6194 0.61936665 2993 Q6XZF7 DNMBP Dynamin-binding protein yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 60.421 59.289 2 0.002519 75187 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.82 108.39 66352000 0 42729000 0 0 3180900 0 0 0 0 0 9480800 0 6325000 4636600 0 12146 2993 11086 103177;103178;103179;103180;103181 82487;82488;82489;82490 82487 4 EINYILR Unmodified 919.51272 0.51271674 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 57.761 57.836 2 0.017142 64900 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 114.54 11.56 105020000 0 0 0 11477000 0 16346000 12491000 17169000 7293900 17972000 0 22268000 0 0 0 12147 3119 11087 103182;103183;103184;103185;103186;103187;103188 82491;82492;82493 82493 3 EIPAWVPFDPAAQITK Unmodified 1781.9352 0.93522148 1185 P25311 AZGP1 Zinc-alpha-2-glycoprotein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 1 2 1 1 1 1 2 93.204 93.287 2;3 0.0012209 108554 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 52.693 46.847 78534000 0 0 0 6289200 3406800 3705500 2028100 8668100 3088100 14317000 9347500 8269500 1816900 3719300 13878000 12148 1185 11088 103189;103190;103191;103192;103193;103194;103195;103196;103197;103198;103199;103200;103201;103202 82494;82495;82496;82497 82497 3 EIPELRNK Unmodified 997.55564 0.55564418 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 33.747 29.005 2 0.026093 36371 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 120.52 79.949 54667000 8341200 23017000 23308000 0 0 0 0 0 0 0 0 0 0 0 0 12149 3676 11089 103203;103204;103205 82498 82498 0 EIPETTPIEEVK Unmodified 1383.7133 0.71332662 3029 Q71RC2 LARP4 La-related protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.352 60.457 2 0.00031428 68694 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 82.261 54.957 120650000 0 0 0 6918100 5686300 8357800 8437000 8056700 9335500 10665000 11607000 17096000 9911900 9773900 14803000 12150 3029 11090 103206;103207;103208;103209;103210;103211;103212;103213;103214;103215;103216;103217 82499;82500;82501;82502;82503;82504;82505;82506;82507;82508;82509;82510;82511;82512 82501 13 EIPETTRTSQMQELHK Unmodified 1926.9469 0.94692516 303 O43172 PRPF4 U4/U6 small nuclear ribonucleoprotein Prp4 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 42.579 37.341 4 0.0049143 47082 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 46.926 40.356 31553000 10950000 0 20602000 0 0 0 0 0 0 0 0 0 0 0 0 12151 303 11091 103218;103219 82513;82514 82514 2 EIPFLNEQTNSK Unmodified 1418.7042 0.70415892 3631 Q92576 PHF3 PHD finger protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 6.25 3.77 1 1 2 2 1 1 76.275 72.079 2 1.7349E-07 82792 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 115.78 80.486 81802000 0 81802000 0 0 0 0 0 0 0 0 0 0 0 0 0 12152 3631 11092 103220;103221;103222;103223 82515;82516;82517;82518 82515 4 EIPIEGLEFMGHGK Unmodified 1555.7705 0.77046434 359 O43715 TRIAP1 TP53-regulated inhibitor of apoptosis 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 87.606 82.471 3 1.0893E-16 104071 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.32 94.265 41361000 5683200 33644000 2033900 0 0 0 0 0 0 0 0 0 0 0 0 12153 359 11093 103224;103225;103226 82519;82520 82519 2 EIPLPSLSK Unmodified 982.5699 0.56989727 4900 Q9UHF7 TRPS1 Zinc finger transcription factor Trps1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.69 71.759 2 0.048015 82325 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 42.599 15.715 40723000 0 0 0 2189200 2220800 3167200 2652500 2298400 2728600 4300900 3964700 3955800 3541100 3150900 6552400 12154 4900 11094 103227;103228;103229;103230;103231;103232;103233;103234;103235;103236;103237;103238 82521 82521 1 EIPLSEILR Unmodified 1068.6179 0.61791009 587 O94806 PRKD3 Serine/threonine-protein kinase D3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 84.347 84.413 2 0.0036398 97807 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 110.31 49.511 176640000 0 0 0 7696500 7956000 13734000 13019000 14052000 14847000 20115000 16604000 16900000 12168000 15074000 24478000 12155 587 11095 103239;103240;103241;103242;103243;103244;103245;103246;103247;103248;103249;103250 82522;82523;82524;82525;82526;82527;82528;82529 82524 6 EIPLSETERGEVEEDK Unmodified 1858.8796 0.87961668 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 45.236 45.315 3 0.00017463 50804 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 69.261 32.248 59053000 0 0 0 0 15190000 0 6873900 0 9117100 0 16640000 0 0 11232000 0 12156 2446 11096 103251;103252;103253;103254;103255;103256 82530;82531;82532;82533;82534 82532 5 EIPNGNTSELIFNAVHVK Unmodified 1981.0269 0.026890038 4869 Q9UDY8 MALT1 Mucosa-associated lymphoid tissue lymphoma translocation protein 1 yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 88.233 84.58 3 0.017915 101935 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 20.368 17.83 12736000 0 10863000 1872800 0 0 0 0 0 0 0 0 0 0 0 0 12157 4869 11097 103257;103258 82535 82535 1 EIPPLLGLEK Unmodified 1107.654 0.65396125 4413 Q9H6D7 HAUS4 HAUS augmin-like complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 82.594 82.63 2 0.040161 95702 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 40.002 28.932 24550000 0 0 0 1093800 1145900 1761300 1360200 0 1766500 2517500 3503200 3670400 3701400 4029800 0 12158 4413 11098 103259;103260;103261;103262;103263;103264;103265;103266;103267;103268 82536 82536 1 EIPSATQSPISK Unmodified 1256.6612 0.66123147 4096 Q9BQG0 MYBBP1A Myb-binding protein 1A yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 42.272 41.396 2 2.7028E-05 45482 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.573 50.492 94016000 3105600 20007000 0 4377000 0 4321300 4928000 5670600 4107000 9593300 9075100 9772700 0 8465500 10593000 12159 4096 11099 103269;103270;103271;103272;103273;103274;103275;103276;103277;103278;103279;103280 82537;82538;82539;82540;82541;82542 82539 6 EIPSHVLSK Unmodified 1008.5604 0.56039521 2522 Q15369 TCEB1 Transcription elongation factor B polypeptide 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.664 30.853 2 0.011592 33351 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 62.582 21.355 333930000 0 0 0 14617000 14878000 19864000 19415000 17348000 11795000 24348000 28586000 54071000 24253000 26618000 78136000 12160 2522 11100 103281;103282;103283;103284;103285;103286;103287;103288;103289;103290;103291;103292 82543;82544 82543 2 EIPVESIEEVSK Unmodified 1357.6977 0.69767655 405 O60502 MGEA5 Protein O-GlcNAcase yes yes 0 0 0 By MS/MS 2 0 1 1 74.895 66.764 2 3.5364E-10 88276 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 125.75 91.79 17848000 17848000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12161 405 11101 103293 82545 82545 1 EIPYTFEDR Unmodified 1168.5401 0.5400537 1336 P34897 SHMT2 Serine hydroxymethyltransferase, mitochondrial yes yes 0 0 0 By MS/MS 10 0 1 1 60.557 61.143 2 0.036312 68955 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.74 14.511 5752800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5752800 12162 1336 11102 103294 82546 82546 1 EIQDLEK Unmodified 873.44436 0.4443624 3023;4538 Q709C8;Q9NP74 VPS13C;PALMD Vacuolar protein sorting-associated protein 13C;Palmdelphin no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 23.287 23.418 2 0.023389 24894 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 87.754 5.4493 124050000 0 0 0 15956000 0 15709000 18385000 0 12845000 0 31062000 0 0 30090000 0 12163 3023;4538 11103 103295;103296;103297;103298;103299;103300 82547;82548;82549;82550 82550 4 EIQDLQSR Unmodified 987.49852 0.49852324 4393 Q9H4A3 WNK1 Serine/threonine-protein kinase WNK1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 22.134 22.493 2 0.0097801 23094 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 81.784 22.579 281210000 0 0 0 21766000 0 0 0 0 0 42188000 43803000 57979000 63990000 0 51485000 12164 4393 11104 103301;103302;103303;103304;103305;103306 82551;82552;82553;82554 82553 3 EIQDLQSRQK Unmodified 1243.6521 0.65206377 4393 Q9H4A3 WNK1 Serine/threonine-protein kinase WNK1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 20.012 16.348 2 3.5111E-10 21285 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 176.38 96.15 19675000 3202200 15010000 1463000 0 0 0 0 0 0 0 0 0 0 0 0 12165 4393 11105 103307;103308;103309 82555 82555 1 EIQDSQVPLEK Unmodified 1284.6561 0.65614609 1549 P48681 NES Nestin yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 42.901 42.921 2 0.01823 47765 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 55.461 35.685 46333000 0 0 0 13685000 4543100 0 5870900 0 3246400 4294400 6860500 0 7832800 0 0 12166 1549 11106 103310;103311;103312;103313;103314;103315;103316 82556;82557 82556 2 EIQEAIAVANASTMH Oxidation (M) 1599.7563 0.75627084 2656 Q2TAL8 QRICH1 Glutamine-rich protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 60.218 60.375 2 4.8846E-19 68237 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.97 98.454 36350000 0 0 0 2329300 0 2793200 4314700 0 0 0 5060500 8713800 0 5187100 7951900 12167 2656 11107 103317;103318;103319;103320;103321;103322;103323 82558;82559;82560;82561;82562;82563;82564 82560 4325 7 EIQEAIAVANASTMH Unmodified 1583.7614 0.76135622 2656 Q2TAL8 QRICH1 Glutamine-rich protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 67.306 67.824 2 5.5095E-05 77156 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.819 68.174 6795100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6795100 12168 2656 11107 103324 82565 82565 1 EIQEPDPTYEEK Unmodified 1476.662 0.66201933 389 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.998 39.178 2 2.578E-08 43385 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 135.55 114.68 130130000 0 0 0 10621000 7020600 9978300 9787400 8995400 10854000 12083000 11890000 13300000 11543000 10463000 13592000 12169 389 11108 103325;103326;103327;103328;103329;103330;103331;103332;103333;103334;103335;103336 82566;82567;82568;82569;82570;82571;82572;82573;82574;82575;82576;82577 82574 12 EIQHHLK Unmodified 903.49265 0.49265 4074;4075 Q99961;Q99962 SH3GL1;SH3GL2 Endophilin-A2;Endophilin-A1 no no 0 0 0 By matching By MS/MS 2 0 2 1 1 7.0898 4.2235 2 0.02866 5964 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 95.793 33.796 186870000 134360000 0 52511000 0 0 0 0 0 0 0 0 0 0 0 0 12170 4074;4075 11109 103337;103338 82578 82578 1 EIQHVNEEQETK Unmodified 1482.6951 0.69505079 2695 Q52LW3 ARHGAP29 Rho GTPase-activating protein 29 yes yes 0 0 0 By MS/MS 3 0 1 1 14.752 11.285 3 0.00010416 14211 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 93.839 86.461 8928500 0 8928500 0 0 0 0 0 0 0 0 0 0 0 0 0 12171 2695 11110 103339 82579 82579 1 EIQLTPQIAK Unmodified 1139.655 0.65502388 3387 Q8NB78 KDM1B Lysine-specific histone demethylase 1B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 62.1 61.706 2 0.010171 78390 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.043 45.894 79175000 0 27130000 0 2881900 2983000 0 3726100 4211700 3335000 3919800 4697200 9517300 4864800 4539700 7368400 12172 3387 11111 103340;103341;103342;103343;103344;103345;103346;103347;103348;103349;103350;103351 82580;82581;82582;82583;82584;82585;82586 82582 7 EIQMAVLLK Unmodified 1043.6049 0.60490256 3727 Q969U7 PSMG2 Proteasome assembly chaperone 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 84.033 78.911 2 0.017213 100710 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.116 39.013 32460000 10273000 20329000 1859100 0 0 0 0 0 0 0 0 0 0 0 0 12173 3727 11112 103352;103353;103354 82587;82588 82588 2 EIQMAVLLK Oxidation (M) 1059.5998 0.59981719 3727 Q969U7 PSMG2 Proteasome assembly chaperone 2 yes yes 0 1 0 By MS/MS 2 0 1 1 58.932 55.129 2 0.049051 68817 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 56.122 13.835 7343900 0 0 7343900 0 0 0 0 0 0 0 0 0 0 0 0 12174 3727 11112 103355 82589 82589 1 EIQMLAR Unmodified 859.45857 0.45857268 170 O00571;O15523 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 42.424 42.627 2 0.03046 47485 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 74.717 33.797 198930000 0 0 0 0 16389000 22095000 0 17681000 11955000 25401000 24086000 0 26251000 21883000 33189000 12175 170 11113 103356;103357;103358;103359;103360;103361;103362;103363;103364 82590;82591 82590 2 EIQMLAR Oxidation (M) 875.45349 0.4534873 170 O00571;O15523 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 14 2 2 1 1 1 2 1 1 2 1 24.179 24.295 2 0.028996 25551 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 66.994 12.468 174820000 0 0 0 64132000 13740000 7128200 9477400 16403000 0 25121000 10390000 0 11829000 10269000 6327300 12176 170 11113 103365;103366;103367;103368;103369;103370;103371;103372;103373;103374;103375;103376;103377;103378 82592;82593;82594 82592 3 EIQNAVNGVK Unmodified 1070.572 0.57202253 931 P10909 CLU Clusterin;Clusterin beta chain;Clusterin alpha chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.139 27.337 2 0.001553 28120 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.195 62.692 231550000 0 0 0 14816000 14946000 17308000 17096000 18966000 14690000 24764000 19785000 28044000 23190000 15427000 22520000 12177 931 11114 103379;103380;103381;103382;103383;103384;103385;103386;103387;103388;103389;103390 82595;82596;82597;82598;82599;82600;82601;82602;82603;82604;82605;82606 82598 12 EIQNLIK Unmodified 856.50182 0.5018177 3779 Q96CN7 ISOC1 Isochorismatase domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 50.835 44.947 2 0.025641 58294 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.919 5.2506 307200000 11046000 290020000 6135400 0 0 0 0 0 0 0 0 0 0 0 0 12178 3779 11115 103391;103392;103393 82607;82608 82607 2 EIQRLQEDTDK Unmodified 1373.6787 0.67867245 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 2 3 2 22.63 18.702 2;3 2.5375E-08 26418 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 131.83 67.529 294400000 79890000 170320000 44181000 0 0 0 0 0 0 0 0 0 0 0 0 12179 965 11116 103394;103395;103396;103397;103398;103399;103400 82609;82610;82611;82612;82613;82614;82615 82612 6 EIQSAFVSVLSENDELSQDVASK Unmodified 2494.2075 0.20749276 2828 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.29 0.452 5 2 1 4 2 92.165 87.974 2;3 3.8043E-97 109897 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 152.48 147.93 352930000 28743000 305950000 18229000 0 0 0 0 0 0 0 0 0 0 0 0 12180 2828 11117 103401;103402;103403;103404;103405;103406;103407 82616;82617;82618;82619;82620;82621 82617 6 EIQSLSGRPR Unmodified 1141.6204 0.62036971 2975 Q6UUV7 CRTC3 CREB-regulated transcription coactivator 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 2 20.811 21.132 2;3 0.00037855 21237 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 111.46 57.704 1257000000 0 0 0 0 0 151900000 123160000 68569000 133080000 53728000 186760000 212260000 53172000 0 274410000 12181 2975 11118 103408;103409;103410;103411;103412;103413;103414;103415;103416;103417 82622;82623;82624;82625;82626;82627;82628;82629;82630;82631 82631 10 EIQSSNLETAMSVIGDR Oxidation (M) 1864.8837 0.8836562 4716 Q9NX55 HYPK Huntingtin-interacting protein K yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 3 2 3 3 68.008 68.252 2;3 4.3894E-144 78020 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 208.68 188.47 249790000 0 0 0 0 0 0 9375900 8666200 17872000 41737000 65090000 107050000 0 0 0 12182 4716 11119 103418;103419;103420;103421;103422;103423;103424;103425;103426;103427;103428;103429;103430 82632;82633;82634;82635;82636;82637;82638;82639;82640;82641 82640 6107 10 EIQSSNLETAMSVIGDR Unmodified 1848.8887 0.88874158 4716 Q9NX55 HYPK Huntingtin-interacting protein K yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 2 2 2 2 2 2 1 82.589 82.727 2;3 1.4953E-96 95691 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 228.07 200.06 204510000 0 0 0 0 1115000 0 6270600 19041000 11732000 41131000 46888000 69683000 0 0 8652100 12183 4716 11119 103431;103432;103433;103434;103435;103436;103437;103438;103439;103440;103441;103442;103443;103444 82642;82643;82644;82645;82646;82647;82648;82649;82650 82642 5 EIQSSNLETAMSVIGDRR Unmodified 2004.9899 0.9898526 4716 Q9NX55 HYPK Huntingtin-interacting protein K yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 1 1 2 2 2 2 3 1 1 78.652 78.781 2;3 8.744E-49 90859 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 157.8 157.8 2522400000 0 0 0 0 14767000 23497000 66798000 202790000 200790000 467280000 457880000 1028400000 0 9412300 50801000 12184 4716 11120 103445;103446;103447;103448;103449;103450;103451;103452;103453;103454;103455;103456;103457;103458;103459;103460 82651;82652;82653;82654;82655;82656;82657;82658;82659;82660;82661;82662;82663;82664;82665;82666 82652 15 EIQSSNLETAMSVIGDRR Oxidation (M) 2020.9848 0.98476723 4716 Q9NX55 HYPK Huntingtin-interacting protein K yes yes 0 1 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 2 1 3 2 3 3 4 3 62.113 62.24 2;3 5.4365E-38 71306 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 127.3 120.41 4807800000 0 0 0 12197000 25137000 27507000 292020000 283420000 236890000 807110000 1187700000 1935800000 0 0 0 12185 4716 11120 103461;103462;103463;103464;103465;103466;103467;103468;103469;103470;103471;103472;103473;103474;103475;103476;103477;103478;103479;103480;103481;103482 82667;82668;82669;82670;82671;82672;82673;82674;82675;82676;82677;82678;82679;82680;82681;82682;82683;82684;82685;82686 82673 6107 19 EIQSVYIR Unmodified 1006.5447 0.54474515 4113 Q9BRQ0 PYGO2 Pygopus homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.724 46.89 2 0.0067278 52648 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 98.418 45.735 189570000 0 0 0 12340000 8577400 11065000 12655000 13045000 11376000 17630000 16831000 21506000 14070000 15475000 35003000 12186 4113 11121 103483;103484;103485;103486;103487;103488;103489;103490;103491;103492;103493;103494 82687;82688;82689;82690;82691;82692;82693;82694;82695;82696;82697 82690 10 EIQTLLSHK Unmodified 1067.5975 0.597509 1970 P78316 NOP14 Nucleolar protein 14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 6 4 2 2 1 1 1 1 48.718 42.842 2 0.0081026 59171 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 91.069 51.406 17942000 13889000 0 4053300 0 0 0 0 0 0 0 0 0 0 0 0 12187 1970 11122 103495;103496;103497;103498 82698;82699;82700;82701 82699 4 EIQTTQQER Unmodified 1131.552 0.55201537 413 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 1 2 1 8.6756 8.8043 2 0.0035134 6247 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 107.66 68.873 41104000 0 0 0 3423200 2568600 3171600 3076200 2051100 779560 3072700 7894500 4782400 4072800 911470 5299800 12188 413 11123 103499;103500;103501;103502;103503;103504;103505;103506;103507;103508;103509;103510;103511 82702;82703;82704;82705;82706;82707;82708;82709;82710;82711;82712 82706 11 EIQTTQQERTGDQQEETMPTK Oxidation (M) 2493.1289 0.12892486 413 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta yes yes 0 1 1 By MS/MS 2.5 0.5 1 1 2 23.343 19.349 3 0.0016513 25631 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 44.089 35.901 18131000 0 18131000 0 0 0 0 0 0 0 0 0 0 0 0 0 12189 413 11124 103512;103513 82713 82713 514 1 EIQTTQQERTGDQQEETMPTK Unmodified 2477.134 0.13401024 413 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 33.587 29.009 3 1.0689E-08 38014 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.817 72.164 26587000 0 26587000 0 0 0 0 0 0 0 0 0 0 0 0 0 12190 413 11124 103514;103515 82714;82715 82714 2 EIQTTTGNQQVLVR Unmodified 1585.8424 0.84238373 3486 Q8TC12 RDH11 Retinol dehydrogenase 11 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 45.254 45.849 2 0.010691 50429 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.143 46.577 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12191 3486 11125 103516;103517 82716;82717 82716 2 EIQTTTGNQQVLVRK Unmodified 1713.9373 0.93734675 3486 Q8TC12 RDH11 Retinol dehydrogenase 11 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 35.627 35.86 3 0.0020546 39539 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 36.529 25.267 46725000 0 0 0 0 3732200 3185100 7316600 5163200 2266800 4103300 5572200 5678900 3688700 0 6018600 12192 3486 11126 103518;103519;103520;103521;103522;103523;103524;103525;103526;103527 82718;82719;82720;82721;82722;82723 82719 6 EIQVIPLQRDDED Unmodified 1568.7682 0.76821574 1244 P29218 IMPA1 Inositol monophosphatase 1 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 74.416 70.562 2 1.3646E-35 85134 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 182.71 145.52 499830000 0 491700000 8122200 0 0 0 0 0 0 0 0 0 0 0 0 12193 1244 11127 103528;103529;103530 82724;82725;82726 82725 3 EIQVQHPAAK Unmodified 1119.6037 0.60365701 1570 P49368 CCT3 T-complex protein 1 subunit gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 17.534 17.648 2 1.1422E-09 17963 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 145.16 93.368 425780000 0 0 0 25505000 27928000 46807000 37434000 29906000 26988000 44712000 0 0 53117000 45511000 87869000 12194 1570 11128 103531;103532;103533;103534;103535;103536;103537;103538;103539;103540 82727;82728;82729;82730;82731;82732;82733;82734;82735;82736;82737 82728 5 EIQWETR Unmodified 960.46649 0.46649483 3995 Q96SU4 OSBPL9 Oxysterol-binding protein-related protein 9 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.659 39.838 2 0.025011 43289 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.635 62.54 86796000 0 0 0 4373200 4234100 4399100 5044800 6527300 3743200 8074000 10684000 9501400 7225900 7431100 15557000 12195 3995 11129 103541;103542;103543;103544;103545;103546;103547;103548;103549;103550;103551;103552 82738;82739 82739 2 EIRDEYVETLSK Unmodified 1480.7409 0.74093835 3310 Q8N1B4 VPS52 Vacuolar protein sorting-associated protein 52 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 2 1 1 1 1 1 50.357 49.343 3 0.00062914 61766 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 88.021 75.394 190490000 0 32332000 8562900 12793000 10171000 13414000 11912000 13917000 9943300 0 18995000 24629000 0 13918000 19899000 12196 3310 11130 103553;103554;103555;103556;103557;103558;103559;103560;103561;103562;103563;103564;103565;103566;103567 82740;82741;82742;82743;82744;82745;82746;82747;82748;82749;82750;82751;82752;82753;82754;82755;82756 82750 16 EIREDLPVNTSK Unmodified 1399.7307 0.73070802 3147 Q86UE4 MTDH Protein LYRIC yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 40.96 41.151 3 0.0094264 45263 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 46.159 39.723 82960000 0 0 0 0 4466800 5549800 9233400 9272900 5784800 6884000 11588000 13389000 9925500 6864600 0 12197 3147 11131 103568;103569;103570;103571;103572;103573;103574;103575;103576;103577 82757;82758;82759;82760 82760 1 EIRESTGAQVQVAGDMLPNSTER Oxidation (M) 2503.1973 0.1972792 2521;2520 Q15365;Q15366;P57721 PCBP1;PCBP2;PCBP3 Poly(rC)-binding protein 1;Poly(rC)-binding protein 2;Poly(rC)-binding protein 3 no no 0 1 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 2 53.625 53.908 3 3.5385E-67 60913 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 122.51 114.32 310380000 0 0 0 0 0 26941000 12885000 21102000 24138000 47143000 40012000 34807000 24733000 27546000 51071000 12198 2520;2521 11132 103578;103579;103580;103581;103582;103583;103584;103585;103586;103587;103588 82761;82762;82763;82764;82765;82766;82767;82768;82769;82770;82771;82772;82773;82774;82775;82776;82777;82778 82764 4144 18 EIRESTGAQVQVAGDMLPNSTER Unmodified 2487.2024 0.20236458 2521;2520 Q15365;Q15366;P57721 PCBP1;PCBP2;PCBP3 Poly(rC)-binding protein 1;Poly(rC)-binding protein 2;Poly(rC)-binding protein 3 no no 0 0 1 By MS/MS By matching By MS/MS 10 0 3 1 1 1 65.384 65.717 3 2.8861E-10 74267 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.991 49.203 15285000 0 0 0 0 0 0 0 0 0 4593100 3107600 0 0 0 7584500 12199 2520;2521 11132 103589;103590;103591 82779;82780 82780 1 EIRLEHEEGAPCTAIR Unmodified 1879.921 0.92104476 2037;2132 Q00536;Q07002 CDK16;CDK18 Cyclin-dependent kinase 16;Cyclin-dependent kinase 18 no no 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 2 1 2 2 2 2 2 2 45.986 46.306 3;4 1.776E-07 52034 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 76.391 60.507 139370000 0 0 0 0 0 8009100 9656200 7124200 11247000 14694000 0 21137000 27749000 15693000 24059000 12200 2037;2132 11133 103592;103593;103594;103595;103596;103597;103598;103599;103600;103601;103602;103603;103604;103605;103606;103607 82781;82782;82783;82784;82785;82786;82787;82788;82789;82790;82791;82792;82793;82794 82781 13 EIRLIGNESK Unmodified 1157.6404 0.64043645 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 42.713 38.269 3 0.0015959 47819 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 79.201 45.824 75940000 0 36065000 39875000 0 0 0 0 0 0 0 0 0 0 0 0 12201 3641 11134 103608;103609 82795 82795 1 EIRLIQEEK Unmodified 1156.6452 0.64518747 2239;479 O75334;Q13136 PPFIA2;PPFIA1 Liprin-alpha-2;Liprin-alpha-1 no no 0 0 1 By MS/MS 2 0 1 1 44.426 40.655 3 0.019246 51228 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 51.066 20.812 6298900 0 0 6298900 0 0 0 0 0 0 0 0 0 0 0 0 12202 479;2239 11135 103610 82796 82796 1 EIRPALELLEPIEQK Unmodified 1776.9986 0.99855002 1620 P50395 GDI2 Rab GDP dissociation inhibitor beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 3.11 2.47 12 4 2 8 7 1 2 89.854 85.933 2;3 5.7569E-51 104012 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 166.09 156.8 2075700000 1214000000 787720000 27752000 0 0 0 0 0 0 0 0 0 0 0 46143000 12203 1620 11136 103611;103612;103613;103614;103615;103616;103617;103618;103619;103620;103621;103622;103623;103624;103625;103626;103627;103628 82797;82798;82799;82800;82801;82802;82803;82804;82805;82806;82807;82808;82809;82810;82811;82812 82812 15 EIRPQDCPISR Unmodified 1369.6772 0.67723266 4873 Q9UET6 FTSJ1 Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 29.456 29.678 3 0.0048506 31059 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 46.592 39.222 20892000 0 0 0 0 0 2928400 0 2903000 0 4023600 5787100 0 0 5250400 0 12204 4873 11137 103629;103630;103631;103632;103633;103634 82813;82814;82815;82816 82815 4 EIRPTYAGSK Unmodified 1120.5877 0.58767259 184 O14519;O75956 CDK2AP1;CDK2AP2 Cyclin-dependent kinase 2-associated protein 1;Cyclin-dependent kinase 2-associated protein 2 yes no 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 23.171 18.67 2 8.6533E-12 26322 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 180.15 134.18 139860000 132530000 7323000 0 0 0 0 0 0 0 0 0 0 0 0 0 12205 184 11138 103635;103636 82817 82817 1 EISAQIR Unmodified 815.45012 0.45011648 953 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 25.958 26.138 2 0.015564 27893 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 117.7 7.1632 317130000 0 0 0 0 521030 40464000 33491000 40297000 26155000 44129000 41506000 51741000 38824000 0 0 12206 953 11139 103637;103638;103639;103640;103641;103642;103643;103644;103645 82818;82819;82820;82821;82822 82819 3 EISDAQWEDVVQK Unmodified 1545.7311 0.73110195 2618 Q16626 MEA1 Male-enhanced antigen 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 69.615 69.888 2 9.5692E-05 79702 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 106.62 98.037 39854000 0 0 0 0 0 0 2114700 3663800 0 0 8608300 10256000 0 4666500 10544000 12207 2618 11140 103646;103647;103648;103649;103650;103651 82823;82824;82825;82826;82827;82828;82829 82823 7 EISDDEAEEEK Unmodified 1292.5256 0.52558543 862 P08238;Q58FF7 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.88 3.69 2 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 27.348 27.373 2 1.487E-10 92622 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 152.28 116.84 480240000 67465000 77657000 0 21433000 6920500 42700000 17961000 9385200 10855000 24400000 59012000 25071000 36796000 32607000 47974000 12208 862 11141 103652;103653;103654;103655;103656;103657;103658;103659;103660;103661;103662;103663;103664;103665;103666;103667 82830;82831;82832;82833;82834;82835;82836;82837;82838;82839;82840;82841;82842;82843;82844;82845;82846 82836 17 EISDDEAEEEKGEK Unmodified 1606.6846 0.68460526 862 P08238;Q58FF7 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 0 0 1 By MS/MS 2.5 0.5 1 1 2 16.65 13.167 3 0.02116 17255 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 47.606 39.882 13726000 0 13726000 0 0 0 0 0 0 0 0 0 0 0 0 0 12209 862 11142 103668;103669 82847 82847 0 EISDIVQR Unmodified 958.50836 0.50835964 731 P00519 ABL1 Tyrosine-protein kinase ABL1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.86 39.041 2 0.015253 43689 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 69.176 19.586 69305000 0 0 0 4338900 4190400 5888600 5217500 4328600 3637600 7358500 6686000 7718500 4910700 3888100 11142000 12210 731 11143 103670;103671;103672;103673;103674;103675;103676;103677;103678;103679;103680;103681 82848;82849;82850;82851;82852;82853;82854;82855 82848 8 EISEASENIYSDVR Unmodified 1610.7424 0.74239491 3601 Q8WYP5 AHCTF1 Protein ELYS yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 56.954 57.245 2 8.4325E-12 65030 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 101.95 66.01 24298000 0 0 0 0 0 0 3749800 0 0 3705800 5819500 0 0 3889400 7133900 12211 3601 11144 103682;103683;103684;103685;103686;103687;103688 82856;82857;82858;82859;82860;82861 82857 6 EISELNETFLSDSEK Unmodified 1739.8101 0.81014013 3242 Q8IWJ2 GCC2 GRIP and coiled-coil domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 7 3.69 1 1 3 2 1 1 1 77.266 75.79 2 2.4345E-15 90228 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 138.75 120.49 273390000 0 250140000 0 0 0 0 0 0 0 0 5389300 8092100 0 0 9770100 12212 3242 11145 103689;103690;103691;103692;103693 82862;82863;82864;82865 82863 4 EISERQLEEALETLK Unmodified 1786.9313 0.93125832 3495 Q8TD16 BICD2 Protein bicaudal D homolog 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 94.109 87.596 3 5.9377E-50 111137 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 127.18 105.02 59777000 34411000 25366000 0 0 0 0 0 0 0 0 0 0 0 0 0 12213 3495 11146 103694;103695 82866;82867;82868 82868 3 EISEVFPDQFIHLGGDEVEFK Unmodified 2434.1693 0.16925676 845 P07686 HEXB Beta-hexosaminidase subunit beta;Beta-hexosaminidase subunit beta chain B;Beta-hexosaminidase subunit beta chain A yes yes 0 0 0 By MS/MS By MS/MS 2.67 0.471 1 2 2 1 96.042 91.078 3 2.2685E-13 114821 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.55 89.334 46211000 44847000 1364900 0 0 0 0 0 0 0 0 0 0 0 0 0 12214 845 11147 103696;103697;103698 82869;82870 82870 2 EISFAYEVLSNPEK Unmodified 1624.7985 0.79845323 440 O60884 DNAJA2 DnaJ homolog subfamily A member 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 84.063 82.96 2;3 1.6751E-08 96053 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 130.23 114.09 114180000 8350300 23980000 1275500 0 3562900 4918500 2526200 4442000 5471100 11650000 10502000 11995000 0 5726800 19777000 12215 440 11148 103699;103700;103701;103702;103703;103704;103705;103706;103707;103708;103709;103710;103711 82871;82872;82873;82874;82875;82876;82877;82878;82879;82880;82881;82882 82876 9 EISFDTMQQELQIGADDVEAFVIDAVR Unmodified 3038.4543 0.45428175 3046 Q7L2H7 EIF3M Eukaryotic translation initiation factor 3 subunit M yes yes 0 0 0 By MS/MS 2 0 1 1 106.1 97.972 3 0.0070906 125738 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 25.448 22.998 4770000 4770000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12216 3046 11149 103712 82883 82883 1 EISFDTMQQELQIGADDVEAFVIDAVRTK Unmodified 3267.5969 0.59692324 3046 Q7L2H7 EIF3M Eukaryotic translation initiation factor 3 subunit M yes yes 0 0 1 By MS/MS By MS/MS 2 0.816 1 1 1 1 2 106.76 105.71 3 3.4457E-47 95854 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 107.76 102.1 23179000 16721000 6457500 0 0 0 0 0 0 0 0 0 0 0 0 0 12217 3046 11150 103713;103714;103715 82884;82885 82885 2 EISFDTMQQELQIGADDVEAFVIDAVRTK Oxidation (M) 3283.5918 0.59183786 3046 Q7L2H7 EIF3M Eukaryotic translation initiation factor 3 subunit M yes yes 0 1 1 By MS/MS 2 0 1 1 102.71 94.58 3 1.2185E-11 121601 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.465 68.058 10575000 10575000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12218 3046 11150 103716 82886;82887 82886 4670 2 EISGHTSGIK Unmodified 1027.5298 0.52982336 5167 Q9Y3F4 STRAP Serine-threonine kinase receptor-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 2 1 1 1 1 1 1 1 1 1 11.096 10.391 2 9.0042E-05 12851 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 156.35 63.877 873050000 78153000 522040000 203320000 0 1982900 4267300 5568900 3322100 3031500 4507500 11962000 6159800 7055000 11345000 10338000 12219 5167 11151 103717;103718;103719;103720;103721;103722;103723;103724;103725;103726;103727;103728;103729;103730;103731;103732 82888;82889;82890;82891;82892;82893;82894;82895;82896;82897 82890 8 EISGHTSGIKK Unmodified 1155.6248 0.62478638 5167 Q9Y3F4 STRAP Serine-threonine kinase receptor-associated protein yes yes 0 0 1 By MS/MS 2 0 1 1 10.269 6.4939 2 1.7405E-08 10489 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 134.51 78.978 19439000 19439000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12220 5167 11152 103733 82898 82898 1 EISGQLK Unmodified 773.42832 0.42831841 3953 Q96Q15 SMG1 Serine/threonine-protein kinase SMG1 yes yes 0 0 0 By matching By MS/MS By MS/MS 2 0 4 1 2 1 15.695 14.871 2 0.039683 19632 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.1 31.693 22447000 64464 22034000 348600 0 0 0 0 0 0 0 0 0 0 0 0 12221 3953 11153 103734;103735;103736;103737 82899 82899 1 EISIMQQCDSPHVVK Unmodified 1769.844 0.84403999 2227 Q13043 STK4 Serine/threonine-protein kinase 4;Serine/threonine-protein kinase 4 37kDa subunit;Serine/threonine-protein kinase 4 18kDa subunit yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 62 57.154 3 0.0019041 74145 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 42.314 39.087 18795000 0 14432000 4362300 0 0 0 0 0 0 0 0 0 0 0 0 12222 2227 11154 103738;103739 82900;82901;82902 82901 3 EISITHHVK Unmodified 1062.5822 0.58219329 2531 Q15418 RPS6KA1 Ribosomal protein S6 kinase alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 6 4 2 2 1 1 1 1 21.309 19.311 2 0.020387 19242 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 53.166 17.286 42811000 34184000 0 4757000 0 0 2223400 1646100 0 0 0 0 0 0 0 0 12223 2531 11155 103740;103741;103742;103743 82903;82904 82903 2 EISLWFKPEELVDYK Unmodified 1894.9717 0.97166657 1138 P22392 NME2 Nucleoside diphosphate kinase B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.38 0.484 5 3 3 4 1 95.524 90.739 2;3 0.00019498 114456 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.197 56.406 1428900000 1275500000 150820000 2563100 0 0 0 0 0 0 0 0 0 0 0 0 12224 1138 11156 103744;103745;103746;103747;103748;103749;103750;103751 82905;82906;82907;82908;82909;82910;82911 82905 5 EISNSDGTRPVGMLGK Unmodified 1659.825 0.82501911 4690 Q9NW64 RBM22 Pre-mRNA-splicing factor RBM22 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.401 43.576 3 8.8331E-05 48694 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 54.501 40.148 261890000 0 0 0 13069000 9788600 24469000 14174000 18450000 17502000 20189000 22708000 20323000 14839000 22985000 63394000 12225 4690 11157 103752;103753;103754;103755;103756;103757;103758;103759;103760;103761;103762;103763 82912;82913;82914;82915;82916;82917;82918;82919;82920;82921;82922;82923;82924 82913 11 EISPGSGPGEIRK Unmodified 1325.6939 0.69392858 334 O43491 EPB41L2 Band 4.1-like protein 2 yes yes 0 0 1 By MS/MS 2 0 1 1 31.299 28.064 3 0.0048737 35473 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 56.139 46.945 10474000 0 0 10474000 0 0 0 0 0 0 0 0 0 0 0 0 12226 334 11158 103764 82925 82925 1 EISQDSLAARDGNIQEGDVVLK Unmodified 2356.187 0.18703209 2136 Q07157 TJP1 Tight junction protein ZO-1 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 72.494 67.458 3 1.021E-07 81966 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 73.21 58.738 49763000 0 49763000 0 0 0 0 0 0 0 0 0 0 0 0 0 12227 2136 11159 103765;103766 82926;82927 82927 2 EISQFLNR Unmodified 1005.5243 0.52434406 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 53.928 54.18 2 0.0082464 60530 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 86.866 49.772 56813000 0 0 0 0 0 4190200 5946900 5682400 4651100 0 10922000 0 8068700 5290100 12062000 12228 2446 11160 103767;103768;103769;103770;103771;103772;103773;103774 82928;82929;82930;82931;82932;82933;82934 82933 7 EISSSQWEK Unmodified 1092.5088 0.50875357 379 O43913 ORC5 Origin recognition complex subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 30.58 30.881 2 0.0031256 34030 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 91.069 70.93 104520000 0 0 0 0 11014000 0 0 0 9768000 14800000 11823000 15827000 12872000 13564000 14856000 12229 379 11161 103775;103776;103777;103778;103779;103780;103781;103782 82935;82936;82937;82938;82939;82940;82941;82942;82943 82943 9 EISSVDCIALVDTIDNSSK Unmodified 2064.9885 0.9885152 4858 Q9UBT6 POLK DNA polymerase kappa yes yes 0 0 0 By MS/MS 2 0 1 1 89.239 84.366 2 4.4304E-12 104894 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.908 69.504 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12230 4858 11162 103783 82944 82944 1 EISTPTHWSK Unmodified 1184.5826 0.58258722 3255 Q8IX12 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.42 3.24 1 4 21 3 1 1 2 2 1 2 1 2 2 2 1 2 2 2 36.67 35.216 2;3 0.0048243 38546 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 71.425 41.24 1130100000 346010000 37978000 90438000 31206000 27073000 31367000 39397000 42259000 47667000 63196000 72841000 50757000 69469000 67457000 112940000 12231 3255 11163 103784;103785;103786;103787;103788;103789;103790;103791;103792;103793;103794;103795;103796;103797;103798;103799;103800;103801;103802;103803;103804;103805;103806;103807;103808;103809 82945;82946;82947;82948;82949;82950;82951;82952;82953 82945 6 EISVNDLNESSIPR Unmodified 1571.7791 0.77911477 3458 Q8NHP6 MOSPD2 Motile sperm domain-containing protein 2 yes yes 0 0 0 By MS/MS 10 0 1 1 70.383 70.567 2 0.011369 81140 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 53.528 37.274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12232 3458 11164 103810 82954 82954 1 EITALAPSTMK Oxidation (M) 1176.606 0.60602477 1951;1815;1958 P60709;P63261;P68032;P63267;P68133;P62736 ACTB;ACTG1;ACTC1;ACTG2;ACTA1;ACTA2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, aortic smooth muscle no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.85 3.52 2 37 8 125 17 19 11 11 9 9 10 13 10 6 9 12 11 13 12 48.64 47.606 1;2;3 3.2065E-09 64076 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 135.43 78.618 66914000000 2639600000 17914000000 815660000 3183400000 3233600000 3636700000 3524300000 2871600000 3132400000 4375500000 4392300000 5918500000 4227800000 3174800000 3874100000 12233 1815;1951;1958 11165 103811;103812;103813;103814;103815;103816;103817;103818;103819;103820;103821;103822;103823;103824;103825;103826;103827;103828;103829;103830;103831;103832;103833;103834;103835;103836;103837;103838;103839;103840;103841;103842;103843;103844;103845;103846;103847;103848;103849;103850;103851;103852;103853;103854;103855;103856;103857;103858;103859;103860;103861;103862;103863;103864;103865;103866;103867;103868;103869;103870;103871;103872;103873;103874;103875;103876;103877;103878;103879;103880;103881;103882;103883;103884;103885;103886;103887;103888;103889;103890;103891;103892;103893;103894;103895;103896;103897;103898;103899;103900;103901;103902;103903;103904;103905;103906;103907;103908;103909;103910;103911;103912;103913;103914;103915;103916;103917;103918;103919;103920;103921;103922;103923;103924;103925;103926;103927;103928;103929;103930;103931;103932;103933;103934;103935;103936;103937;103938;103939;103940;103941;103942;103943;103944;103945;103946;103947;103948;103949;103950;103951;103952;103953;103954;103955;103956;103957;103958;103959;103960;103961;103962;103963;103964;103965;103966;103967;103968;103969;103970;103971;103972;103973;103974;103975;103976;103977;103978;103979;103980;103981;103982 82955;82956;82957;82958;82959;82960;82961;82962;82963;82964;82965;82966;82967;82968;82969;82970;82971;82972;82973;82974;82975;82976;82977;82978;82979;82980;82981;82982;82983;82984;82985;82986;82987;82988;82989;82990;82991;82992;82993;82994;82995;82996;82997;82998;82999;83000;83001;83002;83003;83004;83005;83006;83007;83008;83009;83010;83011;83012;83013;83014;83015;83016;83017;83018;83019;83020;83021;83022;83023;83024;83025;83026;83027;83028;83029;83030;83031;83032;83033;83034;83035;83036;83037;83038;83039;83040;83041;83042;83043;83044;83045;83046;83047;83048;83049;83050;83051;83052;83053;83054;83055;83056;83057;83058;83059;83060;83061;83062;83063;83064;83065;83066;83067;83068;83069;83070;83071;83072;83073;83074;83075;83076;83077;83078;83079;83080;83081;83082;83083;83084;83085;83086;83087;83088;83089;83090;83091;83092;83093;83094;83095;83096;83097;83098;83099;83100;83101;83102;83103;83104;83105;83106;83107;83108;83109;83110;83111;83112;83113;83114;83115;83116;83117;83118;83119;83120;83121;83122;83123;83124;83125;83126;83127;83128;83129;83130;83131;83132;83133;83134;83135;83136;83137;83138;83139;83140;83141;83142;83143;83144;83145;83146;83147;83148;83149;83150;83151;83152;83153;83154;83155;83156;83157;83158;83159;83160;83161;83162;83163;83164;83165;83166;83167;83168;83169;83170;83171;83172;83173;83174;83175;83176;83177;83178;83179;83180;83181;83182;83183;83184;83185;83186;83187;83188;83189;83190;83191;83192;83193;83194;83195;83196;83197;83198;83199;83200;83201;83202;83203;83204;83205;83206;83207;83208;83209;83210;83211;83212;83213;83214;83215;83216;83217;83218;83219 83010 2942 252 EITALAPSTMK Unmodified 1160.6111 0.61111015 1951;1815;1958 P60709;P63261;P68032;P63267;P68133;P62736 ACTB;ACTG1;ACTC1;ACTG2;ACTA1;ACTA2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, aortic smooth muscle no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.19 3.95 1 11 3 16 3 10 2 1 1 1 1 2 1 1 3 2 1 1 1 59.495 56.914 2;3 3.2798E-09 73827 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 140.75 98.645 95034000000 2261900000 39483000000 563050000 3142500000 3653000000 4237900000 3783500000 3886600000 2720700000 4446400000 5638900000 4979500000 4033000000 4857200000 7346900000 12234 1815;1951;1958 11165 103983;103984;103985;103986;103987;103988;103989;103990;103991;103992;103993;103994;103995;103996;103997;103998;103999;104000;104001;104002;104003;104004;104005;104006;104007;104008;104009;104010;104011;104012;104013 83220;83221;83222;83223;83224;83225;83226;83227;83228;83229;83230;83231;83232;83233;83234;83235;83236;83237;83238;83239;83240;83241;83242;83243;83244;83245;83246;83247;83248;83249;83250;83251;83252;83253;83254;83255;83256;83257;83258;83259;83260;83261;83262;83263;83264;83265;83266;83267;83268;83269;83270;83271;83272;83273;83274;83275;83276;83277;83278;83279;83280;83281;83282;83283;83284;83285;83286;83287 83258 66 EITAQSDASEIR Unmodified 1318.6365 0.63647328 291 O15516 CLOCK Circadian locomoter output cycles protein kaput yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 33.605 34.121 2 0.00083108 36439 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.885 50.532 8600900 0 0 0 0 0 0 0 0 0 0 0 0 0 3496000 5105000 12235 291 11166 104014;104015;104016;104017 83288;83289;83290;83291 83290 4 EITCDNFDETVK Unmodified 1469.6344 0.63442437 28 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.86 3.4 1 1 5 2 1 1 1 1 1 51.279 48.843 2 2.5937E-05 55357 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 94.297 88.376 134800000 0 119200000 0 0 0 0 0 0 0 0 0 0 0 6254700 9343300 12236 28 11167 104018;104019;104020;104021;104022;104023;104024 83292;83293;83294;83295;83296;83297 83296 6 EITCRSYLMTNYESAPPSPQYK Oxidation (M) 2650.2043 0.20433841 476 O75223 GGCT Gamma-glutamylcyclotransferase yes yes 0 1 1 By MS/MS 2 0 1 1 70.087 61.802 3 0.0012372 82263 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.229 42.254 14427000 14427000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12237 476 11168 104025 83298 83298 599 1 EITCRSYLMTNYESAPPSPQYK Unmodified 2634.2094 0.20942379 476 O75223 GGCT Gamma-glutamylcyclotransferase yes yes 0 0 1 By MS/MS 2 0 1 1 76.084 67.953 3 0.0014493 89578 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.472 43.216 41432000 41432000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12238 476 11168 104026 83299 83299 1 EITDIAAAAESLQPK Unmodified 1555.8094 0.80935227 3006 Q6ZRS2 SRCAP Helicase SRCAP yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 81.654 81.643 2 0.00029715 94315 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 67.153 35.731 25726000 0 0 0 2231900 3659500 3539500 3646100 0 2678200 0 0 6571900 3399300 0 0 12239 3006 11169 104027;104028;104029;104030;104031;104032;104033;104034;104035 83300;83301;83302;83303;83304;83305;83306;83307 83301 8 EITFPDQTVK Unmodified 1176.6027 0.60265396 4508 Q9HC77 CENPJ Centromere protein J yes yes 0 0 0 By MS/MS 10 0 1 1 45.521 45.69 2 0.013788 50953 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 51.059 36.39 11377000 0 0 0 0 0 0 0 11377000 0 0 0 0 0 0 0 12240 4508 11170 104036 83308 83308 1 EITGIGPSTTTETETIAK Unmodified 1847.9364 0.93640328 498 O75436 VPS26A Vacuolar protein sorting-associated protein 26A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.65 3.66 1 3 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 65.859 64.902 2 6.4115E-59 77513 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 189.5 165.65 1359200000 91992000 1032400000 2831800 11205000 7565500 11781000 10207000 13100000 7131000 14198000 29884000 28782000 12221000 17521000 68444000 12241 498 11171 104037;104038;104039;104040;104041;104042;104043;104044;104045;104046;104047;104048;104049;104050;104051;104052;104053 83309;83310;83311;83312;83313;83314;83315;83316;83317;83318;83319;83320;83321;83322;83323;83324;83325;83326 83313 18 EITGSSLIQK Unmodified 1074.5921 0.59208927 3194 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 yes yes 0 0 0 By MS/MS 2 0 1 1 49.562 43.856 2 0.0029793 57064 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.933 38.285 76568000 0 76568000 0 0 0 0 0 0 0 0 0 0 0 0 0 12242 3194 11172 104054 83327;83328 83327 2 EITKPLRPLGK Unmodified 1250.7711 0.77105669 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.969 33.154 3 0.041325 36182 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 53.567 38.468 133200000 0 0 0 8004300 9381100 8307200 9720000 19032000 4709800 10442000 9977000 15268000 14497000 13073000 10786000 12243 2102 11173 104055;104056;104057;104058;104059;104060;104061;104062;104063;104064;104065;104066 83329 83329 0 EITLENK Unmodified 845.44945 0.44944778 4632 Q9NT62 ATG3 Ubiquitin-like-conjugating enzyme ATG3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 25.022 24.801 2 0.019153 31515 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.59 45.493 444110000 0 296910000 0 0 9334200 14655000 0 0 0 18751000 17981000 17464000 23454000 16665000 28896000 12244 4632 11174 104067;104068;104069;104070;104071;104072;104073;104074;104075 83330;83331;83332;83333;83334 83331 4 EITMSQAYQNMCAGMFK 3 Oxidation (M) 2056.8363 0.83625377 2831 Q5VZE5 NAA35 N-alpha-acetyltransferase 35, NatC auxiliary subunit yes yes 0 3 0 By MS/MS 10 0 1 1 45.479 46.231 2 0.0014721 51499 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.004 42.28 5082100 0 0 0 0 0 0 0 0 0 0 0 5082100 0 0 0 12245 2831 11175 104076 83335 83335 4480;4481;4482 1 EITNLEEQLEQFREELENK Unmodified 2390.1601 0.16014863 4077 Q99996 AKAP9 A-kinase anchor protein 9 yes yes 0 0 1 By MS/MS 2 0 1 1 98.116 89.986 3 6.8119E-72 116157 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 156.67 135.01 12587000 12587000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12246 4077 11176 104077 83336 83336 1 EITNQVVPQER Unmodified 1311.6783 0.67827852 4696 Q9NWF9 RNF216 E3 ubiquitin-protein ligase RNF216 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 39.58 39.84 2 0.0040546 44324 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 73.985 43.731 31813000 0 0 0 2568800 0 2924800 2828400 0 0 3758600 3769200 4246200 3714300 2826600 5175800 12247 4696 11177 104078;104079;104080;104081;104082;104083;104084;104085;104086 83337;83338;83339;83340;83341 83338 5 EITQEMQTLK Oxidation (M) 1235.6068 0.60675306 3894 Q96JI7 SPG11 Spatacsin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 43.855 43.526 2 0.015251 48800 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 45.68 26.898 9165400 0 0 0 3702500 2078800 0 3384000 0 0 0 0 0 0 0 0 12248 3894 11178 104087;104088;104089 83342 83342 5396 1 EITRQLNLENVVGDK Unmodified 1726.9214 0.92136233 380 O43929;CON__Q2YDI2 ORC4 Origin recognition complex subunit 4 yes no 0 0 1 By MS/MS 2 0 1 1 73.976 71.024 3 7.2397E-05 86772 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 76.82 51.102 10508000 0 0 10508000 0 0 0 0 0 0 0 0 0 0 0 0 12249 380 11179 104090 83343 83343 1 EITSLHER Unmodified 983.50361 0.50360861 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 16.764 16.955 2 0.0099856 16658 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 81.119 45.918 116530000 0 0 0 5293400 6850100 0 10209000 5464400 7443500 9966600 15944000 18843000 14917000 0 21594000 12250 965 11180 104091;104092;104093;104094;104095;104096;104097;104098;104099;104100 83344;83345;83346;83347;83348 83348 5 EITSVGSSK Unmodified 906.46583 0.46582612 4916 Q9UI10 EIF2B4 Translation initiation factor eIF-2B subunit delta yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 14.907 11.226 2 0.0098298 14904 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.14 62.069 43936000 321830 43614000 0 0 0 0 0 0 0 0 0 0 0 0 0 12251 4916 11181 104101;104102 83349 83349 0 EITTEGQVQVLK Unmodified 1343.7296 0.72964538 4919 Q9UI26 IPO11 Importin-11 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 8.23 3.24 2 1 10 2 1 1 1 1 1 1 1 1 1 1 1 54.189 52.327 2 0.00062665 66512 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 111.61 75.273 272980000 17321000 227110000 0 1769300 1770500 0 0 2968100 2072900 0 0 5806700 3274200 0 10883000 12252 4919 11182 104103;104104;104105;104106;104107;104108;104109;104110;104111;104112;104113;104114;104115 83350;83351;83352;83353;83354;83355;83356;83357;83358 83352 8 EITTMADRINLPR Oxidation (M) 1544.7981 0.79807608 2034 Q00403 GTF2B Transcription initiation factor IIB yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 55.409 55.538 3 0.0050986 63052 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 40.552 28.759 15062000 0 0 0 0 0 0 7775100 0 7287200 0 0 0 0 0 0 12253 2034 11183 104116;104117;104118 83359;83360;83361 83359 3293 3 EITWQTLR Unmodified 1045.5556 0.55564418 2867 Q6BDS2 UHRF1BP1 UHRF1-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.267 66.352 2 0.0053152 75231 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.32 69.672 80529000 0 0 0 3808900 4622200 5220700 5931300 7175700 3660900 6259600 10567000 7481800 8057900 7555300 10187000 12254 2867 11184 104119;104120;104121;104122;104123;104124;104125;104126;104127;104128;104129;104130 83362;83363;83364;83365;83366;83367;83368;83369;83370;83371 83364 10 EITYMHSEGILAGELK Oxidation (M) 1805.887 0.88695066 2125;588 Q06210;O94808 GFPT1;GFPT2 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1;Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 no no 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 75.564 70.023 3 0.00047497 86352 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 60.474 41.151 51901000 25629000 0 26273000 0 0 0 0 0 0 0 0 0 0 0 0 12255 2125;588 11185 104131;104132 83372;83373 83373 745 2 EITYMHSEGILAGELK Unmodified 1789.892 0.89203604 2125;588 Q06210;O94808 GFPT1;GFPT2 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1;Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 no no 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 79.635 77.061 3 5.6415E-05 97621 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.983 56.066 12058000 0 0 12058000 0 0 0 0 0 0 0 0 0 0 0 0 12256 2125;588 11185 104133;104134 83374;83375;83376 83374 3 EITYRASNIK Unmodified 1193.6404 0.64043645 5231 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 0 1 By MS/MS By MS/MS By matching 2 0 4 2 1 1 33.919 28.776 2;3 8.7706E-05 40293 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 140.75 62.419 448930000 411380000 26078000 11471000 0 0 0 0 0 0 0 0 0 0 0 0 12257 5231 11186 104135;104136;104137;104138 83377;83378 83378 0 EIVAEAERLDVK Unmodified 1370.7405 0.74054442 1751 P55010 EIF5 Eukaryotic translation initiation factor 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.8 4 1 8 2 1 2 1 1 1 1 1 1 1 1 57.014 54.777 2;3 4.5304E-14 74495 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 146.11 79.415 267570000 64138000 65128000 69367000 7247300 6928100 6341400 7135000 9496400 7757200 10028000 14002000 0 0 0 0 12258 1751 11187 104139;104140;104141;104142;104143;104144;104145;104146;104147;104148;104149;104150;104151 83379;83380;83381;83382;83383 83381 4 EIVDPLYGIAEVEIPNIQK Unmodified 2139.1463 0.14633647 2861 Q68EM7 ARHGAP17 Rho GTPase-activating protein 17 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 98.129 94.108 3 0.0021653 116147 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 46.514 42.966 27743000 0 27743000 0 0 0 0 0 0 0 0 0 0 0 0 0 12259 2861 11188 104152;104153 83384;83385 83384 1 EIVDSYLPVILDIIK Unmodified 1728.9913 0.99133938 844 P07602 PSAP Prosaposin;Saposin-A;Saposin-B-Val;Saposin-B;Saposin-C;Saposin-D yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 103.67 97.237 2 0.00061699 122528 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 99.215 79.972 8837200 5550400 3286800 0 0 0 0 0 0 0 0 0 0 0 0 0 12260 844 11189 104154;104155 83386;83387 83387 2 EIVEMNEIEEGK Unmodified 1418.6599 0.65991084 4365 Q9H2G2 SLK STE20-like serine/threonine-protein kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 1 1 1 1 1 1 1 1 1 1 1 1 61.485 60.311 2 1.7066E-09 78365 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 121.83 87.443 104150000 18322000 7854100 0 4161100 6584400 8410800 7269000 7913300 0 11409000 0 12026000 9189300 11011000 0 12261 4365 11190 104156;104157;104158;104159;104160;104161;104162;104163;104164;104165;104166;104167 83388;83389;83390;83391;83392;83393;83394;83395;83396;83397;83398;83399 83394 12 EIVEMNEIEEGK Oxidation (M) 1434.6548 0.65482546 4365 Q9H2G2 SLK STE20-like serine/threonine-protein kinase yes yes 0 1 0 By MS/MS 2.67 0.471 1 2 3 43.096 38.198 2 0.0011815 49485 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.53 92.414 41044000 0 41044000 0 0 0 0 0 0 0 0 0 0 0 0 0 12262 4365 11190 104168;104169;104170 83400;83401;83402 83400 5822 1 EIVEPELSIEVCEEK Unmodified 1801.8655 0.86554652 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 83.029 74.898 2 0.00088761 98009 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 99.671 65.801 7507000 7507000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12263 2361 11191 104171;104172;104173 83403;83404;83405 83405 3 EIVERWSETQNVVTK Unmodified 1816.9319 0.93192702 3927 Q96MW1 CCDC43 Coiled-coil domain-containing protein 43 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 62.917 56.882 3 0.0036343 70986 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 84.842 66.478 22407000 10646000 0 11761000 0 0 0 0 0 0 0 0 0 0 0 0 12264 3927 11192 104174;104175 83406;83407;83408 83408 2 EIVESCDLK Unmodified 1091.5169 0.51687542 614 O94979 SEC31A Protein transport protein Sec31A yes yes 0 0 0 By MS/MS 10 0 1 1 34.826 35.134 2 0.038884 37635 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 63.48 32.406 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12265 614 11193 104176 83409 83409 1 EIVETFANK Unmodified 1049.5393 0.53932542 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.86 3.4 1 1 5 2 1 1 1 1 1 45.894 44.313 2 0.012004 48947 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.962 35.079 127880000 0 88269000 0 0 0 4945800 0 8881700 13355000 0 0 0 0 0 12428000 12266 1601 11194 104177;104178;104179;104180;104181;104182;104183 83410;83411;83412;83413;83414;83415 83411 6 EIVEVKEENIEDATEK Unmodified 1873.9157 0.91566783 2003 P82970 HMGN5 High mobility group nucleosome-binding domain-containing protein 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 3.8 3.12 3 1 1 1 2 1 1 57.011 52.591 3 0.00032301 59803 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.281 43.942 141180000 66158000 56899000 8216400 0 0 0 0 0 0 0 0 0 0 0 9901500 12267 2003 11195 104184;104185;104186;104187;104188 83416;83417;83418;83419 83417 4 EIVHIQAGQCGNQIGTK Unmodified 1851.9261 0.92613014 4160 Q9BUF5 TUBB6 Tubulin beta-6 chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 46.053 46.222 3 0.003605 52087 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 38.723 34.552 213730000 0 0 0 18831000 13337000 23025000 19980000 0 11156000 23412000 19333000 24408000 26028000 16307000 17917000 12268 4160 11196 104189;104190;104191;104192;104193;104194;104195;104196;104197;104198;104199 83420;83421 83421 2 EIVHLQAGQCGNQIGAK Unmodified 1821.9156 0.91556545 1963 P68371 TUBB4B Tubulin beta-4B chain no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.4 2.07 3 1 48 2 1 1 4 4 4 4 4 4 4 4 4 4 4 4 47.018 46.846 2;3 4.5749E-183 52270 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 256.52 0 9258100000 8050800 4603300 7134300 439830000 456630000 817110000 553420000 540690000 477230000 1064000000 940370000 1084700000 980920000 701400000 1182000000 12269 1963 11197 104200;104201;104202;104203;104204;104205;104206;104207;104208;104209;104210;104211;104212;104213;104214;104215;104216;104217;104218;104219;104220;104221;104222;104223;104224;104225;104226;104227;104228;104229;104230;104231;104232;104233;104234;104235;104236;104237;104238;104239;104240;104241;104242;104243;104244;104245;104246;104247;104248;104249;104250;104251 83422;83423;83424;83425;83426;83427;83428;83429;83430;83431;83432;83433;83434;83435;83436;83437;83438;83439;83440;83441;83442;83443;83444;83445;83446;83447;83448;83449;83450;83451;83452;83453 83431 31 EIVHTFK Unmodified 872.4756 0.47560295 3467 Q8NI36 WDR36 WD repeat-containing protein 36 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 29.955 25.542 2 0.031008 32397 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 90.986 28.271 29116000 14917000 0 14199000 0 0 0 0 0 0 0 0 0 0 0 0 12270 3467 11198 104252;104253 83454;83455 83455 2 EIVLADVIDNDSWR Unmodified 1643.8155 0.81550028 1135 P22234 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 2 89.82 89.962 2;3 3.1692E-12 104104 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 122.51 102.3 13203000 0 0 0 0 0 0 0 0 0 0 2058000 1508600 0 1077000 8559400 12271 1135 11199 104254;104255;104256;104257;104258 83456;83457;83458;83459;83460;83461 83456 5 EIVLEDLK Unmodified 957.53826 0.53826279 3509 Q8TDY2 RB1CC1 RB1-inducible coiled-coil protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 65.441 65.984 2 0.022922 74962 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.76 8.5288 4080400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4080400 12272 3509 11200 104259 83462 83462 1 EIVLQLEK Unmodified 970.5699 0.56989727 4385 Q9H3R5 CENPH Centromere protein H yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 63.525 63.793 2 0.010849 72950 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 78.324 36.431 19527000 0 0 0 0 0 0 0 2662100 0 0 5406200 5520900 3337500 2600300 0 12273 4385 11201 104260;104261;104262;104263;104264;104265 83463;83464;83465;83466;83467;83468 83464 6 EIVNPDGFDVLR Unmodified 1372.6987 0.69867961 5015 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B yes yes 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 81.045 81.034 2 0.033439 93809 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 36.334 14.87 5878500 0 0 0 0 1197700 0 0 0 0 0 0 3228700 1452000 0 0 12274 5015 11202 104266;104267;104268 83469 83469 1 EIVNSEECIINEITGEESVK Unmodified 2291.0839 0.083872149 652 O95391 SLU7 Pre-mRNA-splicing factor SLU7 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 91.545 87.483 2 0.00074108 108753 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 59.171 45.426 13330000 0 13330000 0 0 0 0 0 0 0 0 0 0 0 0 0 12275 652 11203 104269;104270 83470 83470 1 EIVPVLVSTR Unmodified 1111.6601 0.66010926 4207 Q9BWD1 ACAT2 Acetyl-CoA acetyltransferase, cytosolic yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 73.945 74.051 2 0.011018 84641 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.982 36.542 44358000 0 0 0 4003800 0 0 1794000 0 1455100 0 6884800 7452700 0 6210300 16557000 12276 4207 11204 104271;104272;104273;104274;104275;104276;104277 83471;83472;83473;83474;83475 83471 5 EIVPVLVSTRK Unmodified 1239.7551 0.75507227 4207 Q9BWD1 ACAT2 Acetyl-CoA acetyltransferase, cytosolic yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 2 20 2 2 1 2 1 1 1 2 2 2 1 2 3 61.745 61.13 2;3 0.00075184 85409 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.048 73.273 473510000 239010000 0 0 11493000 3495400 9283700 5814300 6897200 3811600 9821400 29211000 39500000 5236900 25866000 84072000 12277 4207 11205 104278;104279;104280;104281;104282;104283;104284;104285;104286;104287;104288;104289;104290;104291;104292;104293;104294;104295;104296;104297;104298;104299 83476;83477;83478;83479;83480;83481;83482;83483;83484;83485;83486;83487;83488;83489 83482 8 EIVPYNMAHNAEHEACDLLMEIEQVDMLEK Unmodified 3570.6139 0.61391198 2252 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 100.18 94.414 4 1.6628E-15 119308 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.647 66.07 39658000 31617000 8040400 0 0 0 0 0 0 0 0 0 0 0 0 0 12278 2252 11206 104300;104301 83490;83491 83491 2 EIVPYNMAHNAEHEACDLLMEIEQVDMLEK 2 Oxidation (M) 3602.6037 0.60374123 2252 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 0 2 0 By MS/MS 2 0 1 1 100.06 91.932 4 3.075E-06 118426 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.31 37.53 26154000 26154000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12279 2252 11206 104302 83492;83493 83493 3661;3662;3663 2 EIVPYNMAHNAEHEACDLLMEIEQVDMLEK Oxidation (M) 3586.6088 0.60882661 2252 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 0 1 0 By MS/MS 2 0 2 2 100.39 92.258 4 1.8098E-35 118679 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 92.121 86.461 68664000 68664000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12280 2252 11206 104303;104304 83494;83495 83494 3661;3662;3663 1 EIVRDLDQDGDK Unmodified 1401.6736 0.67358707 4110 Q9BRK5 SDF4 45 kDa calcium-binding protein yes yes 0 0 1 By MS/MS 2 0 1 1 36.332 29.903 2 0.017932 41929 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.695 55.934 6955700 6955700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12281 4110 11207 104305 83496 83496 0 EIVRGYK Unmodified 863.4865 0.48650199 4613 Q9NRX4 PHPT1 14 kDa phosphohistidine phosphatase yes yes 0 0 1 By MS/MS By matching By MS/MS 2 0 3 1 1 1 19.689 16.063 2 0.045991 23388 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 146.94 77.555 402260000 343120000 26926000 32210000 0 0 0 0 0 0 0 0 0 0 0 0 12282 4613 11208 104306;104307;104308 83497 83497 0 EIVSGMK Oxidation (M) 778.38949 0.38949006 1689 P52565 ARHGDIA Rho GDP-dissociation inhibitor 1 yes yes 0 1 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 8.2575 8.4083 2 0.042289 5891 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.683 17.578 23263000 0 0 0 0 0 1177000 1231400 0 0 2610800 0 4484300 3049000 0 10711000 12283 1689 11209 104309;104310;104311;104312;104313;104314 83498 83498 1 EIVSLIEAQTAK Unmodified 1300.7238 0.72383172 602 O94913 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 78.12 74.013 2 2.0444E-14 92478 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 142.83 113.67 80758000 0 80758000 0 0 0 0 0 0 0 0 0 0 0 0 0 12284 602 11210 104315;104316 83499;83500 83499 2 EIVSSTRLDLQK Unmodified 1387.7671 0.76709352 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 53.39 49.155 2;3 0.0030495 61545 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 93.096 55.54 28043000 0 5224800 22819000 0 0 0 0 0 0 0 0 0 0 0 0 12285 2495 11211 104317;104318;104319 83501;83502;83503 83503 2 EIVTDKQDALDFKK Unmodified 1648.8672 0.8672015 4752 Q9NYV4 CDK12 Cyclin-dependent kinase 12 yes yes 0 0 2 By MS/MS By MS/MS By matching 10 0 3 1 1 1 46.14 46.236 3 0.033429 51945 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 45.825 35.191 12408000 0 0 0 0 3063900 0 5716200 0 0 0 0 3628400 0 0 0 12286 4752 11212 104320;104321;104322 83504 83504 1 EIVTNFLAGFEA Unmodified 1309.6554 0.65541781 1192 P25705 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 98.61 94.588 2 0.01229 116598 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.168 66.71 29111000 0 29111000 0 0 0 0 0 0 0 0 0 0 0 0 0 12287 1192 11213 104323;104324 83505 83505 1 EIVVGSNMDK Unmodified 1090.5329 0.53285983 1118;5069 P21127;Q9UQ88 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 36.417 36.547 2 0.00164 40305 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 104.2 43.516 62884000 0 0 0 4829200 3874900 4720100 3239800 5172000 3611500 6975400 7224200 10834000 6054700 6348100 0 12288 1118;5069 11214 104325;104326;104327;104328;104329;104330;104331;104332;104333;104334;104335 83506;83507;83508;83509;83510;83511;83512;83513;83514;83515 83507 10 EIVVIHQDPEALK Unmodified 1489.814 0.81404372 1441 P41252 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.26 3.23 5 2 24 3 2 2 2 2 2 2 2 2 2 2 2 2 2 2 59.748 58.487 2;3 8.4709E-12 72118 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 120.06 100.79 915260000 77775000 50328000 45250000 34534000 43827000 68581000 45546000 35443000 40879000 68021000 69742000 85856000 54215000 67725000 127530000 12289 1441 11215 104336;104337;104338;104339;104340;104341;104342;104343;104344;104345;104346;104347;104348;104349;104350;104351;104352;104353;104354;104355;104356;104357;104358;104359;104360;104361;104362;104363;104364;104365;104366 83516;83517;83518;83519;83520;83521;83522;83523;83524;83525;83526;83527;83528;83529;83530;83531;83532;83533;83534;83535;83536;83537;83538;83539;83540;83541;83542;83543 83525 20 EIVVLETLEDIDK Unmodified 1514.808 0.80795528 2515 Q15293 RCN1 Reticulocalbin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3.38 3.45 9 8 2 5 13 4 2 1 1 1 1 1 98.76 97.414 2 5.1826E-37 110375 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 185.77 158.47 3366900000 3119600000 172130000 46996000 0 0 0 0 0 0 2835200 4510600 2866900 0 2509000 15431000 12290 2515 11216 104367;104368;104369;104370;104371;104372;104373;104374;104375;104376;104377;104378;104379;104380;104381;104382;104383;104384;104385;104386;104387;104388;104389;104390 83544;83545;83546;83547;83548;83549;83550;83551;83552;83553;83554;83555;83556;83557;83558;83559;83560;83561;83562;83563;83564;83565;83566;83567;83568;83569;83570;83571;83572;83573 83552 26 EIVVTDYSDQNLQELEK Unmodified 2021.9793 0.97933072 1411 P40261 NNMT Nicotinamide N-methyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 77.793 76.758 2 8.7672E-256 89262 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 301.16 275.68 932010000 36698000 624580000 0 3622600 10484000 33921000 17591000 13017000 11064000 36816000 28413000 32859000 12929000 20111000 49903000 12291 1411 11217 104391;104392;104393;104394;104395;104396;104397;104398;104399;104400;104401;104402;104403;104404;104405 83574;83575;83576;83577;83578;83579;83580;83581;83582;83583;83584;83585;83586;83587;83588 83575 15 EIYDQFGEEGLK Unmodified 1426.6616 0.6616254 4868 Q9UDY4 DNAJB4 DnaJ homolog subfamily B member 4 yes yes 0 0 0 By MS/MS 10 0 1 1 67.233 67.751 2 0.0048774 77062 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.726 49.862 7318400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7318400 12292 4868 11218 104406 83589;83590 83589 2 EIYEESSTWK Unmodified 1270.5717 0.57174776 713 O96007 MOCS2 Molybdopterin synthase catalytic subunit yes yes 0 0 0 By MS/MS 2 0 1 1 49.761 44.054 2 0.02329 57233 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.582 55.102 61466000 0 61466000 0 0 0 0 0 0 0 0 0 0 0 0 0 12293 713 11219 104407 83591 83591 1 EIYENMAPGENK Oxidation (M) 1409.6133 0.613295 2252 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.87 3.56 1 2 1 11 2 2 1 1 1 1 1 1 1 1 1 1 1 32.133 31.682 2 1.9359E-07 93043 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 118.81 106.52 517730000 58570000 172560000 0 19575000 22646000 32418000 11239000 0 9383900 37450000 56896000 56306000 14348000 11188000 15150000 12294 2252 11220 104408;104409;104410;104411;104412;104413;104414;104415;104416;104417;104418;104419;104420;104421;104422 83592;83593;83594;83595;83596;83597;83598;83599;83600;83601;83602;83603;83604 83599 3664 13 EIYENMAPGENK Unmodified 1393.6184 0.61838038 2252 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 41.329 40.352 2 2.3745E-43 45108 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 182.16 169.37 1023900000 24644000 482140000 0 29917000 36121000 46127000 20967000 20811000 15262000 69487000 84846000 82125000 20226000 26764000 64506000 12295 2252 11220 104423;104424;104425;104426;104427;104428;104429;104430;104431;104432;104433;104434;104435;104436;104437 83605;83606;83607;83608;83609;83610;83611;83612;83613;83614;83615;83616;83617;83618;83619;83620;83621 83615 17 EIYHFTLEK Unmodified 1178.5972 0.59717465 4137 Q9BT78 COPS4 COP9 signalosome complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 6.9 3.81 6 2 12 4 2 2 1 1 1 1 1 1 1 1 1 1 1 1 63.35 61.018 2;3 0.0022225 83144 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.111 78.904 419910000 118890000 25498000 90281000 6659100 5028900 15634000 8773500 9098800 7763000 21682000 18846000 19323000 16086000 17319000 39027000 12296 4137 11221 104438;104439;104440;104441;104442;104443;104444;104445;104446;104447;104448;104449;104450;104451;104452;104453;104454;104455;104456;104457 83622;83623;83624;83625;83626;83627;83628;83629;83630;83631;83632 83627 9 EIYNQVNVVLK Unmodified 1317.7293 0.72925145 4654 Q9NUQ9 FAM49B Protein FAM49B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 6.83 3.76 3 2 7 1 3 1 1 1 1 1 1 1 1 73.026 71.441 2 0.0020632 85703 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 112.94 84.542 657980000 1556800 620600000 12196000 0 0 2990900 1461000 0 1366400 3485000 0 4313800 0 2928000 7076500 12297 4654 11222 104458;104459;104460;104461;104462;104463;104464;104465;104466;104467;104468;104469 83633;83634;83635;83636;83637 83636 1 EIYRTMNISPEQPQH Unmodified 1841.873 0.87303193 5301 Q9Y6Y8 SEC23IP SEC23-interacting protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 58.632 52.657 3 0.03481 71026 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 32.53 26.367 68305000 9388900 32724000 26192000 0 0 0 0 0 0 0 0 0 0 0 0 12298 5301 11223 104470;104471;104472 83638 83638 1 EIYRTMNISPEQPQH Oxidation (M) 1857.8679 0.86794655 5301 Q9Y6Y8 SEC23IP SEC23-interacting protein yes yes 0 1 1 By MS/MS 2 0 1 1 42.831 39.109 3 0.0044715 49287 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 52.823 46.768 23328000 0 0 23328000 0 0 0 0 0 0 0 0 0 0 0 0 12299 5301 11223 104473 83639 83639 6702 1 EIYTHFTCATDTK Unmodified 1585.7083 0.70825802 872;790 P04899;P08754 GNAI2;GNAI3 Guanine nucleotide-binding protein G(i) subunit alpha-2;Guanine nucleotide-binding protein G(k) subunit alpha no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 47.329 45.821 3 0.0086079 60650 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 57.095 52.204 166000000 5630700 44258000 27755000 5641000 4657600 0 6532500 6589300 4134900 11263000 0 17012000 8344500 8766200 15416000 12300 790;872 11224 104474;104475;104476;104477;104478;104479;104480;104481;104482;104483;104484;104485;104486;104487 83640;83641;83642;83643;83644;83645;83646 83640 6 EIYTNLGPR Unmodified 1061.5506 0.55055881 3701;164 O00507;Q93008 USP9Y;USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-Y;Probable ubiquitin carboxyl-terminal hydrolase FAF-X no no 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 47.278 47.68 2 0.011979 53784 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 61.999 29.857 39116000 0 0 0 0 0 15754000 0 0 0 0 0 23362000 0 0 0 12301 164;3701 11225 104488;104489;104490 83647;83648;83649 83647 3 EIYYHGEPISVNVHVTNNTNK Unmodified 2427.1819 0.18188713 1571 P49407 ARRB1 Beta-arrestin-1 yes yes 0 0 0 By MS/MS 2 0 1 1 73.664 65.468 4 0.002288 86807 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 41.711 34.265 12824000 12824000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12302 1571 11226 104491 83650 83650 1 EKAQAVEQQAK Unmodified 1228.6412 0.64116473 2195 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 19.955 20.16 3 0.016515 19416 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.523 10.53 51270000 0 0 0 1917700 1640400 5014000 1631700 0 1595200 5246900 10253000 6382900 3484800 4289500 9814600 12303 2195 11227 104492;104493;104494;104495;104496;104497;104498;104499;104500;104501;104502 83651;83652;83653 83651 3 EKDEMVEQEFNR Unmodified 1552.6828 0.68277155 397 O60341 KDM1A Lysine-specific histone demethylase 1A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 2 1 2 39.698 39.936 2;3 0.00047163 44390 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 75.739 72.421 145890000 0 0 0 8551100 7994500 9371500 8018000 13329000 0 10992000 12814000 13354000 15759000 14571000 31139000 12304 397 11228 104503;104504;104505;104506;104507;104508;104509;104510;104511;104512;104513;104514;104515 83654;83655;83656;83657;83658;83659;83660;83661;83662;83663;83664 83659 10 EKDEVAVETTTPQQNK Unmodified 1815.885 0.88503641 316 O43310 CTIF CBP80/20-dependent translation initiation factor yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 28.741 24.415 3 0.0092437 32162 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 25.44 17.659 12325000 0 12325000 0 0 0 0 0 0 0 0 0 0 0 0 0 12305 316 11229 104516;104517 83665 83665 1 EKDPEIFCDPFTSATTTTNK Unmodified 2301.0471 0.047092712 1457 P42566 EPS15 Epidermal growth factor receptor substrate 15 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 81.649 77.631 3 0.00044003 92889 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 48.616 46.219 34338000 0 34338000 0 0 0 0 0 0 0 0 0 0 0 0 0 12306 1457 11230 104518;104519 83666 83666 1 EKDVSEYFYEK Unmodified 1435.6507 0.65072636 2808 Q5VT06 CEP350 Centrosome-associated protein 350 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 37.602 37.756 3 0.020223 42421 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 38.783 20.646 142940000 0 0 0 9972000 8769600 11729000 9124200 15073000 8224100 16206000 0 15657000 19969000 11925000 16294000 12307 2808 11231 104520;104521;104522;104523;104524;104525;104526;104527;104528;104529;104530 83667;83668 83668 2 EKEDDEEEEDEDASGGDQDQEERR Unmodified 2838.082 0.081970486 382 O60216 RAD21 Double-strand-break repair protein rad21 homolog yes yes 0 0 2 By matching By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 13.128 13.337 4 1.852E-05 12116 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.904 42.904 10383000 0 0 0 0 1660500 0 0 0 0 0 0 2809500 2023500 0 3889500 12308 382 11232 104531;104532;104533;104534 83669 83669 1 EKEDDVPQFTSAGENFDK Unmodified 2054.9069 0.90689406 1240 P28838 LAP3 Cytosol aminopeptidase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 65.449 59.774 3 3.5761E-14 79333 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.56 96.732 108980000 17743000 86133000 5104100 0 0 0 0 0 0 0 0 0 0 0 0 12309 1240 11233 104535;104536;104537;104538 83670;83671;83672;83673;83674 83672 5 EKEEADLLLEQQR Unmodified 1599.8104 0.8104149 378;396 O43896;O60333 KIF1C;KIF1B Kinesin-like protein KIF1C;Kinesin-like protein KIF1B no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 51.845 51.964 3 0.0025893 59111 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 51.726 38.607 84809000 0 0 0 7281100 8921800 0 7897500 0 8601600 0 0 19124000 10271000 9556600 13155000 12310 378;396 11234 104539;104540;104541;104542;104543;104544;104545;104546 83675;83676;83677;83678;83679;83680 83675 6 EKEEEEEEKPK Unmodified 1402.6464 0.64636926 2117 Q05682 CALD1 Caldesmon yes yes 0 0 2 By matching By MS/MS By MS/MS 2 0 3 1 1 1 5.6922 2.7513 3 0.00088795 5002 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 93.345 77.958 99887000 33547000 55613000 10727000 0 0 0 0 0 0 0 0 0 0 0 0 12311 2117 11235 104547;104548;104549 83681;83682 83682 2 EKEEEELFPESERPEMLSEQEHMSISGSSAR Oxidation (M) 3622.6039 0.60393546 4912 Q9UHX1 PUF60 Poly(U)-binding-splicing factor PUF60 yes yes 0 1 2 By MS/MS 2 0 1 1 76.032 67.902 4 2.6085E-12 89581 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 59.598 53.022 20165000 20165000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12312 4912 11236 104550 83683 83683 6268 1 EKEEEELFPESERPEMLSEQEHMSISGSSAR Unmodified 3606.609 0.60902084 4912 Q9UHX1 PUF60 Poly(U)-binding-splicing factor PUF60 yes yes 0 0 2 By MS/MS 2 0 2 2 79.823 71.693 4;5 7.3836E-11 94246 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.073 48.629 46220000 46220000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12313 4912 11236 104551;104552 83684;83685 83685 2 EKEEEELMEKPQK Oxidation (M) 1661.7818 0.78181689 2236 Q13123 IK Protein Red yes yes 0 1 2 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 14.284 14.465 3 0.0075716 13472 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 51.463 33.39 40221000 0 0 0 4773700 2984500 0 3279400 2846600 2220600 3714600 4391500 6663700 2646900 2146100 4553100 12314 2236 11237 104553;104554;104555;104556;104557;104558;104559;104560;104561;104562;104563 83686;83687;83688 83687 3632 3 EKEEEEVRQQALLAK Unmodified 1798.9425 0.94249171 4021 Q99543 DNAJC2 DnaJ homolog subfamily C member 2;DnaJ homolog subfamily C member 2, N-terminally processed yes yes 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 42.697 37.459 3 0.0046683 47516 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 85.837 74.576 51138000 19269000 0 31869000 0 0 0 0 0 0 0 0 0 0 0 0 12315 4021 11238 104564;104565 83689;83690 83690 1 EKEEFAVPENSSVQQFK Unmodified 1994.9585 0.9585357 4899;5018 Q9UHD9;Q9UMX0 UBQLN2;UBQLN1 Ubiquilin-2;Ubiquilin-1 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.35 3.66 6 3 17 4 4 1 1 1 1 1 1 1 1 2 2 2 2 2 63.279 61.919 2;3 4.328E-83 70523 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 184 174.21 1506900000 20404000 408330000 11309000 57863000 58676000 30475000 72953000 105100000 48561000 73374000 129010000 133900000 91897000 81974000 183100000 12316 4899;5018 11239 104566;104567;104568;104569;104570;104571;104572;104573;104574;104575;104576;104577;104578;104579;104580;104581;104582;104583;104584;104585;104586;104587;104588;104589;104590;104591 83691;83692;83693;83694;83695;83696;83697;83698;83699;83700;83701;83702;83703;83704;83705;83706;83707;83708;83709;83710;83711;83712 83694 20 EKEELEEIRQR Unmodified 1457.7474 0.74742071 1596 P49756 RBM25 RNA-binding protein 25 yes yes 0 0 2 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 25.422 25.563 3 0.011392 27251 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 77.744 54.695 171540000 0 0 0 17030000 13539000 7585400 22672000 16112000 13088000 19481000 18866000 0 15820000 0 27347000 12317 1596 11240 104592;104593;104594;104595;104596;104597;104598;104599;104600;104601;104602 83713;83714 83713 2 EKEEVAEEAQSGGD Unmodified 1476.6216 0.62161108 574 O76070 SNCG Gamma-synuclein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.47 3.93 3 2 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 31.903 31.978 2 4.6614E-154 15260 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 218.75 212.72 2019100000 162610000 292330000 0 75987000 97073000 30825000 114680000 46888000 45826000 88805000 216570000 198080000 128160000 208720000 312580000 12318 574 11241 104603;104604;104605;104606;104607;104608;104609;104610;104611;104612;104613;104614;104615;104616;104617;104618;104619 83715;83716;83717;83718;83719;83720;83721;83722;83723;83724;83725;83726;83727;83728;83729;83730;83731 83729 16 EKFEEMIQQIK Oxidation (M) 1437.7174 0.71736614 1548 P48643 CCT5 T-complex protein 1 subunit epsilon yes yes 0 1 1 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 2 1 2 1 2 2 2 48.959 49.247 2;3 2.5852E-06 56030 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 145.99 115.42 309400000 0 0 0 10370000 0 15477000 43477000 0 28821000 46243000 13750000 68953000 53062000 0 29245000 12319 1548 11242 104620;104621;104622;104623;104624;104625;104626;104627;104628;104629;104630;104631;104632;104633 83732;83733;83734;83735;83736;83737;83738 83733 2462 5 EKFEEMIQQIK Unmodified 1421.7225 0.72245152 1548 P48643 CCT5 T-complex protein 1 subunit epsilon yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 7.6 3.67 3 7 1 2 1 1 1 1 1 2 73.256 71.686 2;3 2.7237E-16 91954 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 192.44 166.82 263560000 17659000 206170000 0 0 0 0 0 3212700 0 3645700 3647300 4583200 2283100 0 22360000 12320 1548 11242 104634;104635;104636;104637;104638;104639;104640;104641;104642;104643 83739;83740;83741;83742;83743 83740 3 EKLPGELEPVQATQNK Unmodified 1779.9367 0.93667805 546 O75821 EIF3G Eukaryotic translation initiation factor 3 subunit G yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching 7.5 3.55 1 1 4 2 1 1 1 1 53.053 51.901 3 0.0070103 65011 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 45.084 33.169 36270000 0 4652000 0 0 8193600 0 8810800 0 0 0 0 14614000 0 0 0 12321 546 11243 104644;104645;104646;104647;104648;104649 83744;83745;83746;83747;83748 83746 5 EKNQLEAQLK Unmodified 1199.651 0.65100113 2808 Q5VT06 CEP350 Centrosome-associated protein 350 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 28.388 28.536 3 0.011276 30494 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 49.35 22.678 56999000 0 0 0 7352300 3990200 0 4658700 14364000 0 0 7142300 12467000 7024700 0 0 12322 2808 11244 104650;104651;104652;104653;104654;104655;104656 83749;83750;83751;83752 83751 3 EKPAAVATAMAR Unmodified 1214.6441 0.64414162 4669 Q9NVI1 FANCI Fanconi anemia group I protein yes yes 0 0 1 By MS/MS 10 0 1 1 29.993 30.705 3 0.0444 32791 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 22.321 0 9994800 0 0 0 0 0 0 0 0 0 0 0 9994800 0 0 0 12323 4669 11245 104657 83753 83753 1 EKPDQDAEGKAEEK Unmodified 1572.7267 0.72674485 1993 P80723 BASP1 Brain acid soluble protein 1 yes yes 0 0 2 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.3873 6.5122 3 1.4001E-21 3840 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 148.7 126.79 521070000 0 0 0 22683000 28455000 11974000 35466000 19755000 14367000 29848000 73694000 108550000 46146000 52577000 77552000 12324 1993 11246 104658;104659;104660;104661;104662;104663;104664;104665;104666;104667;104668;104669 83754;83755;83756;83757;83758;83759;83760;83761;83762 83756 9 EKPEEAGHEAEER Unmodified 1509.6696 0.66956432 4641 Q9NU22 MDN1 Midasin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 6.63 6.676 3 0.00055694 4616 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 69.716 59.664 17495000 0 0 0 0 3939300 4291000 0 3584100 0 5680200 0 0 0 0 0 12325 4641 11247 104670;104671;104672;104673;104674 83763;83764;83765 83764 3 EKPEEEVK Unmodified 986.49204 0.49204087 2982 Q6UX04 CWC27 Peptidyl-prolyl cis-trans isomerase CWC27 homolog yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 7.7048 4.404 2 0.031694 6560 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.98 88.627 141960000 0 141960000 0 0 0 0 0 0 0 0 0 0 0 0 0 12326 2982 11248 104675;104676 83766 83766 0 EKPELSEPSHLNGPSSDPEAAFLSR Unmodified 2693.2933 0.29328807 4393 Q9H4A3 WNK1 Serine/threonine-protein kinase WNK1 yes yes 0 0 1 By MS/MS 10 0 1 1 72.001 72.404 4 1.6981E-05 82807 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.746 36.169 17714000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17714000 12327 4393 11249 104677 83767 83767 1 EKPEVTDRAGGNK Unmodified 1399.7056 0.7055559 621 O95104 SCAF4 Splicing factor, arginine/serine-rich 15 yes yes 0 0 2 By MS/MS 2 0 1 1 7.3796 5.1524 3 0.0051315 7056 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 89.189 76.052 41173000 0 0 41173000 0 0 0 0 0 0 0 0 0 0 0 0 12328 621 11250 104678 83768 83768 1 EKPLEEPDAQGR Unmodified 1367.6681 0.66810776 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.087 20.288 3 6.2622E-05 20911 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 72.29 62.239 260330000 0 0 0 17605000 17539000 14979000 21720000 20839000 14955000 27725000 26219000 32413000 23235000 19578000 23525000 12329 4139 11251 104679;104680;104681;104682;104683;104684;104685;104686;104687;104688;104689;104690 83769;83770;83771;83772;83773;83774;83775;83776;83777;83778;83779;83780;83781;83782 83781 10 EKPPCNAQELEECDIFFEESSSLCRFDGNTLK Unmodified 3848.6968 0.69678999 3975 Q96RS6 NUDCD1 NudC domain-containing protein 1 yes yes 0 0 2 By MS/MS 2 0 1 1 92.691 84.56 4 2.3237E-10 109575 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.9 50.336 30546000 30546000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12330 3975 11252 104691 83783 83783 1 EKPQANVPSALPSLPAGSGLK Unmodified 2060.1266 0.12660408 4871 Q9UEE9 CFDP1 Craniofacial development protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.836 74.898 3 0.0008401 85955 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.67 28.296 209350000 0 0 0 8908800 15359000 6654700 15378000 15748000 10667000 13750000 26337000 21352000 15421000 18100000 41676000 12331 4871 11253 104692;104693;104694;104695;104696;104697;104698;104699;104700;104701;104702;104703 83784;83785;83786 83785 2 EKPQISAAQSTQPQK Unmodified 1639.8529 0.85294842 2779 Q5T6F2 UBAP2 Ubiquitin-associated protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 20.345 20.523 3 9.8144E-28 20749 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 109.07 96.789 188200000 0 0 0 14226000 21810000 0 26705000 14121000 16265000 28555000 0 23387000 22638000 0 20490000 12332 2779 11254 104704;104705;104706;104707;104708;104709;104710;104711;104712;104713;104714 83787;83788;83789;83790;83791;83792;83793;83794;83795;83796;83797 83791 11 EKPSYDTETDPSEGLMNVLK Oxidation (M) 2268.0468 0.046758361 4497 Q9HB71 CACYBP Calcyclin-binding protein yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.75 3.85 4 1 7 2 2 1 1 1 1 1 1 1 1 72.361 70.956 3 1.5323E-47 89108 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.54 127.27 1028900000 115770000 604460000 134620 0 0 89127000 0 22722000 23411000 61421000 48291000 63589000 0 0 0 12333 4497 11255 104715;104716;104717;104718;104719;104720;104721;104722;104723;104724;104725;104726 83798;83799;83800;83801;83802;83803;83804;83805;83806;83807 83800 5932 10 EKPSYDTETDPSEGLMNVLK Unmodified 2252.0518 0.051843739 4497 Q9HB71 CACYBP Calcyclin-binding protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.39 3.7 5 1 12 1 3 2 1 1 1 1 1 1 1 1 1 1 1 1 80.403 79.006 2;3 2.7878E-19 91420 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 94.856 86.064 2127100000 329690000 1370300000 56228000 2815800 5462800 34318000 6679400 17111000 7843300 39082000 27678000 36456000 10999000 25084000 157320000 12334 4497 11255 104727;104728;104729;104730;104731;104732;104733;104734;104735;104736;104737;104738;104739;104740;104741;104742;104743;104744 83808;83809;83810;83811;83812;83813;83814;83815;83816;83817;83818;83819;83820;83821;83822;83823;83824 83808 15 EKPTDMQNFGLR Oxidation (M) 1450.6875 0.68746299 3475 Q8TAQ2 SMARCC2 SWI/SNF complex subunit SMARCC2 yes yes 0 1 1 By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 36.431 36.671 2 0.035057 40126 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 53.683 28.828 51729000 0 0 0 0 2566500 4395600 3428900 2922200 2959800 3997400 3712100 8732200 4665000 5911700 8437700 12335 3475 11256 104745;104746;104747;104748;104749;104750;104751;104752;104753;104754;104755 83825;83826 83826 1 EKPTDMQNFGLR Unmodified 1434.6925 0.69254837 3475 Q8TAQ2 SMARCC2 SWI/SNF complex subunit SMARCC2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 2 1 1 51.607 51.767 3 1.6192E-05 57266 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 92.112 79.966 296140000 0 0 0 8792800 12731000 26460000 12595000 12479000 18037000 24688000 32339000 39768000 28799000 31641000 47808000 12336 3475 11256 104756;104757;104758;104759;104760;104761;104762;104763;104764;104765;104766;104767;104768 83827;83828;83829;83830;83831;83832;83833;83834;83835;83836;83837;83838 83832 12 EKPTTALLDK Unmodified 1114.6234 0.6233894 2207 Q12906 ILF3 Interleukin enhancer-binding factor 3 yes yes 0 0 1 By MS/MS 3 0 1 1 37.563 32.963 2 0.022595 41215 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 93.111 49.303 45904000 0 45904000 0 0 0 0 0 0 0 0 0 0 0 0 0 12337 2207 11257 104769 83839;83840 83840 2 EKPVCGTTYK Unmodified 1181.5751 0.575059 2407 Q14444 CAPRIN1 Caprin-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 11.658 11.202 3 0.0031976 9397 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.699 51.681 493390000 0 178610000 0 33466000 19626000 0 33828000 19405000 20268000 35094000 0 47473000 32497000 27796000 45323000 12338 2407 11258 104770;104771;104772;104773;104774;104775;104776;104777;104778;104779;104780;104781;104782 83841;83842;83843;83844;83845;83846;83847;83848;83849 83844 4 EKPVDLQNFGLR Unmodified 1414.7569 0.75686319 3687 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 2 1 1 1 1 1 1 1 1 69.168 69.251 3 0.00080118 79412 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 50.116 38.195 157980000 0 0 0 5974200 5415100 13226000 8943000 14171000 8322500 13418000 13448000 19831000 13232000 15591000 26406000 12339 3687 11259 104783;104784;104785;104786;104787;104788;104789;104790;104791;104792;104793;104794;104795 83850;83851;83852;83853;83854;83855;83856;83857;83858;83859;83860;83861;83862;83863;83864 83858 15 EKYDTDFYILDK Unmodified 1548.7348 0.73479034 1009 P14868 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 78.675 72.901 3 0.0086865 94191 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.28 37.236 31887000 26860000 5026900 0 0 0 0 0 0 0 0 0 0 0 0 0 12340 1009 11260 104796;104797 83865;83866 83866 2 EKYEITEQRK Unmodified 1322.683 0.68302954 2083 Q02878 RPL6 60S ribosomal protein L6 yes yes 0 0 2 By MS/MS 10 0 1 1 14.202 14.419 3 0.038056 13976 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 69.346 38.617 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12341 2083 11261 104798 83867 83867 1 ELAACQLR Unmodified 959.48585 0.48585006 1328 P33176 KIF5B Kinesin-1 heavy chain yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 32.761 32.892 2 0.0048543 35357 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 114.02 44.591 331340000 0 0 0 45003000 22963000 37721000 0 26523000 23330000 42904000 0 69145000 0 0 63754000 12342 1328 11262 104799;104800;104801;104802;104803;104804;104805;104806;104807;104808 83868;83869;83870;83871;83872;83873;83874;83875;83876 83874 9 ELAACQLRISQHEAK Unmodified 1752.8941 0.89410173 1328 P33176 KIF5B Kinesin-1 heavy chain yes yes 0 0 1 By MS/MS 2 0 1 1 50.573 42.672 3 0.00015649 59115 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.247 81.483 50785000 50785000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12343 1328 11263 104809 83877 83877 0 ELAAEDEQVFLMK Oxidation (M) 1537.7334 0.73341013 306 O43237 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 71.25 69.703 2 6.8908E-06 87389 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.38 74.783 218040000 6626100 154930000 2014000 4160500 4346900 6436000 6260900 4684200 6922900 6063800 0 9348900 6239800 0 0 12344 306 11264 104810;104811;104812;104813;104814;104815;104816;104817;104818;104819;104820;104821;104822;104823;104824 83878;83879;83880;83881;83882;83883;83884;83885;83886;83887;83888;83889;83890;83891;83892;83893 83881 396 16 ELAAEDEQVFLMK Unmodified 1521.7385 0.73849551 306 O43237 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.36 3.15 2 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 79.223 78.065 2 7.0057E-25 96647 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 153.97 126.23 161880000 7988600 103180000 0 0 2931100 5130200 2912900 4336900 3139500 5795300 5681200 6461100 0 3339500 10986000 12345 306 11264 104825;104826;104827;104828;104829;104830;104831;104832;104833;104834;104835;104836;104837;104838 83894;83895;83896;83897;83898;83899;83900;83901;83902;83903;83904;83905;83906 83897 13 ELAAGAFGTK Unmodified 963.50255 0.50254598 2411 Q14527 HLTF Helicase-like transcription factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 1 1 2 2 2 2 2 41.379 41.56 2 0.0015513 45880 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 93.178 48.457 841340000 0 0 0 46028000 47112000 80207000 56801000 54360000 37438000 76086000 91565000 109200000 78318000 59448000 104770000 12346 2411 11265 104839;104840;104841;104842;104843;104844;104845;104846;104847;104848;104849;104850;104851;104852;104853;104854;104855;104856;104857;104858;104859;104860 83907;83908;83909;83910 83910 1 ELAAGTESQALVSATPR Unmodified 1699.8741 0.87407779 3884 Q96IY1 NSL1 Kinetochore-associated protein NSL1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 61.263 61.434 2 2.5396E-18 69476 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 127.02 98.813 32510000 0 0 0 0 2672700 4239800 3765000 0 0 3983100 4686100 4907100 0 2893500 5362700 12347 3884 11266 104861;104862;104863;104864;104865;104866;104867;104868;104869;104870 83911;83912;83913;83914;83915;83916;83917;83918;83919 83914 8 ELAAIAFVK Unmodified 960.56442 0.56441796 2836;3163 Q5W0V3;Q86V87 FAM160B1;FAM160B2 Protein FAM160B1;Protein FAM160B2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.47 3.07 2 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78.02 77.136 2 0.0093345 89189 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 67.032 38.778 60186000 3062700 4871700 6393300 693520 3301600 5003700 3359500 3776000 2631000 5258100 4285800 3847300 4707900 3360700 5633600 12348 2836;3163 11267 104871;104872;104873;104874;104875;104876;104877;104878;104879;104880;104881;104882;104883;104884;104885 83920;83921;83922;83923;83924;83925;83926;83927;83928;83929;83930;83931;83932 83920 13 ELAAQLNEEAK Unmodified 1214.6143 0.61428128 5231 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 39.744 38.772 2 2.0908E-21 43368 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 170.5 135.21 774270000 10241000 436300000 0 17807000 16268000 24155000 21197000 17109000 17201000 30819000 40353000 34975000 29827000 27637000 50375000 12349 5231 11268 104886;104887;104888;104889;104890;104891;104892;104893;104894;104895;104896;104897;104898;104899;104900 83933;83934;83935;83936;83937;83938;83939;83940;83941;83942;83943;83944;83945;83946;83947;83948;83949 83939 15 ELADESQTLK Unmodified 1132.5612 0.56118307 5046 Q9UNZ2 NSFL1C NSFL1 cofactor p47 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 30.409 29.232 2 0.00046371 31731 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 135.79 37.492 255720000 16491000 133000000 1408100 6901600 0 6610300 4616400 4591600 2330000 6263700 16386000 0 4838200 13897000 38386000 12350 5046 11269 104901;104902;104903;104904;104905;104906;104907;104908;104909;104910;104911;104912;104913;104914;104915 83950;83951;83952;83953;83954;83955;83956;83957;83958;83959;83960;83961;83962;83963;83964;83965;83966 83961 16 ELADITLDPPPNCSAGPK Unmodified 1893.9142 0.91422805 1677 P51965 UBE2E1 Ubiquitin-conjugating enzyme E2 E1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 75.036 73.072 2 7.3039E-15 84173 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 111.91 97.346 236210000 0 186250000 0 0 0 0 0 0 0 25628000 0 0 0 0 24330000 12351 1677 11270 104916;104917;104918;104919;104920;104921;104922;104923;104924 83967;83968;83969;83970;83971;83972;83973;83974;83975 83971 9 ELADLPQNK Unmodified 1026.5346 0.53457439 4733 Q9NXV6 CDKN2AIP CDKN2A-interacting protein yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 38.69 33.89 2 0.005228 44144 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.81 67.684 114530000 0 114530000 0 0 0 0 0 0 0 0 0 0 0 0 0 12352 4733 11271 104925;104926 83976;83977 83976 2 ELADVLMDPPMDDQPGEK Unmodified 1998.8914 0.89144369 5171 Q9Y3P9 RABGAP1 Rab GTPase-activating protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 86.042 81.268 2 0.0036612 100969 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 48.524 25.606 19408000 0 19408000 0 0 0 0 0 0 0 0 0 0 0 0 0 12353 5171 11272 104927 83978 83978 1 ELADVLMDPPMDDQPGEK Oxidation (M) 2014.8864 0.88635831 5171 Q9Y3P9 RABGAP1 Rab GTPase-activating protein 1 yes yes 0 1 0 By MS/MS 3 0 1 1 79.016 75.645 2 0.0055578 90775 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 44.299 37.613 1909600 0 1909600 0 0 0 0 0 0 0 0 0 0 0 0 0 12354 5171 11272 104928 83979 83979 6545;6546 1 ELAEAVAGGR Unmodified 971.50361 0.50360861 4857 Q9UBT2 UBA2 SUMO-activating enzyme subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 29.139 29.387 2 0.0082748 32169 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 60.436 19.407 118510000 0 0 0 0 3059400 6359100 6566000 5312100 0 0 18783000 19697000 0 12880000 45854000 12355 4857 11273 104929;104930;104931;104932;104933;104934;104935;104936;104937 83980;83981;83982;83983 83983 2 ELAEDGYSGVEVR Unmodified 1422.6627 0.66268803 1156 P23396 RPS3 40S ribosomal protein S3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 50.67 50.823 2 2.0633E-11 58025 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 143.96 136.04 1381900000 0 0 0 72994000 87026000 73100000 66779000 67712000 59601000 140200000 143190000 115450000 152870000 205010000 197980000 12356 1156 11274 104938;104939;104940;104941;104942;104943;104944;104945;104946;104947;104948;104949 83984;83985;83986;83987;83988;83989;83990;83991;83992;83993;83994;83995;83996;83997;83998;83999;84000;84001;84002;84003;84004;84005 84005 22 ELAEDIMSVEEK Unmodified 1391.649 0.6490118 2873 Q6DKK2 TTC19 Tetratricopeptide repeat protein 19, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 77.54 71.004 2 2.3117E-10 88905 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 148.91 105.15 77079000 52470000 24609000 0 0 0 0 0 0 0 0 0 0 0 0 0 12357 2873 11275 104950;104951 84006;84007 84007 2 ELAEEEPHLVEQFQK Unmodified 1824.8894 0.8893935 1421 P40855 PEX19 Peroxisomal biogenesis factor 19 yes yes 0 0 0 By MS/MS By MS/MS 2.67 0.471 1 2 1 2 73.411 67.684 2;3 0.0081226 88582 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 35.816 21.025 67482000 28973000 38509000 0 0 0 0 0 0 0 0 0 0 0 0 0 12358 1421 11276 104952;104953;104954 84008;84009;84010 84010 3 ELAEFEK Unmodified 864.4229 0.42289868 3831 Q96F10 SAT2 Diamine acetyltransferase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 34.937 35.119 2 0.023356 39180 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 89.55 8.2531 1015200000 0 0 0 95254000 0 171780000 0 0 0 192670000 250960000 304580000 0 0 0 12359 3831 11277 104955;104956;104957;104958;104959 84011;84012;84013;84014 84014 4 ELAEITLDPPPNCSAGPK Unmodified 1907.9299 0.92987811 3921 Q96LR5;Q969T4 UBE2E2;UBE2E3 Ubiquitin-conjugating enzyme E2 E2;Ubiquitin-conjugating enzyme E2 E3 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 1 4 1 1 1 1 1 1 1 1 1 1 1 1 74.763 73.36 2;3 1.8015E-37 84963 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 128.28 68.857 486080000 6619300 341610000 0 6137900 8752900 17727000 10413000 6879000 5590200 15427000 16318000 9262500 13805000 11360000 16178000 12360 3921 11278 104960;104961;104962;104963;104964;104965;104966;104967;104968;104969;104970;104971;104972;104973;104974;104975;104976 84015;84016;84017;84018;84019;84020;84021;84022;84023;84024;84025;84026;84027;84028;84029;84030;84031 84017 17 ELAELVK Unmodified 800.46437 0.46436956 4485 Q9HAF1 MEAF6 Chromatin modification-related protein MEAF6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 44.059 44.292 2 0.024482 49091 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 97.075 0 60704000 0 0 0 0 9469100 0 0 0 0 0 20848000 30387000 0 0 0 12361 4485 11279 104977;104978;104979 84032;84033 84033 2 ELAEQGEPDSSTLSLAEK Unmodified 1902.9058 0.90583143 659 O95425 SVIL Supervillin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 61.116 61.25 2 0.0026743 69889 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 47.915 36.382 19237000 0 0 0 0 3034200 2782900 3557400 0 0 0 0 4981000 0 0 4881000 12362 659 11280 104980;104981;104982;104983;104984 84034;84035;84036 84036 2 ELAEQLGLSTGEK Unmodified 1373.7038 0.70382456 546 O75821 EIF3G Eukaryotic translation initiation factor 3 subunit G yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 61.993 60.425 2 5.5667E-33 79084 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 185.77 145.7 1285600000 35437000 1025400000 8649000 0 0 15801000 0 16094000 9261400 21461000 27976000 32645000 22305000 27304000 43244000 12363 546 11281 104985;104986;104987;104988;104989;104990;104991;104992;104993;104994;104995;104996;104997 84037;84038;84039;84040;84041;84042;84043;84044;84045;84046;84047;84048;84049;84050 84044 13 ELAEQTLNNIK Unmodified 1271.6721 0.67213051 3608 Q92499 DDX1 ATP-dependent RNA helicase DDX1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 52.671 52.766 2 0.00023031 60822 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 124.23 45.896 94459000 0 0 0 4494000 5866900 7862500 6122000 5217600 3964400 10458000 8554800 0 6907600 8176000 26836000 12364 3608 11282 104998;104999;105000;105001;105002;105003;105004;105005;105006;105007;105008 84051;84052;84053;84054;84055;84056;84057;84058;84059;84060 84060 10 ELAESDFASTFR Unmodified 1371.6307 0.63065962 4863 Q9UBW8 COPS7A COP9 signalosome complex subunit 7a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 72.351 72.394 2 0.0014891 82585 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.438 65.126 48925000 0 0 0 0 0 23402000 0 0 0 25522000 0 0 0 0 0 12365 4863 11283 105009;105010;105011;105012 84061;84062;84063;84064 84063 2 ELAETIAADDGTDPR Unmodified 1572.7267 0.72674485 465 O75153 CLUH Clustered mitochondria protein homolog yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 49.654 49.981 2 0.00060706 55418 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.82 63.188 36489000 0 0 0 0 0 6339600 0 0 0 0 0 0 6803400 8315600 15031000 12366 465 11284 105013;105014;105015;105016;105017 84065;84066;84067;84068;84069 84065 5 ELAETLQQK Unmodified 1058.5608 0.56078914 2878 Q6GMV3 PTRHD1 Putative peptidyl-tRNA hydrolase PTRHD1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.17 3.85 2 1 3 1 2 1 1 1 32.905 30.597 2 0.00095082 38783 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.68 41.928 504190000 11841000 457700000 0 0 0 0 0 0 0 0 7833000 8187400 0 0 18625000 12367 2878 11285 105018;105019;105020;105021;105022;105023 84070;84071;84072;84073;84074 84070 4 ELAETYESK Unmodified 1068.4975 0.49752018 4433 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.032 23.238 2 0.0033124 23859 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 93.429 62.816 52989000 0 0 0 2353100 2486800 4462900 4112000 2468700 2289000 4423800 5604700 8285600 5271300 5061300 6170100 12368 4433 11286 105024;105025;105026;105027;105028;105029;105030;105031;105032;105033;105034;105035 84075;84076;84077;84078;84079;84080;84081;84082;84083 84078 9 ELAFFANALEEVSIETIEAGFMTK Oxidation (M) 2675.304 0.30403568 552 O75874 IDH1 Isocitrate dehydrogenase [NADP] cytoplasmic yes yes 0 1 0 By MS/MS 2 0 1 1 105.41 100.66 3 6.233E-117 124303 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 170.92 164.41 24804000 0 24804000 0 0 0 0 0 0 0 0 0 0 0 0 0 12369 552 11287 105036 84084 84084 711 1 ELAFFANALEEVSIETIEAGFMTK Unmodified 2659.3091 0.30912106 552 O75874 IDH1 Isocitrate dehydrogenase [NADP] cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 105.15 100.64 3 3.9084E-15 125036 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.136 76.324 41901000 30209000 9944100 1747400 0 0 0 0 0 0 0 0 0 0 0 0 12370 552 11287 105037;105038;105039;105040;105041 84085;84086;84087 84086 3 ELAFQISK Unmodified 934.51238 0.51238239 2347;118 O00148;Q13838 DDX39A;DDX39B ATP-dependent RNA helicase DDX39A;Spliceosome RNA helicase DDX39B no no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.92 60.028 2 0.0051643 67365 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.9 72.79 449520000 0 0 0 16526000 20935000 59114000 32302000 26055000 13962000 50570000 42494000 37000000 30052000 43641000 76869000 12371 118;2347 11288 105042;105043;105044;105045;105046;105047;105048;105049;105050;105051;105052;105053 84088;84089;84090;84091;84092;84093;84094;84095;84096;84097;84098 84090 10 ELAGALAYIMDNK Oxidation (M) 1423.7017 0.70171607 2411 Q14527 HLTF Helicase-like transcription factor yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 2 2 2 1 78.457 78.507 2 7.0316E-17 90437 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 135.8 104.3 498650000 0 0 0 24476000 35335000 42111000 40327000 40511000 34627000 71095000 59281000 51919000 36997000 37610000 24358000 12372 2411 11289 105054;105055;105056;105057;105058;105059;105060;105061;105062;105063;105064;105065;105066;105067;105068;105069;105070;105071;105072;105073;105074;105075;105076 84099;84100;84101;84102;84103;84104;84105;84106;84107;84108;84109;84110;84111;84112;84113;84114;84115;84116;84117;84118 84106 3959 11 ELAGALAYIMDNK Unmodified 1407.7068 0.70680145 2411 Q14527 HLTF Helicase-like transcription factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 88.548 88.651 2 0.00053292 102604 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.616 74.287 43400000 0 0 0 0 2111600 2600100 0 3653700 3240900 5695100 5047900 3867000 0 2660700 14523000 12373 2411 11289 105077;105078;105079;105080;105081;105082;105083;105084;105085 84119;84120;84121;84122;84123;84124 84119 6 ELAGGLEDGEPQQK Unmodified 1469.6998 0.69980182 4086 Q9BQ52 ELAC2 Zinc phosphodiesterase ELAC protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 38.298 38.559 2 0.00016762 42618 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 104.82 87.388 69374000 0 0 0 5952100 0 0 3583100 4273700 3957100 6529800 6917000 9768900 5243000 7550200 15599000 12374 4086 11290 105086;105087;105088;105089;105090;105091;105092;105093;105094;105095 84125;84126;84127;84128;84129;84130;84131;84132 84127 8 ELAGRSAGGSSPEGGEDSDR Unmodified 1932.8409 0.84093976 4428 Q9H6Z4 RANBP3 Ran-binding protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.199 46.366 3 0.023136 51968 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 22.221 11.434 845900000 0 0 0 45185000 32730000 82298000 39711000 31191000 75927000 142740000 66016000 145750000 68694000 46136000 69510000 12375 4428 11291 105096;105097;105098;105099;105100;105101;105102;105103;105104;105105;105106;105107 84133;84134 84134 1 ELAILLGMLDPAEK Oxidation (M) 1527.8218 0.82183121 1261 P30041 PRDX6 Peroxiredoxin-6 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 2 1 2 90.657 90.8 2 2.2995E-19 105202 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 134.75 118.61 49264000 0 0 0 0 0 0 0 644430 0 2998000 4804800 6873500 0 2824500 31119000 12376 1261 11292 105108;105109;105110;105111;105112;105113;105114;105115 84135;84136;84137;84138;84139;84140;84141;84142;84143;84144 84137 1860 9 ELAILLGMLDPAEK Unmodified 1511.8269 0.82691659 1261 P30041 PRDX6 Peroxiredoxin-6 yes yes 0 0 0 By MS/MS 10 0 1 1 97.482 97.645 2 7.0397E-08 113355 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.616 66.535 2374100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2374100 12377 1261 11292 105116 84145 84145 1 ELAIQIER Unmodified 970.54475 0.54474515 2769 Q5T1V6 DDX59 Probable ATP-dependent RNA helicase DDX59 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 6 1 1 1 1 1 1 58.016 58.234 2 0.030437 66102 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 55.531 6.9693 27797000 0 0 0 0 0 7070700 0 0 4017000 6015100 0 2545500 2079400 6069000 0 12378 2769 11293 105117;105118;105119;105120;105121;105122 84146;84147 84147 2 ELALEEERLIQELEDVEK Unmodified 2184.1162 0.11615855 2408 Q14457 BECN1 Beclin-1 yes yes 0 0 1 By MS/MS 2 0 1 1 97.784 89.653 3 3.0858E-36 115724 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.03 75.157 38914000 38914000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12379 2408 11294 105123 84148 84148 1 ELALGQDR Unmodified 900.46649 0.46649483 1264 P30046;A6NHG4 DDT;DDTL D-dopachrome decarboxylase;D-dopachrome decarboxylase-like protein yes no 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 29.339 29.911 2 0.046864 31093 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.036 14.52 188420000 0 0 0 0 0 0 0 0 0 0 0 39913000 0 32823000 115680000 12380 1264 11295 105124;105125;105126 84149 84149 1 ELALGSNK Unmodified 830.44978 0.44978213 979 P13489 RNH1 Ribonuclease inhibitor yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 23.151 23.473 2 0.025937 24983 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 58.286 17.434 32400000 0 0 0 0 0 9671500 0 0 0 0 0 0 0 0 22728000 12381 979 11296 105127;105128 84150 84150 1 ELALNTAQFAK Unmodified 1204.6452 0.64518747 2323 Q13596 SNX1 Sorting nexin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 69.537 66.344 2 1.2582E-12 85097 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 157.91 116.46 409670000 13798000 354380000 5541700 11726000 0 0 0 14502000 9716700 0 0 0 0 0 0 12382 2323 11297 105129;105130;105131;105132;105133;105134;105135;105136;105137;105138;105139;105140;105141 84151;84152;84153;84154;84155;84156;84157;84158;84159;84160;84161;84162;84163;84164;84165;84166 84153 16 ELALPGELTQSR Unmodified 1312.6987 0.69867961 498 O75436 VPS26A Vacuolar protein sorting-associated protein 26A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 73.328 72.787 2 2.4602E-05 83774 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 101.38 65.87 491560000 0 226110000 0 17122000 12851000 14301000 12467000 14605000 9732900 15746000 31669000 36012000 13968000 25517000 61460000 12383 498 11298 105142;105143;105144;105145;105146;105147;105148;105149;105150;105151;105152;105153;105154;105155 84167;84168;84169;84170;84171;84172;84173;84174 84172 5 ELALPGELTQSRSYDFEFMQVEK Unmodified 2716.3054 0.30543266 498 O75436 VPS26A Vacuolar protein sorting-associated protein 26A yes yes 0 0 1 By MS/MS 2 0 1 1 95.369 87.238 3 0.002614 112756 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 38.175 23.767 17171000 17171000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12384 498 11299 105156 84175 84175 1 ELALQITK Unmodified 914.54368 0.54368251 3041 Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 16 2 2 1 2 1 1 2 1 1 1 1 1 56.612 56.647 2 0.006821 64892 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 95.352 13.568 657150000 0 0 0 35312000 40642000 45604000 51352000 46385000 31462000 69993000 60248000 79428000 59556000 49953000 87211000 12385 3041 11300 105157;105158;105159;105160;105161;105162;105163;105164;105165;105166;105167;105168;105169;105170;105171;105172 84176;84177;84178;84179;84180;84181;84182;84183;84184 84177 5 ELALQPK Unmodified 797.4647 0.46470391 1440 P41250 GARS Glycine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 37.446 32.581 2 0.0319 40756 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 87.582 19.549 2737500000 50665000 2661100000 25753000 0 0 0 0 0 0 0 0 0 0 0 0 12386 1440 11301 105173;105174;105175;105176 84185;84186 84186 2 ELALRNELIR Unmodified 1225.7143 0.71427009 2047 Q01082;P11277 SPTBN1;SPTB Spectrin beta chain, non-erythrocytic 1;Spectrin beta chain, erythrocytic yes no 0 0 1 By matching By MS/MS 10 0 2 1 1 61.217 61.57 3 0.0023614 69354 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.228 59.85 10831000 0 0 0 0 0 0 1296000 0 0 0 0 0 0 0 9535300 12387 2047 11302 105177;105178 84187 84187 1 ELALSALLK Unmodified 956.59063 0.59063271 4188 Q9BVI4 NOC4L Nucleolar complex protein 4 homolog yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 91.921 85.401 2 0.026851 107912 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.064 27.777 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12388 4188 11303 105179;105180 84188;84189 84188 2 ELAMPGEDLK Oxidation (M) 1117.5325 0.53252548 1572 P49411 TUFM Elongation factor Tu, mitochondrial yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6 4 3 3 1 1 1 1 1 1 38.708 36.201 2 0.004218 48513 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.639 61.745 195860000 7686500 163500000 1710600 0 6256500 7165000 0 0 0 0 0 9544400 0 0 0 12389 1572 11304 105181;105182;105183;105184;105185;105186 84190;84191;84192;84193 84193 2522 4 ELAMPGEDLK Unmodified 1101.5376 0.53761086 1572 P49411 TUFM Elongation factor Tu, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 2 1 1 1 1 1 60.131 57.477 2 0.0034666 73255 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.85 68.956 548630000 13122000 504600000 0 0 0 0 5251100 0 0 0 0 0 0 9775200 15881000 12390 1572 11304 105187;105188;105189;105190;105191;105192;105193;105194;105195 84194;84195;84196;84197;84198;84199;84200;84201;84202 84197 9 ELANIRSK Unmodified 929.52943 0.52942943 689;613 O94973;O95782 AP2A2;AP2A1 AP-2 complex subunit alpha-2;AP-2 complex subunit alpha-1 no no 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 19.077 15.043 2 0.017983 21742 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 134.15 25.453 195510000 132830000 62681000 0 0 0 0 0 0 0 0 0 0 0 0 0 12391 613;689 11305 105196;105197 84203 84203 0 ELANSPDCPQMCAYK Oxidation (M) 1798.7324 0.73244063 1554 P48739 PITPNB Phosphatidylinositol transfer protein beta isoform yes yes 0 1 0 By MS/MS 2 0 1 1 38.012 33.044 2 3.2938E-10 43148 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.08 106.85 18609000 0 18609000 0 0 0 0 0 0 0 0 0 0 0 0 0 12392 1554 11306 105198 84204 84204 2468 1 ELANSPDCPQMCAYK Unmodified 1782.7375 0.73752601 1554 P48739 PITPNB Phosphatidylinositol transfer protein beta isoform yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 52.228 46.893 2 1.0009E-22 60587 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 146.16 113.07 103860000 0 103860000 0 0 0 0 0 0 0 0 0 0 0 0 0 12393 1554 11306 105199;105200;105201 84205;84206 84205 2 ELAPEPWVER Unmodified 1224.6139 0.61388734 4154 Q9BTY7 HGH1 Protein HGH1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.191 67.272 2 0.003098 77087 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 77.732 49.558 85789000 0 0 0 2891900 3310500 8035200 5899300 5004200 4050600 9257100 9338800 10872000 7378900 7662000 12089000 12394 4154 11307 105202;105203;105204;105205;105206;105207;105208;105209;105210;105211;105212;105213 84207;84208;84209;84210;84211;84212;84213;84214;84215;84216;84217;84218 84208 12 ELAPHVK Unmodified 792.44939 0.4493882 3301 Q8N0X7 SPG20 Spartin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.16 15.331 2 0.03857 13960 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.432 28.512 215760000 0 0 0 8719100 8436100 9752500 13326000 16995000 10046000 16945000 25946000 24707000 30834000 26552000 23505000 12395 3301 11308 105214;105215;105216;105217;105218;105219;105220;105221;105222;105223;105224;105225 84219;84220 84219 2 ELAPLQELIEK Unmodified 1281.718 0.71801807 3060 Q9H8S9;Q7L9L4 MOB1A;MOB1B MOB kinase activator 1A;MOB kinase activator 1B yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 85.759 85.826 2 0.00031123 99378 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 101.97 87.767 196600000 0 0 0 3638300 7348600 20043000 9940800 10270000 6946100 27111000 17588000 18969000 11996000 17054000 45692000 12396 3060 11309 105226;105227;105228;105229;105230;105231;105232;105233;105234;105235;105236;105237 84221;84222;84223;84224;84225;84226;84227;84228;84229;84230;84231;84232;84233;84234;84235 84230 15 ELAPYDENWFYTR Unmodified 1702.7627 0.76273643 1401 P39019 RPS19 40S ribosomal protein S19 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 83.968 83.787 2 5.6302E-08 97011 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 101.93 68.704 9372400 0 0 0 2026900 0 7345500 0 0 0 0 0 0 0 0 0 12397 1401 11310 105238;105239 84236;84237 84236 2 ELAQEQAR Unmodified 943.47231 0.47230849 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 9.1925 9.2482 2 0.0058895 7618 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 105.12 55.077 13549000 0 0 0 4755300 0 2606000 2843700 0 0 0 0 0 2207800 1136300 0 12398 2501 11311 105240;105241;105242;105243;105244 84238;84239;84240;84241;84242 84242 5 ELAQGFLANQK Unmodified 1217.6404 0.64043645 3509 Q8TDY2 RB1CC1 RB1-inducible coiled-coil protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 62.245 56.352 2 0.00070283 72400 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.81 65.457 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12399 3509 11312 105245 84243 84243 1 ELAQIAGRPTEDEDEK Unmodified 1799.8537 0.85373628 275 O15355 PPM1G Protein phosphatase 1G yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 38.243 36.745 3 1.1775E-20 40912 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 84.859 52.607 874760000 203000000 211380000 15663000 31491000 23660000 33151000 28164000 26346000 22834000 45198000 50647000 69376000 72180000 41673000 0 12400 275 11313 105246;105247;105248;105249;105250;105251;105252;105253;105254;105255;105256;105257;105258;105259;105260;105261;105262 84244;84245;84246;84247;84248;84249;84250;84251;84252;84253;84254;84255;84256;84257;84258;84259;84260;84261;84262;84263;84264;84265 84245 22 ELAQNRLCELEK Unmodified 1501.7559 0.75587691 2816 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 0 0 1 By MS/MS 2 0 2 2 50.537 46.616 2;3 0.014568 58677 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 68.515 42.104 45929000 0 0 45929000 0 0 0 0 0 0 0 0 0 0 0 0 12401 2816 11314 105263;105264 84266;84267 84266 0 ELAQQIEEETIK Unmodified 1429.73 0.73003931 4168 Q9BUQ8 DDX23 Probable ATP-dependent RNA helicase DDX23 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.995 67.077 2 0.00088742 76728 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 92.239 63.442 148270000 0 0 0 6903100 10227000 11389000 10229000 11512000 10688000 18245000 11337000 16859000 15824000 10929000 14128000 12402 4168 11315 105265;105266;105267;105268;105269;105270;105271;105272;105273;105274;105275;105276 84268;84269;84270;84271;84272;84273;84274 84270 7 ELAQQIQK Unmodified 956.5291 0.52909508 1816;2396 P60842;Q14240 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 1 1 1 1 2 2 1 21.674 21.898 2 0.00046967 23002 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 151.17 26.286 2000400000 0 0 0 85449000 67480000 291830000 138620000 75375000 73769000 227910000 225040000 172520000 118320000 171940000 352180000 12403 1816;2396 11316 105277;105278;105279;105280;105281;105282;105283;105284;105285;105286;105287;105288;105289;105290 84275;84276;84277;84278;84279;84280;84281;84282;84283;84284;84285;84286;84287;84288;84289 84275 13 ELAQQVQQVADDYGK Unmodified 1690.8162 0.81622856 3670 Q92841 DDX17 Probable ATP-dependent RNA helicase DDX17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.122 71.196 2 4.6397E-215 81861 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 234.17 221.96 440060000 0 0 0 9691300 23673000 41485000 25454000 26917000 18196000 51346000 32456000 70799000 38178000 36042000 65825000 12404 3670 11317 105291;105292;105293;105294;105295;105296;105297;105298;105299;105300;105301;105302 84290;84291;84292;84293;84294;84295;84296;84297;84298;84299;84300;84301;84302;84303;84304;84305 84302 16 ELAQQVTPGDIVSTYGVRK Unmodified 2060.0902 0.090218576 4552 Q9NPI1 BRD7 Bromodomain-containing protein 7 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 74.697 74.793 3 0.035427 86324 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 19.58 10.534 46994000 0 0 0 0 3312600 0 0 5484300 10335000 9948300 0 0 0 5599300 12315000 12405 4552 11318 105303;105304;105305;105306;105307;105308 84306;84307 84306 1 ELAQRQEEEAAQQGPVVVSPASDYK Unmodified 2728.3304 0.33040186 491 O75391 SPAG7 Sperm-associated antigen 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 59.548 58.107 3 2.5879E-107 74094 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 150.72 135.59 174600000 13923000 70675000 6409700 0 0 5996300 7252800 6283800 3737800 6062800 9383500 12945000 6449000 8633900 16847000 12406 491 11319 105309;105310;105311;105312;105313;105314;105315;105316;105317;105318;105319;105320;105321;105322 84308;84309;84310;84311;84312;84313;84314;84315;84316;84317;84318;84319;84320;84321;84322;84323;84324;84325;84326;84327;84328 84312 21 ELAQTTR Unmodified 817.42938 0.42938104 1641 P50990 CCT8 T-complex protein 1 subunit theta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 7.5763 7.1034 2 0.023405 5032 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.872 25.312 767530000 0 664400000 10782000 0 0 20583000 11563000 13654000 9385900 0 15661000 0 0 6972100 14526000 12407 1641 11320 105323;105324;105325;105326;105327;105328;105329;105330;105331 84329;84330;84331;84332;84333 84331 5 ELAQTTRTAYGPNGMNK Unmodified 1850.8945 0.89449566 1641 P50990 CCT8 T-complex protein 1 subunit theta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 40.28 35.206 3 1.9759E-14 46121 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.133 76.49 698770000 556870000 74806000 67089000 0 0 0 0 0 0 0 0 0 0 0 0 12408 1641 11321 105332;105333;105334 84334;84335;84336;84337;84338;84339 84334 6 ELAQTTRTAYGPNGMNK Oxidation (M) 1866.8894 0.88941028 1641 P50990 CCT8 T-complex protein 1 subunit theta yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 31.151 26.556 3 9.5313E-05 33613 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 72.315 60.547 266330000 188530000 0 77797000 0 0 0 0 0 0 0 0 0 0 0 0 12409 1641 11321 105335;105336 84340;84341;84342;84343 84342 2633 4 ELARRDDIEDGDSMISSATSDTGSAK Unmodified 2726.2301 0.23009547 3143 Q86U86 PBRM1 Protein polybromo-1 yes yes 0 0 2 By MS/MS 2 0 1 1 62.717 54.449 4 4.1608E-05 73757 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.806 37.686 9396600 9396600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12410 3143 11322 105337 84344 84344 1 ELARRDDIEDGDSMISSATSDTGSAK Oxidation (M) 2742.225 0.22501009 3143 Q86U86 PBRM1 Protein polybromo-1 yes yes 0 1 2 By MS/MS 2 0 1 1 44.498 40.727 4 1.1204E-12 51370 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 75.623 62.694 8028500 0 0 8028500 0 0 0 0 0 0 0 0 0 0 0 0 12411 3143 11322 105338 84345 84345 4767 1 ELASCNPVVLEESK Unmodified 1573.7658 0.76577289 5078 Q9Y232 CDYL Chromodomain Y-like protein yes yes 0 0 0 By MS/MS 2 0 1 1 64.583 58.665 2 0.00039692 75176 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.604 71.219 22827000 0 22827000 0 0 0 0 0 0 0 0 0 0 0 0 0 12412 5078 11323 105339 84346 84346 1 ELASGEYFLK Unmodified 1155.5812 0.58119023 2324 Q13601 KRR1 KRR1 small subunit processome component homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 67.511 67.662 2 0.029134 78171 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 43.442 28.003 53063000 0 0 0 0 4595400 5028200 0 3081000 2697900 6752100 5389700 5215600 7221300 5544000 7538100 12413 2324 11324 105340;105341;105342;105343;105344;105345;105346;105347;105348;105349 84347 84347 1 ELASPVSPELR Unmodified 1196.6401 0.6401021 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 58.417 58.608 2 0.00013816 65781 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 109.44 92.899 11892000 0 0 0 0 0 0 0 0 0 0 0 0 0 11892000 0 12414 2775 11325 105350;105351;105352;105353;105354 84348;84349;84350;84351;84352 84352 5 ELASPVSPELRQK Unmodified 1452.7936 0.79364262 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 5 1 2 2 53.026 47.519 2;3 0.0093354 59241 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 52.071 42.883 114410000 12686000 54285000 47437000 0 0 0 0 0 0 0 0 0 0 0 0 12415 2775 11326 105355;105356;105357;105358;105359 84353;84354 84353 1 ELASQPDVDGFLVGGASLK Unmodified 1901.9735 0.97345748 1808 P60174 TPI1 Triosephosphate isomerase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.43 2.72 4 2 1 1 4 1 1 88.483 84.688 2;3 4.0789E-84 105615 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 169.04 157.51 186070000 7350100 168980000 4180600 0 0 0 0 0 0 0 0 0 0 0 5552300 12416 1808 11327 105360;105361;105362;105363;105364;105365;105366 84355;84356;84357;84358;84359;84360;84361;84362;84363 84355 8 ELASQPDVDGFLVGGASLKPEFVDIINAK Unmodified 3028.5757 0.57571751 1808 P60174 TPI1 Triosephosphate isomerase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.27 0.445 8 3 5 4 2 97.894 92.711 3;4 7.1927E-175 116562 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 193.14 184.96 2718300000 1505100000 1126100000 87084000 0 0 0 0 0 0 0 0 0 0 0 0 12417 1808 11328 105367;105368;105369;105370;105371;105372;105373;105374;105375;105376;105377 84364;84365;84366;84367;84368;84369;84370;84371;84372;84373;84374 84371 11 ELASQQEK Unmodified 931.46108 0.4610751 3128 Q86SQ7 SDCCAG8 Serologically defined colon cancer antigen 8 yes yes 0 0 0 By MS/MS 2 0 1 1 9.6257 6.3709 2 0.024424 8972 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.297 3.5483 76610000 0 76610000 0 0 0 0 0 0 0 0 0 0 0 0 0 12418 3128 11329 105378 84375 84375 1 ELASTERELDEAR Unmodified 1517.7322 0.73216458 3224 Q8IVB5 LIX1L LIX1-like protein yes yes 0 0 1 By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.205 37.385 3 0.0009505 41276 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 51.546 34.144 181460000 0 0 0 9661000 12145000 16184000 12902000 11543000 9351800 20649000 17781000 18462000 22734000 14100000 15952000 12419 3224 11330 105379;105380;105381;105382;105383;105384;105385;105386;105387;105388;105389;105390 84376;84377;84378;84379;84380;84381 84380 1 ELATLQR Unmodified 829.46577 0.46576654 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 27.464 27.635 2 0.0014155 28508 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 144.29 30.272 1466100000 0 0 0 157750000 122970000 223770000 152680000 0 118040000 178730000 175850000 162870000 0 0 173460000 12420 1518 11331 105391;105392;105393;105394;105395;105396;105397;105398;105399;105400 84382;84383;84384;84385;84386;84387;84388;84389;84390;84391 84388 10 ELATVLSDQPGLLGPK Unmodified 1636.9036 0.903587 5094 Q9Y2A7 NCKAP1 Nck-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 85.426 81.931 2 2.9552E-12 101856 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.63 114.78 577070000 0 572140000 4931300 0 0 0 0 0 0 0 0 0 0 0 0 12421 5094 11332 105401;105402;105403 84392;84393;84394;84395;84396 84392 4 ELAVALAQK Unmodified 941.55458 0.55458155 2285 Q13421 MSLN Mesothelin;Megakaryocyte-potentiating factor;Mesothelin, cleaved form yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 8 1 1 1 1 1 1 1 1 48.752 48.823 2 0.0098039 55809 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 65.676 30.475 60059000 0 0 0 6605400 8474000 0 0 6765000 0 0 15337000 12681000 0 10197000 0 12422 2285 11333 105404;105405;105406;105407;105408;105409;105410;105411 84397;84398;84399 84399 3 ELAVQIQK Unmodified 927.53893 0.53893149 1400 P38919 EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 2 1 1 1 2 41.706 42.026 2 0.0079858 45928 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 123.99 63.017 547930000 0 0 0 0 33876000 63675000 60397000 0 28669000 0 110290000 31804000 55877000 43795000 119540000 12423 1400 11334 105412;105413;105414;105415;105416;105417;105418;105419;105420;105421;105422 84400;84401;84402 84402 1 ELCELKPK Unmodified 1015.5372 0.53721693 4896 Q9UHD1 CHORDC1 Cysteine and histidine-rich domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 28.861 24.928 2 0.0276 31609 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 147.34 82.578 163080000 0 148420000 14663000 0 0 0 0 0 0 0 0 0 0 0 0 12424 4896 11335 105423;105424;105425 84403;84404;84405 84405 1 ELCESLEEDYK Unmodified 1413.597 0.59697623 3756 Q96BD8 SKA1 Spindle and kinetochore-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.4 3.2 1 4 1 1 1 1 1 52.853 51.879 2 9.2818E-05 65097 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.8 101.31 35024000 0 20999000 0 0 2199100 0 2236000 0 0 0 0 3739400 0 0 5850700 12425 3756 11336 105426;105427;105428;105429;105430 84406;84407 84406 2 ELCQGLGQPGSVLR Unmodified 1512.7719 0.77186132 979 P13489 RNH1 Ribonuclease inhibitor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 64.546 64.617 2 2.6891E-16 73161 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 145.91 115.3 133780000 0 0 0 9762300 3514600 15939000 5404700 5418100 5768100 12685000 18224000 27524000 0 0 29541000 12426 979 11337 105431;105432;105433;105434;105435;105436;105437;105438;105439;105440 84408;84409;84410;84411;84412;84413;84414;84415;84416 84411 8 ELCQSVMPAGVDK Unmodified 1432.669 0.66903574 3643 Q92621 NUP205 Nuclear pore complex protein Nup205 yes yes 0 0 0 By MS/MS 2 0 1 1 58.198 52.367 2 3.4357E-13 67508 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145.91 136.26 65349000 0 65349000 0 0 0 0 0 0 0 0 0 0 0 0 0 12427 3643 11338 105441 84417;84418 84418 2 ELCSLASDLSQPDLVYK Unmodified 1936.9452 0.94519382 2828 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 6.56 3.86 3 1 5 1 2 1 1 1 1 1 1 85.209 83.221 2 5.4194E-146 103157 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 227.57 206.2 746470000 6699900 702400000 5598500 0 0 0 0 0 0 6442600 4883500 6237200 0 3441200 10766000 12428 2828 11339 105442;105443;105444;105445;105446;105447;105448;105449;105450 84419;84420;84421;84422;84423;84424;84425;84426 84420 8 ELCSLNQEDFFQR Unmodified 1684.7515 0.75151981 2128 Q06546 GABPA GA-binding protein alpha chain yes yes 0 0 0 By matching By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 76.946 77.022 2 0.0010082 88518 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.653 62.763 15399000 0 0 0 0 1092600 1943800 0 0 0 0 2438700 2736500 0 0 7187600 12429 2128 11340 105451;105452;105453;105454;105455 84427 84427 1 ELDAISTNEEEK Unmodified 1376.6307 0.6307192 1582 P49642 PRIM1 DNA primase small subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 35.71 36.108 2 0.00013083 38636 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.879 62.103 29561000 0 0 0 0 0 0 4416000 2593900 0 0 0 6386600 0 5053400 11111000 12430 1582 11341 105456;105457;105458;105459;105460;105461;105462;105463 84428;84429;84430;84431;84432;84433;84434;84435;84436 84431 9 ELDAISTNEEEKEENEAESDVK Unmodified 2507.1035 0.1034812 1582 P49642 PRIM1 DNA primase small subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 54.575 54.775 3 1.735E-21 61466 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.276 83.915 59975000 0 0 0 0 6467600 0 6577900 7470100 0 9156300 0 11294000 6479200 0 12530000 12431 1582 11342 105464;105465;105466;105467;105468;105469;105470 84437;84438;84439;84440;84441;84442;84443;84444;84445;84446 84439 10 ELDALDANDELTPLGR Unmodified 1740.853 0.853008 2152 Q08211 DHX9 ATP-dependent RNA helicase A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.395 80.455 2 9.7767E-43 93100 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 206.1 180.44 211460000 0 0 0 12916000 14629000 21488000 11023000 11330000 8946300 22264000 15487000 19521000 15129000 22343000 36387000 12432 2152 11343 105471;105472;105473;105474;105475;105476;105477;105478;105479;105480;105481;105482 84447;84448;84449;84450;84451;84452;84453;84454;84455;84456;84457;84458;84459 84453 13 ELDATATVLANRQDESEQSRK Unmodified 2360.1568 0.15679459 1406;2357 P39880;Q13948 CUX1 Homeobox protein cut-like 1;Protein CASP no no 0 0 2 By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 46.193 46.461 3;4 0.0013018 52227 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 49.188 43.735 65988000 0 0 0 3356100 0 16067000 0 0 10846000 0 6915700 14710000 4803300 2937300 6352100 12433 1406;2357 11344 105483;105484;105485;105486;105487;105488;105489;105490 84460;84461;84462 84462 3 ELDDISQEIAQLQREK Unmodified 1913.9694 0.96943474 4836 Q9UBC2 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 86.72 81.597 3 3.0346E-07 103500 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 102.78 86.47 37037000 10072000 24771000 2195000 0 0 0 0 0 0 0 0 0 0 0 0 12434 4836 11345 105491;105492;105493 84463;84464;84465 84464 3 ELDDTRASREEILAQAK Unmodified 1943.9912 0.99123281 1356 P35579 MYH9 Myosin-9 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 23 2 2 2 2 2 2 2 2 2 2 1 2 46.366 46.529 3;4 2.4701E-07 52135 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 75.574 57.711 554330000 0 0 0 29443000 24321000 41272000 45929000 44178000 52886000 54196000 52182000 88500000 48334000 13647000 59444000 12435 1356 11346 105494;105495;105496;105497;105498;105499;105500;105501;105502;105503;105504;105505;105506;105507;105508;105509;105510;105511;105512;105513;105514;105515;105516 84466;84467;84468;84469;84470;84471;84472;84473 84468 5 ELDEEESIRK Unmodified 1246.6041 0.60411052 3813 Q96EK5 KIAA1279 KIF1-binding protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 23.904 22.996 3 0.0039616 23178 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.705 36.452 162000000 26149000 48018000 4795000 3914800 2986300 12495000 3235800 3210200 2326300 10933000 5215100 6228600 5244500 11516000 15730000 12436 3813 11347 105517;105518;105519;105520;105521;105522;105523;105524;105525;105526;105527;105528;105529;105530;105531;105532 84474;84475;84476;84477;84478;84479;84480;84481;84482 84476 7 ELDEEESIRKK Unmodified 1374.6991 0.69907354 3813 Q96EK5 KIAA1279 KIF1-binding protein yes yes 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 21.753 17.91 3 0.0040885 22986 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 85.813 63.235 45918000 12562000 0 33356000 0 0 0 0 0 0 0 0 0 0 0 0 12437 3813 11348 105533;105534 84483 84483 1 ELDEEHSQELK Unmodified 1355.6205 0.62048887 4365 Q9H2G2 SLK STE20-like serine/threonine-protein kinase yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.54 3.75 3 3 7 2 3 1 1 1 1 1 1 1 1 22.279 20.104 2;3 0.00033642 21500 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 78.342 51.635 344170000 12739000 240570000 1111100 0 15780000 0 18004000 0 10460000 0 0 0 22151000 23359000 0 12438 4365 11349 105535;105536;105537;105538;105539;105540;105541;105542;105543;105544;105545;105546;105547 84484;84485;84486;84487;84488;84489;84490;84491;84492;84493;84494 84484 9 ELDELMASLSDFK Unmodified 1496.7069 0.70686103 1558 P49023 PXN Paxillin yes yes 0 0 0 By MS/MS 10 0 1 1 92.748 92.886 2 0.015617 107658 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.268 43.87 1713700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1713700 12439 1558 11350 105548 84495 84495 1 ELDELMASLSDFK Oxidation (M) 1512.7018 0.70177565 1558 P49023 PXN Paxillin yes yes 0 1 0 By matching By matching By matching By matching By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 82.398 82.564 2 6.0259E-06 94794 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 94.616 71.975 31141000 0 0 0 0 0 0 2102800 0 2277200 5515300 4821900 5257200 0 0 11167000 12440 1558 11350 105549;105550;105551;105552;105553;105554;105555 84496;84497 84496 2471 2 ELDESLQVAER Unmodified 1287.6307 0.63065962 931 P10909 CLU Clusterin;Clusterin beta chain;Clusterin alpha chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 50.612 50.86 2 1.9611E-05 56430 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 150.35 58.725 251190000 0 0 0 0 17129000 0 16756000 33130000 16289000 0 46308000 34481000 29865000 24987000 32240000 12441 931 11351 105556;105557;105558;105559;105560;105561;105562;105563;105564;105565;105566;105567 84498;84499;84500;84501;84502;84503;84504;84505;84506;84507;84508;84509;84510;84511;84512;84513 84508 16 ELDEYMHGGK Unmodified 1177.5074 0.50737336 4442 Q9H814 PHAX Phosphorylated adapter RNA export protein yes yes 0 0 0 By MS/MS 10 0 1 1 30.461 30.929 2 0.022623 33383 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 60.91 35.46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12442 4442 11352 105568 84514 84514 1 ELDFLREENHK Unmodified 1428.6997 0.69974224 399 O60437 PPL Periplakin yes yes 0 0 1 By MS/MS 2 0 1 1 61.715 53.46 3 0.043434 72388 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 39.785 25.527 6581200 6581200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12443 399 11353 105569 84515 84515 1 ELDGERERR Unmodified 1158.5741 0.5741478 1957 P67936 TPM4 Tropomyosin alpha-4 chain yes yes 0 0 2 By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 5.8836 6.0152 3 0.043468 4059 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 66.692 35.095 58220000 0 0 0 0 4232600 0 6358500 5815400 0 4619600 12812000 11684000 1346800 11351000 0 12444 1957 11354 105570;105571;105572;105573;105574;105575;105576;105577 84516 84516 0 ELDGHVLK Unmodified 909.49198 0.4919813 2425;3479 Q14671;Q8TB72 PUM1;PUM2 Pumilio homolog 1;Pumilio homolog 2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 25.378 25.65 2 0.0083611 27293 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 86.472 51.58 79240000 0 0 0 0 0 12500000 0 14527000 0 18469000 0 15321000 18423000 0 0 12445 2425;3479 11355 105578;105579;105580;105581;105582;105583;105584;105585;105586 84517;84518;84519;84520;84521;84522 84520 6 ELDHNISK Unmodified 954.47706 0.47705951 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 11.582 10.994 2 0.013062 9338 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.208 14.612 39543000 9505900 0 9926900 0 0 1741900 1806900 0 1377100 2359700 0 5968300 5023100 1833500 0 12446 643 11356 105587;105588;105589;105590;105591;105592;105593;105594;105595 84523;84524;84525 84525 2 ELDILLQDTTK Unmodified 1287.6922 0.69219725 3554 Q8WUX9 CHMP7 Charged multivesicular body protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 77.737 77.211 2 0.0024902 89405 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 78.655 57.754 156980000 0 59827000 0 0 5868300 6851500 6161200 7060900 7944400 10258000 11633000 11091000 7274500 7285100 15721000 12447 3554 11357 105596;105597;105598;105599;105600;105601;105602;105603;105604;105605;105606;105607;105608 84526;84527;84528;84529;84530;84531;84532;84533;84534;84535;84536;84537;84538 84537 13 ELDIMEPK Oxidation (M) 989.47395 0.47394797 2252 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 41.953 42.121 2 0.0080578 47582 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 75.109 54.589 262520000 0 0 0 15148000 22658000 32003000 10774000 0 12591000 40432000 39869000 52914000 12151000 0 23983000 12448 2252 11358 105609;105610;105611;105612;105613;105614;105615;105616;105617;105618 84539;84540;84541;84542;84543;84544;84545;84546;84547;84548 84548 3665 9 ELDIMEPK Unmodified 973.47903 0.47903335 2252 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 54.5 54.635 2 0.025549 60966 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 58.604 58.604 357650000 0 0 0 23427000 24328000 33614000 14086000 13662000 8090100 49042000 65639000 57372000 10178000 18912000 39303000 12449 2252 11358 105619;105620;105621;105622;105623;105624;105625;105626;105627;105628;105629;105630 84549;84550 84549 2 ELDIMEPKVPDDIYK Oxidation (M) 1819.8914 0.89136734 2252 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 0 1 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 75.424 75.454 3 4.835E-06 87053 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 78.932 70.135 101320000 0 0 0 5311500 10033000 5819800 0 0 3514700 0 19879000 38421000 3648300 4990000 9699900 12450 2252 11359 105631;105632;105633;105634;105635;105636;105637;105638;105639 84551;84552;84553;84554;84555;84556 84554 3665 6 ELDLAVK Unmodified 786.44872 0.4487195 2753 Q5R3I4 TTC38 Tetratricopeptide repeat protein 38 yes yes 0 0 0 By MS/MS By MS/MS 2.67 0.471 1 2 1 2 52.436 47.073 2 0.033071 60730 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.086 10.776 141680000 233130 141440000 0 0 0 0 0 0 0 0 0 0 0 0 0 12451 2753 11360 105640;105641;105642 84557 84557 1 ELDLEAADSLK Unmodified 1202.603 0.60304789 216 O14795 UNC13B Protein unc-13 homolog B yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching 8.4 3.2 1 4 1 1 1 1 1 69.003 68.018 2 4.7941E-09 85482 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.38 47.835 61719000 0 51487000 0 0 0 0 2037800 2621700 1678700 0 0 0 3893800 0 0 12452 216 11361 105643;105644;105645;105646;105647 84558;84559 84558 2 ELDLSDANPEVTMTMLR Oxidation (M) 1949.9074 0.90742811 4825 Q9P2R3 ANKFY1 Rabankyrin-5 yes yes 0 1 0 By MS/MS 2 0 2 2 85.316 80.572 2 0.014889 100065 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 40.025 27.756 24666000 0 24666000 0 0 0 0 0 0 0 0 0 0 0 0 0 12453 4825 11362 105648;105649 84560;84561 84560 6201 2 ELDLSDANPEVTMTMLR Unmodified 1933.9125 0.91251349 4825 Q9P2R3 ANKFY1 Rabankyrin-5 yes yes 0 0 0 By MS/MS 2 0 1 1 92.89 87.98 2 4.3513E-105 109228 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 208.82 185.45 56032000 0 56032000 0 0 0 0 0 0 0 0 0 0 0 0 0 12454 4825 11362 105650 84562 84562 1 ELDLSELDDPDSAYLQEAR Unmodified 2177.9964 0.99643735 4872 Q9UER7 DAXX Death domain-associated protein 6 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 85.096 85.275 2 3.0071E-47 98746 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 128.9 113.36 5537100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5537100 12455 4872 11363 105651;105652 84563;84564 84563 2 ELDLSGQGFSEK Unmodified 1308.6198 0.61976058 3336 Q8N531 FBXL6 F-box/LRR-repeat protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 58.667 58.779 2 0.00034021 66848 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 81.771 51.604 41569000 0 0 0 2362600 2604100 0 3216300 0 0 5012300 5327900 5384400 5268000 4182500 8210400 12456 3336 11364 105653;105654;105655;105656;105657;105658;105659;105660;105661;105662;105663 84565;84566;84567;84568;84569;84570;84571;84572;84573;84574 84569 10 ELDLYDNQIK Unmodified 1249.619 0.6190323 2535 Q15435 PPP1R7 Protein phosphatase 1 regulatory subunit 7 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 61.883 62.271 2 0.0087229 70359 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.35 19.305 10364000 0 0 0 0 0 0 0 0 0 0 0 0 0 3024000 7340200 12457 2535 11365 105664;105665 84575;84576 84575 2 ELDLYLAYFVHAADSSQSESPSQPSDADIK Unmodified 3282.5204 0.52044705 2199 Q12857 NFIA Nuclear factor 1 A-type yes yes 0 0 0 By MS/MS 2 0 1 1 98.086 89.956 3 8.8622E-05 116110 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 38.349 32.106 12518000 12518000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12458 2199 11366 105666 84577 84577 1 ELDNFCNPIIYK Unmodified 1524.7283 0.72826518 686 O95757 HSPA4L Heat shock 70 kDa protein 4L yes yes 0 0 0 By matching By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 77.691 77.844 2 0.00053578 89612 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.543 66.762 23808000 0 0 0 0 0 0 0 0 0 5097000 4424700 0 1882500 2647700 9756300 12459 686 11367 105667;105668;105669;105670;105671 84578 84578 1 ELDNFCNPIIYKPK Unmodified 1749.876 0.87599205 686 O95757 HSPA4L Heat shock 70 kDa protein 4L yes yes 0 0 1 By MS/MS 2 0 1 1 79.351 74.615 3 0.0010202 92987 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.952 56.183 45862000 0 45862000 0 0 0 0 0 0 0 0 0 0 0 0 0 12460 686 11368 105672 84579 84579 1 ELDPDQPR Unmodified 968.45632 0.45632407 4982 Q9UL03 INTS6 Integrator complex subunit 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 18.737 18.968 2 0.045385 19008 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 48.561 28.006 17844000 0 0 0 0 1733500 0 1607800 0 0 2869500 2550400 0 2737900 2692400 3652200 12461 4982 11369 105673;105674;105675;105676;105677;105678;105679 84580 84580 1 ELDPGALMFISESVPK Oxidation (M) 1747.8702 0.87023797 5392 yes yes 0 1 0 By MS/MS 2 0 1 1 98.449 93.714 2 0.017688 115992 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 41.824 15.117 + 23555000 0 23555000 0 0 0 0 0 0 0 0 0 0 0 0 0 12462 5392 11370 105680 84581 84581 6766 1 ELDPTNMTYITNQAAVYFEK Oxidation (M) 2363.0991 0.099128282 1313 P31948 STIP1 Stress-induced-phosphoprotein 1 yes yes 0 1 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 87.136 81.748 2 1.1174E-85 102785 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 154.13 143.34 129770000 10403000 119370000 0 0 0 0 0 0 0 0 0 0 0 0 0 12463 1313 11371 105681;105682;105683 84582;84583;84584;84585 84582 1956 4 ELDPTNMTYITNQAAVYFEK Unmodified 2347.1042 0.10421366 1313 P31948 STIP1 Stress-induced-phosphoprotein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 6 2 2 2 95.454 90.305 2;3 1.9336E-103 113567 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 173.98 173.35 496330000 75822000 407040000 13472000 0 0 0 0 0 0 0 0 0 0 0 0 12464 1313 11371 105684;105685;105686;105687;105688;105689 84586;84587;84588;84589;84590 84588 5 ELDQGTPQYMENMEQVFEQCQQFEEK Unmodified 3264.3686 0.36857956 5030 Q9UNF0 PACSIN2 Protein kinase C and casein kinase substrate in neurons protein 2 yes yes 0 0 0 By MS/MS 3 0 1 1 93.216 89.988 3 0.010729 107804 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 24.2 21.886 4838300 0 4838300 0 0 0 0 0 0 0 0 0 0 0 0 0 12465 5030 11372 105690 84591;84592 84592 2 ELDQLDSK Unmodified 946.46074 0.46074075 602 O94913 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 24.255 24.51 2 0.019504 26413 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 63.565 14.207 45473000 0 0 0 4113500 4540800 0 0 3089200 0 4397300 5863000 4323000 6536300 6345000 6265300 12466 602 11373 105691;105692;105693;105694;105695;105696;105697;105698;105699;105700 84593;84594 84594 2 ELDQWIEQLNECK Unmodified 1703.7825 0.78248559 1954 P67775 PPP2CA Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 4.83 3.67 3 1 2 1 2 1 1 1 86.72 83.68 2 4.8079E-51 97752 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 180.07 166.67 335280000 33415000 284120000 5235100 0 0 0 0 0 0 0 2588100 0 0 0 9920400 12467 1954 11374 105701;105702;105703;105704;105705;105706 84595;84596;84597;84598;84599;84600;84601;84602 84597 8 ELDQWVEQLNECK Unmodified 1689.7668 0.76683553 1906 P62714 PPP2CB Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 5.4 3.77 2 1 2 1 2 1 1 81.577 79.677 2 3.4466E-30 98356 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 202.31 183.33 232900000 0 219880000 0 0 0 0 0 0 0 0 0 3860300 0 0 9168100 12468 1906 11375 105707;105708;105709;105710;105711 84603;84604;84605;84606;84607 84603 5 ELDSQLNEPR Unmodified 1199.5782 0.57823012 1707 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.548 34.748 2 0.00047115 38161 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 157.68 143.54 104840000 0 0 0 5675000 5767100 0 7017800 6805300 5704700 12363000 15499000 11267000 9433800 8241200 17063000 12469 1707 11376 105712;105713;105714;105715;105716;105717;105718;105719;105720;105721;105722;105723 84608;84609;84610;84611;84612;84613;84614;84615;84616;84617;84618;84619;84620 84610 11 ELDTDRPSLVR Unmodified 1299.6783 0.67827852 4596 Q9NRA8 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 40.696 40.839 3 0.00084662 45532 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 72.652 28.449 70417000 0 0 0 7125500 0 9822800 8833800 7975300 8311700 9488200 0 11460000 7400000 0 0 12470 4596 11377 105724;105725;105726;105727;105728;105729;105730;105731 84621;84622;84623;84624;84625;84626;84627 84626 6 ELDTIQECIK Unmodified 1247.6068 0.60675306 4264 Q9BZF9 UACA Uveal autoantigen with coiled-coil domains and ankyrin repeats yes yes 0 0 0 By matching By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 53.586 53.447 2 0.0033461 60542 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 76.827 55.363 13161000 0 0 0 3839500 0 0 5632100 3689600 0 0 0 0 0 0 0 12471 4264 11378 105732;105733;105734;105735 84628;84629 84628 2 ELDTLNNEIVDLQREK Unmodified 1927.9851 0.9850848 1457 P42566 EPS15 Epidermal growth factor receptor substrate 15 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 81.099 74.678 3 0.00019993 94465 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.018 58.836 57612000 11326000 46286000 0 0 0 0 0 0 0 0 0 0 0 0 0 12472 1457 11379 105736;105737 84630;84631 84630 2 ELDTVEVLK Unmodified 1044.5703 0.5702912 5103 Q9Y2I1 NISCH Nischarin yes yes 0 0 0 By MS/MS 2 0 1 1 65.159 59.241 2 0.017985 75838 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.192 24.359 28494000 0 28494000 0 0 0 0 0 0 0 0 0 0 0 0 0 12473 5103 11380 105738 84632 84632 1 ELDTVTLEDIK Unmodified 1274.6606 0.66056277 308 O43242 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 73.067 73.052 2 0.0065642 84545 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 103.88 73.314 354390000 0 0 0 26022000 32374000 57518000 11764000 0 0 61868000 75597000 73931000 15320000 0 0 12474 308 11381 105739;105740;105741;105742;105743;105744;105745;105746 84633 84633 0 ELDVDGIIAEIK Unmodified 1313.7078 0.70784731 108 CON__Q9NSB4;Q9NSB4 KRT82 Keratin, type II cuticular Hb2 yes no 0 0 0 By MS/MS 2 0 1 1 14.216 11.91 3 0.048315 15146 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 31.185 10.882 + 2050100 0 0 2050100 0 0 0 0 0 0 0 0 0 0 0 0 12475 108 11382 105747 84634 84634 1 ELDVEEAHAASTEEK Unmodified 1656.7479 0.74787422 3773 Q96C86 DCPS m7GpppX diphosphatase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.36 2.01 1 10 1 1 1 1 1 1 1 1 1 1 1 33.934 33.743 3 0.0097591 37060 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 35.182 23.017 83732000 0 4392900 0 0 3379000 4524400 5286900 3285000 0 10110000 12136000 14935000 3485300 6431700 15765000 12476 3773 11383 105748;105749;105750;105751;105752;105753;105754;105755;105756;105757;105758 84635;84636;84637 84635 2 ELEAAIQPDTSLVSVMTVNNEIGVK Unmodified 2656.3629 0.36294754 5271 Q9Y697 NFS1 Cysteine desulfurase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 94.933 92.059 3 0.00025977 110075 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 25.52 22.105 2522600 0 1894900 627720 0 0 0 0 0 0 0 0 0 0 0 0 12477 5271 11384 105759;105760 84638;84639;84640 84639 3 ELEAAQEQLAELK Unmodified 1470.7566 0.75658842 3780 Q96CN9 GCC1 GRIP and coiled-coil domain-containing protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 67.842 67.965 2 0.041834 78169 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 40.715 14.672 9949500 0 0 0 0 0 0 0 0 0 9949500 0 0 0 0 0 12478 3780 11385 105761 84641 84641 1 ELEAASAPEER Unmodified 1200.5622 0.5622457 329 O43432 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.262 26.462 2 0.00053235 27782 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 96.331 51.884 108510000 0 0 0 6059400 6369200 9752000 8644200 7240300 5460400 9127000 12469000 16639000 8030500 7850900 10865000 12479 329 11386 105762;105763;105764;105765;105766;105767;105768;105769;105770;105771;105772;105773 84642;84643;84644;84645;84646;84647 84646 6 ELEAENYHDIK Unmodified 1359.6307 0.63065962 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 2 2 1 2 2 1 1 1 1 1 2 2 34.79 34.932 2;3 0.0047237 38756 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 42.629 34.763 204130000 0 0 0 9727000 7024800 18737000 13970000 9148700 12691000 20438000 21412000 19038000 13807000 21586000 36545000 12480 2047 11387 105774;105775;105776;105777;105778;105779;105780;105781;105782;105783;105784;105785;105786;105787;105788;105789;105790;105791 84648;84649;84650;84651;84652;84653;84654;84655;84656;84657 84657 8 ELEAFREELK Unmodified 1262.6507 0.65066678 1284 P30533 LRPAP1 Alpha-2-macroglobulin receptor-associated protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.71 5 11 2 1 2 1 1 1 1 1 1 1 1 1 1 1 58.219 56.469 2;3 1.1347E-05 71294 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 150.35 74.287 120320000 25353000 23565000 32918000 2357300 0 2033800 1850300 2639000 1880400 2725300 3784800 4420800 1894100 3633800 11266000 12481 1284 11388 105792;105793;105794;105795;105796;105797;105798;105799;105800;105801;105802;105803;105804;105805;105806;105807 84658;84659;84660;84661 84660 4 ELEAIFGRPVVDGEEGEPHSISPR Unmodified 2619.2929 0.29289414 1373 P36507 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 yes yes 0 0 1 By MS/MS 10 0 1 1 76.553 76.839 4 3.3618E-09 88215 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.284 45.227 14494000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14494000 12482 1373 11389 105808 84662;84663 84662 2 ELEALDEVFTK Unmodified 1292.65 0.64999808 5020 Q9UMX5 NENF Neudesin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.23 3.79 6 2 5 5 2 1 1 1 1 1 1 84.436 80.915 2;3 4.116E-09 102227 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 132.01 118.01 542530000 77475000 425060000 11799000 0 0 0 1228600 0 0 0 4957800 4279400 0 6457600 11265000 12483 5020 11390 105809;105810;105811;105812;105813;105814;105815;105816;105817;105818;105819;105820;105821 84664;84665;84666;84667;84668;84669;84670;84671;84672;84673;84674;84675 84669 10 ELEALGK Unmodified 758.41742 0.41741937 2881 Q6I9Y2 THOC7 THO complex subunit 7 homolog yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 27.404 27.722 2 0.03046 29523 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 74.717 6.3188 69154000 0 0 0 0 0 4633100 4488500 6982400 0 7797700 8928500 10788000 9838600 6890000 8807400 12484 2881 11391 105822;105823;105824;105825;105826;105827;105828;105829;105830 84676;84677 84676 2 ELEALIQNLDNVVEDSMLVDPK Oxidation (M) 2499.2414 0.24143542 2033 Q00341 HDLBP Vigilin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 3 2 1 100.29 95.23 2;3 2.0303E-84 119274 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 148.7 138.06 120390000 76205000 39162000 5021700 0 0 0 0 0 0 0 0 0 0 0 0 12485 2033 11392 105831;105832;105833;105834;105835;105836 84678;84679;84680;84681;84682;84683;84684;84685;84686 84685 3287 9 ELEALIQNLDNVVEDSMLVDPK Unmodified 2483.2465 0.2465208 2033 Q00341 HDLBP Vigilin yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 4 2 2 4 102.4 96.954 2;3 2.0354E-74 121367 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 141.78 120.54 112790000 83059000 29736000 0 0 0 0 0 0 0 0 0 0 0 0 0 12486 2033 11392 105837;105838;105839;105840;105841;105842 84687;84688;84689;84690;84691 84689 5 ELEALMPSAAGQEK Oxidation (M) 1488.713 0.71300904 2414 Q14562 DHX8 ATP-dependent RNA helicase DHX8 yes yes 0 1 0 By MS/MS By MS/MS 6 4 1 1 1 1 48.569 45.725 2 2.4953E-18 58366 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.43 84.971 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12487 2414 11393 105843;105844 84692;84693 84693 3968 2 ELEANVLATAPDK Unmodified 1369.7089 0.70890994 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 60.95 60.334 2 1.8303E-51 69051 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 182.93 148.21 376480000 743530 13870000 0 17033000 17832000 26860000 27658000 22051000 19441000 38904000 36270000 43006000 26357000 29183000 57271000 12488 4634 11394 105845;105846;105847;105848;105849;105850;105851;105852;105853;105854;105855;105856;105857;105858;105859;105860 84694;84695;84696;84697;84698;84699;84700;84701;84702;84703;84704;84705;84706;84707;84708;84709;84710 84696 17 ELEAQEAR Unmodified 944.45632 0.45632407 3366 Q8N7H5 PAF1 RNA polymerase II-associated factor 1 homolog yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.344 12.492 2 0.0071781 11339 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 124.83 51.796 46200000 0 0 0 1918500 1985000 2504800 2559400 2687500 2349800 4514700 4163800 8329300 5752400 3192300 6242400 12489 3366 11395 105861;105862;105863;105864;105865;105866;105867;105868;105869;105870;105871;105872 84711;84712;84713 84713 1 ELEAQEARK Unmodified 1072.5513 0.55128709 3366 Q8N7H5 PAF1 RNA polymerase II-associated factor 1 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8.1947 7.6121 2 0.014882 6190 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 107.01 33.391 120600000 9859500 48899000 1867000 2133900 3335000 2423200 3409600 3573100 3847800 5692900 0 9179000 8673000 7779600 9925300 12490 3366 11396 105873;105874;105875;105876;105877;105878;105879;105880;105881;105882;105883;105884;105885;105886 84714;84715;84716 84716 2 ELEAQEK Unmodified 845.41306 0.41306227 167 O00541 PES1 Pescadillo homolog yes yes 0 0 0 By matching By MS/MS By matching By matching 10 0 4 1 1 1 1 6.8958 7.0949 2 0.031031 4784 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 74.191 26.076 11426000 0 0 0 0 0 0 0 3386700 4667100 0 0 1575900 0 0 1796500 12491 167 11397 105887;105888;105889;105890 84717 84717 1 ELEAQLDDAVAEASK Unmodified 1587.7628 0.76279601 5247 Q9Y5S2 CDC42BPB Serine/threonine-protein kinase MRCK beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.7 3.52 2 1 7 1 2 1 1 1 1 1 1 1 73.639 72.851 2 8.5329E-16 89843 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 147.24 121.31 152830000 0 105790000 0 0 0 5147300 0 0 3770500 9384500 7865800 6267100 0 4454000 10147000 12492 5247 11398 105891;105892;105893;105894;105895;105896;105897;105898;105899;105900 84718;84719;84720 84718 3 ELEASEELDTICPK Unmodified 1632.7553 0.75526779 570 O76003 GLRX3 Glutaredoxin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.52 4.04 3 4 2 12 4 4 1 1 1 1 1 1 1 1 1 1 1 1 1 74.359 73.372 2 7.7967E-67 87958 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 240.08 217.39 1751600000 83058000 1451800000 2111600 4494100 8011800 28617000 11615000 9691800 8831800 20621000 24185000 24655000 14950000 17762000 41242000 12493 570 11399 105901;105902;105903;105904;105905;105906;105907;105908;105909;105910;105911;105912;105913;105914;105915;105916;105917;105918;105919;105920;105921 84721;84722;84723;84724;84725;84726;84727;84728;84729;84730;84731;84732;84733;84734;84735;84736;84737;84738;84739;84740;84741;84742 84734 21 ELEAVCQDVLSLLDNYLIK Unmodified 2234.1504 0.15043557 1869 P61981 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 103.49 98.995 3 7.8547E-78 119598 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 165.16 156.84 60276000 18825000 38583000 2868100 0 0 0 0 0 0 0 0 0 0 0 0 12494 1869 11400 105922;105923;105924;105925;105926 84743;84744;84745;84746;84747;84748 84746 6 ELECAEDPGSAGEAAR Unmodified 1660.6999 0.69987817 611 O94966 USP19 Ubiquitin carboxyl-terminal hydrolase 19 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 32.144 32.437 2 2.2891E-05 34553 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.64 62.49 10396000 0 0 0 0 0 2508000 0 0 0 2379800 0 0 0 1595700 3912400 12495 611 11401 105927;105928;105929;105930 84749;84750;84751 84751 3 ELEDATETADAMNR Oxidation (M) 1580.6624 0.66243003 1356 P35579 MYH9 Myosin-9 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.594 28.789 2 0 30943 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 261.52 259.71 522570000 0 0 0 39812000 35899000 47535000 51599000 30661000 27487000 50849000 53623000 74566000 37549000 33789000 39203000 12496 1356 11402 105931;105932;105933;105934;105935;105936;105937;105938;105939;105940;105941;105942 84752;84753;84754;84755;84756;84757;84758;84759;84760;84761;84762;84763;84764 84755 2074 12 ELEDATETADAMNR Unmodified 1564.6675 0.66751541 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.002 43.177 2 9.3676E-156 47792 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 221.59 218.33 917920000 0 0 0 53646000 63052000 84985000 65341000 52195000 46256000 86746000 103620000 112920000 70133000 63877000 115160000 12497 1356 11402 105943;105944;105945;105946;105947;105948;105949;105950;105951;105952;105953;105954 84765;84766;84767;84768;84769;84770;84771;84772;84773;84774;84775;84776;84777 84775 13 ELEDATETADAMNREVSSLK Oxidation (M) 2224.0165 0.016520865 1356 P35579 MYH9 Myosin-9 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 2 1 1 2 1 2 2 2 2 1 2 2 49.185 49.374 3 5.9195E-54 56228 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 123.41 113.65 850880000 0 0 0 67893000 48379000 49344000 115860000 21090000 81123000 81677000 105600000 131970000 30251000 55794000 61907000 12498 1356 11403 105955;105956;105957;105958;105959;105960;105961;105962;105963;105964;105965;105966;105967;105968;105969;105970;105971;105972;105973;105974 84778;84779;84780;84781;84782;84783;84784;84785;84786;84787;84788;84789;84790;84791;84792;84793;84794;84795;84796;84797;84798;84799;84800;84801;84802 84801 2074 24 ELEDATETADAMNREVSSLK Unmodified 2208.0216 0.021606243 1356 P35579 MYH9 Myosin-9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 2 1 2 1 1 2 2 2 2 2 2 74.184 74.268 2;3 6.4983E-70 85200 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 169.92 134.28 698310000 0 0 0 9250100 37820000 41925000 23247000 51402000 49746000 83144000 72877000 90842000 44249000 51183000 142630000 12499 1356 11403 105975;105976;105977;105978;105979;105980;105981;105982;105983;105984;105985;105986;105987;105988;105989;105990;105991;105992;105993;105994 84803;84804;84805;84806;84807;84808;84809;84810;84811;84812;84813;84814;84815;84816;84817;84818;84819 84808 17 ELEDFEMK Oxidation (M) 1055.4481 0.44812715 4879 Q9UG63 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 36.939 37.109 2 0.016688 41143 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 58.782 45.007 145830000 0 0 0 9957900 9094600 13903000 12629000 9131300 14058000 15815000 13309000 17122000 16386000 0 14429000 12500 4879 11404 105995;105996;105997;105998;105999;106000;106001;106002;106003;106004;106005 84820;84821;84822;84823;84824 84820 6226 4 ELEDFEMK Unmodified 1039.4532 0.45321253 4879 Q9UG63 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 54.191 53.548 2 0.0067419 59815 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 98.299 53.879 643310000 0 141840000 0 32843000 23469000 38789000 31230000 30306000 30476000 54553000 55126000 56020000 42996000 41513000 64146000 12501 4879 11404 106006;106007;106008;106009;106010;106011;106012;106013;106014;106015;106016;106017;106018;106019 84825;84826;84827;84828;84829;84830;84831;84832;84833;84834;84835;84836;84837;84838;84839 84835 15 ELEDLEGYQNTIVAGSLITK Unmodified 2192.1212 0.12124393 494 O75400 PRPF40A Pre-mRNA-processing factor 40 homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.39 3.02 1 3 14 1 2 1 1 2 1 2 2 2 2 1 1 87.682 87.082 2;3 1.2775E-58 101003 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 167.32 150.11 67177000 838760 8328400 4342300 0 2194800 2320300 0 1290100 4388700 17837000 9768700 7407100 0 1390800 7069800 12502 494 11405 106020;106021;106022;106023;106024;106025;106026;106027;106028;106029;106030;106031;106032;106033;106034;106035;106036;106037 84840;84841;84842;84843;84844;84845;84846;84847;84848;84849;84850;84851 84842 11 ELEDLEVDGQK Unmodified 1273.6038 0.60377617 2168 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 5.2 3.92 3 2 1 2 1 1 52.7 44.685 2 3.0165E-05 58833 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 143.03 83.684 40848000 40848000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12503 2168 11406 106038;106039;106040;106041;106042 84852;84853;84854;84855;84856;84857 84854 6 ELEDLLSPLEELVK Unmodified 1625.8764 0.8763692 1387 P37198 NUP62 Nuclear pore glycoprotein p62 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 1 3 1 100.45 96.693 2 4.4088E-12 119453 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 151.98 73.217 137770000 5273300 128370000 4124700 0 0 0 0 0 0 0 0 0 0 0 0 12504 1387 11407 106043;106044;106045;106046;106047 84858;84859;84860;84861;84862 84859 4 ELEDPESAMLDTLDR Unmodified 1732.7825 0.78254517 3201 Q86XZ4 SPATS2 Spermatogenesis-associated serine-rich protein 2 yes yes 0 0 0 By MS/MS 10 0 1 1 84.165 84.344 2 7.6623E-05 97391 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.979 55.593 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12505 3201 11408 106048 84863 84863 1 ELEDPHAK Unmodified 937.45051 0.45051041 384 O60231 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 10.172 6.608 2 0.031271 9083 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.189 26.434 110840000 4888200 105950000 0 0 0 0 0 0 0 0 0 0 0 0 0 12506 384 11409 106049;106050 84864 84864 1 ELEDSPQENVSVTEIIKPCDDPK Unmodified 2641.2429 0.24289199 2723 Q5F1R6 DNAJC21 DnaJ homolog subfamily C member 21 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 4 3.46 3 1 1 1 1 1 78.359 74.569 3 7.0412E-58 93233 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 133.38 114.07 94601000 16198000 64119000 3656800 0 0 0 0 0 0 0 0 0 0 0 10628000 12507 2723 11410 106051;106052;106053;106054 84865;84866;84867;84868;84869 84865 5 ELEDTLQVR Unmodified 1101.5666 0.5666028 3509 Q8TDY2 RB1CC1 RB1-inducible coiled-coil protein 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 49.723 49.864 2 0.014048 55315 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 97.798 51.372 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12508 3509 11411 106055;106056 84870;84871 84871 2 ELEEAVTSALQQETEK Unmodified 1803.8738 0.87380302 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS 2.5 0.5 2 2 4 79.8 75.759 2;3 7.6332E-83 93995 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 251.03 176.18 136510000 0 136510000 0 0 0 0 0 0 0 0 0 0 0 0 0 12509 5049 11412 106057;106058;106059;106060 84872;84873;84874;84875 84872 4 ELEEDFIK Unmodified 1021.4968 0.4967919 2363 Q14019 COTL1 Coactosin-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 60.763 59.425 2 0.005818 67889 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 105.39 72.92 3775200000 204730000 3112600000 39914000 13155000 7992200 15802000 14051000 9565300 10934000 17456000 62705000 50968000 14538000 40537000 160210000 12510 2363 11413 106061;106062;106063;106064;106065;106066;106067;106068;106069;106070;106071;106072;106073;106074;106075;106076 84876;84877;84878;84879;84880;84881;84882;84883;84884;84885;84886;84887;84888;84889;84890;84891;84892;84893;84894 84878 19 ELEEEAEEEQRILQQSVVK Unmodified 2285.1387 0.13868491 4368 Q9H2J4 PDCL3 Phosducin-like protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 81.432 77.012 3 2.176E-65 97708 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 114.4 105.58 129400000 97471000 17265000 14663000 0 0 0 0 0 0 0 0 0 0 0 0 12511 4368 11414 106077;106078;106079;106080;106081 84895;84896;84897;84898 84897 4 ELEEEITLRK Unmodified 1258.6769 0.67688153 455 O75116 ROCK2 Rho-associated protein kinase 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 54.956 48.45 2;3 0.0025027 66174 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.883 54.349 56215000 25801000 18384000 12030000 0 0 0 0 0 0 0 0 0 0 0 0 12512 455 11415 106082;106083;106084;106085 84899;84900;84901 84900 2 ELEEELQHLK Unmodified 1266.6456 0.6455814 1996 P82094 TMF1 TATA element modulatory factor yes yes 0 0 0 By MS/MS 2 0 1 1 63.101 57.208 3 0.011308 73429 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 56.013 41.196 12942000 0 12942000 0 0 0 0 0 0 0 0 0 0 0 0 0 12513 1996 11416 106086 84902 84902 1 ELEEETGYK Unmodified 1096.4924 0.49243481 4970 Q9UKK9 NUDT5 ADP-sugar pyrophosphatase yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 23.594 23.95 2 0.0033925 24203 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 105.14 42.477 170440000 0 0 0 7673200 0 0 0 4589700 0 0 23655000 24687000 5659300 25910000 78262000 12514 4970 11417 106087;106088;106089;106090;106091;106092;106093 84903;84904;84905;84906;84907;84908;84909 84903 7 ELEEEWVK Unmodified 1060.5077 0.50769094 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 53.205 53.173 2 0.0068592 60563 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 93.561 42.929 104980000 0 0 0 60290000 0 0 9264400 10495000 0 0 0 0 24934000 0 0 12515 2361 11418 106094;106095;106096;106097 84910;84911 84910 2 ELEEIVQPIISK Unmodified 1396.7813 0.7813466 932 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.07 3.83 1 7 2 17 4 4 2 1 1 2 2 1 1 1 2 1 1 2 2 81.249 80.501 2;3 1.9226E-43 91948 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 182.64 159.9 12926000000 373700000 9315100000 114870000 121760000 204180000 203920000 186560000 174450000 161880000 271860000 328220000 327420000 235390000 308830000 597630000 12516 932 11419 106098;106099;106100;106101;106102;106103;106104;106105;106106;106107;106108;106109;106110;106111;106112;106113;106114;106115;106116;106117;106118;106119;106120;106121;106122;106123;106124 84912;84913;84914;84915;84916;84917;84918;84919;84920;84921;84922;84923;84924;84925;84926;84927;84928;84929;84930;84931;84932;84933;84934;84935;84936;84937;84938;84939;84940;84941;84942;84943 84932 29 ELEEIYMLPR Oxidation (M) 1307.6431 0.64313856 199 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 no no 0 1 0 By MS/MS 10 0 1 1 75.124 75.116 2 0.049576 86705 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 53.775 28.637 3949000 0 0 0 0 0 3949000 0 0 0 0 0 0 0 0 0 12517 199 11420 106125 84944 84944 0 ELEELLLEASQESGQETL Unmodified 2016.9739 0.97391099 551 O75864 PPP1R37 Protein phosphatase 1 regulatory subunit 37 yes yes 0 0 0 By MS/MS 2 0 1 1 96.836 92.014 2 0.00033349 114043 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.82 37.61 14260000 0 14260000 0 0 0 0 0 0 0 0 0 0 0 0 0 12518 551 11421 106126 84945 84945 1 ELEELRDK Unmodified 1030.5295 0.52948901 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 1 By MS/MS 3 0 1 1 26.463 22.247 2 0.031846 27936 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 141.39 57.774 7421300 0 7421300 0 0 0 0 0 0 0 0 0 0 0 0 0 12519 2459 11422 106127 84946 84946 0 ELEELRQTVK Unmodified 1243.6772 0.67721588 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 1 By MS/MS By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.43 2.06 1 13 1 1 1 1 1 1 1 1 1 2 1 1 1 38.208 38.154 2;3 3.1915E-05 48320 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 142 56.834 81041000 0 0 12678000 1890600 2951200 3016100 3398500 3892800 2038300 5151700 5199800 26614000 4472700 3631400 6105700 12520 2459 11423 106128;106129;106130;106131;106132;106133;106134;106135;106136;106137;106138;106139;106140;106141 84947;84948;84949;84950;84951 84949 5 ELEELSLEAQGIK Unmodified 1457.7613 0.76133944 437 O60841 EIF5B Eukaryotic translation initiation factor 5B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 75.615 74.478 2 1.3469E-124 86299 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 213.31 128.24 1035900000 30988000 734070000 6529200 11163000 14534000 23737000 16953000 18743000 20466000 30770000 25503000 30135000 17243000 17660000 37389000 12521 437 11424 106142;106143;106144;106145;106146;106147;106148;106149;106150;106151;106152;106153;106154;106155;106156;106157 84952;84953;84954;84955;84956;84957;84958;84959;84960;84961;84962;84963;84964;84965;84966;84967;84968;84969;84970 84953 19 ELEEMIENLEPHIDDPDVK Unmodified 2264.0518 0.051843739 3524 Q8TF05 PPP4R1 Serine/threonine-protein phosphatase 4 regulatory subunit 1 yes yes 0 0 0 By MS/MS 2 0 1 1 93.193 85.063 3 0.01474 110232 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 29.025 21.985 5663200 5663200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12522 3524 11425 106158 84971 84971 1 ELEENLNIAIDVIDAYQK Unmodified 2089.0579 0.057915395 4831 Q9UBB4 ATXN10 Ataxin-10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.29 0.452 5 2 2 3 2 97.573 93.365 2;3 5.3671E-107 116632 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 260.19 235.34 182720000 112020000 62308000 8394300 0 0 0 0 0 0 0 0 0 0 0 0 12523 4831 11426 106159;106160;106161;106162;106163;106164;106165 84972;84973;84974;84975;84976;84977 84974 6 ELEEQLENETLHK Unmodified 1610.7788 0.77878042 6 A0MZ66 KIAA1598 Shootin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.82 3.81 5 2 10 2 4 1 1 1 1 1 1 1 1 1 1 1 56.405 54.068 2;3 5.0065E-205 69171 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 263.11 143.84 413590000 36165000 271150000 8441300 9785000 0 6619000 11138000 8454400 6433100 7148000 12368000 14071000 6086500 0 15723000 12524 6 11427 106166;106167;106168;106169;106170;106171;106172;106173;106174;106175;106176;106177;106178;106179;106180;106181;106182 84978;84979;84980;84981;84982;84983;84984;84985;84986;84987;84988;84989;84990;84991;84992;84993;84994;84995;84996;84997;84998 84981 20 ELEEQTRK Unmodified 1031.5247 0.52473799 1345 P35241 RDX Radixin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 6.723 3.6602 2 0.013672 5735 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 172.15 98.53 730800000 123830000 561360000 45610000 0 0 0 0 0 0 0 0 0 0 0 0 12525 1345 11428 106183;106184;106185;106186 84999;85000;85001;85002 85002 3 ELEEQVR Unmodified 901.45051 0.45051041 2429 Q14678 KANK1 KN motif and ankyrin repeat domain-containing protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 18.951 18.927 2 0.0442 19333 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 102.81 8.9211 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12526 2429 11429 106187 85003 85003 1 ELEEREIDDTYIEDAADVDARK Unmodified 2594.1984 0.19838463 4010 Q99459 CDC5L Cell division cycle 5-like protein yes yes 0 0 2 By MS/MS 2 0 2 2 77.273 69.143 3;4 2.1031E-39 90999 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 124.82 117.13 121070000 121070000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12527 4010 11430 106188;106189 85004;85005 85005 2 ELEETLNKIR Unmodified 1243.6772 0.67721588 456 O75122 CLASP2 CLIP-associating protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 37.781 38.107 3 0.021105 40945 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.743 6.0498 61734000 0 0 0 0 0 0 0 8313900 6051600 8254000 10310000 0 8656600 6930500 13217000 12528 456 11431 106190;106191;106192;106193;106194;106195;106196 85006 85006 1 ELEEVMK Unmodified 876.42627 0.4262695 3583 Q8WXA9 SREK1 Splicing regulatory glutamine/lysine-rich protein 1 yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 32.895 33.004 2 0.024293 36405 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 99.384 18.829 55221000 0 0 0 0 5511900 5468400 5229600 5998400 3955400 9912400 11868000 0 7277000 0 0 12529 3583 11432 106197;106198;106199;106200;106201;106202;106203;106204 85007 85007 1 ELEEVSPETPVVPATTQR Unmodified 1981.0004 0.0004005156 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching 10 0 5 1 1 1 1 1 67.314 67.631 2 0.0051222 76632 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 36.284 24.418 14440000 0 0 0 0 0 0 0 0 0 0 0 4407500 3359600 2990200 3682700 12530 2501 11433 106205;106206;106207;106208;106209 85008;85009 85008 2 ELEEWDAQLAQK Unmodified 1458.6991 0.69907354 4905 Q9UHP3 USP25 Ubiquitin carboxyl-terminal hydrolase 25 yes yes 0 0 0 By MS/MS 2 0 1 1 71.006 65.19 2 0.013012 83152 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.538 57.758 20178000 0 20178000 0 0 0 0 0 0 0 0 0 0 0 0 0 12531 4905 11434 106210 85010 85010 0 ELEEWYAR Unmodified 1094.5033 0.50327426 885 P09496 CLTA Clathrin light chain A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 54.897 55.035 2 0.0052859 62084 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 107.43 100.2 134010000 0 0 0 5571600 6817400 0 5130500 7905600 5813700 8167400 18930000 23785000 7494300 12411000 31987000 12532 885 11435 106211;106212;106213;106214;106215;106216;106217;106218;106219;106220;106221;106222 85011;85012;85013;85014;85015;85016;85017;85018;85019;85020;85021;85022;85023 85017 13 ELEEWYARQDEQLQK Unmodified 1963.9276 0.92756992 885 P09496 CLTA Clathrin light chain A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 2 3 2 65.798 59.988 2;3 2.5179E-57 77240 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 193.73 161.13 292600000 83453000 150280000 58864000 0 0 0 0 0 0 0 0 0 0 0 0 12533 885 11436 106223;106224;106225;106226;106227;106228;106229 85024;85025;85026;85027;85028;85029;85030 85024 6 ELEEYLEK Unmodified 1051.5074 0.50735659 4818 Q9P2I0 CPSF2 Cleavage and polyadenylation specificity factor subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 51.366 49.855 2 0.0067966 56828 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 96.492 43.14 153180000 0 113810000 0 5413800 0 0 7908800 0 0 6271800 0 0 10617000 9158400 0 12534 4818 11437 106230;106231;106232;106233;106234;106235;106236;106237;106238;106239 85031;85032;85033;85034;85035;85036;85037;85038 85031 8 ELEFLGWYTTGGPPDPSDIHVHK Unmodified 2594.2442 0.24415304 3053 Q7L5N1 COPS6 COP9 signalosome complex subunit 6 yes yes 0 0 0 By MS/MS 2 0 1 1 93.668 85.538 4 0.00014358 110748 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.537 56.66 35081000 35081000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12535 3053 11438 106240 85039;85040 85040 2 ELEFYLR Unmodified 968.49673 0.49673232 1877 P62241 RPS8 40S ribosomal protein S8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.169 75.228 2 0.017142 86743 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 114.54 45.15 86730000 0 0 0 2871500 5022600 4218600 4531000 4171500 4296100 9900000 6057100 15334000 7563900 9016000 13747000 12536 1877 11439 106241;106242;106243;106244;106245;106246;106247;106248;106249;106250;106251;106252 85041;85042;85043;85044;85045;85046;85047;85048;85049;85050;85051 85042 11 ELEFYLRK Unmodified 1096.5917 0.59169534 1877 P62241 RPS8 40S ribosomal protein S8 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.47 2 1 14 1 1 1 1 1 1 2 1 1 1 2 1 1 60.362 59.922 2 0.010002 67377 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 125.25 20.805 229440000 8779300 0 0 9312100 6323900 17302000 10732000 11396000 17377000 14214000 13350000 32621000 23146000 18139000 46749000 12537 1877 11440 106253;106254;106255;106256;106257;106258;106259;106260;106261;106262;106263;106264;106265;106266;106267 85052;85053;85054;85055;85056;85057 85055 3 ELEGLINTK Unmodified 1015.555 0.55497548 1106 P20585 MSH3 DNA mismatch repair protein Msh3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 54.275 54.412 2 0.0030604 61403 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 91.853 32.872 70193000 0 0 0 8024300 3649000 6740200 5437000 3413300 4901000 6864100 5828900 7046900 5478100 4389000 8420900 12538 1106 11441 106268;106269;106270;106271;106272;106273;106274;106275;106276;106277;106278;106279 85058;85059;85060;85061;85062;85063;85064;85065;85066;85067;85068;85069 85066 12 ELEGLQQLLQNVK Unmodified 1510.8355 0.83550744 2155 Q08378 GOLGA3 Golgin subfamily A member 3 yes yes 0 0 0 By MS/MS 2 0 1 1 96.753 91.932 2 1.909E-25 113924 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 187.64 123.6 14877000 0 14877000 0 0 0 0 0 0 0 0 0 0 0 0 0 12539 2155 11442 106280 85070 85070 1 ELEGLQVK Unmodified 914.5073 0.50729701 1409 P40222 TXLNA Alpha-taxilin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44.497 43.477 2 0.0075172 49706 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 89.369 14.931 659340000 22602000 463220000 5000500 8179800 6904300 10938000 10939000 10970000 8155700 10810000 23095000 23859000 10327000 12858000 31485000 12540 1409 11443 106281;106282;106283;106284;106285;106286;106287;106288;106289;106290;106291;106292;106293;106294;106295 85071;85072;85073;85074;85075;85076;85077;85078;85079;85080;85081;85082 85081 12 ELEGPQIAVR Unmodified 1110.6033 0.60332266 4760 Q9NZ52 GGA3 ADP-ribosylation factor-binding protein GGA3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 53.603 53.388 2 0.010957 60588 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 75.738 45.126 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12541 4760 11444 106296;106297;106298;106299 85083;85084;85085;85086 85084 4 ELEHALEK Unmodified 967.49746 0.4974606 865 P08397 HMBS Porphobilinogen deaminase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.75 3.85 4 1 7 1 2 2 1 1 1 1 1 1 1 20.673 19.134 2 0.0011937 25614 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 167.24 110.06 210640000 51048000 81431000 59558000 0 472790 3401700 0 0 0 0 2415400 2716100 0 3027900 6571000 12542 865 11445 106300;106301;106302;106303;106304;106305;106306;106307;106308;106309;106310;106311 85087;85088;85089;85090;85091;85092;85093;85094;85095;85096 85089 9 ELEHLSHIK Unmodified 1104.5928 0.59275797 2881 Q6I9Y2 THOC7 THO complex subunit 7 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 28.635 25.529 2 0.007055 32388 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 102.51 6.6044 4577200 0 0 4577200 0 0 0 0 0 0 0 0 0 0 0 0 12543 2881 11446 106312 85097 85097 1 ELEHVNLSVK Unmodified 1166.6295 0.62953741 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.43 2.06 1 13 1 1 1 1 2 1 1 1 1 1 1 1 1 46.265 46.001 3 0.004701 51581 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 50.452 31.209 150470000 0 21450000 0 5894700 5679200 7180700 18384000 8713100 6093600 9370200 9736700 16390000 12894000 11621000 17065000 12544 2291 11447 106313;106314;106315;106316;106317;106318;106319;106320;106321;106322;106323;106324;106325;106326 85098;85099;85100;85101;85102 85101 5 ELEIAQDR Unmodified 972.48762 0.4876242 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 32.429 32.674 2 0.0099307 35620 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 81.296 17.731 63270000 0 0 0 0 0 0 11805000 0 10240000 0 24682000 0 16543000 0 0 12545 965 11448 106327;106328;106329;106330 85103;85104;85105;85106 85106 3 ELEIEERER Unmodified 1201.5939 0.59388018 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.696 28.89 3 0.0078143 30087 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 53.751 9.548 219000000 0 0 0 8373700 10060000 11628000 12006000 13047000 12007000 20038000 20482000 29195000 21999000 23266000 36901000 12546 2378 11449 106331;106332;106333;106334;106335;106336;106337;106338;106339;106340;106341;106342 85107;85108;85109;85110;85111;85112;85113 85112 6 ELEIGQAGSQR Unmodified 1186.5942 0.59421454 2476 Q15021 NCAPD2 Condensin complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 34.145 34.303 2 4.1749E-05 37668 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 136.57 83.85 125380000 0 0 0 8957400 8647000 15376000 10120000 8076500 0 14793000 13947000 21005000 0 0 24458000 12547 2476 11450 106343;106344;106345;106346;106347;106348;106349;106350;106351 85114;85115;85116;85117;85118;85119;85120;85121;85122;85123 85117 10 ELEIGQAGSQRAPSAK Unmodified 1640.8482 0.84819739 2476 Q15021 NCAPD2 Condensin complex subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.12 3.72 2 1 5 1 1 1 1 1 1 1 1 37.821 35.836 3 0.00016562 44961 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 70.98 37.776 121160000 24590000 5304500 73123000 0 0 0 0 4316200 5215500 0 4685900 0 3929300 0 0 12548 2476 11451 106352;106353;106354;106355;106356;106357;106358;106359 85124;85125;85126;85127;85128;85129;85130;85131;85132;85133;85134;85135;85136 85133 13 ELELAHR Unmodified 866.46102 0.46101552 2945 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 21.997 22.249 2 0.032282 23077 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 73.039 18.514 106360000 0 0 0 5224200 5339200 0 0 7056000 0 18249000 13089000 20271000 20307000 0 16824000 12549 2945 11452 106360;106361;106362;106363;106364;106365;106366;106367 85137;85138;85139 85138 3 ELELEDR Unmodified 902.43453 0.434526 3065 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 33.205 33.451 2 0.026251 36429 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 79.116 8.2035 45238000 0 0 0 0 3559500 3337500 3025700 0 2837800 3944500 6390500 5518500 5354300 5670700 5599100 12550 3065 11453 106368;106369;106370;106371;106372;106373;106374;106375;106376;106377 85140;85141;85142;85143;85144;85145 85143 6 ELELEVINLQK Unmodified 1326.7395 0.73948179 632 O95239 KIF4A Chromosome-associated kinesin KIF4A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 82.939 82.317 2 4.3172E-06 103390 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 119.86 72.666 82903000 8982000 0 0 1765200 4053700 4681700 4986900 4767800 5917300 9790000 5266000 7584300 0 9222100 15886000 12551 632 11454 106378;106379;106380;106381;106382;106383;106384;106385;106386;106387;106388;106389 85146;85147;85148;85149;85150;85151;85152;85153;85154;85155 85150 10 ELELQIGMK Oxidation (M) 1075.5583 0.5583463 3998 Q96T51 RUFY1 RUN and FYVE domain-containing protein 1 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 64.13 58.798 2 0.044548 75496 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.12 79.269 43265000 0 43265000 0 0 0 0 0 0 0 0 0 0 0 0 0 12552 3998 11455 106390;106391 85156 85156 0 ELELQILTEAIRNWEGDDIK Unmodified 2384.2224 0.22235496 2379 Q14155 ARHGEF7 Rho guanine nucleotide exchange factor 7 yes yes 0 0 1 By MS/MS 2 0 1 1 101.61 93.482 3 4.3539E-86 120296 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 155.88 126.4 25433000 25433000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12553 2379 11456 106392 85157;85158 85158 2 ELELSVPK Unmodified 913.51205 0.51204804 5057 Q9UPS6 SETD1B Histone-lysine N-methyltransferase SETD1B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.366 60.471 2 0.014742 68067 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.998 23.628 81414000 0 0 0 3456100 4203400 4257600 5257300 5750600 5243900 8621400 6549300 13959000 8928100 7699200 7488000 12554 5057 11457 106393;106394;106395;106396;106397;106398;106399;106400;106401;106402;106403;106404 85159;85160;85161;85162;85163;85164;85165;85166;85167;85168 85162 10 ELEMIGFIENNVSK Oxidation (M) 1637.7971 0.79707302 2557 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 2 2 2 1 77.442 77.485 2 1.4464E-14 89306 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 117.09 96.314 189550000 0 0 0 9700000 10754000 24665000 6085900 10661000 7655000 31614000 22837000 26619000 14815000 14919000 9231800 12555 2557 11458 106405;106406;106407;106408;106409;106410;106411;106412;106413;106414;106415;106416;106417;106418;106419;106420;106421;106422;106423;106424;106425;106426;106427 85169;85170;85171;85172;85173;85174;85175;85176;85177;85178;85179;85180;85181;85182;85183;85184;85185 85169 4207 11 ELEMIGFIENNVSK Unmodified 1621.8022 0.8021584 2557 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 89.594 89.722 2 0.001395 103878 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.719 28.375 5124300 0 0 0 0 0 0 0 0 0 2062400 0 0 0 0 3061900 12556 2557 11458 106428;106429 85186;85187 85187 2 ELENAEFIPMPDSPSPLSAAFSESEK Unmodified 2821.3004 0.30040686 3496 Q8TD19 NEK9 Serine/threonine-protein kinase Nek9 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 96.632 93.118 3 3.2019E-31 114709 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.05 96.34 57752000 0 54093000 3659000 0 0 0 0 0 0 0 0 0 0 0 0 12557 3496 11459 106430;106431;106432 85188;85189;85190 85188 3 ELENAEFIPMPDSPSPLSAAFSESEK Oxidation (M) 2837.2953 0.29532149 3496 Q8TD19 NEK9 Serine/threonine-protein kinase Nek9 yes yes 0 1 0 By MS/MS 3 0 1 1 92.669 89.441 3 2.5323E-06 107084 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 63.573 56.461 9752600 0 9752600 0 0 0 0 0 0 0 0 0 0 0 0 0 12558 3496 11459 106433 85191 85191 5013 1 ELENANDLLSATK Unmodified 1416.7096 0.70963822 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 65.932 64.749 2 3.0315E-32 74590 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 197.94 131.64 1263400000 17264000 714640000 0 29272000 24790000 31162000 38061000 26632000 25946000 49419000 56254000 59193000 47889000 47903000 94983000 12559 965 11460 106434;106435;106436;106437;106438;106439;106440;106441;106442;106443;106444;106445;106446;106447;106448 85192;85193;85194;85195;85196;85197;85198;85199;85200;85201;85202;85203;85204;85205;85206;85207;85208 85193 14 ELENEENQEEQGLEEK Unmodified 1945.8389 0.83887408 3239 Q8IWE2 FAM114A1 Protein NOXP20 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.68 3.04 1 2 16 2 1 1 2 1 1 1 2 2 1 2 1 1 1 38.182 36.895 2 0 41323 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 340.14 331.63 281040000 6097100 0 0 16429000 13794000 22581000 16774000 15285000 17130000 26174000 27933000 30748000 35262000 17410000 35423000 12560 3239 11461 106449;106450;106451;106452;106453;106454;106455;106456;106457;106458;106459;106460;106461;106462;106463;106464;106465;106466;106467 85209;85210;85211;85212;85213;85214;85215;85216;85217;85218;85219;85220;85221;85222;85223 85210 15 ELENLATSLEHYK Unmodified 1545.7675 0.76748745 3813 Q96EK5 KIAA1279 KIF1-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS 5.73 3.91 5 1 5 1 3 2 1 1 1 1 1 76.673 74.35 2;3 6.2846E-11 93707 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.87 108.67 472410000 14656000 376510000 44578000 0 0 8065500 0 0 0 7473600 3781900 0 0 3640000 13708000 12561 3813 11462 106468;106469;106470;106471;106472;106473;106474;106475;106476;106477;106478 85224;85225;85226;85227;85228;85229;85230 85224 4 ELENLQK Unmodified 872.46035 0.46034682 4468 Q9H9A6 LRRC40 Leucine-rich repeat-containing protein 40 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 20.838 21.086 2 0.015564 22180 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 117.7 32.392 189880000 0 0 0 0 11455000 18503000 16211000 11311000 0 21280000 22235000 27477000 20158000 18174000 23079000 12562 4468 11463 106479;106480;106481;106482;106483;106484;106485;106486;106487;106488 85231;85232;85233;85234 85231 3 ELENTALELSQK Unmodified 1373.7038 0.70382456 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 57.858 57.976 2 1.1894E-05 65859 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 132.88 81.529 154660000 0 0 0 6031100 8024700 12995000 12683000 7255300 11071000 11140000 17052000 18445000 14941000 12084000 22936000 12563 2291 11464 106489;106490;106491;106492;106493;106494;106495;106496;106497;106498;106499;106500 85235;85236;85237;85238;85239;85240;85241;85242;85243;85244;85245;85246;85247;85248 85240 14 ELEPEAAEEALENGPK Unmodified 1724.8105 0.81047448 4382 Q9H3P7 ACBD3 Golgi resident protein GCP60 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS 6.71 3.81 6 3 12 3 4 2 1 1 1 1 1 1 1 1 1 1 1 1 75.102 73.112 2;3 1.2068E-58 87778 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 137.73 134.3 915070000 46923000 760860000 4994200 6932300 5394200 17127000 7525900 5752200 5600400 10419000 9822100 7722200 5725600 7362400 12911000 12564 4382 11465 106501;106502;106503;106504;106505;106506;106507;106508;106509;106510;106511;106512;106513;106514;106515;106516;106517;106518;106519;106520;106521 85249;85250;85251;85252;85253;85254;85255;85256;85257;85258;85259;85260;85261;85262;85263;85264 85256 15 ELEPEMEFEIEPDK Oxidation (M) 1749.7655 0.76549812 4376 Q9H307 PNN Pinin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.8 3.92 2 3 1 1 1 1 1 76.969 72.132 2 2.4967E-18 90158 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.01 112.69 29122000 0 29122000 0 0 0 0 0 0 0 0 0 0 0 0 0 12565 4376 11466 106522;106523;106524;106525;106526 85265;85266;85267;85268;85269 85265 5831 5 ELEPEMEFEIEPDK Unmodified 1733.7706 0.7705835 4376 Q9H307 PNN Pinin yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS 8.08 3.33 2 1 9 1 2 1 1 1 1 1 1 1 1 1 81.471 80.694 2 2.189E-14 99111 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 142.08 128 65328000 0 40109000 0 955530 2615300 0 0 2122700 2243700 0 0 5582900 2059900 2917400 6721400 12566 4376 11466 106527;106528;106529;106530;106531;106532;106533;106534;106535;106536;106537;106538 85270;85271;85272;85273;85274;85275;85276;85277 85270 8 ELEPFLLR Unmodified 1015.5702 0.57023162 199 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 81.321 81.371 2 0.012535 94557 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 74.415 74.415 22136000 0 0 0 1453300 0 0 0 2418900 0 5053500 2876100 6420000 3914300 0 0 12567 199 11467 106539;106540;106541;106542;106543;106544 85278;85279;85280;85281 85281 4 ELEQANDDLER Unmodified 1330.6001 0.60008777 4729 Q9NXR1 NDE1 Nuclear distribution protein nudE homolog 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.337 31.38 2 1.0944E-05 33919 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 129.38 98.309 45095000 0 0 0 4069700 3583800 4948100 6556800 6302900 3749100 4316300 0 0 5937300 5631100 0 12568 4729 11468 106545;106546;106547;106548;106549;106550;106551;106552;106553;106554;106555;106556 85282;85283;85284;85285;85286;85287;85288;85289;85290;85291;85292;85293 85287 12 ELEQEEEER Unmodified 1189.5099 0.50987578 3662;2171 Q09472;Q92793 EP300;CREBBP Histone acetyltransferase p300;CREB-binding protein no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.356 14.518 2 0.0030604 14050 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 91.853 78.274 54192000 0 0 0 3162500 4398900 3573500 3927000 0 2234100 4806200 7241600 6519200 4218300 5568500 8542400 12569 2171;3662 11469 106557;106558;106559;106560;106561;106562;106563;106564;106565;106566;106567;106568 85294;85295;85296;85297;85298;85299;85300;85301;85302;85303;85304 85294 11 ELEQEEEERK Unmodified 1317.6048 0.6048388 3662;2171 Q09472;Q92793 EP300;CREBBP Histone acetyltransferase p300;CREB-binding protein no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 9.8654 9.9847 3 0.003213 8806 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 53.124 39.942 39625000 0 0 0 2007600 1864700 5086800 2453800 1701300 4190300 3557000 5829200 0 3502100 4659800 4772500 12570 2171;3662 11470 106569;106570;106571;106572;106573;106574;106575;106576;106577;106578;106579 85305;85306;85307;85308;85309;85310 85310 6 ELEQEEEERKK Unmodified 1445.6998 0.69980182 3662 Q92793 CREBBP CREB-binding protein yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.93 2.72 2 13 1 1 1 1 1 1 1 1 1 1 2 1 1 1 7.239 6.9467 3 0.0097435 5443 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 75.229 59.222 145220000 10703000 0 6469500 6111900 5026200 10252000 7031000 7213600 10841000 13181000 21883000 7087200 13003000 12571000 13845000 12571 3662 11471 106580;106581;106582;106583;106584;106585;106586;106587;106588;106589;106590;106591;106592;106593;106594 85311;85312;85313;85314 85313 3 ELEQEREDQK Unmodified 1302.6052 0.60517315 563 O75940 SMNDC1 Survival of motor neuron-related-splicing factor 30 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 9.65 1.53 1 19 1 2 2 2 1 1 2 2 1 1 1 2 2 6.8967 6.8335 2;3 2.8846E-05 6708 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 141.2 37.633 107920000 0 10556000 0 8799400 8558300 8643000 2560100 6586200 7009300 13221000 445990 2619100 3714800 9987600 25224000 12572 563 11472 106595;106596;106597;106598;106599;106600;106601;106602;106603;106604;106605;106606;106607;106608;106609;106610;106611;106612;106613;106614 85315;85316;85317;85318;85319 85318 5 ELEQERK Unmodified 930.47706 0.47705951 5006 Q9ULV0 MYO5B Unconventional myosin-Vb yes yes 0 0 1 By MS/MS 2 0 1 1 27.279 24.223 2 0.039564 30843 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 124.34 5.6563 4270800 0 0 4270800 0 0 0 0 0 0 0 0 0 0 0 0 12573 5006 11473 106615 85320 85320 0 ELEQFNSDIQK Unmodified 1349.6463 0.64630969 952 P11532 DMD Dystrophin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 30.286 30.524 3 0.03152 31935 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 26.786 14.518 108990000 0 0 0 0 5009900 5242300 8090100 7509900 9313400 7753000 9695600 18839000 13576000 9503900 14456000 12574 952 11474 106616;106617;106618;106619;106620;106621;106622;106623;106624;106625;106626 85321;85322 85321 2 ELEQGEPLEK Unmodified 1170.5768 0.57683314 4100 Q9BQL6 FERMT1 Fermitin family homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 33.913 29.27 2 0.011763 34448 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 87.639 35.852 35624000 0 35624000 0 0 0 0 0 0 0 0 0 0 0 0 0 12575 4100 11475 106627;106628;106629;106630;106631 85323;85324;85325;85326;85327 85323 5 ELEQQLQESAR Unmodified 1329.6525 0.6524577 3156 Q86UU1 PHLDB1 Pleckstrin homology-like domain family B member 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 38.972 39.212 2 0.00029326 43515 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 120.12 85.311 53893000 0 0 0 0 4265900 0 4878600 9389400 3304300 5774500 0 7779800 6909200 5630700 5960900 12576 3156 11476 106632;106633;106634;106635;106636;106637;106638;106639;106640 85328;85329;85330;85331;85332;85333;85334 85330 7 ELEQVCNPIISGLYQGAGGPGPGGFGAQGPK Unmodified 3054.4869 0.48691928 908 P0DMV9;P0DMV8 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 90.697 89.888 3 4.4064E-40 104391 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.236 80.829 512690000 7571500 43243000 0 3483600 5719500 5521700 2876700 12961000 6700500 69143000 54995000 29797000 2065500 17063000 251550000 12577 908 11477 106641;106642;106643;106644;106645;106646;106647;106648;106649;106650;106651;106652;106653;106654;106655 85335;85336;85337;85338;85339;85340;85341;85342;85343;85344;85345;85346;85347;85348;85349;85350 85340 16 ELEREESGAAESPALVTPDSEK Unmodified 2343.1078 0.10777871 3816 Q96EK9 KTI12 Protein KTI12 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.64 2.9 1 1 9 1 1 1 1 1 1 1 1 1 2 51.458 49.826 3 7.0167E-54 55730 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 105.96 101.2 135150000 16158000 7117400 0 13816000 10904000 0 20373000 11177000 0 0 0 0 0 11639000 43966000 12578 3816 11478 106656;106657;106658;106659;106660;106661;106662;106663;106664;106665;106666 85351;85352;85353;85354;85355;85356;85357;85358;85359;85360;85361;85362;85363 85360 13 ELERLIDK Unmodified 1014.571 0.5709599 5161 Q9Y3D6 FIS1 Mitochondrial fission 1 protein yes yes 0 0 1 By matching By MS/MS By MS/MS 2 0 3 1 1 1 43.837 38.544 2 0.044363 48581 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 175.91 58.508 79965000 16256000 29901000 33808000 0 0 0 0 0 0 0 0 0 0 0 0 12579 5161 11479 106667;106668;106669 85364 85364 0 ELESPLTPGK Unmodified 1069.5655 0.56554017 240 O15014 ZNF609 Zinc finger protein 609 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.329 47.495 2 0.0087229 53331 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 59.35 17.697 56050000 0 0 0 3631000 2818500 4115000 3404400 3824800 2669100 8073100 6766600 5072400 4539700 4743300 6392100 12580 240 11480 106670;106671;106672;106673;106674;106675;106676;106677;106678;106679;106680;106681 85365;85366;85367 85367 3 ELESQHSILK Unmodified 1182.6245 0.62445203 3242 Q8IWJ2 GCC2 GRIP and coiled-coil domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 1 2 35.579 31.711 2;3 0.033735 39939 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 80.455 16.19 35585000 0 12269000 23317000 0 0 0 0 0 0 0 0 0 0 0 0 12581 3242 11481 106682;106683;106684 85368;85369 85369 1 ELESQVSGLEK Unmodified 1217.6139 0.61394692 4817 Q9P2E9 RRBP1 Ribosome-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 42.922 43.187 2 0.0019298 47374 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 70.056 31.764 5234000 0 0 0 0 0 0 0 0 0 0 0 0 0 5234000 0 12582 4817 11482 106685;106686;106687 85370;85371;85372 85372 3 ELESRLQQVDGFEK Unmodified 1676.837 0.836964 4608 Q9NRN9 METTL5 Methyltransferase-like protein 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 65.29 59.298 3 0.00039616 76617 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.889 47.797 38767000 7642800 20100000 11024000 0 0 0 0 0 0 0 0 0 0 0 0 12583 4608 11483 106688;106689;106690 85373;85374;85375 85373 3 ELESSEEGGSAEER Unmodified 1507.6274 0.62742474 4488 Q9HAS0 C17orf75 Protein Njmu-R1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 15.058 15.257 2 1.1367E-32 14830 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 162.38 137.53 51699000 0 0 0 0 3198500 4114400 5641200 0 2942300 5720400 9457300 7387100 0 5447900 7789400 12584 4488 11484 106691;106692;106693;106694;106695;106696;106697;106698;106699;106700;106701 85376;85377;85378;85379;85380;85381;85382;85383;85384;85385;85386 85385 11 ELESVGIR Unmodified 901.4869 0.48689592 1753 P55039 DRG2 Developmentally-regulated GTP-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 39.354 39.687 2 0.025168 42850 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.917 7.13 59336000 0 0 0 10059000 0 0 0 0 0 0 0 13606000 9892800 0 25779000 12585 1753 11485 106702;106703;106704;106705 85387;85388;85389 85387 3 ELESVGIRLNK Unmodified 1256.7089 0.70885036 1753 P55039 DRG2 Developmentally-regulated GTP-binding protein 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 4 2 2 59.974 53.933 2;3 2.9744E-08 73131 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 162.49 102.06 133910000 119800000 0 14115000 0 0 0 0 0 0 0 0 0 0 0 0 12586 1753 11486 106706;106707;106708;106709 85390;85391;85392 85391 1 ELETFPPPEDLHDK Unmodified 1665.7886 0.78861683 4630 Q9NSV4 DIAPH3 Protein diaphanous homolog 3 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 2 1 61.849 61.028 2;3 7.2595E-07 77996 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.753 68.015 147800000 0 88740000 0 2248500 1703900 3986800 2809500 3133500 0 3895100 4452300 32695000 0 4132600 0 12587 4630 11487 106710;106711;106712;106713;106714;106715;106716;106717;106718;106719;106720;106721 85393;85394;85395;85396;85397;85398;85399;85400;85401;85402;85403 85400 10 ELETGPK Unmodified 772.39668 0.39668393 2399 Q14247 CTTN Src substrate cortactin yes yes 0 0 0 By MS/MS By MS/MS 2.67 0.471 1 2 1 2 11.494 7.9743 2 0.02866 11202 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.793 60.901 339940000 63622 339880000 0 0 0 0 0 0 0 0 0 0 0 0 0 12588 2399 11488 106722;106723;106724 85404 85404 1 ELETMRK Oxidation (M) 921.45897 0.45896661 1554 P48739 PITPNB Phosphatidylinositol transfer protein beta isoform yes yes 0 1 1 By MS/MS 2.5 0.5 1 1 2 5.8858 2.585 2 0.049682 4018 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 81.784 31.664 176980000 0 176980000 0 0 0 0 0 0 0 0 0 0 0 0 0 12589 1554 11489 106725;106726 85405 85405 0 ELETMRK Unmodified 905.46405 0.46405199 1554 P48739 PITPNB Phosphatidylinositol transfer protein beta isoform yes yes 0 0 1 By matching By MS/MS 2 0 2 1 1 13.223 10.067 2 0.027238 12669 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 146.94 67.491 79140000 25765000 0 53375000 0 0 0 0 0 0 0 0 0 0 0 0 12590 1554 11489 106727;106728 85406 85406 0 ELETQLLEQCTVDTSVAK Unmodified 2063.0093 0.0092506424 4759 Q9NZ32 ACTR10 Actin-related protein 10 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 79.807 75.766 2 1.2268E-95 94106 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 254.89 228.87 80161000 0 80161000 0 0 0 0 0 0 0 0 0 0 0 0 0 12591 4759 11490 106729;106730 85407;85408 85408 2 ELETSGGGISAR Unmodified 1175.5782 0.57823012 3768 Q96C00 ZBTB9 Zinc finger and BTB domain-containing protein 9 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.415 28.61 2 0.0043661 30446 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 77.14 32.763 93407000 0 0 0 4056900 6642300 4792000 5254100 4067500 2619300 9027700 7171600 26547000 9500400 6561600 7166500 12592 3768 11491 106731;106732;106733;106734;106735;106736;106737;106738;106739;106740;106741;106742 85409;85410;85411;85412;85413;85414;85415 85413 4 ELETSLR Unmodified 846.4447 0.44469675 664 O95466 FMNL1 Formin-like protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 28.722 29.149 2 0.03326 31269 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 72.138 3.74 60340000 0 0 0 0 0 0 8884000 0 0 0 12904000 10351000 10016000 10155000 8030100 12593 664 11492 106743;106744;106745;106746;106747;106748 85416 85416 1 ELETVCNDVLSLLDK Unmodified 1746.871 0.87096625 2109 Q04917 YWHAH 14-3-3 protein eta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 4 1 2 1 97.546 92.517 2 1.5391E-61 115702 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 186.02 142.71 341070000 31164000 303370000 6539200 0 0 0 0 0 0 0 0 0 0 0 0 12594 2109 11493 106749;106750;106751;106752 85417;85418;85419;85420;85421;85422 85420 5 ELETVDFK Unmodified 979.48623 0.48622722 1383 P36952 SERPINB5 Serpin B5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.43 2.72 4 2 1 3 2 1 1 52.392 47.514 2 0.01308 64075 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.299 47.333 3623500000 211560000 3251900000 31683000 0 0 0 0 0 0 0 0 0 0 0 128420000 12595 1383 11494 106753;106754;106755;106756;106757;106758;106759 85423;85424;85425;85426;85427;85428 85423 6 ELEVAEGGK Unmodified 930.46583 0.46582612 2612 Q16543 CDC37 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 22.092 21.309 2 0.0055928 22775 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 77.318 18.722 1434100000 112050000 718010000 0 26586000 23250000 47806000 37387000 0 22297000 60954000 76665000 76917000 51714000 71667000 108770000 12596 2612 11495 106760;106761;106762;106763;106764;106765;106766;106767;106768;106769;106770;106771;106772;106773 85429;85430;85431;85432;85433;85434;85435;85436;85437;85438;85439;85440;85441 85429 9 ELEVLQAK Unmodified 928.52295 0.52294707 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47.347 46.501 2 0.0071301 60043 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.11 41.924 253690000 9663700 109760000 0 8218400 7029500 11350000 8223600 8374700 6369500 12118000 12844000 17096000 10586000 12107000 19951000 12597 1286 11496 106774;106775;106776;106777;106778;106779;106780;106781;106782;106783;106784;106785;106786;106787 85442;85443;85444;85445;85446;85447;85448;85449;85450;85451;85452 85446 11 ELEVMTAK Unmodified 919.46847 0.46846866 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 37.549 38.006 2 0.033141 41975 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 53.891 9.4836 42238000 0 0 0 0 0 0 0 0 0 6260000 7581600 8217100 7063800 3877400 9238400 12598 2459 11497 106788;106789;106790;106791;106792;106793 85453;85454;85455;85456 85454 4 ELEVQHPAAK Unmodified 1120.5877 0.58767259 1641 P50990 CCT8 T-complex protein 1 subunit theta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.899 20.102 2 4.0049E-20 20563 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 187 123.44 429440000 0 0 0 21133000 16203000 40312000 27539000 24055000 17632000 39704000 49161000 45626000 35630000 35911000 76532000 12599 1641 11498 106794;106795;106796;106797;106798;106799;106800;106801;106802;106803;106804;106805 85457;85458;85459;85460;85461;85462;85463;85464;85465;85466;85467;85468 85458 10 ELEYFGLSAAILDK Unmodified 1567.8134 0.81337501 5245 Q9Y5Q9 GTF3C3 General transcription factor 3C polypeptide 3 yes yes 0 0 0 By MS/MS 2 0 1 1 97.191 89.06 2 2.0716E-23 115010 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 128.28 101.17 24908000 24908000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12600 5245 11499 106806 85469 85469 1 ELEYFGLSAAILDKNFR Unmodified 1985.0258 0.025827405 5245 Q9Y5Q9 GTF3C3 General transcription factor 3C polypeptide 3 yes yes 0 0 1 By matching By MS/MS By MS/MS By matching By matching By matching 10 0 6 1 1 1 1 1 1 55.578 55.773 3 0.0030334 63478 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 29.733 16.843 18929000 0 0 0 0 1945600 0 3124000 3800900 1245900 0 0 4910500 0 0 3902600 12601 5245 11500 106807;106808;106809;106810;106811;106812 85470 85470 1 ELFALHPSPDEEEPIER Unmodified 2006.9585 0.9585357 3933 Q96N67 DOCK7 Dedicator of cytokinesis protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 74.772 74.858 3 0.0005084 86207 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 54.292 43.633 100130000 0 0 0 0 5364500 19636000 7075500 10531000 0 12484000 9488900 17317000 8529900 9701000 0 12602 3933 11501 106813;106814;106815;106816;106817;106818;106819;106820;106821 85471;85472;85473;85474;85475;85476 85471 6 ELFDDPSYVNVQNLDK Unmodified 1894.8949 0.89487281 1245 P29353 SHC1 SHC-transforming protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 81.335 81.423 2 2.2619E-28 94278 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 123.84 111.62 62662000 0 0 0 0 2669700 7917600 3818300 7171100 4279800 11904000 0 0 4424800 4641800 15836000 12603 1245 11502 106822;106823;106824;106825;106826;106827;106828;106829;106830;106831 85477;85478;85479;85480;85481;85482;85483;85484;85485;85486 85482 10 ELFDELVK Unmodified 991.52261 0.52261272 1765 P55263 ADK Adenosine kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 3 9 1 1 1 1 1 1 1 1 1 1 1 1 78.41 77.188 2 0.0028258 95719 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.12 75.545 1061300000 101880000 821710000 33411000 3059100 0 3570600 2156000 2480600 0 3586600 12236000 14820000 0 13142000 49252000 12604 1765 11503 106832;106833;106834;106835;106836;106837;106838;106839;106840;106841;106842;106843 85487;85488;85489;85490;85491;85492;85493;85494;85495;85496;85497 85489 10 ELFDFYNK Unmodified 1074.5022 0.50221163 5281 Q9Y6G5 COMMD10 COMM domain-containing protein 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 77.418 76.907 2 0.018051 88309 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.757 39.307 60866000 0 27233000 1860400 1456100 1318900 2767500 2494600 1788700 1928900 0 3113700 3966100 2353000 3748100 6836900 12605 5281 11504 106844;106845;106846;106847;106848;106849;106850;106851;106852;106853;106854;106855;106856 85498;85499;85500;85501;85502 85499 5 ELFDQCENK Unmodified 1181.5023 0.50228798 4760 Q9NZ52 GGA3 ADP-ribosylation factor-binding protein GGA3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 33.641 33.845 2 0.043064 37526 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 51.066 34.29 21228000 0 0 0 0 2058900 2228000 2092900 1432100 1118600 2696000 0 4543900 0 2078700 2978800 12606 4760 11505 106857;106858;106859;106860;106861;106862;106863;106864;106865 85503 85503 1 ELFDYNLR Unmodified 1068.524 0.52400971 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 72.776 72.946 2 0.040979 83435 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.127 37.595 11171000 0 0 0 0 0 2547400 0 0 0 0 0 0 0 1567200 7056700 12607 2775 11506 106866;106867;106868 85504 85504 1 ELFEEVISK Unmodified 1092.5703 0.5702912 623 O95155 UBE4B Ubiquitin conjugation factor E4 B yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 76.3 72.489 2 0.025628 90483 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.332 2.1179 313780000 0 308810000 4968800 0 0 0 0 0 0 0 0 0 0 0 0 12608 623 11507 106869;106870 85505 85505 1 ELFEMAR Oxidation (M) 910.42185 0.42185282 1369 P35998 PSMC2 26S protease regulatory subunit 7 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 36.606 36.806 2 0.04898 41128 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 49.59 16.232 98368000 0 0 0 8391900 8413700 0 0 3237800 3381900 14930000 15153000 24623000 8135700 0 12101000 12609 1369 11508 106871;106872;106873;106874;106875;106876;106877;106878;106879 85506 85506 1 ELFESSTNNNK Unmodified 1281.5837 0.58370943 5014 Q9UM54 MYO6 Unconventional myosin-VI yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 28.316 28.382 2 0.0068298 30059 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.567 40.893 17701000 0 0 0 2415000 2042600 2767700 2082500 0 0 0 0 5957100 2435700 0 0 12610 5014 11509 106880;106881;106882;106883;106884;106885 85507 85507 1 ELFESWCTDK Unmodified 1313.5598 0.55980286 4963 Q9UKF6 CPSF3 Cleavage and polyadenylation specificity factor subunit 3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 69.498 69.566 2 0.0056189 79024 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 68.224 65.385 34131000 0 0 0 1283900 1041200 2571200 1441700 2075700 0 2875500 3766700 4978000 3445300 3265100 7387200 12611 4963 11510 106886;106887;106888;106889;106890;106891;106892;106893;106894;106895;106896 85508;85509;85510;85511;85512;85513 85512 6 ELFFEDSIDDAK Unmodified 1427.6456 0.64564098 4877 Q9UFF9 CNOT8 CCR4-NOT transcription complex subunit 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 80.81 79.504 2 2.5504E-05 99590 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.24 95.037 103630000 23663000 41579000 2160700 2374900 2691100 2632000 2465700 2824100 0 3169200 0 6137500 3095900 3146300 7694700 12612 4877 11511 106897;106898;106899;106900;106901;106902;106903;106904;106905;106906;106907;106908;106909;106910 85514;85515;85516;85517;85518;85519;85520;85521;85522;85523;85524;85525 85519 12 ELFGPELFR Unmodified 1106.576 0.57604528 1347 P35249 RFC4 Replication factor C subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 85.147 85.214 2 0.0035332 98768 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 89.752 76.925 371500000 0 0 0 15010000 16588000 30586000 24117000 36572000 26957000 26159000 30866000 43963000 27143000 27535000 66010000 12613 1347 11512 106911;106912;106913;106914;106915;106916;106917;106918;106919;106920;106921;106922 85526;85527;85528;85529;85530;85531;85532;85533;85534;85535;85536;85537;85538;85539 85536 14 ELFLAAVR Unmodified 917.53345 0.53345218 1627 P50542 PEX5 Peroxisomal targeting signal 1 receptor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 2 1 1 2 1 1 1 2 2 2 2 2 74.419 74.495 2 0.0048806 85412 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 108.98 54.457 156590000 0 0 0 8262400 2970300 5311100 10404000 6235200 5104300 8200100 18781000 19010000 20700000 20787000 30824000 12614 1627 11513 106923;106924;106925;106926;106927;106928;106929;106930;106931;106932;106933;106934;106935;106936;106937;106938;106939;106940;106941 85540;85541;85542;85543;85544;85545;85546;85547;85548;85549;85550 85542 11 ELFPQRSDNDLLK Unmodified 1573.81 0.81002097 4402 Q9H4L7 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 yes yes 0 0 1 By MS/MS By matching By MS/MS 2 0 3 1 1 1 71.862 66.016 3 0.0078011 87569 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 39.016 23.26 29985000 14516000 6989600 8479500 0 0 0 0 0 0 0 0 0 0 0 0 12615 4402 11514 106942;106943;106944 85551 85551 1 ELFPVLCQPDNPSVR Unmodified 1769.8771 0.87705468 2414 Q14562 DHX8 ATP-dependent RNA helicase DHX8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 82.971 83.025 2 0.00033085 95947 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 66.289 54.075 9213000 0 0 0 0 1539900 0 1576200 0 2857500 3239300 0 0 0 0 0 12616 2414 11515 106945;106946;106947;106948;106949 85552;85553;85554;85555;85556 85554 5 ELFPVLQK Unmodified 972.56442 0.56441796 2959 Q6PJG6 BRAT1 BRCA1-associated ATM activator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 75.915 75.941 2 0.012524 87583 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 74.439 22.751 33873000 0 0 0 2003700 2311100 4272500 2873500 0 0 0 4164700 6576800 0 4585500 7085600 12617 2959 11516 106950;106951;106952;106953;106954;106955;106956;106957;106958 85557;85558;85559;85560;85561;85562;85563 85561 7 ELFQTPDHTEESTTDDK Unmodified 1991.8596 0.85960952 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 0 By MS/MS 3 0 1 1 48.091 43.214 3 0.0016161 53749 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 56.339 56.162 3992600 0 3992600 0 0 0 0 0 0 0 0 0 0 0 0 0 12618 1492 11517 106959 85564;85565 85565 2 ELFQTPGHTEEAVAAGK Unmodified 1783.8741 0.87407779 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.44 3.98 4 5 1 2 1 1 1 1 1 1 56.597 53.935 2;3 1.7664E-18 70728 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.1 111.09 199500000 5052200 78928000 24651000 15087000 19079000 0 0 0 13832000 0 0 0 0 13725000 29142000 12619 1492 11518 106960;106961;106962;106963;106964;106965;106966;106967;106968 85566;85567;85568;85569;85570;85571;85572 85567 6 ELFQTPGHTEELVAAGK Unmodified 1825.921 0.92102798 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 7.42 3.66 3 1 8 1 2 1 1 1 1 1 1 1 1 1 69.571 67.866 3 9.1258E-07 77880 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 57.973 46.702 181990000 11712000 20511000 36485000 9130400 9991900 14004000 0 14862000 10384000 0 20073000 22351000 0 12489000 0 12620 1492 11519 106969;106970;106971;106972;106973;106974;106975;106976;106977;106978;106979;106980 85573;85574;85575;85576;85577;85578;85579;85580 85580 7 ELFQTPGHTEESMTDDK Unmodified 1963.8469 0.84693634 1492 P46013 MKI67 Antigen KI-67 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 51.905 51.883 3 3.6826E-07 57299 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.977 60.203 47280000 0 0 0 7367600 9278900 0 7133500 0 0 0 0 0 6174700 0 17326000 12621 1492 11520 106981;106982;106983;106984;106985 85581;85582;85583;85584 85582 4 ELFQTPGPSEESMTDEK Unmodified 1923.8408 0.84078833 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 66.873 66.061 2 1.9117E-18 82737 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 148.62 136.88 81987000 0 29534000 0 4238500 3270400 3773600 0 5236200 0 6210200 5310100 8121100 4982700 5311800 5998000 12622 1492 11521 106986;106987;106988;106989;106990;106991;106992;106993;106994;106995;106996;106997 85585;85586;85587;85588;85589;85590;85591;85592;85593;85594 85587 10 ELFQTPGPSEESMTDEK Oxidation (M) 1939.8357 0.83570295 1492 P46013 MKI67 Antigen KI-67 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 55.983 55.994 2 0.0018311 63459 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 45.257 45.257 33618000 0 0 0 2886300 2581000 4577700 3980600 3776900 2547100 4844700 4400300 0 4023300 0 0 12623 1492 11521 106998;106999;107000;107001;107002;107003;107004;107005;107006 85595 85595 2344 1 ELFQTPGTDKPTTDEK Unmodified 1805.8683 0.86832371 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.786 45.954 3 0.0013164 51648 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 35.473 31.144 123140000 0 0 0 8297100 5849100 7957800 9046200 5564100 8327600 11126000 10895000 18614000 11958000 9315900 16190000 12624 1492 11522 107007;107008;107009;107010;107011;107012;107013;107014;107015;107016;107017;107018 85596;85597;85598;85599;85600;85601;85602;85603;85604;85605 85598 9 ELFQTPICTDKPTTHEK Unmodified 2043.9935 0.993541 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 1 By MS/MS 2 0 1 1 59.465 55.663 4 0.044149 69327 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 29.341 20.244 4468800 0 0 4468800 0 0 0 0 0 0 0 0 0 0 0 0 12625 1492 11523 107019 85606 85606 1 ELFQTPVCTDKPTTHEK Unmodified 2029.9779 0.97789093 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 9.56 1.83 1 17 1 1 1 2 1 1 2 1 2 2 1 2 1 48.02 48.001 3;4 0.022968 61554 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 42.338 34.251 133010000 0 0 4517300 6825200 5024200 14477000 6705400 4883800 10724000 8665400 16942000 17967000 6848800 14139000 15293000 12626 1492 11524 107020;107021;107022;107023;107024;107025;107026;107027;107028;107029;107030;107031;107032;107033;107034;107035;107036;107037 85607;85608;85609;85610 85608 3 ELFSAPGHTEESMTIDK Oxidation (M) 1906.8619 0.86185812 1492 P46013 MKI67 Antigen KI-67 yes yes 0 1 0 By MS/MS 10 0 1 1 51.203 51.265 3 0.0024607 58000 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 48.177 29.764 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12627 1492 11525 107038 85611 85611 2345 1 ELFSEMLDK Oxidation (M) 1126.5216 0.52162644 4204 Q9BW83 IFT27 Intraflagellar transport protein 27 homolog yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 63.753 56.666 2 0.033625 72859 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 61.582 45.379 51251000 5398500 45852000 0 0 0 0 0 0 0 0 0 0 0 0 0 12628 4204 11526 107039;107040 85612 85612 1 ELFSEMLDK Unmodified 1110.5267 0.52671182 4204 Q9BW83 IFT27 Intraflagellar transport protein 27 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 4.83 3.67 3 1 2 1 2 1 1 1 79.621 76.567 2 0.0084462 88313 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.598 42.802 161660000 13696000 137210000 2986700 0 0 0 0 0 0 0 0 0 0 1786300 5975500 12629 4204 11526 107041;107042;107043;107044;107045;107046 85613;85614;85615;85616 85614 4 ELFSNLQEFAGPSGK Unmodified 1622.794 0.79403656 4450 Q9H8H3 METTL7A Methyltransferase-like protein 7A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.527 82.588 2 9.9974E-98 95509 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 196.24 167.51 135970000 0 0 0 3833800 8653400 10244000 7286400 10069000 7675100 20372000 14417000 17112000 7926600 9516300 18860000 12630 4450 11527 107047;107048;107049;107050;107051;107052;107053;107054;107055;107056;107057;107058 85617;85618;85619;85620;85621;85622;85623;85624;85625;85626;85627;85628;85629;85630 85624 14 ELFSQFGK Unmodified 954.48108 0.48108226 2268 Q13310 PABPC4 Polyadenylate-binding protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63.808 62.693 2 0.0079077 71480 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 88.029 37.989 795960000 28908000 189150000 26100000 35303000 32196000 44690000 41452000 47323000 28780000 45004000 55149000 65633000 48956000 48735000 58584000 12631 2268 11528 107059;107060;107061;107062;107063;107064;107065;107066;107067;107068;107069;107070;107071;107072;107073 85631;85632;85633;85634;85635;85636;85637;85638;85639;85640;85641 85634 9 ELFVMAR Oxidation (M) 880.44767 0.44767364 1876 P62195 PSMC5 26S protease regulatory subunit 8 yes yes 0 1 0 By matching By matching By MS/MS By matching By MS/MS By matching By matching 10 0 7 1 1 1 1 1 1 1 44.952 45.025 2 0.021995 50906 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 72.021 37.316 176270000 0 0 0 17677000 20051000 21043000 0 9315600 9298100 0 43063000 55826000 0 0 0 12632 1876 11529 107074;107075;107076;107077;107078;107079;107080 85642;85643 85642 2 ELFVMAR Unmodified 864.45276 0.45275902 1876 P62195 PSMC5 26S protease regulatory subunit 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 62.504 62.684 2 0.023344 71322 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 91.584 79.427 93155000 0 0 0 10169000 0 0 0 6323000 0 0 27466000 33998000 0 0 15199000 12633 1876 11529 107081;107082;107083;107084;107085 85644;85645;85646;85647 85645 4 ELGAFLQK Unmodified 904.50182 0.5018177 4999 Q9ULL5 PRR12 Proline-rich protein 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 58.445 58.448 2 0.043986 66667 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 49.058 9.2967 37851000 0 0 0 3267200 4307500 3577400 5043100 3032800 3784100 4758200 6135500 0 0 3945600 0 12634 4999 11530 107086;107087;107088;107089;107090;107091;107092;107093;107094 85648 85648 1 ELGATMDGFHR Unmodified 1232.5608 0.56080592 2183 Q12768 KIAA0196 WASH complex subunit strumpellin yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 46.725 46.844 3 0.026001 52636 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 30.331 20.798 33359000 0 0 0 1395000 1894400 4632400 0 2450800 1762800 3885900 3796300 0 3801400 4351300 5388800 12635 2183 11531 107095;107096;107097;107098;107099;107100;107101;107102;107103;107104 85649;85650 85650 2 ELGDHVTNLRK Unmodified 1280.6837 0.68369824 766 P02794 FTH1 Ferritin heavy chain;Ferritin heavy chain, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.15 3.37 3 10 3 1 1 1 1 1 1 1 1 1 1 27.189 25.979 2;3 0.00017022 27421 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 68.536 48.877 507140000 225390000 0 0 0 8884200 16234000 17847000 0 12624000 16516000 38418000 29432000 24990000 37318000 79489000 12636 766 11532 107105;107106;107107;107108;107109;107110;107111;107112;107113;107114;107115;107116;107117 85651;85652;85653;85654;85655;85656;85657;85658;85659;85660;85661;85662;85663;85664;85665 85654 15 ELGENLDQILR Unmodified 1298.683 0.68302954 3946 Q96P70 IPO9 Importin-9 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 80.584 80.43 2 0.042405 91990 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 46.819 20.714 13401000 0 0 0 1977400 0 0 0 0 0 0 0 0 0 11424000 0 12637 3946 11533 107118;107119 85666 85666 1 ELGETREREEQETTSSK Unmodified 2007.9345 0.93450579 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 12.841 12.951 3 1.4773E-13 12332 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 97.579 76.842 107430000 0 0 0 11371000 6139100 8680300 11261000 8443600 9520200 18680000 13986000 19351000 0 0 0 12638 965 11534 107120;107121;107122;107123;107124;107125;107126;107127;107128 85667;85668;85669;85670;85671;85672 85669 6 ELGEYFLFDPK Unmodified 1356.6602 0.66016884 417 O60610 DIAPH1 Protein diaphanous homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.56 3.86 3 1 5 1 2 1 1 1 1 1 1 89.983 87.981 2 0.0068754 102060 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.297 45.026 152380000 54716000 79336000 3981600 0 0 3006500 0 2447400 1854200 0 0 0 0 2135300 4904000 12639 417 11535 107129;107130;107131;107132;107133;107134;107135;107136;107137 85673;85674;85675;85676;85677;85678;85679;85680 85674 8 ELGEYFLFDPKK Unmodified 1484.7551 0.75513185 417 O60610 DIAPH1 Protein diaphanous homolog 1 yes yes 0 0 1 By MS/MS 2 0 1 1 88.727 80.597 3 0.012672 104871 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.113 34.629 4444800 4444800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12640 417 11536 107138 85681 85681 1 ELGFEMK Oxidation (M) 868.40005 0.40005474 1970 P78316 NOP14 Nucleolar protein 14 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 34.361 34.478 2 0.042778 37471 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 52.299 14.691 34547000 0 0 0 2214200 2710300 3635800 2414300 2149900 3630800 3910000 4279100 6960000 2642400 0 0 12641 1970 11537 107139;107140;107141;107142;107143;107144;107145;107146;107147;107148 85682;85683 85682 2 ELGGCSQAGNR Unmodified 1147.504 0.50401932 620 O95081 AGFG2 Arf-GAP domain and FG repeat-containing protein 2 yes yes 0 0 0 By MS/MS 10 0 1 1 9.3431 9.6958 2 0.031237 7497 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.303 23.152 1567400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1567400 12642 620 11538 107149 85684 85684 1 ELGGESNFGDALLDAGESMK Oxidation (M) 2054.9103 0.91026488 4074 Q99961 SH3GL1 Endophilin-A2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 2 1 6 2 1 1 1 1 1 1 1 81.847 80.764 2 5.0571E-239 99295 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 241.41 224.47 347200000 0 303140000 4239600 0 0 6532000 0 0 3873500 8261200 8451500 9107600 3598600 0 0 12643 4074 11539 107150;107151;107152;107153;107154;107155;107156;107157;107158 85685;85686;85687;85688;85689;85690;85691;85692;85693 85687 5578 9 ELGGESNFGDALLDAGESMK Unmodified 2038.9154 0.91535026 4074 Q99961 SH3GL1 Endophilin-A2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.29 0.452 5 2 1 4 2 89.693 85.517 2;3 5.6365E-119 106692 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 255.72 228.29 508100000 13123000 485550000 9428100 0 0 0 0 0 0 0 0 0 0 0 0 12644 4074 11539 107159;107160;107161;107162;107163;107164;107165 85694;85695;85696;85697;85698;85699 85694 5 ELGGLEGDPSPEEDEGIQK Unmodified 1997.9066 0.90655971 4134 Q9BT09 CNPY3 Protein canopy homolog 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 58.969 57.798 2 2.5728E-83 66277 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 172.99 159.33 138260000 4476600 24019000 0 6920500 6329600 5555300 9272800 6660600 5436400 7561300 15616000 12107000 8193300 9173100 16940000 12645 4134 11540 107166;107167;107168;107169;107170;107171;107172;107173;107174;107175;107176;107177;107178;107179;107180 85700;85701;85702;85703;85704;85705;85706;85707;85708;85709;85710;85711;85712;85713;85714 85702 15 ELGGLGMLSMGHVLIPQSDLR 2 Oxidation (M) 2254.145 0.14497304 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 2 0 By MS/MS 10 0 1 1 82.758 82.961 3 3.1808E-08 95679 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.952 60.764 11214000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11214000 12646 2930 11541 107181 85715 85715 4553;4554 1 ELGGPDYGK Unmodified 934.43961 0.43961137 5001 Q9ULR0 ISY1 Pre-mRNA-splicing factor ISY1 homolog yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 25.265 21.096 2 0.026491 27854 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.598 69.598 48062000 0 48062000 0 0 0 0 0 0 0 0 0 0 0 0 0 12647 5001 11542 107182;107183 85716 85716 1 ELGGTALQVAVVK Unmodified 1283.7449 0.74490152 4404 Q9H4Z2 ZNF335 Zinc finger protein 335 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS 10 0 5 1 1 1 1 1 71.819 71.869 2 0.0012213 83056 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 64.297 35.21 11529000 0 0 0 0 1925800 0 2062600 0 0 1928700 0 2318100 3293400 0 0 12648 4404 11543 107184;107185;107186;107187;107188 85717;85718 85717 2 ELGICPDDAAVIPIK Unmodified 1609.8385 0.83854391 966 P12273 PIP Prolactin-inducible protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 83.906 83.97 2 9.9442E-42 97293 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 163.12 139.8 502560000 0 0 0 42723000 34568000 52070000 17796000 43040000 20231000 36107000 53992000 61306000 25384000 50097000 65246000 12649 966 11544 107189;107190;107191;107192;107193;107194;107195;107196;107197;107198;107199;107200 85719;85720;85721;85722;85723;85724;85725;85726;85727;85728;85729;85730;85731 85725 13 ELGIIPTIIRDEELK Unmodified 1737.9877 0.98765098 3417 Q8NDH3 NPEPL1 Probable aminopeptidase NPEPL1 yes yes 0 0 1 By MS/MS 2 0 1 1 96.135 88.004 3 0.0029338 113713 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.414 45.705 11327000 11327000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12650 3417 11545 107201 85732 85732 1 ELGIPASVDLVSSDPSHMVASFSK Unmodified 2472.2206 0.2206404 371 O43815 STRN Striatin yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 94.746 90.689 3 1.2256E-07 112064 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.981 58.335 52553000 0 51590000 962940 0 0 0 0 0 0 0 0 0 0 0 0 12651 371 11546 107202;107203;107204 85733;85734;85735 85734 2 ELGISPIMTGK Unmodified 1144.6162 0.61619553 3065 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 yes yes 0 0 0 By MS/MS 2 0 1 1 76.215 71.378 2 0.0062567 89215 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.275 30.166 12164000 0 12164000 0 0 0 0 0 0 0 0 0 0 0 0 0 12652 3065 11547 107205 85736;85737 85737 2 ELGITALHIK Unmodified 1093.6495 0.64954457 1883 P62263 RPS14 40S ribosomal protein S14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71.1 70.11 2 0.0029779 79832 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 78.192 46.05 419380000 198350000 19591000 57501000 5035400 4776900 8025900 9809200 8784400 8928000 10874000 13288000 23152000 9733600 9707500 31829000 12653 1883 11548 107206;107207;107208;107209;107210;107211;107212;107213;107214;107215;107216;107217;107218;107219;107220 85738;85739;85740;85741;85742;85743;85744;85745;85746;85747;85748;85749;85750 85739 12 ELGIWEPLAVK Unmodified 1253.702 0.70197407 1570 P49368 CCT3 T-complex protein 1 subunit gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 88.145 86.871 2 0.00046268 105719 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 117.81 99.475 3083900000 149500000 2061300000 159490000 20570000 0 97185000 45120000 73768000 65613000 99078000 95689000 94793000 49669000 72119000 0 12654 1570 11549 107221;107222;107223;107224;107225;107226;107227;107228;107229;107230;107231;107232;107233;107234 85751;85752;85753;85754;85755;85756;85757;85758;85759;85760;85761;85762;85763 85758 11 ELGLDEGVDSLK Unmodified 1273.6402 0.64016167 3596 Q8WXX5 DNAJC9 DnaJ homolog subfamily C member 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 69.942 67.877 2 3.366E-08 78511 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 125.48 87.752 110950000 37888000 0 0 16564000 0 0 0 0 0 29295000 0 27207000 0 0 0 12655 3596 11550 107235;107236;107237;107238;107239;107240;107241;107242;107243;107244;107245;107246;107247 85764;85765;85766;85767;85768;85769;85770;85771;85772;85773;85774;85775;85776 85765 13 ELGLGLGLGLK Unmodified 1068.6543 0.6542956 4141 Q9BTD8 RBM42 RNA-binding protein 42 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 85.248 85.386 2 0.0087687 98586 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.193 39.682 12121000 0 0 0 0 0 0 1708500 0 0 3539200 0 0 0 2774400 4099200 12656 4141 11551 107248;107249;107250;107251 85777;85778 85777 2 ELGLGRHENAIK Unmodified 1335.7259 0.72589741 841 P07384 CAPN1 Calpain-1 catalytic subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 2 1 1 29.804 30.144 3 0.0063582 30943 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 34.898 14.469 393250000 0 0 0 0 0 38520000 19332000 29149000 41747000 21367000 29877000 80282000 35691000 0 97288000 12657 841 11552 107252;107253;107254;107255;107256;107257;107258;107259;107260;107261 85779;85780 85779 2 ELGLIRK Unmodified 827.52289 0.52288749 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 31.75 31.923 2 0.045479 34811 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 128.75 32.798 2599200000 0 0 0 65977000 129460000 207000000 374530000 467910000 770280000 128290000 174260000 217450000 0 17886000 46155000 12658 1714 11553 107262;107263;107264;107265;107266;107267;107268;107269;107270;107271;107272 85781 85781 0 ELGLNPEK Unmodified 898.476 0.47599688 4207 Q9BWD1 ACAT2 Acetyl-CoA acetyltransferase, cytosolic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 36.455 35.118 2 0.010984 45075 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.81 71.145 790890000 38751000 605510000 15011000 0 4590200 0 5147200 0 5110700 10058000 18064000 19310000 7350700 18650000 43340000 12659 4207 11554 107273;107274;107275;107276;107277;107278;107279;107280;107281;107282;107283;107284;107285 85782;85783;85784;85785 85783 4 ELGLPEELVSR Unmodified 1240.6663 0.66631685 1612 P49915 GMPS GMP synthase [glutamine-hydrolyzing] yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.958 79.016 2 0.0015109 91631 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 72.243 41.446 342100000 0 0 0 9486400 8824100 41013000 12888000 14258000 10212000 36594000 33902000 35455000 18866000 30377000 90220000 12660 1612 11555 107286;107287;107288;107289;107290;107291;107292;107293;107294;107295;107296;107297 85786;85787;85788;85789;85790;85791 85790 1 ELGLRTQALEMNK Oxidation (M) 1517.7872 0.78717704 2816 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 0 1 1 By MS/MS 2 0 1 1 56.69 48.509 3 0.0073974 66109 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.388 35.285 49639000 49639000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12661 2816 11556 107298 85792 85792 4452 1 ELGLRTQALEMNK Unmodified 1501.7923 0.79226242 2816 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 0 0 1 By MS/MS 2 0 1 1 68.524 60.229 3 0.0010145 80440 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.732 49.455 51221000 51221000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12662 2816 11556 107299 85793 85793 1 ELGLVDGQELAVADVTTPQTVLFK Unmodified 2542.353 0.35303478 3481 Q8TBC4 UBA3 NEDD8-activating enzyme E1 catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 1 3 1 97.513 93.121 2;3 3.4231E-69 115859 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 135.09 116.26 131410000 12212000 95566000 23637000 0 0 0 0 0 0 0 0 0 0 0 0 12663 3481 11557 107300;107301;107302;107303;107304 85794;85795;85796;85797 85794 3 ELGNDAYK Unmodified 908.42396 0.42396131 1313 P31948 STIP1 Stress-induced-phosphoprotein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 17.522 16.719 2 0.01524 16952 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 69.198 29.535 2198200000 58923000 1921200000 8461400 4097700 0 4792700 6674700 4785100 4437800 5521900 35014000 35452000 7849400 28665000 72259000 12664 1313 11558 107305;107306;107307;107308;107309;107310;107311;107312;107313;107314;107315;107316;107317;107318;107319 85798;85799;85800;85801;85802;85803;85804;85805;85806 85805 9 ELGNSLDK Unmodified 874.43961 0.43961137 3579 Q8WWY3 PRPF31 U4/U6 small nuclear ribonucleoprotein Prp31 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.31 3.1 1 2 10 1 2 1 1 1 1 1 1 1 1 1 1 20.228 19.399 2 0.0074056 20321 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 89.752 36.043 328330000 351550 139070000 0 17292000 14338000 18698000 18779000 12667000 15049000 23593000 0 23093000 0 19891000 25509000 12665 3579 11559 107320;107321;107322;107323;107324;107325;107326;107327;107328;107329;107330;107331;107332 85807;85808;85809;85810;85811 85807 5 ELGPDGEEAEGPGAGDGPPR Unmodified 1905.8341 0.83406347 1075 P18615 NELFE Negative elongation factor E yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.751 43.9 2 5.1518E-123 48145 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 187.16 181.88 165500000 0 0 0 10900000 10847000 9617400 12031000 9658100 9755100 26710000 0 26181000 15968000 11674000 22155000 12666 1075 11560 107333;107334;107335;107336;107337;107338;107339;107340;107341;107342;107343;107344 85812;85813;85814;85815;85816;85817;85818;85819;85820;85821;85822;85823 85815 12 ELGPYSSK Unmodified 879.4338 0.43379771 1057 P17655 CAPN2 Calpain-2 catalytic subunit yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.977 22.184 2 0.04296 22019 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.423 13.929 252210000 0 0 0 13286000 9176500 18992000 20123000 13146000 13869000 29617000 28977000 24506000 25383000 21197000 33940000 12667 1057 11561 107345;107346;107347;107348;107349;107350;107351;107352;107353;107354;107355;107356 85824;85825 85824 2 ELGQTGTR Unmodified 860.43519 0.4351947 5268 Q9Y679 AUP1 Ancient ubiquitous protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 7.562 7.6383 2 0.017183 6080 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 66.073 21.381 38254000 0 0 0 3014600 3781800 4244000 4649000 6556500 5912600 3719100 0 3201600 0 3174600 0 12668 5268 11562 107357;107358;107359;107360;107361;107362;107363;107364;107365 85826;85827 85827 2 ELGSATPEEYNTVVQK Unmodified 1763.8578 0.85775902 2310 Q13535 ATR Serine/threonine-protein kinase ATR yes yes 0 0 0 By MS/MS 2 0 1 1 61.423 53.168 3 0.040019 72004 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 14.346 6.8846 9833600 9833600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12669 2310 11563 107366 85828 85828 1 ELGSECGIEFDEEK Unmodified 1640.6876 0.68758215 1403 P39656 DDOST Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 60.836 60.234 2 0.016246 69528 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 52.903 52.712 8426900 0 0 0 5592900 2834000 0 0 0 0 0 0 0 0 0 0 12670 1403 11564 107367;107368 85829 85829 1 ELGSGGNIK Unmodified 873.4556 0.45559579 4511 Q9HCD6 TANC2 Protein TANC2 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 15.361 15.487 2 0.019171 14877 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 54.205 0.49527 15016000 0 0 0 0 0 2016500 2677800 2867900 1556600 0 0 0 2595200 3302200 0 12671 4511 11565 107369;107370;107371;107372;107373;107374 85830 85830 1 ELGSLTTANLMEK Oxidation (M) 1421.7072 0.70719538 2692 Q52LA3 LIN52 Protein lin-52 homolog yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.55 1 1 4 2 1 1 1 1 74.031 72.342 2 0.00017718 74580 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.182 66.248 70025000 0 34880000 0 0 0 9429200 0 0 7507700 0 0 0 0 7470800 10737000 12672 2692 11566 107375;107376;107377;107378;107379;107380 85831;85832 85832 4345 2 ELGSLTTANLMEK Unmodified 1405.7123 0.71228076 2692 Q52LA3 LIN52 Protein lin-52 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 76.485 71.647 2 0.0014939 89448 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.91 82.724 45811000 0 45811000 0 0 0 0 0 0 0 0 0 0 0 0 0 12673 2692 11566 107381 85833 85833 1 ELGSPEGVLVCPSIEELK Unmodified 1954.9921 0.99214402 2691 Q504Q3 PAN2 PAB-dependent poly(A)-specific ribonuclease subunit PAN2 yes yes 0 0 0 By MS/MS 2 0 1 1 90.082 85.186 2 2.4374E-07 105884 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.09 111.85 16327000 0 16327000 0 0 0 0 0 0 0 0 0 0 0 0 0 12674 2691 11567 107382 85834;85835 85834 2 ELGSSTNALR Unmodified 1046.5356 0.53563702 866 P08579 SNRPB2 U2 small nuclear ribonucleoprotein B'' yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.073 28.267 2 6.2672E-08 30348 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 153.08 94.166 535730000 0 0 0 24992000 35699000 30991000 40852000 40652000 23573000 49574000 56864000 61674000 52771000 45400000 72686000 12675 866 11568 107383;107384;107385;107386;107387;107388;107389;107390;107391;107392;107393;107394 85836;85837;85838;85839;85840;85841;85842;85843;85844;85845;85846;85847 85837 11 ELGSSVALYSR Unmodified 1180.6088 0.60880197 2210 Q12931 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 10 0 3 2 1 53.608 53.726 2 0.012638 61011 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 70.399 29.826 37512000 0 0 0 0 0 0 28828000 0 0 0 0 0 0 8684400 0 12676 2210 11569 107395;107396;107397 85848;85849;85850 85848 0 ELGTLIPK Unmodified 869.52222 0.52221879 1092 P19532;O14948 TFE3;TFEC Transcription factor E3;Transcription factor EC no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.205 59.317 2 0.022922 67688 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 60.76 24.574 128180000 0 0 0 8214800 7824200 8139400 12058000 7744600 8155100 13655000 13048000 12861000 10516000 10422000 15545000 12677 1092 11570 107398;107399;107400;107401;107402;107403;107404;107405;107406;107407;107408;107409 85851;85852 85851 2 ELGTVMR Oxidation (M) 820.41129 0.41128813 912;1218 P0DP25;P0DP24;P0DP23;P02585;P27482 TNNC2;CALML3 Troponin C, skeletal muscle;Calmodulin-like protein 3 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16.9 16.28 2 0.015419 16404 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 86.866 34.635 892840000 20282000 308150000 31352000 40163000 23403000 29510000 27214000 36690000 21214000 26173000 79810000 96134000 28661000 0 124080000 12678 912;1218 11571 107410;107411;107412;107413;107414;107415;107416;107417;107418;107419;107420;107421;107422;107423 85853;85854;85855;85856;85857;85858;85859;85860;85861;85862 85853 1177 10 ELGTVMR Unmodified 804.41637 0.41637351 912;1218 P0DP25;P0DP24;P0DP23;P02585;P27482 TNNC2;CALML3 Troponin C, skeletal muscle;Calmodulin-like protein 3 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.042 30.232 2 0.024035 32107 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 83.614 37.244 1043100000 0 0 0 63094000 47140000 40976000 41308000 60313000 25332000 45592000 143090000 175230000 61033000 79151000 260820000 12679 912;1218 11571 107424;107425;107426;107427;107428;107429;107430;107431;107432;107433;107434;107435 85863;85864;85865 85864 3 ELGVGIALR Unmodified 926.55492 0.5549159 2054 Q01469 FABP5 Fatty acid-binding protein, epidermal yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 70.492 70.455 2 0.031208 82519 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 47.849 26.302 28066000 0 0 0 6047600 2341100 2627800 0 5655800 0 3978700 0 4448900 0 2965700 0 12680 2054 11572 107436;107437;107438;107439;107440;107441;107442 85866;85867 85867 2 ELGVGQMDWGNNLGLR Oxidation (M) 1773.8468 0.84681718 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 1 0 By matching By MS/MS By matching By matching By matching By matching By matching 10 0 7 1 1 1 1 1 1 1 79.53 79.694 2 0.00078737 92032 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 53.013 42.088 31126000 0 0 0 0 0 0 1865000 4261800 3563500 0 5859400 0 2268700 3950900 9356400 12681 4285 11573 107443;107444;107445;107446;107447;107448;107449 85868 85868 5743 1 ELGVSTNANYK Unmodified 1194.5881 0.58806652 3568 Q8WVY7 UBLCP1 Ubiquitin-like domain-containing CTD phosphatase 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 36.32 35.179 2 5.454E-09 44032 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.82 101.37 650870000 19025000 605660000 0 0 0 0 2563200 2301900 0 0 3714200 3066000 0 5556100 8991700 12682 3568 11574 107450;107451;107452;107453;107454;107455;107456;107457 85869;85870;85871;85872 85869 4 ELGYSLEQR Unmodified 1093.5404 0.54038805 4708 Q9NWY4;A8MVJ9 C4orf27 UPF0609 protein C4orf27;Putative UPF0609 protein C4orf27-like yes no 0 0 0 By matching By MS/MS 10 0 2 1 1 46.256 46.847 2 0.026097 51699 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.96 20.154 8699500 0 0 0 0 0 0 0 0 0 0 2361800 0 0 0 6337600 12683 4708 11575 107458;107459 85873 85873 1 ELHDAMK Unmodified 842.39564 0.39563807 2812 Q5VT79;P13928 ANXA8L2;ANXA8 Annexin A8-like protein 2;Annexin A8 yes no 0 0 0 By MS/MS 2.5 0.5 1 1 2 9.7806 6.472 2 0.0098563 9387 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145.04 98 44931000 0 44931000 0 0 0 0 0 0 0 0 0 0 0 0 0 12684 2812 11576 107460;107461 85874 85874 1 ELHDSEGQQLALNK Unmodified 1580.7794 0.77944912 2809 Q5VT25 CDC42BPA Serine/threonine-protein kinase MRCK alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.86 3.4 1 1 5 2 1 1 1 1 1 37.79 36.611 3 1.0804E-22 45212 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 120.57 109.31 47405000 0 22833000 0 0 0 3710900 0 0 0 2967800 0 0 5423900 4546500 7922800 12685 2809 11577 107462;107463;107464;107465;107466;107467;107468 85875;85876;85877;85878;85879 85877 4 ELHENVLDK Unmodified 1095.556 0.55603811 360 O43719 HTATSF1 HIV Tat-specific factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.12 2.32 1 7 1 1 1 1 1 1 1 1 27.834 27.517 2 3.8224E-116 29530 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 223.08 149.46 614380000 0 392390000 0 8241200 0 0 0 9876600 0 24392000 42540000 58968000 39402000 38563000 0 12686 360 11578 107469;107470;107471;107472;107473;107474;107475;107476 85880;85881;85882;85883;85884;85885;85886;85887 85885 6 ELHESAIVK Unmodified 1024.5553 0.55530983 4605 Q9NRL2 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A yes yes 0 0 0 By MS/MS 2 0 1 1 27.788 24.682 2 0.020472 31329 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 75.213 13.25 3720600 0 0 3720600 0 0 0 0 0 0 0 0 0 0 0 0 12687 4605 11579 107477 85888 85888 1 ELHGTSIVPK Unmodified 1079.5975 0.597509 5109 Q9Y2K7 KDM2A Lysine-specific demethylase 2A yes yes 0 0 0 By MS/MS 2 0 1 1 40.91 34.23 2 0.015274 47369 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.625 36.483 3886800 3886800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12688 5109 11580 107478 85889 85889 1 ELHINLIPNK Unmodified 1189.6819 0.68190733 850 P07900;Q14568 HSP90AA1;HSP90AA2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.39 3.89 15 4 22 10 6 3 2 1 2 2 2 1 2 2 1 2 2 3 72.209 70.498 2;3 1.6201E-14 86937 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 217.02 185.71 15849000000 7229500000 2424300000 1207800000 126200000 90683000 579490000 227100000 197770000 181740000 291310000 533850000 345570000 353490000 650210000 1409600000 12689 850 11581 107479;107480;107481;107482;107483;107484;107485;107486;107487;107488;107489;107490;107491;107492;107493;107494;107495;107496;107497;107498;107499;107500;107501;107502;107503;107504;107505;107506;107507;107508;107509;107510;107511;107512;107513;107514;107515;107516;107517;107518;107519 85890;85891;85892;85893;85894;85895;85896;85897;85898;85899;85900;85901;85902;85903;85904;85905;85906;85907;85908;85909;85910;85911;85912;85913;85914;85915;85916;85917;85918;85919;85920;85921;85922;85923;85924;85925;85926;85927;85928;85929;85930;85931;85932;85933;85934;85935;85936;85937;85938;85939;85940;85941;85942;85943;85944;85945;85946;85947;85948;85949;85950;85951;85952;85953;85954;85955 85941 62 ELHNALQEVR Unmodified 1207.6309 0.63093439 5379 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 4 1 2 1 9.6907 6.5312 3 0.019951 9504 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 38.303 12.866 + 52584000 37590000 7629000 7365000 0 0 0 0 0 0 0 0 0 0 0 0 12690 5379 11582 107520;107521;107522;107523 85956 85956 1 ELHPVLK Unmodified 834.49634 0.49633839 95 CON__Q5D862;Q5D862 FLG2 Filaggrin-2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26.537 26.065 2 0.017119 27474 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 114.59 56.775 + 1118100000 27799000 0 49128000 383910000 30803000 48875000 37549000 85895000 25822000 87907000 54516000 135570000 96912000 23803000 29633000 12691 95 11583 107524;107525;107526;107527;107528;107529;107530;107531;107532;107533;107534;107535;107536;107537 85957;85958;85959;85960;85961;85962;85963;85964;85965 85958 8 ELHQLQNEK Unmodified 1137.5778 0.57783619 4365 Q9H2G2 SLK STE20-like serine/threonine-protein kinase yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 12.251 12.329 2 0.0071283 11524 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 73.248 51.117 12882000 0 0 0 956320 759610 2247300 0 0 0 0 0 0 2288900 1805000 4824900 12692 4365 11584 107538;107539;107540;107541;107542;107543;107544 85966;85967 85966 2 ELHSTATQLAADLLK Unmodified 1609.8675 0.86753585 4859 Q9UBT7 CTNNAL1 Alpha-catulin yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 88.538 82.052 3 6.2568E-07 104027 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.01 67.833 44713000 13797000 30917000 0 0 0 0 0 0 0 0 0 0 0 0 0 12693 4859 11585 107545;107546 85968;85969 85968 2 ELHSWEPEPDVR Unmodified 1492.6947 0.69465686 4154 Q9BTY7 HGH1 Protein HGH1 homolog yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 51.091 51.182 3 0.0082238 56585 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.49 55.211 34695000 0 0 0 0 5276000 0 0 0 0 0 0 0 0 0 29419000 12694 4154 11586 107547;107548 85970 85970 0 ELHTADSVVNGSAQADVPK Unmodified 1936.949 0.94903365 3816 Q96EK9 KTI12 Protein KTI12 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.143 47.308 3 6.3728E-05 52873 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.253 49.399 107590000 0 0 0 4795600 5140900 11254000 8760800 8898300 7013700 13416000 10356000 13143000 8954500 5373200 10480000 12695 3816 11587 107549;107550;107551;107552;107553;107554;107555;107556;107557;107558;107559;107560 85971;85972;85973;85974;85975;85976;85977;85978;85979;85980;85981;85982;85983;85984;85985 85982 15 ELHVGENQIEMLEAEHLK Oxidation (M) 2134.0365 0.036468446 4468 Q9H9A6 LRRC40 Leucine-rich repeat-containing protein 40 yes yes 0 1 0 By MS/MS By MS/MS 2.4 0.49 3 2 3 2 78.743 73.091 3;4 1.2541E-05 92811 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.751 73.586 76607000 44230000 32376000 0 0 0 0 0 0 0 0 0 0 0 0 0 12696 4468 11588 107561;107562;107563;107564;107565 85986;85987;85988;85989;85990 85986 5904 5 ELHVGENQIEMLEAEHLK Unmodified 2118.0416 0.041553824 4468 Q9H9A6 LRRC40 Leucine-rich repeat-containing protein 40 yes yes 0 0 0 By MS/MS By MS/MS 2.2 0.4 4 1 2 3 82.275 76.474 3;4 3.9436E-55 97589 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 150.39 141.6 107630000 61946000 45688000 0 0 0 0 0 0 0 0 0 0 0 0 0 12697 4468 11588 107566;107567;107568;107569;107570 85991;85992;85993;85994;85995 85994 5 ELIAESK Unmodified 788.42798 0.42798405 3686 Q92917 GPKOW G patch domain and KOW motifs-containing protein yes yes 0 0 0 By MS/MS By matching By MS/MS 4.67 3.77 2 1 1 1 1 20.481 18.354 2 0.024805 23424 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.69 22.24 272740000 0 248880000 2771000 0 0 0 0 0 0 0 0 0 21085000 0 0 12698 3686 11589 107571;107572;107573 85996;85997 85996 2 ELIDPRLIIESPSNTSSTEPA Unmodified 2268.1485 0.14852132 1397 P38432 COIL Coilin yes yes 0 0 1 By MS/MS 2 0 1 1 90.791 85.895 2 8.901E-09 106740 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.944 77.657 26936000 0 26936000 0 0 0 0 0 0 0 0 0 0 0 0 0 12699 1397 11590 107574 85998 85998 1 ELIEELIAK Unmodified 1056.6067 0.6066767 1970 P78316 NOP14 Nucleolar protein 14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 81.049 80.021 2 0.0034358 92604 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 106.04 49.321 196100000 9470200 50178000 0 5678600 10009000 12114000 8523400 10680000 12843000 12458000 11242000 16561000 9101400 9000100 18245000 12700 1970 11591 107575;107576;107577;107578;107579;107580;107581;107582;107583;107584;107585;107586;107587;107588;107589 85999;86000;86001;86002;86003;86004;86005;86006;86007;86008;86009;86010;86011 86000 12 ELIEIGCEDK Unmodified 1204.5646 0.56455389 1418 P40692 MLH1 DNA mismatch repair protein Mlh1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 55.388 55.516 2 0.0021721 61748 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.862 65.237 104620000 0 0 0 4689600 6459300 8307000 7647400 0 6861700 10980000 15907000 10082000 8866800 9213400 15603000 12701 1418 11592 107590;107591;107592;107593;107594;107595;107596;107597;107598;107599;107600 86012;86013;86014;86015;86016;86017;86018;86019;86020;86021;86022 86015 9 ELIENSLDAGATSVDVK Unmodified 1759.884 0.88397377 1738 P54277 PMS1 PMS1 protein homolog 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 72.321 72.347 2 1.2843E-13 83252 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 94.122 52.417 40540000 0 0 0 2174200 3434400 3801000 3386400 0 2643500 4757800 5902100 6442000 3854900 4144000 0 12702 1738 11593 107601;107602;107603;107604;107605;107606;107607;107608;107609;107610 86023;86024;86025;86026;86027;86028;86029;86030 86026 8 ELIEQLR Unmodified 899.50763 0.50763136 1313 P31948 STIP1 Stress-induced-phosphoprotein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 49.836 50.221 2 0.024216 55806 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 104.11 6.5147 95336000 0 0 0 0 0 0 6971200 0 0 0 0 0 0 0 88365000 12703 1313 11594 107611;107612;107613 86031;86032;86033;86034 86034 4 ELIERIPELNK Unmodified 1352.7664 0.76636524 762 P02786 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 68.342 67.179 3 0.0018041 75893 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.979 36.947 53074000 6218800 8422900 0 0 0 5244500 2811700 6259700 3062000 6468800 0 0 4075300 3581800 6928900 12704 762 11595 107614;107615;107616;107617;107618;107619;107620;107621;107622;107623 86035;86036;86037;86038;86039;86040;86041;86042;86043 86038 9 ELIEYFK Unmodified 940.49058 0.49058431 2395 Q14232 EIF2B1 Translation initiation factor eIF-2B subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.53 2.94 1 2 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 70.606 69.82 2 0.023276 88625 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.2 74.482 318130000 595640 156230000 0 7185900 7495300 17312000 10445000 8050700 7181400 15487000 17301000 18956000 8607100 11286000 31997000 12705 2395 11596 107624;107625;107626;107627;107628;107629;107630;107631;107632;107633;107634;107635;107636;107637;107638 86044;86045;86046;86047;86048;86049;86050;86051;86052;86053;86054 86046 11 ELIFEETAR Unmodified 1106.5608 0.56078914 1236 P28482 MAPK1 Mitogen-activated protein kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.253 62.351 2 0.0037643 71201 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 96.253 40.242 246890000 0 0 0 11083000 11200000 23168000 17328000 11917000 12747000 27769000 28765000 26768000 18946000 15140000 42061000 12706 1236 11597 107639;107640;107641;107642;107643;107644;107645;107646;107647;107648;107649;107650 86055;86056;86057;86058;86059;86060;86061;86062;86063;86064;86065;86066 86061 12 ELIFQETAR Unmodified 1105.5768 0.57677356 1215 P27361 MAPK3 Mitogen-activated protein kinase 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 58.914 59.096 2 0.0051099 67798 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 83.313 28.601 525260000 0 0 0 0 9557200 0 428140000 0 0 19009000 0 27664000 14105000 0 26789000 12707 1215 11598 107651;107652;107653;107654;107655;107656 86067;86068 86067 2 ELIIGDR Unmodified 814.45487 0.45486751 1192 P25705 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 42.727 42.897 2 0.043924 47153 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 67.035 10.94 148080000 0 0 0 23493000 13532000 12717000 0 0 12652000 16425000 23367000 22099000 0 3006700 20784000 12708 1192 11599 107657;107658;107659;107660;107661;107662;107663;107664;107665 86069 86069 1 ELIINEILVMK Oxidation (M) 1329.7578 0.75777439 2248 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 89.065 88.014 2 0.0020471 102518 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 64.711 49.451 35677000 17076000 0 0 0 0 2874100 1742800 0 0 4973000 3201900 3180200 0 2629600 0 12709 2248 11600 107666;107667;107668;107669;107670;107671;107672 86070;86071;86072;86073;86074;86075;86076 86071 3648 7 ELIINEILVMK Unmodified 1313.7629 0.76285977 2248 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 yes yes 0 0 0 By MS/MS 2 0 1 1 98.176 90.045 2 4.3169E-05 116182 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 134.25 124.47 29650000 29650000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12710 2248 11600 107673 86077;86078 86077 2 ELIKPPTILR Unmodified 1178.7387 0.73869393 5117;1724 P53677;Q9Y2T2 AP3M2;AP3M1 AP-3 complex subunit mu-2;AP-3 complex subunit mu-1 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 69.819 70.025 3 0.0012837 80435 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 82.261 69.645 88760000 0 0 0 0 0 9947100 0 6408200 6251100 12591000 10987000 10532000 8358800 9159400 14526000 12711 1724;5117 11601 107674;107675;107676;107677;107678;107679;107680;107681;107682;107683 86079;86080;86081;86082;86083;86084;86085;86086;86087;86088 86087 8 ELILFSNSDNER Unmodified 1435.6943 0.69432251 946;2084 P11388;Q02880 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2-beta no no 0 0 0 By MS/MS 10 0 1 1 74.264 73.716 2 0.011601 85514 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 62.303 27.079 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12712 946;2084 11602 107684 86089 86089 1 ELILGSETPSSPR Unmodified 1384.7198 0.71980898 3739 Q96AP0 ACD Adrenocortical dysplasia protein homolog yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 58.368 58.428 2 0.00070877 66647 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 72.2 13.22 21623000 0 0 0 0 1880400 3418100 3344200 0 0 4318300 4641600 0 0 4020700 0 12713 3739 11603 107685;107686;107687;107688;107689;107690;107691 86090;86091;86092;86093 86091 4 ELILNDLPASTPASK Unmodified 1567.8457 0.84573777 2103 Q04725 TLE2 Transducin-like enhancer protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 77.627 77.105 2 0.00042857 88302 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 83.182 38.865 195390000 0 109920000 0 3284300 4781200 6195300 6401800 6351800 5441300 7563400 7540200 9768100 8767900 6905500 12463000 12714 2103 11604 107692;107693;107694;107695;107696;107697;107698;107699;107700;107701;107702;107703;107704;107705 86094;86095;86096;86097;86098;86099;86100;86101;86102;86103;86104;86105 86101 12 ELILSGTLNPIK Unmodified 1296.7653 0.76530261 3115 Q7Z6K3 PTAR1 Protein prenyltransferase alpha subunit repeat-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 86.827 82.018 2 0.00020755 102026 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.5 74.451 34520000 0 34520000 0 0 0 0 0 0 0 0 0 0 0 0 0 12715 3115 11605 107706 86106 86106 1 ELIPFTEMTNASEK Oxidation (M) 1624.7654 0.76543854 3078 Q7Z333 SETX Probable helicase senataxin yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 75.671 71.416 2 0.0007172 89394 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.659 54.804 12152000 0 12152000 0 0 0 0 0 0 0 0 0 0 0 0 0 12716 3078 11606 107707;107708 86107;86108 86107 4693 2 ELIPQESPR Unmodified 1067.5611 0.56112349 3795 Q96DF8 DGCR14 Protein DGCR14 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 41.359 41.563 2 0.034739 46300 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 46.39 9.5483 9877500 0 0 0 0 0 0 0 0 5194500 0 0 0 0 4683000 0 12717 3795 11607 107709;107710 86109 86109 1 ELIPTEEALR Unmodified 1169.6292 0.62920306 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 66.272 66.315 2 0.013695 75991 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 51.113 17.471 136770000 0 0 0 10329000 11560000 11442000 10705000 11007000 8291500 10385000 14281000 21345000 13929000 13493000 0 12718 2501 11608 107711;107712;107713;107714;107715;107716;107717;107718;107719;107720;107721 86110;86111;86112 86111 2 ELIQEYGAQSGGLEK Unmodified 1620.7995 0.79951586 1802 P58107 EPPK1 Epiplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 57.208 57.431 2 2.6367E-07 65263 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 110.66 68.786 13224000 0 0 0 0 0 0 4138400 4095000 0 0 4990400 0 0 0 0 12719 1802 11609 107722;107723;107724;107725;107726 86113;86114;86115;86116;86117 86114 5 ELIQGGEYFSDEQMR Oxidation (M) 1816.7938 0.79377856 3834 Q96F63 CCDC97 Coiled-coil domain-containing protein 97 yes yes 0 1 0 By matching By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 65.014 65.38 2 0.00012316 74800 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 69.979 51.92 12679000 0 0 0 0 0 0 1500000 0 0 0 3333500 3574100 0 0 4271600 12720 3834 11610 107727;107728;107729;107730 86118;86119 86119 5352 2 ELIQNGFTR Unmodified 1076.5615 0.56145784 3203 Q86Y37 CACUL1 CDK2-associated and cullin domain-containing protein 1 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 48.908 49.207 2 0.012712 55500 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 60.895 30.476 13186000 0 0 0 0 0 0 0 0 0 6287400 6898700 0 0 0 0 12721 3203 11611 107731;107732 86120 86120 1 ELIREVEMGPFK Oxidation (M) 1462.749 0.74900062 3170 Q86VP6 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 66.298 65.005 3 0.0056056 85318 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.598 46.152 271710000 148790000 34874000 22448000 2744100 2033800 0 4237000 4245900 7068600 12234000 9308800 10767000 6177300 6782600 0 12722 3170 11612 107733;107734;107735;107736;107737;107738;107739;107740;107741;107742;107743;107744;107745 86121;86122;86123;86124 86122 4787 3 ELIREVEMGPFK Unmodified 1446.7541 0.754086 3170 Q86VP6 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 80.002 74.845 2;3 1.0263E-07 94437 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.87 82.449 68815000 26038000 35726000 7051800 0 0 0 0 0 0 0 0 0 0 0 0 12723 3170 11612 107746;107747;107748 86125;86126;86127 86125 3 ELIRQAALQQTK Unmodified 1397.7991 0.79906235 1096 P19838 NFKB1 Nuclear factor NF-kappa-B p105 subunit;Nuclear factor NF-kappa-B p50 subunit yes yes 0 0 1 By MS/MS 2 0 1 1 45.072 38.207 3 1.456E-05 52336 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.24 77.458 69743000 69743000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12724 1096 11613 107749 86128 86128 1 ELISDNQYR Unmodified 1136.5462 0.54620171 1183 P25205 MCM3 DNA replication licensing factor MCM3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 36.72 37.068 2 0.011979 39729 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.999 28.203 57528000 0 0 0 0 0 6656900 4163100 0 3898400 0 7004800 11516000 7486500 5510900 11292000 12725 1183 11614 107750;107751;107752;107753;107754;107755;107756;107757 86129;86130;86131;86132 86129 4 ELISDPYGNLK Unmodified 1247.6398 0.63976774 581 O94762 RECQL5 ATP-dependent DNA helicase Q5 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 65.328 65.669 2 0.0053119 75211 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 59.35 33.791 7255600 0 0 0 0 0 0 0 0 0 4310300 0 0 0 0 2945300 12726 581 11615 107758;107759 86133 86133 1 ELISFLSEPEILVK Unmodified 1615.9073 0.9072754 25 A6NDU8 C5orf51 UPF0600 protein C5orf51 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.89 3.63 4 2 3 2 3 1 1 1 1 97.323 94.388 2 9.7813E-30 116388 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 144.17 134.22 205200000 40112000 150830000 5444500 0 0 0 0 0 0 3779500 1876600 0 0 0 3159100 12727 25 11616 107760;107761;107762;107763;107764;107765;107766;107767;107768 86134;86135;86136;86137;86138;86139;86140;86141;86142;86143 86135 10 ELISNASDALDK Unmodified 1274.6354 0.63541065 862;1002 P08238;P14625 HSP90AB1;HSP90B1 Heat shock protein HSP 90-beta;Endoplasmin no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.78 2.74 1 2 15 1 2 1 1 1 1 1 1 2 2 2 1 1 1 53.285 52.331 2 9.1139E-20 60238 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 159.4 117.29 24574000000 648360 1038400000 0 866410000 801440000 2454100000 1166100000 1114800000 796210000 2387700000 2957000000 2271400000 1904900000 1983600000 4830900000 12728 862;1002 11617 107769;107770;107771;107772;107773;107774;107775;107776;107777;107778;107779;107780;107781;107782;107783;107784;107785;107786 86144;86145;86146;86147;86148;86149;86150;86151;86152;86153;86154;86155;86156;86157;86158;86159;86160;86161;86162;86163;86164;86165;86166;86167 86150 23 ELISNASDALDKIR Unmodified 1543.8206 0.82058566 862;1002 P08238;P14625 HSP90AB1;HSP90B1 Heat shock protein HSP 90-beta;Endoplasmin no no 0 0 1 By MS/MS 10 0 1 1 71.418 71.82 3 0.0063005 82088 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.805 52.401 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12729 862;1002 11618 107787 86168 86168 1 ELISNASDALEK Unmodified 1288.6511 0.65106071 2210 Q12931 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 2 54.158 54.002 2 1.0555E-08 62062 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 128.88 84.503 128750000 0 0 0 16244000 28637000 0 30633000 29821000 23410000 0 0 0 0 0 0 12730 2210 11619 107788;107789;107790;107791;107792;107793;107794 86169;86170;86171;86172;86173;86174;86175;86176 86174 6 ELISNSSDALDK Unmodified 1290.6303 0.63032527 850 P07900;Q14568 HSP90AA1;HSP90AA2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 44.209 43.133 2 2.5772E-67 48430 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 197.06 137.82 8829200000 13558000 308910000 0 414990000 262620000 944580000 420400000 449620000 303580000 656520000 1127800000 894080000 644120000 700210000 1688200000 12731 850 11620 107795;107796;107797;107798;107799;107800;107801;107802;107803;107804;107805;107806;107807;107808;107809 86177;86178;86179;86180;86181;86182;86183;86184;86185;86186;86187;86188;86189;86190;86191;86192;86193;86194;86195;86196;86197 86192 21 ELITILEK Unmodified 957.57465 0.57464829 2457 Q14974 KPNB1 Importin subunit beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 78.578 78.186 2 0.0019008 121683 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 167.9 79.872 104340000 0 14699000 0 3655700 0 6883200 5405600 0 4508200 9084000 12146000 12026000 0 10388000 25545000 12732 2457 11621 107810;107811;107812;107813;107814;107815;107816;107817;107818;107819 86198;86199;86200;86201;86202 86199 5 ELITLAK Unmodified 786.48511 0.485105 936 P11172 UMPS Uridine 5'-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5'-phosphate decarboxylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 51.034 51.187 2 0.028147 56448 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.847 7.4143 134240000 0 0 0 0 10386000 27508000 14322000 14378000 11111000 21416000 12666000 0 0 0 22455000 12733 936 11622 107820;107821;107822;107823;107824;107825;107826;107827 86203;86204;86205;86206;86207 86205 5 ELKSLDQAINDK Unmodified 1372.7198 0.71980898 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 16.88 16.906 3 0.0065912 17209 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 47.288 6.0046 13075000 0 0 0 2131400 0 3076100 3231000 1657900 0 2978900 0 0 0 0 0 12734 5071 11623 107828;107829;107830;107831;107832 86208;86209;86210;86211 86208 3 ELLAALQK Unmodified 884.53312 0.53311783 3249 Q8IWX8 CHERP Calcium homeostasis endoplasmic reticulum protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 57.392 57.509 2 0.0092148 65653 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 83.614 32.648 152810000 0 0 0 8756100 11892000 13628000 11351000 12705000 0 14825000 10926000 18267000 14169000 11956000 24336000 12735 3249 11624 107833;107834;107835;107836;107837;107838;107839;107840;107841;107842;107843 86212;86213;86214;86215;86216;86217;86218;86219 86213 8 ELLADQNLK Unmodified 1042.5659 0.56587452 2432 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 43.536 44.055 2 0.011907 48293 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.107 10.772 40468000 0 0 0 0 0 0 5211600 0 0 0 0 19518000 0 0 15738000 12736 2432 11625 107844;107845;107846 86220;86221 86221 2 ELLAFQTSEK Unmodified 1164.6027 0.60265396 3701;164 O00507;Q93008 USP9Y;USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-Y;Probable ubiquitin carboxyl-terminal hydrolase FAF-X no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 3 9 1 1 1 1 1 1 1 1 1 1 1 1 62.596 61.288 2 0.00027648 69722 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 140.14 74.893 375350000 11627000 227660000 5569400 0 0 18036000 10628000 0 8923000 13933000 17280000 15841000 12958000 16471000 16419000 12737 164;3701 11626 107847;107848;107849;107850;107851;107852;107853;107854;107855;107856;107857;107858 86222;86223;86224;86225;86226;86227;86228;86229;86230;86231;86232;86233 86229 11 ELLALDSVDPEGR Unmodified 1412.7147 0.7147236 694 O95817 BAG3 BAG family molecular chaperone regulator 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.714 77.771 2 2.844E-75 89776 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 194.54 170.51 345050000 0 0 0 17223000 16610000 19874000 22251000 23559000 18413000 31027000 30255000 54405000 17840000 31568000 62029000 12738 694 11627 107859;107860;107861;107862;107863;107864;107865;107866;107867;107868;107869;107870 86234;86235;86236;86237;86238;86239;86240;86241;86242;86243;86244;86245;86246;86247 86242 14 ELLALEK Unmodified 814.48002 0.48001963 3666 Q92817 EVPL Envoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 46.041 46.108 2 0.017052 52688 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 114.72 3.6854 590020000 0 0 0 57268000 52532000 76393000 67310000 0 56389000 85577000 95639000 98915000 0 0 0 12739 3666 11628 107871;107872;107873;107874;107875;107876;107877;107878 86248;86249;86250 86250 3 ELLALQNDPPPGMTLNEK Unmodified 1979.0034 0.0033774035 3747 Q96B02 UBE2W Ubiquitin-conjugating enzyme E2 W yes yes 0 0 0 By MS/MS 2.5 0.5 2 2 4 83.953 79.956 2;3 1.6447E-07 99355 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.745 79.377 73395000 0 73395000 0 0 0 0 0 0 0 0 0 0 0 0 0 12740 3747 11629 107879;107880;107881;107882 86251;86252;86253 86252 2 ELLAVPDNYK Unmodified 1160.6077 0.60773933 5261 Q9Y617 PSAT1 Phosphoserine aminotransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 65.538 65.61 2 0.0013888 74589 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 106.94 90.164 92263000 0 0 0 2840600 0 3509900 0 0 0 0 18858000 0 0 15020000 52034000 12741 5261 11630 107883;107884;107885;107886;107887 86254;86255 86254 1 ELLAWDPPQELQADAAR Unmodified 1921.9534 0.95339074 904 P0CW18 PRSS56 Serine protease 56 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 85.11 85.25 2 3.832E-07 98500 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.64 72.79 30181000 0 0 0 0 0 3441400 0 4535200 0 3212900 4921100 5193700 0 0 8876600 12742 904 11631 107888;107889;107890;107891;107892;107893;107894 86256;86257;86258;86259;86260;86261;86262 86258 7 ELLDTELDLHK Unmodified 1324.6874 0.68744622 4822 Q9P2N5 RBM27 RNA-binding protein 27 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 68.033 67.493 3 0.001513 88850 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.927 69.171 129110000 15690000 0 0 0 5195800 9115100 5958900 6753100 7829100 9100200 12475000 15396000 8751600 9854900 22988000 12743 4822 11632 107895;107896;107897;107898;107899;107900;107901;107902;107903;107904;107905;107906 86263;86264;86265;86266;86267;86268;86269;86270;86271;86272 86267 10 ELLDTELDLYK Unmodified 1350.6919 0.69186289 2786 Q5T8P6 RBM26 RNA-binding protein 26 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 82.326 81.678 2 2.9629E-23 94266 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 171.36 132.04 404530000 0 213410000 3598000 3293800 12467000 14311000 9788200 11064000 19077000 19998000 20258000 21412000 9704000 15453000 30694000 12744 2786 11633 107907;107908;107909;107910;107911;107912;107913;107914;107915;107916;107917;107918;107919;107920;107921 86273;86274;86275;86276;86277;86278;86279;86280;86281;86282;86283;86284;86285;86286;86287;86288 86279 15 ELLDTELDLYKK Unmodified 1478.7868 0.78682591 2786 Q5T8P6 RBM26 RNA-binding protein 26 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.222 75.281 3 0.0011405 86382 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.802 50.018 51910000 0 0 0 2080500 3615700 4248200 2775400 4555000 3976600 4991000 3529500 7642200 2723700 3716200 8056000 12745 2786 11634 107922;107923;107924;107925;107926;107927;107928;107929;107930;107931;107932;107933 86289;86290;86291;86292;86293;86294 86290 6 ELLDTVNNVFK Unmodified 1290.682 0.68196691 4165 Q9BUL8 PDCD10 Programmed cell death protein 10 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 81.937 81.286 2 1.9405E-05 93333 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 126.41 84.303 725380000 0 530860000 6679600 4584600 7928400 26183000 7904700 16249000 12784000 35535000 28344000 18043000 10713000 14511000 5059800 12746 4165 11635 107934;107935;107936;107937;107938;107939;107940;107941;107942;107943;107944;107945;107946;107947;107948 86295;86296;86297;86298;86299;86300;86301;86302;86303;86304;86305;86306;86307 86303 13 ELLDTVNNVFKK Unmodified 1418.7769 0.77692993 4165 Q9BUL8 PDCD10 Programmed cell death protein 10 yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 76.77 76.051 3 0.0017825 88006 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 48.944 32.412 65155000 9723300 0 0 0 1302400 4888800 3412300 5962700 0 6246200 5329000 6214100 0 4350300 17725000 12747 4165 11636 107949;107950;107951;107952;107953;107954;107955;107956;107957;107958 86308;86309;86310;86311;86312 86308 5 ELLEAVDAR Unmodified 1014.5346 0.53457439 1253 P29590 PML Protein PML yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.682 51.831 2 0.013982 58769 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 58.981 7.6349 109170000 0 0 0 4868400 6182800 6322200 7076300 8564200 4111200 10204000 10516000 16687000 11432000 10926000 12275000 12748 1253 11637 107959;107960;107961;107962;107963;107964;107965;107966;107967;107968;107969;107970 86313;86314;86315;86316 86313 4 ELLEIVK Unmodified 842.51132 0.51131975 1297 P31153 MAT2A S-adenosylmethionine synthase isoform type-2 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 64.548 64.78 2 0.023412 74193 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 86.512 18.114 46799000 0 0 0 0 0 3867300 0 0 3311500 4185500 0 9866800 3814400 6556900 15197000 12749 1297 11638 107971;107972;107973;107974;107975;107976;107977 86317;86318;86319;86320;86321 86318 5 ELLELASR Unmodified 929.5182 0.51819605 2033 Q00341 HDLBP Vigilin yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 58.067 58.24 2 0.019504 66309 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 63.565 12.599 77014000 0 0 0 3954900 0 5088800 3433400 4533900 3569300 7422100 7365000 17609000 7210800 4819700 12007000 12750 2033 11639 107978;107979;107980;107981;107982;107983;107984;107985;107986;107987;107988 86322;86323 86322 1 ELLELEALSMAVESTGTAK Unmodified 1991.0133 0.013273388 2444 Q14764 MVP Major vault protein yes yes 0 0 0 By MS/MS 2 0 1 1 99.15 91.02 3 0.00066475 117414 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.528 39.363 20362000 20362000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12751 2444 11640 107989 86324 86324 0 ELLEQNPGK Unmodified 1026.5346 0.53457439 2686 Q4KMP7 TBC1D10B TBC1 domain family member 10B yes yes 0 0 0 By MS/MS 2 0 1 1 30.268 25.875 2 0.037197 33893 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.464 32.389 13214000 0 13214000 0 0 0 0 0 0 0 0 0 0 0 0 0 12752 2686 11641 107990 86325 86325 1 ELLEQQGIDIK Unmodified 1284.6925 0.6925316 378 O43896 KIF1C Kinesin-like protein KIF1C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 65.405 65.488 2 4.1749E-05 74929 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 136.57 65.065 80780000 0 0 0 0 7175000 11430000 6435500 8151000 8945500 11857000 9980600 0 8060600 8744600 0 12753 378 11642 107991;107992;107993;107994;107995;107996;107997;107998;107999;108000;108001;108002 86326;86327;86328;86329;86330;86331;86332;86333;86334;86335;86336;86337 86331 11 ELLEQQTCVLR Unmodified 1387.7129 0.71294946 3666 Q92817 EVPL Envoplakin yes yes 0 0 0 By MS/MS 10 0 1 1 61.696 61.005 2 0.035671 70451 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 66.299 36.632 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12754 3666 11643 108003 86338 86338 1 ELLESLPLSK Unmodified 1127.6438 0.64379049 2226 Q13042 CDC16 Cell division cycle protein 16 homolog yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 78.115 76.989 2 0.00061836 95516 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.05 37.727 786520000 10341000 444740000 8388900 14751000 17765000 25401000 21527000 15487000 17136000 32889000 35484000 31034000 29997000 30529000 51046000 12755 2226 11644 108004;108005;108006;108007;108008;108009;108010;108011;108012;108013;108014;108015;108016;108017;108018;108019 86339;86340;86341;86342;86343;86344;86345;86346;86347;86348;86349;86350;86351;86352;86353 86342 15 ELLEVIGK Unmodified 899.53278 0.53278348 3221 Q8IV38 ANKMY2 Ankyrin repeat and MYND domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 1 1 1 1 1 1 1 1 1 1 1 1 1 67.646 66.948 2 0.015415 76775 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 68.915 19.556 162490000 246490 109080000 0 2894600 0 5979300 3352500 2782200 2459200 6188100 5456700 5482300 4233800 5044900 9293400 12756 3221 11645 108020;108021;108022;108023;108024;108025;108026;108027;108028;108029;108030;108031;108032 86354;86355;86356;86357;86358;86359;86360;86361;86362;86363;86364;86365;86366;86367 86354 14 ELLEYDLQQR Unmodified 1305.6565 0.65648044 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 65.315 65.312 2 0.0015804 74819 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 103.56 65.836 55123000 0 0 0 4025900 4100100 7161400 5381100 4837200 3172100 8673200 0 10942000 6829800 0 0 12757 2775 11646 108033;108034;108035;108036;108037;108038;108039;108040;108041 86368;86369;86370;86371;86372;86373;86374;86375 86368 8 ELLEYDLQQREAATK Unmodified 1805.9159 0.9159426 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 65.92 60.245 3 2.7514E-10 80255 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 92.265 75.519 85248000 9386400 49746000 26115000 0 0 0 0 0 0 0 0 0 0 0 0 12758 2775 11647 108042;108043;108044;108045 86376;86377;86378;86379;86380 86378 5 ELLFLSNANPSLLER Unmodified 1714.9254 0.92538508 1652 P51398 DAP3 28S ribosomal protein S29, mitochondrial yes yes 0 0 0 By MS/MS 10 0 1 1 90.924 91.062 2 0.00010208 105443 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.937 66.551 2467500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2467500 12759 1652 11648 108046 86381;86382 86381 2 ELLGPPEAK Unmodified 952.52295 0.52294707 2449 Q14807 KIF22 Kinesin-like protein KIF22 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 43.516 43.756 2 0.019448 48285 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 53.968 21.854 107810000 0 0 0 0 8117600 7608400 9304900 8644700 9502500 9252800 12844000 13558000 10605000 7185200 11188000 12760 2449 11649 108047;108048;108049;108050;108051;108052;108053;108054;108055;108056;108057 86383;86384;86385 86385 3 ELLGQGIDYEK Unmodified 1263.6347 0.63468237 4320 Q9H0A8 COMMD4 COMM domain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 61.155 59.816 2 0.00028854 68746 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 103.7 73.13 329670000 7793400 227290000 2770400 3489400 3706200 6980700 4718800 9001000 4040600 9602900 8574400 8384200 7950100 9302500 16072000 12761 4320 11650 108058;108059;108060;108061;108062;108063;108064;108065;108066;108067;108068;108069;108070;108071;108072;108073 86386;86387;86388;86389;86390;86391;86392;86393;86394;86395;86396;86397 86396 11 ELLGQGLLLR Unmodified 1110.6761 0.67609367 4033 Q99613;B5ME19 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 83.306 83.369 2 0.00049838 95476 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 124.83 64.047 316150000 0 0 0 6087000 7274400 17406000 8482400 13216000 23473000 35824000 37223000 36215000 26856000 27807000 76289000 12762 4033 11651 108074;108075;108076;108077;108078;108079;108080;108081;108082;108083;108084;108085 86398;86399;86400;86401;86402;86403;86404;86405;86406;86407 86405 10 ELLHSQNTWLNTELK Unmodified 1824.937 0.9370124 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.09 3.85 4 7 2 1 1 1 1 1 1 1 1 1 77.267 75.216 2;3 7.0371E-13 96831 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 152 123.05 277210000 133240000 80314000 5467600 0 0 4355500 0 5605100 0 5082600 4685300 0 3025500 4283700 31152000 12763 965 11652 108086;108087;108088;108089;108090;108091;108092;108093;108094;108095;108096 86408;86409;86410;86411;86412;86413 86411 5 ELLIFNK Unmodified 875.51165 0.5116541 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 72.316 71.925 2 0.023175 82362 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 102.81 21.706 629160000 0 126400000 0 0 29296000 58859000 57770000 40562000 38026000 67576000 69697000 80111000 60864000 0 0 12764 894 11653 108097;108098;108099;108100;108101;108102;108103;108104;108105;108106 86414;86415;86416;86417;86418;86419 86417 6 ELLIHER Unmodified 908.50797 0.50796571 3761 Q96BN8 OTULIN Ubiquitin thioesterase otulin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 6 1 1 1 1 1 1 30.441 30.629 2 0.04393 32004 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 67.032 8.0509 42397000 0 0 0 4328600 0 0 0 4224600 3132800 9664700 0 0 0 6023300 15023000 12765 3761 11654 108107;108108;108109;108110;108111;108112 86420 86420 1 ELLLAEK Unmodified 814.48002 0.48001963 1522 P47712 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.57 3.96 3 4 1 1 1 1 1 1 1 48.077 45.759 2 0.021069 50640 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 107.32 6.5753 934900000 38692000 543050000 22021000 0 0 0 0 67551000 0 0 0 0 92194000 75408000 95988000 12766 1522 11655 108113;108114;108115;108116;108117;108118;108119 86421;86422;86423;86424;86425 86424 5 ELLLGLLELIEEPSGK Unmodified 1751.9921 0.99206766 3696 Q92990 GLMN Glomulin yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 2 2 2 2 103.58 98.552 2 4.6808E-16 123183 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 149.23 134.99 43866000 40138000 3727900 0 0 0 0 0 0 0 0 0 0 0 0 0 12767 3696 11656 108120;108121;108122;108123 86426;86427;86428 86428 3 ELLLLPGQPQTPVFPSTHDPR Unmodified 2341.243 0.24303082 5057 Q9UPS6 SETD1B Histone-lysine N-methyltransferase SETD1B yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 86.353 86.534 3 0.029494 100035 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 22.24 13.182 8328900 0 0 0 0 0 0 0 0 0 0 1951200 0 0 0 6377700 12768 5057 11657 108124;108125 86429 86429 1 ELLLPDTER Unmodified 1084.5764 0.57643921 3522 Q8TEX9 IPO4 Importin-4 yes yes 0 0 0 By MS/MS 10 0 1 1 62.671 61.977 2 0.0085067 71496 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 69.423 49.787 9954900 0 0 0 9954900 0 0 0 0 0 0 0 0 0 0 0 12769 3522 11658 108126 86430;86431 86431 2 ELLLPQDAGGPTSLGGGAGGPLLAER Unmodified 2445.2864 0.2863522 3801 Q96DT7 ZBTB10 Zinc finger and BTB domain-containing protein 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 88.148 88.196 3 3.1523E-10 102082 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.705 46.906 39027000 0 0 0 0 2731300 3756300 0 0 0 10306000 0 0 2142300 4696100 15395000 12770 3801 11659 108127;108128;108129;108130;108131;108132 86432;86433;86434;86435;86436;86437;86438 86435 7 ELLLQPVTISR Unmodified 1267.75 0.7499869 1806 P59998 ARPC4 Actin-related protein 2/3 complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.583 79.641 2 1.0396E-05 91996 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 138.66 109.5 390950000 0 0 0 31284000 22590000 26565000 19809000 20692000 16448000 30086000 42564000 49078000 20857000 34069000 76904000 12771 1806 11660 108133;108134;108135;108136;108137;108138;108139;108140;108141;108142;108143;108144 86439;86440;86441;86442;86443;86444;86445;86446;86447;86448;86449;86450;86451 86440 13 ELLLQPVTISRNEK Unmodified 1638.9305 0.93047046 1806 P59998 ARPC4 Actin-related protein 2/3 complex subunit 4 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 77.32 71.831 2;3 0.0035074 88326 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 58.574 38.996 59436000 30190000 0 29245000 0 0 0 0 0 0 0 0 0 0 0 0 12772 1806 11661 108145;108146 86452;86453 86453 1 ELLLSAIDSVNATSK Unmodified 1559.8407 0.8406524 1497 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes yes 0 0 0 By MS/MS 2 0 1 1 88.775 83.933 2 3.8492E-40 104330 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145.09 74.985 22119000 0 22119000 0 0 0 0 0 0 0 0 0 0 0 0 0 12773 1497 11662 108147 86454 86454 1 ELLLSGPPEVAAPDTPYLHVDSAAQR Unmodified 2745.3974 0.39735921 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 0 0 By MS/MS 10 0 1 1 85.753 85.921 3 4.1757E-28 99303 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.365 74.421 8452100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8452100 12774 645 11663 108148 86455 86455 1 ELLLTGPGLEER Unmodified 1325.7191 0.7190807 3314 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 75.773 75.821 2 0.00011669 87388 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 87.485 27.685 195640000 0 0 0 8167600 11769000 23744000 15312000 0 10114000 23289000 19321000 29076000 0 16523000 38323000 12775 3314 11664 108149;108150;108151;108152;108153;108154;108155;108156;108157;108158 86456;86457;86458;86459;86460;86461;86462;86463;86464;86465;86466 86464 11 ELLLYPCGQQDQLPDYLELFE Unmodified 2582.2251 0.22505708 4430 Q9H788 SH2D4A SH2 domain-containing protein 4A yes yes 0 0 0 By MS/MS 2 0 1 1 102.21 94.084 3 0.0062715 121018 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 31.138 27.982 21519000 21519000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12776 4430 11665 108159 86467 86467 1 ELLNETEEEINK Unmodified 1459.7042 0.70421849 214 O14777 NDC80 Kinetochore protein NDC80 homolog yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 58.656 53.316 2 3.1286E-14 68301 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 139.38 88.189 153020000 0 153020000 0 0 0 0 0 0 0 0 0 0 0 0 0 12777 214 11666 108160;108161 86468;86469 86468 2 ELLNLAENNK Unmodified 1156.6088 0.60880197 2922 Q6P1N9 TATDN1 Putative deoxyribonuclease TATDN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 3.8 3.12 3 1 1 2 2 1 57.611 54.271 2 4.0179E-05 69615 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 159.58 100.6 206010000 0 198920000 0 0 0 0 0 0 0 0 0 0 0 0 7086100 12778 2922 11667 108162;108163;108164;108165;108166 86470;86471;86472;86473;86474;86475 86470 5 ELLNPVVEFVSHPSTTCR Unmodified 2084.0361 0.036074515 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 2 85.677 85.816 2;3 5.6486E-11 99503 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 84.14 80.033 63655000 0 0 0 0 0 2405400 0 0 2756900 5008700 3819000 6316100 0 6364700 36984000 12779 1986 11668 108167;108168;108169;108170;108171;108172;108173;108174 86476;86477;86478;86479;86480;86481;86482;86483;86484;86485 86482 10 ELLNVTPEDWDFCCK Unmodified 1924.8335 0.83353488 2797 Q5TFE4 NT5DC1 5'-nucleotidase domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 90.56 85.886 2 7.7382E-40 107623 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 143.22 138.5 89198000 7441500 79733000 2023500 0 0 0 0 0 0 0 0 0 0 0 0 12780 2797 11669 108175;108176;108177;108178 86486;86487;86488;86489 86486 4 ELLPEIR Unmodified 868.50182 0.5018177 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 65.527 65.474 2 0.023527 75605 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 92.467 15.62 209860000 0 0 0 20704000 15816000 20925000 25234000 23166000 16543000 33547000 0 0 0 53926000 0 12781 1564 11670 108179;108180;108181;108182;108183;108184;108185;108186 86490;86491 86491 2 ELLPNGLRESISK Unmodified 1454.8093 0.80929269 3946 Q96P70 IPO9 Importin-9 yes yes 0 0 1 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 64.717 64.844 3 0.011866 74191 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 32.43 4.3769 42442000 0 0 0 0 1157800 6980700 2119400 2345800 0 5677000 4561200 0 4645300 3996800 10958000 12782 3946 11671 108187;108188;108189;108190;108191;108192;108193;108194;108195 86492 86492 1 ELLPSVR Unmodified 812.4756 0.47560295 4114 Q9BRQ8 AIFM2 Apoptosis-inducing factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 51.456 51.537 2 0.023412 57396 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 86.512 37.752 112520000 0 0 0 8707800 10696000 0 9945000 12844000 8803800 14152000 19013000 19826000 0 8530400 0 12783 4114 11672 108196;108197;108198;108199;108200;108201;108202;108203;108204 86493 86493 1 ELLPVLISAMK Unmodified 1212.7152 0.71518129 1073 P18206 VCL Vinculin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.4 3.68 4 1 10 1 3 1 1 1 2 1 1 1 1 1 1 94.397 92.932 2 0.00034474 107889 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.496 88.496 394440000 177150000 181850000 5482700 0 0 1589300 0 1319500 1138700 3470700 2493400 2387400 709260 2139900 14712000 12784 1073 11673 108205;108206;108207;108208;108209;108210;108211;108212;108213;108214;108215;108216;108217;108218;108219 86494;86495;86496;86497;86498;86499;86500;86501;86502;86503;86504;86505;86506 86500 12 ELLPVLISAMK Oxidation (M) 1228.7101 0.71009592 1073 P18206 VCL Vinculin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 86.021 84.613 2 0.0040591 107289 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.489 67.248 451360000 83912000 178050000 22834000 8100400 7443600 27769000 11842000 8934000 8881200 23530000 0 0 0 22034000 48026000 12785 1073 11673 108220;108221;108222;108223;108224;108225;108226;108227;108228;108229;108230;108231;108232 86507;86508;86509;86510;86511;86512 86511 1530 6 ELLQEQLEQLQR Unmodified 1525.81 0.81002097 5288 Q9Y6K9 IKBKG NF-kappa-B essential modulator yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 77.503 77.669 2 1.6288E-06 89266 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 114.86 66.435 36398000 0 0 0 0 0 0 2565600 0 0 5328300 0 6108700 0 6530300 15865000 12786 5288 11674 108233;108234;108235;108236;108237;108238 86513;86514;86515;86516;86517;86518 86515 6 ELLQESALIRK Unmodified 1298.7558 0.75580056 2210 Q12931 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 58.07 58.146 3 0.00085947 65144 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.806 46.699 95936000 0 0 0 3851600 6149600 13515000 5981900 11686000 5201700 10668000 9364500 0 10771000 6319300 12428000 12787 2210 11675 108239;108240;108241;108242;108243;108244;108245;108246;108247;108248;108249 86519;86520;86521;86522;86523;86524;86525;86526;86527;86528;86529;86530 86523 11 ELLQHPFLK Unmodified 1123.639 0.63897988 2248 Q13177;O75914 PAK2;PAK3 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34;Serine/threonine-protein kinase PAK 3 yes no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 61.857 60.651 2 0.0051291 66813 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.716 54.498 72651000 16597000 14566000 0 0 0 5782400 2383300 1580100 3094500 0 0 6623800 3251200 4283600 14489000 12788 2248 11676 108250;108251;108252;108253;108254;108255;108256;108257;108258;108259 86531;86532;86533;86534;86535;86536 86533 6 ELLQSFDSALQSVK Unmodified 1563.8144 0.81443765 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 86.608 86.735 2 1.6527E-16 100281 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 145.55 119.51 16805000 0 0 0 0 0 1588400 0 0 2333000 4416900 0 0 0 0 8466700 12789 1601 11677 108260;108261;108262;108263;108264;108265 86537;86538;86539;86540;86541 86539 5 ELLRIPQAALAK Unmodified 1321.8082 0.80817048 3133 Q86TB9 PATL1 Protein PAT1 homolog 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.488 72.557 3 1.8811E-05 83572 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 83.081 75.17 148050000 0 0 0 3831600 4770600 18869000 10349000 12807000 11121000 13448000 11875000 24426000 13823000 11405000 11325000 12790 3133 11678 108266;108267;108268;108269;108270;108271;108272;108273;108274;108275;108276;108277 86542;86543;86544;86545;86546;86547;86548;86549;86550;86551;86552;86553 86542 12 ELLSAEENK Unmodified 1031.5135 0.5135046 4697 Q9NWH9 SLTM SAFB-like transcription modulator yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 2 1 27.354 27.207 2 0.00081622 34077 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145.34 48.271 120540000 0 62377000 0 5334400 0 0 0 5395000 0 7159600 7293600 7155000 7841800 9686500 8301200 12791 4697 11679 108278;108279;108280;108281;108282;108283;108284;108285;108286;108287 86554;86555;86556;86557;86558 86555 4 ELLSGPNR Unmodified 884.47158 0.4715802 1380 P36871 PGM1 Phosphoglucomutase-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 28.488 28.772 2 0.0083611 30145 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.472 43.472 210230000 0 0 0 7196600 0 5302400 0 8146900 0 9422500 32664000 35907000 5955500 22235000 83402000 12792 1380 11680 108288;108289;108290;108291;108292;108293;108294;108295;108296 86559;86560;86561;86562;86563;86564;86565 86561 5 ELLSGPNRLK Unmodified 1125.6506 0.6506072 1380 P36871 PGM1 Phosphoglucomutase-1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 46.343 39.943 2 3.0063E-06 54721 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 152.63 114.39 118320000 95634000 22685000 0 0 0 0 0 0 0 0 0 0 0 0 0 12793 1380 11681 108297;108298 86566;86567 86567 2 ELLSMHHQPDPALTK Oxidation (M) 1731.8614 0.86140461 5061 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 0 1 0 By MS/MS 2 0 1 1 48.969 41.144 3 0.0021911 56931 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.09 48.375 37931000 37931000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12794 5061 11682 108299 86568;86569 86569 6414 2 ELLSNVDEGIYQLEK Unmodified 1748.8832 0.88324549 3693 Q92974 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.06 2.49 1 1 14 2 1 1 1 1 2 2 2 1 1 2 84.157 83.78 2;3 1.0054E-166 103618 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 243.85 225.74 289720000 0 148420000 0 0 0 6017100 4090700 8759500 7553000 31754000 18791000 15648000 3286300 8804000 36595000 12795 3693 11683 108300;108301;108302;108303;108304;108305;108306;108307;108308;108309;108310;108311;108312;108313;108314;108315 86570;86571;86572;86573;86574;86575;86576;86577;86578;86579;86580;86581;86582;86583 86574 14 ELLSPGVK Unmodified 841.49092 0.49091866 2439 Q14694 USP10 Ubiquitin carboxyl-terminal hydrolase 10 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 43.431 38.848 2 0.01674 50241 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.626 24.592 230380000 0 225170000 5206200 0 0 0 0 0 0 0 0 0 0 0 0 12796 2439 11684 108316;108317;108318 86584;86585 86584 2 ELLSQLEETR Unmodified 1216.6299 0.62993134 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 65.495 65.691 2 0.0015079 74313 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 90.629 40.503 24656000 0 0 0 0 0 0 2762500 0 0 6843500 7808900 0 0 7241500 0 12797 2446 11685 108319;108320;108321;108322 86586;86587;86588 86588 3 ELLTAGSDGR Unmodified 1017.5091 0.50908792 3348 Q8N5I9 C12orf45 Uncharacterized protein C12orf45 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 29.028 29.088 2 0.0044278 31471 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 72.879 18.103 451980000 0 0 0 39019000 59763000 0 49770000 39648000 49071000 73757000 0 0 70203000 70753000 0 12798 3348 11686 108323;108324;108325;108326;108327;108328;108329;108330;108331;108332 86589;86590;86591;86592;86593;86594;86595;86596;86597;86598 86597 10 ELLTEFGYK Unmodified 1098.5597 0.55972651 1572 P49411 TUFM Elongation factor Tu, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 73.508 73.589 2 0.015842 84835 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 57.047 28.941 25318000 0 0 0 0 0 11029000 0 0 0 7196300 0 0 0 7092600 0 12799 1572 11687 108333;108334;108335 86599;86600;86601;86602 86599 4 ELLTENHQLK Unmodified 1223.651 0.65100113 3785 Q96CV9 OPTN Optineurin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 40.876 35.763 3 0.011801 46261 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 44.425 27.058 241520000 38291000 159320000 43904000 0 0 0 0 0 0 0 0 0 0 0 0 12800 3785 11688 108336;108337;108338 86603 86603 1 ELLTLDEK Unmodified 959.51753 0.51752734 1511 P46781 RPS9 40S ribosomal protein S9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 53.825 54.158 2 0.016961 61197 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 66.429 0.6261 1087700000 0 0 0 0 0 123550000 0 0 0 152240000 0 232490000 202520000 165840000 211110000 12801 1511 11689 108339;108340;108341;108342;108343;108344 86604;86605;86606;86607;86608 86607 4 ELLTLDEKDPR Unmodified 1327.6983 0.69834526 1511 P46781 RPS9 40S ribosomal protein S9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 1 2 2 1 1 2 2 2 2 2 50.963 51.117 2;3 0.00075426 56925 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 118.71 79.749 971680000 0 0 0 71921000 81054000 23918000 78443000 66893000 30206000 60077000 102650000 150520000 110650000 91502000 103840000 12802 1511 11690 108345;108346;108347;108348;108349;108350;108351;108352;108353;108354;108355;108356;108357;108358;108359;108360;108361;108362;108363;108364;108365 86609;86610;86611;86612;86613;86614;86615;86616;86617;86618;86619 86617 11 ELLTLIR Unmodified 856.5382 0.53820321 2494 Q15067 ACOX1 Peroxisomal acyl-coenzyme A oxidase 1 yes yes 0 0 0 By MS/MS 10 0 1 1 76.346 75.851 2 0.033465 87941 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 71.949 6.6865 8344800 0 0 0 8344800 0 0 0 0 0 0 0 0 0 0 0 12803 2494 11691 108366 86620 86620 1 ELLTRELPSFLGK Unmodified 1501.8504 0.85042922 1206 P26447 S100A4 Protein S100-A4 yes yes 0 0 1 By MS/MS By MS/MS 2.4 0.49 3 2 3 2 88.759 83.171 2;3 0.0020394 106068 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.716 57.089 290640000 156240000 134400000 0 0 0 0 0 0 0 0 0 0 0 0 0 12804 1206 11692 108367;108368;108369;108370;108371 86621;86622;86623;86624;86625 86623 5 ELLTSFGPLK Unmodified 1103.6227 0.62266112 1202 P26368 U2AF2 Splicing factor U2AF 65 kDa subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.9 3.81 6 2 12 3 3 2 1 1 1 1 1 1 1 1 1 1 1 1 81.825 80.691 2 9.1686E-06 96772 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 140.5 102.94 3101300000 100420000 807690000 106260000 108890000 147100000 186550000 171120000 142820000 180460000 255410000 187170000 0 191510000 204010000 311920000 12805 1202 11693 108372;108373;108374;108375;108376;108377;108378;108379;108380;108381;108382;108383;108384;108385;108386;108387;108388;108389;108390;108391 86626;86627;86628;86629;86630;86631;86632;86633;86634;86635;86636;86637;86638;86639;86640;86641;86642;86643;86644;86645;86646;86647;86648 86635 23 ELLTTMGDR Unmodified 1034.5066 0.50664508 229 P19105;O14950;P24844 MYL12A;MYL12B;MYL9 Myosin regulatory light chain 12A;Myosin regulatory light chain 12B;Myosin regulatory light polypeptide 9 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.66 46.826 2 0.0071283 53248 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 73.248 35.01 360650000 0 0 0 23493000 20486000 39399000 27616000 22254000 18309000 25241000 31936000 47292000 27140000 23993000 53490000 12806 229 11694 108392;108393;108394;108395;108396;108397;108398;108399;108400;108401;108402;108403 86649;86650;86651;86652;86653;86654;86655;86656;86657;86658 86657 8 ELLTTMGDR Oxidation (M) 1050.5016 0.5015597 229 P19105;O14950;P24844 MYL12A;MYL12B;MYL9 Myosin regulatory light chain 12A;Myosin regulatory light chain 12B;Myosin regulatory light polypeptide 9 yes no 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 28.915 29.172 2 0.011606 31295 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 55.531 30.532 123310000 0 0 0 8802600 0 18775000 18266000 0 12725000 8361000 15798000 12303000 9520400 7953100 10810000 12807 229 11694 108404;108405;108406;108407;108408;108409;108410;108411;108412;108413 86659;86660;86661;86662;86663;86664;86665;86666 86664 304 8 ELLTVENQK Unmodified 1072.5764 0.57643921 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 38.642 38.167 2 0.0051376 42362 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 82.452 39.854 584770000 0 451900000 0 12763000 10824000 20747000 13025000 14419000 11230000 22383000 24143000 0 0 3337000 0 12808 1286 11695 108414;108415;108416;108417;108418;108419;108420;108421;108422;108423 86667;86668;86669;86670 86669 3 ELLVPLTSSMYVPGK Oxidation (M) 1648.8746 0.87459506 4013 Q99471 PFDN5 Prefoldin subunit 5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 83.31 82.645 2 6.1888E-06 95889 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 81.017 68.803 447190000 0 318200000 8639400 0 4342900 8249300 5778700 4845500 4961200 9457100 16370000 13695000 9328800 13855000 29462000 12809 4013 11696 108424;108425;108426;108427;108428;108429;108430;108431;108432;108433;108434;108435;108436;108437 86671;86672;86673;86674;86675;86676;86677;86678;86679;86680;86681;86682;86683;86684;86685;86686 86685 5509 16 ELLVPLTSSMYVPGK Unmodified 1632.8797 0.87968044 4013 Q99471 PFDN5 Prefoldin subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.21 3.75 4 1 9 1 3 1 1 1 1 1 1 1 1 1 1 89.609 87.985 2 0.00047713 109704 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.229 89.989 930510000 13188000 850250000 5950800 0 1839200 3250900 1753700 3146800 0 0 6317800 4676300 1777700 5645400 32708000 12810 4013 11696 108438;108439;108440;108441;108442;108443;108444;108445;108446;108447;108448;108449;108450;108451 86687;86688;86689;86690;86691;86692;86693;86694;86695;86696;86697;86698;86699 86689 12 ELLVSALQELESSTSNSPSNK Unmodified 2232.1121 0.11213581 3532 Q8WTW3 COG1 Conserved oligomeric Golgi complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 95.983 92.476 3 6.0797E-20 114461 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.73 98.026 33059000 0 32122000 936640 0 0 0 0 0 0 0 0 0 0 0 0 12811 3532 11697 108452;108453;108454 86700;86701;86702 86701 3 ELLWWWGMR Oxidation (M) 1291.6172 0.61719858 305 O43187 IRAK2 Interleukin-1 receptor-associated kinase-like 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 47.751 47.96 2 0.0095721 53526 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 58.167 23.995 98163000 0 0 0 6878200 0 21441000 0 9194500 5274000 0 0 13002000 0 0 42373000 12812 305 11698 108455;108456;108457;108458;108459;108460;108461 86703;86704;86705 86704 395 3 ELMCFDPDTDK Unmodified 1369.553 0.55300293 4824 Q9P2N7 KLHL13 Kelch-like protein 13 yes yes 0 0 0 By MS/MS 2 0 1 1 69.054 63.154 2 0.0015413 80516 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.913 80.346 22264000 0 22264000 0 0 0 0 0 0 0 0 0 0 0 0 0 12813 4824 11699 108462 86706;86707 86706 2 ELMCFDPDTDK Oxidation (M) 1385.5479 0.54791755 4824 Q9P2N7 KLHL13 Kelch-like protein 13 yes yes 0 1 0 By MS/MS 2 0 1 1 49.724 44.017 2 0.016668 57325 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.719 54.568 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12814 4824 11699 108463 86708 86708 6199 1 ELMCQIEASAK Unmodified 1278.5948 0.59480816 3242 Q8IWJ2 GCC2 GRIP and coiled-coil domain-containing protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 59.107 53.265 2 0.0018822 68675 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.62 99.82 47277000 0 47277000 0 0 0 0 0 0 0 0 0 0 0 0 0 12815 3242 11700 108464 86709 86709 0 ELMDEEDVLQECK Unmodified 1636.696 0.69603835 2727 Q5H9R7 PPP6R3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 67.622 66.527 2 4.9813E-15 82901 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.71 120.02 133190000 5481500 90105000 0 0 0 2681100 1387200 2762300 0 4249600 4202900 4053000 3106700 4514800 10642000 12816 2727 11701 108465;108466;108467;108468;108469;108470;108471;108472;108473;108474;108475 86710;86711;86712;86713;86714;86715;86716;86717;86718;86719 86712 10 ELMDEEDVLQECK Oxidation (M) 1652.691 0.69095297 2727 Q5H9R7 PPP6R3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 yes yes 0 1 0 By MS/MS 2 0 1 1 57.631 51.8 2 2.8245E-18 66859 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.82 116.85 8876700 0 8876700 0 0 0 0 0 0 0 0 0 0 0 0 0 12817 2727 11701 108476 86720 86720 4371 1 ELMELLK Unmodified 874.48339 0.48339044 4617 Q9NRZ9 HELLS Lymphoid-specific helicase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 72.765 72.929 2 0.031031 84209 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 74.191 29.66 37977000 0 0 0 0 0 4481000 0 4838200 0 5870100 7024400 0 3913800 4564200 7285100 12818 4617 11702 108477;108478;108479;108480;108481;108482;108483 86721;86722 86721 2 ELMERLK Unmodified 917.50044 0.50043749 3421 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 38.234 32.496 2 0.025306 45019 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 151.17 58.48 93954000 87286000 6668000 0 0 0 0 0 0 0 0 0 0 0 0 0 12819 3421 11703 108484;108485 86723 86723 0 ELMGEEILGASLSAPLTSYK Oxidation (M) 2124.066 0.06603724 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 2 2 92.354 88.116 2;3 7.8777E-128 110071 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 202.4 197.01 110030000 10630000 88120000 11282000 0 0 0 0 0 0 0 0 0 0 0 0 12820 4819 11704 108486;108487;108488;108489;108490 86724;86725;86726;86727;86728 86724 6183 4 ELMGEEILGASLSAPLTSYK Unmodified 2108.0711 0.071122618 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.12 0.331 7 1 1 5 2 97.171 92.735 2;3 0 114961 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 269.79 253.87 629020000 17677000 591150000 20196000 0 0 0 0 0 0 0 0 0 0 0 0 12821 4819 11704 108491;108492;108493;108494;108495;108496;108497;108498 86729;86730;86731;86732;86733;86734 86729 5 ELMGFSK Oxidation (M) 826.38949 0.38949006 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 1 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 26.831 27.057 2 0.037908 28861 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 56.122 13.056 80196000 0 0 0 5599300 0 11080000 8591800 0 7229500 10514000 0 13975000 11972000 0 11234000 12822 4634 11705 108499;108500;108501;108502;108503;108504;108505;108506 86735;86736 86735 2 ELMKLEQENMEKR Oxidation (M) 1692.8175 0.81749089 2770 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes yes 0 1 2 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 24.807 24.862 3 0.0039366 26294 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 60.49 19.875 48085000 0 0 0 0 0 12946000 21482000 13658000 0 0 0 0 0 0 0 12823 2770 11706 108507;108508;108509 86737;86738;86739 86738 4402 3 ELMLHAADVEALQAAK Oxidation (M) 1724.8767 0.87672033 965 P12270 TPR Nucleoprotein TPR yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 70.57 70.779 3 0.00066769 80670 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.177 42.462 31962000 0 0 0 0 0 0 0 0 0 11467000 0 0 4641300 5568900 10285000 12824 965 11707 108510;108511;108512;108513;108514 86740;86741;86742 86742 1263 3 ELMNLTGTIPVPYR Oxidation (M) 1618.8389 0.83887826 4063 Q99816 TSG101 Tumor susceptibility gene 101 protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.221 81.281 2 6.8936E-20 94041 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 138.22 123.07 64462000 0 0 0 1410500 3612300 3955100 3302000 4503300 2499500 10922000 6537400 7129100 6207600 4416100 9967300 12825 4063 11708 108515;108516;108517;108518;108519;108520;108521;108522;108523;108524;108525;108526 86743;86744;86745;86746;86747;86748;86749;86750;86751;86752;86753;86754;86755 86744 5560 13 ELMPPQAGMEK Oxidation (M) 1245.5733 0.57334444 3893 Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 yes yes 0 1 0 By MS/MS 2 0 1 1 41.052 36 2 0.013346 46873 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.463 37.54 8606900 0 8606900 0 0 0 0 0 0 0 0 0 0 0 0 0 12826 3893 11709 108527 86756 86756 5393 1 ELMQWYK Unmodified 996.47389 0.47388839 1709 P53041 PPP5C Serine/threonine-protein phosphatase 5 yes yes 0 0 0 By MS/MS 2 0 1 1 68.523 64.8 2 0.047411 80241 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 77.72 42.827 6611700 0 0 6611700 0 0 0 0 0 0 0 0 0 0 0 0 12827 1709 11710 108528 86757 86757 1 ELMRGEEGRPGK Oxidation (M) 1373.6721 0.67214728 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 1 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.6937 6.8173 3 0.00031334 4620 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 85.522 66.944 257740000 0 0 0 13390000 14160000 20056000 19801000 11066000 21549000 30460000 27046000 23423000 30750000 21920000 24124000 12828 2451 11711 108529;108530;108531;108532;108533;108534;108535;108536;108537;108538;108539;108540 86758;86759;86760;86761;86762;86763;86764;86765 86759 4018 8 ELMTEGEHIATEITAK Unmodified 1771.8662 0.86621522 2224 Q13017 ARHGAP5 Rho GTPase-activating protein 5 yes yes 0 0 0 By MS/MS 2 0 1 1 77.537 74.847 3 0.023508 91171 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 27.643 8.0655 2775600 0 0 2775600 0 0 0 0 0 0 0 0 0 0 0 0 12829 2224 11712 108541 86766 86766 1 ELNEDVSADVEER Unmodified 1503.6689 0.66889562 3518 Q8TEQ6 GEMIN5 Gem-associated protein 5 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 47.01 47.12 2 0.02382 53091 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 50.675 38.097 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12830 3518 11713 108542;108543 86767;86768 86767 2 ELNEFREK Unmodified 1063.5298 0.52982336 4910 Q9UHV9 PFDN2 Prefoldin subunit 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 26.335 22.701 2 0.035794 29237 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 179.21 91.181 122240000 0 13293000 108940000 0 0 0 0 0 0 0 0 0 0 0 0 12831 4910 11714 108544;108545 86769 86769 0 ELNELVSAIEEHFFQPQK Unmodified 2157.0742 0.074234161 3844 Q96G03 PGM2 Phosphoglucomutase-2 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 100.56 95.145 3 2.1627E-20 115422 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 104.21 94.248 28349000 9916300 18433000 0 0 0 0 0 0 0 0 0 0 0 0 0 12832 3844 11715 108546;108547;108548 86770;86771;86772 86771 3 ELNENQLVR Unmodified 1113.5778 0.57783619 2977 Q6UVJ0 SASS6 Spindle assembly abnormal protein 6 homolog yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 39.678 39.758 2 0.027398 44218 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 49.423 23.008 43973000 0 0 0 4038800 3560800 9279500 5348300 4057200 0 5278000 6187700 6223300 0 0 0 12833 2977 11716 108549;108550;108551;108552;108553;108554;108555;108556 86773;86774 86774 2 ELNENQLVRK Unmodified 1241.6728 0.67279921 2977 Q6UVJ0 SASS6 Spindle assembly abnormal protein 6 homolog yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 29.762 30.065 3 0.0010995 31305 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.572 59.351 75379000 0 0 0 0 0 5446600 0 9236100 6993300 0 9995700 0 18728000 9254300 15725000 12834 2977 11717 108557;108558;108559;108560;108561;108562;108563 86775;86776;86777;86778;86779 86776 5 ELNFVTDSVEQELPSSPK Unmodified 2017.9844 0.9844161 3472 Q8TAP6 CEP76 Centrosomal protein of 76 kDa yes yes 0 0 0 By MS/MS 2.67 0.471 1 2 3 85.316 81.568 2;3 6.9448E-05 101381 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.62 96.091 25866000 0 25866000 0 0 0 0 0 0 0 0 0 0 0 0 0 12835 3472 11718 108564;108565;108566 86780;86781;86782 86780 3 ELNGNQLMEK Oxidation (M) 1190.5601 0.56013721 1800 P57773 GJA9 Gap junction alpha-9 protein yes yes 0 1 0 By MS/MS 10 0 1 1 75.509 75.726 2 0.013744 87432 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 46.994 23.226 4102300 0 0 0 0 0 0 0 0 0 0 4102300 0 0 0 0 12836 1800 11719 108567 86783 86783 2918 1 ELNGTAPEEK Unmodified 1086.5193 0.51931826 5085 Q9Y263 PLAA Phospholipase A-2-activating protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.72 2 13 1 1 2 1 1 1 1 1 1 1 1 1 1 1 15.23 14.815 2 0.00050331 14223 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 125.16 73.373 132190000 12822000 19888000 0 0 2824300 8244500 6282500 4740200 3094600 10309000 13082000 12274000 7529500 11802000 19292000 12837 5085 11720 108568;108569;108570;108571;108572;108573;108574;108575;108576;108577;108578;108579;108580;108581;108582 86784;86785;86786;86787;86788;86789;86790;86791;86792;86793;86794;86795;86796;86797;86798 86791 14 ELNHMLSDTGNRK Unmodified 1513.7307 0.73072479 3837 Q96FQ6 S100A16 Protein S100-A16 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 2 1 1 1 1 1 1 1 1 1 1 1 1 26.521 25.516 2;3 5.1839E-14 27148 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 119.88 108.09 192540000 75138000 0 6867500 19891000 0 0 0 10460000 7139800 8239500 9582300 8773300 9433200 8389400 28623000 12838 3837 11721 108583;108584;108585;108586;108587;108588;108589;108590;108591;108592;108593;108594;108595;108596 86799;86800;86801;86802;86803;86804;86805;86806;86807;86808;86809;86810;86811;86812;86813 86813 14 ELNHMLSDTGNRK Oxidation (M) 1529.7256 0.72563941 3837 Q96FQ6 S100A16 Protein S100-A16 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 3 9 2 1 1 1 1 1 1 1 1 1 1 13.681 12.877 3 0.00010831 20199 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.547 88.94 212730000 152200000 0 12864000 12896000 2610500 4722800 0 5920600 2666600 0 4408900 7611200 4413000 2408100 0 12839 3837 11721 108597;108598;108599;108600;108601;108602;108603;108604;108605;108606;108607;108608 86814;86815;86816;86817;86818 86815 5354 5 ELNHPNIVK Unmodified 1062.5822 0.58219329 1180 P24941 CDK2 Cyclin-dependent kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 6.57 3.96 3 4 1 1 1 1 1 1 1 30.46 28.443 2 0.002513 38557 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.15 60.826 337870000 94802000 106630000 74924000 0 13575000 0 14720000 0 11719000 0 0 0 0 21507000 0 12840 1180 11722 108609;108610;108611;108612;108613;108614;108615 86819;86820;86821;86822;86823 86820 3 ELNHYLEAEK Unmodified 1244.6037 0.60371659 2510 Q15276 RABEP1 Rab GTPase-binding effector protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 42.845 36.9 3 0.0065842 48351 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 50.791 14.277 129620000 14177000 115440000 0 0 0 0 0 0 0 0 0 0 0 0 0 12841 2510 11723 108616;108617 86824 86824 1 ELNITAAK Unmodified 858.48108 0.48108226 1871 P62081 RPS7 40S ribosomal protein S7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 33.577 33.714 2 0.011282 36672 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 77.282 23.728 627690000 0 0 0 46750000 51639000 43790000 43212000 42134000 35875000 62815000 80204000 81563000 70662000 69048000 0 12842 1871 11724 108618;108619;108620;108621;108622;108623;108624;108625;108626;108627;108628 86825;86826;86827;86828;86829;86830;86831 86828 3 ELNLAISR Unmodified 914.51853 0.5185304 1234 P28340 POLD1 DNA polymerase delta catalytic subunit yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 2 1 1 1 54.842 54.974 2 0.0067966 62184 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 96.492 26.493 105220000 0 0 0 4944200 7977800 7799000 7105100 6783200 9007700 6361300 10746000 13437000 11578000 8029800 11450000 12843 1234 11725 108629;108630;108631;108632;108633;108634;108635;108636;108637;108638;108639;108640;108641 86832;86833;86834;86835;86836;86837;86838;86839;86840;86841;86842 86833 11 ELNLDSSNFPGVK Unmodified 1418.7042 0.70415892 1181 P25054 APC Adenomatous polyposis coli protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 74.11 74.227 2 1.1657E-06 85614 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 92.538 20.846 31532000 0 0 0 0 2759000 0 2852000 0 0 4251100 4835100 4176800 4326200 2921800 5410400 12844 1181 11726 108642;108643;108644;108645;108646;108647;108648;108649;108650 86843;86844;86845;86846;86847;86848;86849;86850;86851 86843 9 ELNLSFCEIK Unmodified 1251.6169 0.61692381 1495 P46060 RANGAP1 Ran GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 5.4 3.77 2 1 2 2 1 1 1 80.645 78.619 2 0.0035327 94024 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 105.78 39.711 111570000 0 80712000 2427400 0 0 0 0 0 0 0 0 11771000 0 0 16659000 12845 1495 11727 108651;108652;108653;108654;108655 86852;86853;86854;86855;86856 86854 5 ELNMIIMLPDETTDLR 2 Oxidation (M) 1934.9329 0.93291458 1344 P35237 SERPINB6 Serpin B6 yes yes 0 2 0 By matching By matching By MS/MS 10 0 3 1 1 1 85.084 85.242 2 5.2902E-11 98462 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.401 76.007 10045000 0 0 0 0 0 0 0 0 0 0 2023300 0 0 1736500 6285200 12846 1344 11728 108656;108657;108658 86857 86857 2035;2036 1 ELNMIIMLPDETTDLRTVEK Oxidation (M) 2376.1916 0.19164846 1344 P35237 SERPINB6 Serpin B6 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 2 3 1 91.127 85.836 3 5.9189E-30 110040 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 118.46 110.27 274560000 146290000 126290000 1977500 0 0 0 0 0 0 0 0 0 0 0 0 12847 1344 11729 108659;108660;108661;108662;108663;108664 86858;86859;86860;86861;86862;86863;86864 86862 2035;2036 7 ELNMIIMLPDETTDLRTVEK Unmodified 2360.1967 0.19673384 1344 P35237 SERPINB6 Serpin B6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 4 1 1 2 94.123 89.647 3 6.7218E-59 113728 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 138.04 125.57 189860000 163940000 24511000 1409500 0 0 0 0 0 0 0 0 0 0 0 0 12848 1344 11729 108665;108666;108667;108668 86865;86866;86867 86867 3 ELNMIIMLPDETTDLRTVEK 2 Oxidation (M) 2392.1866 0.18656308 1344 P35237 SERPINB6 Serpin B6 yes yes 0 2 1 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 85.742 82.915 3 3.0079E-07 98808 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 82.609 79.306 41542000 0 32925000 8616400 0 0 0 0 0 0 0 0 0 0 0 0 12849 1344 11729 108669;108670 86868;86869 86868 2035;2036 2 ELNNTCEPVVTQPK Unmodified 1627.7876 0.78757097 3633 Q92598 HSPH1 Heat shock protein 105 kDa yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42.098 41.317 2 3.8268E-18 51383 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 147.91 127.04 273950000 19424000 37952000 0 0 6556500 8177600 8483100 6651800 6816000 11584000 33688000 34023000 10850000 20614000 69134000 12850 3633 11730 108671;108672;108673;108674;108675;108676;108677;108678;108679;108680;108681;108682;108683;108684 86870;86871;86872;86873;86874;86875;86876;86877;86878;86879;86880;86881;86882;86883;86884;86885 86873 16 ELNPEEGEMVEEK Unmodified 1531.6712 0.67120381 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 46.549 46.946 2 0.0011281 52766 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 64.73 57.163 18857000 0 0 0 0 0 0 0 0 0 4870100 4885500 0 0 3512400 5589300 12851 5049 11731 108685;108686;108687;108688 86886;86887;86888;86889 86888 4 ELNPSLNFK Unmodified 1060.5553 0.55530983 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 61.478 60.807 2 0.00067391 77992 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 147.34 102.72 480070000 0 221000000 3058900 0 0 24659000 21249000 0 17415000 29147000 28311000 34155000 33699000 30102000 37269000 12852 19 11732 108689;108690;108691;108692;108693;108694;108695;108696;108697;108698;108699 86890;86891;86892;86893;86894;86895;86896;86897;86898;86899;86900 86893 11 ELNQVMEQLGDAR Unmodified 1501.7195 0.7194914 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 73.101 73.236 2 1.2171E-12 84328 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 126.19 100.34 88960000 0 0 0 0 5795200 0 3862900 7691600 0 11888000 12273000 20817000 0 9892200 16740000 12853 2431 11733 108700;108701;108702;108703;108704;108705;108706;108707;108708 86901;86902;86903;86904;86905;86906;86907;86908;86909 86906 9 ELNQVMEQLGDAR Oxidation (M) 1517.7144 0.71440603 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 1 0 By matching By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 49.559 49.677 2 2.954E-13 55800 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 119.45 83.131 20862000 0 0 0 0 6953700 0 0 0 0 5875300 0 0 0 0 8033000 12854 2431 11733 108709;108710;108711;108712;108713 86910;86911;86912 86912 3992 3 ELNQWEALTEYGQSK Unmodified 1794.8424 0.84244331 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 0 0 By MS/MS 2 0 1 1 84.033 79.312 2 0.00081894 98623 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.37 92.898 32451000 0 32451000 0 0 0 0 0 0 0 0 0 0 0 0 0 12855 5189 11734 108714 86913;86914 86914 2 ELNVCREQLLEREEEIAELK Unmodified 2499.2639 0.2639022 2239 Q13136 PPFIA1 Liprin-alpha-1 yes yes 0 0 2 By MS/MS 2 0 1 1 84.581 76.45 4 0.00037628 99893 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.088 39.337 14619000 14619000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12856 2239 11735 108715 86915 86915 1 ELNVSFINEK Unmodified 1191.6136 0.61355299 1577 P49585 PCYT1A Choline-phosphate cytidylyltransferase A no no 0 0 0 By MS/MS 2.5 0.5 1 1 2 74.898 70.593 2 0.0049502 88355 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.815 71.641 104850000 0 104850000 0 0 0 0 0 0 0 0 0 0 0 0 0 12857 1577 11736 108716;108717 86916;86917 86916 1 ELNYFAK Unmodified 883.44397 0.44396847 733 P00558 PGK1 Phosphoglycerate kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 50.52 44.645 2 0.047334 57880 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.748 35.274 10448000000 743860000 9363900000 340030000 0 0 0 0 0 0 0 0 0 0 0 0 12858 733 11737 108718;108719;108720 86918 86918 1 ELNYNLDTHTSTGR Unmodified 1619.754 0.75396265 4630 Q9NSV4 DIAPH3 Protein diaphanous homolog 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.975 42.152 3 4.2105E-19 46650 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 128.96 122.07 488510000 0 0 0 24199000 33372000 37209000 39071000 29943000 30854000 48084000 51881000 53165000 43120000 43001000 54609000 12859 4630 11738 108721;108722;108723;108724;108725;108726;108727;108728;108729;108730;108731;108732 86919;86920;86921;86922;86923;86924;86925;86926;86927;86928;86929;86930;86931;86932;86933;86934 86932 14 ELNYNLDTHTSTGRIK Unmodified 1860.933 0.93298965 4630 Q9NSV4 DIAPH3 Protein diaphanous homolog 3 yes yes 0 0 1 By MS/MS 2 0 2 2 53.889 45.826 3;4 0.00080168 63178 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.431 59.851 53671000 53671000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12860 4630 11739 108733;108734 86935;86936 86936 1 ELPAAEPVLSPLEGTK Unmodified 1649.8876 0.88760259 4243 Q9BY77 POLDIP3 Polymerase delta-interacting protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.08 2.5 2 1 22 2 1 2 2 2 2 2 2 1 2 2 2 2 1 80.745 80.37 2;3 2.8563E-21 92567 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 117.2 92.857 850510000 0 363770000 1163100 17771000 27257000 35273000 35117000 30909000 30340000 50706000 54200000 60076000 39004000 45433000 59486000 12861 4243 11740 108735;108736;108737;108738;108739;108740;108741;108742;108743;108744;108745;108746;108747;108748;108749;108750;108751;108752;108753;108754;108755;108756;108757;108758;108759 86937;86938;86939;86940;86941;86942;86943;86944;86945;86946;86947;86948;86949;86950;86951;86952;86953;86954 86942 16 ELPAAVAPAGPASLAR Unmodified 1489.8253 0.8252771 641 O95336 PGLS 6-phosphogluconolactonase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.997 72.066 2 1.7176E-07 83011 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 86.772 69.541 235150000 0 0 0 14158000 9585400 29042000 12214000 12549000 8251200 21407000 24687000 30876000 13013000 18400000 40967000 12862 641 11741 108760;108761;108762;108763;108764;108765;108766;108767;108768;108769;108770;108771 86955;86956;86957;86958;86959;86960;86961;86962;86963;86964;86965;86966;86967 86965 13 ELPAPMLSAIQK Unmodified 1296.7112 0.71115855 3005 Q6ZRQ5 MMS22L Protein MMS22-like yes yes 0 0 0 By MS/MS 2 0 1 1 84.773 80.03 2 0.0091518 99537 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.18 70.299 25161000 0 25161000 0 0 0 0 0 0 0 0 0 0 0 0 0 12863 3005 11742 108772 86968 86968 1 ELPAVELR Unmodified 925.52328 0.52328142 5285 Q9Y6I4 USP3 Ubiquitin carboxyl-terminal hydrolase 3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.583 59.693 2 0.01524 67784 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 69.198 19.839 206100000 0 0 0 11659000 14730000 15936000 15420000 15863000 12080000 18917000 22746000 21675000 17427000 16137000 23514000 12864 5285 11743 108773;108774;108775;108776;108777;108778;108779;108780;108781;108782;108783;108784 86969;86970;86971;86972 86970 4 ELPDGPSPLLK Unmodified 1164.639 0.63903946 192 O14613 CDC42EP2 Cdc42 effector protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.159 67.242 2 0.00037948 76151 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.308 64.527 132250000 0 0 0 6786500 8022100 9437300 10936000 9896600 9884100 10859000 16080000 14084000 11622000 9149900 15488000 12865 192 11744 108785;108786;108787;108788;108789;108790;108791;108792;108793;108794;108795;108796 86973;86974;86975;86976;86977;86978;86979;86980;86981;86982;86983;86984 86976 12 ELPDLEDLMK Oxidation (M) 1217.585 0.58495498 4506 Q9HC38 GLOD4 Glyoxalase domain-containing protein 4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 5.4 3.77 2 1 2 2 1 1 1 77.401 75.357 2 0.0024985 91414 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 99.802 66.682 605930000 0 577190000 11277000 0 0 0 0 0 0 0 0 6764700 0 0 10706000 12866 4506 11745 108797;108798;108799;108800;108801 86985;86986;86987;86988 86988 5938 4 ELPDLEDLMK Unmodified 1201.59 0.59004036 4506 Q9HC38 GLOD4 Glyoxalase domain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 3 1 92.086 87.364 2 0.0016854 105044 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 109.71 95.557 752660000 103210000 640700000 8757100 0 0 0 0 0 0 0 0 0 0 0 0 12867 4506 11745 108802;108803;108804;108805;108806 86989;86990;86991;86992;86993 86991 5 ELPDPSQRPLGEPSAGLGEYLK Unmodified 2352.1961 0.19614021 4507 Q9HC52 CBX8 Chromobox protein homolog 8 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 79.643 79.786 3 9.5495E-06 92231 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 50.752 42.663 58577000 0 0 0 0 0 3799700 1738000 4429200 5646900 11502000 0 6857600 0 2665000 21938000 12868 4507 11746 108807;108808;108809;108810;108811;108812;108813;108814 86994;86995;86996;86997;86998 86994 5 ELPDTVGELR Unmodified 1127.5823 0.58225287 2979 Q6UWE0 LRSAM1 E3 ubiquitin-protein ligase LRSAM1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 57.993 58.161 2 0.0029455 65321 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 78.516 50.342 55020000 0 0 0 5959400 0 6941800 4201300 0 3960400 5764000 7025500 6795200 0 5917700 8455000 12869 2979 11747 108815;108816;108817;108818;108819;108820;108821;108822;108823;108824 86999;87000;87001;87002;87003;87004;87005;87006;87007;87008;87009;87010 87007 12 ELPDVLERVK Unmodified 1196.6765 0.6764876 1533 P48147 PREP Prolyl endopeptidase yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 75.92 69.384 3 1.9096E-05 90153 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 114.97 93.596 152150000 59780000 92365000 0 0 0 0 0 0 0 0 0 0 0 0 0 12870 1533 11748 108825;108826 87011;87012 87012 1 ELPELLQR Unmodified 996.5604 0.56039521 3549 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 68.262 67.699 2 0.0066426 78582 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 99.139 67.074 226140000 0 57321000 0 16867000 8925900 31745000 15477000 0 0 23374000 24109000 0 0 18414000 29912000 12871 3549 11749 108827;108828;108829;108830;108831;108832;108833;108834;108835 87013;87014;87015;87016;87017;87018 87017 4 ELPEQLQEHAIEDK Unmodified 1677.821 0.82097959 2532 Q15424 SAFB Scaffold attachment factor B1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 1 1 1 1 1 1 1 2 1 1 1 55.479 54.542 2;3 2.3665E-31 73016 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 151.98 113.67 385240000 6876900 136570000 0 20329000 20583000 0 25331000 22809000 0 0 28997000 38507000 22174000 28082000 34985000 12872 2532 11750 108836;108837;108838;108839;108840;108841;108842;108843;108844;108845;108846;108847 87019;87020;87021;87022;87023;87024;87025;87026;87027;87028 87022 9 ELPESGIQLGTPR Unmodified 1395.7358 0.73579339 4916 Q9UI10 EIF2B4 Translation initiation factor eIF-2B subunit delta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 66.325 66.479 2 0.00087805 75377 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 83.397 66.726 113140000 0 0 0 0 6046600 9420100 10082000 6923200 8114900 10995000 10607000 16366000 8778500 9191000 16618000 12873 4916 11751 108848;108849;108850;108851;108852;108853;108854;108855;108856;108857;108858 87029;87030;87031;87032 87031 3 ELPEWSEK Unmodified 1016.4815 0.48147619 3301 Q8N0X7 SPG20 Spartin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 48.765 48.872 2 0.0068947 54953 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 91.9 74.936 536520000 0 0 0 30954000 35985000 43496000 38341000 52571000 35830000 50921000 56374000 85278000 59194000 47573000 0 12874 3301 11752 108859;108860;108861;108862;108863;108864;108865;108866;108867;108868;108869 87033;87034;87035;87036;87037;87038;87039;87040;87041;87042;87043;87044 87035 10 ELPEYYELIR Unmodified 1323.6711 0.67106787 1656;1655 P51532;P51531 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.301 82.362 2 0.0016947 95248 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 109.71 95.945 134660000 0 0 0 3595900 4500300 12358000 5120500 9206000 6078400 12808000 9363200 10459000 8953500 12085000 40127000 12875 1656;1655 11753 108870;108871;108872;108873;108874;108875;108876;108877;108878;108879;108880;108881 87045;87046;87047;87048;87049;87050;87051;87052;87053;87054;87055;87056 87045 12 ELPGFLQSGK Unmodified 1074.571 0.5709599 1197 P25815 S100P Protein S100-P yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.53 3 2 11 2 2 1 1 1 1 1 1 1 1 1 1 1 1 68.837 67.27 2 0.0015463 85950 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.41 96.412 2300900000 100100000 1818200000 31911000 25945000 6056200 0 12455000 13053000 7286100 16395000 48349000 49229000 13809000 34427000 123700000 12876 1197 11754 108882;108883;108884;108885;108886;108887;108888;108889;108890;108891;108892;108893;108894;108895;108896;108897 87057;87058;87059;87060;87061;87062;87063;87064;87065;87066;87067;87068;87069;87070 87057 14 ELPGQTLHWGPEATEAAGR Unmodified 2018.981 0.98100248 2381 Q14160 SCRIB Protein scribble homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.017 71.091 3 4.9462E-05 82232 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 61.477 52.072 81717000 0 0 0 3925500 3426800 6737200 3243400 6141200 5240100 7838500 6423800 9683900 7321100 5437600 16298000 12877 2381 11755 108898;108899;108900;108901;108902;108903;108904;108905;108906;108907;108908;108909 87071;87072;87073;87074;87075;87076;87077;87078;87079;87080;87081;87082;87083 87080 10 ELPLGVQYHVFVDPAGAK Unmodified 1939.0203 0.020348097 211 O14772 FPGT Fucose-1-phosphate guanylyltransferase yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 89.999 83.497 3 0.00034635 106318 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.577 41.499 33316000 15195000 18121000 0 0 0 0 0 0 0 0 0 0 0 0 0 12878 211 11756 108910;108911 87084;87085 87085 2 ELPPAAAIGATSLVAAPHSSSSSPSK Unmodified 2432.2547 0.25471772 2463 Q14C86 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.424 77.481 3 2.3237E-23 89325 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 79.445 55.146 197180000 0 0 0 10248000 9833800 16061000 12434000 12812000 9181200 21289000 21064000 20185000 17124000 21232000 25721000 12879 2463 11757 108912;108913;108914;108915;108916;108917;108918;108919;108920;108921;108922;108923 87086;87087;87088;87089;87090;87091;87092;87093;87094;87095;87096;87097;87098;87099;87100 87095 15 ELPPDQAEYCIAR Unmodified 1560.7242 0.72424243 356;971 O43707;P12814 ACTN4;ACTN1 Alpha-actinin-4;Alpha-actinin-1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.17 2.36 1 1 16 2 1 2 1 1 2 1 2 1 1 1 2 1 58.649 57.985 2 9.8821E-16 66300 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 147.95 130.14 333910000 0 89896000 0 10681000 7284200 16703000 9998400 8888800 8463900 14122000 33990000 30826000 11970000 21273000 69811000 12880 356;971 11758 108924;108925;108926;108927;108928;108929;108930;108931;108932;108933;108934;108935;108936;108937;108938;108939;108940;108941 87101;87102;87103;87104;87105;87106;87107;87108;87109;87110;87111;87112;87113;87114;87115;87116;87117;87118;87119;87120;87121;87122;87123;87124;87125;87126;87127;87128;87129;87130;87131;87132;87133;87134;87135;87136;87137 87131 36 ELPPFWEQR Unmodified 1200.5928 0.59275797 2411 Q14527 HLTF Helicase-like transcription factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.138 78.198 2 0.0095413 89780 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 73.931 65.018 405930000 0 0 0 19517000 19476000 36645000 20743000 29006000 30771000 45492000 39590000 49127000 35677000 31850000 48037000 12881 2411 11759 108942;108943;108944;108945;108946;108947;108948;108949;108950;108951;108952;108953 87138;87139;87140;87141;87142;87143;87144;87145;87146;87147;87148 87142 11 ELPPGVEELLNK Unmodified 1336.7238 0.72383172 2444 Q14764 MVP Major vault protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 86.127 85.045 2 0.0022246 106088 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.2 74.439 278610000 9116800 212150000 2309200 0 0 4363400 4341200 6353700 4206200 5316400 5360500 5403300 4665300 4596800 10431000 12882 2444 11760 108954;108955;108956;108957;108958;108959;108960;108961;108962;108963;108964;108965;108966 87149;87150;87151;87152;87153;87154;87155;87156;87157;87158 87152 10 ELPPPSEEIK Unmodified 1137.5918 0.59175492 3839 Q96FV9 THOC1 THO complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 43.108 43.286 2 0.0089911 47152 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 61.679 41.902 138100000 0 0 0 8627400 7936100 8003700 10051000 9938400 0 11685000 15314000 14892000 19344000 14371000 17941000 12883 3839 11761 108967;108968;108969;108970;108971;108972;108973;108974;108975;108976;108977 87159;87160;87161;87162;87163;87164;87165;87166 87163 8 ELPQFATGENLPR Unmodified 1470.7467 0.74669243 4278 Q9BZZ5 API5 Apoptosis inhibitor 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 1 2 2 2 73.384 73.44 2;3 1.0519E-12 84020 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 130.41 108.08 1585200000 0 0 0 73920000 82474000 143790000 98342000 108130000 100030000 159490000 167600000 162590000 128110000 128910000 231850000 12884 4278 11762 108978;108979;108980;108981;108982;108983;108984;108985;108986;108987;108988;108989;108990;108991;108992;108993;108994;108995;108996;108997;108998;108999;109000 87167;87168;87169;87170;87171;87172;87173;87174;87175;87176;87177;87178;87179;87180;87181;87182;87183;87184;87185;87186;87187 87173 19 ELPQLVASVIESESEILHHEK Unmodified 2386.238 0.23800503 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 99.945 94.205 4 5.5654E-13 114918 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 94.057 89.96 23484000 15253000 8231800 0 0 0 0 0 0 0 0 0 0 0 0 0 12885 2775 11763 109001;109002 87188;87189 87188 2 ELPQPLLSVEYLK Unmodified 1527.8548 0.8548459 3319 Q8N392 ARHGAP18 Rho GTPase-activating protein 18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 89.948 90.088 2 0.015684 104415 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.875 24.184 7551000 0 0 0 0 0 1066000 0 639240 0 2091500 987440 0 0 0 2766700 12886 3319 11764 109003;109004;109005;109006;109007 87190 87190 1 ELPQVSFVK Unmodified 1045.5808 0.5807963 570 O76003 GLRX3 Glutaredoxin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.79 2.8 2 1 16 2 1 2 2 2 1 1 1 2 1 1 1 1 1 71.923 71.323 2 0.0033124 81807 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 93.429 32.78 3873000000 0 3181500000 48108000 24272000 44904000 103730000 40098000 25428000 25080000 58555000 61532000 54726000 44711000 46107000 114230000 12887 570 11765 109008;109009;109010;109011;109012;109013;109014;109015;109016;109017;109018;109019;109020;109021;109022;109023;109024;109025;109026 87191;87192;87193;87194;87195;87196;87197;87198;87199;87200;87201;87202;87203;87204;87205;87206 87191 13 ELPRDFPYEEDSRPR Unmodified 1904.9017 0.90168952 3874 Q96I25 RBM17 Splicing factor 45 yes yes 0 0 2 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 54.642 54.85 4 0.0088772 62469 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 29.341 24.131 95236000 0 0 0 0 2605600 7434300 5549100 5973700 6612800 0 15081000 17332000 10014000 6839200 17795000 12888 3874 11766 109027;109028;109029;109030;109031;109032;109033;109034;109035;109036 87207;87208 87207 2 ELPRPVLEGQQSER Unmodified 1636.8533 0.85328277 4189 Q9BVJ6;Q5TAP6 UTP14A;UTP14C U3 small nucleolar RNA-associated protein 14 homolog A;U3 small nucleolar RNA-associated protein 14 homolog C yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 46.979 47.163 3 0.0018946 52446 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 49.794 30.054 64108000 0 0 0 0 5163100 5549500 4766700 5370900 3275700 7010400 8514000 10528000 8253400 5675700 0 12889 4189 11767 109037;109038;109039;109040;109041;109042;109043;109044;109045;109046 87209;87210;87211;87212;87213;87214;87215;87216 87215 8 ELPSAVSR Unmodified 857.46068 0.46068117 154 O00429 DNM1L Dynamin-1-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 27.743 27.927 2 0.0060247 29651 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 104.37 17.499 414740000 0 0 0 23717000 26820000 53653000 31644000 29005000 24678000 47579000 38768000 57042000 0 34933000 46905000 12890 154 11768 109047;109048;109049;109050;109051;109052;109053;109054;109055;109056;109057 87217;87218;87219;87220;87221;87222;87223;87224 87221 8 ELPSFLGK Unmodified 889.49092 0.49091866 1206 P26447 S100A4 Protein S100-A4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 70.245 70.321 1;2 0.0090865 80798 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 126.28 87.46 7814700000 0 0 0 301540000 332150000 433200000 462160000 427850000 342150000 511810000 912020000 997650000 605110000 739140000 1750000000 12891 1206 11769 109058;109059;109060;109061;109062;109063;109064;109065;109066;109067;109068;109069;109070;109071;109072;109073;109074;109075;109076;109077;109078;109079;109080;109081 87225;87226;87227;87228;87229;87230;87231;87232;87233;87234;87235;87236;87237;87238;87239;87240;87241;87242;87243;87244;87245;87246;87247;87248 87228 17 ELPSGQYTEAEEFFVK Unmodified 1872.8782 0.87816011 4517 Q9HCK8 CHD8 Chromodomain-helicase-DNA-binding protein 8 yes yes 0 0 0 By MS/MS 10 0 1 1 84.078 84.179 2 0.039654 97508 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 56.205 42.804 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12892 4517 11770 109082 87249 87249 1 ELPSHVQAMHK Unmodified 1275.6394 0.63939059 3078 Q7Z333 SETX Probable helicase senataxin yes yes 0 0 0 By MS/MS 2 0 1 1 29.71 24.09 3 0.0027124 33851 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.198 32.802 19358000 19358000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12893 3078 11771 109083 87250 87250 1 ELPSIPENR Unmodified 1053.5455 0.54547343 3516 Q8TEH3 DENND1A DENN domain-containing protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 49.595 49.699 2 0.011592 56641 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 62.582 37.763 38407000 0 0 0 0 7978600 0 7279300 12230000 0 0 0 0 0 0 10920000 12894 3516 11772 109084;109085;109086;109087;109088 87251;87252;87253;87254 87254 4 ELPSTFGQLSALK Unmodified 1389.7504 0.75038083 3378 Q8N9N7 LRRC57 Leucine-rich repeat-containing protein 57 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 81.716 81.758 2 0.0018958 94563 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 77.744 59.433 70801000 0 0 0 2403800 4333100 8476300 6529700 6827300 4500100 12872000 9693400 9100800 6063900 0 0 12895 3378 11773 109089;109090;109091;109092;109093;109094;109095;109096;109097;109098 87255;87256;87257;87258;87259;87260;87261;87262 87261 8 ELPTDMELSAHDDGAPAGVR Unmodified 2079.9531 0.95313275 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 66.32 66.312 3 0.0097177 75508 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 34.649 25.119 49147000 0 0 0 3860500 4633000 0 0 5507900 0 0 0 9462700 0 0 25683000 12896 2193 11774 109099;109100;109101;109102;109103 87263 87263 0 ELPTDMELSAHDDGAPAGVR Oxidation (M) 2095.948 0.94804737 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 54.904 55.148 3 1.7758E-05 62480 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 52.614 47.904 68455000 0 0 0 0 0 7416700 8312100 0 6606100 7871000 9457900 14146000 7909400 6735900 0 12897 2193 11774 109104;109105;109106;109107;109108;109109;109110;109111 87264 87264 3558 1 ELPTEPPYTAYVGNLPFNTVQGDIDAIFK Unmodified 3208.5968 0.59684688 2490 Q15056 EIF4H Eukaryotic translation initiation factor 4H yes yes 0 0 0 By MS/MS 2 0 1 1 101.9 97.183 3 6.7349E-12 119915 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.097 68.732 415790000 0 415790000 0 0 0 0 0 0 0 0 0 0 0 0 0 12898 2490 11775 109112 87265 87265 1 ELPTPLITQPLYK Unmodified 1511.8599 0.85993128 3020 Q6ZW31 SYDE1 Rho GTPase-activating protein SYDE1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 84.201 84.297 2 0.0018558 97657 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 61.353 37.502 37139000 0 0 0 0 3599900 0 0 4159500 0 5770900 5740500 4742400 3965200 2732300 6428500 12899 3020 11776 109113;109114;109115;109116;109117;109118;109119;109120;109121 87266;87267;87268;87269;87270;87271;87272;87273 87267 8 ELPTVTTNVQNSQDK Unmodified 1672.8268 0.82679325 3746 Q96B01 RAD51AP1 RAD51-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.018 47.184 2 5.1795E-07 52886 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 99.5 92.897 510190000 0 0 0 28467000 31169000 25469000 51175000 27597000 40701000 38066000 57760000 54089000 53933000 32359000 69407000 12900 3746 11777 109122;109123;109124;109125;109126;109127;109128;109129;109130;109131;109132;109133 87274;87275;87276;87277;87278;87279;87280;87281;87282;87283;87284 87276 11 ELPTVVFR Unmodified 959.54402 0.54401687 4195 Q9BVP2 GNL3 Guanine nucleotide-binding protein-like 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 73.239 73.262 2 0.011827 84217 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.035 39.448 64311000 0 0 0 3583800 3985300 6401900 5180000 0 5270600 6748400 7851900 10219000 6416600 8653200 0 12901 4195 11778 109134;109135;109136;109137;109138;109139;109140;109141;109142;109143 87285;87286;87287;87288;87289;87290;87291;87292;87293 87291 9 ELPVNAQNYVR Unmodified 1301.6728 0.67279921 1283 P30520 ADSS Adenylosuccinate synthetase isozyme 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 61.074 59.972 2 2.8274E-05 67871 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 119.29 88.721 136420000 0 63242000 0 0 0 2744800 0 2094400 0 0 12215000 11955000 0 8959100 35214000 12902 1283 11779 109144;109145;109146;109147;109148;109149;109150;109151;109152 87294;87295;87296;87297;87298;87299;87300 87297 7 ELPVNAQNYVRFIEDELQIPVK Unmodified 2613.3803 0.38025259 1283 P30520 ADSS Adenylosuccinate synthetase isozyme 2 yes yes 0 0 1 By MS/MS 3 0 1 1 99.526 96.117 3 1.7533E-05 115337 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 66.536 59.976 7453700 0 7453700 0 0 0 0 0 0 0 0 0 0 0 0 0 12903 1283 11780 109153 87301 87301 1 ELPVPGSAEEEPPSGGGR Unmodified 1763.8326 0.83260691 1036 P16383 GCFC2 GC-rich sequence DNA-binding factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 2 54.617 54.574 2 0.00050721 61496 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.496 45.015 36915000 0 0 0 4135200 3322300 3394500 4228400 6792100 0 6492000 8550600 0 0 0 0 12904 1036 11781 109154;109155;109156;109157;109158;109159;109160;109161;109162 87302;87303;87304;87305;87306;87307 87305 5 ELPWPPTFEK Unmodified 1242.6285 0.62847478 4737 Q9NY33 DPP3 Dipeptidyl peptidase 3 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 86.781 83.566 2 0.0066726 104498 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.4 65.395 5083900 0 5083900 0 0 0 0 0 0 0 0 0 0 0 0 0 12905 4737 11782 109163;109164 87308;87309 87308 1 ELPYFEGDFWPNVLEESIK Unmodified 2311.1049 0.10486559 3662;2171 Q09472;Q92793 EP300;CREBBP Histone acetyltransferase p300;CREB-binding protein no no 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 100.86 97.306 3 0.047608 117817 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 15.422 0 35245000 0 33026000 2219500 0 0 0 0 0 0 0 0 0 0 0 0 12906 2171;3662 11783 109165;109166 87310 87310 1 ELQAANESK Unmodified 988.48254 0.48253882 4890 Q9UH65 SWAP70 Switch-associated protein 70 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 7.33 3.77 2 4 1 1 1 1 1 1 7.9719 6.8286 2 0.0050542 9270 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 111.95 41.035 38503000 13371000 18869000 0 1216300 0 1930700 1823700 1291300 0 0 0 0 0 0 0 12907 4890 11784 109167;109168;109169;109170;109171;109172 87311;87312;87313;87314 87314 4 ELQAEQEDR Unmodified 1116.5047 0.50473083 2033 Q00341 HDLBP Vigilin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 11.99 12.138 2 0.0028051 10662 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 136.8 89.73 242100000 0 0 0 12520000 13123000 31278000 18944000 13177000 17358000 22565000 14440000 27878000 15129000 23076000 32607000 12908 2033 11785 109173;109174;109175;109176;109177;109178;109179;109180;109181;109182;109183;109184 87315;87316;87317;87318;87319;87320;87321;87322;87323;87324;87325;87326;87327;87328 87326 14 ELQAEQEDRALR Unmodified 1456.727 0.72701962 2033 Q00341 HDLBP Vigilin yes yes 0 0 1 By MS/MS 2 0 1 1 32.653 29.381 3 0.010446 37089 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 42.629 32.577 10730000 0 0 10730000 0 0 0 0 0 0 0 0 0 0 0 0 12909 2033 11786 109185 87329 87329 1 ELQAEQEDRALRSFK Unmodified 1818.9224 0.92242497 2033 Q00341 HDLBP Vigilin yes yes 0 0 2 By MS/MS 2 0 1 1 57.242 49.061 3 0.0092258 66838 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.287 31.29 34928000 34928000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12910 2033 11787 109186 87330 87330 1 ELQAHGADELLK Unmodified 1322.683 0.68302954 257 O15144 ARPC2 Actin-related protein 2/3 complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 5.67 3.89 4 1 4 2 3 1 1 1 1 50.849 46.916 2;3 1.0927E-14 64191 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 145.23 96.432 1328000000 65478000 1231800000 0 0 0 3618000 0 0 0 0 9813600 0 0 0 17270000 12911 257 11788 109187;109188;109189;109190;109191;109192;109193;109194;109195 87331;87332;87333;87334;87335;87336;87337 87335 5 ELQALSEQLGR Unmodified 1242.6568 0.65681479 2987 Q6VN20 RANBP10 Ran-binding protein 10 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 60.025 60.289 2 0.030132 68452 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 38.754 0.20384 26856000 0 0 0 0 0 0 0 3438900 0 4365800 4666700 5655400 3891900 4837700 0 12912 2987 11789 109196;109197;109198;109199;109200;109201 87338 87338 1 ELQDQLEAEQYFSTLYK Unmodified 2104.0001 6.61646E-05 455;2296 O75116;Q13464 ROCK2;ROCK1 Rho-associated protein kinase 2;Rho-associated protein kinase 1 no no 0 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 3 1 91.944 88.067 2;3 2.3939E-72 109227 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 225.79 172.23 132670000 0 130660000 2018100 0 0 0 0 0 0 0 0 0 0 0 0 12913 455;2296 11790 109202;109203;109204;109205 87339;87340;87341;87342 87339 3 ELQDSTQMNEK Unmodified 1321.582 0.58199487 2329 Q13617 CUL2 Cullin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20.011 19.556 2 7.816E-05 20732 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 111.61 71.54 71369000 3993700 6580600 0 2994000 2368200 6843900 3226300 3541700 2051400 5826500 6827800 5749300 5250600 4019100 12096000 12914 2329 11791 109206;109207;109208;109209;109210;109211;109212;109213;109214;109215;109216;109217;109218;109219 87343;87344;87345;87346;87347;87348;87349;87350;87351;87352;87353;87354 87343 12 ELQDSTQMNEK Oxidation (M) 1337.5769 0.57690949 2329 Q13617 CUL2 Cullin-2 yes yes 0 1 0 By MS/MS 10 0 1 1 8.0847 8.4436 2 0.0299 6508 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 51.268 34.491 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12915 2329 11791 109220 87355 87355 1 ELQDVGQSLR Unmodified 1143.5884 0.58840088 2977 Q6UVJ0 SASS6 Spindle assembly abnormal protein 6 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 43.243 43.23 2 0.017043 48779 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 60.828 10.197 50666000 0 0 0 8108200 7687600 0 5902600 12704000 0 0 0 16263000 0 0 0 12916 2977 11792 109221;109222;109223;109224;109225 87356;87357;87358;87359 87359 3 ELQEAQNER Unmodified 1115.5207 0.52071524 4552 Q9NPI1 BRD7 Bromodomain-containing protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 9.9047 10.034 2 0.006387 7088 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 75.213 43.923 31564000 0 0 0 2033500 1609800 1907200 1852500 0 1446700 2887700 4024100 5176100 3465900 2453600 4706700 12917 4552 11793 109226;109227;109228;109229;109230;109231;109232;109233;109234;109235;109236 87360;87361;87362;87363;87364;87365;87366;87367;87368 87364 9 ELQEESGLTVDALHK Unmodified 1667.8366 0.83662965 1378 P36639 NUDT1 7,8-dihydro-8-oxoguanine triphosphatase yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 58.189 58.634 3 0.0071682 66022 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.823 37.552 14941000 0 0 0 0 0 0 0 0 0 0 0 3987400 0 2411200 8542200 12918 1378 11794 109237;109238;109239 87369 87369 0 ELQEEVAR Unmodified 972.48762 0.4876242 378 O43896 KIF1C Kinesin-like protein KIF1C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 23.121 22.81 2 0.022664 23935 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 60.972 15.02 7962100 0 0 0 0 7962100 0 0 0 0 0 0 0 0 0 0 12919 378 11795 109240;109241;109242;109243 87370;87371;87372;87373 87373 4 ELQELEPENK Unmodified 1227.5983 0.59829686 3652 Q92696 RABGGTA Geranylgeranyl transferase type-2 subunit alpha yes yes 0 0 0 By MS/MS 2 0 1 1 40.416 35.364 2 1.9075E-13 46087 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 185.81 166.71 70700000 0 70700000 0 0 0 0 0 0 0 0 0 0 0 0 0 12920 3652 11796 109244 87374 87374 1 ELQELLK Unmodified 871.50148 0.50148335 2446;4783 Q14789;Q9NZW5 GOLGB1;MPP6 Golgin subfamily B member 1;MAGUK p55 subfamily member 6 no no 0 0 0 By MS/MS 2.5 0.5 1 1 2 58.95 53.61 2 0.012413 68848 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.37 0 75826000 0 75826000 0 0 0 0 0 0 0 0 0 0 0 0 0 12921 2446;4783 11797 109245;109246 87375 87375 1 ELQELQDSLNAEREK Unmodified 1800.8854 0.88537076 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 56.42 56.261 3 3.2788E-28 64498 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 140.27 100.25 72724000 0 0 0 9323000 8328300 20193000 11924000 0 0 0 0 0 22956000 0 0 12922 965 11798 109247;109248;109249;109250;109251 87376;87377;87378;87379;87380;87381;87382;87383;87384 87384 9 ELQELVQYPVEHPDK Unmodified 1822.9101 0.91012895 1755 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 67.442 67.528 3 5.5368E-07 77408 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 68.751 52.569 201260000 0 0 0 12489000 4982100 0 11417000 8516000 0 10963000 31992000 25609000 10376000 19408000 65507000 12923 1755 11799 109252;109253;109254;109255;109256;109257;109258;109259;109260;109261 87385;87386;87387;87388;87389;87390;87391;87392;87393 87387 9 ELQEMEAR Oxidation (M) 1020.4546 0.45460951 2723 Q5F1R6 DNAJC21 DnaJ homolog subfamily C member 21 yes yes 0 1 0 By matching By MS/MS By MS/MS By matching By matching 10 0 5 1 1 1 1 1 10.556 10.671 2 0.019893 9280 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 55.676 40.044 5771200 0 0 0 0 254160 1343700 0 0 0 2290600 0 0 0 449400 1433400 12924 2723 11800 109262;109263;109264;109265;109266 87394;87395 87395 4368 2 ELQEMEAR Unmodified 1004.4597 0.45969489 2723 Q5F1R6 DNAJC21 DnaJ homolog subfamily C member 21 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 23.925 24.25 2 0.015996 24467 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 67.981 46.681 15355000 0 0 0 0 0 0 0 0 0 4030400 8023100 0 0 3301700 0 12925 2723 11800 109267;109268;109269 87396;87397;87398 87398 3 ELQEMEARYEK Unmodified 1424.6606 0.66057954 2723 Q5F1R6 DNAJC21 DnaJ homolog subfamily C member 21 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 40.947 36.625 3 0.0056373 47917 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.241 50.96 29993000 0 21062000 8931700 0 0 0 0 0 0 0 0 0 0 0 0 12926 2723 11801 109270;109271 87399 87399 1 ELQENQDEIENMMNAIFK Unmodified 2194.9875 0.98746934 3326 Q8N3U4 STAG2 Cohesin subunit SA-2 yes yes 0 0 0 By MS/MS 2.25 0.433 3 1 4 99.698 95.326 2;3 7.4831E-73 118052 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 175.21 163.58 56323000 0 56323000 0 0 0 0 0 0 0 0 0 0 0 0 0 12927 3326 11802 109272;109273;109274;109275 87400;87401;87402;87403 87401 3 ELQEQGEIR Unmodified 1100.5462 0.54620171 1606 P49842 STK19 Serine/threonine-protein kinase 19 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 23.631 23.982 2 0.0042856 25448 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 87.323 18.408 38318000 0 0 0 0 0 0 4095700 0 2002900 5344300 4516600 8150500 4880900 3584600 5742500 12928 1606 11803 109276;109277;109278;109279;109280;109281;109282;109283;109284 87404;87405;87406;87407 87405 3 ELQEQLK Unmodified 886.476 0.47599688 533 O75694 NUP155 Nuclear pore complex protein Nup155 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 1 1 1 1 2 2 2 2 2 2 1 22.818 23.074 2 0.02333 22672 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 90.986 0 308470000 0 0 0 14170000 13439000 21482000 15883000 15314000 17456000 39219000 33135000 43440000 30069000 32639000 32224000 12929 533 11804 109285;109286;109287;109288;109289;109290;109291;109292;109293;109294;109295;109296;109297;109298;109299;109300;109301;109302 87408;87409;87410;87411;87412;87413;87414 87411 7 ELQEQMSR Oxidation (M) 1035.4655 0.46550855 3043 Q7L1Q6 BZW1 Basic leucine zipper and W2 domain-containing protein 1 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.1863 7.3099 2 0.0039811 5159 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 104.21 74.402 386840000 0 0 0 19629000 22789000 32474000 28823000 23873000 19243000 36283000 53748000 38680000 33716000 36736000 40852000 12930 3043 11805 109303;109304;109305;109306;109307;109308;109309;109310;109311;109312;109313;109314 87415;87416;87417;87418;87419;87420;87421;87422 87416 4665 7 ELQEQMSR Unmodified 1019.4706 0.47059393 3043 Q7L1Q6 BZW1 Basic leucine zipper and W2 domain-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 20.801 17.088 2 0.038396 22564 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.342 30.04 3998700 0 3998700 0 0 0 0 0 0 0 0 0 0 0 0 0 12931 3043 11805 109315 87423 87423 1 ELQEQMSRGDPFK Unmodified 1563.7351 0.73514147 3043 Q7L1Q6 BZW1 Basic leucine zipper and W2 domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8 3.46 5 15 1 2 2 1 1 1 2 1 1 2 1 1 1 1 2 50.403 49.163 2;3 1.1966E-74 64246 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 213.59 189.08 898790000 40327000 336110000 144690000 25255000 15915000 26234000 27581000 19703000 31640000 32780000 41091000 36399000 25832000 26365000 68877000 12932 3043 11806 109316;109317;109318;109319;109320;109321;109322;109323;109324;109325;109326;109327;109328;109329;109330;109331;109332;109333;109334;109335 87424;87425;87426;87427;87428;87429;87430;87431;87432;87433;87434;87435;87436;87437;87438;87439 87428 16 ELQEQMSRGDPFK Oxidation (M) 1579.7301 0.73005609 3043 Q7L1Q6 BZW1 Basic leucine zipper and W2 domain-containing protein 1 yes yes 0 1 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 33.446 33.719 3 0.0044753 37525 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 41.684 27.654 115840000 0 0 0 10283000 0 7893800 0 8688600 0 15450000 17966000 19367000 12273000 9827200 14095000 12933 3043 11806 109336;109337;109338;109339;109340;109341;109342;109343;109344 87440 87440 4665 1 ELQERLSQECPIK Unmodified 1628.8192 0.81920545 5280 Q9Y6E2 BZW2 Basic leucine zipper and W2 domain-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 2 2 51.388 46.076 3 0.0013474 60361 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.073 46.384 356070000 26892000 152730000 176440000 0 0 0 0 0 0 0 0 0 0 0 0 12934 5280 11807 109345;109346;109347;109348;109349 87441;87442;87443;87444;87445;87446 87441 5 ELQEVIQQQNEK Unmodified 1484.7471 0.74708636 3964 Q96R06 SPAG5 Sperm-associated antigen 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 40.667 40.112 2 9.0401E-33 49647 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 227.94 191.39 211420000 0 61563000 0 6627400 7022400 13905000 7985500 12372000 8998200 14720000 18644000 14616000 17478000 14140000 13347000 12935 3964 11808 109350;109351;109352;109353;109354;109355;109356;109357;109358;109359;109360;109361;109362;109363 87447;87448;87449;87450;87451;87452;87453;87454;87455;87456;87457;87458;87459 87450 13 ELQGDGPPSSPTNDPTVK Unmodified 1837.8694 0.86938634 2201 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.004 40.131 2 0.00038474 43722 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.29 43.663 127500000 0 0 0 10311000 8081700 14380000 9879600 8290600 7009100 13481000 11413000 0 17229000 11854000 15574000 12936 2201 11809 109364;109365;109366;109367;109368;109369;109370;109371;109372;109373;109374;109375 87460;87461;87462;87463;87464;87465;87466;87467;87468;87469;87470;87471 87463 12 ELQGFLDGVK Unmodified 1104.5815 0.58152458 3580 Q8WX92 NELFB Negative elongation factor B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.074 73.14 2 0.001504 84529 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 90.657 29.858 201750000 0 0 0 10550000 11673000 22112000 12024000 12198000 11591000 22154000 15757000 16625000 15990000 18186000 32888000 12937 3580 11810 109376;109377;109378;109379;109380;109381;109382;109383;109384;109385;109386;109387 87472;87473;87474;87475;87476;87477;87478;87479;87480;87481;87482;87483;87484;87485;87486 87486 14 ELQGVLR Unmodified 813.47085 0.47085192 2346 Q13835 PKP1 Plakophilin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 38.185 38.213 2 0.021664 42214 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 106.29 36.896 120520000 0 0 0 13972000 3236800 3986000 5167400 77278000 2926200 0 6054200 0 7904800 0 0 12938 2346 11811 109388;109389;109390;109391;109392;109393;109394;109395 87487 87487 1 ELQIDSLLQQEK Unmodified 1442.7617 0.76167379 478 O75330 HMMR Hyaluronan mediated motility receptor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.582 80.643 2 5.5358E-06 92906 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.53 69.107 85832000 0 0 0 2259900 3787400 7217600 6214200 4661700 5797900 10334000 8200400 12293000 5704800 5462900 13899000 12939 478 11812 109396;109397;109398;109399;109400;109401;109402;109403;109404;109405;109406;109407 87488;87489;87490;87491;87492;87493;87494;87495;87496;87497;87498 87491 11 ELQLEYLLGAFESLGK Unmodified 1808.956 0.95601651 2828 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 104.53 99.786 2 0.01289 123263 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 53.252 44.314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12940 2828 11813 109408 87499 87499 1 ELQLIPDQLR Unmodified 1223.6874 0.68738664 4023 Q99567 NUP88 Nuclear pore complex protein Nup88 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.375 80.435 2 7.7198E-10 93433 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 155.07 135.8 353810000 0 0 0 9152100 15325000 26057000 19876000 30990000 24131000 34832000 26043000 41298000 28939000 41706000 55463000 12941 4023 11814 109409;109410;109411;109412;109413;109414;109415;109416;109417;109418;109419;109420 87500;87501;87502;87503;87504;87505;87506;87507;87508;87509;87510;87511;87512 87509 7 ELQLQEVALR Unmodified 1197.6717 0.67173657 5192 Q9Y4B6 VPRBP Protein VPRBP yes yes 0 0 0 By MS/MS 10 0 1 1 55.19 55.814 3 0.028161 62763 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.161 20.307 3408200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3408200 12942 5192 11815 109421 87513 87513 0 ELQNAPDAIPESGVEPPALDTAWVEATRK Unmodified 3103.5462 0.5462083 2232 Q13098 GPS1 COP9 signalosome complex subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 86.912 87.068 3 9.5228E-09 100904 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 39.388 33.293 28388000 0 0 0 0 0 0 0 0 0 7029700 3067600 0 0 0 18291000 12943 2232 11816 109422;109423;109424 87514;87515 87514 2 ELQNEVEK Unmodified 987.48729 0.48728985 3140 Q86U42 PABPN1 Polyadenylate-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 16.85 17.149 2 0.017693 16610 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 65.252 18.826 63051000 0 0 0 13102000 0 0 0 0 0 0 20350000 0 0 0 29599000 12944 3140 11817 109425;109426;109427 87516 87516 1 ELQPPAAGDPQAK Unmodified 1320.6674 0.66737948 2843 Q66K14 TBC1D9B TBC1 domain family member 9B yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 34.668 34.759 2 0.017697 38021 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 43.77 30.503 20262000 0 0 0 0 1565700 0 2369200 0 2842600 5800900 0 0 4586600 3097400 0 12945 2843 11818 109428;109429;109430;109431;109432;109433 87517 87517 1 ELQPQVEGVDNK Unmodified 1354.6729 0.67285879 5292 Q9Y6Q9 NCOA3 Nuclear receptor coactivator 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.827 39.007 2 2.2484E-05 42834 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 121.9 89.578 137650000 0 0 0 9598100 6809400 10490000 10811000 8378900 9451400 13393000 16322000 11727000 11669000 9978200 19019000 12946 5292 11819 109434;109435;109436;109437;109438;109439;109440;109441;109442;109443;109444;109445 87518;87519;87520;87521;87522;87523;87524;87525;87526;87527;87528;87529;87530 87528 13 ELQQAQTTRPESTQIQPQPGFCIK Unmodified 2784.3865 0.38647695 4700 Q9NWS0 PIH1D1 PIH1 domain-containing protein 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 66.072 66.355 3 2.4519E-28 75392 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 97.69 88.357 52879000 0 0 0 0 0 0 0 3481500 3024200 0 7588900 9592200 9316600 7980500 11895000 12947 4700 11820 109446;109447;109448;109449;109450;109451;109452 87531;87532;87533;87534;87535;87536;87537 87531 7 ELQQELQEYEVVTESEK Unmodified 2079.9848 0.98481003 3732 Q96A49 SYAP1 Synapse-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.63 3.62 8 1 21 2 5 2 1 2 2 2 1 2 2 2 1 2 2 2 79.939 78.935 2;3 0 91198 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 303 294.4 1764700000 18284000 1135200000 18079000 8221100 39431000 42007000 30539000 26856000 45943000 87749000 73810000 43333000 24017000 32427000 138770000 12948 3732 11821 109453;109454;109455;109456;109457;109458;109459;109460;109461;109462;109463;109464;109465;109466;109467;109468;109469;109470;109471;109472;109473;109474;109475;109476;109477;109478;109479;109480;109481;109482 87538;87539;87540;87541;87542;87543;87544;87545;87546;87547;87548;87549;87550;87551;87552;87553;87554;87555;87556;87557;87558;87559;87560;87561;87562;87563;87564 87547 22 ELQQQLVDAK Unmodified 1170.6245 0.62445203 4652 Q9NUQ3 TXLNG Gamma-taxilin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 41.592 39.566 2 1.1298E-05 49980 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 149.94 44.369 219880000 12534000 126060000 0 0 0 0 0 0 0 0 23291000 25939000 0 0 32060000 12949 4652 11822 109483;109484;109485;109486;109487;109488;109489 87565;87566;87567;87568;87569;87570;87571;87572 87566 8 ELQREPLTPEEVQSVR Unmodified 1908.9905 0.99050453 2875 Q6FI81 CIAPIN1 Anamorsin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 2 57.712 57.888 3 2.6303E-10 65765 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 91.592 83.043 334000000 0 0 0 11290000 0 42332000 17771000 21714000 19518000 41324000 34533000 30220000 29140000 35807000 50349000 12950 2875 11823 109490;109491;109492;109493;109494;109495;109496;109497;109498;109499;109500;109501 87573;87574;87575;87576;87577;87578;87579;87580;87581;87582;87583;87584;87585;87586;87587 87573 14 ELQRLQAAQK Unmodified 1183.6673 0.6673199 3101 Q7Z4S6 KIF21A Kinesin-like protein KIF21A yes yes 0 0 1 By MS/MS By matching 2 0 2 1 1 23.873 19.372 3 0.0067389 27184 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.028 27.633 271310000 264620000 6688900 0 0 0 0 0 0 0 0 0 0 0 0 0 12951 3101 11824 109502;109503 87588 87588 1 ELQRQASPNIVIALAGNK Unmodified 1921.0745 0.074508932 1646 P51148 RAB5C Ras-related protein Rab-5C yes yes 0 0 1 By MS/MS 2 0 1 1 82.939 74.808 3 0.00020198 97818 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.314 45.336 16283000 16283000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12952 1646 11825 109504 87589 87589 1 ELQRSFMALSQDIQK Unmodified 1792.9142 0.91416847 2407 Q14444 CAPRIN1 Caprin-1 yes yes 0 0 1 By MS/MS 2 0 1 1 81.791 73.66 3 2.382E-05 96433 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 99.069 85.921 58630000 58630000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12953 2407 11826 109505 87590 87590 1 ELQSAVPR Unmodified 898.48723 0.48723027 2354 Q13895 BYSL Bystin yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 26.578 26.749 2 0.015934 28750 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 68.081 25.034 37867000 0 0 0 2181600 3507100 0 3409700 3640200 3848000 3260700 4513100 0 4058300 5086400 4362300 12954 2354 11827 109506;109507;109508;109509;109510;109511;109512;109513;109514;109515 87591 87591 1 ELQSAVPRDVEDVPITVE Unmodified 1995.0161 0.01605058 2354 Q13895 BYSL Bystin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 80.649 80.752 2 7.252E-29 93106 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 117.2 102.64 72489000 0 0 0 0 6014700 5949300 3433400 5432000 4970500 6403100 7643700 8416800 6617100 6441200 11167000 12955 2354 11828 109516;109517;109518;109519;109520;109521;109522;109523;109524;109525;109526 87592;87593;87594;87595;87596;87597;87598 87594 7 ELQSDFLR Unmodified 1006.5084 0.50835964 4904 Q9UHL9 GTF2IRD1 General transcription factor II-I repeat domain-containing protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 56.302 56.495 2 0.027721 64300 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 57.177 32.504 14417000 0 0 0 0 0 0 0 0 0 4796500 0 0 5275500 4344900 0 12956 4904 11829 109527;109528;109529 87599;87600 87600 2 ELQSINQK Unmodified 958.50836 0.50835964 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS 2 0 1 1 17.938 14.518 2 0.012142 19093 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.77 44.962 21138000 0 21138000 0 0 0 0 0 0 0 0 0 0 0 0 0 12957 5049 11830 109530 87601 87601 1 ELQSLLVEER Unmodified 1214.6507 0.65066678 1370 P36404 ARL2 ADP-ribosylation factor-like protein 2 yes yes 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 67.103 67.118 2 0.043367 77375 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 39.001 6.1889 50309000 0 0 0 3145600 2703200 5411000 4419900 4044300 3569100 7267700 0 10856000 4247200 4645700 0 12958 1370 11831 109531;109532;109533;109534;109535;109536;109537;109538;109539;109540 87602 87602 1 ELQSQIQEAR Unmodified 1200.6099 0.6098646 4830 Q9P2X0 DPM3 Dolichol-phosphate mannosyltransferase subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.037 30.275 2 0.00058764 31660 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 130.75 60.749 84165000 0 0 0 0 6120900 5868100 6390400 6356100 5188800 7153300 8668900 12481000 8556500 7533100 9847900 12959 4830 11832 109541;109542;109543;109544;109545;109546;109547;109548;109549;109550;109551;109552 87603;87604;87605;87606;87607;87608;87609;87610;87611;87612;87613;87614 87605 12 ELQSQISDTSVVLSMDNSR Oxidation (M) 2124.0005 0.0004768701 67;51 CON__H-INV:HIT000292931;CON__P05787;P05787 KRT8 Keratin, type II cytoskeletal 8 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.176 69.254 2 5.7944E-65 79417 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 161.04 136.19 + 112370000 0 0 0 5137400 5796200 10621000 10198000 6125500 6445500 8946100 10811000 20030000 9096600 8229400 10934000 12960 51;67 11833 109553;109554;109555;109556;109557;109558;109559;109560;109561;109562;109563;109564 87615;87616;87617;87618;87619;87620;87621;87622;87623;87624;87625 87623 45 11 ELQSSSEQNTFLINK Unmodified 1736.8581 0.85809337 5224 Q9Y592 CEP83 Centrosomal protein of 83 kDa yes yes 0 0 0 By MS/MS 2 0 1 1 65.489 59.571 2 0.014038 76302 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 53.567 37.677 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12961 5224 11834 109565 87626 87626 1 ELQSTFK Unmodified 851.43888 0.43888309 3770 Q96C19 EFHD2 EF-hand domain-containing protein D2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.43 3.02 1 2 11 1 2 1 1 1 1 1 1 1 1 1 1 1 26.743 25.891 2 0.025219 33027 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.74 42.19 1084900000 1444900 842440000 0 13600000 11012000 18676000 17555000 17027000 8874300 32061000 32029000 38802000 23607000 27795000 0 12962 3770 11835 109566;109567;109568;109569;109570;109571;109572;109573;109574;109575;109576;109577;109578;109579 87627;87628 87627 2 ELQSVEQEVR Unmodified 1215.6095 0.60953025 3730 Q969Z0 TBRG4 Protein TBRG4 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 39.627 39.616 2 0.00054132 44237 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 127.68 58.481 90113000 0 0 0 9174700 10838000 11199000 11293000 9171900 9613900 15132000 0 0 13691000 0 0 12963 3730 11836 109580;109581;109582;109583;109584;109585;109586;109587;109588;109589 87629;87630;87631;87632;87633;87634;87635 87629 6 ELQSVKPQEAPK Unmodified 1352.73 0.72997974 3686 Q92917 GPKOW G patch domain and KOW motifs-containing protein yes yes 0 0 1 By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.932 24.137 2 0.00045292 26027 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 123.75 84.444 108150000 0 0 0 5444900 5077200 5480900 6605100 6027700 5513900 8633500 8477800 12147000 7989200 7836100 28921000 12964 3686 11837 109590;109591;109592;109593;109594;109595;109596;109597;109598;109599;109600;109601 87636;87637;87638;87639;87640;87641;87642 87642 2 ELQTLHNLRK Unmodified 1250.7095 0.70951906 1328 P33176;O60282;Q12840 KIF5B;KIF5C;KIF5A Kinesin-1 heavy chain;Kinesin heavy chain isoform 5C;Kinesin heavy chain isoform 5A yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 28.113 27.796 3 0.0067731 29515 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 40.589 13.108 374910000 8258600 0 0 20398000 12436000 46414000 20033000 19177000 25968000 33101000 36505000 49523000 22730000 17101000 63267000 12965 1328 11838 109602;109603;109604;109605;109606;109607;109608;109609;109610;109611;109612;109613;109614 87643;87644;87645;87646;87647;87648;87649 87643 4 ELQTQYDALK Unmodified 1207.6085 0.60846762 3639 Q92614 MYO18A Unconventional myosin-XVIIIa yes yes 0 0 0 By MS/MS 2 0 1 1 50.646 44.9 2 0.0012793 58269 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 111.74 59.885 28542000 0 28542000 0 0 0 0 0 0 0 0 0 0 0 0 0 12966 3639 11839 109615 87650;87651 87650 2 ELQYIDAISNK Unmodified 1292.6612 0.66123147 5070 Q9UQB8 BAIAP2 Brain-specific angiogenesis inhibitor 1-associated protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 71.9 66.173 2 0.0081459 83904 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.807 24.128 36491000 0 36491000 0 0 0 0 0 0 0 0 0 0 0 0 0 12967 5070 11840 109616 87652 87652 1 ELQYLQGHLVSSDLSPR Unmodified 1940.9956 0.99558991 4641 Q9NU22 MDN1 Midasin yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching 10 0 7 1 1 1 1 1 1 1 74.62 74.82 3 8.6016E-05 86343 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 72.11 58.168 35184000 0 0 0 0 0 0 0 4548800 3096000 6229100 3480600 5228300 0 4929600 7671400 12968 4641 11841 109617;109618;109619;109620;109621;109622;109623 87653 87653 1 ELRAYQQSEAYK Unmodified 1484.726 0.72595699 4800 Q9P0W2 HMG20B SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related yes yes 0 0 1 By MS/MS 2 0 1 1 32.175 28.903 3 4.305E-06 36560 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 89.805 79.451 22269000 0 0 22269000 0 0 0 0 0 0 0 0 0 0 0 0 12969 4800 11842 109624 87654;87655 87654 2 ELRDEEQTAESIK Unmodified 1546.7475 0.74748029 2415 Q14566 MCM6 DNA replication licensing factor MCM6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.1 3.37 6 1 22 2 3 2 2 1 2 2 2 1 2 2 2 2 2 2 34.037 33.018 2;3 1.071E-29 42395 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 179.67 120.97 1420200000 136720000 642310000 39777000 33435000 15318000 36506000 33570000 32471000 19139000 43131000 83209000 85166000 37689000 54877000 126840000 12970 2415 11843 109625;109626;109627;109628;109629;109630;109631;109632;109633;109634;109635;109636;109637;109638;109639;109640;109641;109642;109643;109644;109645;109646;109647;109648;109649;109650;109651;109652;109653 87656;87657;87658;87659;87660;87661;87662;87663;87664;87665;87666;87667;87668;87669;87670 87658 13 ELRDQIVSVQEEK Unmodified 1571.8155 0.81550028 6 A0MZ66 KIAA1598 Shootin-1 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.06 3.8 5 1 10 1 2 3 1 1 1 1 1 1 1 1 1 1 47.963 46.213 2;3 8.9353E-08 61042 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.98 82.19 254840000 4358700 35921000 81659000 6887400 0 14011000 0 9232000 9358800 9782700 18029000 16051000 8347000 16010000 25190000 12971 6 11844 109654;109655;109656;109657;109658;109659;109660;109661;109662;109663;109664;109665;109666;109667;109668;109669 87671;87672;87673;87674;87675;87676;87677;87678;87679;87680;87681;87682;87683;87684;87685 87673 10 ELRDSSIDTHQYHEGLSK Unmodified 2114.0029 0.0028601316 3037 Q76L83 ASXL2 Putative Polycomb group protein ASXL2 yes yes 0 0 1 By matching By matching By MS/MS 10 0 3 1 1 1 35.284 35.439 4 0.042436 39171 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 27.333 23.671 21894000 0 0 0 0 0 6072400 0 0 6059800 0 0 0 9761300 0 0 12972 3037 11845 109670;109671;109672 87686 87686 0 ELREEEEK Unmodified 1060.5037 0.50366819 3936 Q96NC0 ZMAT2 Zinc finger matrin-type protein 2 yes yes 0 0 1 By matching By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 7.4216 4.337 2 0.033604 6294 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 106.36 26.888 38810000 8211600 25793000 4804800 0 0 0 0 0 0 0 0 0 0 0 0 12973 3936 11846 109673;109674;109675;109676 87687;87688 87688 0 ELRELQDEK Unmodified 1158.5881 0.58806652 3998 Q96T51 RUFY1 RUN and FYVE domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 20.64 20.695 3 0.032301 20079 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.424 14.679 61893000 0 0 0 6190000 7782400 7349600 9696700 13046000 0 0 0 0 0 0 17829000 12974 3998 11847 109677;109678;109679;109680;109681;109682 87689 87689 1 ELRENTQTTIK Unmodified 1331.7045 0.70449327 1868 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.34 3.69 9 3 23 3 4 5 2 2 2 2 2 2 2 2 1 2 2 2 19.949 18.881 2;3 7.2727E-14 17815 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 169.37 121.77 8665200000 539540000 2209300000 2990900000 151620000 93971000 305180000 171430000 155190000 144520000 338920000 278160000 263660000 219150000 221410000 582220000 12975 1868 11848 109683;109684;109685;109686;109687;109688;109689;109690;109691;109692;109693;109694;109695;109696;109697;109698;109699;109700;109701;109702;109703;109704;109705;109706;109707;109708;109709;109710;109711;109712;109713;109714;109715;109716;109717 87690;87691;87692;87693;87694;87695;87696;87697;87698;87699;87700;87701;87702;87703;87704;87705;87706;87707;87708;87709;87710;87711;87712;87713;87714 87698 12 ELRNQTPAPSAAQTSAPSK Unmodified 1952.9916 0.99156716 4808 Q9P265 DIP2B Disco-interacting protein 2 homolog B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 29.732 26.578 3 0.0088464 33558 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 35.748 25.998 17068000 0 0 17068000 0 0 0 0 0 0 0 0 0 0 0 0 12976 4808 11849 109718;109719;109720 87715;87716;87717 87717 3 ELRNVLLNNSEK Unmodified 1427.7732 0.77324153 2168 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 46.782 47.143 3 0.0020163 52980 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 46.88 31.335 53848000 0 0 0 0 0 0 5615100 6120800 0 7813600 8339900 6824700 5997000 5312900 7823900 12977 2168 11850 109721;109722;109723;109724;109725;109726;109727;109728;109729 87718;87719;87720;87721;87722;87723;87724;87725;87726;87727 87719 10 ELRQELMQVHGEK Oxidation (M) 1611.8039 0.80388973 2155 Q08378 GOLGA3 Golgin subfamily A member 3 yes yes 0 1 1 By MS/MS 2 0 1 1 40.453 33.831 3 0.022087 46932 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.405 29.551 9443800 9443800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12978 2155 11851 109730 87728 87728 1 ELRQFVPGDEPREK Unmodified 1698.8689 0.86893283 888 P09543 CNP 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes yes 0 0 2 By MS/MS 2 0 1 1 51.069 43.108 4 0.013957 59605 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 39.509 27.089 7867900 7867900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12979 888 11852 109731 87729 87729 1 ELSAALQDK Unmodified 973.50803 0.50802529 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching 6.25 3.77 1 1 2 2 1 1 34.171 31.623 2 0.009002 35726 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 67.993 32.637 147490000 0 138790000 0 3788300 4909600 0 0 0 0 0 0 0 0 0 0 12980 2459 11853 109732;109733;109734;109735 87730;87731 87731 2 ELSAEELYK Unmodified 1080.5339 0.53390569 329 O43432 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By matching 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 52.59 52.277 2 0.020014 66201 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.761 41.359 161870000 0 21541000 0 5779900 8130900 8845900 10183000 6804600 12661000 12566000 13075000 17863000 15004000 12084000 17329000 12981 329 11854 109736;109737;109738;109739;109740;109741;109742;109743;109744;109745;109746;109747;109748 87732;87733;87734 87733 3 ELSALVK Unmodified 758.4538 0.45380487 5131 Q9Y2Z0 SUGT1 Suppressor of G2 allele of SKP1 homolog yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 40.933 40.688 1;2 0.028147 44829 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.847 19.383 371810000 0 84657000 0 20224000 11796000 21824000 19326000 32348000 11707000 27542000 30596000 32070000 25689000 4440700 49589000 12982 5131 11855 109749;109750;109751;109752;109753;109754;109755;109756;109757;109758;109759;109760;109761 87735;87736 87736 1 ELSANTAAFAK Unmodified 1121.5717 0.57168818 428 O60749 SNX2 Sorting nexin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.28 3.23 3 1 14 1 2 1 1 1 1 1 2 1 1 3 1 1 1 45.592 44.171 2 0.00022128 49940 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 106.6 53.045 819620000 18818000 632660000 4909200 12673000 0 16210000 8514600 12232000 0 15408000 13542000 31798000 12521000 12155000 28174000 12983 428 11856 109762;109763;109764;109765;109766;109767;109768;109769;109770;109771;109772;109773;109774;109775;109776;109777;109778;109779 87737;87738;87739;87740;87741;87742;87743;87744;87745;87746;87747;87748;87749;87750;87751;87752;87753;87754;87755;87756;87757;87758 87739 21 ELSAVTFPDIIR Unmodified 1359.7398 0.73981614 1448 P42224 STAT1 Signal transducer and activator of transcription 1-alpha/beta yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 87.634 87.738 2 0.00025852 101739 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 96.89 74.15 44964000 0 0 0 0 2432600 7746000 3114100 3415000 2557300 10099000 6619400 6133000 2848500 0 0 12984 1448 11857 109780;109781;109782;109783;109784;109785;109786;109787;109788;109789;109790 87759;87760;87761;87762;87763;87764;87765;87766 87760 8 ELSCQAPLNK Unmodified 1158.5703 0.57030797 4551 Q9NPG3 UBN1 Ubinuclein-1 yes yes 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 30.95 30.983 2 0.027961 34103 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 43.808 26.295 6199900 0 0 0 0 1985700 0 2573700 0 0 0 1640500 0 0 0 0 12985 4551 11858 109791;109792;109793 87767 87767 1 ELSDAAELDLK Unmodified 1202.603 0.60304789 5308 yes yes 0 0 0 By MS/MS 2 0 1 1 17.346 13.137 3 0.0039226 18926 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.108 1.1095 + 159580000 159580000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12986 5308 11859 109794 87768 87768 1 ELSDFISYLQR Unmodified 1369.6878 0.68778057 1270 P30101 PDIA3 Protein disulfide-isomerase A3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 89.094 89.205 2 0.0016106 103516 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 84.213 47.879 74259000 0 0 0 0 1255800 2154700 1137800 2032600 1923800 4642500 7931100 4131900 0 5383500 43665000 12987 1270 11860 109795;109796;109797;109798;109799;109800;109801;109802;109803;109804 87769;87770;87771;87772;87773;87774 87771 6 ELSDFLR Unmodified 878.44978 0.44978213 5280 Q9Y6E2 BZW2 Basic leucine zipper and W2 domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.866 66.949 2 0.015408 76198 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 118.01 56.014 845560000 0 0 0 41866000 48256000 76385000 54268000 50672000 44860000 85396000 92488000 89259000 70744000 70333000 121040000 12988 5280 11861 109805;109806;109807;109808;109809;109810;109811;109812;109813;109814;109815;109816 87775;87776;87777;87778;87779;87780;87781;87782 87782 7 ELSDIAHR Unmodified 939.47739 0.47739386 771 P04075 ALDOA Fructose-bisphosphate aldolase A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22.856 22.439 2 0.0045796 22867 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 110.14 66.328 851050000 0 46852000 71756000 32717000 15774000 25600000 30135000 23207000 20387000 37968000 202940000 188610000 35042000 120060000 0 12989 771 11862 109817;109818;109819;109820;109821;109822;109823;109824;109825;109826;109827;109828;109829;109830 87783;87784;87785;87786;87787;87788;87789;87790;87791;87792;87793;87794;87795;87796 87788 13 ELSDIAHRIVAPGK Unmodified 1504.8362 0.83617614 771 P04075 ALDOA Fructose-bisphosphate aldolase A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 2 3 1 69.31 63.194 2;3 1.3347E-06 81094 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.83 86.714 666470000 470110000 194020000 2343300 0 0 0 0 0 0 0 0 0 0 0 0 12990 771 11863 109831;109832;109833;109834;109835;109836 87797;87798;87799;87800;87801 87798 4 ELSDIALRIVAPGK Unmodified 1480.8613 0.86132826 897 P09972 ALDOC Fructose-bisphosphate aldolase C yes yes 0 0 1 By MS/MS 2 0 1 1 87.817 79.686 3 0.010216 103805 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.069 28.858 6180300 6180300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12991 897 11864 109837 87802;87803 87803 2 ELSDLEEENRVLK Unmodified 1572.7995 0.79951586 2746 Q5M775 SPECC1 Cytospin-B yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 63.443 56.357 3 0.020562 75536 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.789 22.362 22865000 5557200 17308000 0 0 0 0 0 0 0 0 0 0 0 0 0 12992 2746 11865 109838;109839 87804;87805 87805 1 ELSDLESAR Unmodified 1018.4931 0.49310351 1224 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 35.02 35.206 2 0.0052023 39091 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 80.438 42.793 141060000 0 0 0 9207700 5416600 13922000 9395400 9068700 0 14024000 15273000 19665000 13940000 10706000 20438000 12993 1224 11866 109840;109841;109842;109843;109844;109845;109846;109847;109848;109849;109850 87806;87807;87808;87809;87810;87811;87812;87813 87813 8 ELSDPAGAIIYTSR Unmodified 1491.7569 0.75692277 248 O15067 PFAS Phosphoribosylformylglycinamidine synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 72.646 73.016 2 2.9202E-05 83514 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.04 81.725 29004000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29004000 12994 248 11867 109851;109852;109853 87814;87815;87816 87814 3 ELSDQATASPIVAR Unmodified 1456.7522 0.75217174 2734 Q5JSH3 WDR44 WD repeat-containing protein 44 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 49.969 49.262 2 2.6605E-29 61566 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.49 99.932 383020000 0 117070000 0 0 12575000 12442000 15114000 18438000 15765000 21440000 42939000 41114000 0 33899000 52226000 12995 2734 11868 109854;109855;109856;109857;109858;109859;109860;109861;109862;109863;109864;109865 87817;87818;87819;87820;87821;87822;87823;87824;87825 87819 9 ELSDSVTLSSSDR Unmodified 1394.6525 0.65251728 533 O75694 NUP155 Nuclear pore complex protein Nup155 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 45.092 45.279 2 0.00066549 50562 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 94.363 68.258 102900000 0 0 0 0 7061000 9582400 8096700 8883100 7086700 11902000 14490000 14538000 10233000 11022000 0 12996 533 11869 109866;109867;109868;109869;109870;109871;109872;109873;109874;109875 87826;87827;87828;87829;87830;87831;87832;87833;87834;87835;87836 87830 10 ELSDSVTLSSSDRMHALSLK Oxidation (M) 2191.0791 0.079061542 533 O75694 NUP155 Nuclear pore complex protein Nup155 yes yes 0 1 1 By MS/MS 2 0 1 1 70.22 61.934 3 0.0019407 82516 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.968 31.921 8075800 8075800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12997 533 11870 109876 87837 87837 695 1 ELSDSVTLSSSDRMHALSLK Unmodified 2175.0841 0.08414692 533 O75694 NUP155 Nuclear pore complex protein Nup155 yes yes 0 0 1 By MS/MS 2 0 1 1 77.694 69.564 4 0.027616 91557 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 20.625 5.6969 14047000 14047000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12998 533 11870 109877 87838 87838 1 ELSEALTR Unmodified 917.48181 0.48181054 1440 P41250 GARS Glycine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.589 33.774 2 0.0057994 35886 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 126.28 36.909 269030000 0 0 0 11298000 9541200 13874000 12090000 10812000 7385900 20619000 32596000 42278000 22993000 30294000 55249000 12999 1440 11871 109878;109879;109880;109881;109882;109883;109884;109885;109886;109887;109888;109889 87839 87839 0 ELSEALTRHGVSHK Unmodified 1562.8165 0.81650333 1440 P41250 GARS Glycine--tRNA ligase yes yes 0 0 1 By MS/MS 2 0 1 1 35.187 28.839 3 0.020687 40352 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.915 25.03 13907000 13907000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13000 1440 11872 109890 87840 87840 0 ELSEITTAEAEPVVPR Unmodified 1739.8941 0.89414453 3629 Q92574 TSC1 Hamartin yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 72.239 72.257 2 1.6167E-10 83273 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 119.45 96.213 18660000 0 0 0 0 2279400 3618000 2035700 0 0 4291400 0 0 3245000 3190100 0 13001 3629 11873 109891;109892;109893;109894;109895;109896 87841;87842;87843;87844;87845 87841 5 ELSELIEQLQK Unmodified 1328.7187 0.71874635 399 O60437 PPL Periplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.71 3.81 2 1 4 2 1 1 1 1 1 62.372 60.962 2;3 0.00084653 99967 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 113.71 72.825 65163000 0 43569000 1098500 1648000 0 0 0 5112000 3692600 0 0 10043000 0 0 0 13002 399 11874 109897;109898;109899;109900;109901;109902;109903 87846;87847;87848;87849 87848 4 ELSEMRAPPAATNSSK Unmodified 1687.8199 0.81993373 1053 P17480 UBTF Nucleolar transcription factor 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 34.842 35.002 3 0.015473 38326 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 41.188 29.917 77227000 0 0 0 8097600 0 0 8970800 8694600 0 16024000 0 24484000 0 10956000 0 13003 1053 11875 109904;109905;109906;109907;109908;109909 87850;87851 87850 1 ELSENINAVTLMK Unmodified 1460.7545 0.75447993 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By MS/MS 2 0 1 1 80.535 75.823 2 0.018006 94383 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.346 47.6 67272000 0 67272000 0 0 0 0 0 0 0 0 0 0 0 0 0 13004 2291 11876 109910 87852 87852 1 ELSENINAVTLMK Oxidation (M) 1476.7494 0.74939455 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 64.358 64.334 2 0.0035774 73396 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 48.981 24.892 35549000 0 0 0 2825200 4117600 4560500 4845600 0 4233900 4475600 0 6709300 3781500 0 0 13005 2291 11876 109911;109912;109913;109914;109915;109916;109917;109918;109919 87853;87854;87855 87854 3747 2 ELSEPSSTR Unmodified 1004.4775 0.47745344 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.735 14.905 2 0.0035825 13687 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 109.11 44.352 155860000 0 0 0 7189100 4930200 9566300 9439300 6828400 8345200 10689000 18312000 17347000 12689000 14363000 36157000 13006 1300 11877 109920;109921;109922;109923;109924;109925;109926;109927;109928;109929;109930;109931 87856;87857;87858;87859;87860;87861;87862;87863;87864;87865;87866 87859 11 ELSEPSSTRIYAIAK Unmodified 1663.8781 0.87810054 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 65.254 59.225 3 0.0025241 73647 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 77.527 51.397 81922000 48962000 0 32960000 0 0 0 0 0 0 0 0 0 0 0 0 13007 1300 11878 109932;109933 87867;87868 87868 1 ELSEQIQR Unmodified 1001.5142 0.5141733 1017 P15311 EZR Ezrin yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 24.942 25.44 2 0.034409 26155 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 97.473 50.809 166450000 0 0 0 0 0 0 0 0 0 0 0 0 0 40502000 125950000 13008 1017 11879 109934;109935 87869 87869 0 ELSEQLGQAER Unmodified 1258.6153 0.61534391 1802 P58107 EPPK1 Epiplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 2 1 1 2 2 1 1 1 1 2 1 1 36.507 36.649 2 0.00032991 40682 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 116.3 68.021 102960000 0 0 0 12456000 5478100 6681700 9434100 11855000 4451500 5043400 5451700 15567000 11261000 4509200 10770000 13009 1802 11880 109936;109937;109938;109939;109940;109941;109942;109943;109944;109945;109946;109947;109948;109949;109950;109951 87870;87871;87872;87873;87874;87875;87876;87877;87878;87879;87880 87876 11 ELSESVQQQSTPVPLISPK Unmodified 2066.0895 0.089549874 5005 Q9ULU4 ZMYND8 Protein kinase C-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.95 2.57 1 2 18 3 2 2 1 2 1 1 2 1 1 1 2 2 76.565 76.045 2;3 9.0498E-12 88287 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 98.531 90.62 139100000 0 46422000 0 5179300 9260100 3755100 9729500 5080600 2924800 12588000 6865600 7418800 5134900 10098000 14648000 13010 5005 11881 109952;109953;109954;109955;109956;109957;109958;109959;109960;109961;109962;109963;109964;109965;109966;109967;109968;109969;109970;109971;109972 87881;87882;87883;87884;87885;87886;87887;87888;87889;87890 87887 10 ELSEYVR Unmodified 894.4447 0.44469675 3043 Q7L1Q6 BZW1 Basic leucine zipper and W2 domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 1 1 1 1 1 1 2 2 1 2 2 35.375 35.652 2 0.0174 39952 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 114.02 65.849 1325300000 0 0 0 69040000 72032000 93941000 81485000 74506000 69381000 81784000 169090000 158700000 124850000 130000000 200520000 13011 3043 11882 109973;109974;109975;109976;109977;109978;109979;109980;109981;109982;109983;109984;109985;109986;109987;109988 87891;87892;87893;87894;87895;87896;87897;87898;87899;87900;87901;87902;87903 87903 12 ELSEYVRNQQTIGARK Unmodified 1890.9912 0.99117323 3043 Q7L1Q6 BZW1 Basic leucine zipper and W2 domain-containing protein 1 yes yes 0 0 2 By MS/MS 2 0 2 2 48.973 41.148 3;4 0.0010154 57023 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.022 56.278 24339000 24339000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13012 3043 11883 109989;109990 87904;87905 87904 2 ELSGLGSALK Unmodified 973.54441 0.5444108 1591 P49748 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.24 2 1 10 2 1 1 1 1 1 1 1 1 1 1 1 55.651 54.549 2 0.0060298 60801 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 66.568 5.8858 290760000 0 109250000 2322800 0 0 15817000 22912000 23564000 10556000 24982000 35734000 24685000 0 0 20944000 13013 1591 11884 109991;109992;109993;109994;109995;109996;109997;109998;109999;110000;110001;110002;110003 87906;87907;87908;87909;87910;87911;87912;87913;87914;87915;87916 87916 11 ELSGSPLFEMIK Oxidation (M) 1365.685 0.68500338 5322 yes yes 0 1 0 By MS/MS 2 0 1 1 92.191 84.06 2 0.016455 108935 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.908 15.025 + 7431100 7431100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13014 5322 11885 110004 87917 87917 6718 1 ELSHATIDSK Unmodified 1099.551 0.55095274 5085 Q9Y263 PLAA Phospholipase A-2-activating protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 15.951 15.187 2 7.5544E-08 14290 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 152.06 116.71 219680000 19144000 126670000 7789900 3436400 1497400 4781500 4973100 3477000 3172500 6592900 6733600 4826100 7859500 5856800 12875000 13015 5085 11886 110005;110006;110007;110008;110009;110010;110011;110012;110013;110014;110015;110016;110017;110018;110019;110020 87918;87919;87920;87921;87922;87923;87924;87925;87926;87927;87928;87929;87930 87926 13 ELSIAIR Unmodified 800.4756 0.47560295 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 56.282 56.525 2 0.023371 63025 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 88.734 10.986 358350000 0 0 0 0 0 134060000 0 0 75407000 118740000 0 30143000 0 0 0 13016 1986 11887 110021;110022;110023;110024 87931;87932;87933;87934 87934 4 ELSIHSCEVK Unmodified 1200.5809 0.58087266 4266 Q9BZH6 WDR11 WD repeat-containing protein 11 yes yes 0 0 0 By MS/MS 2 0 1 1 35.271 31.927 2 0.0075469 40411 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 68.224 49.784 2691300 0 0 2691300 0 0 0 0 0 0 0 0 0 0 0 0 13017 4266 11888 110025 87935 87935 1 ELSLAGNELGDEGAR Unmodified 1529.7322 0.73216458 979 P13489 RNH1 Ribonuclease inhibitor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.339 62.437 2 2.0565E-07 71476 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 115.33 102.24 360230000 0 0 0 18498000 12513000 44566000 20025000 20018000 10226000 30975000 35788000 40693000 28174000 30503000 68248000 13018 979 11889 110026;110027;110028;110029;110030;110031;110032;110033;110034;110035;110036;110037 87936;87937;87938;87939;87940;87941;87942;87943;87944;87945;87946;87947;87948 87945 13 ELSLAGNELGDEGARLLCETLLEPGCQLESLWVK Unmodified 3798.8808 0.88082601 979 P13489 RNH1 Ribonuclease inhibitor yes yes 0 0 1 By MS/MS 2 0 1 1 102.1 93.965 3 4.4248E-34 120882 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.145 79.971 23742000 23742000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13019 979 11890 110038 87949 87949 1 ELSLDDPEVEQVSGR Unmodified 1671.7952 0.79515877 4144 Q9BTE6 AARSD1 Alanyl-tRNA editing protein Aarsd1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 69.173 69.499 2 5.9215E-05 79118 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.011 59.782 19081000 0 0 0 0 0 0 0 0 0 0 0 0 0 6307600 12773000 13020 4144 11891 110039;110040 87950;87951 87950 2 ELSLTPITGAK Unmodified 1128.639 0.63903946 690 O95785 WIZ Protein Wiz yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.565 67.647 2 0.00031555 77521 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 101.65 63.513 212900000 0 0 0 18195000 14673000 17245000 15788000 17713000 10307000 19607000 17051000 24204000 14168000 19114000 24838000 13021 690 11892 110041;110042;110043;110044;110045;110046;110047;110048;110049;110050;110051;110052 87952;87953;87954;87955;87956;87957;87958;87959;87960;87961 87953 8 ELSNHNERVEER Unmodified 1510.7124 0.71243219 3094;456 Q7Z460;O75122 CLASP1;CLASP2 CLIP-associating protein 1;CLIP-associating protein 2 no no 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 8.4914 8.6065 3 0.01344 5528 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 40.725 15.547 28052000 0 0 0 0 2571600 2567000 1847800 0 2880700 0 0 8033700 0 4449900 5701100 13022 3094;456 11893 110053;110054;110055;110056;110057;110058;110059 87962;87963 87962 2 ELSNHNERVEERK Unmodified 1638.8074 0.80739521 3094;456 Q7Z460;O75122 CLASP1;CLASP2 CLIP-associating protein 1;CLIP-associating protein 2 no no 0 0 2 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 23 2 1 2 2 2 2 2 2 2 2 2 2 6.5554 6.6905 3;4 0.0009649 4071 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.202 60.571 297390000 0 0 0 9403500 5426300 21672000 19980000 27442000 24448000 26237000 26720000 29849000 30955000 31359000 43899000 13023 3094;456 11894 110060;110061;110062;110063;110064;110065;110066;110067;110068;110069;110070;110071;110072;110073;110074;110075;110076;110077;110078;110079;110080;110081;110082 87964;87965;87966;87967 87965 3 ELSNSVSTYRPFGLGSESPYK Unmodified 2317.1226 0.12264092 2810 Q5VT52 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.533 75.592 3 2.7593E-59 86876 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 130.05 106.49 313540000 0 0 0 2876300 8037300 25661000 8159300 23917000 27021000 34991000 24680000 37404000 17948000 27922000 74920000 13024 2810 11895 110083;110084;110085;110086;110087;110088;110089;110090;110091;110092;110093;110094 87968;87969;87970;87971;87972;87973;87974;87975;87976;87977;87978;87979;87980;87981;87982;87983 87973 16 ELSPAGSISK Unmodified 987.52368 0.52367535 662 O95453 PARN Poly(A)-specific ribonuclease PARN yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 30.767 30.924 2 0.011165 32294 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 54.722 9.9555 28742000 0 0 0 0 3667600 0 4840900 0 3860300 0 0 0 0 6332600 10040000 13025 662 11896 110095;110096;110097;110098;110099;110100 87984;87985;87986;87987 87985 4 ELSPDIAHLASLK Unmodified 1392.7613 0.76127986 3314 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.892 76.952 3 0.0025666 88901 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 47.774 36.868 65581000 0 0 0 1051400 1336900 5955400 2698300 4182600 2176100 7866100 6427500 7356500 3714600 7699700 15116000 13026 3314 11897 110101;110102;110103;110104;110105;110106;110107;110108;110109;110110;110111;110112 87988;87989;87990;87991;87992;87993;87994 87994 7 ELSPPPGLPSK Unmodified 1120.6128 0.61282471 3101 Q7Z4S6 KIF21A Kinesin-like protein KIF21A yes yes 0 0 0 By MS/MS 2 0 1 1 58.902 53.059 2 0.023489 68464 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.827 50.225 75302000 0 75302000 0 0 0 0 0 0 0 0 0 0 0 0 0 13027 3101 11898 110113 87995 87995 0 ELSPQLER Unmodified 970.50836 0.50835964 3575 Q8WWL2 SPIRE2 Protein spire homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching 10 0 4 1 1 1 1 58.251 58.234 2 0.03661 66947 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 51.787 16.492 17289000 0 0 0 0 2333800 0 3327900 0 0 4943600 0 0 0 6683900 0 13028 3575 11899 110114;110115;110116;110117 87996 87996 1 ELSPVLTSEVHSVR Unmodified 1551.8257 0.82567103 4672 Q9NVM9 ASUN Protein asunder homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 2 1 1 1 2 2 1 1 1 1 62.469 62.578 2;3 0.0007495 71196 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.414 53.243 168980000 0 0 0 6053400 5675300 14570000 9373000 14614000 7466300 19290000 19614000 17244000 13205000 15848000 26025000 13029 4672 11900 110118;110119;110120;110121;110122;110123;110124;110125;110126;110127;110128;110129;110130;110131;110132 87997;87998;87999;88000;88001;88002;88003;88004;88005;88006;88007;88008;88009;88010;88011 88008 15 ELSQDSTGR Unmodified 991.45705 0.45705235 1701 P52788 SMS Spermine synthase yes yes 0 0 0 By MS/MS 10 0 1 1 7.1168 7.4512 2 0.0034522 4845 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.302 74.825 7497300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7497300 13030 1701 11901 110133 88012 88012 1 ELSQDSTGRVK Unmodified 1218.6204 0.62042929 1701 P52788 SMS Spermine synthase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 6 2 2 4 2 13.7 10.422 2;3 1.7122E-11 12982 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 161.27 119.16 1433900000 176620000 1188200000 69160000 0 0 0 0 0 0 0 0 0 0 0 0 13031 1701 11902 110134;110135;110136;110137;110138;110139;110140;110141 88013;88014;88015;88016;88017;88018;88019;88020 88017 6 ELSQIEACQGPMQMR Unmodified 1776.7957 0.79570959 3946 Q96P70 IPO9 Importin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 63.645 63.862 2 5.468E-20 72391 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 145.46 124.06 17565000 0 0 0 0 0 4355000 0 0 0 2285800 0 0 0 2650200 8273900 13032 3946 11903 110142;110143;110144;110145 88021;88022;88023;88024;88025 88023 4 ELSQIEAELNK Unmodified 1272.6561 0.65614609 2756 Q5SRE5 NUP188 Nucleoporin NUP188 homolog yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 64.221 64.306 2 0.00026373 73331 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 91.867 60.445 107820000 0 0 0 3749300 4181500 3290000 3937700 5539500 0 5240400 13805000 15577000 5341000 11251000 35903000 13033 2756 11904 110146;110147;110148;110149;110150;110151;110152;110153;110154;110155;110156 88026;88027;88028;88029;88030;88031;88032;88033;88034;88035;88036 88034 11 ELSQLQAAQEK Unmodified 1243.6408 0.64083038 1575 P49454 CENPF Centromere protein F yes yes 0 0 0 By MS/MS 2 0 1 1 37.636 32.721 2 0.00041238 42798 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 144.77 81.205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13034 1575 11905 110157 88037 88037 1 ELSQNTDESGLNDEAIAK Unmodified 1932.8912 0.891244 1349 P35251 RFC1 Replication factor C subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 48.742 48.909 2 4.484E-26 54277 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 136.24 113.33 115200000 0 0 0 5070000 5464400 0 9226400 7532500 7393700 10755000 11050000 18944000 10482000 6087100 23198000 13035 1349 11906 110158;110159;110160;110161;110162;110163;110164;110165;110166;110167;110168 88038;88039;88040;88041;88042;88043;88044;88045;88046;88047;88048 88040 11 ELSRIEEALQK Unmodified 1314.7143 0.71432967 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 52.865 52.959 3 0.0052235 59847 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 53.211 40.203 101110000 0 0 0 5932600 4806400 9390600 9441500 7501000 6246000 11522000 11199000 18447000 8853400 7767400 0 13036 3023 11907 110169;110170;110171;110172;110173;110174;110175;110176;110177;110178;110179 88049;88050 88049 2 ELSRKPDIYER Unmodified 1404.7361 0.73612775 1332 P33991 MCM4 DNA replication licensing factor MCM4 yes yes 0 0 2 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 26.802 27.047 3 0.0066774 27562 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.289 55.484 141810000 0 0 0 0 4754500 12324000 9981100 0 5128400 11005000 15604000 29282000 9360900 8759800 35609000 13037 1332 11908 110180;110181;110182;110183;110184;110185;110186;110187;110188;110189 88051;88052 88052 0 ELSRSFTNQIIL Unmodified 1419.7722 0.7721789 3878 Q96IJ6 GMPPA Mannose-1-phosphate guanyltransferase alpha yes yes 0 0 1 By MS/MS 2 0 1 1 87.931 79.801 2 0.022739 103816 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.331 82.194 41711000 41711000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13038 3878 11909 110190 88053 88053 1 ELSRTEQIRK Unmodified 1258.6993 0.69934831 3489 Q8TCG1 KIAA1524 Protein CIP2A yes yes 0 0 2 By MS/MS 2 0 1 1 15.948 11.835 3 0.022568 17432 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.704 37.312 51711000 51711000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13039 3489 11910 110191 88054 88054 0 ELSSALTTPEMQK Unmodified 1433.7072 0.70719538 4829 Q9P2W1 PSMC3IP Homologous-pairing protein 2 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 61.131 55.256 2 2.3284E-23 71069 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 153.1 119.74 33494000 0 33494000 0 0 0 0 0 0 0 0 0 0 0 0 0 13040 4829 11911 110192 88055 88055 1 ELSSCANVLELTR Unmodified 1490.7399 0.73989249 3572 Q8WWH5 TRUB1 Probable tRNA pseudouridine synthase 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 73.989 74.033 2 7.4144E-08 85360 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 98.353 47.262 73136000 0 0 0 5305400 4092900 12372000 5190700 0 5644500 0 7840700 9789700 8238800 5979300 8681400 13041 3572 11912 110193;110194;110195;110196;110197;110198;110199;110200;110201;110202 88056;88057;88058;88059;88060;88061;88062;88063;88064 88060 9 ELSSCANVLELTRTK Unmodified 1719.8825 0.88253399 3572 Q8WWH5 TRUB1 Probable tRNA pseudouridine synthase 1 yes yes 0 0 1 By MS/MS 2 0 1 1 72.299 69.214 3 0.0002164 84803 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 60.474 43.255 3289500 0 0 3289500 0 0 0 0 0 0 0 0 0 0 0 0 13042 3572 11913 110203 88065;88066 88066 2 ELSSSTQGELVAPLHPR Unmodified 1819.9428 0.94282606 9 A1L390 PLEKHG3 Pleckstrin homology domain-containing family G member 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 61.276 61.528 3 0.023965 69923 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 27.85 21.956 22562000 0 0 0 0 0 0 0 0 2875400 6345200 0 0 3630200 4229400 5481700 13043 9 11914 110204;110205;110206;110207;110208 88067 88067 1 ELSTDIEDFVHPGHGDLSGWAK Unmodified 2409.1237 0.12370355 975 P13051 UNG Uracil-DNA glycosylase yes yes 0 0 0 By MS/MS 2 0 1 1 90.985 82.854 4 1.1344E-06 107577 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.922 61.214 8460700 8460700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13044 975 11915 110209 88068 88068 1 ELSTTLNADEAVTR Unmodified 1518.7526 0.75256567 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 55.422 55.029 2 0.00039575 62475 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.593 67.285 165060000 0 45326000 0 0 3979300 4660600 0 5101500 2101400 4692000 22872000 15112000 0 16473000 44741000 13045 1337 11916 110210;110211;110212;110213;110214;110215;110216;110217;110218;110219 88069;88070;88071;88072;88073;88074;88075;88076;88077;88078;88079 88073 11 ELSTVQESFLVK Unmodified 1378.7344 0.73439641 36 A8K2U0 A2ML1 Alpha-2-macroglobulin-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 74.505 74.427 2 0.00028708 86257 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 105.17 73.231 49184000 0 0 0 25194000 0 0 0 10531000 0 13459000 0 0 0 0 0 13046 36 11917 110220;110221;110222 88080;88081;88082 88082 3 ELSVEEQIK Unmodified 1073.5605 0.56045479 4893 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 49.272 44.858 2 0.0072004 58008 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102 51.37 118080000 4571400 94541000 0 0 0 0 0 0 0 0 18964000 0 0 0 0 13047 4893 11918 110223;110224;110225 88083;88084 88083 2 ELSVQDQPSLSPTSLQNSSSHTTTAK Unmodified 2742.3308 0.33079579 675 O95628 CNOT4 CCR4-NOT transcription complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 63.903 63.159 3 1.0481E-62 71546 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 114.9 100.49 156000000 0 41520000 0 0 7057300 10618000 8377300 0 6131500 13589000 12646000 13316000 9672800 12211000 20864000 13048 675 11919 110226;110227;110228;110229;110230;110231;110232;110233;110234;110235;110236;110237 88085;88086;88087;88088;88089;88090;88091;88092;88093;88094;88095;88096;88097;88098;88099 88092 15 ELSVQNQDLIEK Unmodified 1414.7304 0.73037367 2928 Q6P2H3 CEP85 Centrosomal protein of 85 kDa yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 56.489 56.155 2 2.1744E-06 70821 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 133.23 109.11 166690000 0 91857000 0 4997400 3659700 7008600 4867200 5633900 5110200 7566200 6084400 9055400 5086600 5784400 9980500 13049 2928 11920 110238;110239;110240;110241;110242;110243;110244;110245;110246;110247;110248;110249;110250 88100;88101;88102;88103;88104;88105;88106;88107;88108;88109;88110 88103 10 ELSYMVVSR Unmodified 1082.543 0.54303059 2995 Q6YHK3 CD109 CD109 antigen yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 58.492 58.686 2 0.0094522 66817 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 66.692 49.399 31025000 0 0 0 0 2524900 3005400 0 2677000 2527500 3099300 5719800 4952700 0 0 6517800 13050 2995 11921 110251;110252;110253;110254;110255;110256;110257;110258;110259 88111;88112;88113;88114;88115;88116;88117;88118 88111 8 ELTADARELK Unmodified 1144.6088 0.60880197 1532 P48059 LIMS1 LIM and senescent cell antigen-like-containing domain protein 1 yes yes 0 0 1 By matching By MS/MS By MS/MS 2.5 0.5 3 3 1 4 1 36.142 31.556 2;3 2.4375E-47 41569 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 215.14 101.96 350730000 1366100 333170000 16196000 0 0 0 0 0 0 0 0 0 0 0 0 13051 1532 11922 110260;110261;110262;110263;110264;110265 88119;88120;88121;88122;88123;88124 88119 5 ELTAEPTIVAQLCK Unmodified 1571.8229 0.82289384 4155 Q9BU02 THTPA Thiamine-triphosphatase yes yes 0 0 0 By MS/MS 2 0 1 1 83.929 79.209 2 0.022445 98468 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 53.028 14.444 24261000 0 24261000 0 0 0 0 0 0 0 0 0 0 0 0 0 13052 4155 11923 110266 88125 88125 1 ELTAPDENIPAK Unmodified 1296.6561 0.65614609 945 P11387 TOP1 DNA topoisomerase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 47.287 47.023 2 0.001361 52986 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 87.149 73.379 147000000 0 26316000 0 0 6639300 8538600 10153000 9481600 7433300 12993000 12853000 20402000 11219000 7514000 13458000 13053 945 11924 110267;110268;110269;110270;110271;110272;110273;110274;110275;110276;110277;110278 88126;88127;88128;88129;88130;88131;88132;88133;88134;88135;88136;88137;88138 88129 12 ELTAQIAAGR Unmodified 1028.5615 0.56145784 4653 Q9NUQ8 ABCF3 ATP-binding cassette sub-family F member 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 40.285 40.11 2 0.00035229 44371 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 132.57 67.791 63252000 0 0 0 13067000 14028000 0 0 0 13636000 22521000 0 0 0 0 0 13054 4653 11925 110279;110280;110281;110282;110283;110284;110285;110286;110287 88139;88140;88141;88142;88143;88144;88145;88146;88147 88143 9 ELTAVVQK Unmodified 886.51238 0.51238239 1156 P23396 RPS3 40S ribosomal protein S3 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.347 30.536 2 0.02509 31722 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 58.981 25.243 338690000 0 0 0 19904000 19987000 21044000 14069000 17692000 14117000 28686000 33002000 43701000 42094000 37025000 47372000 13055 1156 11926 110288;110289;110290;110291;110292;110293;110294;110295;110296;110297;110298;110299 88148;88149 88148 2 ELTCQILEQK Unmodified 1260.6384 0.63838754 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 54.787 55.058 2 0.0025956 62753 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 99.136 68.969 37748000 0 0 0 0 0 4598400 0 5626800 4433800 0 4559200 0 7454100 4484600 6591100 13056 2291 11927 110300;110301;110302;110303;110304;110305;110306;110307 88150;88151;88152;88153;88154;88155;88156;88157;88158 88156 7 ELTDEEAER Unmodified 1090.4778 0.47784737 5087 Q9Y266 NUDC Nuclear migration protein nudC yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.951 17.13 2 0.0077155 17540 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 71.692 34.991 71142000 0 0 0 3151600 2198900 9011900 3965800 3066400 2369900 4887200 7258700 8142700 5052000 6951800 15085000 13057 5087 11928 110308;110309;110310;110311;110312;110313;110314;110315;110316;110317;110318;110319 88159;88160;88161;88162;88163;88164;88165;88166;88167;88168 88160 10 ELTDEEAERLQLEIDQK Unmodified 2058.0117 0.011693483 5087 Q9Y266 NUDC Nuclear migration protein nudC yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 2 2 2 77.297 72.995 2;3 1.0776E-18 89738 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 114.96 102.83 702500000 417480000 228810000 56205000 0 0 0 0 0 0 0 0 0 0 0 0 13058 5087 11929 110320;110321;110322;110323;110324;110325 88169;88170;88171;88172;88173;88174 88174 3 ELTDEEAERLQLEIDQKK Unmodified 2186.1067 0.1066565 5087 Q9Y266 NUDC Nuclear migration protein nudC yes yes 0 0 2 By MS/MS 2 0 2 2 75.703 67.573 3;4 0.00024885 89188 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.98 56.153 43558000 43558000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13059 5087 11930 110326;110327 88175;88176 88176 2 ELTDRNWDQEDEAEEVGTFSMASEEVLK Unmodified 3256.4354 0.4353968 4978 Q9UKX7 NUP50 Nuclear pore complex protein Nup50 yes yes 0 0 1 By MS/MS 2 0 1 1 91.082 82.951 3 5.0906E-57 107627 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 119.85 114.42 13083000 13083000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13060 4978 11931 110328 88177 88177 1 ELTDSPATSK Unmodified 1047.5084 0.50841922 2594 Q15911 ZFHX3 Zinc finger homeobox protein 3 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 15.546 15.731 2 0.011338 15368 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 54.416 36.281 17068000 0 0 0 0 1408800 0 2810500 0 0 3915700 3343500 0 0 0 5589200 13061 2594 11932 110329;110330;110331;110332;110333;110334;110335 88178;88179;88180;88181 88178 4 ELTEEQQNLQK Unmodified 1358.6678 0.66777341 970 P12757 SKIL Ski-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.494 26.694 2 0.0055011 28398 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 79.059 66.022 38903000 0 0 0 2185700 2094000 3263900 3992100 3776500 2487400 3787400 3700900 3275800 3992600 2845400 3501600 13062 970 11933 110336;110337;110338;110339;110340;110341;110342;110343;110344;110345;110346;110347 88182;88183;88184;88185;88186;88187 88184 6 ELTELAR Unmodified 830.44978 0.44978213 670 O95573 ACSL3 Long-chain-fatty-acid--CoA ligase 3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 33.427 33.344 2 0.017319 36844 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 114.19 37.339 121870000 0 0 0 19714000 22377000 19087000 24109000 21373000 15210000 0 0 0 0 0 0 13063 670 11934 110348;110349;110350;110351;110352;110353;110354 88188;88189;88190;88191;88192;88193;88194;88195 88194 8 ELTENILK Unmodified 958.53351 0.53351176 3034 Q75QN2 INTS8 Integrator complex subunit 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 53.278 53.193 2 0.010595 59083 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 79.146 13.469 57647000 0 0 0 0 10425000 17047000 0 0 0 0 0 0 0 30176000 0 13064 3034 11935 110355;110356;110357 88196;88197;88198 88197 3 ELTGDMQLSK Unmodified 1120.5434 0.54342452 3320 Q8N3C0 ASCC3 Activating signal cointegrator 1 complex subunit 3 yes yes 0 0 0 By MS/MS 2 0 1 1 47.569 42.006 2 0.039504 54638 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 55.235 33.488 30474000 0 30474000 0 0 0 0 0 0 0 0 0 0 0 0 0 13065 3320 11936 110358 88199 88199 1 ELTGEDVLVR Unmodified 1129.5979 0.59790293 2602 Q16401 PSMD5 26S proteasome non-ATPase regulatory subunit 5 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 2 1 1 57.535 57.651 2 0.0014466 65456 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 91.069 44.002 148190000 0 0 0 5373800 12854000 12433000 7610200 10315000 0 19301000 16378000 12720000 13189000 13084000 24927000 13066 2602 11937 110359;110360;110361;110362;110363;110364;110365;110366;110367;110368;110369;110370 88200;88201;88202;88203;88204;88205;88206;88207;88208;88209;88210;88211;88212 88203 13 ELTGIQQGFLPK Unmodified 1329.7293 0.72925145 4070 Q99933 BAG1 BAG family molecular chaperone regulator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 77.19 76.056 2 3.0976E-14 96244 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 134.05 99.799 1503000000 38055000 1145000000 19163000 12496000 13574000 23165000 21065000 17133000 14709000 25636000 29260000 33945000 21096000 25678000 63009000 13067 4070 11938 110371;110372;110373;110374;110375;110376;110377;110378;110379;110380;110381;110382;110383;110384;110385;110386 88213;88214;88215;88216;88217;88218;88219;88220;88221;88222;88223;88224;88225 88219 13 ELTGLLTTAK Unmodified 1045.6019 0.60192568 4823 Q9P2N6 KANSL3 KAT8 regulatory NSL complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 63.743 63.073 2 0.002198 72110 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 85.676 55.491 159830000 0 43257000 0 0 7268600 8593800 10422000 11799000 7636900 13063000 9934200 18340000 10822000 8239000 10457000 13068 4823 11939 110387;110388;110389;110390;110391;110392;110393;110394;110395;110396;110397;110398;110399;110400 88226;88227;88228;88229;88230;88231;88232;88233;88234;88235;88236;88237;88238;88239;88240 88237 15 ELTGPAVLAVELCSR Unmodified 1613.8447 0.84469192 1234 P28340 POLD1 DNA polymerase delta catalytic subunit yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 87.067 87.21 2 0.0013746 100907 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.693 31.245 6965000 0 0 0 0 0 0 0 0 0 2112600 1700200 0 0 1413800 1738400 13069 1234 11940 110401;110402;110403;110404 88241;88242;88243 88241 3 ELTGRTLLSVPGYK Unmodified 1532.8562 0.85624288 1210 P26640 VARS Valine--tRNA ligase yes yes 0 0 1 By MS/MS 2 0 1 1 79.823 71.693 3 0.0036889 94101 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.21 43.967 97730000 97730000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13070 1210 11941 110405 88244;88245 88245 2 ELTHVASENETELK Unmodified 1598.7788 0.77878042 4284 Q9C0B7 TANGO6 Transport and Golgi organization protein 6 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 1 3 1 40.876 35.92 2;3 0.00044054 47164 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.972 38.545 72638000 6056100 63367000 3214100 0 0 0 0 0 0 0 0 0 0 0 0 13071 4284 11942 110406;110407;110408;110409;110410 88246;88247;88248 88246 2 ELTIATK Unmodified 774.44872 0.4487195 5276 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 32.542 28.035 2 0.031063 36217 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.777 5.4172 35165000 0 35165000 0 0 0 0 0 0 0 0 0 0 0 0 0 13072 5276 11943 110411;110412 88249;88250 88249 2 ELTIDSIMNK Unmodified 1162.5904 0.59037471 1331 P33981 TTK Dual specificity protein kinase TTK yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 75.436 75.479 2 0.0046058 87065 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 72.23 44.348 28115000 0 0 0 1666900 0 6150100 2376300 4496700 3145600 5199600 5079700 0 0 0 0 13073 1331 11944 110413;110414;110415;110416;110417;110418;110419 88251;88252;88253 88251 3 ELTLENSELK Unmodified 1174.6081 0.60813326 1575 P49454 CENPF Centromere protein F yes yes 0 0 0 By MS/MS 2 0 1 1 59.175 53.332 2 0.011538 68641 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.879 32.812 20756000 0 20756000 0 0 0 0 0 0 0 0 0 0 0 0 0 13074 1575 11945 110420 88254 88254 1 ELTLQDVELLK Unmodified 1299.7286 0.72858275 2229 Q13049 TRIM32 E3 ubiquitin-protein ligase TRIM32 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 85.753 85.889 2 0.0013097 99250 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.886 53.329 8018600 0 0 0 0 0 0 0 0 0 3567000 0 0 0 0 4451600 13075 2229 11946 110421;110422 88255 88255 1 ELTLQPGALTNSGK Unmodified 1427.762 0.76200815 3964 Q96R06 SPAG5 Sperm-associated antigen 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 65.165 65.242 2 0.00041226 74630 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 71.221 53.785 29377000 0 0 0 2214400 1729600 0 2458200 0 0 0 5327300 6607700 3543200 2922300 4574700 13076 3964 11947 110423;110424;110425;110426;110427;110428;110429;110430;110431 88256;88257;88258;88259;88260;88261;88262;88263;88264 88262 9 ELTLRSQALELNK Unmodified 1513.8464 0.84640648 463 O75150 RNF40 E3 ubiquitin-protein ligase BRE1B yes yes 0 0 1 By MS/MS 2 0 2 2 72.51 64.271 2;3 3.8013E-06 85212 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.39 54.349 60472000 60472000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13077 463 11948 110432;110433 88265;88266 88265 2 ELTMASLPFTFDVER Oxidation (M) 1770.8498 0.84983687 4323 Q9H0D6 XRN2 5'-3' exoribonuclease 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 89.634 89.762 2 0.00021852 103975 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.267 52.009 15639000 0 0 0 0 0 1252000 0 0 0 4928100 3081100 0 0 0 6377700 13078 4323 11949 110434;110435;110436;110437 88267;88268;88269 88268 5786 3 ELTNEMIVTK Oxidation (M) 1192.6009 0.6009394 263 O15178 T Brachyury protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 2 1 1 1 1 1 1 44.121 44.199 2 0.0084259 49885 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.854 6.773 338340000 0 0 0 45725000 0 57362000 0 44498000 45253000 0 0 31452000 65711000 48340000 0 13079 263 11950 110438;110439;110440;110441;110442;110443;110444;110445 88270;88271;88272;88273;88274;88275 88270 353 6 ELTNQQEASVER Unmodified 1402.6688 0.66883604 2391 Q14203 DCTN1 Dynactin subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.036 24.26 2 1.2182E-07 26057 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 117.02 75.021 54271000 0 0 0 2787300 2602600 0 3026600 3298400 4046600 6128600 6483100 7227800 5131000 5174500 8364400 13080 2391 11951 110446;110447;110448;110449;110450;110451;110452;110453;110454;110455;110456;110457 88276;88277;88278;88279;88280;88281;88282;88283;88284;88285;88286;88287 88276 12 ELTPASPTCTNSVSK Unmodified 1590.7559 0.75593649 1238 P28715 ERCC5 DNA repair protein complementing XP-G cells yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 36.783 36.84 2 0.00083589 40775 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 61.344 43.908 24885000 0 0 0 0 2477300 4053500 3575200 3749700 2777900 4289200 0 0 3962700 0 0 13081 1238 11952 110458;110459;110460;110461;110462;110463;110464;110465;110466;110467 88288;88289;88290;88291;88292;88293;88294;88295 88289 8 ELTPLQAMMLR Oxidation (M) 1317.6785 0.67847821 5123 Q9Y2W2 WBP11 WW domain-binding protein 11 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 1 2 2 2 2 2 2 2 2 1 78.897 78.948 2 2.5125E-05 94366 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 117.04 87.949 154010000 0 0 0 7035400 11608000 5626000 14028000 16686000 12612000 16216000 18388000 23552000 4706300 12581000 10969000 13082 5123 11953 110468;110469;110470;110471;110472;110473;110474;110475;110476;110477;110478;110479;110480;110481;110482;110483;110484;110485;110486;110487;110488;110489 88296;88297;88298;88299;88300;88301;88302;88303;88304;88305;88306;88307;88308;88309;88310;88311;88312;88313;88314;88315;88316;88317 88301 6511;6512 22 ELTPLQAMMLR Unmodified 1301.6836 0.68356359 5123 Q9Y2W2 WBP11 WW domain-binding protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 88.73 87.948 2 0.00027424 101889 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 101.54 72.393 38811000 7955200 0 0 0 0 1704800 2897100 0 2175000 0 4419500 4041100 2051900 3082500 10484000 13083 5123 11953 110490;110491;110492;110493;110494;110495;110496;110497;110498;110499;110500 88318;88319;88320;88321;88322;88323;88324;88325;88326;88327;88328 88321 11 ELTPLQAMMLR 2 Oxidation (M) 1333.6734 0.67339283 5123 Q9Y2W2 WBP11 WW domain-binding protein 11 yes yes 0 2 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 1 2 2 1 2 1 1 1 1 1 61.624 61.734 2 0.00017138 70692 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 82.279 52.024 187840000 0 0 0 8853100 12766000 10532000 33934000 20367000 8385000 26519000 14447000 21826000 11607000 9272700 9327400 13084 5123 11953 110501;110502;110503;110504;110505;110506;110507;110508;110509;110510;110511;110512;110513;110514;110515 88329;88330;88331;88332;88333;88334;88335;88336;88337;88338;88339;88340;88341;88342 88339 6511;6512 12 ELTPQVVSAAR Unmodified 1169.6404 0.64043645 1073 P18206 VCL Vinculin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.578 49.735 2 0.00028299 54990 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.098 64.88 488530000 0 0 0 38392000 15373000 52590000 28846000 20708000 18135000 31070000 53556000 53852000 20491000 37023000 118500000 13085 1073 11954 110516;110517;110518;110519;110520;110521;110522;110523;110524;110525;110526;110527 88343;88344;88345;88346;88347;88348;88349;88350;88351;88352;88353;88354;88355 88347 13 ELTRAASDYAGK Unmodified 1280.6361 0.63607935 1234 P28340 POLD1 DNA polymerase delta catalytic subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 5 2 2 1 26.883 22.431 2;3 1.4567E-21 29786 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 163.9 123.02 176540000 20338000 114440000 41763000 0 0 0 0 0 0 0 0 0 0 0 0 13086 1234 11955 110528;110529;110530;110531;110532 88356;88357 88356 2 ELTSLVK Unmodified 788.46437 0.46436956 151 O00422 SAP18 Histone deacetylase complex subunit SAP18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.42 1.93 1 11 1 1 1 1 1 1 1 1 1 1 1 1 42.603 42.314 2 0.023433 46634 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 85.359 19.462 224950000 0 10933000 0 12337000 14605000 16919000 16024000 20091000 13789000 22982000 23921000 27504000 24508000 21335000 0 13087 151 11956 110533;110534;110535;110536;110537;110538;110539;110540;110541;110542;110543;110544 88358;88359;88360;88361;88362 88361 5 ELTSSGGPTK Unmodified 975.48729 0.48728985 3809 Q96EE3 SEH1L Nucleoporin SEH1 yes yes 0 0 0 By MS/MS 2 0 1 1 11.573 8.2943 2 0.022926 11409 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.823 10.186 12671000 0 12671000 0 0 0 0 0 0 0 0 0 0 0 0 0 13088 3809 11957 110545 88363 88363 1 ELTSTCSPIISK Unmodified 1334.6752 0.67516697 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.18 3.74 3 1 7 1 2 1 1 1 1 1 1 1 1 49.393 47.432 2 1.2009E-08 54050 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 150.08 115.82 2093300000 33820000 1697000000 9692000 8659100 4768500 10577000 0 0 0 0 63446000 58116000 0 42994000 164230000 13089 1337 11958 110546;110547;110548;110549;110550;110551;110552;110553;110554;110555;110556 88364;88365;88366;88367;88368;88369;88370;88371;88372;88373;88374;88375 88372 8 ELTTEIDNNIEQISSYK Unmodified 1995.9637 0.96368066 72 CON__P13645;P13645 KRT10 Keratin, type I cytoskeletal 10 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.46 3.11 1 10 4 61 3 10 2 5 5 5 5 5 5 6 5 5 5 5 5 79.849 79.309 2;3 0 94042 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 332.96 311.3 + 32772000000 59650000 7068600000 35116000 1273800000 1285500000 1322700000 862740000 2819000000 1192200000 4565700000 3344800000 3979600000 1314400000 1348000000 2299600000 13090 72 11959 110557;110558;110559;110560;110561;110562;110563;110564;110565;110566;110567;110568;110569;110570;110571;110572;110573;110574;110575;110576;110577;110578;110579;110580;110581;110582;110583;110584;110585;110586;110587;110588;110589;110590;110591;110592;110593;110594;110595;110596;110597;110598;110599;110600;110601;110602;110603;110604;110605;110606;110607;110608;110609;110610;110611;110612;110613;110614;110615;110616;110617;110618;110619;110620;110621;110622;110623;110624;110625;110626;110627;110628;110629;110630;110631;110632 88376;88377;88378;88379;88380;88381;88382;88383;88384;88385;88386;88387;88388;88389;88390;88391;88392;88393;88394;88395;88396;88397;88398;88399;88400;88401;88402;88403;88404;88405;88406;88407;88408;88409;88410;88411;88412;88413;88414;88415;88416;88417;88418;88419;88420;88421;88422;88423;88424;88425;88426;88427;88428;88429;88430;88431;88432;88433;88434;88435;88436;88437;88438;88439;88440;88441;88442;88443;88444;88445;88446;88447;88448;88449;88450 88378 65 ELTVDNSFEFEK Unmodified 1456.6722 0.67219008 4892 Q9UHA3 RSL24D1 Probable ribosome biogenesis protein RLP24 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 77.763 72.987 2 2.1881E-13 90918 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 132.32 92.252 42678000 0 42678000 0 0 0 0 0 0 0 0 0 0 0 0 0 13091 4892 11960 110633;110634 88451;88452 88451 2 ELTVSNNDINEAGVR Unmodified 1629.7958 0.79582747 979 P13489 RNH1 Ribonuclease inhibitor yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 53.274 52.634 2 3.7178E-215 59710 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 234.92 171.11 555720000 0 59970000 0 34383000 23130000 61784000 35952000 26513000 19044000 59627000 45390000 44362000 36241000 40640000 68678000 13092 979 11961 110635;110636;110637;110638;110639;110640;110641;110642;110643;110644;110645;110646;110647;110648 88453;88454;88455;88456;88457;88458;88459;88460;88461;88462;88463;88464;88465;88466 88461 14 ELTVSNNDINEAGVRVLCQGLK Unmodified 2428.238 0.2380218 979 P13489 RNH1 Ribonuclease inhibitor yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 84.769 79.647 3 1.5125E-84 101124 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 147.06 107.86 101790000 18348000 60335000 23102000 0 0 0 0 0 0 0 0 0 0 0 0 13093 979 11962 110649;110650;110651 88467;88468;88469;88470;88471 88469 5 ELTYQNTDLSEIK Unmodified 1552.7621 0.76206772 2661 Q32MZ4 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS 5 3.56 1 1 1 2 1 67.294 63.968 2 9.9102E-33 73604 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 167.09 129.9 128050000 0 113220000 0 0 0 0 0 0 0 0 0 0 0 0 14830000 13094 2661 11963 110652;110653;110654 88472;88473 88473 2 ELTYQNTDLSEIKEEEQVK Unmodified 2295.1118 0.11180146 2661 Q32MZ4 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.846 66.928 3 1.5234E-41 76127 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 112.74 104.56 140920000 0 0 0 3967500 8964300 7313200 4944400 8633800 5524800 13223000 17486000 21950000 7733900 10422000 30758000 13095 2661 11964 110655;110656;110657;110658;110659;110660;110661;110662;110663;110664;110665;110666 88474;88475;88476;88477;88478;88479;88480;88481;88482;88483 88476 10 ELTYTEATFDK Unmodified 1316.6136 0.61361257 2674 Q3MJ16 PLA2G4E Cytosolic phospholipase A2 epsilon yes yes 0 0 0 By MS/MS 10 0 1 1 56.955 56.286 2 0.02364 64694 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 41.399 17.178 6495800 0 0 0 6495800 0 0 0 0 0 0 0 0 0 0 0 13096 2674 11965 110667 88484 88484 1 ELVAENLSVR Unmodified 1128.6139 0.61388734 2555 Q15642 TRIP10 Cdc42-interacting protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 56.09 56.414 2 0.0021243 63205 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.205 22.904 20594000 0 0 0 0 0 0 0 0 0 5416400 0 0 0 5378400 9799100 13097 2555 11966 110668;110669;110670;110671;110672 88485;88486;88487;88488;88489 88487 5 ELVALMSAIRDGETPDPEDPSRK Unmodified 2525.2432 0.24316676 896 P09960 LTA4H Leukotriene A-4 hydrolase yes yes 0 0 2 By MS/MS 2 0 2 2 87.516 79.386 3;4 1.7218E-19 103342 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 99.407 71.729 87507000 87507000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13098 896 11967 110673;110674 88490;88491;88492 88492 2 ELVASAGLDR Unmodified 1029.5455 0.54547343 3470 Q8TAF3 WDR48 WD repeat-containing protein 48 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 42.198 42.798 2 0.018376 46802 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.423 13.174 22352000 0 0 0 0 0 0 0 0 0 0 11925000 0 0 0 10427000 13099 3470 11968 110675;110676 88493 88493 1 ELVDRHGEEVTPEDVLSAAMYPDVFAHFK Unmodified 3300.5761 0.57612822 951 P11498 PC Pyruvate carboxylase, mitochondrial yes yes 0 0 1 By MS/MS 2 0 1 1 98.384 90.254 5 0.034683 116460 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 19.597 16.77 11594000 11594000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13100 951 11969 110677 88494 88494 0 ELVEAECGGANPLMK Oxidation (M) 1632.7487 0.74874262 1627 P50542 PEX5 Peroxisomal targeting signal 1 receptor yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 54.053 54.347 2 4.731E-10 61677 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 94.801 76.534 37273000 0 0 0 0 0 3069600 4229100 0 2741200 4881500 3788000 6736800 4452200 3361900 4013300 13101 1627 11970 110678;110679;110680;110681;110682;110683;110684;110685;110686;110687 88495;88496;88497;88498;88499;88500;88501;88502 88496 2606 8 ELVEAECGGANPLMK Unmodified 1616.7538 0.753828 1627 P50542 PEX5 Peroxisomal targeting signal 1 receptor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 7 1 1 1 1 1 1 1 63.815 63.968 2 6.7189E-05 73175 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 81.865 65.233 20699000 0 0 0 0 1614500 0 0 2415900 0 0 5017300 0 0 3627400 8023800 13102 1627 11970 110688;110689;110690;110691;110692;110693;110694 88503;88504;88505;88506 88503 4 ELVEGEMK Unmodified 933.44773 0.44773322 2532 Q15424 SAFB Scaffold attachment factor B1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 28.48 28.924 2 0.017693 30316 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.252 27.119 51982000 0 0 0 0 0 0 0 0 0 4886100 9209000 10696000 6864900 6829100 13497000 13103 2532 11971 110695;110696;110697;110698;110699;110700 88507;88508;88509;88510 88508 4 ELVELNK Unmodified 843.47018 0.47018322 632 O95239 KIF4A Chromosome-associated kinesin KIF4A yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 2 1 1 36.192 36.211 2 0.023384 42374 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 88.029 6.6476 84349000 0 0 0 7702100 6115700 19811000 0 6326900 12013000 16184000 16196000 0 0 0 0 13104 632 11972 110701;110702;110703;110704;110705;110706;110707;110708 88511;88512 88512 2 ELVEMVK Unmodified 846.45209 0.45209032 4021 Q99543 DNAJC2 DnaJ homolog subfamily C member 2;DnaJ homolog subfamily C member 2, N-terminally processed yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 50.154 44.833 2 0.025219 58574 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.74 49.17 89104000 0 89104000 0 0 0 0 0 0 0 0 0 0 0 0 0 13105 4021 11973 110709;110710 88513 88513 1 ELVENSLDAGATNIDLK Unmodified 1800.9105 0.91052288 1739;2339 P54278;Q13401;A4D2B8;Q13670 PMS2;PMS2P3;PMS2P1;PMS2P11 Mismatch repair endonuclease PMS2;Putative postmeiotic segregation increased 2-like protein 3;Putative postmeiotic segregation increased 2-like protein 1;Putative postmeiotic segregation increased 2-like protein 11 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 8.36 3.15 2 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 76.468 75.345 2 1.923E-96 92623 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 206.53 139.2 432210000 8286000 256780000 0 4404800 10799000 10398000 11184000 14234000 0 23963000 20583000 20164000 10749000 15999000 24667000 13106 1739;2339 11974 110711;110712;110713;110714;110715;110716;110717;110718;110719;110720;110721;110722;110723;110724 88514;88515;88516;88517;88518;88519;88520;88521;88522;88523;88524;88525;88526;88527 88517 14 ELVEPVSR Unmodified 927.50255 0.50254598 1591 P49748 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 33.313 33.516 2 0.0045978 37176 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 130.04 82.29 191960000 0 0 0 0 26279000 0 0 26126000 24576000 33979000 48889000 32111000 0 0 0 13107 1591 11975 110725;110726;110727;110728;110729;110730;110731;110732;110733 88528;88529;88530;88531;88532;88533;88534;88535;88536 88536 8 ELVEPVSRFFEEVNDPAK Unmodified 2104.0477 0.047685059 1591 P49748 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 0 0 1 By MS/MS 2 0 1 1 93.304 85.174 3 0.0001664 110309 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.153 52.54 25049000 25049000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13108 1591 11976 110734 88537 88537 1 ELVGEFLQFVQLDK Unmodified 1663.8821 0.88212328 3194 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 yes yes 0 0 0 By MS/MS 2 0 1 1 100.11 91.98 2 0.0015859 118563 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.479 58.416 5346600 5346600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13109 3194 11977 110735 88538 88538 1 ELVGPPLAETVFTPK Unmodified 1596.8763 0.87630962 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 88.467 87.35 2 1.3869E-05 100876 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 83.314 57.195 590460000 11544000 333830000 6733600 8407400 12893000 20587000 14923000 16451000 13643000 26933000 21921000 30095000 17083000 21001000 34410000 13110 1601 11978 110736;110737;110738;110739;110740;110741;110742;110743;110744;110745;110746;110747;110748;110749;110750;110751 88539;88540;88541;88542;88543;88544;88545;88546;88547;88548;88549;88550;88551;88552;88553;88554;88555;88556 88547 18 ELVHYQQSPGEDTSLR Unmodified 1857.8857 0.88570511 5006 Q9ULV0 MYO5B Unconventional myosin-Vb yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 46.509 46.25 3 0.037249 52068 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 26.075 19.242 10903000 0 0 0 4553600 0 6349700 0 0 0 0 0 0 0 0 0 13111 5006 11979 110752;110753 88557 88557 1 ELVIPLIQNGHR Unmodified 1387.7936 0.79358305 3686 Q92917 GPKOW G patch domain and KOW motifs-containing protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.373 78.433 3 0.0015296 90624 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 63.212 55.605 103550000 0 0 0 5773500 3224700 10557000 5046200 6424100 5520900 8185700 10739000 10335000 7119000 6594400 24032000 13112 3686 11980 110754;110755;110756;110757;110758;110759;110760;110761;110762;110763;110764;110765 88558;88559;88560;88561;88562;88563;88564;88565;88566;88567 88567 10 ELVLALYDYQEK Unmodified 1482.7606 0.76061116 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS 8.4 3.2 1 4 1 1 1 1 1 84.356 82.83 2 1.5017E-09 104699 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 141.95 111.7 42743000 30970000 0 0 0 0 2883500 1112600 0 0 0 0 0 0 2181100 5595600 13113 2344 11981 110766;110767;110768;110769;110770 88568;88569;88570 88570 3 ELVLDNCK Unmodified 989.48518 0.48518136 3651 Q92688 ANP32B Acidic leucine-rich nuclear phosphoprotein 32 family member B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.225 34.408 2 0.0052431 38257 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 107.59 62.872 324210000 0 0 0 16853000 11066000 20230000 18296000 12747000 17694000 19178000 46147000 66172000 38581000 20159000 37087000 13114 3651 11982 110771;110772;110773;110774;110775;110776;110777;110778;110779;110780;110781;110782 88571;88572;88573;88574;88575;88576;88577;88578;88579;88580;88581;88582 88581 7 ELVLDNSR Unmodified 944.49271 0.49270958 1404 P39687 ANP32A Acidic leucine-rich nuclear phosphoprotein 32 family member A yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.364 33.548 2 0.0045343 36763 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 110.31 57.673 1608400000 0 0 0 71051000 89132000 57183000 104630000 101630000 78183000 100390000 262780000 162530000 135530000 132870000 312470000 13115 1404 11983 110783;110784;110785;110786;110787;110788;110789;110790;110791;110792;110793;110794 88583;88584;88585;88586;88587;88588;88589;88590;88591;88592 88584 9 ELVLDNSRSNEGK Unmodified 1459.7267 0.72668527 1404 P39687 ANP32A Acidic leucine-rich nuclear phosphoprotein 32 family member A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 6 2 2 4 2 30.24 25.824 2;3 2.5716E-36 32727 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 204.17 159.86 1276600000 262460000 923450000 90676000 0 0 0 0 0 0 0 0 0 0 0 0 13116 1404 11984 110795;110796;110797;110798;110799;110800;110801;110802 88593;88594;88595;88596;88597;88598;88599;88600;88601;88602;88603 88598 7 ELVLESNPK Unmodified 1027.555 0.55497548 3680 Q92889 ERCC4 DNA repair endonuclease XPF yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 7.86 3.4 1 1 5 2 1 1 1 1 1 39.925 38.793 2 0.0094872 49529 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.181 45.879 115000000 0 94073000 0 0 0 0 0 0 0 4501800 3825200 0 3252400 3661700 5683700 13117 3680 11985 110803;110804;110805;110806;110807;110808;110809 88604;88605;88606;88607;88608 88605 5 ELVLNGADTAVNK Unmodified 1342.7092 0.70924429 2725 Q5GLZ8 HERC4 Probable E3 ubiquitin-protein ligase HERC4 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 52.559 52.555 2 0.0024987 59510 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 58.37 36.133 48634000 0 0 0 6237500 0 13017000 5926200 6046000 3768700 13638000 0 0 0 0 0 13118 2725 11986 110810;110811;110812;110813;110814;110815 88609;88610;88611;88612 88611 3 ELVLQREVEVEVESMDK Unmodified 2031.0194 0.019421398 3039 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 91.878 83.748 2;3 6.9013E-63 108541 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 161.14 136.08 578460000 578460000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13119 3039 11987 110816;110817 88613;88614;88615 88614 3 ELVLQREVEVEVESMDK Oxidation (M) 2047.0143 0.01433602 3039 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 0 1 1 By MS/MS 2.33 0.471 2 1 3 82.529 75.867 2;3 2.8927E-22 98110 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 118.55 97.454 168940000 168940000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13120 3039 11987 110818;110819;110820 88616;88617;88618 88618 4646 1 ELVNAQCAK Unmodified 1031.507 0.50697943 5158 Q9Y3C7 MED31 Mediator of RNA polymerase II transcription subunit 31 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 20.263 20.408 2 0.0051423 20960 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 82.305 41.619 28362000 0 0 0 0 3202600 0 2834600 0 0 8564200 7067900 0 6692800 0 0 13121 5158 11988 110821;110822;110823;110824;110825;110826 88619;88620;88621;88622;88623 88622 4 ELVNAVATVR Unmodified 1070.6084 0.60840804 2706 Q53LP3 SOWAHC Ankyrin repeat domain-containing protein SOWAHC yes yes 0 0 0 By MS/MS 10 0 1 1 52.018 52.181 2 0.012047 58791 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 73.233 39.591 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13122 2706 11989 110827 88624 88624 1 ELVNDDEDIDWVQTEK Unmodified 1946.8745 0.8745313 1443 P41743 PRKCI Protein kinase C iota type yes yes 0 0 0 By MS/MS By MS/MS 5 3.56 1 1 1 2 1 77.419 74.527 2 1.5611E-72 92061 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 237.49 204.26 120870000 0 117000000 0 3863600 0 0 0 0 0 0 0 0 0 0 0 13123 1443 11990 110828;110829;110830 88625;88626 88625 2 ELVNDVILPK Unmodified 1138.6598 0.6597749 3009 Q6ZS30 NBEAL1 Neurobeachin-like protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 78.603 74.525 2 0.011538 93139 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.879 26.907 72802000 0 72802000 0 0 0 0 0 0 0 0 0 0 0 0 0 13124 3009 11991 110831;110832 88627;88628 88627 2 ELVNEWSLK Unmodified 1116.5815 0.58152458 5166 Q9Y3E7 CHMP3 Charged multivesicular body protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 2 1 1 1 1 1 1 1 1 1 70.36 69.68 2 0.0034522 79759 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 94.302 59.495 132130000 0 93896000 0 3247100 2305800 3455500 3077600 2331900 2490700 0 4965400 0 2124400 3829800 10409000 13125 5166 11992 110833;110834;110835;110836;110837;110838;110839;110840;110841;110842;110843;110844;110845 88629;88630;88631;88632;88633;88634;88635;88636;88637;88638;88639;88640 88631 12 ELVNNLGEIYQK Unmodified 1418.7405 0.74054442 4403 Q9H4M9 EHD1 EH domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 71.688 70.976 2 3.1204E-14 88201 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 137.98 105.66 618070000 0 466680000 3391800 7466400 7660900 16992000 11000000 7934500 7552400 16857000 12688000 15112000 11950000 11070000 21713000 13126 4403 11993 110846;110847;110848;110849;110850;110851;110852;110853;110854;110855;110856;110857;110858;110859;110860;110861 88641;88642;88643;88644;88645;88646;88647;88648;88649;88650;88651;88652;88653;88654;88655;88656;88657;88658 88644 18 ELVPDQAVISDSTFSLANSPGSESVTK Unmodified 2777.3607 0.36069894 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.64 2.9 1 1 9 2 1 1 1 1 1 1 1 1 1 86.786 86.124 2;3 1.9864E-33 105660 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.562 68.913 100490000 0 63294000 0 0 2144600 2176800 0 3876200 0 5673900 3750300 6012300 2094600 2505300 8958400 13127 2193 11994 110862;110863;110864;110865;110866;110867;110868;110869;110870;110871;110872 88659;88660;88661;88662;88663;88664;88665;88666;88667;88668 88661 9 ELVPGVPR Unmodified 865.50215 0.50215205 2077 Q02535 ID3 DNA-binding protein inhibitor ID-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 52.436 52.564 2 0.012144 58224 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.311 38.724 86070000 0 0 0 3563400 3653500 4097100 4219400 3742300 3260100 0 6101400 46303000 0 4378100 6751000 13128 2077 11995 110873;110874;110875;110876;110877;110878;110879;110880;110881;110882 88669 88669 1 ELVPPDTLHSLPK Unmodified 1444.7926 0.79257999 3679 Q92888 ARHGEF1 Rho guanine nucleotide exchange factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.473 68.551 3 0.02531 78504 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 32.068 30.301 150120000 0 0 0 7366600 6386800 14667000 10827000 12120000 9891400 14501000 18555000 10058000 13477000 13105000 19168000 13129 3679 11996 110883;110884;110885;110886;110887;110888;110889;110890;110891;110892;110893;110894 88670;88671;88672;88673 88670 1 ELVPTLPQNRK Unmodified 1293.7405 0.74048484 1428 P41134 ID1 DNA-binding protein inhibitor ID-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 2 1 1 49.894 49.116 3 0.0033009 54153 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.875 27.342 98155000 12389000 0 0 0 0 0 0 7716500 0 16736000 0 27281000 0 11559000 22474000 13130 1428 11997 110895;110896;110897;110898;110899;110900;110901 88674;88675;88676;88677;88678;88679 88675 6 ELVQDLLK Unmodified 956.55425 0.5542472 665 O95486 SEC24A Protein transport protein Sec24A yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 73.66 73.729 2 0.034963 85011 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 52.786 17.537 8288300 0 0 0 0 0 4176500 4111800 0 0 0 0 0 0 0 0 13131 665 11998 110902;110903 88680 88680 1 ELVQPFSSLFPK Unmodified 1390.7497 0.74965254 3136 Q86TI2 DPP9 Dipeptidyl peptidase 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 93.955 91.563 2 3.296E-05 113832 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.06 67.875 38967000 0 33780000 1414200 0 0 0 0 0 0 0 0 0 0 0 3773000 13132 3136 11999 110904;110905;110906 88681;88682 88681 2 ELVQQYHQFQCSR Unmodified 1721.7944 0.79438768 4731 Q9NXR7 BRE BRCA1-A complex subunit BRE yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 44.682 45.126 3 0.045184 50745 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 28.727 21.669 21620000 0 0 0 0 0 0 0 0 0 0 0 0 7333800 5805300 8480500 13133 4731 12000 110907;110908;110909 88683 88683 1 ELVQTVLAR Unmodified 1027.6026 0.60259438 1783 P56377 AP1S2 AP-1 complex subunit sigma-2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 60.391 60.121 2 0.034875 68470 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 46.334 11.085 8598300 0 0 0 3485300 0 0 0 0 0 5113100 0 0 0 0 0 13134 1783 12001 110910;110911 88684 88684 1 ELVRQLQLEAEEQRK Unmodified 1868.0116 0.011574324 3314 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 yes yes 0 0 2 By MS/MS 2 0 1 1 67.882 59.587 3 0.0028835 79696 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.324 50.127 11764000 11764000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13135 3314 12002 110912 88685 88685 1 ELVSDANQHVK Unmodified 1238.6255 0.62551466 1271 P30153 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.14 3.31 5 2 22 3 3 1 2 2 2 2 2 2 2 1 1 2 2 2 21.296 20.377 2;3 1.7147E-11 25166 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 157.68 124.13 2369500000 112980000 1127900000 52210000 69654000 67278000 104610000 73052000 69636000 37957000 140020000 51410000 47851000 130560000 136240000 148210000 13136 1271 12003 110913;110914;110915;110916;110917;110918;110919;110920;110921;110922;110923;110924;110925;110926;110927;110928;110929;110930;110931;110932;110933;110934;110935;110936;110937;110938;110939;110940;110941 88686;88687;88688;88689;88690;88691;88692;88693;88694;88695;88696;88697;88698;88699;88700;88701;88702;88703;88704;88705;88706;88707;88708;88709;88710;88711;88712;88713;88714;88715;88716 88700 22 ELVSDTNQHVK Unmodified 1268.6361 0.63607935 1272 P30154 PPP2R1B Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7 3.8 4 1 8 3 2 1 1 1 1 1 1 1 1 19.274 18.124 2;3 1.1772E-08 23896 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 172.94 99.691 240870000 0 216350000 6869700 0 0 2272500 1083900 0 0 2406200 1981800 2503900 1710300 2138500 3547600 13137 1272 12004 110942;110943;110944;110945;110946;110947;110948;110949;110950;110951;110952;110953;110954 88717;88718;88719;88720;88721;88722;88723;88724;88725;88726;88727 88721 9 ELVSSSSSGSDSDSEVDKK Unmodified 1941.8651 0.86508883 1730 P53999 SUB1 Activated RNA polymerase II transcriptional coactivator p15 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 22.542 18.656 3 0.00090277 24723 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 46.131 30.012 8590100 0 8590100 0 0 0 0 0 0 0 0 0 0 0 0 0 13138 1730 12005 110955;110956 88728 88728 1 ELVTIIPNFSLDK Unmodified 1487.8235 0.82354577 5082 Q9Y248 GINS2 DNA replication complex GINS protein PSF2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.08 3.33 2 1 9 2 1 1 1 1 1 1 1 1 1 1 92.478 91.704 2 8.2599E-10 109560 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 115.18 70.014 97842000 0 79180000 1669700 0 0 1117700 1286500 1244100 1174700 2360700 2129600 1378400 0 1249400 5051800 13139 5082 12006 110957;110958;110959;110960;110961;110962;110963;110964;110965;110966;110967;110968 88729;88730;88731;88732;88733;88734;88735;88736;88737;88738;88739;88740;88741 88736 13 ELVTLRAQK Unmodified 1056.6291 0.62914348 1704 P52888 THOP1 Thimet oligopeptidase yes yes 0 0 1 By MS/MS 2 0 1 1 42 35.265 2 8.6152E-08 48674 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 197.5 89.413 71015000 71015000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13140 1704 12007 110969 88742 88742 0 ELVTQQLPHLLK Unmodified 1417.8293 0.82929985 4029 Q99584 S100A13 Protein S100-A13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.23 3.81 9 17 5 2 2 1 1 1 1 2 1 1 2 2 1 2 2 78.66 76.917 2;3 3.1563E-37 98968 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 232.88 151.29 2126700000 1230400000 517250000 100600000 2448200 2364200 8369600 5130500 8132800 6860300 9626100 27375000 32682000 6042400 29964000 139440000 13141 4029 12008 110970;110971;110972;110973;110974;110975;110976;110977;110978;110979;110980;110981;110982;110983;110984;110985;110986;110987;110988;110989;110990;110991;110992;110993;110994;110995 88743;88744;88745;88746;88747;88748;88749;88750;88751;88752;88753;88754;88755 88749 11 ELVVTQLGYDTR Unmodified 1392.7249 0.72489436 2064 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.866 71.935 2 9.3082E-27 82494 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 169.37 143.8 492440000 0 0 0 16641000 30810000 30658000 29247000 51678000 21452000 50810000 45620000 63550000 31794000 42691000 77491000 13142 2064 12009 110996;110997;110998;110999;111000;111001;111002;111003;111004;111005;111006;111007 88756;88757;88758;88759;88760;88761;88762;88763;88764;88765;88766;88767 88765 12 ELVYPPDYNPEGK Unmodified 1519.7195 0.71947463 973 P12956 XRCC6 X-ray repair cross-complementing protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.22 1 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 67.02 66.578 2 4.2937E-13 93799 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 121.61 90.995 820140000 66201000 19245000 0 33446000 33492000 51306000 52501000 34871000 34437000 71186000 79195000 87403000 61424000 68403000 127030000 13143 973 12010 111008;111009;111010;111011;111012;111013;111014;111015;111016;111017;111018;111019;111020;111021;111022 88768;88769;88770;88771;88772;88773;88774;88775;88776;88777;88778;88779;88780;88781;88782;88783;88784;88785;88786;88787;88788;88789;88790;88791;88792;88793;88794;88795;88796;88797;88798;88799;88800 88782 33 ELWNLLK Unmodified 914.52255 0.52255314 227 O14920 IKBKB Inhibitor of nuclear factor kappa-B kinase subunit beta yes yes 0 0 0 By MS/MS 2 0 1 1 89.878 81.747 2 0.03098 106180 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 91.093 62.565 7817900 7817900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13144 227 12011 111023 88801 88801 1 ELWVCEGGGVTR Unmodified 1361.6398 0.63978452 4653 Q9NUQ8 ABCF3 ATP-binding cassette sub-family F member 3 yes yes 0 0 0 By MS/MS 10 0 1 1 62.957 63.529 2 0.012002 71930 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.974 53.59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13145 4653 12012 111024 88802 88802 1 ELYADFIAAQIK Unmodified 1380.7289 0.7289171 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 86.329 86.431 2 0.0029765 99945 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.65 39.564 3921100 0 0 0 0 0 1148600 0 0 0 0 0 0 0 0 2772500 13146 5189 12013 111025;111026 88803 88803 1 ELYAWDNRR Unmodified 1221.5891 0.58906958 457 O75128 COBL Protein cordon-bleu yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 2 1 42.337 42.541 3 0.005616 46446 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.603 29.435 33625000 0 0 0 0 3034600 4101000 0 0 3663200 0 4622700 0 0 8307600 9896100 13147 457 12014 111027;111028;111029;111030;111031;111032;111033 88804;88805 88804 2 ELYENFCK Unmodified 1101.4801 0.48009598 2869 Q6DD88 ATL3 Atlastin-3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 47.136 47.366 2 0.03349 53116 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 53.679 44.286 30402000 0 0 0 3758900 0 3756700 4271900 0 3913000 0 4859400 5398100 0 0 4444400 13148 2869 12015 111034;111035;111036;111037;111038;111039;111040 88806;88807;88808 88806 3 ELYFYEEK Unmodified 1119.5124 0.51244197 1607 P49848 TAF6 Transcription initiation factor TFIID subunit 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 59.759 59.885 2 0.011003 67892 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 77.923 50.668 21119000 0 0 0 0 2222200 0 2164400 2293400 2015600 2756500 0 4250900 3118400 2297900 0 13149 1607 12016 111041;111042;111043;111044;111045;111046;111047;111048 88809;88810;88811;88812 88812 4 ELYGQVLYR Unmodified 1139.5975 0.597509 578 O76094 SRP72 Signal recognition particle subunit SRP72 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.079 62.178 2 0.0033124 71937 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 110.63 68.981 210330000 0 0 0 9934900 10625000 19305000 14761000 18382000 11281000 19462000 25016000 26553000 17598000 12281000 25130000 13150 578 12017 111049;111050;111051;111052;111053;111054;111055;111056;111057;111058;111059;111060 88813;88814;88815;88816;88817;88818;88819;88820;88821;88822;88823;88824;88825 88824 13 ELYGVGVEK Unmodified 992.51786 0.51786169 1425 P40938 RFC3 Replication factor C subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.452 43.627 2 0.005064 48905 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 84.743 29.957 279850000 0 0 0 15934000 14797000 20734000 16354000 24156000 16933000 22578000 27134000 41899000 25537000 19840000 33957000 13151 1425 12018 111061;111062;111063;111064;111065;111066;111067;111068;111069;111070;111071;111072 88826;88827;88828;88829;88830;88831;88832;88833;88834;88835;88836;88837;88838 88833 13 ELYLSSSLK Unmodified 1038.5597 0.55972651 1420 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 65.105 59.114 2 0.0039447 75985 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.89 95.048 125580000 5575300 118140000 1866600 0 0 0 0 0 0 0 0 0 0 0 0 13152 1420 12019 111073;111074;111075 88839 88839 1 ELYRACAVEVK Unmodified 1336.6809 0.68092105 3580 Q8WX92 NELFB Negative elongation factor B yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 46.642 40.844 3 0.01093 51302 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 46.063 31.501 32953000 8000500 0 24953000 0 0 0 0 0 0 0 0 0 0 0 0 13153 3580 12020 111076;111077 88840 88840 1 ELYSQLGEK Unmodified 1065.5342 0.53424004 3580 Q8WX92 NELFB Negative elongation factor B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 41.065 40.502 2 0.0053328 50684 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.12 70.822 419230000 0 124630000 0 16716000 14882000 26858000 19423000 17766000 19175000 25281000 27857000 35554000 31535000 21914000 37644000 13154 3580 12021 111078;111079;111080;111081;111082;111083;111084;111085;111086;111087;111088;111089;111090;111091 88841;88842;88843;88844;88845;88846;88847;88848;88849;88850;88851;88852;88853 88844 11 ELYSSGEFSSGRK Unmodified 1445.6787 0.67867245 3871 Q96HW7 INTS4 Integrator complex subunit 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 35.132 35.41 3 0.0023628 39154 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 45.825 32.146 88966000 0 0 0 0 7872500 0 10008000 7288300 0 12444000 11384000 7618800 8591200 10911000 12848000 13155 3871 12022 111092;111093;111094;111095;111096;111097;111098;111099;111100 88854;88855;88856;88857;88858;88859;88860;88861;88862 88860 9 ELYTDNQHLK Unmodified 1259.6146 0.61461563 3992 Q96SN8 CDK5RAP2 CDK5 regulatory subunit-associated protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 31.38 26.928 3 0.015884 35230 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 51.276 35.313 8858100 0 8858100 0 0 0 0 0 0 0 0 0 0 0 0 0 13156 3992 12023 111101 88863 88863 1 ELYTHLCDVVDK Unmodified 1490.7075 0.70752973 297 O43149 ZZEF1 Zinc finger ZZ-type and EF-hand domain-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 66.74 62.997 3 0.013886 78044 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 45.257 37.533 2361900 0 0 2361900 0 0 0 0 0 0 0 0 0 0 0 0 13157 297 12024 111102 88864 88864 1 ELYTMMTDK Oxidation (M) 1146.4937 0.49369713 1420 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 yes yes 0 1 0 By MS/MS 2 0 2 2 42.557 37.435 2 0.021732 48440 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.856 64.685 31357000 0 31357000 0 0 0 0 0 0 0 0 0 0 0 0 0 13158 1420 12025 111103;111104 88865;88866 88865 2 ELYTVVQHVK Unmodified 1214.6659 0.66592292 3107 Q7Z5K2 WAPAL Wings apart-like protein homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 48.943 47.576 2;3 0.0092374 63985 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 52.549 46.228 222920000 108230000 20075000 50180000 0 0 5125700 0 0 2214700 6540000 6105700 5191400 5450600 5170400 8635000 13159 3107 12026 111105;111106;111107;111108;111109;111110;111111;111112;111113;111114;111115 88867;88868;88869;88870 88867 4 ELYVPENK Unmodified 990.50221 0.50221163 310 O43252 PAPSS1 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 37.264 36.44 2 0.0079876 40529 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 87.754 26.955 383240000 0 328080000 0 4042600 3483500 0 0 0 3212800 4910000 0 11054000 5989900 7712700 14759000 13160 310 12027 111116;111117;111118;111119;111120;111121;111122;111123;111124;111125 88871;88872;88873;88874;88875;88876;88877;88878;88879 88876 8 ELYYFGVK Unmodified 1017.5171 0.51713341 3431 Q8NEX9 SDR9C7 Short-chain dehydrogenase/reductase family 9C member 7 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 72.232 72.036 2 0.04249 83780 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 49.59 24.958 4751100 0 0 0 3513300 0 0 0 1237800 0 0 0 0 0 0 0 13161 3431 12028 111126;111127 88880 88880 1 ELYYHGEPLNVNVHVTNNSTK Unmodified 2427.1819 0.18188713 1318 P32121 ARRB2 Beta-arrestin-2 yes yes 0 0 0 By MS/MS 10 0 1 1 32.029 32.745 4 0.02918 34909 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 21.599 0.39851 6099300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6099300 13162 1318 12029 111128 88881 88881 1 EMAAAPPGR Unmodified 898.43309 0.43308621 3348 Q8N5I9 C12orf45 Uncharacterized protein C12orf45 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 19.498 19.69 2 0.0052447 19802 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 79.116 56.985 29814000 0 0 0 2005000 1872000 0 1654700 2163200 1561600 3736400 0 4893600 4004600 2128100 5795000 13163 3348 12030 111129;111130;111131;111132;111133;111134;111135;111136;111137;111138 88882;88883;88884;88885;88886;88887;88888;88889 88888 7 EMAAAPPGRFNIENIDGPHSK Unmodified 2250.0851 0.085149973 3348 Q8N5I9 C12orf45 Uncharacterized protein C12orf45 yes yes 0 0 1 By MS/MS 2 0 1 1 75.263 67.133 4 0.00050959 88676 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.353 40.501 25478000 25478000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13164 3348 12031 111139 88890 88890 1 EMACPYSVLISGDIK Oxidation (M) 1697.8004 0.80044384 2693 Q52LJ0 FAM98B Protein FAM98B yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 81.055 81.127 2 3.1474E-11 93811 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 97.911 79.166 61177000 0 0 0 0 5306000 9167000 0 0 7258300 8996300 0 11473000 0 6624500 12352000 13165 2693 12032 111140;111141;111142;111143;111144;111145;111146 88891;88892;88893;88894;88895;88896;88897;88898 88892 4346 8 EMACPYSVLISGDIK Unmodified 1681.8055 0.80552922 2693 Q52LJ0 FAM98B Protein FAM98B yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 87.73 84.224 2 2.634E-06 104607 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.36 109.1 182510000 0 180330000 2178800 0 0 0 0 0 0 0 0 0 0 0 0 13166 2693 12032 111147;111148;111149 88899;88900;88901 88899 3 EMAEAYLGMPVANAVISVPAEFDLK Unmodified 2664.3179 0.31791161 1550 P48723 HSPA13 Heat shock 70 kDa protein 13 yes yes 0 0 0 By MS/MS 2 0 1 1 100.38 95.668 3 0.013823 118236 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 23.74 16.866 13575000 0 13575000 0 0 0 0 0 0 0 0 0 0 0 0 0 13167 1550 12033 111150 88902 88902 1 EMAEDDDDSFP Oxidation (M) 1285.4292 0.4292422 308 O43242 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 0 1 0 By MS/MS 1 0 1 1 101.84 107.1 2 0.01108 86886 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 111.01 111.01 6533400 6533400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13168 308 12034 111151 88903 88903 398 0 EMAEERAESLQQEVEALK Unmodified 2088.9997 0.99974859 2391 Q14203 DCTN1 Dynactin subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 80.279 75.124 3 0.00062972 96014 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.712 42.224 65384000 20907000 39871000 4606600 0 0 0 0 0 0 0 0 0 0 0 0 13169 2391 12035 111152;111153;111154 88904;88905 88905 1 EMAEERAESLQQEVEALK Oxidation (M) 2104.9947 0.99466321 2391 Q14203 DCTN1 Dynactin subunit 1 yes yes 0 1 1 By MS/MS 2 0 1 1 78.945 70.814 3 0.00022494 92977 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.374 52.759 26806000 26806000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13170 2391 12035 111155 88906 88906 3887 1 EMAHGSQEAEAPGAVAGAAEVPREPPILPR Oxidation (M) 3052.5036 0.50363197 3225 Q8IVD9 NUDCD3 NudC domain-containing protein 3 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 73.42 73.594 4 1.0475E-14 84689 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 49.088 46.775 76769000 0 0 0 0 0 16725000 0 0 0 0 19379000 0 17206000 0 23459000 13171 3225 12036 111156;111157;111158;111159 88907;88908;88909;88910 88907 4840 4 EMAHGSQEAEAPGAVAGAAEVPREPPILPR Unmodified 3036.5087 0.50871735 3225 Q8IVD9 NUDCD3 NudC domain-containing protein 3 yes yes 0 0 1 By MS/MS 10 0 1 1 74.324 74.664 4 0.00011367 85560 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 27.863 25.61 13636000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13636000 13172 3225 12036 111160 88911 88911 1 EMAINDCSK Unmodified 1066.4423 0.44233027 4034 Q99614 TTC1 Tetratricopeptide repeat protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 19.907 19.486 2 0.00035348 23779 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.56 81.847 54290000 0 37613000 0 0 0 0 0 0 0 0 4403800 0 2265100 3227900 6780200 13173 4034 12037 111161;111162;111163;111164;111165;111166 88912;88913;88914;88915;88916 88913 5 EMAINDCSK Oxidation (M) 1082.4372 0.43724489 4034 Q99614 TTC1 Tetratricopeptide repeat protein 1 yes yes 0 1 0 By matching By MS/MS 10 0 2 1 1 8.1251 8.4178 2 0.014983 6010 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.346 37.189 3112000 0 0 0 0 0 0 0 0 0 0 0 0 0 1205700 1906300 13174 4034 12037 111167;111168 88917 88917 5536 1 EMAIPVLEAR Unmodified 1127.6009 0.60087982 1749 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 0 0 0 By MS/MS 10 0 1 1 78.597 78.843 2 0.012507 90702 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.598 54.816 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13175 1749 12038 111169 88918 88918 1 EMALLATSLPEGIMVK 2 Oxidation (M) 1733.8943 0.89434423 4287 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 83.55 83.679 2 1.368E-28 97227 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 137.17 102.64 39368000 0 0 0 0 0 7127800 5264700 6118000 0 0 0 0 5953300 5840600 9063200 13176 4287 12039 111170;111171;111172;111173;111174;111175 88919;88920;88921;88922;88923;88924;88925 88925 5750;5751 7 EMALLATSLPEGIMVK Oxidation (M) 1717.8994 0.8994296 4287 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O yes yes 0 1 0 By MS/MS By MS/MS 5.4 3.77 2 1 2 3 2 91.488 88.268 2 4.2775E-62 109015 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 186.02 166.78 75215000 0 73283000 0 0 0 0 0 0 0 0 0 0 0 0 1931700 13177 4287 12039 111176;111177;111178;111179;111180 88926;88927;88928;88929 88926 5750;5751 4 EMAPVPGTTTTTTSVK Oxidation (M) 1635.8026 0.80255233 463 O75150 RNF40 E3 ubiquitin-protein ligase BRE1B yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.17 39.35 2 1.1672E-20 43425 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 112.43 94.994 152160000 0 0 0 11634000 9616600 8736500 15409000 10550000 10308000 12257000 14866000 16663000 14259000 12532000 15333000 13178 463 12040 111181;111182;111183;111184;111185;111186;111187;111188;111189;111190;111191;111192 88930;88931;88932;88933;88934;88935;88936;88937;88938;88939;88940;88941 88938 588 11 EMAPVPGTTTTTTSVK Unmodified 1619.8076 0.80763771 463 O75150 RNF40 E3 ubiquitin-protein ligase BRE1B yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.999 48.162 2 7.5478E-32 54471 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 138.94 117.47 241330000 0 0 0 10980000 11023000 17597000 13138000 16434000 13357000 23722000 28448000 26039000 20222000 16967000 43399000 13179 463 12040 111193;111194;111195;111196;111197;111198;111199;111200;111201;111202;111203;111204 88942;88943;88944;88945;88946;88947;88948;88949;88950;88951 88942 6 EMASLSAAAITVPPSVPSR Oxidation (M) 1898.9772 0.97716265 417 O60610 DIAPH1 Protein diaphanous homolog 1 yes yes 0 1 0 By MS/MS 10 0 1 1 78.024 77.712 2 0.0053433 89882 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 41.644 35.802 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13180 417 12041 111205 88952 88952 519 1 EMATISEDVIIVTSSLTK Unmodified 1936.0075 0.0074597284 4839 Q9UBF2 COPG2 Coatomer subunit gamma-2 yes yes 0 0 0 By MS/MS 2 0 1 1 98.441 90.311 3 0.0013559 116490 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 31.04 21.877 7725300 7725300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13181 4839 12042 111206 88953 88953 0 EMCDVEQVLSK Oxidation (M) 1352.5952 0.59520209 632 O95239 KIF4A Chromosome-associated kinesin KIF4A yes yes 0 1 0 By MS/MS 2 0 1 1 54.361 48.556 2 0.007278 62930 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.893 50.113 7999600 0 7999600 0 0 0 0 0 0 0 0 0 0 0 0 0 13182 632 12043 111207 88954 88954 772 1 EMDDFLQK Unmodified 1024.4535 0.45354688 272 O15305 PMM2 Phosphomannomutase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.8 3.92 2 3 1 1 1 1 1 56.162 52.912 2 0.0025595 67544 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.65 82.407 435670000 16503000 388470000 0 0 0 0 0 0 0 0 8394000 0 0 0 22303000 13183 272 12044 111208;111209;111210;111211;111212 88955;88956;88957;88958;88959;88960;88961 88956 7 EMDDFLQK Oxidation (M) 1040.4485 0.4484615 272 O15305 PMM2 Phosphomannomutase 2 yes yes 0 1 0 By MS/MS 3 0 1 1 40.525 35.823 2 0.042364 44666 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 66.993 46.438 12310000 0 12310000 0 0 0 0 0 0 0 0 0 0 0 0 0 13184 272 12044 111213 88962 88962 1 EMDDPSVGPK Unmodified 1073.4699 0.46992522 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 25.997 26.198 2 0.016645 28189 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 49.418 30.642 81517000 0 0 0 5108300 6104700 5426900 6805000 5496300 5039600 5863500 7277400 9600200 6839600 9921200 8034100 13185 2290 12045 111214;111215;111216;111217;111218;111219;111220;111221;111222;111223;111224;111225 88963;88964;88965;88966 88963 2 EMDDPSVGPK Oxidation (M) 1089.4648 0.46483985 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 16.078 16.222 2 0.0077159 15704 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 53.756 46.276 92680000 0 0 0 6364600 6716700 5991400 9404700 7793800 6759000 0 0 16220000 8737500 13645000 11047000 13186 2290 12045 111226;111227;111228;111229;111230;111231;111232;111233;111234;111235 88967;88968;88969;88970;88971;88972;88973;88974;88975 88972 3732 9 EMDEAATAEER Oxidation (M) 1266.5034 0.5034102 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 11.244 11.392 2 1.0122E-07 9105 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 147.2 131 1168100000 0 0 0 128900000 64723000 91314000 81544000 91784000 74951000 102890000 65067000 155210000 126980000 93407000 91346000 13187 2102 12046 111236;111237;111238;111239;111240;111241;111242;111243;111244;111245;111246;111247 88976;88977;88978;88979;88980;88981;88982;88983;88984;88985;88986;88987;88988 88983 3402 13 EMDEAATAEER Unmodified 1250.5085 0.50849557 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.038 20.239 2 1.4114E-05 19741 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 157.96 137.33 1437400000 0 0 0 82637000 87924000 84493000 76273000 106840000 69285000 154910000 157380000 188920000 104480000 114660000 209560000 13188 2102 12046 111248;111249;111250;111251;111252;111253;111254;111255;111256;111257;111258;111259 88989;88990;88991;88992;88993;88994;88995;88996;88997;88998;88999;89000;89001;89002 88993 14 EMDEAATAEERGR Oxidation (M) 1479.626 0.62598495 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 10.982 11.111 3 0.00031793 7625 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 67.997 57.387 526150000 0 0 0 33348000 27978000 42043000 72465000 50037000 0 49578000 48772000 90393000 0 46784000 64754000 13189 2102 12047 111260;111261;111262;111263;111264;111265;111266;111267;111268;111269 89003;89004;89005;89006;89007;89008;89009;89010;89011;89012 89007 3402 8 EMDEAATAEERGR Unmodified 1463.6311 0.63107033 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 1 2 2 2 2 2 2 2 2 2 18.841 19.046 2;3 1.0251E-31 18991 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 169.65 158.5 610800000 0 0 0 38368000 30392000 31713000 38768000 49719000 36551000 78970000 51687000 77658000 52754000 42573000 81648000 13190 2102 12047 111270;111271;111272;111273;111274;111275;111276;111277;111278;111279;111280;111281;111282;111283;111284;111285;111286;111287;111288;111289;111290;111291;111292 89013;89014;89015;89016;89017;89018;89019;89020;89021;89022;89023;89024;89025 89023 11 EMDEAATAEERGRLK Oxidation (M) 1720.805 0.80501195 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 1 2 By MS/MS By MS/MS 2 0 4 2 2 25.911 21.736 3;4 3.1454E-05 27614 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 97.69 85.666 324800000 100740000 0 224060000 0 0 0 0 0 0 0 0 0 0 0 0 13191 2102 12048 111293;111294;111295;111296 89026;89027;89028;89029;89030 89029 3402 3 EMDEAATAEERGRLK Unmodified 1704.8101 0.81009732 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 2 By MS/MS By MS/MS 2 0 4 2 2 34.666 29.798 3;4 0.001459 38055 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 59.709 53.805 146530000 72342000 0 74187000 0 0 0 0 0 0 0 0 0 0 0 0 13192 2102 12048 111297;111298;111299;111300 89031;89032;89033;89034 89033 0 EMDKSVQTEK Unmodified 1193.5598 0.55980286 5099 Q9Y2F5 ICE1 Little elongation complex subunit 1 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 24.265 24.178 3 0.034084 25136 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 29.743 11.924 26630000 0 0 0 0 9451500 0 0 0 0 17179000 0 0 0 0 0 13193 5099 12049 111301;111302 89035;89036 89035 2 EMDNFLAQMEAK 2 Oxidation (M) 1457.6167 0.61666582 3596 Q8WXX5 DNAJC9 DnaJ homolog subfamily C member 9 yes yes 0 2 0 By MS/MS 10 0 1 1 45.482 45.646 2 0.013377 51315 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 51.268 27.914 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13194 3596 12050 111303 89037 89037 5094;5095 1 EMDNFLAQMEAK Oxidation (M) 1441.6218 0.62175119 3596 Q8WXX5 DNAJC9 DnaJ homolog subfamily C member 9 yes yes 0 1 0 By MS/MS 2 0 1 1 64.143 58.236 2 0.0048885 74678 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.922 61.758 11589000 0 11589000 0 0 0 0 0 0 0 0 0 0 0 0 0 13195 3596 12050 111304 89038;89039 89039 5094;5095 2 EMDNFLAQMEAK Unmodified 1425.6268 0.62683657 3596 Q8WXX5 DNAJC9 DnaJ homolog subfamily C member 9 yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 81.373 80.678 2 0.0072742 99885 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.656 85.065 99130000 0 80395000 0 0 0 2725600 0 0 0 0 0 3097800 2413600 2378300 8119200 13196 3596 12050 111305;111306;111307;111308;111309;111310 89040;89041 89040 2 EMDQLPVHSIK Unmodified 1295.6544 0.65437195 4973 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.82 3.56 3 8 2 1 1 1 1 1 1 1 1 1 53.167 51.786 2;3 0.0007077 68005 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.257 84.742 197400000 0 118300000 5763500 6747700 5789100 9677500 4098500 5456900 0 0 0 0 13130000 10229000 18212000 13197 4973 12051 111311;111312;111313;111314;111315;111316;111317;111318;111319;111320;111321 89042;89043;89044;89045;89046;89047 89044 4 EMDQLPVHSIK Oxidation (M) 1311.6493 0.64928657 4973 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 yes yes 0 1 0 By MS/MS By matching 2 0 2 1 1 46.547 41.858 2 0.021605 54941 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 56.013 25.759 28201000 0 26320000 1880900 0 0 0 0 0 0 0 0 0 0 0 0 13198 4973 12051 111322;111323 89048 89048 1 EMDRETLIDVAR Oxidation (M) 1462.7086 0.70859237 1410 P40227 CCT6A T-complex protein 1 subunit zeta yes yes 0 1 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 1 1 2 1 1 1 2 49.325 49.543 2;3 0.00014602 54916 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 80.17 70.118 1288900000 0 0 0 54998000 53745000 157250000 109450000 46005000 98464000 112230000 165420000 119520000 88043000 90527000 193290000 13199 1410 12052 111324;111325;111326;111327;111328;111329;111330;111331;111332;111333;111334;111335;111336;111337 89049;89050;89051;89052;89053;89054;89055;89056;89057;89058;89059;89060;89061;89062 89059 2210 13 EMDRETLIDVAR Unmodified 1446.7137 0.71367774 1410 P40227 CCT6A T-complex protein 1 subunit zeta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 25 2 2 2 2 2 2 2 2 2 3 2 2 58.328 58.447 2;3 0.00017391 67023 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 83.314 70.688 583290000 0 0 0 25268000 22061000 48382000 29894000 43034000 26346000 54112000 66850000 59260000 40844000 47556000 119690000 13200 1410 12052 111338;111339;111340;111341;111342;111343;111344;111345;111346;111347;111348;111349;111350;111351;111352;111353;111354;111355;111356;111357;111358;111359;111360;111361;111362 89063;89064;89065;89066;89067;89068;89069;89070;89071;89072;89073;89074;89075;89076;89077;89078;89079 89064 15 EMDVVSQHK Unmodified 1071.5019 0.50189405 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 20.268 16.118 2 0.027603 21125 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.05 91.899 78562000 4967800 73594000 0 0 0 0 0 0 0 0 0 0 0 0 0 13201 3641 12053 111363;111364 89080 89080 0 EMDVVSQHK Oxidation (M) 1087.4968 0.49680868 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.83 2.61 2 10 1 1 1 1 1 1 1 1 1 1 1 1 7.3502 6.8303 2 0.0055125 5435 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 69.825 57.68 33343000 173550 6006200 0 1483800 2201300 3369700 1985800 2557100 2889300 3257300 0 2067000 3498500 3853700 0 13202 3641 12053 111365;111366;111367;111368;111369;111370;111371;111372;111373;111374;111375;111376 89081;89082;89083 89083 5147 3 EMEADERDR Unmodified 1149.4721 0.47205049 1596 P49756 RBM25 RNA-binding protein 25 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 6.6418 6.7598 3 0.0082144 4665 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 61.65 54.004 41679000 0 0 0 6193600 5286900 0 9208300 7096800 1789200 3189000 0 0 2275600 2658600 3980500 13203 1596 12054 111377;111378;111379;111380;111381;111382;111383;111384;111385 89084;89085;89086;89087;89088 89084 5 EMEAELEDERK Oxidation (M) 1393.6031 0.60312424 1356 P35579 MYH9 Myosin-9 yes yes 0 1 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.71 1.4 1 23 1 1 2 2 2 2 2 2 2 2 2 2 2 15.955 15.978 2;3 1.4998E-13 15567 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 145.9 144.84 1897500000 0 7403900 0 19133000 99420000 180290000 143520000 88077000 104850000 164220000 220200000 316040000 231570000 143780000 179030000 13204 1356 12055 111386;111387;111388;111389;111390;111391;111392;111393;111394;111395;111396;111397;111398;111399;111400;111401;111402;111403;111404;111405;111406;111407;111408;111409 89089;89090;89091;89092;89093;89094;89095;89096;89097;89098;89099;89100;89101;89102;89103;89104;89105;89106;89107;89108;89109;89110;89111;89112 89110 2075 20 EMEAELEDERK Unmodified 1377.6082 0.60820962 1356 P35579 MYH9 Myosin-9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 28.49 28.685 2;3 8.6095E-73 30851 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 192.26 145.44 5085700000 0 0 0 258640000 291140000 406630000 352150000 324120000 243760000 484240000 711530000 723190000 387520000 402320000 500460000 13205 1356 12055 111410;111411;111412;111413;111414;111415;111416;111417;111418;111419;111420;111421;111422;111423;111424;111425;111426;111427;111428;111429;111430;111431;111432;111433 89113;89114;89115;89116;89117;89118;89119;89120;89121;89122;89123;89124;89125;89126;89127;89128;89129;89130;89131 89116 16 EMEAELNSTMK Unmodified 1281.5581 0.5580883 2714 Q56P03 EAPP E2F-associated phosphoprotein yes yes 0 0 0 By MS/MS 2 0 1 1 47.502 41.939 2 7.6311E-13 54535 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 158.76 114.31 31400000 0 31400000 0 0 0 0 0 0 0 0 0 0 0 0 0 13206 2714 12056 111434 89132 89132 1 EMEAQQAALDPALK Unmodified 1513.7446 0.74464352 1406 P39880 CUX1 Homeobox protein cut-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 58.721 58.891 2 7.0868E-12 66911 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 126.19 109.97 48424000 0 0 0 3366000 0 4524700 4156100 0 1974700 4659600 5147400 4477400 4337000 5315500 10466000 13207 1406 12057 111435;111436;111437;111438;111439;111440;111441;111442;111443;111444;111445 89133;89134;89135;89136;89137;89138;89139;89140;89141;89142;89143 89138 11 EMEAQQAALDPALK Oxidation (M) 1529.7396 0.73955814 1406 P39880 CUX1 Homeobox protein cut-like 1 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 2 1 1 1 1 49.473 49.535 2 2.9418E-06 56411 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 92.866 76.976 22478000 0 0 0 0 0 7844700 14633000 0 0 0 0 0 0 0 0 13208 1406 12057 111446;111447;111448;111449;111450;111451 89144;89145;89146;89147;89148 89147 2193 5 EMEEATASAQR Unmodified 1221.5296 0.52956537 4805 Q9P253 VPS18 Vacuolar protein sorting-associated protein 18 homolog yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 14.736 14.821 2 0.01408 14185 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 61.78 32.618 27338000 0 0 0 0 0 13068000 1935900 0 9348400 0 0 0 2986200 0 0 13209 4805 12058 111452;111453;111454;111455;111456;111457;111458 89149;89150;89151;89152 89150 4 EMEEATASAQR Oxidation (M) 1237.5245 0.52447999 4805 Q9P253 VPS18 Vacuolar protein sorting-associated protein 18 homolog yes yes 0 1 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 7.1557 7.4006 2 0.008873 5874 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 65.347 53.857 6910800 0 0 0 0 0 0 0 0 0 1498800 5411900 0 0 0 0 13210 4805 12058 111459;111460;111461 89153;89154 89153 6163 2 EMEEELVPTGSEPGDTR Oxidation (M) 1890.8153 0.81530186 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 49.969 50.066 2 1.1203E-55 55548 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 149.38 117.32 121620000 0 0 0 9892300 8684700 20548000 8072900 9535700 0 11865000 13458000 0 12980000 11856000 14726000 13211 4285 12059 111462;111463;111464;111465;111466;111467;111468;111469;111470;111471;111472 89155;89156;89157;89158;89159;89160;89161;89162;89163;89164;89165 89158 5744 10 EMEEELVPTGSEPGDTR Unmodified 1874.8204 0.82038724 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.059 59.169 2 5.3315E-36 66636 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 126.12 114.54 107390000 0 0 0 5529800 5242700 5252700 5499200 7219300 4394000 9360400 11302000 19995000 7408400 9786000 16405000 13212 4285 12059 111473;111474;111475;111476;111477;111478;111479;111480;111481;111482;111483;111484 89166;89167;89168;89169;89170;89171;89172;89173;89174;89175;89176;89177;89178 89170 13 EMEENFAVEAANYQDTIGR Oxidation (M) 2201.9535 0.95352668 870 P08670 VIM Vimentin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 76.241 76.299 2;3 0 87992 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 265.95 258.4 5072800000 0 0 0 147920000 391840000 385780000 378340000 322880000 364360000 547280000 591290000 716080000 341910000 386080000 499070000 13213 870 12060 111485;111486;111487;111488;111489;111490;111491;111492;111493;111494;111495;111496;111497;111498;111499;111500;111501;111502;111503;111504;111505;111506;111507;111508 89179;89180;89181;89182;89183;89184;89185;89186;89187;89188;89189;89190;89191 89181 1116 12 EMEENFAVEAANYQDTIGR Unmodified 2185.9586 0.95861206 870 P08670 VIM Vimentin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 1 2 2 2 2 2 2 2 2 2 2 2 79.525 79.628 2;3 1.9129E-299 91713 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 318.49 306.23 520900000 0 0 0 0 35196000 35284000 11100000 39439000 21029000 77832000 63329000 60861000 12854000 23065000 140910000 13214 870 12060 111509;111510;111511;111512;111513;111514;111515;111516;111517;111518;111519;111520;111521;111522;111523;111524;111525;111526;111527;111528;111529;111530;111531 89192;89193;89194;89195;89196;89197;89198;89199;89200;89201;89202;89203;89204;89205;89206 89196 15 EMEEPFEK Oxidation (M) 1053.4325 0.43247709 1285 P30566 ADSL Adenylosuccinate lyase yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 6.17 3.85 2 1 3 1 2 1 1 1 27.482 25.292 2 0.010577 31988 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.37 85.583 182060000 24984000 142160000 0 0 0 0 1996900 0 0 0 4637900 0 0 0 8283100 13215 1285 12061 111532;111533;111534;111535;111536;111537 89207;89208;89209;89210;89211;89212 89209 1887 6 EMEEPFEK Unmodified 1037.4376 0.43756246 1285 P30566 ADSL Adenylosuccinate lyase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 40.446 38.817 2 0.018283 43543 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 64.567 57.417 227370000 15714000 180480000 0 0 0 0 0 0 0 0 6817100 6984500 0 3249300 14122000 13216 1285 12061 111538;111539;111540;111541;111542;111543 89213;89214;89215 89214 2 EMEEQMR Unmodified 951.379 0.37900173 1151 P23246 SFPQ Splicing factor, proline- and glutamine-rich yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 14.236 14.425 2 0.023344 13921 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 91.584 57.846 27675000 0 0 0 0 1799800 1895200 2245900 2024500 1443300 2148900 3514300 2614100 2386100 3260200 4343000 13217 1151 12062 111544;111545;111546;111547;111548;111549;111550;111551;111552;111553;111554 89216;89217;89218 89216 3 EMELPAK Unmodified 816.40514 0.40514012 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS 2 0 1 1 36.991 32.076 2 0.041516 41927 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.939 17.225 21616000 0 21616000 0 0 0 0 0 0 0 0 0 0 0 0 0 13218 2501 12063 111555 89219 89219 1 EMENFEAPFHCLAK Unmodified 1721.7542 0.75416235 4204 Q9BW83 IFT27 Intraflagellar transport protein 27 homolog yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 79.676 76.006 3 0.00027779 94481 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 59.185 52.614 48728000 0 43443000 5285300 0 0 0 0 0 0 0 0 0 0 0 0 13219 4204 12064 111556;111557 89220 89220 1 EMENLWGIK Unmodified 1118.543 0.54303059 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 74.945 75.001 2 0.014024 86782 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 58.917 49.524 61490000 0 0 0 1687200 3594800 4539400 0 4576700 4329700 5978700 5486900 10542000 5631600 6701600 8422100 13220 3023 12065 111558;111559;111560;111561;111562;111563;111564;111565;111566;111567;111568 89221;89222;89223;89224;89225;89226;89227 89225 7 EMENLWGIK Oxidation (M) 1134.5379 0.53794521 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 63.765 63.822 2 0.010822 72424 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 56.547 33.807 60353000 0 0 0 3948000 5152900 0 4893800 5725600 5861400 6057400 5644300 8938000 8523300 5608600 0 13221 3023 12065 111569;111570;111571;111572;111573;111574;111575;111576;111577;111578 89228;89229;89230;89231;89232;89233 89233 4625 6 EMEQFVK Unmodified 909.4266 0.42660385 4880 Q9UGI8 TES Testin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 6.12 3.89 3 1 4 1 2 1 1 1 1 1 38.758 36.403 2 0.023118 39491 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 102.98 33.59 551390000 13601000 496230000 4662900 0 0 0 3530800 3085100 0 0 0 0 0 11063000 19221000 13222 4880 12066 111579;111580;111581;111582;111583;111584;111585;111586 89234;89235;89236 89235 3 EMEQFVK Oxidation (M) 925.42152 0.42151847 4880 Q9UGI8 TES Testin yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 21.342 21.92 2 0.039942 22464 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 54.525 9.9143 20413000 0 0 0 0 0 0 0 0 0 0 11191000 9222300 0 0 0 13223 4880 12066 111587;111588 89237;89238 89238 2 EMEQLVLDK Oxidation (M) 1119.5482 0.54817555 3732 Q96A49 SYAP1 Synapse-associated protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.53 2.94 1 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41.601 40.815 2 0.0022913 45506 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 103.8 68.448 534540000 1014800 7856100 4026900 29664000 33906000 31800000 48267000 29531000 33877000 42479000 59791000 55257000 61953000 38587000 56534000 13224 3732 12067 111589;111590;111591;111592;111593;111594;111595;111596;111597;111598;111599;111600;111601;111602;111603 89239;89240;89241;89242;89243;89244;89245;89246;89247;89248;89249;89250;89251;89252;89253;89254 89247 5300 16 EMEQLVLDK Unmodified 1103.5533 0.55326092 3732 Q96A49 SYAP1 Synapse-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56.757 55.665 2 0.00076393 71425 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.12 84.763 1024600000 15329000 211590000 3986800 41258000 38975000 38098000 56946000 74685000 36466000 76863000 87032000 75044000 69924000 64670000 133770000 13225 3732 12067 111604;111605;111606;111607;111608;111609;111610;111611;111612;111613;111614;111615;111616;111617;111618 89255;89256;89257;89258;89259;89260;89261;89262;89263;89264;89265;89266;89267;89268;89269;89270;89271;89272;89273 89261 17 EMESIDQYIER Oxidation (M) 1427.6239 0.62385968 4233 Q9BXS6 NUSAP1 Nucleolar and spindle-associated protein 1 yes yes 0 1 0 By MS/MS By matching 10 0 2 1 1 61.016 60.943 2 0.012489 69982 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 43.308 32.156 3547300 0 0 0 0 1869600 0 0 0 0 0 1677700 0 0 0 0 13226 4233 12068 111619;111620 89274 89274 5707 1 EMESIWNLQK Oxidation (M) 1292.6071 0.60708741 3091 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 yes yes 0 1 0 By MS/MS 2 0 1 1 70.695 64.878 2 0.0097433 82690 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.248 48.354 16785000 0 16785000 0 0 0 0 0 0 0 0 0 0 0 0 0 13227 3091 12069 111621 89275 89275 4696 1 EMETLVEAVNK Oxidation (M) 1277.6173 0.61731774 2221 Q12986 NFX1 Transcriptional repressor NF-X1 yes yes 0 1 0 By MS/MS 2 0 1 1 50.082 44.376 2 0.00072248 57729 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.692 75.597 12629000 0 12629000 0 0 0 0 0 0 0 0 0 0 0 0 0 13228 2221 12070 111622 89276 89276 3609 1 EMETLVEAVNK Unmodified 1261.6224 0.62240312 2221 Q12986 NFX1 Transcriptional repressor NF-X1 yes yes 0 0 0 By MS/MS 2 0 1 1 67.122 61.206 2 0.0095872 78274 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.962 46.442 40692000 0 40692000 0 0 0 0 0 0 0 0 0 0 0 0 0 13229 2221 12070 111623 89277 89277 1 EMETPLSALGIQDGCR Oxidation (M) 1791.8131 0.81313379 4070 Q99933 BAG1 BAG family molecular chaperone regulator 1 yes yes 0 1 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 79.109 79.172 2 2.1134E-28 91634 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 137.59 105.06 35973000 0 0 0 1958000 0 2277700 2996000 0 0 3270200 6555700 10570000 0 0 8345400 13230 4070 12071 111624;111625;111626;111627;111628;111629;111630;111631 89278;89279;89280;89281;89282;89283 89282 5577 6 EMFEDTVEER Oxidation (M) 1299.5289 0.52889667 2615 Q16576 RBBP7 Histone-binding protein RBBP7 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.68 1.57 1 24 1 2 2 2 2 2 2 2 2 2 2 2 2 37.645 37.825 2 0.00038712 42235 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 130.75 124.16 1039000000 0 0 0 63214000 56295000 71393000 57679000 58079000 52719000 77331000 130990000 120050000 116900000 79301000 155020000 13231 2615 12072 111632;111633;111634;111635;111636;111637;111638;111639;111640;111641;111642;111643;111644;111645;111646;111647;111648;111649;111650;111651;111652;111653;111654;111655;111656 89284;89285;89286;89287;89288;89289;89290;89291;89292;89293;89294;89295;89296;89297;89298;89299;89300;89301;89302;89303;89304;89305;89306;89307;89308;89309;89310;89311 89304 4269 28 EMFEDTVEER Unmodified 1283.534 0.53398204 2615 Q16576 RBBP7 Histone-binding protein RBBP7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 49.399 48.771 2 0.0005356 54756 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 127.3 120.08 869130000 0 19360000 0 28293000 31978000 45387000 40033000 42866000 28998000 78497000 98905000 90106000 51442000 72029000 241230000 13232 2615 12072 111657;111658;111659;111660;111661;111662;111663;111664;111665;111666;111667;111668;111669;111670 89312;89313;89314;89315;89316;89317;89318;89319;89320;89321;89322;89323;89324 89322 12 EMFEDTVEERVINEEYK Oxidation (M) 2174.9678 0.96777976 2615 Q16576 RBBP7 Histone-binding protein RBBP7 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS 3.12 2.62 6 1 1 2 3 2 1 76.769 72.463 2;3 2.7183E-180 92430 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 240.73 207.46 1749000000 968120000 552840000 215270000 0 0 0 0 0 0 0 0 0 0 0 12719000 13233 2615 12073 111671;111672;111673;111674;111675;111676;111677;111678 89325;89326;89327;89328;89329;89330;89331;89332;89333;89334 89331 4269 10 EMFEDTVEERVINEEYK Unmodified 2158.9729 0.97286514 2615 Q16576 RBBP7 Histone-binding protein RBBP7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 80.452 75.952 3 1.2852E-52 96300 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 144.97 139.3 1534000000 1116800000 367080000 50101000 0 0 0 0 0 0 0 0 0 0 0 0 13234 2615 12073 111679;111680;111681;111682;111683 89335;89336;89337;89338;89339 89338 5 EMFGGFFK Unmodified 961.43677 0.4367746 5254 Q9Y5X3 SNX5 Sorting nexin-5 yes yes 0 0 0 By MS/MS 2 0 1 1 88.174 80.044 2 0.038876 104122 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.141 59.236 10189000 10189000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13235 5254 12074 111684 89340 89340 1 EMFGLYGQTTGK Oxidation (M) 1346.6177 0.61765209 5274 Q9Y6B6 SAR1B GTP-binding protein SAR1b yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 52.545 52.639 2 0.00077943 58725 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 69.979 63.667 101260000 0 0 0 5881200 5033200 9013600 8931700 7725800 6024400 12377000 15833000 0 11148000 7235900 12057000 13236 5274 12075 111685;111686;111687;111688;111689;111690;111691;111692;111693;111694;111695 89341;89342;89343;89344;89345;89346;89347;89348;89349;89350;89351;89352;89353 89349 6680 13 EMFGLYGQTTGK Unmodified 1330.6227 0.62273747 5274 Q9Y6B6 SAR1B GTP-binding protein SAR1b yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.325 66.41 2 0.0045019 76219 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 57.348 53.05 101000000 0 0 0 3880500 3094100 7845400 6126500 5580700 3321800 9892400 10232000 10471000 7693900 8809000 24049000 13237 5274 12075 111696;111697;111698;111699;111700;111701;111702;111703;111704;111705;111706;111707 89354;89355;89356;89357;89358;89359;89360;89361;89362;89363;89364;89365 89354 12 EMFNLFQVTDNR Oxidation (M) 1528.698 0.69802768 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.08 82.141 2 2.7929E-06 95045 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 111.06 97.287 60058000 0 0 0 2030400 3252700 5563300 3578900 3895700 3904300 5722800 5044500 9008000 4987800 3902200 9167500 13238 4139 12076 111708;111709;111710;111711;111712;111713;111714;111715;111716;111717;111718;111719 89366;89367;89368;89369;89370;89371;89372;89373;89374;89375;89376;89377 89367 5625 12 EMFNPMYALFR 2 Oxidation (M) 1449.6421 0.64209271 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 80.916 81.052 2 0.00023175 93167 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.732 68.299 56496000 0 0 0 0 0 8698500 3006000 3775500 0 8738900 5814500 5770900 4927900 4873100 10891000 13239 3119 12077 111720;111721;111722;111723;111724;111725;111726;111727;111728 89378;89379;89380;89381;89382;89383;89384;89385 89380 4727;4728 8 EMFNPMYALFR Oxidation (M) 1433.6472 0.64717808 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 1 0 By MS/MS 10 0 1 1 92.588 92.726 2 0.0069527 107425 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.418 40.06 1461300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1461300 13240 3119 12077 111729 89386 89386 4727;4728 1 EMFNYAR Oxidation (M) 945.40145 0.40145173 1898 P62333 PSMC6 26S protease regulatory subunit 10B yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 14 1 2 2 2 2 2 2 1 28.954 29.118 2 0.030609 31861 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 65.897 38.373 117310000 0 0 0 5597100 12461000 14507000 7249700 0 0 23768000 21102000 28819000 0 0 3804900 13241 1898 12078 111730;111731;111732;111733;111734;111735;111736;111737;111738;111739;111740;111741;111742;111743 89387;89388;89389;89390;89391 89388 5 EMGDHLVK Oxidation (M) 943.44332 0.44331654 1323 P32754 HPD 4-hydroxyphenylpyruvate dioxygenase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 9.3561 8.6207 2 0.0087253 6146 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.789 33.571 1028300000 85196000 552720000 341020000 0 606790 0 820460 0 391050 0 16549000 8039200 1542500 5815800 15656000 13242 1323 12079 111744;111745;111746;111747;111748;111749;111750;111751;111752;111753;111754 89392;89393;89394;89395;89396;89397 89394 1968 5 EMGDHLVK Unmodified 927.4484 0.44840192 1323 P32754 HPD 4-hydroxyphenylpyruvate dioxygenase yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 5.2 3.97 1 1 1 2 1 2 1 1 39.748 39.221 2 0.006213 19688 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 102.77 53.183 454760000 73577000 347600000 0 0 1636700 0 0 0 0 0 0 0 0 0 31945000 13243 1323 12079 111755;111756;111757;111758;111759 89398;89399;89400 89399 3 EMGEAFAADIPR Oxidation (M) 1321.5973 0.597251 689 O95782 AP2A1 AP-2 complex subunit alpha-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 62.463 62.569 2 0.00025925 71832 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 80.763 58.023 117610000 0 0 0 6884300 5240000 0 8846900 11472000 7943600 15723000 10249000 17585000 11860000 8892000 12918000 13244 689 12080 111760;111761;111762;111763;111764;111765;111766;111767;111768;111769;111770 89401;89402;89403;89404;89405;89406;89407;89408;89409;89410;89411;89412 89409 836 12 EMGEAFAADIPR Unmodified 1305.6023 0.60233638 689 O95782 AP2A1 AP-2 complex subunit alpha-1 yes yes 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 73.096 73.18 2 0.0060887 84333 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 52.167 41.902 37033000 0 0 0 2625500 0 0 2484600 4622800 0 5258100 5178800 7914200 3751600 5197900 0 13245 689 12080 111771;111772;111773;111774;111775;111776;111777;111778 89413;89414;89415;89416 89413 4 EMGIPLGPR Oxidation (M) 984.50625 0.50625115 5301 Q9Y6Y8 SEC23IP SEC23-interacting protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 48.506 48.618 2 0.00227 55360 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 94.262 86.322 117680000 0 0 0 9507700 8276000 0 11099000 9534200 9201400 16001000 13835000 0 14969000 12220000 13040000 13246 5301 12081 111779;111780;111781;111782;111783;111784;111785;111786;111787;111788 89417;89418;89419;89420;89421;89422;89423;89424;89425;89426;89427 89427 6703 11 EMGIPLGPR Unmodified 968.51134 0.51133653 5301 Q9Y6Y8 SEC23IP SEC23-interacting protein yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 64.518 64.778 2 0.028937 74049 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 48.787 29.151 42645000 0 0 0 0 0 0 0 0 4264000 0 9587100 10159000 7277300 11357000 0 13247 5301 12081 111789;111790;111791;111792;111793 89428;89429 89428 1 EMGLPVGTAAIAPIIAAVK Oxidation (M) 1837.0383 0.038306347 4086 Q9BQ52 ELAC2 Zinc phosphodiesterase ELAC protein 2 yes yes 0 1 0 By MS/MS 2 0 1 1 98.691 93.956 2 1.8044E-05 116275 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.937 67.524 13529000 0 13529000 0 0 0 0 0 0 0 0 0 0 0 0 0 13248 4086 12082 111794 89430;89431;89432 89431 5590 3 EMGQLIVQSAEDPEK Unmodified 1672.7978 0.7978013 3488 Q8TCE6;Q6NSW5 FAM45A;FAM45B Protein FAM45A;Protein FAM45B yes no 0 0 0 By MS/MS 2.5 0.5 1 1 2 71.256 66.091 2 4.9022E-61 84196 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 184.55 168.3 45836000 0 45836000 0 0 0 0 0 0 0 0 0 0 0 0 0 13249 3488 12083 111795;111796 89433;89434 89433 2 EMGQLIVQSAEDPEK Oxidation (M) 1688.7927 0.79271593 3488 Q8TCE6;Q6NSW5 FAM45A;FAM45B Protein FAM45A;Protein FAM45B yes no 0 1 0 By MS/MS 3 0 1 1 54.767 49.888 2 5.4792E-38 61634 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 136.7 132 13078000 0 13078000 0 0 0 0 0 0 0 0 0 0 0 0 0 13250 3488 12083 111797 89435;89436 89435 5010 2 EMGQMQVLQMK 2 Oxidation (M) 1353.6091 0.60907802 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 38.124 38.288 2 0.0011448 42420 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 63.673 50.861 31328000 0 0 0 0 3303500 0 8232100 3545900 0 5794800 0 0 4471900 0 5979500 13251 3676 12084 111798;111799;111800;111801;111802;111803;111804 89437;89438;89439 89437 5210;5211;5212 3 EMGQMQVLQMK 3 Oxidation (M) 1369.604 0.60399264 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 3 0 By MS/MS 2.5 0.5 1 1 2 23.973 19.885 2 0.00034098 26172 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.355 72.684 8935800 0 8935800 0 0 0 0 0 0 0 0 0 0 0 0 0 13252 3676 12084 111805;111806 89440;89441 89440 5210;5211;5212 2 EMGQMQVLQMK Oxidation (M) 1337.6142 0.6141634 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 1 0 By MS/MS 2 0 1 1 59.885 54.026 2 0.021563 69557 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.436 49.073 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13253 3676 12084 111807 89442 89442 5210;5211;5212 1 EMGQMQVLQMK Unmodified 1321.6192 0.61924877 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 67.671 66.809 2 0.017351 85240 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.253 85.102 218800000 0 172680000 0 0 0 0 0 6744800 0 0 12942000 0 0 9773300 16657000 13254 3676 12084 111808;111809;111810;111811;111812 89443;89444 89443 1 EMGTPDVR Oxidation (M) 919.40693 0.40693104 1926 P62899 RPL31 60S ribosomal protein L31 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.543 13.704 2 0.01087 12421 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.169 33.812 565440000 0 0 0 42166000 40915000 38596000 41285000 30578000 39101000 59085000 48861000 57452000 73147000 41778000 52476000 13255 1926 12085 111813;111814;111815;111816;111817;111818;111819;111820;111821;111822;111823;111824 89445;89446;89447;89448;89449;89450;89451 89447 3103 7 EMGTPDVR Unmodified 903.41202 0.41201641 1926 P62899 RPL31 60S ribosomal protein L31 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.693 24.896 2 0.0087284 26170 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 85.212 42.212 464650000 0 0 0 47202000 27652000 27369000 27712000 29673000 25173000 37144000 30096000 55118000 47226000 36361000 73918000 13256 1926 12085 111825;111826;111827;111828;111829;111830;111831;111832;111833;111834;111835;111836 89452;89453;89454;89455;89456;89457;89458;89459;89460;89461 89460 10 EMGTPDVRIDTRLNK Unmodified 1743.8938 0.89376737 1926 P62899 RPL31 60S ribosomal protein L31 yes yes 0 0 2 By MS/MS 2 0 1 1 63.557 55.289 4 0.031679 74623 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 30.961 28.3 10146000 10146000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13257 1926 12086 111837 89462 89462 1 EMHRPELVTK Oxidation (M) 1254.6391 0.63905624 2465 Q14CX7 NAA25 N-alpha-acetyltransferase 25, NatB auxiliary subunit yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 15.805 15.961 3 0.0017707 16157 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 70.1 42.087 634650000 0 0 0 0 0 4143500 213250000 217320000 181470000 0 18469000 0 0 0 0 13258 2465 12087 111838;111839;111840;111841;111842 89463;89464;89465;89466;89467;89468 89467 4057 6 EMHRPELVTK Unmodified 1238.6441 0.64414162 2465 Q14CX7 NAA25 N-alpha-acetyltransferase 25, NatB auxiliary subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 2 2 2 1 1 1 24.997 25.193 2;3 0.0025163 27105 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 73.632 52.26 673150000 0 0 0 0 0 4658400 180000000 230970000 224090000 8597200 9330400 15509000 0 0 0 13259 2465 12087 111843;111844;111845;111846;111847;111848;111849;111850;111851;111852 89469;89470;89471;89472;89473;89474;89475 89475 5 EMIDIYSTR Unmodified 1126.5329 0.53285983 308 O43242 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 59.947 60.064 2 0.016214 68545 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 56.729 47.141 20044000 0 0 0 2034800 0 4101500 0 0 0 3791900 0 6313700 0 0 3802400 13260 308 12088 111853;111854;111855;111856;111857 89476;89477;89478;89479 89476 4 EMIDIYSTR Oxidation (M) 1142.5278 0.52777445 308 O43242 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 47.061 47.239 2 0.0090954 52789 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 59.245 48.535 27929000 0 0 0 0 3724100 5343900 0 0 0 5086600 5906500 7868300 0 0 0 13261 308 12088 111858;111859;111860;111861;111862 89480;89481;89482;89483 89480 399 4 EMIENCLDAK Oxidation (M) 1237.5319 0.53187355 1418 P40692 MLH1 DNA mismatch repair protein Mlh1 yes yes 0 1 0 By MS/MS 2 0 1 1 38.546 33.578 2 0.018179 43893 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.625 52.744 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13262 1418 12089 111863 89484 89484 2228 1 EMIENCLDAK Unmodified 1221.537 0.53695893 1418 P40692 MLH1 DNA mismatch repair protein Mlh1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 44.879 45.425 2 0.041377 51100 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 39.622 22.382 16740000 0 0 0 0 0 0 0 0 0 0 0 9495300 7244700 0 0 13263 1418 12089 111864;111865 89485 89485 1 EMILNPEGDVNSAK Oxidation (M) 1531.7188 0.7188227 4639 Q9NTZ6 RBM12 RNA-binding protein 12 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.336 49.494 2 1.4454E-26 55805 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 152.7 140.83 294620000 0 0 0 20219000 16537000 25689000 24982000 11769000 24630000 24916000 21099000 23532000 37493000 24741000 39011000 13264 4639 12090 111866;111867;111868;111869;111870;111871;111872;111873;111874;111875;111876;111877 89486;89487;89488;89489;89490;89491;89492;89493;89494;89495;89496;89497;89498;89499;89500;89501 89498 6048 16 EMILNPEGDVNSAK Unmodified 1515.7239 0.72390808 4639 Q9NTZ6 RBM12 RNA-binding protein 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.778 59.887 2 1.6853E-12 68020 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 104.79 94.563 122250000 0 0 0 6333900 5543900 6664400 7372800 8097900 4573500 7790500 10217000 12947000 8881400 14963000 28864000 13265 4639 12090 111878;111879;111880;111881;111882;111883;111884;111885;111886;111887;111888;111889 89502;89503;89504;89505;89506;89507;89508;89509;89510;89511;89512;89513 89511 12 EMIMSVLDTK Unmodified 1165.5723 0.57228181 4412 Q9H694 BICC1 Protein bicaudal C homolog 1 yes yes 0 0 0 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 33.81 34.284 3 0.038464 36766 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.108 20.34 9286800 0 0 0 0 0 0 0 0 1404400 0 0 3036800 0 2124300 2721300 13266 4412 12091 111890;111891;111892;111893 89514 89514 0 EMLAVDAPRR Unmodified 1156.6023 0.6022768 1006 P14735 IDE Insulin-degrading enzyme yes yes 0 0 1 By MS/MS By matching By matching By MS/MS 10 0 4 1 1 1 1 38.55 38.691 3 0.010037 43552 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 42.802 29.991 25719000 0 0 0 15496000 0 0 0 1887700 0 1354800 0 0 0 0 6981000 13267 1006 12092 111894;111895;111896;111897 89515 89515 1 EMLAVDAPRR Oxidation (M) 1172.5972 0.59719142 1006 P14735 IDE Insulin-degrading enzyme yes yes 0 1 1 By MS/MS 10 0 1 1 29.433 29.154 3 0.0096674 31789 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 81.338 76.357 16901000 0 0 0 16901000 0 0 0 0 0 0 0 0 0 0 0 13268 1006 12092 111898 89516 89516 1374 0 EMLELAK Unmodified 832.43644 0.43644025 161 O00487 PSMD14 26S proteasome non-ATPase regulatory subunit 14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 47.849 46.383 2 0.029674 60247 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.407 10.793 569450000 15528000 317350000 0 19083000 21914000 0 10441000 0 0 53739000 55203000 61948000 14242000 0 0 13269 161 12093 111899;111900;111901;111902;111903;111904;111905;111906;111907 89517;89518;89519;89520 89518 4 EMLELAK Oxidation (M) 848.43135 0.43135487 161 O00487 PSMD14 26S proteasome non-ATPase regulatory subunit 14 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 35.234 31.147 2 0.023751 40875 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.602 9.5731 451210000 0 442060000 9144900 0 0 0 0 0 0 0 0 0 0 0 0 13270 161 12093 111908;111909 89521 89521 1 EMLFEFIDR Oxidation (M) 1214.5642 0.56415996 450 O60942 RNGTT mRNA-capping enzyme;Polynucleotide 5'-triphosphatase;mRNA guanylyltransferase yes yes 0 1 0 By MS/MS By matching 10 0 2 1 1 83.429 83.539 2 0.037889 96784 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 40.352 29.13 4735400 0 0 0 0 0 1620800 0 0 0 0 0 0 0 0 3114600 13271 450 12094 111910;111911 89522 89522 1 EMLGGEIIPR Oxidation (M) 1129.5801 0.58014438 2608 Q16531 DDB1 DNA damage-binding protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 59.737 59.685 2 0.0037549 68800 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 67.897 49.115 34725000 0 0 0 0 10380000 7907700 10973000 0 5464700 0 0 0 0 0 0 13272 2608 12095 111912;111913;111914;111915 89523;89524;89525;89526 89526 4251 3 EMLGGEIIPR Unmodified 1113.5852 0.58522975 2608 Q16531 DDB1 DNA damage-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.88 70.951 2 0.0088751 81422 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 58.981 34.058 67625000 0 0 0 1805000 2341500 2748200 2012800 3801100 1338000 0 7126100 7583900 2973200 8159600 27736000 13273 2608 12095 111916;111917;111918;111919;111920;111921;111922;111923;111924;111925;111926;111927 89527;89528;89529;89530;89531;89532;89533;89534 89530 8 EMLGSSLIK Unmodified 976.52632 0.52631789 5061 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 0 0 0 By MS/MS 2 0 1 1 70.223 64.354 2 0.040167 82041 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.853 36.412 66873000 0 66873000 0 0 0 0 0 0 0 0 0 0 0 0 0 13274 5061 12096 111928 89535 89535 0 EMLGSSLIK Oxidation (M) 992.52123 0.52123251 5061 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 0 1 0 By MS/MS 3 0 1 1 54.537 49.657 2 0.04301 61529 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 57.96 9.4561 4411400 0 4411400 0 0 0 0 0 0 0 0 0 0 0 0 0 13275 5061 12096 111929 89536 89536 1 EMLIEVIEK Oxidation (M) 1118.5893 0.58931208 128 O00203 AP3B1 AP-3 complex subunit beta-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.67 3.74 2 2 5 2 2 1 1 1 1 1 71.348 69.127 2 0.0055642 79262 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 69.598 33.029 68090000 9623300 20473000 0 0 0 0 7952600 6226900 6464800 0 0 0 6626400 0 10723000 13276 128 12097 111930;111931;111932;111933;111934;111935;111936;111937;111938 89537;89538;89539;89540;89541;89542;89543;89544 89542 166 8 EMLIEVIEK Unmodified 1102.5944 0.59439746 128 O00203 AP3B1 AP-3 complex subunit beta-1 yes yes 0 0 0 By MS/MS 2 0 1 1 85.089 76.958 2 0.016553 100460 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.906 40.608 13403000 13403000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13277 128 12097 111939 89545 89545 1 EMLNRLESEHK Unmodified 1384.6769 0.67689831 2932 Q6P3W7 SCYL2 SCY1-like protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.294 29.487 3 0.0067081 31951 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 56.359 48.182 185250000 0 0 0 7387500 3899000 15656000 9676700 17129000 7623400 13211000 14216000 25084000 18704000 10358000 42304000 13278 2932 12098 111940;111941;111942;111943;111944;111945;111946;111947;111948;111949;111950;111951 89546;89547;89548;89549 89546 2 EMLPHVGVSDFCETK Unmodified 1747.7909 0.79094179 1291 P30876 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 76.483 72.671 3 0.015497 88059 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 35.35 30.628 54165000 0 45184000 8980700 0 0 0 0 0 0 0 0 0 0 0 0 13279 1291 12099 111952;111953 89550;89551 89551 2 EMLQAQLDR Oxidation (M) 1118.539 0.53900784 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 1 0 By MS/MS 10 0 1 1 34.942 34.942 2 0.034383 38606 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 59.35 34.427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13280 3641 12100 111954 89552 89552 1 EMLQAQLDR Unmodified 1102.5441 0.54409322 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 46.137 46.048 2 0.009002 52293 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 67.993 35.152 15635000 0 0 0 0 6151300 0 0 0 0 0 0 0 9484200 0 0 13281 3641 12100 111955;111956 89553;89554 89554 2 EMLQAQLDREAQVR Unmodified 1685.8519 0.85190256 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.35 55.477 3 3.417E-05 62262 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.386 65.795 85273000 0 0 0 4310000 4629400 7626900 5191300 6753500 4416900 0 11405000 11318000 4530900 6886000 18205000 13282 3641 12101 111957;111958;111959;111960;111961;111962;111963;111964;111965;111966;111967;111968 89555;89556;89557;89558;89559;89560;89561;89562;89563;89564;89565;89566;89567;89568;89569 89559 15 EMLQDRESQNQK Unmodified 1504.694 0.69400493 3573 Q8WWI1 LMO7 LIM domain only protein 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.023 13.179 3 0.0010799 12153 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 69.786 54.448 170300000 0 0 0 8388000 8316200 11468000 12294000 12853000 8278400 20294000 17407000 16406000 18039000 13424000 23134000 13283 3573 12102 111969;111970;111971;111972;111973;111974;111975;111976;111977;111978;111979;111980 89570;89571;89572;89573;89574;89575;89576;89577 89574 7 EMLQDRESQNQK Oxidation (M) 1520.6889 0.68891956 3573 Q8WWI1 LMO7 LIM domain only protein 7 yes yes 0 1 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 7.2468 7.3604 3 0.00022202 5755 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.522 54.891 131430000 0 0 0 6183600 6295700 7792900 8053400 8875200 0 0 33069000 19678000 8982400 13753000 18749000 13284 3573 12102 111981;111982;111983;111984;111985;111986;111987;111988;111989;111990 89578;89579;89580;89581;89582;89583;89584 89583 5062 7 EMLQQSK Oxidation (M) 878.41677 0.41676744 862;850 P07900;P08238;Q58FF7 HSP90AA1;HSP90AB1;HSP90AB3P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 47 3 5 3 3 3 4 4 4 4 4 5 5 5.1608 5.287 2 0.012375 1256 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 111.28 54.768 620130000 0 0 0 61396000 34268000 66199000 55539000 69954000 31493000 62171000 49350000 55660000 50281000 35598000 48222000 13285 850;862 12103 111991;111992;111993;111994;111995;111996;111997;111998;111999;112000;112001;112002;112003;112004;112005;112006;112007;112008;112009;112010;112011;112012;112013;112014;112015;112016;112017;112018;112019;112020;112021;112022;112023;112024;112025;112026;112027;112028;112029;112030;112031;112032;112033;112034;112035;112036;112037 89585;89586;89587;89588;89589;89590;89591;89592;89593;89594;89595;89596;89597;89598;89599;89600;89601;89602;89603;89604;89605;89606;89607;89608;89609;89610;89611;89612;89613;89614;89615;89616;89617;89618;89619;89620;89621;89622;89623;89624;89625;89626;89627;89628;89629;89630;89631;89632;89633;89634;89635;89636;89637;89638;89639;89640;89641;89642;89643;89644 89601 1068 59 EMLQQSK Unmodified 862.42185 0.42185282 862;850 P07900;P08238;Q58FF7 HSP90AA1;HSP90AB1;HSP90AB3P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 no no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 10.23 10.372 2 0.024381 9028 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 82.913 39.452 745960000 0 0 0 0 44864000 124190000 69687000 66270000 38657000 57328000 0 71920000 63784000 55848000 153410000 13286 850;862 12103 112038;112039;112040;112041;112042;112043;112044;112045;112046;112047 89645;89646;89647;89648;89649;89650;89651;89652;89653 89651 6 EMLSVEK Unmodified 834.4157 0.41570481 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 31.46 30.551 2 0.029029 32394 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 76.035 17.867 172590000 0 141360000 0 0 0 0 0 0 0 0 1763900 0 11206000 18262000 0 13287 2431 12104 112048;112049;112050;112051 89654;89655;89656 89655 3 EMLTTFGTATYK Unmodified 1361.6537 0.65370325 3247 Q8IWV8 UBR2 E3 ubiquitin-protein ligase UBR2 yes yes 0 0 0 By MS/MS 2 0 1 1 73.463 67.918 2 2.88E-05 85790 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.52 91.226 69196000 0 69196000 0 0 0 0 0 0 0 0 0 0 0 0 0 13288 3247 12105 112052 89657 89657 1 EMMNQVEGQQK Unmodified 1320.5802 0.58022073 4223 Q9BXB5 OSBPL10 Oxysterol-binding protein-related protein 10 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 24.088 24.252 2 0.0049396 24452 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.928 50.968 18725000 0 0 0 0 1303200 2776600 2102200 3573300 0 2736300 3897400 0 0 0 2335900 13289 4223 12106 112053;112054;112055;112056;112057;112058;112059 89658;89659;89660;89661 89659 4 EMMSHAEGQQR Unmodified 1302.5445 0.54450393 4222 Q9BXB4 OSBPL11 Oxysterol-binding protein-related protein 11 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 1 1 1 1 1 1 2 1 2 2 8.8505 9.0138 2;3 0.0084341 6183 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 46.73 41.514 37736000 0 0 0 1372800 1299400 1688900 2783200 2340200 1276700 2270400 7824000 5922600 2327500 2782000 5848100 13290 4222 12107 112060;112061;112062;112063;112064;112065;112066;112067;112068;112069;112070;112071;112072;112073;112074 89662;89663;89664 89664 3 EMNDAAMFYTNR 2 Oxidation (M) 1493.5915 0.5915137 2055 Q01518 CAP1 Adenylyl cyclase-associated protein 1 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 41.395 41.473 2 0.00010858 46884 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 81.865 75.332 71291000 0 0 0 5453400 5149500 9197200 7878000 5076600 0 13064000 10110000 0 0 0 15361000 13291 2055 12108 112075;112076;112077;112078;112079;112080;112081;112082 89665;89666;89667;89668;89669;89670;89671;89672 89671 3340;3341 8 EMNDAAMFYTNR Unmodified 1461.6017 0.60168445 2055 Q01518 CAP1 Adenylyl cyclase-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 61.828 62.122 2 0.00095704 70007 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 84.17 73.34 60418000 0 0 0 0 0 6515300 0 0 0 4242100 9712300 6033700 0 4647600 29267000 13292 2055 12108 112083;112084;112085;112086;112087;112088;112089 89673;89674;89675;89676;89677;89678;89679 89678 7 EMNDAAMFYTNR Oxidation (M) 1477.5966 0.59659908 2055 Q01518 CAP1 Adenylyl cyclase-associated protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 52.112 52.28 2 0.0072237 58884 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 45.879 43.147 66334000 0 0 0 0 3245200 11157000 4540600 7042900 0 7130600 15001000 12661000 5555200 0 0 13293 2055 12108 112090;112091;112092;112093;112094;112095;112096;112097;112098 89680;89681 89681 3340;3341 2 EMNDAAMFYTNRVLK Oxidation (M) 1817.844 0.84403999 2055 Q01518 CAP1 Adenylyl cyclase-associated protein 1 yes yes 0 1 1 By MS/MS 2 0 1 1 75.764 67.633 3 0.002982 89190 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.599 49.467 27988000 27988000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13294 2055 12109 112099 89682 89682 3340;3341 1 EMNDAAMFYTNRVLK Unmodified 1801.8491 0.84912537 2055 Q01518 CAP1 Adenylyl cyclase-associated protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 81.428 73.298 3 0.00098653 96048 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.805 61.047 45407000 45407000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13295 2055 12109 112100 89683 89683 1 EMNDAATFYTNR Oxidation (M) 1447.6038 0.60379294 1408 P40123 CAP2 Adenylyl cyclase-associated protein 2 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 40.774 41.073 2 7.9744E-05 45945 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 87.298 64.558 15974000 0 0 0 0 0 4454800 0 0 1701300 0 0 0 0 2478300 7339600 13296 1408 12110 112101;112102;112103;112104;112105;112106 89684;89685;89686;89687;89688 89684 2202 4 EMNDAATFYTNRVLK Oxidation (M) 1787.8512 0.85123386 1408 P40123 CAP2 Adenylyl cyclase-associated protein 2 yes yes 0 1 1 By MS/MS 2 0 1 1 70.363 62.078 3 0.00067292 82742 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.044 57.848 13786000 13786000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13297 1408 12111 112107 89689 89689 2202 1 EMNDAATFYTNRVLK Unmodified 1771.8563 0.85631924 1408 P40123 CAP2 Adenylyl cyclase-associated protein 2 yes yes 0 0 1 By MS/MS 2 0 1 1 76.279 68.149 3 0.0013846 89877 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.378 59.24 12525000 12525000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13298 1408 12111 112108 89690 89690 1 EMNPALGIDCLHK Unmodified 1496.7116 0.71156925 1548 P48643 CCT5 T-complex protein 1 subunit epsilon yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.1 3.37 6 1 22 2 3 2 1 1 2 2 2 2 2 2 2 2 2 2 65.365 64.096 2;3 1.2433E-12 72342 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 137.89 123.78 2355500000 62947000 1604800000 46167000 21080000 14621000 72014000 25507000 29680000 19004000 52596000 75902000 72656000 46052000 77738000 134760000 13299 1548 12112 112109;112110;112111;112112;112113;112114;112115;112116;112117;112118;112119;112120;112121;112122;112123;112124;112125;112126;112127;112128;112129;112130;112131;112132;112133;112134;112135;112136;112137 89691;89692;89693;89694;89695;89696;89697;89698;89699;89700;89701;89702;89703;89704;89705;89706;89707;89708;89709;89710;89711;89712;89713;89714;89715 89697 23 EMNPALGIDCLHK Oxidation (M) 1512.7065 0.70648388 1548 P48643 CCT5 T-complex protein 1 subunit epsilon yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.64 3.88 5 1 8 2 2 2 1 1 1 1 1 1 1 1 57.379 55.033 2;3 4.3939E-14 68003 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 124.51 119.24 1019400000 93246000 264540000 80565000 0 0 88472000 64734000 39236000 43515000 0 89302000 0 72332000 77134000 106330000 13300 1548 12112 112138;112139;112140;112141;112142;112143;112144;112145;112146;112147;112148;112149;112150;112151 89716;89717;89718;89719;89720;89721;89722;89723;89724;89725;89726 89720 2463 4 EMNPNYTEFK Oxidation (M) 1287.5442 0.5441528 1605;1604 P49840;P49841 GSK3A;GSK3B Glycogen synthase kinase-3 alpha;Glycogen synthase kinase-3 beta no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 39.612 39.654 2 0.0097557 44172 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 50.473 45.508 30798000 0 0 0 0 4214000 5310100 5736000 0 4399000 5842700 0 0 5296100 0 0 13301 1604;1605 12113 112152;112153;112154;112155;112156;112157 89727;89728;89729;89730;89731 89727 2586 4 EMNPNYTEFK Unmodified 1271.5492 0.54923818 1605;1604 P49840;P49841 GSK3A;GSK3B Glycogen synthase kinase-3 alpha;Glycogen synthase kinase-3 beta no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 48.853 48.957 2 0.0060629 54354 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.435 53.846 18299000 0 0 0 0 2076100 0 4137000 4336400 0 0 0 0 0 0 7749800 13302 1604;1605 12113 112158;112159;112160;112161;112162 89732;89733;89734;89735 89732 4 EMNPPDNIK Oxidation (M) 1072.4859 0.48590964 2367 Q14116 IL18 Interleukin-18 yes yes 0 1 0 By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 18.907 18.516 2 0.00092445 22647 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.22 99.609 56726000 0 33591000 1350700 1932100 962200 0 0 793860 687390 1556900 3035600 3995500 0 2035300 6784900 13303 2367 12114 112163;112164;112165;112166;112167;112168;112169;112170;112171;112172;112173 89736;89737 89736 3853 2 EMPMQTLVPAK Unmodified 1243.6305 0.63046539 844 P07602 PSAP Prosaposin;Saposin-A;Saposin-B-Val;Saposin-B;Saposin-C;Saposin-D yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 74.84 70.534 2 0.013309 87745 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.04 43.139 86773000 0 86773000 0 0 0 0 0 0 0 0 0 0 0 0 0 13304 844 12115 112174;112175 89738 89738 1 EMPPTNPIR Oxidation (M) 1069.5226 0.5226295 1312 P31947 SFN 14-3-3 protein sigma yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.633 30.822 2 0.0042333 33978 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 75.109 29.774 207720000 0 0 0 26721000 7241500 9630700 9697800 11631000 4535200 14984000 23909000 26845000 13450000 17368000 41707000 13305 1312 12116 112176;112177;112178;112179;112180;112181;112182;112183;112184;112185;112186;112187 89739;89740;89741;89742;89743;89744 89743 1945 6 EMPPTNPIR Unmodified 1053.5277 0.52771487 1312 P31947 SFN 14-3-3 protein sigma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 41.557 41.794 2 0.005606 45224 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.282 20.105 79256000 0 0 0 8053700 0 0 0 0 0 0 19690000 0 0 17426000 34085000 13306 1312 12116 112188;112189;112190;112191 89745;89746;89747 89745 3 EMQADDELLHPLGPDDK Unmodified 1921.8728 0.87275716 4197 Q9BVS4 RIOK2 Serine/threonine-protein kinase RIO2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 75.302 70.996 3 0.00040313 88788 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 47.09 31.498 25322000 0 25322000 0 0 0 0 0 0 0 0 0 0 0 0 0 13307 4197 12117 112192;112193 89748;89749 89748 2 EMQDLGGGER Oxidation (M) 1106.4662 0.46623683 2075 Q02413 DSG1 Desmoglein-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 2 1 1 1 1 1 1 1 1 1 1 10.98 11.096 2 0.0012531 9923 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 100.02 91.835 245920000 0 0 0 69725000 10554000 17866000 17714000 38731000 5903800 14842000 8170400 16231000 28601000 8761400 8820600 13308 2075 12118 112194;112195;112196;112197;112198;112199;112200;112201;112202;112203;112204;112205;112206 89750;89751;89752;89753;89754;89755;89756;89757;89758;89759;89760;89761;89762;89763 89758 3368 14 EMQDLGGGER Unmodified 1090.4713 0.47132221 2075 Q02413 DSG1 Desmoglein-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 21.597 21.808 2 0.0042378 22232 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.573 63.985 527980000 0 0 0 89544000 18925000 29035000 22767000 114510000 0 28082000 32537000 51484000 97070000 27735000 16291000 13309 2075 12118 112207;112208;112209;112210;112211;112212;112213;112214;112215;112216;112217 89764;89765;89766;89767;89768;89769;89770 89769 7 EMQDVDLAEVK Oxidation (M) 1291.5966 0.5965823 3632 Q92597 NDRG1 Protein NDRG1 yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 45.5 45.608 2 0.0014841 51366 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 68.557 46.861 8719500 0 0 0 0 0 4594900 0 0 0 4124600 0 0 0 0 0 13310 3632 12119 112218;112219 89771 89771 5131 1 EMQDVDLAEVK Unmodified 1275.6017 0.60166768 3632 Q92597 NDRG1 Protein NDRG1 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 56.496 56.834 2 0.00030407 64788 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 89.886 58.126 13355000 0 0 0 0 0 7097000 0 0 0 0 0 0 0 0 6258100 13311 3632 12119 112220;112221 89772 89772 1 EMQDVDLAEVKPLVEK Oxidation (M) 1857.9394 0.93938016 3632 Q92597 NDRG1 Protein NDRG1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 71.043 71.257 3 4.046E-11 81940 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 96.163 85.882 106280000 0 0 0 0 0 10070000 0 9033600 0 18050000 17711000 21490000 0 9667500 20261000 13312 3632 12120 112222;112223;112224;112225;112226;112227;112228 89773;89774;89775;89776;89777;89778;89779;89780 89774 5131 8 EMQDVDLAEVKPLVEK Unmodified 1841.9445 0.94446554 3632 Q92597 NDRG1 Protein NDRG1 yes yes 0 0 1 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 76.263 76.443 3 0.00058092 87380 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 57.148 51.232 28333000 0 0 0 0 0 0 0 0 0 5038000 6362200 0 0 4187800 12745000 13313 3632 12120 112229;112230;112231;112232 89781;89782 89782 1 EMQDVQGALQCYTR Unmodified 1697.7501 0.7501396 271 O15294 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 66.601 66.819 2 5.1833E-13 76007 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 127.37 112.11 31613000 0 0 0 0 0 3143200 0 4131800 0 4452200 5413900 0 0 5524100 8948300 13314 271 12121 112233;112234;112235;112236;112237;112238 89783;89784;89785;89786;89787 89784 5 EMQDVQGALQCYTR Oxidation (M) 1713.7451 0.74505423 271 O15294 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 2 56.625 56.689 2 2.6775E-08 64662 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 96.103 77.835 32069000 0 0 0 3144000 2394600 0 0 0 2656500 0 0 12369000 6716300 0 4788800 13315 271 12121 112239;112240;112241;112242;112243;112244;112245;112246 89788;89789;89790;89791;89792 89790 356 4 EMQLRQEEER Oxidation (M) 1362.6198 0.61977736 1151 P23246 SFPQ Splicing factor, proline- and glutamine-rich yes yes 0 1 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 9.7229 9.9018 3 0.0030927 6871 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 58.676 53.79 27118000 0 0 0 0 2721100 0 0 2339100 0 4418500 9270700 0 3469600 0 4899100 13316 1151 12122 112247;112248;112249;112250;112251;112252 89793;89794 89794 1650 2 EMQLRQEEER Unmodified 1346.6249 0.62486274 1151 P23246 SFPQ Splicing factor, proline- and glutamine-rich yes yes 0 0 1 By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 20.205 20.478 3 0.0065408 20743 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 45.911 38.344 108640000 0 0 0 22000000 0 0 14543000 7802700 0 13169000 15230000 22153000 0 0 13744000 13317 1151 12122 112253;112254;112255;112256;112257;112258;112259 89795;89796;89797 89797 2 EMQNLSFQDCYSSK Oxidation (M) 1751.7131 0.7130854 1267 P30084 ECHS1 Enoyl-CoA hydratase, mitochondrial yes yes 0 1 0 By MS/MS 2 0 1 1 54.298 48.492 2 2.2963E-29 62694 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.7 131.8 30414000 0 30414000 0 0 0 0 0 0 0 0 0 0 0 0 0 13318 1267 12123 112260 89798 89798 1866 1 EMQNLSFQDCYSSK Unmodified 1735.7182 0.71817077 1267 P30084 ECHS1 Enoyl-CoA hydratase, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 64.117 58.209 2 9.0879E-44 74487 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 204.17 198.07 71360000 0 71360000 0 0 0 0 0 0 0 0 0 0 0 0 0 13319 1267 12123 112261 89799 89799 1 EMQPTHPIR Unmodified 1107.5495 0.54951295 1940;1311;1214 P27348;P31946;P63104 YWHAQ;YWHAB;YWHAZ 14-3-3 protein theta;14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein zeta/delta no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.803 18.999 2 0.0037415 17806 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 122.13 75.758 177460000 0 0 0 4730500 3561100 5585300 4597600 7845900 1834100 9983400 20798000 18681000 5920200 14454000 79473000 13320 1214;1311;1940 12124 112262;112263;112264;112265;112266;112267;112268;112269;112270;112271;112272;112273 89800;89801;89802;89803;89804;89805;89806;89807;89808;89809;89810 89803 11 EMQPTHPIR Oxidation (M) 1123.5444 0.54442757 1940;1311;1214 P27348;P31946;P63104 YWHAQ;YWHAB;YWHAZ 14-3-3 protein theta;14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein zeta/delta no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 10.198 10.458 2 0.0026936 7320 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 121.05 94.446 121520000 0 0 0 0 0 0 0 5007700 2364800 8130800 19351000 17640000 0 18375000 50652000 13321 1214;1311;1940 12124 112274;112275;112276;112277;112278;112279;112280 89811;89812;89813;89814;89815;89816;89817;89818;89819 89816 1781;1942 9 EMQPTHPIRLGLALNFSVFYYEILNSPEK Oxidation (M) 3421.738 0.73804859 1940;1311 P31946;P63104 YWHAB;YWHAZ 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein zeta/delta no no 0 1 1 By MS/MS 3 0 1 1 99.802 96.255 4 8.3644E-07 100148 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 45.125 39.222 3081500 3081500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13322 1311;1940 12125 112281 89820 89820 1942 1 EMQQLSGGQK Oxidation (M) 1120.5183 0.5182724 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.8913 7.0245 2 0.00093934 5261 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 91.853 54.295 25646000 0 0 0 1194600 1865100 0 2372200 1873800 1920300 0 3487800 2533800 3263400 2668400 4466900 13323 5071 12126 112282;112283;112284;112285;112286;112287;112288;112289;112290;112291;112292;112293 89821;89822;89823;89824;89825;89826;89827;89828;89829 89825 6444 9 EMRATAEDFNK Unmodified 1310.5925 0.59249998 3895 Q96JJ3 ELMO2 Engulfment and cell motility protein 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 30.105 26.302 3 0.010339 34708 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.132 44.103 27276000 0 18697000 8579100 0 0 0 0 0 0 0 0 0 0 0 0 13324 3895 12127 112294;112295 89830 89830 1 EMRILMVGLDAAGK 2 Oxidation (M) 1534.7847 0.7847342 2011 P84077;P61204 ARF1;ARF3 ADP-ribosylation factor 1;ADP-ribosylation factor 3 yes no 0 2 1 By MS/MS By MS/MS 2 0 3 2 1 72.746 64.528 2;3 0.00861 85830 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.718 25.487 79288000 79288000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13325 2011 12128 112296;112297;112298 89831;89832;89833 89833 3261;3262 2 EMRILMVGLDAAGK Oxidation (M) 1518.7898 0.78981958 2011 P84077;P61204 ARF1;ARF3 ADP-ribosylation factor 1;ADP-ribosylation factor 3 yes no 0 1 1 By MS/MS 2 0 2 2 81.65 73.519 3 2.8524E-06 94305 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 103.13 88.877 53224000 53224000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13326 2011 12128 112299;112300 89834;89835 89834 3261;3262 2 EMRILMVGLDAAGK Unmodified 1502.7949 0.79490495 2011 P84077;P61204 ARF1;ARF3 ADP-ribosylation factor 1;ADP-ribosylation factor 3 yes no 0 0 1 By MS/MS 2 0 1 1 89.017 80.886 3 0.00082065 105126 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.261 50.017 8218700 8218700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13327 2011 12128 112301 89836 89836 1 EMRVTLAK Unmodified 946.52699 0.52698659 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 1 By MS/MS 2 0 1 1 38.455 31.893 2 0.025882 44375 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 121.09 48.954 39032000 39032000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13328 2392 12129 112302 89837 89837 0 EMSCIAEDVIIVTSSLTK Oxidation (M) 2010.9853 0.98534408 5267 Q9Y678 COPG1 Coatomer subunit gamma-1 yes yes 0 1 0 By MS/MS 2 0 1 1 100.25 95.541 3 6.5468E-05 118108 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.494 61.455 14125000 0 14125000 0 0 0 0 0 0 0 0 0 0 0 0 0 13329 5267 12130 112303 89838 89838 6669 1 EMSCIAEDVIIVTSSLTK Unmodified 1994.9904 0.99042946 5267 Q9Y678 COPG1 Coatomer subunit gamma-1 yes yes 0 0 0 By MS/MS By MS/MS 2 0.816 1 1 1 1 2 101.76 97.666 3 4.2459E-17 95627 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 101.04 94.915 11138000 0 11138000 0 0 0 0 0 0 0 0 0 0 0 0 0 13330 5267 12130 112304;112305;112306 89839;89840;89841 89841 3 EMSGDLEEGMLAVVK 2 Oxidation (M) 1638.7481 0.74807392 1643 P50995 ANXA11 Annexin A11 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 60.663 60.718 2 0.00040242 68681 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.132 48.179 32404000 0 0 0 3110900 2839000 4318100 3890900 2332600 2032800 3610000 0 5569300 0 0 4700500 13331 1643 12131 112307;112308;112309;112310;112311;112312;112313;112314;112315 89842;89843;89844;89845;89846;89847 89845 2653;2654 6 EMSGDLEEGMLAVVK Oxidation (M) 1622.7532 0.7531593 1643 P50995 ANXA11 Annexin A11 yes yes 0 1 0 By MS/MS 10 0 1 1 80.765 80.875 2 5.2967E-05 92712 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 76.332 58.273 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13332 1643 12131 112316 89848 89848 2653;2654 1 EMSGSTSELLIK Unmodified 1293.6486 0.64861787 4622 Q9NS91 RAD18 E3 ubiquitin-protein ligase RAD18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 59.716 59.991 2 0.0031285 68076 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.943 45.714 36024000 0 0 0 0 0 2974500 0 2902200 0 5799500 5577700 4096700 3122900 3580400 7970200 13333 4622 12132 112317;112318;112319;112320;112321;112322;112323;112324 89849;89850;89851;89852;89853;89854;89855 89855 7 EMSNINHPDIRLK Oxidation (M) 1581.7933 0.79332505 3087 Q7Z3U7 MON2 Protein MON2 homolog yes yes 0 1 1 By MS/MS 2 0 1 1 48.736 40.911 3 0.049286 56823 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 44.511 37.141 11854000 11854000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13334 3087 12133 112325 89856 89856 0 EMSQLMLK Unmodified 978.48782 0.48782389 4402 Q9H4L7 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 yes yes 0 0 0 By MS/MS 2 0 1 1 59.677 53.834 2 0.02179 69271 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.244 56.927 43409000 0 43409000 0 0 0 0 0 0 0 0 0 0 0 0 0 13335 4402 12134 112326 89857 89857 1 EMSSSTLNLVVAGAPK Oxidation (M) 1618.8236 0.82362212 3490 Q8TCS8 PNPT1 Polyribonucleotide nucleotidyltransferase 1, mitochondrial yes yes 0 1 0 By MS/MS 2 0 1 1 76.193 71.355 2 0.00036572 89163 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.911 73.819 15355000 0 15355000 0 0 0 0 0 0 0 0 0 0 0 0 0 13336 3490 12135 112327 89858 89858 5011 1 EMSSSTLNLVVAGAPK Unmodified 1602.8287 0.8287075 3490 Q8TCS8 PNPT1 Polyribonucleotide nucleotidyltransferase 1, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 81.304 76.599 2 0.018613 95403 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 54.7 36.388 25461000 0 25461000 0 0 0 0 0 0 0 0 0 0 0 0 0 13337 3490 12135 112328 89859 89859 1 EMSVQEAYK Oxidation (M) 1099.4856 0.48557529 1029 P15924 DSP Desmoplakin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 20 2 2 2 1 2 2 2 2 2 2 1 19.126 19.288 2 0.0051302 19593 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 71.501 58.234 81551000 0 0 0 23704000 4593400 6873800 2576800 10806000 4539900 5475400 5362800 7257900 8639200 1720700 0 13338 1029 12136 112329;112330;112331;112332;112333;112334;112335;112336;112337;112338;112339;112340;112341;112342;112343;112344;112345;112346;112347;112348 89860;89861;89862;89863;89864;89865;89866;89867;89868;89869;89870;89871 89869 1429 11 EMSVQEAYK Unmodified 1083.4907 0.49066067 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 33.468 33.628 2 0.0031541 36927 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 92.439 85.289 113410000 0 0 0 30617000 10184000 13682000 7569700 0 0 0 19177000 17569000 0 0 14611000 13339 1029 12136 112349;112350;112351;112352;112353;112354;112355;112356;112357;112358 89872;89873;89874;89875;89876;89877;89878;89879;89880 89872 9 EMSVQEAYKK Oxidation (M) 1227.5805 0.58053831 1029 P15924 DSP Desmoplakin yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 15 2 1 2 2 2 1 2 2 1 13.154 13.304 2;3 0.0020667 12215 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 59.931 47.872 98078000 0 0 0 21949000 0 3674700 6948200 26913000 4177700 0 6070500 11734000 12339000 4272500 0 13340 1029 12137 112359;112360;112361;112362;112363;112364;112365;112366;112367;112368;112369;112370;112371;112372;112373 89881;89882;89883;89884;89885;89886;89887 89883 1429 5 EMSVQEAYKK Unmodified 1211.5856 0.58562368 1029 P15924 DSP Desmoplakin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 2 1 1 2 2 25.748 25.281 2;3 0.0024417 27043 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 48.602 38.498 165650000 0 15990000 0 40960000 11247000 0 808180 49434000 0 7453100 0 16742000 13429000 0 9587900 13341 1029 12137 112374;112375;112376;112377;112378;112379;112380;112381;112382;112383;112384;112385;112386 89888;89889;89890;89891;89892;89893;89894 89893 5 EMSVYEAYRK Unmodified 1274.5965 0.59652272 2501 Q15149 PLEC Plectin yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 38.878 38.955 3 0.042578 43298 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 24.343 10.38 21765000 0 0 0 6402800 0 0 0 4370500 0 0 0 0 5574000 5417600 0 13342 2501 12138 112387;112388;112389;112390 89895;89896 89896 2 EMTAACTPR Oxidation (M) 1051.4427 0.44266462 1418 P40692 MLH1 DNA mismatch repair protein Mlh1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 8.6567 8.7796 2 0.0085076 6375 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.59 40.886 24184000 0 0 0 1848400 1724700 1559000 1360100 1325300 1131600 1866900 5569800 3488400 2228400 0 2081400 13343 1418 12139 112391;112392;112393;112394;112395;112396;112397;112398;112399;112400;112401 89897;89898;89899;89900;89901 89897 2229 5 EMTAEFYALK Unmodified 1201.5689 0.56891099 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 72.927 72.378 2 0.003971 90425 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.853 79.628 40699000 0 18324000 0 0 0 3200100 0 0 2555800 0 3603900 6101000 3464000 3449900 0 13344 5189 12140 112402;112403;112404;112405;112406;112407;112408 89902;89903;89904;89905;89906;89907;89908 89903 7 EMTAEFYALK Oxidation (M) 1217.5638 0.56382561 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 59.347 59.867 2 0.0059294 68048 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 58.676 49.931 3931000 0 0 0 0 0 0 0 0 0 0 0 3931000 0 0 0 13345 5189 12140 112409;112410;112411;112412;112413;112414 89909;89910;89911;89912;89913;89914 89913 6580 6 EMTCRDIVK Unmodified 1150.5475 0.54746404 1195 P25788 PSMA3 Proteasome subunit alpha type-3 yes yes 0 0 1 By matching By matching By MS/MS 2 0 3 1 1 1 28.932 24.574 2 0.044523 31092 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 94.302 52.193 29479000 7323200 5153200 17002000 0 0 0 0 0 0 0 0 0 0 0 0 13346 1195 12141 112415;112416;112417 89915 89915 1 EMTHLQK Oxidation (M) 901.43275 0.43275186 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 1 0 By matching By MS/MS 2 0 2 1 1 5.8087 2.4998 2 0.024091 4535 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.068 52.457 206760000 26694000 180060000 0 0 0 0 0 0 0 0 0 0 0 0 0 13347 2431 12142 112418;112419 89916 89916 1 EMTLDEWK Unmodified 1050.4692 0.46919694 3405 Q8NC51 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62.884 61.767 2 0.0088146 70359 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 84.916 52.961 871180000 17981000 425150000 6122300 22319000 18843000 25590000 21204000 21648000 23709000 30129000 51234000 58587000 35241000 35783000 77639000 13348 3405 12143 112420;112421;112422;112423;112424;112425;112426;112427;112428;112429;112430;112431;112432;112433;112434 89917;89918;89919;89920;89921;89922;89923;89924;89925;89926;89927;89928 89922 11 EMTLLSSQSSSLVAPSGSVSAENPEQR Oxidation (M) 2806.3291 0.32908123 2993 Q6XZF7 DNMBP Dynamin-binding protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 74.209 74.346 3 2.607E-42 85833 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 92.275 85.505 49930000 0 0 0 0 0 7238400 8456600 0 0 8549500 6574200 11686000 7425600 0 0 13349 2993 12144 112435;112436;112437;112438;112439;112440 89929;89930;89931;89932;89933;89934;89935 89935 4607 7 EMTRTGLATK Unmodified 1106.5754 0.57539335 4867 Q9UDY2 TJP2 Tight junction protein ZO-2 yes yes 0 0 1 By MS/MS 2 0 1 1 20.571 15.847 2 0.00038016 22968 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 123.5 69.536 19013000 19013000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13350 4867 12145 112441 89936;89937 89936 2 EMVANWDSLR Oxidation (M) 1235.5605 0.56047157 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 2 1 1 1 1 1 58.064 58.254 2 0.0031657 66195 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 71.501 47.471 44254000 0 0 0 0 0 4772700 8019800 0 4628500 5567600 0 8545200 7000500 5719400 0 13351 4819 12146 112442;112443;112444;112445;112446;112447;112448;112449 89938;89939;89940;89941;89942;89943;89944 89938 6184 6 EMVANWDSLR Unmodified 1219.5656 0.56555694 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 69.492 69.548 2 0.0027524 79380 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.455 72.523 55138000 0 0 0 1495400 1398400 5228700 2340900 3561200 2209400 3840200 0 6235600 4229500 5540900 19058000 13352 4819 12146 112450;112451;112452;112453;112454;112455;112456;112457;112458;112459;112460 89945;89946;89947;89948;89949;89950;89951 89948 7 EMVELPLRHPALFK Oxidation (M) 1694.9178 0.91779728 1755 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 1 1 By MS/MS 10 0 1 1 73.631 73.971 4 0.016669 84629 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.789 39.879 47855000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47855000 13353 1755 12147 112461 89952 89952 2867 0 EMVELSK Unmodified 834.4157 0.41570481 3168 Q86VN1 VPS36 Vacuolar protein-sorting-associated protein 36 yes yes 0 0 0 By MS/MS 2 0 1 1 35.545 30.698 2 0.031978 40185 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.284 20.249 36330000 0 36330000 0 0 0 0 0 0 0 0 0 0 0 0 0 13354 3168 12148 112462 89953 89953 1 EMVLAQEESAR Unmodified 1261.5973 0.597251 3217 Q8IUD2 ERC1 ELKS/Rab6-interacting/CAST family member 1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 40.445 40.608 2 0.0044492 45106 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 76.465 44.244 24221000 0 0 0 0 1617900 3021400 3311500 2515000 0 0 5075700 0 0 0 8679900 13355 3217 12149 112463;112464;112465;112466;112467;112468;112469;112470 89954;89955;89956;89957;89958 89954 4 EMVLAQEESAR Oxidation (M) 1277.5922 0.59216562 3217 Q8IUD2 ERC1 ELKS/Rab6-interacting/CAST family member 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 28.168 28.434 2 0.010857 29637 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 44.318 20.287 23007000 0 0 0 0 2588200 0 0 0 0 3126600 4423200 3927300 4996500 3944700 0 13356 3217 12149 112471;112472;112473;112474;112475;112476;112477 89959;89960 89960 4834 2 EMVLEIIREK Oxidation (M) 1274.6904 0.69042311 3873 Q96I24 FUBP3 Far upstream element-binding protein 3 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 61.089 61.077 3 0.010776 69514 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 56.548 39.074 12822000 0 0 0 0 2049900 0 4263000 0 2673600 0 0 0 3835300 0 0 13357 3873 12150 112478;112479;112480;112481;112482;112483 89961;89962;89963;89964 89961 5382 3 EMVLELIR Unmodified 1001.558 0.55795237 3737 Q96AE4 FUBP1 Far upstream element-binding protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 81.873 82.068 2 0.028761 95069 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 56.547 0 6823300 0 0 0 0 0 0 0 0 0 0 6823300 0 0 0 0 13358 3737 12151 112484 89965 89965 1 EMVMQYINTASK Unmodified 1413.6632 0.66322208 4630 Q9NSV4 DIAPH3 Protein diaphanous homolog 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 68.601 68.305 2 2.385E-05 77563 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.855 82.44 87878000 0 30200000 0 0 2000300 4025000 3032400 3897600 2227200 10950000 5343500 7170400 2786400 5288900 10956000 13359 4630 12152 112485;112486;112487;112488;112489;112490;112491;112492;112493;112494;112495;112496 89966;89967;89968;89969;89970;89971;89972;89973;89974;89975;89976;89977 89970 12 EMVMQYINTASK Oxidation (M) 1429.6581 0.6581367 4630 Q9NSV4 DIAPH3 Protein diaphanous homolog 3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 58.776 57.851 2 1.7903E-05 65871 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 99.568 79.264 80528000 0 13126000 0 6468900 10415000 0 13291000 9765800 0 16728000 0 0 0 10733000 0 13360 4630 12152 112497;112498;112499;112500;112501;112502;112503;112504 89978;89979;89980;89981;89982;89983;89984;89985 89979 6022;6023 8 EMVMQYINTASK 2 Oxidation (M) 1445.6531 0.65305132 4630 Q9NSV4 DIAPH3 Protein diaphanous homolog 3 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 2 1 1 1 1 41.37 41.248 2 0.00014101 46123 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 79.974 70.02 14515000 0 0 0 2366300 2797600 0 5469000 0 0 0 3881800 0 0 0 0 13361 4630 12152 112505;112506;112507;112508;112509;112510 89986;89987;89988;89989;89990 89990 6022;6023 5 EMVQEDQK Unmodified 1005.4437 0.44371047 4950 Q9UJY5 GGA1 ADP-ribosylation factor-binding protein GGA1 yes yes 0 0 0 By MS/MS 10 0 1 1 8.6648 9.0072 2 0.028761 6484 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.547 37.816 12157000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12157000 13362 4950 12153 112511 89991 89991 1 EMVQNLMVLR 2 Oxidation (M) 1263.6315 0.63152802 947 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 3 1 1 2 1 55.695 55.922 2 0.00060411 64022 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 96.492 56.389 73535000 0 0 0 0 0 12733000 9086500 0 7109800 11736000 8040000 0 0 14248000 10582000 13363 947 12154 112512;112513;112514;112515;112516;112517;112518;112519;112520;112521;112522 89992;89993;89994;89995;89996;89997;89998 89996 1225;1226 6 EMVQNLMVLR Oxidation (M) 1247.6366 0.6366134 947 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 4 1 2 1 70.185 70.498 2 0.0024957 77469 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.213 30.492 19636000 0 0 0 0 0 0 0 0 0 0 2995400 0 0 7857800 8782700 13364 947 12154 112523;112524;112525;112526 89999;90000;90001;90002 89999 1225;1226 4 EMVSDVDLSFNK Oxidation (M) 1398.6337 0.63369609 4468 Q9H9A6 LRRC40 Leucine-rich repeat-containing protein 40 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63.908 62.956 2 1.2178E-06 72292 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 114.4 86.193 229080000 8571900 75293000 0 0 15909000 12391000 12586000 9656200 11390000 15679000 11862000 18588000 11267000 10111000 15774000 13365 4468 12155 112527;112528;112529;112530;112531;112532;112533;112534;112535;112536;112537;112538;112539;112540 90003;90004;90005;90006;90007;90008;90009;90010;90011;90012;90013;90014;90015;90016;90017 90011 5905 14 EMVSDVDLSFNK Unmodified 1382.6388 0.63878147 4468 Q9H9A6 LRRC40 Leucine-rich repeat-containing protein 40 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.8 3.92 2 3 1 1 1 1 1 74.265 71.821 2 0.0014113 89551 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.26 83.743 177090000 8475100 147420000 0 0 0 0 0 0 0 7393900 6976300 0 0 0 6826000 13366 4468 12155 112541;112542;112543;112544;112545 90018;90019;90020 90018 3 EMVSLLPTK Oxidation (M) 1032.5525 0.55253264 3813 Q96EK5 KIAA1279 KIF1-binding protein yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 55.021 55.272 2 0.0055125 63142 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 69.825 55.043 49759000 0 0 0 0 0 9066900 5771100 0 1489300 6946000 9540000 10754000 6192000 0 0 13367 3813 12156 112546;112547;112548;112549;112550;112551;112552 90021;90022;90023;90024 90023 5338 4 EMVSLLPTK Unmodified 1016.5576 0.55761802 3813 Q96EK5 KIAA1279 KIF1-binding protein yes yes 0 0 0 By MS/MS By MS/MS 5 3.56 1 1 1 2 1 72.306 69.508 2 0.0066168 87877 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.06 89.275 362740000 0 347290000 0 0 0 0 0 0 0 0 0 0 0 0 15447000 13368 3813 12156 112553;112554;112555 90025;90026;90027 90025 3 EMWTEVPK Oxidation (M) 1034.4743 0.47428232 1894 P62316 SNRPD2 Small nuclear ribonucleoprotein Sm D2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 42.976 43.216 2 0.0080192 48589 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 75.243 75.243 392990000 0 0 0 0 29094000 24533000 34034000 28587000 27760000 39328000 50540000 50687000 35527000 28169000 44731000 13369 1894 12157 112556;112557;112558;112559;112560;112561;112562;112563;112564;112565;112566 90028;90029;90030;90031;90032;90033;90034;90035;90036;90037;90038;90039;90040 90038 3065 13 EMWTEVPK Unmodified 1018.4794 0.4793677 1894 P62316 SNRPD2 Small nuclear ribonucleoprotein Sm D2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.076 55.209 2 0.011784 62268 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 76.134 46.796 584400000 0 0 0 21612000 26966000 26916000 36554000 39732000 32485000 46038000 68681000 66977000 48832000 57237000 112370000 13370 1894 12157 112567;112568;112569;112570;112571;112572;112573;112574;112575;112576;112577;112578 90041;90042;90043;90044;90045;90046;90047;90048;90049;90050;90051;90052 90045 11 EMYDADLLEEEVIISWSEK Oxidation (M) 2314.0563 0.056260415 1751 P55010 EIF5 Eukaryotic translation initiation factor 5 yes yes 0 1 0 By MS/MS By MS/MS 2.4 0.49 3 2 3 2 98.647 93.081 2;3 9.8245E-97 117146 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 193.16 182.21 59031000 48277000 10755000 0 0 0 0 0 0 0 0 0 0 0 0 0 13371 1751 12158 112579;112580;112581;112582;112583 90053;90054;90055;90056;90057 90057 2849 5 EMYDADLLEEEVIISWSEK Unmodified 2298.0613 0.061345792 1751 P55010 EIF5 Eukaryotic translation initiation factor 5 yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 99.587 92.991 2;3 1.0062E-23 99241 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 119.01 106.45 24297000 24297000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13372 1751 12158 112584;112585;112586 90058;90059;90060 90058 2 ENADGQTETCTTYSK Unmodified 1703.6945 0.69445844 4132 Q9BSU1 C16orf70 UPF0183 protein C16orf70 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 15.896 16.099 2 7.3659E-07 15720 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 85.845 79.742 30384000 0 0 0 0 1313900 0 2724400 0 0 0 0 6971100 7104100 0 12270000 13373 4132 12159 112587;112588;112589;112590;112591 90061;90062;90063 90063 3 ENADLAGELR Unmodified 1086.5306 0.53055165 1366 P35749 MYH11 Myosin-11 yes yes 0 0 0 By MS/MS 10 0 1 1 21.501 21.237 2 0.012302 22018 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 52.716 7.6347 10889000 0 0 0 0 10889000 0 0 0 0 0 0 0 0 0 0 13374 1366 12160 112592 90064 90064 1 ENADPRPPVQFPNLPR Unmodified 1845.9486 0.94858014 2796 Q5TDH0 DDI2 Protein DDI1 homolog 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 75.78 75.959 3 0.00061053 87191 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.599 48.422 72235000 0 0 0 0 0 0 0 0 0 11157000 11183000 12930000 6793000 6288100 23884000 13375 2796 12161 112593;112594;112595;112596;112597;112598 90065;90066;90067;90068;90069;90070 90066 6 ENAELESR Unmodified 946.43559 0.43558863 52 CON__O76013;O76013 KRT36 Keratin, type I cuticular Ha6 yes no 0 0 0 By MS/MS By matching 10 0 2 1 1 11.043 11.219 2 0.037548 9888 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 51.346 27.822 + 16582000 0 0 0 0 0 0 0 15985000 0 0 0 0 596980 0 0 13376 52 12162 112599;112600 90071 90071 1 ENAEQGEVDMESHR Unmodified 1629.6689 0.6689124 995 P14209 CD99 CD99 antigen yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 22.916 23.122 2;3 5.1554E-13 24108 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 131.43 120.91 475190000 0 0 0 27808000 30670000 19107000 30134000 34768000 20797000 46314000 39532000 57107000 56245000 39199000 73509000 13377 995 12163 112601;112602;112603;112604;112605;112606;112607;112608;112609;112610;112611;112612;112613;112614;112615;112616;112617;112618;112619;112620;112621;112622;112623;112624 90072;90073;90074;90075;90076;90077;90078;90079;90080;90081;90082;90083;90084;90085;90086 90074 14 ENAEQGEVDMESHR Oxidation (M) 1645.6638 0.66382702 995 P14209 CD99 CD99 antigen yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 30 2 3 2 2 3 2 3 3 2 2 3 3 13.32 13.489 2;3 0.00037885 12408 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 59.248 56.297 217710000 0 0 0 10030000 20609000 9705900 15050000 14460000 13282000 26368000 27250000 15226000 16078000 19179000 30469000 13378 995 12163 112625;112626;112627;112628;112629;112630;112631;112632;112633;112634;112635;112636;112637;112638;112639;112640;112641;112642;112643;112644;112645;112646;112647;112648;112649;112650;112651;112652;112653;112654 90087;90088;90089;90090;90091;90092;90093;90094;90095;90096;90097;90098;90099;90100;90101;90102;90103 90100 1345 9 ENAEVDGDDDAEEMEAK Unmodified 1865.7109 0.71089637 804 P05198 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 35.108 35.264 2 3.9521E-39 37841 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 144.27 143.98 69152000 0 0 0 4661300 3430200 8003000 4168900 4223800 0 6453200 5884800 14141000 0 0 18186000 13379 804 12164 112655;112656;112657;112658;112659;112660;112661;112662;112663 90104;90105;90106;90107;90108;90109;90110;90111;90112 90107 9 ENAGEDPGLAR Unmodified 1127.5207 0.52071524 1995 P81605 DCD Dermcidin;Survival-promoting peptide;DCD-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20.91 20.452 2 4.8349E-37 21278 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 182.4 147.04 14073000000 4968100 28769000 0 1307700000 1317200000 1232400000 874460000 999800000 494770000 957420000 2408200000 2047400000 927760000 570820000 901110000 13380 1995 12165 112664;112665;112666;112667;112668;112669;112670;112671;112672;112673;112674;112675;112676;112677 90113;90114;90115;90116;90117;90118;90119;90120;90121;90122;90123;90124;90125;90126;90127;90128 90124 16 ENAGEDPGLARQAPK Unmodified 1551.7641 0.76413341 1995 P81605 DCD Dermcidin;Survival-promoting peptide;DCD-1 yes yes 0 0 1 By matching By MS/MS By MS/MS 2.17 0.373 5 1 2 3 1 28.936 24.376 2;3 2.6828E-22 32183 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.75 127.93 133630000 12632000 115630000 5373200 0 0 0 0 0 0 0 0 0 0 0 0 13381 1995 12166 112678;112679;112680;112681;112682;112683 90129;90130;90131 90129 2 ENAGEDPGLARQAPKPR Unmodified 1804.918 0.91800829 1995 P81605 DCD Dermcidin;Survival-promoting peptide;DCD-1 yes yes 0 0 2 By MS/MS 10 0 1 1 27.254 27.272 4 0.000908 29246 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 52.522 48.421 59334000 0 0 0 0 0 0 59334000 0 0 0 0 0 0 0 0 13382 1995 12167 112684 90132;90133 90133 2 ENAIRIVDLGEEPEK Unmodified 1710.8788 0.87882882 646 O95361;Q309B1 TRIM16;TRIM16L Tripartite motif-containing protein 16;Tripartite motif-containing protein 16-like protein yes no 0 0 1 By MS/MS 2 0 1 1 72.2 69.115 3 0.0064824 84611 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 41.967 31.332 7799400 0 0 7799400 0 0 0 0 0 0 0 0 0 0 0 0 13383 646 12168 112685 90134;90135 90134 2 ENAIRIVDLGEEPEKPAPSLVGTAP Unmodified 2601.365 0.36499645 646 O95361;Q309B1 TRIM16;TRIM16L Tripartite motif-containing protein 16;Tripartite motif-containing protein 16-like protein yes no 0 0 2 By MS/MS 2 0 1 1 85.46 83.027 3 0.00011064 100527 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 57.945 55.404 14155000 0 0 14155000 0 0 0 0 0 0 0 0 0 0 0 0 13384 646 12169 112686 90136 90136 1 ENALDRAEQAEADK Unmodified 1558.7223 0.72232817 884 P09493 TPM1 Tropomyosin alpha-1 chain yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 6.33 3.93 6 1 8 2 3 2 1 1 1 1 1 1 1 1 37.725 35.441 2;3 8.2786E-44 44478 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 173.19 0 1002400000 102310000 633710000 84781000 9329700 7359000 0 23896000 11285000 0 15064000 0 41950000 36713000 35995000 0 13385 884 12170 112687;112688;112689;112690;112691;112692;112693;112694;112695;112696;112697;112698;112699;112700;112701 90137;90138;90139;90140;90141;90142;90143 90141 5 ENALDRAEQAEADKK Unmodified 1686.8173 0.81729119 884 P09493 TPM1 Tropomyosin alpha-1 chain yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.16 3.84 1 9 1 20 4 4 3 2 1 1 2 1 1 2 2 2 2 2 2 34.451 33.21 2;3;4 7.5944E-31 95396 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 132.84 0 2955100000 364030000 289060000 1658500000 38142000 8703900 12282000 38019000 17001000 5997200 62239000 181900000 35365000 53946000 119180000 70767000 13386 884 12171 112702;112703;112704;112705;112706;112707;112708;112709;112710;112711;112712;112713;112714;112715;112716;112717;112718;112719;112720;112721;112722;112723;112724;112725;112726;112727;112728;112729;112730;112731;112732 90144;90145;90146;90147;90148;90149;90150;90151;90152;90153;90154;90155;90156;90157;90158;90159;90160 90149 12 ENALLELSK Unmodified 1015.555 0.55497548 3635 Q92600 RQCD1 Cell differentiation protein RCD1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.981 62.081 2 0.005081 71069 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 84.213 40.966 194540000 0 0 0 13298000 12523000 17310000 10119000 12898000 8591000 16806000 17776000 24907000 18474000 15956000 25878000 13387 3635 12172 112733;112734;112735;112736;112737;112738;112739;112740;112741;112742;112743;112744 90161;90162;90163;90164;90165 90162 3 ENALSELDVPFK Unmodified 1360.6874 0.68744622 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 84.064 83.751 2 1.7103E-05 97226 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 105.86 86.077 583770000 0 107820000 0 10741000 23631000 30138000 29427000 48683000 38469000 54166000 57052000 63173000 37931000 35456000 47088000 13388 3023 12173 112745;112746;112747;112748;112749;112750;112751;112752;112753;112754;112755;112756;112757 90166;90167;90168;90169;90170;90171;90172;90173;90174;90175;90176;90177;90178;90179 90176 13 ENALSQLDVPFK Unmodified 1359.7034 0.70343063 3970 Q96RL7 VPS13A Vacuolar protein sorting-associated protein 13A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 81.906 82.02 2 2.4838E-05 94895 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 109.42 81.406 32170000 0 0 0 0 0 0 4839900 0 0 11792000 0 0 6505900 9031400 0 13389 3970 12174 112758;112759;112760;112761;112762;112763;112764;112765;112766;112767 90180;90181;90182;90183;90184;90185;90186;90187;90188;90189 90181 10 ENALSSGTLQEEQR Unmodified 1560.738 0.73797824 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.474 38.654 2 2.4888E-26 43049 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 151.98 132.73 99297000 0 0 0 5937000 4651200 8096600 7674900 5603900 6506600 9984500 9158100 13258000 9901100 7057000 11469000 13390 2193 12175 112768;112769;112770;112771;112772;112773;112774;112775;112776;112777;112778;112779 90190;90191;90192;90193;90194;90195;90196;90197;90198;90199;90200;90201;90202 90190 13 ENALSSGTLQEEQRTPPPGQDTQQFHEK Unmodified 3151.4806 0.48064793 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 0 1 By MS/MS 2 0 1 1 54.147 50.249 4 1.9036E-05 62857 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 40.104 37.233 11954000 0 0 11954000 0 0 0 0 0 0 0 0 0 0 0 0 13391 2193 12176 112780 90203 90203 1 ENALVQMADANQAQLAMNHLSGQR 2 Oxidation (M) 2641.2337 0.23368148 687 O95758 PTBP3 Polypyrimidine tract-binding protein 3 yes yes 0 2 0 By matching By MS/MS By matching By matching By MS/MS 10 0 5 1 1 1 1 1 62.296 62.29 3 9.0629E-06 70639 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 40.098 37.734 16347000 0 0 0 0 1436400 3364400 4198600 3043700 0 0 0 0 0 4304000 0 13392 687 12177 112781;112782;112783;112784;112785 90204 90204 833;834 1 ENALVQMADGNQAQLAMSHLNGHK 2 Oxidation (M) 2608.2122 0.21221776 1208 P26599 PTBP1 Polypyrimidine tract-binding protein 1 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 7.54 3.69 4 9 2 2 1 1 1 2 1 2 1 55.286 53.559 4 3.7278E-12 60486 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 69.525 62.414 327250000 47491000 0 32741000 11227000 0 0 0 12920000 23911000 85524000 0 21459000 0 50085000 41898000 13393 1208 12178 112786;112787;112788;112789;112790;112791;112792;112793;112794;112795;112796;112797;112798 90205;90206;90207;90208;90209;90210;90211;90212;90213;90214;90215 90213 1763;1764 10 ENALVQMADGNQAQLAMSHLNGHK Oxidation (M) 2592.2173 0.21730313 1208 P26599 PTBP1 Polypyrimidine tract-binding protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 6.36 3.98 5 6 3 1 1 1 1 2 2 70.085 67.23 3;4 3.7452E-42 89743 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 115.36 107.91 246820000 131500000 33425000 2542500 0 0 4784600 0 0 5776900 13801000 0 0 0 0 54985000 13394 1208 12178 112799;112800;112801;112802;112803;112804;112805;112806;112807;112808;112809 90216;90217;90218;90219;90220;90221;90222 90222 1763;1764 6 ENALVQMADGNQAQLAMSHLNGHK Unmodified 2576.2224 0.22238851 1208 P26599 PTBP1 Polypyrimidine tract-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4 3.46 3 1 2 1 1 81.493 76.323 3;4 8.7145E-202 97360 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 179.19 172.16 472070000 221890000 197520000 0 0 0 0 0 0 0 0 0 0 0 0 52659000 13395 1208 12178 112810;112811;112812;112813 90223;90224;90225;90226 90223 3 ENAPAIIFIDEIDAIATK Unmodified 1943.0252 0.025158703 1482 P43686 PSMC4 26S protease regulatory subunit 6B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0.5 1 6 1 2 4 2 103.27 100.1 2;3 3.137E-27 121351 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.19 79.247 212680000 84902000 124390000 3386800 0 0 0 0 0 0 0 0 0 0 0 0 13396 1482 12179 112814;112815;112816;112817;112818;112819;112820;112821 90227;90228;90229;90230;90231;90232;90233 90232 7 ENAPKPQDAAEVSSEQEK Unmodified 1955.9072 0.90722841 2453 Q14865 ARID5B AT-rich interactive domain-containing protein 5B yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 27.971 28.26 3 6.878E-11 30117 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 85.203 76.106 43773000 0 0 0 0 0 0 4930400 6617100 3675300 3988900 5809600 7330000 6688100 4734000 0 13397 2453 12180 112822;112823;112824;112825;112826;112827;112828;112829;112830 90234;90235;90236;90237;90238;90239;90240 90240 6 ENAQLLNMPVVK Unmodified 1354.7279 0.72787125 2855 Q68CZ6 HAUS3 HAUS augmin-like complex subunit 3 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 75.573 75.626 2 0.017297 87052 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 55.064 40.384 45265000 0 0 0 0 2620300 6674200 0 4369900 0 6069200 0 12606000 4500500 8424900 0 13398 2855 12181 112831;112832;112833;112834;112835;112836;112837 90241;90242;90243;90244 90241 2 ENASAGVER Unmodified 931.43592 0.43592298 1649 P51153 RAB13 Ras-related protein Rab-13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 7.1476 7.2432 2 0.010773 5212 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 63.816 17.39 36919000 0 0 0 2594900 3380500 3272800 4614100 5587100 3269100 2663800 6945900 2353200 0 2237400 0 13399 1649 12182 112838;112839;112840;112841;112842;112843;112844;112845;112846;112847 90245;90246;90247 90245 3 ENASAGVERLLLGNK Unmodified 1569.8475 0.84746911 1649 P51153 RAB13 Ras-related protein Rab-13 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 81.175 76.039 3 0.0091775 97436 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 37.657 29.874 38941000 22385000 10932000 5623800 0 0 0 0 0 0 0 0 0 0 0 0 13400 1649 12183 112848;112849;112850 90248;90249 90248 2 ENASPAPGTTAEEAMSR Oxidation (M) 1733.7526 0.75264203 1502 P46379 BAG6 Large proline-rich protein BAG6 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 26.299 26.406 2 5.5229E-05 27725 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 74.46 63.631 11981000 0 0 0 0 1785500 3403200 0 0 0 0 0 6792400 0 0 0 13401 1502 12184 112851;112852;112853 90250;90251 90251 2371 2 ENASPAPGTTAEEAMSR Unmodified 1717.7577 0.7577274 1502 P46379 BAG6 Large proline-rich protein BAG6 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 41.958 42.231 2 1.0778E-29 46135 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 117.93 111.55 47818000 0 0 0 0 4262300 4750900 4795300 0 0 0 5520800 7367600 4517600 6702700 9901100 13402 1502 12184 112854;112855;112856;112857;112858;112859;112860;112861;112862 90252;90253 90253 2 ENASQCFEK Unmodified 1111.4604 0.46042317 2945 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16.759 16.337 2 0.0030438 19794 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.37 96.585 200300000 3522600 18742000 0 5460000 6519100 11099000 6195600 6370500 7953400 12192000 15292000 26458000 23409000 25260000 31828000 13403 2945 12185 112863;112864;112865;112866;112867;112868;112869;112870;112871;112872;112873;112874;112875;112876 90254;90255;90256;90257;90258;90259;90260;90261;90262;90263;90264 90257 9 ENATNGVQQLSK Unmodified 1287.6419 0.64189301 4814 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 26.441 26.679 2 2.5483E-05 28023 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 114.89 83.665 73492000 0 0 0 0 5270300 5155700 5674400 7730000 4754400 7782800 6029000 10581000 9111800 5037400 6365000 13404 4814 12186 112877;112878;112879;112880;112881;112882;112883;112884;112885;112886;112887 90265;90266;90267;90268;90269;90270;90271;90272;90273 90272 9 ENAVPATEGVLINK Unmodified 1453.7777 0.77765821 2565 Q15714 TSC22D1 TSC22 domain family protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 65.649 59.732 2 0.01306 76369 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 53.013 39.421 35052000 0 35052000 0 0 0 0 0 0 0 0 0 0 0 0 0 13405 2565 12187 112888 90274 90274 1 ENAYDLEANLAVLK Unmodified 1561.7988 0.79878758 4851 Q9UBQ5 EIF3K Eukaryotic translation initiation factor 3 subunit K yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 85.242 83.903 2 1.7216E-18 103871 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 155 139.37 1150900000 32564000 1023600000 9152000 0 0 11268000 5263700 9575200 0 11832000 8078300 8275400 4781600 8342400 18249000 13406 4851 12188 112889;112890;112891;112892;112893;112894;112895;112896;112897;112898;112899;112900;112901;112902 90275;90276;90277;90278;90279;90280;90281;90282;90283;90284;90285;90286;90287;90288;90289 90278 15 ENCGIYFPEIK Unmodified 1368.6384 0.63838754 2797 Q5TFE4 NT5DC1 5'-nucleotidase domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 81.674 78.057 2 0.018173 96716 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.652 71.04 167270000 0 165400000 1869600 0 0 0 0 0 0 0 0 0 0 0 0 13407 2797 12189 112903;112904 90290 90290 1 ENCPVPGKPGEAVAAR Unmodified 1650.8148 0.81478877 778 P04183 TK1 Thymidine kinase, cytosolic yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 33.246 33.348 3 0.00058005 36328 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 46.89 40.008 151360000 0 0 0 14169000 13017000 9956400 11533000 10471000 7267400 14646000 0 37495000 18136000 14668000 0 13408 778 12190 112905;112906;112907;112908;112909;112910;112911;112912;112913;112914 90291;90292;90293;90294;90295;90296;90297;90298;90299 90293 5 ENCPVPGKPGEAVAARK Unmodified 1778.9098 0.90975179 778 P04183 TK1 Thymidine kinase, cytosolic yes yes 0 0 2 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 28.14 27.451 3;4 0.0019957 35270 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 71.354 67.629 166270000 14555000 0 39744000 6435800 5937200 5417900 11817000 10589000 6537800 9270600 9622300 14333000 8373300 6915800 16722000 13409 778 12191 112915;112916;112917;112918;112919;112920;112921;112922;112923;112924;112925;112926;112927;112928;112929 90300;90301;90302;90303;90304;90305;90306 90304 2 ENDAHLVEVNLNNIK Unmodified 1720.8744 0.87441214 4746 Q9NYL9 TMOD3 Tropomodulin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.7 2.85 2 2 19 4 1 2 2 2 2 2 2 1 2 2 1 72.031 71.352 2;3 3.9883E-28 81679 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 109.07 96.918 641880000 0 199390000 0 12262000 24532000 59928000 27698000 37928000 31841000 47814000 46873000 77543000 45618000 30455000 0 13410 4746 12192 112930;112931;112932;112933;112934;112935;112936;112937;112938;112939;112940;112941;112942;112943;112944;112945;112946;112947;112948;112949;112950;112951;112952 90307;90308;90309;90310;90311;90312;90313;90314;90315;90316;90317;90318;90319;90320;90321;90322;90323;90324;90325 90317 18 ENDAVTIQVLNQLIQK Unmodified 1824.9945 0.99452728 3961 Q96QK1 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.78 3.79 3 2 4 4 1 1 1 1 1 95.363 93.36 2;3 4.4153E-116 114800 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 220.81 197.06 501570000 0 484270000 6236100 0 0 0 0 0 0 2448700 2467500 0 0 1518700 4626800 13411 3961 12193 112953;112954;112955;112956;112957;112958;112959;112960;112961 90326;90327;90328;90329;90330;90331;90332;90333 90327 7 ENDENCGPTTTVFVGNISEK Unmodified 2209.9797 0.97974143 1596 P49756 RBM25 RNA-binding protein 25 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 70.28 70.355 2;3 7.8582E-87 80238 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 210.34 205.06 577670000 0 0 0 27762000 28844000 39100000 48395000 38881000 46373000 51438000 59190000 63294000 45495000 48202000 80692000 13412 1596 12194 112962;112963;112964;112965;112966;112967;112968;112969;112970;112971;112972;112973;112974;112975;112976;112977;112978;112979;112980;112981;112982;112983;112984;112985 90334;90335;90336;90337;90338;90339;90340;90341;90342;90343;90344;90345;90346;90347;90348;90349;90350;90351;90352;90353 90338 16 ENDFDRLVLQYAPSA Unmodified 1736.837 0.836964 190 O14579 COPE Coatomer subunit epsilon yes yes 0 0 1 By MS/MS By MS/MS 2.25 0.433 3 1 3 1 91.908 88.374 2 4.8881E-41 109521 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 152.07 126.59 497520000 0 489250000 8277100 0 0 0 0 0 0 0 0 0 0 0 0 13413 190 12195 112986;112987;112988;112989 90354;90355;90356;90357;90358;90359;90360 90355 7 ENDKTEEMPNDSVLENK Oxidation (M) 2006.8739 0.87387937 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 1 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.1 3.91 4 1 5 1 3 1 1 1 1 1 1 33.456 30.964 2;3 2.1991E-07 39687 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.24 79.309 155150000 2678300 112880000 1451400 0 0 0 5251100 0 3313500 0 16593000 12987000 0 0 0 13414 1564 12196 112990;112991;112992;112993;112994;112995;112996;112997;112998;112999 90361;90362;90363;90364;90365;90366;90367;90368 90362 2484 7 ENDKTEEMPNDSVLENK Unmodified 1990.879 0.87896475 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.08 3.33 2 1 9 3 1 1 1 1 1 1 1 2 45.461 44.419 2;3 7.5504E-62 56837 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 190.03 179.85 320870000 0 149710000 0 0 0 0 11260000 9994000 0 9390400 23295000 29647000 14305000 20146000 53123000 13415 1564 12196 113000;113001;113002;113003;113004;113005;113006;113007;113008;113009;113010;113011 90369;90370;90371;90372;90373;90374;90375;90376 90371 8 ENDLLPLEK Unmodified 1069.5655 0.56554017 2200 Q12872 SFSWAP Splicing factor, suppressor of white-apricot homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 64.276 64.309 2 0.03094 73709 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 47.96 24.917 51403000 0 0 0 3177000 3465600 3999400 5683100 3861900 4778600 4958000 6781300 9483400 5214500 0 0 13416 2200 12197 113012;113013;113014;113015;113016;113017;113018;113019;113020;113021 90377;90378 90377 2 ENDLNAEPNLK Unmodified 1255.6044 0.60444487 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.922 38.092 2 6.3305E-05 42589 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 113.62 95.182 141100000 0 0 0 8309300 8311900 12226000 8766300 10345000 8221800 15327000 13109000 16348000 18686000 0 21451000 13417 3443 12198 113022;113023;113024;113025;113026;113027;113028;113029;113030;113031;113032;113033 90379;90380;90381;90382;90383;90384;90385;90386;90387;90388;90389;90390 90390 12 ENDLVFLAPER Unmodified 1301.6616 0.66156582 3078 Q7Z333 SETX Probable helicase senataxin yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 78.507 78.655 2 0.0061228 91260 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 57.348 41.686 11439000 0 0 0 0 0 0 2763600 0 1615700 0 0 3686400 3373700 0 0 13418 3078 12199 113034;113035;113036;113037;113038 90391;90392;90393 90392 3 ENDLVFLAPERINEEK Unmodified 1914.9687 0.96870646 3078 Q7Z333 SETX Probable helicase senataxin yes yes 0 0 1 By MS/MS 2 0 1 1 84.638 76.507 3 0.013907 99983 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 38.613 27.092 5869000 5869000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13419 3078 12200 113039 90394 90394 1 ENDLYVLPPLQEEEK Unmodified 1814.8938 0.89381018 1238 P28715 ERCC5 DNA repair protein complementing XP-G cells yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.869 82.929 2 0.00011632 96171 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 90.653 66.362 48371000 0 0 0 1511600 2357200 3966900 2662700 3555400 3269900 3605600 4678600 5608500 6430300 0 10725000 13420 1238 12201 113040;113041;113042;113043;113044;113045;113046;113047;113048;113049;113050;113051 90395;90396;90397;90398;90399;90400;90401;90402;90403;90404;90405 90404 11 ENDMLSHTANGLSK Unmodified 1515.6988 0.69875596 2894 Q6N021 TET2 Methylcytosine dioxygenase TET2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 48.533 43.271 2 0.0015468 56344 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.412 19.299 22736000 0 22736000 0 0 0 0 0 0 0 0 0 0 0 0 0 13421 2894 12202 113052;113053 90406 90406 1 ENDNDSGTGSTADTSSIDLNLSISSFLSK Unmodified 2974.3527 0.35271302 4365 Q9H2G2 SLK STE20-like serine/threonine-protein kinase yes yes 0 0 0 By MS/MS 2 0 1 1 96.634 94.157 3 0.047299 113903 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 15.641 13.475 3030000 0 0 3030000 0 0 0 0 0 0 0 0 0 0 0 0 13422 4365 12203 113054 90407 90407 1 ENDPEANIDTIYDR Unmodified 1663.7326 0.73255851 2456 Q14966 ZNF638 Zinc finger protein 638 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 63.185 63.135 2 0.0002611 72469 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 79.82 64.848 13827000 0 0 0 0 1989400 0 0 0 0 0 0 0 7205200 4632600 0 13423 2456 12204 113055;113056;113057;113058;113059;113060 90408;90409;90410;90411;90412;90413 90413 6 ENDPIQGPDGK Unmodified 1168.536 0.53603095 4558 Q9NQ38 SPINK5 Serine protease inhibitor Kazal-type 5;Hemofiltrate peptide HF6478;Hemofiltrate peptide HF7665 yes no 0 0 0 By MS/MS 10 0 1 1 24.527 24.344 2 0.029655 25942 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 54.416 36.381 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13424 4558 12205 113061 90414 90414 1 ENDPSSVLLFLVGSK Unmodified 1603.8457 0.84573777 4265 Q9BZG1 RAB34 Ras-related protein Rab-34 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 97.141 97.241 2 2.8453E-14 112957 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.55 85.858 41646000 0 0 0 0 1473600 2045900 1405600 4166700 3262400 8461100 0 4655300 1876100 3771800 10527000 13425 4265 12206 113062;113063;113064;113065;113066;113067;113068;113069;113070;113071;113072 90415;90416;90417;90418;90419;90420;90421;90422;90423;90424;90425 90418 11 ENDPSVMR Unmodified 946.41783 0.41783007 2231 Q13085 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 18.109 18.273 2 0.039356 17178 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.703 33.142 29489000 0 0 0 0 1704300 3795600 1939500 2898900 1417200 4629700 0 5854000 0 0 7250000 13426 2231 12207 113073;113074;113075;113076;113077;113078;113079;113080 90426 90426 1 ENDPSVMRSPSAGK Unmodified 1473.6882 0.68819128 2231 Q13085 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes yes 0 0 1 By MS/MS 2 0 1 1 26.659 22.399 2 0.044006 29612 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.229 46.588 11115000 0 11115000 0 0 0 0 0 0 0 0 0 0 0 0 0 13427 2231 12208 113081 90427 90427 1 ENDWYLAYK Unmodified 1200.5451 0.54513908 1474 P43246 MSH2 DNA mismatch repair protein Msh2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.216 70.29 2 0.037213 80645 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 52.716 29.288 97782000 0 0 0 3536800 3120700 10896000 5280400 6905200 5704400 7802400 10321000 12849000 7454000 7497800 16414000 13428 1474 12209 113082;113083;113084;113085;113086;113087;113088;113089;113090;113091;113092;113093 90428;90429 90429 2 ENEALLLR Unmodified 956.5291 0.52909508 3735 Q96AC1 FERMT2 Fermitin family homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.697 51.845 2 0.00622 57807 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 102.71 51.748 301810000 0 0 0 14174000 13134000 39319000 18946000 17248000 9632600 35353000 34682000 32709000 22684000 26307000 37625000 13429 3735 12210 113094;113095;113096;113097;113098;113099;113100;113101;113102;113103;113104;113105 90430;90431;90432;90433;90434;90435;90436;90437;90438;90439;90440;90441 90439 12 ENEALLLRFK Unmodified 1231.6925 0.69247202 3735 Q96AC1 FERMT2 Fermitin family homolog 2 yes yes 0 0 1 By MS/MS 2 0 1 1 79.673 71.543 3 0.015285 93899 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.246 48.559 28056000 28056000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13430 3735 12211 113106 90442 90442 1 ENECDPEEDLGK Unmodified 1433.5617 0.56165336 584 O94782 USP1 Ubiquitin carboxyl-terminal hydrolase 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 32.262 32.477 2 0.00099499 35394 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 84.658 73.168 22633000 0 0 0 0 2095900 2726000 0 3202800 0 2285000 4703400 0 3027200 1560400 3031700 13431 584 12212 113107;113108;113109;113110;113111;113112;113113;113114 90443;90444;90445 90445 3 ENEDENSSSTNLCVEDLQK Unmodified 2209.9281 0.92809979 4617 Q9NRZ9 HELLS Lymphoid-specific helicase yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 54.327 54.428 2 5.1182E-08 61741 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 106.32 104.49 35213000 0 0 0 0 3173000 4317100 5321600 0 3326700 4698300 6100400 0 4445200 3830800 0 13432 4617 12213 113115;113116;113117;113118;113119;113120;113121;113122 90446;90447;90448;90449;90450;90451;90452 90447 7 ENEELTRICDDLISK Unmodified 1833.8778 0.87784254 5273 Q9Y6A5 TACC3 Transforming acidic coiled-coil-containing protein 3 yes yes 0 0 1 By MS/MS 2 0 1 1 82.026 77.321 3 0.023648 96087 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 44.294 27.988 26540000 0 26540000 0 0 0 0 0 0 0 0 0 0 0 0 0 13433 5273 12214 113123 90453 90453 0 ENEFSFEDNAIR Unmodified 1469.6423 0.64228694 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.258 69.334 2 2.5399E-05 79549 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 93.667 82.073 93934000 0 0 0 5811300 5636800 10196000 6342700 5136800 5436000 7486100 9562200 13475000 7817200 7061000 9972700 13434 2451 12215 113124;113125;113126;113127;113128;113129;113130;113131;113132;113133;113134;113135 90454;90455;90456;90457;90458;90459;90460;90461;90462;90463;90464;90465 90459 11 ENELQAGPWNTGR Unmodified 1470.6852 0.68515481 413 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 2 58.143 58.246 2 1.1689E-12 66469 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 127.42 73.741 65810000 0 0 0 7446200 5504100 0 7594500 5231400 0 0 8853400 11050000 9094900 0 11036000 13435 413 12216 113136;113137;113138;113139;113140;113141;113142;113143;113144 90466;90467;90468;90469;90470;90471;90472;90473;90474;90475;90476;90477;90478;90479 90473 13 ENELRALEEELAGLK Unmodified 1712.8945 0.89447888 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 0 1 By MS/MS By MS/MS 2.43 0.495 4 3 3 4 97.219 92.099 2;3 3.8593E-66 115244 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 176.4 132.61 353020000 242380000 110630000 0 0 0 0 0 0 0 0 0 0 0 0 0 13436 643 12217 113145;113146;113147;113148;113149;113150;113151 90480;90481;90482;90483;90484;90485;90486 90486 7 ENEMLVTVAHFHK Oxidation (M) 1569.761 0.76096229 3702 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 0 1 0 By MS/MS 2 0 1 1 58.567 50.361 3 0.0032234 68634 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.205 46.672 17112000 17112000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13437 3702 12218 113152 90487;90488 90488 5275 2 ENEMLVTVAHFHK Unmodified 1553.766 0.76604767 3702 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 0 0 0 By MS/MS 2 0 1 1 76.62 68.489 4 0.038626 90293 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 33.273 20.293 5141100 5141100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13438 3702 12218 113153 90489 90489 0 ENENGEYTEHLHSASCQIK Unmodified 2244.9706 0.97057373 2192 Q12800 TFCP2 Alpha-globin transcription factor CP2 yes yes 0 0 0 By MS/MS 2 0 1 1 40.456 36.846 3 0.00041863 46532 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 53.278 45.09 4966300 0 0 4966300 0 0 0 0 0 0 0 0 0 0 0 0 13439 2192 12219 113154 90490;90491 90491 2 ENENIGDQLR Unmodified 1186.5578 0.55782903 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 34.209 34.459 2 0.038862 37866 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 64.04 26.313 86009000 0 0 0 0 5062200 6274200 7611600 0 7423700 0 17420000 18531000 10155000 0 13531000 13440 2446 12220 113155;113156;113157;113158;113159;113160;113161;113162;113163 90492;90493 90492 2 ENENVTVDK Unmodified 1046.488 0.48801813 4229 Q9BXM9 FSD1L FSD1-like protein yes yes 0 0 0 By MS/MS 2 0 1 1 8.4959 5.2483 2 0.050439 7771 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.324 30.324 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13441 4229 12221 113164 90494 90494 1 ENEQSLLEYLEK Unmodified 1493.725 0.72495394 1694 P52701 MSH6 DNA mismatch repair protein Msh6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 84.134 84.266 2 2.4706E-05 97603 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 110.39 78.453 35303000 0 0 0 0 0 5513800 0 0 0 0 6528500 6559300 0 5531500 11170000 13442 1694 12222 113165;113166;113167;113168;113169;113170;113171 90495;90496;90497;90498;90499;90500;90501 90495 7 ENERFFGDSAASMAIK Unmodified 1771.8199 0.81993373 5206 Q9Y4L1 HYOU1 Hypoxia up-regulated protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 2 1 1 74.527 69.468 3 0.00019636 85142 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 87.148 76.867 98257000 12438000 64236000 21582000 0 0 0 0 0 0 0 0 0 0 0 0 13443 5206 12223 113172;113173;113174;113175 90502;90503;90504;90505 90505 4 ENERFFGDSAASMAIK Oxidation (M) 1787.8148 0.81484835 5206 Q9Y4L1 HYOU1 Hypoxia up-regulated protein 1 yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 62.778 56.742 3 0.0039972 70887 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 83.37 74.573 59574000 16601000 0 42973000 0 0 0 0 0 0 0 0 0 0 0 0 13444 5206 12223 113176;113177 90506 90506 6603 0 ENERWNVISK Unmodified 1273.6415 0.64149908 366 O43776 NARS Asparagine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 47.175 41.355 3 0.03538 57348 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.676 42.045 340110000 296570000 0 43539000 0 0 0 0 0 0 0 0 0 0 0 0 13445 366 12224 113178;113179 90507 90507 0 ENESLTHSTDR Unmodified 1287.5691 0.569122 3581 Q8WX93 PALLD Palladin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 2 2 2 2 2 2 9.47 9.5835 2;3 0.00060344 8059 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 93.111 87.745 303200000 0 0 0 23445000 20831000 25505000 35741000 21679000 18347000 24859000 0 25102000 32869000 32919000 41907000 13446 3581 12225 113180;113181;113182;113183;113184;113185;113186;113187;113188;113189;113190;113191;113192;113193;113194;113195;113196;113197;113198;113199;113200;113201 90508;90509;90510;90511;90512;90513;90514;90515;90516 90512 4 ENESPDVRR Unmodified 1100.521 0.52104959 3839 Q96FV9 THOC1 THO complex subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 7.6018 7.7224 2 0.027931 6122 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 105.57 33.083 30143000 0 0 0 846490 1058000 1247900 1015600 1552300 1410700 3192800 9730200 0 3283700 1856500 4948800 13447 3839 12226 113202;113203;113204;113205;113206;113207;113208;113209;113210;113211;113212 90517 90517 1 ENETLIQR Unmodified 1001.5142 0.5141733 2916 Q6P1J9 CDC73 Parafibromin yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 27.591 27.776 2 0.011813 29380 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 114.78 68.412 319940000 0 0 0 20232000 24174000 28887000 24425000 23137000 16627000 28366000 35916000 68657000 0 1450400 48068000 13448 2916 12227 113213;113214;113215;113216;113217;113218;113219;113220;113221;113222;113223 90518;90519;90520;90521;90522 90521 1 ENEVEEVK Unmodified 974.45566 0.45565537 3405 Q8NC51 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 15.329 15.552 2 0.0060877 14022 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 103.83 17.039 995580000 0 0 0 0 38553000 0 69798000 59853000 53330000 69834000 150750000 149230000 111010000 144890000 148330000 13449 3405 12228 113224;113225;113226;113227;113228;113229;113230;113231;113232;113233 90523;90524;90525;90526;90527;90528;90529;90530;90531;90532;90533 90530 8 ENEVEEVKEEGPK Unmodified 1514.71 0.71003215 3405 Q8NC51 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.32 3.22 5 1 22 2 3 1 2 2 1 2 2 1 2 2 2 2 2 2 30.647 29.743 2;3 1.5738E-08 40456 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 115.18 102.6 935920000 43034000 221040000 5300700 61924000 50353000 9756400 57455000 47986000 12104000 31973000 66845000 112000000 69974000 53987000 92181000 13450 3405 12229 113234;113235;113236;113237;113238;113239;113240;113241;113242;113243;113244;113245;113246;113247;113248;113249;113250;113251;113252;113253;113254;113255;113256;113257;113258;113259;113260;113261 90534;90535;90536;90537;90538;90539;90540;90541;90542;90543;90544;90545;90546;90547;90548;90549;90550;90551;90552;90553 90544 16 ENEVFRDWNSR Unmodified 1450.6589 0.65894006 3167 Q86VM9 ZC3H18 Zinc finger CCCH domain-containing protein 18 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 51.282 51.38 3 0.007044 58163 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 42.789 37.286 77326000 0 0 0 6130600 0 0 6598900 9559900 14282000 0 9724100 0 13582000 17448000 0 13451 3167 12230 113262;113263;113264;113265;113266;113267;113268 90554;90555 90554 2 ENEVQSLHSK Unmodified 1169.5677 0.56766543 3151 Q86UP2 KTN1 Kinectin yes yes 0 0 0 By MS/MS 2.67 0.471 1 2 3 15.519 12.055 2;3 7.9192E-06 16008 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.85 89.5 47419000 0 47419000 0 0 0 0 0 0 0 0 0 0 0 0 0 13452 3151 12231 113269;113270;113271 90556;90557;90558 90556 3 ENFDEVVNDADIILVEFYAPWCGHCK Unmodified 3139.4056 0.40555741 982 P13667 PDIA4 Protein disulfide-isomerase A4 yes yes 0 0 0 By MS/MS 2 0 1 1 102.81 94.678 3 8.0945E-26 121727 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.679 90.838 33336000 33336000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13453 982 12232 113272 90559;90560 90559 2 ENFELQAAQEK Unmodified 1305.6201 0.62009493 472 O75179 ANKRD17 Ankyrin repeat domain-containing protein 17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 46.248 45.45 2 6.5186E-11 50268 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 182.16 159.42 190610000 0 56937000 0 11662000 13933000 0 17403000 0 19615000 0 0 41669000 0 29390000 0 13454 472 12233 113273;113274;113275;113276;113277;113278;113279;113280 90561;90562;90563;90564;90565;90566;90567;90568 90565 8 ENFLQQLYK Unmodified 1181.6081 0.60807369 2688 Q4LE39 ARID4B AT-rich interactive domain-containing protein 4B yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 79.982 80.07 2 0.014024 92238 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 58.917 34.023 26762000 0 0 0 632550 0 2631700 1497100 2533700 1967500 0 2147200 3801900 1590300 2032000 7928500 13455 2688 12234 113281;113282;113283;113284;113285;113286;113287;113288;113289;113290 90569 90569 1 ENFLSNSESK Unmodified 1153.5251 0.52513192 4928 Q9UIU6 SIX4 Homeobox protein SIX4 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 2 1 1 32.4 32.713 2 0.012486 35848 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 63.076 27.72 29824000 0 0 0 0 0 0 3992000 3910900 2909800 0 3415000 0 7610200 2614300 5371600 13456 4928 12235 113291;113292;113293;113294;113295;113296;113297;113298 90570;90571;90572;90573 90571 3 ENFNNVPDLELNPIRSK Unmodified 1998.0171 0.017053633 3764 Q96BS2 TESC Calcineurin B homologous protein 3 yes yes 0 0 1 By matching By MS/MS 2 0 2 1 1 81.999 78.375 3 0.0090079 94920 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 39.523 31.531 26666000 0 16830000 9835400 0 0 0 0 0 0 0 0 0 0 0 0 13457 3764 12236 113299;113300 90574 90574 1 ENFPNFLSACDK Unmodified 1440.6344 0.63436479 1295 P31151;Q86SG5 S100A7;S100A7A Protein S100-A7;Protein S100-A7A yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.56 1 1 13 2 2 1 1 1 1 1 1 1 1 1 1 1 79.09 78.574 2 2.5483E-05 91652 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 114.89 12.92 7471000000 0 90624000 0 5587100000 146460000 124690000 128850000 65665000 107280000 143720000 277270000 294810000 162170000 115550000 226830000 13458 1295 12237 113301;113302;113303;113304;113305;113306;113307;113308;113309;113310;113311;113312;113313;113314;113315 90575;90576;90577;90578;90579;90580;90581;90582;90583;90584;90585;90586;90587;90588;90589;90590 90587 15 ENFPNFLSACDKK Unmodified 1568.7293 0.72932781 1295 P31151;Q86SG5 S100A7;S100A7A Protein S100-A7;Protein S100-A7A yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 2 2 1 2 1 1 1 2 1 1 1 1 70.962 70.979 2;3 4.1168E-05 82160 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 80.905 60.478 657340000 0 0 0 537080000 16752000 4434100 14576000 5995700 4189100 7906000 19981000 17976000 13491000 7042400 7913800 13459 1295 12238 113316;113317;113318;113319;113320;113321;113322;113323;113324;113325;113326;113327;113328;113329;113330;113331 90591;90592;90593;90594;90595;90596;90597;90598;90599;90600;90601;90602;90603;90604 90601 13 ENFQNWLK Unmodified 1077.5243 0.52434406 1391 P37802 TAGLN2 Transgelin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 71.27 71.404 2 0.0097801 81713 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 81.784 49.429 167900000 0 0 0 0 4240500 14137000 6299700 10913000 4915100 10343000 19923000 20785000 7609200 17694000 51040000 13460 1391 12239 113332;113333;113334;113335;113336;113337;113338;113339;113340;113341;113342 90605;90606;90607;90608;90609;90610;90611;90612;90613;90614;90615 90610 10 ENFSCLTR Unmodified 1025.46 0.46002924 1422 P40925 MDH1 Malate dehydrogenase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 40.021 40.206 2 0.0095736 44498 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 82.452 68.781 149300000 0 0 0 4644500 1722500 0 3405200 0 0 3700000 22944000 27418000 0 20815000 64654000 13461 1422 12240 113343;113344;113345;113346;113347;113348;113349;113350 90616;90617;90618 90617 3 ENFSLDWCK Unmodified 1197.5125 0.51245874 1170 P23919 DTYMK Thymidylate kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.122 73.239 2 0.012702 84374 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 60.91 54.086 82345000 0 0 0 0 3860700 12934000 2779100 4863500 0 11804000 5987100 8361600 8327600 7439800 15988000 13462 1170 12241 113351;113352;113353;113354;113355;113356;113357;113358;113359;113360;113361;113362 90619;90620;90621;90622;90623;90624;90625;90626;90627;90628;90629;90630 90619 12 ENGADSILDLGLVDSSEK Unmodified 1860.8953 0.89526674 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 86.65 86.754 2 0.0027504 100259 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.32 49.366 10299000 0 0 0 0 0 3375700 0 0 0 0 0 0 0 2610300 4312900 13463 619 12242 113363;113364;113365 90631;90632 90632 2 ENGAFTVLVDNYVK Unmodified 1567.7882 0.7882229 1441 P41252 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 87.392 85.929 2 6.0903E-19 108248 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 125.97 66.903 664780000 13256000 595520000 9717500 0 0 3124700 0 4110400 3787800 6987700 6832400 4894400 0 3556600 12996000 13464 1441 12243 113366;113367;113368;113369;113370;113371;113372;113373;113374;113375;113376;113377;113378 90633;90634;90635;90636;90637;90638;90639;90640;90641;90642;90643;90644;90645;90646;90647;90648;90649;90650;90651 90644 19 ENGELLPILR Unmodified 1152.6503 0.65027285 570 O76003 GLRX3 Glutaredoxin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.631 81.693 2 0.003862 93968 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.37 70.461 127680000 0 0 0 3934300 2944600 17349000 6148600 5510600 4172500 13806000 14874000 10259000 9175200 11414000 28092000 13465 570 12244 113379;113380;113381;113382;113383;113384;113385;113386;113387;113388;113389;113390 90652;90653;90654;90655;90656;90657;90658;90659;90660;90661;90662 90655 11 ENGELLPILRGEN Unmodified 1452.7573 0.75725712 570 O76003 GLRX3 Glutaredoxin-3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 82.175 81.058 2 3.4359E-21 102324 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 183.85 167.14 1217700000 104540000 807470000 29500000 5481500 6586700 34853000 12411000 8971900 9026300 28399000 28415000 28748000 19237000 23808000 70232000 13466 570 12245 113391;113392;113393;113394;113395;113396;113397;113398;113399;113400;113401;113402;113403;113404;113405;113406 90663;90664;90665;90666;90667;90668;90669;90670;90671;90672;90673;90674 90671 11 ENGENVGLESK Unmodified 1174.5466 0.54659564 2977 Q6UVJ0 SASS6 Spindle assembly abnormal protein 6 homolog yes yes 0 0 0 By MS/MS 10 0 1 1 20.781 20.943 2 0.011834 21635 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 65.278 37.104 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13467 2977 12246 113407 90675 90675 1 ENGFTQHVYHK Unmodified 1358.6367 0.63674805 2961 Q6PKG0 LARP1 La-related protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 22.593 22.277 2;3 0.025732 33733 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.461 33.998 94551000 8755400 0 0 5135000 2271900 9114300 6787900 6269900 6074900 5139000 7235200 21424000 9789800 6554400 0 13468 2961 12247 113408;113409;113410;113411;113412;113413;113414;113415;113416;113417;113418;113419 90676;90677 90676 2 ENGGLDSEESYPYVAVDEICK Unmodified 2373.0318 0.031836578 444 O60911 CTSV Cathepsin L2 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 80.912 80.57 2 0.00035846 93481 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 57.679 52.601 6509000 0 0 0 5457700 1051300 0 0 0 0 0 0 0 0 0 0 13469 444 12248 113420;113421 90678 90678 1 ENGLPLEYQEK Unmodified 1318.6405 0.64049603 476 O75223 GGCT Gamma-glutamylcyclotransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 55.23 54.368 2 0.00026047 62509 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 91.658 74.222 887580000 0 527270000 0 123970000 25420000 0 0 40195000 14012000 30794000 35135000 32714000 0 28836000 29231000 13470 476 12249 113422;113423;113424;113425;113426;113427;113428;113429;113430;113431;113432;113433;113434;113435;113436;113437 90679;90680;90681;90682;90683;90684;90685;90686;90687;90688;90689;90690;90691;90692;90693;90694;90695;90696;90697;90698 90696 20 ENGPVVETVQVPLSK Unmodified 1594.8566 0.85663681 3490 Q8TCS8 PNPT1 Polyribonucleotide nucleotidyltransferase 1, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 76.117 71.28 2 0.001316 88975 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.229 44.376 20038000 0 20038000 0 0 0 0 0 0 0 0 0 0 0 0 0 13471 3490 12250 113438 90699 90699 1 ENGQPQNCGGQWR Unmodified 1529.643 0.64297242 95 CON__Q5D862;Q5D862 FLG2 Filaggrin-2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.753 22.959 2 0.00011377 22898 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 103.7 98.641 + 104250000 0 0 0 31373000 4147700 8178500 6758800 4754200 3560800 7921700 4223700 10550000 11480000 6749600 4555200 13472 95 12251 113439;113440;113441;113442;113443;113444;113445;113446;113447;113448;113449;113450 90700;90701;90702;90703;90704;90705;90706;90707;90708 90704 9 ENGRLPALEGTLQPQK Unmodified 1749.9373 0.93734675 3065 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 61.806 61.709 3 0.036008 70966 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 26.781 19.373 11052000 0 0 0 2095600 0 3223200 2437800 0 0 0 0 0 3295700 0 0 13473 3065 12252 113451;113452;113453;113454 90709 90709 1 ENGRSTNSHLGTSNMK Oxidation (M) 1747.7908 0.79075887 1349 P35251 RFC1 Replication factor C subunit 1 yes yes 0 1 1 By MS/MS 2 0 1 1 7.3082 3.7931 3 0.0031586 7008 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.828 44.029 10235000 10235000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13474 1349 12253 113455 90710 90710 2051 1 ENGRSTNSHLGTSNMK Unmodified 1731.7958 0.79584424 1349 P35251 RFC1 Replication factor C subunit 1 yes yes 0 0 1 By MS/MS 2 0 1 1 14.784 10.735 3 0.00014029 16010 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.506 69.928 11996000 11996000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13475 1349 12253 113456 90711 90711 1 ENGTGNMDEDLLVK Unmodified 1533.6981 0.69808726 1463 P42695 NCAPD3 Condensin-2 complex subunit D3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 60.676 60.806 2 0.0003697 68614 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.937 70.565 25128000 0 0 0 1875900 0 3002800 2228300 3085300 0 3264300 0 4196600 0 3070600 4404700 13476 1463 12254 113457;113458;113459;113460;113461;113462;113463;113464 90712;90713;90714;90715;90716 90714 5 ENGTSDESSSEQAAFNCFAQASSPAASTVGTSNLK Unmodified 3549.5438 0.54377805 255 O15119 TBX3 T-box transcription factor TBX3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 80.001 80.107 3 2.5578E-06 92829 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 30.628 28.925 57520000 0 0 0 0 4247900 3748300 4047800 4399800 3071400 7129800 7062900 9839000 0 4177800 9795100 13477 255 12255 113465;113466;113467;113468;113469;113470;113471;113472;113473;113474 90717;90718;90719 90719 3 ENGTVTAANASTLNDGAAALVLMTADAAK Oxidation (M) 2776.3549 0.35490205 1177 P24752 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 0 1 0 By MS/MS 2 0 1 1 92.918 88.007 3 6.0704E-07 109234 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 44.893 42.281 35109000 0 35109000 0 0 0 0 0 0 0 0 0 0 0 0 0 13478 1177 12256 113475 90720 90720 1704 1 ENGTVTAANASTLNDGAAALVLMTADAAK Unmodified 2760.36 0.35998743 1177 P24752 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 97.586 93.311 2;3 2.1106E-202 115295 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 207.9 196.48 167480000 0 167480000 0 0 0 0 0 0 0 0 0 0 0 0 0 13479 1177 12256 113476;113477;113478 90721;90722;90723;90724 90721 4 ENGVHSLIIEPVTSR Unmodified 1649.8737 0.87368386 3581 Q8WX93 PALLD Palladin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 2 65.43 65.65 2;3 0.00017014 74346 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.793 67.043 107810000 0 0 0 11701000 0 0 0 0 0 14785000 16429000 18842000 0 0 46052000 13480 3581 12257 113479;113480;113481;113482;113483;113484 90725;90726;90727;90728 90726 4 ENGVTHPIDYHTTDYVDEIK Unmodified 2345.0812 0.081170032 4019 Q99536 VAT1 Synaptic vesicle membrane protein VAT-1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.88 3.49 6 1 19 2 3 2 1 1 2 2 2 2 2 2 1 2 2 66.866 65.445 3;4 4.1814E-18 86244 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.84 96.549 416950000 30886000 199220000 24874000 3607300 2826200 13055000 0 10887000 9675700 16189000 18693000 22519000 9114300 13679000 41725000 13481 4019 12258 113485;113486;113487;113488;113489;113490;113491;113492;113493;113494;113495;113496;113497;113498;113499;113500;113501;113502;113503;113504;113505;113506;113507;113508;113509;113510 90729;90730;90731;90732;90733;90734;90735;90736;90737;90738;90739;90740;90741;90742;90743;90744;90745 90738 16 ENGVYLIDVK Unmodified 1148.6077 0.60773933 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 14 2 1 1 1 1 1 1 2 1 1 1 1 69.343 69.384 2 0.023004 79854 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 56.632 39.668 257340000 0 0 0 12676000 9432800 19911000 12129000 10397000 8917200 20199000 34665000 40173000 15948000 22665000 50230000 13482 1124 12259 113511;113512;113513;113514;113515;113516;113517;113518;113519;113520;113521;113522;113523;113524 90746;90747;90748;90749;90750;90751 90746 4 ENHATFMNELK Unmodified 1332.6132 0.61323542 4982 Q9UL03 INTS6 Integrator complex subunit 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 48.072 48.407 3 0.0053645 54670 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 38.96 34.621 87008000 0 0 0 0 0 0 3171300 11383000 5406800 10144000 10979000 12226000 12150000 6570200 14978000 13483 4982 12260 113525;113526;113527;113528;113529;113530;113531;113532;113533 90752;90753;90754;90755;90756 90755 5 ENHFLIFVK Unmodified 1145.6233 0.62332982 2165 Q08AF3 SLFN5 Schlafen family member 5 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 76.635 76.787 3 0.0035662 87976 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.27 51.01 38299000 0 0 0 0 0 3903400 1625100 2789600 3454500 2832800 1521800 4421000 3814400 3147400 10789000 13484 2165 12261 113534;113535;113536;113537;113538;113539;113540;113541;113542;113543 90757 90757 1 ENHLAASSVPDQK Unmodified 1394.679 0.6790068 2708 Q53SF7 COBLL1 Cordon-bleu protein-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 23.129 22.7 2;3 2.247E-08 22617 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 80.287 68.968 109260000 0 13204000 0 5446000 5576800 4102400 7100500 5699500 4615000 9404400 12336000 15606000 7793700 8719200 9658800 13485 2708 12262 113544;113545;113546;113547;113548;113549;113550;113551;113552;113553;113554;113555;113556;113557 90758;90759;90760;90761;90762;90763;90764;90765;90766;90767;90768;90769 90766 12 ENHNRTQQQVEAEVTNIK Unmodified 2137.0512 0.051207308 4475 Q9H9Q2 COPS7B COP9 signalosome complex subunit 7b yes yes 0 0 1 By MS/MS By MS/MS 2 0 4 2 2 51.252 45.282 3;4 6.5566E-55 57262 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 124.98 110.94 84760000 18815000 0 65944000 0 0 0 0 0 0 0 0 0 0 0 0 13486 4475 12263 113558;113559;113560;113561 90770;90771;90772;90773 90772 4 ENIDALEELK Unmodified 1172.5925 0.5924832 1323 P32754 HPD 4-hydroxyphenylpyruvate dioxygenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.68 3.89 7 1 11 1 5 2 1 1 1 1 1 1 1 1 1 1 1 70.08 68.331 2 1.1987E-05 86524 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 133.57 101.64 6733200000 347850000 5916900000 38801000 0 4639300 6881300 7733600 7600000 6273200 12881000 76277000 44763000 9676100 54821000 198130000 13487 1323 12264 113562;113563;113564;113565;113566;113567;113568;113569;113570;113571;113572;113573;113574;113575;113576;113577;113578;113579;113580 90774;90775;90776;90777;90778;90779;90780;90781;90782;90783;90784;90785;90786;90787;90788;90789;90790;90791;90792;90793;90794;90795;90796 90779 23 ENIEEFAMGPEEAVK Oxidation (M) 1707.7662 0.76616682 2904 Q6NXE6 ARMC6 Armadillo repeat-containing protein 6 yes yes 0 1 0 By MS/MS By matching 10 0 2 1 1 70.767 70.829 2 0.021982 81632 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 42.809 30.233 4455600 0 0 0 0 0 3021200 1434400 0 0 0 0 0 0 0 0 13488 2904 12265 113581;113582 90797 90797 0 ENIEGAQDATENSASSLAPGFIR Unmodified 2376.1193 0.11934645 1462 P42684 ABL2 Abelson tyrosine-protein kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 2 1 1 1 1 1 1 1 1 78.428 78.494 3 2.1859E-26 90634 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 94.671 86.483 162420000 0 0 0 3822100 14312000 14495000 12000000 14228000 11880000 19387000 16236000 12474000 9709000 10617000 23258000 13489 1462 12266 113583;113584;113585;113586;113587;113588;113589;113590;113591;113592;113593;113594;113595 90798;90799;90800;90801;90802;90803;90804;90805;90806;90807;90808;90809;90810;90811 90799 14 ENIGSVFGQK Unmodified 1077.5455 0.54547343 1739 P54278 PMS2 Mismatch repair endonuclease PMS2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.3 2.1 1 9 1 1 1 1 1 1 1 1 1 1 54.257 53.813 2 0.001017 60870 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 110.67 70.577 211270000 0 12109000 0 13784000 18421000 23689000 20359000 13800000 22189000 25907000 0 34765000 26242000 0 0 13490 1739 12267 113596;113597;113598;113599;113600;113601;113602;113603;113604;113605 90812;90813;90814;90815;90816;90817;90818;90819;90820;90821 90812 10 ENIIAVATTNNLYIFQDK Unmodified 2066.0684 0.068420501 1941 P63151 PPP2R2A Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform yes yes 0 0 0 By MS/MS 2 0 1 1 96.268 88.138 3 1.8784E-27 113892 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 92.439 86.715 8699900 8699900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13491 1941 12268 113606 90822 90822 1 ENIINDLSDK Unmodified 1159.5721 0.57208211 3509 Q8TDY2 RB1CC1 RB1-inducible coiled-coil protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 64.359 58.451 2 0.04793 74801 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 52.49 15.789 32239000 0 32239000 0 0 0 0 0 0 0 0 0 0 0 0 0 13492 3509 12269 113607 90823 90823 1 ENIKPNETSPSFSK Unmodified 1576.7733 0.77330111 4047 Q99700 ATXN2 Ataxin-2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.566 33.751 3 0.017278 36515 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 26.591 22.326 106800000 0 0 0 5579600 7182700 5877600 8622200 7080700 5882400 8346600 13800000 15481000 11178000 8042600 9726200 13493 4047 12270 113608;113609;113610;113611;113612;113613;113614;113615;113616;113617;113618;113619 90824;90825;90826;90827 90826 4 ENILEEFSK Unmodified 1107.5448 0.54480473 322 O43390 HNRNPR Heterogeneous nuclear ribonucleoprotein R yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 78.226 77.1 2 0.0031256 89037 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 105.1 44.624 1204000000 44383000 877340000 23117000 19232000 12933000 19080000 16186000 15377000 13606000 19829000 22654000 27968000 25583000 24815000 41916000 13494 322 12271 113620;113621;113622;113623;113624;113625;113626;113627;113628;113629;113630;113631;113632;113633;113634;113635 90828;90829;90830;90831;90832;90833;90834;90835;90836;90837;90838;90839;90840;90841;90842;90843;90844 90841 17 ENINDEPVDMSAR Oxidation (M) 1504.6464 0.64638604 3594 Q8WXI9 GATAD2B Transcriptional repressor p66-beta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 29.642 29.888 2 3.0887E-07 32007 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 96.113 91.501 66430000 0 0 0 5504200 0 7657600 4547200 4061800 5790600 5854100 6276900 7344200 8126600 5085700 6181600 13495 3594 12272 113636;113637;113638;113639;113640;113641;113642;113643;113644;113645;113646 90845;90846;90847;90848;90849;90850;90851;90852;90853;90854 90854 5090 10 ENINDEPVDMSAR Unmodified 1488.6515 0.65147142 3594 Q8WXI9 GATAD2B Transcriptional repressor p66-beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 44.992 45.174 2 1.8298E-09 50342 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 136.48 126.79 138440000 0 0 0 7755500 9190800 9382700 0 10740000 5129300 10965000 17394000 19387000 13962000 10472000 24059000 13496 3594 12272 113647;113648;113649;113650;113651;113652;113653;113654;113655;113656;113657;113658 90855;90856;90857;90858;90859;90860;90861;90862;90863;90864;90865;90866;90867;90868;90869;90870;90871 90869 17 ENINDEPVDMSARR Unmodified 1644.7526 0.75258245 3594 Q8WXI9 GATAD2B Transcriptional repressor p66-beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.251 38.442 3 0.00011417 42620 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 76.262 73.027 84037000 0 0 0 7889600 6855000 6033300 0 6282400 3619300 9413800 8613500 7891500 8983200 7379200 11077000 13497 3594 12273 113659;113660;113661;113662;113663;113664;113665;113666;113667;113668;113669;113670 90872;90873;90874;90875;90876;90877;90878;90879;90880;90881;90882;90883 90873 9 ENINVLDQERR Unmodified 1384.7059 0.70589025 3386 Q8NB46 ANKRD52 Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 40.349 40.477 3 0.00048251 43992 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 65.241 53.309 68929000 0 0 0 4035100 3594000 5338400 4974100 3001800 2217800 6815000 7749300 12721000 8592900 9889600 0 13498 3386 12274 113671;113672;113673;113674;113675;113676;113677;113678;113679;113680;113681 90884;90885;90886;90887 90886 4 ENIQDLVFR Unmodified 1132.5877 0.58767259 387 O60244 MED14 Mediator of RNA polymerase II transcription subunit 14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.33 78.39 2 0.0052023 90987 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 80.438 51.277 74255000 0 0 0 3362600 3857200 7230200 3615100 5043500 3200900 6437900 6392500 8745400 4879300 8552300 12937000 13499 387 12275 113682;113683;113684;113685;113686;113687;113688;113689;113690;113691;113692;113693 90888;90889;90890;90891;90892;90893;90894;90895;90896;90897 90896 9 ENIQDLVFRTK Unmodified 1361.7303 0.73031409 387 O60244 MED14 Mediator of RNA polymerase II transcription subunit 14 yes yes 0 0 1 By MS/MS 2 0 1 1 76.876 74.186 3 0.046024 90275 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 38.783 31.327 2671600 0 0 2671600 0 0 0 0 0 0 0 0 0 0 0 0 13500 387 12276 113694 90898 90898 1 ENIQTLLK Unmodified 957.5495 0.54949617 4792 Q9P0K7 RAI14 Ankycorbin yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 59.048 59.098 2 0.033366 66705 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 53.754 11.862 24597000 0 0 0 2356800 2567500 1888600 0 0 2601900 3259900 2994400 2984000 3236800 2706900 0 13501 4792 12277 113695;113696;113697;113698;113699;113700;113701;113702;113703 90899;90900 90900 2 ENIQTTNYNTALDFHSNSDVTK Unmodified 2511.1514 0.15137486 3453 Q8NG31 CASC5 Protein CASC5 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 69.381 64.142 3 2.7792E-12 78144 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 80.303 76.64 30863000 0 30863000 0 0 0 0 0 0 0 0 0 0 0 0 0 13502 3453 12278 113704;113705 90901;90902;90903;90904 90904 4 ENISENDREYSGDAQVDK Unmodified 2067.8981 0.89812029 4187 Q9BVI0 PHF20 PHD finger protein 20 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 30.78 30.902 3 0.01005 33640 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 30.536 26.816 17094000 0 0 0 0 0 5359000 2537400 0 4377000 0 0 0 0 4820900 0 13503 4187 12279 113706;113707;113708;113709 90905 90905 1 ENISLLEK Unmodified 944.51786 0.51786169 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 0 By MS/MS 3 0 1 1 55.625 50.758 2 0.023391 62638 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 82.452 26.922 8321400 0 8321400 0 0 0 0 0 0 0 0 0 0 0 0 0 13504 2495 12280 113710 90906 90906 1 ENITDAIWGSESNYEAIK Unmodified 2038.9484 0.94836495 3548 Q8WUM0 NUP133 Nuclear pore complex protein Nup133 yes yes 0 0 0 By MS/MS 3 0 1 1 86.558 83.336 2 2.4295E-05 99838 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 86.772 74.796 2996000 0 2996000 0 0 0 0 0 0 0 0 0 0 0 0 0 13505 3548 12281 113711 90907 90907 1 ENITEDEAK Unmodified 1047.472 0.47203371 2822 Q5VW32 BROX BRO1 domain-containing protein BROX yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.08 3.52 1 2 10 1 2 1 1 1 1 1 1 1 1 1 1 21.464 21.084 2 0.004238 13720 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 87.476 48.514 96457000 17384000 42575000 0 2375200 1781600 4214600 1881500 0 0 3280300 3985600 4045400 2064500 4418000 8451600 13506 2822 12282 113712;113713;113714;113715;113716;113717;113718;113719;113720;113721;113722;113723;113724 90908;90909;90910;90911;90912;90913 90908 6 ENITSDSLLTASMASESTVK Oxidation (M) 2098.994 0.99399451 2734 Q5JSH3 WDR44 WD repeat-containing protein 44 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 8 3.28 1 2 8 1 2 1 1 1 1 1 1 1 1 72.825 71.758 2 2.0175E-92 88553 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 166.3 158.39 138490000 441390 102410000 0 0 2891900 0 3529700 2883500 4319800 4115600 6389400 7564800 3942100 0 0 13507 2734 12283 113725;113726;113727;113728;113729;113730;113731;113732;113733;113734;113735 90914;90915;90916;90917 90914 4375 4 ENITSDSLLTASMASESTVK Unmodified 2082.9991 0.99907989 2734 Q5JSH3 WDR44 WD repeat-containing protein 44 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.25 3.34 4 2 2 1 4 1 1 1 82.07 78.294 2;3 3.1228E-181 97466 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 276.47 253.59 528000000 14335000 502810000 3189600 0 0 0 0 0 0 0 0 0 0 0 7660800 13508 2734 12283 113736;113737;113738;113739;113740;113741;113742;113743 90918;90919;90920;90921;90922;90923;90924 90918 6 ENIVNSFTDK Unmodified 1165.5615 0.56151742 3859 Q96GX5 MASTL Serine/threonine-protein kinase greatwall yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 54.883 54.316 2 0.0014192 61244 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 91.265 75.623 160440000 0 95178000 0 9123500 5125100 4568300 6926300 0 4381000 6290300 9646100 0 11445000 7754100 0 13509 3859 12284 113744;113745;113746;113747;113748;113749;113750;113751;113752;113753;113754 90925;90926;90927;90928;90929;90930;90931;90932;90933;90934;90935;90936 90930 12 ENLANIFREQQGK Unmodified 1545.79 0.78995423 1638 P50851 LRBA Lipopolysaccharide-responsive and beige-like anchor protein yes yes 0 0 1 By MS/MS 2 0 1 1 74.002 65.872 3 0.029225 87075 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.423 36.078 34405000 34405000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13510 1638 12285 113755 90937 90937 0 ENLAQAVEHRK Unmodified 1293.6789 0.67894722 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 1 By MS/MS 2 0 1 1 36.312 29.883 3 0.020289 41798 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.286 33.018 14413000 14413000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13511 2446 12286 113756 90938 90938 0 ENLATVEGNFASIDER Unmodified 1763.8326 0.83260691 2317 Q13561 DCTN2 Dynactin subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.819 76.879 2 9.1132E-20 87945 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 136.24 111.95 116550000 0 0 0 2656600 5900300 10830000 4477000 6858600 5103300 14065000 11811000 16051000 5289500 8453100 25051000 13512 2317 12287 113757;113758;113759;113760;113761;113762;113763;113764;113765;113766;113767;113768 90939;90940;90941;90942;90943;90944;90945;90946;90947;90948;90949;90950 90946 12 ENLCSTFCK Unmodified 1157.4845 0.48452943 60 CON__P02663 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 41.542 41.454 2 0.012211 46152 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 69.423 53.221 + 31920000 0 0 0 5342900 5413400 7074700 8756600 0 0 0 5332200 0 0 0 0 13513 60 12288 113769;113770;113771;113772;113773 90951;90952;90953;90954;90955 90952 5 ENLEETLQLEIENCK Unmodified 1860.8775 0.87750819 2510 Q15276 RABEP1 Rab GTPase-binding effector protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 88.769 85.115 3 0.00084514 105610 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.711 46.312 22712000 0 21761000 951110 0 0 0 0 0 0 0 0 0 0 0 0 13514 2510 12289 113774;113775 90956 90956 1 ENLETSPFITPGK Unmodified 1431.7246 0.72456001 4615 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 yes yes 0 0 0 By MS/MS 2 0 1 1 73.273 67.728 2 0.0021275 85586 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.93 81.058 45304000 0 45304000 0 0 0 0 0 0 0 0 0 0 0 0 0 13515 4615 12290 113776 90957 90957 1 ENLGLPVSTPFLEPPLGSDGPAVTFGK Unmodified 2738.4167 0.41669767 2989 Q6W2J9 BCOR BCL-6 corepressor yes yes 0 0 0 By MS/MS 2 0 1 1 99.482 94.769 3 4.5445E-07 117174 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 51.621 45.117 32343000 0 32343000 0 0 0 0 0 0 0 0 0 0 0 0 0 13516 2989 12291 113777 90958;90959 90958 2 ENLGQALK Unmodified 871.47633 0.47633123 607 O94927 HAUS5 HAUS augmin-like complex subunit 5 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 33.444 31.098 2 0.020792 40876 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.359 40.638 59255000 0 53071000 0 0 0 0 0 0 0 6184300 0 0 0 0 0 13517 607 12292 113778;113779 90960;90961 90961 2 ENLGQGWMTQK Oxidation (M) 1306.5976 0.59758535 834 P07099 EPHX1 Epoxide hydrolase 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 40.962 40.476 2 0.0052254 45529 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 52.79 34.35 4692600 0 0 0 0 4692600 0 0 0 0 0 0 0 0 0 0 13518 834 12293 113780;113781;113782 90962;90963;90964 90964 1016 3 ENLGWQK Unmodified 873.43447 0.43446642 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.911 31.1 2 0.018568 34014 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 111.69 73.317 445600000 0 0 0 102860000 23575000 29246000 25736000 83066000 19078000 20563000 28748000 47753000 33773000 13463000 17739000 13519 1029 12294 113783;113784;113785;113786;113787;113788;113789;113790;113791;113792;113793;113794 90965;90966;90967;90968;90969;90970;90971;90972 90971 7 ENLIAELEEK Unmodified 1186.6081 0.60813326 4435 Q9H7L9 SUDS3 Sin3 histone deacetylase corepressor complex component SDS3 yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 78.75 78.371 2 0.0017238 90506 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 89.08 72.606 161250000 0 82325000 0 0 4569700 6615000 0 7977700 5124300 10231000 11295000 8424600 0 9914900 14775000 13520 4435 12295 113795;113796;113797;113798;113799;113800;113801;113802;113803;113804 90973;90974;90975;90976 90975 3 ENLILQETSVIESLAADGSPGLK Unmodified 2383.2482 0.24823536 3617 Q92540 SMG7 Protein SMG7 yes yes 0 0 0 By MS/MS 2 0 1 1 101.05 96.338 3 7.3122E-53 119091 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.84 102.78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13521 3617 12296 113805 90977 90977 1 ENLISALEEAK Unmodified 1215.6347 0.63468237 1134 P22102 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 81.063 81.111 2 0.035565 93646 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 37.549 14.809 94395000 0 0 0 2738700 3689800 15729000 4633700 4899000 5493500 8638000 0 10028000 5351300 7721700 25472000 13522 1134 12297 113806;113807;113808;113809;113810;113811;113812;113813;113814;113815;113816 90978;90979 90979 2 ENLLDFIK Unmodified 990.5386 0.53859714 838 P07237 P4HB Protein disulfide-isomerase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 6 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 88.54 87.6 1;2 0.0035079 111756 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.29 69.932 3034000000 7188200 2508300000 204630 12118000 12038000 18719000 12672000 22093000 16834000 24557000 70923000 58632000 13505000 50698000 205490000 13523 838 12298 113817;113818;113819;113820;113821;113822;113823;113824;113825;113826;113827;113828;113829;113830;113831;113832;113833;113834 90980;90981;90982;90983;90984;90985;90986;90987;90988;90989;90990;90991 90985 10 ENLLESVQR Unmodified 1086.5669 0.56693715 4729 Q9NXR1 NDE1 Nuclear distribution protein nudE homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 54.499 54.814 2 0.012192 61009 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.679 7.9041 64341000 0 0 0 0 0 11089000 7627400 0 0 8899100 0 15903000 0 0 20822000 13524 4729 12299 113835;113836;113837;113838;113839 90992;90993;90994;90995;90996 90995 5 ENLLVEDSLMIECSARDILVK Unmodified 2446.2447 0.24474666 2175 Q0VDF9 HSPA14 Heat shock 70 kDa protein 14 yes yes 0 0 1 By MS/MS 2 0 1 1 100.08 91.947 3 0.00034592 118460 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.045 43.03 10273000 10273000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13525 2175 12300 113840 90997 90997 1 ENLPISGHK Unmodified 993.52434 0.52434406 78 CON__P20930;P20930 FLG Filaggrin yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 23.815 23.927 2 0.0037225 25595 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 122.19 46.333 + 978280000 0 0 0 650780000 28540000 30286000 26418000 83249000 14117000 35125000 42680000 0 40507000 26572000 0 13526 78 12301 113841;113842;113843;113844;113845;113846;113847;113848;113849;113850 90998;90999;91000;91001;91002;91003;91004;91005;91006;91007;91008 91007 9 ENLPQDYAR Unmodified 1104.52 0.51998696 2654 Q2NL82 TSR1 Pre-rRNA-processing protein TSR1 homolog yes yes 0 0 0 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 33.604 34.124 2 0.0083679 36487 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.825 49.304 51789000 0 0 0 0 0 0 0 0 0 11633000 11886000 10951000 0 0 17319000 13527 2654 12302 113851;113852;113853;113854 91009;91010 91009 2 ENLPVSSDGNLPQQAASAPSR Unmodified 2137.04 0.039973919 2333 Q13625 TP53BP2 Apoptosis-stimulating of p53 protein 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 1 2 2 2 2 2 1 2 2 59.386 59.598 2;3 9.5142E-16 67877 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 103.21 90.336 90029000 0 0 0 0 6462800 2632900 10959000 8285800 7926400 9669600 10550000 6197400 13309000 0 14035000 13528 2333 12303 113855;113856;113857;113858;113859;113860;113861;113862;113863;113864;113865;113866;113867;113868;113869;113870;113871 91011;91012;91013;91014;91015;91016;91017;91018;91019;91020 91018 8 ENLQFPDR Unmodified 1017.488 0.48795855 5045 Q9UNY4 TTF2 Transcription termination factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 46.68 46.951 2 0.027935 52336 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.047 12.653 34722000 0 0 0 0 3161300 0 3421000 0 0 5926000 5792600 8654800 0 0 7766400 13529 5045 12304 113872;113873;113874;113875;113876;113877 91021;91022 91022 2 ENLQPQSSGVQGQVPISPEPLQRPEMLK Oxidation (M) 3101.5815 0.58154794 4392 Q9H467 CUEDC2 CUE domain-containing protein 2 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 74.699 74.879 3 2.263E-18 86374 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 60.521 58.208 62742000 0 0 0 0 0 0 9503400 8210400 0 0 18865000 16472000 9691200 0 0 13530 4392 12305 113878;113879;113880;113881;113882 91023;91024;91025;91026 91024 5850 4 ENLQPQSSGVQGQVPISPEPLQRPEMLK Unmodified 3085.5866 0.58663332 4392 Q9H467 CUEDC2 CUE domain-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS 6 4 1 1 1 1 80.72 78.483 3 4.165E-31 90426 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.839 71.691 39335000 0 25088000 0 0 0 0 0 0 0 0 0 0 0 0 14247000 13531 4392 12305 113883;113884 91027;91028 91028 2 ENLREMIEESANK Unmodified 1561.7406 0.74062078 496 O75419 CDC45 Cell division control protein 45 homolog yes yes 0 0 1 By MS/MS 2 0 1 1 74.268 66.137 3 0.01577 87390 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.654 26.41 27326000 27326000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13532 496 12306 113885 91029 91029 1 ENLRQEIEK Unmodified 1157.6041 0.60405094 1029 P15924 DSP Desmoplakin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 26.016 26.176 3 0.023921 28114 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 65.535 28.344 222850000 0 0 0 46988000 16270000 13461000 15220000 57048000 12302000 10791000 0 19002000 25311000 0 6457100 13533 1029 12307 113886;113887;113888;113889;113890;113891;113892;113893;113894;113895 91030 91030 0 ENLSDERASGQSCTLPK Unmodified 1890.8742 0.87415414 4267 Q9BZI7 UPF3B Regulator of nonsense transcripts 3B yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.64 2.9 1 1 9 2 1 1 1 1 1 1 1 1 1 34.251 33.562 3 0.0030651 42838 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 50.653 39.011 63648000 0 27141000 0 0 4338700 2957100 4819000 2438900 2133900 4544900 3755300 6898100 0 0 4621700 13534 4267 12308 113896;113897;113898;113899;113900;113901;113902;113903;113904;113905;113906 91031;91032;91033 91031 3 ENLSYDLVPLK Unmodified 1289.6867 0.68671794 3633 Q92598 HSPH1 Heat shock protein 105 kDa yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.56 3.62 4 1 11 1 3 1 1 1 1 1 1 1 1 1 1 1 1 80.91 79.494 2 0.0017501 98770 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.624 67.844 3521500000 85637000 3153700000 37509000 6970600 5783000 0 8009100 8062700 6566900 13474000 32644000 36014000 10298000 24078000 92757000 13535 3633 12309 113907;113908;113909;113910;113911;113912;113913;113914;113915;113916;113917;113918;113919;113920;113921;113922 91034;91035;91036;91037;91038;91039;91040;91041;91042 91036 7 ENLTDLVVDTDTLGESTQPQR Unmodified 2330.1238 0.12376313 2427 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 84.503 84.643 3 7.3331E-06 97783 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.574 51.887 13559000 0 0 0 0 0 0 0 0 0 4901600 0 0 0 0 8657300 13536 2427 12310 113923;113924 91043;91044 91044 2 ENLTELSGGQR Unmodified 1202.5891 0.58912916 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 37.186 37.724 2 0.0084329 40659 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.528 23.646 15797000 0 0 0 0 0 0 0 0 0 0 0 0 9987600 0 5809700 13537 643 12311 113925;113926 91045 91045 1 ENLTRLFEK Unmodified 1148.619 0.61897272 3038 Q7KZ85 SUPT6H Transcription elongation factor SPT6 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 70.707 63.639 2 0.031826 84227 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.898 39.816 349720000 11919000 337800000 0 0 0 0 0 0 0 0 0 0 0 0 0 13538 3038 12312 113927;113928 91046 91046 0 ENLVEQSIPSNACSSLEVEAAISRK Unmodified 2730.3494 0.34942274 5009 Q9ULW0 TPX2 Targeting protein for Xklp2 yes yes 0 0 1 By MS/MS 3 0 1 1 83.589 79.926 3 0.04349 80850 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 18.403 11.291 618560 618560 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13539 5009 12313 113929 91047 91047 1 ENLVFLAQK Unmodified 1060.5917 0.59169534 1669;1450 P42229;P51692 STAT5A;STAT5B Signal transducer and activator of transcription 5A;Signal transducer and activator of transcription 5B no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.8 3.12 3 1 1 1 2 1 1 73.74 69.873 2 0.0016927 88461 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 133.9 108.01 146810000 9178400 117050000 4728800 0 0 0 0 0 0 0 0 0 0 0 15861000 13540 1450;1669 12314 113930;113931;113932;113933;113934 91048;91049;91050;91051;91052 91048 4 ENLVRPGIDHLGR Unmodified 1474.8005 0.80045934 5050 Q9UPN6 SCAF8 Protein SCAF8 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.239 47.402 3 0.0012384 53481 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 61.423 55.475 102680000 0 0 0 3989500 3458000 9459800 4052900 5528600 10219000 7327100 7295500 13176000 12506000 9496500 16168000 13541 5050 12315 113935;113936;113937;113938;113939;113940;113941;113942;113943;113944;113945;113946 91053;91054;91055;91056;91057;91058;91059;91060;91061;91062 91060 10 ENLYPYLGPSTLR Unmodified 1521.7827 0.78274359 4612 Q9NRW7 VPS45 Vacuolar protein sorting-associated protein 45 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 79.691 79.804 2 0.0013371 91949 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.726 40.754 44149000 0 0 0 0 2566000 0 2714600 3219900 2589800 5523400 5092500 6297200 3931900 3837700 8375700 13542 4612 12316 113947;113948;113949;113950;113951;113952;113953;113954;113955;113956 91063;91064;91065;91066;91067;91068;91069;91070;91071;91072 91066 10 ENMEAISPLK Oxidation (M) 1146.5591 0.55907458 716 O96019 ACTL6A Actin-like protein 6A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 39.412 39.402 2 0.00078127 43687 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 108.98 84.823 111780000 0 0 0 13471000 11151000 16495000 13413000 9340800 11948000 17203000 0 0 18762000 0 0 13543 716 12317 113957;113958;113959;113960;113961;113962;113963;113964 91073;91074;91075;91076;91077;91078;91079;91080;91081;91082;91083;91084 91078 856 12 ENMEAISPLK Unmodified 1130.5642 0.56415996 716 O96019 ACTL6A Actin-like protein 6A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 56.077 56.108 2 0.0024043 63913 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 83.948 70.681 125920000 0 0 0 9658700 8817100 13678000 10045000 12933000 6217500 15343000 0 0 0 15626000 33605000 13544 716 12317 113965;113966;113967;113968;113969;113970;113971;113972;113973;113974 91085;91086;91087;91088;91089;91090;91091;91092;91093;91094 91091 9 ENMEELLNLCSGK Unmodified 1535.696 0.69597877 4492 Q9HAW4 CLSPN Claspin yes yes 0 0 0 By MS/MS 2 0 1 1 85.362 80.618 2 0.0010086 100229 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.283 64.066 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13545 4492 12318 113975 91095 91095 1 ENMELEEK Unmodified 1020.4434 0.44337612 389 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 23.283 23.673 2 0.0087714 24026 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.064 21.584 12099000 0 0 0 0 0 0 0 0 0 6919200 0 0 1804100 0 3375200 13546 389 12319 113976;113977;113978 91096 91096 1 ENMNLSEAQVQALALSR Oxidation (M) 1888.9313 0.93127509 1498 P46100 ATRX Transcriptional regulator ATRX yes yes 0 1 0 By matching By matching By matching By matching By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 75.974 76.044 2 1.0964E-13 87884 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 92.935 70.889 24544000 0 0 0 0 2695500 2831800 3287400 2494300 2655600 5566300 0 5013400 0 0 0 13547 1498 12320 113979;113980;113981;113982;113983;113984;113985 91097 91097 2366 1 ENMPCGETAEFK Unmodified 1411.5748 0.574801 3340 Q8N573 OXR1 Oxidation resistance protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 47.359 41.796 2 0.012957 54448 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.977 64.674 10808000 0 10808000 0 0 0 0 0 0 0 0 0 0 0 0 0 13548 3340 12321 113986 91098 91098 1 ENMYAVQTLK Unmodified 1195.5907 0.59070906 5284 Q9Y6I3 EPN1 Epsin-1 yes yes 0 0 0 By MS/MS 2 0 1 1 56.248 50.433 2 0.0018245 65129 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.02 80.812 105670000 0 105670000 0 0 0 0 0 0 0 0 0 0 0 0 0 13549 5284 12322 113987 91099 91099 1 ENNIMITLETNIEHNLK Unmodified 2025.0201 0.0200901 4365 Q9H2G2 SLK STE20-like serine/threonine-protein kinase yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 97.539 92.158 3 0.00012007 115920 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.187 63.245 57617000 23409000 34209000 0 0 0 0 0 0 0 0 0 0 0 0 0 13550 4365 12323 113988;113989;113990 91100;91101 91101 2 ENNISEEVEAPEVEPR Unmodified 1839.8487 0.8486509 4405 Q9H4Z3 PCIF1 Phosphorylated CTD-interacting factor 1 yes yes 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 60.6 60.692 2 8.1518E-15 68686 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 112.43 94.162 31459000 0 0 0 2245800 1801800 2130300 2163500 2326700 1835100 0 5041100 4108000 0 4708600 5098100 13551 4405 12324 113991;113992;113993;113994;113995;113996;113997;113998;113999;114000 91102;91103;91104;91105;91106 91102 5 ENNLHESEYGDQEGK Unmodified 1747.7285 0.72853576 5068 Q9UQ84 EXO1 Exonuclease 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 17.425 17.609 3 0.0055301 17757 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 38.399 36.906 98268000 0 0 0 5536700 6311100 8153800 7597600 6641800 4934200 9526100 8326300 19023000 8346100 6377800 7493600 13552 5068 12325 114001;114002;114003;114004;114005;114006;114007;114008;114009;114010;114011;114012 91107;91108;91109;91110;91111 91107 5 ENNLSEEVLGK Unmodified 1230.6092 0.6091959 5100 Q9Y2H0 DLGAP4 Disks large-associated protein 4 yes yes 0 0 0 By MS/MS By MS/MS 10 0 3 2 1 57.029 56.617 2 0.035818 65190 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 37.508 14.437 32279000 0 0 0 21705000 0 0 10574000 0 0 0 0 0 0 0 0 13553 5100 12326 114013;114014;114015 91112 91112 1 ENNPVRGPYGK Unmodified 1229.6153 0.61528433 4558 Q9NQ38 SPINK5 Serine protease inhibitor Kazal-type 5;Hemofiltrate peptide HF6478;Hemofiltrate peptide HF7665 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching 10 0 5 1 1 1 1 1 19.486 19.624 3 0.01962 19889 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 39.148 24.941 17463000 0 0 0 5094100 1077200 0 0 6596000 0 0 0 2702200 1993900 0 0 13554 4558 12327 114016;114017;114018;114019;114020 91113 91113 1 ENNSAHNEQNSQIPTPTDGPSFTVMR Oxidation (M) 2886.2839 0.28386237 2708 Q53SF7 COBLL1 Cordon-bleu protein-like 1 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 63.97 63.871 3 2.4319E-08 72998 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 45.126 39.592 17402000 0 0 0 4553200 0 4529100 0 0 3594400 0 0 0 4725100 0 0 13555 2708 12328 114021;114022;114023;114024 91114 91114 4364 1 ENNTHPEWSFTTVR Unmodified 1716.7856 0.78559713 4811 Q9P289 STK26 Serine/threonine-protein kinase 26 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 62.802 62.889 3 0.0024139 71176 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 38.028 35.725 128210000 0 0 0 6988600 3945700 15516000 6555600 0 5371300 11994000 12802000 13452000 11096000 16229000 24256000 13556 4811 12329 114025;114026;114027;114028;114029;114030;114031;114032;114033;114034;114035 91115;91116;91117;91118;91119;91120 91118 5 ENNTHPEWSFTTVRK Unmodified 1844.8806 0.88056015 4811 Q9P289 STK26 Serine/threonine-protein kinase 26 yes yes 0 0 1 By MS/MS 10 0 1 1 49.514 50.225 3 0.027407 55769 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 15.121 2.9157 19576000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19576000 13557 4811 12330 114036 91121 91121 1 ENNVVFNR Unmodified 990.48829 0.4882929 346 O43615 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 31.281 31.459 2 0.006875 34007 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 92.822 64.335 195720000 0 0 0 0 22736000 23547000 28497000 0 21500000 0 37867000 0 0 21518000 40057000 13558 346 12331 114037;114038;114039;114040;114041;114042;114043 91122;91123;91124;91125;91126;91127 91125 4 ENNYLNQHVNR Unmodified 1399.6593 0.65927441 4233 Q9BXS6 NUSAP1 Nucleolar and spindle-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 26.719 26.829 3 0.047127 28817 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 23.016 3.4591 66483000 0 0 0 0 9257900 10999000 13360000 11286000 0 8097800 0 0 0 0 13481000 13559 4233 12332 114044;114045;114046;114047;114048;114049 91128 91128 1 ENPCQEQGDVIQIK Unmodified 1656.7777 0.77773456 4381 Q9H3P2 NELFA Negative elongation factor A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 51.765 51.716 2 1.8094E-05 58493 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 108.31 81.356 66681000 0 0 0 12522000 7026100 0 15338000 15575000 0 0 0 0 0 0 16220000 13560 4381 12333 114050;114051;114052;114053;114054 91129;91130;91131;91132;91133;91134 91131 6 ENPDIVNQSQQAQAR Unmodified 1696.8129 0.81287452 650 O95376 ARIH2 E3 ubiquitin-protein ligase ARIH2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 31.773 32.079 2 5.7538E-27 34045 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 132.32 106.89 33281000 0 0 0 0 0 5426600 0 3581500 0 5620200 5632800 0 3934000 2866200 6219900 13561 650 12334 114055;114056;114057;114058;114059;114060;114061 91135;91136;91137;91138;91139;91140;91141;91142;91143 91138 9 ENPDIVNQSQQAQAREALK Unmodified 2138.0716 0.071608399 650 O95376 ARIH2 E3 ubiquitin-protein ligase ARIH2 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 52.113 46.778 3 6.0338E-41 60779 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.47 108.08 35510000 0 35510000 0 0 0 0 0 0 0 0 0 0 0 0 0 13562 650 12335 114062;114063 91144;91145 91144 2 ENPDIYK Unmodified 877.41815 0.41814765 5123 Q9Y2W2 WBP11 WW domain-binding protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 21.707 21.946 2 0.050025 22885 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 63.148 16.484 351910000 0 0 0 0 23623000 24903000 32664000 29692000 28487000 39484000 37897000 41879000 29325000 29131000 34830000 13563 5123 12336 114064;114065;114066;114067;114068;114069;114070;114071;114072;114073;114074 91146 91146 1 ENPEDVLSPTSVATYLSSK Unmodified 2035.995 0.99498079 3992 Q96SN8 CDK5RAP2 CDK5 regulatory subunit-associated protein 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 95.378 88.864 2 1.4084E-05 110137 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.195 74.143 44940000 24940000 20000000 0 0 0 0 0 0 0 0 0 0 0 0 0 13564 3992 12337 114075;114076 91147 91147 1 ENPEFDLHFEK Unmodified 1403.6357 0.635745 4661 Q9NV70 EXOC1 Exocyst complex component 1 yes yes 0 0 0 By MS/MS 2 0 1 1 74.437 69.282 3 0.0039788 86888 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.121 49.33 36371000 0 36371000 0 0 0 0 0 0 0 0 0 0 0 0 0 13565 4661 12338 114077 91148 91148 1 ENPEYFPR Unmodified 1050.4771 0.47705951 4570 Q9NQG6 MIEF1 Mitochondrial dynamics protein MID51 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 42.885 43.144 2 0.0091721 47924 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 83.753 42.45 124890000 0 0 0 0 8816200 0 9839500 11611000 9543200 10611000 11923000 21354000 13190000 12012000 15992000 13566 4570 12339 114078;114079;114080;114081;114082;114083;114084;114085;114086;114087 91149;91150;91151;91152;91153;91154;91155;91156;91157 91153 9 ENPGFDFSGAEISGNYTK Unmodified 1931.8537 0.85373628 3561 Q8WVJ2 NUDCD2 NudC domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 77.781 76.661 2 5.479E-15 88741 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 118.13 106.91 602060000 10724000 505770000 0 1906200 2866200 8661200 5003800 0 4733800 9555000 10990000 9014700 5582500 7343300 19906000 13567 3561 12340 114088;114089;114090;114091;114092;114093;114094;114095;114096;114097;114098;114099;114100;114101 91158;91159;91160;91161;91162;91163;91164;91165;91166;91167;91168;91169;91170 91162 13 ENPGLTQDIIMK Oxidation (M) 1373.6861 0.68606601 4165 Q9BUL8 PDCD10 Programmed cell death protein 10 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.21 3.75 4 1 9 1 3 1 1 1 1 1 1 1 1 1 1 59.219 57.344 2 2.7005E-14 69825 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 135.86 122.9 1232300000 12405000 851670000 3583600 0 0 37619000 30894000 22539000 27462000 64516000 45996000 45412000 0 34426000 55737000 13568 4165 12341 114102;114103;114104;114105;114106;114107;114108;114109;114110;114111;114112;114113;114114;114115 91171;91172;91173;91174;91175;91176;91177;91178;91179;91180;91181;91182;91183;91184;91185;91186;91187 91182 5654 16 ENPGLTQDIIMK Unmodified 1357.6912 0.69115139 4165 Q9BUL8 PDCD10 Programmed cell death protein 10 yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 71.155 68.649 2 3.093E-05 86847 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.16 108 1278700000 0 1278200000 506650 0 0 0 0 0 0 0 0 0 0 0 0 13569 4165 12341 114116;114117 91188 91188 1 ENPGPSYAR Unmodified 989.45666 0.45665842 4406 Q9H568 ACTL8 Actin-like protein 8 yes yes 0 0 0 By MS/MS 10 0 1 1 15.97 16.483 2 0.046123 15474 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.245 30.733 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13570 4406 12342 114118 91189 91189 1 ENPLLPEEEEQR Unmodified 1481.6998 0.69980182 1974 P78344 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.947 52.093 2 1.2503E-21 58162 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 164.64 158.1 337500000 0 0 0 19941000 21198000 21992000 20938000 22347000 17038000 22266000 41229000 54776000 32347000 27986000 35444000 13571 1974 12343 114119;114120;114121;114122;114123;114124;114125;114126;114127;114128;114129;114130 91190;91191;91192;91193;91194;91195;91196;91197;91198;91199;91200;91201 91200 12 ENPLLPEEEEQRAIAK Unmodified 1864.9531 0.95305639 1974 P78344 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 1 2 2 1 1 2 2 2 2 2 60.224 60.329 2;3 4.69E-06 68742 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 100.93 80.724 415060000 0 0 0 22521000 29100000 16053000 42455000 34116000 18262000 28781000 46576000 70804000 39617000 32216000 34558000 13572 1974 12344 114131;114132;114133;114134;114135;114136;114137;114138;114139;114140;114141;114142;114143;114144;114145;114146;114147;114148;114149;114150;114151 91202;91203;91204;91205;91206;91207;91208;91209;91210;91211;91212;91213;91214;91215 91206 13 ENPLQFK Unmodified 874.45487 0.45486751 1017;1345 P35241;P15311 RDX;EZR Radixin;Ezrin no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 47.767 46.369 2 0.017342 62092 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.87 47.638 3279700000 5005400 2776000000 85543000 28721000 9775600 14847000 16917000 18480000 11199000 18028000 53490000 49724000 15458000 44502000 132000000 13573 1345;1017 12345 114152;114153;114154;114155;114156;114157;114158;114159;114160;114161;114162;114163;114164;114165;114166;114167;114168 91216;91217;91218;91219;91220;91221;91222;91223;91224 91219 9 ENPPMKPDFSQLQR Unmodified 1685.8195 0.8195398 4676 Q9NVP2 ASF1B Histone chaperone ASF1B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.009 60.114 3 0.00027042 67863 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.328 46.512 98387000 0 0 0 5045000 3958500 10738000 6246400 7689000 4859400 9246400 10315000 10838000 5573900 6506500 17370000 13574 4676 12346 114169;114170;114171;114172;114173;114174;114175;114176;114177;114178;114179;114180 91225;91226;91227;91228;91229;91230;91231;91232;91233;91234;91235 91227 11 ENPPVKPDFSK Unmodified 1256.6401 0.6401021 5091 Q9Y294 ASF1A Histone chaperone ASF1A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 35.931 35.908 3 0.0055023 39737 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 42.789 35.06 41945000 0 0 0 8562600 6212900 8650200 5651100 0 0 0 0 0 0 0 12868000 13575 5091 12347 114181;114182;114183;114184;114185 91236;91237;91238;91239 91237 4 ENPRNFSDNQLQEGK Unmodified 1774.8234 0.8234392 1391 P37802 TAGLN2 Transgelin-2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.45 3.89 8 2 12 2 5 3 1 1 1 1 1 1 1 1 1 1 1 1 34.378 32.351 2;3 1.4957E-130 40841 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 231.36 206.67 3832900000 408160000 2004900000 1177500000 13554000 7601100 8086900 16623000 13245000 11408000 15518000 49324000 29465000 13528000 12094000 51889000 13576 1391 12348 114186;114187;114188;114189;114190;114191;114192;114193;114194;114195;114196;114197;114198;114199;114200;114201;114202;114203;114204;114205;114206;114207 91240;91241;91242;91243;91244;91245;91246;91247;91248;91249;91250;91251;91252;91253;91254;91255;91256;91257;91258;91259;91260;91261;91262;91263 91257 23 ENPSATLEDLEK Unmodified 1344.6409 0.64088996 3683 Q92900 UPF1 Regulator of nonsense transcripts 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 61.496 61.561 2 0.0079638 70176 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 49.5 31.636 91577000 0 0 0 3804400 2917800 10243000 5156400 7159700 7365900 8128100 7429500 0 6008400 9381000 23983000 13577 3683 12349 114208;114209;114210;114211;114212;114213;114214;114215;114216;114217;114218 91264;91265;91266;91267;91268;91269;91270;91271;91272;91273;91274 91266 11 ENPSSQYWK Unmodified 1137.5091 0.50908792 509 O75496 GMNN Geminin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 35.991 36.186 2 0.0037345 39286 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 101.33 85.446 85830000 0 0 0 8956100 0 8315200 7667600 7668400 6583000 0 0 22047000 0 0 24593000 13578 509 12350 114219;114220;114221;114222;114223;114224;114225 91275;91276;91277;91278;91279;91280;91281;91282 91280 8 ENPSTVGVER Unmodified 1086.5306 0.53055165 5068 Q9UQ84 EXO1 Exonuclease 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.054 21.261 2 0.0023779 22136 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 84.213 29.663 183480000 0 0 0 10316000 10889000 14483000 13287000 10861000 10399000 11691000 22670000 27252000 19918000 15751000 15957000 13579 5068 12351 114226;114227;114228;114229;114230;114231;114232;114233;114234;114235;114236;114237 91283;91284;91285;91286;91287;91288;91289;91290;91291;91292;91293;91294 91293 12 ENPSTVGVERVISTK Unmodified 1614.8577 0.85769944 5068 Q9UQ84 EXO1 Exonuclease 1 yes yes 0 0 1 By MS/MS 2 0 1 1 57.466 53.64 3 0.0084985 66977 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 45.434 24.771 4459300 0 0 4459300 0 0 0 0 0 0 0 0 0 0 0 0 13580 5068 12352 114238 91295;91296 91295 2 ENPVGTFHCSMSPGNLEK Unmodified 2002.8877 0.88769572 1479 P43378 PTPN9 Tyrosine-protein phosphatase non-receptor type 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 6 4 2 2 1 1 1 1 48.081 45.499 3;4 0.0035221 69546 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.852 28.012 41052000 18690000 10499000 0 0 0 0 0 0 0 0 0 0 0 4646800 7215600 13581 1479 12353 114239;114240;114241;114242 91297;91298;91299;91300 91299 3 ENPVLDVVSNPEQTAGEERGDGNSGFNEHLK Unmodified 3337.5447 0.54470475 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 77.485 73.991 4 9.2983E-58 94639 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.75 98.75 70177000 27093000 0 28373000 0 0 0 0 0 0 0 0 0 0 0 14712000 13582 2203 12354 114243;114244;114245 91301;91302;91303 91302 2 ENPVYEK Unmodified 877.41815 0.41814765 1508 P46777 RPL5 60S ribosomal protein L5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 14.653 14.718 2 0.049251 14494 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 64.236 32.947 138260000 0 0 0 16822000 19353000 21458000 0 0 20785000 29701000 0 30144000 0 0 0 13583 1508 12355 114246;114247;114248;114249;114250;114251 91304 91304 1 ENPYGEDDNK Unmodified 1179.468 0.46801097 3996 Q96SY0 VWA9 von Willebrand factor A domain-containing protein 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 10.233 10.344 2 0.01862 8332 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.283 44.349 11443000 0 0 0 591340 551390 1194800 882340 650210 945660 0 0 1878700 1545900 1391300 1811300 13584 3996 12356 114252;114253;114254;114255;114256;114257;114258;114259;114260;114261 91305;91306;91307 91305 3 ENPYYDSR Unmodified 1042.4356 0.43558863 2040 Q00610 CLTC Clathrin heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 20.58 20.791 2 0.033014 21120 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 53.968 43.095 153120000 0 0 0 9176600 7819000 15864000 0 9999700 5440000 16825000 22352000 21757000 0 15489000 28402000 13585 2040 12357 114262;114263;114264;114265;114266;114267;114268;114269;114270;114271 91308;91309;91310;91311;91312;91313;91314 91313 7 ENQEGAANVNVR Unmodified 1299.6167 0.61674089 3301 Q8N0X7 SPG20 Spartin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.069 21.275 2 1.0889E-05 20971 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 125.56 82.536 197070000 0 0 0 13475000 10098000 13746000 17768000 9770900 12039000 12186000 18020000 32738000 16510000 16656000 24059000 13586 3301 12358 114272;114273;114274;114275;114276;114277;114278;114279;114280;114281;114282;114283 91315;91316;91317;91318;91319;91320;91321;91322;91323;91324;91325;91326 91318 12 ENQEGAANVNVRGEK Unmodified 1613.7758 0.77576073 3301 Q8N0X7 SPG20 Spartin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 17.666 17.854 3 5.3916E-06 18090 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 81.632 67.886 143510000 0 0 0 9266800 9862700 11011000 8368300 10715000 8130900 10591000 9697700 27908000 16189000 13019000 8751100 13587 3301 12359 114284;114285;114286;114287;114288;114289;114290;114291;114292;114293;114294;114295 91327;91328;91329;91330;91331;91332;91333;91334;91335;91336;91337;91338 91329 11 ENQELNAHNQELNNR Unmodified 1821.8354 0.83540087 2990 Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching 10 0 7 1 1 1 1 1 1 1 23.198 23.365 3 0.0023305 24827 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 57.328 47.797 21109000 0 0 0 2442200 2449900 2480000 0 3118600 0 0 3345300 0 2942900 0 4329800 13588 2990 12360 114296;114297;114298;114299;114300;114301;114302 91339;91340 91340 2 ENQEPLRSPEVGDEEALRPLTK Unmodified 2506.2663 0.26634504 1549 P48681 NES Nestin yes yes 0 0 2 By MS/MS 2 0 1 1 69.58 65.9 4 0.036924 81481 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 20.426 12.893 3198800 0 0 3198800 0 0 0 0 0 0 0 0 0 0 0 0 13589 1549 12361 114303 91341 91341 1 ENQGDETQGQQPPQR Unmodified 1710.7558 0.75575357 1955 P67809 YBX1 Nuclease-sensitive element-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 1 2 2 2 2 2 11.243 11.387 2;3 3.1286E-28 9955 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 141.88 138.12 452080000 0 0 0 35997000 23213000 30538000 18556000 27412000 24497000 21199000 22178000 66820000 76879000 47315000 57473000 13590 1955 12362 114304;114305;114306;114307;114308;114309;114310;114311;114312;114313;114314;114315;114316;114317;114318;114319;114320;114321;114322;114323;114324;114325;114326 91342;91343;91344;91345;91346;91347;91348;91349;91350;91351;91352;91353;91354;91355;91356;91357;91358;91359;91360;91361 91357 14 ENQGDETQGQQPPQRR Unmodified 1866.8569 0.8568646 1955 P67809 YBX1 Nuclease-sensitive element-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 1 2 2 2 2 2 2 2 2 2 8.064 8.1979 2;3 1.339E-113 5871 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 200.13 156.94 7333100000 0 0 0 309830000 303750000 12501000 185860000 278740000 392190000 435050000 1958600000 1452800000 741090000 578740000 684010000 13591 1955 12363 114327;114328;114329;114330;114331;114332;114333;114334;114335;114336;114337;114338;114339;114340;114341;114342;114343;114344;114345;114346;114347;114348;114349 91362;91363;91364;91365;91366;91367;91368;91369;91370;91371;91372;91373;91374 91362 12 ENQINSFGK Unmodified 1035.4985 0.49852324 2227 Q13043 STK4 Serine/threonine-protein kinase 4;Serine/threonine-protein kinase 4 37kDa subunit;Serine/threonine-protein kinase 4 18kDa subunit yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 30.129 25.734 2 0.036336 33448 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.969 24.163 36809000 0 36809000 0 0 0 0 0 0 0 0 0 0 0 0 0 13592 2227 12364 114350;114351 91375 91375 1 ENQIPEEAGSSGLGK Unmodified 1514.7213 0.72126554 2468 Q15004 KIAA0101 PCNA-associated factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.31 2.4 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 46.084 46.317 2 4.0925E-14 45557 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 117.23 110.7 354420000 0 20905000 0 23448000 23344000 24320000 20853000 21028000 16913000 30877000 38050000 38414000 28074000 19315000 48879000 13593 2468 12365 114352;114353;114354;114355;114356;114357;114358;114359;114360;114361;114362;114363;114364 91376;91377;91378;91379;91380;91381;91382;91383;91384;91385;91386;91387;91388;91389;91390 91377 15 ENQIYSADEK Unmodified 1195.5357 0.5356966 3346 Q8N5F7;Q5M9Q1 NKAP;NKAPL NF-kappa-B-activating protein;NKAP-like protein yes no 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 21.414 21.666 2 0.0081592 22821 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 60.717 44.835 28043000 0 0 0 0 2474100 6630000 0 0 0 0 5140700 0 3978500 4648900 5170600 13594 3346 12366 114365;114366;114367;114368;114369;114370 91391;91392 91391 2 ENQLQLSCFINQEVK Unmodified 1848.904 0.90399771 1741 P54578 USP14 Ubiquitin carboxyl-terminal hydrolase 14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 5.25 3.7 3 2 3 1 3 1 1 1 1 85.703 83.815 2;3 1.7573E-102 103795 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 260.81 244.28 676700000 0 653430000 4053900 0 0 0 0 0 0 6288400 4174700 0 0 0 8749900 13595 1741 12367 114371;114372;114373;114374;114375;114376;114377;114378 91393;91394;91395;91396;91397;91398 91393 5 ENQPENSQTPTK Unmodified 1371.6266 0.62663688 2196 Q12834 CDC20 Cell division cycle protein 20 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.609 7.7363 2 0.00015498 6305 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 102.06 92.15 42658000 0 0 0 1322000 1635900 2524500 2192900 2857800 2895300 3288700 9382300 4293100 3586200 2940200 5738700 13596 2196 12368 114379;114380;114381;114382;114383;114384;114385;114386;114387;114388;114389;114390 91399;91400;91401;91402;91403;91404;91405;91406 91406 8 ENQQATSGPNQPSVR Unmodified 1611.7601 0.76011066 1044 P16989 YBX3 Y-box-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 2 1 1 2 2 2 1 1 2 2 1 18.786 18.965 2;3 1.7204E-49 19533 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 214.04 197.02 1129200000 0 0 0 30556000 115050000 31266000 29048000 88885000 120230000 198170000 30292000 49680000 162750000 114870000 158380000 13597 1044 12369 114391;114392;114393;114394;114395;114396;114397;114398;114399;114400;114401;114402;114403;114404;114405;114406;114407;114408 91407;91408;91409;91410;91411;91412;91413;91414;91415;91416;91417;91418;91419;91420;91421;91422;91423 91409 11 ENQQATSGPNQPSVRR Unmodified 1767.8612 0.86122169 1044 P16989 YBX3 Y-box-binding protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.537 14.728 3 6.4618E-12 14007 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 97.797 85.512 114690000 0 0 0 0 9419400 7037700 6189600 6659800 9047400 10673000 12271000 16269000 11242000 8549500 17329000 13598 1044 12370 114409;114410;114411;114412;114413;114414;114415;114416;114417;114418;114419;114420 91424;91425;91426;91427;91428;91429;91430;91431;91432;91433;91434;91435 91425 12 ENQTAVDVFR Unmodified 1177.5728 0.57275081 2524 Q15382 RHEB GTP-binding protein Rheb yes yes 0 0 0 By MS/MS 10 0 2 2 50.444 51.139 2 0.033857 56875 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.916 24.023 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13599 2524 12371 114421;114422 91436;91437 91436 2 ENQTAVDVFRR Unmodified 1333.6739 0.67386184 2524 Q15382 RHEB GTP-binding protein Rheb yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 2 1 1 1 1 1 2 1 1 2 1 2 43.886 44.061 2;3 0.00012162 48123 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.363 65.317 456630000 0 0 0 45823000 21234000 43775000 34174000 25212000 25407000 39990000 31527000 35258000 41294000 21144000 91794000 13600 2524 12372 114423;114424;114425;114426;114427;114428;114429;114430;114431;114432;114433;114434;114435;114436;114437;114438 91438;91439;91440;91441;91442;91443;91444;91445;91446;91447 91441 10 ENQVLSVR Unmodified 943.50869 0.50869399 2181 Q10589 BST2 Bone marrow stromal antigen 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.098 32.285 2 0.0068621 35620 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 93.429 54.622 221190000 0 0 0 12685000 14510000 14636000 16665000 14300000 13181000 20896000 22429000 35602000 20305000 16844000 19134000 13601 2181 12373 114439;114440;114441;114442;114443;114444;114445;114446;114447;114448;114449;114450 91448;91449;91450;91451;91452 91448 3 ENQWCEEK Unmodified 1121.4448 0.44477311 1946 P63208 SKP1 S-phase kinase-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 19.309 18.787 2 0.011883 19258 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 119.17 104.4 802470000 15969000 519240000 0 13241000 11980000 17159000 18588000 12840000 19506000 33047000 0 31265000 22127000 26980000 60526000 13602 1946 12374 114451;114452;114453;114454;114455;114456;114457;114458;114459;114460;114461;114462;114463 91453;91454;91455;91456;91457;91458;91459;91460;91461;91462 91458 8 ENQWFDVGVIK Unmodified 1333.6667 0.6666512 1663 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 84.281 83.164 2 6.7931E-05 103619 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.22 73.174 437190000 10892000 58467000 2863000 5458100 8334800 24717000 11708000 21231000 30258000 41710000 34331000 44077000 28050000 27194000 87898000 13603 1663 12375 114464;114465;114466;114467;114468;114469;114470;114471;114472;114473;114474;114475;114476;114477;114478;114479 91463;91464;91465;91466;91467;91468;91469;91470;91471;91472;91473;91474;91475 91466 13 ENRDIEISTEEEK Unmodified 1590.7373 0.73730954 2684 Q4G0J3 LARP7 La-related protein 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 2 1 6 3 1 1 1 1 1 1 31.524 30.569 2;3 4.1224E-08 31982 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.692 69.608 134730000 0 30049000 0 0 7436000 0 0 13945000 0 13010000 0 26917000 17655000 0 25722000 13604 2684 12376 114480;114481;114482;114483;114484;114485;114486;114487;114488 91476;91477;91478;91479;91480;91481;91482;91483 91479 7 ENRDLKDEIVR Unmodified 1385.7263 0.72629134 1029 P15924 DSP Desmoplakin yes yes 0 0 2 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 32.165 32.312 3 0.025408 35151 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 64.86 57.972 36224000 0 0 0 5151700 0 0 0 23409000 0 0 3303600 0 4359000 0 0 13605 1029 12377 114489;114490;114491;114492 91484 91484 1 ENRDQSAQCTASK Unmodified 1493.6529 0.6528684 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 1 By MS/MS 3 0 1 1 5.6343 2.273 2 7.5247E-13 3695 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 125.28 104.41 9577100 0 9577100 0 0 0 0 0 0 0 0 0 0 0 0 0 13606 3119 12378 114493 91485 91485 1 ENREAQMAAK Unmodified 1146.5452 0.54515585 1043 P16949 STMN1 Stathmin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 6.9 3.81 6 2 12 2 4 2 2 2 1 1 2 2 2 7.273 6.1119 2;3 6.5257E-05 7235 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.05 85.893 2971800000 213670000 2348100000 334490000 0 1490400 0 4340900 903590 0 0 8735400 11078000 0 14077000 34917000 13607 1043 12379 114494;114495;114496;114497;114498;114499;114500;114501;114502;114503;114504;114505;114506;114507;114508;114509;114510;114511;114512;114513 91486;91487;91488;91489;91490;91491;91492;91493 91486 5 ENRESLVVNYEDLAAR Unmodified 1876.9279 0.92790427 1590 P49736 MCM2 DNA replication licensing factor MCM2 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 71.541 71.9 3 0.00011007 82170 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.819 62.003 45065000 0 0 0 0 0 0 0 0 0 0 0 9434400 0 0 35631000 13608 1590 12380 114514;114515 91494;91495 91494 2 ENREVDRNEGLK Unmodified 1457.7223 0.7222686 4536 Q9NP72 RAB18 Ras-related protein Rab-18 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 9.887 10.018 3 0.0064489 8960 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 74.698 46.493 138250000 0 0 0 8702300 4522800 8260900 9941900 7543700 5047000 11615000 22863000 19109000 11655000 11950000 17040000 13609 4536 12381 114516;114517;114518;114519;114520;114521;114522;114523;114524;114525;114526;114527 91496;91497;91498;91499;91500 91497 5 ENRLCYYIGATDDAATK Unmodified 1959.8996 0.89964061 1758 P55145 MANF Mesencephalic astrocyte-derived neurotrophic factor yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 69.218 63.213 3 0.0086057 78336 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 51.225 45.515 20005000 8503300 0 11502000 0 0 0 0 0 0 0 0 0 0 0 0 13610 1758 12382 114528;114529 91501 91501 0 ENSAPLEENTTGK Unmodified 1388.642 0.64195259 1697 P52739 ZNF131 Zinc finger protein 131 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 22.364 22.528 2 0.00060699 23539 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 76.143 45.579 36080000 0 0 0 2243400 2226100 2445900 2052300 2065300 1447600 2459200 6612000 5413100 4826400 4289300 0 13611 1697 12383 114530;114531;114532;114533;114534;114535;114536;114537;114538;114539;114540 91502;91503 91502 2 ENSDQNHPDNQQLK Unmodified 1665.7343 0.73428984 4621 Q9NS87 KIF15 Kinesin-like protein KIF15 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 10.063 6.7495 3 0.010155 9534 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 41.621 30.833 24019000 0 24019000 0 0 0 0 0 0 0 0 0 0 0 0 0 13612 4621 12384 114541;114542 91504;91505 91504 2 ENSDVIALWK Unmodified 1173.603 0.60298831 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 80.571 77.239 2 0.015038 92629 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 79.906 50.757 3092100 0 3092100 0 0 0 0 0 0 0 0 0 0 0 0 0 13613 1286 12385 114543;114544 91506;91507 91507 2 ENSETVVTGSLDDLVK Unmodified 1704.8418 0.84177461 4304 Q9GZS3 WDR61 WD repeat-containing protein 61;WD repeat-containing protein 61, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80.723 79.747 2 3.0788E-31 99447 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 131.06 122.55 1740700000 53577000 1180900000 3457000 11746000 22755000 26663000 21642000 24694000 21343000 44364000 49498000 75226000 44269000 56413000 104120000 13614 4304 12386 114545;114546;114547;114548;114549;114550;114551;114552;114553;114554;114555;114556;114557;114558;114559 91508;91509;91510;91511;91512;91513;91514;91515;91516;91517;91518;91519;91520;91521;91522;91523 91514 16 ENSEYGVAPEWGDVVK Unmodified 1777.8159 0.81589421 2670 Q3L8U1 CHD9 Chromodomain-helicase-DNA-binding protein 9 yes yes 0 0 0 By MS/MS 10 0 1 1 76.884 76.97 2 0.021897 89237 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 31.228 15.962 1984300 0 0 0 0 0 0 0 0 0 0 0 0 1984300 0 0 13615 2670 12387 114560 91524 91524 1 ENSGAIEASVK Unmodified 1103.5459 0.54586736 2863 Q69YN4 KIAA1429 Protein virilizer homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.846 25.068 2 0.00055755 26834 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 81.338 32.543 54142000 0 0 0 7083100 3695800 0 5108300 4747700 2721500 4018100 4948300 6802000 5451600 4120900 5444900 13616 2863 12388 114561;114562;114563;114564;114565;114566;114567;114568;114569;114570;114571;114572 91525;91526;91527;91528;91529;91530;91531;91532;91533;91534;91535;91536 91527 12 ENSHPAPQQPSQPVK Unmodified 1642.8063 0.80633258 3075 Q7Z2Z1 TICRR Treslin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 18.391 18.462 3 0.034381 18910 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 27.734 16.043 10117000 0 0 0 2069000 0 0 2393400 0 0 3438600 0 0 0 2215900 0 13617 3075 12389 114573;114574;114575;114576 91537 91537 1 ENSIEILSSTIK Unmodified 1332.7137 0.71366097 4703 Q9NWV4 C1orf123 UPF0587 protein C1orf123 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 78.33 78.508 2 2.621E-05 90286 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.616 79.95 22732000 0 0 0 0 0 0 0 0 0 0 0 4411100 0 2908400 15413000 13618 4703 12390 114577;114578;114579 91538;91539 91538 1 ENSLCGSAPNSR Unmodified 1290.5623 0.56226248 2653 Q2NKX8 ERCC6L DNA excision repair protein ERCC-6-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 17.94 18.134 2 0.00050512 17239 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.655 67.504 14559000 0 0 0 0 1299600 1884500 1529600 0 1142200 0 0 2652500 1632900 2253100 2164900 13619 2653 12391 114580;114581;114582;114583;114584;114585;114586;114587;114588 91540;91541;91542;91543;91544;91545;91546;91547 91542 8 ENSLEAIRSK Unmodified 1145.6041 0.60405094 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 1 2 30.898 26.739 2;3 0.005699 34093 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 101.65 65.251 65110000 6385300 5268600 53456000 0 0 0 0 0 0 0 0 0 0 0 0 13620 1286 12392 114589;114590;114591;114592 91548;91549;91550 91550 2 ENSLLYSEIPK Unmodified 1291.666 0.66598249 3136 Q86TI2 DPP9 Dipeptidyl peptidase 9 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 71.81 72.138 2 0.030007 82388 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.804 11.068 9189700 0 0 0 0 0 0 0 0 0 0 3836300 0 0 0 5353400 13621 3136 12393 114593;114594 91551 91551 1 ENSQLDEENLELRR Unmodified 1743.8388 0.83875492 2676 Q3V6T2 CCDC88A Girdin yes yes 0 0 1 By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 48.237 48.392 3 0.00056262 54207 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 51.546 43.37 95214000 0 0 0 9350000 5185400 10872000 7298300 0 5232400 10854000 8569100 13393000 12969000 0 11491000 13622 2676 12394 114595;114596;114597;114598;114599;114600;114601;114602;114603;114604 91552;91553;91554 91554 3 ENSREALAEAALESPRPALVR Unmodified 2278.203 0.20295692 209 O14745 SLC9A3R1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 yes yes 0 0 2 By MS/MS 10 0 1 1 72.472 72.842 4 0.00034399 83368 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.363 36.869 18481000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18481000 13623 209 12395 114605 91555 91555 1 ENSRPDSSLPETSK Unmodified 1545.7271 0.7270792 2287 Q13426 XRCC4 DNA repair protein XRCC4 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 24.131 20.086 3 0.0088274 26524 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 47.545 28.222 23528000 0 23528000 0 0 0 0 0 0 0 0 0 0 0 0 0 13624 2287 12396 114606;114607 91556 91556 1 ENSSCGRFDITIGPK Unmodified 1679.7937 0.79371898 5117 Q9Y2T2 AP3M1 AP-3 complex subunit mu-1 yes yes 0 0 1 By MS/MS 2 0 1 1 70.249 61.964 3 0.024778 82653 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 35.303 24.669 4832000 4832000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13625 5117 12397 114608 91557 91557 1 ENSSEVVQPFLMGCGTK Unmodified 1881.8601 0.86008398 3087 Q7Z3U7 MON2 Protein MON2 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 81.607 76.902 2 6.7911E-95 95662 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 242.79 212.58 77434000 0 77434000 0 0 0 0 0 0 0 0 0 0 0 0 0 13626 3087 12398 114609 91558 91558 1 ENSSGSSPLDQVDSSLPSEPIFEK Unmodified 2548.1817 0.18167194 301 O43164 PJA2 E3 ubiquitin-protein ligase Praja-2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 88.275 84.231 3 4.3417E-16 104497 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 59.005 55.054 71324000 0 71324000 0 0 0 0 0 0 0 0 0 0 0 0 0 13627 301 12399 114610;114611 91559;91560;91561;91562 91559 4 ENSSPSVTSANLDHTK Unmodified 1685.7857 0.78565671 555 O75909 CCNK Cyclin-K yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 29.524 28.817 3 6.9685E-06 37090 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.58 89.067 173770000 0 101430000 0 0 0 8219900 0 0 6504800 0 10384000 10386000 12067000 9491700 15281000 13628 555 12400 114612;114613;114614;114615;114616;114617;114618;114619;114620;114621 91563;91564;91565;91566;91567;91568;91569;91570;91571 91565 8 ENSSQIAQDHQK Unmodified 1383.6379 0.63787026 4926 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 8.3475 5.0445 3 0.011198 7376 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 38.584 28.231 13157000 0 13157000 0 0 0 0 0 0 0 0 0 0 0 0 0 13629 4926 12401 114622;114623 91572 91572 1 ENSTLDVECHEK Unmodified 1459.6249 0.62492232 2977 Q6UVJ0 SASS6 Spindle assembly abnormal protein 6 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 22.283 22.447 3 0.02809 23463 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 33.968 26.8 130720000 0 0 0 6772600 7196500 8423500 8420700 14901000 9595400 11343000 9826400 19744000 19172000 15321000 0 13630 2977 12402 114624;114625;114626;114627;114628;114629;114630;114631;114632;114633;114634 91573;91574;91575;91576;91577 91576 5 ENTAAENGLTVR Unmodified 1273.6262 0.62624295 2189 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.436 31.622 2 3.0672E-08 33186 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 130.41 91.108 198370000 0 0 0 12402000 12651000 19176000 13392000 9660300 11474000 18148000 19732000 20031000 18273000 18509000 24924000 13631 2189 12403 114635;114636;114637;114638;114639;114640;114641;114642;114643;114644;114645;114646 91578;91579;91580;91581;91582;91583;91584;91585;91586 91580 9 ENTEERLFK Unmodified 1164.5775 0.57750184 1344 P35237 SERPINB6 Serpin B6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 6 2 2 4 2 38.601 33.677 2;3 2.137E-31 41855 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 224.36 119.92 1467600000 273850000 586400000 607310000 0 0 0 0 0 0 0 0 0 0 0 0 13632 1344 12404 114647;114648;114649;114650;114651;114652;114653;114654 91587;91588;91589;91590;91591 91588 3 ENTEQRAEEIESR Unmodified 1589.7281 0.72814183 2239 Q13136 PPFIA1 Liprin-alpha-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 25.051 25.308 3 0.00068851 27118 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 65.805 48.316 82393000 0 0 0 0 0 10325000 8750400 0 8971200 13449000 17766000 9557700 0 13574000 0 13633 2239 12405 114655;114656;114657;114658;114659;114660;114661;114662 91592;91593;91594;91595;91596;91597;91598;91599;91600;91601;91602;91603 91593 11 ENTFLQEQLVELK Unmodified 1589.8301 0.83008771 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 84.545 83.866 2 3.3924E-13 104101 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.69 104.42 106780000 0 63076000 0 0 0 0 3447600 4259200 5549700 6663400 3598300 6475600 3398200 0 10314000 13634 2291 12406 114663;114664;114665;114666;114667;114668;114669;114670;114671;114672;114673;114674 91604;91605;91606;91607;91608;91609;91610;91611;91612;91613 91606 10 ENTFTIENESVK Unmodified 1409.6674 0.66743906 2882 Q6IA86 ELP2 Elongator complex protein 2 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 56.842 50.544 2 0.0021888 68276 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 100.48 67.664 160690000 7823400 152860000 0 0 0 0 0 0 0 0 0 0 0 0 0 13635 2882 12407 114675;114676;114677 91614;91615;91616 91616 3 ENTNHDDSSRDSYSSDR Unmodified 1983.7791 0.77906779 199 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 yes yes 0 0 1 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 6.5535 6.6747 3 0.0069804 4789 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 34.909 29.908 17123000 0 0 0 978320 807000 1509200 997420 0 1128300 1759700 1409800 2670800 1576900 2096300 2189700 13636 199 12408 114678;114679;114680;114681;114682;114683;114684;114685;114686;114687;114688 91617 91617 1 ENTPPALSGTR Unmodified 1141.5728 0.57275081 1301 P31350 RRM2 Ribonucleoside-diphosphate reductase subunit M2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.36 29.552 2 0.00036041 30756 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.048 65.208 346770000 0 0 0 16151000 12684000 17476000 23282000 15923000 20074000 27736000 37904000 38332000 31943000 33012000 72252000 13637 1301 12409 114689;114690;114691;114692;114693;114694;114695;114696;114697;114698;114699;114700 91618;91619;91620;91621;91622;91623;91624;91625;91626;91627;91628;91629 91621 11 ENTPPALSGTRVLASK Unmodified 1639.8893 0.88933392 1301 P31350 RRM2 Ribonucleoside-diphosphate reductase subunit M2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 60.621 54.631 3 1.4561E-07 73689 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.98 84.496 83328000 54958000 19915000 8455400 0 0 0 0 0 0 0 0 0 0 0 0 13638 1301 12410 114701;114702;114703 91630;91631;91632;91633;91634;91635;91636 91634 7 ENTPSEANLQEEEVR Unmodified 1743.7911 0.79113602 3707 Q93062 RBPMS RNA-binding protein with multiple splicing yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 43.295 43.473 2 6.697E-27 47613 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 133.32 94.539 153630000 0 0 0 11285000 9516500 9327300 14117000 10717000 0 13261000 17268000 19939000 11441000 11782000 24979000 13639 3707 12411 114704;114705;114706;114707;114708;114709;114710;114711;114712;114713;114714 91637;91638;91639;91640;91641;91642;91643;91644;91645;91646;91647 91643 11 ENTQPFVVLPK Unmodified 1270.6921 0.69213767 4275 Q9BZQ8 FAM129A Protein Niban yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 77.586 73.837 2 0.023452 92080 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 56.916 38.136 213790000 0 212560000 1228900 0 0 0 0 0 0 0 0 0 0 0 0 13640 4275 12412 114715;114716 91648 91648 1 ENTQTTIK Unmodified 933.47673 0.47672516 1868 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 7.5927 7.694 2 0.019504 5742 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 63.565 15.717 25541000 0 0 0 1474400 1655800 5812300 3434300 3426400 0 1960200 3318900 0 1764200 0 2694500 13641 1868 12413 114717;114718;114719;114720;114721;114722;114723;114724;114725 91649 91649 1 ENTSVLQQNPSLSGSR Unmodified 1715.8438 0.84384029 3121 Q7Z7C8 TAF8 Transcription initiation factor TFIID subunit 8 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 47.616 47.687 2 0.00030694 53571 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 85.845 70.579 33678000 0 0 0 2231400 2767400 4574400 2809700 3183100 2909500 5145000 4435900 0 0 0 5621400 13642 3121 12414 114726;114727;114728;114729;114730;114731;114732;114733;114734 91650;91651;91652;91653;91654;91655;91656 91654 6 ENVATTDTLESTTVGTSV Unmodified 1823.8636 0.86363226 2485 Q15046 KARS Lysine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.31 2.4 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 73.403 73.877 2 9.3044E-10 87259 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 102.4 88.738 114790000 21027000 0 0 1930400 3628000 8691900 5858700 3059400 3895600 6200700 11892000 12893000 6497800 8482100 20734000 13643 2485 12415 114735;114736;114737;114738;114739;114740;114741;114742;114743;114744;114745;114746;114747 91657;91658;91659;91660;91661;91662 91658 6 ENVCLLPDESIQK Unmodified 1543.7552 0.75520821 4237 Q9BY12 SCAPER S phase cyclin A-associated protein in the endoplasmic reticulum yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 52.712 47.369 2 0.028604 61102 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 61.161 19.762 23099000 0 23099000 0 0 0 0 0 0 0 0 0 0 0 0 0 13644 4237 12416 114748;114749 91663 91663 1 ENVEGHDLPASEK Unmodified 1423.6579 0.657937 3817 Q96EN8 MOCOS Molybdenum cofactor sulfurase yes yes 0 0 0 By matching By MS/MS 2.4 0.49 3 2 1 4 30.01 25.35 2;3 8.0753E-34 33284 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 195.77 156.99 127400000 5219700 122180000 0 0 0 0 0 0 0 0 0 0 0 0 0 13645 3817 12417 114750;114751;114752;114753;114754 91664;91665;91666 91665 2 ENVENWQSSK Unmodified 1219.5469 0.54692999 602 O94913 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 26.68 27.143 2 0.012071 28078 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.124 39.005 15659000 0 0 0 0 0 0 0 0 0 3115100 0 5101900 0 3452700 3989200 13646 602 12418 114755;114756;114757;114758;114759 91667;91668 91667 2 ENVEQCHNDTK Unmodified 1372.5677 0.56774179 2776 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 6.2583 2.9575 3 0.010104 4412 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 51.841 42.734 37583000 0 37583000 0 0 0 0 0 0 0 0 0 0 0 0 0 13647 2776 12419 114760;114761 91669;91670 91670 2 ENVLFLTSGTRR Unmodified 1391.7521 0.75211216 2398 Q14244 MAP7 Ensconsin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.582 61.682 3 8.5272E-09 70336 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 113.77 96.825 115480000 0 0 0 7031400 4965400 8178200 7307600 6266000 7610300 11458000 11096000 15457000 7854400 9588600 18672000 13648 2398 12420 114762;114763;114764;114765;114766;114767;114768;114769;114770;114771;114772;114773 91671;91672;91673;91674;91675;91676;91677;91678;91679;91680;91681;91682;91683 91677 13 ENVLIGDGAGFK Unmodified 1218.6245 0.62445203 944 P11310 ACADM Medium-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 66.32 64.885 2 0.00026786 82660 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.93 73.925 329150000 12920000 267960000 5074700 2580500 2003500 2571100 2752700 0 0 4443900 6649800 5740900 0 3571100 12880000 13649 944 12421 114774;114775;114776;114777;114778;114779;114780;114781;114782;114783;114784;114785;114786 91684;91685;91686;91687;91688;91689;91690;91691;91692 91687 9 ENVLITGGGR Unmodified 1014.5458 0.54580778 556 O75911 DHRS3 Short-chain dehydrogenase/reductase 3 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 36.524 36.926 2 0.011537 40272 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 54.066 24.323 25202000 0 0 0 0 0 0 10766000 0 0 0 0 14436000 0 0 0 13650 556 12422 114787;114788 91693;91694 91694 2 ENVLQYCRK Unmodified 1208.5972 0.59719142 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 29.783 29.923 3 0.020635 31973 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 32.32 21.491 27630000 0 0 0 2811400 1694500 2755900 0 3068500 0 3618500 3645800 4836100 5199600 0 0 13651 1492 12423 114789;114790;114791;114792;114793;114794;114795;114796 91695 91695 1 ENVMEDFLK Unmodified 1123.522 0.52196079 433 O60825 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 80.302 80.305 2 0.01612 92894 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 56.81 38.028 29709000 0 0 0 2333400 2889600 6330200 3429100 3193200 3466300 5852000 0 0 2215100 0 0 13652 433 12424 114797;114798;114799;114800;114801;114802;114803;114804 91696;91697 91696 2 ENVMEDFLK Oxidation (M) 1139.5169 0.51687542 433 O60825 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase yes yes 0 1 0 By MS/MS 10 0 1 1 55.185 54.661 2 0.030985 62496 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 61.962 39.831 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13653 433 12424 114805 91698 91698 1 ENVMLQSQK Unmodified 1075.5332 0.53319418 1322 P32519 ELF1 ETS-related transcription factor Elf-1 yes yes 0 0 0 By MS/MS 2 0 1 1 28.638 24.291 2 0.0066168 31989 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.06 67.662 9889000 0 9889000 0 0 0 0 0 0 0 0 0 0 0 0 0 13654 1322 12425 114806 91699 91699 1 ENVNATENCISAVGK Unmodified 1604.7464 0.74643444 149 O00410 IPO5 Importin-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.58 1 2 2 12 3 2 1 1 1 1 1 1 1 1 1 1 1 1 48.032 47.08 2 3.9706E-148 47849 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 213.77 207.48 750740000 151330000 59450000 0 30264000 20455000 66665000 23484000 21020000 24027000 39794000 61981000 55590000 46487000 60995000 89199000 13655 149 12426 114807;114808;114809;114810;114811;114812;114813;114814;114815;114816;114817;114818;114819;114820;114821;114822;114823 91700;91701;91702;91703;91704;91705;91706;91707;91708;91709;91710;91711;91712;91713;91714;91715 91711 16 ENVNLAQIR Unmodified 1055.5724 0.57235688 1538 P48444 ARCN1 Coatomer subunit delta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.761 48.919 2 0.0031541 55934 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 92.439 61.366 399580000 0 0 0 21730000 16374000 38018000 22051000 20994000 22380000 44512000 40454000 42464000 33383000 29801000 67419000 13656 1538 12427 114824;114825;114826;114827;114828;114829;114830;114831;114832;114833;114834;114835 91716;91717;91718;91719;91720;91721;91722;91723;91724;91725;91726;91727 91726 12 ENVNSLLPVFEEFLK Unmodified 1776.9298 0.92980175 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 3 1 102 97.311 2 2.1231E-15 120965 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145.81 138.08 136160000 16522000 116530000 3104900 0 0 0 0 0 0 0 0 0 0 0 0 13657 3641 12428 114836;114837;114838;114839;114840 91728;91729;91730;91731;91732 91728 4 ENVPPGPEVCITHQEGEK Unmodified 2018.9368 0.9367544 4893 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 54.57 49.222 3 3.0305E-06 61129 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 90.654 86.677 66504000 0 66504000 0 0 0 0 0 0 0 0 0 0 0 0 0 13658 4893 12429 114841;114842 91733;91734;91735;91736 91735 4 ENVSALDMEK Unmodified 1134.5227 0.52268908 4376 Q9H307 PNN Pinin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.603 41.781 2 0.0010088 46353 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 110.76 69.327 101980000 0 0 0 3939800 5143200 7998700 6044100 6876000 5887800 9151900 11905000 14086000 11372000 7397600 12179000 13659 4376 12430 114843;114844;114845;114846;114847;114848;114849;114850;114851;114852;114853;114854 91737;91738;91739;91740;91741;91742;91743;91744;91745;91746;91747;91748 91742 12 ENVSALDMEK Oxidation (M) 1150.5176 0.5176037 4376 Q9H307 PNN Pinin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 27.415 27.689 2 0.0072278 28663 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.064 30.141 22540000 0 0 0 5044500 0 0 0 0 0 0 0 0 6243300 3952300 7300300 13660 4376 12430 114855;114856;114857;114858;114859;114860 91749;91750;91751;91752;91753 91750 5832 5 ENVSNCIQLK Unmodified 1203.5918 0.59177169 4990 Q9ULC4 MCTS1 Malignant T-cell-amplified sequence 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 6.25 3.77 1 1 2 2 1 1 47.928 42.702 2 1.0779E-05 55318 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.75 94.465 557440000 0 557440000 0 0 0 0 0 0 0 0 0 0 0 0 0 13661 4990 12431 114861;114862;114863;114864 91754;91755;91756 91755 3 ENVTVLDK Unmodified 916.48656 0.48656157 3194 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 yes yes 0 0 0 By MS/MS 2 0 1 1 34.594 29.838 2 0.033827 39260 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.26 25.411 113970000 0 113970000 0 0 0 0 0 0 0 0 0 0 0 0 0 13662 3194 12432 114865 91757 91757 1 ENVVQSVTSVAEK Unmodified 1388.7147 0.7147236 574 O76070 SNCG Gamma-synuclein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.63 3.63 1 6 2 21 4 4 1 2 2 1 2 2 1 2 2 1 2 2 2 66.304 65.212 2;3 1.6292E-15 74386 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 169.58 169.58 9378200000 87350000 4964200000 1851800 213910000 271440000 197380000 331850000 242680000 209230000 293990000 476130000 580870000 289660000 396410000 821210000 13663 574 12433 114866;114867;114868;114869;114870;114871;114872;114873;114874;114875;114876;114877;114878;114879;114880;114881;114882;114883;114884;114885;114886;114887;114888;114889;114890;114891;114892;114893;114894;114895 91758;91759;91760;91761;91762;91763;91764;91765;91766;91767;91768;91769;91770;91771;91772;91773;91774;91775;91776;91777;91778;91779;91780;91781;91782;91783;91784;91785;91786;91787;91788 91784 26 ENWGPWSAGGSR Unmodified 1302.5741 0.5741478 2215 Q12965 MYO1E Unconventional myosin-Ie yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 62.203 62.372 2 0.0056965 71548 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 56.404 50.923 47614000 0 0 0 0 1855500 4088600 2660100 3580000 2508200 5752600 3976000 7562600 3462500 2990300 9178200 13664 2215 12434 114896;114897;114898;114899;114900;114901;114902;114903;114904;114905;114906 91789;91790;91791;91792;91793;91794;91795;91796 91795 8 ENYHYVTILMK Unmodified 1409.7013 0.70132214 4659 Q9NV35 NUDT15 Probable 8-oxo-dGTP diphosphatase NUDT15 yes yes 0 0 0 By MS/MS 2 0 1 1 79.454 71.324 3 0.03896 93681 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 29.341 15.083 9802400 9802400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13665 4659 12435 114907 91797 91797 1 ENYNQYDLNR Unmodified 1327.5793 0.57929275 998 P14384 CPM Carboxypeptidase M yes yes 0 0 0 By MS/MS By matching By matching By matching 10 0 4 1 1 1 1 37.558 37.556 2 0.0069602 42034 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 74.464 64.684 11008000 0 0 0 4795200 0 2437100 0 0 0 1777800 0 0 0 1998000 0 13666 998 12436 114908;114909;114910;114911 91798 91798 1 EPAADAAPGPSAAFR Unmodified 1426.6841 0.68409218 4973 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.542 48.702 2 5.7809E-08 54677 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 91.043 75.892 219920000 0 0 0 13693000 11690000 23586000 9598900 9676300 11853000 19207000 24514000 25744000 18278000 21018000 31063000 13667 4973 12437 114912;114913;114914;114915;114916;114917;114918;114919;114920;114921;114922;114923 91799;91800;91801;91802;91803;91804;91805;91806;91807;91808;91809;91810;91811;91812;91813 91804 15 EPAAMDQESGK Unmodified 1161.4972 0.49720261 301 O43164 PJA2 E3 ubiquitin-protein ligase Praja-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 12.866 13.179 2 0.016481 11830 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.318 27.078 5665100 0 0 0 0 0 906550 0 0 0 0 1659700 1505700 0 0 1593200 13668 301 12438 114924;114925;114926;114927 91814;91815 91815 2 EPAAPVSIQR Unmodified 1066.5771 0.57710791 2452 Q14847 LASP1 LIM and SH3 domain protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.56 3 2 1 13 1 2 1 1 1 1 1 1 1 1 1 1 1 2 40.868 40 2 0.00090518 43764 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 115.7 106.52 1403200000 48269000 835690000 0 11719000 12566000 15468000 15949000 14337000 11832000 14464000 92443000 95590000 16423000 76045000 142370000 13669 2452 12439 114928;114929;114930;114931;114932;114933;114934;114935;114936;114937;114938;114939;114940;114941;114942;114943 91816;91817;91818;91819;91820;91821;91822;91823;91824;91825;91826;91827;91828;91829;91830 91826 14 EPAAPVSIQRSAPGGGGK Unmodified 1677.8798 0.87983187 2452 Q14847 LASP1 LIM and SH3 domain protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 4 2 2 43.797 38.467 2;3 7.7712E-09 52850 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 106.32 97.135 136610000 66969000 0 69642000 0 0 0 0 0 0 0 0 0 0 0 0 13670 2452 12440 114944;114945;114946;114947 91831;91832;91833 91832 3 EPAASAAAFPSQR Unmodified 1301.6364 0.6364137 5127 Q9Y2X9 ZNF281 Zinc finger protein 281 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 40.104 40.151 2 0.0048564 44506 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 60.434 30.624 13309000 0 0 0 0 3861600 0 0 4181500 0 0 5266400 0 0 0 0 13671 5127 12441 114948;114949;114950;114951 91834;91835;91836;91837 91834 4 EPACDDPDTEQAALAAVDYINK Unmodified 2405.0693 0.069284717 71 CON__P12763 yes yes 0 0 0 By MS/MS 2 0 1 1 87.206 82.397 3 4.4808E-11 102471 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 52.769 50.378 + 20195000 0 20195000 0 0 0 0 0 0 0 0 0 0 0 0 0 13672 71 12442 114952 91838 91838 1 EPAFEDITLESER Unmodified 1534.7151 0.71511753 494 O75400 PRPF40A Pre-mRNA-processing factor 40 homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.065 75.124 2 3.7144E-11 86512 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 152.69 141.47 333320000 0 0 0 13038000 21681000 16963000 27606000 19790000 21848000 35952000 35054000 54060000 25646000 25244000 36435000 13673 494 12443 114953;114954;114955;114956;114957;114958;114959;114960;114961;114962;114963;114964 91839;91840;91841;91842;91843;91844;91845;91846;91847;91848 91841 6 EPAFEDITLESERK Unmodified 1662.8101 0.81008055 494 O75400 PRPF40A Pre-mRNA-processing factor 40 homolog A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.66 2.95 4 1 24 1 3 1 2 2 2 2 2 2 2 2 2 2 2 2 67.217 66.539 2;3 7.0635E-17 76033 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 124.51 119.34 1675300000 37172000 68780000 14477000 58110000 58453000 105300000 115170000 97020000 139400000 147430000 161460000 157030000 135840000 149840000 229800000 13674 494 12444 114965;114966;114967;114968;114969;114970;114971;114972;114973;114974;114975;114976;114977;114978;114979;114980;114981;114982;114983;114984;114985;114986;114987;114988;114989;114990;114991;114992;114993 91849;91850;91851;91852;91853;91854;91855;91856;91857;91858;91859;91860;91861;91862;91863;91864;91865;91866;91867;91868;91869;91870;91871;91872;91873;91874;91875;91876;91877;91878;91879;91880;91881;91882 91852 33 EPAHALAFQQK Unmodified 1238.6408 0.6407708 3823 Q96EV2 RBM33 RNA-binding protein 33 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching 7.14 3.83 5 9 2 1 2 1 1 1 1 1 1 1 1 1 34.736 33.099 2;3 3.4797E-12 46881 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 154.12 133.22 138620000 49013000 20458000 30091000 0 3391900 3681600 0 3381900 3676900 4167100 3753900 6505100 0 4230500 6271100 13675 3823 12445 114994;114995;114996;114997;114998;114999;115000;115001;115002;115003;115004;115005;115006;115007 91883;91884;91885;91886 91884 4 EPAITSQNSPEAR Unmodified 1398.6739 0.67392142 1149 P23193 TCEA1 Transcription elongation factor A protein 1 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 26.499 26.917 2 0.0074389 27887 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 113.44 97.112 17769000 0 0 0 0 0 0 0 0 0 2918700 0 0 0 0 14850000 13676 1149 12446 115008;115009 91887 91887 0 EPAITSQNSPEAREESTSSGNVSNRK Unmodified 2774.3067 0.30670631 1149 P23193 TCEA1 Transcription elongation factor A protein 1 yes yes 0 0 2 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 2 14 1 1 1 1 1 1 1 1 1 2 1 1 1 2 28.373 28.015 3;4 1.768E-33 29286 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.445 76.697 277100000 16408000 0 107270000 8893600 8060600 11301000 6413600 8653100 13748000 11885000 18079000 12629000 8709100 13011000 32047000 13677 1149 12447 115010;115011;115012;115013;115014;115015;115016;115017;115018;115019;115020;115021;115022;115023;115024;115025 91888;91889;91890;91891;91892;91893;91894;91895;91896;91897;91898;91899;91900 91890 13 EPALNEANLSNLK Unmodified 1411.7307 0.73070802 2127 Q06323 PSME1 Proteasome activator complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.79 1 4 1 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 68.341 67.118 2 4.0982E-33 82603 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 170.02 152.62 2960600000 90657000 2019800000 14243000 34880000 25972000 52963000 44791000 36844000 27578000 70376000 106180000 103490000 48631000 75179000 209020000 13678 2127 12448 115026;115027;115028;115029;115030;115031;115032;115033;115034;115035;115036;115037;115038;115039;115040;115041;115042;115043 91901;91902;91903;91904;91905;91906;91907;91908;91909;91910;91911;91912;91913;91914;91915;91916;91917;91918 91903 17 EPALPLEPDSGGNTSPGVTANGEAR Unmodified 2435.1565 0.15646024 3693 Q92974 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 1 2 2 2 2 2 2 2 2 70.997 71.068 2;3 4.5221E-06 82153 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 54.501 47.299 187070000 0 0 0 11379000 10587000 13124000 17554000 13593000 0 16659000 23675000 26936000 14841000 14070000 24650000 13679 3693 12449 115044;115045;115046;115047;115048;115049;115050;115051;115052;115053;115054;115055;115056;115057;115058;115059;115060;115061;115062;115063;115064 91919;91920;91921;91922;91923;91924;91925;91926;91927;91928;91929;91930 91927 11 EPALTAGR Unmodified 813.43447 0.43446642 3108 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.289 20.49 2 0.030437 19793 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 55.531 18.961 240320000 0 0 0 11897000 16478000 19224000 15659000 10903000 12933000 20209000 27518000 32408000 22887000 18101000 32107000 13680 3108 12450 115065;115066;115067;115068;115069;115070;115071;115072;115073;115074;115075;115076 91931 91931 1 EPAPETADGPYLVIVEQPK Unmodified 2052.0415 0.041537049 2042 Q00653 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 4 1 1 1 1 1 1 1 1 1 1 1 1 82.917 81.962 2;3 3.0296E-85 101079 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 173.06 150.59 282400000 0 161070000 0 3558000 5968000 11159000 7594300 8084600 7678800 15505000 14565000 14025000 7126900 6730800 19331000 13681 2042 12451 115077;115078;115079;115080;115081;115082;115083;115084;115085;115086;115087;115088;115089;115090;115091;115092 91932;91933;91934;91935;91936;91937;91938;91939;91940;91941;91942;91943;91944;91945;91946 91935 14 EPAPLPSRPQVPTPAPLLPDSK Unmodified 2306.2634 0.26343191 4028 Q99583 MNT Max-binding protein MNT yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.518 79.621 3 0.00011485 91738 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.768 39.606 111980000 0 0 0 0 10479000 7560900 6514500 7786200 7294300 9468400 7667100 13203000 7258400 12045000 22699000 13682 4028 12452 115093;115094;115095;115096;115097;115098;115099;115100;115101;115102;115103 91947;91948;91949;91950;91951;91952;91953;91954;91955;91956;91957 91950 11 EPAPQVSLNVK Unmodified 1180.6452 0.64518747 5190 Q9Y4B4 RAD54L2 Helicase ARIP4 yes yes 0 0 0 By MS/MS 2 0 1 1 58.164 52.333 2 0.012528 67484 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.556 48.813 10337000 0 10337000 0 0 0 0 0 0 0 0 0 0 0 0 0 13683 5190 12453 115104 91958;91959 91958 2 EPARECAQRIAEQQK Unmodified 1812.8901 0.89007898 2501 Q15149 PLEC Plectin yes yes 0 0 2 By MS/MS 2 0 1 1 29.873 24.252 3 0.034024 34066 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.265 16.374 11448000 11448000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13684 2501 12454 115105 91960 91960 1 EPASSPWASGEKPPAGSEQDGWK Unmodified 2397.0873 0.087318043 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 57.027 57.295 3 3.4282E-11 64983 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 70.99 67.039 104940000 0 0 0 0 0 10715000 8363100 10976000 6659800 10805000 13629000 17162000 0 10020000 16613000 13685 4139 12455 115106;115107;115108;115109;115110;115111;115112;115113;115114 91961;91962;91963;91964;91965;91966;91967;91968;91969;91970;91971 91966 11 EPAVLELEGK Unmodified 1083.5812 0.58119023 2055 Q01518 CAP1 Adenylyl cyclase-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 62.704 61.263 2 0.0023779 69053 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 84.213 50.209 4082900000 69889000 3504600000 34697000 38757000 19037000 32201000 48329000 36165000 0 33776000 52411000 39671000 50687000 40926000 81765000 13686 2055 12456 115115;115116;115117;115118;115119;115120;115121;115122;115123;115124;115125;115126;115127;115128;115129 91972;91973;91974;91975;91976;91977;91978;91979;91980;91981;91982;91983 91981 10 EPAWRPSGIPEK Unmodified 1365.7041 0.70409934 2917 Q6P1K2 PMF1 Polyamine-modulated factor 1 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 49.509 49.864 3 0.0022811 55597 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 49.423 20.617 39804000 0 0 0 0 0 0 0 6476000 0 0 0 0 9104200 11376000 12847000 13687 2917 12457 115130;115131;115132;115133 91984;91985;91986 91985 3 EPDCLESVK Unmodified 1075.4856 0.48557529 5041 Q9UNS1 TIMELESS Protein timeless homolog yes yes 0 0 0 By MS/MS 2 0 1 1 34.208 29.564 2 0.024029 38677 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.692 52.91 15242000 0 15242000 0 0 0 0 0 0 0 0 0 0 0 0 0 13688 5041 12458 115134 91987 91987 1 EPDIKPQK Unmodified 953.5182 0.51819605 2822 Q5VW32 BROX BRO1 domain-containing protein BROX yes yes 0 0 1 By MS/MS 3 0 1 1 15.221 11.696 2 0.043813 15015 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 145.04 90.52 13533000 0 13533000 0 0 0 0 0 0 0 0 0 0 0 0 0 13689 2822 12459 115135 91988 91988 0 EPEAAAPAPGTGGDSVCGETHR Unmodified 2164.9444 0.94435897 2156 Q08379 GOLGA2 Golgin subfamily A member 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 33.65 33.89 3 4.8607E-26 36714 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 94.201 84.143 65918000 0 0 0 0 3335500 2708900 3636300 3168000 3615000 4390100 14027000 12610000 6587600 3812100 8027200 13690 2156 12460 115136;115137;115138;115139;115140;115141;115142;115143;115144;115145;115146 91989;91990;91991;91992;91993;91994;91995;91996;91997;91998 91997 10 EPEAAGPVGTEPTVETLEPLGVLFPSTTK Unmodified 2965.5172 0.51719958 286 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 yes yes 0 0 0 By MS/MS By matching By MS/MS 7.67 3.3 1 2 1 1 1 97.337 96.328 3 1.5441E-40 113677 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 104.6 98.303 47206000 0 42923000 0 0 0 0 0 0 0 2538600 0 0 0 0 1744600 13691 286 12461 115147;115148;115149 91999;92000;92001 92000 3 EPEGPPPSPGK Unmodified 1090.5295 0.52948901 1801 P58012 FOXL2 Forkhead box protein L2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 19.082 19.047 2 0.0048809 19130 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 60.398 30.213 14753000 0 0 0 0 4273900 0 4901500 0 5578100 0 0 0 0 0 0 13692 1801 12462 115150;115151;115152 92002;92003;92004 92004 3 EPEKPIDREK Unmodified 1239.6459 0.64591575 151 O00422 SAP18 Histone deacetylase complex subunit SAP18 yes yes 0 0 2 By MS/MS 2 0 1 1 7.7001 5.4729 3 0.015901 7539 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 86.898 52.214 18885000 0 0 18885000 0 0 0 0 0 0 0 0 0 0 0 0 13693 151 12463 115153 92005 92005 1 EPEKPQVEILSSEGAGEPHSSPELAATPGGPVK Unmodified 3323.6521 0.65212993 4642 Q9NUA8 ZBTB40 Zinc finger and BTB domain-containing protein 40 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 71.675 71.817 4 2.5569E-19 82857 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 46.149 41.73 46467000 0 0 0 0 4697500 0 0 4305300 0 8612700 6401600 9712700 0 3931100 8805800 13694 4642 12464 115154;115155;115156;115157;115158;115159;115160 92006;92007;92008;92009;92010;92011;92012 92012 7 EPELLEPIPYEFMA Oxidation (M) 1692.7957 0.79567604 1509 P46778 RPL21 60S ribosomal protein L21 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.33 2 2 11 2 2 1 1 1 1 1 1 1 1 1 1 1 96.3 95.066 2 6.9502E-24 114983 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.44 123.13 216760000 33034000 98622000 0 0 4677200 3386300 3031000 3481600 4324700 16524000 10850000 9429400 4843700 8320200 16237000 13695 1509 12465 115161;115162;115163;115164;115165;115166;115167;115168;115169;115170;115171;115172;115173;115174;115175 92013;92014;92015;92016;92017;92018;92019;92020;92021;92022;92023;92024;92025;92026 92015 2387 14 EPELLEPIPYEFMA Unmodified 1676.8008 0.80076142 1509 P46778 RPL21 60S ribosomal protein L21 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 100.11 93.687 2 0.0010215 117863 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.643 65.515 138880000 11257000 127620000 0 0 0 0 0 0 0 0 0 0 0 0 0 13696 1509 12465 115176;115177 92027;92028 92027 2 EPELQQYVPQLQNNTILR Unmodified 2182.1382 0.1382314 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 86.629 86.761 3 0.0026708 100277 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 29.092 24.225 12522000 0 0 0 0 0 0 0 0 0 2699000 0 0 0 0 9822600 13697 2378 12466 115178;115179 92029 92029 1 EPEPAPNSVSITGSVDDHFAK Unmodified 2196.0335 0.033491558 2371 Q14135 VGLL4 Transcription cofactor vestigial-like protein 4 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 72.651 67.616 3 3.5957E-48 85853 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 132.13 112.74 40906000 0 40906000 0 0 0 0 0 0 0 0 0 0 0 0 0 13698 2371 12467 115180;115181 92030;92031;92032 92031 3 EPEPEPIVLPSVVPLVPAGTVAK Unmodified 2337.3195 0.31954981 22 A6ND36 FAM83G Protein FAM83G yes yes 0 0 0 By MS/MS By MS/MS 5 3.56 1 1 1 2 1 97.498 94.869 2;3 0.00024502 116260 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 56.48 52.952 42352000 0 41208000 0 0 0 0 0 0 0 0 0 0 0 0 1145000 13699 22 12468 115182;115183;115184 92033;92034;92035 92034 3 EPEPNFQLLDNPAR Unmodified 1638.8002 0.80018457 4011 Q99460 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 78.517 77.857 2 6.6364E-19 90165 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 160.77 148.15 574910000 0 108910000 3002000 21680000 38051000 53751000 12156000 11253000 13397000 73105000 74778000 99321000 11459000 16982000 37064000 13700 4011 12469 115185;115186;115187;115188;115189;115190;115191;115192;115193;115194;115195;115196;115197;115198;115199 92036;92037;92038;92039;92040;92041;92042;92043;92044;92045;92046;92047;92048;92049;92050;92051;92052 92036 16 EPEPPGVVGGPGEK Unmodified 1347.667 0.66704513 3126 Q86SF2 GALNT7 N-acetylgalactosaminyltransferase 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 41.879 41.453 2 0.00092909 51531 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.866 63.948 75641000 0 10834000 0 5803300 4105800 6034600 5846300 6095100 6626000 6590200 9438500 0 8143200 6124500 0 13701 3126 12470 115200;115201;115202;115203;115204;115205;115206;115207;115208;115209;115210 92053;92054;92055;92056;92057;92058;92059;92060;92061 92056 9 EPEQIAFQDEDEAQLNK Unmodified 2002.912 0.91197944 2235 Q13112 CHAF1B Chromatin assembly factor 1 subunit B yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 62.822 63.101 2 2.9685E-38 71508 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 141.13 132.61 11625000 0 0 0 0 0 4152100 0 0 0 0 0 0 0 0 7473200 13702 2235 12471 115211;115212;115213 92062;92063 92062 2 EPEQLRK Unmodified 898.48723 0.48723027 891;1679 P09651;Q32P51;P51991 HNRNPA1;HNRNPA1L2;HNRNPA3 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2;Heterogeneous nuclear ribonucleoprotein A3 no no 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 8.7757 5.3608 2 0.017764 7910 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 132.96 5.3025 1016500000 229130000 787380000 0 0 0 0 0 0 0 0 0 0 0 0 0 13703 891;1679 12472 115214;115215;115216 92064;92065 92064 0 EPERPLPPLGPVAVDPK Unmodified 1809.9989 0.99888437 3551 Q8WUR7 C15orf40 UPF0235 protein C15orf40 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS 5.4 3.77 2 1 2 1 1 1 1 1 76.838 74.088 3 0.00019842 95149 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.851 34.393 41119000 13841000 9125800 8448600 0 0 0 1344600 0 0 0 0 0 0 0 8359000 13704 3551 12473 115217;115218;115219;115220;115221 92066;92067;92068;92069 92068 4 EPESAAEAVK Unmodified 1029.4979 0.49785453 573 O76031 CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 13 1 1 1 2 1 1 1 1 1 1 1 1 17.44 17.612 2 0.0067887 17816 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 64.04 39.117 75292000 0 0 0 6994800 4135100 6203900 6666100 5943400 3920600 6541200 6196600 10976000 5300800 4903900 7509400 13705 573 12474 115222;115223;115224;115225;115226;115227;115228;115229;115230;115231;115232;115233;115234 92070;92071;92072;92073;92074;92075;92076;92077;92078;92079;92080 92072 8 EPESFPFVILGNK Unmodified 1475.766 0.76603089 1648 P51151 RAB9A Ras-related protein Rab-9A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91.597 91.137 2 9.1286E-05 105325 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 110.14 100.18 330910000 0 101220000 2493900 3976600 10459000 17529000 11641000 18402000 17911000 30761000 24622000 24627000 14602000 15571000 37099000 13706 1648 12475 115235;115236;115237;115238;115239;115240;115241;115242;115243;115244;115245;115246;115247;115248 92081;92082;92083;92084;92085;92086;92087;92088;92089;92090;92091;92092;92093 92086 12 EPESILQVLSQMEK Oxidation (M) 1645.8233 0.82328777 1049 P17174 GOT1 Aspartate aminotransferase, cytoplasmic yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.71 3.73 2 2 3 1 3 1 1 1 89.987 87.273 2;3 3.8027E-18 109295 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.04 108.46 168160000 7439200 144730000 0 0 0 0 0 0 0 0 2639900 0 0 2784800 10563000 13707 1049 12476 115249;115250;115251;115252;115253;115254;115255 92094;92095;92096;92097;92098 92094 1467 4 EPEVTISSIRPISER Unmodified 1711.9105 0.9104633 3358 Q8N6H7 ARFGAP2 ADP-ribosylation factor GTPase-activating protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.754 67.835 3 9.3324E-20 77591 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 111.12 94.372 531810000 0 0 0 36514000 19463000 42796000 36210000 29159000 37778000 50627000 58381000 54128000 32882000 40985000 92890000 13708 3358 12477 115256;115257;115258;115259;115260;115261;115262;115263;115264;115265;115266;115267 92099;92100;92101;92102;92103;92104;92105;92106;92107;92108;92109 92102 9 EPEVTVVSQPTEPQPVLIPSININSDSGENK Unmodified 3316.6674 0.66744564 4365 Q9H2G2 SLK STE20-like serine/threonine-protein kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.12 3.72 2 1 5 1 2 1 1 1 1 1 90.007 88.061 3 2.306E-51 108704 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.42 95.518 99224000 8132700 71393000 0 0 0 0 0 0 0 4780000 4511600 2288200 0 1180900 6937700 13709 4365 12478 115268;115269;115270;115271;115272;115273;115274;115275 92110;92111;92112;92113;92114;92115 92112 6 EPFGEISSRYK Unmodified 1311.6459 0.64591575 2838 Q63HN8 RNF213 E3 ubiquitin-protein ligase RNF213 yes yes 0 0 1 By MS/MS By matching 2 0 2 1 1 55.835 49.776 3 0.0025206 68049 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.229 62.109 29872000 27756000 0 2115600 0 0 0 0 0 0 0 0 0 0 0 0 13710 2838 12479 115276;115277 92116;92117 92117 2 EPFGTEGR Unmodified 891.40865 0.4086456 947 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 21.738 21.97 2 0.012186 21843 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.213 62.224 234880000 0 0 0 9185500 6390700 0 11204000 13946000 8828700 0 40232000 31905000 11535000 23927000 77727000 13711 947 12480 115278;115279;115280;115281;115282;115283;115284;115285;115286;115287 92118;92119;92120 92118 3 EPFLQQLK Unmodified 1001.5546 0.55458155 5084 Q9Y262 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 7.76 3.47 3 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 65.442 63.893 2 0.0042815 72576 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 111.28 71.175 708850000 25330000 429570000 16585000 10864000 13445000 17896000 12780000 12133000 12221000 18584000 24831000 24005000 24214000 24648000 41742000 13712 5084 12481 115288;115289;115290;115291;115292;115293;115294;115295;115296;115297;115298;115299;115300;115301;115302;115303;115304 92121;92122;92123;92124;92125;92126;92127;92128;92129;92130;92131;92132;92133;92134;92135 92128 14 EPFLVPAPPPPLK Unmodified 1400.8068 0.80677349 3047 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.76 2.85 3 1 21 1 2 1 1 1 2 1 2 2 2 2 2 2 2 2 85.909 85.242 2;3 7.9061E-14 103496 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 125.82 108 1139000000 8962600 518230000 7256900 27894000 43564000 48821000 40096000 36686000 41829000 58753000 56700000 69136000 49589000 51091000 80424000 13713 3047 12482 115305;115306;115307;115308;115309;115310;115311;115312;115313;115314;115315;115316;115317;115318;115319;115320;115321;115322;115323;115324;115325;115326;115327;115328;115329 92136;92137;92138;92139;92140;92141;92142;92143;92144;92145;92146;92147;92148;92149;92150;92151;92152;92153;92154;92155;92156;92157;92158;92159;92160;92161;92162;92163 92153 24 EPFNLFYIEK Unmodified 1298.6547 0.65468953 2160 Q08554 DSC1 Desmocollin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 87.282 87.352 2 0.0027216 100967 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.629 61.253 297450000 0 0 0 23856000 11815000 25372000 9221300 74684000 14931000 28533000 18662000 28940000 22163000 12114000 27162000 13714 2160 12483 115330;115331;115332;115333;115334;115335;115336;115337;115338;115339;115340;115341 92164;92165;92166;92167;92168;92169;92170;92171;92172;92173;92174;92175 92166 10 EPFPTIYVDSQK Unmodified 1422.7031 0.70309628 366 O43776 NARS Asparagine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 6.1 3.91 4 1 5 1 3 1 1 1 1 1 1 77.134 74.572 2 7.3786E-06 86105 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 109.79 92.354 5211800000 77257000 4923400000 38785000 0 0 8737900 0 9050500 5666100 0 0 0 0 0 148980000 13715 366 12484 115342;115343;115344;115345;115346;115347;115348;115349;115350;115351 92176;92177;92178;92179;92180;92181;92182;92183;92184;92185;92186 92180 10 EPFTFPVK Unmodified 963.50657 0.50656873 4341 Q9H0W9 C11orf54 Ester hydrolase C11orf54 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 77.783 74.034 2 0.038396 92369 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.342 40.73 422230000 0 393510000 28727000 0 0 0 0 0 0 0 0 0 0 0 0 13716 4341 12485 115352;115353 92187 92187 1 EPFTIAQGK Unmodified 989.5182 0.51819605 1365 P35659 DEK Protein DEK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 2 1 1 1 1 1 1 1 1 1 1 1 43.691 43.865 2 0.0036636 50029 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 110.81 64.792 726280000 0 0 0 11874000 45927000 47646000 40996000 47384000 36104000 80251000 93443000 98048000 71802000 51803000 101000000 13717 1365 12486 115354;115355;115356;115357;115358;115359;115360;115361;115362;115363;115364;115365;115366 92188;92189;92190;92191;92192;92193;92194;92195;92196;92197;92198;92199;92200 92200 11 EPFTLEAYYSSPQDLPYPDPAIAQFSVQK Unmodified 3300.5867 0.58667613 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 97.478 92.174 3 1.0152E-47 115895 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.78 104.94 72590000 46505000 0 26085000 0 0 0 0 0 0 0 0 0 0 0 0 13718 1337 12487 115367;115368 92201;92202;92203;92204 92201 4 EPGEIQYLIK Unmodified 1188.639 0.63903946 199 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 77.526 73.399 2 0.0089279 91762 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.948 60.221 57307000 0 57307000 0 0 0 0 0 0 0 0 0 0 0 0 0 13719 199 12488 115369;115370 92205 92205 1 EPGEYAVHIMCDDEDIK Unmodified 2019.8554 0.85539254 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.67 2.87 3 2 1 2 2 1 1 73.829 69.921 3 4.427E-05 88818 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.168 71.391 222930000 114350000 82772000 16753000 0 0 0 0 0 0 0 0 0 0 0 9046300 13720 487 12489 115371;115372;115373;115374;115375;115376 92206;92207;92208;92209;92210;92211 92206 5 EPGEYAVHIMCDDEDIK Oxidation (M) 2035.8503 0.85030716 487 O75369 FLNB Filamin-B yes yes 0 1 0 By MS/MS 2 0 1 1 63.614 55.335 3 0.00020153 74422 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.507 62.59 14492000 14492000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13721 487 12489 115377 92212 92212 614 1 EPGGGAATEEGVNR Unmodified 1342.6113 0.61132116 3859 Q96GX5 MASTL Serine/threonine-protein kinase greatwall yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 17.383 17.618 2 0.0026755 16531 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.019 47.662 20341000 0 0 0 1534700 0 2740200 2733200 1807500 0 0 1833800 3969300 2736900 0 2984900 13722 3859 12490 115378;115379;115380;115381;115382;115383;115384;115385;115386;115387 92213;92214;92215;92216;92217;92218;92219;92220 92216 8 EPGLLASCSDDGEVAFWK Unmodified 1979.8935 0.8934926 575 O76071 CIAO1 Probable cytosolic iron-sulfur protein assembly protein CIAO1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 89.102 84.434 2 2.0553E-63 105902 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 160.69 146.72 79943000 16493000 59268000 4182300 0 0 0 0 0 0 0 0 0 0 0 0 13723 575 12491 115388;115389;115390;115391 92221;92222;92223 92221 2 EPGLLSLVDWAK Unmodified 1326.7184 0.71835242 245 O15047 SETD1A Histone-lysine N-methyltransferase SETD1A yes yes 0 0 0 By MS/MS 10 0 1 1 28.393 29.09 3 0.042343 30859 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 22.578 2.4535 18169000 0 0 0 0 0 0 0 0 0 0 0 18169000 0 0 0 13724 245 12492 115392 92224 92224 1 EPGLQIWR Unmodified 997.53451 0.53451481 819 P06396;CON__Q3SX14 GSN Gelsolin yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.1 70.177 2 0.011473 80671 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 76.847 42.022 + 97944000 0 0 0 13254000 4882100 8213100 6513600 10359000 4597400 6230400 9142200 10258000 8320600 5187400 10986000 13725 819 12493 115393;115394;115395;115396;115397;115398;115399;115400;115401;115402;115403;115404 92225;92226;92227;92228;92229;92230;92231;92232;92233;92234;92235;92236 92225 12 EPGLQIWRVEK Unmodified 1353.7405 0.74048484 819 P06396;CON__Q3SX14 GSN Gelsolin yes no 0 0 1 By MS/MS 2 0 1 1 78.366 70.235 3 0.010233 92489 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.274 50.491 + 5752200 5752200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13726 819 12494 115405 92237 92237 1 EPGPAGRGDGDSGR Unmodified 1326.5913 0.59125442 1802 P58107 EPPK1 Epiplakin yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 6.5959 6.7192 3 0.0090383 4544 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 33.842 31.317 78357000 0 0 0 7766600 5377600 5886500 5810200 6174800 5373300 7864100 9591500 0 8412600 6205100 9895100 13727 1802 12495 115406;115407;115408;115409;115410;115411;115412;115413;115414;115415;115416 92238;92239;92240;92241;92242;92243;92244;92245;92246 92238 9 EPGPFQSSK Unmodified 975.46616 0.46616048 3168 Q86VN1 VPS36 Vacuolar protein-sorting-associated protein 36 yes yes 0 0 0 By MS/MS 3 0 1 1 27.995 23.71 2 0.016282 29787 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 80.219 53.617 16970000 0 16970000 0 0 0 0 0 0 0 0 0 0 0 0 0 13728 3168 12496 115417 92247 92247 1 EPGPIAPSTNSSPVLK Unmodified 1592.841 0.84098675 2426 Q14674 ESPL1 Separin yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 63.015 57.672 2 0.00074877 74066 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.85 68.431 28217000 0 28217000 0 0 0 0 0 0 0 0 0 0 0 0 0 13729 2426 12497 115418;115419 92248 92248 1 EPGPLQCEAK Unmodified 1127.5281 0.5281088 202 O14686 KMT2D Histone-lysine N-methyltransferase 2D yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 27.305 27.287 2 0.039039 29574 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 40.352 9.278 5310300 0 0 0 0 1890400 0 0 0 0 0 0 0 3419900 0 0 13730 202 12498 115420;115421 92249 92249 1 EPGPVLAVSTEEGHNGPSVHK Unmodified 2140.0549 0.054895702 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 0 By MS/MS 2 0 2 2 53.939 50.042 3;4 0.0012455 62560 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 45.707 42.066 47720000 0 0 47720000 0 0 0 0 0 0 0 0 0 0 0 0 13731 3443 12499 115422;115423 92250;92251 92250 1 EPGPVLAVSTEEGHNGPSVHKPSAGQGHPSAVCAEK Unmodified 3616.7329 0.73285664 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 1 By MS/MS 2 0 1 1 59.06 50.834 4 0.031408 69226 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 18.498 14.806 5764200 5764200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13732 3443 12500 115424 92252 92252 1 EPGRTLEPQELAR Unmodified 1494.7791 0.77905519 3576 Q8WWM7 ATXN2L Ataxin-2-like protein yes yes 0 0 1 By MS/MS 2 0 1 1 48.551 44.649 3 0.0061781 56141 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 56.956 37.378 17863000 0 0 17863000 0 0 0 0 0 0 0 0 0 0 0 0 13733 3576 12501 115425 92253 92253 1 EPHGWVVDLVNK Unmodified 1391.7197 0.7197494 5061 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 0 0 0 By MS/MS 2 0 1 1 81.708 73.577 3 0.0024998 96352 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.286 44.247 12603000 12603000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13734 5061 12502 115426 92254 92254 1 EPHIREMK Unmodified 1038.528 0.52804923 5231 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 0 1 By MS/MS 2 0 1 1 19.568 14.983 2 0.041618 21735 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 116.37 86.186 16492000 16492000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13735 5231 12503 115427 92255 92255 0 EPHSSDTELPK Unmodified 1238.5779 0.57789577 1550 P48723 HSPA13 Heat shock 70 kDa protein 13 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 21.729 17.844 3 0.029856 22330 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 31.185 12.918 48642000 0 48642000 0 0 0 0 0 0 0 0 0 0 0 0 0 13736 1550 12504 115428;115429 92256;92257 92257 2 EPIAASTNR Unmodified 957.48796 0.48795855 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS 10 0 1 1 14.127 14.375 2 0.0037416 12759 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 96.111 76.189 19111000 0 0 0 0 0 0 0 0 0 0 0 0 0 19111000 0 13737 2344 12505 115430 92258 92258 1 EPIAASTNRGK Unmodified 1142.6044 0.60438529 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.12 0.331 7 1 2 3 3 11.549 8.476 2;3 0.015567 13417 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.889 52.856 375220000 153630000 76566000 145020000 0 0 0 0 0 0 0 0 0 0 0 0 13738 2344 12506 115431;115432;115433;115434;115435;115436;115437;115438 92259;92260;92261;92262;92263;92264 92261 4 EPIDIEEGIKK Unmodified 1269.6816 0.68163256 4827 Q9P2R7 SUCLA2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 0 0 1 By MS/MS 3 0 1 1 53.777 48.887 3 0.034882 60524 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 38.021 24.929 1630800 0 1630800 0 0 0 0 0 0 0 0 0 0 0 0 0 13739 4827 12507 115439 92265 92265 1 EPIDQIQATISLNTDQTTASSSLPAASQPQVFQAGTSK Unmodified 3929.9494 0.94943416 2407 Q14444 CAPRIN1 Caprin-1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 90.125 86.071 3 7.3353E-74 106759 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.08 99.278 35637000 0 35637000 0 0 0 0 0 0 0 0 0 0 0 0 0 13740 2407 12508 115440;115441 92266;92267 92266 2 EPIEEEPTGAGLNK Unmodified 1482.7202 0.72020291 2890 Q6IQ49 SDE2 Protein SDE2 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 41.788 41.914 2 2.5772E-22 46930 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 166.97 135.55 162010000 0 0 0 8624200 10252000 12531000 12521000 15119000 11106000 18906000 23623000 19881000 17233000 12211000 0 13741 2890 12509 115442;115443;115444;115445;115446;115447;115448;115449;115450;115451;115452 92268;92269;92270;92271;92272;92273;92274;92275;92276;92277;92278;92279 92268 12 EPIERPEEK Unmodified 1125.5666 0.5666028 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.081 14.244 2 3.865E-39 13828 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 211.48 67.358 128650000 0 0 0 5484200 6417300 7903900 6777700 5409600 6938500 14468000 13415000 15400000 15234000 10931000 20268000 13742 5216 12510 115453;115454;115455;115456;115457;115458;115459;115460;115461;115462;115463;115464 92280;92281;92282 92282 1 EPIIEDILNLESSPTASGSSVSPGLYSK Unmodified 2889.4495 0.44951394 4100 Q9BQL6 FERMT1 Fermitin family homolog 1 yes yes 0 0 0 By MS/MS 2 0 1 1 99.031 94.296 3 0.0098817 116646 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 22.975 11.888 21012000 0 21012000 0 0 0 0 0 0 0 0 0 0 0 0 0 13743 4100 12511 115465 92283;92284 92284 2 EPIKEPSEEPLPMETEEEDPKEEPIK Unmodified 3048.4373 0.43729428 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 66.232 66.356 4 5.3407E-08 76000 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 47.38 29.285 37068000 0 0 0 0 5500900 0 0 7133000 0 0 8754500 9408900 0 6270300 0 13744 213 12512 115466;115467;115468;115469;115470 92285;92286;92287;92288;92289 92288 5 EPIKEPSEEPLPMETEEEDPKEEPIK Oxidation (M) 3064.4322 0.4322089 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 1 2 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 58.049 58.345 4 7.31E-07 65969 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 44.11 38.08 72817000 0 0 0 0 0 0 0 0 0 19597000 0 35678000 0 17542000 0 13745 213 12512 115471;115472;115473 92290 92290 286 1 EPILERPYGVQR Unmodified 1455.7834 0.78341229 5063 Q9UPW5 AGTPBP1 Cytosolic carboxypeptidase 1 yes yes 0 0 1 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 49.208 49.167 3 0.025939 54644 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 35.204 13.573 19887000 0 0 0 3959200 0 0 3989700 4769800 0 0 0 0 0 7168800 0 13746 5063 12513 115474;115475;115476;115477 92291 92291 1 EPILSSEPSPAVTPVTPTTLIAPR Unmodified 2472.3476 0.34755547 428 O60749 SNX2 Sorting nexin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 88.257 88.331 3 0.028121 102459 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 18.545 11.67 17089000 0 0 0 0 1584500 2710200 2026200 4071400 0 0 0 3665400 0 3031600 0 13747 428 12514 115478;115479;115480;115481;115482;115483 92292;92293 92292 2 EPILVVSYK Unmodified 1046.6012 0.60119739 3292 Q8IZ73 RPUSD2 RNA pseudouridylate synthase domain-containing protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 71.218 67.935 2 0.04564 83551 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 58.981 40.945 2557500 0 0 2557500 0 0 0 0 0 0 0 0 0 0 0 0 13748 3292 12515 115484 92294 92294 1 EPIMPAPGQEETVR Unmodified 1552.7555 0.75554256 3706 Q93052 LPP Lipoma-preferred partner yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 2 1 1 1 1 1 2 2 1 1 1 54.191 54.337 2 1.531E-12 61449 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 105.46 82.819 156900000 0 0 0 5515500 10620000 3666100 5599400 5890700 3163000 10676000 24566000 32571000 17180000 11866000 25587000 13749 3706 12516 115485;115486;115487;115488;115489;115490;115491;115492;115493;115494;115495;115496;115497;115498;115499 92295;92296;92297;92298;92299;92300;92301;92302;92303 92302 9 EPIMPAPGQEETVR Oxidation (M) 1568.7505 0.75045718 3706 Q93052 LPP Lipoma-preferred partner yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 39.578 39.918 2 0.0005362 43960 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 63.408 45.599 40061000 0 0 0 0 0 2274100 2966300 0 0 4942000 0 11011000 3191200 5381900 10295000 13750 3706 12516 115500;115501;115502;115503;115504;115505;115506 92304;92305;92306;92307 92307 5284 4 EPINSTTPFNSSK Unmodified 1420.6834 0.68342347 3601 Q8WYP5 AHCTF1 Protein ELYS yes yes 0 0 0 By MS/MS 2 0 1 1 48.212 42.572 2 1.2715E-11 55477 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.04 87.037 30549000 0 30549000 0 0 0 0 0 0 0 0 0 0 0 0 0 13751 3601 12517 115507 92308 92308 1 EPIPVLPTVHYNMGGIPTNYK Unmodified 2339.1984 0.19838882 1293 P31040 SDHA Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 91.269 83.138 3 0.00057716 107855 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.656 44.494 20084000 20084000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13752 1293 12518 115508 92309 92309 1 EPIQPETPQPK Unmodified 1262.6507 0.65066678 1583 P49643 PRIM2 DNA primase large subunit yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 33.618 33.803 2 0.0050445 36028 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.915 56.336 82807000 0 0 0 4142400 4469500 8675900 5072700 0 5131900 7283200 13344000 9728100 7407700 6860000 10691000 13753 1583 12519 115509;115510;115511;115512;115513;115514;115515;115516;115517;115518;115519 92310;92311;92312;92313;92314 92312 4 EPITDVSVIIK Unmodified 1212.6966 0.69655434 3089 Q7Z401 DENND4A C-myc promoter-binding protein yes yes 0 0 0 By MS/MS 2 0 1 1 81.756 77.051 2 0.046244 95888 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 56.432 23.591 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13754 3089 12520 115520 92315 92315 1 EPIVGSTDYGK Unmodified 1164.5663 0.56626845 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 41.706 35.812 2 0.0013384 46916 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.815 86.013 192310000 6125900 186190000 0 0 0 0 0 0 0 0 0 0 0 0 0 13755 2344 12521 115521;115522 92316 92316 0 EPIVGSTDYGKDEDSAEALLK Unmodified 2236.0747 0.074687671 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.18 3.74 3 1 7 1 2 1 1 1 1 1 1 1 1 76.068 74.425 3 4.8233E-18 88933 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 103.9 95.401 616960000 90285000 464530000 10172000 0 2908700 0 2280700 5146200 0 0 10087000 9577800 0 4817000 17160000 13756 2344 12522 115523;115524;115525;115526;115527;115528;115529;115530;115531;115532;115533 92317;92318;92319;92320;92321;92322;92323;92324;92325 92320 9 EPKDEAQNEGPATESEAPLK Unmodified 2138.9968 0.9967717 3308 Q8N163 CCAR2 Cell cycle and apoptosis regulator protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 35.353 34.354 3 8.4126E-08 43440 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 48.896 44.37 131120000 8192300 29720000 0 6805100 4246400 0 7098300 5436400 4726700 6187800 14220000 14347000 7802600 5596600 16742000 13757 3308 12523 115534;115535;115536;115537;115538;115539;115540;115541;115542;115543;115544;115545;115546;115547 92326;92327;92328;92329;92330;92331;92332;92333;92334;92335;92336;92337;92338 92328 13 EPLATLVDQSPESLK Unmodified 1625.8512 0.85121708 3037 Q76L83 ASXL2 Putative Polycomb group protein ASXL2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 77.72 77.377 2 7.2552E-10 88706 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 94.767 86.392 79121000 0 32816000 0 0 0 4495200 4408500 3487700 3088500 5622700 0 5202800 5261400 5811300 8926800 13758 3037 12524 115548;115549;115550;115551;115552;115553;115554;115555;115556;115557;115558 92339;92340;92341;92342;92343;92344;92345;92346;92347;92348 92345 10 EPLDFREVGEK Unmodified 1317.6565 0.65648044 25 A6NDU8 C5orf51 UPF0600 protein C5orf51 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.24 2 1 10 1 2 1 1 1 1 1 1 1 1 1 1 53.583 52.156 3 0.0048529 67907 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.498 53.097 173190000 24340000 74843000 0 3703200 3087700 13151000 4352700 2857700 5870300 13083000 10379000 0 7665500 9853000 0 13759 25 12525 115559;115560;115561;115562;115563;115564;115565;115566;115567;115568;115569;115570;115571 92349;92350;92351;92352 92349 4 EPLDLPDNPR Unmodified 1164.5775 0.57750184 3554 Q8WUX9 CHMP7 Charged multivesicular body protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 54.339 54.474 2 0.0017459 61855 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 88.921 78.69 171540000 0 0 0 12372000 10921000 11995000 14019000 11037000 10143000 13433000 17539000 17331000 14985000 10982000 26788000 13760 3554 12526 115572;115573;115574;115575;115576;115577;115578;115579;115580;115581;115582;115583 92353;92354;92355;92356;92357;92358;92359;92360;92361;92362;92363;92364 92355 10 EPLEISISQDVHDSK Unmodified 1695.8315 0.83154427 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 2 2 2 1 2 2 2 1 2 1 1 63.749 63.87 2;3 0.0028996 72921 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 45.915 22.68 146450000 0 0 0 0 10979000 14621000 10530000 9200600 15152000 19167000 20137000 12647000 14095000 13950000 5973800 13761 3023 12527 115584;115585;115586;115587;115588;115589;115590;115591;115592;115593;115594;115595;115596;115597;115598;115599;115600;115601 92365;92366;92367;92368;92369;92370;92371;92372;92373 92366 8 EPLGNVLFSPICLSTSLSLAQVGAK Unmodified 2600.3884 0.38837443 1383 P36952 SERPINB5 Serpin B5 yes yes 0 0 0 By MS/MS 2 0 1 1 101.4 96.691 3 1.2772E-37 119474 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.98 102.88 20879000 0 20879000 0 0 0 0 0 0 0 0 0 0 0 0 0 13762 1383 12528 115602 92374 92374 1 EPLGPALAHELR Unmodified 1301.7092 0.70918471 2256 Q13228 SELENBP1 Selenium-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 63.409 63.918 3 0.012705 72989 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 37.998 30.543 27884000 0 0 0 0 0 0 0 0 0 0 0 7869000 0 0 20015000 13763 2256 12529 115603;115604 92375 92375 1 EPLGTHGHMK Oxidation (M) 1121.5288 0.52877751 2654 Q2NL82 TSR1 Pre-rRNA-processing protein TSR1 homolog yes yes 0 1 0 By matching By MS/MS 2 0 2 1 1 6.5451 3.7203 2 0.023058 5576 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 60.436 34.052 53170000 45187000 0 7983400 0 0 0 0 0 0 0 0 0 0 0 0 13764 2654 12530 115605;115606 92376 92376 1 EPLGVNAK Unmodified 826.45487 0.45486751 1126 P21399 ACO1 Cytoplasmic aconitate hydratase yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.3 2.25 2 21 1 1 2 2 2 2 2 2 2 1 2 2 1 1 24.425 24.245 2 0.011473 36335 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 76.847 9.8117 2894900000 0 679320000 1640100 210990000 121270000 164660000 133210000 249060000 127770000 105510000 153120000 396300000 407020000 53280000 91788000 13765 1126 12531 115607;115608;115609;115610;115611;115612;115613;115614;115615;115616;115617;115618;115619;115620;115621;115622;115623;115624;115625;115626;115627;115628;115629 92377;92378;92379;92380;92381;92382;92383;92384;92385;92386;92387;92388;92389;92390 92389 14 EPLIELFVK Unmodified 1086.6325 0.63249752 5270 Q9Y696 CLIC4 Chloride intracellular channel protein 4 yes yes 0 0 0 By MS/MS 2 0 1 1 97.359 89.228 2 0.037989 115160 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.999 46.367 13630000 13630000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13766 5270 12532 115630 92391 92391 1 EPLIPASPK Unmodified 950.54368 0.54368251 5260 Q9Y613 FHOD1 FH1/FH2 domain-containing protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 47.051 47.378 2 0.0083723 52081 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.812 52.848 81546000 0 0 0 0 0 8740800 6960000 6546600 0 10350000 9678000 10793000 8247200 8647900 11583000 13767 5260 12533 115631;115632;115633;115634;115635;115636;115637;115638;115639 92392;92393;92394;92395;92396;92397 92394 6 EPLMEEYSIATQVWK Unmodified 1822.8811 0.881137 2053 Q01433 AMPD2 AMP deaminase 2 yes yes 0 0 0 By MS/MS 2 0 1 1 94.168 89.272 2 0.00069237 110748 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.77 105.34 21076000 0 21076000 0 0 0 0 0 0 0 0 0 0 0 0 0 13768 2053 12534 115640 92398 92398 1 EPLMEEYSIATQVWK Oxidation (M) 1838.8761 0.87605162 2053 Q01433 AMPD2 AMP deaminase 2 yes yes 0 1 0 By MS/MS 2 0 2 2 88.449 83.607 2 0.018836 104356 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 50.149 32.982 15414000 0 15414000 0 0 0 0 0 0 0 0 0 0 0 0 0 13769 2053 12534 115641;115642 92399;92400 92399 3335 1 EPLNLFYIER Unmodified 1292.6765 0.6764876 2417 Q14574 DSC3 Desmocollin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 85.063 85.135 2 0.012007 98389 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.463 48.46 49297000 0 0 0 6247300 0 4998100 0 6966900 5367300 7415600 0 5525000 4506200 1919500 6351500 13770 2417 12535 115643;115644;115645;115646;115647;115648;115649;115650;115651 92401;92402 92401 2 EPLPEYVR Unmodified 1001.5182 0.51819605 5010 Q9ULX3 NOB1 RNA-binding protein NOB1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 50.051 50.066 2 0.0096192 56391 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 82.305 52.498 70895000 0 0 0 6970100 5286000 0 10794000 10155000 9854600 9716600 11128000 0 6990300 0 0 13771 5010 12536 115652;115653;115654;115655;115656;115657;115658;115659;115660 92403;92404;92405;92406;92407;92408;92409 92406 7 EPLSNDGAAPGATPASGSAASK Unmodified 1954.9232 0.92321283 4360 Q9H270 VPS11 Vacuolar protein sorting-associated protein 11 homolog yes yes 0 0 0 By MS/MS 10 0 1 1 34.356 35.083 2 0.0091882 37575 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.482 43.637 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13772 4360 12537 115661 92410 92410 1 EPLSVGVAR Unmodified 926.51853 0.5185304 5370 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 2 1 1 1 1 1 1 1 39.672 39.999 2 0.031208 44587 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 47.849 6.3464 + 301790000 0 0 0 0 0 0 26688000 39940000 20709000 26999000 39369000 34603000 23774000 27325000 62387000 13773 5370 12538 115662;115663;115664;115665;115666;115667;115668;115669;115670;115671 92411 92411 1 EPLTAYNYK Unmodified 1097.5393 0.53932542 5043 Q9UNW1 MINPP1 Multiple inositol polyphosphate phosphatase 1 yes yes 0 0 0 By MS/MS 2 0 1 1 47.557 41.994 2 0.0077153 54711 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.19 78.888 49561000 0 49561000 0 0 0 0 0 0 0 0 0 0 0 0 0 13774 5043 12539 115672 92412 92412 1 EPLTQAVGLSTQAEGTR Unmodified 1756.8955 0.89554151 2756 Q5SRE5 NUP188 Nucleoporin NUP188 homolog yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 64.744 65 2 0.00017656 73723 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.552 64.17 20242000 0 0 0 0 0 4360100 2446100 4241400 0 0 0 4983200 0 0 4211100 13775 2756 12540 115673;115674;115675;115676;115677;115678 92413;92414;92415;92416 92415 4 EPLVATNLPGR Unmodified 1165.6455 0.64552182 1446 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 57.569 57.774 2 0.00047106 66299 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 105.1 81.146 168910000 0 0 0 0 20790000 18895000 0 0 0 19511000 19246000 31225000 0 31713000 27530000 13776 1446 12541 115679;115680;115681;115682;115683;115684;115685 92417;92418;92419;92420;92421;92422;92423;92424;92425 92424 9 EPLVATNLPGRGQLQK Unmodified 1719.9632 0.96316757 1446 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 58.638 58.711 3 0.01635 66880 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 27.208 23.144 42898000 0 0 0 0 4623400 4472600 6190600 6209800 4723700 6275500 10403000 0 0 0 0 13777 1446 12542 115686;115687;115688;115689;115690;115691;115692 92426;92427 92426 2 EPLVDVVDPK Unmodified 1109.5968 0.5968403 4069 Q99873 PRMT1 Protein arginine N-methyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 69.826 64.325 2 0.0053134 79355 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 126.31 107.33 3328300000 151190000 3133900000 43200000 0 0 0 0 0 0 0 0 0 0 0 0 13778 4069 12543 115693;115694;115695;115696;115697 92428;92429;92430;92431;92432 92432 4 EPLWIRPDAPSR Unmodified 1435.7572 0.75719754 910 P0DN79;P35520 CBS Cystathionine beta-synthase yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 61.739 61.98 3 0.00078604 69886 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.802 45.936 157740000 0 0 0 0 0 21040000 9086000 7237800 7876300 11677000 17491000 18897000 12485000 18366000 33587000 13779 910 12544 115698;115699;115700;115701;115702;115703;115704;115705;115706;115707 92433;92434;92435;92436;92437;92438;92439;92440;92441;92442;92443 92437 11 EPLYYWQQTEDDLTVTIRLPEDSTK Unmodified 3039.4713 0.47131202 3975 Q96RS6 NUDCD1 NudC domain-containing protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 96.759 88.629 3 6.2706E-126 114457 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 163.18 153.34 59162000 59162000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13780 3975 12545 115708 92444 92444 1 EPNLEPMVEK Unmodified 1184.5747 0.57472465 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 0 By MS/MS 10 0 1 1 51.711 51.92 2 0.018954 57886 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 48.091 32.21 9648200 0 0 0 0 0 0 0 0 0 0 0 0 0 9648200 0 13781 5216 12546 115709 92445;92446 92446 2 EPNLTYEPQLPYVEK Unmodified 1818.904 0.90398093 2136 Q07157 TJP1 Tight junction protein ZO-1 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 81.908 79.637 2 1.4959E-15 98278 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 147.33 132.91 90916000 0 82706000 0 0 0 0 0 0 8210100 0 0 0 0 0 0 13782 2136 12547 115710;115711 92447;92448 92447 2 EPNPMVQLSIQDVTQESK Oxidation (M) 2057.9939 0.99393493 4128 Q9BSJ8 ESYT1 Extended synaptotagmin-1 yes yes 0 1 0 By MS/MS 3 0 1 1 78.218 74.799 2 8.5617E-05 89946 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 72.089 57.528 2268700 0 2268700 0 0 0 0 0 0 0 0 0 0 0 0 0 13783 4128 12548 115712 92449 92449 5613 1 EPNPPIDEVISTPGVVAR Unmodified 1888.9894 0.9894419 1683 P52294 KPNA1 Importin subunit alpha-5;Importin subunit alpha-5, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 81.517 81.578 2;3 2.7892E-84 94303 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 184.11 169.69 945660000 0 0 0 34376000 52593000 69439000 52676000 73583000 47200000 105980000 96243000 112590000 75153000 89684000 136140000 13784 1683 12549 115713;115714;115715;115716;115717;115718;115719;115720;115721;115722;115723;115724;115725;115726;115727;115728;115729;115730;115731;115732;115733;115734;115735;115736 92450;92451;92452;92453;92454;92455;92456;92457;92458;92459;92460;92461;92462;92463;92464;92465;92466;92467;92468 92452 17 EPNSENVDISSGGGVTGWK Unmodified 1931.8861 0.88609904 1830 P61026 RAB10 Ras-related protein Rab-10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 63.993 63.313 2 1.0989E-64 72619 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 193.96 169.58 465750000 0 52768000 0 13504000 18100000 24024000 26651000 28406000 22678000 50163000 51385000 40525000 31615000 37714000 68220000 13785 1830 12550 115737;115738;115739;115740;115741;115742;115743;115744;115745;115746;115747;115748;115749;115750 92469;92470;92471;92472;92473;92474;92475;92476;92477;92478;92479;92480;92481;92482;92483;92484;92485;92486 92478 18 EPPAPAQQLQPQPVAVQGPEPARVEK Unmodified 2760.4559 0.45587715 4504 Q9HC07 TMEM165 Transmembrane protein 165 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.346 65.433 3 1.2577E-27 74375 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.467 79.239 135880000 0 0 0 10291000 6081100 9173000 11039000 8514100 9403900 12832000 13466000 17816000 8830600 13762000 14673000 13786 4504 12551 115751;115752;115753;115754;115755;115756;115757;115758;115759;115760;115761;115762 92487;92488;92489;92490;92491;92492;92493;92494;92495;92496;92497;92498;92499;92500;92501 92490 15 EPPGSEPSAFAFLNA Unmodified 1532.7147 0.7147236 3931 Q96N21 ENTHD2 AP-4 complex accessory subunit tepsin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 92.245 91.939 2 8.9694E-19 106828 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 107.15 100.27 144770000 0 31347000 0 3217100 8870600 6871200 8007800 8593700 8240900 13739000 11003000 14231000 9054000 8245700 13346000 13787 3931 12552 115763;115764;115765;115766;115767;115768;115769;115770;115771;115772;115773;115774;115775 92502;92503;92504;92505;92506;92507;92508;92509;92510;92511;92512 92509 9 EPPGSTAGLPQEPK Unmodified 1406.7042 0.70415892 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 0 0 By MS/MS 10 0 1 1 40.912 41.665 2 0.02262 45970 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.004 30.14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13788 4139 12553 115776 92513 92513 1 EPPIIIVPESLEADTK Unmodified 1749.94 0.94003209 4254 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 87.787 87.857 2 0.00056334 101951 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 66.262 57.749 32518000 0 0 0 1139200 2555500 2372500 2445100 1944000 1949600 3728700 2600000 4177000 2142300 2320800 5143100 13789 4254 12554 115777;115778;115779;115780;115781;115782;115783;115784;115785;115786;115787;115788 92514;92515;92516;92517;92518;92519 92518 6 EPPKPEQVESR Unmodified 1294.6517 0.65172941 421 O60664 PLIN3 Perilipin-3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 17.094 17.273 3 1.3281E-06 17552 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 119.27 103.9 1980200000 0 0 0 110740000 125130000 151860000 128560000 203900000 120550000 138200000 166510000 228900000 242040000 179370000 184410000 13790 421 12555 115789;115790;115791;115792;115793;115794;115795;115796;115797;115798;115799;115800 92520;92521;92522;92523;92524;92525;92526;92527;92528;92529;92530;92531;92532;92533;92534;92535;92536;92537;92538;92539;92540;92541;92542;92543;92544;92545;92546;92547;92548;92549;92550 92546 31 EPPLSLTIHLTSPVVREEMEK Oxidation (M) 2420.2621 0.26211129 2207 Q12906 ILF3 Interleukin enhancer-binding factor 3 yes yes 0 1 1 By MS/MS 2 0 1 1 88.051 79.92 4 0.00022716 104068 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.989 50.509 12512000 12512000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13791 2207 12556 115801 92551 92551 3591 1 EPPLTPVPLK Unmodified 1089.6434 0.64339656 895 P09884 POLA1 DNA polymerase alpha catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68.03 67.263 2 0.041245 76219 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.534 39.766 180270000 8891700 0 8008900 8595900 7690200 17246000 10282000 10452000 12277000 14043000 14900000 16228000 14623000 13840000 23194000 13792 895 12557 115802;115803;115804;115805;115806;115807;115808;115809;115810;115811;115812;115813;115814;115815 92552;92553;92554 92552 1 EPPPEFEFIADPPSISAFDLDVVK Unmodified 2658.3105 0.31050127 2539 Q15459 SF3A1 Splicing factor 3A subunit 1 yes yes 0 0 0 By MS/MS By MS/MS 2.4 0.49 3 2 2 3 100.17 96.073 2;3 3.1309E-65 118849 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 156.67 142.93 134170000 10119000 124050000 0 0 0 0 0 0 0 0 0 0 0 0 0 13793 2539 12558 115816;115817;115818;115819;115820 92555;92556;92557;92558 92558 4 EPPPGMFVVPDTVDMTK Oxidation (M) 1874.8794 0.87942244 4443 Q9H832 UBE2Z Ubiquitin-conjugating enzyme E2 Z yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.93 2.72 2 13 2 1 1 2 1 1 1 1 1 2 2 81.001 80.409 2 7.1683E-13 98321 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.22 98.989 154320000 0 112330000 0 1598400 1735000 7665000 1842900 4148500 1640500 0 6198800 2974700 7732700 6456500 0 13794 4443 12559 115821;115822;115823;115824;115825;115826;115827;115828;115829;115830;115831;115832;115833;115834;115835 92559;92560;92561;92562;92563;92564;92565;92566;92567;92568;92569 92562 5885;5886 11 EPPPGMFVVPDTVDMTK Unmodified 1858.8845 0.88450782 4443 Q9H832 UBE2Z Ubiquitin-conjugating enzyme E2 Z yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.67 3.74 2 2 5 4 1 1 1 1 1 87.532 85.799 2;3 4.4926E-05 99486 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.24 67.511 407390000 0 387900000 0 0 0 1918600 0 2772300 0 2973800 0 0 0 3289800 8533000 13795 4443 12559 115836;115837;115838;115839;115840;115841;115842;115843;115844 92570;92571;92572;92573;92574;92575 92574 5 EPPPGMFVVPDTVDMTK 2 Oxidation (M) 1890.8743 0.87433707 4443 Q9H832 UBE2Z Ubiquitin-conjugating enzyme E2 Z yes yes 0 2 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 74.165 73.378 2 1.4402E-08 90385 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.19 66.962 43366000 0 15365000 0 0 0 0 5719200 0 6305700 0 8327300 7648900 0 0 0 13796 4443 12559 115845;115846;115847;115848;115849;115850;115851 92576;92577;92578;92579;92580 92577 5885;5886 5 EPPPPGRQPPPAPPEQADGNAPGPQPPPVR Unmodified 3043.5264 0.52641633 2212 Q12948 FOXC1 Forkhead box protein C1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 1 1 1 2 2 2 2 2 2 2 55.77 55.899 3;4 3.5785E-24 63149 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 59.691 53.463 150750000 0 0 0 10609000 10990000 4275300 5537700 3679100 10373000 17859000 17849000 22104000 12125000 11995000 23352000 13797 2212 12560 115852;115853;115854;115855;115856;115857;115858;115859;115860;115861;115862;115863;115864;115865;115866;115867;115868;115869;115870;115871;115872 92581;92582;92583;92584;92585;92586;92587;92588;92589;92590;92591;92592;92593;92594 92582 14 EPPPPGRQPPPAPPEQADGNAPGPQPPPVRIQDIK Unmodified 3640.875 0.87502785 2212 Q12948 FOXC1 Forkhead box protein C1 yes yes 0 0 2 By MS/MS 2 0 1 1 73.623 70.671 4 0.0058988 86436 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 21.822 16.916 5938800 0 0 5938800 0 0 0 0 0 0 0 0 0 0 0 0 13798 2212 12561 115873 92595 92595 1 EPPQGAHFLSR Unmodified 1237.6204 0.62036971 722 P00374 DHFR Dihydrofolate reductase yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching 6.57 3.96 3 4 2 1 1 1 1 1 40.584 38.257 2;3 0.0075928 42140 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 48.044 40.5 194770000 168880000 0 8745700 0 0 1969100 0 0 1720800 0 4644600 8816000 0 0 0 13799 722 12562 115874;115875;115876;115877;115878;115879;115880 92596;92597;92598 92598 3 EPPRASPPGGLAEPPGSAGPQAGPTVVPGSATPMETGIAETPEGR Oxidation (M) 4290.0863 0.08627877 397 O60341 KDM1A Lysine-specific histone demethylase 1A yes yes 0 1 1 By matching By matching By matching By matching By MS/MS By matching By matching 10 0 7 1 1 1 1 1 1 1 76.296 76.361 4 3.5188E-19 88290 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 42.931 38.972 46192000 0 0 0 2738500 0 0 5592800 5947200 7768700 11386000 6523900 0 0 6234700 0 13800 397 12563 115881;115882;115883;115884;115885;115886;115887 92599 92599 498 1 EPPSSPLQPQK Unmodified 1206.6245 0.62445203 3640 Q92615 LARP4B La-related protein 4B yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.22 33.404 2 0.0068298 36628 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 55.567 26.84 68167000 0 0 0 3777400 3277300 5210000 5321700 3926900 4862800 7381200 7646800 6293700 8229400 6018800 6220800 13801 3640 12564 115888;115889;115890;115891;115892;115893;115894;115895;115896;115897;115898;115899 92600;92601;92602;92603;92604;92605;92606;92607;92608 92603 8 EPPTDVTPTFLTTGVLSTLR Unmodified 2144.1365 0.13650007 1612 P49915 GMPS GMP synthase [glutamine-hydrolyzing] yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 96.258 96.389 2 6.5477E-37 112035 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 125.28 111.6 24724000 0 0 0 0 0 0 0 0 0 8405600 0 0 0 1277200 15041000 13802 1612 12565 115900;115901;115902;115903 92609;92610;92611 92609 3 EPPYRVPRDDWEEK Unmodified 1814.8588 0.85876208 1473 P43243 MATR3 Matrin-3 yes yes 0 0 2 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 47.335 47.712 3 0.0034902 52632 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.482 31.16 41590000 0 0 0 0 0 3574800 0 0 0 3582200 0 9185300 6490000 7779200 10979000 13803 1473 12566 115904;115905;115906;115907;115908;115909 92612 92612 1 EPQEERSQQQDDIEELETK Unmodified 2330.051 0.050992116 4393 Q9H4A3 WNK1 Serine/threonine-protein kinase WNK1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 3 9 1 1 1 1 1 1 1 1 1 1 1 1 47.544 46.075 3 2.0036E-23 59146 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.57 110.45 145640000 15612000 52322000 3985200 0 4723500 6785600 7296700 0 0 12950000 12683000 0 12694000 8072900 8511400 13804 4393 12567 115910;115911;115912;115913;115914;115915;115916;115917;115918;115919;115920;115921 92613;92614;92615;92616;92617;92618;92619;92620;92621;92622;92623;92624;92625 92617 12 EPQKPEQPTPR Unmodified 1305.6677 0.66771383 2840;5195 Q641Q2;Q9Y4E1 FAM21A;FAM21C WASH complex subunit FAM21A;WASH complex subunit FAM21C no no 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 12.884 13.253 3 0.021016 12525 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 31.535 20.276 48308000 0 0 0 0 0 0 0 0 0 0 11902000 0 19176000 0 17230000 13805 2840;5195 12568 115922;115923;115924 92626;92627;92628 92628 2 EPQKPEQPTPRK Unmodified 1433.7627 0.76267685 2840;5195 Q641Q2;Q9Y4E1 FAM21A;FAM21C WASH complex subunit FAM21A;WASH complex subunit FAM21C no no 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 11.908 8.811 3 0.0066732 11367 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 77.674 58.708 17248000 4954400 0 12294000 0 0 0 0 0 0 0 0 0 0 0 0 13806 2840;5195 12569 115925;115926 92629 92629 0 EPQPEVAAAEEEK Unmodified 1425.6624 0.66235368 285 O15427 SLC16A3 Monocarboxylate transporter 4 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 34.387 34.709 2 0.0020394 38251 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 90.434 62.225 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13807 285 12570 115927;115928 92630;92631 92631 2 EPQRGMGSMPK Unmodified 1216.5693 0.56926211 4104 Q9BR76 CORO1B Coronin-1B yes yes 0 0 1 By MS/MS By matching 2 0 2 1 1 23.075 19.154 2 0.0046749 27346 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 123.62 105.75 82653000 82089000 0 563870 0 0 0 0 0 0 0 0 0 0 0 0 13808 4104 12571 115929;115930 92632 92632 0 EPQRGMGYMPK Unmodified 1292.6006 0.60056224 5008 Q9ULV4 CORO1C Coronin-1C yes yes 0 0 1 By MS/MS 2 0 2 2 38.847 32.285 2;3 0.0042709 44773 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.668 34.086 263050000 263050000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13809 5008 12572 115931;115932 92633;92634 92633 2 EPQRGMGYMPK Oxidation (M) 1308.5955 0.59547686 5008 Q9ULV4 CORO1C Coronin-1C yes yes 0 1 1 By MS/MS 2 0 1 1 23.305 18.329 2 0.004706 26193 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.309 24.711 18332000 18332000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13810 5008 12572 115933 92635 92635 6352 0 EPQVYTLPPSREEMTK Unmodified 1903.935 0.93496349 749 P01859 IGHG2 Ig gamma-2 chain C region no no 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 56.694 56.444 3 0.040389 65580 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 25.866 10.101 18710000 0 0 0 6009100 0 0 0 12701000 0 0 0 0 0 0 0 13811 749 12573 115934;115935 92636 92636 1 EPQYSSLSAAR Unmodified 1207.5833 0.5833155 3685 Q92908 GATA6 Transcription factor GATA-6 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 8 1 1 1 1 1 1 1 1 36.388 36.608 2 0.0072105 40047 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 54.608 34.087 26646000 0 0 0 0 2126600 0 2608100 3172900 0 3760800 3527400 4301200 3960600 3188100 0 13812 3685 12574 115936;115937;115938;115939;115940;115941;115942;115943 92637;92638;92639;92640 92640 4 EPREGGGAIEEEAK Unmodified 1470.6951 0.69505079 3475 Q8TAQ2 SMARCC2 SWI/SNF complex subunit SMARCC2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 1 3 2 22.21 18.517 2;3 0.00039626 23111 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 79.875 74.16 206200000 4566800 189850000 11781000 0 0 0 0 0 0 0 0 0 0 0 0 13813 3475 12575 115944;115945;115946;115947;115948;115949 92641;92642;92643;92644 92642 3 EPSAAAPTGAGGVAPGSGNNSGGPSLLVPLPVNPPSSPTPSFSDAK Unmodified 4210.0818 0.081845319 470 O75175 CNOT3 CCR4-NOT transcription complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 2 1 1 2 2 2 2 2 2 92.132 92.231 3;4 6.195E-13 107337 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 32.206 30.866 67427000 0 0 0 0 4181400 1759300 1113800 6178700 0 13904000 9505400 10274000 0 4539300 15972000 13814 470 12576 115950;115951;115952;115953;115954;115955;115956;115957;115958;115959;115960;115961;115962;115963;115964;115965 92645;92646;92647;92648;92649;92650;92651;92652;92653 92653 9 EPSAPSIPTPAYQSSPAGGHAPTPPTPAPR Unmodified 2935.4464 0.44643467 3549 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 71.409 71.468 3 2.396E-40 82165 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 84.365 77.861 116900000 0 0 0 5958300 3912400 15710000 8544500 6760600 0 13174000 11222000 12970000 7985900 10065000 20600000 13815 3549 12577 115966;115967;115968;115969;115970;115971;115972;115973;115974;115975;115976 92654;92655;92656;92657;92658;92659;92660;92661;92662 92654 9 EPSATPPISNLTK Unmodified 1353.714 0.71399532 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 59.024 55.829 2 0.0052171 64294 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 64.374 53.21 130020000 0 107310000 1504200 0 0 0 21207000 0 0 0 0 0 0 0 0 13816 1286 12578 115977;115978;115979 92663;92664;92665 92663 3 EPSEEPLPMETEEEDPK Unmodified 1984.8459 0.84593329 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 58.379 58.531 2 0.0060576 66657 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 52.693 48.808 22020000 0 0 0 0 0 6952300 0 0 3632100 2817100 0 0 4693700 3925300 0 13817 213 12579 115980;115981;115982;115983;115984 92666;92667;92668 92666 3 EPSEEPLPMETEEEDPKEEPIK Oxidation (M) 2597.1578 0.15782495 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 55.212 54.026 3 6.9467E-81 61903 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 146.97 146.97 1376700000 28139000 63357000 0 74227000 99817000 92928000 119090000 89968000 111070000 111750000 108010000 137450000 149750000 106360000 84829000 13818 213 12580 115985;115986;115987;115988;115989;115990;115991;115992;115993;115994;115995;115996;115997;115998;115999 92669;92670;92671;92672;92673;92674;92675;92676;92677;92678;92679;92680;92681;92682;92683;92684;92685 92685 286 17 EPSEEPLPMETEEEDPKEEPIK Unmodified 2581.1629 0.16291033 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 65.393 64.213 3 1.2763E-80 73519 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 147.25 142.8 1057600000 29132000 116070000 0 46334000 51358000 66677000 44705000 82981000 61843000 84857000 86085000 130500000 63473000 82361000 111240000 13819 213 12580 116000;116001;116002;116003;116004;116005;116006;116007;116008;116009;116010;116011;116012;116013;116014 92686;92687;92688;92689;92690;92691;92692;92693;92694;92695;92696;92697;92698;92699;92700;92701;92702;92703;92704;92705 92686 19 EPSEVPTPK Unmodified 982.49713 0.49712625 1048 P17096 HMGA1 High mobility group protein HMG-I/HMG-Y yes yes 0 0 0 By MS/MS 1 0 1 1 108.99 109.88 2 0.0082493 102408 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 90.657 61.319 64449000 0 64449000 0 0 0 0 0 0 0 0 0 0 0 0 0 13820 1048 12581 116015 92706 92706 1 EPSGGGGTALLNK Unmodified 1199.6146 0.61461563 1531 P47974 ZFP36L2 Zinc finger protein 36, C3H1 type-like 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.404 33.588 2 0.0010352 36651 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 66.056 45.535 131970000 0 0 0 6502700 10262000 7603900 10417000 10003000 8248000 12418000 12421000 15084000 12443000 12930000 13636000 13821 1531 12582 116016;116017;116018;116019;116020;116021;116022;116023;116024;116025;116026;116027 92707;92708;92709;92710;92711;92712;92713;92714;92715;92716;92717;92718 92709 10 EPSITQGNTEDQGSGPSETKPVVSISR Unmodified 2799.3523 0.35225951 2443 Q14746 COG2 Conserved oligomeric Golgi complex subunit 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 56.09 56.324 3 7.2839E-08 63850 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 43.099 33.382 27037000 0 0 0 0 0 3675300 5470000 0 0 5874900 0 0 0 0 12017000 13822 2443 12583 116028;116029;116030;116031 92719;92720;92721;92722 92720 4 EPSLFAVAK Unmodified 960.52803 0.52803245 3087 Q7Z3U7 MON2 Protein MON2 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 73.208 67.663 2 0.032444 85361 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.252 27.014 64760000 0 64760000 0 0 0 0 0 0 0 0 0 0 0 0 0 13823 3087 12584 116032 92723 92723 1 EPSLHLDTPSK Unmodified 1222.6194 0.61936665 3621 Q92547 TOPBP1 DNA topoisomerase 2-binding protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 42.898 43.083 3 0.0045455 48124 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 54.772 36.582 109420000 0 0 0 7973800 6876900 8695900 0 7203000 6617200 8192700 15201000 13134000 10428000 10256000 14837000 13824 3621 12585 116033;116034;116035;116036;116037;116038;116039;116040;116041;116042;116043 92724;92725;92726;92727;92728;92729;92730 92730 6 EPSPPIDEVINTPR Unmodified 1562.794 0.79403656 424 O60684 KPNA6 Importin subunit alpha-7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 1 2 1 1 1 2 1 2 2 2 2 73.435 73.536 2;3 7.6003E-15 84709 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 148.19 108.57 894770000 0 0 0 41368000 36400000 85084000 48994000 40765000 36776000 89932000 80170000 108220000 86123000 93919000 147020000 13825 424 12586 116044;116045;116046;116047;116048;116049;116050;116051;116052;116053;116054;116055;116056;116057;116058;116059;116060;116061 92731;92732;92733;92734;92735;92736;92737;92738;92739;92740;92741;92742;92743;92744;92745;92746;92747;92748 92743 17 EPSPRVDVSCEPLEGVEK Unmodified 2025.9677 0.96772018 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 67.806 61.505 3 5.1051E-05 79304 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 57.708 49.214 60280000 8568400 51712000 0 0 0 0 0 0 0 0 0 0 0 0 0 13826 2203 12587 116062;116063;116064 92749;92750;92751;92752 92749 4 EPSQAAAIHPDNCEESEVSER Unmodified 2354.0081 0.0080814435 4275 Q9BZQ8 FAM129A Protein Niban yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 38.753 39.107 3 7.475E-06 42458 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.469 57.851 46016000 0 0 0 0 0 4981100 4415700 0 0 7942300 5960400 6143200 3303300 4358900 8911200 13827 4275 12588 116065;116066;116067;116068;116069;116070;116071;116072 92753;92754;92755;92756;92757 92755 5 EPSQDTVATEPSEVEGSAANK Unmodified 2144.971 0.97095088 3978 Q96RU2 USP28 Ubiquitin carboxyl-terminal hydrolase 28 yes yes 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 42.419 42.543 2 0.046794 47693 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 40.552 35.375 21548000 0 0 0 1073700 0 2776100 1841000 1420200 1642400 2928600 4076700 0 3167700 2621400 0 13828 3978 12589 116073;116074;116075;116076;116077;116078;116079;116080;116081 92758 92758 0 EPSREGPQK Unmodified 1026.5094 0.50942227 4751 Q9NYU2 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 5.6514 2.3506 2 0.044611 4369 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.635 48.277 98820000 0 98820000 0 0 0 0 0 0 0 0 0 0 0 0 0 13829 4751 12590 116082;116083 92759;92760 92760 2 EPSSQLFSKPEVIK Unmodified 1587.8508 0.85082315 4424 Q9H6T0 ESRP2 Epithelial splicing regulatory protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.42 2 1 1 24 1 1 2 2 2 2 2 2 2 2 2 2 2 2 62.055 61.823 2;3 1.1367E-05 70291 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.91 55.546 326560000 0 7533900 15848000 14391000 15194000 21656000 23221000 31191000 15841000 25857000 26388000 37739000 20955000 26556000 44187000 13830 4424 12591 116084;116085;116086;116087;116088;116089;116090;116091;116092;116093;116094;116095;116096;116097;116098;116099;116100;116101;116102;116103;116104;116105;116106;116107;116108;116109 92761;92762;92763;92764;92765;92766;92767;92768;92769;92770;92771;92772;92773;92774;92775;92776;92777 92775 14 EPSSVLVQPLR Unmodified 1223.6874 0.68738664 3029 Q71RC2 LARP4 La-related protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 63.559 63.596 2 0.0060236 72782 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 57.598 46.108 38378000 0 0 0 3431600 2973200 4698100 3436300 0 3374600 0 5820900 0 3740700 5217900 5684800 13831 3029 12592 116110;116111;116112;116113;116114;116115;116116;116117;116118;116119 92778;92779;92780;92781;92782;92783;92784;92785;92786;92787 92778 10 EPSSYDFVYHYG Unmodified 1462.6041 0.60411052 3895 Q96JJ3 ELMO2 Engulfment and cell motility protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 73.973 73.181 2 0.011855 90587 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 61.962 57.945 72548000 0 45375000 0 0 3478300 5322500 0 4624600 0 8492400 0 0 0 5255300 0 13832 3895 12593 116120;116121;116122;116123;116124;116125;116126 92788;92789;92790;92791 92789 4 EPSVEEK Unmodified 816.38651 0.38651317 3102 Q7Z4V5 HDGFRP2 Hepatoma-derived growth factor-related protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 9.3097 6.0549 2 0.038776 8674 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.784 48.046 18911000 0 18911000 0 0 0 0 0 0 0 0 0 0 0 0 0 13833 3102 12594 116127 92792 92792 1 EPSVQEATSTSDILK Unmodified 1603.7941 0.79409613 3279 Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 61.6 61.7 2 3.8898E-23 70095 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 122.34 105.43 373200000 0 0 0 20489000 22506000 26072000 33772000 27720000 23238000 28593000 45561000 49724000 29429000 26607000 39487000 13834 3279 12595 116128;116129;116130;116131;116132;116133;116134;116135;116136;116137;116138;116139;116140 92793;92794;92795;92796;92797;92798;92799;92800;92801;92802;92803;92804;92805;92806;92807 92799 15 EPTHCEANPDLIFEDMEVMTDFELHVLCK Unmodified 3518.5502 0.55024909 4402 Q9H4L7 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 yes yes 0 0 0 By MS/MS 2 0 1 1 102.65 94.52 4 2.1453E-11 121582 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.207 64.877 16814000 16814000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13835 4402 12596 116141 92808;92809 92809 2 EPTMVAPR Unmodified 899.45349 0.4534873 2646 Q27J81 INF2 Inverted formin-2 yes yes 0 0 0 By MS/MS 10 0 1 1 29.338 29.492 2 0.02509 31945 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 58.981 39.345 19182000 0 0 0 0 0 0 0 0 0 19182000 0 0 0 0 0 13836 2646 12597 116142 92810 92810 1 EPTPIQR Unmodified 839.45012 0.45011648 4168 Q9BUQ8 DDX23 Probable ATP-dependent RNA helicase DDX23 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 17.184 17.604 2 0.027168 16752 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.748 33.138 40950000 0 0 0 0 0 0 0 0 0 0 0 0 0 16112000 24839000 13837 4168 12598 116143;116144 92811;92812 92811 2 EPTPSIASDISLPIATQELR Unmodified 2137.1267 0.12666366 4 A0FGR8 ESYT2 Extended synaptotagmin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 90.539 90.684 2 0.024857 105366 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 38.189 23.931 7168500 0 0 0 0 0 0 0 0 0 2039200 1572200 1565400 0 0 1991800 13838 4 12599 116145;116146;116147;116148 92813;92814 92814 2 EPTSSEQGGLEGSGSAAGEGK Unmodified 1933.8501 0.85010746 2100 Q04323 UBXN1 UBX domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 24.213 24.547 2 2.0716E-53 24914 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 147.12 141.8 60421000 0 0 0 0 0 6173500 4443600 0 0 4320100 6260400 7887300 3599700 7016400 20720000 13839 2100 12600 116149;116150;116151;116152;116153;116154;116155;116156 92815;92816;92817;92818;92819;92820;92821;92822;92823 92818 9 EPTSSEQGGLEGSGSAAGEGKPALSEEERQEQTK Unmodified 3459.5874 0.58735742 2100 Q04323 UBXN1 UBX domain-containing protein 1 yes yes 0 0 2 By MS/MS By MS/MS By matching 10 0 3 1 1 1 39.658 40.16 4 0.0017651 44149 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 25.08 23.032 34688000 0 0 0 0 0 0 0 0 0 0 10220000 15060000 0 9408300 0 13840 2100 12601 116157;116158;116159 92824 92824 0 EPVDEDLYPEHYRK Unmodified 1788.8319 0.83187862 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 52.2 46.211 3 0.030874 58199 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 31.656 27.34 9677800 4723600 0 4954200 0 0 0 0 0 0 0 0 0 0 0 0 13841 1201 12602 116160;116161 92825;92826 92826 1 EPVDFEQWIEK Unmodified 1418.6718 0.67179615 5220 Q9Y547 HSPB11 Intraflagellar transport protein 25 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.73 3.91 5 1 5 1 4 1 1 1 1 1 1 86.539 84.208 2 7.7266E-17 104399 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 179 150.61 1384200000 98109000 1219800000 17400000 5401700 0 0 0 0 0 0 4180600 4143100 0 3550200 31662000 13842 5220 12603 116162;116163;116164;116165;116166;116167;116168;116169;116170;116171;116172 92827;92828;92829;92830;92831;92832;92833;92834;92835;92836 92827 10 EPVEAAPAAEPVPAST Unmodified 1534.7515 0.75150304 2630 Q16740 CLPP ATP-dependent Clp protease proteolytic subunit, mitochondrial yes yes 0 0 0 By MS/MS 1 0 1 1 100.08 105.34 2 0.021107 84585 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 41.399 34.74 17830000 17830000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13843 2630 12604 116173 92837 92837 1 EPVETAVDNNSK Unmodified 1301.6099 0.60992418 2875 Q6FI81 CIAPIN1 Anamorsin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 7.88 3.69 2 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 27.658 27.854 2 2.0688E-27 92769 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 185.6 153.66 355070000 79848000 0 0 12688000 10452000 39533000 19528000 14718000 9052900 30270000 34115000 26057000 18477000 23657000 36675000 13844 2875 12605 116174;116175;116176;116177;116178;116179;116180;116181;116182;116183;116184;116185;116186;116187;116188;116189 92838;92839;92840;92841;92842;92843;92844;92845;92846;92847;92848;92849;92850;92851;92852 92843 15 EPVFSAEEGYVK Unmodified 1353.6452 0.64524705 152 O00423 EML1 Echinoderm microtubule-associated protein-like 1 yes yes 0 0 0 By MS/MS 2 0 1 1 66.381 60.464 2 6.6564E-05 77141 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.75 83.275 33636000 0 33636000 0 0 0 0 0 0 0 0 0 0 0 0 0 13845 152 12606 116190 92853 92853 1 EPVGDDESVPENVLSFDDLTADALANLK Unmodified 2972.4139 0.41385672 1580 P49591 SARS Serine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 99.987 94.569 3 1.2587E-137 118579 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 156.88 146.9 194360000 57643000 136720000 0 0 0 0 0 0 0 0 0 0 0 0 0 13846 1580 12607 116191;116192;116193 92854;92855;92856 92856 3 EPVLFVSGSADEMCEK Oxidation (M) 1812.791 0.79100137 2742 Q5JUR7 TEX30 Testis-expressed sequence 30 protein yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 70.159 64.934 2 3.6033E-23 82692 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.39 113.88 19018000 0 19018000 0 0 0 0 0 0 0 0 0 0 0 0 0 13847 2742 12608 116194;116195 92857 92857 4382 1 EPVPQPLPSDDTR Unmodified 1449.71 0.70997257 312 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 48.26 48.37 2 0.00075346 54373 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 71.03 59.299 118840000 0 0 0 9129700 7018400 9546800 10328000 7181100 11533000 11314000 15920000 17701000 9703900 9466700 0 13848 312 12609 116196;116197;116198;116199;116200;116201;116202;116203;116204;116205;116206 92858;92859;92860;92861;92862;92863;92864 92861 7 EPVPSALPPSLIPPSK Unmodified 1627.9185 0.91850879 4836 Q9UBC2 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 82.644 81.747 2 0.0023712 101296 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.233 74.207 91770000 0 77084000 0 1127600 1454500 2123600 1787100 2748000 0 0 0 3640800 1804300 0 0 13849 4836 12610 116207;116208;116209;116210;116211;116212;116213;116214;116215 92865;92866;92867;92868 92866 3 EPVPVPVQEIEIDSTTELDGHQEVEK Unmodified 2916.424 0.42402747 3225 Q8IVD9 NUDCD3 NudC domain-containing protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 88.87 84.202 3 1.3199E-126 105832 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 163.72 154.13 79135000 12677000 53901000 12557000 0 0 0 0 0 0 0 0 0 0 0 0 13850 3225 12611 116216;116217;116218;116219 92869;92870;92871;92872 92869 4 EPVSLEEWTK Unmodified 1216.5976 0.59756858 3485 Q8TC07 TBC1D15 TBC1 domain family member 15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.741 68.821 2 0.0040176 78812 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 74.376 59.116 78480000 0 0 0 3524000 3605100 6906600 5222300 5135200 4937800 9309800 6097100 6922100 6179800 6983500 13657000 13851 3485 12612 116220;116221;116222;116223;116224;116225;116226;116227;116228;116229;116230;116231 92873;92874;92875;92876;92877;92878;92879;92880;92881;92882 92881 10 EPVSLPGIMR Oxidation (M) 1113.5852 0.58522975 3573 Q8WWI1 LMO7 LIM domain only protein 7 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 63.176 63.254 2 0.010343 72180 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 49.96 20.811 126480000 0 0 0 13471000 11224000 12759000 14255000 2766400 10064000 13769000 14350000 17028000 0 0 16798000 13852 3573 12613 116232;116233;116234;116235;116236;116237;116238;116239;116240;116241 92883;92884;92885 92884 5063 1 EPVYLSGYGVELAIK Unmodified 1636.8712 0.87122424 4751 Q9NYU2 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes yes 0 0 0 By MS/MS 2 0 1 1 91.857 83.727 2 0.0017818 108553 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.953 50.285 14331000 14331000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13853 4751 12614 116242 92886 92886 1 EPVYSLDFQHGTAGR Unmodified 1675.7954 0.79543354 2235 Q13112 CHAF1B Chromatin assembly factor 1 subunit B yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 61.789 61.959 3 0.018896 70861 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 30.739 27.131 35965000 0 0 0 1686700 0 0 2642500 3591700 2185200 5002300 4347700 4936100 0 2075000 9497400 13854 2235 12615 116243;116244;116245;116246;116247;116248;116249;116250;116251 92887;92888 92887 1 EPYMEGVNPFIK Oxidation (M) 1438.6803 0.68025235 1116 P20936 RASA1 Ras GTPase-activating protein 1 yes yes 0 1 0 By MS/MS 2 0 1 1 75.535 70.595 2 0.00080074 88399 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.263 77.171 33588000 0 33588000 0 0 0 0 0 0 0 0 0 0 0 0 0 13855 1116 12616 116252 92889 92889 1606 1 EQAALSQANGIK Unmodified 1228.6412 0.64116473 646 O95361;Q309B1 TRIM16;TRIM16L Tripartite motif-containing protein 16;Tripartite motif-containing protein 16-like protein yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 32.463 32.033 2 1.8528E-05 40251 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.02 59.577 60324000 0 35604000 0 0 0 3211100 0 3672100 0 4177300 3972100 6405200 3282200 0 0 13856 646 12617 116253;116254;116255;116256;116257;116258;116259;116260 92890;92891;92892;92893;92894;92895;92896;92897 92892 7 EQAAQLR Unmodified 814.42972 0.42971539 1425 P40938 RFC3 Replication factor C subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 9.7879 9.8457 2 0.025274 8414 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 81.1 19.977 36021000 0 0 0 5133100 4563100 6296500 1081900 6724200 3981400 0 0 0 5039600 3201600 0 13857 1425 12618 116261;116262;116263;116264;116265;116266;116267;116268 92898 92898 1 EQADFALEALAK Unmodified 1304.6612 0.66123147 3090 Q7Z406 MYH14 Myosin-14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.31 3.71 7 2 17 3 4 2 1 2 2 1 1 1 1 2 1 2 1 2 78.843 78.096 2 8.2966E-06 90347 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 109.42 0 4344100000 6392200 2271800000 57583000 59059000 140560000 180190000 114170000 129710000 132200000 235920000 228590000 235250000 157810000 151620000 243310000 13858 3090 12619 116269;116270;116271;116272;116273;116274;116275;116276;116277;116278;116279;116280;116281;116282;116283;116284;116285;116286;116287;116288;116289;116290;116291;116292;116293;116294 92899;92900;92901;92902;92903;92904;92905;92906;92907;92908;92909;92910;92911;92912;92913;92914;92915;92916;92917;92918;92919;92920;92921;92922;92923;92924;92925;92926;92927;92928 92918 29 EQAELEAAR Unmodified 1015.4934 0.49343786 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 19.795 19.988 2 0.02342 19563 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 51.066 30.546 37296000 0 0 0 0 1496100 7303300 2885900 0 6113100 3804000 0 2256200 0 10431000 3006400 13859 2501 12620 116295;116296;116297;116298;116299;116300;116301;116302 92929;92930 92930 2 EQAEQWLK Unmodified 1030.5084 0.50835964 3339 Q8N556 AFAP1 Actin filament-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 44.09 44.393 2 0.006821 48737 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 95.352 61.264 49020000 0 0 0 0 0 8462100 0 0 0 9443300 0 0 0 9791700 21323000 13860 3339 12621 116303;116304;116305;116306;116307;116308;116309 92931;92932;92933;92934;92935;92936;92937 92935 7 EQAIGEYEDLRAENQK Unmodified 1891.8912 0.89118442 6 A0MZ66 KIAA1598 Shootin-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48.908 47.909 3 3.2612E-18 64453 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 114.69 103.75 216680000 11637000 17883000 5724000 8680500 8842200 12627000 10628000 8897200 5080700 19017000 25618000 16522000 13328000 16478000 35717000 13861 6 12622 116310;116311;116312;116313;116314;116315;116316;116317;116318;116319;116320;116321;116322;116323;116324 92938;92939;92940;92941;92942;92943;92944;92945;92946;92947;92948 92943 8 EQALADLNSVEK Unmodified 1315.662 0.66195975 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 58.845 53.002 2 2.9269E-05 68171 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 133.44 93.09 98221000 0 98221000 0 0 0 0 0 0 0 0 0 0 0 0 0 13862 645 12623 116325;116326 92949;92950;92951 92950 3 EQALAVSR Unmodified 872.47158 0.4715802 1121 P21281 ATP6V1B2 V-type proton ATPase subunit B, brain isoform yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.924 22.13 2 0.016048 22940 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 67.897 20.815 196850000 0 0 0 15390000 8954000 15921000 16714000 11471000 10050000 18164000 22147000 21816000 16255000 17121000 22847000 13863 1121 12624 116327;116328;116329;116330;116331;116332;116333;116334;116335;116336;116337;116338 92952;92953;92954;92955;92956;92957 92953 6 EQALQDLQQQR Unmodified 1355.6793 0.67934115 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 39.639 39.394 2 1.4476E-05 42958 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 135.71 108.6 89741000 0 24761000 0 0 0 4580200 0 4072600 0 5983600 9516400 7836800 3951900 7596000 21443000 13864 2495 12625 116339;116340;116341;116342;116343;116344;116345;116346;116347;116348;116349 92958;92959;92960;92961;92962;92963;92964;92965;92966;92967;92968;92969 92962 12 EQALQEAMEQLEQLELERK Unmodified 2314.1475 0.14747546 4890 Q9UH65 SWAP70 Switch-associated protein 70 yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 2 2 3 1 97.5 91.74 3;4 4.1331E-31 115982 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 120.31 112.86 86906000 81062000 5843700 0 0 0 0 0 0 0 0 0 0 0 0 0 13865 4890 12626 116350;116351;116352;116353 92970;92971;92972;92973 92972 3 EQALREVEHLK Unmodified 1350.7256 0.72556306 5288 Q9Y6K9 IKBKG NF-kappa-B essential modulator yes yes 0 0 1 By MS/MS By MS/MS 1.67 0.471 1 2 2 1 65.373 63.616 3 0.0048922 95647 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 68.069 45.383 58922000 48625000 0 10297000 0 0 0 0 0 0 0 0 0 0 0 0 13866 5288 12627 116354;116355;116356 92974;92975 92974 2 EQANAVSEAVVSSVNTVATK Unmodified 2003.0171 0.017113212 574 O76070 SNCG Gamma-synuclein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.68 3.62 2 5 3 24 4 5 1 2 2 2 2 2 2 2 2 2 2 2 2 80.544 79.629 2;3 0 89790 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 342.28 331.37 9657100000 137860000 3324400000 10465000 212380000 403680000 371850000 448910000 343450000 300330000 445000000 651240000 864040000 333020000 544990000 1265500000 13867 574 12628 116357;116358;116359;116360;116361;116362;116363;116364;116365;116366;116367;116368;116369;116370;116371;116372;116373;116374;116375;116376;116377;116378;116379;116380;116381;116382;116383;116384;116385;116386;116387;116388;116389;116390 92976;92977;92978;92979;92980;92981;92982;92983;92984;92985;92986;92987;92988;92989;92990;92991;92992;92993;92994;92995;92996;92997;92998;92999;93000;93001 92985 21 EQAQQAGLDDEVPHGQESDLFSETSSVVSGSEMSGK Oxidation (M) 3780.6545 0.65445071 624 O95163 IKBKAP Elongator complex protein 1 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 82.02 78.017 3 2.8839E-61 96984 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.893 96.197 57074000 0 57074000 0 0 0 0 0 0 0 0 0 0 0 0 0 13868 624 12629 116391;116392 93002;93003 93002 764 2 EQAQQAGLDDEVPHGQESDLFSETSSVVSGSEMSGK Unmodified 3764.6595 0.65953609 624 O95163 IKBKAP Elongator complex protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 85.075 80.331 3 1.3527E-11 99861 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 50.611 45.897 60351000 0 60351000 0 0 0 0 0 0 0 0 0 0 0 0 0 13869 624 12629 116393 93004 93004 1 EQAQQEEQRER Unmodified 1429.6546 0.65458296 1090 P19484 TFEB Transcription factor EB yes yes 0 0 1 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 5.6353 5.8014 3 0.00441 3697 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 45.433 38.068 50702000 0 0 0 6897300 0 0 0 4136400 6813900 4164100 5694900 5938500 6226700 4584800 6245900 13870 1090 12630 116394;116395;116396;116397;116398;116399;116400;116401;116402 93005 93005 1 EQASASGAQK Unmodified 975.46214 0.46213773 2074 Q02383 SEMG2 Semenogelin-2 yes yes 0 0 0 By MS/MS 10 0 1 1 17.604 18.159 2 0.025912 17386 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.447 9.6393 4909300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4909300 13871 2074 12631 116403 93006 93006 1 EQAVIPLTDSEYK Unmodified 1491.7457 0.74568938 2879 Q6GQQ9 OTUD7B OTU domain-containing protein 7B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 67.337 66.672 2 4.358E-06 83930 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.33 81.949 132390000 0 49845000 0 5571900 4387100 7165100 5241800 6077800 3683300 7953000 9249100 6965100 5851300 4891700 15508000 13872 2879 12632 116404;116405;116406;116407;116408;116409;116410;116411;116412;116413;116414;116415;116416;116417 93007;93008;93009;93010;93011;93012;93013;93014;93015;93016;93017;93018;93019 93010 12 EQCAEENIPASSLNK Unmodified 1688.7676 0.76756381 4982 Q9UL03 INTS6 Integrator complex subunit 6 yes yes 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.531 42.707 2 6.3751E-28 47530 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 138.89 125.23 115890000 0 0 0 4352400 6715600 8326400 6449900 7990900 13589000 10058000 9492100 17179000 9243500 8203500 14293000 13873 4982 12633 116418;116419;116420;116421;116422;116423;116424;116425;116426;116427;116428;116429 93020;93021;93022 93020 3 EQCENLQQEK Unmodified 1304.5667 0.56667916 3242 Q8IWJ2 GCC2 GRIP and coiled-coil domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 12.229 12.439 2 0.0015301 11266 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 105.52 95.815 14119000 0 0 0 0 0 1401500 1118500 932850 756180 1638400 1691500 2331600 0 1041900 3206300 13874 3242 12634 116430;116431;116432;116433;116434;116435;116436;116437;116438 93023 93023 1 EQCTLLTSEK Unmodified 1207.5755 0.57545293 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By MS/MS 10 0 1 1 35.049 35.385 2 0.041481 39025 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 54.608 30.578 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13875 2291 12635 116439 93024 93024 1 EQDAVDQVK Unmodified 1030.4931 0.49310351 2370 Q14134 TRIM29 Tripartite motif-containing protein 29 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 15.128 15.405 2 0.011037 15129 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 63.419 23.756 42899000 0 0 0 0 3482900 0 0 0 0 5300400 6703200 9123900 9647300 0 8641800 13876 2370 12636 116440;116441;116442;116443;116444;116445 93025 93025 1 EQDDGILQIQK Unmodified 1285.6514 0.65139506 4292 Q9C0I1 MTMR12 Myotubularin-related protein 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 53.674 54.003 2 0.010435 61484 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 49.536 26.755 17260000 0 0 0 0 0 4573800 0 0 0 0 0 0 6304300 0 6381700 13877 4292 12637 116446;116447;116448;116449 93026;93027 93026 2 EQDDLLVLLADQDQK Unmodified 1741.8734 0.87340909 430 O60763 USO1 General vesicular transport factor p115 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.47 3.59 3 2 10 2 2 1 1 1 1 1 1 1 1 1 1 1 90.788 89.294 2;3 3.67E-28 103907 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 141.38 128.43 134620000 23205000 81682000 0 936700 2168500 3810300 1787300 0 2289600 0 0 5399600 2369300 3155100 7822000 13878 430 12638 116450;116451;116452;116453;116454;116455;116456;116457;116458;116459;116460;116461;116462;116463;116464 93028;93029;93030;93031;93032;93033;93034;93035;93036;93037;93038;93039;93040;93041;93042;93043;93044;93045;93046;93047 93034 19 EQDFFFELDAMDHLQSFIADCDRRTEVAK Unmodified 3532.6028 0.60275367 5141 Q9Y383 LUC7L2 Putative RNA-binding protein Luc7-like 2 yes yes 0 0 2 By MS/MS 2 0 1 1 99.273 91.143 5 2.9087E-35 117528 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.691 95.924 24076000 24076000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13879 5141 12639 116465 93048 93048 1 EQDHIIIIPR Unmodified 1232.6877 0.68772099 4874 Q9UEY8 ADD3 Gamma-adducin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 60.521 60.349 3 0.0044432 68542 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 52.579 41.046 95688000 0 0 47307000 0 0 3132600 0 6016600 0 7282100 6783000 5769700 4877100 4225500 10295000 13880 4874 12640 116466;116467;116468;116469;116470;116471;116472;116473;116474 93049;93050;93051;93052;93053;93054;93055;93056;93057 93051 9 EQDHLVEEVAR Unmodified 1323.6419 0.64189301 3098 Q7Z4H7 HAUS6 HAUS augmin-like complex subunit 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 15 1 1 1 2 1 1 2 1 1 1 2 1 37.026 37.205 2;3 0.0043867 41042 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 55.401 40.525 112490000 0 0 0 5564300 6216800 9167700 9013700 6818500 6094200 11966000 8672400 15948000 9069600 11604000 12353000 13881 3098 12641 116475;116476;116477;116478;116479;116480;116481;116482;116483;116484;116485;116486;116487;116488;116489 93058;93059;93060;93061;93062;93063;93064;93065 93059 8 EQDKPPNLVLK Unmodified 1279.7136 0.71360139 3537 Q8WUA2 PPIL4 Peptidyl-prolyl cis-trans isomerase-like 4 yes yes 0 0 1 By MS/MS 3 0 1 1 50.606 45.71 3 0.011156 56542 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 43.297 29.896 42237000 0 42237000 0 0 0 0 0 0 0 0 0 0 0 0 0 13882 3537 12642 116490 93066 93066 1 EQDLPLAEAVRPK Unmodified 1464.7936 0.79364262 3732 Q96A49 SYAP1 Synapse-associated protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 61.697 61.999 3 0.0092542 70975 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 41.227 34.188 63376000 0 0 0 0 0 0 0 0 0 14329000 0 0 18530000 0 30517000 13883 3732 12643 116491;116492;116493 93067 93067 1 EQDQRPLHPVANPHAEISTK Unmodified 2266.1454 0.14544204 4718 Q9NX58 LYAR Cell growth-regulating nucleolar protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.24 2.35 2 19 1 1 2 1 1 2 2 2 1 1 2 2 2 1 35.019 34.693 4;5 5.785E-07 49705 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.454 53.394 241080000 82783000 0 4668600 7037700 2424700 11521000 7200700 9862300 12087000 8234300 11193000 41010000 21047000 13688000 8324800 13884 4718 12644 116494;116495;116496;116497;116498;116499;116500;116501;116502;116503;116504;116505;116506;116507;116508;116509;116510;116511;116512;116513;116514 93068;93069;93070;93071;93072;93073;93074 93069 4 EQDRLLQEK Unmodified 1157.6041 0.60405094 3573 Q8WWI1 LMO7 LIM domain only protein 7 yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.279 20.481 3 0.0059085 20945 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 57.267 18.514 285800000 0 0 0 20396000 31450000 21549000 25261000 17236000 18109000 20189000 22516000 32597000 20315000 21456000 34730000 13885 3573 12645 116515;116516;116517;116518;116519;116520;116521;116522;116523;116524;116525;116526 93075 93075 1 EQDSESQTLDK Unmodified 1278.5576 0.55755426 2447 Q14790 CASP8 Caspase-8;Caspase-8 subunit p18;Caspase-8 subunit p10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 11.472 11.651 2 0.0032777 10792 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 64.297 51.67 13853000 0 0 0 939950 0 2357000 0 0 0 2196900 1266400 0 1418900 1790700 3883400 13886 2447 12646 116527;116528;116529;116530;116531;116532;116533 93076;93077;93078 93076 3 EQDSEVSEDTK Unmodified 1265.5259 0.52591978 3687 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.83 1 8 1 1 1 1 1 1 1 1 1 19.251 20.008 2 0.00013158 6177 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 109.66 92.888 67045000 21740000 0 0 0 2500100 0 0 0 4344000 4380500 11029000 5260200 6845600 4416500 6529800 13887 3687 12647 116534;116535;116536;116537;116538;116539;116540;116541;116542 93079;93080;93081;93082;93083;93084;93085;93086;93087 93083 9 EQDVEVLEPLK Unmodified 1297.6765 0.67654718 2195 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 67.844 68.291 2 0.03444 77624 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.73 22.47 18882000 0 0 0 0 0 0 0 0 0 0 0 7252300 0 0 11629000 13888 2195 12648 116543;116544 93088 93088 1 EQDYLCHVYVR Unmodified 1480.6769 0.67689831 288 O15498 YKT6 Synaptobrevin homolog YKT6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.766 55.892 3 0.021038 63286 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 52.79 50.155 139950000 0 0 0 7560000 3838800 17094000 8358200 10472000 7281500 14336000 15654000 12362000 9822300 11060000 22114000 13889 288 12649 116545;116546;116547;116548;116549;116550;116551;116552;116553;116554;116555;116556 93089 93089 0 EQEAAMEIQEPAANK Oxidation (M) 1673.7567 0.75666477 3631 Q92576 PHF3 PHD finger protein 3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 31.698 32.083 2 5.2058E-27 34546 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 129.82 119.87 46227000 0 0 0 0 0 4504300 0 0 0 7794100 7515400 11787000 6141100 3765900 4718900 13890 3631 12650 116557;116558;116559;116560;116561;116562;116563;116564;116565;116566 93090;93091;93092;93093;93094;93095;93096;93097;93098;93099;93100 93098 5126 10 EQEAAMEIQEPAANK Unmodified 1657.7618 0.76175015 3631 Q92576 PHF3 PHD finger protein 3 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 44.397 44.944 2 9.3938E-27 49969 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 156.14 154 30419000 0 0 0 0 0 0 0 0 4256600 0 0 11099000 0 0 15063000 13891 3631 12650 116567;116568;116569;116570;116571;116572 93101;93102;93103;93104;93105 93105 5 EQEAEAYRQK Unmodified 1250.5891 0.58912916 2129 Q06547 GABPB1 GA-binding protein subunit beta-1 yes yes 0 0 1 By MS/MS 2.5 0.5 2 2 4 9.4209 6.1123 2;3 0.0004871 8831 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.52 109.25 28042000 0 28042000 0 0 0 0 0 0 0 0 0 0 0 0 0 13892 2129 12651 116573;116574;116575;116576 93106;93107;93108 93107 3 EQEAEPEEQEEDSSSDPR Unmodified 2089.8196 0.8195952 1756 P55081 MFAP1 Microfibrillar-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 2 2 1 2 1 1 1 1 1 2 2 20.749 20.897 2;3 2.3169E-53 21720 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 159.08 157.1 112930000 0 0 0 11062000 14714000 8521600 13556000 4769400 4812200 8141200 7947800 0 10967000 17402000 11036000 13893 1756 12652 116577;116578;116579;116580;116581;116582;116583;116584;116585;116586;116587;116588;116589;116590;116591;116592 93109;93110;93111;93112;93113;93114;93115;93116;93117;93118;93119;93120;93121;93122 93112 14 EQEAGLLQFLR Unmodified 1302.6932 0.6932003 4771 Q9NZL4 HSPBP1 Hsp70-binding protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 88.436 88.586 2 0.023652 102584 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.233 47.674 15279000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15279000 13894 4771 12653 116593 93123 93123 0 EQEAQFEK Unmodified 1007.456 0.45598972 426 O60716 CTNND1 Catenin delta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 15.137 15.121 2 0.019608 14648 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 63.48 25.158 10377000 0 0 0 0 3717200 0 0 0 0 6660100 0 0 0 0 0 13895 426 12654 116594;116595;116596 93124;93125 93124 2 EQEDLPLYQHQATR Unmodified 1726.8275 0.82746195 3466 Q8NI35 INADL InaD-like protein yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 45.675 45.98 3 0.045292 50613 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 27.263 17.191 57135000 0 0 0 0 0 0 10029000 4409900 0 8857200 4927100 0 0 2495800 26415000 13896 3466 12655 116597;116598;116599;116600;116601;116602 93126 93126 1 EQEEAAAPR Unmodified 999.46214 0.46213773 3284 Q8IYI6 EXOC8 Exocyst complex component 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 8.4275 8.4371 2 0.042904 6857 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 43.808 27.032 3789300 0 0 0 0 918590 1130900 0 0 0 0 0 0 1739800 0 0 13897 3284 12656 116603;116604;116605;116606 93127;93128 93127 2 EQEEEREAIR Unmodified 1287.6055 0.6055075 5037 Q9UNN5 FAF1 FAS-associated factor 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 12.016 12.16 3 0.0034868 11019 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 69.979 52.954 130170000 0 0 0 10674000 8230100 0 15655000 8186400 7862100 20482000 11230000 15861000 16126000 15860000 0 13898 5037 12657 116607;116608;116609;116610;116611;116612;116613;116614;116615;116616 93129;93130;93131;93132;93133;93134;93135;93136;93137;93138 93136 4 EQEEEREAIRLSLEQALPPEPK Unmodified 2590.3239 0.32385992 5037 Q9UNN5 FAF1 FAS-associated factor 1 yes yes 0 0 2 By MS/MS 2 0 1 1 84.178 76.047 4 0.0026614 99199 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 35.174 26.952 37218000 37218000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13899 5037 12658 116617 93139 93139 1 EQEELER Unmodified 931.42469 0.42468959 2398 Q14244 MAP7 Ensconsin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 11.635 11.701 2 0.04888 10714 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 64.757 6.5901 17965000 0 0 0 0 0 4564600 5214600 3904300 0 4281500 0 0 0 0 0 13900 2398 12659 116618;116619;116620;116621 93140 93140 1 EQEELNDAVGFSR Unmodified 1492.6794 0.67940073 662 O95453 PARN Poly(A)-specific ribonuclease PARN yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.712 55.838 2 0.00059691 62428 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 76.533 50.415 79910000 0 0 0 3760400 4019900 5271200 5201000 5153600 3788500 8750800 10328000 10699000 6692100 5548000 10697000 13901 662 12660 116622;116623;116624;116625;116626;116627;116628;116629;116630;116631;116632;116633 93141;93142;93143;93144;93145;93146;93147;93148;93149;93150 93146 10 EQEETIQR Unmodified 1031.4884 0.48835248 2251 Q13190 STX5 Syntaxin-5 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 11.353 11.498 2 0.0068357 10509 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 94.662 57.642 22524000 0 0 0 0 1040900 1675200 2155300 1575600 1355500 2478900 0 3240000 3368300 2094600 3539600 13902 2251 12661 116634;116635;116636;116637;116638;116639;116640;116641;116642;116643 93151;93152;93153;93154;93155;93156;93157 93156 7 EQEETIQRIDENVLGAQLDVEAAHSEILK Unmodified 3276.6474 0.6473789 2251 Q13190 STX5 Syntaxin-5 yes yes 0 0 1 By MS/MS 2 0 1 1 92.953 84.822 4 2.5176E-06 109928 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.612 38.244 9237800 9237800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13903 2251 12662 116644 93158;93159 93159 2 EQEFPVEPVGEK Unmodified 1386.6667 0.66671078 455 O75116 ROCK2 Rho-associated protein kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 57.885 57.076 2 2.865E-05 64413 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 97.472 75.621 95809000 9880300 0 0 0 5768200 12299000 8217200 7908800 0 10169000 0 0 14770000 12203000 14594000 13904 455 12663 116645;116646;116647;116648;116649;116650;116651;116652;116653 93160;93161;93162;93163;93164;93165;93166;93167 93165 8 EQEGTPSASTK Unmodified 1133.52 0.52004654 3588 Q8WXE0 CASKIN2 Caskin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.9788 7.1025 2 0.028001 5084 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 39.622 8.3931 20838000 0 0 0 1391000 1059400 2024600 1884700 1732500 2187700 1333200 2686200 825880 1708800 1658500 2345400 13905 3588 12664 116654;116655;116656;116657;116658;116659;116660;116661;116662;116663;116664;116665 93168 93168 1 EQEILQLER Unmodified 1156.6088 0.60880197 3665 Q92805 GOLGA1 Golgin subfamily A member 1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 58.184 58.373 2 0.013925 65596 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 67.897 36.367 50222000 0 0 0 0 2939400 3676300 2707200 2776300 0 4451900 6147100 8340900 6138700 5576700 7467400 13906 3665 12665 116666;116667;116668;116669;116670;116671;116672;116673;116674;116675 93169;93170;93171;93172 93170 4 EQEIVASSPSLSGLK Unmodified 1543.8094 0.80935227 1583 P49643 PRIM2 DNA primase large subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 66.602 66.674 2 7.9163E-10 75708 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 115.14 93.143 52275000 0 0 0 3354100 4263500 5339000 0 2760300 0 4124300 5563600 7101600 7262100 4376200 8130100 13907 1583 12666 116676;116677;116678;116679;116680;116681;116682;116683;116684;116685;116686 93173;93174;93175;93176;93177;93178;93179;93180;93181;93182;93183 93175 11 EQELEQLTK Unmodified 1116.5663 0.56626845 3459 Q8NHQ8 RASSF8 Ras association domain-containing protein 8 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 39.62 39.979 2 0.0098768 43471 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 65.465 42.037 11713000 0 0 0 0 0 0 2039400 0 0 0 0 0 3057900 2363600 4251900 13908 3459 12667 116687;116688;116689;116690 93184;93185 93185 2 EQELNQSISEK Unmodified 1303.6256 0.62557424 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.352 27.55 2 7.5041E-06 29406 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 163.88 143.88 436030000 0 0 0 17895000 27553000 35336000 32739000 35097000 28768000 34956000 44496000 59700000 44716000 27442000 47331000 13909 2556 12668 116691;116692;116693;116694;116695;116696;116697;116698;116699;116700;116701;116702 93186;93187;93188;93189;93190;93191;93192;93193;93194;93195;93196;93197;93198 93195 13 EQELSEEDK Unmodified 1105.4775 0.47751302 2252 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.22 3.94 2 4 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 22.436 22.163 2 4.2213E-06 92747 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 172.21 128.48 575990000 160920000 90642000 1575300 20582000 17862000 28111000 10933000 9237600 12035000 41818000 40509000 67034000 15724000 19531000 39479000 13910 2252 12669 116703;116704;116705;116706;116707;116708;116709;116710;116711;116712;116713;116714;116715;116716;116717;116718;116719;116720 93199;93200;93201;93202;93203;93204;93205;93206;93207;93208;93209;93210;93211;93212;93213;93214;93215;93216;93217;93218;93219;93220 93209 21 EQEMMQEK Oxidation (M) 1067.4263 0.42634585 5325 yes yes 0 1 0 By MS/MS 10 0 1 1 21.794 21.781 2 0.017847 22788 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 57.559 32.636 + 3750200 0 0 0 0 0 0 3750200 0 0 0 0 0 0 0 0 13911 5325 12670 116721 93221 93221 6721;6722 1 EQEMQECTTQIQYLK Unmodified 1927.8656 0.86556329 2470 Q15007 WTAP Pre-mRNA-splicing regulator WTAP yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 61.872 61.946 2 8.7541E-23 70701 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 145.55 131.32 34713000 0 0 0 2381300 2374500 0 2490600 2332400 0 5572900 0 4912800 4102800 3082500 7463200 13912 2470 12671 116722;116723;116724;116725;116726;116727;116728;116729;116730;116731 93222;93223;93224;93225;93226;93227;93228;93229;93230 93229 9 EQEMQECTTQIQYLK Oxidation (M) 1943.8605 0.86047792 2470 Q15007 WTAP Pre-mRNA-splicing regulator WTAP yes yes 0 1 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching 10 0 8 1 1 1 1 1 1 1 1 52.196 52.531 2 8.0742E-06 59602 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 79.741 73.508 39198000 0 0 0 0 0 0 4070900 0 2615300 4539300 4572000 5364000 4613300 3397900 10025000 13913 2470 12671 116732;116733;116734;116735;116736;116737;116738;116739 93231 93231 4066 1 EQEPIGTDLDAVRTPEPLEEFPK Unmodified 2609.2861 0.28607743 917 P10244 MYBL2 Myb-related protein B yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 86.162 83.334 3 0.020154 99606 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 25.257 15.541 6322500 0 3616400 2706100 0 0 0 0 0 0 0 0 0 0 0 0 13914 917 12672 116740;116741 93232;93233 93232 2 EQEPMPTVDSHEPR Oxidation (M) 1666.7257 0.72569899 4460 Q9H910 HN1L Hematological and neurological expressed 1-like protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.45 1 6 1 1 1 1 1 1 1 25.706 25.203 3 0.0013403 25774 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.925 32.543 67392000 0 7969900 0 8175700 3838500 0 0 6474800 0 4650900 0 0 0 11566000 24717000 13915 4460 12673 116742;116743;116744;116745;116746;116747;116748 93234;93235 93234 5898 1 EQEPMPTVDSHEPR Unmodified 1650.7308 0.73078437 4460 Q9H910 HN1L Hematological and neurological expressed 1-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 37.255 36.322 3 0.0037718 44238 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 56.482 56.482 138570000 0 17076000 0 4759000 4464600 0 0 0 4872500 0 0 35519000 7214400 23709000 40952000 13916 4460 12673 116749;116750;116751;116752;116753;116754;116755;116756;116757 93236;93237;93238;93239;93240 93237 4 EQEQDDSTVACR Unmodified 1436.5838 0.58378578 3061 Q7LBC6 KDM3B Lysine-specific demethylase 3B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.936 12.084 2 0.0020713 9997 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 79.148 62.477 17483000 0 0 0 1355300 1417500 929700 1491900 1655700 1247600 0 968820 2192900 1967400 1759100 2497400 13917 3061 12674 116758;116759;116760;116761;116762;116763;116764;116765;116766;116767;116768 93241;93242;93243;93244;93245;93246;93247;93248;93249 93245 9 EQEQLNVEK Unmodified 1115.5459 0.54586736 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.129 22.337 2 0.0032531 23109 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 93.162 47.827 673920000 0 0 0 31709000 37357000 49809000 37573000 38192000 39442000 62641000 77085000 106660000 77868000 48123000 67451000 13918 2556 12675 116769;116770;116771;116772;116773;116774;116775;116776;116777;116778;116779;116780 93250;93251;93252;93253;93254;93255;93256;93257;93258;93259;93260;93261;93262;93263;93264 93251 15 EQERLAYINPDLALEEK Unmodified 2030.032 0.032034995 1313 P31948 STIP1 Stress-induced-phosphoprotein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 3 2 1 81.621 76.522 2;3 1.5833E-35 96394 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.4 124.28 1893400000 711790000 1005500000 176180000 0 0 0 0 0 0 0 0 0 0 0 0 13919 1313 12676 116781;116782;116783;116784;116785;116786 93265;93266;93267;93268;93269;93270;93271 93265 5 EQETLISQK Unmodified 1074.5557 0.55570376 2453 Q14865 ARID5B AT-rich interactive domain-containing protein 5B yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 26.718 26.874 2 0.017596 29059 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 55.549 24.128 11636000 0 0 0 0 4023700 0 0 0 0 0 0 0 0 0 7611900 13920 2453 12677 116787;116788 93272;93273 93273 2 EQEVAELK Unmodified 944.48148 0.48147619 2291;1357 P35580;Q13439 MYH10;GOLGA4 Myosin-10;Golgin subfamily A member 4 no no 0 0 0 By MS/MS 10 0 1 1 24.133 24.813 2 0.036193 25784 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 87.323 8.2065 11742000 0 0 0 0 0 0 0 0 0 0 0 11742000 0 0 0 13921 1357;2291 12678 116789 93274 93274 0 EQEVNILK Unmodified 971.52876 0.52876073 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.14 42.317 2 0.016293 46574 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 111.04 37.419 346890000 0 0 0 20441000 24591000 24633000 22933000 13948000 22529000 26718000 33234000 70028000 38824000 20517000 28497000 13922 1356 12679 116790;116791;116792;116793;116794;116795;116796;116797;116798;116799;116800;116801 93275;93276 93276 0 EQEWNTTNAK Unmodified 1219.5469 0.54692999 25 A6NDU8 C5orf51 UPF0600 protein C5orf51 yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 20.476 20.051 2 0.0013489 24277 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 111.39 103.82 106110000 0 29008000 0 3406400 3088600 7332900 5096100 0 2624600 9684600 9571900 8724800 7925800 5328900 14317000 13923 25 12680 116802;116803;116804;116805;116806;116807;116808;116809;116810;116811;116812;116813;116814 93277;93278;93279;93280 93279 2 EQFASTNIAEELVK Unmodified 1577.7937 0.7937022 1685 P52306 RAP1GDS1 Rap1 GTPase-GDP dissociation stimulator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 80.96 79.985 2 3.8109E-08 91930 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 96.229 67.272 736240000 8697300 648580000 4087000 1659600 2412600 8109500 3284700 2912100 3001300 8006000 7756900 9558500 2804400 6848900 18521000 13924 1685 12681 116815;116816;116817;116818;116819;116820;116821;116822;116823;116824;116825;116826;116827;116828;116829;116830 93281;93282;93283;93284;93285;93286;93287;93288;93289;93290;93291;93292;93293;93294;93295;93296;93297;93298 93293 18 EQFDTLTPEPPVDPNQEVPPGPPR Unmodified 2655.2817 0.28166075 2961 Q6PKG0 LARP1 La-related protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.719 80.778 3 6.7583E-07 93112 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 50.426 44.199 120580000 0 0 0 4864300 8740400 8909100 9696200 8218700 8266800 12097000 10856000 12716000 10678000 9176700 16358000 13925 2961 12682 116831;116832;116833;116834;116835;116836;116837;116838;116839;116840;116841;116842 93299;93300;93301;93302;93303;93304;93305;93306;93307;93308;93309;93310;93311 93311 11 EQFGNNPFSSLAGNSDSSSSQPLR Unmodified 2525.1419 0.14187281 4609 Q9NRR5 UBQLN4 Ubiquilin-4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.547 80.608 3 6.4927E-103 93180 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 141.78 137.98 294980000 0 0 0 6669800 12459000 16559000 14752000 28857000 17800000 29776000 29922000 34856000 23309000 23017000 57007000 13926 4609 12683 116843;116844;116845;116846;116847;116848;116849;116850;116851;116852;116853;116854 93312;93313;93314;93315;93316;93317;93318;93319;93320;93321;93322;93323 93313 12 EQFHQFLEAK Unmodified 1275.6248 0.62478638 3848 Q96G46 DUS3L tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 4 1 1 2 58.264 52.813 2;3 1.0274E-05 65396 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 138.08 122.93 87875000 8108800 34846000 44920000 0 0 0 0 0 0 0 0 0 0 0 0 13927 3848 12684 116855;116856;116857;116858 93324;93325;93326;93327 93326 4 EQFLDGDGWTSR Unmodified 1409.6212 0.62115757 1225 P27797 CALR Calreticulin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.72 2.86 4 2 30 2 4 2 1 1 2 3 3 3 3 2 4 4 2 68.231 67.348 2 6.3142E-13 85206 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.89 121.67 1877500000 54439000 560430000 0 1961000 37670000 52643000 81221000 64456000 77403000 36914000 213450000 127310000 85922000 105410000 378280000 13928 1225 12685 116859;116860;116861;116862;116863;116864;116865;116866;116867;116868;116869;116870;116871;116872;116873;116874;116875;116876;116877;116878;116879;116880;116881;116882;116883;116884;116885;116886;116887;116888;116889;116890;116891;116892;116893;116894 93328;93329;93330;93331;93332;93333;93334;93335;93336;93337;93338;93339;93340;93341;93342;93343;93344;93345;93346;93347;93348;93349;93350;93351;93352;93353;93354;93355;93356;93357;93358;93359;93360;93361;93362;93363;93364 93335 35 EQFLDGDGWTSRWIESK Unmodified 2052.9541 0.95411902 1225 P27797 CALR Calreticulin yes yes 0 0 1 By MS/MS By MS/MS 2.4 0.49 3 2 3 2 88.055 82.467 3 3.4047E-54 105222 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 150.28 133.25 465920000 417620000 48292000 0 0 0 0 0 0 0 0 0 0 0 0 0 13929 1225 12686 116895;116896;116897;116898;116899 93365;93366;93367;93368;93369 93369 5 EQFNEFR Unmodified 968.43519 0.4351947 2515 Q15293 RCN1 Reticulocalbin-1 yes yes 0 0 0 By MS/MS 10 0 1 1 38.666 39.405 2 0.024271 42662 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 119.89 93.778 79938000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 79938000 13930 2515 12687 116900 93370 93370 1 EQFNEFRDLNK Unmodified 1438.6841 0.68409218 2515 Q15293 RCN1 Reticulocalbin-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 51.053 51.191 3 0.0002866 56710 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.879 55.03 470710000 0 0 0 19814000 11990000 16929000 16665000 22918000 17760000 27054000 64281000 75186000 0 63979000 134130000 13931 2515 12688 116901;116902;116903;116904;116905;116906;116907;116908;116909;116910;116911 93371;93372;93373;93374;93375;93376;93377;93378;93379;93380 93374 10 EQFSQGSPSNCLETSLAEIFPLGK Unmodified 2638.2585 0.25848247 4560 Q9NQ88 TIGAR Fructose-2,6-bisphosphatase TIGAR yes yes 0 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 3 1 99.26 95.459 3 1.4709E-24 117543 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.67 101.21 95253000 0 92611000 2642200 0 0 0 0 0 0 0 0 0 0 0 0 13932 4560 12689 116912;116913;116914;116915 93381;93382;93383;93384 93381 4 EQFVPGPNEK Unmodified 1143.556 0.55603812 405 O60502 MGEA5 Protein O-GlcNAcase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 39.085 36.798 2 0.010601 41380 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 85.676 59.737 213590000 10289000 193130000 0 0 0 0 4142400 2961400 3073800 0 0 0 0 0 0 13933 405 12690 116916;116917;116918;116919;116920;116921;116922;116923;116924;116925 93385;93386;93387;93388;93389;93390;93391;93392 93385 8 EQFWEQAK Unmodified 1064.4927 0.49270958 2621 Q16643 DBN1 Drebrin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 46.766 47.28 2 0.043235 52157 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.325 29.838 44402000 0 0 0 0 0 0 9401100 0 0 0 0 16098000 0 0 18902000 13934 2621 12691 116926;116927;116928 93393 93393 1 EQGIQDPIK Unmodified 1026.5346 0.53457439 3249 Q8IWX8 CHERP Calcium homeostasis endoplasmic reticulum protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 38.525 38.3 2 0.028187 41425 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.097 20.879 239320000 0 43814000 0 11724000 16932000 15585000 15845000 12737000 11021000 20257000 17047000 19810000 14465000 15819000 24263000 13935 3249 12692 116929;116930;116931;116932;116933;116934;116935;116936;116937;116938;116939;116940;116941 93394;93395;93396;93397 93395 4 EQGNAYYAK Unmodified 1042.472 0.47197413 4035 Q99615 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.669 13.831 2 0.011176 12810 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 63.21 50.779 98435000 0 0 0 3069700 4227200 5664800 7944900 7313100 7935300 8071800 7340100 8466200 5559500 8760800 24081000 13936 4035 12693 116942;116943;116944;116945;116946;116947;116948;116949;116950;116951;116952;116953 93398;93399;93400;93401 93400 4 EQGNIEEAVR Unmodified 1143.552 0.55201537 271 O15294 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 29.633 29.834 2 0.0052778 32417 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 69.598 44.675 37943000 0 0 0 3109900 0 2155300 4263500 2461800 2283300 3843200 4513100 6952200 5011100 3349400 0 13937 271 12694 116954;116955;116956;116957;116958;116959;116960;116961;116962;116963 93402;93403;93404;93405;93406;93407;93408;93409;93410 93406 9 EQGPYETYEGSPVSK Unmodified 1669.7471 0.74714594 1171 P23921 RRM1 Ribonucleoside-diphosphate reductase large subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.05 3.89 2 3 2 12 3 4 1 1 1 1 1 1 1 1 1 1 1 1 52.104 50.997 2;3 3.3779E-40 92935 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 145.31 126.57 2242700000 206560000 597690000 0 91030000 56883000 106250000 79932000 80288000 72270000 118800000 172590000 201470000 114680000 118130000 226120000 13938 1171 12695 116964;116965;116966;116967;116968;116969;116970;116971;116972;116973;116974;116975;116976;116977;116978;116979;116980;116981;116982 93411;93412;93413;93414;93415;93416;93417;93418;93419;93420;93421;93422;93423;93424;93425;93426;93427;93428;93429;93430;93431;93432;93433 93421 23 EQGQAPITPQQGQALAK Unmodified 1763.9166 0.91661131 2014 P84095 RHOG Rho-related GTP-binding protein RhoG yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.451 46.617 2 6.7192E-25 52234 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 107.17 99.061 123590000 0 0 0 6673000 5398800 7449000 7554100 10204000 6881200 14661000 17958000 16048000 9536000 7203300 14021000 13939 2014 12696 116983;116984;116985;116986;116987;116988;116989;116990;116991;116992;116993;116994 93434;93435;93436;93437;93438;93439;93440;93441;93442;93443;93444;93445;93446 93440 13 EQGQTQTQPGSGQR Unmodified 1500.6917 0.69169675 4841 Q9UBG3 CRNN Cornulin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 6.5439 6.6734 2 0.0041801 4538 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 55.401 41.194 8307400 0 0 0 0 0 0 1504500 4425600 0 0 0 0 2377200 0 0 13940 4841 12697 116995;116996;116997 93447 93447 1 EQGQVPLNSTALQDIISK Unmodified 1940.0215 0.021470309 2086 Q03001 DST Dystonin yes yes 0 0 0 By MS/MS 2 0 1 1 89.992 85.119 2 0.0019118 105773 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.639 66.832 16518000 0 16518000 0 0 0 0 0 0 0 0 0 0 0 0 0 13941 2086 12698 116998 93448 93448 1 EQGSWGREER Unmodified 1232.5534 0.55341235 1530 P47929 LGALS7 Galectin-7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 12.886 13.017 3 0.0053737 12171 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 96.015 64.172 182680000 0 0 0 111170000 6343100 5941600 7206000 27097000 3809300 0 7282300 0 6627000 3918900 3285300 13942 1530 12699 116999;117000;117001;117002;117003;117004;117005;117006;117007;117008 93449;93450 93450 0 EQGTGNSYTDTSGPK Unmodified 1540.6641 0.66414459 4894 Q9UHB7 AFF4 AF4/FMR2 family member 4 yes yes 0 0 0 By matching By matching By MS/MS By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 17.249 17.481 2 0.041032 17720 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 38.021 20.995 9999000 0 0 0 0 0 854810 0 0 692500 1763800 0 2105000 2854500 1728500 0 13943 4894 12700 117009;117010;117011;117012;117013;117014 93451 93451 1 EQGVEEHETLLLR Unmodified 1551.7893 0.78928553 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 55.07 55.009 3 0.0027166 62385 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 50.897 46.267 58934000 0 0 0 4792800 2903600 12654000 9418300 0 0 13380000 0 0 5221000 10564000 0 13944 5187 12701 117015;117016;117017;117018;117019;117020;117021 93452;93453;93454 93452 3 EQGVTFPAIGSQAAEQAK Unmodified 1830.9112 0.91119158 3659 Q92783 STAM Signal transducing adapter molecule 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 4 1 1 1 1 1 1 1 1 1 1 1 1 72.387 71.365 2;3 5.074E-47 88878 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.92 124.99 255470000 0 143610000 0 5399900 5381400 7468100 7384900 5334300 4449400 10337000 15435000 12344000 5923300 10441000 21962000 13945 3659 12702 117022;117023;117024;117025;117026;117027;117028;117029;117030;117031;117032;117033;117034;117035;117036;117037 93455;93456;93457;93458;93459;93460;93461;93462;93463;93464;93465;93466;93467;93468;93469 93458 14 EQGVTFPSGDIQEQLIR Unmodified 1915.964 0.96395543 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 6 24 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 83.036 82.062 2;3 1.7432E-70 101099 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 172.57 152.44 3276200000 32384000 1667900000 15457000 14798000 42980000 179970000 47905000 55882000 60201000 202000000 127920000 151080000 82906000 159710000 435130000 13946 1565 12703 117038;117039;117040;117041;117042;117043;117044;117045;117046;117047;117048;117049;117050;117051;117052;117053;117054;117055;117056;117057;117058;117059;117060;117061;117062;117063;117064;117065;117066;117067 93470;93471;93472;93473;93474;93475;93476;93477;93478;93479;93480;93481;93482;93483;93484;93485;93486;93487;93488 93475 17 EQGVTFPSGDIQEQLIRSLYQSAGVAPESFEYIEAHGTGTK Unmodified 4439.1557 0.15573854 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 99.73 93.192 4 2.2142E-53 118068 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.722 83.557 45866000 37046000 8819800 0 0 0 0 0 0 0 0 0 0 0 0 0 13947 1565 12704 117068;117069;117070 93489;93490;93491 93490 3 EQGYDVIAYLANIGQK Unmodified 1780.8996 0.89956426 737 P00966 ASS1 Argininosuccinate synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.88 3.74 4 3 10 2 4 1 1 2 2 1 2 2 95.197 93.504 2;3 1.013E-40 114965 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.72 94.212 1032900000 29773000 926040000 6195100 0 0 0 0 1057300 0 3557500 7057400 1772600 0 3231400 54219000 13948 737 12705 117071;117072;117073;117074;117075;117076;117077;117078;117079;117080;117081;117082;117083;117084;117085;117086;117087 93492;93493;93494;93495;93496;93497;93498;93499;93500;93501;93502;93503 93493 12 EQHGLQLQSEINQLHSK Unmodified 1988.0076 0.007551579 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.56 3.86 3 1 5 2 1 1 1 1 1 2 63.106 60.76 3;4 9.7815E-10 80269 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.39 95.861 234730000 119460000 74886000 5689200 0 0 3409600 0 0 0 0 0 7080400 0 4052800 20158000 13949 2495 12706 117088;117089;117090;117091;117092;117093;117094;117095;117096 93504;93505;93506;93507;93508;93509 93505 5 EQHLFLPFSYK Unmodified 1407.7187 0.71868677 774 P04114 APOB Apolipoprotein B-100;Apolipoprotein B-48 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 1 1 1 2 1 1 2 71.19 71.309 2 0.02878 81738 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 39.305 16.663 1054100000 0 0 0 28202000 47843000 73604000 44539000 51154000 47777000 66704000 89010000 238110000 54410000 60227000 252510000 13950 774 12707 117097;117098;117099;117100;117101;117102;117103;117104;117105;117106;117107;117108;117109;117110 93510;93511 93511 2 EQHLSENEPVDTNSDNNLFTDTDLK Unmodified 2874.2792 0.27915415 448 O60934 NBN Nibrin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 74.154 72.68 3 7.8412E-51 83584 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.9 94.714 240200000 12222000 132840000 6733900 4625200 5641500 13831000 0 6811300 0 12610000 9801500 0 6839500 6499000 21745000 13951 448 12708 117111;117112;117113;117114;117115;117116;117117;117118;117119;117120;117121;117122;117123 93512;93513;93514;93515;93516;93517;93518;93519;93520;93521;93522;93523;93524;93525;93526;93527 93515 16 EQHQALRQQVQADSK Unmodified 1764.8867 0.88670816 3022 Q6ZWJ1 STXBP4 Syntaxin-binding protein 4 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 19.223 15.618 3 0.0051509 22506 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.95 36.935 25304000 22995000 0 2308600 0 0 0 0 0 0 0 0 0 0 0 0 13952 3022 12709 117124;117125 93528 93528 1 EQHTEDTVK Unmodified 1085.4989 0.49891717 2661 Q32MZ4 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 yes yes 0 0 0 By matching By MS/MS 2.33 0.471 2 1 1 2 5.6323 2.3059 2 3.2864E-06 4272 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 169.41 138.12 490730000 25292000 465440000 0 0 0 0 0 0 0 0 0 0 0 0 0 13953 2661 12710 117126;117127;117128 93529;93530 93529 2 EQIALLVK Unmodified 912.56442 0.56441796 1277 P30307 CDC25C M-phase inducer phosphatase 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 64.57 64.827 2 0.033696 73417 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 53.554 31.783 25643000 0 0 0 0 0 3050200 0 0 0 3294500 3888700 5587300 2677600 3147300 3997700 13954 1277 12711 117129;117130;117131;117132;117133;117134;117135 93531 93531 1 EQICLQVPVNENDMK Oxidation (M) 1831.8444 0.84443392 1611 P49914 MTHFS 5-formyltetrahydrofolate cyclo-ligase yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 68.675 68.743 2 7.4446E-27 79036 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 125.82 99.7 42627000 0 0 0 3365700 0 10574000 0 2704300 4313400 6816400 6857200 7996400 0 0 0 13955 1611 12712 117136;117137;117138;117139;117140;117141;117142 93532;93533;93534;93535;93536;93537;93538 93533 2590 7 EQICLQVPVNENDMK Unmodified 1815.8495 0.8495193 1611 P49914 MTHFS 5-formyltetrahydrofolate cyclo-ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 76.426 75.67 2 3.8476E-38 92885 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 168.61 142.6 91037000 0 35687000 0 0 9266400 11286000 0 0 0 10299000 9200300 15298000 0 0 0 13956 1611 12712 117143;117144;117145;117146;117147;117148 93539;93540;93541;93542;93543;93544 93541 6 EQIESLTEVHRR Unmodified 1495.7743 0.77430417 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 34.869 35.038 3 0.0052211 38554 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 42.629 24.265 161130000 0 0 0 9648600 6999200 13619000 10639000 11211000 20327000 18236000 14471000 14454000 20846000 0 20679000 13957 2291 12713 117149;117150;117151;117152;117153;117154;117155;117156;117157;117158;117159 93545;93546;93547;93548;93549;93550;93551;93552;93553;93554;93555;93556 93550 12 EQIIELELK Unmodified 1113.6281 0.62814043 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77.42 76.953 2 0.0051431 88246 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.279 53.792 172610000 0 103380000 4211800 1378400 3149900 6598700 3786600 2859000 4183800 8378900 5606500 7515300 4138200 7651200 9770800 13958 3641 12714 117160;117161;117162;117163;117164;117165;117166;117167;117168;117169;117170;117171;117172;117173 93557;93558;93559;93560;93561;93562;93563;93564;93565;93566;93567;93568 93561 12 EQIIELQSK Unmodified 1086.5921 0.59208927 3509 Q8TDY2 RB1CC1 RB1-inducible coiled-coil protein 1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 48.036 48.476 2 0.034875 55038 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 46.334 10.889 40549000 0 0 0 0 0 4696100 0 0 0 0 7209100 8609400 0 6789400 13245000 13959 3509 12715 117174;117175;117176;117177;117178 93569 93569 1 EQIKSLNNQFASFIDK Unmodified 1880.9632 0.96322715 780;50 CON__ENSEMBL:ENSBTAP00000038253;P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 no no 0 0 1 By MS/MS 10 0 1 1 78.316 78.505 3 0.0063865 90660 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 38.116 28.832 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13960 50;780 12716 117179 93570 93570 1 EQILEEFSK Unmodified 1121.5605 0.56045479 407 O60506 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.39 3.7 5 1 12 1 4 1 1 1 1 1 1 1 1 1 1 1 1 1 66.089 64.491 1;2 0.0049178 82726 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.84 69.073 1132100000 35293000 813020000 15549000 18118000 14195000 17584000 16663000 14253000 14874000 24491000 21081000 32115000 21734000 24088000 49024000 13961 407 12717 117180;117181;117182;117183;117184;117185;117186;117187;117188;117189;117190;117191;117192;117193;117194;117195;117196;117197 93571;93572;93573;93574;93575;93576;93577;93578;93579;93580;93581;93582;93583;93584;93585;93586;93587;93588;93589;93590 93575 19 EQILIGLEK Unmodified 1041.607 0.60701105 2792 Q5TAX3 ZCCHC11 Terminal uridylyltransferase 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 68.935 68.971 2 0.032784 79091 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 47.198 27.411 20452000 0 0 0 0 1920100 2627500 2297300 1818100 0 3662400 0 0 3312100 4815000 0 13962 2792 12718 117198;117199;117200;117201;117202;117203;117204 93591 93591 1 EQINQQAQLQEFGQSNRK Unmodified 2145.0563 0.056292686 3024 Q70CQ2 USP34 Ubiquitin carboxyl-terminal hydrolase 34 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 47.811 47.909 3 0.00072179 53047 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 34.202 25.812 64089000 0 0 0 3441000 4292500 5080500 3743600 0 0 9810000 12203000 0 9985700 5728400 9804400 13963 3024 12719 117205;117206;117207;117208;117209;117210;117211;117212;117213 93592;93593;93594;93595;93596;93597;93598;93599 93594 8 EQIQAEQCLK Unmodified 1245.6023 0.60233638 2510 Q15276 RABEP1 Rab GTPase-binding effector protein 1 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 32.089 32.811 2 0.010295 34759 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.258 32.103 14295000 0 0 0 0 0 0 0 0 0 0 0 7479300 0 0 6815600 13964 2510 12720 117214;117215 93600 93600 1 EQIQAWMREK Unmodified 1317.65 0.64995528 623 O95155 UBE4B Ubiquitin conjugation factor E4 B yes yes 0 0 1 By MS/MS 2 0 1 1 57.363 49.183 2 0.030966 67120 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.67 60.625 6159600 6159600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13965 623 12721 117216 93601 93601 1 EQISDIDDAVR Unmodified 1259.5994 0.59935949 1730 P53999 SUB1 Activated RNA polymerase II transcriptional coactivator p15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.92 2.7 4 1 31 2 2 1 1 2 3 3 3 2 2 2 3 4 3 3 51.011 50.689 2 6.8989E-06 56673 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 140.75 97.507 5060600000 1934800 96515000 223410 448730000 363320000 264000000 0 406620000 381200000 429270000 700560000 598600000 431680000 340410000 597510000 13966 1730 12722 117217;117218;117219;117220;117221;117222;117223;117224;117225;117226;117227;117228;117229;117230;117231;117232;117233;117234;117235;117236;117237;117238;117239;117240;117241;117242;117243;117244;117245;117246;117247;117248;117249;117250;117251;117252 93602;93603;93604;93605;93606;93607;93608;93609;93610;93611;93612;93613;93614;93615;93616;93617;93618;93619;93620;93621;93622;93623;93624;93625;93626;93627;93628;93629;93630;93631;93632;93633;93634;93635;93636;93637;93638;93639;93640;93641;93642;93643;93644;93645;93646;93647;93648;93649;93650;93651;93652;93653;93654;93655;93656;93657;93658;93659;93660 93652 59 EQISDIDDAVRK Unmodified 1387.6943 0.69432251 1730 P53999 SUB1 Activated RNA polymerase II transcriptional coactivator p15 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.39 3.7 5 1 12 1 3 2 1 1 1 1 1 1 1 1 1 1 1 1 44.127 42.497 2;3 3.049E-13 54866 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 141.91 100.46 2620700000 235540000 1192600000 51378000 63334000 51421000 130200000 55210000 70610000 101710000 94164000 136380000 107550000 95673000 59913000 174920000 13967 1730 12723 117253;117254;117255;117256;117257;117258;117259;117260;117261;117262;117263;117264;117265;117266;117267;117268;117269;117270 93661;93662;93663;93664;93665;93666;93667;93668;93669;93670;93671;93672;93673;93674;93675;93676;93677;93678;93679;93680;93681 93665 15 EQISDIDDAVRKL Unmodified 1500.7784 0.77838649 1730 P53999 SUB1 Activated RNA polymerase II transcriptional coactivator p15 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS 2.31 0.606 1 7 5 5 6 2 75.918 71.046 2;3 4.2404E-92 88573 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 234.92 182.34 7804200000 2172000000 5324500000 307720000 0 0 0 0 0 0 0 0 0 0 0 0 13968 1730 12724 117271;117272;117273;117274;117275;117276;117277;117278;117279;117280;117281;117282;117283 93682;93683;93684;93685;93686;93687;93688;93689;93690;93691;93692;93693;93694;93695;93696;93697;93698;93699;93700 93694 16 EQISENPTEATDIGFGNR Unmodified 1976.9076 0.90756276 2113 Q05209 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 67.391 67.378 2 2.4337E-11 77296 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 99.531 90.576 23234000 0 0 0 2441100 1633700 0 4215900 3327800 0 0 0 4372200 2563300 4679800 0 13969 2113 12725 117284;117285;117286;117287;117288;117289;117290;117291 93701;93702;93703;93704;93705;93706 93705 6 EQITQHIADLSSK Unmodified 1468.7522 0.75217174 1613 P49916 LIG3 DNA ligase 3 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 55.808 50.948 3 0.038026 66054 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 29.013 15.296 32981000 0 26940000 6041000 0 0 0 0 0 0 0 0 0 0 0 0 13970 1613 12726 117292;117293 93707 93707 0 EQIVGPLESPVEDSLWPYK Unmodified 2185.0943 0.094300901 5180 Q9Y3Z3 SAMHD1 Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 yes yes 0 0 0 By MS/MS 2 0 1 1 96.402 91.581 2 4.6916E-05 113525 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.717 67.964 12140000 0 12140000 0 0 0 0 0 0 0 0 0 0 0 0 0 13971 5180 12727 117294 93708 93708 1 EQIVPKPEEEVAQK Unmodified 1622.8516 0.85155143 1076 P18621 RPL17 60S ribosomal protein L17 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 6 2 24 2 4 2 2 2 2 2 2 2 2 2 2 2 2 2 42.008 41.289 2;3 7.519E-39 45834 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 168.3 133.55 7528400000 39533000 996140000 13314000 356850000 381350000 587380000 41774000 408860000 449880000 552810000 633800000 813030000 836390000 559540000 857760000 13972 1076 12728 117295;117296;117297;117298;117299;117300;117301;117302;117303;117304;117305;117306;117307;117308;117309;117310;117311;117312;117313;117314;117315;117316;117317;117318;117319;117320;117321;117322;117323;117324;117325;117326 93709;93710;93711;93712;93713;93714;93715;93716;93717;93718;93719;93720;93721;93722;93723;93724;93725;93726;93727;93728;93729;93730;93731;93732;93733;93734;93735;93736;93737 93717 27 EQIVPKPEEEVAQKK Unmodified 1750.9465 0.94651445 1076 P18621 RPL17 60S ribosomal protein L17 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 35.102 35.283 3;4 4.9084E-05 37884 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 82.578 75.201 1142700000 0 0 0 78549000 77286000 33848000 105050000 90146000 38149000 90645000 112030000 140800000 148740000 104340000 123110000 13973 1076 12729 117327;117328;117329;117330;117331;117332;117333;117334;117335;117336;117337;117338;117339;117340;117341;117342;117343;117344;117345;117346;117347;117348;117349;117350 93738;93739;93740;93741;93742;93743;93744;93745;93746;93747;93748;93749;93750;93751;93752;93753;93754;93755;93756;93757;93758;93759;93760 93751 17 EQIVTIGNKPVETIGFDSIMK Oxidation (M) 2334.2141 0.21409846 2582 Q15813 TBCE Tubulin-specific chaperone E yes yes 0 1 1 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 80.86 80.564 3 1.3311E-06 93122 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 63.184 52.04 42266000 0 0 4517300 0 0 5539900 0 2402600 0 12969000 0 5282800 0 0 11555000 13974 2582 12730 117351;117352;117353;117354;117355;117356 93761;93762;93763;93764 93762 4231 4 EQIVVDLSHPGVSEDDQVSR Unmodified 2208.0659 0.065854319 425 O60701 UGDH UDP-glucose 6-dehydrogenase yes yes 0 0 0 By MS/MS 10 0 1 1 68.35 68.844 3 3.2515E-05 78291 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.658 42.177 11762000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11762000 13975 425 12731 117357 93765 93765 1 EQIYDVYR Unmodified 1084.5189 0.51892433 1400 P38919 EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 2 1 1 50.159 50.325 2 0.006389 55813 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 101.28 16.019 486960000 0 0 0 16461000 26463000 37602000 34606000 35514000 39542000 39076000 56992000 63916000 45564000 36744000 54479000 13976 1400 12732 117358;117359;117360;117361;117362;117363;117364;117365;117366;117367;117368;117369;117370 93766;93767;93768;93769;93770;93771;93772;93773;93774;93775;93776;93777;93778 93768 13 EQLAELQSGFVK Unmodified 1347.7034 0.70343063 2156 Q08379 GOLGA2 Golgin subfamily A member 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.12 70.196 2 0.00010334 81149 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 88.056 63.281 99386000 0 0 0 4391000 5759200 7433600 7439000 6002400 6852000 8392900 10062000 16065000 7502700 7301400 12185000 13977 2156 12733 117371;117372;117373;117374;117375;117376;117377;117378;117379;117380;117381;117382 93779;93780;93781;93782;93783;93784;93785;93786;93787 93787 8 EQLAFQVEQVK Unmodified 1317.6929 0.69286595 461 O75146 HIP1R Huntingtin-interacting protein 1-related protein yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 73.124 66.195 2 0.0055293 83955 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.898 58.171 55274000 8089800 47184000 0 0 0 0 0 0 0 0 0 0 0 0 0 13978 461 12734 117383;117384 93788 93788 1 EQLAIAEFAR Unmodified 1146.6033 0.60332266 1067 P17987 TCP1 T-complex protein 1 subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 2 1 1 74.672 74.739 2 0.00054449 86026 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 146.23 136.84 1334200000 0 0 0 42997000 44090000 138410000 86128000 73531000 52097000 125000000 150100000 159830000 81863000 106480000 273720000 13979 1067 12735 117385;117386;117387;117388;117389;117390;117391;117392;117393;117394;117395;117396;117397 93789;93790;93791;93792;93793;93794;93795;93796;93797;93798;93799;93800 93791 12 EQLAQAMFDHIPVGVGSK Oxidation (M) 1941.9618 0.96184694 5168 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.17 3.85 2 1 3 1 1 1 1 1 1 75.19 72.86 3 1.6279E-05 89384 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 84.499 71.224 240600000 45497000 31248000 42604000 0 0 45734000 0 0 34178000 0 41342000 0 0 0 0 13980 5168 12736 117398;117399;117400;117401;117402;117403 93801;93802;93803;93804;93805;93806 93806 6541 6 EQLAQAMFDHIPVGVGSK Unmodified 1925.9669 0.96693232 5168 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.8 4 1 8 2 2 1 1 1 1 1 1 1 1 1 85.936 83.962 2;3 4.2698E-20 106076 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.65 113.17 520290000 103740000 304890000 3550000 0 0 10473000 0 9786700 7971700 17564000 9522100 7415600 0 4098500 41285000 13981 5168 12736 117404;117405;117406;117407;117408;117409;117410;117411;117412;117413;117414;117415;117416 93807;93808;93809;93810;93811;93812;93813;93814;93815;93816;93817;93818;93819 93809 13 EQLAQAVAR Unmodified 984.53524 0.53524309 2033 Q00341 HDLBP Vigilin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 29.487 29.483 2 0.009287 31388 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 67.169 16.466 163650000 0 0 0 36960000 27231000 0 0 0 0 0 0 99461000 0 0 0 13982 2033 12737 117417;117418;117419 93820;93821 93820 2 EQLAQAVARIK Unmodified 1225.7143 0.71427009 2033 Q00341 HDLBP Vigilin yes yes 0 0 1 By MS/MS 2 0 1 1 56.032 52.155 3 0.034245 65148 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 42.718 21.345 8439600 0 0 8439600 0 0 0 0 0 0 0 0 0 0 0 0 13983 2033 12738 117420 93822 93822 1 EQLDMAGAR Unmodified 989.46003 0.46002924 2391 Q14203 DCTN1 Dynactin subunit 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 28.666 28.802 2 0.011907 31341 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 62.107 33.889 23538000 0 0 0 3990800 0 4518300 0 0 0 0 0 0 0 0 15029000 13984 2391 12739 117421;117422;117423;117424 93823;93824;93825;93826 93826 4 EQLDNQLDAYMSK Unmodified 1553.7032 0.70317264 5179 Q9Y3Y2 CHTOP Chromatin target of PRMT1 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 68.723 68.325 2 1.3144E-26 85236 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 159.94 140.18 223730000 0 110630000 0 3861700 5507600 8474100 5207400 8158400 0 11481000 11788000 16178000 11920000 15482000 15044000 13985 5179 12740 117425;117426;117427;117428;117429;117430;117431;117432;117433;117434;117435;117436;117437 93827;93828;93829;93830;93831;93832;93833;93834;93835;93836;93837;93838 93830 11 EQLDNQLDAYMSK Oxidation (M) 1569.6981 0.69808726 5179 Q9Y3Y2 CHTOP Chromatin target of PRMT1 protein yes yes 0 1 0 By MS/MS By MS/MS 6 4 1 1 1 1 54.525 48.719 2 0.0058917 62971 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 63.944 51.708 12222000 0 12222000 0 0 0 0 0 0 0 0 0 0 0 0 0 13986 5179 12740 117438;117439 93839;93840 93839 6550 2 EQLDPDELETITMHK Oxidation (M) 1813.8404 0.8403944 4751 Q9NYU2 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes yes 0 1 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 73.515 73.362 3 0.00039617 84492 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.888 47.419 24653000 0 0 0 4295900 0 14369000 0 0 0 5988300 0 0 0 0 0 13987 4751 12741 117440;117441;117442 93841 93841 6125 1 EQLDPDELETITMHK Unmodified 1797.8455 0.84547978 4751 Q9NYU2 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 76.807 76.943 3 0.014537 88422 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 31.677 28.864 15588000 0 0 0 0 0 2475500 0 0 0 0 0 0 0 3369800 9742700 13988 4751 12741 117443;117444;117445 93842 93842 1 EQLDSSNSTIAILQTEK Unmodified 1875.9426 0.94255129 430 O60763 USO1 General vesicular transport factor p115 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 4 1 1 1 1 1 1 1 1 1 1 1 1 74.174 73.182 2;3 3.3223E-14 84458 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 124.51 101.4 718040000 0 476480000 0 9989500 11538000 28580000 11744000 10661000 14480000 29443000 24018000 28260000 18314000 17996000 36545000 13989 430 12742 117446;117447;117448;117449;117450;117451;117452;117453;117454;117455;117456;117457;117458;117459;117460;117461 93843;93844;93845;93846;93847;93848;93849;93850;93851;93852;93853;93854;93855;93856;93857;93858;93859 93846 16 EQLDTETSTTQSETIQTAASLLASQK Unmodified 2780.3563 0.35634184 1644 P51003 PAPOLA Poly(A) polymerase alpha yes yes 0 0 0 By MS/MS By MS/MS 6.5 3.5 1 1 1 1 87.798 86.246 3 6.6954E-07 100481 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 27.722 22.103 25513000 0 19551000 0 0 0 0 0 0 0 5961900 0 0 0 0 0 13990 1644 12743 117462;117463 93860;93861 93860 2 EQLDTSNESAEPK Unmodified 1446.6474 0.6474319 3802 Q96DX7 TRIM44 Tripartite motif-containing protein 44 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 20.889 21.165 2 2.9044E-08 20931 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 128.01 102.39 37854000 0 0 0 0 1726200 3615200 0 0 2147900 3381400 5741900 3877300 4526000 5219800 7618700 13991 3802 12744 117464;117465;117466;117467;117468;117469;117470;117471;117472;117473 93862;93863;93864;93865;93866;93867;93868;93869;93870;93871 93865 10 EQLEAAKPEPVIEEVDLANLAPR Unmodified 2530.3279 0.32788266 3541 Q8WUD4 CCDC12 Coiled-coil domain-containing protein 12 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 86.357 86.508 3 3.2453E-72 100067 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.758 85.958 19328000 0 0 0 0 0 0 0 0 0 4227100 1236100 2434100 0 0 11431000 13992 3541 12745 117474;117475;117476;117477 93872;93873;93874 93873 3 EQLEEEEEAK Unmodified 1232.5408 0.54084156 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.557 18.755 2 3.5026E-11 18971 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 159.11 134.96 1128900000 0 0 0 85666000 81679000 106750000 90506000 65170000 56633000 100150000 93903000 154510000 98961000 70759000 124260000 13993 1356 12746 117478;117479;117480;117481;117482;117483;117484;117485;117486;117487;117488;117489 93875;93876;93877;93878;93879;93880;93881;93882;93883;93884;93885;93886;93887 93879 13 EQLENSPSR Unmodified 1058.4993 0.49925152 412 O60563 CCNT1 Cyclin-T1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.401 11.521 2 0.0051747 10655 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 81.296 50.007 17276000 0 0 0 608260 992050 962910 1533400 1242700 1365700 1618500 0 1463000 2374900 2784200 2330800 13994 412 12747 117490;117491;117492;117493;117494;117495;117496;117497;117498;117499;117500 93888;93889;93890;93891;93892;93893 93889 6 EQLENSPSRR Unmodified 1214.6004 0.60036255 412 O60563 CCNT1 Cyclin-T1 yes yes 0 0 1 By MS/MS 10 0 1 1 8.2599 8.1283 3 0.043075 6436 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 52.79 16.846 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13995 412 12748 117501 93894 93894 1 EQLEQEK Unmodified 902.43453 0.434526 1974 P78344 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 7.225 7.3244 2 0.023356 5697 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 89.55 16.511 189180000 0 0 0 13493000 18158000 25732000 24949000 26876000 23718000 0 0 11730000 15575000 12765000 16189000 13996 1974 12749 117502;117503;117504;117505;117506;117507;117508;117509;117510;117511 93895;93896;93897 93895 3 EQLEWERER Unmodified 1273.6051 0.60511357 3371 Q8N8S7 ENAH Protein enabled homolog yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 35.656 35.896 3 0.036884 40222 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 35.944 27.431 49171000 0 0 0 3046300 0 5201400 2870600 3208700 3674100 4234000 4665800 6204000 3840200 4274400 7951900 13997 3371 12750 117512;117513;117514;117515;117516;117517;117518;117519;117520;117521;117522 93898 93898 1 EQLGEEIDSK Unmodified 1146.5404 0.54044763 4588 Q9NR30 DDX21 Nucleolar RNA helicase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 32.325 32.46 2 0.0070493 35391 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 72.643 57.492 35791000 0 0 0 0 0 5616000 4785100 7004400 6092100 0 0 0 12294000 0 0 13998 4588 12751 117523;117524;117525;117526;117527;117528;117529;117530;117531 93899;93900;93901;93902;93903;93904;93905;93906;93907 93904 9 EQLGYIVFSGPR Unmodified 1364.7089 0.70885036 1006 P14735 IDE Insulin-degrading enzyme yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 81.048 81.093 2 0.0095731 92989 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 47.559 34.603 82179000 0 0 0 30960000 2211300 3924100 3549900 6166500 0 0 6962400 5185100 3308100 3670900 16241000 13999 1006 12752 117532;117533;117534;117535;117536;117537;117538;117539;117540;117541 93908;93909;93910;93911;93912 93909 5 EQLLAAEPVR Unmodified 1124.619 0.61897272 4276 Q9BZV1 UBXN6 UBX domain-containing protein 6 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 52.614 52.708 2 0.0024208 59573 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 83.783 59.628 139580000 0 0 0 7163600 5613600 16325000 10832000 8645500 6940600 20477000 13738000 0 11119000 11687000 27033000 14000 4276 12753 117542;117543;117544;117545;117546;117547;117548;117549;117550;117551;117552 93913;93914;93915;93916;93917;93918;93919;93920;93921 93920 9 EQLLDCEGEDGWNK Unmodified 1691.7097 0.70971458 1601;32 P49792;A6NKT7;Q7Z3J3 RANBP2;RGPD3;RGPD4 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 3;RanBP2-like and GRIP domain-containing protein 4 no no 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 61.559 58.902 2 0.0041379 67461 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.019 21.508 29492000 0 24856000 0 0 0 0 0 0 0 0 0 0 0 0 4635600 14001 1601;32 12754 117553;117554 93922;93923 93923 2 EQLLQSNPVLEAFGNAK Unmodified 1856.9632 0.96322715 367 O43795 MYO1B Unconventional myosin-Ib no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 89.622 89.089 2 9.9836E-14 103130 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 116.01 93.813 52164000 0 18155000 0 0 2157000 2116900 1344900 2554000 2192600 4581800 3651800 4719100 1377200 2590300 6723700 14002 367 12755 117555;117556;117557;117558;117559;117560;117561;117562;117563;117564;117565;117566;117567 93924;93925;93926;93927;93928;93929;93930;93931;93932;93933;93934;93935;93936 93928 13 EQLMREEAEQK Oxidation (M) 1405.6507 0.65074314 2407 Q14444 CAPRIN1 Caprin-1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 1 2 2 2 2 9.5648 9.688 2;3 0.00032391 8037 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 76.165 53.614 475520000 0 0 0 34011000 33730000 34946000 50997000 25689000 32049000 32910000 77357000 56396000 34972000 25289000 37172000 14003 2407 12756 117568;117569;117570;117571;117572;117573;117574;117575;117576;117577;117578;117579;117580;117581;117582;117583;117584;117585;117586;117587;117588;117589;117590 93937;93938;93939;93940;93941;93942;93943;93944;93945 93945 3944 8 EQLMREEAEQK Unmodified 1389.6558 0.65582851 2407 Q14444 CAPRIN1 Caprin-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 19.523 19.721 2;3 8.9933E-89 20498 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 209.85 161.29 1215100000 0 0 0 91407000 80522000 83483000 96424000 95680000 68608000 131510000 144550000 120770000 92568000 64145000 145460000 14004 2407 12756 117591;117592;117593;117594;117595;117596;117597;117598;117599;117600;117601;117602;117603;117604;117605;117606;117607;117608;117609;117610;117611;117612;117613;117614 93946;93947;93948;93949;93950;93951;93952;93953;93954;93955;93956;93957;93958;93959;93960;93961;93962;93963;93964;93965;93966;93967 93947 15 EQLMSQEER Oxidation (M) 1164.5081 0.50810164 1382 P36915 GNL1 Guanine nucleotide-binding protein-like 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 19 2 2 2 2 2 2 2 1 1 2 1 10.685 10.761 2 0.0098103 9369 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 57.859 24.308 35432000 0 0 0 3551900 2407200 4694700 5222500 2592200 4154100 3904600 0 0 2487200 4190700 2227000 14005 1382 12757 117615;117616;117617;117618;117619;117620;117621;117622;117623;117624;117625;117626;117627;117628;117629;117630;117631;117632;117633 93968;93969;93970;93971;93972 93969 2146 5 EQLMSQEER Unmodified 1148.5132 0.51318702 1382 P36915 GNL1 Guanine nucleotide-binding protein-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 22.262 22.377 2 0.0038923 23373 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 99.802 76.76 89275000 0 0 0 7058100 4446300 9310500 5469500 7378600 4040800 13161000 14742000 0 15280000 8388300 0 14006 1382 12757 117634;117635;117636;117637;117638;117639;117640;117641;117642;117643;117644 93973;93974;93975;93976;93977;93978;93979;93980;93981 93977 9 EQLMSQEERSFQDYLGK Unmodified 2086.963 0.96296915 1382 P36915 GNL1 Guanine nucleotide-binding protein-like 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 80.319 76.68 3 0.00032723 95335 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 49.537 29.489 41331000 0 36765000 4566500 0 0 0 0 0 0 0 0 0 0 0 0 14007 1382 12758 117645;117646 93982;93983 93982 2 EQLNEYK Unmodified 922.43961 0.43961137 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 17.161 17.342 2 0.028921 17214 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 76.134 13.417 56196000 0 0 0 3686900 3592200 3586700 3727300 4135500 2999300 4443100 6275200 7868000 4982000 4220700 6678800 14008 2501 12759 117647;117648;117649;117650;117651;117652;117653;117654;117655;117656;117657;117658 93984;93985;93986;93987;93988 93986 5 EQLNLLSR Unmodified 971.53999 0.53999412 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.268 55.399 2 0.02313 62709 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 60.59 30.17 85368000 0 0 0 4008100 4769100 4852900 5674500 5691900 5442500 6889400 11832000 9314900 7134700 6852400 12906000 14009 2446 12760 117659;117660;117661;117662;117663;117664;117665;117666;117667;117668;117669;117670 93989;93990;93991;93992;93993;93994 93991 6 EQLNLLSRAEEAK Unmodified 1499.7944 0.79437091 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 1 By MS/MS 2 0 1 1 65.759 62.006 3 0.021531 76817 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 42.209 18.367 3713600 0 0 3713600 0 0 0 0 0 0 0 0 0 0 0 0 14010 2446 12761 117671 93995 93995 1 EQLNNQILCQSK Unmodified 1473.7246 0.72457678 5006 Q9ULV0 MYO5B Unconventional myosin-Vb yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 46.226 46.343 2 0.011447 52544 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 59.426 45.656 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14011 5006 12762 117672;117673 93996;93997 93997 2 EQLNRIEEGLDQINK Unmodified 1797.9221 0.92209062 122 O00161 SNAP23 Synaptosomal-associated protein 23 yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 68.955 67.761 3 4.9589E-05 87179 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.836 87.555 50365000 0 24924000 9739600 0 0 0 0 0 0 2796900 0 3925200 0 2879800 6099500 14012 122 12763 117674;117675;117676;117677;117678;117679 93998;93999;94000 93998 2 EQLPPMSEDFLLDALSEDFSGPQNASSLK Oxidation (M) 3180.4809 0.48089043 1113 P20810 CAST Calpastatin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 99.539 94.884 3 1.8387E-146 118083 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 161.05 155.85 236800000 33549000 169660000 33594000 0 0 0 0 0 0 0 0 0 0 0 0 14013 1113 12764 117680;117681;117682;117683 94001;94002;94003;94004;94005;94006 94002 1600 6 EQLPPMSEDFLLDALSEDFSGPQNASSLK Unmodified 3164.486 0.4859758 1113 P20810 CAST Calpastatin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 2 2 1 100.83 95.479 3 1.8707E-36 119448 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.06 87.714 334050000 93657000 214020000 26372000 0 0 0 0 0 0 0 0 0 0 0 0 14014 1113 12764 117684;117685;117686;117687;117688 94007;94008;94009;94010;94011;94012;94013 94008 7 EQLPPTTVQTIVK Unmodified 1452.8188 0.81879474 378 O43896 KIF1C Kinesin-like protein KIF1C yes yes 0 0 0 By matching By matching By MS/MS By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 68.833 68.75 2 0.035628 79261 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 29.767 12.294 18213000 0 0 0 1955500 2956800 2506800 1459600 0 0 3576900 0 5757000 0 0 0 14015 378 12765 117689;117690;117691;117692;117693;117694 94014;94015 94014 2 EQLQALIPYVLNPSK Unmodified 1711.9509 0.95087155 2869 Q6DD88 ATL3 Atlastin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 93.406 92.547 2 8.6405E-23 107386 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 119.39 80.806 32458000 0 15794000 0 0 0 0 0 0 0 5261400 0 3089500 0 1163200 7150100 14016 2869 12766 117695;117696;117697;117698;117699;117700 94016;94017;94018;94019 94018 4 EQLQSVTTNSGYTR Unmodified 1582.7587 0.75871368 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 39.008 38.459 2 2.5113E-22 42800 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 147.37 123.02 137710000 0 20825000 0 4699700 4364600 5125600 5994400 4705400 5882500 7561800 14695000 12357000 13501000 14226000 23771000 14017 2203 12767 117701;117702;117703;117704;117705;117706;117707;117708;117709;117710;117711;117712;117713;117714 94020;94021;94022;94023;94024;94025;94026;94027;94028;94029;94030;94031;94032;94033 94026 14 EQLQSVTTNSGYTRLSDVDANTAIK Unmodified 2710.341 0.34096655 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 74.124 70.225 3 2.1285E-30 88123 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.21 88.614 58815000 0 53868000 4947000 0 0 0 0 0 0 0 0 0 0 0 0 14018 2203 12768 117715;117716;117717 94034;94035;94036 94034 3 EQLRDISSIGLK Unmodified 1357.7565 0.75652884 3170 Q86VP6 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.28 3.25 6 1 25 2 3 2 2 3 2 2 2 2 2 2 2 2 2 2 62.626 61.418 2;3 6.1865E-13 82807 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 145.01 80.972 1630500000 251100000 575760000 279180000 17093000 13340000 72770000 26531000 28521000 21260000 52534000 62891000 46401000 35234000 49138000 98756000 14019 3170 12769 117718;117719;117720;117721;117722;117723;117724;117725;117726;117727;117728;117729;117730;117731;117732;117733;117734;117735;117736;117737;117738;117739;117740;117741;117742;117743;117744;117745;117746;117747;117748;117749 94037;94038;94039;94040;94041;94042;94043;94044;94045;94046;94047;94048;94049;94050;94051;94052;94053;94054;94055;94056 94048 12 EQLREYVEK Unmodified 1192.6088 0.60880197 3663 Q92797 SYMPK Symplekin yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 34.865 30.788 2 0.0023319 38765 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 126.07 44.771 30876000 0 15862000 15014000 0 0 0 0 0 0 0 0 0 0 0 0 14020 3663 12770 117750;117751 94057 94057 1 EQLRQPPLPTSSPGVSSGDSVAR Unmodified 2364.2034 0.20335085 2763 Q5SXM2 SNAPC4 snRNA-activating protein complex subunit 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 59.335 59.517 3 1.643E-17 67835 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 80.412 72.83 109910000 0 0 0 0 8348100 12903000 9818900 10874000 7941400 8867700 7670100 11531000 10614000 8851000 12490000 14021 2763 12771 117752;117753;117754;117755;117756;117757;117758;117759;117760;117761;117762 94058;94059;94060;94061;94062;94063;94064;94065;94066;94067;94068;94069 94060 12 EQLRVDALER Unmodified 1227.6571 0.65714914 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 46.311 46.478 3 0.0028124 51042 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.781 41.258 120440000 0 0 0 7783900 5051400 5384700 7668800 0 8131900 0 21009000 19078000 11695000 12629000 22008000 14022 645 12772 117763;117764;117765;117766;117767;117768;117769;117770;117771;117772 94070;94071;94072;94073;94074;94075;94076;94077 94071 8 EQLRVDALERTLEQK Unmodified 1826.985 0.98502522 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 0 2 By MS/MS 2 0 1 1 79.714 71.583 4 0.043243 94025 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 28.351 17.564 10321000 10321000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14023 645 12773 117773 94078 94078 1 EQLRVPAVPPGVR Unmodified 1416.8201 0.82013215 4683 Q9NVU0 POLR3E DNA-directed RNA polymerase III subunit RPC5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 63.661 63.68 3 0.01017 72759 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 40.377 33.94 52157000 0 0 0 3464500 3548800 5773100 5453900 4769300 4286400 7599200 6700700 10561000 0 0 0 14024 4683 12774 117774;117775;117776;117777;117778;117779;117780;117781;117782 94079;94080;94081;94082 94080 3 EQLSAERQEQIK Unmodified 1457.7474 0.74742071 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 22.851 22.421 3 0.0022811 22768 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 49.423 32.056 457020000 0 133420000 0 14823000 13577000 26283000 14822000 19507000 14606000 35447000 40447000 45065000 30222000 24132000 44673000 14025 5071 12775 117783;117784;117785;117786;117787;117788;117789;117790;117791;117792;117793;117794;117795;117796 94083;94084;94085;94086;94087;94088;94089;94090;94091;94092;94093;94094;94095 94093 5 EQLSAQELMESGLQIQK Unmodified 1930.967 0.9669919 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 87.673 83.372 2;3 2.3263E-105 103597 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 267.23 239.8 96154000 0 96154000 0 0 0 0 0 0 0 0 0 0 0 0 0 14026 2203 12776 117797;117798;117799 94096;94097;94098 94096 2 EQLSDMMMINK 3 Oxidation (M) 1386.5829 0.58292285 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 3 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.28 3.23 3 1 14 1 2 1 1 1 1 1 2 1 1 1 1 1 2 1 26.009 25.218 2 4.6096E-05 27214 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 113.66 94.68 286590000 5378100 55777000 1565300 25026000 15741000 24976000 22993000 15783000 15210000 19483000 14323000 22026000 17748000 19957000 10609000 14027 1518 12777 117800;117801;117802;117803;117804;117805;117806;117807;117808;117809;117810;117811;117812;117813;117814;117815;117816;117817 94099;94100;94101;94102;94103;94104;94105;94106;94107;94108;94109;94110;94111;94112;94113;94114;94115;94116;94117;94118;94119;94120;94121;94122;94123;94124;94125;94126;94127 94102 2398;2399;2400 28 EQLSDMMMINK 2 Oxidation (M) 1370.588 0.58800822 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.95 2.64 4 2 38 1 5 4 4 3 2 3 3 3 3 5 3 2 3 42.083 41.607 2 8.5426E-05 48305 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 91.867 68.547 683970000 0 229150000 0 43954000 39164000 52993000 34503000 25367000 29952000 44338000 43195000 48339000 42958000 27041000 23017000 14028 1518 12777 117818;117819;117820;117821;117822;117823;117824;117825;117826;117827;117828;117829;117830;117831;117832;117833;117834;117835;117836;117837;117838;117839;117840;117841;117842;117843;117844;117845;117846;117847;117848;117849;117850;117851;117852;117853;117854;117855;117856;117857;117858;117859;117860;117861 94128;94129;94130;94131;94132;94133;94134;94135;94136;94137;94138;94139;94140;94141;94142;94143;94144;94145;94146;94147;94148;94149;94150;94151;94152;94153;94154;94155;94156;94157;94158;94159;94160;94161;94162;94163 94134 2398;2399;2400 33 EQLSDMMMINK Oxidation (M) 1354.5931 0.5930936 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.69 2.94 8 1 45 3 5 1 4 3 4 4 4 4 4 4 3 3 4 4 58.922 58.07 2 0.00017374 62835 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 91.867 76.716 1210400000 10100000 715400000 1887900 47066000 38635000 42410000 38545000 34636000 26664000 58608000 33131000 39013000 22816000 41964000 59519000 14029 1518 12777 117862;117863;117864;117865;117866;117867;117868;117869;117870;117871;117872;117873;117874;117875;117876;117877;117878;117879;117880;117881;117882;117883;117884;117885;117886;117887;117888;117889;117890;117891;117892;117893;117894;117895;117896;117897;117898;117899;117900;117901;117902;117903;117904;117905;117906;117907;117908;117909;117910;117911;117912;117913;117914;117915 94164;94165;94166;94167;94168;94169;94170;94171;94172;94173;94174;94175;94176;94177;94178;94179;94180;94181;94182;94183;94184;94185;94186;94187;94188;94189;94190;94191;94192;94193;94194;94195;94196;94197;94198;94199;94200;94201;94202;94203;94204;94205;94206;94207;94208;94209;94210;94211;94212;94213;94214;94215 94192 2398;2399;2400 43 EQLSDMMMINK Unmodified 1338.5982 0.59817898 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 73.916 72.871 2 0.00020504 84232 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 107.15 85.068 1139800000 12142000 847870000 0 11507000 12421000 33389000 11387000 15206000 16237000 34368000 25953000 28986000 10437000 22340000 57517000 14030 1518 12777 117916;117917;117918;117919;117920;117921;117922;117923;117924;117925;117926;117927;117928;117929;117930 94216;94217;94218;94219;94220;94221;94222;94223;94224;94225;94226;94227;94228;94229;94230 94216 15 EQLSGSPWILLR Unmodified 1397.7667 0.76669959 3384 Q8NB16 MLKL Mixed lineage kinase domain-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 88.343 88.466 2 0.010187 102548 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 46.819 20.305 11599000 0 0 0 0 0 2009800 0 863010 0 1332500 0 1885200 0 1215600 4292400 14031 3384 12778 117931;117932;117933;117934;117935;117936 94231;94232;94233;94234;94235;94236 94234 6 EQLSLPAEFPDK Unmodified 1372.6874 0.68744622 380 O43929 ORC4 Origin recognition complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.17 2.36 1 1 16 2 2 2 1 2 2 1 1 1 1 1 1 1 76.783 76.345 2 0.00021175 88326 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 84.198 69.054 778700000 0 385920000 0 18558000 26418000 31287000 31313000 37583000 27879000 38300000 35804000 38942000 25746000 31135000 49811000 14032 380 12779 117937;117938;117939;117940;117941;117942;117943;117944;117945;117946;117947;117948;117949;117950;117951;117952;117953;117954 94237;94238;94239;94240;94241;94242;94243;94244;94245;94246;94247;94248;94249;94250;94251 94237 14 EQLSSANHSLQLASQIQK Unmodified 1981.0229 0.022867292 1406;2357 P39880;Q13948 CUX1 Homeobox protein cut-like 1;Protein CASP no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 2 1 1 1 1 1 58.298 58.415 3 0.00017859 66163 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.936 0.79999 100030000 0 0 0 7957300 6862100 5746900 9267300 5336400 6711600 10783000 8569400 8565300 6424300 8795100 15008000 14033 1406;2357 12780 117955;117956;117957;117958;117959;117960;117961;117962;117963;117964;117965;117966;117967 94252;94253;94254;94255;94256;94257;94258 94258 6 EQLSSSDTAPR Unmodified 1189.5575 0.55749468 143 O00327 ARNTL Aryl hydrocarbon receptor nuclear translocator-like protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 18.067 17.926 2 0.032649 18187 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 53.327 26.073 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14034 143 12781 117968 94259 94259 1 EQLTDADTK Unmodified 1019.4771 0.47711909 4605 Q9NRL2 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.65 18.847 2 0.040422 18489 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 44.395 18.658 1455300000 0 0 0 84836000 83719000 206620000 62925000 61647000 216450000 128690000 121040000 142970000 148880000 79080000 118440000 14035 4605 12782 117969;117970;117971;117972;117973;117974;117975;117976;117977;117978;117979;117980 94260 94260 1 EQLTEEAREGIK Unmodified 1401.71 0.70997257 4855 Q9UBS4 DNAJB11 DnaJ homolog subfamily B member 11 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.16 3.73 5 2 12 2 4 1 1 1 1 1 1 1 1 1 1 1 1 1 36.211 34.425 2;3 3.6012E-24 44914 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 178.54 129.94 361920000 66092000 111990000 11168000 7030500 6083300 9441000 10338000 12150000 7844000 11512000 28914000 22440000 11880000 12254000 32785000 14036 4855 12783 117981;117982;117983;117984;117985;117986;117987;117988;117989;117990;117991;117992;117993;117994;117995;117996;117997;117998;117999 94261;94262;94263;94264;94265;94266;94267;94268;94269;94270;94271;94272;94273;94274;94275;94276;94277;94278;94279;94280;94281 94265 19 EQLTPSQIMSLEK Unmodified 1502.765 0.76504461 2030 Q00059 TFAM Transcription factor A, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 80.659 75.947 2 0.0013706 94555 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.306 53.882 45287000 0 45287000 0 0 0 0 0 0 0 0 0 0 0 0 0 14037 2030 12784 118000 94282;94283 94282 2 EQLTQELQEARK Unmodified 1471.7631 0.76307078 2689 Q4V328 GRIPAP1 GRIP1-associated protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 6 4 3 3 1 1 1 1 1 1 47.153 44.173 3 8.1678E-23 57995 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.18 70.774 140570000 13964000 44261000 50444000 2943900 5035600 0 0 0 0 0 0 0 0 0 23924000 14038 2689 12785 118001;118002;118003;118004;118005;118006 94284;94285;94286;94287;94288;94289;94290 94285 7 EQLVDQGIMPPLK Unmodified 1466.7803 0.78030075 4995 Q9ULH7 MKL2 MKL/myocardin-like protein 2 yes yes 0 0 0 By MS/MS 10 0 1 1 68.098 68.243 2 0.011326 78424 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 42.743 2.8263 21639000 0 0 0 0 0 0 21639000 0 0 0 0 0 0 0 0 14039 4995 12786 118007 94291 94291 1 EQLWLANEGLITR Unmodified 1541.8202 0.82019173 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 20 1 2 2 2 2 2 2 1 1 1 2 2 84.036 84.112 2;3 1.0075E-25 97408 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 163.12 146.09 351910000 0 0 0 10821000 28161000 48612000 20594000 28932000 30776000 39507000 29462000 27185000 3942100 24687000 59231000 14040 1518 12787 118008;118009;118010;118011;118012;118013;118014;118015;118016;118017;118018;118019;118020;118021;118022;118023;118024;118025;118026;118027 94292;94293;94294;94295;94296;94297;94298;94299;94300;94301;94302;94303;94304;94305;94306;94307;94308 94304 17 EQLWVDQQK Unmodified 1172.5826 0.58258722 2956 Q6PIW4 FIGNL1 Fidgetin-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 49.061 44.267 2 0.020196 57824 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.26 33.782 31238000 0 29092000 2146400 0 0 0 0 0 0 0 0 0 0 0 0 14041 2956 12788 118028;118029 94309 94309 0 EQLYQEIIHYFDK Unmodified 1724.841 0.84098675 2386 Q14185 DOCK1 Dedicator of cytokinesis protein 1 yes yes 0 0 0 By MS/MS 3 0 1 1 96.818 93.541 3 0.044315 112146 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 29.981 23.949 2417900 0 2417900 0 0 0 0 0 0 0 0 0 0 0 0 0 14042 2386 12789 118030 94310 94310 1 EQMGQMLTR Oxidation (M) 1108.5005 0.50051385 2656 Q2TAL8 QRICH1 Glutamine-rich protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 21.062 21.385 2 0.006243 22147 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 66.621 50.959 33096000 0 0 0 0 0 4287800 3371400 0 0 3106600 5063800 3951100 3365500 3484600 6465200 14043 2656 12790 118031;118032;118033;118034;118035;118036;118037;118038 94311;94312;94313;94314;94315;94316;94317;94318 94312 4326;4327 8 EQMGQMLTR Unmodified 1092.5056 0.50559922 2656 Q2TAL8 QRICH1 Glutamine-rich protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 40.31 40.542 2 0.0094522 44851 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 66.692 43.263 72303000 0 0 0 0 3096600 5125400 4912300 4788700 3761400 8082000 8063900 8434000 0 7792600 18246000 14044 2656 12790 118039;118040;118041;118042;118043;118044;118045;118046;118047;118048;118049 94319;94320;94321;94322;94323;94324;94325;94326;94327 94324 9 EQMGQMLTR 2 Oxidation (M) 1124.4954 0.49542847 2656 Q2TAL8 QRICH1 Glutamine-rich protein 1 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 10.936 11.044 2 0.0041142 9494 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.91 44.37 5198800 0 0 0 0 909240 0 0 0 1204900 0 0 3084600 0 0 0 14045 2656 12790 118050;118051;118052 94328 94328 4326;4327 1 EQMQPTHPIR Oxidation (M) 1251.603 0.60300508 2109 Q04917 YWHAH 14-3-3 protein eta yes yes 0 1 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 11.02 11.289 2 0.01168 9330 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.794 25.366 3823600 0 0 0 0 0 0 0 0 0 0 0 0 718000 756560 2349000 14046 2109 12791 118053;118054;118055 94329 94329 3411 1 EQMQPTHPIR Unmodified 1235.6081 0.60809046 2109 Q04917 YWHAH 14-3-3 protein eta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 2 20.097 20.518 2;3 0.023694 19870 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.368 18.766 98265000 0 0 0 0 0 0 4744700 8102000 0 0 20647000 16612000 0 0 48160000 14047 2109 12791 118056;118057;118058;118059;118060;118061 94330;94331 94330 2 EQMVAVTEANEALK Oxidation (M) 1547.7501 0.75012283 2155 Q08378 GOLGA3 Golgin subfamily A member 3 yes yes 0 1 0 By MS/MS 10 0 1 1 49.556 49.615 2 0.012015 56084 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 51.092 32.312 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14048 2155 12792 118062 94332 94332 3464 1 EQMVAVTEANEALK Unmodified 1531.7552 0.75520821 2155 Q08378 GOLGA3 Golgin subfamily A member 3 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 65.614 62.951 2 0.0031715 79648 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.234 38.345 69478000 0 63779000 0 0 0 0 0 0 0 0 0 0 0 0 5699200 14049 2155 12792 118063;118064 94333;94334 94333 2 EQNIVFNAETYSNLIK Unmodified 1881.9472 0.94724273 1464 P42704 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 0 0 By MS/MS 2 0 2 2 91.123 86.227 2;3 9.2574E-46 107197 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.42 113.46 174140000 0 174140000 0 0 0 0 0 0 0 0 0 0 0 0 0 14050 1464 12793 118065;118066 94335;94336;94337;94338 94337 3 EQNPPPARSEDMPFSPK Unmodified 1925.8942 0.89416131 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 55.244 49.429 3 8.2018E-05 63876 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 54.764 32.754 57890000 0 57890000 0 0 0 0 0 0 0 0 0 0 0 0 0 14051 2203 12794 118067 94339 94339 1 EQNQDSQTEAEELRK Unmodified 1803.8235 0.82349878 3340 Q8N573 OXR1 Oxidation resistance protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 20.631 20.807 3 0.0034587 21722 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 24.881 13.937 89059000 0 0 0 8610700 5807300 7940800 5939300 0 5923100 10961000 0 8614100 12969000 8234500 14059000 14052 3340 12795 118068;118069;118070;118071;118072;118073;118074;118075;118076;118077 94340 94340 1 EQNSALPTSSQDEELMEVVEK Unmodified 2362.0846 0.08460043 5066 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 82.153 82.252 3 0.011686 95096 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 25.153 20.394 48127000 0 0 0 0 2892400 2311800 0 3678600 1798400 3928800 5183200 5696900 0 8829500 13808000 14053 5066 12796 118078;118079;118080;118081;118082;118083;118084;118085;118086 94341 94341 1 EQNSELRAK Unmodified 1073.5465 0.54653606 399 O60437 PPL Periplakin yes yes 0 0 1 By MS/MS 2 0 1 1 7.3954 4.1523 2 0.032331 6319 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.139 25.89 124370000 0 124370000 0 0 0 0 0 0 0 0 0 0 0 0 0 14054 399 12797 118087 94342 94342 0 EQNSLSLLEAR Unmodified 1258.6517 0.65172941 3523 Q8TF01 PNISR Arginine/serine-rich protein PNISR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 65.859 66.145 2 0.027995 75575 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 39.625 18.755 95517000 0 0 0 0 0 0 16827000 0 11780000 10918000 15339000 26779000 0 0 13873000 14055 3523 12798 118088;118089;118090;118091;118092;118093;118094 94343;94344 94343 2 EQNSPIYISR Unmodified 1205.6041 0.60405094 4651 Q9NUP9;Q9HAP6 LIN7C;LIN7B Protein lin-7 homolog C;Protein lin-7 homolog B no no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 43.646 43.842 2 0.012742 49487 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 68.557 42.663 76503000 0 0 0 7082800 4560500 0 7492300 0 0 0 11598000 13251000 8045600 7405300 17068000 14056 4651 12799 118095;118096;118097;118098;118099;118100;118101;118102;118103 94345;94346 94345 2 EQNYDLTEVSESMK Unmodified 1671.7298 0.72978132 705 O95905 ECD Protein SGT1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 65.602 65.231 2 0.00034971 74317 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.229 90.387 85999000 0 22644000 0 3237200 2730500 3584400 4394700 4785600 4189800 6544500 5949500 6447200 4198600 5485200 11808000 14057 705 12800 118104;118105;118106;118107;118108;118109;118110;118111;118112;118113;118114;118115;118116 94347;94348;94349;94350;94351;94352;94353;94354;94355;94356;94357;94358;94359 94351 13 EQNYDLTEVSESMK Oxidation (M) 1687.7247 0.72469594 705 O95905 ECD Protein SGT1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By matching 8.4 3.2 1 4 1 1 1 1 1 48.622 48.939 2 0.0056992 55196 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 41.684 33.579 25937000 0 0 0 0 0 0 6207500 3281600 0 0 0 0 6567100 0 9880600 14058 705 12800 118117;118118;118119;118120;118121 94360;94361 94360 850 2 EQPAVVGLDSEEMERLPGDASQK Unmodified 2484.1802 0.18023215 4553 Q9NPI6 DCP1A mRNA-decapping enzyme 1A yes yes 0 0 1 By MS/MS By MS/MS 5 3.56 1 1 1 2 1 77.03 74.346 3 0.00036679 86377 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 36.935 29.904 57411000 0 52525000 0 0 0 0 0 0 0 4885700 0 0 0 0 0 14059 4553 12801 118122;118123;118124 94362;94363;94364 94362 3 EQPFGEGVPLDGDDPEHIQWIFQK Unmodified 2780.3082 0.30820986 3481 Q8TBC4 UBA3 NEDD8-activating enzyme E1 catalytic subunit yes yes 0 0 0 By MS/MS 2 0 1 1 96.183 88.052 3 6.241E-05 113854 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.974 47.232 18991000 18991000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14060 3481 12802 118125 94365;94366 94366 2 EQPGDLFNEDWDSELK Unmodified 1920.8378 0.83775186 4562 Q9NQ92 COPRS Coordinator of PRMT5 and differentiation stimulator yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 88.42 83.756 2 2.5277E-51 104817 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 186.76 166.33 115700000 11736000 101980000 1988300 0 0 0 0 0 0 0 0 0 0 0 0 14061 4562 12803 118126;118127;118128;118129 94367;94368;94369;94370 94367 4 EQPGPERPIPAGDGK Unmodified 1546.774 0.77396981 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 27.347 27.648 3 0.00077442 29715 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 58.885 44.532 63465000 0 0 0 6306200 0 0 0 4284800 0 5332400 0 13314000 11198000 8601100 14428000 14062 645 12804 118130;118131;118132;118133;118134;118135;118136 94371;94372;94373 94373 3 EQPGTFDYQR Unmodified 1239.552 0.55201537 3516 Q8TEH3 DENND1A DENN domain-containing protein 1A yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 36.789 37.101 2 0.027966 41051 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 71.692 20.989 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14063 3516 12805 118137;118138 94374;94375 94374 2 EQPLDEELK Unmodified 1099.5397 0.53971935 792 P05023 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.821 41.946 2 0.0052332 46637 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 79.474 58.527 82776000 0 0 0 4355700 6570100 6251900 3953000 8735600 4364400 8300600 12365000 0 10689000 7848400 9341500 14064 792 12806 118139;118140;118141;118142;118143;118144;118145;118146;118147;118148;118149;118150 94376;94377;94378;94379;94380;94381;94382;94383;94384;94385;94386;94387 94377 12 EQPLGLPYPATR Unmodified 1340.7089 0.70885036 488 O75376 NCOR1 Nuclear receptor corepressor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.541 71.613 2 2.7489E-05 82345 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 96.113 88.399 152200000 0 0 0 7251900 8610200 11606000 10211000 11472000 8873100 12244000 19616000 17767000 11467000 12235000 20850000 14065 488 12807 118151;118152;118153;118154;118155;118156;118157;118158;118159;118160;118161;118162 94388;94389;94390;94391;94392;94393;94394;94395;94396;94397;94398 94397 11 EQPLPAQDPVSVK Unmodified 1406.7405 0.74054442 402 O60479 DLX3 Homeobox protein DLX-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 52.423 52.545 2 0.0016544 58150 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.385 48.114 133970000 0 0 0 5926700 5179600 14850000 7592700 8547800 8301000 19050000 0 19636000 17248000 11285000 16358000 14066 402 12808 118163;118164;118165;118166;118167;118168;118169;118170;118171;118172;118173 94399;94400;94401;94402;94403;94404;94405;94406 94401 8 EQPLPAQDPVSVKEEPEAEVR Unmodified 2346.1703 0.17031939 402 O60479 DLX3 Homeobox protein DLX-3 yes yes 0 0 1 By MS/MS 10 0 1 1 60.59 60.766 3 2.5998E-09 69234 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 58.093 50.101 21523000 0 0 0 0 0 0 0 21523000 0 0 0 0 0 0 0 14067 402 12809 118174 94407 94407 1 EQPPAETPTDAAVLTSPPAPAPPVTPSK Unmodified 2765.4123 0.41234058 2667 Q3KQU3 MAP7D1 MAP7 domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 78.102 78.148 3 6.6742E-16 90000 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 58.08 51.282 47543000 0 0 0 0 5668000 10126000 5983100 0 6432800 6161900 0 0 6557300 6613900 0 14068 2667 12810 118175;118176;118177;118178;118179;118180;118181 94408;94409;94410;94411;94412;94413;94414;94415;94416 94410 9 EQPPPLQPPQQSIR Unmodified 1613.8526 0.85255449 2958 Q6PJG2 ELMSAN1 ELM2 and SANT domain-containing protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 56.309 56.334 2 0.002931 63381 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 49.5 40.068 16941000 0 0 0 0 2297200 2369100 2871100 2079000 0 5146200 0 0 0 2178800 0 14069 2958 12811 118182;118183;118184;118185;118186;118187 94417 94417 1 EQPPTEPGPQSASEVEK Unmodified 1808.8428 0.84283724 4782 Q9NZT2 OGFR Opioid growth factor receptor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.02 38.201 2 9.504E-25 41372 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 97.86 80.387 88636000 0 0 0 5040900 3343200 5316500 5548100 5157100 4521700 7281100 10211000 13752000 8119800 6775800 13569000 14070 4782 12812 118188;118189;118190;118191;118192;118193;118194;118195;118196;118197;118198;118199 94418;94419;94420;94421;94422;94423;94424;94425;94426;94427;94428;94429 94421 12 EQPQLTSTCHIAISNSENLLGK Unmodified 2439.2064 0.20638732 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 0 By MS/MS 2 0 1 1 79.866 75.154 3 0.034056 93610 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 40.369 14.765 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14071 1492 12813 118200 94430 94430 1 EQPQQTVIADHSLSASHMETTMK Unmodified 2568.1948 0.19483636 2343 Q13769 THOC5 THO complex subunit 5 homolog yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 58.445 58.257 4 8.7641E-09 65433 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.677 59.795 91314000 0 0 12817000 0 0 0 0 7745600 0 7403900 10720000 12777000 10932000 8627900 20291000 14072 2343 12814 118201;118202;118203;118204;118205;118206;118207;118208 94431;94432;94433 94431 3 EQPSEGATELR Unmodified 1215.5731 0.57314474 3657 Q92766 RREB1 Ras-responsive element-binding protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.573 24.777 2 0.0079576 25166 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.725 27.95 47066000 0 0 0 4094600 2610100 3542600 2811000 3956000 2963300 3762700 4279200 4830800 4845500 3149700 6220500 14073 3657 12815 118209;118210;118211;118212;118213;118214;118215;118216;118217;118218;118219;118220 94434;94435;94436;94437;94438;94439 94435 6 EQPWVSVQPR Unmodified 1224.6251 0.62512073 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 57.167 57.37 2 0.0023177 64488 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 104.06 80.2 181750000 0 0 0 0 15215000 21867000 0 0 14529000 22159000 25203000 26054000 0 25298000 31425000 14074 2392 12816 118221;118222;118223;118224;118225;118226;118227;118228 94440;94441;94442;94443;94444;94445;94446;94447;94448;94449;94450 94447 11 EQPWVSVQPRK Unmodified 1352.7201 0.72008375 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 52.501 46.49 3 0.03783 58172 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 33.87 22.651 118460000 110630000 0 7833800 0 0 0 0 0 0 0 0 0 0 0 0 14075 2392 12817 118229;118230 94451 94451 1 EQQAQQEDPIER Unmodified 1469.6746 0.6746497 5171 Q9Y3P9 RABGAP1 Rab GTPase-activating protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 23.82 24.306 2 0.010814 25401 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 67.726 29.433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14076 5171 12818 118231 94452 94452 1 EQQASMEEK Unmodified 1078.4601 0.46008882 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By matching By MS/MS By matching By matching By matching By matching 10 0 6 1 1 1 1 1 1 7.0052 7.0969 2 0.031872 5113 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 47.574 31.43 9697600 0 0 0 0 1279800 2199400 1179300 1628100 1743700 0 0 0 0 0 1667400 14077 965 12819 118232;118233;118234;118235;118236;118237 94453 94453 1 EQQDLEFAK Unmodified 1106.5244 0.52440364 308 O43242 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 38.155 38.284 2 0.0030173 41977 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 126.52 54.384 561850000 0 0 0 37770000 46067000 67590000 15935000 20829000 13318000 82625000 108930000 132320000 15414000 21048000 0 14078 308 12820 118238;118239;118240;118241;118242;118243;118244;118245;118246;118247;118248 94454;94455;94456;94457;94458;94459;94460;94461;94462;94463;94464 94458 11 EQQEAIEHIDEVQNEIDR Unmodified 2194.0138 0.013818748 2049;906 P0DME0;Q01105 SETSIP;SET Protein SETSIP;Protein SET no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.06 68.141 3 1.722E-83 78121 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 149.57 128.03 264190000 0 0 0 6191000 9992800 19388000 7407500 8679700 9558300 11383000 23881000 24885000 12408000 30006000 100400000 14079 906;2049 12821 118249;118250;118251;118252;118253;118254;118255;118256;118257;118258;118259;118260 94465;94466;94467;94468;94469;94470;94471;94472;94473;94474;94475;94476;94477;94478;94479;94480 94473 16 EQQEAIEHIDEVQNEIDRLNEQASEEILK Unmodified 3448.6594 0.65940015 2049 Q01105 SET Protein SET yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.21 0.41 11 3 7 5 2 93.53 87.951 3;4;5 0 114438 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 300.42 285.14 2845200000 1927500000 851900000 65828000 0 0 0 0 0 0 0 0 0 0 0 0 14080 2049 12822 118261;118262;118263;118264;118265;118266;118267;118268;118269;118270;118271;118272;118273;118274 94481;94482;94483;94484;94485;94486;94487;94488;94489;94490;94491;94492;94493 94482 13 EQQEAIEHIDEVQNEIDRLNEQDSEEILK Unmodified 3492.6492 0.6492294 906 P0DME0 SETSIP Protein SETSIP yes yes 0 0 1 By MS/MS 2 0 1 1 98.82 90.689 3 0.00026788 116982 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 35.033 18.632 37297000 37297000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14081 906 12823 118275 94494;94495 94495 2 EQQELLMK Unmodified 1017.5165 0.51648149 535 O75717 WDHD1 WD repeat and HMG-box DNA-binding protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 42.498 37.35 2 0.0080672 48729 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 137.18 97.222 103420000 0 103420000 0 0 0 0 0 0 0 0 0 0 0 0 0 14082 535 12824 118276 94496 94496 1 EQQELSLTEASLQK Unmodified 1602.8101 0.81008055 4530 Q9HD67 MYO10 Unconventional myosin-X yes yes 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 62.628 62.868 2 0.008201 71806 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 75.819 60.847 14348000 0 0 0 0 0 0 0 0 0 0 5218900 0 4400200 4728700 0 14083 4530 12825 118277;118278;118279 94497 94497 0 EQQESLALEELELQK Unmodified 1785.8996 0.89962384 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.42 1.93 1 11 1 1 1 1 1 1 1 1 1 1 1 1 79.819 79.641 2;3 1.2243E-30 91862 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 146.36 104.36 73114000 0 1917500 0 0 3962800 4436600 4611200 5859900 4396900 6970700 7121500 8786200 5653000 4520200 14877000 14084 2291 12826 118280;118281;118282;118283;118284;118285;118286;118287;118288;118289;118290;118291 94498;94499;94500;94501;94502;94503;94504;94505;94506;94507;94508;94509 94501 12 EQQEVADRLETK Unmodified 1444.7158 0.71578623 553 O75884 RBBP9 Putative hydrolase RBBP9 yes yes 0 0 1 By MS/MS By matching 2.4 0.49 3 2 4 1 30.331 26.184 2;3 0.0010676 34359 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.605 54.213 135280000 0 130330000 4945300 0 0 0 0 0 0 0 0 0 0 0 0 14085 553 12827 118292;118293;118294;118295;118296 94510;94511;94512 94511 2 EQQILTLFR Unmodified 1146.6397 0.63970816 2704 Q53H82 LACTB2 Beta-lactamase-like protein 2 yes yes 0 0 0 By MS/MS 10 0 1 1 82.327 82.529 2 0.0036563 95196 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.355 65.926 7384800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7384800 14086 2704 12828 118297 94513 94513 1 EQQIVIQSSGGLSK Unmodified 1472.7835 0.78347187 1399 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 48.839 49.23 2 6.1568E-19 55460 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 130.56 109.69 102130000 0 0 0 0 0 13708000 0 0 0 13712000 15392000 21051000 0 9701200 28569000 14087 1399 12829 118298;118299;118300;118301;118302;118303;118304 94514;94515;94516;94517;94518;94519;94520;94521;94522;94523 94518 10 EQQLAEIEAR Unmodified 1185.599 0.59896556 1968 P69849;Q15155;Q5JPE7 NOMO3;NOMO1;NOMO2 Nodal modulator 3;Nodal modulator 1;Nodal modulator 2 yes no 0 0 0 By MS/MS 10 0 1 1 42.997 42.469 2 0.025761 48092 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 70.908 51.131 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14088 1968 12830 118305 94524 94524 1 EQQLGLK Unmodified 814.45487 0.45486751 4863 Q9UBW8 COPS7A COP9 signalosome complex subunit 7a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 24.378 23.804 2 0.029815 25722 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 75.311 20.785 471050000 19971000 324620000 0 7399400 5456400 9463300 7628600 6624000 0 13293000 14783000 16215000 10830000 11981000 22788000 14089 4863 12831 118306;118307;118308;118309;118310;118311;118312;118313;118314;118315;118316;118317;118318 94525;94526;94527 94527 3 EQQLLSTLK Unmodified 1058.5972 0.59717465 632 O95239 KIF4A Chromosome-associated kinesin KIF4A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 54.715 54.419 2 0.012756 60273 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.828 33.698 381670000 0 271470000 0 0 7322200 9580800 8798800 6586900 5850100 11489000 10412000 13534000 10898000 7451000 18281000 14090 632 12832 118319;118320;118321;118322;118323;118324;118325;118326;118327;118328;118329;118330 94528;94529;94530 94530 3 EQQLPVNEETLFQK Unmodified 1701.8574 0.85736509 3084 Q7Z3K3 POGZ Pogo transposable element with ZNF domain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.257 76.314 2 1.4315E-11 87665 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 119.45 100.7 140860000 0 0 0 6582700 8980000 9496800 8581200 13949000 8727400 12032000 15112000 14809000 10431000 14012000 18150000 14091 3084 12833 118331;118332;118333;118334;118335;118336;118337;118338;118339;118340;118341;118342 94531;94532;94533;94534;94535;94536;94537;94538;94539;94540;94541;94542 94534 12 EQQLQERCK Unmodified 1217.5823 0.58226964 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 8.2536 4.9506 2 0.0021543 7278 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.52 79.44 7568200 0 7568200 0 0 0 0 0 0 0 0 0 0 0 0 0 14092 2495 12834 118343;118344 94543 94543 1 EQQLQQELLALK Unmodified 1439.7984 0.79839365 1784 P56524;Q9UQL6 HDAC4;HDAC5 Histone deacetylase 4;Histone deacetylase 5 yes no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 79.65 79.734 2 1.497E-08 91924 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 159.4 131.01 34641000 0 0 0 0 2122400 3403400 2502900 0 3033400 4596800 0 6969800 0 3589100 8423500 14093 1784 12835 118345;118346;118347;118348;118349;118350;118351;118352 94544;94545;94546;94547 94545 4 EQQSNIAVFQGK Unmodified 1347.6783 0.67827852 3424 Q8NEF9 SRFBP1 Serum response factor-binding protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 52.15 46.376 2 0.0053824 60218 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.178 68.041 20946000 0 20946000 0 0 0 0 0 0 0 0 0 0 0 0 0 14094 3424 12836 118353 94548 94548 1 EQQVADLQLK Unmodified 1170.6245 0.62445203 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 48.816 49.292 2 0.0019564 54530 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.87 88.132 37240000 0 0 0 0 0 0 0 0 0 0 0 0 0 12916000 24324000 14095 2495 12837 118354;118355;118356;118357 94549;94550;94551;94552 94549 4 EQREAELLTSAEK Unmodified 1502.7577 0.75765105 413 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 7.4 3.68 4 1 10 1 3 1 1 1 1 1 1 1 1 1 1 1 42.254 40.553 2;3 7.7913E-05 44772 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 52.891 47.251 161360000 13499000 77679000 8916600 0 6092300 5199000 7660800 5058700 4863900 5916900 5287000 9039600 6260100 5884400 0 14096 413 12838 118358;118359;118360;118361;118362;118363;118364;118365;118366;118367;118368;118369;118370;118371;118372 94553;94554;94555;94556;94557;94558;94559;94560;94561;94562;94563;94564;94565 94563 12 EQREEEVEEEEKEEDEEK Unmodified 2320.9667 0.96665336 4203 Q9BW71 HIRIP3 HIRA-interacting protein 3 yes yes 0 0 2 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.04 2.6 3 22 2 1 2 1 2 2 2 1 2 2 2 2 2 2 23.739 23.391 3;4 1.1965E-75 31317 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 184.01 176.17 177960000 69287000 0 2761600 6298300 3724800 4337800 5927300 6160400 2381400 9747400 12661000 15911000 14748000 7475600 16533000 14097 4203 12839 118373;118374;118375;118376;118377;118378;118379;118380;118381;118382;118383;118384;118385;118386;118387;118388;118389;118390;118391;118392;118393;118394;118395;118396;118397 94566;94567;94568;94569;94570;94571;94572;94573;94574 94569 9 EQRGEPETFLPLDYLEVKPTDEK Unmodified 2732.3545 0.35449135 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 2 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 3 2 1 92.527 87.465 3;4 8.0776E-11 110883 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.184 71.657 100110000 80623000 15832000 3657400 0 0 0 0 0 0 0 0 0 0 0 0 14098 2431 12840 118398;118399;118400;118401;118402;118403 94575;94576;94577;94578;94579;94580 94577 6 EQRQLSSEK Unmodified 1103.5571 0.55710075 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 6.0613 3.3385 2 0.0040612 5262 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 147.4 86.723 59017000 0 46543000 12473000 0 0 0 0 0 0 0 0 0 0 0 0 14099 2495 12841 118404;118405 94581;94582 94582 2 EQSAAMSQEAASPATVQSR Unmodified 1947.8956 0.89561787 106 Q9C075;CON__Q9C075 KRT23 Keratin, type I cytoskeletal 23 yes no 0 0 0 By MS/MS By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching 10 0 12 2 1 1 1 1 1 2 2 1 36.627 36.772 2;3 1.8897E-12 40281 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 119.96 102.6 + 60605000 0 0 0 23779000 1767000 1833100 2679700 7222100 0 3093700 5096400 11766000 3368700 0 0 14100 106 12842 118406;118407;118408;118409;118410;118411;118412;118413;118414;118415;118416;118417 94583;94584;94585;94586;94587 94585 4 EQSELDQDLDDVEEVEEEETGEETK Unmodified 2923.2102 0.21019069 1761 P55209 NAP1L1 Nucleosome assembly protein 1-like 1 yes yes 0 0 0 By MS/MS By MS/MS 1.5 0.5 3 3 4 2 97.033 94.143 2;3 4.8694E-192 101565 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 216.55 206.83 494680000 140470000 354220000 0 0 0 0 0 0 0 0 0 0 0 0 0 14101 1761 12843 118418;118419;118420;118421;118422;118423 94588;94589;94590;94591;94592;94593;94594 94593 7 EQSELVDLAENIQQK Unmodified 1742.8687 0.86865806 3890 Q96JB2 COG3 Conserved oligomeric Golgi complex subunit 3 yes yes 0 0 0 By MS/MS 3 0 1 1 82.946 79.673 3 0.021182 95441 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 32.702 28.311 9920600 0 9920600 0 0 0 0 0 0 0 0 0 0 0 0 0 14102 3890 12844 118424 94595 94595 1 EQSEVSVSPR Unmodified 1116.5411 0.54111633 3049 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 22.086 22.007 2 0.044161 22719 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 38.754 12.649 15087000 0 0 0 4681100 3007400 0 3980600 0 3418300 0 0 0 0 0 0 14103 3049 12845 118425;118426;118427;118428 94596 94596 1 EQSGTIYLQHADEEREK Unmodified 2031.9498 0.94976193 1387 P37198 NUP62 Nuclear pore glycoprotein p62 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 2 24 1 1 2 2 2 2 2 2 2 2 2 2 2 2 35.612 35.384 3;4 1.2718E-06 39022 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 80.609 76.89 1543100000 12393000 0 30294000 56241000 49762000 114830000 95304000 131240000 101180000 183510000 128360000 170450000 146170000 125080000 198290000 14104 1387 12846 118429;118430;118431;118432;118433;118434;118435;118436;118437;118438;118439;118440;118441;118442;118443;118444;118445;118446;118447;118448;118449;118450;118451;118452;118453;118454 94597;94598;94599;94600;94601;94602;94603;94604;94605;94606;94607;94608;94609;94610;94611;94612;94613;94614;94615;94616;94617 94613 16 EQSHEVQPGAPPPPLPK Unmodified 1806.9264 0.92644771 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 48.69 48.064 2;3 7.2044E-46 62707 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 170.04 154.5 123580000 0 34810000 0 0 2532300 5660100 5123400 6055200 4671900 15114000 8703900 9190900 8985800 8643600 14094000 14105 645 12847 118455;118456;118457;118458;118459;118460;118461;118462;118463;118464;118465;118466;118467 94618;94619;94620;94621 94618 3 EQSIFGDHRDEEEETHMK Unmodified 2215.944 0.94402462 2621 Q16643 DBN1 Drebrin yes yes 0 0 1 By MS/MS 2 0 1 1 46.935 39.457 3 0.0013052 54643 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.547 43.742 7836500 7836500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14106 2621 12848 118468 94622 94622 1 EQSILELGSLLAK Unmodified 1399.7922 0.79224564 129 O00231 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 93.651 92.539 2 3.0045E-08 114833 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 133.89 96.702 1554900000 61199000 1292300000 10955000 3246800 9238700 12167000 3705800 5696500 5398700 41409000 33882000 34342000 3261300 8418900 29621000 14107 129 12849 118469;118470;118471;118472;118473;118474;118475;118476;118477;118478;118479;118480;118481;118482;118483;118484;118485 94623;94624;94625;94626;94627;94628;94629;94630;94631;94632;94633;94634;94635;94636;94637 94624 14 EQSLDALQTHYDELQAR Unmodified 2015.9548 0.95484731 2155 Q08378 GOLGA3 Golgin subfamily A member 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 68.136 68.282 3 0.00041119 77752 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.121 46.751 59310000 0 0 0 0 1937300 5143600 3553900 2984900 3277000 6373200 6190000 7663500 0 6737700 15449000 14108 2155 12850 118486;118487;118488;118489;118490;118491;118492;118493;118494;118495 94638;94639;94640;94641;94642;94643;94644;94645 94641 8 EQSLHYGSVLLITELPEDGCTEEDVRK Unmodified 3116.4972 0.49720919 2456 Q14966 ZNF638 Zinc finger protein 638 yes yes 0 0 1 By MS/MS 2 0 1 1 90.155 82.024 4 3.1682E-08 106595 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.155 62.326 7986500 7986500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14109 2456 12851 118496 94646;94647 94647 2 EQSLPSVMGSVPEGVLEDIK Oxidation (M) 2129.0562 0.056200835 4759 Q9NZ32 ACTR10 Actin-related protein 10 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 88.953 84.911 2 4.4551E-08 105453 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.706 72.923 44748000 0 44748000 0 0 0 0 0 0 0 0 0 0 0 0 0 14110 4759 12852 118497;118498 94648;94649 94648 6133 2 EQSLPSVMGSVPEGVLEDIK Unmodified 2113.0613 0.061286213 4759 Q9NZ32 ACTR10 Actin-related protein 10 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 95.497 91.839 2 2.1892E-17 113573 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 142.19 129.64 94274000 0 93605000 668990 0 0 0 0 0 0 0 0 0 0 0 0 14111 4759 12852 118499;118500 94650;94651 94651 2 EQSLQSQLDEAQR Unmodified 1530.7274 0.72741355 4179 Q9BV73 CEP250 Centrosome-associated protein CEP250 yes yes 0 0 0 By MS/MS 10 0 1 1 44.55 45.304 2 0.00806 50348 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 74.944 58.371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14112 4179 12853 118501 94652 94652 1 EQSNDDYVLEK Unmodified 1338.5939 0.59393976 2097 Q03468 ERCC6 DNA excision repair protein ERCC-6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.917 35.098 2 0.00030792 38093 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 94.692 52.405 154980000 0 0 0 11605000 8657100 13822000 10115000 7168200 9433000 15075000 13786000 15082000 17955000 12210000 20068000 14113 2097 12854 118502;118503;118504;118505;118506;118507;118508;118509;118510;118511;118512;118513 94653;94654;94655;94656;94657;94658;94659;94660;94661;94662;94663;94664;94665 94663 13 EQSNPALAIK Unmodified 1069.5768 0.57677356 1633 P50613 CDK7 Cyclin-dependent kinase 7 yes yes 0 0 0 By MS/MS 2 0 1 1 43.083 37.935 2 0.025821 49173 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.91 38.269 21982000 0 21982000 0 0 0 0 0 0 0 0 0 0 0 0 0 14114 1633 12855 118514 94666 94666 1 EQSNPYMVLDIDK Unmodified 1550.7287 0.72865911 455 O75116 ROCK2 Rho-associated protein kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 79.478 77.975 2 0.0021423 95880 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.82 61.956 62455000 0 56451000 0 0 0 2439100 0 0 0 0 3564600 0 0 0 0 14115 455 12856 118515;118516;118517 94667;94668;94669 94668 2 EQSQLTATQTR Unmodified 1261.6262 0.62624295 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 17.124 17.014 2 0.00029757 15430 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 90.108 68.022 309050000 0 12943000 0 16053000 21846000 25397000 26569000 19071000 21833000 21485000 22435000 28149000 32044000 35244000 25985000 14116 2930 12857 118518;118519;118520;118521;118522;118523;118524;118525;118526;118527;118528;118529;118530 94670;94671;94672;94673;94674;94675;94676;94677;94678;94679;94680;94681;94682;94683;94684 94679 14 EQSQLTATQTRTVNK Unmodified 1703.8802 0.8802258 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 24.775 21.215 3 0.0010693 27009 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 65.092 53.822 62791000 0 58571000 4219400 0 0 0 0 0 0 0 0 0 0 0 0 14117 2930 12858 118531;118532 94685;94686;94687 94686 3 EQSQPCADNAVLSSGLTAAR Unmodified 2073.9749 0.97493082 1094 P19784 CSNK2A2 Casein kinase II subunit alpha' yes yes 0 0 0 By MS/MS 2 0 2 2 70.204 64.335 2;3 1.1344E-12 81821 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.59 107.74 97740000 0 97740000 0 0 0 0 0 0 0 0 0 0 0 0 0 14118 1094 12859 118533;118534 94688;94689;94690 94689 3 EQSSEAAETGVSENEENPVR Unmodified 2160.9407 0.94071338 2647 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 37.44 37.609 2 1.7926E-24 40681 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 121.31 116.03 49168000 0 0 0 2144200 3133200 4733900 3425000 3371600 3299600 4980200 5596100 6731100 4726100 0 7026700 14119 2647 12860 118535;118536;118537;118538;118539;118540;118541;118542;118543;118544;118545 94691;94692;94693;94694;94695;94696;94697;94698;94699;94700 94694 10 EQSTRSSGHSSSELSPDAVEK Unmodified 2217.0145 0.01454703 5066 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 0 0 1 By MS/MS 2 0 1 1 28.201 25.095 3 0.012262 31934 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 29.84 14.586 3638400 0 0 3638400 0 0 0 0 0 0 0 0 0 0 0 0 14120 5066 12861 118546 94701;94702 94702 2 EQTADGVAVIPVLQR Unmodified 1594.8679 0.8678702 4970 Q9UKK9 NUDT5 ADP-sugar pyrophosphatase yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 1 4 1 1 1 1 1 1 1 1 1 1 1 1 80.904 80.002 2;3 1.0589E-14 92628 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 124.1 91.497 680800000 212980 198480000 0 19795000 7010100 8180700 9230500 10097000 4832500 10254000 76215000 70542000 9909100 61560000 194480000 14121 4970 12862 118547;118548;118549;118550;118551;118552;118553;118554;118555;118556;118557;118558;118559;118560;118561;118562;118563 94703;94704;94705;94706;94707;94708;94709;94710;94711;94712;94713;94714;94715;94716;94717;94718;94719 94713 16 EQTAQAIANTAR Unmodified 1272.6422 0.64222736 3978 Q96RU2 USP28 Ubiquitin carboxyl-terminal hydrolase 28 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 30.966 28.715 2 0.00051381 36831 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.611 67.668 9106100 0 6089500 0 0 0 0 3016600 0 0 0 0 0 0 0 0 14122 3978 12863 118564;118565;118566;118567;118568 94720;94721;94722;94723;94724;94725;94726 94724 7 EQTAQAIANTARAYEK Unmodified 1763.8802 0.8802258 3978 Q96RU2 USP28 Ubiquitin carboxyl-terminal hydrolase 28 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 61.112 56.273 3 0.010129 72589 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 30.536 24.099 22009000 0 19110000 2898900 0 0 0 0 0 0 0 0 0 0 0 0 14123 3978 12864 118569;118570 94727 94727 1 EQTEGEYSSLEHESAR Unmodified 1850.7919 0.7918643 374 O43837 IDH3B Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 34.192 34.499 3 0.002438 37871 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 41.386 38.36 27279000 0 0 0 0 0 3807400 0 2416200 0 3722500 4946100 0 3477300 2588800 6320800 14124 374 12865 118571;118572;118573;118574;118575;118576;118577 94728;94729 94728 2 EQTEQILR Unmodified 1015.5298 0.52982336 1134 P22102 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.737 29.929 2 0.0032105 31091 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 147.34 67.108 287060000 0 0 0 11338000 9172800 26755000 14035000 10966000 11474000 21595000 31434000 33853000 19677000 23720000 73039000 14125 1134 12866 118578;118579;118580;118581;118582;118583;118584;118585;118586;118587;118588;118589 94730;94731;94732;94733;94734;94735;94736;94737;94738;94739;94740;94741 94733 9 EQTEQILRDIQQHK Unmodified 1764.9119 0.91186028 1134 P22102 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 66.239 60.566 3 1.375E-18 78015 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.02 109.6 259940000 33316000 196600000 30027000 0 0 0 0 0 0 0 0 0 0 0 0 14126 1134 12867 118590;118591;118592;118593 94742;94743;94744;94745;94746 94743 5 EQTFSGGTSQDTK Unmodified 1384.6107 0.61065246 5122 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.914 15.084 2 9.8478E-33 13646 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 167.12 113.15 373760000 0 0 0 13915000 14986000 13568000 24793000 19358000 18101000 29116000 39023000 46590000 49725000 49149000 55437000 14127 5122 12868 118594;118595;118596;118597;118598;118599;118600;118601;118602;118603;118604;118605 94747;94748;94749;94750;94751;94752;94753;94754;94755;94756;94757 94753 11 EQTGLEAYALGLDTK Unmodified 1607.8043 0.80426689 1539 P48449 LSS Lanosterol synthase yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.777 79.871 2 0.00079778 92383 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 77.593 53.211 34314000 0 0 0 0 2963300 2873400 2303400 2817200 2689400 3843600 0 5125800 2506000 2806100 6385500 14128 1539 12869 118606;118607;118608;118609;118610;118611;118612;118613;118614;118615;118616 94758;94759;94760 94760 3 EQTLCILANIADGTTAK Unmodified 1817.9193 0.91931342 3220 Q8IUR7 ARMC8 Armadillo repeat-containing protein 8 yes yes 0 0 0 By MS/MS 2 0 1 1 92.547 87.636 3 0.001234 108863 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 42.044 30.989 16973000 0 16973000 0 0 0 0 0 0 0 0 0 0 0 0 0 14129 3220 12870 118617 94761 94761 1 EQTLHTPVMMQTPQLTSTIMREPK 3 Oxidation (M) 2844.382 0.3819852 3326 Q8N3U4 STAG2 Cohesin subunit SA-2 yes yes 0 3 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 61.212 61.451 4 5.8432E-06 70043 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 41.763 36.551 33605000 0 0 0 0 0 0 7295100 0 6501200 0 0 10160000 9648400 0 0 14130 3326 12871 118618;118619;118620;118621 94762 94762 4914;4915;4916 1 EQTLSPTITSGLHNIAR Unmodified 1836.9694 0.96937516 614 O94979 SEC31A Protein transport protein Sec31A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 71.026 71.199 3 0.023337 82067 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 35.098 30.617 25204000 0 0 0 0 0 5044800 0 3638600 3911800 4622900 0 0 0 0 7986200 14131 614 12872 118622;118623;118624;118625;118626 94763 94763 0 EQTTDQPLAK Unmodified 1129.5615 0.56151742 4869 Q9UDY8 MALT1 Mucosa-associated lymphoid tissue lymphoma translocation protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 15.912 16.101 2 0.0087229 16368 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 59.35 37.219 64881000 0 0 0 4197600 2500300 5100300 0 5623300 0 0 8623800 11449000 9857700 0 17529000 14132 4869 12873 118627;118628;118629;118630;118631;118632;118633;118634;118635 94764;94765;94766;94767;94768 94764 5 EQTVSETLGPGGEAVR Unmodified 1628.8006 0.8005785 3007 Q6ZRV2 FAM83H Protein FAM83H yes yes 0 0 0 By MS/MS 10 0 1 1 49.181 48.577 2 1.9417E-06 55465 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 83.314 60.673 5763400 0 0 0 5763400 0 0 0 0 0 0 0 0 0 0 0 14133 3007 12874 118636 94769 94769 1 EQVAAMQAGLLK Unmodified 1257.6751 0.67510739 2774 Q5T447 HECTD3 E3 ubiquitin-protein ligase HECTD3 yes yes 0 0 0 By MS/MS 2 0 1 1 69.591 63.722 2 0.024178 81174 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.305 57.374 69760000 0 69760000 0 0 0 0 0 0 0 0 0 0 0 0 0 14134 2774 12875 118637 94770 94770 1 EQVAEETSGDSK Unmodified 1278.5576 0.55755426 1349 P35251 RFC1 Replication factor C subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 8.1646 8.2954 2 7.7311E-05 6262 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 89.171 67.321 38582000 0 0 0 2244300 1413800 2072000 2346100 2444100 2833500 2444800 7249700 4697300 3112400 2751400 4972200 14135 1349 12876 118638;118639;118640;118641;118642;118643;118644;118645;118646;118647;118648;118649 94771;94772;94773;94774;94775;94776;94777;94778;94779;94780;94781;94782 94772 12 EQVANSAFVER Unmodified 1248.6099 0.6098646 862 P08238;Q58FF7 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 39.564 38.805 2 4.265E-09 46855 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 150.35 121.26 19713000000 0 1590100000 12796000 811430000 582640000 1603500000 1021000000 705410000 699350000 1643500000 2415100000 1745000000 1618900000 1519100000 3744800000 14136 862 12877 118650;118651;118652;118653;118654;118655;118656;118657;118658;118659;118660;118661;118662;118663;118664 94783;94784;94785;94786;94787;94788;94789;94790;94791;94792;94793;94794;94795;94796;94797;94798;94799;94800;94801 94791 19 EQVANSAFVERVRK Unmodified 1631.8744 0.87435256 862 P08238;Q58FF7 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 0 0 2 By MS/MS By MS/MS 2 0 3 1 2 47.864 41.547 3;4 0.022071 56819 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.552 33.35 324110000 290440000 33671000 0 0 0 0 0 0 0 0 0 0 0 0 0 14137 862 12878 118665;118666;118667 94802;94803;94804 94804 1 EQVAQLK Unmodified 814.45487 0.45486751 1052;1054 P17275;P17535;P05412 JUNB;JUND;JUN Transcription factor jun-B;Transcription factor jun-D;Transcription factor AP-1 no no 0 0 0 By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 17.635 17.823 2 0.040879 16353 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 68.398 19.638 136070000 0 0 0 9071600 8141000 10571000 11051000 9021200 7701800 13901000 14328000 13645000 14524000 11382000 12727000 14138 1052;1054 12879 118668;118669;118670;118671;118672;118673;118674;118675;118676;118677;118678;118679 94805;94806 94806 2 EQVDAALGAEEMVEMLTDRNLNLEEK Oxidation (M) 2962.39 0.38996693 2391 Q14203 DCTN1 Dynactin subunit 1 yes yes 0 1 1 By MS/MS 2 0 1 1 98.26 90.13 3 7.8631E-05 116334 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.497 35.378 18253000 18253000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14139 2391 12880 118680 94807 94807 3888;3889 1 EQVDAALGAEEMVEMLTDRNLNLEEK Unmodified 2946.3951 0.39505231 2391 Q14203 DCTN1 Dynactin subunit 1 yes yes 0 0 1 By MS/MS 2 0 1 1 99.574 91.444 3 4.1594E-223 117860 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 228.63 209.62 36641000 36641000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14140 2391 12880 118681 94808 94808 1 EQVEEDNEVSSGLK Unmodified 1561.7108 0.71076044 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.52 35.702 2 2.9908E-16 38255 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 142.07 100.53 100490000 0 0 0 4448200 3441000 5741900 6387400 6911300 6288500 9395800 8047900 10709000 19086000 9090300 10939000 14141 2446 12881 118682;118683;118684;118685;118686;118687;118688;118689;118690;118691;118692;118693 94809;94810;94811;94812;94813;94814;94815;94816;94817;94818;94819;94820 94812 12 EQVEPTPEDEDDDIELR Unmodified 2027.8807 0.88073889 3135 Q86TG7 PEG10 Retrotransposon-derived protein PEG10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 61.029 61.124 2 7.1024E-37 69117 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 146.79 143.21 49398000 0 0 0 4758900 2755000 5354900 2570000 3942900 2177200 4344800 4423100 4962300 0 4780700 9328600 14142 3135 12882 118694;118695;118696;118697;118698;118699;118700;118701;118702;118703;118704 94821;94822;94823;94824;94825;94826;94827;94828;94829;94830;94831;94832 94825 12 EQVETVPQATVK Unmodified 1327.6983 0.69834526 4259 Q9BZ95 WHSC1L1 Histone-lysine N-methyltransferase NSD3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 38.435 38.468 2 0.0037911 42591 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 59.426 38.556 20814000 0 0 0 0 2889600 3901100 3683600 0 2952800 3504500 0 0 0 3882100 0 14143 4259 12883 118705;118706;118707;118708;118709;118710 94833;94834;94835;94836;94837 94835 5 EQVFLVPTGEVFEQQVK Unmodified 1976.0255 0.025493054 2867 Q6BDS2 UHRF1BP1 UHRF1-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.65 1.63 1 22 1 2 2 2 2 2 2 2 2 2 2 2 88.139 88.029 2;3 4.2615E-29 101633 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 134.08 111.54 162410000 0 34726000 0 0 7138700 9931900 5632400 12854000 9113200 15327000 13491000 16745000 6983700 8905200 21563000 14144 2867 12884 118711;118712;118713;118714;118715;118716;118717;118718;118719;118720;118721;118722;118723;118724;118725;118726;118727;118728;118729;118730;118731;118732;118733 94838;94839;94840;94841;94842;94843;94844;94845;94846;94847;94848;94849;94850;94851;94852;94853;94854 94844 17 EQVHQGGVELQQLEAGLQEAGEEDTRLK Unmodified 3090.5218 0.52178446 3403 Q8NBT2 SPC24 Kinetochore protein Spc24 yes yes 0 0 1 By MS/MS 2 0 1 1 89.334 81.204 4 3.6507E-07 105647 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.983 45.276 10286000 10286000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14145 3403 12885 118734 94855 94855 1 EQVLPQLEAFMK Unmodified 1431.7432 0.74318696 4081 Q9BPX7 C7orf25 UPF0415 protein C7orf25 yes yes 0 0 0 By MS/MS 2 0 1 1 95.439 90.574 2 0.0012379 112326 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.441 53.749 11569000 0 11569000 0 0 0 0 0 0 0 0 0 0 0 0 0 14146 4081 12886 118735 94856;94857 94857 2 EQVNDLFSR Unmodified 1106.5356 0.53563702 1977 P78347;Q86UP8;Q6EKJ0 GTF2I;GTF2IRD2;GTF2IRD2B General transcription factor II-I;General transcription factor II-I repeat domain-containing protein 2A;General transcription factor II-I repeat domain-containing protein 2B yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 54.584 54.719 2 0.0032531 62276 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 90.657 73.271 431070000 0 0 0 37585000 35929000 27917000 37372000 20961000 16711000 44254000 36562000 51190000 44398000 39285000 38907000 14147 1977 12887 118736;118737;118738;118739;118740;118741;118742;118743;118744;118745;118746;118747 94858;94859;94860;94861;94862;94863;94864;94865;94866;94867;94868 94859 10 EQVNDLFSRK Unmodified 1234.6306 0.63060004 1977 P78347;Q86UP8;Q6EKJ0 GTF2I;GTF2IRD2;GTF2IRD2B General transcription factor II-I;General transcription factor II-I repeat domain-containing protein 2A;General transcription factor II-I repeat domain-containing protein 2B yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 2 1 1 1 1 1 1 45.336 45.504 2;3 0.00093468 50116 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 69.979 59.26 1809800000 0 0 0 101470000 128300000 135150000 129500000 118100000 130820000 147490000 175770000 161960000 174160000 161190000 245840000 14148 1977 12888 118748;118749;118750;118751;118752;118753;118754;118755;118756;118757;118758;118759;118760 94869;94870;94871;94872;94873;94874;94875;94876;94877;94878;94879;94880 94876 5 EQVPGFTPR Unmodified 1029.5243 0.52434406 953 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 45.962 46.016 2 0.012193 51889 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 100.02 73.055 540900000 0 0 0 48517000 53979000 60994000 0 54577000 44884000 60150000 69833000 0 73885000 74082000 0 14149 953 12889 118761;118762;118763;118764;118765;118766;118767;118768;118769 94881;94882;94883;94884 94884 0 EQVPSGAELER Unmodified 1213.5939 0.59388018 3573 Q8WWI1 LMO7 LIM domain only protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.058 38.238 2 0.00034777 41829 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 88.392 59.993 414380000 0 0 0 26758000 30729000 31528000 33220000 33595000 22867000 40793000 43155000 39852000 36574000 27431000 47874000 14150 3573 12890 118770;118771;118772;118773;118774;118775;118776;118777;118778;118779;118780;118781 94885;94886;94887;94888;94889;94890;94891;94892;94893;94894;94895;94896;94897;94898;94899;94900 94898 16 EQVSEELVR Unmodified 1087.551 0.55095274 2510 Q15276 RABEP1 Rab GTPase-binding effector protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 38.672 39.022 2 0.023114 42882 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 51.193 22.091 39895000 0 0 0 0 0 2561700 0 0 3267400 3756000 0 5250900 3413900 3064100 18581000 14151 2510 12891 118782;118783;118784;118785;118786;118787;118788 94901;94902 94902 2 EQVSPLETTLEK Unmodified 1372.7086 0.70857559 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.276 60.381 2 1.3878E-05 68687 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 128.81 96.491 481220000 0 0 0 27758000 26772000 37984000 39435000 33724000 27919000 41765000 49654000 47061000 40371000 42476000 66303000 14152 3676 12892 118789;118790;118791;118792;118793;118794;118795;118796;118797;118798;118799;118800 94903;94904;94905;94906;94907;94908;94909;94910;94911;94912;94913;94914 94905 12 EQVTNVGGAVVTGVTAVAQK Unmodified 1927.0375 0.037454724 1393 P37840 SNCA Alpha-synuclein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 2 2 24 4 2 2 2 2 2 2 2 2 2 2 2 2 78.325 77.8 2;3 5.2689E-54 89821 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 155.98 139.84 1094300000 0 299980000 0 26012000 73951000 45683000 44683000 52247000 39024000 82596000 82274000 117380000 41922000 49117000 139390000 14153 1393 12893 118801;118802;118803;118804;118805;118806;118807;118808;118809;118810;118811;118812;118813;118814;118815;118816;118817;118818;118819;118820;118821;118822;118823;118824;118825;118826;118827;118828 94915;94916;94917;94918;94919;94920;94921;94922;94923;94924;94925;94926;94927;94928;94929;94930;94931 94918 16 EQVVNETVEK Unmodified 1173.5877 0.58773217 2418 Q14596 NBR1 Next to BRCA1 gene 1 protein yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 24.308 24.745 2 0.024054 25928 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 45.161 22.38 7268000 0 0 0 0 0 0 0 0 0 2132400 2236100 0 0 0 2899500 14154 2418 12894 118829;118830;118831 94932 94932 1 EQVYDAMGEK Unmodified 1168.507 0.50703901 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 33.664 33.921 2 0.0051532 37548 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 70.1 50.314 72221000 0 0 0 0 2299000 2908400 2679400 0 2102300 0 17073000 9505500 4507900 8005700 23141000 14155 1564 12895 118832;118833;118834;118835;118836;118837;118838;118839;118840 94933;94934;94935;94936;94937;94938;94939;94940 94940 8 EQWDTIEELIRK Unmodified 1558.7991 0.79912193 2628 Q16698 DECR1 2,4-dienoyl-CoA reductase, mitochondrial yes yes 0 0 1 By MS/MS 2 0 2 2 65.189 57.813 3 0.0073713 106419 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.034 47.157 19778000 19778000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14156 2628 12896 118841;118842 94941;94942 94942 2 EQWEPVFQNGK Unmodified 1360.6412 0.64116473 2404 Q14331 FRG1 Protein FRG1 yes yes 0 0 0 By MS/MS 10 0 1 1 62.761 62.242 2 0.029474 71577 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 39.022 33.54 3503100 0 0 0 0 3503100 0 0 0 0 0 0 0 0 0 0 14157 2404 12897 118843 94943 94943 1 EQWLNNMQIPEK Unmodified 1528.7344 0.73441319 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 75.894 75.347 2 0.00010416 92994 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.737 81.301 460220000 0 407210000 0 0 0 3702800 2542400 2718300 3234600 5380100 5512600 8734900 3234200 3622800 14330000 14158 2047 12898 118844;118845;118846;118847;118848;118849;118850;118851;118852;118853;118854;118855 94944;94945;94946;94947;94948;94949;94950;94951 94946 8 EQWLNNMQIPEK Oxidation (M) 1544.7293 0.72932781 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 1 0 By MS/MS By MS/MS 5 3.56 1 1 1 2 1 62.865 57.52 2 1.1823E-14 73904 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 144.55 122.5 85363000 0 85363000 0 0 0 0 0 0 0 0 0 0 0 0 0 14159 2047 12898 118856;118857;118858 94952;94953;94954 94953 3318 3 EQYAEMEK Unmodified 1026.4328 0.43281144 3501 Q8TDH9 BLOC1S5 Biogenesis of lysosome-related organelles complex 1 subunit 5 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 19.654 20.125 2 0.028327 19509 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 56.81 29.324 10885000 0 0 0 0 0 0 0 0 0 0 0 2765000 1919800 2410400 3789700 14160 3501 12899 118859;118860;118861;118862 94955 94955 1 EQYAQEHGLNFQR Unmodified 1618.7488 0.7488177 2500 Q15126 PMVK Phosphomevalonate kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.662 43.836 3 4.7451E-07 48942 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 76.073 70.169 265110000 0 0 0 10330000 9161300 29335000 16632000 18408000 15595000 34955000 20561000 25233000 16195000 22266000 46441000 14161 2500 12900 118863;118864;118865;118866;118867;118868;118869;118870;118871;118872;118873;118874 94956;94957;94958;94959;94960;94961;94962;94963;94964;94965 94962 10 EQYEALQEETR Unmodified 1394.6314 0.6313879 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 37.015 37.143 2 0.0088702 40838 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 51.092 43.813 38293000 0 0 0 4061700 2784900 3785600 2635800 0 2455700 5043300 4576900 6462300 4195200 2292000 0 14162 5049 12901 118875;118876;118877;118878;118879;118880;118881;118882;118883;118884 94966;94967;94968;94969 94967 4 EQYEALQEETRVAQK Unmodified 1820.8905 0.89045614 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 50.464 45.143 3 0.012658 58858 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 41.838 30.576 22679000 0 22679000 0 0 0 0 0 0 0 0 0 0 0 0 0 14163 5049 12902 118885;118886 94970 94970 1 EQYEAMAEK Oxidation (M) 1113.4648 0.46483985 76 CON__P19012;P19012 KRT15 Keratin, type I cytoskeletal 15 yes no 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 11.684 11.694 2 0.034888 10672 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 41.429 31.913 + 7178700 0 0 0 3410500 0 0 0 3768100 0 0 0 0 0 0 0 14164 76 12903 118887;118888 94971 94971 1 EQYEAMAEK Unmodified 1097.4699 0.46992522 76 CON__P19012;P19012 KRT15 Keratin, type I cytoskeletal 15 yes no 0 0 0 By MS/MS 10 0 1 1 24.254 24.071 2 0.013982 25537 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 58.981 32.809 + 4211400 0 0 0 4211400 0 0 0 0 0 0 0 0 0 0 0 14165 76 12903 118889 94972 94972 1 EQYEAMAER Unmodified 1125.4761 0.47607323 73;981 CON__P13646-1;P13646;CON__ENSEMBL:ENSP00000377550 KRT13 Keratin, type I cytoskeletal 13 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 27.212 27.409 2 0.013293 29310 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 60.019 50.108 + 117080000 0 0 0 3803900 0 0 39852000 55275000 0 0 0 10196000 7956100 0 0 14166 73;981 12904 118890;118891;118892;118893;118894 94973;94974;94975;94976 94973 4 EQYEAMAER Oxidation (M) 1141.471 0.47098786 73;981 CON__P13646-1;P13646;CON__ENSEMBL:ENSP00000377550 KRT13 Keratin, type I cytoskeletal 13 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 14.102 14.049 2 0.036392 13468 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 75.378 59.716 + 24551000 0 0 0 2547900 2112200 0 0 19891000 0 0 0 0 0 0 0 14167 73;981 12904 118895;118896;118897;118898 94977;94978 94977 92 1 EQYEQILAFVQGTVAEGAPIIPISAQLK Unmodified 3012.6172 0.61718839 1427 P41091;Q2VIR3 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein yes no 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 104.41 97.983 3 9.1579E-22 120907 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.879 80.749 22597000 10056000 12542000 0 0 0 0 0 0 0 0 0 0 0 0 0 14168 1427 12905 118899;118900 94979 94979 1 EQYEQLSQSEK Unmodified 1367.6205 0.62048887 3521 Q8TEW0 PARD3 Partitioning defective 3 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.249 26.449 2 4.1046E-06 27166 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 142.43 135.06 62835000 0 0 0 4010900 4016100 5544400 4573800 3954900 3834700 6859000 6859300 9448800 4222100 4059900 5451200 14169 3521 12906 118901;118902;118903;118904;118905;118906;118907;118908;118909;118910;118911;118912 94980;94981;94982;94983;94984;94985;94986;94987;94988;94989;94990;94991 94983 12 EQYETLSK Unmodified 996.47639 0.47639081 4630 Q9NSV4 DIAPH3 Protein diaphanous homolog 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 21.457 21.64 2 0.036499 22528 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 51.854 40.133 282150000 0 0 0 16373000 14587000 0 23987000 30848000 16971000 30319000 36036000 42201000 37614000 33210000 0 14170 4630 12907 118913;118914;118915;118916;118917;118918;118919;118920;118921;118922 94992;94993;94994 94994 3 EQYGLGPYEAVTPLTK Unmodified 1764.8934 0.89341625 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 79.414 79.593 2 0.00093839 91651 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.528 50.96 17851000 0 0 0 0 0 0 0 0 0 0 6149800 0 0 5512900 6188100 14171 2203 12908 118923;118924;118925 94995 94995 1 EQYGQYALAVR Unmodified 1296.6463 0.64625011 2075 Q02413 DSG1 Desmoglein-1 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 58.119 57.963 2 0.00064837 66101 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 78.334 54.957 28958000 0 0 0 10841000 0 9819200 0 8298200 0 0 0 0 0 0 0 14172 2075 12909 118926;118927;118928 94996;94997 94996 2 EQYNMLGGK Unmodified 1038.4804 0.48043033 2075 Q02413 DSG1 Desmoglein-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching 10 0 8 1 1 1 1 1 1 1 1 37.046 37.088 2 0.026163 41117 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 49.933 23.761 248770000 0 0 0 60165000 19976000 17635000 14370000 67505000 8943800 25585000 0 34591000 0 0 0 14173 2075 12910 118929;118930;118931;118932;118933;118934;118935;118936 94998;94999;95000;95001 94998 3 EQYNMLGGK Oxidation (M) 1054.4753 0.47534495 2075 Q02413 DSG1 Desmoglein-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 19.706 19.908 2 0.0029967 18832 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 86.472 76.005 399390000 0 0 0 61457000 29498000 28317000 20460000 75580000 18632000 28252000 31012000 43667000 29141000 16787000 16585000 14174 2075 12910 118937;118938;118939;118940;118941;118942;118943;118944;118945;118946;118947;118948;118949;118950;118951;118952;118953;118954;118955;118956;118957;118958;118959;118960 95002;95003;95004;95005;95006;95007;95008;95009;95010;95011;95012;95013;95014;95015;95016;95017;95018;95019;95020;95021 95013 3369 14 EQYSTSLAQSEAELK Unmodified 1682.7999 0.79990979 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 59.162 58.435 2 1.0409E-15 73303 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.79 104.44 67000000 0 45061000 0 3161100 0 3433700 2901600 0 0 0 0 4230100 0 2576200 5636500 14175 5049 12911 118961;118962;118963;118964;118965;118966;118967 95022;95023;95024 95023 3 ERAAGGGAGSSEDDAQSR Unmodified 1719.7408 0.74083179 4396 Q9H4A6 GOLPH3 Golgi phosphoprotein 3 yes yes 0 0 1 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 5.965 6.0777 3 0.00034218 4290 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 53.773 47.869 16580000 0 0 0 1145100 644520 1319900 1546200 1060000 0 1666200 3135300 1796200 1032000 1069200 2165300 14176 4396 12912 118968;118969;118970;118971;118972;118973;118974;118975;118976;118977;118978 95025;95026 95025 2 ERACYLSINPQK Unmodified 1477.7347 0.73474754 1837;1444 P61163;P42025 ACTR1A;ACTR1B Alpha-centractin;Beta-centractin no no 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 46.661 45.649 2;3 4.9267E-12 63726 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 140.16 96.882 225710000 71842000 0 0 5266000 4748600 11160000 6687700 10308000 6767100 14962000 20017000 18833000 15303000 11926000 27892000 14177 1837;1444 12913 118979;118980;118981;118982;118983;118984;118985;118986;118987;118988;118989;118990;118991;118992 95027;95028;95029;95030 95029 4 ERAEEIYPIK Unmodified 1246.6558 0.65575216 1584 P49662 CASP4 Caspase-4;Caspase-4 subunit 1;Caspase-4 subunit 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.3 2.1 1 9 1 1 1 1 1 1 1 1 1 1 42.045 41.799 3 0.0036392 53148 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 68.893 52.755 58264000 0 6931400 0 3627500 0 0 4239000 5621600 4857400 0 7178100 6368800 5469400 4253100 9717900 14178 1584 12914 118993;118994;118995;118996;118997;118998;118999;119000;119001;119002 95031;95032;95033;95034;95035;95036;95037 95033 7 ERAIVPLEAR Unmodified 1152.6615 0.66150624 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.364 45.534 3 0.0084426 51303 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 45.077 20.224 162220000 0 0 0 5822200 12552000 8968900 12568000 13028000 11251000 13370000 15641000 21502000 16451000 15467000 15594000 14179 213 12915 119003;119004;119005;119006;119007;119008;119009;119010;119011;119012;119013;119014 95038;95039;95040;95041;95042;95043;95044;95045;95046 95039 9 ERALNSASTSLPTSCPGSEPVPTHQQGQPALELK Unmodified 3586.7686 0.76857345 5273 Q9Y6A5 TACC3 Transforming acidic coiled-coil-containing protein 3 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 74.632 69.025 4 1.5018E-21 85744 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 68.326 66.397 25423000 10919000 0 14505000 0 0 0 0 0 0 0 0 0 0 0 0 14180 5273 12916 119015;119016 95047;95048;95049 95049 3 ERALQGSLGGVEK Unmodified 1342.7205 0.72047768 463 O75150 RNF40 E3 ubiquitin-protein ligase BRE1B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 8.33 3.25 5 19 2 1 2 2 2 2 2 1 2 1 2 1 2 2 35.511 34.58 2;3 0.0005631 36944 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 51.405 38.908 358940000 119500000 18080000 27439000 15150000 11982000 17029000 22326000 3358900 0 20305000 6260800 31303000 5251400 20784000 40170000 14181 463 12917 119017;119018;119019;119020;119021;119022;119023;119024;119025;119026;119027;119028;119029;119030;119031;119032;119033;119034;119035;119036;119037;119038;119039;119040 95050;95051;95052;95053;95054;95055;95056;95057;95058;95059;95060;95061;95062;95063 95059 12 ERAMSTTSISSPQPGK Oxidation (M) 1691.8148 0.81484835 4940 Q9UJU6 DBNL Drebrin-like protein yes yes 0 1 1 By MS/MS 2 0 1 1 24.727 20.599 3 0.0049416 27177 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 46.892 37.234 12941000 0 12941000 0 0 0 0 0 0 0 0 0 0 0 0 0 14182 4940 12918 119041 95064 95064 6282 1 ERAMSTTSISSPQPGK Unmodified 1675.8199 0.81993373 4940 Q9UJU6 DBNL Drebrin-like protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 3 6 1 1 1 1 1 1 1 1 1 32.693 30.958 3 5.1625E-06 39017 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 99.451 85.367 253200000 153700000 24345000 35609000 0 4921500 5276900 0 0 0 10241000 0 0 6472500 0 12635000 14183 4940 12918 119042;119043;119044;119045;119046;119047;119048;119049;119050 95065;95066;95067;95068;95069;95070;95071 95068 7 ERANGMELDGRR Unmodified 1402.6735 0.67354426 1935 P62995 TRA2B Transformer-2 protein homolog beta yes yes 0 0 2 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 15.804 16.103 3 0.033871 14754 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.929 35.367 87060000 0 0 0 0 0 0 7379700 0 0 0 14343000 0 17501000 14277000 33560000 14184 1935 12919 119051;119052;119053;119054;119055 95072;95073 95073 2 ERAPQFQESVGSFR Unmodified 1636.7958 0.79576789 2810 Q5VT52 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 1 2 2 2 2 2 2 2 2 2 55.127 55.261 2;3 5.5981E-14 62644 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 114.21 104.15 563100000 0 0 0 30152000 30696000 25931000 37778000 60768000 41711000 45450000 64423000 74150000 41661000 47194000 63185000 14185 2810 12920 119056;119057;119058;119059;119060;119061;119062;119063;119064;119065;119066;119067;119068;119069;119070;119071;119072;119073;119074;119075;119076;119077;119078 95074;95075;95076;95077;95078;95079;95080;95081;95082;95083;95084;95085;95086;95087;95088;95089;95090;95091;95092;95093;95094;95095 95089 22 ERAPVSGTQEK Unmodified 1200.6099 0.6098646 769 P04049 RAF1 RAF proto-oncogene serine/threonine-protein kinase yes yes 0 0 1 By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 2 1 1 1 2 1 7.0025 7.1548 3 0.0022693 4398 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 48.822 35.814 39854000 0 0 0 0 2354100 3929600 0 3591800 5154000 473630 0 6802500 3934000 4515700 9098500 14186 769 12921 119079;119080;119081;119082;119083;119084;119085;119086;119087;119088;119089 95096;95097;95098 95097 2 ERAQLLVNPK Unmodified 1166.6772 0.6771563 2283 Q13416 ORC2 Origin recognition complex subunit 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 35.547 35.191 2;3 0.0026825 38534 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 65.933 22.627 229450000 24023000 0 0 17379000 12051000 18163000 13628000 12347000 13146000 17101000 18139000 22400000 20300000 23496000 17275000 14187 2283 12922 119090;119091;119092;119093;119094;119095;119096;119097;119098;119099;119100;119101;119102 95099;95100;95101;95102;95103;95104;95105;95106;95107;95108;95109;95110 95104 12 ERASTPYIEK Unmodified 1192.6088 0.60880197 3730 Q969Z0 TBRG4 Protein TBRG4 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 22.22 22.16 3 0.0081913 28711 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 56.404 29.731 141930000 0 0 16670000 0 0 12728000 14269000 13344000 11504000 15753000 0 19840000 13651000 11807000 12360000 14188 3730 12923 119103;119104;119105;119106;119107;119108;119109;119110;119111;119112 95111;95112;95113 95111 3 ERAYVEQIEK Unmodified 1263.6459 0.64591575 4126 Q9BSJ2 TUBGCP2 Gamma-tubulin complex component 2 yes yes 0 0 1 By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS 7.54 3.69 4 9 1 1 2 1 1 1 1 1 1 1 1 1 31.642 30.445 2;3 0.013915 32768 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 36.432 25.954 149320000 3607700 58179000 31198000 5130900 0 5828700 4116600 0 0 8410000 3897000 4882200 8564500 6474600 9026600 14189 4126 12924 119113;119114;119115;119116;119117;119118;119119;119120;119121;119122;119123;119124;119125 95114;95115;95116;95117 95114 2 ERDAQAIFER Unmodified 1233.6102 0.61019895 293 O15541 RNF113A RING finger protein 113A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.996 38.177 3 0.0061665 42265 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 58.274 47.474 123310000 0 0 0 8234100 6798600 7507200 7565800 12227000 6658100 6546400 11648000 17601000 9409500 10571000 18541000 14190 293 12925 119126;119127;119128;119129;119130;119131;119132;119133;119134;119135;119136;119137 95118;95119;95120;95121;95122;95123;95124;95125 95122 8 ERDDILRSLGEISALTSK Unmodified 2002.0695 0.069483134 1073 P18206 VCL Vinculin yes yes 0 0 2 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 92.543 86.871 4 0.0027129 110968 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.633 37.631 13211000 11454000 1757000 0 0 0 0 0 0 0 0 0 0 0 0 0 14191 1073 12926 119138;119139 95126;95127 95127 2 ERDEDDEDGDGDGDGATGK Unmodified 1951.7151 0.71513012 1631 P50579 METAP2 Methionine aminopeptidase 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 6.4857 5.7237 2;3 3.7644E-146 6519 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 220.6 220.6 134880000 20658000 16294000 0 4159200 4096200 8935500 7244100 3587800 6177000 6842800 12903000 9710800 8397900 7340200 18538000 14192 1631 12927 119140;119141;119142;119143;119144;119145;119146;119147;119148;119149;119150;119151;119152;119153;119154;119155;119156 95128;95129;95130;95131;95132;95133;95134;95135;95136;95137;95138;95139;95140;95141;95142;95143 95134 16 ERDEDDEDGDGDGDGATGKK Unmodified 2079.8101 0.81009314 1631 P50579 METAP2 Methionine aminopeptidase 2 yes yes 0 0 2 By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.62 1.7 1 20 1 2 2 1 2 2 1 2 2 1 1 2 2 5.6962 5.8162 2;3;4 1.4973E-10 5879 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 92.457 90.478 93863000 0 0 0 6624100 3892700 1720300 8834900 7503300 1741200 10404000 10087000 7168300 2928800 9943800 23014000 14193 1631 12928 119157;119158;119159;119160;119161;119162;119163;119164;119165;119166;119167;119168;119169;119170;119171;119172;119173;119174;119175;119176;119177 95144;95145;95146;95147 95145 4 ERDFTSLENTVEER Unmodified 1723.8013 0.80130678 2135 Q07065 CKAP4 Cytoskeleton-associated protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 60.235 60.29 3 0.00031036 68595 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 52.599 46.162 69221000 0 0 0 5773300 3954700 10138000 0 6389800 6738600 7819600 6432400 9349800 5659600 6964800 0 14194 2135 12929 119178;119179;119180;119181;119182;119183;119184;119185;119186;119187 95148;95149;95150;95151;95152;95153;95154;95155;95156 95154 9 ERDFYFGK Unmodified 1060.4978 0.49779495 2564;2549 Q15691;Q15555 MAPRE1;MAPRE2 Microtubule-associated protein RP/EB family member 1;Microtubule-associated protein RP/EB family member 2 no no 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 49.734 43.813 2 0.028251 60728 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107 74.109 75925000 69798000 0 6126900 0 0 0 0 0 0 0 0 0 0 0 0 14195 2564;2549 12930 119188;119189 95157 95157 0 ERDGQSSPQPSPR Unmodified 1439.6753 0.6753184 2833 Q5VZK9 LRRC16A Leucine-rich repeat-containing protein 16A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.2007 7.3244 3 0.0027555 5882 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 69.345 61.753 235210000 0 0 0 12216000 10593000 17543000 13297000 14462000 11266000 27244000 38977000 26605000 18193000 18425000 26393000 14196 2833 12931 119190;119191;119192;119193;119194;119195;119196;119197;119198;119199;119200;119201 95158;95159;95160;95161;95162 95161 1 ERDLGMPDGEAALAAK Unmodified 1642.7985 0.79847001 2839 Q63ZY3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 56.345 56.42 3 0.011916 63272 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 30.107 27.473 47858000 0 0 0 2237000 2533700 0 4040800 5779500 2918200 0 7455900 0 6387600 6384600 10121000 14197 2839 12932 119202;119203;119204;119205;119206;119207;119208;119209;119210 95163 95163 1 ERDQGGFGDRNEYGSR Unmodified 1841.8041 0.80410074 3690 Q92945 KHSRP Far upstream element-binding protein 2 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 2 2 2 2 2 1 2 2 2 2 19.544 19.798 3;4 1.1169E-27 19095 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 131.45 119.69 188870000 0 0 0 9544200 0 13476000 0 9763000 12142000 14364000 7342300 37917000 21522000 17834000 44965000 14198 3690 12933 119211;119212;119213;119214;119215;119216;119217;119218;119219;119220;119221;119222;119223;119224;119225;119226;119227;119228;119229 95164;95165;95166;95167;95168;95169;95170;95171 95166 7 ERDSELSDTDSGCCLGQSESDK Unmodified 2473.9809 0.98093999 4002 Q96T88 UHRF1 E3 ubiquitin-protein ligase UHRF1 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 37.767 32.408 3 6.3497E-102 42684 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 142.45 142.44 32866000 10459000 22407000 0 0 0 0 0 0 0 0 0 0 0 0 0 14199 4002 12934 119230;119231;119232 95172;95173;95174;95175 95173 4 ERDVEELQLK Unmodified 1257.6565 0.65648044 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 8.43 3.02 1 2 11 1 2 1 1 1 1 1 1 1 1 1 1 1 42.179 41.147 3 0.0033485 44596 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 70.808 53.372 220960000 316930 58022000 0 13037000 11288000 12315000 11881000 12587000 11149000 12040000 24117000 26385000 12204000 15614000 0 14200 1286 12935 119233;119234;119235;119236;119237;119238;119239;119240;119241;119242;119243;119244;119245;119246 95176;95177;95178;95179;95180;95181;95182 95180 5 EREAELGAK Unmodified 1001.5142 0.5141733 2268 Q13310 PABPC4 Polyadenylate-binding protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 10.487 7.3595 2 0.045103 10048 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.608 27.296 113020000 34607000 52282000 26135000 0 0 0 0 0 0 0 0 0 0 0 0 14201 2268 12936 119247;119248;119249 95183 95183 1 EREAELGAR Unmodified 1029.5203 0.52032131 958 P11940;Q9H361;Q4VXU2 PABPC1;PABPC3;PABPC1L Polyadenylate-binding protein 1;Polyadenylate-binding protein 3;Polyadenylate-binding protein 1-like yes no 0 0 1 By MS/MS 2 0 1 1 12.335 10.071 2 0.030574 12865 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 113.62 45.398 43272000 0 0 43272000 0 0 0 0 0 0 0 0 0 0 0 0 14202 958 12937 119250 95184 95184 0 EREAELGARAK Unmodified 1228.6524 0.65239812 958 P11940;Q9H361 PABPC1;PABPC3 Polyadenylate-binding protein 1;Polyadenylate-binding protein 3 yes no 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 11.751 8.6535 3 0.0034771 13462 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.885 54.124 669240000 638050000 0 31194000 0 0 0 0 0 0 0 0 0 0 0 0 14203 958 12938 119251;119252 95185;95186 95185 2 ERECPTVAPAHSLTK Unmodified 1694.841 0.84100352 5054 Q9UPQ0 LIMCH1 LIM and calponin homology domains-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 1 2 2 2 2 2 2 2 2 2 2 28.072 28.292 3;4 0.00011871 30557 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 86.497 77.669 674160000 0 0 0 31213000 21468000 57000000 46638000 44985000 35444000 76395000 85693000 79037000 55870000 52285000 88132000 14204 5054 12939 119253;119254;119255;119256;119257;119258;119259;119260;119261;119262;119263;119264;119265;119266;119267;119268;119269;119270;119271;119272;119273;119274;119275 95187;95188;95189;95190;95191;95192;95193;95194;95195;95196;95197;95198;95199;95200 95198 11 EREDEELNNPMK Unmodified 1502.6671 0.66712148 4205 Q9BW85 CCDC94 Coiled-coil domain-containing protein 94 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.69 2 2 6 4 1 1 1 1 1 1 32.577 30.799 2;3 0.00026741 33608 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 65.179 53.387 78585000 0 31632000 0 8028800 0 6428100 8466400 0 0 0 8909600 0 8287100 6833000 0 14205 4205 12940 119276;119277;119278;119279;119280;119281;119282;119283;119284;119285 95201;95202;95203;95204;95205;95206;95207;95208 95207 7 EREDGKEDEGGNEEEAGK Unmodified 1976.8195 0.81953562 2003 P82970 HMGN5 High mobility group nucleosome-binding domain-containing protein 5 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.58 3.57 4 2 13 2 3 1 1 1 1 2 2 2 2 2 6.0204 5.2724 3;4 6.526E-250 6101 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 222.6 217.39 173290000 52189000 21627000 6596200 0 686330 0 0 0 605160 2729400 16175000 18089000 2712200 13344000 38537000 14206 2003 12941 119286;119287;119288;119289;119290;119291;119292;119293;119294;119295;119296;119297;119298;119299;119300;119301;119302;119303;119304 95209;95210;95211;95212;95213;95214;95215 95212 7 EREETRVLNGTVEEEDPYQGTIVLATVK Unmodified 3174.6045 0.60445146 4049 Q99707 MTR Methionine synthase yes yes 0 0 2 By MS/MS 2 0 1 1 84.455 76.325 4 3.492E-06 99734 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 41.734 34.858 14309000 14309000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14207 4049 12942 119305 95216 95216 1 EREGLENDLK Unmodified 1201.5939 0.59388018 3549 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 25.731 25.103 3 0.0047923 26677 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 48.561 23.034 471050000 206770000 0 49802000 18993000 12923000 0 21399000 0 8665000 26415000 27393000 28925000 0 18900000 50856000 14208 3549 12943 119306;119307;119308;119309;119310;119311;119312;119313;119314;119315;119316 95217;95218;95219;95220;95221;95222;95223;95224;95225;95226 95220 9 EREGPSLGPPPVASALSR Unmodified 1818.9588 0.95881047 463 O75150 RNF40 E3 ubiquitin-protein ligase BRE1B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.256 70.331 3 0.00024454 80743 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 56.424 45.48 101390000 0 0 0 6074700 6913000 7343700 8878900 9823100 8150400 8674500 6456700 11665000 10489000 9025100 7896600 14209 463 12944 119317;119318;119319;119320;119321;119322;119323;119324;119325;119326;119327;119328 95227;95228;95229;95230;95231;95232;95233;95234;95235;95236;95237;95238;95239;95240 95234 14 EREHNFQPGDNVEVCEGELINLQGK Unmodified 2910.3566 0.35663339 136 O00267 SUPT5H Transcription elongation factor SPT5 yes yes 0 0 1 By MS/MS 2 0 1 1 80.487 72.356 4 6.4315E-38 94979 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.426 76.976 24995000 24995000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14210 136 12945 119329 95241 95241 1 ERELEEARK Unmodified 1158.5993 0.59929991 5187;5201 Q9Y490;Q9Y4G6 TLN1;TLN2 Talin-1;Talin-2 no no 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6.8726 6.3727 3 0.025559 4484 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 72.325 27.462 288930000 32297000 7960000 106070000 7404200 6242900 15078000 12477000 5985600 10639000 17559000 13693000 14217000 6877800 9306600 23124000 14211 5187;5201 12946 119330;119331;119332;119333;119334;119335;119336;119337;119338;119339;119340;119341;119342;119343;119344 95242;95243;95244;95245;95246;95247;95248 95245 6 ERELEECQR Unmodified 1247.5564 0.55644882 5029 Q9UNE7 STUB1 E3 ubiquitin-protein ligase CHIP yes yes 0 0 1 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 9.7028 9.8998 3 0.0029124 7683 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.173 29.192 12611000 0 0 0 0 0 1280300 0 0 704530 0 0 3047500 1094200 2612200 3872100 14212 5029 12947 119345;119346;119347;119348;119349;119350 95249;95250;95251;95252 95249 4 ERELEEQEK Unmodified 1188.5622 0.5622457 3903 Q96K76 USP47 Ubiquitin carboxyl-terminal hydrolase 47 yes yes 0 0 1 By matching By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 9.4837 6.3268 2;3 0.0033917 9147 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.35 19.155 39727000 3515700 34644000 1567600 0 0 0 0 0 0 0 0 0 0 0 0 14213 3903 12948 119351;119352;119353;119354 95253;95254 95253 1 ERELELLPPPPQQK Unmodified 1672.9148 0.91482039 4268 Q9BZJ0 CRNKL1 Crooked neck-like protein 1 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 65.433 65.764 3 0.02324 74479 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 29.981 13.296 13919000 0 0 0 0 0 0 0 0 0 0 992710 3765400 1780500 2782500 4597800 14214 4268 12949 119355;119356;119357;119358;119359 95255;95256;95257 95255 2 ERELELQK Unmodified 1043.5611 0.56112349 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.33 0.471 2 1 1 1 1 27.262 23.015 2 0.028641 29298 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 128.61 2.3296 75747000 9022000 11514000 55210000 0 0 0 0 0 0 0 0 0 0 0 0 14215 2344 12950 119360;119361;119362 95258;95259 95259 1 ERELHEAYK Unmodified 1173.5778 0.57783619 5054 Q9UPQ0 LIMCH1 LIM and calponin homology domains-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 9.956 10.135 3 0.019123 8305 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.998 26.357 40883000 0 0 0 3790600 0 0 0 0 2756900 4987200 0 10295000 4996700 5607900 8448600 14216 5054 12951 119363;119364;119365;119366;119367;119368;119369 95260;95261;95262;95263 95262 4 ERELQHAALGGTATR Unmodified 1608.8332 0.83321603 220 O14828 SCAMP3 Secretory carrier-associated membrane protein 3 yes yes 0 0 1 By MS/MS By MS/MS By matching 10 0 3 1 1 1 24.254 24.481 3 0.03698 26246 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 34.82 23.874 15446000 0 0 0 0 0 0 4026800 0 0 0 0 0 7264700 4154200 0 14217 220 12952 119370;119371;119372 95264 95264 0 ERELTAQIAAGR Unmodified 1313.7052 0.70516197 4653 Q9NUQ8 ABCF3 ATP-binding cassette sub-family F member 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 36.265 36.465 3 0.0019741 39115 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 45.891 29.259 51720000 0 0 0 0 5725900 0 0 0 5150900 6966700 0 0 10408000 9429000 14039000 14218 4653 12953 119373;119374;119375;119376;119377;119378;119379 95265;95266;95267;95268;95269;95270;95271 95269 7 ERENLRQEIEK Unmodified 1442.7478 0.74775506 1029 P15924 DSP Desmoplakin yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 21.898 22.096 3 0.0050273 23062 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 79.82 39.754 271010000 0 0 0 53553000 0 19584000 17950000 85798000 17781000 13698000 18299000 20145000 24202000 0 0 14219 1029 12954 119380;119381;119382;119383;119384;119385;119386;119387;119388 95272;95273;95274;95275;95276;95277 95275 2 EREQELFNRIEK Unmodified 1589.8162 0.81616898 3618 Q92541 RTF1 RNA polymerase-associated protein RTF1 homolog yes yes 0 0 2 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 45.338 45.716 3 0.017798 49979 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.009 31.17 43269000 0 0 0 0 0 11015000 0 0 0 0 0 0 13103000 0 19151000 14220 3618 12955 119389;119390;119391 95278 95278 1 EREQLGSDQTNLFPK Unmodified 1760.8693 0.86932676 3392 Q8NBF6 AVL9 Late secretory pathway protein AVL9 homolog yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 56.08 55.888 3 0.0060186 70469 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 49.482 38.694 36738000 0 0 9115900 0 0 3318500 0 2461900 0 3885100 4746400 3893000 4387800 0 4928900 14221 3392 12956 119392;119393;119394;119395;119396;119397;119398;119399 95279;95280;95281 95280 3 EREQQDLEFAK Unmodified 1391.6681 0.66810776 308 O43242 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 32.768 33.024 3 0.00088106 35400 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.632 64.677 87878000 0 0 0 0 8489400 10967000 0 4159200 0 16129000 18097000 24030000 0 0 6006400 14222 308 12957 119400;119401;119402;119403;119404;119405;119406 95282;95283;95284;95285 95284 4 EREQQIEEHR Unmodified 1352.6433 0.64328999 2621 Q16643 DBN1 Drebrin yes yes 0 0 1 By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 6.8808 7.0449 3 0.043504 5312 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.44 36.172 65571000 0 0 0 2916400 0 0 4289900 0 4392300 7716200 12856000 5897200 9966600 7185400 10351000 14223 2621 12958 119407;119408;119409;119410;119411;119412;119413;119414;119415 95286;95287 95287 0 ERESLQQMAEVTR Unmodified 1575.7675 0.76750423 996 P14314 PRKCSH Glucosidase 2 subunit beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.178 48.34 3 4.681E-05 54487 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 87.18 65.267 438990000 0 0 0 16048000 9735700 19926000 14948000 23328000 12834000 27257000 56205000 54573000 31774000 48472000 123890000 14224 996 12959 119416;119417;119418;119419;119420;119421;119422;119423;119424;119425;119426;119427 95288;95289;95290;95291;95292;95293;95294;95295;95296;95297;95298;95299;95300;95301;95302;95303;95304;95305;95306;95307;95308 95298 21 ERESLQQMAEVTR Oxidation (M) 1591.7624 0.76241885 996 P14314 PRKCSH Glucosidase 2 subunit beta yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 27.097 27.405 3 0.0022703 29578 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 47.037 26.084 101850000 0 0 0 9415200 0 0 0 0 0 0 33912000 0 0 17801000 40726000 14225 996 12959 119428;119429;119430;119431 95309;95310;95311 95311 1347 2 ERETEAAQMEHQK Unmodified 1585.7155 0.71546866 3992 Q96SN8 CDK5RAP2 CDK5 regulatory subunit-associated protein 2 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 9.8432 9.7576 3 0.0013976 12676 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 75.483 69.999 23350000 0 0 6021700 962640 905580 1314500 1746600 905850 780990 1644400 0 2530600 1874000 1618500 3044300 14226 3992 12960 119432;119433;119434;119435;119436;119437;119438;119439;119440;119441;119442;119443 95312;95313;95314 95314 3 ERETEAAQMEHQK Oxidation (M) 1601.7104 0.71038328 3992 Q96SN8 CDK5RAP2 CDK5 regulatory subunit-associated protein 2 yes yes 0 1 1 By MS/MS 2 0 1 1 5.7971 3.5921 3 2.467E-06 5252 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 102.9 88.217 20764000 0 0 20764000 0 0 0 0 0 0 0 0 0 0 0 0 14227 3992 12960 119444 95315 95315 5468 1 ERETVPVELEPK Unmodified 1424.7511 0.75110911 2063 Q01804 OTUD4 OTU domain-containing protein 4 yes yes 0 0 1 By MS/MS 10 0 1 1 49.706 49.928 3 0.050702 55769 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 29.805 15.452 11433000 0 0 0 0 0 0 0 0 0 0 0 0 0 11433000 0 14228 2063 12961 119445 95316 95316 1 EREVHILEEK Unmodified 1280.6725 0.67246486 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 1 By matching By MS/MS By MS/MS 10 0 3 1 1 1 27.531 27.878 3 0.0056593 29286 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 50.149 31.192 14556000 0 0 0 0 0 3879500 0 0 0 0 0 10676000 0 0 0 14229 2291 12962 119446;119447;119448 95317;95318 95318 2 ERFDPTQFQDCIIQGLTETGTDLEAVAK Unmodified 3181.5238 0.52375829 3043 Q7L1Q6 BZW1 Basic leucine zipper and W2 domain-containing protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 100.53 95.816 3 4.0793E-31 118431 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.411 86.918 19766000 0 19766000 0 0 0 0 0 0 0 0 0 0 0 0 0 14230 3043 12963 119449 95319;95320 95319 2 ERFDSNCITPGTEFMDNLAK Unmodified 2344.0464 0.046381205 4323 Q9H0D6 XRN2 5'-3' exoribonuclease 2 yes yes 0 0 1 By MS/MS 2 0 1 1 83.603 81.161 3 0.016268 98368 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 29.766 22.665 2490600 0 0 2490600 0 0 0 0 0 0 0 0 0 0 0 0 14231 4323 12964 119450 95321 95321 1 ERFENSNIGTAGASDVHVTSKPVDK Unmodified 2657.3045 0.30452146 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 0 2 By MS/MS 2 0 1 1 52.894 44.879 5 0.028219 61885 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 16.666 9.5541 7597300 7597300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14232 2193 12965 119451 95322 95322 1 ERFGIVTSSAGTGTTEDTEAK Unmodified 2156.0233 0.023320802 2004 P82979 SARNP SAP domain-containing ribonucleoprotein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49.745 48.678 3 1.4181E-86 61130 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 157.28 157.28 801090000 54189000 26443000 100050000 21172000 19707000 34416000 33561000 25025000 25561000 55574000 80650000 113080000 32681000 45690000 133280000 14233 2004 12966 119452;119453;119454;119455;119456;119457;119458;119459;119460;119461;119462;119463;119464;119465;119466 95323;95324;95325;95326;95327;95328;95329;95330;95331;95332;95333;95334;95335;95336;95337;95338;95339;95340;95341;95342 95335 20 ERGADLVVIEGMGR Unmodified 1500.7719 0.77186132 4666 Q9NVE7 PANK4 Pantothenate kinase 4 yes yes 0 0 1 By matching By MS/MS By MS/MS 10 0 3 1 1 1 69.631 69.245 3 0.0029266 79341 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 45.864 40.021 9795900 0 0 0 1423800 2133000 6239000 0 0 0 0 0 0 0 0 0 14234 4666 12967 119467;119468;119469 95343;95344 95343 2 ERGADLVVIEGMGR Oxidation (M) 1516.7668 0.76677595 4666 Q9NVE7 PANK4 Pantothenate kinase 4 yes yes 0 1 1 By MS/MS By MS/MS By matching 10 0 3 1 1 1 52.622 52.525 3 0.013469 58979 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 40.801 36 44550000 0 0 0 0 16238000 26341000 0 1970800 0 0 0 0 0 0 0 14235 4666 12967 119470;119471;119472 95345 95345 6077 0 ERGDYVLAVK Unmodified 1148.619 0.61897272 487 O75369 FLNB Filamin-B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.71 3.56 4 1 12 1 2 2 1 1 1 1 1 1 1 1 1 1 1 1 42.439 41.042 2;3 0.0033322 52053 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 70.1 56.722 268840000 37986000 32139000 101340000 3041000 2671900 9849800 5691900 1755800 4667900 8098400 13667000 12363000 7595200 9164500 18808000 14236 487 12968 119473;119474;119475;119476;119477;119478;119479;119480;119481;119482;119483;119484;119485;119486;119487;119488;119489 95346;95347;95348;95349;95350;95351;95352;95353;95354;95355;95356;95357;95358;95359;95360;95361 95353 15 ERGPSAAEVFK Unmodified 1189.6091 0.60913632 3164 Q86V97;Q8WVZ9 KBTBD6;KBTBD7 Kelch repeat and BTB domain-containing protein 6;Kelch repeat and BTB domain-containing protein 7 yes no 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 42.695 37.487 3 0.011255 46671 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 44.612 22.918 68696000 45466000 10110000 13120000 0 0 0 0 0 0 0 0 0 0 0 0 14237 3164 12969 119490;119491;119492 95362;95363 95363 2 ERGTVLAEDQLAQMSK Unmodified 1774.8883 0.88834765 3862 Q96H20 SNF8 Vacuolar-sorting protein SNF8 yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By matching 10 0 5 1 1 1 1 1 60.411 60.559 3 0.016483 69273 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 21.668 7.3915 19092000 0 0 0 0 0 4935500 0 3119200 2213200 0 0 0 4652300 4171300 0 14238 3862 12970 119493;119494;119495;119496;119497 95364 95364 1 ERGTVYFK Unmodified 998.51853 0.5185304 2080 Q02790 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 29.893 25.481 2 0.027326 35601 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 131.03 50.802 2120000000 2045700000 0 74296000 0 0 0 0 0 0 0 0 0 0 0 0 14239 2080 12971 119498;119499 95365 95365 0 ERHDAIFRK Unmodified 1170.6258 0.62578944 1974 P78344 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 0 0 2 By MS/MS By MS/MS 10 0 2 1 1 12.552 12.953 3 0.027874 11830 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 67.081 59.435 28053000 0 0 0 0 0 0 0 0 0 0 0 13532000 0 0 14521000 14240 1974 12972 119500;119501 95366;95367 95367 0 ERHIDALEDK Unmodified 1224.6099 0.6098646 1614 P49959 MRE11A Double-strand break repair protein MRE11A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching 8.29 3.28 3 11 2 1 1 1 1 1 1 1 1 1 1 1 1 21.412 20.64 3 0.00095944 21217 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 91.215 75.657 398910000 27070000 0 13172000 0 8537400 30116000 16208000 20513000 29790000 30116000 39185000 42853000 48969000 34928000 57457000 14241 1614 12973 119502;119503;119504;119505;119506;119507;119508;119509;119510;119511;119512;119513;119514;119515 95368;95369;95370;95371;95372;95373;95374;95375;95376;95377 95373 9 ERHPGSFDVVHVK Unmodified 1505.7739 0.77391024 1905 P62701;P22090 RPS4X;RPS4Y1 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 1 yes no 0 0 1 By MS/MS 10 0 1 1 34.813 35.541 3 0.00012295 38085 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.692 71.899 26782000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26782000 14242 1905 12974 119516 95378;95379 95379 2 ERHQVQLLGR Unmodified 1234.6895 0.68945232 4168 Q9BUQ8 DDX23 Probable ATP-dependent RNA helicase DDX23 yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 26.603 27.289 3 0.012036 28058 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.008 73.495 41516000 0 0 0 0 0 0 0 0 0 0 0 21147000 0 0 20369000 14243 4168 12975 119517;119518 95380 95380 0 ERHTQLEQMFR Unmodified 1473.7147 0.7146808 5146 Q9Y3A5 SBDS Ribosome maturation protein SBDS yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 45.407 45.947 3 0.0046771 50478 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.258 43.092 19994000 0 0 0 0 0 0 0 0 0 0 0 0 3086800 0 16908000 14244 5146 12976 119519;119520 95381;95382 95382 2 ERHVSIQEAESYAESVGAK Unmodified 2089.0076 0.0076111585 4984 Q9UL25 RAB21 Ras-related protein Rab-21 yes yes 0 0 1 By MS/MS 2 0 1 1 75.841 67.711 3 1.752E-14 89320 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 106.49 101.04 16175000 16175000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14245 4984 12977 119521 95383 95383 1 ERIAGLEEEK Unmodified 1172.6037 0.60371659 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 27.901 27.467 3 0.0058438 35343 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 72.152 32.53 39218000 0 0 8724100 3793300 3404600 5766700 0 0 0 6208900 0 0 6546600 4774100 0 14246 2446 12978 119522;119523;119524;119525;119526;119527;119528 95384;95385 95384 2 ERIDFLPHYDTLVK Unmodified 1744.9148 0.91482039 28 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 0 0 1 By MS/MS 3 0 1 1 82.185 78.912 4 0.038813 94593 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 24.964 19.753 2076500 0 2076500 0 0 0 0 0 0 0 0 0 0 0 0 0 14247 28 12979 119529 95386 95386 1 ERIDTRNELESYAYSLK Unmodified 2086.0331 0.033097628 932 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS 3 2.3 1 5 4 1 5 4 1 1 79.046 75.59 3;4 1.3424E-50 95395 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 162.65 127.74 553110000 375720000 161770000 3117600 0 0 0 0 0 0 0 0 0 0 0 12502000 14248 932 12980 119530;119531;119532;119533;119534;119535;119536;119537;119538;119539;119540 95387;95388;95389;95390;95391;95392;95393;95394;95395;95396;95397;95398;95399 95394 11 ERIEIEQNYAK Unmodified 1391.7045 0.70449327 2766 Q5T0N5 FNBP1L Formin-binding protein 1-like yes yes 0 0 1 By MS/MS 2 0 1 1 41.803 38.136 3 0.0012906 48077 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 84.479 65.749 48904000 0 0 48904000 0 0 0 0 0 0 0 0 0 0 0 0 14249 2766 12981 119541 95400 95400 1 ERILQEHEQIK Unmodified 1421.7627 0.76267685 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27.629 27.111 3 0.00031128 36737 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 84.718 54.782 296740000 105240000 0 9167800 11823000 6667000 19203000 10683000 9612600 12813000 14829000 13251000 28674000 12987000 17253000 24536000 14250 2378 12982 119542;119543;119544;119545;119546;119547;119548;119549;119550;119551;119552;119553;119554;119555 95401;95402;95403;95404;95405;95406;95407;95408;95409;95410 95408 8 ERILTDHQK Unmodified 1138.6095 0.60947067 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 8.9385 9.0776 3 0.0063751 7841 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 59.426 14.265 48620000 0 0 0 0 3622600 4816900 6025600 3961400 3164000 3840200 414730 12421000 5609000 4744600 0 14251 2804 12983 119556;119557;119558;119559;119560;119561;119562;119563;119564;119565 95411;95412;95413;95414;95415;95416 95411 4 ERIQPEDMFVCDINEK Unmodified 2021.9187 0.9186615 3860 Q96GX9 APIP Methylthioribulose-1-phosphate dehydratase yes yes 0 0 1 By MS/MS 2 0 1 1 80.874 72.743 3 0.018216 95432 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 36.127 27.418 18862000 18862000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14252 3860 12984 119566 95417 95417 1 ERIQPEDMFVCDINEK Oxidation (M) 2037.9136 0.91357612 3860 Q96GX9 APIP Methylthioribulose-1-phosphate dehydratase yes yes 0 1 1 By MS/MS 2 0 1 1 67.503 63.759 3 0.00016849 79137 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 87.429 73.801 10323000 0 0 10323000 0 0 0 0 0 0 0 0 0 0 0 0 14253 3860 12984 119567 95418;95419 95418 5370 2 ERIQQFDDGGSDEEDIWEEK Unmodified 2424.0353 0.035342052 2727 Q5H9R7 PPP6R3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 yes yes 0 0 1 By MS/MS 2 0 1 1 74.921 66.791 3 6.237E-30 88227 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 118.54 110.59 14464000 14464000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14254 2727 12985 119568 95420 95420 1 ERISEQTYQLSR Unmodified 1508.7583 0.75831975 1857 P61764 STXBP1 Syntaxin-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 37.158 37.501 3 0.013749 40327 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.785 21.129 59843000 0 0 0 0 0 16893000 0 0 0 9605200 16869000 0 0 0 16475000 14255 1857 12986 119569;119570;119571;119572 95421;95422 95422 1 ERISVAAASK Unmodified 1030.5771 0.57710791 1231 P28074 PSMB5 Proteasome subunit beta type-5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 22.879 18.945 2 6.7384E-05 26679 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 136.02 60.81 1090400000 1010800000 38027000 41536000 0 0 0 0 0 0 0 0 0 0 0 0 14256 1231 12987 119573;119574;119575 95423;95424 95423 2 ERIYLEENPEK Unmodified 1418.7042 0.70415892 4778 Q9NZN5 ARHGEF12 Rho guanine nucleotide exchange factor 12 yes yes 0 0 1 By MS/MS 2 0 1 1 42.685 38.963 3 0.0050449 49288 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 54.023 42.315 6839000 0 0 6839000 0 0 0 0 0 0 0 0 0 0 0 0 14257 4778 12988 119576 95425 95425 1 ERLAAFYGV Unmodified 1024.5342 0.53418046 3692;215 Q92973;O14787 TNPO1;TNPO2 Transportin-1;Transportin-2 no no 0 0 1 By MS/MS 3 0 1 1 76.843 73.364 2 0.041603 88153 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 96.492 69.53 54721000 0 54721000 0 0 0 0 0 0 0 0 0 0 0 0 0 14258 3692;215 12989 119577 95426 95426 0 ERLAILGIHNEVSK Unmodified 1577.8889 0.88893999 971 P12814 ACTN1 Alpha-actinin-1 yes yes 0 0 1 By MS/MS 10 0 1 1 59.194 59.787 4 0.0088897 67248 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.318 39.785 13113000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13113000 14259 971 12990 119578 95427 95427 0 ERLDPETLESLGLIK Unmodified 1711.9356 0.93561541 3465 Q8NI27 THOC2 THO complex subunit 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 3.8 3.12 3 1 1 1 2 1 1 89.365 85.659 3 0.0047904 108145 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.395 42.608 76402000 41553000 26579000 1862500 0 0 0 0 0 0 0 0 0 0 0 6407800 14260 3465 12991 119579;119580;119581;119582;119583 95428;95429;95430;95431;95432 95432 5 ERLDQPMTEIVSR Oxidation (M) 1588.7879 0.78790532 1137 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 2 40.62 40.485 2;3 0.00015648 43838 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.639 63.065 146310000 0 0 18549000 13999000 7965200 2953000 2667300 0 0 25360000 6416700 6981900 0 3957400 57462000 14261 1137 12992 119584;119585;119586;119587;119588;119589;119590;119591;119592;119593;119594 95433;95434;95435;95436;95437;95438;95439;95440 95435 1631 7 ERLDQPMTEIVSR Unmodified 1572.793 0.7929907 1137 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 59.546 59.332 2;3 1.1741E-06 66616 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 118.61 94.756 123320000 0 0 29515000 0 0 6253500 2966900 3476600 0 6632100 12040000 0 7296000 7243400 47897000 14262 1137 12992 119595;119596;119597;119598;119599;119600;119601;119602;119603;119604 95441;95442;95443;95444 95441 4 ERLDQPMTEIVSRVSK Unmodified 1886.9884 0.98839604 1137 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 2 By MS/MS 2 0 1 1 79.104 70.973 4 0.0062863 93240 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.913 35.451 17422000 17422000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14263 1137 12993 119605 95445 95445 1 ERLEQDLQQMQAK Unmodified 1615.7988 0.79880436 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 6.8 3.92 4 6 2 2 1 2 1 1 1 51.631 49.393 2;3 1.5473E-12 54693 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 117.25 80.726 159310000 0 36127000 24796000 0 0 0 0 0 0 18799000 24162000 0 0 17686000 37738000 14264 965 12994 119606;119607;119608;119609;119610;119611;119612;119613;119614;119615 95446;95447;95448;95449;95450;95451;95452;95453 95453 7 ERLEQDLQQMQAK Oxidation (M) 1631.7937 0.79371898 965 P12270 TPR Nucleoprotein TPR yes yes 0 1 1 By MS/MS 2 0 1 1 33.883 30.577 3 1.5235E-08 38697 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 108.72 97.103 28229000 0 0 28229000 0 0 0 0 0 0 0 0 0 0 0 0 14265 965 12994 119616 95454;95455;95456 95455 1264 3 ERLEQELALEER Unmodified 1513.7736 0.77363546 4800 Q9P0W2 HMG20B SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related yes yes 0 0 1 By MS/MS 10 0 1 1 56.47 56.661 3 0.032164 63561 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 42.426 29.865 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14266 4800 12995 119617 95457 95457 1 ERLEQEQLER Unmodified 1328.6684 0.66844211 3371 Q8N8S7 ENAH Protein enabled homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 24.965 25.405 3 0.005077 25738 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.944 18.504 62148000 0 0 0 0 0 0 0 0 5174000 0 7412800 8973600 9417300 13543000 17627000 14267 3371 12996 119618;119619;119620;119621;119622;119623 95458;95459;95460;95461;95462 95458 3 ERLESLNIQR Unmodified 1256.6837 0.68369824 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.892 43.067 3 0.00084299 48277 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 94.616 73.244 365620000 0 0 0 20326000 15026000 22546000 25625000 22905000 18954000 25217000 43129000 37075000 43518000 36098000 55199000 14268 2378 12997 119624;119625;119626;119627;119628;119629;119630;119631;119632;119633;119634;119635 95463;95464;95465;95466;95467;95468;95469;95470;95471;95472;95473;95474;95475 95464 13 ERLESLNIQREK Unmodified 1513.8213 0.82125436 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 2 By MS/MS 2 0 1 1 44.698 37.832 3 0.010902 51857 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.082 61.291 32220000 32220000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14269 2378 12998 119636 95476 95476 0 ERLGLTEIRK Unmodified 1213.7143 0.71427009 3579 Q8WWY3 PRPF31 U4/U6 small nuclear ribonucleoprotein Prp31 yes yes 0 0 2 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.097 36.277 3 0.015305 39843 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 70.675 53.683 446710000 0 0 0 27047000 11735000 41537000 29763000 28579000 36882000 33983000 27289000 49981000 59931000 32739000 67239000 14270 3579 12999 119637;119638;119639;119640;119641;119642;119643;119644;119645;119646;119647;119648 95477;95478;95479;95480;95481 95477 2 ERLGMSADPDNEDATDK Unmodified 1862.7952 0.79523512 464 O75152 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 32.461 32.103 3 1.7627E-18 35058 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 99.891 82.402 165690000 7472300 0 0 9990200 10834000 14015000 0 14196000 11359000 15106000 24302000 17314000 14522000 11343000 15231000 14271 464 13000 119649;119650;119651;119652;119653;119654;119655;119656;119657;119658;119659;119660;119661 95482;95483;95484;95485;95486;95487;95488;95489;95490;95491;95492;95493;95494;95495;95496;95497 95488 15 ERLGPVPSSTIEPAEAQSASSDLPQNVTK Unmodified 3007.5098 0.50982279 2786 Q5T8P6 RBM26 RNA-binding protein 26 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 73.538 73.477 3 3.7916E-32 84902 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 83.165 71.423 17119000 0 0 0 0 7999500 0 0 0 0 0 0 9119300 0 0 0 14272 2786 13001 119662;119663 95498;95499;95500 95498 3 ERLGTGGFGNVIR Unmodified 1374.7368 0.73679645 227 O14920 IKBKB Inhibitor of nuclear factor kappa-B kinase subunit beta yes yes 0 0 1 By MS/MS By matching By matching By MS/MS 10 0 4 1 1 1 1 56.804 57.185 3 0.049845 64264 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 28.433 12.894 16251000 0 0 0 0 0 0 0 0 0 1933200 0 3787700 0 2798600 7731500 14273 227 13002 119664;119665;119666;119667 95501 95501 1 ERLMDVMAK 2 Oxidation (M) 1123.5366 0.536565 2202 Q12874 SF3A3 Splicing factor 3A subunit 3 yes yes 0 2 1 By MS/MS 2 0 1 1 20.608 15.884 2 0.032388 23025 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 92.051 48.928 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14274 2202 13003 119668 95502 95502 1 ERLMDVMAK Oxidation (M) 1107.5417 0.54165038 2202 Q12874 SF3A3 Splicing factor 3A subunit 3 yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 34.845 29.995 2 0.027716 42157 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 105.94 71.763 29406000 25996000 0 3410300 0 0 0 0 0 0 0 0 0 0 0 0 14275 2202 13003 119669;119670 95503 95503 0 ERLTEELK Unmodified 1016.5502 0.55022446 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 32.156 28.217 2 0.040151 35492 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 105.57 9.3148 100930000 0 39457000 61475000 0 0 0 0 0 0 0 0 0 0 0 0 14276 2431 13004 119671;119672 95504 95504 0 ERMLYSSCK Unmodified 1172.5318 0.53181397 2190;2884 Q12792;Q6IBS0 TWF1;TWF2 Twinfilin-1;Twinfilin-2 no no 0 0 1 By MS/MS 2 0 1 1 24.699 19.621 3 0.038003 27901 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.276 34.605 46111000 46111000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14277 2190;2884 13005 119673 95505 95505 1 ERMTELYDYPK Unmodified 1443.6704 0.67041595 1533 P48147 PREP Prolyl endopeptidase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 58.097 52.397 3 0.00029248 65334 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 83.182 69.219 89979000 17428000 42091000 30459000 0 0 0 0 0 0 0 0 0 0 0 0 14278 1533 13006 119674;119675;119676;119677 95506;95507;95508;95509;95510;95511;95512;95513 95513 8 ERMTELYDYPK Oxidation (M) 1459.6653 0.66533057 1533 P48147 PREP Prolyl endopeptidase yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2.67 0.471 1 2 1 1 1 44.504 39.861 3 0.0037137 49702 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 68.536 57.589 51542000 359030 19955000 31228000 0 0 0 0 0 0 0 0 0 0 0 0 14279 1533 13006 119678;119679;119680 95514;95515;95516 95515 2432 2 ERNGLSLAALK Unmodified 1170.6721 0.67207093 1037 P16401 HIST1H1B Histone H1.5 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 52.918 53.265 3 0.00020018 58745 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.548 49.821 156200000 0 0 0 0 0 0 7464100 8146500 0 0 0 50766000 13988000 15070000 60769000 14280 1037 13007 119681;119682;119683;119684;119685;119686;119687 95517;95518;95519;95520;95521;95522 95518 6 ERNPPLAEALLSGDLEK Unmodified 1850.9738 0.97379183 2796 Q5TDH0 DDI2 Protein DDI1 homolog 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 4 3.46 3 1 1 1 1 1 87.715 83.897 3 0.00029284 106814 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.01 67.041 38550000 15866000 14471000 3364200 0 0 0 0 0 0 0 0 0 0 0 4848700 14281 2796 13008 119688;119689;119690;119691 95523;95524;95525;95526;95527 95526 5 ERNQNEALLQAIK Unmodified 1525.8213 0.82125436 692 O95801 TTC4 Tetratricopeptide repeat protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 56.466 56.705 3 0.036363 63883 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 18.614 10.89 69958000 0 0 0 0 0 9759200 5463500 0 5075500 7378200 8500000 0 6986700 6842000 19953000 14282 692 13009 119692;119693;119694;119695;119696;119697;119698;119699 95528 95528 1 ERNTAAMVCSLENRDECLMCGS Unmodified 2602.0702 0.070246244 1171 P23921 RRM1 Ribonucleoside-diphosphate reductase large subunit yes yes 0 0 2 By MS/MS 2 0 1 1 78.483 73.747 3 0.0039118 91934 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 56.882 53.155 31241000 0 31241000 0 0 0 0 0 0 0 0 0 0 0 0 0 14283 1171 13010 119700 95529 95529 1 ERNTAAMVCSLENRDECLMCGS 2 Oxidation (M) 2634.0601 0.060075488 1171 P23921 RRM1 Ribonucleoside-diphosphate reductase large subunit yes yes 0 2 2 By MS/MS 2 0 1 1 53.95 50.053 3 1.4805E-30 62806 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 113.99 111.34 28969000 0 0 28969000 0 0 0 0 0 0 0 0 0 0 0 0 14284 1171 13010 119701 95530 95530 1691;1692 1 ERNTAAMVCSLENRDECLMCGS Oxidation (M) 2618.0652 0.065160866 1171 P23921 RRM1 Ribonucleoside-diphosphate reductase large subunit yes yes 0 1 2 By MS/MS 2 0 1 1 68.652 64.929 3 0.044995 80179 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 41.521 41.521 13732000 0 0 13732000 0 0 0 0 0 0 0 0 0 0 0 0 14285 1171 13010 119702 95531 95531 1691;1692 1 ERNTDQASMPDNTAAQK Oxidation (M) 1891.833 0.83301761 1356;1366 P35579;P35749 MYH9;MYH11 Myosin-9;Myosin-11 no no 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.6 3 1 27 1 2 1 2 3 2 1 2 2 3 2 3 2 2 3 7.3059 6.994 2;3 1.8605E-45 4727 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 157.37 134.26 2702800000 21248000 106090000 4850900 141810000 170860000 186670000 17970000 183440000 188790000 220770000 392220000 346410000 274760000 187730000 259220000 14286 1356;1366 13011 119703;119704;119705;119706;119707;119708;119709;119710;119711;119712;119713;119714;119715;119716;119717;119718;119719;119720;119721;119722;119723;119724;119725;119726;119727;119728;119729;119730;119731;119732;119733 95532;95533;95534;95535;95536;95537;95538;95539;95540;95541;95542;95543;95544;95545;95546;95547;95548 95535 2076 17 ERNTDQASMPDNTAAQK Unmodified 1875.8381 0.83810299 1356;1366 P35579;P35749 MYH9;MYH11 Myosin-9;Myosin-11 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18.24 17.64 3 1.3277E-19 22272 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.47 109.14 3190800000 32896000 166620000 6977100 241400000 245850000 278150000 183150000 232180000 187700000 237570000 234650000 390850000 277040000 234140000 241610000 14287 1356;1366 13011 119734;119735;119736;119737;119738;119739;119740;119741;119742;119743;119744;119745;119746;119747;119748 95549;95550;95551;95552;95553;95554;95555;95556;95557;95558;95559;95560;95561;95562;95563;95564;95565;95566;95567 95553 18 ERNVEDLSGGELQR Unmodified 1600.7805 0.78051176 1839 P61221 ABCE1 ATP-binding cassette sub-family E member 1 yes yes 0 0 1 By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 39.673 40.132 3 0.008532 44730 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 29.013 16.847 46934000 0 0 0 0 0 0 0 0 0 7029100 7175600 9515800 6439900 5356100 11418000 14288 1839 13012 119749;119750;119751;119752;119753;119754 95568 95568 1 ERPDVGVYIK Unmodified 1174.6346 0.63462279 5188 Q9Y496 KIF3A Kinesin-like protein KIF3A yes yes 0 0 1 By MS/MS 2 0 1 1 51.594 47.673 3 0.043008 60009 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 60.518 60.518 4426300 0 0 4426300 0 0 0 0 0 0 0 0 0 0 0 0 14289 5188 13013 119755 95569 95569 0 ERPEGETGDLGK Unmodified 1286.6103 0.61025853 2201 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.19 14.353 2 0.034608 13132 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.592 34.437 35903000 0 0 0 1840500 2673900 2312700 1963600 1510600 1351700 3962600 3245000 3723700 4994300 3466300 4857600 14290 2201 13014 119756;119757;119758;119759;119760;119761;119762;119763;119764;119765;119766;119767 95570 95570 1 ERPPFIPEGVVAR Unmodified 1465.8041 0.80414773 4263 Q9BZE4 GTPBP4 Nucleolar GTP-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.428 71.5 3 0.01189 81885 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 29.355 21.05 214740000 0 0 0 8303400 7315800 15701000 8731200 14931000 11814000 19097000 18257000 29567000 24998000 21773000 34251000 14291 4263 13015 119768;119769;119770;119771;119772;119773;119774;119775;119776;119777;119778;119779 95571;95572;95573;95574;95575 95575 5 ERPPLPNLK Unmodified 1062.6186 0.61857879 4630 Q9NSV4 DIAPH3 Protein diaphanous homolog 3 yes yes 0 0 1 By MS/MS 2 0 1 1 55.786 47.638 2 0.040878 65401 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 103.74 57.313 10399000 10399000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14292 4630 13016 119780 95576 95576 1 ERPQTNATVAR Unmodified 1241.6476 0.64764709 5176 Q9Y3T6 R3HCC1 R3H and coiled-coil domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 9.877 9.9814 3 0.0054426 8383 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 52.391 39.435 6770300 0 0 0 1000100 880630 0 0 0 0 0 0 1441300 1672600 0 1775700 14293 5176 13017 119781;119782;119783;119784;119785 95577 95577 1 ERPSQPEGLRK Unmodified 1295.6946 0.69459728 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 10.955 11.111 3 0.002817 9276 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 72.582 53.451 3376300000 0 0 0 177380000 164050000 0 203650000 263300000 228130000 286820000 322590000 520500000 401840000 369220000 438860000 14294 2102 13018 119786;119787;119788;119789;119790;119791;119792;119793;119794;119795;119796 95578;95579;95580;95581;95582;95583;95584;95585;95586;95587;95588;95589;95590 95585 6 ERPSSAIYPSDSFR Unmodified 1610.7689 0.76888444 3693 Q92974 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 2 1 2 2 1 2 1 2 1 48.884 48.983 2;3 0.001992 55230 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 39.143 34.429 373290000 0 0 0 44900000 35865000 30487000 52939000 3859300 0 0 0 121390000 0 73087000 10762000 14295 3693 13019 119797;119798;119799;119800;119801;119802;119803;119804;119805;119806;119807;119808;119809;119810 95591;95592;95593;95594;95595;95596;95597;95598;95599 95593 8 ERPSSREDTPSR Unmodified 1415.6753 0.6753184 4867 Q9UDY2 TJP2 Tight junction protein ZO-2 yes yes 0 0 2 By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 6.2702 6.357 3 0.0038506 3968 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 79.466 49.531 17889000 0 0 0 0 929040 676180 872700 0 1344700 0 4055500 5829000 4181900 0 0 14296 4867 13020 119811;119812;119813;119814;119815;119816;119817 95600;95601;95602 95602 3 ERPTPSLNNNCTTSEDSLVLYNR Unmodified 2679.2559 0.25585671 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 2 1 1 1 1 1 1 1 1 1 66.916 66.99 3 6.8807E-172 76789 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 200.29 192.75 669480000 0 0 0 12798000 22223000 69117000 32155000 45352000 32971000 62970000 69591000 84308000 39026000 61579000 137380000 14297 848 13021 119818;119819;119820;119821;119822;119823;119824;119825;119826;119827;119828;119829;119830 95603;95604;95605;95606;95607;95608;95609;95610;95611;95612;95613;95614;95615;95616;95617;95618 95604 15 ERPVLPSSESFTTR Unmodified 1604.8158 0.81583463 2551 Q15596 NCOA2 Nuclear receptor coactivator 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 54.72 54.932 3 0.00038841 62213 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 47.345 39.168 84921000 0 0 0 0 5647900 9330700 18134000 6677600 0 0 10727000 10315000 7549900 8387500 8151900 14298 2551 13022 119831;119832;119833;119834;119835;119836;119837;119838;119839 95619;95620;95621 95620 3 ERQAALQVAEGFISR Unmodified 1673.8849 0.88491725 1407 P40121 CAPG Macrophage-capping protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 77.37 77.49 3 1.423E-07 88917 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.866 76.747 52430000 0 0 0 0 0 9841200 0 0 0 8046900 0 0 0 0 34542000 14299 1407 13023 119840;119841;119842 95622;95623;95624 95624 3 ERQDADGQMK Unmodified 1176.5193 0.51933503 455 O75116 ROCK2 Rho-associated protein kinase 2 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 5.7558 2.455 2 0.014585 4485 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.11 72.505 26945000 0 26945000 0 0 0 0 0 0 0 0 0 0 0 0 0 14300 455 13024 119843;119844 95625 95625 1 ERQITEEDLEGK Unmodified 1445.6998 0.69980182 3562 Q8WVK2 SNRNP27 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 33.307 32.533 3 0.0037061 44113 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.118 56.793 65964000 6848600 0 0 0 7510800 0 0 4571100 16918000 10966000 0 0 11197000 0 7953600 14301 3562 13025 119845;119846;119847;119848;119849;119850;119851 95626;95627;95628;95629;95630;95631 95629 4 ERQQQVEAVELEAK Unmodified 1655.8479 0.84786304 3151 Q86UP2 KTN1 Kinectin yes yes 0 0 1 By MS/MS 2 0 1 1 44.248 40.477 3 0.0046902 51076 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 43.791 33.452 5397500 0 0 5397500 0 0 0 0 0 0 0 0 0 0 0 0 14302 3151 13026 119852 95632 95632 1 ERQTNPSAMEVEEDDPVPEIR Oxidation (M) 2456.1125 0.11254652 1755 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 1 1 By MS/MS 10 0 1 1 61.677 62.257 3 1.2183E-05 70400 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.469 47.441 9278300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9278300 14303 1755 13027 119853 95633 95633 2868 1 ERQTNPSAMEVEEDDPVPEIR Unmodified 2440.1176 0.11763189 1755 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 0 1 By MS/MS 10 0 1 1 68.766 69.26 3 4.0527E-08 78817 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.453 61.744 10018000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10018000 14304 1755 13027 119854 95634 95634 1 ERQTNPSAMEVEEDDPVPEIRR Unmodified 2596.2187 0.21874292 1755 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 0 2 By MS/MS 10 0 1 1 61.201 61.781 4 3.9249E-05 69844 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.076 36.399 17015000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17015000 14305 1755 13028 119855 95635 95635 1 ERREEEDIEEK Unmodified 1460.6743 0.67431535 4630 Q9NSV4 DIAPH3 Protein diaphanous homolog 3 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 9.5199 9.1391 3 0.0019364 6348 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 101.93 44.58 275650000 24875000 0 30941000 16443000 12448000 19538000 13010000 13974000 9919200 14496000 0 40861000 28480000 21100000 29567000 14306 4630 13029 119856;119857;119858;119859;119860;119861;119862;119863;119864;119865;119866;119867;119868 95636;95637;95638;95639;95640;95641;95642;95643;95644 95641 1 ERSDALNSAIDK Unmodified 1317.6525 0.6524577 1340 P35221 CTNNA1 Catenin alpha-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.69 2.88 3 2 24 1 2 2 2 2 2 2 2 2 2 2 2 2 2 2 28.051 27.51 2;3 5.2517E-08 28548 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 127.17 85.726 729440000 406060 56877000 22366000 38549000 34481000 68946000 48061000 41945000 45907000 57488000 64435000 53537000 57695000 50258000 88483000 14307 1340 13030 119869;119870;119871;119872;119873;119874;119875;119876;119877;119878;119879;119880;119881;119882;119883;119884;119885;119886;119887;119888;119889;119890;119891;119892;119893;119894;119895;119896;119897 95645;95646;95647;95648;95649;95650;95651;95652;95653;95654;95655;95656;95657;95658;95659;95660;95661;95662;95663 95657 12 ERSDTFINLR Unmodified 1249.6415 0.64149908 1057 P17655 CAPN2 Calpain-2 catalytic subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.07 52.216 3 0.0010118 58178 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 78.655 56.569 147340000 0 0 0 7712400 3902500 15033000 9605800 9504600 7772500 10253000 18521000 19179000 11077000 9088100 25695000 14308 1057 13031 119898;119899;119900;119901;119902;119903;119904;119905;119906;119907;119908;119909 95664;95665;95666;95667;95668;95669;95670;95671;95672;95673;95674;95675 95673 12 ERSGVSLAALK Unmodified 1129.6455 0.64552182 1038;920 P10412;P16402;P16403 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 44.235 43.789 2 0.0036006 63544 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 105.17 56.882 324410000 65940000 0 0 0 0 12990000 13140000 13863000 8679000 16869000 20268000 50141000 24975000 15201000 82347000 14309 920;1038 13032 119910;119911;119912;119913;119914;119915;119916;119917;119918;119919;119920 95676;95677;95678 95677 2 ERSMATVDEEEQAVLDRLTFDYHQK Oxidation (M) 3025.4087 0.40872854 3225 Q8IVD9 NUDCD3 NudC domain-containing protein 3 yes yes 0 1 2 By MS/MS 2 0 1 1 89.533 81.403 4 7.1577E-05 105764 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.927 46.423 8226600 8226600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14310 3225 13033 119921 95679 95679 4841 1 ERSMATVDEEEQAVLDRLTFDYHQK Unmodified 3009.4138 0.41381391 3225 Q8IVD9 NUDCD3 NudC domain-containing protein 3 yes yes 0 0 2 By MS/MS 2 0 1 1 92.299 84.169 4 6.8263E-08 109152 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.413 61.446 8281900 8281900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14311 3225 13033 119922 95680 95680 1 ERSSLLAVSNK Unmodified 1202.6619 0.66190017 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 2 18 2 1 2 2 2 1 2 1 1 1 1 2 2 32.416 31.903 2;3 0.0090032 46660 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.448 30.204 284850000 63414000 0 0 3195900 19835000 18543000 23655000 5203900 21721000 20687000 18684000 6946000 16610000 21383000 44971000 14312 1364 13034 119923;119924;119925;119926;119927;119928;119929;119930;119931;119932;119933;119934;119935;119936;119937;119938;119939;119940;119941;119942 95681;95682;95683;95684;95685;95686;95687 95683 4 ERSTSLSALVR Unmodified 1217.6728 0.67279921 2830 Q5VZ89 DENND4C DENN domain-containing protein 4C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 2 1 1 1 1 46.459 46.648 3 0.0019871 52592 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 54.471 34.709 86969000 0 0 0 3178200 2798200 6380300 7163600 11098000 3678000 7868800 9923100 6695600 11094000 5892100 11199000 14313 2830 13035 119943;119944;119945;119946;119947;119948;119949;119950;119951;119952;119953;119954;119955 95688;95689;95690;95691;95692;95693;95694;95695;95696;95697 95689 10 ERTALFEEISR Unmodified 1349.6939 0.69392858 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 59.423 59.605 3 0.00070991 67788 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 62.338 45.396 98426000 0 0 0 0 3374300 8871700 5607300 7634000 5656800 9759900 7234200 16100000 8552000 7110200 18526000 14314 2431 13036 119956;119957;119958;119959;119960;119961;119962;119963;119964;119965;119966 95698;95699;95700;95701;95702;95703;95704;95705;95706;95707;95708;95709 95698 12 ERTALFEEISRSGELAQEYDK Unmodified 2470.1976 0.19759677 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 2 By MS/MS 2 0 1 1 85.621 77.491 4 8.2002E-07 101025 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.765 63.042 51892000 51892000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14315 2431 13037 119967 95710 95710 1 ERTAQCFLR Unmodified 1179.5819 0.58187571 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 1 By matching By matching By MS/MS By matching By MS/MS By matching 10 0 6 1 1 1 1 1 1 32.061 32.183 3 0.029884 35149 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 36.424 22.218 15617000 0 0 0 1907100 1571700 0 0 2069400 0 0 0 3080200 3048300 3940200 0 14316 2930 13038 119968;119969;119970;119971;119972;119973 95711;95712 95712 2 ERTATGLTHIIETRK Unmodified 1724.9533 0.95333116 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 2 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 41.901 42.251 4 0.0080329 46284 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 33.313 28.422 61745000 0 0 0 0 0 6454100 0 3281100 7252700 0 0 13913000 10530000 5442100 14871000 14317 3023 13039 119974;119975;119976;119977;119978;119979;119980 95713 95713 1 ERTEEPMETEPK Oxidation (M) 1490.6559 0.65588809 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.18 3.74 3 1 7 1 2 1 1 1 1 1 1 1 1 12.29 11.215 3 0.0015003 8435 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 57.792 52.072 190650000 10663000 45694000 2669700 0 0 24265000 0 12671000 15117000 22968000 16096000 0 21333000 19174000 0 14318 2451 13040 119981;119982;119983;119984;119985;119986;119987;119988;119989;119990;119991 95714;95715;95716;95717;95718;95719;95720;95721;95722;95723;95724 95720 4019 11 ERTEEPMETEPK Unmodified 1474.661 0.66097347 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.89 2.67 2 2 23 4 2 1 2 2 2 2 2 2 2 2 2 2 19.425 19.033 2;3 4.7939E-05 19705 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 89.43 76.23 482050000 0 67119000 0 33442000 4490800 37998000 27530000 28332000 23624000 39372000 37367000 47062000 43560000 27044000 65106000 14319 2451 13040 119992;119993;119994;119995;119996;119997;119998;119999;120000;120001;120002;120003;120004;120005;120006;120007;120008;120009;120010;120011;120012;120013;120014;120015;120016;120017;120018 95725;95726;95727;95728;95729;95730;95731;95732;95733;95734;95735;95736 95725 11 ERTESPSASALVQPPANTEEGK Unmodified 2297.1135 0.11353279 2708 Q53SF7 COBLL1 Cordon-bleu protein-like 1 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 48.451 48.698 3 6.1488E-16 54701 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 61.537 47.077 65002000 0 0 0 5379000 0 6970900 7670900 0 0 0 12239000 12781000 8042500 0 11919000 14320 2708 13041 120019;120020;120021;120022;120023;120024;120025;120026;120027 95737;95738;95739;95740;95741;95742;95743;95744;95745 95743 9 ERTEVEQAYAK Unmodified 1322.6466 0.64664404 2555 Q15642 TRIP10 Cdc42-interacting protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 18.815 17.925 3 5.9457E-07 22041 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 103.08 86.946 192550000 7775300 115900000 7923100 3470800 3098600 6631900 3270300 3595200 2756000 6716400 5154100 7240200 0 6733300 12292000 14321 2555 13042 120028;120029;120030;120031;120032;120033;120034;120035;120036;120037;120038;120039;120040;120041;120042 95746;95747;95748;95749;95750;95751;95752;95753;95754 95749 6 ERTNEGVIEFR Unmodified 1348.6735 0.67352749 2260 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 43.582 43.76 3 0.00044566 47475 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.611 65.561 135010000 0 0 0 11257000 7721200 10919000 8886800 0 0 10576000 14478000 22471000 13684000 12067000 22946000 14322 2260 13043 120043;120044;120045;120046;120047;120048;120049;120050;120051;120052 95755;95756;95757;95758;95759;95760;95761;95762;95763 95758 4 ERTPEEPVAK Unmodified 1154.5932 0.5931519 3908 Q96KM6 ZNF512B Zinc finger protein 512B yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 14.025 13.925 3 0.025119 13312 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 31.758 15.087 11474000 0 0 0 0 5871500 0 5602400 0 0 0 0 0 0 0 0 14323 3908 13044 120053;120054 95764;95765 95764 2 ERTPVDVILASVG Unmodified 1354.7456 0.7456298 4839 Q9UBF2 COPG2 Coatomer subunit gamma-2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 91.9 91.405 2 0.034326 110579 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 62.303 43.032 92751000 0 63061000 9388300 0 0 2036600 958110 1224100 1126200 3049400 2016300 2229300 1397600 1882400 4381800 14324 4839 13045 120055;120056;120057;120058;120059;120060;120061;120062;120063;120064;120065;120066 95766;95767 95767 0 ERTSTSSSSVQAR Unmodified 1394.675 0.67498405 4976 Q9UKV3 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 6.1783 6.1163 3 6.6307E-05 3139 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 67.997 56.738 46063000 0 0 5946600 3528100 2446000 2519100 4090200 2930400 2172900 2550000 5190700 4745100 3500100 3396000 3047400 14325 4976 13046 120067;120068;120069;120070;120071;120072;120073;120074;120075;120076;120077;120078;120079 95768;95769;95770;95771;95772;95773;95774;95775;95776 95774 7 ERVDELTTDLEILK Unmodified 1672.8883 0.88833087 2391 Q14203 DCTN1 Dynactin subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 86.522 81.865 3 0.0010098 103707 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.044 61.464 115430000 62275000 49612000 3546500 0 0 0 0 0 0 0 0 0 0 0 0 14326 2391 13047 120080;120081;120082;120083 95777;95778;95779 95779 2 ERVEAGDVIYIEANSGAVK Unmodified 2019.0273 0.027283968 5086 Q9Y265 RUVBL1 RuvB-like 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.5 0.5 2 2 2 1 1 75.363 70.681 3 1.1877E-05 90951 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.768 37.083 88520000 82856000 1668200 3996000 0 0 0 0 0 0 0 0 0 0 0 0 14327 5086 13048 120084;120085;120086;120087 95780;95781;95782;95783;95784;95785 95783 6 ERVEAVNMAEGIIHDTETK Unmodified 2141.0423 0.042282105 1399 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS 2.67 0.471 1 2 1 2 81.983 78.068 3;4 0.0018959 93196 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 38.915 36.317 84361000 1054700 83307000 0 0 0 0 0 0 0 0 0 0 0 0 0 14328 1399 13049 120088;120089;120090 95786;95787 95787 1 ERVEAVNMAEGIIHDTETK Oxidation (M) 2157.0372 0.037196727 1399 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 66.29 62.537 3;4 4.3737E-06 83232 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.792 52.289 8381500 0 0 8381500 0 0 0 0 0 0 0 0 0 0 0 0 14329 1399 13049 120091;120092 95788;95789 95788 2170 1 ERVEELEHR Unmodified 1195.5945 0.59454889 2156 Q08379 GOLGA2 Golgin subfamily A member 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.052 15.223 3 0.0020801 14957 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 80.24 43.569 102330000 0 0 0 5528200 3675300 6127500 4409000 5708500 5020800 5307600 15308000 11503000 12836000 10562000 16348000 14330 2156 13050 120093;120094;120095;120096;120097;120098;120099;120100;120101;120102;120103;120104 95790;95791;95792;95793;95794;95795;95796 95795 7 ERVEPHQLAIDRPSQK Unmodified 1902.0072 0.0071576485 2755 Q5SQI0 ATAT1 Alpha-tubulin N-acetyltransferase 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 32.141 32.235 4 0.01079 35270 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 25.957 15.298 20084000 0 0 0 0 0 6115600 0 0 5930700 8038200 0 0 0 0 0 14331 2755 13051 120105;120106;120107 95797;95798 95797 2 ERVGYREGPTVETK Unmodified 1619.8267 0.82673367 3740 Q96AT1 KIAA1143 Uncharacterized protein KIAA1143 yes yes 0 0 2 By MS/MS 2 0 2 2 30.013 24.393 3;4 4.4698E-14 34304 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 118.24 70.708 206660000 206660000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14332 3740 13052 120108;120109 95799;95800 95800 2 ERVMEIVDADEK Unmodified 1432.6868 0.68679429 5231 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 6.57 3.96 3 4 1 2 1 1 1 1 50.708 48.649 2;3 1.0692E-08 67449 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 121.69 58.476 106810000 35525000 0 45217000 0 0 6001300 3436200 0 0 0 0 8855400 0 0 7777100 14333 5231 13053 120110;120111;120112;120113;120114;120115;120116 95801;95802;95803;95804;95805;95806;95807 95802 7 ERVMEIVDADEK Oxidation (M) 1448.6817 0.68170891 5231 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 1 1 By MS/MS By MS/MS 2 0 7 3 4 38.774 33.966 2;3 5.9576E-05 46856 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 113.63 49.589 84843000 36094000 0 48748000 0 0 0 0 0 0 0 0 0 0 0 0 14334 5231 13053 120117;120118;120119;120120;120121;120122;120123 95808;95809;95810;95811;95812;95813 95808 6633 3 ERVPSVAEAPQLRPAGTAAAK Unmodified 2118.1546 0.15455017 2839 Q63ZY3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 yes yes 0 0 2 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 52.728 52.793 4 0.0080694 59667 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 33.79 27.976 153290000 0 0 0 6865400 9861800 10162000 11916000 10380000 10718000 0 39511000 0 0 19708000 34166000 14335 2839 13054 120124;120125;120126;120127;120128;120129;120130;120131;120132 95814;95815;95816;95817 95815 3 ERVTPPEGYEVVTVFPK Unmodified 1946.0149 0.014928368 119 O00151 PDLIM1 PDZ and LIM domain protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 78.859 78.676 3 0.00011442 90549 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.979 52.278 75055000 0 0 9528400 0 0 9982400 0 2811000 0 7350100 7280700 9079300 0 6825200 22198000 14336 119 13055 120133;120134;120135;120136;120137;120138;120139;120140 95818;95819;95820;95821;95822;95823;95824;95825;95826 95820 9 ERYGISSMIQSQEK Oxidation (M) 1670.7934 0.79338463 1009 P14868 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 0 1 1 By MS/MS 2 0 1 1 43.53 36.737 3 0.014134 50774 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 41.967 23.138 19486000 19486000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14337 1009 13056 120141 95827 95827 1387 1 ERYGISSMIQSQEK Unmodified 1654.7985 0.79847001 1009 P14868 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS 2 0 1 1 65.626 57.337 3 9.8026E-19 76999 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 124.09 104.49 22766000 22766000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14338 1009 13056 120142 95828 95828 1 ERYMEEMADTADAIEMATLDK Oxidation (M) 2448.0495 0.049477252 2391 Q14203 DCTN1 Dynactin subunit 1 yes yes 0 1 1 By MS/MS 2 0 1 1 94.557 86.427 3 1.5465E-59 111816 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 139.02 131.66 36558000 36558000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14339 2391 13057 120143 95829;95830;95831 95830 3890 3 ERYMEEMADTADAIEMATLDK Unmodified 2432.0546 0.05456263 2391 Q14203 DCTN1 Dynactin subunit 1 yes yes 0 0 1 By MS/MS 2 0 1 1 95.526 87.396 3 1.0837E-13 112951 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.122 91.932 30822000 30822000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14340 2391 13057 120144 95832 95832 0 ERYNFPNPNPFVEDDMDK Oxidation (M) 2241.9637 0.96369743 278 O15371 EIF3D Eukaryotic translation initiation factor 3 subunit D yes yes 0 1 1 By MS/MS 2 0 1 1 80.865 72.735 3 0.0013193 95321 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.566 47.04 38153000 38153000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14341 278 13058 120145 95833 95833 367 1 ERYNFPNPNPFVEDDMDK Unmodified 2225.9688 0.96878281 278 O15371 EIF3D Eukaryotic translation initiation factor 3 subunit D yes yes 0 0 1 By MS/MS 2 0 1 1 83.972 75.842 3 5.4699E-05 99239 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.996 68.949 24681000 24681000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14342 278 13058 120146 95834;95835 95835 2 ERYPTFIDALR Unmodified 1379.7197 0.7197494 167 O00541 PES1 Pescadillo homolog yes yes 0 0 1 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 77.343 77.397 3 0.0033652 88837 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.044 39.531 24780000 0 0 0 1646700 0 5890500 1747100 2713400 2968200 0 0 0 0 0 9814500 14343 167 13059 120147;120148;120149;120150;120151;120152 95836;95837;95838 95837 3 ERYQEVLDK Unmodified 1178.5932 0.5931519 3414 Q8ND24 RNF214 RING finger protein 214 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 29.176 29.303 3 0.0021997 31534 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 79.986 48.115 103310000 0 0 0 12189000 8903600 9601900 15962000 9928300 9605500 0 0 19251000 0 0 17869000 14344 3414 13060 120153;120154;120155;120156;120157;120158;120159;120160 95839;95840;95841;95842;95843;95844 95842 5 ERYSDFVVHEIGK Unmodified 1577.7838 0.78380622 3950 Q96PZ0 PUS7 Pseudouridylate synthase 7 homolog yes yes 0 0 1 By MS/MS 10 0 1 1 61.088 61.668 3 0.031549 69584 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.842 15.013 8597100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8597100 14345 3950 13061 120161 95845 95845 1 ERYSYVCPDLVK Unmodified 1527.7392 0.73916421 1835 P61158 ACTR3 Actin-related protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.8 4 1 8 1 2 2 1 1 1 1 1 1 1 1 60.427 58.502 2;3 0.0023133 72934 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 75.739 66.689 455420000 187830000 72122000 112140000 6415200 0 6808100 0 0 3984300 0 10798000 16382000 9208900 9339300 20387000 14346 1835 13062 120162;120163;120164;120165;120166;120167;120168;120169;120170;120171;120172;120173;120174 95846;95847;95848;95849;95850;95851;95852 95850 5 ESAAHDYTLR Unmodified 1161.5415 0.54145068 2122 Q06124 PTPN11 Tyrosine-protein phosphatase non-receptor type 11 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS 10 0 12 1 1 1 2 1 2 1 1 1 1 21.905 22.107 3 0.028308 23119 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 46.706 33.306 91960000 0 0 0 5715600 0 10273000 8941400 7808700 6506200 11951000 11114000 0 8058400 9840200 11752000 14347 2122 13063 120175;120176;120177;120178;120179;120180;120181;120182;120183;120184;120185;120186 95853;95854;95855 95855 1 ESAAHDYTLRELK Unmodified 1531.7631 0.76307078 2122 Q06124 PTPN11 Tyrosine-protein phosphatase non-receptor type 11 yes yes 0 0 1 By MS/MS 2 0 1 1 42.606 38.885 3 0.024241 49238 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 52.863 31.232 9026600 0 0 9026600 0 0 0 0 0 0 0 0 0 0 0 0 14348 2122 13064 120187 95856 95856 1 ESAAPAAAPTAEAPPPSVVTRPEPQALPSPAIR Unmodified 3245.7044 0.70444027 3670 Q92841 DDX17 Probable ATP-dependent RNA helicase DDX17 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 1 2 1 2 2 2 2 77.259 77.305 3;4 3.1809E-84 89376 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 109.44 105.21 530240000 0 0 0 18681000 32007000 34365000 44565000 36908000 18071000 53118000 46012000 63046000 53912000 61838000 67719000 14349 3670 13065 120188;120189;120190;120191;120192;120193;120194;120195;120196;120197;120198;120199;120200;120201;120202;120203;120204;120205;120206;120207;120208;120209 95857;95858;95859;95860;95861;95862;95863;95864;95865;95866;95867;95868;95869;95870;95871;95872;95873;95874;95875;95876;95877 95865 17 ESAAPASPAPSPAPSPTPAPPQK Unmodified 2152.08 0.08004782 2667 Q3KQU3 MAP7D1 MAP7 domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 47.984 48.082 3 0.0041723 54980 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 26.627 17.212 48516000 0 0 0 4642300 4286200 5472400 5775100 0 4717700 0 4951800 9774300 4701800 4194300 0 14350 2667 13066 120210;120211;120212;120213;120214;120215;120216;120217;120218 95878;95879;95880;95881;95882;95883;95884;95885;95886 95885 9 ESAAYLALLTR Unmodified 1206.6608 0.66083754 3940 Q96NY9 MUS81 Crossover junction endonuclease MUS81 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 82.239 82.368 2 0.009613 95739 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 50.353 39.189 12685000 0 0 0 0 0 1524600 1187000 1345000 0 1580100 2676500 2259300 2112600 0 0 14351 3940 13067 120219;120220;120221;120222;120223;120224;120225 95887;95888;95889 95888 3 ESADGLQGETQLLVSR Unmodified 1701.8533 0.85334235 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 72.637 72.813 2 0.0035776 83926 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 58.674 41.732 16811000 0 0 0 0 0 0 0 2178400 0 5662100 8970500 0 0 0 0 14352 1492 13068 120226;120227;120228 95890 95890 1 ESADGLQGETQLLVSRK Unmodified 1829.9483 0.94830537 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.628 64.717 3 0.00017043 74155 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 57.52 46.732 101410000 0 0 0 4900200 5496100 7872400 7443700 6414600 6737500 6744800 11302000 11791000 7719800 8846500 16146000 14353 1492 13069 120229;120230;120231;120232;120233;120234;120235;120236;120237;120238;120239;120240 95891;95892;95893;95894;95895;95896;95897;95898;95899;95900;95901 95895 11 ESAEALATK Unmodified 918.46583 0.46582612 6 A0MZ66 KIAA1598 Shootin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 17.567 17.85 2 0.02342 17682 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 51.066 33.773 64063000 0 0 0 0 13436000 0 0 0 0 0 25279000 25348000 0 0 0 14354 6 13070 120241;120242;120243 95902;95903;95904 95902 3 ESAEEAWGTEEAPAPAPAR Unmodified 1967.8861 0.88609904 2964 Q6QNY0 BLOC1S3 Biogenesis of lysosome-related organelles complex 1 subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 57.314 57.504 2 1.5455E-46 65213 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 122.46 93.695 20828000 0 0 0 0 0 0 0 0 0 7028400 0 0 9083800 4716000 0 14355 2964 13071 120244;120245;120246;120247;120248;120249;120250 95905;95906;95907;95908;95909;95910;95911 95907 7 ESAEFQTQLEK Unmodified 1308.6198 0.61976058 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 43.961 42.846 2 1.1297E-73 47362 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 198.61 179.26 1164300000 17568000 528850000 0 37007000 26768000 47344000 35413000 37188000 28931000 55911000 66634000 72911000 68413000 52619000 88760000 14356 965 13072 120251;120252;120253;120254;120255;120256;120257;120258;120259;120260;120261;120262;120263;120264;120265 95912;95913;95914;95915;95916;95917;95918;95919;95920;95921;95922;95923;95924;95925 95921 13 ESAEGPPPLYNTNHDFK Unmodified 1914.8748 0.87480607 4793 Q9P0K8 FOXJ2 Forkhead box protein J2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 54.617 54.749 3 0.00016159 62023 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 64.52 57.462 212750000 0 0 0 18650000 14391000 12322000 14880000 18527000 13026000 27615000 18066000 23955000 15283000 18215000 17825000 14357 4793 13073 120266;120267;120268;120269;120270;120271;120272;120273;120274;120275;120276;120277 95926;95927;95928;95929;95930;95931;95932;95933;95934;95935 95932 10 ESAFEFLSSA Unmodified 1086.487 0.4869555 1422 P40925 MDH1 Malate dehydrogenase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.68 3.91 1 5 2 11 2 5 1 1 1 1 1 1 1 1 1 1 1 1 90.551 89.22 1;2 7.6953E-05 107897 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 139.31 133.27 5843800000 882260000 4814000000 38397000 0 1158200 1133100 1515300 1195200 917840 2360500 13594000 15799000 875630 10838000 59687000 14358 1422 13074 120278;120279;120280;120281;120282;120283;120284;120285;120286;120287;120288;120289;120290;120291;120292;120293;120294;120295;120296 95936;95937;95938;95939;95940;95941;95942;95943;95944;95945;95946;95947 95938 10 ESAFQSEPR Unmodified 1049.4778 0.47778779 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 22.315 21.21 2 0.0048548 26811 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.26 92.696 43220000 0 14648000 0 0 0 0 0 11447000 0 0 0 17124000 0 0 0 14359 2775 13075 120297;120298;120299;120300;120301;120302;120303;120304 95948;95949;95950;95951;95952;95953;95954;95955 95949 8 ESAIVSRPLNPFTAK Unmodified 1628.8886 0.88860564 5133 Q9Y314 NOSIP Nitric oxide synthase-interacting protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.67 1.6 1 23 1 1 2 2 2 2 2 2 2 2 2 2 2 68.827 68.594 2;3 0.0017693 78678 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 46.926 29.707 441200000 33001000 0 0 20281000 17708000 37517000 31253000 29981000 28436000 41519000 37820000 42080000 30329000 33867000 57411000 14360 5133 13076 120305;120306;120307;120308;120309;120310;120311;120312;120313;120314;120315;120316;120317;120318;120319;120320;120321;120322;120323;120324;120325;120326;120327;120328 95956;95957;95958;95959;95960;95961;95962;95963;95964 95956 6 ESALTLACYK Unmodified 1154.5642 0.56415996 472;3250 Q8IWZ3;O75179 ANKHD1;ANKRD17 Ankyrin repeat and KH domain-containing protein 1;Ankyrin repeat domain-containing protein 17 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 57.336 57.457 2 0.033516 66035 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 42.075 31.209 242820000 0 0 0 11828000 11674000 17000000 17404000 21274000 15875000 18938000 25087000 25674000 27794000 20197000 30075000 14361 3250;472 13077 120329;120330;120331;120332;120333;120334;120335;120336;120337;120338;120339;120340 95965;95966 95966 1 ESAQCVGDEFLNCK Unmodified 1655.692 0.69195602 5253 Q9Y5X2 SNX8 Sorting nexin-8 yes yes 0 0 0 By MS/MS 2 0 1 1 66.78 60.862 2 0.0029086 77762 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.752 76.486 44208000 0 44208000 0 0 0 0 0 0 0 0 0 0 0 0 0 14362 5253 13078 120341 95967 95967 1 ESAVASTEVK Unmodified 1019.5135 0.5135046 1784 P56524 HDAC4 Histone deacetylase 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 16.284 16.381 2 0.011466 14795 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 54.191 24.774 41778000 0 0 0 4030300 3683700 3806200 3498500 2747100 3585100 5350700 6502400 0 0 8574300 0 14363 1784 13079 120342;120343;120344;120345;120346;120347;120348;120349;120350 95968;95969;95970;95971 95971 4 ESAVGQMGWSGGLSLR Oxidation (M) 1649.7832 0.78315429 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 72.19 72.466 2 0.00069824 83267 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 54.7 45.012 13894000 0 0 0 0 0 0 5097700 0 0 0 0 0 0 0 8796500 14364 4285 13080 120351;120352 95972;95973 95972 5745 2 ESAVHSQYK Unmodified 1047.4985 0.49852324 4026 Q99575 POP1 Ribonucleases P/MRP protein subunit POP1 yes yes 0 0 0 By MS/MS 2 0 1 1 7.5351 4.2921 2 6.4419E-06 6589 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 156.75 103.97 49109000 0 49109000 0 0 0 0 0 0 0 0 0 0 0 0 0 14365 4026 13081 120353 95974 95974 1 ESAWTKPDGVK Unmodified 1216.6088 0.60880197 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 1 2 2 2 2 2 2 2 2 2 1 28.446 28.645 2;3 0.001564 30821 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 55.314 45.31 606650000 0 0 0 29611000 30507000 33046000 40589000 44749000 31216000 59520000 83965000 89706000 63926000 57067000 42745000 14366 213 13082 120354;120355;120356;120357;120358;120359;120360;120361;120362;120363;120364;120365;120366;120367;120368;120369;120370;120371;120372;120373;120374;120375 95975;95976;95977;95978;95979;95980;95981;95982;95983;95984;95985;95986;95987;95988;95989;95990 95977 8 ESCDSALR Unmodified 936.39709 0.39709463 1705 P52907 CAPZA1 F-actin-capping protein subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 10.206 10.322 2 0.021412 8756 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 61.999 44.634 40873000 0 0 0 5434500 2080800 4313000 3394800 1826400 2812700 2122600 0 6401400 3843000 3433900 5209900 14367 1705 13083 120376;120377;120378;120379;120380;120381;120382;120383;120384;120385;120386 95991;95992;95993;95994;95995 95994 4 ESCITQLK Unmodified 977.48518 0.48518136 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 31.417 30.614 2 0.017656 33146 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 65.313 42.821 69284000 0 46485000 0 3150200 2542000 0 4073300 0 0 0 0 0 6895500 6137400 0 14368 2291 13084 120387;120388;120389;120390;120391;120392 95996;95997 95997 1 ESCLEAYTGIVQGLK Unmodified 1666.8236 0.82362212 2457 Q14974 KPNB1 Importin subunit beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 2 2 2 1 2 2 1 1 2 2 83.953 84.073 2;3 6.7032E-20 97019 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 138.25 122 250980000 0 0 0 0 10502000 35463000 10069000 15881000 3624700 41265000 32117000 18122000 7251200 18760000 57922000 14369 2457 13085 120393;120394;120395;120396;120397;120398;120399;120400;120401;120402;120403;120404;120405;120406;120407;120408;120409;120410 95998;95999;96000;96001;96002;96003;96004;96005;96006;96007;96008;96009 96003 11 ESCTAHAASQAATQR Unmodified 1587.706 0.7059666 4755 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 8.9525 9.3582 3 0.044008 7468 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 25.866 18.085 2724900 0 0 0 0 0 0 0 0 0 0 2724900 0 0 0 0 14370 4755 13086 120411 96010 96010 1 ESDAMFAAER Unmodified 1125.4761 0.47607323 230 O14964 HGS Hepatocyte growth factor-regulated tyrosine kinase substrate yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 39.322 39.541 2 0.011956 42953 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.327 36.087 36490000 0 0 0 5047400 2996200 0 0 0 0 4518100 5337400 6559800 2499300 2775900 6756000 14371 230 13087 120412;120413;120414;120415;120416;120417;120418;120419;120420 96011;96012;96013;96014;96015 96013 5 ESDDPMAYIHFTAEGEVTFK Oxidation (M) 2302.01 0.0099789239 1002 P14625 HSP90B1 Endoplasmin yes yes 0 1 0 By MS/MS 2.25 0.433 3 1 4 88.75 81.755 3 6.1287E-05 84601 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 55.383 51.994 35597000 35597000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14372 1002 13088 120421;120422;120423;120424 96016;96017;96018;96019;96020;96021;96022 96016 1359 6 ESDDPMAYIHFTAEGEVTFK Unmodified 2286.0151 0.015064302 1002 P14625 HSP90B1 Endoplasmin yes yes 0 0 0 By MS/MS By MS/MS 2.56 0.497 8 10 16 2 97.064 91.669 3;4 9.0605E-09 111459 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.393 78.301 127210000 124220000 2991500 0 0 0 0 0 0 0 0 0 0 0 0 0 14373 1002 13088 120425;120426;120427;120428;120429;120430;120431;120432;120433;120434;120435;120436;120437;120438;120439;120440;120441;120442 96023;96024;96025;96026;96027;96028;96029;96030;96031;96032;96033;96034;96035;96036;96037;96038;96039;96040;96041;96042;96043;96044;96045;96046 96036 22 ESDDVLER Unmodified 961.43525 0.43525428 2545 Q15542 TAF5 Transcription initiation factor TFIID subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 23.931 24.039 2 0.037548 25055 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 51.346 24.092 36816000 0 0 0 5732200 1811900 4330900 2253200 3397100 1402700 3770900 0 10503000 3613500 0 0 14374 2545 13089 120443;120444;120445;120446;120447;120448;120449;120450;120451 96047;96048 96048 2 ESDDVLERIMDEK Unmodified 1577.7243 0.72430201 2545 Q15542 TAF5 Transcription initiation factor TFIID subunit 5 yes yes 0 0 1 By MS/MS 2 0 1 1 84.796 76.666 3 0.012153 100146 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.115 30.858 9475900 9475900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14375 2545 13090 120452 96049 96049 1 ESDLGDVSEEHGEWNK Unmodified 1829.7704 0.77040058 3233 Q8IW35 CEP97 Centrosomal protein of 97 kDa yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9 2.45 1 6 1 1 1 1 1 1 1 45.928 45.6 3 0.0047712 50254 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.808 32.371 48189000 0 4320200 0 0 0 0 0 0 4538300 8263600 8751200 6458400 7640500 0 8216900 14376 3233 13091 120453;120454;120455;120456;120457;120458;120459 96050;96051;96052 96051 3 ESDLNGAQIK Unmodified 1073.5353 0.53530267 1111 P20700 LMNB1 Lamin-B1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 25.115 25.336 2 0.001801 26614 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 95.815 70.078 90051000 0 0 0 7928800 3658400 0 5191500 5675500 3844200 8884000 8611500 11406000 9075700 6048500 19728000 14377 1111 13092 120460;120461;120462;120463;120464;120465;120466;120467;120468;120469;120470;120471;120472 96053;96054;96055;96056;96057;96058;96059;96060;96061;96062;96063 96060 11 ESDLPSAILQTSGVSEFTK Unmodified 2008.0001 6.61646E-05 4010 Q99459 CDC5L Cell division cycle 5-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 6.82 3.81 5 2 10 5 2 1 1 1 1 1 1 1 1 1 1 88.951 87.481 2;3 5.7363E-39 107969 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 171.73 149.26 665060000 0 611840000 6093200 0 2663600 1225200 1975100 2046000 2080100 10045000 5830400 5590400 1471200 0 14199000 14378 4010 13093 120473;120474;120475;120476;120477;120478;120479;120480;120481;120482;120483;120484;120485;120486;120487;120488;120489 96064;96065;96066;96067;96068;96069;96070;96071;96072;96073;96074;96075;96076;96077;96078;96079 96070 14 ESDLSHVQNK Unmodified 1155.552 0.55201537 322 O43390 HNRNPR Heterogeneous nuclear ribonucleoprotein R yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.92 3.43 5 2 19 1 4 2 1 2 1 2 1 2 2 1 2 2 1 2 10.543 9.8008 2;3 2.235E-78 12110 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 241.96 152.81 1009800000 7230800 928410000 9078700 4464400 848250 3775300 6515000 2717300 4380600 4437500 2542800 13788000 5885800 2586500 13122000 14379 322 13094 120490;120491;120492;120493;120494;120495;120496;120497;120498;120499;120500;120501;120502;120503;120504;120505;120506;120507;120508;120509;120510;120511;120512;120513;120514;120515 96080;96081;96082;96083;96084;96085;96086;96087;96088;96089;96090;96091;96092;96093 96082 11 ESDPFRGSATDDFFK Unmodified 1717.7584 0.75837933 4836 Q9UBC2 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 76.264 73.888 3 0.026461 84211 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 18.823 14.721 45643000 0 29968000 3701600 0 0 0 0 0 0 0 0 0 0 0 11974000 14380 4836 13095 120516;120517;120518 96094;96095 96094 2 ESDTGLAPPALWDLAADK Unmodified 1868.9156 0.91560825 1369 P35998 PSMC2 26S protease regulatory subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 92.19 91.118 2 2.1595E-10 108724 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 131.53 116.33 1774500000 118610000 1476300000 0 0 13523000 17366000 3428600 5428400 4797300 35303000 28012000 32442000 3988000 6541800 28739000 14381 1369 13096 120519;120520;120521;120522;120523;120524;120525;120526;120527;120528;120529;120530;120531;120532 96096;96097;96098;96099;96100;96101;96102;96103;96104;96105;96106;96107;96108;96109 96103 12 ESDTGLWLHNK Unmodified 1298.6255 0.62551466 4381 Q9H3P2 NELFA Negative elongation factor A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 45.352 45.468 3 0.035106 51095 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 26.012 19.038 73525000 0 0 0 6176700 5044200 7413400 7662700 4349500 5822100 6560900 7088200 0 8810800 7747000 6849300 14382 4381 13097 120533;120534;120535;120536;120537;120538;120539;120540;120541;120542;120543 96110 96110 1 ESDTPLQQVSIEEILEEQRVEQQTK Unmodified 2955.4673 0.46728927 254 O15116 LSM1 U6 snRNA-associated Sm-like protein LSm1 yes yes 0 0 1 By MS/MS 2 0 1 1 92.882 84.752 3 6.1476E-25 109807 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.633 82.437 14053000 14053000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14383 254 13098 120544 96111 96111 1 ESDVGFIPTSGLSGENLITR Unmodified 2091.0484 0.048413341 5184 Q9Y450 HBS1L HBS1-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.36 2.01 1 10 1 1 1 1 1 1 1 1 1 1 1 86.709 86.479 2 1.5333E-20 100095 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 123.02 108.14 53730000 0 5044500 0 0 2384400 4065700 2368400 0 2388000 6872200 5914400 7524400 0 5365800 11803000 14384 5184 13099 120545;120546;120547;120548;120549;120550;120551;120552;120553;120554;120555 96112;96113;96114;96115;96116;96117;96118;96119;96120 96115 9 ESDVGFIPTSGLSGENLITRSQSSELTK Unmodified 2951.4724 0.47237465 5184 Q9Y450 HBS1L HBS1-like protein yes yes 0 0 1 By MS/MS 2 0 1 1 86.47 84.038 3 4.0662E-07 101768 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 48.389 41.437 5438700 0 0 5438700 0 0 0 0 0 0 0 0 0 0 0 0 14385 5184 13100 120556 96121 96121 1 ESDWNQHK Unmodified 1042.4468 0.44682202 162 O00499 BIN1 Myc box-dependent-interacting protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 8.3606 5.0576 2 0.019798 7397 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.472 69.508 33516000 0 33516000 0 0 0 0 0 0 0 0 0 0 0 0 0 14386 162 13101 120557;120558 96122 96122 1 ESEALDSPNSK Unmodified 1175.5306 0.53061123 900 P0C7T5 ATXN1L Ataxin-1-like yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 14.449 14.534 2 0.0029858 13107 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 65.157 48.381 13795000 0 0 0 0 1654800 0 3110800 3794600 0 0 0 0 2587200 2647200 0 14387 900 13102 120559;120560;120561;120562;120563;120564 96123;96124;96125;96126 96125 4 ESEALPEK Unmodified 901.43928 0.43927702 2911 Q6NZI2 PTRF Polymerase I and transcript release factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 17.456 17.551 2 0.011003 17489 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 77.923 55.431 201290000 0 0 0 21624000 22252000 23784000 19506000 18346000 0 25437000 0 44630000 0 25714000 0 14388 2911 13103 120565;120566;120567;120568;120569;120570;120571;120572 96127;96128;96129;96130;96131;96132;96133;96134 96129 7 ESEAVEWQQK Unmodified 1232.5673 0.56733108 1198 P26038 MSN Moesin yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 34.228 33.025 2 0.00091114 35482 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 137.9 122.75 1970500000 50113000 1800300000 1312100 0 1825400 3573800 3376300 2315900 0 4384900 23073000 16278000 4166600 13315000 46424000 14389 1198 13104 120573;120574;120575;120576;120577;120578;120579;120580;120581;120582;120583;120584;120585;120586 96135;96136;96137;96138;96139;96140;96141;96142;96143 96136 9 ESEDFIVEQYK Unmodified 1385.6351 0.6350763 2415 Q14566 MCM6 DNA replication licensing factor MCM6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 64.364 63.081 2 3.3465E-29 79573 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 199.46 125.79 952740000 22530000 697620000 0 13008000 6652400 21980000 14212000 10865000 8849900 17791000 29009000 26492000 0 25408000 58318000 14390 2415 13105 120587;120588;120589;120590;120591;120592;120593;120594;120595;120596;120597;120598;120599;120600;120601 96144;96145;96146;96147;96148;96149;96150;96151;96152;96153;96154;96155;96156;96157;96158;96159;96160;96161;96162;96163 96150 20 ESEDHLKENTEK Unmodified 1457.6634 0.66341631 1322 P32519 ELF1 ETS-related transcription factor Elf-1 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 88.833 84.791 3 0.0093045 105379 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 45.915 13.907 13680000 0 13680000 0 0 0 0 0 0 0 0 0 0 0 0 0 14391 1322 13106 120602;120603 96164 96164 1 ESEDKPEIEDVGSDEEEEK Unmodified 2191.9128 0.91282688 850 P07900 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 39.406 38.255 3 4.9974E-17 42098 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.767 57.816 162590000 31374000 75159000 0 8987000 0 7416100 0 0 0 5368500 8994400 0 4004300 4924400 16359000 14392 850 13107 120604;120605;120606;120607;120608;120609;120610;120611;120612 96165;96166;96167;96168;96169;96170;96171;96172;96173;96174;96175 96170 11 ESEDKPEIEDVGSDEEEEKK Unmodified 2320.0078 0.007789897 850 P07900 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 0 0 2 By MS/MS By matching By matching By matching By MS/MS 6.8 3.92 2 3 1 1 1 1 1 35.104 33.107 4 0.011779 35844 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 29.818 24.941 82209000 42422000 25420000 0 0 0 0 0 0 0 0 5219800 0 0 2377200 6769500 14393 850 13108 120613;120614;120615;120616;120617 96176;96177 96176 1 ESEDSTDFNDK Unmodified 1285.4946 0.49461965 5143 Q9Y399 MRPS2 28S ribosomal protein S2, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 16.342 16.547 2 0.0016512 15328 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.349 68.093 25123000 0 0 0 1560300 1711500 2482100 0 0 0 1874300 2089400 3936500 3141400 3117400 5209600 14394 5143 13109 120618;120619;120620;120621;120622;120623;120624;120625;120626 96178;96179;96180;96181;96182;96183;96184 96180 7 ESEEEVGPTK Unmodified 1103.4982 0.49824846 360 O43719 HTATSF1 HIV Tat-specific factor 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 12.639 12.674 2 0.01172 10682 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 73.985 49.83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14395 360 13110 120627;120628 96185;96186 96185 2 ESEEGNPVR Unmodified 1015.4571 0.45705235 360 O43719 HTATSF1 HIV Tat-specific factor 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 9.5297 9.7061 2 0.029484 8155 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.561 37.688 9515200 0 0 0 0 604250 0 0 895800 0 721230 0 2213500 1775200 1623800 1681400 14396 360 13111 120629;120630;120631;120632;120633;120634;120635 96187 96187 1 ESEEGNPVRGSEEDSPK Unmodified 1844.8024 0.80242899 360 O43719 HTATSF1 HIV Tat-specific factor 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 21.101 16.835 3 0.004184 22628 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 46.319 38.91 9918700 2681300 7237400 0 0 0 0 0 0 0 0 0 0 0 0 0 14397 360 13112 120636;120637 96188 96188 1 ESEEGNPVRGSEEDSPKK Unmodified 1972.8974 0.89739201 360 O43719 HTATSF1 HIV Tat-specific factor 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 13.481 13.3 3 2.1472E-14 12082 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.021 72.241 77272000 8662900 0 0 1342100 3849100 2465400 3888000 2901200 1998300 5165700 6641900 8374700 12400000 9855600 9727200 14398 360 13113 120638;120639;120640;120641;120642;120643;120644;120645;120646;120647;120648;120649;120650 96189;96190;96191;96192;96193;96194;96195;96196 96191 8 ESEEPNQGNNAAADTGHR Unmodified 1895.7994 0.7994093 4439 Q9H7Z3 NRDE2 Protein NRDE2 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 10.599 10.717 3 0.017626 8762 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 28.083 26.165 19636000 0 0 0 2250400 1721600 3043800 0 0 0 1928900 0 2952000 2290700 2276500 3171800 14399 4439 13114 120651;120652;120653;120654;120655;120656;120657;120658 96197 96197 1 ESEFDDEPK Unmodified 1094.4404 0.44039923 5122 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.388 23.591 2 0.0032698 24116 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 93.162 84.744 228920000 0 0 0 11601000 11502000 10571000 12365000 12023000 8879900 19142000 20694000 32157000 38267000 23965000 27748000 14400 5122 13115 120659;120660;120661;120662;120663;120664;120665;120666;120667;120668;120669;120670 96198;96199;96200;96201;96202;96203;96204;96205;96206;96207 96202 10 ESEGALNEHMTSLASVLK Unmodified 1914.9357 0.93569177 650 O95376 ARIH2 E3 ubiquitin-protein ligase ARIH2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 83.547 79.93 3 0.012271 96713 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 32.181 27.279 72225000 0 66899000 5325300 0 0 0 0 0 0 0 0 0 0 0 0 14401 650 13116 120671;120672 96208 96208 1 ESEGEEEDEDEDLSK Unmodified 1738.6541 0.654093 627 O95218 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 4 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 22.132 21.205 2;3 0 22514 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 262.54 261.57 227650000 8883500 15670000 0 8933800 8777500 14811000 8441700 12790000 10170000 16134000 19349000 26800000 22107000 22696000 32091000 14402 627 13117 120673;120674;120675;120676;120677;120678;120679;120680;120681;120682;120683;120684;120685;120686;120687;120688 96209;96210;96211;96212;96213;96214;96215;96216;96217;96218;96219;96220;96221;96222;96223;96224 96214 16 ESEHTGPGWESAR Unmodified 1441.6222 0.6222202 3301 Q8N0X7 SPG20 Spartin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.067 22.272 3 5.5691E-10 23141 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 92.295 84.54 1175300000 0 0 0 61696000 61339000 71591000 54795000 101260000 69860000 121640000 106780000 153480000 154420000 108840000 109580000 14403 3301 13118 120689;120690;120691;120692;120693;120694;120695;120696;120697;120698;120699;120700 96225;96226;96227;96228;96229;96230;96231;96232;96233;96234;96235;96236 96233 10 ESEHTGPGWESARQMQQK Unmodified 2084.9334 0.93340036 3301 Q8N0X7 SPG20 Spartin yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 36.077 31.156 3 0.00158 43436 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.376 40.818 24245000 20961000 0 3283200 0 0 0 0 0 0 0 0 0 0 0 0 14404 3301 13119 120701;120702 96237 96237 1 ESEIIDFFLGASLK Unmodified 1567.8134 0.81337501 1027 P15880 RPS2 40S ribosomal protein S2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 2 3 1 100.68 96.2 2 8.0262E-24 119712 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 131.43 95.008 81139000 60355000 19682000 1102400 0 0 0 0 0 0 0 0 0 0 0 0 14405 1027 13120 120703;120704;120705;120706;120707;120708 96238;96239;96240;96241;96242;96243 96242 6 ESEIIDFFLGASLKDEVLK Unmodified 2152.1304 0.13035206 1027 P15880 RPS2 40S ribosomal protein S2 yes yes 0 0 1 By MS/MS 3 0 1 1 99.656 96.11 3 0.00094698 99968 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 49.224 39.818 2526000 2526000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14406 1027 13121 120709 96244;96245 96244 2 ESEIQYLK Unmodified 1008.5128 0.51277632 2990 Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 46.478 43.684 2 0.026665 56312 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.116 40.878 19900000 0 11573000 0 0 0 0 8326500 0 0 0 0 0 0 0 0 14407 2990 13122 120710;120711 96246;96247 96247 2 ESEITDEDIDGILER Unmodified 1732.8003 0.80030372 389 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS 10 0 5 1 1 1 1 1 80.129 80.12 2 7.6918E-05 92618 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 77.305 70.772 14993000 0 0 0 1466500 0 2825100 0 0 0 0 0 4376600 0 0 6324500 14408 389 13123 120712;120713;120714;120715;120716 96248;96249;96250 96250 3 ESEITDEDIDGILERGAK Unmodified 1988.9538 0.95384425 389 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes yes 0 0 1 By MS/MS 2 0 1 1 82.939 74.809 3 5.6493E-05 97756 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.41 60.899 23919000 23919000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14409 389 13124 120717 96251 96251 1 ESELGDRPLQVGER Unmodified 1583.7903 0.79034816 28 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 43.677 44.425 3 0.00024876 49318 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 62.378 52.456 43906000 0 0 0 0 0 0 0 0 0 0 0 18276000 0 0 25630000 14410 28 13125 120718;120719;120720 96252;96253;96254;96255 96254 4 ESELKPLVGESR Unmodified 1342.7092 0.70924429 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 40.307 40.477 3 0.036932 45853 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 24.935 19.781 323510000 0 0 0 22667000 23188000 17908000 28966000 27926000 18300000 36020000 39475000 54978000 34414000 0 19668000 14411 3023 13126 120721;120722;120723;120724;120725;120726;120727;120728;120729;120730;120731 96256;96257 96257 1 ESELLALQTK Unmodified 1130.6183 0.61830402 250 O15083 ERC2 ERC protein 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.5 3.55 1 1 4 2 1 1 1 1 65.039 63.4 2 2.1246E-05 81305 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.82 0 178040000 0 156800000 0 0 0 4647100 0 4413200 0 0 5126300 0 7055900 0 0 14412 250 13127 120732;120733;120734;120735;120736;120737 96258;96259;96260;96261;96262;96263 96260 6 ESELPADLEMVEK Unmodified 1488.7018 0.70177565 3247 Q8IWV8 UBR2 E3 ubiquitin-protein ligase UBR2 yes yes 0 0 0 By MS/MS 2 0 1 1 79.92 75.208 2 0.034416 93710 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.274 48.269 56591000 0 56591000 0 0 0 0 0 0 0 0 0 0 0 0 0 14413 3247 13128 120738 96264 96264 1 ESELPRRVNSASSSNPPAEVDPDTILK Unmodified 2907.4574 0.45739329 4243 Q9BY77 POLDIP3 Polymerase delta-interacting protein 3 yes yes 0 0 2 By MS/MS 2 0 1 1 72.568 69.483 4 0.013031 85098 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 22.716 19.887 3114400 0 0 3114400 0 0 0 0 0 0 0 0 0 0 0 0 14414 4243 13129 120739 96265 96265 1 ESEMNAIAADMCTNAR Unmodified 1782.7335 0.73350326 3966 Q96RE7 NACC1 Nucleus accumbens-associated protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 67.557 68.074 2 0.0061659 77506 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.767 21.987 10137000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10137000 14415 3966 13130 120740 96266 96266 1 ESENLASGDQPR Unmodified 1301.5848 0.58477206 4727 Q9NXH9 TRMT1 tRNA (guanine(26)-N(2))-dimethyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.195 19.391 2 3.0326E-08 18558 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 130.98 86.119 94951000 0 0 0 4100800 3908600 4147200 5363200 3156900 3541000 6811700 9046500 15027000 9809600 9320100 20718000 14416 4727 13131 120741;120742;120743;120744;120745;120746;120747;120748;120749;120750;120751;120752 96267;96268;96269;96270;96271;96272;96273;96274;96275;96276;96277;96278;96279;96280 96270 14 ESEPAEEVK Unmodified 1016.4662 0.46622005 895 P09884 POLA1 DNA polymerase alpha catalytic subunit yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.698 13.86 2 0.0054364 13343 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 77.732 41.337 83293000 0 0 0 4603200 3249700 7549200 4583400 5245300 4962800 8481500 7821100 8202100 7634900 8014800 12945000 14417 895 13132 120753;120754;120755;120756;120757;120758;120759;120760;120761;120762;120763;120764 96281;96282;96283;96284;96285;96286 96286 4 ESEPAEEVKQEADSGK Unmodified 1731.7799 0.77990263 895 P09884 POLA1 DNA polymerase alpha catalytic subunit yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 32.51 28.003 3 0.023588 36704 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 43.794 34.973 13208000 0 13208000 0 0 0 0 0 0 0 0 0 0 0 0 0 14418 895 13133 120765;120766 96287 96287 0 ESEPAPASVTALTDAR Unmodified 1613.7897 0.78967946 2041 Q00613 HSF1 Heat shock factor protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 63.306 63.652 2 1.7006E-19 71785 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 125.54 119.16 174480000 0 0 0 0 0 0 0 0 0 0 34719000 28275000 33501000 28830000 49152000 14419 2041 13134 120767;120768;120769;120770;120771;120772;120773 96288;96289;96290;96291;96292;96293;96294;96295 96292 8 ESEPEPDVRK Unmodified 1184.5673 0.56733108 342 O43572 AKAP10 A-kinase anchor protein 10, mitochondrial yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 13.558 13.73 3 0.005009 12890 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 42.718 35.829 46074000 0 0 0 3877000 4470300 430690 0 5608000 0 0 4936800 8432900 9017200 0 9301300 14420 342 13135 120774;120775;120776;120777;120778;120779;120780;120781 96296;96297 96297 2 ESEPGSSASFGK Unmodified 1181.52 0.52004654 450 O60942 RNGTT mRNA-capping enzyme;Polynucleotide 5'-triphosphatase;mRNA guanylyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.208 22.413 2 0.0054225 23280 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 67.334 50.876 115820000 0 0 0 4166300 7125500 7561500 7362500 10817000 9230700 9844400 10262000 15969000 12616000 11617000 9248300 14421 450 13136 120782;120783;120784;120785;120786;120787;120788;120789;120790;120791;120792;120793 96298;96299;96300;96301;96302;96303 96299 6 ESEPQAAAEPAEAK Unmodified 1426.6576 0.65760265 1993 P80723 BASP1 Brain acid soluble protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.88 3.69 2 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 33.081 33.044 2 7.6946E-31 92470 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 148.76 137.05 2781900000 569910000 625090000 0 62429000 76899000 83782000 68312000 85502000 72840000 135330000 205390000 271820000 143340000 157450000 223790000 14422 1993 13137 120794;120795;120796;120797;120798;120799;120800;120801;120802;120803;120804;120805;120806;120807;120808;120809 96304;96305;96306;96307;96308;96309;96310;96311;96312;96313;96314;96315;96316;96317;96318;96319;96320 96311 16 ESESAPGDFSLSVK Unmodified 1451.678 0.67800374 1934 P62993 GRB2 Growth factor receptor-bound protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 2 1 1 1 1 64.297 64.408 2 0.001387 73014 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.34 57.673 111510000 0 0 0 4131300 3222700 5068400 3916800 3650400 3650800 9417300 28053000 16165000 5081200 7751300 21405000 14423 1934 13138 120810;120811;120812;120813;120814;120815;120816;120817;120818;120819;120820;120821;120822 96321;96322;96323;96324;96325;96326 96323 6 ESESASVIEK Unmodified 1077.519 0.51898391 5379 yes yes 0 0 0 By MS/MS 2 0 2 2 7.1077 4.8805 2 0.024172 6788 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 61.999 1.089 + 26886000 0 0 26886000 0 0 0 0 0 0 0 0 0 0 0 0 14424 5379 13139 120823;120824 96327 96327 1 ESESEEAEAGAAELR Unmodified 1576.6853 0.68527397 3382 Q8NAF0 ZNF579 Zinc finger protein 579 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 43.191 43.452 2 6.1136E-23 47781 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 120.96 81.938 37762000 0 0 0 0 4520600 0 3378100 2679900 0 0 0 9526000 5799100 5584100 6274600 14425 3382 13140 120825;120826;120827;120828;120829;120830;120831;120832 96328;96329;96330;96331;96332;96333;96334 96330 7 ESETSREDEYK Unmodified 1371.579 0.57901798 232 O14974 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 8.4311 8.0666 2;3 0.0014201 5809 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 69.216 53.326 117240000 0 11324000 0 6087900 4654300 3673700 6190900 4714200 8568500 9519200 19995000 13239000 11800000 8330600 9144700 14426 232 13141 120833;120834;120835;120836;120837;120838;120839;120840;120841;120842;120843;120844;120845;120846 96335;96336;96337;96338;96339;96340;96341 96338 6 ESEVLIGNLGDK Unmodified 1272.6561 0.65614609 3733 Q96A65 EXOC4 Exocyst complex component 4 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63.957 62.795 2 2.2979E-05 71555 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 102.52 84.212 172620000 4418800 51968000 1063000 6477100 0 10196000 9833900 7910300 6623900 14251000 10585000 14484000 8315500 9688700 16808000 14427 3733 13142 120847;120848;120849;120850;120851;120852;120853;120854;120855;120856;120857;120858;120859;120860 96342;96343;96344;96345;96346;96347;96348;96349;96350;96351;96352;96353 96352 12 ESEVVMK Oxidation (M) 836.39497 0.39496937 4653 Q9NUQ8 ABCF3 ATP-binding cassette sub-family F member 3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.2005 7.3242 2 0.033158 5509 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 62.715 17.742 69777000 0 0 0 4332500 3418500 6228500 5010800 3638300 3488900 8455300 10312000 4444100 8010200 6001700 6436100 14428 4653 13143 120861;120862;120863;120864;120865;120866;120867;120868;120869;120870;120871;120872 96354;96355 96355 2 ESEVVMK Unmodified 820.40005 0.40005474 4653 Q9NUQ8 ABCF3 ATP-binding cassette sub-family F member 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 16.726 16.875 2 0.048847 15342 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 64.803 27.158 71070000 0 0 0 3056400 5210900 7154600 7380700 6741300 6895700 6685800 9657700 0 7357500 9571000 1358200 14429 4653 13143 120873;120874;120875;120876;120877;120878;120879;120880;120881;120882;120883 96356 96356 1 ESFADVLPEAAALVK Unmodified 1558.8243 0.82427405 2810 Q5VT52 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 93.174 93.249 2 0.0010829 108355 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 59.418 53.572 122930000 0 0 0 1060400 3899100 3587200 3970000 9720300 6486300 24556000 15645000 11751000 3750100 10100000 28406000 14430 2810 13144 120884;120885;120886;120887;120888;120889;120890;120891;120892;120893;120894;120895 96357;96358;96359;96360;96361;96362;96363;96364 96360 8 ESFDGSVR Unmodified 895.40356 0.40356022 1085 P19338 NCL Nucleolin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.717 22.923 2 0.011003 24016 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 77.923 34.799 823310000 0 0 0 42826000 32965000 34715000 44639000 43166000 44098000 70145000 96561000 136040000 87562000 87784000 102810000 14431 1085 13145 120896;120897;120898;120899;120900;120901;120902;120903;120904;120905;120906;120907 96365;96366;96367;96368;96369;96370;96371;96372;96373 96366 4 ESFEGQMTEDNIEVGICNEAGFRR Unmodified 2787.2228 0.22284202 1194 P25787 PSMA2 Proteasome subunit alpha type-2 yes yes 0 0 1 By MS/MS 2 0 1 1 83.792 75.661 3 9.4393E-08 98950 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.917 67.427 10293000 10293000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14432 1194 13146 120908 96374 96374 1 ESFEGQMTEDNIEVGICNEAGFRRLTPTEVK Oxidation (M) 3571.6559 0.65591145 1194 P25787 PSMA2 Proteasome subunit alpha type-2 yes yes 0 1 2 By MS/MS 2 0 1 1 84.7 76.57 4 1.7191E-58 99993 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 112.39 110.53 25442000 25442000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14433 1194 13147 120909 96375 96375 1728 1 ESFEGQMTEDNIEVGICNEAGFRRLTPTEVK Unmodified 3555.661 0.66099683 1194 P25787 PSMA2 Proteasome subunit alpha type-2 yes yes 0 0 2 By MS/MS 2 0 1 1 87.604 79.474 4 8.7029E-21 103424 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.752 76.962 50932000 50932000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14434 1194 13147 120910 96376 96376 1 ESFESQFLADTER Unmodified 1557.6947 0.69471644 2328 Q13616 CUL1 Cullin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 77.225 77.273 2 1.6058E-13 88754 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 141.1 130.51 70777000 0 0 0 2545600 2410600 9586600 0 4675000 3006000 7648100 9999400 9307100 0 7630700 13968000 14435 2328 13148 120911;120912;120913;120914;120915;120916;120917;120918;120919;120920;120921 96377;96378;96379;96380;96381;96382;96383;96384;96385;96386;96387 96379 11 ESFETFINK Unmodified 1113.5342 0.53424004 2331 Q13619 CUL4A Cullin-4A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66.863 66.264 2 0.00035066 84110 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.57 75.934 927650000 0 681280000 17511000 8027300 8594400 24278000 15539000 14591000 10051000 21039000 24228000 24762000 15416000 20068000 42258000 14436 2331 13149 120922;120923;120924;120925;120926;120927;120928;120929;120930;120931;120932;120933;120934;120935 96388;96389;96390;96391;96392;96393;96394;96395;96396;96397;96398;96399;96400;96401;96402 96391 15 ESFLVTGSQDCTVK Unmodified 1569.7345 0.73447277 2188 Q12788 TBL3 Transducin beta-like protein 3 yes yes 0 0 0 By matching By MS/MS By matching 2 0 3 1 1 1 62.516 56.531 2 0.0081201 72845 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.043 66.51 46290000 4406600 37936000 3947500 0 0 0 0 0 0 0 0 0 0 0 0 14437 2188 13150 120936;120937;120938 96403 96403 1 ESFNPESYELDK Unmodified 1456.6358 0.63580458 1610 P49903 SEPHS1 Selenide, water dikinase 1 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 64.308 64.396 2 3.8648E-05 73140 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.827 84.391 123630000 0 0 0 4353400 4217400 15783000 0 4668100 5500000 12220000 12439000 13378000 5901200 14126000 31045000 14438 1610 13151 120939;120940;120941;120942;120943;120944;120945;120946;120947;120948;120949 96404;96405 96404 2 ESFREQDIYLPIANVAR Unmodified 2020.0378 0.037789075 1184 P25208 NFYB Nuclear transcription factor Y subunit beta yes yes 0 0 1 By MS/MS 10 0 1 1 82.984 83.175 3 0.00021465 96039 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.646 53.827 12556000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12556000 14439 1184 13152 120950 96406 96406 1 ESFSLVQVQPGVDIIR Unmodified 1785.9625 0.96249887 1502 P46379 BAG6 Large proline-rich protein BAG6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 1 2 1 2 1 1 1 2 2 88.151 88.267 2;3 7.8211E-42 102353 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 160.18 150.75 142110000 0 0 0 0 5288600 8247800 4415900 14693000 5223500 23088000 13020000 10113000 5136100 13423000 39459000 14440 1502 13153 120951;120952;120953;120954;120955;120956;120957;120958;120959;120960;120961;120962;120963;120964;120965 96407;96408;96409;96410;96411;96412;96413;96414;96415;96416;96417;96418;96419;96420 96408 14 ESFVDQVR Unmodified 978.47706 0.47705951 4393 Q9H4A3 WNK1 Serine/threonine-protein kinase WNK1 yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 42.052 42.24 2 0.022757 47276 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 60.895 17.895 471380000 0 0 0 24304000 26928000 0 36491000 36349000 32412000 43806000 48949000 60501000 53996000 45032000 62609000 14441 4393 13154 120966;120967;120968;120969;120970;120971;120972;120973;120974;120975;120976 96421 96421 1 ESGAINTSLFVLGK Unmodified 1434.7718 0.77184455 2449 Q14807 KIF22 Kinesin-like protein KIF22 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 85.194 83.689 2 0.0042966 96465 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 83.862 69.926 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14442 2449 13155 120977;120978;120979 96422;96423;96424 96423 3 ESGASVDEVAR Unmodified 1118.5204 0.52038089 1631 P50579 METAP2 Methionine aminopeptidase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.538 22.743 2 1.3572E-08 22882 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 137.13 121.47 424360000 0 0 0 15995000 11775000 28214000 19470000 16590000 16878000 43401000 58133000 62812000 38621000 43511000 68959000 14443 1631 13156 120980;120981;120982;120983;120984;120985;120986;120987;120988;120989;120990;120991 96425;96426;96427;96428;96429;96430;96431;96432;96433;96434;96435;96436 96428 4 ESGASVDEVARQLER Unmodified 1644.8067 0.80672651 1631 P50579 METAP2 Methionine aminopeptidase 2 yes yes 0 0 1 By MS/MS 3 0 1 1 65.975 61.268 3 0.023873 75182 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 35.757 27.976 5264100 0 5264100 0 0 0 0 0 0 0 0 0 0 0 0 0 14444 1631 13157 120992 96437 96437 1 ESGASVDEVARQLERSALEDK Unmodified 2288.1244 0.12443183 1631 P50579 METAP2 Methionine aminopeptidase 2 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 1 3 2 84.787 80.478 3;4 6.7975E-10 101804 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.22 57.833 226140000 57838000 148050000 20252000 0 0 0 0 0 0 0 0 0 0 0 0 14445 1631 13158 120993;120994;120995;120996;120997;120998 96438;96439;96440;96441 96441 2 ESGEEYESGSGSNSWER Unmodified 1888.7347 0.73474335 95 CON__Q5D862;Q5D862 FLG2 Filaggrin-2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 35.907 36.04 2 2.8859E-28 39775 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 139.89 139.89 + 63939000 0 0 0 8816100 4565100 3709200 4086300 6946600 2426200 7865000 5163700 10280000 6204600 3875400 0 14446 95 13159 120999;121000;121001;121002;121003;121004;121005;121006;121007;121008;121009 96442;96443;96444;96445;96446;96447;96448;96449;96450;96451;96452 96443 11 ESGELYYSIEK Unmodified 1316.6136 0.61361257 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 62.33 56.436 2 0.0019445 72270 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.18 61.959 149230000 0 149230000 0 0 0 0 0 0 0 0 0 0 0 0 0 14447 2203 13160 121010 96453 96453 1 ESGFSYPNFSLPAANGLSSGVGGGGGK Unmodified 2513.1823 0.18228106 1600 P49790 NUP153 Nuclear pore complex protein Nup153 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 2 2 2 2 2 87.502 87.611 2;3 3.0251E-06 101592 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 36.928 29.482 62872000 0 0 0 0 2442900 3040700 0 0 3291600 13202000 7803800 8986900 0 4197200 19906000 14448 1600 13161 121011;121012;121013;121014;121015;121016;121017;121018;121019;121020;121021;121022;121023 96454;96455;96456;96457;96458;96459;96460;96461;96462;96463 96455 10 ESGLISTK Unmodified 833.44945 0.44944778 4701 Q9NWT1 PAK1IP1 p21-activated protein kinase-interacting protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 24.539 20.41 2 0.042482 27003 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.628 25.233 36212000 0 36212000 0 0 0 0 0 0 0 0 0 0 0 0 0 14449 4701 13162 121024 96464 96464 1 ESGNDTIDEEELILPNR Unmodified 1942.912 0.91197944 3631 Q92576 PHF3 PHD finger protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.953 77.014 2 1.1309E-31 88456 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 122.45 108.78 139260000 0 0 0 6015600 8561500 9803100 10387000 10052000 9321000 12303000 14383000 17270000 9658500 11622000 19884000 14450 3631 13163 121025;121026;121027;121028;121029;121030;121031;121032;121033;121034;121035;121036 96465;96466;96467;96468;96469;96470;96471;96472;96473;96474;96475 96468 11 ESGPLESEAMVMGILK Oxidation (M) 1705.8267 0.82665859 3281 Q8IYB7 DIS3L2 DIS3-like exonuclease 2 yes yes 0 1 0 By MS/MS 2 0 2 2 90.55 85.659 2 6.0077E-07 107472 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.4 72.633 43340000 0 43340000 0 0 0 0 0 0 0 0 0 0 0 0 0 14451 3281 13164 121037;121038 96476;96477 96477 4883;4884 2 ESGPLESEAMVMGILK 2 Oxidation (M) 1721.8216 0.82157321 3281 Q8IYB7 DIS3L2 DIS3-like exonuclease 2 yes yes 0 2 0 By MS/MS 3 0 1 1 79.622 76.251 2 0.015268 91588 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 47.302 30.67 4989400 0 4989400 0 0 0 0 0 0 0 0 0 0 0 0 0 14452 3281 13164 121039 96478 96478 4883;4884 1 ESGPSGIETELR Unmodified 1273.615 0.61500956 3467 Q8NI36 WDR36 WD repeat-containing protein 36 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 2 1 50.302 50.234 2 0.00032657 56742 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 82.029 48.908 48702000 0 0 0 6762100 5656000 0 7754200 10625000 0 0 0 0 7643200 10262000 0 14453 3467 13165 121040;121041;121042;121043;121044;121045;121046 96479;96480;96481;96482;96483;96484;96485;96486 96479 8 ESGQVVAIK Unmodified 929.5182 0.51819605 2250 Q13188 STK3 Serine/threonine-protein kinase 3;Serine/threonine-protein kinase 3 36kDa subunit;Serine/threonine-protein kinase 3 20kDa subunit yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 31.47 27.605 2 0.028394 36116 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.981 34.43 69928000 0 69550000 378040 0 0 0 0 0 0 0 0 0 0 0 0 14454 2250 13166 121047;121048 96487 96487 1 ESGRFQDVGPQAPVGSVYQK Unmodified 2148.06 0.05998108 4940 Q9UJU6 DBNL Drebrin-like protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 58.58 58.022 3 0.00083778 72095 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 31.358 26.648 48474000 0 0 21842000 0 0 0 0 0 0 0 7753800 10210000 0 0 8668400 14455 4940 13167 121049;121050;121051;121052 96488;96489;96490 96489 3 ESGSTLDLSGSR Unmodified 1207.5681 0.56805936 5005 Q9ULU4 ZMYND8 Protein kinase C-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 33.429 33.562 2 0.002699 36629 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 62.408 42.621 73157000 0 0 0 6196800 7732900 7430000 6106200 6299500 5801800 0 8471200 0 7402900 9756000 7959700 14456 5005 13168 121053;121054;121055;121056;121057;121058;121059;121060;121061;121062 96491;96492;96493;96494;96495;96496;96497;96498;96499 96496 8 ESGVDIAAGNMLVK Oxidation (M) 1418.7075 0.70752973 1134 P22102 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.18 3.74 3 1 7 1 2 1 1 1 1 1 1 1 1 61.448 59.53 2 2.85E-44 72339 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 171.87 158.42 1164600000 24292000 955770000 8736000 0 0 27895000 19679000 0 0 24742000 24555000 0 18113000 21863000 38935000 14457 1134 13169 121063;121064;121065;121066;121067;121068;121069;121070;121071;121072;121073 96500;96501;96502;96503;96504;96505;96506;96507;96508;96509;96510;96511;96512;96513 96507 1622 14 ESGVDIAAGNMLVK Unmodified 1402.7126 0.71261511 1134 P22102 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 77.436 72.213 2 8.5208E-07 90963 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.82 103.61 1906800000 28944000 1871100000 6760100 0 0 0 0 0 0 0 0 0 0 0 0 14458 1134 13169 121074;121075;121076 96514;96515;96516;96517 96514 4 ESGVFEGIPTYR Unmodified 1353.6565 0.65648044 3531 Q8WTV0 SCARB1 Scavenger receptor class B member 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 73.733 73.719 2 0.0023783 85070 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 63.283 44.503 47601000 0 0 0 3369100 5639100 8909400 5409700 7076100 5164400 6015300 6017900 0 0 0 0 14459 3531 13170 121077;121078;121079;121080;121081;121082;121083;121084 96518;96519;96520;96521;96522;96523 96519 6 ESGVGQININDNYLVGLK Unmodified 1931.9953 0.99525556 2429 Q14678 KANK1 KN motif and ankyrin repeat domain-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 88.411 83.569 2 1.461E-05 103818 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.52 100.29 32469000 0 32469000 0 0 0 0 0 0 0 0 0 0 0 0 0 14460 2429 13171 121085 96524 96524 1 ESGVGQTDWSGVEAGEFLK Unmodified 1994.9222 0.92215019 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.854 82.918 2 2.9487E-24 95657 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 103.21 89.467 116380000 0 0 0 1985700 8139100 9300700 5078700 10239000 8167500 11893000 12661000 14118000 6076600 8861100 19857000 14461 4285 13172 121086;121087;121088;121089;121090;121091;121092;121093;121094;121095;121096;121097 96525;96526;96527;96528;96529;96530;96531;96532;96533;96534;96535;96536;96537 96529 13 ESHEMGQALQQAR Unmodified 1483.6838 0.6837746 3964 Q96R06 SPAG5 Sperm-associated antigen 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.118 27.315 3 0.0018333 29174 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 56.493 50.769 109380000 0 0 0 4827400 5428200 11171000 5260300 7680300 5470400 8373200 12248000 12472000 9392400 11163000 15898000 14462 3964 13173 121098;121099;121100;121101;121102;121103;121104;121105;121106;121107;121108;121109 96538;96539;96540;96541;96542;96543;96544;96545;96546 96543 9 ESHEMGQALQQAR Oxidation (M) 1499.6787 0.67868922 3964 Q96R06 SPAG5 Sperm-associated antigen 5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 12.877 13.131 3 0.00025457 12338 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 68.515 61.935 22575000 0 0 0 0 0 0 0 0 0 6537900 0 8613500 7424000 0 0 14463 3964 13173 121110;121111;121112 96547;96548;96549 96547 5446 3 ESHRLPVDIAYK Unmodified 1426.7569 0.75686319 1029 P15924 DSP Desmoplakin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.71 1.48 1 27 1 3 2 3 3 2 3 2 2 2 2 2 1 52.461 52.255 3 1.7917E-22 74667 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 138.02 107.29 701300000 47501000 0 0 68464000 17387000 74048000 30435000 63645000 41031000 39769000 55635000 110060000 58039000 42010000 53273000 14464 1029 13174 121113;121114;121115;121116;121117;121118;121119;121120;121121;121122;121123;121124;121125;121126;121127;121128;121129;121130;121131;121132;121133;121134;121135;121136;121137;121138;121139;121140 96550;96551;96552;96553;96554;96555;96556;96557;96558;96559;96560;96561;96562;96563;96564;96565;96566;96567;96568;96569;96570;96571;96572;96573;96574 96560 23 ESHSPFGLDSFNSTAK Unmodified 1722.7849 0.78492843 3061 Q7LBC6 KDM3B Lysine-specific demethylase 3B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.08 2.5 2 1 22 2 1 1 1 2 2 2 2 2 2 2 2 2 2 67.294 66.904 2;3 3.4131E-113 76368 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 157.23 153.51 851180000 0 83810000 21716000 29860000 31523000 60568000 49453000 64237000 42677000 63364000 75598000 91429000 72276000 69333000 95332000 14465 3061 13175 121141;121142;121143;121144;121145;121146;121147;121148;121149;121150;121151;121152;121153;121154;121155;121156;121157;121158;121159;121160;121161;121162;121163;121164;121165 96575;96576;96577;96578;96579;96580;96581;96582;96583;96584;96585;96586;96587;96588;96589;96590;96591 96579 12 ESHTAVVYTEK Unmodified 1262.6143 0.61428128 1663 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 2 2 1 1 1 1 1 1 1 19.324 19.505 3 0.00040949 20258 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 78.488 61.463 374500000 0 0 0 30136000 27240000 34058000 32448000 28262000 24711000 0 39069000 50378000 34859000 32309000 41032000 14466 1663 13176 121166;121167;121168;121169;121170;121171;121172;121173;121174;121175;121176;121177;121178;121179 96592;96593;96594;96595;96596;96597;96598;96599;96600;96601;96602;96603;96604;96605 96594 13 ESHVPYRNSK Unmodified 1215.5996 0.59963426 4199 Q9BW19 KIFC1 Kinesin-like protein KIFC1 yes yes 0 0 1 By MS/MS 2 0 1 1 10.261 6.486 2 0.021526 10561 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.302 81.265 7273400 7273400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14467 4199 13177 121180 96606 96606 1 ESIEEPSAK Unmodified 988.47131 0.47130543 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 2 1 1 1 1 1 1 1 1 1 19.601 19.784 2 0.003237 19001 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.709 55.885 291220000 0 0 0 20587000 22147000 24347000 0 23649000 14356000 28469000 26658000 33635000 29485000 28612000 39277000 14468 528 13178 121181;121182;121183;121184;121185;121186;121187;121188;121189;121190;121191;121192 96607;96608;96609;96610;96611;96612;96613;96614;96615;96616;96617;96618 96609 12 ESIESEIRR Unmodified 1117.5728 0.57275081 1755 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 32.239 32.801 2 0.027931 35677 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 105.57 62.321 142980000 0 0 0 0 0 0 0 0 0 0 28836000 27727000 8728800 0 77685000 14469 1755 13179 121193;121194;121195;121196 96619;96620 96620 1 ESIGSELGNSFASNIR Unmodified 1679.8115 0.81147753 2834 Q5VZL5 ZMYM4 Zinc finger MYM-type protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 77.71 77.756 2 7.7661E-05 89491 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 92.925 75.899 41476000 0 0 0 0 5506900 6978600 3338500 0 3929000 7675700 0 0 5171400 8875400 0 14470 2834 13180 121197;121198;121199;121200;121201;121202;121203 96621;96622;96623;96624;96625;96626 96623 5 ESILGGVLK Unmodified 914.54368 0.54368251 3933 Q96N67 DOCK7 Dedicator of cytokinesis protein 7 yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 78.887 72.434 2 0.03532 94957 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.565 20.442 26189000 7825000 18364000 0 0 0 0 0 0 0 0 0 0 0 0 0 14471 3933 13181 121204;121205 96627 96627 1 ESIQRVLQAVDK Unmodified 1384.7674 0.76742787 4478 Q9H9Y4 GPN2 GPN-loop GTPase 2 yes yes 0 0 1 By MS/MS 2 0 1 1 76.528 68.398 3 0.0080663 90167 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.343 32.676 15609000 15609000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14472 4478 13182 121206 96628 96628 1 ESIRRGHDDLGDHYLDCGDLSNALK Unmodified 2855.3257 0.32566761 2232 Q13098 GPS1 COP9 signalosome complex subunit 1 yes yes 0 0 2 By MS/MS 2 0 1 1 75.369 67.239 4 5.6995E-05 88864 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 44.3 41.026 17264000 17264000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14473 2232 13183 121207 96629 96629 1 ESISRPPPVDVR Unmodified 1350.7256 0.72556306 5050 Q9UPN6 SCAF8 Protein SCAF8 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.902 41.08 3 0.0019058 45759 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 62.042 53.297 356790000 0 0 0 14918000 19263000 22141000 23748000 23339000 23157000 26310000 38232000 46090000 38688000 30286000 50612000 14474 5050 13184 121208;121209;121210;121211;121212;121213;121214;121215;121216;121217;121218;121219 96630;96631;96632;96633;96634;96635;96636;96637;96638;96639;96640;96641;96642;96643;96644;96645;96646;96647;96648 96640 18 ESITDIIK Unmodified 917.50696 0.50696266 4041 Q99633 PRPF18 Pre-mRNA-splicing factor 18 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 72.956 67.92 2 0.033827 85942 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.26 16.99 52327000 0 52327000 0 0 0 0 0 0 0 0 0 0 0 0 0 14475 4041 13185 121220;121221 96649 96649 1 ESIVDVEGVVRK Unmodified 1328.73 0.72997974 1009 P14868 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 7.06 3.8 5 1 10 2 2 2 1 1 1 1 1 1 1 1 1 1 63.101 61.01 2;3 0.00011153 81559 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 119.16 93.217 442590000 71359000 99258000 112560000 8358000 0 14233000 13447000 11572000 8737000 17587000 17495000 0 14198000 15824000 37968000 14476 1009 13186 121222;121223;121224;121225;121226;121227;121228;121229;121230;121231;121232;121233;121234;121235;121236;121237 96650;96651;96652;96653;96654;96655;96656;96657;96658;96659;96660;96661;96662 96656 11 ESKDPADETEAD Unmodified 1305.5208 0.5208344 1043 P16949 STMN1 Stathmin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.64 3.73 1 3 10 2 1 1 1 1 1 1 1 1 1 1 1 1 17.546 17.357 2 0.00094459 11225 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.5 111.97 650510000 446380000 26542000 1605700 2967800 2948300 0 8560200 3377500 0 2708300 25375000 37072000 3773300 31078000 58118000 14477 1043 13187 121238;121239;121240;121241;121242;121243;121244;121245;121246;121247;121248;121249;121250;121251 96663;96664;96665;96666;96667 96663 3 ESLAEEHEGLVGEGQR Unmodified 1738.8122 0.81220581 2179 Q10570 CPSF1 Cleavage and polyadenylation specificity factor subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.408 40.588 3 0.00031196 45008 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 52.026 43.684 114570000 0 0 0 6070000 6979900 6893300 9649600 7514600 6829900 12379000 12327000 10764000 9442900 9806400 15913000 14478 2179 13188 121252;121253;121254;121255;121256;121257;121258;121259;121260;121261;121262;121263 96668;96669;96670;96671;96672;96673;96674;96675;96676;96677;96678 96671 11 ESLAESAAAYTK Unmodified 1239.5983 0.59829686 4428 Q9H6Z4 RANBP3 Ran-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.24 2 1 10 2 1 1 1 1 1 1 1 1 1 1 1 50.878 49.836 2 7.6972E-24 63190 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 166.97 138.76 655150000 0 437390000 4281300 9582600 10519000 0 14234000 14409000 11739000 18849000 41476000 0 23504000 23136000 46029000 14479 4428 13189 121264;121265;121266;121267;121268;121269;121270;121271;121272;121273;121274;121275;121276 96679;96680;96681;96682;96683;96684;96685;96686;96687;96688;96689;96690;96691;96692;96693;96694;96695 96682 17 ESLAFAQQHK Unmodified 1157.5829 0.58292157 2778 Q5T5Y3 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 33.204 29.933 2 0.043261 37816 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 54.157 43.743 1492700 0 0 1492700 0 0 0 0 0 0 0 0 0 0 0 0 14480 2778 13190 121277 96696 96696 1 ESLAGNKPANAVLHK Unmodified 1547.842 0.8419898 2201 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 31.656 31.087 3 0.0010024 45572 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.927 64.127 144830000 28679000 0 4773500 0 7884600 3767900 12596000 9727200 6263500 8529600 7870800 16649000 13761000 13361000 10969000 14481 2201 13191 121278;121279;121280;121281;121282;121283;121284;121285;121286;121287;121288;121289;121290 96697;96698 96698 1 ESLDDLTNLVVK Unmodified 1344.7137 0.71366097 1006 P14735 IDE Insulin-degrading enzyme yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 84.909 84.93 2 1.8487E-06 98070 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 114.4 89.626 49570000 0 0 0 13401000 2136000 3712600 0 5728300 1877000 0 0 0 3112200 4606000 14997000 14482 1006 13192 121291;121292;121293;121294;121295;121296;121297;121298 96699;96700;96701;96702;96703;96704 96700 6 ESLDQIIVATPGLSSDPIALGVLQDK Unmodified 2678.4378 0.43782704 3986 Q96S82 UBL7 Ubiquitin-like protein 7 yes yes 0 0 0 By MS/MS 2 0 2 2 99.452 94.739 2;3 1.2441E-133 117167 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 209.25 198.39 150310000 0 150310000 0 0 0 0 0 0 0 0 0 0 0 0 0 14483 3986 13193 121299;121300 96705;96706;96707;96708 96708 4 ESLDQLVQK Unmodified 1058.5608 0.56078914 297 O43149 ZZEF1 Zinc finger ZZ-type and EF-hand domain-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 58.355 52.524 2 0.0073948 67568 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.531 28.499 38974000 0 38974000 0 0 0 0 0 0 0 0 0 0 0 0 0 14484 297 13194 121301 96709 96709 1 ESLDVYELDAK Unmodified 1280.6136 0.61361257 2307 Q13510 ASAH1 Acid ceramidase;Acid ceramidase subunit alpha;Acid ceramidase subunit beta yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 67.043 67.135 2 0.01721 77057 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 85.733 75.502 103620000 0 0 0 26269000 6659600 0 5704800 6690000 5392900 9670900 8444000 17709000 5928200 6783100 4370600 14485 2307 13195 121302;121303;121304;121305;121306;121307;121308;121309;121310;121311;121312 96710;96711;96712;96713 96710 2 ESLESEAELEGLQDAPAGPQVSEE Unmodified 2513.1293 0.12930202 3221 Q8IV38 ANKMY2 Ankyrin repeat and MYND domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS 1 0 2 1 1 102.27 105.35 3 6.7939E-82 94286 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 100.39 93.789 9734900 2759000 6975900 0 0 0 0 0 0 0 0 0 0 0 0 0 14486 3221 13196 121313;121314 96714;96715 96715 2 ESLHEVSK Unmodified 927.46616 0.46616048 346 O43615 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 8.4787 8.6075 2 0.0060377 6093 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 137.9 64.267 93642000 0 0 0 5052300 5668900 4523800 4578400 5420600 3622300 6412100 22080000 11817000 10421000 3156400 10889000 14487 346 13197 121315;121316;121317;121318;121319;121320;121321;121322;121323;121324;121325;121326 96716;96717;96718;96719;96720;96721;96722 96719 6 ESLIDGIK Unmodified 873.48075 0.48074791 1164 P23526 AHCY Adenosylhomocysteinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 55.015 55.145 2 0.035078 61214 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.716 0 215040000 0 0 0 13441000 6427900 6675000 0 11107000 0 0 33422000 22120000 12678000 23012000 86158000 14488 1164 13198 121327;121328;121329;121330;121331;121332;121333;121334;121335 96723;96724 96723 2 ESLLAEQR Unmodified 944.49271 0.49270958 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 31.287 31.566 2 6.3337E-12 33212 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 166.05 99.058 258240000 0 0 0 13078000 0 0 24183000 13846000 18761000 0 32816000 33455000 30110000 32463000 59529000 14489 965 13199 121336;121337;121338;121339;121340;121341;121342;121343;121344 96725;96726;96727;96728;96729;96730;96731;96732 96726 6 ESLLVSHPSVQTK Unmodified 1423.7671 0.76709352 3134 Q86TC9 MYPN Myopalladin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.66 2.95 4 1 24 2 2 1 2 2 2 2 2 2 2 2 2 2 2 2 45.252 44.389 2;3 4.9748E-75 50061 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 199.33 167.57 1254600000 136140000 31752000 96220000 69840000 51230000 62440000 73970000 77390000 63430000 77598000 92192000 110800000 98243000 86573000 126790000 14490 3134 13200 121345;121346;121347;121348;121349;121350;121351;121352;121353;121354;121355;121356;121357;121358;121359;121360;121361;121362;121363;121364;121365;121366;121367;121368;121369;121370;121371;121372;121373 96733;96734;96735;96736;96737;96738;96739;96740;96741;96742;96743;96744;96745;96746;96747;96748;96749;96750;96751;96752;96753;96754;96755;96756;96757;96758;96759;96760;96761;96762;96763;96764;96765;96766;96767;96768 96747 34 ESLMQFSK Unmodified 968.46372 0.46371763 3683 Q92900 UPF1 Regulator of nonsense transcripts 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 51.711 51.81 2 0.033014 58732 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 53.968 27.006 24905000 0 0 0 0 3477900 6858900 0 0 4861700 0 0 0 0 0 9706200 14491 3683 13201 121374;121375;121376;121377 96769 96769 1 ESLMSHAIELK Unmodified 1256.6435 0.64347291 5085 Q9Y263 PLAA Phospholipase A-2-activating protein yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 61.732 61.986 3 0.0084492 71173 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 46.706 35.387 61977000 0 0 0 0 0 7143800 0 2739100 3505000 7109400 7932700 8951000 3323100 5212000 16060000 14492 5085 13202 121378;121379;121380;121381;121382;121383;121384;121385;121386 96770;96771;96772;96773;96774;96775 96775 6 ESLNLEDQIESDESELK Unmodified 1976.9062 0.90622536 4260 Q9BZD4 NUF2 Kinetochore protein Nuf2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 5.4 3.77 2 1 2 1 2 1 1 82.136 78.977 2 3.4206E-57 94824 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 187.44 171.55 173320000 11607000 150450000 0 0 0 0 0 0 0 5137000 0 0 0 0 6125400 14493 4260 13203 121387;121388;121389;121390;121391 96776;96777;96778;96779 96778 4 ESLNVDVVK Unmodified 1001.5393 0.53932542 2143 Q07866 KLC1 Kinesin light chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 50.219 50.242 2 0.013737 56615 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 59.35 33.731 86998000 0 0 0 7794500 8795500 0 11152000 10046000 0 10027000 0 0 0 10906000 28277000 14494 2143 13204 121392;121393;121394;121395;121396;121397;121398;121399;121400 96780;96781;96782;96783;96784;96785;96786;96787 96780 8 ESLNVPQDSDCQNSQSRK Unmodified 2090.9287 0.92870891 2433 Q14686 NCOA6 Nuclear receptor coactivator 6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 27.369 27.636 3 0.0044227 29305 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 30.767 26.414 57016000 0 0 0 0 4762100 0 5377900 6911000 0 6675500 8593600 6722200 0 8848500 9125300 14495 2433 13205 121401;121402;121403;121404;121405;121406;121407;121408 96788;96789;96790;96791;96792;96793;96794 96793 7 ESLPALR Unmodified 784.4443 0.44430282 1630 P50570 DNM2 Dynamin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 44.17 44.342 2 0.023574 49931 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 92.692 25.699 339570000 0 0 0 17781000 19279000 32552000 28416000 24289000 18010000 31264000 23280000 24867000 27453000 27480000 64896000 14496 1630 13206 121409;121410;121411;121412;121413;121414;121415;121416;121417;121418;121419;121420 96795;96796;96797;96798;96799;96800 96799 6 ESLPELSTAQQNK Unmodified 1443.7205 0.72053726 4475 Q9H9Q2 COPS7B COP9 signalosome complex subunit 7b yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.86 3.4 1 1 5 2 1 1 1 1 1 50.694 49.458 2 6.1761E-21 62543 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 166.66 127.4 1485500000 0 47572000 0 0 0 13462000 0 0 0 0 0 229880000 222300000 264550000 707710000 14497 4475 13207 121421;121422;121423;121424;121425;121426;121427 96801;96802;96803;96804;96805;96806 96802 5 ESLQTLMK Unmodified 948.49502 0.49501776 4720 Q9NX70 MED29 Mediator of RNA polymerase II transcription subunit 29 yes yes 0 0 0 By MS/MS 2 0 1 1 58.757 52.914 2 0.031365 68356 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.109 32.635 54124000 0 54124000 0 0 0 0 0 0 0 0 0 0 0 0 0 14498 4720 13208 121428 96807;96808 96808 2 ESLQTLMK Oxidation (M) 964.48993 0.48993238 4720 Q9NX70 MED29 Mediator of RNA polymerase II transcription subunit 29 yes yes 0 1 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 29.621 29.907 2 0.037139 31230 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 44.767 28.219 26104000 0 0 0 0 2464100 2585200 0 1123800 0 0 3254000 4926900 4297300 2456100 4996700 14499 4720 13208 121429;121430;121431;121432;121433;121434;121435;121436 96809 96809 1 ESLREVQLEELEAARDLVSK Unmodified 2313.2176 0.21760393 1658 P51570 GALK1 Galactokinase yes yes 0 0 2 By MS/MS 2 0 2 2 90.805 82.675 3;4 2.8701E-47 107373 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.5 66.189 113040000 113040000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14500 1658 13209 121437;121438 96810;96811;96812 96811 3 ESLSAATAQAAER Unmodified 1303.6368 0.63680763 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.563 37.743 2 1.2399E-12 41263 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 137.89 113.04 327440000 0 0 0 19317000 20514000 24098000 26376000 32088000 16451000 32536000 27286000 44092000 32248000 23734000 28702000 14501 3023 13210 121439;121440;121441;121442;121443;121444;121445;121446;121447;121448;121449;121450 96813;96814;96815;96816;96817;96818;96819;96820;96821;96822;96823 96821 11 ESLSAATAQAAERAATSVK Unmodified 1860.9541 0.95411902 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 76.963 73.195 3 0.00013905 91528 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.739 45.039 47445000 0 35219000 12225000 0 0 0 0 0 0 0 0 0 0 0 0 14502 3023 13211 121451;121452 96824;96825 96824 2 ESLSEEEAQK Unmodified 1148.5197 0.51971219 4230 Q9BXP5 SRRT Serrate RNA effector molecule homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 19 1 1 1 1 2 2 2 2 2 2 2 1 16.105 16.324 2 2.3983E-11 15828 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 160.88 106.72 442810000 0 0 0 13939000 11407000 15491000 23227000 24848000 29834000 35458000 52019000 71259000 49723000 62391000 53217000 14503 4230 13212 121453;121454;121455;121456;121457;121458;121459;121460;121461;121462;121463;121464;121465;121466;121467;121468;121469;121470;121471 96826;96827;96828;96829;96830;96831;96832;96833;96834;96835;96836 96833 11 ESLSRMGSDLK Unmodified 1221.6023 0.60233638 5301 Q9Y6Y8 SEC23IP SEC23-interacting protein yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 41.299 35.405 3 0.0078797 46280 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 51.841 33.169 37398000 7405500 29992000 0 0 0 0 0 0 0 0 0 0 0 0 0 14504 5301 13213 121472;121473 96837 96837 1 ESLSTAAECVK Unmodified 1193.5598 0.55980286 3284 Q8IYI6 EXOC8 Exocyst complex component 8 yes yes 0 0 0 By MS/MS 2 0 1 1 40.632 35.58 2 0.009304 46265 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.414 47.417 43608000 0 43608000 0 0 0 0 0 0 0 0 0 0 0 0 0 14505 3284 13214 121474 96838 96838 1 ESLSTSSDLYK Unmodified 1228.5823 0.58231245 3479 Q8TB72 PUM2 Pumilio homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 40.879 41.337 2 0.016762 46134 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 44.203 12.269 42581000 0 0 0 0 0 0 0 0 0 7510400 6875900 7532500 7913700 6538600 6209300 14506 3479 13215 121475;121476;121477;121478;121479;121480 96839 96839 1 ESLTDPSK Unmodified 875.42363 0.42362696 2717 Q58FG1 HSP90AA4P Putative heat shock protein HSP 90-alpha A4 yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 17.842 14.054 2 0.0215 20100 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.568 32.781 64827000 45364000 0 19463000 0 0 0 0 0 0 0 0 0 0 0 0 14507 2717 13216 121481;121482;121483 96840;96841;96842;96843;96844 96840 5 ESLTEDASK Unmodified 978.45057 0.45056999 4236 Q9BXW9 FANCD2 Fanconi anemia group D2 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 14.036 14.261 2 0.018261 12763 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 54.982 40.206 30263000 0 0 0 2299200 0 0 2592100 2132900 2398700 0 5015800 5102800 0 3397600 7323700 14508 4236 13217 121484;121485;121486;121487;121488;121489;121490;121491 96845;96846 96846 2 ESLTEEDVLNCQK Unmodified 1563.7087 0.70865195 4672 Q9NVM9 ASUN Protein asunder homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 54.301 54.434 2 1.0258E-13 61425 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 142.43 127.45 83223000 0 0 0 6169500 5592500 7527600 8868200 5321800 7858600 0 8341600 8349600 7400700 7566600 10227000 14509 4672 13218 121492;121493;121494;121495;121496;121497;121498;121499;121500;121501;121502;121503 96847;96848;96849;96850;96851;96852;96853;96854;96855;96856;96857;96858;96859 96851 13 ESLTGPPYL Unmodified 975.49131 0.49131259 4105 Q9BRA0 NAA38 N-alpha-acetyltransferase 38, NatC auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 77.782 77.944 2 0.0076184 90042 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 71.949 57.792 58480000 0 0 0 0 0 0 0 0 0 15763000 18297000 24420000 0 0 0 14510 4105 13219 121504;121505;121506 96860;96861;96862 96860 3 ESLTLLRK Unmodified 958.58113 0.58113065 3761 Q96BN8 OTULIN Ubiquitin thioesterase otulin yes yes 0 0 1 By MS/MS 2 0 1 1 50.905 42.995 2 0.023062 59504 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 143.56 52.85 68092000 68092000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14511 3761 13220 121507 96863 96863 0 ESLTPGREENPSSVLAQER Unmodified 2098.0291 0.029074882 775 P04150 NR3C1 Glucocorticoid receptor yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 56.963 57.156 3 3.678E-07 64126 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 77.506 71.525 113770000 0 0 0 0 8623300 8735300 8340500 9504600 8607100 8089300 13140000 13481000 11048000 11028000 13170000 14512 775 13221 121508;121509;121510;121511;121512;121513;121514;121515;121516;121517;121518 96864;96865;96866;96867;96868;96869;96870;96871;96872;96873;96874 96871 10 ESLVLQVSVLTDQVEAQGEK Unmodified 2171.1321 0.13214297 3180 Q86W92 PPFIBP1 Liprin-beta-1 yes yes 0 0 0 By MS/MS 2 0 1 1 95.71 87.579 3 8.6775E-30 113236 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.609 71.36 7832100 7832100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14513 3180 13222 121519 96875 96875 1 ESLVVNYEDLAAR Unmodified 1477.7413 0.7412727 1590 P49736 MCM2 DNA replication licensing factor MCM2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 77.075 77.23 2 2.6428E-13 88687 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 138.71 121.28 159420000 0 0 0 0 0 12746000 9710900 9539200 6256200 17902000 20444000 28157000 12544000 0 42116000 14514 1590 13223 121520;121521;121522;121523;121524;121525;121526;121527;121528;121529;121530 96876;96877;96878;96879;96880;96881;96882;96883;96884;96885;96886;96887 96880 12 ESLWPFLIDK Unmodified 1246.6598 0.6597749 4772 Q9NZL9 MAT2B Methionine adenosyltransferase 2 subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 97.228 92.564 2 7.3782E-06 115978 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 129.38 113.42 203810000 35161000 159490000 9158000 0 0 0 0 0 0 0 0 0 0 0 0 14515 4772 13224 121531;121532;121533;121534 96888;96889;96890;96891 96890 4 ESLYWLTDADKK Unmodified 1467.7246 0.72456001 178 O00750 PIK3C2B Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit beta yes yes 0 0 1 By MS/MS 2 0 1 1 74.656 71.808 3 0.034628 87627 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 27.137 20.439 1145300 0 0 1145300 0 0 0 0 0 0 0 0 0 0 0 0 14516 178 13225 121535 96892 96892 1 ESMAGNKPANAVLHK Unmodified 1565.7984 0.79841043 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 25.801 25.442 3 9.3326E-16 38580 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.942 79.743 183540000 90690000 0 0 6068100 7796800 0 10282000 7825500 3156400 9583100 13355000 9898700 0 7818900 17068000 14517 2451 13226 121536;121537;121538;121539;121540;121541;121542;121543;121544;121545;121546 96893;96894;96895 96894 3 ESMAGNKPANAVLHK Oxidation (M) 1581.7933 0.79332505 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 15.545 15.703 3 0.00043273 15058 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.434 41.084 60612000 0 0 0 7071700 3404200 2772300 0 8250200 0 0 9746200 12314000 9634400 7419500 0 14518 2451 13226 121547;121548;121549;121550;121551;121552;121553;121554 96896;96897;96898;96899 96899 4020 4 ESMATGSIPITVR Unmodified 1360.7021 0.70205043 1590 P49736 MCM2 DNA replication licensing factor MCM2 yes yes 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 68.64 68.784 2 0.00082763 79064 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 69.721 48.257 129220000 0 0 0 0 5485200 10476000 7712500 9187800 0 10622000 17803000 10373000 7128500 13005000 37425000 14519 1590 13227 121555;121556;121557;121558;121559;121560;121561;121562;121563;121564 96900;96901;96902 96900 3 ESMATGSIPITVR Oxidation (M) 1376.697 0.69696505 1590 P49736 MCM2 DNA replication licensing factor MCM2 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 57.443 57.822 2 0.0044753 64982 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 46.73 30.19 46349000 0 0 0 0 0 0 0 0 0 0 0 27568000 0 18781000 0 14520 1590 13227 121565;121566;121567;121568 96903;96904;96905 96905 2559 3 ESMCSTPAFPVSPETPYVK Unmodified 2125.97 0.97002836 2854 Q68CZ2 TNS3 Tensin-3 yes yes 0 0 0 By MS/MS 2 0 1 1 83.759 79.038 2 2.7604E-05 98391 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.551 88.709 72196000 0 72196000 0 0 0 0 0 0 0 0 0 0 0 0 0 14521 2854 13228 121569 96906 96906 1 ESMCSTPAFPVSPETPYVK Oxidation (M) 2141.9649 0.96494299 2854 Q68CZ2 TNS3 Tensin-3 yes yes 0 1 0 By matching By matching By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 77.373 77.407 2 5.2455E-05 88613 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 61.375 53.464 25179000 0 0 0 1792900 0 0 0 4027000 0 5442700 0 4738800 4569700 4607800 0 14522 2854 13228 121570;121571;121572;121573;121574;121575 96907;96908 96907 4510 2 ESMLVEWEQVK Unmodified 1376.6646 0.66460229 3311 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 79.556 79.69 2 0.0029447 91864 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.733 71.526 21094000 0 0 0 0 0 3076900 1324700 3474500 0 2550900 0 0 0 2291600 8375300 14523 3311 13229 121576;121577;121578;121579;121580;121581;121582 96909;96910;96911 96909 3 ESMSEADRAQK Oxidation (M) 1266.551 0.55102909 4469 Q9H9B1 EHMT1 Histone-lysine N-methyltransferase EHMT1 yes yes 0 1 1 By MS/MS 2.5 0.5 1 1 2 5.5392 2.2384 3 0.00046896 3610 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 91.937 77.244 40835000 0 40835000 0 0 0 0 0 0 0 0 0 0 0 0 0 14524 4469 13230 121583;121584 96912 96912 5908 1 ESMTDAILQTDQTLTEK Unmodified 1922.9143 0.91428762 1321 P32455 GBP1 Interferon-induced guanylate-binding protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 86.17 81.396 2 3.4095E-35 101200 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 164.11 116.22 18636000 0 18636000 0 0 0 0 0 0 0 0 0 0 0 0 0 14525 1321 13231 121585 96913 96913 1 ESNARIVK Unmodified 915.51378 0.51377937 3560 Q8WVC0 LEO1 RNA polymerase-associated protein LEO1 yes yes 0 0 1 By MS/MS 2 0 1 1 9.3791 5.7404 2 0.030621 9459 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 109.01 50.031 63611000 63611000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14526 3560 13232 121586 96914 96914 0 ESNEEEQVWHFLGK Unmodified 1730.79 0.79001381 4374 Q9H2U2 PPA2 Inorganic pyrophosphatase 2, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 85.914 80.786 3 0.002282 101827 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.32 53.971 53186000 16206000 35040000 1939400 0 0 0 0 0 0 0 0 0 0 0 0 14527 4374 13233 121587;121588;121589 96915;96916 96915 2 ESNLDRLNEQGNFK Unmodified 1662.7962 0.79616182 3111 Q7Z6E9 RBBP6 E3 ubiquitin-protein ligase RBBP6 yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 43.494 43.994 3 0.0029367 48188 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.825 32.407 27076000 0 0 0 0 0 0 0 0 0 0 0 0 0 8109100 18967000 14528 3111 13234 121590;121591 96917 96917 1 ESNLETELK Unmodified 1061.5241 0.52406928 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 37.207 37.447 2 0.0036563 41363 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 89.355 44.273 86890000 0 0 0 0 4357700 8419600 6376700 6080400 6362900 7278800 9210900 12136000 8292100 6235100 12140000 14529 2291 13235 121592;121593;121594;121595;121596;121597;121598;121599;121600;121601;121602 96918;96919;96920;96921;96922;96923;96924;96925;96926;96927 96921 10 ESNMSTLLER Unmodified 1178.5601 0.56013721 413 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 54.996 55.149 2 0.013426 61541 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 51.268 36.732 56387000 0 0 0 0 3294700 4675200 4133800 4454800 4897300 8181500 5975200 0 0 5979800 14795000 14530 413 13236 121603;121604;121605;121606;121607;121608;121609;121610;121611 96928;96929;96930;96931 96931 4 ESNSLEISLIK Unmodified 1231.666 0.66598249 3975 Q96RS6 NUDCD1 NudC domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 2 1 1 1 76.466 75.239 2 0.0025413 93648 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.817 44.75 773410000 36580000 639340000 8459900 0 0 7651600 5269800 5044400 0 8792600 11236000 15020000 5191100 8488900 22336000 14531 3975 13237 121612;121613;121614;121615;121616;121617;121618;121619;121620;121621;121622;121623;121624;121625 96932;96933;96934;96935;96936;96937;96938;96939;96940;96941 96934 10 ESNTDQGFFK Unmodified 1171.5146 0.51456723 4507 Q9HC52 CBX8 Chromobox protein homolog 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 40.927 40.855 2 0.009388 45473 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 57.859 41.319 18350000 0 0 0 4941600 0 0 0 7542400 5865800 0 0 0 0 0 0 14532 4507 13238 121626;121627;121628;121629;121630;121631 96942;96943;96944;96945 96945 4 ESNVQEVR Unmodified 959.46722 0.46722311 1954;1906 P67775;P62714 PPP2CA;PPP2CB Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform;Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform no no 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 10.029 10.074 2 0.01701 8775 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 66.351 33.996 29672000 0 0 0 0 4745800 7752800 6077200 0 3018800 0 0 0 0 8077000 0 14533 1954;1906 13239 121632;121633;121634;121635;121636;121637 96946;96947;96948 96946 3 ESPEGSYTDDANQEVR Unmodified 1795.7497 0.74966514 2766 Q5T0N5 FNBP1L Formin-binding protein 1-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 34.719 34.874 2 3.1132E-10 37481 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 92.925 85.358 30159000 0 0 0 1631900 1615400 0 2050400 2168200 3078500 0 0 5139400 0 3940900 10534000 14534 2766 13240 121638;121639;121640;121641;121642;121643;121644;121645;121646 96949;96950;96951;96952;96953;96954 96949 6 ESPESEGPIYEGLIL Unmodified 1631.793 0.7930335 3961 Q96QK1 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 94.059 94.134 2 1.5071E-14 109151 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 102.55 92.442 75911000 0 0 0 940940 3276500 4319100 3301400 3369900 2280700 6632600 8504700 9738800 3469200 6891900 23185000 14535 3961 13241 121647;121648;121649;121650;121651;121652;121653;121654;121655;121656;121657;121658 96955;96956;96957 96955 3 ESPGAAATSSSGPQAQQHR Unmodified 1865.8616 0.86161562 3047 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.123 14.286 3 3.0929E-49 13054 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.57 98.57 446550000 0 0 0 24644000 32644000 29718000 20264000 21753000 21127000 52112000 46428000 45612000 48112000 49409000 54722000 14536 3047 13242 121659;121660;121661;121662;121663;121664;121665;121666;121667;121668;121669;121670 96958;96959;96960;96961;96962;96963;96964;96965;96966;96967;96968 96961 11 ESPGSSEFFQEAVSHGK Unmodified 1821.817 0.81695684 3303 Q8N108 MIER1 Mesoderm induction early response protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 71.019 66.406 3 0.00032956 81267 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 47.64 37.982 26250000 0 20841000 5409100 0 0 0 0 0 0 0 0 0 0 0 0 14537 3303 13243 121671;121672 96969;96970 96970 1 ESPGSSEFFQEAVSHGKFEELENTDD Unmodified 2914.2417 0.24170601 3303 Q8N108 MIER1 Mesoderm induction early response protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 87.31 79.18 3 0.018007 103088 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 23.913 17.408 13342000 13342000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14538 3303 13244 121673 96971 96971 1 ESPHEPDPEPYEPIPPK Unmodified 1956.9105 0.91052288 3955 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 2 1 1 1 1 1 55.706 54.806 3 2.6564E-07 70295 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.993 93.025 269630000 0 73329000 0 22916000 0 0 28685000 0 31311000 0 26305000 30921000 24418000 0 31744000 14539 3955 13245 121674;121675;121676;121677;121678;121679;121680;121681;121682;121683;121684;121685 96972;96973;96974;96975;96976;96977;96978;96979;96980;96981;96982;96983;96984;96985;96986;96987;96988;96989;96990 96975 19 ESPLLNDYR Unmodified 1105.5404 0.54038805 33 A6ZKI3 FAM127A Protein FAM127A no no 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 49.29 49.561 2 0.023114 55075 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 51.193 34.99 56598000 0 0 0 0 0 0 0 0 0 0 0 0 37228000 19370000 0 14540 33 13246 121686;121687 96991 96991 1 ESPLQFSLNGGSEK Unmodified 1491.7205 0.72053726 3520 Q8TEU7 RAPGEF6 Rap guanine nucleotide exchange factor 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.76 71.803 2 0.00036066 82560 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 82.171 56.232 34007000 0 0 0 2442300 2041900 3160400 2845000 2213200 2407400 4819500 3643600 0 3363900 2542600 4527000 14541 3520 13247 121688;121689;121690;121691;121692;121693;121694;121695;121696;121697;121698;121699 96992;96993;96994;96995;96996;96997;96998;96999;97000 96996 9 ESPQDSAITR Unmodified 1102.5255 0.52546627 5171 Q9Y3P9 RABGAP1 Rab GTPase-activating protein 1 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 19.081 19.209 2 0.0060165 19487 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 66.621 49.236 44818000 0 0 0 0 3856300 8152700 5376500 3770500 0 0 0 0 0 9024000 14638000 14542 5171 13248 121700;121701;121702;121703;121704;121705 97001;97002 97002 1 ESPQEIARK Unmodified 1056.5564 0.55637247 2045 Q00796 SORD Sorbitol dehydrogenase yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 15.147 12.324 2 0.014894 16027 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.5 55.253 108750000 0 94078000 14673000 0 0 0 0 0 0 0 0 0 0 0 0 14543 2045 13249 121706;121707 97003 97003 1 ESPSAAGPEDK Unmodified 1086.4829 0.48293275 2667 Q3KQU3 MAP7D1 MAP7 domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 9.0063 9.2678 2 0.027446 7547 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 39.848 23.375 12279000 0 0 0 0 0 0 0 0 0 1580000 0 6329300 0 0 4369900 14544 2667 13250 121708;121709;121710 97004 97004 1 ESPVCTSGWYHLAEAQVK Unmodified 2060.9626 0.96257522 2947 Q6PGP7 TTC37 Tetratricopeptide repeat protein 37 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 81.462 77.952 3 0.00088434 94544 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 52.172 43.353 31596000 0 25723000 5873300 0 0 0 0 0 0 0 0 0 0 0 0 14545 2947 13251 121711;121712;121713 97005;97006;97007 97007 3 ESPVEFTGHK Unmodified 1129.5404 0.54038805 2764 Q5SY16 NOL9 Polynucleotide 5'-hydroxyl-kinase NOL9 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 34.13 29.551 2 0.010237 38528 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.92 58.38 24087000 0 24087000 0 0 0 0 0 0 0 0 0 0 0 0 0 14546 2764 13252 121714;121715 97008 97008 1 ESPVSAGNDAYVDLDR Unmodified 1706.7748 0.77475768 3174 Q86VS8 HOOK3 Protein Hook homolog 3 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 61.96 62.054 2 2.75E-08 70302 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.731 75.855 27452000 0 0 0 1868200 2503600 0 0 3943500 3075600 0 4182500 4491300 0 2651300 4736300 14547 3174 13253 121716;121717;121718;121719;121720;121721;121722;121723;121724;121725 97009;97010;97011;97012;97013;97014 97011 6 ESPVSAPLEGLICR Unmodified 1526.7763 0.776278 488 O75376 NCOR1 Nuclear receptor corepressor 1 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 83.899 83.789 2 0.0060353 96856 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 38.634 28.53 4898800 0 0 0 1527000 0 0 3371800 0 0 0 0 0 0 0 0 14548 488 13254 121726;121727 97015 97015 1 ESQATLEER Unmodified 1061.4989 0.49891717 405 O60502 MGEA5 Protein O-GlcNAcase yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 15.013 15.34 2 0.0086707 14016 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 68.95 33.8 14982000 0 0 0 0 0 0 0 0 0 1728800 3859100 3473400 1615300 4305200 0 14549 405 13255 121728;121729;121730;121731;121732 97016 97016 1 ESQEMDARPK Unmodified 1189.5397 0.53973612 3406 Q8NC96 NECAP1 Adaptin ear-binding coat-associated protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 10.98 7.7148 2 0.014566 10689 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.4 85.693 9963500 0 9963500 0 0 0 0 0 0 0 0 0 0 0 0 0 14550 3406 13256 121733 97017 97017 1 ESQFTLSK Unmodified 938.47091 0.4709115 2353 Q13889 GTF2H3 General transcription factor IIH subunit 3 yes yes 0 0 0 By MS/MS 2 0 1 1 38.58 33.613 2 0.038018 43883 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.501 44.247 41126000 0 41126000 0 0 0 0 0 0 0 0 0 0 0 0 0 14551 2353 13257 121734 97018 97018 1 ESQHIPTAEGASGSNTEEEIR Unmodified 2241.0145 0.01454703 2839 Q63ZY3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.195 40.374 3 1.6784E-53 43975 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 120.23 102.53 141470000 0 0 0 9174800 6057000 14634000 8688500 7394300 7939700 8983900 14972000 12383000 12469000 16027000 22744000 14552 2839 13258 121735;121736;121737;121738;121739;121740;121741;121742;121743;121744;121745;121746 97019;97020;97021;97022;97023;97024;97025;97026;97027;97028;97029;97030;97031;97032;97033;97034;97035;97036 97024 18 ESQISAEIELLPTNDK Unmodified 1785.8996 0.89962384 3786 Q96CW1 AP2M1 AP-2 complex subunit mu yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.5 0.5 2 2 2 1 1 83.767 79.39 2 5.8408E-05 95911 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 115.34 92.463 67515000 50893000 13773000 2848800 0 0 0 0 0 0 0 0 0 0 0 0 14553 3786 13259 121747;121748;121749;121750 97037;97038;97039 97037 3 ESQLAHIK Unmodified 924.50288 0.50288033 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 16.816 17.004 2 0.015415 17539 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 68.915 49.068 66546000 0 0 0 3367800 0 8435100 5503000 0 6213500 6194200 10511000 0 6481700 7191600 12649000 14554 3119 13260 121751;121752;121753;121754;121755;121756;121757;121758;121759 97040;97041 97040 2 ESQLFDPSDLQDTSNR Unmodified 1850.8282 0.82824981 5054 Q9UPQ0 LIMCH1 LIM and calponin homology domains-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.15 72.219 2 8.7399E-21 83190 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 128.31 110.5 75430000 0 0 0 3462500 4555300 6907400 5673600 5308500 3932900 7560700 7519800 10145000 5379900 6036300 8948000 14555 5054 13261 121760;121761;121762;121763;121764;121765;121766;121767;121768;121769;121770;121771 97042;97043;97044;97045;97046;97047;97048;97049;97050;97051;97052;97053 97051 12 ESQLFDPSDLQDTSNRVTVK Unmodified 2278.1077 0.10771913 5054 Q9UPQ0 LIMCH1 LIM and calponin homology domains-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75.692 74.918 3 4.2702E-37 86370 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.45 93.143 373070000 17426000 9097300 0 8902400 16216000 27705000 22419000 29883000 26603000 37151000 33836000 39003000 24314000 26005000 54513000 14556 5054 13262 121772;121773;121774;121775;121776;121777;121778;121779;121780;121781;121782;121783;121784;121785 97054;97055;97056;97057;97058;97059;97060;97061;97062;97063;97064;97065;97066;97067;97068 97058 15 ESQLLPDGER Unmodified 1142.5568 0.5567664 2958 Q6PJG2 ELMSAN1 ELM2 and SANT domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 38.773 39.033 2 0.013776 43632 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.066 40.987 57821000 0 0 0 0 3730200 4562800 0 3844400 3083000 6067700 9252600 6821900 5127500 4035000 11296000 14557 2958 13263 121786;121787;121788;121789;121790;121791;121792;121793;121794;121795 97069;97070;97071 97069 3 ESQQQHGLR Unmodified 1081.5265 0.52646932 4895 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 5.6549 5.7691 2 0.036366 3459 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 45.718 25.093 19946000 0 0 0 2292500 1450900 2446700 2662500 3218700 2556800 2121300 937650 0 0 883100 1376000 14558 4895 13264 121796;121797;121798;121799;121800;121801;121802;121803;121804;121805 97072 97072 1 ESQQSNFGTGEQK Unmodified 1438.6325 0.63245054 4894 Q9UHB7 AFF4 AF4/FMR2 family member 4 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.493 14.655 2 0.0011281 14058 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.73 59.765 48488000 0 0 0 3685600 3954800 2728900 2741300 3048000 3764300 5214300 5633600 3945400 4576900 3023300 6171400 14559 4894 13265 121806;121807;121808;121809;121810;121811;121812;121813;121814;121815;121816;121817 97073;97074;97075;97076;97077;97078;97079;97080;97081 97079 8 ESQRERDSAEGGEGNTGPK Unmodified 2002.894 0.89403796 2594 Q15911 ZFHX3 Zinc finger homeobox protein 3 yes yes 0 0 2 By MS/MS 2 0 1 1 6.3199 4.1024 3 0.0050757 5883 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 51.819 43.34 7118600 0 0 7118600 0 0 0 0 0 0 0 0 0 0 0 0 14560 2594 13266 121818 97082 97082 1 ESQRSGNVAELALK Unmodified 1500.7896 0.78961988 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.5 0.5 2 2 1 2 1 50.688 45.688 3 2.3084E-14 60192 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.72 99.371 1289800000 1198900 442490000 846150000 0 0 0 0 0 0 0 0 0 0 0 0 14561 1564 13267 121819;121820;121821;121822 97083;97084;97085;97086 97084 4 ESQSHPGDFVLSVR Unmodified 1556.7583 0.75831975 2122 Q06124 PTPN11 Tyrosine-protein phosphatase non-receptor type 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.739 60.844 3 0.021723 69336 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 25.866 21.065 85154000 0 0 0 4346800 3375600 5667500 5863200 7352300 4396700 8145800 8509300 10482000 6416300 7039100 13559000 14562 2122 13268 121823;121824;121825;121826;121827;121828;121829;121830;121831;121832;121833;121834 97087;97088 97087 2 ESQSPDTTIQR Unmodified 1260.5946 0.59460847 3692 Q92973 TNPO1 Transportin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.25 2.49 1 11 1 1 1 1 1 1 1 1 1 1 1 1 26.604 27.189 2 1.4114E-05 19966 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 138.66 105.82 1066200000 13284000 0 0 68921000 53901000 104570000 80527000 69967000 56866000 157010000 102100000 0 105630000 96239000 157190000 14563 3692 13269 121835;121836;121837;121838;121839;121840;121841;121842;121843;121844;121845;121846 97089;97090;97091;97092;97093;97094;97095;97096;97097;97098;97099;97100 97099 12 ESQSPDTTIQRTVQQK Unmodified 1844.9228 0.9228189 3692 Q92973 TNPO1 Transportin-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 40.114 35.142 3 9.358E-39 45957 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.81 120.15 512150000 38442000 460670000 13038000 0 0 0 0 0 0 0 0 0 0 0 0 14564 3692 13270 121847;121848;121849;121850 97101;97102;97103;97104;97105;97106;97107 97102 7 ESQSVEEALK Unmodified 1118.5455 0.54553301 1612 P49915 GMPS GMP synthase [glutamine-hydrolyzing] yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 31.787 32.077 2 0.014518 35307 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 65.305 41.102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14565 1612 13271 121851;121852;121853 97108;97109;97110 97108 3 ESQTQDNITVR Unmodified 1289.6212 0.62115757 3683 Q92900 UPF1 Regulator of nonsense transcripts 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.942 24.152 2 1.6402E-05 24307 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 134.25 103.99 197690000 0 0 0 11936000 9082400 15575000 13807000 13186000 10638000 0 13548000 23230000 22564000 20957000 43166000 14566 3683 13272 121854;121855;121856;121857;121858;121859;121860;121861;121862;121863;121864;121865 97111;97112;97113;97114;97115;97116 97114 6 ESQVVSENGQEK Unmodified 1332.6157 0.61573784 4814 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 11.357 11.504 2 0.00013039 10718 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 86.898 68.458 62327000 0 0 0 2911100 3411300 4062900 3630500 5115600 4680300 4766000 4865100 8488900 8168600 5649800 6577400 14567 4814 13273 121866;121867;121868;121869;121870;121871;121872;121873;121874;121875;121876;121877 97117;97118;97119;97120;97121;97122;97123;97124;97125;97126;97127;97128;97129;97130 97120 11 ESREAVEK Unmodified 946.47197 0.47197413 1002 P14625 HSP90B1 Endoplasmin yes yes 0 0 1 By MS/MS By MS/MS 2.25 0.433 3 1 1 3 3.5675 0.25448 2 0.026922 4372 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 128.38 35.121 426940000 45837000 381100000 0 0 0 0 0 0 0 0 0 0 0 0 0 14568 1002 13274 121878;121879;121880;121881 97131;97132;97133 97132 3 ESRLESSGK Unmodified 991.49344 0.49343786 4653 Q9NUQ8 ABCF3 ATP-binding cassette sub-family F member 3 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 4.1501 1.2321 2 0.0027793 3597 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 124.92 72.519 94532000 0 83025000 11507000 0 0 0 0 0 0 0 0 0 0 0 0 14569 4653 13275 121882;121883;121884 97134;97135;97136 97135 2 ESRLLNQEK Unmodified 1115.5935 0.59348625 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 1 By MS/MS 2 0 1 1 19.426 14.841 2 0.010128 21861 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 134.23 38.486 326530000 326530000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14570 3676 13276 121885 97137 97137 1 ESRLQDLLETK Unmodified 1330.7092 0.70924429 3489 Q8TCG1 KIAA1524 Protein CIP2A yes yes 0 0 1 By MS/MS 2 0 1 1 76.49 68.36 2 0.032211 90132 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.184 17.156 11156000 11156000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14571 3489 13277 121886 97138 97138 1 ESRPAEVPAEGLVNGAGAPGGGGVR Unmodified 2303.1618 0.16182039 3321 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 yes yes 0 0 1 By MS/MS 10 0 1 1 61.598 61.961 3 0.014546 70720 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 36.9 28.54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14572 3321 13278 121887 97139 97139 1 ESRPENEEERPK Unmodified 1498.7012 0.7011988 534 O75695 RP2 Protein XRP2 yes yes 0 0 2 By MS/MS 2 0 1 1 6.4567 4.2391 3 0.00010005 6053 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 84.169 74.974 4320100 0 0 4320100 0 0 0 0 0 0 0 0 0 0 0 0 14573 534 13279 121888 97140 97140 1 ESRPGLVTVTSSQSTPAK Unmodified 1843.964 0.96395543 4769 Q9NZJ0 DTL Denticleless protein homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40.928 40.261 3 5.1268E-11 44718 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 86.8 75.945 381040000 35839000 0 17281000 17874000 19626000 27864000 27480000 22797000 20616000 36644000 32946000 38239000 21187000 20902000 41750000 14574 4769 13280 121889;121890;121891;121892;121893;121894;121895;121896;121897;121898;121899;121900;121901;121902 97141;97142;97143;97144;97145;97146;97147;97148;97149;97150;97151;97152;97153 97147 13 ESRPPDFISISASK Unmodified 1532.7835 0.78347187 3598 Q8WY36 BBX HMG box transcription factor BBX yes yes 0 0 1 By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 62.854 62.931 3 0.00030651 72232 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 57.136 48.959 122910000 0 0 0 8595400 6404400 11026000 11480000 8770700 9203800 16670000 13095000 19373000 0 0 18294000 14575 3598 13281 121903;121904;121905;121906;121907;121908;121909;121910;121911;121912 97154;97155;97156;97157;97158;97159;97160;97161 97161 5 ESRQEEMNSQQEEEEMETDAR Oxidation (M) 2600.0239 0.023867442 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 1 1 2 2 2 2 2 2 2 2 27.688 27.902 3 2.8357E-238 33368 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 230.06 223.47 275920000 0 0 0 24180000 19073000 13606000 16491000 17358000 21412000 31491000 24141000 37290000 26456000 23505000 20920000 14576 2290 13282 121913;121914;121915;121916;121917;121918;121919;121920;121921;121922;121923;121924;121925;121926;121927;121928;121929;121930;121931;121932;121933;121934 97162;97163;97164;97165;97166;97167;97168;97169;97170;97171;97172;97173;97174;97175;97176;97177;97178;97179;97180;97181;97182;97183;97184;97185;97186;97187 97183 3733;3734 26 ESRQEEMNSQQEEEEMETDAR Unmodified 2584.029 0.02895282 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.539 38.719 3 4.0493E-110 43033 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 183.06 183.06 392180000 0 0 0 16423000 19330000 23177000 26544000 28561000 25632000 30085000 37047000 67150000 27252000 24343000 66640000 14577 2290 13282 121935;121936;121937;121938;121939;121940;121941;121942;121943;121944;121945;121946 97188;97189;97190;97191;97192;97193;97194;97195;97196;97197;97198;97199;97200;97201;97202;97203 97189 16 ESRQEEMNSQQEEEEMETDAR 2 Oxidation (M) 2616.0188 0.018782064 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 2 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 15.748 16.009 3 3.2524E-59 15684 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 129.02 128.56 151060000 0 0 0 4892400 0 0 0 5874600 9741800 10415000 14287000 68136000 14781000 9656100 13279000 14578 2290 13282 121947;121948;121949;121950;121951;121952;121953;121954;121955 97204;97205;97206;97207;97208;97209;97210;97211;97212;97213;97214;97215 97212 3733;3734 12 ESRQEEMNSQQEEEEMETDARSSLGQSASETEEDTVSVSK Oxidation (M) 4521.8991 0.89912702 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 1 2 By MS/MS 2 0 1 1 73.986 65.856 4 1.5538E-10 87116 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.951 40.415 18848000 18848000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14579 2290 13283 121956 97216;97217 97216 3733;3734 2 ESRQEEMNSQQEEEEMETDARSSLGQSASETEEDTVSVSK Unmodified 4505.9042 0.9042124 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 74.9 69.359 4 3.8978E-45 89452 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.542 77.442 27344000 18231000 0 9113200 0 0 0 0 0 0 0 0 0 0 0 0 14580 2290 13283 121957;121958 97218;97219;97220 97219 3 ESRYEEEEEQSR Unmodified 1569.6543 0.65430819 5231 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.42 12.571 3 0.0044858 11382 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 35.608 31.545 24223000 0 0 0 1887400 1975500 1580300 1519600 1432100 813050 2018200 2178400 4098800 2407400 2045000 2267700 14581 5231 13284 121959;121960;121961;121962;121963;121964;121965;121966;121967;121968;121969;121970 97221;97222 97222 2 ESSANNSVSPSESLR Unmodified 1562.7172 0.7172428 2104 Q04726 TLE3 Transducin-like enhancer protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.304 30.493 2 4.3208E-14 32641 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 98.353 83.088 169370000 0 0 0 7244300 7222000 9638400 9518000 14362000 8022800 14166000 17296000 20346000 15446000 16689000 29421000 14582 2104 13285 121971;121972;121973;121974;121975;121976;121977;121978;121979;121980;121981;121982 97223;97224;97225;97226;97227;97228;97229;97230;97231;97232;97233;97234 97228 12 ESSATDEAWR Unmodified 1150.4891 0.48908076 2184 Q12769 NUP160 Nuclear pore complex protein Nup160 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 26.139 26.435 2 0.011338 28573 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 54.416 38.875 12645000 0 0 0 0 0 3097100 0 0 0 3021100 0 0 2822400 0 3704100 14583 2184 13286 121983;121984;121985;121986;121987 97235;97236;97237;97238;97239 97235 5 ESSDQTGINISGFENK Unmodified 1724.7853 0.78532236 584 O94782 USP1 Ubiquitin carboxyl-terminal hydrolase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 65.335 64.868 2 2.4272E-23 80703 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.21 108.67 69258000 0 24586000 0 2557300 2194900 4012000 3519800 4283900 0 3825900 5627800 7241300 0 4286600 7122100 14584 584 13287 121988;121989;121990;121991;121992;121993;121994;121995;121996;121997;121998 97240;97241;97242;97243;97244;97245;97246;97247;97248;97249;97250 97243 11 ESSEASELILYSLEAEVTVTGTDSQYCRK Unmodified 3264.5344 0.53438256 321 O43379 WDR62 WD repeat-containing protein 62 yes yes 0 0 1 By MS/MS 3 0 1 1 97.984 94.472 3 0.00086236 97985 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 32.164 30.053 2129200 2129200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14585 321 13288 121999 97251 97251 1 ESSEPTGSPAPVIQHSSATAPSNGLSVR Unmodified 2762.3471 0.34711456 1055 P17544 ATF7 Cyclic AMP-dependent transcription factor ATF-7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.226 59.336 3 3.0754E-100 66888 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 125.83 112.78 260060000 0 0 0 15065000 16127000 19800000 22244000 22861000 18367000 25980000 29291000 22730000 21165000 18117000 28315000 14586 1055 13289 122000;122001;122002;122003;122004;122005;122006;122007;122008;122009;122010;122011 97252;97253;97254;97255;97256;97257;97258;97259;97260;97261;97262;97263;97264 97256 13 ESSETPDQFMTADETR Unmodified 1842.7578 0.75778698 1031 P16070 CD44 CD44 antigen yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.518 55.644 2 0.00039675 62952 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 83.204 81.681 63862000 0 0 0 3629800 3710900 3267400 3798600 3329900 2467500 5711100 6685500 9144200 6691600 7044100 8381700 14587 1031 13290 122012;122013;122014;122015;122016;122017;122018;122019;122020;122021;122022;122023 97265;97266;97267;97268;97269;97270;97271;97272 97272 8 ESSETPDQFMTADETR Oxidation (M) 1858.7527 0.7527016 1031 P16070 CD44 CD44 antigen yes yes 0 1 0 By matching By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 39.506 39.89 2 0.00015026 44159 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 70.488 70.488 18246000 0 0 0 0 0 2674600 0 0 0 0 4134100 7558100 0 3879300 0 14588 1031 13290 122024;122025;122026;122027;122028 97273;97274;97275 97273 1454 3 ESSETPDQFMTADETRNLQNVDMK Unmodified 2785.2171 0.21708794 1031 P16070 CD44 CD44 antigen yes yes 0 0 1 By MS/MS 2 0 1 1 78.025 73.25 3 1.6386E-57 91398 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.25 115.48 42604000 0 42604000 0 0 0 0 0 0 0 0 0 0 0 0 0 14589 1031 13291 122029 97276 97276 1 ESSEYLK Unmodified 854.40216 0.40216323 465 O75153 CLUH Clustered mitochondria protein homolog yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 18.743 14.709 2 0.022033 19296 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.24 72.432 148790000 16933000 131850000 0 0 0 0 0 0 0 0 0 0 0 0 0 14590 465 13292 122030;122031 97277;97278 97277 2 ESSGEIEAAPVTGTGR Unmodified 1559.7427 0.74272927 2864 Q6AI08 HEATR6 HEAT repeat-containing protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.33 39.51 2 6.254E-20 43801 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 110.66 95.786 62872000 0 0 0 2543900 3655800 7990900 3687900 5719700 3477500 7157400 5419700 5959800 4658200 5809700 6791600 14591 2864 13293 122032;122033;122034;122035;122036;122037;122038;122039;122040;122041;122042;122043 97279;97280;97281;97282;97283;97284;97285;97286;97287;97288;97289;97290 97287 12 ESSGTSEPVHLK Unmodified 1269.6201 0.62009493 2511 Q15283 RASA2 Ras GTPase-activating protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 27.511 23.206 2 0.046453 30621 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.276 50.181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14592 2511 13294 122044 97291 97291 1 ESSIENEIAVLRK Unmodified 1486.7991 0.79912193 3214 Q8IU85 CAMK1D Calcium/calmodulin-dependent protein kinase type 1D yes yes 0 0 1 By MS/MS 2 0 1 1 75.28 72.432 3 0.0049697 88242 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 54.524 46.98 29119000 0 0 29119000 0 0 0 0 0 0 0 0 0 0 0 0 14593 3214 13295 122045 97292 97292 1 ESSIIGVTLFSSTK Unmodified 1467.7821 0.78207489 2153 Q08257 CRYZ Quinone oxidoreductase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 90.084 84.927 2 0.0017075 106826 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.718 59.842 54324000 12932000 37148000 4243300 0 0 0 0 0 0 0 0 0 0 0 0 14594 2153 13296 122046;122047;122048 97293;97294 97293 2 ESSLALNYAAGPR Unmodified 1347.6783 0.67827852 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 58.636 58.512 2 0.0045351 66653 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 67.704 42.866 29454000 0 0 0 5637900 4322300 0 0 6355000 0 0 0 0 7655600 5483600 0 14595 5262 13297 122049;122050;122051;122052;122053 97295;97296;97297;97298;97299 97297 5 ESSLDGLGGTGK Unmodified 1119.5408 0.54078198 3542 Q8WUF5 PPP1R13L RelA-associated inhibitor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 33.776 34.015 2 2.6951E-05 36703 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 95.483 78.098 213400000 0 0 0 0 13658000 16561000 16508000 17605000 13332000 22895000 30871000 17347000 19117000 15499000 30008000 14596 3542 13298 122054;122055;122056;122057;122058;122059;122060;122061;122062;122063;122064 97300;97301;97302;97303;97304;97305;97306;97307;97308;97309;97310;97311;97312;97313 97312 14 ESSLILAVTPANMDLANSDALK Oxidation (M) 2288.157 0.15697751 1630 P50570 DNM2 Dynamin-2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 1 2 1 1 2 1 2 2 1 2 2 85.747 85.839 2;3 1.4824E-80 99532 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 146.47 139.1 152490000 0 0 0 1774400 3281200 15285000 7394000 3688800 11804000 11683000 22175000 19598000 3513700 18399000 33891000 14597 1630 13299 122065;122066;122067;122068;122069;122070;122071;122072;122073;122074;122075;122076;122077;122078;122079;122080;122081;122082 97314;97315;97316;97317;97318;97319;97320;97321;97322;97323;97324;97325 97316 2618 12 ESSLILAVTPANMDLANSDALK Unmodified 2272.1621 0.16206289 1630 P50570 DNM2 Dynamin-2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 4 2 2 91.597 91.724 2;3 4.3963E-20 106284 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.087 80.362 8360700 0 0 0 0 0 0 0 0 0 3246500 0 0 0 0 5114300 14598 1630 13299 122083;122084;122085;122086 97326;97327;97328 97327 3 ESSLLVSELEDTTEK Unmodified 1678.8149 0.81489116 2492 Q15058 KIF14 Kinesin-like protein KIF14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 80.452 79.923 2 3.5979E-38 98938 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 168.02 149.27 105360000 0 61729000 0 0 2526000 2672800 3646700 3244700 3239000 4860400 4088100 5099600 3652100 4212100 6385100 14599 2492 13300 122087;122088;122089;122090;122091;122092;122093;122094;122095;122096;122097;122098;122099 97329;97330;97331;97332;97333;97334;97335;97336;97337;97338;97339;97340;97341 97332 13 ESSLTEPVIVGLLK Unmodified 1483.8498 0.84976052 2442 Q14738 PPP2R5D Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 91.327 90.68 2 0.00033814 104760 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 94.297 83.077 1017500000 0 922570000 15877000 945970 2559600 9014500 3943100 4244200 3541300 14554000 7366900 7640900 4304500 5225600 15689000 14600 2442 13301 122100;122101;122102;122103;122104;122105;122106;122107;122108;122109;122110;122111;122112;122113;122114 97342;97343;97344;97345;97346;97347;97348;97349;97350;97351;97352;97353;97354 97347 13 ESSNSVSNHQLSGFDQAR Unmodified 1961.8827 0.882745 5184 Q9Y450 HBS1L HBS1-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 40.022 40.064 3 1.5865E-07 44568 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 78.95 71.892 60062000 0 0 0 0 7318500 0 9603600 0 8904300 19827000 0 0 14408000 0 0 14601 5184 13302 122115;122116;122117;122118;122119 97355;97356;97357;97358;97359 97355 5 ESSNVVVTER Unmodified 1118.5568 0.5567664 2075 Q02413 DSG1 Desmoglein-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 22.319 22.512 2 2.1448E-11 23051 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 161.28 114.47 528030000 0 0 0 106700000 20285000 20881000 19145000 141170000 15032000 20921000 43289000 63220000 50152000 0 27231000 14602 2075 13303 122120;122121;122122;122123;122124;122125;122126;122127;122128;122129;122130 97360;97361;97362;97363;97364;97365;97366;97367;97368;97369;97370 97368 10 ESSQPDAFSSGGGSK Unmodified 1439.6165 0.61646612 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.641 20.845 2 1.3141E-05 21243 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 105.25 90.578 354420000 0 0 0 18135000 16929000 22152000 22841000 28637000 20153000 27734000 37542000 41243000 39261000 38740000 41054000 14603 1364 13304 122131;122132;122133;122134;122135;122136;122137;122138;122139;122140;122141;122142 97371;97372;97373;97374;97375;97376;97377;97378;97379;97380;97381;97382 97380 12 ESSSEQYVPDVFYK Unmodified 1676.757 0.75698235 3476 Q8TAT6 NPLOC4 Nuclear protein localization protein 4 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.24 2 1 10 1 2 1 1 1 1 1 1 1 1 1 1 77.003 75.873 2 3.9997E-08 87673 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 125.23 113.36 522970000 12671000 364420000 0 0 0 15407000 11907000 9637100 7548400 16006000 18116000 18116000 10887000 12912000 25343000 14604 3476 13305 122143;122144;122145;122146;122147;122148;122149;122150;122151;122152;122153;122154;122155 97383;97384;97385;97386;97387;97388;97389;97390;97391;97392;97393;97394 97387 12 ESSSESFISR Unmodified 1127.5095 0.50948185 4825 Q9P2R3 ANKFY1 Rabankyrin-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 32.634 32.962 2 0.0017532 34913 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.311 75.824 30896000 0 0 0 0 0 4753800 3236000 0 0 5322700 0 8082500 0 0 9501300 14605 4825 13306 122156;122157;122158;122159;122160;122161 97395;97396;97397;97398;97399 97397 5 ESSSVLSCDISADDK Unmodified 1611.6934 0.69339581 2104 Q04726 TLE3 Transducin-like enhancer protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.48 1 2 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 49.735 48.578 2 1.015E-09 54325 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 112.5 103.01 278990000 9597300 15203000 0 7997900 12338000 21705000 17895000 18277000 22188000 18988000 29051000 34334000 24275000 13821000 33325000 14606 2104 13307 122162;122163;122164;122165;122166;122167;122168;122169;122170;122171;122172;122173;122174;122175;122176;122177 97400;97401;97402;97403;97404;97405;97406;97407;97408;97409;97410;97411;97412;97413;97414;97415;97416 97405 17 ESSTSEGADQK Unmodified 1137.4786 0.47857565 2532;2377 Q15424;Q14151 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 no no 0 0 0 By MS/MS 1 0 1 1 106.41 111.68 2 4.4655E-09 92361 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 130.66 103.4 17492000 17492000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14607 2532;2377 13308 122178 97417 97417 1 ESSTVFELK Unmodified 1038.5233 0.523341 2523 Q15370 TCEB2 Transcription elongation factor B polypeptide 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 4 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 56.471 55.451 2 0.0083723 61695 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.812 48.512 3247000000 101530000 2082100000 60562000 42488000 45369000 57473000 51220000 44455000 39285000 72034000 122540000 138220000 74328000 101920000 213460000 14608 2523 13309 122179;122180;122181;122182;122183;122184;122185;122186;122187;122188;122189;122190;122191;122192;122193;122194 97418;97419;97420;97421;97422;97423;97424;97425;97426;97427 97422 9 ESSVEGAENQR Unmodified 1204.532 0.53200821 5292 Q9Y6Q9 NCOA3 Nuclear receptor coactivator 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 9.4164 9.579 2 0.0079321 6613 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 52.79 32.486 16563000 0 0 0 0 1220200 1202400 0 1574700 1215700 1746500 2997600 0 2187000 1385400 3033800 14609 5292 13310 122195;122196;122197;122198;122199;122200;122201;122202;122203 97428;97429 97429 2 ESSVVQAGGSK Unmodified 1047.5197 0.51965261 2835 Q5W0B1 RNF219 RING finger protein 219 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 9.5258 9.7366 2 0.037785 7709 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.191 18.409 5245700 0 0 0 1195500 0 0 0 0 0 870410 748100 1170100 0 0 1261600 14610 2835 13311 122204;122205;122206;122207;122208 97430 97430 1 ESSYDIYRVPSSQSMEDR Unmodified 2147.943 0.94296199 616 O95049 TJP3 Tight junction protein ZO-3 yes yes 0 0 1 By matching By matching By MS/MS By matching By matching 10 0 5 1 1 1 1 1 60.662 60.476 3 0.035045 69140 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 24.41 21.021 14050000 0 0 0 3523000 1739600 3782500 2099700 0 0 2905000 0 0 0 0 0 14611 616 13312 122209;122210;122211;122212;122213 97431 97431 1 ESSYHLLISR Unmodified 1203.6248 0.62478638 2867 Q6BDS2 UHRF1BP1 UHRF1-binding protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.147 52.294 3 0.012947 57836 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.288 36.458 124440000 0 0 0 6111200 6293300 9652400 6371200 11766000 9281700 12149000 11062000 13771000 11875000 10732000 15375000 14612 2867 13313 122214;122215;122216;122217;122218;122219;122220;122221;122222;122223;122224;122225 97432;97433;97434;97435;97436 97434 5 ESTAEKDEL Unmodified 1020.4611 0.46113468 1002 P14625;Q58FF3 HSP90B1;HSP90B2P Endoplasmin;Putative endoplasmin-like protein yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 4 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16.872 16.065 2 0.0035982 14946 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 131.03 103.89 708420000 67306000 147270000 1569200 27537000 23248000 21341000 36929000 29686000 15771000 42103000 64270000 48099000 45538000 58046000 79701000 14613 1002 13314 122226;122227;122228;122229;122230;122231;122232;122233;122234;122235;122236;122237;122238;122239;122240;122241 97437;97438;97439;97440;97441 97440 1 ESTCIHSTWDAK Unmodified 1433.6245 0.62452839 5295 Q9Y6W3 CAPN7 Calpain-7 yes yes 0 0 0 By MS/MS 2 0 1 1 36.735 31.82 3 0.021311 41625 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 33.204 26.506 16100000 0 16100000 0 0 0 0 0 0 0 0 0 0 0 0 0 14614 5295 13315 122242 97442 97442 1 ESTDEILGR Unmodified 1018.4931 0.49310351 2484 Q15042 RAB3GAP1 Rab3 GTPase-activating protein catalytic subunit yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 37.335 37.511 2 0.0085067 40268 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.423 44.024 60804000 0 0 0 4054700 5628400 0 9070100 0 0 0 12605000 13531000 0 0 15914000 14615 2484 13316 122243;122244;122245;122246;122247;122248;122249;122250;122251;122252 97443;97444;97445;97446;97447 97445 5 ESTDEILGRSAFEEEGK Unmodified 1895.8749 0.87486565 2484 Q15042 RAB3GAP1 Rab3 GTPase-activating protein catalytic subunit yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 67.281 60.77 3 0.0027644 74902 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 83.418 74.002 38732000 27110000 11623000 0 0 0 0 0 0 0 0 0 0 0 0 0 14616 2484 13317 122253;122254 97448;97449 97448 0 ESTEFLQQNPVTEYMK Oxidation (M) 1958.8932 0.89315825 2328 Q13616 CUL1 Cullin-1 yes yes 0 1 0 By MS/MS 10 0 1 1 73.291 73.275 2 0.0023584 84511 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 44.564 31.556 5462800 0 0 0 0 0 5462800 0 0 0 0 0 0 0 0 0 14617 2328 13318 122255 97450 97450 3792 1 ESTEFLQQNPVTEYMK Unmodified 1942.8982 0.89824363 2328 Q13616 CUL1 Cullin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 82.873 82.98 2 1.578E-35 95709 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 151.98 137.41 18425000 0 0 0 0 0 3207300 0 0 0 3993000 0 0 0 0 11225000 14618 2328 13318 122256;122257;122258;122259 97451;97452;97453;97454 97453 4 ESTESSNTTIEDEDVK Unmodified 1782.7643 0.76431215 2316 Q13557 CAMK2D Calcium/calmodulin-dependent protein kinase type II subunit delta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 29.859 30.075 2 4.5955E-05 32146 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 93.959 84.637 43461000 0 0 0 10308000 2223500 0 3376600 2247100 0 3085600 4536500 5783800 4189800 4005300 3705200 14619 2316 13319 122260;122261;122262;122263;122264;122265;122266;122267;122268;122269 97455;97456;97457;97458;97459;97460;97461 97457 7 ESTGAQVQVAGDMLPNSTER Oxidation (M) 2104.9695 0.96951109 2521;2520 Q15365;Q15366;P57721 PCBP1;PCBP2;PCBP3 Poly(rC)-binding protein 1;Poly(rC)-binding protein 2;Poly(rC)-binding protein 3 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 2 1 2 1 2 2 2 2 1 1 2 1 52.091 52.21 2;3 4.9044E-288 59571 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 240.2 231.86 2558400000 0 0 0 251110000 116910000 304460000 131140000 198550000 178110000 358340000 335960000 170330000 135640000 221100000 156730000 14620 2520;2521 13320 122270;122271;122272;122273;122274;122275;122276;122277;122278;122279;122280;122281;122282;122283;122284;122285;122286;122287;122288 97462;97463;97464;97465;97466;97467;97468;97469;97470;97471;97472;97473;97474;97475;97476;97477;97478;97479;97480;97481;97482;97483 97478 4144 21 ESTGAQVQVAGDMLPNSTER Unmodified 2088.9746 0.97459647 2521;2520 Q15365;Q15366;P57721 PCBP1;PCBP2;PCBP3 Poly(rC)-binding protein 1;Poly(rC)-binding protein 2;Poly(rC)-binding protein 3 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 27 2 3 2 2 2 2 2 2 2 3 2 3 66.011 66.089 2;3 3.7453E-109 75572 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 220.27 206.86 3030900000 0 0 0 83646000 144220000 255450000 156190000 188120000 138430000 333520000 394890000 289560000 216500000 272290000 558040000 14621 2520;2521 13320 122289;122290;122291;122292;122293;122294;122295;122296;122297;122298;122299;122300;122301;122302;122303;122304;122305;122306;122307;122308;122309;122310;122311;122312;122313;122314;122315 97484;97485;97486;97487;97488;97489;97490;97491;97492;97493;97494;97495;97496;97497;97498;97499;97500;97501;97502;97503;97504;97505;97506;97507;97508;97509;97510;97511 97487 27 ESTGNMVTGQTVCK Oxidation (M) 1526.6705 0.6704923 2476 Q15021 NCAPD2 Condensin complex subunit 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 20.057 20.165 2 0.0002763 20800 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 71.016 55.445 37133000 0 0 0 4162200 3629800 4902800 3373200 3966000 2819600 5340800 0 0 4510100 0 4428100 14622 2476 13321 122316;122317;122318;122319;122320;122321;122322;122323;122324 97512;97513;97514;97515;97516;97517 97514 4081 6 ESTGNMVTGQTVCK Unmodified 1510.6756 0.67557768 2476 Q15021 NCAPD2 Condensin complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.945 32.132 2 7.5548E-19 34548 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 125.72 97.707 122810000 0 0 0 7189200 6868400 14141000 8652400 7605700 5680500 9830300 12205000 14815000 8726200 9021300 18073000 14623 2476 13321 122325;122326;122327;122328;122329;122330;122331;122332;122333;122334;122335;122336 97518;97519;97520;97521;97522;97523;97524;97525;97526;97527;97528;97529 97527 12 ESTGTSGPLQRPQLSK Unmodified 1684.8744 0.87441214 4476 Q9H9Q4 NHEJ1 Non-homologous end-joining factor 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.641 37.822 3 0.0013383 41918 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 49.343 37.32 99364000 0 0 0 4438700 4293300 10749000 6532700 5460300 6788700 10559000 8484200 8660000 11587000 7825500 13987000 14624 4476 13322 122337;122338;122339;122340;122341;122342;122343;122344;122345;122346;122347;122348 97530;97531;97532;97533;97534;97535;97536;97537;97538;97539;97540 97530 11 ESTHQSEDVFLPSPR Unmodified 1727.8115 0.81147753 2224 Q13017 ARHGAP5 Rho GTPase-activating protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 55.721 55.822 3 0.022402 63535 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 24.538 13.433 28490000 0 0 0 3039300 0 5119300 0 0 0 7122000 0 0 4014800 3555600 5638800 14625 2224 13323 122349;122350;122351;122352;122353;122354 97541;97542;97543 97541 3 ESTLEAIGYICQDIDPEQLQDK Unmodified 2564.1952 0.19521351 2457 Q14974 KPNB1 Importin subunit beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.29 0.452 5 2 3 3 1 93.521 88.481 2;3 2.4507E-167 110811 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 288.45 281.39 1018500000 198310000 814770000 5375700 0 0 0 0 0 0 0 0 0 0 0 0 14626 2457 13324 122355;122356;122357;122358;122359;122360;122361 97544;97545;97546;97547;97548;97549;97550;97551;97552 97546 9 ESTLHLINAEEK Unmodified 1382.7042 0.70415892 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.39 3.7 5 1 12 2 2 2 1 1 1 1 1 1 1 1 1 1 1 1 49.758 47.927 2;3 0.0002185 52156 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.709 50.561 358560000 18182000 101720000 54083000 12458000 9876100 12165000 12118000 12784000 10104000 19426000 22197000 16653000 18145000 15037000 23606000 14627 3443 13325 122362;122363;122364;122365;122366;122367;122368;122369;122370;122371;122372;122373;122374;122375;122376;122377;122378;122379 97553;97554;97555;97556;97557;97558;97559;97560;97561;97562;97563;97564 97555 10 ESTLHLVLR Unmodified 1066.6135 0.61349341 1933 P62987;P62979;P0CG47;P0CG48 UBA52;RPS27A;UBB;UBC Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 1 2 1 2 1 1 1 57.622 57.775 2 1.8891E-64 65499 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 202.17 150.31 2869100000 0 0 0 181380000 67936000 140900000 73533000 103610000 88602000 149920000 424660000 409140000 166780000 359000000 703620000 14628 1933 13326 122380;122381;122382;122383;122384;122385;122386;122387;122388;122389;122390;122391;122392;122393 97565;97566;97567;97568;97569;97570;97571;97572;97573;97574;97575;97576;97577;97578;97579;97580;97581;97582;97583;97584;97585;97586;97587;97588 97567 24 ESTNSMETR Unmodified 1053.4397 0.43968773 1856 P61758 VBP1 Prefoldin subunit 3 yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS 10 0 5 1 1 1 1 1 7.2514 7.3756 2 0.016214 4918 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.729 46.742 6617500 0 0 0 0 401900 1511800 0 0 0 0 0 0 1080300 749090 2874400 14629 1856 13327 122394;122395;122396;122397;122398 97589 97589 1 ESTPGDSPSTVNK Unmodified 1317.6048 0.6048388 2779 Q5T6F2 UBAP2 Ubiquitin-associated protein 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 14.9 15.099 2 2.5227E-08 14191 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 107.83 95.784 40675000 0 0 0 0 1643800 1536100 3954700 1761200 2225200 4504700 6834500 3791700 4204000 4175100 6044300 14630 2779 13328 122399;122400;122401;122402;122403;122404;122405;122406;122407;122408;122409 97590;97591;97592;97593;97594;97595;97596;97597 97594 8 ESTQLSPADLTEGKPTDPSK Unmodified 2100.0223 0.02225817 2168 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 56.337 55.681 3 2.3578E-08 70887 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.088 68.924 1087100000 0 50427000 0 61366000 48304000 102740000 52467000 47652000 49767000 99177000 106170000 135570000 88887000 92611000 151990000 14631 2168 13329 122410;122411;122412;122413;122414;122415;122416;122417;122418;122419;122420;122421;122422;122423 97598;97599;97600;97601;97602;97603;97604;97605;97606;97607;97608;97609;97610;97611 97601 14 ESTQNVTSLLK Unmodified 1218.6456 0.6455814 3517 Q8TEQ0 SNX29 Sorting nexin-29 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 59.522 59.475 2 0.0018367 68747 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 82.749 58.628 107990000 0 0 0 8561000 10655000 9528200 14609000 18718000 12354000 14390000 0 0 19180000 0 0 14632 3517 13330 122424;122425;122426;122427;122428;122429;122430;122431 97612;97613;97614;97615;97616 97615 4 ESTSEQMPSFPEMVYYIQEK Oxidation (M) 2438.0658 0.065779243 2828 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 92.285 88.22 3 0.00050848 109473 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 45.047 42.326 36666000 0 36666000 0 0 0 0 0 0 0 0 0 0 0 0 0 14633 2828 13331 122432;122433 97617 97617 4465 1 ESTSEQMPSFPEMVYYIQEK Unmodified 2422.0709 0.070864621 2828 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 96.449 92.435 3 8.1569E-18 114320 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.98 97.721 86540000 0 86540000 0 0 0 0 0 0 0 0 0 0 0 0 0 14634 2828 13331 122434;122435 97618;97619;97620 97618 3 ESTTRLQELEQENK Unmodified 1703.8326 0.83260691 4077 Q99996 AKAP9 A-kinase anchor protein 9 yes yes 0 0 1 By MS/MS 2 0 1 1 43.336 39.614 3 0.0068532 49854 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 49.333 41.925 13267000 0 0 13267000 0 0 0 0 0 0 0 0 0 0 0 0 14635 4077 13332 122436 97621 97621 1 ESTTSEQSARMTAMDNASK Unmodified 2043.8837 0.88373255 1374 P36542 ATP5C1 ATP synthase subunit gamma, mitochondrial yes yes 0 0 1 By MS/MS 2 0 1 1 33.228 28.584 3 0.00045869 37491 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 55.453 45.54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14636 1374 13333 122437 97622 97622 1 ESTTTPGQYVLTGLQSGQPK Unmodified 2091.0484 0.048413341 1245 P29353 SHC1 SHC-transforming protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 2 2 2 2 1 1 2 2 2 1 1 2 76.755 76.796 2;3 1.2724E-20 88233 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 119.96 113.08 192550000 0 0 0 6351500 11493000 18939000 16896000 5519900 5221800 29146000 28525000 23511000 8859100 7026000 31062000 14637 1245 13334 122438;122439;122440;122441;122442;122443;122444;122445;122446;122447;122448;122449;122450;122451;122452;122453;122454;122455;122456;122457 97623;97624;97625;97626;97627;97628;97629;97630;97631;97632;97633;97634;97635 97627 13 ESTTVTCTGEK Unmodified 1211.534 0.53398204 3631 Q92576 PHF3 PHD finger protein 3 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 10.384 10.5 2 0.0077486 9256 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 61.353 41.357 31907000 0 0 0 2315800 2201800 2388300 3080500 2121300 2368400 2883000 0 4920000 3514500 1896200 4217300 14638 3631 13335 122458;122459;122460;122461;122462;122463;122464;122465;122466;122467;122468 97636;97637 97636 2 ESTTYISWK Unmodified 1113.5342 0.53424004 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 55.184 55.458 2 0.017596 61949 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.549 37.564 62687000 0 0 0 0 0 6314800 3931500 5629300 5287800 7962300 7934400 10010000 7204900 1176500 7235500 14639 3023 13336 122469;122470;122471;122472;122473;122474;122475;122476;122477;122478 97638 97638 1 ESTVHIETHQNTSK Unmodified 1609.7696 0.76961272 410 O60524 NEMF Nuclear export mediator factor NEMF yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 3 2 1 1 1 1 1 1 1 1 1 1 1 1 14.203 13.419 3;4 1.1718E-18 17194 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 132.31 114.24 153550000 0 29418000 91602000 1107200 1206000 2537300 1813600 1357200 1272500 3385500 4561500 3296700 3243200 2682700 6065400 14640 410 13337 122479;122480;122481;122482;122483;122484;122485;122486;122487;122488;122489;122490;122491;122492;122493;122494;122495 97639;97640;97641;97642 97641 2 ESTVQGAYGSEDMK Unmodified 1500.6402 0.64023803 1241 P29083 GTF2E1 General transcription factor IIE subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.256 32.442 2 1.531E-12 35433 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 105.46 101.16 89019000 0 0 0 3921900 3771200 5772500 4784800 9307900 3832400 8955400 11516000 9966800 8030900 6029200 13130000 14641 1241 13338 122496;122497;122498;122499;122500;122501;122502;122503;122504;122505;122506;122507 97643;97644;97645;97646;97647;97648;97649;97650;97651;97652;97653;97654 97644 12 ESTVQGAYGSEDMK Oxidation (M) 1516.6352 0.63515265 1241 P29083 GTF2E1 General transcription factor IIE subunit 1 yes yes 0 1 0 By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 21.287 21.561 2 0.0069374 21427 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.154 28.99 18314000 0 0 0 0 1749300 2091000 0 0 0 0 0 3209400 4363900 2223900 4676000 14642 1241 13338 122508;122509;122510;122511;122512;122513;122514 97655;97656 97656 1835 2 ESTVQMNYVSNVSK Unmodified 1584.7454 0.7453718 1040 P16591 FER Tyrosine-protein kinase Fer yes yes 0 0 0 By MS/MS 2 0 1 1 55.999 50.184 2 0.0014667 64868 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.08 96.414 14416000 0 14416000 0 0 0 0 0 0 0 0 0 0 0 0 0 14643 1040 13339 122515 97657 97657 1 ESTYLSSLK Unmodified 1026.5233 0.523341 2570 Q15742 NAB2 NGFI-A-binding protein 2 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 47.726 48.365 2 0.029817 53416 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.423 30.866 41873000 0 0 0 0 0 0 0 0 0 0 13632000 15826000 0 0 12415000 14644 2570 13340 122516;122517;122518 97658;97659 97658 2 ESVAHWEAQIAEIIQWVSDEK Unmodified 2467.202 0.20195387 5247 Q9Y5S2 CDC42BPB Serine/threonine-protein kinase MRCK beta yes yes 0 0 0 By MS/MS 2 0 1 1 104.17 96.039 3 4.976E-06 123407 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.644 58.557 1687900 1687900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14645 5247 13341 122519 97660 97660 1 ESVDGQWVCISDVNK Unmodified 1734.7883 0.78829925 1769 P55735 SEC13 Protein SEC13 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 73.42 72.369 2 1.566E-57 89577 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 173.37 158.55 525780000 9245100 330680000 0 8733100 9710400 12769000 7524900 10160000 10250000 16686000 21418000 22104000 13533000 15620000 37350000 14646 1769 13342 122520;122521;122522;122523;122524;122525;122526;122527;122528;122529;122530;122531;122532;122533;122534 97661;97662;97663;97664;97665;97666;97667;97668;97669;97670;97671;97672;97673;97674;97675;97676;97677;97678;97679 97665 19 ESVDHLTIPSR Unmodified 1252.6412 0.64116473 1441 P41252 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 1 2 1 2 1 2 2 2 1 1 2 48.824 49.056 2;3 0.00022224 54234 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.338 78.286 724810000 0 0 0 22924000 22423000 70712000 28077000 26618000 49495000 52473000 79466000 111130000 55460000 57358000 148670000 14647 1441 13343 122535;122536;122537;122538;122539;122540;122541;122542;122543;122544;122545;122546;122547;122548;122549;122550;122551;122552 97680;97681;97682;97683;97684;97685;97686;97687;97688;97689;97690 97684 11 ESVDLPEEK Unmodified 1044.4975 0.49752018 3601 Q8WYP5 AHCTF1 Protein ELYS yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 36.42 36.603 2 0.0052023 39183 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 80.438 53.836 59720000 0 0 0 5036200 3916400 4461500 4892600 3699400 5025300 0 4196300 8365000 7301600 5733300 7091900 14648 3601 13344 122553;122554;122555;122556;122557;122558;122559;122560;122561;122562;122563 97691;97692;97693;97694;97695;97696;97697;97698;97699 97695 9 ESVELALK Unmodified 887.4964 0.49639797 360 O43719 HTATSF1 HIV Tat-specific factor 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 50.87 50.821 2 0.035595 57073 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 52.403 13.597 20328000 0 0 0 0 5946200 0 0 0 0 0 14382000 0 0 0 0 14649 360 13345 122564;122565 97700 97700 1 ESVELPLTHPEYYEEMGIKPPK Oxidation (M) 2601.2673 0.26725624 1875 P62191 PSMC1 26S protease regulatory subunit 4 yes yes 0 1 1 By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 2 1 2 77.591 76.944 3;4 2.1457E-10 97750 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.027 69.569 109980000 10786000 0 0 0 1519700 4688400 2119500 4702700 4336900 31238000 8608400 41983000 0 0 0 14650 1875 13346 122566;122567;122568;122569;122570;122571;122572;122573;122574;122575;122576 97701;97702;97703 97702 3034 3 ESVELPLTHPEYYEEMGIKPPK Unmodified 2585.2723 0.27234162 1875 P62191 PSMC1 26S protease regulatory subunit 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 6 2 2 2 87.063 81.928 3;4 1.0842E-10 103556 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.999 53.187 174230000 76953000 75300000 21978000 0 0 0 0 0 0 0 0 0 0 0 0 14651 1875 13346 122577;122578;122579;122580;122581;122582 97704;97705;97706;97707;97708;97709;97710 97704 6 ESVEQQADSFK Unmodified 1266.5728 0.57281039 394 O60313 OPA1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes yes 0 0 0 By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 38.067 38.234 2 0.035313 42481 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 52.49 39.036 23677000 0 0 0 1484000 1951200 2331200 1588200 3048400 1613200 0 3046600 2717600 0 1975900 3920400 14652 394 13347 122583;122584;122585;122586;122587;122588;122589;122590;122591;122592;122593 97711;97712 97711 1 ESVEQRSTVVDNDADFQGTK Unmodified 2224.0244 0.024383435 3283 Q8IYH5 ZZZ3 ZZ-type zinc finger-containing protein 3 yes yes 0 0 1 By MS/MS 2 0 1 1 47.677 42.114 3 1.4177E-06 54779 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 45.069 42.101 21286000 0 21286000 0 0 0 0 0 0 0 0 0 0 0 0 0 14653 3283 13348 122594 97713 97713 1 ESVFFAEPPFK Unmodified 1296.639 0.63903946 4792 Q9P0K7 RAI14 Ankycorbin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 83.927 84.018 2 0.0078133 96940 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.089 42.566 43189000 0 0 0 2960500 0 3982000 4119300 4737100 4345300 4649000 4922500 4408800 3769500 0 5294700 14654 4792 13349 122595;122596;122597;122598;122599;122600;122601;122602;122603;122604 97714;97715;97716;97717;97718 97715 5 ESVFQSGAHAYR Unmodified 1350.6317 0.63166267 5173 Q9Y3R4 NEU2 Sialidase-2 yes yes 0 0 0 By MS/MS 10 0 1 1 36.733 36.264 3 0.023555 40568 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 27.098 20.21 8063700 0 0 0 8063700 0 0 0 0 0 0 0 0 0 0 0 14655 5173 13350 122605 97719 97719 1 ESVFTNERFPLR Unmodified 1493.7627 0.76267685 358 O43709 WBSCR22 Probable 18S rRNA (guanine-N(7))-methyltransferase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 69.864 69.937 3 1.8775E-05 81215 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 96.604 82.575 359140000 0 0 0 27428000 12612000 47250000 19496000 26572000 30697000 0 32486000 45764000 28769000 29983000 58082000 14656 358 13351 122606;122607;122608;122609;122610;122611;122612;122613;122614;122615;122616 97720;97721;97722;97723;97724;97725;97726;97727;97728;97729;97730;97731;97732 97729 9 ESVGSSSTSNEGGR Unmodified 1352.5804 0.58041496 2879 Q6GQQ9 OTUD7B OTU domain-containing protein 7B yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 6.9725 7.1077 2 1.0158E-07 5078 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 93.058 73.271 45534000 0 0 0 3016500 2305900 0 3869100 0 4200300 4518300 6521200 2953400 4346000 5778200 8025400 14657 2879 13352 122617;122618;122619;122620;122621;122622;122623;122624;122625;122626 97733;97734;97735 97733 3 ESVGSSSTSNEGGRRK Unmodified 1636.7765 0.77648901 2879 Q6GQQ9 OTUD7B OTU domain-containing protein 7B yes yes 0 0 2 By MS/MS 2 0 1 1 6.178 2.7458 3 2.2956E-30 5681 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.45 80.048 49213000 49213000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14658 2879 13353 122627 97736 97736 1 ESVHLETYPK Unmodified 1201.5979 0.59790293 3994 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.42 2 1 1 24 2 2 2 2 2 2 2 2 2 2 2 2 2 36.236 36.026 2;3 0.028547 39670 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 79.059 57.784 310370000 0 71588000 0 11698000 14373000 18739000 16460000 14397000 14253000 18747000 22146000 28150000 25606000 22259000 31951000 14659 3994 13354 122628;122629;122630;122631;122632;122633;122634;122635;122636;122637;122638;122639;122640;122641;122642;122643;122644;122645;122646;122647;122648;122649;122650;122651;122652;122653 97737;97738;97739;97740 97738 1 ESVLQFYPK Unmodified 1109.5757 0.57571092 4857 Q9UBT2 UBA2 SUMO-activating enzyme subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 73.59 72.232 2 0.00034415 87374 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 126.67 109.28 2434700000 68028000 2193800000 37411000 0 0 8833400 6534500 10258000 4324900 10594000 0 22257000 5590100 18830000 48271000 14660 4857 13355 122654;122655;122656;122657;122658;122659;122660;122661;122662;122663;122664;122665;122666;122667 97741;97742;97743;97744;97745;97746;97747;97748;97749;97750;97751;97752;97753 97747 13 ESVLSTYTVNDLSMMK Unmodified 1816.8587 0.858687 3331 Q8N4J0 C9orf41 UPF0586 protein C9orf41 yes yes 0 0 0 By MS/MS 2 0 1 1 89.01 84.138 2 0.00085348 104589 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.565 64.198 45307000 0 45307000 0 0 0 0 0 0 0 0 0 0 0 0 0 14661 3331 13356 122668 97754 97754 1 ESVNAAFEMTLTEGSK Oxidation (M) 1728.7876 0.78763055 1267 P30084 ECHS1 Enoyl-CoA hydratase, mitochondrial yes yes 0 1 0 By MS/MS 3 0 1 1 76.704 73.225 2 0.0032952 87824 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 64.55 55.596 5535100 0 5535100 0 0 0 0 0 0 0 0 0 0 0 0 0 14662 1267 13357 122669 97755 97755 1867 0 ESVPEFPLSPPK Unmodified 1325.6867 0.68671794 1043 P16949 STMN1 Stathmin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.06 3.82 1 3 2 10 3 2 1 1 1 1 1 1 1 1 1 1 1 81.103 80.066 2 0.00028841 90531 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 82.749 74.824 8618900000 198370000 7485800000 57840000 9915600 12000000 0 29595000 18274000 0 20930000 142610000 162800000 20522000 158460000 301710000 14663 1043 13358 122670;122671;122672;122673;122674;122675;122676;122677;122678;122679;122680;122681;122682;122683;122684;122685 97756;97757;97758;97759;97760;97761;97762;97763;97764;97765;97766;97767;97768;97769;97770 97768 13 ESVQGYTTK Unmodified 1011.4873 0.48728985 2439 Q14694 USP10 Ubiquitin carboxyl-terminal hydrolase 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 17.342 17.55 2 0.033195 17393 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 67.494 39.239 6934400 0 0 0 4927200 0 0 0 0 0 0 0 0 0 0 2007200 14664 2439 13359 122686;122687;122688;122689 97771;97772;97773 97772 3 ESVQQEPEREQVQPK Unmodified 1809.8857 0.88570511 3921 Q96LR5 UBE2E2 Ubiquitin-conjugating enzyme E2 E2 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 21.887 22.11 3 0.0014502 23080 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 48.704 37.061 26548000 0 0 0 0 0 7820200 3378700 0 0 3823700 0 0 0 4177700 7348000 14665 3921 13360 122690;122691;122692;122693;122694 97774;97775;97776;97777 97775 4 ESVSTASDQPSHSLER Unmodified 1728.7915 0.79147037 3521 Q8TEW0 PARD3 Partitioning defective 3 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 25.807 26.161 3 0.00034577 27893 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 62.055 49.77 57653000 0 0 0 0 0 0 6560100 5030000 6154000 0 9344000 11159000 6796100 6042000 6568800 14666 3521 13361 122695;122696;122697;122698;122699;122700;122701;122702 97778;97779;97780;97781;97782;97783;97784;97785;97786;97787 97778 10 ESVTDYTTPSSSLPNTVATNNTK Unmodified 2426.1449 0.1448925 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 65.606 65.691 2;3 8.7943E-93 75185 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 210.34 205.35 468720000 0 0 0 23388000 29359000 31527000 33405000 34079000 30448000 46823000 50824000 58403000 42860000 37784000 49814000 14667 5216 13362 122703;122704;122705;122706;122707;122708;122709;122710;122711;122712;122713;122714;122715;122716;122717;122718;122719;122720;122721;122722;122723;122724;122725;122726 97788;97789;97790;97791;97792;97793;97794;97795;97796;97797;97798;97799;97800 97793 13 ESWEMDTK Oxidation (M) 1040.4121 0.41207599 2294 Q13451 FKBP5 Peptidyl-prolyl cis-trans isomerase FKBP5;Peptidyl-prolyl cis-trans isomerase FKBP5, N-terminally processed yes yes 0 1 0 By MS/MS 2 0 1 1 22.546 18.663 2 0.039488 24441 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.383 54.387 19104000 0 19104000 0 0 0 0 0 0 0 0 0 0 0 0 0 14668 2294 13363 122727 97801 97801 1 ESWEMDTK Unmodified 1024.4172 0.41716137 2294 Q13451 FKBP5 Peptidyl-prolyl cis-trans isomerase FKBP5;Peptidyl-prolyl cis-trans isomerase FKBP5, N-terminally processed yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 39.207 34.369 2 0.015741 44454 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.374 79.217 64373000 0 64373000 0 0 0 0 0 0 0 0 0 0 0 0 0 14669 2294 13363 122728;122729 97802 97802 1 ESWEMNSEEK Unmodified 1267.5027 0.50268192 2080 Q02790 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 35.162 33.857 1;2 6.6715E-07 42427 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 152.34 149.23 902800000 21295000 565430000 1273300 10845000 8148200 17708000 13755000 11851000 10756000 21127000 35850000 33317000 16559000 29298000 105580000 14670 2080 13364 122730;122731;122732;122733;122734;122735;122736;122737;122738;122739;122740;122741;122742;122743;122744;122745;122746 97803;97804;97805;97806;97807;97808;97809;97810;97811;97812;97813;97814;97815;97816;97817;97818;97819;97820;97821 97806 18 ESWEMNSEEK Oxidation (M) 1283.4976 0.49759654 2080 Q02790 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.81 1 4 11 2 2 1 1 1 1 1 1 1 1 1 1 1 1 26.329 25.797 2 0.0025673 23684 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.139 92.243 407690000 45424000 261540000 1578800 5393600 3872700 6680800 5798400 4049900 4681400 8281000 14583000 15716000 0 9552500 20542000 14671 2080 13364 122747;122748;122749;122750;122751;122752;122753;122754;122755;122756;122757;122758;122759;122760;122761;122762 97822;97823;97824;97825;97826;97827 97822 3385 5 ESWHGKPLPK Unmodified 1177.6244 0.62439245 1249 P29401 TKT Transketolase yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By matching By MS/MS 5.67 3.89 4 1 4 3 2 1 1 1 1 26.04 23.692 2;3 0.022473 22838 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 34.721 13.257 3297800000 3153500000 0 60320000 2894600 0 0 0 0 0 0 1395000 39786000 0 39909000 0 14672 1249 13365 122763;122764;122765;122766;122767;122768;122769;122770;122771 97828;97829;97830;97831 97831 4 ESYDAPPTPSGAR Unmodified 1346.6103 0.61025853 3983 Q96S55 WRNIP1 ATPase WRNIP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.813 33.996 2 0.0096943 36306 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 56.548 47.334 82103000 0 0 0 5818900 4724900 5965700 5079600 4991000 3281200 6413200 13473000 10702000 7696100 4514200 9442400 14673 3983 13366 122772;122773;122774;122775;122776;122777;122778;122779;122780;122781;122782;122783 97832;97833;97834;97835;97836;97837;97838 97836 7 ESYDPDVIPLFDK Unmodified 1536.7348 0.73479034 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 0 By MS/MS 10 0 1 1 86.376 86.535 2 0.0032921 100127 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.471 39.977 11268000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11268000 14674 3443 13367 122784 97839 97839 1 ESYHKPDQQK Unmodified 1258.5942 0.59421454 1249 P29401 TKT Transketolase yes yes 0 0 1 By MS/MS 2.67 0.471 1 2 3 20.128 16.291 2 1.5252E-59 26106 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 221.94 185.18 23888000 0 23888000 0 0 0 0 0 0 0 0 0 0 0 0 0 14675 1249 13368 122785;122786;122787 97840;97841 97840 2 ESYLAETR Unmodified 967.46108 0.4610751 3134 Q86TC9 MYPN Myopalladin yes yes 0 0 0 By MS/MS 10 0 1 1 28.158 28.184 2 0.026823 30211 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 57.722 17.619 27018000 0 0 0 0 0 0 27018000 0 0 0 0 0 0 0 0 14676 3134 13369 122788 97842 97842 1 ESYPVFYLFRDGDFENPVPYTGAVK Unmodified 2909.3912 0.3912112 1260 P30040 ERP29 Endoplasmic reticulum resident protein 29 yes yes 0 0 1 By MS/MS 2 0 1 1 98.359 90.228 3 8.136E-05 116426 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.131 49.904 21263000 21263000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14677 1260 13370 122789 97843 97843 1 ESYSALMRELELK Unmodified 1567.7916 0.79159371 2501 Q15149 PLEC Plectin yes yes 0 0 1 By MS/MS 2 0 1 1 88.94 80.81 3 0.041899 105099 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 33.685 13.589 5912100 5912100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14678 2501 13371 122790 97844 97844 1 ESYSIYVYK Unmodified 1150.5546 0.55464113 833 Q8N257;Q16778;P33778;P23527;P06899 HIST3H2BB;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ Histone H2B type 3-B;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 60.067 60.175 2 0.031872 69060 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 47.574 30.334 59743000 0 0 0 10128000 4460300 0 5046900 0 5063000 7929200 4846300 7838300 5610200 3616700 5204700 14679 833 13372 122791;122792;122793;122794;122795;122796;122797;122798;122799;122800 97845;97846;97847;97848;97849 97849 5 ESYSVYVYK Unmodified 1136.539 0.53899107 432 Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;P57053;O60814 HIST1H2BL;HIST1H2BM;HIST1H2BN;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;H2BFS;HIST1H2BK Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K yes no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52.882 52.314 2 0.011907 59375 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 62.107 32.032 623390000 0 167520000 4473000 44049000 20885000 41663000 37267000 25714000 29142000 51435000 34531000 43014000 42015000 26517000 55161000 14680 432 13373 122801;122802;122803;122804;122805;122806;122807;122808;122809;122810;122811;122812;122813;122814 97850;97851;97852;97853;97854;97855;97856;97857;97858;97859;97860 97850 11 ESYYQLMK Oxidation (M) 1076.4848 0.48484701 1093 P19623 SRM Spermidine synthase yes yes 0 1 0 By MS/MS 3 0 1 1 41.047 36.345 2 0.038386 45320 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 68.915 64.559 13575000 0 13575000 0 0 0 0 0 0 0 0 0 0 0 0 0 14681 1093 13374 122815 97861 97861 1 ETAAACVEK Unmodified 977.4488 0.44879585 2553 Q15631 TSN Translin yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 11.724 11.011 2 0.0099322 9905 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 65.305 33.726 142650000 44326000 34516000 0 0 2211700 8466300 4118700 0 0 6753300 0 11633000 0 8175100 22445000 14682 2553 13375 122816;122817;122818;122819;122820;122821;122822;122823;122824 97862;97863 97863 2 ETAAEILFDEVLTFAK Unmodified 1795.9244 0.92438203 3266 Q8IXQ6 PARP9 Poly [ADP-ribose] polymerase 9 yes yes 0 0 0 By MS/MS 2 0 1 1 105.46 97.33 2 0.00056381 124966 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.64 81.439 2759200 2759200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14683 3266 13376 122825 97864;97865;97866 97865 3 ETAAGGLTLK Unmodified 959.52876 0.52876073 3663 Q92797 SYMPK Symplekin yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 38.99 38.123 2 0.0026251 48765 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.62 49.067 311000000 0 205090000 0 10703000 0 0 0 14894000 10945000 0 15744000 21469000 16272000 0 15884000 14684 3663 13377 122826;122827;122828;122829;122830;122831;122832;122833;122834 97867;97868;97869 97867 2 ETADAITK Unmodified 847.42871 0.42871234 2044 Q00765 REEP5 Receptor expression-enhancing protein 5 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 11.637 11.566 2 0.028576 10703 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 56.659 14.767 17462000 0 0 0 8692100 0 0 8770100 0 0 0 0 0 0 0 0 14685 2044 13378 122835;122836 97870 97870 1 ETADCPGHGLLFK Unmodified 1443.6816 0.68164933 2924 Q6P1R4 DUS1L tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like yes yes 0 0 0 By MS/MS 2 0 1 1 59.781 55.997 3 0.013707 69642 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 42.031 34.306 6012900 0 0 6012900 0 0 0 0 0 0 0 0 0 0 0 0 14686 2924 13379 122837 97871;97872 97871 2 ETADITHALSK Unmodified 1184.6037 0.60371659 2484 Q15042 RAB3GAP1 Rab3 GTPase-activating protein catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching 9 2.65 1 7 1 1 1 1 1 1 1 1 37.524 37.132 2 3.7797E-07 48170 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.74 76.318 117960000 0 76254000 0 7448700 0 6320500 0 2475900 0 0 5236500 11452000 0 3605700 5165800 14687 2484 13380 122838;122839;122840;122841;122842;122843;122844;122845 97873;97874 97873 2 ETADTDTADQVMASFK Unmodified 1728.7512 0.75124504 971 P12814 ACTN1 Alpha-actinin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 73.78 73.896 2 1.1442E-28 84564 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 177.1 165.24 134570000 0 0 0 0 3537700 8579400 4570000 5051300 4411900 9710200 18372000 15995000 6884300 13465000 43992000 14688 971 13381 122846;122847;122848;122849;122850;122851;122852;122853;122854;122855;122856 97875;97876;97877;97878;97879;97880;97881;97882;97883;97884 97878 10 ETADTDTADQVMASFK Oxidation (M) 1744.7462 0.74615966 971 P12814 ACTN1 Alpha-actinin-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 50.412 51.107 2 4.3751E-08 56855 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.663 75.699 20823000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20823000 14689 971 13381 122857;122858;122859 97885;97886;97887 97885 1281 3 ETAEAYLGK Unmodified 980.48148 0.48147619 932 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.18 3.74 3 1 7 1 2 1 1 1 1 1 1 1 1 34.466 32.85 2 0.0033419 35794 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.37 72.984 4826800000 104870000 3613900000 8676000 105620000 0 0 116800000 102420000 0 0 210210000 0 150120000 164240000 249890000 14690 932 13382 122860;122861;122862;122863;122864;122865;122866;122867;122868;122869;122870 97888;97889;97890;97891;97892;97893;97894;97895;97896;97897;97898;97899 97890 12 ETAEEEKDDLEER Unmodified 1591.6849 0.68493962 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.164 23.37 3 0.00024568 24134 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 67.234 54.467 70515000 0 0 0 6600000 3108600 5426800 4743400 5416400 2248300 6021600 7379400 7645100 8692300 3532200 9701000 14691 2446 13383 122871;122872;122873;122874;122875;122876;122877;122878;122879;122880;122881;122882 97900;97901;97902;97903;97904;97905 97905 6 ETAEHENRELQSK Unmodified 1569.7383 0.73831259 3393 Q8NBI5 SLC43A3 Solute carrier family 43 member 3 yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 6.7202 6.663 3 3.648E-07 6878 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 94.688 75.588 131750000 0 0 42500000 5031600 5292000 3964300 6967300 4958000 7137000 9384800 11575000 6285600 11939000 9233500 7483800 14692 3393 13384 122883;122884;122885;122886;122887;122888;122889;122890;122891;122892;122893;122894;122895 97906;97907;97908;97909;97910;97911 97909 4 ETAEHLDLAGASSRPK Unmodified 1680.8431 0.84311201 3180 Q86W92 PPFIBP1 Liprin-beta-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.69 1.54 1 25 1 2 2 2 3 2 2 2 2 2 2 2 2 34.626 34.663 3;4 7.0127E-38 38688 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 140.19 126.45 2143500000 0 0 51978000 86501000 82672000 160350000 120670000 110650000 110790000 168790000 435490000 233890000 175460000 150980000 255280000 14693 3180 13385 122896;122897;122898;122899;122900;122901;122902;122903;122904;122905;122906;122907;122908;122909;122910;122911;122912;122913;122914;122915;122916;122917;122918;122919;122920;122921 97912;97913;97914;97915;97916;97917;97918;97919;97920;97921;97922;97923;97924;97925;97926;97927;97928;97929 97928 10 ETAEMADRNK Unmodified 1163.5241 0.52408606 3025 Q70E73 RAPH1 Ras-associated and pleckstrin homology domains-containing protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 7.2224 3.9794 2 5.3738E-05 6230 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 156.62 129.36 32545000 0 32545000 0 0 0 0 0 0 0 0 0 0 0 0 0 14694 3025 13386 122922 97930 97930 1 ETAENSLK Unmodified 890.43453 0.434526 3633 Q92598 HSPH1 Heat shock protein 105 kDa yes yes 0 0 0 By MS/MS By matching By MS/MS 2 0 3 1 1 1 9.2341 6.1485 2 0.015404 10566 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.992 4.9453 159970000 44776000 105680000 9516900 0 0 0 0 0 0 0 0 0 0 0 0 14695 3633 13387 122923;122924;122925 97931 97931 1 ETAENYLGHTAK Unmodified 1332.631 0.63099397 1399 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.52 3.62 6 2 17 2 4 2 2 1 2 2 2 2 2 2 2 30.486 29.191 2;3 3.7653E-43 30487 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 180.67 169.18 2700600000 51024000 2120800000 32530000 21785000 0 0 23579000 33809000 0 48646000 66642000 61838000 54611000 54284000 131120000 14696 1399 13388 122926;122927;122928;122929;122930;122931;122932;122933;122934;122935;122936;122937;122938;122939;122940;122941;122942;122943;122944;122945;122946;122947;122948;122949;122950 97932;97933;97934;97935;97936;97937;97938;97939;97940;97941;97942;97943;97944;97945;97946;97947 97934 14 ETAESVLK Unmodified 875.46001 0.46001246 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 26.461 25.765 2 0.014312 26307 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 70.69 27.229 1772500000 86373000 1428600000 0 6110200 0 7587300 0 7776700 3940000 13575000 35617000 42365000 0 30910000 109710000 14697 1337 13389 122951;122952;122953;122954;122955;122956;122957;122958;122959;122960;122961 97948;97949;97950;97951;97952;97953;97954;97955 97954 8 ETAGNSGSTHEGREQLK Unmodified 1799.8398 0.83981755 4470 Q9H9C1 VIPAS39 Spermatogenesis-defective protein 39 homolog yes yes 0 0 1 By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 7.0272 7.1466 3 6.3807E-10 4591 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.138 77.608 40018000 0 0 0 1248600 1510500 3669300 2227900 3060500 0 4499300 6289900 4337000 3342700 4553900 5278700 14698 4470 13390 122962;122963;122964;122965;122966;122967;122968;122969;122970;122971;122972 97956;97957;97958;97959 97956 4 ETAHSVLGSDANDVVITVPFDFGEK Unmodified 2646.2813 0.2813264 2175 Q0VDF9 HSPA14 Heat shock 70 kDa protein 14 yes yes 0 0 0 By MS/MS By MS/MS 3 0 2 1 1 94.201 90.828 3 8.1206E-05 108867 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 42.806 35.36 4431800 981280 3450600 0 0 0 0 0 0 0 0 0 0 0 0 0 14699 2175 13391 122973;122974 97960;97961;97962 97961 3 ETAIELGYLTAEQFDEWVK Unmodified 2241.0841 0.084130145 854 P07954 FH Fumarate hydratase, mitochondrial yes yes 0 0 0 By MS/MS By matching 2.5 0.5 2 2 2 2 100.13 95.184 3 1.792E-72 118971 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 158.64 150.14 119460000 93886000 25574000 0 0 0 0 0 0 0 0 0 0 0 0 0 14700 854 13392 122975;122976;122977;122978 97963;97964 97964 2 ETAIQTEDSAISESPEEPLPNLKPK Unmodified 2722.3549 0.35488528 2708 Q53SF7 COBLL1 Cordon-bleu protein-like 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 74.564 74.689 3 7.9935E-19 86042 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 75.646 72.997 86201000 0 0 0 0 7325200 0 6045700 8935600 0 12315000 10975000 11548000 8329800 7474900 13251000 14701 2708 13393 122979;122980;122981;122982;122983;122984;122985;122986;122987 97965;97966;97967;97968;97969;97970;97971;97972;97973;97974;97975;97976 97975 12 ETALLQELEDLELGI Unmodified 1684.8771 0.87709748 4242 Q9BY44 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 102.94 98.461 2 3.1993E-61 122035 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 185.29 176.78 222310000 151410000 67179000 3716000 0 0 0 0 0 0 0 0 0 0 0 0 14702 4242 13394 122988;122989;122990;122991;122992 97977;97978;97979;97980;97981;97982;97983;97984 97977 8 ETALLVDRYK Unmodified 1206.6608 0.66083754 2222 Q12996 CSTF3 Cleavage stimulation factor subunit 3 yes yes 0 0 1 By MS/MS 2 0 1 1 52.526 48.605 2 0.045217 60980 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 80.239 47.884 8650300 0 0 8650300 0 0 0 0 0 0 0 0 0 0 0 0 14703 2222 13395 122993 97985 97985 1 ETALPSTK Unmodified 845.44945 0.44944778 2974 Q6UN15 FIP1L1 Pre-mRNA 3'-end-processing factor FIP1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 18.623 18.79 2 0.015996 19482 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 67.981 18.622 62657000 0 0 0 4570500 4984500 4690900 6007700 3812100 4484100 6192300 0 6353700 6352300 4952600 10257000 14704 2974 13396 122994;122995;122996;122997;122998;122999;123000;123001;123002;123003;123004 97986;97987 97987 2 ETANAIVSQQTPQR Unmodified 1541.7798 0.77978347 1425 P40938 RFC3 Replication factor C subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.522 35.704 2 7.8272E-28 39277 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 189.13 174.26 492440000 0 0 0 25641000 29622000 32584000 42852000 29149000 29782000 42801000 47759000 60711000 58665000 40300000 52576000 14705 1425 13397 123005;123006;123007;123008;123009;123010;123011;123012;123013;123014;123015;123016 97988;97989;97990;97991;97992;97993;97994;97995;97996;97997;97998;97999 97994 12 ETANLQER Unmodified 959.46722 0.46722311 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 12.103 12.243 2 0.011282 11110 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 77.282 28.721 42366000 0 0 0 2527500 2796400 3765900 0 2719000 0 4195600 5999000 0 5029700 3613100 11720000 14706 3443 13398 123017;123018;123019;123020;123021;123022;123023;123024;123025 98000;98001;98002;98003;98004;98005 98004 6 ETANLQERSISNDDGEEK Unmodified 2033.9138 0.91377035 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 32.668 27.664 3 3.2474E-05 36394 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.243 56.963 35047000 7603700 27444000 0 0 0 0 0 0 0 0 0 0 0 0 0 14707 3443 13399 123026;123027;123028 98006;98007;98008;98009;98010 98006 5 ETAPAVQR Unmodified 870.45593 0.45593014 5005 Q9ULU4 ZMYND8 Protein kinase C-binding protein 1 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 13.27 13.345 2 0.017995 12668 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 64.803 41.784 28443000 0 0 0 2888300 4052100 3598300 3914200 2837200 2935800 4306400 3910600 0 0 0 0 14708 5005 13400 123029;123030;123031;123032;123033;123034;123035;123036 98011;98012;98013;98014 98011 4 ETAPGGTESQSLR Unmodified 1331.6317 0.63172225 3319 Q8N392 ARHGAP18 Rho GTPase-activating protein 18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 22.21 22.456 2 0.0013319 22317 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 83.397 61.16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14709 3319 13401 123037;123038;123039;123040;123041;123042;123043;123044 98015;98016;98017;98018;98019;98020;98021;98022 98019 8 ETAPGGTESQSLRTNENK Unmodified 1917.9028 0.90281174 3319 Q8N392 ARHGAP18 Rho GTPase-activating protein 18 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 24.158 20.113 3 0.00029628 26705 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 61.265 54.887 18892000 0 18892000 0 0 0 0 0 0 0 0 0 0 0 0 0 14710 3319 13402 123045;123046 98023;98024 98024 2 ETAPVSQPENKPESK Unmodified 1639.8053 0.80532952 694 O95817 BAG3 BAG family molecular chaperone regulator 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 1 1 1 1 1 1 2 2 1 2 2 15.709 15.944 2;3 2.0344E-25 14657 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 129.84 111.09 206000000 0 0 0 5831700 4134300 9464500 7351200 6388000 6655400 16012000 18479000 32185000 14835000 34875000 49792000 14711 694 13403 123047;123048;123049;123050;123051;123052;123053;123054;123055;123056;123057;123058;123059;123060;123061;123062 98025;98026;98027;98028;98029;98030;98031;98032;98033;98034;98035;98036;98037 98029 13 ETAQALK Unmodified 759.41267 0.41266834 5201 Q9Y4G6 TLN2 Talin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 6.9676 7.1082 2 0.026085 5007 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 79.454 0 33906000 0 0 0 0 4351500 0 5645600 6185000 6734300 0 3286100 3067800 2413600 2221600 0 14712 5201 13404 123063;123064;123065;123066;123067;123068;123069;123070 98038;98039;98040;98041;98042 98040 5 ETARPSCEIVDGTR Unmodified 1589.7468 0.74676879 3615 Q92538 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 30.774 30.868 3 0.0020891 33049 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.675 46.262 53334000 0 0 0 0 9780100 0 0 0 9643200 0 0 0 16368000 17543000 0 14713 3615 13405 123071;123072;123073;123074;123075;123076;123077;123078 98043;98044;98045;98046;98047 98046 5 ETAVFINISRGDVVNQDDLYQALASGK Unmodified 2922.4723 0.47231507 4852 Q9UBQ7 GRHPR Glyoxylate reductase/hydroxypyruvate reductase yes yes 0 0 1 By MS/MS 2 0 1 1 95.311 87.18 3 6.9155E-146 112742 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 134.2 119.26 19235000 19235000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14714 4852 13406 123079 98048 98048 1 ETAVNGQGELIPLK Unmodified 1467.7933 0.79330827 2867 Q6BDS2 UHRF1BP1 UHRF1-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 68.485 68.385 2 0.00062182 78540 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 84.507 71.931 27483000 0 0 0 0 9180600 0 0 0 0 0 18302000 0 0 0 0 14715 2867 13407 123080;123081 98049;98050;98051 98049 3 ETAVPGPLGIEDISPNLSPDDK Unmodified 2263.122 0.12197221 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 2 2 2 86.768 86.878 2;3 7.7364E-16 100474 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.81 74.633 32314000 0 0 0 0 0 2014100 0 0 0 0 0 3782200 5870600 6337800 14309000 14716 2203 13408 123082;123083;123084;123085;123086;123087;123088;123089;123090 98052;98053;98054;98055;98056 98052 5 ETCFAEEGK Unmodified 1069.4386 0.4386251 64 CON__P02768-1;P02768 ALB Serum albumin yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 19.449 19.592 2 0.024534 20273 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 118.32 109.4 + 71044000 0 0 0 62915000 0 2912400 0 0 1310000 0 0 0 0 0 3906400 14717 64 13409 123091;123092;123093;123094 98057 98057 0 ETCFAEEGKK Unmodified 1197.5336 0.53358811 64 CON__P02768-1;P02768 ALB Serum albumin yes no 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 12.844 12.974 3 0.01117 12056 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 41.704 32.746 + 26317000 0 0 0 23807000 0 0 0 0 0 0 0 2510000 0 0 0 14718 64 13410 123095;123096 98058;98059 98058 2 ETCSTLAESPR Unmodified 1249.5609 0.5608655 2927 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 23.573 23.735 2 0.017825 24987 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 43.77 29.096 58554000 0 0 0 4539900 3882200 4794300 3531200 4652600 1299900 5128500 3663700 0 9452400 8190900 9418600 14719 2927 13411 123097;123098;123099;123100;123101;123102;123103;123104;123105;123106;123107 98060 98060 1 ETCVDLHLPR Unmodified 1238.6078 0.60775611 1545 P48594 SERPINB4 Serpin B4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 57.183 57.116 3 0.0031009 65778 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 62.303 51.779 75008000 0 0 0 52719000 4786300 7324900 0 0 0 0 0 0 0 4172900 6005200 14720 1545 13412 123108;123109;123110;123111;123112 98061 98061 1 ETDAHLANPVLPDEVLQEAVPGSIR Unmodified 2669.3661 0.36605909 1069 P18074 ERCC2 TFIIH basal transcription factor complex helicase XPD subunit yes yes 0 0 0 By MS/MS 10 0 1 1 88.777 88.921 3 0.0049201 102935 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 24.096 20.821 2679800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2679800 14721 1069 13413 123113 98062 98062 1 ETDCGVHINAGPEIGVASTK Unmodified 2053.9739 0.97386819 2125;588 Q06210;O94808 GFPT1;GFPT2 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1;Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.181 60.286 3 2.9119E-13 68706 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 57.826 52.824 241040000 0 0 0 9485300 10023000 15888000 12838000 13238000 10843000 19723000 28008000 29383000 16245000 24768000 50595000 14722 2125;588 13414 123114;123115;123116;123117;123118;123119;123120;123121;123122;123123;123124;123125 98063;98064;98065;98066;98067;98068;98069;98070 98066 4 ETDCVLTQK Unmodified 1092.5121 0.51212439 1644 P51003 PAPOLA Poly(A) polymerase alpha yes yes 0 0 0 By MS/MS 10 0 1 1 22.821 23.482 2 0.0095702 23609 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.351 40.412 4895700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4895700 14723 1644 13415 123126 98071 98071 1 ETDGSSQIK Unmodified 963.4509 0.45090434 1977 P78347 GTF2I General transcription factor II-I yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 7.8 3.37 1 2 7 1 2 1 1 1 1 1 1 1 6.4061 5.4679 2 0.00767 5500 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.305 43.403 44614000 582730 29951000 0 1409900 0 4056100 0 2129000 3037100 990970 0 0 1162300 0 1294600 14724 1977 13416 123127;123128;123129;123130;123131;123132;123133;123134;123135;123136 98072;98073 98072 2 ETDLLILFK Unmodified 1090.6274 0.62741214 811 P05455 SSB Lupus La protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 92.552 91.473 2 0.010025 106441 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 65.038 43.267 234240000 138290000 58495000 5329200 0 0 1971700 1539900 930290 2441500 2703000 3440800 3203700 2184500 3360600 10353000 14725 811 13417 123137;123138;123139;123140;123141;123142;123143;123144;123145;123146;123147;123148;123149 98074;98075;98076;98077;98078;98079;98080;98081;98082;98083 98074 10 ETDLLRGQLTK Unmodified 1272.7038 0.70376498 2768 Q5T1M5 FKBP15 FK506-binding protein 15 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 5 2 1 2 55.038 49.035 2;3 8.5518E-12 61182 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 157.66 96.753 89770000 16693000 24884000 48193000 0 0 0 0 0 0 0 0 0 0 0 0 14726 2768 13418 123150;123151;123152;123153;123154 98084;98085;98086;98087;98088;98089 98088 5 ETDMLNYLIECFDRVGIEEK Unmodified 2473.1505 0.15051193 623 O95155 UBE4B Ubiquitin conjugation factor E4 B yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 102.33 95.911 3 3.8208E-18 120949 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 105.67 97.679 42904000 34473000 8431500 0 0 0 0 0 0 0 0 0 0 0 0 0 14727 623 13419 123155;123156 98090;98091;98092 98091 3 ETDPDYEDVSVALPNK Unmodified 1790.821 0.82103917 5000 Q9ULM3 YEATS2 YEATS domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 70.141 70.054 2 0.00069565 80539 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 59.57 50.84 36469000 0 0 0 4905100 6847400 8984200 3345500 0 3318700 0 9068500 0 0 0 0 14728 5000 13420 123157;123158;123159;123160;123161;123162 98093;98094;98095;98096;98097;98098 98093 6 ETDREAVATAVQR Unmodified 1444.727 0.72701962 419 O60645 EXOC3 Exocyst complex component 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.663 27.86 3 2.3266E-07 28957 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.745 61.008 162400000 0 0 0 10241000 7583300 17008000 12096000 13721000 6889700 13469000 17228000 21872000 12872000 12847000 16570000 14729 419 13421 123163;123164;123165;123166;123167;123168;123169;123170;123171;123172;123173;123174 98099;98100;98101;98102;98103;98104;98105;98106;98107;98108;98109;98110;98111;98112 98103 13 ETDSSSASAATPSK Unmodified 1337.5947 0.59466805 1741 P54578 USP14 Ubiquitin carboxyl-terminal hydrolase 14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.94 3.58 1 3 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14.18 14.034 2 2.7027E-29 8073 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 135.99 111.15 541550000 297700000 32037000 2140400 6123800 3402900 23586000 8205800 5827100 6944700 16944000 48336000 24115000 11197000 20744000 34243000 14730 1741 13422 123175;123176;123177;123178;123179;123180;123181;123182;123183;123184;123185;123186;123187;123188;123189;123190 98113;98114;98115;98116;98117;98118;98119;98120;98121;98122;98123;98124;98125 98115 13 ETDYPAGEDLSESGQVDK Unmodified 1938.8331 0.83306042 391 O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 47.163 47.472 2 4.5548E-15 53308 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 126.1 109.15 80552000 0 0 0 0 0 4785500 4519900 3144300 4544700 6195900 10957000 11970000 6006900 9693800 18734000 14731 391 13423 123191;123192;123193;123194;123195;123196;123197;123198;123199;123200;123201 98126;98127;98128;98129;98130;98131;98132;98133;98134 98130 9 ETEAVIHK Unmodified 925.4869 0.48689592 3204 Q86Y56 DNAAF5 Dynein assembly factor 5, axonemal yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 2 1 1 1 2 1 1 1 1 1 1 10.583 10.698 2 0.020609 8726 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.659 35.521 67479000 0 0 0 8235600 3257300 4561800 7790600 7097700 4264000 4879400 4214200 9454600 0 4711100 9012200 14732 3204 13424 123202;123203;123204;123205;123206;123207;123208;123209;123210;123211;123212;123213;123214 98135;98136;98137 98135 3 ETEGDVTSVK Unmodified 1063.5033 0.50333384 1641 P50990 CCT8 T-complex protein 1 subunit theta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.28 3.87 2 3 1 12 3 2 1 1 1 1 1 1 1 1 1 1 1 1 1 17.319 16.525 2 0.0015191 16022 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 92.838 52.57 2214800000 235230000 123200000 10117000 73293000 78868000 170700000 119640000 98988000 73961000 133970000 221990000 233870000 168900000 160430000 311660000 14733 1641 13425 123215;123216;123217;123218;123219;123220;123221;123222;123223;123224;123225;123226;123227;123228;123229;123230;123231;123232 98138;98139;98140;98141;98142;98143;98144;98145;98146;98147;98148;98149;98150;98151;98152;98153;98154;98155;98156;98157 98148 14 ETEGTVTCTGAEGR Unmodified 1466.6307 0.63073598 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 17.242 17.426 2 8.4932E-12 16196 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 101.93 97.63 49436000 0 0 0 3291300 4060100 3315800 3152900 3413800 2973300 3033500 4899500 8796300 4402000 3732400 4365000 14734 3443 13426 123233;123234;123235;123236;123237;123238;123239;123240;123241;123242;123243;123244 98158;98159;98160;98161;98162;98163;98164;98165;98166;98167 98160 10 ETELLGSFSK Unmodified 1109.5605 0.56045479 4630 Q9NSV4 DIAPH3 Protein diaphanous homolog 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 63.744 63.071 2 0.00093858 73026 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 111.61 99.462 507360000 0 138710000 0 23482000 23032000 29217000 23794000 26625000 18643000 35819000 31073000 50200000 44646000 29091000 33038000 14735 4630 13427 123245;123246;123247;123248;123249;123250;123251;123252;123253;123254;123255;123256;123257;123258 98168;98169;98170;98171;98172;98173;98174;98175;98176;98177;98178;98179;98180;98181;98182;98183 98182 15 ETELQMQLTESLK Oxidation (M) 1564.7654 0.76543854 2768 Q5T1M5 FKBP15 FK506-binding protein 15 yes yes 0 1 0 By MS/MS 2 0 1 1 78.942 74.206 2 0.0003005 92474 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.756 67.205 25552000 0 25552000 0 0 0 0 0 0 0 0 0 0 0 0 0 14736 2768 13428 123259 98184 98184 4396 1 ETELQMQLTESLK Unmodified 1548.7705 0.77052392 2768 Q5T1M5 FKBP15 FK506-binding protein 15 yes yes 0 0 0 By MS/MS 2 0 1 1 83.685 78.965 2 1.5018E-05 98209 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.25 82.872 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14737 2768 13428 123260 98185 98185 1 ETELSLQK Unmodified 946.49713 0.49712625 2370 Q14134 TRIM29 Tripartite motif-containing protein 29 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.04 32.226 2 0.0042848 35332 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 111.65 62.058 168460000 0 0 0 21512000 9731200 10867000 13602000 17873000 9120600 13023000 14760000 19418000 13564000 10101000 14885000 14738 2370 13429 123261;123262;123263;123264;123265;123266;123267;123268;123269;123270;123271;123272 98186;98187;98188;98189;98190;98191;98192;98193;98194;98195;98196;98197;98198;98199 98195 14 ETEMALAK Unmodified 891.43717 0.43716853 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 25.941 26.231 2 0.020609 27913 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 62.659 19.789 112970000 0 0 0 0 7357400 0 0 6863000 5481000 10733000 12991000 19400000 13658000 13819000 22664000 14739 1226 13430 123273;123274;123275;123276;123277;123278;123279;123280;123281 98200;98201;98202 98201 3 ETENDDLTNVIQK Unmodified 1517.7209 0.72093119 649 O95373 IPO7 Importin-7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 1 2 1 53.366 53.567 2 3.5193E-09 60701 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 132.91 115.48 270160000 0 0 0 25676000 0 21701000 18087000 11812000 0 30288000 26988000 32581000 20721000 26250000 56054000 14740 649 13431 123282;123283;123284;123285;123286;123287;123288;123289;123290;123291;123292;123293;123294 98203;98204;98205;98206;98207;98208;98209;98210;98211;98212;98213;98214;98215 98205 11 ETENDDVTNVIQK Unmodified 1503.7053 0.70528113 282 O15397 IPO8 Importin-8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.2 43.326 2 1.2208E-12 48305 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 147.12 130.1 110970000 0 0 0 7584600 8623400 14068000 0 6878900 0 10990000 13316000 0 16960000 10333000 22213000 14741 282 13432 123295;123296;123297;123298;123299;123300;123301;123302;123303;123304;123305;123306 98216;98217;98218;98219;98220;98221;98222;98223;98224;98225;98226;98227 98217 12 ETENNQMTSESGATAGR Unmodified 1781.7486 0.74861928 301 O43164 PJA2 E3 ubiquitin-protein ligase Praja-2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 18.789 19.09 2 0.004393 18172 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 41.54 35.3 4970200 0 0 0 0 0 0 0 0 0 0 0 0 0 4970200 0 14742 301 13433 123307;123308 98228;98229 98228 2 ETENTAYK Unmodified 954.42944 0.42944062 2734 Q5JSH3 WDR44 WD repeat-containing protein 44 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 7.4926 4.1135 2 0.041598 7569 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.998 41.486 17056000 9111800 7944500 0 0 0 0 0 0 0 0 0 0 0 0 0 14743 2734 13434 123309;123310 98230 98230 1 ETEPTVTTSDAAVDLSSFK Unmodified 1996.9477 0.94769624 568 O75970 MPDZ Multiple PDZ domain protein yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 77.701 77.862 2 0.00067158 90018 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 49.188 26.654 67426000 0 0 0 0 0 0 0 0 5252600 14215000 9865900 10636000 8490900 8472000 10494000 14744 568 13435 123311;123312;123313;123314;123315;123316;123317;123318 98231;98232;98233;98234 98234 4 ETEQDRPSQNNTIGLVGQTDAPEVTREELK Unmodified 3353.6335 0.63351975 4328 Q9H0H0 INTS2 Integrator complex subunit 2 yes yes 0 0 2 By MS/MS 2 0 1 1 72.485 69.401 4 1.5214E-11 84968 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 57.688 49.142 8205300 0 0 8205300 0 0 0 0 0 0 0 0 0 0 0 0 14745 4328 13436 123319 98235 98235 1 ETEQINGNPVPDENGHIPGWVPVEK Unmodified 2754.3249 0.32492255 3373 Q8N999 C12orf29 Uncharacterized protein C12orf29 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 80.554 77.222 3 3.9259E-08 96398 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 49.871 42.511 9209600 0 9209600 0 0 0 0 0 0 0 0 0 0 0 0 0 14746 3373 13437 123320;123321 98236;98237 98236 2 ETEQLEIK Unmodified 988.50769 0.50769094 4079 Q9BPX3 NCAPG Condensin complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33.919 33.257 2 0.0044578 36964 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 112.37 63.011 288890000 13482000 65896000 0 10598000 8308000 17343000 10398000 8543200 8706200 19590000 25784000 31977000 19733000 14016000 34520000 14747 4079 13438 123322;123323;123324;123325;123326;123327;123328;123329;123330;123331;123332;123333;123334;123335 98238;98239;98240;98241;98242;98243;98244;98245;98246;98247;98248;98249;98250 98238 11 ETEQMQRYNQR Unmodified 1481.6681 0.66812453 4365 Q9H2G2 SLK STE20-like serine/threonine-protein kinase yes yes 0 0 1 By MS/MS 2 0 1 1 15.633 13.29 3 0.020918 16706 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 39.148 31.778 4785300 0 0 4785300 0 0 0 0 0 0 0 0 0 0 0 0 14748 4365 13439 123336 98251 98251 1 ETEQNYEAEIHCLQK Unmodified 1890.8418 0.84179138 4077 Q99996 AKAP9 A-kinase anchor protein 9 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 60.391 55.043 3 0.021857 67543 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 32.53 30.168 38436000 0 38436000 0 0 0 0 0 0 0 0 0 0 0 0 0 14749 4077 13440 123337;123338 98252 98252 1 ETERASPIK Unmodified 1029.5455 0.54547343 1226 P27816 MAP4 Microtubule-associated protein 4 yes no 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 4 1 1 2 11.972 9.0339 2 0.0024297 12204 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 125.82 59.135 278960000 6350900 218270000 54345000 0 0 0 0 0 0 0 0 0 0 0 0 14750 1226 13441 123339;123340;123341;123342 98253;98254 98254 1 ETERFVSEMLQK Unmodified 1495.7341 0.73407884 5118 Q9Y2T3 GDA Guanine deaminase yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 68.189 64.466 2;3 0.01532 79912 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 49.632 36.042 17030000 0 0 17030000 0 0 0 0 0 0 0 0 0 0 0 0 14751 5118 13442 123343;123344 98255;98256;98257 98257 3 ETERFVSEMLQK Oxidation (M) 1511.729 0.72899346 5118 Q9Y2T3 GDA Guanine deaminase yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 45.864 40.122 3 0.0053782 55683 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.235 44.616 64628000 15568000 0 49060000 0 0 0 0 0 0 0 0 0 0 0 0 14752 5118 13442 123345;123346 98258;98259 98258 6506 2 ETESAPGSPR Unmodified 1029.4727 0.47270242 2961 Q6PKG0 LARP1 La-related protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 9.7469 9.8833 2 0.0088751 8410 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 58.981 37.453 30875000 0 0 0 1865500 1997800 2567400 3330000 2000100 1648300 2818700 892070 3675400 3567300 3081000 3431100 14753 2961 13443 123347;123348;123349;123350;123351;123352;123353;123354;123355;123356;123357;123358 98260;98261;98262;98263;98264;98265 98260 6 ETESEAEDNLDDLEK Unmodified 1735.7272 0.72719836 3279 Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.207 52.354 2 6.0867E-35 58965 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 172.11 169.84 116230000 0 0 0 5463000 5169000 9120700 8112000 7478600 8827900 11509000 14302000 12951000 11560000 8329600 13407000 14754 3279 13444 123359;123360;123361;123362;123363;123364;123365;123366;123367;123368;123369;123370 98266;98267;98268;98269;98270;98271;98272;98273;98274;98275;98276;98277 98271 12 ETEVGDPAGNELAEPEAK Unmodified 1854.8483 0.84831655 3848 Q96G46 DUS3L tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like yes yes 0 0 0 By MS/MS 10 0 1 1 49.052 49.775 2 0.00020107 55301 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.157 51.203 8854500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8854500 14755 3848 13445 123371 98278 98278 1 ETEYQALQETNMK Unmodified 1583.7137 0.71373732 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 2 1 1 1 1 1 1 50.257 50.59 2 2.8951E-15 57241 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 154.24 140.01 128570000 0 0 0 0 11456000 0 0 0 0 0 42365000 41787000 0 0 32957000 14756 2556 13446 123372;123373;123374;123375;123376;123377;123378;123379 98279;98280;98281;98282;98283;98284;98285 98283 7 ETEYQALQETNMK Oxidation (M) 1599.7087 0.70865195 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 38.957 39.335 2 3.0345E-20 43625 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 156.57 136.27 67621000 0 0 0 0 0 0 0 0 8958500 0 0 18357000 26924000 13380000 0 14757 2556 13446 123380;123381;123382;123383;123384;123385 98286;98287;98288;98289;98290;98291 98289 4195 6 ETFDPEK Unmodified 864.38651 0.38651317 1721 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.087 22.294 2 0.034771 22229 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.134 51.571 462850000 0 0 0 22758000 18373000 35397000 24317000 28583000 26359000 53081000 52784000 58227000 47947000 45536000 49484000 14758 1721 13447 123386;123387;123388;123389;123390;123391;123392;123393;123394;123395;123396;123397 98292 98292 1 ETFEDSNLIPK Unmodified 1291.6296 0.62959699 864 P08243 ASNS Asparagine synthetase [glutamine-hydrolyzing] yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 67.591 67.805 2 0.034078 77894 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 56.432 41.758 98315000 0 0 0 0 0 13286000 6775300 4979700 6457500 12789000 10582000 11321000 7811200 7867700 16446000 14759 864 13448 123398;123399;123400;123401;123402;123403;123404;123405;123406;123407 98293 98293 0 ETFGVNNAVYGIDAMNPSSRDDFTEFGK Oxidation (M) 3096.3771 0.37709406 547 O75822 EIF3J Eukaryotic translation initiation factor 3 subunit J yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS 4 3.46 3 1 1 1 1 1 84.985 81.19 3 1.1089E-55 102472 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 113.93 107.63 161510000 37426000 86826000 23435000 0 0 0 0 0 0 0 0 0 0 0 13823000 14760 547 13449 123408;123409;123410;123411 98294;98295;98296;98297 98297 708 4 ETFGVNNAVYGIDAMNPSSRDDFTEFGK Unmodified 3080.3822 0.38217943 547 O75822 EIF3J Eukaryotic translation initiation factor 3 subunit J yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 90.488 85.814 3 8.5973E-146 107800 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 163.32 156.83 166100000 57271000 83243000 25586000 0 0 0 0 0 0 0 0 0 0 0 0 14761 547 13449 123412;123413;123414;123415 98298;98299;98300;98301;98302;98303;98304 98299 7 ETFIDSGVMSAIK Oxidation (M) 1412.6857 0.68573166 3993 Q96ST2 IWS1 Protein IWS1 homolog yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 4 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 69.787 68.792 2 2.5706E-06 86180 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.79 95.014 307160000 0 139210000 4829300 8340000 11620000 11114000 12163000 9449500 8203700 18490000 20290000 20880000 15429000 10923000 16215000 14762 3993 13450 123416;123417;123418;123419;123420;123421;123422;123423;123424;123425;123426;123427;123428;123429;123430;123431 98305;98306;98307;98308;98309;98310;98311;98312;98313;98314;98315;98316;98317;98318 98308 5470 14 ETFIDSGVMSAIK Unmodified 1396.6908 0.69081704 3993 Q96ST2 IWS1 Protein IWS1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 81.675 81.026 2 0.00078701 93822 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 89.171 74.498 676370000 0 435900000 5698400 7320700 11061000 17832000 11334000 15059000 12048000 17711000 28658000 38992000 16251000 18141000 40370000 14763 3993 13450 123432;123433;123434;123435;123436;123437;123438;123439;123440;123441;123442;123443;123444;123445;123446 98319;98320;98321;98322;98323;98324;98325;98326;98327;98328;98329;98330;98331;98332;98333 98320 14 ETFLSADER Unmodified 1066.4931 0.49310351 4024 Q99570 PIK3R4 Phosphoinositide 3-kinase regulatory subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 41.969 42.043 2 0.029817 47514 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 48.423 34.5 61612000 0 0 0 6362100 6571100 8836000 0 0 5300400 0 0 0 10845000 9776900 13920000 14764 4024 13451 123447;123448;123449;123450;123451;123452;123453 98334 98334 1 ETFLTSPEELYR Unmodified 1483.7195 0.71947463 661 O95433 AHSA1 Activator of 90 kDa heat shock protein ATPase homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.428 78.485 2 0.00057079 90171 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.655 63.389 548280000 0 0 0 18409000 15885000 69403000 28226000 33032000 23104000 71395000 42217000 51130000 34156000 43221000 118100000 14765 661 13452 123454;123455;123456;123457;123458;123459;123460;123461;123462;123463;123464;123465 98335;98336;98337;98338;98339;98340;98341;98342;98343;98344 98338 10 ETFSLAEFCEEEEEEK Unmodified 2004.8146 0.81463316 4616 Q9NRY5 FAM114A2 Protein FAM114A2 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 83.642 80.157 2 0.0060886 95943 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 55.314 43.731 22331000 0 21141000 1190000 0 0 0 0 0 0 0 0 0 0 0 0 14766 4616 13453 123466;123467;123468 98345;98346 98346 2 ETGDPGGQLVLAGDPR Unmodified 1580.7794 0.77944912 4513 Q9HCE1 MOV10 Putative helicase MOV-10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 59.518 59.7 2 0.0023074 67176 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 56.139 40.568 51074000 0 0 0 0 3747800 3140600 2564100 3198300 2711800 4307600 5768500 8001300 5842000 4630100 7161900 14767 4513 13454 123469;123470;123471;123472;123473;123474;123475;123476;123477;123478;123479 98347;98348;98349;98350;98351;98352;98353;98354;98355;98356 98353 10 ETGEHLVHVK Unmodified 1147.5986 0.59857163 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.26 3.72 1 7 4 22 5 4 3 1 1 2 2 2 2 1 2 2 3 2 2 21.837 20.845 2;3 1.512E-12 15750 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 153.08 117.79 4148700000 2226500000 403480000 928480000 14892000 17918000 36951000 29159000 28871000 17603000 40538000 59160000 108020000 59872000 58345000 118940000 14768 1124 13455 123480;123481;123482;123483;123484;123485;123486;123487;123488;123489;123490;123491;123492;123493;123494;123495;123496;123497;123498;123499;123500;123501;123502;123503;123504;123505;123506;123507;123508;123509;123510;123511;123512;123513 98357;98358;98359;98360;98361;98362;98363;98364;98365;98366;98367;98368;98369;98370;98371;98372;98373;98374;98375;98376;98377;98378;98379 98364 13 ETGEPYR Unmodified 850.3821 0.38209649 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 10.064 10.219 2 0.025177 8531 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 81.297 28.614 54295000 0 0 0 0 0 7248300 7206600 7757800 6189300 5601600 0 0 7082700 5777800 7431200 14769 2102 13456 123514;123515;123516;123517;123518;123519;123520;123521 98380 98380 1 ETGFHLTTTNQGASAAGPGFSLK Unmodified 2291.1182 0.11822424 1118;5069 P21127;Q9UQ88 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 75.095 75.207 3 1.3664E-13 86298 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.99 69.113 82087000 0 0 0 0 2573000 8061400 3478200 4911600 8013800 9729800 7668600 8527000 4985300 5169500 18969000 14770 1118;5069 13457 123522;123523;123524;123525;123526;123527;123528;123529;123530;123531;123532 98381;98382;98383;98384;98385;98386;98387;98388;98389;98390 98384 10 ETGHTNFGEV Unmodified 1089.4727 0.47270242 2821 Q5VVQ6 YOD1 Ubiquitin thioesterase OTU1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 38.203 33.404 2 0.02366 43524 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.338 56.556 77682000 0 77682000 0 0 0 0 0 0 0 0 0 0 0 0 0 14771 2821 13458 123533;123534 98391 98391 1 ETGHVSGPDGQNPEK Unmodified 1550.6961 0.69611342 4669 Q9NVI1 FANCI Fanconi anemia group I protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.32 2.16 1 1 20 2 2 2 2 1 2 1 2 2 2 2 2 12.279 12.082 2;3 7.0238E-31 14975 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.495 86.993 421080000 0 221700000 0 14050000 18479000 24769000 1633700 16401000 1106400 24459000 0 20804000 20458000 23907000 33310000 14772 4669 13459 123535;123536;123537;123538;123539;123540;123541;123542;123543;123544;123545;123546;123547;123548;123549;123550;123551;123552;123553;123554;123555;123556 98392;98393;98394;98395;98396;98397;98398 98394 6 ETGMESVIEAVAHFK Unmodified 1646.7974 0.79740737 3247 Q8IWV8 UBR2 E3 ubiquitin-protein ligase UBR2 yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 97.408 91.704 3 0.00058445 116151 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.285 63.107 19054000 16816000 2238300 0 0 0 0 0 0 0 0 0 0 0 0 0 14773 3247 13460 123557;123558 98399;98400 98400 2 ETGNHYAMK Unmodified 1049.46 0.46002924 1056 P17612 PRKACA cAMP-dependent protein kinase catalytic subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 10.518 7.3905 2 0.0053335 9842 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.12 82.591 53873000 5880400 44189000 3803100 0 0 0 0 0 0 0 0 0 0 0 0 14774 1056 13461 123559;123560;123561 98401 98401 1 ETGNHYAMK Oxidation (M) 1065.4549 0.45494386 1056 P17612 PRKACA cAMP-dependent protein kinase catalytic subunit alpha yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 5.5441 2.2433 2 0.02207 3691 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 70.525 49.826 108610000 0 108610000 0 0 0 0 0 0 0 0 0 0 0 0 0 14775 1056 13461 123562;123563 98402 98402 1 ETGQEHELIESMPLLEWFANNYK Unmodified 2777.3007 0.30068164 1902 P62495 ETF1 Eukaryotic peptide chain release factor subunit 1 yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 101.11 95.338 3 1.3942E-56 120422 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 131.98 126.21 26403000 23210000 3193100 0 0 0 0 0 0 0 0 0 0 0 0 0 14776 1902 13462 123564;123565 98403;98404;98405;98406 98406 4 ETGQQIGDEVRALHDTGK Unmodified 1952.9552 0.95518166 4307 Q9GZT9 EGLN1 Egl nine homolog 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 56.938 52.084 3 0.00010724 64911 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 69.605 59.856 44696000 0 36779000 7916900 0 0 0 0 0 0 0 0 0 0 0 0 14777 4307 13463 123566;123567 98407 98407 1 ETGSISAPSECFR Unmodified 1439.6351 0.63509307 5073 Q9UQR0 SCML2 Sex comb on midleg-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.116 49.204 2 0.00031198 55575 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 81.771 70.941 105710000 0 0 0 7720000 8468800 14315000 9309500 9590700 0 11445000 16398000 16012000 12455000 0 0 14778 5073 13464 123568;123569;123570;123571;123572;123573;123574;123575;123576;123577;123578;123579 98408;98409;98410;98411;98412;98413;98414;98415;98416;98417;98418;98419 98414 12 ETGTPISMK Unmodified 962.47428 0.47428232 895 P09884 POLA1 DNA polymerase alpha catalytic subunit yes yes 0 0 0 By MS/MS 10 0 1 1 30.595 31.306 2 0.029817 33531 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.423 28.909 11158000 0 0 0 0 0 0 0 0 0 0 0 11158000 0 0 0 14779 895 13465 123580 98420 98420 1 ETGVHSLLIDPLTQR Unmodified 1677.905 0.90498399 3134 Q86TC9 MYPN Myopalladin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.483 79.543 3 5.4897E-27 91455 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 128.96 122.23 331960000 0 0 0 9151800 10387000 31564000 13595000 30124000 25397000 43094000 24468000 24414000 24930000 29188000 65649000 14780 3134 13466 123581;123582;123583;123584;123585;123586;123587;123588;123589;123590;123591;123592 98421;98422;98423;98424;98425;98426;98427;98428;98429;98430 98423 10 ETGVPIAGR Unmodified 898.48723 0.48723027 953 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 30.638 30.875 2 0.005209 32245 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.229 51.08 602890000 0 0 0 0 25860000 54347000 48958000 40099000 44636000 58466000 58996000 76216000 47692000 50067000 97555000 14781 953 13467 123593;123594;123595;123596;123597;123598;123599;123600;123601;123602;123603 98431;98432;98433;98434;98435;98436;98437;98438;98439;98440;98441 98435 11 ETGWASFSEFTSSLSTK Unmodified 1863.8527 0.85267365 2727 Q5H9R7 PPP6R3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 93.553 89.49 2 3.0863E-26 111245 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.03 108.4 18361000 0 18361000 0 0 0 0 0 0 0 0 0 0 0 0 0 14782 2727 13468 123604;123605 98442 98442 1 ETGYTYILPK Unmodified 1183.6125 0.61249036 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.063 66.147 2 0.022318 75639 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 46.158 37.837 261700000 0 0 0 11370000 13169000 19934000 13483000 17659000 14944000 20830000 27337000 32523000 24221000 24686000 41547000 14783 2930 13469 123606;123607;123608;123609;123610;123611;123612;123613;123614;123615;123616;123617 98443 98443 1 ETGYVVERPSTTK Unmodified 1465.7413 0.7412727 4742 Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 2 2 2 1 2 1 2 2 1 1 28.692 28.849 2;3 2.4809E-10 31218 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 125.24 97.228 309800000 0 0 0 19364000 22470000 20312000 22671000 21061000 25498000 12014000 0 55084000 57736000 42669000 10919000 14784 4742 13470 123618;123619;123620;123621;123622;123623;123624;123625;123626;123627;123628;123629;123630;123631;123632;123633;123634 98444;98445;98446;98447;98448;98449;98450;98451 98449 7 ETHADLWPAK Unmodified 1166.572 0.57202253 1358 P35606 COPB2 Coatomer subunit beta' yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.65 3.65 5 12 1 2 2 1 1 1 1 1 1 1 1 1 2 1 43.778 42.366 2;3 0.0026032 56798 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 63.076 39.756 610970000 17132000 245000000 62412000 2490500 0 19397000 16163000 15186000 15839000 27383000 29464000 46309000 23895000 40333000 49965000 14785 1358 13471 123635;123636;123637;123638;123639;123640;123641;123642;123643;123644;123645;123646;123647;123648;123649;123650;123651 98452;98453;98454;98455;98456;98457;98458;98459;98460;98461;98462;98463;98464 98455 12 ETHASAPVK Unmodified 938.48214 0.48214489 1702 P52789 HK2 Hexokinase-2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 7.1373 4.407 2 8.1568E-11 6439 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 187 127.8 274710000 0 266760000 7949300 0 0 0 0 0 0 0 0 0 0 0 0 14786 1702 13472 123652;123653 98465;98466 98465 2 ETHSIGRD Unmodified 913.42536 0.42535829 4341 Q9H0W9 C11orf54 Ester hydrolase C11orf54 yes yes 0 0 1 By MS/MS By matching 2 0 2 1 1 6.1431 3.4128 2 0.043371 5250 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.25 60.638 179690000 0 85768000 93923000 0 0 0 0 0 0 0 0 0 0 0 0 14787 4341 13473 123654;123655 98467 98467 1 ETHVMDYR Unmodified 1049.46 0.46002924 4987 Q9UL46 PSME2 Proteasome activator complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 21.384 21.614 2 0.011634 21938 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.478 32.031 66955000 0 0 0 7998100 0 16828000 0 7028600 0 0 20529000 14571000 0 0 0 14788 4987 13474 123656;123657;123658;123659;123660 98468;98469;98470 98469 3 ETICRVTGGMK Unmodified 1250.6111 0.61112693 1883 P62263 RPS14 40S ribosomal protein S14 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 6 2 2 2 33.299 28.596 2;3 5.8008E-22 40003 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 187.99 123.57 633610000 512000000 83862000 37757000 0 0 0 0 0 0 0 0 0 0 0 0 14789 1883 13475 123661;123662;123663;123664;123665;123666 98471;98472;98473;98474 98473 4 ETICRVTGGMK Oxidation (M) 1266.606 0.60604155 1883 P62263 RPS14 40S ribosomal protein S14 yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 20.433 16.724 2 1.7242E-07 24136 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 140.49 97.887 99037000 72029000 0 27008000 0 0 0 0 0 0 0 0 0 0 0 0 14790 1883 13475 123667;123668 98475 98475 3058 0 ETIDAVPNAIPGR Unmodified 1351.7096 0.70957864 352 O43670 ZNF207 BUB3-interacting and GLEBS motif-containing protein ZNF207 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.317 63.367 2 8.0676E-08 72303 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 121.73 101.11 348680000 0 0 0 27108000 24275000 26629000 29426000 22589000 18725000 30034000 46449000 38408000 27885000 57147000 0 14791 352 13476 123669;123670;123671;123672;123673;123674;123675;123676;123677;123678;123679;123680 98476;98477;98478;98479;98480;98481;98482;98483;98484;98485;98486;98487;98488;98489;98490;98491;98492 98480 17 ETIDAVPNAIPGRTDIELEIYGMEGIPEK Oxidation (M) 3185.5802 0.58021054 352 O43670 ZNF207 BUB3-interacting and GLEBS motif-containing protein ZNF207 yes yes 0 1 1 By MS/MS 2 0 1 1 91.979 83.849 3 1.8559E-07 108613 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.695 36.084 34191000 34191000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14792 352 13477 123681 98493 98493 438 1 ETIDAVPNAIPGRTDIELEIYGMEGIPEK Unmodified 3169.5853 0.58529592 352 O43670 ZNF207 BUB3-interacting and GLEBS motif-containing protein ZNF207 yes yes 0 0 1 By MS/MS 2 0 1 1 96.146 88.015 3 1.3295E-08 113689 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.541 49.436 79692000 79692000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14793 352 13477 123682 98494 98494 1 ETIDLLAFTSVAELELLGLEK Unmodified 2303.2512 0.25119547 2890 Q6IQ49 SDE2 Protein SDE2 homolog yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 105.14 100.94 3 0.0035809 124856 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 33.676 25.872 4206700 1157800 3049000 0 0 0 0 0 0 0 0 0 0 0 0 0 14794 2890 13478 123683;123684 98495;98496 98495 2 ETIDNNSVSSPLQSLQQR Unmodified 2014.992 0.99196109 1809 P60228 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 2 2 2 1 1 1 2 2 1 1 2 2 71.205 71.248 2;3 3.2666E-47 81282 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 155.02 141.11 136390000 0 0 0 6834500 10459000 9310700 4280300 5741200 2262200 18092000 19021000 13461000 7700800 14552000 24676000 14795 1809 13479 123685;123686;123687;123688;123689;123690;123691;123692;123693;123694;123695;123696;123697;123698;123699;123700;123701;123702;123703 98497;98498;98499;98500;98501;98502;98503;98504;98505;98506;98507;98508;98509 98500 11 ETIEDVEEMLNNLPGVTSVHSR Unmodified 2468.1853 0.18531753 5036 Q9UNM6 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes yes 0 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 1 3 98.04 92.813 3 0.0022839 115738 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 37.458 31 134480000 65244000 69233000 0 0 0 0 0 0 0 0 0 0 0 0 0 14796 5036 13480 123704;123705;123706;123707 98510;98511;98512;98513 98510 3 ETIEIIDLAK Unmodified 1143.6387 0.63870511 3101 Q7Z4S6 KIF21A Kinesin-like protein KIF21A yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 81.334 80.142 2 0.03164 92932 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 87.308 46.279 236370000 16245000 52182000 0 6471300 6438400 14050000 9062300 9398700 12135000 20503000 17428000 22146000 11037000 13405000 25869000 14797 3101 13481 123708;123709;123710;123711;123712;123713;123714;123715;123716;123717;123718;123719;123720;123721;123722;123723 98514;98515;98516;98517;98518;98519;98520;98521;98522;98523 98521 2 ETIEILFSEGLIK Unmodified 1490.8232 0.82321142 1451 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 97.389 91.572 2 7.5172E-18 115897 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 153.12 138.18 27262000 27262000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14798 1451 13482 123724;123725 98524;98525 98525 2 ETIELSPTGRPK Unmodified 1326.7143 0.71432967 4617 Q9NRZ9 HELLS Lymphoid-specific helicase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.65 1.63 1 22 1 2 2 2 2 1 2 1 2 2 2 2 2 39.409 39.421 2;3 0.022547 43553 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 74.841 49.267 315330000 0 0 7702100 17710000 16014000 28906000 23365000 18934000 22502000 8533500 43433000 36303000 28616000 27445000 35862000 14799 4617 13483 123726;123727;123728;123729;123730;123731;123732;123733;123734;123735;123736;123737;123738;123739;123740;123741;123742;123743;123744;123745;123746;123747;123748 98526;98527;98528;98529;98530 98527 2 ETIEQEK Unmodified 875.42363 0.42362696 1953;1896 P62328;CON__P21752;P63313 TMSB4X;TMSB10 Thymosin beta-4;Hematopoietic system regulatory peptide;Thymosin beta-10 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 5.78 3.79 3 2 4 2 3 1 1 1 1 8.1187 6.3135 2 0.02234 7704 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.43 40.395 + 5148200000 2837800000 2259000000 0 0 0 0 0 0 0 6173100 15650000 4670800 0 0 24840000 14800 1896;1953 13484 123749;123750;123751;123752;123753;123754;123755;123756;123757 98531;98532;98533;98534;98535;98536;98537;98538;98539;98540 98532 10 ETIGVGSYSECK Unmodified 1328.5918 0.59183127 2531 Q15418 RPS6KA1 Ribosomal protein S6 kinase alpha-1 yes yes 0 0 0 By MS/MS 2 0 1 1 44.234 39.015 2 3.1007E-14 50515 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.16 121.38 65971000 0 65971000 0 0 0 0 0 0 0 0 0 0 0 0 0 14801 2531 13485 123758 98541 98541 1 ETIIAFAWEPNGSK Unmodified 1561.7777 0.77765821 1776 P55884 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 0 0 0 By MS/MS 2 0 1 1 91.263 83.132 2 0.00046486 107869 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 120.77 96.681 15947000 15947000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14802 1776 13486 123759 98542 98542 1 ETIIEELNTK Unmodified 1188.6238 0.62378333 4077 Q99996 AKAP9 A-kinase anchor protein 9 yes yes 0 0 0 By MS/MS 3 0 1 1 72.421 67.894 2 0.031373 82753 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 58.433 32.859 2379400 0 2379400 0 0 0 0 0 0 0 0 0 0 0 0 0 14803 4077 13487 123760 98543 98543 1 ETILSQK Unmodified 817.45453 0.45453316 2584 Q15818 NPTX1 Neuronal pentraxin-1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 24.835 20.747 2 0.023276 27231 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.2 21.824 86683000 0 86683000 0 0 0 0 0 0 0 0 0 0 0 0 0 14804 2584 13488 123761;123762 98544;98545 98544 2 ETIMNQEK Oxidation (M) 1007.4594 0.45936054 1102 P20290 BTF3 Transcription factor BTF3 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.28 3.39 3 2 1 23 3 3 2 2 2 2 2 1 2 2 2 2 2 2 17.211 17.352 2 0.00013238 4957 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 153.73 116.63 919850000 124240000 248330000 0 20652000 27822000 32600000 39637000 32638000 12307000 67875000 96890000 64955000 42713000 32180000 77018000 14805 1102 13489 123763;123764;123765;123766;123767;123768;123769;123770;123771;123772;123773;123774;123775;123776;123777;123778;123779;123780;123781;123782;123783;123784;123785;123786;123787;123788;123789;123790;123791 98546;98547;98548;98549;98550;98551;98552;98553;98554;98555;98556;98557;98558;98559;98560;98561;98562;98563;98564;98565;98566;98567 98565 1584 18 ETIMNQEK Unmodified 991.46445 0.46444592 1102 P20290 BTF3 Transcription factor BTF3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 16.527 15.774 2 0.002399 18625 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 126.28 71.491 2938900000 78805000 1909600000 2095700 31139000 32841000 44608000 52877000 44842000 37217000 65791000 155770000 101790000 70912000 103760000 206890000 14806 1102 13489 123792;123793;123794;123795;123796;123797;123798;123799;123800;123801;123802;123803;123804;123805;123806;123807 98568;98569;98570;98571;98572;98573;98574;98575;98576;98577;98578;98579;98580;98581;98582;98583;98584;98585;98586;98587;98588 98577 21 ETINNLDTSSSDFTILQEIEEPSLEPENEK Unmodified 3420.5944 0.59439986 2532 Q15424 SAFB Scaffold attachment factor B1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 96.681 93.172 3 3.4833E-78 111659 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 124.03 122.3 114470000 0 111760000 2705500 0 0 0 0 0 0 0 0 0 0 0 0 14807 2532 13490 123808;123809;123810 98589;98590;98591 98590 3 ETIPDIDPNAK Unmodified 1211.6034 0.60338224 1721 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 2 1 1 1 1 1 1 1 1 1 1 55.499 54.454 2 0.00042521 61910 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 85.744 61.589 650640000 38948000 124180000 0 0 0 55327000 59505000 0 38723000 56917000 64360000 59580000 45085000 48435000 59579000 14808 1721 13491 123811;123812;123813;123814;123815;123816;123817;123818;123819;123820;123821;123822;123823;123824 98592;98593;98594;98595;98596;98597;98598;98599;98600;98601;98602;98603;98604;98605;98606;98607;98608;98609;98610 98603 18 ETIPEETASSTAHLWEK Unmodified 1927.9163 0.91633654 3970 Q96RL7 VPS13A Vacuolar protein sorting-associated protein 13A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.42 1.93 1 11 1 1 1 1 1 1 1 1 1 1 1 1 69.635 69.459 3 0.00013767 79112 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.788 51.005 56269000 0 2704900 0 0 2026900 3446200 1895100 4777700 4238300 4300100 6613900 8689400 4825000 5291100 7459900 14809 3970 13492 123825;123826;123827;123828;123829;123830;123831;123832;123833;123834;123835;123836 98611;98612;98613;98614;98615;98616;98617 98613 7 ETIPLQETSLYTQDR Unmodified 1792.8843 0.88430813 1639 P50897 PPT1 Palmitoyl-protein thioesterase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 73.606 73.714 2 0.003027 85484 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 61.235 42.136 97843000 0 0 0 8459500 0 7026200 7945400 8034200 7333200 7900500 16964000 12155000 0 8518800 13507000 14810 1639 13493 123837;123838;123839;123840;123841;123842;123843;123844;123845;123846 98618;98619;98620;98621;98622;98623 98623 3 ETIPLQETSLYTQDRLGLK Unmodified 2204.1689 0.16886283 1639 P50897 PPT1 Palmitoyl-protein thioesterase 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 84.458 80.84 3 8.5894E-06 100647 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.057 56.036 56240000 0 47859000 8381000 0 0 0 0 0 0 0 0 0 0 0 0 14811 1639 13494 123847;123848 98624;98625 98624 2 ETIQNLSR Unmodified 959.50361 0.50360861 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 26.86 27.106 2 0.011957 28966 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 75.738 6.5404 51807000 0 0 0 0 5831400 5939400 0 6431500 5649500 0 0 7734300 7692000 4584600 7944500 14812 2556 13495 123849;123850;123851;123852;123853;123854;123855;123856 98626;98627 98627 2 ETIRELTAK Unmodified 1059.5924 0.59242362 2584 Q15818 NPTX1 Neuronal pentraxin-1 yes yes 0 0 1 By MS/MS 2 0 1 1 36.528 30.099 2 0.039588 42147 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.48 40.919 23748000 23748000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14813 2584 13496 123857 98628 98628 1 ETISQATSEK Unmodified 1092.5299 0.52988294 3233 Q8IW35 CEP97 Centrosomal protein of 97 kDa yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 16.631 16.434 2 0.00076616 16145 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 120.15 87.8 62243000 0 9876700 0 0 3053100 7266100 3387300 0 0 5762000 6694000 7958900 0 7096500 11148000 14814 3233 13497 123858;123859;123860;123861;123862;123863;123864;123865;123866 98629;98630;98631;98632;98633;98634;98635;98636 98636 3 ETISTANKANAER Unmodified 1403.7005 0.70047052 4502 Q9HBM1 SPC25 Kinetochore protein Spc25 yes yes 0 0 1 By MS/MS 2 0 1 1 63.314 59.555 2 2.6508E-07 74034 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 108.98 81.863 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14815 4502 13498 123867 98637 98637 1 ETITESAGR Unmodified 962.46689 0.46688876 5012 Q9UM00 TMCO1 Transmembrane and coiled-coil domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 14.716 14.866 2 0.012256 14222 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 61.582 26.333 70913000 0 0 0 12067000 6902900 0 6128200 0 0 0 0 13965000 12326000 9759200 9765000 14816 5012 13499 123868;123869;123870;123871;123872;123873;123874 98638;98639;98640;98641;98642 98640 5 ETIVEVGSDLPDSGK Unmodified 1544.757 0.75698235 4254 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 65.311 65.39 2 0.0014014 74019 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 68.676 51.24 9834600 0 0 0 0 2699200 0 0 0 0 0 0 0 0 2576000 4559500 14817 4254 13500 123875;123876;123877 98643;98644 98644 2 ETKEEEEAERSER Unmodified 1620.7227 0.72272211 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 7.4464 7.601 3 0.0088569 5647 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 65.563 52.426 41630000 0 0 0 0 2407500 1515700 0 5137100 1535100 4869400 13775000 0 0 5197100 7193400 14818 619 13501 123878;123879;123880;123881;123882;123883;123884;123885 98645;98646;98647 98646 3 ETKEVQTNELK Unmodified 1317.6776 0.67760981 334 O43491 EPB41L2 Band 4.1-like protein 2 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 10.533 10.612 3 0.025387 9205 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 42.001 12.194 2848000 0 0 0 0 0 0 2076100 771900 0 0 0 0 0 0 0 14819 334 13502 123886;123887 98648 98648 0 ETKPEPMEEDLPENK Oxidation (M) 1800.8088 0.80875992 1313 P31948 STIP1 Stress-induced-phosphoprotein 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 1 4 1 33.103 28.504 2;3 9.1649E-21 37235 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.02 111.7 265640000 18796000 245470000 1372000 0 0 0 0 0 0 0 0 0 0 0 0 14820 1313 13503 123888;123889;123890;123891;123892;123893 98649;98650;98651 98649 1957 2 ETKPEPMEEDLPENK Unmodified 1784.8138 0.8138453 1313 P31948 STIP1 Stress-induced-phosphoprotein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.71 3.81 2 1 4 1 2 1 1 1 1 43.138 40.452 3 2.6027E-45 49853 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 119.17 111.58 324620000 35516000 233750000 0 0 0 0 0 0 0 0 12690000 0 0 8158600 34503000 14821 1313 13503 123894;123895;123896;123897;123898;123899;123900 98652;98653;98654;98655;98656;98657;98658;98659 98655 8 ETKPEPMEEDLPENKK Oxidation (M) 1928.9037 0.90372294 1313 P31948 STIP1 Stress-induced-phosphoprotein 1 yes yes 0 1 2 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.17 2.36 1 1 16 1 1 1 1 1 1 1 1 1 1 2 2 2 2 23.775 23.477 3;4 0.0010644 24321 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 63.31 53.21 469860000 162510000 19929000 0 3595500 4469200 3441600 7200200 5805300 4886100 8198900 18095000 57787000 19430000 45409000 109100000 14822 1313 13504 123901;123902;123903;123904;123905;123906;123907;123908;123909;123910;123911;123912;123913;123914;123915;123916;123917;123918 98660;98661;98662;98663;98664;98665 98662 1957 3 ETKPEPMEEDLPENKK Unmodified 1912.9088 0.90880832 1313 P31948 STIP1 Stress-induced-phosphoprotein 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 2 2 2 38.787 33.828 3;4 1.2253E-49 46516 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 130.29 113.61 753270000 604210000 122800000 26268000 0 0 0 0 0 0 0 0 0 0 0 0 14823 1313 13504 123919;123920;123921;123922;123923;123924 98666;98667;98668;98669;98670 98668 3 ETLAFPLWESTK Unmodified 1420.7238 0.72383172 5186 Q9Y485 DMXL1 DmX-like protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 93.208 88.297 2 2.7749E-05 109699 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.4 86.793 18888000 0 18888000 0 0 0 0 0 0 0 0 0 0 0 0 0 14824 5186 13505 123925 98671;98672;98673 98672 3 ETLAQLQQEFQR Unmodified 1489.7525 0.75250609 264 O15212 PFDN6 Prefoldin subunit 6 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 77.869 77.94 2 6.7968E-20 89577 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 160.75 130.94 57628000 0 0 0 0 2355300 0 0 0 0 6486900 0 9704900 0 8628800 30452000 14825 264 13506 123926;123927;123928;123929;123930;123931 98674;98675;98676;98677;98678 98675 5 ETLATQLDLAETK Unmodified 1431.7457 0.74568938 2296 Q13464 ROCK1 Rho-associated protein kinase 1 yes yes 0 0 0 By MS/MS 3 0 1 1 73.312 69.364 2 0.030853 84019 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 56.359 42.59 1824800 0 1824800 0 0 0 0 0 0 0 0 0 0 0 0 0 14826 2296 13507 123932 98679 98679 0 ETLAVNYEK Unmodified 1065.5342 0.53424004 2598 Q16204 CCDC6 Coiled-coil domain-containing protein 6 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.62 2.87 1 2 13 1 2 1 1 1 1 1 2 1 1 1 1 1 1 39.136 38.33 2 0.0039848 43021 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 88.294 58.956 674590000 59731 476320000 0 7152900 9054400 11803000 15051000 9445600 10369000 15696000 22296000 24537000 14153000 15374000 43277000 14827 2598 13508 123933;123934;123935;123936;123937;123938;123939;123940;123941;123942;123943;123944;123945;123946;123947;123948 98680;98681;98682;98683;98684;98685;98686;98687;98688;98689;98690;98691;98692;98693;98694 98680 14 ETLDPGDPETNNTIR Unmodified 1670.7748 0.77475768 3145 Q86UA1 PRPF39 Pre-mRNA-processing factor 39 yes yes 0 0 0 By MS/MS 10 0 1 1 45.686 46.426 2 0.0025335 51223 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.288 39.888 4381700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4381700 14828 3145 13509 123949 98695 98695 1 ETLDTLEK Unmodified 947.48114 0.48114184 375 O43847 NRD1 Nardilysin yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 32.602 32.957 2 0.0080045 35144 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.696 48.89 40901000 0 0 0 0 0 4328700 0 0 0 0 0 0 0 0 36572000 14829 375 13510 123950;123951 98696 98696 1 ETLDTMLDGLGR Unmodified 1319.6391 0.63911582 4785 Q9P000 COMMD9 COMM domain-containing protein 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 81.991 82.095 2 0.0092782 95015 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 48.981 24.759 36861000 0 0 0 0 1025000 2439300 1105000 3818300 2228600 4096900 3975100 2954100 1383100 2666600 11169000 14830 4785 13511 123952;123953;123954;123955;123956;123957;123958;123959;123960;123961;123962 98697;98698;98699;98700;98701;98702;98703;98704 98698 7 ETLEQLSEFNDSLK Unmodified 1651.7941 0.79409613 3605 Q8WZA0 LZIC Protein LZIC yes yes 0 0 0 By MS/MS By MS/MS 2.2 0.4 4 1 2 3 83.897 78.679 2 1.7264E-201 97636 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 272.03 252.78 468320000 10743000 457570000 0 0 0 0 0 0 0 0 0 0 0 0 0 14831 3605 13512 123963;123964;123965;123966;123967 98705;98706;98707;98708 98706 3 ETLESALIALDSEK Unmodified 1517.7825 0.78246882 4469 Q9H9B1 EHMT1 Histone-lysine N-methyltransferase EHMT1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 88.401 87.532 2;3 9.8523E-12 101125 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 118.48 87.797 25223000 0 14186000 0 0 0 0 0 1586500 0 2389000 0 0 0 1821900 5239100 14832 4469 13513 123968;123969;123970;123971;123972 98709;98710;98711 98711 3 ETLETISNEEQTPLLK Unmodified 1843.9415 0.94148865 3458 Q8NHP6 MOSPD2 Motile sperm domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 75.132 74.609 2 7.7269E-66 91925 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 234.65 197.09 83755000 0 45782000 0 2393500 3782100 6998500 3597500 3905600 0 0 0 0 6215100 3102700 7977400 14833 3458 13514 123973;123974;123975;123976;123977;123978;123979;123980;123981;123982 98712;98713;98714;98715;98716;98717;98718 98713 7 ETLFNDSRNK Unmodified 1222.5942 0.59421454 2689 Q4V328 GRIPAP1 GRIP1-associated protein 1 yes yes 0 0 1 By matching By MS/MS 2 0 2 1 1 29.441 25.028 2 0.0096996 31630 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 104.17 91.54 11351000 4773000 0 6578300 0 0 0 0 0 0 0 0 0 0 0 0 14834 2689 13515 123983;123984 98719 98719 0 ETLFNTLANNR Unmodified 1291.6521 0.65206377 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 69.765 69.709 2 0.00063023 80862 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 78.934 41.459 18200000 0 0 0 2035500 2279800 0 0 2695800 0 0 3151500 0 4396100 3641000 0 14835 1364 13516 123985;123986;123987;123988;123989;123990;123991;123992;123993 98720;98721;98722;98723;98724;98725;98726;98727;98728 98727 9 ETLGLLR Unmodified 800.4756 0.47560295 1598 P49770 EIF2B2 Translation initiation factor eIF-2B subunit beta yes yes 0 0 0 By MS/MS 10 0 1 1 55.688 56.312 2 0.050333 62439 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.714 18.103 186530000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 186530000 14836 1598 13517 123994 98729 98729 1 ETLGSEAVSSNVIDYGHASK Unmodified 2062.9807 0.98072771 2456 Q14966 ZNF638 Zinc finger protein 638 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.24 2 1 10 2 1 1 1 1 1 1 1 1 1 1 1 63.328 62.255 3 7.3441E-13 79636 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.45 84.528 274610000 0 141460000 2109300 7849100 10010000 12535000 9822500 0 9516600 18121000 15030000 22288000 15403000 10471000 0 14837 2456 13518 123995;123996;123997;123998;123999;124000;124001;124002;124003;124004;124005;124006;124007 98730;98731;98732;98733;98734;98735;98736;98737;98738;98739;98740;98741;98742;98743;98744;98745 98733 16 ETLGTGAFSEVVLAEEK Unmodified 1778.8938 0.89381018 3214 Q8IU85 CAMK1D Calcium/calmodulin-dependent protein kinase type 1D yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 87.489 83.851 2 8.2177E-58 103998 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 158.59 138.83 139660000 0 129200000 10455000 0 0 0 0 0 0 0 0 0 0 0 0 14838 3214 13519 124008;124009 98746 98746 1 ETLIIEPEK Unmodified 1070.5859 0.58594126 232 O14974 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 54.855 54.496 2 0.0075848 61573 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 72.038 59.831 223900000 0 73037000 0 9034200 14928000 11032000 0 11609000 8176100 16182000 17098000 21046000 16527000 12678000 12552000 14839 232 13520 124010;124011;124012;124013;124014;124015;124016;124017;124018;124019;124020;124021;124022 98747;98748;98749;98750;98751;98752;98753;98754;98755;98756;98757 98753 11 ETLLAMFK Oxidation (M) 967.50485 0.50485417 1209 P26639 TARS Threonine--tRNA ligase, cytoplasmic yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 5.69 3.99 7 6 3 2 2 1 2 1 1 1 74.121 70.599 1;2 0.0036955 91937 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 124.34 94.536 1820600000 542550000 860150000 344050000 0 0 0 3499500 0 0 0 17465000 0 0 9798500 43104000 14840 1209 13521 124023;124024;124025;124026;124027;124028;124029;124030;124031;124032;124033;124034;124035 98758;98759;98760;98761;98762;98763;98764;98765;98766;98767;98768;98769;98770;98771 98763 1768 14 ETLLAMFK Unmodified 951.50994 0.50993955 1209 P26639 TARS Threonine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 89.06 85.395 2 0.020877 102926 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 85.265 51.749 460860000 0 346810000 114050000 0 0 0 0 0 0 0 0 0 0 0 0 14841 1209 13521 124036;124037 98772;98773 98773 2 ETLLNSATTSLNSK Unmodified 1477.7624 0.76240208 1642 P50991 CCT4 T-complex protein 1 subunit delta yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 60.665 60.644 2 8.7561E-13 69335 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 120.96 100.66 138750000 0 0 0 8998000 9179400 15516000 17138000 0 0 17707000 22479000 0 21591000 26143000 0 14842 1642 13522 124038;124039;124040;124041;124042;124043;124044;124045 98774;98775 98775 0 ETLLQSYNK Unmodified 1094.5608 0.56078914 2543 Q15528 MED22 Mediator of RNA polymerase II transcription subunit 22 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 43.7 43.877 2 0.010372 48390 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.42 40.992 73589000 0 0 0 0 4378900 0 7013000 6873700 0 13722000 0 13988000 17394000 10220000 0 14843 2543 13523 124046;124047;124048;124049;124050;124051;124052;124053 98776;98777;98778 98778 3 ETLNQAETK Unmodified 1032.5088 0.50875357 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 12.126 11.527 2 4.3867E-09 10903 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 163.15 91.436 341220000 876370 28946000 0 16524000 12304000 15459000 15147000 17213000 17815000 31416000 29271000 48010000 31000000 23180000 54065000 14844 965 13524 124054;124055;124056;124057;124058;124059;124060;124061;124062;124063;124064;124065;124066;124067;124068;124069 98779;98780;98781;98782;98783;98784;98785;98786;98787;98788;98789;98790;98791;98792;98793;98794;98795;98796;98797 98791 18 ETLPAEQDLTTK Unmodified 1344.6773 0.67727546 1193 P25786 PSMA1 Proteasome subunit alpha type-1 yes yes 0 0 0 By MS/MS 10 0 1 1 48.569 49.304 2 2.4911E-05 55367 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 93.096 30.316 96813000 0 0 0 0 0 0 0 0 0 0 0 96813000 0 0 0 14845 1193 13525 124070 98798 98798 1 ETLPEFGEGK Unmodified 1105.5292 0.52915466 3193 Q86XA9 HEATR5A HEAT repeat-containing protein 5A yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 54.618 52.789 2 0.024368 59136 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 44.98 23.706 80404000 1444200 50737000 0 2982200 2632400 0 2830900 2794700 0 11538000 0 0 0 5444300 0 14846 3193 13526 124071;124072;124073;124074;124075;124076;124077;124078 98799;98800;98801;98802 98801 3 ETLPISSTPSK Unmodified 1158.6132 0.61321864 2147 Q08050 FOXM1 Forkhead box protein M1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 43.146 43.334 2 0.0059495 48168 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 57.785 28.623 65816000 0 0 0 0 6001700 0 6744600 7354500 8407600 7619000 9877300 13123000 0 6688600 0 14847 2147 13527 124079;124080;124081;124082;124083;124084;124085;124086 98803;98804;98805;98806;98807 98805 5 ETLPNVR Unmodified 827.45012 0.45011648 2060 Q01658 DR1 Protein Dr1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 31.994 32.409 2 0.050333 34723 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.714 38.919 92144000 0 0 0 0 0 0 0 3309000 0 0 40964000 0 0 4364900 43506000 14848 2060 13528 124087;124088;124089;124090 98808 98808 1 ETLPPPAAPPKPGK Unmodified 1398.7871 0.78710068 3025 Q70E73 RAPH1 Ras-associated and pleckstrin homology domains-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.22 2.2 1 8 1 1 1 1 1 1 1 1 1 39.399 38.937 3 0.0089942 47981 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 47.189 39.81 52153000 0 4017900 0 5953600 5989600 6896500 7428900 0 5426300 0 0 0 3857500 4888100 7694400 14849 3025 13529 124091;124092;124093;124094;124095;124096;124097;124098;124099 98809;98810;98811 98810 3 ETLQNVR Unmodified 858.45593 0.45593014 3301 Q8N0X7 SPG20 Spartin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 17.75 17.845 2 0.02335 18157 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 89.903 36.381 828390000 0 0 0 65752000 79613000 79846000 90447000 87377000 69029000 97764000 118380000 0 140180000 0 0 14850 3301 13530 124100;124101;124102;124103;124104;124105;124106;124107;124108 98812;98813;98814;98815;98816;98817;98818;98819;98820 98814 9 ETLQQHK Unmodified 882.45593 0.45593014 1002 P14625 HSP90B1 Endoplasmin yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 1.4933 -1.827 2 0.028473 907 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.048 43.365 17961000 0 17961000 0 0 0 0 0 0 0 0 0 0 0 0 0 14851 1002 13531 124109;124110 98821;98822 98821 2 ETLQRTDAPK Unmodified 1157.6041 0.60405094 754 P01891;P10316;P01892;P30512;P30459 HLA-A HLA class I histocompatibility antigen, A-68 alpha chain;HLA class I histocompatibility antigen, A-69 alpha chain;HLA class I histocompatibility antigen, A-2 alpha chain;HLA class I histocompatibility antigen, A-29 alpha chain;HLA class I histocompatibility antigen, A-74 alpha chain no no 0 0 1 By MS/MS 3 0 1 1 14.796 11.27 3 0.02074 14228 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 43.297 24.551 19652000 0 19652000 0 0 0 0 0 0 0 0 0 0 0 0 0 14852 754 13532 124111 98823 98823 1 ETLQYLQQNAK Unmodified 1334.683 0.68302954 4126 Q9BSJ2 TUBGCP2 Gamma-tubulin complex component 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 47.801 47.776 2 4.0427E-05 53664 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 116.73 90.342 108560000 0 0 0 11395000 10505000 13492000 10400000 14631000 8406400 19048000 0 0 20684000 0 0 14853 4126 13533 124112;124113;124114;124115;124116;124117;124118;124119 98824;98825;98826;98827;98828;98829;98830;98831;98832 98825 9 ETLRFISTK Unmodified 1093.6132 0.61315906 372 O43823 AKAP8 A-kinase anchor protein 8 yes yes 0 0 1 By MS/MS 2 0 1 1 57.507 49.327 2 0.033343 67453 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 114.86 49.606 25339000 25339000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14854 372 13534 124120 98833 98833 0 ETLSGLAK Unmodified 817.45453 0.45453316 1421 P40855 PEX19 Peroxisomal biogenesis factor 19 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 6.25 3.77 1 1 2 2 1 1 33.308 31.215 2 0.038396 40667 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.342 10.953 252100000 0 238120000 0 0 0 0 0 0 0 0 0 0 0 5159400 8814200 14855 1421 13535 124121;124122;124123;124124 98834;98835 98834 2 ETLSLTVDAK Unmodified 1075.5761 0.57610486 2727 Q5H9R7 PPP6R3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 yes yes 0 0 0 By MS/MS 2 0 1 1 61.127 55.252 2 0.012025 71215 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.325 51.378 56830000 0 56830000 0 0 0 0 0 0 0 0 0 0 0 0 0 14856 2727 13536 124125 98836 98836 1 ETLSTSDCLASK Unmodified 1310.6024 0.60239596 3037 Q76L83 ASXL2 Putative Polycomb group protein ASXL2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 34.498 34.671 2 0.014663 38021 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 43.419 29.649 40627000 0 0 0 3110000 2819500 0 3149600 3308700 3270400 4717500 0 6887300 5333600 2861400 5169600 14857 3037 13537 124126;124127;124128;124129;124130;124131;124132;124133;124134;124135 98837;98838;98839;98840;98841 98837 5 ETLTFPPEVPISEK Unmodified 1585.8239 0.8239397 2507 Q15208 STK38 Serine/threonine-protein kinase 38 yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 86.014 82.393 2 0.018319 103181 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 59.265 46.686 53930000 0 52548000 1381300 0 0 0 0 0 0 0 0 0 0 0 0 14858 2507 13538 124136;124137 98842 98842 1 ETLTNCTEPLK Unmodified 1304.6282 0.62821678 3580 Q8WX92 NELFB Negative elongation factor B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 40.628 39.74 2 8.2413E-11 44539 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 152.34 118.38 604410000 9783400 91173000 0 0 37235000 47261000 0 30768000 51260000 71250000 66546000 78705000 0 46802000 73623000 14859 3580 13539 124138;124139;124140;124141;124142;124143;124144;124145;124146;124147;124148 98843;98844;98845;98846;98847 98846 5 ETLTPSELR Unmodified 1044.5451 0.54513908 4523 Q9HCY8 S100A14 Protein S100-A14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 44.937 45.091 2 0.0037123 51047 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 101.54 59.433 82066000 0 0 0 33371000 0 7260200 0 14599000 0 8286600 0 9259300 9289600 0 0 14860 4523 13540 124149;124150;124151;124152;124153;124154 98848;98849;98850;98851;98852 98852 5 ETLVFPPEVPISEK Unmodified 1583.8447 0.84467514 5101 Q9Y2H1 STK38L Serine/threonine-protein kinase 38-like yes yes 0 0 0 By MS/MS 2 0 1 1 89.666 84.793 2 0.0012003 105572 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.32 92.11 29268000 0 29268000 0 0 0 0 0 0 0 0 0 0 0 0 0 14861 5101 13541 124155 98853 98853 1 ETMQFLNDR Unmodified 1152.5234 0.52335778 86;87;52;111 CON__Q14525;Q14525;CON__Q15323;CON__Q9UE12;Q15323;CON__REFSEQ:XP_986630;CON__O76013;O76013 KRT33B;KRT31;KRT36 Keratin, type I cuticular Ha3-II;Keratin, type I cuticular Ha1;Keratin, type I cuticular Ha6 no no 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 54.764 55.167 2 0.0037946 61567 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 111.95 104.38 + 40004000 0 0 0 0 0 0 0 9314000 0 0 0 0 0 0 30690000 14862 86;87;111;52 13542 124156;124157 98854;98855 98855 2 ETMQSLNDR Oxidation (M) 1108.4819 0.48188689 814;94 P05783;CON__Q497I4 KRT18 Keratin, type I cytoskeletal 18 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 1 2 1 1 1 1 2 9.3816 9.5334 2 0.0020081 8203 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 91.318 75.115 + 1107700000 0 0 0 70854000 97897000 79671000 106550000 70762000 48314000 88419000 143360000 141330000 99914000 64994000 95611000 14863 814;94 13543 124158;124159;124160;124161;124162;124163;124164;124165;124166;124167;124168;124169;124170;124171 98856;98857;98858;98859;98860;98861;98862;98863;98864;98865;98866;98867;98868;98869;98870;98871;98872;98873;98874 98860 127;977 18 ETMQSLNDR Unmodified 1092.487 0.48697227 814;94 P05783;CON__Q497I4 KRT18 Keratin, type I cytoskeletal 18 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.98 22.188 2 1.7586E-05 22681 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 152.63 95.071 + 2443500000 0 0 0 114190000 166760000 208020000 247350000 122500000 148980000 260100000 234910000 291520000 188500000 187390000 273270000 14864 814;94 13543 124172;124173;124174;124175;124176;124177;124178;124179;124180;124181;124182;124183 98875;98876;98877;98878;98879;98880;98881;98882;98883;98884;98885;98886;98887;98888;98889;98890;98891;98892 98882 17 ETMQSLNDRLASYLDR Oxidation (M) 1926.9105 0.91053965 814 P05783 KRT18 Keratin, type I cytoskeletal 18 yes yes 0 1 1 By matching By MS/MS By MS/MS 10 0 3 1 1 1 75.202 75.232 3 0.0021361 86330 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.693 27.86 34329000 0 0 0 0 3662600 0 0 0 0 0 0 0 0 4748100 25918000 14865 814 13544 124184;124185;124186 98893 98893 977 1 ETMTLILK Unmodified 947.53615 0.5361543 2531 Q15418 RPS6KA1 Ribosomal protein S6 kinase alpha-1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 74.501 70.057 2 0.02908 87806 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.058 39.412 52420000 0 52420000 0 0 0 0 0 0 0 0 0 0 0 0 0 14866 2531 13545 124187;124188 98894 98894 1 ETMTPGYPQDLDIIDGR Oxidation (M) 1935.8884 0.88840723 2854 Q68CZ2 TNS3 Tensin-3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.009 79.067 2 1.0729E-10 91315 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 90.731 68.972 78081000 0 0 0 2862300 4444000 7228500 4150000 4621700 5505300 8338300 9687600 9380900 5264700 5347500 11250000 14867 2854 13546 124189;124190;124191;124192;124193;124194;124195;124196;124197;124198;124199;124200 98895;98896;98897;98898;98899;98900;98901;98902;98903;98904;98905;98906 98895 4511 12 ETMTPGYPQDLDIIDGRILSSK Oxidation (M) 2464.2156 0.21555502 2854 Q68CZ2 TNS3 Tensin-3 yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 88.672 85.018 3 0.00027335 105775 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.747 54.289 14084000 0 12674000 1410000 0 0 0 0 0 0 0 0 0 0 0 0 14868 2854 13547 124201;124202 98907 98907 4511 1 ETMTPGYPQDLDIIDGRILSSK Unmodified 2448.2206 0.2206404 2854 Q68CZ2 TNS3 Tensin-3 yes yes 0 0 1 By MS/MS 2 0 1 1 92.143 87.232 3 0.046327 108393 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 21.349 7.0394 25117000 0 25117000 0 0 0 0 0 0 0 0 0 0 0 0 0 14869 2854 13547 124203 98908 98908 1 ETMVTSTTEPSR Unmodified 1337.6133 0.613295 996 P14314 PRKCSH Glucosidase 2 subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 26.751 26.944 2 2.3882E-05 27753 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 123.75 119.83 89707000 0 0 0 0 4213700 4829300 4323300 5651500 2305100 4171100 14736000 0 4746400 13678000 31053000 14870 996 13548 124204;124205;124206;124207;124208;124209;124210;124211;124212;124213 98909;98910;98911;98912;98913;98914;98915;98916;98917;98918 98916 10 ETMVTSTTEPSR Oxidation (M) 1353.6082 0.60820962 996 P14314 PRKCSH Glucosidase 2 subunit beta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 21 2 2 2 2 2 2 2 2 1 2 2 16.452 16.647 2 6.1324E-05 15180 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.496 74.289 55847000 0 0 0 3329200 2692000 0 3994600 3748300 1693300 3578800 7790400 6890300 2123200 6457400 13550000 14871 996 13548 124214;124215;124216;124217;124218;124219;124220;124221;124222;124223;124224;124225;124226;124227;124228;124229;124230;124231;124232;124233;124234 98919;98920;98921;98922;98923;98924 98919 1348 6 ETMYFAPSMK Unmodified 1203.5304 0.53041699 3870 Q96HR8 NAF1 H/ACA ribonucleoprotein complex non-core subunit NAF1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 65.62 65.101 2 0.0034855 82810 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.692 60.895 88976000 0 49037000 0 0 0 0 2644800 0 1703800 6608400 6187300 0 2757200 5262400 14776000 14872 3870 13549 124235;124236;124237;124238;124239;124240;124241;124242 98925;98926;98927;98928;98929;98930;98931 98927 7 ETMYFAPSMK Oxidation (M) 1219.5253 0.52533161 3870 Q96HR8 NAF1 H/ACA ribonucleoprotein complex non-core subunit NAF1 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 52.302 51.751 2 0.0073553 57605 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.722 49.241 54488000 0 19496000 0 0 2308000 0 0 0 3414600 4476100 5568000 0 5687900 6747900 6789700 14873 3870 13549 124243;124244;124245;124246;124247;124248;124249;124250 98932;98933;98934 98933 5378 3 ETNDTWNSQFGK Unmodified 1425.6161 0.61607219 3107 Q7Z5K2 WAPAL Wings apart-like protein homolog yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 45.881 45.082 2 0.00084617 56175 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.71 98.941 118810000 0 60813000 0 2884000 6208900 0 0 0 3655500 4645300 6799400 8166100 7035800 6469900 12131000 14874 3107 13550 124251;124252;124253;124254;124255;124256;124257;124258;124259;124260;124261;124262 98935;98936;98937;98938;98939;98940;98941;98942;98943 98937 8 ETNEGVLSVVK Unmodified 1173.6241 0.62411768 2417 Q14574 DSC3 Desmocollin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.248 56.374 2 0.00059756 65255 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 97.965 65.356 193680000 0 0 0 29414000 11051000 13598000 11791000 31442000 7468000 15039000 14431000 20353000 21930000 9484700 7678700 14875 2417 13551 124263;124264;124265;124266;124267;124268;124269;124270;124271;124272;124273;124274 98944;98945;98946;98947;98948;98949;98950;98951;98952;98953 98953 10 ETNESPWR Unmodified 1017.4516 0.45157304 775 P04150 NR3C1 Glucocorticoid receptor yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 26.656 26.916 2 0.032623 28735 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 54.205 17.046 126460000 0 0 0 0 6937700 9276300 0 8905600 8503500 12619000 15821000 21703000 14608000 13650000 14436000 14876 775 13552 124275;124276;124277;124278;124279;124280;124281;124282;124283;124284 98954;98955 98954 2 ETNFQVMQMK Unmodified 1254.5737 0.57367879 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 0 By matching By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 58.864 59.158 2 0.0026685 66641 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.296 66.521 23907000 0 0 0 0 0 3557900 2599500 0 0 0 0 5778600 0 4039300 7932000 14877 2361 13553 124285;124286;124287;124288;124289 98956 98956 1 ETNFQVMQMK 2 Oxidation (M) 1286.5635 0.56350803 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 2 0 By MS/MS 10 0 1 1 26.805 27.15 2 0.029608 29121 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 49.097 33.946 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14878 2361 13553 124290 98957 98957 1 ETNGLLQEELEGLQRK Unmodified 1855.964 0.96395543 5278 Q9Y6D9 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes yes 0 0 1 By MS/MS 10 0 1 1 78.603 78.849 3 0.0081164 90712 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.89 28.028 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14879 5278 13554 124291 98958 98958 1 ETNLDSLPLVDTHSK Unmodified 1667.8366 0.83662965 870 P08670 VIM Vimentin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 30 2 2 3 3 3 2 3 2 2 3 2 3 69.495 69.59 2;3 2.1551E-44 80561 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 179.93 164.3 11395000000 0 0 0 545730000 733520000 899110000 890240000 850590000 583980000 1014900000 1072500000 1292300000 1006100000 879230000 1626700000 14880 870 13555 124292;124293;124294;124295;124296;124297;124298;124299;124300;124301;124302;124303;124304;124305;124306;124307;124308;124309;124310;124311;124312;124313;124314;124315;124316;124317;124318;124319;124320;124321 98959;98960;98961;98962;98963;98964;98965;98966;98967;98968;98969;98970;98971;98972;98973;98974;98975;98976;98977;98978;98979;98980;98981;98982;98983;98984;98985;98986;98987;98988;98989;98990;98991;98992;98993;98994;98995;98996;98997 98962 36 ETNNAAIIMK Oxidation (M) 1119.5594 0.55940893 1823 P60983 GMFB Glia maturation factor beta yes yes 0 1 0 By matching By MS/MS 2 0 2 1 1 28.31 23.398 2 0.0087586 30777 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.213 41.04 39121000 4698200 34423000 0 0 0 0 0 0 0 0 0 0 0 0 0 14881 1823 13556 124322;124323 98998 98998 2958 1 ETNPHHPPAWIASAR Unmodified 1682.8277 0.82773672 601 O94906 PRPF6 Pre-mRNA-processing factor 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 14 1 2 1 2 2 2 1 1 2 41.466 41.747 3;4 0.0022456 46718 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 43.813 36.755 112750000 0 0 0 3356600 0 11902000 0 5716100 12526000 15285000 0 20320000 9830000 6282000 27529000 14882 601 13557 124324;124325;124326;124327;124328;124329;124330;124331;124332;124333;124334;124335;124336;124337 98999;99000;99001;99002 98999 4 ETNTDEAANDNMAVRPK Unmodified 1874.8429 0.84285402 2866 Q6AWC2 WWC2 Protein WWC2 yes yes 0 0 1 By MS/MS 2 0 1 1 29.808 25.415 3 0.0021145 33421 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 55.097 42.265 7685200 0 7685200 0 0 0 0 0 0 0 0 0 0 0 0 0 14883 2866 13558 124338 99003 99003 1 ETPAATEAPSSTPK Unmodified 1385.6674 0.66743906 1993 P80723 BASP1 Brain acid soluble protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.34 1 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 29.276 29.162 2 3.8613E-31 92638 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 151.07 144.19 3003400000 819270000 138100000 0 87835000 119120000 87136000 113460000 107630000 82404000 129090000 251540000 315980000 212270000 209610000 329940000 14884 1993 13559 124339;124340;124341;124342;124343;124344;124345;124346;124347;124348;124349;124350;124351;124352;124353 99004;99005;99006;99007;99008;99009;99010;99011;99012;99013;99014;99015;99016;99017;99018;99019 99010 16 ETPCILSVNVK Unmodified 1258.6591 0.65912298 2986 Q6VMQ6 ATF7IP Activating transcription factor 7-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.479 69.554 2 0.0072105 79554 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 54.608 36.296 47769000 0 0 0 2509400 2429500 3344700 3339100 2311600 3176500 4419900 4807400 5611400 4334900 5261700 6222700 14885 2986 13560 124354;124355;124356;124357;124358;124359;124360;124361;124362;124363;124364;124365 99020;99021;99022;99023;99024 99022 5 ETPDPWQSLDPFDSLESK Unmodified 2089.948 0.94803059 2885 Q6IBW4 NCAPH2 Condensin-2 complex subunit H2 yes yes 0 0 0 By MS/MS 3 0 1 1 96.382 93.105 2 0.0022936 111576 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 74.987 69.494 3809000 0 3809000 0 0 0 0 0 0 0 0 0 0 0 0 0 14886 2885 13561 124366 99025 99025 1 ETPDTLSDPQTVPEEEREAK Unmodified 2270.055 0.055014861 589 O94822 LTN1 E3 ubiquitin-protein ligase listerin yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS 6.17 3.85 2 1 3 1 2 1 1 1 48.657 45.54 3 2.0906E-08 55913 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 76.301 72.273 83797000 9690000 55361000 0 0 4672500 0 0 0 0 8323900 0 0 0 5749000 0 14887 589 13562 124367;124368;124369;124370;124371;124372 99026;99027;99028;99029;99030;99031 99030 6 ETPETFYIGK Unmodified 1183.5761 0.57610486 3038 Q7KZ85 SUPT6H Transcription elongation factor SPT6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 59.159 58.932 2 0.0097298 67121 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 80.438 58.052 12860000 0 0 0 2389400 1999600 0 4924400 3546400 0 0 0 0 0 0 0 14888 3038 13563 124373;124374;124375;124376;124377;124378 99032;99033;99034;99035;99036 99035 5 ETPFELIEALLK Unmodified 1401.7755 0.77553294 2152 Q08211 DHX9 ATP-dependent RNA helicase A yes yes 0 0 0 By MS/MS By MS/MS 2 0.707 1 2 1 2 2 106.25 103.43 2 0.0062571 124870 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.898 69.873 78842000 63339000 15503000 0 0 0 0 0 0 0 0 0 0 0 0 0 14889 2152 13564 124379;124380;124381;124382 99037;99038;99039 99037 3 ETPHSPGVEDAPIAK Unmodified 1546.7627 0.76273643 4893 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 37.884 37.967 3 1.7524E-14 42132 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 74.853 64.401 222310000 0 0 0 17818000 23163000 17180000 24596000 29840000 0 27785000 40621000 41302000 0 0 0 14890 4893 13565 124383;124384;124385;124386;124387;124388;124389;124390 99040;99041;99042;99043;99044;99045;99046 99040 6 ETPPAEGEGHEAPIAK Unmodified 1631.7791 0.77911477 2795 Q5TCZ1 SH3PXD2A SH3 and PX domain-containing protein 2A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.279 27.477 3 0.0022035 29347 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 44.734 30.381 111490000 0 0 0 5362500 7975700 10725000 8865200 8951100 10630000 9759000 10806000 11148000 9238400 7938400 10087000 14891 2795 13566 124391;124392;124393;124394;124395;124396;124397;124398;124399;124400;124401;124402 99047;99048;99049;99050;99051;99052;99053;99054;99055 99051 8 ETPPNGNLSPAPR Unmodified 1348.6735 0.67352749 1546 P48634 PRRC2A Protein PRRC2A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 2 1 1 1 1 1 1 33.428 33.561 2 0.00017133 35774 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 83.862 61.221 68101000 0 0 0 4262100 4166800 4303500 9692600 5328900 5684800 6908300 0 13026000 0 8314300 6413700 14892 1546 13567 124403;124404;124405;124406;124407;124408;124409;124410;124411;124412;124413 99056;99057;99058;99059;99060;99061;99062;99063;99064;99065;99066;99067;99068 99064 13 ETPPPLVPPAAR Unmodified 1243.6925 0.69247202 4092 Q9BQA1 WDR77 Methylosome protein 50 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.975 59.088 2 0.024103 68206 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 38.086 20.222 221360000 0 0 0 14298000 10819000 12639000 13339000 13512000 11718000 17395000 28697000 24718000 18796000 21107000 34322000 14893 4092 13568 124414;124415;124416;124417;124418;124419;124420;124421;124422;124423;124424;124425 99069;99070;99071;99072;99073 99073 5 ETPPTAHLILPEQHMSLAQQK Oxidation (M) 2384.2158 0.2158298 3250 Q8IWZ3 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 yes yes 0 1 0 By MS/MS 2 0 1 1 73.243 65.047 4 0.00031041 86239 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.32 33.158 23491000 23491000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14894 3250 13569 124426 99074 99074 4857 1 ETPPTAHLILPEQHMSLAQQK Unmodified 2368.2209 0.22091517 3250 Q8IWZ3 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 78.762 72.421 3;4 6.5763E-07 94224 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.114 61.962 47583000 44510000 0 3072900 0 0 0 0 0 0 0 0 0 0 0 0 14895 3250 13569 124427;124428;124429 99075;99076;99077 99075 1 ETPQPSQPPEVPAHEMPTK Unmodified 2098.9994 0.99935466 5200 Q9Y4F5 CEP170B Centrosomal protein of 170 kDa protein B yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 53.593 48.245 3 0.00064003 62510 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 43.164 34.117 17919000 0 17919000 0 0 0 0 0 0 0 0 0 0 0 0 0 14896 5200 13570 124430;124431 99078;99079 99079 2 ETPQSLAFTR Unmodified 1148.5826 0.58258722 4867 Q9UDY2 TJP2 Tight junction protein ZO-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 51.67 51.494 2 0.021365 59023 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 54.982 43.613 29285000 0 0 0 6839200 4192300 6814300 5002100 0 0 6437200 0 0 0 0 0 14897 4867 13571 124432;124433;124434;124435;124436 99080;99081;99082 99082 3 ETPSQENGPTAK Unmodified 1257.5837 0.58370943 275 O15355 PPM1G Protein phosphatase 1G yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 8.7346 8.8681 2 5.4373E-08 6115 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 145.25 131.66 98240000 0 0 0 4439300 3524000 5304900 5656700 3682000 3201300 5232800 22247000 12899000 9814200 7597200 14642000 14898 275 13572 124437;124438;124439;124440;124441;124442;124443;124444;124445;124446;124447;124448 99083;99084;99085;99086;99087;99088;99089;99090;99091;99092 99086 10 ETPSSILLGSNQGSDHSR Unmodified 1883.8973 0.89733243 5005 Q9ULU4 ZMYND8 Protein kinase C-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 52.165 52.432 3 0.023753 59029 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 21.938 16.279 71702000 0 0 0 0 0 11232000 9391900 8363900 0 12400000 9436100 10316000 10562000 0 0 14899 5005 13573 124449;124450;124451;124452;124453;124454;124455 99093;99094;99095 99093 3 ETPYSEEDFQHLQK Unmodified 1749.7846 0.78459408 4316 Q9H081 MIS12 Protein MIS12 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 7 3.69 1 1 3 2 1 1 1 53.851 51.917 3 0.0033547 66871 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 54.898 48.461 93612000 0 78478000 0 0 0 0 0 0 3083000 5300600 0 0 0 0 6750200 14900 4316 13574 124456;124457;124458;124459;124460 99096;99097 99097 2 ETQALILAPTR Unmodified 1211.6874 0.68738664 1400 P38919 EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.802 61.902 2 0.0027992 70178 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 80.102 72.17 303250000 0 0 0 13234000 17277000 23981000 22328000 31517000 12302000 33848000 33196000 37459000 19096000 17544000 41466000 14901 1400 13575 124461;124462;124463;124464;124465;124466;124467;124468;124469;124470;124471;124472 99098;99099;99100;99101;99102 99102 4 ETQALVLAPTR Unmodified 1197.6717 0.67173657 2396 Q14240 EIF4A2 Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 54.665 54.967 2 0.0059429 61280 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.726 38.999 19493000 0 0 0 0 0 5708500 0 0 0 0 0 0 0 4186400 9597700 14902 2396 13576 124473;124474;124475 99103;99104;99105 99104 2 ETQAQACPQEGTEAHGAR Unmodified 1939.8443 0.844251 3321 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 13.11 13.226 3 9.3372E-06 12533 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 46.514 42.978 41144000 0 0 0 2415600 1791200 3581800 3361000 3728700 2784900 8183800 0 4018500 0 3257200 8021100 14903 3321 13577 124476;124477;124478;124479;124480;124481;124482;124483;124484;124485 99106;99107;99108;99109 99106 4 ETQDLIEQGALLQAHRK Unmodified 1949.033 0.033038048 419 O60645 EXOC3 Exocyst complex component 3 yes yes 0 0 1 By MS/MS By matching 10 0 2 1 1 62.324 62.5 4 0.026862 71168 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 16.522 7.0482 11612000 0 0 0 0 0 0 0 7567800 0 0 0 0 4044300 0 0 14904 419 13578 124486;124487 99110 99110 1 ETQFAQIFEPLHK Unmodified 1586.8093 0.80929269 4633 Q9NTI5 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 86.528 81.4 3 0.00078103 102572 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.116 48.666 65380000 32648000 30618000 2114100 0 0 0 0 0 0 0 0 0 0 0 0 14905 4633 13579 124488;124489;124490 99111;99112 99111 2 ETQIFVEK Unmodified 992.51786 0.51786169 2786 Q5T8P6 RBM26 RNA-binding protein 26 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.044 41.222 2 0.0068832 45909 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 92.439 59.599 601180000 0 0 0 34270000 41134000 47983000 42261000 42701000 38986000 57562000 55185000 73066000 56696000 49848000 61492000 14906 2786 13580 124491;124492;124493;124494;124495;124496;124497;124498;124499;124500;124501;124502 99113;99114;99115;99116;99117;99118;99119;99120;99121;99122 99113 9 ETQKSIYYITGESK Unmodified 1645.8199 0.81991695 862 P08238 HSP90AB1 Heat shock protein HSP 90-beta yes yes 0 0 1 By MS/MS 10 0 1 1 45.565 46.305 3 0.025101 50989 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 22.214 5.6401 7493700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7493700 14907 862 13581 124503 99123 99123 1 ETQPGLLVASVLGLQK Unmodified 1651.9509 0.95087155 3713 Q969F9 HPS3 Hermansky-Pudlak syndrome 3 protein yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 95.684 95.829 2 0.021897 111241 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 31.228 22.715 5835000 0 0 0 0 0 0 0 0 0 2287600 997110 0 0 786290 1764000 14908 3713 13582 124504;124505;124506;124507 99124 99124 1 ETQRLLAEPVPGIK Unmodified 1549.8828 0.88279198 1833 P61088;Q5JXB2 UBE2N;UBE2NL Ubiquitin-conjugating enzyme E2 N;Putative ubiquitin-conjugating enzyme E2 N-like yes no 0 0 1 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 1 3 2 73.004 68.067 2;3 2.1007E-15 88433 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.348 86.619 2959300000 278440000 1676400000 1004500000 0 0 0 0 0 0 0 0 0 0 0 0 14909 1833 13583 124508;124509;124510;124511;124512;124513 99125;99126;99127;99128;99129;99130;99131 99129 6 ETQRLLEEEDSK Unmodified 1475.7104 0.71036651 3784 Q96CT7 CCDC124 Coiled-coil domain-containing protein 124 yes yes 0 0 1 By MS/MS By MS/MS 2 0 4 2 2 30.751 26.926 2;3 0.019025 35574 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 46.704 31.805 49409000 0 38728000 10681000 0 0 0 0 0 0 0 0 0 0 0 0 14910 3784 13584 124514;124515;124516;124517 99132;99133 99133 2 ETQSQLETER Unmodified 1219.5681 0.56805936 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.343 16.522 2 1.3004E-09 16112 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 157.96 66.638 519000000 0 0 0 70734000 27471000 31646000 22598000 135840000 15927000 26856000 36298000 55618000 41083000 24721000 30214000 14911 1029 13585 124518;124519;124520;124521;124522;124523;124524;124525;124526;124527;124528;124529 99134;99135;99136;99137;99138;99139;99140;99141;99142;99143;99144;99145 99142 12 ETQSRGMEGTAARVK Oxidation (M) 1635.7999 0.79986699 632 O95239 KIF4A Chromosome-associated kinesin KIF4A yes yes 0 1 2 By MS/MS By MS/MS 2 0 2 1 1 7.579 4.7126 3 0.043393 8173 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.267 37.663 54064000 49417000 0 4647300 0 0 0 0 0 0 0 0 0 0 0 0 14912 632 13586 124530;124531 99146 99146 1 ETQSRGMEGTAARVK Unmodified 1619.805 0.80495237 632 O95239 KIF4A Chromosome-associated kinesin KIF4A yes yes 0 0 2 By MS/MS 2 0 1 1 19.301 14.717 3 8.1293E-38 21361 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 125.28 106.82 63847000 63847000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14913 632 13586 124532 99147 99147 1 ETQTECEWTVDTSK Unmodified 1712.7199 0.71994491 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.391 45.56 2 2.4888E-26 50785 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 151.98 148.65 90745000 0 0 0 13365000 5168400 5221800 4598900 6140000 4412200 9652200 8167100 12184000 7010000 5998400 8827700 14914 1029 13587 124533;124534;124535;124536;124537;124538;124539;124540;124541;124542;124543;124544 99148;99149;99150;99151;99152;99153;99154;99155;99156;99157;99158;99159 99157 12 ETQTHENMSQLSEEEQNK Unmodified 2160.923 0.92295483 4215 Q9BWU0 SLC4A1AP Kanadaptin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 30.522 30.019 3 2.8475E-38 31440 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 131.39 123.1 140760000 0 51944000 0 0 3662500 6449600 5473400 5051200 3677500 8055100 7899400 7746600 13250000 13258000 14297000 14915 4215 13588 124545;124546;124547;124548;124549;124550;124551;124552;124553;124554;124555;124556;124557 99160;99161;99162;99163;99164;99165;99166;99167;99168;99169 99163 10 ETQTHENMSQLSEEEQNK Oxidation (M) 2176.9179 0.91786945 4215 Q9BWU0 SLC4A1AP Kanadaptin yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 20.112 16.439 3 1.6603E-27 21516 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.76 119.05 25336000 0 25336000 0 0 0 0 0 0 0 0 0 0 0 0 0 14916 4215 13588 124558;124559 99170 99170 5693 1 ETQTPVMAQPK Unmodified 1228.6122 0.61217279 2281 Q13409 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 30.462 29.826 2 0.00034301 31427 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.936 78.156 173730000 6599900 11461000 0 0 7322000 8931100 7968900 9059600 7447900 12856000 18429000 17554000 13945000 17766000 34387000 14917 2281 13589 124560;124561;124562;124563;124564;124565;124566;124567;124568;124569;124570;124571;124572 99171;99172;99173;99174;99175;99176;99177;99178;99179;99180 99174 9 ETQTPVMAQPK Oxidation (M) 1244.6071 0.60708741 2281 Q13409 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 18.499 18.684 2 0.0073899 17835 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.113 55.373 55819000 0 0 0 4102200 3837100 4222100 4067100 2450500 3929800 4755600 4996500 8461700 4425500 0 10571000 14918 2281 13589 124573;124574;124575;124576;124577;124578;124579;124580;124581;124582;124583 99181 99181 3712 0 ETQTPVMAQPKEDEEEDDDVVAPKPPIEPEEEK Unmodified 3747.7197 0.71967673 2281 Q13409 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 yes yes 0 0 2 By MS/MS 2 0 1 1 74.703 66.573 4 8.5667E-05 87907 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 39.477 37.562 30063000 30063000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14919 2281 13590 124584 99182;99183 99182 2 ETQVILLDTPGIISPGK Unmodified 1779.9982 0.99821567 525 O75616 ERAL1 GTPase Era, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 87.223 87.363 2 0.00015619 101059 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 90.731 77.303 23937000 0 0 0 0 0 1676000 1732500 1301600 1369400 3162100 2125000 3334300 1956800 2683100 4595700 14920 525 13591 124585;124586;124587;124588;124589;124590;124591;124592;124593;124594 99184;99185;99186;99187;99188;99189;99190;99191;99192;99193 99186 10 ETRLFLDGEEEK Unmodified 1464.7096 0.70963822 4607 Q9NRN7 AASDHPPT L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 2 2 2 56.346 50.53 2;3 0.0064091 63008 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 60.161 44.575 112870000 47759000 29546000 35561000 0 0 0 0 0 0 0 0 0 0 0 0 14921 4607 13592 124595;124596;124597;124598;124599;124600 99194;99195;99196 99196 3 ETRSVEEIAPDPSEAK Unmodified 1756.8479 0.84792262 4622 Q9NS91 RAD18 E3 ubiquitin-protein ligase RAD18 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 46.046 40.905 3 0.0047504 53450 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 49.535 38.748 34379000 0 34379000 0 0 0 0 0 0 0 0 0 0 0 0 0 14922 4622 13593 124601;124602;124603 99197;99198;99199 99197 3 ETRVDLHLPR Unmodified 1234.6782 0.67821894 1251 P29508 SERPINB3 Serpin B3 yes yes 0 0 1 By MS/MS 10 0 1 1 49.398 48.779 3 0.0010118 55646 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 85.29 58.617 30298000 0 0 0 30298000 0 0 0 0 0 0 0 0 0 0 0 14923 1251 13594 124604 99200 99200 1 ETSALEASSPLLTGQILER Unmodified 2014.0582 0.058249746 2443 Q14746 COG2 Conserved oligomeric Golgi complex subunit 2 yes yes 0 0 0 By MS/MS 10 0 1 1 86.558 86.717 2 2.1205E-08 100262 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.629 75.21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14924 2443 13595 124605 99201 99201 1 ETSAVAEAQK Unmodified 1032.5088 0.50875357 2831 Q5VZE5 NAA35 N-alpha-acetyltransferase 35, NatC auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 9.4598 9.5818 2 0.0016488 8122 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 104.06 66.898 38972000 0 0 0 0 1583200 1205500 0 0 0 6112600 14974000 15097000 0 0 0 14925 2831 13596 124606;124607;124608;124609;124610 99202;99203;99204;99205;99206 99205 4 ETSELGGSDVSILDTTR Unmodified 1778.8534 0.85340193 2838 Q63HN8 RNF213 E3 ubiquitin-protein ligase RNF213 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 72.656 72.782 2 0.00021738 83337 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.469 64.215 6521000 0 0 0 0 0 0 2265100 0 0 4255800 0 0 0 0 0 14926 2838 13597 124611;124612;124613;124614 99207;99208;99209 99208 3 ETSFGSSENITMTSLSK Unmodified 1817.8353 0.83530902 5023 Q9UMZ2 SYNRG Synergin gamma yes yes 0 0 0 By MS/MS 2 0 1 1 74.649 69.494 2 2.5881E-05 87232 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.85 89.947 31038000 0 31038000 0 0 0 0 0 0 0 0 0 0 0 0 0 14927 5023 13598 124615 99210 99210 1 ETSFNQAYGR Unmodified 1171.5258 0.52580062 1454 P42345 MTOR Serine/threonine-protein kinase mTOR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 29.929 30.641 2 0.012343 32851 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 83.265 68.114 7624100 0 0 0 0 0 0 0 0 0 0 0 7624100 0 0 0 14928 1454 13599 124616;124617;124618 99211;99212;99213 99211 3 ETSGLMLDVGPYMK 2 Oxidation (M) 1571.7211 0.72113089 4312 Q9H008 LHPP Phospholysine phosphohistidine inorganic pyrophosphate phosphatase yes yes 0 2 0 By MS/MS 2 0 1 1 75.31 70.37 2 0.0011213 88128 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.062 56.285 41148000 0 41148000 0 0 0 0 0 0 0 0 0 0 0 0 0 14929 4312 13600 124619 99214 99214 5775;5776 1 ETSGLMLDVGPYMK Oxidation (M) 1555.7262 0.72621627 4312 Q9H008 LHPP Phospholysine phosphohistidine inorganic pyrophosphate phosphatase yes yes 0 1 0 By MS/MS 2 0 1 1 80.549 75.837 2 9.769E-10 94410 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 111.86 97.162 61135000 0 61135000 0 0 0 0 0 0 0 0 0 0 0 0 0 14930 4312 13600 124620 99215 99215 5775;5776 1 ETSIFSYR Unmodified 1001.4818 0.48181054 867 P08581 MET Hepatocyte growth factor receptor yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 6.8345 6.9591 2 0.041224 4430 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.039 1.1912 22876000 0 0 0 0 2856700 1968500 1170000 1385300 1650300 0 0 2422300 5545500 2465600 3412300 14931 867 13601 124621;124622;124623;124624;124625;124626;124627;124628;124629 99216 99216 1 ETSLAENIWQEQPHSK Unmodified 1895.9014 0.90135517 413 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 64.033 63.946 3 0.0082472 73084 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 35.329 30.327 37948000 0 0 0 3041300 2272800 7715800 6527800 0 3166600 6576800 0 0 0 8647300 0 14932 413 13602 124630;124631;124632;124633;124634;124635;124636 99217;99218;99219;99220 99217 4 ETSLEETK Unmodified 935.44476 0.44475633 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 3.6 3.2 4 1 2 1 1 1 11.904 9.2959 2 0.01026 8747 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 80.229 46.679 100720000 59932000 35961000 1607500 0 0 0 0 0 0 0 3221700 0 0 0 0 14933 3119 13603 124637;124638;124639;124640;124641 99221;99222;99223 99223 3 ETSLHSPSNTSAPHSQGGIPPPTGI Unmodified 2468.1932 0.1931801 2614 Q16563 SYPL1 Synaptophysin-like protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 65.584 60.262 3 0.015185 76944 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 23.208 14.987 41588000 0 41588000 0 0 0 0 0 0 0 0 0 0 0 0 0 14934 2614 13604 124642;124643 99224 99224 1 ETSTEALMK Oxidation (M) 1024.4747 0.47467625 3208 Q86YP4 GATAD2A Transcriptional repressor p66-alpha yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 14.703 14.778 2 0.0053529 14345 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 70.525 48.754 31809000 0 0 0 4262200 0 4965800 3833400 3487800 4892400 5301300 0 0 5065900 0 0 14935 3208 13605 124644;124645;124646;124647;124648;124649;124650;124651;124652 99225;99226;99227;99228;99229;99230;99231;99232 99225 4826 8 ETSTEALMK Unmodified 1008.4798 0.47976163 3208 Q86YP4 GATAD2A Transcriptional repressor p66-alpha yes yes 0 0 0 By MS/MS 2 0 1 1 31.011 26.559 2 0.030391 34730 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.457 37.308 22354000 0 22354000 0 0 0 0 0 0 0 0 0 0 0 0 0 14936 3208 13605 124653 99233;99234;99235 99233 3 ETSTTVEEATTIVK Unmodified 1507.7617 0.76173337 3327 Q8N3X1 FNBP4 Formin-binding protein 4 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 56.393 56.52 2 0.004364 64306 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 45.829 35.305 8990500 0 0 0 0 0 0 3308400 0 0 5682100 0 0 0 0 0 14937 3327 13606 124654;124655;124656;124657 99236;99237;99238 99237 3 ETSVAIEVIEDTK Unmodified 1432.7297 0.72970496 3950 Q96PZ0 PUS7 Pseudouridylate synthase 7 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 80.371 75.686 2 6.8447E-47 94735 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 196.88 157.03 143970000 37304000 98524000 8139900 0 0 0 0 0 0 0 0 0 0 0 0 14938 3950 13607 124658;124659;124660;124661 99239;99240;99241;99242;99243 99239 4 ETSVDPDMRK Unmodified 1176.5445 0.54448715 1352 P35270 SPR Sepiapterin reductase yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.205 16.381 3 0.043169 15395 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 38.783 30.309 198200000 0 0 0 10557000 462170 12666000 11050000 13034000 11291000 19798000 23401000 26852000 21170000 23599000 24317000 14939 1352 13608 124662;124663;124664;124665;124666;124667;124668;124669;124670;124671;124672;124673 99244;99245;99246 99244 1 ETSVSKEDTDHEEK Unmodified 1632.7115 0.71148872 505 O75475 PSIP1 PC4 and SFRS1-interacting protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 2 2 1 1 1 2 1 12.715 12.876 3 0.00042901 4263 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.804 43.117 125350000 0 0 0 1881700 1629900 0 2263600 22078000 0 36582000 36514000 3727500 1527100 15914000 3227900 14940 505 13609 124674;124675;124676;124677;124678;124679;124680;124681;124682;124683;124684;124685;124686 99247;99248;99249;99250;99251;99252;99253 99253 7 ETTDTDTADQVIASFK Unmodified 1740.8054 0.8053891 356 O43707 ACTN4 Alpha-actinin-4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 77.389 77.446 2;3 1.079E-59 88897 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 174.9 157.99 1334600000 0 0 0 37016000 29532000 89671000 40559000 55301000 28527000 92740000 169650000 163140000 44596000 136250000 447650000 14941 356 13610 124687;124688;124689;124690;124691;124692;124693;124694;124695;124696;124697;124698;124699;124700;124701;124702;124703;124704;124705;124706;124707;124708;124709;124710 99254;99255;99256;99257;99258;99259;99260;99261;99262;99263;99264;99265;99266;99267;99268;99269;99270 99257 15 ETTEESIK Unmodified 935.44476 0.44475633 5118 Q9Y2T3 GDA Guanine deaminase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.88 2.98 1 7 1 1 1 1 1 1 1 1 10.05 10.226 2 0.0076113 8263 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.046 43.164 22169000 0 0 0 2667700 0 0 1392300 1111900 0 0 4821400 0 2193300 2404500 7578300 14942 5118 13611 124711;124712;124713;124714;124715;124716;124717;124718 99271;99272;99273;99274 99271 4 ETTESLHGDISSLK Unmodified 1515.7417 0.74166663 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 2 2 24 4 2 2 2 2 2 2 2 2 2 2 2 2 46.247 45.632 2;3 3.5731E-50 49954 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 168.85 116.59 947920000 0 186080000 0 35332000 42001000 53329000 56449000 60797000 49034000 77665000 59309000 87189000 72812000 82283000 85636000 14943 1364 13612 124719;124720;124721;124722;124723;124724;124725;124726;124727;124728;124729;124730;124731;124732;124733;124734;124735;124736;124737;124738;124739;124740;124741;124742;124743;124744;124745;124746 99275;99276;99277;99278;99279;99280;99281;99282;99283;99284;99285;99286;99287;99288;99289;99290;99291;99292;99293;99294;99295;99296;99297;99298;99299 99283 25 ETTEVDLLTK Unmodified 1147.5972 0.59723423 4879 Q9UG63 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 55.208 55.481 2 0.0049444 63318 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 83.998 59.179 97191000 0 0 0 0 0 10252000 9719800 0 8485300 12363000 0 15654000 12863000 11162000 16692000 14944 4879 13613 124747;124748;124749;124750;124751;124752;124753;124754 99300;99301;99302;99303;99304;99305;99306;99307 99302 8 ETTIDGEELVK Unmodified 1232.6136 0.61361257 1695 P52732 KIF11 Kinesin-like protein KIF11 yes yes 0 0 0 By MS/MS 2 0 1 1 55.635 49.82 2 0.00060971 64435 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.044 64.247 47992000 0 47992000 0 0 0 0 0 0 0 0 0 0 0 0 0 14945 1695 13614 124755 99308 99308 1 ETTNSMVESIK Unmodified 1237.586 0.58601761 3995 Q96SU4 OSBPL9 Oxysterol-binding protein-related protein 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.69 41.867 2 5.7562E-05 45498 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 114.4 79.044 120290000 0 0 0 5542600 5788900 7154400 4870200 7866200 7320100 11933000 17616000 18042000 9397700 8863300 15900000 14946 3995 13615 124756;124757;124758;124759;124760;124761;124762;124763;124764;124765;124766;124767 99309;99310;99311;99312;99313;99314;99315;99316;99317;99318 99312 10 ETTPFYPR Unmodified 1009.4869 0.48689592 411 O60547 GMDS GDP-mannose 4,6 dehydratase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 46.191 46.244 2 0.012884 51706 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 73.616 57.462 171890000 0 0 0 11577000 10481000 23136000 14179000 23972000 12981000 21744000 20895000 0 16517000 16408000 0 14947 411 13616 124768;124769;124770;124771;124772;124773;124774;124775;124776;124777;124778 99319;99320;99321;99322 99319 4 ETTQNALQTPCYTPYYVAPEVLGPEK Unmodified 2968.4164 0.41643968 2622 Q16644 MAPKAPK3 MAP kinase-activated protein kinase 3 yes yes 0 0 0 By MS/MS 2 0 1 1 90.434 85.537 3 5.7549E-09 106251 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.035 66.416 91414000 0 91414000 0 0 0 0 0 0 0 0 0 0 0 0 0 14948 2622 13617 124779 99323 99323 1 ETTRTEPINTTYSYTDFQK Unmodified 2294.0703 0.070270995 4725 Q9NXF7 DCAF16 DDB1- and CUL4-associated factor 16 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS 7 3.69 1 1 3 2 1 1 1 64.126 62.107 3 4.2047E-31 79484 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.44 114.52 72040000 0 54406000 0 0 0 0 0 0 0 6869800 0 0 5752500 5012000 0 14949 4725 13618 124780;124781;124782;124783;124784 99324;99325;99326 99324 3 ETTSGTSTEPVK Unmodified 1235.5881 0.5881261 4752 Q9NYV4 CDK12 Cyclin-dependent kinase 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.432 11.578 2 3.3155E-08 10820 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 126.31 97.914 155880000 0 0 0 11204000 9927800 15323000 12965000 8704300 12946000 0 12091000 19267000 17938000 18397000 17116000 14950 4752 13619 124785;124786;124787;124788;124789;124790;124791;124792;124793;124794;124795 99327;99328;99329;99330;99331;99332;99333;99334;99335;99336;99337 99327 10 ETTSHNSLTTPCYTPYYVAPEVLGPEK Unmodified 3053.4328 0.43281802 1560 P49137 MAPKAPK2 MAP kinase-activated protein kinase 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 85.876 82.251 3 4.5718E-07 102123 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 50.294 45.419 145400000 0 141100000 4292400 0 0 0 0 0 0 0 0 0 0 0 0 14951 1560 13620 124796;124797 99338;99339 99338 2 ETTTGYYK Unmodified 961.43928 0.43927702 1446 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.521 15.691 2 0.013011 14824 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 73.324 60.116 638900000 0 0 0 30282000 36128000 32010000 48570000 43681000 36334000 66537000 57698000 90089000 54826000 59455000 83290000 14952 1446 13621 124798;124799;124800;124801;124802;124803;124804;124805;124806;124807;124808;124809 99340;99341;99342;99343;99344;99345 99341 6 ETTVGAVTVTHK Unmodified 1241.6616 0.66156582 5238 Q9Y5L0 TNPO3 Transportin-3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 9.25 2.26 1 1 18 2 1 1 1 1 2 2 2 1 2 1 2 2 26.567 26.356 2;3 0.0063596 28282 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 51.436 35.774 188320000 0 46531000 0 2802600 2442400 5502200 4308100 13870000 10213000 21963000 4524800 30297000 4732400 17779000 23357000 14953 5238 13622 124810;124811;124812;124813;124814;124815;124816;124817;124818;124819;124820;124821;124822;124823;124824;124825;124826;124827;124828;124829 99346;99347;99348;99349 99349 4 ETTYYDVLGVK Unmodified 1286.6394 0.63943339 1303 P31689 DNAJA1 DnaJ homolog subfamily A member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 73.681 73.803 2 0.0025968 84648 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 66.962 58.099 200890000 0 0 0 0 6989300 27770000 6184600 8473900 16292000 19519000 25515000 20931000 16864000 20300000 32056000 14954 1303 13623 124830;124831;124832;124833;124834;124835;124836;124837;124838;124839;124840 99350;99351;99352;99353;99354;99355;99356;99357;99358;99359;99360 99354 11 ETTYYDVLGVKPNATQEELK Unmodified 2297.1427 0.14270766 1303 P31689 DNAJA1 DnaJ homolog subfamily A member 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 4 1 1 1 1 1 1 1 1 1 1 1 1 1 76.929 75.867 2;3 0 93948 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 270.97 218.4 1403600000 0 829980000 19002000 12617000 20023000 54819000 29186000 30181000 28268000 59208000 57755000 64580000 29260000 42387000 126350000 14955 1303 13624 124841;124842;124843;124844;124845;124846;124847;124848;124849;124850;124851;124852;124853;124854;124855;124856;124857 99361;99362;99363;99364;99365;99366;99367;99368;99369;99370;99371;99372;99373;99374;99375;99376;99377;99378;99379;99380;99381 99367 21 ETTYYDVLGVKPNATQEELKK Unmodified 2425.2377 0.23767067 1303 P31689 DNAJA1 DnaJ homolog subfamily A member 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 2 2 2 1 2 1 2 2 1 69.525 69.601 3;4 0.00054329 79899 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 45.844 37.852 136280000 0 0 0 5365000 7454700 0 10129000 16068000 4175800 22239000 6928300 37315000 16555000 0 10051000 14956 1303 13625 124858;124859;124860;124861;124862;124863;124864;124865;124866;124867;124868;124869;124870;124871;124872;124873 99382;99383;99384;99385 99384 3 ETVDQVEELRR Unmodified 1372.6947 0.69465686 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 39.985 40.164 2;3 0.0044991 44620 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 81.594 44.119 976630000 0 0 0 61939000 49976000 99812000 54274000 64861000 58742000 90246000 86510000 128410000 82089000 86016000 113760000 14957 2392 13626 124874;124875;124876;124877;124878;124879;124880;124881;124882;124883;124884;124885;124886;124887;124888;124889;124890;124891;124892;124893;124894;124895;124896;124897 99386;99387;99388;99389;99390;99391;99392;99393 99388 6 ETVEEQVSTTER Unmodified 1406.6525 0.65251728 2331 Q13619 CUL4A Cullin-4A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.278 31.454 2 6.225E-54 33825 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 215.56 168.36 286200000 0 0 0 14428000 11522000 38317000 19928000 18244000 13059000 27145000 33052000 32935000 0 26672000 50895000 14958 2331 13627 124898;124899;124900;124901;124902;124903;124904;124905;124906;124907;124908;124909 99394;99395;99396;99397;99398;99399;99400;99401;99402;99403;99404;99405 99403 12 ETVEQLQAK Unmodified 1044.5451 0.54513908 2729 Q5HYJ3 FAM76B Protein FAM76B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 25.083 25.404 2 0.0030679 26779 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 91.9 12.784 23832000 0 0 0 0 0 0 0 0 0 8508600 6815200 0 0 8507900 0 14959 2729 13628 124910;124911;124912 99406;99407;99408 99407 3 ETVLENNELEK Unmodified 1316.646 0.64597533 589 O94822 LTN1 E3 ubiquitin-protein ligase listerin yes yes 0 0 0 By MS/MS 2 0 1 1 47.709 42.146 2 0.00129 55008 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.135 66.105 40674000 0 40674000 0 0 0 0 0 0 0 0 0 0 0 0 0 14960 589 13629 124913 99409 99409 1 ETVNALISDQK Unmodified 1216.6299 0.62993134 3061 Q7LBC6 KDM3B Lysine-specific demethylase 3B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.377 49.535 2 5.9748E-28 54681 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 174.8 143.38 598890000 0 0 0 35286000 35608000 55966000 36533000 38562000 29085000 55361000 67407000 65658000 55068000 57294000 67057000 14961 3061 13630 124914;124915;124916;124917;124918;124919;124920;124921;124922;124923;124924;124925 99410;99411;99412;99413;99414;99415;99416;99417;99418;99419;99420;99421;99422;99423;99424 99414 15 ETVNVITLYK Unmodified 1178.6547 0.65468953 4063 Q99816 TSG101 Tumor susceptibility gene 101 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.505 72.575 2 0.0021587 83506 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 98.033 63.944 201550000 0 0 0 8466800 10128000 16849000 17502000 11942000 13991000 23800000 18610000 25904000 11333000 12276000 30747000 14962 4063 13631 124926;124927;124928;124929;124930;124931;124932;124933;124934;124935;124936;124937 99425;99426;99427;99428;99429;99430;99431;99432;99433;99434;99435 99434 10 ETVPTLAPK Unmodified 954.5386 0.53859714 3570 Q8WW12 PCNP PEST proteolytic signal-containing nuclear protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 43.532 42.924 2 0.012004 47830 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 61.962 46.33 585670000 29044000 0 0 37934000 0 0 0 41023000 0 50548000 76065000 107500000 50006000 70056000 123500000 14963 3570 13632 124938;124939;124940;124941;124942;124943;124944;124945;124946 99436;99437;99438;99439;99440;99441;99442;99443;99444 99437 8 ETVQTTEDQILK Unmodified 1403.7144 0.71438925 1073 P18206 VCL Vinculin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.56 3.64 1 2 2 11 3 2 1 1 1 1 1 1 1 1 1 1 1 52.038 50.461 2 4.0161E-81 56302 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 200.09 159.06 725740000 52413000 191300000 0 16245000 0 56904000 16470000 13890000 0 33511000 72862000 63426000 28485000 44362000 135880000 14964 1073 13633 124947;124948;124949;124950;124951;124952;124953;124954;124955;124956;124957;124958;124959;124960;124961;124962 99445;99446;99447;99448;99449;99450;99451;99452;99453;99454;99455;99456;99457;99458;99459;99460;99461 99449 17 ETVQTTQSPTPVEK Unmodified 1543.773 0.77296676 5050 Q9UPN6 SCAF8 Protein SCAF8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.243 28.438 2 9.9262E-50 30271 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 174.87 144.31 122410000 0 0 0 6588800 8211400 6333000 8983900 8035300 7731200 10257000 15391000 15136000 11308000 11179000 13255000 14965 5050 13634 124963;124964;124965;124966;124967;124968;124969;124970;124971;124972;124973;124974 99462;99463;99464;99465;99466;99467;99468;99469;99470;99471;99472;99473 99467 12 ETVREAEAASIK Unmodified 1302.6779 0.67794416 1073 P18206 VCL Vinculin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.86 3.49 5 1 16 1 3 2 1 1 2 1 1 1 2 2 2 1 2 28.347 27.346 2;3 2.0877E-23 34656 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 146.16 80.858 1576800000 26781000 435980000 985930000 3305400 4005500 13636000 4818600 4386500 2765600 14184000 18789000 15463000 0 7002000 39725000 14966 1073 13635 124975;124976;124977;124978;124979;124980;124981;124982;124983;124984;124985;124986;124987;124988;124989;124990;124991;124992;124993;124994;124995;124996 99474;99475;99476;99477;99478;99479;99480;99481;99482;99483;99484;99485;99486;99487 99485 14 ETVSEAPPLLFSDEEEK Unmodified 1918.9048 0.9047688 2840;5195 Q641Q2;Q9Y4E1 FAM21A;FAM21C WASH complex subunit FAM21A;WASH complex subunit FAM21C no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 81.109 80.08 2 2.42E-18 98908 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.56 94.182 303440000 17383000 159690000 0 5229400 5978000 9019200 7454700 8155700 6798500 12551000 12457000 15917000 11138000 12848000 18817000 14967 2840;5195 13636 124997;124998;124999;125000;125001;125002;125003;125004;125005;125006;125007;125008;125009;125010;125011 99488;99489;99490;99491;99492;99493;99494;99495;99496;99497;99498;99499;99500 99490 13 ETVSEESNVLCLSK Unmodified 1593.7556 0.75560214 980 P13639 EEF2 Elongation factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.259 62.356 2 1.4398E-32 70578 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 191.53 179.81 729090000 0 0 0 24810000 15610000 25796000 21665000 16538000 14341000 29503000 98962000 107980000 28075000 78226000 267590000 14968 980 13637 125012;125013;125014;125015;125016;125017;125018;125019;125020;125021;125022;125023 99501;99502;99503;99504;99505;99506;99507;99508;99509;99510;99511;99512 99503 12 ETVSQRPGATVPTDFATFPSSAFLR Unmodified 2681.3449 0.34492971 2391 Q14203 DCTN1 Dynactin subunit 1 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 87.717 87.847 3 4.7923E-08 101869 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 49.765 42.967 21434000 0 0 0 0 0 0 0 0 0 6815100 0 0 0 0 14619000 14969 2391 13638 125024;125025 99513;99514;99515 99514 3 ETVTPGPNFQER Unmodified 1373.6575 0.65754307 4538 Q9NP74 PALMD Palmdelphin yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 43.842 44.059 2 0.00022917 49363 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 83.869 76.219 46219000 0 0 0 0 5817500 5400200 0 0 0 0 9936100 0 9164600 0 15900000 14970 4538 13639 125026;125027;125028;125029;125030;125031 99516;99517;99518;99519;99520 99518 4 ETVTQLQNIIEANSQHYQK Unmodified 2243.1182 0.11822424 3242 Q8IWJ2 GCC2 GRIP and coiled-coil domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.25 3.34 2 1 1 2 1 1 81.827 79.262 3 0.0012899 90974 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.513 36.535 48441000 0 32593000 4339700 0 0 0 0 0 0 0 0 0 0 0 11509000 14971 3242 13640 125032;125033;125034;125035 99521;99522;99523 99521 3 ETVVEEPVDITPYLDQLDESLRDK Unmodified 2802.3811 0.38110003 2860 Q68E01 INTS3 Integrator complex subunit 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 97.862 92.747 3 5.839E-57 116034 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.33 119.81 133510000 90442000 34298000 8774600 0 0 0 0 0 0 0 0 0 0 0 0 14972 2860 13641 125036;125037;125038 99524;99525;99526 99524 3 ETVYCIGQRK Unmodified 1252.6234 0.62340617 1035 P16333 NCK1 Cytoplasmic protein NCK1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 34.02 29.21 3 0.043459 37099 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 44.203 31.247 48742000 43508000 0 5234600 0 0 0 0 0 0 0 0 0 0 0 0 14973 1035 13642 125039;125040 99527 99527 0 ETVYCLNDDDETEVLK Unmodified 1941.8514 0.85135302 974 P13010 XRCC5 X-ray repair cross-complementing protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.65 3.68 2 1 2 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 75.917 75.572 2 1.4228E-113 81448 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 203.11 191.53 1351800000 31296000 822630000 0 20582000 22326000 42889000 26619000 23816000 19882000 38932000 49911000 58642000 39281000 44010000 110960000 14974 974 13643 125041;125042;125043;125044;125045;125046;125047;125048;125049;125050;125051;125052;125053;125054;125055;125056;125057 99528;99529;99530;99531;99532;99533;99534;99535;99536;99537;99538;99539;99540;99541;99542;99543 99530 16 ETVYNLREENR Unmodified 1421.6899 0.68990583 158 O00461 GOLIM4 Golgi integral membrane protein 4 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 31.551 31.798 3 0.0090121 34616 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 46.592 35.687 68329000 0 0 0 0 5606500 0 5773400 6346200 5214400 7517200 10861000 17222000 0 0 9789100 14975 158 13644 125058;125059;125060;125061;125062;125063;125064;125065 99544;99545;99546 99545 3 ETYEALLAR Unmodified 1064.5502 0.55022446 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching 10 0 6 1 1 1 1 1 1 61.484 61.732 2 0.040497 70531 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 44.377 27.084 78022000 0 0 0 0 0 0 8579800 7900000 0 12444000 18035000 16685000 0 14378000 0 14976 643 13645 125066;125067;125068;125069;125070;125071 99547 99547 1 ETYGAFLQK Unmodified 1055.5288 0.52876073 5058 Q9UPT5 EXOC7 Exocyst complex component 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 53.74 53.732 2 0.017448 59415 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.676 33.184 54366000 0 0 0 8305700 10289000 0 0 0 0 0 0 0 11025000 12044000 12702000 14977 5058 13646 125072;125073;125074;125075;125076;125077 99548;99549;99550;99551;99552;99553;99554 99548 7 ETYGEMADCCAK Unmodified 1433.5261 0.52613625 64 CON__P02768-1;P02768 ALB Serum albumin yes no 0 0 0 By MS/MS 10 0 1 1 31.756 31.409 2 0.0016598 34471 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 66.056 66.056 + 11145000 0 0 0 11145000 0 0 0 0 0 0 0 0 0 0 0 14978 64 13647 125078 99555 99555 1 ETYLGPNEVLK Unmodified 1261.6554 0.65541781 4955 Q9UK61 FAM208A Protein FAM208A yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 68.157 62.864 2 0.0229 80375 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 57.267 27.458 31841000 0 31841000 0 0 0 0 0 0 0 0 0 0 0 0 0 14979 4955 13648 125079;125080 99556 99556 1 ETYNALTNWLTDAR Unmodified 1666.7951 0.79509919 1103 P20338 RAB4A Ras-related protein Rab-4A yes yes 0 0 0 By MS/MS 10 0 1 1 88.419 88.57 2 0.0041729 102488 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.802 49.972 2145600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2145600 14980 1103 13649 125081 99557 99557 1 ETYPNYLPLYVAR Unmodified 1597.814 0.81404372 1243 P29144 TPP2 Tripeptidyl-peptidase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 84.592 84.732 2 0.00025317 97840 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.645 72.99 29978000 0 0 0 0 0 0 0 0 0 0 5106000 5257800 2187100 5632900 11795000 14981 1243 13650 125082;125083;125084;125085;125086 99558;99559;99560;99561 99558 4 ETYQSCLK Unmodified 1027.4644 0.46444592 5241 Q9Y5N6 ORC6 Origin recognition complex subunit 6 yes yes 0 0 0 By MS/MS 10 0 1 1 22.586 22.752 2 0.025168 23855 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 58.917 8.7907 2065000 0 0 0 0 0 0 0 2065000 0 0 0 0 0 0 0 14982 5241 13651 125087 99562 99562 1 ETYVEQEQGENANDRNDR Unmodified 2165.921 0.920981 5110 Q9Y2L1 DIS3 Exosome complex exonuclease RRP44 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 20.351 20.651 3 9.1731E-30 21456 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 113.69 100.84 35661000 0 0 0 0 0 19851000 0 0 0 0 0 0 0 0 15810000 14983 5110 13652 125088;125089 99563;99564;99565 99563 3 ETYVHIMHNQK Oxidation (M) 1414.6663 0.66633362 4225 Q9BXI9 C1QTNF6 Complement C1q tumor necrosis factor-related protein 6 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 22.372 18.483 3 0.010507 26524 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.844 39.143 17816000 15895000 0 1920300 0 0 0 0 0 0 0 0 0 0 0 0 14984 4225 13653 125090;125091 99566 99566 5695 1 ETYVPAAESSSHQQSGLPPAK Unmodified 2183.0495 0.049475973 1699 P52756 RBM5 RNA-binding protein 5 yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 49.278 43.864 3 0.0024673 57536 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 37.884 29.663 50573000 0 50573000 0 0 0 0 0 0 0 0 0 0 0 0 0 14985 1699 13654 125092;125093;125094 99567;99568;99569 99568 3 EVAAGYLVPLLR Unmodified 1299.7551 0.75507227 2278 Q13395 TARBP1 Probable methyltransferase TARBP1 yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 89.306 89.413 2 0.004428 103599 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 57.59 38.319 21257000 0 0 0 0 1199800 0 0 1807300 1194300 2993700 2555600 2409300 1554900 2507100 5035300 14986 2278 13655 125095;125096;125097;125098;125099;125100;125101;125102;125103 99570 99570 1 EVAATEEDVTR Unmodified 1218.5728 0.57281039 3573 Q8WWI1 LMO7 LIM domain only protein 7 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 24.479 24.763 2 0.0067974 25158 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.649 35.024 21525000 0 0 0 0 0 2852600 3078800 0 0 1552600 2716900 0 3004300 2280000 6039500 14987 3573 13656 125104;125105;125106;125107;125108;125109;125110 99571;99572 99571 2 EVAATEEDVTRLPSPTSPFSSLSQDQAATSK Unmodified 3248.5685 0.56845988 3573 Q8WWI1 LMO7 LIM domain only protein 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 80.807 80.696 3 1.6236E-249 93073 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 210.68 200.62 166770000 0 0 2641900 0 9273600 12612000 5347700 11037000 11290000 25985000 19522000 23579000 6584100 11060000 27843000 14988 3573 13657 125111;125112;125113;125114;125115;125116;125117;125118;125119;125120;125121;125122 99573;99574;99575;99576;99577;99578;99579;99580;99581;99582;99583;99584;99585;99586 99576 14 EVADAIRLNEELK Unmodified 1498.7991 0.79912193 4110 Q9BRK5 SDF4 45 kDa calcium-binding protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 6.17 3.85 2 1 3 1 1 1 1 1 1 66.417 63.832 3 0.0070222 71929 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 30.998 8.97 65857000 11825000 14253000 23865000 0 0 0 0 0 0 0 5680200 0 0 3929400 6304500 14989 4110 13658 125123;125124;125125;125126;125127;125128 99587;99588;99589 99587 2 EVADEVTRPRPSGEEVLQDIQVMLK Unmodified 2837.4593 0.45930754 1333 P33992 MCM5 DNA replication licensing factor MCM5 yes yes 0 0 2 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 95.827 89.327 3;4 4.1867E-38 108992 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 95.957 90.074 121080000 116860000 4221500 0 0 0 0 0 0 0 0 0 0 0 0 0 14990 1333 13659 125129;125130;125131 99590;99591;99592 99590 3 EVAEATCNCLLAQAEQADK Unmodified 2119.9514 0.95141819 2893 Q6MZP7 LIN54 Protein lin-54 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 53.434 53.916 3 0.0043807 61057 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 33.308 29.187 41531000 0 0 0 0 0 0 0 0 0 0 9263100 13725000 0 8696200 9846600 14991 2893 13660 125132;125133;125134;125135 99593;99594;99595 99593 2 EVAEAYEVLSDPK Unmodified 1448.7035 0.70349021 4868 Q9UDY4 DNAJB4 DnaJ homolog subfamily B member 4 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 66.7 65.363 2 5.7011E-34 82110 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 176.95 141.3 423690000 32231000 275240000 3531200 5476700 4823400 5948300 5934100 9433500 6639300 8346700 12253000 13825000 7507900 11435000 21068000 14992 4868 13661 125136;125137;125138;125139;125140;125141;125142;125143;125144;125145;125146;125147;125148;125149;125150;125151;125152 99596;99597;99598;99599;99600;99601;99602;99603;99604;99605;99606;99607;99608;99609;99610;99611;99612;99613;99614;99615;99616;99617 99602 22 EVAELEANLPCTCK Unmodified 1632.7487 0.74874262 3721 Q969M7 UBE2F NEDD8-conjugating enzyme UBE2F yes yes 0 0 0 By MS/MS 2 0 1 1 68.774 62.874 2 0.016629 80166 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.121 50.754 17661000 0 17661000 0 0 0 0 0 0 0 0 0 0 0 0 0 14993 3721 13662 125153 99618 99618 1 EVAELTR Unmodified 816.43413 0.43413207 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 22.077 22.365 2 0.023899 23012 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 94.262 27.227 156060000 0 0 0 0 0 12042000 11518000 9991600 9978700 17664000 21695000 25684000 0 20363000 27122000 14994 2047 13663 125154;125155;125156;125157;125158;125159;125160;125161;125162 99619;99620 99619 2 EVAFFNNFLTDAK Unmodified 1514.7405 0.74054442 4230 Q9BXP5 SRRT Serrate RNA effector molecule homolog yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 91.163 90.634 2 1.9359E-08 113018 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.02 116.71 77612000 0 32983000 0 0 1387900 2866800 1489800 2334000 2161600 6311900 3799900 3258100 1874900 2509100 16635000 14995 4230 13664 125163;125164;125165;125166;125167;125168;125169;125170;125171;125172;125173;125174;125175 99621;99622;99623;99624;99625;99626;99627;99628;99629;99630 99623 10 EVAGLWIK Unmodified 914.52255 0.52255314 1064 P17900 GM2A Ganglioside GM2 activator;Ganglioside GM2 activator isoform short yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 70.514 70.534 2 0.026089 82286 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 58.167 28.361 56346000 0 0 0 23341000 4122100 2993500 2609900 5795200 0 0 4858800 6592200 2994700 3038900 0 14996 1064 13665 125176;125177;125178;125179;125180;125181;125182;125183;125184 99631 99631 1 EVAKPTEPDEHEAK Unmodified 1578.7526 0.75256567 4288 Q9C0D5 TANC1 Protein TANC1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 13.269 13.464 3 0.0058718 12907 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 41.621 20.561 23601000 0 0 0 0 0 3860200 0 0 0 3208200 0 0 5727500 3361800 7443400 14997 4288 13666 125185;125186;125187;125188;125189 99632;99633;99634;99635;99636 99636 5 EVANSTANLVK Unmodified 1144.6088 0.60880197 5187;5201 Q9Y490;Q9Y4G6 TLN1;TLN2 Talin-1;Talin-2 no no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.94 3.58 1 3 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37.898 37.447 2 4.4743E-11 41174 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 153.08 90.424 703740000 37216000 226280000 7735000 29299000 22080000 61824000 30029000 25605000 23663000 44848000 32597000 52061000 30653000 29832000 50024000 14998 5187;5201 13667 125190;125191;125192;125193;125194;125195;125196;125197;125198;125199;125200;125201;125202;125203;125204;125205 99637;99638;99639;99640;99641;99642;99643;99644;99645;99646;99647;99648;99649;99650;99651;99652;99653;99654;99655;99656;99657 99642 21 EVANVCNQSLMK Oxidation (M) 1407.6486 0.64863465 2167 Q08AM6 VAC14 Protein VAC14 homolog yes yes 0 1 0 By MS/MS 10 0 1 1 30.952 31.287 2 0.0015906 34255 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 63.184 21.308 18841000 0 0 0 0 0 0 0 0 0 0 0 0 18841000 0 0 14999 2167 13668 125206 99658 99658 3480 1 EVAPDGPLQESSTR Unmodified 1484.7107 0.71070086 2768 Q5T1M5 FKBP15 FK506-binding protein 15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.151 40.317 2 0.0003697 43673 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 80.979 64.347 74788000 0 0 0 4211600 3052600 0 5991600 5186600 4939200 8531200 0 13355000 9538800 8107800 11873000 15000 2768 13669 125207;125208;125209;125210;125211;125212;125213;125214;125215;125216;125217;125218 99659;99660;99661;99662;99663;99664;99665;99666;99667;99668;99669;99670 99666 10 EVAQSLLNAK Unmodified 1071.5924 0.59242362 3403 Q8NBT2 SPC24 Kinetochore protein Spc24 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.17 3.85 2 1 3 2 1 1 1 1 50.924 47.382 2 0.0012793 61414 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 111.74 44.57 283850000 0 265090000 2405700 0 0 0 0 0 0 0 16354000 0 0 0 0 15001 3403 13670 125219;125220;125221;125222;125223;125224 99671;99672;99673;99674;99675 99671 5 EVARLEAPLEELR Unmodified 1523.8308 0.83075641 2602 Q16401 PSMD5 26S proteasome non-ATPase regulatory subunit 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 2 1 1 1 1 1 73.555 73.627 3 0.0023866 84776 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 39.068 26.513 159500000 0 0 0 7077300 4984700 13672000 8066300 10385000 12198000 0 16944000 15248000 10460000 13932000 46537000 15002 2602 13671 125225;125226;125227;125228;125229;125230;125231;125232;125233;125234;125235;125236 99676;99677;99678;99679;99680;99681 99681 5 EVASNSELVQSSR Unmodified 1404.6845 0.68448611 70 CON__P08779;P08779 KRT16 Keratin, type I cytoskeletal 16 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 2 1 1 1 1 1 1 1 29.157 29.349 2 1.2632E-106 30441 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 247.54 121.48 + 3359300000 0 0 0 469190000 78643000 55688000 170410000 266810000 60338000 192260000 122120000 126720000 1617800000 120500000 78836000 15003 70 13672 125237;125238;125239;125240;125241;125242;125243;125244;125245;125246;125247;125248;125249 99682;99683;99684;99685;99686;99687;99688;99689;99690;99691;99692;99693;99694;99695;99696;99697 99691 16 EVASNTEMIQTSK Unmodified 1436.6817 0.68170891 76 CON__P19012;P19012 KRT15 Keratin, type I cytoskeletal 15 no no 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 33.877 33.804 2 9.6948E-13 37530 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 131.82 97.432 + 15948000 0 0 0 13745000 0 0 879150 1323700 0 0 0 0 0 0 0 15004 76 13673 125250;125251;125252 99698;99699 99699 2 EVASNTEMIQTSK Oxidation (M) 1452.6766 0.67662354 76 CON__P19012;P19012 KRT15 Keratin, type I cytoskeletal 15 no no 0 1 0 By MS/MS 10 0 1 1 21.721 21.56 2 0.00073036 22461 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 64.82 40.044 + 7492700 0 0 0 7492700 0 0 0 0 0 0 0 0 0 0 0 15005 76 13673 125253 99700 99700 107 1 EVASYQPLQRK Unmodified 1317.7041 0.70409934 3513 Q8TEA1 NSUN6 Putative methyltransferase NSUN6 yes yes 0 0 1 By MS/MS 2 0 1 1 37.655 31.157 3 0.023091 43457 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 36.528 18.719 6035400 6035400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15006 3513 13674 125254 99701 99701 0 EVATAIR Unmodified 758.42865 0.42865276 1027 P15880 RPS2 40S ribosomal protein S2 yes yes 0 0 0 By MS/MS 10 0 1 1 18.576 18.881 2 0.024641 19416 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 82.386 4.89 25330000 0 0 0 0 0 0 0 0 0 0 0 0 25330000 0 0 15007 1027 13675 125255 99702 99702 1 EVATDVFNSK Unmodified 1108.5401 0.5400537 651 O95379 TNFAIP8 Tumor necrosis factor alpha-induced protein 8 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 48.682 43.413 2 0.0083597 56296 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.862 63.731 83102000 0 83102000 0 0 0 0 0 0 0 0 0 0 0 0 0 15008 651 13676 125256;125257 99703;99704 99703 1 EVATDVRLLPQGTVIFEDISIEHFEGTVTK Unmodified 3342.7347 0.73473735 517 O75534 CSDE1 Cold shock domain-containing protein E1 yes yes 0 0 1 By MS/MS 2.33 0.471 2 1 3 98.221 91.63 3;4 4.4091E-50 116684 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.29 99.081 105670000 105670000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15009 517 13677 125258;125259;125260 99705;99706;99707 99706 3 EVATNSELVQSGK Unmodified 1360.6834 0.68342347 56;84 CON__P02533;P02533;CON__Q04695;Q04695 KRT14;KRT17 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 17 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.249 30.438 2 1.2491E-75 31847 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 196.48 154.37 + 2354500000 0 0 0 448080000 121840000 116580000 111240000 296250000 79431000 154520000 163310000 268000000 417780000 109300000 68188000 15010 56;84 13678 125261;125262;125263;125264;125265;125266;125267;125268;125269;125270;125271;125272 99708;99709;99710;99711;99712;99713;99714;99715;99716;99717;99718;99719;99720;99721 99716 14 EVATSLAYLPEWK Unmodified 1505.7766 0.77659558 5194 Q9Y4C2 TCAF1 TRPM8 channel-associated factor 1 yes yes 0 0 0 By MS/MS 2 0 1 1 90.204 85.307 2 0.0018597 105954 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.22 75.478 57802000 0 57802000 0 0 0 0 0 0 0 0 0 0 0 0 0 15011 5194 13679 125273 99722 99722 1 EVCFTIENK Unmodified 1138.5329 0.53285983 3039 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 58.073 52.103 2 0.00059599 67309 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.26 108.08 240740000 14583000 223330000 2823600 0 0 0 0 0 0 0 0 0 0 0 0 15012 3039 13680 125274;125275;125276 99723 99723 1 EVCGFAPYERR Unmodified 1382.6401 0.64011887 5177 Q9Y3U8 RPL36 60S ribosomal protein L36 yes yes 0 0 1 By MS/MS 10 0 1 1 41.942 42.696 3 0.0022731 47239 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 45.077 29.448 6568800 0 0 0 0 0 0 0 0 0 0 0 6568800 0 0 0 15013 5177 13681 125277 99724 99724 1 EVDAEYEAR Unmodified 1080.4724 0.47236807 3358 Q8N6H7 ARFGAP2 ADP-ribosylation factor GTPase-activating protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 21.453 21.661 2 0.0031269 21369 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.064 79.553 204910000 0 0 0 9346300 9248600 14048000 14167000 0 9512500 25716000 26708000 23743000 23504000 22106000 26811000 15014 3358 13682 125278;125279;125280;125281;125282;125283;125284;125285;125286;125287;125288 99725;99726;99727;99728;99729;99730;99731;99732;99733;99734;99735;99736 99728 11 EVDALLHLAR Unmodified 1135.635 0.63495714 4199 Q9BW19 KIFC1 Kinesin-like protein KIFC1 yes yes 0 0 0 By MS/MS 10 0 1 1 68.871 69.365 2 0.012302 79088 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.716 29.645 4515700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4515700 15015 4199 13683 125289 99737 99737 1 EVDATSPAPSTSSTVK Unmodified 1575.7628 0.76279601 2627 Q16666 IFI16 Gamma-interferon-inducible protein 16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30.196 29.909 2 5.5851E-113 31468 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 198.57 167.15 341750000 4645300 0 0 18444000 15739000 19544000 23179000 18084000 17339000 34352000 32669000 30181000 38125000 31106000 58347000 15016 2627 13684 125290;125291;125292;125293;125294;125295;125296;125297;125298;125299;125300;125301;125302;125303 99738;99739;99740;99741;99742;99743;99744;99745;99746;99747;99748;99749;99750;99751;99752;99753 99742 16 EVDDFFEQEK Unmodified 1284.551 0.55101232 5254 Q9Y5X3 SNX5 Sorting nexin-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61.929 61.001 2 0.0018817 69890 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 96.668 58.508 369410000 19235000 224140000 0 7084500 5744100 11890000 5414700 12732000 5369600 12766000 11751000 13137000 10596000 9741200 19805000 15017 5254 13685 125304;125305;125306;125307;125308;125309;125310;125311;125312;125313;125314;125315;125316;125317 99754;99755;99756;99757;99758;99759;99760;99761;99762;99763;99764;99765;99766;99767;99768 99763 14 EVDDLGPEVGDIK Unmodified 1384.6722 0.67219008 295 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 63.559 63.628 2 0.00091759 72712 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 68.132 46.668 33689000 0 0 0 3076700 2342600 0 4415500 0 0 0 5216400 6447700 0 4406400 7783900 15018 295 13686 125318;125319;125320;125321;125322;125323;125324;125325 99769;99770;99771;99772;99773;99774;99775;99776 99774 8 EVDDLTAELK Unmodified 1131.5659 0.5659341 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.53 2.94 1 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 59.865 58.62 2 1.3788E-09 67229 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 141.48 76.228 333880000 32754000 5489500 0 18276000 16155000 28650000 21642000 17707000 17588000 29475000 38267000 0 28656000 29702000 49521000 15019 4634 13687 125326;125327;125328;125329;125330;125331;125332;125333;125334;125335;125336;125337;125338;125339;125340 99777;99778;99779;99780;99781;99782;99783;99784;99785;99786;99787;99788;99789;99790;99791;99792;99793;99794 99779 16 EVDDVLGGAAAWENVDSTAESCPK Unmodified 2519.1122 0.11221216 5129 Q9Y2Y1 POLR3K DNA-directed RNA polymerase III subunit RPC10 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 84.71 80.71 3 3.0368E-25 100171 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.35 92.5 35412000 0 35412000 0 0 0 0 0 0 0 0 0 0 0 0 0 15020 5129 13688 125341;125342 99795;99796;99797 99795 3 EVDEDFDSK Unmodified 1082.4404 0.44039923 3770 Q96C19 EFHD2 EF-hand domain-containing protein D2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.88 3.69 2 2 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 35.073 34.739 2 0.0031884 25603 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 92.653 84.235 504970000 48444000 124650000 0 24575000 14485000 20400000 23483000 14306000 14661000 27803000 35105000 44960000 24004000 29058000 59036000 15021 3770 13689 125343;125344;125345;125346;125347;125348;125349;125350;125351;125352;125353;125354;125355;125356;125357;125358 99798;99799;99800;99801;99802;99803;99804;99805;99806;99807;99808;99809;99810;99811;99812;99813;99814;99815;99816;99817;99818;99819;99820 99816 22 EVDEDSEPEREVR Unmodified 1587.7013 0.70125838 2702 Q53GS9 USP39 U4/U6.U5 tri-snRNP-associated protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 21.198 21.447 3 0.00012632 22130 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 83.617 73.132 62027000 0 0 0 4799300 0 6764200 5685200 3293600 4121800 4072200 6083500 7876000 6386000 5189800 7755800 15022 2702 13690 125359;125360;125361;125362;125363;125364;125365;125366;125367;125368;125369 99821;99822;99823;99824;99825;99826;99827;99828;99829;99830;99831;99832;99833;99834 99822 14 EVDEGPSPPEQFTAVK Unmodified 1728.8206 0.82064524 2404 Q14331 FRG1 Protein FRG1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 61.729 61.805 2 1.4453E-07 70827 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 84.289 80.757 105050000 0 0 0 6642000 7809400 9596300 7835900 7749300 5548700 12104000 0 13770000 7990700 11121000 14883000 15023 2404 13691 125370;125371;125372;125373;125374;125375;125376;125377;125378;125379;125380 99835;99836;99837;99838;99839;99840;99841;99842;99843;99844;99845;99846 99842 12 EVDEQMLAIQSK Oxidation (M) 1405.6759 0.67589525 4160;2306 Q13509;Q9BUF5 TUBB3;TUBB6 Tubulin beta-3 chain;Tubulin beta-6 chain no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.61 3.11 1 2 15 2 1 1 1 2 1 1 1 1 2 1 1 2 1 46.367 46.102 2 2.7781E-43 47401 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 180.19 144.9 760460000 24317000 57221000 0 36388000 34040000 76967000 43229000 36561000 31360000 52277000 99269000 62805000 69048000 84164000 52812000 15024 2306;4160 13692 125381;125382;125383;125384;125385;125386;125387;125388;125389;125390;125391;125392;125393;125394;125395;125396;125397;125398 99847;99848;99849;99850;99851;99852;99853;99854;99855;99856;99857;99858;99859;99860;99861;99862 99859 3770 16 EVDEQMLAIQSK Unmodified 1389.681 0.68098063 4160;2306 Q13509;Q9BUF5 TUBB3;TUBB6 Tubulin beta-3 chain;Tubulin beta-6 chain no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.91 3.42 2 1 8 1 2 1 2 1 1 1 1 1 59.673 57.812 2 8.4643E-34 66394 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 172.1 98.598 1651200000 20561000 807060000 0 0 71773000 123980000 89921000 0 92714000 148590000 0 0 142760000 153880000 0 15025 2306;4160 13692 125399;125400;125401;125402;125403;125404;125405;125406;125407;125408;125409 99863;99864;99865;99866;99867;99868;99869;99870;99871 99870 8 EVDEQMLNVQNK Oxidation (M) 1461.677 0.67695789 1963;842;2350;4182 P07437;P68371;Q13885;Q9BVA1 TUBB;TUBB4B;TUBB2A;TUBB2B Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.3 2.26 2 11 3 165 6 8 2 9 10 13 13 16 13 18 12 15 16 15 15 38.518 38.392 2;3 5.3306E-157 35252 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 228.41 171.5 29234000000 1207300000 982890000 18100000 1659200000 1687500000 2178300000 2179600000 2204700000 1761600000 2584500000 2709100000 3146400000 2525200000 2049300000 2339800000 15026 842;1963;2350;4182 13693 125410;125411;125412;125413;125414;125415;125416;125417;125418;125419;125420;125421;125422;125423;125424;125425;125426;125427;125428;125429;125430;125431;125432;125433;125434;125435;125436;125437;125438;125439;125440;125441;125442;125443;125444;125445;125446;125447;125448;125449;125450;125451;125452;125453;125454;125455;125456;125457;125458;125459;125460;125461;125462;125463;125464;125465;125466;125467;125468;125469;125470;125471;125472;125473;125474;125475;125476;125477;125478;125479;125480;125481;125482;125483;125484;125485;125486;125487;125488;125489;125490;125491;125492;125493;125494;125495;125496;125497;125498;125499;125500;125501;125502;125503;125504;125505;125506;125507;125508;125509;125510;125511;125512;125513;125514;125515;125516;125517;125518;125519;125520;125521;125522;125523;125524;125525;125526;125527;125528;125529;125530;125531;125532;125533;125534;125535;125536;125537;125538;125539;125540;125541;125542;125543;125544;125545;125546;125547;125548;125549;125550;125551;125552;125553;125554;125555;125556;125557;125558;125559;125560;125561;125562;125563;125564;125565;125566;125567;125568;125569;125570;125571;125572;125573;125574;125575;125576;125577;125578;125579;125580;125581;125582;125583;125584;125585;125586;125587;125588;125589;125590 99872;99873;99874;99875;99876;99877;99878;99879;99880;99881;99882;99883;99884;99885;99886;99887;99888;99889;99890;99891;99892;99893;99894;99895;99896;99897;99898;99899;99900;99901;99902;99903;99904;99905;99906;99907;99908;99909;99910;99911;99912;99913;99914;99915;99916;99917;99918;99919;99920;99921;99922;99923;99924;99925;99926;99927;99928;99929;99930;99931;99932;99933;99934;99935;99936;99937;99938;99939;99940;99941;99942;99943;99944;99945;99946;99947;99948;99949;99950;99951;99952;99953;99954;99955;99956;99957;99958;99959;99960;99961;99962;99963;99964;99965;99966;99967;99968;99969;99970;99971;99972;99973;99974;99975;99976;99977;99978;99979;99980;99981;99982;99983;99984;99985;99986;99987;99988;99989;99990;99991;99992;99993;99994;99995;99996;99997;99998;99999;100000;100001;100002;100003;100004;100005;100006;100007;100008;100009;100010;100011;100012;100013;100014;100015;100016;100017;100018;100019;100020;100021;100022;100023;100024;100025;100026;100027;100028;100029;100030;100031;100032;100033;100034;100035;100036;100037;100038;100039;100040;100041;100042;100043;100044;100045 100018 1039 156 EVDEQMLNVQNK Unmodified 1445.682 0.68204326 1963;842;2350;4182 P07437;P68371;Q13885;Q9BVA1 TUBB;TUBB4B;TUBB2A;TUBB2B Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.19 3.35 1 5 1 24 4 2 1 2 2 2 2 2 2 2 2 2 2 2 2 51.322 50.363 2;3 4.2589E-260 53645 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 253.05 214.96 32462000000 883910000 2190000000 14485000 1541900000 1942200000 2095800000 1657800000 2409500000 1702100000 2403800000 2734800000 3709800000 2132800000 2492200000 4551000000 15027 842;1963;2350;4182 13693 125591;125592;125593;125594;125595;125596;125597;125598;125599;125600;125601;125602;125603;125604;125605;125606;125607;125608;125609;125610;125611;125612;125613;125614;125615;125616;125617;125618;125619;125620;125621 100046;100047;100048;100049;100050;100051;100052;100053;100054;100055;100056;100057;100058;100059;100060;100061;100062;100063;100064;100065;100066;100067;100068;100069;100070;100071;100072;100073;100074;100075;100076;100077;100078;100079;100080;100081;100082;100083;100084;100085;100086;100087;100088;100089;100090 100075 34 EVDEVDAALSDLEITLEGGK Unmodified 2102.0267 0.026674846 3735 Q96AC1 FERMT2 Fermitin family homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.43 0.495 4 3 3 3 1 100.16 95.808 2;3 6.6616E-92 118997 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 162.77 147.51 177690000 43669000 130750000 3273500 0 0 0 0 0 0 0 0 0 0 0 0 15028 3735 13694 125622;125623;125624;125625;125626;125627;125628 100091;100092;100093;100094;100095;100096;100097;100098 100097 7 EVDGEGKPYYEVRLASVLGSEPSLDSEVTSK Unmodified 3339.6358 0.63581116 4737 Q9NY33 DPP3 Dipeptidyl peptidase 3 yes yes 0 0 2 By MS/MS 2 0 1 1 90.58 82.449 4 0.0070769 107097 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 23.571 13.149 7314400 7314400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15029 4737 13695 125629 100099 100099 1 EVDGLDVSK Unmodified 960.47639 0.47639081 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.5 3.71 5 11 2 2 1 1 1 1 1 1 1 1 1 1 1 1 33.77 33.233 2 0.0074981 44018 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.948 46.05 550110000 22529000 75954000 194200 0 23804000 38234000 32402000 28016000 20727000 34904000 61662000 67384000 48334000 41658000 54304000 15030 2392 13696 125630;125631;125632;125633;125634;125635;125636;125637;125638;125639;125640;125641;125642;125643;125644;125645 100100;100101;100102;100103;100104;100105;100106;100107;100108;100109;100110;100111 100105 10 EVDGLLTSEPMGSPVSSK Oxidation (M) 1847.8823 0.88225921 3576 Q8WWM7 ATXN2L Ataxin-2-like protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 64.462 64.551 2 3.6387E-11 73197 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.087 73.525 79761000 0 0 0 4442400 5481500 4352700 5854500 3863000 5272600 8957000 8112100 10203000 7975800 5793200 9453600 15031 3576 13697 125646;125647;125648;125649;125650;125651;125652;125653;125654;125655;125656;125657;125658 100112;100113;100114;100115;100116;100117;100118;100119;100120;100121;100122;100123;100124;100125 100116 5068 14 EVDGLLTSEPMGSPVSSK Unmodified 1831.8873 0.88734459 3576 Q8WWM7 ATXN2L Ataxin-2-like protein yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 1 1 6 2 1 1 1 1 1 1 75.379 74.348 2 1.5347E-07 86166 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 89.507 73.617 130960000 0 98071000 0 0 0 0 3737400 0 4676000 0 6389400 0 0 8896700 9187900 15032 3576 13697 125659;125660;125661;125662;125663;125664;125665;125666 100126;100127;100128;100129;100130;100131 100126 6 EVDIGIPDATGR Unmodified 1241.6252 0.62518031 1755 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 65.034 65.267 2 3.1146E-06 75510 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 111.65 82.565 26153000 0 0 0 0 0 3615700 2342100 2357500 0 0 6530600 0 0 0 11307000 15033 1755 13698 125667;125668;125669;125670;125671;125672;125673;125674;125675;125676 100132;100133;100134;100135;100136;100137;100138;100139 100138 8 EVDILNLPESELSTK Unmodified 1685.8723 0.87234646 1248 P29374 ARID4A AT-rich interactive domain-containing protein 4A yes yes 0 0 0 By MS/MS 2 0 1 1 90.332 85.436 2 1.4957E-22 106194 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.71 93.506 16060000 0 16060000 0 0 0 0 0 0 0 0 0 0 0 0 0 15034 1248 13699 125677 100140 100140 1 EVDIYTVK Unmodified 965.50696 0.50696266 4069 Q99873;Q9NR22 PRMT1;PRMT8 Protein arginine N-methyltransferase 1;Protein arginine N-methyltransferase 8 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.65 3.66 1 3 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 52.491 51.326 2 0.02313 54315 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 60.59 33.065 1931100000 65978000 1568700000 16180000 5901000 6789700 7297000 6824100 9131700 7716700 18929000 44020000 34555000 14591000 26331000 98100000 15035 4069 13700 125678;125679;125680;125681;125682;125683;125684;125685;125686;125687;125688;125689;125690;125691;125692;125693;125694 100141;100142;100143;100144;100145;100146;100147;100148;100149;100150;100151 100141 8 EVDLSDIINTPLPR Unmodified 1580.841 0.84098675 1607 P49848 TAF6 Transcription initiation factor TFIID subunit 6 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 90.196 90.315 2 0.00037061 104573 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.548 72.522 5191800 0 0 0 0 0 0 0 0 0 1441300 0 0 0 1100900 2649600 15036 1607 13701 125695;125696;125697 100152;100153 100153 2 EVDLTRLSEK Unmodified 1188.635 0.63501672 3496 Q8TD19 NEK9 Serine/threonine-protein kinase Nek9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.5 0.5 2 2 1 2 1 52.059 46.604 2;3 0.0076349 57885 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 67.897 25.788 34453000 6959500 18807000 8686500 0 0 0 0 0 0 0 0 0 0 0 0 15037 3496 13702 125698;125699;125700;125701 100154;100155;100156 100155 1 EVDNFVDK Unmodified 964.45018 0.45017606 1538 P48444 ARCN1 Coatomer subunit delta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31.927 31.119 2 0.012113 38901 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.33 78.398 1013100000 35857000 707040000 1832600 10974000 11681000 27549000 19004000 12092000 14197000 24323000 29357000 34711000 18861000 21189000 44425000 15038 1538 13703 125702;125703;125704;125705;125706;125707;125708;125709;125710;125711;125712;125713;125714;125715;125716 100157;100158;100159;100160;100161;100162;100163;100164;100165;100166;100167;100168;100169 100160 12 EVDPQGLR Unmodified 912.46649 0.46649483 1630 P50570;Q9UQ16 DNM2;DNM3 Dynamin-2;Dynamin-3 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 26.582 26.888 2 0.0052859 28427 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 107.43 65.777 318900000 0 0 0 0 0 49658000 0 37410000 35622000 0 48443000 54803000 47532000 45433000 0 15039 1630 13704 125717;125718;125719;125720;125721;125722;125723;125724;125725 100170;100171;100172;100173;100174;100175;100176;100177;100178 100178 7 EVDPQGLRTIGVITK Unmodified 1624.9148 0.91482039 1630 P50570;Q9UQ16 DNM2;DNM3 Dynamin-2;Dynamin-3 yes no 0 0 1 By MS/MS By MS/MS By MS/MS 2.5 0.5 2 2 2 1 1 75.379 70.698 3 0.00022871 85640 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 74.769 49.804 66545000 19315000 15210000 32019000 0 0 0 0 0 0 0 0 0 0 0 0 15040 1630 13705 125726;125727;125728;125729 100179;100180;100181;100182 100180 4 EVDPQVNWAALVEEK Unmodified 1725.8574 0.85736509 399 O60437 PPL Periplakin yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 90.788 86.727 2 1.8414E-22 107879 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 154.67 105.93 34744000 0 34744000 0 0 0 0 0 0 0 0 0 0 0 0 0 15041 399 13706 125730;125731 100183 100183 1 EVDPSTGELQSLQMPESEGPSSLDPSQEGPTGLK Oxidation (M) 3541.6254 0.62538241 2303 Q13501 SQSTM1 Sequestosome-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.678 79.736 3 4.4808E-126 91882 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 127.4 124.01 402690000 0 0 0 8387100 33263000 26983000 25363000 21475000 26339000 45621000 43040000 58297000 38026000 31392000 44505000 15042 2303 13707 125732;125733;125734;125735;125736;125737;125738;125739;125740;125741;125742;125743 100184;100185;100186;100187;100188;100189;100190;100191;100192;100193;100194;100195 100187 3767 12 EVDPSTGELQSLQMPESEGPSSLDPSQEGPTGLK Unmodified 3525.6305 0.63046779 2303 Q13501 SQSTM1 Sequestosome-1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.72 2 13 1 1 1 1 1 1 1 2 2 1 1 2 84.067 83.268 3;4 3.8117E-97 96756 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 117.6 113.37 195850000 11178000 47440000 0 1259100 11134000 6157500 0 8674700 0 13053000 20825000 25295000 3466300 8595600 38770000 15043 2303 13707 125744;125745;125746;125747;125748;125749;125750;125751;125752;125753;125754;125755;125756;125757;125758 100196;100197;100198;100199;100200;100201;100202;100203;100204;100205;100206;100207;100208 100199 13 EVDQIELK Unmodified 972.51278 0.51277632 4661 Q9NV70 EXOC1 Exocyst complex component 1 yes yes 0 0 0 By MS/MS 2 0 1 1 45.743 40.422 2 0.01951 52471 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.794 16.269 32400000 0 32400000 0 0 0 0 0 0 0 0 0 0 0 0 0 15044 4661 13708 125759 100209 100209 1 EVDQREALK Unmodified 1086.5669 0.56693715 2555 Q15642 TRIP10 Cdc42-interacting protein 4 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 15.019 11.586 2 0.017603 15548 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.12 33.346 66715000 0 66715000 0 0 0 0 0 0 0 0 0 0 0 0 0 15045 2555 13709 125760;125761 100210 100210 0 EVDQSGEWFK Unmodified 1223.5459 0.54586736 2120 Q05BQ5 MBTD1 MBT domain-containing protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 54.358 54.581 2 0.0052778 61973 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 69.598 35.509 15979000 0 0 0 0 0 3327100 0 0 2947100 0 3995300 0 5709200 0 0 15046 2120 13710 125762;125763;125764;125765 100211;100212;100213 100213 3 EVDRNQELLTR Unmodified 1371.7106 0.71064128 5278 Q9Y6D9 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 30.479 30.656 3 0.00037507 33687 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 73.632 58.244 217500000 0 0 0 8696800 10605000 18552000 14423000 14883000 11128000 22485000 25664000 31044000 20139000 0 39882000 15047 5278 13711 125766;125767;125768;125769;125770;125771;125772;125773;125774;125775;125776 100214;100215;100216;100217;100218;100219;100220;100221 100221 6 EVDVGLAADVGTLQRLPK Unmodified 1880.0367 0.036726442 2223 Q13011 ECH1 Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial yes yes 0 0 1 By MS/MS 2 0 1 1 87.603 79.473 3 0.0002757 103460 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.203 56.04 15582000 15582000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15048 2223 13712 125777 100222 100222 1 EVDVNLPK Unmodified 912.49165 0.49164694 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 47.105 47.346 2 0.017367 52278 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 65.777 33.649 110540000 0 0 0 0 7860400 7010600 9448000 12240000 6934700 0 8896600 14729000 15155000 11025000 17246000 15049 2172 13713 125778;125779;125780;125781;125782;125783;125784;125785;125786;125787 100223;100224;100225;100226 100224 4 EVDYSDSLTEK Unmodified 1284.5721 0.57214169 1656 P51532 SMARCA4 Transcription activator BRG1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40.563 39.859 2 1.4613E-07 43629 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 147.4 139.93 264100000 8146800 11639000 0 16641000 11769000 19897000 18541000 12380000 12378000 27678000 23260000 36229000 21318000 17351000 26873000 15050 1656 13714 125788;125789;125790;125791;125792;125793;125794;125795;125796;125797;125798;125799;125800;125801 100227;100228;100229;100230;100231;100232;100233;100234;100235;100236;100237;100238;100239;100240;100241 100231 15 EVDYSGLR Unmodified 937.45051 0.45051041 4980 Q9UKY7 CDV3 Protein CDV3 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 38.785 33.818 2 0.0069202 44151 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.3 80.419 50553000 0 50553000 0 0 0 0 0 0 0 0 0 0 0 0 0 15051 4980 13715 125802 100242 100242 1 EVDYSGLRVQAMQISSEKEEDDNEK Oxidation (M) 2914.3138 0.3138251 4980 Q9UKY7 CDV3 Protein CDV3 homolog yes yes 0 1 2 By MS/MS 2 0 1 1 67.963 59.668 4 5.9252E-08 79753 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.217 57.5 15812000 15812000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15052 4980 13716 125803 100243;100244 100243 6327 2 EVDYSGLRVQAMQISSEKEEDDNEK Unmodified 2898.3189 0.31891048 4980 Q9UKY7 CDV3 Protein CDV3 homolog yes yes 0 0 2 By MS/MS 2 0 2 2 75.985 67.855 3;4 5.3892E-18 89473 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.912 77.756 56050000 56050000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15053 4980 13716 125804;125805 100245;100246 100245 2 EVEAAQGVK Unmodified 929.48181 0.48181054 437 O60841 EIF5B Eukaryotic translation initiation factor 5B yes yes 0 0 0 By MS/MS 2 0 1 1 13.093 9.7984 2 0.0045578 13725 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.89 60.335 922300000 0 922300000 0 0 0 0 0 0 0 0 0 0 0 0 0 15054 437 13717 125806 100247;100248;100249 100247 3 EVEAGPGDQQGDSYLR Unmodified 1719.77 0.77000665 321 O43379 WDR62 WD repeat-containing protein 62 yes yes 0 0 0 By MS/MS 10 0 1 1 44.006 44.759 2 0.00015394 49691 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 83.314 56.528 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15055 321 13718 125807 100250 100250 1 EVEAIQAQAK Unmodified 1085.5717 0.57168818 241 O15020 SPTBN2 Spectrin beta chain, non-erythrocytic 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 24.166 24.271 2 0.019854 23920 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 47.574 17.071 194080000 0 0 0 51975000 0 0 0 53924000 0 0 0 0 0 88182000 0 15056 241 13719 125808;125809;125810 100251;100252;100253 100252 3 EVEAQLPEK Unmodified 1041.5342 0.53424004 1656 P51532 SMARCA4 Transcription activator BRG1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34.13 33.472 2 0.0035332 36965 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 89.752 65.12 192500000 9133000 23767000 0 11925000 9375200 15940000 8902000 9720400 9131500 16345000 14491000 20701000 12106000 12324000 18641000 15057 1656 13720 125811;125812;125813;125814;125815;125816;125817;125818;125819;125820;125821;125822;125823;125824 100254;100255;100256;100257;100258;100259;100260;100261;100262;100263 100261 10 EVEAVIPDHCIFASNTSALPISEIAAVSK Unmodified 3067.5536 0.55360186 1426 P40939 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 0 0 0 By MS/MS 3 0 1 1 95.8 92.545 3 2.6313E-05 110924 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 39.466 33.747 2991200 0 2991200 0 0 0 0 0 0 0 0 0 0 0 0 0 15058 1426 13721 125825 100264 100264 1 EVEDADEK Unmodified 933.39272 0.39272076 360 O43719 HTATSF1 HIV Tat-specific factor 1 yes yes 0 0 0 By MS/MS 1 0 1 1 106.76 112.02 2 0.089646 92778 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 74.127 35.155 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15059 360 13722 125826 100265 100265 1 EVEDKESEGEEEDEDEDLSK Unmodified 2338.9296 0.92959916 627 O95218 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 26.926 26.285 3 2.7993E-09 28316 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 75.589 75.022 89027000 20872000 15857000 0 4257100 3904400 0 3343300 7062100 0 3265400 5873700 11496000 5299500 3516800 4279700 15060 627 13723 125827;125828;125829;125830;125831;125832;125833;125834;125835;125836;125837;125838 100266;100267;100268;100269;100270;100271;100272;100273;100274;100275;100276;100277 100275 12 EVEDLSATLLCK Unmodified 1376.6857 0.68573166 2817 Q5VU43 PDE4DIP Myomegalin yes yes 0 0 0 By MS/MS 2 0 1 1 78.925 74.19 2 0.0048815 92411 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.509 52.769 114400000 0 114400000 0 0 0 0 0 0 0 0 0 0 0 0 0 15061 2817 13724 125839 100278 100278 1 EVEEDEYK Unmodified 1039.4346 0.43458558 1002 P14625 HSP90B1 Endoplasmin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.88 3.69 2 2 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 26.647 26.413 2 0.0047287 13517 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 113.5 103.03 1504700000 95646000 437780000 0 51763000 27659000 82841000 58264000 40588000 41145000 86951000 137460000 79705000 80952000 98571000 185330000 15062 1002 13725 125840;125841;125842;125843;125844;125845;125846;125847;125848;125849;125850;125851;125852;125853;125854;125855 100279;100280;100281;100282;100283;100284;100285;100286;100287;100288;100289;100290;100291;100292;100293;100294;100295 100291 17 EVEEEPGIHSLK Unmodified 1365.6776 0.67760981 5206 Q9Y4L1 HYOU1 Hypoxia up-regulated protein 1 yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 1 2 2 1 2 2 2 2 2 2 2 37.12 37.363 2;3 1.4372E-20 41190 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 163.88 125.79 257470000 0 0 0 8200700 7659500 24011000 10755000 8587200 8951400 22432000 29880000 33136000 17968000 23730000 62164000 15063 5206 13726 125856;125857;125858;125859;125860;125861;125862;125863;125864;125865;125866;125867;125868;125869;125870;125871;125872;125873;125874;125875;125876 100296;100297;100298;100299;100300;100301 100300 5 EVEELILTESK Unmodified 1288.6762 0.67621283 4278 Q9BZZ5 API5 Apoptosis inhibitor 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 7.39 3.7 5 1 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 69.173 67.237 2;3 1.8041E-60 78132 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 197.27 156.24 1742800000 78277000 884180000 10578000 43704000 41414000 96064000 50776000 52499000 54782000 94492000 79149000 99532000 63129000 1234100 93025000 15064 4278 13727 125877;125878;125879;125880;125881;125882;125883;125884;125885;125886;125887;125888;125889;125890;125891;125892;125893;125894 100302;100303;100304;100305;100306;100307;100308;100309;100310;100311;100312;100313;100314;100315;100316;100317;100318 100302 17 EVEELILTESKK Unmodified 1416.7712 0.77117585 4278 Q9BZZ5 API5 Apoptosis inhibitor 5 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 13 1 1 2 1 2 1 2 2 1 58.208 58.343 2;3 0.0073333 67101 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 85.377 56.651 143290000 0 0 0 10701000 3102800 0 23146000 8234400 10870000 15471000 24921000 35214000 11623000 0 0 15065 4278 13728 125895;125896;125897;125898;125899;125900;125901;125902;125903;125904;125905;125906;125907 100319;100320;100321;100322 100322 2 EVEENGIVLDPLK Unmodified 1453.7664 0.76642482 5242 Q9Y5P4 COL4A3BP Collagen type IV alpha-3-binding protein yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 77.67 77.752 2 0.0027751 90138 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 57.019 38.488 7408800 0 0 0 0 0 0 0 0 0 0 0 0 7408800 0 0 15066 5242 13729 125908;125909 100323;100324 100324 2 EVEENWSK Unmodified 1019.456 0.45598972 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 24.152 24.017 2 0.01524 24897 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 69.198 59.56 89068000 0 48228000 0 0 1435800 2967600 1895600 1820300 1610300 3832000 3901500 6148100 4041700 4585700 8601000 15067 2775 13730 125910;125911;125912;125913;125914;125915;125916;125917;125918;125919;125920;125921 100325;100326;100327;100328;100329;100330;100331;100332;100333 100329 9 EVEERPAPTPWGSK Unmodified 1581.7787 0.77872084 256 O15143 ARPC1B Actin-related protein 2/3 complex subunit 1B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 2 1 1 1 1 1 2 43.636 42.617 2;3 2.1431E-05 46567 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.734 37.73 328770000 39617000 76411000 51546000 5344700 7828000 7752000 7487100 6601100 0 10543000 27723000 0 12908000 22792000 52216000 15068 256 13731 125922;125923;125924;125925;125926;125927;125928;125929;125930;125931;125932;125933;125934;125935;125936 100334;100335;100336;100337;100338;100339;100340;100341;100342;100343;100344;100345;100346;100347;100348;100349;100350;100351 100341 17 EVEETATAK Unmodified 976.47131 0.47130543 4079 Q9BPX3 NCAPG Condensin complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 7.4114 7.1748 2 0.0043294 5484 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 87.181 8.5656 32269000 14732000 0 0 983150 1396500 2684700 2162100 2271000 1936500 1217400 0 0 1621600 1228000 2035600 15069 4079 13732 125937;125938;125939;125940;125941;125942;125943;125944;125945;125946;125947 100352;100353;100354;100355;100356;100357 100352 6 EVEETDEMDQVELVDFDPNQERRR Unmodified 2977.336 0.33595752 1303 P31689 DNAJA1 DnaJ homolog subfamily A member 1 yes yes 0 0 2 By MS/MS 2 0 1 1 82.301 74.171 4 2.0242E-14 97146 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.398 62.6 14959000 14959000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15070 1303 13733 125948 100358 100358 1 EVEFGGPAPR Unmodified 1057.5193 0.51925868 1592 P49750 YLPM1 YLP motif-containing protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 41.09 41.303 2 0.0066962 45188 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 64.265 52.624 15452000 0 0 0 0 0 0 2693400 0 0 5202900 0 0 4607500 2948000 0 15071 1592 13734 125949;125950;125951;125952 100359;100360;100361 100360 3 EVEGDDVPESIMLEMK 2 Oxidation (M) 1851.8118 0.81179639 2645 Q1KMD3 HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 1 2 2 1 2 2 2 2 2 1 1 65.593 65.716 2 2.6369E-20 75604 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 110.31 95.615 168400000 0 0 0 5059000 7094200 15346000 18313000 5518300 13002000 15754000 17959000 30697000 22817000 8805500 8035800 15072 2645 13735 125953;125954;125955;125956;125957;125958;125959;125960;125961;125962;125963;125964;125965;125966;125967;125968;125969;125970;125971 100362;100363;100364;100365;100366;100367;100368;100369;100370;100371;100372;100373;100374;100375;100376;100377;100378;100379;100380 100378 4301;4302 19 EVEGDDVPESIMLEMK Oxidation (M) 1835.8169 0.81688177 2645 Q1KMD3 HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.29 2.21 1 1 19 2 1 2 1 1 1 2 2 2 2 1 2 2 76.287 75.94 2 1.2293E-23 86510 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 120.57 102.31 180920000 0 27882000 0 5788200 12438000 5341400 4561700 5607500 10315000 19046000 20248000 28732000 7950700 18875000 14136000 15073 2645 13735 125972;125973;125974;125975;125976;125977;125978;125979;125980;125981;125982;125983;125984;125985;125986;125987;125988;125989;125990;125991;125992 100381;100382;100383;100384;100385;100386;100387;100388;100389;100390;100391;100392;100393;100394;100395;100396;100397;100398;100399 100386 4301;4302 19 EVEGDDVPESIMLEMK Unmodified 1819.822 0.82196714 2645 Q1KMD3 HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 85.439 84.847 2 1.7006E-19 98096 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 125.54 108.17 177540000 0 101540000 0 0 4379800 7243500 0 5353100 4377300 6496400 6466900 9515500 4944800 8322400 18904000 15074 2645 13735 125993;125994;125995;125996;125997;125998;125999;126000;126001;126002;126003;126004 100400;100401;100402;100403;100404;100405;100406;100407;100408;100409;100410 100402 11 EVEGSGFPETR Unmodified 1206.5517 0.55168102 3321 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 35.097 35.205 2 0.01838 38726 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 52.278 25.585 5544400 0 0 0 0 0 0 2879700 2664700 0 0 0 0 0 0 0 15075 3321 13736 126005;126006 100411;100412 100412 2 EVEGSGFPETRTLEIEILGALEK Unmodified 2516.301 0.30099921 3321 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 99.918 91.787 3 0.00026081 118276 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.974 43.845 10084000 10084000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15076 3321 13737 126007 100413 100413 1 EVEIAYSDVAK Unmodified 1222.6081 0.60813326 5270 Q9Y696 CLIC4 Chloride intracellular channel protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.2 3.43 2 3 1 1 1 1 1 55.251 53.566 2 0.0060258 65188 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 72.643 49.903 38068000 750300 4572300 0 0 0 0 0 0 0 0 8569300 8440600 0 0 15735000 15077 5270 13738 126008;126009;126010;126011;126012 100414;100415;100416 100415 3 EVEIDQLNEQVTK Unmodified 1543.773 0.77296676 4077 Q99996 AKAP9 A-kinase anchor protein 9 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 60.455 60.517 2 8.5149E-09 69065 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 110.86 67.345 26463000 0 0 0 2437100 1642200 0 2451100 0 1983200 4573600 0 5243300 0 3159200 4973400 15078 4077 13739 126013;126014;126015;126016;126017;126018;126019;126020;126021 100417;100418;100419;100420;100421;100422 100421 6 EVEISHLK Unmodified 953.5182 0.51819605 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29.016 28.61 2 0.0088146 30477 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 84.916 32.616 242810000 0 11632000 4986000 15539000 14205000 12952000 15798000 19572000 14005000 21021000 24380000 28340000 24982000 14795000 20603000 15079 2556 13740 126022;126023;126024;126025;126026;126027;126028;126029;126030;126031;126032;126033;126034;126035 100423;100424;100425;100426;100427;100428;100429;100430;100431;100432;100433;100434 100431 11 EVELAPGASDR Unmodified 1142.5568 0.5567664 1146 P22735 TGM1 Protein-glutamine gamma-glutamyltransferase K yes yes 0 0 0 By MS/MS 10 0 1 1 34.574 34.141 2 0.019663 37812 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 64.04 49.374 18647000 0 0 0 18647000 0 0 0 0 0 0 0 0 0 0 0 15080 1146 13741 126036 100435 100435 0 EVELAPGASDRVTMPVAYK Unmodified 2032.0299 0.029926505 1146 P22735 TGM1 Protein-glutamine gamma-glutamyltransferase K yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 73.319 73.317 3 2.6087E-38 85016 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 90.754 69.521 109170000 0 0 0 32214000 3465000 13713000 0 14824000 3773000 11740000 11223000 0 11881000 6335400 0 15081 1146 13742 126037;126038;126039;126040;126041;126042;126043;126044;126045;126046 100436;100437;100438;100439;100440;100441;100442;100443;100444 100443 9 EVELAPGASDRVTMPVAYK Oxidation (M) 2048.0248 0.024841127 1146 P22735 TGM1 Protein-glutamine gamma-glutamyltransferase K yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 61.257 61.285 3 5.5757E-05 70839 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 63.145 56.871 114460000 0 0 0 38073000 5735400 7523400 8500500 18448000 5987100 10281000 8237700 11674000 0 0 0 15082 1146 13742 126047;126048;126049;126050;126051;126052;126053;126054;126055 100445 100445 1643 0 EVELNELEPEK Unmodified 1327.6507 0.65072636 860 P08195 SLC3A2 4F2 cell-surface antigen heavy chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 2 14 1 1 1 1 1 1 1 1 1 2 2 1 1 1 60.918 60.164 2 2.7852E-08 68905 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 134.25 98.952 702160000 23447000 238920000 0 25699000 27831000 28621000 27832000 27128000 21092000 39040000 46338000 55336000 44985000 45562000 50335000 15083 860 13743 126056;126057;126058;126059;126060;126061;126062;126063;126064;126065;126066;126067;126068;126069;126070;126071 100446;100447;100448;100449;100450;100451;100452;100453;100454;100455;100456;100457;100458;100459;100460 100456 11 EVELPLTNFR Unmodified 1216.6452 0.64518747 5004 Q9ULT8 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 81.369 81.516 2 0.010686 94745 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 55.567 4.2213 17305000 0 0 0 0 0 0 0 0 0 0 0 0 6591600 0 10713000 15084 5004 13744 126072;126073 100461 100461 1 EVELQHIRK Unmodified 1150.6459 0.64585618 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 1 By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 21.44 21.698 3 0.02547 22757 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 36.772 12.742 77426000 0 0 0 4322400 0 7185700 5884600 0 3986200 8113600 12496000 11494000 10296000 5577700 8068900 15085 2446 13745 126074;126075;126076;126077;126078;126079;126080;126081;126082;126083 100462;100463 100462 1 EVEMDAVGK Oxidation (M) 992.44846 0.4484615 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 1 0 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 11.444 11.744 2 0.041544 10166 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.789 42.982 8473300 0 0 0 0 0 0 0 0 994560 0 2157000 0 1805800 0 3516000 15086 1300 13746 126084;126085;126086;126087 100464 100464 1918 0 EVEMGPFK Oxidation (M) 951.43717 0.43716853 3170 Q86VP6;O75155 CAND1;CAND2 Cullin-associated NEDD8-dissociated protein 1;Cullin-associated NEDD8-dissociated protein 2 yes no 0 1 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 29.794 30.169 2 0.023867 31453 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.018 40.297 20089000 0 0 0 0 0 6762400 0 0 0 0 3753100 0 3217700 0 6355500 15087 3170 13747 126088;126089;126090;126091 100465;100466 100466 4787 1 EVENLILENTQLLETK Unmodified 1885.0044 0.004423261 391 O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 88.653 88.827 2 4.4903E-15 102792 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 126.76 109.4 6843800 0 0 0 0 0 0 0 0 0 0 2329500 0 0 0 4514300 15088 391 13748 126092;126093;126094 100467;100468;100469 100467 3 EVEPALELLEPIDQK Unmodified 1721.9087 0.90873196 1294 P31150 GDI1 Rab GDP dissociation inhibitor alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 2.91 2.27 8 2 1 2 6 2 1 93.899 89.182 2;3 6.5727E-131 112056 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 228.12 203.32 1483900000 116570000 1350500000 16894000 0 0 0 0 0 0 0 0 0 0 0 0 15089 1294 13749 126095;126096;126097;126098;126099;126100;126101;126102;126103;126104;126105 100470;100471;100472;100473;100474;100475;100476;100477;100478;100479;100480;100481;100482;100483;100484;100485;100486 100482 16 EVEPAPVGGEHPSAAAPGPGK Unmodified 1952.9592 0.9592044 3292 Q8IZ73 RPUSD2 RNA pseudouridylate synthase domain-containing protein 2 yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 38.715 39.095 3 0.0072774 42488 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 28.412 18.49 35316000 0 0 0 0 0 0 2501600 0 0 0 7073000 0 3597300 6077900 16066000 15090 3292 13750 126106;126107;126108;126109;126110 100487;100488 100488 2 EVEPEPTEDK Unmodified 1171.5245 0.52446322 1099 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.48 1 2 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 22.798 22.524 2 6.7626E-05 92833 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 123.21 82.179 501290000 144340000 19698000 0 15587000 17991000 23932000 28223000 17489000 18841000 21029000 38317000 46957000 31418000 29992000 47478000 15091 1099 13751 126111;126112;126113;126114;126115;126116;126117;126118;126119;126120;126121;126122;126123;126124;126125;126126 100489;100490;100491;100492;100493;100494;100495;100496;100497;100498;100499;100500;100501;100502;100503;100504 100497 16 EVEPFNNIDIEISMFEK Unmodified 2052.9714 0.97140857 28 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 98.406 90.276 2 2.773E-09 116494 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 137.62 129.9 14919000 14919000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15092 28 13752 126127 100505 100505 1 EVEPGEDR Unmodified 929.40904 0.40903953 2448 Q147X3 NAA30 N-alpha-acetyltransferase 30 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 8.1525 8.2052 2 0.0069433 5996 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 122.74 82.639 39257000 0 0 0 1992100 2711100 3023000 0 0 0 0 18156000 13375000 0 0 0 15093 2448 13753 126128;126129;126130;126131;126132 100506;100507 100506 2 EVEPLLGR Unmodified 911.50763 0.50763136 217 O14802 POLR3A DNA-directed RNA polymerase III subunit RPC1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 48.376 48.634 2 0.010759 54704 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 78.616 11.622 40263000 0 0 0 3676500 0 6613300 0 0 0 5359700 3922200 4135000 5978400 4420700 6157300 15094 217 13754 126133;126134;126135;126136;126137;126138;126139;126140 100508;100509;100510;100511 100508 4 EVEQLIK Unmodified 857.48583 0.48583328 1196 P25789 PSMA4 Proteasome subunit alpha type-4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.95 3.44 4 1 14 1 3 1 1 2 1 1 1 2 1 1 1 1 1 1 39.261 38.014 1;2 0.023276 51276 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 105.2 36.025 3449300000 90785000 2802300000 30523000 42593000 16365000 22778000 19495000 25748000 14246000 25409000 71792000 88522000 25965000 42315000 130460000 15095 1196 13755 126141;126142;126143;126144;126145;126146;126147;126148;126149;126150;126151;126152;126153;126154;126155;126156;126157;126158;126159 100512;100513;100514;100515;100516;100517;100518;100519;100520;100521;100522;100523 100517 11 EVEQSRQEVVR Unmodified 1357.695 0.69499121 3154 Q86UT8 CCDC84 Coiled-coil domain-containing protein 84 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 13.884 13.969 3 0.018117 13270 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 35.496 9.3717 37398000 0 0 0 2743800 5290000 3519300 3784100 2018000 2871200 6316300 0 0 5149200 0 5705900 15096 3154 13756 126160;126161;126162;126163;126164;126165;126166;126167;126168 100524;100525;100526;100527 100527 4 EVERPVANRECDPAELEEK Unmodified 2269.0645 0.06447411 2427 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 0 0 2 By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 2 1 38.501 38.815 3;4 4.1003E-05 43129 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 71.594 39.206 50652000 0 0 0 0 0 4549700 0 0 2880800 5998300 4407300 12151000 12888000 7777600 0 15097 2427 13757 126169;126170;126171;126172;126173;126174;126175;126176 100528;100529;100530 100530 3 EVERVLK Unmodified 871.51272 0.51271674 0 P0DPI2;A0A0B4J2D5 yes no 0 0 1 By MS/MS 2 0 1 1 18.335 15.85 2 0.043628 20206 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 130.04 28.348 16783000 0 0 16783000 0 0 0 0 0 0 0 0 0 0 0 0 15098 0 13758 126177 100531 100531 0 EVESFQQLLNAR Unmodified 1432.731 0.73104237 3310 Q8N1B4 VPS52 Vacuolar protein sorting-associated protein 52 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.28 81.384 2 9.0101E-09 94159 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 139.98 77.397 80311000 0 0 0 0 2504700 5767300 4582700 5556200 4080200 7575700 9970000 10870000 5128100 7852000 16424000 15099 3310 13759 126178;126179;126180;126181;126182;126183;126184;126185;126186;126187;126188;126189 100532;100533;100534;100535;100536;100537;100538;100539;100540;100541;100542;100543;100544 100533 13 EVESLEK Unmodified 832.41781 0.4178133 3255 Q8IX12 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 14.744 14.971 2 0.04393 14351 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 67.032 8.7862 240390000 0 0 0 14967000 0 0 0 16299000 12233000 0 0 38669000 29176000 24740000 104310000 15100 3255 13760 126190;126191;126192;126193;126194;126195;126196 100545 100545 1 EVESPYDVHDYIR Unmodified 1620.742 0.74200098 497 O75420 GIGYF1 PERQ amino acid-rich with GYF domain-containing protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 65.122 65.265 3 0.018215 74721 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 35.3 30.396 48445000 0 0 0 2595900 0 3137100 3961100 4087400 3076000 4281000 5148300 6864700 4458500 2988500 7846600 15101 497 13761 126197;126198;126199;126200;126201;126202;126203;126204;126205;126206;126207 100546;100547;100548;100549;100550;100551;100552;100553;100554 100546 9 EVESPYEVHDYIR Unmodified 1634.7577 0.75765105 2994 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 60.336 60.409 3 8.6423E-07 68146 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.927 65.331 181900000 0 0 0 8787300 10945000 17189000 14406000 14336000 17220000 0 0 28830000 20305000 17488000 32393000 15102 2994 13762 126208;126209;126210;126211;126212;126213;126214;126215;126216;126217 100555;100556;100557;100558;100559;100560;100561;100562;100563;100564;100565 100557 11 EVESQLPEK Unmodified 1057.5292 0.52915466 1655 P51531 SMARCA2 Probable global transcription activator SNF2L2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 25.196 25.398 2 0.012915 27359 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 60.589 43.194 123560000 0 0 0 5863200 12125000 10101000 10967000 8094500 7848500 10919000 9190600 10082000 10422000 11545000 16400000 15103 1655 13763 126218;126219;126220;126221;126222;126223;126224;126225;126226;126227;126228;126229 100566;100567;100568 100568 3 EVETHANNSSIELEK Unmodified 1698.8061 0.8060578 4369 Q9H2K8 TAOK3 Serine/threonine-protein kinase TAO3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 1 1 6 2 1 1 1 1 1 1 53.235 51.987 3 0.00017831 42891 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 59.673 45.445 141850000 0 50203000 0 8029500 5751100 0 0 7390700 0 8586600 0 0 13213000 48678000 0 15104 4369 13764 126230;126231;126232;126233;126234;126235;126236;126237 100569;100570;100571 100569 2 EVETLYQCQGNK Unmodified 1467.6664 0.6663932 4159 Q9BUB5 MKNK1 MAP kinase-interacting serine/threonine-protein kinase 1 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS 8.4 3.2 1 4 1 1 1 1 1 49.49 48.321 2 0.011146 53983 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 53.493 27.686 47689000 0 11571000 0 0 4066200 11589000 0 0 0 9933700 0 0 0 10529000 0 15105 4159 13765 126238;126239;126240;126241;126242 100572;100573 100573 2 EVEVDRSETSTSLK Unmodified 1578.7737 0.77369504 4052 Q99715 COL12A1 Collagen alpha-1(XII) chain yes yes 0 0 1 By MS/MS 3 0 1 1 33.796 29.283 3 0.035448 36570 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 31.526 18.341 2547900 0 2547900 0 0 0 0 0 0 0 0 0 0 0 0 0 15106 4052 13766 126243 100574 100574 1 EVEVEVESMDK Oxidation (M) 1308.5755 0.57551251 3039 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 0 1 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 33.359 33.473 2 0.00031002 36187 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 84.213 28.843 16836000 0 0 0 0 1368100 4173000 0 4703200 0 0 0 6591600 0 0 0 15107 3039 13767 126244;126245;126246;126247;126248;126249 100575;100576;100577;100578 100578 4646 4 EVEVEVESMDK Unmodified 1292.5806 0.58059789 3039 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 48.501 49.08 2 0.0037726 54395 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.048 46.702 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15108 3039 13767 126250;126251 100579;100580 100579 2 EVEVIGGADK Unmodified 1015.5186 0.51858998 778 P04183 TK1 Thymidine kinase, cytosolic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.019 31.208 2 0.00055012 34501 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 123.86 44.263 180310000 0 0 0 9409500 11816000 13962000 14977000 13828000 12647000 17064000 17936000 18920000 13559000 15661000 20527000 15109 778 13768 126252;126253;126254;126255;126256;126257;126258;126259;126260;126261;126262;126263 100581;100582;100583;100584;100585;100586;100587;100588;100589;100590;100591;100592;100593;100594;100595 100595 15 EVEVTRTHK Unmodified 1097.5829 0.58292157 1798 P57764 GSDMD Gasdermin-D yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 7.4921 4.6258 2 2.7597E-10 8029 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 189.82 117.59 61843000 54607000 0 7236600 0 0 0 0 0 0 0 0 0 0 0 0 15110 1798 13769 126264;126265 100596;100597 100596 2 EVEVVASTAAGAPAQR Unmodified 1554.8002 0.80018457 2839 Q63ZY3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 yes yes 0 0 0 By MS/MS 10 0 1 1 43.752 44.206 2 0.042252 49357 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 40.449 24.91 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15111 2839 13770 126266 100598 100598 1 EVFDLPVVK Unmodified 1044.5855 0.58554733 3021 Q6ZW49 PAXIP1 PAX-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.17 80.229 2 0.0067965 92380 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.127 51.603 34356000 0 0 0 1049400 1407900 2548900 1938700 2743900 2144500 2729700 3416900 3646700 3025600 4085600 5618100 15112 3021 13771 126267;126268;126269;126270;126271;126272;126273;126274;126275;126276;126277;126278 100599;100600;100601;100602;100603;100604;100605;100606;100607;100608 100602 10 EVFDNDGK Unmodified 922.40323 0.40322587 2151 Q08209 PPP3CA Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 17.781 14.242 2 0.010502 18627 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.37 95.665 34397000 0 34397000 0 0 0 0 0 0 0 0 0 0 0 0 0 15113 2151 13772 126279;126280 100609 100609 1 EVFEDAAEIR Unmodified 1177.5615 0.56151742 1085 P19338 NCL Nucleolin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 56.93 56.217 2 0.00082118 63654 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 119.21 88.599 1181900000 0 67516000 0 69600000 53372000 59548000 0 81464000 59329000 99314000 119110000 140040000 140600000 118270000 173760000 15114 1085 13773 126281;126282;126283;126284;126285;126286;126287;126288;126289;126290;126291;126292;126293 100610;100611;100612;100613;100614;100615;100616;100617;100618;100619;100620;100621;100622;100623;100624;100625;100626 100624 15 EVFEDAAEIRLVSK Unmodified 1604.841 0.84098675 1085 P19338 NCL Nucleolin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.1 0.539 1 7 2 5 3 2 82.584 78.471 2;3 0.00023369 74679 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 82.908 75.167 601760000 374900000 131160000 95708000 0 0 0 0 0 0 0 0 0 0 0 0 15115 1085 13774 126294;126295;126296;126297;126298;126299;126300;126301;126302;126303 100627;100628;100629;100630;100631;100632;100633;100634 100628 7 EVFEMATR Unmodified 981.45897 0.45896661 1851;858 P08134;P61586 RHOC;RHOA Rho-related GTP-binding protein RhoC;Transforming protein RhoA no no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 46.8 46.967 2 0.041524 51776 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.933 16.136 77699000 0 0 0 5764400 2926700 4529700 3602300 4598200 0 7881300 11734000 8588500 7355700 6036100 14682000 15116 858;1851 13775 126304;126305;126306;126307;126308;126309;126310;126311;126312;126313;126314 100635;100636;100637 100636 3 EVFFVIR Unmodified 908.51199 0.51198846 2171 Q09472 EP300 Histone acetyltransferase p300 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.308 80.368 2 0.027168 92376 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.748 58.186 75744000 0 0 0 2392700 2644800 7253900 4641900 6103600 6485100 6601000 6724100 10065000 5003900 6692200 11136000 15117 2171 13776 126315;126316;126317;126318;126319;126320;126321;126322;126323;126324;126325;126326 100638;100639 100638 2 EVFGDDSEISK Unmodified 1224.551 0.55101232 323 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 42.734 42.16 2 0.00082981 46865 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.943 63.224 789520000 0 114080000 0 43884000 38754000 34254000 47194000 59946000 41460000 55492000 67676000 71260000 69145000 41584000 104790000 15118 323 13777 126327;126328;126329;126330;126331;126332;126333;126334;126335;126336;126337;126338;126339;126340 100640;100641;100642;100643;100644;100645;100646;100647;100648;100649;100650;100651 100649 10 EVFHFSQAEK Unmodified 1220.5826 0.58258722 3055 Q7L5Y9 MAEA Macrophage erythroblast attacher yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 42.66 42.747 3 0.01586 47987 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 35.71 25.402 53529000 0 0 0 6132100 3736000 6747400 3415700 5785900 0 5801900 0 10101000 6834700 4974400 0 15119 3055 13778 126341;126342;126343;126344;126345;126346;126347;126348;126349 100652 100652 1 EVFIPQDGK Unmodified 1031.5288 0.52876073 1579 P49589 CARS Cysteine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 48.073 42.811 2 0.0076208 55633 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.629 68.126 559870000 0 559870000 0 0 0 0 0 0 0 0 0 0 0 0 0 15120 1579 13779 126350;126351 100653 100653 1 EVFIPQDGKK Unmodified 1159.6237 0.62372375 1579 P49589 CARS Cysteine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS 3 0 1 1 38.35 33.718 3 0.018303 41995 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 37.749 21.784 9639300 0 9639300 0 0 0 0 0 0 0 0 0 0 0 0 0 15121 1579 13780 126352 100654 100654 1 EVFLPSTPGLGMHVEVK Unmodified 1838.9601 0.96005603 3125 Q7Z7H5 TMED4 Transmembrane emp24 domain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 87.391 82.256 3 3.3294E-05 103859 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.19 75.813 64173000 11730000 49702000 2740800 0 0 0 0 0 0 0 0 0 0 0 0 15122 3125 13781 126353;126354;126355 100655;100656;100657 100655 3 EVFLPSTPGLGMHVEVK Oxidation (M) 1854.955 0.95497065 3125 Q7Z7H5 TMED4 Transmembrane emp24 domain-containing protein 4 yes yes 0 1 0 By MS/MS By matching By matching By matching By MS/MS By matching 8.67 2.98 1 5 1 1 1 1 1 1 76.88 76.597 3 0.0011488 87478 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 42.314 21.221 69518000 0 0 22054000 0 0 0 0 0 7853200 0 0 10708000 7094600 6281200 15527000 15123 3125 13781 126356;126357;126358;126359;126360;126361 100658;100659 100659 4747 2 EVFLVMPTGGGK Oxidation (M) 1249.6377 0.63765925 1496 P46063 RECQL ATP-dependent DNA helicase Q1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.7 3.52 2 1 7 1 1 1 1 1 1 1 1 1 1 62.288 61.563 2 0.00015047 69453 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.883 61.143 82441000 0 24870000 7817600 0 0 4791600 0 0 0 5153300 7010400 10273000 5981200 5727900 10815000 15124 1496 13782 126362;126363;126364;126365;126366;126367;126368;126369;126370;126371 100660;100661;100662;100663;100664;100665;100666;100667;100668;100669;100670 100662 2360 11 EVFLVMPTGGGK Unmodified 1233.6427 0.64274463 1496 P46063 RECQL ATP-dependent DNA helicase Q1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 78.18 77.054 2 5.8695E-08 88715 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 119.68 70.884 425660000 28087000 217200000 8387000 4781800 6666600 12557000 6885300 7621100 7194400 13310000 19318000 18621000 10493000 16019000 48526000 15125 1496 13782 126372;126373;126374;126375;126376;126377;126378;126379;126380;126381;126382;126383;126384;126385;126386;126387 100671;100672;100673;100674;100675;100676;100677;100678;100679;100680;100681;100682;100683;100684;100685;100686;100687 100677 17 EVFPTAALMPGAEK Oxidation (M) 1475.733 0.7330162 2161 Q08623 HDHD1 Pseudouridine-5'-phosphatase yes yes 0 1 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 75.137 71.317 2 0.00071214 88986 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.781 52.318 219730000 0 215260000 4466800 0 0 0 0 0 0 0 0 0 0 0 0 15126 2161 13783 126388;126389;126390 100688;100689;100690 100688 3475 3 EVFPTAALMPGAEK Unmodified 1459.7381 0.73810158 2161 Q08623 HDHD1 Pseudouridine-5'-phosphatase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.8 3.12 3 1 1 1 2 1 1 84.287 79.64 2 0.00039303 92862 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.596 70.284 532600000 7143500 521330000 4129200 0 0 0 0 0 0 0 0 0 0 0 0 15127 2161 13783 126391;126392;126393;126394;126395 100691;100692;100693;100694;100695;100696 100693 6 EVFPVLAAK Unmodified 972.56442 0.56441796 3549 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.733 71.806 2 0.0061449 82164 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 75.854 51.035 186960000 0 0 0 9802400 7136500 21743000 12492000 10947000 7838800 21726000 15812000 18507000 14210000 15808000 30933000 15128 3549 13784 126396;126397;126398;126399;126400;126401;126402;126403;126404;126405;126406;126407 100697;100698;100699;100700;100701;100702;100703;100704 100704 8 EVFQIASNDHDAAINR Unmodified 1798.8598 0.85982471 4965 Q9UKG1 APPL1 DCC-interacting protein 13-alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.834 55.959 3 1.2598E-05 63583 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 77.746 73.644 71648000 0 0 0 2724000 3420100 7441000 5017500 4357700 2596300 5611200 6376600 8029200 5871000 5022400 15181000 15129 4965 13785 126408;126409;126410;126411;126412;126413;126414;126415;126416;126417;126418;126419 100705;100706;100707;100708;100709;100710;100711;100712 100705 7 EVFSMAGVVVR Unmodified 1192.6274 0.62742892 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.845 78.903 2 1.2611E-05 91003 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 137.13 108.91 419350000 0 0 0 9186700 17855000 25302000 21225000 44433000 21938000 42779000 39352000 44797000 32875000 38609000 81004000 15130 1681 13786 126420;126421;126422;126423;126424;126425;126426;126427;126428;126429;126430;126431 100713;100714;100715;100716;100717;100718;100719;100720;100721;100722;100723;100724;100725;100726;100727;100728;100729 100721 17 EVFSMAGVVVRADILEDK Unmodified 1977.0241 0.024112846 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 0 1 By MS/MS By matching 2.5 0.5 2 2 3 1 94.293 88.542 2;3 4.7201E-09 112919 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 103.14 71.498 57695000 56545000 1149700 0 0 0 0 0 0 0 0 0 0 0 0 0 15131 1681 13787 126432;126433;126434;126435 100730;100731;100732 100731 3 EVFSMAGVVVRADILEDK Oxidation (M) 1993.019 0.019027468 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 1 1 By MS/MS 2 0 1 1 87.315 79.184 3 0.0011371 103164 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.178 41.89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15132 1681 13787 126436 100733 100733 2692 1 EVFTSSSSSSSR Unmodified 1259.563 0.56297399 70 CON__P08779;P08779 KRT16 Keratin, type I cytoskeletal 16 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.983 17.162 2 3.0672E-08 16705 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 130.41 109.54 + 973990000 0 0 0 142620000 25573000 16808000 20996000 68305000 12189000 31737000 18437000 23108000 578380000 23247000 12579000 15133 70 13788 126437;126438;126439;126440;126441;126442;126443;126444;126445;126446;126447;126448 100734;100735;100736;100737;100738;100739;100740;100741;100742;100743;100744;100745;100746;100747;100748;100749;100750 100746 17 EVGAFGTPVINLGTR Unmodified 1529.8202 0.82019173 5075 Q9Y223 GNE Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase;UDP-N-acetylglucosamine 2-epimerase (hydrolyzing);N-acetylmannosamine kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 82.521 82.612 2 3.5842E-59 95254 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 199.7 172.37 68688000 0 0 0 1462800 0 5859000 2555100 2724500 2445200 6394800 6847600 8371900 0 6130400 25896000 15134 5075 13789 126449;126450;126451;126452;126453;126454;126455;126456;126457;126458 100751;100752;100753;100754;100755;100756;100757;100758;100759;100760 100754 10 EVGDGTTSVVIIAAELLK Unmodified 1814.0037 0.0036949795 1067 P17987 TCP1 T-complex protein 1 subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.62 3.89 1 5 3 7 5 4 1 1 1 1 1 1 1 100.81 98.403 2;3 3.6168E-48 120523 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 139.86 115 1141100000 897410000 233910000 0 919060 0 1252000 0 0 0 1934300 1623100 1112900 0 823930 2143300 15135 1067 13790 126459;126460;126461;126462;126463;126464;126465;126466;126467;126468;126469;126470;126471;126472;126473;126474 100761;100762;100763;100764;100765;100766;100767;100768;100769;100770;100771;100772 100762 12 EVGEAFTILSDPK Unmodified 1404.7137 0.71366097 4035 Q99615 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.67 3.86 7 2 12 3 5 1 1 1 1 1 1 1 1 1 1 1 1 1 80.18 78.865 2 0.00062456 91294 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 88.441 74.849 1806100000 76219000 1167400000 30917000 20730000 21014000 32807000 32826000 29338000 31448000 52034000 51205000 55254000 41334000 52408000 111240000 15136 4035 13791 126475;126476;126477;126478;126479;126480;126481;126482;126483;126484;126485;126486;126487;126488;126489;126490;126491;126492;126493;126494;126495 100773;100774;100775;100776;100777;100778;100779;100780;100781;100782;100783;100784;100785;100786;100787;100788;100789;100790;100791;100792;100793 100785 20 EVGEAFTILSDPKK Unmodified 1532.8086 0.80862399 4035 Q99615 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 0 0 1 By MS/MS 2 0 1 1 75.726 72.964 3 0.015856 88836 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 37.55 32.636 5673900 0 0 5673900 0 0 0 0 0 0 0 0 0 0 0 0 15137 4035 13792 126496 100794 100794 1 EVGEAICTDPLVSK Unmodified 1516.7443 0.74430917 1666 P51649 ALDH5A1 Succinate-semialdehyde dehydrogenase, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 69.295 63.426 2 2.4066E-18 80887 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.62 101.87 35498000 0 35498000 0 0 0 0 0 0 0 0 0 0 0 0 0 15138 1666 13793 126497 100795 100795 1 EVGETLLYYGCR Unmodified 1458.6813 0.68131498 1039 P16435 POR NADPH--cytochrome P450 reductase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 72.662 72.638 2 0.0017401 84351 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 77.677 49.906 26451000 0 0 0 5008000 0 0 0 0 0 0 0 0 7545800 0 13898000 15139 1039 13794 126498;126499;126500 100796;100797;100798 100798 3 EVGIEFMDLYSHLVPVYDVEPLEK Unmodified 2820.3932 0.39318504 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 100.41 94.942 3 1.9026E-132 119163 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 151.01 143.9 149760000 133160000 16592000 0 0 0 0 0 0 0 0 0 0 0 0 0 15140 2930 13795 126501;126502;126503 100799;100800 100800 2 EVGIGGDQGPHDK Unmodified 1307.6106 0.61059288 1536 P48382 RFX5 DNA-binding protein RFX5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 35 3 3 3 3 3 3 3 3 3 3 3 2 18.257 18.437 2;3 0.0037598 18075 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 39.961 34.317 208330000 0 0 0 13276000 15029000 22288000 15366000 15853000 14931000 20595000 15982000 24946000 18022000 16581000 15459000 15141 1536 13796 126504;126505;126506;126507;126508;126509;126510;126511;126512;126513;126514;126515;126516;126517;126518;126519;126520;126521;126522;126523;126524;126525;126526;126527;126528;126529;126530;126531;126532;126533;126534;126535;126536;126537;126538 100801;100802;100803;100804;100805;100806;100807;100808;100809 100808 5 EVGIPAPNAVATLPDNIK Unmodified 1817.9887 0.98871362 240 O15014 ZNF609 Zinc finger protein 609 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 83.283 82.972 2 0.00011015 101905 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.92 91.281 134770000 0 58776000 0 2079900 4953400 5508500 5956400 5173700 4467200 9440600 7814600 7994000 6159900 6688700 9757100 15142 240 13797 126539;126540;126541;126542;126543;126544;126545;126546;126547;126548;126549;126550;126551 100810;100811;100812;100813;100814;100815;100816;100817;100818;100819 100813 10 EVGNALLNVVLK Unmodified 1267.75 0.7499869 4998 Q9ULK4 MED23 Mediator of RNA polymerase II transcription subunit 23 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 92.686 89.002 2 0.0043127 110809 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.062 66.441 12269000 0 11683000 586160 0 0 0 0 0 0 0 0 0 0 0 0 15143 4998 13798 126552;126553 100820 100820 1 EVGPPLPQEAVPLQK Unmodified 1600.8825 0.88245763 2617 Q16610 ECM1 Extracellular matrix protein 1 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 75.512 75.345 2 0.0083666 87251 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 38.783 21.757 8347600 0 0 0 4728300 0 0 0 3619300 0 0 0 0 0 0 0 15144 2617 13799 126554;126555 100821 100821 1 EVGQQLQDDLMK Oxidation (M) 1418.6711 0.67114423 451 O75044;P0DMP2;P0DJJ0 SRGAP2;SRGAP2B;SRGAP2C SLIT-ROBO Rho GTPase-activating protein 2;SLIT-ROBO Rho GTPase-activating protein 2B;SLIT-ROBO Rho GTPase-activating protein 2C yes no 0 1 0 By MS/MS 2 0 1 1 55.214 49.4 2 0.023045 64040 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 51.765 37.091 19242000 0 19242000 0 0 0 0 0 0 0 0 0 0 0 0 0 15145 451 13800 126556 100822 100822 1 EVGSIIGK Unmodified 801.45962 0.45961853 2521;2520 Q15365;P57723;Q15366;P57721 PCBP1;PCBP4;PCBP2;PCBP3 Poly(rC)-binding protein 1;Poly(rC)-binding protein 4;Poly(rC)-binding protein 2;Poly(rC)-binding protein 3 no no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.43 3.14 5 1 24 1 3 2 2 2 2 2 2 2 2 2 2 2 2 2 34.388 33.602 1;2 0.010495 37258 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 79.469 22.005 12924000000 27941000 6293800000 221200000 369150000 344190000 532130000 515100000 429080000 262490000 711050000 675670000 577410000 557210000 523510000 884130000 15146 2520;2521 13801 126557;126558;126559;126560;126561;126562;126563;126564;126565;126566;126567;126568;126569;126570;126571;126572;126573;126574;126575;126576;126577;126578;126579;126580;126581;126582;126583;126584;126585;126586 100823;100824;100825;100826;100827;100828;100829;100830;100831;100832;100833;100834;100835;100836;100837;100838;100839;100840;100841;100842;100843;100844;100845 100823 17 EVGSPPLDPTER Unmodified 1295.6357 0.635745 3813 Q96EK5 KIAA1279 KIF1-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 45.269 45.603 2 0.0056965 51284 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 67.207 38.289 117180000 0 0 0 0 0 0 15075000 0 0 18785000 24162000 0 15581000 15716000 27857000 15147 3813 13802 126587;126588;126589;126590;126591;126592 100846;100847;100848 100848 2 EVGSPPLDPTERFLPEEEK Unmodified 2168.0637 0.063729054 3813 Q96EK5 KIAA1279 KIF1-binding protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 80.118 75.407 3 1.608E-09 92834 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 95.954 78.17 234890000 70900000 146750000 17235000 0 0 0 0 0 0 0 0 0 0 0 0 15148 3813 13803 126593;126594;126595;126596 100849;100850;100851;100852;100853;100854 100854 6 EVGVYEALK Unmodified 1006.5335 0.53351176 1422 P40925 MDH1 Malate dehydrogenase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.69 4.01 1 5 1 6 2 4 1 1 1 1 1 1 1 58.35 56.67 2 0.005064 57705 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.743 37.749 5550600000 197860000 4844500000 133720000 9664800 0 8924200 0 0 0 0 66724000 51625000 0 42396000 195110000 15149 1422 13804 126597;126598;126599;126600;126601;126602;126603;126604;126605;126606;126607;126608;126609 100855;100856;100857;100858;100859;100860;100861;100862;100863;100864;100865;100866;100867 100858 13 EVHDSESHQLALQK Unmodified 1619.7903 0.79034816 5247 Q9Y5S2 CDC42BPB Serine/threonine-protein kinase MRCK beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 23.798 23.733 2;3 0.012396 30897 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 53.683 38.992 47836000 0 0 1931600 3552900 2166700 3541100 2672200 0 3084500 4750000 3078200 5467200 5676500 5470200 6445100 15150 5247 13805 126610;126611;126612;126613;126614;126615;126616;126617;126618;126619;126620;126621 100868;100869;100870 100868 3 EVHELYK Unmodified 916.46543 0.46543219 916 P10155 TROVE2 60 kDa SS-A/Ro ribonucleoprotein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 20.543 16.837 2 0.0076467 21819 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 158.12 107.15 174070000 13547000 122450000 38072000 0 0 0 0 0 0 0 0 0 0 0 0 15151 916 13806 126622;126623;126624;126625 100871;100872;100873;100874;100875 100872 5 EVHGMAQPSQNNYWK Unmodified 1787.805 0.80495237 4012 Q99470 SDF2 Stromal cell-derived factor 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 51.275 45.292 3 2.565E-05 62228 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.29 63.655 25820000 18604000 0 7216700 0 0 0 0 0 0 0 0 0 0 0 0 15152 4012 13807 126626;126627 100876;100877;100878 100876 3 EVHLAQLTAATLTK Unmodified 1494.8406 0.84059282 3970 Q96RL7 VPS13A Vacuolar protein sorting-associated protein 13A yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 74.132 72.274 3 0.00028049 94730 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 92.457 86.079 25841000 8853800 0 0 0 0 5178100 0 0 0 0 0 6850300 0 0 4958600 15153 3970 13808 126628;126629;126630;126631 100879;100880 100880 2 EVHLGACGALK Unmodified 1153.5914 0.59137776 426 O60716 CTNND1 Catenin delta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 44.231 38.874 2;3 0.023366 51702 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.692 45.587 53349000 38923000 0 14426000 0 0 0 0 0 0 0 0 0 0 0 0 15154 426 13809 126632;126633;126634 100881;100882;100883 100881 3 EVHRVEMEELTSK Unmodified 1585.777 0.77700628 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 37.517 37.708 3 0.00070454 41498 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 75.589 63.983 59632000 0 0 0 2565100 0 7158500 5367200 6211800 4404200 0 9260200 0 7669300 5677700 11318000 15155 2291 13810 126635;126636;126637;126638;126639;126640;126641;126642;126643 100884;100885;100886;100887;100888;100889;100890 100886 7 EVIDAFISENGWVEDY Unmodified 1884.8418 0.84177461 5029 Q9UNE7 STUB1 E3 ubiquitin-protein ligase CHIP yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 97.219 91.401 2 0.0019689 115411 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.325 87.479 25593000 25593000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15156 5029 13811 126644;126645 100891;100892 100892 1 EVIELPLTNPELFQR Unmodified 1796.9672 0.96724989 1898 P62333 PSMC6 26S protease regulatory subunit 10B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 92.638 92.74 2 2.3406E-14 107518 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 116.55 108.14 47959000 0 0 0 0 1775900 2399100 0 1191100 1413500 13551000 9377700 7395600 0 1310300 9544300 15157 1898 13812 126646;126647;126648;126649;126650;126651;126652;126653;126654 100893;100894;100895;100896;100897;100898;100899;100900;100901;100902;100903 100895 11 EVIELPVK Unmodified 925.54843 0.54843354 1876 P62195 PSMC5 26S protease regulatory subunit 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.564 67.647 2 0.015415 77550 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 68.915 30.123 789240000 0 0 0 66788000 65723000 71846000 25680000 25943000 16591000 113520000 125570000 166950000 19713000 29293000 61619000 15158 1876 13813 126655;126656;126657;126658;126659;126660;126661;126662;126663;126664;126665;126666 100904;100905;100906;100907;100908;100909;100910;100911;100912;100913;100914;100915;100916;100917 100904 14 EVIENTEAVHQQFQK Unmodified 1798.885 0.88497683 4930 Q9UIV8 SERPINB13 Serpin B13 yes yes 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 43.918 43.589 3 6.1217E-27 49418 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 127.79 110.72 16482000 0 0 0 13244000 1520500 0 1717600 0 0 0 0 0 0 0 0 15159 4930 13814 126667;126668;126669 100918 100918 1 EVIFSVEDGSVK Unmodified 1307.6609 0.66089712 699 O95834 EML2 Echinoderm microtubule-associated protein-like 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 69.619 69.117 2 2.3199E-05 86949 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.83 85.091 288890000 0 247830000 0 0 0 0 2377300 0 0 3288600 6279800 6313100 0 5186500 17616000 15160 699 13815 126670;126671;126672;126673;126674;126675;126676 100919;100920;100921;100922;100923 100919 5 EVILEFTK Unmodified 977.54335 0.54334816 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 69.248 69.39 2 0.019504 79751 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 63.565 33.38 110850000 0 0 0 0 8144700 8967500 9085100 9831900 0 10871000 11718000 15781000 10890000 11682000 13881000 15161 3023 13816 126677;126678;126679;126680;126681;126682;126683;126684;126685;126686 100924;100925;100926;100927 100924 4 EVILTQESDSK Unmodified 1247.6245 0.62451161 4656 Q9NUY8 TBC1D23 TBC1 domain family member 23 yes yes 0 0 0 By MS/MS By MS/MS 5 3.56 1 1 1 2 1 35.79 31.091 2 0.00023701 40682 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.38 64.385 44221000 0 44221000 0 0 0 0 0 0 0 0 0 0 0 0 0 15162 4656 13817 126687;126688;126689 100928;100929;100930 100930 3 EVILTQESDSKEEVIK Unmodified 1845.9571 0.95713872 4656 Q9NUY8 TBC1D23 TBC1 domain family member 23 yes yes 0 0 1 By MS/MS 3 0 1 1 57.183 52.33 3 0.049102 64460 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 22.365 3.7692 2379900 0 2379900 0 0 0 0 0 0 0 0 0 0 0 0 0 15163 4656 13818 126690 100931 100931 1 EVINEVEK Unmodified 958.49713 0.49712625 4365 Q9H2G2 SLK STE20-like serine/threonine-protein kinase yes yes 0 0 0 By MS/MS 2 0 1 1 29.913 25.52 2 0.016245 33368 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.491 32.417 26011000 0 26011000 0 0 0 0 0 0 0 0 0 0 0 0 0 15164 4365 13819 126691 100932 100932 1 EVINGNIK Unmodified 885.49198 0.4919813 546 O75821 EIF3G Eukaryotic translation initiation factor 3 subunit G yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.42 1.93 1 11 1 1 1 1 1 1 1 1 1 1 1 1 25.846 25.63 2 0.010759 27533 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 78.616 32.734 255340000 0 11643000 0 23259000 13475000 21503000 21602000 13915000 14885000 25769000 25979000 34522000 23607000 25178000 0 15165 546 13820 126692;126693;126694;126695;126696;126697;126698;126699;126700;126701;126702;126703 100933;100934;100935;100936;100937;100938;100939;100940;100941 100935 8 EVIPISDPELK Unmodified 1238.6758 0.6758189 2888 Q6IN85 SMEK1 Serine/threonine-protein phosphatase 4 regulatory subunit 3A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 73.411 71.92 2 0.0024673 82987 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 67.563 56.073 359570000 9701400 254440000 1633500 6003000 4684600 9877400 6020900 0 4566900 8429400 9592500 9577400 9752400 9597700 15690000 15166 2888 13821 126704;126705;126706;126707;126708;126709;126710;126711;126712;126713;126714;126715;126716;126717;126718;126719;126720 100942;100943;100944;100945;100946;100947;100948;100949;100950;100951;100952;100953;100954;100955;100956 100944 15 EVIPITDSELR Unmodified 1270.6769 0.67688153 2748 Q5MIZ7 SMEK2 Serine/threonine-protein phosphatase 4 regulatory subunit 3B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 70.222 70.348 2 0.0076229 81796 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 64.04 41.3 53861000 0 0 0 2927200 0 0 0 0 0 8073600 7470300 9233900 6871800 6979700 12304000 15167 2748 13822 126721;126722;126723;126724;126725;126726;126727 100957;100958;100959;100960;100961 100961 5 EVIPITDSELRQK Unmodified 1526.8304 0.83042206 2748 Q5MIZ7 SMEK2 Serine/threonine-protein phosphatase 4 regulatory subunit 3B yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 64.555 59.747 3 0.011148 76830 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 49.929 22.96 76344000 0 64774000 11570000 0 0 0 0 0 0 0 0 0 0 0 0 15168 2748 13823 126728;126729;126730 100962;100963;100964 100962 3 EVIPQEIEEVK Unmodified 1311.6922 0.69219725 2086 Q03001 DST Dystonin yes yes 0 0 0 By MS/MS 2 0 1 1 71.511 65.784 2 0.00030527 83585 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.57 107.26 39800000 0 39800000 0 0 0 0 0 0 0 0 0 0 0 0 0 15169 2086 13824 126731 100965;100966 100966 2 EVIPTHTVYALNIER Unmodified 1753.9363 0.93628412 3760 Q96BN2 TADA1 Transcriptional adapter 1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 74.673 74.786 3 0.011649 86251 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 33.796 28.894 47317000 0 0 0 0 2205300 4046800 3633400 3710100 0 5410800 5554900 6265100 3287000 3493900 9709700 15170 3760 13825 126732;126733;126734;126735;126736;126737;126738;126739;126740;126741 100967;100968;100969 100967 2 EVIPVNVPEAQEEMK Oxidation (M) 1726.8448 0.8447515 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 7.44 3.81 1 4 11 2 2 1 1 1 1 1 1 1 1 1 1 1 1 70.335 69.605 2 0.00031602 76527 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 64.121 49.442 1156000000 88186000 456180000 2160200 31415000 0 56438000 51064000 34417000 36592000 59054000 72671000 82927000 54081000 51120000 79743000 15171 848 13826 126742;126743;126744;126745;126746;126747;126748;126749;126750;126751;126752;126753;126754;126755;126756;126757 100970;100971;100972;100973;100974;100975;100976;100977;100978;100979;100980;100981;100982;100983;100984;100985 100979 1053 16 EVIPVNVPEAQEEMK Unmodified 1710.8498 0.84983687 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.29 2.21 1 1 19 2 1 1 2 1 2 2 1 1 2 2 2 2 75.27 74.969 2;3 3.9174E-23 86989 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 153.34 136.71 2820200000 0 2026900000 0 22394000 28189000 62951000 33765000 52701000 34484000 79112000 84581000 94192000 51289000 75532000 174100000 15172 848 13826 126758;126759;126760;126761;126762;126763;126764;126765;126766;126767;126768;126769;126770;126771;126772;126773;126774;126775;126776;126777;126778 100986;100987;100988;100989;100990;100991;100992;100993;100994;100995;100996;100997;100998;100999;101000 100997 12 EVIQALPK Unmodified 896.53312 0.53311783 3663 Q92797 SYMPK Symplekin yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.756 45.926 2 0.013136 52474 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 73.039 30.039 129590000 0 0 0 4677500 7449400 11949000 9014900 8738500 7681000 11575000 11176000 10956000 16257000 12526000 17594000 15173 3663 13827 126779;126780;126781;126782;126783;126784;126785;126786;126787;126788;126789;126790 101001;101002;101003;101004;101005;101006;101007;101008;101009;101010 101010 10 EVIQEWNLTNIK Unmodified 1485.7827 0.78274359 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 81.21 80.092 2 6.0392E-11 92508 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 182.16 155.64 798010000 12596000 585350000 5011500 4279900 6204300 27055000 6613700 10352000 9419500 22816000 17476000 21624000 9463600 14408000 45339000 15174 5187 13828 126791;126792;126793;126794;126795;126796;126797;126798;126799;126800;126801;126802;126803;126804;126805;126806 101011;101012;101013;101014;101015;101016;101017;101018;101019;101020;101021;101022;101023;101024;101025;101026 101016 16 EVIRFEK Unmodified 919.51272 0.51271674 2323 Q13596 SNX1 Sorting nexin-1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 38.591 33.587 2 0.034082 41996 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 132.08 53.469 46495000 26966000 0 19529000 0 0 0 0 0 0 0 0 0 0 0 0 15175 2323 13829 126807;126808 101027 101027 0 EVITAQDTVIK Unmodified 1215.6711 0.67106787 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52.185 51.11 2 2.9371E-15 56826 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 159.79 88.101 1625300000 15794000 893250000 1893600 35095000 31146000 69677000 44394000 45116000 41160000 76892000 82208000 86787000 51204000 58851000 91872000 15176 643 13830 126809;126810;126811;126812;126813;126814;126815;126816;126817;126818;126819;126820;126821;126822;126823 101028;101029;101030;101031;101032;101033;101034;101035;101036;101037;101038;101039;101040;101041 101032 14 EVITEIEK Unmodified 959.51753 0.51752734 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.152 40.331 2 0.0066594 45663 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 98.997 55.227 282050000 0 0 0 16250000 16998000 21798000 17691000 16802000 16499000 27402000 23813000 40205000 29075000 27581000 27935000 15177 2804 13831 126824;126825;126826;126827;126828;126829;126830;126831;126832;126833;126834;126835 101042;101043;101044;101045;101046;101047;101048;101049;101050;101051;101052;101053 101052 12 EVIYDMLNALAAYHAPEEADK Unmodified 2362.1151 0.1151127 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 98.264 92.873 3 5.769E-18 116359 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.29 87.27 75538000 55726000 19812000 0 0 0 0 0 0 0 0 0 0 0 0 0 15178 3119 13832 126836;126837;126838 101054;101055;101056 101056 3 EVIYICPFNGPIK Unmodified 1548.801 0.80103619 2302 Q13496 MTM1 Myotubularin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 47.913 47.857 3 0.049921 53712 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 20.427 0.68655 21481000 0 0 0 6760400 0 5368700 0 3988500 5363000 0 0 0 0 0 0 15179 2302 13833 126839;126840;126841;126842 101057 101057 1 EVLADFQR Unmodified 976.49779 0.49779495 536 O75718 CRTAP Cartilage-associated protein yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 49.417 49.988 2 0.017704 55396 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.235 33.093 15147000 0 0 0 0 0 0 0 0 0 0 6473900 0 0 0 8673600 15180 536 13834 126843;126844 101058 101058 1 EVLAEEECPALGTQER Unmodified 1829.8465 0.84654241 27 A6NFI3 ZNF316 Zinc finger protein 316 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 58.062 57.846 2 3.2235E-30 66512 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 144.65 129.96 23706000 0 0 0 6916300 8725000 0 0 0 0 0 0 8064800 0 0 0 15181 27 13835 126845;126846;126847;126848;126849 101059;101060;101061;101062 101061 4 EVLASEAILNVPDK Unmodified 1496.8086 0.80862399 2862 Q69YN2 CWF19L1 CWF19-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 77.77 77.803 2 5.4691E-08 89371 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.401 69.742 79734000 0 0 0 5485300 3984400 11183000 5380800 0 0 8116800 8695400 10382000 7326400 7472300 11707000 15182 2862 13836 126850;126851;126852;126853;126854;126855;126856;126857;126858;126859;126860 101063;101064;101065;101066;101067;101068;101069;101070;101071;101072;101073 101066 10 EVLASPDR Unmodified 885.4556 0.45559579 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 22.038 22.112 2 0.045385 23118 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 48.561 6.9089 10513000 0 0 0 0 0 0 4911800 0 0 5601500 0 0 0 0 0 15183 4285 13837 126861;126862 101074 101074 1 EVLASPDRLWGSR Unmodified 1484.7736 0.77357588 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.364 68.442 3 0.0015453 78523 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 59.306 29.247 103570000 0 0 0 3194500 2511900 9536600 4446500 6267200 8275400 8353800 9426400 10502000 10275000 8466000 22315000 15184 4285 13838 126863;126864;126865;126866;126867;126868;126869;126870;126871;126872;126873;126874 101075;101076;101077;101078;101079;101080;101081;101082;101083;101084;101085 101079 11 EVLCPESQSPNGVR Unmodified 1570.741 0.74095513 2432 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 40.471 40.31 2 0.00042079 44954 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 70.977 46.123 5123100 0 0 0 0 1753500 0 0 3369600 0 0 0 0 0 0 0 15185 2432 13839 126875;126876 101086;101087 101086 2 EVLDEDTDEEK Unmodified 1320.5569 0.55688556 5171 Q9Y3P9 RABGAP1 Rab GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 24.574 24.199 2 2.0671E-05 24784 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 123.86 106.62 44787000 5985000 0 0 0 3106800 5559400 3228400 0 0 5642600 3597300 6039500 4918000 0 6709800 15186 5171 13840 126877;126878;126879;126880;126881;126882;126883;126884;126885;126886;126887;126888 101088;101089;101090;101091;101092;101093;101094;101095;101096;101097;101098;101099;101100;101101 101092 14 EVLDQVCYR Unmodified 1180.5547 0.55465791 2539 Q15459 SF3A1 Splicing factor 3A subunit 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 48.229 48.46 2 0.031803 54649 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 55.676 35.89 109990000 0 0 0 7877700 0 7700300 0 6732300 6789800 9965200 12866000 14658000 0 16661000 26742000 15187 2539 13841 126889;126890;126891;126892;126893;126894;126895;126896;126897 101102 101102 1 EVLEGLEYLHK Unmodified 1328.6976 0.69761697 684 O95747 OXSR1 Serine/threonine-protein kinase OSR1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 71.655 71.847 3 0.046924 82753 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 31.478 26.324 20430000 0 0 0 0 0 7639300 0 0 0 0 0 0 0 0 12791000 15188 684 13842 126898;126899 101103 101103 1 EVLEHPWITANSSK Unmodified 1609.81 0.81002097 231 O14965 AURKA Aurora kinase A yes yes 0 0 0 By MS/MS 2 0 1 1 78.82 70.689 3 0.022258 92950 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 24.275 4.6711 17610000 17610000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15189 231 13843 126900 101104 101104 1 EVLEIVELGISGSK Unmodified 1471.8134 0.81337501 3187 Q86X10 RALGAPB Ral GTPase-activating protein subunit beta yes yes 0 0 0 By MS/MS 2 0 1 1 93.466 85.335 2 0.050973 110552 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.216 25.217 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15190 3187 13844 126901 101105 101105 1 EVLELGQVLDTGK Unmodified 1399.7559 0.75586013 3306 Q8N129 CNPY4 Protein canopy homolog 4 yes yes 0 0 0 By MS/MS 10 0 1 1 48.304 49.027 3 0.019969 54394 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.006 3.1637 12291000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12291000 15191 3306 13845 126902 101106 101106 0 EVLEYNAIGGK Unmodified 1191.6136 0.61355299 997 P14324 FDPS Farnesyl pyrophosphate synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.72 1 3 1 11 2 2 1 1 1 1 1 1 1 1 1 1 1 1 57.559 56.605 2 0.00031818 59953 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 103.7 65.614 4696800000 151840000 3633200000 32714000 16305000 0 22893000 24564000 26330000 18515000 52424000 118400000 81751000 24916000 110370000 382590000 15192 997 13846 126903;126904;126905;126906;126907;126908;126909;126910;126911;126912;126913;126914;126915;126916;126917;126918 101107;101108;101109;101110;101111;101112;101113;101114;101115;101116;101117;101118;101119;101120;101121;101122;101123;101124 101107 17 EVLFQHSGFQQS Unmodified 1405.6626 0.66262845 3776 Q96CD2 PPCDC Phosphopantothenoylcysteine decarboxylase yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 64.654 59.816 2 0.038993 76791 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 57.108 28.19 24519000 0 17940000 6579500 0 0 0 0 0 0 0 0 0 0 0 0 15193 3776 13847 126919;126920 101125 101125 0 EVLGEHIVPSDQQQIVR Unmodified 1946.0221 0.022139011 3379 Q8N9N8 EIF1AD Probable RNA-binding protein EIF1AD yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.642 64.73 3 4.7735E-37 74054 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 96.489 85.896 120280000 0 0 0 4596600 5201100 6210200 8155700 9199800 5544800 10351000 16208000 11903000 10921000 11174000 20815000 15194 3379 13848 126921;126922;126923;126924;126925;126926;126927;126928;126929;126930;126931;126932 101126;101127;101128;101129;101130;101131;101132;101133;101134;101135;101136;101137 101131 12 EVLLDEDDDLWIALRHK Unmodified 2079.0637 0.063669474 1857 P61764 STXBP1 Syntaxin-binding protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 93.025 84.895 4 0.00022911 109866 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.529 66.625 50255000 50255000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15195 1857 13849 126933 101138;101139 101138 2 EVLLEASEETGK Unmodified 1303.6507 0.65072636 582 O94763 URI1 Unconventional prefoldin RPB5 interactor 1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 50.991 45.67 2 2.3744E-14 59127 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 142 111.92 87511000 0 87511000 0 0 0 0 0 0 0 0 0 0 0 0 0 15196 582 13850 126934;126935;126936 101140;101141;101142 101140 3 EVLLFPAMKPEDK Unmodified 1515.8007 0.80070184 2485 Q15046 KARS Lysine--tRNA ligase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 79.531 78.198 3 3.3305E-06 99372 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.352 84.352 253700000 19500000 143040000 11963000 0 0 6878300 0 3655100 3074900 5382200 8263200 7060900 2251000 9475300 33156000 15197 2485 13851 126937;126938;126939;126940;126941;126942;126943;126944;126945;126946;126947;126948;126949 101143;101144;101145;101146;101147;101148;101149;101150;101151 101143 9 EVLLFPAMKPEDK Oxidation (M) 1531.7956 0.79561646 2485 Q15046 KARS Lysine--tRNA ligase yes yes 0 1 1 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 73.88 67.552 3 0.003304 82238 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 62.528 51.258 130240000 38826000 91416000 0 0 0 0 0 0 0 0 0 0 0 0 0 15198 2485 13851 126950;126951 101152;101153;101154 101152 4094 3 EVLLFPAMKPEDKK Oxidation (M) 1659.8906 0.89057948 2485 Q15046 KARS Lysine--tRNA ligase yes yes 0 1 2 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 57.779 56.804 3 0.0010298 81439 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.042 36.324 40304000 8467400 0 0 0 0 0 2715100 2701900 0 4843100 0 0 6104500 6634400 8837600 15199 2485 13852 126952;126953;126954;126955;126956;126957;126958 101155;101156 101156 4094 1 EVLLVALGSR Unmodified 1055.6339 0.63389451 2179 Q10570 CPSF1 Cleavage and polyadenylation specificity factor subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 78.786 78.792 2 0.0040176 91079 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 74.376 15.561 46338000 0 0 0 2312900 4250200 4724800 3839400 0 0 6269700 0 7304100 0 7066800 10570000 15200 2179 13853 126959;126960;126961;126962;126963;126964;126965;126966;126967 101157;101158;101159;101160;101161;101162;101163;101164;101165;101166;101167 101158 11 EVLMDCAHLVK Unmodified 1313.6472 0.64717808 3185 Q86WR0 CCDC25 Coiled-coil domain-containing protein 25 yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 1 2 62.771 58.285 2;3 0.0012918 72022 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 95.099 69.54 54458000 0 38616000 15842000 0 0 0 0 0 0 0 0 0 0 0 0 15201 3185 13854 126968;126969;126970 101168;101169;101170 101170 1 EVLNEEDEVQPNGK Unmodified 1598.7424 0.74239491 670 O95573 ACSL3 Long-chain-fatty-acid--CoA ligase 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.897 38.077 2 2.2963E-117 41684 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 259.35 212.25 425240000 0 0 0 29150000 28932000 30779000 30173000 40467000 22369000 33112000 33205000 58896000 51777000 30203000 36183000 15202 670 13855 126971;126972;126973;126974;126975;126976;126977;126978;126979;126980;126981;126982 101171;101172;101173;101174;101175;101176;101177;101178;101179;101180;101181;101182;101183;101184;101185 101183 15 EVLNMLK Unmodified 845.46807 0.46807473 3682 Q92896 GLG1 Golgi apparatus protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 64.214 58.307 2 0.031352 74687 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.673 3.1613 24032000 0 24032000 0 0 0 0 0 0 0 0 0 0 0 0 0 15203 3682 13856 126983 101186 101186 1 EVLPALENNK Unmodified 1125.603 0.60298831 4910 Q9UHV9 PFDN2 Prefoldin subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.4 3.68 4 1 10 1 3 1 1 1 1 1 1 1 1 1 1 1 53.167 51.207 1;2 1.7174E-08 65824 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 159.28 135.12 1556500000 21880000 1339000000 6756600 10763000 6209000 12779000 7766300 11984000 0 0 32538000 28327000 0 20168000 58304000 15204 4910 13857 126984;126985;126986;126987;126988;126989;126990;126991;126992;126993;126994;126995;126996;126997;126998 101187;101188;101189;101190;101191;101192;101193;101194;101195;101196;101197;101198;101199;101200;101201;101202;101203;101204;101205;101206 101193 20 EVLPHVPLGVIQR Unmodified 1455.8562 0.8561833 5268 Q9Y679 AUP1 Ancient ubiquitous protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 1 2 1 1 2 2 1 1 1 2 2 78.378 78.456 2;3 8.1573E-09 90183 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.08 101.26 316870000 0 0 0 6661700 12092000 34685000 11241000 23566000 29180000 45017000 18502000 30185000 19475000 24862000 61406000 15205 5268 13858 126999;127000;127001;127002;127003;127004;127005;127006;127007;127008;127009;127010;127011;127012;127013;127014;127015 101207;101208;101209;101210;101211;101212;101213;101214;101215;101216;101217;101218;101219;101220;101221 101210 15 EVLPLAFLGMHEIADEEK Unmodified 2040.0238 0.023778495 2828 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog yes yes 0 0 0 By MS/MS By MS/MS 2.4 0.49 3 2 2 3 98.396 93.517 2;3 6.5521E-76 116765 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 182.03 168.06 72801000 17972000 54828000 0 0 0 0 0 0 0 0 0 0 0 0 0 15206 2828 13859 127016;127017;127018;127019;127020 101222;101223;101224;101225;101226 101226 5 EVLPVDITTAK Unmodified 1184.6653 0.66525421 3806 Q96EA4 SPDL1 Protein Spindly yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 70.734 70.952 2 0.030061 81636 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 39.305 12.921 22962000 0 0 0 0 0 3343100 0 0 0 5811300 2390600 3794000 0 2791900 4831200 15207 3806 13860 127021;127022;127023;127024;127025;127026 101227 101227 1 EVLQALEELAVNYDQK Unmodified 1860.9469 0.94690838 1328 P33176;O60282;Q12840 KIF5B;KIF5C;KIF5A Kinesin-1 heavy chain;Kinesin heavy chain isoform 5C;Kinesin heavy chain isoform 5A yes no 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 6 3 3 5 1 97.798 93.006 2;3 4.2323E-51 116149 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 164.41 149.14 165210000 83397000 78116000 3695300 0 0 0 0 0 0 0 0 0 0 0 0 15208 1328 13861 127027;127028;127029;127030;127031;127032;127033;127034;127035 101228;101229;101230;101231;101232;101233;101234;101235 101233 7 EVLQECK Unmodified 904.43242 0.43241751 2060 Q01658 DR1 Protein Dr1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 13.953 14.199 2 0.038679 13705 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 69.383 49.537 43346000 0 0 0 0 0 0 3511800 0 3090500 4604800 8441900 0 5011600 6149600 12535000 15209 2060 13862 127036;127037;127038;127039;127040;127041;127042 101236;101237 101236 2 EVLQEWPLTTVK Unmodified 1441.7817 0.78168095 5201 Q9Y4G6 TLN2 Talin-2 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 84.751 82.356 2 7.5264E-07 102255 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.7 54.983 70212000 0 67772000 0 0 0 2440100 0 0 0 0 0 0 0 0 0 15210 5201 13863 127043;127044 101238;101239 101239 2 EVLQNQLGIRPPTR Unmodified 1619.9107 0.91073807 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.458 61.558 3 0.00099386 70618 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 58.071 46.156 292690000 0 0 0 11740000 11313000 27136000 17905000 18076000 15939000 27603000 27732000 34644000 20686000 31652000 48266000 15211 3119 13864 127045;127046;127047;127048;127049;127050;127051;127052;127053;127054;127055;127056 101240;101241;101242;101243;101244;101245;101246;101247;101248;101249;101250;101251;101252;101253;101254;101255 101242 15 EVLQQLETQK Unmodified 1214.6507 0.65066678 3652 Q92696 RABGGTA Geranylgeranyl transferase type-2 subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 47.535 47.927 2 0.0020595 52917 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.67 39.676 24849000 0 0 0 0 0 0 0 0 0 4571100 4954500 0 0 4709100 10614000 15212 3652 13865 127057;127058;127059;127060 101256;101257;101258 101256 3 EVLQSLPLTEIIR Unmodified 1509.8766 0.87664397 1693 P52630 STAT2 Signal transducer and activator of transcription 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 91.869 91.945 2 0.012182 106713 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.359 20.568 9387700 0 0 0 611200 0 0 1401300 0 0 1912800 1146400 1121800 0 764090 2430200 15213 1693 13866 127061;127062;127063;127064;127065;127066;127067 101259 101259 1 EVLRENDLLRK Unmodified 1383.7834 0.78341229 3217 Q8IUD2 ERC1 ELKS/Rab6-interacting/CAST family member 1 yes yes 0 0 2 By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 40.692 41.029 3 0.019246 45929 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 63.408 49.399 48006000 0 0 0 0 0 5877800 4680300 0 4804500 3999700 9300400 6475200 0 0 12869000 15214 3217 13867 127068;127069;127070;127071;127072;127073;127074 101260;101261 101260 0 EVLSAEVK Unmodified 873.48075 0.48074791 3242 Q8IWJ2 GCC2 GRIP and coiled-coil domain-containing protein 2 yes yes 0 0 0 By MS/MS 10 0 1 1 92.34 92.459 1 0.041797 107299 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 105.39 19.304 5308700 0 0 0 0 0 0 0 0 0 5308700 0 0 0 0 0 15215 3242 13868 127075 101262 101262 0 EVLSLLQEK Unmodified 1057.6019 0.60192568 2971 Q6UB35 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 76.212 72.015 2 0.0076144 90121 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.439 48.625 24998000 0 24998000 0 0 0 0 0 0 0 0 0 0 0 0 0 15216 2971 13869 127076;127077 101263 101263 1 EVLSMDDEIQK Oxidation (M) 1321.6071 0.60714699 2125 Q06210 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 36.97 36.233 2 1.357E-05 44449 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.41 67.706 144440000 13967000 39854000 0 6065400 5036400 7043200 0 5094300 3733700 8621000 8747800 13599000 9989400 10687000 12006000 15217 2125 13870 127078;127079;127080;127081;127082;127083;127084;127085;127086;127087;127088;127089;127090 101264;101265;101266;101267;101268;101269;101270;101271;101272;101273;101274;101275;101276;101277 101266 3429 14 EVLSMDDEIQK Unmodified 1305.6122 0.61223236 2125 Q06210 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 54.688 54.778 2 0.0026174 71372 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.044 61.351 58621000 0 0 0 0 3917500 8526400 11189000 0 0 0 0 21738000 0 13250000 0 15218 2125 13870 127091;127092;127093;127094;127095;127096;127097 101278;101279;101280 101279 3 EVLSPAVPAAAPSSSMSEEPGPEQAATPPVWER Oxidation (M) 3389.6086 0.60855056 3881 Q96IQ9 ZNF414 Zinc finger protein 414 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 81.98 82.077 3 1.3411E-58 95043 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 90.518 84.552 74877000 0 0 0 0 8681600 7239200 5794300 0 7782400 11642000 9611200 8457000 0 4715000 10955000 15219 3881 13871 127098;127099;127100;127101;127102;127103;127104;127105;127106 101281;101282;101283;101284;101285;101286;101287;101288 101285 5387 8 EVLSPAVPAAAPSSSMSEEPGPEQAATPPVWER Unmodified 3373.6136 0.61363593 3881 Q96IQ9 ZNF414 Zinc finger protein 414 yes yes 0 0 0 By MS/MS 10 0 1 1 84.096 84.275 3 3.286E-13 97300 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.986 30.748 8967100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8967100 15220 3881 13871 127107 101289 101289 1 EVLSSILK Unmodified 887.53278 0.53278348 2863 Q69YN4 KIAA1429 Protein virilizer homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 67.206 67.244 2 0.035595 76091 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.403 21.791 34316000 0 0 0 2393200 3173000 4025200 3295800 2727600 2608800 3177100 4007900 0 3396100 0 5510900 15221 2863 13872 127108;127109;127110;127111;127112;127113;127114;127115;127116;127117 101290;101291 101290 2 EVLTCILCQEEQEVK Unmodified 1876.891 0.89104976 3246 Q8IWV7 UBR1 E3 ubiquitin-protein ligase UBR1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 86.205 82.183 2;3 0.000131 98346 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 129.74 116.86 26420000 0 26420000 0 0 0 0 0 0 0 0 0 0 0 0 0 15222 3246 13873 127118;127119 101292;101293;101294 101294 3 EVLTDIFAK Unmodified 1034.5648 0.56481189 500 O75448 MED24 Mediator of RNA polymerase II transcription subunit 24 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 78.612 78.693 2 0.0083402 90427 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.905 25.138 76140000 0 0 0 4968400 0 6836100 7550300 9974500 0 6158500 5051800 9837500 8257400 7599700 9905400 15223 500 13874 127120;127121;127122;127123;127124;127125;127126;127127;127128;127129 101295;101296;101297;101298;101299;101300;101301;101302;101303 101298 9 EVLTDNNLGQR Unmodified 1257.6313 0.63132832 1406 P39880 CUX1 Homeobox protein cut-like 1 no no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.495 37.675 2 0.00029007 41432 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 93.551 51.572 212200000 0 0 0 12071000 10690000 13184000 16923000 18066000 9079200 15628000 20861000 24533000 22647000 19556000 28958000 15224 1406 13875 127130;127131;127132;127133;127134;127135;127136;127137;127138;127139;127140;127141 101304;101305;101306;101307;101308;101309 101307 3 EVLTEDK Unmodified 832.41781 0.4178133 1137 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 6 4 3 3 1 1 1 1 1 1 13.865 12.415 2 0.014121 16948 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 121.29 41.839 844490000 95697000 664610000 5131600 0 0 0 0 0 0 12762000 19675000 0 0 0 46608000 15225 1137 13876 127142;127143;127144;127145;127146;127147 101310;101311;101312;101313 101313 4 EVMAEFSDAVTEETLK Oxidation (M) 1813.8292 0.82916101 3337 Q8N543 OGFOD1 Prolyl 3-hydroxylase OGFOD1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.5 0.5 2 2 2 1 1 76.253 71.644 2 0.0003309 91522 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.719 79.32 12659000 7789800 3123400 1746300 0 0 0 0 0 0 0 0 0 0 0 0 15226 3337 13877 127148;127149;127150;127151 101314;101315;101316 101315 4925 3 EVMAEFSDAVTEETLK Unmodified 1797.8342 0.83424639 3337 Q8N543 OGFOD1 Prolyl 3-hydroxylase OGFOD1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.5 0.5 2 2 2 1 1 84.194 79.817 2 6.8915E-08 101176 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 132.79 119.36 29752000 18463000 6290700 4998300 0 0 0 0 0 0 0 0 0 0 0 0 15227 3337 13877 127152;127153;127154;127155 101317;101318;101319 101318 2 EVMDLEERTK Unmodified 1248.602 0.60200203 1489 P45983 MAPK8 Mitogen-activated protein kinase 8 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 38.359 33.56 3 0.016075 41738 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 61.353 36.499 9496400 0 9496400 0 0 0 0 0 0 0 0 0 0 0 0 0 15228 1489 13878 127156;127157 101320 101320 1 EVMFLGEIEEILDVIEPTQFK Unmodified 2478.2604 0.26037995 2504 Q15172 PPP2R5A Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 105.11 99.603 3 1.1795E-39 126350 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 126.69 118.79 38677000 30512000 8164900 0 0 0 0 0 0 0 0 0 0 0 0 0 15229 2504 13879 127158;127159;127160 101321;101322 101322 1 EVMFLGEIEEILDVIEPTQFK Oxidation (M) 2494.2553 0.25529457 2504 Q15172 PPP2R5A Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform yes yes 0 1 0 By MS/MS 2 0 1 1 106.27 98.139 3 4.8679E-18 125885 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 100.82 93.603 28592000 28592000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15230 2504 13879 127161 101323;101324 101324 4109 2 EVMFLGELEEILDVIEPSQFVK Oxidation (M) 2579.3081 0.30805843 2610 Q16537 PPP2R5E Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform yes yes 0 1 0 By MS/MS By MS/MS 2.67 0.471 1 2 2 1 105.8 100.64 3 1.6973E-32 125892 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 117.55 109.85 34374000 32659000 1715300 0 0 0 0 0 0 0 0 0 0 0 0 0 15231 2610 13880 127162;127163;127164 101325;101326 101326 4259 2 EVMFLGELEEILDVIEPSQFVK Unmodified 2563.3131 0.3131438 2610 Q16537 PPP2R5E Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 2 2 2 2 106.4 101.34 3 6.2707E-26 126321 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 108.71 101.31 30514000 27101000 3413600 0 0 0 0 0 0 0 0 0 0 0 0 0 15232 2610 13880 127165;127166;127167;127168 101327;101328 101328 2 EVMFLNELEEILDVIEPSEFSK Oxidation (M) 2625.2772 0.27715223 2442 Q14738 PPP2R5D Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform yes yes 0 1 0 By MS/MS By MS/MS 2.4 0.49 3 2 3 2 105.79 100.12 3 3.1606E-85 125125 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 150.69 146.79 136470000 106410000 30062000 0 0 0 0 0 0 0 0 0 0 0 0 0 15233 2442 13881 127169;127170;127171;127172;127173 101329;101330;101331;101332 101331 4008 3 EVMFLNELEEILDVIEPSEFSK Unmodified 2609.2822 0.28223761 2442 Q14738 PPP2R5D Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 106.19 101.98 3 6.2248E-11 123023 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 79.942 78.197 8260100 0 8260100 0 0 0 0 0 0 0 0 0 0 0 0 0 15234 2442 13881 127174;127175 101333 101333 1 EVMFLNELEEILDVIEPSEFVK Oxidation (M) 2637.3135 0.31353773 2275 Q13362 PPP2R5C Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform yes yes 0 1 0 By MS/MS 2.33 0.471 2 1 3 106.07 100.17 2;3 3.7066E-49 126091 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 126.77 116.3 7589100 7589100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15235 2275 13882 127176;127177;127178 101334;101335;101336 101335 3708 3 EVMFLNELEEILDVIEPSEFVK Unmodified 2621.3186 0.31862311 2275 Q13362 PPP2R5C Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 106.46 100.56 3 9.8032E-115 126426 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 187.57 177.76 22834000 20854000 1980600 0 0 0 0 0 0 0 0 0 0 0 0 0 15236 2275 13882 127179;127180 101337;101338 101338 2 EVMFTEEDVK Oxidation (M) 1241.5486 0.54856948 2531;1672 Q15418;P51812;Q15349 RPS6KA1;RPS6KA3;RPS6KA2 Ribosomal protein S6 kinase alpha-1;Ribosomal protein S6 kinase alpha-3;Ribosomal protein S6 kinase alpha-2 no no 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.86 3.4 2 2 10 1 3 1 1 2 1 1 1 1 1 1 45.99 45.096 2 0.0065365 50782 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 56.916 35.969 53511000 540310 4040500 0 0 3666900 7481800 6807300 3785300 0 7827200 5111600 8256700 0 5993800 0 15237 2531;1672 13883 127181;127182;127183;127184;127185;127186;127187;127188;127189;127190;127191;127192;127193;127194 101339;101340;101341;101342;101343;101344;101345;101346;101347;101348;101349;101350 101340 2682 12 EVMFTEEDVK Unmodified 1225.5537 0.55365485 2531;1672 Q15418;P51812;Q15349 RPS6KA1;RPS6KA3;RPS6KA2 Ribosomal protein S6 kinase alpha-1;Ribosomal protein S6 kinase alpha-3;Ribosomal protein S6 kinase alpha-2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.13 1 1 7 2 1 2 1 1 1 1 55.049 53.489 2 0.0017713 60718 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 95.502 75.172 442540000 0 387300000 0 0 0 13626000 0 0 0 15552000 12532000 0 0 0 13534000 15238 2531;1672 13883 127195;127196;127197;127198;127199;127200;127201;127202;127203 101351;101352;101353;101354;101355;101356;101357 101352 7 EVMLDAALALAAEISSK Unmodified 1730.9124 0.91243713 2223 Q13011 ECH1 Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.43 0.495 4 3 3 3 1 101.88 97.041 2;3 3.8007E-05 121460 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.429 78.066 40408000 29358000 9385200 1664300 0 0 0 0 0 0 0 0 0 0 0 0 15239 2223 13884 127204;127205;127206;127207;127208;127209;127210 101358;101359;101360;101361;101362;101363;101364 101362 6 EVMLDAALALAAEISSK Oxidation (M) 1746.9074 0.90735175 2223 Q13011 ECH1 Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial yes yes 0 1 0 By MS/MS 3 0 1 1 98.72 95.193 2 0.011675 98978 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 42.629 29.621 1101900 1101900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15240 2223 13884 127211 101365 101365 3612 1 EVMLILIR Oxidation (M) 1001.5943 0.59433788 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.756 79.814 2 0.0044693 91711 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 97.071 73.099 149530000 0 0 0 5378300 6137600 9117900 9941700 7829000 9798500 15873000 11180000 27697000 13702000 12803000 20070000 15241 516 13885 127212;127213;127214;127215;127216;127217;127218;127219;127220;127221;127222;127223 101366;101367;101368;101369;101370;101371;101372;101373;101374;101375;101376;101377 101369 667 12 EVMLQNGETPK Unmodified 1244.6071 0.60708741 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 35.287 34.939 2 4.2346E-05 43769 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.97 83.895 323180000 0 118350000 0 15495000 10948000 26130000 16616000 14105000 15434000 24960000 27676000 28484000 24976000 0 0 15242 2451 13886 127224;127225;127226;127227;127228;127229;127230;127231;127232;127233;127234 101378;101379;101380;101381;101382;101383;101384;101385;101386;101387;101388;101389;101390;101391 101382 14 EVMLQNGETPK Oxidation (M) 1260.602 0.60200203 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 27.354 27.474 2 0.00017374 29436 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 91.867 63.468 14718000 0 0 0 5045600 0 0 0 0 3541900 0 6130100 0 0 0 0 15243 2451 13886 127235;127236;127237;127238 101392;101393;101394 101392 4021 3 EVMNADDPDLQRPDEEAIK Oxidation (M) 2199.9954 0.99539149 2320 Q13573 SNW1 SNW domain-containing protein 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 47.355 47 3 6.8565E-07 53120 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 75.548 66.294 181630000 0 47475000 0 8483700 0 10837000 13281000 10556000 0 0 16250000 24031000 19509000 9466000 21745000 15244 2320 13887 127239;127240;127241;127242;127243;127244;127245;127246;127247;127248 101395;101396;101397;101398;101399;101400;101401;101402;101403;101404;101405 101404 3784 11 EVMNADDPDLQRPDEEAIK Unmodified 2184.0005 0.0004768701 2320 Q13573 SNW1 SNW domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 56.748 55.586 3 4.225E-52 70390 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.08 125.05 284820000 9135500 123220000 0 6841400 7597300 10898000 6346500 10384000 6310500 12252000 18920000 20464000 9307200 10250000 32892000 15245 2320 13887 127249;127250;127251;127252;127253;127254;127255;127256;127257;127258;127259;127260;127261;127262;127263 101406;101407;101408;101409;101410;101411;101412;101413;101414;101415;101416;101417;101418;101419;101420;101421;101422;101423;101424;101425 101411 19 EVMNLMEQPIK Acetyl (Protein N-term);Oxidation (M) 1388.668 0.6679731 1010 P14923 JUP Junction plakoglobin yes yes 1 1 0 By MS/MS By MS/MS 10 0 2 1 1 25.943 25.667 2 0.00031454 27320 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 67.897 45.184 28041000 0 0 0 22130000 5911300 0 0 0 0 0 0 0 0 0 0 15246 1010 13888 127264;127265 101426;101427;101428;101429 101428 1392;1393 4 EVMPLLLAYLK Oxidation (M) 1304.7414 0.74139604 3522 Q8TEX9 IPO4 Importin-4 yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 92.531 92.613 2 0.00034562 107454 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.426 54.602 4293700 0 0 0 0 0 1573500 0 0 0 0 0 0 0 0 2720200 15247 3522 13889 127266;127267 101430 101430 5022 1 EVMQATATSGFASGMEDK Unmodified 1858.8077 0.80771406 4138 Q9BTA9 WAC WW domain-containing adapter protein with coiled-coil yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 61.367 61.539 2 0.00053579 70294 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 68.034 58.029 48615000 0 0 0 0 3973800 2970100 2611600 6625200 2680300 4645700 4907000 5345800 2942300 3134800 8778900 15248 4138 13890 127268;127269;127270;127271;127272;127273;127274;127275;127276;127277;127278 101431;101432;101433;101434;101435;101436;101437;101438;101439 101432 8 EVMQATATSGFASGMEDK 2 Oxidation (M) 1890.7975 0.79754331 4138 Q9BTA9 WAC WW domain-containing adapter protein with coiled-coil yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 36.388 36.608 2 3.9301E-12 40341 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 90.731 87.603 29407000 0 0 0 2638000 0 0 3339100 2547600 0 3146100 3586700 5617100 6272700 2259400 0 15249 4138 13890 127279;127280;127281;127282;127283;127284;127285;127286 101440;101441;101442;101443;101444 101440 5622;5623 5 EVMQEVAQLSQFDEELYK Oxidation (M) 2201.0198 0.019815329 1580 P49591 SARS Serine--tRNA ligase, cytoplasmic yes yes 0 1 0 By MS/MS By MS/MS 5 3.56 1 1 1 2 1 87.277 84.637 3 3.862E-55 104613 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 147.92 138.87 174240000 0 166210000 0 0 0 0 0 0 0 0 0 0 0 0 8033300 15250 1580 13891 127287;127288;127289 101445;101446;101447;101448 101445 2548 4 EVMQEVAQLSQFDEELYK Unmodified 2185.0249 0.024900707 1580 P49591 SARS Serine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.12 0.331 7 1 2 4 2 95.227 90.347 2;3 3.561E-147 112399 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 294.52 279.51 519170000 45232000 465340000 8600300 0 0 0 0 0 0 0 0 0 0 0 0 15251 1580 13891 127290;127291;127292;127293;127294;127295;127296;127297 101449;101450;101451;101452;101453;101454;101455 101449 6 EVMSDLEESK Oxidation (M) 1181.5122 0.51218397 2053 Q01433 AMPD2 AMP deaminase 2 yes yes 0 1 0 By MS/MS 2 0 1 1 21.259 17.546 2 0.02921 23137 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 57.55 46.84 23514000 0 23514000 0 0 0 0 0 0 0 0 0 0 0 0 0 15252 2053 13892 127298 101456 101456 1 EVMSDLEESK Unmodified 1165.5173 0.51726935 2053 Q01433 AMPD2 AMP deaminase 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.12 3.72 2 1 5 1 2 1 1 1 1 1 38.421 36.596 2 0.0089388 46116 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.311 63.169 229470000 0 220650000 0 0 0 0 0 0 1537200 4178500 0 0 3105400 0 0 15253 2053 13892 127299;127300;127301;127302;127303;127304;127305;127306 101457;101458;101459;101460;101461 101457 5 EVMSLHEASRK Unmodified 1285.6449 0.6448699 1802 P58107 EPPK1 Epiplakin yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 19.359 19.473 3 0.0045049 20160 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 38.634 23.432 12651000 0 0 0 2636300 627320 1885300 0 1424600 1459400 0 0 2402000 2215800 0 0 15254 1802 13893 127307;127308;127309;127310;127311;127312;127313 101462;101463;101464 101464 3 EVMTHINEDK Unmodified 1214.5601 0.56013721 4455 Q9H8V3 ECT2 Protein ECT2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 20.432 20.434 3 0.006549 21204 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 47.302 29.482 65825000 0 0 0 13945000 10292000 8726600 7828300 9545700 7539700 7948400 0 0 0 0 0 15255 4455 13894 127314;127315;127316;127317;127318;127319;127320 101465;101466;101467;101468;101469;101470 101465 6 EVNALECEIQLLK Unmodified 1557.8072 0.80724378 5119 Q9Y2U5 MAP3K2 Mitogen-activated protein kinase kinase kinase 2 yes yes 0 0 0 By MS/MS 2 0 1 1 92.369 87.458 2 5.9699E-06 108680 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.72 96.923 22200000 0 22200000 0 0 0 0 0 0 0 0 0 0 0 0 0 15256 5119 13895 127321 101471 101471 1 EVNEQTHFASMPR Unmodified 1544.7042 0.70417569 265 O15226 NKRF NF-kappa-B-repressing factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 41.174 41.512 3 0.0061669 45250 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.761 39.047 40554000 0 0 0 0 0 3824900 0 0 0 6443900 6313800 0 8919700 6552700 8498500 15257 265 13896 127322;127323;127324;127325;127326;127327 101472;101473 101472 2 EVNEVIQNPATITR Unmodified 1582.8315 0.83148469 5212 Q9Y4X5 ARIH1 E3 ubiquitin-protein ligase ARIH1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.869 60.972 2 4.8592E-20 68756 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 141.73 117.87 182830000 0 0 0 9354700 8593100 10180000 9380700 8265700 7279000 15328000 21517000 23752000 20545000 17724000 30909000 15258 5212 13897 127328;127329;127330;127331;127332;127333;127334;127335;127336;127337;127338;127339 101474;101475;101476;101477;101478;101479;101480;101481;101482;101483;101484;101485 101477 12 EVNEVSQNFQTTK Unmodified 1522.7264 0.72635092 4275 Q9BZQ8 FAM129A Protein Niban yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 37.876 37.654 2 1.2079E-15 42063 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 171.62 140.54 106070000 0 18131000 0 3690700 3798800 8439500 6686900 5573100 3104000 7562700 8023200 8173500 13515000 7481600 11889000 15259 4275 13898 127340;127341;127342;127343;127344;127345;127346;127347;127348;127349;127350;127351;127352 101486;101487;101488;101489;101490;101491;101492;101493;101494;101495;101496;101497;101498 101486 13 EVNFTSELRK Unmodified 1221.6354 0.63535107 5009 Q9ULW0 TPX2 Targeting protein for Xklp2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.646 47.809 3 0.0059147 53637 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 50.452 34.164 259610000 0 0 0 11790000 14208000 19866000 20134000 20083000 15367000 24112000 26000000 35011000 21728000 15220000 36091000 15260 5009 13899 127353;127354;127355;127356;127357;127358;127359;127360;127361;127362;127363;127364 101499;101500;101501;101502;101503;101504;101505 101500 7 EVNGHEVGNNPK Unmodified 1292.6109 0.61092723 4783 Q9NZW5 MPP6 MAGUK p55 subfamily member 6 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 9.273 5.9644 3 0.0027297 7884 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 54.7 40.138 46846000 0 46846000 0 0 0 0 0 0 0 0 0 0 0 0 0 15261 4783 13900 127365;127366 101506;101507;101508 101508 2 EVNLAVQNAK Unmodified 1084.5877 0.58767259 1561 P49189 ALDH9A1 4-trimethylaminobutyraldehyde dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.38 3.91 5 1 7 1 3 2 1 2 1 1 1 1 36.136 33.76 2 0.0016798 37151 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 103.56 76.961 1053100000 32106000 910860000 3457300 16014000 0 0 0 0 0 0 21358000 17024000 0 16182000 36089000 15262 1561 13901 127367;127368;127369;127370;127371;127372;127373;127374;127375;127376;127377;127378;127379 101509;101510;101511;101512;101513;101514;101515;101516;101517;101518;101519 101514 10 EVNLGLLAK Unmodified 955.57023 0.57023162 4969 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 yes yes 0 0 0 By MS/MS 10 0 1 1 71.159 71.134 2 0.0071238 81977 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 73.26 44.11 6552500 0 0 0 0 0 6552500 0 0 0 0 0 0 0 0 0 15263 4969 13902 127380 101520 101520 1 EVNSQEEEEEELLRK Unmodified 1859.8749 0.87486565 3969 Q96RL1 UIMC1 BRCA1-A complex subunit RAP80 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 2 1 1 49.707 49.616 3 4.38E-05 54889 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.358 63.257 27674000 0 0 0 11299000 0 0 0 0 0 0 16375000 0 0 0 0 15264 3969 13903 127381;127382;127383;127384;127385 101521;101522;101523;101524;101525 101523 5 EVNSTDWDSK Unmodified 1179.5044 0.50439647 3554 Q8WUX9 CHMP7 Charged multivesicular body protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 26.386 26.543 2 0.01255 28276 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 52.278 31.579 58750000 0 0 0 3403100 3964900 6014800 7125800 5017700 4151000 5910900 7061400 5601900 5942200 4556200 0 15265 3554 13904 127386;127387;127388;127389;127390;127391;127392;127393;127394;127395;127396 101526;101527;101528;101529;101530 101529 5 EVNVSPCPTQPCQLSK Unmodified 1842.8604 0.86041834 1860 P61916 NPC2 Epididymal secretory protein E1 yes yes 0 0 0 By MS/MS 10 0 1 1 50.517 49.888 2 0.00081862 57102 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 64.64 50.482 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15266 1860 13905 127397 101531 101531 1 EVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQK Unmodified 3855.8183 0.81828533 2608 Q16531 DDB1 DNA damage-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 97.044 93.535 3 1.9697E-80 114918 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.24 112.48 106430000 0 100170000 6251200 0 0 0 0 0 0 0 0 0 0 0 0 15267 2608 13906 127398;127399;127400 101532;101533;101534;101535 101533 4 EVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQK Oxidation (M) 3871.8132 0.81319996 2608 Q16531 DDB1 DNA damage-binding protein 1 yes yes 0 1 0 By MS/MS 3 0 1 1 95.122 91.866 3 5.763E-34 110000 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 81.91 77.676 25825000 0 25825000 0 0 0 0 0 0 0 0 0 0 0 0 0 15268 2608 13906 127401 101536 101536 4252 1 EVPAHSTEVGR Unmodified 1180.5836 0.58364985 2661 Q32MZ4 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 13.683 13.863 3 0.025317 12993 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 46.73 38.843 46508000 0 0 0 0 3953400 3181300 4358300 3268700 2009000 5865800 8854100 12635000 0 0 2382000 15269 2661 13907 127402;127403;127404;127405;127406;127407;127408;127409;127410 101537 101537 0 EVPAHSTEVGRDHNEEEGEETGLRDEK Unmodified 3048.3657 0.36567775 2661 Q32MZ4 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 yes yes 0 0 2 By MS/MS By MS/MS 6 4 2 2 2 2 30.464 27.689 4;5 4.2904E-11 28925 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.745 41.312 104380000 79651000 0 0 0 0 0 0 0 0 0 0 0 0 0 24731000 15270 2661 13908 127411;127412;127413;127414 101538;101539;101540;101541 101538 4 EVPAVPETLK Unmodified 1081.6019 0.60192568 1072 P18124 RPL7 60S ribosomal protein L7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56.423 55.839 2 0.018376 62481 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 48.423 20.215 1595300000 0 850470000 2035600 34706000 34042000 41906000 39407000 45358000 35632000 65050000 72059000 102690000 88762000 81370000 101860000 15271 1072 13909 127415;127416;127417;127418;127419;127420;127421;127422;127423;127424;127425;127426;127427;127428 101542;101543;101544;101545;101546;101547;101548;101549;101550;101551;101552 101548 6 EVPAVPETLKK Unmodified 1209.6969 0.69688869 1072 P18124 RPL7 60S ribosomal protein L7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.64 2.9 1 1 9 2 1 1 1 1 1 1 1 1 1 45.431 44.682 3 0.0033279 49407 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 49.632 34.254 177700000 0 54351000 0 0 6443800 0 14613000 14697000 8745800 0 15210000 18507000 19123000 14188000 11825000 15272 1072 13910 127429;127430;127431;127432;127433;127434;127435;127436;127437;127438;127439 101553;101554;101555;101556;101557 101557 4 EVPEYLHHVNK Unmodified 1363.6884 0.68844927 2332 Q13620 CUL4B Cullin-4B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.54 31.726 3 0.00023523 33658 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 93.096 69.72 155290000 0 0 0 4913500 4190300 23919000 7934800 7612000 6711100 18293000 14988000 25865000 13416000 10314000 17135000 15273 2332 13911 127440;127441;127442;127443;127444;127445;127446;127447;127448;127449;127450;127451 101558;101559;101560;101561;101562;101563;101564 101564 6 EVPEYLNHVSK Unmodified 1313.6616 0.66156582 2331 Q13619 CUL4A Cullin-4A yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 42.951 43.179 3 0.0015939 48431 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 67.385 48.142 221910000 0 0 0 18740000 0 0 0 27072000 0 28749000 37514000 0 25450000 31675000 52709000 15274 2331 13912 127452;127453;127454;127455;127456;127457;127458 101565;101566;101567;101568;101569;101570 101570 5 EVPFADLSNMEIGMK 2 Oxidation (M) 1711.7797 0.7797084 2284 Q13418 ILK Integrin-linked protein kinase yes yes 0 2 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.806 76.866 2 1.2122E-14 88734 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 99.215 80.948 163660000 0 0 0 7903000 10959000 17044000 14114000 12290000 9499800 17471000 17416000 17453000 11759000 11322000 16434000 15275 2284 13913 127459;127460;127461;127462;127463;127464;127465;127466;127467;127468;127469;127470 101571;101572;101573;101574;101575;101576;101577;101578;101579;101580;101581 101579 3715;3716 11 EVPFADLSNMEIGMK Unmodified 1679.7899 0.78987915 2284 Q13418 ILK Integrin-linked protein kinase yes yes 0 0 0 By MS/MS 10 0 1 1 89.049 89.192 2 6.7553E-07 103223 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.313 62.937 3771400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3771400 15276 2284 13913 127471 101582;101583 101583 2 EVPIFTK Unmodified 832.46945 0.46945494 4805 Q9P253 VPS18 Vacuolar protein sorting-associated protein 18 homolog yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 56.032 51.172 2 0.036349 66931 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.614 29.089 148160000 0 138000000 10152000 0 0 0 0 0 0 0 0 0 0 0 0 15277 4805 13914 127472;127473 101584 101584 1 EVPIHRVADISGDTQK Unmodified 1763.9166 0.91661131 3039 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 4 2 2 49.966 44.018 3;4 3.3133E-05 61030 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.347 78.948 1262300000 1022600000 0 239680000 0 0 0 0 0 0 0 0 0 0 0 0 15278 3039 13915 127474;127475;127476;127477 101585;101586;101587 101585 2 EVPIVQTETK Unmodified 1142.6183 0.61830402 334 O43491 EPB41L2 Band 4.1-like protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 44.77 39.449 2 0.0085181 51415 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.149 38.844 31139000 0 31139000 0 0 0 0 0 0 0 0 0 0 0 0 0 15279 334 13916 127478 101588;101589;101590 101589 3 EVPMVVVPPVGAK Unmodified 1320.7475 0.74754405 4817 Q9P2E9 RRBP1 Ribosome-binding protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 83.664 78.944 2 0.039839 98106 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 43.651 43.651 24292000 0 24292000 0 0 0 0 0 0 0 0 0 0 0 0 0 15280 4817 13917 127479 101591 101591 1 EVPPGSAIIHIK Unmodified 1259.7238 0.72377215 2427 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 5.4 3.77 4 2 4 2 2 2 1 1 1 1 65.182 62.044 3 0.0013034 84418 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.593 53.302 86151000 33784000 22225000 19320000 1432900 0 0 2289000 0 0 0 3492400 0 0 3609000 0 15281 2427 13918 127480;127481;127482;127483;127484;127485;127486;127487;127488;127489 101592;101593;101594;101595;101596;101597;101598;101599;101600;101601;101602;101603 101596 12 EVPPTETVPQVK Unmodified 1322.7082 0.70818166 4971 Q9UKL0 RCOR1 REST corepressor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 48.381 48.518 2 0.010136 53990 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.699 34.669 112370000 0 0 0 6676000 6410900 10276000 9104100 9666800 8565600 11197000 0 12848000 12469000 8563100 16595000 15282 4971 13919 127490;127491;127492;127493;127494;127495;127496;127497;127498;127499;127500 101604;101605;101606 101605 2 EVPQDQHLEAPADQSK Unmodified 1790.8435 0.84350594 5163 Q9Y3D9 MRPS23 28S ribosomal protein S23, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 31.761 31.191 3 0.00052971 39355 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.469 55.007 94034000 0 23717000 0 0 5102200 7242900 7361100 0 4151400 8214500 8281200 7726800 7130900 7749900 7355600 15283 5163 13920 127501;127502;127503;127504;127505;127506;127507;127508;127509;127510;127511;127512 101607;101608;101609;101610;101611 101607 4 EVPQMCIPGK Unmodified 1157.5573 0.55730044 1355 P35573 AGL Glycogen debranching enzyme;4-alpha-glucanotransferase;Amylo-alpha-1,6-glucosidase yes yes 0 0 0 By MS/MS 2 0 1 1 60.167 54.309 2 0.04758 70457 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 63.565 39.772 21328000 0 21328000 0 0 0 0 0 0 0 0 0 0 0 0 0 15284 1355 13921 127513 101612 101612 1 EVPRAPEDVIQALEEK Unmodified 1821.9472 0.94724273 3178 Q86W50 METTL16 Methyltransferase-like protein 16 yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 82.697 82.827 3 0.00057334 95565 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.288 46.803 22058000 0 0 0 0 0 2085900 0 0 1219000 2818200 0 2010800 0 0 13924000 15285 3178 13922 127514;127515;127516;127517;127518 101613;101614;101615 101615 3 EVPTTASSYVDSALK Unmodified 1566.7777 0.77771779 2443 Q14746 COG2 Conserved oligomeric Golgi complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.86 3.4 1 1 5 2 1 1 1 1 1 70.827 69.679 2 6.4218E-10 87075 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.97 92.01 142560000 0 107000000 0 0 0 7013800 0 0 5240800 0 6625100 0 0 7362800 9317300 15286 2443 13923 127519;127520;127521;127522;127523;127524;127525 101616;101617;101618;101619;101620;101621 101617 6 EVPVPTPAPVEVPVPER Unmodified 1810.9829 0.98289996 245 O15047 SETD1A Histone-lysine N-methyltransferase SETD1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 1 2 2 2 2 2 2 2 81.591 81.646 2;3 9.504E-25 94456 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 119.69 111.38 256950000 0 0 0 11598000 16025000 22110000 15735000 13814000 17724000 23999000 25997000 33105000 17710000 24690000 34441000 15287 245 13924 127526;127527;127528;127529;127530;127531;127532;127533;127534;127535;127536;127537;127538;127539;127540;127541;127542;127543;127544;127545;127546;127547;127548 101622;101623;101624;101625;101626;101627;101628;101629;101630;101631;101632;101633;101634;101635;101636;101637;101638 101624 17 EVPWSPSAEK Unmodified 1128.5451 0.54513908 2736 Q5JSZ5 PRRC2B Protein PRRC2B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 47.731 47.522 2 0.021915 54340 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 46.39 21.571 21801000 0 0 0 4120000 4140700 0 6208800 0 0 0 0 0 0 7331300 0 15288 2736 13925 127549;127550;127551;127552 101639 101639 1 EVQDGIAPR Unmodified 983.50361 0.50360861 1488 P45974 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 2 1 1 1 1 1 1 1 1 23.568 22.838 2 0.016224 24914 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 56.721 23.079 814910000 30003000 473140000 2262300 13322000 0 37111000 16964000 13690000 0 32291000 32206000 41319000 28197000 13473000 80927000 15289 1488 13926 127553;127554;127555;127556;127557;127558;127559;127560;127561;127562;127563;127564;127565;127566 101640;101641;101642;101643;101644;101645;101646 101646 6 EVQDGIAPRMFK Oxidation (M) 1405.7024 0.70238478 1488 P45974 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes yes 0 1 1 By MS/MS 2 0 1 1 48.821 40.996 3 0.0070568 56843 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.885 33.631 30480000 30480000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15290 1488 13927 127567 101647 101647 2334 1 EVQDGIAPRMFK Unmodified 1389.7075 0.70747015 1488 P45974 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 64.109 58.077 3 0.02127 78282 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.653 31.372 32366000 23114000 0 9251300 0 0 0 0 0 0 0 0 0 0 0 0 15291 1488 13927 127568;127569 101648 101648 1 EVQDLAFLDVVSK Unmodified 1461.7715 0.7715102 1685 P52306 RAP1GDS1 Rap1 GTPase-GDP dissociation stimulator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 92.251 87.568 2 7.3858E-18 109793 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 155.48 120.04 73675000 7963600 61810000 3901400 0 0 0 0 0 0 0 0 0 0 0 0 15292 1685 13928 127570;127571;127572;127573 101649;101650;101651 101649 3 EVQDLFEAQGNDR Unmodified 1519.6903 0.69029976 4387 Q9H3U1 UNC45A Protein unc-45 homolog A yes yes 0 0 0 By MS/MS 10 0 1 1 58.635 58.676 2 2.0445E-08 66945 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 108.7 88.49 8572200 0 0 0 0 0 8572200 0 0 0 0 0 0 0 0 0 15293 4387 13929 127574 101652;101653 101652 2 EVQDLFEAQGNDRLK Unmodified 1760.8693 0.86932676 4387 Q9H3U1 UNC45A Protein unc-45 homolog A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 68.859 63.294 3 5.2011E-05 81087 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.083 67.797 48083000 28719000 6640800 12723000 0 0 0 0 0 0 0 0 0 0 0 0 15294 4387 13930 127575;127576;127577;127578 101654;101655;101656;101657 101654 4 EVQEAFLTLHK Unmodified 1313.698 0.69795133 4282 Q9C0B1 FTO Alpha-ketoglutarate-dependent dioxygenase FTO yes yes 0 0 0 By MS/MS 2 0 1 1 70.213 64.344 3 0.0015937 81890 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.962 64.307 26932000 0 26932000 0 0 0 0 0 0 0 0 0 0 0 0 0 15295 4282 13931 127579 101658 101658 1 EVQEAQVNEEEVK Unmodified 1529.7209 0.72093119 3459 Q8NHQ8 RASSF8 Ras association domain-containing protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 2 1 30.89 31.074 2 0.00017133 34211 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 83.862 53.656 48681000 0 0 0 0 5503000 6610500 5550100 0 0 10174000 8246500 0 6521300 0 6075600 15296 3459 13932 127580;127581;127582;127583;127584;127585;127586;127587;127588 101659;101660;101661;101662;101663;101664;101665 101665 7 EVQEFYK Unmodified 941.44945 0.44944778 1130 P21926 CD9 CD9 antigen yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 33.818 33.297 2 0.026498 36596 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 78.616 58.769 203650000 0 88817000 0 10102000 6038700 8162700 5919400 9288500 7164400 8079500 12329000 11750000 11934000 13541000 10520000 15297 1130 13933 127589;127590;127591;127592;127593;127594;127595;127596;127597;127598;127599;127600;127601;127602 101666;101667;101668;101669;101670;101671;101672 101666 7 EVQETTVTEGAAK Unmodified 1361.6674 0.66743906 4727 Q9NXH9 TRMT1 tRNA (guanine(26)-N(2))-dimethyltransferase yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 23.32 23.542 2 0.0014553 24160 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 63.212 45.699 29434000 0 0 0 2095600 1146300 2123900 0 1369800 1207900 1886300 2570600 5094400 3991500 3345300 4602500 15298 4727 13934 127603;127604;127605;127606;127607;127608;127609;127610;127611;127612;127613 101673;101674;101675;101676;101677 101677 5 EVQGISEHYLR Unmodified 1329.6677 0.66771383 3295 Q8IZH2 XRN1 5'-3' exoribonuclease 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.384 45.554 3 0.020761 51163 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 38.021 30.11 131430000 0 0 0 8870300 5445200 7734100 7718800 12780000 6502300 14828000 12937000 11297000 12244000 12797000 18278000 15299 3295 13935 127614;127615;127616;127617;127618;127619;127620;127621;127622;127623;127624;127625 101678;101679 101678 2 EVQGNESDLFMSYFPR Oxidation (M) 1933.8516 0.85162779 1407 P40121 CAPG Macrophage-capping protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 84.324 84.46 2 2.3979E-24 97475 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 123.95 110.97 64245000 0 0 0 0 0 7267300 0 4926400 0 9480500 7854200 7709600 0 6414400 20593000 15300 1407 13936 127626;127627;127628;127629;127630;127631;127632 101680;101681;101682;101683;101684;101685;101686;101687 101682 2198 8 EVQGNESDLFMSYFPR Unmodified 1917.8567 0.85671317 1407 P40121 CAPG Macrophage-capping protein yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 89.493 89.589 2 2.5281E-19 103725 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 128.67 116.46 5937900 0 0 0 0 0 856640 0 0 0 0 0 0 0 0 5081300 15301 1407 13936 127633;127634 101688;101689 101688 2 EVQILQQNR Unmodified 1126.6095 0.60947067 2492 Q15058 KIF14 Kinesin-like protein KIF14 yes yes 0 0 0 By MS/MS 10 0 1 1 38.233 38.529 2 0.023827 41726 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 77.058 32.611 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15302 2492 13937 127635 101690 101690 1 EVQLAQIFEPLSR Unmodified 1528.8249 0.82494275 2647 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 2 1 91.352 91.486 2 0.0014129 106396 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 63.408 45.544 20038000 0 0 0 0 0 952840 0 1358400 1250900 3371700 1923200 1616400 0 3235500 6328700 15303 2647 13938 127636;127637;127638;127639;127640;127641;127642;127643;127644 101691;101692;101693;101694;101695;101696 101694 6 EVQMGDFVR Oxidation (M) 1095.5019 0.50189405 3744 Q96AY3 FKBP10 Peptidyl-prolyl cis-trans isomerase FKBP10 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 32.944 33.228 2 0.024017 36316 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 45.68 26.949 37786000 0 0 0 0 0 7767500 4405900 4059300 0 0 7018000 0 0 5160600 9374400 15304 3744 13939 127645;127646;127647;127648;127649;127650 101697;101698 101698 2 EVQMGDFVR Unmodified 1079.507 0.50697943 3744 Q96AY3 FKBP10 Peptidyl-prolyl cis-trans isomerase FKBP10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 2 1 1 1 1 1 1 1 1 1 1 1 59.619 59.502 2 0.0033925 67745 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 105.14 62.069 73217000 0 0 0 9392000 4075900 14734000 8612200 7160700 7385400 12554000 0 0 9303500 0 0 15305 3744 13939 127651;127652;127653;127654;127655;127656;127657;127658;127659;127660;127661;127662;127663 101699;101700;101701;101702;101703;101704;101705;101706;101707;101708;101709;101710 101700 12 EVQNQLVDREHK Unmodified 1493.7587 0.7586541 3489 Q8TCG1 KIAA1524 Protein CIP2A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 19.196 19.115 3 8.725E-05 24582 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 97.163 63.272 105980000 0 0 34561000 0 3995700 10179000 4177400 4643800 4426900 9453300 0 8515000 9052500 4825600 12150000 15306 3489 13940 127664;127665;127666;127667;127668;127669;127670;127671;127672;127673;127674;127675 101711;101712;101713;101714;101715;101716;101717;101718;101719 101716 8 EVQPRAQK Unmodified 954.52468 0.52467841 1625 P50502;Q8NFI4;Q8IZP2 ST13;ST13P5;ST13P4 Hsc70-interacting protein;Putative protein FAM10A5;Putative protein FAM10A4 yes no 0 0 1 By MS/MS By MS/MS By MS/MS 2.33 0.471 2 1 1 1 1 5.9793 2.9558 2 0.014842 4960 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 125.01 74.881 750570000 645410 313300000 436620000 0 0 0 0 0 0 0 0 0 0 0 0 15307 1625 13941 127676;127677;127678 101720;101721 101721 2 EVQQGEEFER Unmodified 1249.5575 0.55749468 734 P00568 AK1 Adenylate kinase isoenzyme 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 25.406 25.815 2 0.0017096 26191 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 94.85 75.871 28568000 0 0 0 0 0 0 0 0 0 3806400 5914400 0 0 5942700 12905000 15308 734 13942 127679;127680;127681;127682;127683 101722;101723;101724;101725;101726 101725 5 EVQQGEEFERR Unmodified 1405.6586 0.65860571 734 P00568 AK1 Adenylate kinase isoenzyme 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.127 21.331 3 7.3745E-06 22327 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 102.52 68.259 272280000 0 0 0 11949000 10103000 30928000 16391000 12041000 12234000 19122000 27906000 32730000 12932000 23296000 62647000 15309 734 13943 127684;127685;127686;127687;127688;127689;127690;127691;127692;127693;127694;127695 101727;101728;101729;101730;101731;101732;101733;101734;101735;101736;101737;101738 101727 10 EVQQLTVK Unmodified 943.53385 0.53384611 3621 Q92547 TOPBP1 DNA topoisomerase 2-binding protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 27.723 28.23 2 0.014742 30464 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 69.998 26.875 39779000 0 0 0 0 0 0 0 0 4810800 0 0 17261000 0 0 17707000 15310 3621 13944 127696;127697;127698 101739;101740 101740 2 EVQSALSTAAADDSK Unmodified 1491.7053 0.70528113 5078 Q9Y232 CDYL Chromodomain Y-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 37.116 37.5 2 0.00017846 40306 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 89.301 65.27 15767000 0 0 0 0 0 0 0 0 0 0 9466700 0 0 6299900 0 15311 5078 13945 127699;127700;127701;127702;127703;127704;127705;127706 101741;101742;101743;101744;101745;101746;101747;101748 101746 8 EVQSNMVPR Oxidation (M) 1074.5128 0.51279309 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 6 1 1 1 1 1 1 16.458 16.522 2 0.028264 16261 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 43.808 15.634 17619000 0 0 0 1457600 0 2925600 2108300 1533100 0 2413500 0 0 7181400 0 0 15312 5189 13946 127707;127708;127709;127710;127711;127712 101749 101749 1 EVQSNMVPR Unmodified 1058.5179 0.51787847 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 0 0 By MS/MS 10 0 1 1 29.122 29.44 2 0.0030679 30737 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 91.9 40.164 4960000 0 0 0 0 0 0 0 0 0 0 0 0 0 4960000 0 15313 5189 13946 127713 101750 101750 1 EVQTIEVYK Unmodified 1107.5812 0.58119023 3177 Q86W42 THOC6 THO complex subunit 6 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.753 45.922 2 0.0031541 50504 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 92.439 34.88 120670000 0 0 0 5522900 8909500 7787900 9243800 7315700 5682200 9666000 9695300 15760000 13236000 14282000 13573000 15314 3177 13947 127714;127715;127716;127717;127718;127719;127720;127721;127722;127723;127724;127725 101751;101752;101753;101754;101755;101756;101757;101758;101759;101760;101761;101762;101763;101764;101765;101766;101767 101761 16 EVQTNDLK Unmodified 945.47673 0.47672516 1842 P61247 RPS3A 40S ribosomal protein S3a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 14.322 14.504 2 0.0053152 13282 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.32 53.608 401450000 0 0 0 52006000 0 0 32113000 44279000 0 0 0 88201000 73945000 0 110910000 15315 1842 13948 127726;127727;127728;127729;127730;127731 101768;101769;101770;101771;101772;101773 101770 3 EVQTVTSIQK Unmodified 1131.6136 0.61355299 410 O60524 NEMF Nuclear export mediator factor NEMF yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.12 3.26 1 1 6 1 1 1 1 1 1 1 1 30.542 29.575 2 0.002134 31997 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 86.136 27.321 35058000 217290 16495000 0 0 0 0 1370600 0 0 3494900 2954900 5628700 3437600 1459100 0 15316 410 13949 127732;127733;127734;127735;127736;127737;127738;127739 101774;101775;101776;101777;101778 101776 5 EVQVEHIK Unmodified 980.5291 0.52909508 3796 Q96DG6 CMBL Carboxymethylenebutenolidase homolog yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.72 2 13 1 1 1 1 1 1 2 1 1 1 1 1 1 1 19.976 19.679 2 0.0052431 18621 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.59 2.3931 398020000 0 7199700 6074300 9466100 8025400 10971000 14488000 17737000 9520700 29346000 60985000 50743000 22542000 38862000 112060000 15317 3796 13950 127740;127741;127742;127743;127744;127745;127746;127747;127748;127749;127750;127751;127752;127753;127754 101779;101780;101781;101782;101783;101784;101785;101786;101787;101788;101789 101783 10 EVRAASTEADK Unmodified 1175.5782 0.57823012 4252 Q9BYT8 NLN Neurolysin, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By matching 2 0 3 1 1 1 6.9997 4.0078 3 0.012649 5997 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 43.897 20.671 113940000 12427000 91346000 10163000 0 0 0 0 0 0 0 0 0 0 0 0 15318 4252 13951 127755;127756;127757 101790 101790 1 EVRPDTQYTGRK Unmodified 1448.7372 0.73719038 358 O43709 WBSCR22 Probable 18S rRNA (guanine-N(7))-methyltransferase yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.672 14.839 3 0.0023582 13846 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 82.85 67.79 337990000 0 0 0 26982000 17111000 19607000 20933000 14909000 24477000 38101000 41327000 28944000 35222000 22360000 48014000 15319 358 13952 127758;127759;127760;127761;127762;127763;127764;127765;127766;127767;127768;127769 101791;101792;101793;101794;101795;101796;101797;101798;101799;101800;101801 101795 9 EVRQLAEDFLK Unmodified 1346.7194 0.71941505 1062 P17844 DDX5 Probable ATP-dependent RNA helicase DDX5 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 80.101 73.68 3 6.8488E-08 93374 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.25 74.702 189180000 46376000 142800000 0 0 0 0 0 0 0 0 0 0 0 0 0 15320 1062 13953 127770;127771 101802;101803 101802 2 EVRSSIRQVSDVQK Unmodified 1629.8798 0.87983187 2262 Q13263 TRIM28 Transcription intermediary factor 1-beta yes yes 0 0 2 By MS/MS 2 0 2 2 33.687 27.455 3;4 1.2217E-11 38859 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 119.62 87.321 191330000 191330000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15321 2262 13954 127772;127773 101804;101805 101805 0 EVRVCEPCYEQLNRK Unmodified 1978.9353 0.93531461 230 O14964 HGS Hepatocyte growth factor-regulated tyrosine kinase substrate yes yes 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 50.623 44.665 4 0.00017733 61380 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.527 53.61 38670000 26601000 0 12069000 0 0 0 0 0 0 0 0 0 0 0 0 15322 230 13955 127774;127775 101806;101807;101808 101807 3 EVSALHPLPAQPHLK Unmodified 1635.9097 0.90967544 3829 Q96EY9 ADAT3 Probable inactive tRNA-specific adenosine deaminase-like protein 3 yes yes 0 0 0 By MS/MS 2 0 2 2 66.804 58.509 3;4 0.00059037 78516 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.877 55.464 122190000 122190000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15323 3829 13956 127776;127777 101809;101810 101810 0 EVSAWATR Unmodified 918.45593 0.45593014 533 O75694 NUP155 Nuclear pore complex protein Nup155 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 31.72 32.12 2 0.047929 33969 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.657 26.71 26895000 0 0 0 0 0 0 0 3903800 0 4415900 0 5158900 3526800 3752100 6137400 15324 533 13957 127778;127779;127780;127781;127782;127783 101811 101811 1 EVSDDEAEEK Unmodified 1149.4673 0.46734227 850 P07900 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS 9.31 2.4 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 15.104 15.291 2 0.0013256 5659 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 107.57 79.356 125090000 0 67819000 0 2006900 1832100 7216800 2702600 3492900 4196800 3472600 15005000 2444800 3514800 4644800 6739000 15325 850 13958 127784;127785;127786;127787;127788;127789;127790;127791;127792;127793;127794;127795;127796 101812;101813;101814;101815 101812 3 EVSDDEAEEKEDKEEEK Unmodified 2036.8546 0.85458372 850 P07900 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 0 0 2 By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.89 3.9 7 11 4 2 1 1 1 1 1 1 2 1 1 1 1 11.129 9.8537 3;4 4.2563E-06 14688 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.007 84.048 134850000 67668000 20198000 1323800 2155100 1367300 0 3863300 2249600 0 3293100 13099000 5830200 3652300 3180700 6967100 15326 850 13959 127797;127798;127799;127800;127801;127802;127803;127804;127805;127806;127807;127808;127809;127810;127811;127812;127813;127814 101816;101817;101818;101819;101820;101821;101822;101823;101824;101825 101821 7 EVSDFIQDSGQIK Unmodified 1464.7096 0.70963822 491 O75391 SPAG7 Sperm-associated antigen 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 65.281 64.238 2 5.9001E-08 73089 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 128.03 98.368 624540000 0 531900000 2039800 3332400 4366900 5987000 0 5505900 3837400 9101100 12631000 16777000 0 8102900 20959000 15327 491 13960 127815;127816;127817;127818;127819;127820;127821;127822;127823;127824;127825;127826;127827;127828 101826;101827;101828;101829;101830;101831;101832;101833;101834;101835;101836;101837;101838;101839;101840;101841 101836 16 EVSDLIK Unmodified 802.44363 0.44363412 3643 Q92621 NUP205 Nuclear pore complex protein Nup205 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 43.003 38.043 2 0.027727 49401 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.068 19.694 60043000 0 60043000 0 0 0 0 0 0 0 0 0 0 0 0 0 15328 3643 13961 127829;127830 101842 101842 1 EVSDSLLTSSK Unmodified 1164.5874 0.58739782 4020 Q99541 PLIN2 Perilipin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 43.873 43.196 2 0.00034474 47449 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.496 64.465 338920000 0 83506000 0 0 16952000 17999000 19887000 26271000 21322000 31579000 32441000 35575000 0 27611000 25774000 15329 4020 13962 127831;127832;127833;127834;127835;127836;127837;127838;127839;127840;127841;127842 101843;101844;101845;101846;101847;101848;101849;101850;101851;101852;101853;101854 101847 6 EVSEEHNLLPQPPR Unmodified 1643.8267 0.82673367 1556 P49005 POLD2 DNA polymerase delta subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 2 1 1 1 1 54.685 54.831 3 0.00022551 62026 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 62.528 55.326 145360000 0 0 0 8484500 8323900 19605000 14360000 9106900 8188700 14716000 23064000 13605000 0 8537800 17365000 15330 1556 13963 127843;127844;127845;127846;127847;127848;127849;127850;127851;127852;127853;127854;127855 101855;101856;101857;101858;101859;101860;101861;101862;101863;101864;101865;101866;101867;101868;101869 101858 12 EVSEEQPVVTLEK Unmodified 1485.7563 0.75625407 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.58 1 2 2 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 58.514 57.238 2 1.3422E-15 60417 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 146.71 108.99 561960000 22598000 177170000 0 14185000 9694100 13091000 16245000 14322000 10629000 22572000 53237000 49958000 25833000 37101000 95325000 15331 1564 13964 127856;127857;127858;127859;127860;127861;127862;127863;127864;127865;127866;127867;127868;127869;127870;127871;127872 101870;101871;101872;101873;101874;101875;101876;101877;101878;101879;101880;101881;101882;101883;101884 101874 15 EVSESRNLEK Unmodified 1189.5939 0.59388018 3969 Q96RL1 UIMC1 BRCA1-A complex subunit RAP80 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 13.092 9.7343 2 0.0019492 13130 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.5 51.502 10137000 0 10137000 0 0 0 0 0 0 0 0 0 0 0 0 0 15332 3969 13965 127873;127874 101885 101885 1 EVSHEMDGLIFQPTGK Oxidation (M) 1802.8509 0.85089951 450 O60942 RNGTT mRNA-capping enzyme;Polynucleotide 5'-triphosphatase;mRNA guanylyltransferase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 58.516 58.488 3 0.00036893 66488 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 51.727 47.824 40540000 0 0 0 5482900 6958300 0 8959000 5758800 0 9809300 0 0 0 0 3571500 15333 450 13966 127875;127876;127877;127878;127879;127880 101886 101886 572 1 EVSHEMDGLIFQPTGK Unmodified 1786.856 0.85598488 450 O60942 RNGTT mRNA-capping enzyme;Polynucleotide 5'-triphosphatase;mRNA guanylyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.887 72.95 3 3.9046E-05 83382 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.322 72.542 108770000 0 0 0 3096200 4043200 9405000 4603700 11705000 7676600 8884200 9929900 11175000 7086900 11015000 20147000 15334 450 13966 127881;127882;127883;127884;127885;127886;127887;127888;127889;127890;127891;127892 101887;101888 101888 2 EVSHLNALEER Unmodified 1295.647 0.64697839 1234 P28340 POLD1 DNA polymerase delta catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 35.79 36.099 3 0.011758 39845 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 43.501 26.065 285140000 0 0 0 0 0 26125000 28221000 24679000 19997000 40211000 31240000 41149000 35531000 0 37983000 15335 1234 13967 127893;127894;127895;127896;127897;127898;127899;127900;127901 101889;101890;101891 101891 3 EVSNIYGDK Unmodified 1023.4873 0.48728985 2561 Q15652 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 24.387 24.702 2 0.04445 25644 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 43.442 20.423 28075000 0 0 0 0 0 2657200 3850500 1953400 0 1880100 3416900 2986000 4024300 3676700 3630100 15336 2561 13968 127902;127903;127904;127905;127906;127907;127908;127909;127910 101892;101893 101893 2 EVSPDPSTTGAASPASSSAGGSAARGEDK Unmodified 2646.2005 0.2005099 1168 P23769 GATA2 Endothelial transcription factor GATA-2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 31.764 32.214 3 3.8184E-51 35183 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 100.27 97.761 32285000 0 0 0 0 0 0 0 0 0 5059100 6043600 6511200 4608000 2296300 7767000 15337 1168 13969 127911;127912;127913;127914;127915;127916 101894;101895;101896;101897;101898;101899 101894 6 EVSSATNALR Unmodified 1046.5356 0.53563702 877 P09012 SNRPA U1 small nuclear ribonucleoprotein A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.427 24.628 2 4.0342E-06 24413 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 149.65 93.977 841410000 0 0 0 50290000 50255000 52990000 68314000 60601000 47777000 81353000 60323000 82696000 82677000 79882000 124250000 15338 877 13970 127917;127918;127919;127920;127921;127922;127923;127924;127925;127926;127927;127928 101900;101901;101902;101903;101904;101905;101906;101907;101908;101909;101910;101911;101912;101913;101914 101910 15 EVSSRPSTPGLSVVSGISATSEDIPNK Unmodified 2713.377 0.3770177 2463 Q14C86 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 77.355 77.461 3 3.5367E-109 89436 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 140.55 127.49 123310000 0 0 0 0 4583000 11937000 6297800 8356400 7612100 18327000 13616000 14042000 7318700 9703200 21519000 15339 2463 13971 127929;127930;127931;127932;127933;127934;127935;127936;127937;127938;127939 101915;101916;101917;101918;101919;101920;101921;101922;101923;101924;101925;101926 101916 12 EVSSSAEMESK Oxidation (M) 1198.5023 0.50234756 5370 yes yes 0 1 0 By MS/MS 2 0 1 1 55.239 49.424 2 0.047257 63600 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 45.68 34.459 + 18348000 0 18348000 0 0 0 0 0 0 0 0 0 0 0 0 0 15340 5370 13972 127940 101927 101927 1 EVSSSTELHSNEK Unmodified 1445.6634 0.66341631 1083 P19174 PLCG1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 yes yes 0 0 0 By matching By MS/MS 2.25 0.433 3 1 1 3 14.608 11.056 2;3 1.0327E-07 13745 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 114.72 101.76 195240000 23014000 172230000 0 0 0 0 0 0 0 0 0 0 0 0 0 15341 1083 13973 127941;127942;127943;127944 101928;101929;101930;101931 101931 2 EVSTNTAMIQTSK Oxidation (M) 1424.6817 0.68170891 73;981 CON__P13646-1;P13646;CON__ENSEMBL:ENSP00000377550 KRT13 Keratin, type I cytoskeletal 13 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 2 2 2 2 2 2 26.023 26.129 2 7.7962E-20 27579 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 154.24 118.8 + 472630000 0 0 0 15300000 8901500 0 169910000 198540000 0 0 0 29769000 50206000 0 0 15342 73;981 13974 127945;127946;127947;127948;127949;127950;127951;127952;127953;127954;127955;127956 101932;101933;101934;101935;101936;101937;101938;101939;101940;101941 101932 93 10 EVSTNTAMIQTSK Unmodified 1408.6868 0.68679429 73;981 CON__P13646-1;P13646;CON__ENSEMBL:ENSP00000377550 KRT13 Keratin, type I cytoskeletal 13 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 36.916 37.133 2 1.8245E-26 40884 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 164.43 129.13 + 447300000 0 0 0 5107300 0 0 113190000 238330000 0 0 4917200 48820000 36932000 0 0 15343 73;981 13974 127957;127958;127959;127960;127961;127962;127963 101942;101943;101944;101945;101946;101947;101948 101946 7 EVSTNTAMIQTSKTEITELRR Unmodified 2407.2377 0.23768745 73;981 CON__P13646-1;P13646;CON__ENSEMBL:ENSP00000377550 KRT13 Keratin, type I cytoskeletal 13 no no 0 0 2 By MS/MS 10 0 1 1 65.689 65.833 4 0.011872 75724 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 20.625 15.393 + 6913800 0 0 0 0 0 0 0 0 0 0 0 0 6913800 0 0 15344 73;981 13975 127964 101949 101949 1 EVSTYIK Unmodified 838.44363 0.44363412 1960 P68104;Q5VTE0 EEF1A1;EEF1A1P5 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.41 3.95 1 7 2 12 4 4 2 1 1 1 1 1 1 1 1 1 1 1 1 33.317 32.394 1;2 0.023406 31645 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 86.866 17.434 86896000000 553730000 20972000000 25816000 5106300000 4177700000 4907100000 4721000000 6410600000 3428200000 6227400000 6338500000 7869700000 5617000000 4964400000 5576200000 15345 1960 13976 127965;127966;127967;127968;127969;127970;127971;127972;127973;127974;127975;127976;127977;127978;127979;127980;127981;127982;127983;127984;127985;127986 101950;101951;101952;101953;101954;101955;101956;101957;101958;101959;101960;101961;101962;101963;101964;101965;101966;101967;101968;101969;101970;101971;101972;101973;101974;101975;101976;101977 101955 28 EVSTYIKK Unmodified 966.5386 0.53859714 1960 P68104;Q5VTE0 EEF1A1;EEF1A1P5 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.129 19.325 2 0.045841 18446 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 101.28 51.694 1023700000 0 0 0 79174000 60704000 21051000 70622000 49780000 25279000 101600000 106470000 212330000 118560000 68474000 109670000 15346 1960 13977 127987;127988;127989;127990;127991;127992;127993;127994;127995;127996;127997;127998 101978;101979;101980;101981 101978 0 EVSVELAK Unmodified 873.48075 0.48074791 5209 Q9Y4R8 TELO2 Telomere length regulation protein TEL2 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 37.369 37.605 2 0.011003 40987 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 77.923 37.965 80235000 0 0 0 0 5964600 9196800 6521100 0 0 11008000 0 19091000 6795300 6585500 15072000 15347 5209 13978 127999;128000;128001;128002;128003;128004;128005;128006;128007 101982;101983;101984;101985;101986;101987 101986 6 EVTAAPAVAVPPEATVAITTALSK Unmodified 2306.2733 0.2733279 469 O75170 PPP6R2 Serine/threonine-protein phosphatase 6 regulatory subunit 2 yes yes 0 0 0 By MS/MS 2 0 1 1 97.975 93.202 3 0.00015396 115373 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 53.222 51.795 36813000 0 36813000 0 0 0 0 0 0 0 0 0 0 0 0 0 15348 469 13979 128008 101988 101988 1 EVTAAQVAR Unmodified 943.50869 0.50869399 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.37 20.572 2 0.0041888 20067 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 113.91 77.72 329800000 0 0 0 20295000 23037000 24183000 20738000 30109000 16669000 26432000 36573000 2437600 38191000 41890000 49248000 15349 19 13980 128009;128010;128011;128012;128013;128014;128015;128016;128017;128018;128019;128020 101989;101990;101991;101992;101993;101994;101995;101996;101997 101995 9 EVTAAREALATLK Unmodified 1371.7722 0.7721789 5017 Q9UMS4 PRPF19 Pre-mRNA-processing factor 19 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 66.344 60.354 3 0.040611 74130 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 34.179 17.401 145840000 97168000 32308000 16363000 0 0 0 0 0 0 0 0 0 0 0 0 15350 5017 13981 128021;128022;128023 101998;101999;102000 102000 2 EVTAIETK Unmodified 889.47566 0.47566253 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 20.481 20.295 2 0.010724 21028 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 78.728 43.579 264380000 0 103390000 0 11345000 0 0 15270000 0 12748000 17548000 23258000 31876000 0 21038000 27908000 15351 2431 13982 128024;128025;128026;128027;128028;128029;128030;128031;128032 102001;102002;102003;102004 102001 4 EVTDEIVK Unmodified 931.48623 0.48622722 1155 P23381 WARS Tryptophan--tRNA ligase, cytoplasmic;T1-TrpRS;T2-TrpRS yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 3.8 3.12 3 1 1 1 2 1 1 35.745 32.037 2 0.002399 41106 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.28 23.477 511530000 51655000 374460000 3378000 0 0 0 0 0 0 0 0 0 0 0 82040000 15352 1155 13983 128033;128034;128035;128036;128037 102005;102006;102007;102008 102005 3 EVTDMNLNVINEGGIDK Oxidation (M) 1875.8884 0.88840723 4003 Q96TA1 FAM129B Niban-like protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 67.838 67.292 2 1.9261E-19 77401 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 104.24 96.21 99828000 9071100 0 0 0 4816000 13972000 8197000 4194700 4068100 11150000 7970900 11295000 8860800 6184400 10048000 15353 4003 13984 128038;128039;128040;128041;128042;128043;128044;128045;128046;128047;128048;128049 102009;102010;102011;102012;102013;102014;102015;102016;102017;102018;102019;102020 102010 5480 11 EVTDMNLNVINEGGIDK Unmodified 1859.8935 0.8934926 4003 Q96TA1 FAM129B Niban-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.08 3.33 2 1 9 1 2 1 1 1 1 1 1 1 1 1 78.707 77.428 2 1.0866E-229 89754 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 234.82 200.12 355830000 21226000 211140000 0 0 5724600 20103000 0 8328400 0 19323000 15948000 7275200 6338000 9526400 30898000 15354 4003 13984 128050;128051;128052;128053;128054;128055;128056;128057;128058;128059;128060;128061 102021;102022;102023;102024;102025;102026;102027;102028;102029;102030;102031;102032;102033 102026 11 EVTDTQMPLVAPVILPEMYK 2 Oxidation (M) 2305.1586 0.15855742 3946 Q96P70 IPO9 Importin-9 yes yes 0 2 0 By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 13 1 2 1 1 2 1 1 1 2 1 86.707 86.74 2;3 1.1551E-05 100322 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.434 45.458 75140000 0 0 0 2428500 6009200 6214700 2309300 0 0 20407000 5109100 5596600 4592500 13681000 8792100 15355 3946 13985 128062;128063;128064;128065;128066;128067;128068;128069;128070;128071;128072;128073;128074 102034;102035;102036;102037 102035 5427;5428 4 EVTEEDLNNHFK Unmodified 1473.6736 0.67358707 2900 Q6NVY1 HIBCH 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 46.504 41.337 3 9.2053E-06 53980 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.07 81.579 40724000 0 40724000 0 0 0 0 0 0 0 0 0 0 0 0 0 15356 2900 13986 128075;128076 102038 102038 1 EVTEFGNK Unmodified 922.43961 0.43961137 4441 Q9H7Z7 PTGES2 Prostaglandin E synthase 2;Prostaglandin E synthase 2 truncated form yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 20.862 21.089 2 0.027721 21860 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 57.177 19.619 149890000 0 0 0 6213800 7716100 0 10479000 12052000 9463800 16279000 17691000 20971000 18430000 13265000 17326000 15357 4441 13987 128077;128078;128079;128080;128081;128082;128083;128084;128085;128086;128087 102039;102040 102040 2 EVTEPLNLNPAK Unmodified 1323.7034 0.70343063 3450 Q8NFW8 CMAS N-acylneuraminate cytidylyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.561 60.665 2 0.0092044 70058 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 46.891 18.493 39205000 0 0 0 2397700 2130900 2904200 2833000 2550700 1946800 4220800 4122300 4786600 3198400 3171900 4942100 15358 3450 13988 128088;128089;128090;128091;128092;128093;128094;128095;128096;128097;128098;128099 102041;102042;102043;102044;102045;102046;102047 102046 7 EVTFVPGLYK Unmodified 1151.6227 0.62266112 946;2084 P11388;Q02880 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2-beta no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.98 77.039 2 0.0086915 88967 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 73.208 37.327 39863000 0 0 0 888710 2036800 2984700 3151000 2960700 1580400 4337300 4417800 5550200 0 4238100 7717500 15359 946;2084 13989 128100;128101;128102;128103;128104;128105;128106;128107;128108;128109;128110 102048;102049;102050;102051 102049 4 EVTGGAISSEK Unmodified 1076.535 0.53496832 2443 Q14746 COG2 Conserved oligomeric Golgi complex subunit 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 17.089 17.31 2 0.0022314 17457 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 68.657 18.942 21759000 0 0 0 0 1244000 2123500 1525600 0 0 2004600 2726800 3007200 2853900 2564100 3709700 15360 2443 13990 128111;128112;128113;128114;128115;128116;128117;128118;128119 102052;102053;102054;102055 102053 4 EVTINQSLLAPLR Unmodified 1452.83 0.83002813 69;88 CON__P08729;CON__Q3KNV1;P08729 KRT7 Keratin, type II cytoskeletal 7 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 83.668 83.775 2 1.1837E-11 96653 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 121.83 108.87 + 65725000 0 0 0 0 3602200 5358000 5463900 5791500 5180300 9371500 6218900 10449000 0 5306700 8983900 15361 69;88 13991 128120;128121;128122;128123;128124;128125;128126;128127;128128;128129;128130 102056;102057;102058;102059;102060;102061;102062;102063;102064;102065;102066;102067;102068 102059 13 EVTIVVLGNK Unmodified 1070.6336 0.63356015 4748 Q9NYR9 NKIRAS2 NF-kappa-B inhibitor-interacting Ras-like protein 2 yes yes 0 0 0 By MS/MS 10 0 1 1 66.803 67.321 2 0.047321 76549 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.867 12.917 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15362 4748 13992 128131 102069 102069 1 EVTLIHSQVALADK Unmodified 1522.8355 0.83550744 4114 Q9BRQ8 AIFM2 Apoptosis-inducing factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 61.401 61.143 3 0.009583 69679 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 48.823 39.023 101100000 0 0 7037600 4534100 4547000 7699300 7809000 9375600 5309500 11515000 14552000 13532000 7292900 7901100 0 15363 4114 13993 128132;128133;128134;128135;128136;128137;128138;128139;128140;128141;128142;128143 102070;102071;102072;102073 102071 2 EVTNASAAGNK Unmodified 1060.5149 0.51490158 2489 Q15054 POLD3 DNA polymerase delta subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 7.92 3.62 1 2 9 2 1 1 1 1 1 1 1 1 1 1 14.871 14.85 2 0.00022681 92771 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 110.55 79.495 54611000 27426000 15755000 0 0 889310 1828900 1960800 1777200 1486300 820540 823200 0 801890 0 1041000 15364 2489 13994 128144;128145;128146;128147;128148;128149;128150;128151;128152;128153;128154;128155 102074;102075;102076;102077;102078;102079;102080 102077 7 EVTPEGLQMVK Oxidation (M) 1245.6275 0.6274885 1135 P22234 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.95 2 4 1 12 2 4 1 1 1 1 1 1 1 1 1 1 1 1 1 53.257 52.465 2 3.2177E-09 102571 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 135 106.78 2636800000 85610000 1950300000 24840000 27339000 19068000 36057000 33865000 24280000 4269100 45585000 85133000 87148000 48240000 58753000 106320000 15365 1135 13995 128156;128157;128158;128159;128160;128161;128162;128163;128164;128165;128166;128167;128168;128169;128170;128171;128172;128173;128174 102081;102082;102083;102084;102085;102086;102087;102088;102089;102090;102091;102092;102093;102094;102095;102096;102097 102092 1627 16 EVTPEGLQMVK Unmodified 1229.6326 0.63257388 1135 P22234 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61.298 60.063 2 5.4647E-12 68547 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 157.68 117.63 3442600000 82210000 2811500000 21832000 26221000 22730000 33482000 29703000 34665000 20037000 46705000 101330000 88667000 36849000 86645000 0 15366 1135 13995 128175;128176;128177;128178;128179;128180;128181;128182;128183;128184;128185;128186;128187;128188 102098;102099;102100;102101;102102;102103;102104;102105;102106;102107;102108;102109;102110;102111;102112 102110 14 EVTPFFIIYCR Unmodified 1443.7221 0.72205759 2075 Q02413 DSG1 Desmoglein-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 92.626 92.694 2 0.0044881 107543 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.547 60.5 6476400 0 0 0 1247400 0 969840 0 777930 663520 0 0 1154100 620450 0 1043100 15367 2075 13996 128189;128190;128191;128192;128193;128194;128195 102113;102114;102115 102113 3 EVTPILAQTQSSGPQTSTTPQVLSPTITSPPNALPR Unmodified 3713.9476 0.94758367 1273 P30260 CDC27 Cell division cycle protein 27 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 1 2 2 2 2 2 2 2 2 2 2 2 87.765 87.853 3;4 3.2873E-40 101651 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.302 60.467 182590000 0 0 0 1035200 11104000 9653500 4646000 11374000 6359900 31781000 21750000 18858000 4848300 12812000 48371000 15368 1273 13997 128196;128197;128198;128199;128200;128201;128202;128203;128204;128205;128206;128207;128208;128209;128210;128211;128212;128213;128214;128215;128216;128217;128218 102116;102117;102118;102119;102120;102121;102122;102123;102124;102125;102126;102127;102128 102121 13 EVTQATQPEAIPQGTNITEEK Unmodified 2283.123 0.12303485 2989 Q6W2J9 BCOR BCL-6 corepressor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 1 2 2 2 2 2 2 1 2 2 58.114 58.293 2;3 6.8768E-06 66466 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 86.944 78.345 176310000 0 0 0 11775000 4026600 19449000 14692000 0 12675000 17182000 21345000 17478000 13017000 16025000 28649000 15369 2989 13998 128219;128220;128221;128222;128223;128224;128225;128226;128227;128228;128229;128230;128231;128232;128233;128234;128235;128236;128237 102129;102130;102131;102132;102133;102134;102135;102136;102137;102138 102130 10 EVTQLRHGVQELEIELQSQLSK Unmodified 2563.3606 0.36057978 1354 P35527;CON__P35527 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 1 By MS/MS 3 0 2 2 93.519 90.291 3;4 1.7372E-10 108051 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 77.847 70.815 + 13615000 0 13615000 0 0 0 0 0 0 0 0 0 0 0 0 0 15370 1354 13999 128238;128239 102139;102140;102141 102140 3 EVTSPNSTVRK Unmodified 1216.6412 0.64116473 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 10.043 10.175 3 0.001089 9059 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 63.408 48.075 98422000 0 0 0 6062800 5107500 7418200 7223700 6289200 4485400 7542600 11707000 13326000 9891200 9859200 9509200 15371 5189 14000 128240;128241;128242;128243;128244;128245;128246;128247;128248;128249;128250;128251 102142;102143;102144;102145;102146;102147;102148;102149;102150;102151;102152;102153;102154 102144 12 EVTTLTADPPDGIK Unmodified 1455.7457 0.74568938 2632 Q16763 UBE2S Ubiquitin-conjugating enzyme E2 S yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 63.703 57.795 2 0.0082385 76329 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.862 68.601 67214000 0 67214000 0 0 0 0 0 0 0 0 0 0 0 0 0 15372 2632 14001 128252;128253 102155;102156 102156 2 EVTWEVLEGEVEK Unmodified 1545.7563 0.75625407 811 P05455 SSB Lupus La protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.11 3.9 7 2 9 4 3 2 1 1 1 1 1 1 1 1 1 85.295 82.82 2;3 1.0458E-21 104238 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 212.82 195.58 948050000 360340000 487880000 17692000 0 0 2684700 0 4372600 4002100 7861200 10964000 12352000 5233800 7532100 27131000 15373 811 14002 128254;128255;128256;128257;128258;128259;128260;128261;128262;128263;128264;128265;128266;128267;128268;128269;128270;128271 102157;102158;102159;102160;102161;102162;102163;102164;102165;102166;102167;102168;102169;102170;102171;102172;102173;102174;102175 102169 15 EVTYELDHPGFQIR Unmodified 1702.8315 0.83148469 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 2 1 1 1 1 1 1 1 1 1 72.933 72.99 2;3 6.5873E-13 84087 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 118.4 98.1 196180000 0 0 0 4663200 6353000 27541000 7346200 12750000 17096000 20940000 13733000 22472000 13494000 18627000 31162000 15374 19 14003 128272;128273;128274;128275;128276;128277;128278;128279;128280;128281;128282;128283;128284 102176;102177;102178;102179;102180;102181;102182;102183;102184;102185;102186;102187;102188 102178 13 EVVAEDGTVVTIK Unmodified 1358.7293 0.72931103 3480 Q8TBB5 KLHDC4 Kelch domain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 63.22 56.134 2 0.001052 72688 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.752 59.119 32791000 6612600 26178000 0 0 0 0 0 0 0 0 0 0 0 0 0 15375 3480 14004 128285;128286 102189;102190 102189 2 EVVAEEMAHR Unmodified 1169.5499 0.54990688 2766 Q5T0N5 FNBP1L Formin-binding protein 1-like yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 28.581 28.957 3 0.021321 30325 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.749 21.078 30440000 0 0 0 0 0 1857800 0 0 0 8490800 0 5527800 4667200 0 9896800 15376 2766 14005 128287;128288;128289;128290;128291 102191;102192;102193 102192 3 EVVAGAPRPGLLSLAK Unmodified 1576.9301 0.93007653 690 O95785 WIZ Protein Wiz yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.126 73.192 3 4.1209E-08 83626 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.944 57.028 275990000 0 0 0 11933000 12902000 28664000 13943000 20039000 26180000 23562000 25918000 35097000 17998000 26424000 33330000 15377 690 14006 128292;128293;128294;128295;128296;128297;128298;128299;128300;128301;128302;128303 102194;102195;102196;102197;102198;102199;102200;102201;102202;102203;102204 102196 11 EVVCTTQNTPTVK Unmodified 1475.729 0.72899346 1732 P54132 BLM Bloom syndrome protein yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 33.334 33.575 2 0.0056457 36445 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 56.783 20.258 31528000 0 0 0 0 3030000 2211600 0 2278800 2113600 4840900 4639800 5722200 0 0 6691400 15378 1732 14007 128304;128305;128306;128307;128308;128309;128310;128311 102205;102206 102205 2 EVVDAGLVGLER Unmodified 1255.6772 0.67721588 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 72.14 72.323 2 0.0036181 83342 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 69.979 48.516 59316000 0 0 0 0 0 9632300 4595700 0 4581600 6414900 5464200 9204300 4469300 5065200 9888400 15379 645 14008 128312;128313;128314;128315;128316;128317;128318;128319;128320;128321;128322 102207;102208;102209;102210;102211;102212;102213;102214;102215;102216;102217 102212 11 EVVDAGLVGLERQVSDLGSK Unmodified 2070.0957 0.095697884 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 90.002 85.948 3 0.00058457 107204 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 49.528 33.585 20895000 0 20895000 0 0 0 0 0 0 0 0 0 0 0 0 0 15380 645 14009 128323;128324 102218 102218 0 EVVDRGLQK Unmodified 1042.5771 0.57710791 3395 Q8NBJ5 COLGALT1 Procollagen galactosyltransferase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 19.614 15.947 2 0.0096729 20230 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 142.79 53.239 47120000 9267100 23516000 14338000 0 0 0 0 0 0 0 0 0 0 0 0 15381 3395 14010 128325;128326;128327;128328 102219;102220 102220 0 EVVDYIIFGTVIQEVK Unmodified 1851.003 0.002966698 1757 P55084 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes yes 0 0 0 By MS/MS 2 0 1 1 99.848 91.717 3 7.6341E-24 118185 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 124.09 116.37 11084000 11084000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15382 1757 14011 128329 102221 102221 1 EVVEAHVDQK Unmodified 1152.5775 0.57750184 0 P0DPI2;A0A0B4J2D5 yes no 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 19.998 15.975 2 0.0031561 21193 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.3 62.188 61260000 6033500 55226000 0 0 0 0 0 0 0 0 0 0 0 0 0 15383 0 14012 128330;128331;128332 102222;102223;102224 102222 2 EVVEATDSREK Unmodified 1261.615 0.61500956 3624 Q92560 BAP1 Ubiquitin carboxyl-terminal hydrolase BAP1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 10.069 10.203 3 0.0045945 9332 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 62.466 36.349 42854000 0 0 0 2726900 2891500 2942900 4582900 3472100 0 4771600 4106300 5859900 3870900 2987900 4641100 15384 3624 14013 128333;128334;128335;128336;128337;128338;128339;128340;128341;128342;128343 102225;102226;102227;102228;102229;102230 102225 4 EVVEDINK Unmodified 944.48148 0.48147619 4983 Q9UL15 BAG5 BAG family molecular chaperone regulator 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 24.624 24.886 2 0.016731 26725 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.799 23.885 54627000 0 0 0 0 0 4242600 4698300 7269000 0 4581100 7301600 0 8855400 0 17679000 15385 4983 14014 128344;128345;128346;128347;128348;128349;128350 102231;102232;102233 102231 3 EVVEEAENGR Unmodified 1130.5204 0.52038089 821 P06454 PTMA Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 1 1 1 1 1 2 1 1 2 2 17.345 17.531 2 1.6543E-84 17612 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 210.37 187.66 6956900000 0 0 0 421330000 283000000 296580000 517200000 507370000 300760000 363330000 919320000 790630000 719750000 520150000 1317500000 15386 821 14015 128351;128352;128353;128354;128355;128356;128357;128358;128359;128360;128361;128362;128363;128364;128365 102234;102235;102236;102237;102238;102239;102240;102241;102242;102243;102244;102245;102246;102247;102248;102249;102250;102251;102252;102253;102254;102255;102256;102257;102258;102259;102260;102261;102262;102263;102264;102265;102266;102267;102268;102269;102270 102257 37 EVVEQGLLK Unmodified 1013.5757 0.57571092 4096 Q9BQG0 MYBBP1A Myb-binding protein 1A yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS 7.5 3.55 1 1 4 2 1 1 1 1 50.777 49.19 2 0.027353 54645 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 49.442 17.087 61136000 0 35783000 0 0 0 0 4696700 4065800 0 0 0 0 0 7573400 9016200 15387 4096 14016 128366;128367;128368;128369;128370;128371 102271;102272 102272 2 EVVESCRGK Unmodified 1062.5128 0.51279309 425 O60701 UGDH UDP-glucose 6-dehydrogenase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 6.8816 3.8897 2 0.0023842 7195 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 127.02 68.735 80474000 14333000 62803000 3339000 0 0 0 0 0 0 0 0 0 0 0 0 15388 425 14017 128372;128373;128374 102273;102274 102274 2 EVVESEGERK Unmodified 1160.5673 0.56733108 3475 Q8TAQ2 SMARCC2 SWI/SNF complex subunit SMARCC2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.42 2 1 1 24 2 2 2 2 2 2 2 2 2 2 2 2 2 7.1313 6.9913 2;3 5.3104E-54 4063 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 196.88 125.5 709450000 0 214640000 0 28823000 25309000 32445000 31295000 28029000 32748000 54113000 68891000 35781000 45318000 42068000 69990000 15389 3475 14018 128375;128376;128377;128378;128379;128380;128381;128382;128383;128384;128385;128386;128387;128388;128389;128390;128391;128392;128393;128394;128395;128396;128397;128398;128399;128400 102275;102276;102277;102278;102279;102280;102281;102282;102283;102284;102285;102286;102287;102288;102289 102285 13 EVVETPLLHPER Unmodified 1417.7565 0.75652884 1369 P35998 PSMC2 26S protease regulatory subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 57.987 58.008 3 0.00064676 67128 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 58.674 44.416 82456000 0 0 0 7162600 5610200 11418000 0 0 0 10811000 17840000 24775000 0 4839500 0 15390 1369 14019 128401;128402;128403;128404;128405;128406;128407 102290;102291;102292;102293;102294 102293 5 EVVEVGQK Unmodified 886.476 0.47599688 4365 Q9H2G2 SLK STE20-like serine/threonine-protein kinase yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 19.295 19.554 2 0.025287 20480 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 58.819 36.295 57186000 0 0 0 0 0 14108000 0 0 0 16023000 0 0 1046500 0 26008000 15391 4365 14020 128408;128409;128410;128411 102295;102296 102295 2 EVVFVEDVK Unmodified 1062.5597 0.55972651 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 61.752 61.909 2 0.02342 70847 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.066 18.226 46191000 0 0 0 0 0 12187000 7919800 0 0 12152000 13932000 0 0 0 0 15392 619 14021 128412;128413;128414;128415 102297;102298;102299 102297 3 EVVHTVSLHEIDVINSR Unmodified 1946.0221 0.022139011 5077 Q9Y230 RUVBL2 RuvB-like 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 2 2 2 2 2 70.926 71.143 3;4 0.00011874 81269 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.918 59.016 143410000 0 0 0 0 0 13149000 2083600 8713000 11449000 13996000 0 18967000 0 0 75053000 15393 5077 14022 128416;128417;128418;128419;128420;128421;128422;128423;128424;128425;128426;128427 102300;102301;102302;102303;102304;102305 102303 5 EVVIAQNDK Unmodified 1014.5346 0.53457439 614 O94979 SEC31A Protein transport protein Sec31A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 21.493 21.34 2 0.0032698 22288 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 93.162 50.293 393370000 0 121090000 0 18203000 14785000 32314000 20372000 0 15269000 23847000 26818000 35035000 23471000 24490000 37675000 15394 614 14023 128428;128429;128430;128431;128432;128433;128434;128435;128436;128437;128438;128439 102306;102307;102308;102309;102310;102311;102312;102313;102314 102310 8 EVVKPVPITSPAVSK Unmodified 1549.9079 0.9079441 3865 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 56.146 54.557 2;3 4.1636E-06 71545 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.06 103.47 580830000 11937000 219330000 6025900 24162000 20287000 23334000 31758000 22983000 17664000 33748000 33647000 30101000 26737000 27732000 51380000 15395 3865 14024 128440;128441;128442;128443;128444;128445;128446;128447;128448;128449;128450;128451;128452;128453;128454;128455;128456 102315;102316;102317;102318;102319;102320;102321;102322;102323;102324;102325;102326;102327;102328;102329;102330;102331;102332 102321 17 EVVLAEK Unmodified 786.44872 0.4487195 2178 Q10567 AP1B1 AP-1 complex subunit beta-1 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 24.09 24.403 2 0.044016 25981 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 66.993 17.403 115710000 0 0 0 0 0 13673000 12046000 624740 0 12303000 14497000 14004000 10892000 13248000 24420000 15396 2178 14025 128457;128458;128459;128460;128461;128462;128463;128464;128465 102333 102333 1 EVVLYVK Unmodified 848.50076 0.50075507 5280 Q9Y6E2 BZW2 Basic leucine zipper and W2 domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 50.901 51.052 2 0.033465 56749 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 71.949 26.976 426400000 0 0 0 23893000 24735000 38575000 30563000 29817000 30248000 39250000 33180000 45118000 27886000 39549000 63589000 15397 5280 14026 128466;128467;128468;128469;128470;128471;128472;128473;128474;128475;128476;128477 102334;102335;102336;102337 102336 4 EVVNAIIESGK Unmodified 1157.6292 0.62920306 4620 Q9NS86 LANCL2 LanC-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.56 3.86 3 1 5 3 1 1 1 1 1 1 55.838 53.915 2 0.0019204 61461 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 70.1 32.909 271430000 0 251500000 2265000 3866100 4502400 0 3709000 5590000 0 0 0 0 0 0 0 15398 4620 14027 128478;128479;128480;128481;128482;128483;128484;128485;128486 102338;102339;102340;102341;102342;102343;102344;102345 102338 6 EVVPLPQQVLCLK Unmodified 1521.8589 0.85888542 2573 Q15751 HERC1 Probable E3 ubiquitin-protein ligase HERC1 yes yes 0 0 0 By MS/MS 2 0 1 1 92.912 88.002 2 8.0067E-10 109312 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 133.13 107.75 14574000 0 14574000 0 0 0 0 0 0 0 0 0 0 0 0 0 15399 2573 14028 128487 102346 102346 1 EVVQEILQFQEDPQTK Unmodified 1929.9684 0.96837211 399 O60437 PPL Periplakin yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 87.877 82.486 2;3 0.0051037 102262 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 43.764 29.605 111550000 60608000 50941000 0 0 0 0 0 0 0 0 0 0 0 0 0 15400 399 14029 128488;128489;128490 102347;102348 102347 2 EVVQNFAK Unmodified 933.49198 0.4919813 2363 Q14019 COTL1 Coactosin-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.41 1 2 1 13 1 3 1 1 1 1 1 1 1 1 1 2 1 1 36.022 35.936 2 0.0056861 32601 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 128.48 70.925 2881300000 30229000 2435000000 0 10991000 8323600 15462000 16681000 9790000 11251000 18801000 61463000 64137000 14267000 37715000 147160000 15401 2363 14030 128491;128492;128493;128494;128495;128496;128497;128498;128499;128500;128501;128502;128503;128504;128505;128506;128507 102349;102350;102351;102352;102353;102354;102355;102356;102357;102358;102359;102360;102361;102362;102363;102364;102365;102366;102367;102368;102369;102370 102366 21 EVVRTDSLK Unmodified 1045.5768 0.57677356 3627 Q92570 NR4A3 Nuclear receptor subfamily 4 group A member 3 no no 0 0 1 By MS/MS 3 0 1 1 24.089 20.041 2 0.024417 25058 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 101.54 53.693 5189600 0 5189600 0 0 0 0 0 0 0 0 0 0 0 0 0 15402 3627 14031 128508 102371 102371 0 EVVSAQPATFLAR Unmodified 1387.746 0.74596415 1239 P28799 GRN Granulins;Acrogranin;Paragranulin;Granulin-1;Granulin-2;Granulin-3;Granulin-4;Granulin-5;Granulin-6;Granulin-7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 71.223 71.323 2 6.685E-08 81987 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 99.815 80.544 17016000 0 0 0 0 1662900 0 1695100 0 0 0 4340300 6092500 0 3225500 0 15403 1239 14032 128509;128510;128511;128512;128513;128514 102372;102373;102374;102375;102376;102377 102374 6 EVVSHVIK Unmodified 909.52837 0.5283668 1323 P32754 HPD 4-hydroxyphenylpyruvate dioxygenase yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 21.136 21.405 2 0.027721 20700 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.177 30.215 185950000 0 0 0 0 3482500 0 4901100 3142000 0 4526100 41516000 24928000 0 21436000 82017000 15404 1323 14033 128515;128516;128517;128518;128519;128520;128521;128522 102378;102379 102378 2 EVVSRGDDY Unmodified 1038.4618 0.46180338 1631 P50579 METAP2 Methionine aminopeptidase 2 yes yes 0 0 1 By MS/MS 3 0 1 1 23.008 19.046 2 0.034114 23975 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 98.629 94.492 31904000 0 31904000 0 0 0 0 0 0 0 0 0 0 0 0 0 15405 1631 14034 128523 102380 102380 0 EVVTEHLINK Unmodified 1180.6452 0.64518747 2330 Q13618 CUL3 Cullin-3 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 2 1 1 1 1 1 2 39.409 39.608 2;3 0.0036679 42653 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.219 57.438 36789000 0 0 0 0 1532800 9504400 2146900 2409300 0 4732100 0 0 4168800 0 12294000 15406 2330 14035 128524;128525;128526;128527;128528;128529;128530;128531;128532;128533 102381;102382;102383;102384 102383 4 EVVTEIRDK Unmodified 1087.5873 0.58733824 5010 Q9ULX3 NOB1 RNA-binding protein NOB1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 23.472 23.649 2 9.2362E-05 25339 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 138.78 64.81 155790000 0 0 0 10526000 10180000 13774000 10480000 9909500 7703800 19382000 13746000 26171000 0 0 33921000 15407 5010 14036 128534;128535;128536;128537;128538;128539;128540;128541;128542;128543 102385;102386 102386 0 EVVVAESELQK Unmodified 1229.6503 0.65033243 4193 Q9BVM2 DPCD Protein DPCD yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 46.474 45.803 2 0.0020981 50505 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.163 54.026 160570000 0 79005000 0 5843000 5307700 7614800 7590200 0 5089300 9261500 6617100 10560000 6526100 5000100 12151000 15408 4193 14037 128544;128545;128546;128547;128548;128549;128550;128551;128552;128553;128554;128555;128556 102387;102388;102389;102390;102391;102392;102393;102394;102395;102396;102397;102398;102399 102392 13 EVVVTLMK Oxidation (M) 933.5205 0.52050423 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 43.854 43.865 2 0.022619 49286 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 45.081 28.117 89025000 0 0 0 9078100 10438000 9953000 10267000 0 10036000 11813000 17609000 0 0 9831000 0 15409 3023 14038 128557;128558;128559;128560;128561;128562;128563;128564 102400;102401;102402;102403;102404;102405;102406;102407;102408 102400 9 EVVVTLMK Unmodified 917.52559 0.52558961 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 60.425 60.439 2 0.025168 68952 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 58.917 39.281 59231000 0 0 0 2606800 4995800 7622200 4610800 6130100 6767500 8451300 0 11124000 0 6923100 0 15410 3023 14038 128565;128566;128567;128568;128569;128570;128571;128572;128573 102409;102410;102411;102412;102413;102414 102409 6 EVVVYAPLSK Unmodified 1103.6227 0.62266112 4617 Q9NRZ9 HELLS Lymphoid-specific helicase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 62.058 62.153 2 0.003743 71017 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 75.378 32.132 42784000 0 0 0 4034000 4901000 0 5281300 4706200 0 3804500 5820100 7813100 0 2618100 3805300 15411 4617 14039 128574;128575;128576;128577;128578;128579;128580;128581;128582;128583 102415;102416;102417;102418;102419;102420;102421;102422;102423;102424;102425;102426;102427 102420 13 EVVVYLDDNQKPPVGEGLNR Unmodified 2240.1437 0.14371071 1707 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 72.227 72.512 3 0.00041509 82982 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.477 52.769 16239000 0 0 0 0 0 0 0 0 7353200 0 0 0 0 0 8885800 15412 1707 14040 128584;128585 102428 102428 1 EVVVYLDDNQKPPVGEGLNRK Unmodified 2368.2387 0.23867373 1707 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 2 1 1 2 1 1 2 64.801 65.064 3;4 2.8367E-20 74149 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 96.544 84.063 143320000 0 0 0 0 0 12193000 4575700 5342500 13765000 13769000 7781100 21033000 4221400 9014200 51625000 15413 1707 14041 128586;128587;128588;128589;128590;128591;128592;128593;128594;128595;128596;128597;128598 102429;102430;102431;102432;102433;102434;102435;102436;102437;102438;102439 102435 11 EVWDYVFFK Unmodified 1231.5914 0.59136099 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS 2 0 1 1 96.237 88.106 2 0.031045 113800 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.073 45.101 26664000 26664000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15414 4819 14042 128599 102440 102440 1 EVWEETDGLDPNDFDPK Unmodified 2004.8589 0.85888124 1992 P80303 NUCB2 Nucleobindin-2;Nesfatin-1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 83.006 79.009 2 8.6308E-52 98041 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 171.29 166.29 95786000 0 95786000 0 0 0 0 0 0 0 0 0 0 0 0 0 15415 1992 14043 128600;128601 102441;102442 102441 2 EVYAAAAEVLGLILRYVMERK Unmodified 2393.3141 0.31408728 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 2 By MS/MS 1 0 1 1 110.4 115.66 3 7.9987E-08 97179 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 78.794 71.261 19403000 19403000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15416 1986 14044 128602 102443 102443 1 EVYALLYSDK Unmodified 1199.6074 0.60740498 4550 Q9NPF5 DMAP1 DNA methyltransferase 1-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.187 70.263 2 0.0044926 79989 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.643 48.488 91374000 0 0 0 4156700 5122000 8131900 7244700 8015800 8725400 8320200 7173400 12413000 6904400 4651100 10515000 15417 4550 14045 128603;128604;128605;128606;128607;128608;128609;128610;128611;128612;128613;128614 102444;102445;102446;102447;102448;102449;102450;102451;102452;102453;102454;102455 102447 12 EVYDIAFSR Unmodified 1098.5346 0.53457439 1864 P61962 DCAF7 DDB1- and CUL4-associated factor 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.649 66.734 2 0.016625 75625 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.378 46.985 184980000 0 0 0 8295500 8692100 13154000 12198000 11900000 10096000 16420000 18554000 22868000 13987000 16870000 31940000 15418 1864 14046 128615;128616;128617;128618;128619;128620;128621;128622;128623;128624;128625;128626 102456;102457;102458;102459;102460;102461;102462;102463;102464;102465 102458 7 EVYEGEVTELTPCETENPMGGYGK Oxidation (M) 2704.152 0.15202807 5086 Q9Y265 RUVBL1 RuvB-like 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.61 1 1 17 2 2 2 1 2 1 1 2 2 2 2 73.212 73.11 2;3 5.2392E-77 81898 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 134.88 130.92 267090000 0 85320000 0 0 16252000 24934000 3201400 12189000 2246900 6454600 28362000 39500000 0 22350000 26281000 15419 5086 14047 128627;128628;128629;128630;128631;128632;128633;128634;128635;128636;128637;128638;128639;128640;128641;128642;128643;128644;128645 102466;102467;102468;102469;102470;102471;102472;102473;102474;102475;102476;102477 102476 6476 12 EVYEGEVTELTPCETENPMGGYGK Unmodified 2688.1571 0.15711345 5086 Q9Y265 RUVBL1 RuvB-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.19 3.25 3 2 16 1 4 1 1 1 1 2 2 2 2 2 2 78.398 77.334 2;3 7.329E-132 94179 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 144.57 141.3 484140000 14568000 286730000 0 0 6465400 10598000 0 12579000 4873500 22837000 19980000 21249000 8297300 18601000 57357000 15420 5086 14047 128646;128647;128648;128649;128650;128651;128652;128653;128654;128655;128656;128657;128658;128659;128660;128661;128662;128663;128664;128665;128666 102478;102479;102480;102481;102482;102483;102484;102485;102486 102478 8 EVYELLDSPGK Unmodified 1248.6238 0.62378333 1135 P22234 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.9 3.81 6 2 12 3 4 1 1 1 1 1 1 1 1 1 1 1 1 1 65.77 64.155 2 1.479E-06 77472 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 145.72 113.11 6935600000 181510000 5746900000 57362000 32747000 32644000 64969000 43105000 36972000 45335000 65035000 120390000 136550000 47866000 96141000 228070000 15421 1135 14048 128667;128668;128669;128670;128671;128672;128673;128674;128675;128676;128677;128678;128679;128680;128681;128682;128683;128684;128685;128686 102487;102488;102489;102490;102491;102492;102493;102494;102495;102496;102497;102498;102499;102500;102501;102502;102503;102504;102505;102506;102507;102508;102509;102510 102496 23 EVYFAER Unmodified 912.43413 0.43413207 1618 P50238 CRIP1 Cysteine-rich protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 38.271 38.73 2 0.023539 42054 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 101.69 85.584 422450000 0 0 0 0 0 0 0 10397000 0 0 93987000 65082000 8827400 81854000 162310000 15422 1618 14049 128687;128688;128689;128690;128691;128692 102511;102512;102513;102514 102513 4 EVYFAERVTSLGK Unmodified 1497.7827 0.78274359 1618 P50238 CRIP1 Cysteine-rich protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 5 3 1 1 76.336 69.853 2;3 9.4056E-20 90766 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 166.11 141.64 606610000 566760000 27293000 12555000 0 0 0 0 0 0 0 0 0 0 0 0 15423 1618 14050 128693;128694;128695;128696;128697 102515;102516;102517 102517 2 EVYLDLVK Unmodified 977.54335 0.54334816 531 O75674 TOM1L1 TOM1-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 7 3.69 1 1 3 2 1 1 1 74.362 72.853 2 0.012096 91105 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.45 45.664 40293000 0 24475000 0 0 0 0 4017100 0 0 0 0 0 0 5265900 6535100 15424 531 14051 128698;128699;128700;128701;128702 102518;102519;102520 102519 3 EVYMTPLR Unmodified 1007.511 0.51100218 4079 Q9BPX3 NCAPG Condensin complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 53.332 53.574 2 0.046931 60792 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 73.975 52.228 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15425 4079 14052 128703;128704 102521;102522 102521 2 EVYMTPLR Oxidation (M) 1023.5059 0.5059168 4079 Q9BPX3 NCAPG Condensin complex subunit 3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 39.985 40.236 2 0.021491 43528 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.205 32.677 94079000 0 0 0 6415900 0 12137000 6649000 5365700 0 10326000 10734000 15427000 8829900 5423100 12772000 15426 4079 14052 128705;128706;128707;128708;128709;128710;128711;128712;128713;128714 102523;102524;102525 102523 3 EVYQAFNPK Unmodified 1094.5397 0.53965977 4239 Q9BY41 HDAC8 Histone deacetylase 8 yes yes 0 0 0 By MS/MS 2 0 1 1 48.447 42.799 2 0.0079039 55740 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.626 76.957 42608000 0 42608000 0 0 0 0 0 0 0 0 0 0 0 0 0 15427 4239 14053 128715 102526 102526 1 EVYQPGSVLDFPR Unmodified 1505.7514 0.75144346 1382 P36915 GNL1 Guanine nucleotide-binding protein-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 80.569 80.646 2 0.00078701 93179 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 79.201 66.245 49824000 0 0 0 0 1821300 6996400 0 0 0 7152300 5697900 5992200 4306800 4086300 13770000 15428 1382 14054 128716;128717;128718;128719;128720;128721;128722;128723 102527;102528;102529;102530;102531;102532;102533;102534;102535 102527 9 EVYQQQQYGSGGR Unmodified 1498.6801 0.68006943 4056 Q99729 HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.367 22.572 2 4.6888E-90 22682 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 201.75 180.06 137240000 0 0 0 3551100 3683300 5155000 6658500 7513900 5438800 7023800 22897000 24770000 7804400 15956000 26786000 15429 4056 14055 128724;128725;128726;128727;128728;128729;128730;128731;128732;128733;128734;128735 102536;102537;102538;102539;102540;102541;102542;102543;102544;102545;102546;102547 102539 12 EVYQQQQYGSGGRGNR Unmodified 1825.8456 0.84557163 4056 Q99729 HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 17.16 17.466 3 1.6154E-06 16684 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 82.908 74.566 29876000 0 0 0 0 0 0 2557300 0 1423400 2138300 5432700 5126400 2494900 3626000 7076700 15430 4056 14056 128736;128737;128738;128739;128740;128741;128742;128743 102548;102549;102550;102551;102552;102553;102554 102551 7 EVYRQQQQQQK Unmodified 1461.7324 0.73243935 236 O14979 HNRNPDL Heterogeneous nuclear ribonucleoprotein D-like yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 6 2 2 2 7.0498 4.0579 2;3 6.2099E-116 6148 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 249.03 212.47 353990000 131460000 105990000 116540000 0 0 0 0 0 0 0 0 0 0 0 0 15431 236 14057 128744;128745;128746;128747;128748;128749 102555;102556;102557;102558 102558 4 EWAAQYR Unmodified 922.42972 0.42971539 5031 Q9UNF1 MAGED2 Melanoma-associated antigen D2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.722 33.906 2 0.020934 37308 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 107.55 90.625 269480000 0 0 0 10860000 17945000 20600000 14282000 16807000 11080000 28267000 30340000 35808000 22533000 20199000 40757000 15432 5031 14058 128750;128751;128752;128753;128754;128755;128756;128757;128758;128759;128760;128761 102559;102560 102559 2 EWAAQYREAMEADLK Unmodified 1809.8356 0.83558379 5031 Q9UNF1 MAGED2 Melanoma-associated antigen D2 yes yes 0 0 1 By MS/MS 2 0 1 1 79.428 71.297 3 0.00030278 93574 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.358 66.952 40516000 40516000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15433 5031 14059 128762 102561 102561 1 EWAFEESK Unmodified 1024.4502 0.45017606 4607 Q9NRN7 AASDHPPT L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 54.385 50.969 2 0.0025317 65467 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.62 95.204 88608000 0 83053000 2167100 0 3388200 0 0 0 0 0 0 0 0 0 0 15434 4607 14060 128763;128764;128765 102562;102563;102564;102565 102562 4 EWAHATIIPK Unmodified 1164.6291 0.62914348 1271 P30153 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8 3.46 3 9 2 1 1 1 1 1 1 1 1 1 1 54.663 53.198 2;3 1.1898E-05 68537 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 152.34 100.49 1540100000 1412100000 0 38193000 0 0 9811100 2556600 2432200 0 9238600 8871300 12263000 6491600 9009200 29157000 15435 1271 14061 128766;128767;128768;128769;128770;128771;128772;128773;128774;128775;128776;128777 102566;102567;102568;102569;102570;102571;102572;102573;102574 102571 6 EWDEFLAK Unmodified 1036.4866 0.48656157 2234 Q13111 CHAF1A Chromatin assembly factor 1 subunit A yes yes 0 0 0 By MS/MS 2 0 1 1 77.485 72.71 2 0.030353 90655 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.972 44.743 38687000 0 38687000 0 0 0 0 0 0 0 0 0 0 0 0 0 15436 2234 14062 128778 102575 102575 1 EWDLLNENIMLLSK Unmodified 1716.8757 0.87565769 130 O00232 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 0 0 0 By MS/MS 2 0 1 1 98.827 90.697 2 0.00082443 116999 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 103.21 88.534 10413000 10413000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15437 130 14063 128779 102576 102576 1 EWDSEASCPK Unmodified 1207.4816 0.48155254 4574 Q9NQS1 AVEN Cell death regulator Aven yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 26.098 26.26 2 0.017731 26859 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.794 39.931 38040000 0 0 0 4596400 5001600 3375900 4981200 2796400 0 4624900 0 6787500 2265800 0 3610000 15438 4574 14064 128780;128781;128782;128783;128784;128785;128786;128787;128788 102577;102578;102579 102578 3 EWEEAMAK Unmodified 992.42733 0.42733213 3573 Q8WWI1 LMO7 LIM domain only protein 7 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 36.117 35.919 2 0.021946 39785 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 61.561 55.059 105980000 0 30637000 0 1509000 0 5477600 4895800 4636300 2874500 9872700 8612800 9865500 6664500 7973500 12956000 15439 3573 14065 128789;128790;128791;128792;128793;128794;128795;128796;128797;128798;128799;128800 102580;102581;102582;102583;102584;102585;102586 102584 7 EWESSCFVEK Unmodified 1299.5442 0.5441528 2460 Q14997 PSME4 Proteasome activator complex subunit 4 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 57.351 52.01 2 0.041097 66709 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 54.608 40.838 59612000 0 59612000 0 0 0 0 0 0 0 0 0 0 0 0 0 15440 2460 14066 128801;128802 102587 102587 1 EWFLQAAK Unmodified 991.51272 0.51271674 829 P06744 GPI Glucose-6-phosphate isomerase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 6 4 2 2 1 1 1 1 74.298 72.556 2 0.011473 81954 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.847 26.822 2491200000 0 1595700000 597130000 0 0 0 0 0 0 0 0 0 0 45992000 252460000 15441 829 14067 128803;128804;128805;128806 102588;102589;102590 102589 3 EWGDDEEEQPSK Unmodified 1447.5739 0.5739326 2475 Q15020 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26.849 26.312 2 2.4137E-05 28716 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 112.36 107.42 115250000 5705000 9905100 0 5951700 3378800 6780700 5409700 5783700 5061300 8305400 9532900 14368000 13157000 7770100 14138000 15442 2475 14068 128807;128808;128809;128810;128811;128812;128813;128814;128815;128816;128817;128818;128819;128820 102591;102592;102593;102594;102595;102596;102597;102598;102599;102600 102591 10 EWGSGSDTLR Unmodified 1106.4993 0.49925152 1041 P16615 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 37.236 37.222 2 0.016128 41539 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 49.715 40.127 19465000 0 0 0 2561700 2909500 0 2361200 4088300 0 2640100 4904300 0 0 0 0 15443 1041 14069 128821;128822;128823;128824;128825;128826 102601 102601 1 EWIPRPPEK Unmodified 1150.6135 0.61349341 1471 P43034 PAFAH1B1 Platelet-activating factor acetylhydrolase IB subunit alpha yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 56.874 50.106 2;3 0.0033373 69228 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 141.48 112.33 73950000 55782000 0 18168000 0 0 0 0 0 0 0 0 0 0 0 0 15444 1471 14070 128827;128828;128829 102602;102603 102602 2 EWLEGEDLSEELK Unmodified 1575.7304 0.73043325 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 0 By MS/MS By MS/MS By matching 6.25 3.77 1 1 2 2 1 1 81.365 79.426 2 0.0008304 92358 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 69.672 63.806 45568000 0 37365000 0 0 0 3782500 0 0 0 0 0 0 0 0 4420900 15445 2361 14071 128830;128831;128832;128833 102604;102605 102604 2 EWLNSCDLK Unmodified 1163.5281 0.5281088 5231 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 59.638 57.587 2 0.0093588 64664 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.713 72.817 85981000 0 53550000 1343600 9517400 6904200 0 0 0 0 0 0 0 0 0 14665000 15446 5231 14072 128834;128835;128836;128837;128838;128839 102606;102607;102608;102609 102607 4 EWLSPLPDR Unmodified 1111.5662 0.56620887 3993 Q96ST2 IWS1 Protein IWS1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.868 73.934 2 0.0034222 84469 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.114 83.241 266840000 0 0 0 9569300 12890000 22251000 12626000 14502000 13840000 26321000 29593000 31789000 30993000 24057000 38412000 15447 3993 14073 128840;128841;128842;128843;128844;128845;128846;128847;128848;128849;128850;128851 102610;102611;102612;102613;102614;102615;102616;102617;102618;102619;102620;102621 102613 12 EWMPVTK Oxidation (M) 905.43169 0.43168922 1027 P15880 RPS2 40S ribosomal protein S2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 1 2 2 2 2 2 31.381 31.571 2 0.025786 34426 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 69.176 37.872 308690000 0 0 0 18336000 30665000 22961000 19219000 15555000 20166000 11378000 30484000 49735000 30813000 30453000 28925000 15448 1027 14074 128852;128853;128854;128855;128856;128857;128858;128859;128860;128861;128862;128863;128864;128865;128866;128867;128868;128869;128870;128871;128872;128873;128874 102622;102623;102624;102625 102622 4 EWNGVVSESDSPVK Unmodified 1531.7155 0.71545188 1081 P18858 LIG1 DNA ligase 1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS 7 3.69 1 1 3 2 1 1 1 59.715 57.741 2 1.0677E-30 72695 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 179.19 146.78 178220000 0 146840000 0 0 0 7583300 0 0 5452300 0 0 0 0 0 18350000 15449 1081 14075 128875;128876;128877;128878;128879 102626;102627;102628;102629;102630 102626 5 EWPSNLDLRK Unmodified 1256.6513 0.65133548 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 61.593 59.319 3 0.0097479 66895 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 42.718 35.986 33599000 10621000 0 5513500 0 0 3111900 6060800 0 0 0 0 8291400 0 0 0 15450 1300 14076 128880;128881;128882;128883;128884;128885 102631;102632;102633;102634;102635 102631 5 EWQELDDAEK Unmodified 1261.5463 0.54626129 2252 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 46.746 45.645 2 0.0027746 50664 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 80.231 66.652 918940000 18443000 526730000 0 21242000 28035000 29194000 11095000 11728000 12555000 46425000 61408000 79367000 18466000 16127000 38130000 15451 2252 14077 128886;128887;128888;128889;128890;128891;128892;128893;128894;128895;128896;128897;128898;128899;128900 102636;102637;102638;102639;102640;102641;102642;102643;102644;102645;102646;102647;102648;102649;102650 102646 14 EWSGLLEELAR Unmodified 1301.6616 0.66156582 2064 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 90.166 90.265 2 0.0079576 104515 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.725 39.348 8019900 0 0 0 0 0 998650 0 0 0 1265000 0 0 0 0 5756200 15452 2064 14078 128901;128902;128903 102651 102651 1 EWSGLLEELARNGQIDK Unmodified 1956.9905 0.99050453 2064 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type yes yes 0 0 1 By MS/MS 2 0 1 1 95.147 87.017 3 0.00042052 112430 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.275 54.992 22299000 22299000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15453 2064 14079 128904 102652 102652 1 EWSQHINGASHSR Unmodified 1507.6916 0.69163717 1473 P43243 MATR3 Matrin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 1 2 1 2 1 1 1 2 2 1 2 18.491 18.716 2;3 0.0015475 17543 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.088 44.809 262910000 0 0 0 5079100 4054200 22417000 10675000 21025000 21024000 22086000 21319000 39756000 32211000 14794000 48467000 15454 1473 14080 128905;128906;128907;128908;128909;128910;128911;128912;128913;128914;128915;128916;128917;128918;128919;128920;128921 102653;102654;102655;102656;102657;102658;102659;102660;102661;102662;102663;102664;102665 102656 12 EWTPCGPHQGQDEGRGPAPGSGTR Unmodified 2533.1153 0.1152809 2968 Q6SPF0 SAMD1 Atherin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 34.833 34.978 4 1.0072E-06 37717 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 50.055 47.173 121210000 0 0 0 5417500 2958400 0 6959800 6816200 21545000 12120000 14541000 17348000 19995000 13512000 0 15455 2968 14081 128922;128923;128924;128925;128926;128927;128928;128929;128930;128931 102666;102667;102668;102669;102670;102671;102672;102673;102674;102675;102676 102669 11 EWVESMGGK Unmodified 1021.4539 0.45388123 1625 P50502;Q8NFI4 ST13;ST13P5 Hsc70-interacting protein;Putative protein FAM10A5 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 40.883 41.182 2 0.0081255 46756 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 70.525 40.718 107620000 0 0 0 3387200 0 0 0 5580600 0 10573000 17281000 11923000 7326900 13240000 38308000 15456 1625 14082 128932;128933;128934;128935;128936;128937;128938;128939 102677;102678;102679;102680;102681;102682;102683;102684 102684 8 EYAEDDNIYQQK Unmodified 1514.6525 0.65251728 3840 Q96FW1 OTUB1 Ubiquitin thioesterase OTUB1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.34 1 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 41.305 41.028 2 1.9972E-09 46124 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 120.99 116.05 204530000 35177000 20733000 0 6264900 4005700 23978000 5768600 7710800 4362200 10882000 14883000 17863000 8298300 12626000 31976000 15457 3840 14083 128940;128941;128942;128943;128944;128945;128946;128947;128948;128949;128950;128951;128952;128953;128954 102685;102686;102687;102688;102689;102690;102691;102692;102693;102694;102695 102690 5 EYAEIIRK Unmodified 1020.5604 0.56039521 3028 Q712K3 UBE2R2 Ubiquitin-conjugating enzyme E2 R2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.179 31.368 2 0.0067566 33524 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 133.79 57.657 200900000 0 0 0 9147600 10104000 15312000 12586000 11748000 7025000 22124000 19421000 30539000 16645000 17740000 28513000 15458 3028 14084 128955;128956;128957;128958;128959;128960;128961;128962;128963;128964;128965;128966 102696;102697 102697 0 EYAENIGDGRSPEFRENEQK Unmodified 2367.0727 0.072730611 3600 Q8WYA6 CTNNBL1 Beta-catenin-like protein 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS 7.09 3.85 4 7 2 2 1 1 1 1 1 1 1 43.01 41.13 3;4 2.7508E-11 45037 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.203 57.934 151020000 29597000 0 41818000 0 0 9075400 5762400 0 0 7493900 0 10484000 7992000 11284000 27515000 15459 3600 14085 128967;128968;128969;128970;128971;128972;128973;128974;128975;128976;128977 102698;102699;102700;102701;102702;102703;102704 102699 7 EYAQNIWNVEPSDLK Unmodified 1804.8632 0.86317875 828 P06737 PYGL Glycogen phosphorylase, liver form yes yes 0 0 0 By MS/MS 2 0 1 1 84.098 79.378 2 1.4025E-41 98673 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 190.53 165.74 80014000 0 80014000 0 0 0 0 0 0 0 0 0 0 0 0 0 15460 828 14086 128978 102705 102705 1 EYAQVFR Unmodified 911.45012 0.45011648 1340;1200 P35221;P26232 CTNNA1;CTNNA2 Catenin alpha-1;Catenin alpha-2 no no 0 0 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 41.209 41.392 2 0.023833 45932 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 84.025 66.258 205680000 0 0 0 11540000 13321000 17059000 14399000 16003000 0 21554000 20196000 26074000 19836000 13611000 32081000 15461 1340;1200 14087 128979;128980;128981;128982;128983;128984;128985;128986;128987;128988;128989 102706;102707;102708;102709;102710;102711;102712 102706 6 EYAQVFREHANK Unmodified 1490.7266 0.72662569 1340;1200 P35221;P26232 CTNNA1;CTNNA2 Catenin alpha-1;Catenin alpha-2 no no 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 32.064 31.47 3 0.008298 46272 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.164 45.106 76624000 26103000 0 0 0 2344800 6043600 7274700 0 7368100 7421100 0 0 5271500 6455800 8342200 15462 1340;1200 14088 128990;128991;128992;128993;128994;128995;128996;128997;128998 102713;102714;102715;102716;102717;102718 102716 6 EYASEGEPLFAGGSAIPK Unmodified 1821.8785 0.87849447 5073 Q9UQR0 SCML2 Sex comb on midleg-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 2 2 1 1 77.733 77.13 2 5.9612E-33 87875 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 122.39 93.434 224560000 0 166670000 0 1920500 0 8555400 3764200 3231200 4838600 5480000 4276900 0 3315700 6734500 15773000 15463 5073 14089 128999;129000;129001;129002;129003;129004;129005;129006;129007;129008;129009;129010;129011;129012 102719;102720;102721;102722;102723 102722 5 EYASTLQNLCNQVDK Unmodified 1781.8254 0.82541304 1040 P16591 FER Tyrosine-protein kinase Fer yes yes 0 0 0 By MS/MS 2 0 1 1 74.235 69.079 2 1.4216E-06 86745 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.17 89.172 31003000 0 31003000 0 0 0 0 0 0 0 0 0 0 0 0 0 15464 1040 14090 129013 102724 102724 1 EYATEVDVDFVRK Unmodified 1569.7675 0.76748745 2178;1937 P63010;Q10567 AP2B1;AP1B1 AP-2 complex subunit beta;AP-1 complex subunit beta-1 no no 0 0 1 By MS/MS 2 0 2 2 73.148 64.952 2;3 0.00066473 86009 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.543 72.491 40658000 40658000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15465 1937;2178 14091 129014;129015 102725;102726 102725 2 EYAVNEVVAGIK Unmodified 1290.682 0.68196691 2472;4860 Q9UBU8;Q15014 MORF4L1;MORF4L2 Mortality factor 4-like protein 1;Mortality factor 4-like protein 2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.1 3.91 4 1 5 1 2 2 1 1 1 1 1 74.021 71.829 2 4.8765E-08 82674 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 121.73 102.95 802340000 11353000 698370000 8703800 0 12915000 0 0 16550000 0 0 19967000 0 7640100 0 26840000 15466 4860;2472 14092 129016;129017;129018;129019;129020;129021;129022;129023;129024;129025 102727;102728;102729;102730;102731;102732;102733;102734;102735;102736 102729 9 EYCISSDDLFSLPYCPGK Unmodified 2149.9336 0.93364286 2641 Q16881 TXNRD1 Thioredoxin reductase 1, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 1 3 2 92.849 88.497 2;3 1.3973E-58 110342 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 203.39 197.14 1297000000 26758000 1253800000 16492000 0 0 0 0 0 0 0 0 0 0 0 0 15467 2641 14093 129026;129027;129028;129029;129030;129031 102737;102738;102739;102740;102741;102742 102737 6 EYDELAETQGK Unmodified 1281.5725 0.57247604 397 O60341 KDM1A Lysine-specific histone demethylase 1A yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 33.872 33.201 2 5.6552E-18 35860 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 175.91 139.73 365000000 6203600 12608000 0 0 15670000 28548000 19171000 27052000 26182000 35729000 36562000 46150000 37530000 30826000 42769000 15468 397 14094 129032;129033;129034;129035;129036;129037;129038;129039;129040;129041;129042;129043;129044 102743;102744;102745;102746;102747;102748;102749;102750;102751;102752 102750 5 EYDELAETQGKLEEK Unmodified 1780.8367 0.83668923 397 O60341 KDM1A Lysine-specific histone demethylase 1A yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 50.664 50.43 3 0.00077929 57524 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 44.807 39.092 41201000 0 0 0 5164900 9009200 0 16811000 10216000 0 0 0 0 0 0 0 15469 397 14095 129045;129046;129047;129048 102753;102754;102755;102756 102755 4 EYDLIVHQLATYPDVNNSIK Unmodified 2331.1747 0.17467649 498 O75436 VPS26A Vacuolar protein sorting-associated protein 26A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.8 3.12 3 1 1 1 2 1 1 86.887 83.195 3 5.3717E-92 104375 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 163.53 154.67 210400000 21469000 144770000 24752000 0 0 0 0 0 0 0 0 0 0 0 19408000 15470 498 14096 129049;129050;129051;129052;129053 102757;102758;102759;102760;102761;102762 102758 6 EYDQALADLK Unmodified 1164.5663 0.56626845 2162 Q08752 PPID Peptidyl-prolyl cis-trans isomerase D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 58.493 57.524 2 0.010238 64849 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.305 46.927 91291000 13314000 0 0 0 0 7962700 6488200 0 0 17688000 13804000 0 0 8304600 23729000 15471 2162 14097 129054;129055;129056;129057;129058;129059;129060 102763;102764;102765;102766;102767;102768;102769 102766 7 EYDRLLEEHAK Unmodified 1401.6888 0.6888432 1660 P51572 BCAP31 B-cell receptor-associated protein 31 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37.358 36.46 3 0.0053365 38928 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 52.788 46.787 290960000 16688000 8729200 7695200 12206000 9037800 15958000 17152000 21660000 21892000 18074000 23993000 35670000 25185000 26601000 30422000 15472 1660 14098 129061;129062;129063;129064;129065;129066;129067;129068;129069;129070;129071;129072;129073;129074;129075 102770;102771;102772;102773 102772 3 EYDVAVQAIK Unmodified 1134.5921 0.59208927 3326 Q8N3U4 STAG2 Cohesin subunit SA-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 55.115 55.319 2 0.001865 61777 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 96.492 74.361 88331000 0 0 0 0 3394200 8201600 5118100 4586600 3086600 10035000 10333000 10334000 7031600 8679900 17531000 15473 3326 14099 129076;129077;129078;129079;129080;129081;129082;129083;129084;129085;129086 102774;102775;102776;102777;102778;102779;102780;102781;102782;102783;102784 102781 11 EYEAQQQYR Unmodified 1213.5364 0.53636531 4653 Q9NUQ8 ABCF3 ATP-binding cassette sub-family F member 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.102 18.29 2 3.8527E-09 18611 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 163.34 150.29 120550000 0 0 0 7657300 7218100 9908300 9273900 8911900 5702400 14522000 10591000 13121000 9986900 9944400 13715000 15474 4653 14100 129087;129088;129089;129090;129091;129092;129093;129094;129095;129096;129097;129098 102785;102786;102787;102788;102789;102790;102791;102792;102793;102794;102795;102796;102797 102786 13 EYEEEERK Unmodified 1110.4829 0.48293275 2612 Q16543 CDC37 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.33 0.471 2 1 1 1 1 6.806 3.8033 2 0.018567 5242 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 144.38 67.093 65297000 41833000 19937000 3526500 0 0 0 0 0 0 0 0 0 0 0 0 15475 2612 14101 129099;129100;129101 102798;102799 102798 2 EYEEEERKK Unmodified 1238.5779 0.57789577 2612 Q16543 CDC37 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed yes yes 0 0 2 By matching By MS/MS By MS/MS 2 0 3 1 1 1 5.9185 2.9593 3 0.023692 5083 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 94.85 71.932 480830000 98424000 57927000 324470000 0 0 0 0 0 0 0 0 0 0 0 0 15476 2612 14102 129102;129103;129104 102800;102801 102801 1 EYEEIMRDYIQK Unmodified 1615.7552 0.75520821 1053 P17480 UBTF Nucleolar transcription factor 1 yes yes 0 0 1 By MS/MS 2 0 1 1 74.818 69.663 3 0.028864 87505 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 42.095 33.275 15950000 0 15950000 0 0 0 0 0 0 0 0 0 0 0 0 0 15477 1053 14103 129105 102802 102802 1 EYEELLASVR Unmodified 1207.6085 0.60846762 3566 Q8WVV4 POF1B Protein POF1B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching 10 0 5 1 1 1 1 1 73.209 73.133 2 0.00092357 84817 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 134.05 124.02 62603000 0 0 0 32592000 3095900 0 3824700 17660000 0 0 5430100 0 0 0 0 15478 3566 14104 129106;129107;129108;129109;129110 102803;102804;102805;102806;102807 102806 5 EYELLSDELNQK Unmodified 1479.7093 0.70930387 1328 P33176 KIF5B Kinesin-1 heavy chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 73.021 71.621 2;3 4.5735E-81 82751 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 199.46 167.7 945320000 24757000 593230000 5512200 17554000 17931000 30096000 21834000 20581000 14423000 26914000 33250000 33738000 24050000 24458000 56995000 15479 1328 14105 129111;129112;129113;129114;129115;129116;129117;129118;129119;129120;129121;129122;129123;129124;129125;129126;129127 102808;102809;102810;102811;102812;102813;102814;102815;102816;102817;102818;102819;102820;102821;102822;102823;102824 102818 14 EYENELAK Unmodified 994.46074 0.46074075 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 23.471 23.552 2 0.011813 24614 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 114.78 90.628 160030000 0 0 0 41441000 19307000 0 0 60198000 0 0 0 39079000 0 0 0 15480 1029 14106 129128;129129;129130;129131 102825;102826;102827;102828 102825 1 EYENIIALQENELK Unmodified 1704.857 0.85703074 1992 P80303 NUCB2 Nucleobindin-2;Nesfatin-1 yes yes 0 0 0 By MS/MS By MS/MS By matching 7.33 3.77 1 2 1 1 1 80.907 79.425 2 1.0189E-38 97994 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 197.07 132.42 212120000 0 196840000 0 0 0 0 0 0 0 0 0 11082000 0 4200700 0 15481 1992 14107 129132;129133;129134 102829;102830 102829 2 EYERFSK Unmodified 957.4556 0.45559579 2347;118 O00148;Q13838 DDX39A;DDX39B ATP-dependent RNA helicase DDX39A;Spliceosome RNA helicase DDX39B no no 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 16.456 13.147 2 0.034477 17368 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 155.82 80.506 595320000 328660000 55022000 211630000 0 0 0 0 0 0 0 0 0 0 0 0 15482 118;2347 14108 129135;129136;129137 102831 102831 0 EYEVGDPGQR Unmodified 1148.5098 0.5098162 183 O14497 ARID1A AT-rich interactive domain-containing protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 25.814 26.041 2 0.04409 27898 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 38.776 27.365 41284000 0 0 0 0 1653800 6233900 4362400 3186600 3557100 5214300 4360300 2898900 0 4576200 5240800 15483 183 14109 129138;129139;129140;129141;129142;129143;129144;129145;129146;129147 102832 102832 1 EYFSTFGEVLMVQVK Unmodified 1775.8804 0.88040872 2242 Q13148 TARDBP TAR DNA-binding protein 43 yes yes 0 0 0 By MS/MS 3 0 1 1 96.797 93.292 2 0.0099934 96555 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 73.885 64.778 1996800 1996800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15484 2242 14110 129148 102833 102833 1 EYFSWEGAFQHVGK Unmodified 1683.7682 0.76815616 1211 P26641 EEF1G Elongation factor 1-gamma yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 81.37 81.505 3 0.00023045 93967 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.224 60.007 32015000 0 0 0 0 0 4361700 0 0 2266900 0 0 0 0 0 25387000 15485 1211 14111 129149;129150;129151 102834;102835 102835 2 EYGAGSSRDWAAK Unmodified 1396.6371 0.63714198 1126 P21399 ACO1 Cytoplasmic aconitate hydratase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 32.923 28.22 3 0.0030802 35756 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 64.534 51.526 93586000 18094000 33307000 42185000 0 0 0 0 0 0 0 0 0 0 0 0 15486 1126 14112 129152;129153;129154 102836 102836 1 EYGEQIDPSTHRK Unmodified 1558.7376 0.73758431 5095 Q9Y2B0 CNPY2 Protein canopy homolog 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.57 3.06 5 23 2 1 2 2 2 1 2 2 2 2 2 2 2 2 2 22.073 21.501 3;4 0.0023487 27378 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 62.891 57.812 802880000 101840000 30062000 433410000 5647200 6715200 3160800 12379000 8074600 11253000 7681400 31233000 52956000 7404200 35265000 55802000 15487 5095 14113 129155;129156;129157;129158;129159;129160;129161;129162;129163;129164;129165;129166;129167;129168;129169;129170;129171;129172;129173;129174;129175;129176;129177;129178;129179;129180;129181;129182 102837;102838;102839;102840;102841;102842;102843;102844;102845;102846;102847;102848;102849;102850 102844 12 EYGGLDVLVNNAGIAFK Unmodified 1778.9203 0.9202997 1033 P16152 CBR1 Carbonyl reductase [NADPH] 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.29 2.76 5 1 1 1 3 2 1 94.665 90.97 2;3 5.4265E-75 113220 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 231.7 216.16 471570000 16298000 444960000 8709900 0 0 0 0 0 0 0 0 0 0 0 1602800 15488 1033 14114 129183;129184;129185;129186;129187;129188;129189 102851;102852;102853;102854;102855;102856;102857;102858;102859 102851 8 EYGIALPCLLDADK Unmodified 1576.7807 0.78069468 5226 Q9Y5A7 NUB1 NEDD8 ultimate buster 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 93.382 89.692 2 0.0014825 111292 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.685 49.814 88088000 0 86527000 1561000 0 0 0 0 0 0 0 0 0 0 0 0 15489 5226 14115 129190;129191 102860;102861 102860 2 EYGMIYLGK Oxidation (M) 1088.5212 0.52123251 3039 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 53.098 53.163 2 0.0076033 58865 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.659 41.131 92445000 0 0 0 5115500 0 24792000 10844000 0 0 22981000 0 0 0 0 28712000 15490 3039 14116 129192;129193;129194;129195;129196;129197 102862;102863;102864;102865;102866;102867;102868 102866 4647 7 EYGMIYLGK Unmodified 1072.5263 0.52631789 3039 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 69.267 69.315 2 0.011542 79731 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 62.659 43.096 71030000 0 0 0 1620900 2408600 8745400 2557500 3879300 2791700 6335800 8426200 0 4118100 6071600 24075000 15491 3039 14116 129198;129199;129200;129201;129202;129203;129204;129205;129206;129207;129208 102869;102870;102871 102869 3 EYHRLQSK Unmodified 1059.5461 0.54614213 737 P00966 ASS1 Argininosuccinate synthase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 6.5098 3.5456 2 2.1831E-12 6663 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 199.7 73.89 2033600000 1905700000 89201000 38709000 0 0 0 0 0 0 0 0 0 0 0 0 15492 737 14117 129209;129210;129211 102872;102873;102874;102875 102873 4 EYHRSVAGK Unmodified 1045.5305 0.53049207 1655 P51531 SMARCA2 Probable global transcription activator SNF2L2 yes yes 0 0 1 By MS/MS 2 0 1 1 6.2347 2.8025 2 3.9348E-06 5758 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 179.28 135.51 56931000 56931000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15493 1655 14118 129212 102876 102876 1 EYIDEEGVR Unmodified 1108.5037 0.50366819 4325 Q9H0E3 SAP130 Histone deacetylase complex subunit SAP130 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.483 35.666 2 0.0059097 38158 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.478 55.778 104980000 0 0 0 5873600 6267300 6559200 9144100 8020200 5417400 7109500 11070000 9579200 15344000 11227000 9369100 15494 4325 14119 129213;129214;129215;129216;129217;129218;129219;129220;129221;129222;129223;129224 102877;102878;102879;102880;102881;102882;102883;102884;102885 102879 9 EYIEHCNTPTTDSDSSIAVK Unmodified 2266.006 0.0059561785 4680 Q9NVR5 DNAAF2 Protein kintoun yes yes 0 0 0 By matching By MS/MS 2.33 0.471 2 1 1 2 50.231 44.045 3 2.1266E-05 57546 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.966 57.256 52871000 3094500 49776000 0 0 0 0 0 0 0 0 0 0 0 0 0 15495 4680 14120 129225;129226;129227 102886;102887 102886 2 EYIKQRGAEK Unmodified 1220.6513 0.65133548 5201 Q9Y4G6 TLN2 Talin-2 yes yes 0 0 2 By MS/MS 2 0 1 1 35.859 32.475 2 0.023463 40979 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 111.82 42.901 5247200 0 0 5247200 0 0 0 0 0 0 0 0 0 0 0 0 15496 5201 14121 129228 102888 102888 1 EYINECDSDYHEER Unmodified 1857.7112 0.71117114 3701 Q93008 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 31.696 32.146 3 0.00035344 35060 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 67.115 66.411 40640000 0 0 0 0 0 0 0 0 0 5762100 4062000 10439000 5655300 6531800 8190700 15497 3701 14122 129229;129230;129231;129232;129233;129234 102889;102890;102891;102892;102893;102894 102893 6 EYIPGQPPLSQSSDSSPTR Unmodified 2044.9702 0.97016302 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.484 59.593 2 1.3989E-05 67570 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 87.498 70.131 298680000 0 0 0 12953000 12588000 21883000 18461000 16054000 14488000 29733000 32478000 40589000 22378000 28249000 48830000 15498 848 14123 129235;129236;129237;129238;129239;129240;129241;129242;129243;129244;129245;129246 102895;102896;102897;102898;102899;102900;102901;102902;102903;102904;102905;102906 102904 12 EYIPGQPPLSQSSDSSPTRNSEPAGLETPEAK Unmodified 3368.6008 0.60082264 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 73.987 68.908 3 8.7954E-21 87247 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.002 70.895 404350000 35093000 356410000 12855000 0 0 0 0 0 0 0 0 0 0 0 0 15499 848 14124 129247;129248;129249;129250 102907;102908;102909;102910 102907 4 EYIPTVFDNYSAQSAVDGR Unmodified 2130.9858 0.98581308 2014 P84095 RHOG Rho-related GTP-binding protein RhoG yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 2 82.227 82.385 2;3 6.2437E-31 95332 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 107.61 94.628 28711000 0 0 0 0 0 0 0 0 0 0 5707400 0 1711400 4628100 16664000 15500 2014 14125 129251;129252;129253;129254;129255 102911;102912;102913 102912 3 EYIQILER Unmodified 1062.571 0.5709599 1707 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 67.801 67.893 2 0.025292 77891 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 58.815 14.42 103740000 0 0 0 4810200 5070400 0 7268800 7055400 5975700 12704000 10849000 13925000 12447000 8388700 15249000 15501 1707 14126 129256;129257;129258;129259;129260;129261;129262;129263;129264;129265;129266 102914;102915;102916;102917 102916 4 EYLALQK Unmodified 863.47527 0.4752686 2684 Q4G0J3 LARP7 La-related protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42.033 41.071 2 0.024701 45677 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 82.263 20.265 289340000 4654400 180650000 1714000 6774300 8394300 6332700 7458600 6910100 7467900 8446200 7944500 9035500 10351000 8374900 14834000 15502 2684 14127 129267;129268;129269;129270;129271;129272;129273;129274;129275;129276;129277;129278;129279;129280;129281 102918;102919;102920;102921 102921 4 EYLELEK Unmodified 922.46476 0.46476349 615 O94992 HEXIM1 Protein HEXIM1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 46.662 46.772 2 0.04445 52331 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 66.799 8.1948 106000000 0 0 0 7734400 7833400 8551100 6252600 7204400 0 11769000 13185000 13833000 17501000 12131000 0 15503 615 14128 129282;129283;129284;129285;129286;129287;129288;129289;129290;129291 102922;102923 102922 2 EYLERVDGEK Unmodified 1236.5986 0.59863121 2328 Q13616 CUL1 Cullin-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 3 1 33.24 28.593 2;3 0.0079964 37835 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.81 83.518 155680000 14856000 134580000 6245700 0 0 0 0 0 0 0 0 0 0 0 0 15504 2328 14129 129292;129293;129294;129295;129296 102924;102925;102926;102927 102924 3 EYLESLQCLESDK Unmodified 1612.7291 0.72905304 1601;32 P49792;P0DJD0;P0DJD1;A6NKT7;Q7Z3J3 RANBP2;RGPD1;RGPD2;RGPD3;RGPD4 E3 SUMO-protein ligase RanBP2;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RanBP2-like and GRIP domain-containing protein 3;RanBP2-like and GRIP domain-containing protein 4 no no 0 0 0 By MS/MS 2.5 0.5 1 1 2 78.598 74.52 2 9.9533E-22 92722 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 146.17 128.8 82834000 0 82834000 0 0 0 0 0 0 0 0 0 0 0 0 0 15505 1601;32 14130 129297;129298 102928;102929 102928 1 EYLLGSTAEEK Unmodified 1238.603 0.60304789 319 O43324 EEF1E1 Eukaryotic translation elongation factor 1 epsilon-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 48.001 46.712 2 1.7067E-09 59330 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 144.65 118.27 1291200000 30396000 933040000 5013400 15093000 16367000 27880000 17403000 18741000 13935000 29556000 39276000 41200000 27369000 31270000 44633000 15506 319 14131 129299;129300;129301;129302;129303;129304;129305;129306;129307;129308;129309;129310;129311;129312;129313;129314 102930;102931;102932;102933;102934;102935;102936;102937;102938;102939;102940;102941;102942;102943;102944;102945;102946;102947;102948;102949 102933 18 EYLLSFPAGK Unmodified 1123.5914 0.59136099 3891 Q96JC1 VPS39 Vam6/Vps39-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 79.086 78.158 2 0.010467 97091 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.486 65.541 46696000 0 35706000 0 0 2079600 0 2770800 0 0 0 0 0 3230000 2909000 0 15507 3891 14132 129315;129316;129317;129318;129319 102950;102951;102952 102950 3 EYLLSGDISEAEHCLK Unmodified 1862.872 0.87202888 2696 Q53EL6 PDCD4 Programmed cell death protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 82.166 77.496 3 6.9434E-11 98365 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.07 100.64 408380000 40169000 355080000 13132000 0 0 0 0 0 0 0 0 0 0 0 0 15508 2696 14133 129320;129321;129322;129323 102953;102954;102955;102956;102957 102955 4 EYLPFLNTLK Unmodified 1236.6754 0.67542497 624 O95163 IKBKAP Elongator complex protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.83 3.67 3 1 2 1 2 1 1 1 91.955 88.873 2 0.0015463 111539 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.41 92.183 82290000 6092900 70597000 1484700 0 0 0 0 0 0 2356100 0 0 0 1759200 0 15509 624 14134 129324;129325;129326;129327;129328;129329 102958;102959;102960;102961 102958 4 EYLPIGGLAEFCK Unmodified 1495.7381 0.73810158 730 P00505 GOT2 Aspartate aminotransferase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 5.4 3.77 2 1 2 2 1 1 1 89.527 87.463 2 5.9645E-06 108869 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.71 117.52 167330000 0 153080000 3154600 0 0 0 0 0 0 0 0 0 0 2228500 8859300 15510 730 14135 129330;129331;129332;129333;129334 102962;102963;102964;102965;102966;102967 102962 6 EYLQTHWEEEECQQDVSLLRK Unmodified 2719.2548 0.25479408 4914 Q9UHY7 ENOPH1 Enolase-phosphatase E1 yes yes 0 0 1 By MS/MS 2 0 1 1 79.092 70.962 4 0.0026476 93253 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.476 40.934 23113000 23113000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15511 4914 14136 129335 102968 102968 1 EYLSEEVQAVHK Unmodified 1430.7042 0.70415892 2702 Q53GS9 USP39 U4/U6.U5 tri-snRNP-associated protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.762 46.928 3 0.00084021 52602 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 57.885 53.037 112940000 0 0 0 6196000 5884900 6541800 8324200 8717000 5957800 10503000 10752000 14887000 7601900 11222000 16356000 15512 2702 14137 129336;129337;129338;129339;129340;129341;129342;129343;129344;129345;129346;129347 102969;102970;102971;102972;102973;102974;102975;102976;102977;102978 102972 10 EYLSENEPWVDK Unmodified 1507.6831 0.68308912 564 O75943 RAD17 Cell cycle checkpoint protein RAD17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 65.315 65.397 2 0.001482 74197 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.869 71.253 23074000 0 0 0 2100900 0 2782500 0 0 0 3860700 4413500 0 0 3896000 6020500 15513 564 14138 129348;129349;129350;129351;129352;129353;129354 102979;102980;102981;102982;102983;102984;102985 102981 7 EYLSSLQPR Unmodified 1091.5611 0.56112349 2343 Q13769 THOC5 THO complex subunit 5 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 51.117 51.37 2 0.0051099 56970 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.313 34.526 72239000 0 0 0 0 6009400 0 8084100 11896000 0 0 14768000 17277000 0 0 14205000 15514 2343 14139 129355;129356;129357;129358;129359;129360;129361 102986;102987;102988;102989;102990;102991 102987 6 EYLYFLK Unmodified 974.51132 0.51131975 100 CON__Q7RTT2;CON__Q8N1N4-2;Q8N1N4 KRT78 Keratin, type II cytoskeletal 78 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.533 79.592 2 0.030874 91978 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 74.335 46.81 + 91726000 0 0 0 17344000 2762200 6108900 2958700 21263000 4681300 8459200 5337800 9341600 6014800 3217400 4237200 15515 100 14140 129362;129363;129364;129365;129366;129367;129368;129369;129370;129371;129372;129373 102992 102992 1 EYMEEEIPK Unmodified 1166.5165 0.51654107 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 49.972 48.951 2 0.010476 55474 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 64.265 53.573 68815000 0 33795000 0 0 5042600 0 4648500 0 0 0 13381000 0 0 0 11948000 15516 5189 14141 129374;129375;129376;129377;129378;129379 102993;102994;102995;102996 102995 4 EYNEDEDPAAR Unmodified 1307.5266 0.52658848 2236 Q13123 IK Protein Red yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 19.69 20.082 2 0.042542 19672 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.424 27.892 7751700 0 0 0 0 0 0 0 2496500 0 0 0 0 0 0 5255300 15517 2236 14142 129380;129381 102997 102997 1 EYNEFAEVFLK Unmodified 1387.666 0.66598249 649 O95373 IPO7 Importin-7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.53 3.65 5 1 13 2 3 1 1 1 1 1 1 1 1 1 1 1 1 2 88.085 87.1 2 1.6997E-10 108912 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 152.11 131.16 742510000 180420000 465390000 20612000 3355600 2685900 9317700 2767300 2975800 3928800 9964700 5678200 4729800 3472500 4863700 22345000 15518 649 14143 129382;129383;129384;129385;129386;129387;129388;129389;129390;129391;129392;129393;129394;129395;129396;129397;129398;129399;129400 102998;102999;103000;103001;103002;103003;103004;103005;103006;103007;103008;103009;103010;103011;103012;103013;103014 103001 17 EYNIGVLR Unmodified 962.51853 0.5185304 3701;164 O00507;Q93008 USP9Y;USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-Y;Probable ubiquitin carboxyl-terminal hydrolase FAF-X no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 59.516 59.642 2 0.0075172 68035 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 89.369 45.555 48623000 0 0 0 4348400 0 5978200 0 3385700 2306100 6520600 5604400 0 6690700 0 13789000 15519 164;3701 14144 129401;129402;129403;129404;129405;129406;129407;129408 103015;103016;103017;103018;103019 103016 5 EYNLEQQR Unmodified 1078.5043 0.5043369 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 25.395 25.572 2 0.0050119 27200 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 134.06 78.046 80660000 0 0 0 5670200 4712200 8693500 9743100 7720000 3722300 7575200 0 8677400 6852900 6594300 10699000 15520 3119 14145 129409;129410;129411;129412;129413;129414;129415;129416;129417;129418;129419 103020;103021;103022;103023;103024;103025;103026;103027;103028;103029;103030 103021 11 EYNVNDDSMK Unmodified 1213.4921 0.49211723 2411 Q14527 HLTF Helicase-like transcription factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.776 26.976 2 0.00038329 28305 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 138.26 127.04 593460000 0 0 0 31597000 27547000 43246000 30669000 73974000 29227000 51914000 74631000 69640000 50181000 45855000 64982000 15521 2411 14146 129420;129421;129422;129423;129424;129425;129426;129427;129428;129429;129430;129431 103031;103032;103033;103034;103035;103036;103037;103038;103039;103040;103041;103042 103040 12 EYNVNDDSMK Oxidation (M) 1229.487 0.48703185 2411 Q14527 HLTF Helicase-like transcription factor yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 14.404 14.583 2 0.0016036 14149 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 83.647 74.784 268140000 0 0 0 15395000 17662000 23338000 0 20537000 19830000 32182000 25584000 34681000 31119000 23727000 24086000 15522 2411 14146 129432;129433;129434;129435;129436;129437;129438;129439;129440;129441;129442 103043;103044;103045;103046;103047;103048;103049 103047 3960 5 EYNWNVK Unmodified 951.44503 0.4450311 3366 Q8N7H5 PAF1 RNA polymerase II-associated factor 1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 41.48 41.711 2 0.023833 46444 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 84.025 63.677 213120000 0 0 0 0 10813000 12465000 14744000 16232000 9654300 18593000 31156000 35404000 0 26691000 37370000 15523 3366 14147 129443;129444;129445;129446;129447;129448;129449;129450;129451;129452 103050;103051;103052 103051 3 EYPDFNFVGR Unmodified 1242.5669 0.56693715 3949 Q96PU8 QKI Protein quaking yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.424 77.482 2 0.0040476 88962 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.992 67.82 355600000 0 0 0 13407000 18625000 26146000 21573000 32863000 23389000 36998000 32201000 37393000 31248000 27172000 54582000 15524 3949 14148 129453;129454;129455;129456;129457;129458;129459;129460;129461;129462;129463;129464 103053;103054;103055;103056;103057;103058;103059;103060;103061;103062;103063;103064;103065 103056 13 EYPFILDAFQR Unmodified 1397.698 0.69795133 1451 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes yes 0 0 0 By MS/MS 10 0 1 1 92.389 92.527 2 0.0072105 107329 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.608 43.457 4776200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4776200 15525 1451 14149 129465 103066 103066 1 EYPSEQIIVTEK Unmodified 1434.7242 0.72422566 4201 Q9BW61 DDA1 DET1- and DDB1-associated protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 59.446 59.558 2 0.001229 67008 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 80.763 62.452 62013000 0 0 0 3927800 3420900 0 4246900 0 3300700 5303100 9043600 7048300 6487800 5655800 13578000 15526 4201 14150 129466;129467;129468;129469;129470;129471;129472;129473;129474;129475;129476 103067;103068;103069;103070;103071;103072;103073;103074 103072 8 EYQAGDFEAAER Unmodified 1384.5895 0.58952309 271 O15294 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 42.997 43.269 2 0.0017273 47480 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.5 50.35 86241000 0 0 0 0 5511700 0 4710300 5165400 0 9431300 11064000 12710000 14119000 10662000 12867000 15527 271 14151 129477;129478;129479;129480;129481;129482;129483;129484;129485 103075;103076;103077 103075 1 EYQDAFLFNELK Unmodified 1515.7246 0.72456001 5077 Q9Y230 RUVBL2 RuvB-like 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 87.173 86.122 2 2.589E-13 107369 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 169.76 148.02 993420000 51298000 579880000 23567000 5365700 12345000 22049000 12336000 24236000 17789000 43117000 27791000 31670000 15990000 27883000 98108000 15528 5077 14152 129486;129487;129488;129489;129490;129491;129492;129493;129494;129495;129496;129497;129498;129499;129500;129501;129502 103078;103079;103080;103081;103082;103083;103084;103085;103086;103087;103088;103089;103090;103091;103092;103093;103094;103095 103081 15 EYQDLLNVK Unmodified 1120.5764 0.57643921 870 P08670;Q16352;P07197 VIM;INA;NEFM Vimentin;Alpha-internexin;Neurofilament medium polypeptide no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 2 2 2 2 1 2 2 2 2 2 2 62.805 62.933 1;2 3.0881E-05 71171 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 134.77 102.41 4101400000 0 0 0 146850000 250480000 309070000 321800000 256590000 209880000 397760000 360780000 510010000 411120000 319170000 607950000 15529 870 14153 129503;129504;129505;129506;129507;129508;129509;129510;129511;129512;129513;129514;129515;129516;129517;129518;129519;129520;129521;129522;129523;129524 103096;103097;103098;103099;103100;103101;103102;103103;103104;103105;103106;103107;103108;103109;103110;103111;103112;103113;103114;103115;103116;103117;103118;103119;103120;103121;103122;103123;103124 103107 25 EYQEIENLDK Unmodified 1279.5932 0.59321148 114 L0R819 ASNSD1 yes yes 0 0 0 By matching By MS/MS 2.5 0.5 1 1 1 1 51.909 46.308 2 0.0053926 59941 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.048 88.137 49103000 147790 48955000 0 0 0 0 0 0 0 0 0 0 0 0 0 15530 114 14154 129525;129526 103125 103125 1 EYQELMNTK Oxidation (M) 1170.5227 0.52268908 74 CON__P13647;P13647 KRT5 Keratin, type II cytoskeletal 5 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 21.579 21.783 2 0.0020161 22420 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 91.853 58.303 + 785580000 0 0 0 192710000 47482000 74447000 48440000 75143000 32943000 70504000 58199000 54657000 75163000 32365000 23527000 15531 74 14155 129527;129528;129529;129530;129531;129532;129533;129534;129535;129536;129537;129538;129539;129540;129541;129542;129543;129544;129545;129546;129547;129548;129549;129550 103126;103127;103128;103129;103130;103131;103132;103133;103134;103135;103136;103137;103138;103139;103140;103141;103142;103143 103142 97 18 EYQELMNTK Unmodified 1154.5278 0.52777445 74 CON__P13647;P13647 KRT5 Keratin, type II cytoskeletal 5 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.021 38.219 2 1.6243E-05 41951 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 171.73 127.34 + 1125900000 0 0 0 270770000 64152000 74910000 0 246300000 0 98187000 74324000 106400000 98189000 39377000 53329000 15532 74 14155 129551;129552;129553;129554;129555;129556;129557;129558;129559;129560;129561;129562 103144;103145;103146;103147;103148;103149;103150;103151;103152;103153;103154;103155 103153 10 EYQELMNVK Oxidation (M) 1168.5434 0.54342452 66;58;779;67;80;51;105 P04259;CON__H-INV:HIT000292931;CON__P05787;P05787;CON__P50446;CON__Q8BGZ7;CON__P02538;P02538;CON__P04259 KRT6B;KRT8;KRT6A Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 8;Keratin, type II cytoskeletal 6A no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.17 2.36 1 1 16 2 2 1 1 2 2 1 1 1 1 2 1 1 34.652 34.249 2 0.0018479 38158 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 136.8 74.08 + 997040000 0 48757000 0 198010000 37166000 31820000 118480000 105180000 24663000 44379000 42340000 61611000 212920000 30161000 41560000 15533 779;51;67;80;105;58;66 14156 129563;129564;129565;129566;129567;129568;129569;129570;129571;129572;129573;129574;129575;129576;129577;129578;129579;129580 103156;103157;103158;103159;103160;103161;103162;103163;103164;103165;103166;103167;103168;103169;103170;103171;103172;103173 103170 46;65 14 EYQELMNVK Unmodified 1152.5485 0.5485099 66;58;779;67;80;51;105 P04259;CON__H-INV:HIT000292931;CON__P05787;P05787;CON__P50446;CON__Q8BGZ7;CON__P02538;P02538;CON__P04259 KRT6B;KRT8;KRT6A Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 8;Keratin, type II cytoskeletal 6A no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.154 51.302 2 0.0039053 58852 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 121.62 73.115 + 2021200000 0 0 0 268520000 85513000 105340000 89377000 191820000 55396000 153620000 139910000 184270000 333940000 149670000 263850000 15534 779;51;67;80;105;58;66 14156 129581;129582;129583;129584;129585;129586;129587;129588;129589;129590;129591;129592 103174;103175;103176;103177;103178;103179;103180;103181;103182;103183;103184;103185;103186;103187;103188;103189;103190;103191;103192;103193;103194 103193 21 EYQELMSVK Unmodified 1125.5376 0.53761086 77;69;88 CON__P19013;P19013;CON__P08729;CON__Q3KNV1;P08729 KRT4;KRT7 Keratin, type II cytoskeletal 4;Keratin, type II cytoskeletal 7 no no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 51.598 51.748 2 0.0052193 58526 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 79.906 38.877 + 83243000 0 0 0 0 4930900 0 17658000 35755000 0 0 0 0 9469900 5925600 9502800 15535 77;69;88 14157 129593;129594;129595;129596;129597;129598;129599;129600;129601 103195;103196;103197;103198;103199;103200;103201;103202 103199 8 EYQELMSVK Oxidation (M) 1141.5325 0.53252548 77;69;88 CON__P19013;P19013;CON__P08729;CON__Q3KNV1;P08729 KRT4;KRT7 Keratin, type II cytoskeletal 4;Keratin, type II cytoskeletal 7 no no 0 1 0 By MS/MS By MS/MS By matching By matching 10 0 4 1 1 1 1 34.844 34.871 2 0.0042497 38422 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 75.043 34.265 + 32965000 0 0 0 0 1783600 0 11048000 15442000 0 0 0 0 4691300 0 0 15536 77;69;88 14157 129602;129603;129604;129605 103203 103203 83 1 EYQEPEVPESNQK Unmodified 1575.7053 0.70528113 1331 P33981 TTK Dual specificity protein kinase TTK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.062 36.242 2 1.0642E-12 40012 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 143.96 139.05 337380000 0 0 0 19373000 19570000 21322000 25534000 27017000 21656000 27018000 35029000 37120000 36911000 27359000 39470000 15537 1331 14158 129606;129607;129608;129609;129610;129611;129612;129613;129614;129615;129616;129617 103204;103205;103206;103207;103208;103209;103210;103211;103212;103213;103214;103215 103211 12 EYQEVMNSK Unmodified 1126.4965 0.49647433 81;108 CON__Q6NT21;CON__P78385;P78385;A6NCN2;CON__Q9NSB4;Q9NSB4 KRT83;KRT87P;KRT82 Keratin, type II cuticular Hb3;Putative keratin-87 protein;Keratin, type II cuticular Hb2 no no 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 23.049 23.378 2 0.013227 23611 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.118 32.988 + 7575600 0 0 0 0 0 0 0 2683000 0 1212300 0 0 0 0 3680400 15538 81;108 14159 129618;129619;129620 103216 103216 1 EYQISAGDFPEVK Unmodified 1481.7038 0.70382456 4357 Q9H223 EHD4 EH domain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.334 74.395 2 0.00045577 85829 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 94.297 84.065 100060000 0 0 0 4854600 6580500 6352400 8186500 9389200 5783900 10825000 12386000 10814000 7556900 7564700 9767600 15539 4357 14160 129621;129622;129623;129624;129625;129626;129627;129628;129629;129630;129631;129632 103217;103218;103219;103220;103221;103222;103223;103224;103225;103226;103227;103228 103222 12 EYQMELK Oxidation (M) 955.43208 0.43208315 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 7.86 3.4 1 1 5 2 1 1 1 1 1 19.707 18.741 2 0.031582 23176 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.614 65.848 47684000 0 33328000 0 0 2324700 0 2278400 0 1534400 0 0 0 4812300 0 3405600 15540 3676 14161 129633;129634;129635;129636;129637;129638;129639 103229;103230 103230 2 EYQMELK Unmodified 939.43717 0.43716853 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40.091 39.387 2 0.033156 43407 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 72.234 52.874 412510000 9928500 270700000 0 4934900 6539400 6530600 8122200 12170000 7897700 14949000 14823000 12830000 11232000 12045000 19812000 15541 3676 14161 129640;129641;129642;129643;129644;129645;129646;129647;129648;129649;129650;129651;129652;129653 103231;103232;103233;103234;103235;103236 103236 6 EYQQNNDIGEESTVVWQDLIHETEEAITLRK Unmodified 3686.77 0.77001323 1204 P26374 CHML Rab proteins geranylgeranyltransferase component A 2 yes yes 0 0 1 By MS/MS 2 0 1 1 101.16 93.031 4 3.6115E-44 119748 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.748 92.126 28359000 28359000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15542 1204 14162 129654 103237 103237 1 EYQTIEDK Unmodified 1024.4713 0.47130543 92 CON__Q3SZR3 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching 10 0 5 1 1 1 1 1 19.259 19.357 2 0.0067419 19881 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 98.299 53.688 + 9348700 0 0 0 0 3922900 1145700 0 0 1336000 0 0 0 1542000 1402100 0 15543 92 14163 129655;129656;129657;129658;129659 103238;103239 103239 2 EYQTQLIQR Unmodified 1177.6091 0.60913632 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.335 41.513 2 0.0030241 45795 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 91.626 57.623 143420000 0 0 0 8057500 6103900 10742000 8990500 9203300 5097900 17815000 10494000 15795000 15067000 14406000 21644000 15544 2392 14164 129660;129661;129662;129663;129664;129665;129666;129667;129668;129669;129670;129671 103240;103241;103242;103243;103244;103245;103246;103247;103248;103249;103250 103248 11 EYQVETIVDTLCTNMLSDK Oxidation (M) 2274.0396 0.039564493 3170 Q86VP6 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 90.535 86.475 2 3.3273E-40 107341 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.66 114.9 33080000 0 33080000 0 0 0 0 0 0 0 0 0 0 0 0 0 15545 3170 14165 129672;129673 103251 103251 4788 1 EYQVETIVDTLCTNMLSDK Unmodified 2258.0446 0.044649871 3170 Q86VP6 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 97.186 93.677 3 1.8199E-23 112268 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 113.54 104.69 92204000 0 88888000 3315700 0 0 0 0 0 0 0 0 0 0 0 0 15546 3170 14165 129674;129675;129676 103252;103253;103254 103253 3 EYRDAQEFGADVR Unmodified 1554.7063 0.70628418 441 O60885 BRD4 Bromodomain-containing protein 4 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.181 41.362 3 0.0015537 45077 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.248 55.26 119780000 0 0 0 3877000 3835700 9328500 7520400 13463000 0 12126000 10433000 19844000 9658700 7751700 21941000 15547 441 14166 129677;129678;129679;129680;129681;129682;129683;129684;129685;129686;129687;129688 103255;103256;103257;103258;103259;103260;103261;103262;103263 103258 8 EYRDLTTAGAVTQCYR Unmodified 1902.8894 0.88941028 2078 Q02543 RPL18A 60S ribosomal protein L18a yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 52.996 53.1 3 0.030026 60005 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 28.032 20.44 23644000 0 0 0 0 1766500 0 0 3126100 0 0 0 0 0 0 18751000 15548 2078 14167 129689;129690;129691 103264 103264 1 EYRNAVSK Unmodified 965.49304 0.49304393 4944 Q9UJX3 ANAPC7 Anaphase-promoting complex subunit 7 yes yes 0 0 1 By MS/MS By MS/MS By matching 2.25 0.433 3 1 1 2 1 7.6571 4.5724 2 0.017983 6764 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.15 73.39 275690000 178720000 47140000 49831000 0 0 0 0 0 0 0 0 0 0 0 0 15549 4944 14168 129692;129693;129694;129695 103265;103266 103265 0 EYRPETGSWVFK Unmodified 1497.7252 0.72522871 1707 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.963 65.05 3 0.0029834 73624 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.567 49.843 226470000 0 0 0 5283400 4619100 13816000 8782100 16326000 19559000 15459000 15582000 31443000 16800000 20795000 58007000 15550 1707 14169 129696;129697;129698;129699;129700;129701;129702;129703;129704;129705;129706;129707 103267;103268 103267 2 EYRQMVETELK Unmodified 1424.697 0.69696505 1882 P62258 YWHAE 14-3-3 protein epsilon yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 51.764 46.91 3 0.0022718 61510 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.036 65.29 30057000 0 22125000 7931700 0 0 0 0 0 0 0 0 0 0 0 0 15551 1882 14170 129708;129709 103269;103270 103269 2 EYSFDSRHK Unmodified 1167.5309 0.530886 465 O75153 CLUH Clustered mitochondria protein homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 19.146 15.582 3 0.0086629 22425 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.113 69.892 35660000 23828000 5297200 6534800 0 0 0 0 0 0 0 0 0 0 0 0 15552 465 14171 129710;129711;129712 103271;103272;103273 103271 3 EYSGFAGVSRPR Unmodified 1324.6524 0.65239812 4742 Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 40.291 40.425 3 0.00041483 44370 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 61.235 44.209 101480000 0 0 0 6491100 8007400 8479400 9707000 12792000 5885600 10766000 0 16070000 0 9062800 14214000 15553 4742 14172 129713;129714;129715;129716;129717;129718;129719;129720;129721;129722 103274;103275;103276;103277;103278;103279;103280;103281;103282;103283;103284 103282 8 EYSIGTGSTK Unmodified 1041.4979 0.49785453 1091 P19525 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 25.342 24.789 2 0.005932 25149 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 66.962 52.293 212250000 5975400 94617000 0 0 5200900 8199200 7727700 7725400 6185700 11988000 8649900 15899000 12746000 8924100 18416000 15554 1091 14173 129723;129724;129725;129726;129727;129728;129729;129730;129731;129732;129733;129734;129735 103285;103286;103287;103288;103289;103290;103291;103292;103293;103294;103295;103296;103297;103298 103295 13 EYSLDTR Unmodified 882.40831 0.40831125 4304 Q9GZS3 WDR61 WD repeat-containing protein 61;WD repeat-containing protein 61, N-terminally processed yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 27.685 27.849 2 0.023501 28927 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.699 26.012 137140000 0 0 0 0 7724600 8577600 4927300 9088500 0 17950000 0 0 17798000 23928000 47145000 15555 4304 14174 129736;129737;129738;129739;129740;129741;129742;129743 103299 103299 1 EYSLDTRGK Unmodified 1067.5247 0.52473799 4304 Q9GZS3 WDR61 WD repeat-containing protein 61;WD repeat-containing protein 61, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 23.628 19.638 2 1.246E-05 26264 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 165.72 113.93 146590000 24237000 107560000 14793000 0 0 0 0 0 0 0 0 0 0 0 0 15556 4304 14175 129744;129745;129746 103300;103301;103302 103300 2 EYSLQVLK Unmodified 978.5386 0.53859714 1336 P34897 SHMT2 Serine hydroxymethyltransferase, mitochondrial yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 61.61 61.659 2 0.014574 70131 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.268 32.03 163010000 0 0 0 21801000 22492000 0 30108000 0 30175000 0 4891800 0 35780000 4198900 13566000 15557 1336 14176 129747;129748;129749;129750;129751;129752;129753;129754 103303 103303 1 EYSNENAVVK Unmodified 1151.5459 0.54586736 2313 Q13546 RIPK1 Receptor-interacting serine/threonine-protein kinase 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 21.821 21.668 2 0.00089427 22897 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 117.04 99.05 159450000 0 14095000 0 10715000 6927600 14317000 13322000 0 9096700 13855000 14080000 12697000 16671000 12167000 21505000 15558 2313 14177 129755;129756;129757;129758;129759;129760;129761;129762;129763;129764;129765;129766 103304;103305;103306;103307;103308;103309;103310;103311;103312;103313 103304 10 EYSQLEQR Unmodified 1051.4934 0.49343786 5006 Q9ULV0 MYO5B Unconventional myosin-Vb yes yes 0 0 0 By MS/MS By matching By matching By matching 10 0 4 1 1 1 1 22.054 22.356 2 0.045385 23548 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 48.561 28.006 14457000 0 0 0 0 1630300 0 0 0 0 0 3317500 6628000 0 2880900 0 15559 5006 14178 129767;129768;129769;129770 103314 103314 1 EYSQMQQQNTQK Unmodified 1511.6675 0.66745583 3540 Q8WUB8 PHF10 PHD finger protein 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.687 13.877 2 2.7693E-08 12647 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 157.96 133.93 45868000 0 0 0 0 3097200 2522900 2882400 4164900 2837500 3814100 5323300 5498500 4009100 4026600 7691500 15560 3540 14179 129771;129772;129773;129774;129775;129776;129777;129778;129779;129780;129781;129782 103315;103316;103317;103318;103319;103320;103321;103322;103323;103324;103325 103316 11 EYSSELNAPSQESDSHPR Unmodified 2031.877 0.87699092 1596 P49756 RBM25 RNA-binding protein 25 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 33.184 33.368 2;3 7.3885E-39 36019 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 136.63 130.66 1212500000 0 0 0 98964000 69952000 55205000 99018000 67772000 74005000 109520000 150420000 133510000 106490000 105600000 142030000 15561 1596 14180 129783;129784;129785;129786;129787;129788;129789;129790;129791;129792;129793;129794;129795;129796;129797;129798;129799;129800;129801;129802;129803;129804;129805;129806 103326;103327;103328;103329;103330;103331;103332;103333;103334;103335;103336;103337;103338;103339 103337 14 EYSSELNAPSQESDSHPRK Unmodified 2159.972 0.97195393 1596 P49756 RBM25 RNA-binding protein 25 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 26.907 27.104 3;4 1.0534E-95 28825 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 148.44 139.95 1026800000 0 0 0 50824000 38578000 84637000 70003000 51573000 92707000 96659000 118240000 99323000 126270000 89494000 108530000 15562 1596 14181 129807;129808;129809;129810;129811;129812;129813;129814;129815;129816;129817;129818;129819;129820;129821;129822;129823;129824;129825;129826;129827;129828;129829;129830 103340;103341;103342;103343;103344;103345;103346;103347;103348;103349;103350;103351;103352;103353;103354;103355;103356;103357;103358;103359;103360;103361;103362;103363;103364;103365;103366 103354 25 EYSTSIATR Unmodified 1026.4982 0.49818889 564 O75943 RAD17 Cell cycle checkpoint protein RAD17 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 27.119 27.461 2 0.025904 28441 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.04 36.116 10669000 0 0 0 0 0 3552900 0 0 0 0 0 0 0 0 7116100 15563 564 14182 129831;129832 103367 103367 1 EYTACELMNIYK Oxidation (M) 1549.6793 0.67926607 4625 Q9NSD9 FARSB Phenylalanine--tRNA ligase beta subunit yes yes 0 1 0 By MS/MS 2 0 1 1 74.087 68.932 2 0.0066418 86590 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.334 61.029 47784000 0 47784000 0 0 0 0 0 0 0 0 0 0 0 0 0 15564 4625 14183 129833 103368 103368 6020 1 EYTACELMNIYK Unmodified 1533.6844 0.68435145 4625 Q9NSD9 FARSB Phenylalanine--tRNA ligase beta subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.25 3.34 2 1 1 2 1 1 82.452 79.883 2 3.5722E-13 99093 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.5 119.27 215510000 0 200410000 2904900 0 0 0 0 0 0 0 0 0 0 0 12200000 15565 4625 14183 129834;129835;129836;129837 103369;103370;103371;103372 103369 4 EYTAGREADDIVNWLK Unmodified 1878.9112 0.91119158 838 P07237 P4HB Protein disulfide-isomerase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 87.701 83.036 3 0.00042119 104320 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.317 68.431 472430000 156450000 312930000 3045200 0 0 0 0 0 0 0 0 0 0 0 0 15566 838 14184 129838;129839;129840;129841 103373;103374;103375;103376 103374 4 EYTDENIQEGLAPKPPPPIK Unmodified 2235.1423 0.14231373 338 O43513 MED7 Mediator of RNA polymerase II transcription subunit 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.55 1 1 4 2 1 1 1 1 70.998 69.271 3 8.5771E-28 78857 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.768 67.019 30648000 0 9870500 0 0 0 0 0 0 0 0 0 0 0 0 20777000 15567 338 14185 129842;129843;129844;129845;129846;129847 103377;103378;103379;103380;103381;103382;103383;103384 103380 8 EYTDVYPEIIER Unmodified 1525.73 0.73003931 5031 Q9UNF1;Q9Y5V3 MAGED2;MAGED1 Melanoma-associated antigen D2;Melanoma-associated antigen D1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.3 2.25 2 21 1 1 2 2 1 2 1 1 2 2 2 2 2 2 76.155 75.645 2;3 5.8661E-55 87490 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 190.86 174.66 1350800000 9720700 122890000 0 53558000 75623000 93103000 88333000 90934000 82444000 118000000 128290000 130030000 116810000 82234000 158820000 15568 5031 14186 129848;129849;129850;129851;129852;129853;129854;129855;129856;129857;129858;129859;129860;129861;129862;129863;129864;129865;129866;129867;129868;129869;129870 103385;103386;103387;103388;103389;103390;103391;103392;103393;103394;103395;103396;103397;103398;103399;103400;103401;103402;103403 103395 19 EYTDVYPEIIERAGYSLEK Unmodified 2274.1056 0.10559387 5031 Q9UNF1 MAGED2 Melanoma-associated antigen D2 yes yes 0 0 1 By MS/MS By MS/MS 2.67 0.471 1 2 2 1 89.774 84.81 3 0.00014943 102742 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 75.533 66.676 142240000 129320000 12917000 0 0 0 0 0 0 0 0 0 0 0 0 0 15569 5031 14187 129871;129872;129873 103404;103405 103404 1 EYTEEIERLK Unmodified 1308.6561 0.65614609 1695 P52732 KIF11 Kinesin-like protein KIF11 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 54.645 49.293 3 0.002264 63913 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.363 56.353 88288000 0 88288000 0 0 0 0 0 0 0 0 0 0 0 0 0 15570 1695 14188 129874;129875 103406;103407;103408 103406 3 EYTEGLLDNVTVLIGIAYEGK Unmodified 2296.1838 0.18384419 701 O95861 BPNT1 3'(2'),5'-bisphosphate nucleotidase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.5 0.5 4 4 4 3 1 101.56 96.882 2;3 2.5254E-86 120740 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 157.68 151.3 115780000 95324000 17425000 3035300 0 0 0 0 0 0 0 0 0 0 0 0 15571 701 14189 129876;129877;129878;129879;129880;129881;129882;129883 103409;103410;103411;103412;103413;103414;103415;103416;103417 103409 8 EYTESSPSEDK Unmodified 1270.5201 0.52010612 3970 Q96RL7 VPS13A Vacuolar protein sorting-associated protein 13A yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.204 12.353 2 0.0023696 10734 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.016 61.121 33300000 0 0 0 2053000 2138900 1846100 2217300 2136400 2250400 2785500 2373700 4981600 4007900 2588600 3920900 15572 3970 14190 129884;129885;129886;129887;129888;129889;129890;129891;129892;129893;129894;129895 103418;103419;103420;103421;103422;103423;103424;103425;103426;103427 103421 10 EYTGFQVALLNK Unmodified 1381.7242 0.72416608 4982 Q9UL03 INTS6 Integrator complex subunit 6 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 80.534 80.679 2 0.0057765 93441 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 74.464 46.64 43487000 0 0 0 0 0 7209500 4160300 3226400 4942200 0 5659200 0 4327800 4957700 9003500 15573 4982 14191 129896;129897;129898;129899;129900;129901;129902;129903 103428;103429;103430 103430 1 EYTINIHK Unmodified 1016.5291 0.52909508 1926 P62899 RPL31 60S ribosomal protein L31 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 36.604 36.8 2 0.0068497 40424 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 94.006 71.515 358320000 0 0 0 17411000 20102000 0 30973000 26965000 24941000 36507000 32777000 54273000 33188000 27641000 53544000 15574 1926 14192 129904;129905;129906;129907;129908;129909;129910;129911;129912;129913;129914 103431;103432;103433;103434;103435 103434 4 EYTINIHKR Unmodified 1172.6302 0.63020611 1926 P62899 RPL31 60S ribosomal protein L31 yes yes 0 0 1 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 27.273 27.593 3 0.026703 28387 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.334 18.935 40336000 0 0 0 3444900 0 0 0 0 0 11294000 0 13849000 0 0 11748000 15575 1926 14193 129915;129916;129917;129918 103436 103436 1 EYTLDVYR Unmodified 1057.508 0.50802529 1740 P54577 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 57.245 57.365 2 0.0091721 64349 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 83.753 42.1 226640000 0 0 0 7914600 5593900 18640000 9891600 9447600 8398500 13925000 25470000 25810000 10926000 21899000 68720000 15576 1740 14194 129919;129920;129921;129922;129923;129924;129925;129926;129927;129928;129929;129930 103437;103438;103439;103440;103441 103439 5 EYTNPEQIK Unmodified 1120.5401 0.5400537 199 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 30.123 30.234 2 0.020387 33208 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 53.166 36.39 24933000 0 0 0 0 1403200 6153400 0 0 2495700 4995000 4772300 0 0 5113300 0 15577 199 14195 129931;129932;129933;129934;129935;129936 103442;103443;103444 103444 3 EYTPFPPPQPESQIDK Unmodified 1871.8941 0.89414453 2324 Q13601 KRR1 KRR1 small subunit processome component homolog yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 71.203 71.198 2 0.00033656 81785 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 66.262 57.533 30285000 0 0 0 1905200 3061400 2882600 0 0 0 3882100 3124900 6456100 5012500 3960100 0 15578 2324 14196 129937;129938;129939;129940;129941;129942;129943;129944 103445;103446;103447;103448;103449;103450 103446 6 EYTSNVFLQGK Unmodified 1284.635 0.63501672 4101 Q9BQP7 MGME1 Mitochondrial genome maintenance exonuclease 1 yes yes 0 0 0 By MS/MS 2 0 1 1 63.748 57.84 2 0.0048063 74207 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.601 68.855 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15579 4101 14197 129945 103451 103451 1 EYVCRVEGEFPTEEVTCK Unmodified 2230.9875 0.98746934 3292 Q8IZ73 RPUSD2 RNA pseudouridylate synthase domain-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 68.673 64.48 3 0.00025502 78838 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 63.145 53.223 7677800 0 4082300 3595500 0 0 0 0 0 0 0 0 0 0 0 0 15580 3292 14198 129946;129947;129948 103452;103453;103454;103455 103453 4 EYVEHTVK Unmodified 1003.4975 0.4974606 562 O75937 DNAJC8 DnaJ homolog subfamily C member 8 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 12.365 12.244 2 0.012186 10532 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.213 47.688 336390000 0 305070000 0 0 0 0 1299700 1073600 1106900 1837700 4115300 4575100 1850900 2998700 12465000 15581 562 14199 129949;129950;129951;129952;129953;129954;129955;129956;129957;129958 103456;103457;103458;103459 103457 3 EYVESQLQR Unmodified 1150.5619 0.56185177 3402 Q8NBS9 TXNDC5 Thioredoxin domain-containing protein 5 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 33.785 34.214 2 0.031872 37172 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 47.574 26.274 103250000 0 0 0 0 0 0 0 4638200 0 4470100 17611000 17218000 7605400 0 51706000 15582 3402 14200 129959;129960;129961;129962;129963;129964 103460 103460 1 EYVTCHTCRSPDTILQK Unmodified 2106.9827 0.98265874 1099 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 49.925 44.002 4 0.0024405 60597 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.338 38.31 73252000 69708000 0 3544100 0 0 0 0 0 0 0 0 0 0 0 0 15583 1099 14201 129965;129966 103461;103462 103461 2 EYWFVLTAESLSWYKDEEEK Unmodified 2551.1795 0.17948709 1630 P50570 DNM2 Dynamin-2 yes yes 0 0 1 By MS/MS 2 0 1 1 99.575 91.445 3 0.0086971 117867 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 41.31 35.857 8684800 8684800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15584 1630 14202 129967 103463 103463 0 EYWMDPEGEMK 2 Oxidation (M) 1445.5479 0.54791755 1730 P53999 SUB1 Activated RNA polymerase II transcriptional coactivator p15 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 44.586 44.899 2 9.4705E-06 50605 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 118.71 118.4 278480000 0 0 0 0 0 17241000 26392000 19758000 21352000 28606000 35879000 27615000 56809000 18055000 26775000 15585 1730 14203 129968;129969;129970;129971;129972;129973;129974;129975;129976;129977;129978 103464;103465;103466;103467;103468;103469;103470;103471;103472;103473;103474;103475;103476 103474 2808;2809 13 EYWMDPEGEMK Oxidation (M) 1429.553 0.55300293 1730 P53999 SUB1 Activated RNA polymerase II transcriptional coactivator p15 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 1 2 2 2 2 2 2 2 2 2 57.692 57.874 2 0.00081188 66786 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 74.165 70.755 583960000 0 0 0 13751000 11105000 44962000 41435000 40594000 42767000 57787000 87759000 76420000 69150000 0 98233000 15586 1730 14203 129979;129980;129981;129982;129983;129984;129985;129986;129987;129988;129989;129990;129991;129992;129993;129994;129995;129996;129997;129998 103477;103478;103479;103480;103481;103482;103483;103484;103485;103486;103487;103488;103489;103490;103491;103492;103493;103494;103495 103495 2808;2809 18 EYWMDPEGEMK Unmodified 1413.5581 0.5580883 1730 P53999 SUB1 Activated RNA polymerase II transcriptional coactivator p15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.619 70.691 2 0.00057517 81051 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 80.755 79.252 401270000 0 0 0 9935000 14920000 24830000 15683000 27658000 21914000 41996000 50659000 39487000 27137000 28621000 98433000 15587 1730 14203 129999;130000;130001;130002;130003;130004;130005;130006;130007;130008;130009;130010 103496;103497;103498;103499;103500;103501;103502;103503;103504;103505;103506;103507;103508 103502 13 EYWMDPEGEMKPGRK Oxidation (M) 1867.8233 0.82330455 1730 P53999 SUB1 Activated RNA polymerase II transcriptional coactivator p15 yes yes 0 1 2 By MS/MS 10 0 1 1 45.647 46.399 3 0.013782 51718 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 40.211 34.893 14793000 0 0 0 0 0 0 0 0 0 0 0 14793000 0 0 0 15588 1730 14204 130011 103509 103509 2808;2809 1 EYYEALPELK Unmodified 1253.618 0.61796967 828 P06737 PYGL Glycogen phosphorylase, liver form yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 76.514 72.317 2 0.0047016 90213 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.37 74.367 137060000 0 137060000 0 0 0 0 0 0 0 0 0 0 0 0 0 15589 828 14205 130012;130013 103510;103511 103510 2 EYYTQNMER Unmodified 1232.5132 0.51318702 4690 Q9NW64 RBM22 Pre-mRNA-splicing factor RBM22 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.361 30.55 2 0.0030483 33103 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 91.318 85.215 140440000 0 0 0 8934500 7276600 9853300 7333700 8569700 6964900 11215000 13633000 13691000 11002000 15206000 26758000 15590 4690 14206 130014;130015;130016;130017;130018;130019;130020;130021;130022;130023;130024;130025 103512;103513;103514;103515;103516;103517;103518;103519;103520;103521 103513 10 EYYTQNMER Oxidation (M) 1248.5081 0.50810164 4690 Q9NW64 RBM22 Pre-mRNA-splicing factor RBM22 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 17.298 17.434 2 0.013778 17151 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 52.716 52.716 16390000 0 0 0 2409400 0 2080900 1347900 1122600 1951700 1476500 0 0 3560400 0 2440300 15591 4690 14206 130026;130027;130028;130029;130030;130031;130032;130033 103522;103523;103524 103523 6090 3 FAAACREGEDNSK Unmodified 1453.6256 0.62559102 2075 Q02413;Q86SJ6 DSG1;DSG4 Desmoglein-1;Desmoglein-4 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 2 2 2 2 1 1 2 2 2 2 1 11.055 11.151 2;3 0.00040955 9906 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 76.073 71.729 175610000 0 0 0 44699000 8378100 9185100 11684000 10575000 6779100 15527000 0 23054000 22880000 11834000 11013000 15592 2075 14207 130034;130035;130036;130037;130038;130039;130040;130041;130042;130043;130044;130045;130046;130047;130048;130049;130050;130051;130052 103525;103526;103527;103528;103529;103530;103531 103531 4 FAAATGATPIAGR Unmodified 1202.6408 0.6407708 875 P08865 RPSA 40S ribosomal protein SA yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.401 45.57 2 2.6792E-09 49832 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 140.16 117.09 737520000 0 0 0 37304000 18296000 25071000 25014000 25314000 15494000 38220000 100210000 115330000 55138000 85600000 196520000 15593 875 14208 130053;130054;130055;130056;130057;130058;130059;130060;130061;130062;130063;130064 103532;103533;103534;103535;103536;103537;103538;103539;103540;103541;103542;103543;103544 103535 13 FAAEDIIDPIAK Unmodified 1301.6867 0.68671794 202 O14686 KMT2D Histone-lysine N-methyltransferase 2D yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 85.239 81.235 2 2.8258E-05 101037 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.98 91.98 108210000 0 108210000 0 0 0 0 0 0 0 0 0 0 0 0 0 15594 202 14209 130065;130066 103545;103546 103545 2 FAAEEFK Unmodified 840.40177 0.4017693 1863 P61960 UFM1 Ubiquitin-fold modifier 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.3 2.1 1 9 1 1 1 1 1 1 1 1 1 1 39.43 39.089 2 0.031783 48039 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 88.029 64.992 218460000 0 37556000 0 9457800 8829000 15920000 12328000 0 9110300 23965000 25768000 27993000 0 0 47530000 15595 1863 14210 130067;130068;130069;130070;130071;130072;130073;130074;130075;130076 103547;103548 103548 2 FAAFIDK Unmodified 810.42759 0.42759012 81 CON__Q6NT21;CON__P78385;P78385 KRT83 Keratin, type II cuticular Hb3 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 54.05 54.176 2 0.03326 61526 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 72.138 57.557 + 233910000 0 0 0 6555300 4499400 9506600 7369500 129350000 2948900 7771600 5327400 9573500 0 4301000 46700000 15596 81 14211 130077;130078;130079;130080;130081;130082;130083;130084;130085;130086;130087 103549 103549 1 FAALDNEEEDKEEEIIK Unmodified 2020.9477 0.94769624 3421 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.2 3.27 5 2 23 3 3 1 2 1 2 2 2 2 2 2 2 2 2 2 66.177 64.879 2;3 1.1511E-46 74654 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 115.31 106.71 1202100000 314270000 333650000 13355000 21401000 18631000 37833000 29522000 36987000 45729000 53780000 48681000 86699000 36311000 43179000 82080000 15597 3421 14212 130088;130089;130090;130091;130092;130093;130094;130095;130096;130097;130098;130099;130100;130101;130102;130103;130104;130105;130106;130107;130108;130109;130110;130111;130112;130113;130114;130115;130116;130117 103550;103551;103552;103553;103554;103555;103556;103557;103558;103559;103560;103561;103562;103563;103564;103565;103566;103567;103568;103569;103570;103571 103571 18 FAALMQHQAK Unmodified 1143.5859 0.58589846 4954 Q9UK59 DBR1 Lariat debranching enzyme yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 37.089 34.076 2 0.0021721 34193 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.916 64.29 19561000 15935000 0 0 0 0 0 0 0 0 0 0 0 0 0 3625700 15598 4954 14213 130118;130119 103572;103573 103572 1 FAALMQHQAK Oxidation (M) 1159.5808 0.58081308 4954 Q9UK59 DBR1 Lariat debranching enzyme yes yes 0 1 0 By MS/MS 2 0 1 1 28.864 23.345 2 0.01605 32935 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.754 63.799 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15599 4954 14213 130120 103574 103574 6300 1 FAANINK Unmodified 776.41809 0.41808807 1009 P14868 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 24.93 24.005 2 0.013446 32967 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 130.01 73.752 2159600000 774240000 1083400000 32513000 13478000 10426000 19317000 14366000 15507000 12099000 24288000 24281000 26749000 21307000 28545000 59141000 15600 1009 14214 130121;130122;130123;130124;130125;130126;130127;130128;130129;130130;130131;130132;130133;130134;130135;130136 103575;103576;103577;103578;103579;103580;103581;103582;103583;103584 103581 9 FAANPNQNK Unmodified 1002.4883 0.4882929 2566 Q15717 ELAVL1 ELAV-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 13.175 12.523 2 0.00094487 15132 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 143.02 120.89 566330000 34105000 282800000 0 18042000 14143000 19032000 21248000 0 16793000 27014000 32639000 25577000 33304000 21366000 20270000 15601 2566 14215 130137;130138;130139;130140;130141;130142;130143;130144;130145;130146;130147;130148;130149;130150;130151 103585;103586;103587;103588;103589;103590;103591;103592;103593;103594;103595;103596 103587 11 FAANSTLK Unmodified 850.45487 0.45486751 4642 Q9NUA8 ZBTB40 Zinc finger and BTB domain-containing protein 40 yes yes 0 0 0 By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 25.149 25.193 2 0.034963 26260 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 52.786 33.98 57993000 0 0 0 6104600 7444400 7300300 7369300 6829900 0 0 0 0 15322000 7622400 0 15602 4642 14216 130152;130153;130154;130155;130156;130157;130158 103597;103598 103598 2 FAAQELIEVK Unmodified 1146.6285 0.62847478 3141 Q86U44 METTL3 N6-adenosine-methyltransferase 70 kDa subunit yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 80.626 72.495 2 0.024127 93414 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.647 45.228 7093500 7093500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15603 3141 14217 130159;130160 103599;103600 103599 2 FAASGGFLHHMAGLSSSK Oxidation (M) 1819.8676 0.86755262 4243 Q9BY77 POLDIP3 Polymerase delta-interacting protein 3 yes yes 0 1 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 48.452 48.601 3 0.00043677 54693 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 47.113 36.645 26056000 0 0 0 0 0 12268000 7288100 0 0 0 0 0 6500500 0 0 15604 4243 14218 130161;130162;130163 103601 103601 5713 1 FAATTVEEILAK Unmodified 1291.7024 0.702368 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 83.215 83.278 2 1.8819E-05 95956 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 123.63 115.98 370920000 0 0 0 7862700 20280000 23028000 20694000 21587000 25819000 41709000 37849000 48340000 17949000 30221000 75579000 15605 4285 14219 130164;130165;130166;130167;130168;130169;130170;130171;130172;130173;130174;130175 103602;103603;103604;103605;103606;103607;103608;103609;103610;103611;103612 103605 8 FAAVGFHK Unmodified 875.46537 0.46537261 3401 Q8NBQ5 HSD17B11 Estradiol 17-beta-dehydrogenase 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.692 36.873 2 0.0099045 41280 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 81.381 47.643 271660000 0 0 0 14348000 20326000 23021000 15252000 28729000 12537000 24822000 17297000 45364000 25065000 20540000 24358000 15606 3401 14220 130176;130177;130178;130179;130180;130181;130182;130183;130184;130185;130186;130187 103613;103614;103615;103616;103617;103618;103619;103620;103621;103622;103623;103624 103624 12 FAAYFQQGDMESNGK Oxidation (M) 1707.7199 0.71988533 829;93 P06744;CON__Q3ZBD7 GPI Glucose-6-phosphate isomerase no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 50.818 51.328 2 2.0867E-31 56935 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 150.09 144.12 + 145090000 0 0 0 0 0 0 0 0 0 0 34779000 28920000 0 16319000 65069000 15607 829;93 14221 130188;130189;130190;130191 103625;103626;103627;103628;103629 103625 125 5 FAAYFQQGDMESNGK Unmodified 1691.725 0.72497071 829;93 P06744;CON__Q3ZBD7 GPI Glucose-6-phosphate isomerase no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 60.792 61.203 2 1.7082E-27 68949 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 136.96 130.52 + 148370000 0 0 0 0 0 0 0 0 0 0 19656000 21535000 0 14574000 92607000 15608 829;93 14221 130192;130193;130194;130195 103630;103631;103632;103633;103634 103630 5 FACESIVEEYEDELIEFFSR Unmodified 2511.1152 0.11517228 5095 Q9Y2B0 CNPY2 Protein canopy homolog 2 yes yes 0 0 0 By MS/MS 2 0 2 2 104.88 96.751 2;3 8.5972E-16 124253 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.334 85.786 9337200 9337200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15609 5095 14222 130196;130197 103635;103636 103636 2 FACESIVEEYEDELIEFFSREADNVK Unmodified 3167.4281 0.42812657 5095 Q9Y2B0 CNPY2 Protein canopy homolog 2 yes yes 0 0 1 By MS/MS By MS/MS 2.67 0.471 1 2 1 2 103.21 99.246 3 2.8067E-121 103463 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 159.73 157.28 217600000 25697000 191900000 0 0 0 0 0 0 0 0 0 0 0 0 0 15610 5095 14223 130198;130199;130200 103637 103637 1 FACHSASLTVR Unmodified 1247.6081 0.60809046 2508 Q15233 NONO Non-POU domain-containing octamer-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 33.966 34.151 3 0.0015961 37528 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 78.548 71.134 343140000 0 0 0 16130000 15876000 20582000 20974000 21750000 15065000 0 41628000 79770000 33099000 31348000 46916000 15611 2508 14224 130201;130202;130203;130204;130205;130206;130207;130208;130209;130210;130211 103638;103639;103640;103641;103642;103643;103644 103642 5 FACNGTVIEHPEYGEVIQLQGDQRK Unmodified 2887.3923 0.39229061 427;1442 O60739;P41567 EIF1B;EIF1 Eukaryotic translation initiation factor 1b;Eukaryotic translation initiation factor 1 no no 0 0 1 By MS/MS 2 0 1 1 79.352 71.221 4 0.00010503 93636 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.247 53.773 14000000 14000000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15612 427;1442 14225 130212 103645 103645 1 FADDTYTESYISTIGVDFK Unmodified 2170.9946 0.99464644 1911;4338 P62820;Q9H0U4 RAB1A;RAB1B Ras-related protein Rab-1A;Ras-related protein Rab-1B no no 0 0 0 By MS/MS 2 0 1 1 93.558 85.428 2 7.0936E-05 110663 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.264 90.186 7677700 7677700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15613 1911;4338 14226 130213 103646 103646 1 FADEHVPGSPFTVK Unmodified 1529.7514 0.75144346 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.96 3.78 8 3 17 3 4 4 1 1 1 1 1 1 1 2 2 2 2 2 67.148 65.239 2;3 1.1788E-29 80909 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 171.67 149.67 1867400000 191730000 903130000 485590000 8071700 6436900 18200000 10118000 12237000 8812100 23753000 37594000 33829000 17456000 25928000 84541000 15614 487 14227 130214;130215;130216;130217;130218;130219;130220;130221;130222;130223;130224;130225;130226;130227;130228;130229;130230;130231;130232;130233;130234;130235;130236;130237;130238;130239;130240;130241 103647;103648;103649;103650;103651;103652;103653;103654;103655;103656;103657;103658;103659;103660;103661;103662;103663;103664;103665;103666;103667 103663 17 FADFMVK Oxidation (M) 872.41023 0.4102255 1440 P41250 GARS Glycine--tRNA ligase yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 52.263 51.6 1;2 0.024041 64401 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 63.148 28.042 191840000 0 12826000 3430700 9270700 9939000 14798000 11681000 11106000 12148000 15940000 24451000 24645000 20265000 21340000 0 15615 1440 14228 130242;130243;130244;130245;130246;130247;130248;130249;130250;130251;130252;130253;130254 103668;103669;103670;103671;103672;103673;103674 103671 6 FADIGNTVK Unmodified 963.50255 0.50254598 936 P11172 UMPS Uridine 5'-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5'-phosphate decarboxylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 46.148 40.706 2 0.007643 53363 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.933 74.083 687520000 21157000 642410000 23954000 0 0 0 0 0 0 0 0 0 0 0 0 15616 936 14229 130255;130256;130257;130258 103675;103676;103677;103678;103679;103680;103681 103677 7 FADLAASHLEAIR Unmodified 1412.7412 0.74121312 2657 Q2TAM9 TUSC1 Tumor suppressor candidate gene 1 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 69.618 69.876 3 0.0021215 79575 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.088 37.82 33477000 0 0 0 0 0 0 0 0 0 3716900 5186000 7976600 2072800 4664200 9860000 15617 2657 14230 130259;130260;130261;130262;130263;130264 103682;103683;103684;103685 103683 4 FADLSEAANR Unmodified 1092.52 0.51998696 870 P08670 VIM Vimentin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.026 41.204 2 1.6242E-42 46233 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 188.98 133.3 5653100000 0 0 0 302410000 364380000 644680000 458110000 351420000 270560000 428900000 568810000 634570000 511410000 390470000 727380000 15618 870 14231 130265;130266;130267;130268;130269;130270;130271;130272;130273;130274;130275;130276 103686;103687;103688;103689;103690;103691;103692;103693;103694;103695;103696;103697;103698;103699;103700;103701 103694 16 FADLSEAANRNNDALR Unmodified 1775.8551 0.85507368 870 P08670 VIM Vimentin yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.97 2.68 4 27 2 1 1 2 2 2 2 3 2 2 3 2 2 2 3 51.172 51.072 2;3 1.3818E-205 56822 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 228.73 191.31 23150000000 15473000 226120 580100 1031500000 1080700000 1772100000 1379400000 1543400000 1705100000 1772600000 2537900000 2857800000 2461600000 1925900000 3065700000 15619 870 14232 130277;130278;130279;130280;130281;130282;130283;130284;130285;130286;130287;130288;130289;130290;130291;130292;130293;130294;130295;130296;130297;130298;130299;130300;130301;130302;130303;130304;130305;130306;130307 103702;103703;103704;103705;103706;103707;103708;103709;103710;103711;103712;103713;103714;103715;103716;103717;103718;103719;103720;103721;103722;103723;103724;103725;103726;103727;103728;103729;103730;103731;103732;103733;103734;103735;103736 103732 33 FADLSEAANRNNDALRQAK Unmodified 2103.0457 0.045727999 870 P08670 VIM Vimentin yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 4.5 3.5 7 3 4 4 4 2 1 1 1 1 51.952 47.828 3;4 6.684E-11 63133 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.891 85.419 1551800000 1386600000 101080000 35946000 0 0 4390300 0 0 10546000 0 6174000 7027600 0 0 0 15620 870 14233 130308;130309;130310;130311;130312;130313;130314;130315;130316;130317;130318;130319;130320;130321 103737;103738;103739;103740;103741;103742;103743;103744;103745;103746;103747;103748 103738 11 FADQDDIGNVSFDR Unmodified 1597.7009 0.70086445 2727 Q5H9R7 PPP6R3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 67.597 67.952 2 0.00054151 77164 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.519 52.547 19734000 0 0 0 0 0 0 0 0 0 0 0 0 0 4596800 15137000 15621 2727 14234 130322;130323;130324 103749;103750;103751;103752 103750 4 FADQHVPGSPFSVK Unmodified 1514.7518 0.75177781 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.15 3.73 7 3 17 4 4 2 2 1 2 1 1 2 2 2 2 2 63.766 61.708 2;3 7.7259E-12 80533 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 137.01 113.69 8426300000 3597300000 1976900000 1397700000 64146000 0 100230000 0 89631000 53377000 131760000 191580000 188640000 121800000 166540000 346710000 15622 1124 14235 130325;130326;130327;130328;130329;130330;130331;130332;130333;130334;130335;130336;130337;130338;130339;130340;130341;130342;130343;130344;130345;130346;130347;130348;130349;130350;130351 103753;103754;103755;103756;103757;103758;103759;103760;103761;103762;103763;103764;103765;103766;103767;103768;103769;103770;103771;103772;103773;103774;103775 103757 15 FAEAECLAESHQHLSK Unmodified 1855.8523 0.85229649 2201 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 42.074 42.45 3 1.6062E-10 47632 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 93.909 89.292 101210000 0 0 0 0 0 0 0 15914000 0 21316000 13777000 0 20591000 0 29611000 15623 2201 14236 130352;130353;130354;130355;130356 103776;103777;103778 103778 1 FAEAFEAIPR Unmodified 1149.5819 0.58185893 1641 P50990 CCT8 T-complex protein 1 subunit theta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.67 3.86 7 2 12 3 3 3 1 1 1 1 1 1 1 1 1 1 1 1 74.522 73.345 2;3 8.9536E-06 89127 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 130.75 105.85 4775000000 118300000 856020000 458890000 154820000 153670000 345250000 164810000 203470000 185660000 311990000 375030000 386290000 252020000 287090000 521670000 15624 1641 14237 130357;130358;130359;130360;130361;130362;130363;130364;130365;130366;130367;130368;130369;130370;130371;130372;130373;130374;130375;130376;130377 103779;103780;103781;103782;103783;103784;103785;103786;103787;103788;103789;103790;103791;103792;103793;103794;103795;103796;103797;103798;103799;103800;103801;103802;103803;103804;103805;103806;103807;103808 103798 30 FAEAFEAIPRALAENSGVK Unmodified 2019.0425 0.042540102 1641 P50990 CCT8 T-complex protein 1 subunit theta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.33 0.471 6 3 4 3 2 91.466 86.888 3 1.1202E-71 109507 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 154.49 138.98 1017300000 626680000 384130000 6466300 0 0 0 0 0 0 0 0 0 0 0 0 15625 1641 14238 130378;130379;130380;130381;130382;130383;130384;130385;130386 103809;103810;103811;103812;103813;103814;103815;103816;103817;103818;103819;103820 103816 12 FAEALGSTEAK Unmodified 1122.5557 0.55570376 1977 P78347 GTF2I General transcription factor II-I yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 37.85 36.488 2 1.9343E-05 40963 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 132.01 118.63 3774800000 31072000 1494400000 15163000 167660000 150460000 224080000 127550000 128070000 119340000 221090000 191840000 225370000 267070000 206690000 204950000 15626 1977 14239 130387;130388;130389;130390;130391;130392;130393;130394;130395;130396;130397;130398;130399;130400;130401;130402;130403 103821;103822;103823;103824;103825;103826;103827;103828;103829;103830;103831;103832;103833;103834;103835;103836;103837;103838;103839 103823 19 FAEASEEAVSVQR Unmodified 1421.6787 0.67867245 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 43.709 42.789 2 4.5548E-34 53789 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 177.57 150.78 150170000 0 61497000 0 0 8326100 0 0 8420000 7398400 0 15851000 17071000 0 8859500 22748000 15627 1286 14240 130404;130405;130406;130407;130408;130409;130410;130411;130412;130413 103840;103841;103842;103843;103844;103845;103846;103847 103841 8 FAEASEEAVSVQRSMQETVNK Unmodified 2339.1063 0.10633893 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 72.215 67.655 3 0.00043249 85920 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 57.009 49.112 23510000 0 19632000 3878000 0 0 0 0 0 0 0 0 0 0 0 0 15628 1286 14241 130414;130415 103848;103849;103850 103848 3 FAECLEK Unmodified 895.41095 0.41095378 3279 Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 31.533 31.669 2 0.035807 33234 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 70.67 39.611 71432000 0 0 0 5487600 7290600 9181100 6057600 5049700 5448300 0 9329600 0 6073200 7271800 10242000 15629 3279 14242 130416;130417;130418;130419;130420;130421;130422;130423;130424;130425 103851 103851 1 FAEEQLLK Unmodified 976.52295 0.52294707 2773 Q5T3I0 GPATCH4 G patch domain-containing protein 4 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 55.032 55.112 2 0.016731 62232 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 66.799 18.039 73858000 0 0 0 4645900 5116000 5936700 7786100 0 5624500 8813800 9120700 0 8225500 6118800 12470000 15630 2773 14243 130426;130427;130428;130429;130430;130431;130432;130433;130434;130435 103852;103853;103854 103854 3 FAEFDQIMK Oxidation (M) 1143.527 0.52704617 5014 Q9UM54 MYO6 Unconventional myosin-VI yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 62.502 57.164 2 0.012897 73295 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.642 71.008 45054000 0 45054000 0 0 0 0 0 0 0 0 0 0 0 0 0 15631 5014 14244 130436;130437 103855 103855 6354 1 FAEFDQIMK Unmodified 1127.5321 0.53213155 5014 Q9UM54 MYO6 Unconventional myosin-VI yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By matching By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 75.576 74.971 2 0.0094872 93400 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.181 42.786 114190000 0 97171000 0 0 1381600 3325000 1526000 0 0 2945800 0 3155800 0 0 4688300 15632 5014 14244 130438;130439;130440;130441;130442;130443;130444 103856;103857 103856 2 FAEFQYLQPGPPR Unmodified 1548.7725 0.77251325 3308 Q8N163 CCAR2 Cell cycle and apoptosis regulator protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.987 79.044 2 1.3393E-19 91013 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 192.26 179.14 224190000 0 0 0 7842900 10169000 16914000 12516000 14249000 12311000 23189000 21349000 28172000 16088000 19520000 41866000 15633 3308 14245 130445;130446;130447;130448;130449;130450;130451;130452;130453;130454;130455;130456 103858;103859;103860;103861;103862;103863;103864;103865;103866;103867;103868;103869 103861 12 FAEFQYLQPGPPRR Unmodified 1704.8736 0.87362428 3308 Q8N163 CCAR2 Cell cycle and apoptosis regulator protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 72.443 72.629 3 0.00014009 83313 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 70.563 59.619 66076000 0 0 0 0 0 11742000 4217100 0 8345500 0 0 15096000 8048200 0 18628000 15634 3308 14246 130457;130458;130459;130460;130461;130462 103870;103871;103872;103873;103874;103875 103873 6 FAEGITK Unmodified 764.40685 0.40685468 1451 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes yes 0 0 0 By MS/MS 3 0 1 1 29.827 25.482 2 0.040529 31974 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 80.462 17.315 12323000 0 12323000 0 0 0 0 0 0 0 0 0 0 0 0 0 15635 1451 14247 130463 103876 103876 1 FAEHGETLAMK Unmodified 1232.586 0.58595803 4226;2895 Q6N069;Q9BXJ9 NAA16;NAA15 N-alpha-acetyltransferase 16, NatA auxiliary subunit;N-alpha-acetyltransferase 15, NatA auxiliary subunit no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.61 2.99 4 1 23 1 2 2 2 2 3 3 1 2 3 2 2 3 36.982 36.271 2;3 4.0101E-27 39414 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 185.6 160.82 8080000000 34575000 303340000 439850000 38088000 77476000 89564000 470170000 111770000 550580000 1330200000 1838100000 2755700000 0 0 40534000 15636 2895;4226 14248 130464;130465;130466;130467;130468;130469;130470;130471;130472;130473;130474;130475;130476;130477;130478;130479;130480;130481;130482;130483;130484;130485;130486;130487;130488;130489;130490;130491 103877;103878;103879;103880;103881;103882;103883;103884;103885;103886;103887;103888;103889;103890;103891;103892;103893;103894;103895;103896;103897 103894 11 FAEHGETLAMK Oxidation (M) 1248.5809 0.58087266 4226;2895 Q6N069;Q9BXJ9 NAA16;NAA15 N-alpha-acetyltransferase 16, NatA auxiliary subunit;N-alpha-acetyltransferase 15, NatA auxiliary subunit no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.65 2.94 3 1 19 1 3 2 2 1 2 1 2 1 2 2 1 1 2 24.124 23.488 2;3 4.5139E-16 23903 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 159.79 133.69 3299200000 23129000 274650000 0 24898000 36165000 5591200 240650000 38850000 206330000 98326000 768050000 1542900000 9998600 6761700 22838000 15637 2895;4226 14248 130492;130493;130494;130495;130496;130497;130498;130499;130500;130501;130502;130503;130504;130505;130506;130507;130508;130509;130510;130511;130512;130513;130514 103898;103899;103900;103901;103902;103903;103904;103905;103906;103907;103908;103909;103910 103907 4528 3 FAELAQIYAQR Unmodified 1308.6826 0.68263561 4573 Q9NQR4 NIT2 Omega-amidase NIT2 yes yes 0 0 0 By MS/MS 10 0 1 1 73.692 74.031 2 0.00064815 84843 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.649 77.138 9009800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9009800 15638 4573 14249 130515 103911 103911 1 FAELRSPNEFK Unmodified 1336.6776 0.67755023 3910 Q96KP4 CNDP2 Cytosolic non-specific dipeptidase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 6 2 2 2 58.624 52.637 2;3 1.835E-44 71659 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 211.64 167.29 826920000 677100000 106820000 42997000 0 0 0 0 0 0 0 0 0 0 0 0 15639 3910 14250 130516;130517;130518;130519;130520;130521 103912;103913;103914;103915 103913 3 FAEMEER Unmodified 910.38547 0.38546731 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.827 25.03 2 0.04888 26155 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 64.757 55.287 136730000 0 0 0 12170000 7490400 12328000 8146800 8461100 5835700 11050000 11888000 15087000 16895000 8521100 18853000 15640 2451 14251 130522;130523;130524;130525;130526;130527;130528;130529;130530;130531;130532;130533 103916;103917 103917 2 FAEMEER Oxidation (M) 926.38038 0.38038194 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.189 12.337 2 0.041437 10872 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 53.351 44.111 56058000 0 0 0 3126500 3338500 6832500 4932300 3928900 3303800 4650800 4539300 5388500 7064300 3549800 5402800 15641 2451 14251 130534;130535;130536;130537;130538;130539;130540;130541;130542;130543;130544;130545 103918 103918 1 FAENDVIGCFADFECGNDVELSFTK Unmodified 2883.2368 0.23676075 4162 Q9BUJ2 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2.67 0.471 1 2 2 1 97.263 92.29 3 7.5227E-22 115708 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.71 87.302 17310000 13484000 3826000 0 0 0 0 0 0 0 0 0 0 0 0 0 15642 4162 14252 130546;130547;130548 103919;103920 103920 2 FAENRANGQSK Unmodified 1220.5898 0.58979786 3357 Q8N684 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 yes yes 0 0 1 By MS/MS By matching 2 0 2 1 1 6.9581 4.0918 2 0.0011965 7245 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.344 64.107 133690000 117010000 0 16677000 0 0 0 0 0 0 0 0 0 0 0 0 15643 3357 14253 130549;130550 103921 103921 0 FAEQTLR Unmodified 863.45012 0.45011648 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.842 28.04 2 0.026498 30566 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 78.616 29.557 138620000 0 0 0 15064000 9903500 9273500 9451100 9884400 9214700 11346000 12697000 16196000 11501000 11169000 12916000 15644 2501 14254 130551;130552;130553;130554;130555;130556;130557;130558;130559;130560;130561;130562 103922;103923;103924;103925 103925 4 FAESTEISELSHNFVMVNLEDEEEPKDEDFSPDGGYIPR Oxidation (M) 4486.9911 0.99110056 704 O95881 TXNDC12 Thioredoxin domain-containing protein 12 yes yes 0 1 1 By MS/MS 2 0 1 1 95.543 87.412 4 2.4373E-18 112980 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.376 50.774 19155000 19155000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15645 704 14255 130563 103926 103926 848 1 FAETQPK Unmodified 819.41267 0.41266834 1211 P26641 EEF1G Elongation factor 1-gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.803 12.959 2 0.023412 11120 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 86.512 68.951 1446500000 0 0 0 76655000 61374000 198320000 97412000 79001000 74998000 150440000 170450000 107830000 133880000 140000000 156130000 15646 1211 14256 130564;130565;130566;130567;130568;130569;130570;130571;130572;130573;130574;130575 103927;103928;103929 103929 3 FAEVECLAESHQHLSK Unmodified 1883.8836 0.88359662 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 51.817 52.015 3 0.0038057 59219 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 59.634 54.924 48280000 0 0 0 0 0 8109500 5587500 6970400 0 8907500 13882000 0 4823900 0 0 15647 2451 14257 130576;130577;130578;130579;130580;130581 103930;103931;103932 103931 1 FAEVTQEVEVARPVDK Unmodified 1815.9367 0.93667805 2072 Q02241 KIF23 Kinesin-like protein KIF23 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 59.848 59.898 3 7.1215E-20 68305 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 98.507 81.978 199130000 0 0 0 10454000 13309000 22748000 17868000 19384000 14298000 26261000 23819000 33717000 0 17269000 0 15648 2072 14258 130582;130583;130584;130585;130586;130587;130588;130589;130590;130591 103933;103934;103935;103936;103937;103938;103939;103940;103941;103942;103943;103944 103935 12 FAEYGEIK Unmodified 955.4651 0.46509784 5248 Q9Y5S9 RBM8A RNA-binding protein 8A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 42.96 41.742 2 0.014218 53680 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.19 64.125 1057000000 51379000 534970000 39236000 20752000 31156000 32117000 26320000 21126000 24508000 50039000 86831000 89994000 48609000 0 0 15649 5248 14259 130592;130593;130594;130595;130596;130597;130598;130599;130600;130601;130602;130603;130604 103945;103946;103947;103948 103945 4 FAFADAPNHYK Unmodified 1279.5986 0.59857163 3539 Q8WUA7 TBC1D22A TBC1 domain family member 22A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 58.278 52.295 3 0.0069451 67867 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 57.174 46.865 48626000 26224000 16186000 6216200 0 0 0 0 0 0 0 0 0 0 0 0 15650 3539 14260 130605;130606;130607 103949;103950;103951 103949 2 FAFDYATK Unmodified 961.45453 0.45453316 374 O43837 IDH3B Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 65.835 59.844 2 0.016257 76883 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.47 69.541 51161000 5230800 41069000 4861300 0 0 0 0 0 0 0 0 0 0 0 0 15651 374 14261 130608;130609;130610 103952 103952 1 FAFQAEVNR Unmodified 1080.5352 0.53524309 1002 P14625 HSP90B1 Endoplasmin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.59 3.05 3 14 1 1 1 1 1 1 1 1 1 1 1 2 2 1 1 58.115 57.122 2 7.721E-29 64714 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 183.24 170.19 1001000000 88710000 69791000 4344400 26382000 40607000 91683000 60859000 0 45361000 74281000 81924000 105160000 65130000 68869000 177920000 15652 1002 14262 130611;130612;130613;130614;130615;130616;130617;130618;130619;130620;130621;130622;130623;130624;130625;130626;130627 103953;103954;103955;103956;103957;103958;103959;103960;103961;103962;103963;103964;103965;103966;103967;103968;103969 103954 16 FAFVEFADQNSVPR Unmodified 1625.7838 0.78380622 3583 Q8WXA9 SREK1 Splicing regulatory glutamine/lysine-rich protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 83.871 84.007 2 0.00027035 97321 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 101.39 92.059 73096000 0 0 0 0 0 5647000 0 6298400 5756600 11364000 7616800 12060000 4463600 7132300 12756000 15653 3583 14263 130628;130629;130630;130631;130632;130633;130634;130635;130636;130637 103970;103971;103972;103973;103974;103975;103976;103977;103978;103979;103980 103976 11 FAGGLHFSGPK Unmodified 1116.5716 0.5716286 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 6 1 1 1 1 1 1 51.627 51.737 2 0.0075505 58718 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 53.751 35.903 53979000 0 0 0 4310900 0 0 6908800 9871300 6433500 0 0 0 0 7508200 18946000 15654 2172 14264 130638;130639;130640;130641;130642;130643 103981;103982 103981 2 FAGHSEAGGGSGDR Unmodified 1303.5541 0.55414063 714 O96013 PAK4 Serine/threonine-protein kinase PAK 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.616 6.7402 3 1.878E-16 4109 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.35 104.31 82110000 0 0 0 5988600 3251400 6548300 6379100 4892200 3978900 9848900 7957700 8384900 7758900 4685000 12437000 15655 714 14265 130644;130645;130646;130647;130648;130649;130650;130651;130652;130653;130654;130655 103983;103984;103985;103986;103987;103988;103989;103990;103991;103992;103993;103994 103986 11 FAGLDTNQR Unmodified 1020.4989 0.49885759 602 O94913 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.868 37.049 2 0.0061887 40937 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 75.738 51.97 102600000 0 0 0 6925400 6332600 6706300 6160800 7420100 5964700 8522300 8386500 13587000 13273000 6740500 12581000 15656 602 14266 130656;130657;130658;130659;130660;130661;130662;130663;130664;130665;130666;130667 103995;103996;103997;103998;103999;104000;104001;104002;104003 103999 7 FAGNPWYYGK Unmodified 1201.5556 0.55564418 1035 P16333 NCK1 Cytoplasmic protein NCK1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 70.999 65.087 2 0.025506 86318 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.095 72.376 74313000 60987000 8554700 4771200 0 0 0 0 0 0 0 0 0 0 0 0 15657 1035 14267 130668;130669;130670 104004 104004 0 FAGQMGIQLFETSAK Oxidation (M) 1642.8025 0.80249275 2512 Q15286 RAB35 Ras-related protein Rab-35 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 78.921 78.291 2 1.7878E-49 90772 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 167.11 155.8 281540000 10988000 0 0 8938700 14649000 21424000 18740000 24072000 18867000 34441000 31005000 38365000 21624000 0 38429000 15658 2512 14268 130671;130672;130673;130674;130675;130676;130677;130678;130679;130680;130681;130682 104005;104006;104007;104008;104009;104010;104011;104012;104013;104014;104015;104016 104014 4130 12 FAGQMGIQLFETSAK Unmodified 1626.8076 0.80757813 2512 Q15286 RAB35 Ras-related protein Rab-35 yes yes 0 0 0 By MS/MS 2 0 1 1 90.781 82.651 2 0.02033 107328 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.463 41.459 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15659 2512 14268 130683 104017 104017 1 FAGSAGWEGTESLK Unmodified 1438.6729 0.67285879 2236 Q13123 IK Protein Red yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.582 60.687 2 3.4165E-22 69241 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 145.91 130.77 85961000 0 0 0 2637600 3847200 5968800 4608900 4570200 5250500 8684900 10474000 8730900 6982500 7192300 17013000 15660 2236 14269 130684;130685;130686;130687;130688;130689;130690;130691;130692;130693;130694;130695 104018;104019;104020;104021;104022;104023;104024;104025;104026;104027;104028;104029;104030;104031 104019 14 FAGVDIR Unmodified 776.41809 0.41808807 1879 P62249 RPS16 40S ribosomal protein S16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.09 49.248 2 0.024216 54279 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.793 36.184 380110000 0 0 0 20888000 29735000 24340000 19591000 26180000 17882000 28838000 35958000 55284000 47403000 32987000 41023000 15661 1879 14270 130696;130697;130698;130699;130700;130701;130702;130703;130704;130705;130706;130707 104032;104033 104032 2 FAHEHEEMK Oxidation (M) 1172.4921 0.49205765 1534 P48163 ME1 NADP-dependent malic enzyme yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 5.726 5.2594 3 0.015052 3595 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 41.427 30.619 302030000 115890000 0 143750000 0 0 0 0 2778000 1791700 0 5685600 8388900 3952300 6027100 13773000 15662 1534 14271 130708;130709;130710;130711;130712;130713;130714;130715;130716 104034;104035;104036 104036 2436 2 FAHEHEEMK Unmodified 1156.4971 0.49714303 1534 P48163 ME1 NADP-dependent malic enzyme yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 1 2 11.192 8.3796 3 0.027066 10609 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 57.55 57.55 63013000 42411000 0 20602000 0 0 0 0 0 0 0 0 0 0 0 0 15663 1534 14271 130717;130718;130719 104037;104038 104038 1 FAIGSAREADPALNVETEIEILK Unmodified 2485.3064 0.30641894 715 O96017 CHEK2 Serine/threonine-protein kinase Chk2 yes yes 0 0 1 By MS/MS 2 0 1 1 96.103 87.973 3 1.2152E-06 113707 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.413 59.966 20879000 20879000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15664 715 14272 130720 104039 104039 1 FAIGSQVSEHSIIK Unmodified 1514.8093 0.80929269 1333 P33992 MCM5 DNA replication licensing factor MCM5 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 65.604 65.744 3 0.00023009 74485 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.456 63.317 80720000 0 0 0 2326700 0 9667200 0 5377800 6139500 6610600 10200000 10581000 0 6060700 23757000 15665 1333 14273 130721;130722;130723;130724;130725;130726;130727;130728;130729 104040;104041 104040 2 FAIQDISVEETSAK Unmodified 1536.7672 0.7671531 356;971;1359 O43707;P12814;P35609 ACTN4;ACTN1;ACTN2 Alpha-actinin-4;Alpha-actinin-1;Alpha-actinin-2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.612 74.677 2 1.1745E-07 85524 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 115.33 105.99 279530000 0 0 0 6637100 6543900 19733000 12583000 14298000 5643900 15974000 37707000 41782000 10907000 25301000 82424000 15666 356;971;1359 14274 130730;130731;130732;130733;130734;130735;130736;130737;130738;130739;130740;130741 104042;104043;104044;104045;104046;104047;104048;104049;104050;104051;104052;104053;104054 104046 12 FAIVMMGR Oxidation (M) 939.46703 0.46702887 3702 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By matching 10 0 5 1 1 1 1 1 63.417 63.582 2 0.020148 72449 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 55.441 45.256 17615000 0 0 0 0 0 3830600 3352500 2573500 0 0 4407300 0 0 3451000 0 15667 3702 14275 130742;130743;130744;130745;130746 104055;104056 104056 5276;5277 2 FAIVMMGR 2 Oxidation (M) 955.46194 0.4619435 3702 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 43.582 43.882 2 0.005829 49068 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 64.803 34.191 136340000 0 0 0 0 0 0 22185000 19261000 11639000 17717000 20145000 27567000 17824000 0 0 15668 3702 14275 130747;130748;130749;130750;130751;130752;130753;130754;130755 104057;104058;104059;104060;104061;104062;104063;104064;104065 104058 5276;5277 9 FAIVMMGR Unmodified 923.47211 0.47211425 3702 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 75.098 75.257 2 0.030317 86800 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 55.604 35.083 39794000 0 0 0 0 0 3306900 2746200 4109400 2592400 3816600 0 8076200 0 3459700 11686000 15669 3702 14275 130756;130757;130758;130759;130760;130761;130762;130763 104066;104067 104066 2 FALACNASDK Unmodified 1095.5019 0.50189405 1348 P35250 RFC2 Replication factor C subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.022 37.202 2 0.0016398 41481 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 104.2 91.994 353390000 0 0 0 17639000 21103000 19740000 17823000 22900000 20955000 32598000 38680000 46359000 31457000 34799000 49333000 15670 1348 14276 130764;130765;130766;130767;130768;130769;130770;130771;130772;130773;130774;130775 104068;104069;104070;104071;104072 104068 4 FALDMAR Unmodified 822.40581 0.40580882 2284 Q13418 ILK Integrin-linked protein kinase yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 57.207 57.324 2 0.023412 63933 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.512 37.752 160930000 0 0 0 10437000 9214000 17174000 9959500 12459000 7625300 0 20985000 21986000 11362000 13036000 26687000 15671 2284 14277 130776;130777;130778;130779;130780;130781;130782;130783;130784;130785;130786 104073;104074;104075;104076 104073 4 FALENFTVSAAK Unmodified 1296.6714 0.67140222 3858 Q96GN5 CDCA7L Cell division cycle-associated 7-like protein yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 79.222 79.242 2 0.0013151 91706 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 68.893 51.267 31649000 0 0 0 2381500 1334900 2765300 0 0 0 3618500 4080800 5094500 2745500 4132700 5495400 15672 3858 14278 130787;130788;130789;130790;130791;130792;130793;130794;130795 104077;104078;104079;104080;104081 104081 5 FALEVAAK Unmodified 847.48035 0.48035398 1771 P55786;A6NEC2 NPEPPS;NPEPPSL1 Puromycin-sensitive aminopeptidase;Puromycin-sensitive aminopeptidase-like protein yes no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 3 6 1 1 1 1 1 1 1 1 1 57.699 55.954 2 0.035816 61957 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.268 18.911 462420000 60064000 312510000 52365000 0 0 0 0 1973000 0 0 6607800 5339300 1861600 5142200 16548000 15673 1771 14279 130796;130797;130798;130799;130800;130801;130802;130803;130804 104082;104083 104083 2 FALEVPGLR Unmodified 1000.5706 0.57056597 4727 Q9NXH9 TRMT1 tRNA (guanine(26)-N(2))-dimethyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 83.3 83.434 2 0.0031591 96109 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 92.47 81.249 93278000 0 0 0 0 0 3981500 2361000 3587800 0 8640400 10637000 14954000 8377300 13925000 26814000 15674 4727 14280 130805;130806;130807;130808;130809;130810;130811;130812;130813 104084;104085;104086;104087;104088;104089;104090;104091 104086 8 FALGIFAINEAVESGDVGK Unmodified 1935.9942 0.99419293 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS 2 0 1 1 98.904 90.774 2 2.3397E-31 117033 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 125.61 94.784 52604000 52604000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15675 1518 14281 130814 104092 104092 1 FALGSVVAVTK Unmodified 1090.6386 0.63864553 2062 Q01780 EXOSC10 Exosome component 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 77.224 76.645 2 0.002544 88753 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 67.207 35.903 54238000 16480000 0 0 0 1499600 3314500 2505400 2284000 2282000 4307900 4431100 4814400 3545900 3352500 5420300 15676 2062 14282 130815;130816;130817;130818;130819;130820;130821;130822;130823;130824;130825;130826 104093;104094;104095;104096;104097;104098;104099;104100;104101;104102;104103 104093 10 FALNSLLQR Unmodified 1060.6029 0.60292873 1406 P39880 CUX1 Homeobox protein cut-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 81.535 81.689 2 0.0050696 94131 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.568 50.565 26707000 0 0 0 0 0 4108400 2996600 3450200 4134700 0 0 0 0 0 12017000 15677 1406 14283 130827;130828;130829;130830;130831 104104;104105;104106;104107;104108 104106 5 FALPQYLK Unmodified 978.55385 0.55385327 60 CON__P02663 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.114 78.174 2 0.0065503 90291 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 99.919 84.48 + 561790000 0 0 0 44524000 65848000 113070000 73671000 40446000 29042000 32911000 44891000 45217000 28622000 19840000 23707000 15678 60 14284 130832;130833;130834;130835;130836;130837;130838;130839;130840;130841;130842;130843 104109;104110;104111;104112;104113;104114;104115;104116;104117;104118;104119;104120 104109 10 FALPYIR Unmodified 878.50142 0.50142377 816 P06132 UROD Uroporphyrinogen decarboxylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 79.624 79.819 2 0.024599 91876 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 97.64 23.043 18570000 0 0 0 0 0 0 0 0 0 0 2903800 3182900 0 0 12483000 15679 816 14285 130844;130845;130846 104121 104121 1 FALTVVR Unmodified 804.48577 0.48577371 4560 Q9NQ88 TIGAR Fructose-2,6-bisphosphatase TIGAR yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 63.716 63.983 2 0.030762 73145 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 74.439 45.91 45147000 0 0 0 0 0 8514000 4362100 0 0 4859300 7515100 7834200 0 0 12063000 15680 4560 14286 130847;130848;130849;130850;130851;130852 104122;104123 104122 2 FALVAPVQAEEDSGNVNGK Unmodified 1943.9589 0.95887005 717 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 yes yes 0 0 0 By MS/MS 3 0 1 1 78.053 74.634 2 0.038975 89626 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 30.828 24.724 1467300 0 1467300 0 0 0 0 0 0 0 0 0 0 0 0 0 15681 717 14287 130853 104124 104124 1 FALVTPK Unmodified 774.46398 0.46397563 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 54.392 54.528 2 0.028147 60731 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.847 16.553 104460000 0 0 0 6298400 6995900 8448300 8839000 7625500 6504500 7615600 9460300 11718000 9726700 7635800 13589000 15682 1601 14288 130854;130855;130856;130857;130858;130859;130860;130861;130862;130863;130864;130865 104125;104126 104126 2 FAMEPEEFDSDTLR Unmodified 1685.7243 0.72430201 982 P13667 PDIA4 Protein disulfide-isomerase A4 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 78.362 78.528 2 2.451E-26 90343 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 152.07 142.88 26870000 0 0 0 0 0 0 0 2542200 0 0 3568100 0 1951400 3676700 15132000 15683 982 14289 130866;130867;130868;130869;130870 104127;104128;104129 104127 3 FAMEPEEFDSDTLR Oxidation (M) 1701.7192 0.71921663 982 P13667 PDIA4 Protein disulfide-isomerase A4 yes yes 0 1 0 By MS/MS 10 0 1 1 65.761 66.298 2 0.0046259 75300 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.274 50.387 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15684 982 14289 130871 104130 104130 1321 1 FAMEPEEFDSDTLREFVTAFK Unmodified 2508.1519 0.15189213 982 P13667 PDIA4 Protein disulfide-isomerase A4 yes yes 0 0 1 By MS/MS By MS/MS 2.25 0.433 3 1 2 2 99.367 93.286 2;3 1.7464E-36 117854 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 126.63 113.76 155600000 132510000 23089000 0 0 0 0 0 0 0 0 0 0 0 0 0 15685 982 14290 130872;130873;130874;130875 104131;104132;104133 104133 3 FAMEPEEFDSDTLREFVTAFK Oxidation (M) 2524.1468 0.14680676 982 P13667 PDIA4 Protein disulfide-isomerase A4 yes yes 0 1 1 By MS/MS 2 0 1 1 98.329 90.198 3 6.0691E-30 116355 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 116.65 113.25 125600000 125600000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15686 982 14290 130876 104134 104134 1321 1 FAMPSSTPLYHDAIK Unmodified 1676.8232 0.82322819 165 O00512 BCL9 B-cell CLL/lymphoma 9 protein yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 74.977 73.883 3 0.00086709 85006 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.168 43.866 83423000 48466000 0 0 0 2852800 0 0 0 3667900 4334300 0 0 3146100 4663600 16292000 15687 165 14291 130877;130878;130879;130880;130881;130882;130883 104135;104136;104137;104138;104139;104140 104136 6 FAMVAPDVQIEDGK Oxidation (M) 1534.7337 0.73374448 4857 Q9UBT2 UBA2 SUMO-activating enzyme subunit 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 5.4 3.77 2 1 2 2 1 1 1 67.234 64.57 2 1.1167E-14 81802 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.4 111.02 465260000 0 430460000 5003800 0 0 0 0 0 0 0 12133000 0 0 0 17672000 15688 4857 14292 130884;130885;130886;130887;130888 104141;104142;104143;104144;104145;104146;104147 104142 6216 6 FAMVAPDVQIEDGK Unmodified 1518.7388 0.73882986 4857 Q9UBT2 UBA2 SUMO-activating enzyme subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 3 1 80.399 75.707 2 1.3957E-10 94422 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 141.08 126.66 2529400000 42179000 2480100000 7157300 0 0 0 0 0 0 0 0 0 0 0 0 15689 4857 14292 130889;130890;130891;130892;130893 104148;104149;104150;104151;104152;104153 104148 5 FANHVSGTLETALGK Unmodified 1543.7995 0.79945628 400 O60443 DFNA5 Non-syndromic hearing impairment protein 5 yes yes 0 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 2 2 71.266 65.085 2;3 0.00083866 83810 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 43.861 35.262 246180000 89456000 156730000 0 0 0 0 0 0 0 0 0 0 0 0 0 15690 400 14293 130894;130895;130896;130897 104154;104155;104156;104157 104154 1 FANLTPSR Unmodified 904.47667 0.47666558 242 O15027 SEC16A Protein transport protein Sec16A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 37.967 37.359 2 0.0075833 41441 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 89.142 62.18 150890000 17819000 0 0 0 0 0 0 0 16189000 22563000 22127000 28115000 0 20210000 23868000 15691 242 14294 130898;130899;130900;130901;130902;130903;130904 104158;104159;104160;104161;104162;104163;104164 104160 6 FANSFIPK Unmodified 922.49125 0.49125301 2805 Q5VIR6 VPS53 Vacuolar protein sorting-associated protein 53 homolog yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 68.006 60.901 2 0.020387 80967 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.813 50.007 79563000 43277000 36286000 0 0 0 0 0 0 0 0 0 0 0 0 0 15692 2805 14295 130905;130906 104165 104165 1 FANYIDK Unmodified 869.42832 0.42831841 870 P08670 VIM Vimentin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.761 36.942 2 0.023899 41080 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 94.262 60.409 5963600000 0 0 0 382590000 375690000 530280000 389570000 373070000 299950000 584030000 484320000 780110000 642830000 425680000 695460000 15693 870 14296 130907;130908;130909;130910;130911;130912;130913;130914;130915;130916;130917;130918 104166;104167;104168 104166 3 FAPDISSYVLSDDIK Unmodified 1668.8247 0.82466798 3713 Q969F9 HPS3 Hermansky-Pudlak syndrome 3 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 85.857 85.913 2 0.003668 99387 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 55.452 40.762 12400000 0 0 0 0 3019900 0 2097600 0 4497300 0 0 0 2784700 0 0 15694 3713 14297 130919;130920;130921;130922 104169;104170;104171 104169 3 FAPFEIK Unmodified 850.45889 0.45889025 2234 Q13111 CHAF1A Chromatin assembly factor 1 subunit A yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 76.942 72.605 2 0.032088 90599 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.866 44.148 71462000 189390 71272000 0 0 0 0 0 0 0 0 0 0 0 0 0 15695 2234 14298 130923;130924 104172 104172 1 FAPNLITVK Unmodified 1001.591 0.59096706 5228 Q9Y5B0 CTDP1 RNA polymerase II subunit A C-terminal domain phosphatase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 75.388 70.047 2 0.0093239 85971 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 87.639 67.119 132170000 75205000 47893000 9068800 0 0 0 0 0 0 0 0 0 0 0 0 15696 5228 14299 130925;130926;130927 104173;104174;104175 104175 3 FAPTVSDLLK Unmodified 1089.607 0.60701105 3517 Q8TEQ0;Q8IUI4 SNX29;SNX29P2 Sorting nexin-29;Putative protein SNX29P2 yes no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 79.462 79.596 2 0.0056999 91630 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.897 46.597 157230000 0 0 0 0 0 12185000 0 22023000 0 2568300 25295000 27691000 21420000 18730000 27321000 15697 3517 14300 130928;130929;130930;130931;130932;130933;130934;130935 104176;104177;104178;104179;104180;104181;104182 104177 6 FAPVVAPK Unmodified 827.49052 0.49052473 3706 Q93052 LPP Lipoma-preferred partner yes yes 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.397 43.572 2 0.033696 47513 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.554 27.075 374180000 0 0 0 14172000 11385000 15180000 20803000 22840000 19466000 34843000 48778000 50709000 16989000 41279000 77739000 15698 3706 14301 130936;130937;130938;130939;130940;130941;130942;130943;130944;130945;130946;130947 104183 104183 1 FAPYKPQDILLK Unmodified 1431.8126 0.81258715 4288 Q9C0D5 TANC1 Protein TANC1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.786 74.849 3 0.0041348 86371 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 51.979 44.223 81797000 0 0 0 2575700 2886400 10834000 3651500 6864600 7087600 6677700 6732500 9773300 5718900 5007700 13987000 15699 4288 14302 130948;130949;130950;130951;130952;130953;130954;130955;130956;130957;130958;130959 104184;104185;104186;104187 104185 4 FAQALGLTEAVK Unmodified 1246.6921 0.69213767 1977 P78347 GTF2I General transcription factor II-I yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.39 3.7 5 1 12 1 4 1 1 1 1 1 1 1 1 1 1 1 1 1 72.524 71.146 2 5.4717E-09 89569 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.09 81.068 4975200000 256250000 2321000000 112830000 116230000 148510000 230050000 149380000 125250000 115080000 251740000 185560000 230530000 233520000 202350000 296970000 15700 1977 14303 130960;130961;130962;130963;130964;130965;130966;130967;130968;130969;130970;130971;130972;130973;130974;130975;130976;130977 104188;104189;104190;104191;104192;104193;104194;104195;104196;104197;104198;104199;104200;104201;104202;104203;104204;104205;104206;104207;104208;104209;104210;104211 104194 24 FAQDVSQDDLIR Unmodified 1405.6838 0.68375782 3862 Q96H20 SNF8 Vacuolar-sorting protein SNF8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 60.265 59.908 2 2.7703E-08 67672 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 132.32 106.43 171840000 0 47745000 0 5837800 6048200 13297000 9421100 9822200 5030800 13485000 12300000 10864000 9983900 8176800 19825000 15701 3862 14304 130978;130979;130980;130981;130982;130983;130984;130985;130986;130987;130988;130989;130990 104212;104213;104214;104215;104216;104217;104218;104219;104220;104221;104222;104223;104224 104216 13 FAQDVSQDDLIRAIK Unmodified 1717.8999 0.89989861 3862 Q96H20 SNF8 Vacuolar-sorting protein SNF8 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 78.896 74.158 3 3.3282E-23 93226 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.943 82.057 119510000 12830000 77721000 28963000 0 0 0 0 0 0 0 0 0 0 0 0 15702 3862 14305 130991;130992;130993;130994 104225;104226;104227;104228;104229;104230 104225 6 FAQHGTFEYEYSQR Unmodified 1761.7747 0.7746981 1151 P23246 SFPQ Splicing factor, proline- and glutamine-rich yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 47.98 48.288 3 0.010393 53180 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.96 32.9 153730000 0 0 0 0 0 8847300 6511500 8653300 11232000 13059000 13128000 22938000 14091000 11562000 43704000 15703 1151 14306 130995;130996;130997;130998;130999;131000;131001;131002;131003;131004 104231;104232 104231 2 FAQIIQEK Unmodified 975.53893 0.53893149 4077 Q99996 AKAP9 A-kinase anchor protein 9 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 51.025 44.191 2 0.012959 57665 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.523 35.865 91674000 3840300 87834000 0 0 0 0 0 0 0 0 0 0 0 0 0 15704 4077 14307 131005;131006 104233 104233 1 FAQLALER Unmodified 946.52362 0.52361577 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 56.461 56.777 2 0.0096391 64841 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 82.241 32.799 112230000 0 0 0 0 0 16587000 0 13172000 0 14096000 16203000 20346000 15817000 0 16010000 15705 619 14308 131007;131008;131009;131010;131011;131012;131013 104234;104235;104236 104235 3 FAQLEAENSILK Unmodified 1361.7191 0.7190807 4077 Q99996 AKAP9 A-kinase anchor protein 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 2 1 1 72.797 72.308 2 1.2823E-05 90671 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.47 84.852 122820000 0 62666000 2436400 3518600 4239100 6536600 2804300 0 3641100 5411900 4827700 8129400 7176300 4060800 7376500 15706 4077 14309 131014;131015;131016;131017;131018;131019;131020;131021;131022;131023;131024;131025;131026;131027 104237;104238;104239;104240;104241;104242;104243;104244;104245;104246;104247;104248;104249;104250 104240 14 FAQPGSFEYEYAMR Oxidation (M) 1710.7348 0.73480712 2508 Q15233 NONO Non-POU domain-containing octamer-binding protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.452 68.53 2 0.00027802 78398 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 70.942 64.97 405450000 0 0 0 17544000 21164000 32396000 35085000 24141000 24214000 44278000 41592000 56196000 31663000 29044000 48132000 15707 2508 14310 131028;131029;131030;131031;131032;131033;131034;131035;131036;131037;131038;131039 104251;104252;104253;104254;104255;104256;104257;104258;104259;104260;104261;104262;104263 104251 4114 13 FAQPGSFEYEYAMR Unmodified 1694.7399 0.73989249 2508 Q15233 NONO Non-POU domain-containing octamer-binding protein yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 76.225 76.327 2 4.4336E-15 87631 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 143.5 136.77 232070000 0 0 0 0 6240400 15479000 9703000 17382000 0 23309000 26851000 25060000 10668000 22211000 75167000 15708 2508 14310 131040;131041;131042;131043;131044;131045;131046;131047;131048;131049 104264;104265;104266;104267;104268;104269;104270;104271 104266 8 FAQPGTFEFEYASR Unmodified 1648.7522 0.75217174 3589 Q8WXF1 PSPC1 Paraspeckle component 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 77.79 77.973 2 2.4173E-10 90095 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 124.1 91.783 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15709 3589 14311 131050;131051;131052;131053;131054 104272;104273;104274;104275;104276 104272 5 FAQSAPGSPLSSQPVLITVQR Unmodified 2182.1746 0.17461691 2051 Q01167 FOXK2 Forkhead box protein K2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 2 2 2 2 2 2 81.883 81.987 2;3 2.288E-09 94634 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.489 84.875 131870000 0 0 0 0 6528000 11164000 7654000 10866000 9151500 17879000 13498000 14444000 6246500 10249000 24190000 15710 2051 14312 131055;131056;131057;131058;131059;131060;131061;131062;131063;131064;131065;131066;131067;131068;131069;131070;131071;131072;131073;131074;131075;131076 104277;104278;104279;104280;104281;104282;104283;104284;104285;104286;104287;104288;104289 104280 12 FAQSTNLK Unmodified 907.47633 0.47633123 1190;281 P25490;O15391 YY1;YY2 Transcriptional repressor protein YY1;Transcription factor YY2 no no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 21.661 20.858 2 0.0025595 26792 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.65 100.8 941640000 83782000 530130000 7842800 18789000 0 31748000 28149000 19656000 0 0 37668000 51597000 35904000 38204000 58170000 15711 1190;281 14313 131077;131078;131079;131080;131081;131082;131083;131084;131085;131086;131087;131088;131089 104290;104291;104292;104293;104294;104295;104296;104297;104298;104299;104300 104292 7 FAQVVLQDLDK Unmodified 1274.6871 0.68705229 2175 Q0VDF9 HSPA14 Heat shock 70 kDa protein 14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.75 3.85 4 1 7 1 3 1 1 1 1 1 1 1 1 78.638 76.092 2 3.5177E-09 95074 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.16 112.91 357210000 15411000 288690000 26513000 0 0 4069500 0 2846600 0 5313800 0 0 0 0 14366000 15712 2175 14314 131090;131091;131092;131093;131094;131095;131096;131097;131098;131099;131100;131101 104301;104302;104303;104304;104305;104306;104307;104308;104309;104310;104311 104303 11 FAQVVLQDLDKK Unmodified 1402.782 0.78201531 2175 Q0VDF9 HSPA14 Heat shock 70 kDa protein 14 yes yes 0 0 1 By MS/MS 2 0 1 1 77.594 69.464 3 0.034515 91494 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 34.768 28.9 6338000 6338000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15713 2175 14315 131102 104312 104312 1 FAREEIIPVAAEYDK Unmodified 1749.8938 0.8937506 944 P11310 ACADM Medium-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 0 0 1 By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 73.407 72.284 3 0.005111 82957 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 39.685 26.566 71033000 3482300 0 41662000 0 972530 2764700 0 0 0 0 3464200 4187700 1578400 3178500 9742200 15714 944 14316 131103;131104;131105;131106;131107;131108;131109;131110;131111 104313;104314;104315 104314 2 FASDDEHDEHDENGATGPVK Unmodified 2168.8883 0.88828388 811 P05455 SSB Lupus La protein yes yes 0 0 0 By MS/MS By MS/MS By matching 2.17 0.373 5 1 2 3 1 25.164 20.841 3;4 3.375E-05 29226 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.564 59.858 50758000 21794000 26263000 2701000 0 0 0 0 0 0 0 0 0 0 0 0 15715 811 14317 131112;131113;131114;131115;131116;131117 104316;104317;104318;104319;104320;104321 104318 5 FASEAEDK Unmodified 895.39233 0.39232683 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 5 4.1 1 2 2 2 1 1 1 34.386 34.003 2 0.0060247 6667 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 104.37 78.747 444100000 64080000 363300000 0 0 0 0 0 0 0 0 0 0 0 0 16719000 15716 4819 14318 131118;131119;131120;131121;131122 104322;104323;104324;104325 104323 4 FASENDLPEWK Unmodified 1334.6143 0.61428128 1480 P43487 RANBP1 Ran-specific GTPase-activating protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 67.437 67.519 2 5.7803E-16 76848 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 161.63 153.71 496490000 0 0 0 7950300 6567500 11549000 13421000 13153000 9389700 12985000 85323000 71148000 11307000 50656000 203040000 15717 1480 14319 131123;131124;131125;131126;131127;131128;131129;131130;131131;131132;131133;131134;131135 104326;104327;104328;104329;104330;104331;104332;104333;104334;104335;104336;104337 104330 8 FASFIDK Unmodified 826.4225 0.42250475 79;74;66;58;779;67;77;88;69;103;80;96;960;2056;83;53;105;107;91;109;98 CON__P35908v2;P35908;CON__P35908;P04259;CON__Q7Z794;Q7Z794;CON__Q9R0H5;CON__P05787;P05787;CON__Q9H552;CON__P50446;CON__Q8BGZ7;CON__Q01546;CON__Q3SY84;Q3SY84;P12035;CON__P12035;Q01546;CON__P13647;P13647;CON__P19013;P19013;CON__O95678;O95678;CON__P02538;P02538;CON__P04259;CON__Q5XKE5;Q5XKE5;CON__P08729;CON__Q3KNV1;P08729;CON__Q6ISB0;CON__Q9NSB2;Q9NSB2;CON__Q9DCV7 KRT2;KRT6B;KRT77;KRT8;KRT71;KRT3;KRT76;KRT5;KRT4;KRT75;KRT6A;KRT79;KRT7;KRT84 Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 1b;Keratin, type II cytoskeletal 8;Keratin, type II cytoskeletal 71;Keratin, type II cytoskeletal 3;Keratin, type II cytoskeletal 2 oral;Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 4;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 79;Keratin, type II cytoskeletal 7;Keratin, type II cuticular Hb4 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.6 3.01 10 2 55 5 4 3 6 6 4 5 6 4 4 5 5 4 2 4 54.019 53.28 1;2 0.017052 59461 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 114.72 70.11 + 69797000000 2011200000 3033800000 1507300000 8607300000 3774400000 4813500000 3795700000 7187100000 3404400000 5957400000 5566400000 7242000000 6595000000 3308900000 2992700000 15718 79;779;103;109;67;80;105;83;91;960;2056;74;77;53;58;66;96;69;88;98;107 14320 131136;131137;131138;131139;131140;131141;131142;131143;131144;131145;131146;131147;131148;131149;131150;131151;131152;131153;131154;131155;131156;131157;131158;131159;131160;131161;131162;131163;131164;131165;131166;131167;131168;131169;131170;131171;131172;131173;131174;131175;131176;131177;131178;131179;131180;131181;131182;131183;131184;131185;131186;131187;131188;131189;131190;131191;131192;131193;131194;131195;131196;131197;131198;131199;131200;131201;131202 104338;104339;104340;104341;104342;104343;104344;104345;104346;104347;104348;104349;104350;104351;104352;104353;104354;104355;104356;104357;104358;104359;104360;104361;104362;104363;104364;104365;104366;104367;104368;104369;104370;104371;104372;104373;104374;104375;104376;104377;104378;104379;104380;104381;104382;104383;104384;104385;104386;104387;104388;104389;104390;104391;104392;104393;104394;104395;104396;104397;104398;104399;104400;104401;104402;104403;104404;104405;104406;104407;104408;104409;104410 104347 71 FASFNAYENHLK Unmodified 1439.6834 0.68336389 3723 Q969S3 ZNF622 Zinc finger protein 622 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60.034 59.27 3 0.003771 81321 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.165 58.602 166640000 69095000 0 7124300 3856600 4122100 6097300 6171500 7955800 4848300 7050200 13303000 7373900 5619500 6865800 17155000 15719 3723 14321 131203;131204;131205;131206;131207;131208;131209;131210;131211;131212;131213;131214;131215;131216 104411;104412;104413;104414 104412 4 FASGGCDNLIK Unmodified 1180.5547 0.55465791 1769 P55735 SEC13 Protein SEC13 homolog yes yes 0 0 0 By MS/MS 10 0 1 1 42.817 43.572 2 0.031317 48269 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 50.978 34.505 9436900 0 0 0 0 0 0 0 0 0 0 0 9436900 0 0 0 15720 1769 14322 131217 104415 104415 1 FASLEFSPGSK Unmodified 1168.5764 0.57643921 3364 Q8N766 EMC1 ER membrane protein complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 65.837 65.781 2 0.00057517 75407 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 80.755 59.227 22376000 0 0 0 3292700 2231000 1972500 2318100 3753700 0 3618500 0 0 2848900 2340200 0 15721 3364 14323 131218;131219;131220;131221;131222;131223;131224;131225 104416;104417;104418;104419;104420;104421 104418 6 FASNVVEK Unmodified 892.46543 0.46543219 2425;3479 Q14671;Q8TB72 PUM1;PUM2 Pumilio homolog 1;Pumilio homolog 2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 25.109 25.312 2 0.006389 26608 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 101.28 49.712 790520000 0 0 0 41238000 53765000 59292000 58691000 62889000 47624000 68713000 61427000 80493000 80356000 70646000 105380000 15722 2425;3479 14324 131226;131227;131228;131229;131230;131231;131232;131233;131234;131235;131236;131237 104422;104423;104424;104425;104426;104427;104428;104429;104430;104431 104429 10 FASSPLR Unmodified 776.41809 0.41808807 614 O94979 SEC31A Protein transport protein Sec31A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.916 31.105 2 0.023018 34364 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 103.29 31.265 176740000 0 0 0 7038600 9476300 14084000 14055000 11684000 8944600 17636000 16488000 21994000 13514000 14464000 27364000 15723 614 14325 131238;131239;131240;131241;131242;131243;131244;131245;131246;131247;131248;131249 104432;104433;104434;104435;104436;104437;104438;104439;104440;104441 104440 10 FASVFVYK Unmodified 959.51165 0.5116541 3294 Q8IZE3 SCYL3 Protein-associating with the carboxyl-terminal domain of ezrin yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 71.019 69.808 2 0.044485 91813 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.787 42.185 20351000 8249400 0 0 1299300 1144600 0 2213100 0 0 0 2810500 0 2273800 2360600 0 15724 3294 14326 131250;131251;131252;131253;131254;131255;131256 104442;104443 104442 2 FASVLPEYLK Unmodified 1165.6383 0.63831118 3194 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching 6.12 3.89 3 1 4 1 2 1 1 1 1 1 82.668 80.389 2 0.00031982 102243 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 118.5 92.556 214260000 69767000 114720000 19975000 0 0 1600900 0 1263800 0 0 0 0 5726600 1205900 0 15725 3194 14327 131257;131258;131259;131260;131261;131262;131263;131264 104444;104445;104446;104447;104448 104447 4 FASYLTFSPSEVK Unmodified 1474.7344 0.73439641 1749 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 81.869 80.76 2 9.9533E-22 101904 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 146.17 138.25 188860000 46902000 61944000 5593500 0 3474300 7520000 4931400 0 5063800 9236000 8553100 9771000 7187500 7090500 11591000 15726 1749 14328 131265;131266;131267;131268;131269;131270;131271;131272;131273;131274;131275;131276;131277 104449;104450;104451;104452;104453;104454 104452 6 FATCNPSTREQICEVEEGDKPDVDK Unmodified 2923.2964 0.29640089 1527 P47895 ALDH1A3 Aldehyde dehydrogenase family 1 member A3 yes yes 0 0 2 By MS/MS 2 0 1 1 58.707 54.905 4 0.0016081 68582 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 34.04 30.875 15396000 0 0 15396000 0 0 0 0 0 0 0 0 0 0 0 0 15727 1527 14329 131278 104455;104456 104456 2 FATCSDDGTVR Unmodified 1227.519 0.51900068 4293 Q9C0J8 WDR33 pre-mRNA 3' end processing protein WDR33 yes yes 0 0 0 By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 23.133 23.382 2 0.0085147 24398 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 51.445 34.06 33366000 0 0 0 0 1636400 2704800 2190900 2387900 0 2371300 3913600 3766300 3610500 4147300 6637400 15728 4293 14330 131279;131280;131281;131282;131283;131284;131285;131286;131287;131288 104457 104457 1 FATDGEGYKPCDPQVIR Unmodified 1951.9098 0.90981137 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 54.937 55.459 3 0.0013566 62158 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.591 41.901 22011000 0 0 0 0 0 0 0 0 0 0 9566900 0 0 0 12444000 15729 2047 14331 131289;131290 104458;104459;104460 104459 3 FATEAAITILR Unmodified 1204.6816 0.68157298 1067 P17987 TCP1 T-complex protein 1 subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 79.907 80.075 2 0.0025166 92104 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.334 46.432 30115000 0 0 0 0 0 0 0 0 4329800 7313700 0 0 0 0 18471000 15730 1067 14332 131291;131292;131293 104461;104462 104462 2 FATEAAITILRIDDLIK Unmodified 1902.0826 0.082614002 1067 P17987 TCP1 T-complex protein 1 subunit alpha yes yes 0 0 1 By MS/MS By MS/MS By matching 2 0.577 1 4 1 2 3 1 101.05 98.034 3 4.6657E-07 118017 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.666 85.85 79861000 53483000 25011000 1367500 0 0 0 0 0 0 0 0 0 0 0 0 15731 1067 14333 131294;131295;131296;131297;131298;131299 104463;104464;104465;104466;104467 104467 5 FATEFVAHGGVQK Unmodified 1389.7041 0.70409934 5192 Q9Y4B6 VPRBP Protein VPRBP yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 5 3 1 1 55.746 48.89 2;3 6.4348E-20 66650 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 163.88 134.79 181280000 153020000 25160000 3104300 0 0 0 0 0 0 0 0 0 0 0 0 15732 5192 14334 131300;131301;131302;131303;131304 104468;104469;104470;104471;104472 104472 3 FATEYCNTIEGTAK Unmodified 1603.7188 0.7188227 154 O00429 DNM1L Dynamin-1-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.57 3.96 3 4 1 1 1 1 1 1 1 55.669 51.263 2 2.709E-29 65890 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 165.39 148.16 313320000 5506700 296910000 3532100 0 0 0 0 0 0 0 0 0 7379900 0 0 15733 154 14335 131305;131306;131307;131308;131309;131310;131311 104473;104474;104475;104476;104477;104478 104473 6 FATFLQR Unmodified 881.47594 0.4759373 5068 Q9UQ84 EXO1 Exonuclease 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 60.189 60.239 2 0.018568 68717 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 111.69 79.574 92854000 0 0 0 5485300 6115400 8938500 8060000 8586400 8165700 9251300 13358000 14297000 10596000 0 0 15734 5068 14336 131312;131313;131314;131315;131316;131317;131318;131319;131320;131321 104479;104480;104481;104482;104483;104484;104485;104486;104487;104488 104484 9 FATGGQGQDSGK Unmodified 1151.5207 0.52071524 1734 P54198 HIRA Protein HIRA yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 8.6212 8.7549 2 0.037029 7280 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 35.541 29.229 7037800 0 0 0 1007100 0 0 0 1088500 898340 932220 0 0 2075200 1036500 0 15735 1734 14337 131322;131323;131324;131325;131326;131327 104489;104490 104490 2 FATHAAALSVR Unmodified 1142.6196 0.61964142 1151 P23246 SFPQ Splicing factor, proline- and glutamine-rich yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 1 2 2 2 2 2 2 2 2 2 39.147 39.333 2;3 0.00026869 43428 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 91.095 74.584 1100500000 0 0 0 60924000 67985000 64812000 108290000 55739000 48832000 95626000 111950000 155910000 68191000 74317000 187910000 15736 1151 14338 131328;131329;131330;131331;131332;131333;131334;131335;131336;131337;131338;131339;131340;131341;131342;131343;131344;131345;131346;131347;131348;131349;131350 104491;104492;104493;104494;104495;104496;104497;104498;104499;104500;104501 104495 8 FATLYSTR Unmodified 957.49198 0.4919813 605 O94919 ENDOD1 Endonuclease domain-containing 1 protein yes yes 0 0 0 By MS/MS 10 0 1 1 47.103 46.513 2 0.041302 52999 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 78.77 62.476 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15737 605 14339 131351 104502 104502 1 FATNEAIQR Unmodified 1048.5302 0.53015772 242 O15027 SEC16A Protein transport protein Sec16A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.363 31.549 2 1.7924E-05 33075 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 133.6 113.04 236650000 0 0 0 11717000 16735000 20083000 15072000 18993000 13254000 21180000 21495000 31805000 20629000 18661000 27029000 15738 242 14340 131352;131353;131354;131355;131356;131357;131358;131359;131360;131361;131362;131363 104503;104504;104505;104506;104507;104508;104509;104510;104511;104512;104513;104514 104506 8 FATSLVDNSVPLLR Unmodified 1530.8406 0.84059282 2838 Q63HN8 RNF213 E3 ubiquitin-protein ligase RNF213 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 86.055 86.196 2 0.0019607 99598 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.536 54.329 20741000 0 0 0 0 0 2682200 1405000 1786200 1130800 4807500 0 0 0 2849100 6079800 15739 2838 14341 131364;131365;131366;131367;131368;131369;131370;131371 104515;104516;104517;104518 104516 4 FATVEVTDKPVDEALREAMPK Unmodified 2345.1937 0.19369737 4610 Q9NRV9 HEBP1 Heme-binding protein 1 yes yes 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 86.591 80.122 3;4 2.3153E-07 102264 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.644 63.936 48593000 6821600 41771000 0 0 0 0 0 0 0 0 0 0 0 0 0 15740 4610 14342 131372;131373 104519;104520 104520 2 FAVAALQSK Unmodified 933.52837 0.5283668 2835 Q5W0B1 RNF219 RING finger protein 219 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 52.077 52.249 2 0.0052744 59224 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 78.192 29.405 47041000 0 0 0 0 3557200 6967900 4715800 0 0 7071100 6821000 0 4175700 4841100 8890800 15741 2835 14343 131374;131375;131376;131377;131378;131379;131380;131381 104521;104522;104523;104524;104525 104522 5 FAVALDSEQNNIHVK Unmodified 1683.858 0.8580338 136 O00267 SUPT5H Transcription elongation factor SPT5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 63.267 63.429 3 0.00089067 71674 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.643 47.401 120610000 0 0 0 0 4409800 14509000 5588200 0 5091000 12165000 14161000 16544000 10416000 17735000 19992000 15742 136 14344 131382;131383;131384;131385;131386;131387;131388;131389;131390;131391 104526;104527;104528;104529;104530;104531;104532;104533;104534 104531 8 FAVATLPPA Unmodified 885.496 0.49600404 1230 P28072 PSMB6 Proteasome subunit beta type-6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 80.085 74.928 2 0.023642 94385 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.021 45.542 110340000 20742000 85304000 4298000 0 0 0 0 0 0 0 0 0 0 0 0 15743 1230 14345 131392;131393;131394 104535;104536 104535 2 FAVEEIIQK Unmodified 1075.5914 0.59136099 4124 Q9BS40 LXN Latexin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.28 3.23 3 1 14 1 2 1 1 1 1 1 2 1 1 2 1 1 1 1 73.394 72.398 2 0.0033609 83517 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 110.31 70.664 1267500000 83997000 676140000 158290000 12377000 9917600 59979000 15175000 16455000 10445000 35466000 38326000 36221000 15196000 26103000 73392000 15744 4124 14346 131395;131396;131397;131398;131399;131400;131401;131402;131403;131404;131405;131406;131407;131408;131409;131410;131411;131412 104537;104538;104539;104540;104541;104542;104543;104544;104545;104546;104547;104548;104549;104550;104551;104552;104553 104545 17 FAVFGLGNK Unmodified 951.5178 0.51780212 1039 P16435 POR NADPH--cytochrome P450 reductase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.081 76.123 2 0.0051739 87190 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.32 63.626 388120000 0 0 0 28647000 29586000 31772000 39230000 41476000 34204000 0 46946000 0 35519000 38838000 61901000 15745 1039 14347 131413;131414;131415;131416;131417;131418;131419;131420;131421;131422;131423 104554;104555;104556;104557;104558;104559;104560;104561;104562;104563;104564 104556 11 FAVGSGSR Unmodified 779.3926 0.3926016 256 O15143 ARPC1B Actin-related protein 2/3 complex subunit 1B yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS 10 0 5 1 1 1 1 1 18.778 19.211 2 0.00622 18847 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 102.71 48.188 42129000 0 0 0 0 0 0 0 0 0 3222600 12577000 2118400 0 790330 23421000 15746 256 14348 131424;131425;131426;131427;131428 104565;104566 104565 2 FAVLHGEAPR Unmodified 1095.5825 0.58252764 1776 P55884 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 39.749 39.988 2 0.0033866 44614 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 76.679 48.256 100140000 0 0 0 5682600 0 5384700 6879700 9771000 4917400 8496000 8587500 11414000 9344700 7376300 22281000 15747 1776 14349 131429;131430;131431;131432;131433;131434;131435;131436;131437;131438;131439 104567;104568;104569;104570;104571;104572;104573;104574 104571 8 FAVLQTYGDTTHTLVEK Unmodified 1921.9785 0.97854286 1323 P32754 HPD 4-hydroxyphenylpyruvate dioxygenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.83 7 1 13 3 3 2 1 1 1 3 2 1 2 2 77.593 75.678 2;3 3.8736E-87 90733 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 232.37 217.93 6284300000 4303500000 642150000 679980000 0 0 0 11238000 7982200 0 13949000 94493000 93122000 7549400 61361000 368980000 15748 1323 14350 131440;131441;131442;131443;131444;131445;131446;131447;131448;131449;131450;131451;131452;131453;131454;131455;131456;131457;131458;131459;131460 104575;104576;104577;104578;104579;104580;104581;104582;104583;104584;104585;104586;104587;104588;104589;104590;104591;104592;104593;104594;104595;104596 104590 22 FAVQDVNDVLDLEWDQHLEQK Unmodified 2540.2183 0.21833222 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 0 By MS/MS 2 0 1 1 96.548 88.417 3 3.3487E-30 114249 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 117.37 109.75 11876000 11876000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15749 1364 14351 131461 104597 104597 1 FAVYLPPK Unmodified 933.53239 0.53238955 929 P10768 ESD S-formylglutathione hydrolase yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 74.422 70.567 2 0.012206 88961 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.919 85.255 90165000 0 83374000 6790700 0 0 0 0 0 0 0 0 0 0 0 0 15750 929 14352 131462;131463;131464 104598;104599;104600;104601;104602;104603;104604;104605 104599 8 FAYGYIEDLK Unmodified 1217.5968 0.5968403 1289 P30740 SERPINB1 Leukocyte elastase inhibitor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.08 3.33 2 1 9 2 1 1 1 1 1 1 1 1 1 1 78.074 77.107 2 0.0065358 88207 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 64.654 52.126 601740000 0 437360000 85291000 2282300 2638800 10725000 4219500 0 0 0 16569000 20780000 7895600 13972000 0 15751 1289 14353 131465;131466;131467;131468;131469;131470;131471;131472;131473;131474;131475;131476 104606;104607;104608;104609;104610;104611;104612;104613;104614;104615;104616;104617 104612 12 FAYTGTEMRTVAEK Unmodified 1602.7712 0.77119262 1506 P46736 BRCC3 Lys-63-specific deubiquitinase BRCC36 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 55.929 49.952 3 0.00039594 64987 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.886 64.724 167220000 103760000 44225000 19242000 0 0 0 0 0 0 0 0 0 0 0 0 15752 1506 14354 131477;131478;131479 104618;104619;104620;104621 104618 4 FAYTGTEMRTVAEK Oxidation (M) 1618.7661 0.76610724 1506 P46736 BRCC3 Lys-63-specific deubiquitinase BRCC36 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 40.171 35.097 3 0.035037 44197 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 43.548 37.179 86636000 40438000 23525000 22673000 0 0 0 0 0 0 0 0 0 0 0 0 15753 1506 14354 131480;131481;131482 104622 104622 0 FAYVPFGAGR Unmodified 1083.5502 0.55016488 2637 Q16850 CYP51A1 Lanosterol 14-alpha demethylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 6 1 1 1 1 1 1 74.787 74.728 2 0.010131 86731 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 56.547 43.55 16824000 0 0 0 1713000 2634900 0 0 0 0 0 0 0 2410300 3710900 6354600 15754 2637 14355 131483;131484;131485;131486;131487;131488 104623;104624;104625;104626 104625 4 FCADSDGFSQELR Unmodified 1530.6409 0.64090673 1695 P52732 KIF11 Kinesin-like protein KIF11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.157 62.255 2 6.4519E-05 71059 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 104.79 52.517 78839000 0 0 0 2767700 3333300 5421000 4994900 5432700 5136900 8150500 6539500 12828000 9172100 4219300 10843000 15755 1695 14356 131489;131490;131491;131492;131493;131494;131495;131496;131497;131498;131499;131500 104627;104628;104629;104630;104631;104632;104633;104634;104635;104636;104637;104638;104639;104640 104633 14 FCAFGGNPPVTGPR Unmodified 1475.698 0.6979681 286 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 65.982 65.711 2 0.0011852 75726 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 60.434 49.91 5046300 0 0 0 1824700 0 0 0 0 0 0 0 0 3221700 0 0 15756 286 14357 131501;131502;131503;131504;131505 104641;104642;104643;104644 104643 4 FCAGGSYVGEDCPQWMVPITISTSEDPNQAK Oxidation (M) 3459.5057 0.50574174 1771 P55786 NPEPPS Puromycin-sensitive aminopeptidase yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 90.225 86.171 3 3.2276E-27 106889 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.184 79.81 71903000 0 71903000 0 0 0 0 0 0 0 0 0 0 0 0 0 15757 1771 14358 131506;131507 104645;104646;104647 104645 2887 3 FCAGGSYVGEDCPQWMVPITISTSEDPNQAK Unmodified 3443.5108 0.51082712 1771 P55786 NPEPPS Puromycin-sensitive aminopeptidase yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 94.519 90.467 3 2.2329E-16 112147 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.514 70.608 85990000 0 85990000 0 0 0 0 0 0 0 0 0 0 0 0 0 15758 1771 14358 131508;131509 104648;104649;104650 104648 3 FCDNSSAIQGK Unmodified 1225.5397 0.53973612 248 O15067 PFAS Phosphoribosylformylglycinamidine synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 25.346 24.794 2 0.00045941 32917 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.01 83.389 1189500000 42151000 1077000000 0 0 1696700 2600200 2431700 2924200 2990100 3097100 8248900 8343700 6602200 7805600 23579000 15759 248 14359 131510;131511;131512;131513;131514;131515;131516;131517;131518;131519;131520;131521;131522;131523 104651;104652;104653;104654;104655;104656;104657;104658;104659;104660;104661 104656 9 FCEADVSSDLRK Unmodified 1425.6558 0.65582851 4708 Q9NWY4;A8MVJ9 C4orf27 UPF0609 protein C4orf27;Putative UPF0609 protein C4orf27-like yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 5.4 3.77 2 1 2 2 1 1 1 47.204 44.543 3 6.3998E-05 57555 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.745 88.232 143780000 0 118420000 12446000 0 0 0 0 0 0 0 5643000 0 0 0 7274100 15760 4708 14360 131524;131525;131526;131527;131528 104662;104663;104664;104665 104662 3 FCEEDIDQILLRR Unmodified 1705.8458 0.84575455 4814;4517;2670 Q9P2D1;Q9HCK8;Q3L8U1 CHD7;CHD8;CHD9 Chromodomain-helicase-DNA-binding protein 7;Chromodomain-helicase-DNA-binding protein 8;Chromodomain-helicase-DNA-binding protein 9 no no 0 0 1 By MS/MS By matching By MS/MS 7.33 3.77 1 2 1 1 1 85.152 82.567 3 0.0012258 96067 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.209 37.495 10053000 2138100 0 0 0 0 0 0 0 1231500 0 0 0 0 0 6682900 15761 4814;4517;2670 14361 131529;131530;131531 104666;104667 104666 2 FCEELDPEK Unmodified 1165.4961 0.49613997 4708 Q9NWY4 C4orf27 UPF0609 protein C4orf27 yes yes 0 0 0 By MS/MS 2 0 1 1 47.854 42.291 2 0.041336 55012 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.118 47.591 12429000 0 12429000 0 0 0 0 0 0 0 0 0 0 0 0 0 15762 4708 14362 131532 104668 104668 1 FCENTQAGEGR Unmodified 1267.5251 0.52514869 3682 Q92896 GLG1 Golgi apparatus protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS 10 0 5 1 1 1 1 1 15.183 15.344 2 0.0007234 14957 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 77.677 68.463 10454000 0 0 0 1531300 0 0 1957500 0 0 0 0 0 1957800 1574700 3432400 15763 3682 14363 131533;131534;131535;131536;131537 104669;104670;104671 104671 3 FCETTIGCK Unmodified 1114.4787 0.47871577 1128 P21695 GPD1 Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic yes yes 0 0 0 By MS/MS 2 0 1 1 35.954 31.107 2 0.023811 40715 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.877 63.459 24197000 0 24197000 0 0 0 0 0 0 0 0 0 0 0 0 0 15764 1128 14364 131538 104672 104672 1 FCETTIGSK Unmodified 1041.4801 0.48009598 3318 Q8N335 GPD1L Glycerol-3-phosphate dehydrogenase 1-like protein yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 32.603 28.096 2 0.006757 36949 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.56 87.269 104110000 0 104110000 0 0 0 0 0 0 0 0 0 0 0 0 0 15765 3318 14365 131539;131540 104673 104673 1 FCFTPHTEEGCLSER Unmodified 1868.7822 0.78216801 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 2 16 1 1 1 1 2 1 1 1 2 1 1 1 2 2 60.773 60.228 2;3 3.7465E-10 68473 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 77.222 71.318 499150000 48853000 0 5876400 12580000 9125100 62185000 13162000 15236000 16583000 37402000 44824000 53721000 32917000 53598000 93084000 15766 1565 14366 131541;131542;131543;131544;131545;131546;131547;131548;131549;131550;131551;131552;131553;131554;131555;131556;131557;131558 104674;104675;104676;104677;104678;104679;104680;104681;104682;104683;104684;104685;104686;104687;104688;104689;104690;104691 104674 16 FCGIINISVEGLHDVMTEDPETGTYK Unmodified 2924.3572 0.35721024 4919 Q9UI26 IPO11 Importin-11 yes yes 0 0 0 By MS/MS 2 0 1 1 97.682 89.552 3 6.5405E-80 115615 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 117.21 112.23 24774000 24774000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15767 4919 14367 131559 104692 104692 1 FCLDNGAK Unmodified 923.4171 0.41710179 733 P00558 PGK1 Phosphoglycerate kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 33.244 31.964 2 0.0025411 41337 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.29 86.187 5346900000 216610000 4808000000 71960000 5248700 0 0 0 2720100 2971800 3867800 46471000 51096000 2900600 31920000 103120000 15768 733 14368 131560;131561;131562;131563;131564;131565;131566;131567;131568;131569;131570;131571;131572 104693;104694;104695;104696;104697;104698;104699;104700 104693 7 FCLESERK Unmodified 1067.507 0.50697943 4314 Q9H074 PAIP1 Polyadenylate-binding protein-interacting protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 31.701 27.112 2 0.016675 34097 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 130.77 99.476 184400000 99618000 36927000 47851000 0 0 0 0 0 0 0 0 0 0 0 0 15769 4314 14369 131573;131574;131575 104701 104701 0 FCNIMGSSNGVDQEHFSNVVK Oxidation (M) 2384.0525 0.052529216 4746 Q9NYL9 TMOD3 Tropomodulin-3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 6 4 2 2 1 1 1 1 64.388 60.81 3 9.3121E-07 80318 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.312 61.502 71115000 22687000 31138000 0 5778100 0 0 0 0 0 0 0 0 0 0 11511000 15770 4746 14370 131576;131577;131578;131579 104702;104703;104704 104704 6120 3 FCNIMGSSNGVDQEHFSNVVK Unmodified 2368.0576 0.057614594 4746 Q9NYL9 TMOD3 Tropomodulin-3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 73.188 71.923 3 3.545E-59 91976 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 136.58 129.3 198720000 64912000 85970000 0 0 0 0 0 0 2562000 5096800 6161700 11032000 4673900 8087200 10226000 15771 4746 14370 131580;131581;131582;131583;131584;131585;131586;131587;131588 104705;104706;104707;104708 104707 4 FCSPISSELAQNHEFYK Unmodified 2055.936 0.93602612 3227 Q8IVH2 FOXP4 Forkhead box protein P4 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 76.781 76.136 3 6.9752E-05 87663 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.279 68.278 96719000 33326000 0 0 0 2239100 4763700 0 5860300 5492000 5622800 6667000 6136500 3146600 6566200 16899000 15772 3227 14371 131589;131590;131591;131592;131593;131594;131595;131596;131597;131598;131599 104709;104710;104711;104712;104713;104714;104715 104711 6 FCSYGQYPADLAHK Unmodified 1655.7402 0.74022685 1181 P25054 APC Adenomatous polyposis coli protein yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 60.984 54.949 3 0.0051208 74030 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.03 38.126 16418000 13561000 0 2856800 0 0 0 0 0 0 0 0 0 0 0 0 15773 1181 14372 131600;131601 104716 104716 1 FCTSAADMK Unmodified 1029.426 0.42595192 3447 Q8NFH4 NUP37 Nucleoporin Nup37 yes yes 0 0 0 By MS/MS 2 0 1 1 33.545 28.902 2 0.028967 37562 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.494 61.039 36330000 0 36330000 0 0 0 0 0 0 0 0 0 0 0 0 0 15774 3447 14373 131602 104717 104717 1 FDAELLEIK Unmodified 1076.5754 0.57537657 4391 Q9H446 RWDD1 RWD domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 81.383 79.932 2 0.0054868 99697 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.11 86.618 163720000 45344000 51706000 0 3328000 3332100 11262000 0 0 0 14106000 0 0 5919100 6829800 21896000 15775 4391 14374 131603;131604;131605;131606;131607;131608;131609;131610;131611 104718;104719;104720;104721;104722 104719 4 FDAGELITQR Unmodified 1148.5826 0.58258722 1343 P35232 PHB Prohibitin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 67.54 67.87 2 0.0052474 77225 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.688 52.514 14460000 0 0 0 0 0 0 4921800 0 0 0 0 0 0 0 9537700 15776 1343 14375 131612;131613;131614;131615 104723;104724;104725;104726 104724 4 FDAMPFTLR Oxidation (M) 1112.5325 0.5324659 5067 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 73.286 73.549 2 0.0041664 84180 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.378 55.864 63417000 0 0 0 0 0 0 0 0 0 0 13189000 11203000 0 10301000 28724000 15777 5067 14376 131616;131617;131618;131619 104727;104728;104729;104730;104731;104732 104728 6432 6 FDAMPFTLR Unmodified 1096.5376 0.53755128 5067 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 82.917 82.974 2 0.0032531 95557 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.657 79.833 46622000 0 0 0 779170 0 0 0 0 760510 2028500 0 4237200 0 4934800 33882000 15778 5067 14376 131620;131621;131622;131623;131624;131625;131626 104733;104734;104735;104736 104733 4 FDAQTGADREVQR Unmodified 1491.7066 0.70661853 1482 P43686 PSMC4 26S protease regulatory subunit 6B yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 25.216 25.533 3 5.2743E-05 26887 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 83.314 55.452 13503000 0 0 0 0 0 0 0 0 0 6268600 7234400 0 0 0 0 15779 1482 14377 131627;131628 104737;104738 104738 2 FDASFFGVHPK Unmodified 1250.6084 0.60840804 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 1 2 2 2 2 2 2 2 2 2 2 74.674 74.757 2;3 0.0014117 86044 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 72.928 45.674 1591100000 0 0 0 51015000 21543000 301060000 58330000 62678000 66697000 112720000 104960000 178530000 98351000 127560000 407640000 15780 1565 14378 131629;131630;131631;131632;131633;131634;131635;131636;131637;131638;131639;131640;131641;131642;131643;131644;131645;131646;131647;131648;131649;131650;131651 104739;104740;104741;104742;104743;104744;104745;104746;104747;104748;104749;104750;104751;104752;104753;104754;104755;104756;104757;104758;104759;104760 104752 13 FDAVIGYK Unmodified 911.47527 0.4752686 3401 Q8NBQ5 HSD17B11 Estradiol 17-beta-dehydrogenase 11 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 55.337 55.422 2 0.013906 62983 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 71.342 30.49 157990000 0 0 0 8201800 14502000 11131000 11425000 17221000 10782000 16487000 17008000 17371000 15225000 18639000 0 15781 3401 14379 131652;131653;131654;131655;131656;131657;131658;131659;131660;131661;131662 104761;104762;104763;104764 104762 4 FDDAVVQSDMK Oxidation (M) 1269.5547 0.55471749 934 P11142 HSPA8 Heat shock cognate 71 kDa protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.048 35.229 2 0.0001864 38668 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 93.096 81.382 283640000 0 0 0 20980000 10326000 19770000 17796000 15453000 14956000 20704000 32249000 32996000 24110000 26124000 48179000 15782 934 14380 131663;131664;131665;131666;131667;131668;131669;131670;131671;131672;131673;131674 104765;104766;104767;104768;104769;104770;104771;104772;104773;104774;104775;104776;104777 104769 1211 13 FDDAVVQSDMK Unmodified 1253.5598 0.55980286 934 P11142 HSPA8 Heat shock cognate 71 kDa protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 49.175 49.333 2 2.6642E-05 54733 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 120.27 97.532 370650000 0 0 0 16202000 20748000 25598000 17260000 15772000 0 22211000 43717000 54546000 20500000 39544000 94548000 15783 934 14380 131675;131676;131677;131678;131679;131680;131681;131682;131683;131684;131685 104778;104779;104780;104781;104782;104783;104784;104785;104786;104787;104788;104789;104790 104786 13 FDDDFHIYVYDLVK Unmodified 1787.8407 0.8406524 5264 Q9Y657;Q9BPZ2;Q99865;Q5JUX0 SPIN1;SPIN2B;SPIN2A;SPIN3 Spindlin-1;Spindlin-2B;Spindlin-2A;Spindlin-3 yes no 0 0 0 By MS/MS 2 0 1 1 96.548 88.418 3 0.00063404 114240 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.044 57.945 17118000 17118000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15784 5264 14381 131686 104791 104791 1 FDDDVVSR Unmodified 951.42977 0.42977497 3702 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.724 33.907 2 0.0066704 37819 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 98.904 87.835 443720000 0 0 0 21327000 27551000 33672000 25853000 27095000 20158000 42195000 62352000 52489000 38143000 32065000 60818000 15785 3702 14382 131687;131688;131689;131690;131691;131692;131693;131694;131695;131696;131697;131698 104792;104793;104794;104795;104796;104797;104798;104799;104800;104801 104801 9 FDDDVVSRCTK Unmodified 1340.6031 0.60306466 3702 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 2 3 2 36.569 31.701 2;3 2.9379E-08 41477 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.28 105.08 341330000 48980000 267910000 24445000 0 0 0 0 0 0 0 0 0 0 0 0 15786 3702 14383 131699;131700;131701;131702;131703;131704;131705 104802;104803;104804;104805;104806 104804 5 FDDGAGGDNEVQR Unmodified 1378.5749 0.57493566 1369 P35998 PSMC2 26S protease regulatory subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 2 1 1 1 22.745 22.985 2 3.4035E-63 24001 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 190.86 178.33 941000000 0 0 0 60491000 90181000 70807000 33259000 26646000 19897000 139870000 120140000 203550000 42655000 49290000 84209000 15787 1369 14384 131706;131707;131708;131709;131710;131711;131712;131713;131714;131715;131716;131717;131718 104807;104808;104809;104810;104811;104812;104813;104814;104815;104816;104817;104818;104819 104808 13 FDDGAVFLAACSSGDTDEVLK Unmodified 2215.9943 0.99432886 232 O14974 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 88.037 83.374 2 0.00023711 105303 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.037 42.575 24643000 6886100 16079000 1677600 0 0 0 0 0 0 0 0 0 0 0 0 15788 232 14385 131719;131720;131721;131722 104820;104821;104822 104822 2 FDDGDVTECK Unmodified 1184.4656 0.46556813 3701;164 O00507;Q93008 USP9Y;USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-Y;Probable ubiquitin carboxyl-terminal hydrolase FAF-X no no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 8 3.46 2 6 1 1 1 1 1 1 1 1 28.409 27.042 2 0.0071865 28928 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 63.076 61.473 80975000 7476800 33931000 0 0 0 0 0 0 0 6137900 0 10661000 0 9020200 13748000 15789 164;3701 14386 131723;131724;131725;131726;131727;131728;131729;131730 104823;104824;104825;104826;104827;104828 104827 6 FDDGDVTECKMDDDEEMK Unmodified 2177.8075 0.80751565 3701;164 O00507;Q93008 USP9Y;USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-Y;Probable ubiquitin carboxyl-terminal hydrolase FAF-X no no 0 0 1 By MS/MS 2.5 0.5 1 1 2 51.918 46.583 3 2.5185E-06 60389 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.044 98.377 16377000 0 16377000 0 0 0 0 0 0 0 0 0 0 0 0 0 15790 164;3701 14387 131731;131732 104829 104829 1 FDDHEVSDISVSSVK Unmodified 1662.7737 0.77369504 1420 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 64.109 59.301 3 0.00025617 76110 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.493 81.06 155100000 0 150490000 4615000 0 0 0 0 0 0 0 0 0 0 0 0 15791 1420 14388 131733;131734;131735 104830;104831;104832;104833;104834 104832 4 FDDIAGQDLAK Unmodified 1191.5772 0.57716749 4848 Q9UBP0 SPAST Spastin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 52.05 52.191 2 0.0013382 58436 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 86.898 54.006 76983000 0 0 0 0 5353800 12949000 8561000 6733100 11765000 0 0 11713000 12021000 7888700 0 15792 4848 14389 131736;131737;131738;131739;131740;131741;131742;131743 104835;104836 104836 2 FDDLNPEAVEVLLNYAYTAQLK Unmodified 2525.269 0.2689708 5300 Q9Y6Y0 IVNS1ABP Influenza virus NS1A-binding protein yes yes 0 0 0 By MS/MS 2 0 1 1 102.39 94.263 3 0.00052478 121290 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.779 46.157 5941200 5941200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15793 5300 14390 131744 104837 104837 1 FDDLSGEYNPEVFDK Unmodified 1773.7734 0.77336069 3822 Q96EU6 RRP36 Ribosomal RNA processing protein 36 homolog yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching 10 0 7 1 1 1 1 1 1 1 77.001 77.074 2 0.0066455 88859 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 53.569 50.381 16137000 0 0 0 0 1931600 2198300 1975300 2067100 2308300 2464100 3191800 0 0 0 0 15794 3822 14391 131745;131746;131747;131748;131749;131750;131751 104838;104839 104838 2 FDDPLLGPR Unmodified 1028.5291 0.52909508 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.63 70.702 2 0.0036824 81189 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 95.741 52.618 127980000 0 0 0 6690100 5509200 13486000 6516500 6606100 5781300 13053000 12958000 15333000 8008300 10128000 23908000 15795 4819 14392 131752;131753;131754;131755;131756;131757;131758;131759;131760;131761;131762;131763 104840;104841;104842;104843;104844;104845;104846;104847;104848;104849;104850;104851;104852 104849 13 FDDTNPEK Unmodified 964.41379 0.41379055 848;1528 P07814;P47897 EPRS;QARS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase;Glutamine--tRNA ligase no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.925 15.096 2 0.005566 14463 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 106.36 91.581 785180000 0 0 0 33686000 26224000 45485000 49752000 42810000 31650000 65959000 101590000 83252000 66111000 89264000 149390000 15796 848;1528 14393 131764;131765;131766;131767;131768;131769;131770;131771;131772;131773;131774;131775 104853;104854;104855;104856;104857;104858;104859;104860;104861;104862;104863;104864 104859 12 FDEGRNNFEGEVTK Unmodified 1640.7431 0.74306362 838 P07237 P4HB Protein disulfide-isomerase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.94 3.84 6 1 11 2 3 2 1 1 1 1 1 1 1 1 1 1 1 42.474 40.498 2;3 0.000263 44809 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 67.115 54.961 440850000 27455000 148440000 126190000 0 2827500 8584700 3402200 8000300 5164500 7183300 19956000 15736000 4900200 13004000 50005000 15797 838 14394 131776;131777;131778;131779;131780;131781;131782;131783;131784;131785;131786;131787;131788;131789;131790;131791;131792;131793 104865;104866;104867;104868;104869;104870;104871;104872;104873;104874;104875;104876 104876 12 FDEGVASAPEVVDMQK Oxidation (M) 1736.7927 0.79271593 4351 Q9H1I8 ASCC2 Activating signal cointegrator 1 complex subunit 2 yes yes 0 1 0 By MS/MS 2 0 1 1 63.242 57.348 2 4.1231E-07 73534 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.44 87.575 16793000 0 16793000 0 0 0 0 0 0 0 0 0 0 0 0 0 15798 4351 14395 131794 104877 104877 5815 0 FDEHDGPVR Unmodified 1070.4781 0.47812215 1721 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 20.002 20.261 2 0.0078297 21093 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 71.379 60.31 42075000 0 0 0 0 1828100 4079100 0 2596300 2175300 5346700 5434300 5118200 3753700 3073800 8669300 15799 1721 14396 131795;131796;131797;131798;131799;131800;131801;131802;131803;131804 104878;104879;104880;104881;104882;104883;104884;104885 104878 8 FDEIFSATR Unmodified 1084.5189 0.51892433 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 63.318 62.957 2 0.0037422 71250 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 101.25 46.703 203160000 0 0 1967100 0 22568000 40612000 21785000 17925000 15864000 0 38322000 0 0 0 44113000 15800 3676 14397 131805;131806;131807;131808;131809;131810;131811;131812 104886;104887;104888;104889;104890;104891;104892;104893 104888 8 FDEIFSATRYIK Unmodified 1488.7613 0.76127986 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 1 By MS/MS 2 0 1 1 84.826 76.696 3 0.0062733 100152 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.49 52.439 8062100 8062100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15801 3676 14398 131813 104894 104894 1 FDEISFVNFAR Unmodified 1343.651 0.65100113 2163 Q08945 SSRP1 FACT complex subunit SSRP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 87.014 87.117 2 0.00028069 100565 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 104.17 92.319 33694000 0 0 0 0 1354600 4345400 0 2272500 2654300 4973800 3767800 3434400 0 2025500 8865400 15802 2163 14399 131814;131815;131816;131817;131818;131819;131820;131821;131822 104895;104896;104897;104898;104899;104900;104901;104902;104903 104898 9 FDENDVITCFANFESDEVELSYAK Unmodified 2841.2327 0.23272123 2046 Q00839 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 3 1 98.353 93.681 3 9.5152E-104 116608 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 158.89 155.84 512350000 338720000 153000000 20631000 0 0 0 0 0 0 0 0 0 0 0 0 15803 2046 14400 131823;131824;131825;131826;131827 104904;104905;104906;104907;104908;104909 104908 6 FDENGLPTHDMEGK Oxidation (M) 1604.6777 0.67768617 1579 P49589 CARS Cysteine--tRNA ligase, cytoplasmic yes yes 0 1 0 By MS/MS By MS/MS 2 0 3 2 1 39.498 34.994 2;3 0.00071229 45542 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.951 67.658 154660000 0 150980000 3679500 0 0 0 0 0 0 0 0 0 0 0 0 15804 1579 14401 131828;131829;131830 104910;104911 104910 2544 1 FDENGLPTHDMEGK Unmodified 1588.6828 0.68277155 1579 P49589 CARS Cysteine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.91 3.42 2 1 8 3 1 1 1 1 1 1 1 1 49.11 47.848 2;3 0.00095095 61209 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.871 68.657 368800000 0 310440000 0 0 0 3721900 2947200 2932300 0 5285600 7778200 9605100 0 5296800 20800000 15805 1579 14401 131831;131832;131833;131834;131835;131836;131837;131838;131839;131840;131841 104912;104913;104914;104915;104916 104913 5 FDETEQALANER Unmodified 1421.6423 0.64228694 3041 Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 44.586 44.759 2 3.4745E-81 49868 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 200.71 161.4 318900000 0 0 0 19682000 14066000 22327000 30514000 22850000 15225000 28088000 33446000 36461000 34894000 21377000 39967000 15806 3041 14402 131842;131843;131844;131845;131846;131847;131848;131849;131850;131851;131852;131853 104917;104918;104919;104920;104921;104922;104923;104924;104925;104926;104927;104928 104928 11 FDETEQALANERK Unmodified 1549.7372 0.73724996 3041 Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.72 1.37 1 24 1 2 2 2 2 2 2 2 2 2 2 2 2 36.385 36.371 2;3 2.6901E-52 39129 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 208.03 201.17 2006200000 0 37073000 0 102940000 103460000 189810000 152330000 147650000 140750000 161100000 178580000 219000000 177190000 189460000 206930000 15807 3041 14403 131854;131855;131856;131857;131858;131859;131860;131861;131862;131863;131864;131865;131866;131867;131868;131869;131870;131871;131872;131873;131874;131875;131876;131877;131878 104929;104930;104931;104932;104933;104934;104935;104936;104937;104938;104939;104940;104941;104942;104943;104944;104945;104946;104947 104934 17 FDETEQALANERKK Unmodified 1677.8322 0.83221298 3041 Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 0 0 2 By MS/MS 2 0 1 1 34.022 30.715 4 0.019117 38829 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 36.292 26.493 11559000 0 0 11559000 0 0 0 0 0 0 0 0 0 0 0 0 15808 3041 14404 131879 104948 104948 1 FDEVFSNK Unmodified 984.45526 0.45526144 3107 Q7Z5K2 WAPAL Wings apart-like protein homolog yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 49.244 42.47 2 0.012994 55658 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.458 63.257 164170000 6405900 157770000 0 0 0 0 0 0 0 0 0 0 0 0 0 15809 3107 14405 131880;131881 104949;104950 104949 2 FDEVLVNHFCEEFGK Unmodified 1868.8403 0.84033482 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 87.778 80.744 2;3 5.1916E-50 103698 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 163.99 148.1 242110000 139550000 102560000 0 0 0 0 0 0 0 0 0 0 0 0 0 15810 1337 14406 131882;131883;131884 104951;104952;104953 104952 2 FDFDACNEVPPAPK Unmodified 1605.7133 0.71334339 2532;2377 Q15424;Q14151 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.89 3.41 3 2 13 1 4 2 1 1 1 1 1 1 1 1 1 1 1 72.822 71.804 2;3 2.3027E-58 89128 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 241.39 230.17 369540000 0 282710000 0 4938800 5574700 6034300 5932400 5685000 4170900 7223400 7542700 11230000 5840900 7371100 15285000 15811 2532;2377 14407 131885;131886;131887;131888;131889;131890;131891;131892;131893;131894;131895;131896;131897;131898;131899;131900;131901;131902 104954;104955;104956;104957;104958;104959;104960;104961;104962;104963;104964;104965;104966;104967;104968;104969;104970;104971 104958 15 FDFLCQYHK Unmodified 1256.5648 0.56482866 4636 Q9NTK5 OLA1 Obg-like ATPase 1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS 10 0 4 1 1 1 1 65.848 66.061 3 0.040743 74905 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 30.318 15.651 12724000 0 0 0 0 0 2200300 0 0 0 0 0 0 1803500 1809400 6911300 15812 4636 14408 131903;131904;131905;131906 104972 104972 1 FDFLVATSQSK Unmodified 1241.6292 0.62920306 5023 Q9UMZ2 SYNRG Synergin gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 76.539 76.557 2 0.0043894 88446 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 61.593 50.233 22746000 0 0 0 2468600 0 2777400 0 0 4216300 5119600 4412300 0 0 3751800 0 15813 5023 14409 131907;131908;131909;131910;131911;131912;131913 104973;104974;104975;104976;104977 104974 3 FDFPYPNVEEAQK Unmodified 1582.7304 0.73037367 2921 Q6P1N0 CC2D1A Coiled-coil and C2 domain-containing protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.95 80.009 2 0.0025303 92296 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 58.223 42.957 45154000 0 0 0 1666900 2123200 3680300 2574900 2650800 2191400 5320500 3323500 4170500 3379300 2686700 11386000 15814 2921 14410 131914;131915;131916;131917;131918;131919;131920;131921;131922;131923;131924;131925 104978;104979;104980;104981 104979 4 FDFQAQSPK Unmodified 1066.5084 0.50835964 406 O60504 SORBS3 Vinexin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 7 3.69 1 1 3 1 1 1 1 1 47.589 46.797 2 0.0067432 51924 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.269 37.712 25086000 0 5513700 0 0 0 0 0 0 0 0 0 4845900 0 3264200 11462000 15815 406 14411 131926;131927;131928;131929;131930 104982;104983;104984 104982 3 FDGAEGSWFQK Unmodified 1270.5619 0.56185177 3679 Q92888 ARHGEF1 Rho guanine nucleotide exchange factor 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.192 66.276 2 0.0015064 75891 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 72.275 52.488 68600000 0 0 0 3834900 3151400 7271200 5189000 4241400 2921000 6581100 7620500 6565000 6228900 5849000 9147000 15816 3679 14412 131931;131932;131933;131934;131935;131936;131937;131938;131939;131940;131941;131942 104985;104986;104987;104988;104989;104990 104987 6 FDGCYCDSLENLADGYK Unmodified 2025.8084 0.80844234 818 P06280 GLA Alpha-galactosidase A yes yes 0 0 0 By MS/MS 2 0 1 1 83.675 78.955 2 0.00019751 98173 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.629 84.476 14035000 0 14035000 0 0 0 0 0 0 0 0 0 0 0 0 0 15817 818 14413 131943 104991 104991 0 FDGILGMAYPR Oxidation (M) 1254.6067 0.60669348 839 P07339 CTSD Cathepsin D;Cathepsin D light chain;Cathepsin D heavy chain yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 73.91 73.952 2 0.00062717 85260 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.1 50.161 136760000 0 0 0 40385000 8891600 13948000 5862700 15747000 0 11764000 9765400 14474000 8060600 0 7862400 15818 839 14414 131944;131945;131946;131947;131948;131949;131950;131951;131952;131953 104992;104993;104994;104995;104996;104997;104998;104999;105000;105001;105002;105003 105001 1030 11 FDGILGMAYPR Unmodified 1238.6118 0.61177885 839 P07339 CTSD Cathepsin D;Cathepsin D light chain;Cathepsin D heavy chain yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 83.445 83.441 2 0.016762 97010 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 44.203 31.226 10515000 0 0 0 3085300 0 0 0 3945900 0 0 0 0 0 0 3483600 15819 839 14414 131954;131955;131956 105004;105005 105005 2 FDGILTEGEGPR Unmodified 1289.6252 0.62518031 3866 Q96HE7 ERO1L ERO1-like protein alpha yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 61.358 61.734 2 0.00085814 69667 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.499 49.469 11970000 0 0 0 0 0 0 0 0 0 0 3901200 0 2960900 0 5108000 15820 3866 14415 131957;131958;131959 105006;105007 105006 2 FDGKNEDLVDK Unmodified 1278.6092 0.6091959 3761 Q96BN8 OTULIN Ubiquitin thioesterase otulin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 32.644 28.024 3 0.0022104 39228 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.153 62.743 128820000 24299000 102270000 2253000 0 0 0 0 0 0 0 0 0 0 0 0 15821 3761 14416 131960;131961;131962;131963 105008;105009;105010;105011;105012;105013 105013 6 FDGSENRPFSPSPLNNISSTVTVK Unmodified 2592.282 0.2819951 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 1 By MS/MS By matching By matching By MS/MS 8 3.46 1 3 1 1 1 1 80.317 78.371 3 0.0016243 91176 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 28.951 14.337 70332000 5318800 0 0 0 0 12831000 0 0 0 22516000 0 0 0 0 29666000 15822 2804 14417 131964;131965;131966;131967 105014;105015 105014 2 FDGVEGPR Unmodified 875.41373 0.41373097 2961 Q6PKG0 LARP1 La-related protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 29.321 29.384 2 0.045385 31797 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 48.561 28.715 118000000 0 0 0 14161000 8209800 17118000 10040000 11810000 8446800 15351000 14822000 0 0 18042000 0 15823 2961 14418 131968;131969;131970;131971;131972;131973;131974;131975;131976 105016 105016 1 FDGVEGPRTPK Unmodified 1201.6091 0.60913632 2961 Q6PKG0 LARP1 La-related protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 7.42 3.66 3 1 8 1 2 1 1 1 1 1 1 1 1 1 32.43 30.923 3 0.00029994 38913 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 97.813 89.888 164050000 28411000 30451000 63477000 0 2874400 3495800 3824900 8186200 5512700 4515600 0 6765600 0 6535600 0 15824 2961 14419 131977;131978;131979;131980;131981;131982;131983;131984;131985;131986;131987;131988 105017;105018;105019;105020;105021 105021 4 FDHLEEHLEK Unmodified 1295.6146 0.61461563 4150 Q9BTT4 MED10 Mediator of RNA polymerase II transcription subunit 10 yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 35.277 35.452 3 0.010259 38028 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 58.699 33.14 18996000 0 0 0 0 0 0 4433300 5085100 0 0 0 0 0 9477900 0 15825 4150 14420 131989;131990;131991 105022 105022 1 FDIELGR Unmodified 848.43922 0.43921744 5174 Q9Y3S1 WNK2 Serine/threonine-protein kinase WNK2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 2 1 1 1 1 1 65.118 65.274 2 0.018785 73735 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 111.28 0 242540000 0 0 0 0 13805000 18155000 18323000 20001000 15796000 22455000 22050000 25310000 27370000 24832000 34442000 15826 5174 14421 131992;131993;131994;131995;131996;131997;131998;131999;132000;132001;132002;132003 105023;105024;105025;105026;105027;105028;105029;105030;105031 105025 8 FDIFEDYASPTTAAQTLLYTAAK Unmodified 2536.2373 0.23733632 282 O15397 IPO8 Importin-8 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 99.369 95.799 2;3 1.3722E-14 117906 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.96 100.72 17235000 0 15498000 1736500 0 0 0 0 0 0 0 0 0 0 0 0 15827 282 14422 132004;132005 105032;105033 105032 2 FDILCVVR Unmodified 1020.5426 0.54263666 1590 P49736 MCM2 DNA replication licensing factor MCM2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 84.709 84.855 2 0.014742 97922 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.998 61.658 42781000 0 0 0 0 0 0 2585900 3186600 0 4313600 4274300 4860400 2789700 5145800 15625000 15828 1590 14423 132006;132007;132008;132009;132010;132011;132012;132013 105034;105035;105036 105035 3 FDILPSR Unmodified 846.45995 0.45995289 2150 Q08188 TGM3 Protein-glutamine gamma-glutamyltransferase E;Protein-glutamine gamma-glutamyltransferase E 50 kDa catalytic chain;Protein-glutamine gamma-glutamyltransferase E 27 kDa non-catalytic chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 65.384 65.414 2 0.03246 74420 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 72.875 43.537 64321000 0 0 0 15968000 4039100 2875200 3791800 11331000 2752200 5256200 4297000 9978600 4032200 0 0 15829 2150 14424 132014;132015;132016;132017;132018;132019;132020;132021;132022;132023 105037 105037 1 FDKEEEIRK Unmodified 1192.6088 0.60880197 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 2 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 14.072 13.688 3 0.011336 12776 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 90.15 66.12 220630000 2134500 0 19593000 10329000 11773000 14623000 10575000 14645000 0 22673000 16767000 25163000 23184000 21124000 28042000 15830 3641 14425 132024;132025;132026;132027;132028;132029;132030;132031;132032;132033;132034;132035;132036 105038;105039;105040;105041 105040 0 FDLHTSSHLDTLLEREDLSLPELLDEEDVLQECK Unmodified 4037.9416 0.94157159 5051 Q9UPN7 PPP6R1 Serine/threonine-protein phosphatase 6 regulatory subunit 1 yes yes 0 0 1 By MS/MS 2 0 1 1 98.4 90.269 4 4.3446E-10 116482 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.2 45.712 19974000 19974000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15831 5051 14426 132037 105042 105042 1 FDLMYAK Oxidation (M) 902.42079 0.42079019 1961;3031;4093;1962 P68363;A6NHL2;Q71U36;P0DPH8;P0DPH7;Q6PEY2;Q9NY65;Q9BQE3;P68366 TUBA1B;TUBAL3;TUBA1A;TUBA3E;TUBA8;TUBA1C;TUBA4A Tubulin alpha-1B chain;Tubulin alpha chain-like 3;Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-8 chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.63 1.6 1 2 57 1 1 1 2 4 4 3 5 5 4 7 7 5 5 6 54.266 54.246 1;2 0.014444 58163 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 79.116 40.31 9496200000 22462000 342010000 421970000 418070000 497400000 789120000 572820000 697920000 540350000 771500000 905750000 842190000 928920000 695490000 1050200000 15832 1961;3031;4093;1962 14427 132038;132039;132040;132041;132042;132043;132044;132045;132046;132047;132048;132049;132050;132051;132052;132053;132054;132055;132056;132057;132058;132059;132060;132061;132062;132063;132064;132065;132066;132067;132068;132069;132070;132071;132072;132073;132074;132075;132076;132077;132078;132079;132080;132081;132082;132083;132084;132085;132086;132087;132088;132089;132090;132091;132092;132093;132094;132095;132096;132097 105043;105044;105045;105046;105047;105048;105049;105050;105051;105052;105053;105054;105055;105056;105057;105058;105059;105060;105061;105062;105063;105064;105065;105066;105067;105068;105069;105070;105071;105072;105073;105074;105075;105076;105077;105078;105079;105080;105081;105082;105083;105084;105085;105086;105087 105083 3155 41 FDLMYAK Unmodified 886.42588 0.42587556 1961;3031;4093;1962 P68363;A6NHL2;Q71U36;P0DPH8;P0DPH7;Q6PEY2;Q9NY65;Q9BQE3;P68366 TUBA1B;TUBAL3;TUBA1A;TUBA3E;TUBA8;TUBA1C;TUBA4A Tubulin alpha-1B chain;Tubulin alpha chain-like 3;Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-8 chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 64.765 63.429 2 0.02333 71923 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 90.986 50.413 13728000000 608630000 3462200000 260540000 361960000 362990000 736360000 458410000 765240000 389490000 939090000 1050700000 1024800000 698860000 811090000 1797200000 15833 1961;3031;4093;1962 14427 132098;132099;132100;132101;132102;132103;132104;132105;132106;132107;132108;132109;132110;132111;132112;132113 105088;105089;105090;105091;105092;105093;105094;105095;105096;105097 105096 10 FDLNTTSHVDK Unmodified 1275.6095 0.60953025 469 O75170 PPP6R2 Serine/threonine-protein phosphatase 6 regulatory subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 38.725 38.806 3 0.0050704 43016 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 52.693 41.787 25524000 0 0 0 3424800 3924300 0 0 0 0 0 0 0 4853400 4277700 9044300 15834 469 14428 132114;132115;132116;132117;132118 105098 105098 1 FDLPDMK Unmodified 864.40514 0.40514012 1091 P19525 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 67.263 67.298 2 0.039725 76298 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.915 49.068 69684000 0 0 0 5190100 4360300 6049700 5812900 6482700 0 8293000 0 10503000 8024500 0 14968000 15835 1091 14429 132119;132120;132121;132122;132123;132124;132125;132126;132127 105099 105099 1 FDLQNPSR Unmodified 975.47739 0.47739386 3687 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 41.45 41.838 2 0.0087714 46156 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 85.064 67.028 73869000 0 0 0 0 0 9685800 0 5912400 0 10320000 15451000 15200000 0 0 17301000 15836 3687 14430 132128;132129;132130;132131;132132;132133;132134;132135 105100;105101;105102;105103;105104;105105;105106;105107 105107 8 FDMAENVVIVASQK Oxidation (M) 1565.7759 0.77594365 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 2 66.598 66.787 2 0.00091873 76135 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 74.76 63.596 8772200 0 0 0 0 0 5329000 0 0 0 0 0 3443100 0 0 0 15837 3119 14431 132136;132137;132138;132139;132140 105108;105109;105110;105111;105112 105110 4729 5 FDMELDDLPK Unmodified 1221.5587 0.55874023 1236 P28482 MAPK1 Mitogen-activated protein kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 81.409 79.877 2 0.010843 98621 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.213 74.302 636000000 71512000 433370000 9144400 3258900 3753600 14415000 3944800 5198200 5413100 11760000 13999000 12450000 5552100 10907000 31320000 15838 1236 14432 132141;132142;132143;132144;132145;132146;132147;132148;132149;132150;132151;132152;132153;132154;132155;132156;132157 105113;105114;105115;105116;105117;105118;105119;105120;105121;105122;105123 105115 8 FDMELDDLPK Oxidation (M) 1237.5537 0.55365485 1236 P28482 MAPK1 Mitogen-activated protein kinase 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.29 3.67 4 2 11 3 2 1 1 1 1 1 1 1 1 1 1 1 1 66.375 64.315 2 0.0034019 74411 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 70.056 60.469 296470000 20969000 210160000 3402400 3409200 2837800 8512300 5386800 0 6277300 4741300 6366600 6829900 4477200 4471900 8622400 15839 1236 14432 132158;132159;132160;132161;132162;132163;132164;132165;132166;132167;132168;132169;132170;132171;132172;132173;132174 105124;105125;105126;105127;105128;105129;105130;105131;105132;105133;105134 105125 1830 10 FDMIVPILEK Oxidation (M) 1219.6522 0.65224669 2284 Q13418 ILK Integrin-linked protein kinase yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.36 2.17 2 23 1 1 2 2 2 2 2 2 2 2 2 2 1 2 82.221 81.986 2 0.0011682 94723 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 95.523 73.752 490560000 0 104050000 10114000 16637000 20596000 40318000 29206000 23812000 27867000 45417000 38098000 49190000 22918000 12590000 49753000 15840 2284 14433 132175;132176;132177;132178;132179;132180;132181;132182;132183;132184;132185;132186;132187;132188;132189;132190;132191;132192;132193;132194;132195;132196;132197;132198;132199 105135;105136;105137;105138;105139;105140;105141;105142;105143;105144;105145;105146;105147;105148;105149;105150 105139 3717 10 FDMIVPILEK Unmodified 1203.6573 0.65733206 2284 Q13418 ILK Integrin-linked protein kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 92.096 91.068 2 0.0028283 105897 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 89.247 71.862 217350000 17659000 139410000 6805700 749780 0 4310200 2136100 4349500 2838300 6423800 3984100 5011800 2460300 4634800 16575000 15841 2284 14433 132200;132201;132202;132203;132204;132205;132206;132207;132208;132209;132210;132211;132212;132213 105151;105152;105153;105154;105155;105156;105157;105158;105159;105160;105161;105162;105163;105164;105165;105166;105167 105160 16 FDMVQLIDVAR Oxidation (M) 1321.67 0.67002202 919 P10398 ARAF Serine/threonine-protein kinase A-Raf yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 78.382 78.463 2 0.00026316 90564 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 86.624 72.855 6587500 0 0 0 0 0 3770500 2817000 0 0 0 0 0 0 0 0 15842 919 14434 132214;132215;132216;132217;132218 105168;105169;105170;105171;105172 105169 1186 5 FDNLYCCRESILDGLK Unmodified 2001.9288 0.92883225 377;3868 O43865;Q96HN2 AHCYL1;AHCYL2 Putative adenosylhomocysteinase 2;Putative adenosylhomocysteinase 3 no no 0 0 1 By MS/MS 2 0 1 1 86.083 77.952 3 0.0052826 101683 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.639 36.36 6861700 6861700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15843 377;3868 14435 132219 105173 105173 1 FDNLYGCR Unmodified 1043.4495 0.44946455 1164 P23526 AHCY Adenosylhomocysteinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 39.946 40.232 2 0.014173 43593 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 70.912 59.553 107670000 0 0 0 7132400 0 3129000 0 0 0 5149100 14455000 16306000 4769000 13728000 43002000 15844 1164 14436 132220;132221;132222;132223;132224;132225;132226;132227 105174;105175;105176;105177 105176 4 FDNLYGCRESLIDGIK Unmodified 1898.9196 0.91964777 1164 P23526 AHCY Adenosylhomocysteinase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 80.981 76.48 3 6.7312E-05 96300 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.575 75.996 354760000 117590000 229150000 8011000 0 0 0 0 0 0 0 0 0 0 0 0 15845 1164 14437 132228;132229;132230;132231;132232 105178;105179;105180;105181;105182 105178 5 FDNNSGQSAIK Unmodified 1179.552 0.55201537 488 O75376 NCOR1 Nuclear receptor corepressor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 19.64 19.525 2 0.0003091 20015 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 111.61 67.16 219000000 0 67968000 0 8628800 8352600 9819400 10749000 11400000 9987300 19881000 14784000 15054000 12556000 11863000 17958000 15846 488 14438 132233;132234;132235;132236;132237;132238;132239;132240;132241;132242;132243;132244;132245 105183;105184;105185;105186;105187;105188;105189;105190;105191;105192;105193;105194;105195;105196 105191 14 FDNSYSLWR Unmodified 1186.5407 0.5407224 4382 Q9H3P7 ACBD3 Golgi resident protein GCP60 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 72.179 71.645 2 0.0052089 81705 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.948 69.791 20364000 0 0 1658200 0 0 0 0 0 0 0 0 0 3260300 5235800 10210000 15847 4382 14439 132246;132247;132248;132249 105197;105198;105199;105200 105197 4 FDPETNSDDACTYHPGVPVFHDALK Unmodified 2831.2497 0.2497087 4896 Q9UHD1 CHORDC1 Cysteine and histidine-rich domain-containing protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 74.796 75.107 4 1.0242E-07 86127 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.839 43.272 17653000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17653000 15848 4896 14440 132250 105201;105202 105202 2 FDPVGPLPGPNPILPGR Unmodified 1741.9515 0.95154025 5169 Q9Y3I1 FBXO7 F-box only protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 2 2 1 1 2 2 2 2 2 2 2 87.543 87.622 2;3 1.4795E-06 101622 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 81.525 66.625 98927000 0 0 0 1421200 5120500 9165900 3970100 3970700 7055700 13200000 8648900 10707000 5770400 7625800 22271000 15849 5169 14441 132251;132252;132253;132254;132255;132256;132257;132258;132259;132260;132261;132262;132263;132264;132265;132266;132267;132268;132269;132270;132271 105203;105204;105205;105206;105207;105208;105209;105210;105211;105212;105213;105214;105215 105205 13 FDQFDFLIDIVPRDELKPPK Unmodified 2431.2787 0.27874763 2359 Q13952 NFYC Nuclear transcription factor Y subunit gamma yes yes 0 0 2 By MS/MS 2 0 1 1 99.001 90.871 4 6.2701E-05 117217 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.989 53.439 18510000 18510000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15850 2359 14442 132272 105216 105216 1 FDQLFDDESDPFEVLK Unmodified 1942.8836 0.88363942 3405 Q8NC51 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 0 0 0 By MS/MS 10 0 1 1 93.377 93.519 2 0.018699 108362 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.062 23.549 1825100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1825100 15851 3405 14443 132273 105217 105217 1 FDQLLAEEK Unmodified 1091.5499 0.5498901 1356;1357;1366;3090 P35579;Q7Z406;P35580;P35749 MYH9;MYH14;MYH10;MYH11 Myosin-9;Myosin-14;Myosin-10;Myosin-11 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.42 1.93 1 11 1 2 1 1 1 1 1 1 1 1 1 51.004 50.528 2 0.0033377 56919 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 131.06 89.409 207950000 0 2562600 0 0 30725000 37214000 18235000 0 23239000 27850000 30294000 37835000 0 0 0 15852 1356;3090;1357;1366 14444 132274;132275;132276;132277;132278;132279;132280;132281;132282;132283;132284;132285 105218;105219;105220;105221;105222;105223;105224;105225;105226;105227;105228;105229;105230;105231;105232;105233 105226 16 FDQLNIQR Unmodified 1032.5352 0.53524309 2066 Q01968 OCRL Inositol polyphosphate 5-phosphatase OCRL-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 48.012 48.261 2 0.010495 54201 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 79.469 44.661 59816000 0 0 0 0 3469000 5197800 0 5140500 3395800 7935400 7098600 7870000 7406100 4950600 7352100 15853 2066 14445 132286;132287;132288;132289;132290;132291;132292;132293;132294;132295;132296 105234;105235;105236;105237;105238;105239 105235 6 FDQLNIQRTQK Unmodified 1389.7365 0.7364621 2066 Q01968 OCRL Inositol polyphosphate 5-phosphatase OCRL-1 yes yes 0 0 1 By MS/MS 2 0 1 1 45.19 38.198 3 0.040022 52561 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.616 26.68 10667000 10667000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15854 2066 14446 132297 105240 105240 1 FDRGYISPYFINTSK Unmodified 1806.8941 0.89408495 930 P10809 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 2 1 1 2 1 1 1 1 1 2 76.122 76.227 2;3 1.0152E-09 87610 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 118.24 100.5 590260000 0 0 0 9764000 0 56270000 19036000 45750000 52066000 43015000 32773000 50698000 33426000 33178000 214290000 15855 930 14447 132298;132299;132300;132301;132302;132303;132304;132305;132306;132307;132308;132309;132310;132311 105241;105242;105243;105244;105245;105246;105247;105248;105249;105250;105251;105252;105253;105254;105255;105256;105257;105258;105259;105260 105249 19 FDSCLSDLAAVSNK Unmodified 1525.7083 0.70825802 4471 Q9H9E3 COG4 Conserved oligomeric Golgi complex subunit 4 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 74.523 74.643 2 0.0029383 86467 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 62.408 52.72 7880900 0 0 0 0 0 0 0 0 0 0 0 0 3267300 4613600 0 15856 4471 14448 132312;132313 105261 105261 1 FDSDAASPR Unmodified 964.42502 0.42502394 1281;753 P01889;P30460;P30480;P30491;Q29940;Q29718;P30685;P30498;P30493;P30495;P30490;P30462;P18465;P18464;P18463;P10319;P03989;P30486;Q31610;Q29963;Q07000;P30508;P30501;P10321;Q31612;Q29960;Q95604 HLA-B;HLA-C HLA class I histocompatibility antigen, B-7 alpha chain;HLA class I histocompatibility antigen, B-8 alpha chain;HLA class I histocompatibility antigen, B-42 alpha chain;HLA class I histocompatibility antigen, B-53 alpha chain;HLA class I histocompatibility antigen, B-59 alpha chain;HLA class I histocompatibility antigen, B-82 alpha chain;HLA class I histocompatibility antigen, B-35 alpha chain;HLA class I histocompatibility antigen, B-78 alpha chain;HLA class I histocompatibility antigen, B-55 alpha chain;HLA class I histocompatibility antigen, B-56 alpha chain;HLA class I histocompatibility antigen, B-52 alpha chain;HLA class I histocompatibility antigen, B-14 alpha chain;HLA class I histocompatibility antigen, B-57 alpha chain;HLA class I histocompatibility antigen, B-51 alpha chain;HLA class I histocompatibility antigen, B-37 alpha chain;HLA class I histocompatibility antigen, B-58 alpha chain;HLA class I histocompatibility antigen, B-27 alpha chain;HLA class I histocompatibility antigen, B-48 alpha chain;HLA class I histocompatibility antigen, B-81 alpha chain;HLA class I histocompatibility antigen, Cw-6 alpha chain;HLA class I histocompatibility antigen, Cw-15 alpha chain;HLA class I histocompatibility antigen, Cw-12 alpha chain;HLA class I histocompatibility antigen, Cw-2 alpha chain;HLA class I histocompatibility antigen, Cw-7 alpha chain;HLA class I histocompatibility antigen, B-73 alpha chain;HLA class I histocompatibility antigen, Cw-16 alpha chain;HLA class I histocompatibility antigen, Cw-17 alpha chain no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 16.751 16.805 2 0.0032531 16925 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 90.657 72.621 27768000 0 0 0 3442600 2695700 3092700 2464300 0 2830500 3937800 0 0 4060400 5243700 0 15857 753;1281 14449 132314;132315;132316;132317;132318;132319;132320;132321;132322;132323 105262;105263;105264;105265;105266;105267;105268;105269;105270;105271 105270 10 FDSDAASPRGEPR Unmodified 1403.643 0.64295564 1281 Q29963;Q07000;P30508;P30501;P10321;Q29960;Q95604 HLA-C HLA class I histocompatibility antigen, Cw-6 alpha chain;HLA class I histocompatibility antigen, Cw-15 alpha chain;HLA class I histocompatibility antigen, Cw-12 alpha chain;HLA class I histocompatibility antigen, Cw-2 alpha chain;HLA class I histocompatibility antigen, Cw-7 alpha chain;HLA class I histocompatibility antigen, Cw-16 alpha chain;HLA class I histocompatibility antigen, Cw-17 alpha chain no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 21.376 21.543 3 0.020691 22403 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 34.685 28.548 54903000 0 0 0 4509200 4078500 4141400 5377900 4056300 0 4135600 7071800 9514800 6276600 5740500 0 15858 1281 14450 132324;132325;132326;132327;132328;132329;132330;132331;132332;132333 105272 105272 1 FDSDAASQR Unmodified 995.43084 0.4308376 754 P01891;P10316;P01892;P30512;P30459;P16190;P16189 HLA-A HLA class I histocompatibility antigen, A-68 alpha chain;HLA class I histocompatibility antigen, A-69 alpha chain;HLA class I histocompatibility antigen, A-2 alpha chain;HLA class I histocompatibility antigen, A-29 alpha chain;HLA class I histocompatibility antigen, A-74 alpha chain;HLA class I histocompatibility antigen, A-33 alpha chain;HLA class I histocompatibility antigen, A-31 alpha chain no no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 12.332 12.547 2 0.0032531 11766 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 90.657 71.926 30478000 0 0 0 0 0 2266600 2152500 0 2542600 4204900 2550100 3923400 4076300 4607700 4154200 15859 754 14451 132334;132335;132336;132337;132338;132339;132340;132341;132342;132343 105273;105274;105275;105276;105277;105278;105279;105280;105281 105278 8 FDSEPSAVALELPTR Unmodified 1630.8203 0.82025131 1074 P18583 SON Protein SON yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 79.784 79.87 2 0.0053359 92313 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 55.776 16.902 14274000 0 0 0 0 0 7022300 7252200 0 0 0 0 0 0 0 0 15860 1074 14452 132344;132345 105282;105283;105284 105282 3 FDSEYER Unmodified 944.38758 0.3875758 1473 P43243 MATR3 Matrin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.295 21.499 2 0.032248 21279 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 119.57 114.71 2819200000 0 0 0 148960000 167660000 233380000 233110000 202150000 184560000 251650000 299980000 330220000 267610000 225120000 274760000 15861 1473 14453 132346;132347;132348;132349;132350;132351;132352;132353;132354;132355;132356;132357 105285;105286;105287;105288;105289 105288 0 FDSLLLR Unmodified 862.49125 0.49125301 3342 Q8N5A5 ZGPAT Zinc finger CCCH-type with G patch domain-containing protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 70.154 70.241 2 0.024152 80400 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 83.377 56.256 58652000 0 0 0 3641300 4070600 0 4245100 4364400 4460600 5944500 7865200 7005900 4843600 4778300 7432500 15862 3342 14454 132358;132359;132360;132361;132362;132363;132364;132365;132366;132367;132368 105290;105291;105292;105293;105294;105295;105296;105297;105298;105299;105300 105298 11 FDSNEEDSASVFSPSFGLK Unmodified 2061.9167 0.91673047 2084 Q02880 TOP2B DNA topoisomerase 2-beta yes yes 0 0 0 By MS/MS 2 0 1 1 87.803 82.961 2 4.7611E-06 103165 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.781 78.644 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15863 2084 14455 132369 105301 105301 1 FDSPESHVGVAWR Unmodified 1485.7001 0.70007659 910 P0DN79;P35520 CBS Cystathionine beta-synthase yes no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 59.96 60.138 3 0.00053077 67752 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.602 65.056 92752000 0 0 0 0 3904500 7650400 4152500 5801000 2642400 8260900 11641000 10884000 5067800 7780400 24967000 15864 910 14456 132370;132371;132372;132373;132374;132375;132376;132377;132378;132379;132380 105302;105303;105304;105305;105306;105307;105308;105309;105310 105305 9 FDSSLDRK Unmodified 966.47706 0.47705951 2080 Q02790 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.7 3.52 2 1 7 2 1 1 1 1 1 1 1 1 18.103 17.29 2 0.0059722 16092 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 132.08 68.937 1921500000 0 970800000 654480000 15257000 0 0 0 13415000 0 0 47962000 51090000 24901000 39205000 104340000 15865 2080 14457 132381;132382;132383;132384;132385;132386;132387;132388;132389;132390 105311;105312;105313;105314;105315;105316;105317;105318;105319;105320;105321 105312 6 FDSSLLSSDDETK Unmodified 1442.6413 0.64128389 1238 P28715 ERCC5 DNA repair protein complementing XP-G cells yes yes 0 0 0 By MS/MS 2 0 1 1 59.939 54.081 2 3.2626E-11 69624 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.86 101.74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15866 1238 14458 132391 105322 105322 1 FDTGNLCMVTGGANLGR Oxidation (M) 1797.8138 0.81380249 1905 P62701 RPS4X 40S ribosomal protein S4, X isoform yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.652 71.719 2 1.6384E-54 83001 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 164.68 147.32 531140000 0 0 0 20169000 39828000 37340000 33066000 29928000 33357000 51163000 45443000 89876000 46967000 41831000 62173000 15867 1905 14459 132392;132393;132394;132395;132396;132397;132398;132399;132400;132401;132402;132403 105323;105324;105325;105326;105327;105328;105329;105330;105331;105332;105333;105334;105335 105332 3080 13 FDTGNLCMVTGGANLGR Unmodified 1781.8189 0.81888787 1905 P62701 RPS4X 40S ribosomal protein S4, X isoform yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.246 78.306 2 1.4292E-09 90087 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 115.37 84.98 238240000 0 0 0 4440500 10825000 16219000 5941300 23364000 11327000 20635000 22134000 31841000 18383000 27313000 45817000 15868 1905 14459 132404;132405;132406;132407;132408;132409;132410;132411;132412;132413;132414;132415 105336;105337;105338;105339;105340;105341;105342;105343;105344;105345;105346 105341 11 FDTIYQILLK Unmodified 1252.7067 0.7067251 2401 Q14258 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.6 3.67 3 7 1 1 1 1 1 1 1 1 1 1 93.846 92.404 2 0.00049802 115739 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 117.04 90.931 79372000 43038000 22551000 1127000 0 0 944790 0 888600 1248000 2196200 1377900 0 0 1146100 4854600 15869 2401 14460 132416;132417;132418;132419;132420;132421;132422;132423;132424;132425 105347;105348;105349;105350;105351;105352 105351 6 FDTPVDK Unmodified 820.39668 0.39668393 2034 Q00403 GTF2B Transcription initiation factor IIB yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.542 28.737 2 0.023356 31273 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 89.55 44.939 309220000 0 0 0 19121000 19837000 27091000 15994000 21220000 22180000 35554000 37994000 29478000 26749000 22720000 31280000 15870 2034 14461 132426;132427;132428;132429;132430;132431;132432;132433;132434;132435;132436;132437 105353;105354;105355;105356 105356 4 FDTPVDKLPQL Unmodified 1271.6762 0.67615325 2034 Q00403 GTF2B Transcription initiation factor IIB yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.843 82.907 2 0.024105 95770 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 76.221 40.777 84598000 0 0 0 2620100 6850200 2015800 7626900 7176100 1853700 7759500 10855000 11152000 9666000 7413600 9609300 15871 2034 14462 132438;132439;132440;132441;132442;132443;132444;132445;132446;132447;132448;132449 105357;105358;105359;105360 105359 4 FDTQYPYGEK Unmodified 1246.5506 0.55061839 1260 P30040 ERP29 Endoplasmic reticulum resident protein 29 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 45.546 44.282 2 5.9359E-12 49420 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 163.77 88.386 1472300000 29718000 1179900000 8620700 10817000 9850000 11123000 13993000 9709100 9347400 12828000 28187000 34534000 14994000 22825000 75905000 15872 1260 14463 132450;132451;132452;132453;132454;132455;132456;132457;132458;132459;132460;132461;132462;132463;132464;132465 105361;105362;105363;105364;105365;105366;105367;105368;105369;105370;105371;105372;105373;105374;105375;105376;105377;105378;105379;105380;105381;105382;105383;105384;105385 105373 23 FDTTPNELVQLNK Unmodified 1517.7726 0.77257283 3340 Q8N573 OXR1 Oxidation resistance protein 1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching 8.67 2.98 1 5 1 1 1 1 1 1 74.192 73.525 2 1.0785E-07 84908 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 97.965 81.334 209670000 0 156340000 0 0 0 8994800 0 0 0 10739000 15059000 9568100 0 8973900 0 15873 3340 14464 132466;132467;132468;132469;132470;132471 105386;105387;105388;105389 105388 3 FDVDAADEK Unmodified 1008.44 0.4400053 4323 Q9H0D6 XRN2 5'-3' exoribonuclease 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33.754 33.102 2 0.0095982 36578 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 66.27 21.189 185580000 5595400 79303000 0 3915200 5637300 12906000 6411200 5589300 11645000 9277100 9063100 5271600 8860000 9497500 12612000 15874 4323 14465 132472;132473;132474;132475;132476;132477;132478;132479;132480;132481;132482;132483;132484;132485 105390;105391;105392;105393;105394;105395;105396;105397;105398;105399 105391 10 FDVGTNK Unmodified 779.38137 0.38136821 2568 Q15735 INPP5J Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 20.507 20.609 2 0.040686 21492 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 68.485 42.927 198690000 0 0 0 17294000 25364000 0 30367000 29925000 25293000 0 41132000 0 0 29311000 0 15875 2568 14466 132486;132487;132488;132489;132490;132491;132492 105400 105400 1 FDVINLAAEK Unmodified 1118.5972 0.59717465 1742 P54619;Q9UGJ0 PRKAG1;PRKAG2 5'-AMP-activated protein kinase subunit gamma-1;5'-AMP-activated protein kinase subunit gamma-2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 77.5 76.373 2 0.0015449 88383 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 93.111 66.227 441040000 12480000 175600000 8777300 10284000 13122000 22538000 17364000 21037000 16950000 20064000 22079000 28230000 19480000 18008000 35027000 15876 1742 14467 132493;132494;132495;132496;132497;132498;132499;132500;132501;132502;132503;132504;132505;132506;132507;132508 105401;105402;105403;105404;105405;105406;105407;105408;105409;105410;105411;105412;105413;105414;105415;105416;105417;105418 105401 18 FDVPGDENAEMDAR Oxidation (M) 1580.6413 0.64130066 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 49.157 48.53 2 8.2412E-13 54708 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 106.67 104.51 1001200000 0 51430000 0 86757000 49618000 112870000 54896000 39540000 74525000 91353000 86180000 124900000 79975000 45546000 103660000 15877 1518 14468 132509;132510;132511;132512;132513;132514;132515;132516;132517;132518;132519;132520;132521;132522 105419;105420;105421;105422;105423;105424;105425;105426;105427;105428;105429;105430;105431;105432 105430 2401 14 FDVPGDENAEMDAR Unmodified 1564.6464 0.64638604 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.56 1 1 13 2 1 1 1 1 1 1 1 1 1 2 1 1 58.847 58.184 2 1.5618E-20 66848 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 143.79 140.81 947750000 0 94958000 0 64420000 51156000 109860000 45369000 52209000 47364000 76542000 81473000 68552000 58241000 52002000 145610000 15878 1518 14468 132523;132524;132525;132526;132527;132528;132529;132530;132531;132532;132533;132534;132535;132536;132537 105433;105434;105435;105436;105437;105438;105439;105440;105441;105442;105443;105444;105445;105446;105447;105448;105449;105450;105451;105452;105453;105454;105455;105456;105457;105458;105459 105434 27 FDVPGDENAEMDARTILLNTK Oxidation (M) 2364.1267 0.12674002 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 86.208 81.557 3 1.6921E-06 102360 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.396 63.128 160440000 34112000 108860000 17473000 0 0 0 0 0 0 0 0 0 0 0 0 15879 1518 14469 132538;132539;132540;132541 105460;105461;105462;105463 105460 2401 3 FDVPGDENAEMDARTILLNTK Unmodified 2348.1318 0.13182539 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 88.489 84.835 3 3.497E-10 105763 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.22 77.09 221610000 0 203300000 18310000 0 0 0 0 0 0 0 0 0 0 0 0 15880 1518 14469 132542;132543;132544 105464;105465;105466;105467 105465 3 FDVQFPENNWINPDK Unmodified 1861.8635 0.8635131 440 O60884 DNAJA2 DnaJ homolog subfamily A member 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.18 3.74 3 1 7 1 3 1 1 1 1 1 1 1 88.759 86.934 2;3 6.7387E-05 101135 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.088 65.899 384780000 17638000 336070000 0 0 0 0 0 2165700 2100400 5344600 2965100 3320600 0 2251900 12926000 15881 440 14470 132545;132546;132547;132548;132549;132550;132551;132552;132553;132554;132555 105468;105469;105470;105471;105472;105473;105474;105475;105476;105477;105478 105471 11 FDVSGYPTLK Unmodified 1125.5706 0.57062555 982 P13667 PDIA4 Protein disulfide-isomerase A4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.629 66.713 2 0.000517 75661 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 126.07 0 548130000 0 0 0 32497000 25759000 21176000 36536000 37317000 20964000 39619000 75915000 50861000 48450000 45065000 113970000 15882 982 14471 132556;132557;132558;132559;132560;132561;132562;132563;132564;132565;132566;132567 105479;105480;105481;105482;105483;105484;105485;105486;105487;105488;105489;105490 105482 12 FDVSSTSVFK Unmodified 1115.5499 0.5498901 4003 Q96TA1 FAM129B Niban-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 67.341 67.571 2 0.017268 77246 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 49.06 27.76 122760000 0 0 0 0 0 0 0 20552000 0 38606000 0 33936000 0 29666000 0 15883 4003 14472 132568;132569;132570;132571 105491;105492 105492 1 FDYVPTDTTPR Unmodified 1310.6143 0.61428128 5299 Q9Y6X9 MORC2 MORC family CW-type zinc finger protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 56.288 56.712 2 0.006407 64606 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 56.632 47.298 9231600 0 0 0 0 0 0 0 0 0 0 0 0 4636000 0 4595600 15884 5299 14473 132572;132573;132574 105493;105494;105495 105495 3 FEAAETLEEAAMR Oxidation (M) 1482.6661 0.66605885 2143 Q07866 KLC1 Kinesin light chain 1 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 14 2 1 1 1 1 1 1 1 1 1 1 2 69.031 69.087 2 0.00044003 79535 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 73.781 55.342 72375000 0 0 0 6506900 3134300 5274500 4133700 4191800 6139200 4679400 5985600 7523400 5019800 3651100 16135000 15885 2143 14474 132575;132576;132577;132578;132579;132580;132581;132582;132583;132584;132585;132586;132587;132588 105496;105497;105498;105499;105500;105501;105502;105503 105496 3448 5 FEAAETLEEAAMR Unmodified 1466.6711 0.67114423 2143 Q07866 KLC1 Kinesin light chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 76.374 75.929 2 0.0013473 94010 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.39 84.003 83326000 0 42648000 0 0 0 5481000 0 4733900 0 5227200 4413900 4606700 0 3169000 13046000 15886 2143 14474 132589;132590;132591;132592;132593;132594;132595;132596 105504;105505;105506;105507;105508;105509 105506 5 FEADMTASTVIK Oxidation (M) 1327.633 0.63296781 5371 yes yes 0 1 0 By MS/MS 10 0 2 2 72.025 72.209 2 0.0036867 83119 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 53.775 17.38 + 44543000 0 0 0 0 0 0 0 44543000 0 0 0 0 0 0 0 15887 5371 14475 132597;132598 105510 105510 6751 1 FEAFEHENK Unmodified 1149.5091 0.50908792 4850 Q9UBQ0 VPS29 Vacuolar protein sorting-associated protein 29 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 6.94 3.84 6 1 11 2 3 2 1 1 1 1 1 1 1 1 1 1 1 28.594 26.943 2;3 0.00070818 36357 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 151.5 125.56 1717400000 118110000 407690000 1098100000 8602600 4638800 3790000 3170500 5908800 0 5345800 10768000 8118200 2928200 10153000 30013000 15888 4850 14476 132599;132600;132601;132602;132603;132604;132605;132606;132607;132608;132609;132610;132611;132612;132613;132614;132615;132616 105511;105512;105513;105514;105515;105516;105517;105518 105512 4 FEAGQFEPSETTAK Unmodified 1540.7046 0.70455285 2740 Q5JTJ3 COA6 Cytochrome c oxidase assembly factor 6 homolog yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.12 3.72 2 1 5 2 1 1 1 1 1 1 53.429 51.871 2 4.0623E-52 65717 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 187.58 165.02 453940000 0 391090000 2166100 0 0 5416900 0 0 0 0 7806000 19781000 0 5261800 22422000 15889 2740 14477 132617;132618;132619;132620;132621;132622;132623;132624 105519;105520;105521;105522;105523;105524;105525 105519 7 FEAHPNDLYVEGLPENIPFR Unmodified 2356.1488 0.14879609 1977 P78347 GTF2I General transcription factor II-I yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 86.84 86.996 3 3.8075E-08 100575 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.073 63.54 28957000 0 0 0 0 0 0 0 0 0 5892100 2337600 0 0 0 20728000 15890 1977 14478 132625;132626;132627 105526;105527;105528 105527 3 FEALDIEK Unmodified 963.49131 0.49131259 2990 Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 58.175 58.29 2 0.031786 66590 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 54.712 33.424 48184000 0 0 0 5747800 4147200 0 4057200 2917400 3652300 4204100 6034600 7466400 5229500 0 4727100 15891 2990 14479 132628;132629;132630;132631;132632;132633;132634;132635;132636;132637 105529;105530 105529 2 FEALNLSFK Unmodified 1067.5651 0.56514624 1007 P14859;Q9UKI9;P09086 POU2F1;POU2F3;POU2F2 POU domain, class 2, transcription factor 1;POU domain, class 2, transcription factor 3;POU domain, class 2, transcription factor 2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.521 80.582 2 0.0041874 92747 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.639 14.391 126560000 0 0 0 2747600 5012300 10874000 5686200 12470000 8146200 15369000 11191000 11902000 9381800 10038000 23746000 15892 1007 14480 132638;132639;132640;132641;132642;132643;132644;132645;132646;132647;132648;132649 105531;105532;105533;105534;105535;105536;105537;105538;105539;105540;105541;105542 105534 12 FEDATVQSDMK Oxidation (M) 1285.5496 0.54963211 1743 P54652 HSPA2 Heat shock-related 70 kDa protein 2 yes yes 0 1 0 By MS/MS 2 0 1 1 25.638 21.435 2 0.017946 28211 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.699 50.378 15094000 0 15094000 0 0 0 0 0 0 0 0 0 0 0 0 0 15893 1743 14481 132650 105543 105543 2831 1 FEDATVQSDMK Unmodified 1269.5547 0.55471749 1743 P54652 HSPA2 Heat shock-related 70 kDa protein 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 6 4 2 2 1 1 1 1 38.565 36.716 2 0.00034633 40379 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 101.11 89.954 69364000 0 58136000 1402600 0 0 0 0 0 0 0 3052700 0 0 0 6773400 15894 1743 14481 132651;132652;132653;132654 105544;105545;105546;105547 105546 4 FEDCTSER Unmodified 1042.4026 0.40257394 384 O60231 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 12.143 12.306 2 0.047929 10493 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.657 32.025 22214000 0 0 0 935510 1836800 2412000 0 0 1012000 2378400 2463600 1776300 2549100 2404100 4446000 15895 384 14482 132655;132656;132657;132658;132659;132660;132661;132662;132663;132664 105548 105548 1 FEDEDSDDVPR Unmodified 1322.5263 0.52625413 1596 P49756 RBM25 RNA-binding protein 25 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 32.663 32.778 2 0.00029757 36029 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 90.108 83.213 16467000 0 0 0 0 2038100 2669300 0 0 3936000 3308800 0 0 0 0 4514800 15896 1596 14483 132665;132666;132667;132668;132669;132670;132671;132672 105549;105550;105551;105552;105553;105554;105555;105556 105549 6 FEDEDSDDVPRK Unmodified 1450.6212 0.62121715 1596 P49756 RBM25 RNA-binding protein 25 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.19 2.31 1 2 24 1 2 2 2 2 2 2 2 2 2 2 2 2 2 23.019 22.716 2;3 8.5272E-09 22651 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 113.77 109.42 926640000 320390 30240000 0 35838000 25380000 88515000 47267000 63331000 80130000 88526000 93945000 71008000 78691000 88441000 135010000 15897 1596 14484 132673;132674;132675;132676;132677;132678;132679;132680;132681;132682;132683;132684;132685;132686;132687;132688;132689;132690;132691;132692;132693;132694;132695;132696;132697;132698;132699 105557;105558;105559;105560;105561;105562;105563;105564;105565;105566;105567;105568;105569;105570;105571;105572;105573 105569 15 FEDEEAQAVYWHSSAHIMGEAMER Unmodified 2822.2065 0.20646368 1209 P26639 TARS Threonine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 83.131 77.219 4 1.4774E-07 99424 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.569 67.937 17241000 17241000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15898 1209 14485 132700;132701 105574;105575 105575 2 FEDENFDVK Unmodified 1141.4928 0.49276916 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 49.936 48.077 2 0.01612 54533 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 56.81 38.902 53774000 0 37258000 0 0 0 9973400 0 0 6542200 0 0 0 0 0 0 15899 1601 14486 132702;132703;132704 105576;105577;105578 105578 3 FEDENFHYK Unmodified 1227.5197 0.51965261 2162 Q08752 PPID Peptidyl-prolyl cis-trans isomerase D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 6 12 2 2 2 1 1 1 1 1 1 1 1 1 1 1 1 39.941 38.319 2;3 0.00093953 48106 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 100.25 95.187 599680000 50716000 222170000 148900000 8776600 6831300 12928000 11299000 6963200 10570000 18087000 22411000 18985000 12013000 15663000 33365000 15900 2162 14487 132705;132706;132707;132708;132709;132710;132711;132712;132713;132714;132715;132716;132717;132718;132719;132720;132721;132722 105579;105580;105581;105582;105583;105584;105585 105584 4 FEDENFILK Unmodified 1153.5655 0.56554017 1931 P62937 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.07 3.64 9 31 3 16 17 19 7 1 1 1 2 1 1 1 2 1 1 2 2 79.789 77.3 2 3.1119E-28 83635 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 178.83 107.92 48562000000 5902900000 34438000000 2712400000 102110000 105240000 90567000 93852000 123200000 80831000 107720000 781050000 877170000 103120000 600800000 2443600000 15901 1931 14488 132723;132724;132725;132726;132727;132728;132729;132730;132731;132732;132733;132734;132735;132736;132737;132738;132739;132740;132741;132742;132743;132744;132745;132746;132747;132748;132749;132750;132751;132752;132753;132754;132755;132756;132757;132758;132759;132760;132761;132762;132763;132764;132765;132766;132767;132768;132769;132770;132771;132772;132773;132774;132775;132776;132777;132778;132779;132780;132781 105586;105587;105588;105589;105590;105591;105592;105593;105594;105595;105596;105597;105598;105599;105600;105601;105602;105603;105604;105605;105606;105607;105608;105609;105610;105611;105612;105613;105614;105615;105616;105617;105618;105619;105620;105621;105622;105623;105624;105625;105626;105627;105628;105629;105630;105631;105632;105633;105634;105635;105636;105637;105638;105639;105640;105641;105642;105643;105644;105645;105646;105647;105648;105649;105650;105651;105652;105653;105654;105655;105656;105657;105658;105659;105660;105661;105662;105663;105664;105665;105666;105667;105668;105669 105663 84 FEDQPEGIDLEVVTESTGK Unmodified 2091.9848 0.98481003 136 O00267 SUPT5H Transcription elongation factor SPT5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 5.4 3.77 2 1 2 1 2 1 1 84.77 80.76 2 2.6347E-13 100812 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.66 118.96 204200000 13021000 185700000 0 0 0 0 0 0 0 5485500 0 0 0 0 0 15902 136 14489 132782;132783;132784;132785;132786 105670;105671;105672;105673 105671 4 FEDRSPAAECLSEK Unmodified 1637.7355 0.7355354 2210 Q12931 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 37.768 36.646 3 3.4818E-19 49813 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 111.64 96.715 486280000 19211000 100500000 83775000 11940000 14748000 29253000 18143000 22760000 13422000 24027000 19035000 31336000 28422000 25722000 43991000 15903 2210 14490 132787;132788;132789;132790;132791;132792;132793;132794;132795;132796;132797;132798;132799;132800;132801;132802 105674;105675;105676;105677;105678;105679;105680;105681;105682;105683;105684;105685;105686;105687;105688;105689;105690;105691;105692;105693 105682 20 FEDYLNAESR Unmodified 1242.5517 0.55168102 2596 Q16181 SEPT7 Septin-7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.412 52.555 2 0.00088144 58485 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 118.18 89.09 127420000 0 0 0 5299500 5551900 12672000 7370600 7093000 3488600 12451000 28499000 13089000 7613900 8465600 15823000 15904 2596 14491 132803;132804;132805;132806;132807;132808;132809;132810;132811;132812;132813;132814 105694;105695;105696;105697;105698;105699;105700;105701;105702;105703;105704 105700 11 FEEAERSLK Unmodified 1107.556 0.55603811 996 P14314 PRKCSH Glucosidase 2 subunit beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0.632 1 3 1 2 2 1 42.402 40.117 2 0.0024297 26985 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 125.82 66.836 751710000 96972000 380330000 274410000 0 0 0 0 0 0 0 0 0 0 0 0 15905 996 14492 132815;132816;132817;132818;132819 105705;105706;105707;105708;105709;105710;105711 105710 7 FEEAQSILK Unmodified 1063.555 0.55497548 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.12 3.26 1 1 6 2 1 1 1 1 1 1 54.256 52.759 2 0.001127 67927 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 139.88 90.519 208320000 0 146210000 0 0 0 0 0 0 6666800 11428000 0 25569000 0 0 18453000 15906 1601 14493 132820;132821;132822;132823;132824;132825;132826;132827 105712;105713;105714;105715;105716;105717 105713 6 FEEAVEK Unmodified 850.40725 0.40724861 1721 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 19.598 19.764 2 0.02218 20164 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 105.39 16.656 291710000 0 0 0 19563000 18896000 30095000 23331000 0 18286000 43718000 34280000 37708000 33352000 32480000 0 15907 1721 14494 132828;132829;132830;132831;132832;132833;132834;132835;132836;132837;132838 105718;105719;105720;105721 105721 3 FEEAVIAR Unmodified 933.49198 0.4919813 3219 Q8IUR0 TRAPPC5 Trafficking protein particle complex subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.93 43.105 2 0.0052587 48857 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 129.4 66.555 380440000 0 0 0 16491000 25481000 19836000 29699000 42598000 21357000 28728000 48889000 35080000 35975000 29091000 47211000 15908 3219 14495 132839;132840;132841;132842;132843;132844;132845;132846;132847;132848;132849;132850 105722;105723;105724;105725;105726;105727;105728;105729;105730;105731;105732;105733 105733 11 FEEAVTSYQK Unmodified 1200.5663 0.56626845 3819 Q96EQ0 SGTB Small glutamine-rich tetratricopeptide repeat-containing protein beta yes yes 0 0 0 By MS/MS 2 0 1 1 40.811 35.759 2 5.8229E-06 46449 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 149.82 105.42 46601000 0 46601000 0 0 0 0 0 0 0 0 0 0 0 0 0 15909 3819 14496 132851 105734 105734 1 FEEETVK Unmodified 880.41781 0.4178133 437 O60841 EIF5B Eukaryotic translation initiation factor 5B yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 19.73 19.375 2 0.023725 19927 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 84.244 17.209 663780000 0 421790000 2586600 16890000 12326000 27522000 18865000 13320000 17716000 24427000 28545000 32310000 22750000 0 24726000 15910 437 14497 132852;132853;132854;132855;132856;132857;132858;132859;132860;132861;132862;132863;132864 105735;105736;105737;105738;105739;105740;105741;105742;105743 105741 9 FEEEVPR Unmodified 904.42905 0.42904669 214 O14777 NDC80 Kinetochore protein NDC80 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.451 33.635 2 0.023406 36818 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 86.866 29.403 76116000 0 0 0 3907500 4112000 5634800 4411100 5041800 3357300 9418300 9970000 9296000 7562400 4757100 8647900 15911 214 14498 132865;132866;132867;132868;132869;132870;132871;132872;132873;132874;132875;132876 105744;105745;105746;105747;105748;105749;105750;105751;105752;105753 105750 10 FEEFQNTLSK Unmodified 1241.5928 0.59281755 1409 P40222 TXLNA Alpha-taxilin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 54.571 53.043 2 7.2558E-32 60520 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 180.44 138.99 971340000 8132400 540020000 9142200 30225000 24900000 0 34983000 25371000 24387000 50623000 45523000 39890000 0 47396000 90746000 15912 1409 14499 132877;132878;132879;132880;132881;132882;132883;132884;132885;132886;132887;132888;132889;132890;132891 105754;105755;105756;105757;105758;105759;105760;105761;105762;105763;105764;105765;105766;105767;105768 105763 14 FEEFQTTMAK Unmodified 1230.5591 0.55907458 4652 Q9NUQ3 TXLNG Gamma-taxilin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 53.347 52.708 2 0.0012403 59760 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 128.12 106.59 240910000 0 159650000 0 0 3295100 6863000 2809000 3220900 4026000 6660600 10900000 13084000 5472700 6703800 18226000 15913 4652 14500 132892;132893;132894;132895;132896;132897;132898;132899;132900;132901;132902;132903;132904 105769;105770;105771;105772;105773;105774;105775;105776;105777;105778;105779;105780 105770 12 FEEFQTTMAK Oxidation (M) 1246.554 0.5539892 4652 Q9NUQ3 TXLNG Gamma-taxilin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.55 1 1 4 2 1 1 1 1 40.656 39.309 2 0.021577 44096 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 42.312 31.161 122960000 0 110620000 0 0 0 0 0 0 0 0 3032900 0 2800500 2853300 3648900 15914 4652 14500 132905;132906;132907;132908;132909;132910 105781;105782 105782 2 FEEGDQRDFTNSSSQEEIDK Unmodified 2360.004 0.0040419231 2123 Q06190 PPP2R3A Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha yes yes 0 0 1 By MS/MS 2 0 1 1 47.654 42.091 3 3.9288E-20 54833 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.264 83.912 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15915 2123 14501 132911 105783 105783 1 FEEHVQSVDIAAFNK Unmodified 1732.842 0.84204938 1255 P29692 EEF1D Elongation factor 1-delta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.1 3.3 3 2 15 2 2 1 1 2 1 1 1 1 1 1 2 1 3 71.369 70.309 2;3 1.5079E-41 79871 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 194.24 180.43 675170000 90179000 154710000 144980000 3771500 0 40699000 5742800 10077000 18880000 20623000 23389000 31024000 12065000 15530000 103500000 15916 1255 14502 132912;132913;132914;132915;132916;132917;132918;132919;132920;132921;132922;132923;132924;132925;132926;132927;132928;132929;132930;132931 105784;105785;105786;105787;105788;105789;105790;105791;105792;105793;105794;105795;105796 105788 7 FEELCSDLFR Unmodified 1314.5914 0.59143734 908;1047 P0DMV9;P0DMV8;P17066;P48741 HSPA1B;HSPA1A;HSPA6;HSPA7 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 79.428 79.5 2 0.00090082 91488 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 129.1 117.61 110450000 0 0 0 9665600 0 6156400 0 0 4311400 9923000 10590000 19366000 9204600 9281200 31950000 15917 908;1047 14503 132932;132933;132934;132935;132936;132937;132938;132939;132940 105797;105798;105799;105800;105801;105802;105803;105804;105805 105799 9 FEELNADLFR Unmodified 1252.6088 0.60880197 934;1743 P11142;P54652 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.375 80.435 2 1.4344E-09 92607 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 174.85 145.04 331160000 0 0 0 6579800 8187100 23495000 10076000 10734000 13177000 24066000 32518000 41972000 16399000 38266000 105680000 15918 934;1743 14504 132941;132942;132943;132944;132945;132946;132947;132948;132949;132950;132951;132952 105806;105807;105808;105809;105810;105811;105812;105813;105814;105815;105816;105817 105809 12 FEELNMDLFR Oxidation (M) 1328.6071 0.60708741 932 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 78.482 77.42 2 0.00078127 89578 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 108.98 104.29 1184400000 18936000 115690000 10075000 57359000 47489000 79236000 58909000 63974000 59631000 114340000 117450000 109440000 73710000 89936000 168250000 15919 932 14505 132953;132954;132955;132956;132957;132958;132959;132960;132961;132962;132963;132964;132965;132966;132967;132968;132969 105818;105819;105820;105821;105822;105823;105824;105825;105826;105827;105828;105829;105830;105831;105832;105833 105818 1206 16 FEELNMDLFR Unmodified 1312.6122 0.61217279 932 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87.708 86.675 2 2.66E-11 109191 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 161.37 140.47 263150000 31062000 48892000 1724700 4530900 0 11443000 5445500 11646000 9990300 18129000 11153000 15107000 5746600 12498000 75778000 15920 932 14505 132970;132971;132972;132973;132974;132975;132976;132977;132978;132979;132980;132981;132982;132983;132984 105834;105835;105836;105837;105838;105839;105840;105841;105842;105843;105844;105845;105846;105847;105848;105849;105850 105841 17 FEELNMDLFRSTMK Oxidation (M) 1775.8222 0.82224192 932 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 1 1 By MS/MS By MS/MS 2 0 3 2 1 85.039 78.05 3 0.0011482 96402 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.285 59.704 146960000 93457000 53505000 0 0 0 0 0 0 0 0 0 0 0 0 0 15921 932 14506 132985;132986;132987 105851;105852 105851 1206;1207 1 FEELNMDLFRSTMK 2 Oxidation (M) 1791.8172 0.81715654 932 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 2 1 By MS/MS By MS/MS 2 0 2 1 1 76.227 72.415 3 2.8074E-05 87906 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 99.531 99.531 86420000 0 43295000 43125000 0 0 0 0 0 0 0 0 0 0 0 0 15922 932 14506 132988;132989 105853;105854 105854 1206;1207 0 FEELNMDLFRSTMK Unmodified 1759.8273 0.82732729 932 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 1 By MS/MS 2 0 1 1 91.073 82.943 3 8.3399E-10 107638 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.98 99.706 35780000 35780000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15923 932 14506 132990 105855 105855 1 FEELNRTLK Unmodified 1148.619 0.61897272 5084 Q9Y262 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 43.865 39.249 3 0.011427 51439 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 59.931 27.611 139290000 0 84280000 55005000 0 0 0 0 0 0 0 0 0 0 0 0 15924 5084 14507 132991;132992;132993 105856;105857 105856 2 FEEMIQQIK Unmodified 1164.5849 0.5848954 1548 P48643 CCT5 T-complex protein 1 subunit epsilon yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 62.244 60.804 2 0.00029226 77486 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 150.84 109.81 4218200000 70573000 3549000000 37458000 20298000 19237000 58977000 28563000 28346000 0 50019000 63573000 56996000 35127000 48917000 151120000 15925 1548 14508 132994;132995;132996;132997;132998;132999;133000;133001;133002;133003;133004;133005;133006;133007;133008 105858;105859;105860;105861;105862;105863;105864;105865;105866;105867;105868;105869;105870;105871;105872 105861 14 FEEMIQQIK Oxidation (M) 1180.5798 0.57981002 1548 P48643 CCT5 T-complex protein 1 subunit epsilon yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.11 3.8 6 1 12 1 5 1 1 1 1 1 1 1 1 1 1 1 1 1 48.278 46.493 2 7.3825E-09 57404 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 186.3 144.65 3430600000 59562000 2556000000 57110000 24783000 24760000 98773000 46052000 31789000 40515000 95919000 83224000 73087000 71160000 58562000 109320000 15926 1548 14508 133009;133010;133011;133012;133013;133014;133015;133016;133017;133018;133019;133020;133021;133022;133023;133024;133025;133026;133027 105873;105874;105875;105876;105877;105878;105879;105880;105881;105882;105883;105884;105885;105886;105887;105888;105889 105886 2462 11 FEEMNAELEENK Oxidation (M) 1497.6293 0.62933899 2816 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 9.2 2.4 1 9 1 1 1 1 1 2 1 1 1 34.164 34.297 2 4.354E-08 42348 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.22 102.39 26344000 0 0 0 0 2165700 4245300 2219100 0 3255300 6569600 0 0 0 3272100 4617200 15927 2816 14509 133028;133029;133030;133031;133032;133033;133034;133035;133036;133037 105890;105891;105892;105893;105894;105895 105893 4453 6 FEEMNAELEENK Unmodified 1481.6344 0.63442437 2816 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 50.422 49.87 2 8.399E-46 62585 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 206.48 186.7 198700000 0 101610000 0 5345700 6959700 0 0 8973000 0 12022000 14563000 0 12205000 12126000 24899000 15928 2816 14509 133038;133039;133040;133041;133042;133043;133044;133045;133046;133047;133048 105896;105897;105898;105899;105900;105901;105902;105903;105904;105905;105906 105899 11 FEENAPAQSIGIRR Unmodified 1586.8165 0.81650333 3065 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 47.387 47.525 3 0.00034454 53441 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 49.31 32.098 57960000 0 0 0 4203000 4998900 5181400 6769200 3950500 3989100 5731900 0 5546000 6580700 3687500 7321600 15929 3065 14510 133049;133050;133051;133052;133053;133054;133055;133056;133057;133058;133059 105907;105908;105909;105910;105911;105912;105913;105914;105915 105909 9 FEEPAPLSYDSRPR Unmodified 1662.8002 0.80018457 2136 Q07157 TJP1 Tight junction protein ZO-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.032 58.147 3 2.4902E-17 65456 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 106.58 87.847 216320000 0 0 0 17026000 13224000 18487000 18251000 10915000 13904000 22828000 24147000 16244000 19229000 16053000 26011000 15930 2136 14511 133060;133061;133062;133063;133064;133065;133066;133067;133068;133069;133070;133071 105916;105917;105918;105919;105920;105921;105922;105923;105924;105925;105926;105927;105928;105929;105930 105921 14 FEEQGASDLAK Unmodified 1193.5564 0.55643205 3076 Q7Z2Z2 EFTUD1 Elongation factor Tu GTP-binding domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 32.935 32.423 2 2.4688E-12 40162 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 155.84 107.28 196340000 0 123110000 0 4216300 3575300 7984600 5423600 3302200 3261000 7405800 7683000 8772600 4655200 5584800 11373000 15931 3076 14512 133072;133073;133074;133075;133076;133077;133078;133079;133080;133081;133082;133083;133084;133085 105931;105932;105933;105934;105935;105936;105937;105938 105934 8 FEESMSEK Unmodified 985.40626 0.40626233 3682 Q92896 GLG1 Golgi apparatus protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 23.124 19.099 2 0.028816 25478 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.282 14.565 19309000 0 19309000 0 0 0 0 0 0 0 0 0 0 0 0 0 15932 3682 14513 133086 105939;105940 105940 2 FEETTADGR Unmodified 1024.4462 0.44615331 2054 Q01469 FABP5 Fatty acid-binding protein, epidermal yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.555 14.719 2 0.0031541 14175 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 92.439 77 163060000 0 0 0 33232000 12696000 10319000 9676700 25011000 4557700 11859000 16797000 11137000 10350000 9479600 7943700 15933 2054 14514 133087;133088;133089;133090;133091;133092;133093;133094;133095;133096;133097;133098 105941;105942;105943;105944;105945;105946;105947;105948;105949;105950;105951;105952 105951 12 FEETTADGRK Unmodified 1152.5411 0.54111633 2054 Q01469 FABP5 Fatty acid-binding protein, epidermal yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 24 2 2 2 2 3 2 2 1 2 3 2 1 9.2973 9.4152 2;3 0.0026819 7857 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 60.298 52.919 1557700000 0 0 0 575260000 84750000 88211000 83093000 223070000 44406000 59684000 126690000 76460000 128930000 59478000 7683100 15934 2054 14515 133099;133100;133101;133102;133103;133104;133105;133106;133107;133108;133109;133110;133111;133112;133113;133114;133115;133116;133117;133118;133119;133120;133121;133122 105953;105954;105955;105956;105957;105958;105959;105960;105961;105962;105963;105964;105965;105966 105958 7 FEEVEEEPEVIPGPPSESPGMLTK Oxidation (M) 2642.2309 0.23093032 323 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 78.969 79.027 2;3 7.3606E-22 91646 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 86.761 84.037 620160000 0 0 0 21325000 49602000 52250000 40653000 39978000 48178000 69511000 59448000 75152000 51518000 39500000 73046000 15935 323 14516 133123;133124;133125;133126;133127;133128;133129;133130;133131;133132;133133;133134;133135;133136;133137;133138;133139;133140;133141;133142;133143;133144;133145;133146 105967;105968;105969;105970;105971;105972;105973;105974;105975;105976;105977;105978;105979 105976 409 13 FEEVEEEPEVIPGPPSESPGMLTK Unmodified 2626.236 0.23601569 323 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 2 2 2 2 2 2 2 2 2 1 2 82.119 82.2 2;3 1.721E-17 95309 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 80.683 73.913 186460000 0 0 0 2005300 12341000 12177000 6449200 17105000 10133000 19322000 21014000 19422000 7896400 15418000 43178000 15936 323 14516 133147;133148;133149;133150;133151;133152;133153;133154;133155;133156;133157;133158;133159;133160;133161;133162;133163;133164;133165;133166;133167;133168 105980;105981;105982;105983;105984;105985;105986;105987;105988;105989;105990;105991;105992 105990 13 FEEYGPVIECDIVK Unmodified 1696.8018 0.80182405 4209 Q9BWF3;Q9BQ04 RBM4;RBM4B RNA-binding protein 4;RNA-binding protein 4B yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 81.035 79.343 2 1.3541E-14 98075 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.31 87.748 189070000 0 171870000 0 4169600 0 0 0 0 0 0 0 0 13029000 0 0 15937 4209 14517 133169;133170;133171;133172 105993;105994;105995 105994 3 FEFLGINR Unmodified 994.52362 0.52361577 3327 Q8N3X1 FNBP4 Formin-binding protein 4 yes yes 0 0 0 By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching 10 0 8 1 1 1 1 1 1 1 1 78.913 79.023 2 0.04959 91182 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 47.067 28.336 19556000 0 0 0 0 768640 0 1443300 1807900 1813300 0 2834400 0 3315200 2408500 5165100 15938 3327 14518 133173;133174;133175;133176;133177;133178;133179;133180 105996 105996 1 FEGAIYRK Unmodified 982.52362 0.52361577 1134 P22102 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 31.564 26.416 2 0.01759 36623 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 119.56 40.103 326690000 316440000 10253000 0 0 0 0 0 0 0 0 0 0 0 0 0 15939 1134 14519 133181;133182 105997 105997 0 FEGEPATHTQPGVQLQSNTYDLQESNVR Unmodified 3144.4748 0.47483427 2373 Q14141 SEPT6 Septin-6 yes yes 0 0 0 By MS/MS 10 0 1 1 67.657 68.175 3 4.6772E-26 77583 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.51 71.805 7639000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7639000 15940 2373 14520 133183 105998 105998 1 FEGEPATHTQPGVQLQSNTYDLQESNVRLK Unmodified 3385.6539 0.65386126 2373 Q14141 SEPT6 Septin-6 yes yes 0 0 1 By MS/MS 2 0 1 1 74.427 71.58 4 0.00030028 87339 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 37.054 31.52 3940100 0 0 3940100 0 0 0 0 0 0 0 0 0 0 0 0 15941 2373 14521 133184 105999 105999 1 FEGGDRDLEHLSK Unmodified 1501.7161 0.71612058 982 P13667 PDIA4 Protein disulfide-isomerase A4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.18 3.29 3 1 13 2 1 1 1 1 1 1 1 1 1 1 1 1 1 2 36.832 36.117 3 0.0020996 40248 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 55.314 46.715 1098000000 186020000 15204000 124250000 38821000 19988000 38932000 38057000 49343000 33784000 60006000 84763000 80121000 77239000 84937000 166530000 15942 982 14522 133185;133186;133187;133188;133189;133190;133191;133192;133193;133194;133195;133196;133197;133198;133199;133200;133201 106000;106001;106002;106003;106004;106005;106006;106007;106008;106009;106010;106011;106012;106013 106013 13 FEGLEADADDSNTR Unmodified 1538.6485 0.64849453 3166 Q86VI3 IQGAP3 Ras GTPase-activating-like protein IQGAP3 yes yes 0 0 0 By MS/MS 10 0 1 1 43.087 43.83 2 0.001176 48070 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.781 67.939 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15943 3166 14523 133202 106014 106014 1 FEGLSQQSSTSSAK Unmodified 1455.6842 0.68415175 4994 Q9ULH1 ASAP1 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 33.74 29.096 2 2.5459E-09 37966 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.43 113.96 25141000 0 25141000 0 0 0 0 0 0 0 0 0 0 0 0 0 15944 4994 14524 133203 106015 106015 1 FEGNFVHGEK Unmodified 1162.5407 0.5407224 3530 Q8WTS6 SETD7 Histone-lysine N-methyltransferase SETD7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 2 30.696 30.973 2;3 0.016272 33116 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 58.699 58.699 108550000 0 0 0 0 5365100 9680700 9535400 3349900 5147900 7946400 11166000 12142000 12320000 8583700 23312000 15945 3530 14525 133204;133205;133206;133207;133208;133209;133210;133211;133212;133213;133214;133215 106016;106017;106018;106019 106019 1 FEGVELNTDEPPMVFK Oxidation (M) 1866.871 0.87096625 1741 P54578 USP14 Ubiquitin carboxyl-terminal hydrolase 14 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 2 2 1 2 1 1 1 1 1 1 1 1 1 1 82.179 80.749 2 1.5967E-262 100259 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 273.24 260.23 587410000 46368000 410350000 19081000 3558800 0 18749000 5337000 5156800 0 14884000 12673000 11212000 4772500 8802700 26457000 15946 1741 14526 133216;133217;133218;133219;133220;133221;133222;133223;133224;133225;133226;133227;133228;133229;133230;133231;133232 106020;106021;106022;106023;106024;106025;106026;106027;106028;106029;106030;106031;106032;106033;106034;106035;106036;106037 106023 2826 18 FEGVELNTDEPPMVFK Unmodified 1850.8761 0.87605162 1741 P54578 USP14 Ubiquitin carboxyl-terminal hydrolase 14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 89.044 84.376 2 6.0989E-66 105844 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 228.87 202.08 1142400000 56549000 1074800000 11063000 0 0 0 0 0 0 0 0 0 0 0 0 15947 1741 14526 133233;133234;133235;133236 106038;106039;106040;106041;106042 106038 5 FEHQEWK Unmodified 1002.4559 0.45593014 4895 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 20.758 20.958 2 0.023397 20365 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.323 75.674 56348000 0 0 0 0 2839300 4264100 2915000 0 3459000 6121500 7920100 0 8115200 5491200 15223000 15948 4895 14527 133237;133238;133239;133240;133241;133242;133243;133244;133245 106043;106044;106045;106046;106047 106045 5 FEHQLIK Unmodified 913.50215 0.50215205 4973 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 yes yes 0 0 0 By MS/MS 2 0 1 1 33.19 29.919 2 0.023528 37814 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 132.09 90.592 13399000 0 0 13399000 0 0 0 0 0 0 0 0 0 0 0 0 15949 4973 14528 133246 106048 106048 0 FEIEIEPLFASIALYDVK Unmodified 2096.1082 0.10816005 3439 Q8NF50 DOCK8 Dedicator of cytokinesis protein 8 yes yes 0 0 0 By MS/MS 2 0 2 2 103.27 95.137 2;3 7.3344E-09 122300 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.97 0 12951000 12951000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15950 3439 14529 133247;133248 106049;106050 106049 2 FEIELPAAPK Unmodified 1113.607 0.60701105 3799 Q96DM3 C18orf8 Uncharacterized protein C18orf8 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 84.639 80.627 2 0.015913 100374 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.897 49.912 74587000 0 74587000 0 0 0 0 0 0 0 0 0 0 0 0 0 15951 3799 14530 133249;133250 106051 106051 1 FEINLISPDTK Unmodified 1275.6711 0.67106787 398 O60343 TBC1D4 TBC1 domain family member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 80.819 80.921 2 0.0016512 93546 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 71.349 16.114 20191000 0 0 0 0 0 7922600 0 0 0 0 0 0 3095600 0 9172300 15952 398 14531 133251;133252;133253 106052;106053;106054 106052 3 FEISAIRDLTTGYDDSQPDK Unmodified 2270.0703 0.070270995 3844 Q96G03 PGM2 Phosphoglucomutase-2 yes yes 0 0 1 By MS/MS 2 0 1 1 88.11 79.98 3 0.0065218 104137 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 20.064 12.442 7387100 7387100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15953 3844 14532 133254 106055 106055 1 FEISETSVNRGPEK Unmodified 1591.7842 0.78420015 1158 P23443 RPS6KB1 Ribosomal protein S6 kinase beta-1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 45.264 45.153 3 1.159E-08 50783 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 97.273 77.166 196250000 0 0 28686000 7909100 0 16915000 13137000 10009000 14746000 13321000 9609300 22814000 15837000 20192000 23082000 15954 1158 14533 133255;133256;133257;133258;133259;133260;133261;133262;133263;133264;133265;133266 106056;106057;106058;106059;106060;106061;106062;106063;106064 106061 7 FEIWDTAGQER Unmodified 1350.6204 0.62042929 1646;1104;1829 P51148;P61020;P20339 RAB5C;RAB5B;RAB5A Ras-related protein Rab-5C;Ras-related protein Rab-5B;Ras-related protein Rab-5A no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.996 72.065 2 8.6167E-74 82885 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 200.05 180.26 1020900000 0 0 0 38140000 38935000 75835000 51719000 78621000 51168000 87673000 132930000 108560000 76305000 84442000 196530000 15955 1646;1829;1104 14534 133267;133268;133269;133270;133271;133272;133273;133274;133275;133276;133277;133278 106065;106066;106067;106068;106069;106070;106071;106072;106073;106074;106075;106076;106077;106078;106079 106073 14 FELACLANLCPETAEESK Unmodified 2080.9445 0.9445419 290 O15514 POLR2D DNA-directed RNA polymerase II subunit RPB4 yes yes 0 0 0 By MS/MS 2 0 1 1 92.409 87.499 2 6.247E-05 108668 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.19 91.99 22948000 0 22948000 0 0 0 0 0 0 0 0 0 0 0 0 0 15956 290 14535 133279 106080 106080 1 FELDEDVK Unmodified 993.46549 0.46549177 1488 P45974 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.55 2 2 8 2 2 1 1 1 1 1 1 1 1 52.918 50.921 2 0.0087714 56930 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.064 48.043 1130700000 88874000 899100000 0 0 0 26589000 8094100 7142500 0 16504000 21862000 23204000 0 0 39321000 15957 1488 14536 133280;133281;133282;133283;133284;133285;133286;133287;133288;133289;133290;133291 106081;106082;106083;106084;106085;106086;106087;106088;106089;106090;106091 106085 11 FELDSEQVR Unmodified 1121.5353 0.53530267 2831 Q5VZE5 NAA35 N-alpha-acetyltransferase 35, NatC auxiliary subunit yes yes 0 0 0 By MS/MS 10 0 1 1 49.485 49.916 2 0.020738 56306 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 52.867 38.226 28033000 0 0 0 0 0 0 0 0 0 0 28033000 0 0 0 0 15958 2831 14537 133292 106092 106092 1 FELDSEQVRYEHR Unmodified 1706.8012 0.8012472 2831 Q5VZE5 NAA35 N-alpha-acetyltransferase 35, NatC auxiliary subunit yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 47.487 47.728 4 0.002555 53081 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 56.122 51.731 159530000 0 0 0 0 1354400 12390000 0 5095900 3347800 24399000 19394000 90828000 0 0 2722000 15959 2831 14538 133293;133294;133295;133296;133297;133298;133299;133300 106093;106094;106095 106095 2 FELESGALTLPGGPAASGDELDK Unmodified 2273.1063 0.10632215 202 O14686 KMT2D Histone-lysine N-methyltransferase 2D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 6.71 3.81 2 1 4 3 1 1 1 1 87.717 85.933 2;3 8.1696E-07 99842 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.834 68.851 93505000 0 81016000 0 0 0 0 0 0 0 2890700 0 2959100 0 1566100 5073200 15960 202 14539 133301;133302;133303;133304;133305;133306;133307 106096;106097;106098;106099;106100;106101 106099 6 FELLTNFPR Unmodified 1135.6026 0.60259438 598 O94888 UBXN7 UBX domain-containing protein 7 yes yes 0 0 0 By MS/MS 10 0 1 1 83.675 83.866 2 0.0052193 96794 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.906 62.541 7255300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7255300 15961 598 14540 133308 106102 106102 1 FELPMGTTEQPPLPQQTQPPAK Unmodified 2434.2202 0.22024647 677 O95639 CPSF4 Cleavage and polyadenylation specificity factor subunit 4 yes yes 0 0 0 By matching By MS/MS By matching 10 0 3 1 1 1 82.288 82.332 3 0.00036195 95269 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 37.09 34.208 6607300 0 0 0 0 1453600 0 0 2611500 0 0 2542200 0 0 0 0 15962 677 14541 133309;133310;133311 106103 106103 1 FELQHGTEEQQEEVR Unmodified 1857.8493 0.8493196 601 O94906 PRPF6 Pre-mRNA-processing factor 6 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 39.106 39.299 3 0.0005075 43621 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 61.641 55.797 46957000 0 0 0 2762400 3598100 0 4366100 4017000 0 0 6225000 9111400 9587300 0 7290200 15963 601 14542 133312;133313;133314;133315;133316;133317;133318;133319 106104;106105;106106;106107;106108;106109;106110 106104 7 FELQHGTEEQQEEVRK Unmodified 1985.9443 0.94428262 601 O94906 PRPF6 Pre-mRNA-processing factor 6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 2 22 2 2 2 2 2 2 2 2 1 2 2 1 2 32.681 32.553 3;4 1.1295E-05 35418 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 77.222 73.561 352970000 0 0 42525000 17146000 15823000 21030000 23601000 38980000 21156000 31910000 16492000 42557000 26296000 10360000 45089000 15964 601 14543 133320;133321;133322;133323;133324;133325;133326;133327;133328;133329;133330;133331;133332;133333;133334;133335;133336;133337;133338;133339;133340;133341;133342;133343 106111;106112;106113;106114;106115;106116;106117;106118;106119;106120;106121;106122;106123;106124;106125;106126 106116 13 FELSCYSLAPQIK Unmodified 1554.7752 0.77521537 737 P00966 ASS1 Argininosuccinate synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.651 82.714 2 2.012E-11 95379 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 119.53 103.9 183520000 0 0 0 664970 2465500 4293100 2515600 3675200 3904700 6550400 16467000 18779000 6446600 25136000 92617000 15965 737 14544 133344;133345;133346;133347;133348;133349;133350;133351;133352;133353;133354;133355 106127;106128;106129;106130;106131;106132;106133;106134;106135;106136;106137;106138 106131 12 FELTGIPPAPR Unmodified 1196.6554 0.65535823 934 P11142 HSPA8 Heat shock cognate 71 kDa protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 2 1 76.978 77.028 2 0.0015128 88386 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.23 26.101 140350000 0 0 0 8041300 3314000 7336300 0 5376900 4713500 7475100 18029000 14836000 7854200 14647000 48722000 15966 934 14545 133356;133357;133358;133359;133360;133361;133362;133363;133364;133365;133366;133367 106139;106140;106141;106142;106143;106144;106145;106146;106147;106148;106149;106150;106151 106141 13 FEMEQNLR Oxidation (M) 1081.4862 0.48624399 1354 P35527;CON__P35527 KRT9 Keratin, type I cytoskeletal 9 yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 112 14 11 4 4 23 7 12 8 6 13 7 3 32.312 32.447 2 2.4241E-07 27593 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 158.36 113.66 + 23379000000 0 0 0 2865900000 2126900000 2109200000 1615500000 3478300000 1466100000 2496400000 1571300000 1222200000 2238100000 1420500000 768300000 15967 1354 14546 133368;133369;133370;133371;133372;133373;133374;133375;133376;133377;133378;133379;133380;133381;133382;133383;133384;133385;133386;133387;133388;133389;133390;133391;133392;133393;133394;133395;133396;133397;133398;133399;133400;133401;133402;133403;133404;133405;133406;133407;133408;133409;133410;133411;133412;133413;133414;133415;133416;133417;133418;133419;133420;133421;133422;133423;133424;133425;133426;133427;133428;133429;133430;133431;133432;133433;133434;133435;133436;133437;133438;133439;133440;133441;133442;133443;133444;133445;133446;133447;133448;133449;133450;133451;133452;133453;133454;133455;133456;133457;133458;133459;133460;133461;133462;133463;133464;133465;133466;133467;133468;133469;133470;133471;133472;133473;133474;133475;133476;133477;133478;133479 106152;106153;106154;106155;106156;106157;106158;106159;106160;106161;106162;106163;106164;106165;106166;106167;106168;106169;106170;106171;106172;106173;106174;106175;106176;106177;106178;106179;106180;106181;106182;106183;106184;106185;106186;106187;106188;106189;106190;106191;106192;106193;106194;106195;106196;106197;106198;106199;106200;106201;106202;106203;106204;106205;106206;106207;106208;106209;106210;106211;106212;106213;106214;106215;106216;106217;106218;106219;106220;106221;106222;106223;106224;106225;106226;106227;106228;106229;106230;106231;106232;106233;106234;106235;106236;106237;106238;106239;106240;106241;106242;106243;106244;106245;106246;106247;106248;106249;106250;106251;106252;106253;106254;106255;106256;106257;106258;106259;106260;106261;106262;106263;106264;106265;106266;106267;106268;106269;106270;106271;106272;106273;106274;106275 106236 2058 124 FEMEQNLR Unmodified 1065.4913 0.49132937 1354 P35527;CON__P35527 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 25 2 2 2 2 3 2 2 2 2 2 2 2 46.62 46.788 1;2 0.004849 50936 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 145.04 109.16 + 48384000000 0 0 0 4472300000 2861100000 3416700000 1515800000 10329000000 2016200000 5243400000 4163200000 3887900000 5555300000 2417400000 2506000000 15968 1354 14546 133480;133481;133482;133483;133484;133485;133486;133487;133488;133489;133490;133491;133492;133493;133494;133495;133496;133497;133498;133499;133500;133501;133502;133503;133504 106276;106277;106278;106279;106280;106281;106282;106283;106284;106285;106286;106287;106288;106289;106290;106291;106292 106279 11 FEMLNAELEENQELANSRMAELEK Unmodified 2837.3212 0.32115908 463 O75150 RNF40 E3 ubiquitin-protein ligase BRE1B yes yes 0 0 1 By MS/MS 2 0 1 1 90.102 81.972 3 2.0964E-07 106550 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.72 66.193 7944100 7944100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15969 463 14547 133505 106293 106293 1 FEMPSTPPLSK Oxidation (M) 1248.606 0.60602477 5348 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 2 1 1 1 1 1 36.11 36.289 2 0.017833 39573 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 40.002 11.827 + 377300000 0 0 0 17830000 21589000 28261000 23236000 26041000 19980000 53546000 34253000 37069000 34208000 28207000 53081000 15970 5348 14548 133506;133507;133508;133509;133510;133511;133512;133513;133514;133515;133516;133517;133518 106294 106294 6737 1 FEMSDSLK Unmodified 955.43208 0.43208315 4326 Q9H0E9 BRD8 Bromodomain-containing protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 47.992 48.214 2 0.0082674 53286 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 86.794 15.881 94878000 0 0 0 0 6450000 9266200 7488800 8738800 4987700 9237600 12395000 10579000 0 9907200 15827000 15971 4326 14549 133519;133520;133521;133522;133523;133524;133525;133526;133527;133528;133529 106295;106296;106297;106298;106299;106300;106301;106302;106303;106304;106305 106302 11 FENAAAGNKPEAVEVTFADFDGVLYHISNPNGDK Unmodified 3635.7169 0.71685545 257 O15144 ARPC2 Actin-related protein 2/3 complex subunit 2 yes yes 0 0 1 By MS/MS 2 0 2 2 98.274 90.144 3;4 6.029E-80 116337 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 118.09 110.72 111880000 111880000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15972 257 14550 133530;133531 106306;106307 106307 2 FENADLNDTSR Unmodified 1280.5633 0.56330834 4426 Q9H6U6 BCAS3 Breast carcinoma-amplified sequence 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.082 31.271 2 1.5838E-05 32964 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 134.68 105.59 86755000 0 0 0 5229600 5741100 6170000 6096800 5748400 6096900 7180900 8832300 11953000 7330700 6328700 10046000 15973 4426 14551 133532;133533;133534;133535;133536;133537;133538;133539;133540;133541;133542;133543 106308;106309;106310;106311;106312;106313;106314;106315;106316;106317;106318;106319;106320;106321;106322 106312 15 FENEEFFRK Unmodified 1244.5826 0.58258722 2358 Q13951 CBFB Core-binding factor subunit beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.53 3 2 11 2 2 1 1 1 1 1 1 1 1 1 1 1 1 50.423 48.816 3 0.0024555 53209 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.474 60.716 256930000 48031000 63433000 24995000 5264200 0 10092000 6383400 5071100 7887100 9604500 11269000 12729000 11263000 11407000 29498000 15974 2358 14552 133544;133545;133546;133547;133548;133549;133550;133551;133552;133553;133554;133555;133556;133557;133558;133559 106323;106324;106325;106326;106327;106328;106329;106330;106331;106332;106333;106334;106335;106336;106337;106338 106327 16 FENLGIQPPK Unmodified 1141.6132 0.61315906 1066 P17980 PSMC3 26S protease regulatory subunit 6A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.78 2.74 1 2 15 1 2 1 2 1 1 2 1 1 2 1 1 1 1 63.888 63.022 2 1.0109E-08 76694 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 157.91 111.48 1470300000 395060 1027200000 0 37460000 34508000 43183000 16482000 27042000 13993000 65773000 67034000 83585000 19897000 0 33776000 15975 1066 14553 133560;133561;133562;133563;133564;133565;133566;133567;133568;133569;133570;133571;133572;133573;133574;133575;133576;133577 106339;106340;106341;106342;106343;106344;106345;106346;106347;106348;106349;106350;106351;106352;106353;106354;106355;106356;106357;106358;106359;106360;106361;106362;106363;106364;106365;106366;106367;106368;106369;106370;106371 106356 33 FENNSWVFMR Unmodified 1328.5972 0.59719142 450 O60942 RNGTT mRNA-capping enzyme;Polynucleotide 5'-triphosphatase;mRNA guanylyltransferase yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 79.77 79.912 2 0.043339 92098 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.01 20.864 8065800 0 0 0 0 0 1147800 0 1684200 0 0 0 0 0 0 5233800 15976 450 14554 133578;133579;133580 106372 106372 1 FENYGDK Unmodified 871.3712 0.37119746 4162 Q9BUJ2 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 15.166 15.31 2 0.026251 14628 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 79.116 45.113 106230000 0 0 0 8928600 7715200 6704300 8913300 6228200 6764900 8584600 9707200 13346000 13817000 15521000 0 15977 4162 14555 133581;133582;133583;133584;133585;133586;133587;133588;133589;133590;133591 106373;106374;106375;106376;106377;106378;106379;106380 106375 8 FEPEYSQIK Unmodified 1139.5499 0.5498901 2961 Q6PKG0 LARP1 La-related protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 47.902 47.297 2 0.0085714 60181 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.752 60.854 376290000 0 141970000 3759600 11581000 16021000 19024000 17856000 14997000 11743000 0 26242000 31056000 25683000 23941000 32416000 15978 2961 14556 133592;133593;133594;133595;133596;133597;133598;133599;133600;133601;133602;133603;133604 106381;106382;106383 106382 3 FEPIHGNFLLTGAYDNTAK Unmodified 2107.0375 0.037454724 303 O43172 PRPF4 U4/U6 small nuclear ribonucleoprotein Prp4 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 88.344 81.858 3 0.00010714 104320 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.164 34.345 54711000 20738000 33973000 0 0 0 0 0 0 0 0 0 0 0 0 0 15979 303 14557 133605;133606 106384;106385 106385 2 FEPPLFHPNVYPSGTVCLSILEEDK Unmodified 2887.4102 0.41023209 1952 P63279 UBE2I SUMO-conjugating enzyme UBC9 yes yes 0 0 0 By MS/MS By MS/MS 2.67 0.471 1 2 2 1 96.677 91.706 3 4.2686E-18 115392 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.525 72.046 45029000 41127000 3902000 0 0 0 0 0 0 0 0 0 0 0 0 0 15980 1952 14558 133607;133608;133609 106386;106387;106388 106388 3 FEPPQSDSDGQRR Unmodified 1517.6859 0.68588309 244 O15042 U2SURP U2 snRNP-associated SURP motif-containing protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.409 20.611 3 0.00084214 21340 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 57.802 44.821 310330000 0 0 0 24780000 18012000 29121000 21193000 21915000 20975000 24307000 32420000 42377000 25700000 26017000 23515000 15981 244 14559 133610;133611;133612;133613;133614;133615;133616;133617;133618;133619;133620;133621 106389;106390;106391;106392;106393;106394;106395;106396;106397;106398 106395 8 FEPTVFR Unmodified 894.45995 0.45995289 5280 Q9Y6E2 BZW2 Basic leucine zipper and W2 domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 57.078 57.198 2 0.023725 64890 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 84.244 17.209 466700000 0 0 0 37213000 27457000 51704000 31975000 27356000 25404000 39383000 44112000 59661000 29697000 35343000 57398000 15982 5280 14560 133622;133623;133624;133625;133626;133627;133628;133629;133630;133631;133632;133633 106399 106399 1 FEPTVFRDTLVQGLNEAGDDLEAVAK Unmodified 2833.4134 0.41340321 5280 Q9Y6E2 BZW2 Basic leucine zipper and W2 domain-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS 2.67 0.471 1 2 1 2 98.132 94.281 3 9.1283E-67 116443 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.21 92.719 38992000 1487500 37504000 0 0 0 0 0 0 0 0 0 0 0 0 0 15983 5280 14561 133634;133635;133636 106400;106401;106402 106400 3 FEPVLQWTK Unmodified 1146.6073 0.6073454 1142 P22670 RFX1 MHC class II regulatory factor RFX1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 79.512 78.725 2 0.033862 98510 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.42 44.717 51358000 0 27393000 3723200 0 0 0 0 0 2558700 3748700 3564400 0 2120200 3179700 5070000 15984 1142 14562 133637;133638;133639;133640;133641;133642;133643;133644 106403;106404;106405 106404 3 FEQAQMLDPYLIK Oxidation (M) 1610.8014 0.80143012 4944 Q9UJX3 ANAPC7 Anaphase-promoting complex subunit 7 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.06 2.49 1 1 14 2 1 1 1 1 1 1 1 1 1 2 1 2 78.022 77.584 2 3.0777E-08 95383 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.7 94.017 217580000 0 54633000 0 7863500 7787300 12812000 8776900 7260000 10483000 16224000 12209000 13935000 25422000 11822000 28356000 15985 4944 14563 133645;133646;133647;133648;133649;133650;133651;133652;133653;133654;133655;133656;133657;133658;133659;133660 106406;106407;106408;106409;106410;106411;106412;106413;106414;106415;106416;106417;106418;106419 106409 6287 13 FEQAQMLDPYLIK Unmodified 1594.8065 0.8065155 4944 Q9UJX3 ANAPC7 Anaphase-promoting complex subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 84.986 84.281 2 5.0232E-22 104747 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 174.42 164.53 186990000 0 127500000 0 0 0 4781700 0 6404600 0 7137200 6075700 6820400 2858300 6262300 19144000 15986 4944 14563 133661;133662;133663;133664;133665;133666;133667;133668;133669;133670 106420;106421;106422;106423;106424;106425;106426;106427 106422 7 FEQLISR Unmodified 891.48142 0.48141661 4521 Q9HCS7 XAB2 Pre-mRNA-splicing factor SYF1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 43.861 43.984 2 0.037337 48463 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 69.984 6.6781 231530000 0 0 0 14974000 17302000 17730000 17526000 18389000 9459800 25218000 34280000 34820000 21978000 19849000 0 15987 4521 14564 133671;133672;133673;133674;133675;133676;133677;133678;133679;133680;133681 106428 106428 1 FEQLSESAK Unmodified 1037.5029 0.50293991 5254 Q9Y5X3 SNX5 Sorting nexin-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 28.452 27.628 2 0.00061025 34582 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.52 56.443 371410000 7212300 188370000 0 8601300 6933800 18655000 12974000 11501000 7693600 20955000 17886000 18661000 14167000 13329000 24472000 15988 5254 14565 133682;133683;133684;133685;133686;133687;133688;133689;133690;133691;133692;133693;133694;133695;133696 106429;106430;106431;106432;106433;106434;106435;106436;106437;106438;106439;106440;106441;106442;106443;106444;106445;106446;106447;106448 106432 19 FESLEPEMNNQASR Oxidation (M) 1666.7257 0.72569899 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 1 0 By MS/MS 10 0 1 1 40.87 40.91 2 0.0017748 45777 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 50.108 44.794 2925500 0 0 0 0 0 2925500 0 0 0 0 0 0 0 0 0 15989 2047 14566 133697 106449 106449 3319 1 FESLEPEMNNQASR Unmodified 1650.7308 0.73078437 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 53.055 53.194 2 0.02737 59163 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 39.179 30.45 11136000 0 0 0 0 0 0 4708800 0 0 0 0 0 0 6427200 0 15990 2047 14566 133698;133699 106450 106450 1 FESPESQASAEQPEM Oxidation (M) 1681.6777 0.67774575 498 O75436 VPS26A Vacuolar protein sorting-associated protein 26A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 41.862 42.42 2 0.00063057 46120 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 60.398 60.398 36624000 0 0 0 0 0 0 0 0 0 0 7252500 8875000 0 6524600 13971000 15991 498 14567 133700;133701;133702;133703 106451;106452;106453;106454 106453 646 4 FESPESQASAEQPEM Unmodified 1665.6828 0.68283113 498 O75436 VPS26A Vacuolar protein sorting-associated protein 26A yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 56.993 57.202 2 1.395E-05 64270 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.92 94.479 54440000 0 0 0 0 3523300 2680700 0 0 0 2367300 10186000 10703000 0 5657100 19323000 15992 498 14567 133704;133705;133706;133707;133708;133709;133710 106455 106455 1 FESPEVAER Unmodified 1062.4982 0.49818889 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 35.89 35.998 2 0.0030095 40141 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 126.41 101.49 1394600000 0 0 0 105900000 117810000 0 131320000 139820000 123700000 186160000 0 0 208500000 182580000 198770000 15993 1681 14568 133711;133712;133713;133714;133715;133716;133717;133718;133719;133720;133721 106456;106457;106458;106459;106460;106461;106462;106463;106464;106465;106466;106467;106468 106468 13 FESSFSHK Unmodified 967.43995 0.43994572 3 A0AVT1 UBA6 Ubiquitin-like modifier-activating enzyme 6 yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 22.461 18.572 2 0.019411 23469 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 86.953 68.148 204960000 145830000 0 59128000 0 0 0 0 0 0 0 0 0 0 0 0 15994 3 14569 133722;133723 106469 106469 1 FESTDLDMLIK Oxidation (M) 1326.6377 0.63771883 1992 P80303 NUCB2 Nucleobindin-2;Nesfatin-1 yes yes 0 1 0 By MS/MS 2 0 1 1 83.314 78.593 2 0.014136 97746 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 61.765 41.531 15368000 0 15368000 0 0 0 0 0 0 0 0 0 0 0 0 0 15995 1992 14570 133724 106470 106470 3244 1 FESTDLDMLIK Unmodified 1310.6428 0.64280421 1992 P80303 NUCB2 Nucleobindin-2;Nesfatin-1 yes yes 0 0 0 By MS/MS 2 0 1 1 88.45 83.608 2 0.0048 103835 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.775 75.15 28306000 0 28306000 0 0 0 0 0 0 0 0 0 0 0 0 0 15996 1992 14570 133725 106471 106471 1 FETEPVSK Unmodified 935.46001 0.46001246 5236 Q9Y5K6 CD2AP CD2-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 23.9 23.463 2 0.011537 29432 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.01 80.906 125470000 0 50141000 0 5698000 0 6113800 5210300 5065300 4676900 6669400 7062900 9115100 8840900 6038000 10839000 15997 5236 14571 133726;133727;133728;133729;133730;133731;133732;133733;133734;133735;133736;133737;133738 106472;106473;106474 106473 3 FETEQALR Unmodified 992.49271 0.49270958 84;68 CON__Q04695;Q04695;CON__P08727;P08727 KRT17;KRT19 Keratin, type I cytoskeletal 17;Keratin, type I cytoskeletal 19 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 34.431 34.613 2 0.0025033 36887 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 148.33 98.737 + 384610000 0 0 0 239560000 0 0 0 0 38755000 0 0 0 0 52466000 53828000 15998 84;68 14572 133739;133740;133741;133742 106475;106476;106477;106478 106475 4 FETFCLDPSLVTK Unmodified 1555.7592 0.75923095 4895 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 85.875 85.942 2 5.5355E-13 99349 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 135.66 110.28 193780000 0 0 0 5054900 10440000 15091000 10161000 14827000 14532000 18646000 17558000 17415000 15312000 15452000 39291000 15999 4895 14573 133743;133744;133745;133746;133747;133748;133749;133750;133751;133752;133753;133754 106479;106480;106481;106482;106483;106484;106485;106486;106487;106488;106489;106490;106491;106492 106482 14 FETLQAQAGK Unmodified 1091.5611 0.56112349 69;88;107 CON__P08729;CON__Q3KNV1;P08729;CON__Q9DCV7 KRT7 Keratin, type II cytoskeletal 7 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 34.237 33.715 2 2.9034E-08 36769 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 155.75 107.91 + 1008800000 0 114700000 0 42713000 72335000 63507000 72171000 59718000 43708000 76515000 100560000 130320000 87922000 60854000 83816000 16000 69;88;107 14574 133755;133756;133757;133758;133759;133760;133761;133762;133763;133764;133765;133766;133767;133768 106493;106494;106495;106496;106497;106498;106499;106500;106501;106502;106503;106504;106505;106506;106507;106508;106509 106499 17 FETNPEDSPADQTLIVQSQPVEVIYDAK Unmodified 3132.5139 0.51390511 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By MS/MS 2 0 1 1 91.062 86.165 3 0.009913 107143 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 22.954 17.161 28835000 0 28835000 0 0 0 0 0 0 0 0 0 0 0 0 0 16001 3023 14575 133769 106510 106510 1 FETPGIMQFTNEEK Unmodified 1669.7658 0.76577289 2071 Q02218 OGDH 2-oxoglutarate dehydrogenase, mitochondrial yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 83.869 79.861 2 2.465E-45 99481 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 178.53 152.59 59357000 0 59357000 0 0 0 0 0 0 0 0 0 0 0 0 0 16002 2071 14576 133770;133771 106511;106512 106511 2 FEVAQVESLR Unmodified 1176.6139 0.61388734 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 68.766 68.911 2 0.0026644 79090 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 81.338 42.788 49272000 0 0 0 0 3417000 0 0 0 0 10841000 0 9618300 0 8032600 17363000 16003 965 14577 133772;133773;133774;133775;133776 106513;106514;106515;106516 106516 4 FEVITNNR Unmodified 991.50869 0.50869399 3944 Q96P48 ARAP1 Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 39.246 39.431 2 0.013245 42608 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.789 36.909 27620000 0 0 0 0 3822100 4617400 3601100 0 0 0 3501800 0 0 3837200 8239900 16004 3944 14578 133777;133778;133779;133780;133781;133782 106517;106518;106519;106520 106519 4 FEVLYCGK Unmodified 1014.4845 0.48445308 398 O60343 TBC1D4 TBC1 domain family member 4 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.12 2.32 1 7 1 1 1 1 1 1 1 1 56.478 56.109 2 0.015415 63715 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 68.915 58.836 24148000 0 1067500 0 0 0 2291200 0 1799500 1823700 0 4379600 4873100 4120600 3792900 0 16005 398 14579 133783;133784;133785;133786;133787;133788;133789;133790 106521;106522;106523;106524;106525 106525 5 FEVQGLQPNGEEMTLK Oxidation (M) 1834.8771 0.87711426 1137 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 1 0 By matching By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 69.229 69.478 2 0.0027781 79779 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 43.628 31.415 12747000 0 0 0 0 0 1656100 0 0 0 0 0 3418000 0 2051800 5621100 16006 1137 14580 133791;133792;133793;133794 106526;106527 106527 1632 1 FEVSSASNAQTR Unmodified 1295.6106 0.61059288 3200 Q86XX4 FRAS1 Extracellular matrix protein FRAS1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 22.767 22.977 2 0.042265 23479 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 44.318 21.676 3514900000 0 0 0 0 183950000 375930000 157460000 0 0 572220000 335050000 825650000 545540000 519050000 0 16007 3200 14581 133795;133796;133797;133798;133799;133800;133801;133802 106528 106528 1 FFADLLDYIK Unmodified 1243.6489 0.64887587 729 P00492 HPRT1 Hypoxanthine-guanine phosphoribosyltransferase yes yes 0 0 0 By MS/MS 2 0 1 1 99.615 91.484 2 0.011495 117927 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.928 56.595 5217500 5217500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16008 729 14582 133803 106529 106529 1 FFALAAVNQK Unmodified 1107.6077 0.60767975 5041 Q9UNS1 TIMELESS Protein timeless homolog yes yes 0 0 0 By MS/MS 10 0 1 1 72.578 72.948 2 0.0069897 83484 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 97.033 73.458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16009 5041 14583 133804 106530 106530 1 FFCSYSEPHYIK Unmodified 1576.7021 0.70205043 5275 Q9Y6B7 AP4B1 AP-4 complex subunit beta-1 yes yes 0 0 0 By MS/MS 2 0 1 1 69.897 61.612 3 0.0064363 82171 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 41.48 36.679 12050000 12050000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16010 5275 14584 133805 106531 106531 1 FFDANYDGK Unmodified 1075.4611 0.4610751 2564 Q15691;Q9UPY8 MAPRE1;MAPRE3 Microtubule-associated protein RP/EB family member 1;Microtubule-associated protein RP/EB family member 3 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.18 3.82 6 11 2 3 1 1 1 1 1 1 1 1 1 1 1 1 47.79 45.7 2 0.0016692 56139 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.15 125.23 1375700000 87269000 893470000 36974000 12217000 12170000 38045000 23758000 17369000 12522000 49124000 46635000 0 31114000 28073000 86989000 16011 2564 14585 133806;133807;133808;133809;133810;133811;133812;133813;133814;133815;133816;133817;133818;133819;133820;133821;133822 106532;106533;106534;106535;106536;106537;106538;106539;106540;106541;106542;106543;106544;106545;106546 106536 14 FFDDPMLLELAK Oxidation (M) 1453.7163 0.71630351 2481 Q15029 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 89.887 88.629 2 8.0581E-13 107676 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 157.24 143.89 208620000 23025000 86274000 13877000 0 4767700 7510300 3343100 5961600 7006600 10231000 8512400 9000500 0 7111700 22000000 16012 2481 14586 133823;133824;133825;133826;133827;133828;133829;133830;133831;133832;133833;133834;133835;133836 106547;106548;106549;106550;106551;106552;106553;106554;106555;106556;106557;106558;106559;106560 106556 4088 11 FFDDPMLLELAK Unmodified 1437.7214 0.72138888 2481 Q15029 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 4 3.46 3 1 1 1 1 1 96.686 92.886 2 1.3163E-05 116098 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.39 96.772 164840000 51138000 105090000 5307400 0 0 0 0 0 0 0 0 0 0 0 3302600 16013 2481 14586 133837;133838;133839;133840 106561;106562;106563 106563 3 FFDEESYSLLRK Unmodified 1532.7511 0.75110911 1659 P51571 SSR4 Translocon-associated protein subunit delta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 73.577 73.686 3 7.3763E-05 84886 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.326 69.71 102870000 0 0 0 7380100 0 17909000 5949000 11375000 11491000 0 8095200 12109000 0 7926000 20640000 16014 1659 14587 133841;133842;133843;133844;133845;133846;133847;133848;133849 106564;106565;106566;106567;106568 106568 5 FFEAQIPK Unmodified 978.51747 0.51746776 3267 Q8IXW5 RPAP2 Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 63.313 63.521 2 0.047391 72697 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 47.849 30.154 31093000 0 0 0 0 0 5479200 4265100 0 0 0 0 0 6193400 6910700 8244900 16015 3267 14588 133850;133851;133852;133853;133854 106569 106569 1 FFEDYGLFMR Oxidation (M) 1339.5907 0.59070906 2210 Q12931 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 83.426 83.495 2 0.0081042 96664 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 52.716 40.649 28152000 0 0 0 0 766740 5446600 0 4122900 0 7556100 3950800 6308500 0 0 0 16016 2210 14589 133855;133856;133857;133858;133859;133860 106570;106571 106570 3599 2 FFEEPEDPSSR Unmodified 1338.5728 0.57281039 2847 Q66LE6 PPP2R2D Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform yes yes 0 0 0 By matching By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 47.386 47.78 2 0.012798 53689 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 47.187 35.584 19005000 0 0 0 0 0 0 0 2671300 0 0 4712600 0 0 3885600 7735200 16017 2847 14590 133861;133862;133863;133864 106572;106573 106573 2 FFEEVLLFEDELHDHGVSSLSVK Unmodified 2675.3119 0.31189825 529 O75663 TIPRL TIP41-like protein yes yes 0 0 0 By MS/MS 1.5 0.5 1 1 2 104.14 102.7 3;4 5.7222E-56 117152 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 129.32 122.22 50299000 50299000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16018 529 14591 133865;133866 106574;106575 106575 2 FFEEVNDPAK Unmodified 1194.5557 0.55570376 1591 P49748 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.093 51.243 2 0.0006507 57831 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 122.13 105.17 513170000 0 0 0 39102000 25178000 31174000 24836000 31502000 30136000 48333000 73054000 61283000 42313000 26683000 79573000 16019 1591 14592 133867;133868;133869;133870;133871;133872;133873;133874;133875;133876;133877;133878 106576;106577;106578;106579;106580;106581;106582;106583;106584;106585;106586;106587;106588;106589;106590 106577 15 FFEFGSLDQK Unmodified 1216.5764 0.57643921 3479 Q8TB72 PUM2 Pumilio homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 79.35 79.463 2 0.0094732 91023 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 57.708 31.603 17485000 0 0 0 0 0 0 3455700 0 0 5601600 0 0 3905100 4522600 0 16020 3479 14593 133879;133880;133881;133882 106591;106592;106593 106592 3 FFEFGSLEQK Unmodified 1230.5921 0.59208927 2425 Q14671 PUM1 Pumilio homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 79.853 79.715 2 0.00021647 91940 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 141.2 128.57 158570000 0 0 7309700 7368800 6241200 12361000 7858500 15576000 8940800 14064000 11757000 17823000 12381000 10707000 26184000 16021 2425 14594 133883;133884;133885;133886;133887;133888;133889;133890;133891;133892;133893;133894;133895 106594;106595;106596;106597;106598;106599;106600;106601;106602;106603;106604;106605;106606 106600 13 FFEHFIEGGR Unmodified 1237.588 0.58800695 3840 Q96FW1 OTUB1 Ubiquitin thioesterase OTUB1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 68.112 68.38 3 0.013047 78622 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 40.589 30.066 29199000 0 0 0 0 0 5540400 0 0 0 0 0 3983200 0 4115900 15560000 16022 3840 14595 133896;133897;133898;133899 106607 106607 1 FFEILSPVYR Unmodified 1269.6758 0.67575932 2114 Q05397 PTK2 Focal adhesion kinase 1 yes yes 0 0 0 By MS/MS 10 0 1 1 87.808 87.958 2 0.0048745 101795 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.223 42.824 1500900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1500900 16023 2114 14596 133900 106608 106608 1 FFEMIENHPLSTK Oxidation (M) 1607.7654 0.76537896 623 O95155 UBE4B Ubiquitin conjugation factor E4 B yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 68.975 62.97 3 0.00049869 83947 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.457 78.98 40731000 36928000 0 3803800 0 0 0 0 0 0 0 0 0 0 0 0 16024 623 14597 133901;133902 106609;106610 106610 761 2 FFENRANGQSK Unmodified 1296.6211 0.62109799 2620 Q16630 CPSF6 Cleavage and polyadenylation specificity factor subunit 6 yes yes 0 0 1 By MS/MS 2 0 2 2 22.902 18.006 2;3 0.00050531 25790 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 128.81 80.387 62862000 62862000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16025 2620 14598 133903;133904 106611;106612 106612 0 FFENYNQSLEK Unmodified 1417.6514 0.65139506 2947 Q6PGP7 TTC37 Tetratricopeptide repeat protein 37 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.6 3.67 3 7 1 1 1 1 1 1 2 1 1 60.157 58.54 2 4.1363E-09 74472 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 164.85 150.18 150090000 6478600 119420000 0 0 0 3506800 2437600 3019400 0 4684100 0 0 0 3152400 7385000 16026 2947 14599 133905;133906;133907;133908;133909;133910;133911;133912;133913;133914 106613;106614;106615;106616;106617;106618;106619;106620;106621;106622 106617 10 FFEQLDQIEK Unmodified 1295.6398 0.63976774 137 O00268 TAF4 Transcription initiation factor TFIID subunit 4 yes yes 0 0 0 By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.329 75.388 2 0.0014535 86486 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 120.12 106.85 43175000 0 0 0 2521000 1967600 4113500 3554600 2970100 2702100 4359300 3665000 5394800 2850800 2343000 6733200 16027 137 14600 133915;133916;133917;133918;133919;133920;133921;133922;133923;133924;133925;133926 106623;106624;106625;106626;106627 106625 5 FFETSAK Unmodified 828.40177 0.4017693 1830;1649 P51153;P61026 RAB13;RAB10 Ras-related protein Rab-13;Ras-related protein Rab-10 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 27.854 28.054 2 0.02333 30075 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 90.986 71.139 1567700000 0 0 0 92325000 128190000 107420000 131590000 0 98371000 162860000 217940000 190360000 127090000 130030000 181520000 16028 1649;1830 14601 133927;133928;133929;133930;133931;133932;133933;133934;133935;133936;133937 106628;106629;106630;106631;106632;106633 106628 6 FFFDPSAR Unmodified 985.46577 0.46576654 1802 P58107 EPPK1 Epiplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 74.053 74.088 2 0.032055 85385 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 54.549 38.917 42749000 0 0 0 4862600 3153700 3956600 3648400 4186900 3754800 4121300 3094800 5624300 3349700 2996200 0 16029 1802 14602 133938;133939;133940;133941;133942;133943;133944;133945;133946;133947;133948 106634;106635 106634 2 FFFDVGSNK Unmodified 1059.5025 0.50254598 2038 Q00577 PURA Transcriptional activator protein Pur-alpha yes yes 0 0 0 By MS/MS 10 0 1 1 77.397 76.924 2 0.040497 89290 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 44.377 32.866 1161300 0 0 0 1161300 0 0 0 0 0 0 0 0 0 0 0 16030 2038 14603 133949 106636 106636 1 FFFNPSAVSQR Unmodified 1298.6408 0.6407708 9 A1L390 PLEKHG3 Pleckstrin homology domain-containing family G member 3 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 77.853 77.919 2 0.038571 90109 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 37.065 19.968 31117000 0 0 0 3186200 0 3975300 2606500 0 3152800 4552400 3184900 0 3603200 0 6855200 16031 9 14604 133950;133951;133952;133953;133954;133955;133956;133957 106637;106638 106638 2 FFGDSAASMAIK Unmodified 1243.5907 0.59070906 5206 Q9Y4L1 HYOU1 Hypoxia up-regulated protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 71.966 72.055 2 2.5886E-05 82138 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.48 79.575 48176000 0 0 0 0 1473000 5216200 1864800 0 0 3764600 5494300 0 0 5709500 24653000 16032 5206 14605 133958;133959;133960;133961;133962;133963;133964 106639;106640;106641;106642;106643;106644 106642 6 FFGDSAASMAIK Oxidation (M) 1259.5856 0.58562368 5206 Q9Y4L1 HYOU1 Hypoxia up-regulated protein 1 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 57.963 58.273 2 0.0023435 65440 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.064 52.021 35558000 0 0 0 0 0 0 0 0 0 6344600 9709800 0 5702300 5691900 8109600 16033 5206 14605 133965;133966;133967;133968;133969 106645;106646;106647 106645 6603 3 FFGGYVPEMVLTPDDQR Oxidation (M) 1985.9193 0.91931342 1779 P56192 MARS Methionine--tRNA ligase, cytoplasmic yes yes 0 1 0 By MS/MS 10 0 1 1 84.055 84.234 2 0.0001264 97187 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.44 60.03 5240500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5240500 16034 1779 14606 133970 106648 106648 2904 1 FFGNLMDASK Oxidation (M) 1144.5223 0.52229515 1380 P36871 PGM1 Phosphoglucomutase-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.4 3.86 5 2 8 3 2 2 2 2 2 2 57.801 55.381 2 0.0021647 69152 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 104.2 89.047 1209600000 678710000 172220000 237840000 0 0 0 0 0 0 0 25876000 25554000 0 17365000 52008000 16035 1380 14607 133971;133972;133973;133974;133975;133976;133977;133978;133979;133980;133981;133982;133983;133984;133985 106649;106650;106651;106652;106653;106654;106655;106656;106657;106658;106659;106660;106661 106659 2140 11 FFGNLMDASK Unmodified 1128.5274 0.52738052 1380 P36871 PGM1 Phosphoglucomutase-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.83 3.67 3 1 2 1 2 1 1 1 77.91 73.133 2 0.002199 89443 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 107.15 94.327 1538400000 853690000 586900000 97828000 0 0 0 0 0 0 0 0 0 0 0 0 16036 1380 14607 133986;133987;133988;133989;133990;133991 106662;106663;106664;106665;106666;106667;106668 106667 6 FFGVIPSGK Unmodified 950.52255 0.52255314 1349 P35251 RFC1 Replication factor C subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.113 71.187 2 0.0071283 81912 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 73.248 62.027 66162000 0 0 0 4505700 4655300 4584100 3878500 4286700 4653700 5762500 7471200 7261300 5492100 5115900 8494900 16037 1349 14608 133992;133993;133994;133995;133996;133997;133998;133999;134000;134001;134002;134003 106669;106670;106671;106672;106673;106674 106671 6 FFIDQSK Unmodified 883.44397 0.44396847 2210 Q12931 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 47.645 47.846 2 0.040205 54165 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 68.7 45.391 125870000 0 0 0 0 11244000 20073000 0 17774000 0 20227000 14887000 14917000 16103000 10645000 0 16038 2210 14609 134004;134005;134006;134007;134008;134009;134010;134011 106675 106675 1 FFILQNR Unmodified 936.51814 0.51813647 392 O60293 ZFC3H1 Zinc finger C3H1 domain-containing protein yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 70.886 71.046 2 0.041694 80917 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.033 38.695 12254000 0 0 0 0 0 2171800 1656400 0 0 1748600 0 0 1474600 1999800 3203100 16039 392 14610 134012;134013;134014;134015;134016;134017 106676 106676 1 FFLEDPTGTVQLDLSK Unmodified 1808.9196 0.919631 1782 P56282 POLE2 DNA polymerase epsilon subunit 2 yes yes 0 0 0 By MS/MS 2 0 1 1 94.843 89.979 2 7.4535E-11 111549 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 111.39 100.29 13533000 0 13533000 0 0 0 0 0 0 0 0 0 0 0 0 0 16040 1782 14611 134018 106677 106677 1 FFLGDLCSR Unmodified 1113.5277 0.52771487 2569 Q15738 NSDHL Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 79.155 79.243 2 0.019553 91598 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 53.878 44.485 50138000 0 0 0 0 2773900 4657900 0 0 5315300 4302800 4561500 12028000 5551400 5823000 5124400 16041 2569 14612 134019;134020;134021;134022;134023;134024;134025;134026;134027 106678;106679 106679 2 FFLIEEK Unmodified 924.49567 0.49566969 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75.524 74.811 2 0.029674 96654 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.407 70.435 139990000 13623000 0 19468000 4877100 6863300 9401400 6247200 9102800 8168700 10211000 9169700 10649000 8063400 10278000 13868000 16042 5189 14613 134028;134029;134030;134031;134032;134033;134034;134035;134036;134037;134038;134039;134040;134041 106680;106681;106682;106683;106684;106685;106686;106687;106688 106684 9 FFLLENVR Unmodified 1036.5706 0.57056597 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 83.604 83.613 2 0.037577 96892 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.335 37.828 32981000 0 0 0 1314900 768730 3882700 0 0 3148700 6369700 4385700 0 0 0 13110000 16043 1201 14614 134042;134043;134044;134045;134046;134047;134048 106689 106689 1 FFMGNQVLK Oxidation (M) 1098.5532 0.55320134 974 P13010 XRCC5 X-ray repair cross-complementing protein 5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 16 2 1 1 2 1 1 1 1 1 1 2 2 55.602 55.716 2 0.0045153 62731 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.975 39.802 252420000 0 0 0 21846000 7434300 15618000 23996000 8433700 9486400 18721000 16236000 22760000 15728000 32491000 59673000 16044 974 14615 134049;134050;134051;134052;134053;134054;134055;134056;134057;134058;134059;134060;134061;134062;134063;134064 106690;106691;106692;106693;106694;106695;106696;106697;106698;106699;106700;106701;106702 106700 1295 12 FFMGNQVLK Unmodified 1082.5583 0.55828672 974 P13010 XRCC5 X-ray repair cross-complementing protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.341 71.414 2 0.013982 81954 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 58.981 49.393 283590000 0 0 0 10865000 8517700 20896000 10672000 18864000 10650000 20217000 27938000 37406000 16667000 27649000 73252000 16045 974 14615 134065;134066;134067;134068;134069;134070;134071;134072;134073;134074;134075;134076 106703;106704;106705;106706;106707;106708;106709;106710 106706 8 FFMGTVVK Unmodified 927.48881 0.48881017 1522 P47712 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 70.607 68.882 2 0.013906 78470 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 71.342 50.358 343830000 205430000 0 28654000 17765000 20253000 26617000 19814000 0 25298000 0 0 0 0 0 0 16046 1522 14616 134077;134078;134079;134080;134081;134082;134083;134084;134085;134086;134087 106711;106712;106713;106714;106715;106716;106717;106718;106719 106712 9 FFMGTVVK Oxidation (M) 943.48372 0.48372479 1522 P47712 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 49.325 49.511 2 0.016831 55709 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 58.604 33.973 370900000 0 0 0 26031000 0 39247000 0 45841000 0 59163000 29423000 87730000 49779000 33685000 0 16047 1522 14616 134088;134089;134090;134091;134092;134093;134094;134095;134096 106720;106721;106722;106723;106724 106720 2415 5 FFNEDGVIRPYR Unmodified 1511.7521 0.75211216 3970 Q96RL7 VPS13A Vacuolar protein sorting-associated protein 13A yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 65.894 66.049 3 0.0069791 76154 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 46.592 38.868 41746000 0 0 0 0 1571400 4002500 2158400 3767400 3335800 3302100 2875000 5316800 5685100 2936400 6795100 16048 3970 14617 134097;134098;134099;134100;134101;134102;134103;134104;134105;134106;134107 106725;106726 106726 2 FFNVLTTNTDGK Unmodified 1355.6721 0.67213051 3667 Q92820 GGH Gamma-glutamyl hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 74.909 73.728 2 1.5303E-14 85751 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 160.36 151.42 351800000 92526000 51351000 10447000 0 11873000 16381000 10458000 19834000 10194000 20539000 25315000 26234000 17197000 15818000 23635000 16049 3667 14618 134108;134109;134110;134111;134112;134113;134114;134115;134116;134117;134118;134119;134120;134121;134122;134123 106727;106728;106729;106730;106731;106732;106733;106734;106735;106736;106737;106738;106739;106740;106741;106742;106743;106744;106745;106746 106745 18 FFPASADR Unmodified 909.43447 0.43446642 838 P07237 P4HB Protein disulfide-isomerase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 39.196 39.391 2 0.0068947 43342 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 91.9 70.198 249280000 0 0 0 10456000 12536000 0 0 0 7925800 15453000 48150000 35759000 0 26869000 92131000 16050 838 14619 134124;134125;134126;134127;134128;134129;134130;134131 106747;106748;106749;106750;106751 106749 5 FFPASADRTVIDYNGER Unmodified 1956.933 0.93298965 838 P07237 P4HB Protein disulfide-isomerase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 69.665 69.824 3 0.0009406 79248 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.593 34.857 82389000 0 0 0 0 1763100 0 0 4254500 3699800 4021100 11241000 13251000 4519500 7201900 32437000 16051 838 14620 134132;134133;134134;134135;134136;134137;134138;134139;134140 106752;106753;106754 106752 3 FFPASFPNR Unmodified 1081.5345 0.53451481 3491 Q8TCT9 HM13 Minor histocompatibility antigen H13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 71.213 71.199 2 0.021923 81818 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.854 40.086 40382000 0 0 0 6294100 3500300 4774300 4486200 3647800 3222900 4069100 0 10388000 0 0 0 16052 3491 14621 134141;134142;134143;134144;134145;134146;134147;134148 106755;106756;106757;106758 106755 4 FFPLESWQIGK Unmodified 1350.6972 0.69722304 1264 P30046 DDT D-dopachrome decarboxylase yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 89.541 89.699 2 0.00042721 104031 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.676 75.895 32442000 0 0 0 0 0 0 0 0 0 0 4108100 2023800 0 0 26310000 16053 1264 14622 134149;134150;134151 106759 106759 1 FFPLIEVNK Unmodified 1105.6172 0.61718181 1221 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 85.442 84.324 2 0.0049392 97829 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 85.212 74.52 1107200000 508800000 211680000 82853000 9932400 10060000 39221000 22199000 20331000 17715000 37296000 24786000 31754000 13904000 22024000 54615000 16054 1221 14623 134152;134153;134154;134155;134156;134157;134158;134159;134160;134161;134162;134163;134164;134165;134166;134167 106760;106761;106762;106763;106764;106765;106766;106767;106768;106769;106770;106771;106772;106773;106774;106775;106776;106777;106778;106779;106780 106777 20 FFQEENTEK Unmodified 1170.5193 0.51931826 130 O00232 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.4 3.68 4 1 10 1 3 1 1 1 1 1 1 1 1 1 1 1 29.071 27.75 2 2.5854E-06 35927 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 157.86 157.86 1476100000 34586000 716540000 8469400 56480000 0 78828000 0 33006000 26332000 114200000 149660000 120190000 34614000 31213000 72019000 16055 130 14624 134168;134169;134170;134171;134172;134173;134174;134175;134176;134177;134178;134179;134180;134181;134182 106781;106782;106783;106784;106785;106786;106787;106788;106789;106790;106791;106792;106793;106794;106795;106796;106797;106798;106799;106800 106788 19 FFQELFDSELASQATAEFEK Unmodified 2336.0849 0.084858427 1421 P40855 PEX19 Peroxisomal biogenesis factor 19 yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 97.962 92.243 3 1.3571E-10 116480 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.216 62.118 23045000 20165000 2880200 0 0 0 0 0 0 0 0 0 0 0 0 0 16056 1421 14625 134183;134184 106801;106802;106803 106803 3 FFQELPGSDPVFK Unmodified 1509.7504 0.75038083 2940 Q6P996;Q6P474 PDXDC1;PDXDC2P Pyridoxal-dependent decarboxylase domain-containing protein 1;Putative pyridoxal-dependent decarboxylase domain-containing protein 2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.827 81.888 2 7.5564E-05 94683 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 108.47 95.378 561430000 0 0 0 17217000 23214000 54895000 32146000 45977000 40251000 71151000 44691000 70334000 35178000 45052000 81323000 16057 2940 14626 134185;134186;134187;134188;134189;134190;134191;134192;134193;134194;134195;134196 106804;106805;106806;106807;106808;106809;106810;106811;106812;106813;106814;106815 106805 11 FFQELSK Unmodified 897.45962 0.45961853 3907 Q96KG9 SCYL1 N-terminal kinase-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 47.033 47.539 2 0.031266 53429 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 73.975 48.081 98043000 0 0 0 0 0 0 0 0 0 0 34725000 39999000 23319000 0 0 16058 3907 14627 134197;134198;134199 106816;106817;106818 106817 3 FFQGMPEK Unmodified 982.45824 0.45823833 1474 P43246 MSH2 DNA mismatch repair protein Msh2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 48.23 48.592 2 0.010495 53712 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.469 62.921 32773000 0 0 0 0 0 0 0 4406000 0 0 0 0 4707800 7911700 15747000 16059 1474 14628 134200;134201;134202;134203 106819;106820;106821 106819 3 FFQGMPEKPTTTVR Oxidation (M) 1653.8185 0.81847717 1474 P43246 MSH2 DNA mismatch repair protein Msh2 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 42.153 42.377 3 0.00054375 47374 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 57.034 49.976 217460000 0 0 0 0 17443000 0 0 16240000 12773000 30089000 38179000 45343000 29350000 28046000 0 16060 1474 14629 134204;134205;134206;134207;134208;134209;134210;134211 106822;106823;106824;106825 106824 2318 2 FFQGMPEKPTTTVR Unmodified 1637.8236 0.82356254 1474 P43246 MSH2 DNA mismatch repair protein Msh2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 56.437 56.533 3 0.0029358 65047 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 40.941 34.778 170690000 0 0 0 13026000 10007000 0 15938000 16495000 0 21905000 0 19731000 15931000 15668000 41996000 16061 1474 14629 134212;134213;134214;134215;134216;134217;134218;134219;134220 106826;106827;106828;106829;106830 106830 5 FFQSTGSLK Unmodified 1013.5182 0.51819605 1106 P20585 MSH3 DNA mismatch repair protein Msh3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 6 1 1 1 1 1 1 43.092 43.428 2 0.017806 48757 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 55.37 4.6666 33465000 0 0 0 0 0 7053300 0 5084200 0 0 7941200 0 0 4406300 8979700 16062 1106 14631 134221;134222;134223;134224;134225;134226 106831;106832;106833;106834 106833 4 FFQTACDVPELQDK Unmodified 1696.7767 0.77667193 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 20 2 2 2 2 2 2 1 1 1 1 2 2 72.96 72.999 2;3 2.3476E-201 83451 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 231.92 205.87 1129600000 0 0 0 110950000 138790000 206320000 99485000 100460000 100760000 6542900 6480300 5647300 6247300 144180000 203700000 16063 1518 14632 134227;134228;134229;134230;134231;134232;134233;134234;134235;134236;134237;134238;134239;134240;134241;134242;134243;134244;134245;134246 106835;106836;106837;106838;106839;106840;106841;106842;106843;106844;106845;106846 106837 11 FFQTPEGLSHGIQMEPVDLTVNK Oxidation (M) 2602.2737 0.2737386 1795 P57682 KLF3 Krueppel-like factor 3 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 80.781 80.935 3 4.607E-21 93549 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 89.028 80.74 44030000 0 0 0 0 0 0 0 0 0 13988000 8350600 0 0 4229100 17462000 16064 1795 14633 134247;134248;134249;134250 106847;106848;106849 106847 2914 3 FFRNGDTASPK Unmodified 1238.6044 0.60438529 838 P07237 P4HB Protein disulfide-isomerase yes yes 0 0 1 By MS/MS 2 0 1 1 28.574 23.055 3 1.6882E-09 32755 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 121.02 109.81 625350000 625350000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16065 838 14634 134251 106850;106851 106851 2 FFSEQQQSK Unmodified 1127.5247 0.52473799 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.368 23.572 2 1.293E-08 24075 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 160.11 147.07 265000000 0 0 0 13563000 13248000 12259000 17284000 16591000 11351000 28495000 28781000 40374000 31633000 21075000 30342000 16066 5216 14635 134252;134253;134254;134255;134256;134257;134258;134259;134260;134261;134262;134263 106852;106853;106854;106855;106856;106857;106858;106859;106860;106861;106862;106863 106857 11 FFSGYGR Unmodified 832.38679 0.38678794 2260 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 40.382 40.576 2 0.042347 45055 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 67.741 52.804 168710000 0 0 0 9874700 10283000 0 13650000 0 10847000 16108000 20623000 18366000 17161000 16479000 35315000 16067 2260 14636 134264;134265;134266;134267;134268;134269;134270;134271;134272;134273 106864;106865 106865 2 FFSLSSVDK Unmodified 1028.5179 0.51786169 5208 Q9Y4P8 WIPI2 WD repeat domain phosphoinositide-interacting protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.4 3.2 1 4 1 1 1 1 1 71.55 70.759 2 0.025718 89760 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.256 46.235 62270000 0 46251000 0 0 0 5061400 0 0 0 0 3267100 0 0 2774300 4916000 16068 5208 14637 134274;134275;134276;134277;134278 106866;106867 106866 2 FFSSQIPSSVNK Unmodified 1339.6772 0.67721588 2653 Q2NKX8 ERCC6L DNA excision repair protein ERCC-6-like yes yes 0 0 0 By MS/MS 10 0 1 1 60.7 60.893 2 0.034273 68640 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 50.034 34.773 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16069 2653 14638 134279 106868 106868 1 FFTDDLFQYAGEK Unmodified 1579.7195 0.71947463 2908 Q6NYC1 JMJD6 Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.25 3.7 3 2 3 2 2 1 1 1 1 90.46 87.681 2 2.5907E-09 102353 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 114.83 102.97 179800000 32513000 138400000 0 0 0 1318000 0 0 0 0 0 1555100 0 0 6019600 16070 2908 14639 134280;134281;134282;134283;134284;134285;134286;134287 106869;106870;106871;106872;106873 106870 5 FFTGSLAEVEK Unmodified 1226.6183 0.61830402 2229 Q13049 TRIM32 E3 ubiquitin-protein ligase TRIM32 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71.598 71.105 2 1.8252E-06 87256 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 121.73 70.387 138820000 0 67696000 9889800 3033900 3361200 4326200 5414200 3300800 3318300 4315500 5954000 6309400 7938400 4590600 9373700 16071 2229 14640 134288;134289;134290;134291;134292;134293;134294;134295;134296;134297;134298;134299;134300;134301 106874;106875;106876;106877;106878;106879;106880;106881;106882;106883 106879 10 FFTNFESRK Unmodified 1174.5771 0.57710791 4681 Q9NVS9 PNPO Pyridoxine-5'-phosphate oxidase yes yes 0 0 1 By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 47.894 48.148 3 0.016438 52936 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.652 23.076 35085000 0 0 0 0 1713600 1636100 0 1815100 0 3159700 7158000 5806500 0 0 13796000 16072 4681 14641 134302;134303;134304;134305;134306;134307;134308 106884 106884 1 FFTPAIR Unmodified 850.47012 0.47012364 3505 Q8TDP1 RNASEH2C Ribonuclease H2 subunit C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 63.4 63.688 2 0.027575 71960 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.374 26.338 44343000 0 0 0 0 0 4509700 0 4165500 0 0 7927000 9807500 0 5373700 12560000 16073 3505 14642 134309;134310;134311;134312;134313;134314 106885;106886 106886 2 FFTQCDILPK Unmodified 1267.6271 0.62709457 3704 Q93034 CUL5 Cullin-5 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 79.886 76.22 2 0.017663 94802 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.299 34.926 31233000 0 27952000 3281600 0 0 0 0 0 0 0 0 0 0 0 0 16074 3704 14643 134315;134316 106887 106887 1 FFTQPDK Unmodified 881.42832 0.42831841 4633 Q9NTI5 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 32.687 32.722 2 0.031266 36328 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 73.975 61.714 38263000 0 0 0 5906200 4398500 7144100 4769600 3401700 2651100 0 5431100 0 0 4560400 0 16075 4633 14644 134317;134318;134319;134320;134321;134322;134323;134324 106888;106889 106889 2 FFTQPEK Unmodified 895.44397 0.44396847 2647 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 33.058 33.231 2 0.030779 36344 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 74.423 61.87 191370000 0 0 0 13884000 9777200 16759000 15767000 13711000 11037000 23272000 16971000 29218000 15394000 0 25579000 16076 2647 14645 134325;134326;134327;134328;134329;134330;134331;134332;134333;134334;134335 106890 106890 1 FFTSSTSLTLK Unmodified 1230.6496 0.64960415 4023 Q99567 NUP88 Nuclear pore complex protein Nup88 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 72.749 72.857 2 0.011696 83959 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 48.283 32.651 46667000 0 0 0 0 3582000 4529900 2699100 6594600 4888000 7545200 4839000 0 0 4070500 7918900 16077 4023 14646 134336;134337;134338;134339;134340;134341;134342;134343;134344 106891;106892;106893;106894;106895;106896 106891 6 FFVAPFPEVFGK Unmodified 1383.7227 0.72270951 59 CON__P02662 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 95.356 95.432 2 9.6773E-05 110770 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 98.044 93.578 + 358290000 0 0 0 10482000 15142000 52898000 17150000 31893000 27613000 43121000 35242000 26763000 8942200 18316000 70725000 16078 59 14647 134345;134346;134347;134348;134349;134350;134351;134352;134353;134354;134355;134356 106897;106898;106899;106900;106901;106902;106903;106904;106905;106906;106907;106908;106909;106910;106911;106912;106913;106914;106915;106916;106917;106918;106919 106898 23 FFVAVPGQVISPQSSSSGTDLTGDK Unmodified 2523.2493 0.24929799 391 O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.56 1 1 13 2 1 1 1 1 2 2 2 1 2 86.166 85.684 2;3 3.8951E-66 105762 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.12 119.1 138860000 0 66257000 0 0 2834800 5302200 0 0 3271200 11446000 11139000 11331000 0 4825800 22455000 16079 391 14648 134357;134358;134359;134360;134361;134362;134363;134364;134365;134366;134367;134368;134369;134370;134371 106920;106921;106922;106923;106924;106925;106926;106927;106928;106929;106930;106931;106932;106933;106934;106935 106923 16 FFVGGNWK Unmodified 953.47594 0.4759373 1808 P60174 TPI1 Triosephosphate isomerase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.91 3.42 2 1 8 2 1 1 1 1 1 1 1 1 1 70.28 69.514 2 0.0058497 78780 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 105.27 70.068 791320000 1838400 84033000 0 19025000 0 0 3429600 0 1970700 0 91270000 117440000 3774800 81062000 387470000 16080 1808 14649 134372;134373;134374;134375;134376;134377;134378;134379;134380;134381;134382 106936;106937;106938;106939;106940;106941;106942;106943 106938 6 FFVGPEDTEINPGNYR Unmodified 1853.8584 0.85842773 317 O43314 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 79.807 79.888 2 3.0017E-28 92139 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 121.08 104.7 32947000 0 0 0 0 2334800 3879000 2325000 3032600 0 5191800 5040500 4798500 2024800 4319900 0 16081 317 14650 134383;134384;134385;134386;134387;134388;134389;134390;134391;134392 106944;106945;106946;106947;106948;106949;106950;106951;106952;106953 106947 10 FFVSSSQGR Unmodified 1013.493 0.49304393 1362 P35613 BSG Basigin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 36.795 37.048 2 0.0051376 41291 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 82.452 70.548 190380000 0 0 0 14559000 0 23124000 0 23630000 17047000 0 28890000 42905000 0 0 40221000 16082 1362 14651 134393;134394;134395;134396;134397;134398;134399 106954;106955;106956;106957 106954 3 FFWGNAETLK Unmodified 1211.5975 0.597509 375 O43847 NRD1 Nardilysin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 3 9 1 1 1 1 1 1 1 1 1 1 1 1 80.051 78.785 2 9.316E-06 99026 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.06 99.301 240530000 97448000 30612000 17856000 3538600 2854600 7685000 0 0 0 13184000 9473600 12593000 9732300 9683800 25867000 16083 375 14652 134400;134401;134402;134403;134404;134405;134406;134407;134408;134409;134410;134411 106958;106959;106960;106961;106962;106963;106964;106965;106966 106959 9 FFYAGTPPAGLAADSHVK Unmodified 1847.9206 0.92063405 605 O94919 ENDOD1 Endonuclease domain-containing 1 protein yes yes 0 0 0 By MS/MS 10 0 1 1 73.764 73.216 3 0.03125 84844 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 24.594 18.934 9120300 0 0 0 9120300 0 0 0 0 0 0 0 0 0 0 0 16084 605 14653 134412 106967 106967 1 FGALTAEK Unmodified 835.44397 0.44396847 648 O95372 LYPLA2 Acyl-protein thioesterase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.634 32.819 2 0.012186 35925 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 75.213 47.106 193940000 0 0 0 12724000 10292000 30024000 12585000 11499000 8724300 19720000 16108000 10752000 34290000 13738000 13485000 16085 648 14654 134413;134414;134415;134416;134417;134418;134419;134420;134421;134422;134423;134424 106968;106969;106970;106971;106972;106973 106969 5 FGAMGGGGPSAAGGGTPQPTATPTLNQLLTSPSSAR Oxidation (M) 3327.6154 0.61536727 183 O14497 ARID1A AT-rich interactive domain-containing protein 1A yes yes 0 1 0 By MS/MS 10 0 1 1 84.771 84.95 3 3.6016E-40 98117 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.612 56.682 6832200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6832200 16086 183 14655 134425 106974 106974 253 1 FGAPPHAGGGIGLER Unmodified 1434.7368 0.73679645 1009 P14868 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 50.738 50.877 3 0.00082195 56082 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.857 27.849 221550000 0 0 0 11482000 16252000 0 16967000 0 0 0 38092000 53627000 0 27502000 57632000 16087 1009 14656 134426;134427;134428;134429;134430;134431;134432;134433 106975;106976;106977;106978;106979;106980;106981 106976 7 FGAQNVAR Unmodified 861.4457 0.4456998 4739 Q9NYB0 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 yes yes 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 22.199 22.338 2 0.038808 23290 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 50.898 22.791 19107000 0 0 0 1403400 1793800 3072100 0 0 0 3551200 3994200 0 0 0 5292700 16088 4739 14657 134434;134435;134436;134437;134438;134439 106982;106983 106982 2 FGAQQDTIEVPEK Unmodified 1460.7147 0.7147236 1590 P49736 MCM2 DNA replication licensing factor MCM2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 54.526 54.657 2 2.323E-09 61221 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 115.18 96.908 204450000 0 0 0 15283000 10151000 13382000 12632000 10255000 6603800 18785000 28292000 21398000 13009000 20236000 34419000 16089 1590 14658 134440;134441;134442;134443;134444;134445;134446;134447;134448;134449;134450;134451 106984;106985;106986;106987;106988;106989;106990;106991;106992;106993;106994;106995;106996;106997;106998;106999;107000 106996 16 FGARDAASQEPK Unmodified 1275.6208 0.62076364 384 O60231 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 22.435 18.546 3 0.024699 23684 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 57.106 43.517 369350000 339070000 0 30276000 0 0 0 0 0 0 0 0 0 0 0 0 16090 384 14659 134452;134453 107001;107002 107002 1 FGATLEIVTDK Unmodified 1192.634 0.63395408 1902 P62495 ETF1 Eukaryotic peptide chain release factor subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 77.786 72.725 2 1.487E-10 91921 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 152.28 128.12 196850000 92513000 104340000 0 0 0 0 0 0 0 0 0 0 0 0 0 16091 1902 14660 134454;134455;134456;134457;134458 107003;107004;107005;107006;107007;107008;107009 107003 7 FGAVEGAVAK Unmodified 947.50763 0.50763136 4441 Q9H7Z7 PTGES2 Prostaglandin E synthase 2;Prostaglandin E synthase 2 truncated form yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35.77 35.318 2 0.0056296 45162 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.161 47.515 458680000 0 67682000 3910700 19533000 23946000 23196000 29273000 30477000 22212000 40050000 48756000 45990000 36375000 26564000 40717000 16092 4441 14661 134459;134460;134461;134462;134463;134464;134465;134466;134467;134468;134469;134470;134471;134472 107010;107011;107012;107013;107014;107015;107016;107017;107018;107019 107012 6 FGAVWTGDNTAEWDHLK Unmodified 1945.8959 0.89587586 2441 Q14697 GANAB Neutral alpha-glucosidase AB yes yes 0 0 0 By MS/MS 10 0 1 1 79.111 79.357 3 1.0917E-13 91383 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 92.773 81.13 26343000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26343000 16093 2441 14662 134473 107020 107020 1 FGAYIVDGLR Unmodified 1109.5869 0.58694431 2231;180 Q13085;O00763 ACACA;ACACB Acetyl-CoA carboxylase 1;Biotin carboxylase;Acetyl-CoA carboxylase 2;Biotin carboxylase no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.657 76.752 2 0.037957 88313 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.305 49.102 75998000 0 0 0 7450300 0 6581500 3762200 6588100 4164200 7743900 5263700 11798000 8729100 6023900 7893400 16094 2231;180 14663 134474;134475;134476;134477;134478;134479;134480;134481;134482;134483;134484 107021 107021 0 FGDLDEQEFVYK Unmodified 1488.6773 0.67727546 3933;3439 Q96N67;Q8NF50 DOCK7;DOCK8 Dedicator of cytokinesis protein 7;Dedicator of cytokinesis protein 8 no no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 75.903 75.549 2 3.431E-05 92883 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 132.57 114.23 179730000 0 95252000 0 2977400 3697500 12038000 4934700 5128900 6864600 10991000 9221400 0 6388800 8168500 14065000 16095 3933;3439 14664 134485;134486;134487;134488;134489;134490;134491;134492;134493;134494;134495;134496 107022;107023;107024;107025;107026;107027;107028;107029;107030;107031;107032 107024 10 FGDLILK Unmodified 804.47454 0.47454032 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 68.132 68.211 2 0.026498 79451 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 78.616 30.442 338880000 0 0 0 18913000 18851000 26382000 21895000 27686000 20262000 0 29594000 43521000 37538000 39821000 54419000 16096 2930 14665 134497;134498;134499;134500;134501;134502;134503;134504;134505;134506;134507 107033 107033 1 FGDMSYSIR Unmodified 1074.4804 0.48043033 2642 Q16890 TPD52L1 Tumor protein D53 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 58.016 58.211 2 0.0097334 66466 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 65.88 50.441 79065000 0 0 0 0 3147400 5794500 0 7239900 5908200 6202100 11851000 12517000 8965600 5149800 12290000 16097 2642 14666 134508;134509;134510;134511;134512;134513;134514;134515;134516;134517 107034;107035;107036;107037;107038;107039 107038 6 FGDNIEDEWFIVYVIK Unmodified 1985.9775 0.97748023 705 O95905 ECD Protein SGT1 yes yes 0 0 0 By MS/MS 2 0 1 1 101.55 93.421 2 0.00028958 120253 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 102.97 85.759 9068800 9068800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16098 705 14667 134518 107040;107041 107041 2 FGDPECQVILPLLK Unmodified 1627.8644 0.86436473 1134 P22102 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 92.021 92.143 2 0.008828 106793 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.54 28.187 1811900 0 0 0 0 0 0 0 0 0 0 0 0 0 590240 1221600 16099 1134 14668 134519;134520 107042 107042 1 FGDPVVQSDMK Unmodified 1221.57 0.56997362 908 P0DMV9;P0DMV8 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.79 1 4 1 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 54.527 53.334 2 4.6765E-09 63680 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 135.55 120.29 11869000000 429660000 8891100000 106480000 106270000 92045000 112990000 94550000 121790000 80580000 134270000 309530000 236890000 136020000 259780000 756810000 16100 908 14669 134521;134522;134523;134524;134525;134526;134527;134528;134529;134530;134531;134532;134533;134534;134535;134536;134537;134538 107043;107044;107045;107046;107047;107048;107049;107050;107051;107052;107053;107054;107055;107056;107057;107058;107059;107060;107061;107062;107063;107064;107065;107066;107067;107068;107069 107047 27 FGDPVVQSDMK Oxidation (M) 1237.5649 0.56488824 908 P0DMV9;P0DMV8 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.63 3.66 1 18 5 11 4 17 3 1 1 1 1 1 1 1 1 1 1 1 43.723 41.553 2 3.8501E-09 93917 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 130.79 116.27 9710600000 524540000 7507700000 172540000 87261000 0 96451000 106770000 89230000 74286000 102140000 182950000 231870000 112880000 135670000 286240000 16101 908 14669 134539;134540;134541;134542;134543;134544;134545;134546;134547;134548;134549;134550;134551;134552;134553;134554;134555;134556;134557;134558;134559;134560;134561;134562;134563;134564;134565;134566;134567;134568;134569;134570;134571;134572;134573 107070;107071;107072;107073;107074;107075;107076;107077;107078;107079;107080;107081;107082;107083;107084;107085;107086;107087;107088;107089;107090;107091;107092;107093;107094;107095;107096;107097;107098;107099;107100;107101;107102;107103;107104;107105;107106;107107;107108 107098 1170 37 FGDQGGFK Unmodified 854.39227 0.39226725 1600 P49790 NUP153 Nuclear pore complex protein Nup153 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27.383 26.661 2 0.0068781 28951 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 92.677 92.677 574170000 12922000 105410000 13395000 14347000 26801000 29680000 34443000 30577000 27171000 43455000 41787000 60444000 42942000 36763000 54033000 16102 1600 14670 134574;134575;134576;134577;134578;134579;134580;134581;134582;134583;134584;134585;134586;134587;134588 107109;107110;107111;107112;107113;107114;107115 107110 5 FGDSNTVMR Oxidation (M) 1041.4549 0.45494386 1029 P15924 DSP Desmoplakin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 18.361 18.433 2 0.0020087 18619 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 91.783 85.679 343220000 0 0 0 96391000 28370000 25023000 25971000 93695000 17701000 30045000 26025000 0 0 0 0 16103 1029 14671 134589;134590;134591;134592;134593;134594;134595;134596 107116;107117;107118;107119;107120;107121;107122;107123;107124;107125 107125 1430 10 FGDSNTVMR Unmodified 1025.46 0.46002924 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.807 30.996 2 0.0035332 33898 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 89.752 71.022 644940000 0 0 0 103890000 36637000 44047000 41523000 112070000 33802000 38003000 47182000 60366000 57492000 31460000 38476000 16104 1029 14671 134597;134598;134599;134600;134601;134602;134603;134604;134605;134606;134607;134608 107126;107127;107128;107129;107130;107131;107132;107133;107134;107135;107136;107137;107138 107138 13 FGDYQCNSAMGISQMLK Oxidation (M) 1964.8431 0.84305371 1733 P54136 RARS Arginine--tRNA ligase, cytoplasmic yes yes 0 1 0 By MS/MS By matching By matching By matching By MS/MS 7.5 3.55 1 1 4 2 1 1 1 1 75.949 74.634 2 5.8252E-07 88298 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.85 71.385 54074000 0 35715000 0 0 0 0 0 0 0 4097400 3060800 0 0 2575900 8624300 16105 1733 14672 134609;134610;134611;134612;134613;134614 107139;107140 107140 2810;2811 2 FGDYQCNSAMGISQMLK Unmodified 1948.8481 0.84813909 1733 P54136 RARS Arginine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.6 3.2 4 1 1 2 1 1 85.261 81.263 2;3 8.4995E-05 102775 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.43 78.881 173630000 10722000 154450000 1202100 0 0 0 0 0 0 0 0 0 0 0 7255200 16106 1733 14672 134615;134616;134617;134618;134619 107141;107142;107143;107144 107144 4 FGDYQCNSAMGISQMLK 2 Oxidation (M) 1980.838 0.83796833 1733 P54136 RARS Arginine--tRNA ligase, cytoplasmic yes yes 0 2 0 By MS/MS By matching By MS/MS By matching By matching 10 0 5 1 1 1 1 1 60.926 61.107 2 3.1698E-10 69652 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 87.001 83.679 20718000 0 0 0 0 1723400 0 0 0 0 2995900 0 7527800 0 3602900 4867600 16107 1733 14672 134620;134621;134622;134623;134624 107145 107145 2810;2811 1 FGEAIGMGFPVK Oxidation (M) 1267.6271 0.62709457 1977 P78347 GTF2I General transcription factor II-I yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 74.531 73.455 2 1.4647E-06 84946 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 113.62 101.03 2068300000 98871000 255050000 97216000 111610000 114060000 153170000 119330000 83924000 104600000 157820000 150330000 173050000 169660000 115090000 164550000 16108 1977 14673 134625;134626;134627;134628;134629;134630;134631;134632;134633;134634;134635;134636;134637;134638;134639;134640;134641 107146;107147;107148;107149;107150;107151;107152;107153;107154;107155;107156;107157;107158;107159;107160;107161;107162;107163;107164;107165 107165 3181 20 FGEAIGMGFPVK Unmodified 1251.6322 0.63217995 1977 P78347 GTF2I General transcription factor II-I yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 82.45 81.332 2 3.3099E-07 102744 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 118.18 100.27 1250700000 188360000 238180000 37265000 23701000 32684000 66993000 24701000 48836000 32853000 107490000 71098000 80664000 49060000 62425000 186340000 16109 1977 14673 134642;134643;134644;134645;134646;134647;134648;134649;134650;134651;134652;134653;134654;134655;134656;134657 107166;107167;107168;107169;107170;107171;107172;107173;107174;107175;107176;107177;107178;107179;107180;107181;107182;107183 107175 18 FGEDVVEVIK Unmodified 1133.5968 0.5968403 3933 Q96N67 DOCK7 Dedicator of cytokinesis protein 7 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 74.02 74.063 2 0.0025237 84714 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.749 50.815 132740000 0 0 0 10834000 10747000 12861000 8422100 11758000 8964400 15111000 11401000 0 13025000 11193000 18421000 16110 3933 14674 134658;134659;134660;134661;134662;134663;134664;134665;134666;134667;134668 107184;107185;107186;107187;107188;107189;107190 107185 2 FGEEIAR Unmodified 820.40792 0.40791731 3549 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 31.558 31.808 2 0.017119 34781 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 114.59 65.825 147590000 0 0 0 10965000 0 25871000 9789000 0 10173000 18494000 12375000 14829000 9459000 12169000 23466000 16111 3549 14675 134669;134670;134671;134672;134673;134674;134675;134676;134677;134678 107191;107192;107193;107194;107195;107196 107192 6 FGELGGFAAIQAK Unmodified 1307.6874 0.68738664 5061 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching 6.9 3.81 3 1 6 1 2 1 1 1 1 1 1 1 80.747 78.958 2 0.00069734 91567 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 72.643 56.17 121500000 43587000 36795000 15440000 0 0 4081000 0 0 0 5489000 0 4572600 3391200 2840900 5305000 16112 5061 14676 134679;134680;134681;134682;134683;134684;134685;134686;134687;134688 107197;107198;107199;107200 107197 3 FGEPVLAGFAR Unmodified 1162.6135 0.61349341 248 O15067 PFAS Phosphoribosylformylglycinamidine synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 80.073 79.477 2 0.0019798 92445 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 69.825 57.297 119240000 10230000 0 0 3088000 0 3979200 3356300 3931100 1726900 4086800 17734000 16299000 4517500 10239000 40052000 16113 248 14677 134689;134690;134691;134692;134693;134694;134695;134696;134697;134698;134699;134700 107201;107202;107203;107204;107205;107206;107207;107208;107209;107210 107209 10 FGEVLEISGK Unmodified 1077.5706 0.57062555 4368 Q9H2J4 PDCL3 Phosducin-like protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.57 3.85 3 1 3 1 2 1 1 1 1 68.869 65.841 2 0.0039682 80927 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 91.867 69.736 280850000 15298000 115480000 28384000 0 0 0 0 11441000 0 0 72664000 0 0 0 37589000 16114 4368 14678 134701;134702;134703;134704;134705;134706;134707 107211;107212;107213;107214;107215;107216;107217 107216 6 FGEVVDCTLK Unmodified 1166.5642 0.56415996 2365 Q14103 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.76 3 1 23 1 2 1 2 2 2 2 2 2 2 2 2 2 2 1 55.39 54.642 2 0.00076823 62483 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 120.12 0 2211600000 34132000 1349200000 21218000 39230000 25405000 40912000 41213000 27874000 51339000 52369000 123910000 186500000 60938000 88217000 69147000 16115 2365 14679 134708;134709;134710;134711;134712;134713;134714;134715;134716;134717;134718;134719;134720;134721;134722;134723;134724;134725;134726;134727;134728;134729;134730;134731;134732;134733;134734 107218;107219;107220;107221;107222;107223;107224;107225;107226;107227;107228;107229;107230;107231;107232;107233;107234;107235;107236;107237;107238;107239;107240;107241;107242;107243;107244;107245;107246;107247;107248;107249 107240 32 FGFAESIANQR Unmodified 1238.6044 0.60438529 2126 Q06265 EXOSC9 Exosome complex component RRP45 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 64.799 64.873 2 0.0026818 73439 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.568 48.128 59790000 0 0 0 2903300 3190400 4994300 0 0 3459200 6375200 6415200 8071800 4982000 5607500 13791000 16116 2126 14680 134735;134736;134737;134738;134739;134740;134741;134742;134743;134744;134745 107250;107251;107252;107253;107254;107255;107256;107257;107258;107259;107260;107261 107254 12 FGFAIGSQTTK Unmodified 1155.5924 0.59242362 3570 Q8WW12 PCNP PEST proteolytic signal-containing nuclear protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 66.663 65.343 2 3.3894E-07 87167 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 160.59 145.8 1010800000 396740000 151060000 25990000 18095000 19103000 20830000 28444000 20554000 17720000 27311000 48251000 67514000 25014000 46455000 97685000 16117 3570 14681 134746;134747;134748;134749;134750;134751;134752;134753;134754;134755;134756;134757;134758;134759;134760;134761 107262;107263;107264;107265;107266;107267;107268;107269;107270;107271;107272;107273;107274;107275 107269 11 FGFEIIETK Unmodified 1082.5648 0.56481189 4310 Q9GZZ1 NAA50 N-alpha-acetyltransferase 50 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.05 6 1 31 2 3 2 2 3 3 3 3 3 3 4 3 1 2 1 81.599 81.169 1;2 5.7067E-20 93959 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 171.73 152.95 7528600000 71297000 43220000 47494000 134510000 547250000 927910000 430750000 622310000 806820000 1244400000 1135000000 1478900000 8694800 11098000 19028000 16118 4310 14682 134762;134763;134764;134765;134766;134767;134768;134769;134770;134771;134772;134773;134774;134775;134776;134777;134778;134779;134780;134781;134782;134783;134784;134785;134786;134787;134788;134789;134790;134791;134792;134793;134794;134795;134796;134797;134798;134799 107276;107277;107278;107279;107280;107281;107282;107283;107284;107285;107286;107287;107288;107289;107290;107291;107292;107293;107294;107295;107296;107297;107298;107299;107300;107301;107302;107303;107304;107305;107306;107307;107308;107309;107310;107311;107312;107313;107314;107315;107316;107317;107318;107319;107320;107321;107322;107323;107324;107325;107326;107327;107328;107329 107278 47 FGFEIIETKK Unmodified 1210.6598 0.6597749 4310 Q9GZZ1 NAA50 N-alpha-acetyltransferase 50 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 22 2 2 2 2 2 2 2 2 2 2 1 1 72.1 72.151 2;3 0.00031533 83084 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 131.06 77.094 1332100000 0 0 0 59329000 97067000 79862000 121260000 175070000 87859000 138880000 185950000 379720000 2949300 1726600 2477000 16119 4310 14683 134800;134801;134802;134803;134804;134805;134806;134807;134808;134809;134810;134811;134812;134813;134814;134815;134816;134817;134818;134819;134820;134821 107330;107331;107332;107333;107334;107335;107336;107337;107338;107339;107340;107341;107342;107343;107344;107345;107346;107347;107348;107349;107350;107351;107352;107353 107343 21 FGFGFGGTGK Unmodified 973.46577 0.46576654 3608 Q92499 DDX1 ATP-dependent RNA helicase DDX1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 69.652 69.428 2 0.0018416 78705 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.98 42.268 327720000 0 0 10596000 20202000 15067000 37270000 0 18907000 23874000 33027000 32381000 40451000 26566000 0 69378000 16120 3608 14684 134822;134823;134824;134825;134826;134827;134828;134829;134830;134831;134832 107354;107355;107356;107357;107358;107359;107360;107361;107362;107363;107364;107365 107357 11 FGFGFGNGMK Oxidation (M) 1076.475 0.47495102 5011 Q9ULX6 AKAP8L A-kinase anchor protein 8-like yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 66.592 66.647 2 0.0069992 77427 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 55.676 49.226 44731000 0 0 0 3189700 3330200 5094100 4472600 0 3899100 4691700 5482900 8129000 0 0 6441600 16121 5011 14685 134833;134834;134835;134836;134837;134838;134839;134840;134841 107366;107367;107368;107369;107370;107371 107371 6353 6 FGFSTLALVEK Unmodified 1210.6598 0.6597749 4083 Q9BPZ7 MAPKAP1 Target of rapamycin complex 2 subunit MAPKAP1 yes yes 0 0 0 By MS/MS 2 0 1 1 92.24 84.109 2 0.007082 109080 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.108 48.679 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16122 4083 14686 134842 107372 107372 1 FGFVDAQK Unmodified 910.45487 0.45486751 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.18 3.29 3 1 13 1 2 1 1 2 1 1 1 1 1 1 1 1 1 1 50.67 49.409 2 0.0044886 55703 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 132.09 97.201 1184500000 111360000 315300000 93598000 48661000 36222000 60488000 37635000 39535000 34010000 51532000 57255000 91070000 59769000 62666000 85365000 16123 2930 14687 134843;134844;134845;134846;134847;134848;134849;134850;134851;134852;134853;134854;134855;134856;134857;134858;134859 107373;107374;107375;107376;107377;107378;107379;107380;107381;107382;107383;107384;107385;107386;107387;107388;107389;107390;107391;107392 107380 19 FGGAAVFPNQEQAR Unmodified 1490.7266 0.72662569 1097 P19971 TYMP Thymidine phosphorylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 57.098 57.22 2 2.8779E-05 65916 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 103.22 77.282 62535000 0 0 0 25440000 0 4587000 0 0 0 6767000 7428200 0 0 7571700 10741000 16124 1097 14688 134860;134861;134862;134863;134864;134865;134866;134867 107393;107394;107395;107396;107397;107398;107399;107400;107401 107401 9 FGGAAVFPNQEQARELAK Unmodified 1931.9854 0.98535957 1097 P19971 TYMP Thymidine phosphorylase yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 72.883 67.031 3 1.7369E-05 88123 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.953 63.338 274880000 269130000 0 5745600 0 0 0 0 0 0 0 0 0 0 0 0 16125 1097 14689 134868;134869 107402;107403 107402 2 FGGALDAAAK Unmodified 919.47633 0.47633123 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.514 36.696 2 0.0025236 40663 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 82.75 60.226 5512800000 0 0 0 158130000 329020000 364570000 1242600000 1437500000 856300000 235930000 271290000 496450000 18187000 30193000 72712000 16126 1714 14690 134870;134871;134872;134873;134874;134875;134876;134877;134878;134879;134880;134881 107404;107405;107406;107407;107408;107409;107410;107411;107412;107413;107414;107415;107416;107417;107418;107419;107420 107404 17 FGGDFLVYPGDPLR Unmodified 1551.7722 0.7721789 4133 Q9BSV6 TSEN34 tRNA-splicing endonuclease subunit Sen34 yes yes 0 0 0 By matching By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 89.268 89.41 2 0.0012965 103534 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.542 40.797 10746000 0 0 0 0 0 1163700 0 1091900 0 2578500 1317200 0 0 0 4594300 16127 4133 14691 134882;134883;134884;134885;134886 107421 107421 1 FGGEHVPNSPFQVTALAGDQPSVQPPLR Unmodified 2944.4832 0.48315453 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 2 85.403 85.559 3;4 3.5144E-11 99066 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 49.094 46.414 86628000 0 0 0 0 0 0 0 0 0 12249000 7972700 5787600 0 0 60619000 16128 1124 14692 134887;134888;134889;134890;134891 107422;107423;107424;107425;107426;107427 107422 6 FGGGNPELLTQMVSK Unmodified 1576.7919 0.79192806 1426 P40939 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 0 0 0 By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 80.478 80.516 2 0.00066274 92811 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.694 37.841 28412000 0 0 0 1376200 1563400 0 1479800 2788900 0 4087700 0 4840700 2512800 2737700 7024800 16129 1426 14693 134892;134893;134894;134895;134896;134897;134898;134899;134900 107428;107429;107430 107428 3 FGGLQNK Unmodified 762.40244 0.40243801 28 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20.314 19.688 2 0.024284 20536 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 96.119 55.433 507880000 285210000 98383000 48911000 4154000 3634400 5813900 4716600 3713000 4791000 6853100 9203300 8123200 6875800 5964800 11530000 16130 28 14694 134901;134902;134903;134904;134905;134906;134907;134908;134909;134910;134911;134912;134913;134914;134915 107431;107432;107433 107433 3 FGGLVLSPVGK Unmodified 1072.6281 0.62808085 4939 Q9UJK0 TSR3 Ribosome biogenesis protein TSR3 homolog yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.321 76.379 2 0.00028424 87568 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.178 57.822 159930000 0 0 0 7687400 10174000 11786000 11553000 11406000 9085600 16596000 14811000 17792000 13516000 14347000 21171000 16131 4939 14695 134916;134917;134918;134919;134920;134921;134922;134923;134924;134925;134926;134927 107434;107435;107436;107437;107438;107439;107440;107441;107442;107443;107444 107437 11 FGGNPGGFGNQGGFGNSR Unmodified 1725.7608 0.76077937 2242 Q13148 TARDBP TAR DNA-binding protein 43 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 56.538 56.662 2;3 0 64085 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 265.53 241.68 2454600000 0 0 0 129720000 122990000 167930000 213260000 143850000 158400000 193130000 223300000 211300000 293980000 233780000 362950000 16132 2242 14696 134928;134929;134930;134931;134932;134933;134934;134935;134936;134937;134938;134939;134940;134941;134942;134943;134944;134945;134946;134947;134948;134949;134950;134951 107445;107446;107447;107448;107449;107450;107451;107452;107453;107454;107455;107456;107457;107458;107459;107460;107461;107462;107463;107464;107465;107466 107447 19 FGGPVHHQAQR Unmodified 1232.6163 0.61628738 2566 Q15717 ELAVL1 ELAV-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 8.1646 8.3422 3 0.007113 5717 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 39.266 26.65 95837000 0 0 0 0 0 4065400 4798700 3660800 2817200 8201700 29903000 15444000 8479300 6835000 11632000 16133 2566 14697 134952;134953;134954;134955;134956;134957;134958;134959;134960;134961 107467;107468;107469;107470;107471 107468 3 FGGQGNQFSYIQSGCQSGIK Unmodified 2161.9851 0.98510158 95 CON__Q5D862;Q5D862 FLG2 Filaggrin-2 yes no 0 0 0 By MS/MS 10 0 1 1 69.098 68.446 3 1.3522E-07 79180 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 69.747 62.301 + 27349000 0 0 0 27349000 0 0 0 0 0 0 0 0 0 0 0 16134 95 14698 134962 107472 107472 1 FGGSGSQVDSAR Unmodified 1166.5316 0.53161428 2252 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.001 18.189 2 1.79E-34 16937 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 211.27 204.37 598380000 0 0 0 40587000 43620000 59115000 22907000 16891000 12304000 76273000 82922000 129270000 22658000 28061000 63766000 16135 2252 14699 134963;134964;134965;134966;134967;134968;134969;134970;134971;134972;134973;134974 107473;107474;107475;107476;107477;107478;107479;107480;107481;107482;107483;107484;107485;107486 107481 14 FGGTVTEVLLK Unmodified 1162.6598 0.6597749 4753 Q9NYV6 RRN3 RNA polymerase I-specific transcription initiation factor RRN3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.72 77.777 2 0.00029633 89878 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 90.15 62.896 97547000 0 0 0 3097400 6045100 7863200 6080900 12185000 6315500 12738000 7940300 10645000 5824800 7903200 10909000 16136 4753 14700 134975;134976;134977;134978;134979;134980;134981;134982;134983;134984;134985;134986 107487;107488;107489;107490;107491;107492;107493;107494;107495;107496;107497;107498 107487 12 FGGVQELLNQQK Unmodified 1359.7147 0.71466402 5217 Q9Y530 OARD1 O-acetyl-ADP-ribose deacetylase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.18 3.74 3 1 7 1 2 1 1 1 1 1 1 1 1 74.235 72.332 2 3.1148E-14 91243 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 170.5 146.65 167810000 83768000 51790000 0 0 0 0 2947800 5426600 0 8208400 0 6889500 0 0 8779100 16137 5217 14701 134987;134988;134989;134990;134991;134992;134993;134994;134995;134996;134997 107499;107500;107501;107502;107503;107504;107505;107506;107507 107501 9 FGHEFLEFEFRPDGK Unmodified 1853.8737 0.87368386 3734;1846 Q96A72;P61326 MAGOHB;MAGOH Protein mago nashi homolog 2;Protein mago nashi homolog no no 0 0 1 By MS/MS 2 0 1 1 88.569 80.438 4 0.0066495 104566 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.69 40.977 15057000 15057000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16138 3734;1846 14702 134998 107508 107508 1 FGIEPNAELIYEVTLK Unmodified 1834.9717 0.97166657 2294 Q13451 FKBP5 Peptidyl-prolyl cis-trans isomerase FKBP5;Peptidyl-prolyl cis-trans isomerase FKBP5, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 98.103 92.644 2 0.000845 116294 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 100.22 89.613 40778000 32020000 8758900 0 0 0 0 0 0 0 0 0 0 0 0 0 16139 2294 14703 134999;135000;135001 107509;107510;107511 107511 3 FGIIMRDPQTEEFK Oxidation (M) 1725.8396 0.83960654 360 O43719 HTATSF1 HIV Tat-specific factor 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.47 2 1 14 1 1 1 1 1 1 1 1 1 1 1 2 2 63.68 63.261 2;3 3.1888E-14 71355 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 113.76 107.84 774980000 181600000 0 0 31828000 30971000 56847000 42472000 2477400 42807000 50258000 6715600 111530000 7844300 90046000 119580000 16140 360 14704 135002;135003;135004;135005;135006;135007;135008;135009;135010;135011;135012;135013;135014;135015;135016 107512;107513;107514;107515;107516;107517;107518;107519;107520;107521;107522;107523;107524;107525 107517 458 13 FGIIMRDPQTEEFK Unmodified 1709.8447 0.84469192 360 O43719 HTATSF1 HIV Tat-specific factor 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 73.423 73.527 3 2.012E-16 84018 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 119.32 100.58 284640000 0 0 0 7487800 0 15444000 0 18283000 20622000 0 28022000 44546000 19875000 25548000 104810000 16141 360 14704 135017;135018;135019;135020;135021;135022;135023;135024;135025;135026 107526;107527;107528;107529;107530;107531;107532;107533;107534;107535;107536;107537 107528 12 FGILIGR Unmodified 774.47521 0.47520902 3296 Q8IZL8 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 71.93 72.044 2 0.042017 81915 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.889 40.722 39799000 0 0 0 2488700 0 3338700 1724900 2604400 2533500 3504400 3439300 5053300 5565800 4592000 4953900 16142 3296 14705 135027;135028;135029;135030;135031;135032;135033;135034;135035;135036;135037 107538;107539 107539 2 FGIQAQMVTTDFQK Oxidation (M) 1628.7868 0.78684269 1588 P49720 PSMB3 Proteasome subunit beta type-3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 71.564 71.629 2 7.6485E-13 82397 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 107.06 88.098 64074000 0 0 0 4915400 1774000 0 2269900 2581500 0 2783800 11336000 10543000 0 6659400 21211000 16143 1588 14706 135038;135039;135040;135041;135042;135043;135044;135045;135046 107540;107541;107542;107543;107544 107541 2552 5 FGIQAQMVTTDFQK Unmodified 1612.7919 0.79192806 1588 P49720 PSMB3 Proteasome subunit beta type-3 yes yes 0 0 0 By MS/MS 10 0 1 1 78.624 78.87 2 5.1328E-12 90740 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 103.34 97.37 17023000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17023000 16144 1588 14706 135047 107545 107545 1 FGIQEEK Unmodified 849.42323 0.42323303 2652 Q2M389 KIAA1033 WASH complex subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 30.145 29.445 2 0.023929 32282 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 94.407 60.669 211310000 0 171710000 2460200 0 3383800 4221800 4833900 3838500 2589200 6266200 5674900 0 0 6337800 0 16145 2652 14707 135048;135049;135050;135051;135052;135053;135054;135055;135056;135057 107546;107547;107548;107549;107550 107546 5 FGISANDTSILIVYIEEGEK Unmodified 2197.1154 0.11543027 5156 Q9Y3C4 TPRKB EKC/KEOPS complex subunit TPRKB yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.57 0.495 3 4 4 2 1 99.086 94.451 2;3 4.1522E-09 99013 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 63.578 58.578 29296000 22291000 4819600 2186100 0 0 0 0 0 0 0 0 0 0 0 0 16146 5156 14708 135058;135059;135060;135061;135062;135063;135064 107551;107552;107553;107554;107555;107556;107557 107551 7 FGISEPGNQEK Unmodified 1204.5724 0.57241646 1601;32 P49792;P0DJD0;P0DJD1;A6NKT7;Q7Z3J3 RANBP2;RGPD1;RGPD2;RGPD3;RGPD4 E3 SUMO-protein ligase RanBP2;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RanBP2-like and GRIP domain-containing protein 3;RanBP2-like and GRIP domain-containing protein 4 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 39.794 39.24 2 9.2818E-05 49269 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.8 91.295 380730000 0 176700000 0 11520000 10264000 14415000 13225000 16097000 11891000 18886000 20300000 24089000 22087000 17030000 24230000 16147 1601;32 14709 135065;135066;135067;135068;135069;135070;135071;135072;135073;135074;135075;135076;135077;135078 107558;107559;107560;107561;107562;107563;107564;107565;107566;107567;107568;107569 107561 12 FGISSVPTK Unmodified 934.51238 0.51238239 2004 P82979 SARNP SAP domain-containing ribonucleoprotein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 50.871 51.022 2 0.003237 57700 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 90.709 46.901 1105700000 0 0 0 62653000 79767000 64219000 70967000 62244000 62006000 78015000 117440000 160790000 83652000 92943000 171030000 16148 2004 14710 135079;135080;135081;135082;135083;135084;135085;135086;135087;135088;135089;135090 107570;107571;107572;107573;107574;107575;107576;107577;107578;107579;107580;107581;107582;107583;107584;107585;107586;107587;107588;107589;107590 107573 21 FGIVTSSAGTGTTEDTEAK Unmodified 1870.8796 0.87961668 2004 P82979 SARNP SAP domain-containing ribonucleoprotein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.4 52.543 2 7.1424E-59 59111 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 157.52 143.1 273610000 0 0 0 11580000 11056000 17194000 10894000 12356000 10921000 22915000 32988000 49831000 18209000 20927000 54741000 16149 2004 14711 135091;135092;135093;135094;135095;135096;135097;135098;135099;135100;135101;135102 107591;107592;107593;107594;107595;107596;107597;107598;107599;107600;107601 107595 11 FGIYDIDNK Unmodified 1083.5237 0.52367535 4064 Q99829 CPNE1 Copine-1 yes yes 0 0 0 By MS/MS 10 0 1 1 66.817 67.335 2 0.030157 76323 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.283 27.724 10578000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10578000 16150 4064 14712 135103 107602 107602 1 FGKPELPRQPGSTAQYDAGAGSPEAEPTDSDSPPSSSADASR Unmodified 4216.9057 0.90573145 234 O14976 GAK Cyclin-G-associated kinase yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 59.121 59.162 4 4.9301E-11 67407 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 33.4 32.029 70516000 0 0 0 3478700 5247600 7768500 4521400 6529300 8838000 0 8474800 18176000 0 7481200 0 16151 234 14713 135104;135105;135106;135107;135108;135109;135110;135111;135112 107603;107604;107605;107606;107607;107608;107609;107610 107608 8 FGLFSAEIK Unmodified 1010.5437 0.54368251 1455 P42356;Q8N8J0;A4QPH2 PI4KA;PI4KAP1;PI4KAP2 Phosphatidylinositol 4-kinase alpha;Putative inactive phosphatidylinositol 4-kinase alpha-like protein P1;Putative phosphatidylinositol 4-kinase alpha-like protein P2 yes no 0 0 0 By MS/MS 2 0 1 1 87.442 79.312 2 0.0074102 103290 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.741 64.512 20125000 20125000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16152 1455 14714 135113 107611 107611 1 FGLGTPEK Unmodified 847.44397 0.44396847 2833 Q5VZK9 LRRC16A Leucine-rich repeat-containing protein 16A yes yes 0 0 0 By MS/MS 10 0 1 1 40.516 40.011 2 0.032024 45175 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 100.39 61.554 11729000 0 0 0 11729000 0 0 0 0 0 0 0 0 0 0 0 16153 2833 14715 135114 107612 107612 0 FGLIQSMK Unmodified 922.49462 0.49462383 1728 P53990 IST1 IST1 homolog yes yes 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 63.622 63.915 2 0.029639 73457 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 56.014 43.821 10810000 0 0 0 0 0 2400500 0 0 0 0 2667600 0 0 0 5741500 16154 1728 14716 135115;135116;135117 107613 107613 1 FGLLDQDLSNIGPAYDNQK Unmodified 2107.0222 0.02219859 4846 Q9UBL3 ASH2L Set1/Ash2 histone methyltransferase complex subunit ASH2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.24 2.35 2 19 1 1 2 2 2 2 2 2 2 1 2 2 86.754 86.496 2;3 1.0774E-11 100339 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 109.22 101.5 179270000 0 69289000 2458200 0 4392800 5387500 0 7789000 8847300 13174000 10667000 13116000 2149900 8734500 33269000 16155 4846 14717 135118;135119;135120;135121;135122;135123;135124;135125;135126;135127;135128;135129;135130;135131;135132;135133;135134;135135;135136;135137;135138 107614;107615;107616;107617;107618;107619;107620;107621;107622;107623 107614 10 FGLNVSSISR Unmodified 1078.5771 0.57710791 2004 P82979 SARNP SAP domain-containing ribonucleoprotein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.611 68.69 2 0.00093683 78699 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 111.82 98.149 325980000 0 0 0 16640000 18852000 18803000 29974000 13991000 13631000 29767000 31249000 51170000 17952000 28134000 55823000 16156 2004 14718 135139;135140;135141;135142;135143;135144;135145;135146;135147;135148;135149;135150 107624;107625;107626;107627;107628;107629;107630;107631;107632;107633;107634 107625 9 FGLNVSSISRK Unmodified 1206.6721 0.67207093 2004 P82979 SARNP SAP domain-containing ribonucleoprotein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 57.022 57.142 3 0.00085656 65093 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.663 44.67 378510000 0 0 0 18162000 17727000 26157000 22433000 25826000 22513000 29618000 36459000 55218000 26601000 29363000 68433000 16157 2004 14719 135151;135152;135153;135154;135155;135156;135157;135158;135159;135160;135161;135162 107635;107636;107637;107638;107639;107640;107641;107642 107635 6 FGLQGSAVASSFGNMMSK 2 Oxidation (M) 1849.8339 0.83386923 3511 Q8TE04 PANK1 Pantothenate kinase 1 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 70.955 71.13 2 0.00013744 81793 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 55.314 49.342 22252000 0 0 0 0 0 6867600 0 0 0 3430300 3670800 8283500 0 0 0 16158 3511 14720 135163;135164;135165;135166 107643;107644 107643 5017;5018 2 FGLSVGHHLGK Unmodified 1150.6247 0.6247268 1023 P15559 NQO1 NAD(P)H dehydrogenase [quinone] 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 2 43.314 43.536 2;3 0.0043988 49189 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 55.353 41.234 170420000 0 0 0 8899800 4925200 10595000 0 6675100 10748000 5388300 7960400 28308000 0 1189300 85731000 16159 1023 14721 135167;135168;135169;135170;135171;135172;135173;135174;135175;135176;135177 107645;107646;107647;107648 107645 3 FGLTPEQFGENLR Unmodified 1506.7467 0.74669243 3038 Q7KZ85 SUPT6H Transcription elongation factor SPT6 yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS 10 0 5 1 1 1 1 1 81.514 81.631 2 0.022264 94054 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.334 36.115 24581000 0 0 0 0 0 4449200 0 0 2505800 4221900 0 0 2624600 0 10780000 16160 3038 14722 135178;135179;135180;135181;135182 107649 107649 1 FGLTTSR Unmodified 780.413 0.41300269 1333 P33992 MCM5 DNA replication licensing factor MCM5 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 34.252 34.509 2 0.041071 36720 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.312 44.109 96522000 0 0 0 0 3993600 12013000 5123200 0 4438200 0 14215000 12945000 6037900 10898000 26858000 16161 1333 14723 135183;135184;135185;135186;135187;135188;135189;135190;135191 107650 107650 1 FGMSEEISCNIK Oxidation (M) 1429.6218 0.62175119 5368 yes yes 0 1 0 By MS/MS 2.33 0.471 2 1 3 38.67 33.815 2 0.0032217 43989 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.906 39.555 + 79173000 0 79173000 0 0 0 0 0 0 0 0 0 0 0 0 0 16162 5368 14724 135192;135193;135194 107651 107651 6750 1 FGMTPSK Oxidation (M) 782.36328 0.36327531 1755 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 2 3 2 13.134 9.8998 1;2 0.013818 12855 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 118.69 77.478 2984900000 1134200000 1668100000 182550000 0 0 0 0 0 0 0 0 0 0 0 0 16163 1755 14725 135195;135196;135197;135198;135199;135200;135201 107652;107653;107654;107655;107656;107657 107657 2869 5 FGMTPSK Unmodified 766.36836 0.36836069 1755 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 26.685 25.606 2 0.022033 34771 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 108.24 81.071 4552400000 2099300000 2106400000 167620000 15877000 12733000 17227000 12956000 12713000 0 0 0 2912900 0 662470 104010000 16164 1755 14725 135202;135203;135204;135205;135206;135207;135208;135209;135210;135211;135212 107658;107659;107660;107661;107662;107663 107662 6 FGNDGLHEPLDWAQEEGK Unmodified 2040.9177 0.91773352 5258 Q9Y606 PUS1 tRNA pseudouridine synthase A, mitochondrial yes yes 0 0 0 By MS/MS 10 0 1 1 74.556 74.895 3 0.048156 85861 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.925 31.509 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16165 5258 14726 135213 107664 107664 1 FGNDVQHFK Unmodified 1090.5196 0.51959303 1934 P62993 GRB2 Growth factor receptor-bound protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 35.27 30.409 2 4.13E-23 42245 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 202.45 187.68 171850000 101620000 23634000 46589000 0 0 0 0 0 0 0 0 0 0 0 0 16166 1934 14727 135214;135215;135216 107665;107666;107667 107666 3 FGNEVIPVTVTVK Unmodified 1401.7868 0.78676633 1177 P24752 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 4 3.46 3 1 1 1 1 1 81.799 78.016 2 2.9859E-08 97709 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 141.44 121.68 627130000 11146000 587500000 11374000 0 0 0 0 0 0 0 0 0 0 0 17110000 16167 1177 14728 135217;135218;135219;135220 107668;107669;107670;107671;107672 107668 4 FGNICVVR Unmodified 963.49602 0.49602082 2528 Q15393 SF3B3 Splicing factor 3B subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.965 53.108 2 0.0001079 59950 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 155.73 134.58 2478400000 0 0 0 94424000 118720000 115360000 140540000 108300000 105530000 195000000 222020000 307590000 264260000 301250000 505390000 16168 2528 14729 135221;135222;135223;135224;135225;135226;135227;135228;135229;135230;135231;135232 107673;107674;107675;107676;107677;107678;107679;107680;107681;107682;107683;107684;107685;107686;107687 107683 15 FGNICVVRLPPNTNDEVDEDPTGNK Unmodified 2799.3134 0.31337159 2528 Q15393 SF3B3 Splicing factor 3B subunit 3 yes yes 0 0 1 By MS/MS 2 0 1 1 82.198 74.068 3 6.4615E-12 96399 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.981 67.028 13244000 13244000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16169 2528 14730 135233 107688;107689 107688 2 FGNSEFDPPGPNVATTTVSDDVSMTFITSK Oxidation (M) 3176.4496 0.4495903 546 O75821 EIF3G Eukaryotic translation initiation factor 3 subunit G yes yes 0 1 0 By MS/MS By MS/MS 2.8 0.4 1 4 3 2 91.004 86.677 3 3.9507E-35 104830 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 91.599 89.435 42670000 17572000 25098000 0 0 0 0 0 0 0 0 0 0 0 0 0 16170 546 14731 135234;135235;135236;135237;135238 107690;107691;107692 107691 706 3 FGNSEFDPPGPNVATTTVSDDVSMTFITSK Unmodified 3160.4547 0.45467568 546 O75821 EIF3G Eukaryotic translation initiation factor 3 subunit G yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 94.592 89.28 3 3.9883E-190 113139 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 180.35 177.62 59886000 53600000 0 6286000 0 0 0 0 0 0 0 0 0 0 0 0 16171 546 14731 135239;135240 107693;107694 107693 2 FGNTEQGFK Unmodified 1026.4771 0.47705951 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29.112 28.296 2 0.0017213 36602 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 133.6 93.937 206800000 3705100 56472000 2510600 11513000 7754900 0 7616700 11243000 10286000 15131000 17500000 17611000 16171000 12772000 16518000 16172 1601 14732 135241;135242;135243;135244;135245;135246;135247;135248;135249;135250;135251;135252;135253;135254 107695;107696;107697;107698;107699;107700;107701;107702;107703;107704;107705 107697 9 FGNTPLHVAAR Unmodified 1181.6305 0.63054046 3386 Q8NB46 ANKRD52 Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 40.818 41.097 3 0.003895 44539 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.348 35.498 48356000 0 0 0 0 3949100 0 0 8114800 0 8564400 0 6901900 4133600 5668500 11024000 16173 3386 14733 135255;135256;135257;135258;135259;135260;135261 107706;107707 107706 2 FGNVYLAR Unmodified 938.4974 0.49740102 231;3853 O14965;Q96GD4 AURKA;AURKB Aurora kinase A;Aurora kinase B no no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 51.501 51.974 2 0.0092148 58789 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 83.614 63.332 26942000 0 0 0 0 0 5769100 0 0 0 0 6753700 6074000 0 0 8345100 16174 231;3853 14734 135262;135263;135264;135265;135266 107708;107709;107710;107711 107710 4 FGPALSVK Unmodified 817.46979 0.46978929 958 P11940;Q9H361 PABPC1;PABPC3 Polyadenylate-binding protein 1;Polyadenylate-binding protein 3 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 4 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 53.293 52.525 2 0.029412 68045 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.774 5.4784 5620500000 1880900000 1815900000 0 118370000 114870000 145540000 145620000 124010000 110110000 180270000 179080000 203820000 184090000 184720000 233200000 16175 958 14735 135267;135268;135269;135270;135271;135272;135273;135274;135275;135276;135277;135278;135279;135280;135281;135282 107712;107713;107714;107715 107712 4 FGPARTDSVIIADQTPTPTR Unmodified 2142.1069 0.10693127 1055 P17544 ATF7 Cyclic AMP-dependent transcription factor ATF-7 yes yes 0 0 1 By MS/MS By matching 10 0 2 1 1 65.333 65.479 3 0.00022 74800 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 41.257 36.989 5526200 0 0 0 0 0 0 3223700 0 0 0 0 0 2302500 0 0 16176 1055 14736 135283;135284 107716 107716 1 FGPEAAAGLVPLVVR Unmodified 1494.8558 0.85584895 3934 Q96NA2 RILP Rab-interacting lysosomal protein yes yes 0 0 0 By MS/MS 10 0 1 1 91.054 91.192 2 0.020862 105622 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.606 28.684 1031000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1031000 16177 3934 14737 135285 107717 107717 1 FGPGGQLIK Unmodified 915.5178 0.51780212 242 O15027 SEC16A Protein transport protein Sec16A yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.532 52.675 2 0.019171 60827 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 54.205 30.681 212850000 0 0 0 11669000 9847800 14661000 13344000 16181000 12182000 22003000 20466000 25244000 20477000 19570000 27203000 16178 242 14738 135286;135287;135288;135289;135290;135291;135292;135293;135294;135295;135296;135297 107718;107719 107719 2 FGPLTPELMVPR Oxidation (M) 1371.7221 0.72205759 1424 P40937 RFC5 Replication factor C subunit 5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 82.431 82.468 2 5.4332E-06 95463 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 109.44 104.5 665350000 0 0 0 25979000 40779000 73200000 0 52729000 50052000 87849000 0 91904000 73638000 66877000 102340000 16179 1424 14739 135298;135299;135300;135301;135302;135303;135304;135305;135306;135307 107720;107721;107722;107723;107724;107725;107726;107727 107727 2242 8 FGPLTPELMVPR Unmodified 1355.7271 0.72714296 1424 P40937 RFC5 Replication factor C subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 87.008 87.077 2 0.00010711 100833 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 87.895 76.047 95046000 0 0 0 1544100 3464000 6452300 2558800 8762300 4679100 8218100 7899600 9250100 6862000 7791100 27564000 16180 1424 14739 135308;135309;135310;135311;135312;135313;135314;135315;135316;135317;135318;135319 107728;107729;107730;107731;107732 107731 5 FGPPGPEAW Unmodified 956.43922 0.43921744 1234 P28340 POLD1 DNA polymerase delta catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.856 79.915 2 0.018489 91946 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.787 48.432 67489000 0 0 0 4099600 3693600 4109200 3999900 4558800 4159900 6409000 7724400 7920800 4783800 5892500 10137000 16181 1234 14740 135320;135321;135322;135323;135324;135325;135326;135327;135328;135329;135330;135331 107733 107733 1 FGPVVAPK Unmodified 813.47487 0.47487467 2595 Q15942 ZYX Zyxin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.973 44.147 2 0.022888 48993 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 60.788 42.227 662100000 0 0 0 19127000 24494000 33492000 31741000 24146000 35669000 51991000 58023000 85937000 54341000 81424000 161710000 16182 2595 14741 135332;135333;135334;135335;135336;135337;135338;135339;135340;135341;135342;135343 107734;107735;107736;107737;107738;107739;107740;107741;107742;107743;107744 107739 11 FGPYESYDSR Unmodified 1219.5146 0.51456723 2721 Q5BKZ1 ZNF326 DBIRD complex subunit ZNF326 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 44.817 45.182 2 0.011537 50230 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 54.066 47.963 84325000 0 0 0 0 0 8213100 0 6690700 0 7027000 11253000 12951000 9967800 12653000 15570000 16183 2721 14742 135344;135345;135346;135347;135348;135349;135350;135351 107745;107746;107747;107748;107749;107750;107751;107752 107752 8 FGPYYTEPVIAGLDPK Unmodified 1765.8927 0.89268797 1588 P49720 PSMB3 Proteasome subunit beta type-3 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 85.93 86.098 2 0.00030456 99926 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 65.395 49.506 4113800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4113800 16184 1588 14743 135352;135353 107753;107754 107754 2 FGQAATMEGIGAIGGTPPAFNR Oxidation (M) 2178.0528 0.052787212 2508 Q15233 NONO Non-POU domain-containing octamer-binding protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 1 1 2 2 2 2 2 2 2 2 1 78.383 78.477 2;3 2.6855E-255 90641 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 226.65 198.78 883020000 0 0 0 6747500 11062000 20748000 75654000 80934000 59324000 142750000 109280000 168610000 65583000 86367000 55954000 16185 2508 14744 135354;135355;135356;135357;135358;135359;135360;135361;135362;135363;135364;135365;135366;135367;135368;135369;135370;135371;135372;135373 107755;107756;107757;107758;107759;107760;107761;107762;107763;107764;107765;107766;107767;107768;107769 107756 4115 13 FGQAATMEGIGAIGGTPPAFNR Unmodified 2162.0579 0.05787259 2508 Q15233 NONO Non-POU domain-containing octamer-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 83.389 83.493 3 1.7093E-43 96657 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 110.33 103.66 121180000 0 0 0 0 3045200 3882900 1540000 9798000 5589400 22065000 12744000 16330000 5618000 0 40568000 16186 2508 14744 135374;135375;135376;135377;135378;135379;135380;135381;135382;135383 107770;107771;107772;107773;107774;107775;107776;107777;107778;107779 107771 10 FGQGAHHAAGQAGNEAGR Unmodified 1734.7935 0.79347648 2981 Q6UWP8 SBSN Suprabasin yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 2 2 2 2 2 2 2 1 2 1 1 9.547 9.6318 3;4 2.8281E-48 8504 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 145.69 132.55 442510000 0 0 0 86962000 21106000 30273000 34654000 51910000 13251000 22840000 55052000 97529000 19627000 9307400 0 16187 2981 14745 135384;135385;135386;135387;135388;135389;135390;135391;135392;135393;135394;135395;135396;135397;135398;135399;135400;135401;135402 107780;107781;107782;107783;107784;107785;107786;107787;107788;107789;107790;107791;107792;107793;107794;107795;107796;107797 107795 11 FGQGDLPKPINSDFR Unmodified 1689.8475 0.84746911 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 69.467 69.606 3 0.008732 79240 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 37.77 26.724 83077000 0 0 0 0 3400500 4182100 3951100 6935300 4186800 7162200 11299000 10460000 9930700 5872600 15697000 16188 1601 14746 135403;135404;135405;135406;135407;135408;135409;135410;135411;135412;135413 107798;107799;107800;107801 107801 4 FGQGGAGPVGGQGPR Unmodified 1340.6585 0.65854613 1151 P23246 SFPQ Splicing factor, proline- and glutamine-rich yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.732 32.917 2 6.2155E-27 35820 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 144.77 114.08 1080700000 0 0 0 59473000 59597000 76584000 107810000 72391000 51320000 93408000 131710000 121740000 82365000 84346000 139980000 16189 1151 14747 135414;135415;135416;135417;135418;135419;135420;135421;135422;135423;135424;135425 107802;107803;107804;107805;107806;107807;107808;107809;107810;107811;107812;107813;107814 107805 13 FGQGIHHAAGQVGK Unmodified 1405.7215 0.72148073 2981 Q6UWP8 SBSN Suprabasin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 20.884 20.948 3 0.012667 21837 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 24.415 15.902 68945000 0 0 0 22075000 2686200 15690000 13686000 0 0 0 7169600 0 0 7638700 0 16190 2981 14748 135426;135427;135428;135429;135430;135431 107815;107816;107817;107818 107818 4 FGQGSGPIVLDDVR Unmodified 1458.7467 0.74669243 4883 Q9UGM3 DMBT1 Deleted in malignant brain tumors 1 protein yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 74.621 74.612 2 0.00037061 85960 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 89.548 84.935 65126000 0 0 0 7661700 6220100 6097300 0 6825900 0 19410000 8569400 0 0 0 10341000 16191 4883 14749 135432;135433;135434;135435;135436;135437;135438;135439;135440 107819;107820;107821;107822;107823;107824;107825;107826;107827 107825 9 FGQGVDNAAGQAGNEAGR Unmodified 1717.7768 0.77682336 2981 Q6UWP8 SBSN Suprabasin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 2 2 2 1 1 1 1 2 1 1 1 1 33.59 33.705 2;3 2.392E-39 36487 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 185.57 162.22 203330000 0 0 0 37357000 16042000 15256000 13013000 17328000 6048300 12565000 23022000 28525000 14659000 7441700 12072000 16192 2981 14750 135441;135442;135443;135444;135445;135446;135447;135448;135449;135450;135451;135452;135453;135454;135455;135456 107828;107829;107830;107831;107832;107833;107834;107835;107836;107837;107838;107839;107840 107837 12 FGQGVHHAAGQAGNEAGR Unmodified 1762.8248 0.82477661 2981 Q6UWP8 SBSN Suprabasin yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 1 2 2 2 2 2 2 2 2 2 2 14.586 14.764 3;4 8.403E-33 13211 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 119.51 106.09 505250000 0 0 0 63505000 7315600 38811000 50194000 75812000 17402000 44966000 49865000 56225000 38973000 26827000 35359000 16193 2981 14751 135457;135458;135459;135460;135461;135462;135463;135464;135465;135466;135467;135468;135469;135470;135471;135472;135473;135474;135475;135476;135477;135478;135479 107841;107842;107843;107844;107845;107846;107847;107848;107849;107850;107851;107852;107853;107854;107855;107856;107857;107858 107846 16 FGQGVHHAASQVGK Unmodified 1421.7164 0.71639536 2981 Q6UWP8 SBSN Suprabasin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 13.4 13.496 3 0.0075974 11710 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.005 0 75973000 0 0 0 25650000 5972100 7380000 7017600 8835100 3081700 3518600 0 0 5509600 3365100 5643900 16194 2981 14752 135480;135481;135482;135483;135484;135485;135486;135487;135488;135489 107859;107860 107860 2 FGQGVHHTAGQVGK Unmodified 1421.7164 0.71639536 2981 Q6UWP8 SBSN Suprabasin yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 12.656 13.101 3 0.04555 11948 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 27.219 1.2416 21210000 0 0 0 0 0 0 0 0 0 0 6495000 14715000 0 0 0 16195 2981 14753 135490;135491 107861 107861 1 FGQMLGSNMTEFHSQISK 2 Oxidation (M) 2072.9296 0.92956053 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 2 0 By MS/MS 10 0 1 1 52.647 52.715 3 0.0011475 59868 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 42.382 33.45 10627000 0 0 0 0 0 0 10627000 0 0 0 0 0 0 0 0 16196 2392 14754 135492 107862 107862 3903;3904 0 FGQMLGSNMTEFHSQISK Oxidation (M) 2056.9346 0.93464591 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 1 0 By MS/MS 2 0 1 1 74.971 66.84 3 0.0017131 88426 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.326 36.477 20471000 20471000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16197 2392 14754 135493 107863 107863 3903;3904 1 FGQMLGSNMTEFHSQISK Unmodified 2040.9397 0.93973129 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS 2 0 1 1 80.91 72.779 3 0.012388 95449 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 32.121 26.481 11919000 11919000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16198 2392 14754 135494 107864 107864 1 FGQQNPR Unmodified 845.4144 0.41439968 3536 Q8WU90 ZC3H15 Zinc finger CCCH domain-containing protein 15 yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 8.8565 9.0112 2 0.023434 6437 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.306 68.38 18664000 0 0 0 0 0 1508200 3426400 1397300 1835000 2152500 0 3871600 0 0 4473200 16199 3536 14755 135495;135496;135497;135498;135499;135500;135501 107865 107865 1 FGQQNPRQVAQSEAEK Unmodified 1815.8864 0.88637381 3536 Q8WU90 ZC3H15 Zinc finger CCCH domain-containing protein 15 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 35.084 30.217 3 1.0581E-38 42189 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 115.8 102.37 181190000 176540000 0 4649700 0 0 0 0 0 0 0 0 0 0 0 0 16200 3536 14756 135502;135503 107866;107867 107867 2 FGQSAALTR Unmodified 949.49813 0.49812931 27 A6NFI3 ZNF316 Zinc finger protein 316 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 29.956 30.046 2 0.0099602 32887 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 65.224 44.525 38421000 0 0 0 5367500 5230200 4721900 5073800 0 2636400 0 7028400 8363000 0 0 0 16201 27 14757 135504;135505;135506;135507;135508;135509;135510 107868;107869;107870;107871;107872 107871 5 FGQYAGHVVPTILEK Unmodified 1657.8828 0.88279198 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 74.227 74.407 3 0.0009795 85274 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.143 33.673 33578000 0 0 0 0 0 3818800 0 0 4252500 4917900 5212100 3269900 0 0 12107000 16202 2361 14758 135511;135512;135513;135514;135515;135516 107873 107873 1 FGRELGDDCNFGPALGEVGEAMRELSEVK Unmodified 3181.4808 0.48084762 4075 Q99962 SH3GL2 Endophilin-A1 yes yes 0 0 2 By MS/MS 2 0 1 1 98.951 90.82 4 2.0201E-47 117154 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 108.75 103.54 30664000 30664000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16203 4075 14759 135517 107874 107874 1 FGRTDVAESEK Unmodified 1237.5939 0.59388018 2840;5195 Q641Q2;Q9Y4E1 FAM21A;FAM21C WASH complex subunit FAM21A;WASH complex subunit FAM21C no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 19.062 18.861 3 0.0044558 19145 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 56.087 43.471 285800000 185660000 0 0 6837800 5662400 6815900 7824800 5879100 6635100 9528100 8500300 11252000 9149000 7731300 14321000 16204 2840;5195 14760 135518;135519;135520;135521;135522;135523;135524;135525;135526;135527;135528;135529;135530 107875;107876;107877;107878;107879;107880;107881;107882;107883;107884;107885;107886;107887 107882 10 FGSAIPIPSLPDK Unmodified 1340.734 0.73400248 5252 Q9Y5X1 SNX9 Sorting nexin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84.69 83.715 2 0.00074264 97203 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 71.221 59.508 259130000 17045000 143810000 3688700 5329100 4305000 10276000 5869200 8043800 5917200 11936000 9562900 9695400 4527100 6871800 12250000 16205 5252 14761 135531;135532;135533;135534;135535;135536;135537;135538;135539;135540;135541;135542;135543;135544;135545 107888;107889;107890;107891;107892;107893;107894;107895;107896;107897;107898;107899;107900;107901 107888 14 FGSALVPTGNLQLR Unmodified 1471.8147 0.81471242 4231 Q9BXR0 QTRT1 Queuine tRNA-ribosyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 2 1 1 80.384 80.511 2 0.0040223 92758 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.63 39.958 57866000 0 0 0 0 0 3645000 0 4108800 0 5417900 7098300 9029200 7489800 5450000 15627000 16206 4231 14762 135546;135547;135548;135549;135550;135551;135552;135553;135554 107902;107903;107904;107905 107902 4 FGSDLQK Unmodified 793.39702 0.39701828 4076 Q99986 VRK1 Serine/threonine-protein kinase VRK1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 19.787 20.255 2 0.049926 19794 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 63.287 29.1 17586000 0 0 0 0 0 0 0 0 0 0 0 0 0 6580700 11005000 16207 4076 14763 135555;135556 107906 107906 1 FGSEFSPELQASFQK Unmodified 1700.8046 0.80460124 89 CON__Q3SX09 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 78.402 78.506 2 0.0011779 89998 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 58.676 43.137 + 39650000 0 0 0 0 3402500 3003100 2337600 4590400 2446500 5097100 3579300 4277200 2289600 2941400 5685600 16208 89 14764 135557;135558;135559;135560;135561;135562;135563;135564;135565;135566;135567 107907;107908;107909;107910;107911 107910 5 FGSFTYATTEK Unmodified 1250.5819 0.58191851 4946 Q9UJX5 ANAPC4 Anaphase-promoting complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 55.818 54.497 2 1.136E-16 73030 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 171.56 153.5 239150000 109270000 34911000 14594000 6572200 5734300 5581600 4117200 5120900 3742500 5691500 6238500 9619300 6325000 8713700 12918000 16209 4946 14765 135568;135569;135570;135571;135572;135573;135574;135575;135576;135577;135578;135579;135580;135581;135582;135583 107912;107913;107914;107915;107916;107917;107918;107919;107920;107921;107922;107923;107924;107925;107926;107927;107928;107929 107918 18 FGSGMNMGR Oxidation (M) 971.39532 0.39532049 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 17.776 17.964 2 0.0032538 18296 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 85.212 83.027 379810000 0 0 0 25046000 24289000 25562000 25392000 32022000 21978000 26736000 34883000 55040000 38217000 32401000 38244000 16210 1681 14766 135584;135585;135586;135587;135588;135589;135590;135591;135592;135593;135594;135595;135596;135597;135598;135599;135600;135601;135602;135603;135604;135605;135606;135607 107930;107931;107932;107933;107934;107935;107936;107937;107938;107939;107940;107941;107942;107943;107944;107945;107946;107947;107948;107949;107950 107949 2693;2694 15 FGSGMNMGR Unmodified 955.40041 0.40040587 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 33.537 33.733 2 2.6766E-05 37168 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 140.98 84.958 364780000 0 0 0 11942000 21569000 25390000 0 26558000 17502000 32493000 44839000 47173000 36041000 31833000 69444000 16211 1681 14766 135608;135609;135610;135611;135612;135613;135614;135615;135616;135617;135618 107951;107952;107953;107954;107955;107956;107957;107958;107959;107960;107961;107962;107963 107956 12 FGSGMNMGR 2 Oxidation (M) 987.39024 0.39023512 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 7.7091 7.8593 2 0.0017376 6094 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 77.923 72.833 266370000 0 0 0 11092000 0 13574000 20262000 0 18235000 27845000 51434000 38562000 34833000 26310000 24228000 16212 1681 14766 135619;135620;135621;135622;135623;135624;135625;135626;135627;135628 107964;107965;107966;107967;107968;107969;107970;107971;107972;107973;107974 107972 2693;2694 10 FGSLLPIHPVTSG Unmodified 1323.7187 0.71868677 2509 Q15257 PPP2R4 Serine/threonine-protein phosphatase 2A activator yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 88.383 83.237 2 0.00041079 105793 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 114.84 84.154 278470000 158050000 94407000 26009000 0 0 0 0 0 0 0 0 0 0 0 0 16213 2509 14767 135629;135630;135631 107975;107976;107977;107978 107977 4 FGSLTMDGGLR Oxidation (M) 1168.5547 0.55465791 4897 Q9UHD2 TBK1 Serine/threonine-protein kinase TBK1 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 52.171 52.143 2 0.00033917 59029 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 82.749 68.543 16219000 0 0 0 0 1689400 5715800 2896100 0 0 0 0 0 5918100 0 0 16214 4897 14768 135632;135633;135634;135635 107979;107980;107981 107979 6253 3 FGSNINLEADES Unmodified 1294.5677 0.56772501 4572 Q9NQP4 PFDN4 Prefoldin subunit 4 yes yes 0 0 0 By MS/MS By MS/MS 1 0 2 1 1 103.55 106.62 2 2.4388E-13 95854 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 162.88 150.25 113440000 39060000 74375000 0 0 0 0 0 0 0 0 0 0 0 0 0 16215 4572 14769 135636;135637 107982;107983 107983 2 FGSQASQK Unmodified 851.41373 0.41373097 3362 Q8N6T3 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching 7.71 3.61 2 5 1 1 1 1 1 1 1 5.9605 5.2298 2 0.026727 5495 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.16 49.127 297350000 0 283130000 7764500 840060 0 2234300 0 2272300 0 0 0 617670 0 493000 0 16216 3362 14770 135638;135639;135640;135641;135642;135643;135644 107984;107985 107984 1 FGSQRVLVEPDAGAGVAVMK Oxidation (M) 2046.0568 0.056809957 1445 P42126 ECI1 Enoyl-CoA delta isomerase 1, mitochondrial yes yes 0 1 1 By MS/MS 2 0 1 1 72.469 64.231 3 9.8169E-05 85096 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.529 39.45 80080000 80080000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16217 1445 14771 135645 107986 107986 2277 1 FGSQRVLVEPDAGAGVAVMK Unmodified 2030.0619 0.061895335 1445 P42126 ECI1 Enoyl-CoA delta isomerase 1, mitochondrial yes yes 0 0 1 By MS/MS 2 0 1 1 79.466 71.335 3 0.00013331 93637 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.834 50.941 113820000 113820000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16218 1445 14771 135646 107987 107987 1 FGSVPFTK Unmodified 881.4647 0.46470391 5058 Q9UPT5 EXOC7 Exocyst complex component 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 4 2 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 56.177 55.361 2 0.0047077 62987 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 113.41 87.585 157060000 348900 4199200 22238000 7730700 9443100 10170000 10748000 10689000 7636700 10548000 11729000 10265000 11532000 11334000 18452000 16219 5058 14772 135647;135648;135649;135650;135651;135652;135653;135654;135655;135656;135657;135658;135659;135660;135661;135662;135663;135664 107988;107989;107990;107991;107992;107993;107994;107995;107996;107997;107998;107999;108000;108001;108002;108003;108004 107998 17 FGTDLNQGEK Unmodified 1107.5197 0.51965261 4606 Q9NRL3 STRN4 Striatin-4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 30.689 29.704 2 1.5708E-21 37455 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 195.17 169.28 170650000 0 122900000 0 5361200 6379000 5120500 0 6290500 0 7386600 0 0 10409000 6804100 0 16220 4606 14773 135665;135666;135667;135668;135669;135670;135671;135672;135673;135674 108005;108006;108007;108008;108009;108010;108011 108008 6 FGTEELFK Unmodified 969.48075 0.48074791 2451;2201 Q12873;Q14839 CHD3;CHD4 Chromodomain-helicase-DNA-binding protein 3;Chromodomain-helicase-DNA-binding protein 4 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66.483 65.885 2 0.0024352 84301 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.01 87.913 883520000 0 296570000 29339000 26706000 25806000 51467000 40725000 30294000 37729000 54325000 61049000 54171000 55490000 56326000 63522000 16221 2201;2451 14774 135675;135676;135677;135678;135679;135680;135681;135682;135683;135684;135685;135686;135687;135688 108012;108013;108014;108015;108016;108017;108018;108019;108020;108021;108022;108023;108024 108014 11 FGTEELFKDEATDGGGDNK Unmodified 2028.8912 0.891244 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 62.999 63.121 3 0.017378 72027 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 27.224 22.42 39386000 0 0 0 0 5543800 0 6364100 11093000 0 0 9001800 7383400 0 0 0 16222 2451 14775 135689;135690;135691;135692;135693 108025;108026 108025 2 FGTEWAQNTIVPK Unmodified 1489.7565 0.75652884 1272 P30154 PPP2R1B Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 6 4 3 3 1 1 1 1 1 1 77.734 75.255 2 7.9126E-06 94044 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.39 84.762 251310000 35243000 171230000 17679000 0 0 0 0 6003900 0 9534400 0 0 0 0 11621000 16223 1272 14776 135694;135695;135696;135697;135698;135699 108027;108028;108029;108030;108031 108028 4 FGTFGGLGSK Unmodified 969.49198 0.4919813 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58.009 56.911 2 0.001444 64732 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 95.608 77.283 341420000 23684000 10609000 4308700 21018000 17042000 21329000 21570000 19143000 19171000 17885000 27266000 35598000 30604000 23046000 49148000 16224 2172 14777 135700;135701;135702;135703;135704;135705;135706;135707;135708;135709;135710;135711;135712;135713;135714 108032;108033;108034;108035;108036;108037;108038;108039;108040;108041;108042;108043;108044;108045 108040 8 FGTGGAAVPEK Unmodified 1032.524 0.52400971 2397 Q14241 TCEB3 Transcription elongation factor B polypeptide 3 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 35.261 30.586 2 0.00085686 40073 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.309 57.334 147750000 0 147750000 0 0 0 0 0 0 0 0 0 0 0 0 0 16225 2397 14778 135715;135716 108046;108047;108048 108046 3 FGTINIVHPK Unmodified 1124.6342 0.63422886 5261 Q9Y617 PSAT1 Phosphoserine aminotransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 4 3.46 3 1 1 1 1 1 61.086 56.751 2 2.5026E-60 77510 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 221.94 202.85 110940000 75756000 12119000 7747500 0 0 0 0 0 0 0 0 0 0 0 15313000 16226 5261 14779 135717;135718;135719;135720 108049;108050;108051;108052;108053;108054 108052 5 FGTLLSGSWDTTAK Unmodified 1482.7355 0.73545904 5085 Q9Y263 PLAA Phospholipase A-2-activating protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 84.195 79.074 2 3.8885E-18 99531 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.68 112.99 276000000 147150000 115960000 12889000 0 0 0 0 0 0 0 0 0 0 0 0 16227 5085 14780 135721;135722;135723 108055;108056;108057 108055 3 FGTLNGFQILHDR Unmodified 1516.7787 0.77866126 3701;164 O00507;Q93008 USP9Y;USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-Y;Probable ubiquitin carboxyl-terminal hydrolase FAF-X no no 0 0 0 By MS/MS 10 0 1 1 79.254 79.5 3 0.0032543 91553 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.552 31.502 9350100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9350100 16228 164;3701 14781 135724 108058 108058 1 FGTNFTK Unmodified 813.4021 0.40210366 185 O14530 TXNDC9 Thioredoxin domain-containing protein 9 yes yes 0 0 0 By MS/MS By MS/MS By matching 2 0 3 1 1 1 38.548 33.541 2 0.046175 46685 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 124.34 5.6563 401000000 185820000 170530000 44648000 0 0 0 0 0 0 0 0 0 0 0 0 16229 185 14782 135725;135726;135727 108059 108059 0 FGTSETSK Unmodified 855.39741 0.39741221 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 8.8249 8.207 2 0.04585 9491 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.214 22.332 216120000 10203000 155490000 1551100 0 3634500 4847200 5151400 6210300 5044600 4390600 0 4788200 5446100 3372400 5996400 16230 1601 14783 135728;135729;135730;135731;135732;135733;135734;135735;135736;135737;135738;135739;135740 108060;108061;108062 108060 3 FGTTAVPTYQVGR Unmodified 1395.7147 0.71466402 3950 Q96PZ0 PUS7 Pseudouridylate synthase 7 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.643 60.748 2 0.0043343 69503 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 50.791 29.792 131950000 0 0 0 6629100 7120000 6822300 10403000 6316400 5928200 10485000 15464000 15771000 10024000 11498000 25493000 16231 3950 14784 135741;135742;135743;135744;135745;135746;135747;135748;135749;135750;135751;135752 108063;108064;108065;108066;108067;108068;108069 108064 6 FGVEQDRMDK Unmodified 1223.5605 0.56047157 2399 Q14247 CTTN Src substrate cortactin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.57 3.96 3 4 1 1 1 1 1 1 1 30.105 28.309 3 0.0051433 29834 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 61.161 53.057 274070000 16935000 34216000 57942000 0 0 26423000 0 0 0 32631000 0 50517000 0 0 55406000 16232 2399 14785 135753;135754;135755;135756;135757;135758;135759 108070;108071;108072 108072 3 FGVEQDRMDK Oxidation (M) 1239.5554 0.55538619 2399 Q14247 CTTN Src substrate cortactin yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 17.826 17.348 2;3 0.025931 21872 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 105.1 76.883 166390000 0 19871000 24019000 12430000 12537000 0 12036000 11070000 9811500 11616000 0 24746000 15579000 12681000 0 16233 2399 14785 135760;135761;135762;135763;135764;135765;135766;135767;135768;135769;135770 108073;108074;108075 108074 0 FGVEQDVDMVFASFIRK Oxidation (M) 2002.9822 0.98224803 1000 P14618 PKM Pyruvate kinase PKM yes yes 0 1 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 98.931 93.547 3 2.8139E-05 117191 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.788 69.436 50413000 21629000 28784000 0 0 0 0 0 0 0 0 0 0 0 0 0 16234 1000 14786 135771;135772;135773 108076;108077;108078 108076 1356 3 FGVEQDVDMVFASFIRK Unmodified 1986.9873 0.98733341 1000 P14618 PKM Pyruvate kinase PKM yes yes 0 0 1 By MS/MS By MS/MS 2.4 0.49 3 2 2 3 100.22 95.335 3 1.0136E-46 118884 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 137.44 114.3 85138000 61298000 23840000 0 0 0 0 0 0 0 0 0 0 0 0 0 16235 1000 14786 135774;135775;135776;135777;135778 108079;108080;108081;108082;108083;108084;108085 108085 7 FGVEQPEGDEDLTK Unmodified 1562.71 0.71003215 1179 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 2 1 1 1 1 1 1 1 55.085 52.857 2 1.2145E-31 66320 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 152.67 115.33 269680000 10619000 204310000 0 14623000 0 0 0 0 0 0 14277000 0 13432000 0 12417000 16236 1179 14787 135779;135780;135781;135782;135783;135784;135785;135786;135787;135788;135789 108086;108087;108088;108089;108090;108091;108092;108093;108094;108095 108088 10 FGVIFAGAQK Unmodified 1036.5706 0.57056597 5261 Q9Y617 PSAT1 Phosphoserine aminotransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.55 1 1 4 1 1 1 1 1 1 71.524 69.78 2 0.0016937 78855 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.296 74.359 505100000 356130000 43340000 0 0 0 0 0 0 0 0 18831000 15447000 0 12096000 59261000 16237 5261 14788 135790;135791;135792;135793;135794;135795 108096;108097;108098;108099;108100;108101 108096 5 FGVLSDNFK Unmodified 1025.5182 0.51819605 2124 Q06203 PPAT Amidophosphoribosyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.29 3.65 3 2 9 2 2 1 1 1 1 1 1 1 1 1 1 70.301 68.712 2 0.0013351 90291 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 119.17 96.154 575080000 299530000 148270000 74414000 0 0 3556600 2258000 0 2268000 6131200 7035600 7670900 4154500 5391400 14402000 16238 2124 14789 135796;135797;135798;135799;135800;135801;135802;135803;135804;135805;135806;135807;135808;135809 108102;108103;108104;108105;108106;108107;108108;108109 108105 8 FGVPAEGR Unmodified 831.4239 0.42390173 4948 Q9UJY1 HSPB8 Heat shock protein beta-8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.052 35.233 2 0.017183 38775 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 66.073 28.427 212910000 0 0 0 12185000 11731000 13797000 16838000 15527000 11683000 17560000 18797000 25193000 22030000 16129000 31438000 16239 4948 14790 135810;135811;135812;135813;135814;135815;135816;135817;135818;135819;135820;135821 108110;108111 108111 2 FGVPVIADGGIQNVGHIAK Unmodified 1891.0316 0.031581485 964 P12268 IMPDH2 Inosine-5'-monophosphate dehydrogenase 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 81.735 81.882 3 9.4045E-12 94395 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.648 57.807 89695000 0 0 0 0 0 5379100 3633300 5890100 5785900 6931400 9915500 8234500 0 6205300 37720000 16240 964 14791 135822;135823;135824;135825;135826;135827;135828;135829;135830 108112;108113;108114;108115;108116;108117;108118 108114 7 FGVQMDRVDQSAVGFEYQGK Unmodified 2260.0583 0.058266521 2399 Q14247 CTTN Src substrate cortactin yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 80.285 74.319 3 2.1809E-17 95756 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 100.39 92.029 22976000 22976000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16241 2399 14792 135831;135832 108119;108120;108121 108121 3 FGVQMDRVDQSAVGFEYQGK Oxidation (M) 2276.0532 0.053181143 2399 Q14247 CTTN Src substrate cortactin yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 66.854 67.124 3 1.4504E-07 76823 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 67.928 62.926 28039000 0 0 0 0 0 0 0 0 0 11689000 0 16350000 0 0 0 16242 2399 14792 135833;135834;135835 108122;108123 108123 3933 2 FGVQSERQDSAAVGFDYK Unmodified 2002.9385 0.93846896 2399 Q14247 CTTN Src substrate cortactin yes yes 0 0 1 By MS/MS By matching By matching By matching By matching By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 62.78 61.579 3 0.00031216 82257 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.541 43.473 36349000 19795000 0 0 0 0 3179100 0 0 2691000 2490900 0 0 0 2057100 6135800 16243 2399 14793 135836;135837;135838;135839;135840;135841 108124;108125 108125 1 FGVQTDR Unmodified 821.40317 0.40316629 2399 Q14247 CTTN Src substrate cortactin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 21.441 21.619 2 0.038679 20019 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 69.383 8.7015 99339000 0 0 0 15548000 4652100 15530000 3620300 4587600 4617200 0 0 13581000 23518000 4596900 9088600 16244 2399 14794 135842;135843;135844;135845;135846;135847;135848;135849;135850;135851 108126;108127 108127 2 FGVQTDRQDK Unmodified 1192.5836 0.58364985 2399 Q14247 CTTN Src substrate cortactin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.96 3.45 6 1 20 2 3 2 2 1 1 1 1 2 2 2 2 2 2 2 17.275 16.471 2;3 4.3427E-05 21400 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 142.98 101.95 1036700000 303520000 55920000 161340000 30187000 29272000 26337000 25185000 21116000 32743000 41065000 60381000 72859000 58499000 49885000 68404000 16245 2399 14795 135852;135853;135854;135855;135856;135857;135858;135859;135860;135861;135862;135863;135864;135865;135866;135867;135868;135869;135870;135871;135872;135873;135874;135875;135876;135877;135878 108128;108129;108130;108131;108132;108133;108134;108135;108136;108137;108138;108139;108140;108141;108142;108143;108144;108145 108141 12 FGVSSESKPEEVK Unmodified 1421.7038 0.70382456 1600 P49790 NUP153 Nuclear pore complex protein Nup153 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 32.506 31.444 3 1.3997E-06 39722 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 102.73 88.473 891970000 16053000 179110000 50149000 27138000 35933000 54620000 48605000 49549000 44346000 58246000 50508000 89450000 61601000 60903000 65761000 16246 1600 14796 135879;135880;135881;135882;135883;135884;135885;135886;135887;135888;135889;135890;135891;135892;135893;135894 108146;108147;108148;108149;108150;108151;108152;108153;108154;108155;108156;108157;108158;108159;108160 108155 12 FGVSSESKPEEVKK Unmodified 1549.7988 0.79878758 1600 P49790 NUP153 Nuclear pore complex protein Nup153 yes yes 0 0 2 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24.192 23.747 3 0.0034635 24139 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.351 41.47 177130000 7407100 0 9640100 10529000 12951000 3848600 14941000 12037000 5068900 13221000 17158000 20468000 17134000 12384000 20343000 16247 1600 14797 135895;135896;135897;135898;135899;135900;135901;135902;135903;135904;135905;135906;135907;135908 108161;108162;108163;108164 108164 2 FGVSSSSSGPSQTLTSTGNFK Unmodified 2074.9807 0.98072771 1600 P49790 NUP153 Nuclear pore complex protein Nup153 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.72 2.93 4 21 1 2 1 2 2 1 2 2 2 2 1 2 1 2 2 66.182 65.305 2;3 3.6774E-47 84582 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 153.67 141.1 527380000 53315000 51484000 2456300 19560000 21545000 18607000 30251000 38643000 21245000 34722000 28417000 53181000 25681000 46202000 82074000 16248 1600 14798 135909;135910;135911;135912;135913;135914;135915;135916;135917;135918;135919;135920;135921;135922;135923;135924;135925;135926;135927;135928;135929;135930;135931;135932;135933 108165;108166;108167;108168;108169;108170;108171;108172;108173;108174;108175;108176;108177;108178;108179;108180 108174 16 FGVSSVAEAMALGR Oxidation (M) 1409.6973 0.6972994 1234 P28340 POLD1 DNA polymerase delta catalytic subunit yes yes 0 1 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 2 2 1 2 1 2 2 2 2 1 2 71.823 71.91 2 0.00022628 81717 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 77.379 52.535 96665000 0 0 0 1664400 6556800 10532000 4376200 8096100 3544600 13509000 11832000 13980000 9146300 3915300 9513100 16249 1234 14799 135934;135935;135936;135937;135938;135939;135940;135941;135942;135943;135944;135945;135946;135947;135948;135949;135950;135951;135952;135953 108181;108182;108183;108184;108185;108186;108187;108188;108189;108190;108191 108187 1826 10 FGVSSVAEAMALGR Unmodified 1393.7024 0.70238478 1234 P28340 POLD1 DNA polymerase delta catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 84.787 84.929 2 0.0019335 97555 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 53.569 27.947 30684000 0 0 0 0 0 0 0 4134600 0 4561600 3753900 3068200 1612400 2481600 11072000 16250 1234 14799 135954;135955;135956;135957;135958;135959;135960 108192;108193;108194;108195;108196;108197;108198 108196 7 FGVSTGREGQTPK Unmodified 1362.6892 0.68917755 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 3 15 1 1 1 1 1 1 1 1 1 1 1 1 2 2 2 25.883 25.358 2;3 0.0042655 35276 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.915 36.702 391090000 162680000 10599000 9943700 13345000 10993000 9577100 19606000 15106000 18181000 14260000 14282000 28548000 21141000 17129000 25699000 16251 2172 14800 135961;135962;135963;135964;135965;135966;135967;135968;135969;135970;135971;135972;135973;135974;135975;135976;135977;135978 108199;108200;108201;108202;108203;108204;108205;108206;108207;108208;108209 108204 10 FGVTSGSSELEK Unmodified 1239.5983 0.59829686 3176 Q86VX2 COMMD7 COMM domain-containing protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.17 3.85 2 1 3 2 1 1 1 1 45.784 43.471 2 0.00018424 55690 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.63 101.48 388170000 0 357570000 2547600 0 2993100 0 0 0 0 0 0 0 0 6278700 18780000 16252 3176 14801 135979;135980;135981;135982;135983;135984 108210;108211;108212 108210 1 FGVVLDEIK Unmodified 1018.5699 0.56989727 190 O14579 COPE Coatomer subunit epsilon yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 77.506 76.846 2 0.0031541 88596 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 92.439 58.643 299580000 0 60058000 63213000 3205300 5256800 22267000 8659500 8762200 14078000 21061000 21104000 18298000 15760000 1067300 36794000 16253 190 14802 135985;135986;135987;135988;135989;135990;135991;135992;135993;135994;135995;135996;135997;135998;135999 108213;108214;108215;108216;108217;108218;108219;108220;108221;108222;108223;108224 108214 12 FGVVLDEIKPSSAPELQAVR Unmodified 2154.1685 0.1684689 190 O14579 COPE Coatomer subunit epsilon yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 83.24 83.386 3 2.2202E-28 96165 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 103.17 95.178 154980000 0 0 0 0 0 3606700 2330900 5992100 8565900 22845000 14260000 8253600 0 8754200 80373000 16254 190 14803 136000;136001;136002;136003;136004;136005;136006;136007;136008 108225;108226;108227;108228;108229;108230;108231;108232;108233 108227 9 FGVVTEVVMIYDAEK Unmodified 1698.8539 0.85385962 3818 Q96EP5 DAZAP1 DAZ-associated protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 98.331 90.201 2 2.4778E-06 116338 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 137.55 123.13 58715000 58715000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16255 3818 14804 136009 108234 108234 1 FGVVTEVVMIYDAEK Oxidation (M) 1714.8488 0.84877424 3818 Q96EP5 DAZAP1 DAZ-associated protein 1 yes yes 0 1 0 By MS/MS 2 0 1 1 96.969 88.838 2 1.6078E-17 114701 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 134.75 117.39 25660000 25660000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16256 3818 14804 136010 108235 108235 5344 0 FGVVVVGVGR Unmodified 987.58655 0.58655038 1708 P53004 BLVRA Biliverdin reductase A yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 71.595 71.728 2 0.004536 81591 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.485 57.949 68220000 0 0 0 0 2062200 6007000 4064400 3357000 3300600 6141700 7676800 10997000 3274300 6132800 15206000 16257 1708 14805 136011;136012;136013;136014;136015;136016;136017;136018;136019;136020;136021 108236;108237;108238;108239;108240;108241;108242;108243;108244 108238 9 FGVYDIDNK Unmodified 1069.508 0.50802529 458 O75131 CPNE3 Copine-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58.887 57.559 2 0.0084462 66685 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 69.598 41.424 671240000 20210000 498500000 11137000 14152000 5916500 24834000 7022700 10415000 0 14031000 11979000 0 17358000 10332000 25354000 16258 458 14806 136022;136023;136024;136025;136026;136027;136028;136029;136030;136031;136032;136033;136034;136035 108245;108246;108247;108248;108249;108250;108251;108252;108253 108253 9 FGYDEIDNGYLK Unmodified 1432.6511 0.65106071 2494 Q15067 ACOX1 Peroxisomal acyl-coenzyme A oxidase 1 yes yes 0 0 0 By MS/MS 10 0 1 1 74.802 74.255 2 0.0048521 86117 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 70.908 62.983 10032000 0 0 0 10032000 0 0 0 0 0 0 0 0 0 0 0 16259 2494 14807 136036 108254 108254 1 FGYQFTQQGPR Unmodified 1327.6309 0.63093439 4746 Q9NYL9 TMOD3 Tropomodulin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 57.758 57.95 2 3.6996E-148 66611 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 226.04 210.89 593210000 0 0 0 0 57833000 42903000 58230000 0 32849000 70468000 83823000 92915000 51372000 50646000 52176000 16260 4746 14808 136037;136038;136039;136040;136041;136042;136043;136044;136045;136046;136047 108255;108256;108257;108258;108259;108260;108261;108262;108263;108264;108265;108266;108267;108268;108269;108270 108269 15 FGYTVSEENYMCR Unmodified 1654.6756 0.67557768 3814 Q96EK6 GNPNAT1 Glucosamine 6-phosphate N-acetyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 65.503 65.799 2 0.00065043 75281 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 91.584 65.925 20893000 0 0 0 0 0 0 0 0 0 4290700 7177400 9425000 0 0 0 16261 3814 14809 136048;136049;136050 108271;108272;108273 108272 3 FGYTVSEENYMCR Oxidation (M) 1670.6705 0.6704923 3814 Q96EK6 GNPNAT1 Glucosamine 6-phosphate N-acetyltransferase yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 54.702 54.705 2 0.00034357 61867 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 78.655 74.892 34524000 0 0 0 4509700 5833900 0 0 0 1816200 0 8909100 13455000 0 0 0 16262 3814 14809 136051;136052;136053;136054;136055 108274;108275;108276 108275 5339 3 FGYTVSEENYMCRR Unmodified 1810.7767 0.77668871 3814 Q96EK6 GNPNAT1 Glucosamine 6-phosphate N-acetyltransferase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 58.162 58.444 3 0.0034408 66248 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 40.025 39.393 24151000 0 0 0 0 0 4074000 0 0 0 4166500 7110700 8799500 0 0 0 16263 3814 14810 136056;136057;136058;136059 108277;108278 108278 2 FGYVDFESAEDLEK Unmodified 1647.7304 0.73043325 1085 P19338 NCL Nucleolin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 82.381 80.941 2 6.1888E-39 99587 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 194.17 188.19 1183400000 316280000 676580000 33498000 0 0 12558000 8341200 0 14999000 31743000 0 19478000 0 23790000 46114000 16264 1085 14811 136060;136061;136062;136063;136064;136065;136066;136067;136068;136069;136070 108279;108280;108281;108282;108283;108284;108285;108286;108287;108288;108289;108290;108291 108282 13 FHALGPIYYR Unmodified 1235.6451 0.64512789 4984 Q9UL25 RAB21 Ras-related protein Rab-21 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 65.22 65.476 3 0.04973 74223 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 27.329 22.349 41281000 0 0 0 0 0 4726400 0 0 3266400 0 3440300 7865100 2830000 3801100 15352000 16265 4984 14812 136071;136072;136073;136074;136075;136076;136077 108292 108292 1 FHAQHEGESVSYAK Unmodified 1588.727 0.72701962 2551 Q15596 NCOA2 Nuclear receptor coactivator 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 20.84 21.085 3 0.00066672 21911 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 61.532 47.352 38235000 0 0 0 0 0 0 4320700 7107000 4231700 0 6520300 0 8850400 7205300 0 16266 2551 14813 136078;136079;136080;136081;136082;136083 108293;108294;108295 108295 3 FHDIDDVK Unmodified 987.46616 0.46616048 4374 Q9H2U2 PPA2 Inorganic pyrophosphatase 2, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 31.759 27.894 2 0.0046994 34943 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 128.61 90.369 33709000 0 16887000 16822000 0 0 0 0 0 0 0 0 0 0 0 0 16267 4374 14814 136084;136085 108296;108297;108298;108299 108299 4 FHEAQLSEK Unmodified 1087.5298 0.52982336 533 O75694 NUP155 Nuclear pore complex protein Nup155 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 21.129 20.287 2 0.00094406 27900 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 143.03 108.86 467560000 69142000 95395000 180090000 6807400 7383900 14439000 9638800 11105000 7527300 20952000 17578000 0 14112000 13387000 0 16268 533 14815 136086;136087;136088;136089;136090;136091;136092;136093;136094;136095;136096;136097;136098 108300;108301;108302;108303;108304;108305;108306;108307;108308 108303 8 FHEAWQK Unmodified 944.45045 0.45045083 4598 Q9NRF8 CTPS2 CTP synthase 2 yes yes 0 0 0 By MS/MS 2 0 1 1 30.963 25.245 2 0.040818 35433 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 138.07 127.77 127510000 127510000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16269 4598 14816 136099 108309 108309 0 FHFVDLAGSER Unmodified 1276.62 0.62003536 3101 Q7Z4S6;O75037 KIF21A;KIF21B Kinesin-like protein KIF21A;Kinesin-like protein KIF21B no no 0 0 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 67.07 67.223 3 0.0073502 76140 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.995 34.953 66142000 0 0 0 0 1004500 7393400 0 4080300 5152300 4925000 4758800 10087000 6772100 7030600 14938000 16270 3101 14817 136100;136101;136102;136103;136104;136105;136106;136107;136108;136109 108310;108311;108312;108313;108314;108315 108311 6 FHGILDQGEGVLIIFDEPPVDK Unmodified 2437.2529 0.25292681 129 O00231 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 0 0 0 By MS/MS By MS/MS By matching 2.33 0.471 4 2 3 2 1 98.356 93.311 2;3 6.1756E-131 117058 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 265.45 253.43 327350000 299440000 26881000 1035700 0 0 0 0 0 0 0 0 0 0 0 0 16271 129 14818 136110;136111;136112;136113;136114;136115 108316;108317;108318;108319;108320;108321 108321 5 FHHTFSTEIAK Unmodified 1316.6513 0.65133548 982 P13667 PDIA4 Protein disulfide-isomerase A4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.4 3.68 4 1 10 2 2 1 1 1 1 1 2 1 1 1 1 37.018 35.893 3 3.9981E-06 52178 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 99.752 80.652 1063500000 211600000 82029000 7511300 0 0 13910000 0 20410000 28924000 32914000 71096000 90542000 73092000 69776000 361680000 16272 982 14819 136116;136117;136118;136119;136120;136121;136122;136123;136124;136125;136126;136127;136128;136129;136130 108322;108323;108324;108325;108326;108327;108328;108329;108330;108331 108326 5 FHIGCEK Unmodified 889.41162 0.41162248 3701 Q93008 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 0 0 0 By MS/MS By MS/MS By matching 2 0 3 1 1 1 28.953 24.579 2 0.03416 34792 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.265 48.709 174820000 146370000 10385000 18072000 0 0 0 0 0 0 0 0 0 0 0 0 16273 3701 14820 136131;136132;136133 108332 108332 1 FHLEANNK Unmodified 971.48248 0.48247924 4642 Q9NUA8 ZBTB40 Zinc finger and BTB domain-containing protein 40 yes yes 0 0 0 By MS/MS 2 0 1 1 25.735 20.512 2 0.012995 29146 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.457 69.098 11481000 11481000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16274 4642 14821 136134 108333 108333 1 FHMDSETHDPIDLQTK Unmodified 1912.8625 0.86252683 5110 Q9Y2L1 DIS3 Exosome complex exonuclease RRP44 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 56.955 57.338 3 0.0085288 64395 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.098 30.251 16689000 0 0 0 0 0 0 0 0 0 4169200 0 0 0 0 12519000 16275 5110 14822 136135;136136 108334 108334 1 FHMVDGNVSGEFTDLVPEK Oxidation (M) 2135.9834 0.98337024 661 O95433 AHSA1 Activator of 90 kDa heat shock protein ATPase homolog 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 5.3 3.85 5 1 4 1 3 2 1 1 1 1 79.757 76.871 2;3 1.0179E-14 93878 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 106.44 102.17 756940000 51299000 626080000 61899000 0 2066500 0 3697700 0 0 0 11902000 0 0 0 0 16276 661 14823 136137;136138;136139;136140;136141;136142;136143;136144;136145;136146 108335;108336;108337;108338;108339;108340;108341 108341 799 7 FHMVDGNVSGEFTDLVPEK Unmodified 2119.9885 0.98845562 661 O95433 AHSA1 Activator of 90 kDa heat shock protein ATPase homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 2 2 1 86.735 81.381 2;3 0.000364 100049 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 52.19 47.573 491160000 114020000 362880000 14258000 0 0 0 0 0 0 0 0 0 0 0 0 16277 661 14823 136147;136148;136149;136150;136151 108342;108343;108344;108345;108346 108346 4 FHNELNAHIK Unmodified 1221.6255 0.62545508 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 1 2 1 1 1 1 2 1 1 1 1 1 31.188 30.177 2;3 0.00032489 31099 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 114.89 88.776 620990000 109730000 34634000 0 0 0 35315000 21680000 18745000 23952000 42344000 42797000 88168000 29688000 43238000 130700000 16278 965 14824 136152;136153;136154;136155;136156;136157;136158;136159;136160;136161;136162;136163;136164;136165 108347;108348;108349;108350;108351;108352;108353;108354;108355;108356;108357;108358;108359;108360;108361 108356 15 FHPDTDDVPVPAPAGDQK Unmodified 1904.8905 0.89045614 2082 Q02818 NUCB1 Nucleobindin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 1 4 1 63.233 57.501 2;3 4.8228E-08 74081 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.902 86.341 200220000 16925000 176000000 7286600 0 0 0 0 0 0 0 0 0 0 0 0 16279 2082 14825 136166;136167;136168;136169;136170;136171 108362;108363;108364;108365;108366;108367;108368 108363 7 FHPEPYGLEDDQR Unmodified 1601.711 0.71103521 426 O60716 CTNND1 Catenin delta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.845 49.003 3 0.0036272 55340 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 48.532 43.253 251340000 0 0 0 10400000 9014100 15860000 14095000 11958000 12345000 22753000 21988000 35003000 26706000 26167000 45053000 16280 426 14826 136172;136173;136174;136175;136176;136177;136178;136179;136180;136181;136182;136183 108369;108370 108369 2 FHPFTPCIAVADK Unmodified 1501.7388 0.73877028 3304 Q8N122 RPTOR Regulatory-associated protein of mTOR yes yes 0 0 0 By MS/MS 2 0 1 1 80.467 72.337 3 0.0068367 94996 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.467 32.117 29899000 29899000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16281 3304 14827 136184 108371 108371 0 FHPIQGHR Unmodified 990.51478 0.51478242 2243 Q13151 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 10.614 10.879 2 0.041224 8644 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.039 39.572 5046300 0 0 0 0 0 0 0 0 0 619630 0 0 0 0 4426700 16282 2243 14828 136185;136186 108372 108372 1 FHPNSNYLATGSTDK Unmodified 1650.7638 0.76379906 513 O75529 TAF5L TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 2 1 1 45.773 39.784 2;3 0.00057608 55274 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.813 71.133 56810000 45919000 1864100 9027100 0 0 0 0 0 0 0 0 0 0 0 0 16283 513 14829 136187;136188;136189;136190 108373;108374;108375;108376;108377;108378;108379 108377 7 FHPNSNYVATGSADR Unmodified 1634.7437 0.74373232 2545 Q15542 TAF5 Transcription initiation factor TFIID subunit 5 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 32.008 32.404 3 0.01388 34301 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 20.828 18.131 16969000 0 0 0 0 0 0 0 0 0 2745000 3144700 0 3441500 2549300 5088600 16284 2545 14830 136191;136192;136193;136194;136195 108380 108380 1 FHQFLVSETESGNISR Unmodified 1849.8959 0.89587586 2168 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 62.36 62.72 3 0.0036541 70737 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.386 31.047 15008000 0 0 0 0 0 0 0 0 0 8942300 0 0 0 0 6065400 16285 2168 14831 136196;136197 108381 108381 1 FHQSIGK Unmodified 815.42899 0.42898711 4846 Q9UBL3 ASH2L Set1/Ash2 histone methyltransferase complex subunit ASH2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 13.501 10.345 2 0.021122 15436 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.63 47.919 111630000 94421000 0 17210000 0 0 0 0 0 0 0 0 0 0 0 0 16286 4846 14832 136198;136199 108382;108383 108382 2 FHSASASRNEGGNSESSLK Unmodified 1963.8984 0.89839506 3241 Q8IWI9 MGA MAX gene-associated protein yes yes 0 0 1 By MS/MS 2 0 1 1 18.925 14.341 3 0.00063156 20951 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.779 43.722 11184000 11184000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16287 3241 14833 136200 108384;108385 108385 2 FHTEALTALLSDDSK Unmodified 1646.8152 0.81516593 1902 P62495 ETF1 Eukaryotic peptide chain release factor subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By matching By matching By MS/MS 5.22 3.84 12 2 9 8 4 2 1 1 1 1 1 1 1 1 1 83.944 80.386 2;3 2.5806E-116 102061 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 225.55 206.31 1912800000 876070000 930460000 32000000 0 0 7582100 0 3162700 3711800 8077400 6879200 5578800 1773400 4400700 33156000 16288 1902 14834 136201;136202;136203;136204;136205;136206;136207;136208;136209;136210;136211;136212;136213;136214;136215;136216;136217;136218;136219;136220;136221;136222;136223 108386;108387;108388;108389;108390;108391;108392;108393;108394;108395;108396;108397;108398;108399;108400;108401;108402;108403 108387 14 FHTESLQGR Unmodified 1073.5254 0.52540669 3925 Q96MH2 HEXIM2 Protein HEXIM2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 21.141 21.35 2 0.0096665 22544 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.073 19.647 41072000 0 0 0 2539900 3625600 4646200 3597900 1910400 0 3461100 3884700 5419800 3898300 3078900 5009300 16289 3925 14835 136224;136225;136226;136227;136228;136229;136230;136231;136232;136233;136234 108404;108405;108406;108407;108408 108404 5 FHTGLVDAHLYCLKK Unmodified 1800.9345 0.93450998 4593 Q9NR50 EIF2B3 Translation initiation factor eIF-2B subunit gamma yes yes 0 0 1 By MS/MS 10 0 1 1 23.799 23.793 4 0.045658 25139 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 11.692 1.6343 2720000 0 0 0 0 0 0 2720000 0 0 0 0 0 0 0 0 16290 4593 14836 136235 108409 108409 1 FHTITTSYYR Unmodified 1287.6248 0.62478638 1830 P61026 RAB10 Ras-related protein Rab-10 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 21 2 2 1 2 2 2 2 2 2 1 1 2 45.236 45.399 2;3 0.00077087 49605 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 120.07 105.4 343450000 0 0 0 14828000 10848000 5176100 24731000 38908000 19172000 32228000 55893000 49584000 9649300 8181900 74252000 16291 1830 14837 136236;136237;136238;136239;136240;136241;136242;136243;136244;136245;136246;136247;136248;136249;136250;136251;136252;136253;136254;136255;136256 108410;108411;108412;108413;108414;108415;108416;108417;108418;108419;108420;108421;108422;108423 108412 13 FHTVSGSK Unmodified 861.43447 0.43446642 4056 Q99729 HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 8.6276 5.5078 2 0.012959 9700 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.523 77.968 2150600000 1340400000 282040000 528130000 0 0 0 0 0 0 0 0 0 0 0 0 16292 4056 14838 136257;136258;136259;136260 108424;108425;108426;108427;108428 108426 4 FHVEEEGK Unmodified 973.45051 0.45051041 733;837 P00558;P07205 PGK1;PGK2 Phosphoglycerate kinase 1;Phosphoglycerate kinase 2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.44 3.98 4 5 1 2 1 1 1 1 1 1 16.501 16.027 2 1.7555E-07 14500 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 161.68 137.05 2469500000 238650 461340000 641800000 0 0 0 0 0 0 18592000 225430000 199480000 0 188320000 734240000 16293 733;837 14839 136261;136262;136263;136264;136265;136266;136267;136268;136269 108429;108430;108431;108432;108433;108434;108435;108436;108437 108431 6 FIADGGPEVETIALQNNR Unmodified 1942.9749 0.97485447 3251 Q8IWZ8 SUGP1 SURP and G-patch domain-containing protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 77.826 77.913 2 1.6368E-29 90108 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 138.94 123.05 35963000 0 0 0 0 3920400 5562600 4228300 0 2986800 0 5490000 0 0 5297000 8478400 16294 3251 14840 136270;136271;136272;136273;136274;136275;136276;136277;136278 108438;108439;108440;108441;108442;108443;108444 108441 7 FIAEEAAASGAK Unmodified 1163.5823 0.58225287 205 O14732 IMPA2 Inositol monophosphatase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 37.602 36.701 2 0.00074676 41328 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 92.538 60.184 181620000 9525000 21288000 0 35681000 6639300 12097000 8815900 11978000 5562000 12512000 0 24261000 12623000 20642000 0 16295 205 14841 136279;136280;136281;136282;136283;136284;136285;136286;136287;136288;136289;136290;136291 108445;108446;108447;108448;108449;108450;108451;108452;108453;108454;108455;108456 108455 11 FIAELGVPLSQVK Unmodified 1399.8075 0.80750177 3131 Q86T24 ZBTB33 Transcriptional regulator Kaiso yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 3 6 1 1 1 1 1 1 1 1 1 86.814 84.302 2 0.00092118 97616 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.069 39.67 49559000 17015000 14939000 3192000 0 0 0 0 0 0 4987900 0 0 0 2377000 7048100 16296 3131 14842 136292;136293;136294;136295;136296;136297;136298;136299;136300 108457;108458;108459;108460;108461;108462;108463;108464;108465 108460 9 FIAGTGCLVR Unmodified 1092.575 0.57499942 23 A6NDG6 PGP Phosphoglycolate phosphatase yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 57.621 58.022 2 0.0027812 65221 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 80.165 25.96 17603000 0 0 0 0 0 0 0 0 0 0 0 0 0 6292900 11310000 16297 23 14843 136301;136302 108466;108467 108467 2 FIALANVGNPEK Unmodified 1271.6874 0.68738664 2862 Q69YN2 CWF19L1 CWF19-like protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 68.771 68.826 2 0.00057526 78962 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 77.533 52.611 42616000 0 0 0 2905300 3208800 0 0 0 0 0 6208000 6855900 5144000 5755400 12539000 16298 2862 14844 136303;136304;136305;136306;136307;136308;136309;136310;136311;136312;136313 108468;108469;108470;108471;108472;108473;108474;108475;108476;108477;108478 108473 11 FIALSDK Unmodified 792.43815 0.43815481 3808 Q96EB6 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.83 2.61 1 5 1 1 1 1 1 1 44.622 44.066 2 0.025177 48071 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.297 28.614 64720000 0 5606400 0 0 0 9014000 0 0 0 10847000 0 0 14713000 11437000 13103000 16299 3808 14845 136314;136315;136316;136317;136318;136319 108479;108480 108479 2 FIASTGMDR Unmodified 996.46987 0.46986564 5017 Q9UMS4 PRPF19 Pre-mRNA-processing factor 19 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37.278 36.405 2 0.0051666 39114 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 81.548 33.044 659510000 10513000 150330000 8382900 16979000 28830000 31307000 22982000 36484000 18497000 38582000 45637000 46670000 41301000 53650000 109370000 16300 5017 14846 136320;136321;136322;136323;136324;136325;136326;136327;136328;136329;136330;136331;136332;136333;136334 108481;108482;108483;108484;108485;108486;108487 108485 7 FIASTGMDR Oxidation (M) 1012.4648 0.46478027 5017 Q9UMS4 PRPF19 Pre-mRNA-processing factor 19 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 26.226 22.042 2 0.046009 28768 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 57.047 20.862 102280000 5502300 90559000 6215200 0 0 0 0 0 0 0 0 0 0 0 0 16301 5017 14846 136335;136336;136337 108488 108488 6357 1 FIASTGMDRSLK Oxidation (M) 1340.6758 0.67583567 5017 Q9UMS4 PRPF19 Pre-mRNA-processing factor 19 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 37.537 32.566 3 0.0074598 44983 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.175 38.043 181180000 150420000 23021000 7738800 0 0 0 0 0 0 0 0 0 0 0 0 16302 5017 14847 136338;136339;136340 108489 108489 6357 1 FIASTGMDRSLK Unmodified 1324.6809 0.68092105 5017 Q9UMS4 PRPF19 Pre-mRNA-processing factor 19 yes yes 0 0 1 By MS/MS 2 0 1 1 54.53 46.421 2 0.019396 63656 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.363 38.492 36816000 36816000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16303 5017 14847 136341 108490 108490 0 FIAYQETVEK Unmodified 1226.6183 0.61830402 3100 Q7Z4Q2 HEATR3 HEAT repeat-containing protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 49.323 49.416 2 0.017731 54931 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 48.794 35.34 120240000 0 0 0 6911000 7801600 18147000 10285000 0 0 15413000 10960000 0 12383000 12651000 25687000 16304 3100 14848 136342;136343;136344;136345;136346;136347;136348;136349;136350 108491;108492 108492 2 FIAYQFTDTPLQIK Unmodified 1683.8872 0.88720866 136 O00267 SUPT5H Transcription elongation factor SPT5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 88.007 87.284 2 1.0877E-12 101496 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 130.94 74.211 69345000 11229000 0 1419300 0 2271700 5192500 1487400 2885800 3468500 9744000 6004300 5746300 2334100 4434900 13128000 16305 136 14849 136351;136352;136353;136354;136355;136356;136357;136358;136359;136360;136361;136362;136363 108493;108494;108495;108496;108497;108498;108499;108500;108501;108502;108503;108504;108505;108506 108499 14 FICEQDHQNFLR Unmodified 1605.7358 0.73581017 3633 Q92598 HSPH1 Heat shock protein 105 kDa yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 2 6 1 1 1 1 1 2 1 56.066 53.83 3 0.0040526 58836 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.999 60.942 113270000 41359000 0 5762000 0 0 0 4493400 13365000 0 0 0 0 0 0 48288000 16306 3633 14850 136364;136365;136366;136367;136368;136369;136370;136371 108507;108508;108509;108510;108511;108512;108513 108507 6 FICEQDHQNFLRLLTETEDWLYEEGEDQAK Unmodified 3755.705 0.70497014 3633 Q92598 HSPH1 Heat shock protein 105 kDa yes yes 0 0 1 By MS/MS 2 0 2 2 101.22 93.086 3;4 1.392E-49 119811 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 100.59 95.825 75498000 75498000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16307 3633 14851 136372;136373 108514;108515;108516 108514 3 FICNDDFK Unmodified 1057.4539 0.45388123 2332 Q13620 CUL4B Cullin-4B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 45.021 43.781 2 0.014312 49189 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 70.69 55.908 422580000 17417000 249950000 6901100 13730000 7384700 16525000 0 10765000 10346000 14818000 18820000 0 14643000 14673000 26607000 16308 2332 14852 136374;136375;136376;136377;136378;136379;136380;136381;136382;136383;136384;136385;136386 108517;108518;108519;108520;108521;108522;108523;108524;108525 108518 9 FICTTSAIQNR Unmodified 1309.6449 0.6448699 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 2 2 2 2 2 2 2 1 1 1 45.435 45.565 2;3 7.453E-21 50924 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 168.27 139.87 4449600000 0 0 0 128210000 322620000 213310000 782990000 1002900000 884370000 233340000 289410000 510260000 10572000 19493000 52047000 16309 1714 14853 136387;136388;136389;136390;136391;136392;136393;136394;136395;136396;136397;136398;136399;136400;136401;136402;136403;136404;136405;136406;136407 108526;108527;108528;108529;108530;108531;108532;108533;108534;108535;108536;108537;108538;108539;108540;108541;108542;108543;108544;108545;108546;108547 108531 19 FICTTSAIQNRFK Unmodified 1584.8082 0.80824683 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 59.419 59.57 3 0.0013694 67680 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 47.915 39.53 17294000 0 0 0 0 0 0 4168500 5407600 7718000 0 0 0 0 0 0 16310 1714 14854 136408;136409;136410 108548;108549;108550 108549 3 FIDEETK Unmodified 880.41781 0.4178133 3756 Q96BD8 SKA1 Spindle and kinetochore-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 20.665 20.791 2 0.039143 21116 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 69.176 26.947 67715000 0 0 0 6358000 3833400 7570400 7536300 5460500 0 11847000 11154000 0 0 0 13955000 16311 3756 14855 136411;136412;136413;136414;136415;136416;136417;136418 108551 108551 1 FIDEQNYILR Unmodified 1309.6667 0.6666512 3021 Q6ZW49 PAXIP1 PAX-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 72.026 71.91 2 0.029599 83213 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 53.775 20.882 15035000 0 0 0 0 4147700 6023500 0 0 0 4864200 0 0 0 0 0 16312 3021 14856 136419;136420;136421;136422 108552;108553 108553 2 FIDEQNYILRDAEAEVLFSFSLEESLK Unmodified 3204.5867 0.58667613 3021 Q6ZW49 PAXIP1 PAX-interacting protein 1 yes yes 0 0 1 By MS/MS 3 0 1 1 101.79 98.196 3 5.568E-07 102512 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 55.469 49.174 4617000 4617000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16313 3021 14857 136423 108554;108555 108554 2 FIDGEMIEGK Unmodified 1137.5376 0.53761086 3530 Q8WTS6 SETD7 Histone-lysine N-methyltransferase SETD7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 58.894 57.868 2 0.0023793 73483 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.52 81.548 411810000 8962400 293000000 0 5012100 6051600 5794500 6868200 5862500 7174900 11323000 14680000 0 9756400 9706900 27619000 16314 3530 14858 136424;136425;136426;136427;136428;136429;136430;136431;136432;136433;136434;136435;136436 108556;108557;108558;108559;108560;108561;108562;108563;108564;108565;108566;108567;108568 108559 13 FIDGEMIEGK Oxidation (M) 1153.5325 0.53252548 3530 Q8WTS6 SETD7 Histone-lysine N-methyltransferase SETD7 yes yes 0 1 0 By matching By MS/MS By matching 2 0 3 1 1 1 47.544 41.81 2 0.036628 54898 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 54.191 28.617 98774000 4121200 92734000 1918700 0 0 0 0 0 0 0 0 0 0 0 0 16315 3530 14858 136437;136438;136439 108569 108569 1 FIDNTLYFIAEDDENLESDYFGK Unmodified 2757.2334 0.23337316 2367 Q14116 IL18 Interleukin-18 yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 98.725 90.595 3 1.9202E-102 116798 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 155.76 151.21 159180000 159180000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16316 2367 14859 136440;136441 108570;108571 108571 2 FIDPLAK Unmodified 802.45889 0.45889025 1332 P33991 MCM4 DNA replication licensing factor MCM4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.738 62.833 2 0.023879 71527 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 94.163 19.446 325420000 0 0 0 18149000 13327000 26403000 20895000 16556000 13305000 26684000 40957000 37767000 22172000 27494000 61711000 16317 1332 14860 136442;136443;136444;136445;136446;136447;136448;136449;136450;136451;136452;136453 108572;108573;108574;108575 108573 4 FIDQFVYSTK Unmodified 1246.6234 0.6233894 4259 Q9BZ95 WHSC1L1 Histone-lysine N-methyltransferase NSD3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 72.354 72.242 2 0.020509 83525 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 47.198 22.275 6931300 0 0 0 0 2444100 0 0 4487200 0 0 0 0 0 0 0 16318 4259 14861 136454;136455;136456 108576;108577 108577 2 FIDTTSK Unmodified 810.41233 0.41233399 1402 P39023;Q92901 RPL3;RPL3L 60S ribosomal protein L3;60S ribosomal protein L3-like yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 18.046 17.27 2 0.022033 21362 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.24 73.133 972130000 23239000 374800000 5483400 34057000 35810000 33011000 37155000 33627000 28857000 55361000 61642000 64140000 70453000 63394000 51098000 16319 1402 14862 136457;136458;136459;136460;136461;136462;136463;136464;136465;136466;136467;136468;136469;136470;136471;136472 108578;108579;108580;108581;108582;108583;108584;108585;108586;108587;108588;108589;108590;108591 108581 14 FIDVGGYK Unmodified 897.45962 0.45961853 3955 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.43 3.02 1 2 11 1 2 1 1 1 1 1 1 1 1 1 1 1 53.434 52.459 2 0.0067729 58738 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 97.602 48.29 770800000 751230 125490000 0 0 30905000 43608000 40895000 49355000 44673000 68221000 75973000 73953000 62341000 64363000 90271000 16320 3955 14863 136473;136474;136475;136476;136477;136478;136479;136480;136481;136482;136483;136484;136485;136486 108592;108593;108594;108595;108596;108597;108598;108599;108600;108601;108602;108603;108604 108603 13 FIEAAQR Unmodified 833.43955 0.43955179 4137 Q9BT78 COPS4 COP9 signalosome complex subunit 4 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 21.867 22.094 2 0.023359 22699 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 89.427 52.84 295770000 0 0 0 15770000 14680000 30443000 0 15653000 16642000 34947000 31436000 32932000 24275000 31702000 47287000 16321 4137 14864 136487;136488;136489;136490;136491;136492;136493;136494;136495;136496;136497 108605 108605 1 FIEAAQRYNELSYK Unmodified 1730.8628 0.86278482 4137 Q9BT78 COPS4 COP9 signalosome complex subunit 4 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 65.585 59.559 3 0.0012035 79562 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.265 35.197 276680000 268410000 0 8266900 0 0 0 0 0 0 0 0 0 0 0 0 16322 4137 14865 136498;136499 108606;108607;108608 108606 3 FIEDELQIPVK Unmodified 1329.718 0.71801807 1283 P30520 ADSS Adenylosuccinate synthetase isozyme 2 yes yes 0 0 0 By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 14 1 1 1 1 1 2 1 1 2 1 1 1 80.749 80.824 2 0.0048325 93763 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 95.608 67.866 140940000 0 0 0 2365200 2659200 5802900 4551800 4523200 5688700 4773400 15980000 16018000 5665500 15182000 57731000 16323 1283 14866 136500;136501;136502;136503;136504;136505;136506;136507;136508;136509;136510;136511;136512;136513 108609;108610;108611;108612;108613;108614 108614 1 FIEDRITEESK Unmodified 1365.6776 0.67760981 2465 Q14CX7 NAA25 N-alpha-acetyltransferase 25, NatB auxiliary subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 2 16 1 1 1 2 2 2 2 2 2 1 1 1 40.247 39.896 2;3 3.5597E-58 44267 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 192.38 156 2680300000 13648000 0 79598000 0 0 6355200 755000000 738760000 904630000 50402000 40431000 75588000 4472100 4965400 6491900 16324 2465 14867 136514;136515;136516;136517;136518;136519;136520;136521;136522;136523;136524;136525;136526;136527;136528;136529;136530;136531 108615;108616;108617;108618;108619;108620;108621;108622;108623;108624;108625;108626 108623 9 FIEECSFVSDK Unmodified 1359.6017 0.60166768 2830;3089 Q5VZ89;Q7Z401 DENND4C;DENND4A DENN domain-containing protein 4C;C-myc promoter-binding protein no no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.808 59.916 2 0.0022576 67350 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 82.287 74.067 86595000 0 0 0 3610700 6087500 5491500 6076400 8823500 6252300 6928500 8023200 10834000 8856100 7240100 8370600 16325 2830;3089 14868 136532;136533;136534;136535;136536;136537;136538;136539;136540;136541;136542;136543 108627;108628;108629;108630;108631 108630 5 FIEEHATK Unmodified 973.4869 0.48689592 982 P13667 PDIA4 Protein disulfide-isomerase A4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 2 1 6 2 1 1 1 1 1 1 1 14.753 13.772 2 0.0067281 16944 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 130.22 87.746 1330800000 0 479920000 590920000 0 0 0 0 23723000 0 0 55498000 0 38174000 35533000 107020000 16326 982 14869 136544;136545;136546;136547;136548;136549;136550;136551;136552 108632;108633;108634;108635;108636;108637;108638;108639;108640;108641;108642;108643;108644 108642 13 FIEFEDSQEQEK Unmodified 1527.6729 0.67291837 391 O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.18 3.29 3 1 13 1 2 1 1 1 1 1 1 3 1 1 1 1 1 55.654 54.284 2 8.3081E-07 61270 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 116.52 97.275 323360000 12586000 251810000 2346200 0 2977400 4007300 5675600 3745700 4074500 7846300 6302200 6923600 0 5348200 9716900 16327 391 14870 136553;136554;136555;136556;136557;136558;136559;136560;136561;136562;136563;136564;136565;136566;136567;136568;136569 108645;108646;108647;108648;108649;108650;108651;108652;108653;108654;108655;108656 108655 11 FIEIAAR Unmodified 818.46504 0.46503826 2046 Q00839 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 50.626 50.78 2 0.020823 57376 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 107.74 51.234 6183100000 0 0 0 376750000 398870000 480770000 417080000 348380000 418010000 582180000 592410000 747440000 664150000 495770000 661300000 16328 2046 14871 136570;136571;136572;136573;136574;136575;136576;136577;136578;136579;136580;136581 108657;108658;108659;108660;108661;108662;108663;108664;108665;108666;108667;108668;108669;108670;108671;108672;108673;108674;108675;108676;108677;108678 108658 22 FIEIAARK Unmodified 946.56 0.56000128 2046 Q00839 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.732 37.913 2 0.034231 42255 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 107.66 68.116 610410000 0 0 0 30181000 27639000 50245000 39939000 23629000 66570000 50850000 50987000 104420000 63701000 33591000 68663000 16329 2046 14872 136582;136583;136584;136585;136586;136587;136588;136589;136590;136591;136592;136593 108679;108680;108681 108679 0 FIELEQEK Unmodified 1034.5284 0.52842638 4077 Q99996 AKAP9 A-kinase anchor protein 9 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 47.634 48.365 2 0.025333 53460 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.782 33.963 8423200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8423200 16330 4077 14873 136594;136595 108682;108683 108682 2 FIENANK Unmodified 834.42357 0.42356738 2649 Q2KHR3 QSER1 Glutamine and serine-rich protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching 10 0 4 1 1 1 1 14.112 14.38 2 0.044016 14014 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.993 6.6349 16544000 0 0 0 0 0 3485900 0 0 0 0 0 3572300 0 4756600 4728800 16331 2649 14874 136596;136597;136598;136599 108684 108684 1 FIFIDPK Unmodified 878.49019 0.49019038 36 A8K2U0 A2ML1 Alpha-2-macroglobulin-like protein 1 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 76.075 76.141 2 0.035265 88460 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 70.912 53.064 54996000 0 0 0 28137000 0 2258500 3000700 6545100 0 3551700 4000800 3536600 1864600 2100600 0 16332 36 14875 136600;136601;136602;136603;136604;136605;136606;136607;136608 108685 108685 1 FIFNGEFK Unmodified 1000.5018 0.5018177 2331 Q13619 CUL4A Cullin-4A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 76.006 75.896 2 0.0087129 86888 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.265 66.46 228020000 0 0 34839000 0 5804900 25992000 11132000 13716000 13716000 16966000 16179000 19944000 14715000 13999000 41021000 16333 2331 14876 136609;136610;136611;136612;136613;136614;136615;136616;136617;136618;136619;136620 108686;108687;108688;108689;108690;108691;108692;108693;108694;108695;108696 108688 11 FIFVGTLK Unmodified 923.54804 0.54803961 2879 Q6GQQ9 OTUD7B OTU domain-containing protein 7B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 79.7 79.764 2 0.019504 92251 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 63.565 17.214 26543000 0 0 0 1210900 0 3284100 1892300 2746100 2737100 3799500 0 0 2883700 0 7989500 16334 2879 14877 136621;136622;136623;136624;136625;136626;136627;136628 108697;108698;108699;108700 108697 4 FIGATANFSR Unmodified 1082.5509 0.55089316 3505 Q8TDP1 RNASEH2C Ribonuclease H2 subunit C yes yes 0 0 0 By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 52.638 52.78 2 0.0093306 59622 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 57.96 19.168 63299000 0 0 0 2931300 944950 6180600 2563200 2568800 0 3647300 8253700 9559800 7300000 3291400 16058000 16335 3505 14878 136629;136630;136631;136632;136633;136634;136635;136636;136637;136638;136639 108701;108702;108703 108702 3 FIGELFK Unmodified 852.47454 0.47454032 2102;329 Q04637;O43432 EIF4G1;EIF4G3 Eukaryotic translation initiation factor 4 gamma 1;Eukaryotic translation initiation factor 4 gamma 3 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 6 12 2 2 2 1 1 1 1 1 1 1 1 1 1 1 1 76.558 75.752 2 0.023406 86462 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 86.866 7.4126 2610300000 512990000 123830000 99033000 80130000 83271000 164770000 142470000 148500000 119210000 149300000 156360000 226730000 161060000 197500000 245100000 16336 2102;329 14879 136640;136641;136642;136643;136644;136645;136646;136647;136648;136649;136650;136651;136652;136653;136654;136655;136656;136657 108704;108705;108706;108707;108708;108709;108710;108711 108710 8 FIGELGK Unmodified 762.42759 0.42759012 1974 P78344 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 7.18 3.74 3 1 7 1 2 1 1 1 1 1 1 1 1 45.34 43.354 2 0.023354 48298 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 89.673 30.033 883370000 23666000 133530000 50959000 70864000 86778000 137260000 106040000 0 0 119640000 150690000 0 0 0 3938500 16337 1974 14880 136658;136659;136660;136661;136662;136663;136664;136665;136666;136667;136668 108712;108713;108714;108715;108716;108717 108716 6 FIGPLPR Unmodified 798.47521 0.47520902 3903 Q96K76 USP47 Ubiquitin carboxyl-terminal hydrolase 47 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 56.795 56.994 2 0.026956 64971 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 77.944 28.632 21093000 0 0 0 0 0 5898500 0 0 0 5270900 5511700 0 0 4411800 0 16338 3903 14881 136669;136670;136671;136672 108718;108719 108718 2 FIGPSPEVVRK Unmodified 1227.6976 0.69755739 951 P11498 PC Pyruvate carboxylase, mitochondrial yes yes 0 0 1 By matching By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 46.438 46.94 3 0.019778 52028 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 32.254 20.523 24317000 0 0 0 0 0 0 0 0 0 0 4740300 4567500 3447300 3961600 7600000 16339 951 14882 136673;136674;136675;136676;136677 108720;108721 108721 2 FIGSPPGYVGHEEGGQLTK Unmodified 1971.969 0.96904081 4315 Q9H078 CLPB Caseinolytic peptidase B protein homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 2 1 1 1 1 64.024 58.416 3 8.8526E-05 72703 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 75.564 75.564 69155000 45807000 4789900 18558000 0 0 0 0 0 0 0 0 0 0 0 0 16340 4315 14883 136678;136679;136680 108722;108723;108724 108724 1 FIHQQPQSSSPVYGSSAK Unmodified 1946.9486 0.94863972 1558 P49023 PXN Paxillin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 34.815 35.019 3 2.2912E-05 37677 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 66.893 62.088 239730000 0 0 0 9817900 5268300 0 9693100 11353000 0 22417000 33014000 35576000 26687000 31282000 54617000 16341 1558 14884 136681;136682;136683;136684;136685;136686;136687;136688;136689;136690 108725;108726;108727;108728;108729;108730 108727 6 FIHSCAK Unmodified 861.41671 0.41670786 3814 Q96EK6 GNPNAT1 Glucosamine 6-phosphate N-acetyltransferase yes yes 0 0 0 By MS/MS By matching By MS/MS 2 0 3 1 1 1 10.362 7.237 2 0.022033 11862 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 108.24 51.728 460850000 419580000 21467000 19802000 0 0 0 0 0 0 0 0 0 0 0 0 16342 3814 14885 136691;136692;136693 108731;108732 108731 2 FIIDNTK Unmodified 849.45962 0.45961853 5085 Q9Y263 PLAA Phospholipase A-2-activating protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.6 3.2 4 1 1 2 1 1 44.726 40.38 1;2 0.012128 55283 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 124.89 14.276 486760000 37591000 403530000 20659000 0 0 0 0 0 0 24979000 0 0 0 0 0 16343 5085 14886 136694;136695;136696;136697;136698 108733;108734;108735;108736;108737 108737 4 FIIGSVSEDNSEDEISNLVK Unmodified 2194.0641 0.064122984 2231 Q13085 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes yes 0 0 0 By MS/MS 3 0 1 1 89.603 86.393 2 3.3492E-08 103499 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 61.375 53.199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16344 2231 14887 136699 108738 108738 1 FIIPGLK Unmodified 786.50036 0.50036114 774 P04114 APOB Apolipoprotein B-100;Apolipoprotein B-48 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.564 80.625 2 0.04788 92751 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.263 18.218 93023000 0 0 0 4539900 5907000 8324900 6369100 8230200 5889600 9786100 9598900 11434000 6308200 6746700 9888400 16345 774 14888 136700;136701;136702;136703;136704;136705;136706;136707;136708;136709;136710;136711 108739 108739 1 FIIPNVVK Unmodified 928.57459 0.57458871 719 P00338 LDHA L-lactate dehydrogenase A chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 4 2 12 3 2 1 1 1 1 1 1 1 1 1 1 1 1 1 80.476 78.823 2 0.0099045 90835 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 81.381 29.809 22659000000 9862500000 6076000000 2633100000 109250000 52425000 53213000 61139000 78582000 56691000 91157000 685400000 370840000 67736000 493990000 1967200000 16346 719 14889 136712;136713;136714;136715;136716;136717;136718;136719;136720;136721;136722;136723;136724;136725;136726;136727;136728;136729 108740;108741;108742;108743;108744;108745;108746;108747;108748;108749;108750;108751;108752;108753;108754;108755;108756;108757;108758;108759;108760;108761;108762;108763 108741 24 FIIPQIVK Unmodified 956.60589 0.60588884 836 P07195 LDHB L-lactate dehydrogenase B chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 84.463 83.344 2 0.0068464 96405 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 94.163 78.116 8177000000 2354400000 1761300000 406970000 15414000 23225000 45794000 30585000 38671000 25752000 67178000 502860000 350130000 47463000 390090000 2117200000 16347 836 14890 136730;136731;136732;136733;136734;136735;136736;136737;136738;136739;136740;136741;136742;136743;136744;136745 108764;108765;108766;108767;108768;108769;108770;108771;108772;108773;108774;108775;108776 108773 12 FIIPSPK Unmodified 800.47963 0.47962569 774 P04114 APOB Apolipoprotein B-100;Apolipoprotein B-48 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 63.869 63.974 2 0.026498 72823 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 78.616 51.495 43576000 0 0 0 3735200 0 4273500 3595700 4581800 3542900 4340700 5151200 4610600 5285800 4458600 0 16348 774 14891 136746;136747;136748;136749;136750;136751;136752;136753;136754;136755 108777;108778;108779;108780;108781 108781 5 FIIQSEKPPHYLESR Unmodified 1842.9628 0.96283322 1006 P14735 IDE Insulin-degrading enzyme yes yes 0 0 1 By MS/MS 10 0 1 1 59.161 59.755 3 0.01627 67372 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 31.42 21.321 4308400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4308400 16349 1006 14892 136756 108782 108782 1 FILAPAK Unmodified 758.46906 0.46906101 983 P13674 P4HA1 Prolyl 4-hydroxylase subunit alpha-1 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 52.361 52.241 2 0.033387 57720 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.021 50.474 117860000 0 0 26221000 0 4079800 6523500 3812500 4515600 3311200 8776800 12616000 12362000 8156000 7143800 20344000 16350 983 14893 136757;136758;136759;136760;136761;136762;136763;136764;136765;136766;136767;136768 108783;108784;108785;108786;108787;108788;108789 108784 7 FILDAPDLGQLMK Oxidation (M) 1475.7694 0.76940171 3232 Q8IVV2 LOXHD1 Lipoxygenase homology domain-containing protein 1 yes yes 0 1 0 By MS/MS 10 0 1 1 52.803 52.966 2 0.0089932 59731 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 56.916 23.538 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16351 3232 14894 136769 108790 108790 4848 1 FILEQQEREK Unmodified 1318.6881 0.68811492 478 O75330 HMMR Hyaluronan mediated motility receptor yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37.578 37.108 3 0.0017924 40972 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 81.338 63.529 95714000 0 6573700 3087100 4445300 5528900 7407800 5406300 6711000 4767500 7965000 5345500 10865000 8148000 7667800 11795000 16352 478 14895 136770;136771;136772;136773;136774;136775;136776;136777;136778;136779;136780;136781;136782;136783 108791;108792;108793;108794;108795;108796;108797;108798;108799;108800;108801;108802 108795 11 FILIQNR Unmodified 902.53379 0.53378653 1725 P53680 AP2S1 AP-2 complex subunit sigma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.878 59.986 2 0.023328 69353 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 91.093 56.016 236400000 0 0 0 13183000 12565000 24864000 25368000 15807000 12868000 17235000 23058000 30088000 20044000 16480000 24841000 16353 1725 14896 136784;136785;136786;136787;136788;136789;136790;136791;136792;136793;136794;136795 108803 108803 1 FILPNVSTPVSDAFK Unmodified 1633.8716 0.87155859 4814 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 91.02 89.927 2 0.00031104 104274 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 67.153 47.882 92829000 13249000 13254000 0 0 2415800 3190700 2146300 5233300 3867200 11521000 7762600 7376300 2356500 4857700 15600000 16354 4814 14897 136796;136797;136798;136799;136800;136801;136802;136803;136804;136805;136806;136807;136808;136809 108804;108805;108806;108807;108808;108809;108810;108811;108812;108813;108814;108815;108816 108806 13 FILPVNEGK Unmodified 1015.5702 0.57023162 5146 Q9Y3A5 SBDS Ribosome maturation protein SBDS yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 69.005 69.082 2 0.011616 79413 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 62.546 49.549 138840000 0 0 0 4547400 0 25112000 18354000 0 10487000 18026000 22904000 0 0 0 39404000 16355 5146 14898 136810;136811;136812;136813;136814;136815;136816 108817;108818 108817 2 FILPVNEGKK Unmodified 1143.6652 0.66519463 5146 Q9Y3A5 SBDS Ribosome maturation protein SBDS yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.703 55.832 3 0.0053576 64762 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 43.77 19.74 44865000 0 0 0 2643600 2816300 3996400 3901000 2749400 1459000 3552000 4420800 5575600 2788500 2024000 8938300 16356 5146 14899 136817;136818;136819;136820;136821;136822;136823;136824;136825;136826;136827;136828 108819;108820;108821;108822;108823;108824;108825;108826 108825 8 FILSCADDK Unmodified 1067.4957 0.49574604 1471 P43034 PAFAH1B1 Platelet-activating factor acetylhydrolase IB subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 55.218 49.249 2 0.0012532 64023 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.54 109.4 578280000 28952000 538850000 10476000 0 0 0 0 0 0 0 0 0 0 0 0 16357 1471 14900 136829;136830;136831 108827;108828;108829 108827 3 FILSIAYSPDGK Unmodified 1309.6918 0.69180331 4304 Q9GZS3 WDR61 WD repeat-containing protein 61;WD repeat-containing protein 61, N-terminally processed yes yes 0 0 0 By MS/MS 2 0 1 1 88.653 80.523 2 5.0122E-13 104763 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 130.66 84.976 14481000 14481000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16358 4304 14901 136832 108830 108830 1 FILTADRDEK Unmodified 1206.6245 0.62445203 1791 P57081 WDR4 tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4 yes yes 0 0 1 By matching By MS/MS By matching By matching By MS/MS 10 0 5 1 1 1 1 1 40.524 40.898 3 0.022975 45396 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 33.89 19.896 27125000 0 0 0 0 0 3546100 0 0 0 0 5911800 0 3376100 5015100 9276300 16359 1791 14902 136833;136834;136835;136836;136837 108831 108831 1 FIMESGAK Oxidation (M) 897.4266 0.42660385 1156 P23396 RPS3 40S ribosomal protein S3 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 2 1 1 2 1 2 1 2 1 2 1 16.735 16.943 2 0.0097114 16535 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 69.998 12.535 209730000 0 0 0 13697000 0 9129100 6729000 15599000 4295800 24906000 15045000 42203000 21990000 34639000 21495000 16360 1156 14903 136838;136839;136840;136841;136842;136843;136844;136845;136846;136847;136848;136849;136850;136851;136852;136853 108832;108833;108834;108835;108836;108837;108838;108839;108840;108841;108842;108843 108833 1670 4 FINDQYEK Unmodified 1055.4924 0.49237523 4898 Q9UHD8 SEPT9 Septin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 31.022 31.147 2 0.0087714 33654 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 85.064 56.957 136330000 0 0 0 9750300 9266500 13296000 10769000 10481000 12021000 14449000 23935000 20356000 12008000 0 0 16361 4898 14904 136854;136855;136856;136857;136858;136859;136860;136861;136862;136863 108844;108845;108846;108847;108848;108849;108850;108851;108852;108853;108854 108848 11 FINLFPETK Unmodified 1107.5964 0.59644637 689 O95782 AP2A1 AP-2 complex subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.726 81.731 2 0.0044372 94497 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 86.833 53.282 75190000 0 0 0 4758600 5112700 11209000 6641800 11914000 0 14373000 0 11671000 9509400 0 0 16362 689 14905 136864;136865;136866;136867;136868;136869;136870;136871;136872;136873;136874;136875 108855;108856;108857;108858;108859;108860;108861;108862;108863;108864;108865;108866;108867;108868 108855 14 FINMNGLMEDPMK Unmodified 1538.6931 0.693142 488 O75376 NCOR1 Nuclear receptor corepressor 1 yes yes 0 0 0 By MS/MS 2 0 1 1 89.055 84.182 2 0.0049359 104623 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.08 42.698 23282000 0 23282000 0 0 0 0 0 0 0 0 0 0 0 0 0 16363 488 14906 136876 108869 108869 1 FINNNAVTK Unmodified 1019.54 0.53999412 2328 Q13616 CUL1 Cullin-1 yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 25.391 25.636 2 0.0032866 27131 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 93.267 45.152 159880000 0 0 0 0 6501500 16281000 15984000 0 2031000 19266000 21164000 20686000 15032000 12522000 30413000 16364 2328 14907 136877;136878;136879;136880;136881;136882;136883;136884;136885;136886 108870;108871;108872;108873 108872 4 FINQLLGVVPLSTPTEDK Unmodified 1970.0724 0.072443247 2465 Q14CX7 NAA25 N-alpha-acetyltransferase 25, NatB auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 2 2 2 1 1 1 92.7 92.872 2;3 0.00036445 107547 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 72.958 67.352 70224000 0 0 0 0 0 0 8998500 32724000 23058000 2765200 1449200 0 0 0 1228100 16365 2465 14908 136887;136888;136889;136890;136891;136892;136893;136894;136895 108874;108875;108876;108877;108878;108879 108875 4 FINVGEK Unmodified 805.4334 0.43340378 535 O75717 WDHD1 WD repeat and HMG-box DNA-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 34.988 33.643 2 0.027336 41637 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 97.602 43.065 206890000 11927000 17543000 11552000 18703000 14495000 15163000 14896000 13008000 8753100 19814000 24380000 0 19989000 16662000 0 16366 535 14909 136896;136897;136898;136899;136900;136901;136902;136903;136904;136905;136906;136907;136908;136909 108880;108881;108882;108883 108881 4 FIPAPPSSPLR Unmodified 1180.6604 0.66044361 4467 Q9H9A5 CNOT10 CCR4-NOT transcription complex subunit 10 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.718 69.794 2 0.018088 80083 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.654 28.097 107160000 0 0 0 7569500 6314300 5829800 9052500 8721000 5090200 9439800 11858000 14531000 9916100 8159700 10679000 16367 4467 14910 136910;136911;136912;136913;136914;136915;136916;136917;136918;136919;136920;136921 108884;108885 108885 1 FIPAPPSSPLRK Unmodified 1308.7554 0.75540662 4467 Q9H9A5 CNOT10 CCR4-NOT transcription complex subunit 10 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 57.004 57.282 3 0.038699 64344 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 20.463 3.437 74202000 0 0 0 0 0 10864000 6874000 9048500 6158600 7908300 9895800 9874900 0 0 13577000 16368 4467 14911 136922;136923;136924;136925;136926;136927;136928;136929 108886 108886 1 FIPEGSQR Unmodified 932.47158 0.4715802 770 P04062 GBA Glucosylceramidase yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 23.017 22.967 2 0.036768 24343 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 94.407 39.882 40292000 0 0 0 25716000 5982400 0 0 0 0 0 0 0 0 8593200 0 16369 770 14912 136930;136931;136932 108887 108887 0 FIPFIGVVK Unmodified 1018.6215 0.62153891 2988 Q6VY07 PACS1 Phosphofurin acidic cluster sorting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 89.194 88.634 2 0.011503 102563 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.717 54.486 80847000 9577300 0 0 2487600 3156500 9514800 4581800 5322200 5891500 8775900 4960300 6791400 3157700 4409400 12220000 16370 2988 14913 136933;136934;136935;136936;136937;136938;136939;136940;136941;136942;136943;136944;136945 108888;108889;108890;108891;108892;108893;108894;108895 108890 8 FIPGPPGNK Unmodified 925.50215 0.50215205 28 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 42.92 37.693 2 0.033288 51207 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.757 19.307 307630000 145000000 150660000 11974000 0 0 0 0 0 0 0 0 0 0 0 0 16371 28 14914 136946;136947;136948 108896;108897 108897 2 FIPHENGVHTIDVK Unmodified 1604.8311 0.83109076 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching 10 0 5 1 1 1 1 1 46.077 46.509 4 0.041655 52235 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 18.413 6.8303 103330000 0 0 0 0 0 13665000 0 0 0 12617000 15101000 25336000 0 0 36613000 16372 487 14915 136949;136950;136951;136952;136953 108898 108898 1 FIPLARPEVK Unmodified 1168.6968 0.69682911 5180 Q9Y3Z3 SAMHD1 Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 56.659 56.924 3 0.020373 64047 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 34.755 22.139 38123000 0 0 0 0 0 7575000 4289500 0 0 0 5063800 0 7518800 6281200 7394400 16373 5180 14916 136954;136955;136956;136957;136958;136959 108899 108899 1 FIPLSEPAPVPPIPNEQQLAR Unmodified 2312.2529 0.25286723 4040 Q99627 COPS8 COP9 signalosome complex subunit 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.36 2.17 2 23 2 1 2 2 2 2 2 2 2 2 2 2 2 89.038 88.727 2;3 2.6418E-08 109828 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.614 70.564 438030000 0 149090000 0 1911600 11311000 22398000 9696900 17345000 13782000 45031000 29599000 36812000 11547000 20382000 69124000 16374 4040 14917 136960;136961;136962;136963;136964;136965;136966;136967;136968;136969;136970;136971;136972;136973;136974;136975;136976;136977;136978;136979;136980;136981;136982;136983;136984 108900;108901;108902;108903;108904;108905;108906;108907;108908;108909;108910;108911;108912;108913;108914;108915 108905 16 FIPNILPPAVESELSEYAAQDQK Unmodified 2558.2904 0.29043453 3203 Q86Y37 CACUL1 CDK2-associated and cullin domain-containing protein 1 yes yes 0 0 0 By MS/MS 3 0 1 1 98.812 95.461 3 0.0052284 114546 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 16.324 13.756 1318400 0 1318400 0 0 0 0 0 0 0 0 0 0 0 0 0 16375 3203 14918 136985 108916 108916 1 FIPRENGVYLIDVK Unmodified 1661.9141 0.91409211 1124 P21333 FLNA Filamin-A yes yes 0 0 1 By MS/MS 10 0 1 1 75.914 76.2 3 0.044731 87466 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 27.767 16.822 12016000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12016000 16376 1124 14919 136986 108917 108917 1 FIPYTEEFSEK Unmodified 1388.65 0.64999808 5301 Q9Y6Y8 SEC23IP SEC23-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.251 72.321 2 0.00029633 83288 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 90.15 65.375 451740000 0 0 0 19942000 22979000 26289000 28318000 54558000 24335000 46505000 33325000 52682000 32678000 38175000 71951000 16377 5301 14920 136987;136988;136989;136990;136991;136992;136993;136994;136995;136996;136997;136998 108918;108919;108920;108921;108922;108923;108924;108925;108926;108927;108928;108929;108930 108919 13 FIQDPEK Unmodified 875.43888 0.43888309 3247 Q8IWV8 UBR2 E3 ubiquitin-protein ligase UBR2 yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 28.37 23.458 2 0.029674 30823 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.407 55.616 95300000 4629700 90670000 0 0 0 0 0 0 0 0 0 0 0 0 0 16378 3247 14921 136999;137000 108931 108931 1 FIQENIFGICPHMTEDNK Oxidation (M) 2207.998 0.99797445 1270 P30101 PDIA3 Protein disulfide-isomerase A3 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 6 4 3 3 2 1 1 1 1 80.641 77.167 2;3 1.1395E-10 99035 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 106.17 99.27 462630000 280380000 129540000 0 0 2774500 0 0 3430100 0 0 0 0 0 0 46515000 16379 1270 14922 137001;137002;137003;137004;137005;137006 108932;108933;108934;108935;108936 108936 1872 5 FIQENIFGICPHMTEDNK Unmodified 2192.0031 0.0030598275 1270 P30101 PDIA3 Protein disulfide-isomerase A3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.8 3.12 3 1 1 1 2 1 1 85.539 81.854 3 4.5148E-14 103834 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 111.01 103.36 666580000 244700000 383880000 20540000 0 0 0 0 0 0 0 0 0 0 0 17454000 16380 1270 14922 137007;137008;137009;137010;137011 108937;108938;108939;108940;108941;108942;108943;108944 108941 7 FIQLLSDQSDQSVLIQK Unmodified 1961.047 0.046956778 649 O95373 IPO7 Importin-7 yes yes 0 0 0 By MS/MS 10 0 1 1 84.472 84.651 3 0.011123 97750 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 16.184 2.5285 7265600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7265600 16381 649 14923 137012 108945 108945 1 FIQMGSEK Unmodified 938.45315 0.45315295 3511 Q8TE04 PANK1 Pantothenate kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 33.361 33.446 2 0.015996 37082 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 67.981 29.61 75213000 0 0 0 10079000 13815000 12549000 0 0 0 8261300 13087000 17422000 0 0 0 16382 3511 14924 137013;137014;137015;137016;137017;137018 108946;108947;108948;108949;108950 108949 5 FIQMGSEK Oxidation (M) 954.44807 0.44806757 3511 Q8TE04 PANK1 Pantothenate kinase 1 yes yes 0 1 0 By MS/MS 10 0 1 1 13.926 13.791 2 0.027854 13170 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 96.492 55.189 7213700 0 0 0 7213700 0 0 0 0 0 0 0 0 0 0 0 16383 3511 14924 137019 108951 108951 0 FIQPNIGELPTALK Unmodified 1539.8661 0.86607929 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 86.221 85.571 2 0.00035143 99048 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 94.616 94.616 435480000 0 131670000 1920800 6101700 16990000 21926000 15296000 24735000 18515000 42063000 30295000 38829000 20223000 23926000 42990000 16384 2361 14925 137020;137021;137022;137023;137024;137025;137026;137027;137028;137029;137030;137031;137032;137033;137034 108952;108953;108954;108955;108956;108957;108958;108959;108960;108961;108962;108963;108964;108965;108966 108952 14 FIQQTYPSGGEEQAQYCR Unmodified 2160.9535 0.9534671 3549 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein yes yes 0 0 0 By MS/MS 2 0 1 1 54.608 48.802 2 4.2783E-14 63126 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 111.79 104.59 11150000 0 11150000 0 0 0 0 0 0 0 0 0 0 0 0 0 16385 3549 14926 137035 108967;108968 108967 2 FIQQTYPSGGEEQAQYCRAAEELSK Unmodified 2889.3239 0.32393627 3549 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 74.834 69.91 3 2.2624E-30 88384 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.92 94.195 152370000 10678000 88553000 53143000 0 0 0 0 0 0 0 0 0 0 0 0 16386 3549 14927 137036;137037;137038;137039 108969;108970;108971;108972;108973;108974 108969 6 FIQSEMSEAVER Unmodified 1424.6606 0.66057954 2736 Q5JSZ5 PRRC2B Protein PRRC2B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.694 55.82 2 2.4838E-05 64308 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 109.42 66.173 54457000 0 0 0 4172400 2955400 3399000 4193700 4425900 3641800 6285600 6622500 5785800 4093700 3684300 5197400 16387 2736 14928 137040;137041;137042;137043;137044;137045;137046;137047;137048;137049;137050;137051 108975;108976;108977;108978;108979;108980;108981;108982;108983;108984;108985 108984 11 FIQSEMSEAVER Oxidation (M) 1440.6555 0.65549416 2736 Q5JSZ5 PRRC2B Protein PRRC2B yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 35.037 34.963 2 3.6517E-05 38405 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 90.108 53.713 14410000 0 0 0 2182100 1973900 0 4538400 2468400 0 0 0 0 0 3246900 0 16388 2736 14928 137052;137053;137054;137055;137056 108986;108987;108988;108989 108986 4380 4 FIQSIPDNQLVR Unmodified 1428.7725 0.77251325 4433 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 72.24 72.307 2 0.00069544 83330 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 84.213 47.021 19956000 0 0 0 0 1933900 3881700 2078900 0 1824800 4067500 0 0 0 0 6169100 16389 4433 14929 137057;137058;137059;137060;137061;137062 108990;108991;108992 108990 3 FIQTFGK Unmodified 839.45414 0.45413923 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 2 1 1 1 1 1 1 1 1 1 1 1 1 44.918 43.38 2 0.023412 48643 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 86.512 68.951 3668800000 1665400000 693570000 303780000 71892000 70042000 95808000 0 81786000 81023000 99525000 121110000 153690000 105440000 125720000 0 16390 1986 14930 137063;137064;137065;137066;137067;137068;137069;137070;137071;137072;137073;137074;137075;137076 108993;108994;108995;108996;108997;108998;108999;109000;109001;109002;109003;109004;109005;109006;109007;109008;109009 109003 17 FIQTTASTRPSVSAPTVR Unmodified 1918.0272 0.027224389 17 A3KN83 SBNO1 Protein strawberry notch homolog 1 yes yes 0 0 1 By MS/MS 10 0 1 1 53.081 53.157 3 0.0020589 60191 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 39.338 29.55 4806600 0 0 0 0 0 0 4806600 0 0 0 0 0 0 0 0 16391 17 14931 137077 109010 109010 1 FIQVHPITK Unmodified 1081.6284 0.6284152 4639 Q9NTZ6 RBM12 RNA-binding protein 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 46.541 47.013 2 0.0051384 51408 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.426 45.332 44480000 0 0 0 0 0 0 0 0 0 0 6329600 0 0 9865700 28284000 16392 4639 14932 137078;137079;137080 109011;109012;109013 109011 1 FIQYLASR Unmodified 996.53927 0.53926584 2300 Q13492 PICALM Phosphatidylinositol-binding clathrin assembly protein no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.825 57.089 2 0.0047287 65141 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 113.5 54.518 129570000 0 0 0 0 0 7822600 15819000 15054000 7755300 10763000 15062000 12021000 9389700 14251000 21634000 16393 2300 14933 137081;137082;137083;137084;137085;137086;137087;137088;137089;137090;137091;137092 109014;109015;109016;109017;109018;109019;109020;109021;109022;109023;109024;109025;109026;109027 109017 14 FIRQFVPIK Unmodified 1146.6913 0.6913498 2641 Q16881 TXNRD1 Thioredoxin reductase 1, cytoplasmic yes yes 0 0 1 By MS/MS 2 0 1 1 77.07 68.939 3 0.0085013 90831 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.516 38.449 11430000 11430000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16394 2641 14934 137093 109028;109029 109028 2 FISADQSVALGELVK Unmodified 1575.8508 0.85082315 315 O43301 HSPA12A Heat shock 70 kDa protein 12A yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 86.636 83.137 2 1.9196E-23 103394 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.12 113.5 102080000 0 98477000 3604400 0 0 0 0 0 0 0 0 0 0 0 0 16395 315 14935 137094;137095;137096 109030;109031;109032 109030 3 FISATDTIRK Unmodified 1150.6346 0.63462279 4924 Q9UID3 VPS51 Vacuolar protein sorting-associated protein 51 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38.214 37.317 3 0.0045047 52154 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.533 56.495 219790000 87389000 9780000 2497500 6540500 8209800 10732000 8021900 8125400 5821900 12020000 9137500 15659000 12082000 8633900 15144000 16396 4924 14936 137097;137098;137099;137100;137101;137102;137103;137104;137105;137106;137107;137108;137109;137110;137111 109033;109034;109035;109036;109037;109038;109039;109040;109041 109037 7 FISDIANDALQHCK Unmodified 1630.7773 0.77734063 2214 Q12962 TAF10 Transcription initiation factor TFIID subunit 10 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 74.093 68.485 3 7.2169E-05 89353 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 100.38 88.461 31805000 20332000 0 11473000 0 0 0 0 0 0 0 0 0 0 0 0 16397 2214 14937 137112;137113 109042;109043;109044 109042 3 FISLASLEYSDYSK Unmodified 1621.7876 0.78755419 2395 Q14232 EIF2B1 Translation initiation factor eIF-2B subunit alpha yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 85.147 85.289 2 0.0063062 98571 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.205 42.396 32840000 0 0 0 0 0 0 0 3056600 0 4318300 4463500 4721700 2889100 2601400 10789000 16398 2395 14938 137114;137115;137116;137117;137118;137119;137120 109045 109045 1 FITDNTVEER Unmodified 1222.583 0.58298115 389 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 41.237 41.373 2 0.0028772 45669 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 92.838 54.678 118620000 0 0 0 11945000 0 17623000 13147000 16344000 0 20402000 0 27128000 0 12035000 0 16399 389 14939 137121;137122;137123;137124;137125;137126;137127 109046;109047;109048;109049;109050;109051;109052;109053 109052 7 FITEIWHPNVDK Unmodified 1497.7616 0.76161421 1880 P62253 UBE2G1 Ubiquitin-conjugating enzyme E2 G1;Ubiquitin-conjugating enzyme E2 G1, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching 7.12 3.72 2 1 5 2 1 1 1 1 1 1 77.836 75.842 3 0.001096 97727 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.17 70.975 93218000 54072000 13347000 0 0 0 9272000 2542200 3938100 0 4968100 5078200 0 0 0 0 16400 1880 14940 137128;137129;137130;137131;137132;137133;137134;137135 109054;109055;109056 109056 3 FITHAPPGEFNEVFNDVR Unmodified 2088.0065 0.0064889465 1705 P52907 CAPZA1 F-actin-capping protein subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 80.694 80.85 3 2.7975E-05 93115 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.89 61.651 34942000 0 0 0 0 0 0 0 0 0 4086900 0 5742600 0 0 25113000 16401 1705 14941 137136;137137;137138 109057 109057 1 FITIFGTR Unmodified 953.53345 0.53345218 873 P08758 ANXA5 Annexin A5 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 79.842 79.908 2 0.0060433 92365 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 104.21 59.236 163420000 0 0 0 5713000 0 5229100 0 4608700 0 0 20660000 30736000 0 16282000 80192000 16402 873 14942 137139;137140;137141;137142;137143;137144;137145 109058;109059;109060;109061;109062 109059 5 FITLLADTSDSR Unmodified 1337.6827 0.68269519 3315 Q8N201 INTS1 Integrator complex subunit 1 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 77.095 77.112 2 0.0057565 89040 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 63.283 51.236 16091000 0 0 0 1730000 1599700 0 0 0 0 0 2180200 3250800 1219100 2366000 3745400 16403 3315 14943 137146;137147;137148;137149;137150;137151;137152 109063;109064;109065 109064 3 FITPAHYSDVVDER Unmodified 1647.7893 0.78928553 3267 Q8IXW5 RPAP2 Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 62.443 62.504 3 0.00081149 70622 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 59.709 49.787 64877000 0 0 0 2584800 2237400 7150400 3530200 5262700 3216800 6675500 7428000 0 6910700 5428300 14452000 16404 3267 14944 137153;137154;137155;137156;137157;137158;137159;137160;137161;137162;137163 109066;109067;109068;109069;109070;109071;109072;109073 109070 7 FITPEDLSK Unmodified 1048.5441 0.54407645 686 O95757 HSPA4L Heat shock 70 kDa protein 4L yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.18 3.74 3 1 7 1 2 1 1 1 1 1 1 1 1 63.665 61.713 2 0.00045211 75483 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 124.98 77.916 1104700000 32333000 945750000 30737000 5151100 0 0 6325800 0 0 7354400 18217000 13117000 0 12893000 32798000 16405 686 14945 137164;137165;137166;137167;137168;137169;137170;137171;137172;137173;137174 109074;109075;109076;109077;109078;109079;109080;109081;109082;109083;109084;109085;109086;109087;109088 109081 15 FITQTAR Unmodified 835.4552 0.45520186 2165 Q08AF3 SLFN5 Schlafen family member 5 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.682 21.887 2 0.050025 21515 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 63.148 16.381 293220000 0 0 0 15597000 17286000 25207000 17820000 25413000 16106000 26010000 29597000 35719000 32916000 23510000 28033000 16406 2165 14946 137175;137176;137177;137178;137179;137180;137181;137182;137183;137184;137185;137186 109089 109089 1 FITSSASDFSDPVYK Unmodified 1662.7777 0.77771779 3222 Q8IV48 ERI1 3'-5' exoribonuclease 1 yes yes 0 0 0 By MS/MS 2 0 1 1 76.875 72.037 2 1.6137E-22 89970 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 143.17 107.23 142900000 0 142900000 0 0 0 0 0 0 0 0 0 0 0 0 0 16407 3222 14947 137187 109090;109091 109091 2 FITYPFDQNR Unmodified 1299.6248 0.62478638 3366 Q8N7H5 PAF1 RNA polymerase II-associated factor 1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 73.93 73.98 2 0.0025724 84299 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 88.37 62.431 267190000 0 0 0 0 31399000 0 32181000 42644000 0 48630000 0 0 52328000 60006000 0 16408 3366 14948 137188;137189;137190;137191;137192;137193;137194 109092;109093;109094;109095 109095 4 FIVCLNK Unmodified 892.48406 0.48405915 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 63.006 61.711 2 0.034431 79814 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.061 40.258 729520000 346400000 70425000 0 13773000 18424000 24355000 19436000 27465000 19186000 30684000 30626000 0 27434000 41007000 60314000 16409 1986 14949 137195;137196;137197;137198;137199;137200;137201;137202;137203;137204;137205;137206;137207;137208 109096;109097;109098 109096 3 FIVDGVEVSVTTSK Unmodified 1479.7821 0.78207489 4365 Q9H2G2 SLK STE20-like serine/threonine-protein kinase yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 82.969 77.659 2 0.00082432 99282 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 111.63 71.628 46609000 44096000 0 2513400 0 0 0 0 0 0 0 0 0 0 0 0 16410 4365 14950 137209;137210 109099;109100;109101 109100 3 FIVDQTQTPNLK Unmodified 1402.7456 0.7456298 3094 Q7Z460 CLASP1 CLIP-associating protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.728 62.823 2 1.7952E-05 71664 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 105.52 81.49 147200000 0 0 0 7543500 8236900 9030000 13122000 13211000 5611700 11825000 17372000 19988000 13261000 9710800 18285000 16411 3094 14951 137211;137212;137213;137214;137215;137216;137217;137218;137219;137220;137221;137222 109102;109103;109104;109105;109106;109107;109108;109109;109110;109111;109112 109104 11 FIVDYCEK Unmodified 1072.4899 0.48993238 3813 Q96EK5 KIAA1279 KIF1-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 54.469 54.713 2 0.023266 61944 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 60.478 44.846 61630000 0 0 0 0 0 10823000 6317600 4170500 2973800 10181000 12901000 0 0 0 14265000 16412 3813 14952 137223;137224;137225;137226;137227;137228;137229 109113;109114;109115 109115 3 FIVNTLK Unmodified 833.50109 0.50108942 1221 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.385 55.516 2 0.023406 62612 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 86.866 9.1177 123690000 0 0 0 5327900 5131600 9888000 6669500 9200000 3819400 13359000 11987000 15241000 9872200 9886500 23307000 16413 1221 14953 137230;137231;137232;137233;137234;137235;137236;137237;137238;137239;137240;137241 109116;109117;109118;109119 109117 4 FKDPNAPK Unmodified 915.48142 0.48141661 883;1161 P09429;B2RPK0;P23497 HMGB1;HMGB1P1;SP100 High mobility group protein B1;Putative high mobility group protein B1-like 1;Nuclear autoantigen Sp-100 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13.031 12.493 2 0.02071 11008 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 126.28 103.35 706220000 98665000 178290000 102420000 21957000 23165000 7847800 24708000 22685000 8860100 29322000 45591000 35923000 20810000 21421000 64562000 16414 883;1161 14954 137242;137243;137244;137245;137246;137247;137248;137249;137250;137251;137252;137253;137254;137255;137256 109120;109121;109122;109123;109124;109125;109126;109127;109128;109129;109130 109125 1 FKEEGVRDVLK Unmodified 1318.7245 0.72450043 1441 P41252 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 40.831 41.063 3 0.037939 44534 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.784 23.894 125020000 0 0 0 6181200 0 13096000 0 12823000 0 13948000 0 22663000 0 15274000 41031000 16415 1441 14955 137257;137258;137259;137260;137261;137262;137263 109131 109131 0 FLAAASGLGEK Unmodified 1062.571 0.5709599 2996 Q6YHU6 THADA Thyroid adenoma-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 5 1 1 3 64.069 59.302 2 0.029906 67160 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 53.124 3.7057 470360000 74660000 50861000 344840000 0 0 0 0 0 0 0 0 0 0 0 0 16416 2996 14956 137264;137265;137266;137267;137268 109132;109133;109134;109135 109132 4 FLADDFDVK Unmodified 1068.5128 0.51277632 2005 P83436 COG7 Conserved oligomeric Golgi complex subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9 2.65 1 7 1 1 1 1 1 1 1 1 71.936 70.816 2 0.0084462 82189 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 69.598 43.704 51896000 24942000 0 0 0 2750800 0 5080500 4729800 2467100 6301700 0 0 5623700 0 0 16417 2005 14957 137269;137270;137271;137272;137273;137274;137275;137276 109136;109137;109138;109139;109140;109141;109142 109142 7 FLADQQSEIDGLK Unmodified 1462.7304 0.73037367 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 66.37 64.761 2 1.9517E-34 75398 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 199.09 161 1282300000 38535000 470660000 12713000 40078000 37002000 49303000 49090000 46190000 41536000 74945000 87043000 90684000 67627000 70963000 105950000 16418 965 14958 137277;137278;137279;137280;137281;137282;137283;137284;137285;137286;137287;137288;137289;137290;137291;137292;137293 109143;109144;109145;109146;109147;109148;109149;109150;109151;109152;109153;109154;109155;109156;109157;109158;109159;109160;109161;109162;109163;109164;109165;109166 109165 23 FLAEEGFYK Unmodified 1102.5335 0.53351176 1520 P46977 STT3A Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 64.014 63.991 2 0.020656 73134 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 52.937 22.752 31684000 0 0 0 5059900 2858500 3099300 5187600 0 2568000 3592100 0 6028900 3290000 0 0 16419 1520 14959 137294;137295;137296;137297;137298;137299;137300;137301 109167;109168;109169 109167 3 FLALEGNPLR Unmodified 1128.6291 0.62914348 4468 Q9H9A6 LRRC40 Leucine-rich repeat-containing protein 40 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 77.618 77.657 2 0.00037094 88887 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 129.47 88.036 372380000 0 0 0 23248000 24800000 41316000 27548000 35304000 20408000 44712000 37867000 55419000 30248000 31515000 0 16420 4468 14960 137302;137303;137304;137305;137306;137307;137308;137309;137310;137311;137312 109170;109171;109172;109173;109174 109173 2 FLALQSK Unmodified 805.46979 0.46978929 3924 Q96MF7 NSMCE2 E3 SUMO-protein ligase NSE2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45.632 44.595 2 0.01947 61333 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 114.19 39.469 376740000 52150000 25828000 7282900 14459000 19702000 22138000 31017000 17849000 16341000 20619000 35386000 27829000 24232000 24820000 37090000 16421 3924 14961 137313;137314;137315;137316;137317;137318;137319;137320;137321;137322;137323;137324;137325;137326;137327 109175;109176;109177;109178;109179;109180;109181;109182;109183;109184;109185;109186;109187;109188;109189;109190;109191;109192 109180 18 FLANVSTVLTSK Unmodified 1278.7184 0.71835242 55 CON__P01966 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 77.673 77.779 2 5.8984E-06 89316 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.39 83.133 + 107330000 0 0 0 0 5529000 10161000 6016700 6297100 9743600 12388000 9962300 11061000 8486500 9364900 18317000 16422 55 14962 137328;137329;137330;137331;137332;137333;137334;137335;137336;137337;137338 109193;109194;109195;109196;109197;109198;109199;109200;109201;109202;109203 109196 11 FLAQGTMEDK Unmodified 1138.5329 0.53285983 1498 P46100 ATRX Transcriptional regulator ATRX yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 38.018 38.417 2 0.0015513 41460 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.178 70.686 6095700 0 0 0 0 0 0 1976100 0 0 0 0 0 0 0 4119600 16423 1498 14963 137339;137340;137341;137342 109204;109205;109206 109204 3 FLAQGTMEDK Oxidation (M) 1154.5278 0.52777445 1498 P46100 ATRX Transcriptional regulator ATRX yes yes 0 1 0 By MS/MS 10 0 1 1 23.892 24.223 2 0.02483 24500 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 57.177 46.763 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16424 1498 14963 137343 109207 109207 1 FLATGATDGR Unmodified 1007.5036 0.50360861 2545 Q15542 TAF5 Transcription initiation factor TFIID subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 29.948 30.276 2 0.008766 31662 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.245 32.283 25429000 0 0 0 0 6088700 0 0 0 0 0 0 7382700 0 4862800 7094800 16425 2545 14964 137344;137345;137346;137347 109208;109209;109210 109208 3 FLAVGLVDNTVR Unmodified 1302.7296 0.7295858 2528 Q15393 SF3B3 Splicing factor 3B subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.648 80.71 2 1.9205E-08 93346 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 135.55 78.819 877200000 0 0 0 17254000 41983000 60770000 47152000 52958000 47814000 105120000 73250000 127390000 50414000 72999000 180090000 16426 2528 14965 137348;137349;137350;137351;137352;137353;137354;137355;137356;137357;137358;137359 109211;109212;109213;109214;109215;109216;109217;109218;109219;109220;109221;109222;109223;109224;109225;109226;109227 109219 17 FLDAGHK Unmodified 786.40244 0.40243801 1270 P30101 PDIA3 Protein disulfide-isomerase A3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 7.09 3.85 4 7 1 1 2 1 1 1 1 1 1 1 14.619 13.609 2 0.025641 20056 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 99.919 64.814 4763200000 2507700000 458490000 1710800000 0 0 5319700 8056800 6213100 4622800 0 16650000 0 0 429160 44849000 16427 1270 14966 137360;137361;137362;137363;137364;137365;137366;137367;137368;137369;137370 109228;109229;109230;109231;109232;109233;109234;109235 109232 8 FLDASGAK Unmodified 807.41267 0.41266834 3043 Q7L1Q6 BZW1 Basic leucine zipper and W2 domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 24.91 24.33 2 0.0083611 25917 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 86.472 17.297 2452600000 71149000 1149300000 0 0 0 108240000 103010000 76310000 64575000 134900000 134360000 152060000 115910000 125900000 216860000 16428 3043 14967 137371;137372;137373;137374;137375;137376;137377;137378;137379;137380;137381;137382 109236;109237;109238;109239;109240;109241;109242;109243;109244;109245;109246 109245 7 FLDAYAEHK Unmodified 1092.524 0.52400971 770 P04062 GBA Glucosylceramidase yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 40.061 37.986 2 0.0038222 42868 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 88.819 64.664 14054000 0 0 8363500 5690200 0 0 0 0 0 0 0 0 0 0 0 16429 770 14968 137383;137384 109247;109248 109248 2 FLDCPDELMEK Oxidation (M) 1411.6 0.59995312 3328 Q8N3Y7 SDR16C5 Epidermal retinol dehydrogenase 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 58.586 58.299 2 0.00033917 67184 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 82.749 54.023 7915400 0 0 0 5632100 0 0 2283400 0 0 0 0 0 0 0 0 16430 3328 14969 137385;137386;137387 109249;109250 109249 4923 2 FLDDLGNAK Unmodified 991.49746 0.4974606 693 O95816 BAG2 BAG family molecular chaperone regulator 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 53.72 52.403 2 2.4034E-06 63732 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 176.66 91.397 1635900000 52035000 1049900000 23143000 20934000 26047000 37777000 32288000 30830000 24126000 48429000 52423000 65119000 42512000 42586000 87809000 16431 693 14970 137388;137389;137390;137391;137392;137393;137394;137395;137396;137397;137398;137399;137400;137401;137402;137403 109251;109252;109253;109254;109255;109256;109257;109258;109259;109260;109261;109262;109263;109264;109265;109266;109267 109259 16 FLDEDFVFDIYRDSRGK Unmodified 2121.0167 0.016719282 541 O75794 CDC123 Cell division cycle protein 123 homolog yes yes 0 0 2 By MS/MS 2 0 1 1 95.812 87.682 4 0.0045735 113252 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.647 33.986 11215000 11215000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16432 541 14971 137404 109268 109268 1 FLDEISSTETK Unmodified 1268.6136 0.61361257 2511 Q15283 RASA2 Ras GTPase-activating protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 57.479 51.657 2 0.00045268 66591 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.2 83.459 40754000 0 40754000 0 0 0 0 0 0 0 0 0 0 0 0 0 16433 2511 14972 137405 109269;109270 109270 2 FLDELDAVQMD Oxidation (M) 1310.57 0.5700332 260 O15160 POLR1C DNA-directed RNA polymerases I and III subunit RPAC1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 78.583 78.678 2 0.0036442 90521 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.815 49.421 56053000 0 0 0 0 4455700 6135700 5941600 5549800 0 7211100 7550900 6109400 4106600 0 8992000 16434 260 14973 137406;137407;137408;137409;137410;137411;137412;137413;137414 109271;109272;109273 109272 348 3 FLDGDELTLADCNLLPK Unmodified 1932.9503 0.9502792 3939 Q9NZA1;Q96NY7 CLIC5;CLIC6 Chloride intracellular channel protein 5;Chloride intracellular channel protein 6 yes no 0 0 0 By MS/MS 2 0 1 1 95.132 87.001 2 0.0005793 112432 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.692 67.787 18298000 18298000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16435 3939 14974 137415 109274 109274 1 FLDGELPLDSFIDVYQSK Unmodified 2085.0306 0.030638012 4473 Q9H9H4 VPS37B Vacuolar protein sorting-associated protein 37B yes yes 0 0 0 By MS/MS 3 0 1 1 98.732 95.381 2 0.0016777 114452 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 69.03 53.087 2225700 0 2225700 0 0 0 0 0 0 0 0 0 0 0 0 0 16436 4473 14975 137416 109275 109275 1 FLDGIYVSEK Unmodified 1169.5968 0.5968403 1326 P32969 RPL9 60S ribosomal protein L9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72.657 72.168 2 0.0034899 82239 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.098 71.798 605520000 0 133740000 25409000 19861000 19644000 31027000 26416000 43837000 30085000 42641000 49264000 55263000 38942000 36415000 52979000 16437 1326 14976 137417;137418;137419;137420;137421;137422;137423;137424;137425;137426;137427;137428;137429;137430 109276;109277;109278;109279;109280;109281;109282;109283;109284;109285;109286;109287;109288;109289;109290 109281 14 FLDGNELTLADCNLLPK Unmodified 1931.9663 0.96626362 140 O00299 CLIC1 Chloride intracellular channel protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching 2.11 0.314 8 1 1 7 1 93.687 88.899 2;3 6.9108E-70 111359 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 217.12 196.92 2509200000 59197000 2442500000 7517100 0 0 0 0 0 0 0 0 0 0 0 0 16438 140 14977 137431;137432;137433;137434;137435;137436;137437;137438;137439 109291;109292;109293;109294;109295;109296;109297;109298 109292 8 FLDGNEMTLADCNLLPK Unmodified 1949.9227 0.92268424 5270 Q9Y696 CLIC4 Chloride intracellular channel protein 4 yes yes 0 0 0 By MS/MS 2 0 1 1 91.974 87.063 3 0.0036105 108177 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 43.767 30.471 38638000 0 38638000 0 0 0 0 0 0 0 0 0 0 0 0 0 16439 5270 14978 137440 109299 109299 1 FLDINLYK Unmodified 1024.5593 0.55933258 4598 Q9NRF8 CTPS2 CTP synthase 2 yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.894 79.949 2 0.0097801 92148 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.784 9.6455 42879000 0 0 0 1595600 1279600 2581400 1636500 2004600 2147600 0 4131200 6454600 1787300 5301900 13959000 16440 4598 14979 137441;137442;137443;137444;137445;137446;137447;137448;137449;137450;137451 109300;109301;109302 109300 3 FLDLWNK Unmodified 934.49125 0.49125301 3854 Q96GG9 DCUN1D1 DCN1-like protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 85.622 77.491 2 0.02375 100987 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.11 54.799 62275000 62275000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16441 3854 14980 137452 109303 109303 1 FLDPDMYSLLEDSTSDLRSK Unmodified 2331.094 0.094042904 4911 Q9UHW5 GPN3 GPN-loop GTPase 3 yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 96.08 90.387 3 1.1012E-71 114658 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 121.82 103.52 43874000 40644000 3229800 0 0 0 0 0 0 0 0 0 0 0 0 0 16442 4911 14981 137453;137454 109304;109305;109306 109306 3 FLDPITGTFR Unmodified 1165.6132 0.61315906 1420 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 82.065 82.086 2 0.0035335 95029 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 87.308 52.5 43956000 0 0 0 1272600 2023200 4073600 0 0 0 4815200 5046500 4716900 2095500 3906700 16006000 16443 1420 14982 137455;137456;137457;137458;137459;137460;137461;137462;137463 109307;109308;109309;109310;109311;109312 109310 6 FLDPNTLER Unmodified 1103.5611 0.56112349 1802 P58107 EPPK1 Epiplakin yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 59.748 59.924 2 0.010372 68515 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 64.42 41.378 10287000 0 0 0 0 0 0 0 10287000 0 0 0 0 0 0 0 16444 1802 14983 137464;137465 109313;109314 109314 2 FLDQNLQK Unmodified 1004.5291 0.52909508 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 2 1 1 1 1 1 1 39.52 39.657 2 0.0044025 42943 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 130.77 82.85 1407400000 0 0 0 343720000 90490000 81516000 0 340720000 2048100 85491000 115700000 155730000 137660000 54369000 0 16445 1029 14984 137466;137467;137468;137469;137470;137471;137472;137473;137474;137475;137476 109315;109316;109317;109318;109319;109320;109321;109322;109323;109324;109325;109326;109327 109322 10 FLDQSGPPSGDVNSLDK Unmodified 1774.8374 0.83735793 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 62.184 61.435 2 0.00037925 76158 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.365 66.556 175330000 0 20328000 0 12634000 0 0 0 0 0 21419000 32334000 35612000 28117000 24885000 0 16446 2193 14985 137477;137478;137479;137480;137481;137482;137483 109328;109329;109330;109331;109332;109333;109334 109329 7 FLDSTGSR Unmodified 881.4243 0.42429566 5280 Q9Y6E2 BZW2 Basic leucine zipper and W2 domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.912 22.118 2 3.8188E-07 22897 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 158.12 102.51 1036000000 0 0 0 56752000 54367000 75536000 84595000 62203000 59065000 99265000 130190000 120200000 98329000 68863000 126630000 16447 5280 14986 137484;137485;137486;137487;137488;137489;137490;137491;137492;137493;137494;137495 109335;109336;109337;109338;109339;109340;109341;109342;109343;109344;109345;109346 109339 9 FLDTSHYSTAGSSSVR Unmodified 1713.7958 0.79582747 3733 Q96A65 EXOC4 Exocyst complex component 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 43.977 43.941 3 0.00023296 49315 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 65.107 51.97 61839000 0 0 0 0 11312000 22701000 0 15681000 12146000 0 0 0 0 0 0 16448 3733 14987 137496;137497;137498;137499 109347;109348;109349;109350 109347 4 FLDVLELAEK Unmodified 1175.6438 0.64379049 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 91.182 89.335 2 0.00091496 112641 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 113.62 87.238 49995000 19446000 14956000 6326100 0 0 1502400 0 802390 0 2375000 1210700 0 0 0 3377100 16449 5049 14988 137500;137501;137502;137503;137504;137505;137506;137507;137508;137509;137510 109351;109352;109353;109354;109355;109356;109357;109358;109359;109360 109355 10 FLEDALGQK Unmodified 1019.5288 0.52876073 3008 Q6ZS17 FAM65A Protein FAM65A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 53.968 54.019 2 0.0030679 60970 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 97.093 36.333 65489000 0 0 0 4233600 3869900 9594000 3592200 0 0 8818800 10236000 0 0 9836900 15307000 16450 3008 14989 137511;137512;137513;137514;137515;137516;137517;137518;137519 109361;109362;109363;109364;109365;109366;109367;109368;109369;109370;109371 109363 11 FLEEATR Unmodified 864.43413 0.43413207 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching 10 0 5 1 1 1 1 1 29.319 29.622 2 0.028147 31784 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 76.847 32.154 40268000 0 0 0 0 0 0 9029100 0 7351700 0 0 0 1882700 14977000 7026800 16451 1300 14990 137520;137521;137522;137523;137524 109372;109373;109374 109372 3 FLEEATRVSQEHPVVLTK Unmodified 2082.111 0.11095402 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 0 1 By MS/MS By matching 2.33 0.471 2 1 2 1 72.3 66.715 3 0.00069304 88017 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.595 37.207 129950000 127990000 0 1962200 0 0 0 0 0 0 0 0 0 0 0 0 16452 1300 14991 137525;137526;137527 109375;109376 109376 2 FLEEEVYPLLK Unmodified 1378.7384 0.73841916 1285 P30566 ADSL Adenylosuccinate lyase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 85.616 85.768 2 2.3545E-05 99056 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 122.13 72.095 49283000 0 0 0 0 0 0 0 3143400 0 3700900 6377700 5596100 0 4504500 25960000 16453 1285 14992 137528;137529;137530;137531;137532;137533 109377;109378;109379;109380;109381;109382 109378 6 FLEEGNLEEAEIQK Unmodified 1647.7992 0.79918151 4401 Q9H4L5 OSBPL3 Oxysterol-binding protein-related protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 67.71 67.856 2 2.8847E-19 77792 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 149.23 130.96 102520000 0 0 0 0 7520200 13364000 7860400 0 8911400 10214000 10249000 12860000 8875000 9345000 13319000 16454 4401 14993 137534;137535;137536;137537;137538;137539;137540;137541;137542;137543;137544 109383;109384;109385;109386;109387;109388;109389;109390;109391;109392;109393;109394;109395;109396;109397;109398;109399 109389 17 FLEELGEGK Unmodified 1020.5128 0.51277632 1766 P55265 ADAR Double-stranded RNA-specific adenosine deaminase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 53.873 53.945 2 0.013737 61041 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 59.35 30.451 11568000 0 0 0 0 0 7507500 4060100 0 0 0 0 0 0 0 0 16455 1766 14994 137545;137546;137547 109400;109401;109402 109400 3 FLEEQEITDLK Unmodified 1363.6871 0.68711187 433 O60825 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 73.578 72.178 2 9.0577E-22 83114 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 170.99 140.31 1098100000 31296000 350690000 8322200 0 96657000 0 97838000 102760000 77608000 0 92524000 88983000 69131000 0 82315000 16456 433 14995 137548;137549;137550;137551;137552;137553;137554;137555;137556;137557;137558;137559;137560;137561;137562;137563;137564 109403;109404;109405;109406;109407;109408;109409;109410;109411;109412;109413;109414;109415;109416;109417;109418;109419;109420;109421 109408 18 FLEESVSMSPEER Oxidation (M) 1554.6872 0.68718822 1020 P15374 UCHL3 Ubiquitin carboxyl-terminal hydrolase isozyme L3 yes yes 0 1 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 47.134 47.46 2 9.1631E-06 53257 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 90.685 64.747 41897000 0 0 0 0 0 3070000 2850900 2094800 0 4536500 8359600 8681100 0 4652600 7651400 16457 1020 14996 137565;137566;137567;137568;137569;137570;137571;137572;137573 109422;109423;109424;109425;109426 109423 1416 5 FLEESVSMSPEER Unmodified 1538.6923 0.6922736 1020 P15374 UCHL3 Ubiquitin carboxyl-terminal hydrolase isozyme L3 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 62.448 61.616 2 5.5803E-09 70568 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 130.94 100.38 76092000 0 25676000 0 1713700 0 0 0 0 0 0 9609400 7628200 0 5983900 25481000 16458 1020 14996 137574;137575;137576;137577;137578;137579 109427;109428;109429;109430;109431 109429 5 FLEESVSMSPEERAR Unmodified 1765.8305 0.83049842 1020 P15374 UCHL3 Ubiquitin carboxyl-terminal hydrolase isozyme L3 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 61.293 55.252 3 0.014103 68719 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 39.509 26.631 9146000 4894500 0 4251400 0 0 0 0 0 0 0 0 0 0 0 0 16459 1020 14997 137580;137581 109432 109432 1 FLEETNCLYAAEGQR Unmodified 1799.8148 0.81484835 2331 Q13619 CUL4A Cullin-4A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.23 3.24 2 1 10 2 1 1 1 1 1 1 1 1 1 1 1 68.321 67.591 2;3 1.1956E-30 77805 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 172.34 140.49 93181000 0 17537000 2185400 0 0 9394500 5208300 0 4822400 11882000 10568000 7679000 0 6859000 17045000 16460 2331 14998 137582;137583;137584;137585;137586;137587;137588;137589;137590;137591;137592;137593;137594 109433;109434;109435;109436;109437;109438;109439;109440;109441;109442;109443;109444 109433 12 FLEETNR Unmodified 907.43995 0.43994572 2332 Q13620 CUL4B Cullin-4B yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 24.137 24.132 2 0.023725 25378 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 84.244 22.246 32705000 0 0 0 0 4964100 10182000 7055600 6183900 4319400 0 0 0 0 0 0 16461 2332 14999 137595;137596;137597;137598;137599 109445;109446;109447 109447 2 FLEEYLSSTPQR Unmodified 1468.7198 0.71980898 1859 P61803 DAD1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 yes yes 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 72.134 72.11 2 1.0159E-05 83665 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 108.67 74.135 12509000 0 0 0 4414300 0 0 0 4149200 0 0 0 3945700 0 0 0 16462 1859 15000 137600;137601;137602 109448 109448 1 FLEHLSGAGK Unmodified 1057.5556 0.55564418 2064 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37.936 37.039 2 0.00093449 40423 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 112.11 79.497 1196900000 351170000 132910000 47414000 30221000 32383000 53675000 40778000 50833000 33092000 55464000 52864000 119340000 58031000 45617000 93121000 16463 2064 15001 137603;137604;137605;137606;137607;137608;137609;137610;137611;137612;137613;137614;137615;137616;137617 109449;109450;109451;109452;109453;109454;109455;109456;109457;109458;109459;109460;109461;109462;109463 109456 11 FLELVQLK Unmodified 988.59572 0.59571809 4024 Q99570 PIK3R4 Phosphoinositide 3-kinase regulatory subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.973 82.034 2 0.0058895 94874 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 105.12 44.155 54723000 0 0 0 1524000 2451100 5325400 3074700 3863700 3178800 6945200 5304600 5484400 2866100 4653500 10052000 16464 4024 15002 137618;137619;137620;137621;137622;137623;137624;137625;137626;137627;137628;137629 109464;109465;109466;109467;109468;109469;109470;109471;109472;109473;109474;109475 109465 12 FLEMCNDLLAR Oxidation (M) 1396.6479 0.64790636 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 1 0 By MS/MS 10 0 1 1 68.45 68.944 2 0.00031002 78527 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.213 60.837 4989600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4989600 16465 1337 15003 137630 109476;109477 109476 2015 2 FLEMHQL Unmodified 916.44767 0.44767364 5261 Q9Y617 PSAT1 Phosphoserine aminotransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 74.351 68.9 2 0.014308 84097 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 140.01 85.487 1020600000 513670000 296660000 210240000 0 0 0 0 0 0 0 0 0 0 0 0 16466 5261 15004 137631;137632;137633 109478;109479;109480;109481;109482 109480 5 FLEMHQL Oxidation (M) 932.44259 0.44258826 5261 Q9Y617 PSAT1 Phosphoserine aminotransferase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 5.12 3.79 4 1 3 2 2 1 1 1 1 50.005 46.377 2 0.019335 57811 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 107.65 107.65 855990000 268790000 264970000 294240000 0 0 0 0 0 0 0 0 6143900 0 6459800 15393000 16467 5261 15004 137634;137635;137636;137637;137638;137639;137640;137641 109483;109484;109485;109486;109487 109484 6660 5 FLENHEK Unmodified 915.44503 0.4450311 494 O75400 PRPF40A Pre-mRNA-processing factor 40 homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 10.455 10.565 2 0.023384 8002 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.029 62.202 137200000 0 0 0 11299000 0 19206000 29298000 0 0 14676000 0 28069000 0 0 34654000 16468 494 15005 137642;137643;137644;137645;137646;137647 109488;109489;109490 109489 3 FLENVAAAETEK Unmodified 1320.6561 0.65614609 5260 Q9Y613 FHOD1 FH1/FH2 domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 54.299 54.457 2 4.4131E-08 61941 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 122.69 99.951 29594000 0 0 0 0 0 14756000 0 0 0 0 0 0 14837000 0 0 16469 5260 15006 137648;137649 109491;109492 109491 2 FLEPTLR Unmodified 874.49125 0.49125301 1009 P14868 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 57.339 57.461 2 0.023406 65307 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 86.866 31.425 195930000 0 0 0 10855000 14925000 17881000 14244000 10688000 9788300 16826000 17631000 24344000 11669000 14647000 32430000 16470 1009 15007 137650;137651;137652;137653;137654;137655;137656;137657;137658;137659;137660;137661 109493;109494;109495;109496;109497;109498 109493 6 FLEQKNK Unmodified 905.49707 0.49706667 108 CON__Q9NSB4;Q9NSB4 KRT82 Keratin, type II cuticular Hb2 yes no 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 28.058 23.747 2 0.034038 29637 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 132.09 10.802 + 2687800000 1836400000 423780000 427620000 0 0 0 0 0 0 0 0 0 0 0 0 16471 108 15008 137662;137663;137664 109499 109499 0 FLEQLEEQEK Unmodified 1291.6296 0.62959699 3509 Q8TDY2 RB1CC1 RB1-inducible coiled-coil protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 8.67 2.98 1 5 1 1 1 1 1 1 58.855 58.189 2 2.1021E-05 73380 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.83 90.606 56409000 0 37608000 0 0 0 0 0 0 2337700 0 3661200 4148700 0 3517500 5135700 16472 3509 15009 137665;137666;137667;137668;137669;137670 109500;109501 109500 2 FLEQLQELDAK Unmodified 1332.6925 0.6925316 3310 Q8N1B4 VPS52 Vacuolar protein sorting-associated protein 52 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.916 77.975 2 4.6229E-16 90105 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 163.94 141.2 107090000 0 0 0 3788100 5534300 10284000 6338200 7708000 5758500 10376000 10637000 14418000 10257000 8605000 13382000 16473 3310 15010 137671;137672;137673;137674;137675;137676;137677;137678;137679;137680;137681;137682 109502;109503;109504;109505;109506;109507;109508;109509;109510;109511;109512 109502 11 FLEQQNK Unmodified 905.46068 0.46068117 74;870;66;58;779;67;88;69;80;100;96;51;960;2056;83;53;105;107;81;98 P08670;P04259;CON__H-INV:HIT000292931;CON__P05787;P05787;CON__P50446;CON__Q8BGZ7;CON__Q01546;P12035;CON__P12035;Q01546;CON__P13647;P13647;CON__Q7RTT2;CON__Q8N1N4-2;Q8N1N4;CON__O95678;O95678;CON__P02538;P02538;CON__P04259;CON__Q5XKE5;Q5XKE5;CON__P08729;CON__Q3KNV1;P08729;CON__Q6ISB0;CON__Q9NSB2;Q9NSB2;CON__Q9DCV7;CON__Q6NT21;CON__P78385;P78385 VIM;KRT6B;KRT8;KRT3;KRT76;KRT5;KRT78;KRT75;KRT6A;KRT79;KRT7;KRT84;KRT83 Vimentin;Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 8;Keratin, type II cytoskeletal 3;Keratin, type II cytoskeletal 2 oral;Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 78;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 79;Keratin, type II cytoskeletal 7;Keratin, type II cuticular Hb4;Keratin, type II cuticular Hb3 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.73 15.9 2 0.018785 15722 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 111.28 27.664 + 17117000000 0 0 0 2615400000 841890000 968300000 1186700000 1764400000 666910000 1427300000 1627500000 1290000000 2453800000 1355400000 919230000 16474 870;779;51;67;80;105;83;960;2056;74;100;53;58;66;96;69;88;98;107;81 15011 137683;137684;137685;137686;137687;137688;137689;137690;137691;137692;137693;137694 109513;109514;109515;109516;109517;109518;109519;109520;109521;109522;109523;109524;109525;109526;109527;109528;109529 109521 17 FLEQQNQVLETK Unmodified 1475.762 0.76200815 91 CON__Q3SY84;Q3SY84 KRT71 Keratin, type II cytoskeletal 71 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 43 4 3 4 3 4 2 3 4 4 4 4 4 54.756 54.896 2 7.6009E-82 59887 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 203.8 162.77 + 2591500000 0 0 0 499940000 109910000 158790000 119060000 321790000 65685000 183880000 147170000 330330000 330110000 207780000 117020000 16475 91 15012 137695;137696;137697;137698;137699;137700;137701;137702;137703;137704;137705;137706;137707;137708;137709;137710;137711;137712;137713;137714;137715;137716;137717;137718;137719;137720;137721;137722;137723;137724;137725;137726;137727;137728;137729;137730;137731;137732;137733;137734;137735;137736;137737 109530;109531;109532;109533;109534;109535;109536;109537;109538;109539;109540;109541;109542;109543;109544;109545;109546;109547;109548;109549;109550;109551;109552;109553;109554;109555;109556;109557;109558;109559;109560;109561;109562;109563;109564;109565;109566;109567;109568;109569;109570;109571;109572;109573;109574;109575;109576;109577;109578;109579;109580;109581;109582;109583;109584;109585;109586;109587;109588 109567 59 FLEQQNQVLQTK Unmodified 1474.778 0.77799256 79;780;103;50;109 CON__ENSEMBL:ENSBTAP00000038253;P04264;CON__P04264;CON__P35908v2;P35908;CON__P35908;CON__Q7Z794;Q7Z794;CON__Q9R0H5 KRT1;KRT2;KRT77 Keratin, type II cytoskeletal 1;Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 1b no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.65 1.63 4 1 105 2 2 1 18 8 7 6 16 5 8 5 11 13 5 3 58.087 57.986 2;3 9.0619E-263 58144 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 257.92 210.73 + 129250000000 5895500 15502000 1721800 19069000000 7999800000 9391800000 6029400000 19634000000 6031900000 11743000000 9998300000 15586000000 11995000000 6497700000 5251100000 16476 50;780;79;103;109 15013 137738;137739;137740;137741;137742;137743;137744;137745;137746;137747;137748;137749;137750;137751;137752;137753;137754;137755;137756;137757;137758;137759;137760;137761;137762;137763;137764;137765;137766;137767;137768;137769;137770;137771;137772;137773;137774;137775;137776;137777;137778;137779;137780;137781;137782;137783;137784;137785;137786;137787;137788;137789;137790;137791;137792;137793;137794;137795;137796;137797;137798;137799;137800;137801;137802;137803;137804;137805;137806;137807;137808;137809;137810;137811;137812;137813;137814;137815;137816;137817;137818;137819;137820;137821;137822;137823;137824;137825;137826;137827;137828;137829;137830;137831;137832;137833;137834;137835;137836;137837;137838;137839;137840;137841;137842;137843;137844;137845;137846;137847 109589;109590;109591;109592;109593;109594;109595;109596;109597;109598;109599;109600;109601;109602;109603;109604;109605;109606;109607;109608;109609;109610;109611;109612;109613;109614;109615;109616;109617;109618;109619;109620;109621;109622;109623;109624;109625;109626;109627;109628;109629;109630;109631;109632;109633;109634;109635;109636;109637;109638;109639;109640;109641;109642;109643;109644;109645;109646;109647;109648;109649;109650;109651;109652;109653;109654;109655;109656;109657;109658;109659;109660;109661;109662;109663;109664;109665;109666;109667;109668;109669;109670;109671;109672;109673;109674;109675;109676;109677;109678;109679;109680;109681;109682;109683;109684;109685;109686;109687;109688;109689;109690;109691;109692;109693;109694;109695;109696;109697;109698;109699;109700;109701;109702;109703;109704;109705;109706;109707;109708;109709;109710;109711;109712;109713;109714;109715;109716;109717;109718;109719;109720;109721 109666 123 FLEQQTLCNNQVNDLTTALK Unmodified 2349.1635 0.16345987 5183 Q9Y448 KNSTRN Small kinetochore-associated protein yes yes 0 0 0 By matching By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 82.224 82.302 2 0.010903 94998 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.351 29.529 16220000 0 0 0 0 1122900 0 0 0 0 2683600 3697100 3359600 0 0 5356900 16477 5183 15014 137848;137849;137850;137851;137852 109722 109722 1 FLEQSMDIEDLK Oxidation (M) 1482.6912 0.69121097 632 O95239;Q2VIQ3 KIF4A;KIF4B Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 67.289 66.678 2 2.8637E-05 85846 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 102.06 87.382 83820000 5625800 0 0 4442100 5054800 7215500 0 7622100 6392500 7775900 9172900 10064000 4912100 6452200 9089800 16478 632 15015 137853;137854;137855;137856;137857;137858;137859;137860;137861;137862;137863;137864 109723;109724;109725;109726;109727;109728;109729;109730;109731;109732;109733;109734 109727 773 12 FLEQSMDIEDLK Unmodified 1466.6963 0.69629635 632 O95239;Q2VIQ3 KIF4A;KIF4B Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.08 3.33 2 1 9 1 2 1 1 1 1 1 1 1 1 1 79.422 78.145 2 1.5017E-09 96563 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 141.95 128.83 152390000 8993300 96187000 0 0 5408600 5074300 0 3983600 3075400 6092200 4161300 0 3661900 4680100 11072000 16479 632 15015 137865;137866;137867;137868;137869;137870;137871;137872;137873;137874;137875;137876 109735;109736;109737;109738;109739;109740;109741;109742;109743;109744;109745;109746 109737 11 FLEQSMRENK Unmodified 1280.6183 0.6183208 3947 Q96PE2 ARHGEF17 Rho guanine nucleotide exchange factor 17 yes yes 0 0 1 By MS/MS 2 0 1 1 34.989 28.641 3 0.024378 40239 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.762 36.385 5694600 5694600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16480 3947 15016 137877 109747 109747 1 FLESGGQDGAGDDDDLEDLEEAEEPDMEEDDDQK Oxidation (M) 3772.4337 0.43373763 838 P07237 P4HB Protein disulfide-isomerase yes yes 0 1 0 By MS/MS 1 0 1 1 105.95 111.21 3 2.0788E-70 91808 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 109.51 109.51 17053000 17053000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16481 838 15017 137878 109748;109749 109749 1025 2 FLESGGQDGAGDDDDLEDLEEAEEPDMEEDDDQK Unmodified 3756.4388 0.43882301 838 P07237 P4HB Protein disulfide-isomerase yes yes 0 0 0 By MS/MS By MS/MS 1 0 2 1 1 107.09 110.17 3 6.4507E-42 91889 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 89.201 87.559 57337000 22656000 34681000 0 0 0 0 0 0 0 0 0 0 0 0 0 16482 838 15017 137879;137880 109750;109751 109750 2 FLESLPEEEQQR Unmodified 1503.7205 0.72053726 1053 P17480 UBTF Nucleolar transcription factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 2 1 1 1 59.863 60.002 2;3 5.3141E-81 68395 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 198.61 154.3 455720000 0 0 0 31934000 29151000 47072000 27271000 24545000 22489000 37588000 37844000 92343000 36649000 25868000 42962000 16483 1053 15018 137881;137882;137883;137884;137885;137886;137887;137888;137889;137890;137891;137892;137893 109752;109753;109754;109755;109756;109757;109758;109759;109760;109761;109762;109763;109764;109765;109766 109763 14 FLESLPEEEQQRVLGEEK Unmodified 2159.0746 0.074628091 1053 P17480 UBTF Nucleolar transcription factor 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 73.825 73.673 3 6.3938E-54 84814 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 162.4 135.93 419090000 0 0 3088700 10429000 17756000 45161000 17157000 31665000 29939000 52842000 35113000 81655000 19654000 25567000 49060000 16484 1053 15019 137894;137895;137896;137897;137898;137899;137900;137901;137902;137903;137904;137905;137906 109767;109768;109769;109770;109771;109772;109773;109774;109775;109776;109777;109778;109779;109780;109781;109782;109783;109784 109781 18 FLESPDFQPNIAK Unmodified 1504.7562 0.75619449 2442;2275 Q14738;Q13362 PPP2R5D;PPP2R5C Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform;Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 75.9 75.914 2 1.009E-05 88061 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 94.297 48.3 263590000 0 0 0 15267000 15506000 43236000 27316000 24889000 21883000 43575000 43203000 0 0 28711000 0 16485 2442;2275 15020 137907;137908;137909;137910;137911;137912;137913;137914;137915 109785;109786;109787;109788;109789;109790;109791;109792 109791 8 FLESQEFQPSIAK Unmodified 1522.7668 0.76675917 2610 Q16537 PPP2R5E Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.295 71.368 2 3.3018E-09 82166 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 113.93 74.904 85889000 0 0 0 4771400 3074800 10559000 4960600 5929800 3284700 9658700 6641700 10549000 5712300 6709700 14037000 16486 2610 15021 137916;137917;137918;137919;137920;137921;137922;137923;137924;137925;137926;137927 109793;109794;109795;109796;109797;109798;109799;109800;109801;109802;109803 109793 10 FLESTDSFNNELK Unmodified 1542.7202 0.72020291 3714 Q969G3 SMARCE1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 69.566 68.282 2 1.7615E-41 77663 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 173.24 133.93 1014000000 19061000 569050000 10465000 20841000 22681000 37196000 25768000 26531000 24368000 42481000 46350000 45702000 31491000 30070000 61916000 16487 3714 15022 137928;137929;137930;137931;137932;137933;137934;137935;137936;137937;137938;137939;137940;137941;137942;137943 109804;109805;109806;109807;109808;109809;109810;109811;109812;109813;109814;109815;109816;109817;109818;109819;109820;109821;109822;109823;109824;109825;109826 109820 22 FLESVEGNQNYPLLLLTLLEK Unmodified 2432.3203 0.32027809 1754 P55060 CSE1L Exportin-2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 103.65 99.469 3 0.00023252 119408 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 56.529 48.907 2730000 0 2730000 0 0 0 0 0 0 0 0 0 0 0 0 0 16488 1754 15023 137944;137945 109827 109827 1 FLESYATDNEK Unmodified 1315.5932 0.59321148 4267 Q9BZI7 UPF3B Regulator of nonsense transcripts 3B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 44.089 43.438 2 0.00063554 48347 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 78.759 52.316 226810000 0 131920000 0 4589800 6516800 8559500 6354700 6858000 0 9605400 12000000 16017000 8864100 6160500 9360500 16489 4267 15024 137946;137947;137948;137949;137950;137951;137952;137953;137954;137955;137956;137957;137958 109828;109829;109830;109831;109832;109833;109834;109835;109836;109837;109838;109839 109837 12 FLETESHPSIPPPK Unmodified 1577.809 0.80895834 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.72 2 13 1 1 1 2 1 1 1 1 1 1 1 1 1 1 52.907 52.34 3 0.00048983 60555 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 63.76 46.549 281090000 0 26530000 7564200 13497000 14909000 16423000 19852000 23619000 17764000 22700000 23164000 32048000 22668000 17968000 22389000 16490 2556 15025 137959;137960;137961;137962;137963;137964;137965;137966;137967;137968;137969;137970;137971;137972;137973 109840;109841;109842;109843;109844;109845;109846;109847;109848;109849;109850;109851;109852;109853;109854;109855;109856;109857;109858;109859;109860;109861;109862;109863 109860 22 FLEVDER Unmodified 906.4447 0.44469675 3652 Q92696 RABGGTA Geranylgeranyl transferase type-2 subunit alpha yes yes 0 0 0 By MS/MS 10 0 1 1 18.382 18.547 2 0.02139 18811 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 106.76 0 8796500 0 0 0 0 0 0 0 8796500 0 0 0 0 0 0 0 16491 3652 15026 137974 109864 109864 1 FLEVDEYPEHIK Unmodified 1517.7402 0.74021007 3903 Q96K76 USP47 Ubiquitin carboxyl-terminal hydrolase 47 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 2 2 71.449 66.481 2;3 0.00042708 82032 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 93.111 72.24 87939000 28599000 4434500 54905000 0 0 0 0 0 0 0 0 0 0 0 0 16492 3903 15027 137975;137976;137977;137978;137979 109865;109866;109867;109868;109869;109870 109870 6 FLEVDEYPEHIKNLVQK Unmodified 2100.0892 0.089155943 3903 Q96K76 USP47 Ubiquitin carboxyl-terminal hydrolase 47 yes yes 0 0 1 By MS/MS By matching By matching 10 0 3 1 1 1 90.521 90.64 3 0.044515 105379 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 15.635 6.3815 10938000 0 0 0 0 0 0 0 0 0 3586100 0 0 0 1853800 5498600 16493 3903 15028 137980;137981;137982 109871 109871 1 FLEVPRFDK Unmodified 1149.6182 0.61824444 2269 Q13315 ATM Serine-protein kinase ATM yes yes 0 0 1 By MS/MS 2 0 1 1 77.966 69.835 3 0.039302 91838 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.805 12.029 5849100 5849100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16494 2269 15029 137983 109872 109872 1 FLFDSVSSQNVGLR Unmodified 1567.7995 0.79945628 149 O00410 IPO5 Importin-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 82.849 82.909 2 3.5102E-16 96066 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 143.89 130.77 77057000 0 0 0 1376500 2957600 11027000 3357200 6479000 2707100 11618000 7040500 5016600 5642900 0 19835000 16495 149 15030 137984;137985;137986;137987;137988;137989;137990;137991;137992;137993;137994 109873;109874;109875;109876;109877;109878;109879;109880;109881;109882;109883 109873 11 FLFEGQR Unmodified 895.4552 0.45520186 1942 P63165;G2XKQ0 SUMO1 Small ubiquitin-related modifier 1;Small ubiquitin-related modifier yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 54.506 54.641 2 0.050333 60835 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.714 26.127 295110000 0 0 0 15819000 11736000 20492000 20940000 17730000 13574000 21351000 31748000 34901000 22941000 30075000 53798000 16496 1942 15031 137995;137996;137997;137998;137999;138000;138001;138002;138003;138004;138005;138006 109884 109884 1 FLFENQTPAHVYYR Unmodified 1783.8682 0.86820455 244 O15042 U2SURP U2 snRNP-associated SURP motif-containing protein yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 74.167 74.337 3 0.015732 85216 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 30.874 14.735 29652000 0 0 0 0 0 4199000 0 0 3284200 3537600 0 5539700 0 0 13092000 16497 244 15032 138007;138008;138009;138010;138011 109885 109885 1 FLFVDADQIVR Unmodified 1321.703 0.7030367 4751 Q9NYU2 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 86.907 87.03 2 0.001952 100877 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 69.954 20.536 14758000 0 0 0 0 0 3137300 0 2059700 0 2294000 0 0 0 1428500 5838300 16498 4751 15033 138012;138013;138014;138015;138016 109886;109887;109888;109889;109890 109886 4 FLFVDADQIVRTDLK Unmodified 1778.9567 0.95668521 4751 Q9NYU2 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes yes 0 0 1 By MS/MS 2 0 1 1 94.845 86.715 3 0.00042444 112136 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.311 63.566 28908000 28908000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16499 4751 15034 138017 109891 109891 1 FLGALPPAER Unmodified 1069.592 0.59202969 3309 Q8N196 SIX5 Homeobox protein SIX5 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 63.009 62.787 2 0.024932 70814 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 44.753 25.775 17567000 0 0 0 5114500 4608900 0 4848100 0 0 0 0 0 0 2995900 0 16500 3309 15035 138018;138019;138020;138021 109892 109892 1 FLGCVDIK Unmodified 950.48954 0.48953845 5036 Q9UNM6 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes yes 0 0 0 By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 62.327 62.31 2 0.019504 71824 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 63.565 32.847 159460000 0 0 0 11524000 16312000 18256000 5674700 0 5541000 37232000 0 55447000 9473900 0 0 16501 5036 15036 138022;138023;138024;138025;138026;138027;138028;138029 109893 109893 1 FLGDEQDQITFVTR Unmodified 1667.8155 0.81550028 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 79.669 79.647 2 1.2917E-12 91696 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 106.49 82.641 31991000 0 0 0 2446000 0 6095100 0 0 0 0 0 0 0 6607800 16842000 16502 3119 15037 138030;138031;138032;138033 109894;109895;109896 109895 3 FLGDIEVWDQAEK Unmodified 1548.746 0.74602373 1209 P26639 TARS Threonine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.25 3.7 3 2 3 3 1 1 1 1 1 85.519 83.568 2 1.7495E-33 97061 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 170.62 142.6 436090000 350460000 0 39693000 0 0 0 0 0 0 0 6006500 0 0 6294700 33631000 16503 1209 15038 138034;138035;138036;138037;138038;138039;138040;138041 109897;109898;109899;109900;109901;109902;109903;109904 109898 7 FLGDSANLSILSGGTPK Unmodified 1675.8781 0.87810054 1277 P30307 CDC25C M-phase inducer phosphatase 3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 83.542 83.576 2 0.00015442 96838 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 84.506 69.815 13012000 0 0 0 0 1831300 2370700 0 0 0 0 4081600 0 2302600 2426300 0 16504 1277 15039 138042;138043;138044;138045;138046;138047;138048 109905;109906;109907;109908 109905 4 FLGDYVENLNK Unmodified 1310.6507 0.65066678 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 74.191 73.929 2 0.00035377 84321 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 102.06 61.032 26279000 0 0 0 7848400 8018800 0 0 0 0 0 0 0 0 10411000 0 16505 3023 15040 138049;138050;138051;138052 109909;109910;109911;109912 109910 4 FLGETDFAK Unmodified 1026.5022 0.50221163 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.707 58.821 2 0.01612 66338 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 56.81 19.716 175060000 0 0 0 9547500 10205000 10845000 13207000 8514200 10522000 15250000 19527000 20289000 13322000 15419000 28407000 16506 1286 15041 138053;138054;138055;138056;138057;138058;138059;138060;138061;138062;138063;138064 109913;109914;109915;109916;109917;109918;109919;109920 109919 8 FLGLTDTASK Unmodified 1051.555 0.55497548 4717 Q9NX57 RAB20 Ras-related protein Rab-20 yes yes 0 0 0 By MS/MS 10 0 1 1 59.86 60.052 2 0.011018 68827 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 54.982 26.727 4000100 0 0 0 0 0 0 0 0 0 0 0 0 4000100 0 0 16507 4717 15042 138065 109921 109921 1 FLGMHPCER Unmodified 1145.511 0.51101895 5267 Q9Y678 COPG1 Coatomer subunit gamma-1 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.795 39.974 3 0.037173 43438 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 51.445 42.107 158120000 0 0 0 8185700 3829700 15327000 5797200 9734900 8673700 11936000 12226000 18647000 18922000 12889000 31949000 16508 5267 15043 138066;138067;138068;138069;138070;138071;138072;138073;138074;138075;138076;138077 109922 109922 0 FLGSDEEDK Unmodified 1038.4506 0.45056999 4023 Q99567 NUP88 Nuclear pore complex protein Nup88 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 25.414 24.975 2 0.0034522 26485 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 94.302 63.013 277380000 0 63836000 0 10832000 10373000 25938000 12793000 10592000 13579000 19608000 15573000 22803000 20907000 19403000 31146000 16509 4023 15044 138078;138079;138080;138081;138082;138083;138084;138085;138086;138087;138088;138089;138090;138091 109923;109924;109925;109926;109927;109928;109929;109930;109931;109932;109933;109934;109935;109936 109933 14 FLGSDEEDKDSLQELSTEQK Unmodified 2297.0547 0.05468051 4023 Q99567 NUP88 Nuclear pore complex protein Nup88 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 66.442 65.105 3 2.072E-58 82904 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 133.78 106.97 269690000 14384000 31146000 1635500 9629000 9063900 11399000 14019000 26190000 9169800 20449000 22641000 29046000 20742000 20351000 29829000 16510 4023 15045 138092;138093;138094;138095;138096;138097;138098;138099;138100;138101;138102;138103;138104;138105;138106;138107 109937;109938;109939;109940;109941;109942;109943;109944;109945;109946;109947;109948;109949;109950;109951;109952;109953 109940 16 FLGTLSR Unmodified 792.44939 0.4493882 3657 Q92766 RREB1 Ras-responsive element-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 44.377 44.549 2 0.025671 49774 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 80.294 4.3785 211870000 0 0 0 12571000 12797000 14440000 16350000 14432000 10516000 20788000 25170000 20649000 25379000 22778000 15995000 16511 3657 15046 138108;138109;138110;138111;138112;138113;138114;138115;138116;138117;138118;138119 109954;109955;109956;109957;109958 109957 5 FLGTSGQNVSDIFR Unmodified 1539.7682 0.76815616 1556 P49005 POLD2 DNA polymerase delta subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.727 80.787 2 9.4325E-13 93464 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 136.02 78.164 157790000 0 0 0 2595600 6881700 12007000 7426100 11859000 8867400 18336000 15034000 17237000 9113100 13605000 34832000 16512 1556 15047 138120;138121;138122;138123;138124;138125;138126;138127;138128;138129;138130;138131 109959;109960;109961;109962;109963;109964;109965;109966;109967;109968;109969;109970 109960 12 FLGTTCYDR Unmodified 1131.5019 0.50189405 303 O43172 PRPF4 U4/U6 small nuclear ribonucleoprotein Prp4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 42.86 43.228 2 0.0051747 48331 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 81.296 65.094 131360000 0 0 0 0 0 8094100 0 12985000 0 17677000 17877000 21846000 19584000 13333000 19968000 16513 303 15048 138132;138133;138134;138135;138136;138137;138138;138139 109971;109972;109973;109974;109975;109976;109977 109977 7 FLHPEVTETMEK Unmodified 1459.7017 0.70171607 948 P11441 UBL4A Ubiquitin-like protein 4A yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 2 2 1 2 2 1 2 1 2 2 1 52.421 52.463 2;3 0.00042798 58368 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 63.76 56.879 213920000 0 0 0 11583000 12678000 18326000 12324000 25766000 10274000 29205000 24877000 0 23891000 21380000 23622000 16514 948 15049 138140;138141;138142;138143;138144;138145;138146;138147;138148;138149;138150;138151;138152;138153;138154;138155;138156;138157 109978;109979;109980;109981;109982;109983;109984;109985;109986;109987;109988;109989;109990;109991;109992;109993 109986 16 FLHTLDWQEEK Unmodified 1444.6987 0.69867961 234 O14976 GAK Cyclin-G-associated kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 64.539 64.767 3 0.005598 74458 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 51.162 43.437 24116000 0 0 0 0 0 0 0 0 0 0 6002400 0 9069000 9044600 0 16515 234 15050 138158;138159;138160 109994 109994 1 FLIATGERPR Unmodified 1158.6509 0.65094155 2641 Q16881 TXNRD1 Thioredoxin reductase 1, cytoplasmic yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 46.228 46.378 3 0.0024939 51919 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 75.509 53.516 513530000 0 0 0 13332000 9825900 23308000 15615000 20245000 0 0 79460000 85328000 0 37718000 228700000 16516 2641 15051 138161;138162;138163;138164;138165;138166;138167;138168;138169 109995;109996;109997;109998;109999;110000;110001;110002;110003 109998 8 FLICTDVAAR Unmodified 1164.5961 0.59612879 3608 Q92499 DDX1 ATP-dependent RNA helicase DDX1 yes yes 0 0 0 By MS/MS 10 0 1 1 69.631 69.816 2 0.030408 79360 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 57.96 31.358 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16517 3608 15052 138170 110004 110004 1 FLIDGFPR Unmodified 963.5178 0.51780212 1268 P30085 CMPK1 UMP-CMP kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.524 81.586 2 0.0051134 93860 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 134.44 88.555 256160000 0 0 0 7824400 5691900 18526000 11282000 11996000 10524000 14338000 24955000 26586000 9128200 23106000 92199000 16518 1268 15053 138171;138172;138173;138174;138175;138176;138177;138178;138179;138180;138181;138182 110005;110006;110007;110008;110009;110010;110011;110012;110013;110014;110015;110016 110008 12 FLIDNPSEK Unmodified 1061.5393 0.53932542 4818 Q9P2I0 CPSF2 Cleavage and polyadenylation specificity factor subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.35 52.493 2 0.0083679 59061 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 69.825 51.385 175270000 0 0 0 10113000 8859600 12579000 13445000 10235000 7036100 16198000 17956000 21927000 16438000 14407000 26080000 16519 4818 15054 138183;138184;138185;138186;138187;138188;138189;138190;138191;138192;138193;138194 110017;110018;110019;110020;110021;110022;110023;110024;110025;110026;110027 110020 11 FLIIPLGSHPVAK Unmodified 1390.8337 0.83365695 2988 Q6VY07 PACS1 Phosphofurin acidic cluster sorting protein 1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.856 80.916 3 0.0025053 93127 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.373 31.369 44335000 0 0 0 2083200 1245200 5587800 2671300 3716800 2861000 2824300 3030900 2797500 1765500 2447500 13303000 16520 2988 15055 138195;138196;138197;138198;138199;138200;138201;138202;138203;138204;138205;138206 110028;110029;110030;110031;110032 110030 5 FLILGDIDGLMDEFSK Unmodified 1811.9015 0.90153809 1797 P57740 NUP107 Nuclear pore complex protein Nup107 yes yes 0 0 0 By MS/MS 2 0 1 1 102.32 94.187 2 9.1663E-05 121199 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 112.51 96.253 13730000 13730000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16521 1797 15056 138207 110033 110033 1 FLILNPSK Unmodified 930.55385 0.55385327 3040 Q7KZI7 MARK2 Serine/threonine-protein kinase MARK2 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.692 69.769 2 0.01524 79180 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 69.198 43.371 35777000 0 0 0 2900900 2102400 2238800 2914100 2638800 2346900 3808700 2950600 2396900 3678500 2189600 5610800 16522 3040 15057 138208;138209;138210;138211;138212;138213;138214;138215;138216;138217;138218;138219 110034;110035;110036;110037;110038;110039 110038 6 FLILPDMLK Oxidation (M) 1104.6253 0.62530365 1895 P62318 SNRPD3 Small nuclear ribonucleoprotein Sm D3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 84.679 84.771 2 0.0033685 98517 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 83.206 83.206 1203200000 0 0 0 54114000 0 119370000 97228000 77516000 76475000 117730000 117890000 153840000 92639000 85357000 211010000 16523 1895 15058 138220;138221;138222;138223;138224;138225;138226;138227;138228;138229;138230 110040;110041;110042;110043;110044;110045;110046;110047;110048;110049;110050;110051;110052;110053 110049 3068 14 FLILPDMLK Unmodified 1088.6304 0.63038903 1895 P62318 SNRPD3 Small nuclear ribonucleoprotein Sm D3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 92.424 92.498 2 0.0033037 107430 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 93.374 73.587 135320000 0 0 0 1320100 3539500 7118400 4088200 8804700 7192600 14780000 9967400 12219000 4306800 10018000 51967000 16524 1895 15058 138231;138232;138233;138234;138235;138236;138237;138238;138239;138240;138241;138242 110054;110055;110056;110057;110058;110059;110060;110061;110062;110063;110064 110055 11 FLIPNASQAESK Unmodified 1303.6772 0.67721588 1940 P63104 YWHAZ 14-3-3 protein zeta/delta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.41 3.95 1 7 2 12 5 3 2 1 1 1 1 1 1 1 1 1 1 1 1 65.015 64.011 2 3.1012E-08 71452 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 129.85 97.917 29379000000 4151100000 20881000000 801430000 107630000 74740000 117450000 116090000 95387000 59394000 164270000 475770000 454930000 112330000 381590000 1386000000 16525 1940 15059 138243;138244;138245;138246;138247;138248;138249;138250;138251;138252;138253;138254;138255;138256;138257;138258;138259;138260;138261;138262;138263;138264 110065;110066;110067;110068;110069;110070;110071;110072;110073;110074;110075;110076;110077;110078;110079;110080;110081;110082;110083;110084;110085;110086;110087;110088;110089;110090;110091;110092;110093;110094;110095;110096;110097 110096 33 FLIPVLNGLEK Unmodified 1241.7384 0.73835958 3663 Q92797 SYMPK Symplekin yes yes 0 0 0 By matching By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 93.556 93.72 2 0.028876 108694 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.891 35.531 5821000 0 0 0 0 0 0 0 839520 0 1835900 820600 0 0 0 2325000 16526 3663 15060 138265;138266;138267;138268 110098 110098 1 FLIQCDWTMAGQQQGVFK Unmodified 2156.0183 0.018315961 4511 Q9HCD6 TANC2 Protein TANC2 yes yes 0 0 0 By MS/MS 3 0 1 1 89.007 85.796 3 0.046409 102682 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 15.155 0 3627600 0 3627600 0 0 0 0 0 0 0 0 0 0 0 0 0 16527 4511 15061 138269 110099 110099 1 FLIQNVLR Unmodified 1001.6022 0.60220045 1441 P41252 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.679 80.726 2 0.0045204 93187 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 110.36 74.483 228070000 0 0 0 6912200 10642000 36228000 12784000 16985000 15587000 35145000 19665000 37553000 16692000 19874000 0 16528 1441 15062 138270;138271;138272;138273;138274;138275;138276;138277;138278;138279;138280;138281 110100;110101;110102;110103;110104;110105;110106;110107;110108;110109;110110;110111 110106 12 FLITGADQNR Unmodified 1133.5829 0.58292157 2927 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 49.255 49.258 2 0.0052486 54632 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 69.716 27.487 84470000 0 0 0 5455400 5793100 0 11689000 0 0 15444000 0 0 0 25853000 20235000 16529 2927 15063 138282;138283;138284;138285;138286;138287;138288 110112;110113;110114;110115;110116 110115 5 FLITHNPTNATLNK Unmodified 1582.8467 0.84674083 2218;3710 Q12974;Q93096 PTP4A2;PTP4A1 Protein tyrosine phosphatase type IVA 2;Protein tyrosine phosphatase type IVA 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 2 1 2 2 52.832 52.968 2;3 1.6521E-72 58462 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 189.24 142.78 1614300000 0 0 0 97775000 101820000 119320000 158310000 142080000 104700000 131730000 168900000 220250000 89989000 103740000 175650000 16530 2218;3710 15064 138289;138290;138291;138292;138293;138294;138295;138296;138297;138298;138299;138300;138301;138302;138303;138304;138305;138306;138307;138308;138309;138310;138311 110117;110118;110119;110120;110121;110122;110123;110124;110125;110126;110127;110128;110129;110130;110131;110132;110133;110134;110135 110122 19 FLIVAHDDGR Unmodified 1141.588 0.58800695 2626 Q16658 FSCN1 Fascin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 1 1 1 1 1 1 2 1 2 2 2 45.886 46.124 2;3 0.0040351 50969 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 56.359 38.54 422770000 0 0 0 3549000 4292200 5565600 3164400 5363200 3427600 4728700 56670000 52380000 9583300 41004000 233050000 16531 2626 15065 138312;138313;138314;138315;138316;138317;138318;138319;138320;138321;138322;138323;138324;138325;138326;138327 110136;110137;110138;110139;110140;110141;110142;110143;110144;110145;110146;110147;110148 110147 11 FLIWDTAGQER Unmodified 1334.6619 0.66190017 4985;2336 Q9UL26;Q13636 RAB22A;RAB31 Ras-related protein Rab-22A;Ras-related protein Rab-31 no no 0 0 0 By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 80.846 80.952 2 0.0044544 93282 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.173 42.679 39465000 0 0 0 0 1431000 2762700 2873800 3490300 2210000 0 6217500 6567700 0 4382700 9529600 16532 4985;2336 15066 138328;138329;138330;138331;138332;138333;138334;138335;138336 110149;110150;110151;110152 110149 4 FLLADNLYCK Unmodified 1255.6271 0.62709457 1856 P61758 VBP1 Prefoldin subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78.673 77.944 2 0.0015804 89344 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 103.56 80.823 167720000 43763000 0 8674100 0 3684200 9236900 4108300 3393400 3977700 8484500 14805000 17871000 7081700 15372000 27267000 16533 1856 15067 138337;138338;138339;138340;138341;138342;138343;138344;138345;138346;138347;138348;138349;138350 110153;110154;110155;110156;110157;110158;110159;110160;110161;110162;110163;110164;110165 110163 13 FLLDAVFAK Unmodified 1022.5801 0.58006802 3903 Q96K76 USP47 Ubiquitin carboxyl-terminal hydrolase 47 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 89.869 88.616 2 0.012914 102883 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.59 25.782 14855000 7928100 0 0 0 0 1569500 0 0 0 1038200 725750 0 0 744390 2849400 16534 3903 15068 138351;138352;138353;138354;138355;138356 110166;110167 110166 2 FLLDHQGELFPSPDPSGL Unmodified 1967.9629 0.9628928 2146 Q07960 ARHGAP1 Rho GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.83 3.67 3 1 2 1 2 1 1 1 95.096 91.383 2 1.3739E-63 113939 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 162.68 130.36 117820000 14695000 92240000 4956400 0 0 0 0 0 0 0 0 0 0 0 5931500 16535 2146 15069 138357;138358;138359;138360;138361;138362 110168;110169;110170;110171;110172 110169 5 FLLDTNK Unmodified 849.45962 0.45961853 2415 Q14566 MCM6 DNA replication licensing factor MCM6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 41.596 41.778 2 0.031266 45182 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 73.975 5.6625 226860000 0 0 0 14461000 15895000 34765000 19819000 16456000 0 0 27429000 26246000 19184000 17729000 34878000 16536 2415 15070 138363;138364;138365;138366;138367;138368;138369;138370;138371;138372 110173 110173 1 FLLENSVLK Unmodified 1061.6121 0.61209643 3652 Q92696 RABGGTA Geranylgeranyl transferase type-2 subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 78.85 77.574 2 0.0014794 99106 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 136.16 18.986 417710000 204740000 103690000 59031000 3219600 0 6202300 3411800 0 3045100 5462400 6280100 6980200 3840300 4095400 7715300 16537 3652 15071 138373;138374;138375;138376;138377;138378;138379;138380;138381;138382;138383;138384;138385;138386 110174;110175;110176;110177;110178;110179;110180 110177 7 FLLEYIAPMTEK Oxidation (M) 1469.7476 0.74760363 2081 Q02809 PLOD1 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 5 3.56 1 1 1 1 1 1 86.432 84.61 2 0.0023343 97547 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.102 38.639 12569000 0 2328800 4880800 0 0 0 0 0 0 0 0 0 0 0 5359700 16538 2081 15072 138387;138388;138389 110181;110182;110183 110181 3389 3 FLLEYIAPMTEK Unmodified 1453.7527 0.75268901 2081 Q02809 PLOD1 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 yes yes 0 0 0 By MS/MS 2 0 1 1 93.247 90.753 2 0.016331 109904 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 70.1 46.672 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16539 2081 15072 138390 110184 110184 1 FLLGYQPR Unmodified 992.54435 0.54435122 3038 Q7KZ85 SUPT6H Transcription elongation factor SPT6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.316 68.394 2 0.0084735 77582 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.086 69.122 54975000 0 0 0 2525000 2685700 3073300 2576000 2967500 2302700 5170900 5569800 5504600 7025500 6237600 9336200 16540 3038 15073 138391;138392;138393;138394;138395;138396;138397;138398;138399;138400;138401;138402 110185;110186;110187;110188;110189;110190;110191;110192 110188 8 FLLHEPIVNK Unmodified 1208.6917 0.69174374 167 O00541 PES1 Pescadillo homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 1 2 2 2 2 61.916 62.004 2;3 0.00063446 70647 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 97.456 78.213 817120000 0 0 0 55764000 60077000 98068000 57757000 55357000 65745000 88560000 44259000 66866000 80941000 60754000 82970000 16541 167 15074 138403;138404;138405;138406;138407;138408;138409;138410;138411;138412;138413;138414;138415;138416;138417;138418;138419;138420;138421;138422;138423;138424;138425 110193;110194;110195;110196;110197;110198;110199;110200;110201;110202;110203;110204;110205;110206;110207;110208;110209;110210 110206 14 FLLLQQK Unmodified 888.54329 0.54328858 4434 Q9H7D7 WDR26 WD repeat-containing protein 26 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.112 66.199 2 0.03001 75616 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 75.131 11.489 132240000 0 0 0 5538100 5881600 9478200 8149300 7751900 6186300 12356000 12578000 14427000 12876000 13470000 23544000 16542 4434 15075 138426;138427;138428;138429;138430;138431;138432;138433;138434;138435;138436;138437 110211;110212;110213;110214 110211 4 FLLLYATQQGQAK Unmodified 1479.8086 0.80856441 4844 Q9UBK8 MTRR Methionine synthase reductase yes yes 0 0 0 By MS/MS 10 0 1 1 79.242 79.244 2 0.015662 91633 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 67.726 45.039 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16543 4844 15076 138438 110215 110215 1 FLLMLQSVK Oxidation (M) 1093.6206 0.62055263 4226;2895 Q6N069;Q9BXJ9 NAA16;NAA15 N-alpha-acetyltransferase 16, NatA auxiliary subunit;N-alpha-acetyltransferase 15, NatA auxiliary subunit no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 21 2 2 2 2 2 2 2 2 2 1 1 1 79.847 79.894 2 0.0034384 92059 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 79.906 52.769 1672900000 0 0 0 5177600 12443000 18489000 86048000 119660000 123060000 347590000 337350000 617220000 1740700 1092500 3076500 16544 2895;4226 15077 138439;138440;138441;138442;138443;138444;138445;138446;138447;138448;138449;138450;138451;138452;138453;138454;138455;138456;138457;138458;138459 110216;110217;110218;110219;110220;110221;110222;110223;110224;110225;110226;110227;110228 110217 4529 8 FLLMLQSVK Unmodified 1077.6256 0.62563801 4226;2895 Q6N069;Q9BXJ9 NAA16;NAA15 N-alpha-acetyltransferase 16, NatA auxiliary subunit;N-alpha-acetyltransferase 15, NatA auxiliary subunit no no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 84.629 84.776 2 0.0050696 98229 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 84.568 21.853 316520000 0 0 0 0 0 4357000 14659000 32743000 32282000 63463000 63156000 105860000 0 0 0 16545 2895;4226 15077 138460;138461;138462;138463;138464;138465;138466 110229;110230;110231;110232;110233;110234;110235 110235 7 FLLMLQSVKR Oxidation (M) 1249.7217 0.72166366 4226;2895 Q6N069;Q9BXJ9 NAA16;NAA15 N-alpha-acetyltransferase 16, NatA auxiliary subunit;N-alpha-acetyltransferase 15, NatA auxiliary subunit no no 0 1 1 By MS/MS By matching By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 71.17 71.39 3 0.0042404 81507 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.981 28.677 31218000 0 0 0 0 0 0 2189800 2687600 2489000 0 4485800 19366000 0 0 0 16546 2895;4226 15078 138467;138468;138469;138470;138471 110236;110237;110238 110238 4529 1 FLLQEEISK Unmodified 1105.6019 0.60192568 2447 Q14790 CASP8 Caspase-8;Caspase-8 subunit p18;Caspase-8 subunit p10 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.24 2 1 10 2 1 1 1 1 1 1 1 1 1 1 1 70.394 69.933 2 0.017714 85929 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 78.516 53.697 97325000 0 3567700 40723000 0 3116800 7303200 4443600 2900400 4027700 6550800 6018700 5065700 5092000 8515200 0 16547 2447 15079 138472;138473;138474;138475;138476;138477;138478;138479;138480;138481;138482;138483;138484 110239;110240;110241;110242 110242 4 FLLQESQQETTVK Unmodified 1549.7988 0.79878758 3502 Q8TDJ6 DMXL2 DmX-like protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 64.809 58.891 2 6.2166E-07 75386 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.4 77.673 27271000 0 27271000 0 0 0 0 0 0 0 0 0 0 0 0 0 16548 3502 15080 138485 110243 110243 1 FLLQQHLISAR Unmodified 1324.7616 0.76155464 1536 P48382 RFX5 DNA-binding protein RFX5 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 70.147 70.256 3 0.00018161 80485 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 93.258 78.812 66277000 0 0 0 2303700 0 11497000 1834100 6380000 7463400 5008400 0 9199200 4174200 3484100 14933000 16549 1536 15081 138486;138487;138488;138489;138490;138491;138492;138493;138494;138495 110244;110245;110246;110247;110248;110249;110250;110251 110251 8 FLLSLAENK Unmodified 1033.5808 0.5807963 3269 Q8IY22 CMIP C-Maf-inducing protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 76.598 75.967 2 0.0052698 87731 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 78.334 28.295 143680000 37742000 0 0 14963000 16585000 4720700 25723000 0 3693000 7649600 6011400 6722400 3686300 4971400 11217000 16550 3269 15082 138496;138497;138498;138499;138500;138501;138502;138503;138504;138505;138506;138507;138508 110252;110253;110254;110255;110256;110257;110258;110259;110260;110261;110262;110263;110264 110258 13 FLLSLPEHR Unmodified 1110.6186 0.61857879 2471 Q15008 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 73.327 73.451 2 0.0037643 84674 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 96.253 78.217 54029000 0 0 0 0 0 16009000 0 0 0 11423000 0 26598000 0 0 0 16551 2471 15083 138509;138510;138511;138512 110265;110266;110267;110268 110265 4 FLLSLQK Unmodified 847.51674 0.51673948 4254 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.063 72.134 2 0.025135 82140 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.381 29.809 38628000 0 0 0 2643500 2305600 3869700 2473100 2330000 2382600 3237000 3105800 4602000 3501600 3087000 5090200 16552 4254 15084 138513;138514;138515;138516;138517;138518;138519;138520;138521;138522;138523;138524 110269;110270;110271;110272 110270 4 FLLVGQTMPTLLDEDLTK Oxidation (M) 2049.0704 0.070394336 5061 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 0 1 0 By MS/MS 10 0 1 1 91.325 91.463 2 0.00039687 105973 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.143 41.783 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16553 5061 15085 138525 110273 110273 6415 1 FLMANGQLVK Unmodified 1119.6111 0.61105057 1620;1294 P50395;P31150 GDI2;GDI1 Rab GDP dissociation inhibitor beta;Rab GDP dissociation inhibitor alpha no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 4 8 2 1 1 1 1 1 1 1 1 1 1 68.713 66.65 2 0.00202 74932 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.953 61.217 1576100000 821990000 499730000 65530000 7184200 2345600 0 3606400 4489000 0 0 28373000 24898000 0 22051000 95924000 16554 1620;1294 15086 138526;138527;138528;138529;138530;138531;138532;138533;138534;138535;138536;138537 110274;110275;110276;110277;110278;110279;110280;110281;110282 110276 9 FLMANGQLVK Oxidation (M) 1135.606 0.6059652 1620;1294 P50395;P31150 GDI2;GDI1 Rab GDP dissociation inhibitor beta;Rab GDP dissociation inhibitor alpha no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 6.5 3.92 7 1 10 4 2 2 1 1 1 1 1 1 1 1 1 1 54.649 53.118 2 0.0021639 72777 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.21 77.079 1113500000 349960000 552740000 63288000 9091500 2043800 0 5176600 3314600 3870500 4097500 35972000 28663000 0 11582000 43726000 16555 1620;1294 15086 138538;138539;138540;138541;138542;138543;138544;138545;138546;138547;138548;138549;138550;138551;138552;138553;138554;138555 110283;110284;110285;110286;110287;110288;110289;110290;110291;110292;110293;110294;110295;110296;110297;110298 110288 1903 14 FLMECRNSPVTK Unmodified 1480.7167 0.71665463 2311 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 53.71 45.646 3 0.0018767 62638 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.121 30.231 62440000 62440000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16556 2311 15087 138556 110299;110300 110299 2 FLMSLVNQVPK Oxidation (M) 1290.7006 0.70059386 141 O00303 EIF3F Eukaryotic translation initiation factor 3 subunit F yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 2 1 1 1 2 2 2 1 74.86 74.947 2 0.00039581 85377 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 79.906 56.478 62608000 0 0 0 2843000 1577900 0 9248000 2862300 0 0 3219200 17538000 8034900 10287000 6996800 16557 141 15088 138557;138558;138559;138560;138561;138562;138563;138564;138565;138566;138567;138568;138569;138570 110301;110302;110303;110304;110305;110306;110307;110308 110303 191 8 FLMSLVNQVPK Unmodified 1274.7057 0.70567924 141 O00303 EIF3F Eukaryotic translation initiation factor 3 subunit F yes yes 0 0 0 By MS/MS 10 0 1 1 82.881 83.071 2 0.010471 95880 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.676 33.782 5652000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5652000 16558 141 15088 138571 110309 110309 1 FLNAENAQK Unmodified 1033.5193 0.51925868 1480 P43487 RANBP1 Ran-specific GTPase-activating protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.605 24.807 2 0.0036487 26278 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 95.531 53.422 649590000 0 0 0 28289000 14771000 22080000 17990000 19752000 12889000 20726000 75229000 90757000 16350000 86284000 244470000 16559 1480 15089 138572;138573;138574;138575;138576;138577;138578;138579;138580;138581;138582;138583 110310;110311;110312;110313;110314;110315;110316;110317;110318;110319;110320 110314 11 FLNDTTK Unmodified 837.42323 0.42323303 4810 Q9P287 BCCIP BRCA2 and CDKN1A-interacting protein yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 22.626 19.212 2 0.021702 25347 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.11 71.154 187820000 0 182850000 4966200 0 0 0 0 0 0 0 0 0 0 0 0 16560 4810 15090 138584;138585 110321 110321 1 FLNELIK Unmodified 875.51165 0.5116541 4760;4949;4950 Q9NZ52;Q9UJY5;Q9UJY4 GGA3;GGA1;GGA2 ADP-ribosylation factor-binding protein GGA3;ADP-ribosylation factor-binding protein GGA1;ADP-ribosylation factor-binding protein GGA2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.225 70.301 2 0.028147 80911 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 76.847 7.4143 113150000 0 0 0 6098600 5827600 10429000 9257500 8307700 6263700 11058000 8866900 11151000 9689800 8478000 17717000 16561 4760;4950;4949 15091 138586;138587;138588;138589;138590;138591;138592;138593;138594;138595;138596;138597 110322;110323 110322 2 FLNEMIAPVMR 2 Oxidation (M) 1351.6628 0.66282815 4901 Q9UHG3 PCYOX1 Prenylcysteine oxidase 1 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 63.454 62.76 2 0.0039382 72401 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 47.823 33.525 3754000 0 0 0 3754000 0 0 0 0 0 0 0 0 0 0 0 16562 4901 15092 138598;138599;138600;138601 110324;110325;110326;110327 110327 6259;6260 4 FLNEQDLDELVNK Unmodified 1575.7781 0.77805214 4979 Q9UKY1 ZHX1 Zinc fingers and homeoboxes protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 82.806 82.237 2 8.9872E-13 95186 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 152.62 101.34 111580000 6983700 0 0 1713900 7648200 9359300 6413700 5262400 5863200 13465000 10556000 11212000 6111800 8988300 18007000 16563 4979 15093 138602;138603;138604;138605;138606;138607;138608;138609;138610;138611;138612;138613;138614 110328;110329;110330;110331;110332;110333;110334;110335;110336;110337;110338;110339;110340;110341;110342 110331 15 FLNILEK Unmodified 875.51165 0.5116541 2692 Q52LA3 LIN52 Protein lin-52 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 81.023 72.892 2 0.03416 95501 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.265 24.907 30634000 30634000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16564 2692 15094 138615 110343 110343 1 FLNLSSSPSMAVR Unmodified 1407.718 0.71803484 4001 Q96T76 MMS19 MMS19 nucleotide excision repair protein homolog yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 75.754 75.915 2 0.00094183 87051 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.704 26.587 27741000 0 0 0 0 0 7247500 2220900 4486500 0 0 0 0 0 0 13786000 16565 4001 15095 138616;138617;138618;138619;138620 110344;110345;110346;110347 110345 4 FLNPDEVHAILR Unmodified 1422.7619 0.76194857 4398 Q9H4H8 FAM83D Protein FAM83D yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching 10 0 8 1 1 1 1 1 1 1 1 78.099 78.247 3 0.0030827 90382 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 56.225 44.018 45786000 0 0 0 0 0 6863700 2238400 6340200 3721000 7092000 0 3871600 0 4607300 11052000 16566 4398 15096 138621;138622;138623;138624;138625;138626;138627;138628 110348;110349 110348 2 FLNVPMFR Oxidation (M) 1038.5321 0.53207197 237 O14980 XPO1 Exportin-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.998 77.059 2 0.0044693 89032 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 97.071 84.034 101570000 0 0 0 3228100 4152000 14622000 5166400 6265200 4608000 9430600 6663300 9203700 4742800 7171700 26319000 16567 237 15097 138629;138630;138631;138632;138633;138634;138635;138636;138637;138638;138639;138640 110350;110351;110352;110353;110354;110355;110356 110350 316 7 FLNVPMFR Unmodified 1022.5372 0.53715735 237 O14980 XPO1 Exportin-1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 83.716 83.842 2 0.0083495 96712 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.512 86.512 31169000 0 0 0 0 0 6063200 0 0 1703800 3346200 0 0 0 0 20055000 16568 237 15097 138641;138642;138643;138644 110357 110357 1 FLPCTNDK Unmodified 993.45897 0.45896661 2718 Q58WW2 DCAF6 DDB1- and CUL4-associated factor 6 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 33.76 29.182 2 0.01951 38148 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.794 57.456 118880000 0 118880000 0 0 0 0 0 0 0 0 0 0 0 0 0 16569 2718 15098 138645;138646 110358 110358 1 FLPEFPSCSLLK Unmodified 1436.7374 0.7373733 4468 Q9H9A6 LRRC40 Leucine-rich repeat-containing protein 40 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 87.863 87.971 2 0.010187 102442 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 46.819 30.621 46529000 0 0 0 0 2447600 3918700 1715300 2906400 2933900 5844200 3888100 5862800 2001400 3458100 11553000 16570 4468 15099 138647;138648;138649;138650;138651;138652;138653;138654;138655;138656;138657 110359;110360;110361;110362;110363;110364;110365;110366;110367;110368;110369 110367 11 FLPEILALQR Unmodified 1198.7074 0.7073938 2838 Q63HN8 RNF213 E3 ubiquitin-protein ligase RNF213 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 88.193 88.261 2 0.040161 102487 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 40.002 22.093 27525000 0 0 0 2045000 0 2464400 0 0 2735800 3996500 3635100 0 3002100 3219500 6426600 16571 2838 15100 138658;138659;138660;138661;138662;138663;138664;138665 110370 110370 1 FLPGMAIGYSSSK Unmodified 1356.6748 0.67477304 1093 P19623 SRM Spermidine synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS 7.18 3.74 3 1 7 1 2 1 1 1 1 1 1 1 1 76.923 75.314 2 0.00055156 95881 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 117.52 88.144 317200000 142910000 83051000 7730100 0 0 4941300 2258800 0 0 4893400 11510000 11317000 0 9485500 39103000 16572 1093 15101 138666;138667;138668;138669;138670;138671;138672;138673;138674;138675;138676 110371;110372;110373;110374;110375;110376;110377;110378 110375 6 FLPGMAIGYSSSK Oxidation (M) 1372.6697 0.66968766 1093 P19623 SRM Spermidine synthase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 66.229 60.555 2 0.0021975 77783 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.64 58.287 109610000 57892000 44753000 6968500 0 0 0 0 0 0 0 0 0 0 0 0 16573 1093 15101 138677;138678;138679;138680 110379;110380;110381;110382;110383;110384;110385 110379 1566 7 FLPIYNPK Unmodified 990.55385 0.55385327 2295 Q13459 MYO9B Unconventional myosin-IXb no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68.988 67.922 2 0.0105 78236 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 79.454 61.892 117110000 31561000 23266000 3429400 0 4909700 5395400 3276200 4267300 3333300 6308900 4973900 6390500 6250800 4278700 9464500 16574 2295 15102 138681;138682;138683;138684;138685;138686;138687;138688;138689;138690;138691;138692;138693;138694 110386;110387;110388;110389;110390;110391;110392;110393;110394;110395;110396;110397;110398;110399 110399 14 FLPLFDR Unmodified 906.49634 0.49633839 1853 P61604 HSPE1 10 kDa heat shock protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 81.634 81.787 2 0.023354 94099 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.673 60.335 186660000 0 0 0 0 0 3532600 3094200 3624600 2617200 0 25610000 26568000 0 22740000 98872000 16575 1853 15103 138695;138696;138697;138698;138699;138700;138701;138702 110400;110401;110402 110400 3 FLPLNIR Unmodified 871.52797 0.52797287 3111 Q7Z6E9 RBBP6 E3 ubiquitin-protein ligase RBBP6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 75.546 75.728 2 0.02563 86808 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.377 19.372 18851000 0 0 0 0 0 0 0 0 0 5476100 0 0 0 4409600 8964900 16576 3111 15104 138703;138704;138705 110403;110404;110405 110404 3 FLPLTQV Unmodified 816.47454 0.47454032 4142 Q9BTE1 DCTN5 Dynactin subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 87.501 82.377 2 0.02594 102109 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.511 69.441 280110000 18075000 257600000 4435100 0 0 0 0 0 0 0 0 0 0 0 0 16577 4142 15105 138706;138707;138708 110406 110406 1 FLPNAPK Unmodified 785.44357 0.44357454 3608 Q92499 DDX1 ATP-dependent RNA helicase DDX1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 36.497 35.387 2 0.023833 39068 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 84.025 30.503 2378900000 691970000 762320000 62540000 50445000 52021000 63450000 61014000 62222000 55345000 87935000 82045000 110210000 66083000 52929000 118390000 16578 3608 15106 138709;138710;138711;138712;138713;138714;138715;138716;138717;138718;138719;138720;138721;138722;138723;138724 110407;110408;110409;110410;110411;110412;110413;110414;110415;110416;110417;110418 110415 12 FLPPENKPLETAMLK Unmodified 1726.9328 0.93277864 543 O75815 BCAR3 Breast cancer anti-estrogen resistance protein 3 yes yes 0 0 1 By MS/MS 2 0 1 1 80.718 72.587 3 0.00385 95155 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 44.294 32.82 24790000 24790000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16579 543 15107 138725 110419 110419 1 FLPSELRDEH Unmodified 1241.6041 0.60405094 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.11 3.8 6 1 12 2 2 3 1 1 1 1 1 1 1 1 1 1 1 1 50.171 48.231 2;3 0.0036043 52705 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.276 55.467 1401300000 258500000 233400000 215930000 33836000 25500000 86749000 45008000 27962000 36191000 86174000 67889000 79136000 56342000 50257000 98455000 16580 5187 15108 138726;138727;138728;138729;138730;138731;138732;138733;138734;138735;138736;138737;138738;138739;138740;138741;138742;138743;138744 110420;110421;110422;110423;110424;110425;110426;110427;110428;110429;110430;110431;110432;110433;110434;110435;110436;110437 110425 13 FLPSPVVIK Unmodified 998.61645 0.61645353 2330 Q13618 CUL3 Cullin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 75.607 75.659 2 0.029484 87177 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 48.561 48.561 158120000 0 0 0 9607700 6932600 18394000 10918000 10107000 0 15038000 17798000 17362000 9431700 12950000 29584000 16581 2330 15109 138745;138746;138747;138748;138749;138750;138751;138752;138753;138754;138755 110438;110439;110440;110441;110442;110443 110441 6 FLPTGISSK Unmodified 948.52803 0.52803245 297 O43149 ZZEF1 Zinc finger ZZ-type and EF-hand domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 55.497 49.527 2 0.030571 67299 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.351 26.809 103240000 58967000 40258000 4015100 0 0 0 0 0 0 0 0 0 0 0 0 16582 297 15110 138756;138757;138758 110444 110444 1 FLQDYDIR Unmodified 1068.524 0.52400971 2164 Q08AD1 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.284 59.394 2 0.0082209 68665 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 86.953 58.735 99396000 0 0 0 6541100 6764600 8902600 7810600 4925400 6873700 8442800 9657100 17027000 6363200 6207900 9879900 16583 2164 15111 138759;138760;138761;138762;138763;138764;138765;138766;138767;138768;138769;138770 110445;110446;110447;110448;110449;110450;110451;110452;110453;110454;110455;110456;110457;110458;110459;110460 110459 16 FLQDYFDGNLK Unmodified 1358.6507 0.65066678 1270 P30101 PDIA3 Protein disulfide-isomerase A3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80.159 79.725 2 0.0001441 91752 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 126.31 104.23 571610000 392550 55425000 4831500 7834500 11458000 15012000 12885000 17420000 17617000 22722000 55480000 63015000 21599000 41136000 224780000 16584 1270 15112 138771;138772;138773;138774;138775;138776;138777;138778;138779;138780;138781;138782;138783;138784;138785 110461;110462;110463;110464;110465;110466;110467;110468;110469;110470;110471;110472;110473;110474;110475 110465 15 FLQEALTMR Unmodified 1107.5747 0.57466507 2114 Q05397 PTK2 Focal adhesion kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 68.847 68.816 2 0.013982 79147 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 58.981 17.952 28113000 0 0 0 2480000 2484300 3474100 3267800 3533200 2577000 0 5986900 0 4309200 0 0 16585 2114 15113 138786;138787;138788;138789;138790;138791;138792;138793;138794;138795;138796 110476;110477;110478;110479;110480 110476 5 FLQEEAEK Unmodified 992.48148 0.48147619 2501 Q15149 PLEC Plectin yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 25.002 25.209 2 0.0066594 26938 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 98.997 50.493 200200000 0 0 0 27213000 13763000 16658000 17887000 13833000 10415000 0 20313000 25639000 17972000 12975000 23533000 16586 2501 15114 138797;138798;138799;138800;138801;138802;138803;138804;138805;138806;138807;138808 110481;110482;110483;110484;110485;110486;110487;110488;110489 110485 6 FLQEFYQDDELGK Unmodified 1630.7515 0.75150304 1334 P33993 MCM7 DNA replication licensing factor MCM7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 78.652 77.391 2 2.9206E-10 92256 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 140.07 119.77 764930000 67971000 559460000 16861000 0 3806800 15115000 4690000 9299500 8744200 16178000 10488000 12665000 0 7954500 31690000 16587 1334 15115 138809;138810;138811;138812;138813;138814;138815;138816;138817;138818;138819;138820;138821;138822 110490;110491;110492;110493;110494;110495;110496;110497;110498;110499;110500;110501;110502;110503;110504 110495 15 FLQEFYQDDELGKK Unmodified 1758.8465 0.84646606 1334 P33993 MCM7 DNA replication licensing factor MCM7 yes yes 0 0 1 By MS/MS 2 0 1 1 78.289 70.159 3 0.0077605 92289 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.797 34.171 10452000 10452000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16588 1334 15116 138823 110505 110505 0 FLQEHGSDSFLAEHK Unmodified 1743.8216 0.82164829 2043 Q00688 FKBP3 Peptidyl-prolyl cis-trans isomerase FKBP3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 6.21 3.8 4 3 7 3 4 1 1 1 1 1 1 1 54.153 51.245 3;4 2.4768E-59 54804 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 152.34 135.27 341360000 57846000 146730000 0 0 0 12485000 0 6226900 12816000 0 15317000 27492000 0 10850000 51600000 16589 2043 15117 138824;138825;138826;138827;138828;138829;138830;138831;138832;138833;138834;138835;138836;138837 110506;110507;110508;110509;110510;110511;110512;110513;110514;110515;110516 110508 9 FLQESNVLYQHNLR Unmodified 1759.9006 0.90056731 1419 P40763 STAT3 Signal transducer and activator of transcription 3 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 65.748 65.801 3 0.048799 75649 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 19.678 14.136 13227000 0 0 0 0 0 8167700 0 0 0 0 0 0 5058900 0 0 16590 1419 15118 138838;138839 110517 110517 1 FLQFVTGTSK Unmodified 1126.6023 0.60226003 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.47 3.59 3 2 10 2 2 1 1 1 1 1 1 1 1 1 1 1 71.564 69.997 2 0.00092144 79768 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 113.71 70.583 407840000 117780000 62686000 12852000 11920000 15496000 29915000 18793000 17030000 15439000 27201000 27821000 0 24439000 26474000 0 16591 3119 15119 138840;138841;138842;138843;138844;138845;138846;138847;138848;138849;138850;138851;138852;138853;138854 110518;110519;110520;110521;110522;110523;110524;110525;110526;110527;110528;110529;110530;110531;110532;110533 110521 13 FLQLESLQELMK Oxidation (M) 1493.78 0.7799664 3615 Q92538 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 0 1 0 By MS/MS 2 0 1 1 90.562 82.432 2 0.0039087 107004 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.943 30.785 7914800 7914800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16592 3615 15120 138855 110534 110534 5110 1 FLQLESLQELMK Unmodified 1477.7851 0.78505177 3615 Q92538 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 0 0 0 By MS/MS 2 0 1 1 98.14 90.01 2 3.5364E-10 116175 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 125.75 86.599 10907000 10907000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16593 3615 15120 138856 110535 110535 1 FLQLFGTK Unmodified 952.5382 0.53820321 3918 Q96LD4 TRIM47 Tripartite motif-containing protein 47 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 83.958 78.629 2 0.014574 102441 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.531 11.916 13074000 5417500 0 7657000 0 0 0 0 0 0 0 0 0 0 0 0 16594 3918 15121 138857;138858 110536 110536 1 FLQLTPER Unmodified 1002.5498 0.54983053 194 O14618 CCS Copper chaperone for superoxide dismutase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 60.541 60.699 2 0.0069006 69191 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 91.626 39.839 71227000 0 0 0 3815500 0 5602200 4981300 5051700 2919100 7139000 9310200 10016000 0 6755100 15637000 16595 194 15122 138859;138860;138861;138862;138863;138864;138865;138866;138867;138868 110537;110538;110539;110540;110541;110542;110543;110544;110545;110546 110540 9 FLQNTEGIEPTVK Unmodified 1474.7668 0.76675917 4740 Q9NYC9 DNAH9 Dynein heavy chain 9, axonemal yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 57.295 57.211 2 0.0077431 65737 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 45.161 17.857 64000000 0 0 0 0 22988000 0 22284000 0 18728000 0 0 0 0 0 0 16596 4740 15123 138869;138870;138871 110547 110547 1 FLQQALDR Unmodified 989.52943 0.52942943 5074 Q9UQR1 ZNF148 Zinc finger protein 148 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 47.198 47.475 2 0.0043522 53418 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 111.01 38.869 292530000 0 0 0 26810000 0 0 0 26280000 0 40537000 41923000 39572000 37754000 28777000 50882000 16597 5074 15124 138872;138873;138874;138875;138876;138877;138878;138879 110548;110549;110550;110551 110549 4 FLQQEQSVFR Unmodified 1280.6513 0.65133548 4641 Q9NU22 MDN1 Midasin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 60.401 60.59 2 0.0087229 69731 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 59.35 48.128 13381000 0 0 0 0 2732200 0 0 0 0 0 0 5368300 0 0 5280800 16598 4641 15125 138880;138881;138882 110552;110553 110553 2 FLQQKIYTYAGSILVAINPFKFLPIYNPK Unmodified 3385.8842 0.88424254 2295 Q13459 MYO9B Unconventional myosin-IXb yes yes 0 0 2 By MS/MS 2 0 1 1 100.39 97.987 5 0.042759 118371 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 11.922 10.198 762660 0 0 762660 0 0 0 0 0 0 0 0 0 0 0 0 16599 2295 15126 138883 110554 110554 1 FLQVHASSGHK Unmodified 1209.6255 0.62545508 4119 Q9BRX2 PELO Protein pelota homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 19.634 19.112 3 0.0052031 19703 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 52.167 43.932 98745000 37030000 0 0 0 0 14628000 0 6727500 0 10731000 9499000 0 11131000 8998700 0 16600 4119 15127 138884;138885;138886;138887;138888;138889;138890 110555;110556;110557;110558 110555 2 FLRASEEHLK Unmodified 1228.6564 0.65642086 1138 P22392 NME2 Nucleoside diphosphate kinase B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS 5.73 3.93 1 3 2 5 3 2 1 1 1 1 1 1 36.94 35.39 3 0.0015783 40971 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.342 67.384 961720000 796270000 121400000 6523300 0 0 0 9652100 7966700 0 3019500 3660900 13227000 0 0 0 16601 1138 15128 138891;138892;138893;138894;138895;138896;138897;138898;138899;138900;138901 110559;110560;110561;110562;110563;110564 110563 5 FLRENPYYDSR Unmodified 1458.6892 0.68917755 2040 Q00610 CLTC Clathrin heavy chain 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 1 1 2 1 1 1 2 42.314 42.551 2;3 0.00022073 47300 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 108.35 101.87 669950000 0 0 0 22036000 15381000 49445000 22925000 24201000 24404000 50208000 83658000 75473000 56040000 63993000 182180000 16602 2040 15129 138902;138903;138904;138905;138906;138907;138908;138909;138910;138911;138912;138913;138914;138915 110565;110566;110567;110568;110569;110570;110571;110572;110573 110568 5 FLSAEAIGIMR Oxidation (M) 1222.638 0.63799361 2603 Q16512 PKN1 Serine/threonine-protein kinase N1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.031 72.1 2 0.0030988 83764 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 60.828 41.042 45652000 0 0 0 2373800 3368700 6297600 4191500 2116200 3402300 4967500 4284100 4635300 3187500 1965700 4861400 16603 2603 15130 138916;138917;138918;138919;138920;138921;138922;138923;138924;138925;138926;138927 110574;110575;110576;110577;110578 110576 4242 5 FLSAEEYQQK Unmodified 1241.5928 0.59281755 3907 Q96KG9 SCYL1 N-terminal kinase-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42.293 41.663 2 4.1523E-11 46551 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 158.07 128.9 362610000 0 176460000 4135700 12840000 0 24784000 17417000 0 14598000 0 26643000 24394000 20568000 17217000 23551000 16604 3907 15131 138928;138929;138930;138931;138932;138933;138934;138935;138936;138937;138938;138939;138940;138941 110579;110580;110581;110582;110583;110584;110585;110586;110587;110588;110589;110590;110591;110592;110593 110581 15 FLSAIVSSVDK Unmodified 1164.639 0.63903946 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.29 3.67 4 2 11 2 3 1 1 1 1 1 1 1 1 1 1 1 1 76.369 74.986 2 3.3259E-05 85803 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 117.7 104.87 3932800000 1641800000 793260000 144510000 59241000 98900000 171600000 91546000 87741000 88965000 211920000 121890000 0 110550000 92733000 218170000 16605 1518 15132 138942;138943;138944;138945;138946;138947;138948;138949;138950;138951;138952;138953;138954;138955;138956;138957;138958 110594;110595;110596;110597;110598;110599;110600;110601;110602;110603;110604;110605;110606;110607;110608;110609;110610;110611;110612 110601 14 FLSAVLAAQK Unmodified 1046.6124 0.61243078 2066 Q01968 OCRL Inositol polyphosphate 5-phosphatase OCRL-1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 65.827 66.111 2 0.0037884 75809 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 75.213 48.251 15246000 0 0 0 0 0 0 3354000 1586000 0 2421200 0 3310700 0 0 4573700 16606 2066 15133 138959;138960;138961;138962;138963;138964 110613;110614;110615;110616;110617 110615 5 FLSDEENLK Unmodified 1093.5292 0.52915466 2095 Q03393 PTS 6-pyruvoyl tetrahydrobiopterin synthase yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 47.761 41.679 2 0.01196 57143 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.498 30.293 225430000 4922100 220500000 0 0 0 0 0 0 0 0 0 0 0 0 0 16607 2095 15134 138965;138966;138967 110618;110619;110620 110620 3 FLSDPQVHTVLVER Unmodified 1638.873 0.87295558 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.67 1.6 1 23 1 2 1 2 2 2 2 2 2 2 2 2 2 69.165 68.926 2;3 0.00024756 91060 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.669 63.314 706960000 24311000 0 0 23283000 22737000 70725000 36852000 47922000 47027000 69937000 59752000 93779000 48588000 54769000 107280000 16608 2392 15135 138968;138969;138970;138971;138972;138973;138974;138975;138976;138977;138978;138979;138980;138981;138982;138983;138984;138985;138986;138987;138988;138989;138990;138991 110621;110622;110623;110624;110625;110626;110627;110628;110629;110630;110631 110625 11 FLSEMLK Unmodified 866.45718 0.45717569 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 63.913 64 2 0.024118 73904 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 99.919 43.409 498310000 0 0 0 82396000 24023000 31360000 0 128660000 20626000 31012000 37622000 57558000 39843000 19356000 25858000 16609 1029 15136 138992;138993;138994;138995;138996;138997;138998;138999;139000;139001;139002 110632;110633;110634;110635 110635 4 FLSEMLK Oxidation (M) 882.45209 0.45209032 1029 P15924 DSP Desmoplakin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 43.7 43.898 2 0.015731 49035 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 94.163 47.118 474080000 0 0 0 0 29566000 0 35060000 176210000 19817000 39197000 44670000 64904000 64647000 0 0 16610 1029 15136 139003;139004;139005;139006;139007;139008;139009;139010 110636;110637;110638 110637 1431 3 FLSEVFAQLTDEATDDDK Unmodified 2042.932 0.93204618 2748 Q5MIZ7 SMEK2 Serine/threonine-protein phosphatase 4 regulatory subunit 3B yes yes 0 0 0 By MS/MS By MS/MS 3 0 2 1 1 96.201 92.81 2 0.0072553 95943 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 43.382 37.657 2811900 1110000 1702000 0 0 0 0 0 0 0 0 0 0 0 0 0 16611 2748 15137 139011;139012 110639 110639 1 FLSGLELVK Unmodified 1004.5906 0.59063271 3982 Q96S44 TP53RK TP53-regulating kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.967 80.026 2 0.011037 92079 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.419 31.483 46553000 0 0 0 1561900 2173700 4938300 3417400 3664800 2857900 5687900 4307700 4437200 2280400 2786700 8438900 16612 3982 15138 139013;139014;139015;139016;139017;139018;139019;139020;139021;139022;139023;139024 110640 110640 1 FLSHSTDSLNK Unmodified 1247.6146 0.61461563 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS 5.64 3.98 6 5 2 2 2 1 1 1 1 1 31.016 28.209 2;3 3.1114E-08 39996 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 182.16 182.16 327960000 206810000 69109000 34529000 3196800 0 3423300 4447100 0 0 0 6445600 0 0 0 0 16613 2193 15139 139025;139026;139027;139028;139029;139030;139031;139032;139033;139034;139035 110641;110642;110643;110644;110645 110644 3 FLSLANK Unmodified 791.45414 0.45413923 5021 Q9UMY1 NOL7 Nucleolar protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 46.713 46.891 2 0.021124 53321 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 107.22 4.4159 272580000 0 0 0 21845000 0 28310000 31033000 0 22591000 36655000 37816000 0 32757000 21411000 40157000 16614 5021 15140 139036;139037;139038;139039;139040;139041;139042;139043;139044 110646;110647 110646 2 FLSLPDTWMK Unmodified 1236.6213 0.62128091 4943 Q9UJX2 CDC23 Cell division cycle protein 23 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 92.408 88.116 2 0.0023503 111123 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.26 88.455 24304000 10050000 10583000 0 0 0 0 0 0 0 0 0 0 0 0 3670700 16615 4943 15141 139045;139046;139047 110648;110649;110650;110651 110648 4 FLSNGHVTIPGQQDK Unmodified 1639.8318 0.83181904 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 1 3 1 1 2 2 2 2 1 2 1 53.745 53.914 2;3 9.2629E-23 60914 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 152.38 127.16 3633300000 0 0 0 243680000 305640000 351410000 304910000 268060000 204720000 363650000 314720000 454660000 310560000 211710000 299570000 16616 1356 15142 139048;139049;139050;139051;139052;139053;139054;139055;139056;139057;139058;139059;139060;139061;139062;139063;139064;139065;139066 110652;110653;110654;110655;110656;110657;110658;110659;110660;110661;110662;110663;110664;110665;110666;110667;110668;110669;110670;110671;110672;110673;110674;110675;110676;110677;110678;110679;110680;110681;110682;110683 110654 32 FLSPQDTFEALK Unmodified 1394.7082 0.70818166 4639 Q9NTZ6 RBM12 RNA-binding protein 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 83.48 82.833 2 3.2632E-16 102906 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 152.97 125.23 1100500000 0 736610000 28889000 7057600 12817000 25024000 14429000 21468000 15935000 24692000 19682000 25965000 27739000 40466000 99751000 16617 4639 15143 139067;139068;139069;139070;139071;139072;139073;139074;139075;139076;139077;139078;139079;139080;139081 110684;110685;110686;110687;110688;110689;110690;110691;110692;110693;110694;110695;110696;110697 110688 14 FLSPQDTFEALKR Unmodified 1550.8093 0.80929269 4639 Q9NTZ6 RBM12 RNA-binding protein 12 yes yes 0 0 1 By MS/MS 10 0 1 1 78.238 78.484 3 0.015403 90274 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.563 30.136 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16618 4639 15144 139082 110698 110698 1 FLSPVVPNYDNVHPNYHK Unmodified 2139.0538 0.05377349 5084 Q9Y262 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 70.228 69.601 3;4 0.00020652 92001 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.159 54.439 167810000 114250000 0 0 0 0 5311500 0 2972000 3223500 3990400 3736600 9298800 3691100 3945500 17381000 16619 5084 15145 139083;139084;139085;139086;139087;139088;139089;139090;139091;139092 110699;110700;110701;110702 110700 3 FLSQESGVAQTLK Unmodified 1406.7405 0.74054442 3319 Q8N392 ARHGAP18 Rho GTPase-activating protein 18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 57.68 57.669 2 0.00066419 64625 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.549 68.478 61779000 0 0 0 6675100 8590300 0 0 6674900 0 14179000 0 0 0 10621000 15038000 16620 3319 15146 139093;139094;139095;139096;139097;139098;139099;139100;139101;139102 110703;110704;110705;110706;110707;110708;110709;110710;110711;110712 110706 10 FLSQLIQK Unmodified 975.57532 0.57531699 393 O60306 AQR Intron-binding protein aquarius yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 65.324 65.467 2 0.01661 75035 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 66.993 8.8259 31468000 0 0 0 2412300 0 0 0 3244800 2037400 0 0 5325800 4182600 5280100 8985000 16621 393 15147 139103;139104;139105;139106;139107;139108;139109 110713;110714 110714 2 FLSQLLER Unmodified 1004.5655 0.56548059 3693 Q92974 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.229 75.288 2 0.0057994 86881 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 126.28 77.774 266260000 0 0 0 6390900 10406000 19263000 19129000 21105000 15280000 31421000 23936000 36789000 18507000 16762000 47270000 16622 3693 15148 139110;139111;139112;139113;139114;139115;139116;139117;139118;139119;139120;139121 110715;110716;110717;110718;110719;110720;110721;110722;110723 110719 2 FLSREDQVILR Unmodified 1374.7619 0.76194857 4424 Q9H6T0 ESRP2 Epithelial splicing regulatory protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.729 58.841 3 0.00070713 66906 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 75.416 42.416 91617000 0 0 0 4049900 2466300 6467800 5934500 8720900 6777800 7162100 6925000 9837100 6473200 7024200 19779000 16623 4424 15149 139122;139123;139124;139125;139126;139127;139128;139129;139130;139131;139132;139133 110724;110725;110726;110727;110728 110726 4 FLSSAAAVSK Unmodified 979.53385 0.53384611 1224 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.744 36.875 2 0.0081592 40914 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 60.717 35.267 211780000 0 0 0 13172000 14184000 22458000 17263000 16038000 11051000 20654000 21572000 29240000 22421000 23730000 0 16624 1224 15150 139134;139135;139136;139137;139138;139139;139140;139141;139142;139143;139144;139145 110729;110730;110731;110732;110733 110729 5 FLSSSEVDSPNVLTVQK Unmodified 1848.9469 0.94690838 485 O75362 ZNF217 Zinc finger protein 217 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 74.879 74.933 2 9.6802E-25 86419 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 134.99 109.05 76897000 0 0 0 4378300 5267100 7669200 4634000 6608900 0 8509800 9246000 9186700 6319700 6712100 8365500 16625 485 15151 139146;139147;139148;139149;139150;139151;139152;139153;139154;139155;139156 110734;110735;110736;110737;110738;110739;110740;110741;110742;110743;110744 110735 11 FLSTEAISIMR Oxidation (M) 1282.6591 0.65912298 2604 Q16513 PKN2 Serine/threonine-protein kinase N2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 70.266 70.402 2 0.0017856 81013 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.435 36.625 52196000 0 0 0 0 4543600 9762100 0 3245300 7429800 0 6331000 8302800 3286100 0 9295700 16626 2604 15152 139157;139158;139159;139160;139161;139162;139163;139164;139165 110745;110746;110747;110748;110749;110750;110751;110752;110753;110754;110755;110756;110757 110746 4244 13 FLSTEAISIMR Unmodified 1266.6642 0.66420836 2604 Q16513 PKN2 Serine/threonine-protein kinase N2 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 80.511 80.636 2 0.0068717 92864 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 55.461 30.567 10734000 0 0 0 0 0 5362800 0 1758500 3612600 0 0 0 0 0 0 16627 2604 15152 139166;139167;139168 110758;110759 110758 2 FLSVETPENDSQLSNISCSFQVSSK Unmodified 2802.3018 0.30180385 2264 Q13287 NMI N-myc-interactor yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 87.704 84.197 3 3.3452E-120 104389 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.34 115.85 98002000 0 96063000 1939100 0 0 0 0 0 0 0 0 0 0 0 0 16628 2264 15153 139169;139170;139171 110760;110761;110762;110763 110760 4 FLSVLERQ Unmodified 990.54983 0.54983053 834 P07099 EPHX1 Epoxide hydrolase 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.292 64.383 2 0.047251 73602 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 100.39 31.475 120550000 0 0 0 5837000 7253400 10030000 7311200 6294600 9152200 11308000 13566000 18232000 8737600 9720300 13103000 16629 834 15154 139172;139173;139174;139175;139176;139177;139178;139179;139180;139181;139182;139183 110764 110764 0 FLTAISVVK Unmodified 976.59572 0.59571809 3021 Q6ZW49 PAXIP1 PAX-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 75.118 74.373 2 0.011616 85393 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 62.546 28.996 97758000 19179000 0 3459400 3258300 0 3895000 5617900 6491700 4310500 10578000 8151000 8334600 6074800 8054800 10353000 16630 3021 15155 139184;139185;139186;139187;139188;139189;139190;139191;139192;139193;139194;139195;139196 110765;110766;110767;110768;110769;110770;110771;110772 110768 8 FLTALGNEK Unmodified 991.53385 0.53384611 4254 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 51.72 51.587 2 0.019448 58655 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 53.968 14.715 32499000 0 0 0 0 10672000 12104000 9722900 0 0 0 0 0 0 0 0 16631 4254 15156 139197;139198;139199 110773;110774 110774 2 FLTASQDK Unmodified 908.46035 0.46034682 3384 Q8NB16 MLKL Mixed lineage kinase domain-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.466 21.671 2 0.0099634 22372 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 81.191 57.004 175240000 0 0 0 7838700 8175800 14623000 12345000 11721000 9982800 20665000 23752000 26886000 13695000 10979000 14576000 16632 3384 15157 139200;139201;139202;139203;139204;139205;139206;139207;139208;139209;139210;139211 110775;110776;110777;110778;110779;110780;110781;110782;110783;110784 110776 10 FLTDLFAQLTDEATDEEK Unmodified 2084.979 0.97899637 2888 Q6IN85 SMEK1 Serine/threonine-protein phosphatase 4 regulatory subunit 3A yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 2 2 2 2 99.296 94.366 2;3 6.5363E-53 117652 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 175.28 153.62 43232000 27901000 15331000 0 0 0 0 0 0 0 0 0 0 0 0 0 16633 2888 15158 139212;139213;139214;139215 110785;110786;110787;110788 110786 4 FLTDYLNDLQGR Unmodified 1453.7201 0.72014333 2989 Q6W2J9 BCOR BCL-6 corepressor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 85.112 85.239 2 2.9143E-05 98442 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.048 69.321 21581000 0 0 0 0 0 3465100 0 0 0 3216400 2392400 3341600 0 2802000 6363500 16634 2989 15159 139216;139217;139218;139219;139220;139221 110789;110790;110791;110792;110793;110794 110791 5 FLTEVLLPIVK Unmodified 1270.7901 0.7900608 4998 Q9ULK4 MED23 Mediator of RNA polymerase II transcription subunit 23 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 94.484 94.617 2 0.029474 109713 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.022 28.312 1312000 0 0 0 0 0 0 0 0 0 392240 0 0 0 0 919720 16635 4998 15160 139222;139223 110795 110795 1 FLTGPLNLNDPDAK Unmodified 1513.7777 0.77765821 2020 P86791;P86790 CCZ1;CCZ1B Vacuolar fusion protein CCZ1 homolog;Vacuolar fusion protein CCZ1 homolog B yes no 0 0 0 By MS/MS 10 0 1 1 79.422 78.97 2 0.011236 91689 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 39.58 27.03 2654700 0 0 0 2654700 0 0 0 0 0 0 0 0 0 0 0 16636 2020 15161 139224 110796 110796 1 FLTGYEVK Unmodified 955.50148 0.50148335 3468 Q8NI60 ADCK3 Atypical kinase ADCK3, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 52.129 52.722 2 0.013245 58690 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.789 46.963 66222000 0 0 0 0 0 0 0 0 0 0 29360000 20453000 0 0 16409000 16637 3468 15162 139225;139226;139227 110797;110798 110797 2 FLTLPDSLGR Unmodified 1117.6132 0.61315906 3780 Q96CN9 GCC1 GRIP and coiled-coil domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 80.718 80.658 2 0.049584 93630 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 59.245 42.469 7580600 0 0 0 1458300 0 0 0 0 0 0 0 3883100 2239200 0 0 16638 3780 15163 139228;139229;139230 110799 110799 0 FLTNGPSSSPGQER Unmodified 1475.7005 0.70047052 3090 Q7Z406 MYH14 Myosin-14 yes yes 0 0 0 By MS/MS 10 0 1 1 37.368 36.899 2 0.0011852 41383 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 60.434 43.493 2394400 0 0 0 2394400 0 0 0 0 0 0 0 0 0 0 0 16639 3090 15164 139231 110800 110800 1 FLTPIYHPNIDSAGR Unmodified 1699.8682 0.86820455 4547 Q9NPD8 UBE2T Ubiquitin-conjugating enzyme E2 T yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 72.381 72.562 3 0.00060142 84000 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 55.186 48.457 126100000 0 0 0 0 0 23189000 9511600 12577000 3675400 15021000 11249000 10554000 7768800 7202700 25348000 16640 4547 15165 139232;139233;139234;139235;139236;139237;139238;139239;139240;139241 110801;110802;110803;110804;110805;110806;110807;110808;110809;110810;110811;110812 110811 12 FLTQPQVVAR Unmodified 1157.6557 0.65569258 363 O43760 SYNGR2 Synaptogyrin-2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 54.061 54.379 2 0.0064586 61161 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 81.191 63.205 45011000 0 0 0 0 0 0 4034800 5124600 3269400 9005800 4609900 7704500 4767600 0 6494400 16641 363 15166 139242;139243;139244;139245;139246;139247;139248;139249 110813;110814;110815;110816 110816 4 FLTVMMK 2 Oxidation (M) 900.4449 0.44489645 1878 P62244 RPS15A 40S ribosomal protein S15a yes yes 0 2 0 By MS/MS By MS/MS By matching By matching By matching 10 0 5 1 1 1 1 1 37.513 37.556 2 0.039803 41724 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 40.852 17.815 24367000 0 0 0 0 2637500 0 4428100 6477000 3495500 0 0 0 7329200 0 0 16642 1878 15167 139250;139251;139252;139253;139254 110817 110817 1 FLTVMMK Oxidation (M) 884.44998 0.44998183 1878 P62244 RPS15A 40S ribosomal protein S15a yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 56.121 56.332 2 0.032192 63052 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 64.776 32.306 25244000 0 0 0 0 0 0 2102000 6490700 1497100 0 5131300 0 6213300 3809200 0 16643 1878 15167 139255;139256;139257;139258;139259;139260 110818 110818 1 FLTYFPGR Unmodified 999.5178 0.51780212 1118;5069 P21127;Q9UQ88 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A no no 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 73.261 73.419 2 0.02755 84255 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 57.281 36.761 9752500 0 0 0 0 0 0 4093300 0 5659200 0 0 0 0 0 0 16644 1118;5069 15168 139261;139262 110819 110819 1 FLVALISR Unmodified 917.56984 0.56983769 5102 Q9Y2H2 INPP5F Phosphatidylinositide phosphatase SAC2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 81.06 81.194 2 0.017693 94028 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 65.252 26.46 12757000 0 0 0 0 0 3172000 0 3262000 2709200 0 0 3613900 0 0 0 16645 5102 15169 139263;139264;139265;139266 110820 110820 1 FLVDQGYSFK Unmodified 1202.5972 0.59717465 1089 P19447 ERCC3 TFIIH basal transcription factor complex helicase XPB subunit yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 73.042 73.126 2 0.010083 84262 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 56.632 26.823 33464000 0 0 0 2662000 0 0 2667700 3674000 0 5787300 3904500 6294100 4255300 4219100 0 16646 1089 15170 139267;139268;139269;139270;139271;139272;139273;139274 110821;110822;110823;110824 110821 4 FLVEDYCFADLAPQK Unmodified 1814.8549 0.85492225 1556 P49005 POLD2 DNA polymerase delta subunit 2 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 87.631 87.809 2 0.0017686 101644 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.5 59.18 4215600 0 0 0 0 0 0 0 0 0 0 864920 0 0 0 3350700 16647 1556 15171 139275;139276 110825 110825 1 FLVFVANFDENDPK Unmodified 1653.8039 0.80387296 1294 P31150 GDI1 Rab GDP dissociation inhibitor alpha yes yes 0 0 0 By MS/MS By MS/MS 2.67 0.471 1 2 2 1 93.377 88.419 2 0.00081981 112031 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.951 56.142 62504000 61309000 1196000 0 0 0 0 0 0 0 0 0 0 0 0 0 16648 1294 15172 139277;139278;139279 110826;110827;110828 110828 3 FLVGFTNK Unmodified 924.5069 0.50690308 1476 P43307 SSR1 Translocon-associated protein subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.405 66.49 2 0.0082674 76245 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 86.794 32.257 437280000 0 0 0 42301000 26723000 35066000 34091000 32859000 27758000 33301000 38518000 56469000 37112000 31119000 41961000 16649 1476 15173 139280;139281;139282;139283;139284;139285;139286;139287;139288;139289;139290;139291 110829;110830;110831;110832;110833;110834;110835;110836;110837;110838;110839;110840 110829 9 FLVHNVK Unmodified 855.49667 0.49667274 1928 P62910 RPL32 60S ribosomal protein L32 yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 35.502 29.91 2 0.03102 41935 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.939 34.684 163310000 148360000 14951000 0 0 0 0 0 0 0 0 0 0 0 0 0 16650 1928 15174 139292;139293 110841;110842 110842 2 FLVIGNAGTGK Unmodified 1075.6026 0.60259438 1103 P20338 RAB4A Ras-related protein Rab-4A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 61.817 60.479 2 1.0563E-06 74994 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 123.86 67.313 465420000 88113000 25275000 13240000 13140000 14257000 20259000 20493000 28052000 18711000 32649000 38960000 49418000 26976000 25472000 50407000 16651 1103 15175 139294;139295;139296;139297;139298;139299;139300;139301;139302;139303;139304;139305;139306;139307;139308;139309 110843;110844;110845;110846;110847;110848;110849;110850;110851;110852;110853;110854;110855;110856;110857;110858;110859 110854 16 FLVIGSAGTGK Unmodified 1048.5917 0.59169534 1827 P61018 RAB4B Ras-related protein Rab-4B yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 60.181 60.562 2 0.022471 68175 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.876 13.453 7386300 0 0 0 0 0 0 0 2767200 0 0 0 0 0 0 4619200 16652 1827 15176 139310;139311 110860 110860 1 FLVLNYK Unmodified 895.51674 0.51673948 3369 Q8N8N7 PTGR2 Prostaglandin reductase 2 yes yes 0 0 0 By MS/MS 10 0 1 1 70.349 70.784 2 0.04788 80693 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.263 33.327 3806200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3806200 16653 3369 15177 139312 110861 110861 1 FLVPDHVNMSELIK Unmodified 1640.8596 0.8596137 21 Q9GZQ8;A6NCE7 MAP1LC3B;MAP1LC3B2 Microtubule-associated proteins 1A/1B light chain 3B;Microtubule-associated proteins 1A/1B light chain 3 beta 2 yes no 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 91.746 85.225 3 0.00045123 108268 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.622 51.564 45748000 21147000 24602000 0 0 0 0 0 0 0 0 0 0 0 0 0 16654 21 15178 139313;139314 110862;110863 110863 2 FLVPLEQSPVLEQSTLQHNNQTR Unmodified 2677.3824 0.38237785 4865 Q9UBZ4 APEX2 DNA-(apurinic or apyrimidinic site) lyase 2 yes yes 0 0 0 By MS/MS 10 0 1 1 83.607 83.797 3 0.00044163 96693 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.256 32.729 10321000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10321000 16655 4865 15179 139315 110864 110864 1 FLVQNIHTLAELK Unmodified 1524.8664 0.86641364 3504 Q8TDN6 BRIX1 Ribosome biogenesis protein BRX1 homolog yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 79.828 79.992 3 0.0017007 92132 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.52 48.699 10180000 0 0 0 0 0 0 0 0 0 2463800 0 0 0 0 7716000 16656 3504 15180 139316;139317 110865 110865 1 FLVSMPSK Unmodified 907.48372 0.48372479 3379 Q8N9N8 EIF1AD Probable RNA-binding protein EIF1AD yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 63.229 63.362 2 0.038354 72427 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 51.059 16.167 41113000 0 0 0 0 4198700 0 5228100 0 0 5998100 8715100 6560400 4704900 5707900 0 16657 3379 15181 139318;139319;139320;139321;139322;139323;139324 110866 110866 1 FLVTAPGIIR Unmodified 1085.6597 0.65971533 2995 Q6YHK3 CD109 CD109 antigen yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 80.323 80.363 2 0.027961 93042 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 43.808 27.664 14245000 0 0 0 0 1210900 2078900 0 0 0 0 0 4273500 1916000 0 4765900 16658 2995 15182 139325;139326;139327;139328;139329 110867;110868 110868 2 FLVTLAQK Unmodified 918.55385 0.55385327 5061 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching 9 2.65 1 7 1 1 1 1 1 1 1 1 66.104 65.064 2 0.012214 87330 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 106.42 53.779 54546000 35617000 0 0 714280 1894200 2480300 0 0 0 2878200 0 0 2124200 3098700 5738700 16659 5061 15183 139330;139331;139332;139333;139334;139335;139336;139337 110869;110870 110869 2 FLVYVANFDEK Unmodified 1343.6762 0.67615325 1620 P50395 GDI2 Rab GDP dissociation inhibitor beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 83.568 82.373 2 0.00027978 104109 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 109.66 95.894 548190000 265360000 81223000 63250000 2665400 2077900 4043500 3665600 4390100 4928700 4820800 11536000 13465000 0 10296000 76465000 16660 1620 15184 139338;139339;139340;139341;139342;139343;139344;139345;139346;139347;139348;139349;139350;139351;139352 110871;110872;110873;110874;110875;110876;110877;110878;110879;110880;110881;110882;110883;110884;110885;110886;110887 110879 17 FLYEELGLDSTSVFEDLK Unmodified 2104.0252 0.025218283 2685 Q4J6C6 PREPL Prolyl endopeptidase-like yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 98.739 90.609 2;3 0.0016509 116922 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 29.582 19.833 12412000 12412000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16661 2685 15185 139353;139354 110888;110889 110889 2 FLYEELGLDSTSVFEDLKK Unmodified 2232.1202 0.1201813 2685 Q4J6C6 PREPL Prolyl endopeptidase-like yes yes 0 0 1 By MS/MS 2 0 1 1 97.368 89.238 3 1.1974E-09 115247 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.409 83.484 13794000 13794000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16662 2685 15186 139355 110890 110890 1 FLYGDEEEDLK Unmodified 1356.6085 0.6085272 2818 Q5VUA4 ZNF318 Zinc finger protein 318 yes yes 0 0 0 By MS/MS 2 0 1 1 65.287 59.37 2 0.045998 75881 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.064 39.881 23101000 0 23101000 0 0 0 0 0 0 0 0 0 0 0 0 0 16663 2818 15187 139356 110891 110891 1 FLYGENMPPQDAEIGYR Oxidation (M) 2014.9095 0.90947702 1331 P33981 TTK Dual specificity protein kinase TTK yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 2 1 1 1 71.86 71.947 2;3 2.9824E-25 82288 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 108.56 97.351 103520000 0 0 0 3018800 5096100 9368700 9429500 7303600 7420800 9601100 11108000 16738000 8428200 6071600 9932900 16664 1331 15188 139357;139358;139359;139360;139361;139362;139363;139364;139365;139366;139367;139368;139369 110892;110893;110894;110895;110896;110897;110898 110893 1986 6 FLYLGDDRNIEEVYVGGK Unmodified 2086.0371 0.037120373 5118 Q9Y2T3 GDA Guanine deaminase yes yes 0 0 1 By MS/MS 2 0 1 1 87.67 79.54 3 3.1308E-05 103440 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.463 60.208 124830000 124830000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16665 5118 15189 139370 110899 110899 1 FLYQLHETEK Unmodified 1306.6558 0.65575216 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.62 3.02 5 24 2 2 1 2 2 2 2 2 2 2 2 2 2 2 2 50.211 49.412 2;3 0.0019707 56516 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 87.308 66.406 1741900000 571200000 56823000 9581700 47453000 42912000 91155000 73777000 44675000 116150000 75045000 109740000 119940000 95851000 97219000 190400000 16666 528 15190 139371;139372;139373;139374;139375;139376;139377;139378;139379;139380;139381;139382;139383;139384;139385;139386;139387;139388;139389;139390;139391;139392;139393;139394;139395;139396;139397;139398;139399 110900;110901;110902;110903;110904;110905;110906;110907;110908;110909;110910 110910 7 FLYSELMK Unmodified 1029.5205 0.52050423 1766 P55265 ADAR Double-stranded RNA-specific adenosine deaminase yes yes 0 0 0 By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 76.09 76.173 2 0.043235 87331 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.325 34.79 28637000 0 0 0 1284300 0 2136500 0 2938300 0 2931900 3314500 4405200 3088700 2731500 5806300 16667 1766 15191 139400;139401;139402;139403;139404;139405;139406;139407;139408 110911 110911 1 FMADIDLDPGCTLNK Oxidation (M) 1724.775 0.77495737 1209 P26639 TARS Threonine--tRNA ligase, cytoplasmic yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.09 3.73 5 2 4 3 2 2 1 1 1 1 80.009 76.747 2;3 2.3877E-72 95263 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 197.3 170.51 2699700000 294490000 2314000000 47271000 0 0 0 0 0 0 0 9530200 0 0 7966100 26355000 16668 1209 15192 139409;139410;139411;139412;139413;139414;139415;139416;139417;139418;139419 110912;110913;110914;110915;110916;110917;110918;110919;110920;110921;110922;110923;110924;110925 110913 1769 14 FMADIDLDPGCTLNK Unmodified 1708.78 0.78004275 1209 P26639 TARS Threonine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 84.891 80.444 2 1.2327E-60 101716 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 181.31 167.23 2083500000 150860000 1916200000 16452000 0 0 0 0 0 0 0 0 0 0 0 0 16669 1209 15192 139420;139421;139422;139423;139424 110926;110927;110928;110929;110930;110931;110932 110930 7 FMAEVGTNR Unmodified 1023.4808 0.48076468 1449 P42226 STAT6 Signal transducer and activator of transcription 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.764 35.945 2 0.004985 39589 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 85.064 68.861 54882000 0 0 0 3208300 2525700 6245100 3508400 4113200 3283200 4613800 4866600 4441900 4835200 4596100 8644600 16670 1449 15193 139425;139426;139427;139428;139429;139430;139431;139432;139433;139434;139435;139436 110933;110934;110935;110936;110937;110938;110939;110940;110941;110942;110943;110944;110945 110937 13 FMAPDIEAAHR Oxidation (M) 1272.5921 0.59210605 1456 P42357 HAL Histidine ammonia-lyase yes yes 0 1 0 By MS/MS 10 0 1 1 49.961 49.342 3 0.0022064 56103 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 53.211 46.323 20015000 0 0 0 20015000 0 0 0 0 0 0 0 0 0 0 0 16671 1456 15194 139437 110946 110946 2289 1 FMAPDIEAAHR Unmodified 1256.5972 0.59719142 1456 P42357 HAL Histidine ammonia-lyase yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By matching 10 0 6 1 1 1 1 1 1 52.575 52.785 3 0.0094379 61397 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 48.004 44.684 24434000 0 0 0 9292900 0 0 0 1507700 842350 0 0 3259000 0 3344300 6187300 16672 1456 15194 139438;139439;139440;139441;139442;139443 110947 110947 1 FMATLGPEEEAEK Unmodified 1450.665 0.66499622 4876 Q9UFC0 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 58.621 58.361 2 0.00045402 66486 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 79.659 73.355 89960000 0 1810100 0 4788000 5000400 5761800 6566400 7233100 6466700 7705100 7512000 8882100 9134300 8915300 10185000 16673 4876 15195 139444;139445;139446;139447;139448;139449;139450;139451;139452;139453;139454;139455;139456 110948;110949;110950;110951;110952;110953;110954;110955;110956;110957;110958;110959 110950 11 FMATLGPEEEAEK Oxidation (M) 1466.6599 0.65991084 4876 Q9UFC0 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching 8.25 3.03 1 3 1 1 1 1 51.504 50.033 2 2.6319E-07 60847 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 106.62 95.908 22947000 0 6367300 0 6417200 5121100 0 0 5041200 0 0 0 0 0 0 0 16674 4876 15195 139457;139458;139459;139460 110960;110961;110962;110963 110960 6225 4 FMATNDLMTELQK 2 Oxidation (M) 1572.7164 0.71637986 3170 Q86VP6 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 2 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 60.165 60.35 2 5.5496E-05 69442 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 83.862 67.971 72807000 0 0 0 0 4431800 13366000 0 0 4520000 12070000 10393000 8657400 0 7896300 11473000 16675 3170 15196 139461;139462;139463;139464;139465;139466;139467;139468 110964;110965;110966;110967;110968;110969;110970;110971;110972;110973;110974;110975;110976;110977 110966 4785;4786 14 FMATNDLMTELQK Oxidation (M) 1556.7215 0.72146524 3170 Q86VP6 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 1 0 By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.19 76.234 2 3.5135E-08 87929 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 102.52 86.633 71779000 0 0 0 1578400 1932500 9340800 3133100 5354900 2844200 9144400 9021600 0 5566000 6996200 16867000 16676 3170 15196 139469;139470;139471;139472;139473;139474;139475;139476;139477;139478;139479 110978;110979;110980;110981;110982;110983;110984 110979 4785;4786 7 FMATNDLMTELQK Unmodified 1540.7266 0.72655062 3170 Q86VP6 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 81.583 80.892 2 0.0002156 93639 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 91.549 77.343 51138000 0 20286000 0 0 0 3042000 0 2085500 0 4192900 0 0 0 3919100 17612000 16677 3170 15196 139480;139481;139482;139483;139484;139485 110985;110986;110987;110988;110989 110986 4 FMAVSDVPSLSVGK Unmodified 1435.7381 0.73810158 2823 Q5VW36 FOCAD Focadhesin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.808 79.867 2 0.00057595 92408 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 80.763 62.899 82663000 0 0 0 4188800 6815900 8866800 5278300 8305900 5141500 11157000 6750400 7815200 3469900 5679500 9194200 16678 2823 15197 139486;139487;139488;139489;139490;139491;139492;139493;139494;139495;139496;139497 110990;110991;110992;110993;110994;110995;110996;110997;110998;110999;111000;111001 110995 12 FMAVSDVPSLSVGK Oxidation (M) 1451.733 0.7330162 2823 Q5VW36 FOCAD Focadhesin yes yes 0 1 0 By MS/MS 10 0 1 1 74.384 73.836 2 0.00058625 85764 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 62.799 47.17 24739000 0 0 0 24739000 0 0 0 0 0 0 0 0 0 0 0 16679 2823 15197 139498 111002 111002 4461 1 FMDASALTGIPLPLIK Oxidation (M) 1701.9375 0.93752967 1180 P24941 CDK2 Cyclin-dependent kinase 2 yes yes 0 1 0 By MS/MS 10 0 1 1 95.364 95.511 2 0.00020665 110754 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.153 60.913 2874300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2874300 16680 1180 15198 139499 111003 111003 1710 1 FMDLYPCSASELK Oxidation (M) 1575.6949 0.69491614 2222 Q12996 CSTF3 Cleavage stimulation factor subunit 3 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 73.655 69.104 2 0.0004854 87074 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.616 94.616 66797000 0 66797000 0 0 0 0 0 0 0 0 0 0 0 0 0 16681 2222 15199 139500;139501 111004;111005 111004 3611 2 FMDLYPCSASELK Unmodified 1559.7 0.70000151 2222 Q12996 CSTF3 Cleavage stimulation factor subunit 3 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 81.904 78.288 2 0.023591 97465 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.489 75.8 62800000 0 61021000 1779200 0 0 0 0 0 0 0 0 0 0 0 0 16682 2222 15199 139502;139503 111006 111006 0 FMDQHPEMDFSK Oxidation (M) 1526.617 0.61700017 5087 Q9Y266 NUDC Nuclear migration protein nudC yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 7 21 3 4 2 2 1 2 1 2 2 2 2 1 2 2 44.809 43.777 2;3 0.0004566 44658 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.492 63.02 906360000 0 378550000 126200000 17296000 12287000 41320000 23358000 15501000 17153000 43817000 48521000 46728000 9602400 40778000 85257000 16683 5087 15200 139504;139505;139506;139507;139508;139509;139510;139511;139512;139513;139514;139515;139516;139517;139518;139519;139520;139521;139522;139523;139524;139525;139526;139527;139528;139529;139530;139531 111007;111008;111009;111010;111011;111012;111013 111011 6480;6481 5 FMDQHPEMDFSK Unmodified 1510.6221 0.62208554 5087 Q9Y266 NUDC Nuclear migration protein nudC yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 6 12 2 2 2 1 1 1 1 1 1 1 1 1 1 1 1 58.236 56.325 2;3 1.3188E-17 72913 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 181.66 166.99 1140300000 60153000 628530000 122100000 9327500 7904000 44414000 12568000 18950000 7747600 35875000 26280000 29511000 13764000 29821000 93360000 16684 5087 15200 139532;139533;139534;139535;139536;139537;139538;139539;139540;139541;139542;139543;139544;139545;139546;139547;139548;139549 111014;111015;111016;111017;111018;111019;111020;111021;111022;111023;111024 111018 8 FMDQHPEMDFSK 2 Oxidation (M) 1542.6119 0.61191479 5087 Q9Y266 NUDC Nuclear migration protein nudC yes yes 0 2 0 By MS/MS By MS/MS By MS/MS 2 0 6 1 3 2 33.98 30.23 2;3 0.00204 39664 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.081 73.649 382750000 4062600 212990000 165700000 0 0 0 0 0 0 0 0 0 0 0 0 16685 5087 15200 139550;139551;139552;139553;139554;139555 111025;111026;111027 111026 6480;6481 1 FMEDMMPK 3 Oxidation (M) 1075.4024 0.40243929 3741 Q96AT9;Q2QD12 RPE;RPEL1 Ribulose-phosphate 3-epimerase;Ribulose-phosphate 3-epimerase-like protein 1 yes no 0 3 0 By MS/MS 2.5 0.5 1 1 2 17.605 14.066 2 0.044931 18415 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 42.869 42.869 9039500 0 9039500 0 0 0 0 0 0 0 0 0 0 0 0 0 16686 3741 15201 139556;139557 111028 111028 1 FMEDMMPK 2 Oxidation (M) 1059.4075 0.40752466 3741 Q96AT9;Q2QD12 RPE;RPEL1 Ribulose-phosphate 3-epimerase;Ribulose-phosphate 3-epimerase-like protein 1 yes no 0 2 0 By MS/MS 2 0 1 1 27.549 23.244 2 0.030365 30630 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.998 69.998 12617000 0 12617000 0 0 0 0 0 0 0 0 0 0 0 0 0 16687 3741 15201 139558 111029 111029 0 FMELLEPLNERK Unmodified 1517.7912 0.79119978 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 83.822 79.603 3 0.00071319 91062 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.727 49.281 58957000 30492000 16941000 0 0 0 0 0 0 0 0 0 0 0 0 11524000 16688 2047 15202 139559;139560;139561 111030;111031;111032 111031 3 FMELLEPLNERK Oxidation (M) 1533.7861 0.78611441 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 3 6 2 1 1 1 1 1 1 1 69.757 67.594 2;3 1.3832E-05 90250 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 100.04 87.27 151970000 104910000 0 8884500 3291100 2298500 0 0 5288800 0 0 8826100 10792000 7684400 0 0 16689 2047 15202 139562;139563;139564;139565;139566;139567;139568;139569;139570 111033;111034;111035;111036;111037;111038 111033 3320 4 FMELNLAQK Unmodified 1092.5638 0.56376603 1856 P61758 VBP1 Prefoldin subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 71.065 69.801 2 3.3538E-06 88876 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 158.36 97.597 612450000 151120000 333370000 32088000 3626800 2627600 5455300 3699300 3163000 0 6473100 12487000 15921000 5131700 10024000 27259000 16690 1856 15203 139571;139572;139573;139574;139575;139576;139577;139578;139579;139580;139581;139582;139583;139584;139585 111039;111040;111041;111042;111043;111044;111045;111046;111047;111048;111049;111050;111051;111052;111053 111043 15 FMELNLAQK Oxidation (M) 1108.5587 0.55868065 1856 P61758 VBP1 Prefoldin subunit 3 yes yes 0 1 0 By MS/MS 2 0 1 1 59.331 53.488 2 0.0009337 68780 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.27 75.722 476110000 0 476110000 0 0 0 0 0 0 0 0 0 0 0 0 0 16691 1856 15203 139586 111054 111054 3008 1 FMEMLSK 2 Oxidation (M) 916.40343 0.40342556 2178 Q10567 AP1B1 AP-1 complex subunit beta-1 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 27.866 23.573 2 0.036563 31038 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.671 64.784 104650000 22561000 62744000 19343000 0 0 0 0 0 0 0 0 0 0 0 0 16692 2178 15204 139587;139588;139589 111055;111056 111055 0 FMEMLSK Oxidation (M) 900.40851 0.40851094 2178 Q10567 AP1B1 AP-1 complex subunit beta-1 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 41.26 36.089 2 0.04272 49791 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.058 36.137 35334000 26002000 0 9332100 0 0 0 0 0 0 0 0 0 0 0 0 16693 2178 15204 139590;139591 111057 111057 1 FMEQSRSPSVSPSK Unmodified 1565.7508 0.75079153 3892 Q96JG6 CCDC132 Coiled-coil domain-containing protein 132 yes yes 0 0 1 By MS/MS 2 0 1 1 35.839 29.492 3 0.016785 41246 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 29.013 18.368 15231000 15231000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16694 3892 15205 139592 111058 111058 1 FMEQVIFK Unmodified 1040.5365 0.53648865 1835 P61158 ACTR3 Actin-related protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 74.805 74.86 2 0.0068357 85639 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.662 38.541 62768000 0 0 0 2802200 3008300 4056700 2034500 3705200 0 3832700 6641400 8137800 2590600 5311400 20647000 16695 1835 15206 139593;139594;139595;139596;139597;139598;139599;139600;139601;139602;139603 111059;111060;111061;111062;111063;111064;111065 111061 7 FMERDPDELR Unmodified 1306.5976 0.59758535 1020 P15374 UCHL3 Ubiquitin carboxyl-terminal hydrolase isozyme L3 yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 38.265 38.397 3 0.012342 41832 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.44 42.407 62359000 0 0 0 2333100 1880600 5393400 1517400 0 2387600 4319500 0 8588800 0 7257400 28681000 16696 1020 15207 139604;139605;139606;139607;139608;139609;139610;139611;139612 111066;111067 111067 2 FMERDPDELR Oxidation (M) 1322.5925 0.59249998 1020 P15374 UCHL3 Ubiquitin carboxyl-terminal hydrolase isozyme L3 yes yes 0 1 1 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 30.494 30.692 3 0.023131 32994 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 50.284 41.329 69069000 0 0 0 2761000 1841600 5193900 2992800 2493000 0 0 9609800 14216000 3602600 5487100 20871000 16697 1020 15207 139613;139614;139615;139616;139617;139618;139619;139620;139621;139622 111068 111068 0 FMETSAK Oxidation (M) 828.36875 0.36875462 1824 P61006 RAB8A Ras-related protein Rab-8A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 7.2661 7.3857 2 0.033157 5660 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 62.717 40.095 78734000 0 0 0 6007200 4511000 0 7847300 5685200 5418200 8876300 0 12881000 10126000 7105500 10277000 16698 1824 15208 139623;139624;139625;139626;139627;139628;139629;139630;139631;139632 111069;111070;111071;111072;111073 111070 5 FMETTDPSTASSLQAK Unmodified 1712.7927 0.79271593 2086 Q03001 DST Dystonin yes yes 0 0 0 By MS/MS 2 0 1 1 55.194 49.379 2 1.7403E-10 63904 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.44 123.99 14549000 0 14549000 0 0 0 0 0 0 0 0 0 0 0 0 0 16699 2086 15209 139633 111074 111074 1 FMETVAEK Unmodified 953.45282 0.4528186 931 P10909 CLU Clusterin;Clusterin beta chain;Clusterin alpha chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 33.219 33.007 2 0.0048728 35207 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 109.01 72.827 277270000 0 123650000 0 0 0 0 0 18213000 9230300 19189000 22829000 20880000 17334000 16624000 29324000 16700 931 15210 139634;139635;139636;139637;139638;139639;139640;139641;139642 111075;111076;111077;111078;111079;111080;111081;111082;111083 111082 9 FMGTELNGK Oxidation (M) 1011.4695 0.46953129 304 O43175 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.16 3.73 5 2 12 2 3 2 1 1 1 1 1 1 1 1 1 1 1 1 26.598 25.319 2 3.5426E-06 27542 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 156.4 122.66 3116200000 124350000 2110800000 176130000 42047000 31645000 96589000 45974000 56473000 31488000 82985000 69781000 67695000 67472000 41947000 70827000 16701 304 15211 139643;139644;139645;139646;139647;139648;139649;139650;139651;139652;139653;139654;139655;139656;139657;139658;139659;139660;139661 111084;111085;111086;111087;111088;111089;111090;111091;111092;111093;111094;111095;111096;111097;111098;111099;111100;111101;111102;111103;111104;111105;111106;111107;111108;111109;111110 111088 389 26 FMGTELNGK Unmodified 995.47462 0.47461667 304 O43175 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 41.07 40.29 2 0.0004187 51313 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.5 91.192 2822200000 0 1562600000 148450000 50499000 54977000 109110000 71069000 57619000 50299000 118930000 127700000 100210000 91799000 97144000 181780000 16702 304 15211 139662;139663;139664;139665;139666;139667;139668;139669;139670;139671;139672;139673;139674;139675;139676 111111;111112;111113;111114;111115;111116;111117;111118;111119;111120;111121;111122;111123;111124;111125 111114 13 FMIELDGTENK Oxidation (M) 1311.6017 0.60166768 991 P13929 ENO3 Beta-enolase yes yes 0 1 0 By MS/MS By MS/MS By matching 2.2 0.4 4 1 1 3 1 70.739 65.112 2 1.9531E-05 82930 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.53 108.55 156780000 15579000 139290000 1908500 0 0 0 0 0 0 0 0 0 0 0 0 16703 991 15212 139677;139678;139679;139680;139681 111126;111127;111128;111129;111130 111126 1341 5 FMIQGGDFSNQNGTGGESIYGEK Unmodified 2435.07 0.069953419 2162 Q08752 PPID Peptidyl-prolyl cis-trans isomerase D yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 78.73 74.652 3 2.2032E-23 92829 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.569 67.037 93423000 0 93423000 0 0 0 0 0 0 0 0 0 0 0 0 0 16704 2162 15213 139682;139683 111131;111132 111131 2 FMIQGGDFSNQNGTGGESIYGEK Oxidation (M) 2451.0649 0.064868041 2162 Q08752 PPID Peptidyl-prolyl cis-trans isomerase D yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 75.558 71.303 3 7.4781E-05 85775 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 61.703 58.136 75709000 0 75709000 0 0 0 0 0 0 0 0 0 0 0 0 0 16705 2162 15213 139684;139685 111133 111133 3477 1 FMITGGNLQDSK Oxidation (M) 1325.6286 0.62855113 2922 Q6P1N9 TATDN1 Putative deoxyribonuclease TATDN1 yes yes 0 1 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 56.08 51.218 2 0.0022389 65974 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.499 42.505 45069000 0 40762000 4306300 0 0 0 0 0 0 0 0 0 0 0 0 16706 2922 15214 139686;139687;139688 111134;111135;111136 111134 4547 3 FMITGGNLQDSK Unmodified 1309.6336 0.63363651 2922 Q6P1N9 TATDN1 Putative deoxyribonuclease TATDN1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 65.552 58.446 2 0.00024187 78122 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 118.4 96.553 148940000 12905000 136030000 0 0 0 0 0 0 0 0 0 0 0 0 0 16707 2922 15214 139689;139690 111137;111138 111138 1 FMLTNLK Unmodified 865.47316 0.47316011 2408 Q14457 BECN1 Beclin-1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 73.117 67.264 2 0.016687 89160 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 117.7 55.36 12599000 11023000 0 1575900 0 0 0 0 0 0 0 0 0 0 0 0 16708 2408 15215 139691;139692 111139 111139 1 FMNPFNMPNLYQK Oxidation (M) 1658.7585 0.75851945 1313 P31948 STIP1 Stress-induced-phosphoprotein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 5.2 3.92 3 2 2 1 2 86.828 82.675 2 2.6125E-08 106211 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.44 99.207 100100000 35051000 36244000 0 0 0 0 0 0 0 0 0 0 0 0 28807000 16709 1313 15216 139693;139694;139695;139696;139697 111140;111141;111142;111143;111144 111140 1958;1959 5 FMNPFNMPNLYQK 2 Oxidation (M) 1674.7534 0.75343407 1313 P31948 STIP1 Stress-induced-phosphoprotein 1 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.33 2.21 1 11 1 1 1 2 1 1 1 1 1 2 77.44 76.804 2 0.00031869 88839 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 66.962 62.879 172520000 7853400 0 0 6189100 6890000 26882000 3702000 0 16166000 11302000 0 19255000 10099000 0 64181000 16710 1313 15216 139698;139699;139700;139701;139702;139703;139704;139705;139706;139707;139708;139709 111145;111146;111147;111148 111148 1958;1959 2 FMNPFNMPNLYQK Unmodified 1642.7636 0.76360482 1313 P31948 STIP1 Stress-induced-phosphoprotein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 94.871 86.741 2 3.8287E-06 112323 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.2 81.457 20358000 20358000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16711 1313 15216 139710 111149 111149 1 FMNPTDQAR Unmodified 1078.4866 0.48657834 5123 Q9Y2W2 WBP11 WW domain-binding protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.076 34.258 2 0.0033124 37136 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 93.429 81.235 91953000 0 0 0 3536700 5878400 5376900 6094100 6273900 5005600 9947900 10788000 11713000 8838900 6893800 11606000 16712 5123 15217 139711;139712;139713;139714;139715;139716;139717;139718;139719;139720;139721;139722 111150;111151;111152;111153;111154;111155;111156;111157;111158;111159;111160 111155 11 FMNPTDQAR Oxidation (M) 1094.4815 0.48149296 5123 Q9Y2W2 WBP11 WW domain-binding protein 11 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 24.219 24.212 2 0.026678 25354 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 44.377 24.674 38258000 0 0 0 0 7633100 6493500 9778100 0 4625100 9727700 0 0 0 0 0 16713 5123 15217 139723;139724;139725;139726;139727 111161 111161 6513 1 FMNPTDQARK Unmodified 1206.5815 0.58154136 5123 Q9Y2W2 WBP11 WW domain-binding protein 11 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 4 10 2 2 1 1 1 1 1 1 1 1 1 1 27.883 26.549 2;3 1.6696E-06 37246 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 109.66 104.35 334960000 139090000 25888000 0 8323000 0 18997000 875570 17461000 16035000 25543000 0 27419000 16935000 18907000 19482000 16714 5123 15218 139728;139729;139730;139731;139732;139733;139734;139735;139736;139737;139738;139739;139740;139741 111162;111163;111164;111165;111166;111167;111168;111169;111170 111166 8 FMNPTDQARK Oxidation (M) 1222.5765 0.57645598 5123 Q9Y2W2 WBP11 WW domain-binding protein 11 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 19.308 18.321 3 0.00070262 25805 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 105.4 95.981 385510000 189500000 28357000 44225000 11185000 17063000 13419000 19201000 0 14792000 19431000 0 17237000 11102000 0 0 16715 5123 15218 139742;139743;139744;139745;139746;139747;139748;139749;139750;139751;139752 111171;111172;111173;111174;111175;111176;111177;111178;111179;111180;111181 111176 6513 2 FMNSHLQK Oxidation (M) 1019.4859 0.48585006 1199 P26196 DDX6 Probable ATP-dependent RNA helicase DDX6 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 13.49 10.281 2 0.010561 15604 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.01 40.014 80955000 59314000 12488000 9153700 0 0 0 0 0 0 0 0 0 0 0 0 16716 1199 15219 139753;139754;139755 111182 111182 1745 1 FMNSHLQK Unmodified 1003.4909 0.49093544 1199 P26196 DDX6 Probable ATP-dependent RNA helicase DDX6 yes yes 0 0 0 By MS/MS 2 0 1 1 25.036 19.958 2 0.012271 28417 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 99.799 46.223 59446000 59446000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16717 1199 15219 139756 111183;111184 111184 2 FMPIPMYDASQALK 2 Oxidation (M) 1642.7735 0.77350081 2833 Q5VZK9 LRRC16A Leucine-rich repeat-containing protein 16A yes yes 0 2 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 74.658 74.6 2 0.00074819 86114 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 51.092 44.119 44130000 0 0 0 4958000 5686300 8189500 0 0 6238900 0 0 12295000 0 6761700 0 16718 2833 15220 139757;139758;139759;139760;139761;139762;139763 111185;111186;111187;111188;111189 111188 4492;4493 5 FMQASEDLLK Oxidation (M) 1196.5747 0.57472465 1022 P15531 NME1 Nucleoside diphosphate kinase A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.6 3.62 16 3 43 2 12 5 1 5 4 6 6 4 4 4 5 2 1 1 55.806 54.676 2 0.00065703 59095 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 110.87 85.949 19465000000 335350000 6152200000 348130000 504920000 972990000 900480000 1394100000 1719000000 1480700000 1317800000 1495600000 2547900000 29706000 67347000 198650000 16719 1022 15221 139764;139765;139766;139767;139768;139769;139770;139771;139772;139773;139774;139775;139776;139777;139778;139779;139780;139781;139782;139783;139784;139785;139786;139787;139788;139789;139790;139791;139792;139793;139794;139795;139796;139797;139798;139799;139800;139801;139802;139803;139804;139805;139806;139807;139808;139809;139810;139811;139812;139813;139814;139815;139816;139817;139818;139819;139820;139821;139822;139823;139824;139825 111190;111191;111192;111193;111194;111195;111196;111197;111198;111199;111200;111201;111202;111203;111204;111205;111206;111207;111208;111209;111210;111211;111212;111213;111214;111215;111216;111217;111218;111219;111220;111221;111222;111223;111224;111225;111226;111227;111228;111229;111230;111231;111232;111233;111234;111235;111236;111237;111238;111239;111240;111241;111242;111243;111244;111245;111246;111247;111248;111249;111250;111251;111252 111191 1419 61 FMQASEDLLK Unmodified 1180.5798 0.57981002 1022 P15531 NME1 Nucleoside diphosphate kinase A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.11 3.8 6 1 12 1 5 1 1 1 1 1 1 1 1 1 1 1 1 1 67.477 65.718 2 0.00052853 75109 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 124.23 105.45 15528000000 307410000 7963600000 98693000 254870000 477640000 481500000 713840000 1099300000 744400000 728480000 1020600000 1354800000 15153000 54539000 213260000 16720 1022 15221 139826;139827;139828;139829;139830;139831;139832;139833;139834;139835;139836;139837;139838;139839;139840;139841;139842;139843;139844 111253;111254;111255;111256;111257;111258;111259;111260;111261;111262;111263;111264;111265;111266;111267;111268;111269;111270;111271;111272;111273;111274;111275 111254 20 FMQDASDVMQLLLK 2 Oxidation (M) 1669.8055 0.80552922 149 O00410 IPO5 Importin-5 yes yes 0 2 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By matching 8.53 2.94 1 2 12 3 2 2 1 1 2 1 1 1 1 81.736 81.01 2;3 2.0298E-14 93509 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 115.18 105.52 139910000 0 40914000 0 6310600 0 32066000 0 2680900 2988800 32833000 6299500 0 3348600 3177200 9288400 16721 149 15222 139845;139846;139847;139848;139849;139850;139851;139852;139853;139854;139855;139856;139857;139858;139859 111276;111277;111278;111279;111280 111278 202;203 5 FMQDASDVMQLLLK Oxidation (M) 1653.8106 0.8106146 149 O00410 IPO5 Importin-5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 6 2 1 6 1 96.96 93.066 2;3 1.467E-29 114971 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 142.07 129.11 219690000 0 218620000 1072900 0 0 0 0 0 0 0 0 0 0 0 0 16722 149 15222 139860;139861;139862;139863;139864;139865;139866;139867 111281;111282;111283;111284;111285;111286;111287 111281 202;203 7 FMQDASDVMQLLLK Unmodified 1637.8157 0.81569997 149 O00410 IPO5 Importin-5 yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 99.361 95.102 2 0.00067108 117373 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.55 86.779 130090000 0 130090000 0 0 0 0 0 0 0 0 0 0 0 0 0 16723 149 15222 139868;139869;139870 111288;111289;111290 111288 3 FMQDPMEIFVDDETK 2 Oxidation (M) 1875.7907 0.79066702 2347 Q13838 DDX39B Spliceosome RNA helicase DDX39B yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.59 3.61 7 2 20 1 5 3 2 1 2 2 1 1 2 3 1 2 2 1 73.909 72.631 2;3 9.2426E-08 84394 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 89.301 83.267 776030000 11020000 395450000 17484000 24932000 11705000 63880000 20700000 11584000 8354100 56553000 56582000 18765000 28031000 29570000 21424000 16724 2347 15223 139871;139872;139873;139874;139875;139876;139877;139878;139879;139880;139881;139882;139883;139884;139885;139886;139887;139888;139889;139890;139891;139892;139893;139894;139895;139896;139897;139898;139899 111291;111292;111293;111294;111295;111296;111297;111298;111299;111300;111301;111302;111303;111304;111305;111306;111307;111308;111309;111310;111311;111312;111313;111314;111315;111316;111317 111294 3826;3827 25 FMQDPMEIFVDDETK Oxidation (M) 1859.7958 0.79575239 2347 Q13838 DDX39B Spliceosome RNA helicase DDX39B yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.74 3.55 9 2 27 3 6 2 1 1 2 2 1 1 3 3 3 2 4 4 84.49 83.124 2;3 3.1372E-80 98368 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 201 182.33 1244800000 61783000 1006600000 11843000 1444800 2225800 15292000 5772600 4635500 3370600 23719000 16681000 19210000 6676700 18570000 46999000 16725 2347 15223 139900;139901;139902;139903;139904;139905;139906;139907;139908;139909;139910;139911;139912;139913;139914;139915;139916;139917;139918;139919;139920;139921;139922;139923;139924;139925;139926;139927;139928;139929;139930;139931;139932;139933;139934;139935;139936;139937 111318;111319;111320;111321;111322;111323;111324;111325;111326;111327;111328;111329;111330;111331;111332;111333;111334;111335;111336;111337;111338;111339;111340;111341;111342;111343;111344;111345;111346;111347 111325 3826;3827 27 FMQDPMEIFVDDETK Unmodified 1843.8008 0.80083777 2347 Q13838 DDX39B Spliceosome RNA helicase DDX39B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.29 3.61 5 2 2 2 1 1 1 94.094 90.075 2;3 5.6792E-57 113032 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 172.76 166.65 692770000 93110000 585960000 5947400 0 0 0 0 0 0 2047600 0 0 0 0 5706100 16726 2347 15223 139938;139939;139940;139941;139942;139943;139944 111348;111349;111350;111351;111352;111353;111354;111355;111356;111357 111349 9 FMQDPMEVFVDDETK 2 Oxidation (M) 1861.775 0.77501695 118 O00148 DDX39A ATP-dependent RNA helicase DDX39A yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 6 24 4 2 2 2 2 2 2 2 2 2 2 2 2 2 67.103 66.147 2;3 3.5825E-27 75367 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 126.1 112.14 401980000 0 175250000 4214700 12061000 11490000 32399000 19753000 12792000 13766000 24696000 21208000 24304000 16872000 14792000 18384000 16727 118 15224 139945;139946;139947;139948;139949;139950;139951;139952;139953;139954;139955;139956;139957;139958;139959;139960;139961;139962;139963;139964;139965;139966;139967;139968;139969;139970;139971;139972;139973;139974 111358;111359;111360;111361;111362;111363;111364;111365;111366;111367;111368;111369;111370;111371;111372;111373;111374;111375;111376;111377;111378;111379;111380;111381;111382;111383;111384;111385;111386;111387;111388;111389 111384 150;151 32 FMQDPMEVFVDDETK Oxidation (M) 1845.7801 0.78010233 118 O00148 DDX39A ATP-dependent RNA helicase DDX39A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.86 3.49 5 1 16 1 5 2 2 1 1 1 1 1 2 1 2 2 82.831 81.506 2;3 1.2248E-39 102921 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.16 122.5 524800000 11336000 388970000 0 0 4620800 14395000 1794200 6219000 3840400 15365000 8856200 18470000 6442000 11786000 32700000 16728 118 15224 139975;139976;139977;139978;139979;139980;139981;139982;139983;139984;139985;139986;139987;139988;139989;139990;139991;139992;139993;139994;139995;139996 111390;111391;111392;111393;111394;111395;111396;111397;111398;111399;111400;111401;111402;111403;111404;111405;111406;111407 111395 150;151 14 FMQDPMEVFVDDETK Unmodified 1829.7852 0.78518771 118 O00148 DDX39A ATP-dependent RNA helicase DDX39A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.12 3.79 4 1 3 2 2 1 1 1 1 90.627 87.308 2;3 1.0679E-10 109757 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 135.6 124.36 459910000 31130000 411830000 2950400 0 0 1711900 0 0 0 1500200 0 0 0 0 10788000 16729 118 15224 139997;139998;139999;140000;140001;140002;140003;140004 111408;111409;111410;111411;111412;111413;111414 111409 7 FMQEVYLDK Unmodified 1171.5583 0.5583463 4674 Q9NVN8 GNL3L Guanine nucleotide-binding protein-like 3-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.953 61.056 2 0.0054364 69666 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 77.732 60.346 38145000 0 0 0 3582300 2529300 2466300 2399000 3160700 2217800 3777200 3511100 3779600 2878000 2701500 5142100 16730 4674 15225 140005;140006;140007;140008;140009;140010;140011;140012;140013;140014;140015;140016 111415;111416;111417;111418;111419;111420;111421;111422;111423;111424;111425 111416 11 FMQEVYLDK Oxidation (M) 1187.5533 0.55326092 4674 Q9NVN8 GNL3L Guanine nucleotide-binding protein-like 3-like protein yes yes 0 1 0 By MS/MS 2 0 1 1 54.042 48.236 2 0.03624 62318 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.019 44.638 16012000 0 16012000 0 0 0 0 0 0 0 0 0 0 0 0 0 16731 4674 15225 140017 111426 111426 1 FMQTFVLAPEGSVANK Oxidation (M) 1753.8709 0.87090667 2263 Q13283 G3BP1 Ras GTPase-activating protein-binding protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 2 2 2 1 2 1 2 76.245 76.293 2;3 8.8791E-43 88003 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 163.93 149.25 1035300000 0 0 0 76571000 87246000 97537000 107860000 75042000 78676000 113470000 108890000 81719000 67213000 47276000 93757000 16732 2263 15226 140018;140019;140020;140021;140022;140023;140024;140025;140026;140027;140028;140029;140030;140031;140032;140033;140034;140035;140036;140037;140038;140039 111427;111428;111429;111430;111431;111432;111433;111434;111435;111436;111437;111438;111439;111440 111428 3693 13 FMQTFVLAPEGSVANK Unmodified 1737.876 0.87599205 2263 Q13283 G3BP1 Ras GTPase-activating protein-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.846 81.907 2 9.4195E-50 94842 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 166.04 159.6 414920000 0 0 0 15299000 21014000 39082000 21887000 36707000 27923000 51820000 40939000 43672000 18381000 26851000 71346000 16733 2263 15226 140040;140041;140042;140043;140044;140045;140046;140047;140048;140049;140050;140051 111441;111442;111443;111444;111445;111446;111447;111448;111449;111450;111451;111452 111450 12 FMQTFVLAPEGSVPNK Oxidation (M) 1779.8866 0.88655673 5028 Q9UN86 G3BP2 Ras GTPase-activating protein-binding protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 77.905 76.779 2 3.3434E-41 96608 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 146.36 129.41 597850000 39238000 147400000 4391100 23469000 33258000 40031000 38551000 27147000 35292000 45826000 39804000 36198000 26341000 22650000 38259000 16734 5028 15227 140052;140053;140054;140055;140056;140057;140058;140059;140060;140061;140062;140063;140064;140065;140066;140067 111453;111454;111455;111456;111457;111458;111459;111460;111461;111462;111463;111464;111465;111466 111459 6368 14 FMQTFVLAPEGSVPNK Unmodified 1763.8916 0.89164211 5028 Q9UN86 G3BP2 Ras GTPase-activating protein-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 83.307 82.173 2;3 2.1184E-19 95289 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 107.85 93.941 365800000 53870000 162860000 0 7115700 9831100 14041000 8461300 12417000 10224000 18046000 12208000 13974000 9027800 8358600 25374000 16735 5028 15227 140068;140069;140070;140071;140072;140073;140074;140075;140076;140077;140078;140079;140080;140081;140082 111467;111468;111469;111470;111471;111472;111473;111474;111475;111476;111477;111478;111479;111480;111481;111482 111467 16 FMSAYEQR Unmodified 1030.4542 0.45421558 2534 Q15428 SF3A2 Splicing factor 3A subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 33.06 33.309 2 0.029639 35866 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 56.014 45.141 103540000 0 0 0 0 4642300 6562700 7275000 2481900 0 10742000 13576000 11383000 11555000 13808000 21512000 16736 2534 15228 140083;140084;140085;140086;140087;140088;140089;140090;140091;140092 111483;111484;111485 111485 3 FMSAYEQR Oxidation (M) 1046.4491 0.4491302 2534 Q15428 SF3A2 Splicing factor 3A subunit 2 yes yes 0 1 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 21.45 21.699 2 0.032804 21460 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 46.994 33.415 31856000 0 0 0 0 4929500 0 0 3451800 4060300 0 5648800 0 0 7633700 6131700 16737 2534 15228 140093;140094;140095;140096;140097;140098 111486 111486 1 FMSVQRPGPYDRPGTAR Oxidation (M) 1949.953 0.95301359 1692 P52597 HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes yes 0 1 2 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 34.009 34.496 4 9.9866E-05 37930 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 72.446 65.718 284400000 0 0 0 0 0 0 0 0 0 37596000 0 124830000 42915000 0 79064000 16738 1692 15229 140099;140100;140101;140102 111487;111488;111489;111490 111487 2735 4 FMSVQRPGPYDRPGTAR Unmodified 1933.9581 0.95809897 1692 P52597 HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes yes 0 0 2 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 2 2 1 1 1 1 1 2 43.203 43.403 3;4 0.0038661 48669 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 42.338 32.415 258140000 0 0 0 5983200 2925400 30010000 10321000 17328000 13527000 15918000 14078000 48475000 21485000 0 78093000 16739 1692 15229 140103;140104;140105;140106;140107;140108;140109;140110;140111;140112;140113;140114;140115;140116 111491;111492;111493;111494 111493 2 FMTDPIR Oxidation (M) 894.42694 0.4269382 1400 P38919 EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 35.53 35.701 2 0.035755 38701 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 57.811 39.006 216920000 0 0 0 10808000 12460000 22042000 28457000 25369000 16211000 20739000 29409000 29473000 20855000 0 1100100 16740 1400 15230 140117;140118;140119;140120;140121;140122;140123;140124;140125;140126;140127 111495;111496 111496 2 FMTDPIR Unmodified 878.43202 0.43202358 1400 P38919 EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.47 49.628 2 0.033465 56904 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 71.949 50.965 587710000 0 0 0 21260000 32198000 54260000 45185000 62039000 28635000 50069000 72820000 56828000 44646000 40062000 79707000 16741 1400 15230 140128;140129;140130;140131;140132;140133;140134;140135;140136;140137;140138;140139 111497;111498 111498 2 FMVVDNPQK Oxidation (M) 1092.5274 0.52738052 3578 Q8WWW0 RASSF5 Ras association domain-containing protein 5 yes yes 0 1 0 By MS/MS 2 0 1 1 39.298 34.286 2 0.034642 44768 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.895 36.001 5300000 0 5300000 0 0 0 0 0 0 0 0 0 0 0 0 0 16742 3578 15231 140140 111499 111499 1 FMVVDNPQK Unmodified 1076.5325 0.5324659 3578 Q8WWW0 RASSF5 Ras association domain-containing protein 5 yes yes 0 0 0 By MS/MS 2 0 1 1 49.131 43.483 2 0.049254 56611 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.255 50.487 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16743 3578 15231 140141 111500 111500 1 FMWGNLTLASTEK Oxidation (M) 1512.7283 0.72826518 2418 Q14596 NBR1 Next to BRCA1 gene 1 protein yes yes 0 1 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 51.193 51.638 2 0.0026653 57519 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.268 20.704 55574000 0 0 0 0 0 0 0 0 0 0 19672000 0 0 18820000 17082000 16744 2418 15232 140142;140143;140144 111501 111501 3971 1 FMYDPQTDQNIK Unmodified 1498.6762 0.67622961 3702 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 55.964 56.045 2 8.2899E-07 63521 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 116.52 106.29 54475000 0 0 0 4132500 2898200 3453400 4130900 6020600 3109100 5597400 10344000 4880000 4358000 5550900 0 16745 3702 15233 140145;140146;140147;140148;140149;140150;140151;140152;140153;140154;140155 111502;111503;111504;111505;111506;111507;111508;111509;111510;111511;111512;111513 111504 12 FMYDPQTDQNIK Oxidation (M) 1514.6711 0.67114423 3702 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 47.872 48.199 2 0.0023435 53781 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.064 52.418 27031000 0 0 0 5317500 0 0 0 0 0 0 5421600 8305800 0 0 7986400 16746 3702 15233 140156;140157;140158;140159 111514;111515;111516 111515 5278 3 FNADEFEDMVAEK Oxidation (M) 1559.645 0.64498906 1220 P27635 RPL10 60S ribosomal protein L10 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.74 3.54 7 2 22 3 5 1 2 2 2 2 2 2 2 2 1 1 2 2 68.844 67.589 2 2.6281E-36 85308 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 181.31 174.99 786950000 21008000 195770000 2501500 31755000 38548000 54550000 37503000 39715000 38569000 70147000 66700000 44830000 29962000 52309000 63087000 16747 1220 15234 140160;140161;140162;140163;140164;140165;140166;140167;140168;140169;140170;140171;140172;140173;140174;140175;140176;140177;140178;140179;140180;140181;140182;140183;140184;140185;140186;140187;140188;140189;140190 111517;111518;111519;111520;111521;111522;111523;111524;111525;111526;111527;111528;111529;111530;111531;111532;111533;111534;111535;111536;111537;111538;111539;111540;111541;111542;111543;111544;111545;111546;111547;111548 111527 1791 32 FNADEFEDMVAEK Unmodified 1543.6501 0.65007443 1220 P27635 RPL10 60S ribosomal protein L10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 81.83 80.713 2 4.8064E-20 93879 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 156.51 141.24 797190000 59703000 526580000 9726600 5921100 7811300 12083000 3915500 16362000 8583200 16732000 18832000 27889000 14324000 17909000 50817000 16748 1220 15234 140191;140192;140193;140194;140195;140196;140197;140198;140199;140200;140201;140202;140203;140204;140205;140206 111549;111550;111551;111552;111553;111554;111555;111556;111557;111558;111559;111560;111561;111562;111563;111564 111562 16 FNAHGDANTIVCNSK Unmodified 1646.7471 0.74710314 881 P09382 LGALS1 Galectin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.83 3.5 4 1 13 2 1 2 1 1 1 1 2 2 1 2 2 34.554 33.362 2;3 2.6268E-113 36026 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 203.87 179.53 427750000 43133000 5144300 14516000 5571500 0 11279000 0 6675200 0 11874000 69901000 60013000 0 42484000 157160000 16749 881 15235 140207;140208;140209;140210;140211;140212;140213;140214;140215;140216;140217;140218;140219;140220;140221;140222;140223;140224 111565;111566;111567;111568;111569;111570;111571;111572;111573;111574;111575;111576;111577;111578;111579;111580 111579 16 FNALFAQGNYSEAAK Unmodified 1629.7787 0.77872084 2040 Q00610 CLTC Clathrin heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.39 3.7 5 1 12 1 4 1 1 1 1 1 1 1 1 1 1 1 1 1 72.478 71.045 2 9.3331E-40 91574 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 176.78 150.66 2410400000 846250000 895900000 49187000 0 28973000 50641000 37198000 32561000 27853000 56366000 67640000 77862000 41362000 51614000 146960000 16750 2040 15236 140225;140226;140227;140228;140229;140230;140231;140232;140233;140234;140235;140236;140237;140238;140239;140240;140241;140242 111581;111582;111583;111584;111585;111586;111587;111588;111589;111590;111591;111592;111593;111594;111595;111596;111597;111598;111599;111600;111601 111593 21 FNDALTVVER Unmodified 1162.5982 0.59823728 3963 Q96QU8 XPO6 Exportin-6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 62.263 62.293 2 0.0084928 70393 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.908 36.588 6873300 0 0 0 0 1450200 0 0 0 0 0 0 0 0 0 5423000 16751 3963 15237 140243;140244;140245 111602;111603;111604 111602 3 FNDEHIPESPYLVPVIAPSDDAR Unmodified 2580.2496 0.24963234 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS 10 0 1 1 85.252 85.421 3 6.2604E-14 98680 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.797 72.699 8359800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8359800 16752 487 15238 140246 111605;111606 111605 2 FNDFDHRER Unmodified 1234.5479 0.54793304 4697 Q9NWH9 SLTM SAFB-like transcription modulator yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 16.072 16.167 3 0.036764 14642 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.511 26.299 33085000 0 0 0 2595100 1437600 3962500 3445100 0 3036900 0 0 0 7320300 4212700 7074600 16753 4697 15239 140247;140248;140249;140250;140251;140252;140253;140254 111607 111607 1 FNDILGR Unmodified 833.43955 0.43955179 1964 P68400;Q8NEV1 CSNK2A1;CSNK2A3 Casein kinase II subunit alpha;Casein kinase II subunit alpha 3 yes no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 49.781 49.955 2 0.019328 55168 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.34 63.571 181200000 0 0 0 8765700 7018600 0 0 12269000 9172800 12138000 30399000 22116000 18381000 18591000 42348000 16754 1964 15240 140255;140256;140257;140258;140259;140260;140261;140262;140263;140264 111608;111609;111610;111611;111612;111613;111614 111610 7 FNDPHVK Unmodified 855.4239 0.42390173 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14.814 14.25 2 0.017394 17761 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 128.86 106.24 514260000 32102000 140810000 182360000 5895300 8446300 9155300 8671500 8078800 6470500 17502000 13356000 17192000 19634000 18210000 26378000 16755 528 15241 140265;140266;140267;140268;140269;140270;140271;140272;140273;140274;140275;140276;140277;140278;140279 111615;111616;111617;111618;111619;111620;111621 111620 7 FNDQDIEEIVK Unmodified 1348.6511 0.65106071 3618 Q92541 RTF1 RNA polymerase-associated protein RTF1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 76.263 75.121 2 1.6957E-07 92953 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.31 106.54 966220000 20059000 720880000 4149900 10335000 9825900 23967000 13293000 16996000 17134000 18917000 20570000 26850000 13468000 14793000 34983000 16756 3618 15242 140280;140281;140282;140283;140284;140285;140286;140287;140288;140289;140290;140291;140292;140293;140294;140295 111622;111623;111624;111625;111626;111627;111628;111629;111630;111631;111632;111633 111623 10 FNDYFEFPRELDMEPYTVAGVAK Unmodified 2737.2734 0.27340425 3701 Q93008 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 96.323 90.63 3 1.81E-13 114924 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.267 73.42 29670000 27655000 2015000 0 0 0 0 0 0 0 0 0 0 0 0 0 16757 3701 15243 140296;140297 111634;111635 111635 2 FNECGHVLYADIK Unmodified 1564.7344 0.73441319 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 59.671 58.841 3 0.0011844 74290 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 79.089 59.335 155370000 10601000 0 30076000 3962500 4331000 8496600 0 7489800 12130000 7200400 10530000 18250000 12425000 11593000 18286000 16758 1681 15244 140298;140299;140300;140301;140302;140303;140304;140305;140306;140307;140308;140309;140310 111636;111637;111638;111639;111640;111641;111642 111640 5 FNEEHIPDSPFVVPVASPSGDAR Unmodified 2466.1816 0.18155278 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.39 3.7 5 1 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 83.815 82.824 3 2.219E-20 95569 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.211 82.684 577450000 7939900 130530000 10286000 2932900 6526900 26497000 4724900 16266000 13013000 31129000 37706000 38354000 15528000 38598000 197420000 16759 1124 15245 140311;140312;140313;140314;140315;140316;140317;140318;140319;140320;140321;140322;140323;140324;140325;140326;140327;140328 111643;111644;111645;111646;111647;111648;111649;111650;111651;111652;111653;111654;111655;111656;111657;111658;111659;111660;111661 111647 19 FNEEHIPDSPFVVPVASPSGDARR Unmodified 2622.2827 0.28266381 1124 P21333 FLNA Filamin-A yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 79.018 79.142 4 0.010345 91265 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 17.931 14.337 27082000 0 0 0 0 0 3673500 0 0 0 0 0 0 0 0 23408000 16760 1124 15246 140329;140330 111662 111662 1 FNEENYGVK Unmodified 1098.4982 0.49818889 3576 Q8WWM7 ATXN2L Ataxin-2-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 34.07 33.485 2 0.0005968 42096 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 148.04 128.48 322890000 0 107820000 0 9818800 15138000 13310000 15208000 15184000 12645000 21214000 28020000 26448000 28517000 0 29565000 16761 3576 15247 140331;140332;140333;140334;140335;140336;140337;140338;140339;140340;140341;140342;140343 111663;111664;111665;111666;111667;111668;111669;111670;111671;111672 111667 4 FNEGERVRTELADK Unmodified 1662.8325 0.83254733 1356 P35579 MYH9 Myosin-9 yes yes 0 0 2 By MS/MS 1.5 0.5 1 1 2 78.195 77.088 3 0.0051895 95536 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 84.759 48.467 144930000 144930000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16762 1356 15248 140344;140345 111673;111674 111673 2 FNEGVSNAVR Unmodified 1091.536 0.53597137 3559 Q8WVB6 CHTF18 Chromosome transmission fidelity protein 18 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 32.318 32.456 2 0.0012029 35816 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 108.81 99.593 121760000 0 0 0 7113700 7603200 6915000 10096000 12835000 5872800 13562000 14472000 0 15325000 9643000 18321000 16763 3559 15249 140346;140347;140348;140349;140350;140351;140352;140353;140354;140355;140356 111675;111676;111677;111678;111679;111680;111681;111682;111683;111684;111685 111685 9 FNEQIEPIYALLR Unmodified 1604.8562 0.85624288 1241 P29083 GTF2E1 General transcription factor IIE subunit 1 yes yes 0 0 0 By MS/MS 10 0 1 1 93.472 93.614 2 0.012516 108478 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.001 35.341 1616500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1616500 16764 1241 15250 140357 111686;111687 111686 2 FNETQIK Unmodified 878.44978 0.44978213 2224 Q13017 ARHGAP5 Rho GTPase-activating protein 5 yes yes 0 0 0 By MS/MS 2 0 1 1 28.541 24.194 2 0.031699 31915 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.35 34.796 42858000 0 42858000 0 0 0 0 0 0 0 0 0 0 0 0 0 16765 2224 15251 140358 111688 111688 1 FNEVAAQYSEDK Unmodified 1399.6256 0.62557424 5079 Q9Y237 PIN4 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 39.652 39.365 2 0.0014785 42958 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 67.548 54.195 101930000 0 14895000 0 0 3619600 0 4054900 5125600 3123800 5377300 15061000 8064600 0 10566000 32043000 16766 5079 15252 140359;140360;140361;140362;140363;140364;140365;140366;140367;140368 111689;111690;111691;111692;111693;111694;111695;111696;111697 111695 9 FNEVVSVLK Unmodified 1033.5808 0.5807963 5014 Q9UM54 MYO6 Unconventional myosin-VI yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67.704 67.219 2 0.0039296 77085 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 99.442 69.257 75444000 0 5857000 8226600 3318100 3519700 6685700 4890400 3916300 4104400 5681300 6776800 7548300 4321000 3617700 6980300 16767 5014 15253 140369;140370;140371;140372;140373;140374;140375;140376;140377;140378;140379;140380;140381;140382 111698;111699;111700;111701;111702;111703;111704;111705;111706;111707;111708;111709;111710 111698 12 FNFESFPESPGEK Unmodified 1513.6725 0.67252444 3951 Q96Q05 TRAPPC9 Trafficking protein particle complex subunit 9 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 79.892 75.85 2 0.014321 91146 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 55.718 40.452 61174000 0 61174000 0 0 0 0 0 0 0 0 0 0 0 0 0 16768 3951 15254 140383;140384 111711 111711 1 FNFGEEEFK Unmodified 1145.5029 0.50293991 3608 Q92499 DDX1 ATP-dependent RNA helicase DDX1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 70.472 69.274 2 0.00045211 87976 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.98 107.6 1398400000 52535000 837310000 52727000 20526000 29227000 36692000 35658000 31143000 26714000 39424000 44602000 43762000 27359000 35141000 85589000 16769 3608 15255 140385;140386;140387;140388;140389;140390;140391;140392;140393;140394;140395;140396;140397;140398;140399;140400 111712;111713;111714;111715;111716;111717;111718;111719;111720;111721;111722;111723;111724;111725;111726;111727;111728;111729 111716 16 FNFLEQAFDK Unmodified 1257.603 0.60298831 3789 Q96CX2 KCTD12 BTB/POZ domain-containing protein KCTD12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 90.98 85.818 2 0.0041862 108880 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 106.6 94.311 56602000 26137000 28856000 1608900 0 0 0 0 0 0 0 0 0 0 0 0 16770 3789 15256 140401;140402;140403 111730;111731 111731 2 FNFQGYSQDK Unmodified 1232.5462 0.54620171 3246 Q8IWV7 UBR1 E3 ubiquitin-protein ligase UBR1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 58.204 51.18 2 0.0063543 66433 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.168 73.163 28675000 10003000 18672000 0 0 0 0 0 0 0 0 0 0 0 0 0 16771 3246 15257 140404;140405 111732 111732 1 FNFQQTNEDELSFSK Unmodified 1832.8217 0.82170787 2379 Q14155 ARHGEF7 Rho guanine nucleotide exchange factor 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 78.746 75.175 2 1.6423E-44 93197 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 153.74 139.48 52804000 0 49377000 3426400 0 0 0 0 0 0 0 0 0 0 0 0 16772 2379 15258 140406;140407;140408;140409 111733;111734;111735 111733 3 FNFSGSK Unmodified 785.3708 0.37080353 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.749 30.938 2 0.019157 32392 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.63 50.275 330760000 0 0 0 32265000 14846000 16536000 26146000 30656000 19742000 23734000 22966000 39598000 40471000 27063000 36737000 16773 2172 15259 140410;140411;140412;140413;140414;140415;140416;140417;140418;140419;140420;140421 111736;111737;111738;111739;111740;111741;111742;111743;111744 111737 8 FNGEDIDTISPTLGFNIK Unmodified 1979.984 0.98402217 1370 P36404 ARL2 ADP-ribosylation factor-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 88.993 89.121 2 1.3895E-05 103142 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.958 67.352 4977500 0 0 0 0 0 0 0 0 0 2026000 0 0 0 0 2951500 16774 1370 15260 140422;140423 111745 111745 1 FNGSHVVGSPFK Unmodified 1274.6408 0.6407708 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 55.216 49.244 2;3 2.3899E-16 67242 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 203.8 164.78 116000000 62392000 41786000 11827000 0 0 0 0 0 0 0 0 0 0 0 0 16775 487 15261 140424;140425;140426 111746;111747;111748 111747 2 FNGTHIPGSPFK Unmodified 1300.6564 0.65642086 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.62 3.02 5 24 2 2 1 2 2 2 2 2 2 2 2 2 2 2 2 59.922 58.907 2;3 0.00030054 78604 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.806 50.434 1171300000 471330000 118190000 19584000 32570000 18214000 46249000 36753000 37994000 25502000 47372000 62135000 52761000 39159000 43494000 119950000 16776 1124 15262 140427;140428;140429;140430;140431;140432;140433;140434;140435;140436;140437;140438;140439;140440;140441;140442;140443;140444;140445;140446;140447;140448;140449;140450;140451;140452;140453;140454;140455 111749;111750;111751;111752;111753;111754;111755;111756;111757;111758 111751 5 FNHDGEEEEEDDDYGSR Unmodified 2041.741 0.74095094 2960 Q6PJT7 ZC3H14 Zinc finger CCCH domain-containing protein 14 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 22.997 23.372 3 0.037436 24567 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 31.818 31.818 8345100 0 0 0 0 0 0 1157700 0 0 0 1791600 0 2484100 0 2911700 16777 2960 15263 140456;140457;140458;140459 111759 111759 0 FNHPEQAR Unmodified 997.47298 0.47297719 378;396 O43896;O60333;Q12756 KIF1C;KIF1B;KIF1A Kinesin-like protein KIF1C;Kinesin-like protein KIF1B;Kinesin-like protein KIF1A no no 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 7.7106 7.9887 2 0.02755 5340 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 57.281 47.37 15212000 0 0 0 0 0 0 0 0 0 0 11399000 0 0 3812700 0 16778 378;396 15264 140460;140461 111760;111761 111761 2 FNHWELK Unmodified 972.48175 0.48175096 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 42.758 42.997 2 0.023389 48351 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 87.754 66.008 97038000 0 0 0 0 0 12278000 2993100 7860800 8465200 9582000 0 0 15571000 0 40287000 16779 848 15265 140462;140463;140464;140465;140466;140467;140468 111762;111763;111764 111762 3 FNIDGNNERPSPPPNVDYPLDGEK Unmodified 2683.2514 0.25142326 4759 Q9NZ32 ACTR10 Actin-related protein 10 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 74.506 74.121 3 2.5043E-12 85156 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.052 57.994 34249000 0 0 6620800 0 0 0 0 0 0 5532000 0 5716500 0 4602700 11777000 16780 4759 15266 140469;140470;140471;140472;140473 111765;111766;111767;111768;111769;111770 111766 6 FNIENIDGPHSK Unmodified 1369.6626 0.66262845 3348 Q8N5I9 C12orf45 Uncharacterized protein C12orf45 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 51.995 52.288 3 0.005549 58309 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.585 40.072 152530000 0 0 0 0 0 13265000 6975900 8383500 8047400 16287000 18619000 22230000 18158000 14668000 25895000 16781 3348 15267 140474;140475;140476;140477;140478;140479;140480;140481;140482;140483 111771;111772;111773;111774;111775;111776;111777 111777 5 FNILGTHTK Unmodified 1029.5607 0.56072956 1448 P42224 STAT1 Signal transducer and activator of transcription 1-alpha/beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 48.334 47.587 2 0.0052017 51527 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.455 58.495 73693000 19904000 0 0 0 2796200 10597000 4797500 0 0 5837900 5090000 0 6876200 8476500 9317800 16782 1448 15268 140484;140485;140486;140487;140488;140489;140490;140491;140492;140493 111778;111779;111780;111781;111782;111783;111784;111785;111786 111781 9 FNILGTNTK Unmodified 1006.5447 0.54474515 1419 P40763 STAT3 Signal transducer and activator of transcription 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.36 3.15 2 1 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60.491 59.386 2 3.84E-06 80274 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 174.52 104.52 419310000 166330000 15370000 25801000 11595000 8567900 0 13332000 10914000 12878000 22342000 25654000 15694000 22662000 25580000 42588000 16783 1419 15269 140494;140495;140496;140497;140498;140499;140500;140501;140502;140503;140504;140505;140506;140507 111787;111788;111789;111790;111791;111792;111793;111794;111795;111796;111797 111792 8 FNIPDLK Unmodified 845.4647 0.46470391 1122 P21283 ATP6V1C1 V-type proton ATPase subunit C 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 74.213 73.066 2 0.022033 93575 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 108.24 79.984 545170000 60979000 358000000 28207000 4348800 4086100 9216300 5086900 5670700 6614000 9767000 10169000 8423800 7559300 9976500 17067000 16784 1122 15270 140508;140509;140510;140511;140512;140513;140514;140515;140516;140517;140518;140519;140520;140521;140522;140523 111798;111799;111800;111801;111802;111803;111804;111805;111806;111807;111808;111809;111810;111811;111812 111805 15 FNISNGGPAPEAITDK Unmodified 1629.7999 0.79985021 1380 P36871 PGM1 Phosphoglucomutase-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.42 3.9 1 4 2 5 2 4 1 1 2 1 1 70.866 68.472 2;3 3.1828E-71 73350 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 181.67 155.73 2700100000 109360000 2321700000 23367000 0 0 0 0 0 0 8947300 49395000 44644000 0 0 142680000 16785 1380 15271 140524;140525;140526;140527;140528;140529;140530;140531;140532;140533;140534;140535 111813;111814;111815;111816;111817;111818;111819;111820;111821;111822;111823;111824;111825 111816 13 FNISSHNQSPK Unmodified 1257.6102 0.61019895 4345 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.362 22.566 3 0.00058423 23381 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 76.332 56.57 153220000 0 0 0 7752600 6256700 11040000 7963400 9386000 6309000 12922000 17282000 25180000 13299000 11832000 23998000 16786 4345 15272 140536;140537;140538;140539;140540;140541;140542;140543;140544;140545;140546;140547 111826;111827;111828;111829;111830;111831;111832;111833;111834;111835 111826 9 FNITPNK Unmodified 832.4443 0.44430282 3463 Q8NI08 NCOA7 Nuclear receptor coactivator 7 yes yes 0 0 0 By MS/MS 2 0 1 1 42.436 35.7 2 0.022419 48983 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.22 79.905 25882000 25882000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16787 3463 15273 140548 111836;111837 111837 2 FNLDLYPDATEGDLYTDMSK Oxidation (M) 2323.0202 0.020209259 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 86.334 86.475 2 2.0364E-09 100022 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.262 70.482 17733000 0 0 0 0 0 0 0 0 0 4468900 3209500 3830400 0 1384000 4839900 16788 3023 15274 140549;140550;140551;140552;140553 111838;111839;111840;111841 111839 4626 4 FNLLREENEGYAK Unmodified 1581.7787 0.77872084 3465 Q8NI27 THOC2 THO complex subunit 2 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 57.786 57.132 3 0.0017196 63972 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 58.098 38.344 144260000 34231000 0 0 0 0 11097000 0 0 11061000 13427000 12173000 12250000 11902000 13150000 24967000 16789 3465 15275 140554;140555;140556;140557;140558;140559;140560;140561;140562 111842;111843;111844;111845;111846;111847;111848 111846 5 FNLMQVGR Oxidation (M) 979.49094 0.49093544 2463 Q14C86 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 51.885 52.004 2 0.010402 58693 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 68.312 39.414 171520000 0 0 0 11457000 11539000 24367000 11580000 0 11900000 17538000 0 25241000 19345000 14315000 24238000 16790 2463 15276 140563;140564;140565;140566;140567;140568;140569;140570;140571;140572 111849;111850;111851;111852;111853;111854;111855;111856;111857;111858 111850 4053 10 FNLMQVGR Unmodified 963.49602 0.49602082 2463 Q14C86 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.397 68.476 2 0.012531 77708 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 74.423 59.759 96574000 0 0 0 6134300 5105900 9270600 4415600 6571400 5069000 8929000 9477400 7763100 7086300 7990500 18761000 16791 2463 15276 140573;140574;140575;140576;140577;140578;140579;140580;140581;140582;140583;140584 111859;111860;111861;111862;111863;111864 111863 6 FNLSFPPSEIISPEK Unmodified 1703.877 0.8770379 4490 Q9HAU5 UPF2 Regulator of nonsense transcripts 2 yes yes 0 0 0 By MS/MS 2 0 1 1 95.109 90.245 2 0.031155 111966 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 54.871 39.605 14654000 0 14654000 0 0 0 0 0 0 0 0 0 0 0 0 0 16792 4490 15277 140585 111865 111865 1 FNLTGLNEQVPHYR Unmodified 1686.8478 0.84780346 1956 P67870 CSNK2B Casein kinase II subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 1 1 2 74.561 74.648 2;3 0.00019627 85206 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 78.763 67.658 275630000 0 0 0 3632900 4628800 19611000 6102800 17396000 17712000 21088000 19291000 23098000 14895000 17960000 110220000 16793 1956 15278 140586;140587;140588;140589;140590;140591;140592;140593;140594;140595;140596;140597;140598 111866;111867;111868;111869;111870;111871;111872;111873;111874;111875;111876;111877;111878 111875 11 FNLTYVSHDGDDK Unmodified 1509.6736 0.67358707 1209 P26639 TARS Threonine--tRNA ligase, cytoplasmic yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 2 1 2 2 51.723 52.163 2;3 0.0089079 58004 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.806 49.727 189470000 0 0 0 0 0 0 0 2924400 0 0 27488000 16991000 0 22973000 119090000 16794 1209 15279 140599;140600;140601;140602;140603;140604;140605;140606 111879;111880 111879 1 FNNDSHSPK Unmodified 1044.4625 0.46247208 3248 Q8IWW6 ARHGAP12 Rho GTPase-activating protein 12 yes yes 0 0 0 By MS/MS 2 0 1 1 5.9845 3.7669 2 0.017714 5496 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 78.516 60.481 10361000 0 0 10361000 0 0 0 0 0 0 0 0 0 0 0 0 16795 3248 15280 140607 111881 111881 1 FNPDIFSPGVR Unmodified 1247.6299 0.62987176 465 O75153 CLUH Clustered mitochondria protein homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 78.297 78.404 2 0.0040978 90133 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.303 46.105 76564000 0 0 0 0 2963800 5944500 2445800 3619300 3009800 6546300 9147700 9661100 4126300 8159200 20940000 16796 465 15281 140608;140609;140610;140611;140612;140613;140614;140615;140616;140617;140618 111882;111883;111884;111885;111886;111887 111884 6 FNPETDYLTGTDGK Unmodified 1556.6995 0.69946747 4061 Q99798 ACO2 Aconitate hydratase, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 65.921 60.004 2 0.002326 76679 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.667 72.402 154690000 0 154690000 0 0 0 0 0 0 0 0 0 0 0 0 0 16797 4061 15282 140619 111888;111889 111888 2 FNPETDYLTGTDGKK Unmodified 1684.7944 0.79443049 4061 Q99798 ACO2 Aconitate hydratase, mitochondrial yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 58.54 53.201 3 0.0092176 68424 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 43.408 36.971 41698000 0 41698000 0 0 0 0 0 0 0 0 0 0 0 0 0 16798 4061 15283 140620;140621 111890 111890 0 FNPFVTSDR Unmodified 1081.5193 0.51925868 1843 P61254;Q9UNX3 RPL26;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.441 60.546 2 0.000169 68082 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 149.65 130.87 2147000000 0 0 0 109100000 113590000 141900000 162450000 127780000 158530000 202760000 240070000 280100000 189220000 170010000 251520000 16799 1843 15284 140622;140623;140624;140625;140626;140627;140628;140629;140630;140631;140632;140633 111891;111892;111893;111894;111895;111896;111897;111898;111899;111900;111901;111902;111903;111904 111899 14 FNPFVTSDRSK Unmodified 1296.6463 0.64625011 1843 P61254;Q9UNX3 RPL26;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 yes no 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 57.465 50.451 3 0.0019552 68449 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 118.28 106.01 218600000 194810000 23793000 0 0 0 0 0 0 0 0 0 0 0 0 0 16800 1843 15285 140634;140635 111905;111906 111906 0 FNPGELR Unmodified 831.4239 0.42390173 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.692 40.87 2 0.023336 45611 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 90.661 59.993 208210000 0 0 0 9892100 15073000 14336000 14160000 16144000 9488900 19113000 18560000 30182000 21411000 19062000 20791000 16801 213 15286 140636;140637;140638;140639;140640;140641;140642;140643;140644;140645;140646;140647 111907;111908;111909 111908 3 FNPNFYR Unmodified 956.45045 0.45045083 4443 Q9H832 UBE2Z Ubiquitin-conjugating enzyme E2 Z yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 52.13 52.193 2 0.015385 58956 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 118.06 108.59 165250000 0 0 0 6837200 7916700 34404000 12666000 13327000 8011800 26526000 0 0 14462000 13055000 28042000 16802 4443 15287 140648;140649;140650;140651;140652;140653;140654;140655;140656;140657 111910;111911;111912;111913;111914;111915;111916;111917;111918;111919;111920 111911 11 FNPPTGTDTMVK Unmodified 1306.6227 0.62273747 1707 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 2 1 1 1 1 1 1 1 51.755 51.904 2 3.6812E-05 57551 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 90.906 78.68 374420000 0 0 0 16489000 20084000 21754000 25830000 31877000 22455000 31660000 35674000 43796000 29283000 35432000 60092000 16803 1707 15288 140658;140659;140660;140661;140662;140663;140664;140665;140666;140667;140668;140669;140670 111921;111922;111923;111924;111925;111926;111927;111928;111929;111930;111931;111932;111933;111934;111935;111936;111937;111938;111939;111940 111935 20 FNPPTGTDTMVK Oxidation (M) 1322.6177 0.61765209 1707 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 40.956 40.682 2 1.2357E-05 44530 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 105.2 94.964 307080000 0 27710000 0 0 21354000 0 32158000 23990000 0 34329000 34728000 43881000 31629000 25998000 31307000 16804 1707 15288 140671;140672;140673;140674;140675;140676;140677;140678;140679;140680 111941;111942;111943;111944;111945;111946;111947;111948;111949;111950;111951;111952 111944 2755 11 FNQAQSGNIQSTVMLDK Oxidation (M) 1895.9047 0.90472599 1448 P42224 STAT1 Signal transducer and activator of transcription 1-alpha/beta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 56.138 56.241 2 4.2462E-06 63192 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 66.498 57.985 10819000 0 0 0 0 0 4039900 2113900 0 0 4665600 0 0 0 0 0 16805 1448 15289 140681;140682;140683;140684 111953;111954;111955 111955 2281 3 FNQAQSGNIQSTVMLDK Unmodified 1879.9098 0.90981137 1448 P42224 STAT1 Signal transducer and activator of transcription 1-alpha/beta yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 63.09 63.457 2 7.9881E-25 71780 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 133.32 125.22 10360000 0 0 0 0 0 0 0 0 0 0 0 0 3029000 0 7330500 16806 1448 15289 140685;140686 111956 111956 1 FNQCGTCNEFK Unmodified 1403.5598 0.55981964 4853 Q9UBR2 CTSZ Cathepsin Z yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 35.65 30.955 2 6.6618E-45 40665 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 209.6 185.64 133520000 0 133520000 0 0 0 0 0 0 0 0 0 0 0 0 0 16807 4853 15290 140687;140688 111957 111957 1 FNQGMVDTAK Oxidation (M) 1125.5125 0.51245874 2983 Q6UXH1 CRELD2 Cysteine-rich with EGF-like domain protein 2 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 22.272 18.386 2 0.010232 24100 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.607 59.817 41417000 0 41417000 0 0 0 0 0 0 0 0 0 0 0 0 0 16808 2983 15291 140689;140690 111958 111958 4598 1 FNQGMVDTAK Unmodified 1109.5175 0.51754412 2983 Q6UXH1 CRELD2 Cysteine-rich with EGF-like domain protein 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.12 3.72 2 1 5 1 2 1 1 1 1 1 32.492 31.412 2 0.0027765 40041 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.84 52.92 282980000 0 239070000 0 1161000 0 0 0 0 0 0 8982000 17854000 0 4737600 11179000 16809 2983 15291 140691;140692;140693;140694;140695;140696;140697;140698 111959;111960;111961;111962 111959 4 FNQMVVK Unmodified 864.45276 0.45275902 2296 Q13464 ROCK1 Rho-associated protein kinase 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 41.14 35.246 2 0.031344 46190 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.703 65.908 58479000 13717000 44761000 0 0 0 0 0 0 0 0 0 0 0 0 0 16810 2296 15292 140699;140700 111963;111964 111963 2 FNQNRPWSETIK Unmodified 1518.7579 0.75792582 2558 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 48.197 48.344 3 0.01877 55414 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 27.967 16.258 98218000 0 0 0 5824900 2794600 8676400 5927900 9755200 7675400 13420000 12099000 9359800 0 6090800 16594000 16811 2558 15293 140701;140702;140703;140704;140705;140706;140707;140708;140709;140710;140711 111965;111966 111966 2 FNQTYQLAHGTAEEK Unmodified 1735.8166 0.81656291 2384 Q14166 TTLL12 Tubulin--tyrosine ligase-like protein 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.5 3.61 6 1 3 2 3 2 1 1 1 41.7 37.849 2;3 1.5276E-166 51509 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 253.88 215.31 2376200000 831580000 998390000 466050000 0 0 0 0 0 0 0 0 24527000 0 0 55688000 16812 2384 15294 140712;140713;140714;140715;140716;140717;140718;140719;140720;140721 111967;111968;111969;111970;111971;111972;111973;111974 111971 6 FNQVESDK Unmodified 965.44543 0.44542503 2177 Q10471 GALNT2 Polypeptide N-acetylgalactosaminyltransferase 2;Polypeptide N-acetylgalactosaminyltransferase 2 soluble form yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.501 11.639 2 0.0043249 9575 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 111.82 85.214 128040000 0 0 0 5616000 7465300 9432900 13060000 9452100 8919600 13290000 12127000 18877000 12526000 0 17277000 16813 2177 15295 140722;140723;140724;140725;140726;140727;140728;140729;140730;140731;140732 111975;111976;111977;111978;111979;111980;111981;111982;111983;111984 111979 7 FNQVLDQFGEK Unmodified 1323.6459 0.64591575 308 O43242 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 67.647 66.335 2 1.0031E-27 75751 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 206.43 188.12 1174300000 46331000 538880000 21248000 30608000 48620000 55015000 15496000 17825000 10538000 91763000 80808000 129170000 13846000 21295000 52829000 16814 308 15296 140733;140734;140735;140736;140737;140738;140739;140740;140741;140742;140743;140744;140745;140746;140747;140748 111985;111986;111987;111988;111989;111990;111991;111992;111993;111994;111995;111996;111997;111998;111999;112000;112001;112002;112003;112004;112005 112002 18 FNQVLGDDEK Unmodified 1163.5459 0.54586736 2647 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 36.939 35.993 2 1.0461E-10 45642 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 169.12 141.87 413790000 10604000 191460000 0 10107000 8281200 22559000 11984000 15524000 12896000 20351000 19179000 21788000 21915000 20281000 26863000 16815 2647 15297 140749;140750;140751;140752;140753;140754;140755;140756;140757;140758;140759;140760;140761;140762;140763 112006;112007;112008;112009;112010;112011;112012;112013;112014;112015;112016;112017;112018;112019;112020;112021;112022;112023;112024;112025 112009 16 FNSLFSLR Unmodified 982.52362 0.52361577 4183 Q9BVC3 DSCC1 Sister chromatid cohesion protein DCC1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.059 79.156 2 0.0048901 91513 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 133.6 93.937 56167000 0 0 0 0 2647000 7025900 3133300 3730300 0 4867800 4812800 7900200 6612200 4682900 10754000 16816 4183 15298 140764;140765;140766;140767;140768;140769;140770;140771;140772;140773;140774 112026;112027;112028;112029;112030;112031;112032;112033;112034;112035;112036 112035 11 FNSLNELVDYHR Unmodified 1505.7263 0.72629134 1934 P62993 GRB2 Growth factor receptor-bound protein 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 72.009 72.227 3 0.024528 83048 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 35.204 29.48 54475000 0 0 0 0 0 0 2147900 3105100 4489000 4413800 4626500 8487500 0 5850800 21354000 16817 1934 15299 140775;140776;140777;140778;140779;140780;140781;140782 112037 112037 1 FNSLPQYSPVTFDRK Unmodified 1797.905 0.90498399 3598 Q8WY36 BBX HMG box transcription factor BBX yes yes 0 0 1 By MS/MS 10 0 1 1 73.359 73.729 3 0.00012219 84398 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.038 61.07 13248000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13248000 16818 3598 15300 140783 112038;112039 112038 2 FNSQPVGDCDFNVR Unmodified 1653.7206 0.72055404 450 O60942 RNGTT mRNA-capping enzyme;Polynucleotide 5'-triphosphatase;mRNA guanylyltransferase yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 59.923 60.115 2 0.00065586 68955 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 79.82 50.015 43761000 0 0 0 0 0 0 0 0 0 0 0 0 18632000 25129000 0 16819 450 15301 140784;140785 112040;112041 112041 2 FNTANDDNVTQVR Unmodified 1492.6906 0.69063412 768 P04040 CAT Catalase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.47 37.65 2 6.2057E-16 41547 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 149.23 139 350900000 0 0 0 51326000 16056000 24177000 14542000 70575000 14011000 29004000 28248000 35574000 33158000 15611000 18619000 16820 768 15302 140786;140787;140788;140789;140790;140791;140792;140793;140794;140795;140796;140797 112042;112043;112044;112045;112046;112047;112048;112049;112050;112051;112052;112053;112054 112046 11 FNTDAAEFIPQEK Unmodified 1508.7147 0.7147236 2221 Q12986 NFX1 Transcriptional repressor NF-X1 yes yes 0 0 0 By MS/MS By MS/MS 5 3.56 1 1 1 2 1 77.233 73.106 2 0.0020892 91189 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.002 65.858 101100000 0 101100000 0 0 0 0 0 0 0 0 0 0 0 0 0 16821 2221 15303 140798;140799;140800 112055;112056 112055 2 FNTLFAQGSYAEAAK Unmodified 1616.7835 0.78347187 1723 P53675 CLTCL1 Clathrin heavy chain 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 78.841 72.408 2 1.1472E-10 91952 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.43 96.84 34806000 15143000 19664000 0 0 0 0 0 0 0 0 0 0 0 0 0 16822 1723 15304 140801;140802 112057;112058 112057 2 FNTPALK Unmodified 789.43849 0.43848916 1740 P54577 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.69 2 2 6 2 2 1 1 1 1 1 1 44.626 42.25 2 0.01947 57745 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 114.19 58.16 3027600000 1134400000 1777100000 0 10785000 11993000 20982000 0 0 0 18034000 29664000 0 0 24642000 0 16823 1740 15305 140803;140804;140805;140806;140807;140808;140809;140810;140811;140812 112059;112060;112061;112062;112063;112064;112065;112066 112065 8 FNTPQQPK Unmodified 958.48723 0.48723027 4636 Q9NTK5 OLA1 Obg-like ATPase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 6.12 3.89 3 1 4 1 2 1 1 1 1 1 25.281 23.293 2 0.004618 24076 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 130.77 110.21 860930000 65435000 706530000 7648700 9723200 0 16865000 0 0 0 0 20346000 0 0 0 34381000 16824 4636 15306 140813;140814;140815;140816;140817;140818;140819;140820 112067;112068;112069;112070;112071;112072;112073;112074;112075;112076;112077;112078;112079 112073 13 FNTTSVIK Unmodified 908.49673 0.49673232 2481 Q15029 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 43.21 41.863 2 0.0047759 46750 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 113.7 85.167 1835300000 329600000 673610000 0 38321000 48235000 56682000 52296000 47139000 45079000 81403000 92330000 106510000 81262000 82223000 100600000 16825 2481 15307 140821;140822;140823;140824;140825;140826;140827;140828;140829;140830;140831;140832;140833;140834;140835;140836 112080;112081;112082;112083;112084;112085;112086;112087;112088;112089;112090;112091;112092;112093;112094;112095 112092 15 FNVDEVPDIEPAALPQPPATEK Unmodified 2376.1849 0.18490682 4356 Q9H211 CDT1 DNA replication factor Cdt1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 86.687 86.79 3 0.0015413 100845 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 32.146 27.619 49586000 0 0 0 0 3862000 3122800 0 4658300 4638900 6819700 6565300 9945400 0 2959000 7015000 16826 4356 15308 140837;140838;140839;140840;140841;140842;140843;140844;140845 112096;112097;112098;112099;112100;112101 112099 6 FNVDEYSDLVTLTK Unmodified 1642.809 0.80901792 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.92 3.94 1 9 3 12 7 5 1 1 1 1 1 1 1 1 1 1 1 1 1 87.454 85.624 2;3 4.6002E-52 103045 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 186.81 161.96 1704600000 142510000 1265700000 43837000 4280900 13118000 23039000 10254000 13714000 16034000 39269000 25301000 25679000 7523900 14280000 60056000 16827 1518 15309 140846;140847;140848;140849;140850;140851;140852;140853;140854;140855;140856;140857;140858;140859;140860;140861;140862;140863;140864;140865;140866;140867;140868;140869;140870 112102;112103;112104;112105;112106;112107;112108;112109;112110;112111;112112;112113;112114;112115;112116;112117;112118;112119;112120;112121;112122;112123;112124;112125 112113 23 FNVEDGEIVQQVR Unmodified 1531.7631 0.76307078 3364 Q8N766 EMC1 ER membrane protein complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 69.967 69.972 2 0.0013371 81056 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 78.655 57.785 30976000 0 0 0 3632300 2820600 0 2617100 3504000 0 6315800 0 5240400 2593600 4252300 0 16828 3364 15310 140871;140872;140873;140874;140875;140876;140877;140878 112126;112127;112128;112129;112130;112131;112132 112131 7 FNVLQYVVPEVK Unmodified 1433.7919 0.79185171 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 92.793 92.945 2 0.00089612 107715 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.377 73.887 12183000 0 0 0 0 0 0 0 1102900 0 2795900 1407300 0 0 1278000 5598500 16829 2378 15311 140879;140880;140881;140882;140883 112133;112134;112135 112134 3 FNVPVSLESK Unmodified 1118.5972 0.59717465 2004 P82979 SARNP SAP domain-containing ribonucleoprotein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.51 71.582 2 0.0015301 83210 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 105.52 105.52 763390000 0 0 0 38672000 42243000 44170000 49545000 40766000 33237000 63488000 105310000 113020000 44339000 69484000 119120000 16830 2004 15312 140884;140885;140886;140887;140888;140889;140890;140891;140892;140893;140894;140895 112136;112137;112138;112139;112140;112141;112142;112143;112144;112145;112146 112145 8 FNVPVSLESKK Unmodified 1246.6921 0.69213767 2004 P82979 SARNP SAP domain-containing ribonucleoprotein yes yes 0 0 1 By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 60.256 60.355 3 0.023743 68731 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 31.478 20.327 85275000 0 0 0 6520900 7203200 2844500 9607600 4998000 0 3780700 10602000 13404000 4824900 8835500 12654000 16831 2004 15313 140896;140897;140898;140899;140900;140901;140902;140903;140904;140905;140906 112147;112148;112149 112147 2 FNVWDTAGQEK Unmodified 1293.599 0.59896556 1912 P62826 RAN GTP-binding nuclear protein Ran yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.85 3.86 7 1 12 2 4 2 1 1 1 1 1 1 1 1 1 1 1 1 63.328 61.479 2 4.0773E-90 70557 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 209.6 188.23 12570000000 413070000 10544000000 130390000 44407000 32269000 46436000 43576000 43366000 33330000 54200000 209860000 197820000 61314000 224770000 490930000 16832 1912 15314 140907;140908;140909;140910;140911;140912;140913;140914;140915;140916;140917;140918;140919;140920;140921;140922;140923;140924;140925;140926 112150;112151;112152;112153;112154;112155;112156;112157;112158;112159;112160;112161;112162;112163;112164;112165;112166;112167;112168;112169;112170;112171;112172;112173;112174;112175;112176;112177;112178;112179;112180;112181;112182;112183;112184;112185;112186 112151 36 FNVWDVGGQDK Unmodified 1263.5884 0.58840088 1897 P62330 ARF6 ADP-ribosylation factor 6 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 76.679 72.514 2 0.02 90445 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 61.958 46.417 126280000 0 126280000 0 0 0 0 0 0 0 0 0 0 0 0 0 16833 1897 15315 140927;140928 112187 112187 1 FNWYVDGVEVHNAK Unmodified 1676.7947 0.79470526 748 P01857 IGHG1 Ig gamma-1 chain C region yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 73.893 73.712 3 0.0010549 84724 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 56.286 51.97 28439000 0 0 0 6199900 0 0 0 22239000 0 0 0 0 0 0 0 16834 748 15316 140929;140930 112188;112189 112188 2 FNYCILDEGHVIK Unmodified 1606.7814 0.78136338 238 O14981 BTAF1 TATA-binding protein-associated factor 172 yes yes 0 0 0 By MS/MS 2 0 1 1 82.532 74.401 3 0.030887 97395 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 20.23 8.9594 13727000 13727000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16835 238 15317 140931 112190 112190 1 FNYGFEYLGVQDK Unmodified 1578.7355 0.73545904 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82.615 81.744 2 1.2844E-07 94832 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 116.77 94.68 115660000 11146000 3676200 2910800 1818500 3389600 10352000 3167500 7059800 6673500 10394000 8152000 8624200 3849300 7208700 27237000 16836 2392 15318 140932;140933;140934;140935;140936;140937;140938;140939;140940;140941;140942;140943;140944;140945;140946 112191;112192;112193;112194;112195;112196;112197;112198;112199;112200;112201;112202;112203;112204;112205;112206 112191 15 FNYMAEREDELSLIK Unmodified 1856.8978 0.8978497 1035 P16333 NCK1 Cytoplasmic protein NCK1 yes yes 0 0 1 By MS/MS 2 0 1 1 83.75 75.619 3 0.00029526 98847 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.599 47.019 9427500 9427500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16837 1035 15319 140947 112207 112207 1 FNYSGSGGR Unmodified 943.41479 0.41479361 2207 Q12906 ILF3 Interleukin enhancer-binding factor 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.94 19.135 2 0.0051376 18161 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 82.452 72.038 75203000 0 0 0 6082300 4180100 6472800 4866100 3199100 3588700 6650600 6702200 8211600 8391500 6199500 10659000 16838 2207 15320 140948;140949;140950;140951;140952;140953;140954;140955;140956;140957;140958;140959 112208;112209;112210;112211;112212;112213;112214;112215;112216 112213 9 FNYSVQEESDTCLGGK Unmodified 1832.7887 0.78869318 4810 Q9P287 BCCIP BRCA2 and CDKN1A-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By matching 2 0 6 1 4 1 62.395 56.449 2;3 6.9883E-92 72126 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 212.9 205.88 339820000 8524700 328490000 2810700 0 0 0 0 0 0 0 0 0 0 0 0 16839 4810 15321 140960;140961;140962;140963;140964;140965 112217;112218;112219;112220;112221;112222 112217 6 FPAAQAPDPSETPK Unmodified 1454.7042 0.70415892 196 O14639 ABLIM1 Actin-binding LIM protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS 8.4 3.2 1 4 1 1 1 1 1 47.675 46.958 2 1.9184E-44 58450 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 172.8 152.77 43927000 0 26258000 0 0 0 0 0 0 0 0 3142000 6751500 0 3088400 4686300 16840 196 15322 140966;140967;140968;140969;140970 112223;112224;112225 112223 3 FPAGHSVIQLAR Unmodified 1294.7146 0.71460444 4507 Q9HC52 CBX8 Chromobox protein homolog 8 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 59.341 59.607 3 0.026464 67848 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 28.283 24.131 41127000 0 0 0 0 0 5801000 4568900 3597600 3963900 3827600 4073200 6433100 0 0 8862100 16841 4507 15323 140971;140972;140973;140974;140975;140976;140977;140978 112226;112227;112228 112226 3 FPASNISVNDATSSEEK Unmodified 1794.8272 0.82718718 2097 Q03468 ERCC6 DNA excision repair protein ERCC-6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 54.81 54.878 2 5.0265E-36 68146 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.02 101.8 14585000 0 0 0 0 4206400 0 4459500 0 0 0 0 0 0 0 5919200 16842 2097 15324 140979;140980;140981;140982;140983;140984 112229;112230;112231;112232;112233;112234 112230 6 FPAVETR Unmodified 818.42865 0.42865276 5094 Q9Y2A7 NCKAP1 Nck-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.121 35.303 2 0.039725 37897 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 68.915 26.44 166400000 0 0 0 10882000 8352400 16500000 12821000 9375200 6802400 13306000 16171000 12961000 16383000 16659000 26184000 16843 5094 15325 140985;140986;140987;140988;140989;140990;140991;140992;140993;140994;140995;140996 112235 112235 1 FPAVETRNNNQQLAQLQK Unmodified 2098.0919 0.09194991 5094 Q9Y2A7 NCKAP1 Nck-associated protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 66.008 57.713 3 0.020471 77360 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 31.883 26.881 18572000 18572000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16844 5094 15326 140997 112236;112237 112237 2 FPAVGEPNIQQYAQNMGLPQNR Oxidation (M) 2487.1965 0.19649134 271 O15294 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 79.53 79.638 3 6.0856E-14 92078 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 75.533 70.532 60918000 0 0 0 0 5922400 0 4454900 7512600 0 9931100 10109000 9777600 0 0 13210000 16845 271 15327 140998;140999;141000;141001;141002;141003;141004 112238;112239;112240;112241;112242 112238 357 5 FPCTLVAQK Unmodified 1062.5532 0.55320134 4238 Q9BY32 ITPA Inosine triphosphate pyrophosphatase yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 51.702 51.817 2 0.011598 57702 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 62.573 39.682 67729000 0 0 0 8465500 2462000 9594900 0 0 0 0 0 18267000 5966400 6810900 16162000 16846 4238 15328 141005;141006;141007;141008;141009;141010;141011 112243;112244;112245;112246;112247;112248;112249 112245 6 FPDAGEDELLK Unmodified 1232.5925 0.5924832 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 4 2 12 3 2 1 1 1 1 1 1 1 1 1 1 1 1 1 69.329 67.891 2 2.4248E-07 78552 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 144.77 114.6 4160300000 217010000 2972700000 31133000 60699000 57265000 101180000 67724000 53049000 55616000 123040000 86148000 67645000 75431000 72374000 119250000 16847 1518 15329 141012;141013;141014;141015;141016;141017;141018;141019;141020;141021;141022;141023;141024;141025;141026;141027;141028;141029 112250;112251;112252;112253;112254;112255;112256;112257;112258;112259;112260;112261;112262;112263;112264;112265;112266;112267;112268;112269;112270;112271;112272;112273;112274;112275;112276;112277;112278;112279;112280;112281;112282;112283;112284;112285 112251 36 FPDEDEILEK Unmodified 1233.5765 0.57649879 1099 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 4 2 12 3 2 1 1 1 1 1 1 1 1 1 1 1 1 1 67.51 66.047 2 8.6796E-06 85450 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 162.88 108.72 1340100000 104270000 1035800000 13034000 9436000 9479700 17611000 11742000 10174000 13319000 13718000 17606000 24772000 13294000 15831000 29969000 16848 1099 15330 141030;141031;141032;141033;141034;141035;141036;141037;141038;141039;141040;141041;141042;141043;141044;141045;141046;141047 112286;112287;112288;112289;112290;112291;112292;112293;112294;112295;112296;112297;112298 112293 13 FPDEDEILEKDEALEDEDNK Unmodified 2392.0442 0.044175403 1099 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 0 0 1 By MS/MS 2 0 1 1 79.52 71.39 3 1.2352E-58 93799 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 136.33 131.78 15382000 15382000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16849 1099 15331 141048 112299;112300 112300 2 FPDEDEILEKDEALEDEDNKK Unmodified 2520.1391 0.13913842 1099 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 0 0 2 By MS/MS 2 0 2 2 77.225 69.095 3;4 1.4145E-85 90993 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 155.86 152.88 86910000 86910000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16850 1099 15332 141049;141050 112301;112302 112302 2 FPDEDSYQK Unmodified 1127.4771 0.47711909 2988 Q6VY07 PACS1 Phosphofurin acidic cluster sorting protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 35.272 30.516 2 0.01196 39744 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.498 45.706 48493000 0 48493000 0 0 0 0 0 0 0 0 0 0 0 0 0 16851 2988 15333 141051 112303;112304;112305 112304 3 FPDELAHVEK Unmodified 1183.5873 0.58733824 417 O60610 DIAPH1 Protein diaphanous homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 4 12 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 51.991 50.743 2;3 0.0010152 56135 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 91.549 73.73 1438400000 39253000 454020000 379680000 32015000 27614000 65031000 45713000 40926000 42922000 43734000 51268000 56954000 51023000 43371000 64871000 16852 417 15334 141052;141053;141054;141055;141056;141057;141058;141059;141060;141061;141062;141063;141064;141065;141066;141067 112306;112307;112308;112309;112310;112311;112312;112313;112314;112315;112316;112317;112318;112319;112320;112321;112322;112323;112324;112325;112326;112327;112328;112329;112330;112331;112332;112333;112334;112335 112324 28 FPDNPEK Unmodified 845.39193 0.3919329 3600 Q8WYA6 CTNNBL1 Beta-catenin-like protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 25.217 21.047 2 0.02671 28534 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.457 78.611 155650000 0 155650000 0 0 0 0 0 0 0 0 0 0 0 0 0 16853 3600 15335 141068;141069 112336 112336 1 FPDREENAVHSTEPVVQENGDEAGEGR Unmodified 2967.3231 0.32308465 2033 Q00341 HDLBP Vigilin yes yes 0 0 1 By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 2 1 1 1 1 1 46.159 46.417 4 8.6558E-14 51840 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 52.824 50.239 110100000 0 0 0 3592900 0 0 0 10236000 15263000 11620000 11731000 16837000 17035000 0 23787000 16854 2033 15336 141070;141071;141072;141073;141074;141075;141076;141077;141078 112337;112338;112339;112340;112341;112342 112340 5 FPDREENAVHSTEPVVQENGDEAGEGREAK Unmodified 3295.4978 0.49775455 2033 Q00341 HDLBP Vigilin yes yes 0 0 2 By MS/MS By MS/MS 2 0 3 1 2 47.945 42.744 4 5.2931E-50 53912 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 102.57 97.025 52428000 40699000 0 11729000 0 0 0 0 0 0 0 0 0 0 0 0 16855 2033 15337 141079;141080;141081 112343;112344;112345;112346 112345 4 FPDSVEELR Unmodified 1090.5295 0.52948901 2577 Q15785 TOMM34 Mitochondrial import receptor subunit TOM34 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.569 60.674 2 0.0034774 69900 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 106.91 66.844 494070000 0 0 0 32639000 32555000 36111000 46559000 35149000 29596000 44026000 49170000 54287000 33197000 34704000 66072000 16856 2577 15338 141082;141083;141084;141085;141086;141087;141088;141089;141090;141091;141092;141093 112347;112348;112349;112350;112351;112352;112353;112354;112355;112356;112357;112358 112357 11 FPEAPTVK Unmodified 887.47527 0.4752686 591 O94829 IPO13 Importin-13 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 49.173 43.876 2 0.023155 56873 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.716 64.868 46175000 0 46175000 0 0 0 0 0 0 0 0 0 0 0 0 0 16857 591 15339 141094;141095 112359 112359 1 FPEDFDDGEHAK Unmodified 1405.5786 0.57862405 4821 Q9P2K8 EIF2AK4 Eukaryotic translation initiation factor 2-alpha kinase 4 yes yes 0 0 0 By MS/MS 2 0 1 1 47.129 41.566 3 0.02881 54472 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 39.006 39.006 15028000 0 15028000 0 0 0 0 0 0 0 0 0 0 0 0 0 16858 4821 15340 141096 112360 112360 0 FPEFCSSPSPPVEVK Unmodified 1705.8022 0.8021584 2860 Q68E01 INTS3 Integrator complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 77.631 77.014 2 6.6761E-131 94302 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 262.56 234.38 272240000 0 194750000 0 2358600 3495000 0 4529900 4060800 5432200 0 9946700 12733000 7601300 9115500 18211000 16859 2860 15341 141097;141098;141099;141100;141101;141102;141103;141104;141105;141106;141107;141108;141109 112361;112362;112363;112364;112365;112366;112367;112368;112369;112370;112371;112372;112373;112374;112375;112376;112377;112378 112363 18 FPEGPERR Unmodified 986.49338 0.49337828 3693 Q92974 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 20.085 20.329 2 0.040377 20448 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 104.75 60.352 161980000 0 0 0 6848100 0 10797000 8473400 10607000 11689000 16722000 23697000 22238000 20159000 12726000 18018000 16860 3693 15342 141110;141111;141112;141113;141114;141115;141116;141117;141118;141119;141120 112379;112380 112380 0 FPEHELTFDPQR Unmodified 1514.7154 0.7153923 5206 Q9Y4L1 HYOU1 Hypoxia up-regulated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 62.517 62.79 3 0.010207 71612 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 32.567 26.362 67752000 0 0 0 0 0 8218700 0 0 3484600 0 6965200 12986000 10401000 5227600 20469000 16861 5206 15343 141121;141122;141123;141124;141125;141126;141127 112381;112382;112383 112381 2 FPEILQK Unmodified 873.496 0.49600404 1733 P54136 RARS Arginine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 61.245 61.404 2 0.030762 70259 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 74.439 47.642 82386000 0 0 0 5840000 0 8215100 4162900 6925300 4139300 10305000 8580600 7223000 4670300 7024000 15300000 16862 1733 15344 141128;141129;141130;141131;141132;141133;141134;141135;141136;141137;141138 112384 112384 1 FPELNYQLK Unmodified 1150.6023 0.60226003 1419 P40763 STAT3 Signal transducer and activator of transcription 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 76.467 75.176 2 0.0068622 93732 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.85 96.927 393100000 66839000 221200000 28375000 0 0 9659400 4393200 7374500 4167800 10661000 8140700 0 0 9289200 23002000 16863 1419 15345 141139;141140;141141;141142;141143;141144;141145;141146;141147;141148;141149 112385;112386;112387;112388;112389;112390;112391 112387 7 FPERTTVTELPQTSHVSFSEPDIPSSK Unmodified 3015.4825 0.48254541 4747 Q9NYP3 DONSON Protein downstream neighbor of Son yes yes 0 0 1 By MS/MS 2 0 1 1 81.433 73.302 4 1.0639E-05 96041 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.454 30.868 12575000 12575000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16864 4747 15346 141150 112392 112392 1 FPEVIINFPDPAQK Unmodified 1613.8453 0.84534384 2033 Q00341 HDLBP Vigilin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 91.169 90.001 2 1.8567E-14 104643 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 117.25 104.3 197690000 11108000 113600000 2715300 0 2515600 4388100 3035900 3947300 5815800 13219000 7751700 5621000 1854500 5521800 16591000 16865 2033 15347 141151;141152;141153;141154;141155;141156;141157;141158;141159;141160;141161;141162;141163;141164;141165 112393;112394;112395;112396;112397;112398;112399;112400;112401;112402;112403;112404;112405;112406;112407;112408;112409 112394 17 FPEVPEVVVSR Unmodified 1256.6765 0.6764876 4743 Q9NYJ8 TAB2 TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 78.404 78.446 2 0.0086935 89860 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 51.268 34.028 37030000 0 0 0 2194900 2797900 3219500 2458400 2645800 2604200 5211800 4011500 4541800 2732600 4611100 0 16866 4743 15348 141166;141167;141168;141169;141170;141171;141172;141173;141174;141175;141176 112410;112411;112412;112413;112414;112415;112416;112417;112418 112415 9 FPFELVK Unmodified 878.49019 0.49019038 1630 P50570;Q05193 DNM2;DNM1 Dynamin-2;Dynamin-1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.082 80.14 2 0.023406 92611 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 86.866 0 522480000 0 0 0 22084000 21816000 54821000 39530000 32288000 30054000 48981000 36689000 45543000 35211000 46704000 108760000 16867 1630 15349 141177;141178;141179;141180;141181;141182;141183;141184;141185;141186;141187;141188 112419;112420;112421;112422;112423;112424;112425;112426;112427;112428 112423 10 FPFGIQQAK Unmodified 1034.5549 0.5549159 3444 Q8NFD5 ARID1B AT-rich interactive domain-containing protein 1B yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 68.196 68.408 2 0.010149 78502 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 64.757 42.626 12905000 0 0 0 0 0 0 0 0 0 0 7629200 0 5275400 0 0 16868 3444 15350 141189;141190 112429 112429 1 FPFLVTVGK Unmodified 1006.5852 0.5851534 4332 Q9H0K6 PUS7L Pseudouridylate synthase 7 homolog-like protein yes yes 0 0 0 By MS/MS 2 0 1 1 91.608 83.477 2 0.039846 108303 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.91 17.787 2650700 2650700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16869 4332 15351 141191 112430 112430 1 FPFNTPK Unmodified 849.43849 0.43848916 864 P08243 ASNS Asparagine synthetase [glutamine-hydrolyzing] yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 55.511 54.192 2 0.020877 74877 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 111.28 60.312 1203500000 479600000 232990000 158440000 14546000 12007000 38400000 21534000 18805000 15157000 32021000 32564000 31534000 28008000 29334000 58515000 16870 864 15352 141192;141193;141194;141195;141196;141197;141198;141199;141200;141201;141202;141203;141204;141205;141206;141207 112431;112432;112433;112434;112435;112436;112437;112438;112439;112440;112441;112442;112443;112444;112445 112437 14 FPFQDPDLEK Unmodified 1234.587 0.58700389 3471 Q8TAG9 EXOC6 Exocyst complex component 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 73.457 73.295 2 0.010696 84715 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 55.549 35.773 18924000 0 0 0 3853600 5546800 0 3787400 0 0 0 0 0 0 5736600 0 16871 3471 15353 141208;141209;141210;141211;141212;141213;141214 112446;112447;112448;112449;112450;112451 112451 6 FPGEGTAGAALLEEAGGSVK Unmodified 1859.9265 0.92650729 609 O94953 KDM4B Lysine-specific demethylase 4B yes yes 0 0 0 By MS/MS By MS/MS 2.67 0.471 1 2 2 1 85.532 82.573 2;3 3.3892E-05 100278 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 65.092 55.904 9444100 0 7150300 2293800 0 0 0 0 0 0 0 0 0 0 0 0 16872 609 15354 141215;141216;141217 112452;112453;112454;112455 112455 4 FPGQLNADLR Unmodified 1129.588 0.58800695 1963;842;4160;2350;4182;2306;2678;47 P07437;A6NNZ2;P68371;Q13509;Q13885;Q9BVA1;Q3ZCM7;Q9BUF5;CON__ENSEMBL:ENSBTAP00000025008;Q9H4B7 TUBB;TUBB4B;TUBB3;TUBB2A;TUBB2B;TUBB8;TUBB6;TUBB1 Tubulin beta chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-4B chain;Tubulin beta-3 chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-8 chain;Tubulin beta-6 chain;Tubulin beta-1 chain no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.546 62.641 2 8.7253E-12 71305 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 163.32 99.839 + 3151900000 0 0 0 200960000 204720000 227420000 256920000 248000000 124650000 274200000 350970000 314250000 262730000 277410000 409680000 16873 842;1963;2306;2350;4182;2678;4160;47 15355 141218;141219;141220;141221;141222;141223;141224;141225;141226;141227;141228;141229 112456;112457;112458;112459;112460;112461;112462;112463;112464;112465;112466;112467;112468;112469;112470;112471;112472;112473;112474;112475;112476;112477;112478;112479;112480;112481;112482;112483;112484;112485;112486 112462 31 FPGQLNADLRK Unmodified 1257.683 0.68296996 1963;842;4160;2350;4182;2306;2678;47 P07437;A6NNZ2;P68371;Q13509;Q13885;Q9BVA1;Q3ZCM7;Q9BUF5;CON__ENSEMBL:ENSBTAP00000025008;Q9H4B7 TUBB;TUBB4B;TUBB3;TUBB2A;TUBB2B;TUBB8;TUBB6;TUBB1 Tubulin beta chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-4B chain;Tubulin beta-3 chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-8 chain;Tubulin beta-6 chain;Tubulin beta-1 chain no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 50.05 50.205 2;3 6.8736E-06 55971 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 131.52 131.52 + 8446600000 0 0 0 447110000 316550000 580250000 531460000 868970000 339210000 618230000 762900000 927790000 938260000 717980000 1397900000 16874 842;1963;2306;2350;4182;2678;4160;47 15356 141230;141231;141232;141233;141234;141235;141236;141237;141238;141239;141240;141241;141242;141243;141244;141245;141246;141247;141248;141249;141250;141251;141252;141253 112487;112488;112489;112490;112491;112492;112493;112494;112495;112496;112497;112498;112499;112500;112501;112502;112503;112504;112505;112506;112507;112508;112509;112510;112511;112512;112513;112514;112515;112516;112517;112518;112519;112520;112521;112522;112523;112524;112525;112526;112527;112528;112529;112530;112531;112532;112533;112534;112535;112536;112537;112538;112539;112540;112541;112542;112543;112544;112545;112546;112547;112548;112549;112550;112551;112552;112553;112554;112555;112556;112557;112558;112559;112560;112561;112562;112563;112564;112565;112566;112567;112568;112569;112570;112571;112572;112573;112574;112575;112576 112561 86 FPGSAPQQHSILSNQTSK Unmodified 1925.9595 0.95953875 2724 Q5FWF5 ESCO1 N-acetyltransferase ESCO1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 46.233 46.685 3 0.028847 52204 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 31.41 21.489 27670000 0 0 0 0 0 0 0 0 0 6745800 10003000 10921000 0 0 0 16875 2724 15357 141254;141255;141256 112577 112577 0 FPGTSSNTNCQNSSGPDADPSSLLQDCR Unmodified 3011.2621 0.26214065 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 74.05 74.171 3 4.1365E-05 84672 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 31.17 28.521 7761900 0 0 0 0 0 0 0 0 0 0 0 0 5228400 2533500 0 16876 619 15358 141257;141258 112578 112578 1 FPIDYPYSPPAFR Unmodified 1568.7664 0.76636524 1574 P49427 CDC34 Ubiquitin-conjugating enzyme E2 R1 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 85.684 85.79 2 0.011253 99446 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 52.79 29.911 11437000 0 0 0 0 0 2383500 0 0 0 3052500 0 0 0 0 6001500 16877 1574 15359 141259;141260;141261 112579;112580 112579 2 FPIDYPYSPPTFR Unmodified 1598.7769 0.77692993 3028 Q712K3 UBE2R2 Ubiquitin-conjugating enzyme E2 R2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 85.251 85.382 2 1.0256E-06 98660 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.258 71.026 40656000 0 0 0 0 0 4143200 0 3854800 0 6018000 5403200 7765000 3229800 0 10242000 16878 3028 15360 141262;141263;141264;141265;141266;141267;141268;141269 112581;112582;112583;112584;112585;112586;112587;112588 112583 8 FPINGLSDVK Unmodified 1088.5866 0.58660996 3294 Q8IZE3 SCYL3 Protein-associating with the carboxyl-terminal domain of ezrin yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 70.357 69.64 2 0.0081131 79091 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.828 25.473 58725000 0 40551000 2449900 996920 0 0 1083000 1104700 0 1939100 2667300 0 2202300 2549300 3181100 16879 3294 15361 141270;141271;141272;141273;141274;141275;141276;141277;141278;141279 112589;112590;112591;112592;112593;112594 112591 6 FPINGWK Unmodified 860.45447 0.45447358 2326 Q13613 MTMR1 Myotubularin-related protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 73.598 65.402 2 0.034431 86652 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.061 47.108 4931500 4931500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16880 2326 15362 141280 112595 112595 1 FPLDSTGSELK Unmodified 1192.5976 0.59756858 188 O14562 UBFD1 Ubiquitin domain-containing protein UBFD1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 61.377 59.883 2 0.0002407 68399 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 105.94 80.992 794060000 17516000 640610000 10859000 0 8184600 12462000 11305000 6056900 0 16414000 14396000 14146000 7548600 12377000 22186000 16881 188 15363 141281;141282;141283;141284;141285;141286;141287;141288;141289;141290;141291;141292;141293;141294 112596;112597;112598;112599;112600;112601;112602;112603;112604;112605;112606;112607;112608;112609 112603 14 FPLIYGEGK Unmodified 1022.5437 0.54368251 5002 Q9ULR3 PPM1H Protein phosphatase 1H yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 69.547 69.69 2 0.0099839 79734 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 65.156 47.462 82239000 0 0 0 0 6792800 7317300 0 7886400 7619700 0 14372000 11180000 8230000 6169900 12671000 16882 5002 15364 141295;141296;141297;141298;141299;141300;141301;141302;141303;141304 112610;112611;112612;112613;112614;112615;112616;112617;112618 112617 9 FPLTTESAMK Unmodified 1123.5583 0.5583463 1908 P62750 RPL23A 60S ribosomal protein L23a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57.121 56.537 2 0.0006507 64197 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 122.13 100.17 779020000 0 323170000 6957400 31755000 30291000 31753000 29536000 29511000 24715000 41280000 50247000 51653000 32463000 38573000 57115000 16883 1908 15365 141305;141306;141307;141308;141309;141310;141311;141312;141313;141314;141315;141316;141317;141318 112619;112620;112621;112622;112623;112624;112625;112626;112627;112628;112629;112630;112631;112632;112633;112634;112635;112636;112637;112638;112639;112640 112628 21 FPLTTESAMK Oxidation (M) 1139.5533 0.55326092 1908 P62750 RPL23A 60S ribosomal protein L23a yes yes 0 1 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 50.71 42.81 2 0.0090424 53675 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 100.98 52.228 28190000 28190000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16884 1908 15365 141319;141320 112641;112642 112641 3083 1 FPPSTPSEVLSPTEDPR Unmodified 1854.9 0.89995819 1628 P50548 ERF ETS domain-containing transcription factor ERF yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 74.73 74.892 2 0.0098073 86771 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 47.288 31.034 25092000 0 0 0 0 0 0 3483600 2327200 0 3353000 4005200 6092600 2466700 3363400 0 16885 1628 15366 141321;141322;141323;141324;141325;141326;141327 112643;112644 112644 2 FPPYYMR Unmodified 972.45276 0.45275902 1955 P67809 YBX1 Nuclease-sensitive element-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.141 60.247 2 0.024225 69670 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 83.229 50.758 109550000 0 0 0 4669500 6212400 8162000 5009600 8629700 5643100 9955000 11236000 17057000 10612000 9727500 12636000 16886 1955 15367 141328;141329;141330;141331;141332;141333;141334;141335;141336;141337;141338;141339 112645;112646;112647;112648;112649;112650;112651;112652;112653 112645 9 FPQLDSTSFANSR Unmodified 1468.6947 0.69465686 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.248 71.321 2 6.6694E-13 81779 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 162.26 38.54 949050000 0 0 0 36529000 31204000 117750000 45284000 42999000 27214000 93645000 107810000 120170000 54300000 80699000 191450000 16887 1565 15368 141340;141341;141342;141343;141344;141345;141346;141347;141348;141349;141350;141351 112654;112655;112656;112657;112658;112659;112660;112661;112662;112663;112664;112665;112666 112664 13 FPQPIPVSR Unmodified 1039.5815 0.581465 2558 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.904 61.008 2 0.0052927 69490 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 78.113 27.481 92499000 0 0 0 3764700 5465500 6507100 6649900 6102400 5086500 7921900 7836900 9189700 9779500 7899600 16295000 16888 2558 15369 141352;141353;141354;141355;141356;141357;141358;141359;141360;141361;141362;141363 112667;112668;112669;112670;112671;112672;112673;112674;112675 112668 9 FPSINHD Unmodified 828.37662 0.37661719 1061 P17812 CTPS1 CTP synthase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 39.938 38.795 2 0.02222 48834 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.74 102.92 1382200000 499680000 505370000 115240000 12482000 13269000 22089000 13864000 11467000 11637000 19824000 29191000 31529000 23220000 25925000 47423000 16889 1061 15370 141364;141365;141366;141367;141368;141369;141370;141371;141372;141373;141374;141375;141376;141377;141378;141379 112676;112677;112678;112679;112680;112681 112676 6 FPSLLTHNENMVAK Unmodified 1599.8079 0.80791248 1927 P62906 RPL10A 60S ribosomal protein L10a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 70.68 69.775 3 9.4848E-10 92813 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 92.265 79.128 274770000 118910000 32203000 0 0 0 9133600 3554400 7459700 6282000 7947000 10352000 12827000 12583000 18223000 35295000 16890 1927 15371 141380;141381;141382;141383;141384;141385;141386;141387;141388;141389;141390;141391 112682;112683;112684;112685;112686;112687 112684 4 FPSLLTHNENMVAK Oxidation (M) 1615.8028 0.8028271 1927 P62906 RPL10A 60S ribosomal protein L10a yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.47 2 1 14 1 1 1 1 1 2 1 1 2 2 2 60.919 60.511 2;3 0.00098031 85230 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.16 47.217 349460000 74457000 0 0 17796000 16648000 18544000 0 16058000 0 32227000 6433300 37920000 46729000 39726000 42918000 16891 1927 15371 141392;141393;141394;141395;141396;141397;141398;141399;141400;141401;141402;141403;141404;141405;141406 112688;112689;112690;112691;112692 112689 3105 4 FPSNIIVTNGAAREPR Unmodified 1740.9271 0.92711641 3186 Q86WR7 PROSER2 Proline and serine-rich protein 2 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 62.153 62.256 3 0.0043908 70377 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 40.237 29.192 33201000 0 0 0 3009600 0 3426600 0 0 4145300 3662300 3843500 0 0 4305900 10808000 16892 3186 15372 141407;141408;141409;141410;141411;141412;141413;141414 112693;112694;112695;112696;112697 112696 4 FPSSGPVTPQPTALTFAK Unmodified 1844.9672 0.96724989 5268 Q9Y679 AUP1 Ancient ubiquitous protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.396 80.456 2 3.6675E-112 93171 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 225.36 193.03 208820000 0 0 0 10191000 15617000 15820000 16315000 16067000 14710000 22668000 20862000 27923000 11534000 16454000 20659000 16893 5268 15373 141415;141416;141417;141418;141419;141420;141421;141422;141423;141424;141425;141426 112698;112699;112700;112701;112702;112703;112704;112705;112706;112707;112708 112707 11 FPSTETATLAQK Unmodified 1292.6612 0.66123147 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.275 47.44 2 2.0536E-05 54068 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 123.79 74.998 184840000 0 0 0 8835900 8799900 18823000 8576700 8609200 18167000 20978000 18062000 23605000 16430000 14475000 19479000 16894 5216 15374 141427;141428;141429;141430;141431;141432;141433;141434;141435;141436;141437;141438 112709;112710;112711;112712;112713;112714;112715;112716;112717;112718;112719;112720;112721 112721 10 FPSTETATLAQKPSQDTEK Unmodified 2078.0168 0.016778861 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 45.858 46.058 3 2.0339E-05 51297 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 65.924 56.518 258420000 0 0 0 0 25906000 13635000 0 26804000 18466000 34176000 42093000 38198000 34633000 24505000 0 16895 5216 15375 141439;141440;141441;141442;141443;141444;141445;141446;141447 112722;112723 112723 0 FPTLCNQYYK Unmodified 1332.6173 0.61725816 4290 Q9C0E2 XPO4 Exportin-4 yes yes 0 0 0 By MS/MS 2 0 1 1 73.896 65.7 2 0.0048428 86999 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.696 75.928 14226000 14226000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16896 4290 15376 141448 112724 112724 1 FPTLWSGAR Unmodified 1033.5345 0.53451481 2645 Q1KMD3 HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.496 76.554 2 0.0036308 87676 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.12 81.608 338120000 0 0 0 11568000 15213000 25843000 18767000 23564000 19024000 23944000 32104000 52585000 34301000 25388000 55819000 16897 2645 15377 141449;141450;141451;141452;141453;141454;141455;141456;141457;141458;141459;141460 112725;112726;112727;112728;112729;112730;112731;112732;112733;112734 112728 10 FPTQISLAQLR Unmodified 1272.719 0.71902112 261 O15164 TRIM24 Transcription intermediary factor 1-alpha yes yes 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 81.497 81.656 2 0.00099265 94604 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 90.15 71.405 25246000 0 0 0 0 0 0 0 0 0 0 0 7841600 0 4708300 12696000 16898 261 15378 141461;141462;141463 112735 112735 1 FPTQLSR Unmodified 847.4552 0.45520186 2658 Q2TAY7 SMU1 WD40 repeat-containing protein SMU1;WD40 repeat-containing protein SMU1, N-terminally processed yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 39.232 39.381 2 0.034305 42577 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.342 42.77 61697000 0 0 0 0 7031000 0 7039100 0 7411500 0 0 0 0 11743000 28472000 16899 2658 15379 141464;141465;141466;141467;141468 112736 112736 1 FPYPTMSEITVLSAQAK Oxidation (M) 1897.9496 0.94955092 4979 Q9UKY1 ZHX1 Zinc fingers and homeoboxes protein 1 yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 83.228 83.338 2 0.002072 96454 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 44.299 35.111 6098900 0 0 0 0 0 3899200 0 2199700 0 0 0 0 0 0 0 16900 4979 15380 141469;141470 112737 112737 6325 1 FQAEASEK Unmodified 908.42396 0.42396131 5031 Q9UNF1 MAGED2 Melanoma-associated antigen D2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 10.999 11.141 2 0.0051885 9807 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 127.84 110.88 482930000 0 0 0 27176000 23726000 40670000 43801000 31939000 28077000 45051000 38226000 50935000 47844000 36242000 69241000 16901 5031 15381 141471;141472;141473;141474;141475;141476;141477;141478;141479;141480;141481;141482 112738;112739;112740;112741;112742;112743;112744;112745;112746;112747;112748;112749 112748 8 FQAHLTK Unmodified 843.46029 0.46028724 5132 Q9Y312 AAR2 Protein AAR2 homolog yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 23.796 19.824 2 0.044542 28111 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 125.01 92.894 190350000 160620000 0 29723000 0 0 0 0 0 0 0 0 0 0 0 0 16902 5132 15382 141483;141484 112750 112750 0 FQALEPNELDFEVGDK Unmodified 1849.8734 0.87340909 2993 Q6XZF7 DNMBP Dynamin-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 84.324 83.83 2 1.9702E-20 96928 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 111.79 101.31 62283000 0 22059000 0 0 0 3877600 0 0 3521700 7579500 5813500 0 2449000 4396000 12587000 16903 2993 15383 141485;141486;141487;141488;141489;141490;141491;141492;141493 112751;112752;112753;112754;112755;112756;112757;112758 112753 8 FQAMDISLK Unmodified 1051.5372 0.53721693 496 O75419 CDC45 Cell division control protein 45 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 72.754 72.691 2 0.0037823 83449 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 88.948 60.774 34320000 0 0 0 4003200 3629400 0 4034800 6386900 4843600 11422000 0 0 0 0 0 16904 496 15384 141494;141495;141496;141497;141498;141499;141500;141501 112759;112760;112761;112762;112763;112764;112765;112766 112760 8 FQAMDISLK Oxidation (M) 1067.5321 0.53213155 496 O75419 CDC45 Cell division control protein 45 homolog yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 59.263 53.932 2 0.023785 69042 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.846 35.05 20304000 0 20304000 0 0 0 0 0 0 0 0 0 0 0 0 0 16905 496 15384 141502;141503 112767 112767 1 FQAPSPSTLLR Unmodified 1215.6612 0.66117189 2941 Q6P9B9 INTS5 Integrator complex subunit 5 yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.513 76.571 2 0.032637 88576 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 45.161 23.013 69928000 0 0 0 3456500 4005800 5674200 6047900 5154300 4804900 7746700 6277400 8796600 6129000 5636600 6197900 16906 2941 15385 141504;141505;141506;141507;141508;141509;141510;141511;141512;141513;141514;141515 112768 112768 1 FQAPTGEEK Unmodified 1005.4767 0.47672516 3499 Q8TD55 PLEKHO2 Pleckstrin homology domain-containing family O member 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 24.901 24.757 2 0.012004 26555 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 61.962 43.584 107620000 0 13101000 0 9916800 6586300 5632800 6017600 12566000 6050600 5535200 7839700 11090000 7844800 3823700 11618000 16907 3499 15386 141516;141517;141518;141519;141520;141521;141522;141523;141524;141525;141526;141527;141528 112769;112770;112771;112772 112772 4 FQASQGENLEGK Unmodified 1306.6153 0.61534391 3084 Q7Z3K3 POGZ Pogo transposable element with ZNF domain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.637 29.829 2 0.00088849 32207 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 73.067 45.324 94373000 0 0 0 6488100 6848000 5699900 6628700 5482300 5166100 7618900 7552600 9300100 11841000 9159700 12588000 16908 3084 15387 141529;141530;141531;141532;141533;141534;141535;141536;141537;141538;141539;141540 112773;112774;112775;112776;112777;112778;112779;112780;112781 112780 9 FQAVLDELK Unmodified 1061.5757 0.57571092 2547 Q15545 TAF7 Transcription initiation factor TFIID subunit 7 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.166 72.164 2 0.003237 82971 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 90.709 61.791 43317000 0 0 0 5697600 4509900 0 3703200 6519800 4293300 7623400 5912000 0 5058000 0 0 16909 2547 15388 141541;141542;141543;141544;141545;141546;141547;141548;141549;141550;141551;141552 112782;112783;112784;112785;112786;112787;112788;112789;112790;112791;112792 112787 11 FQDELESGK Unmodified 1051.4822 0.48220447 244 O15042 U2SURP U2 snRNP-associated SURP motif-containing protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.53 1.88 1 16 1 1 1 1 1 2 2 1 1 1 1 2 2 30.133 29.979 2 0.0032704 32330 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 90.601 63.471 341350000 4962400 0 0 20666000 15094000 19019000 21411000 28060000 24571000 25408000 30213000 33939000 34569000 38583000 44856000 16910 244 15389 141553;141554;141555;141556;141557;141558;141559;141560;141561;141562;141563;141564;141565;141566;141567;141568;141569 112793;112794;112795;112796;112797;112798;112799;112800;112801;112802;112803;112804;112805;112806;112807 112794 15 FQDLGAAYEVLSDSEK Unmodified 1770.8312 0.83120992 4855 Q9UBS4 DNAJB11 DnaJ homolog subfamily B member 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.06 3.8 5 1 10 2 3 1 1 1 1 1 1 1 1 1 1 1 84.232 82.333 2;3 7.8409E-15 95868 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 129.54 115.38 653550000 27691000 532130000 11394000 0 3459000 4537400 3329900 5447900 3793500 11014000 10520000 11675000 0 8959100 19606000 16911 4855 15390 141570;141571;141572;141573;141574;141575;141576;141577;141578;141579;141580;141581;141582;141583;141584;141585 112808;112809;112810;112811;112812;112813;112814;112815;112816;112817;112818;112819;112820;112821;112822;112823 112812 16 FQDLLSEENESTALPQVLAQPSTSRK Unmodified 2887.4563 0.45633066 715 O96017 CHEK2 Serine/threonine-protein kinase Chk2 yes yes 0 0 1 By MS/MS By MS/MS 6 4 1 1 1 1 85.121 84 3 1.3089E-23 96863 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.837 76.009 13593000 0 0 7127700 0 0 0 0 0 0 0 0 0 0 0 6464900 16912 715 15391 141586;141587 112824;112825 112824 2 FQDTDGK Unmodified 809.35555 0.35554739 1680 P52209 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 6.6212 3.2836 2 0.03062 5407 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.467 51.781 1161300000 47708000 1113600000 0 0 0 0 0 0 0 0 0 0 0 0 0 16913 1680 15392 141588;141589 112826 112826 1 FQDVGPQAPVGSVYQK Unmodified 1718.8628 0.86278482 4940 Q9UJU6 DBNL Drebrin-like protein yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 61.834 61.898 2 7.0301E-07 70141 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.38 92.819 31960000 0 0 0 2089600 1442400 2385800 2555700 2899700 0 0 4885400 7593000 0 0 8108800 16914 4940 15393 141590;141591;141592;141593;141594;141595;141596;141597;141598 112827;112828;112829;112830;112831 112827 5 FQEAVGQAGAISITSK Unmodified 1605.8362 0.83623572 4386 Q9H3S7 PTPN23 Tyrosine-protein phosphatase non-receptor type 23 yes yes 0 0 0 By MS/MS 2 0 1 1 68.323 62.423 2 0.0021901 79787 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.196 40.236 29509000 0 29509000 0 0 0 0 0 0 0 0 0 0 0 0 0 16915 4386 15394 141599 112832;112833 112833 2 FQEDIISIWNK Unmodified 1391.7085 0.70851601 415 O60573 EIF4E2 Eukaryotic translation initiation factor 4E type 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 85.344 85.487 2 0.0020981 98919 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 69.276 54.602 19664000 0 0 0 0 0 0 0 2593200 0 3730400 0 0 0 2583600 10757000 16916 415 15395 141600;141601;141602;141603 112834;112835;112836;112837 112836 4 FQEDQEMAR Unmodified 1152.487 0.48697227 4089 Q9BQ70 TCF25 Transcription factor 25 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 24.668 24.83 2 0.0030483 25840 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 91.318 78.281 63592000 0 0 0 5159800 4468000 5509600 5884200 5428800 0 8603500 7103900 8442300 6982200 6009300 0 16917 4089 15396 141604;141605;141606;141607;141608;141609;141610;141611;141612;141613 112838;112839;112840;112841;112842;112843;112844;112845;112846 112841 9 FQEDQEMARDLVER Unmodified 1764.8101 0.81009732 4089 Q9BQ70 TCF25 Transcription factor 25 yes yes 0 0 1 By matching By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 60.358 60.724 3 0.00037288 68655 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.147 28.812 21828000 0 0 0 0 0 0 0 3139600 0 0 5378400 2660900 0 4021800 6627400 16918 4089 15397 141614;141615;141616;141617;141618 112847 112847 1 FQEEANLYAAK Unmodified 1282.6194 0.61936665 1414 P40426 PBX3 Pre-B-cell leukemia transcription factor 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 46.067 45.769 2 0.00020717 57630 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.88 0 186250000 0 75739000 0 0 4629400 10429000 7874100 0 5746800 10747000 13846000 13832000 8431100 16278000 18695000 16919 1414 15398 141619;141620;141621;141622;141623;141624;141625;141626;141627;141628;141629;141630 112848;112849;112850;112851;112852;112853;112854;112855;112856;112857;112858;112859;112860;112861 112852 13 FQEEEFQNDIEK Unmodified 1554.6838 0.6838174 4146 Q9BTF0 THUMPD2 THUMP domain-containing protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 62.122 56.247 2 3.0661E-05 72146 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.51 108.2 16419000 0 16419000 0 0 0 0 0 0 0 0 0 0 0 0 0 16920 4146 15399 141631 112862 112862 1 FQEHIIQAPK Unmodified 1209.6506 0.6506072 4896 Q9UHD1 CHORDC1 Cysteine and histidine-rich domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.58 3.64 7 1 18 3 3 2 1 2 2 1 1 2 2 1 1 2 1 2 46.277 44.598 2;3 0.0012559 63139 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 128.27 107.57 3189700000 1701000000 322240000 649730000 16930000 11272000 104470000 19369000 13431000 41283000 56409000 36936000 39253000 39497000 33502000 104400000 16921 4896 15400 141632;141633;141634;141635;141636;141637;141638;141639;141640;141641;141642;141643;141644;141645;141646;141647;141648;141649;141650;141651;141652;141653;141654;141655;141656;141657 112863;112864;112865;112866;112867;112868;112869;112870;112871;112872;112873;112874;112875;112876;112877;112878;112879 112871 12 FQEHIIQAPKPVEAIK Unmodified 1847.0305 0.030518853 4896 Q9UHD1 CHORDC1 Cysteine and histidine-rich domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.44 3.14 1 2 2 20 3 1 1 1 2 2 2 1 2 2 2 2 2 2 63.713 62.986 3;4 4.107E-05 71408 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 89.311 78.212 1573300000 829160000 6583000 13479000 0 2147500 63001000 34817000 40490000 7510600 63818000 62117000 98720000 68515000 64565000 218410000 16922 4896 15401 141658;141659;141660;141661;141662;141663;141664;141665;141666;141667;141668;141669;141670;141671;141672;141673;141674;141675;141676;141677;141678;141679;141680;141681;141682 112880;112881;112882;112883;112884;112885;112886;112887;112888;112889;112890;112891;112892;112893;112894 112882 10 FQELIFEDFAR Unmodified 1413.6929 0.69286595 4003 Q96TA1 FAM129B Niban-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 89.401 89.546 2 5.6861E-05 103855 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 114.5 91.756 22603000 0 0 0 0 0 3827800 1009500 1390100 1009800 3575900 2193100 1620600 0 1400500 6575300 16923 4003 15402 141683;141684;141685;141686;141687;141688;141689;141690;141691 112895;112896;112897;112898;112899;112900;112901;112902;112903 112895 9 FQELLASPAYR Unmodified 1293.6717 0.67173657 4628 Q9NSI2 FAM207A Protein FAM207A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.96 69.039 2 0.0020604 78971 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 81.338 51.083 153880000 0 0 0 9819600 5800300 13093000 10552000 10480000 8477000 15170000 16141000 15549000 13003000 12352000 23440000 16924 4628 15403 141692;141693;141694;141695;141696;141697;141698;141699;141700;141701;141702;141703 112904;112905;112906;112907;112908;112909;112910;112911;112912;112913;112914 112908 9 FQELQLAAGR Unmodified 1131.6037 0.60365701 109;91 CON__Q9R0H5;CON__Q3SY84;Q3SY84 KRT71 Keratin, type II cytoskeletal 71 no no 0 0 0 By MS/MS 10 0 1 1 59.529 59.731 2 0.01068 68347 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 82.426 14.445 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16925 109;91 15404 141704 112915 112915 1 FQEMIETTLDMDQVENHEFLVK Oxidation (M) 2711.2459 0.24586887 1474 P43246 MSH2 DNA mismatch repair protein Msh2 yes yes 0 1 0 By MS/MS 2 0 1 1 89.691 81.561 3 3.5673E-11 105983 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.574 78.641 10022000 10022000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16926 1474 15405 141705 112916 112916 2319 1 FQEMIETTLDMDQVENHEFLVK Unmodified 2695.251 0.25095425 1474 P43246 MSH2 DNA mismatch repair protein Msh2 yes yes 0 0 0 By MS/MS 2 0 1 1 93.62 85.489 3 6.3146E-16 110724 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.703 94.031 25961000 25961000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16927 1474 15405 141706 112917 112917 1 FQEQNETFQANR Unmodified 1510.6801 0.68006943 3665 Q92805 GOLGA1 Golgin subfamily A member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 35.043 35.237 2 7.9716E-11 38369 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 147.95 117.69 64311000 0 0 0 7701700 4300300 0 4933000 5961200 0 4235300 8683200 9259700 7384800 0 11852000 16928 3665 15406 141707;141708;141709;141710;141711;141712;141713;141714;141715;141716;141717 112918;112919;112920;112921;112922;112923;112924;112925;112926;112927;112928;112929 112927 12 FQESEERPK Unmodified 1148.5462 0.54620171 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.256 11.371 3 0.014471 9550 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.149 67.539 85621000 0 0 0 3755800 1382500 2891100 2208900 1898600 2158200 3492000 0 13882000 4410400 11785000 37756000 16929 1337 15407 141718;141719;141720;141721;141722;141723;141724;141725;141726;141727;141728 112930 112930 0 FQESNDK Unmodified 866.37701 0.37701112 4345 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 yes yes 0 0 0 By matching By MS/MS 2.5 0.5 1 1 1 1 5.9195 2.4868 2 0.012413 4242 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.37 97.681 80109000 141030 79968000 0 0 0 0 0 0 0 0 0 0 0 0 0 16930 4345 15408 141729;141730 112931 112931 1 FQETEFLSPPR Unmodified 1349.6616 0.66156582 1446 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 72.194 72.339 2 0.0005906 83044 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 96.143 76.002 166000000 0 0 0 0 12966000 0 14270000 21921000 7552300 14498000 17453000 24702000 20379000 13266000 18995000 16931 1446 15409 141731;141732;141733;141734;141735;141736;141737;141738;141739;141740 112932;112933;112934;112935;112936;112937;112938;112939 112934 6 FQETEFLSPPRK Unmodified 1477.7565 0.75652884 1446 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.96 2.69 3 20 1 1 1 2 2 2 2 2 2 1 1 2 1 1 2 61.299 60.589 2;3 3.0612E-06 68841 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 91.245 86.068 2027900000 282880000 28054000 51928000 86230000 92657000 142950000 126870000 145100000 128280000 123040000 139550000 193630000 119200000 121910000 245640000 16932 1446 15410 141741;141742;141743;141744;141745;141746;141747;141748;141749;141750;141751;141752;141753;141754;141755;141756;141757;141758;141759;141760;141761;141762;141763 112940;112941;112942;112943;112944;112945;112946;112947;112948;112949;112950;112951;112952;112953;112954;112955;112956;112957;112958;112959;112960;112961;112962;112963;112964;112965;112966;112967 112961 24 FQETGFFK Unmodified 1002.4811 0.48108226 676 O95630 STAMBP STAM-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 6 4 3 3 1 1 1 1 1 1 64.76 61.866 2 0.010563 83151 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 112.17 91.889 92331000 33906000 18776000 24926000 0 0 3589700 0 0 0 0 6310900 0 0 4822800 0 16933 676 15411 141764;141765;141766;141767;141768;141769 112968;112969;112970;112971;112972;112973 112970 6 FQETSDEFEAARK Unmodified 1556.7107 0.71070086 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.39 3.7 5 1 12 1 3 2 1 1 1 1 1 1 1 1 1 1 1 1 38.077 36.601 2;3 1.9086E-21 47799 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 111.79 108.32 686090000 30023000 130640000 49275000 22197000 19068000 48253000 27225000 29820000 24598000 44191000 40483000 57469000 41104000 48919000 72826000 16934 2431 15412 141770;141771;141772;141773;141774;141775;141776;141777;141778;141779;141780;141781;141782;141783;141784;141785;141786;141787 112974;112975;112976;112977;112978;112979;112980;112981;112982;112983;112984;112985;112986;112987;112988;112989;112990;112991;112992 112979 15 FQFDGDK Unmodified 855.37628 0.37628284 1680 P52209 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 34.67 34.874 2 0.050373 37121 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.659 53.188 87007000 0 0 0 2229300 1295500 0 2490100 2096200 3299900 0 12202000 8433500 2540700 8421100 43998000 16935 1680 15413 141788;141789;141790;141791;141792;141793;141794;141795;141796;141797 112993 112993 1 FQFDGDKK Unmodified 983.47125 0.47124585 1680 P52209 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 29.293 24.902 2 0.029287 31525 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 104.45 75.935 200320000 44379000 55888000 100050000 0 0 0 0 0 0 0 0 0 0 0 0 16936 1680 15414 141798;141799;141800 112994 112994 0 FQFETEVPDAYNMVPPK Unmodified 2010.9397 0.93971451 3721 Q969M7 UBE2F NEDD8-conjugating enzyme UBE2F yes yes 0 0 0 By MS/MS 2 0 1 1 89.447 84.574 2 0.0010399 105010 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.522 80.019 23686000 0 23686000 0 0 0 0 0 0 0 0 0 0 0 0 0 16937 3721 15415 141801 112995;112996 112995 2 FQFNLQDFR Unmodified 1213.588 0.58800695 2604 Q16513 PKN2 Serine/threonine-protein kinase N2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 84.891 85.049 2 0.010476 98238 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.265 55.05 12043000 0 0 0 0 0 0 0 0 3523600 0 0 0 0 1750300 6769400 16938 2604 15416 141802;141803;141804 112997 112997 1 FQFPSHVTDVSEEAK Unmodified 1719.8104 0.8104149 5247 Q9Y5S2 CDC42BPB Serine/threonine-protein kinase MRCK beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.836 66.919 3 0.00050009 76824 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 61.732 54.323 71725000 0 0 0 2859200 3196900 8503800 4262600 5034100 4394400 6654300 6169700 7103900 6033100 5071000 12442000 16939 5247 15417 141805;141806;141807;141808;141809;141810;141811;141812;141813;141814;141815;141816 112998;112999;113000;113001;113002;113003;113004;113005;113006;113007;113008 113004 11 FQFVSGADEK Unmodified 1126.5295 0.52948901 2882 Q6IA86 ELP2 Elongator complex protein 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 49.878 50.033 2 0.0018117 55348 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 101.46 85.257 43706000 0 0 0 3408300 0 0 0 0 0 6314000 0 0 6012300 10754000 17218000 16940 2882 15418 141817;141818;141819;141820;141821;141822;141823 113009;113010;113011;113012;113013;113014 113012 6 FQGAGSNK Unmodified 807.38752 0.38751622 2207 Q12906 ILF3 Interleukin enhancer-binding factor 3 yes yes 0 0 0 By MS/MS 2 0 1 1 5.5439 2.3035 2 0.0060513 4237 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.68 129.68 1254200000 0 1254200000 0 0 0 0 0 0 0 0 0 0 0 0 0 16941 2207 15419 141824 113015 113015 1 FQGEDTVVIASK Unmodified 1292.6612 0.66123147 1328 P33176 KIF5B Kinesin-1 heavy chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 50.924 50.69 2 0.00091386 57350 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 89.171 51.444 613380000 0 19987000 0 28440000 29534000 52008000 34471000 33011000 50783000 45902000 59436000 61951000 64055000 38568000 95236000 16942 1328 15420 141825;141826;141827;141828;141829;141830;141831;141832;141833;141834;141835;141836;141837 113016;113017;113018;113019;113020;113021;113022;113023;113024;113025;113026;113027 113016 12 FQGENTK Unmodified 822.38718 0.38718187 3784 Q96CT7 CCDC124 Coiled-coil domain-containing protein 124 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 6.8571 3.5194 2 0.016748 5512 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.62 99.854 134970000 6109200 128860000 0 0 0 0 0 0 0 0 0 0 0 0 0 16943 3784 15421 141838;141839 113028 113028 1 FQGMNQEQAMAK Oxidation (M) 1397.6068 0.60676983 4530 Q9HD67 MYO10 Unconventional myosin-X yes yes 0 1 0 By MS/MS 2 0 1 1 28.789 24.441 2 0.004062 32132 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.282 59.949 10821000 0 10821000 0 0 0 0 0 0 0 0 0 0 0 0 0 16944 4530 15422 141840 113029 113029 5950 1 FQGMNQEQAMAK Unmodified 1381.6119 0.61185521 4530 Q9HD67 MYO10 Unconventional myosin-X yes yes 0 0 0 By MS/MS 2 0 1 1 41.427 36.331 2 2.799E-05 47454 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.2 87.105 13151000 0 13151000 0 0 0 0 0 0 0 0 0 0 0 0 0 16945 4530 15422 141841 113030 113030 1 FQGPDNGQGPK Unmodified 1143.5309 0.530886 324 O43396 TXNL1 Thioredoxin-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 19.309 18.551 2 0.0037222 18990 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 63.216 57.113 760280000 13146000 688490000 0 0 0 0 0 0 0 5525300 9244300 9633400 2833500 6772600 24629000 16946 324 15423 141842;141843;141844;141845;141846;141847;141848;141849;141850;141851 113031;113032;113033;113034;113035;113036;113037;113038;113039;113040 113040 10 FQGQDTILDYTLREVDTV Unmodified 2112.0375 0.037514303 1378 P36639 NUDT1 7,8-dihydro-8-oxoguanine triphosphatase yes yes 0 0 1 By MS/MS 3 0 1 1 96.968 93.691 2 0.00095211 112299 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 89.013 76.032 2912100 0 2912100 0 0 0 0 0 0 0 0 0 0 0 0 0 16947 1378 15424 141852 113041 113041 1 FQGQPDIYK Unmodified 1094.5397 0.53965977 3994 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.24 42.417 2 0.0095337 47060 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 66.457 37.962 169320000 0 0 0 7300800 10105000 14534000 9934500 12095000 8614700 13259000 16224000 18053000 18138000 11856000 29204000 16948 3994 15425 141853;141854;141855;141856;141857;141858;141859;141860;141861;141862;141863;141864 113042;113043;113044;113045 113044 4 FQGSGAATETAESR Unmodified 1410.6375 0.63753591 245 O15047 SETD1A Histone-lysine N-methyltransferase SETD1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.434 21.638 2 0.00038849 21419 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.614 82.968 186150000 0 0 0 9086800 8153100 16659000 14582000 13061000 10321000 13144000 16624000 19311000 18872000 24392000 21948000 16949 245 15426 141865;141866;141867;141868;141869;141870;141871;141872;141873;141874;141875;141876 113046;113047;113048;113049;113050;113051;113052;113053;113054;113055;113056 113049 11 FQHPSHELLK Unmodified 1234.6459 0.64585618 2961 Q6PKG0;Q659C4 LARP1;LARP1B La-related protein 1;La-related protein 1B yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 2 1 1 1 1 1 2 2 2 29.678 29.874 2;3 0.012975 30603 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.528 36.267 216210000 0 0 0 8585400 6056400 15996000 12778000 14361000 15287000 8933200 11190000 0 30729000 22304000 69989000 16950 2961 15427 141877;141878;141879;141880;141881;141882;141883;141884;141885;141886;141887;141888;141889;141890;141891 113057;113058;113059 113059 3 FQIATVTEK Unmodified 1035.5601 0.56006086 1229 P28070 PSMB4 Proteasome subunit beta type-4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.836 52.979 2 0.0034521 59928 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 106.38 85.827 1008200000 0 0 0 25747000 8459200 34862000 13407000 10790000 16674000 35558000 238590000 161810000 44003000 49523000 368740000 16951 1229 15428 141892;141893;141894;141895;141896;141897;141898;141899;141900;141901;141902;141903 113060;113061;113062;113063;113064;113065;113066;113067;113068 113060 9 FQIEANFPR Unmodified 1120.5665 0.56654322 3783 Q96CS3 FAF2 FAS-associated factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 73.993 73.812 2 0.010514 85130 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 64.207 26.649 25086000 0 0 0 2815000 4170300 0 0 0 0 1521400 0 0 16580000 0 0 16952 3783 15429 141904;141905;141906;141907;141908 113069;113070 113070 2 FQIGELANTLTSK Unmodified 1420.7562 0.75619449 3327 Q8N3X1 FNBP4 Formin-binding protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 84.576 83.331 2 0.0047477 96165 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 66.663 31.218 32182000 7815700 0 0 0 0 0 0 0 3949800 4518100 0 0 2598800 4756200 8543400 16953 3327 15430 141909;141910;141911;141912;141913;141914 113071;113072;113073;113074 113074 4 FQILNDEIITILDK Unmodified 1673.924 0.9239881 3050 Q7L576 CYFIP1 Cytoplasmic FMR1-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0.632 1 3 1 2 3 96.972 93.844 2 8.154E-06 118070 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 119.76 109.18 32990000 11686000 21305000 0 0 0 0 0 0 0 0 0 0 0 0 0 16954 3050 15431 141915;141916;141917;141918;141919 113075;113076;113077 113077 2 FQIPPNAELK Unmodified 1155.6288 0.62880913 2080 Q02790 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.24 2 1 10 1 1 1 1 1 1 1 2 1 1 1 1 70.257 68.654 2 0.0035551 78957 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.064 66.035 233190000 15279000 42141000 38739000 10057000 0 0 0 8213600 0 0 0 24245000 12110000 33878000 48525000 16955 2080 15432 141920;141921;141922;141923;141924;141925;141926;141927;141928;141929;141930;141931;141932 113078;113079;113080;113081;113082;113083;113084;113085;113086;113087;113088;113089;113090;113091;113092;113093;113094;113095;113096;113097;113098;113099;113100;113101 113081 24 FQIQPLPQSENK Unmodified 1427.7409 0.74087877 3755 Q96BD5 PHF21A PHD finger protein 21A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 63.225 62.549 2 3.9388E-08 71568 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 140.83 122.93 317950000 0 78649000 0 13612000 16363000 19038000 18974000 25460000 13340000 19048000 19764000 24779000 23530000 22556000 22841000 16956 3755 15433 141933;141934;141935;141936;141937;141938;141939;141940;141941;141942;141943;141944;141945;141946 113102;113103;113104;113105;113106;113107;113108;113109;113110;113111;113112;113113;113114;113115;113116 113108 12 FQLFGSPSGQK Unmodified 1194.6033 0.60332266 764 P02788 LTF Lactotransferrin;Lactoferricin-H;Kaliocin-1;Lactoferroxin-A;Lactoferroxin-B;Lactoferroxin-C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 68 68.05 2 0.012021 78304 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 47.96 27.334 55059000 0 0 0 0 2575900 0 0 4574400 0 28357000 6184200 0 13368000 0 0 16957 764 15434 141947;141948;141949;141950;141951 113117;113118 113118 2 FQLSNSGPNSTIK Unmodified 1391.7045 0.70449327 4 A0FGR8 ESYT2 Extended synaptotagmin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 11 2 2 1 1 2 1 1 1 55.53 55.432 2 0.00013748 57341 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 104.22 65.259 68044000 0 0 0 13612000 9605600 4389300 5976000 15207000 0 0 2587700 0 8384100 8283200 0 16958 4 15435 141952;141953;141954;141955;141956;141957;141958;141959;141960;141961;141962 113119;113120;113121;113122;113123 113123 5 FQMAYSNLLR Oxidation (M) 1257.6176 0.61759251 1386 P37108 SRP14 Signal recognition particle 14 kDa protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 2 2 1 1 2 2 2 1 1 65.858 65.88 2 0.0022043 75370 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 76.827 52.672 132240000 0 0 0 10223000 11349000 0 16853000 12377000 11733000 18087000 21274000 30341000 0 0 0 16959 1386 15436 141963;141964;141965;141966;141967;141968;141969;141970;141971;141972;141973;141974;141975;141976;141977 113124;113125;113126;113127;113128;113129;113130;113131;113132;113133;113134;113135;113136;113137;113138;113139 113131 2151 16 FQMEDLVYNPEQVPR Oxidation (M) 1879.8774 0.87744861 36 A8K2U0 A2ML1 Alpha-2-macroglobulin-like protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 73.729 73.811 2 0.000776 85114 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 58.676 44.419 78507000 0 0 0 9139700 0 19255000 4352600 0 4051500 5271500 0 6592600 0 9464300 20379000 16960 36 15437 141978;141979;141980;141981;141982;141983;141984;141985 113140;113141 113140 33 1 FQMPDQGMTSADDFFQGTK 2 Oxidation (M) 2181.8983 0.89831998 2613 Q16555 DPYSL2 Dihydropyrimidinase-related protein 2 yes yes 0 2 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 70.271 70.564 2 9.3742E-18 80569 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.631 93.652 13988000 0 0 0 0 0 0 0 0 0 0 4865700 0 0 2361200 6761400 16961 2613 15438 141986;141987;141988 113142;113143 113142 4263;4264 2 FQMPDQGMTSADDFFQGTK Unmodified 2149.9085 0.90849074 2613 Q16555 DPYSL2 Dihydropyrimidinase-related protein 2 yes yes 0 0 0 By MS/MS 10 0 1 1 84.817 84.996 2 0.014989 98229 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 29.912 26.962 3336000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3336000 16962 2613 15438 141989 113144 113144 1 FQMQVLPQCGHAVHEDAPDK Unmodified 2306.0572 0.057220663 5221 Q9Y570 PPME1 Protein phosphatase methylesterase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 67.25 61.266 4 0.00024475 81719 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.526 49.064 157350000 115920000 36845000 4583000 0 0 0 0 0 0 0 0 0 0 0 0 16963 5221 15439 141990;141991;141992 113145;113146;113147;113148;113149 113148 5 FQNALLVR Unmodified 959.55525 0.55525025 64 CON__P02768-1;P02768 ALB Serum albumin yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 2 1 1 1 1 1 1 1 1 1 1 57.397 57.452 2 0.0042815 65263 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 144.9 75.667 + 2112200000 0 0 0 700070000 41347000 33272000 0 1047700000 23056000 41793000 59430000 57898000 54348000 16404000 36838000 16964 64 15440 141993;141994;141995;141996;141997;141998;141999;142000;142001;142002;142003;142004 113150;113151;113152;113153;113154;113155;113156;113157;113158;113159;113160;113161;113162;113163;113164;113165;113166;113167;113168 113156 18 FQNDRTEDEQFNDEK Unmodified 1913.8028 0.80276334 5140 Q9Y376 CAB39 Calcium-binding protein 39 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 28.132 26.952 3 0.00037729 35908 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.966 72.198 64743000 15679000 20584000 0 0 0 0 0 0 0 3565200 6842900 0 3380400 3244800 11446000 16965 5140 15441 142005;142006;142007;142008;142009;142010;142011 113169;113170 113170 2 FQNNSEDNVK Unmodified 1193.5313 0.53127993 3242 Q8IWJ2 GCC2 GRIP and coiled-coil domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 11.722 11.307 2 0.0022879 13174 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.6 86.813 44420000 0 24499000 0 1008200 1260400 1640800 1276400 1150400 1477000 1986800 0 1801200 3262100 2155800 2902100 16966 3242 15442 142012;142013;142014;142015;142016;142017;142018;142019;142020;142021;142022;142023;142024 113171;113172;113173;113174;113175;113176 113171 6 FQNPQTEGVNAVEDEIK Unmodified 1916.9116 0.91158551 2651 Q2M2I8 AAK1 AP2-associated protein kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 72.663 72.839 2 1.0112E-24 83392 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 105 85.545 58156000 0 0 0 0 0 5922900 3881900 5173400 4266700 7140600 7463200 7061300 4302600 0 12944000 16967 2651 15443 142025;142026;142027;142028;142029;142030;142031;142032;142033;142034 113177;113178;113179;113180;113181;113182;113183;113184;113185;113186;113187;113188 113180 12 FQNPQTEGVNAVEDEIKK Unmodified 2045.0065 0.006548526 2651 Q2M2I8 AAK1 AP2-associated protein kinase 1 yes yes 0 0 1 By matching By MS/MS 2 0 2 1 1 75.951 69.308 3 0.00077878 86762 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 39.923 29.438 20798000 5396600 15402000 0 0 0 0 0 0 0 0 0 0 0 0 0 16968 2651 15444 142035;142036 113189 113189 1 FQPASAPAEDCISSSTEPKPDPK Unmodified 2458.1322 0.13221932 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 52.188 51.551 3 1.7542E-10 58114 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 68.88 65.915 281880000 0 32319000 0 11443000 10868000 25263000 14939000 18110000 16338000 23959000 27312000 26485000 16241000 22046000 36561000 16969 2361 15445 142037;142038;142039;142040;142041;142042;142043;142044;142045;142046;142047;142048;142049;142050 113190;113191;113192;113193;113194;113195;113196;113197;113198;113199;113200;113201;113202;113203;113204 113194 15 FQPASAPAEDCISSSTEPKPDPKK Unmodified 2586.2272 0.22718234 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 1 1 2 2 1 1 2 2 1 1 1 45.817 46.032 3;4 2.2237E-06 51549 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 48.489 41.691 242490000 0 0 0 11630000 15988000 16106000 21362000 23346000 9778400 19338000 28995000 36007000 21037000 17226000 21679000 16970 2361 15446 142051;142052;142053;142054;142055;142056;142057;142058;142059;142060;142061;142062;142063;142064;142065;142066 113205;113206;113207;113208;113209;113210;113211;113212;113213;113214;113215;113216 113211 12 FQPFQDGSSGQR Unmodified 1352.6109 0.61092723 4001 Q96T76 MMS19 MMS19 nucleotide excision repair protein homolog yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 41.873 42.051 2 0.00065018 47168 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 76.465 67.251 32647000 0 0 0 0 3813200 4109000 0 0 0 4848100 0 0 4396400 5866800 9613400 16971 4001 15447 142067;142068;142069;142070;142071;142072;142073 113217;113218;113219;113220;113221;113222;113223;113224 113217 8 FQPGETLTEILETPATSEQEAEHQR Unmodified 2840.3464 0.34644586 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 87.406 87.539 3 1.0971E-05 101494 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 39.506 32.394 14830000 0 0 0 0 0 0 0 0 0 2924900 0 0 0 0 11905000 16972 1518 15448 142074;142075 113225;113226;113227 113225 3 FQPLLDGLK Unmodified 1029.5859 0.58588168 417 O60610 DIAPH1 Protein diaphanous homolog 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 77.516 77.607 2 0.0074164 90140 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 72.485 36.605 489630000 0 0 0 30457000 0 61087000 35881000 35144000 28266000 50891000 50621000 45400000 45275000 42458000 64147000 16973 417 15449 142076;142077;142078;142079;142080;142081;142082;142083;142084;142085;142086 113228;113229;113230;113231 113231 4 FQPPPEYQLTAAELK Unmodified 1730.8879 0.88793694 2777 Q5T5X7 BEND3 BEN domain-containing protein 3 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 80.062 79.731 2 0.0002503 98620 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.88 74.137 123450000 0 75470000 0 0 2765900 3201000 3040200 3040500 2938400 4773800 4274000 7289300 0 4247900 12405000 16974 2777 15450 142087;142088;142089;142090;142091;142092;142093;142094;142095;142096;142097 113232;113233;113234;113235;113236;113237;113238;113239 113233 8 FQPQSPDFLDITNPK Unmodified 1745.8625 0.86245047 3681 Q92890 UFD1L Ubiquitin fusion degradation protein 1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 83.993 82.698 2 2.357E-23 102680 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.97 110.01 824950000 10897000 675680000 10875000 5625000 8302000 13449000 8394400 0 7958600 0 12867000 17320000 10325000 12028000 31234000 16975 3681 15451 142098;142099;142100;142101;142102;142103;142104;142105;142106;142107;142108;142109;142110;142111 113240;113241;113242;113243;113244;113245;113246;113247;113248;113249;113250 113242 11 FQQAADLIDAEQR Unmodified 1503.7318 0.73177065 17 A3KN83 SBNO1 Protein strawberry notch homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.953 62.008 2 2.3669E-09 70762 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 137.89 89.612 61638000 0 0 0 3956000 4125700 6899800 6390700 6284200 0 7322900 5869000 0 6508300 4300800 9980500 16976 17 15452 142112;142113;142114;142115;142116;142117;142118;142119;142120;142121;142122;142123 113251;113252;113253;113254;113255;113256;113257;113258;113259;113260;113261;113262;113263;113264;113265;113266 113258 16 FQQAIDSR Unmodified 963.47739 0.47739386 1310 P31944 CASP14 Caspase-14;Caspase-14 subunit p17, mature form;Caspase-14 subunit p10, mature form;Caspase-14 subunit p20, intermediate form;Caspase-14 subunit p8, intermediate form yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 21.795 21.961 2 0.0047298 22948 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 113.5 40.886 465250000 0 0 0 154480000 21663000 35164000 34931000 27642000 18474000 31635000 49493000 50378000 18930000 22454000 0 16977 1310 15453 142124;142125;142126;142127;142128;142129;142130;142131;142132;142133;142134 113267;113268;113269;113270;113271;113272;113273;113274;113275;113276 113275 10 FQQAQEELAEMK Unmodified 1450.6762 0.67622961 4792 Q9P0K7 RAI14 Ankycorbin yes yes 0 0 0 By MS/MS 2 0 1 1 59.4 53.557 2 0.00026078 68974 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.483 64.796 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16978 4792 15454 142135 113277 113277 1 FQQENEELK Unmodified 1163.5459 0.54586736 4992 Q9ULD2 MTUS1 Microtubule-associated tumor suppressor 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 69.301 64.036 2 0.045638 81398 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.981 20.019 40757000 0 40757000 0 0 0 0 0 0 0 0 0 0 0 0 0 16979 4992 15455 142136;142137 113278;113279 113278 2 FQQLVHQMTELCWEKCMDK Unmodified 2510.1215 0.12147718 383 O60220 TIMM8A Mitochondrial import inner membrane translocase subunit Tim8 A yes yes 0 0 1 By MS/MS By MS/MS By matching 10 0 3 1 1 1 76.223 76.183 3 0.012365 87925 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 16.312 8.1242 69691000 0 0 0 5743800 0 0 0 0 39066000 0 0 24882000 0 0 0 16980 383 15456 142138;142139;142140 113280 113280 1 FQQQLEQLNSMGFINR Oxidation (M) 1967.9523 0.95234489 4609 Q9NRR5 UBQLN4 Ubiquilin-4 yes yes 0 1 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 75.521 75.544 2 7.9948E-11 87232 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 96.103 81.541 38975000 0 0 0 1500500 1398800 2188900 2812300 3174800 0 4268900 3449900 11337000 4171200 4672800 0 16981 4609 15457 142141;142142;142143;142144;142145;142146;142147;142148;142149;142150 113281 113281 6006 1 FQQQLEQLNSMGFINR Unmodified 1951.9574 0.95743026 4609 Q9NRR5 UBQLN4 Ubiquilin-4 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 80.775 80.977 3 0.00073253 93352 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.775 0 15001000 0 0 0 0 0 0 0 2643000 0 0 0 0 0 0 12358000 16982 4609 15457 142151;142152 113282;113283 113282 2 FQQQQGLR Unmodified 1003.5199 0.51992738 248 O15067 PFAS Phosphoribosylformylglycinamidine synthase yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 18.897 19.113 2 0.0069548 18322 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 122.79 94.278 133810000 0 0 0 3309700 4001900 4520800 0 4841000 3656100 7680900 16672000 17891000 8360500 13112000 49762000 16983 248 15458 142153;142154;142155;142156;142157;142158;142159;142160;142161;142162;142163 113284;113285;113286;113287;113288 113284 4 FQQQSNPPSR Unmodified 1187.5683 0.56833414 4288 Q9C0D5 TANC1 Protein TANC1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 13.054 13.349 2 0.0009285 12751 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 112.84 76.962 46491000 0 0 0 0 0 0 0 4570500 0 8198200 6711500 7364100 5836800 5746000 8063600 16984 4288 15459 142164;142165;142166;142167;142168;142169;142170 113289;113290;113291;113292;113293;113294 113293 6 FQQSDDLK Unmodified 979.46108 0.4610751 3337 Q8N543 OGFOD1 Prolyl 3-hydroxylase OGFOD1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 2 1 1 1 1 1 1 1 1 1 1 19.719 19.846 2 0.0048222 19582 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 113.89 49.132 364900000 0 0 0 28962000 28201000 34513000 31507000 26312000 28750000 40470000 0 0 38891000 41926000 65369000 16985 3337 15460 142171;142172;142173;142174;142175;142176;142177;142178;142179;142180;142181;142182 113295;113296;113297;113298;113299;113300;113301;113302;113303;113304 113300 10 FQQVPTDALANK Unmodified 1330.6881 0.68811492 2961 Q6PKG0 LARP1 La-related protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 52.689 52.751 2 0.00056536 59309 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 89.886 72.646 432410000 0 0 0 24734000 23621000 42362000 30069000 27287000 30782000 64376000 0 66966000 65895000 56321000 0 16986 2961 15461 142183;142184;142185;142186;142187;142188;142189;142190;142191;142192 113305;113306;113307;113308;113309;113310;113311;113312;113313;113314 113308 9 FQRPGDPQSAQDK Unmodified 1472.7008 0.70080487 2554 Q15637 SF1 Splicing factor 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20.351 19.72 3 7.5801E-05 20188 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 84.734 72.103 599650000 140680000 22021000 37814000 22628000 22066000 25709000 28181000 22013000 22879000 34703000 33154000 43994000 28240000 36256000 79306000 16987 2554 15462 142193;142194;142195;142196;142197;142198;142199;142200;142201;142202;142203;142204;142205;142206;142207 113315;113316;113317;113318;113319;113320;113321;113322;113323;113324;113325;113326 113325 9 FQSDSSSYPTVDSNSLLGQSR Unmodified 2274.04 0.040033499 5066 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 13 1 1 2 2 1 1 1 2 1 1 72.326 72.454 2;3 1.1622E-37 83536 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 139.6 124.57 144500000 0 0 0 0 5291500 8969900 20945000 0 19135000 12206000 10711000 13113000 25612000 12123000 16392000 16988 5066 15463 142208;142209;142210;142211;142212;142213;142214;142215;142216;142217;142218;142219;142220 113327;113328;113329;113330;113331;113332;113333;113334;113335;113336;113337;113338 113328 11 FQSEEQQQTEDELQDK Unmodified 1980.8549 0.85485849 61 CON__P02666 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 2 1 1 3 3 1 1 38.518 38.688 2;3 5.2333E-50 43826 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 204.48 198.64 + 189690000 0 0 0 16601000 18023000 20049000 11519000 15387000 7908600 9004100 15663000 24195000 37921000 5830700 7584900 16989 61 15464 142221;142222;142223;142224;142225;142226;142227;142228;142229;142230;142231;142232;142233;142234;142235;142236;142237;142238;142239;142240;142241;142242 113339;113340;113341;113342;113343;113344;113345;113346;113347;113348;113349;113350;113351;113352;113353 113349 14 FQSFQDHK Unmodified 1035.4774 0.47739386 2404 Q14331 FRG1 Protein FRG1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 23.222 19.301 2 0.022634 24570 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 118.74 75.677 49893000 42159000 0 7734300 0 0 0 0 0 0 0 0 0 0 0 0 16990 2404 15465 142243;142244 113354 113354 0 FQSGDFHVINGVLR Unmodified 1587.8158 0.81577505 1754 P55060 CSE1L Exportin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 76.438 76.59 3 0.0022428 87842 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.405 34.722 93870000 0 0 0 0 0 15484000 2840400 7361600 3666100 5634700 3955900 4114600 2260800 5635800 42916000 16991 1754 15466 142245;142246;142247;142248;142249;142250;142251;142252;142253;142254 113355;113356;113357;113358;113359 113357 5 FQSISTEFLALMK Oxidation (M) 1529.78 0.7799664 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 1 0 By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 85.842 85.982 2 0.00067694 99436 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.19 61.296 27730000 0 0 0 0 0 3494500 966010 2657000 1333600 3924000 0 6673800 0 2419300 6262300 16992 2392 15467 142255;142256;142257;142258;142259;142260;142261;142262 113360;113361 113360 3905 1 FQSIVIGCALEDQK Unmodified 1606.8025 0.80249275 693 O95816 BAG2 BAG family molecular chaperone regulator 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78.579 77.695 2 2.7835E-29 94488 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 164.9 157.77 272820000 27244000 15510000 41453000 3891900 8295200 14640000 7017200 12015000 9337800 18700000 20318000 30349000 12589000 16201000 35262000 16993 693 15468 142263;142264;142265;142266;142267;142268;142269;142270;142271;142272;142273;142274;142275;142276;142277 113362;113363;113364;113365;113366;113367;113368;113369;113370;113371;113372;113373;113374;113375;113376;113377;113378 113373 17 FQSLGVAFYR Unmodified 1186.6135 0.61349341 1647 P51149 RAB7A Ras-related protein Rab-7a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.421 77.479 2 3.9297E-32 89430 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 182.39 157.46 672900000 0 0 0 22721000 30733000 46127000 33367000 65811000 50334000 73989000 67689000 94786000 44671000 43405000 99266000 16994 1647 15469 142278;142279;142280;142281;142282;142283;142284;142285;142286;142287;142288;142289 113379;113380;113381;113382;113383;113384;113385;113386;113387;113388;113389;113390 113379 10 FQSLNADINK Unmodified 1148.5826 0.58258722 1289 P30740 SERPINB1 Leukocyte elastase inhibitor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 45.891 46.062 2 0.0015885 50462 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 103.55 72.81 199230000 0 0 0 9046600 5891700 11733000 9949000 7000200 0 11365000 25615000 23675000 12814000 15209000 66931000 16995 1289 15470 142290;142291;142292;142293;142294;142295;142296;142297;142298;142299;142300 113391;113392;113393;113394;113395;113396;113397;113398;113399;113400;113401 113394 11 FQSPAYSSVDTEETIEPYTTEK Unmodified 2521.1384 0.13841014 2929 Q6P2P2 PRMT9 Putative protein arginine N-methyltransferase 9 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 77.508 73.381 3 5.7126E-50 91259 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.48 95.317 43571000 0 43571000 0 0 0 0 0 0 0 0 0 0 0 0 0 16996 2929 15471 142301;142302 113402;113403 113402 2 FQSQPYR Unmodified 924.44537 0.44536545 692 O95801 TTC4 Tetratricopeptide repeat protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 20.252 20.434 2 0.031031 19863 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 74.191 51.568 56270000 0 0 0 4518900 3768000 0 2683900 2305100 2301600 7790800 8390200 10547000 8596100 5368300 0 16997 692 15472 142303;142304;142305;142306;142307;142308;142309;142310;142311;142312 113404 113404 1 FQSSHHPTDITSLDQYVER Unmodified 2259.0556 0.055623984 1002 P14625 HSP90B1 Endoplasmin yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 18 2 1 2 2 2 2 2 1 2 2 67.324 67.547 3;4 2.3065E-12 76557 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 97.32 88.497 592300000 0 0 0 0 0 77936000 4771100 19001000 32633000 37604000 40365000 53335000 8606900 35273000 282780000 16998 1002 15473 142313;142314;142315;142316;142317;142318;142319;142320;142321;142322;142323;142324;142325;142326;142327;142328;142329;142330 113405;113406;113407;113408;113409;113410;113411;113412;113413;113414;113415;113416;113417;113418 113411 11 FQTEDDAR Unmodified 980.41994 0.41993856 2381 Q14160 SCRIB Protein scribble homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 12.378 12.528 2 0.036499 11280 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 51.854 38.866 22824000 0 0 0 0 1749100 2774100 2500600 0 2737200 3194000 2923600 0 0 2686700 4258400 16999 2381 15474 142331;142332;142333;142334;142335;142336;142337;142338 113419 113419 1 FQTEDDARTGEK Unmodified 1395.6266 0.62663688 2381 Q14160 SCRIB Protein scribble homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.444 12.595 3 0.0023109 11819 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 55.04 45.528 81306000 0 0 0 4366600 4687200 6510900 5519600 4721100 6284400 8472300 7241500 10611000 6920400 6017000 9953700 17000 2381 15475 142339;142340;142341;142342;142343;142344;142345;142346;142347;142348;142349;142350 113420;113421;113422;113423;113424;113425;113426;113427;113428 113428 8 FQTEIQTVNK Unmodified 1206.6245 0.62445203 1009 P14868 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.018 41.196 2 5.3599E-32 45889 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 181.55 101.11 420670000 0 0 0 26763000 17818000 28172000 25773000 28408000 17933000 37348000 41890000 49998000 36162000 30017000 80384000 17001 1009 15476 142351;142352;142353;142354;142355;142356;142357;142358;142359;142360;142361;142362 113429;113430;113431;113432;113433;113434;113435;113436;113437;113438;113439 113433 10 FQTMEEK Oxidation (M) 927.40078 0.40078303 1402 P39023 RPL3 60S ribosomal protein L3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 9.3417 9.4552 2 0.015419 7714 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 86.866 72.453 117640000 0 0 0 10795000 9538100 6485700 9046000 8781100 5863600 10561000 0 19868000 14863000 10859000 10979000 17002 1402 15477 142363;142364;142365;142366;142367;142368;142369;142370;142371;142372;142373 113440;113441;113442;113443;113444;113445;113446;113447 113445 2188 8 FQTMEEK Unmodified 911.40587 0.4058684 1402 P39023 RPL3 60S ribosomal protein L3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.67 19.871 2 0.023469 20544 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 92.187 66.568 343820000 0 0 0 19105000 17391000 15784000 16307000 20941000 16516000 28949000 38102000 42262000 38358000 38731000 51372000 17003 1402 15477 142374;142375;142376;142377;142378;142379;142380;142381;142382;142383;142384;142385 113448;113449;113450;113451;113452;113453 113448 6 FQTMSDQIIGR Unmodified 1294.634 0.63397086 510 O75506 HSBP1 Heat shock factor-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 61.034 61.387 2 0.0025056 69978 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 80.755 68.708 48466000 0 0 0 0 0 0 0 0 0 2586300 5797000 5790000 0 5026100 29266000 17004 510 15478 142386;142387;142388;142389;142390 113454;113455;113456 113455 3 FQTMSDQIIGR Oxidation (M) 1310.6289 0.62888548 510 O75506 HSBP1 Heat shock factor-binding protein 1 yes yes 0 1 0 By MS/MS 10 0 1 1 45.496 46.236 2 0.0046482 50964 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.887 43.632 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17005 510 15478 142391 113457 113457 658 1 FQVATDALK Unmodified 991.53385 0.53384611 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 6.8 3.92 4 6 2 1 1 1 1 1 1 1 1 55.265 53.249 2 0.00035348 68131 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.52 90.336 901270000 9589400 697500000 7931400 27752000 19548000 29777000 29287000 0 0 39352000 0 40526000 0 0 0 17006 2459 15479 142392;142393;142394;142395;142396;142397;142398;142399;142400;142401 113458;113459;113460;113461;113462 113459 5 FQVDPSGEIVELAK Unmodified 1530.793 0.79297392 4493 Q9HB07 C12orf10 UPF0160 protein MYG1, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 82.169 82.344 2 0.00094512 95511 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 80.245 64.238 60215000 0 0 0 0 0 0 0 0 0 0 0 17489000 0 0 42726000 17007 4493 15480 142402;142403 113463;113464;113465 113465 3 FQVLLAELK Unmodified 1059.6328 0.63283187 4320 Q9H0A8 COMMD4 COMM domain-containing protein 4 yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 84.525 83.913 2 0.0036114 96896 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 109.71 85.511 167710000 43748000 0 0 0 0 11915000 8721900 10269000 10252000 17648000 11330000 17015000 8311800 8867400 19628000 17008 4320 15481 142404;142405;142406;142407;142408;142409;142410;142411;142412;142413;142414 113466;113467;113468;113469 113467 4 FQVLSVATDGK Unmodified 1163.6186 0.61863837 3825 Q96EX3 WDR34 WD repeat-containing protein 34 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 65.966 66.096 2 0.0057147 75994 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 58.37 43.219 36891000 0 0 0 0 2642700 4184800 3591800 4016000 2286800 5087100 0 4310600 3388700 0 7382900 17009 3825 15482 142415;142416;142417;142418;142419;142420;142421;142422;142423;142424;142425 113470;113471;113472;113473;113474;113475;113476;113477 113475 8 FQVSTNK Unmodified 822.42357 0.42356738 28 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 0 0 0 By matching By matching By MS/MS By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 19.347 19.558 2 0.049915 18600 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.301 16.466 28936000 0 0 0 3609100 2902000 0 0 0 3700000 0 0 7288000 814490 0 10622000 17010 28 15483 142426;142427;142428;142429;142430;142431 113478 113478 1 FQVTTTANK Unmodified 1008.524 0.52400971 4393 Q9H4A3 WNK1 Serine/threonine-protein kinase WNK1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.131 27.329 2 1.8767E-05 28705 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 134.15 102.57 543440000 0 0 0 28056000 34755000 35597000 42866000 47612000 34849000 47124000 45464000 66261000 61058000 40673000 59120000 17011 4393 15484 142432;142433;142434;142435;142436;142437;142438;142439;142440;142441;142442;142443 113479;113480;113481;113482;113483;113484;113485;113486;113487;113488;113489;113490;113491;113492;113493 113491 10 FQVVINGR Unmodified 931.52395 0.52395013 1766 P55265 ADAR Double-stranded RNA-specific adenosine deaminase yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 52.159 52.453 2 0.0097801 58232 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.784 58.475 44333000 0 0 0 0 0 4351300 2803600 2804700 2789500 6245200 5204500 5206900 0 5107100 9820000 17012 1766 15485 142444;142445;142446;142447;142448;142449;142450;142451;142452 113494;113495;113496 113495 3 FQYGNYCK Unmodified 1078.4542 0.45421558 3047 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 40.932 35.065 2 0.03676 48092 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.661 81.749 64628000 32272000 32356000 0 0 0 0 0 0 0 0 0 0 0 0 0 17013 3047 15486 142453;142454 113497 113497 0 FRAATQCEFSK Unmodified 1343.6292 0.62921983 3854 Q96GG9 DCUN1D1 DCN1-like protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 36.589 30.16 3 0.016858 41884 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 41.218 32.11 243070000 243070000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17014 3854 15487 142455 113498 113498 1 FRDNCLAILESK Unmodified 1464.7395 0.73949856 5183 Q9Y448 KNSTRN Small kinetochore-associated protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 66.101 66.321 3 0.0058015 75671 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.704 32.45 115530000 0 0 0 0 0 15456000 5822700 7174700 7334300 10780000 11130000 12855000 8272200 11530000 25172000 17015 5183 15488 142456;142457;142458;142459;142460;142461;142462;142463;142464;142465 113499;113500;113501;113502;113503;113504;113505;113506 113506 8 FRDQDLASCDRDR Unmodified 1652.7325 0.73251571 5141 Q9Y383 LUC7L2 Putative RNA-binding protein Luc7-like 2 yes yes 0 0 2 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.576 23.781 3 0.018347 24214 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.213 35.635 69410000 0 0 0 2783300 5169500 4509000 2843500 4951100 3070900 6624000 4168900 14526000 5975000 6389600 8398700 17016 5141 15489 142466;142467;142468;142469;142470;142471;142472;142473;142474;142475;142476;142477 113507;113508 113508 1 FREALGDAQQSVR Unmodified 1475.7481 0.74808942 4035 Q99615 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.817 36.998 3 0.0003414 40148 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 58.794 28.462 932160000 0 0 0 43888000 32990000 49110000 63295000 51540000 45217000 106850000 84955000 86461000 99945000 70875000 197030000 17017 4035 15490 142478;142479;142480;142481;142482;142483;142484;142485;142486;142487;142488;142489 113509;113510;113511;113512;113513;113514;113515;113516;113517;113518;113519;113520 113518 11 FREDHPDLIQNAK Unmodified 1581.79 0.78995423 1053 P17480 UBTF Nucleolar transcription factor 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 33 2 2 3 3 3 3 3 3 3 3 2 3 37.302 37.518 2;3;4 2.7483E-11 40679 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 149.31 111.61 1692500000 0 0 0 115990000 65045000 154440000 102360000 110090000 92958000 112520000 143920000 351590000 167830000 103480000 172310000 17018 1053 15491 142490;142491;142492;142493;142494;142495;142496;142497;142498;142499;142500;142501;142502;142503;142504;142505;142506;142507;142508;142509;142510;142511;142512;142513;142514;142515;142516;142517;142518;142519;142520;142521;142522 113521;113522;113523;113524;113525;113526;113527;113528;113529;113530;113531;113532;113533;113534;113535;113536;113537;113538;113539;113540;113541;113542;113543 113540 15 FREGERPSLR Unmodified 1245.6578 0.65781785 3046 Q7L2H7 EIF3M Eukaryotic translation initiation factor 3 subunit M yes yes 0 0 2 By MS/MS 10 0 1 1 22.443 23.095 3 0.031304 23271 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.819 32.276 26951000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26951000 17019 3046 15492 142523 113544 113544 0 FRELAEEAAR Unmodified 1190.6044 0.60438529 2501 Q15149 PLEC Plectin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 31.028 31.266 3 0.0059775 34163 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 54.286 40.694 127250000 0 0 0 0 6873200 13929000 9234200 10804000 7347700 10128000 9825200 23071000 9590300 10418000 16026000 17020 2501 15493 142524;142525;142526;142527;142528;142529;142530;142531;142532;142533;142534 113545;113546;113547;113548;113549;113550;113551;113552;113553 113547 7 FRGAPIIPVAAK Unmodified 1238.7499 0.74992732 1799 P57772 EEFSEC Selenocysteine-specific elongation factor yes yes 0 0 1 By matching By matching By matching By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 62.248 62.457 3 0.024593 70520 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.645 28.517 15096000 0 0 0 0 0 2688800 0 1423300 0 1797900 0 0 1490600 2313400 5381600 17021 1799 15494 142535;142536;142537;142538;142539;142540 113554 113554 1 FRGSGDTSNFDDYEEEDIRVSITEK Unmodified 2908.2999 0.29988959 1144 P22694 PRKACB cAMP-dependent protein kinase catalytic subunit beta yes yes 0 0 2 By MS/MS 2 0 1 1 78.398 70.268 4 6.5366E-06 92414 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.547 62.053 28544000 28544000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17022 1144 15495 142541 113555 113555 1 FRHGVIVAADSR Unmodified 1326.7157 0.71566708 1231 P28074 PSMB5 Proteasome subunit beta type-5 yes yes 0 0 1 By matching By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 29.259 29.63 3 0.012544 31441 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 40.725 3.5445 18970000 0 0 0 0 0 1936200 0 0 0 0 6198700 0 0 7091000 3744400 17023 1231 15496 142542;142543;142544;142545 113556 113556 1 FRHVFGQPVK Unmodified 1213.672 0.67201135 4104 Q9BR76 CORO1B Coronin-1B yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 32.506 33.228 3 0.045793 35294 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.178 25.763 29470000 0 0 0 0 0 0 0 0 0 0 0 5267300 0 0 24202000 17024 4104 15497 142546;142547 113557 113557 1 FRIDELEPR Unmodified 1173.6142 0.6142217 2441 Q14697 GANAB Neutral alpha-glucosidase AB yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 64.569 65.067 3 0.01114 73478 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.228 32.084 108710000 0 0 0 0 0 0 0 0 0 0 0 30731000 0 0 77984000 17025 2441 15498 142548;142549 113558;113559 113558 2 FRLEAPDADELPK Unmodified 1499.762 0.76200815 4061 Q99798 ACO2 Aconitate hydratase, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 76.617 71.128 3 0.0014993 92224 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.29 66.509 70028000 39814000 0 30215000 0 0 0 0 0 0 0 0 0 0 0 0 17026 4061 15499 142550;142551 113560;113561 113560 1 FRLNLYELK Unmodified 1194.6761 0.67609367 1588 P49720 PSMB3 Proteasome subunit beta type-3 yes yes 0 0 1 By MS/MS 10 0 1 1 77.185 77.449 3 0.0023768 88979 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.1 61.893 13645000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13645000 17027 1588 15500 142552 113562 113562 1 FRLPPGEYVVVPSTFEPNK Unmodified 2175.1364 0.13644049 841 P07384 CAPN1 Calpain-1 catalytic subunit yes yes 0 0 1 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 84.628 84.759 3 2.9824E-05 97964 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.302 54.445 22956000 0 0 0 0 0 4610600 0 0 0 0 3990100 0 0 3614200 10741000 17028 841 15501 142553;142554;142555;142556 113563;113564 113564 2 FRMESGIEPSVDLETLDERIK Oxidation (M) 2479.2265 0.22645406 4702 Q9NWU2 GID8 Glucose-induced degradation protein 8 homolog yes yes 0 1 2 By MS/MS 2 0 1 1 85.363 77.232 4 0.00031473 100816 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.342 46.126 22320000 22320000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17029 4702 15502 142557 113565 113565 6101 1 FRMESGIEPSVDLETLDERIK Unmodified 2463.2315 0.23153944 4702 Q9NWU2 GID8 Glucose-induced degradation protein 8 homolog yes yes 0 0 2 By MS/MS 2 0 1 1 89.445 81.314 4 0.00016816 105667 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 59.356 48.667 19445000 19445000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17030 4702 15502 142558 113566 113566 1 FRPDMEEEEAK Unmodified 1379.6027 0.60273031 4007 Q99436 PSMB7 Proteasome subunit beta type-7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.42 3.66 6 2 16 2 4 2 2 1 1 2 2 2 2 2 2 32.728 31.223 2;3 1.3876E-08 43377 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 143.24 115.5 1561800000 336490000 247740000 551380000 26791000 7733600 14966000 0 16624000 0 16584000 65525000 67109000 0 42228000 168630000 17031 4007 15503 142559;142560;142561;142562;142563;142564;142565;142566;142567;142568;142569;142570;142571;142572;142573;142574;142575;142576;142577;142578;142579;142580;142581;142582 113567;113568;113569;113570;113571;113572;113573;113574;113575;113576;113577;113578;113579;113580;113581;113582;113583;113584;113585;113586;113587;113588;113589;113590;113591 113580 22 FRPDMEEEEAK Oxidation (M) 1395.5976 0.59764493 4007 Q99436 PSMB7 Proteasome subunit beta type-7 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.03 3.82 12 2 23 4 6 4 3 1 2 2 1 2 1 3 2 3 3 20.925 19.582 2;3 0.00011717 27007 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 120.77 108.72 1198100000 245090000 264830000 434470000 29037000 4458900 15741000 14051000 7878900 11879000 5861400 33141000 40082000 0 27611000 64018000 17032 4007 15503 142583;142584;142585;142586;142587;142588;142589;142590;142591;142592;142593;142594;142595;142596;142597;142598;142599;142600;142601;142602;142603;142604;142605;142606;142607;142608;142609;142610;142611;142612;142613;142614;142615;142616;142617;142618;142619 113592;113593;113594;113595;113596;113597;113598;113599;113600;113601;113602;113603;113604;113605;113606;113607;113608;113609;113610;113611;113612;113613;113614 113602 5487 15 FRPLNESEVNRGDK Unmodified 1659.8329 0.83288168 1328 P33176 KIF5B Kinesin-1 heavy chain yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 30.482 30.671 3;4 3.1307E-50 33523 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 179.83 162.33 1153400000 0 0 0 52424000 34669000 91681000 61404000 64598000 69353000 98158000 86131000 144910000 111200000 76576000 262260000 17033 1328 15504 142620;142621;142622;142623;142624;142625;142626;142627;142628;142629;142630;142631;142632;142633;142634;142635;142636;142637;142638;142639;142640;142641;142642;142643 113615;113616;113617;113618;113619;113620;113621;113622;113623;113624;113625;113626;113627;113628;113629;113630;113631;113632;113633;113634;113635 113616 11 FRPLQLETINVTMAGK Oxidation (M) 1832.9819 0.9818541 1496 P46063 RECQL ATP-dependent DNA helicase Q1 yes yes 0 1 1 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 77.215 77.355 3 7.0743E-05 88757 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.354 59.453 29467000 0 0 0 0 0 5859700 0 0 3457600 0 0 0 0 3576800 16573000 17034 1496 15505 142644;142645;142646;142647 113636 113636 2361 1 FRPLSFEVPK Unmodified 1218.6761 0.67609367 3878 Q96IJ6 GMPPA Mannose-1-phosphate guanyltransferase alpha yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 73.087 73.248 3 0.020844 84384 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 33.039 23.607 29116000 0 0 0 0 0 7161300 0 3284100 2071600 3301200 0 0 0 3194400 10103000 17035 3878 15506 142648;142649;142650;142651;142652;142653 113637 113637 1 FRPPETTERAK Unmodified 1330.6993 0.69934831 3946 Q96P70 IPO9 Importin-9 yes yes 0 0 2 By MS/MS 2 0 2 2 25.15 20 3 6.9603E-16 29783 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 164.81 150.63 232530000 232530000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17036 3946 15507 142654;142655 113638;113639;113640;113641;113642 113641 5 FRQAQLEEGK Unmodified 1204.62 0.62003536 5001 Q9ULR0 ISY1 Pre-mRNA-splicing factor ISY1 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 20.964 21.143 3 0.0033405 21374 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.785 42.398 100650000 0 0 0 3481700 5307300 7408100 7400600 0 5168400 14593000 0 15432000 16401000 8919000 16541000 17037 5001 15508 142656;142657;142658;142659;142660;142661;142662;142663;142664;142665 113643;113644;113645;113646;113647;113648 113648 6 FRQDLMNIAGTTLSSK Oxidation (M) 1796.9091 0.90908309 1980 P78371 CCT2 T-complex protein 1 subunit beta yes yes 0 1 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.97 2.68 4 27 3 1 3 3 3 3 2 3 2 2 2 2 2 63.672 63.261 2;3 3.707E-30 71964 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 147.18 122.33 976850000 50679000 0 148490 0 29630000 129390000 59520000 54923000 57763000 145820000 60390000 119720000 84836000 62775000 121250000 17038 1980 15509 142666;142667;142668;142669;142670;142671;142672;142673;142674;142675;142676;142677;142678;142679;142680;142681;142682;142683;142684;142685;142686;142687;142688;142689;142690;142691;142692;142693;142694;142695;142696 113649;113650;113651;113652;113653;113654;113655;113656;113657;113658;113659;113660;113661;113662;113663;113664;113665;113666;113667;113668;113669;113670;113671;113672;113673;113674 113653 3193 26 FRQDLMNIAGTTLSSK Unmodified 1780.9142 0.91416847 1980 P78371 CCT2 T-complex protein 1 subunit beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 2 1 2 1 1 2 76.087 76.215 2;3 0.00017064 87364 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 108.34 92.798 338960000 0 0 0 0 4073700 21305000 6381800 15382000 11991000 24632000 15205000 27007000 11990000 18774000 182210000 17039 1980 15509 142697;142698;142699;142700;142701;142702;142703;142704;142705;142706;142707;142708;142709;142710 113675;113676;113677;113678;113679;113680;113681;113682 113677 7 FRQFGYQDSPGPR Unmodified 1553.7375 0.73752473 1045 P17028 ZNF24 Zinc finger protein 24 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 44.029 44.183 3 0.0020197 48713 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 55.899 51.185 32038000 0 0 0 0 0 19728000 0 0 0 0 0 0 0 12310000 0 17040 1045 15510 142711;142712;142713;142714 113683;113684;113685;113686 113686 4 FRQGSSTSSSPAPVEK Unmodified 1663.8166 0.81656291 3087 Q7Z3U7 MON2 Protein MON2 homolog yes yes 0 0 1 By MS/MS 2 0 1 1 23.857 18.881 3 0.00011777 26881 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.453 78.308 26936000 26936000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17041 3087 15511 142715 113687;113688 113687 2 FRQTSESTNQR Unmodified 1352.6433 0.64328999 4191 Q9BVK6 TMED9 Transmembrane emp24 domain-containing protein 9 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.5982 6.7218 3 2.054E-28 4055 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 150.46 141.64 159270000 0 0 0 5689400 10092000 5241300 11145000 16427000 8564900 13046000 13936000 22953000 17935000 14055000 20190000 17042 4191 15512 142716;142717;142718;142719;142720;142721;142722;142723;142724;142725;142726;142727 113689;113690;113691;113692;113693;113694;113695;113696;113697;113698;113699 113691 11 FRREEDAEK Unmodified 1178.568 0.56799978 909 P0DN76;Q01081 U2AF1 Splicing factor U2AF 35 kDa subunit yes no 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 5.734 5.8932 3 0.029033 3062 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 103.55 69.671 269380000 0 0 0 71723000 0 0 0 0 0 0 35959000 56901000 0 33794000 71003000 17043 909 15513 142728;142729;142730;142731;142732 113700;113701;113702;113703;113704 113700 5 FRSETITEEELVGLMNK Unmodified 1994.9983 0.99829203 1033 P16152 CBR1 Carbonyl reductase [NADPH] 1 yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 2 2 2 2 88.708 83.75 3 2.0228E-87 106226 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 159.88 149.41 148520000 95187000 53332000 0 0 0 0 0 0 0 0 0 0 0 0 0 17044 1033 15514 142733;142734;142735;142736 113705;113706;113707;113708;113709;113710;113711 113710 7 FRSETITEEELVGLMNK Oxidation (M) 2010.9932 0.99320665 1033 P16152 CBR1 Carbonyl reductase [NADPH] 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 2 3 1 78.849 73.539 2;3 2.13E-46 94573 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 136.01 125.64 160620000 108610000 44192000 7816600 0 0 0 0 0 0 0 0 0 0 0 0 17045 1033 15514 142737;142738;142739;142740;142741;142742 113712;113713;113714;113715 113713 1458 3 FRSFDDEEIQK Unmodified 1412.6572 0.65720872 372 O43823 AKAP8 A-kinase anchor protein 8 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 44.064 43.294 3 1.2594E-07 55072 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 138.63 134.28 240650000 15099000 0 16590000 14346000 12155000 13964000 11933000 10831000 12742000 24731000 23575000 30679000 27726000 0 26279000 17046 372 15515 142743;142744;142745;142746;142747;142748;142749;142750;142751;142752;142753;142754;142755 113716;113717;113718;113719;113720 113720 4 FRSHEGETAYIR Unmodified 1464.711 0.71097563 2145 Q07955 SRSF1 Serine/arginine-rich splicing factor 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 25.912 26.242 3 0.00038176 28036 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 77.644 43.676 78353000 0 0 0 0 0 5272800 0 2971600 4199900 5286500 10142000 6946800 9358700 5670300 28504000 17047 2145 15516 142756;142757;142758;142759;142760;142761;142762;142763;142764 113721;113722;113723;113724;113725 113724 5 FRSTGLELETPSLVPVK Unmodified 1872.0357 0.03566381 3955 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 81.671 81.027 3 0.00036944 93532 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.284 45.366 145620000 39785000 0 0 0 4186100 9662700 6950800 12221000 11422000 0 10716000 11095000 5512500 10715000 23349000 17048 3955 15517 142765;142766;142767;142768;142769;142770;142771;142772;142773;142774;142775 113726;113727;113728;113729;113730;113731;113732;113733;113734;113735 113726 10 FRTEAAAAAPQR Unmodified 1287.6684 0.66838253 694 O95817 BAG3 BAG family molecular chaperone regulator 3 yes yes 0 0 1 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.826 22.032 3 0.009371 23022 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 59.13 45.717 330460000 0 0 0 18060000 14623000 23323000 29779000 19857000 16262000 32526000 45438000 31966000 29688000 28197000 40743000 17049 694 15518 142776;142777;142778;142779;142780;142781;142782;142783;142784;142785;142786;142787 113736;113737;113738;113739;113740;113741;113742 113740 1 FRTICSSVDK Unmodified 1211.5969 0.59685707 961 P12081 HARS Histidine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS 2 0 2 2 37.498 31.001 2;3 9.4754E-05 43412 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 141.1 91.998 305170000 305170000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17050 961 15519 142788;142789 113743;113744 113744 1 FRVAGINACGR Unmodified 1219.6244 0.62440923 1663 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes yes 0 0 1 By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.115 45.284 3 0.013125 50680 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 33.057 20.481 63958000 0 0 0 2992900 4343600 5495900 5137000 5238800 3435700 3433200 7461100 7310600 6209300 4540200 8359600 17051 1663 15520 142790;142791;142792;142793;142794;142795;142796;142797;142798;142799;142800;142801 113745;113746;113747 113746 2 FRVLPQPTNLATPNTK Unmodified 1795.9945 0.9944677 1739 P54278 PMS2 Mismatch repair endonuclease PMS2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 1 2 2 2 2 2 2 1 2 2 1 67.952 68.06 3 0.0091947 77232 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 34.928 30.826 155640000 0 0 0 7318900 4755700 21339000 11823000 10865000 12886000 20842000 15433000 7532500 12731000 12484000 17626000 17052 1739 15521 142802;142803;142804;142805;142806;142807;142808;142809;142810;142811;142812;142813;142814;142815;142816;142817;142818;142819;142820;142821 113748;113749;113750;113751;113752;113753;113754;113755;113756;113757 113757 10 FSADEFFIPR Unmodified 1227.5924 0.59242362 3245 Q8IWT0 ZBTB8OS Protein archease yes yes 0 0 0 By MS/MS 10 0 1 1 85.21 85.378 2 0.0035119 98643 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.221 65.511 4656700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4656700 17053 3245 15522 142822 113758 113758 1 FSADEFFIPREVK Unmodified 1583.7984 0.79839365 3245 Q8IWT0 ZBTB8OS Protein archease yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 88.423 81.937 3 0.02328 103903 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 35.803 29.116 28224000 15748000 12476000 0 0 0 0 0 0 0 0 0 0 0 0 0 17054 3245 15523 142823;142824 113759;113760 113759 2 FSADLTCR Unmodified 968.43857 0.43856552 3038 Q7KZ85 SUPT6H Transcription elongation factor SPT6 yes yes 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 40.033 40.218 2 0.026168 43550 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.119 16.892 44352000 0 0 0 3801500 1965000 0 2363900 0 0 4424200 7162300 10094000 0 6403800 8137400 17055 3038 15524 142825;142826;142827;142828;142829;142830;142831;142832 113761 113761 1 FSAFLEK Unmodified 840.43815 0.43815481 939 P11216 PYGB Glycogen phosphorylase, brain form yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 61.846 55.86 2 0.031384 76032 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.55 50.758 170310000 98011000 34605000 37691000 0 0 0 0 0 0 0 0 0 0 0 0 17056 939 15525 142833;142834;142835 113762;113763 113762 2 FSAGGDSDPPLK Unmodified 1189.5615 0.56151742 464 O75152 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 39.576 38.959 2 0.00030361 48636 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.692 80.535 323660000 0 76328000 0 0 0 0 23806000 21128000 17330000 25987000 31852000 38075000 35302000 23062000 30794000 17057 464 15526 142836;142837;142838;142839;142840;142841;142842;142843;142844;142845;142846;142847 113764;113765;113766;113767;113768;113769;113770;113771;113772;113773 113767 10 FSAHYDAVEAELK Unmodified 1478.7042 0.70415892 2403;5081 Q14320;Q9Y247 FAM50A;FAM50B Protein FAM50A;Protein FAM50B no no 0 0 0 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 2 2 2 66.268 60.477 2;3 9.6697E-06 80564 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.015 67.288 322990000 36400000 39892000 246690000 0 0 0 0 0 0 0 0 0 0 0 0 17058 2403;5081 15527 142848;142849;142850;142851;142852;142853 113774;113775;113776;113777;113778;113779;113780;113781;113782;113783 113778 10 FSAIQCAAAVPR Unmodified 1289.655 0.65504065 2489 Q15054 POLD3 DNA polymerase delta subunit 3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 61.195 61.319 2 0.00014055 69843 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 100.25 80.469 42184000 0 0 0 0 3066100 4358300 3329300 0 3322900 0 5379200 11204000 6513300 5011700 0 17059 2489 15528 142854;142855;142856;142857;142858;142859;142860;142861;142862 113784;113785;113786;113787;113788;113789;113790 113790 6 FSAIQCAAAVPRAPAESSSSSK Unmodified 2221.0797 0.079730244 2489 Q15054 POLD3 DNA polymerase delta subunit 3 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 65.216 59.189 3 5.9652E-40 79039 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 123.12 99.395 29676000 28152000 0 1524200 0 0 0 0 0 0 0 0 0 0 0 0 17060 2489 15529 142863;142864 113791;113792 113792 2 FSAIQMQLK Unmodified 1064.5689 0.56885141 1413 P40425;Q9BYU1 PBX2;PBX4 Pre-B-cell leukemia transcription factor 2;Pre-B-cell leukemia transcription factor 4 yes no 0 0 0 By MS/MS 2 0 1 1 75.687 67.557 2 0.0073818 89042 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.352 52.438 10191000 10191000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17061 1413 15530 142865 113793 113793 1 FSALQPPAPSGSTPSTPVEFDSRR Unmodified 2530.2452 0.24521567 329 O43432 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 75.49 75.517 3 1.1291E-11 86997 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 67.251 50.951 91688000 0 0 0 4474400 6191300 10661000 7388000 8855900 10947000 0 9635600 0 8350300 0 25185000 17062 329 15531 142866;142867;142868;142869;142870;142871;142872;142873;142874 113794;113795;113796;113797;113798;113799;113800;113801;113802;113803;113804 113800 10 FSALQQAVPTESTDNR Unmodified 1762.8486 0.84859132 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.944 59.054 2 2.19E-27 67083 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 129.82 107.62 195760000 0 0 0 10595000 10982000 14163000 12809000 11667000 11135000 16862000 20736000 23034000 23977000 17613000 22191000 17063 2102 15532 142875;142876;142877;142878;142879;142880;142881;142882;142883;142884;142885;142886 113805;113806;113807;113808;113809;113810;113811;113812;113813;113814;113815;113816;113817;113818 113811 13 FSALQQAVPTESTDNRR Unmodified 1918.9497 0.94970235 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 1 2 1 1 2 2 2 2 2 2 2 51.111 51.338 2;3 1.6095E-81 57286 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 208.95 189.82 8961300000 0 0 0 424300000 530820000 603370000 597390000 674720000 612510000 840500000 860460000 1099700000 753260000 767660000 1196600000 17064 2102 15533 142887;142888;142889;142890;142891;142892;142893;142894;142895;142896;142897;142898;142899;142900;142901;142902;142903;142904;142905;142906 113819;113820;113821;113822;113823;113824;113825;113826;113827;113828;113829;113830;113831;113832;113833;113834;113835;113836;113837;113838;113839;113840;113841;113842;113843;113844 113837 26 FSAPVVPSSFNFGGPAPGMN Oxidation (M) 1994.9196 0.91964777 649 O95373 IPO7 Importin-7 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 91.409 90.63 2 1.3997E-06 110212 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.622 53.254 526440000 0 220040000 0 6437300 23533000 0 20944000 23614000 0 65390000 0 54595000 0 29870000 82015000 17065 649 15534 142907;142908;142909;142910;142911;142912;142913;142914;142915;142916 113845;113846;113847;113848;113849 113846 791 5 FSAPVVPSSFNFGGPAPGMN Unmodified 1978.9247 0.92473315 649 O95373 IPO7 Importin-7 yes yes 0 0 0 By MS/MS 2 0 1 1 96.059 91.237 2 1.561E-17 113008 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.59 83.805 259150000 0 259150000 0 0 0 0 0 0 0 0 0 0 0 0 0 17066 649 15534 142917 113850 113850 1 FSASGELGNGNIK Unmodified 1292.6361 0.63607935 959 P12004 PCNA Proliferating cell nuclear antigen yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.16 3.73 5 2 12 2 4 1 1 1 1 1 1 1 1 1 1 1 1 1 48.194 46.432 2 4.7148E-75 52668 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 192.26 174.04 4500500000 145640000 3366500000 81426000 40888000 23867000 23922000 29189000 38301000 24724000 46438000 162000000 94544000 39710000 74253000 309140000 17067 959 15535 142918;142919;142920;142921;142922;142923;142924;142925;142926;142927;142928;142929;142930;142931;142932;142933;142934;142935;142936 113851;113852;113853;113854;113855;113856;113857;113858;113859;113860;113861;113862;113863;113864;113865;113866;113867;113868;113869;113870;113871;113872;113873;113874;113875;113876;113877;113878 113854 27 FSASSGGGGSR Unmodified 968.43117 0.43117195 1974 P78344 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 7.6242 7.7924 2 3.0126E-05 5755 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 118.18 107.76 516920000 0 0 0 0 0 69577000 80564000 49773000 70600000 0 133610000 58966000 0 0 53824000 17068 1974 15536 142937;142938;142939;142940;142941;142942;142943;142944;142945 113879;113880;113881;113882;113883;113884;113885;113886;113887 113882 9 FSATEVTNK Unmodified 995.49238 0.49237523 3308 Q8N163 CCAR2 Cell cycle and apoptosis regulator protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.432 29.624 2 0.0021081 32080 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 128.61 103.93 529930000 0 0 0 28584000 28206000 33004000 42918000 31747000 32426000 48594000 49012000 59410000 55090000 49334000 71604000 17069 3308 15537 142946;142947;142948;142949;142950;142951;142952;142953;142954;142955;142956;142957 113888;113889;113890;113891;113892;113893;113894;113895;113896;113897;113898;113899;113900 113895 12 FSATPRYMTYN Unmodified 1349.6074 0.60742176 1369 P35998 PSMC2 26S protease regulatory subunit 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 61.954 55.962 2 0.017674 74819 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.998 77.263 276190000 208790000 59615000 7782300 0 0 0 0 0 0 0 0 0 0 0 0 17070 1369 15538 142958;142959;142960 113901;113902;113903 113902 2 FSAVLVEPPPMSLPGAGLSSQELSGGPGDGP Oxidation (M) 2965.4379 0.4379034 2262 Q13263 TRIM28 Transcription intermediary factor 1-beta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.83 3.76 2 1 9 1 2 1 1 1 1 1 1 1 1 1 95.371 95.546 2;3 2.0899E-214 112415 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 202.26 198.42 182720000 36260000 37503000 0 1934900 0 2747700 3737500 5078300 2992800 55850000 27275000 0 2088500 7252300 0 17071 2262 15539 142961;142962;142963;142964;142965;142966;142967;142968;142969;142970;142971;142972 113904;113905;113906;113907 113905 3683 4 FSAVLVEPPPMSLPGAGLSSQELSGGPGDGP Unmodified 2949.443 0.44298878 2262 Q13263 TRIM28 Transcription intermediary factor 1-beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.43 3.99 1 2 1 3 1 2 1 1 1 1 98.741 98.06 3 5.0899E-67 115802 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.107 55.384 1623900000 101030000 1506400000 5047900 0 0 0 0 0 0 5661600 3815400 0 0 0 2009800 17072 2262 15539 142973;142974;142975;142976;142977;142978;142979 113908;113909;113910;113911;113912;113913;113914 113910 7 FSCGASVTGEDEIIIQGDFTDDIIDVIQEK Unmodified 3313.5548 0.55478365 343 O43583 DENR Density-regulated protein yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 99.322 96.335 3 9.9534E-13 99683 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 63.901 54.104 8415000 4644100 0 3770900 0 0 0 0 0 0 0 0 0 0 0 0 17073 343 15540 142980;142981 113915;113916;113917 113915 3 FSCLGTTDK Unmodified 1027.4644 0.46444592 4417 Q9H6K1 C6orf106 Uncharacterized protein C6orf106 yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 29.92 27.653 2 0.0054868 36361 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.11 61.261 47801000 99175 47702000 0 0 0 0 0 0 0 0 0 0 0 0 0 17074 4417 15541 142982;142983 113918;113919;113920 113919 3 FSCTDCEPMVIDK Unmodified 1600.6572 0.65715042 4982 Q9UL03 INTS6 Integrator complex subunit 6 yes yes 0 0 0 By MS/MS 2 0 1 1 62.519 56.626 2 0.0031913 72651 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.24 81.267 34479000 0 34479000 0 0 0 0 0 0 0 0 0 0 0 0 0 17075 4982 15542 142984 113921 113921 1 FSDAGQPMSFVLEFHFEPNEYFTNEVLTK Unmodified 3422.5805 0.58054489 1761 P55209 NAP1L1 Nucleosome assembly protein 1-like 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 99.68 93.852 3;4 1.0052E-07 118510 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.674 50.471 33325000 33325000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17076 1761 15543 142985;142986 113922;113923 113923 2 FSDAGQPMSFVLEFHFEPNEYFTNEVLTK Oxidation (M) 3438.5755 0.57545951 1761 P55209 NAP1L1 Nucleosome assembly protein 1-like 1 yes yes 0 1 0 By MS/MS 2 0 1 1 98.695 90.565 3 4.9857E-30 116794 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.28 84.998 37160000 37160000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17077 1761 15543 142987 113924 113924 2876 1 FSDAIQSK Unmodified 894.4447 0.44469675 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 22.92 23.248 2 0.011374 23449 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.072 44.944 52265000 0 0 0 3914300 0 0 0 0 3753600 5561400 8614900 7347500 7941900 6401300 8730200 17078 2446 15544 142988;142989;142990;142991;142992;142993;142994;142995 113925;113926;113927;113928 113926 4 FSDDAAEPNNDAEALVNGFEHGGLAK Unmodified 2687.21 0.20995237 3495 Q8TD16 BICD2 Protein bicaudal D homolog 2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 89.256 85.203 3 2.4538E-06 106151 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 37.934 29.845 48882000 0 48882000 0 0 0 0 0 0 0 0 0 0 0 0 0 17079 3495 15545 142996;142997 113929;113930 113929 2 FSDDRVCK Unmodified 1025.46 0.46002924 5141 Q9Y383 LUC7L2 Putative RNA-binding protein Luc7-like 2 yes yes 0 0 1 By matching By MS/MS 2 0 2 1 1 14.411 11.588 2 0.015632 14910 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 120.46 86.284 37353000 0 18735000 18618000 0 0 0 0 0 0 0 0 0 0 0 0 17080 5141 15546 142998;142999 113931 113931 1 FSDFLGLHSK Unmodified 1149.5819 0.58185893 428 O60749 SNX2 Sorting nexin-2 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.27 65.358 3 0.0068581 74880 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 55.401 48.512 125800000 0 0 0 5790900 3629100 16652000 8592800 9795600 7544700 9861200 8994700 10454000 9588500 10383000 24511000 17081 428 15547 143000;143001;143002;143003;143004;143005;143006;143007;143008;143009;143010;143011 113932;113933;113934 113932 3 FSDFLGLYEK Unmodified 1217.5968 0.5968403 2323 Q13596 SNX1 Sorting nexin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 82.905 83.052 2 0.0040476 95822 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.267 51.743 56591000 0 0 0 0 0 0 0 0 0 0 0 19817000 0 13661000 23113000 17082 2323 15548 143012;143013;143014;143015;143016;143017;143018 113935;113936;113937;113938;113939;113940 113936 6 FSDIQIR Unmodified 877.46577 0.46576654 953 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 18 1 1 1 2 2 1 2 1 2 2 2 1 47.458 47.662 2 0.015408 52724 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 118.01 10.266 294620000 0 0 0 16011000 10372000 21395000 26912000 25610000 15784000 23188000 24652000 35364000 24736000 24611000 45987000 17083 953 15549 143019;143020;143021;143022;143023;143024;143025;143026;143027;143028;143029;143030;143031;143032;143033;143034;143035;143036 113941;113942;113943;113944;113945;113946;113947 113947 2 FSDKEEHEQNDSISGK Unmodified 1848.8126 0.81259975 3631 Q92576 PHF3 PHD finger protein 3 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 18.424 14.889 3 0.006652 21521 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.883 39.988 9994000 6422400 0 3571600 0 0 0 0 0 0 0 0 0 0 0 0 17084 3631 15550 143037;143038 113948 113948 1 FSDLDEQCDSSSLSSK Unmodified 1803.7469 0.74688795 1026 P15822 HIVEP1 Zinc finger protein 40 yes yes 0 0 0 By MS/MS 2 0 1 1 47.268 41.705 2 1.3711E-42 54367 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 204.49 189.81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17085 1026 15551 143039 113949 113949 1 FSDLFSLAEEYEDSSTKPPK Unmodified 2289.0689 0.068874011 2860 Q68E01 INTS3 Integrator complex subunit 3 yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 94.011 88.332 3 7.4691E-09 112490 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.231 74.857 26242000 24238000 2004100 0 0 0 0 0 0 0 0 0 0 0 0 0 17086 2860 15552 143040;143041 113950;113951 113951 2 FSDQFPLPLK Unmodified 1190.6336 0.63356015 3692 Q92973 TNPO1 Transportin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 83.693 83.757 2 3.9338E-23 97073 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 172.21 147.29 1088400000 0 0 0 37995000 39863000 100690000 69683000 80953000 68524000 123010000 106020000 124450000 76330000 95516000 165380000 17087 3692 15553 143042;143043;143044;143045;143046;143047;143048;143049;143050;143051;143052;143053;143054 113952;113953;113954;113955;113956;113957;113958;113959;113960;113961;113962;113963;113964;113965;113966;113967;113968 113960 17 FSDSEIGGITIAHVIR Unmodified 1713.905 0.90498399 1449 P42226 STAT6 Signal transducer and activator of transcription 6 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 80.871 81.033 3 0.0030375 93375 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 31.42 25.516 8375400 0 0 0 0 0 0 0 0 0 0 0 0 0 1662500 6712900 17088 1449 15554 143055;143056 113969 113969 1 FSDSYASVIK Unmodified 1115.5499 0.5498901 1061 P17812 CTPS1 CTP synthase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS 7.91 3.42 2 1 8 2 1 1 1 1 1 1 1 1 1 59.106 57.997 2 0.0015959 65569 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 93.649 73.129 1165700000 0 890020000 23656000 0 0 37427000 16319000 0 6643000 31088000 38775000 33297000 24917000 0 63581000 17089 1061 15555 143057;143058;143059;143060;143061;143062;143063;143064;143065;143066;143067 113970;113971;113972;113973;113974;113975 113975 4 FSDVLHTIK Unmodified 1058.576 0.57604528 1083 P19174 PLCG1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 60.711 54.664 2 0.01129 67641 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 85.161 59.711 37065000 28990000 0 8075200 0 0 0 0 0 0 0 0 0 0 0 0 17090 1083 15556 143068;143069;143070 113976;113977;113978 113978 3 FSEAEHWLDYFPPLAIQDLK Unmodified 2418.1896 0.18959827 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS 3 0 1 1 98.858 95.507 3 0.011989 114536 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 28.505 23.852 11735000 0 11735000 0 0 0 0 0 0 0 0 0 0 0 0 0 17091 4819 15557 143071 113979 113979 1 FSEEQRFNNFLK Unmodified 1557.7576 0.75759147 974 P13010 XRCC5 X-ray repair cross-complementing protein 5 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.35 3.6 3 3 11 4 2 1 1 1 1 1 1 1 1 1 1 1 69.476 67.589 2;3 0.0048333 88040 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.121 46.535 753940000 423610000 170910000 0 3032700 0 17788000 6892000 7492500 9778700 8881500 12799000 20343000 9412400 12200000 50806000 17092 974 15558 143072;143073;143074;143075;143076;143077;143078;143079;143080;143081;143082;143083;143084;143085;143086;143087;143088 113980;113981;113982;113983;113984;113985;113986;113987;113988;113989 113982 10 FSEERDPELSTVCRK Unmodified 1851.8785 0.87851124 3390 Q8NBA8 DTWD2 DTW domain-containing protein 2 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 36.618 36.799 3;4 0.00043238 40583 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 76.01 62.461 269290000 0 0 0 14700000 16525000 17221000 23933000 24777000 14271000 18495000 21924000 33810000 31835000 24668000 27131000 17093 3390 15559 143089;143090;143091;143092;143093;143094;143095;143096;143097;143098;143099;143100;143101;143102;143103;143104;143105;143106;143107;143108;143109;143110;143111;143112 113990;113991;113992;113993 113992 4 FSEFYSK Unmodified 906.41233 0.41233399 3568 Q8WVY7 UBLCP1 Ubiquitin-like domain-containing CTD phosphatase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.024 40.204 2 0.039143 44974 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 69.176 55.18 73356000 0 0 0 3487200 2768200 5776200 4864300 4673100 3483500 9350200 7605200 8763000 6061800 4101700 12422000 17094 3568 15560 143113;143114;143115;143116;143117;143118;143119;143120;143121;143122;143123;143124 113994;113995 113994 2 FSEGEATLR Unmodified 1008.4876 0.4876242 1528 P47897 QARS Glutamine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 34.897 34.283 2 0.003482 36803 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 107.01 75.718 539700000 0 155600000 7497300 22082000 18845000 38868000 0 0 22312000 48143000 66688000 46899000 0 33011000 79750000 17095 1528 15561 143125;143126;143127;143128;143129;143130;143131;143132;143133;143134;143135 113996;113997;113998;113999;114000;114001;114002;114003;114004;114005 114002 8 FSEGEATLRMK Unmodified 1267.6231 0.62307182 1528 P47897 QARS Glutamine--tRNA ligase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 47.952 42.18 3 0.00051505 58006 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.962 67.075 251050000 148150000 55293000 47610000 0 0 0 0 0 0 0 0 0 0 0 0 17096 1528 15562 143136;143137;143138 114006;114007;114008 114007 3 FSEGEATLRMK Oxidation (M) 1283.618 0.61798644 1528 P47897 QARS Glutamine--tRNA ligase yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2 0 6 2 1 3 32.866 28.398 2;3 0.0037625 39352 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.355 57.407 207110000 72643000 38474000 95998000 0 0 0 0 0 0 0 0 0 0 0 0 17097 1528 15562 143139;143140;143141;143142;143143;143144 114009;114010;114011;114012;114013 114010 2428 3 FSEGTSADREIQR Unmodified 1494.7063 0.70628418 1898 P62333 PSMC6 26S protease regulatory subunit 10B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 26.914 27.111 2;3 2.6715E-14 28148 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 109 103.09 1432000000 0 0 0 88156000 125610000 146820000 52575000 37282000 32491000 187540000 246720000 296130000 46123000 53636000 118920000 17098 1898 15563 143145;143146;143147;143148;143149;143150;143151;143152;143153;143154;143155;143156;143157;143158;143159;143160;143161;143162;143163;143164;143165;143166;143167;143168 114014;114015;114016;114017;114018;114019;114020;114021;114022;114023;114024;114025;114026;114027 114017 8 FSEGVLQSPSQDQEK Unmodified 1677.7846 0.78459408 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.462 48.623 2 8.2056E-84 53716 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 188.96 172.71 371020000 0 0 0 23921000 21007000 22149000 24557000 21364000 21377000 37884000 40963000 51190000 25647000 26850000 54111000 17099 4285 15564 143169;143170;143171;143172;143173;143174;143175;143176;143177;143178;143179;143180 114028;114029;114030;114031;114032;114033;114034;114035;114036;114037;114038;114039;114040 114031 13 FSEILETSSTK Unmodified 1240.6187 0.61869795 2989 Q6W2J9 BCOR BCL-6 corepressor yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 49.023 49.746 2 0.0065871 55358 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 89.679 69.902 12170000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12170000 17100 2989 15565 143181;143182 114041;114042 114042 1 FSEIPQR Unmodified 875.45012 0.45011648 3856;2969 Q96GM5;Q6STE5 SMARCD1;SMARCD3 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1;SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 32.697 32.737 2 0.018785 35959 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 111.28 76.173 58895000 0 0 0 5042700 6383300 9728800 7826200 8847800 4965500 0 7111700 0 0 8988800 0 17101 3856;2969 15566 143183;143184;143185;143186;143187;143188;143189;143190 114043;114044;114045;114046 114043 4 FSEIYHNINADQSK Unmodified 1664.7794 0.77944912 1219 P27540 ARNT Aryl hydrocarbon receptor nuclear translocator yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 44.641 44.829 3 0.00023065 50121 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 61.641 54.75 108200000 0 0 0 0 10735000 14398000 0 15433000 0 11180000 15791000 0 0 9905000 30759000 17102 1219 15567 143191;143192;143193;143194;143195;143196;143197 114047;114048;114049;114050;114051;114052;114053 114051 7 FSELPTQMFPEGATPAEITK Oxidation (M) 2209.0613 0.061286213 5132 Q9Y312 AAR2 Protein AAR2 homolog yes yes 0 1 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 80.229 80.262 2 2.3971E-11 92559 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.703 74.664 67028000 0 0 0 2935600 4323800 10458000 3927600 5205200 0 8404700 0 10746000 6048600 6473800 8503900 17103 5132 15568 143198;143199;143200;143201;143202;143203;143204;143205;143206;143207 114054;114055;114056;114057;114058;114059 114056 6521 6 FSELSEELLWEYVHSGEPMDK Oxidation (M) 2540.1417 0.14172138 678 O95671 ASMTL N-acetylserotonin O-methyltransferase-like protein yes yes 0 1 0 By MS/MS 2 0 1 1 96.839 88.709 3 2.4374E-19 114571 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 106.49 103.28 48300000 48300000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17104 678 15569 143208 114060;114061 114061 821 2 FSELTAEK Unmodified 923.46001 0.46001246 1548 P48643 CCT5 T-complex protein 1 subunit epsilon yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.294 30.484 2 0.0068047 33251 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 96.111 70.284 2106200000 0 0 0 77191000 70464000 198300000 123810000 93920000 83986000 209990000 229060000 216310000 152020000 218590000 432540000 17105 1548 15570 143209;143210;143211;143212;143213;143214;143215;143216;143217;143218;143219;143220 114062;114063;114064;114065;114066;114067;114068;114069;114070;114071;114072;114073;114074 114065 8 FSENRCQK Unmodified 1067.4818 0.48182731 3413 Q8ND04 SMG8 Protein SMG8 yes yes 0 0 1 By MS/MS 2 0 1 1 6.8988 3.4666 2 0.044128 6540 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 138.33 89.546 41254000 41254000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17106 3413 15571 143221 114075 114075 1 FSEQGGTPQNVATSSSLTAHLR Unmodified 2287.1193 0.11928687 4345 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.857 62.952 3 3.0359E-54 72337 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 115.39 106.14 206140000 0 0 0 6908900 9882900 18256000 12874000 10944000 12156000 27575000 15848000 20034000 21901000 22084000 27674000 17107 4345 15572 143222;143223;143224;143225;143226;143227;143228;143229;143230;143231;143232;143233 114076;114077;114078;114079;114080;114081;114082;114083;114084;114085;114086;114087;114088 114084 13 FSEVAAVSEK Unmodified 1065.5342 0.53424004 3964 Q96R06 SPAG5 Sperm-associated antigen 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 37.438 37.563 2 0.003863 41285 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 74.941 50.018 102030000 0 0 0 9563400 6392600 10127000 8816700 0 8472200 9974800 13116000 0 13794000 9865100 11906000 17108 3964 15573 143234;143235;143236;143237;143238;143239;143240;143241;143242;143243 114089;114090;114091;114092;114093;114094;114095;114096;114097;114098 114094 10 FSFDLGK Unmodified 812.40685 0.40685468 2080 Q02790 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70.138 69.632 2 0.024035 78781 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.614 18.838 4237500000 0 2770300000 417450000 34307000 24667000 72719000 50433000 38703000 41541000 69049000 127890000 143210000 65530000 108980000 272700000 17109 2080 15574 143244;143245;143246;143247;143248;143249;143250;143251;143252;143253;143254;143255;143256;143257 114099;114100;114101;114102;114103 114101 5 FSFITHLQDK Unmodified 1234.6346 0.63462279 2852 Q68CP9 ARID2 AT-rich interactive domain-containing protein 2 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 67.176 67.435 3 0.024464 76418 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.533 24.526 28340000 0 0 0 0 0 0 0 0 3326500 3940200 0 5453400 4008400 3527800 8083300 17110 2852 15575 143258;143259;143260;143261;143262;143263 114104;114105;114106;114107 114104 4 FSFQCPGR Unmodified 997.44399 0.44398525 2284 Q13418 ILK Integrin-linked protein kinase yes yes 0 0 0 By MS/MS By MS/MS 10 0 3 2 1 50.406 51.12 2 0.011165 56870 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.66 90.097 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17111 2284 15576 143264;143265;143266 114108;114109;114110 114108 3 FSFSPEPTLEDIR Unmodified 1536.746 0.74602373 4429 Q9H773 DCTPP1 dCTP pyrophosphatase 1 yes yes 0 0 0 By MS/MS 10 0 1 1 83.706 83.896 2 0.010266 96763 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.958 36.83 6964800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6964800 17112 4429 15577 143267 114111 114111 1 FSFSPEPTLEDIRR Unmodified 1692.8471 0.84713476 4429 Q9H773 DCTPP1 dCTP pyrophosphatase 1 yes yes 0 0 1 By matching By matching By matching By matching By matching By matching By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 78.397 78.535 3 8.932E-28 90301 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 146.79 123.37 89028000 0 0 0 0 0 4405600 0 3502900 0 3265200 6755900 7205400 2500200 7140100 54253000 17113 4429 15578 143268;143269;143270;143271;143272;143273;143274;143275 114112 114112 1 FSGAVLNVPDTSDNSK Unmodified 1649.7897 0.78967946 5247 Q9Y5S2 CDC42BPB Serine/threonine-protein kinase MRCK beta yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.12 3.72 2 1 5 2 1 1 1 1 1 1 65.838 63.597 2 8.0561E-11 80331 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 139.78 127.91 170590000 0 147240000 1241700 0 0 0 5746100 4546800 0 0 0 0 0 0 11817000 17114 5247 15579 143276;143277;143278;143279;143280;143281;143282;143283 114113;114114;114115;114116;114117;114118 114114 6 FSGDLDDQTCR Unmodified 1312.5354 0.53537903 811 P05455 SSB Lupus La protein yes yes 0 0 0 By MS/MS 10 0 1 1 31.769 32.478 2 0.040932 34507 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.684 31.202 2595600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2595600 17115 811 15580 143284 114119 114119 1 FSGDLDDQTCREDLHILFSNHGEIK Unmodified 2945.3614 0.36138441 811 P05455 SSB Lupus La protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.5 0.5 3 3 4 1 1 83.837 78.945 4;5 0.0036753 101382 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 33.075 26.642 263200000 257280000 2940900 2972300 0 0 0 0 0 0 0 0 0 0 0 0 17116 811 15581 143285;143286;143287;143288;143289;143290 114120;114121;114122;114123;114124 114122 4 FSGEEGEIEDDESGTENREEK Unmodified 2384.9728 0.97280137 5122 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.43 2.06 1 13 1 1 1 1 1 2 1 1 1 1 1 1 1 35.181 35.363 3 8.5129E-55 43969 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 135.38 133.8 158890000 0 0 0 8686700 6336200 12037000 9678500 12519000 7398900 19299000 13989000 24836000 10979000 10783000 22345000 17117 5122 15582 143291;143292;143293;143294;143295;143296;143297;143298;143299;143300;143301;143302;143303;143304 114125;114126;114127;114128;114129;114130;114131;114132;114133;114134;114135;114136;114137;114138 114127 14 FSGEELDK Unmodified 923.42363 0.42362696 1284 P30533 LRPAP1 Alpha-2-macroglobulin receptor-associated protein yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 26.965 27.266 2 0.017697 28987 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 65.246 39.42 37800000 0 0 0 0 3733300 0 2756100 0 0 0 6530900 7908600 0 5964000 10907000 17118 1284 15583 143305;143306;143307;143308;143309;143310 114139;114140;114141 114140 3 FSGFGSGAGGK Unmodified 970.45084 0.45084476 4978 Q9UKX7 NUP50 Nuclear pore complex protein Nup50 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 31.731 32.044 2 0.0020981 33959 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 69.276 31.63 6575800 0 0 0 0 0 0 0 0 0 0 0 0 0 6575800 0 17119 4978 15584 143311;143312 114142;114143;114144 114143 3 FSGGFGAR Unmodified 797.38204 0.38203692 170 O00571;O15523 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 30.14 30.284 2 0.0052037 32575 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 107.74 107.74 607520000 0 0 0 51998000 42848000 48859000 46096000 37740000 35589000 75404000 53115000 0 81056000 57788000 77028000 17120 170 15585 143313;143314;143315;143316;143317;143318;143319;143320;143321;143322;143323 114145;114146;114147;114148;114149;114150;114151;114152;114153;114154;114155 114153 6 FSGVAGEAPSNPSVPVAVSSGPGRGDADSHASMK Unmodified 3224.5157 0.51565322 5260 Q9Y613 FHOD1 FH1/FH2 domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 69.361 63.356 4 0.00025435 78629 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 38.298 32.697 24080000 8599700 0 15480000 0 0 0 0 0 0 0 0 0 0 0 0 17121 5260 15586 143324;143325 114156;114157 114157 2 FSGVAGEAPSNPSVPVAVSSGPGRGDADSHASMK Oxidation (M) 3240.5106 0.51056785 5260 Q9Y613 FHOD1 FH1/FH2 domain-containing protein 1 yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 66.36 60.335 4 1.8842E-06 75097 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 43.579 40.994 35277000 8264200 0 27013000 0 0 0 0 0 0 0 0 0 0 0 0 17122 5260 15586 143326;143327 114158 114158 6657 1 FSGVDMNAAR Unmodified 1066.4866 0.48657834 2725 Q5GLZ8 HERC4 Probable E3 ubiquitin-protein ligase HERC4 yes yes 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 42.442 42.475 2 0.0056704 46378 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.016 46.245 34900000 0 0 0 3461400 1707000 6430300 0 4078000 0 0 0 0 0 6983700 12240000 17123 2725 15587 143328;143329;143330;143331;143332;143333 114159 114159 1 FSGVDMNAAR Oxidation (M) 1082.4815 0.48149296 2725 Q5GLZ8 HERC4 Probable E3 ubiquitin-protein ligase HERC4 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 23.409 23.724 2 0.024598 24470 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 40.882 25.501 27328000 0 0 0 0 0 4438300 2642600 1050900 0 3085300 3134600 3655300 2962800 2510400 3848500 17124 2725 15587 143334;143335;143336;143337;143338;143339;143340;143341;143342 114160 114160 1 FSGVNEQPPVVLAVK Unmodified 1582.8719 0.87189295 3601 Q8WYP5 AHCTF1 Protein ELYS yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 77.946 78.052 2 0.0014669 89328 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 51.286 21.519 51980000 0 0 0 0 3028200 5468100 3952900 4889200 2196400 5693400 5173400 5160600 4177800 5068100 7172400 17125 3601 15588 143343;143344;143345;143346;143347;143348;143349;143350;143351;143352;143353 114161;114162;114163;114164;114165 114163 5 FSGWYDADLSPAGHEEAK Unmodified 1978.8697 0.86972069 1077 P18669 PGAM1 Phosphoglycerate mutase 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 2 2 2 2 70.503 70.715 2;3 7.2413E-06 80512 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.918 70.369 374610000 0 0 0 0 3341800 0 5062800 10320000 0 0 36466000 58962000 0 31517000 228940000 17126 1077 15589 143354;143355;143356;143357;143358;143359;143360;143361;143362;143363;143364 114166;114167;114168;114169;114170;114171 114166 5 FSGYGQLCER Unmodified 1215.5343 0.53425682 4446 Q9H871 RMND5A Protein RMD5 homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 45.109 45.592 2 0.015016 50208 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 58.699 49.111 13687000 0 0 0 0 0 0 0 0 0 0 4363000 5607800 0 3715800 0 17127 4446 15590 143365;143366;143367;143368 114172;114173;114174;114175 114174 4 FSHADAQK Unmodified 902.42463 0.42463001 2456 Q14966 ZNF638 Zinc finger protein 638 yes yes 0 0 0 By MS/MS 2 0 1 1 6.2236 2.9832 2 0.038042 5021 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.491 38.562 16953000 0 16953000 0 0 0 0 0 0 0 0 0 0 0 0 0 17128 2456 15591 143369 114176 114176 1 FSHDADPEVSYNSIFAMGMVGSGTNNAR 2 Oxidation (M) 3005.292 0.29198422 2252 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 0 2 0 By MS/MS By MS/MS 10 0 2 1 1 76.401 76.552 3 1.3779E-14 88389 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 52.144 51.459 25624000 0 0 0 0 0 0 0 0 0 13080000 0 12545000 0 0 0 17129 2252 15592 143370;143371 114177;114178 114178 3666;3667 2 FSHEEIAMATVTALR Unmodified 1674.8399 0.83994089 771 P04075 ALDOA Fructose-bisphosphate aldolase A yes yes 0 0 0 By MS/MS 10 0 1 1 76.78 77.066 3 0.0023334 88425 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.294 38.157 21479000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21479000 17130 771 15593 143372 114179 114179 1 FSHEEIAMATVTALRR Oxidation (M) 1846.936 0.93596654 771 P04075 ALDOA Fructose-bisphosphate aldolase A yes yes 0 1 1 By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 3 3 3 64.139 64.47 3;4 4.8436E-05 73178 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.428 61.612 305380000 0 0 0 0 0 3192400 0 2594300 3188400 0 6720200 35258000 0 20416000 234010000 17131 771 15594 143373;143374;143375;143376;143377;143378;143379;143380;143381;143382;143383;143384;143385 114180;114181;114182 114182 922 1 FSHEEIAMATVTALRR Unmodified 1830.9411 0.94105192 771 P04075 ALDOA Fructose-bisphosphate aldolase A yes yes 0 0 1 By MS/MS 10 0 1 1 73.491 73.861 4 0.0063268 84489 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.889 32.319 40858000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40858000 17132 771 15594 143386 114183 114183 0 FSHLTSLPQQLPSQQLMSK Oxidation (M) 2185.1201 0.1201385 2961 Q6PKG0 LARP1 La-related protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 72.229 72.414 3 2.3055E-24 82768 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.45 91.806 123760000 0 0 0 0 0 10075000 11605000 0 10080000 22408000 15426000 20018000 14488000 0 19657000 17133 2961 15595 143387;143388;143389;143390;143391;143392;143393;143394 114184;114185;114186;114187;114188;114189;114190;114191;114192;114193 114189 4588 10 FSHQGVQLIDFSPCER Unmodified 1918.8996 0.89958103 1776 P55884 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 0 0 0 By matching By matching By matching By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 76.314 76.467 3 0.0046899 87738 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.996 33.092 40489000 0 0 0 0 0 2448100 0 0 0 3709200 4234800 7030300 0 3422900 19644000 17134 1776 15596 143395;143396;143397;143398;143399;143400 114194 114194 1 FSIAPSSLDPSNR Unmodified 1389.6888 0.6888432 1710 P53350 PLK1 Serine/threonine-protein kinase PLK1 yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 72.014 72.051 2 0.041144 82153 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 42.336 27.185 14709000 0 0 0 0 2050800 2115800 2366300 0 0 2616600 2724900 0 0 2834400 0 17135 1710 15597 143401;143402;143403;143404;143405;143406 114195 114195 1 FSIAPSSLDPSNRK Unmodified 1517.7838 0.78380622 1710 P53350 PLK1 Serine/threonine-protein kinase PLK1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.48 62.576 3 0.0012621 71561 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 46.964 26.011 57365000 0 0 0 2732200 1967200 5412000 3130400 6388100 2942100 4764800 5092400 6108400 5155700 4416500 9255000 17136 1710 15598 143407;143408;143409;143410;143411;143412;143413;143414;143415;143416;143417;143418 114196;114197;114198;114199;114200;114201 114196 6 FSIEDLK Unmodified 850.44363 0.44363412 4787 Q9P016 THYN1 Thymocyte nuclear protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 67.843 68.014 2 0.039725 77238 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.915 6.2006 45483000 0 0 0 0 2334700 0 4256700 4289600 2781400 3580000 5811400 8506700 0 4263600 9658500 17137 4787 15599 143419;143420;143421;143422;143423;143424;143425;143426;143427 114202;114203;114204 114202 3 FSIGDLQEEEK Unmodified 1293.6089 0.60886155 4618 Q9NS73 MBIP MAP3K12-binding inhibitory protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 68.82 68.166 2 0.0048809 77660 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.398 38.161 125850000 0 46354000 0 4392000 6218200 6206100 4012700 4794000 4137300 10045000 13075000 11392000 3634600 4671500 6915800 17138 4618 15600 143428;143429;143430;143431;143432;143433;143434;143435;143436;143437;143438;143439;143440;143441 114205;114206;114207;114208;114209;114210;114211;114212;114213;114214;114215 114207 10 FSLADGTIVTAQTK Unmodified 1450.7668 0.76675917 5292 Q9Y6Q9 NCOA3 Nuclear receptor coactivator 3 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 73.813 73.927 2 0.014123 85280 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 49.448 35.856 43327000 0 0 0 0 4028700 4410500 2962100 2788500 0 5069100 5669600 4552500 3623600 3551400 6671000 17139 5292 15601 143442;143443;143444;143445;143446;143447;143448;143449;143450;143451 114216 114216 1 FSLAEMHFQK Unmodified 1236.5961 0.59612879 1273 P30260 CDC27 Cell division cycle protein 27 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 72.249 71.689 3 0.0023183 81775 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.56 36.705 76948000 5964500 0 0 3558500 1338900 7639100 2270000 4824800 5190900 4668800 4595400 6268000 5108300 7362800 18158000 17140 1273 15602 143452;143453;143454;143455;143456;143457;143458;143459;143460;143461;143462;143463;143464 114217;114218;114219;114220;114221;114222;114223;114224 114219 8 FSLCSDNLEGISEGPSNR Unmodified 1980.8847 0.88471883 2463 Q14C86 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 76.289 76.277 2 1.3415E-29 88115 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 113.76 100.56 49550000 0 0 0 2347900 3195700 7294400 5476300 5127000 0 10968000 8595900 0 6544400 0 0 17141 2463 15603 143465;143466;143467;143468;143469;143470;143471;143472;143473;143474 114225;114226;114227;114228;114229;114230;114231;114232;114233;114234 114226 10 FSLDAVSLK Unmodified 978.5386 0.53859714 5282 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6 4 3 3 1 2 1 1 1 78.014 76.449 2 0.0032531 88148 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 90.657 47.656 166940000 0 106690000 21049000 0 0 0 12777000 15064000 11364000 0 0 0 0 0 0 17142 5282 15604 143475;143476;143477;143478;143479;143480 114235;114236;114237;114238;114239 114235 4 FSLDTLYVSTAK Unmodified 1343.6973 0.69728262 1636 P50748 KNTC1 Kinetochore-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS 9.36 2.01 1 10 1 1 1 1 1 1 1 1 1 1 1 82.205 82.037 2 0.017049 94961 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 50.284 36.077 27241000 0 2814300 0 0 0 2731600 1198300 2026200 1410700 3085400 2313500 1897200 1092700 3162400 5509200 17143 1636 15605 143481;143482;143483;143484;143485;143486;143487;143488;143489;143490;143491 114240;114241;114242 114240 3 FSLESQK Unmodified 837.42323 0.42323303 4077 Q99996 AKAP9 A-kinase anchor protein 9 yes yes 0 0 0 By MS/MS 2 0 1 1 35.891 31.043 2 0.043624 40672 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.146 20.9 26400000 0 26400000 0 0 0 0 0 0 0 0 0 0 0 0 0 17144 4077 15606 143492 114243 114243 1 FSLIDLAGNER Unmodified 1233.6354 0.63535107 116 O00139 KIF2A Kinesin-like protein KIF2A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 83.654 83.698 2 0.001274 96964 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 93.111 49.864 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17145 116 15607 143493;143494;143495;143496 114244;114245;114246;114247 114244 4 FSLPQEK Unmodified 847.44397 0.44396847 3548 Q8WUM0 NUP133 Nuclear pore complex protein Nup133 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 50.786 45.464 2 0.022746 58993 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.42 29.569 170080000 0 170080000 0 0 0 0 0 0 0 0 0 0 0 0 0 17146 3548 15608 143497;143498 114248 114248 1 FSLPVDLAVR Unmodified 1115.6339 0.63389451 3771 Q96C34 RUNDC1 RUN domain-containing protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 86.862 87.02 2 0.042395 100658 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.305 13.365 2350000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2350000 17147 3771 15609 143499 114249 114249 1 FSLQDPPNK Unmodified 1044.524 0.52400971 425 O60701 UGDH UDP-glucose 6-dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.8 3.12 3 1 1 1 2 1 1 47.523 43.21 2 0.006387 48508 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.213 49.319 673020000 21375000 622550000 4109000 0 0 0 0 0 0 0 0 0 0 0 24992000 17148 425 15610 143500;143501;143502;143503;143504 114250;114251;114252;114253;114254 114252 5 FSLSGGYWNSVSDTAK Unmodified 1717.7948 0.79476484 1672 P51812 RPS6KA3 Ribosomal protein S6 kinase alpha-3 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 81.852 77.902 2 0.00029966 99513 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 113.24 106.54 30595000 25382000 0 0 0 0 0 0 0 0 0 0 0 0 0 5212800 17149 1672 15611 143505;143506 114255;114256 114256 2 FSLSVPR Unmodified 804.44939 0.4493882 2132 Q07002 CDK18 Cyclin-dependent kinase 18 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.475 63.568 2 0.024035 72645 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 83.614 32.648 132750000 0 0 0 6657500 9185300 10470000 10240000 9303000 7620600 13886000 12700000 14098000 13030000 10561000 14999000 17150 2132 15612 143507;143508;143509;143510;143511;143512;143513;143514;143515;143516;143517;143518 114257;114258;114259;114260;114261;114262;114263;114264 114261 8 FSLVDLAGNER Unmodified 1219.6197 0.619701 4043 Q99661;Q8N4N8 KIF2C;KIF2B Kinesin-like protein KIF2C;Kinesin-like protein KIF2B yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.163 80.221 2 0.00062376 91883 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 79.148 58.278 262850000 0 0 0 10279000 14580000 23755000 16304000 21338000 18316000 27489000 24328000 23671000 20270000 20299000 42224000 17151 4043 15613 143519;143520;143521;143522;143523;143524;143525;143526;143527;143528;143529;143530 114265;114266;114267;114268;114269;114270;114271;114272;114273;114274;114275;114276 114272 12 FSLYFLAYEDK Unmodified 1394.6758 0.6758189 2106 Q04760 GLO1 Lactoylglutathione lyase yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 2 2 2 2 95.71 90.786 2 0.00024132 114462 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.31 91.331 43840000 35058000 8782000 0 0 0 0 0 0 0 0 0 0 0 0 0 17152 2106 15614 143531;143532;143533;143534 114277;114278 114278 2 FSMALCDQEK Oxidation (M) 1243.5213 0.52130887 1522 P47712 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 30.869 30.995 2 0.0053447 33529 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 60.828 48.781 32088000 0 0 0 0 3112300 4707700 3630100 0 4226700 0 3881900 0 7547000 4982200 0 17153 1522 15615 143535;143536;143537;143538;143539;143540;143541;143542;143543 114279;114280;114281;114282;114283;114284 114283 2416 6 FSMALCDQEK Unmodified 1227.5264 0.52639425 1522 P47712 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 53.532 53.679 2 0.0014976 59940 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 109.44 89.109 137270000 0 0 0 7897600 6709500 0 5823400 7235800 6872300 22644000 15727000 17457000 15133000 14966000 16802000 17154 1522 15615 143544;143545;143546;143547;143548;143549;143550;143551;143552;143553;143554 114285;114286;114287;114288;114289;114290;114291;114292;114293;114294;114295;114296 114293 12 FSMPGFK Unmodified 812.3891 0.38909613 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69.278 68.7 2 0.033071 88187 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.086 86.086 3587000000 444610 303410000 0 172920000 147450000 193700000 191570000 303580000 209680000 236830000 276790000 360970000 348570000 336950000 504110000 17155 2172 15616 143555;143556;143557;143558;143559;143560;143561;143562;143563;143564;143565;143566;143567;143568 114297;114298;114299;114300;114301;114302;114303;114304;114305;114306;114307 114299 11 FSMPGFK Oxidation (M) 828.38401 0.38401075 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.67 1.6 1 23 1 2 2 2 2 2 2 2 2 2 2 1 2 37.752 37.638 2 0.022046 41017 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 71.949 56.728 2421900000 109890000 0 0 134020000 137480000 145080000 219540000 229990000 193670000 182090000 166130000 295450000 266420000 101680000 240500000 17156 2172 15616 143569;143570;143571;143572;143573;143574;143575;143576;143577;143578;143579;143580;143581;143582;143583;143584;143585;143586;143587;143588;143589;143590;143591;143592 114308;114309;114310;114311;114312;114313;114314;114315;114316;114317;114318;114319;114320;114321;114322;114323;114324 114319 17 FSMPSLK Unmodified 808.41531 0.41531088 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.009 66.093 2 0.025177 74649 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.297 65.66 422760000 0 0 0 24197000 22562000 24566000 24633000 40022000 24171000 28555000 41856000 49453000 40000000 40467000 62279000 17157 2172 15617 143593;143594;143595;143596;143597;143598;143599;143600;143601;143602;143603;143604 114325;114326;114327;114328;114329;114330;114331;114332 114328 8 FSMPSLK Oxidation (M) 824.41023 0.4102255 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 2 2 2 2 1 2 2 2 1 1 37.368 37.517 2 0.032201 42997 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 64.757 34.916 285520000 0 0 0 19226000 17427000 20086000 24464000 27737000 21320000 10593000 26264000 41171000 39915000 13693000 23622000 17158 2172 15617 143605;143606;143607;143608;143609;143610;143611;143612;143613;143614;143615;143616;143617;143618;143619;143620;143621;143622;143623;143624;143625 114333;114334;114335;114336 114336 4 FSNAEPEPR Unmodified 1045.4829 0.48287317 3634 Q92599 SEPT8 Septin-8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 20.058 20.574 2 0.001913 20894 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 140.5 116.98 15429000 0 0 0 0 0 0 0 0 0 0 15429000 0 0 0 0 17159 3634 15618 143626;143627;143628;143629 114337;114338;114339;114340 114338 4 FSNDQTIELEK Unmodified 1322.6354 0.63541065 2087 Q03014 HHEX Hematopoietically-expressed homeobox protein HHEX yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 48.501 48.682 2 0.00027654 54669 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 90.827 62.618 103720000 0 0 0 0 9079300 9482000 8527700 9662500 6707500 8286500 18237000 14533000 12040000 7162300 0 17160 2087 15619 143630;143631;143632;143633;143634;143635;143636;143637;143638;143639 114341;114342;114343;114344;114345;114346;114347;114348;114349;114350;114351 114342 11 FSNISAAK Unmodified 836.43922 0.43921744 1642 P50991 CCT4 T-complex protein 1 subunit delta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.505 21.71 2 0.0047287 22119 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 113.5 56.989 3799700000 0 0 0 174040000 134310000 348930000 243710000 281970000 169580000 381490000 423270000 481460000 311830000 358530000 490580000 17161 1642 15620 143640;143641;143642;143643;143644;143645;143646;143647;143648;143649;143650;143651 114352;114353;114354;114355;114356;114357;114358;114359;114360;114361;114362;114363;114364;114365 114362 14 FSNQETCVEIGESVR Unmodified 1753.7941 0.79411291 1818 P60891 PRPS1 Ribose-phosphate pyrophosphokinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 58.056 58.37 2 4.9849E-19 66494 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 109.24 93.697 20161000 0 0 0 0 0 0 0 0 0 5451300 0 0 0 4215700 10494000 17162 1818 15621 143652;143653;143654 114366;114367;114368 114366 3 FSNQETSVEIGESVR Unmodified 1680.7955 0.79549312 957 P11908 PRPS2 Ribose-phosphate pyrophosphokinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 55.895 56.189 2 0.00094549 63075 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.185 68.96 41274000 0 0 0 0 0 0 4903100 0 0 7461900 6809500 0 0 6680500 15419000 17163 957 15622 143655;143656;143657;143658;143659 114369;114370;114371;114372 114371 4 FSNSIPQSQTGNSETATPTNVDLPQVIPK Unmodified 3069.5255 0.52547285 1497 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes yes 0 0 0 By MS/MS 2 0 1 1 86.019 81.245 3 9.5666E-09 101019 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.104 48.138 24264000 0 24264000 0 0 0 0 0 0 0 0 0 0 0 0 0 17164 1497 15623 143660 114373 114373 1 FSNSSSSNEFSK Unmodified 1319.563 0.56297399 95 CON__Q5D862;Q5D862 FLG2 Filaggrin-2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 22.645 22.851 2 2.5705E-14 23675 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 177.57 162.31 + 2653800000 0 0 0 611310000 86156000 176350000 106160000 329170000 85622000 177770000 195850000 402240000 255150000 130430000 97635000 17165 95 15624 143661;143662;143663;143664;143665;143666;143667;143668;143669;143670;143671;143672;143673 114374;114375;114376;114377;114378;114379;114380;114381;114382;114383;114384;114385;114386;114387;114388 114375 15 FSNTLELK Unmodified 950.5073 0.50729701 2215 Q12965 MYO1E Unconventional myosin-Ie yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.08 3.33 2 1 9 1 2 1 1 1 1 1 1 1 1 1 52.389 50.404 2 0.0060247 57814 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 104.37 54.326 1206400000 31354000 1047400000 0 0 23649000 0 0 13011000 0 18261000 0 0 19349000 20472000 32840000 17166 2215 15625 143674;143675;143676;143677;143678;143679;143680;143681;143682;143683;143684;143685 114389;114390;114391;114392;114393;114394;114395;114396;114397;114398;114399;114400;114401;114402;114403;114404;114405;114406 114405 18 FSPAGPILSIR Unmodified 1156.6604 0.66044361 958 P11940;Q9H361;Q4VXU2 PABPC1;PABPC3;PABPC1L Polyadenylate-binding protein 1;Polyadenylate-binding protein 3;Polyadenylate-binding protein 1-like no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.373 79.434 2 0.0013382 91896 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 76.228 76.228 1408400000 0 0 0 56578000 74811000 90170000 74458000 98574000 79103000 169910000 140700000 205850000 100070000 122360000 195860000 17167 958 15626 143686;143687;143688;143689;143690;143691;143692;143693;143694;143695;143696;143697 114407;114408;114409;114410;114411;114412;114413;114414;114415 114411 8 FSPAGPVLSIR Unmodified 1142.6448 0.64479354 2268 Q13310 PABPC4 Polyadenylate-binding protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.829 74.893 2 0.002981 86212 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.532 34.103 511490000 0 0 0 22425000 30208000 41866000 31479000 32273000 32319000 47735000 45676000 68934000 40499000 40809000 77267000 17168 2268 15627 143698;143699;143700;143701;143702;143703;143704;143705;143706;143707;143708;143709 114416;114417;114418;114419;114420;114421;114422;114423;114424;114425;114426;114427 114425 11 FSPDGELYASGSEDGTLR Unmodified 1899.8487 0.8486509 5167 Q9Y3F4 STRAP Serine-threonine kinase receptor-associated protein yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 67.194 67.268 2 0.00056119 77037 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 71.879 63.469 99719000 0 0 0 2438300 2107100 5533100 2207400 3981300 0 6877000 12047000 14865000 3540100 9640400 36481000 17169 5167 15628 143710;143711;143712;143713;143714;143715;143716;143717;143718;143719;143720 114428;114429;114430;114431;114432;114433;114434;114435 114432 8 FSPDSQYIDNR Unmodified 1340.5997 0.59969384 3521 Q8TEW0 PARD3 Partitioning defective 3 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 46.369 46.616 2 4.3033E-06 51405 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 127.4 98.248 20829000 0 0 0 0 0 0 0 0 0 9016700 0 0 8379600 3432500 0 17170 3521 15629 143721;143722;143723;143724;143725;143726 114436;114437;114438;114439;114440;114441;114442 114438 7 FSPFPVQDRPESSLVFK Unmodified 1979.0153 0.015262719 5066 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.039 82.1 3 0.00066245 94659 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.872 27.958 149720000 0 0 0 1431700 2368300 9491900 3266500 10918000 12389000 12493000 12003000 15172000 5731100 11585000 52871000 17171 5066 15630 143727;143728;143729;143730;143731;143732;143733;143734;143735;143736;143737;143738 114443;114444;114445;114446;114447;114448;114449;114450;114451 114445 9 FSPGAPGGSGSQPNQK Unmodified 1514.7114 0.71136956 2595 Q15942 ZYX Zyxin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 25.743 24.823 2 3.0113E-08 30731 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 142.89 121.43 1087200000 40647000 649080000 2464700 17671000 15681000 16750000 24668000 19099000 16923000 32733000 31047000 53313000 25850000 41848000 99431000 17172 2595 15631 143739;143740;143741;143742;143743;143744;143745;143746;143747;143748;143749;143750;143751;143752;143753;143754 114452;114453;114454;114455;114456;114457;114458;114459;114460;114461;114462;114463;114464;114465 114455 14 FSPGFFPGTGDVSDVGLGK Unmodified 1882.9101 0.91012895 4239 Q9BY41 HDAC8 Histone deacetylase 8 yes yes 0 0 0 By MS/MS 2 0 1 1 91.121 86.224 2 0.00026269 107059 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.413 66.209 26363000 0 26363000 0 0 0 0 0 0 0 0 0 0 0 0 0 17173 4239 15632 143755 114466 114466 1 FSPILIR Unmodified 844.51707 0.51707383 4805 Q9P253 VPS18 Vacuolar protein sorting-associated protein 18 homolog yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 72.018 72.147 2 0.023371 82165 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.734 19.345 43742000 0 0 0 0 2540000 4773200 2164800 3647800 2648500 3318700 3798000 4733400 4410400 3622200 8084600 17174 4805 15633 143756;143757;143758;143759;143760;143761;143762;143763;143764;143765;143766 114467;114468;114469;114470 114467 4 FSPLMTAAVLGTR Oxidation (M) 1378.7279 0.72787125 2940 Q6P996 PDXDC1 Pyridoxal-dependent decarboxylase domain-containing protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 80.467 80.523 2 1.0081E-07 93629 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 97.734 85.498 220190000 0 0 0 8731000 10278000 21961000 17286000 14388000 12227000 28094000 19344000 15110000 19423000 17284000 36065000 17175 2940 15634 143767;143768;143769;143770;143771;143772;143773;143774;143775;143776;143777;143778;143779;143780;143781;143782;143783;143784;143785;143786;143787;143788;143789;143790 114471;114472;114473;114474;114475;114476;114477;114478;114479;114480;114481;114482;114483;114484;114485;114486;114487;114488;114489 114486 4574 18 FSPLMTAAVLGTR Unmodified 1362.733 0.73295662 2940 Q6P996 PDXDC1 Pyridoxal-dependent decarboxylase domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 85.775 85.824 2 0.0043029 99615 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 56.225 43.413 27257000 0 0 0 971210 0 4828700 0 5236800 2939500 5885700 0 7395000 0 0 0 17176 2940 15634 143791;143792;143793;143794;143795;143796 114490;114491;114492;114493 114493 4 FSPNGEWLASSSADK Unmodified 1594.7264 0.72635092 1865 P61964 WDR5 WD repeat-containing protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 67.375 66.509 2 2.2344E-15 80663 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 115.14 108.25 320560000 0 151460000 3367400 5478800 8319200 8162200 10427000 13679000 8464700 14470000 16001000 21194000 9313100 14790000 35433000 17177 1865 15635 143797;143798;143799;143800;143801;143802;143803;143804;143805;143806;143807;143808;143809;143810;143811 114494;114495;114496;114497;114498;114499;114500;114501;114502;114503;114504;114505;114506;114507;114508 114500 15 FSPNSSNPIIVSCGWDK Unmodified 1906.8883 0.88834765 1950 P63244 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 0 0 0 By MS/MS 2 0 1 1 82.272 77.567 2 0.006485 96543 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 63.894 42.336 49201000 0 49201000 0 0 0 0 0 0 0 0 0 0 0 0 0 17178 1950 15636 143812 114509;114510 114510 2 FSPPILQLDEVDFYYDPK Unmodified 2185.0619 0.06193814 4653 Q9NUQ8 ABCF3 ATP-binding cassette sub-family F member 3 yes yes 0 0 0 By MS/MS 2 0 1 1 98.824 90.694 2 4.0888E-05 116963 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 111.12 100.01 17084000 17084000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17179 4653 15637 143813 114511 114511 1 FSPSQQEK Unmodified 949.45051 0.45051041 2463 Q14C86 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.267 11.406 2 0.0055452 10566 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 116.9 91.077 147960000 0 0 0 12105000 7666400 15124000 13613000 12323000 0 11250000 8222100 17544000 14545000 14333000 21232000 17180 2463 15638 143814;143815;143816;143817;143818;143819;143820;143821;143822;143823;143824 114512;114513;114514;114515;114516;114517;114518;114519 114513 7 FSPSQVPIQTR Unmodified 1258.667 0.66698555 2164 Q08AD1 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 56.804 56.939 2 0.0029676 64361 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 72.325 56.663 73506000 0 0 0 6357600 0 10635000 0 0 5540500 11768000 10996000 13421000 7275000 7513400 0 17181 2164 15639 143825;143826;143827;143828;143829;143830;143831;143832 114520;114521;114522;114523;114524;114525 114524 6 FSPSQVPVQTR Unmodified 1244.6513 0.65133548 4801 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.203 49.362 2 0.00032278 55191 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 95.642 70.867 287210000 0 0 0 16568000 17906000 20396000 25147000 18136000 22811000 24477000 24256000 40255000 22794000 26198000 28264000 17182 4801 15640 143833;143834;143835;143836;143837;143838;143839;143840;143841;143842;143843;143844 114526;114527;114528;114529;114530;114531;114532;114533;114534;114535;114536 114535 11 FSPTDFLAK Unmodified 1024.5229 0.52294707 1464 P42704 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80.412 79.272 2 0.0084462 91967 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 69.598 54.159 413620000 20889000 265290000 16585000 10160000 7622100 14170000 7857200 8159500 6891000 12628000 11381000 14329000 0 0 17656000 17183 1464 15641 143845;143846;143847;143848;143849;143850;143851;143852;143853;143854;143855;143856;143857;143858 114537;114538;114539;114540;114541;114542;114543;114544;114545;114546;114547;114548;114549 114538 13 FSPTMGR Unmodified 794.37451 0.3745087 1974 P78344 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.147 29.338 2 0.0174 31630 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 114.02 91.401 1200300000 0 0 0 59354000 60284000 94268000 68220000 79667000 79089000 98388000 112450000 153830000 101380000 116270000 177070000 17184 1974 15642 143859;143860;143861;143862;143863;143864;143865;143866;143867;143868;143869;143870 114550;114551;114552;114553;114554;114555;114556;114557;114558;114559;114560 114551 8 FSPTMGR Oxidation (M) 810.36942 0.36942332 1974 P78344 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 15.931 16.13 2 0.018543 15713 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 76.847 59.285 655990000 0 0 0 0 35910000 53562000 40568000 42624000 32921000 43059000 66652000 93999000 87673000 73868000 85150000 17185 1974 15642 143871;143872;143873;143874;143875;143876;143877;143878;143879;143880;143881 114561;114562;114563;114564;114565;114566;114567;114568 114566 3168 8 FSPVATASYR Unmodified 1097.5506 0.55055881 260 O15160 POLR1C DNA-directed RNA polymerases I and III subunit RPAC1 yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 46.871 46.749 2 0.007439 53433 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 62.463 48.306 42110000 0 0 0 10129000 0 17375000 0 14605000 0 0 0 0 0 0 0 17186 260 15643 143882;143883;143884 114569;114570 114570 1 FSPVTPK Unmodified 774.42759 0.42759012 2595 Q15942 ZYX Zyxin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 34.318 29.597 2 0.022033 37205 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 108.24 81.897 1916200000 337930000 1530500000 47820000 0 0 0 0 0 0 0 0 0 0 0 0 17187 2595 15644 143885;143886;143887;143888 114571;114572 114571 2 FSQELLSNGELNHLPLK Unmodified 1938.0211 0.021076378 1053 P17480 UBTF Nucleolar transcription factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 82.045 80.98 3 1.7158E-18 93874 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 99.747 87.032 333400000 86603000 79094000 0 0 0 15186000 0 10598000 13310000 24383000 15365000 26253000 5257300 8464800 48890000 17188 1053 15645 143889;143890;143891;143892;143893;143894;143895;143896;143897;143898;143899 114573;114574;114575;114576;114577;114578;114579;114580;114581;114582;114583;114584;114585;114586;114587 114587 15 FSQEVQITEAR Unmodified 1306.6517 0.65172941 1301 P31350 RRM2 Ribonucleoside-diphosphate reductase subunit M2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.884 48.046 2 5.9261E-11 54034 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 177.06 140.67 211520000 0 0 0 5585300 12496000 12111000 12938000 9869500 11763000 19261000 23718000 19819000 21382000 20681000 41899000 17189 1301 15646 143900;143901;143902;143903;143904;143905;143906;143907;143908;143909;143910;143911 114588;114589;114590;114591;114592;114593;114594;114595;114596;114597;114598;114599;114600 114592 11 FSQFLETEYK Unmodified 1290.6132 0.61321864 828 P06737 PYGL Glycogen phosphorylase, liver form yes yes 0 0 0 By MS/MS 2 0 1 1 72.906 67.361 2 0.0042 85062 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.761 69.255 104510000 0 104510000 0 0 0 0 0 0 0 0 0 0 0 0 0 17190 828 15647 143912 114601 114601 1 FSQGPTPAAAVPEGTAAEGAPR Unmodified 2081.0178 0.017781914 3848 Q96G46 DUS3L tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like yes yes 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 2 2 58.488 58.763 2;3 6.1187E-05 66266 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.092 59.813 38269000 0 0 0 0 0 1966500 3549200 0 0 2490900 4824700 0 2782500 8218100 14437000 17191 3848 15648 143913;143914;143915;143916;143917;143918;143919;143920;143921 114602;114603;114604;114605 114602 4 FSQGSHLAAHR Unmodified 1209.6003 0.60030297 4208 Q9BWE0 REPIN1 Replication initiator 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 12.346 12.594 3 0.0040512 10582 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.706 35.898 40860000 0 0 0 0 0 0 0 0 0 13940000 0 0 9075500 6135700 11708000 17192 4208 15649 143922;143923;143924;143925 114606;114607;114608 114607 1 FSQGSHLAAHRR Unmodified 1365.7014 0.70141399 4208 Q9BWE0 REPIN1 Replication initiator 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 9.0661 9.3268 3 0.00016805 7430 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.781 59.524 40018000 0 0 0 0 0 0 0 0 0 0 0 15708000 8090200 3695200 12524000 17193 4208 15650 143926;143927;143928;143929 114609;114610;114611;114612;114613 114613 5 FSQIVNLK Unmodified 947.54402 0.54401687 4818 Q9P2I0 CPSF2 Cleavage and polyadenylation specificity factor subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 59.444 57.762 2 0.010495 66281 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 79.469 24.027 996730000 91074000 832070000 0 0 12514000 10162000 12400000 0 0 14645000 12918000 10949000 0 0 0 17194 4818 15651 143930;143931;143932;143933;143934;143935;143936;143937 114614;114615;114616;114617 114617 2 FSQLPFK Unmodified 865.46979 0.46978929 454 O75113 N4BP1 NEDD4-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 69.091 63.131 2 0.036783 80950 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.287 53.102 72631000 25396000 15426000 31808000 0 0 0 0 0 0 0 0 0 0 0 0 17195 454 15652 143938;143939;143940 114618 114618 1 FSQLYPER Unmodified 1038.5134 0.51344502 1539 P48449 LSS Lanosterol synthase yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 44.954 45.318 2 0.0067838 50625 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 97.093 47.069 52540000 0 0 0 0 0 5443500 0 4294000 3928600 0 9790100 7978400 4412800 8717300 7975400 17196 1539 15653 143941;143942;143943;143944;143945;143946;143947;143948 114619;114620;114621 114619 3 FSQQYSTIVK Unmodified 1199.6186 0.61863837 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 48.916 48.221 2 0.0022879 61957 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.6 82.644 76457000 0 48591000 0 0 0 4222700 0 0 0 4614300 6221500 0 0 4803000 8004300 17197 5049 15654 143949;143950;143951;143952;143953;143954 114622;114623;114624;114625;114626 114623 5 FSQSTGDIDK Unmodified 1096.5037 0.50366819 1127 P21675 TAF1 Transcription initiation factor TFIID subunit 1 yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 25.256 20.838 2 0.0067968 27374 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.95 46.457 12837000 147950 12689000 0 0 0 0 0 0 0 0 0 0 0 0 0 17198 1127 15655 143955;143956 114627 114627 1 FSREEFPTLQAAGDQDK Unmodified 1937.9119 0.91191986 1546 P48634 PRRC2A Protein PRRC2A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 62.421 62.507 3 1.0409E-07 71359 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 76.586 64.944 201950000 0 0 0 9247900 9026800 18454000 10806000 15089000 15804000 21331000 20931000 27584000 17967000 0 35704000 17199 1546 15656 143957;143958;143959;143960;143961;143962;143963;143964;143965;143966;143967 114628;114629;114630;114631;114632;114633;114634;114635;114636;114637;114638 114629 6 FSRPESEQAR Unmodified 1205.5789 0.57889882 4683 Q9NVU0 POLR3E DNA-directed RNA polymerase III subunit RPC5 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 12.96 13.101 3 0.0023771 12152 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.143 63.566 51201000 0 0 0 0 5224200 6810300 6847800 6559100 6503800 0 9076700 10179000 0 0 0 17200 4683 15657 143968;143969;143970;143971;143972;143973;143974 114639;114640 114640 2 FSSASGASAR Unmodified 939.44101 0.44100836 4577 Q9NQW6 ANLN Actin-binding protein anillin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 9.1015 9.2291 2 0.0018498 7611 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 96.331 68.123 60017000 0 0 0 5753400 0 6338300 5930100 3935900 4088500 5191400 0 13161000 7986500 0 7631500 17201 4577 15658 143975;143976;143977;143978;143979;143980;143981;143982;143983;143984 114641;114642;114643;114644;114645;114646;114647;114648;114649;114650 114649 10 FSSCGGGGGSFGAGGGFGSR Unmodified 1764.7274 0.72743033 780 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 74 24 6 3 6 4 4 9 3 4 3 4 4 58.163 58.088 2 5.8962E-123 61246 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 237.46 236.35 + 1949300000 0 0 0 483050000 123840000 104040000 84058000 126420000 76035000 217440000 143810000 167580000 114840000 149550000 158630000 17202 780 15659 143985;143986;143987;143988;143989;143990;143991;143992;143993;143994;143995;143996;143997;143998;143999;144000;144001;144002;144003;144004;144005;144006;144007;144008;144009;144010;144011;144012;144013;144014;144015;144016;144017;144018;144019;144020;144021;144022;144023;144024;144025;144026;144027;144028;144029;144030;144031;144032;144033;144034;144035;144036;144037;144038;144039;144040;144041;144042;144043;144044;144045;144046;144047;144048;144049;144050;144051;144052;144053;144054;144055;144056;144057;144058 114651;114652;114653;114654;114655;114656;114657;114658;114659;114660;114661;114662;114663;114664;114665;114666;114667;114668;114669;114670;114671;114672;114673;114674;114675;114676;114677;114678;114679;114680;114681;114682;114683;114684;114685;114686;114687;114688;114689;114690;114691;114692;114693;114694;114695;114696;114697;114698;114699;114700;114701;114702;114703;114704;114705;114706;114707;114708;114709;114710;114711;114712;114713;114714;114715;114716;114717;114718;114719;114720;114721;114722;114723;114724;114725;114726;114727;114728;114729;114730;114731;114732;114733;114734;114735;114736;114737;114738;114739;114740;114741;114742;114743;114744 114708 90 FSSINSDK Unmodified 896.42396 0.42396131 5023 Q9UMZ2 SYNRG Synergin gamma yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 16.022 15.489 2 0.011957 14317 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 75.738 48.776 52922000 0 33075000 0 2466000 0 3482800 3503200 0 0 3914300 0 0 0 6480600 0 17203 5023 15660 144059;144060;144061;144062;144063;144064 114745;114746;114747;114748 114748 3 FSSIQMQLK Unmodified 1080.5638 0.56376603 1412;1414 P40426;P40424 PBX3;PBX1 Pre-B-cell leukemia transcription factor 3;Pre-B-cell leukemia transcription factor 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 62.474 61.812 2 0.0056995 82643 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.59 35.879 47706000 14217000 0 0 1802000 2205100 0 2357400 2383600 2079200 4241400 3114400 5262300 3670200 0 6373700 17204 1414;1412 15661 144065;144066;144067;144068;144069;144070;144071;144072;144073;144074;144075 114749;114750;114751 114750 2 FSSITAHPER Unmodified 1143.5673 0.5672715 3538 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 17 2 1 2 2 1 1 2 1 1 2 2 26.024 26.204 2;3 0.010434 28224 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 56.013 29.908 227350000 0 0 0 17077000 16398000 25882000 19681000 13992000 11269000 29791000 20424000 20639000 24189000 0 28004000 17205 3538 15662 144076;144077;144078;144079;144080;144081;144082;144083;144084;144085;144086;144087;144088;144089;144090;144091;144092 114752;114753;114754;114755;114756 114752 4 FSSLPLGR Unmodified 875.4865 0.48650199 1411 P40261 NNMT Nicotinamide N-methyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 56.999 56.92 2 0.006821 64706 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 95.352 22.314 272140000 0 0 0 23453000 21638000 83775000 38098000 23541000 20203000 61435000 0 0 0 0 0 17206 1411 15663 144093;144094;144095;144096;144097;144098;144099;144100;144101 114757;114758;114759;114760;114761;114762;114763;114764;114765;114766 114763 9 FSSLPLGREAVEAAVK Unmodified 1672.9148 0.91482039 1411 P40261 NNMT Nicotinamide N-methyltransferase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 3.23 5 2 2 4 2 1 1 1 81.504 77.2 2;3 2.7398E-18 96855 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 128.68 105.45 1011100000 828610000 166170000 8780900 0 0 4314600 0 0 0 3194800 0 0 0 0 0 17207 1411 15664 144102;144103;144104;144105;144106;144107;144108;144109;144110 114767;114768;114769;114770;114771;114772;114773;114774 114773 7 FSSNQPPAAGSSR Unmodified 1304.6109 0.61092723 2646 Q27J81 INF2 Inverted formin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.988 19.184 2 1.6105E-13 18284 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 141.08 134.49 285190000 0 0 0 18081000 17662000 20564000 18344000 19392000 14889000 26604000 28798000 35276000 23787000 19560000 42229000 17208 2646 15665 144111;144112;144113;144114;144115;144116;144117;144118;144119;144120;144121;144122 114775;114776;114777;114778;114779;114780;114781;114782;114783;114784;114785 114778 11 FSSNQPPAAGSSRQDAK Unmodified 1746.8285 0.82852458 2646 Q27J81 INF2 Inverted formin-2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 19.419 15.786 3 0.0043053 20869 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 46.121 43.57 62110000 34419000 14536000 13155000 0 0 0 0 0 0 0 0 0 0 0 0 17209 2646 15666 144123;144124;144125 114786;114787;114788;114789 114787 3 FSSPTEELDYR Unmodified 1342.6041 0.60411052 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 59.799 59.989 2 0.00073559 67698 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.655 56.569 42828000 0 0 0 0 3098000 5151600 0 0 0 5957200 4290100 7427300 4550200 4326400 8026900 17210 645 15667 144126;144127;144128;144129;144130;144131;144132;144133 114790;114791;114792;114793;114794;114795;114796 114792 7 FSSQELILR Unmodified 1091.5975 0.597509 2150 Q08188 TGM3 Protein-glutamine gamma-glutamyltransferase E;Protein-glutamine gamma-glutamyltransferase E 50 kDa catalytic chain;Protein-glutamine gamma-glutamyltransferase E 27 kDa non-catalytic chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 68.069 67.743 2 0.011558 78744 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 101.6 84.215 170510000 0 0 0 84997000 20861000 0 0 64650000 0 0 0 0 0 0 0 17211 2150 15668 144134;144135;144136 114797 114797 0 FSSQELILRR Unmodified 1247.6986 0.69862003 2150 Q08188 TGM3 Protein-glutamine gamma-glutamyltransferase E;Protein-glutamine gamma-glutamyltransferase E 50 kDa catalytic chain;Protein-glutamine gamma-glutamyltransferase E 27 kDa non-catalytic chain yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 56.538 56.563 3 0.0042776 64215 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 52.79 24.613 86614000 0 0 0 19239000 4070800 6361700 0 22111000 0 10153000 0 15621000 4673300 4384000 0 17212 2150 15669 144137;144138;144139;144140;144141;144142;144143;144144 114798;114799 114798 2 FSSQQAATK Unmodified 966.47706 0.47705951 505 O75475 PSIP1 PC4 and SFRS1-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8.774 8.1894 2 0.00045211 11197 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 124.98 90.091 856630000 75203000 598270000 3518300 16516000 12097000 12718000 15098000 11637000 17369000 13815000 0 24692000 17051000 11186000 27453000 17213 505 15670 144145;144146;144147;144148;144149;144150;144151;144152;144153;144154;144155;144156;144157;144158 114800;114801;114802;114803;114804;114805;114806;114807;114808;114809;114810;114811;114812;114813 114808 14 FSSSGGGGGGGR Unmodified 981.42642 0.42642093 1354 P35527 KRT9 Keratin, type I cytoskeletal 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 5 1 1 1 1 1 1 1 1 1 2 5.4951 5.5591 2 7.2435E-12 3141 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 136.57 84.879 + 623340000 0 0 0 40770000 43101000 68006000 40379000 322550000 30384000 23200000 12944000 15337000 19812000 6856200 0 17214 1354 15671 144159;144160;144161;144162;144163;144164;144165;144166;144167;144168;144169;144170;144171;144172;144173;144174 114814;114815;114816;114817;114818;114819;114820;114821;114822;114823;114824;114825;114826;114827;114828;114829 114829 7 FSSSGGGGGGGRFSSSSGYGGGSSR Unmodified 2197.9373 0.93729976 1354 P35527 KRT9 Keratin, type I cytoskeletal 9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 2 1 1 3 1 1 1 1 2 1 1 28.5 28.663 3 1.252E-96 30154 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 150.09 147.08 + 723590000 0 0 0 49840000 20672000 37725000 40080000 167850000 36113000 53324000 82297000 86666000 86532000 25731000 36756000 17215 1354 15672 144175;144176;144177;144178;144179;144180;144181;144182;144183;144184;144185;144186;144187;144188;144189;144190 114830;114831;114832;114833;114834;114835;114836;114837;114838;114839;114840;114841;114842;114843;114844;114845 114843 15 FSSSIENSDSPVR Unmodified 1423.6579 0.657937 659 O95425 SVIL Supervillin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 43.451 43.391 2 1.1108E-08 48620 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 110.39 87.068 11353000 0 0 0 0 3308600 0 3918200 0 0 0 0 0 0 4125900 0 17216 659 15673 144191;144192;144193;144194 114846;114847;114848;114849;114850 114847 5 FSSSSGYGGGSSR Unmodified 1234.5214 0.52144352 1354 P35527;CON__P35527 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 56 5 5 4 5 6 4 6 4 5 6 3 3 15.893 16.047 1;2 4.5309E-90 14293 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 201.84 196.54 + 30460000000 0 0 0 3881300000 29605000 19557000 30727000 157710000 13364000 5661000000 4718100000 5206400000 5274600000 2906100000 2562100000 17217 1354 15674 144195;144196;144197;144198;144199;144200;144201;144202;144203;144204;144205;144206;144207;144208;144209;144210;144211;144212;144213;144214;144215;144216;144217;144218;144219;144220;144221;144222;144223;144224;144225;144226;144227;144228;144229;144230;144231;144232;144233;144234;144235;144236;144237;144238;144239;144240;144241;144242;144243;144244;144245;144246;144247;144248;144249;144250 114851;114852;114853;114854;114855;114856;114857;114858;114859;114860;114861;114862;114863;114864;114865;114866;114867;114868;114869;114870;114871;114872;114873;114874;114875;114876;114877;114878;114879;114880;114881;114882;114883;114884;114885;114886;114887;114888;114889;114890;114891;114892;114893;114894;114895;114896;114897 114877 42 FSSSSTSSSPSSLPR Unmodified 1512.7056 0.70561548 4713 Q9NX09 DDIT4 DNA damage-inducible transcript 4 protein yes yes 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.714 36.896 2 0.00012443 40407 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 87.363 75.497 45225000 0 0 0 1987600 2212100 5001800 3196200 2725400 2457500 3002900 4597000 5776600 5094600 2902300 6270900 17218 4713 15675 144251;144252;144253;144254;144255;144256;144257;144258;144259;144260;144261;144262 114898 114898 1 FSSSTEQSSASR Unmodified 1272.5582 0.55822296 198;3700 O14641;Q92997 DVL2;DVL3 Segment polarity protein dishevelled homolog DVL-2;Segment polarity protein dishevelled homolog DVL-3 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 10.217 10.354 2 5.943E-08 7164 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 119.53 95.374 129170000 0 0 0 6903200 6629900 10305000 10859000 6309500 5691300 11404000 12265000 12289000 11615000 11826000 23074000 17219 198;3700 15676 144263;144264;144265;144266;144267;144268;144269;144270;144271;144272;144273;144274 114899;114900;114901;114902;114903;114904;114905;114906;114907;114908;114909 114904 11 FSSTSADK Unmodified 841.38176 0.38176214 204 O14727 APAF1 Apoptotic protease-activating factor 1 yes yes 0 0 0 By MS/MS 2 0 1 1 7.0884 3.8454 2 0.023391 6039 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.452 67.516 37824000 0 37824000 0 0 0 0 0 0 0 0 0 0 0 0 0 17220 204 15677 144275 114910 114910 1 FSSVSSPQPR Unmodified 1090.5407 0.5407224 4802 Q9P206 KIAA1522 Uncharacterized protein KIAA1522 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.239 27.437 2 5.1465E-10 28991 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 157.68 109.12 227520000 0 0 0 13320000 19081000 16740000 20528000 16427000 18169000 21315000 24627000 23213000 18247000 16613000 19240000 17221 4802 15678 144276;144277;144278;144279;144280;144281;144282;144283;144284;144285;144286;144287 114911;114912;114913;114914;114915;114916;114917 114916 6 FSSVTVSTIDEEEEEIEAREVADSYAQNAK Unmodified 3345.5372 0.53721933 4409 Q9H5V9 CXorf56 UPF0428 protein CXorf56 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 88.644 83.362 3 0.00020898 106097 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 37.424 35.259 34227000 29782000 0 4444900 0 0 0 0 0 0 0 0 0 0 0 0 17222 4409 15679 144288;144289 114918;114919 114918 2 FSSWEDFEEEHGK Unmodified 1625.6634 0.66341631 199 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 69.211 63.251 3 0.024066 80927 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 35.054 30.621 38169000 9600300 26024000 2545100 0 0 0 0 0 0 0 0 0 0 0 0 17223 199 15680 144290;144291;144292 114920;114921 114920 2 FSSYSQMENWSR Oxidation (M) 1536.6303 0.63034205 2346 Q13835 PKP1 Plakophilin-1 yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 45.458 45.264 2 3.1597E-08 50818 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 121.9 118.14 27294000 0 0 0 7139900 0 0 0 20154000 0 0 0 0 0 0 0 17224 2346 15681 144293;144294 114922;114923;114924 114923 3813 3 FSSYSQMENWSR Unmodified 1520.6354 0.63542742 2346 Q13835 PKP1 Plakophilin-1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 63.173 62.915 2 2.8643E-05 72885 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 117.52 96.82 31663000 0 0 0 7560500 0 0 0 24103000 0 0 0 0 0 0 0 17225 2346 15681 144295;144296 114925;114926;114927 114927 3 FSTELEREK Unmodified 1137.5666 0.5666028 4890 Q9UH65 SWAP70 Switch-associated protein 70 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.74 27.938 3 0.019768 30028 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 48.602 31.688 163690000 0 0 0 7108200 10017000 15509000 9683800 10624000 8835900 13466000 18308000 17899000 8805200 15802000 27632000 17226 4890 15682 144297;144298;144299;144300;144301;144302;144303;144304;144305;144306;144307;144308 114928;114929;114930;114931 114928 4 FSTETTFLVDK Unmodified 1286.6394 0.63943339 1538 P48444 ARCN1 Coatomer subunit delta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 70.858 70.988 2 0.018442 81681 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 64.374 44.384 34172000 0 0 0 0 0 11661000 0 0 6149300 8533600 7828100 0 0 0 0 17227 1538 15683 144309;144310;144311;144312 114932 114932 0 FSTFFDDAPVFR Unmodified 1447.6772 0.67721588 384 O60231 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 89.263 89.388 2 0.0020921 103549 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.064 58.029 18105000 0 0 0 0 0 3327500 1309700 0 0 2352600 2062200 0 1014000 1253400 6785600 17228 384 15684 144313;144314;144315;144316;144317;144318;144319;144320 114933;114934;114935;114936;114937;114938;114939;114940 114936 8 FSTFISEGVR Unmodified 1141.5768 0.57677356 1607 P49848 TAF6 Transcription initiation factor TFIID subunit 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 66.892 66.916 2 0.019368 76700 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 47.853 15.438 29635000 0 0 0 1683700 2165100 3144900 1986100 3237100 0 5480500 3973600 0 2427700 0 5535900 17229 1607 15685 144321;144322;144323;144324;144325;144326;144327;144328;144329 114941;114942;114943 114941 3 FSTGTLSNTADAR Unmodified 1339.6368 0.63680763 457 O75128 COBL Protein cordon-bleu yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.213 41.349 2 2.2787E-11 45119 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 113.27 74.26 99906000 0 0 0 8952500 8549100 0 7274200 9379900 8298500 14424000 13048000 15100000 7643100 7235500 0 17230 457 15686 144330;144331;144332;144333;144334;144335;144336;144337;144338;144339;144340;144341 114944;114945;114946;114947;114948;114949;114950;114951;114952;114953;114954;114955;114956 114948 13 FSTLTDDPSPR Unmodified 1234.583 0.58298115 2463 Q14C86 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 42.501 42.819 2 0.010524 48180 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 59.908 45.905 34903000 0 0 0 0 0 12569000 0 0 0 12644000 0 0 0 0 9689000 17231 2463 15687 144342;144343;144344 114957 114957 1 FSTMEELVEHYK Unmodified 1511.6966 0.6966307 1035 P16333 NCK1 Cytoplasmic protein NCK1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 82.632 77.249 2;3 0.00059625 98615 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.958 66.81 72413000 54749000 17664000 0 0 0 0 0 0 0 0 0 0 0 0 0 17232 1035 15688 144345;144346;144347 114958;114959;114960;114961 114961 3 FSTMEELVEHYK Oxidation (M) 1527.6915 0.69154532 1035 P16333 NCK1 Cytoplasmic protein NCK1 yes yes 0 1 0 By MS/MS By matching 2 0 2 1 1 60.62 54.573 3 0.002437 73808 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.727 47.377 24027000 15908000 0 8119000 0 0 0 0 0 0 0 0 0 0 0 0 17233 1035 15688 144348;144349 114962 114962 1461 1 FSTPEQAAK Unmodified 977.48181 0.48181054 1008 P14866 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.427 23.631 2 0.008436 23979 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 69.628 34.735 498160000 0 0 0 20033000 19025000 35155000 35342000 29924000 25331000 52701000 42450000 61271000 49030000 46627000 81275000 17234 1008 15689 144350;144351;144352;144353;144354;144355;144356;144357;144358;144359;144360;144361 114963;114964;114965;114966;114967;114968;114969;114970;114971;114972;114973;114974 114972 8 FSTQGMGTFNPADYSDSTSTDVCGTK Oxidation (M) 2789.1433 0.1432543 2779 Q5T6F2 UBAP2 Ubiquitin-associated protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 69.305 69.593 3 2.5962E-13 79965 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 59.282 58.775 18458000 0 0 0 0 0 0 0 0 0 6593200 5753200 0 0 0 6112000 17235 2779 15690 144362;144363;144364 114975;114976;114977 114975 4418 3 FSTSSLLLR Unmodified 1022.576 0.57604528 5244 Q9Y5Q8 GTF3C5 General transcription factor 3C polypeptide 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.23 74.291 2 0.023114 85250 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 51.193 29.928 181720000 0 0 0 10603000 11608000 9352200 11022000 15911000 7371900 20867000 18433000 15122000 16759000 15457000 29212000 17236 5244 15691 144365;144366;144367;144368;144369;144370;144371;144372;144373;144374;144375;144376 114978;114979;114980;114981;114982 114980 4 FSTVAGESGSADTVRDPR Unmodified 1850.8759 0.8758687 768 P04040 CAT Catalase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.048 39.228 3 0.00036942 43085 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 35.304 29.273 392080000 0 0 0 54984000 19473000 20821000 18842000 65094000 20495000 41391000 28591000 45855000 29174000 21953000 25409000 17237 768 15692 144377;144378;144379;144380;144381;144382;144383;144384;144385;144386;144387;144388 114983;114984;114985;114986;114987;114988;114989;114990;114991 114989 9 FSTWEPTK Unmodified 994.476 0.47599688 5060 Q9UPT9 USP22 Ubiquitin carboxyl-terminal hydrolase 22 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 46.141 46.329 2 0.0089203 52044 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 84.568 45.605 172750000 0 0 0 18582000 0 0 20422000 27823000 16953000 18880000 29216000 16146000 24726000 0 0 17238 5060 15693 144389;144390;144391;144392;144393;144394;144395;144396;144397 114992;114993;114994;114995;114996;114997;114998;114999;115000 114997 9 FSTWTNTEFR Unmodified 1287.5884 0.58840088 834 P07099 EPHX1 Epoxide hydrolase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.227 66.312 2 0.022804 76090 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 43.282 31.792 80283000 0 0 0 3292700 4258700 6860300 4015000 6478000 3747100 8704400 7263100 11431000 7092700 6686100 10454000 17239 834 15694 144398;144399;144400;144401;144402;144403;144404;144405;144406;144407;144408;144409 115001;115002;115003;115004 115001 4 FSTYTSDKDENK Unmodified 1433.6311 0.63105355 3536 Q8WU90 ZC3H15 Zinc finger CCCH domain-containing protein 15 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 15.443 15.614 3 0.010689 14193 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 42.797 36.849 67935000 0 0 0 4143500 2859400 2774900 5486400 0 0 5801700 8613900 11129000 6691000 7409500 13025000 17240 3536 15695 144410;144411;144412;144413;144414;144415;144416;144417;144418;144419 115005;115006;115007;115008;115009;115010 115007 6 FSVCVLGDQQHCDEAK Unmodified 1891.8193 0.8192818 1927 P62906 RPL10A 60S ribosomal protein L10a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.42 3.66 3 1 8 1 2 1 1 1 1 1 1 1 1 1 60.872 59.175 3 1.6841E-23 77200 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.28 95.862 134910000 12753000 59426000 4232000 0 0 0 2276600 0 3979900 4130200 6474100 6306800 11302000 11490000 12540000 17241 1927 15696 144420;144421;144422;144423;144424;144425;144426;144427;144428;144429;144430;144431 115011;115012;115013;115014;115015;115016;115017 115012 5 FSVSPVVR Unmodified 889.50215 0.50215205 980 P13639 EEF2 Elongation factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 54.925 53.609 2 0.0050119 60182 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 134.06 112.29 5496300000 817830000 577780000 216300000 119040000 103060000 158450000 133910000 123090000 93526000 201280000 530200000 440600000 161950000 422550000 1396800000 17242 980 15697 144432;144433;144434;144435;144436;144437;144438;144439;144440;144441;144442;144443;144444;144445;144446;144447 115018;115019;115020;115021;115022;115023;115024;115025;115026;115027;115028;115029;115030;115031;115032;115033;115034 115029 14 FSVSPVVRVAVEAK Unmodified 1486.8508 0.85076357 980 P13639 EEF2 Elongation factor 2 yes yes 0 0 1 By MS/MS By MS/MS 2.2 0.4 4 1 4 1 82.099 75.518 3 0.00039385 96180 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.789 68.37 589910000 540600000 49307000 0 0 0 0 0 0 0 0 0 0 0 0 0 17243 980 15698 144448;144449;144450;144451;144452 115035;115036;115037;115038;115039;115040 115037 5 FSVTHHYLVQESTDK Unmodified 1789.8635 0.8635131 2484 Q15042 RAB3GAP1 Rab3 GTPase-activating protein catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 49.545 45.843 3 2.8061E-07 48000 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.108 88.108 21362000 5431200 0 0 0 0 0 0 0 0 0 0 0 0 0 15931000 17244 2484 15699 144453;144454 115041;115042 115041 2 FSVVSDK Unmodified 780.40177 0.4017693 5231 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 33.272 28.569 2 0.02234 37122 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.43 47.789 493630000 22713000 450600000 20309000 0 0 0 0 0 0 0 0 0 0 0 0 17245 5231 15700 144455;144456;144457 115043;115044;115045 115043 3 FSWFAGEK Unmodified 970.45487 0.45486751 1120 P21266 GSTM3 Glutathione S-transferase Mu 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 71.033 71.097 2 0.02313 80769 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.589 4.4985 134180000 0 0 0 3019800 3346300 8810200 4663700 0 3216500 6506300 15436000 15557000 8114000 13080000 52425000 17246 1120 15701 144458;144459;144460;144461;144462;144463;144464;144465;144466;144467;144468 115046;115047;115048;115049;115050;115051;115052 115048 7 FSYIGLSQNNLR Unmodified 1410.7256 0.72556306 3984 Q96S59 RANBP9 Ran-binding protein 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 74.113 74.083 2 0.0011698 85361 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 85.355 73.865 52370000 0 0 0 5208200 5701700 9987800 4919800 5658300 4089400 8707000 0 0 8098200 0 0 17247 3984 15702 144469;144470;144471;144472;144473;144474;144475;144476 115053;115054;115055;115056;115057 115053 5 FSYRENLEDEYEPR Unmodified 1845.817 0.81695684 1583 P49643 PRIM2 DNA primase large subunit yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 58.353 58.614 3 0.00044121 66702 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 64.675 60.573 29989000 0 0 0 0 0 4689700 0 4666300 3672900 0 4086900 0 0 4027800 8845500 17248 1583 15703 144477;144478;144479;144480;144481;144482 115058;115059;115060 115058 2 FTADEAR Unmodified 808.37153 0.37153181 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.931 14.094 2 0.023501 13676 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 84.699 30.174 101110000 0 0 0 4271600 8190300 6903000 8612600 6346500 4632400 6886600 8426600 10503000 7375800 12798000 16165000 17249 2930 15704 144483;144484;144485;144486;144487;144488;144489;144490;144491;144492;144493;144494 115061;115062;115063;115064 115063 4 FTAEELSNMASELAK Oxidation (M) 1655.7713 0.7712522 3166 Q86VI3 IQGAP3 Ras GTPase-activating-like protein IQGAP3 yes yes 0 1 0 By MS/MS 2 0 1 1 79.075 74.34 2 0.0019917 92714 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.827 46.492 17390000 0 17390000 0 0 0 0 0 0 0 0 0 0 0 0 0 17250 3166 15705 144495 115065 115065 4783 1 FTAGDFSTTVIQNVNK Unmodified 1740.8683 0.86826413 5237 Q9Y5K8 ATP6V1D V-type proton ATPase subunit D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 79.733 79.165 2 1.578E-35 91317 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 151.98 118.89 229890000 0 50576000 0 6798400 8738300 14059000 10641000 19055000 9967200 37893000 18272000 26270000 0 11257000 16366000 17251 5237 15706 144496;144497;144498;144499;144500;144501;144502;144503;144504;144505;144506;144507;144508 115066;115067;115068;115069;115070;115071;115072;115073;115074;115075;115076;115077;115078 115070 13 FTAIIGPNGSGK Unmodified 1160.619 0.61897272 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.528 52.671 2 2.3682E-05 59327 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 91.658 72.883 84444000 0 0 0 3683200 3644400 7084600 6881400 5079300 4410700 9494400 8752600 13189000 6921600 5785700 9516700 17252 2431 15707 144509;144510;144511;144512;144513;144514;144515;144516;144517;144518;144519;144520 115079;115080;115081;115082;115083;115084;115085;115086;115087;115088;115089;115090 115084 10 FTALSSESIENLPSVFGSNPK Unmodified 2223.1059 0.10592822 3615 Q92538 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 93.95 89.904 2 1.2145E-58 111679 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 184.02 174.82 25827000 0 25827000 0 0 0 0 0 0 0 0 0 0 0 0 0 17253 3615 15708 144521;144522 115091 115091 1 FTAPSMASVLEQLNVINGILFIPLSQK Unmodified 2929.5987 0.59870156 465 O75153 CLUH Clustered mitochondria protein homolog yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 106.2 101.98 3 4.6204E-07 122761 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 38.386 38.131 3926900 0 3926900 0 0 0 0 0 0 0 0 0 0 0 0 0 17254 465 15709 144523;144524 115092 115092 1 FTASAGIQVVGDDLTVTNPK Unmodified 2032.0477 0.047685059 827 P06733 ENO1 Alpha-enolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.26 0.524 5 82 38 52 46 27 96.149 91.81 2;3 4.4447E-262 99001 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 314.17 299.01 21035000000 5373400000 14643000000 1018100000 0 0 0 0 0 0 0 0 0 0 0 0 17255 827 15710 144525;144526;144527;144528;144529;144530;144531;144532;144533;144534;144535;144536;144537;144538;144539;144540;144541;144542;144543;144544;144545;144546;144547;144548;144549;144550;144551;144552;144553;144554;144555;144556;144557;144558;144559;144560;144561;144562;144563;144564;144565;144566;144567;144568;144569;144570;144571;144572;144573;144574;144575;144576;144577;144578;144579;144580;144581;144582;144583;144584;144585;144586;144587;144588;144589;144590;144591;144592;144593;144594;144595;144596;144597;144598;144599;144600;144601;144602;144603;144604;144605;144606;144607;144608;144609;144610;144611;144612;144613;144614;144615;144616;144617;144618;144619;144620;144621;144622;144623;144624;144625;144626;144627;144628;144629;144630;144631;144632;144633;144634;144635;144636;144637;144638;144639;144640;144641;144642;144643;144644;144645;144646;144647;144648;144649 115093;115094;115095;115096;115097;115098;115099;115100;115101;115102;115103;115104;115105;115106;115107;115108;115109;115110;115111;115112;115113;115114;115115;115116;115117;115118;115119;115120;115121;115122;115123;115124;115125;115126;115127;115128;115129;115130;115131;115132;115133;115134;115135;115136;115137;115138;115139;115140;115141;115142;115143;115144;115145;115146;115147;115148;115149;115150;115151;115152;115153;115154;115155;115156;115157;115158;115159;115160;115161;115162;115163;115164;115165;115166;115167;115168;115169;115170;115171;115172;115173;115174;115175;115176;115177;115178;115179;115180;115181;115182;115183;115184;115185;115186;115187;115188;115189;115190;115191;115192;115193;115194;115195;115196;115197;115198;115199;115200;115201;115202;115203;115204;115205;115206;115207;115208;115209;115210;115211;115212;115213;115214;115215;115216;115217;115218;115219;115220;115221;115222;115223;115224;115225;115226;115227;115228;115229;115230;115231;115232;115233;115234;115235;115236;115237;115238;115239;115240;115241;115242;115243;115244;115245;115246;115247;115248;115249;115250;115251;115252;115253;115254;115255;115256;115257;115258;115259;115260;115261;115262;115263;115264;115265;115266;115267;115268;115269;115270;115271;115272;115273;115274;115275;115276;115277;115278;115279;115280;115281;115282;115283;115284;115285;115286;115287;115288;115289;115290;115291;115292;115293 115262 186 FTASASHTERK Unmodified 1233.6102 0.61019895 5196 Q9Y4E5 ZNF451 Zinc finger protein 451 yes yes 0 0 1 By MS/MS 2 0 2 2 8.2356 4.7205 2;3 0.00060088 8195 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 112.36 93.577 148110000 148110000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17256 5196 15711 144650;144651 115294;115295 115294 1 FTASGIANLR Unmodified 1048.5665 0.56654322 3080 Q7Z3B3 KANSL1 KAT8 regulatory NSL complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 59.848 59.987 2 0.0025706 68339 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 82.279 57.46 40259000 0 0 0 0 2672600 4142500 3703900 4063200 2533900 4617700 3715200 5551500 4713600 4544500 0 17257 3080 15712 144652;144653;144654;144655;144656;144657;144658;144659;144660;144661 115296;115297;115298;115299;115300;115301;115302;115303;115304;115305 115297 10 FTASIQR Unmodified 821.43955 0.43955179 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 30.019 30.163 2 0.024035 31469 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 83.614 48.509 471320000 0 0 0 39618000 28783000 43660000 40979000 0 26972000 61444000 59267000 67184000 52659000 50749000 0 17258 4634 15713 144662;144663;144664;144665;144666;144667;144668;144669;144670;144671 115306;115307;115308 115307 1 FTATASLGVIHK Unmodified 1243.6925 0.69247202 4011 Q99460 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 65.01 58.981 3 0.0051861 79172 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.225 48.85 42773000 40607000 0 2165500 0 0 0 0 0 0 0 0 0 0 0 0 17259 4011 15714 144672;144673 115309;115310;115311 115310 3 FTATMSTPDK Unmodified 1097.5063 0.50631073 2801 Q5TKA1 LIN9 Protein lin-9 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 38.752 33.784 2 0.012445 37995 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.256 33.495 24556000 0 24556000 0 0 0 0 0 0 0 0 0 0 0 0 0 17260 2801 15715 144674;144675;144676 115312;115313;115314 115313 2 FTDDYQLFEELGK Unmodified 1603.7406 0.740604 2315 Q13555 CAMK2G Calcium/calmodulin-dependent protein kinase type II subunit gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 86.676 86.789 2 5.409E-05 100409 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.155 77.5 11728000 0 0 0 0 0 1920100 0 0 0 0 0 3201000 0 0 6606400 17261 2315 15716 144677;144678;144679;144680;144681;144682 115315;115316;115317;115318;115319;115320 115317 6 FTDEEVDELYR Unmodified 1414.6252 0.62523989 229 P19105;O14950 MYL12A;MYL12B Myosin regulatory light chain 12A;Myosin regulatory light chain 12B yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.26 66.345 2 2.2041E-47 75362 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 218.55 210.9 263710000 0 0 0 18735000 16397000 26043000 19378000 15848000 13353000 18497000 20065000 31140000 14542000 24504000 45203000 17262 229 15717 144683;144684;144685;144686;144687;144688;144689;144690;144691;144692;144693;144694 115321;115322;115323;115324;115325;115326;115327;115328;115329;115330;115331;115332;115333;115334;115335;115336;115337;115338;115339;115340 115329 20 FTDEEVDELYREAPIDK Unmodified 2067.9637 0.96368066 229 P19105;O14950 MYL12A;MYL12B Myosin regulatory light chain 12A;Myosin regulatory light chain 12B yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 78.6 78.704 3 1.0493E-06 90923 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 81.346 74.572 161860000 0 0 0 0 4656400 15409000 5231300 11080000 13338000 23351000 17454000 23074000 12217000 10942000 25107000 17263 229 15718 144695;144696;144697;144698;144699;144700;144701;144702;144703;144704;144705 115341;115342;115343;115344;115345;115346;115347;115348;115349;115350;115351;115352;115353 115343 13 FTDFDEVRQEIEAETDRVTGTNK Unmodified 2699.2675 0.26746725 1630 P50570 DNM2 Dynamin-2 yes yes 0 0 2 By MS/MS By MS/MS 2.67 0.471 1 2 2 1 92.042 87.084 4 0.0023387 110472 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 34.701 30.891 85443000 76096000 9346400 0 0 0 0 0 0 0 0 0 0 0 0 0 17264 1630 15719 144706;144707;144708 115354;115355 115355 2 FTDGQLVSQK Unmodified 1121.5717 0.57168818 4307 Q9GZT9 EGLN1 Egl nine homolog 1 yes yes 0 0 0 By MS/MS 2 0 1 1 40.396 35.344 2 1.0986E-05 45982 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.21 86.618 234740000 0 234740000 0 0 0 0 0 0 0 0 0 0 0 0 0 17265 4307 15720 144709 115356;115357 115356 2 FTDLFEK Unmodified 898.44363 0.44363412 3549 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 67.454 61.468 2 0.034909 75732 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 128.57 73.125 423110000 31536000 366790000 24781000 0 0 0 0 0 0 0 0 0 0 0 0 17266 3549 15721 144710;144711;144712 115358 115358 0 FTDSAIAMNSK Oxidation (M) 1199.5492 0.54923818 3576 Q8WWM7 ATXN2L Ataxin-2-like protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 29.526 29.494 2 0.0022118 32241 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 64.103 48.441 45236000 0 0 0 6730800 4302300 5973300 7307400 5404400 6640300 8877200 0 0 0 0 0 17267 3576 15722 144713;144714;144715;144716;144717;144718;144719;144720 115359;115360;115361;115362;115363;115364;115365 115364 5069 5 FTDSAIAMNSK Unmodified 1183.5543 0.55432356 3576 Q8WWM7 ATXN2L Ataxin-2-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 42.621 42.356 2 1.0386E-22 54229 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 187.5 165.54 282900000 0 146230000 0 6667900 6557600 7608500 10979000 10333000 6427700 11903000 15380000 15093000 12181000 11205000 22333000 17268 3576 15722 144721;144722;144723;144724;144725;144726;144727;144728;144729;144730;144731;144732;144733 115366;115367;115368;115369;115370;115371;115372;115373;115374;115375;115376;115377;115378;115379 115369 13 FTDTRKDEQER Unmodified 1423.6692 0.66917039 980 P13639 EEF2 Elongation factor 2 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.3976 6.5223 3 0.0029895 4406 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 98.353 89.303 327970000 0 0 0 7850500 10624000 2828500 13556000 17033000 5777000 12026000 43945000 46924000 20147000 40474000 106790000 17269 980 15723 144734;144735;144736;144737;144738;144739;144740;144741;144742;144743;144744;144745 115380;115381;115382;115383;115384;115385;115386;115387;115388;115389 115384 9 FTEDSLLR Unmodified 979.49746 0.4974606 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 54.921 55.053 2 0.0064875 63787 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 100.45 50.412 308470000 0 0 0 19700000 21782000 20112000 22654000 18271000 22707000 26281000 39136000 25757000 19117000 24025000 48928000 17270 1201 15724 144746;144747;144748;144749;144750;144751;144752;144753;144754;144755;144756;144757 115390;115391;115392;115393;115394;115395;115396;115397;115398;115399;115400;115401 115400 7 FTEEVVK Unmodified 850.44363 0.44363412 1561 P49189 ALDH9A1 4-trimethylaminobutyraldehyde dehydrogenase yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 30.99 31.302 2 0.03326 32938 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.138 23.378 149650000 0 0 0 20931000 0 0 0 0 0 7821600 0 27616000 13430000 23242000 56610000 17271 1561 15725 144758;144759;144760;144761;144762;144763 115402;115403 115402 2 FTEPGAGLR Unmodified 946.48723 0.48723027 5219 Q9Y546 LRRC42 Leucine-rich repeat-containing protein 42 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 40.392 40.586 2 0.024533 45221 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 50.607 18.252 45242000 0 0 0 0 3102000 4637300 5127100 4180400 2164700 0 5152100 0 5033100 6116800 9728800 17272 5219 15726 144764;144765;144766;144767;144768;144769;144770;144771;144772 115404;115405;115406 115405 3 FTEPGAGLRALQK Unmodified 1386.7619 0.76194857 5219 Q9Y546 LRRC42 Leucine-rich repeat-containing protein 42 yes yes 0 0 1 By MS/MS 2 0 1 1 66.612 58.317 3 0.011144 78176 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.934 35.97 13987000 13987000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17273 5219 15727 144773 115407 115407 1 FTEVYAINR Unmodified 1111.5662 0.56620887 399 O60437 PPL Periplakin yes yes 0 0 0 By MS/MS By MS/MS By matching By matching 10 0 4 1 1 1 1 54.199 54.26 2 0.0037643 62510 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 96.253 64.318 17271000 0 0 0 5066000 0 0 3034600 5352600 0 0 0 3817600 0 0 0 17274 399 15728 144774;144775;144776;144777 115408;115409 115409 1 FTEYETQVK Unmodified 1143.5448 0.54480473 2242 Q13148 TARDBP TAR DNA-binding protein 43 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.804 34.986 2 7.4724E-06 38781 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 155.75 108.69 2272600000 0 0 0 124220000 85522000 127920000 202830000 160110000 181940000 211060000 234560000 204290000 196120000 208170000 335870000 17275 2242 15729 144778;144779;144780;144781;144782;144783;144784;144785;144786;144787;144788;144789 115410;115411;115412;115413;115414;115415;115416;115417;115418;115419;115420;115421;115422;115423;115424;115425 115411 16 FTFHLEPQAQATQVSDVPATSR Unmodified 2429.1975 0.19753719 434 O60826 CCDC22 Coiled-coil domain-containing protein 22 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 76.261 76.359 3 4.373E-14 87733 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.524 55.862 110160000 0 0 0 0 3438000 13737000 5553500 9051700 7200900 14000000 0 18886000 8000900 9123800 21174000 17276 434 15730 144790;144791;144792;144793;144794;144795;144796;144797;144798;144799 115426;115427;115428;115429;115430;115431;115432;115433;115434 115429 8 FTGEQPSISGTFGLK Unmodified 1567.7882 0.7882229 3908 Q96KM6 ZNF512B Zinc finger protein 512B yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 76.064 76.162 2 0.0031231 87498 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 45.077 17.963 43633000 0 0 0 0 2120600 5701700 3882400 2882300 3507000 5449600 0 5561900 4598100 3954600 5974600 17277 3908 15731 144800;144801;144802;144803;144804;144805;144806;144807;144808;144809 115435;115436;115437 115436 3 FTGNIMQVPPLYSALK Oxidation (M) 1793.9386 0.9385923 3572 Q8WWH5 TRUB1 Probable tRNA pseudouridine synthase 1 yes yes 0 1 0 By MS/MS 10 0 1 1 84.315 84.352 2 7.7535E-05 97714 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 74.392 61.192 5620000 0 0 0 0 0 5620000 0 0 0 0 0 0 0 0 0 17278 3572 15732 144810 115438 115438 5060 1 FTGNQIQNR Unmodified 1076.5363 0.53630573 261 O15164 TRIM24 Transcription intermediary factor 1-alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.211 19.407 2 0.0031106 19742 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 127.84 116.08 108150000 0 0 0 4962600 6860400 8591500 6709600 7633500 5104700 10969000 7633900 11810000 11060000 9313400 17506000 17279 261 15733 144811;144812;144813;144814;144815;144816;144817;144818;144819;144820;144821;144822 115439;115440;115441;115442;115443;115444;115445;115446;115447;115448;115449;115450;115451;115452 115445 14 FTGTIASFNINTNAWVAR Unmodified 1982.001 0.0010096381 2915 Q6P1A2 LPCAT3 Lysophospholipid acyltransferase 5 yes yes 0 0 0 By MS/MS 10 0 1 1 65.309 64.617 3 0.011492 74687 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 19.39 0 5373100 0 0 0 5373100 0 0 0 0 0 0 0 0 0 0 0 17280 2915 15734 144823 115453 115453 1 FTGVGVSK Unmodified 793.4334 0.43340378 3148 Q86UE8 TLK2 Serine/threonine-protein kinase tousled-like 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 26.776 27.059 2 0.035078 29407 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 52.716 16.531 39562000 0 0 0 0 0 5367100 6699200 0 3091900 0 6034100 0 6790800 4452700 7126100 17281 3148 15735 144824;144825;144826;144827;144828;144829;144830 115454 115454 1 FTHDDSHLVSLGGK Unmodified 1511.7369 0.73685603 2665 Q32P44 EML3 Echinoderm microtubule-associated protein-like 3 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 42.322 42.48 3 0.038822 46879 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 28.351 16.436 34328000 0 0 0 5810400 0 0 0 0 3020000 10079000 0 10583000 0 4836000 0 17282 2665 15736 144831;144832;144833;144834;144835 115455 115455 1 FTILDSQGK Unmodified 1007.5288 0.52876073 4751 Q9NYU2 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 53.357 53.324 2 0.0030483 60238 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 91.318 66.467 92248000 0 0 0 7594200 6434000 23887000 11440000 9988400 0 0 0 0 0 0 32904000 17283 4751 15737 144836;144837;144838;144839;144840;144841 115456;115457 115456 2 FTILNVR Unmodified 861.50724 0.50723743 1479 P43378 PTPN9 Tyrosine-protein phosphatase non-receptor type 9 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 70.08 70.303 2 0.045927 80591 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 66.138 35.469 18697000 0 0 0 0 0 0 3108200 2365500 1783400 2828100 0 3935000 1988800 0 2688400 17284 1479 15738 144842;144843;144844;144845;144846;144847;144848 115458 115458 1 FTISDHPQPIDPLLK Unmodified 1719.9196 0.91957142 3170 Q86VP6 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.83 7 1 13 2 4 2 1 1 2 1 1 1 1 1 1 1 1 1 81.675 79.858 2;3 1.0091E-22 91846 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 118.48 93.692 3215000000 408240000 1441400000 692830000 10745000 15582000 120500000 19679000 28960000 25977000 79317000 45467000 50078000 27269000 42538000 206380000 17285 3170 15739 144849;144850;144851;144852;144853;144854;144855;144856;144857;144858;144859;144860;144861;144862;144863;144864;144865;144866;144867;144868;144869 115459;115460;115461;115462;115463;115464;115465;115466;115467;115468;115469;115470;115471;115472;115473;115474;115475;115476;115477;115478;115479;115480;115481 115460 18 FTISEAVLER Unmodified 1163.6186 0.61863837 5054 Q9UPQ0 LIMCH1 LIM and calponin homology domains-containing protein 1 yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 76.643 76.713 2 0.0044145 88233 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 72.928 34.625 32483000 0 0 0 0 2688200 7134900 3733000 2077600 3945300 6784000 6119700 0 0 0 0 17286 5054 15740 144870;144871;144872;144873;144874;144875;144876 115482;115483 115482 2 FTITPPTAQVVGVLK Unmodified 1569.913 0.91302948 1705 P52907 CAPZA1 F-actin-capping protein subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 88.759 87.418 2;3 1.5655E-42 109215 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.76 107.53 549770000 111400000 250300000 3563900 2505800 10007000 10005000 6202800 16740000 7488600 25335000 18059000 18949000 6258300 11111000 51848000 17287 1705 15741 144877;144878;144879;144880;144881;144882;144883;144884;144885;144886;144887;144888;144889;144890;144891;144892;144893 115484;115485;115486;115487;115488;115489;115490;115491;115492;115493;115494;115495;115496;115497;115498;115499;115500;115501;115502 115488 18 FTITPSTTQVVGILK Unmodified 1603.9185 0.91850879 1524 P47755 CAPZA2 F-actin-capping protein subunit alpha-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 87.009 86.61 2 0.0010453 108178 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 63.415 53.983 150190000 0 86841000 0 0 3870000 3989400 0 5190600 2284400 8596200 7624300 6871200 0 4087000 20831000 17288 1524 15742 144894;144895;144896;144897;144898;144899;144900;144901;144902;144903 115503;115504 115503 1 FTKPELDACDVPEK Unmodified 1647.7814 0.78142296 452 O75061 DNAJC6 Putative tyrosine-protein phosphatase auxilin yes yes 0 0 1 By MS/MS By MS/MS By matching 10 0 3 1 1 1 52.165 52.237 3 0.0015118 59557 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 36.928 27.878 20079000 0 0 0 0 5313500 0 5479900 0 0 0 0 0 0 0 9285300 17289 452 15743 144904;144905;144906 115505;115506 115506 2 FTKTSQGRSWNTGNGSPDAICFSVDK Unmodified 2859.3246 0.32460498 522 O75592 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 18.499 18.565 6 0.0026871 19179 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 17.794 10.996 46155000 0 0 0 6773600 7334400 4788600 6214900 6546100 0 7026500 0 7470600 0 0 0 17290 522 15744 144907;144908;144909;144910;144911;144912;144913 115507;115508 115507 2 FTLAGHTK Unmodified 873.47085 0.47085192 1865 P61964 WDR5 WD repeat-containing protein 5 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 24.575 23.668 2 0.008471 23647 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 86.095 61.463 434820000 201000000 20711000 23077000 0 0 12977000 10945000 16512000 8172100 18559000 22137000 0 29517000 27326000 43888000 17291 1865 15745 144914;144915;144916;144917;144918;144919;144920;144921;144922;144923;144924;144925;144926 115509;115510;115511;115512;115513;115514;115515 115511 4 FTLELDR Unmodified 892.46543 0.46543219 2604 Q16513 PKN2 Serine/threonine-protein kinase N2 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 66.446 66.561 2 0.050331 75454 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.717 16.835 49332000 0 0 0 0 2787800 5452500 4726900 0 0 6293500 6527900 0 6389800 4821000 12332000 17292 2604 15746 144927;144928;144929;144930;144931;144932;144933;144934 115516 115516 1 FTLIDGIR Unmodified 933.52837 0.5283668 4398 Q9H4H8 FAM83D Protein FAM83D yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 76.967 77.114 2 0.020846 89029 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 62.464 39.422 27766000 0 0 0 0 0 3111100 0 0 2758200 2670700 2953100 3291200 2687300 3441500 6853200 17293 4398 15747 144935;144936;144937;144938;144939;144940;144941;144942 115517;115518;115519;115520;115521 115517 5 FTLNLQQ Unmodified 862.45487 0.45486751 2177 Q10471 GALNT2 Polypeptide N-acetylgalactosaminyltransferase 2;Polypeptide N-acetylgalactosaminyltransferase 2 soluble form yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 74.493 74.177 2 0.022293 89944 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.55 80.49 122250000 0 25340000 0 4913700 7196400 5203300 7870000 6197100 6292300 10015000 10260000 10446000 8637800 6503900 13376000 17294 2177 15748 144943;144944;144945;144946;144947;144948;144949;144950;144951;144952;144953;144954;144955 115522;115523 115522 2 FTLNPNPTGVQNPHIER Unmodified 1932.9806 0.98060855 1491 P45985 MAP2K4 Dual specificity mitogen-activated protein kinase kinase 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.851 64.938 3 8.1241E-10 73511 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 85.636 79.882 286170000 0 0 0 12682000 10015000 26017000 21996000 19886000 19782000 29652000 31250000 27980000 20785000 22395000 43734000 17295 1491 15749 144956;144957;144958;144959;144960;144961;144962;144963;144964;144965;144966;144967 115524;115525;115526;115527;115528;115529;115530;115531;115532;115533;115534;115535;115536 115531 12 FTLRDEGK Unmodified 964.49779 0.49779495 1014 P15170;Q8IYD1 GSPT1;GSPT2 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A;Eukaryotic peptide chain release factor GTP-binding subunit ERF3B yes no 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 23.6 23.808 2 0.0059528 24830 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 153.08 15.179 310050000 0 0 0 15009000 10755000 25024000 17373000 0 11278000 27419000 21490000 44556000 37420000 35778000 63945000 17296 1014 15750 144968;144969;144970;144971;144972;144973;144974;144975;144976;144977;144978 115537;115538;115539;115540 115537 1 FTLSGGNWNTVSETAK Unmodified 1710.8213 0.82131394 2531 Q15418 RPS6KA1 Ribosomal protein S6 kinase alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74.911 74.001 2 3.8125E-23 93651 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 147.33 121.94 174610000 59031000 6130100 4640400 4141300 4706400 10606000 5760300 7255000 7228200 13227000 7863000 10338000 6217700 8194900 19271000 17297 2531 15751 144979;144980;144981;144982;144983;144984;144985;144986;144987;144988;144989;144990;144991;144992;144993 115541;115542;115543;115544;115545;115546;115547;115548;115549;115550;115551;115552;115553;115554;115555 115547 15 FTMDVIGGK Unmodified 966.48445 0.48445308 4386 Q9H3S7 PTPN23 Tyrosine-protein phosphatase non-receptor type 23 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 64.393 64.617 2 0.038908 73937 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 44.753 17.623 23338000 0 0 0 0 0 0 2643400 0 2481900 4218600 0 0 3252900 3239400 7501700 17298 4386 15752 144994;144995;144996;144997;144998;144999 115556;115557 115556 2 FTMELAK Unmodified 838.42588 0.42587556 721 P00367;P49448 GLUD1;GLUD2 Glutamate dehydrogenase 1, mitochondrial;Glutamate dehydrogenase 2, mitochondrial yes no 0 0 0 By MS/MS 10 0 1 1 53.571 53.735 2 0.035265 60979 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 70.912 47.876 12170000 0 0 0 0 0 0 0 12170000 0 0 0 0 0 0 0 17299 721 15753 145000 115558 115558 1 FTMVQVWPVR Oxidation (M) 1277.6591 0.6590634 1398 P38606 ATP6V1A V-type proton ATPase catalytic subunit A yes yes 0 1 0 By MS/MS 10 0 1 1 77.591 77.589 2 0.0090041 89648 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 86.794 71.132 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17300 1398 15754 145001 115559 115559 2163 1 FTNEDHLAVHK Unmodified 1309.6415 0.64149908 1055;1019 P17544;P15336 ATF7;ATF2 Cyclic AMP-dependent transcription factor ATF-7;Cyclic AMP-dependent transcription factor ATF-2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.918 23.124 3 0.00017592 24048 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 90.827 74.937 297510000 0 0 0 20136000 16191000 19862000 24295000 19073000 14636000 34947000 14423000 34527000 33477000 29558000 36383000 17301 1055;1019 15755 145002;145003;145004;145005;145006;145007;145008;145009;145010;145011;145012;145013 115560;115561;115562;115563;115564;115565;115566;115567;115568;115569;115570 115561 4 FTNFQSPNIDPTEENDLDDSLSVK Unmodified 2724.2402 0.24024945 2973 Q6ULP2 AFTPH Aftiphilin yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 84.974 80.97 3 5.0518E-48 100479 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.45 114.71 32090000 0 32090000 0 0 0 0 0 0 0 0 0 0 0 0 0 17302 2973 15756 145014;145015 115571;115572 115571 2 FTNLLTSILDSAETK Unmodified 1651.8669 0.86686715 2629 Q16719 KYNU Kynureninase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.11 2.47 6 2 1 2 5 1 1 99.449 95.635 2;3 7.3297E-103 118837 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 218.94 185.19 526480000 218430000 303000000 1504900 0 0 0 0 0 0 0 0 0 0 0 3543300 17303 2629 15757 145016;145017;145018;145019;145020;145021;145022;145023;145024 115573;115574;115575;115576;115577;115578;115579;115580;115581;115582;115583 115574 11 FTNLLTSILDSAETKN Unmodified 1765.9098 0.90979459 2629 Q16719 KYNU Kynureninase yes yes 0 0 1 By MS/MS 2 0 1 1 99.88 91.749 2 4.734E-31 118238 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 170 154.14 25395000 25395000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17304 2629 15758 145025 115584 115584 1 FTNMLGQPGSTALDLFK Oxidation (M) 1854.9186 0.91858514 494 O75400 PRPF40A Pre-mRNA-processing factor 40 homolog A yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 87.164 87.266 2 5.3818E-96 101149 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 188.48 179.97 173230000 0 0 0 0 3978800 8414300 0 12135000 9149200 28178000 18994000 13579000 6636000 12988000 59181000 17305 494 15759 145026;145027;145028;145029;145030;145031;145032;145033;145034;145035 115585;115586;115587;115588;115589;115590 115586 640 6 FTNSLTTVGSNK Unmodified 1267.6408 0.64083038 3239 Q8IWE2 FAM114A1 Protein NOXP20 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.91 3.42 2 1 8 1 2 1 1 1 1 1 1 1 1 45.631 39.753 2 0.00012369 45900 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 118.28 56.6 58720000 19551000 39170000 0 0 0 0 0 0 0 0 0 0 0 0 0 17306 3239 15760 145036;145037;145038;145039;145040;145041;145042;145043;145044;145045;145046 115591;115592;115593;115594;115595;115596;115597;115598;115599;115600 115592 10 FTNTQITEHYSTCIK Unmodified 1841.8618 0.86179854 2467 Q15003 NCAPH Condensin complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.07 3.94 6 1 7 3 2 2 1 1 1 1 1 1 1 55.909 52.988 2;3 3.6393E-41 71406 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 151.98 145.87 657490000 394310000 143910000 84337000 0 2608700 7557200 3221700 2588400 3146400 8643000 0 0 0 7162900 0 17307 2467 15761 145047;145048;145049;145050;145051;145052;145053;145054;145055;145056;145057;145058;145059;145060 115601;115602;115603;115604;115605;115606;115607;115608;115609;115610;115611 115606 11 FTPFANPTHK Unmodified 1158.5822 0.58219329 4763 Q9NZC9 SMARCAL1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 42.567 42.784 3 0.040288 46555 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 27.163 11.534 49733000 0 0 0 0 4303300 0 0 7751900 5342100 6475900 5259700 0 5391500 0 15209000 17308 4763 15762 145061;145062;145063;145064;145065;145066;145067 115612 115612 1 FTPPAESGSPSK Unmodified 1203.5772 0.57716749 3025 Q70E73 RAPH1 Ras-associated and pleckstrin homology domains-containing protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 31.999 27.511 2 0.028119 35719 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.92 51.55 79232000 0 79232000 0 0 0 0 0 0 0 0 0 0 0 0 0 17309 3025 15763 145068;145069 115613 115613 1 FTPQEAYSHLK Unmodified 1319.651 0.65100113 3076 Q7Z2Z2 EFTUD1 Elongation factor Tu GTP-binding domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.29 3.61 5 2 2 1 2 1 1 57.117 52.932 2;3 0.00013888 66444 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 84.507 75.313 382840000 210970000 73706000 79501000 0 0 8525800 0 0 0 0 0 0 0 0 10132000 17310 3076 15764 145070;145071;145072;145073;145074;145075;145076 115614;115615;115616;115617;115618;115619;115620;115621;115622;115623 115621 8 FTPTTLPTSQNSIHPVR Unmodified 1894.9901 0.9901106 3755 Q96BD5 PHF21A PHD finger protein 21A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 61.758 61.758 3 0.0029264 70544 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 52.172 46.268 64353000 0 0 0 5350900 6661100 12481000 8466000 12407000 0 3769800 0 0 0 8434900 6782500 17311 3755 15765 145077;145078;145079;145080;145081;145082;145083;145084 115624;115625;115626;115627;115628;115629 115626 2 FTPVDESVTFIGR Unmodified 1466.7405 0.74054442 2183 Q12768 KIAA0196 WASH complex subunit strumpellin yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 79.845 79.956 2 0.017913 92804 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 38.634 31.945 7969900 0 0 0 0 0 2149600 895470 1423100 0 0 0 0 1365000 2136700 0 17312 2183 15766 145085;145086;145087;145088;145089 115630;115631;115632 115632 3 FTQAGSEVSALLGR Unmodified 1434.7467 0.74669243 823 P06576 ATP5B ATP synthase subunit beta, mitochondrial yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 77.829 77.974 2 1.6531E-05 89634 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 106.49 92.9 33206000 0 0 0 0 0 5121600 0 4371400 0 6903800 4164300 0 0 3758700 8886500 17313 823 15767 145090;145091;145092;145093;145094;145095;145096 115633;115634;115635;115636;115637 115634 4 FTQDTQPHYIYSPR Unmodified 1751.8267 0.82673367 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 1 1 1 1 1 2 2 2 2 2 2 48.566 48.818 2;3 1.9011E-08 53894 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.81 74.808 877800000 0 0 0 24876000 32300000 68740000 41503000 36148000 47384000 78880000 86281000 143300000 94142000 79579000 144660000 17314 2392 15768 145097;145098;145099;145100;145101;145102;145103;145104;145105;145106;145107;145108;145109;145110;145111;145112;145113;145114 115638;115639;115640;115641;115642;115643;115644;115645;115646;115647;115648;115649;115650;115651;115652;115653;115654;115655 115643 17 FTQEDEQLVQEK Unmodified 1492.7046 0.70455285 4816 Q9P2E3 ZNFX1 NFX1-type zinc finger-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 47.156 41.593 2 4.5292E-13 54314 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.94 111.18 20553000 0 20553000 0 0 0 0 0 0 0 0 0 0 0 0 0 17315 4816 15769 145115 115656 115656 1 FTQLDLEDVQVR Unmodified 1461.7464 0.74635808 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.359 78.416 2 2.9618E-43 90662 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 181.53 144.95 387580000 0 0 0 13109000 19370000 40142000 18719000 23443000 21908000 46226000 35841000 46642000 25310000 27007000 69859000 17316 4634 15770 145116;145117;145118;145119;145120;145121;145122;145123;145124;145125;145126;145127 115657;115658;115659;115660;115661;115662;115663;115664;115665;115666;115667;115668 115667 12 FTQLDLEDVQVREK Unmodified 1718.8839 0.88391419 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By matching 7.18 3.74 3 1 7 1 2 1 1 1 1 1 1 1 1 72.627 71.178 3 2.7243E-28 91582 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 139.86 119.62 293720000 58910000 79731000 40215000 0 0 0 11693000 0 11503000 18639000 19482000 22594000 13764000 17193000 0 17317 4634 15771 145128;145129;145130;145131;145132;145133;145134;145135;145136;145137;145138 115669;115670;115671;115672;115673;115674 115672 4 FTQNLSAFRR Unmodified 1238.652 0.65200419 4923 Q9UIA9 XPO7 Exportin-7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 46.844 47.027 3 0.0012122 51677 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.294 34.011 73353000 0 0 0 0 3290400 13676000 3909500 3671000 4425400 8021600 7973600 0 6236400 6181900 15967000 17318 4923 15772 145139;145140;145141;145142;145143;145144;145145;145146;145147;145148 115675;115676;115677;115678;115679;115680;115681;115682 115677 8 FTQQNYHDR Unmodified 1207.537 0.53703401 4263 Q9BZE4 GTPBP4 Nucleolar GTP-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 2 1 1 1 1 1 1 1 10.243 10.385 3 0.0080536 9082 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 54.608 44.084 89283000 0 0 0 4699700 3552800 6108900 4540000 5329000 4273400 6254500 8456200 12493000 10292000 11079000 12205000 17319 4263 15773 145149;145150;145151;145152;145153;145154;145155;145156;145157;145158;145159;145160;145161 115683;115684;115685;115686;115687;115688;115689;115690 115686 7 FTQSGTMK Unmodified 898.42185 0.42185282 1587 P49711 CTCF Transcriptional repressor CTCF no no 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 11.663 11.933 2 0.02509 10971 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 58.981 11.936 6657400 0 0 0 1771600 0 0 0 0 0 0 1072200 1807000 0 0 2006600 17320 1587 15774 145162;145163;145164;145165 115691 115691 1 FTQTNIGIIENK Unmodified 1376.73 0.72997974 3981 Q96S38 RPS6KC1 Ribosomal protein S6 kinase delta-1 yes yes 0 0 0 By MS/MS 2 0 1 1 67.303 61.387 2 0.047358 78609 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.474 30.702 25494000 0 25494000 0 0 0 0 0 0 0 0 0 0 0 0 0 17321 3981 15775 145166 115692 115692 0 FTQTSGETTDADKEPAGEDK Unmodified 2125.9288 0.92875171 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 24.009 19.963 3 2.3296E-08 26446 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.899 74.237 10730000 0 10730000 0 0 0 0 0 0 0 0 0 0 0 0 0 17322 1492 15776 145167;145168 115693;115694 115693 2 FTQVLEDDEK Unmodified 1222.5717 0.57174776 4633 Q9NTI5 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes yes 0 0 0 By MS/MS 2 0 1 1 44.818 39.497 2 9.5985E-06 51358 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 161.27 135.71 70228000 0 70228000 0 0 0 0 0 0 0 0 0 0 0 0 0 17323 4633 15777 145169 115695;115696 115695 2 FTRNEFNLESK Unmodified 1383.6783 0.67827852 2593 Q15907;P62491 RAB11B;RAB11A Ras-related protein Rab-11B;Ras-related protein Rab-11A yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 45.165 45.283 3 0.00019817 50866 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 93.839 66.868 1192700000 0 0 0 57475000 49495000 88151000 90935000 139450000 69688000 123810000 156680000 167640000 121810000 127610000 0 17324 2593 15778 145170;145171;145172;145173;145174;145175;145176;145177;145178;145179;145180 115697;115698;115699;115700;115701;115702;115703;115704;115705 115704 9 FTRPEHLGSSAK Unmodified 1328.6837 0.68369824 5060 Q9UPT9;A6NNY8 USP22;USP27X Ubiquitin carboxyl-terminal hydrolase 22;Ubiquitin carboxyl-terminal hydrolase 27 yes no 0 0 1 By MS/MS By matching By MS/MS By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 20.009 20.065 3 0.0059003 20845 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 48.527 29.902 66039000 0 0 0 0 8472300 9854000 12270000 0 11138000 14090000 0 0 0 10215000 0 17325 5060 15779 145181;145182;145183;145184;145185;145186 115706;115707;115708 115706 2 FTRPLTMAELSR Unmodified 1420.7497 0.74966932 3816 Q96EK9 KTI12 Protein KTI12 homolog yes yes 0 0 1 By MS/MS By matching By matching 10 0 3 1 1 1 62.289 62.503 3 0.015721 71609 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 39.006 24.319 12507000 0 0 0 0 0 4556500 0 2364600 0 0 0 5586400 0 0 0 17326 3816 15780 145187;145188;145189 115709 115709 1 FTRPLTMAELSR Oxidation (M) 1436.7446 0.74458394 3816 Q96EK9 KTI12 Protein KTI12 homolog yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 45.676 46.041 3 0.002001 51975 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 53.034 39.355 67426000 0 0 0 0 0 10686000 8284200 0 0 8959600 8773300 13514000 9707100 0 7501800 17327 3816 15780 145190;145191;145192;145193;145194;145195;145196 115710;115711;115712 115711 5343 3 FTSDTKPIINK Unmodified 1262.6871 0.68705229 3311 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.1 3.37 6 1 22 2 3 2 1 2 2 2 2 2 2 1 2 2 2 2 32.988 31.959 2;3 0.00018764 33889 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.332 62.074 888790000 115300000 91960000 41116000 27463000 34899000 45868000 52874000 56037000 37708000 69660000 46352000 88261000 60164000 46118000 75013000 17328 3311 15781 145197;145198;145199;145200;145201;145202;145203;145204;145205;145206;145207;145208;145209;145210;145211;145212;145213;145214;145215;145216;145217;145218;145219;145220;145221;145222;145223;145224;145225 115713;115714;115715;115716;115717;115718;115719;115720;115721;115722;115723;115724;115725;115726;115727;115728;115729;115730;115731;115732;115733 115730 17 FTSGAFLSPSVSVQECR Unmodified 1870.8883 0.88834765 1707 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By matching 10 0 7 1 1 1 1 1 1 1 76.538 76.605 2 0.0010012 88482 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.875 37.313 24436000 0 0 0 0 3275000 3685900 2322000 2390600 3850900 0 5205400 0 3706200 0 0 17329 1707 15782 145226;145227;145228;145229;145230;145231;145232 115734;115735 115734 2 FTSPADLDASGAGPGPK Unmodified 1586.7577 0.75765105 1696 P52735 VAV2 Guanine nucleotide exchange factor VAV2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 61.737 56.399 2 1.8318E-19 72203 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.69 89.125 150990000 0 150990000 0 0 0 0 0 0 0 0 0 0 0 0 0 17330 1696 15783 145233;145234 115736;115737;115738 115736 3 FTSQDASTPASSELNK Unmodified 1681.7795 0.7795087 4492 Q9HAW4 CLSPN Claspin yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.47 2 1 14 1 1 1 1 1 2 1 2 1 1 1 1 1 38.608 38.785 2 1.0959E-14 42166 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.902 89.487 114430000 0 0 0 7865000 7929500 6399100 7603300 10894000 6615500 11877000 10910000 13760000 9231500 9009900 12338000 17331 4492 15784 145235;145236;145237;145238;145239;145240;145241;145242;145243;145244;145245;145246;145247;145248;145249 115739;115740;115741;115742;115743;115744;115745;115746;115747;115748;115749 115744 11 FTSSPGEK Unmodified 851.4025 0.40249759 2978 Q6UW63 KDELC1 KDEL motif-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2.67 0.471 1 2 1 2 10.275 6.7865 2 0.025852 9368 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.809 45.956 81249000 111780 81137000 0 0 0 0 0 0 0 0 0 0 0 0 0 17332 2978 15785 145250;145251;145252 115750 115750 1 FTTDDSICVLGISK Unmodified 1554.76 0.75995923 2064 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 79.931 78.808 2 1.5593E-11 91603 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 121.02 98.38 292720000 20119000 156280000 7337300 1600000 5786200 11344000 3535500 4928400 10240000 11561000 11321000 14309000 7571600 9967300 16818000 17333 2064 15786 145253;145254;145255;145256;145257;145258;145259;145260;145261;145262;145263;145264;145265;145266;145267;145268 115751;115752;115753;115754;115755;115756;115757;115758;115759;115760;115761;115762;115763 115762 13 FTTGDAMSK Unmodified 956.42733 0.42733213 2363 Q14019 COTL1 Coactosin-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.326 23.53 2 0.0077155 24620 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 71.692 47.897 159170000 0 0 0 2112200 2015900 2861000 4180500 3621500 2187900 4355900 26071000 18654000 5204800 16387000 71513000 17334 2363 15787 145269;145270;145271;145272;145273;145274;145275;145276;145277;145278;145279;145280 115764;115765 115765 2 FTTGDAMSK Oxidation (M) 972.42225 0.42224675 2363 Q14019 COTL1 Coactosin-like protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.422 11.568 2 0.0027586 9512 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 87.639 74.651 60867000 0 0 0 1165400 1201600 2256400 2377500 2141600 1195100 0 8070400 10992000 3325700 5748700 22392000 17335 2363 15787 145281;145282;145283;145284;145285;145286;145287;145288;145289;145290;145291 115766;115767 115766 3849 2 FTTLEGLLK Unmodified 1020.5855 0.58554733 477 O75312 ZPR1 Zinc finger protein ZPR1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 6.12 3.89 3 1 4 1 2 1 1 1 1 1 84.041 81.797 2 0.0050719 94085 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.498 59.866 248950000 85437000 112770000 32119000 0 0 0 0 0 0 0 3067100 3292900 0 2582300 9682400 17336 477 15788 145292;145293;145294;145295;145296;145297;145298;145299 115768;115769;115770;115771;115772;115773 115769 6 FTTNANHVVFNGDGTK Unmodified 1720.8169 0.81689726 535 O75717 WDHD1 WD repeat and HMG-box DNA-binding protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 44.41 44.619 3 0.0034641 49930 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 27.7 20.972 97866000 0 0 0 8835400 0 0 15644000 0 0 15396000 17964000 0 11960000 8894700 19172000 17337 535 15789 145300;145301;145302;145303;145304;145305;145306 115774;115775;115776;115777;115778;115779 115777 6 FTTSDSCDR Unmodified 1087.424 0.42403766 2148 Q08117 AES Amino-terminal enhancer of split yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 11.819 11.968 2 0.0051133 11127 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 83.206 78.85 55072000 0 0 0 1853800 2640100 4988800 3605800 3291300 3374800 4478400 3094200 8270300 5566600 5947300 7961100 17338 2148 15790 145307;145308;145309;145310;145311;145312;145313;145314;145315;145316;145317;145318 115780;115781;115782;115783;115784;115785 115785 5 FTTSDSCDRIK Unmodified 1328.6031 0.60306466 2148 Q08117 AES Amino-terminal enhancer of split yes yes 0 0 1 By MS/MS 3 0 1 1 26.664 22.449 3 0.021178 27983 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 37.327 29.44 4921600 0 4921600 0 0 0 0 0 0 0 0 0 0 0 0 0 17339 2148 15791 145319 115786 115786 1 FTVAELK Unmodified 806.4538 0.45380487 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 53.195 53.396 2 0.023384 60847 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 88.029 45.029 1753600000 0 0 0 80448000 0 118380000 163060000 131280000 110320000 174250000 180210000 264280000 177770000 156410000 197210000 17340 2290 15792 145320;145321;145322;145323;145324;145325;145326;145327;145328;145329;145330 115787;115788;115789;115790;115791;115792;115793;115794;115795;115796;115797;115798;115799;115800;115801;115802 115791 16 FTVAESCDR Unmodified 1083.4655 0.46550855 2104 Q04726 TLE3 Transducin-like enhancer protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 28.447 28.757 2 0.0079891 31082 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 70.919 61.331 52401000 0 0 0 0 0 5726600 5614900 0 0 0 9850700 11914000 12322000 6973500 0 17341 2104 15793 145331;145332;145333;145334;145335;145336 115803;115804;115805;115806;115807;115808;115809;115810 115805 8 FTVAESCDRIK Unmodified 1324.6445 0.64453555 2104 Q04726 TLE3 Transducin-like enhancer protein 3 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 38.814 37.986 3 0.012214 42260 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 39.58 28.925 52459000 6208100 0 8797300 1853500 0 3971500 2802500 3147200 5556200 2995300 0 0 4671600 4531500 7924000 17342 2104 15794 145337;145338;145339;145340;145341;145342;145343;145344;145345;145346;145347 115811;115812;115813 115811 3 FTVDLPK Unmodified 818.4538 0.45380487 1902 P62495 ETF1 Eukaryotic peptide chain release factor subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.674 64.763 2 0.044016 73068 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.993 33.478 809680000 0 0 0 34173000 40120000 99896000 50719000 43795000 43429000 78394000 75729000 85176000 61081000 75230000 121930000 17343 1902 15795 145348;145349;145350;145351;145352;145353;145354;145355;145356;145357;145358;145359 115814 115814 1 FTVDQTQTPSLK Unmodified 1363.6983 0.69834526 456 O75122 CLASP2 CLIP-associating protein 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 54.723 54.946 2 2.8643E-05 62425 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 117.52 69.237 72799000 0 0 0 0 6642900 0 6579500 9534700 0 9025800 7951500 6657800 8067000 6239800 12100000 17344 456 15796 145360;145361;145362;145363;145364;145365;145366;145367;145368 115815;115816;115817;115818;115819 115817 5 FTVDTISAGQGDVMVFVEDPEGNK Unmodified 2554.1897 0.1897342 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 93.198 88.488 3 5.1072E-05 111673 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.185 35.469 25074000 21244000 0 3830000 0 0 0 0 0 0 0 0 0 0 0 0 17345 487 15797 145369;145370;145371 115820;115821;115822;115823 115822 4 FTVDTISAGQGDVMVFVEDPEGNKEEAQVTPDSDK Unmodified 3753.7203 0.72034543 487 O75369 FLNB Filamin-B yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 91.138 85.303 3 1.6948E-22 108796 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.472 66.416 16507000 16507000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17346 487 15798 145372;145373 115824;115825 115825 2 FTVETRGAGTGGLGLAVEGPSEAK Unmodified 2303.1757 0.17573912 1124 P21333 FLNA Filamin-A yes yes 0 0 1 By MS/MS By MS/MS 2.67 0.471 1 2 2 1 77.853 72.683 3 6.7058E-20 94218 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 99.6 84.359 176700000 171190000 5508300 0 0 0 0 0 0 0 0 0 0 0 0 0 17347 1124 15799 145374;145375;145376 115826;115827;115828;115829;115830;115831;115832 115831 7 FTVISVPHLPEK Unmodified 1365.7656 0.76563696 3557 Q8WV41 SNX33 Sorting nexin-33 yes yes 0 0 0 By MS/MS 2 0 1 1 84.492 76.362 3 0.0079093 99696 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.875 43.57 16807000 16807000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17348 3557 15800 145377 115833 115833 1 FTVIYNEQMASK Oxidation (M) 1445.6861 0.68606601 4450 Q9H8H3 METTL7A Methyltransferase-like protein 7A yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 2 1 1 2 1 1 1 53.285 53.183 2 0.00049858 59937 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 74.944 58.806 110820000 0 0 0 10546000 18769000 10416000 11080000 19509000 13429000 27069000 0 0 0 0 0 17349 4450 15801 145378;145379;145380;145381;145382;145383;145384;145385;145386;145387 115834;115835;115836;115837;115838 115835 5890 4 FTVIYNEQMASK Unmodified 1429.6912 0.69115139 4450 Q9H8H3 METTL7A Methyltransferase-like protein 7A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 63.773 63.851 2 0.00083838 73089 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 73.781 56.308 22167000 0 0 0 0 2717900 0 2640700 6327700 0 5744700 0 4735800 0 0 0 17350 4450 15801 145388;145389;145390;145391;145392;145393;145394;145395 115839;115840;115841;115842;115843;115844;115845;115846;115847 115839 9 FTVLFPSGTPLPAR Unmodified 1501.8293 0.82929985 2175 Q0VDF9 HSPA14 Heat shock 70 kDa protein 14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 87.674 87.803 2 4.0186E-14 101680 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 116.23 99.208 18189000 0 0 0 0 0 1940800 0 839400 0 1942000 1528200 2487300 717330 1400400 7333200 17351 2175 15802 145396;145397;145398;145399;145400;145401;145402;145403 115848;115849;115850;115851;115852 115849 5 FTVLLMPNGPMR 2 Oxidation (M) 1406.705 0.70502731 5067 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 73.56 73.854 2 8.9034E-05 85123 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 83.005 64.694 28715000 0 0 0 0 0 0 0 0 0 0 7746100 7677600 0 0 13292000 17352 5067 15803 145404;145405;145406;145407 115853;115854;115855;115856 115854 6433;6434 4 FTVLLMPNGPMR Oxidation (M) 1390.7101 0.71011269 5067 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 yes yes 0 1 0 By matching By MS/MS 10 0 2 1 1 79.382 79.583 2 0.00027824 91657 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.219 56.696 11285000 0 0 0 0 0 0 0 0 0 0 0 5707100 0 0 5577800 17353 5067 15803 145408;145409 115857;115858 115858 6433;6434 2 FTVLLMPNGPMR Unmodified 1374.7152 0.71519807 5067 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 yes yes 0 0 0 By MS/MS 10 0 1 1 86.469 86.628 2 4.1957E-05 100151 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.47 96.942 10986000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10986000 17354 5067 15803 145410 115859;115860 115860 2 FTVNLSGCPR Unmodified 1149.5601 0.56007764 4143 Q9BTE3 MCMBP Mini-chromosome maintenance complex-binding protein yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 58.504 58.877 2 0.010434 66339 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.013 27.287 21711000 0 0 0 0 0 0 0 0 0 3125400 4164400 3340600 0 3478900 7601900 17355 4143 15804 145411;145412;145413;145414;145415 115861;115862 115862 2 FTVPMLK Oxidation (M) 850.46226 0.46226107 973 P12956 XRCC6 X-ray repair cross-complementing protein 6 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.96 2.69 3 20 1 1 1 1 2 1 2 2 2 1 2 1 2 2 2 67.123 66.48 2 0.028936 76607 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 67.035 50.48 1156600000 278750000 241640000 49886000 18868000 39365000 33992000 52238000 39802000 39565000 33172000 75456000 43941000 59893000 61172000 88884000 17356 973 15805 145416;145417;145418;145419;145420;145421;145422;145423;145424;145425;145426;145427;145428;145429;145430;145431;145432;145433;145434;145435;145436;145437;145438 115863;115864;115865;115866;115867;115868;115869;115870;115871;115872;115873;115874;115875;115876;115877;115878;115879;115880 115869 18 FTVPMLK Unmodified 834.46735 0.46734645 973 P12956 XRCC6 X-ray repair cross-complementing protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 77.13 75.801 2 0.026085 86672 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 79.454 54.455 1440800000 573980000 444320000 47453000 0 19167000 33003000 0 33899000 23424000 37705000 0 54848000 0 48453000 124540000 17357 973 15805 145439;145440;145441;145442;145443;145444;145445;145446;145447;145448;145449 115881;115882;115883;115884;115885;115886 115885 6 FTVQMPTSQSPAVK Oxidation (M) 1535.7654 0.76537896 2616 Q16594 TAF9 Transcription initiation factor TFIID subunit 9 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 48.052 48.273 2 4.6357E-19 54062 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 127.51 105.28 54255000 0 0 0 0 4288600 3284200 6424900 4446200 5107300 5569000 6007700 10180000 0 0 8946400 17358 2616 15806 145450;145451;145452;145453;145454;145455;145456;145457;145458;145459 115887;115888;115889;115890;115891;115892;115893;115894;115895;115896 115895 4271 9 FTVQMPTSQSPAVK Unmodified 1519.7705 0.77046434 2616 Q16594 TAF9 Transcription initiation factor TFIID subunit 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 67.332 67.501 2 2.7805E-05 77396 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 94.616 67.943 61076000 0 0 0 0 4416800 0 6050800 5758200 2609200 5835100 6633100 9486500 6130600 4370900 9784900 17359 2616 15806 145460;145461;145462;145463;145464;145465;145466;145467;145468;145469;145470 115897;115898;115899;115900;115901;115902;115903;115904;115905 115901 9 FTVTTGHYTIK Unmodified 1266.6608 0.66083754 1543 P48553 TRAPPC10 Trafficking protein particle complex subunit 10 yes yes 0 0 0 By MS/MS 2 0 1 1 56.534 52.682 3 0.024417 65956 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 41.54 30.007 1874500 0 0 1874500 0 0 0 0 0 0 0 0 0 0 0 0 17360 1543 15807 145471 115906 115906 1 FTVVVLR Unmodified 832.51707 0.51707383 1522 P47712 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.955 71.029 2 0.024196 80610 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.287 46.7 308950000 0 0 0 12778000 15211000 23585000 23155000 21282000 19827000 33791000 25831000 36091000 24897000 22740000 49762000 17361 1522 15808 145472;145473;145474;145475;145476;145477;145478;145479;145480;145481;145482;145483 115907;115908;115909;115910;115911;115912;115913;115914 115909 8 FTYGPSFPAFK Unmodified 1260.6179 0.61791009 3187 Q86X10 RALGAPB Ral GTPase-activating protein subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 81.366 81.404 2 0.011889 94125 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 48.091 29.309 17302000 0 0 0 0 2060100 3602300 0 3823200 0 0 0 0 0 0 7816500 17362 3187 15809 145484;145485;145486;145487 115915 115915 1 FVADGIFK Unmodified 895.48035 0.48035398 1156 P23396 RPS3 40S ribosomal protein S3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.39 3.7 5 1 12 2 2 2 1 1 1 1 1 1 1 1 1 1 1 1 69.456 67.672 2 0.0125 80897 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.375 80.57 2591100000 23059000 161800000 632200000 79423000 106480000 111550000 88071000 106820000 79374000 144950000 165610000 204510000 197350000 202310000 287610000 17363 1156 15810 145488;145489;145490;145491;145492;145493;145494;145495;145496;145497;145498;145499;145500;145501;145502;145503;145504;145505 115916;115917;115918;115919;115920;115921;115922;115923;115924;115925;115926;115927;115928;115929 115918 14 FVAEGGPELEK Unmodified 1174.587 0.58700389 3251 Q8IWZ8 SUGP1 SURP and G-patch domain-containing protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 45.191 45.297 2 0.0022576 50819 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 82.287 70.518 159390000 0 0 0 9969800 10851000 15741000 17276000 12861000 11221000 18913000 22434000 26379000 13748000 0 0 17364 3251 15811 145506;145507;145508;145509;145510;145511;145512;145513;145514;145515;145516 115930;115931;115932;115933;115934;115935;115936;115937 115932 8 FVAESAEVLLPR Unmodified 1329.7293 0.72925145 2285 Q13421 MSLN Mesothelin;Megakaryocyte-potentiating factor;Mesothelin, cleaved form yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 79.052 79.224 2 0.020972 91828 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 55.084 40.947 13014000 0 0 0 0 0 0 0 0 0 0 0 13014000 0 0 0 17365 2285 15812 145517;145518 115938;115939 115938 1 FVAFSGEGQSLR Unmodified 1296.6463 0.64625011 3681 Q92890 UFD1L Ubiquitin fusion degradation protein 1 homolog yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 62.007 62.213 2 0.0091321 71058 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 48.091 39.559 18345000 0 0 0 0 1441400 0 2814900 0 0 0 5009400 3767600 0 0 5312000 17366 3681 15813 145519;145520;145521;145522;145523 115940;115941;115942 115941 3 FVAFSGEGQSLRK Unmodified 1424.7412 0.74121312 3681 Q92890 UFD1L Ubiquitin fusion degradation protein 1 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 49.695 49.826 3 0.00020534 55452 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 61.212 36.358 174020000 0 0 0 12879000 10557000 13371000 14116000 15865000 11226000 17706000 0 24789000 11767000 11433000 30315000 17367 3681 15814 145524;145525;145526;145527;145528;145529;145530;145531;145532;145533;145534 115943;115944;115945;115946;115947;115948;115949 115948 7 FVALASNEK Unmodified 977.5182 0.51819605 138 O00273 DFFA DNA fragmentation factor subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 41.005 35.981 2 0.0010352 44781 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 141.39 99.887 570490000 51582000 511270000 7640000 0 0 0 0 0 0 0 0 0 0 0 0 17368 138 15815 145535;145536;145537;145538 115950;115951;115952 115951 3 FVALENISCK Unmodified 1179.5958 0.59579444 3476 Q8TAT6 NPLOC4 Nuclear protein localization protein 4 homolog yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 6 4 2 2 1 1 1 1 65.092 62.841 2 0.021799 71368 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 46.457 28.989 207750000 0 187020000 6808900 0 0 0 0 0 0 6935600 0 6984600 0 0 0 17369 3476 15816 145539;145540;145541;145542 115953;115954;115955 115955 2 FVAPEEVLPFTEGDILEK Unmodified 2032.0405 0.040474416 1598 P49770 EIF2B2 Translation initiation factor eIF-2B subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 94.196 94.348 2 0.0026619 109701 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 55.452 49.846 6931400 0 0 0 0 0 0 0 0 0 1904600 1317500 0 0 0 3709300 17370 1598 15817 145543;145544;145545 115956;115957 115957 2 FVAPFNEVIEQMK Oxidation (M) 1566.7752 0.77521537 3104 Q7Z569 BRAP BRCA1-associated protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 85.792 80.676 2 0.010963 102643 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.174 40.456 32501000 4742800 23625000 4133300 0 0 0 0 0 0 0 0 0 0 0 0 17371 3104 15818 145546;145547;145548 115958;115959;115960;115961 115959 4715 4 FVAPFNEVIEQMK Unmodified 1550.7803 0.78030075 3104 Q7Z569 BRAP BRCA1-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 4 1 2 1 93.313 89.459 2 2.3265E-08 113477 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.38 89.511 67210000 8239600 56709000 2261600 0 0 0 0 0 0 0 0 0 0 0 0 17372 3104 15818 145549;145550;145551;145552 115962;115963 115963 2 FVAVLGGNIK Unmodified 1016.6019 0.6018661 37;3836 A8MPP1;Q92771;Q96FC9 DDX11L8;DDX12P;DDX11 Putative ATP-dependent RNA helicase DDX11-like protein 8;Putative ATP-dependent RNA helicase DDX12;Probable ATP-dependent RNA helicase DDX11 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.86 2.8 1 6 1 1 1 1 1 1 1 69.703 68.55 2 0.0089012 79162 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 58.917 27.614 23465000 8065200 0 0 0 2849000 2637700 1509300 2597000 0 3025400 0 0 2781600 0 0 17373 37;3836 15819 145553;145554;145555;145556;145557;145558;145559 115964;115965;115966;115967;115968 115968 5 FVCPECSK Unmodified 1025.431 0.4310373 2076 Q02447 SP3 Transcription factor Sp3 yes yes 0 0 0 By MS/MS 2 0 1 1 27.361 23.056 2 0.017225 30326 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.777 79.708 20589000 0 20589000 0 0 0 0 0 0 0 0 0 0 0 0 0 17374 2076 15820 145560 115969 115969 1 FVCPGINVK Unmodified 1032.5426 0.54263666 4961 Q9UKD1 GMEB2 Glucocorticoid modulatory element-binding protein 2 no no 0 0 0 By MS/MS 2 0 1 1 63.579 55.307 2 0.026988 74507 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.176 53.534 38711000 38711000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17375 4961 15821 145561 115970 115970 1 FVCSPDEVMDTIDEGK Oxidation (M) 1856.7808 0.78083061 1328 P33176 KIF5B Kinesin-1 heavy chain yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 2 1 1 1 1 1 1 3 1 2 1 1 65.414 65.47 2 1.1163E-15 75237 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 103.88 97.439 74790000 0 0 0 6198300 5758200 5380500 5930400 4271100 5247000 4939400 9818900 9032200 6439600 6561400 5213300 17376 1328 15822 145562;145563;145564;145565;145566;145567;145568;145569;145570;145571;145572;145573;145574;145575;145576;145577 115971;115972;115973;115974;115975;115976;115977;115978;115979;115980;115981;115982;115983;115984 115971 1976 14 FVCSPDEVMDTIDEGK Unmodified 1840.7859 0.78591599 1328 P33176 KIF5B Kinesin-1 heavy chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 79.838 79.539 2 3.0652E-27 92112 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 126.1 111.94 111460000 0 26741000 0 0 5078000 5923100 2990500 7736800 4260600 6452200 11130000 9955600 4284100 7221300 19687000 17377 1328 15822 145578;145579;145580;145581;145582;145583;145584;145585;145586;145587;145588;145589 115985;115986;115987;115988;115989;115990;115991;115992;115993;115994;115995;115996;115997 115992 13 FVDEEDGGDGQAGPDEGEVDSCLR Unmodified 2552.0245 0.024519369 289 O15511 ARPC5 Actin-related protein 2/3 complex subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 1 2 2 2 2 2 58.956 59.065 2;3 3.146E-114 66685 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 177.74 173.03 163430000 0 0 0 10952000 12326000 12692000 8284800 7844100 9981400 6901000 15200000 30450000 9604300 12376000 26815000 17378 289 15823 145590;145591;145592;145593;145594;145595;145596;145597;145598;145599;145600;145601;145602;145603;145604;145605;145606;145607;145608;145609;145610;145611;145612 115998;115999;116000;116001;116002;116003;116004;116005;116006;116007;116008;116009;116010;116011;116012;116013 116003 16 FVDEQEEAAAAAAEPGPDPSEVDGLLR Unmodified 2782.2933 0.29334765 4080 Q9BPX5 ARPC5L Actin-related protein 2/3 complex subunit 5-like protein yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 83.824 83.97 3 0.013817 97266 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 19.535 16.855 19309000 0 0 0 0 0 0 0 0 0 7314000 0 0 0 0 11995000 17379 4080 15824 145613;145614 116014 116014 1 FVDFNDPNFGDELK Unmodified 1655.7468 0.74675201 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.502 82.563 2 3.9486E-05 95260 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 106.67 89.725 135410000 0 0 0 3355000 9050800 9960300 6488500 11677000 8684800 14826000 11469000 14171000 9217100 12967000 23539000 17380 5189 15825 145615;145616;145617;145618;145619;145620;145621;145622;145623;145624;145625;145626 116015;116016;116017;116018;116019;116020;116021;116022;116023;116024;116025;116026;116027 116019 13 FVDGEWYR Unmodified 1070.4821 0.48214489 3039 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.655 58.777 2 0.0099306 66739 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 81.297 69.576 131090000 0 0 0 7090500 5783900 0 6209600 6768700 5006700 13156000 13170000 14574000 8668700 12480000 38180000 17381 3039 15826 145627;145628;145629;145630;145631;145632;145633;145634;145635;145636;145637;145638 116028;116029;116030;116031;116032;116033;116034;116035;116036 116032 9 FVDGVSTVAR Unmodified 1049.5506 0.55055881 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 44.142 43.54 2 0.0015063 48273 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 90.64 46.524 537580000 0 54855000 0 19959000 23859000 43831000 31504000 32095000 26282000 45045000 46810000 62660000 39662000 41826000 69192000 17382 643 15827 145639;145640;145641;145642;145643;145644;145645;145646;145647;145648;145649;145650;145651;145652 116037;116038;116039;116040;116041;116042;116043;116044;116045;116046;116047;116048;116049;116050;116051;116052 116050 15 FVDILGLR Unmodified 931.5491 0.54910224 3600 Q8WYA6 CTNNBL1 Beta-catenin-like protein 1 yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 84.216 84.322 2 0.015415 97257 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.915 45.391 9324100 0 0 0 0 0 2922400 0 0 0 2537600 0 0 0 0 3864000 17383 3600 15828 145653;145654;145655 116053 116053 1 FVDIPQLGVSDK Unmodified 1316.6976 0.69761697 2708 Q53SF7 COBLL1 Cordon-bleu protein-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.093 79.134 2 0.0059635 90620 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 64.82 47.001 157960000 0 0 0 7397800 11210000 12822000 11908000 14267000 11206000 19928000 19479000 21988000 13711000 14042000 0 17384 2708 15829 145656;145657;145658;145659;145660;145661;145662;145663;145664;145665;145666 116054;116055;116056;116057 116056 4 FVDLYGAQK Unmodified 1039.5338 0.53384611 1426 P40939 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 52.426 52.629 2 0.01167 60569 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 62.464 39.535 39564000 0 0 0 3308300 0 4023500 3368800 3402500 1780200 5100000 5042300 4748100 3619200 0 5170900 17385 1426 15830 145667;145668;145669;145670;145671;145672;145673;145674;145675;145676 116058;116059;116060;116061;116062;116063;116064 116064 7 FVDPSAALDLLK Unmodified 1287.7075 0.70745338 3978 Q96RU2 USP28 Ubiquitin carboxyl-terminal hydrolase 28 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.7 3.52 2 1 7 2 1 1 1 1 1 1 1 1 92.669 91.707 2 4.0265E-15 113633 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 147.95 139.41 153850000 0 141160000 1915900 0 0 0 835840 675720 0 2279300 0 1097500 918930 1275000 3696600 17386 3978 15831 145677;145678;145679;145680;145681;145682;145683;145684;145685;145686 116065;116066;116067;116068;116069;116070;116071;116072;116073;116074;116075;116076;116077;116078;116079;116080;116081 116070 17 FVDRVANPK Unmodified 1044.5716 0.5716286 1614 P49959 MRE11A Double-strand break repair protein MRE11A yes yes 0 0 1 By MS/MS 2 0 1 1 28.319 22.8 2 0.0041674 32279 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 160.26 129.76 152290000 152290000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17387 1614 15832 145687 116082 116082 0 FVDSEQRDLALQR Unmodified 1575.8005 0.80051892 4424 Q9H6T0 ESRP2 Epithelial splicing regulatory protein 2 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.226 46.394 3 0.0021834 52184 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 54.7 39.669 124110000 0 0 0 9742000 7505100 8042300 9884300 15637000 0 13488000 14611000 13702000 8513100 11515000 11466000 17388 4424 15833 145688;145689;145690;145691;145692;145693;145694;145695;145696;145697;145698;145699 116083;116084;116085;116086;116087;116088;116089;116090 116083 8 FVDSGEMAESFPYR Oxidation (M) 1649.7032 0.70317264 2171 Q09472 EP300 Histone acetyltransferase p300 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.229 62.326 2 4.6063E-14 71365 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 114.83 10.311 88299000 0 0 0 5252000 5720100 6915600 7296800 7275400 5314400 5995200 9503100 12496000 7189100 6470500 8871000 17389 2171 15834 145700;145701;145702;145703;145704;145705;145706;145707;145708;145709;145710;145711 116091;116092;116093;116094;116095;116096;116097;116098;116099;116100;116101;116102;116103;116104;116105;116106;116107;116108 116093 3494 18 FVDSGEMAESFPYR Unmodified 1633.7083 0.70825802 2171 Q09472 EP300 Histone acetyltransferase p300 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.965 75.024 2 9.2178E-12 86091 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 122.51 117.2 79747000 0 0 0 2922100 3091800 6283400 3582800 6731300 4531000 8075600 6244100 10354000 6235500 6572500 15123000 17390 2171 15834 145712;145713;145714;145715;145716;145717;145718;145719;145720;145721;145722;145723 116109;116110;116111;116112;116113;116114;116115;116116;116117;116118;116119;116120;116121 116113 13 FVDSGEMSESFPYR Oxidation (M) 1665.6981 0.69808726 3662 Q92793 CREBBP CREB-binding protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.673 59.783 2 9.47E-13 68499 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 105.86 100.97 47389000 0 0 0 4201600 4055600 4349500 3663900 2761500 2708000 4305000 5820300 4721800 4292000 2399900 4109800 17391 3662 15835 145724;145725;145726;145727;145728;145729;145730;145731;145732;145733;145734;145735 116122;116123;116124;116125;116126;116127;116128;116129;116130;116131;116132 116132 5182 9 FVDSGEMSESFPYR Unmodified 1649.7032 0.70317264 3662 Q92793 CREBBP CREB-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 65.499 65.685 2 0.00021878 71462 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 80.763 1.1044 22222000 0 0 0 0 0 6915600 0 0 0 0 0 0 7189100 0 8117200 17392 3662 15835 145736;145737;145738;145739 116133;116134;116135;116136 116136 3 FVDTDIWNQYLEYQQSLLNESDGK Unmodified 2904.3454 0.34538322 4465 Q9H993 ARMT1 Protein-glutamate O-methyltransferase yes yes 0 0 0 By MS/MS 2 0 1 1 98.762 90.632 3 6.4268E-08 116920 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.656 64.463 13295000 13295000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17393 4465 15836 145740 116137 116137 1 FVEDDNYK Unmodified 1028.4451 0.44509068 3188 Q86X27 RALGPS2 Ras-specific guanine nucleotide-releasing factor RalGPS2 no no 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 27.809 23.504 2 0.026252 30825 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.469 64.954 37201000 0 37201000 0 0 0 0 0 0 0 0 0 0 0 0 0 17394 3188 15837 145741;145742 116138;116139 116139 2 FVEEQHTK Unmodified 1016.4927 0.49270958 3732 Q96A49 SYAP1 Synapse-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 7.7629 7.0101 2 0.0048222 5324 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 113.89 90.365 730380000 37234000 299650000 52070000 18475000 13129000 22164000 20247000 0 25317000 28078000 70481000 36417000 29389000 23308000 54424000 17395 3732 15838 145743;145744;145745;145746;145747;145748;145749;145750;145751;145752;145753;145754;145755;145756;145757 116140;116141;116142;116143;116144;116145;116146;116147;116148;116149;116150;116151;116152;116153 116152 13 FVEEQNLK Unmodified 1005.5131 0.51311067 2640 Q16875 PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 30.542 30.719 2 0.011082 33315 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 77.741 19.573 69932000 0 0 0 6525600 5515100 5097700 6838700 5468800 4930000 6790400 7196600 7849400 5379100 0 8340400 17396 2640 15839 145758;145759;145760;145761;145762;145763;145764;145765;145766;145767;145768 116154;116155;116156;116157;116158;116159;116160 116155 7 FVEGAREVEMDAVGK Unmodified 1635.7927 0.79265635 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 0 1 By MS/MS 2.33 0.471 2 1 3 60.654 55.131 2;3 0.0061105 71108 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 32.285 19.73 114980000 0 114980000 0 0 0 0 0 0 0 0 0 0 0 0 0 17397 1300 15840 145769;145770;145771 116161;116162;116163 116161 2 FVEGAREVEMDAVGK Oxidation (M) 1651.7876 0.78757097 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 51.819 46.963 3 0.0040363 58642 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 54.09 49.199 131660000 0 45266000 86395000 0 0 0 0 0 0 0 0 0 0 0 0 17398 1300 15840 145772;145773 116164 116164 1918 1 FVEGLLK Unmodified 804.47454 0.47454032 3017;2889 Q6ZUT9;Q6IQ26 DENND5B;DENND5A DENN domain-containing protein 5B;DENN domain-containing protein 5A no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 60.247 60.099 2 0.033465 67543 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 71.949 29.176 121740000 0 0 17041000 0 6709000 9499900 8345700 9554200 7403000 11309000 10953000 11872000 9137800 8668300 11243000 17399 3017;2889 15841 145774;145775;145776;145777;145778;145779;145780;145781;145782;145783;145784;145785 116165;116166;116167;116168;116169 116168 5 FVEGLPINDFSR Unmodified 1392.7038 0.70376498 1422 P40925 MDH1 Malate dehydrogenase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.39 3.7 5 1 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 82.888 81.896 2 1.4066E-13 101813 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 132.78 83.361 835890000 9242500 142530000 8074100 7437500 6941400 11942000 9910700 8785500 6234400 15981000 102710000 88357000 7862400 68077000 341810000 17400 1422 15842 145786;145787;145788;145789;145790;145791;145792;145793;145794;145795;145796;145797;145798;145799;145800;145801;145802;145803 116170;116171;116172;116173;116174;116175;116176;116177;116178;116179;116180;116181;116182;116183;116184;116185;116186;116187 116173 18 FVEGLPINDFSREK Unmodified 1649.8413 0.8413211 1422 P40925 MDH1 Malate dehydrogenase, cytoplasmic yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 6 2 4 3 1 80.844 75.307 3 0.00039449 91816 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 70.438 63.068 2914200000 548400000 1515800000 849970000 0 0 0 0 0 0 0 0 0 0 0 0 17401 1422 15843 145804;145805;145806;145807;145808;145809;145810;145811 116188;116189;116190;116191;116192;116193;116194;116195;116196 116191 9 FVELPGAEMGK Oxidation (M) 1192.5798 0.57981002 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.4 3.68 4 1 10 1 3 1 1 1 1 1 1 1 1 1 1 1 56.643 54.815 2 0.0017107 63322 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 66.962 61.976 725340000 35421000 265620000 38661000 25045000 20088000 41900000 33833000 0 27568000 40390000 54113000 55479000 0 37181000 50048000 17402 848 15844 145812;145813;145814;145815;145816;145817;145818;145819;145820;145821;145822;145823;145824;145825;145826 116197;116198;116199;116200;116201;116202;116203;116204;116205;116206;116207;116208;116209;116210;116211;116212 116212 1054 16 FVELPGAEMGK Unmodified 1176.5849 0.5848954 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69.013 67.974 2 3.6108E-05 78321 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 117.31 117.31 2819400000 64037000 2045400000 26771000 25054000 27167000 52243000 36100000 44221000 26178000 60626000 72783000 83183000 41196000 66866000 147590000 17403 848 15844 145827;145828;145829;145830;145831;145832;145833;145834;145835;145836;145837;145838;145839;145840;145841 116213;116214;116215;116216;116217;116218;116219;116220;116221;116222;116223;116224;116225;116226;116227;116228;116229;116230;116231;116232 116229 18 FVEQQSYK Unmodified 1027.4975 0.4974606 4030 Q99590 SCAF11 Protein SCAF11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 22.21 21.707 2 0.0056222 21773 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 106.14 93.609 137220000 0 22409000 0 4900100 8382100 8512500 9237400 0 8229100 0 15691000 15470000 10469000 11750000 22170000 17404 4030 15845 145842;145843;145844;145845;145846;145847;145848;145849;145850;145851;145852;145853 116233;116234;116235;116236;116237;116238;116239;116240;116241;116242;116243;116244;116245 116238 12 FVESDADEELLFNIPFTGNVK Unmodified 2383.1584 0.15835772 4298 Q9GZP4 PITHD1 PITH domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 98.529 93.878 2;3 1.8477E-17 116808 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 137.21 124.65 40934000 12784000 25009000 3141300 0 0 0 0 0 0 0 0 0 0 0 0 17405 4298 15846 145854;145855;145856;145857 116246;116247;116248 116247 3 FVESILSNNTTDDHCQEFVNQK Unmodified 2624.1813 0.18129478 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 72.01 70.84 3 3.6472E-61 90792 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 134.9 127.1 505230000 23668000 206030000 82935000 4411800 6253000 20091000 7398800 12229000 9411600 18041000 20807000 25049000 13051000 17391000 38461000 17406 3119 15847 145858;145859;145860;145861;145862;145863;145864;145865;145866;145867;145868;145869;145870;145871;145872;145873 116249;116250;116251;116252;116253;116254;116255;116256;116257;116258;116259;116260 116252 12 FVETPGQK Unmodified 904.46543 0.46543219 811 P05455 SSB Lupus La protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 22.05 21.001 2 0.0024541 27456 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 124.34 101.41 3267100000 167360000 2503300000 41966000 26729000 17495000 22357000 20557000 25965000 19697000 40067000 67049000 69113000 51782000 66182000 127500000 17407 811 15848 145874;145875;145876;145877;145878;145879;145880;145881;145882;145883;145884;145885;145886;145887;145888;145889;145890 116261;116262;116263;116264;116265;116266;116267;116268;116269;116270;116271;116272;116273;116274;116275;116276;116277 116269 14 FVEWTRLDMMDEEEVEVSLPR Unmodified 2609.2142 0.21417482 1344 P35237 SERPINB6 Serpin B6 yes yes 0 0 1 By MS/MS 3 0 1 1 94.333 90.827 3 0.039951 93611 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 23.447 19.785 1033900 1033900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17408 1344 15849 145891 116278 116278 1 FVFDRPLPVSR Unmodified 1331.735 0.73500553 1193 P25786 PSMA1 Proteasome subunit alpha type-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 72.135 72.206 2;3 0.0042344 83010 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 44.612 28.747 790120000 0 0 0 44937000 12734000 67256000 26200000 50618000 38081000 35422000 62315000 82057000 40338000 69102000 261060000 17409 1193 15850 145892;145893;145894;145895;145896;145897;145898;145899;145900;145901;145902;145903;145904;145905;145906;145907;145908;145909;145910;145911;145912;145913;145914;145915 116279;116280;116281;116282;116283;116284;116285;116286;116287 116280 8 FVFEWDASEDTSIDYNPLYK Unmodified 2438.0954 0.095423113 4168 Q9BUQ8 DDX23 Probable ATP-dependent RNA helicase DDX23 yes yes 0 0 0 By MS/MS 3 0 1 1 96.394 92.89 3 0.042756 96097 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 14.614 13.3 448100 448100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17410 4168 15851 145916 116288 116288 1 FVFGQNMSER Unmodified 1213.555 0.55499226 4428 Q9H6Z4 RANBP3 Ran-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 58.652 59.036 2 0.0011859 67221 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 108.98 98.267 122730000 0 0 0 0 0 0 0 0 0 0 23334000 21652000 18729000 24403000 34612000 17411 4428 15852 145917;145918;145919;145920;145921;145922 116289;116290;116291;116292;116293 116290 5 FVFGSESVK Unmodified 998.5073 0.50729701 1601;32 P49792;P0DJD0;P0DJD1;A6NKT7;Q7Z3J3 RANBP2;RGPD1;RGPD2;RGPD3;RGPD4 E3 SUMO-protein ligase RanBP2;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RanBP2-like and GRIP domain-containing protein 3;RanBP2-like and GRIP domain-containing protein 4 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 58.463 56.802 2 0.0099839 65553 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 65.156 51.16 252500000 48976000 78028000 33599000 8198200 5908600 12511000 13206000 8887300 8172700 17241000 0 0 17775000 0 0 17412 1601;32 15853 145923;145924;145925;145926;145927;145928;145929;145930;145931;145932;145933 116294;116295;116296;116297;116298;116299;116300 116300 7 FVGDADLER Unmodified 1020.4876 0.4876242 426 O60716 CTNND1 Catenin delta-1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 41.835 42.009 2 0.016214 46618 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 56.729 36.071 98247000 0 0 0 0 8782500 9510100 8745800 0 7658300 15613000 13998000 21719000 0 12220000 0 17413 426 15854 145934;145935;145936;145937;145938;145939;145940;145941 116301;116302;116303;116304 116303 4 FVGDADLERQK Unmodified 1276.6412 0.64116473 426 O60716 CTNND1 Catenin delta-1 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 34.246 34.38 3 0.005673 37369 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 53.013 27.717 14573000 0 0 0 0 1390800 2827000 0 0 0 0 4411600 0 2276700 3666600 0 17414 426 15855 145942;145943;145944;145945;145946 116305;116306 116306 2 FVGEGGVRMSETCVQVHR Unmodified 2046.9728 0.97276275 1764 P55259 GP2 Pancreatic secretory granule membrane major glycoprotein GP2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 2 1 1 2 2 1 2 58.336 58.719 3 0.00082606 61356 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 53.828 43.547 109690000 0 0 0 0 0 0 0 5742300 7120300 0 28389000 20666000 0 7716300 40061000 17415 1764 15856 145947;145948;145949;145950;145951;145952;145953;145954;145955;145956;145957;145958 116307;116308;116309;116310;116311;116312;116313;116314;116315;116316 116315 9 FVGGGVTSAGLVQEEIR Unmodified 1717.8999 0.89989861 3179 Q86W56 PARG Poly(ADP-ribose) glycohydrolase yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 76.575 76.82 2 0.012702 87703 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.195 24.007 189290000 0 0 0 0 0 0 0 0 0 0 0 89770000 0 0 99520000 17416 3179 15857 145959;145960 116317;116318 116317 2 FVGHGLQK Unmodified 884.48684 0.48683634 2691 Q504Q3 PAN2 PAB-dependent poly(A)-specific ribonuclease subunit PAN2 yes yes 0 0 0 By MS/MS 2 0 1 1 23.041 18.145 2 0.043064 25946 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.383 46.347 8158800 8158800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17417 2691 15858 145961 116319 116319 1 FVGIKDEDQLEAFLK Unmodified 1750.9142 0.91415169 4060 Q99757 TXN2 Thioredoxin, mitochondrial yes yes 0 0 1 By MS/MS 2 0 1 1 91.701 83.571 3 3.6984E-05 108456 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.439 81.238 10983000 10983000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17418 4060 15859 145962 116320;116321 116321 2 FVGNIYTLK Unmodified 1053.5859 0.58588168 690 O95785 WIZ Protein Wiz yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68.333 67.296 2 0.0087066 76993 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 68.846 50.064 211430000 40049000 13348000 4249100 7174300 8884100 11364000 10397000 10348000 10707000 15020000 16090000 17064000 14298000 11962000 20480000 17419 690 15860 145963;145964;145965;145966;145967;145968;145969;145970;145971;145972;145973;145974;145975;145976;145977 116322;116323;116324;116325;116326;116327;116328;116329;116330;116331;116332;116333;116334 116322 13 FVGPGGYNLK Unmodified 1050.5498 0.54983053 3490 Q8TCS8 PNPT1 Polyribonucleotide nucleotidyltransferase 1, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 60.745 55.906 2 0.0084252 72001 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.324 58.846 17238000 0 13298000 3940000 0 0 0 0 0 0 0 0 0 0 0 0 17420 3490 15861 145978;145979 116335;116336 116335 2 FVGQDVEGER Unmodified 1134.5306 0.53055165 1061 P17812 CTPS1 CTP synthase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.025 32.212 2 0.0015449 35042 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 93.111 69.682 309820000 0 0 0 19800000 15934000 30787000 20403000 19606000 13492000 24183000 45064000 31921000 22840000 25072000 40719000 17421 1061 15862 145980;145981;145982;145983;145984;145985;145986;145987;145988;145989;145990;145991 116337;116338;116339;116340;116341;116342;116343;116344;116345;116346;116347 116341 11 FVGTDPASDEVVLMK Oxidation (M) 1622.7862 0.78617399 3615 Q92538 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 66.768 66.92 2 8.1445E-06 76738 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 79.693 67.53 60270000 0 0 0 0 3406000 8275500 5165000 4725000 3289200 6251100 5541800 7251500 5994100 4276300 6094400 17422 3615 15863 145992;145993;145994;145995;145996;145997;145998;145999;146000;146001;146002 116348;116349;116350;116351;116352;116353;116354;116355;116356;116357;116358;116359 116350 5111 12 FVGTDPASDEVVLMK Unmodified 1606.7913 0.79125936 3615 Q92538 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 0 0 0 By MS/MS 10 0 1 1 77.193 76.698 2 0.0081773 89035 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 39.917 17.197 2109900 0 0 0 2109900 0 0 0 0 0 0 0 0 0 0 0 17423 3615 15863 146003 116360 116360 1 FVHDNYVIRR Unmodified 1317.6942 0.69420335 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS 10 0 5 1 1 1 1 1 33.646 34.023 3 0.012927 36035 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.229 10.9 24580000 0 0 0 0 0 5753200 0 0 3455900 0 0 4116100 0 2670200 8584400 17424 1300 15864 146004;146005;146006;146007;146008 116361 116361 1 FVHLLDQSDQDFQEELDLMK Oxidation (M) 2465.1421 0.14205573 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 1 0 By MS/MS By MS/MS 2.4 0.49 3 2 3 2 89.126 83.538 2;3 2.0531E-99 106327 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 169.28 161.75 225090000 142460000 82627000 0 0 0 0 0 0 0 0 0 0 0 0 0 17425 1518 15865 146009;146010;146011;146012;146013 116362;116363;116364;116365;116366;116367;116368;116369;116370;116371 116370 2402 10 FVHLLDQSDQDFQEELDLMK Unmodified 2449.1471 0.14714111 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 2 3 1 95.306 90.042 2;3 6.4907E-100 113413 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 172.37 158.26 321050000 218350000 99727000 2975500 0 0 0 0 0 0 0 0 0 0 0 0 17426 1518 15865 146014;146015;146016;146017;146018;146019 116372;116373;116374;116375;116376;116377 116377 6 FVIATSTK Unmodified 865.49092 0.49091866 2083 Q02878 RPL6 60S ribosomal protein L6 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40.726 40.115 2 0.012186 43377 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 75.213 32.213 747510000 197880000 0 6887000 32511000 33526000 29175000 33195000 32878000 24535000 56627000 53327000 67399000 49100000 51429000 79036000 17427 2083 15866 146020;146021;146022;146023;146024;146025;146026;146027;146028;146029;146030;146031;146032;146033 116378;116379;116380;116381;116382;116383;116384;116385;116386;116387 116382 9 FVIGGPQGDAGLTGR Unmodified 1443.747 0.74702678 1297 P31153 MAT2A S-adenosylmethionine synthase isoform type-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.184 68.263 2 9.0949E-19 77488 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.09 87.846 178230000 0 0 0 6653500 5394800 7339400 6903300 5544700 5792800 13611000 22767000 31778000 10751000 20073000 41621000 17428 1297 15867 146034;146035;146036;146037;146038;146039;146040;146041;146042;146043;146044;146045 116388;116389;116390;116391;116392;116393;116394;116395;116396;116397;116398;116399;116400 116392 13 FVIGGPQGDAGLTGRK Unmodified 1571.842 0.8419898 1297 P31153 MAT2A S-adenosylmethionine synthase isoform type-2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 1 1 2 2 1 1 2 2 1 2 2 57.322 57.516 2;3 2.1118E-21 65131 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 96.163 83.781 641670000 0 0 0 24099000 19846000 32439000 37230000 39304000 19383000 31757000 83719000 81087000 30684000 62594000 179530000 17429 1297 15868 146046;146047;146048;146049;146050;146051;146052;146053;146054;146055;146056;146057;146058;146059;146060;146061;146062;146063 116401;116402;116403;116404;116405;116406;116407;116408;116409;116410;116411;116412;116413;116414;116415;116416;116417;116418;116419;116420;116421;116422 116409 22 FVIHPESNNLIIIETDHNAYTEATK Unmodified 2868.4294 0.42938762 2528 Q15393 SF3B3 Splicing factor 3B subunit 3 yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 2 2 3 1 85.706 79.919 3;4 1.4394E-12 102707 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.645 72.35 47386000 43740000 3645600 0 0 0 0 0 0 0 0 0 0 0 0 0 17430 2528 15869 146064;146065;146066;146067 116423;116424;116425 116424 3 FVIKPIDK Unmodified 958.58515 0.5851534 1198;1017;1345 P26038;P35241;P15311 MSN;RDX;EZR Moesin;Radixin;Ezrin no no 0 0 1 By MS/MS 2 0 1 1 58.114 49.909 2 0.029199 67924 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 122.74 57.939 226550000 226550000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17431 1198;1345;1017 15870 146068 116426 116426 0 FVINYDYPNSSEDYIHR Unmodified 2130.9647 0.96468371 1062 P17844 DDX5 Probable ATP-dependent RNA helicase DDX5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 76.131 76.291 3 1.1716E-13 88098 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 92.38 87.276 102020000 0 0 0 0 0 6924700 0 6187000 7805100 10790000 8831400 9031200 0 6077600 46368000 17432 1062 15871 146069;146070;146071;146072;146073;146074;146075;146076 116427;116428;116429;116430;116431;116432;116433;116434 116428 8 FVINYDYPNSSEDYVHR Unmodified 2116.949 0.94903365 3670 Q92841 DDX17 Probable ATP-dependent RNA helicase DDX17 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 73.838 73.951 3 8.2831E-10 85080 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 61.962 58.675 138310000 0 0 0 0 2309700 13759000 0 6150800 10309000 19514000 8507900 15212000 6636900 9560600 46354000 17433 3670 15872 146077;146078;146079;146080;146081;146082;146083;146084;146085;146086 116435;116436;116437;116438;116439;116440;116441;116442;116443;116444 116435 10 FVIPLDEDEVPPGVAK Unmodified 1723.9033 0.90325265 855 P07992 ERCC1 DNA excision repair protein ERCC-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 86.122 86.196 2 0.00039086 99571 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.55 48.979 23177000 0 0 0 0 1772600 2984500 2054600 0 0 3042800 0 4189600 2101000 2136100 4895500 17434 855 15873 146087;146088;146089;146090;146091;146092;146093;146094 116445;116446;116447;116448;116449;116450;116451;116452;116453;116454 116449 9 FVIPLHSA Unmodified 882.49634 0.49633839 3835 Q96F86 EDC3 Enhancer of mRNA-decapping protein 3 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.758 73.824 2 0.01358 84320 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.021 43.297 178020000 0 0 0 12514000 10954000 14249000 12449000 14845000 10214000 16724000 17210000 13700000 16596000 12687000 25875000 17435 3835 15874 146095;146096;146097;146098;146099;146100;146101;146102;146103;146104;146105;146106 116455;116456;116457;116458;116459;116460 116457 6 FVIQGAGAK Unmodified 889.50215 0.50215205 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 37.242 37.396 2 0.0079913 41248 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 70.912 29.41 496470000 0 0 0 28714000 34662000 45195000 31821000 34527000 22367000 53733000 0 69392000 48301000 46001000 81759000 17436 3641 15875 146107;146108;146109;146110;146111;146112;146113;146114;146115;146116;146117 116461;116462;116463;116464;116465;116466;116467;116468;116469 116466 9 FVLCPECENPETDLHVNPK Unmodified 2297.0457 0.045652924 1751 P55010 EIF5 Eukaryotic translation initiation factor 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 78.73 73.986 3 1.3793E-52 89567 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 139.04 135.6 213350000 7318300 192290000 13745000 0 0 0 0 0 0 0 0 0 0 0 0 17437 1751 15876 146118;146119;146120;146121 116470;116471;116472;116473 116471 4 FVLDHEDGLNLNEDLENFLQK Unmodified 2501.2074 0.20743318 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 2 1 1 1 1 95.801 91.17 3 1.1738E-140 115899 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 166.91 162.6 43719000 35006000 7963500 748800 0 0 0 0 0 0 0 0 0 0 0 0 17438 2459 15877 146122;146123;146124 116474;116475 116475 2 FVLNLIK Unmodified 845.53747 0.53747492 3504 Q8TDN6 BRIX1 Ribosome biogenesis protein BRX1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.342 81.403 2 0.023657 94106 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 101.33 69.393 103920000 0 0 0 3479600 4193500 7748000 4440100 5834800 4898800 10658000 8899400 12035000 10839000 9514500 21378000 17439 3504 15878 146125;146126;146127;146128;146129;146130;146131;146132;146133;146134;146135;146136 116476;116477;116478;116479;116480;116481;116482 116477 7 FVLPLQDHTIK Unmodified 1309.7394 0.73942221 1720 P53618 COPB1 Coatomer subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.319 74.382 3 0.00021917 84834 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 93.096 82.787 179210000 0 0 0 8110700 6336200 20045000 7808800 10404000 8393600 20793000 20369000 14699000 13619000 15253000 33376000 17440 1720 15879 146137;146138;146139;146140;146141;146142;146143;146144;146145;146146;146147;146148 116483;116484;116485;116486;116487;116488;116489;116490;116491;116492;116493;116494;116495 116491 13 FVLSGANIMCPGLTSPGAK Unmodified 1918.9645 0.96448948 4990 Q9ULC4 MCTS1 Malignant T-cell-amplified sequence 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 88.301 84.026 2 1.7652E-17 106507 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.92 98.155 35667000 9079100 21819000 0 0 0 0 0 0 0 0 0 0 0 0 4769000 17441 4990 15880 146149;146150;146151 116496;116497;116498 116498 3 FVLSGANIMCPGLTSPGAK Oxidation (M) 1934.9594 0.9594041 4990 Q9ULC4 MCTS1 Malignant T-cell-amplified sequence 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 82.089 77.888 2 2.2318E-05 98855 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.431 63.295 29335000 4881500 17308000 0 0 0 0 0 0 0 0 0 0 0 0 7145600 17442 4990 15880 146152;146153;146154 116499;116500;116501 116501 6334 2 FVLSSGK Unmodified 736.41194 0.41194006 1225 P27797 CALR Calreticulin yes yes 0 0 0 By MS/MS By matching By matching 2 0 3 1 1 1 35.846 30.962 1 0.025521 43823 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 151.17 44.412 1131500000 397050000 661300000 73198000 0 0 0 0 0 0 0 0 0 0 0 0 17443 1225 15881 146155;146156;146157 116502 116502 0 FVMQEEFSR Unmodified 1171.5332 0.53319418 1270 P30101 PDIA3 Protein disulfide-isomerase A3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.428 60.533 2 0.0064509 69627 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 75.043 59.381 245680000 0 0 0 5893100 8221300 7769800 7275200 10398000 8346800 12616000 34839000 29713000 8805000 25213000 86592000 17444 1270 15882 146158;146159;146160;146161;146162;146163;146164;146165;146166;146167;146168;146169 116503;116504;116505;116506;116507;116508;116509;116510;116511;116512;116513;116514 116514 12 FVMQEEFSR Oxidation (M) 1187.5281 0.52810881 1270 P30101 PDIA3 Protein disulfide-isomerase A3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 2 2 2 1 2 2 39.602 39.985 2 0.0019877 43087 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 126.52 115.81 194000000 0 0 0 0 6131800 0 0 10855000 0 0 18704000 56039000 6694000 23708000 71863000 17445 1270 15882 146170;146171;146172;146173;146174;146175;146176;146177;146178;146179;146180;146181;146182 116515;116516;116517;116518;116519;116520;116521;116522;116523;116524 116515 1873 7 FVMQEEFSRDGK Oxidation (M) 1487.6715 0.67147858 1270 P30101 PDIA3 Protein disulfide-isomerase A3 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.11 3.9 7 2 9 3 3 3 1 1 1 1 1 2 2 35.677 33.473 2;3 2.0459E-22 41911 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 171.87 161.64 961190000 171370000 404550000 269880000 0 0 2552600 4527400 0 4975700 0 19988000 20753000 17821000 0 44765000 17446 1270 15883 146183;146184;146185;146186;146187;146188;146189;146190;146191;146192;146193;146194;146195;146196;146197;146198;146199;146200 116525;116526;116527;116528;116529;116530;116531;116532;116533;116534;116535;116536;116537;116538;116539;116540;116541 116538 1873 15 FVMQEEFSRDGK Unmodified 1471.6766 0.67656396 1270 P30101 PDIA3 Protein disulfide-isomerase A3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.67 3.89 4 1 4 3 1 1 1 1 1 1 54.863 52.203 2;3 0.0001116 56972 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.289 74.602 683040000 232180000 312300000 20125000 0 0 0 0 0 7661900 0 22822000 17893000 0 0 70056000 17447 1270 15883 146201;146202;146203;146204;146205;146206;146207;146208;146209 116542;116543;116544;116545;116546;116547;116548;116549;116550 116544 8 FVNDLGVDEAGIDQDGVFK Unmodified 2036.9691 0.96910039 3088 Q7Z3V4 UBE3B Ubiquitin-protein ligase E3B yes yes 0 0 0 By MS/MS 2 0 1 1 86.36 81.586 2 0.00012704 101444 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.265 82.477 16557000 0 16557000 0 0 0 0 0 0 0 0 0 0 0 0 0 17448 3088 15884 146210 116551 116551 1 FVNLGIEPPK Unmodified 1112.623 0.62299547 1369 P35998 PSMC2 26S protease regulatory subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 1 1 1 1 2 2 1 74.135 74.204 2 0.00076616 85005 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 120.15 97.225 753340000 0 0 0 43538000 57650000 65441000 24626000 32369000 22649000 114090000 111820000 138650000 37794000 35157000 69551000 17449 1369 15885 146211;146212;146213;146214;146215;146216;146217;146218;146219;146220;146221;146222;146223;146224 116552;116553;116554;116555;116556;116557;116558;116559;116560;116561;116562;116563;116564;116565;116566 116557 15 FVNLISER Unmodified 976.53418 0.53418046 5211 Q9Y4W2 LAS1L Ribosomal biogenesis protein LAS1L yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 62.502 62.47 2 0.0081134 71515 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 87.323 37.298 57262000 0 0 0 6415600 4486900 5867500 5399500 7604200 0 5952600 9547400 0 11988000 0 0 17450 5211 15886 146225;146226;146227;146228;146229;146230;146231;146232;146233 116567;116568;116569;116570;116571;116572;116573 116567 7 FVNPEDVAR Unmodified 1045.5193 0.51925868 2175 Q0VDF9 HSPA14 Heat shock 70 kDa protein 14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 48.335 48.658 2 0.012192 54469 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 61.679 41.197 34752000 0 0 0 0 0 7466300 0 0 0 9753600 0 17532000 0 0 0 17451 2175 15887 146234;146235;146236;146237;146238;146239 116574;116575;116576;116577 116576 4 FVNSINK Unmodified 820.4443 0.44430282 637;420 O95263;O60658 PDE8B;PDE8A High affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8B;High affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8A no no 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 22.171 22.168 2 0.040686 23317 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 68.485 26.01 15347000 0 0 0 3059800 0 7806400 0 4480700 0 0 0 0 0 0 0 17452 637;420 15888 146240;146241;146242 116578 116578 1 FVNVVPTFGK Unmodified 1106.6124 0.61243078 1920 P62861 FAU 40S ribosomal protein S30 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.799 76.859 2 0.00092213 88526 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 113.62 101.42 481950000 0 0 0 25542000 27355000 33554000 32895000 36032000 27797000 38911000 49767000 66259000 33117000 38740000 71986000 17453 1920 15889 146243;146244;146245;146246;146247;146248;146249;146250;146251;146252;146253;146254 116579;116580;116581;116582;116583;116584;116585;116586;116587;116588;116589;116590 116581 9 FVNVVPTFGKK Unmodified 1234.7074 0.7073938 1920 P62861 FAU 40S ribosomal protein S30 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.176 66.261 3 0.00063813 75851 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 63.32 43.558 108320000 0 0 0 9646700 7004600 5405300 8299800 9801000 4964200 11113000 7759700 15056000 7655700 5982000 15635000 17454 1920 15890 146255;146256;146257;146258;146259;146260;146261;146262;146263;146264;146265;146266 116591;116592;116593;116594;116595;116596;116597;116598;116599;116600 116596 10 FVPAEMGTHTVSVK Unmodified 1501.7599 0.75989966 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.39 5 2 20 3 3 1 1 1 2 1 1 2 2 2 2 2 2 2 54.539 53.138 2;3 0.00024401 58227 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.386 73.386 1890200000 496340000 399710000 145740000 29293000 30591000 60029000 32294000 41639000 25186000 86838000 104570000 97972000 50310000 66565000 223110000 17455 1124 15891 146267;146268;146269;146270;146271;146272;146273;146274;146275;146276;146277;146278;146279;146280;146281;146282;146283;146284;146285;146286;146287;146288;146289;146290;146291;146292;146293 116601;116602;116603;116604;116605;116606;116607;116608;116609;116610;116611;116612;116613;116614;116615;116616;116617;116618;116619;116620;116621;116622;116623;116624 116606 20 FVPAEMGTHTVSVK Oxidation (M) 1517.7548 0.75481428 1124 P21333 FLNA Filamin-A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 6.8 3.92 4 6 2 2 1 1 1 2 1 40.045 37.998 2;3 0.0012123 42880 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 61.657 56.503 418540000 131910000 0 154340000 28530000 0 40570000 12321000 0 28813000 0 0 0 0 0 22047000 17456 1124 15891 146294;146295;146296;146297;146298;146299;146300;146301;146302;146303 116625;116626;116627;116628;116629;116630;116631;116632 116632 1613 5 FVPAENDSILMNPAQDGEVQLSQNDDK Oxidation (M) 2989.3611 0.36110964 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 1 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.3 2.1 1 9 1 1 1 1 1 1 1 1 1 1 78.574 78.322 3 2.2731E-18 90723 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 62.032 61.21 91381000 0 27497000 0 0 2586600 5508000 0 2935900 0 7655200 6379600 11782000 7342800 6387900 13307000 17457 2203 15892 146304;146305;146306;146307;146308;146309;146310;146311;146312;146313 116633;116634;116635;116636;116637;116638;116639;116640 116634 3579 8 FVPDECPR Unmodified 1018.4542 0.45421558 640 O95302 FKBP9 Peptidyl-prolyl cis-trans isomerase FKBP9 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 30.203 30.517 2 0.01982 31946 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.306 34.884 41746000 0 0 0 1576900 0 0 0 3588900 0 0 0 13241000 3230000 7482200 12628000 17458 640 15893 146314;146315;146316;146317;146318;146319 116641 116641 1 FVPLLPGNR Unmodified 1011.5866 0.58655038 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.491 72.561 2 0.0052608 83622 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 78.616 58.334 862400000 0 0 0 45169000 47476000 78165000 57805000 45274000 45842000 70594000 71252000 101500000 74698000 81173000 143450000 17459 1986 15894 146320;146321;146322;146323;146324;146325;146326;146327;146328;146329;146330;146331 116642;116643;116644;116645;116646;116647;116648;116649;116650;116651;116652;116653 116647 12 FVPNLPK Unmodified 813.47487 0.47487467 4737 Q9NY33 DPP3 Dipeptidyl peptidase 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 59.496 53.521 2 0.029482 72772 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.669 79.23 1142900000 477280000 609300000 56371000 0 0 0 0 0 0 0 0 0 0 0 0 17460 4737 15895 146332;146333;146334 116654;116655 116654 2 FVPPALEK Unmodified 899.51165 0.5116541 3412 Q8NCW5 APOA1BP NAD(P)H-hydrate epimerase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 52.637 53.131 2 0.044838 59280 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.756 48.756 217760000 0 0 0 0 0 0 0 0 0 0 43579000 43583000 0 26776000 103820000 17461 3412 15896 146335;146336;146337;146338 116656 116656 1 FVPPIPK Unmodified 796.48471 0.48471107 2956 Q6PIW4 FIGNL1 Fidgetin-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 66.84 60.851 2 0.047411 78154 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.72 56.735 144790000 44320000 95493000 4981000 0 0 0 0 0 0 0 0 0 0 0 0 17462 2956 15897 146339;146340;146341 116657 116657 1 FVPPQTSSGNR Unmodified 1188.5887 0.58873523 2891 Q6KC79 NIPBL Nipped-B-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 26.424 26.651 2 0.0068959 28441 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 56.258 29.004 35240000 0 0 0 0 3537700 0 0 4501500 2760500 6004100 7116000 0 5602500 0 5717300 17463 2891 15898 146342;146343;146344;146345;146346;146347;146348 116658;116659;116660;116661;116662 116659 4 FVPQEMGVHTVSVK Unmodified 1556.8021 0.80209882 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60.399 59.291 3 0.00020659 66463 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.401 66.961 188900000 25152000 13748000 6997700 5590200 4522500 11448000 6386300 4973200 4948300 10494000 22434000 16480000 7171800 12845000 35707000 17464 487 15899 146349;146350;146351;146352;146353;146354;146355;146356;146357;146358;146359;146360;146361;146362;146363 116663;116664;116665;116666;116667;116668 116665 5 FVPQEMGVHTVSVK Oxidation (M) 1572.797 0.79701344 487 O75369 FLNB Filamin-B yes yes 0 1 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 43.899 44.346 3 0.0014961 48500 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.44 38.234 52749000 0 0 0 0 0 0 0 0 5051800 0 12393000 0 0 0 35304000 17465 487 15899 146364;146365;146366 116669;116670 116669 615 2 FVPSDEK Unmodified 820.39668 0.39668393 2916 Q6P1J9 CDC73 Parafibromin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 15.424 14.827 2 0.02342 13787 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 86.086 66.24 670520000 7849300 278200000 0 20670000 15948000 0 0 0 0 38134000 61027000 60469000 68300000 64846000 55076000 17466 2916 15900 146367;146368;146369;146370;146371;146372;146373;146374;146375;146376 116671;116672;116673;116674;116675;116676 116673 6 FVPTALR Unmodified 802.47012 0.47012364 5123 Q9Y2W2 WBP11 WW domain-binding protein 11 yes yes 0 0 0 By MS/MS 10 0 1 1 47.117 47.352 2 0.048847 52302 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 64.803 7.3398 12366000 0 0 0 0 0 0 0 0 0 0 0 0 0 12366000 0 17467 5123 15901 146377 116677 116677 1 FVPYYDLFMPSLK Unmodified 1618.8105 0.81053824 149 O00410 IPO5 Importin-5 yes yes 0 0 0 By MS/MS By MS/MS 2 0 4 2 2 99.663 92.672 2;3 0.00040397 117774 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.171 0 48609000 42254000 6355600 0 0 0 0 0 0 0 0 0 0 0 0 0 17468 149 15902 146378;146379;146380;146381 116678;116679;116680;116681 116680 4 FVQAVIPTIEYDYTR Unmodified 1813.9251 0.92505073 4632 Q9NT62 ATG3 Ubiquitin-like-conjugating enzyme ATG3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 85.946 86.088 2 1.3356E-09 99791 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 91.937 83.833 29506000 0 0 0 0 0 1771300 0 3730100 0 7154100 3415100 3291500 0 0 10144000 17469 4632 15903 146382;146383;146384;146385;146386;146387 116682;116683;116684;116685;116686;116687 116683 6 FVQCPDGELQK Unmodified 1319.618 0.61798644 5077 Q9Y230 RUVBL2 RuvB-like 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.25 3.75 6 1 13 1 5 1 1 1 1 1 2 1 1 2 1 1 1 39.573 38.362 2 2.1615E-21 43579 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 170.47 126.7 4027200000 48592000 1947300000 4590100 0 81366000 184450000 114880000 127030000 84303000 193020000 303460000 231720000 242870000 160070000 303490000 17470 5077 15904 146388;146389;146390;146391;146392;146393;146394;146395;146396;146397;146398;146399;146400;146401;146402;146403;146404;146405;146406;146407 116688;116689;116690;116691;116692;116693;116694;116695;116696;116697;116698;116699;116700;116701;116702;116703;116704;116705;116706;116707;116708 116689 20 FVQDAQNK Unmodified 948.46649 0.46649483 5102 Q9Y2H2 INPP5F Phosphatidylinositide phosphatase SAC2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 8.6694 8.7958 2 0.013935 7042 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 71.296 41.111 18765000 0 0 0 1742000 1518200 0 2215500 1795700 1464700 1374500 0 2556900 2256500 1722200 2118800 17471 5102 15905 146408;146409;146410;146411;146412;146413;146414;146415;146416;146417 116709;116710;116711 116711 3 FVQDLSK Unmodified 835.44397 0.44396847 2638 Q16851 UGP2 UTP--glucose-1-phosphate uridylyltransferase yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 27.508 27.721 2 0.050373 28470 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 62.659 17.686 62778000 0 0 0 0 0 9715400 8819500 4899500 3740700 6726900 0 0 0 7963000 20913000 17472 2638 15906 146418;146419;146420;146421;146422;146423;146424 116712 116712 1 FVQDTLK Unmodified 849.45962 0.45961853 347 O43617 TRAPPC3 Trafficking protein particle complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 31.224 31.321 2 0.026498 34110 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 78.616 22.59 84086000 0 0 0 5817600 6157100 11797000 8312300 5908100 0 12815000 16130000 17149000 0 0 0 17473 347 15907 146425;146426;146427;146428;146429;146430;146431;146432 116713;116714 116713 2 FVQDTSK Unmodified 823.40758 0.40758296 2854 Q68CZ2;Q63HR2;Q9HBL0 TNS3;TNS2;TNS1 Tensin-3;Tensin-2;Tensin-1 yes no 0 0 0 By MS/MS 2 0 1 1 8.8333 5.5785 1 0.034371 8246 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 132.08 65.285 7305100 0 7305100 0 0 0 0 0 0 0 0 0 0 0 0 0 17474 2854 15908 146433 116715 116715 0 FVQEEAFR Unmodified 1024.4978 0.49779495 3233 Q8IW35 CEP97 Centrosomal protein of 97 kDa yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 42.997 43.133 2 0.0082674 47863 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 86.794 49.773 61216000 0 0 0 0 7294700 0 6932000 8823800 0 10620000 11379000 0 8828700 7338200 0 17475 3233 15909 146434;146435;146436;146437;146438;146439;146440 116716;116717;116718;116719 116717 4 FVQETELSQR Unmodified 1235.6146 0.61461563 2885 Q6IBW4 NCAPH2 Condensin-2 complex subunit H2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 38.673 38.506 2 0.00058764 43308 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 130.75 98.427 22207000 0 0 0 8123700 0 0 0 0 0 14083000 0 0 0 0 0 17476 2885 15910 146441;146442 116720;116721 116721 1 FVQEVVQSQQVAVGR Unmodified 1672.8897 0.88966827 3679 Q92888 ARHGEF1 Rho guanine nucleotide exchange factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS 10 0 14 1 1 1 1 1 1 1 1 2 1 1 2 60.087 60.254 2;3 2.3966E-27 68833 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 163.78 145.51 89247000 0 0 0 2983900 2628100 7503900 4258700 4489900 3141300 8125600 6158100 16208000 5020600 4405300 24323000 17477 3679 15911 146443;146444;146445;146446;146447;146448;146449;146450;146451;146452;146453;146454;146455;146456 116722;116723;116724;116725;116726;116727;116728;116729;116730;116731 116722 10 FVQIVDEANAR Unmodified 1260.6463 0.64625011 4190 Q9BVJ7 DUSP23 Dual specificity protein phosphatase 23 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.806 55.932 2 0.00026483 63249 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 107.15 76.08 252310000 0 0 0 8224200 11259000 19776000 16709000 24421000 10513000 26409000 28206000 34214000 18472000 19187000 34915000 17478 4190 15912 146457;146458;146459;146460;146461;146462;146463;146464;146465;146466;146467;146468 116732;116733;116734;116735;116736;116737;116738;116739;116740;116741;116742 116733 11 FVQLEGAHPLEK Unmodified 1366.7245 0.72450043 4188 Q9BVI4 NOC4L Nucleolar complex protein 4 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 2 1 1 1 1 1 1 1 1 1 1 1 1 54.563 53.224 2;3 0.0012978 68278 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 81.92 62.788 301460000 55189000 0 42604000 15838000 17017000 19945000 15492000 14540000 11287000 0 18776000 30628000 19332000 15659000 25148000 17479 4188 15913 146469;146470;146471;146472;146473;146474;146475;146476;146477;146478;146479;146480;146481;146482 116743;116744;116745;116746;116747;116748;116749;116750;116751;116752;116753;116754;116755;116756;116757 116751 11 FVQLKPGEKPVPVDQTK Unmodified 1909.0673 0.067298289 521 O75586 MED6 Mediator of RNA polymerase II transcription subunit 6 yes yes 0 0 2 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 48.803 48.783 4 0.012529 54191 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 32.926 31.354 83873000 0 0 0 8300600 9393800 10636000 12366000 10555000 5330100 0 0 0 13217000 14075000 0 17480 521 15914 146483;146484;146485;146486;146487;146488;146489;146490 116758 116758 1 FVQSEAQQER Unmodified 1220.5786 0.57856447 142 O00311 CDC7 Cell division cycle 7-related protein kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 15.894 16.056 2 0.0015959 15789 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 93.649 86.081 50884000 0 0 0 2977800 1560400 3154400 3052900 2744000 2291200 5261000 6351300 8294600 5140400 0 10056000 17481 142 15915 146491;146492;146493;146494;146495;146496;146497;146498;146499;146500;146501 116759;116760;116761;116762;116763;116764 116760 6 FVQVSEDSGR Unmodified 1122.5306 0.53055165 451 O75044;P0DMP2;P0DJJ0 SRGAP2;SRGAP2B;SRGAP2C SLIT-ROBO Rho GTPase-activating protein 2;SLIT-ROBO Rho GTPase-activating protein 2B;SLIT-ROBO Rho GTPase-activating protein 2C yes no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 28.62 28.761 2 0.019368 30703 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 47.853 39.005 42372000 0 0 0 3376300 3914500 3599700 0 2958700 0 6505500 7017500 0 0 4825700 10174000 17482 451 15916 146502;146503;146504;146505;146506;146507;146508;146509 116765 116765 1 FVREVLEK Unmodified 1018.5811 0.58113065 2170 Q09161 NCBP1 Nuclear cap-binding protein subunit 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 42.688 36.744 2 0.014875 50067 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 151.97 86.094 307560000 297260000 10296000 0 0 0 0 0 0 0 0 0 0 0 0 0 17483 2170 15917 146510;146511 116766 116766 1 FVSDVEK Unmodified 822.41233 0.41233399 2221 Q12986 NFX1 Transcriptional repressor NF-X1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 23.571 19.577 2 0.031783 25904 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.029 48.81 39844000 0 39844000 0 0 0 0 0 0 0 0 0 0 0 0 0 17484 2221 15918 146512;146513 116767 116767 1 FVSEDDRNSFTLK Unmodified 1556.7471 0.74708636 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.76 3.87 6 1 10 2 3 2 1 1 1 1 2 1 1 2 53.757 51.6 2;3 3.2105E-24 67940 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 155.48 114.76 2468200000 230240000 1035500000 582480000 0 0 15038000 13420000 11096000 0 0 61535000 116230000 19362000 74219000 309140000 17485 1337 15919 146514;146515;146516;146517;146518;146519;146520;146521;146522;146523;146524;146525;146526;146527;146528;146529;146530 116768;116769;116770;116771;116772;116773;116774;116775;116776;116777;116778;116779;116780;116781;116782;116783;116784;116785 116770 17 FVSELWK Unmodified 907.48035 0.48035398 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.47 3.59 3 2 10 2 2 1 1 1 1 1 1 1 1 1 1 1 69.377 67.753 2 0.023018 76227 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 103.29 51.055 3673500000 1031000000 236780000 231910000 134030000 159350000 0 188240000 208930000 210800000 243040000 279550000 349050000 219820000 181000000 0 17486 1356 15920 146531;146532;146533;146534;146535;146536;146537;146538;146539;146540;146541;146542;146543;146544;146545 116786;116787;116788;116789;116790;116791;116792;116793;116794;116795;116796;116797;116798;116799;116800 116794 15 FVSEMLQK Unmodified 980.5001 0.50010314 5118 Q9Y2T3 GDA Guanine deaminase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 48.554 48.857 2 0.0075172 54899 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 89.369 70.991 120290000 0 0 0 8710700 0 0 0 0 0 0 20906000 26920000 0 20744000 43007000 17487 5118 15921 146546;146547;146548;146549;146550 116801;116802;116803;116804;116805 116802 5 FVSFLGR Unmodified 824.45447 0.45447358 1682 P52292 KPNA2 Importin subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 69.506 69.582 2 0.02335 79813 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 89.903 55.198 512190000 0 0 0 28187000 25288000 47355000 37271000 34467000 31147000 0 50832000 73954000 52923000 45893000 84876000 17488 1682 15922 146551;146552;146553;146554;146555;146556;146557;146558;146559;146560;146561 116806;116807;116808;116809;116810;116811;116812;116813;116814 116810 8 FVSFPTQVLAK Unmodified 1235.6914 0.69140938 3478 Q8TB61 SLC35B2 Adenosine 3'-phospho 5'-phosphosulfate transporter 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82.154 81.176 2 0.00057718 93838 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 80.688 68.161 209640000 16657000 19131000 1693600 6501200 8156700 13050000 11603000 13615000 10442000 13518000 15852000 22726000 14951000 14867000 26875000 17489 3478 15923 146562;146563;146564;146565;146566;146567;146568;146569;146570;146571;146572;146573;146574;146575;146576 116815;116816;116817;116818;116819;116820;116821;116822;116823;116824;116825;116826;116827;116828 116816 14 FVSGEEIVSASTDSQLK Unmodified 1795.884 0.88397377 3461 Q8NHY2 RFWD2 E3 ubiquitin-protein ligase RFWD2 yes yes 0 0 0 By MS/MS 2 0 2 2 75.924 70.983 2;3 0.00028138 88867 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 63.462 46.181 53038000 0 53038000 0 0 0 0 0 0 0 0 0 0 0 0 0 17490 3461 15924 146577;146578 116829;116830 116830 2 FVSISDLLVPK Unmodified 1216.7067 0.7067251 1620 P50395 GDI2 Rab GDP dissociation inhibitor beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.24 3.77 1 3 2 11 3 2 1 1 1 1 1 1 1 1 1 1 1 1 92.225 91.291 2 0.00060083 105636 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.906 56.478 2743400000 1467700000 937690000 105410000 6532700 0 5960500 5415700 6331800 4992100 8200700 23633000 17037000 4018600 18370000 132090000 17491 1620 15925 146579;146580;146581;146582;146583;146584;146585;146586;146587;146588;146589;146590;146591;146592;146593;146594;146595 116831;116832;116833;116834;116835;116836;116837;116838;116839;116840;116841;116842;116843;116844 116835 12 FVSLLQEAK Unmodified 1033.5808 0.5807963 2600 Q16254;Q15329 E2F4;E2F5 Transcription factor E2F4;Transcription factor E2F5 yes no 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 72.382 69.297 2 0.022719 84802 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 114.5 88.559 6830500 0 0 6830500 0 0 0 0 0 0 0 0 0 0 0 0 17492 2600 15926 146596;146597;146598 116845;116846;116847 116847 2 FVSNITR Unmodified 835.4552 0.45520186 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 2 1 1 1 29.556 29.788 2 0.024565 31599 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 97.473 40.02 222420000 0 0 0 15923000 16220000 17381000 17886000 10987000 15968000 18211000 21244000 22100000 15810000 17201000 33489000 17493 1201 15927 146599;146600;146601;146602;146603;146604;146605;146606;146607;146608;146609;146610;146611 116848;116849;116850 116850 3 FVSNLYNQLAK Unmodified 1295.6874 0.68738664 4615 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 71.02 71.146 2 0.037854 81666 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 46.462 35.298 28237000 0 0 0 0 1669300 0 2319900 0 2741200 4384100 0 4742800 3190600 0 9188900 17494 4615 15928 146612;146613;146614;146615;146616;146617;146618 116851;116852 116851 2 FVSRSEMEADIK Unmodified 1410.6813 0.68131498 4783 Q9NZW5 MPP6 MAGUK p55 subfamily member 6 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 50.021 44.1 3 0.011133 60665 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 41.996 21.566 25072000 21531000 0 3541100 0 0 0 0 0 0 0 0 0 0 0 0 17495 4783 15929 146619;146620 116853 116853 1 FVSSGSGGGYGGGMR Oxidation (M) 1390.5936 0.59356261 76 CON__P19012;P19012 KRT15 Keratin, type I cytoskeletal 15 yes no 0 1 0 By MS/MS 10 0 1 1 23.147 22.977 2 0.0045492 24113 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 40.496 38.098 + 3721600 0 0 0 3721600 0 0 0 0 0 0 0 0 0 0 0 17496 76 15930 146621 116854 116854 108 1 FVSSGSGGGYGGGMR Unmodified 1374.5986 0.59864799 76 CON__P19012;P19012 KRT15 Keratin, type I cytoskeletal 15 yes no 0 0 0 By MS/MS 10 0 1 1 34.146 33.738 2 7.581E-10 37395 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 94.616 85.753 + 6849700 0 0 0 6849700 0 0 0 0 0 0 0 0 0 0 0 17497 76 15930 146622 116855;116856 116856 2 FVSSHQGFSGILK Unmodified 1405.7354 0.73539946 3950 Q96PZ0 PUS7 Pseudouridylate synthase 7 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 62.013 61.077 3 0.0027694 85918 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.448 41.81 86806000 16257000 0 0 0 3475100 8280100 6314700 8252700 0 6604300 0 0 7632700 0 29989000 17498 3950 15931 146623;146624;146625;146626;146627;146628;146629;146630 116857;116858;116859;116860 116859 4 FVSTTSQNTQLVRPPIR Unmodified 1943.0589 0.058858868 3574 Q8WWK9 CKAP2 Cytoskeleton-associated protein 2 yes yes 0 0 1 By MS/MS By MS/MS By matching By matching 10 0 4 1 1 1 1 60.879 61.096 3 0.019183 69890 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 19.715 18.288 13213000 0 0 0 0 0 3290600 2396300 0 1100800 0 0 0 0 0 6425100 17499 3574 15932 146631;146632;146633;146634 116861 116861 1 FVSTTSSSR Unmodified 970.47197 0.47197413 74 CON__P13647;P13647 KRT5 Keratin, type II cytoskeletal 5 no no 0 0 0 By MS/MS 10 0 1 1 11.515 11.379 2 0.019448 10213 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 53.968 38.326 + 18137000 0 0 0 18137000 0 0 0 0 0 0 0 0 0 0 0 17500 74 15933 146635 116862 116862 1 FVSTTSSSRK Unmodified 1098.5669 0.56693715 74 CON__P13647;P13647 KRT5 Keratin, type II cytoskeletal 5 no no 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 6.876 6.9424 2 0.022252 4797 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 80.787 69.276 + 42259000 0 0 0 20034000 2078300 2336700 1282000 6723500 0 2297100 0 0 6495000 1012200 0 17501 74 15934 146636;146637;146638;146639;146640;146641;146642;146643 116863;116864 116864 2 FVSTTYSGVTR Unmodified 1216.6088 0.60880197 780 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 42.111 42.208 2 0.00036034 48000 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 98.044 82.382 + 909930000 0 0 0 639020000 24662000 0 0 41678000 0 39554000 0 35441000 118680000 10901000 0 17502 780 15935 146644;146645;146646;146647;146648;146649;146650 116865;116866;116867;116868;116869 116868 4 FVSVGPR Unmodified 760.42317 0.42317345 2199 Q12857 NFIA Nuclear factor 1 A-type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 32.932 33.103 2 0.023327 36641 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 91.14 73.373 461280000 0 0 0 26986000 24522000 30868000 40694000 37104000 24960000 53240000 53108000 55627000 0 45822000 68343000 17503 2199 15936 146651;146652;146653;146654;146655;146656;146657;146658;146659;146660;146661 116870;116871;116872;116873;116874 116873 5 FVTDIDELGK Unmodified 1135.5761 0.57610486 2035 Q00534 CDK6 Cyclin-dependent kinase 6 yes yes 0 0 0 By MS/MS By MS/MS By matching 2 0 3 1 1 1 73.23 67.577 2 0.0032899 85885 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.331 54.256 130790000 9018700 118740000 3033500 0 0 0 0 0 0 0 0 0 0 0 0 17504 2035 15937 146662;146663;146664 116875;116876 116875 2 FVTDSNAVVQLK Unmodified 1319.7085 0.70851601 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 64.982 63.892 2 0.00022208 80771 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.15 86.252 314750000 0 238640000 1844500 5894400 7217400 16089000 8504000 9312800 9799200 0 0 0 0 0 17446000 17505 2361 15938 146665;146666;146667;146668;146669;146670;146671;146672;146673 116877;116878 116878 1 FVTETLEDGSR Unmodified 1252.5935 0.59354583 4724 Q9NXF1 TEX10 Testis-expressed sequence 10 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 13 2 1 1 1 2 1 2 1 1 1 37.885 38.055 2 0.00034474 53078 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 88.496 63.601 65477000 0 0 0 0 8931700 4498600 4464900 0 12015000 5135500 12163000 4941600 6838300 6488200 0 17506 4724 15939 146674;146675;146676;146677;146678;146679;146680;146681;146682;146683;146684;146685;146686 116879;116880;116881;116882;116883;116884;116885;116886;116887 116879 9 FVTETLEDGSRLNSK Unmodified 1694.8475 0.84752869 4724 Q9NXF1 TEX10 Testis-expressed sequence 10 protein yes yes 0 0 1 By MS/MS 2 0 1 1 57.064 53.212 3 0.01845 66662 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 38.337 30.928 18048000 0 0 18048000 0 0 0 0 0 0 0 0 0 0 0 0 17507 4724 15940 146687 116888 116888 1 FVTISGQK Unmodified 878.48617 0.48616764 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 32.617 32.734 2 0.033141 35787 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 53.891 21.108 37225000 0 0 0 3959800 3722100 4969800 4806000 2719700 1762400 4213700 4103300 0 2957200 0 4010600 17508 5049 15941 146688;146689;146690;146691;146692;146693;146694;146695;146696;146697 116889 116889 1 FVTLSATNAK Unmodified 1050.571 0.5709599 3983 Q96S55 WRNIP1 ATPase WRNIP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 43.955 44.193 2 0.00051568 49980 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 125.98 105.42 240440000 0 0 0 0 13768000 25943000 22106000 13760000 11873000 23110000 21184000 31507000 23591000 23269000 30330000 17509 3983 15942 146698;146699;146700;146701;146702;146703;146704;146705;146706;146707;146708 116890;116891;116892;116893;116894;116895;116896;116897;116898;116899;116900;116901;116902;116903 116890 14 FVTPVPGPQGK Unmodified 1125.6182 0.61824444 240 O15014 ZNF609 Zinc finger protein 609 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 2 1 56.212 50.397 2 0.0087963 65168 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.224 47.703 58266000 0 58266000 0 0 0 0 0 0 0 0 0 0 0 0 0 17510 240 15943 146709;146710;146711;146712 116904;116905;116906;116907 116906 4 FVTSNTQELGK Unmodified 1222.6194 0.61936665 4230 Q9BXP5 SRRT Serrate RNA effector molecule homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 36.02 35.829 2 1.3454E-05 39484 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 156.35 131.42 473880000 0 13210000 0 26058000 21050000 32296000 29970000 28328000 27511000 40689000 53265000 48313000 43807000 46431000 62952000 17511 4230 15944 146713;146714;146715;146716;146717;146718;146719;146720;146721;146722;146723;146724;146725 116908;116909;116910;116911;116912;116913;116914;116915;116916;116917;116918;116919;116920;116921 116909 13 FVVDLSDQVAPTDIEEGMR Oxidation (M) 2136.0045 0.0044996155 1369 P35998 PSMC2 26S protease regulatory subunit 7 yes yes 0 1 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 2 2 1 1 2 2 2 2 82.571 82.655 2;3 2.585E-58 95610 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 155.08 143.16 208190000 0 0 0 0 13264000 20058000 1935800 0 4772700 50159000 46150000 40689000 0 0 31166000 17512 1369 15945 146726;146727;146728;146729;146730;146731;146732;146733;146734;146735;146736;146737;146738;146739 116922;116923;116924;116925;116926;116927;116928 116923 2124 6 FVVDLSDQVAPTDIEEGMRVGVDRNK Unmodified 2888.4338 0.43382107 1369 P35998 PSMC2 26S protease regulatory subunit 7 yes yes 0 0 2 By MS/MS 2.33 0.471 2 1 3 89.053 82.436 3;4 4.2928E-79 105978 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 138.93 126.85 188650000 188650000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17513 1369 15946 146740;146741;146742 116929;116930;116931 116930 2 FVVDLSDQVAPTDIEEGMRVGVDRNK Oxidation (M) 2904.4287 0.4287357 1369 P35998 PSMC2 26S protease regulatory subunit 7 yes yes 0 1 2 By MS/MS 2 0 2 2 83.736 75.605 3;4 1.2174E-12 98985 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.23 63.919 74471000 74471000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17514 1369 15946 146743;146744 116932;116933 116933 2124 2 FVVDVDK Unmodified 820.43307 0.43306943 1876 P62195 PSMC5 26S protease regulatory subunit 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.87 3 5 1 1 1 1 1 1 1 1 47.374 45.38 2 0.025588 51296 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 80.462 56.276 731220000 129960000 423310000 25352000 0 0 0 0 14071000 0 51066000 0 64849000 10008000 12605000 0 17515 1876 15947 146745;146746;146747;146748;146749;146750;146751;146752 116934;116935;116936;116937;116938 116938 5 FVVELQQR Unmodified 1017.5607 0.56072956 5278 Q9Y6D9 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 57.61 57.729 2 0.00018388 65920 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 154.09 127.13 350440000 0 0 0 11612000 13168000 20494000 26847000 20249000 22596000 35712000 39158000 31067000 34439000 31334000 63766000 17516 5278 15948 146753;146754;146755;146756;146757;146758;146759;146760;146761;146762;146763;146764 116939;116940;116941;116942;116943;116944;116945;116946;116947;116948;116949;116950;116951;116952;116953;116954;116955 116952 17 FVVMVTPEDLK Unmodified 1276.6737 0.67371041 2231;180 Q13085;O00763 ACACA;ACACB Acetyl-CoA carboxylase 1;Biotin carboxylase;Acetyl-CoA carboxylase 2;Biotin carboxylase no no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 81.84 81.891 2 0.00059078 94583 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 80.239 69.409 31886000 0 0 0 707120 1440000 3273800 1483400 2132600 0 4579600 3282600 3697300 1648500 3977700 5663600 17517 2231;180 15949 146765;146766;146767;146768;146769;146770;146771;146772;146773;146774;146775 116956;116957;116958;116959;116960;116961;116962;116963;116964;116965;116966 116958 11 FVVQNVSAQK Unmodified 1118.6084 0.60840804 3633 Q92598 HSPH1 Heat shock protein 105 kDa yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.529 39.708 2 0.0013675 43465 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 107.15 72.346 432110000 0 0 0 12753000 11519000 13599000 14245000 14389000 10137000 22281000 61928000 58569000 18804000 44192000 149690000 17518 3633 15950 146776;146777;146778;146779;146780;146781;146782;146783;146784;146785;146786;146787 116967;116968;116969;116970;116971;116972;116973;116974;116975;116976;116977;116978 116976 12 FVVTAPPAR Unmodified 956.54435 0.54435122 4878 Q9UFW8 CGGBP1 CGG triplet repeat-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 2 1 1 49.331 49.092 2 0.015568 55991 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 57.281 28.132 24875000 0 0 0 3606300 7181500 0 0 0 0 0 0 0 0 0 14088000 17519 4878 15951 146788;146789;146790;146791;146792 116979;116980;116981;116982 116982 4 FWDFAGMDASFK Oxidation (M) 1436.6071 0.60708741 4693 Q9NW82 WDR70 WD repeat-containing protein 70 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 86.162 82.541 2 0.016845 99943 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 55.567 47.921 13615000 0 9890100 3725200 0 0 0 0 0 0 0 0 0 0 0 0 17520 4693 15952 146793;146794 116983 116983 6091 1 FWEIQGSSLK Unmodified 1193.6081 0.60807369 1436 P41229;Q9BY66 KDM5C;KDM5D Lysine-specific demethylase 5C;Lysine-specific demethylase 5D yes no 0 0 0 By MS/MS 2 0 1 1 75.979 73.216 2 0.023662 89226 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 71.379 39.059 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17521 1436 15953 146795 116984 116984 1 FWESPETVSQLDSVR Unmodified 1778.8475 0.84752869 3687 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.118 79.177 2 2.5866E-20 91143 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 128.28 119.55 99671000 0 0 0 1212900 4167800 8156200 3102700 7007400 6324600 12292000 10828000 9735100 6595100 7661600 22587000 17522 3687 15954 146796;146797;146798;146799;146800;146801;146802;146803;146804;146805;146806;146807 116985;116986;116987;116988;116989;116990;116991;116992;116993;116994;116995 116988 11 FWETDESSK Unmodified 1127.4771 0.47711909 2425 Q14671 PUM1 Pumilio homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.755 33.937 2 0.0037823 37655 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 88.948 70.962 205660000 0 0 0 8043900 8759000 11288000 12927000 21800000 10076000 14073000 26109000 34076000 19360000 13618000 25532000 17523 2425 15955 146808;146809;146810;146811;146812;146813;146814;146815;146816;146817;146818;146819 116996;116997;116998;116999;117000;117001;117002;117003;117004;117005;117006;117007;117008;117009;117010;117011;117012 116997 17 FWEVIGEEHGIDWAGSYCGDSALQLERISVYYNEAHGK Unmodified 4385.0124 0.012385546 47 CON__ENSEMBL:ENSBTAP00000025008 yes yes 0 0 1 By MS/MS 2.2 0.4 4 1 5 94.489 87.282 4;5 0.0010889 92782 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 24.183 16.184 + 68022000 68022000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17524 47 15956 146820;146821;146822;146823;146824 117013;117014;117015;117016;117017 117013 3 FWEVISDEHGIDPAGGYVGDSALQLER Unmodified 2959.3988 0.39881578 4160 Q9BUF5 TUBB6 Tubulin beta-6 chain yes yes 0 0 0 By MS/MS 2 0 1 1 94.041 85.911 3 4.3068E-07 111256 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.152 48.433 4655000 4655000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17525 4160 15957 146825 117018 117018 1 FWEVISDEHGIDPTGTYHGDSDLQLDR Unmodified 3101.4003 0.40027234 842 P07437 TUBB Tubulin beta chain yes yes 0 0 0 By MS/MS 2 0 1 1 87.92 79.789 4 1.9843E-55 103861 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 113.9 28.53 23755000 23755000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17526 842 15958 146826 117019 117019 1 FWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGK Unmodified 4384.0196 0.019638993 842 P07437 TUBB Tubulin beta chain yes yes 0 0 1 By MS/MS 2.25 0.433 3 1 4 94.368 87.391 3;4;5 1.8464E-27 112595 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.386 62.465 639790000 639790000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17527 842 15959 146827;146828;146829;146830 117020;117021;117022;117023;117024 117024 5 FWEVISDEHGIDPTGTYHGDSDLQLER Unmodified 3115.4159 0.4159224 1963 P68371 TUBB4B Tubulin beta-4B chain no no 0 0 0 By MS/MS 2 0 2 2 87.935 79.805 3;4 2.5347E-145 103899 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 160.47 153.82 45108000 45108000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17528 1963 15960 146831;146832 117025;117026;117027 117026 3 FWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGK Unmodified 4425.0462 0.046188094 1963 P68371 TUBB4B Tubulin beta-4B chain yes yes 0 0 1 By MS/MS 2 0 2 2 93.8 85.669 4;5 2.2616E-149 110874 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 144.55 143.26 189960000 189960000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17529 1963 15961 146833;146834 117028;117029;117030 117029 2 FWQNSEHPSINK Unmodified 1485.7001 0.70007659 2763 Q5SXM2 SNAPC4 snRNA-activating protein complex subunit 4 yes yes 0 0 0 By MS/MS 2 0 1 1 48.655 40.829 3 0.026495 56639 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 37.613 28.164 12602000 12602000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17530 2763 15962 146835 117031 117031 1 FWQTYSSAEEVLQK Unmodified 1714.8203 0.82025131 3 A0AVT1 UBA6 Ubiquitin-like modifier-activating enzyme 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 5 1 2 2 81.244 76.707 2;3 2.1534E-14 97291 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 117.25 93.931 107470000 17342000 75034000 15095000 0 0 0 0 0 0 0 0 0 0 0 0 17531 3 15963 146836;146837;146838;146839;146840 117032;117033;117034;117035 117034 4 FWSVDDTQVHTEYSSLR Unmodified 2068.949 0.94903365 1323 P32754 HPD 4-hydroxyphenylpyruvate dioxygenase yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 74.795 75.021 3 1.2541E-28 85914 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 99.451 95.847 61069000 0 0 0 0 0 0 0 0 0 0 0 0 0 6252400 54816000 17532 1323 15964 146841;146842 117036 117036 1 FYAELSDLK Unmodified 1084.5441 0.54407645 3418 Q8NDI1 EHBP1 EH domain-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 69.535 69.671 2 0.0089221 79353 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.224 48.52 32022000 0 0 0 0 1834600 3147500 2718300 2006000 0 2739600 4612500 4025500 2124400 2764700 6049300 17533 3418 15965 146843;146844;146845;146846;146847;146848;146849;146850;146851;146852 117037;117038;117039;117040;117041;117042;117043 117039 7 FYALDPSFPR Unmodified 1211.5975 0.597509 2168 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.833 79.891 2 0.0019696 92345 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 112.84 99.263 305950000 0 0 0 12175000 10968000 31673000 15508000 15221000 16013000 28315000 30632000 34331000 21348000 30705000 59058000 17534 2168 15966 146853;146854;146855;146856;146857;146858;146859;146860;146861;146862;146863;146864 117044;117045;117046;117047;117048;117049;117050;117051;117052;117053;117054;117055 117053 12 FYALSASFEPFSNK Unmodified 1606.7668 0.76675917 1225 P27797 CALR Calreticulin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 86.457 86.616 2 2.5913E-19 100167 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 135.99 122.63 236660000 0 0 0 0 0 0 2087300 13823000 4472500 7806800 34769000 12201000 0 18816000 142690000 17535 1225 15967 146865;146866;146867;146868;146869;146870;146871;146872;146873 117056;117057;117058;117059;117060;117061;117062;117063;117064;117065;117066;117067 117059 12 FYAYNPLAGGLLTGK Unmodified 1583.8348 0.83477916 333 O43488;Q8NHP1 AKR7A2;AKR7L Aflatoxin B1 aldehyde reductase member 2;Aflatoxin B1 aldehyde reductase member 4 yes no 0 0 0 By MS/MS 10 0 1 1 88.875 89.019 2 0.001297 103015 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.555 63.423 3944300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3944300 17536 333 15968 146874 117068 117068 1 FYCDYCDTYLTHDSPSVRK Unmodified 2426.0307 0.030731141 880 P09234 SNRPC U1 small nuclear ribonucleoprotein C yes yes 0 0 1 By MS/MS 2 0 1 1 69.527 61.242 4 0.0010134 81704 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.786 48.945 46274000 46274000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17537 880 15969 146875 117069 117069 1 FYCSELHGPK Unmodified 1236.5597 0.55974328 1026 P15822 HIVEP1 Zinc finger protein 40 yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 39.679 37.902 3 0.0089683 47398 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 59.067 53.12 11876000 0 42370 11834000 0 0 0 0 0 0 0 0 0 0 0 0 17538 1026 15970 146876;146877 117070 117070 1 FYDANYDGK Unmodified 1091.456 0.45598972 2549 Q15555 MAPRE2 Microtubule-associated protein RP/EB family member 2 yes yes 0 0 0 By MS/MS 2 0 1 1 36.248 31.401 2 0.02624 40982 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.812 59.344 40478000 0 40478000 0 0 0 0 0 0 0 0 0 0 0 0 0 17539 2549 15971 146878 117071 117071 1 FYDDAIVSQK Unmodified 1184.5714 0.57135383 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 0 By MS/MS 10 0 1 1 50.537 50.753 2 0.012324 56448 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 85.862 53.745 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17540 528 15972 146879 117072 117072 1 FYDLSSK Unmodified 858.41233 0.41233399 5036 Q9UNM6 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.33 39.509 2 0.024581 43699 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 98.503 61.916 642150000 0 0 0 33108000 59666000 54983000 16280000 21566000 13263000 94221000 112120000 136390000 20172000 27349000 53033000 17541 5036 15973 146880;146881;146882;146883;146884;146885;146886;146887;146888;146889;146890;146891 117073;117074 117073 2 FYDNNTGK Unmodified 957.41921 0.41921028 371 O43815 STRN Striatin yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 13.803 10.413 2 0.031577 13854 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.929 17.648 90367000 0 90367000 0 0 0 0 0 0 0 0 0 0 0 0 0 17542 371 15974 146892;146893 117075 117075 1 FYDPSNDNPSR Unmodified 1310.5527 0.55274365 392 O60293 ZFC3H1 Zinc finger C3H1 domain-containing protein yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 32.777 32.811 2 0.0010688 35920 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 75.294 50.829 65065000 0 0 0 4476100 6246600 8635800 6342100 6815500 6742300 8584500 0 0 9016800 8205600 0 17543 392 15975 146894;146895;146896;146897;146898;146899;146900;146901;146902 117076;117077;117078;117079;117080 117079 5 FYDRNDIEK Unmodified 1198.5619 0.56185177 450 O60942 RNGTT mRNA-capping enzyme;Polynucleotide 5'-triphosphatase;mRNA guanylyltransferase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.649 26.85 3 0.035059 28719 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 51.436 28.082 297890000 0 0 0 7685400 15991000 24310000 28046000 22642000 20178000 23584000 35196000 38571000 24067000 25626000 31988000 17544 450 15976 146903;146904;146905;146906;146907;146908;146909;146910;146911;146912;146913;146914 117081 117081 0 FYDSNTVK Unmodified 972.45526 0.45526144 2248 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 24.145 24.308 2 0.029218 26065 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 56.27 4.8134 331310000 0 0 0 20877000 14799000 27976000 23453000 17007000 16905000 42194000 38566000 0 28895000 41276000 59361000 17545 2248 15977 146915;146916;146917;146918;146919;146920;146921;146922;146923;146924;146925 117082;117083 117082 2 FYDSWESTVK Unmodified 1260.5663 0.56626845 4393 Q9H4A3 WNK1 Serine/threonine-protein kinase WNK1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.485 63.578 2 0.0023993 71773 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 83.998 74.604 168670000 0 0 0 5745400 6579600 10630000 9084000 12793000 10064000 13858000 14204000 20964000 20016000 17078000 27650000 17546 4393 15978 146926;146927;146928;146929;146930;146931;146932;146933;146934;146935;146936;146937 117084;117085;117086;117087;117088;117089;117090;117091;117092 117090 8 FYEAFSK Unmodified 890.41742 0.41741937 862 P08238 HSP90AB1 Heat shock protein HSP 90-beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 45.682 44.094 2 0.022746 59945 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 106.42 69.387 35501000000 2833200000 16970000000 2516900000 702420000 677430000 0 0 1032900000 790430000 0 2060200000 1481100000 1305600000 1525700000 3604900000 17547 862 15979 146938;146939;146940;146941;146942;146943;146944;146945;146946;146947;146948;146949;146950 117093;117094;117095;117096;117097;117098;117099;117100;117101;117102;117103;117104;117105;117106;117107;117108;117109 117099 17 FYEAGEELTGPGAVAAAR Unmodified 1807.8741 0.87407779 4486 Q9HAH7 FBRS Probable fibrosin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.616 69.691 2 1.0031E-19 79442 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 124.86 116.75 58850000 0 0 0 3633300 2920500 3157900 4101800 3935600 4165000 5393500 5737700 6382700 5539600 4656900 9225800 17548 4486 15980 146951;146952;146953;146954;146955;146956;146957;146958;146959;146960;146961;146962 117110;117111;117112;117113;117114;117115;117116;117117;117118;117119;117120;117121 117113 12 FYEDNGQLDDAR Unmodified 1441.611 0.61098681 4521 Q9HCS7 XAB2 Pre-mRNA-splicing factor SYF1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 40.656 40.886 2 3.88E-08 44620 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 123.79 114.47 65937000 0 0 0 5029000 0 7003100 6493300 0 3948900 0 0 12906000 9989800 7893400 12673000 17549 4521 15981 146963;146964;146965;146966;146967;146968;146969;146970;146971 117122;117123;117124;117125;117126;117127;117128;117129;117130 117124 9 FYEDNGQLDDARVILEK Unmodified 2023.9851 0.9850848 4521 Q9HCS7 XAB2 Pre-mRNA-splicing factor SYF1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 79.186 73.807 3 0.00026271 94945 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.746 66.14 19448000 17497000 0 1950700 0 0 0 0 0 0 0 0 0 0 0 0 17550 4521 15982 146972;146973 117131;117132 117131 2 FYEEVHDLER Unmodified 1335.6095 0.60953025 4057;1761 Q99733;P55209 NAP1L4;NAP1L1 Nucleosome assembly protein 1-like 4;Nucleosome assembly protein 1-like 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 3 2 1 2 2 2 2 2 2 2 2 2 48.092 48.259 2;3 0.0018498 54560 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 96.331 86.625 299020000 0 0 0 17725000 9812100 10424000 11852000 13580000 12075000 20111000 34122000 42143000 35740000 31853000 59580000 17551 4057;1761 15983 146974;146975;146976;146977;146978;146979;146980;146981;146982;146983;146984;146985;146986;146987;146988;146989;146990;146991;146992;146993;146994;146995;146996;146997 117133;117134;117135;117136;117137;117138;117139;117140;117141;117142;117143 117141 7 FYEEVHDLERK Unmodified 1463.7045 0.70449327 4057;1761 Q99733;P55209 NAP1L4;NAP1L1 Nucleosome assembly protein 1-like 4;Nucleosome assembly protein 1-like 1 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.84 3.83 1 8 4 19 7 4 2 1 1 2 1 1 2 1 2 2 2 2 2 45.282 43.929 2;3 1.71E-15 44903 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 134.84 106.45 3183300000 803200000 472340000 137370000 42439000 20239000 126250000 48141000 84133000 84899000 65366000 152790000 280510000 172960000 218590000 474050000 17552 4057;1761 15984 146998;146999;147000;147001;147002;147003;147004;147005;147006;147007;147008;147009;147010;147011;147012;147013;147014;147015;147016;147017;147018;147019;147020;147021;147022;147023;147024;147025;147026;147027;147028;147029 117144;117145;117146;117147;117148;117149;117150;117151;117152;117153;117154;117155;117156;117157;117158;117159;117160;117161;117162;117163;117164;117165;117166;117167;117168;117169;117170;117171;117172;117173;117174;117175;117176;117177;117178;117179;117180;117181;117182;117183;117184;117185;117186 117153 40 FYEFSQR Unmodified 975.44503 0.4450311 4654 Q9NUQ9 FAM49B Protein FAM49B yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 45.907 46.256 2 0.049926 50839 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.287 35.033 50609000 0 0 0 0 0 7484800 2856000 0 0 5207600 7750500 6530200 4565700 5253200 10962000 17553 4654 15985 147030;147031;147032;147033;147034;147035;147036;147037 117187 117187 1 FYEFYLSK Unmodified 1095.5277 0.5276981 2390 Q14202 ZMYM3 Zinc finger MYM-type protein 3 yes yes 0 0 0 By MS/MS 2 0 1 1 82.163 74.033 2 0.014055 96975 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.492 50.121 13447000 13447000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17554 2390 15986 147038 117188 117188 1 FYEGTADEMCK Oxidation (M) 1365.5217 0.5217028 2635 Q16775 HAGH Hydroxyacylglutathione hydrolase, mitochondrial yes yes 0 1 0 By MS/MS 2 0 1 1 28.131 23.826 2 0.00052974 31339 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.044 90.112 15816000 0 15816000 0 0 0 0 0 0 0 0 0 0 0 0 0 17555 2635 15987 147039 117189 117189 4289 1 FYEGTADEMCK Unmodified 1349.5268 0.52678818 2635 Q16775 HAGH Hydroxyacylglutathione hydrolase, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 42.459 37.311 2 0.019872 48464 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.607 69.494 29147000 0 29147000 0 0 0 0 0 0 0 0 0 0 0 0 0 17556 2635 15987 147040 117190 117190 1 FYEQFSK Unmodified 947.43888 0.43888309 850 P07900 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.29 3.91 8 2 11 3 4 3 1 1 1 1 1 1 1 1 1 1 1 41.732 39.732 2 0.012128 53807 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.89 55.455 21945000000 1963200000 13490000000 895950000 281470000 210310000 588230000 347990000 279020000 251600000 0 765020000 568040000 447580000 528800000 1327800000 17557 850 15988 147041;147042;147043;147044;147045;147046;147047;147048;147049;147050;147051;147052;147053;147054;147055;147056;147057;147058;147059;147060;147061 117191;117192;117193;117194;117195;117196;117197;117198;117199;117200;117201;117202;117203;117204;117205;117206;117207;117208;117209;117210;117211;117212;117213;117214;117215 117200 20 FYEQMNGPVAGASR Oxidation (M) 1541.6933 0.69327665 1255 P29692 EEF1D Elongation factor 1-delta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.903 37.085 2 1.2426E-19 39746 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 136.96 130.92 254680000 0 0 0 12203000 11595000 18053000 13604000 10968000 10079000 24430000 30481000 46841000 18963000 16579000 40882000 17558 1255 15989 147062;147063;147064;147065;147066;147067;147068;147069;147070;147071;147072;147073 117216;117217;117218;117219;117220;117221;117222;117223;117224;117225;117226;117227;117228;117229 117220 1856 14 FYEQMNGPVAGASR Unmodified 1525.6984 0.69836203 1255 P29692 EEF1D Elongation factor 1-delta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 50.378 50.6 2 2.3E-32 57112 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 159.99 138.99 497570000 0 0 0 0 23495000 35251000 28437000 33533000 0 37618000 73802000 65975000 0 59486000 139970000 17559 1255 15989 147074;147075;147076;147077;147078;147079;147080;147081;147082;147083;147084;147085 117230;117231;117232;117233;117234;117235;117236;117237;117238;117239;117240;117241;117242;117243;117244;117245 117231 16 FYEQQLGLAHQVK Unmodified 1559.8096 0.80962704 3745 Q96AY4 TTC28 Tetratricopeptide repeat protein 28 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 63.48 57.45 3 4.346E-09 77539 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.301 84.205 42381000 31291000 0 11090000 0 0 0 0 0 0 0 0 0 0 0 0 17560 3745 15990 147086;147087 117246;117247 117247 2 FYEQVVQAIQR Unmodified 1379.7197 0.7197494 4119 Q9BRX2 PELO Protein pelota homolog yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 73.328 73.698 2 0.00033883 84430 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.668 71.109 8236100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8236100 17561 4119 15991 147088;147089 117248;117249 117248 2 FYFEELGK Unmodified 1031.4964 0.49639797 2177 Q10471 GALNT2 Polypeptide N-acetylgalactosaminyltransferase 2;Polypeptide N-acetylgalactosaminyltransferase 2 soluble form yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 74.417 74.619 2 0.010495 85377 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.469 58.168 53127000 0 0 0 0 0 0 0 0 0 0 11148000 0 8917400 10043000 23019000 17562 2177 15992 147090;147091;147092;147093 117250;117251;117252;117253 117250 4 FYFENALSK Unmodified 1117.5444 0.5444108 2316 Q13557 CAMK2D Calcium/calmodulin-dependent protein kinase type II subunit delta yes yes 0 0 0 By matching By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 73.316 73.373 2 0.013573 84479 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 59.597 22.438 29564000 0 0 0 0 1444700 0 0 6440900 7857300 0 0 13821000 0 0 0 17563 2316 15993 147094;147095;147096;147097 117254;117255 117255 2 FYFENLLSK Unmodified 1159.5914 0.59136099 2315 Q13555 CAMK2G Calcium/calmodulin-dependent protein kinase type II subunit gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 86.201 86.33 2 0.0054364 99793 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.732 64.153 23994000 0 0 0 0 0 2033700 0 2674300 0 3037100 1669200 2365100 1098400 1850200 9265500 17564 2315 15994 147098;147099;147100;147101;147102;147103;147104;147105 117256;117257 117256 2 FYFHDGVR Unmodified 1039.4876 0.48756462 149 O00410 IPO5 Importin-5 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 44.886 45.181 2 0.025168 49732 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 58.917 43.285 15660000 0 0 0 0 0 0 0 0 0 0 0 0 9341500 6318700 0 17565 149 15995 147106;147107 117258;117259;117260 117258 3 FYFLEAYNAK Unmodified 1264.6128 0.61282471 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 81.288 81.348 2 0.0034418 94079 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 76.478 51.659 49579000 0 0 0 1684400 0 8702100 0 3578300 0 5516600 6505000 0 2816400 3808000 16968000 17566 1201 15996 147108;147109;147110;147111;147112;147113;147114;147115 117261;117262;117263 117261 3 FYFNGEYAGFDETQPTAESGGK Unmodified 2414.0339 0.033885488 1972 P78330 PSPH Phosphoserine phosphatase yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 82.791 78.794 2 1.8688E-289 97961 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 263.99 256.45 145760000 0 145760000 0 0 0 0 0 0 0 0 0 0 0 0 0 17567 1972 15997 147116;147117 117264;117265;117266 117264 3 FYGDDPQSSPNLGR Unmodified 1551.6954 0.69538514 1477 P43353 ALDH3B1 Aldehyde dehydrogenase family 3 member B1 yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 47.837 48.099 2 0.00035143 53931 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 87.568 59.169 34519000 0 0 0 1942700 0 0 0 3252300 2185600 4040100 4897200 4411300 4962500 3676700 5150600 17568 1477 15998 147118;147119;147120;147121;147122;147123;147124;147125;147126 117267;117268;117269 117269 3 FYGDEEK Unmodified 886.37086 0.37086311 1225 P27797 CALR Calreticulin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 6.36 4.01 1 3 1 6 2 2 1 1 1 1 1 1 1 26.379 25.721 2 0.029674 21088 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.407 26.009 7683300000 535860000 5506100000 53981000 0 0 64160000 0 0 0 0 324810000 302480000 221020000 212630000 462280000 17569 1225 15999 147127;147128;147129;147130;147131;147132;147133;147134;147135;147136;147137 117270;117271;117272;117273;117274 117271 5 FYGDLMEK Oxidation (M) 1017.4477 0.44773322 4168 Q9BUQ8 DDX23 Probable ATP-dependent RNA helicase DDX23 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.208 40.388 2 0.01087 44803 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 67.169 46.615 77738000 0 0 0 4979800 3886600 5174200 5193200 3903800 5154500 8160600 9181200 11745000 7413800 5210100 7735000 17570 4168 16000 147138;147139;147140;147141;147142;147143;147144;147145;147146;147147;147148;147149 117275;117276;117277;117278;117279;117280 117275 5657 6 FYGDLMEK Unmodified 1001.4528 0.4528186 4168 Q9BUQ8 DDX23 Probable ATP-dependent RNA helicase DDX23 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.561 55.691 2 0.017693 62841 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 65.252 47.404 103770000 0 0 0 5874400 4947900 6775700 6425800 10484000 5380000 10693000 9425600 12980000 6993300 10306000 13488000 17571 4168 16000 147150;147151;147152;147153;147154;147155;147156;147157;147158;147159;147160;147161 117281;117282;117283 117282 3 FYGNNVEK Unmodified 969.4556 0.45559579 4301 Q9GZR1 SENP6 Sentrin-specific protease 6 yes yes 0 0 0 By MS/MS 2 0 1 1 26.01 21.807 2 0.024519 28747 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.191 61.713 37256000 0 37256000 0 0 0 0 0 0 0 0 0 0 0 0 0 17572 4301 16001 147162 117284 117284 1 FYGPAGPYGIFAGR Unmodified 1471.7248 0.72483478 262 O15173 PGRMC2 Membrane-associated progesterone receptor component 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 83.924 84.088 2 0.0080054 97287 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 42.743 34.646 14102000 0 0 0 0 0 0 0 5331400 0 5063800 3706800 0 0 0 0 17573 262 16002 147163;147164;147165 117285 117285 1 FYGPEGPYGVFAGR Unmodified 1515.7147 0.71466402 135 O00264 PGRMC1 Membrane-associated progesterone receptor component 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.831 79.89 2 0.00059439 92175 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 74.841 68.458 143580000 0 0 0 3344200 6847300 11803000 8302700 11365000 12235000 14281000 13788000 21487000 8822900 13580000 17721000 17574 135 16003 147166;147167;147168;147169;147170;147171;147172;147173;147174;147175;147176;147177 117286;117287;117288;117289;117290;117291;117292;117293;117294;117295;117296;117297 117293 11 FYGPQGTPYEGGVWK Unmodified 1684.7886 0.78855725 1881 P62256 UBE2H Ubiquitin-conjugating enzyme E2 H yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 75.46 73.998 2 5.4231E-45 92138 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 157.97 143.28 251500000 47668000 92673000 10530000 5608500 6116600 9423300 0 12017000 8271400 14509000 0 0 11017000 10192000 23477000 17575 1881 16004 147178;147179;147180;147181;147182;147183;147184;147185;147186;147187;147188;147189;147190 117298;117299;117300;117301;117302;117303;117304;117305;117306;117307;117308;117309 117300 12 FYGRDYEYNR Unmodified 1381.6051 0.60511357 2645 Q1KMD3 HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 2 1 1 1 1 1 1 1 34.255 34.436 3 0.0061398 37365 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 58.37 49.857 136770000 0 0 0 4552000 3990900 9835500 6085900 6185800 8846600 12347000 9957000 28906000 15505000 10340000 20216000 17576 2645 16005 147191;147192;147193;147194;147195;147196;147197;147198;147199;147200;147201;147202;147203 117310;117311;117312;117313;117314 117311 5 FYGVTVFK Unmodified 959.51165 0.5116541 2663 Q32P28 LEPRE1 Prolyl 3-hydroxylase 1 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 74.08 74.273 2 0.044749 84973 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.787 22.308 12955000 0 0 0 0 0 0 0 0 0 0 0 0 1768500 2414700 8771900 17577 2663 16006 147204;147205;147206 117315 117315 1 FYHEELNAPIRR Unmodified 1543.7896 0.7895603 4761 Q9NZ63 C9orf78 Uncharacterized protein C9orf78 yes yes 0 0 1 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 2 1 1 1 45.219 45.453 4 0.00078057 50205 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 58.172 40.372 90418000 0 0 0 3513700 2724700 10484000 0 5605000 5943900 0 8757900 17021000 6094000 7004000 23270000 17578 4761 16007 147207;147208;147209;147210;147211;147212;147213;147214;147215;147216;147217 117316;117317;117318;117319 117319 4 FYLDLYPR Unmodified 1085.5546 0.55458155 1704 P52888 THOP1 Thimet oligopeptidase yes yes 0 0 0 By MS/MS 10 0 1 1 82.806 83.006 2 0.025168 95715 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.917 37.146 15892000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15892000 17579 1704 16008 147218 117320 117320 1 FYLDLYPREGK Unmodified 1399.7136 0.71360139 1704 P52888 THOP1 Thimet oligopeptidase yes yes 0 0 1 By MS/MS 2 0 1 1 83.195 75.065 3 0.034051 98193 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.788 31.15 10663000 10663000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17580 1704 16009 147219 117321 117321 1 FYLEEPPGTQK Unmodified 1307.6398 0.63976774 3295 Q8IZH2 XRN1 5'-3' exoribonuclease 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 59.037 58.609 2 0.00031428 67311 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 95.099 70.205 145420000 0 58768000 0 4922800 5439500 7722800 8239700 6778400 5630300 5791700 10821000 10674000 12777000 7853100 0 17581 3295 16010 147220;147221;147222;147223;147224;147225;147226;147227;147228;147229;147230;147231 117322;117323;117324;117325;117326;117327;117328;117329;117330;117331 117331 8 FYLETQAGK Unmodified 1055.5288 0.52876073 189 O14578 CIT Citron Rho-interacting kinase yes yes 0 0 0 By MS/MS 2 0 1 1 51.387 45.641 2 0.017502 59235 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.77 46.415 26533000 0 26533000 0 0 0 0 0 0 0 0 0 0 0 0 0 17582 189 16011 147232 117332 117332 1 FYLPPTPGSEFIGDVTQK Unmodified 1994.9989 0.99894395 5000 Q9ULM3 YEATS2 YEATS domain-containing protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 94.81 89.945 2 0.0016343 111509 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.202 69.002 10293000 0 10293000 0 0 0 0 0 0 0 0 0 0 0 0 0 17583 5000 16012 147233 117333 117333 0 FYLQNRSLPQSDPVLK Unmodified 1904.0156 0.01559707 4506 Q9HC38 GLOD4 Glyoxalase domain-containing protein 4 yes yes 0 0 1 By MS/MS 2 0 1 1 78.685 70.554 3 0.0009715 92757 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.489 53.258 22595000 22595000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17584 4506 16013 147234 117334 117334 1 FYLTLPGTK Unmodified 1038.575 0.57498264 4433 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 80.143 80.164 2 0.0069711 91830 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 73.665 57.521 40603000 0 0 0 3230100 3418000 0 4782400 5510000 5455700 0 0 7667100 4581300 5958200 0 17585 4433 16014 147235;147236;147237;147238;147239;147240;147241;147242 117335;117336;117337;117338;117339;117340;117341;117342 117339 8 FYNLVLLPR Unmodified 1133.6597 0.65971533 2354 Q13895 BYSL Bystin yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 86.871 86.997 2 0.0078586 101067 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 71.296 59.249 16574000 0 0 0 0 0 3321700 0 0 0 2033400 1308200 2292400 0 1583100 6035200 17586 2354 16015 147243;147244;147245;147246;147247;147248 117343;117344;117345;117346;117347 117347 5 FYPDRPHQK Unmodified 1186.5883 0.5883413 3702 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.1 14.262 3 0.012576 13204 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 44.98 20.95 278070000 0 0 0 11126000 12636000 16308000 11002000 15057000 9254000 30024000 25711000 23877000 31288000 22045000 69743000 17587 3702 16016 147249;147250;147251;147252;147253;147254;147255;147256;147257;147258;147259;147260 117348;117349;117350;117351;117352;117353;117354 117353 6 FYPEDVAEELIQDITQK Unmodified 2036.9943 0.99425251 1017 P15311 EZR Ezrin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.4 0.49 6 4 3 5 2 101.98 97.864 2;3 1.7699E-52 121300 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 142.74 136.76 1706500000 997220000 702920000 6311900 0 0 0 0 0 0 0 0 0 0 0 0 17588 1017 16017 147261;147262;147263;147264;147265;147266;147267;147268;147269;147270 117355;117356;117357;117358;117359;117360;117361;117362;117363;117364 117356 10 FYPIPSLHSTGS Unmodified 1304.6401 0.6401021 4365 Q9H2G2 SLK STE20-like serine/threonine-protein kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76.999 75.924 2 0.0027341 92267 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 83.005 74.823 697630000 486960000 8324900 35972000 5687300 7755600 14682000 8879700 10287000 7605800 15250000 18723000 20496000 10202000 12061000 34746000 17589 4365 16018 147271;147272;147273;147274;147275;147276;147277;147278;147279;147280;147281;147282;147283;147284;147285;147286 117365;117366;117367;117368;117369;117370;117371 117369 6 FYPLEIDYGQDEEAVK Unmodified 1914.8887 0.8887248 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.76 2.85 3 1 21 1 2 1 1 1 2 1 2 1 2 2 2 3 2 2 83.266 82.565 2;3 3.8199E-43 101749 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 199.12 189.28 1770800000 64716000 1382600000 18862000 2555600 8301400 29549000 9859800 17119000 14876000 35931000 26838000 28136000 21847000 31438000 78170000 17590 894 16019 147287;147288;147289;147290;147291;147292;147293;147294;147295;147296;147297;147298;147299;147300;147301;147302;147303;147304;147305;147306;147307;147308;147309;147310;147311 117372;117373;117374;117375;117376;117377;117378;117379;117380;117381;117382;117383;117384;117385;117386;117387;117388;117389;117390;117391;117392 117375 20 FYPWTIDNK Unmodified 1182.571 0.5709599 2946 Q6PD74 AAGAB Alpha- and gamma-adaptin-binding protein p34 yes yes 0 0 0 By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 75.368 75.458 2 0.030157 87126 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 48.283 35.695 22809000 0 0 0 1297500 0 3202200 1664600 1384800 0 2122900 2268100 2305800 1309200 1824300 5430000 17591 2946 16020 147312;147313;147314;147315;147316;147317;147318;147319;147320;147321 117393 117393 1 FYQAELEELSFAEDTEECRK Unmodified 2493.1006 0.10058485 1623 P50452 SERPINB8 Serpin B8 yes yes 0 0 1 By MS/MS 2 0 1 1 87.467 79.337 3 7.3388E-38 103345 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 150.45 142.26 12122000 12122000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17592 1623 16021 147322 117394;117395 117394 2 FYQAEMEELDFISAVEK Unmodified 2047.9449 0.94485947 1344 P35237 SERPINB6 Serpin B6 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 96.555 93.041 2 6.4292E-52 114836 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 181.67 173.6 48434000 0 45368000 3066200 0 0 0 0 0 0 0 0 0 0 0 0 17593 1344 16022 147323;147324;147325 117396;117397 117396 2 FYQAEMEELDFISAVEK Oxidation (M) 2063.9398 0.93977409 1344 P35237 SERPINB6 Serpin B6 yes yes 0 1 0 By MS/MS 2 0 1 1 94.516 86.386 2 9.312E-54 111768 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 148.68 142.45 47723000 47723000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17594 1344 16022 147326 117398;117399 117399 2037 2 FYQASTSELYGK Unmodified 1392.6561 0.65614609 411 O60547 GMDS GDP-mannose 4,6 dehydratase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 53.88 52.563 2 3.9649E-07 66889 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.16 114.27 896660000 14488000 657530000 5719300 9936300 8935200 22831000 19335000 15620000 14111000 19061000 19704000 18537000 19332000 19969000 31560000 17595 411 16023 147327;147328;147329;147330;147331;147332;147333;147334;147335;147336;147337;147338;147339;147340;147341;147342 117400;117401;117402;117403;117404;117405;117406;117407;117408;117409;117410 117402 10 FYQAVAATAGKD Unmodified 1240.6088 0.60880197 4699 Q9NWQ9 C14orf119 Uncharacterized protein C14orf119 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 40.825 40.477 2 0.0049433 50479 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.568 71.906 60219000 0 27099000 0 0 1995500 2236300 3521200 0 2210000 3080500 5637800 0 4333200 3855100 6249900 17596 4699 16024 147343;147344;147345;147346;147347;147348;147349;147350;147351;147352 117411;117412;117413;117414;117415;117416;117417;117418 117414 8 FYQEIFESPFLTETGEYYK Unmodified 2390.0994 0.099445858 2329 Q13617 CUL2 Cullin-2 yes yes 0 0 0 By MS/MS 2 0 1 1 97.828 89.698 3 0.00057097 115788 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.768 42.147 15322000 15322000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17597 2329 16025 147353 117419 117419 1 FYQEPNGETPSSLYR Unmodified 1786.8162 0.81622856 3465 Q8NI27 THOC2 THO complex subunit 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.912 60.017 2 3.8327E-19 68512 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 134.75 122.88 72241000 0 0 0 2378600 3055300 3689500 6709400 5316800 3841600 7845300 8237900 6831000 7780800 7710700 8844500 17598 3465 16026 147354;147355;147356;147357;147358;147359;147360;147361;147362;147363;147364;147365 117420;117421;117422;117423;117424;117425;117426;117427;117428;117429;117430;117431;117432 117421 13 FYQGFLFSEKPEK Unmodified 1618.8031 0.80314468 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 76.342 75.775 3 0.00033942 86895 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.078 64.877 178120000 18909000 0 0 5356100 2875600 18060000 5040900 9321000 9748600 11905000 9701800 18639000 10703000 13772000 44084000 17599 1986 16027 147366;147367;147368;147369;147370;147371;147372;147373;147374;147375;147376;147377;147378 117433;117434;117435;117436;117437;117438;117439;117440;117441;117442;117443;117444 117435 12 FYQTSVESTDFANAPEESR Unmodified 2176.9549 0.95490689 1545 P48594 SERPINB4 Serpin B4 yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 4 2 1 1 65.933 65.521 2;3 6.5259E-17 75745 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 117.08 113.5 28319000 0 0 0 26611000 0 0 1708100 0 0 0 0 0 0 0 0 17600 1545 16028 147379;147380;147381;147382 117445;117446;117447;117448 117446 3 FYQTSVESTDFANAPEESRK Unmodified 2305.0499 0.049869904 1545 P48594 SERPINB4 Serpin B4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 58.572 58.671 3 1.2779E-05 67405 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 56.708 53.518 80337000 0 0 0 33677000 3613700 6251200 0 4602500 0 5055400 4777300 6103200 0 5710700 10546000 17601 1545 16029 147383;147384;147385;147386;147387;147388;147389;147390;147391 117449;117450;117451;117452;117453;117454;117455;117456 117455 7 FYQTSVESVDFANAPEESR Unmodified 2174.9756 0.97564233 1251 P29508 SERPINB3 Serpin B3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 18 2 2 2 2 2 2 2 1 1 1 1 74.241 74.257 2;3 3.2968E-53 85903 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 182.57 176.49 252680000 0 0 0 131980000 12432000 8983600 9444500 17932000 0 23219000 16475000 12282000 5204300 4199700 10519000 17602 1251 16030 147392;147393;147394;147395;147396;147397;147398;147399;147400;147401;147402;147403;147404;147405;147406;147407;147408;147409 117457;117458;117459;117460;117461;117462;117463;117464;117465;117466;117467 117465 10 FYQTSVESVDFANAPEESRK Unmodified 2303.0706 0.070605346 1251 P29508 SERPINB3 Serpin B3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.511 67.593 3 3.3577E-37 77486 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 104.88 100.12 231350000 0 0 0 107670000 8605500 16889000 5965300 11959000 6956300 18149000 12996000 12690000 8679800 6165700 14628000 17603 1251 16031 147410;147411;147412;147413;147414;147415;147416;147417;147418;147419;147420;147421 117468;117469;117470;117471;117472;117473;117474;117475;117476;117477;117478;117479;117480;117481;117482;117483;117484;117485 117468 18 FYQVPVPLPDRR Unmodified 1485.8092 0.80923311 5115 Q9Y2R9 MRPS7 28S ribosomal protein S7, mitochondrial yes yes 0 0 1 By matching By matching By MS/MS 10 0 3 1 1 1 75.496 75.614 3 0.0091709 86538 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 37.426 32.287 17184000 0 0 0 0 0 4831400 0 0 0 0 0 6469200 0 5883400 0 17604 5115 16032 147422;147423;147424 117486 117486 1 FYRPENTHK Unmodified 1190.5833 0.58325592 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 11.682 11.815 3 0.031531 9714 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.269 7.4969 82216000 0 0 0 0 13035000 890040 0 0 0 0 0 28616000 0 0 39675000 17605 1201 16033 147425;147426;147427;147428 117487 117487 1 FYSLPQSPQQFK Unmodified 1468.7351 0.73506511 2951 Q6PI48 DARS2 Aspartate--tRNA ligase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 78.564 70.434 2 3.767E-05 92566 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 128.6 114.14 11184000 11184000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17606 2951 16034 147429;147430 117488;117489 117489 2 FYSQAIELNPSNAIYYGNR Unmodified 2219.0647 0.064732107 1709 P53041 PPP5C Serine/threonine-protein phosphatase 5 yes yes 0 0 0 By MS/MS 10 0 1 1 82.82 83.01 3 2.1346E-38 95767 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 113.88 105.28 18596000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18596000 17607 1709 16035 147431 117490;117491 117491 2 FYSVYGSGQR Unmodified 1162.5407 0.5407224 5163 Q9Y3D9 MRPS23 28S ribosomal protein S23, mitochondrial yes yes 0 0 0 By MS/MS 10 0 1 1 44.208 43.701 2 0.010028 49434 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 56.729 40.527 2578500 0 0 0 0 2578500 0 0 0 0 0 0 0 0 0 0 17608 5163 16036 147432 117492 117492 1 FYTDPVEAVK Unmodified 1167.5812 0.58119023 1774 P55809 OXCT1 Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6 4 3 3 1 1 1 1 1 1 62.537 59.734 2 0.01854 76718 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.516 63.146 532620000 14120000 488430000 7999700 0 0 0 0 0 0 0 3862800 0 0 4720500 13486000 17609 1774 16037 147433;147434;147435;147436;147437;147438 117493;117494;117495 117494 3 FYTDVEHTGATSEFYDK Unmodified 2008.8691 0.86905199 623 O95155 UBE4B Ubiquitin conjugation factor E4 B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 63.832 62.407 3 1.0694E-57 79726 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 153.72 134.34 116660000 17732000 63328000 0 0 0 6737200 2823600 0 2104900 5524300 0 0 4357400 4475200 9575500 17610 623 16038 147439;147440;147441;147442;147443;147444;147445;147446;147447 117496;117497;117498;117499;117500;117501 117497 6 FYTEDSPGLK Unmodified 1155.5448 0.54480473 1810 P60468 SEC61B Protein transport protein Sec61 subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 44.217 44.2 2 0.0022428 49637 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 99.442 83.81 103370000 0 0 0 12290000 13299000 9781200 11201000 11759000 12451000 10937000 0 0 21651000 0 0 17611 1810 16039 147448;147449;147450;147451;147452;147453;147454;147455;147456;147457;147458 117502;117503;117504;117505;117506;117507;117508;117509;117510;117511;117512;117513;117514;117515 117504 14 FYTIEILK Unmodified 1025.5797 0.57973367 966 P12273 PIP Prolactin-inducible protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.632 81.694 2 0.0052431 94040 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.59 49.348 655070000 0 0 0 40280000 35223000 96138000 29305000 57741000 35432000 61244000 69857000 59200000 28087000 54811000 87757000 17612 966 16040 147459;147460;147461;147462;147463;147464;147465;147466;147467;147468;147469;147470 117516;117517;117518;117519;117520;117521;117522;117523;117524;117525;117526;117527;117528 117519 13 FYTQQWEDYR Unmodified 1434.6204 0.62042929 2328 Q13616 CUL1 Cullin-1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 65.561 65.817 2 0.0060229 75461 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 76.827 67.613 8557500 0 0 0 0 0 3033300 0 0 0 0 0 0 0 0 5524100 17613 2328 16041 147471;147472 117529 117529 1 FYVEDLK Unmodified 912.45928 0.45928418 494 O75400 PRPF40A Pre-mRNA-processing factor 40 homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57.206 56.022 2 0.030787 63662 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 74.415 44.574 1253700000 11360000 119850000 7035300 60716000 67506000 71809000 89428000 100100000 83186000 0 136180000 127530000 117180000 107190000 154620000 17614 494 16042 147473;147474;147475;147476;147477;147478;147479;147480;147481;147482;147483;147484;147485;147486 117530;117531;117532 117530 3 FYVHNDIFR Unmodified 1209.5931 0.59309232 2263 Q13283 G3BP1 Ras GTPase-activating protein-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 64.261 64.376 3 0.0023471 74247 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 89.247 77.034 279700000 0 0 0 12020000 0 55672000 13781000 18827000 40065000 27308000 0 36510000 0 0 75518000 17615 2263 16043 147487;147488;147489;147490;147491;147492;147493;147494 117533;117534;117535;117536;117537;117538;117539;117540;117541;117542;117543;117544;117545;117546 117533 14 FYVHNDMFR Unmodified 1227.5495 0.54951295 5028 Q9UN86 G3BP2 Ras GTPase-activating protein-binding protein 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 58.74 58.923 3 0.0076359 66192 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.756 46.107 37390000 0 0 0 0 2541700 4650800 2144100 4428800 3414000 2216200 4563200 3535300 0 2616700 7279700 17616 5028 16044 147495;147496;147497;147498;147499;147500;147501;147502;147503;147504 117547;117548 117547 2 FYVPPTQEDGVDPVEAFAQNVLSK Unmodified 2649.2962 0.29624819 2163 Q08945 SSRP1 FACT complex subunit SSRP1 yes yes 0 0 0 By MS/MS 2 0 1 1 99.583 94.87 3 2.2395E-19 117310 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.391 67.562 41958000 0 41958000 0 0 0 0 0 0 0 0 0 0 0 0 0 17617 2163 16045 147505 117549 117549 1 FYVVTYTGDK Unmodified 1191.5812 0.58119023 2201 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 60.517 60.662 2 0.0048243 69165 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 71.425 54.708 83676000 0 0 0 0 5424700 8250700 6357800 7737700 5273800 9316800 9962100 0 9862400 6705300 14784000 17618 2201 16046 147506;147507;147508;147509;147510;147511;147512;147513;147514;147515 117550;117551;117552;117553;117554;117555;117556 117555 6 GAAAAAAASGAAGGGGGGAGAGAPGGGR Unmodified 1951.9209 0.92086184 2860 Q68E01 INTS3 Integrator complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 2 2 2 1 2 2 1 27.254 27.407 2;3 4.399E-86 29451 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 86.211 71.289 234150000 0 0 0 10621000 15175000 36182000 20386000 15553000 13287000 31104000 29269000 9925800 24628000 21102000 6913100 17619 2860 16047 147516;147517;147518;147519;147520;147521;147522;147523;147524;147525;147526;147527;147528;147529;147530;147531;147532;147533;147534;147535;147536;147537 117557;117558;117559;117560;117561;117562;117563;117564;117565;117566;117567;117568;117569;117570;117571;117572;117573;117574 117558 12 GAAAAAAPPPPIEEECPEDLPEK Unmodified 2358.1049 0.10494194 3135 Q86TG7 PEG10 Retrotransposon-derived protein PEG10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 69.419 69.493 2;3 2.9329E-16 79769 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 78.975 73.447 175280000 0 0 0 7215400 8369400 11904000 12370000 9635000 8896900 14966000 15557000 24298000 16050000 15070000 30953000 17620 3135 16048 147538;147539;147540;147541;147542;147543;147544;147545;147546;147547;147548;147549;147550;147551;147552;147553;147554;147555;147556;147557;147558;147559;147560;147561 117575;117576;117577;117578;117579;117580;117581;117582;117583;117584;117585;117586;117587;117588 117585 14 GAAAAATGQPGTAPAGTPGAPPLAGMAIVK Oxidation (M) 2587.3428 0.34282122 2262 Q13263 TRIM28 Transcription intermediary factor 1-beta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 1 2 2 2 2 2 2 2 2 73.335 73.397 2;3 1.5705E-96 84104 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 119.23 99.655 1899300000 0 0 0 144870000 156820000 187700000 11256000 126030000 130680000 194620000 174930000 188310000 220830000 169190000 194040000 17621 2262 16049 147562;147563;147564;147565;147566;147567;147568;147569;147570;147571;147572;147573;147574;147575;147576;147577;147578;147579;147580;147581;147582;147583;147584 117589;117590;117591;117592;117593;117594;117595;117596;117597;117598;117599;117600;117601;117602;117603;117604;117605;117606;117607;117608 117595 3684 20 GAAAAATGQPGTAPAGTPGAPPLAGMAIVK Unmodified 2571.3479 0.3479066 2262 Q13263 TRIM28 Transcription intermediary factor 1-beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 81.884 81.945 2;3 5.7064E-83 94456 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 112.8 106.92 1885200000 0 0 0 57956000 80296000 121410000 86105000 138590000 64079000 186820000 210350000 175980000 103760000 174160000 485660000 17622 2262 16049 147585;147586;147587;147588;147589;147590;147591;147592;147593;147594;147595;147596;147597;147598;147599;147600;147601;147602;147603;147604;147605;147606;147607;147608 117609;117610;117611;117612;117613;117614;117615;117616;117617;117618;117619;117620;117621;117622;117623 117612 15 GAAAAAVMSSSK Unmodified 1049.5175 0.51754412 4325 Q9H0E3 SAP130 Histone deacetylase complex subunit SAP130 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.798 23.004 2 0.00030602 23502 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 82.417 51.188 61001000 0 0 0 2313300 3698400 3553400 3291700 3985900 2728700 7835700 7362800 7379100 6339500 4793200 7718900 17623 4325 16050 147609;147610;147611;147612;147613;147614;147615;147616;147617;147618;147619;147620 117624;117625;117626;117627;117628;117629;117630;117631;117632;117633;117634 117629 4 GAAAAAVMSSSK Oxidation (M) 1065.5125 0.51245874 4325 Q9H0E3 SAP130 Histone deacetylase complex subunit SAP130 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 10.049 10.226 2 0.003946 7889 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 52.49 40.134 12690000 0 0 0 1085600 0 0 0 1366900 1089900 0 0 3783000 2122800 1809700 1432400 17624 4325 16050 147621;147622;147623;147624;147625;147626;147627 117635;117636;117637;117638 117636 5790 1 GAAAAEADRTLFVGNLETK Acetyl (Protein N-term) 1975.0011 0.0010692176 5223 Q9Y580 RBM7 RNA-binding protein 7 yes yes 1 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 85.289 81.805 3 5.297E-41 101584 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.12 118.98 88617000 0 83065000 5551700 0 0 0 0 0 0 0 0 0 0 0 0 17625 5223 16051 147628;147629;147630 117639;117640;117641 117639 3 GAAAAEADRTLFVGNLETK Unmodified 1932.9905 0.99050453 5223 Q9Y580 RBM7 RNA-binding protein 7 yes yes 0 0 1 By MS/MS 2 0 1 1 74.344 71.392 3 0.00057854 87260 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 61.815 52.066 2880700 0 0 2880700 0 0 0 0 0 0 0 0 0 0 0 0 17626 5223 16051 147631 117642;117643 117643 2 GAAAHPDSEEQQQR Unmodified 1522.676 0.67604668 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 6.1115 6.2289 2;3 3.3497E-284 4413 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 213.99 198.45 493170000 0 0 0 24737000 19165000 49501000 32213000 21246000 25039000 48637000 66224000 56164000 36159000 45388000 68700000 17627 5187 16052 147632;147633;147634;147635;147636;147637;147638;147639;147640;147641;147642;147643;147644;147645;147646;147647;147648;147649;147650;147651;147652;147653;147654;147655 117644;117645;117646;117647;117648;117649;117650;117651;117652;117653;117654;117655;117656 117649 13 GAAANPENEDQQQR Unmodified 1526.671 0.67096131 5201 Q9Y4G6 TLN2 Talin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 10.142 10.279 2 0.00062795 6881 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 73.499 58.234 27223000 0 0 0 1484600 1463500 2474600 1634900 1751400 1062100 2005300 3564800 3500200 2123600 2540200 3618200 17628 5201 16053 147656;147657;147658;147659;147660;147661;147662;147663;147664;147665;147666;147667 117657;117658;117659;117660;117661;117662;117663;117664 117659 8 GAAATTTTTEHR Unmodified 1215.5844 0.58437813 4393 Q9H4A3 WNK1 Serine/threonine-protein kinase WNK1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 1 2 2 2 2 2 1 2 2 2 5.8637 5.986 2;3 1.9233E-09 3684 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 140.75 110.5 218580000 0 0 0 20377000 15993000 5575100 28146000 26033000 22104000 16301000 20101000 14930000 12353000 14649000 22015000 17629 4393 16054 147668;147669;147670;147671;147672;147673;147674;147675;147676;147677;147678;147679;147680;147681;147682;147683;147684;147685;147686;147687;147688;147689 117665;117666;117667;117668;117669;117670;117671;117672;117673;117674;117675;117676;117677;117678 117665 11 GAADEVEVEPPEPPGPVASR Unmodified 2001.9643 0.96434936 3409 Q8NCF5 NFATC2IP NFATC2-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 2 1 1 1 2 1 1 2 1 1 1 1 68.059 68.136 2 7.4061E-48 78157 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 147.87 147.87 137390000 0 0 0 10418000 8693100 9553200 12663000 10769000 7901300 12383000 16134000 15355000 10071000 7939600 15510000 17630 3409 16055 147690;147691;147692;147693;147694;147695;147696;147697;147698;147699;147700;147701;147702;147703;147704 117679;117680;117681;117682;117683;117684;117685;117686;117687;117688;117689;117690;117691;117692;117693 117680 15 GAAGALLVYDITR Unmodified 1318.7245 0.72450043 1828 P61019;Q8WUD1 RAB2A;RAB2B Ras-related protein Rab-2A;Ras-related protein Rab-2B yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 83.125 83.187 2 2.5907E-09 95823 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 114.83 97.398 92496000 0 0 0 1242200 4357700 4670700 3892400 7497000 4720300 11149000 7753000 17262000 0 10186000 19766000 17631 1828 16056 147705;147706;147707;147708;147709;147710;147711;147712;147713;147714;147715;147716 117694;117695;117696;117697;117698;117699;117700;117701;117702;117703;117704;117705 117697 12 GAAGALLVYDITRR Unmodified 1474.8256 0.82561145 1828 P61019;Q8WUD1 RAB2A;RAB2B Ras-related protein Rab-2A;Ras-related protein Rab-2B yes no 0 0 1 By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 78.849 78.99 3 9.9344E-09 90838 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.591 69.182 45981000 0 0 0 0 0 3108800 1285900 3116100 2956200 4063900 3689100 0 2363700 3033700 22364000 17632 1828 16057 147717;147718;147719;147720;147721;147722;147723;147724;147725 117706;117707;117708;117709 117707 4 GAAGALLVYDITSR Unmodified 1405.7565 0.75652884 1103;1827 P20338;P61018 RAB4A;RAB4B Ras-related protein Rab-4A;Ras-related protein Rab-4B no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 83.69 83.819 2 1.078E-05 96601 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.548 78.718 64872000 0 0 0 0 0 4290400 0 6107700 0 10184000 7101900 12542000 4039100 6842100 13765000 17633 1103;1827 16058 147726;147727;147728;147729;147730;147731;147732;147733;147734;147735 117710;117711;117712;117713;117714;117715;117716;117717;117718;117719;117720;117721;117722 117713 12 GAAGALMVYDITR Oxidation (M) 1352.6758 0.67583567 1834 P61106 RAB14 Ras-related protein Rab-14 yes yes 0 1 0 By MS/MS 10 0 1 1 70.758 70.3 2 0.00043356 80961 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 74.162 61.936 8337300 0 0 0 0 8337300 0 0 0 0 0 0 0 0 0 0 17634 1834 16059 147736 117723;117724;117725 117723 2973 3 GAAGALMVYDITRR Unmodified 1492.782 0.78203208 1834 P61106 RAB14 Ras-related protein Rab-14 yes yes 0 0 1 By matching By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 73.858 74.061 3 0.0001693 84768 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.964 59.451 18453000 0 0 0 0 0 0 0 2257500 0 0 0 3903500 1566600 2058200 8667300 17635 1834 16060 147737;147738;147739;147740;147741 117726 117726 1 GAAGLVVPLDPLR Unmodified 1276.7503 0.75032125 1112 P20749 BCL3 B-cell lymphoma 3 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 86.296 86.365 2 0.0030697 100531 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 55.567 35.238 31924000 0 0 0 1326000 1234600 1994700 2427900 2586400 1810100 4287500 4055700 3625200 2698000 1986500 3891600 17636 1112 16061 147742;147743;147744;147745;147746;147747;147748;147749;147750;147751;147752;147753 117727;117728;117729;117730;117731;117732;117733 117733 7 GAAGRPLELSDFR Unmodified 1387.7208 0.72081203 1447 P42167 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 60.673 60.944 3 0.015445 68728 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.944 27.894 39090000 0 0 0 0 0 3580600 0 0 2557100 3305800 3816500 4853300 5207800 6900200 8869200 17637 1447 16062 147754;147755;147756;147757;147758;147759;147760;147761 117734;117735;117736 117734 3 GAALDVHESEPFSFAQGPLK Unmodified 2099.0324 0.032369346 1786 P56545 CTBP2 C-terminal-binding protein 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 80.746 80.881 3 2.8935E-07 93223 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.644 64.108 49091000 0 0 0 0 0 4341300 1818400 0 4658000 5730300 5302000 4628000 1980300 4550400 16082000 17638 1786 16063 147762;147763;147764;147765;147766;147767;147768;147769;147770 117737;117738;117739;117740;117741 117739 5 GAANASGSSPDAPAK Unmodified 1299.6055 0.6055075 566 O75962 TRIO Triple functional domain protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 9.8173 9.9292 2 0.0061542 8447 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 54.471 49.858 26171000 0 0 0 2069500 1275000 2078900 2880000 1764600 1546900 2118300 0 4090000 2994200 2535300 2818400 17639 566 16064 147771;147772;147773;147774;147775;147776;147777;147778;147779;147780;147781 117742;117743;117744;117745 117745 3 GAANDSTQFTVAGR Unmodified 1393.6586 0.65860571 659 O95425 SVIL Supervillin yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 39.22 39.063 2 0.010331 43829 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 54.471 46.251 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17640 659 16065 147782;147783 117746;117747 117747 2 GAANHDLTDTTR Unmodified 1270.5902 0.59019179 3877 Q96II8 LRCH3 Leucine-rich repeat and calponin homology domain-containing protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 1 2 2 2 2 2 2 13.119 13.274 2;3 0.0028638 12526 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 47.189 35.976 110970000 0 0 0 4940300 8837600 8941000 8502700 6376500 3290600 15344000 11176000 11542000 10204000 9177800 12635000 17641 3877 16066 147784;147785;147786;147787;147788;147789;147790;147791;147792;147793;147794;147795;147796;147797;147798;147799;147800;147801;147802;147803;147804;147805;147806 117748;117749;117750;117751;117752;117753;117754;117755;117756 117749 7 GAAPAPPGK Unmodified 764.41809 0.41808807 2289 Q13428 TCOF1 Treacle protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.717 11.855 2 0.026849 10871 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 49.65 30.959 208850000 0 0 0 15950000 17634000 16483000 18027000 18838000 15886000 20902000 20388000 22423000 25555000 0 16766000 17642 2289 16067 147807;147808;147809;147810;147811;147812;147813;147814;147815;147816;147817 117757;117758;117759;117760;117761;117762;117763;117764 117764 8 GAAPDSHQLAK Unmodified 1093.5516 0.55162144 4415 Q9H6E5 TUT1 Speckle targeted PIP5K1A-regulated poly(A) polymerase yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 14.008 10.618 2 0.020253 14315 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.955 35.187 47344000 0 47344000 0 0 0 0 0 0 0 0 0 0 0 0 0 17643 4415 16068 147818;147819 117765;117766 117765 2 GAAPNVVYTYTGK Unmodified 1339.6772 0.67721588 2620 Q16630 CPSF6 Cleavage and polyadenylation specificity factor subunit 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 55.555 54.905 2 1.7595E-29 69473 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 160.53 148.25 1307200000 0 275440000 0 54722000 63896000 56168000 78609000 77467000 73313000 86239000 96028000 150400000 90422000 75021000 129520000 17644 2620 16069 147820;147821;147822;147823;147824;147825;147826;147827;147828;147829;147830;147831;147832;147833 117767;117768;117769;117770;117771;117772;117773;117774;117775;117776;117777;117778;117779;117780;117781;117782;117783;117784;117785;117786 117772 19 GAAPNVVYTYTGKR Unmodified 1495.7783 0.77832691 2620 Q16630 CPSF6 Cleavage and polyadenylation specificity factor subunit 6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 47.561 47.685 3 0.02682 52988 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 25.965 13.405 25531000 0 0 0 2711800 0 0 3968500 0 2697500 5597700 0 0 0 4053900 6501100 17645 2620 16070 147834;147835;147836;147837;147838;147839 117787 117787 1 GAAPTPPGK Unmodified 794.42865 0.42865276 2289 Q13428 TCOF1 Treacle protein yes yes 0 0 0 By MS/MS 10 0 1 1 12.42 12.916 2 0.022062 11233 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 51.736 31.949 19230000 0 0 0 0 0 0 0 0 0 0 19230000 0 0 0 0 17646 2289 16071 147840 117788 117788 1 GAASEAGRAMHLMK Oxidation (M) 1444.6915 0.69150251 2403 Q14320 FAM50A Protein FAM50A yes yes 0 1 1 By MS/MS 2 0 1 1 36.745 30.316 3 0.013149 42231 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.785 35.881 13002000 13002000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17647 2403 16072 147841 117789 117789 3937 1 GAASKPVDDPSMYQLK Unmodified 1705.8345 0.83452116 5201 Q9Y4G6 TLN2 Talin-2 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 55.006 49.658 3 0.0019223 61425 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 53.995 47.414 38121000 0 38121000 0 0 0 0 0 0 0 0 0 0 0 0 0 17648 5201 16073 147842;147843 117790;117791;117792 117792 3 GAASPVLQEDHCDSLPSVLQVEEK Unmodified 2607.2486 0.24864607 3374 Q8N9B5 JMY Junction-mediating and -regulatory protein yes yes 0 0 0 By MS/MS 3 0 1 1 82.197 78.924 3 0.0092237 94633 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 25.935 19.375 2675800 0 2675800 0 0 0 0 0 0 0 0 0 0 0 0 0 17649 3374 16074 147844 117793 117793 1 GAASTLVPGVSETSASPGSPSVR Unmodified 2113.0651 0.065126037 3006 Q6ZRS2 SRCAP Helicase SRCAP yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 66.804 66.88 2 0.015862 76710 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 32.702 27.423 42261000 0 0 0 4258900 2273300 3137800 2447800 3642800 0 5023700 3965300 5444600 3346500 4113900 4606700 17650 3006 16075 147845;147846;147847;147848;147849;147850;147851;147852;147853;147854;147855 117794;117795;117796;117797;117798;117799 117796 6 GAAVDEYFR Unmodified 1026.4771 0.47705951 3190 Q86X55 CARM1 Histone-arginine methyltransferase CARM1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 52.073 52.394 2 0.015842 58337 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 57.047 46.58 97040000 0 0 0 0 0 13083000 0 10353000 5357400 13016000 11715000 10878000 0 12310000 20327000 17651 3190 16076 147856;147857;147858;147859;147860;147861;147862;147863 117800;117801;117802 117802 3 GAAVNGPVSHSSLTK Unmodified 1423.7419 0.7419414 4407 Q9H582 ZNF644 Zinc finger protein 644 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 2 2 2 32.221 27.901 2;3 0.00016555 35096 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 63.037 49.074 59368000 22388000 26812000 10168000 0 0 0 0 0 0 0 0 0 0 0 0 17652 4407 16077 147864;147865;147866;147867;147868;147869 117803;117804;117805;117806;117807 117807 3 GAAYGLAGLVK Unmodified 1018.5811 0.58113065 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 73.055 71.493 2 0.0048651 82749 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 60.436 40.659 815380000 234750000 178120000 11548000 19431000 22619000 36493000 26010000 25806000 20019000 41838000 33447000 45090000 34120000 32886000 53205000 17653 3641 16078 147870;147871;147872;147873;147874;147875;147876;147877;147878;147879;147880;147881;147882;147883;147884;147885;147886 117808;117809;117810;117811;117812;117813;117814;117815;117816;117817;117818;117819;117820;117821;117822 117821 15 GACAGSEDAVK Unmodified 1063.4604 0.46042317 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 8.4717 8.6013 2 0.0099348 6172 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.034 38.964 32657000 0 0 0 1384900 1568800 2861200 2142500 1486300 1722500 2078400 5959900 4133300 2777900 2198100 4343800 17654 2344 16079 147887;147888;147889;147890;147891;147892;147893;147894;147895;147896;147897;147898 117823;117824;117825;117826 117823 4 GACASHVSTMASFLK Unmodified 1565.733 0.73303298 4940 Q9UJU6 DBNL Drebrin-like protein yes yes 0 0 0 By matching By MS/MS By matching 10 0 3 1 1 1 63.558 63.642 3 0.024081 72051 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 29.733 24.454 24200000 0 0 0 0 1548100 0 0 0 0 0 0 0 0 5222500 17430000 17655 4940 16080 147899;147900;147901 117827 117827 1 GACHGQTGMFPR Unmodified 1317.5707 0.5706591 1934 P62993 GRB2 Growth factor receptor-bound protein 2 yes yes 0 0 0 By matching By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 28.002 28.411 3 0.0052457 29498 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 34 29.66 41301000 0 0 0 0 0 0 2074900 0 0 3367800 8937800 7044600 0 0 19876000 17656 1934 16081 147902;147903;147904;147905;147906 117828 117828 1 GADCQEVPQDK Unmodified 1245.5296 0.52956537 1498 P46100 ATRX Transcriptional regulator ATRX yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 13.784 13.966 2 0.0014517 12480 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 85.731 65.944 24387000 0 0 0 2145200 1085600 0 1534100 1237200 1733500 2146700 2348700 3022700 2553400 3521800 3058200 17657 1498 16082 147907;147908;147909;147910;147911;147912;147913;147914;147915;147916;147917 117829;117830;117831 117830 3 GADDAMESSKPGPVQVVLVQK Unmodified 2154.0991 0.099068703 2869 Q6DD88 ATL3 Atlastin-3 yes yes 0 0 1 By matching By MS/MS By matching By matching 10 0 4 1 1 1 1 68.709 68.895 3 0.0036755 79144 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 39.585 34.781 13800000 0 0 0 0 0 0 3005000 3714800 0 3774300 3306000 0 0 0 0 17658 2869 16083 147918;147919;147920;147921 117832 117832 0 GADDDRPSWR Unmodified 1173.5163 0.51629857 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 22.852 23.016 3 0.027197 24000 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 39.918 27.705 45580000 0 0 0 2429100 2820600 2648200 1916800 0 2933400 5159800 4611300 0 5649000 8519400 8892500 17659 2378 16084 147922;147923;147924;147925;147926;147927;147928;147929;147930;147931 117833 117833 1 GADELPYLR Unmodified 1032.524 0.52400971 433 O60825 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 2 1 1 1 62.829 62.939 2 0.0052702 71941 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 78.324 59.921 199250000 0 0 0 17615000 26571000 19720000 15403000 16111000 7054300 24060000 18526000 23495000 0 11943000 18753000 17660 433 16085 147932;147933;147934;147935;147936;147937;147938;147939;147940;147941;147942;147943 117834;117835;117836;117837;117838 117837 5 GADFLVTEVENGGSLGSK Unmodified 1778.8687 0.86865806 1000 P14618 PKM Pyruvate kinase PKM yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.18 3.69 2 19 17 22 7 26 5 1 2 2 2 2 2 1 2 3 1 2 2 83.935 82.098 2;3 1.0644E-204 96208 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 252.42 232.22 31543000000 663660000 26079000000 635690000 65895000 177930000 261280000 204920000 258870000 224280000 354990000 563650000 731990000 84405000 240120000 996300000 17661 1000 16086 147944;147945;147946;147947;147948;147949;147950;147951;147952;147953;147954;147955;147956;147957;147958;147959;147960;147961;147962;147963;147964;147965;147966;147967;147968;147969;147970;147971;147972;147973;147974;147975;147976;147977;147978;147979;147980;147981;147982;147983;147984;147985;147986;147987;147988;147989;147990;147991;147992;147993;147994;147995;147996;147997;147998;147999;148000;148001;148002;148003 117839;117840;117841;117842;117843;117844;117845;117846;117847;117848;117849;117850;117851;117852;117853;117854;117855;117856;117857;117858;117859;117860;117861;117862;117863;117864;117865;117866;117867;117868;117869;117870;117871;117872;117873;117874;117875;117876;117877;117878;117879;117880;117881;117882;117883;117884;117885;117886;117887;117888;117889;117890;117891;117892;117893;117894;117895;117896;117897 117862 52 GADFLVTEVENGGSLGSKK Unmodified 1906.9636 0.96362108 1000 P14618 PKM Pyruvate kinase PKM yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.85 2.71 1 1 11 1 1 1 1 1 1 1 1 1 1 1 1 1 77.026 76.625 3 2.5492E-31 88416 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 93.381 89.16 152050000 0 4084900 5416700 2645300 4494300 0 8402500 6453100 7679500 12153000 18404000 36515000 4348200 7179500 34275000 17662 1000 16087 148004;148005;148006;148007;148008;148009;148010;148011;148012;148013;148014;148015;148016 117898;117899;117900;117901;117902;117903;117904;117905;117906;117907;117908;117909 117902 12 GADHSSAPPADGDDEEMMATEVTPSAMAELTDLGK Unmodified 3545.512 0.51200891 4491 Q9HAV4 XPO5 Exportin-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 93.056 87.886 3 1.4457E-42 110769 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.858 85.751 52635000 27249000 22317000 3069400 0 0 0 0 0 0 0 0 0 0 0 0 17663 4491 16088 148017;148018;148019 117910;117911 117911 2 GADHSSAPPADGDDEEMMATEVTPSAMAELTDLGK Oxidation (M) 3561.5069 0.50692353 4491 Q9HAV4 XPO5 Exportin-5 yes yes 0 1 0 By MS/MS 2 0 1 1 91.038 82.908 3 2.9571E-19 107610 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.283 59.402 13201000 13201000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17664 4491 16088 148020 117912 117912 5926 1 GADIDALCVAPR Unmodified 1256.6183 0.6183208 1644;4213 P51003;Q9BWT3 PAPOLA;PAPOLG Poly(A) polymerase alpha;Poly(A) polymerase gamma no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.471 64.56 2 0.00027515 73861 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 83 65.564 78328000 0 0 0 4380400 3278000 7096000 4505500 5622700 3979700 5945100 9033100 8184900 8064000 6061200 12178000 17665 1644;4213 16089 148021;148022;148023;148024;148025;148026;148027;148028;148029;148030;148031;148032 117913;117914;117915;117916;117917;117918;117919;117920;117921;117922;117923;117924 117918 12 GADIDAVDIK Unmodified 1015.5186 0.51858998 1112 P20749 BCL3 B-cell lymphoma 3 protein yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 48.9 49.213 2 0.011712 55645 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 53.756 27.063 29324000 0 0 0 0 0 0 9097200 0 6805400 0 0 0 0 0 13422000 17666 1112 16090 148033;148034;148035 117925;117926;117927 117925 3 GADINAPDK Unmodified 899.43486 0.43486035 1803 P58546 MTPN Myotrophin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By matching 7.64 3.73 1 3 10 1 2 1 1 1 1 1 1 1 1 1 1 1 15.861 15.195 2 0.0030604 15366 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 91.853 54.126 419740000 48269000 56914000 4206000 6419100 5584800 9051100 12165000 9497300 6202400 15751000 54319000 57626000 0 0 133740000 17667 1803 16091 148036;148037;148038;148039;148040;148041;148042;148043;148044;148045;148046;148047;148048;148049 117928;117929;117930;117931;117932;117933;117934;117935;117936;117937;117938;117939 117939 12 GADLIEEAASR Unmodified 1130.5568 0.5567664 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 52.893 52.981 2 0.0022529 59844 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 68.557 50.522 227070000 0 0 0 11471000 7166200 32359000 9229700 0 18308000 29134000 26184000 0 31759000 13957000 47497000 17668 2193 16092 148050;148051;148052;148053;148054;148055;148056;148057;148058;148059 117940;117941;117942;117943;117944;117945;117946;117947;117948;117949 117947 9 GADLVVIEGMGR Oxidation (M) 1231.6231 0.62307182 4666 Q9NVE7 PANK4 Pantothenate kinase 4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 2 1 1 59.592 59.562 2 0.0024975 67327 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 59.426 33.487 85977000 0 0 0 26449000 0 35800000 4142200 0 0 0 0 0 8786200 10800000 0 17669 4666 16093 148060;148061;148062;148063;148064;148065 117950;117951;117952 117950 6077 3 GADLVVIEGMGR Unmodified 1215.6282 0.6281572 4666 Q9NVE7 PANK4 Pantothenate kinase 4 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 75.897 75.715 2 0.0027969 87387 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 73.067 56.291 94752000 0 0 0 0 36935000 57817000 0 0 0 0 0 0 0 0 0 17670 4666 16093 148066;148067 117953 117953 1 GADMSVPDEK Unmodified 1047.4543 0.45427516 4825 Q9P2R3 ANKFY1 Rabankyrin-5 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 27.985 28.49 2 0.0065358 29739 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.654 49.984 12153000 0 0 0 0 0 0 0 0 0 0 0 0 0 4298900 7853700 17671 4825 16094 148068;148069 117954;117955 117954 2 GADNDGSGSESGYTTPK Unmodified 1641.6754 0.67543756 3091 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.852 19.048 2 4.6881E-05 19205 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 95.018 91.001 56594000 0 0 0 4242400 2624600 3510000 4097400 3362200 3752600 6974300 4390900 6090900 4990600 3482600 9075300 17672 3091 16095 148070;148071;148072;148073;148074;148075;148076;148077;148078;148079;148080;148081 117956;117957;117958;117959;117960;117961;117962;117963;117964;117965;117966;117967;117968 117964 13 GADQNEMDISK Unmodified 1206.5187 0.51866633 2195 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.822 24.027 2 0.0035092 24272 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.734 40.306 36994000 0 0 0 2202200 1673500 2732700 1942900 2030200 1825700 3715000 3900700 3656500 4134100 3410600 5769700 17673 2195 16096 148082;148083;148084;148085;148086;148087;148088;148089;148090;148091;148092;148093 117969;117970;117971;117972;117973;117974;117975;117976;117977;117978;117979;117980 117972 11 GADQNEMDISK Oxidation (M) 1222.5136 0.51358095 2195 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 10.179 10.33 2 0.0096366 9087 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 45.368 36.505 9666900 0 0 0 0 933040 0 1239800 867590 1059100 0 0 1949000 1502400 0 2115900 17674 2195 16096 148094;148095;148096;148097;148098;148099;148100 117981 117981 3563 1 GADSAYYQVGQTGK Unmodified 1443.663 0.66302238 5104 Q9Y2I7 PIKFYVE 1-phosphatidylinositol 3-phosphate 5-kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 35.882 36.394 2 0.010042 39932 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 51.092 42.56 9353700 0 0 0 0 0 0 0 0 0 0 2556400 0 2648100 0 4149300 17675 5104 16097 148101;148102;148103 117982;117983 117982 2 GADTAPTLAPEALPSQGEVER Unmodified 2108.0386 0.038576936 3296 Q8IZL8 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 70.677 70.747 2;3 1.7632E-37 80734 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 130.24 121.19 254200000 0 0 0 12627000 13428000 18637000 16057000 13444000 12856000 15665000 19319000 30911000 26781000 32013000 42463000 17676 3296 16098 148104;148105;148106;148107;148108;148109;148110;148111;148112;148113;148114;148115;148116;148117;148118;148119;148120;148121;148122;148123;148124;148125;148126;148127 117984;117985;117986;117987;117988;117989;117990;117991;117992;117993;117994;117995;117996;117997;117998 117989 14 GADVNAPPVPSSR Unmodified 1265.6364 0.6364137 472;3250 Q8IWZ3;O75179 ANKHD1;ANKRD17 Ankyrin repeat and KH domain-containing protein 1;Ankyrin repeat domain-containing protein 17 no no 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.927 38.108 2 2.796E-13 42359 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 138.36 103.14 452630000 0 0 0 21337000 20883000 30158000 34334000 40153000 27994000 36860000 51114000 47672000 37544000 34740000 69843000 17677 3250;472 16099 148128;148129;148130;148131;148132;148133;148134;148135;148136;148137;148138;148139 117999;118000;118001;118002;118003;118004;118005;118006;118007;118008;118009;118010 118008 12 GADVNAPPVPSSRDTALTIAADK Unmodified 2265.1601 0.16008906 472;3250 Q8IWZ3;O75179 ANKHD1;ANKRD17 Ankyrin repeat and KH domain-containing protein 1;Ankyrin repeat domain-containing protein 17 no no 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 73.907 68.752 3 1.3233E-06 86338 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.871 51.943 68767000 0 68767000 0 0 0 0 0 0 0 0 0 0 0 0 0 17678 3250;472 16100 148140;148141 118011;118012 118011 2 GADVWFK Unmodified 821.40719 0.40718903 797 P05109 S100A8 Protein S100-A8;Protein S100-A8, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.487 56.612 2 0.027168 64356 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 77.748 67.564 2020000000 0 0 0 1064000000 63809000 83125000 61423000 112980000 45453000 99762000 166700000 87923000 113510000 62600000 58683000 17679 797 16101 148142;148143;148144;148145;148146;148147;148148;148149;148150;148151;148152;148153 118013;118014;118015 118013 3 GAEAANVTGPDGVPVEGSR Unmodified 1781.8544 0.85440498 1044 P16989 YBX3 Y-box-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 31 2 3 2 2 3 2 3 3 3 3 3 2 48.886 49.058 2;3 2.9026E-158 55381 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 254.1 230.35 3688100000 0 0 0 234220000 257840000 268630000 259710000 195990000 193530000 295910000 399360000 486550000 393790000 327030000 375500000 17680 1044 16102 148154;148155;148156;148157;148158;148159;148160;148161;148162;148163;148164;148165;148166;148167;148168;148169;148170;148171;148172;148173;148174;148175;148176;148177;148178;148179;148180;148181;148182;148183;148184 118016;118017;118018;118019;118020;118021;118022;118023;118024;118025;118026;118027;118028;118029;118030;118031;118032;118033;118034 118023 18 GAEAANVTGPGGVPVQGSK Unmodified 1694.8588 0.85876208 1955 P67809 YBX1 Nuclease-sensitive element-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.22 2 2 2 24 3 3 2 2 2 2 2 2 2 2 2 2 2 2 47.992 47.556 2;3 9.6717E-163 92667 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 228.25 210.78 10536000000 101300000 93149000 0 561010000 780890000 621540000 681770000 518160000 577140000 728960000 940930000 1686900000 1005300000 916400000 1322700000 17681 1955 16103 148185;148186;148187;148188;148189;148190;148191;148192;148193;148194;148195;148196;148197;148198;148199;148200;148201;148202;148203;148204;148205;148206;148207;148208;148209;148210;148211;148212;148213;148214 118035;118036;118037;118038;118039;118040;118041;118042;118043;118044;118045;118046;118047;118048;118049;118050;118051;118052;118053;118054;118055;118056;118057;118058;118059;118060;118061;118062;118063;118064;118065;118066;118067;118068;118069;118070;118071;118072;118073;118074;118075;118076;118077 118052 38 GAEADQIIEYLK Unmodified 1348.6874 0.68744622 2205 Q12904 AIMP1 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1;Endothelial monocyte-activating polypeptide 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 83.202 82.085 2 7.6762E-27 101897 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 182.64 152.97 1631400000 39784000 1315700000 24448000 4094900 7944000 16884000 7915400 14077000 11579000 21735000 23522000 26615000 12639000 25597000 78853000 17682 2205 16104 148215;148216;148217;148218;148219;148220;148221;148222;148223;148224;148225;148226;148227;148228;148229;148230 118078;118079;118080;118081;118082;118083;118084;118085;118086;118087;118088;118089 118081 12 GAEASAASEEEAGPQATEPSTPSGPESGPTPASAEQNE Unmodified 3624.5459 0.54594612 1557 P49006 MARCKSL1 MARCKS-related protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.71 3.15 3 18 2 1 1 2 1 1 1 1 1 2 2 2 2 2 59.083 59.755 3;4 5.1102E-243 63224 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 183.92 178.81 672880000 201460000 0 0 17115000 26510000 18082000 16978000 23174000 14866000 54904000 112720000 75076000 25475000 39250000 47270000 17683 1557 16105 148231;148232;148233;148234;148235;148236;148237;148238;148239;148240;148241;148242;148243;148244;148245;148246;148247;148248;148249;148250;148251 118090;118091;118092;118093;118094;118095;118096;118097;118098;118099;118100;118101;118102;118103;118104;118105;118106;118107;118108;118109;118110;118111 118096 21 GAEEEPPPPLQAVLVADSFDRR Unmodified 2392.2023 0.20228822 2241 Q13144 EIF2B5 Translation initiation factor eIF-2B subunit epsilon yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 90.146 90.267 3 0.012189 104536 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 21.901 16.692 17227000 0 0 0 0 0 1439500 0 0 0 2811300 2059400 2769200 0 1778900 6368300 17684 2241 16106 148252;148253;148254;148255;148256;148257 118112;118113 118112 2 GAEEMETVIPVDVMR 2 Oxidation (M) 1706.7855 0.78552206 4015 Q99497 PARK7 Protein deglycase DJ-1 yes yes 0 2 0 By MS/MS By MS/MS 2 0 2 1 1 70.547 65.844 2 1.5155E-22 83608 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.01 102.8 153070000 0 149580000 3489200 0 0 0 0 0 0 0 0 0 0 0 0 17685 4015 16107 148258;148259 118114 118114 5514;5515 1 GAEEMETVIPVDVMR Oxidation (M) 1690.7906 0.79060744 4015 Q99497 PARK7 Protein deglycase DJ-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.64 3.88 5 1 8 2 3 1 2 1 1 2 2 79.424 77.186 2 1.7912E-07 89635 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 89.403 73.832 692630000 23067000 486460000 4424800 5949400 0 0 0 0 0 0 12063000 17077000 0 28071000 115520000 17686 4015 16107 148260;148261;148262;148263;148264;148265;148266;148267;148268;148269;148270;148271;148272;148273 118115;118116;118117;118118;118119;118120;118121;118122;118123;118124;118125 118124 5514;5515 11 GAEEMETVIPVDVMR Unmodified 1674.7957 0.79569281 4015 Q99497 PARK7 Protein deglycase DJ-1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 88.144 84.101 2 2.7411E-56 104480 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 169.52 144.13 725060000 0 725060000 0 0 0 0 0 0 0 0 0 0 0 0 0 17687 4015 16107 148274;148275 118126;118127;118128 118126 3 GAEEMETVIPVDVMRR Oxidation (M) 1846.8917 0.89171846 4015 Q99497 PARK7 Protein deglycase DJ-1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 5.64 3.98 6 5 2 2 2 1 1 1 2 74.66 71.924 3 1.7468E-06 88703 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 99.566 88.951 281690000 49968000 62073000 102640000 0 0 0 0 1627800 0 0 8891900 0 0 6147900 50341000 17688 4015 16108 148276;148277;148278;148279;148280;148281;148282;148283;148284;148285;148286 118129;118130;118131;118132;118133;118134;118135;118136;118137;118138;118139 118139 5514;5515 9 GAEEMETVIPVDVMRR Unmodified 1830.8968 0.89680384 4015 Q99497 PARK7 Protein deglycase DJ-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 84.025 79.373 3 1.0653E-05 101001 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.836 86.982 156750000 38301000 82221000 36226000 0 0 0 0 0 0 0 0 0 0 0 0 17689 4015 16108 148287;148288;148289;148290 118140;118141;118142;118143 118142 4 GAEEMETVIPVDVMRR 2 Oxidation (M) 1862.8866 0.88663309 4015 Q99497 PARK7 Protein deglycase DJ-1 yes yes 0 2 1 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 60.761 58.587 3 0.00017533 66260 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 53.3 49.322 102980000 20442000 16031000 0 0 0 2465200 0 0 0 0 27455000 24383000 0 12203000 0 17690 4015 16108 148291;148292;148293;148294;148295;148296 118144;118145;118146;118147 118147 5514;5515 4 GAEEMETVIPVDVMRRAGIK Oxidation (M) 2216.1293 0.12932297 4015 Q99497 PARK7 Protein deglycase DJ-1 yes yes 0 1 2 By MS/MS 2 0 1 1 84.972 76.841 4 9.9542E-05 100308 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.278 38.35 28407000 28407000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17691 4015 16109 148297 118148;118149 118149 5514;5515 2 GAEEMETVIPVDVMRRAGIK Unmodified 2200.1344 0.13440835 4015 Q99497 PARK7 Protein deglycase DJ-1 yes yes 0 0 2 By MS/MS 2 0 2 2 90.1 81.969 3;4 0.025831 106437 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 23.172 14.782 25569000 25569000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17692 4015 16109 148298;148299 118150;118151 118150 2 GAEGIEEHTRPR Unmodified 1350.664 0.66402543 3078 Q7Z333 SETX Probable helicase senataxin yes yes 0 0 1 By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.671 13.833 3 0.0070517 12531 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.327 18.996 68900000 0 0 0 4166000 3826200 3898100 3146400 5030500 2851500 5070000 3796600 12200000 5470800 4283600 15160000 17693 3078 16110 148300;148301;148302;148303;148304;148305;148306;148307;148308;148309;148310;148311 118152 118152 1 GAEGILAPQPPPPQQHQERPGAAAIGSAR Unmodified 2900.5005 0.50053593 3576 Q8WWM7 ATXN2L Ataxin-2-like protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 56.981 57.301 4 0.00021891 65034 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 27.143 20.98 59299000 0 0 0 0 0 0 10193000 0 7734400 8428900 0 14969000 0 0 17974000 17694 3576 16111 148312;148313;148314;148315;148316 118153 118153 1 GAEIEYAMAYSK Unmodified 1331.6068 0.60675306 3717 Q969H8 MYDGF Myeloid-derived growth factor yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 62.025 62.546 2 0.024761 70562 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.981 35.944 21597000 0 0 0 0 0 0 0 0 0 0 0 5470800 0 0 16126000 17695 3717 16112 148317;148318 118154 118154 1 GAEIINPK Unmodified 840.47052 0.47051757 2456 Q14966 ZNF638 Zinc finger protein 638 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 26.351 26.658 2 0.0092881 28662 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 83.377 36.713 64517000 0 0 0 5465200 0 0 6741800 0 0 9144300 7365700 9936600 10354000 6404200 9105200 17696 2456 16113 148319;148320;148321;148322;148323;148324;148325;148326 118155;118156;118157;118158;118159 118159 5 GAEISEENSEGGLHVDLAQIIEACDVCLK Unmodified 3155.4751 0.47509354 3046 Q7L2H7 EIF3M Eukaryotic translation initiation factor 3 subunit M yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 96.659 92.223 3 7.315E-216 115096 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 217.84 201.18 127000000 95181000 29212000 2606100 0 0 0 0 0 0 0 0 0 0 0 0 17697 3046 16114 148327;148328;148329;148330;148331 118160;118161;118162;118163;118164 118164 5 GAELLLGDQPDLIGSLDGGAK Unmodified 2038.0582 0.058249746 2180 Q10571 MN1 Probable tumor suppressor protein MN1 yes yes 0 0 0 By MS/MS 2 0 1 1 95.2 90.335 2 0.0040626 112028 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 43.69 28.303 13741000 0 13741000 0 0 0 0 0 0 0 0 0 0 0 0 0 17698 2180 16115 148332 118165 118165 1 GAELPREPSEAPITFDADSFLNYFDK Unmodified 2928.3818 0.38176873 705 O95905 ECD Protein SGT1 yes yes 0 0 1 By MS/MS 2 0 2 2 98.91 90.78 3 3.3726E-38 117092 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.774 82.611 48223000 48223000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17699 705 16116 148333;148334 118166;118167 118166 2 GAELQPSRPTSLSQDSPR Unmodified 1924.9603 0.96026704 341 O43548 TGM5 Protein-glutamine gamma-glutamyltransferase 5 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 41.662 41.487 3 1.1568E-05 46298 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 71.697 44.548 19417000 0 0 0 7229400 0 0 0 12188000 0 0 0 0 0 0 0 17700 341 16117 148335;148336 118168;118169;118170 118168 3 GAEPETGSAVSAAQCQVGPTR Unmodified 2071.9593 0.95928076 4916 Q9UI10 EIF2B4 Translation initiation factor eIF-2B subunit delta yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 45.513 45.67 2 3.1832E-08 50447 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.534 66.855 23689000 0 0 0 0 3569500 2525700 2922100 0 0 4123000 4200700 0 0 0 6347600 17701 4916 16118 148337;148338;148339;148340;148341;148342 118171;118172 118171 2 GAEPETGSAVSAAQCQVGPTRELPESGIQLGTPREK Unmodified 3706.8221 0.82206558 4916 Q9UI10 EIF2B4 Translation initiation factor eIF-2B subunit delta yes yes 0 0 2 By MS/MS 2 0 1 1 75.189 72.341 4 3.423E-11 88266 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 47.006 42.291 5867400 0 0 5867400 0 0 0 0 0 0 0 0 0 0 0 0 17702 4916 16119 148343 118173 118173 1 GAEPSGGAARGPVGK Unmodified 1309.6739 0.67386184 179 O00762 UBE2C Ubiquitin-conjugating enzyme E2 C yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 14.8 11.977 2;3 0.0047518 15864 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.159 47.636 109630000 0 53157000 56473000 0 0 0 0 0 0 0 0 0 0 0 0 17703 179 16120 148344;148345;148346 118174;118175;118176 118175 3 GAEQDNPNQYSWGENYAGSSGLMSASPELGPAQR Oxidation (M) 3583.5546 0.5546175 4666 Q9NVE7 PANK4 Pantothenate kinase 4 yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 78.191 78.034 3 1.8751E-50 90121 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 82.492 80.68 49758000 0 0 0 0 32113000 17645000 0 0 0 0 0 0 0 0 0 17704 4666 16121 148347;148348 118177;118178;118179 118179 6078 3 GAEQLAEGGR Unmodified 986.47812 0.47812215 2168 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.663 18.86 2 9.75E-10 19298 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 151.97 125.75 665490000 0 0 0 50130000 43311000 57222000 40153000 30729000 38951000 64444000 63128000 84875000 59537000 43988000 89021000 17705 2168 16122 148349;148350;148351;148352;148353;148354;148355;148356;148357;148358;148359;148360 118180;118181;118182;118183;118184;118185;118186;118187;118188;118189;118190;118191 118182 8 GAEVEDLR Unmodified 887.43486 0.43486035 378 O43896 KIF1C Kinesin-like protein KIF1C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 25.85 26.1 2 0.013906 27662 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 71.342 28.276 51627000 0 0 0 3662600 3953400 0 0 3874200 0 5879800 6827400 10069000 6484000 4090100 6786900 17706 378 16123 148361;148362;148363;148364;148365;148366;148367;148368;148369 118192;118193;118194;118195;118196;118197;118198;118199;118200 118197 9 GAEVEDLRAHIDK Unmodified 1451.7369 0.73685603 378 O43896 KIF1C Kinesin-like protein KIF1C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.12 42.297 3 0.010667 46090 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.275 14.059 123370000 0 0 0 6395300 5142700 11218000 10097000 7981300 8320900 13691000 10043000 15439000 12891000 5897800 16253000 17707 378 16124 148370;148371;148372;148373;148374;148375;148376;148377;148378;148379;148380;148381 118201;118202;118203 118202 3 GAEVNAVTSNR Unmodified 1116.5523 0.55234972 2097 Q03468 ERCC6 DNA excision repair protein ERCC-6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 2 1 1 1 1 1 1 1 1 1 1 1 19.35 19.52 2 1.0396E-05 19953 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 138.66 85.493 175120000 0 0 0 19451000 12066000 14162000 11706000 10222000 9371800 18353000 15119000 15410000 17635000 13660000 17967000 17708 2097 16125 148382;148383;148384;148385;148386;148387;148388;148389;148390;148391;148392;148393;148394 118204;118205;118206;118207;118208;118209;118210;118211;118212;118213;118214;118215 118205 11 GAEYVSAR Unmodified 851.41373 0.41373097 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 15.121 15.253 2 0.013906 14978 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 71.342 33.734 172830000 0 0 0 8867700 11151000 12452000 16510000 13827000 8434000 22118000 24042000 0 27916000 0 27513000 17709 516 16126 148395;148396;148397;148398;148399;148400;148401;148402;148403;148404 118216;118217;118218;118219;118220;118221;118222;118223;118224;118225 118223 10 GAFASLSELHCDK Unmodified 1433.6609 0.66091389 89 CON__Q3SX09 yes yes 0 0 0 By MS/MS 2 0 1 1 69.085 60.79 3 0.0069155 81249 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.088 40.555 + 11165000 11165000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17710 89 16127 148405 118226 118226 1 GAFCNGQK Unmodified 880.38614 0.38613602 1244 P29218 IMPA1 Inositol monophosphatase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 8.5005 5.3825 2 0.021687 7044 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 84.359 75.676 208340000 32652000 174140000 1553600 0 0 0 0 0 0 0 0 0 0 0 0 17711 1244 16128 148406;148407;148408;148409 118227;118228 118227 2 GAFFMDEDEEVYK Oxidation (M) 1594.6497 0.64974008 1756 P55081 MFAP1 Microfibrillar-associated protein 1 yes yes 0 1 0 By matching By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 67.519 67.408 2 0.0087318 77424 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 41.54 33.894 11466000 0 0 0 1347000 0 4634400 0 0 0 3163400 0 0 2321300 0 0 17712 1756 16129 148410;148411;148412;148413 118229 118229 2875 1 GAFGDMLDTPDPYVELFISTTPDSRK Oxidation (M) 2887.3586 0.35859045 1522 P47712 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase yes yes 0 1 1 By MS/MS 2 0 1 1 97.726 89.595 3 2.3362E-26 115669 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.565 92.201 34469000 34469000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17713 1522 16130 148414 118230 118230 2417 1 GAFGEVAVVK Unmodified 975.53893 0.53893149 5247;2809 Q9Y5S2;Q5VT25 CDC42BPB;CDC42BPA Serine/threonine-protein kinase MRCK beta;Serine/threonine-protein kinase MRCK alpha no no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 55.213 55.301 2 0.008406 62415 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 60.118 6.564 67970000 0 0 0 4797200 5149600 0 5678800 6836600 4236000 7762400 8514700 0 6956300 6239900 11799000 17714 5247;2809 16131 148415;148416;148417;148418;148419;148420;148421;148422;148423;148424 118231;118232;118233;118234 118232 4 GAFGKPQGTVAR Unmodified 1187.6411 0.64110515 1220 P27635;Q96L21 RPL10;RPL10L 60S ribosomal protein L10;60S ribosomal protein L10-like yes no 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 1 2 2 2 1 1 2 2 2 2 21.53 21.732 2;3 0.00069813 21410 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.176 61.521 1810400000 0 0 0 108440000 12958000 111450000 131290000 134790000 60580000 175240000 145480000 265330000 268830000 146220000 249840000 17715 1220 16132 148425;148426;148427;148428;148429;148430;148431;148432;148433;148434;148435;148436;148437;148438;148439;148440;148441;148442;148443;148444;148445 118235;118236;118237;118238;118239;118240;118241;118242;118243;118244;118245;118246 118238 8 GAFGVGQEQIDAFLK Unmodified 1578.8042 0.80420731 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 88.668 87.715 2 2.6235E-10 109202 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 139.86 121.8 56333000 0 41501000 1436400 0 0 0 0 0 0 3652300 1617800 1388400 0 1081400 5655000 17716 19 16133 148446;148447;148448;148449;148450;148451;148452 118247;118248;118249 118248 3 GAFQTGQGPLDAQVK Unmodified 1515.7682 0.76815616 4584 Q9NR09 BIRC6 Baculoviral IAP repeat-containing protein 6 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 56.852 56.974 2 0.0013082 63876 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.426 35.436 24185000 0 0 0 0 3335700 0 3892900 0 0 0 0 0 3854800 4398500 8702600 17717 4584 16134 148453;148454;148455;148456;148457;148458;148459 118250;118251;118252;118253;118254 118252 5 GAFRSSEEQQQDVSEFTHK Unmodified 2209.0036 0.0035884131 3978 Q96RU2 USP28 Ubiquitin carboxyl-terminal hydrolase 28 yes yes 0 0 1 By MS/MS 2 0 1 1 50.762 42.862 3 7.4254E-15 59207 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 106.67 89.981 9795700 9795700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17718 3978 16135 148460 118255 118255 1 GAFSEEYK Unmodified 929.41306 0.41306227 888 P09543 CNP 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 27.607 27.85 2 0.03731 29606 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 51.43 26.579 157570000 0 0 0 11013000 16528000 0 0 16841000 11608000 0 20885000 24864000 18859000 15952000 21019000 17719 888 16136 148461;148462;148463;148464;148465;148466;148467;148468;148469 118256;118257 118256 2 GAFSRLDPTGTFEK Unmodified 1524.7573 0.75725712 2628 Q16698 DECR1 2,4-dienoyl-CoA reductase, mitochondrial yes yes 0 0 1 By MS/MS 2 0 1 1 75.038 66.907 3 0.00039342 88444 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.887 45.081 13212000 13212000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17720 2628 16137 148470 118258 118258 1 GAFSSVSMSGGAGR Oxidation (M) 1285.5721 0.57209888 77 CON__P19013;P19013 KRT4 Keratin, type II cytoskeletal 4 yes no 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 28.772 28.952 2 1.2329E-16 31220 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 121.36 81.442 + 56970000 0 0 0 0 0 0 20806000 25626000 0 0 0 0 10537000 0 0 17721 77 16138 148471;148472;148473 118259;118260;118261;118262 118259 109 4 GAFSSVSMSGGAGR Unmodified 1269.5772 0.57718426 77 CON__P19013;P19013 KRT4 Keratin, type II cytoskeletal 4 yes no 0 0 0 By MS/MS 10 0 1 1 43.944 44.113 2 0.012949 49462 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 48.188 16.048 + 13433000 0 0 0 0 0 0 0 13433000 0 0 0 0 0 0 0 17722 77 16138 148474 118263 118263 1 GAGATLEHQQEISK Unmodified 1467.7318 0.73177065 5247 Q9Y5S2 CDC42BPB Serine/threonine-protein kinase MRCK beta yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 22.95 23.145 3 0.048214 24271 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 26.771 19.239 85286000 0 0 0 5703200 4863100 7629900 6164900 4617300 3409100 12087000 6760000 13628000 9140600 0 11282000 17723 5247 16139 148475;148476;148477;148478;148479;148480;148481;148482;148483;148484;148485 118264 118264 1 GAGDGSDEEVDGK Unmodified 1234.495 0.494954 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.31 2.4 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 19.412 20.096 2 7.6941E-09 6158 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 136.96 120.76 95117000 17939000 0 0 9228700 0 9449500 10499000 5878800 8819300 11226000 0 0 12948000 0 9128300 17724 1356 16140 148486;148487;148488;148489;148490;148491;148492;148493;148494;148495;148496;148497;148498 118265;118266;118267;118268;118269;118270;118271;118272;118273;118274;118275;118276 118271 12 GAGDGSDEEVDGKADGAEAKPAE Unmodified 2173.9247 0.92472897 1356 P35579 MYH9 Myosin-9 yes yes 0 0 2 By MS/MS 10 0 1 1 23.493 24.166 3 0.025914 25034 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 40.756 39.995 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17725 1356 16141 148499 118277 118277 1 GAGDLSLREPPASALPGSQAADSDREDAAVAR Unmodified 3149.5337 0.53374613 3691 Q92966 SNAPC3 snRNA-activating protein complex subunit 3 yes yes 0 0 2 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 67.948 68.175 4 2.0213E-15 78211 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 45.983 40.141 69078000 0 0 0 0 0 9945800 0 7243000 0 8508400 6572300 7213400 6266000 7780500 15549000 17726 3691 16142 148500;148501;148502;148503;148504;148505;148506;148507 118278;118279;118280;118281;118282;118283;118284;118285 118285 8 GAGEMLEDGSER Unmodified 1249.5245 0.52447999 3794 Q96DE5 ANAPC16 Anaphase-promoting complex subunit 16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 30.713 31.018 2 0.014734 33817 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 51.927 37.258 44036000 0 0 0 0 3378300 0 3569100 0 0 0 6459900 13761000 0 6117000 10751000 17727 3794 16143 148508;148509;148510;148511;148512;148513 118286;118287;118288;118289 118286 4 GAGEMLEDGSER Oxidation (M) 1265.5194 0.51939461 3794 Q96DE5 ANAPC16 Anaphase-promoting complex subunit 16 yes yes 0 1 0 By MS/MS 10 0 1 1 17.23 17.511 2 0.025434 17618 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 50.194 32.955 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17728 3794 16143 148514 118290 118290 1 GAGFNQNNGAGSENFGLGVVPVSASPSSVEVHPVLEK Unmodified 3650.7965 0.79650276 3120 Q7Z739 YTHDF3 YTH domain-containing family protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 5 2 1 2 86.052 86.188 3;4 2.9922E-15 99622 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.318 38.676 55150000 0 0 0 0 0 0 0 0 0 24290000 0 2854300 0 0 28006000 17729 3120 16144 148515;148516;148517;148518;148519 118291;118292;118293;118294 118293 4 GAGGALLTPK Unmodified 883.51272 0.51271674 3312 Q8N1G0 ZNF687 Zinc finger protein 687 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 36.302 35.386 2 0.016128 39250 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 49.715 30.079 87726000 10459000 24778000 0 3648800 4210000 0 4877000 0 5746300 7112500 5879500 6051800 6608300 0 8354200 17730 3312 16145 148520;148521;148522;148523;148524;148525;148526;148527;148528;148529;148530 118295;118296 118295 1 GAGGEDLIMLDIYAIEELRAR Oxidation (M) 2320.1733 0.17329628 1578 P49588 AARS Alanine--tRNA ligase, cytoplasmic yes yes 0 1 1 By MS/MS By MS/MS 3 0 2 1 1 98.333 94.894 3 8.803E-08 98402 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 73.21 59.338 10046000 6956700 3088900 0 0 0 0 0 0 0 0 0 0 0 0 0 17731 1578 16146 148531;148532 118297 118297 2531 1 GAGGEDLIMLDIYAIEELRAR Unmodified 2304.1784 0.17838166 1578 P49588 AARS Alanine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS 2 0 1 1 100.94 92.813 3 2.7725E-13 119500 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.384 77.83 21349000 21349000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17732 1578 16146 148533 118298 118298 1 GAGGEDLIMLDIYAIEELRARGLEVTDDSPK Oxidation (M) 3361.6712 0.67115081 1578 P49588 AARS Alanine--tRNA ligase, cytoplasmic yes yes 0 1 2 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 100.77 95.309 4 7.0048E-79 118027 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.74 116.11 102380000 25677000 76704000 0 0 0 0 0 0 0 0 0 0 0 0 0 17733 1578 16147 148534;148535;148536 118299;118300 118299 2531 2 GAGGEDLIMLDIYAIEELRARGLEVTDDSPK Unmodified 3345.6762 0.67623619 1578 P49588 AARS Alanine--tRNA ligase, cytoplasmic yes yes 0 0 2 By MS/MS By MS/MS 2.5 0.5 2 2 2 2 100.36 95.41 4 9.524E-58 119412 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 108.5 103.54 315170000 275890000 39278000 0 0 0 0 0 0 0 0 0 0 0 0 0 17734 1578 16147 148537;148538;148539;148540 118301;118302;118303 118303 3 GAGGFGGGGGTR Unmodified 949.43659 0.43659168 3162 Q86V81 ALYREF THO complex subunit 4 yes yes 0 0 0 By MS/MS 10 0 1 1 10.606 11.052 2 0.027265 9555 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 37.696 14.677 1819600 0 0 0 0 0 0 0 0 0 0 1819600 0 0 0 0 17735 3162 16148 148541 118304 118304 1 GAGHMVPTDK Unmodified 1011.4808 0.48076468 925 P10619 CTSA Lysosomal protective protein;Lysosomal protective protein 32 kDa chain;Lysosomal protective protein 20 kDa chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 15.843 12.546 2 0.012815 18488 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.425 53.39 45785000 20162000 19975000 5647400 0 0 0 0 0 0 0 0 0 0 0 0 17736 925 16149 148542;148543;148544 118305;118306 118305 2 GAGHMVPTDK Oxidation (M) 1027.4757 0.4756793 925 P10619 CTSA Lysosomal protective protein;Lysosomal protective protein 32 kDa chain;Lysosomal protective protein 20 kDa chain yes yes 0 1 0 By matching By MS/MS By MS/MS 2 0 3 1 1 1 7.8424 4.8046 2 0.0047286 6797 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 85.676 66.893 33428000 10591000 12769000 10067000 0 0 0 0 0 0 0 0 0 0 0 0 17737 925 16149 148545;148546;148547 118307 118307 1189 1 GAGIEIYPGSQCTLSDNGIHHCK Unmodified 2513.1427 0.14274121 3427 Q8NEM2 SHCBP1 SHC SH2 domain-binding protein 1 yes yes 0 0 0 By MS/MS 2 0 2 2 70.203 61.918 3;4 0.00012605 82481 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.19 59.504 39559000 39559000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17738 3427 16150 148548;148549 118308;118309 118308 2 GAGIGGLGITVEGPSESK Unmodified 1627.8417 0.84171503 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 75.291 75.468 2 1.1199E-15 87094 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 97.463 82.091 59891000 0 0 0 0 0 9355100 0 0 0 0 0 15698000 0 0 34838000 17739 487 16151 148550;148551;148552 118310 118310 1 GAGMAGPGGLAR Unmodified 1013.5076 0.50764813 1088 P19419 ELK1 ETS domain-containing protein Elk-1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 33.775 34.009 2 0.0056825 37443 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 53.493 41.772 68978000 0 0 0 0 5029600 5310000 0 7803200 4122300 9856200 0 10608000 6264600 7229300 12755000 17740 1088 16152 148553;148554;148555;148556;148557;148558;148559;148560;148561 118311;118312;118313 118312 3 GAGNNPEFEETRR Unmodified 1475.6753 0.6753184 4885 Q9UGP4 LIMD1 LIM domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 20.59 20.782 3 0.00018275 20974 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 70.089 56.41 181220000 0 0 0 11516000 7437200 9555300 10832000 13619000 8416000 15508000 19790000 31126000 0 14995000 38424000 17741 4885 16153 148562;148563;148564;148565;148566;148567;148568;148569;148570;148571;148572 118314;118315;118316;118317;118318;118319;118320;118321;118322;118323 118318 10 GAGNNVLVIDGQQK Unmodified 1411.7419 0.7419414 4862 Q9UBW7 ZMYM2 Zinc finger MYM-type protein 2 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS 8 3.46 1 3 1 1 1 1 49.503 48.481 2 3.0335E-09 61998 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.15 95.453 62980000 0 41410000 0 0 0 0 0 0 0 0 0 10268000 0 3827000 7475200 17742 4862 16154 148573;148574;148575;148576 118324;118325 118324 2 GAGNTSSLNPLAVGFVQTPPVISSAHIQDER Unmodified 3161.6105 0.61053989 4814 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 89.329 89.457 3 0.04898 103524 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 15.065 12.526 11087000 0 0 0 0 0 0 0 0 0 3925200 0 0 0 0 7161600 17743 4814 16155 148577;148578 118326 118326 1 GAGPGCYLAGSLTLSK Unmodified 1550.7763 0.776278 1243 P29144 TPP2 Tripeptidyl-peptidase 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 81.493 75.075 2 1.9966E-05 94892 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.803 75.198 41005000 16603000 24402000 0 0 0 0 0 0 0 0 0 0 0 0 0 17744 1243 16156 148579;148580 118327;118328;118329 118327 3 GAGPVPPGK Unmodified 778.43374 0.43373813 2289 Q13428 TCOF1 Treacle protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 14.58 14.851 2 0.031046 14557 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 47.916 26.931 68770000 0 0 0 0 0 0 5388100 5076700 0 8061700 9277000 11579000 8020900 7217100 14149000 17745 2289 16157 148581;148582;148583;148584;148585;148586;148587;148588 118330;118331;118332 118330 3 GAGSAMSTDAYPK Oxidation (M) 1270.55 0.54996646 683 O95721 SNAP29 Synaptosomal-associated protein 29 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 17.129 17.383 2 0.00080457 17565 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 64.297 58.194 29494000 0 0 0 2808500 0 1441200 0 0 1855000 2455900 3811300 6909400 3054100 2616100 4542400 17746 683 16158 148589;148590;148591;148592;148593;148594;148595;148596;148597 118333;118334;118335;118336;118337 118333 822 5 GAGSAMSTDAYPK Unmodified 1254.5551 0.55505184 683 O95721 SNAP29 Synaptosomal-associated protein 29 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 30.56 30.766 2 0.00078848 33425 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 84.17 71.133 94181000 0 0 0 4774600 4400100 0 4658800 5398600 4535800 9692100 12075000 17575000 8372300 6404000 16295000 17747 683 16158 148598;148599;148600;148601;148602;148603;148604;148605;148606;148607;148608 118338;118339;118340;118341;118342;118343;118344;118345 118338 8 GAGSAQPEPQHFQPK Unmodified 1577.7587 0.7586541 378 O43896 KIF1C Kinesin-like protein KIF1C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 26.698 26.916 3 0.0014014 28902 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 48.527 40.744 198750000 0 0 0 17215000 12279000 0 14518000 14024000 11888000 20764000 30028000 32411000 15386000 14790000 15444000 17748 378 16159 148609;148610;148611;148612;148613;148614;148615;148616;148617;148618;148619 118346;118347;118348;118349;118350;118351;118352;118353 118351 7 GAGSIAGASASPK Unmodified 1072.5513 0.55128709 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 19.075 19.298 2 4.0495E-11 19636 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 120.06 72.459 480540000 0 0 0 78302000 1194200 31659000 0 68911000 0 47706000 46725000 68321000 55958000 30976000 50792000 17749 1029 16160 148620;148621;148622;148623;148624;148625;148626;148627;148628;148629 118354;118355;118356;118357;118358;118359;118360;118361;118362;118363 118358 5 GAGSSAFSQSSGTLASNPATFQR Unmodified 2228.0458 0.045787579 901 P0CG12 CHTF8 Chromosome transmission fidelity protein 8 homolog isoform 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.067 65.154 3 0.0042873 74610 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 26.443 22.415 78509000 0 0 0 3965400 4188800 3950100 6157300 5697500 4078300 6765900 9827700 9490200 6744900 8339000 9304000 17750 901 16161 148630;148631;148632;148633;148634;148635;148636;148637;148638;148639;148640;148641 118364;118365;118366;118367;118368;118369;118370;118371;118372 118364 9 GAGTDDHTLIR Unmodified 1154.568 0.56799978 873 P08758 ANXA5 Annexin A5 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 1 2 1 2 1 1 2 2 1 2 2 22.764 23.029 2;3 0.00027177 24648 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 81.017 66.35 756520000 0 0 0 15672000 7797000 13889000 12181000 12687000 5939100 23808000 112140000 105960000 21074000 95879000 329500000 17751 873 16162 148642;148643;148644;148645;148646;148647;148648;148649;148650;148651;148652;148653;148654;148655;148656;148657;148658;148659 118373;118374;118375;118376;118377;118378;118379;118380;118381;118382;118383;118384 118375 9 GAGTDDSTLVR Unmodified 1090.5255 0.52546627 1100 P20073 ANXA7 Annexin A7 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 23.817 23.678 2 0.00028424 23845 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.178 56.783 566440000 0 32079000 0 35648000 18452000 52430000 33937000 25190000 16328000 59938000 65221000 52112000 40413000 44470000 90220000 17752 1100 16163 148660;148661;148662;148663;148664;148665;148666;148667;148668;148669;148670;148671;148672 118385;118386;118387;118388;118389;118390;118391;118392 118388 7 GAGTDEGCLIEILASR Unmodified 1660.809 0.80903469 887 P09525 ANXA4 Annexin A4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 88.716 88.87 2 0.00067555 103296 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 59.898 52.331 12856000 0 0 0 0 0 0 0 927050 1123300 1300900 1789900 2050400 0 1642100 4022600 17753 887 16164 148673;148674;148675;148676;148677;148678;148679 118393;118394;118395;118396;118397;118398;118399 118398 7 GAGTGGLGLAVEGPSEAK Unmodified 1569.7999 0.79985021 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 62.491 61.148 2 2.3345E-42 70142 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 180.28 168.22 1434300000 6491400 331650000 3134500 45500000 46464000 78961000 63586000 64079000 42332000 85917000 124700000 149610000 70106000 99062000 222670000 17754 1124 16165 148680;148681;148682;148683;148684;148685;148686;148687;148688;148689;148690;148691;148692;148693;148694;148695 118400;118401;118402;118403;118404;118405;118406;118407;118408;118409;118410;118411;118412;118413;118414;118415;118416;118417;118418;118419;118420;118421;118422;118423 118415 24 GAGTGGLGLTVEGPCEAK Unmodified 1672.809 0.80903469 487 O75369 FLNB Filamin-B no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.9 3.81 3 1 6 1 2 1 1 1 1 1 1 1 65.348 63.009 2 6.0816E-71 79641 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 171.2 138.25 669670000 12430000 610650000 4624300 5812300 5573000 8969100 7825800 9091400 4688800 0 0 0 0 0 0 17755 487 16166 148696;148697;148698;148699;148700;148701;148702;148703;148704;148705 118424;118425;118426;118427;118428;118429;118430;118431;118432;118433;118434 118427 11 GAGTNEDALIEILTTR Unmodified 1672.8632 0.86317875 968 P12429 ANXA3 Annexin A3 yes yes 0 0 0 By MS/MS 10 0 1 1 92.281 92.418 2 1.7024E-07 107007 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.814 72.656 4943200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4943200 17756 968 16167 148706 118435 118435 1 GAGVHSGERPPHSLSSNAR Unmodified 1914.9409 0.940869 2448 Q147X3 NAA30 N-alpha-acetyltransferase 30 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 1 1 1 1 1 2 4 3 1 17.152 17.421 3;4;5 7.1323E-13 16161 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 92.679 80.478 502200000 0 0 0 6657800 12175000 23518000 4297700 4626100 6690300 68257000 106340000 263030000 0 0 6618200 17757 2448 16168 148707;148708;148709;148710;148711;148712;148713;148714;148715;148716;148717;148718;148719;148720;148721;148722 118436;118437;118438;118439;118440;118441;118442;118443;118444 118443 3 GAGWLFGAK Unmodified 905.47594 0.4759373 176 O00743 PPP6C Serine/threonine-protein phosphatase 6 catalytic subunit;Serine/threonine-protein phosphatase 6 catalytic subunit, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 73.488 73.596 2 0.015568 84822 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 57.281 35.15 73950000 0 0 0 0 3157500 8966000 5725300 5259300 5245400 0 0 13169000 11277000 0 21150000 17758 176 16169 148723;148724;148725;148726;148727;148728;148729;148730 118445;118446;118447;118448;118449;118450 118448 6 GAHPSGGADDVAK Unmodified 1180.5473 0.54726434 2135 Q07065 CKAP4 Cytoskeleton-associated protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 8 3.33 2 2 11 4 1 1 1 1 1 1 1 1 1 1 1 7.1944 6.3963 2;3 0.0011522 5136 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 45.115 37.071 155710000 0 73421000 0 7541100 6055700 4353800 6361800 6523300 6609000 7745000 12739000 7804500 7085500 0 9468500 17759 2135 16170 148731;148732;148733;148734;148735;148736;148737;148738;148739;148740;148741;148742;148743;148744;148745 118451;118452;118453;118454;118455;118456;118457;118458;118459;118460;118461;118462 118458 12 GAHYCVPCYENK Unmodified 1496.6177 0.61766887 2338 Q13643 FHL3 Four and a half LIM domains protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 43.102 37.48 2;3 0.0078302 51223 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.979 48.938 69904000 49214000 13116000 7573900 0 0 0 0 0 0 0 0 0 0 0 0 17760 2338 16171 148746;148747;148748;148749 118463;118464;118465 118463 1 GAIDEDVAEADIISTVEFNYSGDLLATGDK Unmodified 3127.4721 0.47209988 2847 Q66LE6 PPP2R2D Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 98.524 95.548 3 2.0313E-11 98739 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 56.156 53.749 7443800 3763400 0 3680400 0 0 0 0 0 0 0 0 0 0 0 0 17761 2847 16172 148750;148751 118466;118467 118466 2 GAIENLLAK Unmodified 927.53893 0.53893149 5052 Q9UPN9 TRIM33 E3 ubiquitin-protein ligase TRIM33 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65.537 64.446 2 0.014114 73149 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 58.782 10.026 289290000 112080000 16267000 17309000 5272900 9294800 0 10784000 13273000 14954000 16635000 13471000 16294000 13354000 11903000 18400000 17762 5052 16173 148752;148753;148754;148755;148756;148757;148758;148759;148760;148761;148762;148763;148764;148765 118468;118469;118470;118471;118472;118473;118474;118475;118476;118477;118478 118469 10 GAIEVLIR Unmodified 869.53345 0.53345218 1596 P49756 RBM25 RNA-binding protein 25 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.831 67.914 2 0.0052859 77528 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 107.43 47.789 340090000 0 0 0 9930600 16220000 22242000 25151000 18590000 30402000 38653000 35104000 38877000 27602000 31135000 46184000 17763 1596 16174 148766;148767;148768;148769;148770;148771;148772;148773;148774;148775;148776;148777 118479;118480;118481;118482;118483;118484;118485;118486;118487;118488;118489;118490;118491;118492;118493;118494;118495 118484 17 GAIIQLATGELK Unmodified 1212.7078 0.70778773 900 P0C7T5 ATXN1L Ataxin-1-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.24 2 1 10 1 1 1 1 1 1 1 1 1 1 1 1 1 79.624 78.666 2 0.00030363 100817 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.692 45.898 80818000 23588000 2779900 5144200 0 0 3241100 4121800 4393100 3779100 5498200 5196100 5020500 3128100 4464900 10463000 17764 900 16175 148778;148779;148780;148781;148782;148783;148784;148785;148786;148787;148788;148789;148790 118496;118497;118498;118499;118500;118501;118502;118503;118504;118505;118506;118507 118501 12 GAILSEEELAAMSPTAAAVAK Oxidation (M) 2045.0351 0.035071462 965 P12270 TPR Nucleoprotein TPR yes yes 0 1 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.59 2.99 3 1 18 3 1 1 1 3 2 1 1 2 1 1 1 1 3 77.663 77.034 2;3 9.396E-59 89268 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 126.63 118.53 597850000 0 364390000 2923600 3384300 7706900 40419000 14755000 7080700 9598200 34872000 16887000 16367000 9899400 12022000 57537000 17765 965 16176 148791;148792;148793;148794;148795;148796;148797;148798;148799;148800;148801;148802;148803;148804;148805;148806;148807;148808;148809;148810;148811;148812 118508;118509;118510;118511;118512;118513;118514;118515;118516;118517;118518 118514 1265 8 GAILSEEELAAMSPTAAAVAK Unmodified 2029.0402 0.04015684 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.65 2.94 3 1 19 3 1 1 2 1 1 2 2 2 2 2 2 2 85.882 85.308 2;3 8.7071E-48 98677 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 145.29 131.61 2400400000 0 2191200000 7478500 0 7602300 9264000 4176200 9111400 13019000 26138000 15989000 27174000 8988700 17473000 62795000 17766 965 16176 148813;148814;148815;148816;148817;148818;148819;148820;148821;148822;148823;148824;148825;148826;148827;148828;148829;148830;148831;148832;148833;148834;148835 118519;118520;118521;118522;118523;118524;118525;118526;118527;118528;118529;118530;118531;118532;118533;118534;118535;118536;118537;118538;118539 118525 18 GAIQFNPPLSEK Unmodified 1299.6823 0.68230126 3387 Q8NB78 KDM1B Lysine-specific histone demethylase 1B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 70.645 69.971 2 0.005898 79698 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.79 26.406 84392000 0 46499000 0 3201000 2522400 2765900 3335700 4168100 2972900 0 0 6062100 3825100 2997200 6043200 17767 3387 16177 148836;148837;148838;148839;148840;148841;148842;148843;148844;148845;148846;148847;148848 118540;118541;118542;118543;118544;118545;118546;118547;118548;118549;118550 118542 11 GAIREYQTQLIQR Unmodified 1574.8529 0.85288884 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 48.973 49.384 3 0.0011154 55638 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 43.03 21.399 62729000 0 0 0 0 0 0 0 0 0 19178000 14624000 0 16210000 0 12717000 17768 2392 16178 148849;148850;148851;148852 118551;118552;118553;118554 118551 4 GAISSEEIIK Unmodified 1045.5655 0.56554017 4555 Q9NPJ6 MED4 Mediator of RNA polymerase II transcription subunit 4 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 7.86 3.4 1 1 5 2 1 1 1 1 1 48.777 47.071 2 0.014615 60675 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.375 18.316 106950000 0 62467000 0 0 8061700 9001700 0 0 0 10176000 0 0 0 0 17238000 17769 4555 16179 148853;148854;148855;148856;148857;148858;148859 118555;118556;118557 118555 2 GALALAQAVQR Unmodified 1096.6353 0.63529149 953 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.859 59.968 2 0.0010011 68042 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 75.761 59.25 357450000 0 0 0 16034000 18433000 32925000 33704000 34584000 20626000 30353000 37843000 37612000 24725000 22366000 48245000 17770 953 16180 148860;148861;148862;148863;148864;148865;148866;148867;148868;148869;148870;148871 118558;118559;118560;118561;118562;118563;118564;118565;118566;118567;118568;118569 118563 11 GALALEEK Unmodified 829.45453 0.45453316 1356 P35579 MYH9 Myosin-9 no no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.56 3 2 1 13 2 1 1 2 1 1 1 1 1 1 1 1 1 1 32.254 31.572 1;2 0.0068357 34294 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 94.662 36.495 4250800000 0 261880000 2054500 239310000 382530000 345030000 356210000 238290000 283950000 335450000 371850000 513680000 310580000 259690000 350270000 17771 1356 16181 148872;148873;148874;148875;148876;148877;148878;148879;148880;148881;148882;148883;148884;148885;148886;148887 118570;118571;118572;118573;118574;118575;118576;118577;118578;118579;118580;118581;118582;118583;118584;118585;118586;118587;118588;118589;118590;118591 118582 19 GALDAELK Unmodified 815.43888 0.43888309 100 CON__Q7RTT2;CON__Q8N1N4-2;Q8N1N4 KRT78 Keratin, type II cytoskeletal 78 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 37.316 37.503 2 0.020537 41884 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 62.717 7.2762 + 414410000 0 0 0 117140000 25383000 35068000 24551000 81669000 0 0 24565000 51990000 35036000 3107600 15900000 17772 100 16182 148888;148889;148890;148891;148892;148893;148894;148895;148896;148897 118592;118593;118594;118595 118595 4 GALDLEKPPLPQPGPEK Unmodified 1784.9672 0.96724989 2763 Q5SXM2 SNAPC4 snRNA-activating protein complex subunit 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.147 71.22 3 0.022772 81276 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 28.472 17.987 93327000 0 0 0 7073300 8074600 8131300 6036100 6444600 5190900 10420000 7325800 9161100 8182500 7674500 9612900 17773 2763 16183 148898;148899;148900;148901;148902;148903;148904;148905;148906;148907;148908;148909 118596;118597;118598 118597 3 GALGGEPEQR Unmodified 1012.4938 0.49377221 2706 Q53LP3 SOWAHC Ankyrin repeat domain-containing protein SOWAHC yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 16.38 16.561 2 0.011338 15728 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 54.416 27.415 99574000 0 0 0 3821700 5333400 10430000 6283200 7725900 7054000 0 10251000 13257000 9114900 9057400 17246000 17774 2706 16184 148910;148911;148912;148913;148914;148915;148916;148917;148918;148919;148920 118599;118600 118599 2 GALHTVSHEDIR Unmodified 1333.6739 0.67386184 2239 Q13136 PPFIA1 Liprin-alpha-1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 22.118 22.612 3 0.0069695 22609 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.891 33.958 36190000 0 0 0 0 0 0 0 0 0 5196500 6413100 13285000 0 0 11296000 17775 2239 16185 148921;148922;148923;148924 118601;118602 118601 2 GALINVPPPFLGLPR Unmodified 1559.9188 0.91878356 1210 P26640 VARS Valine--tRNA ligase yes yes 0 0 0 By MS/MS 10 0 1 1 94.885 95.031 2 0.0077343 110333 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.608 50.721 4097600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4097600 17776 1210 16186 148925 118603 118603 0 GALIVLEGVDR Unmodified 1140.6503 0.65027285 1170 P23919 DTYMK Thymidylate kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 2 1 1 1 1 1 1 1 1 1 1 1 77.85 77.87 2 0.0044544 89890 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 72.643 33.851 213730000 0 0 0 22385000 11028000 18498000 11919000 13852000 13321000 24919000 15759000 25180000 15448000 11088000 30337000 17777 1170 16187 148926;148927;148928;148929;148930;148931;148932;148933;148934;148935;148936;148937;148938 118604;118605;118606;118607;118608;118609;118610;118611;118612 118611 9 GALLELLK Unmodified 855.54295 0.54295423 3094 Q7Z460 CLASP1 CLIP-associating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.024 82.085 2 0.040979 94889 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 50.127 16.388 48145000 0 0 0 1225900 2558800 4464400 3107300 3590900 3855000 5140100 3713100 3748500 2635900 4611000 9493900 17778 3094 16188 148939;148940;148941;148942;148943;148944;148945;148946;148947;148948;148949;148950 118613;118614;118615 118615 3 GALLPLSIR Unmodified 938.5913 0.59130141 3909 Q96KP1 EXOC2 Exocyst complex component 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 80.495 80.571 2 0.033064 93236 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 47.082 8.2901 19298000 0 0 0 820090 0 2269500 1511100 1577800 1312600 3322000 0 2842400 0 0 5642700 17779 3909 16189 148951;148952;148953;148954;148955;148956;148957;148958 118616 118616 1 GALLPLSIRDGEAK Unmodified 1438.8144 0.81437807 3909 Q96KP1 EXOC2 Exocyst complex component 2 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 70.343 70.482 3 0.0049441 80283 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.204 18.328 44188000 0 0 0 0 2160800 3759200 2482800 3905200 3250200 3154700 4434600 5604400 4255500 3704400 7476300 17780 3909 16190 148959;148960;148961;148962;148963;148964;148965;148966;148967;148968;148969 118617 118617 1 GALMLENLQK Unmodified 1115.6009 0.60087982 4976 Q9UKV3 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.87 3 5 1 1 1 1 1 1 1 1 68.81 66.407 2 0.0032496 85436 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.668 45.14 127250000 49137000 60694000 6350400 0 0 2323700 3736900 2086100 0 0 0 0 2920300 0 0 17781 4976 16191 148970;148971;148972;148973;148974;148975;148976;148977 118618;118619;118620;118621;118622 118618 5 GALMLENLQK Oxidation (M) 1131.5958 0.59579444 4976 Q9UKV3 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 6 4 4 4 2 2 1 1 1 1 59.267 55.947 2 0.0020956 70496 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 105.14 56.341 43941000 19965000 0 15767000 0 0 0 1204300 0 2833500 0 0 4171100 0 0 0 17782 4976 16191 148978;148979;148980;148981;148982;148983;148984;148985 118623;118624;118625;118626;118627;118628;118629 118628 6323 7 GALNPADITVLFK Unmodified 1357.7606 0.76055158 3258 Q8IXH7 NELFCD Negative elongation factor C/D yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 93.367 92.899 2 0.0024326 107681 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.676 39.405 126260000 0 56920000 1408200 0 3516000 4894100 2602300 4247100 4306200 11056000 7607400 6200000 3427600 5942700 14130000 17783 3258 16192 148986;148987;148988;148989;148990;148991;148992;148993;148994;148995;148996;148997;148998 118630;118631;118632;118633 118631 3 GALPLDTVTFYK Unmodified 1323.7075 0.70745338 1260 P30040 ERP29 Endoplasmic reticulum resident protein 29 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 84.148 83.031 2 8.4515E-05 103850 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.06 77.907 3128700000 88316000 2410600000 72711000 12367000 15748000 25618000 20447000 25199000 18177000 36550000 65456000 82161000 24035000 51114000 180210000 17784 1260 16193 148999;149000;149001;149002;149003;149004;149005;149006;149007;149008;149009;149010;149011;149012;149013;149014 118634;118635;118636;118637;118638;118639;118640;118641;118642;118643;118644;118645;118646;118647;118648 118637 13 GALQNIIPASTGAAK Unmodified 1410.7831 0.78307794 782 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 4 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69.487 69.05 2 5.986E-19 79480 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 133.07 115.63 7826700000 14592000 260220 162060 420280000 101620000 132850000 129900000 147800000 73221000 150860000 1236100000 978570000 138220000 782610000 3519700000 17785 782 16194 149015;149016;149017;149018;149019;149020;149021;149022;149023;149024;149025;149026;149027;149028;149029;149030 118649;118650;118651;118652;118653;118654;118655;118656;118657;118658;118659;118660;118661;118662;118663;118664 118655 12 GALSIHNQEGATPVSLALER Unmodified 2062.0807 0.080716522 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 75.188 75.3 3 2.9617E-28 86367 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.003 71.749 70348000 0 0 0 0 3470100 5150300 3960000 5381700 4081800 8433300 5986900 8345900 4874000 5753300 14911000 17786 2193 16195 149031;149032;149033;149034;149035;149036;149037;149038;149039;149040;149041 118665;118666;118667;118668;118669;118670;118671;118672;118673 118668 9 GALTGGTEVSALPCTTNAPGNGK Unmodified 2172.0481 0.048095765 2398 Q14244 MAP7 Ensconsin yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching 8.4 3.2 1 4 1 1 1 1 1 63.852 62.76 2 3.4593E-23 79073 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.77 124.8 23393000 0 12193000 0 0 0 3559500 2887300 1783100 2970600 0 0 0 0 0 0 17787 2398 16196 149042;149043;149044;149045;149046 118674;118675;118676 118676 3 GALTGGYYDTR Unmodified 1172.5462 0.54620171 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 39.71 39.874 2 0.010524 43845 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.398 50.369 23070000 0 0 0 0 2178100 5066700 3018900 0 0 2152700 4492100 6161100 0 0 0 17788 5071 16197 149047;149048;149049;149050;149051;149052 118677;118678;118679 118679 3 GALTGGYYDTRK Unmodified 1300.6412 0.64116473 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 1 2 2 2 1 2 2 2 1 1 2 29.994 30.232 2;3 0.00088112 32640 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 52.555 35.613 227820000 0 0 0 6849200 7278500 17337000 16434000 13256000 10747000 27866000 21681000 30478000 15504000 18064000 42325000 17789 5071 16198 149053;149054;149055;149056;149057;149058;149059;149060;149061;149062;149063;149064;149065;149066;149067;149068;149069;149070;149071 118680;118681;118682;118683;118684;118685;118686;118687;118688;118689;118690;118691;118692;118693 118681 14 GALTLSSPEVR Unmodified 1128.6139 0.61388734 5110 Q9Y2L1 DIS3 Exosome complex exonuclease RRP44 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 53.882 54.229 2 0.00015167 60419 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 108.98 71.818 64490000 0 0 0 0 0 14252000 0 0 0 11873000 0 9058800 0 17202000 12104000 17790 5110 16199 149072;149073;149074;149075;149076;149077 118694;118695;118696;118697;118698;118699;118700 118696 7 GALTTQDENGQTK Unmodified 1361.6423 0.64228694 5011 Q9ULX6 AKAP8L A-kinase anchor protein 8-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.081 13.236 2 8.519E-14 11996 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 142.83 106.92 95656000 0 0 0 4649200 5449400 6733400 6648000 4829300 4573200 12372000 10786000 8855800 10813000 8872900 11073000 17791 5011 16200 149078;149079;149080;149081;149082;149083;149084;149085;149086;149087;149088;149089 118701;118702;118703;118704;118705;118706;118707;118708;118709;118710 118705 10 GALVAINPGDRK Unmodified 1209.683 0.68296996 1661 P51580 TPMT Thiopurine S-methyltransferase yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 40.611 40.863 3 0.0055599 44176 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.095 31.907 55473000 0 0 0 0 2131800 3865300 1491500 3436400 0 5670900 6760000 9024500 3290400 6790900 13011000 17792 1661 16201 149090;149091;149092;149093;149094;149095;149096;149097;149098;149099 118711;118712 118711 2 GALVLGSSLK Unmodified 943.57023 0.57023162 1519 P46976 GYG1 Glycogenin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 59.175 58.301 2 0.021699 73633 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 87.639 17.641 55213000 0 0 16261000 0 16740000 0 0 0 11382000 0 0 0 0 0 10830000 17793 1519 16202 149100;149101;149102;149103 118713;118714 118714 1 GALYCELCYEK Unmodified 1404.6054 0.60537285 3865 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 yes yes 0 0 0 By MS/MS 2 0 1 1 68.793 62.894 2 0.028077 80125 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.303 40.452 30525000 0 30525000 0 0 0 0 0 0 0 0 0 0 0 0 0 17794 3865 16203 149104 118715 118715 1 GAMAATYSALNR Oxidation (M) 1240.587 0.58702067 1672 P51812 RPS6KA3 Ribosomal protein S6 kinase alpha-3 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching 10 0 8 1 1 1 1 1 1 1 1 34.014 34.343 2 0.00054289 38067 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 73.985 48.411 19289000 0 0 0 0 0 3101600 4243800 0 0 2576200 0 4336300 0 2327000 2704400 17795 1672 16204 149105;149106;149107;149108;149109;149110;149111;149112 118716;118717;118718;118719 118716 2683 3 GAMAATYSALNR Unmodified 1224.5921 0.59210605 1672 P51812 RPS6KA3 Ribosomal protein S6 kinase alpha-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 47.777 47.911 2 0.0027243 54086 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 68.557 47.094 48186000 0 0 0 0 3142700 7768000 6116900 0 3214000 0 0 0 8048400 0 19896000 17796 1672 16204 149113;149114;149115;149116;149117;149118 118720;118721;118722;118723;118724 118720 5 GAMEELEK Unmodified 905.41643 0.41643309 4053;2580 Q99717;Q15797 SMAD5;SMAD1 Mothers against decapentaplegic homolog 5;Mothers against decapentaplegic homolog 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 29.478 29.451 2 0.036816 31909 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 51.662 3.6267 1329800000 0 0 0 0 327370000 0 0 434010000 0 568410000 0 0 0 0 0 17797 4053;2580 16205 149119;149120;149121 118725;118726;118727 118727 3 GAMEELEK Oxidation (M) 921.41135 0.41134771 4053;2580 Q99717;Q15797 SMAD5;SMAD1 Mothers against decapentaplegic homolog 5;Mothers against decapentaplegic homolog 1 no no 0 1 0 By matching By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 13.091 13.432 2 0.02105 12220 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 54.611 22.676 34703000 0 0 0 0 0 0 0 0 0 6311600 6335700 9089300 0 5637800 7328900 17798 4053;2580 16205 149122;149123;149124;149125;149126 118728 118728 1 GAMPPAPVPAGTPAPPGPATMMPDGTLGLTPPTTER 3 Oxidation (M) 3498.6833 0.68331218 2508 Q15233 NONO Non-POU domain-containing octamer-binding protein yes yes 0 3 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 2 1 2 1 1 1 1 2 1 81.55 81.677 3;4 7.6813E-56 94187 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.31 73.206 625540000 0 0 0 0 0 66272000 0 45770000 50701000 80320000 73156000 82910000 39318000 110230000 76864000 17799 2508 16206 149127;149128;149129;149130;149131;149132;149133;149134;149135;149136;149137;149138 118729;118730;118731;118732;118733;118734;118735;118736;118737;118738;118739 118732 4116;4117;4118 10 GAMPPAPVPAGTPAPPGPATMMPDGTLGLTPPTTER Unmodified 3450.6986 0.69856831 2508 Q15233 NONO Non-POU domain-containing octamer-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 91.045 91.197 3 0.0011048 105639 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 20.572 15.141 10603000 0 0 0 0 0 0 0 0 0 2564000 1136800 0 0 0 6902300 17800 2508 16206 149139;149140;149141 118740;118741;118742 118741 3 GAMPPAPVPAGTPAPPGPATMMPDGTLGLTPPTTER Oxidation (M) 3466.6935 0.69348293 2508 Q15233 NONO Non-POU domain-containing octamer-binding protein yes yes 0 1 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 89.293 89.405 3 1.0114E-15 103471 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.582 32.785 13935000 0 0 0 0 0 0 0 0 0 0 0 0 944400 2145900 10845000 17801 2508 16206 149142;149143;149144 118743 118743 4116;4117;4118 1 GAMPPAPVPAGTPAPPGPATMMPDGTLGLTPPTTER 2 Oxidation (M) 3482.6884 0.68839756 2508 Q15233 NONO Non-POU domain-containing octamer-binding protein yes yes 0 2 0 By MS/MS 10 0 1 1 85.289 85.422 3 3.0537E-20 99191 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 50.261 44.166 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17802 2508 16206 149145 118744 118744 4116;4117;4118 1 GAMSTQQIK Oxidation (M) 978.48043 0.48043033 1578 P49588 AARS Alanine--tRNA ligase, cytoplasmic yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.47 3.59 3 2 10 2 2 1 1 1 1 1 1 1 1 1 1 1 7.5612 6.4931 2 8.0071E-06 4674 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 154.31 91.59 681660000 49452000 466260000 9205600 4938500 3505100 0 0 6017300 0 14185000 39760000 16773000 8413900 25012000 38137000 17803 1578 16207 149146;149147;149148;149149;149150;149151;149152;149153;149154;149155;149156;149157;149158;149159;149160 118745;118746;118747;118748;118749;118750;118751;118752;118753;118754;118755;118756;118757;118758 118749 2532 14 GAMSTQQIK Unmodified 962.48552 0.48551571 1578 P49588 AARS Alanine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 18.185 17.508 2 0.0014833 21117 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 136.11 83.43 927660000 84485000 627890000 0 7968700 6917200 12630000 9693400 6523300 4768500 15195000 26277000 24716000 10976000 27809000 61818000 17804 1578 16207 149161;149162;149163;149164;149165;149166;149167;149168;149169;149170;149171;149172;149173;149174;149175 118759;118760;118761;118762;118763;118764;118765;118766;118767 118763 9 GANDFMCDEMER Oxidation (M) 1489.5272 0.52719888 1067 P17987 TCP1 T-complex protein 1 subunit alpha yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 2 1 1 1 1 1 1 2 38.91 39.173 2 0.0029951 42007 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.203 41.631 63427000 0 0 0 2349600 0 4193300 5520900 3327300 2097300 4738000 6131900 7915600 3985400 0 23167000 17805 1067 16208 149176;149177;149178;149179;149180;149181;149182;149183;149184;149185;149186;149187 118768;118769;118770;118771;118772;118773;118774;118775 118775 1511;1512 8 GANDFMCDEMER Unmodified 1473.5323 0.53228426 1067 P17987 TCP1 T-complex protein 1 subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.695 55.821 2 0.0066093 62483 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.374 64.374 141050000 0 0 0 2766500 3502000 12000000 3770800 8418700 3348100 11704000 16272000 16530000 7738900 14305000 40693000 17806 1067 16208 149188;149189;149190;149191;149192;149193;149194;149195;149196;149197;149198;149199 118776;118777;118778;118779;118780 118777 4 GANILLTDNGHVK Unmodified 1350.7256 0.72556306 3228 Q8IVH8 MAP4K3 Mitogen-activated protein kinase kinase kinase kinase 3 yes yes 0 0 0 By MS/MS 2 0 1 1 56.678 48.497 3 0.012986 66219 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 31.215 19.682 13035000 13035000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17807 3228 16209 149200 118781 118781 1 GANILRDSTGNVK Unmodified 1343.7157 0.71572665 5119 Q9Y2U5 MAP3K2 Mitogen-activated protein kinase kinase kinase 2 yes yes 0 0 1 By MS/MS 2 0 1 1 40.42 33.797 3 0.011215 46935 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.726 19.883 41738000 41738000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17808 5119 16210 149201 118782 118782 0 GANIQLLDLPGIIEGAAQGK Unmodified 1977.0895 0.089490294 1753 P55039 DRG2 Developmentally-regulated GTP-binding protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 100.39 95.681 2 2.8199E-103 118295 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 177.38 164.61 12547000 0 12547000 0 0 0 0 0 0 0 0 0 0 0 0 0 17809 1753 16211 149202 118783 118783 1 GANLEEVNDEGYTPLMEAAR Oxidation (M) 2193.9848 0.98482681 3250 Q8IWZ3 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.586 71.652 2 1.0813E-58 82553 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 128.9 120.8 76113000 0 0 0 3669800 4884600 5591700 6014700 4696000 3776200 8634800 8436700 10540000 7679100 6309100 5879800 17810 3250 16212 149203;149204;149205;149206;149207;149208;149209;149210;149211;149212;149213;149214 118784;118785;118786;118787;118788;118789;118790;118791;118792;118793;118794;118795 118785 4858 12 GANLEEVNDEGYTPLMEAAR Unmodified 2177.9899 0.98991218 3250 Q8IWZ3 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 78.724 78.885 2 1.8742E-214 90834 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 222.29 205.76 43458000 0 0 0 0 0 0 0 7385500 0 0 0 6787100 6694700 10207000 12384000 17811 3250 16212 149215;149216;149217;149218;149219;149220;149221 118796;118797;118798;118799;118800;118801 118797 6 GANPVEIR Unmodified 854.46102 0.46101552 930 P10809 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 28.807 28.957 2 0.0068357 31220 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 94.662 55.641 421220000 0 0 0 24674000 29804000 53469000 36538000 29278000 30348000 44315000 54053000 44309000 44202000 30226000 0 17812 930 16213 149222;149223;149224;149225;149226;149227;149228;149229;149230;149231;149232 118802;118803;118804;118805;118806;118807;118808;118809;118810;118811 118803 10 GANPVEIRR Unmodified 1010.5621 0.56212655 930 P10809 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.546 21.75 2 0.025578 22759 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 91.069 61.692 562960000 0 0 0 19776000 17873000 56649000 39887000 25192000 27046000 50021000 65720000 63306000 79279000 43865000 74344000 17813 930 16214 149233;149234;149235;149236;149237;149238;149239;149240;149241;149242;149243;149244 118812;118813;118814;118815;118816;118817 118817 4 GANRTETVTSFR Unmodified 1337.6688 0.66877646 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 27.508 27.765 3 0.0079679 30030 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 35.118 26.993 300620000 0 0 0 0 0 38417000 29669000 26641000 28116000 33560000 46380000 0 38822000 1403300 57616000 17814 1986 16215 149245;149246;149247;149248;149249;149250;149251;149252;149253 118818 118818 1 GANRTETVTSFRK Unmodified 1465.7637 0.76373948 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.709 19.91 3 0.0030537 20678 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 80.96 58.426 933660000 0 0 0 55991000 57141000 73051000 62177000 65936000 57665000 67194000 67486000 115240000 70034000 80566000 161180000 17815 1986 16216 149254;149255;149256;149257;149258;149259;149260;149261;149262;149263;149264;149265 118819;118820;118821;118822;118823;118824;118825;118826;118827;118828 118821 2 GANTHLSTFSFTK Unmodified 1409.6939 0.69392858 4 A0FGR8 ESYT2 Extended synaptotagmin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 55.376 55.461 3 0.02965 63034 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 20.657 15.503 57453000 0 0 0 3976900 5089200 6558000 4864800 5297600 4952200 5273700 6735200 0 3717400 6354500 4633200 17816 4 16217 149266;149267;149268;149269;149270;149271;149272;149273;149274;149275;149276 118829;118830 118830 2 GAPAAAAAAAPPPTPAPPPPPAPVAAAAPAR Unmodified 2661.4391 0.43910487 2968 Q6SPF0 SAMD1 Atherin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.283 76.33 3 4.019E-29 88252 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 66.282 63.358 96379000 0 0 0 4611100 6688600 7682400 8944700 7197500 0 9816400 10546000 15005000 4714000 7708000 13465000 17817 2968 16218 149277;149278;149279;149280;149281;149282;149283;149284;149285;149286;149287 118831;118832;118833;118834;118835;118836;118837;118838;118839;118840;118841;118842 118840 12 GAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPR Unmodified 2985.6301 0.63009354 2968 Q6SPF0 SAMD1 Atherin yes yes 0 0 1 By MS/MS 10 0 1 1 73.712 73.814 4 3.4471E-05 85098 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 27.632 17.117 7163000 0 0 0 0 0 0 0 0 0 7163000 0 0 0 0 0 17818 2968 16219 149288 118843 118843 1 GAPAAATAPAPTAHK Unmodified 1330.6993 0.69934831 3612 Q92522 H1FX Histone H1x yes yes 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 19.425 19.619 2 0.0007754 18904 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 61.815 51.529 26141000 0 0 0 0 1730700 2764700 2183000 1390400 1920600 3129000 2818100 0 3958200 2313100 3933600 17819 3612 16220 149289;149290;149291;149292;149293;149294;149295;149296;149297;149298 118844 118844 1 GAPANVSSSDLTGRQEVSR Unmodified 1929.9504 0.95043063 1585 P49674 CSNK1E Casein kinase I isoform epsilon yes yes 0 0 1 By MS/MS By matching By MS/MS 10 0 3 1 1 1 38.949 39.407 3 0.0050647 43306 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 32.55 19.449 20092000 0 0 0 0 0 0 0 0 0 6317500 4835000 8939100 0 0 0 17820 1585 16221 149299;149300;149301 118845 118845 1 GAPATPHLADAPK Unmodified 1244.6513 0.65133548 4073 Q99958 FOXC2 Forkhead box protein C2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 35.721 34.924 3 0.024736 38274 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 30.484 13.542 123900000 0 53639000 0 0 0 0 0 6475200 11733000 15095000 0 10172000 7059400 8056700 11668000 17821 4073 16222 149302;149303;149304;149305;149306;149307;149308;149309;149310 118846;118847;118848 118848 3 GAPDPVQDEVQGVTLLPTTK Unmodified 2064.0739 0.07389981 3838 Q96FS4 SIPA1 Signal-induced proliferation-associated protein 1 yes yes 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 82.033 82.068 2 0.00026763 94992 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 60.55 48.384 23956000 0 0 0 838460 1345900 1815300 1862800 2092200 0 3862500 3937000 3514800 1654000 3033400 0 17822 3838 16223 149311;149312;149313;149314;149315;149316;149317;149318;149319;149320 118849;118850;118851 118849 1 GAPGQPGTILR Unmodified 1065.5931 0.59309232 1663 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.218 41.397 2 1.9228E-05 46269 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 125.16 91.072 650030000 0 0 0 39717000 37763000 48987000 50722000 43108000 39319000 46412000 75937000 81244000 73241000 49264000 64315000 17823 1663 16224 149321;149322;149323;149324;149325;149326;149327;149328;149329;149330;149331;149332 118852;118853;118854;118855;118856;118857;118858;118859;118860;118861;118862;118863 118852 12 GAPIETLGYHSASNR Unmodified 1571.7692 0.76921879 2810 Q5VT52 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 44.697 44.869 3 4.271E-10 50388 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 79.022 65.305 187960000 0 0 0 11371000 9869800 7494300 16952000 13962000 13654000 12505000 20488000 23404000 19914000 18023000 20325000 17824 2810 16225 149333;149334;149335;149336;149337;149338;149339;149340;149341;149342;149343;149344 118864;118865;118866;118867;118868;118869;118870;118871;118872;118873;118874;118875;118876;118877;118878 118874 15 GAPIETLGYHSASNRR Unmodified 1727.8703 0.87032982 2810 Q5VT52 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 37.291 37.471 3;4 3.8911E-20 41331 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 87.932 76.014 1044800000 0 0 0 50457000 47970000 53801000 72861000 81397000 70159000 77929000 102220000 171430000 120310000 72708000 123520000 17825 2810 16226 149345;149346;149347;149348;149349;149350;149351;149352;149353;149354;149355;149356;149357;149358;149359;149360;149361;149362;149363;149364;149365;149366;149367;149368 118879;118880;118881;118882;118883;118884;118885;118886;118887;118888;118889;118890;118891;118892;118893;118894;118895;118896;118897;118898;118899;118900;118901;118902 118881 21 GAPNADLIFK Unmodified 1044.5604 0.56039521 4490 Q9HAU5 UPF2 Regulator of nonsense transcripts 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 67.285 66.949 2 0.012563 77731 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 52.255 31.27 209710000 0 109770000 0 5165800 0 9384800 8280100 7955900 7136700 14441000 9908100 11660000 7724800 7363200 10922000 17826 4490 16227 149369;149370;149371;149372;149373;149374;149375;149376;149377;149378;149379;149380 118903;118904 118904 2 GAPPLPPILR Unmodified 1029.6335 0.63350057 3528 Q8TF74 WIPF2 WAS/WASL-interacting protein family member 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.278 80.337 2 0.0070199 92476 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.48 40.589 49466000 0 0 0 1320000 1674700 3583800 3933900 2385800 3179000 3708700 5409100 6160500 2218500 5226700 10665000 17827 3528 16228 149381;149382;149383;149384;149385;149386;149387;149388;149389;149390;149391;149392 118905;118906;118907;118908;118909;118910;118911;118912 118907 8 GAPPLQVQWFR Unmodified 1297.6931 0.69314072 3581 Q8WX93 PALLD Palladin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 83.811 83.876 2 0.00045456 96711 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.743 72.507 126940000 0 0 0 4384200 6378900 10394000 7107000 12501000 10123000 11888000 8618300 7589900 6601700 8574200 32780000 17828 3581 16229 149393;149394;149395;149396;149397;149398;149399;149400;149401;149402;149403;149404 118913;118914;118915;118916;118917;118918;118919;118920;118921;118922;118923 118917 11 GAPPSSNIEDFHGLLPK Unmodified 1777.8999 0.89989861 1473 P43243 MATR3 Matrin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 77 77.175 3 0.013467 88721 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 30.536 19.592 265630000 0 0 0 0 0 0 26366000 0 20153000 0 35840000 50320000 35018000 28868000 69060000 17829 1473 16230 149405;149406;149407;149408;149409;149410;149411 118924 118924 1 GAPQHYPK Unmodified 896.45045 0.45045083 1974 P78344 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 6.8691 6.9581 2 0.0067842 4951 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 97.071 70.109 192700000 0 0 0 15401000 20734000 22724000 22092000 29305000 27811000 0 0 16969000 0 12620000 25039000 17830 1974 16231 149412;149413;149414;149415;149416;149417;149418;149419;149420 118925;118926;118927;118928;118929;118930 118929 6 GAPQRGQTPEAGADK Unmodified 1481.7223 0.7222686 2137 Q07617 SPAG1 Sperm-associated antigen 1 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 7.9842 8.1071 3 0.013321 6701 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 32.6 24.292 37374000 0 0 0 1434800 1559500 2152700 2345900 1890700 0 3911200 8382600 5709100 3828800 2126400 4032600 17831 2137 16232 149421;149422;149423;149424;149425;149426;149427;149428;149429;149430;149431 118931;118932 118932 2 GAPSSPATGVLPSPQGK Unmodified 1549.81 0.81002097 2756 Q5SRE5 NUP188 Nucleoporin NUP188 homolog yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 53.644 53.418 2 0.0059424 60465 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 38.178 18.416 6092700 0 0 0 0 3634300 0 2458400 0 0 0 0 0 0 0 0 17832 2756 16233 149432;149433 118933;118934 118933 2 GAPTTSLISVAVTK Unmodified 1343.766 0.76603089 1573 P49419 ALDH7A1 Alpha-aminoadipic semialdehyde dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 75.524 74.455 2 0.00039299 93068 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.64 57.63 1119900000 152010000 861280000 6461100 7142100 4663800 5853700 2910500 6421700 3804900 4583400 14459000 10499000 4834000 8242500 26773000 17833 1573 16234 149434;149435;149436;149437;149438;149439;149440;149441;149442;149443;149444;149445;149446;149447;149448;149449;149450 118935;118936;118937;118938;118939;118940;118941;118942;118943 118935 8 GAPVIVPELGK Unmodified 1078.6386 0.63864553 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.148 72.219 2 0.0043662 82812 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 61.65 43.614 213820000 0 0 0 10316000 12304000 16953000 17181000 22793000 14578000 19055000 18470000 19664000 17978000 17146000 27386000 17834 5262 16235 149451;149452;149453;149454;149455;149456;149457;149458;149459;149460;149461;149462 118944;118945;118946;118947;118948;118949;118950;118951;118952;118953;118954;118955 118953 11 GAPVNISSSDLTGR Unmodified 1372.6947 0.69465686 1552 P48730 CSNK1D Casein kinase I isoform delta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 56.674 57.081 2 0.00040197 64163 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.555 52.193 30469000 0 0 0 0 0 7895600 0 0 0 0 5184100 8813800 0 0 8575800 17835 1552 16236 149463;149464;149465;149466;149467 118956;118957;118958;118959;118960 118958 5 GAQAAIVVYDITNTDTFAR Unmodified 2025.0167 0.016719282 1646 P51148 RAB5C Ras-related protein Rab-5C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 6 2 2 2 87.286 87.442 2;3 5.2893E-08 101140 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.55 87.351 20423000 0 0 0 0 0 0 0 0 0 7634300 6006400 0 0 0 6782100 17836 1646 16237 149468;149469;149470;149471;149472;149473 118961;118962;118963;118964;118965 118962 4 GAQAARGSSNASLK Unmodified 1316.6797 0.6796755 3616 Q92539 LPIN2 Phosphatidate phosphatase LPIN2 yes yes 0 0 1 By MS/MS 2 0 1 1 9.7443 5.9696 2 0.030855 9944 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.353 15.195 4729800 4729800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17837 3616 16238 149474 118966 118966 1 GAQASSGSPALPR Unmodified 1197.6102 0.61019895 1462 P42684 ABL2 Abelson tyrosine-protein kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 28.813 29.063 2 0.0023139 31368 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 77.14 73.568 88119000 0 0 0 0 8368400 0 0 7707700 0 13577000 22905000 0 15046000 8925700 11589000 17838 1462 16239 149475;149476;149477;149478;149479;149480;149481 118967;118968;118969;118970;118971;118972 118970 6 GAQASSGSPALPRK Unmodified 1325.7052 0.70516197 1462 P42684 ABL2 Abelson tyrosine-protein kinase 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.712 18.909 3 0.00029983 17842 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.774 32.742 139550000 0 0 0 9071700 8724000 8982600 12742000 10224000 11923000 15301000 14421000 14490000 11553000 7399800 14714000 17839 1462 16240 149482;149483;149484;149485;149486;149487;149488;149489;149490;149491;149492;149493 118973;118974;118975;118976;118977;118978;118979;118980;118981;118982;118983 118976 10 GAQATLSSTTK Unmodified 1063.551 0.55095274 2228 Q13045 FLII Protein flightless-1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 14.637 14.783 2 3.6108E-05 13580 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 117.31 74.245 53373000 0 0 0 3859000 3054300 4725200 0 4364300 0 6510400 0 9164800 5584500 4368100 11742000 17840 2228 16241 149494;149495;149496;149497;149498;149499;149500;149501;149502;149503 118984;118985;118986;118987;118988;118989;118990;118991;118992;118993 118986 9 GAQEEEPTDPQLMR Unmodified 1599.7199 0.71988533 1412 P40424 PBX1 Pre-B-cell leukemia transcription factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 45.985 46.227 2 7.7002E-19 50847 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 125.22 118.01 74650000 0 0 0 0 4349000 7437300 3907800 0 2844800 7189600 12258000 10112000 7575400 6363200 12613000 17841 1412 16242 149504;149505;149506;149507;149508;149509;149510;149511;149512;149513;149514 118994;118995;118996;118997;118998;118999;119000;119001;119002;119003;119004 118997 11 GAQEEEPTDPQLMR Oxidation (M) 1615.7148 0.71479996 1412 P40424 PBX1 Pre-B-cell leukemia transcription factor 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 34.904 35.08 2 1.0273E-11 38609 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 98.943 92.089 49070000 0 0 0 3533000 3748000 0 6289900 4269400 0 6966100 0 5400100 8382200 4602200 5878900 17842 1412 16242 149515;149516;149517;149518;149519;149520;149521;149522;149523;149524;149525 119005;119006;119007;119008;119009;119010;119011;119012;119013;119014 119010 2221 10 GAQERLPTVPLSGMYNK Unmodified 1859.9564 0.95636763 188 O14562 UBFD1 Ubiquitin domain-containing protein UBFD1 yes yes 0 0 1 By MS/MS 2 0 1 1 80.189 72.059 3 0.0019739 94544 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 39.338 32.564 22927000 22927000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17843 188 16243 149526 119015 119015 1 GAQGALPER Unmodified 897.46683 0.46682918 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 18.727 18.846 2 0.01612 17738 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 56.81 38.119 29756000 0 0 0 2959800 4040800 2699100 2830700 2472200 2460800 3597900 2974800 0 3206600 2513100 0 17844 4139 16244 149527;149528;149529;149530;149531;149532;149533;149534;149535;149536 119016;119017;119018;119019 119018 4 GAQGALPERDASR Unmodified 1326.664 0.66402543 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.501 16.68 3 0.00047873 16691 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 72.089 57.41 293060000 0 0 0 18817000 14793000 23036000 20537000 17018000 16454000 25623000 24706000 43344000 27029000 30659000 31044000 17845 4139 16245 149537;149538;149539;149540;149541;149542;149543;149544;149545;149546;149547;149548 119020;119021;119022;119023;119024;119025;119026;119027;119028;119029;119030;119031 119030 8 GAQGEPHDVAPNGPSAGGLAIPQSSSSSSRPPTR Unmodified 3268.5821 0.5820933 714 O96013 PAK4 Serine/threonine-protein kinase PAK 4 yes yes 0 0 1 By MS/MS By matching By MS/MS 10 0 3 1 1 1 54.9 55.302 4 2.0245E-27 62106 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.137 49.288 24918000 0 0 0 0 0 0 0 0 0 7529900 6740000 0 0 0 10648000 17846 714 16246 149549;149550;149551 119032;119033;119034 119034 3 GAQLTPEELR Unmodified 1112.5826 0.58258722 3212 Q86YV9 HPS6 Hermansky-Pudlak syndrome 6 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 47.321 47.327 2 0.003478 53240 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 76.345 53.026 68923000 0 0 0 7003100 5176200 7190800 7693000 6002500 4988500 9423500 0 0 14220000 7225900 0 17847 3212 16247 149552;149553;149554;149555;149556;149557;149558;149559;149560;149561 119035;119036;119037;119038;119039;119040;119041;119042;119043 119040 9 GAQPAPLLCSVLK Unmodified 1352.7486 0.74860669 2518 Q15345 LRRC41 Leucine-rich repeat-containing protein 41 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 82.048 82.128 2 0.0026159 94638 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.836 39.524 56385000 0 0 0 2291600 0 4663900 3660400 0 3743400 6465700 9097400 9482600 0 6504800 10475000 17848 2518 16248 149562;149563;149564;149565;149566;149567;149568;149569;149570 119044;119045;119046;119047;119048;119049;119050;119051;119052 119047 9 GAQVEEIWSLEPENFEK Unmodified 2003.9476 0.94763666 5235 Q9Y5K5 UCHL5 Ubiquitin carboxyl-terminal hydrolase isozyme L5 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 87.271 87.452 2 0.00022613 101166 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.021 72.265 5216600 0 0 0 0 0 0 0 0 0 0 1817700 0 0 0 3398900 17849 5235 16249 149571;149572 119053 119053 1 GAQVNAVNQNGCTPLHYAASK Unmodified 2199.0491 0.049098818 549 O75832 PSMD10 26S proteasome non-ATPase regulatory subunit 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.57 3.85 3 1 3 1 2 1 1 1 1 54.17 48.479 3 5.203E-93 60858 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 171.79 147.38 623520000 451790000 139860000 31873000 0 0 0 0 0 0 0 0 0 0 0 0 17850 549 16250 149573;149574;149575;149576;149577;149578;149579 119054;119055;119056;119057;119058;119059;119060;119061;119062;119063 119060 10 GAQYQPILR Unmodified 1044.5716 0.5716286 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 0 0 By MS/MS 10 0 1 1 45.675 46.016 2 0.04306 51794 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 60.709 35.815 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17851 1201 16251 149580 119064 119064 1 GAREENSGLLQELEELRK Unmodified 2070.0705 0.070545766 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 0 2 By MS/MS 2 0 1 1 88.02 79.89 4 0.00050884 103883 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.968 36.87 15169000 15169000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17852 1286 16252 149581 119065 119065 1 GARLIPEMDQIFTEVEMTTLEK Unmodified 2550.271 0.27096141 5206 Q9Y4L1 HYOU1 Hypoxia up-regulated protein 1 yes yes 0 0 1 By MS/MS By MS/MS 3 0 2 1 1 99.854 96.376 3 0.01173 115615 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 27.408 20.744 3686000 2014200 1671800 0 0 0 0 0 0 0 0 0 0 0 0 0 17853 5206 16253 149582;149583 119066;119067 119066 2 GARYNLAIEEHCTFGDPIV Unmodified 2161.0262 0.026238111 4853 Q9UBR2 CTSZ Cathepsin Z yes yes 0 0 1 By MS/MS 2 0 1 1 86.535 78.405 3 0.00071524 102138 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.704 38.252 35096000 35096000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17854 4853 16254 149584 119068 119068 1 GASDEDLKK Unmodified 961.47164 0.47163978 4734 Q9NXW2 DNAJB12 DnaJ homolog subfamily B member 12 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 6.4959 3.1937 2 0.0013917 4677 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 127.02 0 155740000 0 155740000 0 0 0 0 0 0 0 0 0 0 0 0 0 17855 4734 16255 149585;149586 119069;119070 119070 1 GASDNPCSEVYHGPHANSEVEVK Unmodified 2482.0819 0.081915089 4921 Q9UI42 CPA4 Carboxypeptidase A4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 2 1 1 43.064 42.23 3;4 2.7892E-11 47814 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 70.994 67.896 70726000 0 0 13896000 38416000 0 0 0 0 0 0 11313000 0 0 7101100 0 17856 4921 16256 149587;149588;149589;149590;149591 119071;119072;119073;119074;119075;119076 119075 6 GASGPQVGNALGSLEPLR Unmodified 1721.906 0.90604662 4472 Q9H9F9 ACTR5 Actin-related protein 5 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 79.63 79.756 2 0.00050834 91390 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 68.809 34.923 22367000 0 0 0 0 0 2468300 2650000 0 2279700 5309300 4315000 0 0 5344600 0 17857 4472 16257 149592;149593;149594;149595;149596;149597;149598 119077;119078;119079;119080;119081;119082;119083 119082 7 GASGSFVVVQK Unmodified 1077.5819 0.58185894 2757 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 43.287 42.753 2 0.00037948 48886 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 87.308 59.089 95563000 0 45586000 0 9735900 0 0 0 0 5831700 0 9259200 7437600 0 7472100 10240000 17858 2757 16258 149599;149600;149601;149602;149603;149604;149605;149606;149607;149608 119084;119085;119086;119087;119088;119089;119090;119091;119092;119093;119094 119094 9 GASLEEVNDEGYTPLMEAAR Oxidation (M) 2166.9739 0.97392777 472 O75179 ANKRD17 Ankyrin repeat domain-containing protein 17 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.451 72.521 2 1.1614E-71 83587 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 154.65 146.74 124000000 0 0 0 4181700 6992200 10953000 9050100 11311000 8634700 13144000 16684000 15870000 8548700 8334100 10298000 17859 472 16259 149609;149610;149611;149612;149613;149614;149615;149616;149617;149618;149619;149620 119095;119096;119097;119098;119099;119100;119101;119102;119103;119104;119105;119106;119107 119097 595 13 GASLEEVNDEGYTPLMEAAR Unmodified 2150.979 0.97901315 472 O75179 ANKRD17 Ankyrin repeat domain-containing protein 17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 79.26 79.443 2 3.6631E-109 91439 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 224.05 197.93 64122000 0 0 0 0 0 0 0 8448000 0 0 12777000 18559000 0 8620300 15717000 17860 472 16259 149621;149622;149623;149624;149625 119108;119109;119110;119111;119112 119108 5 GASLLLYQR Unmodified 1019.5764 0.57637963 451 O75044 SRGAP2 SLIT-ROBO Rho GTPase-activating protein 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 61.634 61.659 2 0.01167 70501 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 62.464 33.048 34863000 0 0 0 2052300 2663600 3607300 3721300 3134200 2292800 3839800 0 6928000 3273200 3350600 0 17861 451 16260 149626;149627;149628;149629;149630;149631;149632;149633;149634;149635 119113;119114 119113 2 GASQAGMTGYGMPR 2 Oxidation (M) 1414.5969 0.59693343 1391 P37802;Q9UI15 TAGLN2;TAGLN3 Transgelin-2;Transgelin-3 yes no 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 17.386 17.618 2 3.266E-08 16110 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.096 86.791 112570000 0 0 0 7431500 0 8772500 9521400 5835800 0 9572800 12475000 19958000 11820000 11102000 16084000 17862 1391 16261 149636;149637;149638;149639;149640;149641;149642;149643;149644;149645 119115;119116;119117;119118;119119;119120;119121;119122;119123;119124;119125;119126;119127;119128 119118 2152;2153 14 GASQAGMTGYGMPR Oxidation (M) 1398.602 0.6020188 1391 P37802;Q9UI15 TAGLN2;TAGLN3 Transgelin-2;Transgelin-3 yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 25 1 2 3 2 2 3 2 2 2 1 2 3 30.863 31.086 2 4.1975E-20 35302 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 140.78 131.44 473770000 0 0 0 12288000 14885000 22611000 29883000 16409000 26251000 33772000 56686000 67990000 16291000 41030000 135670000 17863 1391 16261 149646;149647;149648;149649;149650;149651;149652;149653;149654;149655;149656;149657;149658;149659;149660;149661;149662;149663;149664;149665;149666;149667;149668;149669;149670 119129;119130;119131;119132;119133;119134;119135;119136;119137;119138;119139;119140;119141;119142;119143;119144;119145;119146;119147;119148;119149;119150;119151;119152;119153 119142 2152;2153 23 GASSAYLENSK Unmodified 1125.5302 0.53021729 2112 Q05086 UBE3A Ubiquitin-protein ligase E3A yes yes 0 0 0 By MS/MS 2 0 1 1 24.514 20.385 2 0.00073551 26778 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.143 70.584 84971000 0 84971000 0 0 0 0 0 0 0 0 0 0 0 0 0 17864 2112 16262 149671 119154 119154 1 GASSPGILVLTTGLSK Unmodified 1499.8559 0.85590853 2379 Q14155 ARHGEF7 Rho guanine nucleotide exchange factor 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 85.185 84.999 2 0.0013239 98807 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 67.997 67.857 167850000 0 6836800 0 6322500 11004000 15147000 12239000 14914000 11283000 18829000 15653000 14693000 11190000 8470800 21273000 17865 2379 16263 149672;149673;149674;149675;149676;149677;149678;149679;149680;149681;149682;149683;149684 119155;119156;119157;119158;119159;119160;119161;119162;119163;119164 119163 9 GASSPYGAPGTPR Unmodified 1216.5836 0.58364985 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 29.569 29.779 2 2.5444E-05 31855 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 105.86 69.92 172770000 0 0 0 11087000 9825400 0 12837000 12324000 10309000 16542000 14539000 24457000 20885000 13906000 26056000 17866 2804 16264 149685;149686;149687;149688;149689;149690;149691;149692;149693;149694;149695 119165;119166;119167;119168;119169;119170;119171;119172;119173;119174 119173 7 GASTFKEEPQTVPEAR Unmodified 1745.8584 0.85842773 1052 P17275 JUNB Transcription factor jun-B yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 38.606 38.521 3 0.027175 43126 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 28.627 23.723 66579000 0 0 0 14042000 14250000 0 0 0 0 16635000 21652000 0 0 0 0 17867 1052 16265 149696;149697;149698;149699 119175 119175 1 GATAAPGSGSAPAPAPKPEAAAK Unmodified 1974.0171 0.017053633 27 A6NFI3 ZNF316 Zinc finger protein 316 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 30.469 30.612 3 4.2785E-26 32853 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 91.725 89.727 107960000 0 0 0 7495600 7808500 8258100 5931500 5889300 5872300 12891000 9834500 17259000 14544000 12173000 0 17868 27 16266 149700;149701;149702;149703;149704;149705;149706;149707;149708;149709;149710 119176;119177;119178;119179;119180;119181;119182;119183;119184;119185;119186;119187;119188 119181 13 GATALEMGMPLLLQK Unmodified 1571.8415 0.84152079 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 0 By MS/MS 10 0 1 1 91.015 91.153 2 0.0073077 105611 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.927 34.491 1851300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1851300 17869 2804 16267 149711 119189 119189 1 GATALPLRTPSGDLAITEK Unmodified 1910.0473 0.047291129 1462 P42684 ABL2 Abelson tyrosine-protein kinase 2 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 74.087 74.315 3 0.037057 85727 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 36.744 30.763 34800000 0 0 0 0 0 0 0 0 0 0 34800000 0 0 0 0 17870 1462 16268 149712;149713 119190;119191 119191 1 GATASQLEEVFHSEK Unmodified 1631.7791 0.77911477 4930 Q9UIV8 SERPINB13 Serpin B13 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching 10 0 4 1 1 1 1 66.726 66.731 3 0.037094 76442 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 27.208 20.586 21659000 0 0 0 9863900 0 0 0 4700700 0 0 4231600 0 0 2863100 0 17871 4930 16269 149714;149715;149716;149717 119192 119192 1 GATDSYIEK Unmodified 982.46074 0.46074075 4689 Q9NW08 POLR3B DNA-directed RNA polymerase III subunit RPC2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 22.713 22.503 2 0.013737 23670 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 59.35 32.748 67511000 0 24621000 0 2620300 1795500 0 4259500 2368800 2982800 5514900 5869700 7456900 4439200 5582100 0 17872 4689 16270 149718;149719;149720;149721;149722;149723;149724;149725;149726;149727;149728 119193;119194;119195;119196;119197;119198;119199;119200;119201;119202 119197 10 GATGDAEQPRGPSGAER Unmodified 1654.7659 0.76592432 4343 Q9H147 DNTTIP1 Deoxynucleotidyltransferase terminal-interacting protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.87 14.032 3 7.4245E-07 12850 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.716 46.883 92296000 0 0 0 4563900 9587800 7069600 4667600 4374900 4030100 12131000 8766100 8901200 6890200 7554500 13758000 17873 4343 16271 149729;149730;149731;149732;149733;149734;149735;149736;149737;149738;149739;149740 119203;119204;119205;119206;119207;119208;119209;119210;119211;119212;119213;119214;119215;119216 119206 14 GATGECNISERK Unmodified 1320.6092 0.60921267 5225 Q9Y597 KCTD3 BTB/POZ domain-containing protein KCTD3 yes yes 0 0 1 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 9.7527 9.8646 3 0.0031697 8171 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 40.373 27.418 32136000 0 0 0 2695000 2074100 2133600 3491600 1835500 1923400 2748500 0 5125300 2749200 2948200 4411500 17874 5225 16272 149741;149742;149743;149744;149745;149746;149747;149748;149749;149750;149751;149752 119217;119218;119219;119220;119221;119222;119223;119224 119223 7 GATGGPGDEPLEPAREQGSLDAER Unmodified 2408.1204 0.12040908 3876 Q96IF1 AJUBA LIM domain-containing protein ajuba yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 49.215 49.73 3 1.3044E-11 56274 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 69.152 60.444 32128000 0 0 0 0 0 0 0 0 0 0 0 0 14898000 0 17230000 17875 3876 16273 149753;149754;149755 119225;119226;119227;119228 119228 4 GATLALTQVTPQDER Unmodified 1598.8264 0.82639932 1472 P43121 MCAM Cell surface glycoprotein MUC18 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 63.997 64.008 2 1.3626E-09 73101 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 116.55 89.76 26434000 0 0 0 2025300 2032600 0 1851300 0 0 0 3957000 6181400 4762400 5623600 0 17876 1472 16274 149756;149757;149758;149759;149760;149761;149762;149763;149764 119229;119230;119231;119232;119233;119234;119235;119236 119234 8 GATPAPPGK Unmodified 794.42865 0.42865276 2289 Q13428 TCOF1 Treacle protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 12.752 12.937 2 0.0099506 12351 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 65.252 27.694 178560000 0 0 0 0 14742000 13922000 17816000 0 10304000 19433000 19230000 20552000 26380000 16537000 19644000 17877 2289 16275 149765;149766;149767;149768;149769;149770;149771;149772;149773;149774 119237;119238;119239;119240;119241;119242;119243 119237 7 GATQQILDEAER Unmodified 1329.6525 0.6524577 1980 P78371 CCT2 T-complex protein 1 subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.291 52.436 2 2.2897E-15 59088 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 184.36 164.57 1677300000 0 0 0 76962000 76328000 113950000 120580000 101640000 48104000 167030000 155870000 140740000 141940000 130790000 403360000 17878 1980 16276 149775;149776;149777;149778;149779;149780;149781;149782;149783;149784;149785;149786 119244;119245;119246;119247;119248;119249;119250;119251;119252;119253;119254;119255 119252 12 GATRPNGPNTGNK Unmodified 1282.6378 0.63781068 1104 P20339 RAB5A Ras-related protein Rab-5A yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 2 1 1 1 2 2 2 1 2 1 2 1 6.2164 6.3483 2;3 2.0641E-08 4341 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 80.815 65.803 53321000 0 0 0 1409100 2078700 1859800 2254400 15544000 1411900 2139300 4154200 2838300 1645800 14635000 3349700 17879 1104 16277 149787;149788;149789;149790;149791;149792;149793;149794;149795;149796;149797;149798;149799;149800;149801;149802;149803;149804 119256;119257;119258;119259;119260;119261;119262;119263;119264 119263 9 GATVLPANTPGNVGSGK Unmodified 1538.8053 0.80526994 1132 P22059 OSBP Oxysterol-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 48.795 48.694 2 6.3713E-09 54869 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 87.001 73.648 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17880 1132 16278 149805;149806;149807 119265;119266;119267 119265 3 GAVAEDGDELRTEPEAK Unmodified 1785.8381 0.83808621 1222 P27695 APEX1 DNA-(apurinic or apyrimidinic site) lyase;DNA-(apurinic or apyrimidinic site) lyase, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.46 3.61 5 3 16 2 5 1 1 1 1 1 1 1 1 2 2 1 2 2 35.473 34.124 2;3 1.1209E-35 36870 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 141.38 106.37 2448500000 320160000 1735800000 37030000 4727300 4429900 11099000 6864600 3991500 4152300 7179100 55154000 60490000 7448600 36612000 153340000 17881 1222 16279 149808;149809;149810;149811;149812;149813;149814;149815;149816;149817;149818;149819;149820;149821;149822;149823;149824;149825;149826;149827;149828;149829;149830;149831 119268;119269;119270;119271;119272;119273;119274;119275;119276;119277;119278;119279;119280;119281;119282;119283;119284;119285;119286;119287;119288;119289;119290;119291;119292;119293 119274 24 GAVAEDGDELRTEPEAKK Unmodified 1913.933 0.93304923 1222 P27695 APEX1 DNA-(apurinic or apyrimidinic site) lyase;DNA-(apurinic or apyrimidinic site) lyase, mitochondrial yes yes 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 33.314 28.523 3 0.010653 40139 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.053 36.012 10739000 8919300 0 1819900 0 0 0 0 0 0 0 0 0 0 0 0 17882 1222 16280 149832;149833 119294 119294 1 GAVAIADAIR Unmodified 955.54508 0.5450795 1495 P46060 RANGAP1 Ran GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.597 56.721 2 0.0029636 64513 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 78.334 51.732 413070000 0 0 0 22789000 27965000 34564000 34256000 42049000 20132000 33228000 32124000 49391000 31184000 25363000 60026000 17883 1495 16281 149834;149835;149836;149837;149838;149839;149840;149841;149842;149843;149844;149845 119295;119296;119297;119298;119299;119300;119301;119302;119303;119304;119305;119306;119307;119308;119309 119303 13 GAVAMAETLK Oxidation (M) 1005.5165 0.51648149 1495 P46060 RANGAP1 Ran GTPase-activating protein 1 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 8.04 3.3 3 3 17 1 3 2 1 2 1 1 2 2 2 2 1 1 2 28.697 27.714 2 0.004218 35531 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 87.639 69.654 406970000 507540 91458000 81629000 8918300 16086000 17881000 15819000 0 17636000 34524000 37620000 24528000 22343000 13167000 24856000 17884 1495 16282 149846;149847;149848;149849;149850;149851;149852;149853;149854;149855;149856;149857;149858;149859;149860;149861;149862;149863;149864;149865;149866;149867;149868 119310;119311;119312;119313;119314;119315;119316;119317;119318;119319;119320;119321 119318 2353 11 GAVAMAETLK Unmodified 989.52157 0.52156686 1495 P46060 RANGAP1 Ran GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.21 3.75 4 1 9 1 3 1 1 1 1 1 1 1 1 1 1 47.708 46.126 2 0.004211 57917 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 90.709 59.406 1246700000 53558000 657610000 108260000 0 22095000 43329000 0 33980000 22303000 41422000 0 65119000 49802000 44639000 104630000 17885 1495 16282 149869;149870;149871;149872;149873;149874;149875;149876;149877;149878;149879;149880;149881;149882 119322;119323;119324;119325;119326;119327;119328;119329 119327 6 GAVASVTFDDFHK Unmodified 1392.6674 0.66737948 2444 Q14764 MVP Major vault protein yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 61.745 62.062 3 0.019412 70190 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 24.964 9.577 8613300 0 0 0 0 0 0 0 1749600 0 0 0 0 0 2192000 4671700 17886 2444 16283 149883;149884;149885 119330 119330 1 GAVDAAVPTNIIAAK Unmodified 1409.7878 0.78782897 4917 Q9UI12 ATP6V1H V-type proton ATPase subunit H yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.185 73.25 2 2.28E-06 84345 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 84.188 70.597 244660000 0 0 0 13611000 8523300 30067000 15398000 15407000 12045000 30450000 26020000 25482000 19867000 22457000 25334000 17887 4917 16284 149886;149887;149888;149889;149890;149891;149892;149893;149894;149895;149896;149897 119331;119332;119333;119334;119335;119336;119337;119338;119339;119340;119341;119342 119336 12 GAVDDDVAEADIISTVEFNHSGELLATGDK Unmodified 3087.452 0.45203314 1941 P63151 PPP2R2A Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 94.268 89.823 3;4 4.6031E-67 92803 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 117.04 111.55 96022000 23849000 56761000 15413000 0 0 0 0 0 0 0 0 0 0 0 0 17888 1941 16285 149898;149899;149900;149901;149902 119343;119344;119345;119346;119347;119348 119345 6 GAVDGGLSIPHSTK Unmodified 1337.6939 0.69392858 1508 P46777 RPL5 60S ribosomal protein L5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.6 3.56 7 4 24 2 7 2 2 2 2 2 2 2 2 2 2 2 2 2 46.778 45.161 2;3 2.0379E-28 56464 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 166.29 129.73 4688000000 461650000 1621900000 345440000 172600000 107820000 158320000 143930000 128590000 112360000 171320000 216380000 272130000 263030000 235940000 276600000 17889 1508 16286 149903;149904;149905;149906;149907;149908;149909;149910;149911;149912;149913;149914;149915;149916;149917;149918;149919;149920;149921;149922;149923;149924;149925;149926;149927;149928;149929;149930;149931;149932;149933;149934;149935;149936;149937 119349;119350;119351;119352;119353;119354;119355;119356;119357;119358;119359;119360;119361;119362;119363;119364;119365;119366;119367;119368;119369;119370;119371;119372;119373;119374;119375;119376;119377;119378;119379;119380 119364 21 GAVEAELDPVEYTLRK Unmodified 1788.9258 0.92577901 544 O75817 POP7 Ribonuclease P protein subunit p20 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 75.694 75.936 3 0.0051363 87314 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 33.624 27.207 37426000 0 0 0 0 0 0 0 0 7775800 0 0 0 0 0 29650000 17890 544 16287 149938;149939 119381;119382 119382 2 GAVEDVISR Unmodified 944.49271 0.49270958 265 O15226 NKRF NF-kappa-B-repressing factor yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 40.305 40.364 2 0.013293 44935 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 60.019 25.847 21510000 0 0 0 2824900 0 2893500 2730700 0 2489400 0 0 0 5309100 5262700 0 17891 265 16288 149940;149941;149942;149943;149944;149945 119383 119383 1 GAVGALLVYDIAK Unmodified 1288.7391 0.73908786 2593 Q15907;P62491 RAB11B;RAB11A Ras-related protein Rab-11B;Ras-related protein Rab-11A yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 86.39 86.458 2 0.00027902 100230 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 82.261 62.12 166790000 0 0 0 2664200 5969500 11916000 9712400 17380000 8133000 22366000 22423000 16459000 9340600 10483000 29941000 17892 2593 16289 149946;149947;149948;149949;149950;149951;149952;149953;149954;149955;149956;149957 119384;119385;119386;119387;119388;119389;119390;119391;119392;119393;119394;119395;119396;119397;119398 119393 15 GAVGASVTSSTHEK Unmodified 1329.6525 0.6524577 4689 Q9NW08 POLR3B DNA-directed RNA polymerase III subunit RPC2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 2 2 2 17.769 14.262 2;3 8.5208E-07 21002 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 120.06 84.52 232240000 89116000 101270000 41863000 0 0 0 0 0 0 0 0 0 0 0 0 17893 4689 16290 149958;149959;149960;149961;149962;149963 119399;119400;119401;119402;119403 119401 4 GAVGGTFDR Unmodified 878.42463 0.42463001 2230 Q13057 COASY Bifunctional coenzyme A synthase;Phosphopantetheine adenylyltransferase;Dephospho-CoA kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 23.651 23.762 2 0.038198 24181 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 44.961 26.582 66399000 0 0 0 7356900 7328600 0 10198000 0 4721900 4919600 0 17977000 0 13897000 0 17894 2230 16291 149964;149965;149966;149967;149968;149969;149970 119404 119404 1 GAVHAPYYK Unmodified 1004.508 0.50796571 5194 Q9Y4C2 TCAF1 TRPM8 channel-associated factor 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 29.8 25.387 2 0.0075581 32353 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 100.74 71.593 90926000 73607000 0 17319000 0 0 0 0 0 0 0 0 0 0 0 0 17895 5194 16292 149971;149972 119405 119405 1 GAVIATELK Unmodified 900.52803 0.52803245 278 O15371 EIF3D Eukaryotic translation initiation factor 3 subunit D yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 2 1 2 1 1 1 2 1 1 1 1 43.628 43.768 2 0.0035244 49990 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 107.9 60.152 698910000 0 0 0 43892000 38288000 38394000 43358000 42942000 27818000 65793000 85278000 99163000 67487000 44199000 102300000 17896 278 16293 149973;149974;149975;149976;149977;149978;149979;149980;149981;149982;149983;149984;149985;149986;149987 119406;119407;119408;119409;119410;119411;119412;119413;119414;119415 119415 9 GAVITQIR Unmodified 856.51305 0.51305109 2033 Q00341 HDLBP Vigilin yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.106 38.286 2 0.010188 42160 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 80.462 35.851 468080000 0 0 0 25346000 23724000 49286000 32126000 30443000 17682000 47281000 50723000 56498000 32242000 48479000 54247000 17897 2033 16294 149988;149989;149990;149991;149992;149993;149994;149995;149996;149997;149998;149999 119416;119417;119418;119419;119420;119421;119422 119417 6 GAVIVVSHDAR Unmodified 1122.6146 0.61455605 3421 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 29.34 28.471 2 0.0050345 36561 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 76.827 42.019 34565000 0 0 6785200 0 0 0 0 0 0 0 0 0 16517000 11264000 0 17898 3421 16295 150000;150001;150002 119423;119424;119425;119426 119423 4 GAVLAQGQGDGTVSK Unmodified 1386.7103 0.71030693 1536 P48382 RFX5 DNA-binding protein RFX5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 2 1 1 2 2 1 2 1 1 1 1 26.369 26.545 2 1.8762E-44 28477 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 154.15 144.2 684350000 0 0 0 49210000 50859000 47110000 53920000 73191000 52066000 61021000 58969000 88377000 61627000 42600000 45398000 17899 1536 16296 150003;150004;150005;150006;150007;150008;150009;150010;150011;150012;150013;150014;150015;150016;150017;150018 119427;119428;119429;119430;119431;119432;119433;119434;119435;119436;119437;119438 119434 11 GAVLFGLDPAVIK Unmodified 1298.7598 0.7598233 315 O43301 HSPA12A Heat shock 70 kDa protein 12A yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 94.504 90.846 2 0.0031466 112936 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.162 55.382 33859000 0 29742000 4116200 0 0 0 0 0 0 0 0 0 0 0 0 17900 315 16297 150019;150020 119439;119440 119440 2 GAVLHHLVNK Unmodified 1086.6298 0.62981218 3897 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 24.461 24.458 2 0.012479 26026 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 52.403 27.265 7865700 0 0 0 0 0 7865700 0 0 0 0 0 0 0 0 0 17901 3897 16298 150021 119441 119441 1 GAVLNGGPPSTR Unmodified 1124.5938 0.5938206 2813 Q5VTB9 RNF220 E3 ubiquitin-protein ligase RNF220 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 31.093 31.191 2 0.01397 33788 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 43.77 0.5235 70208000 0 0 0 0 11439000 11660000 13146000 0 0 14024000 0 19938000 0 0 0 17902 2813 16299 150022;150023;150024;150025;150026 119442;119443 119442 2 GAVLPQEISQVNQHHK Unmodified 1783.9329 0.93293007 3295 Q8IZH2 XRN1 5'-3' exoribonuclease 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.81 2.84 4 23 2 2 2 2 2 2 2 2 2 2 2 1 2 2 49.336 48.571 3;4 0.00014849 54361 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 70.281 36.187 471770000 111500000 0 18541000 17324000 14113000 23270000 23972000 24630000 18454000 35742000 36965000 39004000 15343000 37533000 55371000 17903 3295 16300 150027;150028;150029;150030;150031;150032;150033;150034;150035;150036;150037;150038;150039;150040;150041;150042;150043;150044;150045;150046;150047;150048;150049;150050;150051;150052;150053 119444;119445;119446;119447;119448;119449;119450;119451;119452;119453 119444 7 GAVLVCDMSSNFLSK Oxidation (M) 1642.7695 0.76947806 5261 Q9Y617 PSAT1 Phosphoserine aminotransferase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 74.731 69.774 2 2.0429E-41 87975 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 149.49 138.39 376260000 13092000 346530000 16633000 0 0 0 0 0 0 0 0 0 0 0 0 17904 5261 16301 150054;150055;150056;150057 119454;119455;119456;119457;119458 119454 6661 5 GAVLVCDMSSNFLSK Unmodified 1626.7746 0.77456344 5261 Q9Y617 PSAT1 Phosphoserine aminotransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.57 3.85 3 1 3 1 2 1 1 1 1 83.818 81.237 2 7.2393E-11 94288 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 111.63 96.658 561160000 23532000 487840000 17273000 0 0 0 0 0 0 0 3830800 0 0 4456500 24224000 17905 5261 16301 150058;150059;150060;150061;150062;150063;150064 119459;119460;119461;119462;119463;119464;119465;119466 119461 8 GAVPLEMLEIALR Oxidation (M) 1426.7854 0.78538612 1331 P33981 TTK Dual specificity protein kinase TTK yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 90.543 90.713 2 0.0097358 105358 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 40.589 21.318 6151900 0 0 0 0 0 0 791690 801810 1186200 3372200 0 0 0 0 0 17906 1331 16302 150065;150066;150067;150068 119467 119467 1987 1 GAVPLFSTVR Unmodified 1045.592 0.59202969 4511 Q9HCD6 TANC2 Protein TANC2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 72.696 72.757 2 0.034153 83733 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 41.876 25.1 70444000 0 0 0 3528000 5653000 6102700 4592900 5530000 4647800 6650400 7905600 8527100 6375400 0 10931000 17907 4511 16303 150069;150070;150071;150072;150073;150074;150075;150076;150077;150078;150079 119468;119469 119468 2 GAVPRSIPNLAEVK Unmodified 1449.8304 0.83036248 4847 Q9UBN7 HDAC6 Histone deacetylase 6 yes yes 0 0 1 By MS/MS 2 0 1 1 74.765 66.634 3 0.0011013 87936 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.234 47.494 31727000 31727000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17908 4847 16304 150080 119470 119470 1 GAVQSGVDK Unmodified 859.43995 0.43994572 421 O60664 PLIN3 Perilipin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 2 2 1 1 1 1 1 1 6.8119 6.8267 2 0.0049392 4905 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 85.212 40.601 301040000 0 0 0 25459000 38301000 45800000 47634000 68996000 47632000 25889000 0 1326000 0 0 0 17909 421 16305 150081;150082;150083;150084;150085;150086;150087;150088;150089;150090 119471;119472;119473;119474;119475;119476 119472 1 GAVSAEQVIAGFNR Unmodified 1417.7314 0.73137672 4910 Q9UHV9 PFDN2 Prefoldin subunit 2 yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 2 2 1 2 2 77.288 77.461 2;3 7.766E-23 89647 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 150.15 115.97 178690000 0 0 0 0 0 0 2715100 3644800 2094100 2995300 28845000 33439000 7114200 18389000 79452000 17910 4910 16306 150091;150092;150093;150094;150095;150096;150097;150098;150099;150100;150101;150102;150103;150104 119477;119478;119479;119480;119481 119481 3 GAVSSHEAVVDLSGFCK Unmodified 1761.8356 0.83558379 674 O95625 ZBTB11 Zinc finger and BTB domain-containing protein 11 yes yes 0 0 0 By MS/MS 2 0 1 1 73.032 69.947 3 0.0062788 85662 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 38.889 28.102 3493100 0 0 3493100 0 0 0 0 0 0 0 0 0 0 0 0 17911 674 16307 150105 119482 119482 1 GAVSTLLQAPELPTK Unmodified 1523.8559 0.85590853 731 P00519 ABL1 Tyrosine-protein kinase ABL1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.892 80.952 2 1.2456E-05 93726 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 100.93 91.043 91533000 0 0 0 2227400 4774400 7286600 5574700 7028200 5986300 9356800 11118000 11523000 6165700 7270100 13222000 17912 731 16308 150106;150107;150108;150109;150110;150111;150112;150113;150114;150115;150116;150117 119483;119484;119485;119486;119487;119488;119489;119490;119491;119492;119493;119494 119488 12 GAVTDDEVIRK Acetyl (Protein N-term) 1243.6408 0.64083038 2881 Q6I9Y2 THOC7 THO complex subunit 7 homolog yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 43.205 42.147 2 9.8598E-06 47404 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 138.4 116.87 607740000 12006000 221770000 0 19306000 18355000 23966000 21782000 21900000 18684000 30236000 35515000 51087000 41492000 36313000 55328000 17913 2881 16309 150118;150119;150120;150121;150122;150123;150124;150125;150126;150127;150128;150129;150130;150131;150132 119495;119496;119497;119498;119499;119500;119501;119502;119503;119504;119505;119506;119507;119508;119509;119510;119511 119508 17 GAVTGSVEK Unmodified 846.4447 0.44469675 4020 Q99541 PLIN2 Perilipin-2 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 10.398 9.9125 2 0.0051133 8625 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 83.206 43.103 147230000 0 75636000 0 6405800 5239900 6234900 7692500 8000700 4944400 8063800 0 10524000 8218300 6264800 0 17914 4020 16310 150133;150134;150135;150136;150137;150138;150139;150140;150141;150142;150143;150144 119512;119513 119513 2 GAVVEVIQK Unmodified 941.55458 0.55458155 10 A1X283 SH3PXD2B SH3 and PX domain-containing protein 2B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.965 41.143 2 0.0042856 44591 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.323 31.646 158480000 0 0 0 10223000 10428000 11971000 13969000 10670000 10107000 15522000 14676000 17549000 13407000 10694000 19261000 17915 10 16311 150145;150146;150147;150148;150149;150150;150151;150152;150153;150154;150155;150156 119514;119515;119516;119517;119518;119519;119520;119521;119522;119523;119524;119525 119517 12 GAVVGIDLGTTNSCVAVMEGK Oxidation (M) 2093.0133 0.013290163 1399 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 1 0 By MS/MS By MS/MS 2.5 0.5 3 3 2 4 79.343 74.66 2;3 7.3585E-120 93356 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 198.74 183.15 132540000 7168500 125370000 0 0 0 0 0 0 0 0 0 0 0 0 0 17916 1399 16312 150157;150158;150159;150160;150161;150162 119526;119527;119528 119526 2171 3 GAVVGIDLGTTNSCVAVMEGK Unmodified 2077.0184 0.018375541 1399 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By matching 2 0 3 1 1 1 85.693 80.577 2 9.8009E-72 101267 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 188.63 175.82 131900000 25084000 103660000 3156000 0 0 0 0 0 0 0 0 0 0 0 0 17917 1399 16312 150163;150164;150165 119529;119530;119531 119530 3 GAVVPPVHDIYR Unmodified 1321.7143 0.71427009 2222 Q12996 CSTF3 Cleavage stimulation factor subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 56.937 57.13 3 0.003578 64731 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 44.616 37.597 82475000 0 0 0 0 4220600 6744600 5244500 5901700 4942700 8973800 9091800 9485200 7079400 6600800 14190000 17918 2222 16313 150166;150167;150168;150169;150170;150171;150172;150173;150174;150175;150176 119532;119533;119534;119535;119536;119537;119538;119539;119540;119541 119533 10 GAVVVGNVGFGK Unmodified 1102.6135 0.61349341 4288 Q9C0D5 TANC1 Protein TANC1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 60.38 60.275 2 0.044367 68378 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 33.922 14.135 38429000 0 0 0 6500700 8789400 0 1168700 0 0 0 11466000 0 10505000 0 0 17919 4288 16314 150177;150178;150179;150180;150181 119542 119542 1 GAVVVLNMVEASR Oxidation (M) 1359.718 0.71803484 4387 Q9H3U1 UNC45A Protein unc-45 homolog A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 8 1 1 1 1 1 1 1 1 63.35 63.597 2 0.00029759 72739 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 79.693 47.373 49169000 0 0 0 0 0 6260100 6365100 0 2381500 6378500 7135900 10762000 0 2988200 6898600 17920 4387 16315 150182;150183;150184;150185;150186;150187;150188;150189 119543;119544;119545;119546;119547 119544 5843 4 GAVVVLNMVEASR Unmodified 1343.7231 0.72312022 4387 Q9H3U1 UNC45A Protein unc-45 homolog A yes yes 0 0 0 By MS/MS 10 0 1 1 80.143 80.373 2 0.0092164 92563 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.676 21.201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17921 4387 16315 150190 119548 119548 1 GAVWGATLNK Unmodified 1015.5451 0.5450795 5167 Q9Y3F4 STRAP Serine-threonine kinase receptor-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 57.033 51.33 2 0.0024712 63432 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 104.44 65.619 1190900000 733180000 405620000 52077000 0 0 0 0 0 0 0 0 0 0 0 0 17922 5167 16316 150191;150192;150193;150194 119549;119550;119551;119552;119553 119550 4 GAVWTVDEREYQK Unmodified 1579.7631 0.76307078 3227 Q8IVH2 FOXP4 Forkhead box protein P4 yes yes 0 0 1 By MS/MS 2 0 1 1 54.987 51.09 3 0.04118 63957 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 33.273 25.096 7745000 0 0 7745000 0 0 0 0 0 0 0 0 0 0 0 0 17923 3227 16317 150195 119554 119554 1 GAVYSFDPVGSYQR Unmodified 1544.726 0.72595699 1107 P20618 PSMB1 Proteasome subunit beta type-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 73.252 72.711 2 1.8444E-13 83099 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 111.27 97.03 619150000 0 66569000 0 36936000 17742000 19537000 17967000 21807000 16401000 26002000 73850000 79027000 23523000 38578000 181210000 17924 1107 16318 150196;150197;150198;150199;150200;150201;150202;150203;150204;150205;150206;150207;150208;150209 119555;119556;119557;119558;119559;119560;119561;119562;119563;119564;119565;119566;119567 119558 12 GAVYSFDPVGSYQRDSFK Unmodified 2021.9483 0.94830537 1107 P20618 PSMB1 Proteasome subunit beta type-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.5 0.5 2 2 2 1 1 79.247 74.764 3 5.3982E-07 95654 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.226 82.741 626410000 570110000 13227000 43076000 0 0 0 0 0 0 0 0 0 0 0 0 17925 1107 16319 150210;150211;150212;150213 119568;119569;119570;119571;119572;119573;119574;119575 119572 7 GAVYSMVEFNGK Oxidation (M) 1316.6071 0.60708741 2608 Q16531 DDB1 DNA damage-binding protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 56.556 50.858 2 1.5878E-14 68538 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 143.37 129.92 193270000 66289000 106670000 20308000 0 0 0 0 0 0 0 0 0 0 0 0 17926 2608 16320 150214;150215;150216;150217 119576;119577;119578;119579 119578 4253 4 GAVYSMVEFNGK Unmodified 1300.6122 0.61217279 2608 Q16531 DDB1 DNA damage-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 73.759 68.784 2 2.3967E-18 89032 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 158.76 133.86 402960000 206140000 177070000 19748000 0 0 0 0 0 0 0 0 0 0 0 0 17927 2608 16320 150218;150219;150220;150221;150222 119580;119581;119582;119583;119584 119583 5 GAYAAIMEEDDEGSK Oxidation (M) 1600.6563 0.65628202 4517 Q9HCK8 CHD8 Chromodomain-helicase-DNA-binding protein 8 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 36.916 37.226 2 5.3312E-07 41406 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 85.288 60.435 31846000 0 0 0 0 0 3501600 2315500 0 2675000 4883700 0 6874000 4591100 2408900 4596600 17928 4517 16321 150223;150224;150225;150226;150227;150228;150229;150230;150231 119585;119586;119587;119588;119589;119590;119591 119585 5943 7 GAYAAIMEEDDEGSK Unmodified 1584.6614 0.6613674 4517 Q9HCK8 CHD8 Chromodomain-helicase-DNA-binding protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 52.538 51.688 2 1.1388E-07 57628 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.614 65.272 75046000 0 26754000 0 0 0 5623300 0 5960300 5678700 4686800 4555600 0 6043600 6217600 9525600 17929 4517 16321 150232;150233;150234;150235;150236;150237;150238;150239;150240;150241;150242;150243;150244 119592;119593;119594;119595;119596;119597;119598;119599;119600;119601;119602;119603 119596 12 GAYASFGR Unmodified 827.3926 0.3926016 1028 P15923 TCF3 Transcription factor E2-alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 30.102 30.342 2 0.03403 32869 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 53.351 37.244 68773000 0 0 0 0 4106100 5297300 6738500 4624500 0 9183300 8913300 8518700 8422200 0 12969000 17930 1028 16322 150245;150246;150247;150248;150249;150250;150251;150252;150253 119604 119604 1 GAYDIFLNAK Unmodified 1110.571 0.5709599 1464 P42704 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 77.445 76.317 2 0.0016041 94891 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.12 79.616 175480000 8413800 74009000 5516900 4739400 4314200 7919100 5333500 4651700 4660700 8944700 7970400 12189000 6238300 6197700 14384000 17931 1464 16323 150254;150255;150256;150257;150258;150259;150260;150261;150262;150263;150264;150265;150266;150267;150268;150269 119605;119606;119607;119608;119609;119610;119611;119612;119613;119614;119615;119616 119607 12 GAYGALMDEEDEGSK Oxidation (M) 1586.6406 0.64063196 4814;3497 Q9P2D1;Q8TD26 CHD7;CHD6 Chromodomain-helicase-DNA-binding protein 7;Chromodomain-helicase-DNA-binding protein 6 no no 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.4 2.04 1 1 23 2 2 1 2 2 2 2 2 2 2 2 2 2 37.094 36.91 2 4.4831E-06 40482 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 82.171 71.341 94123000 0 13150000 0 2220800 1941600 4716300 5143100 5368600 6838000 8872200 7181900 12365000 10731000 6345200 9249100 17932 4814;3497 16324 150270;150271;150272;150273;150274;150275;150276;150277;150278;150279;150280;150281;150282;150283;150284;150285;150286;150287;150288;150289;150290;150291;150292;150293;150294 119617;119618;119619;119620;119621;119622;119623;119624;119625;119626;119627;119628 119623 5014 12 GAYGALMDEEDEGSK Unmodified 1570.6457 0.64571734 4814;3497 Q9P2D1;Q8TD26 CHD7;CHD6 Chromodomain-helicase-DNA-binding protein 7;Chromodomain-helicase-DNA-binding protein 6 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 50.782 49.731 2 1.0982E-37 62748 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.13 134.13 88628000 0 27135000 0 3490500 6305300 0 6448500 0 5624500 7539100 13774000 0 10120000 8191800 0 17933 4814;3497 16324 150295;150296;150297;150298;150299;150300;150301;150302;150303;150304 119629;119630;119631;119632;119633;119634;119635;119636;119637;119638 119631 10 GAYGVVEK Unmodified 821.42832 0.42831841 1688;1505 P46734;P52564 MAP2K3;MAP2K6 Dual specificity mitogen-activated protein kinase kinase 3;Dual specificity mitogen-activated protein kinase kinase 6 no no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.273 21.477 2 0.017693 22244 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 65.252 35.067 381990000 0 0 0 27213000 17021000 39955000 32492000 19301000 19763000 38937000 43750000 43254000 29001000 28130000 43177000 17934 1505;1688 16325 150305;150306;150307;150308;150309;150310;150311;150312;150313;150314;150315;150316 119639 119639 1 GAYLLMELAK Unmodified 1107.5998 0.59981719 4045 Q99685 MGLL Monoglyceride lipase yes yes 0 0 0 By MS/MS 2 0 1 1 91.586 83.455 2 0.012108 108210 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.23 54.321 20882000 20882000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17935 4045 16326 150317 119640 119640 1 GAYQDRDKPAQIR Unmodified 1516.7746 0.77463852 1642 P50991 CCT4 T-complex protein 1 subunit delta yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 2 2 1 2 2 2 1 16.492 16.638 3;4 1.1819E-07 17255 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 116.01 92.873 891360000 0 0 0 66683000 52632000 35297000 91822000 79550000 20009000 79584000 73525000 165690000 94531000 49344000 82695000 17936 1642 16327 150318;150319;150320;150321;150322;150323;150324;150325;150326;150327;150328;150329;150330;150331;150332;150333;150334;150335;150336;150337;150338;150339 119641;119642;119643;119644;119645;119646;119647;119648;119649;119650;119651;119652;119653;119654;119655;119656;119657;119658;119659;119660 119660 7 GAYREHPYGR Unmodified 1204.5738 0.57375386 2138 Q07666 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 8.9246 9.0376 3 0.025479 7890 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 40.715 29.077 86848000 0 0 0 4272200 2199400 5778900 6770200 3528100 3386000 5803200 0 21722000 9064100 7045500 17279000 17937 2138 16328 150340;150341;150342;150343;150344;150345;150346;150347;150348;150349;150350 119661;119662 119662 2 GCALQCAILSPAFK Unmodified 1534.7636 0.76360482 1337;3633;686 P34932;Q92598;O95757 HSPA4;HSPH1;HSPA4L Heat shock 70 kDa protein 4;Heat shock protein 105 kDa;Heat shock 70 kDa protein 4L no no 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 81.37 81.532 2 0.0018807 93936 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.721 38.299 13869000 0 0 0 0 0 0 0 0 0 0 0 0 0 3654700 10214000 17938 1337;3633;686 16329 150351;150352 119663;119664 119663 2 GCAVVEFK Unmodified 908.44259 0.44258826 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 40.966 41.251 2 0.029825 46117 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 55.902 40.681 105090000 0 0 0 0 0 8832800 9523300 12952000 0 8766600 14328000 21104000 16443000 13140000 0 17939 1681 16330 150353;150354;150355;150356;150357;150358;150359;150360 119665 119665 1 GCDPDAHPK Unmodified 995.41308 0.41307905 5195 Q9Y4E1 FAM21C WASH complex subunit FAM21C yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 5.682 2.3812 2 0.0096112 4390 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.833 61.096 49000000 0 49000000 0 0 0 0 0 0 0 0 0 0 0 0 0 17940 5195 16331 150361;150362 119666 119666 1 GCENLNIVQDK Unmodified 1288.6082 0.60815004 3091 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 43.439 43.403 2 0.0050024 48329 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 60.102 42.59 83737000 0 0 0 13277000 8664000 11545000 0 9902200 0 14969000 25380000 0 0 0 0 17941 3091 16332 150363;150364;150365;150366;150367;150368;150369;150370 119667;119668;119669;119670;119671 119667 5 GCESAVDELK Unmodified 1106.4914 0.49138895 6 A0MZ66 KIAA1598 Shootin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 34.186 32.589 2 0.002807 35147 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.906 34.189 67009000 5891900 35006000 0 0 0 0 0 0 0 0 6973900 0 5565200 5021900 8549700 17942 6 16333 150371;150372;150373;150374;150375;150376 119672;119673;119674;119675;119676 119673 5 GCEVFVGK Unmodified 894.42694 0.4269382 2 A0AV96;Q8TBY0 RBM47;RBM46 RNA-binding protein 47;Probable RNA-binding protein 46 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 2 1 1 1 1 1 1 1 32.16 32.345 2 0.011473 35014 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 76.847 41.646 212150000 0 0 0 9924900 10202000 11605000 12406000 13635000 16840000 15847000 23591000 27244000 27770000 18062000 25021000 17943 2 16334 150377;150378;150379;150380;150381;150382;150383;150384;150385;150386;150387;150388;150389 119677;119678;119679;119680;119681;119682;119683;119684;119685;119686;119687 119683 11 GCEVTPDVNISGQK Unmodified 1502.7035 0.70350699 3735 Q96AC1 FERMT2 Fermitin family homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.381 48.542 2 1.6055E-12 53650 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 110.86 96.166 185980000 0 0 0 9607600 7756700 22615000 12891000 10643000 7950400 16885000 21841000 17336000 17016000 15057000 26379000 17944 3735 16335 150390;150391;150392;150393;150394;150395;150396;150397;150398;150399;150400;150401 119688;119689;119690;119691;119692;119693;119694;119695;119696;119697;119698;119699 119695 12 GCEVVPDVNVAGRK Unmodified 1498.7562 0.75621126 4100 Q9BQL6 FERMT1 Fermitin family homolog 1 yes yes 0 0 1 By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 47.536 47.774 3 0.0071832 53920 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 28.986 21.615 43602000 0 0 0 0 2495900 5943800 2939900 0 2352600 4342300 3226100 4784200 5807700 5634600 6075000 17945 4100 16336 150402;150403;150404;150405;150406;150407;150408;150409;150410;150411 119700 119700 1 GCEVVVSGK Unmodified 933.45897 0.45896661 1156 P23396 RPS3 40S ribosomal protein S3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 19.354 18.806 2 0.0075848 18936 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 72.038 38.225 267040000 29708000 95075000 0 8581800 9115100 7810400 5756300 0 0 14113000 11222000 17714000 14906000 19877000 33160000 17946 1156 16337 150412;150413;150414;150415;150416;150417;150418;150419;150420;150421;150422;150423 119701;119702;119703;119704;119705;119706;119707;119708 119706 8 GCGTVLLSGPRK Unmodified 1243.6707 0.67069072 2133 Q07020 RPL18 60S ribosomal protein L18 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 35.694 35.339 3 0.015291 38780 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 26.13 17.72 218620000 17067000 0 0 12629000 11618000 8717100 10096000 12220000 7556500 15116000 17945000 29328000 22535000 24411000 29383000 17947 2133 16338 150424;150425;150426;150427;150428;150429;150430;150431;150432;150433;150434;150435;150436 119709;119710;119711;119712;119713;119714 119711 6 GCHLLVATPGR Unmodified 1179.6183 0.61826122 170 O00571;O15523 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 2 1 2 2 1 2 40.641 40.922 2;3 0.0075632 44646 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 66.056 51.595 202180000 0 0 0 27945000 27585000 10029000 0 0 24602000 10890000 19558000 27321000 0 33943000 20307000 17948 170 16339 150437;150438;150439;150440;150441;150442;150443;150444;150445;150446;150447;150448;150449 119715;119716;119717;119718;119719;119720;119721;119722 119718 4 GCILTLVER Unmodified 1059.5747 0.57466507 4033 Q99613;B5ME19 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 75.61 75.592 2 0.02708 87098 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 49.554 28.254 32787000 0 0 0 3087900 1654400 0 0 0 3384800 4133000 0 8150600 6056200 6320600 0 17949 4033 16340 150450;150451;150452;150453;150454;150455;150456;150457 119723;119724;119725;119726;119727 119726 5 GCITIIGGGDTATCCAK Unmodified 1753.7797 0.77972517 733 P00558 PGK1 Phosphoglycerate kinase 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 62.124 56.786 2 4.859E-05 72806 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.202 71.959 53170000 0 53170000 0 0 0 0 0 0 0 0 0 0 0 0 0 17950 733 16341 150458;150459 119728 119728 1 GCLGEAFLNGK Unmodified 1164.5597 0.55974328 1187 P25391 LAMA1 Laminin subunit alpha-1 yes yes 0 0 0 By MS/MS 2 0 1 1 73.075 64.879 2 0.063905 86061 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.27 37.121 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17951 1187 16342 150460 119729 119729 1 GCLLYGPPGTGK Unmodified 1218.6067 0.60669348 1898 P62333 PSMC6 26S protease regulatory subunit 10B yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 55.911 54.486 2 6.6564E-05 73071 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 119.68 96.94 545570000 86270000 300700000 4129800 15896000 20196000 11275000 7518200 3873600 4016000 22052000 22999000 27668000 0 9209800 9761700 17952 1898 16343 150461;150462;150463;150464;150465;150466;150467;150468;150469;150470;150471;150472;150473;150474;150475 119730;119731;119732;119733;119734;119735;119736;119737;119738;119739;119740;119741;119742;119743;119744 119738 14 GCLTEQTYPEVVR Unmodified 1550.7399 0.73989249 2610 Q16537 PPP2R5E Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform yes yes 0 0 0 By MS/MS 10 0 1 1 57.716 58.317 2 0.012743 65635 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.404 36.618 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17953 2610 16344 150476 119745 119745 1 GCLVTASADK Unmodified 1020.491 0.49099502 2325 Q13610 PWP1 Periodic tryptophan protein 1 homolog yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 22.63 23.121 2 0.030985 23148 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 42.864 14.758 14399000 0 0 0 0 0 0 0 0 0 0 0 0 0 3786800 10613000 17954 2325 16345 150477;150478 119746 119746 1 GCMEEKPQEVQTSR Unmodified 1677.7451 0.74505423 3808 Q96EB6 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment yes yes 0 0 1 By MS/MS 10 0 1 1 21.232 21.557 3 0.0055861 21318 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 41.967 37.651 7452800 0 0 0 0 0 0 0 0 0 0 0 0 0 7452800 0 17955 3808 16346 150479 119747 119747 1 GCNPTHLADFTQVQTIQYSNSEDK Unmodified 2752.2399 0.23987229 2114 Q05397 PTK2 Focal adhesion kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.71 3.81 2 1 4 2 1 1 1 1 1 75.562 74.09 3 2.2852E-27 85240 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.767 82.467 103950000 0 63982000 4984300 0 0 7581100 0 0 6320100 8361900 0 0 0 0 12724000 17956 2114 16347 150480;150481;150482;150483;150484;150485;150486 119748;119749;119750;119751;119752;119753;119754 119751 7 GCPPLFTTLK Unmodified 1132.5951 0.59506616 2895 Q6N069 NAA16 N-alpha-acetyltransferase 16, NatA auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 73.642 73.663 2 0.016128 84924 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 49.715 36.337 223970000 0 0 0 4285500 12644000 10703000 11330000 21695000 17879000 27982000 48213000 69243000 0 0 0 17957 2895 16348 150487;150488;150489;150490;150491;150492;150493;150494;150495 119755;119756;119757;119758 119755 4 GCPPVFNTLR Unmodified 1159.5808 0.58081308 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 62.136 62.377 2 0.0031171 71452 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 91.318 83.378 1115500000 0 0 0 0 0 0 62115000 72919000 54795000 159520000 255670000 510530000 0 0 0 17958 4226 16349 150496;150497;150498;150499;150500;150501 119759;119760;119761;119762;119763;119764;119765;119766 119765 8 GCQAEADRAEVSR Unmodified 1447.6474 0.64738909 2739 Q5JTH9 RRP12 RRP12-like protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 13.36 13.501 3 0.0051698 12778 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 45.257 37.501 26809000 0 0 0 1921100 2218800 2558900 2034400 1885100 1851400 0 2575700 4830900 0 0 6932200 17959 2739 16350 150502;150503;150504;150505;150506;150507;150508;150509;150510 119767;119768;119769 119767 3 GCRGTLPAQEGPSGSK Unmodified 1600.7628 0.7627532 3004 Q6ZRI6 C15orf39 Uncharacterized protein C15orf39 yes yes 0 0 1 By MS/MS 2 0 2 2 23.513 18.537 2;3 0.00024093 26389 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.342 27.649 17067000 17067000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17960 3004 16351 150511;150512 119770;119771 119771 1 GCSFLPDPYQK Unmodified 1310.5965 0.59652272 844 P07602 PSAP Prosaposin;Saposin-A;Saposin-B-Val;Saposin-B;Saposin-C;Saposin-D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9 2.65 1 7 1 1 1 1 1 1 1 1 69.109 68.59 2 0.00027537 79410 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 113.66 102.44 131380000 0 84776000 0 12336000 0 0 3006300 0 0 0 7225600 8853300 5089800 3868000 6223800 17961 844 16352 150513;150514;150515;150516;150517;150518;150519;150520 119772;119773;119774;119775;119776 119776 5 GCSNKPTTVNK Unmodified 1204.587 0.58702067 3460 Q8NHV4 NEDD1 Protein NEDD1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 6.3681 3.0319 3 0.023997 5993 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 39.293 21.484 131250000 114990000 16251000 0 0 0 0 0 0 0 0 0 0 0 0 0 17962 3460 16353 150521;150522 119777 119777 1 GCTATLGNFAK Unmodified 1138.5441 0.54409322 1027 P15880 RPS2 40S ribosomal protein S2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 46.319 46.488 2 0.0025968 52701 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 66.962 51.32 176020000 0 0 0 11328000 18329000 7990400 11285000 0 0 0 24088000 25060000 25247000 28044000 24652000 17963 1027 16354 150523;150524;150525;150526;150527;150528;150529;150530;150531 119778;119779;119780;119781;119782;119783;119784 119784 5 GCTDNLTLTVAR Unmodified 1319.6503 0.65034921 119 O00151 PDLIM1 PDZ and LIM domain protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 56.898 56.372 2 2.3682E-05 63144 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.658 71.872 146260000 0 22337000 0 0 0 0 0 0 0 9153100 22865000 19351000 7900000 21081000 43577000 17964 119 16355 150532;150533;150534;150535;150536;150537;150538 119785;119786;119787;119788;119789;119790;119791;119792;119793;119794;119795 119789 11 GCTDNLTLTVARSEHK Unmodified 1800.8788 0.87884559 119 O00151 PDLIM1 PDZ and LIM domain protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 50.863 44.226 2;3 1.1036E-22 61032 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 124.86 102.32 139120000 129560000 0 9567600 0 0 0 0 0 0 0 0 0 0 0 0 17965 119 16356 150539;150540;150541 119796;119797;119798 119797 3 GCTERFVCSPDEVMDTIDEGK Unmodified 2444.0294 0.029410512 1328 P33176 KIF5B Kinesin-1 heavy chain yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 81.636 76.499 3 1.5532E-10 97373 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 92.034 81.828 126160000 46950000 65796000 13413000 0 0 0 0 0 0 0 0 0 0 0 0 17966 1328 16357 150542;150543;150544 119799;119800;119801 119800 3 GCTERFVCSPDEVMDTIDEGK Oxidation (M) 2460.0243 0.024325134 1328 P33176 KIF5B Kinesin-1 heavy chain yes yes 0 1 1 By MS/MS 2 0 1 1 71.947 63.708 3 0.00053489 84648 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.483 51.429 6899300 6899300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17967 1328 16357 150545 119802 119802 1976 1 GCTPSGEGADSEPR Unmodified 1418.5732 0.5732211 3686 Q92917 GPKOW G patch domain and KOW motifs-containing protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.047 14.21 2 3.9168E-12 13600 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 125.74 122.48 166280000 0 0 0 8737000 10265000 10760000 10763000 6050100 5502300 17410000 17502000 17586000 13755000 16883000 31071000 17968 3686 16358 150546;150547;150548;150549;150550;150551;150552;150553;150554;150555;150556;150557 119803;119804;119805;119806;119807;119808;119809;119810;119811;119812;119813;119814 119803 12 GCVITISGR Unmodified 961.5015 0.50150012 120 O00154 ACOT7 Cytosolic acyl coenzyme A thioester hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 43.515 43.578 2 0.0037345 49318 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 101.33 25.635 219350000 0 0 0 14777000 41186000 26335000 0 0 0 24501000 35660000 76885000 0 0 0 17969 120 16359 150558;150559;150560;150561;150562;150563 119815;119816;119817;119818;119819 119819 5 GCVQTLVEK Unmodified 1032.5274 0.52738052 5238 Q9Y5L0 TNPO3 Transportin-3 yes yes 0 0 0 By MS/MS 2 0 1 1 39.329 34.317 2 0.0073052 44878 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.302 62.368 39959000 0 39959000 0 0 0 0 0 0 0 0 0 0 0 0 0 17970 5238 16360 150564 119820;119821 119820 2 GCWDSIHVVEVQEK Unmodified 1684.7879 0.78790532 1525 P47756 CAPZB F-actin-capping protein subunit beta yes yes 0 0 0 By MS/MS By MS/MS 2.67 0.471 1 2 2 1 74.104 68.626 3 0.0004968 83573 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 67.275 55.584 34210000 23157000 11053000 0 0 0 0 0 0 0 0 0 0 0 0 0 17971 1525 16361 150565;150566;150567 119822;119823;119824 119823 3 GCYNTRLK Unmodified 1010.4967 0.4967491 3608 Q92499 DDX1 ATP-dependent RNA helicase DDX1 yes yes 0 0 1 By MS/MS 2 0 1 1 17.438 13.229 2 0.035593 19138 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.31 45.743 20399000 20399000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17972 3608 16362 150568 119825 119825 0 GDAASSPAPAASVGSSQGGAR Unmodified 1799.8398 0.83981755 3559 Q8WVB6 CHTF18 Chromosome transmission fidelity protein 18 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.011 28.206 2 1.6112E-11 30049 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 83.692 57.574 80771000 0 0 0 4250000 4792400 6053400 6563900 3846100 5197200 5865300 7696100 12202000 9084600 5076000 10144000 17973 3559 16363 150569;150570;150571;150572;150573;150574;150575;150576;150577;150578;150579;150580 119826;119827;119828;119829;119830;119831;119832;119833 119831 8 GDAASSPAPAASVGSSQGGARK Unmodified 1927.9348 0.93478057 3559 Q8WVB6 CHTF18 Chromosome transmission fidelity protein 18 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.431 21.635 3 8.1175E-14 22520 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 75.064 70.962 204810000 0 0 0 9087800 10928000 19780000 14806000 15717000 10880000 19732000 20636000 18638000 20882000 23056000 20670000 17974 3559 16364 150581;150582;150583;150584;150585;150586;150587;150588;150589;150590;150591;150592 119834;119835;119836;119837;119838;119839;119840 119838 5 GDAAVRDELMAAVR Unmodified 1472.7406 0.7405612 2471 Q15008 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 67.532 67.798 3 0.00063156 77009 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.482 30.271 44488000 0 0 0 0 0 4635600 0 0 0 13380000 7282300 8631700 0 0 10559000 17975 2471 16365 150593;150594;150595;150596;150597 119841;119842;119843;119844;119845;119846 119845 6 GDADQASNILASFGLSAR Unmodified 1791.8751 0.87514042 1473 P43243 MATR3 Matrin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 91.742 91.815 2 2.7057E-05 106399 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.291 70.401 49208000 0 0 0 993040 2238300 2224400 1695400 3373400 2936900 8967700 7545400 5308800 1496600 3316600 9111100 17976 1473 16366 150598;150599;150600;150601;150602;150603;150604;150605;150606;150607;150608;150609 119847;119848;119849;119850;119851;119852;119853;119854 119849 8 GDADVSVPK Unmodified 886.43961 0.43961137 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.784 24.987 2 0.019553 25154 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.878 35.554 315440000 0 0 0 24735000 14221000 16780000 20105000 26567000 21337000 24520000 19634000 37190000 41241000 23740000 45377000 17977 2172 16367 150610;150611;150612;150613;150614;150615;150616;150617;150618;150619;150620;150621 119855;119856;119857 119855 2 GDAGPGSGAASGTVVAAAAGGPGPGAGGVAAAGPAPAPPTGGSGGSGAGGSGSAR Unmodified 4195.9867 0.98671616 1132 P22059 OSBP Oxysterol-binding protein 1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 71.679 71.754 4 0.00019949 82496 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 11.857 7.413 34285000 0 0 0 0 4163700 5010600 3952700 4205600 0 0 0 0 0 4779900 12172000 17978 1132 16368 150622;150623;150624;150625;150626;150627 119858;119859;119860;119861 119859 4 GDAHLRPTSLVQR Unmodified 1448.7848 0.78480927 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.657 36.838 3 5.6072E-05 40769 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 73.91 59.946 435120000 0 0 0 22771000 13078000 42701000 21633000 28895000 28815000 35132000 36144000 61506000 47591000 29602000 67256000 17979 4285 16369 150628;150629;150630;150631;150632;150633;150634;150635;150636;150637;150638;150639 119862;119863;119864;119865;119866;119867;119868;119869;119870;119871;119872;119873;119874 119868 11 GDAMGRVDEEPTTLPSGEAK Unmodified 2058.9528 0.9527984 5195 Q9Y4E1 FAM21C WASH complex subunit FAM21C yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 53.921 48.573 3 0.00018285 59997 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 44.089 40.54 28169000 0 28169000 0 0 0 0 0 0 0 0 0 0 0 0 0 17980 5195 16370 150640;150641 119875;119876;119877 119877 3 GDAMGRVDEEPTTLPSGEAK Oxidation (M) 2074.9477 0.94771302 5195 Q9Y4E1 FAM21C WASH complex subunit FAM21C yes yes 0 1 1 By MS/MS 3 0 1 1 43.379 38.605 3 0.0014121 48086 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 43.116 36.699 5542400 0 5542400 0 0 0 0 0 0 0 0 0 0 0 0 0 17981 5195 16370 150642 119878 119878 6591 1 GDAMIMEETGK Unmodified 1180.5104 0.51040983 5067 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 3 1 1 1 1 1 1 1 1 1 1 41.672 40.099 2 9.5993E-05 50872 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.75 103.23 1000100000 25773000 911920000 0 0 1681200 4152700 2753400 2801000 0 4375600 16339000 16120000 3413600 10743000 0 17982 5067 16371 150643;150644;150645;150646;150647;150648;150649;150650;150651;150652;150653;150654;150655;150656 119879;119880;119881;119882;119883;119884;119885;119886;119887;119888;119889;119890;119891;119892 119884 14 GDAMIMEETGK 2 Oxidation (M) 1212.5002 0.50023907 5067 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 5.57 3.85 6 2 6 1 5 2 1 1 1 1 1 1 16.382 14.729 2 0.00062204 14997 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 70.1 56.521 233590000 8777800 181290000 3752600 0 0 1113200 0 1950700 0 0 9380700 9329800 0 5932700 12058000 17983 5067 16371 150657;150658;150659;150660;150661;150662;150663;150664;150665;150666;150667;150668;150669;150670 119893;119894;119895;119896;119897;119898;119899;119900;119901;119902;119903 119903 6435;6436 11 GDAMIMEETGK Oxidation (M) 1196.5053 0.50532445 5067 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3.92 3.36 1 7 2 3 2 7 1 1 1 1 36.761 33.854 2 4.9882E-06 35968 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.68 97.549 932380000 26375000 881750000 2623700 0 0 0 0 0 0 0 5188700 0 0 4228500 12207000 17984 5067 16371 150671;150672;150673;150674;150675;150676;150677;150678;150679;150680;150681;150682;150683 119904;119905;119906;119907;119908;119909;119910;119911;119912;119913;119914;119915;119916;119917;119918 119906 6435;6436 13 GDANSEVTVYYQSGTR Unmodified 1745.7857 0.78565671 375 O43847 NRD1 Nardilysin yes yes 0 0 0 By MS/MS 10 0 1 1 48.225 48.948 2 1.0334E-08 54208 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.202 76.512 11447000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11447000 17985 375 16372 150684 119919 119919 1 GDAPSPEEK Acetyl (Protein N-term) 970.42436 0.42435524 1740 P54577 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.45 3.89 4 1 6 2 2 1 1 1 1 1 1 1 17.487 16.964 2 0.0066965 18048 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 52.867 32.385 68591000 3847300 12969000 2011500 0 0 6460500 0 3250600 2462100 0 0 10165000 0 8769200 18655000 17986 1740 16373 150685;150686;150687;150688;150689;150690;150691;150692;150693;150694;150695 119920;119921;119922;119923;119924;119925;119926;119927 119923 8 GDASLLQDGVLAEK Unmodified 1414.7304 0.73037367 3962 Q96QT6 PHF12 PHD finger protein 12 yes yes 0 0 0 By MS/MS 2 0 1 1 77.195 72.357 2 0.0016872 90313 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.815 51.442 31156000 0 31156000 0 0 0 0 0 0 0 0 0 0 0 0 0 17987 3962 16374 150696 119928 119928 1 GDATPEGEK Unmodified 902.39814 0.39814049 5206 Q9Y4L1 HYOU1 Hypoxia up-regulated protein 1 yes yes 0 0 0 By MS/MS 1 0 1 1 106.75 112.01 2 0.014201 92760 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 82.279 64.144 45435000 45435000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17988 5206 16375 150697 119929 119929 1 GDATVSYEDPPTAK Unmodified 1449.6624 0.66235368 2065 Q01844 EWSR1 RNA-binding protein EWS yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.88 3.69 2 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 46.321 46.11 2 2.4225E-29 92774 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 139.32 96.016 2064200000 85340000 75384000 0 100490000 122180000 129390000 202240000 118740000 111370000 125540000 174360000 293370000 200500000 145770000 179500000 17989 2065 16376 150698;150699;150700;150701;150702;150703;150704;150705;150706;150707;150708;150709;150710;150711;150712;150713 119930;119931;119932;119933;119934;119935;119936;119937;119938;119939;119940;119941;119942;119943;119944;119945;119946;119947;119948 119937 16 GDAVGRVDEEPTTLPSGEAK Unmodified 2026.9807 0.98072771 2840 Q641Q2 FAM21A WASH complex subunit FAM21A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 48.296 47.179 3 1.1616E-07 53423 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 70.094 61.301 217200000 9345500 72486000 0 6521500 5740700 8734300 9696700 6581900 9719100 12875000 11192000 20554000 13745000 10919000 19088000 17990 2840 16377 150714;150715;150716;150717;150718;150719;150720;150721;150722;150723;150724;150725;150726;150727;150728 119949;119950;119951;119952;119953;119954;119955;119956;119957;119958;119959;119960;119961;119962;119963;119964;119965 119959 17 GDAVRDVDIIDHHDNTYTVK Unmodified 2282.0927 0.092737771 1124 P21333 FLNA Filamin-A yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 4.2 3.53 1 8 2 4 7 3 1 1 1 2 62.611 59.46 3;4;5 8.6721E-10 73947 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.776 79.794 619320000 483550000 73087000 108190 0 0 0 0 0 0 0 0 15489000 3917100 0 43163000 17991 1124 16378 150729;150730;150731;150732;150733;150734;150735;150736;150737;150738;150739;150740;150741;150742;150743 119966;119967;119968;119969;119970;119971;119972;119973;119974;119975;119976;119977;119978;119979 119967 11 GDCVECMACSDNTVRAGLTPK Unmodified 2339.9967 0.9966706 1338 P34949 MPI Mannose-6-phosphate isomerase yes yes 0 0 1 By MS/MS 2 0 1 1 63.546 57.639 3 0.00050946 73976 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 53.585 44.538 15170000 0 15170000 0 0 0 0 0 0 0 0 0 0 0 0 0 17992 1338 16379 150744 119980 119980 1 GDCYQVLIEDCIPVLK Unmodified 1920.9325 0.93252065 1701 P52788 SMS Spermine synthase yes yes 0 0 0 By MS/MS By matching 2 0 4 2 2 94.175 91.166 2;3 0.026388 112906 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 37.438 26.176 47898000 0 47272000 626350 0 0 0 0 0 0 0 0 0 0 0 0 17993 1701 16380 150745;150746;150747;150748 119981;119982 119981 0 GDDEGIFISR Unmodified 1107.5197 0.51965261 2381 Q14160 SCRIB Protein scribble homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 54.017 54.337 2 0.010434 60546 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.013 41.856 37319000 0 0 0 0 0 5510800 0 0 5630900 4365800 4555500 3409700 4698200 3407900 5740100 17994 2381 16381 150749;150750;150751;150752;150753;150754;150755;150756;150757 119983;119984;119985;119986;119987;119988;119989 119984 7 GDDGPDIADEESRGLEGK Unmodified 1858.8181 0.81807905 202 O14686 KMT2D Histone-lysine N-methyltransferase 2D yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 47.904 46.755 3 0.0019175 52118 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 40.432 34.4 116370000 11054000 30938000 0 0 4844800 5206500 6304700 4385400 4728000 8561900 7054300 9316100 9475000 5760000 8736400 17995 202 16382 150758;150759;150760;150761;150762;150763;150764;150765;150766;150767;150768;150769;150770;150771 119990;119991;119992;119993;119994;119995;119996 119995 7 GDDLLPAGTEDYIHIR Unmodified 1783.8741 0.87407779 427;1442 O60739;P41567 EIF1B;EIF1 Eukaryotic translation initiation factor 1b;Eukaryotic translation initiation factor 1 no no 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 2 1 80.137 80.281 3 0.0018741 92463 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.249 38.93 60073000 0 0 0 0 0 2553200 0 2340000 0 0 3940700 5916200 0 5203300 40119000 17996 427;1442 16383 150772;150773;150774;150775;150776;150777;150778 119997;119998;119999;120000 119997 3 GDDLQAIK Unmodified 858.4447 0.44469675 851 P07910;P0DMR1;O60812;B7ZW38;B2RXH8 HNRNPC;HNRNPCL4;HNRNPCL1;HNRNPCL3;HNRNPCL2 Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.64 2.9 1 1 9 2 1 1 1 1 1 1 1 1 1 29.425 28.81 2 0.011827 31125 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 76.035 25.908 3467400000 0 1148500000 0 210240000 0 233870000 223600000 0 226880000 314210000 278300000 278150000 305840000 0 247830000 17997 851 16384 150779;150780;150781;150782;150783;150784;150785;150786;150787;150788;150789 120001;120002;120003;120004;120005;120006;120007;120008;120009;120010;120011;120012;120013;120014 120003 14 GDDLQAIKK Unmodified 986.53966 0.53965977 851 P07910 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 21.014 20.573 2 0.0048549 25875 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 131.06 86.667 368410000 0 129060000 0 17810000 16709000 0 19862000 18852000 3949400 20095000 25230000 32778000 22687000 26196000 35187000 17998 851 16385 150790;150791;150792;150793;150794;150795;150796;150797;150798;150799;150800;150801;150802 120015;120016;120017;120018;120019;120020;120021 120017 6 GDDLSTAILK Unmodified 1031.5499 0.5498901 1755 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 6.9 3.81 6 2 12 2 4 2 1 1 1 1 1 1 1 1 1 1 1 1 62.941 61.132 2 0.0028756 80456 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 99.802 76.227 5260000000 133450000 4453000000 29586000 23852000 17732000 36150000 26125000 31797000 22203000 39340000 92852000 80765000 36636000 73428000 163050000 17999 1755 16386 150803;150804;150805;150806;150807;150808;150809;150810;150811;150812;150813;150814;150815;150816;150817;150818;150819;150820;150821;150822 120022;120023;120024;120025;120026;120027;120028;120029;120030;120031;120032;120033;120034;120035;120036;120037;120038;120039;120040 120033 17 GDDQLELIK Unmodified 1029.5342 0.53424004 851 P07910 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 56.261 56.669 2 0.02342 63449 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.066 28.024 9015300 0 0 0 0 0 0 0 0 0 0 0 0 0 1092100 7923200 18000 851 16387 150823;150824 120041 120041 1 GDDQLSGAQQWMTK Oxidation (M) 1579.6937 0.69367058 3653 Q92733 PRCC Proline-rich protein PRCC yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 45.865 46.105 2 0.00036974 50759 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.953 51.688 47612000 0 0 0 0 3071700 5613600 0 0 5700000 6976400 0 6449700 6500700 4174200 9125900 18001 3653 16388 150825;150826;150827;150828;150829;150830;150831;150832 120042;120043;120044;120045;120046;120047 120043 5166 6 GDDQLSGAQQWMTK Unmodified 1563.6988 0.69875596 3653 Q92733 PRCC Proline-rich protein PRCC yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.53 1.88 1 16 1 2 2 1 1 1 2 1 2 1 1 1 1 63.144 62.822 2 2.5875E-26 71273 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 183.33 176.21 257790000 0 67759000 0 13466000 10269000 9112000 11230000 7721300 12859000 14661000 21799000 18428000 11746000 18775000 39963000 18002 3653 16388 150833;150834;150835;150836;150837;150838;150839;150840;150841;150842;150843;150844;150845;150846;150847;150848;150849 120048;120049;120050;120051;120052;120053;120054;120055;120056;120057;120058;120059;120060 120051 12 GDDQSRQGGAPDAGQE Unmodified 1586.6557 0.65570517 1570 P49368 CCT3 T-complex protein 1 subunit gamma yes yes 0 0 1 By MS/MS By MS/MS 1.5 0.5 2 2 2 2 11.308 7.7386 2 6.1632E-50 91931 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 173.06 161.71 38205000 22960000 15246000 0 0 0 0 0 0 0 0 0 0 0 0 0 18003 1570 16389 150850;150851;150852;150853 120061;120062;120063;120064 120061 4 GDDTDTRDDISILATGCK Unmodified 1951.8793 0.8792991 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 0 1 By MS/MS By matching By MS/MS 6.25 3.77 1 1 2 2 1 1 65.225 62.764 3 0.0010383 71353 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.082 41.238 64795000 0 50435000 0 0 0 0 0 0 0 0 0 0 6814500 0 7546200 18004 2203 16390 150854;150855;150856;150857 120065;120066;120067 120066 3 GDEDSLMEK Unmodified 1022.4226 0.42264068 2993 Q6XZF7 DNMBP Dynamin-binding protein yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 24.371 24.812 2 0.0055928 25828 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 77.318 49.063 8447000 0 0 0 0 0 0 0 0 0 2469100 2935100 3042800 0 0 0 18005 2993 16391 150858;150859;150860 120068;120069 120069 2 GDEILAATMK Unmodified 1047.527 0.52704617 2274 Q13356 PPIL2 Peptidyl-prolyl cis-trans isomerase-like 2 yes yes 0 0 0 By MS/MS 2 0 1 1 59.518 53.676 2 0.0065443 69017 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.645 63.914 34594000 0 34594000 0 0 0 0 0 0 0 0 0 0 0 0 0 18006 2274 16392 150861 120070 120070 1 GDEMDAMIPEREMK Acetyl (Protein N-term);3 Oxidation (M) 1740.7005 0.7004718 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 1 3 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 34.699 34.719 2 3.398E-05 38341 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 77.379 69.275 16863000 0 0 0 0 2580100 0 3576000 0 3883000 0 0 0 6823800 0 0 18007 1364 16393 150862;150863;150864;150865 120071;120072;120073;120074 120073 2114;2115;2116 4 GDEMDAMIPEREMK Acetyl (Protein N-term);Oxidation (M) 1708.7106 0.71064256 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 1 1 1 By MS/MS 2 0 2 2 65.697 59.801 2 1.675E-31 72746 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 147.62 139.52 48329000 0 48329000 0 0 0 0 0 0 0 0 0 0 0 0 0 18008 1364 16393 150866;150867 120075;120076;120077 120076 2114;2115;2116 3 GDEMDAMIPEREMK Acetyl (Protein N-term) 1692.7157 0.71572793 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 1 0 1 By MS/MS By MS/MS 5 3.56 1 1 1 2 1 76.574 72.377 2 5.6513E-06 90378 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.39 94.734 51595000 0 51595000 0 0 0 0 0 0 0 0 0 0 0 0 0 18009 1364 16393 150868;150869;150870 120078;120079 120078 2 GDETPLTNVK Unmodified 1072.5401 0.5400537 4326 Q9H0E9 BRD8 Bromodomain-containing protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 34.362 34.4 2 0.0077573 38120 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 61.691 45.358 83845000 0 0 0 10020000 0 16708000 0 0 20385000 16666000 0 0 20064000 0 0 18010 4326 16394 150871;150872;150873;150874;150875;150876 120080;120081;120082;120083 120080 3 GDEVDGVDEVAK Unmodified 1231.5568 0.55682598 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 36.449 35.784 2 0.0024 45702 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.054 56.318 115090000 5810600 0 0 5315500 4317500 21991000 8629300 0 10800000 0 0 0 13271000 13752000 31204000 18011 894 16395 150877;150878;150879;150880;150881;150882;150883;150884;150885 120084;120085;120086;120087;120088;120089;120090 120087 7 GDFCIQVGR Unmodified 1050.4917 0.49166372 1138;1022 P22392;O60361;P15531 NME2;NME2P1;NME1 Nucleoside diphosphate kinase B;Putative nucleoside diphosphate kinase;Nucleoside diphosphate kinase A no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 2 1 1 2 2 1 1 2 1 1 1 57.32 57.407 2 0.0031625 64774 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 92.491 75.549 5968700000 0 0 0 136950000 489310000 423260000 839100000 606580000 882860000 489140000 821710000 1105100000 15052000 36087000 123560000 18012 1138;1022 16396 150886;150887;150888;150889;150890;150891;150892;150893;150894;150895;150896;150897;150898;150899;150900;150901 120091;120092;120093;120094;120095;120096;120097;120098;120099;120100;120101;120102;120103;120104;120105;120106;120107;120108;120109;120110;120111;120112;120113;120114;120115;120116;120117;120118;120119;120120;120121;120122;120123;120124;120125;120126;120127 120096 37 GDFDACEELIEK Unmodified 1424.613 0.61296065 4988 Q9UL63 MKLN1 Muskelin yes yes 0 0 0 By MS/MS 2 0 2 2 70.246 64.377 2 0.012946 81615 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.641 40.651 23455000 0 23455000 0 0 0 0 0 0 0 0 0 0 0 0 0 18013 4988 16397 150902;150903 120128;120129 120128 2 GDFDENLNYPEQK Unmodified 1567.6791 0.67906638 4850 Q9UBQ0 VPS29 Vacuolar protein sorting-associated protein 29 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 54.593 54.587 2 0.0024326 60999 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 58.676 53.035 54124000 0 0 0 5815000 2312700 4038400 2956900 0 0 6589100 0 0 0 10278000 22134000 18014 4850 16398 150904;150905;150906;150907;150908;150909;150910;150911 120130;120131;120132;120133 120132 4 GDFDVSVPK Unmodified 962.47091 0.4709115 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 54.355 54.491 2 0.020738 60624 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.867 33.39 203210000 0 0 0 18166000 13765000 14441000 17289000 19941000 14900000 13283000 17095000 15289000 18694000 16976000 23367000 18015 2172 16399 150912;150913;150914;150915;150916;150917;150918;150919;150920;150921;150922;150923 120134;120135;120136 120134 3 GDFETFIK Unmodified 955.4651 0.46509784 4653 Q9NUQ8 ABCF3 ATP-binding cassette sub-family F member 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 67.298 67.447 2 0.012197 77437 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 75.189 61.982 155350000 0 0 0 0 9701800 14099000 11469000 13755000 0 18927000 19005000 20594000 15901000 14894000 17001000 18016 4653 16400 150924;150925;150926;150927;150928;150929;150930;150931;150932;150933 120137;120138;120139;120140;120141 120137 5 GDFGPTLGLLRPAPEPEAEGSAVK Unmodified 2407.2383 0.23833938 2450 Q14814 MEF2D Myocyte-specific enhancer factor 2D yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.498 81.559 3 2.8544E-27 94426 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 88.79 84.839 179370000 0 0 0 3966300 5816900 16988000 9958200 12451000 16790000 19196000 11939000 13907000 8499100 14413000 45449000 18017 2450 16401 150934;150935;150936;150937;150938;150939;150940;150941;150942;150943;150944;150945 120142;120143;120144;120145;120146;120147;120148;120149;120150;120151;120152;120153 120148 12 GDFILVGDLMR Unmodified 1234.638 0.63799361 2608 Q16531 DDB1 DNA damage-binding protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 90.285 90.424 2 0.014077 104683 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.683 34.952 3043100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3043100 18018 2608 16402 150946 120154 120154 1 GDFSMQQHGQPQQR Unmodified 1642.727 0.7270364 4814 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 24.068 24.314 3 0.00031396 24638 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.54 56.708 62636000 0 0 0 0 3078400 7264600 4403400 0 5056300 4399200 5778500 8971100 8727000 5762700 9194600 18019 4814 16403 150947;150948;150949;150950;150951;150952;150953;150954;150955;150956 120155;120156;120157;120158;120159;120160;120161;120162;120163;120164 120158 10 GDGAELIWDK Unmodified 1102.5295 0.52948901 4857 Q9UBT2 UBA2 SUMO-activating enzyme subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 63.062 63.435 2 0.0047747 71672 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.614 52.831 25119000 0 0 0 0 0 0 0 0 0 0 5101000 0 0 6424200 13593000 18020 4857 16404 150957;150958;150959 120165;120166;120167 120165 3 GDGASTAEEGPQPAPEQEEKPPETPAEVVESAPGAGEAPAEK Unmodified 4139.8931 0.89310108 3657 Q92766 RREB1 Ras-responsive element-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 2 1 1 70.059 70.099 4 1.0618E-06 80742 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 25.048 20.814 66739000 0 0 0 3854100 5387600 6578400 5002800 0 0 8686900 0 12176000 8645100 5858300 10550000 18021 3657 16405 150960;150961;150962;150963;150964;150965;150966;150967;150968;150969 120168;120169;120170;120171;120172;120173 120172 6 GDGESQPQFPAVPLEPLPTTEGTPGLPLQQAEER Unmodified 3584.7635 0.76347129 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 93.994 94.147 3 7.0127E-14 109200 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.438 41.712 20275000 0 0 0 0 0 0 0 0 0 6124000 5025700 0 0 0 9125500 18022 4285 16406 150970;150971;150972 120174;120175 120175 2 GDGEVLEEIVTK Unmodified 1287.6558 0.65581174 2848 Q66PJ3 ARL6IP4 ADP-ribosylation factor-like protein 6-interacting protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 75.278 74.751 2 0.0015191 85624 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.214 55.724 190410000 0 82675000 0 6724200 6696000 7800100 6905900 6811000 8406800 8961000 12694000 15356000 7687800 7216900 12474000 18023 2848 16407 150973;150974;150975;150976;150977;150978;150979;150980;150981;150982;150983;150984;150985;150986 120176;120177;120178;120179;120180;120181;120182;120183;120184;120185;120186;120187;120188 120180 13 GDGIGPTRQPPSQGLGYPK Unmodified 1923.9803 0.9802742 1546 P48634 PRRC2A Protein PRRC2A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 50.794 49.972 3 5.6138E-05 55330 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.167 50.699 226210000 15519000 0 2470800 12553000 0 18387000 15140000 0 18417000 22948000 25821000 30308000 17384000 19026000 28239000 18024 1546 16408 150987;150988;150989;150990;150991;150992;150993;150994;150995;150996;150997;150998 120189;120190;120191;120192;120193;120194;120195;120196;120197;120198;120199;120200;120201;120202;120203 120194 15 GDGISPLREEAAGAEDEK Unmodified 1842.8595 0.85954994 2164 Q08AD1 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 6.25 3.77 1 1 2 2 1 1 55.035 52.495 2;3 0.0037709 76325 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 61.235 15.802 49004000 0 39040000 0 0 0 0 0 0 0 3981900 0 0 5982200 0 0 18025 2164 16409 150999;151000;151001;151002 120204;120205;120206 120205 3 GDGPHGSCAFQK Unmodified 1259.5353 0.53531945 4330 Q9H0J9 PARP12 Poly [ADP-ribose] polymerase 12 yes yes 0 0 0 By MS/MS 3 0 1 1 16.312 12.721 3 0.014257 16141 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 39.58 32.013 5358300 0 5358300 0 0 0 0 0 0 0 0 0 0 0 0 0 18026 4330 16410 151003 120207;120208 120208 2 GDGPICLVLAPTR Unmodified 1367.7231 0.72312022 1062;3670 P17844;Q92841 DDX5;DDX17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.748 81.81 2 0.017318 94224 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 47.288 42.837 169880000 0 0 0 5239700 7186200 8800200 4963200 7779000 12174000 12744000 17834000 38140000 21104000 14559000 19360000 18027 1062;3670 16411 151004;151005;151006;151007;151008;151009;151010;151011;151012;151013;151014;151015 120209;120210;120211;120212 120210 2 GDGPVQGIINFEQK Unmodified 1500.7573 0.75725712 725 P00441 SOD1 Superoxide dismutase [Cu-Zn] yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.53 3.89 13 3 20 6 8 2 2 2 1 2 1 1 2 2 2 1 2 2 78.589 76.869 2;3 1.0449E-30 94804 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 189.41 162.97 11326000000 328450000 9405800000 177370000 27700000 14012000 12050000 14963000 17427000 7906100 29805000 211640000 210740000 18753000 146410000 702850000 18028 725 16412 151016;151017;151018;151019;151020;151021;151022;151023;151024;151025;151026;151027;151028;151029;151030;151031;151032;151033;151034;151035;151036;151037;151038;151039;151040;151041;151042;151043;151044;151045;151046;151047;151048;151049;151050;151051 120213;120214;120215;120216;120217;120218;120219;120220;120221;120222;120223;120224;120225;120226;120227;120228;120229;120230;120231;120232;120233;120234;120235;120236;120237;120238;120239;120240;120241;120242;120243;120244 120216 26 GDGQFFAVSVVCPETGAR Unmodified 1895.8836 0.88359662 624 O95163 IKBKAP Elongator complex protein 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 82.255 82.436 2 0.00069484 95054 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 51.218 37.555 2110700 0 0 0 0 0 0 0 0 2110700 0 0 0 0 0 0 18029 624 16413 151052;151053 120245;120246 120246 2 GDGVTPPAGTAAPAPPPLSQDVPGR Unmodified 2324.1761 0.17607347 3912 Q96KQ7 EHMT2 Histone-lysine N-methyltransferase EHMT2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.625 74.688 3 0.00024482 85853 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.193 25.832 156180000 0 0 0 10159000 10635000 11384000 12341000 10211000 10251000 16429000 15571000 18085000 13066000 12958000 15095000 18030 3912 16414 151054;151055;151056;151057;151058;151059;151060;151061;151062;151063;151064;151065 120247;120248;120249;120250;120251;120252;120253;120254;120255;120256 120250 10 GDGVTPPAGTAAPAPPPLSQDVPGRADTSQPSAR Unmodified 3237.6014 0.60143176 3912 Q96KQ7 EHMT2 Histone-lysine N-methyltransferase EHMT2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 70.81 70.875 3 2.7958E-13 81517 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 39.477 37.112 63939000 0 0 0 4424300 5047300 5790800 4501100 3837100 3779800 8045200 5268700 7872500 0 7961300 7410400 18031 3912 16415 151066;151067;151068;151069;151070;151071;151072;151073;151074;151075;151076 120257;120258;120259;120260;120261;120262;120263;120264;120265;120266;120267 120265 11 GDGVVLVAPPLR Unmodified 1191.6976 0.69755739 1891 P62310 LSM3 U6 snRNA-associated Sm-like protein LSm3 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 77.441 77.448 2 0.0059278 88529 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 65.305 53.794 42106000 0 0 0 3163700 3190500 3328300 3053900 0 0 3560600 7229200 8028700 5234400 5316900 0 18032 1891 16416 151077;151078;151079;151080;151081;151082;151083;151084;151085 120268;120269;120270;120271;120272 120270 5 GDHAGVLK Unmodified 795.4239 0.42390173 2626 Q16658 FSCN1 Fascin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.1 0.539 1 7 2 4 3 3 19.806 17.514 1;2 0.0024282 11337 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 120.62 70.596 5503500000 1873900000 1982100000 1647400000 0 0 0 0 0 0 0 0 0 0 0 0 18033 2626 16417 151086;151087;151088;151089;151090;151091;151092;151093;151094;151095 120273;120274;120275;120276;120277;120278;120279;120280;120281;120282;120283;120284 120279 10 GDHPIMMGFEPLVNQR 2 Oxidation (M) 1871.8658 0.86583806 2831 Q5VZE5 NAA35 N-alpha-acetyltransferase 35, NatC auxiliary subunit yes yes 0 2 0 By matching By MS/MS 10 0 2 1 1 62.086 62.319 3 3.2926E-08 70983 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 87.519 83.616 34792000 0 0 0 0 0 2698800 0 0 0 0 0 32094000 0 0 0 18034 2831 16418 151096;151097 120285 120285 4483;4484 1 GDHSPVTRAAAACLDK Unmodified 1667.805 0.80495237 4387 Q9H3U1 UNC45A Protein unc-45 homolog A yes yes 0 0 1 By MS/MS 2 0 1 1 40.565 33.884 3 0.027757 47000 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 39.982 20.143 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18035 4387 16419 151098 120286 120286 1 GDHVIGIVTAK Unmodified 1108.6241 0.6240581 4575 Q9NQT5 EXOSC3 Exosome complex component RRP40 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 44.046 42.626 2 0.00039155 60776 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.79 89.348 61816000 27251000 0 11359000 0 0 2607800 0 0 2278500 0 0 5054200 0 3118100 10148000 18036 4575 16420 151099;151100;151101;151102;151103;151104;151105 120287;120288;120289;120290;120291 120289 5 GDIAECSPAVCMDPGLSNCTIHIVTVTINGDDAENARPK Oxidation (M) 4212.9184 0.91842686 4970 Q9UKK9 NUDT5 ADP-sugar pyrophosphatase yes yes 0 1 1 By MS/MS 2 0 1 1 88.894 80.763 4 9.8749E-19 105080 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.832 56.394 12682000 12682000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18037 4970 16421 151106 120292 120292 6314 1 GDIAECSPAVCMDPGLSNCTIHIVTVTINGDDAENARPK Unmodified 4196.9235 0.92351224 4970 Q9UKK9 NUDT5 ADP-sugar pyrophosphatase yes yes 0 0 1 By MS/MS 2 0 1 1 92.722 84.592 4 3.4165E-51 109677 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.005 85.567 20556000 20556000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18038 4970 16421 151107 120293;120294 120294 2 GDIAHIYDIQTGNK Unmodified 1543.7631 0.76307078 5192 Q9Y4B6 VPRBP Protein VPRBP yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 58.061 57.33 3 0.00015202 74656 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.857 62.417 96287000 0 27563000 6091700 0 0 6724600 0 0 3730200 5647100 9224200 10402000 5919400 6563200 14423000 18039 5192 16422 151108;151109;151110;151111;151112;151113;151114;151115;151116;151117 120295;120296;120297;120298 120295 3 GDIDHVK Unmodified 782.39227 0.39226725 1464 P42704 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 7.8616 4.4803 2 0.040529 7221 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.462 47.491 126910000 6790200 120120000 0 0 0 0 0 0 0 0 0 0 0 0 0 18040 1464 16423 151118;151119 120299 120299 1 GDIFLVR Unmodified 818.46504 0.46503826 1755 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.754 65.84 2 0.023392 74722 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 87.582 22.319 586010000 0 0 0 34652000 18487000 32415000 27818000 52087000 19108000 32855000 77935000 70099000 40405000 58336000 121810000 18041 1755 16424 151120;151121;151122;151123;151124;151125;151126;151127;151128;151129;151130;151131 120300;120301;120302 120302 3 GDIFNQVVPR Unmodified 1143.6037 0.60365701 3808 Q96EB6 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 71.823 71.99 2 0.01255 83182 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 61.999 46.618 20044000 0 0 0 0 0 2316400 1534200 0 0 2271100 2814700 0 2649600 2913800 5543700 18042 3808 16425 151132;151133;151134;151135;151136;151137;151138 120303;120304;120305 120305 3 GDIIQLQR Unmodified 941.52943 0.52942943 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 49.983 50.126 2 0.040979 55595 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.127 13.106 102110000 0 0 0 8055900 0 0 9507500 13164000 0 14606000 0 0 10919000 14004000 31851000 18043 848 16426 151139;151140;151141;151142;151143;151144;151145 120306;120307 120306 2 GDILLDENCCVESLPDK Unmodified 1975.8867 0.88669267 4890 Q9UH65 SWAP70 Switch-associated protein 70 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 78.993 74.939 2 6.2959E-19 93379 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.67 106.69 59722000 0 59722000 0 0 0 0 0 0 0 0 0 0 0 0 0 18044 4890 16427 151146;151147 120308;120309 120309 2 GDILTLLNSTNK Unmodified 1287.7034 0.70343063 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 87.583 83.931 2 9.4629E-13 104481 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.03 79.611 34365000 0 31719000 2646100 0 0 0 0 0 0 0 0 0 0 0 0 18045 2344 16428 151148;151149 120310 120310 1 GDILVVATGQPEMVK Unmodified 1555.828 0.82797922 953 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 77.74 77.081 2 1.0871E-07 88269 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 90.653 77.3 286770000 0 147230000 4543000 2602100 4359900 13730000 5622600 6600800 12370000 11271000 11738000 12759000 5979600 11434000 36524000 18046 953 16429 151150;151151;151152;151153;151154;151155;151156;151157;151158;151159;151160;151161;151162;151163;151164 120311;120312;120313;120314;120315;120316;120317;120318;120319;120320;120321;120322;120323;120324;120325;120326;120327 120323 17 GDILVVATGQPEMVK Oxidation (M) 1571.8229 0.82289384 953 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 70.458 69.208 2 1.1528E-07 79720 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 90.146 75.455 264600000 9356200 122920000 4554500 0 7195700 20294000 10228000 7227900 15790000 10112000 10524000 14599000 8236100 8490600 15077000 18047 953 16429 151165;151166;151167;151168;151169;151170;151171;151172;151173;151174;151175;151176;151177;151178;151179 120328;120329;120330;120331;120332;120333;120334;120335;120336;120337;120338;120339;120340 120335 1229 6 GDINIEGPSMNIEGPDLNVEGPEGGLK Oxidation (M) 2766.3018 0.30180385 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.22 2.2 1 8 1 1 1 1 1 1 1 1 1 82.177 81.893 3 1.3457E-50 95161 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 101.47 94.968 72748000 0 18280000 0 0 3508100 5025700 0 4160500 4351000 11608000 10322000 8767500 0 6724600 0 18048 2172 16430 151180;151181;151182;151183;151184;151185;151186;151187;151188 120341;120342;120343;120344;120345;120346;120347;120348;120349;120350 120349 3500 10 GDINIEGPSMNIEGPDLNVEGPEGGLK Unmodified 2750.3069 0.30688923 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 89.427 85.108 2;3 7.7759E-174 105702 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 193.19 181.91 102360000 0 102360000 0 0 0 0 0 0 0 0 0 0 0 0 0 18049 2172 16430 151189;151190;151191 120351;120352;120353;120354;120355 120352 5 GDINILLIGDPSVAK Unmodified 1523.8559 0.85590853 1183 P25205 MCM3 DNA replication licensing factor MCM3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 88.071 88.197 2 0.0013307 101987 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.451 60.018 36926000 0 0 0 0 0 2757200 1724500 0 0 5693000 4040800 3008400 1720800 4560100 13421000 18050 1183 16431 151192;151193;151194;151195;151196;151197;151198;151199 120356;120357;120358;120359;120360;120361;120362 120358 6 GDISISGPK Unmodified 872.46035 0.46034682 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 1 2 1 33.096 33.29 2 0.0056856 35673 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 77.072 23.392 417560000 0 0 0 22940000 19847000 25609000 26437000 31451000 24515000 30587000 36798000 54274000 47882000 35237000 61986000 18051 2172 16432 151200;151201;151202;151203;151204;151205;151206;151207;151208;151209;151210;151211;151212 120363;120364;120365;120366;120367;120368;120369;120370;120371;120372;120373;120374;120375 120373 11 GDITPLMAAANGGHVK Unmodified 1550.7875 0.78751139 472 O75179 ANKRD17 Ankyrin repeat domain-containing protein 17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 69.475 63.525 3 0.0001384 84633 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.599 40.434 58895000 12576000 38906000 7413000 0 0 0 0 0 0 0 0 0 0 0 0 18052 472 16433 151213;151214;151215 120376;120377;120378 120377 3 GDITPLMAASSGGYLDIVK Oxidation (M) 1922.9659 0.96592926 3250 Q8IWZ3 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 87.178 86.809 2 2.287E-07 100831 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 77.776 64.113 69990000 0 22204000 0 0 0 3303500 0 3874100 3854900 7468400 6068100 6783800 3930700 4990000 7512800 18053 3250 16434 151216;151217;151218;151219;151220;151221;151222;151223;151224;151225;151226 120379;120380;120381;120382;120383;120384;120385;120386;120387;120388;120389;120390;120391 120390 4859 13 GDITPLMAASSGGYLDIVK Unmodified 1906.971 0.97101464 3250 Q8IWZ3 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 95.708 90.843 2 5.4443E-13 112578 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.96 97.323 70585000 0 70585000 0 0 0 0 0 0 0 0 0 0 0 0 0 18054 3250 16434 151227 120392 120392 1 GDIVFNIYHSK Unmodified 1291.6561 0.65608651 3609 Q92503 SEC14L1 SEC14-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.53 1.88 1 16 1 2 1 2 2 2 2 2 1 2 66.998 66.642 2;3 0.0077995 75958 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 53.124 39.121 105680000 5195000 0 0 0 5523100 8310600 7355600 9579600 12156000 14924000 11251000 0 0 3706100 27682000 18055 3609 16435 151228;151229;151230;151231;151232;151233;151234;151235;151236;151237;151238;151239;151240;151241;151242;151243;151244 120393;120394;120395;120396;120397;120398 120394 6 GDKEEVAYEERACEGGK Unmodified 1925.8425 0.84251967 4610 Q9NRV9 HEBP1 Heme-binding protein 1 yes yes 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 28.397 24.059 3 0.0010041 30804 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 75.463 70.461 49165000 17247000 0 31918000 0 0 0 0 0 0 0 0 0 0 0 0 18056 4610 16436 151245;151246 120399;120400 120400 2 GDLAPLWK Unmodified 898.49125 0.49125301 3683 Q92900 UPF1 Regulator of nonsense transcripts 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 69.966 69.42 2 0.022875 79732 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 60.799 31.933 129870000 0 68438000 0 0 0 5031500 3554600 3507600 3610600 5254500 7314400 6080300 5931100 6021600 15130000 18057 3683 16437 151247;151248;151249;151250;151251;151252;151253;151254;151255;151256;151257;151258 120401;120402;120403;120404;120405;120406 120406 6 GDLDASVPSMK Unmodified 1118.5278 0.52777445 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS 2 0 1 1 54.614 48.808 2 0.044316 63211 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 63.734 36.733 40269000 0 40269000 0 0 0 0 0 0 0 0 0 0 0 0 0 18058 2172 16438 151259 120407 120407 0 GDLDASVPSMK Oxidation (M) 1134.5227 0.52268908 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 2 1 1 2 1 1 1 32.849 33.161 2 0.0064957 36338 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 50.108 22.804 69934000 0 0 0 0 4364000 0 12196000 4206300 0 0 5632800 18146000 11050000 4830000 9510100 18059 2172 16438 151260;151261;151262;151263;151264;151265;151266;151267;151268;151269 120408;120409 120408 3501 2 GDLDFTYVTSR Unmodified 1272.5986 0.59863121 452 O75061 DNAJC6 Putative tyrosine-protein phosphatase auxilin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 71.283 71.408 2 0.0036946 82073 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 63.283 53.018 24367000 0 0 0 1785700 0 0 0 0 1834000 3612000 3525800 3176700 2547400 2106000 5779800 18060 452 16439 151270;151271;151272;151273;151274;151275;151276;151277;151278;151279 120410;120411;120412;120413;120414;120415;120416;120417;120418 120414 9 GDLDIAGPNLEGDFK Unmodified 1559.7468 0.74675201 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 79.93 79.621 2 1.7933E-22 97642 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 148.18 118.44 500400000 0 234450000 0 7464400 13725000 17246000 13358000 23504000 17490000 21476000 20837000 39229000 22397000 23749000 45477000 18061 2172 16440 151280;151281;151282;151283;151284;151285;151286;151287;151288;151289;151290;151291;151292 120419;120420;120421;120422;120423;120424;120425;120426;120427;120428;120429;120430;120431;120432 120422 13 GDLDISYITSR Unmodified 1238.6143 0.61428128 234 O14976 GAK Cyclin-G-associated kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.628 73.694 2 0.0022274 84865 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 84.054 77.159 195310000 0 0 0 7266800 15091000 17001000 13576000 13727000 16012000 17166000 18389000 22883000 17303000 13851000 23041000 18062 234 16441 151293;151294;151295;151296;151297;151298;151299;151300;151301;151302;151303;151304 120433;120434;120435;120436;120437;120438;120439;120440;120441 120440 9 GDLDLELVLLCK Unmodified 1386.7429 0.74285261 2207 Q12906 ILF3 Interleukin enhancer-binding factor 3 yes yes 0 0 0 By MS/MS By matching 2.33 0.471 2 1 2 1 96.954 91.484 2 4.1124E-07 115157 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 117.71 106.35 82566000 69997000 12568000 0 0 0 0 0 0 0 0 0 0 0 0 0 18063 2207 16442 151305;151306;151307 120442;120443;120444 120444 3 GDLEEYGQDLLHTVFK Unmodified 1862.905 0.90504357 1481 P43490 NAMPT Nicotinamide phosphoribosyltransferase yes yes 0 0 0 By MS/MS By MS/MS By matching 2.33 0.471 4 2 2 3 1 98.48 94.004 2;3 2.5752E-05 116698 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.151 65.095 58291000 13866000 42850000 1574700 0 0 0 0 0 0 0 0 0 0 0 0 18064 1481 16443 151308;151309;151310;151311;151312;151313 120445;120446;120447;120448 120445 3 GDLETLQPGDDVEFTIK Unmodified 1875.9102 0.91018852 517 O75534 CSDE1 Cold shock domain-containing protein E1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.77 5 2 11 1 5 1 1 1 1 1 1 1 1 1 1 1 1 83.574 81.892 2;3 6.667E-10 95366 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 117.2 101.31 2098200000 8333300 1965200000 14128000 0 2918600 7562200 3276800 4576900 4956200 10786000 13728000 16876000 3261600 8471100 34099000 18065 517 16444 151314;151315;151316;151317;151318;151319;151320;151321;151322;151323;151324;151325;151326;151327;151328;151329;151330;151331 120449;120450;120451;120452;120453;120454;120455;120456;120457;120458;120459;120460;120461;120462 120461 12 GDLGIEIPAEK Unmodified 1140.6027 0.60265396 1000 P14618;P30613 PKM;PKLR Pyruvate kinase PKM;Pyruvate kinase PKLR yes no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69.087 68.63 2 5.074E-05 78431 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 135.55 87.125 7697500000 372550 16023000 3832100 397370000 357470000 458560000 571970000 531730000 429760000 525550000 999410000 1043100000 170570000 646250000 1545500000 18066 1000 16445 151332;151333;151334;151335;151336;151337;151338;151339;151340;151341;151342;151343;151344;151345;151346 120463;120464;120465;120466;120467;120468;120469;120470;120471;120472;120473;120474;120475;120476;120477;120478;120479;120480;120481;120482;120483;120484;120485;120486;120487;120488 120471 25 GDLLEGANAYHCEK Unmodified 1575.6988 0.69875596 3701;164 O00507;Q93008 USP9Y;USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-Y;Probable ubiquitin carboxyl-terminal hydrolase FAF-X no no 0 0 0 By MS/MS By MS/MS 2.2 0.4 4 1 3 2 49.626 44.788 2;3 0.0045246 58327 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 51.009 51.009 68757000 0 59475000 9282600 0 0 0 0 0 0 0 0 0 0 0 0 18067 164;3701 16446 151347;151348;151349;151350;151351 120489;120490;120491;120492;120493;120494 120489 5 GDLLEVK Unmodified 772.43307 0.43306943 2465 Q14CX7 NAA25 N-alpha-acetyltransferase 25, NatB auxiliary subunit yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 7 1 1 1 1 1 1 1 43.661 43.839 2 0.050331 49405 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 62.717 14.802 734810000 0 0 0 0 3015300 0 212280000 221330000 251920000 14880000 13342000 18040000 0 0 0 18068 2465 16447 151352;151353;151354;151355;151356;151357;151358 120495 120495 1 GDLPFVVPR Unmodified 998.55492 0.5549159 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.205 78.265 2 0.021923 89739 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 51.854 40.981 839190000 0 0 0 48055000 51042000 73099000 50829000 47754000 51958000 84285000 84156000 125180000 69217000 66750000 86871000 18069 1356 16448 151359;151360;151361;151362;151363;151364;151365;151366;151367;151368;151369;151370 120496;120497;120498;120499;120500;120501;120502;120503 120501 4 GDLPQVEITK Unmodified 1098.5921 0.59208927 2819 Q5VV41 ARHGEF16 Rho guanine nucleotide exchange factor 16 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 62.034 56.696 2 0.034202 72851 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.645 54.427 93034000 0 93034000 0 0 0 0 0 0 0 0 0 0 0 0 0 18070 2819 16449 151371;151372 120504 120504 0 GDLPREPLVATNLPGR Unmodified 1703.9319 0.93186744 1446 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.63 69.705 3 0.00033445 79925 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 62.813 55.756 1726200000 0 0 0 75064000 88177000 149100000 115730000 145820000 120620000 161610000 170050000 197120000 123990000 149170000 229780000 18071 1446 16450 151373;151374;151375;151376;151377;151378;151379;151380;151381;151382;151383;151384 120505;120506;120507;120508;120509;120510;120511;120512;120513;120514;120515;120516 120505 12 GDLPREPLVATNLPGRGQLQK Unmodified 2258.2495 0.24951318 1446 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 0 0 2 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 2 1 1 2 2 2 2 2 2 2 67.742 67.923 3;4 9.8254E-62 77145 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 145.48 132.3 546290000 0 0 0 0 3030300 62427000 15173000 17801000 59373000 64086000 54894000 69304000 43773000 45507000 110920000 18072 1446 16451 151385;151386;151387;151388;151389;151390;151391;151392;151393;151394;151395;151396;151397;151398;151399;151400;151401;151402;151403 120517;120518;120519;120520;120521;120522;120523;120524;120525;120526;120527;120528;120529 120522 7 GDLQSTLLEGHGTAPPDLDLSAINDK Unmodified 2676.3243 0.32425385 4135 Q9BT25 HAUS8 HAUS augmin-like complex subunit 8 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 88.564 85.05 3 7.0935E-07 101622 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 55.662 49.205 45290000 0 43570000 1720600 0 0 0 0 0 0 0 0 0 0 0 0 18073 4135 16452 151404;151405;151406 120530;120531;120532;120533 120532 4 GDLSPAELMMLTIGDVIK Unmodified 1901.9842 0.98422187 4477 Q9H9T3 ELP3 Elongator complex protein 3 yes yes 0 0 0 By MS/MS 2 0 1 1 105.62 100.86 2 0.00011189 124543 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.362 67.331 2433100 0 2433100 0 0 0 0 0 0 0 0 0 0 0 0 0 18074 4477 16453 151407 120534 120534 1 GDLSTALEVAIDCYEK Unmodified 1782.8346 0.83458074 1464 P42704 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 96.311 88.18 2 0.01459 113966 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.576 38.913 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18075 1464 16454 151408 120535 120535 1 GDLTPLDSLIDFK Unmodified 1432.745 0.7449611 3954 Q96QA5 GSDMA Gasdermin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 94.499 94.58 2 0.030632 109947 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 34.721 24.197 5767100 0 0 0 775720 0 0 0 964220 0 1732100 1347700 0 0 0 947360 18076 3954 16455 151409;151410;151411;151412;151413 120536 120536 1 GDMDELEK Oxidation (M) 951.38553 0.38552689 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 11.515 11.66 2 0.02831 9803 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.418 20.906 25244000 0 0 0 1460700 1684800 0 2073000 1952600 2117100 3392300 2670600 0 3264900 2427900 4200200 18077 2431 16456 151414;151415;151416;151417;151418;151419;151420;151421;151422;151423 120537;120538 120538 2 GDMDISLPK Unmodified 974.47428 0.47428232 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.521 61.621 2 0.032784 70209 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 47.198 31.316 106410000 0 0 0 4606600 4719800 5325300 7489700 9964100 5264000 7885400 9272600 12906000 10182000 10887000 17904000 18078 2172 16457 151424;151425;151426;151427;151428;151429;151430;151431;151432;151433;151434;151435 120539;120540 120539 2 GDMDISVPK Unmodified 960.45863 0.45863226 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 50.137 50.181 2 0.013227 56526 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 60.118 12.461 121990000 0 0 0 5591100 5581400 37362000 0 14100000 0 0 0 0 12368000 15137000 31852000 18079 2172 16458 151436;151437;151438;151439;151440;151441;151442 120541;120542;120543;120544 120543 4 GDMDVSLPK Oxidation (M) 976.45355 0.45354688 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 35.329 35.514 2 0.010952 39423 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 56.378 10.889 169900000 0 0 0 11120000 9557200 13329000 18465000 14213000 11440000 0 12797000 23135000 21124000 15330000 19396000 18080 2172 16459 151443;151444;151445;151446;151447;151448;151449;151450;151451;151452;151453 120545;120546;120547;120548;120549 120547 3502 5 GDMDVSLPK Unmodified 960.45863 0.45863226 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 51.82 51.461 2 0.0055928 58514 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 77.318 13.11 440840000 0 155430000 0 0 0 28822000 25317000 0 18758000 26804000 23711000 57784000 30920000 0 73290000 18081 2172 16459 151454;151455;151456;151457;151458;151459;151460;151461;151462 120550;120551;120552;120553;120554 120550 4 GDMDVSVPK Oxidation (M) 962.4379 0.43789681 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 2 2 2 1 2 2 1 2 1 2 24.945 25.097 2 0.003336 26506 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 84.743 64.897 412650000 0 0 0 26463000 30680000 34702000 46388000 27828000 36854000 41076000 25151000 53605000 37654000 52252000 0 18082 2172 16460 151463;151464;151465;151466;151467;151468;151469;151470;151471;151472;151473;151474;151475;151476;151477;151478;151479;151480 120555;120556;120557;120558;120559;120560;120561;120562;120563;120564 120557 3503 6 GDMDVSVPK Unmodified 946.44298 0.44298219 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 40.333 40.481 2 0.0080109 45110 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 70.856 59.983 399890000 0 0 0 25426000 29750000 34726000 0 47622000 37511000 0 0 70543000 62094000 0 92217000 18083 2172 16460 151481;151482;151483;151484;151485;151486;151487;151488;151489 120565;120566;120567;120568;120569;120570;120571 120568 6 GDMEQNDSDNRR Unmodified 1435.5746 0.57461808 5028 Q9UN86 G3BP2 Ras GTPase-activating protein-binding protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 5.7869 5.9042 3 0.0083026 3605 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 38.021 33.316 44026000 0 0 0 7122100 4571200 5006300 4108500 3273000 3603300 3173600 2612500 2069000 2130000 1755100 4601000 18084 5028 16461 151490;151491;151492;151493;151494;151495;151496;151497;151498;151499;151500;151501 120572;120573;120574;120575 120572 4 GDNITLLQSVSN Unmodified 1259.6357 0.635745 1889 P62304 SNRPE Small nuclear ribonucleoprotein E yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.94 3.58 1 3 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79.036 78.439 2 7.1261E-05 88530 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 108.47 74.284 1824600000 247130000 23774000 3418000 64580000 96212000 95126000 117500000 106480000 80014000 122290000 165930000 186350000 102580000 166840000 246400000 18085 1889 16462 151502;151503;151504;151505;151506;151507;151508;151509;151510;151511;151512;151513;151514;151515;151516;151517 120576;120577;120578;120579;120580;120581;120582;120583;120584;120585;120586;120587;120588;120589;120590 120581 15 GDNIYEWR Unmodified 1051.4723 0.47230849 3921;1677 Q96LR5;Q969T4;P51965 UBE2E2;UBE2E3;UBE2E1 Ubiquitin-conjugating enzyme E2 E2;Ubiquitin-conjugating enzyme E2 E3;Ubiquitin-conjugating enzyme E2 E1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 53.88 53.882 2 0.0082674 60856 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 86.794 69.027 78156000 0 0 0 6984600 6075000 15081000 0 0 0 0 0 0 10954000 15304000 23758000 18086 3921;1677 16463 151518;151519;151520;151521;151522;151523 120591;120592;120593;120594;120595;120596 120591 6 GDNLVNKPDER Unmodified 1255.6157 0.61567826 191 O14593 RFXANK DNA-binding protein RFXANK yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 16.928 17.107 2;3 0.00089188 15861 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 117.52 93.365 308890000 0 0 0 16717000 19000000 22318000 23230000 21734000 18393000 18837000 30930000 43442000 30304000 24764000 39216000 18087 191 16464 151524;151525;151526;151527;151528;151529;151530;151531;151532;151533;151534;151535;151536;151537;151538;151539;151540;151541;151542;151543;151544;151545;151546;151547 120597;120598;120599;120600;120601;120602;120603;120604;120605;120606;120607;120608;120609;120610 120601 10 GDNVPQVNGENTER Unmodified 1527.6914 0.6913624 5050 Q9UPN6 SCAF8 Protein SCAF8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.532 28.727 2 0.00038021 30918 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 95.477 89.505 215540000 0 0 0 12375000 11520000 13236000 15409000 14808000 13300000 19049000 24807000 25618000 17501000 19226000 28688000 18088 5050 16465 151548;151549;151550;151551;151552;151553;151554;151555;151556;151557;151558;151559 120611;120612;120613;120614;120615;120616;120617;120618;120619;120620;120621;120622;120623;120624 120612 14 GDPEGPEAGGAEQK Unmodified 1340.5844 0.58443771 1982 P78411 IRX5 Iroquois-class homeodomain protein IRX-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.606 12.76 2 0.0014045 11922 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 58.676 47.186 31176000 0 0 0 1463000 1493100 3512900 2521100 2255500 2159000 3524000 2765200 2770500 3419500 2239900 3052400 18089 1982 16466 151560;151561;151562;151563;151564;151565;151566;151567;151568;151569;151570;151571 120625;120626;120627;120628 120625 4 GDPEMAPIYLK Unmodified 1232.6111 0.61111015 5004 Q9ULT8 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 70.964 70.124 2 0.0047474 88289 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.934 66.708 141120000 0 126160000 0 0 0 3094400 0 0 0 0 0 0 3223500 3005000 5635900 18090 5004 16467 151572;151573;151574;151575;151576 120629;120630 120629 2 GDPERPEAAGLDQDERSSSDTNESEIK Acetyl (Protein N-term) 2973.3072 0.30715982 3064 Q7LG56 RRM2B Ribonucleoside-diphosphate reductase subunit M2 B yes yes 1 0 2 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 50.985 44.766 3 1.9192E-29 58453 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.001 76.584 44192000 5485700 38706000 0 0 0 0 0 0 0 0 0 0 0 0 0 18091 3064 16468 151577;151578;151579 120631;120632;120633 120631 3 GDPFATLSAR Unmodified 1033.5193 0.51925868 3907 Q96KG9 SCYL1 N-terminal kinase-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 61.452 61.775 2 0.010746 70180 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.461 15.193 15960000 0 0 0 0 0 0 0 0 7164700 0 0 8794900 0 0 0 18092 3907 16469 151580;151581;151582 120634;120635 120635 2 GDPFQNDPFAEQQTTSTDPFGGDPFK Unmodified 2842.2358 0.23583277 4836 Q9UBC2 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 yes yes 0 0 0 By MS/MS 2 0 1 1 94.111 89.215 3 1.0209E-06 110716 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.836 63.297 58987000 0 58987000 0 0 0 0 0 0 0 0 0 0 0 0 0 18093 4836 16470 151583 120636;120637 120636 2 GDPGLGERDWTSK Unmodified 1416.6634 0.66335673 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.467 39.646 3 0.0088293 44169 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 41.621 20.561 269810000 0 0 0 12288000 16314000 20616000 15774000 18067000 19227000 21538000 27098000 27985000 21660000 26645000 42596000 18094 4285 16471 151584;151585;151586;151587;151588;151589;151590;151591;151592;151593;151594;151595 120638;120639;120640;120641;120642;120643;120644;120645 120643 1 GDPITREAMQLK Unmodified 1357.7024 0.70238478 4803 Q9P215 POGK Pogo transposable element with KRAB domain yes yes 0 0 1 By MS/MS 2 0 1 1 58.06 54.234 3 0.048921 67588 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 35.737 26.049 5753300 0 0 5753300 0 0 0 0 0 0 0 0 0 0 0 0 18095 4803 16472 151596 120646 120646 1 GDPLLDQR Unmodified 912.46649 0.46649483 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 35.933 35.995 2 0.025413 40082 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 58.716 41.789 198190000 0 0 0 16302000 19766000 29248000 20795000 22122000 20003000 0 0 40109000 0 29843000 0 18096 528 16473 151597;151598;151599;151600;151601;151602;151603;151604 120647;120648 120648 2 GDPNKPSGFRSVK Unmodified 1387.7208 0.72081203 119 O00151 PDLIM1 PDZ and LIM domain protein 1 yes yes 0 0 2 By MS/MS 2 0 1 1 23.145 18.249 3 0.030461 25950 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.726 44.838 65350000 65350000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18097 119 16474 151605 120649 120649 0 GDPNTEEIR Unmodified 1029.4727 0.47270242 1409 P40222 TXLNA Alpha-taxilin yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 17.002 17.371 2 0.023114 16398 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.193 33.953 15296000 0 0 0 0 0 0 1322800 0 0 0 2379300 3838300 3318300 0 4436900 18098 1409 16475 151606;151607;151608;151609;151610 120650 120650 1 GDPPQLSNSEER Unmodified 1327.6004 0.60042213 1491 P45985 MAP2K4 Dual specificity mitogen-activated protein kinase kinase 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 24.324 24.541 2 0.0097978 25049 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.288 35.44 70771000 0 0 0 7452600 0 11283000 9184600 7538900 10487000 6221000 0 5809300 0 5758200 7035800 18099 1491 16476 151611;151612;151613;151614;151615;151616;151617;151618;151619 120651;120652 120651 2 GDPQVYEELFSYSCPK Unmodified 1917.8455 0.84547978 5084 Q9Y262 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.29 3.65 3 2 9 4 1 1 1 1 1 1 1 1 1 1 86.475 85.131 2;3 9.0859E-08 99037 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 111.79 106.41 543590000 0 487920000 4875300 0 0 3671500 0 2347400 3764700 6071400 5270300 7687900 0 4800800 17184000 18100 5084 16477 151620;151621;151622;151623;151624;151625;151626;151627;151628;151629;151630;151631;151632;151633 120653;120654;120655;120656;120657;120658;120659;120660;120661;120662;120663 120663 10 GDPSNEEAPK Unmodified 1042.4567 0.456718 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.3358 7.465 2 0.010197 5248 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 56.432 44.92 34796000 0 0 0 1642200 1830700 3839700 2960200 3018700 4244900 2419600 4702000 2124000 3011100 2188200 2815000 18101 4139 16478 151634;151635;151636;151637;151638;151639;151640;151641;151642;151643;151644;151645 120664;120665;120666;120667 120664 4 GDPVNVSR Unmodified 842.42463 0.42463001 1146 P22735 TGM1 Protein-glutamine gamma-glutamyltransferase K yes yes 0 0 0 By MS/MS By MS/MS By matching By matching 10 0 4 1 1 1 1 17.658 17.726 2 0.033014 18243 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 53.968 37.041 40714000 0 0 0 22610000 0 4812000 0 5873100 0 0 0 0 7418900 0 0 18102 1146 16479 151646;151647;151648;151649 120668 120668 1 GDQENVHPDVMLVQPR Oxidation (M) 1848.8788 0.87884559 2457 Q14974 KPNB1 Importin subunit beta-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 16 1 1 1 1 1 1 2 2 1 1 2 2 53.677 53.869 2;3 4.1071E-08 61047 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 87.519 81.252 630320000 0 0 0 26620000 35340000 80400000 57300000 40902000 37947000 94821000 80396000 5710200 7622600 74535000 88728000 18103 2457 16480 151650;151651;151652;151653;151654;151655;151656;151657;151658;151659;151660;151661;151662;151663;151664;151665 120669;120670;120671;120672;120673;120674;120675;120676;120677;120678;120679;120680 120669 4041 11 GDQENVHPDVMLVQPR Unmodified 1832.8839 0.88393097 2457 Q14974 KPNB1 Importin subunit beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 1 2 1 1 1 2 2 2 2 2 2 61.337 61.502 2;3 7.2387E-11 71011 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 81.632 71.532 566280000 0 0 0 17436000 19201000 55281000 21969000 38280000 13969000 51904000 64979000 52877000 33963000 49812000 146610000 18104 2457 16480 151666;151667;151668;151669;151670;151671;151672;151673;151674;151675;151676;151677;151678;151679;151680;151681;151682;151683;151684 120681;120682;120683;120684;120685;120686;120687;120688;120689;120690;120691;120692;120693;120694;120695 120694 13 GDQPLYSIPIENILAVEK Unmodified 1998.0674 0.067357869 2420 Q14644 RASA3 Ras GTPase-activating protein 3 yes yes 0 0 0 By MS/MS 2 0 1 1 99.037 94.303 2 0.020761 116673 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 36.96 28.07 16398000 0 16398000 0 0 0 0 0 0 0 0 0 0 0 0 0 18105 2420 16481 151685 120696 120696 1 GDQVLNFSDAEDLIDDSK Unmodified 1979.896 0.89599502 3830 Q96EZ8 MCRS1 Microspherule protein 1 yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 90.806 86.744 2 1.951E-09 107687 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.673 88.263 17825000 0 17825000 0 0 0 0 0 0 0 0 0 0 0 0 0 18106 3830 16482 151686;151687;151688 120697;120698 120697 2 GDQYIVDMANTK Unmodified 1353.6235 0.62346575 4693 Q9NW82 WDR70 WD repeat-containing protein 70 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 2 58.143 57.664 2 1.5123E-09 72836 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 143.96 131.09 269010000 0 159830000 0 6131300 7300400 0 6526500 8350900 0 0 18892000 0 19762000 13933000 28284000 18107 4693 16483 151689;151690;151691;151692;151693;151694;151695;151696;151697;151698;151699;151700;151701 120699;120700;120701;120702;120703;120704;120705;120706;120707;120708;120709;120710;120711 120701 13 GDQYIVDMANTK Oxidation (M) 1369.6184 0.61838038 4693 Q9NW82 WDR70 WD repeat-containing protein 70 yes yes 0 1 0 By MS/MS 2 0 1 1 39.38 34.368 2 0.01251 44980 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 59.367 47.131 8210800 0 8210800 0 0 0 0 0 0 0 0 0 0 0 0 0 18108 4693 16483 151702 120712 120712 6092 1 GDREQLLQR Acetyl (Protein N-term) 1155.5996 0.59963426 2109 Q04917 YWHAH 14-3-3 protein eta yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.545 36.726 2 0.0030202 39378 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 133.98 102.45 498110000 0 0 0 16013000 13525000 36364000 21893000 21450000 14032000 35616000 58934000 64571000 35595000 61624000 118490000 18109 2109 16484 151703;151704;151705;151706;151707;151708;151709;151710;151711;151712;151713;151714 120713;120714;120715;120716;120717;120718;120719;120720;120721;120722;120723;120724 120718 11 GDRGEVDSNGSDGGEASR Unmodified 1763.7307 0.73066103 3061 Q7LBC6 KDM3B Lysine-specific demethylase 3B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 6.9654 7.0847 3 7.7292E-06 5483 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 52.814 46.085 39911000 0 0 0 2037300 1996100 2775600 2481200 4839100 0 3807200 5158100 2481100 5054700 5533000 3748000 18110 3061 16485 151715;151716;151717;151718;151719;151720;151721;151722;151723;151724;151725 120725;120726;120727;120728;120729;120730;120731 120729 7 GDRGEVDSNGSDGGEASRGPWK Unmodified 2231.9792 0.97916458 3061 Q7LBC6 KDM3B Lysine-specific demethylase 3B yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 2 2 1 2 2 2 2 2 27.234 27.605 3;4 7.5503E-07 29095 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 58.366 49.575 151210000 0 0 0 0 0 0 12587000 16297000 0 4055100 20970000 25510000 23277000 23141000 25375000 18111 3061 16486 151726;151727;151728;151729;151730;151731;151732;151733;151734;151735;151736;151737;151738;151739;151740 120732;120733;120734;120735;120736 120736 5 GDRGLPLEGSAK Unmodified 1198.6306 0.63060004 2514 Q15291 RBBP5 Retinoblastoma-binding protein 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.52 3.05 3 1 17 2 2 2 1 1 1 1 2 2 2 1 2 2 32.633 32.049 2;3 0.00014844 40958 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 101.39 62.826 254650000 0 17417000 54098000 13352000 8286200 9337200 10789000 0 9234100 16238000 18492000 42219000 14139000 15377000 25674000 18112 2514 16487 151741;151742;151743;151744;151745;151746;151747;151748;151749;151750;151751;151752;151753;151754;151755;151756;151757;151758;151759;151760;151761 120737;120738;120739;120740;120741;120742;120743;120744;120745 120742 8 GDRSEDFGVNEDLADSDAR Unmodified 2066.8777 0.8777192 773 P04083 ANXA1 Annexin A1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.59 3.05 3 14 1 1 1 1 1 1 2 2 1 1 1 1 1 1 1 55.225 54.278 3 5.3115E-06 61646 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 69.763 63.949 268330000 21071000 18047000 3407600 11250000 4485200 11866000 14230000 27683000 9525300 7288500 17623000 29765000 14227000 13536000 64328000 18113 773 16488 151762;151763;151764;151765;151766;151767;151768;151769;151770;151771;151772;151773;151774;151775;151776;151777;151778 120746;120747;120748;120749;120750;120751;120752;120753;120754;120755;120756;120757;120758;120759;120760;120761;120762;120763;120764;120765 120758 17 GDRSEDFGVNEDLADSDARALYEAGER Unmodified 2956.3071 0.30710024 773 P04083 ANXA1 Annexin A1 yes yes 0 0 2 By MS/MS 2 0 1 1 81.247 73.117 4 4.1668E-29 95826 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.859 74.131 59813000 59813000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18114 773 16489 151779 120766;120767 120767 2 GDRSPEPGQTWTR Unmodified 1485.6961 0.69605384 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 2 2 2 28.037 28.317 2;3 7.7564E-13 29433 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 102.9 89.703 216280000 0 0 0 12474000 6656200 14487000 0 0 0 20857000 24404000 27568000 38978000 24511000 46347000 18115 2172 16490 151780;151781;151782;151783;151784;151785;151786;151787;151788;151789;151790;151791 120768;120769;120770;120771;120772;120773;120774;120775;120776 120770 9 GDRVVECQLETHNRK Unmodified 1839.901 0.90097802 4393 Q9H4A3 WNK1 Serine/threonine-protein kinase WNK1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 2 2 1 2 1 1 2 2 2 2 20.57 20.832 3;4 9.0896E-18 21683 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 106.14 95.285 290100000 0 0 0 9425100 0 34155000 15337000 21993000 25255000 23270000 16552000 36042000 42019000 28146000 37903000 18116 4393 16491 151792;151793;151794;151795;151796;151797;151798;151799;151800;151801;151802;151803;151804;151805;151806;151807;151808;151809 120777;120778;120779;120780;120781;120782;120783;120784;120785;120786;120787;120788;120789;120790 120788 11 GDSDDEYDRR Acetyl (Protein N-term) 1268.4905 0.49053732 4230 Q9BXP5 SRRT Serrate RNA effector molecule homolog yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.812 14.982 2 2.8032E-23 13792 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 173.48 165.25 133340000 0 0 0 7916300 4909600 9512000 8884900 5950700 6384000 11692000 14973000 12101000 13073000 13185000 24760000 18117 4230 16492 151810;151811;151812;151813;151814;151815;151816;151817;151818;151819;151820;151821 120791;120792;120793;120794;120795;120796;120797;120798;120799;120800;120801;120802 120794 12 GDSEAEALSEIK Unmodified 1247.5881 0.5881261 2768 Q5T1M5 FKBP15 FK506-binding protein 15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 53.159 52.742 2 3.0338E-05 66409 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.79 100.02 239950000 0 73963000 0 8168700 7760600 0 10364000 8096200 9085500 16341000 0 32123000 17565000 13865000 42616000 18118 2768 16493 151822;151823;151824;151825;151826;151827;151828;151829;151830;151831;151832;151833 120803;120804;120805;120806;120807;120808;120809;120810;120811;120812 120806 10 GDSGAAPDVDDK Unmodified 1145.4837 0.48366103 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.31 2.4 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 21.361 21.916 2 7.739E-07 92496 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 138.22 130.55 95737000 24663000 0 0 2679200 2628400 4172100 3101300 2679500 2341500 6026100 8535200 6710300 8390900 8895000 14914000 18119 2203 16494 151834;151835;151836;151837;151838;151839;151840;151841;151842;151843;151844;151845;151846 120813;120814;120815;120816;120817;120818 120815 6 GDSGVDTQNSEGNADEEDPLGPNCYYDK Unmodified 3045.2054 0.20539686 3415 Q8ND56 LSM14A Protein LSM14 homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.335 62.43 3 6.6405E-20 71284 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.779 62.556 103360000 0 0 0 5150600 6957800 9741600 8537700 8358000 5807000 8693800 10736000 9040800 7033100 8255200 15046000 18120 3415 16495 151847;151848;151849;151850;151851;151852;151853;151854;151855;151856;151857;151858 120819;120820;120821;120822;120823;120824;120825;120826;120827;120828;120829;120830;120831;120832 120830 14 GDSKKDDEENYLDLFSHK Unmodified 2138.9756 0.97564233 2138 Q07666 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 yes yes 0 0 2 By MS/MS 2 0 2 2 78.379 70.248 3;4 0.0026606 92257 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 30.712 29.322 52255000 52255000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18121 2138 16496 151859;151860 120833;120834 120833 1 GDSLASWDGILDLPEQNTIHK Unmodified 2308.1335 0.13353995 4656 Q9NUY8 TBC1D23 TBC1 domain family member 23 yes yes 0 0 0 By MS/MS 2 0 1 1 95.119 86.989 3 0.0067978 112557 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 30.659 22.372 4820600 4820600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18122 4656 16497 151861 120835 120835 1 GDSLDSVEALIK Unmodified 1245.6452 0.64524705 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.23 3.24 2 1 10 1 2 1 1 1 1 1 1 1 1 1 1 83.099 81.937 2 0.00046083 95268 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 96.342 72.913 504100000 12822000 431310000 0 0 1277000 8380300 1538400 2317400 3274800 6847300 6018300 8482900 2748600 0 19084000 18123 2344 16498 151862;151863;151864;151865;151866;151867;151868;151869;151870;151871;151872;151873;151874 120836;120837;120838;120839;120840;120841;120842;120843;120844;120845 120836 9 GDSNANSDVCAAALR Unmodified 1519.6685 0.66851847 3296 Q8IZL8 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 37.484 37.608 2 6.8052E-06 41572 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 82.171 65.947 31968000 0 0 0 0 1864000 3673600 1459600 0 2659700 3481700 3915400 0 8563400 6350500 0 18124 3296 16499 151875;151876;151877;151878;151879;151880;151881;151882;151883 120846;120847;120848;120849;120850;120851;120852 120851 7 GDSPEARALAK Unmodified 1113.5778 0.57783619 1073 P18206 VCL Vinculin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 21.84 17.98 2 0.001832 23931 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.29 85.569 256690000 16413000 201840000 38437000 0 0 0 0 0 0 0 0 0 0 0 0 18125 1073 16500 151884;151885;151886 120853;120854;120855 120853 0 GDSPLHSIR Unmodified 980.50394 0.50394297 2411 Q14527 HLTF Helicase-like transcription factor yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 25.991 26.303 2 0.0094522 26514 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.692 50.489 94608000 0 0 0 0 0 11943000 10645000 6022500 0 11718000 15710000 23557000 0 0 15013000 18126 2411 16501 151887;151888;151889;151890;151891;151892;151893 120856;120857 120856 2 GDSSGFSSYSGSSSSGSSISSAR Unmodified 2142.8938 0.89376319 2541 Q15517 CDSN Corneodesmosin yes yes 0 0 0 By MS/MS 10 0 1 1 42.611 42.778 2 1.2681E-13 47765 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 97.836 92.557 13037000 0 0 0 0 0 0 0 13037000 0 0 0 0 0 0 0 18127 2541 16502 151894 120858 120858 1 GDSSHVVSEGVPR Unmodified 1324.6371 0.63714198 4649 Q9NUP1 BLOC1S4 Biogenesis of lysosome-related organelles complex 1 subunit 4 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 25.994 26.091 3 0.002888 26584 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 36.631 29.021 63161000 0 0 0 2711300 5655500 2617300 5919500 0 4724100 10859000 15499000 0 8241700 6933400 0 18128 4649 16503 151895;151896;151897;151898;151899;151900;151901;151902;151903 120859;120860;120861;120862;120863;120864 120862 6 GDTALDMRGRCSAGQK Oxidation (M) 1737.7887 0.78865038 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 1 2 By MS/MS 2 0 1 1 14.652 10.603 3 0.0038807 15821 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.279 58.44 12450000 12450000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18129 3676 16504 151904 120865 120865 5213 1 GDTANEIGQVLHFENVK Unmodified 1869.9221 0.92209062 1383 P36952 SERPINB5 Serpin B5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.67 3.86 7 2 12 3 4 2 1 1 1 1 1 1 1 1 1 1 1 1 82.949 80.957 2;3 1.0796E-275 101539 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 312.25 281.37 3751200000 113200000 3179400000 136550000 2210400 3066400 35429000 6760200 14009000 14060000 40289000 25428000 22068000 9158300 18735000 130750000 18130 1383 16505 151905;151906;151907;151908;151909;151910;151911;151912;151913;151914;151915;151916;151917;151918;151919;151920;151921;151922;151923;151924;151925 120866;120867;120868;120869;120870;120871;120872;120873;120874;120875;120876;120877;120878;120879;120880;120881;120882;120883;120884;120885;120886;120887 120871 22 GDTDRLTPEALK Unmodified 1314.6779 0.67794416 3116 Q7Z6K5 ARPIN Arpin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 77.534 77.664 2 0.042159 89787 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 71.451 20.105 50747000 0 0 0 0 0 4587700 3588200 6718400 0 8235600 4995000 8707300 7211000 6703700 0 18131 3116 16506 151926;151927;151928;151929;151930;151931;151932;151933 120888 120888 1 GDTDSRFIPYTEEFSEK Unmodified 2019.9062 0.90616578 5301 Q9Y6Y8 SEC23IP SEC23-interacting protein yes yes 0 0 1 By MS/MS 2 0 1 1 79.181 71.05 3 0.00035509 93399 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.201 49.773 53155000 53155000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18132 5301 16507 151934 120889;120890 120890 2 GDTEQEIQR Unmodified 1074.4942 0.49416614 399 O60437 PPL Periplakin yes yes 0 0 0 By MS/MS 10 0 1 1 13.336 13.199 2 0.0026152 12531 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 138.26 122.06 7136900 0 0 0 7136900 0 0 0 0 0 0 0 0 0 0 0 18133 399 16508 151935 120891 120891 1 GDTFVDCTGADIK Unmodified 1397.6133 0.613295 3427 Q8NEM2 SHCBP1 SHC SH2 domain-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53.308 52.429 2 0.00013271 65487 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.898 90.855 129020000 2855000 43216000 0 3223000 3890100 7367200 3558900 4521200 3755600 5033000 10332000 10986000 6279100 7088900 16915000 18134 3427 16509 151936;151937;151938;151939;151940;151941;151942;151943;151944;151945;151946;151947;151948;151949 120892;120893;120894;120895;120896;120897;120898;120899;120900;120901;120902;120903 120895 11 GDTPGHATPGHGGATSSAR Unmodified 1732.7877 0.7877224 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 1 2 2 2 2 2 2 2 2 2 2 2 6.8423 6.9768 3;4 3.0474E-74 3877 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 133.93 122.66 211050000 0 0 0 4647200 9521900 13225000 10843000 10116000 11584000 16088000 32813000 19725000 23773000 22114000 36603000 18135 516 16510 151950;151951;151952;151953;151954;151955;151956;151957;151958;151959;151960;151961;151962;151963;151964;151965;151966;151967;151968;151969;151970;151971;151972 120904;120905;120906;120907;120908;120909;120910;120911;120912;120913;120914;120915;120916;120917 120912 12 GDTPGHATPGHGGATSSARK Unmodified 1860.8827 0.88268542 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 1 By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 5.9631 6.0748 4 0.00038626 4162 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 38.878 33.876 48230000 0 0 0 1607700 2195100 2400600 1795600 3079500 1974900 0 4892200 9242000 5028200 6221800 9792500 18136 516 16511 151973;151974;151975;151976;151977;151978;151979;151980;151981;151982;151983 120918;120919;120920;120921;120922 120921 5 GDTSEDASIHRLEGTDLDCQVGGLICK Acetyl (Protein N-term) 2987.3601 0.36006378 3642 Q92620 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 yes yes 1 0 1 By MS/MS 2 0 1 1 84.728 79.985 3 1.4082E-34 99435 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.766 87.862 31799000 0 31799000 0 0 0 0 0 0 0 0 0 0 0 0 0 18137 3642 16512 151984 120923 120923 1 GDTSGDYK Unmodified 841.34538 0.34537664 873 P08758 ANXA5 Annexin A5 yes yes 0 0 0 By MS/MS 1 0 1 1 106.78 112.04 2 0.012174 92785 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 104.37 86.231 66105000 66105000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18138 873 16513 151985 120924 120924 1 GDTSSGPHSRETLSTSDCLASK Unmodified 2292.0288 0.028816886 3037 Q76L83 ASXL2 Putative Polycomb group protein ASXL2 yes yes 0 0 1 By MS/MS 2 0 1 1 33.758 30.452 3 0.043171 38517 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 21.865 13.264 2473000 0 0 2473000 0 0 0 0 0 0 0 0 0 0 0 0 18139 3037 16514 151986 120925 120925 1 GDVAEGDLIEHFSQFGTVEK Unmodified 2177.0277 0.027677899 2243 Q13151 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.5 2.93 4 1 1 1 3 1 1 89.564 84.85 2;3 1.402E-198 106500 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 236.31 213.22 585130000 111140000 452710000 21275000 0 0 0 0 0 0 0 0 0 0 0 0 18140 2243 16515 151987;151988;151989;151990;151991;151992 120926;120927;120928;120929;120930;120931 120927 6 GDVAVVRINSPNSK Unmodified 1454.7841 0.78414057 1426 P40939 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 46.733 40.926 3 0.023006 56957 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 33.265 19.852 24866000 19596000 0 5270000 0 0 0 0 0 0 0 0 0 0 0 0 18141 1426 16516 151993;151994 120932;120933 120933 2 GDVDVSAPK Unmodified 886.43961 0.43961137 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 22.201 22.381 2 0.0055928 23409 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 77.318 7.69 290050000 0 0 0 14351000 15007000 20817000 21818000 26343000 25365000 0 0 42059000 46669000 33070000 44550000 18142 2172 16517 151995;151996;151997;151998;151999;152000;152001;152002;152003;152004 120934;120935 120934 2 GDVDVSLPEVEGEMK Oxidation (M) 1618.7396 0.73961772 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 68.714 68.267 2 3.7714E-10 78361 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 95.477 85.245 114590000 0 16728000 0 6963000 0 9270300 0 8641000 11134000 11160000 10424000 14732000 13208000 0 12333000 18143 2172 16518 152005;152006;152007;152008;152009;152010;152011;152012;152013;152014 120936;120937;120938;120939;120940;120941;120942;120943;120944 120944 3504 9 GDVDVSLPEVEGEMK Unmodified 1602.7447 0.7447031 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 77.358 77.052 2 9.9662E-05 88370 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 85.973 72.62 173130000 0 53442000 0 2609400 5167100 6727800 5953800 11479000 7032800 11009000 10248000 10262000 10783000 13100000 25312000 18144 2172 16518 152015;152016;152017;152018;152019;152020;152021;152022;152023;152024;152025;152026;152027 120945;120946;120947;120948;120949;120950;120951;120952;120953;120954;120955;120956;120957;120958 120954 14 GDVDVSLPK Unmodified 928.48656 0.48656157 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.53 2.94 1 2 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 49.47 48.525 2 0.0041698 54085 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.696 63.494 3709700000 1253400 781030000 0 178050000 162910000 190570000 208910000 260270000 198380000 210630000 241910000 293020000 313360000 321780000 347600000 18145 2172 16519 152028;152029;152030;152031;152032;152033;152034;152035;152036;152037;152038;152039;152040;152041;152042 120959;120960;120961;120962;120963;120964;120965;120966 120961 8 GDVDVSVPEVEGK Unmodified 1328.646 0.64597533 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 57.648 57.658 2 0.0015698 65515 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 80.014 72.365 229750000 0 0 0 17438000 16794000 17601000 20617000 27533000 0 29089000 26463000 0 44452000 29762000 0 18146 2172 16520 152043;152044;152045;152046;152047;152048;152049;152050;152051 120967;120968;120969;120970;120971;120972;120973;120974;120975 120967 8 GDVDVSVPK Unmodified 914.47091 0.4709115 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.476 37.656 2 0.0077155 41902 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 71.692 50.164 727550000 0 0 0 42801000 37656000 45751000 59254000 74076000 48388000 46242000 59488000 74504000 104020000 65161000 70199000 18147 2172 16521 152052;152053;152054;152055;152056;152057;152058;152059;152060;152061;152062;152063 120976;120977;120978;120979;120980;120981 120978 6 GDVDVTGPK Unmodified 886.43961 0.43961137 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 19.187 19.303 2 0.0099839 19597 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 65.156 6.7302 179240000 0 0 0 10995000 15246000 13352000 22912000 24321000 17719000 17809000 16287000 0 23276000 17323000 0 18148 2172 16522 152064;152065;152066;152067;152068;152069;152070;152071;152072;152073 120982;120983;120984;120985 120982 4 GDVDVTLPK Unmodified 942.50221 0.50221163 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 49.744 49.828 2 0.009002 56159 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 67.993 8.7475 214200000 0 0 0 14355000 16111000 15296000 27566000 0 19894000 18446000 26286000 0 28796000 0 47448000 18149 2172 16523 152074;152075;152076;152077;152078;152079;152080;152081;152082;152083 120986;120987;120988;120989;120990 120988 5 GDVEEDEAVPDSEQDIK Unmodified 1873.8065 0.80651131 215 O14787 TNPO2 Transportin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 9.31 2.4 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 51.143 51.702 2 8.2915E-26 52281 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 110.92 102.19 87022000 15544000 0 0 3929000 2905900 10571000 4762600 3109500 3444800 7122200 6588700 7667500 5513000 5377800 10486000 18150 215 16524 152084;152085;152086;152087;152088;152089;152090;152091;152092;152093;152094;152095;152096 120991;120992;120993;120994;120995;120996;120997;120998;120999;121000 120999 10 GDVEEDETIPDSEQDIRPR Unmodified 2198.9927 0.99274896 3692 Q92973 TNPO1 Transportin-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.18 3.29 3 1 13 1 2 1 1 1 2 1 1 1 1 1 1 1 1 1 54.356 53.205 2;3 1.3112E-46 61080 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 125.12 121.93 907620000 15414000 28827000 0 61330000 45639000 86061000 56201000 61323000 41220000 76445000 78883000 107040000 61933000 66770000 120530000 18151 3692 16525 152097;152098;152099;152100;152101;152102;152103;152104;152105;152106;152107;152108;152109;152110;152111;152112;152113 121001;121002;121003;121004;121005;121006;121007;121008;121009;121010;121011;121012;121013;121014;121015;121016;121017;121018;121019;121020;121021;121022;121023;121024;121025;121026;121027;121028 121022 28 GDVENIEVVQK Unmodified 1228.6299 0.62993134 1464 P42704 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 44.649 44.744 2 0.0084329 49217 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.528 35.562 46135000 0 0 0 8352600 6685200 8439600 0 0 0 0 0 9351400 0 0 13306000 18152 1464 16526 152114;152115;152116;152117;152118 121029;121030;121031;121032;121033 121030 5 GDVETFPIPK Unmodified 1101.5706 0.57062555 455 O75116 ROCK2 Rho-associated protein kinase 2 yes yes 0 0 0 By MS/MS 2 0 1 1 73.034 67.489 2 0.016255 85325 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.507 50.268 30381000 0 30381000 0 0 0 0 0 0 0 0 0 0 0 0 0 18153 455 16527 152119 121034 121034 1 GDVGLGLVK Unmodified 856.50182 0.5018177 3039 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 56.568 55.4 2 0.027634 61402 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.325 29.403 1824000000 57115000 1323100000 48511000 0 0 47507000 22974000 22186000 14843000 40826000 45266000 47621000 25573000 37011000 91530000 18154 3039 16528 152120;152121;152122;152123;152124;152125;152126;152127;152128;152129;152130;152131;152132 121035;121036;121037 121036 3 GDVGLVAENSR Unmodified 1115.5571 0.55710075 1081 P18858 LIG1 DNA ligase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 32.888 32.568 2 0.0022092 34494 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.76 39.678 192280000 0 10467000 0 16502000 13971000 25944000 16238000 0 10426000 21610000 20068000 0 14831000 15721000 26498000 18155 1081 16529 152133;152134;152135;152136;152137;152138;152139;152140;152141;152142;152143;152144 121038;121039;121040;121041;121042;121043;121044;121045;121046;121047;121048;121049;121050 121042 11 GDVHDIGK Unmodified 839.41373 0.41373097 4049 Q99707 MTR Methionine synthase yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 8.7992 6.0541 2 0.024425 8561 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.296 41.193 109830000 0 106190000 3643300 0 0 0 0 0 0 0 0 0 0 0 0 18156 4049 16530 152145;152146 121051 121051 1 GDVHQALIVLQK Unmodified 1319.7561 0.75613491 2310 Q13535 ATR Serine/threonine-protein kinase ATR yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 69.028 63.023 3 0.0020026 84142 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.802 34.429 20142000 15468000 0 4674400 0 0 0 0 0 0 0 0 0 0 0 0 18157 2310 16531 152147;152148 121052;121053;121054 121052 3 GDVLHMHYTGK Oxidation (M) 1272.5921 0.59210605 1212 P26885 FKBP2 Peptidyl-prolyl cis-trans isomerase FKBP2 yes yes 0 1 0 By MS/MS By MS/MS 2 0 4 2 2 26.718 22.478 2;3 0.0057481 28019 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 68.44 58.785 237110000 171300000 0 65809000 0 0 0 0 0 0 0 0 0 0 0 0 18158 1212 16532 152149;152150;152151;152152 121055;121056;121057;121058;121059 121059 1778 4 GDVLHMHYTGK Unmodified 1256.5972 0.59719142 1212 P26885 FKBP2 Peptidyl-prolyl cis-trans isomerase FKBP2 yes yes 0 0 0 By MS/MS 2 0 1 1 43.283 36.49 2 0.00085686 50239 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.309 79.158 13879000 13879000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18159 1212 16532 152153 121060 121060 1 GDVLTIVAVTK Unmodified 1114.6598 0.6597749 1438 P41240 CSK Tyrosine-protein kinase CSK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.5 3.55 1 1 4 1 1 1 1 1 1 78.661 76.862 2 0.019515 92538 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 59.426 33.042 35687000 8824600 10685000 0 0 0 0 0 0 0 3807700 4638500 0 1843300 0 5887800 18160 1438 16533 152154;152155;152156;152157;152158;152159 121061;121062;121063 121062 3 GDVMDVIEKPENDPEWWK Unmodified 2185.999 0.99902031 1035 P16333 NCK1 Cytoplasmic protein NCK1 yes yes 0 0 1 By MS/MS 2 0 1 1 89.756 81.625 3 0.0039316 106012 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.382 35.9 16903000 16903000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18161 1035 16534 152160 121064 121064 1 GDVMSTACGTPGYVAPEVLAQK Unmodified 2250.0661 0.066054015 3214 Q8IU85 CAMK1D Calcium/calmodulin-dependent protein kinase type 1D yes yes 0 0 0 By MS/MS 2 0 1 1 81.511 76.806 3 0.0016039 95619 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 48.229 48.229 141810000 0 141810000 0 0 0 0 0 0 0 0 0 0 0 0 0 18162 3214 16535 152161 121065 121065 0 GDVPSVGLEGPDVDLQGPEAK Unmodified 2078.0168 0.016778861 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.65 1.63 1 22 1 2 1 2 2 2 2 2 2 2 2 1 2 79.021 78.884 2;3 1.9089E-72 95986 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 190.44 180.38 349510000 0 28212000 0 12068000 12222000 20974000 21564000 33042000 25881000 25101000 25006000 41791000 28028000 21298000 54321000 18163 2172 16536 152162;152163;152164;152165;152166;152167;152168;152169;152170;152171;152172;152173;152174;152175;152176;152177;152178;152179;152180;152181;152182;152183;152184 121066;121067;121068;121069;121070;121071;121072;121073;121074;121075;121076;121077;121078;121079;121080 121071 15 GDVQAVAYEEPK Unmodified 1304.6248 0.62484596 2580 Q15797 SMAD1 Mothers against decapentaplegic homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 2 1 1 2 1 1 1 1 56.507 56.632 2 0.00076721 44393 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 90.05 63.161 186000000 0 0 0 4196300 0 10306000 39925000 0 7199400 0 0 0 50754000 0 73623000 18164 2580 16537 152185;152186;152187;152188;152189;152190;152191;152192;152193;152194 121081;121082;121083;121084;121085;121086;121087;121088;121089 121085 8 GDVSGVLIAGGENGNIILYDPSK Unmodified 2287.1696 0.16959111 614 O94979 SEC31A Protein transport protein Sec31A yes yes 0 0 0 By MS/MS 2 0 1 1 90.915 82.785 2 2.0694E-23 107460 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 132.59 129.96 15207000 15207000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18165 614 16538 152195 121090 121090 1 GDVSNLDPNFSFEGTK Unmodified 1725.7846 0.78459408 2059 Q01650 SLC7A5 Large neutral amino acids transporter small subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 76.384 76.048 2 3.0908E-38 93051 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 164.48 132.64 174730000 0 29259000 0 4794100 9189800 0 8323600 10599000 10697000 15421000 12606000 21293000 12003000 18155000 22392000 18166 2059 16539 152196;152197;152198;152199;152200;152201;152202;152203;152204;152205;152206;152207 121091;121092;121093;121094;121095;121096;121097;121098;121099;121100;121101;121102 121093 12 GDVTAEEAAGASPAK Unmodified 1372.647 0.64703797 1557 P49006 MARCKSL1 MARCKS-related protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.186 27.384 2 1.5299E-59 28916 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 176.8 147.06 996810000 0 0 0 39402000 37261000 61949000 40487000 52164000 31907000 151840000 236440000 135160000 50915000 62575000 96706000 18167 1557 16540 152208;152209;152210;152211;152212;152213;152214;152215;152216;152217;152218;152219 121103;121104;121105;121106;121107;121108;121109;121110;121111;121112;121113;121114;121115 121113 13 GDVTAQIALQPALK Unmodified 1423.8035 0.80347903 776 P04179 SOD2 Superoxide dismutase [Mn], mitochondrial yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 77.588 73.461 2 3.204E-45 91623 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 178.08 155.5 179480000 0 179480000 0 0 0 0 0 0 0 0 0 0 0 0 0 18168 776 16541 152220;152221 121116;121117 121116 2 GDVTITNDGATILK Unmodified 1416.746 0.74602373 1642 P50991 CCT4 T-complex protein 1 subunit delta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.73 3.98 2 9 3 12 5 8 1 1 1 1 1 1 1 1 1 1 1 1 1 69.996 68.048 2 2.2134E-31 84113 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 152.07 125.55 9307200000 201890000 6680000000 16179000 102810000 129480000 226220000 150380000 149780000 123170000 242490000 248480000 268670000 174440000 202460000 390720000 18169 1642 16542 152222;152223;152224;152225;152226;152227;152228;152229;152230;152231;152232;152233;152234;152235;152236;152237;152238;152239;152240;152241;152242;152243;152244;152245;152246;152247 121118;121119;121120;121121;121122;121123;121124;121125;121126;121127;121128;121129;121130;121131;121132;121133;121134;121135;121136;121137;121138;121139;121140;121141;121142;121143;121144;121145;121146;121147;121148 121137 29 GDVVLQSDHVIETLTK Unmodified 1752.9258 0.92577901 121 O00159 MYO1C Unconventional myosin-Ic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 78.063 77.549 3 0.00083514 88920 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.201 37.566 86974000 0 10842000 5142800 0 4944400 5982600 3435900 5703300 5930200 8713500 7898800 8619300 0 5342500 14418000 18170 121 16543 152248;152249;152250;152251;152252;152253;152254;152255;152256;152257;152258;152259 121149;121150;121151;121152;121153;121154;121155;121156 121151 8 GDVVNQDDLYQALASGK Unmodified 1791.8639 0.86390703 4852 Q9UBQ7 GRHPR Glyoxylate reductase/hydroxypyruvate reductase yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS 10 0 5 1 1 1 1 1 79.262 79.406 2 1.0093E-18 91978 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 102.9 94.158 52966000 0 0 0 0 0 10547000 0 0 10337000 0 4119800 0 0 4457500 23505000 18171 4852 16544 152260;152261;152262;152263;152264 121157 121157 1 GDWSVGAPGGVQEITYTVPADK Unmodified 2246.0855 0.085527129 3873 Q96I24 FUBP3 Far upstream element-binding protein 3 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 81.557 81.66 2 8.9382E-08 94248 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.394 69.861 63869000 0 0 0 0 4547700 6073300 2887900 4746800 4385300 5790800 5474700 5430600 2822100 5283600 16426000 18172 3873 16545 152265;152266;152267;152268;152269;152270;152271;152272;152273;152274;152275 121158;121159;121160;121161;121162;121163;121164 121159 7 GDYAPILQK Unmodified 1003.5338 0.53384611 4737 Q9NY33 DPP3 Dipeptidyl peptidase 3 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 47.872 48.266 2 0.010275 53234 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.567 24.904 16797000 0 0 0 0 0 0 2319600 0 0 0 0 0 0 0 14478000 18173 4737 16546 152276;152277 121165 121165 1 GDYDVTVPK Unmodified 992.48148 0.48147619 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 42.368 42.556 2 0.0080109 46611 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 70.856 46.657 227890000 0 0 0 16510000 11843000 0 18670000 19394000 14540000 20759000 16655000 30205000 26582000 20500000 32230000 18174 2172 16547 152278;152279;152280;152281;152282;152283;152284;152285;152286;152287;152288 121166;121167;121168;121169;121170;121171;121172 121169 7 GDYDVVINDYEK Unmodified 1428.6409 0.64088996 3909 Q96KP1 EXOC2 Exocyst complex component 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 63.979 63.466 2 0.0014569 72863 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 67.726 59.032 66206000 0 26170000 0 0 2598300 3662200 3348100 0 0 5637000 5994000 5177800 0 7640900 5977400 18175 3909 16548 152289;152290;152291;152292;152293;152294;152295;152296;152297 121173;121174;121175;121176;121177;121178;121179;121180 121179 8 GDYFRYLAEVACGDDRK Unmodified 2033.9265 0.92652407 1214 P27348 YWHAQ 14-3-3 protein theta yes yes 0 0 2 By MS/MS 2 0 1 1 87.696 79.566 4 0.0055205 103629 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.548 39.326 7263100 7263100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18176 1214 16549 152298 121181 121181 1 GDYFRYLSEVASGDNK Unmodified 1819.8377 0.83769228 1311 P31946 YWHAB 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS 2.4 0.49 3 2 3 2 85.216 80.221 2;3 1.3682E-56 100849 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 204.18 167.76 423240000 212630000 210610000 0 0 0 0 0 0 0 0 0 0 0 0 0 18177 1311 16550 152299;152300;152301;152302;152303 121182;121183;121184;121185;121186 121182 3 GDYPLEAVR Unmodified 1018.5084 0.50835964 1000 P14618 PKM Pyruvate kinase PKM yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.263 51.411 2 0.0034358 56908 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 106.04 88.656 4611000000 0 0 0 239010000 261270000 315820000 310780000 323440000 271890000 349590000 625980000 623040000 106110000 294410000 889700000 18178 1000 16551 152304;152305;152306;152307;152308;152309;152310;152311;152312;152313;152314;152315 121187;121188;121189;121190;121191;121192;121193;121194;121195;121196;121197 121189 10 GDYYEAHQMYR Unmodified 1431.5877 0.58774895 3051 Q7L5D6 GET4 Golgi to ER traffic protein 4 homolog yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 34.514 34.654 2 0.043293 37090 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.203 33.052 8891400 0 0 0 0 692280 0 0 0 0 0 0 0 0 0 8199200 18179 3051 16552 152316;152317 121198 121198 1 GDYYRYLAEVAAGDDK Unmodified 1804.8268 0.82679325 1940 P63104 YWHAZ 14-3-3 protein zeta/delta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0.535 1 5 1 4 2 1 86.674 82.441 2;3 1.0419E-29 99407 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 166.6 134.54 2214500000 1080300000 1038100000 96184000 0 0 0 0 0 0 0 0 0 0 0 0 18180 1940 16553 152318;152319;152320;152321;152322;152323;152324 121199;121200;121201;121202;121203;121204;121205;121206;121207;121208;121209 121206 10 GDYYRYLAEVAAGDDKK Unmodified 1932.9218 0.92175626 1940 P63104 YWHAZ 14-3-3 protein zeta/delta yes yes 0 0 2 By MS/MS By MS/MS By MS/MS 2.17 0.687 1 3 2 3 2 1 84.104 81.19 3;4 3.8343E-06 89969 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 95.814 84.999 694780000 507550000 183770000 3458100 0 0 0 0 0 0 0 0 0 0 0 0 18181 1940 16554 152325;152326;152327;152328;152329;152330 121210;121211;121212;121213;121214;121215 121213 5 GDYYRYLAEVASGEK Unmodified 1719.8104 0.8104149 2109 Q04917 YWHAH 14-3-3 protein eta yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 2 2 2 2 82.828 77.859 3 0.00013488 99016 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.754 89.959 227270000 109530000 117740000 0 0 0 0 0 0 0 0 0 0 0 0 0 18182 2109 16555 152331;152332;152333;152334 121216;121217;121218;121219 121218 4 GDYYRYLAEVATGDDK Unmodified 1834.8374 0.83735793 1312 P31947 SFN 14-3-3 protein sigma yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 1 3 2 82.802 78.494 2;3 2.9548E-05 99216 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.873 84.182 404580000 149320000 232880000 22380000 0 0 0 0 0 0 0 0 0 0 0 0 18183 1312 16556 152335;152336;152337;152338;152339;152340 121220;121221;121222;121223;121224;121225;121226 121224 6 GDYYRYLAEVATGDDKK Unmodified 1962.9323 0.93232095 1312 P31947 SFN 14-3-3 protein sigma yes yes 0 0 2 By MS/MS By MS/MS 2.5 0.5 2 2 2 2 79.468 74.453 3 1.4152E-25 95395 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 124.26 112.21 224620000 141410000 83214000 0 0 0 0 0 0 0 0 0 0 0 0 0 18184 1312 16557 152341;152342;152343;152344 121227;121228 121228 1 GDYYRYLAEVATGEK Unmodified 1733.8261 0.82606496 1869 P61981 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.5 0.5 4 4 4 3 1 83.352 78.674 2;3 1.4063E-29 100304 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 154.65 122.15 926250000 417800000 488080000 20374000 0 0 0 0 0 0 0 0 0 0 0 0 18185 1869 16558 152345;152346;152347;152348;152349;152350;152351;152352 121229;121230;121231;121232;121233;121234;121235;121236;121237 121236 7 GEAAAERPGEAAVASSPSK Unmodified 1783.8701 0.87005504 1256 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.03 3.41 7 1 24 2 4 2 2 2 2 2 2 2 2 2 2 2 2 2 25.058 24.24 2;3 8.0415E-198 25121 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 224.33 201.75 5102100000 97061000 1339500000 77222000 201490000 174000000 121380000 211740000 241820000 227350000 322650000 695980000 365820000 336540000 258430000 431110000 18186 1256 16559 152353;152354;152355;152356;152357;152358;152359;152360;152361;152362;152363;152364;152365;152366;152367;152368;152369;152370;152371;152372;152373;152374;152375;152376;152377;152378;152379;152380;152381;152382;152383;152384 121238;121239;121240;121241;121242;121243;121244;121245;121246;121247;121248;121249;121250;121251;121252;121253;121254;121255;121256;121257;121258;121259;121260;121261;121262;121263;121264;121265;121266;121267;121268;121269;121270;121271;121272;121273 121258 36 GEAAAQADKPNSK Unmodified 1285.6262 0.62624295 4953 Q9UK53 ING1 Inhibitor of growth protein 1 yes yes 0 0 1 By MS/MS 3 0 1 1 6.4143 3.0531 3 0.0049183 4491 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 54.898 47.517 17116000 0 17116000 0 0 0 0 0 0 0 0 0 0 0 0 0 18187 4953 16560 152385 121274 121274 1 GEAACQELLR Unmodified 1145.5499 0.54990688 449 O60936 NOL3 Nucleolar protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 39.084 39.831 2 0.011018 43776 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 54.982 37.885 15811000 0 0 0 0 0 0 0 0 0 0 0 7744100 0 0 8067100 18188 449 16561 152386;152387;152388;152389 121275;121276;121277 121277 3 GEAAPGPAPPAPEATPPPASAAGK Unmodified 2108.0538 0.05383307 4628 Q9NSI2 FAM207A Protein FAM207A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.62 3.25 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 60.554 61.148 3 1.7445E-38 92351 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 81.477 72.535 271380000 28401000 17031000 0 17643000 13922000 22575000 20254000 12471000 0 28796000 21044000 22554000 17185000 17634000 31872000 18189 4628 16562 152390;152391;152392;152393;152394;152395;152396;152397;152398;152399;152400;152401;152402 121278;121279;121280;121281;121282 121279 5 GEADAMSLDGGYVYTAGK Oxidation (M) 1819.7934 0.79344421 764 P02788 LTF Lactotransferrin;Lactoferricin-H;Kaliocin-1;Lactoferroxin-A;Lactoferroxin-B;Lactoferroxin-C yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 57.297 57.451 2 2.8068E-26 65253 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 106.17 100.33 10641000 0 0 0 0 0 0 0 0 0 10641000 0 0 0 0 0 18190 764 16563 152403;152404 121283;121284 121283 919 2 GEADAMSLDGGYVYTAGK Unmodified 1803.7985 0.79852959 764 P02788 LTF Lactotransferrin;Lactoferricin-H;Kaliocin-1;Lactoferroxin-A;Lactoferroxin-B;Lactoferroxin-C yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 70.165 70.279 2 8.6569E-27 80786 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 110.38 100.43 9986300 0 0 0 0 0 0 0 0 0 6590900 0 0 3395400 0 0 18191 764 16563 152405;152406 121285;121286 121285 2 GEADILAALK Unmodified 999.56006 0.56006086 2204 Q12899 TRIM26 Tripartite motif-containing protein 26 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 81.95 78.434 2 0.0047175 97388 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.294 38.254 114590000 0 110620000 3962200 0 0 0 0 0 0 0 0 0 0 0 0 18192 2204 16564 152407;152408;152409;152410 121287;121288;121289;121290 121287 4 GEADRDTYRR Unmodified 1237.58 0.57996145 1513 P46783 RPS10 40S ribosomal protein S10 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.0322 6.1496 3 0.014538 4131 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 102.52 76.406 448900000 0 0 0 30155000 26778000 34451000 33621000 23477000 28114000 27252000 41412000 53459000 48082000 33541000 68560000 18193 1513 16565 152411;152412;152413;152414;152415;152416;152417;152418;152419;152420;152421;152422 121291;121292;121293 121293 2 GEAEALSRTLDK Unmodified 1288.6623 0.6622941 4112 Q9BRP8 WIBG Partner of Y14 and mago yes yes 0 0 1 By MS/MS By MS/MS 2.14 0.35 6 1 5 2 45.052 40.287 2;3 2.3062E-67 50360 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 267.85 198.04 225840000 0 86962000 138880000 0 0 0 0 0 0 0 0 0 0 0 0 18194 4112 16566 152423;152424;152425;152426;152427;152428;152429 121294;121295;121296;121297;121298;121299 121299 5 GEAEVGGGGAAGDK Unmodified 1173.5262 0.52619455 4660 Q9NV56 MRGBP MRG/MORF4L-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 8.4309 8.5974 2 0.00020909 6251 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.979 65.317 23109000 0 0 0 0 1388100 1397500 0 985010 1318800 1646200 7180800 3589400 1984500 1150500 2468300 18195 4660 16567 152430;152431;152432;152433;152434;152435;152436;152437;152438;152439 121300;121301;121302;121303;121304;121305;121306 121300 7 GEAEVGGGGAAGDK Acetyl (Protein N-term) 1215.5368 0.53675924 4660 Q9NV56 MRGBP MRG/MORF4L-binding protein yes yes 1 0 0 By matching By MS/MS By matching 10 0 3 1 1 1 21.503 22.046 2 0.0075075 21635 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 46.352 35.131 6627400 0 0 0 0 0 0 0 0 0 0 0 2294700 0 1774700 2558000 18196 4660 16567 152440;152441;152442 121307 121307 1 GEAGAGAGASGGPEASPEAEVVK Acetyl (Protein N-term) 2038.9443 0.9443422 4154 Q9BTY7 HGH1 Protein HGH1 homolog yes yes 1 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 9.36 2.32 1 13 1 1 1 1 1 1 1 1 1 2 1 2 59.18 59.683 2;3 2.5354E-172 63339 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 201.3 189.69 135640000 52951000 0 0 3541600 2770500 5305300 4077100 4599900 2796700 7832600 7498200 0 14842000 6099300 23328000 18197 4154 16568 152443;152444;152445;152446;152447;152448;152449;152450;152451;152452;152453;152454;152455;152456 121308;121309;121310;121311;121312 121309 5 GEAGAGAGASGGPEASPEAEVVK Unmodified 1996.9338 0.93377751 4154 Q9BTY7 HGH1 Protein HGH1 homolog yes yes 0 0 0 By MS/MS 10 0 1 1 44.34 44.39 2 0.024339 49897 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 46.408 38.497 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18198 4154 16568 152457 121313 121313 1 GEAGTPVAAGTTAAAIPR Unmodified 1609.8424 0.84238373 5293 Q9Y6R0 NUMBL Numb-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.254 56.379 2 4.0138E-11 63779 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 89.013 78.783 147330000 0 0 0 7807400 9287300 9222300 13451000 10628000 10525000 12802000 16727000 20415000 8812800 10264000 17388000 18199 5293 16569 152458;152459;152460;152461;152462;152463;152464;152465;152466;152467;152468;152469 121314;121315;121316;121317;121318;121319;121320;121321;121322;121323;121324 121316 11 GEAIKYLTEALQSISELELEDK Unmodified 2478.2741 0.27411576 1782 P56282 POLE2 DNA polymerase epsilon subunit 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 76.766 76.808 3 0.031835 88394 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 20.814 12.627 61384000 0 0 0 3422900 2883000 7605100 5409600 0 6225200 5209200 8877700 5695400 0 6621900 9434000 18200 1782 16570 152470;152471;152472;152473;152474;152475;152476;152477;152478;152479 121325 121325 1 GEALSALDSK Unmodified 989.50294 0.50293991 492 O75396 SEC22B Vesicle-trafficking protein SEC22b yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 37.103 37.561 2 0.0071865 41714 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 63.076 36.904 67153000 0 0 0 0 0 0 0 0 0 8049300 9447700 16131000 11916000 7714500 13894000 18201 492 16571 152480;152481;152482;152483;152484;152485;152486 121326;121327;121328;121329 121329 4 GEASSSNPATPIK Unmodified 1257.6201 0.62009493 2155 Q08378 GOLGA3 Golgin subfamily A member 3 yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 22.768 22.635 2 0.00057508 23826 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 77.379 62.712 82403000 0 6445500 0 3537500 2996700 5094200 3943800 4283600 4555000 5878900 9893100 10544000 6898700 8184300 10148000 18202 2155 16572 152487;152488;152489;152490;152491;152492;152493;152494;152495;152496;152497;152498;152499 121330;121331;121332 121331 3 GEATVSFDDPPSAK Unmodified 1419.6518 0.65178899 3664;1363 Q92804;P35637 TAF15;FUS TATA-binding protein-associated factor 2N;RNA-binding protein FUS no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.39 3.71 1 3 2 12 3 2 1 1 1 1 1 1 1 1 1 1 1 1 1 52.187 51.028 2 2.5156E-29 93280 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 169.52 151.65 5342400000 173380000 622950000 3976300 350600000 272340000 328460000 395900000 225050000 251420000 433350000 536970000 449710000 411860000 400600000 485830000 18203 3664;1363 16573 152500;152501;152502;152503;152504;152505;152506;152507;152508;152509;152510;152511;152512;152513;152514;152515;152516;152517 121333;121334;121335;121336;121337;121338;121339;121340;121341;121342;121343;121344;121345;121346;121347;121348;121349;121350;121351;121352 121343 19 GEAVLGTHK Unmodified 910.48723 0.48723027 4233 Q9BXS6 NUSAP1 Nucleolar and spindle-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 11.876 11.385 2 0.01612 9333 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 56.81 28.703 81989000 0 62008000 0 1228100 1235500 1618800 2596000 1250300 2283800 2289700 0 3980700 1424700 2073000 0 18204 4233 16574 152518;152519;152520;152521;152522;152523;152524;152525;152526;152527;152528;152529 121353;121354;121355;121356;121357 121357 5 GEAVQEELLK Unmodified 1114.587 0.58700389 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 51.236 50.232 2 0.0040734 56726 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 74.173 33.291 1040300000 0 113870000 0 91740000 0 0 0 104650000 126460000 0 0 187800000 146400000 130870000 138500000 18205 2361 16575 152530;152531;152532;152533;152534;152535;152536;152537;152538 121358;121359;121360 121360 3 GECIVSDFTIGRK Unmodified 1480.7344 0.73441319 1707 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 66.913 67.065 3 0.00069827 77271 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 59.898 52.469 185920000 0 0 0 0 4167900 13838000 11150000 9678600 15676000 14329000 15268000 22606000 15317000 17831000 46057000 18206 1707 16576 152539;152540;152541;152542;152543;152544;152545;152546;152547;152548;152549 121361;121362;121363;121364;121365;121366;121367;121368;121369;121370;121371 121369 10 GEDAPLDQGSGAILASTFSK Unmodified 1962.9535 0.95345032 1791 P57081 WDR4 tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4 yes yes 0 0 0 By MS/MS 2.67 0.471 1 2 3 84.397 80.648 2;3 3.3086E-91 100052 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 160.8 147.38 93397000 0 93397000 0 0 0 0 0 0 0 0 0 0 0 0 0 18207 1791 16577 152550;152551;152552 121372;121373;121374 121372 2 GEDEEENNLEVR Unmodified 1431.6114 0.61138074 788 P04843 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.591 30.78 2 2.1609E-81 33056 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 202.2 138.88 134060000 0 0 0 11448000 7670800 11864000 7137100 9546900 9234400 13374000 11669000 14023000 11784000 10840000 15466000 18208 788 16578 152553;152554;152555;152556;152557;152558;152559;152560;152561;152562;152563;152564 121375;121376;121377;121378;121379;121380;121381;121382;121383;121384;121385;121386;121387;121388 121385 14 GEDEELLTVNPESNSLALVYRDRETLK Unmodified 3089.5517 0.5516876 3337 Q8N543 OGFOD1 Prolyl 3-hydroxylase OGFOD1 yes yes 0 0 2 By MS/MS 2 0 1 1 89.056 80.926 4 5.1088E-07 105165 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.771 42.544 26487000 26487000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18209 3337 16579 152565 121389 121389 1 GEDELCDSGR Unmodified 1136.4404 0.44041601 372 O43823 AKAP8 A-kinase anchor protein 8 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 15.775 15.837 2 0.011018 15873 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 54.982 35.195 3729700 0 0 0 0 0 2230600 0 0 0 1499100 0 0 0 0 0 18210 372 16580 152566;152567 121390 121390 1 GEDEYANVDAIVVSVGVDEEIVYAK Unmodified 2682.2912 0.29122239 5231 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.5 0.5 2 2 1 1 2 97.115 94.171 2;3 2.7807E-38 114353 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 112.48 105.9 49500000 5560800 10935000 33004000 0 0 0 0 0 0 0 0 0 0 0 0 18211 5231 16581 152568;152569;152570;152571 121391;121392;121393;121394;121395;121396;121397 121395 7 GEDFPANNIVK Unmodified 1202.5932 0.5931519 1476 P43307 SSR1 Translocon-associated protein subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 55.685 54.749 2 0.00052492 63325 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 99.442 74.498 263570000 0 29928000 0 44922000 29966000 37443000 39820000 36771000 0 44720000 0 0 0 0 0 18212 1476 16582 152572;152573;152574;152575;152576;152577;152578 121398;121399;121400;121401;121402;121403;121404;121405;121406;121407 121406 10 GEDKDEGPVAEQVK Unmodified 1499.7104 0.71036651 3576 Q8WWM7 ATXN2L Ataxin-2-like protein yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 24.557 20.469 3 0.0017229 25717 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 70.68 62.769 41125000 0 41125000 0 0 0 0 0 0 0 0 0 0 0 0 0 18213 3576 16583 152579;152580 121408;121409 121409 1 GEDLDSQVGVIDFSLYLK Unmodified 1996.9993 0.99933788 3998 Q96T51 RUFY1 RUN and FYVE domain-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 98.306 90.176 2 1.3993E-07 116357 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 120.53 114.49 24911000 24911000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18214 3998 16584 152581 121410 121410 1 GEDLTEEEDGGIIR Unmodified 1531.7002 0.70019575 2080 Q02790 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.099 56.225 2 2.5651E-19 63936 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 136.02 104.53 160540000 0 0 0 7274000 4460700 18903000 9731200 7729800 6577500 9624200 14756000 14451000 6813700 19245000 40969000 18215 2080 16585 152582;152583;152584;152585;152586;152587;152588;152589;152590;152591;152592;152593 121411;121412;121413;121414;121415;121416;121417;121418;121419;121420;121421;121422 121417 12 GEDLTEEEDGGIIRR Unmodified 1687.8013 0.80130678 2080 Q02790 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 1 2 1 1 1 1 2 1 1 2 2 48.243 48.455 2;3 1.0121E-31 54324 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 116.84 99.769 569430000 0 0 0 15565000 11721000 71586000 19275000 22156000 21711000 29003000 60492000 52724000 26795000 54710000 183690000 18216 2080 16586 152594;152595;152596;152597;152598;152599;152600;152601;152602;152603;152604;152605;152606;152607;152608;152609 121423;121424;121425;121426;121427;121428;121429;121430;121431;121432;121433;121434;121435;121436 121425 14 GEDNAIEMSEDFDGK Unmodified 1655.6621 0.66209568 4641 Q9NU22 MDN1 Midasin yes yes 0 0 0 By MS/MS 10 0 1 1 62.474 62.67 2 0.016729 70770 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 52.693 45.839 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18217 4641 16587 152610 121437 121437 1 GEDNIDFMPTILSR Oxidation (M) 1622.761 0.76102187 1333 P33992 MCM5 DNA replication licensing factor MCM5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 79.431 79.571 2 7.2632E-05 91171 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 83.182 74.178 52059000 0 0 0 0 0 5435500 0 3797300 3059500 4630200 5349600 5619600 4172000 7522900 12472000 18218 1333 16588 152611;152612;152613;152614;152615;152616;152617;152618;152619 121438;121439;121440;121441;121442;121443;121444;121445;121446 121444 2000 9 GEDNIDFMPTILSR Unmodified 1606.7661 0.76610725 1333 P33992 MCM5 DNA replication licensing factor MCM5 yes yes 0 0 0 By MS/MS 10 0 1 1 88.134 88.284 2 8.7396E-05 102124 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 103.91 92.043 17709000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17709000 18219 1333 16588 152620 121447 121447 1 GEDPFTSETVDPEMEGDDNLGGEDKK Oxidation (M) 2826.1662 0.16615781 372 O43823 AKAP8 A-kinase anchor protein 8 yes yes 0 1 1 By MS/MS By MS/MS By matching By matching 7 3.69 1 1 3 2 1 1 1 65.817 63.701 3 1.8767E-07 74280 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 44.258 44.258 61605000 0 44917000 0 4465600 0 0 4073500 0 0 0 0 0 0 0 8149000 18220 372 16589 152621;152622;152623;152624;152625 121448;121449 121449 472 2 GEDPFTSETVDPEMEGDDNLGGEDKK Unmodified 2810.1712 0.17124319 372 O43823 AKAP8 A-kinase anchor protein 8 yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 75.203 69.302 3 3.9676E-05 89795 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.018 46.475 11300000 7274000 4026200 0 0 0 0 0 0 0 0 0 0 0 0 0 18221 372 16589 152626;152627 121450;121451 121451 2 GEDSAEETEAK Unmodified 1164.4782 0.4782413 2207 Q12906 ILF3 Interleukin enhancer-binding factor 3 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By matching 8.86 2.8 1 6 1 1 1 1 1 1 1 6.4309 6.0317 2 0.00060971 6651 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.044 89.122 11884000 5861700 0 0 624270 0 1226700 880840 0 1324000 0 0 0 0 724040 1242000 18222 2207 16590 152628;152629;152630;152631;152632;152633;152634 121452;121453 121453 2 GEDSEPVTSK Unmodified 1047.472 0.47203371 3371 Q8N8S7 ENAH Protein enabled homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 8.0336 8.1882 2 0.0020595 6731 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 86.67 67.865 59435000 0 0 0 0 2938000 7255500 3784300 3283900 6410800 4619300 7888700 5689100 4521700 4140700 8903500 18223 3371 16591 152635;152636;152637;152638;152639;152640;152641;152642;152643;152644;152645 121454;121455;121456;121457;121458;121459;121460;121461;121462;121463 121462 10 GEDSVPDTVHHVVVPVNPK Unmodified 2024.0327 0.032703697 3608 Q92499 DDX1 ATP-dependent RNA helicase DDX1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.57 3.6 8 3 24 3 6 2 2 2 2 2 2 2 2 2 2 2 2 2 59.958 58.605 3;4 3.5415E-65 73293 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 144.33 140.55 2523900000 91258000 965850000 521820000 43766000 44924000 91740000 63031000 65862000 57737000 92464000 89690000 96308000 76790000 70401000 152300000 18224 3608 16592 152646;152647;152648;152649;152650;152651;152652;152653;152654;152655;152656;152657;152658;152659;152660;152661;152662;152663;152664;152665;152666;152667;152668;152669;152670;152671;152672;152673;152674;152675;152676;152677;152678;152679;152680 121464;121465;121466;121467;121468;121469;121470;121471;121472;121473;121474;121475;121476;121477;121478;121479;121480;121481;121482;121483;121484;121485;121486;121487;121488;121489;121490;121491;121492;121493;121494;121495;121496;121497;121498;121499;121500;121501;121502 121490 31 GEDVNRTLEGGRK Unmodified 1429.7274 0.72735397 1803 P58546 MTPN Myotrophin yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 7.62 3.58 3 1 9 2 1 1 1 1 1 1 1 1 1 1 1 15.781 14.8 3 2.7494E-05 21672 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.069 60.438 381440000 81571000 30468000 135360000 0 0 5375200 2563100 0 3182400 8286100 22215000 21522000 8194200 14516000 48187000 18225 1803 16593 152681;152682;152683;152684;152685;152686;152687;152688;152689;152690;152691;152692;152693 121503;121504;121505;121506;121507;121508;121509 121505 5 GEDVPLTEQTVSQVLQSAK Unmodified 2028.0375 0.037514303 1861 P61923 COPZ1 Coatomer subunit zeta-1 yes yes 0 0 0 By MS/MS 10 0 1 1 86.668 86.827 2 1.2058E-05 100414 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.647 75.923 3318500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3318500 18226 1861 16594 152694 121510 121510 1 GEEAFQMSEVDEESGLK Unmodified 1883.8095 0.8094882 2456 Q14966 ZNF638 Zinc finger protein 638 yes yes 0 0 0 By MS/MS 2 0 1 1 74.421 69.266 2 1.1621E-06 86999 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.98 83.213 52753000 0 52753000 0 0 0 0 0 0 0 0 0 0 0 0 0 18227 2456 16595 152695 121511 121511 1 GEEEVFLIGK Unmodified 1119.5812 0.58119023 604 O94916 NFAT5 Nuclear factor of activated T-cells 5 yes yes 0 0 0 By MS/MS 10 0 1 1 71.537 71.687 2 0.037339 82462 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 40.882 21.179 2649500 0 0 0 0 0 0 2649500 0 0 0 0 0 0 0 0 18228 604 16596 152696 121512 121512 1 GEEFPLTLGR Unmodified 1117.5768 0.57677356 3577 Q8WWV3 RTN4IP1 Reticulon-4-interacting protein 1, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 75.974 76.086 2 0.0067887 87797 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 64.04 38.146 48298000 0 0 0 0 2797100 5623500 1842400 3173100 3302600 3486400 5095600 5630000 5035400 4711900 7599500 18229 3577 16597 152697;152698;152699;152700;152701;152702;152703;152704;152705;152706;152707 121513;121514;121515;121516;121517;121518;121519;121520;121521 121513 9 GEEILSGAQR Unmodified 1058.5356 0.53563702 1009 P14868 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 31.201 31.465 2 0.011165 33784 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 54.722 19.57 51893000 0 0 0 3106600 0 5322400 0 3160200 3583700 4968500 6292800 8979000 3858100 4713100 7908900 18230 1009 16598 152708;152709;152710;152711;152712;152713;152714;152715;152716;152717 121522;121523;121524;121525;121526;121527;121528;121529 121528 7 GEEIPTQKPDQ Unmodified 1240.5935 0.59354583 2406 Q14432 PDE3A cGMP-inhibited 3',5'-cyclic phosphodiesterase A yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 26.563 26.737 2 0.021467 28713 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 84.615 57.726 137790000 0 0 0 9185300 14010000 14088000 14489000 11179000 9282500 14974000 15152000 17903000 0 0 17529000 18231 2406 16599 152718;152719;152720;152721;152722;152723;152724;152725;152726;152727 121530 121530 1 GEEIYSMDEGIR Unmodified 1397.6133 0.613295 3946 Q96P70 IPO9 Importin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.253 60.358 2 0.00052266 67885 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 94.692 88.388 124200000 0 0 0 5583600 3909700 17718000 4490500 6506300 3623600 15978000 12341000 13927000 7324000 9868500 22927000 18232 3946 16600 152728;152729;152730;152731;152732;152733;152734;152735;152736;152737;152738;152739 121531;121532;121533;121534;121535;121536;121537;121538;121539;121540;121541;121542;121543;121544;121545 121539 15 GEEIYSMDEGIR Oxidation (M) 1413.6082 0.60820962 3946 Q96P70 IPO9 Importin-9 yes yes 0 1 0 By MS/MS By MS/MS 6 4 1 1 1 1 45.843 43.087 2 0.029262 54827 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 55.401 14.686 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18233 3946 16600 152740;152741 121546;121547 121547 5429 2 GEEIYSMDEGIRTR Unmodified 1654.7621 0.7620845 3946 Q96P70 IPO9 Importin-9 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 59.777 53.736 3 0.00071862 72509 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.622 59.36 46445000 17623000 0 28822000 0 0 0 0 0 0 0 0 0 0 0 0 18234 3946 16601 152742;152743 121548;121549 121548 2 GEEIYSMDEGIRTR Oxidation (M) 1670.757 0.75699912 3946 Q96P70 IPO9 Importin-9 yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 43.112 38.669 3 0.0033814 48959 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 58.071 53.853 49269000 0 19176000 30094000 0 0 0 0 0 0 0 0 0 0 0 0 18235 3946 16601 152744;152745 121550;121551 121551 5429 2 GEEIYSMDEGIRTRSK Unmodified 1869.8891 0.88907593 3946 Q96P70 IPO9 Importin-9 yes yes 0 0 2 By MS/MS 2 0 1 1 54.316 46.253 3 0.031599 63564 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.592 24.76 10450000 10450000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18236 3946 16602 152746 121552 121552 0 GEELFTGVVPILVELDGDVNGHK Unmodified 2436.2537 0.25365509 110 CON__Q9U6Y5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 100.69 96.246 3 4.1264E-30 100501 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 107.39 104.34 + 338780000 192130000 106710000 39929000 0 0 0 0 0 0 0 0 0 0 0 0 18237 110 16603 152747;152748;152749;152750;152751 121553;121554;121555;121556 121554 3 GEELLSPLNLEQAAYAR Unmodified 1872.9581 0.95814177 121 O00159 MYO1C Unconventional myosin-Ic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 87.753 87.852 2 0.011075 101432 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 41.242 34.809 35589000 0 0 0 0 2583800 3556300 2283900 0 2412700 4346800 3488900 6130900 1721900 2391200 6672600 18238 121 16604 152752;152753;152754;152755;152756;152757;152758;152759;152760;152761 121557;121558;121559;121560;121561;121562;121563 121560 7 GEELSAAAIK Unmodified 987.52368 0.52367535 2760 Q5SW96 LDLRAP1 Low density lipoprotein receptor adapter protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 39.909 40.099 2 0.003098 44568 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 77.732 42.437 82656000 0 0 0 4882600 7102700 8017000 0 5831800 6783900 10367000 9018800 8066200 7360800 5914300 9310900 18239 2760 16605 152762;152763;152764;152765;152766;152767;152768;152769;152770;152771;152772 121564;121565;121566;121567;121568;121569;121570;121571;121572 121570 3 GEELSCEER Unmodified 1107.4503 0.45025241 1312 P31947 SFN 14-3-3 protein sigma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 15.35 15.248 2 2.7522E-05 14253 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 139.88 132.31 599080000 0 12609000 0 59039000 10307000 16525000 18230000 14407000 8534200 25580000 66255000 75538000 29843000 74173000 188040000 18240 1312 16606 152773;152774;152775;152776;152777;152778;152779;152780;152781;152782;152783;152784;152785 121573;121574;121575;121576;121577;121578;121579;121580;121581;121582;121583;121584;121585;121586;121587;121588;121589;121590 121578 17 GEELSCEERNLLSVAYK Unmodified 1995.9572 0.95715549 1312 P31947 SFN 14-3-3 protein sigma yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.29 0.452 5 2 2 3 2 81.808 77.576 2;3 8.8412E-14 93347 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 102.78 89.149 507950000 92841000 356440000 58672000 0 0 0 0 0 0 0 0 0 0 0 0 18241 1312 16607 152786;152787;152788;152789;152790;152791;152792 121591;121592;121593;121594;121595;121596;121597 121593 6 GEELSEANVR Unmodified 1102.5255 0.52546627 2391 Q14203 DCTN1 Dynactin subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 28.196 28.407 2 0.0016798 30647 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 103.56 56.496 105260000 0 0 0 11625000 5151500 0 6300400 5543400 8814700 8485600 9380300 10710000 15067000 10518000 13665000 18242 2391 16608 152793;152794;152795;152796;152797;152798;152799;152800;152801;152802;152803 121598;121599;121600 121598 3 GEELSEANVRLSLLEK Unmodified 1785.9472 0.94724273 2391 Q14203 DCTN1 Dynactin subunit 1 yes yes 0 0 1 By MS/MS 2 0 1 1 82.53 74.4 3 0.013907 97342 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 38.613 20.017 12293000 12293000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18243 2391 16609 152804 121601 121601 1 GEENLMDAQVK Oxidation (M) 1248.5656 0.56561652 1641 P50990 CCT8 T-complex protein 1 subunit theta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.16 3.42 2 4 1 24 2 4 1 2 2 2 2 2 2 2 2 2 2 2 2 32.107 31.759 2 6.7935E-37 28711 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 179.81 126.03 1692500000 186670000 438150000 3210200 73054000 43793000 108060000 71466000 74194000 48704000 103450000 109130000 173240000 81292000 67548000 110530000 18244 1641 16610 152805;152806;152807;152808;152809;152810;152811;152812;152813;152814;152815;152816;152817;152818;152819;152820;152821;152822;152823;152824;152825;152826;152827;152828;152829;152830;152831;152832;152833;152834;152835 121602;121603;121604;121605;121606;121607;121608;121609;121610;121611;121612;121613;121614;121615;121616;121617;121618;121619;121620;121621;121622;121623;121624;121625;121626;121627;121628;121629;121630;121631;121632 121602 2634 23 GEENLMDAQVK Unmodified 1232.5707 0.5707019 1641 P50990 CCT8 T-complex protein 1 subunit theta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.65 3.66 1 3 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 47.879 47.014 2 1.3417E-09 57152 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 166.33 115.72 3399200000 106180000 1811500000 2294700 87502000 63534000 122390000 92862000 90266000 63436000 134210000 181010000 167410000 77588000 112790000 286150000 18245 1641 16610 152836;152837;152838;152839;152840;152841;152842;152843;152844;152845;152846;152847;152848;152849;152850;152851;152852 121633;121634;121635;121636;121637;121638;121639;121640;121641;121642;121643;121644;121645;121646;121647;121648;121649;121650;121651;121652;121653;121654;121655 121648 23 GEETGIDVTLPTGEVTVPGVSGDVSLPEIATGGLEGK Unmodified 3579.8043 0.80433305 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 98.148 92.757 3 1.3766E-107 115904 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.76 111.24 194620000 17330000 177290000 0 0 0 0 0 0 0 0 0 0 0 0 0 18246 2172 16611 152853;152854;152855 121656;121657;121658;121659 121657 4 GEETPVIVGSALCALEGRDPELGLK Unmodified 2609.3371 0.33706714 1572 P49411 TUFM Elongation factor Tu, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 97.583 92.469 3 0.00010923 115704 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.072 39.911 76881000 28030000 45431000 3419800 0 0 0 0 0 0 0 0 0 0 0 0 18247 1572 16612 152856;152857;152858 121660;121661;121662 121661 2 GEEVDVAR Unmodified 873.41921 0.41921028 579 O94760 DDAH1 N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 17.271 17.724 2 0.050305 17062 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.813 16.628 18614000 0 0 0 0 0 0 0 0 0 0 3465700 0 0 3356500 11792000 18248 579 16613 152859;152860;152861 121663 121663 1 GEEVTILAQK Unmodified 1086.5921 0.59208927 2136 Q07157 TJP1 Tight junction protein ZO-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 49.707 48.975 2 0.0083227 62831 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.516 47.442 265450000 0 104000000 0 15001000 12657000 21421000 13170000 7829800 17771000 16307000 14177000 17068000 14762000 11283000 0 18249 2136 16614 152862;152863;152864;152865;152866;152867;152868;152869;152870;152871;152872;152873;152874 121664;121665;121666;121667;121668;121669;121670;121671;121672;121673;121674 121667 4 GEFDPGQDTYQHPPK Unmodified 1714.7587 0.75871368 4061 Q99798 ACO2 Aconitate hydratase, mitochondrial yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 44.54 39.994 3 0.003179 51844 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 52.527 49.966 76294000 0 73500000 2793800 0 0 0 0 0 0 0 0 0 0 0 0 18250 4061 16615 152875;152876 121675 121675 1 GEFETGFEK Unmodified 1042.4607 0.46074075 1014 P15170;Q8IYD1 GSPT1;GSPT2 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A;Eukaryotic peptide chain release factor GTP-binding subunit ERF3B yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 43.852 43.04 2 0.00053306 52636 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 123.72 36.927 4140600000 0 3221400000 39767000 43212000 30088000 67337000 52688000 44480000 34245000 96544000 100330000 87775000 71436000 89540000 161710000 18251 1014 16616 152877;152878;152879;152880;152881;152882;152883;152884;152885;152886;152887;152888;152889;152890;152891 121676;121677;121678;121679;121680;121681;121682;121683;121684;121685;121686;121687;121688;121689;121690;121691;121692;121693 121683 14 GEFGGFGSVSGK Unmodified 1127.5247 0.52473799 2169 Q09028 RBBP4 Histone-binding protein RBBP4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 54.575 53.259 2 2.4911E-05 60038 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 93.096 85.156 2560300000 54329000 1540800000 85742000 36143000 34203000 51063000 47666000 36829000 43148000 61525000 112960000 106050000 74657000 88899000 186300000 18252 2169 16617 152892;152893;152894;152895;152896;152897;152898;152899;152900;152901;152902;152903;152904;152905;152906;152907 121694;121695;121696;121697;121698;121699;121700;121701;121702;121703;121704;121705;121706;121707;121708;121709;121710;121711;121712;121713;121714 121703 20 GEFGGFGSVTGK Unmodified 1141.5404 0.54038805 2615 Q16576 RBBP7 Histone-binding protein RBBP7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 59.824 58.489 2 1.551E-05 74765 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.79 83.347 4143600000 118020000 2551400000 332980000 43320000 44438000 95980000 43329000 49661000 63462000 83624000 134750000 127260000 109740000 101460000 244180000 18253 2615 16618 152908;152909;152910;152911;152912;152913;152914;152915;152916;152917;152918;152919;152920;152921;152922;152923 121715;121716;121717;121718;121719;121720;121721;121722;121723;121724;121725;121726;121727;121728;121729;121730;121731;121732;121733;121734 121719 18 GEFKDEEETVTTK Unmodified 1511.6991 0.69913312 2428 Q14677 CLINT1 Clathrin interactor 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 28.686 28.88 2;3 2.987E-33 30622 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 171.32 158.75 467250000 0 0 0 34757000 23450000 25793000 28597000 29762000 32275000 41938000 47243000 54217000 50301000 32179000 66739000 18254 2428 16619 152924;152925;152926;152927;152928;152929;152930;152931;152932;152933;152934;152935;152936;152937;152938;152939;152940;152941;152942;152943;152944;152945;152946;152947 121735;121736;121737;121738;121739;121740;121741;121742;121743;121744;121745;121746;121747;121748;121749;121750 121746 16 GEFMTCSNDATVR Unmodified 1486.6181 0.6180628 4693 Q9NW82 WDR70 WD repeat-containing protein 70 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.298 42.475 2 6.9507E-08 46962 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 99.283 85.513 62244000 0 0 0 2548100 2630600 2985900 3143200 3022800 2959200 5755200 7003500 5699200 6025200 6693700 13777000 18255 4693 16620 152948;152949;152950;152951;152952;152953;152954;152955;152956;152957;152958;152959 121751;121752;121753;121754;121755;121756;121757;121758;121759;121760;121761;121762 121760 12 GEFMTCSNDATVR Oxidation (M) 1502.613 0.61297742 4693 Q9NW82 WDR70 WD repeat-containing protein 70 yes yes 0 1 0 By matching By MS/MS 10 0 2 1 1 31.693 31.639 2 0.001765 33266 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 57.492 52.879 3998600 0 0 0 0 1455000 0 0 0 0 0 0 0 0 2543600 0 18256 4693 16620 152960;152961 121763 121763 6093 1 GEFMTCSNDATVRTWEVENPK Unmodified 2470.0893 0.089308652 4693 Q9NW82 WDR70 WD repeat-containing protein 70 yes yes 0 0 1 By MS/MS 2 0 1 1 74.064 71.112 3 0.0018353 86945 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 44.089 40.137 3241500 0 0 3241500 0 0 0 0 0 0 0 0 0 0 0 0 18257 4693 16621 152962 121764 121764 1 GEFSASPMLK Oxidation (M) 1081.5114 0.51139611 5066 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 42.364 42.562 2 0.0082763 47212 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 52.255 31.596 32075000 0 0 0 5813500 0 2825500 0 0 3386300 4512900 4307500 5698800 5530400 0 0 18258 5066 16622 152963;152964;152965;152966;152967;152968;152969 121765;121766;121767;121768;121769;121770 121768 6419 6 GEFSASPMLK Unmodified 1065.5165 0.51648149 5066 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 55.158 54.98 2 0.016128 62950 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 49.715 38.304 12835000 0 0 0 0 6194400 0 0 6641000 0 0 0 0 0 0 0 18259 5066 16622 152970;152971;152972 121771;121772 121772 2 GEFTIETEGK Unmodified 1109.5241 0.52406928 1440 P41250 GARS Glycine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.87 3 5 1 1 1 1 1 1 1 1 45.118 43.024 2 1.0724E-23 48951 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 176.44 99.127 1730300000 40325000 1522700000 15036000 0 10696000 20189000 16296000 0 12364000 0 0 0 0 0 92667000 18260 1440 16623 152973;152974;152975;152976;152977;152978;152979;152980 121773;121774;121775;121776;121777;121778;121779;121780;121781;121782;121783 121774 11 GEFTYYEIQDNTGK Unmodified 1663.7366 0.73658126 2627 Q16666 IFI16 Gamma-interferon-inducible protein 16 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 64.267 64.625 2 0.0036242 73360 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.724 30.699 10778000 0 0 0 0 0 0 0 0 0 0 0 0 3041300 0 7737100 18261 2627 16624 152981;152982 121784 121784 1 GEFVTTVQQR Unmodified 1163.5935 0.59348625 1422 P40925 MDH1 Malate dehydrogenase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 2 1 6 2 1 1 1 1 1 1 1 39.7 38.406 2 1.643E-08 42964 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 156.75 119.22 519340000 0 83183000 3287900 10541000 0 0 0 0 0 10870000 75810000 72584000 0 43996000 219060000 18262 1422 16625 152983;152984;152985;152986;152987;152988;152989;152990;152991 121785;121786;121787;121788;121789;121790;121791;121792;121793;121794;121795 121792 11 GEFVTTVQQRGAAVIK Unmodified 1702.9366 0.93661847 1422 P40925 MDH1 Malate dehydrogenase, cytoplasmic yes yes 0 0 1 By MS/MS By MS/MS 2.4 0.49 3 2 3 2 69.744 63.321 2;3 0.0051303 84165 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.709 56.856 141580000 123690000 17892000 0 0 0 0 0 0 0 0 0 0 0 0 0 18263 1422 16626 152992;152993;152994;152995;152996 121796;121797;121798;121799 121799 3 GEGAPGQPAEDSVK Unmodified 1340.6208 0.62082322 3227 Q8IVH2 FOXP4 Forkhead box protein P4 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 13 1 1 2 1 1 1 1 1 1 1 1 1 21.188 21.376 2 0.0045663 22314 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 79.286 60.847 353340000 0 0 0 17058000 17762000 30380000 27356000 27318000 20245000 28820000 34897000 43462000 37815000 31226000 37003000 18264 3227 16627 152997;152998;152999;153000;153001;153002;153003;153004;153005;153006;153007;153008;153009 121800;121801;121802;121803 121802 1 GEGDIHENVDTDLPGSLGQSEEK Unmodified 2425.0881 0.088105904 4956 Q9UK76 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.67 3.89 4 1 4 1 3 1 1 1 1 1 64.689 61.692 2;3 1.2628E-130 78477 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 231.44 210.6 644540000 74135000 428440000 10998000 0 0 0 0 0 0 0 20011000 24744000 0 15874000 70329000 18265 4956 16628 153010;153011;153012;153013;153014;153015;153016;153017;153018 121804;121805;121806;121807;121808;121809;121810;121811;121812;121813 121805 10 GEGDIHENVDTDLPGSLGQSEEKPVPAAPVPSPVAPAPVPSR Unmodified 4212.0975 0.097495383 4956 Q9UK76 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 80.404 80.617 4 3.3357E-09 92940 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 31.531 28.909 17664000 0 0 0 0 0 0 0 0 0 0 6022300 0 0 0 11642000 18266 4956 16629 153019;153020 121814 121814 1 GEGDLSQLSK Unmodified 1032.5088 0.50875357 4786 Q9P013 CWC15 Spliceosome-associated protein CWC15 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 32.441 32.499 2 0.010453 34534 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.95 39.663 63602000 0 0 0 0 7041600 6126300 8203400 15460000 5956600 9533700 0 0 11280000 0 0 18267 4786 16630 153021;153022;153023;153024;153025;153026;153027;153028 121815;121816 121815 2 GEGEQLLGPPNPEGDNPESITSVFITK Unmodified 2824.3767 0.37668335 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.86 3.4 1 1 5 2 1 2 1 1 92.671 91.414 3 1.3869E-39 112714 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.86 91.544 52309000 0 40206000 0 0 0 0 0 0 0 4273600 3359300 0 0 1056600 3413700 18268 5189 16631 153029;153030;153031;153032;153033;153034;153035 121817;121818;121819 121817 3 GEGERPAQNEK Unmodified 1213.5687 0.56872807 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 0 1 By matching By MS/MS 2.6 0.49 2 3 1 4 5.6335 2.2679 2;3 0.0047708 3667 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 91.636 61.066 504210000 287520 503920000 0 0 0 0 0 0 0 0 0 0 0 0 0 18269 1681 16632 153036;153037;153038;153039;153040 121820;121821 121821 1 GEGESPPVNGTDEAAGATGDAIEPAPPSQGAEAK Unmodified 3176.4382 0.43817399 1557 P49006 MARCKSL1 MARCKS-related protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.48 1 2 1 12 3 1 1 1 1 1 1 1 1 1 1 1 1 1 63.153 62.353 3 1.3685E-66 68727 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 97.913 95.718 830360000 64056000 25324000 0 42502000 35255000 35441000 33251000 43646000 30749000 107600000 163090000 91123000 33549000 54117000 70650000 18270 1557 16633 153041;153042;153043;153044;153045;153046;153047;153048;153049;153050;153051;153052;153053;153054;153055;153056 121822;121823;121824;121825;121826;121827;121828;121829;121830;121831;121832;121833;121834;121835;121836;121837;121838 121837 17 GEGGEFSVDR Unmodified 1051.4571 0.45705235 3405 Q8NC51 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 30.821 31.111 2 0.0015959 32502 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 93.649 69.494 73145000 0 0 0 0 6874500 0 5253100 0 0 7639200 13715000 12021000 8234400 8355800 11052000 18271 3405 16634 153057;153058;153059;153060;153061;153062;153063;153064;153065;153066;153067 121839;121840;121841;121842;121843;121844;121845;121846;121847;121848;121849 121845 11 GEGGEFSVDRPIIDR Unmodified 1645.806 0.80599822 3405 Q8NC51 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 0 0 1 By matching By MS/MS By matching By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 60.814 61.072 3 0.020876 69583 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 30.575 16.829 21162000 0 0 0 0 0 0 0 3813200 2640600 3357900 3796800 4424900 0 3128500 0 18272 3405 16635 153068;153069;153070;153071;153072;153073 121850 121850 1 GEGGTDPELEGELDSR Unmodified 1659.7224 0.72238775 4947 Q9UJX6 ANAPC2 Anaphase-promoting complex subunit 2 yes yes 0 0 0 By MS/MS 10 0 1 1 51.399 51.467 2 0.0078059 58215 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 52.463 27.61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18273 4947 16636 153074 121851 121851 1 GEGGTTNPHIFPEGSEPK Unmodified 1852.8592 0.85915601 3840 Q96FW1 OTUB1 Ubiquitin thioesterase OTUB1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 46.713 47.108 3 0.0036408 51908 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 24.029 22.256 20571000 0 0 0 0 0 8750800 0 0 0 0 0 0 0 0 11821000 18274 3840 16637 153075;153076 121852 121852 1 GEGGVEHMECEIK Unmodified 1473.6228 0.62281383 202 O14686 KMT2D Histone-lysine N-methyltransferase 2D yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 36.674 36.83 3 0.046687 40895 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 37.793 32.81 42869000 0 0 0 1901600 2867800 3808200 3940000 3144100 2971200 3528000 0 5323300 5234600 4118500 6031700 18275 202 16638 153077;153078;153079;153080;153081;153082;153083;153084;153085;153086;153087 121853 121853 0 GEGLPNFDNNNIK Unmodified 1430.679 0.6790068 4855 Q9UBS4 DNAJB11 DnaJ homolog subfamily B member 11 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 66.299 60.978 2 9.0062E-09 77875 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.36 92.523 91214000 0 91214000 0 0 0 0 0 0 0 0 0 0 0 0 0 18276 4855 16639 153088;153089 121854 121854 1 GEGLVGDGPVDMR Unmodified 1300.6082 0.60815004 3208 Q86YP4 GATAD2A Transcriptional repressor p66-alpha yes yes 0 0 0 By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 58.003 58.152 2 0.0073082 64998 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.879 32.842 80424000 0 0 0 0 3037700 12368000 0 5020800 5735300 10983000 13679000 0 0 12644000 16958000 18277 3208 16640 153090;153091;153092;153093;153094;153095;153096;153097 121855;121856 121855 2 GEGMPQYRNPFEK Unmodified 1551.714 0.7140121 440 O60884 DNAJA2 DnaJ homolog subfamily A member 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 59.14 59.104 3 0.043594 67155 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 29.324 17.347 19654000 0 0 0 2665900 0 0 0 0 0 0 10701000 0 0 6287100 0 18278 440 16641 153098;153099;153100 121857 121857 1 GEGMSQAATICK Oxidation (M) 1267.5537 0.55367163 1042 P16930 FAH Fumarylacetoacetase yes yes 0 1 0 By matching By MS/MS 2 0 2 1 1 19.064 15.03 2 0.0033975 19900 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.148 61.908 13129000 2850700 10278000 0 0 0 0 0 0 0 0 0 0 0 0 0 18279 1042 16642 153101;153102 121858 121858 1465 1 GEGMSQAATICK Unmodified 1251.5588 0.55875701 1042 P16930 FAH Fumarylacetoacetase yes yes 0 0 0 By MS/MS 2 0 1 1 33.517 28.874 2 3.0775E-05 37676 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.75 114.53 83080000 0 83080000 0 0 0 0 0 0 0 0 0 0 0 0 0 18280 1042 16642 153103 121859 121859 1 GEGPDGDVK Unmodified 872.38758 0.3875758 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 7.421 7.5215 2 0.022744 4995 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.346 16.051 19174000 0 0 0 1549600 2153200 3051900 2439100 0 3312500 0 0 1168500 2471300 1102100 1926200 18281 2172 16643 153104;153105;153106;153107;153108;153109;153110;153111;153112 121860;121861 121860 2 GEGPDVDVNLPK Unmodified 1238.6143 0.61428128 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.53 2.94 1 2 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 60.382 59.415 2 0.00025852 67016 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 96.89 78.11 2022600000 865720 209180000 0 107000000 92029000 102340000 139940000 142900000 117960000 126570000 149750000 197140000 210550000 171020000 255340000 18282 2172 16644 153113;153114;153115;153116;153117;153118;153119;153120;153121;153122;153123;153124;153125;153126;153127 121862;121863;121864;121865;121866;121867;121868;121869;121870;121871;121872;121873;121874;121875;121876;121877;121878;121879;121880;121881;121882;121883;121884;121885;121886;121887 121880 26 GEGPDVDVTLPK Unmodified 1225.619 0.6190323 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 63.804 62.764 2 0.00022953 71087 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 83.862 64.768 351300000 5318500 44526000 0 16110000 15756000 23513000 28406000 27630000 19017000 25015000 28232000 0 35751000 33630000 48396000 18283 2172 16645 153128;153129;153130;153131;153132;153133;153134;153135;153136;153137;153138;153139;153140 121888;121889;121890;121891;121892;121893;121894;121895;121896;121897;121898;121899;121900 121897 12 GEGPDVHMTLPK Unmodified 1279.6231 0.62307182 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 1 1 2 2 1 2 2 2 2 2 2 52.169 52.351 2;3 0.0017544 59558 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 65.278 45.491 486210000 0 0 0 22007000 21669000 26615000 34285000 43831000 19510000 34222000 47104000 49958000 52500000 51181000 83324000 18284 2172 16646 153141;153142;153143;153144;153145;153146;153147;153148;153149;153150;153151;153152;153153;153154;153155;153156;153157;153158;153159;153160;153161 121901;121902;121903;121904;121905;121906;121907;121908;121909;121910;121911;121912;121913;121914 121910 14 GEGPEFDVNLSK Unmodified 1290.6092 0.6091959 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 63.621 62.947 2 2.6951E-05 72229 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 95.483 74.783 442500000 0 103690000 0 0 21156000 25338000 36787000 32478000 23582000 29086000 27256000 38945000 34805000 31877000 37500000 18285 2172 16647 153162;153163;153164;153165;153166;153167;153168;153169;153170;153171;153172;153173;153174 121915;121916;121917;121918;121919;121920;121921;121922;121923;121924;121925;121926;121927;121928;121929;121930;121931 121916 16 GEGPEVDMNLPK Oxidation (M) 1300.5969 0.59691665 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching 10 0 19 1 2 2 2 2 2 2 1 2 2 1 42.179 42.303 2 0.0040111 47472 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 52.167 47.227 156880000 0 0 0 6397200 9912200 15919000 16983000 14472000 15072000 15974000 0 12811000 23891000 14063000 11388000 18286 2172 16648 153175;153176;153177;153178;153179;153180;153181;153182;153183;153184;153185;153186;153187;153188;153189;153190;153191;153192;153193 121932;121933;121934;121935;121936 121935 3505 5 GEGPEVDMNLPK Unmodified 1284.602 0.60200203 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 60.974 60.615 2 0.0057731 69293 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 74.533 58.2 301100000 0 84099000 0 8976200 11091000 12458000 16114000 19944000 13273000 15233000 18780000 21749000 24600000 19636000 35144000 18287 2172 16648 153194;153195;153196;153197;153198;153199;153200;153201;153202;153203;153204;153205;153206 121937;121938;121939;121940;121941;121942 121938 3 GEGPEVDVK Unmodified 928.45018 0.45017606 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 24.201 24.409 2 0.0052332 25971 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 79.474 59.688 274760000 0 0 0 19756000 15363000 18755000 23454000 24182000 24156000 0 20720000 39443000 902420 30237000 57795000 18288 2172 16649 153207;153208;153209;153210;153211;153212;153213;153214;153215;153216;153217 121943;121944;121945;121946;121947;121948;121949;121950;121951 121944 9 GEGPEVDVNLPK Unmodified 1252.6299 0.62993134 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 62.018 60.592 2 4.0402E-06 76405 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.71 94.802 2446500000 23207000 420350000 0 96203000 97111000 126000000 164150000 166470000 128670000 155300000 153560000 213940000 218080000 186440000 296980000 18289 2172 16650 153218;153219;153220;153221;153222;153223;153224;153225;153226;153227;153228;153229;153230;153231;153232;153233 121952;121953;121954;121955;121956;121957;121958;121959;121960;121961;121962;121963;121964;121965;121966;121967;121968;121969;121970;121971;121972;121973;121974;121975 121958 24 GEGPEVDVTLPK Unmodified 1239.6347 0.63468237 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 64.798 64.12 2 0.00035817 73651 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 94.297 82.934 522890000 0 118000000 0 20718000 22518000 28796000 27479000 26470000 22724000 35818000 35832000 51773000 38211000 39335000 55215000 18290 2172 16651 153234;153235;153236;153237;153238;153239;153240;153241;153242;153243;153244;153245;153246;153247 121976;121977;121978;121979;121980;121981;121982;121983;121984;121985;121986;121987;121988;121989 121977 14 GEGPGEAGGPLTPR Unmodified 1293.6313 0.63132832 1628 P50548 ERF ETS domain-containing transcription factor ERF yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 37.195 37.619 2 0.021208 41149 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.659 24.629 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18291 1628 16652 153248;153249;153250 121990;121991;121992 121992 3 GEGQLGPAER Unmodified 1012.4938 0.49377221 980 P13639 EEF2 Elongation factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 19.506 18.706 2 5.0096E-10 18179 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 166.61 131.46 3883300000 80917000 2007100000 17098000 89784000 44518000 78915000 60086000 68240000 43669000 123160000 201300000 219720000 81508000 163920000 603420000 18292 980 16653 153251;153252;153253;153254;153255;153256;153257;153258;153259;153260;153261;153262;153263;153264;153265;153266 121993;121994;121995;121996;121997;121998;121999;122000;122001;122002;122003;122004;122005;122006;122007;122008;122009;122010;122011 122007 17 GEGQLGPAERAK Unmodified 1211.6258 0.62584901 980 P13639 EEF2 Elongation factor 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.33 0.471 8 4 3 6 3 18.341 14.827 2;3 1.7105E-13 18073 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 157.78 137.15 13223000000 1656500000 6315600000 5250700000 0 0 0 0 0 0 0 0 0 0 0 0 18293 980 16654 153267;153268;153269;153270;153271;153272;153273;153274;153275;153276;153277;153278 122012;122013;122014;122015;122016;122017;122018;122019;122020;122021;122022;122023;122024;122025;122026;122027;122028;122029;122030 122016 15 GEGREVDVNLPK Unmodified 1311.6783 0.67827852 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 46.269 41.932 3 0.0073305 52835 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 47.915 34.73 32146000 0 20805000 11341000 0 0 0 0 0 0 0 0 0 0 0 0 18294 2172 16655 153279;153280 122031;122032 122032 2 GEGTEQEPSTTPEADDDGRR Unmodified 2145.9047 0.90466223 2179 Q10570 CPSF1 Cleavage and polyadenylation specificity factor subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.039 20.24 3 8.8017E-59 20500 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 127.22 124.82 110430000 0 0 0 5850300 7283000 10111000 6636700 4675500 7661600 10898000 11968000 8692000 10900000 10583000 15173000 18295 2179 16656 153281;153282;153283;153284;153285;153286;153287;153288;153289;153290;153291;153292 122033;122034;122035;122036;122037;122038;122039;122040;122041;122042;122043;122044;122045 122038 13 GEGTPREEGK Unmodified 1058.4993 0.49925152 3167 Q86VM9 ZC3H18 Zinc finger CCCH domain-containing protein 18 yes yes 0 0 1 By matching By MS/MS 2.33 0.471 2 1 1 2 5.5631 2.2367 2 6.3356E-10 4241 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 172.88 124.32 75834000 7412900 68421000 0 0 0 0 0 0 0 0 0 0 0 0 0 18296 3167 16657 153293;153294;153295 122046;122047 122046 2 GEGVEIVDRDIEVQK Unmodified 1684.8632 0.86317875 3180 Q86W92 PPFIBP1 Liprin-beta-1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 3 24 1 1 1 2 2 2 2 2 2 2 2 2 2 2 2 60.056 59.709 2;3 3.3348E-23 68403 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 110.55 89.455 933140000 19935000 94414 5869700 38396000 42630000 69142000 60767000 54411000 64737000 90551000 126000000 104350000 75674000 63198000 117380000 18297 3180 16658 153296;153297;153298;153299;153300;153301;153302;153303;153304;153305;153306;153307;153308;153309;153310;153311;153312;153313;153314;153315;153316;153317;153318;153319;153320;153321;153322 122048;122049;122050;122051;122052;122053;122054;122055;122056;122057;122058;122059;122060;122061;122062;122063;122064;122065;122066;122067 122063 19 GEGVSTVGYR Unmodified 1023.4985 0.49852324 4789 Q9P031 CCDC59 Thyroid transcription factor 1-associated protein 26 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 27.828 28.014 2 0.0040383 30095 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 74.301 50.098 49250000 0 0 0 4679800 4142300 4503100 3321600 0 4055100 4822800 6516700 7022800 0 4678400 5507400 18298 4789 16659 153323;153324;153325;153326;153327;153328;153329;153330;153331;153332 122068;122069;122070;122071;122072;122073;122074;122075;122076 122069 8 GEHPEGDPGEVPAPSPQER Unmodified 1983.8922 0.89224705 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching 10 0 5 1 1 1 1 1 35.929 36.142 3 0.0061443 39379 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 31.233 23.012 19011000 0 0 0 0 0 2741300 0 0 2591200 3579500 5559100 0 0 4539800 0 18299 645 16660 153333;153334;153335;153336;153337 122077 122077 1 GEHPEGDPGEVPAPSPQERGEHLNTEQSHEVQPGVPPPPLPK Unmodified 4452.1371 0.13706879 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 0 1 By MS/MS 2 0 2 2 68.404 64.681 5;6 0.00063578 80160 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 21.775 17.817 5684200 0 0 5684200 0 0 0 0 0 0 0 0 0 0 0 0 18300 645 16661 153338;153339 122078;122079 122079 2 GEHPGLSIGDVAK Unmodified 1278.6568 0.65681479 883 P09429;B2RPK0 HMGB1;HMGB1P1 High mobility group protein B1;Putative high mobility group protein B1-like 1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.27 3.72 1 8 4 24 5 5 3 2 2 2 2 2 2 2 2 2 2 2 2 51.974 50.436 2;3 1.2048E-29 67551 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 196.11 167.94 22389000000 1308400000 8913700000 6837600000 297230000 320360000 272850000 319290000 375890000 268080000 523110000 797510000 478370000 389180000 353360000 934290000 18301 883 16662 153340;153341;153342;153343;153344;153345;153346;153347;153348;153349;153350;153351;153352;153353;153354;153355;153356;153357;153358;153359;153360;153361;153362;153363;153364;153365;153366;153367;153368;153369;153370;153371;153372;153373;153374;153375;153376 122080;122081;122082;122083;122084;122085;122086;122087;122088;122089;122090;122091;122092;122093;122094;122095;122096;122097;122098;122099;122100;122101;122102;122103;122104;122105;122106;122107;122108;122109;122110;122111;122112;122113;122114;122115;122116;122117;122118;122119;122120;122121;122122;122123;122124;122125;122126;122127;122128;122129;122130;122131;122132;122133;122134;122135;122136 122112 53 GEHPGLSIGDVAKK Unmodified 1406.7518 0.75177781 883 P09429;B2RPK0 HMGB1;HMGB1P1 High mobility group protein B1;Putative high mobility group protein B1-like 1 yes no 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 47.642 41.784 3 8.9832E-10 58376 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.552 69.928 27130000 25426000 0 1704100 0 0 0 0 0 0 0 0 0 0 0 0 18302 883 16663 153377;153378 122137;122138;122139 122138 3 GEHSIVYLK Unmodified 1044.5604 0.56039521 2080 Q02790 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.76 3.89 1 4 2 10 3 3 1 1 1 1 1 1 1 1 2 1 44.134 42.708 2 4.3144E-42 53736 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 214.32 166.47 1462900000 676930000 118140000 426460000 0 4807000 20163000 5893300 0 5793500 24488000 40148000 38677000 0 36664000 64785000 18303 2080 16664 153379;153380;153381;153382;153383;153384;153385;153386;153387;153388;153389;153390;153391;153392;153393;153394;153395 122140;122141;122142;122143;122144;122145;122146;122147;122148;122149;122150;122151;122152;122153;122154;122155;122156;122157;122158;122159;122160;122161 122151 17 GEHVPGFCLPK Unmodified 1239.607 0.60702783 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.41 3.11 4 2 23 2 2 2 2 2 2 2 2 2 2 2 2 1 2 2 63.097 62.096 2;3 0.0038797 86366 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.374 64.374 1273400000 567070000 162800000 132180000 19934000 18836000 39023000 29974000 26248000 22229000 43199000 36299000 48679000 5910400 57249000 63784000 18304 3641 16665 153396;153397;153398;153399;153400;153401;153402;153403;153404;153405;153406;153407;153408;153409;153410;153411;153412;153413;153414;153415;153416;153417;153418;153419;153420;153421;153422;153423;153424 122162;122163;122164;122165;122166;122167;122168;122169;122170;122171;122172;122173;122174;122175;122176;122177;122178 122169 11 GEIAEAYADLVK Unmodified 1277.6503 0.65033243 1670 P51784 USP11 Ubiquitin carboxyl-terminal hydrolase 11 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 80.401 76.864 2 0.0060294 95468 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.102 65.428 75021000 0 71853000 3168400 0 0 0 0 0 0 0 0 0 0 0 0 18305 1670 16666 153425;153426;153427 122179;122180 122179 2 GEIAGPPDTPYEGGR Unmodified 1514.7001 0.70013617 1832 P61086 UBE2K Ubiquitin-conjugating enzyme E2 K yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 48.242 48.69 2 0.0064901 54041 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.57 44.632 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18306 1832 16667 153428;153429 122181;122182 122182 2 GEIDAHEDSFK Unmodified 1246.5466 0.54659564 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.86 3.47 6 2 21 2 4 2 2 2 2 1 2 2 2 2 2 2 2 29.784 28.677 2;3 7.0627E-12 37434 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 159.79 122.23 1160800000 47618000 795750000 13855000 0 12674000 26963000 13995000 10012000 11315000 33941000 41562000 38580000 23070000 28686000 62774000 18307 2344 16668 153430;153431;153432;153433;153434;153435;153436;153437;153438;153439;153440;153441;153442;153443;153444;153445;153446;153447;153448;153449;153450;153451;153452;153453;153454;153455;153456;153457;153458 122183;122184;122185;122186;122187;122188;122189;122190;122191;122192;122193;122194;122195;122196;122197 122187 5 GEIDASVPELEGDLRGPQVDVK Unmodified 2322.1703 0.17031939 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81.075 80.167 3 2.0022E-06 100435 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.76 59.671 156950000 23412000 17834000 6184400 0 1879900 4806500 1802800 9939500 6382000 15103000 10092000 13926000 4428800 6885300 34271000 18308 2172 16669 153459;153460;153461;153462;153463;153464;153465;153466;153467;153468;153469;153470;153471;153472 122198;122199;122200;122201;122202;122203;122204;122205;122206 122202 9 GEIEIESDAPMK Oxidation (M) 1333.6071 0.60714699 3631 Q92576 PHF3 PHD finger protein 3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 2 1 1 1 1 1 41.194 41.471 2 0.0040596 45973 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 51.927 45.031 30979000 0 0 0 0 4131500 0 2571500 0 4804100 0 6660800 5877000 0 0 6934500 18309 3631 16670 153473;153474;153475;153476;153477;153478;153479;153480;153481 122207;122208;122209;122210;122211;122212;122213 122209 5127 7 GEIFELK Unmodified 834.44872 0.4487195 2178;1937 P63010;Q10567 AP2B1;AP1B1 AP-2 complex subunit beta;AP-1 complex subunit beta-1 no no 0 0 0 By matching By MS/MS 2 0 3 1 2 63.072 56.384 2 0.047334 72330 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.748 0 281140000 5795000 275340000 0 0 0 0 0 0 0 0 0 0 0 0 0 18310 1937;2178 16671 153482;153483;153484 122214 122214 1 GEIGDATPFNDAVNVQK Unmodified 1773.8533 0.85334235 1291 P30876 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 69.578 68.926 2 3.5338E-46 78651 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 156.36 132.61 485120000 0 351700000 0 6022300 6626900 10093000 7128200 7648300 6937300 11618000 13609000 15367000 12159000 13104000 23111000 18311 1291 16672 153485;153486;153487;153488;153489;153490;153491;153492;153493;153494;153495;153496;153497;153498 122215;122216;122217;122218;122219;122220;122221;122222;122223;122224;122225;122226;122227;122228 122219 14 GEIGDPQTENPSTR Unmodified 1499.6852 0.68521439 2776 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 27.955 28.193 2 0.00069093 30393 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 77.64 62.375 61794000 0 0 0 0 9401100 9291800 4455600 5233500 7127100 0 9473000 6032700 4865700 0 5913400 18312 2776 16673 153499;153500;153501;153502;153503;153504;153505;153506;153507;153508 122229;122230;122231;122232;122233;122234;122235;122236;122237 122229 9 GEILIGGQSVTMGYYK Oxidation (M) 1730.8549 0.85492225 670 O95573 ACSL3 Long-chain-fatty-acid--CoA ligase 3 yes yes 0 1 0 By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 73.35 73.326 2 1.4877E-07 84506 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 85.288 50.91 53364000 0 0 0 3466300 7000000 5610200 3459400 7292500 0 10975000 10446000 0 5113900 0 0 18313 670 16674 153509;153510;153511;153512;153513;153514;153515;153516;153517 122238;122239;122240 122238 813 3 GEILLEEEK Unmodified 1058.5496 0.54955575 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 48.98 48.274 2 0.00053306 62140 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.72 48.508 303740000 0 78400000 0 20251000 17284000 21383000 17974000 19579000 14934000 20192000 0 27779000 25362000 20422000 20182000 18314 2804 16675 153518;153519;153520;153521;153522;153523;153524;153525;153526;153527;153528;153529;153530 122241;122242;122243;122244;122245;122246;122247;122248;122249;122250;122251;122252;122253;122254;122255;122256 122246 15 GEIPEVAFMK Unmodified 1119.5634 0.56343168 4861 Q9UBU9 NXF1 Nuclear RNA export factor 1 yes yes 0 0 0 By MS/MS 2 0 1 1 81.709 77.004 2 0.0029186 95768 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.442 81.622 68887000 0 68887000 0 0 0 0 0 0 0 0 0 0 0 0 0 18315 4861 16676 153531 122257 122257 1 GEIPWSQELRPEAK Unmodified 1638.8366 0.83657007 292 O15530 PDPK1 3-phosphoinositide-dependent protein kinase 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 73.982 69.969 3 0.0013531 88064 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.956 54.435 51545000 0 36785000 14760000 0 0 0 0 0 0 0 0 0 0 0 0 18316 292 16677 153532;153533 122258;122259;122260 122259 3 GEISATQDVMMEEIFR 2 Oxidation (M) 1886.839 0.83901419 2348 Q13867 BLMH Bleomycin hydrolase yes yes 0 2 0 By MS/MS 10 0 1 1 72.134 71.532 2 0.00072199 82778 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 48.568 40.464 12847000 0 0 0 12847000 0 0 0 0 0 0 0 0 0 0 0 18317 2348 16678 153534 122261 122261 3832;3833 1 GEITGEVHMPSGK Oxidation (M) 1356.6344 0.63436479 487 O75369 FLNB Filamin-B yes yes 0 1 0 By MS/MS By matching 2.4 0.49 3 2 4 1 27.422 23.399 2;3 0.0044794 29026 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 52.265 39.911 227610000 0 225810000 1806200 0 0 0 0 0 0 0 0 0 0 0 0 18318 487 16679 153535;153536;153537;153538;153539 122262;122263;122264;122265 122264 616 2 GEITGEVHMPSGK Unmodified 1340.6395 0.63945017 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.08 3.33 2 1 9 2 1 1 1 1 1 1 1 1 1 1 43.444 42.494 3 0.0014874 56179 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.196 47.011 377140000 0 264100000 23540000 0 0 9990300 4186700 0 2542900 8067700 11097000 11694000 6979500 9264100 25682000 18319 487 16679 153540;153541;153542;153543;153544;153545;153546;153547;153548;153549;153550;153551 122266;122267;122268;122269 122267 3 GEITPAAIQK Unmodified 1026.571 0.5709599 2544 Q15532 SS18 Protein SSXT yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 38.985 38.233 2 0.0036745 48229 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.267 48.186 640780000 0 428110000 1227400 11160000 12946000 13064000 12426000 12005000 9662700 18445000 27117000 26400000 15276000 17006000 35940000 18320 2544 16680 153552;153553;153554;153555;153556;153557;153558;153559;153560;153561;153562;153563;153564;153565;153566 122270;122271;122272;122273;122274;122275;122276 122272 4 GELDLSLENLDLSK Unmodified 1544.7934 0.79336785 2063 Q01804 OTUD4 OTU domain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 88.761 86.366 2 0.00020909 100552 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 80.979 62.92 22664000 0 20042000 0 0 0 0 0 0 0 2621600 0 0 0 0 0 18321 2063 16682 153567;153568;153569 122277;122278;122279 122277 3 GELEASQQQVEVYK Unmodified 1606.7839 0.7838658 3242 Q8IWJ2 GCC2 GRIP and coiled-coil domain-containing protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 52.976 47.184 2 5.373E-05 61070 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.752 84.38 45255000 0 45255000 0 0 0 0 0 0 0 0 0 0 0 0 0 18322 3242 16683 153570 122280 122280 1 GELEVLLEAAIDLSK Unmodified 1598.8767 0.87670355 3701 Q93008 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.21 0.558 1 9 4 7 4 3 103.44 99.528 2;3 2.0898E-23 120364 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.943 92.39 103670000 84681000 12288000 6696000 0 0 0 0 0 0 0 0 0 0 0 0 18323 3701 16684 153571;153572;153573;153574;153575;153576;153577;153578;153579;153580;153581;153582;153583;153584 122281;122282;122283;122284;122285;122286;122287;122288;122289;122290 122287 9 GELFDYLTEK Unmodified 1213.5867 0.58666954 1025 P15735;Q16816 PHKG2;PHKG1 Phosphorylase b kinase gamma catalytic chain, liver/testis isoform;Phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform yes no 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 84.471 80.854 2 0.0058019 100599 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.25 56.438 46605000 0 38103000 8501800 0 0 0 0 0 0 0 0 0 0 0 0 18324 1025 16685 153585;153586 122291;122292 122291 2 GELGMSPPGSKIPK Oxidation (M) 1412.7334 0.73335055 2445 Q14781 CBX2 Chromobox protein homolog 2 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 80.49 80.646 2 0.043475 93646 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 43.308 19.988 67362000 0 0 0 0 0 0 0 3314500 4484900 16327000 8668300 10208000 4980200 6269300 13110000 18325 2445 16686 153587;153588;153589;153590;153591;153592;153593;153594 122293 122293 0 GELIHVFNK Unmodified 1055.5764 0.57637963 4334 Q9H0P0 NT5C3A Cytosolic 5'-nucleotidase 3A yes yes 0 0 0 By MS/MS 10 0 1 1 52.01 52.687 2 0.013257 58803 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.074 30.714 32926000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32926000 18326 4334 16687 153595 122294 122294 1 GELKLADFGLAR Unmodified 1288.7139 0.71393574 2037;2132 Q00536;Q07002 CDK16;CDK18 Cyclin-dependent kinase 16;Cyclin-dependent kinase 18 no no 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 2 1 2 2 2 56.925 57.257 3 0.000107 64810 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 67.08 38.176 135640000 0 0 0 0 0 13241000 12150000 0 10514000 0 15041000 25211000 0 19979000 39510000 18327 2037;2132 16688 153596;153597;153598;153599;153600;153601;153602;153603;153604;153605;153606 122295;122296;122297;122298 122298 4 GELLEAIK Unmodified 871.50148 0.50148335 776 P04179 SOD2 Superoxide dismutase [Mn], mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 65.282 59.291 2 0.046406 76340 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.981 0 113770000 7708900 96169000 9896100 0 0 0 0 0 0 0 0 0 0 0 0 18328 776 16689 153607;153608;153609 122299 122299 1 GELLLQLCR Unmodified 1100.6012 0.60121417 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 76.571 76.743 2 0.0032202 88476 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 129.4 100.89 544420000 0 0 0 0 0 0 27410000 18832000 63873000 122360000 136220000 175720000 0 0 0 18329 4226 16690 153610;153611;153612;153613;153614;153615 122300;122301;122302;122303;122304;122305;122306;122307;122308 122308 9 GELPDFQDGTK Unmodified 1205.5564 0.55643205 123 O00170 AIP AH receptor-interacting protein yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 52.307 52.61 2 0.00605 58474 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.532 42.667 11599000 0 0 0 0 0 0 2604300 2332000 0 0 0 0 0 0 6662300 18330 123 16691 153616;153617;153618 122309 122309 1 GELPLDYVVSPQIK Unmodified 1556.845 0.84500949 4098 Q9BQI6 ANKRD32 Ankyrin repeat domain-containing protein 32 yes yes 0 0 0 By MS/MS 2 0 1 1 90.382 85.486 2 0.00081975 106315 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.653 70.366 15694000 0 15694000 0 0 0 0 0 0 0 0 0 0 0 0 0 18331 4098 16692 153619 122310 122310 1 GELQNWPDLLPK Unmodified 1408.7351 0.73506511 3692 Q92973 TNPO1 Transportin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 87.725 86.641 2 9.0686E-05 108616 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.18 87.846 732960000 11131000 632720000 6831000 0 0 6647000 2273300 5066900 4516800 8094700 7406800 7791800 4870300 6631400 28974000 18332 3692 16693 153620;153621;153622;153623;153624;153625;153626;153627;153628;153629;153630;153631;153632 122311;122312;122313;122314;122315;122316;122317;122318;122319;122320 122313 6 GELSREICLQSQSK Unmodified 1633.8094 0.80936904 4577 Q9NQW6 ANLN Actin-binding protein anillin yes yes 0 0 1 By MS/MS 2 0 1 1 53.244 45.181 3 2.1637E-06 62135 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.946 66.807 35442000 35442000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18333 4577 16694 153633 122321;122322 122322 2 GELSVGQLLK Unmodified 1042.6023 0.60226003 3592 Q8WXI4 ACOT11 Acyl-coenzyme A thioesterase 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 75.447 75.473 2 0.0077624 86989 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 61.679 17.33 59265000 0 0 0 2897000 5557200 5710600 5730800 5936300 8196200 5554200 7192900 11564000 926440 0 0 18334 3592 16695 153634;153635;153636;153637;153638;153639;153640;153641;153642;153643 122323;122324;122325;122326;122327;122328;122329;122330;122331 122324 9 GELTQEEK Unmodified 932.44509 0.44509068 3221 Q8IV38 ANKMY2 Ankyrin repeat and MYND domain-containing protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 11.188 7.91 2 0.033899 11001 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.21 54.082 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18335 3221 16696 153644 122332 122332 1 GELVGGLDIVK Unmodified 1098.6285 0.62847478 570 O76003 GLRX3 Glutaredoxin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 76.436 75.303 2 0.00039146 86813 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 86.898 57.231 2587100000 116900000 1906000000 70146000 12378000 12967000 63950000 28188000 26336000 27602000 56653000 47080000 51888000 23705000 36984000 106400000 18336 570 16697 153645;153646;153647;153648;153649;153650;153651;153652;153653;153654;153655;153656;153657;153658;153659;153660 122333;122334;122335;122336;122337;122338;122339;122340;122341;122342;122343;122344;122345;122346;122347;122348;122349 122335 17 GELVTNCFK Unmodified 1066.5117 0.51173046 2328 Q13616 CUL1 Cullin-1 yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 50.666 45.835 2 0.0055016 59781 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.01 65.198 225370000 0 222260000 3108200 0 0 0 0 0 0 0 0 0 0 0 0 18337 2328 16698 153661;153662 122350 122350 1 GELYQWK Unmodified 922.45487 0.45486751 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 0 0 By MS/MS 2 0 1 1 55.821 50.006 2 0.039683 64524 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.1 56.901 31005000 0 31005000 0 0 0 0 0 0 0 0 0 0 0 0 0 18338 619 16699 153663 122351 122351 1 GEMETESQPK Oxidation (M) 1150.4812 0.48121819 3077 Q7Z309 FAM122B Protein FAM122B yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 6.0788 6.1819 2 0.00077259 3452 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 109.11 90.707 64642000 0 0 0 2882400 3850100 6924100 4361300 2483700 6356500 8207800 0 7038900 7570600 6784400 8182000 18339 3077 16700 153664;153665;153666;153667;153668;153669;153670;153671;153672;153673;153674 122352;122353;122354;122355;122356;122357;122358;122359;122360 122355 4689 9 GEMETESQPK Unmodified 1134.4863 0.48630357 3077 Q7Z309 FAM122B Protein FAM122B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 10.79 10.629 2 0.0061036 9896 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.27 57.507 75156000 0 6138000 0 0 3637100 8936800 6247900 4781700 7001700 8298000 8150600 0 7833700 980420 13150000 18340 3077 16700 153675;153676;153677;153678;153679;153680;153681;153682;153683;153684;153685;153686 122361;122362;122363;122364;122365;122366;122367;122368;122369 122361 8 GEMMDLQHGSLFLQTPK 2 Oxidation (M) 1962.9179 0.91793321 836 P07195 LDHB L-lactate dehydrogenase B chain yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.81 3.89 11 3 12 2 6 6 1 1 1 1 1 1 2 1 1 2 70.682 68.896 2;3 6.6482E-42 76815 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 149.3 117.82 9326700000 1845600000 4251800000 2078600000 10186000 0 33309000 20335000 20441000 0 32246000 241350000 167930000 23230000 119550000 482160000 18341 836 16701 153687;153688;153689;153690;153691;153692;153693;153694;153695;153696;153697;153698;153699;153700;153701;153702;153703;153704;153705;153706;153707;153708;153709;153710;153711;153712 122370;122371;122372;122373;122374;122375;122376;122377;122378;122379;122380;122381;122382;122383;122384;122385;122386;122387;122388;122389;122390;122391;122392;122393;122394;122395;122396;122397;122398;122399;122400 122377 1019;1020 28 GEMMDLQHGSLFLQTPK Oxidation (M) 1946.923 0.92301859 836 P07195 LDHB L-lactate dehydrogenase B chain yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6 3.91 1 13 5 18 7 8 4 1 1 1 1 1 3 3 3 4 79.077 77.023 2;3 9.7684E-59 96927 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 159.31 143.19 11066000000 3193000000 5216000000 1678600000 0 2212000 8219900 4761000 7941300 0 9402100 117990000 101210000 0 95415000 630790000 18342 836 16701 153713;153714;153715;153716;153717;153718;153719;153720;153721;153722;153723;153724;153725;153726;153727;153728;153729;153730;153731;153732;153733;153734;153735;153736;153737;153738;153739;153740;153741;153742;153743;153744;153745;153746;153747;153748;153749 122401;122402;122403;122404;122405;122406;122407;122408;122409;122410;122411;122412;122413;122414;122415;122416;122417;122418;122419;122420;122421;122422;122423;122424;122425;122426;122427;122428;122429;122430;122431;122432;122433;122434;122435;122436;122437;122438 122420 1019;1020 32 GEMMDLQHGSLFLQTPK Unmodified 1930.9281 0.92810397 836 P07195 LDHB L-lactate dehydrogenase B chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.56 3.67 10 1 5 5 5 1 1 1 1 2 85.938 82.122 2;3 1.91E-46 103479 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 134.85 129.75 6085000000 2699500000 3014000000 160320000 0 0 0 0 0 0 0 7146900 5982100 0 6311600 191770000 18343 836 16701 153750;153751;153752;153753;153754;153755;153756;153757;153758;153759;153760;153761;153762;153763;153764;153765 122439;122440;122441;122442;122443;122444;122445;122446;122447;122448;122449;122450;122451;122452;122453;122454;122455 122449 14 GEMMDLQHGSLFLR 2 Oxidation (M) 1664.7651 0.76506139 719 P00338 LDHA L-lactate dehydrogenase A chain yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 2 1 1 2 2 1 2 2 62.609 62.77 2;3 1.1321E-08 71757 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 95.651 88.964 902720000 0 0 0 22705000 11681000 29148000 0 16420000 0 15581000 170010000 102100000 18438000 89382000 427250000 18344 719 16702 153766;153767;153768;153769;153770;153771;153772;153773;153774;153775;153776;153777;153778;153779;153780 122456;122457;122458;122459;122460;122461;122462;122463;122464;122465 122459 861;862 10 GEMMDLQHGSLFLR Oxidation (M) 1648.7701 0.77014677 719 P00338 LDHA L-lactate dehydrogenase A chain yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 2 2 1 2 3 73.873 74.085 2;3 1.8737E-12 84824 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 102.73 92.242 435750000 0 0 0 0 0 3900200 2022200 0 0 0 38133000 31258000 4209100 36217000 320010000 18345 719 16702 153781;153782;153783;153784;153785;153786;153787;153788;153789;153790;153791;153792 122466;122467;122468;122469;122470;122471;122472;122473;122474 122472 861;862 8 GEMMDLQHGSLFLR Unmodified 1632.7752 0.77523214 719 P00338 LDHA L-lactate dehydrogenase A chain yes yes 0 0 0 By MS/MS 10 0 1 1 79.691 79.921 2 0.0019303 91983 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.6 47.629 21788000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21788000 18346 719 16702 153793 122475 122475 1 GEMTALREELK Unmodified 1275.6493 0.64928657 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 49.886 49.928 3 0.0042344 56457 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 52.391 39.775 60904000 0 0 0 3743700 3962100 9173000 0 9739700 5438700 6583300 0 0 0 6015900 16248000 18347 2392 16703 153794;153795;153796;153797;153798;153799;153800;153801 122476;122477;122478;122479 122476 4 GENHLTVTWK Unmodified 1183.5986 0.59857163 3038 Q7KZ85 SUPT6H Transcription elongation factor SPT6 yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 53.686 46.975 2;3 0.0026726 64689 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 102.06 71.807 47958000 41146000 0 6812600 0 0 0 0 0 0 0 0 0 0 0 0 18348 3038 16704 153802;153803;153804 122480;122481;122482;122483 122480 4 GENIEDIPK Unmodified 1013.5029 0.50293991 3185 Q86WR0 CCDC25 Coiled-coil domain-containing protein 25 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 41.712 39.508 2 0.0052023 43756 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.438 66.281 132480000 17190000 91795000 0 0 0 6534200 0 0 0 0 0 0 0 3669700 13286000 18349 3185 16705 153805;153806;153807;153808;153809;153810 122484;122485;122486;122487;122488;122489 122487 5 GENLVSMTVEGPPPK Oxidation (M) 1569.7709 0.77085827 1005 P63162;P14678 SNRPN;SNRPB Small nuclear ribonucleoprotein-associated protein N;Small nuclear ribonucleoprotein-associated proteins B and B' yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 2 1 1 1 1 1 1 2 2 1 2 52.846 53.068 2 7.2203E-06 59752 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 80.318 65.652 217830000 0 0 0 15077000 11650000 9091800 15859000 19077000 7096600 13487000 12267000 28826000 34430000 15656000 35313000 18350 1005 16706 153811;153812;153813;153814;153815;153816;153817;153818;153819;153820;153821;153822;153823;153824;153825;153826 122490;122491;122492;122493;122494;122495;122496;122497;122498;122499;122500;122501;122502;122503;122504 122501 1371 15 GENLVSMTVEGPPPK Unmodified 1553.7759 0.77594365 1005 P63162;P14678 SNRPN;SNRPB Small nuclear ribonucleoprotein-associated protein N;Small nuclear ribonucleoprotein-associated proteins B and B' yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 2 1 1 1 1 1 1 68.656 68.742 2 3.599E-07 79462 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 95.401 88.741 113190000 0 0 0 7012100 7395500 5702800 7919700 6139300 7868600 9330300 10770000 14203000 6082700 10285000 20478000 18351 1005 16706 153827;153828;153829;153830;153831;153832;153833;153834;153835;153836;153837;153838;153839 122505;122506;122507;122508;122509;122510;122511;122512;122513;122514;122515;122516;122517;122518;122519;122520;122521;122522;122523;122524;122525;122526;122527;122528 122519 23 GENPFEIQDHSQDQQIEGDEEDEEK Unmodified 2944.2119 0.21186245 2721 Q5BKZ1 ZNF326 DBIRD complex subunit ZNF326 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 60.34 60.406 3 9.7207E-15 68196 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.853 66.791 48924000 0 0 0 3561200 4521500 0 2691200 0 0 6609900 0 8379500 7637900 5203300 10319000 18352 2721 16707 153840;153841;153842;153843;153844;153845;153846;153847 122529;122530;122531;122532;122533;122534 122529 6 GENPFTDSPEEEK Unmodified 1477.6209 0.6208828 5011 Q9ULX6 AKAP8L A-kinase anchor protein 8-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43.587 42.788 2 2.103E-20 48398 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 157.38 150.1 285520000 6215700 52550000 0 23025000 10596000 18696000 13861000 11335000 11974000 22034000 23317000 26232000 26134000 16687000 22864000 18353 5011 16708 153848;153849;153850;153851;153852;153853;153854;153855;153856;153857;153858;153859;153860;153861 122535;122536;122537;122538;122539;122540;122541;122542;122543;122544;122545;122546;122547;122548 122535 14 GENSWFSTQVDTVATK Unmodified 1768.8268 0.82679325 860 P08195 SLC3A2 4F2 cell-surface antigen heavy chain yes yes 0 0 0 By MS/MS 10 0 1 1 75.917 76.128 2 0.027997 87942 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 61.423 48.655 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18354 860 16709 153862 122549 122549 1 GENVTVENQPR Unmodified 1241.6 0.60002819 3733 Q96A65 EXOC4 Exocyst complex component 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 21.096 21.264 2 0.00087155 22250 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 87.913 71.281 63922000 0 0 0 4851000 3632100 6429800 5941100 5987000 0 7419300 6306900 0 6248800 7054600 10051000 18355 3733 16710 153863;153864;153865;153866;153867;153868;153869;153870;153871;153872 122550;122551;122552;122553;122554;122555;122556;122557;122558;122559;122560 122550 11 GEPAAAAAPEAGASPVEK Unmodified 1621.7948 0.79476484 1256 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.62 3.03 1 3 1 24 2 2 1 2 2 2 2 2 2 2 2 2 2 2 2 41.126 40.764 2;3 2.0503E-37 42802 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 127.71 120.07 4014000000 556740000 63294000 3065000 201740000 181880000 151070000 189730000 196380000 145590000 340370000 667550000 437060000 234420000 240240000 404860000 18356 1256 16711 153873;153874;153875;153876;153877;153878;153879;153880;153881;153882;153883;153884;153885;153886;153887;153888;153889;153890;153891;153892;153893;153894;153895;153896;153897;153898;153899;153900;153901 122561;122562;122563;122564;122565;122566;122567;122568;122569;122570;122571;122572;122573;122574;122575;122576;122577;122578;122579;122580;122581;122582;122583;122584;122585;122586;122587;122588;122589 122576 26 GEPGAAPLSAPAFSLVFPFLK Unmodified 2115.1405 0.14046323 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS 2 0 1 1 104.11 99.368 2 0.034011 122755 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 31.827 24.946 2494900 0 2494900 0 0 0 0 0 0 0 0 0 0 0 0 0 18357 3641 16712 153902 122590 122590 1 GEPGPNDVR Unmodified 939.44101 0.44100836 2961 Q6PKG0 LARP1 La-related protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 15.981 16.087 2 0.042904 15729 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 43.808 18.809 47350000 0 0 0 3591100 2487400 3738600 3999200 0 2652400 5072800 7374500 0 7987100 10447000 0 18358 2961 16713 153903;153904;153905;153906;153907;153908;153909;153910;153911 122591;122592 122591 2 GEPGPNDVRGGEPDGSAR Unmodified 1765.798 0.79795273 2961 Q6PKG0 LARP1 La-related protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 24.508 24.618 3 0.0011019 26497 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 46.621 44.798 98538000 0 0 0 11582000 8102600 9076000 11612000 5708200 7186700 7976800 11093000 0 13232000 12968000 0 18359 2961 16714 153912;153913;153914;153915;153916;153917;153918;153919;153920;153921 122593;122594;122595;122596;122597;122598;122599;122600;122601 122601 8 GEPGVEPGHFGVCVDSLTSDK Unmodified 2185.995 0.99499756 2295 Q13459 MYO9B Unconventional myosin-IXb yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 78.361 74.284 3 0.00011389 92641 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.735 51.688 46078000 0 46078000 0 0 0 0 0 0 0 0 0 0 0 0 0 18360 2295 16715 153922;153923 122602;122603 122602 2 GEPGWVTIHGMAGCGK Unmodified 1655.7548 0.75483105 204 O14727 APAF1 Apoptotic protease-activating factor 1 yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 71.353 65.414 3 0.013211 86796 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 34.498 23.71 15709000 14649000 0 1060800 0 0 0 0 0 0 0 0 0 0 0 0 18361 204 16716 153924;153925 122604 122604 1 GEPLHIINSSNVTDEPLLK Unmodified 2075.0899 0.089884225 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 78.421 78.223 3 0.00097644 94107 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 45.608 37.008 310380000 0 3546300 0 5630700 12892000 21987000 12061000 31106000 31128000 39415000 27606000 35764000 20258000 27947000 41042000 18362 3023 16717 153926;153927;153928;153929;153930;153931;153932;153933;153934;153935;153936;153937;153938 122605;122606;122607;122608;122609 122608 5 GEPPLPEEDLSK Unmodified 1309.6402 0.64016167 279 O15372 EIF3H Eukaryotic translation initiation factor 3 subunit H yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 2 1 1 1 54.111 54.201 2 0.0061623 61319 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.927 28.855 71989000 0 0 0 6672500 3703800 6148900 6318200 4273800 3569800 7837500 9395100 7259900 8365700 8443700 0 18363 279 16718 153939;153940;153941;153942;153943;153944;153945;153946;153947;153948;153949;153950 122610;122611;122612;122613;122614;122615;122616;122617;122618;122619;122620 122610 11 GEPPNSDMHPMR Unmodified 1366.5758 0.57580405 4811 Q9P289 STK26 Serine/threonine-protein kinase 26 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 22.852 23.057 3 0.021414 24102 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 36.284 30.442 39815000 0 0 0 0 1789900 4746700 3265200 3751700 0 4439800 0 7855600 0 4523700 9442000 18364 4811 16719 153951;153952;153953;153954;153955;153956;153957;153958 122621;122622;122623;122624 122621 4 GEPRDSGTLQSQEAK Unmodified 1601.7645 0.76452734 2840;5195 Q641Q2;Q9Y4E1 FAM21A;FAM21C WASH complex subunit FAM21A;WASH complex subunit FAM21C no no 0 0 1 By MS/MS 2 0 2 2 15.885 12.511 3 0.0010666 16776 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 47.345 32.783 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18365 2840;5195 16720 153959;153960 122625;122626 122626 2 GEPSREEYK Acetyl (Protein N-term) 1135.5146 0.51456723 39 A9UHW6 MIF4GD MIF4G domain-containing protein yes yes 1 0 1 By MS/MS 2.5 0.5 1 1 2 17.827 14.288 2 0.01195 18524 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.043 31.236 31699000 0 31699000 0 0 0 0 0 0 0 0 0 0 0 0 0 18366 39 16721 153961;153962 122627 122627 1 GEPVLLVGETGTGK Unmodified 1355.7296 0.72964538 4641 Q9NU22 MDN1 Midasin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 64.408 64.041 2 9.4332E-06 81380 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.57 83.748 150560000 0 65030000 0 3581300 5579200 5232900 5077900 6424100 5393100 6623500 6995400 10735000 8467900 7884000 13531000 18367 4641 16722 153963;153964;153965;153966;153967;153968;153969;153970;153971;153972;153973;153974;153975 122628;122629;122630;122631;122632;122633;122634;122635;122636;122637;122638;122639;122640 122631 12 GEPVSAEDLGVSGALTVLMK Oxidation (M) 1988.0136 0.013607739 953 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 0 1 0 By MS/MS By matching 2.2 0.4 4 1 3 2 91.188 87.595 2;3 3.1404E-58 108874 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.81 122.18 68983000 0 65673000 3310300 0 0 0 0 0 0 0 0 0 0 0 0 18368 953 16723 153976;153977;153978;153979;153980 122641;122642;122643 122641 1230 3 GEPVSAEDLGVSGALTVLMK Unmodified 1972.0187 0.018693117 953 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 97.153 93.657 2 2.113E-12 115623 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.02 105.82 48921000 0 40534000 8387300 0 0 0 0 0 0 0 0 0 0 0 0 18369 953 16723 153981;153982;153983;153984 122644;122645;122646;122647;122648 122644 5 GEPVTNLVPSMVSLEETK Oxidation (M) 1944.9714 0.97140857 2460 Q14997 PSME4 Proteasome activator complex subunit 4 yes yes 0 1 0 By MS/MS 2 0 1 1 82.057 77.353 2 6.32E-27 96217 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.68 112.09 81596000 0 81596000 0 0 0 0 0 0 0 0 0 0 0 0 0 18370 2460 16724 153985 122649 122649 4051 1 GEPVTNLVPSMVSLEETK Unmodified 1928.9765 0.97649395 2460 Q14997 PSME4 Proteasome activator complex subunit 4 yes yes 0 0 0 By MS/MS 2 0 1 1 91.974 87.064 2 1.0452E-10 108070 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.3 90.163 324190000 0 324190000 0 0 0 0 0 0 0 0 0 0 0 0 0 18371 2460 16724 153986 122650 122650 1 GEQAEEVPVNR Unmodified 1226.5891 0.58912916 904 P0CW18 PRSS56 Serine protease 56 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.379 26.578 2 1.8464E-37 27205 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 183.81 139.37 458050000 0 0 0 29065000 33630000 32503000 33101000 41317000 15503000 46205000 41011000 58819000 49956000 38631000 38305000 18372 904 16725 153987;153988;153989;153990;153991;153992;153993;153994;153995;153996;153997;153998 122651;122652;122653;122654;122655;122656;122657;122658;122659;122660;122661;122662;122663;122664 122654 13 GEQHGSSSGSSSSYGQHGSGSR Unmodified 2121.8696 0.86961413 104 CON__Q86YZ3;Q86YZ3 HRNR Hornerin yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 5.5698 5.6872 4 8.0772E-67 3542 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 123.12 119.4 + 1718700000 0 0 0 173750000 103310000 89335000 73629000 558390000 53188000 114650000 109380000 161240000 138230000 100800000 42808000 18373 104 16726 153999;154000;154001;154002;154003;154004;154005;154006;154007;154008;154009;154010 122665;122666;122667;122668;122669;122670;122671;122672;122673;122674;122675;122676;122677 122675 13 GEQMNSAVLPEMENQVAVSSLSAVIK Unmodified 2730.3568 0.35681631 1474 P43246 MSH2 DNA mismatch repair protein Msh2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 96.831 92.806 3 0.00056217 114653 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 36.483 30.025 30701000 0 30701000 0 0 0 0 0 0 0 0 0 0 0 0 0 18374 1474 16727 154011;154012 122678 122678 1 GEQMNSAVLPEMENQVAVSSLSAVIK 2 Oxidation (M) 2762.3466 0.34664555 1474 P43246 MSH2 DNA mismatch repair protein Msh2 yes yes 0 2 0 By MS/MS 3 0 1 1 88.884 85.673 3 7.3436E-05 102672 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 40.756 33.562 4907600 0 4907600 0 0 0 0 0 0 0 0 0 0 0 0 0 18375 1474 16727 154013 122679 122679 2320;2321 1 GEQTSSGTLSAFASYFNSK Unmodified 1980.9065 0.90650013 2021 P98082 DAB2 Disabled homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 86.429 86.564 2 2.9881E-66 100131 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 200.44 188.08 46346000 0 0 0 0 0 4588300 0 0 4082100 7843900 5480700 0 0 4446000 19905000 18376 2021 16728 154014;154015;154016;154017;154018;154019 122680;122681;122682;122683;122684;122685;122686 122682 7 GEQVPLHGGSPQVTVTGPSR Unmodified 2002.0232 0.023201643 4487 Q9HAP2 MLXIP MLX-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 52.857 52.813 3 0.00032 59097 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 46.982 33.752 35079000 0 0 0 4573900 2815000 5963600 3577500 3508800 3485400 6039000 0 0 0 5115800 0 18377 4487 16729 154020;154021;154022;154023;154024;154025;154026;154027;154028 122687;122688;122689;122690;122691;122692;122693 122691 7 GEQVSQNGLPAEQGSPR Unmodified 1752.8391 0.83908927 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.746 35.928 2 2.3407E-32 38505 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 155.08 147.96 84845000 0 0 0 2734500 4606700 8268600 5674700 5325800 4012500 6950100 8249600 11666000 6716900 7412300 13227000 18378 2047 16730 154029;154030;154031;154032;154033;154034;154035;154036;154037;154038;154039;154040 122694;122695;122696;122697;122698;122699;122700;122701;122702;122703;122704;122705 122697 12 GERAEELENELHHLEK Unmodified 1931.9337 0.93371793 2676 Q3V6T2 CCDC88A Girdin yes yes 0 0 1 By MS/MS 2 0 1 1 74.259 66.129 4 0.024565 87502 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 35.492 18.003 15492000 15492000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18379 2676 16731 154041 122706 122706 1 GERGLVPTDYVEILPSDGK Unmodified 2044.0477 0.047685059 5252 Q9Y5X1 SNX9 Sorting nexin-9 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 85.705 82.079 3 9.9638E-05 99266 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 56.327 52.906 41039000 0 33554000 7485500 0 0 0 0 0 0 0 0 0 0 0 0 18380 5252 16732 154042;154043 122707 122707 1 GERLNQDQLDAVSK Unmodified 1571.7903 0.79034816 2407 Q14444 CAPRIN1 Caprin-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.89 2.72 3 1 24 1 2 1 2 2 2 2 2 2 2 2 2 2 2 2 37.416 36.85 2;3 6.4156E-15 47933 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.33 96.462 3120100000 57478000 580340000 174640000 159830000 148420000 170470000 186470000 162010000 167660000 226180000 218270000 235210000 194210000 146150000 292720000 18381 2407 16733 154044;154045;154046;154047;154048;154049;154050;154051;154052;154053;154054;154055;154056;154057;154058;154059;154060;154061;154062;154063;154064;154065;154066;154067;154068;154069;154070;154071 122708;122709;122710;122711;122712;122713;122714;122715;122716;122717;122718;122719;122720;122721;122722;122723;122724;122725;122726;122727;122728;122729;122730;122731;122732;122733;122734 122715 21 GESDPAYQQYQDAANNLREDYK Unmodified 2574.1259 0.12588839 982 P13667 PDIA4 Protein disulfide-isomerase A4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 71.964 70.555 3 1.3781E-110 89472 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 182.27 175.17 801430000 44084000 552870000 18267000 0 5664500 0 3828000 17995000 6766100 20389000 28944000 15163000 0 10087000 77368000 18382 982 16734 154072;154073;154074;154075;154076;154077;154078;154079;154080;154081;154082;154083;154084;154085;154086 122735;122736;122737;122738;122739;122740;122741;122742;122743;122744;122745;122746;122747;122748;122749;122750;122751;122752 122743 18 GESGQSWPR Unmodified 1002.4519 0.45190739 2506 Q15185 PTGES3 Prostaglandin E synthase 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 23.837 23.407 2 7.2687E-06 23929 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 155.82 138.89 2756400000 0 50818000 0 122010000 111690000 117100000 139670000 131790000 86773000 210310000 416810000 309920000 349110000 220500000 489860000 18383 2506 16735 154087;154088;154089;154090;154091;154092;154093;154094;154095;154096;154097;154098;154099;154100 122753;122754;122755;122756;122757;122758;122759;122760;122761;122762;122763;122764;122765;122766;122767;122768 122758 15 GESGQSWPRLTK Unmodified 1344.6786 0.67861287 2506 Q15185 PTGES3 Prostaglandin E synthase 3 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 49.522 43.601 3 0.0058489 60307 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.694 48.685 288850000 282280000 0 6568300 0 0 0 0 0 0 0 0 0 0 0 0 18384 2506 16736 154101;154102 122769;122770 122770 2 GESIPIR Unmodified 770.42865 0.42865276 498;2683 O75436;Q4G0F5 VPS26A;VPS26B Vacuolar protein sorting-associated protein 26A;Vacuolar protein sorting-associated protein 26B no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.635 33.82 2 0.023669 36638 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 84.359 45.14 149770000 0 0 0 9288900 4808300 5724800 5134300 7025000 2972300 9689600 21403000 28800000 8794200 11099000 35032000 18385 498;2683 16737 154103;154104;154105;154106;154107;154108;154109;154110;154111;154112;154113;154114 122771;122772;122773;122774;122775;122776 122773 6 GESLDNLDSPR Unmodified 1201.5575 0.55749468 3573 Q8WWI1 LMO7 LIM domain only protein 7 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 40.784 40.552 2 0.023682 45344 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 53.597 43.568 9264800 0 0 0 3460900 0 5803900 0 0 0 0 0 0 0 0 0 18386 3573 16738 154115;154116 122777;122778 122777 2 GESNQMNLDTASEK Unmodified 1522.657 0.65695073 4014 Q99496 RNF2 E3 ubiquitin-protein ligase RING2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 2 2 2 1 2 1 2 1 2 1 2 28.303 28.519 2;3 0.00034052 31800 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.674 62.085 197650000 0 0 0 7400700 18822000 13533000 20888000 17128000 16028000 17445000 25490000 37907000 0 6517900 16494000 18387 4014 16739 154117;154118;154119;154120;154121;154122;154123;154124;154125;154126;154127;154128;154129;154130;154131;154132;154133;154134 122779;122780;122781;122782;122783;122784;122785;122786;122787 122781 8 GESNQMNLDTASEK Oxidation (M) 1538.6519 0.65186535 4014 Q99496 RNF2 E3 ubiquitin-protein ligase RING2 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 14.858 15.082 2 0.0012135 14841 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 54.471 45.149 17867000 0 0 0 0 1358700 1349600 0 0 1876900 2026500 2212200 2367700 3843400 0 2832100 18388 4014 16739 154135;154136;154137;154138;154139;154140;154141;154142 122788 122788 5513 1 GESPVDYDGGR Unmodified 1150.4891 0.48908076 2496 Q15084 PDIA6 Protein disulfide-isomerase A6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.062 28.257 2 7.4471E-05 30684 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 112.11 103.88 617450000 0 0 0 28650000 30764000 48819000 37518000 29670000 25981000 52569000 77447000 70250000 53819000 54175000 107780000 18389 2496 16740 154143;154144;154145;154146;154147;154148;154149;154150;154151;154152;154153;154154 122789;122790;122791;122792;122793;122794;122795;122796;122797;122798 122798 10 GESPVDYDGGRTR Unmodified 1407.6379 0.63787026 2496 Q15084 PDIA6 Protein disulfide-isomerase A6 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 2 23.495 23.823 3 0.0012484 24171 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.563 38.18 44191000 0 0 0 4038500 0 4059200 0 4402400 0 5873400 5737300 5681400 0 0 14399000 18390 2496 16741 154155;154156;154157;154158;154159;154160;154161;154162 122799;122800;122801 122801 3 GESPVDYDGGRTRSDIVSR Unmodified 2064.9825 0.98245904 2496 Q15084 PDIA6 Protein disulfide-isomerase A6 yes yes 0 0 2 By MS/MS 2 0 1 1 44.031 40.261 4 0.049401 50867 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 22.01 17.393 3085600 0 0 3085600 0 0 0 0 0 0 0 0 0 0 0 0 18391 2496 16742 154163 122802 122802 1 GESQTDIEITREEDFTR Unmodified 2024.9287 0.92869214 1570 P49368 CCT3 T-complex protein 1 subunit gamma yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.623 58.737 3 1.3391E-52 66841 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 138.91 129.39 474090000 0 0 0 18424000 20290000 49556000 28633000 28939000 31715000 40777000 51054000 52098000 33486000 35176000 83945000 18392 1570 16743 154164;154165;154166;154167;154168;154169;154170;154171;154172;154173;154174;154175 122803;122804;122805;122806;122807;122808;122809;122810;122811;122812;122813;122814;122815;122816 122811 14 GETAVPGAPEALR Unmodified 1266.6568 0.65681479 23 A6NDG6 PGP Phosphoglycolate phosphatase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 51.399 51.82 2 0.0031256 57722 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 74.533 53.663 74786000 0 0 0 0 0 0 1573500 0 0 0 11476000 13869000 0 14163000 33704000 18393 23 16744 154176;154177;154178;154179;154180 122817;122818;122819;122820 122819 4 GETDEEYLWCIEQTLYFK Unmodified 2323.0355 0.035465393 1164 P23526 AHCY Adenosylhomocysteinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.5 0.5 2 2 2 1 1 98.498 93.794 2;3 1.5424E-131 117278 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 275.63 261.38 71565000 66524000 0 5040900 0 0 0 0 0 0 0 0 0 0 0 0 18394 1164 16745 154181;154182;154183;154184 122821;122822;122823;122824 122823 3 GETDLIQK Unmodified 902.47091 0.4709115 1464 P42704 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 27.693 27.483 2 0.028761 29792 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 56.547 21.053 15335000 0 0 0 3026400 3572000 8736800 0 0 0 0 0 0 0 0 0 18395 1464 16746 154185;154186;154187 122825 122825 1 GETEQDLEADFPSDSFDPLNK Unmodified 2353.0234 0.023380382 2834 Q5VZL5 ZMYM4 Zinc finger MYM-type protein 4 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 87.785 83.757 2 3.7601E-72 104034 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 194.55 182.4 23296000 0 23296000 0 0 0 0 0 0 0 0 0 0 0 0 0 18396 2834 16747 154188;154189 122826 122826 1 GETFEVPEIVPFR Unmodified 1518.7718 0.77184455 2310 Q13535 ATR Serine/threonine-protein kinase ATR yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 90.835 90.962 2 0.016646 105381 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.292 35.626 3216100 0 0 0 0 0 0 0 0 0 1502400 0 0 0 0 1713700 18397 2310 16748 154190;154191 122827 122827 1 GETHQGIGLFPSNFVTADLTAEPEMIK Unmodified 2901.4219 0.4218594 3659 Q92783 STAM Signal transducing adapter molecule 1 yes yes 0 0 0 By MS/MS 2 0 1 1 98.492 93.757 3 0.0022052 115960 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 30.855 10.429 30088000 0 30088000 0 0 0 0 0 0 0 0 0 0 0 0 0 18398 3659 16749 154192 122828 122828 1 GETIEGALCK Unmodified 1076.5172 0.51720977 2967 Q6SJ93 FAM111B Protein FAM111B yes yes 0 0 0 By MS/MS 2 0 1 1 45.488 40.167 2 0.017068 52202 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.692 38.518 21777000 0 21777000 0 0 0 0 0 0 0 0 0 0 0 0 0 18399 2967 16750 154193 122829 122829 1 GETITGLLQEFDVQEQDIETLHGSVHVTLCGTPK Unmodified 3750.8411 0.84106969 3632 Q92597 NDRG1 Protein NDRG1 yes yes 0 0 0 By MS/MS 3 0 1 1 97.654 94.141 4 4.421E-06 97562 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 40.463 36.018 7696000 7696000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18400 3632 16751 154194 122830 122830 1 GETLPTEAR Unmodified 972.48762 0.4876242 3295 Q8IZH2 XRN1 5'-3' exoribonuclease 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 26.835 27.108 2 0.0052256 29047 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 79.713 54.894 55978000 0 0 0 0 0 7418700 7357100 0 7118100 0 12648000 0 0 7324300 14111000 18401 3295 16752 154195;154196;154197;154198;154199;154200;154201 122831;122832;122833;122834 122832 4 GETQGLLTAK Unmodified 1016.5502 0.55022446 3252 Q8IX01 SUGP2 SURP and G-patch domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 33.706 33.842 2 0.014232 37059 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 50.805 9.3752 41917000 0 0 0 3492100 2615400 3299600 3227000 3295300 0 4295100 4824700 5941900 5805800 5120400 0 18402 3252 16753 154202;154203;154204;154205;154206;154207;154208;154209;154210;154211 122835;122836;122837;122838;122839 122835 5 GETVNDCHAEIISR Unmodified 1599.7311 0.73111872 1766 P55265 ADAR Double-stranded RNA-specific adenosine deaminase yes yes 0 0 0 By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 34.623 34.806 3 0.0013147 37174 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.254 48.152 25944000 0 0 0 1920000 0 0 2266900 2694000 1263000 0 0 0 3572300 3058900 11169000 18403 1766 16754 154212;154213;154214;154215;154216;154217;154218 122840;122841 122840 2 GETVSGGNFHGEYPAK Unmodified 1648.7481 0.74814899 1456 P42357 HAL Histidine ammonia-lyase yes yes 0 0 0 By MS/MS 10 0 2 2 35.875 35.422 2;3 0.00071836 39524 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 59.198 41.725 35178000 0 0 0 35178000 0 0 0 0 0 0 0 0 0 0 0 18404 1456 16755 154219;154220 122842;122843 122843 2 GEVAEEFGIIMK Unmodified 1321.6588 0.65878863 1420 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 yes yes 0 0 0 By MS/MS 2 0 1 1 87.27 82.462 2 0.001488 102519 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.7 81.614 13282000 0 13282000 0 0 0 0 0 0 0 0 0 0 0 0 0 18405 1420 16756 154221 122844 122844 1 GEVDEEDAALYR Unmodified 1365.6048 0.6048388 4556 Q9NPQ8 RIC8A Synembryn-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.715 45.885 2 4.8765E-08 51608 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 121.73 98.413 121630000 0 0 0 5423000 5194800 12679000 6089800 9027700 5471300 12224000 12835000 12469000 11350000 13446000 15416000 18406 4556 16757 154222;154223;154224;154225;154226;154227;154228;154229;154230;154231;154232;154233 122845;122846;122847;122848;122849;122850;122851;122852;122853;122854;122855;122856;122857;122858 122855 14 GEVDTAPQGNK Unmodified 1114.5255 0.52546627 1536 P48382 RFX5 DNA-binding protein RFX5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 9.142 9.2759 2 0.00015167 6450 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 108.98 80.251 240150000 0 0 0 15613000 15559000 13020000 21815000 18589000 12874000 13417000 36833000 37034000 22215000 12031000 21148000 18407 1536 16758 154234;154235;154236;154237;154238;154239;154240;154241;154242;154243;154244;154245 122859;122860;122861;122862;122863;122864;122865;122866;122867;122868 122862 9 GEVDVDVPK Unmodified 956.48148 0.48147619 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.953 40.133 2 0.017806 44283 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 55.37 26.22 354490000 0 0 0 16859000 17536000 22656000 25008000 30975000 29208000 31980000 24602000 45634000 39999000 30240000 39792000 18408 2172 16759 154246;154247;154248;154249;154250;154251;154252;154253;154254;154255;154256;154257 122869;122870;122871 122870 3 GEVDVSLANVEGDLK Unmodified 1543.773 0.77296676 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 3 1 1 1 1 1 1 1 1 1 1 1 80.206 78.891 2 3.0727E-29 91664 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 144.47 113.04 336690000 6841400 167530000 0 0 8125300 10292000 8387600 14321000 11077000 18202000 14697000 17587000 12405000 16876000 30348000 18409 2172 16760 154258;154259;154260;154261;154262;154263;154264;154265;154266;154267;154268;154269;154270;154271;154272 122872;122873;122874;122875;122876;122877;122878;122879;122880;122881;122882;122883;122884;122885;122886;122887;122888 122877 16 GEVDVTHDSEPK Unmodified 1311.5943 0.59427411 4659 Q9NV35 NUDT15 Probable 8-oxo-dGTP diphosphatase NUDT15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 1 4 1 21.11 17.341 2;3 5.801E-07 22839 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 132.32 93.171 288280000 7177100 277020000 4079700 0 0 0 0 0 0 0 0 0 0 0 0 18410 4659 16761 154273;154274;154275;154276;154277;154278 122889;122890;122891;122892;122893 122889 4 GEVFNELVGK Unmodified 1090.5659 0.56587452 813 P05556 ITGB1 Integrin beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 64.928 65.006 2 0.0095404 74399 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 57.59 41.928 160780000 0 0 0 8104400 11600000 12792000 11754000 14855000 14034000 18845000 15747000 20172000 16619000 0 16260000 18411 813 16762 154279;154280;154281;154282;154283;154284;154285;154286;154287;154288;154289 122894;122895;122896 122895 3 GEVFSVLEFAPSNHSFK Unmodified 1893.9261 0.92611336 4287 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O yes yes 0 0 0 By MS/MS 2 0 1 1 93.573 85.443 3 0.020665 110629 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 19.819 13.788 4363600 4363600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18412 4287 16763 154290 122897 122897 1 GEVITTYCPANNEPIAR Unmodified 1903.9098 0.90981137 1573 P49419 ALDH7A1 Alpha-aminoadipic semialdehyde dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 62.389 62.469 2 1.2632E-06 70625 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 102.87 88.311 16382000 0 0 0 2441100 0 0 0 0 0 0 3685900 0 0 0 10255000 18413 1573 16764 154291;154292;154293;154294 122898;122899;122900;122901 122898 4 GEVLGDVLQLETLK Unmodified 1512.8399 0.83992412 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 94.201 89.041 2 9.8137E-06 111897 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.88 117.97 77603000 4161300 71634000 1807700 0 0 0 0 0 0 0 0 0 0 0 0 18414 2459 16765 154295;154296;154297 122902;122903;122904 122902 3 GEVNGQVGLFPSNYVK Unmodified 1706.8628 0.86278482 2581 Q15811 ITSN1 Intersectin-1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 80.543 76.525 2 3.2099E-91 94914 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 211.38 187.04 + 67389000 0 67389000 0 0 0 0 0 0 0 0 0 0 0 0 0 18415 2581 16766 154298;154299 122905;122906 122905 2 GEVQALFLR Unmodified 1031.5764 0.57637963 4666 Q9NVE7 PANK4 Pantothenate kinase 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 75.558 75.203 2 0.0052334 86793 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 79.469 36.345 21834000 0 0 0 0 21834000 0 0 0 0 0 0 0 0 0 0 18416 4666 16767 154300;154301;154302 122907;122908;122909 122909 3 GEVQRSLLEK Unmodified 1157.6404 0.64043645 1753 P55039 DRG2 Developmentally-regulated GTP-binding protein 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 1 2 34.634 30.263 2;3 0.010165 38081 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 125.75 65.157 119470000 61623000 0 57851000 0 0 0 0 0 0 0 0 0 0 0 0 18417 1753 16768 154303;154304;154305 122910;122911;122912 122912 0 GEVQVSDK Unmodified 860.42396 0.42396131 5146 Q9Y3A5 SBDS Ribosome maturation protein SBDS yes yes 0 0 0 By MS/MS 10 0 1 1 9.325 9.2865 2 0.039356 7800 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 50.703 5.9365 7000200 0 0 0 0 0 7000200 0 0 0 0 0 0 0 0 0 18418 5146 16769 154306 122913 122913 1 GEVSARQELK Unmodified 1115.5935 0.59348625 980 P13639 EEF2 Elongation factor 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.88 4.04 1 2 5 1 1 1 1 1 1 1 1 26.785 26.938 2 4.9327E-10 17972 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 174.86 115.52 2418800000 222350000 737040000 1372500000 0 0 0 0 0 0 0 12661000 8770100 4215900 13330000 47937000 18419 980 16770 154307;154308;154309;154310;154311;154312;154313;154314 122914;122915;122916;122917;122918;122919;122920;122921;122922 122919 8 GEVTAADLFNSR Unmodified 1278.6204 0.62042929 1802 P58107 EPPK1 Epiplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 68.814 68.805 2 0.010467 79766 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 56.359 46.578 26059000 0 0 0 4671600 3027600 4153000 0 3047600 0 0 4755900 0 3298400 0 3105000 18420 1802 16771 154315;154316;154317;154318;154319;154320;154321 122923;122924 122924 2 GEVTEMFSYEESNPK Unmodified 1745.7454 0.74543138 3491 Q8TCT9 HM13 Minor histocompatibility antigen H13 yes yes 0 0 0 By MS/MS 10 0 1 1 68.294 68.788 2 0.016001 78343 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.568 39.839 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18421 3491 16772 154322 122925 122925 1 GEVTQQTIQK Unmodified 1130.5932 0.5931519 471 O75177 SS18L1 Calcium-responsive transactivator yes yes 0 0 0 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 17.943 18.137 2 0.0055824 17157 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.371 24.601 6726400 0 0 0 0 1189500 0 0 0 0 1423500 0 0 1278600 0 2834900 18422 471 16773 154323;154324;154325;154326 122926 122926 1 GEVVDAVVTQVNK Unmodified 1356.7249 0.72489436 1901 P62487 POLR2G DNA-directed RNA polymerase II subunit RPB7 yes yes 0 0 0 By matching By MS/MS 2.33 0.471 2 1 1 2 65.741 59.422 2 1.9359E-08 76433 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.02 125.5 196340000 8147600 188190000 0 0 0 0 0 0 0 0 0 0 0 0 0 18423 1901 16774 154327;154328;154329 122927;122928;122929;122930 122927 4 GEVVEGDPDK Unmodified 1043.4771 0.47711909 346 O43615 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.02 15.191 2 0.0016808 15020 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 103.55 93.132 166560000 0 0 0 6169900 8774600 7169200 14498000 13499000 6789800 12647000 18189000 21139000 19912000 15265000 22507000 18424 346 16775 154330;154331;154332;154333;154334;154335;154336;154337;154338;154339;154340;154341 122931;122932;122933;122934;122935;122936;122937;122938;122939;122940;122941;122942;122943 122932 8 GEVVNYSDSR Unmodified 1124.5098 0.5098162 4217 Q9BX10 GTPBP2 GTP-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 23.945 24.052 2 0.0044926 25094 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 72.643 59.606 13896000 0 0 0 0 1509700 2302600 0 0 1397600 2748800 0 0 2904500 3033300 0 18425 4217 16776 154342;154343;154344;154345;154346;154347 122944;122945;122946;122947;122948;122949 122948 6 GEVYPFGIVGMANK Unmodified 1480.7384 0.73843593 517 O75534 CSDE1 Cold shock domain-containing protein E1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 7.42 3.66 3 1 8 1 2 1 1 1 1 1 1 1 1 1 85.609 84.15 2 0.00039485 96816 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 85.256 78.596 430070000 19433000 326400000 4516900 0 0 5590500 0 5885900 4049000 8034600 8261400 8398200 0 8351100 31147000 18426 517 16777 154348;154349;154350;154351;154352;154353;154354;154355;154356;154357;154358;154359 122950;122951;122952;122953;122954;122955;122956;122957;122958;122959;122960 122960 11 GEVYPFGIVGMANK Oxidation (M) 1496.7334 0.73335055 517 O75534 CSDE1 Cold shock domain-containing protein E1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 79.48 78.17 2 8.3027E-05 90264 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.831 70.215 349330000 16319000 196070000 8091100 4586800 5388800 14534000 6901700 0 7400200 15833000 16498000 0 10432000 12526000 34746000 18427 517 16777 154360;154361;154362;154363;154364;154365;154366;154367;154368;154369;154370;154371;154372;154373 122961;122962;122963;122964;122965;122966;122967;122968;122969 122964 677 9 GEWCGVELDEPLGK Unmodified 1587.7239 0.72390808 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 no no 0 0 0 By MS/MS 2 0 1 1 81.274 76.569 2 0.036875 95170 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.829 51.941 126270000 0 126270000 0 0 0 0 0 0 0 0 0 0 0 0 0 18428 1286 16778 154374 122970 122970 1 GEYAELYR Unmodified 999.46616 0.46616048 3309 Q8N196 SIX5 Homeobox protein SIX5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 41.533 41.624 2 0.036499 46617 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.854 36.313 11699000 0 0 0 0 0 4573400 2724300 4400800 0 0 0 0 0 0 0 18429 3309 16779 154375;154376;154377 122971;122972 122971 2 GEYAVRAIK Unmodified 1005.5607 0.56072956 3608 Q92499 DDX1 ATP-dependent RNA helicase DDX1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 32.503 27.79 2 0.022401 39376 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 125.31 74.611 218000000 209090000 0 8908900 0 0 0 0 0 0 0 0 0 0 0 0 18430 3608 16780 154378;154379 122973 122973 0 GEYDMTVPK Unmodified 1038.4692 0.46919694 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 43.282 43.46 2 0.020656 48796 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 52.937 11.908 175570000 0 0 0 11702000 8637900 12861000 11785000 19614000 0 12012000 17895000 19683000 15943000 15079000 30356000 18431 2172 16781 154380;154381;154382;154383;154384;154385;154386;154387;154388;154389;154390 122974;122975;122976;122977 122976 4 GEYDVTMPK Unmodified 1038.4692 0.46919694 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 46.036 45.778 2 0.025904 51497 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 50.04 15.788 292960000 0 83480000 0 0 10215000 10086000 13228000 17859000 12358000 13036000 19643000 26052000 28741000 28855000 29409000 18432 2172 16782 154391;154392;154393;154394;154395;154396;154397;154398;154399;154400;154401;154402 122978;122979;122980;122981;122982 122982 5 GEYDVTMPK Oxidation (M) 1054.4641 0.46411156 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 26.184 26.349 2 0.0085747 28023 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 60.436 16.629 22291000 0 0 0 0 0 0 4290100 3439300 3959800 4636200 0 0 5965500 0 0 18433 2172 16782 154403;154404;154405;154406;154407 122983;122984 122983 3506 2 GEYDVTVPK Unmodified 1006.4971 0.49712625 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 43.431 43.761 2 0.013807 48858 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 59.245 38.546 272520000 0 0 0 0 0 22575000 20874000 0 24028000 25041000 34889000 25624000 38822000 30249000 50415000 18434 2172 16783 154408;154409;154410;154411;154412;154413;154414;154415;154416 122985;122986;122987;122988;122989;122990;122991 122988 7 GEYHRAPVAIK Unmodified 1239.6724 0.67240528 3384 Q8NB16 MLKL Mixed lineage kinase domain-like protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 21.833 22.062 3 0.012264 22878 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 43.604 25.866 59817000 0 0 0 0 3455600 0 9707400 8843400 10468000 0 0 6749500 0 9387500 11206000 18435 3384 16784 154417;154418;154419;154420;154421;154422;154423 122992 122992 1 GEYTLVVK Unmodified 907.50148 0.50148335 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48.807 47.749 2 0.018051 52814 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.757 31.4 1294400000 34147000 869300000 48474000 10358000 11189000 28877000 16100000 14982000 16890000 33571000 36607000 38968000 20040000 28816000 86089000 18436 1124 16785 154424;154425;154426;154427;154428;154429;154430;154431;154432;154433;154434;154435;154436;154437;154438 122993;122994;122995 122995 3 GEYWAEHPTIK Unmodified 1329.6354 0.63535107 2725 Q5GLZ8 HERC4 Probable E3 ubiquitin-protein ligase HERC4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 5 1 2 2 55.672 50.14 2;3 0.0077587 62495 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 55.452 41.489 142750000 20632000 72342000 49776000 0 0 0 0 0 0 0 0 0 0 0 0 18437 2725 16786 154439;154440;154441;154442;154443 122996;122997;122998;122999 122998 3 GFAAQFIK Unmodified 880.48069 0.48068833 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 64.8 64.814 2 0.017143 73486 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 66.138 49.211 32928000 0 0 0 2875000 2874200 3193500 4536200 3840700 0 2418800 0 0 3570300 4604000 5015000 18438 19 16787 154444;154445;154446;154447;154448;154449;154450;154451;154452 123000;123001;123002 123002 3 GFAFVEFETK Unmodified 1173.5706 0.57062555 2684 Q4G0J3 LARP7 La-related protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 82.658 82.263 2 0.0049244 99789 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 87.308 66.683 17016000 0 0 9087500 0 0 0 1059900 0 0 3008900 0 0 1443700 2415700 0 18439 2684 16788 154453;154454;154455;154456;154457;154458;154459;154460 123003;123004;123005;123006;123007;123008 123007 6 GFAFVEYESHR Unmodified 1340.6149 0.61494998 2 A0AV96;Q8TBY0;Q9NQ94 RBM47;RBM46;A1CF RNA-binding protein 47;Probable RNA-binding protein 46;APOBEC1 complementation factor yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.824 63.915 3 0.017459 72316 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.327 28.115 72994000 0 0 0 2958400 1606100 8914400 3783000 5165300 5759000 5674400 9410500 6937000 5379400 4162300 13244000 18440 2 16789 154461;154462;154463;154464;154465;154466;154467;154468;154469;154470;154471;154472 123009 123009 1 GFAFVQYVNER Unmodified 1328.6513 0.65133548 851 P07910 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.509 79.568 2 0.00028318 91708 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 93.111 78.617 625250000 0 0 0 14627000 27306000 57076000 31034000 34724000 40434000 63418000 43198000 73122000 45360000 57947000 137000000 18441 851 16790 154473;154474;154475;154476;154477;154478;154479;154480;154481;154482;154483;154484 123010;123011;123012;123013;123014;123015;123016;123017;123018;123019;123020;123021 123016 12 GFAFVTFESPADAK Unmodified 1485.714 0.71399532 1395 P38159;Q96E39;O75526;Q8N7X1 RBMX;RBMXL1;RBMXL2;RBMXL3 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1;RNA-binding motif protein, X-linked-like-2;RNA-binding motif protein, X-linked-like-3 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 84.374 84.439 2 7.0609E-12 97833 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 102.53 87.282 123930000 0 0 0 5205800 7022200 14487000 10173000 8422600 7578100 13510000 10453000 16096000 7829000 6950000 16203000 18442 1395 16791 154485;154486;154487;154488;154489;154490;154491;154492;154493;154494;154495;154496 123022;123023;123024;123025;123026;123027;123028;123029;123030;123031;123032;123033;123034;123035;123036;123037;123038;123039;123040;123041 123025 20 GFALVGVGSEASSK Unmodified 1307.6721 0.67213051 2620 Q16630 CPSF6 Cleavage and polyadenylation specificity factor subunit 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 67.976 66.751 2 1.0354E-28 77572 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 175.15 160 1471700000 123780000 348190000 27109000 40785000 60739000 61329000 66582000 62230000 50283000 73960000 96124000 154270000 86634000 83116000 136550000 18443 2620 16792 154497;154498;154499;154500;154501;154502;154503;154504;154505;154506;154507;154508;154509;154510;154511;154512;154513 123042;123043;123044;123045;123046;123047;123048;123049;123050;123051;123052;123053;123054;123055;123056;123057;123058;123059;123060 123059 17 GFAQYELFK Unmodified 1101.5495 0.54949617 4459 Q9H900 ZWILCH Protein zwilch homolog yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 81.128 77.489 2 0.0088229 96403 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.046 66.155 47824000 0 31554000 16270000 0 0 0 0 0 0 0 0 0 0 0 0 18444 4459 16793 154514;154515 123061;123062 123061 2 GFASVSEK Unmodified 823.40758 0.40758296 3929 Q96MX6 WDR92 WD repeat-containing protein 92 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 7.44 3.62 2 1 6 2 1 1 1 1 1 1 1 22.473 21.333 2 0.013906 22207 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 71.342 13.175 222230000 0 182010000 3807500 0 0 0 0 0 0 5737600 6978200 0 7882800 5481600 10327000 18445 3929 16794 154516;154517;154518;154519;154520;154521;154522;154523;154524 123063;123064;123065;123066;123067;123068 123067 5 GFAVSERCK Unmodified 1052.5073 0.50731378 3779 Q96CN7 ISOC1 Isochorismatase domain-containing protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 24.476 19.399 2 0.035393 27542 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.01 79.87 45601000 45601000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18446 3779 16795 154525 123069 123069 1 GFAYIEFSDK Unmodified 1175.5499 0.5498901 3140 Q86U42 PABPN1 Polyadenylate-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 76.781 75.386 2 0.0065119 86922 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.711 47.935 74557000 10566000 0 20871000 0 0 0 0 0 0 7805100 7339500 8887300 0 8301900 10787000 18447 3140 16796 154526;154527;154528;154529;154530;154531;154532 123070;123071;123072;123073;123074;123075 123070 6 GFCFITFKEEEPVK Unmodified 1729.8385 0.83854391 2365 Q14103 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 yes yes 0 0 1 By MS/MS 10 0 1 1 80.094 80.324 3 0.0030668 92448 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.33 38.893 8368100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8368100 18448 2365 16797 154533 123076 123076 1 GFCFITYTDEEPVK Unmodified 1704.7705 0.77052392 236 O14979 HNRNPDL Heterogeneous nuclear ribonucleoprotein D-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 4 2 1 1 82.017 82.216 2 7.0397E-08 94910 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.616 82.403 10926000 0 0 0 0 0 0 0 0 0 0 3866400 0 0 0 7060000 18449 236 16798 154534;154535;154536;154537 123077;123078;123079 123077 3 GFCFLEYEDHK Unmodified 1443.6129 0.61290107 322;407 O43390;O60506 HNRNPR;SYNCRIP Heterogeneous nuclear ribonucleoprotein R;Heterogeneous nuclear ribonucleoprotein Q no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 73.21 73.363 3 0.048044 84475 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 31.348 28.651 35746000 0 0 0 0 0 11222000 0 0 0 0 0 0 6226000 6906200 11392000 18450 322;407 16799 154538;154539;154540;154541 123080 123080 1 GFCYVEFDEVDSLK Unmodified 1706.7498 0.74978848 2490 Q15056 EIF4H Eukaryotic translation initiation factor 4H yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.2 3.94 1 4 1 4 2 2 2 1 1 1 1 85.503 83.983 2;3 3.5099E-34 104706 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 157.38 151.53 262210000 10439000 208460000 14830000 0 0 0 0 0 0 0 5959300 3179000 0 2568500 16783000 18451 2490 16800 154542;154543;154544;154545;154546;154547;154548;154549;154550;154551 123081;123082;123083;123084;123085;123086;123087;123088;123089;123090;123091;123092 123081 12 GFDALQESSLDSGMSGRK Unmodified 1883.8683 0.86834049 3915 Q96L91 EP400 E1A-binding protein p400 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 63.087 63.403 3 5.6519E-06 72377 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 71.558 62.616 36600000 0 0 0 0 0 0 0 0 0 5539000 5294900 7349500 5381900 6090200 6944100 18452 3915 16801 154552;154553;154554;154555;154556;154557;154558 123093;123094;123095;123096;123097;123098;123099 123099 7 GFDEYMK Oxidation (M) 904.36367 0.36366924 2054 Q01469 FABP5 Fatty acid-binding protein, epidermal yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 25.212 25.372 2 0.030255 27103 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 66.138 61.313 185920000 0 0 0 80390000 9948900 8614600 9762300 19677000 5518200 11224000 9960200 0 14124000 9584600 7113200 18453 2054 16802 154559;154560;154561;154562;154563;154564;154565;154566;154567;154568;154569 123100;123101 123101 2 GFDFQWPQPDK Unmodified 1363.6197 0.619701 3683 Q92900 UPF1 Regulator of nonsense transcripts 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 82.875 83.012 2 0.016501 96118 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 44.309 34.078 16990000 0 0 0 0 0 2909200 0 912460 1229700 2292700 0 0 0 0 9646100 18454 3683 16803 154570;154571;154572;154573;154574 123102;123103 123102 2 GFDILGIK Unmodified 861.496 0.49600404 1733 P54136 RARS Arginine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83.43 82.294 2 0.0092148 94751 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.614 49.876 176820000 12356000 28586000 12717000 3491300 4064800 0 4749800 6008300 6779600 11697000 12591000 12709000 0 21917000 39157000 18455 1733 16804 154575;154576;154577;154578;154579;154580;154581;154582;154583;154584;154585;154586;154587;154588 123104;123105;123106;123107;123108;123109;123110;123111;123112 123106 9 GFDNPEENSSEFPVTFK Unmodified 1942.8585 0.85848731 3241 Q8IWI9 MGA MAX gene-associated protein yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching 9.3 2.1 1 9 1 1 1 1 1 1 1 1 1 1 79.958 79.761 2 0.0005312 92402 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 65.563 52.795 35595000 0 4726900 0 0 0 2851800 2323100 2935000 2361600 3900900 2895400 4498200 2654200 0 6447800 18456 3241 16805 154589;154590;154591;154592;154593;154594;154595;154596;154597;154598 123113;123114;123115;123116;123117;123118 123114 6 GFDPTASPFCQ Unmodified 1225.5074 0.50737336 5059 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.175 75.234 2 0.02491 86364 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.882 35.516 41788000 0 0 0 2160100 2942200 1502900 3128700 3254900 2406200 3350800 5189800 4617200 2864700 4348800 6022100 18457 5059 16806 154599;154600;154601;154602;154603;154604;154605;154606;154607;154608;154609;154610 123119;123120 123120 2 GFDQDMANK Oxidation (M) 1040.4233 0.42330938 2641 Q16881 TXNRD1 Thioredoxin reductase 1, cytoplasmic yes yes 0 1 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 10.629 10.936 2 0.020864 8972 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.657 40.464 5336800 0 0 0 0 0 0 0 0 0 0 0 1483800 0 949620 2903300 18458 2641 16807 154611;154612;154613 123121 123121 1 GFDQDMANK Unmodified 1024.4284 0.42839476 2641 Q16881 TXNRD1 Thioredoxin reductase 1, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 24.345 24.886 2 0.022148 26017 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 51.662 37.739 42942000 0 0 0 0 0 0 0 0 0 0 5864800 6253900 0 3988800 26835000 18459 2641 16807 154614;154615;154616;154617 123122;123123 123123 2 GFDQEEVFEK Unmodified 1226.5455 0.54553301 1291 P30876 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 8.86 2.8 1 6 1 1 1 1 1 1 1 55.935 54.463 2 0.0096087 72086 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.1 55.54 40312000 8586400 0 0 4326800 3976200 0 0 0 0 6798700 0 0 6138500 10485000 0 18460 1291 16808 154618;154619;154620;154621;154622;154623;154624 123124;123125;123126;123127 123126 4 GFDQEEVFEKPTR Unmodified 1580.7471 0.74708636 1291 P30876 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 52.465 52.549 3 0.0056788 58635 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 34.432 29.337 33637000 0 0 0 2670000 2761100 0 0 0 0 4659000 6970000 5656400 6226100 4694100 0 18461 1291 16809 154625;154626;154627;154628;154629;154630;154631 123128;123129;123130;123131 123131 4 GFDQQGLNPTTLK Unmodified 1417.7201 0.72014333 2433 Q14686 NCOA6 Nuclear receptor coactivator 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.76 61.86 2 8.6188E-09 69849 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.84 87.484 135440000 0 0 0 7370300 7134400 10885000 7030200 9894600 11030000 13659000 11426000 16065000 11240000 11006000 18702000 18462 2433 16810 154632;154633;154634;154635;154636;154637;154638;154639;154640;154641;154642;154643 123132;123133;123134;123135;123136;123137;123138;123139;123140;123141;123142;123143;123144;123145 123135 14 GFDTSSSSSNSAASSSFK Unmodified 1752.7439 0.74385148 1600 P49790 NUP153 Nuclear pore complex protein Nup153 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 36.627 36.091 2 9.4452E-72 40056 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 174.39 164.71 477540000 0 78556000 0 19059000 22571000 25854000 28902000 33636000 22761000 34665000 34514000 43535000 41647000 46552000 45291000 18463 1600 16811 154644;154645;154646;154647;154648;154649;154650;154651;154652;154653;154654;154655;154656;154657 123146;123147;123148;123149;123150;123151;123152;123153;123154;123155;123156;123157;123158;123159;123160 123155 15 GFDTTAINK Unmodified 965.48181 0.48181054 2379 Q14155 ARHGEF7 Rho guanine nucleotide exchange factor 7 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 35.384 35.374 2 0.0044372 37821 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 86.833 54.897 105880000 0 0 0 11718000 10816000 17113000 16162000 0 10733000 0 0 0 20741000 18594000 0 18464 2379 16812 154658;154659;154660;154661;154662;154663;154664;154665;154666 123161;123162;123163;123164;123165;123166;123167;123168 123165 8 GFDVFNALDLMENK Oxidation (M) 1627.7552 0.75520821 1280 P30419;O60551 NMT1;NMT2 Glycylpeptide N-tetradecanoyltransferase 1;Glycylpeptide N-tetradecanoyltransferase 2 yes no 0 1 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 94.367 90.849 2 2.0729E-29 112818 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 139.76 125.07 80767000 0 79102000 1665300 0 0 0 0 0 0 0 0 0 0 0 0 18465 1280 16813 154667;154668;154669 123169;123170;123171 123169 1882 3 GFDVFNALDLMENK Unmodified 1611.7603 0.76029359 1280 P30419;O60551 NMT1;NMT2 Glycylpeptide N-tetradecanoyltransferase 1;Glycylpeptide N-tetradecanoyltransferase 2 yes no 0 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 1 3 99.443 94.216 2 0.00082064 117776 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.345 78.388 111920000 24684000 87238000 0 0 0 0 0 0 0 0 0 0 0 0 0 18466 1280 16813 154670;154671;154672;154673 123172;123173;123174 123174 1 GFEANAPAFDR Unmodified 1193.5465 0.54653606 327 O43426 SYNJ1 Synaptojanin-1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 53.966 54.255 2 0.01492 61602 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 54.416 38.214 10697000 0 0 0 0 0 0 2335500 0 1267700 0 0 0 2827500 0 4266100 18467 327 16814 154674;154675;154676;154677 123175 123175 1 GFENVIHDK Unmodified 1057.5193 0.51925868 1161 P23497 SP100 Nuclear autoantigen Sp-100 yes yes 0 0 0 By MS/MS 2 0 1 1 42.188 38.52 2 0.047754 48733 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 88.819 74.15 12219000 0 0 12219000 0 0 0 0 0 0 0 0 0 0 0 0 18468 1161 16815 154678 123176 123176 0 GFESPSDNSSAMLLQWHEK Unmodified 2161.9739 0.97386819 289 O15511 ARPC5 Actin-related protein 2/3 complex subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 82.771 77.645 3 2.183E-31 98018 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.19 118.06 74087000 11765000 51817000 10505000 0 0 0 0 0 0 0 0 0 0 0 0 18469 289 16816 154679;154680;154681 123177;123178 123177 2 GFESPSDNSSAMLLQWHEK Oxidation (M) 2177.9688 0.96878281 289 O15511 ARPC5 Actin-related protein 2/3 complex subunit 5 yes yes 0 1 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 73.068 73.05 3 2.5807E-05 83624 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.764 57.014 27520000 0 0 0 3755300 0 0 5034700 0 0 0 0 0 0 0 18730000 18470 289 16816 154682;154683;154684 123179 123179 371 1 GFESYRAQLDTK Unmodified 1413.6888 0.6888432 3838 Q96FS4 SIPA1 Signal-induced proliferation-associated protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 54.256 46.193 3 0.043708 63228 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 28.764 16.148 28837000 28837000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18471 3838 16817 154685 123180 123180 1 GFFDPNTEENLTYLQLK Unmodified 2027.984 0.98402217 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 89.948 90.02 2 3.6506E-14 104305 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 119.76 114.26 53819000 0 0 0 7803000 1812400 2152000 1277200 8058300 2671400 9250500 5664200 4579700 1042300 1657400 7850500 18472 1029 16818 154686;154687;154688;154689;154690;154691;154692;154693;154694;154695;154696;154697 123181;123182;123183;123184;123185;123186;123187;123188 123186 8 GFFDPNTHENLTYR Unmodified 1709.7798 0.77978347 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.146 67.227 3 0.0027636 77020 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 35.35 27.374 72597000 0 0 0 3900600 2073000 7528100 2620000 4949700 7122000 5494400 3719600 8341000 7122200 6070700 13656000 18473 2501 16819 154698;154699;154700;154701;154702;154703;154704;154705;154706;154707;154708;154709 123189;123190;123191;123192;123193;123194;123195;123196 123195 8 GFFEGTIASK Unmodified 1055.5288 0.52876073 1721 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.28 3.23 3 1 14 1 2 1 1 1 1 1 1 2 2 1 1 2 1 62.705 61.509 2 0.0009285 69944 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 112.84 55.561 1856300000 575220000 470460000 161940000 29418000 35052000 53582000 47482000 71765000 44047000 66792000 78247000 83120000 86081000 53138000 0 18474 1721 16820 154710;154711;154712;154713;154714;154715;154716;154717;154718;154719;154720;154721;154722;154723;154724;154725;154726;154727 123197;123198;123199;123200;123201;123202;123203;123204;123205;123206;123207;123208;123209;123210;123211;123212;123213;123214;123215;123216;123217;123218;123219;123220;123221 123200 21 GFFGGLETK Unmodified 954.48108 0.48108226 390 O60268 KIAA0513 Uncharacterized protein KIAA0513 yes yes 0 0 0 By MS/MS 2 0 1 1 74.918 66.787 2 0.034225 88287 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.207 44.847 8917500 8917500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18475 390 16821 154728 123222 123222 1 GFFLSAAGK Unmodified 896.4756 0.47560295 4133 Q9BSV6 TSEN34 tRNA-splicing endonuclease subunit Sen34 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 64.73 64.826 2 0.028187 74008 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 49.097 29.25 48123000 0 0 0 0 3732900 4139400 6488100 4469300 3472100 5707900 0 7199800 6936500 5977200 0 18476 4133 16822 154729;154730;154731;154732;154733;154734;154735;154736;154737 123223;123224 123223 2 GFGDGYNGYGGGPGGGNFGGSPGYGGGR Unmodified 2494.0323 0.03226278 1141 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 2 2 2 2 2 2 2 2 2 68.016 68.215 2;3 4.1344E-60 78290 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 71.418 70.192 214950000 0 0 0 0 4925800 0 6720300 13848000 9257800 22852000 30155000 30993000 13504000 20607000 62086000 18477 1141 16823 154738;154739;154740;154741;154742;154743;154744;154745;154746;154747;154748;154749;154750;154751;154752;154753;154754;154755;154756 123225;123226;123227;123228;123229;123230;123231;123232;123233;123234;123235;123236;123237;123238 123230 14 GFGDVGEAK Unmodified 878.4134 0.41339662 2380 Q14157 UBAP2L Ubiquitin-associated protein 2-like yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.65 2.93 2 1 14 2 1 1 1 1 2 1 2 1 1 1 1 1 1 27.325 26.773 2 0.00355 28955 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 89.698 53.513 2113400000 0 361010000 6814100 97529000 96618000 99903000 145980000 106620000 122250000 140970000 193010000 179310000 155300000 160350000 247790000 18478 2380 16824 154757;154758;154759;154760;154761;154762;154763;154764;154765;154766;154767;154768;154769;154770;154771;154772;154773 123239;123240;123241;123242;123243;123244;123245;123246;123247;123248;123249;123250;123251;123252;123253;123254;123255 123249 11 GFGFGLVK Unmodified 823.45922 0.4592246 1485 P45880 VDAC2 Voltage-dependent anion-selective channel protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 75.801 75.747 2 0.027249 87210 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 57.463 54.219 52318000 0 0 0 16079000 4990300 6544100 0 10678000 0 4875100 0 9151300 0 0 0 18479 1485 16825 154774;154775;154776;154777;154778;154779 123256;123257;123258;123259;123260 123258 5 GFGFGQGAGALVHSE Unmodified 1432.6735 0.67352749 1123 P21291 CSRP1 Cysteine and glycine-rich protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 76.745 75.307 1;2 6.3369E-40 95484 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 143.89 133.06 5398500000 3080900000 1632400000 348040000 5178400 4987100 8570000 5936500 8460100 0 7988500 44106000 59179000 5767400 36989000 149950000 18480 1123 16826 154780;154781;154782;154783;154784;154785;154786;154787;154788;154789;154790;154791;154792;154793;154794;154795;154796 123261;123262;123263;123264;123265;123266;123267;123268;123269;123270;123271;123272;123273;123274;123275;123276;123277;123278;123279 123269 19 GFGFILFK Unmodified 927.52182 0.52182486 4056 Q99729 HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 91.071 91.209 2 0.020541 105607 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.714 56.26 15825000 0 0 0 0 0 1029000 498370 798630 0 0 1341500 1992600 0 1116200 9048700 18481 4056 16827 154797;154798;154799;154800;154801;154802;154803 123280 123280 1 GFGFVCFSSPEEATK Unmodified 1661.7396 0.73955814 958;2268 Q13310;P11940;Q9H361;Q4VXU2 PABPC4;PABPC1;PABPC3;PABPC1L Polyadenylate-binding protein 4;Polyadenylate-binding protein 1;Polyadenylate-binding protein 3;Polyadenylate-binding protein 1-like no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 83.578 82.2 2 9.0356E-45 99876 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 156.58 141.32 1163700000 177150000 247420000 55850000 31238000 0 2883500 40709000 0 76438000 0 72984000 129200000 80543000 80736000 168540000 18482 2268;958 16828 154804;154805;154806;154807;154808;154809;154810;154811;154812;154813;154814;154815;154816 123281;123282;123283;123284;123285;123286;123287;123288;123289;123290;123291;123292;123293 123288 9 GFGFVDFNSEEDAK Unmodified 1560.6733 0.67325272 1085 P19338 NCL Nucleolin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80.538 79.483 2 5.867E-20 91790 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 141.1 134.24 1323100000 268230000 343650000 17057000 24458000 27329000 33559000 32789000 48290000 47893000 56476000 66807000 102520000 74546000 45715000 133740000 18483 1085 16829 154817;154818;154819;154820;154821;154822;154823;154824;154825;154826;154827;154828;154829;154830;154831;154832 123294;123295;123296;123297;123298;123299;123300;123301;123302;123303;123304;123305;123306;123307;123308;123309;123310;123311;123312;123313 123300 19 GFGFVLFK Unmodified 913.50617 0.5061748 2365;236 Q14103;O14979 HNRNPD;HNRNPDL Heterogeneous nuclear ribonucleoprotein D0;Heterogeneous nuclear ribonucleoprotein D-like no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 88.696 88.767 2 0.04249 102590 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.59 42.68 99781000 0 0 0 2070100 1663000 8268000 3482300 5269900 6167200 5617000 6015200 11436000 3795200 6031000 39966000 18484 2365;236 16830 154833;154834;154835;154836;154837;154838;154839;154840;154841;154842;154843;154844 123314 123314 1 GFGFVSFER Unmodified 1044.5029 0.50288033 958 P11940;Q9H361 PABPC1;PABPC3 Polyadenylate-binding protein 1;Polyadenylate-binding protein 3 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.507 79.567 2 0.0033037 92552 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 93.374 85.105 338920000 0 0 0 18239000 14920000 36665000 16306000 20182000 25461000 34260000 23809000 48664000 25164000 27478000 47769000 18485 958 16831 154845;154846;154847;154848;154849;154850;154851;154852;154853;154854;154855;154856 123315;123316;123317;123318;123319;123320;123321;123322;123323;123324;123325 123324 11 GFGFVSFERHEDAQK Unmodified 1752.822 0.82198264 958 P11940;Q9H361 PABPC1;PABPC3 Polyadenylate-binding protein 1;Polyadenylate-binding protein 3 yes no 0 0 1 By MS/MS 10 0 1 1 62.312 62.885 3 0.00026051 71146 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.842 59.593 24329000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24329000 18486 958 16832 154857 123326;123327 123327 2 GFGFVSYEK Unmodified 1032.4916 0.49164694 2268 Q13310 PABPC4 Polyadenylate-binding protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 66.139 64.813 2 0.008436 72980 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.628 53.996 744560000 254880000 62268000 48424000 20122000 24022000 28562000 23607000 23285000 24684000 38352000 34932000 47737000 35017000 32879000 45794000 18487 2268 16833 154858;154859;154860;154861;154862;154863;154864;154865;154866;154867;154868;154869;154870;154871;154872;154873 123328;123329;123330;123331;123332;123333;123334;123335;123336;123337;123338;123339 123331 12 GFGFVTFADPASVDK Unmodified 1556.7511 0.75110911 3797 Q96DH6 MSI2 RNA-binding protein Musashi homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 87.272 87.341 2 7.8721E-07 101259 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 107.83 99.318 103400000 0 0 0 1972800 4407800 6057700 5904500 8021600 6696700 11553000 9844800 9133900 7284900 9438000 23088000 18488 3797 16834 154874;154875;154876;154877;154878;154879;154880;154881;154882;154883;154884;154885 123340;123341;123342;123343;123344;123345;123346;123347;123348;123349;123350;123351 123341 12 GFGFVTFENIDDAK Unmodified 1558.7304 0.73037367 2362 Q14011 CIRBP Cold-inducible RNA-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 86.947 87.093 2 5.0793E-05 101144 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 84.507 66.449 22882000 0 0 0 0 0 1873000 1463500 2370400 1796100 3253500 2836300 2997900 0 1274500 5016300 18489 2362 16835 154886;154887;154888;154889;154890;154891;154892;154893;154894 123352;123353;123354;123355;123356;123357;123358 123358 7 GFGFVTFENSADADR Unmodified 1631.7216 0.72159989 309 O43251;Q9NWB1 RBFOX2;RBFOX1 RNA binding protein fox-1 homolog 2;RNA binding protein fox-1 homolog 1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 81.198 81.315 2 5.5095E-05 93710 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.819 68.801 26317000 0 0 0 0 0 3803700 0 0 3489800 6085100 0 0 3447800 0 9490400 18490 309 16836 154895;154896;154897;154898;154899 123359;123360;123361;123362;123363 123361 5 GFGFVTFENSADADRAR Unmodified 1858.8598 0.85982471 309 O43251;Q9NWB1 RBFOX2;RBFOX1 RNA binding protein fox-1 homolog 2;RNA binding protein fox-1 homolog 1 yes no 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 76.195 76.366 3 0.0046728 87679 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 37.438 33.404 66805000 0 0 0 0 0 0 0 7042300 8547600 4203800 5483100 10586000 6307800 6815800 17819000 18491 309 16837 154900;154901;154902;154903;154904;154905;154906;154907 123364;123365;123366;123367 123364 3 GFGGIGGILR Unmodified 945.5396 0.53960019 1902 P62495 ETF1 Eukaryotic peptide chain release factor subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.556 77.613 2 0.0014044 88906 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.626 72.896 711810000 0 0 0 25558000 27192000 78714000 42281000 42770000 39114000 65665000 63214000 78107000 46514000 50915000 151770000 18492 1902 16838 154908;154909;154910;154911;154912;154913;154914;154915;154916;154917;154918;154919 123368;123369;123370;123371;123372;123373;123374;123375;123376;123377;123378;123379 123371 12 GFGGITHGPPEK Unmodified 1195.5986 0.59857163 1591 P49748 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 14 1 1 1 1 1 1 1 1 2 1 1 2 34.13 34.313 2;3 0.0068282 36890 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 46.159 46.159 358100000 0 0 0 24291000 17667000 18393000 24732000 23175000 20449000 33883000 62637000 44444000 23071000 20905000 44452000 18493 1591 16839 154920;154921;154922;154923;154924;154925;154926;154927;154928;154929;154930;154931;154932;154933 123380;123381;123382;123383;123384;123385;123386 123385 5 GFGHGAGLLAHQR Unmodified 1319.6847 0.6847013 2868 Q6DD87 ZNF787 Zinc finger protein 787 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 34.618 35.005 3 0.013727 36950 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 27.098 18.585 30811000 0 0 0 0 0 0 0 0 6186200 0 0 0 0 9115100 15510000 18494 2868 16840 154934;154935;154936 123387 123387 1 GFGHIGIAVPDVYSACK Unmodified 1789.8821 0.88214006 2106 Q04760 GLO1 Lactoylglutathione lyase yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 79.869 80.029 3 6.8317E-08 92122 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.281 67.981 108720000 0 0 0 0 0 0 0 0 0 1420800 7387900 11739000 0 4494500 83677000 18495 2106 16841 154937;154938;154939;154940;154941 123388;123389;123390;123391 123388 0 GFGIFVEGVEPGSK Unmodified 1421.7191 0.7190807 3520 Q8TEU7 RAPGEF6 Rap guanine nucleotide exchange factor 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.85 2.71 1 1 11 1 1 1 1 1 1 1 1 1 1 1 1 1 83.509 82.686 2 0.00081974 104621 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.04 86.327 40202000 7734000 3538400 0 1084900 1111500 2568800 1176300 2091900 1948000 2909200 2067800 3088600 2507400 0 8375100 18496 3520 16842 154942;154943;154944;154945;154946;154947;154948;154949;154950;154951;154952;154953;154954 123392;123393;123394;123395;123396;123397;123398;123399;123400 123397 9 GFGLVAYAADSSDEEEEHGGHK Unmodified 2303.9931 0.99308331 3123 Q7Z7F0 KIAA0907 UPF0469 protein KIAA0907 yes yes 0 0 0 By MS/MS 2 0 2 2 73.346 65.15 3;4 3.6439E-06 86382 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.882 52.265 28216000 28216000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18497 3123 16843 154955;154956 123401;123402 123402 1 GFGRGGAESHTFK Unmodified 1349.6476 0.64764709 1618 P50238 CRIP1 Cysteine-rich protein 1 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 18.486 19.077 3 0.0055848 18352 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.167 39.938 16425000 0 0 0 0 0 0 0 0 0 0 0 7044500 0 0 9380500 18498 1618 16844 154957;154958 123403 123403 0 GFGSEEGSR Unmodified 924.39372 0.39372381 5248 Q9Y5S9 RBM8A RNA-binding protein 8A yes yes 0 0 0 By MS/MS By MS/MS By matching By matching 10 0 4 1 1 1 1 11.013 11.37 2 0.031872 9591 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 47.574 36.758 27786000 0 0 0 0 0 0 0 0 0 0 6821500 7692800 0 4482800 8789000 18499 5248 16845 154959;154960;154961;154962 123404;123405 123405 2 GFGSVEELCTNSSLGMEK Oxidation (M) 1959.8554 0.85539254 2653 Q2NKX8 ERCC6L DNA excision repair protein ERCC-6-like yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 73.952 69.4 2 8.2107E-10 87267 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.33 88.669 19786000 0 19786000 0 0 0 0 0 0 0 0 0 0 0 0 0 18500 2653 16846 154963;154964 123406;123407;123408 123407 4318 3 GFGSVEELCTNSSLGMEK Unmodified 1943.8605 0.86047792 2653 Q2NKX8 ERCC6L DNA excision repair protein ERCC-6-like yes yes 0 0 0 By MS/MS 2 0 1 1 79.355 74.62 2 7.8698E-118 92979 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 262.64 251.07 48754000 0 48754000 0 0 0 0 0 0 0 0 0 0 0 0 0 18501 2653 16846 154965 123409 123409 1 GFGTDEQAIIDCLGSRSNK Unmodified 2066.9691 0.96911716 1643 P50995 ANXA11 Annexin A11 yes yes 0 0 1 By MS/MS 2 0 1 1 83.737 79.017 3 0.00067136 98319 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 53.21 45.124 17609000 0 17609000 0 0 0 0 0 0 0 0 0 0 0 0 0 18502 1643 16847 154966 123410 123410 1 GFGTDEQAIVDVVANR Unmodified 1689.8322 0.83221298 1100 P20073 ANXA7 Annexin A7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 2 2 1 2 84.289 83.777 2;3 7.719E-05 96260 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 75.78 66.093 53532000 0 9273100 0 0 0 7197700 0 0 0 15057000 0 0 0 2923000 19081000 18503 1100 16848 154967;154968;154969;154970;154971;154972;154973;154974 123411;123412;123413;123414;123415 123415 5 GFGTEVTEK Unmodified 966.46583 0.46582612 4503 Q9HBU6 ETNK1 Ethanolamine kinase 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 32.459 27.952 2 0.026457 36391 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.628 35.624 54240000 0 54240000 0 0 0 0 0 0 0 0 0 0 0 0 0 18504 4503 16849 154975;154976 123416 123416 1 GFGYGQGAGALVHAQ Unmodified 1431.6895 0.6895119 2607 Q16527 CSRP2 Cysteine and glycine-rich protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 69.408 63.78 2 0.000843 82200 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.4 99.727 339040000 244760000 69855000 24422000 0 0 0 0 0 0 0 0 0 0 0 0 18505 2607 16850 154977;154978;154979;154980 123417;123418;123419;123420;123421 123418 5 GFHQEVFLGK Unmodified 1160.5978 0.59784335 4110 Q9BRK5 SDF4 45 kDa calcium-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 51.035 50.978 3 0.019711 57472 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 33.039 20.461 28296000 0 0 0 0 6438100 0 10805000 0 0 0 0 0 11053000 0 0 18506 4110 16851 154981;154982;154983 123422 123422 1 GFIDDDK Unmodified 808.3603 0.36029842 3702 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 28.465 24.549 2 0.013643 30649 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 122.15 66.128 418050000 0 412140000 5914300 0 0 0 0 0 0 0 0 0 0 0 0 18507 3702 16852 154984;154985;154986 123423;123424 123424 2 GFIGPGIDVPAPDMSTGER Oxidation (M) 1930.9095 0.90947702 721 P00367 GLUD1 Glutamate dehydrogenase 1, mitochondrial yes yes 0 1 0 By MS/MS By matching 10 0 2 1 1 79.73 79.929 2 0.0013174 92143 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 41.644 32.915 10647000 0 0 0 0 0 0 5993000 0 0 0 0 0 0 0 4653800 18508 721 16853 154987;154988 123425 123425 867 1 GFIIQPDSSIVVK Unmodified 1401.7868 0.78676633 3657 Q92766 RREB1 Ras-responsive element-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81.662 81.197 2 0.019523 93909 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 54.539 23.118 145640000 0 20211000 1611000 5094700 6109700 12709000 6606700 9248200 10636000 11755000 9236600 8902600 7757800 12733000 23027000 18509 3657 16854 154989;154990;154991;154992;154993;154994;154995;154996;154997;154998;154999;155000;155001;155002 123426;123427;123428;123429;123430 123429 2 GFIMAEVMK Unmodified 1024.5086 0.50855934 4636 Q9NTK5 OLA1 Obg-like ATPase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 6.71 3.81 2 1 4 1 1 1 1 1 1 1 79.609 77.709 2 0.0081255 88867 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.525 58.094 248260000 212660000 4770200 7985200 0 0 8520700 0 2491200 0 0 2805500 0 0 0 9022100 18510 4636 16855 155003;155004;155005;155006;155007;155008;155009 123431;123432;123433;123434;123435 123432 5 GFIMAEVMK Oxidation (M) 1040.5035 0.50347396 4636 Q9NTK5 OLA1 Obg-like ATPase 1 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 68.067 62.788 2 0.013294 80713 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.191 59.644 37929000 0 37929000 0 0 0 0 0 0 0 0 0 0 0 0 0 18511 4636 16855 155010;155011 123436;123437 123436 6042;6043 2 GFIMAEVMK 2 Oxidation (M) 1056.4984 0.49838858 4636 Q9NTK5 OLA1 Obg-like ATPase 1 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 51.882 46.268 2 0.018594 47064 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 73.26 51.129 221790000 89623000 82568000 49602000 0 0 0 0 0 0 0 0 0 0 0 0 18512 4636 16855 155012;155013;155014;155015;155016 123438;123439;123440;123441;123442 123439 6042;6043 1 GFINMPSVAK Oxidation (M) 1078.5481 0.54811597 3631 Q92576 PHF3 PHD finger protein 3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 46.97 47.254 2 0.016424 53244 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 44.753 33.684 11001000 0 0 0 0 0 3048700 2875500 0 0 0 0 0 0 0 5076500 18513 3631 16856 155017;155018;155019 123443 123443 5128 1 GFINMPSVAK Unmodified 1062.5532 0.55320134 3631 Q92576 PHF3 PHD finger protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 72.462 71.741 2 0.020509 82628 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 47.198 24.458 55238000 11650000 0 0 0 2941000 4958600 3379900 3450200 3407300 4936100 5921400 0 5647200 0 8946100 18514 3631 16856 155020;155021;155022;155023;155024;155025;155026;155027;155028;155029 123444;123445;123446;123447;123448 123446 5 GFINMQSVAK Oxidation (M) 1109.5539 0.55392962 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 39.182 39.4 2 0.0055646 42579 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 60.019 40.505 117970000 0 0 0 8694600 0 10005000 11883000 11247000 9683300 13243000 0 16972000 14719000 10264000 11261000 18515 4139 16857 155030;155031;155032;155033;155034;155035;155036;155037;155038;155039 123449;123450;123451;123452;123453;123454;123455;123456;123457;123458 123455 5626 10 GFINMQSVAK Unmodified 1093.559 0.559015 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 61.987 62.086 2 0.0014466 70772 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 91.069 48.154 159800000 0 0 0 7276100 7364600 13599000 8330900 13826000 8437400 16011000 15386000 19906000 16824000 13454000 19384000 18516 4139 16857 155040;155041;155042;155043;155044;155045;155046;155047;155048;155049;155050;155051;155052 123459;123460;123461;123462;123463;123464;123465;123466;123467;123468;123469;123470 123464 12 GFLDLNR Unmodified 833.43955 0.43955179 4939 Q9UJK0 TSR3 Ribosome biogenesis protein TSR3 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 63.243 63.319 2 0.03046 72274 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 74.717 29.744 64334000 0 0 0 4358500 3528900 8650000 5860600 0 3919200 9845300 5594900 6199200 6778200 0 9599700 18517 4939 16858 155053;155054;155055;155056;155057;155058;155059;155060;155061;155062 123471 123471 1 GFLEDLAPPER Unmodified 1242.6245 0.62445203 1707 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.203 79.25 2 0.00064815 91536 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 93.649 69.694 97426000 0 0 0 8159200 3326000 9287300 5366500 12152000 6600400 10491000 0 10199000 7351200 7231800 17262000 18518 1707 16859 155063;155064;155065;155066;155067;155068;155069;155070;155071;155072;155073 123472;123473;123474;123475;123476;123477;123478;123479;123480;123481;123482;123483 123473 11 GFLIDGYPR Unmodified 1036.5342 0.53418046 734 P00568;Q9Y6K8 AK1;AK5 Adenylate kinase isoenzyme 1;Adenylate kinase isoenzyme 5 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 2 1 1 1 1 1 73.785 73.841 2 0.015689 84986 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 57.177 36.657 127110000 0 0 0 4742800 3788100 16596000 7597300 6214500 8561100 11292000 16015000 0 8445800 10885000 32974000 18519 734 16860 155074;155075;155076;155077;155078;155079;155080;155081;155082;155083;155084;155085 123484;123485;123486;123487;123488;123489;123490;123491;123492 123485 9 GFLNSSELSGLPAGPDREGSLK Unmodified 2230.123 0.12297527 1483 P43897 TSFM Elongation factor Ts, mitochondrial yes yes 0 0 1 By MS/MS 2 0 1 1 84.931 76.801 3 0.001073 100218 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.31 43.317 49151000 49151000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18520 1483 16861 155086 123493;123494 123493 2 GFLQGAPAGGEK Unmodified 1130.572 0.57202253 4900 Q9UHF7 TRPS1 Zinc finger transcription factor Trps1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.83 2.61 1 5 1 1 1 1 1 1 45.143 42.837 2 0.00094109 53318 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 90.15 81.205 12167000 0 7154600 0 0 0 0 0 0 0 0 0 0 0 5012800 0 18521 4900 16862 155087;155088;155089;155090;155091;155092 123495;123496;123497;123498;123499;123500;123501 123497 7 GFMEDEGRQR Unmodified 1223.5353 0.53531945 2189 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 21.853 22.131 3 0.013011 22592 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 37.717 31.423 38765000 0 0 0 4934800 0 5696300 0 0 4290300 5335700 4105600 6368300 0 0 8034000 18522 2189 16863 155093;155094;155095;155096;155097;155098;155099 123502;123503 123502 2 GFMTAHGQPDQPR Unmodified 1440.6568 0.65683157 4317 Q9H089 LSG1 Large subunit GTPase 1 homolog yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching 10 0 5 1 1 1 1 1 30.254 30.378 3 0.0094012 32541 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 32.734 24.005 24265000 0 0 0 4389400 0 5883700 0 0 0 5627500 3821000 0 0 4543800 0 18523 4317 16864 155100;155101;155102;155103;155104 123504 123504 1 GFNDGLEELCK Unmodified 1280.5707 0.5707019 5058 Q9UPT5 EXOC7 Exocyst complex component 7 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 7.86 3.4 1 1 5 2 1 1 1 1 1 67.145 65.661 2 0.0070295 75606 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 55.064 47.259 86714000 0 69112000 0 0 2477400 0 3045400 0 3415600 3697900 0 0 4965000 0 0 18524 5058 16865 155105;155106;155107;155108;155109;155110;155111 123505;123506;123507 123505 2 GFNEGLWEIDNNPK Unmodified 1631.758 0.7579854 505 O75475 PSIP1 PC4 and SFRS1-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 4 1 1 2 80.647 76.835 2 2.7683E-05 98714 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 127.83 115.25 352640000 17158000 328390000 7096900 0 0 0 0 0 0 0 0 0 0 0 0 18525 505 16866 155112;155113;155114;155115 123508;123509;123510 123509 2 GFNGCDSPEPDGEDSLEQSPLLEDK Unmodified 2734.1552 0.15519919 2450 Q14814 MEF2D Myocyte-specific enhancer factor 2D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 77.426 77.573 3 4.3214E-15 89192 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.435 68.253 89328000 0 0 0 0 0 8108500 7478000 6140700 6902700 8980500 8258000 14010000 7944500 9197100 12308000 18526 2450 16867 155116;155117;155118;155119;155120;155121;155122;155123;155124;155125 123511;123512;123513;123514;123515;123516;123517;123518;123519;123520;123521 123515 11 GFNLNPLNQDELK Unmodified 1500.7573 0.75725712 4643 Q9NUG6 PDRG1 p53 and DNA damage-regulated protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 83.323 79.821 2 3.508E-18 95489 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 146.11 121.33 271820000 0 269080000 2746100 0 0 0 0 0 0 0 0 0 0 0 0 18527 4643 16868 155126;155127;155128 123522;123523;123524 123523 3 GFNLPYQDAR Unmodified 1179.5673 0.5672715 3421 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 65.043 64.938 2 0.013776 74169 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 51.066 42.153 34304000 0 0 0 6930500 0 9805100 10031000 0 7537300 0 0 0 0 0 0 18528 3421 16869 155129;155130;155131;155132 123525;123526;123527;123528 123526 4 GFNLPYQDARK Unmodified 1307.6622 0.66223452 3421 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 52.322 52.698 3 0.022454 59036 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 21.656 14.089 15394000 0 0 0 0 0 3465400 0 0 0 0 0 11928000 0 0 0 18529 3421 16870 155133;155134 123529 123529 1 GFNPAQPLNIR Unmodified 1225.6568 0.65675521 2184 Q12769 NUP160 Nuclear pore complex protein Nup160 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 71.313 71.361 2 0.0030999 81154 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 82.279 59.566 85207000 0 0 0 7211600 4594600 9647500 6519900 7599400 4323900 8900000 7684100 0 7866500 8612500 12247000 18530 2184 16871 155135;155136;155137;155138;155139;155140;155141;155142;155143;155144;155145 123530;123531 123531 2 GFNPEVEK Unmodified 918.4447 0.44469675 4022 Q99547 MPHOSPH6 M-phase phosphoprotein 6 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching 10 0 5 1 1 1 1 1 30.705 30.928 2 0.044838 34256 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 48.756 19.379 23648000 0 0 0 0 3382000 0 3120700 0 0 0 4503100 0 0 3815200 8827200 18531 4022 16872 155146;155147;155148;155149;155150 123532 123532 1 GFPALSQK Unmodified 846.45995 0.45995289 5293;1597 P49757;Q9Y6R0 NUMB;NUMBL Protein numb homolog;Numb-like protein no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 44.004 44.243 2 0.030197 49578 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 55.676 30.678 292600000 0 0 0 0 18071000 17237000 20728000 15193000 17469000 30255000 39596000 33348000 27381000 23820000 49507000 18532 1597;5293 16873 155151;155152;155153;155154;155155;155156;155157;155158;155159;155160;155161 123533;123534 123534 2 GFPTDATLDDIK Unmodified 1291.6296 0.62959699 811 P05455 SSB Lupus La protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 4 2 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 73.666 72.416 2 0.00069637 87952 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 96.342 85.534 3809200000 106730000 3305600000 27258000 18057000 16783000 12840000 16260000 18188000 15040000 24788000 48304000 38879000 35594000 47489000 77377000 18533 811 16874 155162;155163;155164;155165;155166;155167;155168;155169;155170;155171;155172;155173;155174;155175;155176;155177;155178;155179 123535;123536;123537;123538;123539;123540;123541;123542;123543;123544;123545;123546;123547;123548;123549;123550;123551;123552;123553;123554 123548 17 GFPTIYFSPANK Unmodified 1340.6765 0.6764876 1270 P30101 PDIA3 Protein disulfide-isomerase A3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.581 81.642 2 4.2396E-06 93982 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 111.06 100.79 741180000 0 0 0 15566000 25603000 27160000 21560000 32209000 22399000 36284000 93377000 81634000 21590000 68340000 295460000 18534 1270 16875 155180;155181;155182;155183;155184;155185;155186;155187;155188;155189;155190;155191 123555;123556;123557;123558;123559;123560;123561;123562;123563;123564;123565;123566;123567;123568 123557 14 GFPVLLHYQTVSEPAVIK Unmodified 1997.0986 0.098598418 5184 Q9Y450 HBS1L HBS1-like protein yes yes 0 0 0 By MS/MS 2 0 1 1 91.481 83.35 3 0.0039336 108215 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 39.338 30.738 9091400 9091400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18535 5184 16876 155192 123569 123569 1 GFPWDEYK Unmodified 1040.4603 0.46034682 5037 Q9UNN5 FAF1 FAS-associated factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 75.207 74.683 2 0.025168 85545 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.917 46.561 201150000 0 126180000 6653300 2674600 2139600 8377500 3766100 5781900 0 6797800 7125400 7888900 3881800 5363800 14522000 18536 5037 16877 155193;155194;155195;155196;155197;155198;155199;155200;155201;155202;155203;155204;155205 123570;123571;123572;123573;123574;123575 123572 6 GFQEGPLNFAPTFK Unmodified 1551.7722 0.7721789 2568 Q15735 INPP5J Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 2 1 1 1 1 1 1 85.602 85.679 2 4.043E-08 99030 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.113 83.498 33508000 0 0 0 0 2468400 5037500 0 0 0 6293600 3616700 4440700 1961400 2614200 7075600 18537 2568 16878 155206;155207;155208;155209;155210;155211;155212;155213;155214;155215 123576;123577;123578;123579;123580;123581;123582;123583 123578 8 GFQEVVTPNIFNSR Unmodified 1606.8104 0.81035532 1209 P26639 TARS Threonine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 82.815 82.865 2 1.0419E-19 96120 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 138.25 138.25 118470000 0 0 0 716830 2100600 2204700 1981900 2899300 0 3927300 15749000 14605000 0 12640000 61642000 18538 1209 16879 155216;155217;155218;155219;155220;155221;155222;155223;155224;155225 123584;123585;123586;123587;123588;123589;123590;123591 123591 8 GFQVAPEHHNDHK Unmodified 1514.7015 0.70147357 1126 P21399 ACO1 Cytoplasmic aconitate hydratase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 16.046 14.699 3 0.00078103 22969 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.534 57.164 73691000 58807000 0 0 0 0 0 0 0 0 0 0 0 0 3041100 11842000 18539 1126 16880 155226;155227;155228 123592;123593 123593 2 GFRDEPYFK Unmodified 1157.5506 0.55055881 3466 Q8NI35 INADL InaD-like protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 45.908 46.456 3 0.042641 51750 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 32.415 23.057 12001000 0 0 0 0 0 0 0 0 2397300 0 0 4384400 0 0 5219000 18540 3466 16881 155229;155230;155231 123594 123594 1 GFSASSAR Unmodified 781.37187 0.37186616 66 CON__P04259 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 12.499 12.596 2 0.01982 11560 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 63.306 51.657 + 51214000 0 0 0 6937400 1681600 903370 2496300 5734400 0 3225300 1958300 0 27605000 671780 0 18541 66 16882 155232;155233;155234;155235;155236;155237;155238;155239;155240 123595;123596;123597 123597 2 GFSDEDNTWEPEENLDCPDLIAEFLQSQK Unmodified 3425.4882 0.48816065 2009 P83916 CBX1 Chromobox protein homolog 1 yes yes 0 0 0 By MS/MS 2 0 1 1 98.948 96.521 3 0.0023818 116677 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 28.59 26.708 2336900 0 0 2336900 0 0 0 0 0 0 0 0 0 0 0 0 18542 2009 16883 155241 123598 123598 1 GFSEEHNTWEPEK Unmodified 1588.6794 0.67940073 1487 P45973 CBX5 Chromobox protein homolog 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 4 1 1 2 46.06 40.856 2;3 0.0019293 51183 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 90.793 85.073 67619000 3787000 30158000 33675000 0 0 0 0 0 0 0 0 0 0 0 0 18543 1487 16884 155242;155243;155244;155245 123599;123600;123601;123602 123602 3 GFSEGLWEIENNPTVK Unmodified 1818.8788 0.87882882 1674 P51858 HDGF Hepatoma-derived growth factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.86 3.47 6 2 21 1 5 2 1 2 2 1 2 2 2 2 2 1 2 2 83.959 82.978 2;3 3.2554E-43 103662 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 188.29 159.33 4592400000 100190000 3368200000 616720000 2857600 9839200 11374000 4461700 21544000 13228000 25965000 73378000 84529000 5783600 46075000 208260000 18544 1674 16885 155246;155247;155248;155249;155250;155251;155252;155253;155254;155255;155256;155257;155258;155259;155260;155261;155262;155263;155264;155265;155266;155267;155268;155269;155270;155271;155272;155273;155274 123603;123604;123605;123606;123607;123608;123609;123610;123611;123612;123613;123614;123615;123616;123617;123618;123619;123620;123621;123622;123623 123605 18 GFSEGTASTFDYSLK Unmodified 1608.7308 0.7307676 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 74.397 72.92 2 1.0734E-26 84150 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 140.39 118.93 67926000 0 37101000 0 0 0 0 0 0 0 17053000 13772000 0 0 0 0 18545 3023 16886 155275;155276;155277 123624;123625;123626 123626 3 GFSESER Unmodified 810.3508 0.35079637 3043 Q7L1Q6 BZW1 Basic leucine zipper and W2 domain-containing protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 10.662 10.778 2 0.022748 9286 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 104.11 73.442 183920000 0 0 0 13036000 12598000 22813000 15500000 14946000 8987300 18278000 0 15519000 15974000 15118000 31155000 18546 3043 16887 155278;155279;155280;155281;155282;155283;155284;155285;155286;155287;155288 123627;123628;123629;123630 123629 3 GFSESERNK Unmodified 1052.4887 0.48868683 3043 Q7L1Q6 BZW1 Basic leucine zipper and W2 domain-containing protein 1 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 8.0086 4.7056 2 8.5961E-06 6541 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 163.9 119.5 101430000 0 101430000 0 0 0 0 0 0 0 0 0 0 0 0 0 18547 3043 16888 155289;155290 123631 123631 1 GFSIPECQK Unmodified 1064.4961 0.4960804 490 O75390 CS Citrate synthase, mitochondrial yes yes 0 0 0 By MS/MS 10 0 1 1 47.607 48.338 2 0.022769 53506 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.335 33.011 7527700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7527700 18548 490 16889 155291 123632 123632 1 GFSLEELR Unmodified 949.4869 0.48689592 1203 P26373 RPL13 60S ribosomal protein L13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 2 2 1 1 1 1 1 1 72.266 72.352 2 0.0057923 83592 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 117.93 69.76 612430000 0 0 0 36150000 33632000 39532000 37068000 37267000 37653000 51666000 53338000 72763000 72304000 61272000 79785000 18549 1203 16890 155292;155293;155294;155295;155296;155297;155298;155299;155300;155301;155302;155303;155304;155305 123633;123634;123635;123636;123637;123638;123639;123640;123641;123642 123641 5 GFSLESCR Unmodified 954.42292 0.42291545 841 P07384 CAPN1 Calpain-1 catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.571 41.749 2 0.01743 45931 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 65.676 56.854 158390000 0 0 0 16032000 6433800 10755000 11795000 10515000 8059900 9645700 18693000 16320000 16167000 11244000 22731000 18550 841 16891 155306;155307;155308;155309;155310;155311;155312;155313;155314;155315;155316;155317 123643;123644;123645;123646;123647;123648 123647 5 GFSLESFR Unmodified 941.46068 0.46068117 4388 Q9H410 DSN1 Kinetochore-associated protein DSN1 homolog yes yes 0 0 0 By MS/MS 10 0 1 1 73.085 73.455 2 0.034336 84151 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.166 41.871 10271000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10271000 18551 4388 16892 155318 123649 123649 1 GFSLLATEDK Unmodified 1079.5499 0.5498901 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.55 3.8 3 2 6 2 2 1 1 1 1 1 1 1 71.057 67.364 2 2.1105E-06 85737 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 149.94 125.73 1646000000 94638000 1244200000 76291000 0 0 95213000 0 0 0 0 135650000 0 0 0 0 18552 894 16893 155319;155320;155321;155322;155323;155324;155325;155326;155327;155328;155329 123650;123651;123652;123653;123654;123655;123656;123657;123658;123659;123660;123661;123662;123663 123652 14 GFSLSDVPQAEISGEHLR Unmodified 1940.9592 0.9592044 1339 P35052 GPC1 Glypican-1;Secreted glypican-1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 78.454 78.449 3 0.00096784 90657 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 33.836 23.778 17842000 0 0 0 0 1884600 5122800 0 0 3727700 7107200 0 0 0 0 0 18553 1339 16894 155330;155331;155332;155333;155334 123664;123665;123666;123667 123664 4 GFSPQHK Unmodified 799.39769 0.39768698 2151 Q08209 PPP3CA Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform yes yes 0 0 0 By MS/MS 2 0 1 1 7.1948 4.9676 2 0.039683 6832 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 81.1 65.879 130990000 0 0 130990000 0 0 0 0 0 0 0 0 0 0 0 0 18554 2151 16895 155335 123668 123668 1 GFSSGSAVVSGGSR Unmodified 1253.6 0.60002819 79 CON__P35908v2;P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 2 2 1 1 1 1 2 2 2 2 2 1 32.63 32.809 2 1.1791E-11 36046 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 120.96 101.69 + 8461800000 0 0 0 1271800000 518460000 672640000 517640000 1149500000 356940000 652220000 824830000 971590000 840420000 366400000 319370000 18555 79 16896 155336;155337;155338;155339;155340;155341;155342;155343;155344;155345;155346;155347;155348;155349;155350;155351;155352;155353;155354 123669;123670;123671;123672;123673;123674;123675;123676;123677;123678;123679;123680;123681;123682;123683;123684;123685;123686;123687;123688;123689;123690;123691;123692 123680 24 GFSSGSAVVSGGSRR Unmodified 1409.7011 0.70113922 79 CON__P35908v2;P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 25.918 26.118 2;3 6.3338E-113 28121 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 218.18 203.03 + 2967800000 0 0 0 293950000 182060000 256590000 140620000 409880000 143920000 256120000 219600000 479500000 336580000 122490000 126500000 18556 79 16897 155355;155356;155357;155358;155359;155360;155361;155362;155363;155364;155365;155366;155367;155368;155369;155370;155371;155372;155373;155374;155375;155376;155377;155378 123693;123694;123695;123696;123697;123698;123699;123700;123701;123702;123703;123704;123705;123706;123707;123708;123709;123710;123711;123712;123713;123714;123715;123716;123717;123718 123716 17 GFSVVADTPELQR Unmodified 1417.7201 0.72014333 2452 Q14847 LASP1 LIM and SH3 domain protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 72.234 71.527 2 3.084E-25 81565 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 159.83 141.96 694600000 0 175680000 8332700 8658000 11070000 13236000 13988000 14279000 9558500 18325000 105770000 79989000 14228000 63125000 158370000 18557 2452 16898 155379;155380;155381;155382;155383;155384;155385;155386;155387;155388;155389;155390;155391;155392;155393;155394 123719;123720;123721;123722;123723;123724;123725;123726;123727;123728;123729;123730;123731;123732;123733;123734;123735 123724 17 GFSVVADTPELQRIK Unmodified 1658.8992 0.89917033 2452 Q14847 LASP1 LIM and SH3 domain protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 6 2 4 2 2 79.827 74.621 2;3 2.6567E-18 95530 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 123.67 114.24 1413600000 1209800000 168580000 35235000 0 0 0 0 0 0 0 0 0 0 0 0 18558 2452 16899 155395;155396;155397;155398;155399;155400;155401;155402 123736;123737;123738;123739;123740;123741;123742 123740 6 GFTAAGVLAAHK Unmodified 1141.6244 0.62439245 1320 P32322 PYCR1 Pyrroline-5-carboxylate reductase 1, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 64.628 56.349 3 0.0076194 75767 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 38.238 28.35 7288600 7288600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18559 1320 16900 155403 123743 123743 1 GFTDADNTWEPEENLDCPELIEAFLNSQK Unmodified 3381.4983 0.4983314 2249 Q13185 CBX3 Chromobox protein homolog 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.5 0.5 2 2 2 1 1 99.313 94.955 3 3.2675E-67 118220 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 121.26 116.45 124030000 105750000 6782600 11491000 0 0 0 0 0 0 0 0 0 0 0 0 18560 2249 16901 155404;155405;155406;155407 123744;123745;123746;123747;123748 123747 5 GFTESFGAANISQAAR Unmodified 1625.7798 0.77978347 2189 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.995 71.069 2 1.0106E-21 81062 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 117.79 105.58 134830000 0 0 0 7853300 8569800 11890000 8636900 7378400 6864900 13823000 13740000 15851000 12237000 9325900 18659000 18561 2189 16902 155408;155409;155410;155411;155412;155413;155414;155415;155416;155417;155418;155419 123749;123750;123751;123752;123753;123754;123755;123756;123757;123758;123759;123760 123752 12 GFTGIDSDYEK Unmodified 1230.5404 0.54044763 642 O95340 PAPSS2 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 52.686 47.342 2 0.037895 61216 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 50.297 28.6 115960000 0 115960000 0 0 0 0 0 0 0 0 0 0 0 0 0 18562 642 16903 155420;155421 123761 123761 1 GFTGIDSDYEKPETPER Unmodified 1939.88 0.87995103 642 O95340 PAPSS2 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 1 2 1 1 1 1 2 2 2 2 2 53.836 54.053 2;3 2.3236E-28 61120 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 112.34 104.15 472470000 0 0 0 28006000 16760000 44142000 47805000 29609000 29961000 36467000 53136000 58593000 33321000 31856000 62819000 18563 642 16904 155422;155423;155424;155425;155426;155427;155428;155429;155430;155431;155432;155433;155434;155435;155436;155437;155438;155439 123762;123763;123764;123765;123766;123767;123768;123769;123770;123771;123772;123773;123774;123775;123776;123777;123778;123779;123780;123781 123772 20 GFTGIDSDYEKPETPERVLK Unmodified 2280.1274 0.12739194 642 O95340 PAPSS2 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes yes 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 71.041 65.102 4 0.0062932 80651 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 38.915 35.367 140660000 120810000 0 19853000 0 0 0 0 0 0 0 0 0 0 0 0 18564 642 16905 155440;155441 123782;123783 123783 1 GFTGIDSEYEKPEAPELVLK Unmodified 2221.1154 0.11543027 310 O43252 PAPSS1 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.69 3.47 2 2 9 2 1 1 1 1 1 1 1 1 1 1 1 80.85 79.605 3 2.9278E-23 95448 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 108.71 100.62 188590000 40810000 54991000 16525000 0 0 7064800 1776800 5282500 4297300 8607000 7022200 9748100 0 6433000 26034000 18565 310 16906 155442;155443;155444;155445;155446;155447;155448;155449;155450;155451;155452;155453;155454 123784;123785;123786;123787;123788;123789;123790;123791;123792;123793 123788 10 GFTGNTEGSVLK Unmodified 1208.6037 0.60371659 2859 Q68DQ2 CRYBG3 Very large A-kinase anchor protein yes yes 0 0 0 By MS/MS 2 0 1 1 48.474 42.827 2 3.0122E-05 55871 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.42 78.484 30518000 0 30518000 0 0 0 0 0 0 0 0 0 0 0 0 0 18566 2859 16907 155455 123794;123795 123794 2 GFTIPEAFR Unmodified 1036.5342 0.53418046 140 O00299 CLIC1 Chloride intracellular channel protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 79.825 79.864 2 0.0071283 92384 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 73.248 32.98 110220000 0 0 0 3663300 1732600 2572600 3271000 5029600 0 0 14512000 14582000 0 13673000 51188000 18567 140 16908 155456;155457;155458;155459;155460;155461;155462;155463;155464 123796;123797;123798;123799;123800;123801;123802 123797 7 GFTQDFK Unmodified 841.39702 0.39701828 312 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.399 37.579 2 0.046966 41885 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 65.672 35.865 104680000 0 0 0 5683200 4754200 9992100 6925300 7087700 6321500 7030700 9846800 16023000 9938600 7254700 13819000 18568 312 16909 155465;155466;155467;155468;155469;155470;155471;155472;155473;155474;155475;155476 123803 123803 1 GFTSASTQEMTVHLLSK Unmodified 1835.9087 0.90874874 603 O94915 FRYL Protein furry homolog-like yes yes 0 0 0 By MS/MS 2 0 1 1 81.706 73.576 3 0.0045142 96434 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 41.422 28.63 10576000 10576000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18569 603 16910 155477 123804 123804 1 GFTVMNENER Unmodified 1195.5292 0.52917144 1577 P49585 PCYT1A Choline-phosphate cytidylyltransferase A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 42.227 42.468 2 0.010197 46281 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.432 39.892 45894000 0 0 0 0 2577600 4102200 3294100 3698600 2159500 6071200 5604200 5574700 4433500 3364100 5014100 18570 1577 16911 155478;155479;155480;155481;155482;155483;155484;155485;155486;155487;155488 123805;123806;123807;123808;123809;123810;123811;123812;123813;123814;123815 123808 11 GFVEFAAKPPARK Unmodified 1416.7878 0.78776939 3589 Q8WXF1 PSPC1 Paraspeckle component 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 47.367 47.676 3 0.010175 52267 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.924 56.975 84834000 0 0 0 0 0 6266400 4936700 7099800 4016300 7758600 8322500 8865800 10775000 7117200 19676000 18571 3589 16912 155489;155490;155491;155492;155493;155494;155495;155496;155497;155498 123816;123817;123818 123817 2 GFVEIQTPK Unmodified 1017.5495 0.54949617 1009 P14868 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 58.822 57.39 2 0.0013351 76874 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 119.17 99.251 946380000 65506000 606110000 19910000 10557000 14625000 28409000 16395000 15687000 0 23234000 30715000 31315000 18212000 20669000 45035000 18572 1009 16913 155499;155500;155501;155502;155503;155504;155505;155506;155507;155508;155509;155510;155511;155512;155513 123819;123820;123821;123822;123823;123824;123825;123826;123827;123828;123829;123830;123831;123832;123833;123834;123835;123836;123837;123838;123839;123840 123826 22 GFVEPDHYVVVGAQR Unmodified 1671.8369 0.83690442 762 P02786 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.401 65.488 3 4.6694E-10 74735 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 94.728 89.868 208400000 0 0 0 9674400 12785000 17957000 13554000 17547000 13334000 19171000 16770000 30058000 17622000 18718000 21207000 18573 762 16914 155514;155515;155516;155517;155518;155519;155520;155521;155522;155523;155524;155525 123841;123842;123843;123844;123845;123846;123847;123848;123849;123850;123851;123852;123853;123854 123845 14 GFVPETTK Unmodified 877.45453 0.45453316 1088 P19419 ELK1 ETS domain-containing protein Elk-1 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 32.466 32.673 2 0.013906 35479 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 71.342 37.985 75951000 0 0 0 8992700 0 8124000 9796900 7494900 5527900 7182600 0 9833300 10372000 0 8626200 18574 1088 16915 155526;155527;155528;155529;155530;155531;155532;155533;155534 123855;123856;123857;123858;123859;123860;123861 123858 6 GFVPNMQVEGVFYVNDALEK Unmodified 2255.0933 0.093255043 5168 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog yes yes 0 0 0 By MS/MS 2 0 1 1 97.046 88.916 2 1.9497E-91 114829 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 163.23 136.13 15183000 15183000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18575 5168 16916 155535 123862;123863 123862 2 GFVPSPTSQPGGHESLVDR Unmodified 1965.9545 0.95445338 1210 P26640 VARS Valine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.275 59.385 3 6.295E-06 68088 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 68.567 57.751 412810000 0 0 0 10287000 17455000 56804000 22949000 19841000 12467000 49400000 43296000 35228000 21325000 43312000 80450000 18576 1210 16917 155536;155537;155538;155539;155540;155541;155542;155543;155544;155545;155546;155547 123864;123865;123866;123867;123868;123869;123870;123871;123872;123873;123874;123875;123876 123876 13 GFVQVDDGRK Unmodified 1119.5673 0.5672715 1733 P54136 RARS Arginine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 26.648 26.984 2 0.012123 29153 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 92.439 65.309 65296000 0 0 0 0 0 7083700 4306100 0 0 7681600 7301400 17235000 7192200 5380200 9116100 18577 1733 16918 155548;155549;155550;155551;155552;155553;155554;155555 123877;123878;123879;123880;123881;123882 123877 6 GFVTGGADK Unmodified 850.41848 0.418482 5044 Q9UNX4 WDR3 WD repeat-containing protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 18.592 18.991 2 0.018695 19308 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 54.611 31.682 11465000 0 0 0 0 0 0 0 0 0 0 0 4148900 4471200 2844900 0 18578 5044 16919 155556;155557;155558 123883;123884;123885 123884 3 GFVVINQK Unmodified 903.5178 0.51780212 1410 P40227;Q92526 CCT6A;CCT6B T-complex protein 1 subunit zeta;T-complex protein 1 subunit zeta-2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 4 2 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 48.226 46.776 2 0.0023877 51881 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 109.7 55.994 4602200000 2176900000 837730000 127710000 61991000 67463000 169440000 103920000 97056000 77263000 151890000 150890000 160850000 107010000 100320000 211780000 18579 1410 16920 155559;155560;155561;155562;155563;155564;155565;155566;155567;155568;155569;155570;155571;155572;155573;155574;155575;155576 123886;123887;123888;123889;123890;123891;123892;123893;123894;123895;123896;123897;123898;123899;123900;123901;123902;123903;123904;123905;123906;123907;123908;123909;123910 123900 24 GFVYSSFLK Unmodified 1046.5437 0.54368251 2993 Q6XZF7 DNMBP Dynamin-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.54 79.596 2 0.040202 92404 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 44.447 25.665 60149000 0 0 0 3001200 3059100 5976100 3580600 5873300 4141400 0 5932600 8391300 5163400 4949400 10081000 18580 2993 16921 155577;155578;155579;155580;155581;155582;155583;155584;155585;155586;155587 123911;123912;123913;123914 123914 4 GFYEGIMLVDGFK Oxidation (M) 1490.7116 0.71155248 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 91.829 88.137 2 0.0026133 109709 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.944 60.265 30511000 0 29276000 1235300 0 0 0 0 0 0 0 0 0 0 0 0 18581 4819 16922 155588;155589 123915 123915 6185 1 GFYEGIMLVDGFK Unmodified 1474.7166 0.71663786 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS 2 0 1 1 97.039 88.908 2 0.0027615 114865 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.332 59.663 9989800 9989800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18582 4819 16922 155590 123916 123916 1 GFYPQSHQEPVK Unmodified 1415.6834 0.68336389 900 P0C7T5 ATXN1L Ataxin-1-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 33.035 33.281 3 0.0041344 35804 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 41.401 34.669 71210000 0 0 0 0 4761700 3539600 6566400 0 3187900 8273400 10401000 11054000 6782500 4716300 11928000 18583 900 16923 155591;155592;155593;155594;155595;155596;155597;155598;155599;155600 123917;123918;123919 123919 3 GFYSNGAASSVSTK Unmodified 1374.6416 0.64155866 1349 P35251 RFC1 Replication factor C subunit 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 36.755 36.318 2 0.00042203 40294 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 70.942 62.248 47686000 11055000 0 0 1542600 2371900 2955500 4905900 0 0 4006500 3299600 5696800 4894500 3396800 3561000 18584 1349 16924 155601;155602;155603;155604;155605;155606;155607;155608;155609;155610;155611;155612;155613 123920;123921;123922;123923;123924;123925;123926;123927;123928;123929;123930;123931 123929 12 GGAAPEGPNEAEVTSGKPEQEVPDAEEEK Unmodified 2950.3316 0.33158365 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50.694 49.629 3 3.3009E-167 64485 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 180.71 174.06 685300000 114840000 186980000 3527100 16071000 15856000 16422000 21797000 17195000 14024000 25515000 31799000 52848000 23785000 54257000 90392000 18585 1564 16925 155614;155615;155616;155617;155618;155619;155620;155621;155622;155623;155624;155625;155626;155627;155628 123932;123933;123934;123935;123936;123937;123938;123939;123940;123941;123942;123943;123944;123945;123946;123947;123948;123949 123940 18 GGAARPNGPAAGNK Unmodified 1236.6323 0.63233138 1646 P51148 RAB5C Ras-related protein Rab-5C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 6.372 6.4968 2;3 4.5691E-19 4283 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 128.36 110.3 559630000 0 0 0 23683000 33963000 27428000 38391000 41750000 33710000 48678000 86943000 58228000 28267000 45304000 93286000 18586 1646 16926 155629;155630;155631;155632;155633;155634;155635;155636;155637;155638;155639;155640;155641;155642;155643;155644;155645;155646;155647;155648;155649;155650;155651;155652 123950;123951;123952;123953;123954;123955;123956;123957;123958;123959;123960;123961;123962;123963;123964;123965 123953 12 GGAASPAATASDPAGPPPLPLPGPPPLAPTATAGTLAASEGR Unmodified 3726.9217 0.92170327 2858 Q68DK7 MSL1 Male-specific lethal 1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 2 2 1 2 92.68 92.786 3;4 0.00014206 107902 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 21.665 16.759 23453000 0 0 0 0 1584100 0 0 0 0 5653800 4792900 2941300 0 0 8480600 18587 2858 16927 155653;155654;155655;155656;155657;155658;155659;155660 123966;123967;123968;123969;123970;123971 123970 6 GGAAVDPDSGLEHSAHVLEK Unmodified 1987.9599 0.95993268 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.03 3.36 6 3 26 3 3 3 2 2 2 2 2 1 2 2 3 3 3 2 54.393 53.122 3;4 2.7625E-47 59019 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 93.371 89.393 3069500000 354870000 426920000 1160200000 45559000 30098000 84284000 51978000 62072000 39872000 110660000 124420000 137720000 108140000 127030000 205680000 18588 894 16928 155661;155662;155663;155664;155665;155666;155667;155668;155669;155670;155671;155672;155673;155674;155675;155676;155677;155678;155679;155680;155681;155682;155683;155684;155685;155686;155687;155688;155689;155690;155691;155692;155693;155694;155695 123972;123973;123974;123975;123976;123977;123978;123979;123980;123981;123982;123983;123984;123985;123986;123987;123988;123989;123990;123991;123992;123993;123994;123995;123996;123997;123998;123999;124000;124001;124002;124003;124004;124005 123996 28 GGADVSGGVSAPDISLGEGHLSVK Unmodified 2208.1022 0.10223983 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 76.212 75.899 3 3.9762E-08 87768 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 36.256 28.674 219950000 0 113370000 0 0 0 0 3148700 10691000 7669300 14621000 10083000 17682000 4151400 8747200 29788000 18589 2172 16929 155696;155697;155698;155699;155700;155701;155702;155703;155704;155705 124006;124007;124008;124009;124010;124011 124008 6 GGAEEPGAEELLGPPAPGDK Unmodified 1889.9007 0.90068647 1616 P50219 MNX1 Motor neuron and pancreas homeobox protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.58 67.662 2 6.3762E-47 78029 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 114.31 108.59 190150000 0 0 0 11224000 10650000 12034000 14646000 12891000 11394000 15037000 23765000 22959000 21380000 13173000 20997000 18590 1616 16930 155706;155707;155708;155709;155710;155711;155712;155713;155714;155715;155716;155717 124012;124013;124014;124015;124016;124017;124018;124019;124020;124021;124022;124023 124023 12 GGAEGELQALR Unmodified 1099.5622 0.56218613 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 47.16 47.49 2 0.0032443 53091 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 78.264 64.057 8045500 0 0 0 0 0 0 0 0 0 0 0 0 8045500 0 0 18591 2501 16931 155718;155719;155720;155721;155722;155723 124024;124025;124026;124027;124028;124029 124028 6 GGAEQFMEETER Oxidation (M) 1398.5722 0.57215846 4065 Q99832 CCT7 T-complex protein 1 subunit eta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 1 2 2 2 2 2 2 2 2 2 2 2 30.112 30.326 2 1.9641E-08 31514 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 131.52 123.87 1147300000 0 0 0 27634000 62452000 79635000 83181000 74821000 44933000 109540000 113300000 157100000 144210000 99235000 151210000 18592 4065 16932 155724;155725;155726;155727;155728;155729;155730;155731;155732;155733;155734;155735;155736;155737;155738;155739;155740;155741;155742;155743;155744;155745;155746 124030;124031;124032;124033;124034;124035;124036;124037;124038;124039;124040;124041;124042;124043;124044;124045;124046;124047 124036 5564 18 GGAEQFMEETER Unmodified 1382.5772 0.57724384 4065 Q99832 CCT7 T-complex protein 1 subunit eta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.548 49.705 2 2.004E-05 56053 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 128.03 116.44 1194600000 0 0 0 82682000 64978000 112720000 72004000 67749000 58679000 92338000 111400000 127570000 77396000 92511000 234610000 18593 4065 16932 155747;155748;155749;155750;155751;155752;155753;155754;155755;155756;155757;155758 124048;124049;124050;124051;124052;124053;124054;124055;124056 124053 5 GGAGGTDGQGGTFR Unmodified 1236.5483 0.54832698 4868 Q9UDY4 DNAJB4 DnaJ homolog subfamily B member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 15.061 15.419 2 0.0006052 15064 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 65.695 51.692 90672000 0 0 0 0 0 0 0 0 0 0 0 20587000 14810000 18998000 36277000 18594 4868 16933 155759;155760;155761;155762 124057;124058;124059;124060 124059 3 GGAGHTDGPHSQTAEADASGLPHK Unmodified 2297.0421 0.042099184 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 4 14 1 1 2 1 1 2 1 1 1 1 2 2 2 23.516 22.874 3;4;5 0.005216 29401 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 34.658 31.605 194330000 35418000 12554000 46866000 3201500 0 0 2315800 6657400 2859200 6422300 8896800 14106000 14544000 16803000 23689000 18595 645 16934 155763;155764;155765;155766;155767;155768;155769;155770;155771;155772;155773;155774;155775;155776;155777;155778;155779;155780 124061;124062;124063;124064;124065 124064 5 GGAGVGSMTK Unmodified 863.4171 0.41710179 1401 P39019 RPS19 40S ribosomal protein S19 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 13.001 13.196 2 0.0029937 12458 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 78.113 36.683 166220000 0 0 0 8963700 7876300 0 0 8896600 0 17433000 24948000 26903000 23308000 11994000 35893000 18596 1401 16935 155781;155782;155783;155784;155785;155786;155787;155788;155789 124066;124067;124068;124069;124070 124066 3 GGAHDYYNVLPNK Unmodified 1446.6892 0.68917755 3286 Q8IYS1 PM20D2 Peptidase M20 domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 55.142 49.173 3 0.00042337 61369 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 72.089 57.528 113610000 50315000 47721000 15578000 0 0 0 0 0 0 0 0 0 0 0 0 18597 3286 16936 155790;155791;155792 124071;124072;124073;124074;124075 124075 4 GGAIDRYWPTADGR Unmodified 1533.7324 0.73243935 1701 P52788 SMS Spermine synthase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 59.892 60.305 3 0.0048617 67772 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.152 21.799 49334000 0 0 0 0 0 0 0 0 0 0 6798300 7641100 0 6391700 28502000 18598 1701 16937 155793;155794;155795;155796 124076;124077;124078 124076 3 GGAPLPGPGLQGEEEQGEGDQQEPQLLGTINAK Unmodified 3313.6062 0.60624237 5191 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 82.61 82.749 3 5.2084E-05 95850 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 26.493 24.488 20443000 0 0 0 0 0 3024800 0 2594900 1863500 4765500 3591000 4603500 0 0 0 18599 5191 16938 155797;155798;155799;155800;155801;155802 124079;124080;124081 124079 1 GGAPRGPHGGAASAQDGR Unmodified 1617.772 0.77201275 527 O75638 CTAG2 Cancer/testis antigen 2 yes yes 0 0 1 By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 2 2 1 1 1 2 1 2 2 6.5932 6.6916 3;4 0.0012166 4933 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 32.981 21.876 32870000 0 0 0 1755000 1958800 2909100 2389500 1864600 0 0 3209400 6771100 3275500 4907900 3829000 18600 527 16939 155803;155804;155805;155806;155807;155808;155809;155810;155811;155812;155813;155814;155815;155816;155817 124082;124083;124084;124085;124086 124086 4 GGARVEPADASGTEK Unmodified 1443.6954 0.69538514 1561 P49189 ALDH9A1 4-trimethylaminobutyraldehyde dehydrogenase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 12.273 12.451 3 7.4278E-10 10764 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 75.574 41.189 100520000 0 0 0 9652300 0 3867000 2028000 4318500 2098700 5432700 10153000 15863000 4951100 10399000 31756000 18601 1561 16940 155818;155819;155820;155821;155822;155823;155824;155825;155826;155827;155828 124087;124088;124089;124090;124091;124092;124093;124094;124095;124096;124097;124098 124093 11 GGASGPGSGSGGPGGPAGR Unmodified 1438.6549 0.65491731 4981 Q9UKZ1 CNOT11 CCR4-NOT transcription complex subunit 11 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.565 13.745 2 3.5942E-05 13314 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 63.76 53.528 23430000 0 0 0 1594600 997620 0 1583600 2188800 1103900 2430200 1867700 2950800 2983700 2278800 3450500 18602 4981 16941 155829;155830;155831;155832;155833;155834;155835;155836;155837;155838;155839;155840 124099;124100;124101;124102;124103;124104;124105 124104 7 GGASIIQCHILNDK Unmodified 1524.7719 0.77186132 3470 Q8TAF3 WDR48 WD repeat-containing protein 48 yes yes 0 0 0 By MS/MS 2 0 1 1 69.606 61.321 3 0.00092076 81954 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.472 51.214 15825000 15825000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18603 3470 16942 155841 124106 124106 1 GGATPLSYPSPGPQPPGPSWTATFDPVPTDAPTSPR Unmodified 3602.7318 0.73177723 5051 Q9UPN7 PPP6R1 Serine/threonine-protein phosphatase 6 regulatory subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 91.059 91.212 3 1.4054E-09 105686 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 31.936 26.931 10693000 0 0 0 0 0 0 0 0 0 4319900 2052500 0 0 0 4320300 18604 5051 16943 155842;155843;155844 124107;124108 124108 2 GGAVVDEGPTGVK Unmodified 1184.6037 0.60371659 285 O15427 SLC16A3 Monocarboxylate transporter 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 31.689 31.484 2 0.0024987 34454 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 58.37 46.415 92243000 0 9912800 0 4768300 0 7537400 5289500 0 5188600 8326000 9557500 14036000 7912200 9099800 10615000 18605 285 16944 155845;155846;155847;155848;155849;155850;155851;155852;155853;155854;155855 124109;124110;124111;124112;124113;124114;124115;124116;124117;124118 124110 10 GGCPGGEATLSQPPPR Unmodified 1579.7413 0.74128948 1102 P20290 BTF3 Transcription factor BTF3 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 35.958 36.558 2 0.0052613 39951 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 42.095 26.524 27639000 0 0 0 0 0 0 0 0 0 0 10573000 0 0 0 17066000 18606 1102 16945 155856;155857 124119 124119 1 GGDCDGFSTFDVPIFTEEFLDQNK Unmodified 2737.1854 0.18537711 4800 Q9P0W2 HMG20B SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related yes yes 0 0 0 By MS/MS 2 0 1 1 99.212 96.786 3 0.002006 116994 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 33.665 26.472 2843900 0 0 2843900 0 0 0 0 0 0 0 0 0 0 0 0 18607 4800 16946 155858 124120;124121 124120 2 GGDEEENDEPPK Unmodified 1314.5212 0.52116875 4978 Q9UKX7 NUP50 Nuclear pore complex protein Nup50 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.83 1 8 1 1 1 1 1 1 1 1 1 20.909 21.637 2 3.053E-18 92425 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 185.29 180.35 39825000 23022000 0 0 0 777080 2227800 1751300 0 0 0 2058500 2339500 2066600 2147400 3434600 18608 4978 16947 155859;155860;155861;155862;155863;155864;155865;155866;155867 124122;124123;124124;124125;124126;124127;124128 124124 5 GGDEYDNHCGK Unmodified 1250.4622 0.46221408 1108 P20645 M6PR Cation-dependent mannose-6-phosphate receptor yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 6.5784 3.279 2 2.7221E-16 5256 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 161.79 155.69 18123000 0 18123000 0 0 0 0 0 0 0 0 0 0 0 0 0 18609 1108 16948 155868;155869 124129 124129 1 GGDGAVRSETAPDSYK Unmodified 1608.738 0.73797824 2398 Q14244 MAP7 Ensconsin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 22.193 22.305 3 0.0047005 23169 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 27.032 14.866 20367000 0 0 0 4937400 0 0 0 7084400 0 0 0 0 0 8345000 0 18610 2398 16949 155870;155871;155872 124130;124131;124132;124133 124130 4 GGDGGESERFNPGELR Unmodified 1675.755 0.75502529 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.678 45.848 3 3.7304E-05 52061 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 79.393 70.859 1073600000 0 0 0 46564000 55504000 76882000 63660000 84283000 49707000 86478000 99625000 168930000 107200000 104010000 130770000 18611 213 16950 155873;155874;155875;155876;155877;155878;155879;155880;155881;155882;155883;155884 124134;124135;124136;124137;124138;124139;124140 124140 5 GGDGIKPPPIIGR Unmodified 1275.7299 0.72992016 4636 Q9NTK5 OLA1 Obg-like ATPase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 57.247 57.425 3 0.00047167 65008 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 72.496 60.63 121630000 0 0 0 4235500 0 22801000 5815700 4986000 6242700 11445000 11155000 15822000 7782300 11687000 19654000 18612 4636 16951 155885;155886;155887;155888;155889;155890;155891;155892;155893;155894;155895 124141;124142;124143;124144 124141 2 GGDIEAQSER Unmodified 1060.4785 0.47851608 3250 Q8IWZ3 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 10.709 10.916 2 0.003743 8876 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.378 53.141 28612000 0 0 0 0 0 0 5170800 3438000 0 0 0 6909200 5933700 0 7160600 18613 3250 16952 155896;155897;155898;155899;155900 124145;124146;124147 124146 3 GGDLMAYDR Oxidation (M) 1012.4284 0.42839476 1868 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 25.27 25.414 2 0.0098103 26250 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.859 31.919 128280000 0 0 0 10470000 9322600 16386000 13169000 8115600 8306800 18661000 13435000 17295000 13116000 0 0 18614 1868 16953 155901;155902;155903;155904;155905;155906;155907;155908;155909;155910 124148;124149;124150;124151;124152 124152 3020 5 GGDLMAYDR Unmodified 996.43348 0.43348014 1868 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.179 39.359 2 0.023307 42411 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 51.113 29.585 172290000 0 0 0 6589900 4273300 11620000 7625200 12648000 6100700 24860000 17978000 21333000 12479000 13073000 33709000 18615 1868 16953 155911;155912;155913;155914;155915;155916;155917;155918;155919;155920;155921;155922 124153 124153 1 GGDLMAYDRR Unmodified 1152.5346 0.53459117 1868 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 32.775 32.959 2;3 0.00085086 36061 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 70.1 55.434 1557100000 0 0 0 46542000 35061000 137620000 71525000 78734000 42831000 195410000 187390000 179660000 112220000 125520000 344590000 18616 1868 16954 155923;155924;155925;155926;155927;155928;155929;155930;155931;155932;155933;155934;155935;155936;155937;155938;155939;155940;155941;155942;155943;155944;155945;155946 124154;124155;124156;124157;124158;124159;124160;124161;124162;124163;124164;124165;124166;124167;124168;124169 124155 13 GGDLMAYDRR Oxidation (M) 1168.5295 0.52950579 1868 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 21.225 21.537 3 0.019854 21296 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.348 35.262 720890000 0 0 0 0 43905000 0 0 44048000 0 117900000 116580000 120110000 73558000 88524000 116250000 18617 1868 16954 155947;155948;155949;155950;155951;155952;155953;155954 124170;124171;124172;124173;124174;124175;124176;124177 124171 3020 0 GGDPALIRETQEK Unmodified 1412.726 0.72595699 1580 P49591 SARS Serine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.83 3.76 3 2 7 1 3 1 1 1 1 1 1 1 1 33.79 32.016 2;3 5.3417E-07 40327 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 134.13 103.57 940560000 75342000 610510000 93510000 0 0 0 11668000 0 11448000 0 26625000 33972000 14521000 17060000 45908000 18618 1580 16955 155955;155956;155957;155958;155959;155960;155961;155962;155963;155964;155965;155966 124178;124179;124180;124181;124182;124183;124184 124181 3 GGDPFWDGPGDPMR Unmodified 1502.6249 0.62486274 3955 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS 10 0 5 1 1 1 1 1 77.443 77.569 2 0.02956 89113 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.452 40.48 24374000 0 0 0 0 0 3140000 0 3109400 0 5726100 0 0 3092400 0 9305700 18619 3955 16956 155967;155968;155969;155970;155971 124185 124185 0 GGDPFWDGPGDPMR Oxidation (M) 1518.6198 0.61977736 3955 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes yes 0 1 0 By MS/MS 10 0 1 1 67.081 67.243 2 0.017745 76845 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 47.559 44.581 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18620 3955 16956 155972 124186 124186 5442 1 GGDSIGETPTPGASK Unmodified 1372.647 0.64703797 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.763 28.958 2 9.0882E-19 30682 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 107.09 85.628 693840000 0 0 0 32174000 33180000 49796000 41595000 41346000 28731000 64205000 78041000 78696000 85473000 74283000 86322000 18621 516 16957 155973;155974;155975;155976;155977;155978;155979;155980;155981;155982;155983;155984 124187;124188;124189;124190;124191;124192;124193;124194;124195;124196;124197;124198;124199;124200 124192 14 GGDVFGDTSFLSNHGGSSGSTHR Unmodified 2277.9999 0.99990002 2039 Q00587 CDC42EP1 Cdc42 effector protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 62.72 62.955 3;4 0.00012436 71119 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.827 36.133 44988000 0 0 0 0 0 0 0 0 5964900 6201600 0 20459000 12362000 0 0 18622 2039 16958 155985;155986;155987;155988;155989 124201;124202;124203 124202 3 GGEADNLDEFLK Unmodified 1306.6041 0.60411052 382 O60216 RAD21 Double-strand-break repair protein rad21 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 75.65 75.742 2 2.5361E-05 87385 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 114.4 89.547 178470000 0 0 0 11742000 0 0 14439000 0 0 23425000 24489000 27648000 18299000 19616000 38813000 18623 382 16959 155990;155991;155992;155993;155994;155995;155996;155997 124204;124205;124206;124207;124208;124209;124210 124209 6 GGEATRMEEGEVYAIETFGSTGK Unmodified 2418.1009 0.1009192 1631 P50579 METAP2 Methionine aminopeptidase 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 84.819 79.696 3 4.7852E-14 100616 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.777 82.183 149160000 40590000 87698000 20876000 0 0 0 0 0 0 0 0 0 0 0 0 18624 1631 16960 155998;155999;156000 124211;124212;124213 124211 3 GGEATRMEEGEVYAIETFGSTGK Oxidation (M) 2434.0958 0.095833818 1631 P50579 METAP2 Methionine aminopeptidase 2 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 6.67 3.74 2 2 5 2 1 1 1 1 1 1 1 75.909 73.997 3 1.4832E-07 94262 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.676 69.533 62300000 13653000 4634500 15535000 0 0 3632700 2765400 0 0 0 0 6387200 0 3049100 12643000 18625 1631 16960 156001;156002;156003;156004;156005;156006;156007;156008;156009 124214;124215;124216;124217;124218;124219 124217 2622 6 GGEDGPAIAIDLSGINETNDLK Unmodified 2198.0703 0.070270995 2421 Q14651 PLS1 Plastin-1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 89.334 85.281 2 1.5427E-167 105869 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 224.67 203.37 114890000 0 114890000 0 0 0 0 0 0 0 0 0 0 0 0 0 18626 2421 16961 156010;156011 124220;124221 124220 2 GGEDLRQDQR Unmodified 1172.5534 0.55341235 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 7.4759 7.5923 2;3 0.0010779 5038 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 104.79 77.657 458950000 0 0 0 31738000 25000000 38954000 26532000 32441000 32421000 41171000 27230000 68672000 15512000 53635000 65645000 18627 1986 16962 156012;156013;156014;156015;156016;156017;156018;156019;156020;156021;156022;156023;156024;156025;156026;156027;156028;156029;156030;156031;156032;156033;156034;156035 124222;124223;124224;124225;124226;124227;124228;124229;124230;124231;124232;124233 124226 8 GGEDTNDLQQK Unmodified 1203.5368 0.53675924 690 O95785 WIZ Protein Wiz yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 11.138 11.246 2 0.0062945 9659 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 56.916 19.188 75186000 0 0 0 7038100 4905900 2258800 9173700 5901900 0 6445100 0 10294000 8351600 8164700 12652000 18628 690 16963 156036;156037;156038;156039;156040;156041;156042;156043;156044;156045 124234 124234 1 GGEELLPPESTPIPANLSQNLEAAAATQVAVSVPK Unmodified 3497.8253 0.82534327 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 97.821 93.393 3 7.08E-71 112941 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 110.59 108.65 715660000 43346000 656180000 16135000 0 0 0 0 0 0 0 0 0 0 0 0 18629 2102 16964 156046;156047;156048;156049;156050 124235;124236;124237;124238;124239;124240 124238 6 GGEHGPQVPLSQPPEDELDRLTK Unmodified 2498.2401 0.24013029 2563 Q15654 TRIP6 Thyroid receptor-interacting protein 6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 73.908 74.111 4 0.00018911 84827 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.693 32.246 63034000 0 0 0 0 0 0 0 0 0 13347000 16631000 0 0 7014900 26041000 18630 2563 16965 156051;156052;156053;156054 124241 124241 1 GGEIQPVSVK Unmodified 1012.5553 0.55530983 1853 P61604 HSPE1 10 kDa heat shock protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.42 3.66 3 1 8 1 2 1 1 1 1 1 1 1 1 1 36.143 34.635 2 0.0080823 42397 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 94.692 70.537 1330300000 76170000 1013700000 4576700 12299000 2729900 0 3594100 4676900 0 0 47425000 44337000 0 35189000 85584000 18631 1853 16966 156055;156056;156057;156058;156059;156060;156061;156062;156063;156064;156065;156066 124242;124243;124244;124245;124246;124247;124248;124249;124250;124251 124245 6 GGELASAVHAYTK Unmodified 1302.6568 0.65681479 3787 Q96CW5 TUBGCP3 Gamma-tubulin complex component 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 2 1 1 1 1 1 1 1 47.743 45.93 2;3 0.0010051 51132 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 53.136 35.542 126720000 87697000 0 0 2850400 3518200 0 4080600 8900000 4151800 6089100 9437200 0 0 0 0 18632 3787 16967 156067;156068;156069;156070;156071;156072;156073;156074;156075 124252;124253;124254;124255;124256 124252 3 GGELTLLGTQDDISAAK Unmodified 1687.8628 0.8628444 3500 Q8TDB6 DTX3L E3 ubiquitin-protein ligase DTX3L yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.613 76.671 2 1.0979E-09 88606 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 108.59 75.864 88289000 0 0 0 3447300 4718900 6112600 5378400 4273400 4537800 9132800 8549000 10884000 7266200 8116600 15872000 18633 3500 16968 156076;156077;156078;156079;156080;156081;156082;156083;156084;156085;156086;156087 124257;124258;124259;124260;124261;124262;124263;124264;124265;124266;124267;124268;124269;124270 124268 13 GGELVYTDSEAR Unmodified 1295.5994 0.59935949 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 37.743 37.842 2 0.012301 42505 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 53.683 16.207 23919000 0 0 0 2857700 1955400 2740300 2882700 0 0 4112300 3160000 4110900 0 2100000 0 18634 2501 16969 156088;156089;156090;156091;156092;156093;156094;156095 124271;124272;124273;124274;124275;124276 124275 6 GGELVYTDSEARDVFEK Unmodified 1913.9007 0.90068647 2501 Q15149 PLEC Plectin yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.36 2.01 1 10 1 1 1 1 1 1 1 1 1 1 1 67.791 67.516 3 0.0018699 77748 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 34.094 30.705 97104000 0 4402100 0 0 5652100 11887000 0 9194900 5950700 8924200 9325800 15816000 5499600 7089100 13363000 18635 2501 16970 156096;156097;156098;156099;156100;156101;156102;156103;156104;156105;156106 124277;124278;124279;124280;124281;124282;124283;124284;124285;124286;124287 124287 11 GGENNEISETR Unmodified 1204.532 0.53200821 1390 P37287 PIGA Phosphatidylinositol N-acetylglucosaminyltransferase subunit A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 7.8465 8.0121 2 0.0013049 5877 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 73.665 11.006 20445000 0 0 0 2328100 0 0 0 0 0 4861000 0 6829300 0 3048600 3378100 18636 1390 16971 156107;156108;156109;156110;156111 124288;124289;124290;124291;124292 124288 3 GGEPDLQTVGK Unmodified 1099.551 0.55095274 2345 Q13823 GNL2 Nucleolar GTP-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 34.457 34.796 2 0.0072864 38208 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 54.416 32.33 24091000 0 0 0 0 0 0 0 0 2740000 8659000 0 5918000 6773500 0 0 18637 2345 16972 156112;156113;156114;156115 124293;124294 124294 2 GGEPQGPPFIK Unmodified 1125.5819 0.58185893 1802 P58107 EPPK1 Epiplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 54.323 54.383 2 0.021462 61492 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 42.287 26.085 16978000 0 0 0 7323200 0 0 2997200 4073200 0 0 0 2584400 0 0 0 18638 1802 16973 156116;156117;156118;156119 124295 124295 1 GGETPEGLATSVVHYGAGAK Unmodified 1899.9327 0.9326553 4999 Q9ULL5 PRR12 Proline-rich protein 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 74.089 74.198 3 1.9133E-05 85098 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.49 47.831 78350000 0 0 0 0 4940900 10457000 4460500 0 4935300 10116000 8335900 10643000 5142600 5453800 13866000 18639 4999 16974 156120;156121;156122;156123;156124;156125;156126;156127;156128;156129 124296;124297;124298;124299;124300;124301;124302;124303 124298 7 GGETPGSEQWK Unmodified 1174.5255 0.52546627 391 O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 26.311 26.162 2 0.0097999 32619 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.67 81.533 102380000 0 62179000 0 3483000 3105800 3087600 2767500 1931000 2958100 3811100 3647600 3197300 2818900 3237100 6153700 18640 391 16975 156130;156131;156132;156133;156134;156135;156136;156137;156138;156139;156140;156141;156142 124304;124305 124305 1 GGETVMVNAAAGAVGSVVGQIAK Unmodified 2085.0888 0.088838367 2454 Q14914 PTGR1 Prostaglandin reductase 1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 96.367 92.853 2;3 6.1974E-46 111184 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 124.62 112.35 56308000 0 50833000 5474900 0 0 0 0 0 0 0 0 0 0 0 0 18641 2454 16976 156143;156144;156145 124306;124307;124308 124307 3 GGFAPAEK Unmodified 775.38645 0.38645359 1532 P48059 LIMS1 LIM and senescent cell antigen-like-containing domain protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 18.259 18.158 1;2 0.023017 17192 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.682 31.344 150160000 0 22928000 0 8686000 7051400 11688000 10375000 6748500 5361500 10474000 12786000 13188000 9707000 10631000 20532000 18642 1532 16977 156146;156147;156148;156149;156150;156151;156152;156153;156154;156155;156156;156157;156158 124309;124310;124311;124312;124313 124310 4 GGFDGEYQDDSLDLLR Unmodified 1798.801 0.80097243 2723 Q5F1R6 DNAJC21 DnaJ homolog subfamily C member 21 yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 82.283 82.389 2 6.8166E-11 95059 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 117.23 104.47 28818000 0 0 0 0 1368800 3291300 1312900 2525700 1347500 3429000 3751900 4108700 0 0 7682100 18643 2723 16978 156159;156160;156161;156162;156163;156164;156165;156166;156167 124314;124315;124316;124317;124318;124319 124316 6 GGFDGEYQDDSLDLLRYFTVTCYSGYGDDEK Unmodified 3584.5202 0.52018906 2723 Q5F1R6 DNAJC21 DnaJ homolog subfamily C member 21 yes yes 0 0 1 By MS/MS 2 0 1 1 99.186 91.055 3 5.3206E-78 117440 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 122.09 116.82 23270000 23270000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18644 2723 16979 156168 124320 124320 1 GGFLPPEEIK Unmodified 1085.5757 0.57571092 4323 Q9H0D6 XRN2 5'-3' exoribonuclease 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 67.522 67.131 2 0.020507 86169 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.42 53.547 171110000 0 89530000 0 4766000 4297900 8223400 6763600 5977000 0 7110000 8684100 7808000 7594500 7936000 12414000 18645 4323 16980 156169;156170;156171;156172;156173;156174;156175;156176;156177;156178;156179;156180 124321;124322;124323;124324 124322 4 GGFNRPLDFIA Unmodified 1205.6193 0.61930707 3562 Q8WVK2 SNRNP27 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein yes yes 0 0 1 By MS/MS 2 0 1 1 88.581 80.45 2 0.040453 104632 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.301 63.844 65884000 65884000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18646 3562 16981 156181 124325 124325 0 GGFSSNSASGGSGSQAR Unmodified 1512.6553 0.65531124 96 CON__Q5XKE5;Q5XKE5 KRT79 Keratin, type II cytoskeletal 79 yes no 0 0 0 By MS/MS 10 0 1 1 12.703 12.567 2 0.00057637 11655 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 72.089 63.226 + 5711600 0 0 0 5711600 0 0 0 0 0 0 0 0 0 0 0 18647 96 16982 156182 124326 124326 1 GGFVLLDGETFEVK Unmodified 1509.7715 0.7715102 2256 Q13228 SELENBP1 Selenium-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 2 3 1 92.417 87.892 2 0.0017979 111053 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.706 66.886 166690000 76581000 84348000 5756600 0 0 0 0 0 0 0 0 0 0 0 0 18648 2256 16983 156183;156184;156185;156186;156187;156188 124327;124328;124329;124330;124331 124330 4 GGGAASSVGGPNGGK Unmodified 1171.5582 0.55816338 1736 P54259 ATN1 Atrophin-1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 8.3512 8.4623 2 0.00027483 6489 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 67.726 56.86 28030000 0 0 0 3754500 1429700 0 1538000 1128700 2663300 2018100 0 2407900 6741900 0 6347700 18649 1736 16984 156189;156190;156191;156192;156193;156194;156195;156196;156197 124332;124333;124334;124335 124332 3 GGGAEEATEAGR Unmodified 1103.4843 0.48432973 4652 Q9NUQ3 TXLNG Gamma-taxilin yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 7.8227 8.1733 2 0.040747 5949 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 34.721 23.652 2980900 0 0 0 0 0 0 0 0 0 0 1526200 0 0 0 1454600 18650 4652 16985 156198;156199 124336 124336 1 GGGAFVQNSQPVAVR Unmodified 1485.7688 0.76882486 1328 P33176 KIF5B Kinesin-1 heavy chain yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.817 48.975 2 1.4075E-30 54150 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 169.37 147.93 610200000 0 0 0 34751000 29322000 53932000 34497000 30255000 26965000 59792000 69863000 102520000 28673000 37868000 101760000 18651 1328 16986 156200;156201;156202;156203;156204;156205;156206;156207;156208;156209;156210;156211 124337;124338;124339;124340;124341;124342;124343;124344;124345;124346;124347 124340 11 GGGAGGNSDSDNLDSTDCNSESSSGGK Unmodified 2530.9586 0.95862465 3250 Q8IWZ3 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 17.586 17.682 3 0.00021767 17506 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 17.435 17.024 20325000 0 0 0 0 3439300 2435800 3164900 2194200 1396000 2312800 0 0 3312900 2069500 0 18652 3250 16987 156212;156213;156214;156215;156216;156217;156218;156219 124348;124349;124350;124351 124350 3 GGGAGGSSVGTGGGGTGGVGGGAGSEDSGDR Unmodified 2393.0076 0.0075641716 2130 Q06587 RING1 E3 ubiquitin-protein ligase RING1 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 18 2 1 2 1 2 2 2 2 2 2 23.976 24.202 2;3 2.3065E-33 25385 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 71.528 68.065 104970000 0 0 0 7541900 0 8378900 8062000 1822100 7207600 11616000 17649000 0 13352000 11742000 17596000 18653 2130 16988 156220;156221;156222;156223;156224;156225;156226;156227;156228;156229;156230;156231;156232;156233;156234;156235;156236;156237 124352;124353;124354;124355;124356;124357;124358;124359 124357 8 GGGAGQPLPLVSPPFSVPVQNGAQPPSK Unmodified 2682.4129 0.4129497 3968 Q96RK0 CIC Protein capicua homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 89.055 89.154 3 0.004582 103333 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 22.723 19.736 26634000 0 0 0 0 2439600 2448500 1848100 3085100 2369200 3784100 0 4361500 0 0 6298500 18654 3968 16989 156238;156239;156240;156241;156242;156243;156244;156245 124360;124361;124362;124363;124364;124365 124364 6 GGGALSAVAATK Unmodified 1001.5506 0.55055881 1826 P61011 SRP54 Signal recognition particle 54 kDa protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 36.332 35.443 2 2.8258E-05 46304 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.98 68.417 2127900000 151880000 553110000 0 68734000 81232000 80165000 103580000 132590000 92223000 133340000 143760000 164360000 149050000 108720000 165120000 18655 1826 16990 156246;156247;156248;156249;156250;156251;156252;156253;156254;156255;156256;156257;156258;156259;156260;156261;156262 124366;124367;124368;124369;124370;124371;124372;124373;124374;124375;124376;124377;124378;124379;124380 124368 8 GGGATGPGGAEPGEDTALLR Unmodified 1781.8544 0.85440498 5015 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B yes yes 0 0 0 By matching By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 57.069 56.843 2 0.0035388 63822 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 40.552 25.862 12005000 0 0 0 1864600 3216300 0 3352400 0 0 0 0 0 0 3572100 0 18656 5015 16991 156263;156264;156265;156266 124381;124382 124381 2 GGGDGGGGGRSFSQPEAGGSHHK Unmodified 2094.9216 0.92159012 3567 Q8WVV9 HNRNPLL Heterogeneous nuclear ribonucleoprotein L-like yes yes 0 0 1 By MS/MS 2 0 1 1 14.878 10.829 3 0.00042107 16145 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 44.5 40.472 6537000 6537000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18657 3567 16992 156267 124383 124383 1 GGGDLPNSQEALQK Unmodified 1412.6896 0.68957148 702 O95865 DDAH2 N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 yes yes 0 0 0 By MS/MS 10 0 1 1 37.25 36.781 2 0.031002 41100 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 31.597 16.015 4992600 0 0 0 4992600 0 0 0 0 0 0 0 0 0 0 0 18658 702 16993 156268 124384 124384 1 GGGDVLEPVSSDSLSTK Unmodified 1646.7999 0.79990979 2734 Q5JSH3 WDR44 WD repeat-containing protein 44 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.12 3.26 2 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 62.051 60.623 2 1.0409E-13 69776 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 122.46 116.61 357950000 19589000 119500000 0 8650900 8821800 7313200 11902000 10449000 6506100 14831000 31448000 34540000 12824000 22417000 49153000 18659 2734 16994 156269;156270;156271;156272;156273;156274;156275;156276;156277;156278;156279;156280;156281;156282;156283;156284 124385;124386;124387;124388;124389;124390;124391;124392;124393;124394;124395;124396;124397;124398;124399 124386 15 GGGEAESGGGGSGSAPVTAGAAGPAAQEAEPPLTAVLVEEEEEEGGR Unmodified 4290.9636 0.96364026 5052 Q9UPN9 TRIM33 E3 ubiquitin-protein ligase TRIM33 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 88.745 88.871 4 0.0028066 103041 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 13.724 12.369 8379400 0 0 0 0 0 0 0 0 0 5628300 0 0 0 0 2751100 18660 5052 16995 156285;156286 124400;124401 124400 2 GGGEVIVRMSPVK Unmodified 1327.7282 0.7282056 155 O00442 RTCA RNA 3'-terminal phosphate cyclase yes yes 0 0 1 By MS/MS 2 0 1 1 64.676 56.396 3 0.017512 75782 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 33.842 19.878 42186000 42186000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18661 155 16996 156287 124402 124402 1 GGGFFSGLGGK Unmodified 982.48723 0.48723027 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 66.326 66.581 2 0.030895 76316 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 53.965 31.513 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18662 1364 16997 156288;156289;156290;156291 124403;124404;124405;124406 124405 4 GGGFFSGLGGKPSQDAANK Unmodified 1793.8697 0.86966111 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 2 1 1 1 1 1 1 2 57.455 57.65 2;3 2.439E-08 65761 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 81.043 77.495 467340000 0 0 0 30063000 0 24504000 37535000 72098000 30313000 40169000 0 90979000 42417000 25225000 74041000 18663 1364 16998 156292;156293;156294;156295;156296;156297;156298;156299;156300;156301;156302;156303;156304 124407;124408;124409;124410;124411;124412;124413;124414;124415;124416;124417;124418;124419 124415 13 GGGFGGGSSFGGGSGFSGGGFGGGGFGGGR Unmodified 2398.0111 0.011133407 79 CON__P35908v2;P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 21 2 2 2 2 2 2 2 2 2 1 2 79.954 80.009 2;3 4.2054E-07 92416 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 16.917 16.332 + 156540000 0 0 0 19360000 7052000 12254000 2685500 23424000 6001600 32258000 15386000 14469000 0 1680900 21966000 18664 79 16999 156305;156306;156307;156308;156309;156310;156311;156312;156313;156314;156315;156316;156317;156318;156319;156320;156321;156322;156323;156324;156325 124420;124421;124422;124423;124424 124421 4 GGGGDMAEPSEAGDAPPDDGPPGELGPDGPDGPEEK Oxidation (M) 3388.3797 0.37973241 868 P08621 SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 60.775 61.046 3 1.5822E-40 69473 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 62.105 59.761 101990000 0 0 0 0 0 10966000 0 8898900 0 10728000 12700000 21545000 7939900 11418000 17791000 18665 868 17000 156326;156327;156328;156329;156330;156331;156332;156333 124425;124426;124427;124428;124429;124430;124431;124432 124425 1112 8 GGGGDMAEPSEAGDAPPDDGPPGELGPDGPDGPEEK Unmodified 3372.3848 0.38481779 868 P08621 SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 65.731 65.799 3 2.827E-48 74813 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.198 65.032 71670000 0 0 0 4483700 5445000 6239200 0 0 4360600 6399800 8466100 10353000 4258400 6123100 15542000 18666 868 17000 156334;156335;156336;156337;156338;156339;156340;156341;156342;156343 124433;124434;124435;124436;124437;124438;124439;124440;124441;124442;124443 124435 11 GGGGEPGAHGGAESGASGRK Unmodified 1694.7721 0.77207233 4437 Q9H7S9 ZNF703 Zinc finger protein 703 yes yes 0 0 1 By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 5.585 5.6956 4 0.00050452 3408 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 28.891 22.162 48228000 0 0 0 3061800 3180700 3822200 4825000 3385300 3730200 3923300 4450500 5555000 0 3925600 8368300 18667 4437 17001 156344;156345;156346;156347;156348;156349;156350;156351;156352;156353;156354 124444;124445;124446 124446 2 GGGGGGFRGFSSGSAVVSGGSR Unmodified 1898.8983 0.89833548 79 CON__P35908v2;P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 50.786 50.801 3 3.4665E-77 57291 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 140.73 129.88 + 292620000 0 0 0 34400000 18756000 42082000 0 75340000 30079000 28987000 0 62973000 0 0 0 18668 79 17002 156355;156356;156357;156358;156359;156360;156361;156362;156363;156364;156365;156366 124447;124448;124449;124450;124451;124452;124453;124454;124455;124456;124457;124458;124459;124460;124461;124462 124451 16 GGGGGGPGEGFDVAK Unmodified 1260.5735 0.57347909 5092 Q9Y295 DRG1 Developmentally-regulated GTP-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 38.642 38.415 2 3.4899E-50 48156 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 196.11 182.74 486730000 0 346400000 0 9525400 7206600 12912000 10148000 5331800 7198700 11839000 15769000 14451000 13903000 13373000 18678000 18669 5092 17003 156367;156368;156369;156370;156371;156372;156373;156374;156375;156376;156377;156378;156379 124463;124464;124465;124466;124467;124468;124469;124470;124471;124472;124473;124474;124475 124467 11 GGGGGGQGAEGPPGTPR Unmodified 1407.6491 0.64910365 3519 Q8TER5 ARHGEF40 Rho guanine nucleotide exchange factor 40 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 18.671 18.826 2 0.010935 19464 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 45.915 37.186 17778000 0 0 0 1558800 1929500 2068200 1363900 785250 1209700 2160900 0 2838800 1860400 0 2002700 18670 3519 17004 156380;156381;156382;156383;156384;156385;156386;156387;156388;156389 124476;124477;124478;124479;124480;124481;124482 124476 7 GGGGGGSGGIGYPYPR Unmodified 1407.6531 0.6531264 2046 Q00839 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 47.349 47.423 2 2.9144E-10 53357 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 93.258 82.106 26924000 0 0 0 0 3856600 0 0 2795100 0 7632700 0 0 6502900 6136400 0 18671 2046 17005 156390;156391;156392;156393;156394;156395 124483;124484;124485 124484 3 GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unmodified 2382.9446 0.94456998 780 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 39 6 2 3 4 6 3 2 2 4 2 3 2 27.213 27.372 2;3 0 28504 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 336.75 232.32 + 17537000000 0 0 0 1547800000 991640000 1287200000 708750000 4155600000 655690000 1437900000 1470800000 1831900000 1620100000 1041800000 788090000 18672 780 17006 156396;156397;156398;156399;156400;156401;156402;156403;156404;156405;156406;156407;156408;156409;156410;156411;156412;156413;156414;156415;156416;156417;156418;156419;156420;156421;156422;156423;156424;156425;156426;156427;156428;156429;156430;156431;156432;156433;156434 124486;124487;124488;124489;124490;124491;124492;124493;124494;124495;124496;124497;124498;124499;124500;124501;124502;124503;124504;124505;124506;124507;124508;124509;124510;124511;124512;124513;124514;124515;124516;124517 124504 30 GGGGGQDNGLEGLGNDSR Unmodified 1658.7245 0.72445344 868 P08621 SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.948 38.129 2 0 41703 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 281.12 261.35 896960000 0 0 0 48764000 55474000 49098000 84575000 87444000 48048000 71025000 80381000 107400000 89279000 61433000 114030000 18673 868 17007 156435;156436;156437;156438;156439;156440;156441;156442;156443;156444;156445;156446 124518;124519;124520;124521;124522;124523;124524;124525;124526;124527;124528;124529 124527 12 GGGGNFGPGPGSNFR Unmodified 1376.6222 0.62216062 1141 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.358 45.528 2 2.822E-41 50014 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 160.18 149.35 2109900000 0 0 0 81641000 76606000 83584000 112480000 114220000 81005000 157580000 316740000 299090000 155080000 180200000 451660000 18674 1141 17008 156447;156448;156449;156450;156451;156452;156453;156454;156455;156456;156457;156458 124530;124531;124532;124533;124534;124535;124536;124537;124538;124539;124540;124541;124542 124538 13 GGGGNFGPGPGSNFRGGSDGYGSGR Unmodified 2269.9849 0.98491866 1141 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 46.096 46.264 3 3.7215E-33 51495 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 91.583 82.982 283450000 0 0 0 12124000 5731000 9166200 20037000 0 15728000 20693000 57727000 35363000 16371000 19974000 70532000 18675 1141 17009 156459;156460;156461;156462;156463;156464;156465;156466;156467;156468;156469 124543;124544;124545;124546;124547;124548;124549;124550;124551;124552;124553;124554;124555;124556 124553 14 GGGGPGGGGPGGGSAGGPSQPPGGGGPGIR Unmodified 2269.0584 0.058417951 3690 Q92945 KHSRP Far upstream element-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.096 40.275 3 6.7045E-61 44582 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 98.299 90.112 326110000 0 0 0 22589000 17080000 17224000 21318000 16297000 20398000 28582000 37773000 32816000 19312000 30695000 62024000 18676 3690 17010 156470;156471;156472;156473;156474;156475;156476;156477;156478;156479;156480;156481 124557;124558;124559;124560;124561;124562;124563;124564;124565;124566;124567;124568;124569;124570;124571 124563 15 GGGGPGGGGPGGGSAGGPSQPPGGGGPGIRK Unmodified 2397.1534 0.15338097 3690 Q92945 KHSRP Far upstream element-binding protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.863 32.049 3 3.72E-128 34828 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 138.23 134.79 718320000 0 0 0 37864000 39684000 58639000 42419000 38741000 35489000 59958000 78841000 95450000 58663000 54278000 118300000 18677 3690 17011 156482;156483;156484;156485;156486;156487;156488;156489;156490;156491;156492;156493 124572;124573;124574;124575;124576;124577;124578;124579;124580;124581;124582;124583;124584;124585;124586;124587;124588;124589 124582 18 GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR Unmodified 2704.1538 0.15383448 1354 P35527;CON__P35527 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 0 By MS/MS 10 0 1 1 80.548 80.114 3 2.0981E-25 92978 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 39.966 30.745 + 3815800 0 0 0 3815800 0 0 0 0 0 0 0 0 0 0 0 18678 1354 17012 156494 124590 124590 1 GGGGSQINSTR Unmodified 1032.4948 0.49483484 1531 P47974 ZFP36L2 Zinc finger protein 36, C3H1 type-like 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 6.4253 6.5123 2 0.037785 4393 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 37.191 22.04 4669900 0 0 0 0 0 1143400 1328800 1363900 833880 0 0 0 0 0 0 18679 1531 17013 156495;156496;156497;156498 124591 124591 1 GGGGTELGPPAPPRPR Unmodified 1514.7954 0.79537396 3047 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 2 41.979 42.219 3 0.0013706 47239 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 49.188 28.806 124520000 0 0 0 8886200 8819500 9419400 0 0 7784300 11532000 10625000 13609000 15531000 9587500 28727000 18680 3047 17014 156499;156500;156501;156502;156503;156504;156505;156506;156507;156508;156509 124592;124593;124594;124595;124596;124597;124598 124596 5 GGGGYTCQSGSGWDEFTK Unmodified 1892.7635 0.76354106 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 63.004 62.636 2 7.4728E-118 78279 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 214.81 206.3 204930000 0 58305000 0 43039000 7053000 9161700 7294300 7914300 3785700 10079000 10093000 16738000 14338000 7187400 9939000 18681 1029 17015 156510;156511;156512;156513;156514;156515;156516;156517;156518;156519;156520;156521;156522 124599;124600;124601;124602;124603;124604;124605;124606;124607;124608;124609;124610;124611;124612;124613 124603 15 GGGHVAQIYAIR Unmodified 1240.6677 0.66765425 1879 P62249 RPS16 40S ribosomal protein S16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 1 1 1 1 1 2 1 2 2 1 44.254 44.444 2;3 0.00042798 49534 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 76.143 63.187 532550000 0 0 0 26523000 32443000 43386000 30713000 31513000 23920000 38511000 51710000 53651000 53135000 72693000 74354000 18682 1879 17016 156523;156524;156525;156526;156527;156528;156529;156530;156531;156532;156533;156534;156535;156536;156537 124614;124615;124616;124617;124618;124619;124620;124621;124622;124623;124624;124625;124626;124627;124628;124629;124630;124631;124632;124633 124621 19 GGGLFLLAGPPASVETLGPR Unmodified 1908.0469 0.046897198 4144 Q9BTE6 AARSD1 Alanyl-tRNA editing protein Aarsd1 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 93.645 93.771 2 0.0040361 108746 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.809 29.576 6764600 0 0 0 0 0 0 0 0 0 0 0 1189700 0 0 5574800 18683 4144 17017 156538;156539 124634 124634 1 GGGLSLLPPPPGGK Unmodified 1245.7081 0.70812208 3406 Q8NC96 NECAP1 Adaptin ear-binding coat-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 75.184 75.219 2 0.002019 86738 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 52.725 28.695 41315000 0 0 0 1719000 1855500 3197200 3307600 0 0 5796600 4244800 6795000 3170400 3360200 7868500 18684 3406 17018 156540;156541;156542;156543;156544;156545;156546;156547;156548;156549 124635;124636;124637;124638;124639;124640 124636 6 GGGMSSLAGK Oxidation (M) 879.41202 0.41201641 3500 Q8TDB6 DTX3L E3 ubiquitin-protein ligase DTX3L yes yes 0 1 0 By MS/MS By matching 2 0 2 1 1 7.1768 4.4465 2 0.043785 6465 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 51.864 21.252 11669000 0 9231300 2438100 0 0 0 0 0 0 0 0 0 0 0 0 18685 3500 17019 156550;156551 124641 124641 1 GGGNQVSLLNVVMDLK Oxidation (M) 1658.8662 0.86615564 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 91.865 92.006 2 0.0021793 106575 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.077 26.81 6202700 0 0 0 0 0 0 0 0 0 2016900 971450 0 0 672130 2542200 18686 2451 17020 156552;156553;156554;156555 124642 124642 4022 1 GGGPAASLQNDLNQGGPGSTNSK Unmodified 2125.9988 0.99883739 3901 Q96K21 ZFYVE19 Abscission/NoCut checkpoint regulator yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 59.998 54.486 2;3 6.9615E-23 70050 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 132.44 127.05 31616000 0 31616000 0 0 0 0 0 0 0 0 0 0 0 0 0 18687 3901 17021 156556;156557;156558 124643;124644 124644 2 GGGPAGAGGEAPAALR Unmodified 1307.6582 0.65821178 2754 Q5RKV6 EXOSC6 Exosome complex component MTR3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.777 37.958 2 3.0333E-08 40866 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 90.653 76.934 82508000 0 0 0 3185300 4786500 4761100 4766900 4841800 3334200 7648600 8984400 12748000 6881700 8542000 12027000 18688 2754 17022 156559;156560;156561;156562;156563;156564;156565;156566;156567;156568;156569;156570 124645;124646;124647;124648;124649;124650;124651;124652;124653;124654;124655;124656 124652 12 GGGPMGPGSGPNLR Oxidation (M) 1268.5932 0.59316868 901 P0CG12 CHTF8 Chromosome transmission fidelity protein 8 homolog isoform 2 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.447 28.642 2 4.6375E-08 31318 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 94.616 83.465 168990000 0 0 0 10957000 12147000 9711400 13311000 13544000 11392000 13302000 25484000 19846000 10806000 12896000 15595000 18689 901 17023 156571;156572;156573;156574;156575;156576;156577;156578;156579;156580;156581;156582 124657;124658;124659;124660;124661;124662;124663;124664 124664 1162 8 GGGPMGPGSGPNLR Unmodified 1252.5983 0.59825406 901 P0CG12 CHTF8 Chromosome transmission fidelity protein 8 homolog isoform 2 yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 39.686 39.823 2 0.00038245 43016 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.499 60.544 86178000 0 0 0 5029700 3838900 0 5879600 9685300 5665000 9158700 11826000 0 11912000 9082200 14100000 18690 901 17023 156583;156584;156585;156586;156587;156588;156589;156590;156591;156592 124665;124666 124665 2 GGGPPREDVGAPLVTPSLLQMVR Oxidation (M) 2361.2475 0.24746427 4802 Q9P206 KIAA1522 Uncharacterized protein KIAA1522 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 83.438 83.544 3 3.4172E-06 96380 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.426 37.238 17002000 0 0 0 0 0 2956400 0 0 0 4915000 0 0 0 0 9130700 18691 4802 17024 156593;156594;156595 124667;124668 124668 6161 2 GGGPQAQSHGEAR Unmodified 1250.5752 0.57521043 3047 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 5.6196 5.7357 3 0.0015895 3637 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 55.314 43.448 49630000 0 0 0 0 16309000 0 0 6404800 0 0 8797600 8322200 9795800 0 0 18692 3047 17025 156596;156597;156598;156599;156600;156601;156602 124669;124670;124671;124672 124672 4 GGGPTSSEQIMK Oxidation (M) 1206.5551 0.55505184 2140 Q07812 BAX Apoptosis regulator BAX yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 15.384 15.641 2 0.0024975 14684 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 59.426 39.639 33304000 0 0 0 0 0 4472200 3057400 0 0 3865200 5410700 5621200 4342600 0 6535000 18693 2140 17026 156603;156604;156605;156606;156607;156608;156609 124673;124674;124675;124676;124677 124675 3443 5 GGGPTSSEQIMK Unmodified 1190.5601 0.56013721 2140 Q07812 BAX Apoptosis regulator BAX yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 28.198 28.351 2 0.0011685 29337 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 70.1 51.561 81676000 0 0 0 4172300 4259300 13010000 5718300 3980200 4258900 10830000 0 9193700 0 7797800 18455000 18694 2140 17026 156610;156611;156612;156613;156614;156615;156616;156617;156618;156619 124678;124679;124680;124681;124682;124683;124684;124685 124681 5 GGGQEERPFVAR Unmodified 1301.6476 0.64764709 4481 Q9HA64 FN3KRP Ketosamine-3-kinase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.516 24.719 3 0.0010997 26474 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 66.262 57.308 109450000 0 0 0 6087500 6000700 6318600 5038200 5611500 3589100 6542200 11538000 18309000 4653900 8561100 27197000 18695 4481 17027 156620;156621;156622;156623;156624;156625;156626;156627;156628;156629;156630;156631 124686;124687;124688;124689;124690;124691;124692;124693;124694;124695;124696 124688 10 GGGQIIPTAR Unmodified 968.54033 0.54032847 980;2481 P13639;Q15029 EEF2;EFTUD2 Elongation factor 2;116 kDa U5 small nuclear ribonucleoprotein component no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.856 37.037 2 0.0013917 41098 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 106.91 88.586 2515000000 0 0 0 102880000 80572000 99615000 92789000 102240000 66963000 168390000 272690000 285100000 154370000 220650000 868720000 18696 980;2481 17028 156632;156633;156634;156635;156636;156637;156638;156639;156640;156641;156642;156643 124697;124698;124699;124700;124701;124702;124703;124704;124705;124706;124707;124708;124709;124710;124711;124712 124701 10 GGGQIIPTARR Unmodified 1124.6414 0.6414395 980;2481 P13639;Q15029 EEF2;EFTUD2 Elongation factor 2;116 kDa U5 small nuclear ribonucleoprotein component no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 27.166 27.707 2 0.021535 28789 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.897 53.224 40491000 0 0 0 0 0 0 0 0 0 0 10424000 6353800 0 6962500 16750000 18697 980;2481 17029 156644;156645;156646;156647 124713 124713 0 GGGQLDLLGVSLASLK Unmodified 1526.8668 0.86680757 3559 Q8WVB6 CHTF18 Chromosome transmission fidelity protein 18 homolog yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 93.548 93.689 2 0.0010599 108613 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.7 45.267 2346000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2346000 18698 3559 17030 156648;156649 124714;124715 124715 2 GGGQSVQFTDIETLK Unmodified 1578.789 0.78895118 2072 Q02241 KIF23 Kinesin-like protein KIF23 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 74.256 74.312 2 0.0026301 85840 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 60.49 50.536 23756000 0 0 0 0 2938500 2850900 0 0 0 5092900 5252500 5267800 0 2353700 0 18699 2072 17031 156650;156651;156652;156653;156654;156655 124716;124717;124718 124718 3 GGGRVDEGPQPR Unmodified 1223.6007 0.6006969 4782 Q9NZT2 OGFR Opioid growth factor receptor yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 9.4917 9.6052 3 0.0022882 7124 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 60.49 52.765 86102000 0 0 0 5208100 6235600 6256500 7760700 6051100 3794600 5185300 0 15776000 7126500 6797400 15910000 18700 4782 17032 156656;156657;156658;156659;156660;156661;156662;156663;156664;156665;156666;156667 124719;124720;124721;124722;124723;124724;124725;124726;124727;124728;124729 124725 7 GGGSAAAAAAAAASGGAGSDNSVEHSDYR Unmodified 2534.1018 0.10179891 1412 P40424 PBX1 Pre-B-cell leukemia transcription factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 47.07 47.304 3 1.9824E-147 53060 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 176.09 173.2 128340000 0 0 0 0 7653000 10035000 8622300 9567000 8096000 12921000 15182000 9971500 9379500 13313000 23604000 18701 1412 17033 156668;156669;156670;156671;156672;156673;156674;156675;156676;156677;156678 124730;124731;124732;124733;124734;124735;124736;124737;124738;124739;124740;124741;124742;124743;124744;124745;124746;124747 124738 18 GGGSAAAAAAAAASGGAGSDNSVEHSDYRAK Unmodified 2733.2339 0.23387571 1412 P40424 PBX1 Pre-B-cell leukemia transcription factor 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 1 2 47.649 42.448 3;4 1.8693E-57 58000 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 108.02 105.48 59606000 44823000 0 14783000 0 0 0 0 0 0 0 0 0 0 0 0 18702 1412 17034 156679;156680;156681 124748;124749;124750 124748 3 GGGSAAAAAAAAASGGGVSPDNSIEHSDYR Unmodified 2673.2015 0.20151295 1413 P40425 PBX2 Pre-B-cell leukemia transcription factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 2 1 1 1 1 1 1 1 60.228 60.428 3 5.8976E-138 68939 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 155.73 152.86 52711000 0 0 0 0 2959800 0 5779500 0 0 10848000 8396300 7201800 6251900 0 11274000 18703 1413 17035 156682;156683;156684;156685;156686;156687;156688;156689;156690 124751;124752;124753;124754;124755;124756;124757;124758;124759;124760 124759 10 GGGSAAAAAAAAASGGGVSPDNSIEHSDYRSK Unmodified 2888.3285 0.32850438 1413 P40425 PBX2 Pre-B-cell leukemia transcription factor 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 59.939 53.898 4 2.5336E-104 72462 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 135.02 128.3 37861000 28574000 0 9286900 0 0 0 0 0 0 0 0 0 0 0 0 18704 1413 17036 156691;156692 124761;124762;124763 124761 3 GGGSGGGAGGAGGGVTEEQEGFADGFVK Unmodified 2411.0626 0.062559855 1052 P17275 JUNB Transcription factor jun-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 71.071 71.204 3 3.9679E-14 81923 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.956 50.53 59144000 0 0 0 0 5204600 7737300 5290600 0 4967100 5467200 6169200 8807000 0 5083200 10418000 18705 1052 17037 156693;156694;156695;156696;156697;156698;156699;156700;156701 124764;124765;124766;124767;124768;124769 124764 6 GGGTPDANSLAPPGK Unmodified 1337.6575 0.65754307 4113 Q9BRQ0 PYGO2 Pygopus homolog 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.575 37.755 2 6.9504E-05 41568 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 74.962 60.516 270900000 0 0 0 12392000 13588000 12852000 3468100 17337000 16191000 25123000 29315000 29846000 24929000 24121000 61743000 18706 4113 17038 156702;156703;156704;156705;156706;156707;156708;156709;156710;156711;156712;156713 124770;124771;124772;124773;124774;124775;124776;124777;124778;124779;124780 124775 10 GGGVGGFLPAMK Unmodified 1089.5641 0.56410038 5168 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.25 75.309 2 0.0013965 87473 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 68.224 58.145 150650000 0 0 0 6333800 7051100 8525700 11772000 10823000 7997500 12974000 15177000 17372000 7621400 9874900 35124000 18707 5168 17039 156714;156715;156716;156717;156718;156719;156720;156721;156722;156723;156724;156725 124781;124782;124783;124784;124785;124786;124787;124788;124789;124790;124791 124790 11 GGHERPPSPGLR Unmodified 1258.6531 0.65306682 3156 Q86UU1 PHLDB1 Pleckstrin homology-like domain family B member 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 15.554 15.951 3 0.0030285 14613 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.122 45.814 36889000 0 0 0 0 0 0 0 0 0 0 6771700 8509800 6380000 6186200 9041800 18708 3156 17040 156726;156727;156728;156729;156730 124792;124793;124794;124795 124792 4 GGHFYSAKPEILR Unmodified 1473.7728 0.7728476 1694 P52701 MSH6 DNA mismatch repair protein Msh6 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 46.511 46.8 3 0.0014218 52356 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 60.157 51.36 76048000 0 0 0 0 0 0 4300700 7741900 9925100 12565000 11631000 7325900 12069000 10490000 0 18709 1694 17041 156731;156732;156733;156734;156735;156736;156737;156738 124796;124797;124798;124799;124800 124796 5 GGHSGQLGPSSVAPSFRPEDELEHLTK Unmodified 2831.3838 0.38383441 3706 Q93052 LPP Lipoma-preferred partner yes yes 0 0 1 By MS/MS By MS/MS 2.67 0.471 1 2 2 1 80.953 75.879 4 2.0417E-05 97330 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.145 33.193 53583000 44553000 9029700 0 0 0 0 0 0 0 0 0 0 0 0 0 18710 3706 17042 156739;156740;156741 124801;124802 124802 2 GGHVTSMQPK Unmodified 1040.5073 0.50731378 202 O14686 KMT2D Histone-lysine N-methyltransferase 2D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 12.14 9.0157 2 0.0059744 13998 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.213 58.476 23309000 20917000 0 2392600 0 0 0 0 0 0 0 0 0 0 0 0 18711 202 17043 156742;156743;156744 124803;124804 124804 2 GGIADSVAK Unmodified 816.43413 0.43413207 4370 Q9H2M9 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes yes 0 0 0 By MS/MS 2 0 1 1 24.217 20.089 1 0.014017 26542 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.25 23.868 9403800 0 9403800 0 0 0 0 0 0 0 0 0 0 0 0 0 18712 4370 17044 156745 124805 124805 0 GGIDNPAITSDQELDDKK Unmodified 1914.9171 0.91706482 2224 Q13017 ARHGAP5 Rho GTPase-activating protein 5 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 52.733 47.389 3 0.00019212 58882 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 61.477 53.697 40572000 0 40572000 0 0 0 0 0 0 0 0 0 0 0 0 0 18713 2224 17045 156746;156747 124806;124807 124807 2 GGIGASENLENPPK Unmodified 1381.6838 0.68375782 242 O15027 SEC16A Protein transport protein Sec16A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 41.266 41.625 2 0.00052097 45414 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 68.107 37.544 53621000 0 0 0 0 0 0 11376000 0 0 0 0 0 0 17518000 24727000 18714 242 17046 156748;156749;156750;156751;156752 124808;124809;124810 124808 3 GGIHTADTK Unmodified 898.45084 0.45084476 155 O00442 RTCA RNA 3'-terminal phosphate cyclase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 2 3 1 4.1535 1.0782 2 0.013265 1148 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 83.206 33.848 336930000 9157200 316960000 10814000 0 0 0 0 0 0 0 0 0 0 0 0 18715 155 17047 156753;156754;156755;156756;156757;156758 124811;124812;124813;124814 124814 4 GGIMLPEK Oxidation (M) 859.44734 0.44733929 1853 P61604 HSPE1 10 kDa heat shock protein, mitochondrial yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 4 3.46 3 1 2 1 1 44.351 42.134 2 0.015101 46960 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 60.76 23.114 678420000 0 642680000 18762000 0 0 0 0 0 0 0 16977000 0 0 0 0 18716 1853 17048 156759;156760;156761;156762 124815;124816 124816 3007 2 GGIMLPEK Unmodified 843.45242 0.45242467 1853 P61604 HSPE1 10 kDa heat shock protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 53.477 46.559 2 0.031271 63289 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.189 50.191 1271200000 34980000 1236200000 0 0 0 0 0 0 0 0 0 0 0 0 0 18717 1853 17048 156763;156764 124817;124818 124818 2 GGINLTATCPQSELDAETVK Unmodified 2103.0154 0.015398653 5092 Q9Y295 DRG1 Developmentally-regulated GTP-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS 5 3.56 1 1 1 2 1 76.467 73.829 2 1.1462E-180 91315 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 263.56 246.42 419680000 0 390940000 0 0 0 0 0 0 0 0 0 0 0 0 28747000 18718 5092 17049 156765;156766;156767 124819;124820;124821 124819 3 GGIRYSTDVSVDEVK Unmodified 1623.8104 0.8104149 721 P00367;P49448 GLUD1;GLUD2 Glutamate dehydrogenase 1, mitochondrial;Glutamate dehydrogenase 2, mitochondrial yes no 0 0 1 By matching By MS/MS 2 0 2 1 1 58.32 52.273 3 0.0052165 65573 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 43.297 35.387 20958000 10634000 0 10324000 0 0 0 0 0 0 0 0 0 0 0 0 18719 721 17050 156768;156769 124822 124822 0 GGITQPNINDSLEITK Unmodified 1698.8788 0.87882882 1273 P30260 CDC27 Cell division cycle protein 27 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 73.074 72.464 2 1.6381E-27 83535 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 132.14 107.31 717430000 0 353540000 0 0 30671000 26825000 32475000 20922000 27019000 47968000 49821000 0 33749000 41226000 53212000 18720 1273 17051 156770;156771;156772;156773;156774;156775;156776;156777;156778;156779;156780;156781 124823;124824;124825;124826;124827 124823 4 GGIVDEGALLR Unmodified 1098.6033 0.60332266 304 O43175 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.99 68.07 2 0.0003288 77711 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 96.027 55.929 3833200000 0 0 0 181230000 143160000 411960000 231950000 219280000 176930000 428830000 404970000 424240000 317140000 304210000 589270000 18721 304 17052 156782;156783;156784;156785;156786;156787;156788;156789;156790;156791;156792;156793 124828;124829;124830;124831;124832;124833;124834;124835;124836;124837;124838;124839;124840;124841;124842 124840 15 GGIVGMTLPIAR Unmodified 1183.6747 0.67471346 4051 Q99714 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 82.461 82.617 2 0.00015765 95285 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.731 52.468 34224000 0 0 0 0 0 3189300 5322300 4192700 0 0 7607900 0 0 0 13912000 18722 4051 17053 156794;156795;156796;156797;156798 124843;124844;124845;124846 124844 4 GGIVGMTLPIAR Oxidation (M) 1199.6696 0.66962808 4051 Q99714 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 70.214 70.411 2 0.0067106 80873 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 46.819 37.956 37732000 0 0 0 0 0 0 4310600 4791600 0 5629700 7501900 8265800 3933000 3299900 0 18723 4051 17053 156799;156800;156801;156802;156803;156804;156805 124847;124848 124847 5551 2 GGIVLIDAHK Unmodified 1021.592 0.59202969 2573 Q15751 HERC1 Probable E3 ubiquitin-protein ligase HERC1 yes yes 0 0 0 By MS/MS 2 0 1 1 52.996 49.083 2 0.01422 61680 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 69.825 24.743 4603600 0 0 4603600 0 0 0 0 0 0 0 0 0 0 0 0 18724 2573 17054 156806 124849 124849 1 GGKPEPPAMPQPVPTA Oxidation (M) 1588.7919 0.79192806 1156 P23396 RPS3 40S ribosomal protein S3 yes yes 0 1 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.69 2.88 3 2 24 2 3 2 2 2 2 2 2 2 2 2 2 2 2 45.061 44.189 2 5.7097E-20 50195 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 116.71 110.47 1076700000 9105700 69713000 0 57811000 55710000 61152000 55337000 46934000 51244000 98021000 92034000 158350000 150490000 80592000 90197000 18725 1156 17055 156807;156808;156809;156810;156811;156812;156813;156814;156815;156816;156817;156818;156819;156820;156821;156822;156823;156824;156825;156826;156827;156828;156829;156830;156831;156832;156833;156834;156835 124850;124851;124852;124853;124854;124855;124856;124857;124858;124859;124860;124861;124862;124863;124864;124865;124866;124867;124868;124869;124870;124871;124872;124873;124874;124875 124864 1671 24 GGKPEPPAMPQPVPTA Unmodified 1572.797 0.79701344 1156 P23396 RPS3 40S ribosomal protein S3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.79 2.98 1 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65.409 65.448 2 3.496E-19 70277 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 113.77 107.23 1843300000 27637000 266300000 0 66816000 91997000 99246000 60141000 83775000 61327000 113040000 174460000 191100000 149040000 166130000 292260000 18726 1156 17055 156836;156837;156838;156839;156840;156841;156842;156843;156844;156845;156846;156847;156848;156849 124876;124877;124878;124879;124880;124881;124882;124883;124884;124885;124886;124887;124888;124889;124890 124879 15 GGLFTALEK Unmodified 934.51238 0.51238239 3184 Q86WJ1 CHD1L Chromodomain-helicase-DNA-binding protein 1-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 71.365 71.496 2 0.010476 82317 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 64.265 32.31 44004000 0 0 0 0 2642300 5015700 3799600 3082800 0 5512400 4766900 5232600 4125000 3345800 6480600 18727 3184 17056 156850;156851;156852;156853;156854;156855;156856;156857;156858;156859 124891;124892;124893 124891 3 GGLGAPPLQSAR Unmodified 1122.6146 0.61455605 2053 Q01433 AMPD2 AMP deaminase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.741 46.907 2 0.0056036 52764 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 53.751 36.365 107340000 0 0 0 4334600 4899000 5819800 6149800 4871500 4495300 6987100 13582000 15158000 9584300 8730200 22726000 18728 2053 17057 156860;156861;156862;156863;156864;156865;156866;156867;156868;156869;156870;156871 124894;124895;124896;124897 124894 4 GGLGLILK Unmodified 769.50617 0.5061748 549 O75832 PSMD10 26S proteasome non-ATPase regulatory subunit 10 yes yes 0 0 0 By MS/MS 10 0 1 1 71.503 71.611 2 0.038617 82568 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 50.966 7.9657 11838000 0 0 0 0 0 0 0 0 0 0 0 0 11838000 0 0 18729 549 17058 156872 124898 124898 1 GGLLTSEEDSGFSTSPK Unmodified 1710.7948 0.79482442 5074 Q9UQR1 ZNF148 Zinc finger protein 148 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 64.215 62.871 2 1.9906E-52 71994 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 162.22 136.18 633480000 5501900 237930000 3351900 29309000 22719000 38183000 26020000 23136000 18494000 39234000 36559000 39755000 31435000 33555000 48294000 18730 5074 17059 156873;156874;156875;156876;156877;156878;156879;156880;156881;156882;156883;156884;156885;156886;156887;156888 124899;124900;124901;124902;124903;124904;124905;124906;124907;124908;124909;124910;124911;124912;124913;124914;124915;124916 124913 18 GGLMVSEMESHPPSQGPGDGER 2 Oxidation (M) 2284.9689 0.96885917 494 O75400 PRPF40A Pre-mRNA-processing factor 40 homolog A yes yes 0 2 0 By matching By MS/MS By matching By matching By matching 10 0 5 1 1 1 1 1 37.257 37.264 3 4.1925E-05 41659 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 43.534 41.673 16889000 0 0 0 1777700 3175000 0 0 0 0 3381400 4321700 0 4233600 0 0 18731 494 17060 156889;156890;156891;156892;156893 124917 124917 641;642 1 GGLNTILK Unmodified 814.49125 0.49125301 2966 Q6R327 RICTOR Rapamycin-insensitive companion of mTOR yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 52.372 52.634 2 0.04249 59872 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 49.59 4.6169 20428000 0 0 0 1397400 0 0 0 3741100 0 0 2924900 4232300 2910100 0 5222400 18732 2966 17061 156894;156895;156896;156897;156898;156899 124918 124918 1 GGLNTPLHESDFSGVTPQR Unmodified 2010.9759 0.9759171 4010 Q99459 CDC5L Cell division cycle 5-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.566 65.653 3 9.2304E-06 74917 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 65.808 56.02 293480000 0 0 0 16061000 15663000 21300000 16787000 16656000 16751000 28549000 33132000 33687000 23922000 23372000 47600000 18733 4010 17062 156900;156901;156902;156903;156904;156905;156906;156907;156908;156909;156910;156911 124919;124920;124921;124922;124923;124924;124925;124926;124927 124920 9 GGLQSQSGTVVTTEIK Unmodified 1603.8417 0.84171503 4004 Q99081 TCF12 Transcription factor 12 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 52.536 52.707 2 0.011448 59586 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 47.288 27.629 26564000 0 0 0 0 1905000 2934900 1671500 2051600 0 4159200 3609500 3106200 3524600 3601300 0 18734 4004 17063 156912;156913;156914;156915;156916;156917;156918;156919;156920 124928;124929;124930 124929 3 GGLSDDHVLILPIGHYQSVVELSAEVVEEVEK Unmodified 3459.7773 0.77733044 2862 Q69YN2 CWF19L1 CWF19-like protein 1 yes yes 0 0 0 By MS/MS By matching 2.33 0.471 2 1 2 1 101.12 95.656 4 1.6141E-135 120043 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 153.01 147.69 40452000 36196000 4256100 0 0 0 0 0 0 0 0 0 0 0 0 0 18735 2862 17064 156921;156922;156923 124931;124932 124932 2 GGLTSPIFCSTK Unmodified 1266.6278 0.62782285 4999 Q9ULL5 PRR12 Proline-rich protein 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 65.182 65.335 2 0.011462 74566 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 40.727 13.838 26608000 0 0 0 0 1634000 0 0 0 0 6631600 0 6357900 3753000 0 8231700 18736 4999 17065 156924;156925;156926;156927;156928;156929 124933;124934;124935 124935 3 GGLVGQAPMPVPEEK Oxidation (M) 1523.7654 0.76537896 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS 10 0 21 2 1 2 2 2 2 2 2 2 1 1 2 51.628 51.842 2 6.5409E-15 58368 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 103.31 77.653 230590000 0 0 0 9207800 10239000 22139000 21422000 8747100 21627000 22831000 25196000 36609000 18747000 12417000 21409000 18737 4139 17066 156930;156931;156932;156933;156934;156935;156936;156937;156938;156939;156940;156941;156942;156943;156944;156945;156946;156947;156948;156949;156950 124936;124937;124938;124939;124940;124941;124942;124943;124944;124945;124946;124947;124948;124949 124936 5627 11 GGLVGQAPMPVPEEK Unmodified 1507.7705 0.77046434 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 66.908 66.934 2 7.2745E-05 76852 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 94.616 74.313 150580000 0 0 0 9889900 10680000 11836000 12725000 14000000 11311000 18066000 19398000 25700000 16971000 0 0 18738 4139 17066 156951;156952;156953;156954;156955;156956;156957;156958;156959;156960;156961 124950;124951;124952;124953;124954;124955;124956;124957;124958;124959;124960 124950 11 GGLVSDAYGEDDFSR Unmodified 1586.6849 0.68488004 4907 Q9UHR5 SAP30BP SAP30-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 62.96 63.146 2 3.1366E-20 72242 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 115.33 100.91 157230000 0 0 0 0 11560000 0 12835000 0 8184100 16850000 22388000 22445000 18541000 16082000 28350000 18739 4907 17067 156962;156963;156964;156965;156966;156967;156968;156969;156970 124961;124962;124963;124964;124965;124966;124967;124968;124969;124970;124971;124972 124967 11 GGLYIVTEYMAK Unmodified 1343.6795 0.67952407 1438 P41240 CSK Tyrosine-protein kinase CSK yes yes 0 0 0 By MS/MS 2 0 1 1 89.677 81.547 2 0.012356 105999 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.243 0.81779 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18740 1438 17068 156971 124973 124973 1 GGLYSQEQAAK Unmodified 1150.5619 0.56185177 4674 Q9NVN8 GNL3L Guanine nucleotide-binding protein-like 3-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 21.647 21.414 2 5.3055E-07 26793 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.31 109.17 106550000 0 30422000 0 6291300 6834500 13376000 0 5889700 7817300 0 0 10021000 8980200 8480000 8439500 18741 4674 17069 156972;156973;156974;156975;156976;156977;156978;156979;156980;156981;156982 124974;124975;124976;124977;124978;124979;124980;124981;124982;124983;124984;124985;124986 124978 12 GGMALALAVTK Unmodified 1030.5845 0.58450147 916 P10155 TROVE2 60 kDa SS-A/Ro ribonucleoprotein yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 77.849 72.388 2 0.0036492 91203 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.287 59.138 113620000 90148000 23471000 0 0 0 0 0 0 0 0 0 0 0 0 0 18742 916 17070 156983;156984;156985 124987;124988 124987 2 GGMALALAVTK Oxidation (M) 1046.5794 0.57941609 916 P10155 TROVE2 60 kDa SS-A/Ro ribonucleoprotein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 2 1 1 1 1 59.186 53.547 2 0.00062822 66167 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 96.331 71.408 45301000 32024000 9044800 4232700 0 0 0 0 0 0 0 0 0 0 0 0 18743 916 17070 156986;156987;156988 124989;124990;124991;124992 124990 1182 4 GGMGAALLSDPDK Unmodified 1230.5914 0.59143734 4721 Q9NX74 DUS2 tRNA-dihydrouridine(20) synthase [NAD(P)+]-like yes yes 0 0 0 By MS/MS 2 0 1 1 64.418 58.51 2 0.013428 74897 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.132 50.892 31385000 0 31385000 0 0 0 0 0 0 0 0 0 0 0 0 0 18744 4721 17071 156989 124993 124993 1 GGMGSGGLATGIAGGLAGMGGIQNEK 2 Oxidation (M) 2292.0838 0.083829344 814 P05783 KRT18 Keratin, type I cytoskeletal 18 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 73.093 73.156 2;3 2.6083E-63 84257 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 115.88 106.19 1882900000 0 0 0 55786000 128490000 180290000 103430000 189940000 74988000 208510000 188640000 259510000 130250000 135380000 227680000 18745 814 17072 156990;156991;156992;156993;156994;156995;156996;156997;156998;156999;157000;157001;157002;157003;157004;157005;157006;157007;157008;157009;157010;157011;157012;157013 124994;124995;124996;124997;124998;124999;125000;125001;125002;125003;125004;125005;125006;125007;125008;125009;125010;125011 125010 978;979 15 GGMGSGGLATGIAGGLAGMGGIQNEK Oxidation (M) 2276.0889 0.088914722 814 P05783 KRT18 Keratin, type I cytoskeletal 18 yes yes 0 1 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS 10 0 17 1 1 1 3 1 3 1 1 1 2 2 80.955 81.075 2;3 9.3624E-52 94346 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 108.64 100.45 296460000 0 0 0 0 6363600 4330500 2943300 54131000 3386000 72251000 9714800 11921000 4836400 23947000 102630000 18746 814 17072 157014;157015;157016;157017;157018;157019;157020;157021;157022;157023;157024;157025;157026;157027;157028;157029;157030 125012;125013;125014;125015;125016;125017;125018;125019;125020 125014 978;979 9 GGMGSGGLATGIAGGLAGMGGIQNEK Unmodified 2260.094 0.0940001 814 P05783 KRT18 Keratin, type I cytoskeletal 18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 80.261 79.448 3 1.6885E-10 97348 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.789 52.295 51716000 0 0 1607700 0 0 0 0 9635100 0 12258000 0 0 0 0 28215000 18747 814 17072 157031;157032;157033;157034 125021;125022;125023;125024 125022 4 GGNASGEPGLDQR Unmodified 1256.5745 0.57454173 3061 Q7LBC6 KDM3B Lysine-specific demethylase 3B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.283 19.479 2 1.1188E-33 18535 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 170.89 149.99 530020000 0 0 0 33298000 35593000 31715000 38854000 40486000 30092000 58548000 38977000 60418000 51327000 45707000 65006000 18748 3061 17073 157035;157036;157037;157038;157039;157040;157041;157042;157043;157044;157045;157046 125025;125026;125027;125028;125029;125030;125031;125032;125033;125034;125035;125036;125037;125038;125039;125040;125041;125042 125037 17 GGNAVVDGCGK Unmodified 1032.4658 0.4658429 1540 P48506 GCLC Glutamate--cysteine ligase catalytic subunit yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 12.67 9.0336 2 0.04343 14121 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.04 50.369 6786200 3602700 3183600 0 0 0 0 0 0 0 0 0 0 0 0 0 18749 1540 17074 157047;157048 125043 125043 0 GGNCDLSHQERLQSK Unmodified 1727.8009 0.80092962 4388 Q9H410 DSN1 Kinetochore-associated protein DSN1 homolog yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 20.77 17.003 3 0.024036 22063 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 35.659 25.024 21086000 13283000 0 7803100 0 0 0 0 0 0 0 0 0 0 0 0 18750 4388 17075 157049;157050 125044;125045 125045 2 GGNEPPPPPPPFR Unmodified 1357.6779 0.67788459 3955 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.258 55.387 2 0.00043284 61845 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.974 69.45 92980000 0 0 0 5221500 4335400 6036400 3620900 8138900 6577600 8956900 7760100 12690000 9141500 9998100 10502000 18751 3955 17076 157051;157052;157053;157054;157055;157056;157057;157058;157059;157060;157061;157062 125046;125047;125048;125049;125050;125051;125052;125053;125054;125055;125056;125057;125058;125059 125050 12 GGNFGFGDSR Unmodified 1012.4363 0.43625733 1141 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.423 39.602 2 0.0044278 43771 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 72.879 62.063 1198200000 0 0 0 49823000 57469000 49247000 73448000 75458000 55939000 75043000 181770000 130240000 92056000 118700000 238970000 18752 1141 17077 157063;157064;157065;157066;157067;157068;157069;157070;157071;157072;157073;157074 125060;125061;125062;125063;125064;125065;125066;125067;125068;125069;125070;125071 125066 12 GGNFGGRSSGPYGGGGQYFAK Unmodified 2019.9187 0.91873657 891 P09651;Q32P51 HNRNPA1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 yes no 0 0 1 By MS/MS 2 0 1 1 57.804 49.624 3 0.0021148 67576 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.116 38.944 20124000 20124000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18753 891 17078 157075 125072;125073 125072 2 GGNGGGKPPSGPNR Unmodified 1250.6116 0.61159593 3326 Q8N3U4 STAG2 Cohesin subunit SA-2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 6.2752 6.3872 3 0.015161 3687 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 24.425 13.815 20808000 0 0 0 1648800 1635000 1814700 2348700 0 0 1885900 2837100 2901200 1550200 1637000 2549900 18754 3326 17079 157076;157077;157078;157079;157080;157081;157082;157083;157084;157085 125074;125075;125076 125075 3 GGNIDVHPSEK Unmodified 1151.5571 0.55710075 3671 Q92845 KIFAP3 Kinesin-associated protein 3 yes yes 0 0 0 By MS/MS 3 0 1 1 19.586 15.815 3 0.031396 19613 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 37.144 15.398 8765700 0 8765700 0 0 0 0 0 0 0 0 0 0 0 0 0 18755 3671 17080 157086 125077 125077 1 GGNIGDGGGAADR Unmodified 1115.4956 0.49556312 1755 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 9.4195 9.5535 2 0.0018578 7996 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 61.344 50.471 85741000 0 0 0 4068400 1929100 5557600 3982300 2020500 2023700 3632000 15323000 11275000 5063100 6232100 24634000 18756 1755 17081 157087;157088;157089;157090;157091;157092;157093;157094;157095;157096;157097;157098 125078;125079;125080;125081;125082;125083;125084;125085 125084 8 GGNPFLFR Unmodified 906.47119 0.47118627 4488 Q9HAS0 C17orf75 Protein Njmu-R1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 68.622 68.704 2 0.043141 78017 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 49.358 32.432 47760000 0 0 0 2938100 2169600 0 4125200 3120200 0 6699800 5209600 5807900 4896100 4979700 7813700 18757 4488 17082 157099;157100;157101;157102;157103;157104;157105;157106;157107;157108 125086 125086 1 GGNTMTGDAIDYLVK Unmodified 1553.7396 0.73955814 4052 Q99715 COL12A1 Collagen alpha-1(XII) chain yes yes 0 0 0 By MS/MS 2 0 1 1 83.941 79.221 2 0.046067 98529 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 54.683 39.054 30871000 0 30871000 0 0 0 0 0 0 0 0 0 0 0 0 0 18758 4052 17083 157109 125087 125087 1 GGNVFAALIQDQSEEEEEEEK Unmodified 2350.0448 0.044844105 3421 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 yes yes 0 0 0 By MS/MS 2 0 1 1 91.256 83.126 2 2.2272E-54 107899 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 157.68 127.24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18759 3421 17084 157110 125088 125088 1 GGPAEGQLQENDR Unmodified 1369.6222 0.6222202 2136 Q07157 TJP1 Tight junction protein ZO-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 21.381 21.536 2 1.4939E-09 22556 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 116.23 103.71 25353000 0 0 0 5448600 0 7248200 4412700 0 0 0 0 0 0 3707500 4535800 18760 2136 17085 157111;157112;157113;157114;157115;157116;157117;157118 125089;125090;125091;125092;125093;125094;125095;125096 125089 8 GGPASVPSSSPGTSVK Unmodified 1413.71 0.70997257 306 O43237 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.229 32.416 2 0.00028751 35494 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 87.001 76.629 219870000 0 0 0 10781000 11183000 16048000 16065000 16789000 13519000 22643000 24218000 20228000 22072000 19415000 26913000 18761 306 17086 157119;157120;157121;157122;157123;157124;157125;157126;157127;157128;157129;157130 125097;125098;125099;125100;125101;125102;125103;125104;125105 125098 8 GGPDFSNLEK Unmodified 1062.4982 0.49818889 3561 Q8WVJ2 NUDCD2 NudC domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 48.74 47.898 2 0.00039375 58077 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 117.89 48.692 446550000 0 299950000 3731700 6615300 3434600 11421000 8988000 6520000 5950800 16550000 20527000 13811000 10903000 11776000 26367000 18762 3561 17087 157131;157132;157133;157134;157135;157136;157137;157138;157139;157140;157141;157142;157143;157144;157145 125106;125107;125108;125109 125108 3 GGPGAAPGGASPASSSSAASSPSSGR Unmodified 2113.9625 0.96245188 4227 Q9BXK1 KLF16 Krueppel-like factor 16 yes yes 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 2 2 2 1 2 2 2 2 2 2 26.57 26.745 2;3 2.1428E-13 27664 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.965 51.763 49847000 0 0 0 1781900 3451200 3789400 5878500 1920500 3584500 2029400 10216000 0 5057500 4129200 8008800 18763 4227 17088 157146;157147;157148;157149;157150;157151;157152;157153;157154;157155;157156;157157;157158;157159;157160;157161;157162;157163;157164;157165 125110;125111;125112;125113;125114;125115 125112 5 GGPGAAPGGASPASSSSAASSPSSGRAPGAAPSAAAK Unmodified 3006.4391 0.43911746 4227 Q9BXK1 KLF16 Krueppel-like factor 16 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 35.544 35.805 3 7.5776E-31 38491 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.841 52.401 57768000 0 0 0 3521900 0 3796300 6283500 0 0 5954900 7618900 7534600 7182100 5680600 10195000 18764 4227 17089 157166;157167;157168;157169;157170;157171;157172;157173;157174 125116;125117;125118;125119;125120;125121;125122;125123;125124;125125 125119 10 GGPGGELPR Unmodified 838.42972 0.42971539 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 24.416 24.577 2 0.0033037 26554 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 93.374 44.015 955590000 0 0 0 77216000 95033000 87402000 73562000 74838000 56458000 101890000 74067000 111360000 93527000 110230000 0 18765 2102 17090 157175;157176;157177;157178;157179;157180;157181;157182;157183;157184;157185 125126;125127;125128;125129;125130;125131;125132;125133;125134;125135;125136;125137;125138;125139;125140;125141;125142 125142 16 GGPGGELPRGPAGLGPR Unmodified 1543.8219 0.82192306 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 53.886 54.023 3 0.00024691 60863 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 61.265 51.344 594440000 0 0 0 42590000 36698000 41210000 60613000 46487000 38059000 50112000 68452000 65537000 40780000 45987000 57911000 18766 2102 17091 157186;157187;157188;157189;157190;157191;157192;157193;157194;157195;157196;157197 125143;125144;125145;125146;125147;125148;125149;125150;125151;125152;125153;125154;125155;125156;125157;125158;125159;125160;125161;125162 125154 18 GGPGGPGGPGGPMGR Unmodified 1206.5564 0.55638924 2065 Q01844 EWSR1 RNA-binding protein EWS yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 27.407 27.578 2 1.8261E-11 29476 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 98.048 79.376 44827000 0 0 0 3618000 2968000 0 4161500 3467400 0 6492800 4515900 0 4122400 7193200 8287700 18767 2065 17092 157198;157199;157200;157201;157202;157203;157204;157205;157206;157207 125163;125164;125165;125166;125167;125168;125169;125170;125171 125166 8 GGPGGPGGPGGPMGR Oxidation (M) 1222.5513 0.55130386 2065 Q01844 EWSR1 RNA-binding protein EWS yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 2 1 1 1 1 15.322 15.557 2 0.00018146 15181 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 70.908 55.758 15673000 0 0 0 0 928230 0 3187700 0 1023600 0 2466400 4025900 0 0 4041100 18768 2065 17092 157208;157209;157210;157211;157212;157213;157214 125172;125173;125174;125175 125172 3358 2 GGPGPASARPSESK Unmodified 1296.6422 0.64222736 3938 Q96NU1 SAMD11 Sterile alpha motif domain-containing protein 11 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 1 2 2 2 2 2 2 2 2 2 9.8317 9.9745 2;3 0.0011759 7780 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.184 25.375 171640000 0 0 0 12061000 7491200 1765000 15557000 9786300 7433400 14016000 31141000 21405000 15108000 12070000 23802000 18769 3938 17093 157215;157216;157217;157218;157219;157220;157221;157222;157223;157224;157225;157226;157227;157228;157229;157230;157231;157232;157233;157234;157235;157236;157237 125176;125177;125178;125179;125180;125181;125182;125183;125184;125185;125186;125187;125188 125178 8 GGPGPGPGPYHR Unmodified 1147.5523 0.55229014 3955 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 1 1 2 1 2 3 1 1 2 2 2 18.178 18.379 2;3 0.00033213 17725 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 63.408 59.36 219590000 0 0 0 13504000 13070000 13462000 16882000 13094000 15294000 26691000 15970000 20329000 21217000 18720000 31353000 18770 3955 17094 157238;157239;157240;157241;157242;157243;157244;157245;157246;157247;157248;157249;157250;157251;157252;157253;157254;157255;157256 125189;125190;125191;125192;125193;125194;125195;125196;125197;125198;125199;125200;125201;125202 125196 9 GGPGSAVSPYPTFNPSSDVAALHK Unmodified 2355.1495 0.14952437 773 P04083 ANXA1 Annexin A1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 4 2 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 78.505 77.033 3 3.7603E-173 88720 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 201.61 196.9 9058600000 1508700000 5866600000 432200000 14852000 18691000 61089000 34097000 124920000 37458000 86420000 116170000 155740000 60379000 106790000 434410000 18771 773 17095 157257;157258;157259;157260;157261;157262;157263;157264;157265;157266;157267;157268;157269;157270;157271;157272;157273;157274 125203;125204;125205;125206;125207;125208;125209;125210;125211;125212;125213;125214;125215;125216;125217;125218;125219;125220;125221;125222;125223;125224;125225;125226;125227;125228;125229;125230;125231 125211 29 GGPGSGGHGPLR Unmodified 1047.521 0.52099001 3312 Q8N1G0 ZNF687 Zinc finger protein 687 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 11.23 11.396 2 0.0018078 10412 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 64.841 48.301 10986000 0 0 0 0 0 0 1113700 1027000 1093000 2399600 0 3180200 2172300 0 0 18772 3312 17096 157275;157276;157277;157278;157279;157280 125232;125233;125234 125233 3 GGPGSTLSFVGK Unmodified 1105.5768 0.57677356 4087 Q9BQ61 C19orf43 Uncharacterized protein C19orf43 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 58.002 57.476 2 1.8029E-06 64410 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 114.5 93.93 612060000 95733000 0 0 31475000 36401000 39494000 36288000 35582000 27628000 32711000 49987000 55213000 62117000 37685000 71747000 18773 4087 17097 157281;157282;157283;157284;157285;157286;157287;157288;157289;157290;157291;157292;157293 125235;125236;125237;125238;125239;125240;125241;125242;125243;125244;125245;125246;125247 125243 10 GGPILAPEEIK Unmodified 1122.6285 0.62847478 4455 Q9H8V3 ECT2 Protein ECT2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 61.754 61.846 2 0.0029539 69401 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 65.305 37.224 671330000 0 0 0 43982000 44493000 49064000 48113000 0 45721000 57785000 74864000 88809000 61301000 65220000 91975000 18774 4455 17098 157294;157295;157296;157297;157298;157299;157300;157301;157302;157303;157304 125248;125249;125250;125251;125252;125253;125254;125255;125256;125257;125258;125259;125260;125261;125262;125263 125257 16 GGPLPEPRPLMAEPR Unmodified 1615.8504 0.850446 1329 P33240 CSTF2 Cleavage stimulation factor subunit 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.651 64.74 3 0.0061477 74191 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 39.005 32.172 87874000 0 0 0 2069400 3257400 5232000 3778700 6981500 3483500 5596300 8760300 9871500 5817100 11442000 21585000 18775 1329 17099 157305;157306;157307;157308;157309;157310;157311;157312;157313;157314;157315;157316 125264;125265;125266;125267;125268;125269 125267 3 GGPNIITLADIVK Unmodified 1309.7606 0.76055158 1964 P68400;Q8NEV1 CSNK2A1;CSNK2A3 Casein kinase II subunit alpha;Casein kinase II subunit alpha 3 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 90.499 90.654 2 1.2082E-05 105018 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 112.83 79.456 43851000 0 0 0 0 0 0 0 0 0 0 7759700 6347100 0 0 29744000 18776 1964 17100 157317;157318;157319;157320 125270;125271;125272;125273 125270 3 GGPPGPPISR Unmodified 933.50321 0.50321468 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 33.038 33.211 2 0.00091675 36292 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 114.28 81.811 1037800000 0 0 0 67451000 70600000 78885000 77448000 78905000 65493000 111210000 112370000 143060000 109810000 0 122540000 18777 2102 17101 157321;157322;157323;157324;157325;157326;157327;157328;157329;157330;157331 125274;125275;125276;125277;125278;125279;125280;125281;125282;125283;125284;125285;125286;125287 125281 14 GGPPGQFHDNANGGQNGTVQEIMIPAGK Oxidation (M) 2806.3093 0.30928926 3690 Q92945 KHSRP Far upstream element-binding protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 63.85 63.907 3 1.1621E-31 73189 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 82.849 76.687 76587000 0 0 0 6594900 6838200 0 10013000 7864000 0 10993000 0 13423000 0 7145800 13716000 18778 3690 17102 157332;157333;157334;157335;157336;157337;157338;157339 125288;125289;125290;125291;125292;125293;125294 125293 5248 7 GGPPGQFHDNANGGQNGTVQEIMIPAGK Unmodified 2790.3144 0.31437464 3690 Q92945 KHSRP Far upstream element-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 69.716 69.728 3 3.4891E-14 80077 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 52.707 50.234 63204000 0 0 0 2426300 2374300 4169200 0 4104000 0 7967200 10284000 0 0 8581300 23297000 18779 3690 17102 157340;157341;157342;157343;157344;157345;157346;157347 125295;125296;125297;125298 125297 4 GGPRPVSSSIDPSLLSTK Unmodified 1796.9632 0.96322715 3432 Q8NEY1 NAV1 Neuron navigator 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.433 65.52 3 0.00091067 74876 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 48.006 38.723 136650000 0 0 0 6616500 7913300 10892000 10989000 10012000 10199000 12928000 12065000 16841000 9457500 11974000 16766000 18780 3432 17103 157348;157349;157350;157351;157352;157353;157354;157355;157356;157357;157358;157359 125299;125300;125301;125302;125303;125304;125305;125306;125307;125308;125309 125300 11 GGPSHSAGANLRR Unmodified 1278.6541 0.65412945 4457 Q9H8Y5 ANKZF1 Ankyrin repeat and zinc finger domain-containing protein 1 yes yes 0 0 1 By matching By MS/MS By matching By MS/MS By matching By matching By matching 10 0 7 1 1 1 1 1 1 1 7.2427 7.3897 3 0.033908 5888 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 26.124 9.9861 22213000 0 0 0 0 1614000 0 2271300 0 0 4484400 0 3839100 2107000 3409900 4487200 18781 4457 17104 157360;157361;157362;157363;157364;157365;157366 125310 125310 1 GGPSPGDVEAIK Unmodified 1125.5666 0.5666028 892 P09661 SNRPA1 U2 small nuclear ribonucleoprotein A' yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.18 3.31 1 1 2 13 2 2 1 1 1 1 1 1 1 1 1 2 1 1 46.527 46.058 2 2.6275E-05 46021 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.692 36.732 1282800000 24414000 237540000 0 50553000 53402000 53565000 66826000 63653000 56539000 102010000 105020000 122670000 103060000 98673000 144880000 18782 892 17105 157367;157368;157369;157370;157371;157372;157373;157374;157375;157376;157377;157378;157379;157380;157381;157382;157383 125311;125312;125313;125314;125315;125316;125317;125318;125319;125320;125321;125322;125323;125324 125315 11 GGPTPQEAIQR Unmodified 1152.5887 0.58873523 4390 Q9H444 CHMP4B Charged multivesicular body protein 4b yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 30.21 30.838 2 0.00027892 33137 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 92.838 74.802 89759000 0 0 0 0 0 0 0 0 0 0 15780000 29781000 0 0 44198000 18783 4390 17106 157384;157385;157386;157387;157388 125325;125326;125327;125328;125329;125330 125327 6 GGPTSHPSPVPPPASSPSPLSGSALCGGK Unmodified 2682.3072 0.307164 1607 P49848 TAF6 Transcription initiation factor TFIID subunit 6 yes yes 0 0 0 By MS/MS 2 0 1 1 74.518 66.388 3 8.2425E-17 87515 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.395 65.38 24584000 24584000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18784 1607 17107 157389 125331 125331 1 GGPVQVLEDEELK Unmodified 1411.7195 0.71947463 2256 Q13228 SELENBP1 Selenium-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.83 3.67 6 2 4 1 6 1 1 1 1 1 76.561 73.992 2;3 2.9025E-36 92371 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 181.53 156.09 2986400000 66866000 2731200000 40838000 0 0 0 0 0 0 0 23200000 25519000 0 23215000 75541000 18785 2256 17108 157390;157391;157392;157393;157394;157395;157396;157397;157398;157399;157400;157401 125332;125333;125334;125335;125336;125337;125338;125339;125340;125341 125332 8 GGQAHHGTQNPSQDQGNSPSGK Unmodified 2187.9642 0.96418321 2074 Q02383 SEMG2 Semenogelin-2 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 5.5938 5.7687 4 0.0027457 3434 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 29.842 21.242 6906200 0 0 0 0 0 0 0 4126200 0 0 0 0 2780000 0 0 18786 2074 17109 157402;157403 125342 125342 1 GGQEPDRPPLSGFLPPITPPEK Unmodified 2328.2114 0.21139634 4981 Q9UKZ1 CNOT11 CCR4-NOT transcription complex subunit 11 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 86.501 86.611 3 1.4883E-05 100111 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.255 42.543 104970000 0 0 0 0 3829000 9279100 3343600 9030200 7672700 12462000 9828800 14213000 0 6832300 28481000 18787 4981 17110 157404;157405;157406;157407;157408;157409;157410;157411;157412;157413 125343;125344;125345;125346;125347;125348;125349;125350;125351;125352;125353;125354 125346 12 GGQIGLQAPGLSVSGPQGHLESGSGK Unmodified 2417.2299 0.22989995 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 73.003 71.844 3 2.8866E-56 91667 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 105.03 101.15 395780000 28568000 23683000 4462500 8451100 15452000 24803000 27075000 31189000 23932000 24161000 29091000 39328000 26817000 30009000 58754000 18788 2172 17111 157414;157415;157416;157417;157418;157419;157420;157421;157422;157423;157424;157425;157426;157427;157428;157429 125355;125356;125357;125358;125359;125360;125361;125362;125363;125364;125365;125366;125367;125368;125369;125370;125371;125372 125362 18 GGQQLAASER Unmodified 1015.5047 0.50467125 462 O75147 OBSL1 Obscurin-like protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 12.073 12.199 2 0.019804 11306 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 47.603 15.132 21197000 0 0 0 1233200 1434300 2023400 2060300 1361000 1493900 2208400 1723100 2850700 2415800 2392400 0 18789 462 17112 157430;157431;157432;157433;157434;157435;157436;157437;157438;157439;157440 125373 125373 1 GGQQVDRGPQPALK Unmodified 1449.7688 0.76882486 3512 Q8TE77 SSH3 Protein phosphatase Slingshot homolog 3 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 28.012 24.31 3 0.025282 32024 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 37.013 26.403 31493000 0 23116000 8377300 0 0 0 0 0 0 0 0 0 0 0 0 18790 3512 17113 157441;157442 125374 125374 1 GGQTASFALK Unmodified 978.51345 0.51344502 124 O00178 GTPBP1 GTP-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 40.261 40.431 2 0.039979 45628 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 40.058 9 79516000 0 0 0 5176800 3782100 6867800 6319400 4579200 4007200 9437600 7042200 10364000 9929400 0 12010000 18791 124 17114 157443;157444;157445;157446;157447;157448;157449;157450;157451;157452;157453 125375;125376;125377;125378 125378 4 GGQTHLGLPVFNTVK Unmodified 1566.8518 0.85182621 1716 P53597 SUCLG1 Succinyl-CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 84.1 75.97 3 0.014964 99163 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 35.757 28.212 29081000 29081000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18792 1716 17115 157454 125379 125379 1 GGQTREHAMLAK Oxidation (M) 1313.651 0.65101791 1014 P15170;Q8IYD1 GSPT1;GSPT2 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A;Eukaryotic peptide chain release factor GTP-binding subunit ERF3B yes no 0 1 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 7.7388 4.7454 3 0.0022286 8027 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.46 58.323 1488800000 1442600000 20183000 26034000 0 0 0 0 0 0 0 0 0 0 0 0 18793 1014 17116 157455;157456;157457 125380;125381;125382 125380 1405 3 GGQTREHAMLAK Unmodified 1297.6561 0.65610329 1014 P15170;Q8IYD1 GSPT1;GSPT2 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A;Eukaryotic peptide chain release factor GTP-binding subunit ERF3B yes no 0 0 1 By MS/MS By matching 2 0 2 1 1 14.054 10.889 3 0.00045999 16255 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.122 76.754 1582600000 1576800000 0 5759500 0 0 0 0 0 0 0 0 0 0 0 0 18794 1014 17116 157458;157459 125383 125383 1 GGQVSLTVHGTQQVHSPPEQSPVQANSSSSK Unmodified 3157.5388 0.53883151 1142 P22670 RFX1 MHC class II regulatory factor RFX1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 54.31 48.276 4 1.0081E-11 65572 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.479 46.764 49124000 43965000 0 5159200 0 0 0 0 0 0 0 0 0 0 0 0 18795 1142 17117 157460;157461 125384;125385 125384 2 GGQVYATNTR Unmodified 1065.5203 0.52032131 593 O94855 SEC24D Protein transport protein Sec24D yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 13.85 13.96 2 0.022591 13354 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 46.001 23.51 19867000 0 0 0 1412900 1782600 2160800 0 1649900 1538400 3891300 3713700 0 0 3717600 0 18796 593 17118 157462;157463;157464;157465;157466;157467;157468;157469 125386;125387 125386 2 GGQYENFR Unmodified 969.43044 0.43044367 3167 Q86VM9 ZC3H18 Zinc finger CCCH domain-containing protein 18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 25.679 25.884 2 0.022664 27245 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 60.972 25.866 54756000 0 0 0 0 0 22052000 0 0 12602000 0 20102000 0 0 0 0 18797 3167 17119 157470;157471;157472 125388;125389;125390 125390 3 GGQYYNTK Unmodified 929.4243 0.42429566 3686 Q92917 GPKOW G patch domain and KOW motifs-containing protein yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 12.555 8.9185 2 0.01048 12022 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 133.81 115.96 83301000 9308100 73993000 0 0 0 0 0 0 0 0 0 0 0 0 0 18798 3686 17120 157473;157474 125391 125391 1 GGREDMDISK Unmodified 1106.5026 0.50262234 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 17.688 14.22 2 0.0070407 18633 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.36 58.2 86039000 7498000 72155000 6386300 0 0 0 0 0 0 0 0 0 0 0 0 18799 1564 17121 157475;157476;157477 125392;125393 125392 2 GGRGDVGSADIQDLEK Unmodified 1615.7802 0.7801774 5240 Q9Y5M8 SRPRB Signal recognition particle receptor subunit beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.512 45.629 3 1.3904E-06 51255 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 64.454 59.081 182510000 0 0 0 11753000 14510000 13151000 12530000 18868000 12761000 21114000 25841000 0 16539000 17612000 17834000 18800 5240 17122 157478;157479;157480;157481;157482;157483;157484;157485;157486;157487;157488;157489 125394;125395;125396;125397;125398;125399;125400;125401;125402;125403;125404;125405 125395 12 GGRPGGFPDHPHR Unmodified 1385.6701 0.67011387 172 O00625 PIR Pirin yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 14.993 15.487 3 0.0022661 14299 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.14 14.914 25033000 0 0 0 0 0 0 0 0 0 0 3424500 0 0 0 21608000 18801 172 17123 157490;157491 125406 125406 1 GGRPNEIEPPPPEMPPWQK Oxidation (M) 2171.047 0.046973553 2693;3407 Q52LJ0;Q8NCA5 FAM98B;FAM98A Protein FAM98B;Protein FAM98A no no 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 62.657 62.692 3 3.6188E-06 71299 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 68.187 58.904 38283000 0 0 0 3922600 0 6756000 5185700 0 5363300 8114700 4952500 0 3988200 0 0 18802 2693;3407 17124 157492;157493;157494;157495;157496;157497;157498 125407;125408;125409;125410;125411;125412;125413;125414 125409 4347 8 GGRSPDEVTLTSIVPTR Unmodified 1783.9428 0.94282606 4974 Q9UKS6 PACSIN3 Protein kinase C and casein kinase substrate in neurons protein 3 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 72.376 72.539 3 0.00047328 82910 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.437 45.649 73153000 0 0 0 0 0 9434300 6822300 0 5637400 8973500 12717000 0 6318800 6641900 16607000 18803 4974 17125 157499;157500;157501;157502;157503;157504;157505;157506 125415;125416;125417;125418;125419 125416 4 GGRVVIFQQEQENK Unmodified 1630.8427 0.84271808 1941 P63151 PPP2R2A Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform yes yes 0 0 1 By MS/MS 2 0 2 2 51.044 43.082 2;3 2.5799E-69 59588 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 220.23 168.96 134600000 134600000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18804 1941 17126 157507;157508 125420;125421 125421 1 GGSDDSSKDPIDVNYEK Unmodified 1824.8014 0.80136636 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 40.708 40.886 2;3 8.5913E-10 44467 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.636 81.11 562010000 0 0 0 32115000 26924000 30481000 52385000 41084000 18881000 54697000 62359000 66519000 53045000 48389000 75128000 18805 894 17127 157509;157510;157511;157512;157513;157514;157515;157516;157517;157518;157519;157520;157521;157522;157523;157524;157525;157526;157527;157528;157529;157530;157531;157532 125422;125423;125424;125425;125426;125427;125428;125429;125430;125431;125432;125433;125434;125435;125436;125437 125425 15 GGSEVEGGRTALDNK Unmodified 1488.7168 0.71684887 3094 Q7Z460 CLASP1 CLIP-associating protein 1 yes yes 0 0 1 By MS/MS By matching By matching By MS/MS 10 0 4 1 1 1 1 18.809 19.076 2 0.027909 18931 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 59.426 33.867 5755700 0 0 0 0 0 0 0 1447900 733460 1452500 0 2121900 0 0 0 18806 3094 17128 157533;157534;157535;157536 125438 125438 1 GGSFENNWNIYK Unmodified 1427.647 0.64697839 1063 P17858 PFKL ATP-dependent 6-phosphofructokinase, liver type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 69.488 69.624 2 0.00089821 79938 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 72.928 38.236 269700000 0 0 0 0 16817000 27798000 17656000 21452000 17429000 35240000 32872000 35882000 0 0 64556000 18807 1063 17129 157537;157538;157539;157540;157541;157542;157543;157544;157545 125439;125440;125441;125442;125443;125444;125445;125446 125439 8 GGSFQLNELQGLK Unmodified 1389.7252 0.72522871 764 P02788 LTF Lactotransferrin;Lactoferricin-H;Kaliocin-1;Lactoferroxin-A;Lactoferroxin-B;Lactoferroxin-C yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 77.85 77.977 2 6.6934E-33 90113 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 169.76 141.36 55181000 0 0 0 0 0 0 0 0 0 40962000 4530700 0 9689000 0 0 18808 764 17130 157546;157547;157548 125447;125448;125449 125447 2 GGSGGGGEGIQDRESSFR Unmodified 1751.7823 0.78230267 372 O43823 AKAP8 A-kinase anchor protein 8 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.721 29.912 3 2.024E-11 31226 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.468 69.291 117400000 0 0 0 6361600 6208600 7338600 7333100 8143900 6000200 10652000 8914600 12610000 15144000 12110000 16582000 18809 372 17131 157549;157550;157551;157552;157553;157554;157555;157556;157557;157558;157559;157560 125450;125451;125452;125453;125454;125455;125456;125457;125458;125459;125460;125461 125452 12 GGSGGGGGGSSGGRGSGGGSSGGSIGGR Unmodified 2078.9074 0.90739662 780 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 2 1 1 1 2 1 1 2 1 1 1 6.5791 6.6706 3 0 4468 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 260.14 257.24 + 8845200000 0 0 0 696780000 438260000 447160000 376670000 3542400000 468220000 588570000 0 662680000 907850000 425150000 291450000 18810 780 17132 157561;157562;157563;157564;157565;157566;157567;157568;157569;157570;157571;157572;157573;157574 125462;125463;125464;125465;125466;125467;125468;125469;125470;125471;125472;125473 125462 11 GGSGGGGGGSSGGRGSGGGSSGGSIGGRGSSSGGVK Unmodified 2738.2312 0.23124995 780 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 7.3468 7.4839 4 1.8437E-109 6127 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 112.75 107.29 + 163610000 0 0 0 3169500 2139600 3921200 0 11785000 2546400 5909000 21871000 88741000 11243000 7324000 4956600 18811 780 17133 157575;157576;157577;157578;157579;157580;157581;157582;157583;157584;157585 125474;125475;125476;125477;125478;125479;125480;125481 125480 8 GGSGGGGSISGGGYGSGGGSGGR Unmodified 1740.7412 0.74116614 79 CON__P35908v2;P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 68 5 5 5 4 15 3 7 5 5 8 3 3 21.454 21.641 2;3 0 19010 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 250.19 241.24 + 3535000000 0 0 0 340740000 300760000 312420000 122960000 479590000 123300000 254140000 321040000 361820000 556030000 177270000 184940000 18812 79 17134 157586;157587;157588;157589;157590;157591;157592;157593;157594;157595;157596;157597;157598;157599;157600;157601;157602;157603;157604;157605;157606;157607;157608;157609;157610;157611;157612;157613;157614;157615;157616;157617;157618;157619;157620;157621;157622;157623;157624;157625;157626;157627;157628;157629;157630;157631;157632;157633;157634;157635;157636;157637;157638;157639;157640;157641;157642;157643;157644;157645;157646;157647;157648;157649;157650;157651;157652;157653 125482;125483;125484;125485;125486;125487;125488;125489;125490;125491;125492;125493;125494;125495;125496;125497;125498;125499;125500;125501;125502;125503;125504;125505;125506;125507;125508;125509;125510;125511;125512;125513;125514;125515;125516;125517;125518;125519;125520;125521;125522;125523;125524;125525;125526;125527;125528;125529;125530;125531;125532;125533;125534;125535;125536;125537;125538;125539;125540;125541;125542;125543;125544;125545;125546;125547;125548;125549;125550;125551;125552 125528 64 GGSGGGGSISGGGYGSGGGSGGRYGSGGGSK Unmodified 2434.0494 0.049369407 79 CON__P35908v2;P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 22.126 22.387 3 2.1155E-126 22865 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 137.25 133.59 + 77444000 0 0 0 4742000 0 8683800 0 0 0 4286400 6711200 44019000 4569300 4432800 0 18813 79 17135 157654;157655;157656;157657;157658;157659;157660 125553;125554;125555;125556 125555 4 GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK Unmodified 3222.2743 0.27429656 1354 P35527;CON__P35527 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 182 23 13 12 14 29 14 18 10 15 14 11 9 42.46 42.571 3;4 0 36817 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 221.86 221.86 + 10742000000 0 0 0 416900000 319950000 764540000 351790000 2939500000 508560000 1048500000 1013900000 1202200000 1058600000 496150000 621400000 18814 1354 17136 157661;157662;157663;157664;157665;157666;157667;157668;157669;157670;157671;157672;157673;157674;157675;157676;157677;157678;157679;157680;157681;157682;157683;157684;157685;157686;157687;157688;157689;157690;157691;157692;157693;157694;157695;157696;157697;157698;157699;157700;157701;157702;157703;157704;157705;157706;157707;157708;157709;157710;157711;157712;157713;157714;157715;157716;157717;157718;157719;157720;157721;157722;157723;157724;157725;157726;157727;157728;157729;157730;157731;157732;157733;157734;157735;157736;157737;157738;157739;157740;157741;157742;157743;157744;157745;157746;157747;157748;157749;157750;157751;157752;157753;157754;157755;157756;157757;157758;157759;157760;157761;157762;157763;157764;157765;157766;157767;157768;157769;157770;157771;157772;157773;157774;157775;157776;157777;157778;157779;157780;157781;157782;157783;157784;157785;157786;157787;157788;157789;157790;157791;157792;157793;157794;157795;157796;157797;157798;157799;157800;157801;157802;157803;157804;157805;157806;157807;157808;157809;157810;157811;157812;157813;157814;157815;157816;157817;157818;157819;157820;157821;157822;157823;157824;157825;157826;157827;157828;157829;157830;157831;157832;157833;157834;157835;157836;157837;157838;157839;157840;157841;157842 125557;125558;125559;125560;125561;125562;125563;125564;125565;125566;125567;125568;125569;125570;125571;125572;125573;125574;125575;125576;125577;125578;125579;125580;125581;125582;125583;125584;125585;125586;125587;125588;125589;125590;125591;125592;125593;125594;125595;125596;125597;125598;125599;125600;125601;125602;125603;125604;125605;125606;125607;125608;125609;125610;125611;125612;125613;125614;125615;125616;125617;125618;125619;125620;125621;125622;125623;125624;125625;125626;125627;125628;125629;125630;125631;125632;125633;125634;125635;125636;125637;125638;125639;125640;125641;125642;125643;125644;125645;125646;125647;125648;125649;125650;125651;125652;125653;125654;125655;125656;125657;125658;125659;125660;125661;125662;125663;125664;125665;125666;125667;125668;125669;125670;125671;125672;125673;125674;125675;125676;125677;125678;125679;125680;125681;125682;125683;125684;125685;125686;125687;125688;125689;125690;125691;125692;125693;125694;125695;125696;125697;125698;125699;125700;125701;125702;125703;125704;125705;125706;125707;125708;125709;125710;125711;125712;125713;125714;125715;125716;125717;125718;125719;125720 125558 157 GGSGGSYGGGGSGGGYGGGSGSR Unmodified 1790.7204 0.72043069 1354 P35527;CON__P35527 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 63 6 4 4 3 17 3 4 4 5 6 4 3 16.886 17.053 2;3 0 13804 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 285.18 100.66 + 27065000000 0 0 0 2030000000 1276100000 1761900000 722610000 6592700000 953040000 2731800000 2498900000 3040400000 2669300000 1552100000 1235800000 18815 1354 17137 157843;157844;157845;157846;157847;157848;157849;157850;157851;157852;157853;157854;157855;157856;157857;157858;157859;157860;157861;157862;157863;157864;157865;157866;157867;157868;157869;157870;157871;157872;157873;157874;157875;157876;157877;157878;157879;157880;157881;157882;157883;157884;157885;157886;157887;157888;157889;157890;157891;157892;157893;157894;157895;157896;157897;157898;157899;157900;157901;157902;157903;157904;157905 125721;125722;125723;125724;125725;125726;125727;125728;125729;125730;125731;125732;125733;125734;125735;125736;125737;125738;125739;125740;125741;125742;125743;125744;125745;125746;125747;125748;125749;125750;125751;125752;125753;125754;125755;125756;125757;125758;125759;125760;125761;125762;125763;125764;125765;125766;125767 125725 40 GGSGGSYGRGSRGGSGGSYGGGGSGGGYGGGSGSR Unmodified 2869.2108 0.21084886 1354 P35527;CON__P35527 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 2 By MS/MS 10 0 1 1 15.045 15.516 4 1.2645E-58 14854 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 89.793 80.558 + 16075000 0 0 0 0 0 0 0 0 0 0 0 16075000 0 0 0 18816 1354 17138 157906 125768 125768 1 GGSGLEQGFGCFGFGFWAGR Unmodified 2092.9214 0.92137911 5303 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 7.056 7.1797 3 0.0011193 4821 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 40.349 36.961 + 9216100000 0 0 0 843050000 428850000 624460000 314110000 2294000000 373070000 910080000 959600000 716410000 997760000 397130000 357630000 18817 5303 17139 157907;157908;157909;157910;157911;157912;157913;157914;157915;157916;157917;157918;157919;157920;157921;157922;157923;157924;157925;157926;157927;157928;157929;157930 125769;125770;125771;125772;125773;125774;125775;125776;125777;125778;125779;125780;125781 125773 12 GGSGSGPTIEEVD Unmodified 1203.5255 0.52552585 908 P0DMV9;P0DMV8 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.31 2.4 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 47.525 48.091 2 0.00064269 48457 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 90.629 79.764 3462700000 1644800000 0 0 97225000 74036000 98094000 95987000 79368000 84847000 109120000 218980000 215070000 110350000 189470000 445360000 18818 908 17140 157931;157932;157933;157934;157935;157936;157937;157938;157939;157940;157941;157942;157943 125782;125783;125784;125785;125786;125787;125788;125789;125790;125791;125792;125793;125794 125791 8 GGSGSVLQDEEVLASLER Unmodified 1844.9116 0.91158551 4758 Q9NZ09 UBAP1 Ubiquitin-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 85.16 85.26 2 4.6468E-20 98572 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 124.45 92.439 62024000 0 0 0 0 4749600 3889700 0 4141900 3585400 7333200 8024900 6315400 5101400 4229700 14653000 18819 4758 17141 157944;157945;157946;157947;157948;157949;157950;157951;157952;157953 125795;125796;125797;125798;125799;125800;125801;125802;125803;125804;125805 125797 11 GGSISGGGYGSGGGK Unmodified 1196.5422 0.54217896 79 CON__P35908v2;P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.63 1 2 1 10 2 2 1 1 1 1 1 1 1 1 1 1 21.103 20.818 2 6.2967E-10 92799 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 107.85 82.288 + 8185200000 60498000 233920000 0 1403600000 651910000 1916600 0 0 456820000 870640000 922150000 1138200000 1402600000 605840000 437110000 18820 79 17142 157954;157955;157956;157957;157958;157959;157960;157961;157962;157963;157964;157965;157966;157967 125806;125807;125808;125809;125810;125811;125812;125813;125814;125815;125816;125817;125818 125811 12 GGSISVQVNSIK Unmodified 1187.651 0.65100113 2458 Q14978 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 51.541 51.419 2 0.00047839 57761 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 79.16 51.278 40075000 0 0 0 3519600 5731300 11692000 5785700 0 0 0 13347000 0 0 0 0 18821 2458 17143 157968;157969;157970;157971;157972;157973;157974 125819;125820;125821;125822 125821 4 GGSLLAGGGGFGGGSLSGGGGSR Unmodified 1820.8765 0.87653741 76 CON__P19012;P19012 KRT15 Keratin, type I cytoskeletal 15 yes no 0 0 0 By MS/MS 10 0 1 1 70.293 69.666 2 0.00016564 80813 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 41.378 24.436 + 2167900 0 0 0 2167900 0 0 0 0 0 0 0 0 0 0 0 18822 76 17144 157975 125823 125823 1 GGSNGGSNVGMEDGERPR Unmodified 1774.7653 0.7652724 1546 P48634 PRRC2A Protein PRRC2A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 18.286 18.496 3 0.00030418 19130 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 54.805 51.725 38566000 0 0 0 2656800 4457800 2413000 0 3513400 3171100 3550600 3975800 4479200 2503000 2968800 4876500 18823 1546 17145 157976;157977;157978;157979;157980;157981;157982;157983;157984;157985;157986 125824;125825;125826;125827;125828;125829;125830;125831 125824 8 GGSPGEGVLGPPPPPR Unmodified 1469.7627 0.76267685 2941 Q6P9B9 INTS5 Integrator complex subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 55.377 55.503 2 0.0025572 62994 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 69.346 53.774 52209000 0 0 0 3864500 2873400 4432900 3054100 4120900 0 5035700 5463200 6635900 4396800 5548900 6782200 18824 2941 17146 157987;157988;157989;157990;157991;157992;157993;157994;157995;157996;157997 125832;125833;125834;125835;125836;125837 125834 5 GGSRGEEVGELSR Unmodified 1331.643 0.64295564 888 P09543 CNP 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 1 2 2 2 1 2 2 2 20.584 20.771 2;3 0.005562 21101 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 61.212 48.585 586810000 0 0 0 38987000 30503000 44998000 41112000 44198000 30576000 48029000 87389000 54170000 54859000 45543000 66452000 18825 888 17147 157998;157999;158000;158001;158002;158003;158004;158005;158006;158007;158008;158009;158010;158011;158012;158013;158014;158015;158016;158017;158018;158019 125838;125839;125840;125841;125842;125843;125844;125845 125839 3 GGSSSGGGYGSGGGGSSSVK Unmodified 1587.6761 0.67610626 79 CON__P35908v2;P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 2 1 2 1 2 2 2 2 2 2 1 1 9.4431 9.5848 2;3 8.0384E-67 7940 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 199.38 193.14 + 2198300000 0 0 0 273360000 2751100 227110000 123450000 315090000 73122000 123990000 289610000 204110000 408500000 86821000 70359000 18826 79 17148 158020;158021;158022;158023;158024;158025;158026;158027;158028;158029;158030;158031;158032;158033;158034;158035;158036;158037;158038;158039 125846;125847;125848;125849;125850;125851;125852;125853;125854 125846 8 GGSTGGGGGFDPPPAYHEVVDAEK Unmodified 2300.0346 0.034554191 5061 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 65.732 65.701 3 0.0024574 74496 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 26.5 22.394 32055000 0 0 0 1865100 2638700 4747700 0 0 0 4188100 0 0 5360600 6005600 7249700 18827 5061 17149 158040;158041;158042;158043;158044;158045;158046 125855;125856 125856 2 GGSTTGSQFLEQFK Unmodified 1485.71 0.70997257 2380 Q14157 UBAP2L Ubiquitin-associated protein 2-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 74.188 73.619 2 2.6208E-05 85021 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 112.83 102.08 2500000000 0 441940000 0 118450000 107200000 0 142030000 143700000 190000000 208130000 231180000 245890000 219710000 147110000 304650000 18828 2380 17150 158047;158048;158049;158050;158051;158052;158053;158054;158055;158056;158057;158058;158059;158060;158061 125857;125858;125859;125860;125861;125862;125863;125864;125865;125866;125867;125868;125869;125870;125871;125872;125873 125870 17 GGSVYPDICTISLVAVSDVNK Unmodified 2193.0987 0.098734352 423 O60678 PRMT3 Protein arginine N-methyltransferase 3 yes yes 0 0 0 By MS/MS 2 0 1 1 96.129 91.308 2 2.2065E-08 113153 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.76 106.76 25382000 0 25382000 0 0 0 0 0 0 0 0 0 0 0 0 0 18829 423 17151 158062 125874;125875;125876 125875 3 GGSWIQEINVAEK Unmodified 1429.7201 0.72014333 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 78.295 77.638 2 4.6415E-13 89227 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 136.49 101.04 808770000 0 370250000 26975000 12372000 14779000 37987000 14630000 20175000 25334000 39905000 41428000 45448000 32280000 40167000 87038000 18830 1986 17152 158063;158064;158065;158066;158067;158068;158069;158070;158071;158072;158073;158074;158075;158076;158077 125877;125878;125879;125880;125881;125882;125883;125884;125885;125886;125887;125888;125889;125890;125891 125880 15 GGTCAVAAPFDTVHIPEATK Unmodified 2040.9939 0.99387535 3291 Q8IZ69 TRMT2A tRNA (uracil-5-)-methyltransferase homolog A yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 80.905 77.266 3 1.3558E-08 96207 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.794 65.757 211880000 0 208950000 2929600 0 0 0 0 0 0 0 0 0 0 0 0 18831 3291 17153 158078;158079 125892;125893 125892 2 GGTFQMGGSSSHNRPSGSNVDTLLR Oxidation (M) 2577.199 0.19901053 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 48.016 48.462 4 7.6452E-13 53266 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.781 61.08 36291000 0 0 0 0 0 0 0 8545000 0 0 8557200 0 0 0 19189000 18832 3119 17154 158080;158081;158082 125894;125895 125894 4730 2 GGTFQMGGSSSHNRPSGSNVDTLLR Unmodified 2561.2041 0.20409591 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 1 By MS/MS 10 0 1 1 58.527 59.12 3 5.0838E-10 66607 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.9 28.748 6945000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6945000 18833 3119 17154 158083 125896 125896 1 GGTGFAGSGVK Unmodified 936.46649 0.46649483 5133 Q9Y314 NOSIP Nitric oxide synthase-interacting protein yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.226 21.43 2 0.007227 22181 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 83.456 62.596 280260000 0 0 0 19497000 17476000 29729000 22928000 14834000 14556000 23844000 33710000 32170000 19426000 21616000 30478000 18834 5133 17155 158084;158085;158086;158087;158088;158089;158090;158091;158092;158093;158094;158095 125897;125898;125899;125900;125901;125902;125903;125904;125905 125898 2 GGTILAPTVSAK Unmodified 1113.6394 0.63937381 3041 Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.727 49.883 2 2.6436E-06 56532 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 112.75 43.325 892410000 0 0 0 45162000 57353000 56900000 80075000 65537000 60950000 72404000 103790000 73682000 71661000 80736000 124160000 18835 3041 17156 158096;158097;158098;158099;158100;158101;158102;158103;158104;158105;158106;158107 125906;125907;125908;125909;125910;125911;125912;125913;125914;125915;125916;125917;125918;125919;125920;125921;125922;125923;125924;125925;125926;125927 125920 22 GGTLFGGEVCK Unmodified 1123.5332 0.53319418 1446 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 51.684 50.393 2 0.0021907 57842 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 68.846 41.022 363220000 0 187040000 0 8676100 23667000 0 0 22378000 0 0 31437000 0 0 40462000 49562000 18836 1446 17157 158108;158109;158110;158111;158112;158113;158114;158115;158116 125928;125929;125930;125931;125932;125933;125934;125935 125935 7 GGTLLSVTGEVEPR Unmodified 1413.7464 0.74635808 1329;4333 P33240;Q9H0L4 CSTF2;CSTF2T Cleavage stimulation factor subunit 2;Cleavage stimulation factor subunit 2 tau variant no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 72.205 72.393 2 0.0014548 83150 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 58.274 29.547 89571000 0 0 0 0 0 7238000 0 0 6801800 12601000 11276000 12430000 6451900 10572000 22200000 18837 1329;4333 17158 158117;158118;158119;158120;158121;158122;158123;158124 125936;125937;125938;125939;125940 125940 5 GGTLTQYEGK Unmodified 1052.5138 0.51383895 2638 Q16851 UGP2 UTP--glucose-1-phosphate uridylyltransferase yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26.606 25.775 2 0.0009285 27645 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 112.84 66.416 578320000 27086000 402770000 2859800 0 4402500 13331000 8110100 8442900 6254600 12610000 22197000 23512000 0 13564000 33176000 18838 2638 17159 158125;158126;158127;158128;158129;158130;158131;158132;158133;158134;158135;158136;158137;158138 125941;125942;125943;125944;125945;125946;125947;125948;125949;125950;125951;125952;125953;125954 125948 13 GGTPSAFDR Unmodified 906.41954 0.41954463 2064;861;1063 P17858;P08237;Q01813 PFKL;PFKM;PFKP ATP-dependent 6-phosphofructokinase, liver type;ATP-dependent 6-phosphofructokinase, muscle type;ATP-dependent 6-phosphofructokinase, platelet type no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.386 23.59 2 0.0052558 24784 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 78.77 45.22 1839000000 0 0 0 78155000 92230000 85751000 102370000 131320000 61197000 190730000 199630000 311430000 216690000 168900000 200560000 18839 1063;861;2064 17160 158139;158140;158141;158142;158143;158144;158145;158146;158147;158148;158149;158150 125955;125956;125957;125958;125959;125960;125961;125962;125963 125962 7 GGTVADLDEQDEETVTAGGK Unmodified 1990.8967 0.89672331 3687 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 51.858 51.625 2 4.6313E-60 58277 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 127.76 121.91 10645000 0 0 0 0 5096900 0 5548000 0 0 0 0 0 0 0 0 18840 3687 17161 158151;158152;158153 125964;125965;125966 125964 3 GGTVADLDEQDEETVTAGGKEDEDPAK Unmodified 2775.2206 0.22063622 3687 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching 6.67 3.74 2 2 5 2 2 1 1 1 1 1 53.659 51.212 3 2.0672E-137 64749 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 158.2 154.47 101770000 12383000 50760000 0 0 0 0 0 0 0 6622600 9870500 7780500 6584100 0 7768600 18841 3687 17162 158154;158155;158156;158157;158158;158159;158160;158161;158162 125967;125968;125969;125970;125971;125972 125969 6 GGTVPADLEAAAASLPSSK Unmodified 1740.8894 0.8893935 5278 Q9Y6D9 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 80.181 80.24 2;3 6.736E-17 92751 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 113.72 98.824 653800000 0 0 0 16831000 23775000 32952000 47892000 45337000 31536000 72966000 80822000 68508000 52661000 68052000 112470000 18842 5278 17163 158163;158164;158165;158166;158167;158168;158169;158170;158171;158172;158173;158174;158175;158176;158177;158178;158179;158180;158181;158182;158183;158184;158185;158186 125973;125974;125975;125976;125977;125978;125979;125980;125981;125982;125983;125984;125985;125986;125987 125974 13 GGVAEACPNIRK Unmodified 1270.6452 0.64520425 2582 Q15813 TBCE Tubulin-specific chaperone E yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 28.571 24.229 3 0.045642 33853 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 36.847 27.201 213220000 138200000 35791000 39224000 0 0 0 0 0 0 0 0 0 0 0 0 18843 2582 17164 158187;158188;158189 125988 125988 0 GGVAGGSILK Unmodified 857.49707 0.49706667 1427 P41091;Q2VIR3 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein yes no 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 6 2 3 1 41.011 36.466 1;2 0.0059609 47180 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 111.74 27.495 1418700000 651840000 717940000 48940000 0 0 0 0 0 0 0 0 0 0 0 0 18844 1427 17165 158190;158191;158192;158193;158194;158195 125989;125990 125989 2 GGVDTAAAPAGGAPPAHAPGPGR Unmodified 1950.966 0.96602112 2423 Q14657 LAGE3 EKC/KEOPS complex subunit LAGE3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 38.463 38.772 3 0.00084748 42998 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 33.348 22.494 36507000 0 0 0 0 0 5923500 0 3597800 0 5686900 6409000 9727800 0 5161900 0 18845 2423 17166 158196;158197;158198;158199;158200;158201 125991;125992;125993;125994;125995;125996 125993 5 GGVDVTLPR Unmodified 912.50288 0.50288033 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 52.45 52.801 2 0.0071283 59721 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 73.248 21.461 364150000 0 0 0 0 0 36198000 0 0 23580000 27955000 53469000 82112000 57858000 0 82982000 18846 2172 17167 158202;158203;158204;158205;158206;158207;158208 125997;125998;125999;126000;126001;126002 126001 6 GGVDVTLPRVEGK Unmodified 1325.7303 0.73031409 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 58.939 58.277 3 0.00028337 72613 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 90.926 83.381 219820000 0 72207000 0 6981700 8496000 11120000 12420000 13853000 10650000 9809700 15094000 14966000 14261000 13910000 16052000 18847 2172 17168 158209;158210;158211;158212;158213;158214;158215;158216;158217;158218;158219;158220;158221;158222 126003;126004;126005;126006;126007;126008;126009;126010;126011;126012;126013;126014;126015;126016;126017;126018 126009 12 GGVEEGPTVLR Unmodified 1112.5826 0.58258722 794 P05089 ARG1 Arginase-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.561 42.737 2 0.0003315 48558 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 88.948 26.949 190400000 0 0 0 38374000 15233000 10235000 10969000 41137000 5973000 10059000 10893000 21241000 13057000 7187000 6044600 18848 794 17169 158223;158224;158225;158226;158227;158228;158229;158230;158231;158232;158233;158234 126019;126020;126021;126022;126023;126024;126025;126026;126027;126028;126029;126030;126031 126030 13 GGVEEGPTVLRK Unmodified 1240.6776 0.67755023 794 P05089 ARG1 Arginase-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 32.158 32.345 2;3 0.0023451 35279 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 63.727 56.065 1101100000 0 0 0 309440000 50984000 57022000 52001000 194550000 36948000 67555000 63231000 121490000 77051000 30858000 39921000 18849 794 17170 158235;158236;158237;158238;158239;158240;158241;158242;158243;158244;158245;158246;158247;158248;158249;158250;158251;158252;158253;158254;158255;158256;158257;158258 126032;126033;126034;126035 126033 0 GGVGAPGSPSTPPTR Unmodified 1336.6735 0.67352749 5002 Q9ULR3 PPM1H Protein phosphatase 1H yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.443 30.632 2 7.9061E-10 33072 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 94.465 74.136 104860000 0 0 0 5292500 6486000 6180900 6410800 6078800 7490200 9943100 12434000 13326000 9393900 7230400 14594000 18850 5002 17171 158259;158260;158261;158262;158263;158264;158265;158266;158267;158268;158269;158270 126036;126037;126038;126039;126040;126041;126042;126043;126044;126045;126046;126047 126044 12 GGVILVSHDER Unmodified 1180.62 0.62003536 4653 Q9NUQ8 ABCF3 ATP-binding cassette sub-family F member 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 2 2 2 2 2 1 2 2 1 1 32.934 33.074 2;3 0.010874 36793 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 85.731 64.283 467300000 0 0 0 31866000 33681000 38760000 43466000 42318000 30607000 56516000 37082000 66861000 43264000 12977000 29902000 18851 4653 17172 158271;158272;158273;158274;158275;158276;158277;158278;158279;158280;158281;158282;158283;158284;158285;158286;158287;158288;158289;158290;158291 126048;126049;126050;126051;126052;126053;126054;126055;126056 126056 6 GGVPAHMFGVTK Unmodified 1199.6121 0.61211321 705 O95905 ECD Protein SGT1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 55.769 51.779 2;3 0.013721 56783 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 33.227 17.84 38195000 14955000 0 7050200 0 0 0 0 0 0 16190000 0 0 0 0 0 18852 705 17173 158292;158293;158294 126057;126058;126059 126057 2 GGVQVPAVDISSSLGGR Unmodified 1597.8424 0.84238373 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.551 78.609 2 1.3812E-09 91095 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 87.618 54.24 366930000 0 0 0 12863000 22242000 21464000 26745000 31284000 25534000 36399000 35780000 46601000 29666000 34199000 44152000 18853 2172 17174 158295;158296;158297;158298;158299;158300;158301;158302;158303;158304;158305;158306 126060;126061;126062;126063;126064;126065;126066;126067;126068;126069;126070 126068 11 GGVSAVAGGVTAVGSAVVNK Unmodified 1698.9264 0.92644771 3546 Q8WUH6 TMEM263 Transmembrane protein 263 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 74.713 74.778 2;3 1.6658E-87 85181 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 170.56 149.33 3534200000 0 0 0 86268000 220950000 311880000 227870000 260190000 160290000 330830000 511660000 476020000 127250000 165240000 655750000 18854 3546 17175 158307;158308;158309;158310;158311;158312;158313;158314;158315;158316;158317;158318;158319;158320;158321;158322;158323;158324;158325;158326;158327;158328;158329;158330 126071;126072;126073;126074;126075;126076;126077;126078;126079;126080;126081;126082;126083;126084;126085;126086 126079 11 GGVTEISAADK Unmodified 1046.5244 0.52440364 4578 Q9NQW7 XPNPEP1 Xaa-Pro aminopeptidase 1 yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 29.499 26.556 2 0.020077 35362 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 59.067 30.893 115100000 0 115100000 0 0 0 0 0 0 0 0 0 0 0 0 0 18855 4578 17176 158331;158332;158333 126087;126088;126089;126090;126091 126089 5 GGVTGSPEASISGSK Unmodified 1332.6521 0.65212334 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.992 31.181 2 6.5266E-28 33793 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 138.75 103.21 363940000 0 0 0 16688000 21564000 27963000 28026000 30104000 23899000 24343000 23946000 42859000 45194000 24971000 54384000 18856 2172 17177 158334;158335;158336;158337;158338;158339;158340;158341;158342;158343;158344;158345 126092;126093;126094;126095;126096;126097;126098;126099;126100;126101;126102;126103;126104 126101 13 GGVVAGNVAHILDSNHGK Unmodified 1743.9016 0.90162994 2947 Q6PGP7 TTC37 Tetratricopeptide repeat protein 37 yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 59.661 59.978 3 0.012964 67339 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 20.446 16.225 10655000 0 0 0 0 0 0 0 0 2544300 0 0 0 2532300 0 5578700 18857 2947 17178 158346;158347;158348 126105 126105 1 GGVVNAAKEEHETDEK Unmodified 1711.8013 0.80130678 244 O15042 U2SURP U2 snRNP-associated SURP motif-containing protein yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 14.174 14.305 3 9.7976E-05 13044 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.08 60.446 50686000 0 0 0 3515600 5536400 1432100 3945900 3692200 1173300 5955800 0 7475700 6043100 4481900 7433700 18858 244 17179 158349;158350;158351;158352;158353;158354;158355;158356;158357;158358;158359 126106;126107;126108;126109;126110;126111;126112;126113 126108 7 GGVVTSNPLGF Unmodified 1046.5397 0.53965977 1591 P49748 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 1 2 2 2 2 1 2 82.422 82.476 1;2 2.1808E-05 95519 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 128.12 112.68 283440000 0 0 0 12505000 13503000 16082000 18556000 21382000 2792400 32818000 37520000 29905000 28301000 24782000 45298000 18859 1591 17180 158360;158361;158362;158363;158364;158365;158366;158367;158368;158369;158370;158371;158372;158373;158374;158375;158376;158377;158378;158379;158380;158381 126114;126115;126116;126117 126114 1 GGVYLHTSAK Unmodified 1031.54 0.53999412 4482 Q9HA65 TBC1D17 TBC1 domain family member 17 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 23.673 19.701 2 0.0085181 28008 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.149 53.517 78422000 70138000 0 8284200 0 0 0 0 0 0 0 0 0 0 0 0 18860 4482 17181 158382;158383 126118 126118 1 GGWDHGDTQSIQSSR Unmodified 1629.7132 0.71316047 4802 Q9P206 KIAA1522 Uncharacterized protein KIAA1522 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 29.005 28.968 3 0.0073477 31566 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 21.823 9.1969 18074000 0 0 0 0 8436300 0 0 0 0 0 0 0 0 9638200 0 18861 4802 17182 158384;158385 126119;126120 126120 2 GGWGISPR Unmodified 828.42424 0.42423608 1954;1906 P67775;P62714 PPP2CA;PPP2CB Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform;Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform no no 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 43.428 43.877 2 0.013935 48243 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 71.296 50.814 54044000 0 0 0 0 0 0 0 0 0 0 14038000 0 6288700 8887500 24829000 18862 1954;1906 17183 158386;158387;158388;158389 126121;126122 126122 2 GGYAGSSQAPNK Unmodified 1135.5258 0.52580062 2779 Q5T6F2 UBAP2 Ubiquitin-associated protein 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 9.5425 9.4155 2 1.7089E-07 7424 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 117.89 101.43 156110000 0 5053400 0 7234700 0 9837000 16061000 10166000 11537000 11905000 26075000 12988000 12892000 12221000 20136000 18863 2779 17184 158390;158391;158392;158393;158394;158395;158396;158397;158398;158399;158400;158401 126123;126124;126125;126126;126127;126128;126129;126130;126131 126125 8 GGYDGYRPSFSNTPNSGYTQSQFSAPR Unmodified 2940.3063 0.30631237 2407 Q14444 CAPRIN1 Caprin-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 69.215 69.354 3 9.327E-73 79603 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 117.82 115.54 123900000 0 0 0 0 5351300 13036000 5608800 8954700 9916700 13063000 14224000 15826000 6548500 7628700 23742000 18864 2407 17185 158402;158403;158404;158405;158406;158407;158408;158409;158410;158411;158412 126132;126133;126134;126135;126136;126137;126138;126139;126140;126141;126142;126143;126144 126143 13 GGYFDEFGIIR Unmodified 1272.6139 0.61388734 947 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase yes yes 0 0 0 By MS/MS 10 0 1 1 85.465 85.633 2 0.0032196 98826 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.827 68.245 21188000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21188000 18865 947 17186 158413 126145 126145 1 GGYFPENVK Unmodified 1009.4869 0.48689592 2228 Q13045 FLII Protein flightless-1 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 52.248 46.475 2 0.0045578 60548 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.89 102.17 229870000 0 229870000 0 0 0 0 0 0 0 0 0 0 0 0 0 18866 2228 17187 158414 126146 126146 1 GGYGAAAGGATRPPPPR Unmodified 1551.7906 0.79062293 4999 Q9ULL5 PRR12 Proline-rich protein 12 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 26.393 26.796 3 0.038823 28468 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 24.784 14.996 23661000 0 0 0 0 0 0 0 0 4922900 0 6334100 0 0 6053600 6350800 18867 4999 17188 158415;158416;158417;158418 126147 126147 1 GGYHLVK Unmodified 772.42317 0.42317345 3987 Q96SB4 SRPK1 SRSF protein kinase 1 yes yes 0 0 0 By MS/MS 2 0 1 1 21.586 18.784 2 0.034105 23852 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 85.306 42.533 8827900 0 0 8827900 0 0 0 0 0 0 0 0 0 0 0 0 18868 3987 17189 158419 126148 126148 1 GGYIGSTYFER Unmodified 1248.5775 0.57750184 1831 P61081 UBE2M NEDD8-conjugating enzyme Ubc12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 62.602 62.69 2 0.0027475 70797 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.465 61.314 298870000 0 0 0 15171000 13509000 31446000 28651000 19852000 10313000 35655000 38079000 31220000 0 23459000 51513000 18869 1831 17190 158420;158421;158422;158423;158424;158425;158426;158427;158428;158429;158430 126149;126150;126151;126152;126153;126154;126155 126151 6 GGYTSGTFR Unmodified 944.43519 0.4351947 1183 P25205 MCM3 DNA replication licensing factor MCM3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 26.227 26.362 2 0.022744 28408 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.346 29.215 54004000 0 0 0 3488100 3520700 7473700 4249600 2730700 3750400 0 10206000 0 0 6688900 11895000 18870 1183 17191 158431;158432;158433;158434;158435;158436;158437;158438;158439 126156;126157;126158;126159;126160 126156 5 GHAAFTSDPKPTIEVSGK Unmodified 1840.9319 0.93192702 724 P00390 GSR Glutathione reductase, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 43.457 44.041 3 0.00016956 48018 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.635 54.306 75313000 0 0 0 0 0 0 0 0 0 0 0 26280000 0 12396000 36637000 18871 724 17192 158440;158441;158442 126161;126162;126163 126161 3 GHAGNPRDPTDEGIFISK Unmodified 1909.9282 0.92823863 2381 Q14160 SCRIB Protein scribble homolog yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 1 2 2 1 2 2 2 2 1 1 2 47.194 47.421 3;4 0.00014106 52704 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 59.9 55.802 175650000 0 0 0 4416200 2193300 17961000 16432000 6589000 12099000 20299000 23303000 25782000 8610500 8316500 29644000 18872 2381 17193 158443;158444;158445;158446;158447;158448;158449;158450;158451;158452;158453;158454;158455;158456;158457;158458;158459;158460;158461 126164;126165;126166;126167;126168;126169;126170;126171 126170 7 GHASPLPPSAAPTTDSTDSITGQNSR Unmodified 2564.2103 0.21028672 3877 Q96II8 LRCH3 Leucine-rich repeat and calponin homology domain-containing protein 3 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 53.361 53.135 3 0.00011429 60068 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 18.776 15.853 4966900 0 0 0 0 2504400 0 2462400 0 0 0 0 0 0 0 0 18873 3877 17194 158462;158463 126172;126173 126172 2 GHAVGDIPGVR Unmodified 1076.5727 0.57269123 1884 P62266 RPS23 40S ribosomal protein S23 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 36.34 36.413 2 0.00042561 40072 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 85.731 72.734 224880000 0 0 0 0 29272000 0 38686000 0 32437000 0 0 0 78309000 46175000 0 18874 1884 17195 158464;158465;158466;158467;158468 126174;126175;126176;126177;126178 126177 1 GHAVGDIPGVRFK Unmodified 1351.7361 0.73606817 1884 P62266 RPS23 40S ribosomal protein S23 yes yes 0 0 1 By MS/MS 2 0 1 1 63.13 54.862 3 0.040861 74383 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.915 30.051 28979000 28979000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18875 1884 17196 158469 126179 126179 0 GHAVNLLDVPVPVAR Unmodified 1555.8835 0.88346068 154 O00429 DNM1L Dynamin-1-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 1 2 2 2 2 2 2 2 2 2 2 2 80.929 81.009 2;3 8.7347E-06 93603 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 100.55 91.595 511160000 0 0 0 10762000 15406000 68111000 22522000 34729000 32137000 59466000 40454000 57017000 30068000 35387000 105100000 18876 154 17197 158470;158471;158472;158473;158474;158475;158476;158477;158478;158479;158480;158481;158482;158483;158484;158485;158486;158487;158488;158489;158490;158491;158492 126180;126181;126182;126183;126184;126185;126186;126187;126188;126189;126190;126191;126192;126193;126194;126195;126196;126197;126198;126199 126192 7 GHAVNLLDVPVPVARK Unmodified 1683.9784 0.9784237 154 O00429 DNM1L Dynamin-1-like protein yes yes 0 0 1 By MS/MS 10 0 1 1 74.091 74.43 3 0.0025847 85289 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.14 30.165 8082700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8082700 18877 154 17198 158493 126200 126200 1 GHAYSVTGAEEVESNGSLQK Unmodified 2061.9603 0.96032661 1057 P17655 CAPN2 Calpain-2 catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 47.138 45.485 3 2.072E-99 55943 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 170.16 159.92 321770000 17352000 191200000 32040000 0 0 6798200 0 5619800 4920800 9584300 12508000 12120000 0 7301300 22324000 18878 1057 17199 158494;158495;158496;158497;158498;158499;158500;158501;158502;158503;158504;158505;158506 126201;126202;126203;126204;126205;126206;126207;126208;126209;126210;126211;126212 126205 12 GHAYSVTGAK Unmodified 989.49304 0.49304393 841 P07384 CAPN1 Calpain-1 catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.18 3.29 3 1 13 1 2 1 1 1 1 1 1 1 1 1 1 2 1 1 11.608 10.946 2 0.0015063 9732 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 90.64 74.496 2515500000 1423700000 421480000 397250000 23384000 16334000 17893000 33831000 23774000 16672000 27024000 24892000 17820000 31148000 27963000 12314000 18879 841 17200 158507;158508;158509;158510;158511;158512;158513;158514;158515;158516;158517;158518;158519;158520;158521;158522;158523 126213;126214;126215;126216;126217;126218;126219;126220;126221;126222;126223;126224;126225;126226;126227;126228 126227 14 GHDDSFLK Unmodified 917.4243 0.42429566 36 A8K2U0 A2ML1 Alpha-2-macroglobulin-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 22.869 22.9 2 0.0099045 24213 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 81.381 71.075 21663000 0 0 0 13376000 1696000 2099300 1637400 0 0 0 0 0 0 0 2854700 18880 36 17201 158524;158525;158526;158527;158528 126229 126229 1 GHDEREHPFLVK Unmodified 1462.7317 0.73171107 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 28.804 29.093 3 0.010673 28831 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.809 31.863 70073000 0 0 0 0 0 11819000 0 0 7632100 0 0 0 11471000 0 39151000 18881 1986 17202 158529;158530;158531;158532 126230;126231 126230 2 GHDLNEDGLVSWEEYK Unmodified 1889.8432 0.84317159 376 O43852 CALU Calumenin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 4.43 3.54 4 1 2 2 2 1 1 1 77.398 73.611 2;3 1.7467E-32 94365 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 173.54 165.68 386870000 132840000 198530000 23508000 0 0 0 0 0 0 0 0 5816100 0 0 26179000 18882 376 17203 158533;158534;158535;158536;158537;158538;158539 126232;126233;126234;126235;126236;126237;126238 126237 7 GHEAAQEWSQGEAGK Unmodified 1583.6964 0.69644778 4415 Q9H6E5 TUT1 Speckle targeted PIP5K1A-regulated poly(A) polymerase yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 20.841 21.259 3 0.0016343 21067 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 32.815 27.638 6740300 0 0 0 0 0 0 0 0 0 0 3135500 0 0 3604800 0 18883 4415 17204 158540;158541;158542 126239;126240 126240 2 GHEAVESLQAK Unmodified 1167.5884 0.58840088 2867 Q6BDS2 UHRF1BP1 UHRF1-binding protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 21.726 18.923 2 3.9701E-10 24101 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 150.35 119.79 3302800 0 0 3302800 0 0 0 0 0 0 0 0 0 0 0 0 18884 2867 17205 158543 126241 126241 1 GHEDDSYEARK Unmodified 1305.5586 0.55855731 4371 Q9H2P0 ADNP Activity-dependent neuroprotector homeobox protein yes yes 0 0 1 By MS/MS 2 0 1 1 6.2161 3.9986 3 1.8534E-07 5742 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 101.3 93.408 22699000 0 0 22699000 0 0 0 0 0 0 0 0 0 0 0 0 18885 4371 17206 158544 126242 126242 1 GHEDLRQDER Unmodified 1253.5749 0.57487608 1454 P42345 MTOR Serine/threonine-protein kinase mTOR yes yes 0 0 1 By MS/MS By matching By matching By matching By MS/MS By matching By matching 10 0 7 1 1 1 1 1 1 1 6.4982 6.5994 3 0.034491 4889 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 42.001 20.37 43644000 0 0 0 1051900 1248200 1793600 0 0 0 0 22748000 4301500 0 9033000 3468000 18886 1454 17207 158545;158546;158547;158548;158549;158550;158551 126243 126243 1 GHEENGDVVTEPQVAEK Unmodified 1836.849 0.84898525 4879 Q9UG63 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.17 4 3 24 1 5 1 2 2 2 2 2 2 2 2 2 2 2 2 34.808 33.861 2;3 3.5611E-63 43307 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 165.33 152.77 1337800000 11279000 250070000 1796800 83712000 62124000 92087000 74471000 72233000 59386000 80549000 131540000 109930000 121860000 85339000 101480000 18887 4879 17208 158552;158553;158554;158555;158556;158557;158558;158559;158560;158561;158562;158563;158564;158565;158566;158567;158568;158569;158570;158571;158572;158573;158574;158575;158576;158577;158578;158579;158580;158581;158582 126244;126245;126246;126247;126248;126249;126250;126251;126252;126253;126254;126255;126256;126257;126258;126259;126260;126261;126262;126263;126264;126265;126266;126267 126250 24 GHEFYNPQK Unmodified 1118.5145 0.51450765 1981 P78406 RAE1 mRNA export factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22.757 22.065 2 1.5315E-28 21521 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 181.81 172.29 454710000 77088000 19302000 34050000 14585000 15510000 23066000 19750000 19233000 22223000 23479000 39503000 42777000 28491000 27182000 48469000 18888 1981 17209 158583;158584;158585;158586;158587;158588;158589;158590;158591;158592;158593;158594;158595;158596;158597 126268;126269;126270;126271;126272;126273;126274;126275;126276;126277;126278;126279;126280;126281;126282;126283;126284 126277 16 GHETSALLILEK Unmodified 1309.7242 0.72416608 251 O15084 ANKRD28 Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 75.855 70.314 3 0.00084847 86209 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 68.44 42.967 30438000 21338000 0 9099700 0 0 0 0 0 0 0 0 0 0 0 0 18889 251 17210 158598;158599 126285;126286;126287 126286 3 GHEVTLVSR Unmodified 996.53524 0.53524309 4603 Q9NRG7 SDR39U1 Epimerase family protein SDR39U1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 23.016 23.239 2 0.0069711 23771 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 73.665 57.371 26717000 0 0 0 0 3279300 2595700 0 3160000 0 0 5353300 8391100 3937300 0 0 18890 4603 17211 158600;158601;158602;158603;158604;158605;158606 126288;126289;126290 126289 3 GHEYTNIK Unmodified 960.46649 0.46649483 2122 Q06124 PTPN11 Tyrosine-protein phosphatase non-receptor type 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 14.705 11.46 2 0.00094179 16719 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 164.53 121.41 187390000 41518000 67953000 77923000 0 0 0 0 0 0 0 0 0 0 0 0 18891 2122 17212 158607;158608;158609 126291;126292 126291 1 GHFECPPYNSSTIR Unmodified 1663.7413 0.74128948 4954 Q9UK59 DBR1 Lariat debranching enzyme yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 44.414 44.831 3 0.00090532 49634 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 82.202 77.488 27194000 0 0 0 0 0 0 0 0 0 7590500 0 0 7284900 0 12319000 18892 4954 17213 158610;158611;158612;158613;158614 126293;126294;126295;126296 126296 4 GHFFVEDQIYCEK Unmodified 1670.7399 0.73989249 119 O00151 PDLIM1 PDZ and LIM domain protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 3.5 2.93 4 1 1 3 2 1 72.32 67.879 2;3 0.0011524 89249 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.951 48.567 189090000 157130000 0 16686000 0 0 0 0 0 0 0 0 0 0 0 15281000 18893 119 17214 158615;158616;158617;158618;158619;158620 126297;126298;126299;126300;126301;126302 126300 6 GHFGPIHCVR Unmodified 1178.5767 0.57673075 5167 Q9Y3F4 STRAP Serine-threonine kinase receptor-associated protein yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 2 1 2 1 1 29.203 29.492 3 0.0017088 30978 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 63.216 50.64 232630000 0 0 0 6518000 0 8074800 4974700 0 8020700 0 37337000 48115000 26262000 25156000 68176000 18894 5167 17215 158621;158622;158623;158624;158625;158626;158627;158628;158629;158630;158631 126303;126304;126305 126305 3 GHFGPINSVAFHPDGK Unmodified 1678.8216 0.82158871 2273 Q13347 EIF3I Eukaryotic translation initiation factor 3 subunit I yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.24 3.19 2 2 13 3 1 1 2 2 1 1 1 1 1 1 1 1 63.143 61.717 3;4 1.7721E-31 68965 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 112.24 107.48 260620000 59825000 4734200 0 3621000 0 11558000 5832300 7800500 8084000 10295000 14324000 27378000 12574000 21095000 73495000 18895 2273 17216 158632;158633;158634;158635;158636;158637;158638;158639;158640;158641;158642;158643;158644;158645;158646;158647;158648 126306;126307;126308;126309;126310;126311;126312;126313;126314;126315;126316;126317;126318;126319 126319 13 GHFSETNQHDSK Unmodified 1385.596 0.59600545 2649 Q2KHR3 QSER1 Glutamine and serine-rich protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 5.2 3.92 3 2 2 1 1 1 6.2542 4.1844 2;3 2.5082E-27 6382 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 201.56 184.91 104970000 84663000 10070000 0 6994000 3244500 0 0 0 0 0 0 0 0 0 0 18896 2649 17217 158649;158650;158651;158652;158653 126320;126321;126322 126321 3 GHGECVEYVK Unmodified 1176.5234 0.52335778 280 O15379 HDAC3 Histone deacetylase 3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 18.588 18.897 3 0.036219 18123 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 27.772 19.551 10034000 0 0 0 0 882700 0 0 0 0 0 0 3101100 2241600 2241700 1566800 18897 280 17218 158654;158655;158656;158657;158658 126323 126323 1 GHGFITPADGGPDIFLHISDVEGEYVPVEGDEVTYK Unmodified 3858.8265 0.82646548 5120 Q9Y2V2 CARHSP1 Calcium-regulated heat stable protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2.67 0.471 1 2 2 1 96.309 91.338 4 4.127E-25 114569 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.914 56.224 29490000 25837000 3652400 0 0 0 0 0 0 0 0 0 0 0 0 0 18898 5120 17219 158659;158660;158661 126324;126325;126326 126326 3 GHGGLSCGLETSGHESNSTQSR Unmodified 2256.9778 0.97778437 95 CON__Q5D862;Q5D862 FLG2 Filaggrin-2 yes no 0 0 0 By MS/MS 10 0 1 1 23.175 23.005 4 0.000826 24469 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 35.036 26.849 + 9288900 0 0 0 9288900 0 0 0 0 0 0 0 0 0 0 0 18899 95 17220 158662 126327;126328 126328 2 GHGQPGADAEK Unmodified 1065.4839 0.4839358 942 P11274 BCR Breakpoint cluster region protein yes yes 0 0 0 By MS/MS 3 0 1 1 5.5609 2.1996 2 0.026157 3596 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 62.463 8.3059 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18900 942 17221 158663 126329 126329 1 GHGTYMGEEK Unmodified 1107.4655 0.46550855 2349 Q13868 EXOSC2 Exosome complex component RRP4 yes yes 0 0 0 By MS/MS 10 0 1 1 8.1986 8.5409 2 0.020711 6137 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.082 20.12 1366600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1366600 18901 2349 17222 158664 126330 126330 1 GHGVLEMPSGTGK Unmodified 1268.6183 0.6183208 1069 P18074 ERCC2 TFIIH basal transcription factor complex helicase XPD subunit yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 1 2 45.43 40.345 2;3 0.00063672 50837 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 59.155 44.011 31867000 23897000 0 7970000 0 0 0 0 0 0 0 0 0 0 0 0 18902 1069 17223 158665;158666;158667 126331;126332;126333 126332 3 GHHPLNPQVPPARQP Unmodified 1643.8645 0.86445658 904 P0CW18 PRSS56 Serine protease 56 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 33.528 33.662 3 0.0018625 36558 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 38.189 32.294 89962000 0 0 0 2539900 8588400 7051000 5546900 5173700 6201200 10622000 13020000 0 7967000 8166600 15086000 18903 904 17224 158668;158669;158670;158671;158672;158673;158674;158675;158676;158677;158678 126334;126335;126336;126337;126338;126339;126340;126341;126342;126343;126344;126345;126346;126347 126344 10 GHIAVSAAVFPTGTK Unmodified 1454.7882 0.78816332 4578 Q9NQW7 XPNPEP1 Xaa-Pro aminopeptidase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 2 2 1 66.535 63.214 3 2.6873E-12 85365 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 108.97 95.007 55470000 49533000 3655600 2281400 0 0 0 0 0 0 0 0 0 0 0 0 18904 4578 17225 158679;158680;158681;158682;158683 126348;126349;126350 126349 1 GHIISDGGCSCPGDVAK Unmodified 1728.756 0.75595326 4828 Q9P2T1 GMPR2 GMP reductase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 3 1 36.52 31.671 2;3 7.4634E-05 41910 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.01 71.561 169170000 6147400 117990000 45036000 0 0 0 0 0 0 0 0 0 0 0 0 18905 4828 17226 158684;158685;158686;158687;158688 126351;126352;126353;126354;126355;126356 126351 5 GHIIVDEFQNTNVK Unmodified 1612.8209 0.82092001 724 P00390 GSR Glutathione reductase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 5.23 3.79 6 2 5 4 2 2 1 1 1 1 1 63.057 59.509 2;3 1.0448E-29 81004 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 143.97 124.21 1090700000 656660000 181390000 222950000 0 0 0 3720700 0 0 4119900 13116000 0 0 8726800 0 18906 724 17227 158689;158690;158691;158692;158693;158694;158695;158696;158697;158698;158699;158700;158701 126357;126358;126359;126360;126361;126362;126363;126364;126365;126366;126367;126368;126369;126370 126364 13 GHLAFLSGQ Unmodified 928.47667 0.47666558 677 O95639 CPSF4 Cleavage and polyadenylation specificity factor subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 60.999 60.047 2 0.0053315 82021 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.43 99.489 105250000 34591000 0 10941000 4302000 5105700 3840400 4070300 0 5256400 5764900 7389400 0 6556000 6257400 11172000 18907 677 17228 158702;158703;158704;158705;158706;158707;158708;158709;158710;158711;158712;158713 126371;126372;126373;126374;126375;126376;126377;126378 126374 7 GHLDALTADVK Unmodified 1138.5982 0.59823728 1797 P57740 NUP107 Nuclear pore complex protein Nup107 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4 3.46 3 1 1 2 1 50.068 45.542 2;3 0.00046543 59795 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.06 78.99 89539000 0 40268000 49271000 0 0 0 0 0 0 0 0 0 0 0 0 18908 1797 17229 158714;158715;158716;158717 126379;126380;126381;126382 126380 3 GHLENNPALEK Unmodified 1220.6149 0.61494998 808 P05388;Q8NHW5 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 20.288 20.489 2;3 2.9357E-127 21319 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 222.74 154.52 2116300000 0 0 0 134330000 106220000 148910000 129030000 103450000 80578000 200870000 237610000 208380000 300140000 260080000 206700000 18909 808 17230 158718;158719;158720;158721;158722;158723;158724;158725;158726;158727;158728;158729;158730;158731;158732;158733;158734;158735;158736;158737;158738;158739;158740;158741 126383;126384;126385;126386;126387;126388;126389;126390;126391;126392;126393;126394;126395;126396;126397;126398;126399;126400;126401;126402;126403;126404;126405;126406;126407;126408;126409;126410;126411;126412 126412 23 GHLSGLAK Unmodified 781.44464 0.44463717 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 12.352 12.548 2 0.044838 11570 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 48.756 9.9372 34562000 0 0 0 1353700 0 7274700 0 4548700 382300 2743700 8001100 4262300 0 0 5995700 18910 2501 17231 158742;158743;158744;158745;158746;158747;158748;158749 126413 126413 1 GHLSRPEAQSLSPYTTSANR Unmodified 2171.0719 0.07194275 583 O94776 MTA2 Metastasis-associated protein MTA2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 1 2 1 2 2 2 1 2 2 1 2 42.375 42.61 3;4 4.9229E-11 46279 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.554 67.565 626150000 0 0 0 15785000 15508000 64924000 30492000 36960000 42699000 56012000 48131000 76291000 71099000 40516000 127740000 18911 583 17232 158750;158751;158752;158753;158754;158755;158756;158757;158758;158759;158760;158761;158762;158763;158764;158765;158766;158767;158768 126414;126415;126416;126417;126418;126419;126420;126421;126422;126423;126424;126425;126426;126427;126428;126429;126430 126419 12 GHMNYEGPGMAR Unmodified 1318.5547 0.55467468 4393 Q9H4A3 WNK1 Serine/threonine-protein kinase WNK1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 29.206 29.558 3 0.0037907 30965 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 36.447 34.972 51547000 0 0 0 0 0 0 0 0 2680600 4656100 9864400 0 9661900 9859200 14825000 18912 4393 17233 158769;158770;158771;158772;158773;158774 126431;126432;126433;126434;126435;126436 126434 6 GHMNYEGPGMARK 2 Oxidation (M) 1478.6395 0.63946694 4393 Q9H4A3 WNK1 Serine/threonine-protein kinase WNK1 yes yes 0 2 1 By MS/MS 2 0 1 1 11.11 7.2366 3 0.0075856 11466 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.224 31.849 14625000 14625000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18913 4393 17234 158775 126437 126437 5856;5857 1 GHMNYEGPGMARK Unmodified 1446.6496 0.6496377 4393 Q9H4A3 WNK1 Serine/threonine-protein kinase WNK1 yes yes 0 0 1 By MS/MS 2 0 1 1 29.804 24.184 3 0.037556 34057 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 35.594 29.361 19913000 19913000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18914 4393 17234 158776 126438 126438 0 GHMNYEGPGMARK Oxidation (M) 1462.6446 0.64455232 4393 Q9H4A3 WNK1 Serine/threonine-protein kinase WNK1 yes yes 0 1 1 By MS/MS 2 0 1 1 20.213 15.489 3 0.007708 22550 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.357 36.644 7928800 7928800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18915 4393 17234 158777 126439 126439 5856;5857 0 GHNTLPSPWR Unmodified 1163.5836 0.58359027 1528 P47897 QARS Glutamine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 47.288 47.462 3 0.0059986 53327 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 57.785 47.476 69516000 0 0 0 3250600 0 6672000 4054600 4106300 3160600 8674100 11921000 0 7647000 5502900 14527000 18916 1528 17235 158778;158779;158780;158781;158782;158783;158784;158785;158786;158787 126440;126441;126442;126443;126444;126445;126446 126441 7 GHNTNVGAIVFHPK Unmodified 1489.779 0.77899561 303 O43172 PRPF4 U4/U6 small nuclear ribonucleoprotein Prp4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 45.439 45.619 3 0.00023595 50060 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 74.649 54.81 308310000 0 0 0 8653400 6626700 28579000 0 24375000 20977000 29938000 33310000 40666000 28658000 30219000 56305000 18917 303 17236 158788;158789;158790;158791;158792;158793;158794;158795;158796;158797;158798 126447;126448;126449;126450;126451;126452;126453;126454;126455;126456 126454 7 GHPEFSTNR Unmodified 1043.4785 0.4784565 1488 P45974 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 14.465 14.811 2 0.0057978 13389 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 76.774 68.554 52502000 0 0 0 0 0 0 0 0 0 0 0 0 0 17197000 35305000 18918 1488 17237 158799;158800 126457;126458 126458 2 GHPQDPLLSQFSAMAHK Oxidation (M) 1878.9047 0.90466641 1794 P57678 GEMIN4 Gem-associated protein 4 yes yes 0 1 0 By MS/MS 2 0 1 1 74.114 65.984 3 0.0028791 87253 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.532 30.74 12484000 12484000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18919 1794 17238 158801 126459 126459 2912 1 GHPVGGGGTDTTPVRPVK Unmodified 1730.9064 0.90638097 2857 Q68DC2 ANKS6 Ankyrin repeat and SAM domain-containing protein 6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.452 23.656 3 0.020075 24601 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 20.558 15.753 76051000 0 0 0 3369300 4591400 4790400 4104200 4678300 4246200 7322900 8489700 7526700 10500000 6961400 9470300 18920 2857 17239 158802;158803;158804;158805;158806;158807;158808;158809;158810;158811;158812;158813 126460;126461;126462;126463 126460 4 GHQCSLK Unmodified 828.39122 0.39122139 4769 Q9NZJ0 DTL Denticleless protein homolog yes yes 0 0 0 By MS/MS 2 0 1 1 0.62239 -2.6651 2 0.018996 410 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 114.78 70.172 12767000 12767000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18921 4769 17240 158814 126464;126465;126466 126464 3 GHQGITGDK Unmodified 911.44609 0.44609374 3617 Q92540 SMG7 Protein SMG7 yes yes 0 0 0 By MS/MS 2 0 1 1 5.6066 2.3662 2 0.0085907 4375 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.698 55.445 12513000 0 12513000 0 0 0 0 0 0 0 0 0 0 0 0 0 18922 3617 17241 158815 126467 126467 1 GHQMLVK Unmodified 811.43744 0.4374433 3249 Q8IWX8 CHERP Calcium homeostasis endoplasmic reticulum protein yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 12.381 12.605 2 0.027199 11788 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 77.72 25.911 5291500 0 0 0 0 0 0 0 0 0 0 0 0 2146200 3145300 0 18923 3249 17242 158816;158817 126468 126468 1 GHQNALPNPEK Unmodified 1203.5996 0.59963426 1026 P15822 HIVEP1 Zinc finger protein 40 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 23.19 19.269 2 0.0016939 27367 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 103.42 74.27 10414000 8751500 0 1662400 0 0 0 0 0 0 0 0 0 0 0 0 18924 1026 17243 158818;158819 126469 126469 0 GHQQLYWSHPR Unmodified 1407.6796 0.67961592 1886 P62273 RPS29 40S ribosomal protein S29 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 2 1 1 2 1 2 1 30.884 31.253 3 0.00035803 33816 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 69.276 61.897 119730000 0 0 0 0 0 16761000 0 0 4075100 0 9884600 35968000 16392000 15774000 20874000 18925 1886 17244 158820;158821;158822;158823;158824;158825;158826;158827;158828;158829 126470;126471;126472;126473;126474;126475;126476;126477;126478 126477 8 GHRIEEVPELPLVVEDK Unmodified 1958.0473 0.047291129 1377 P36578 RPL4 60S ribosomal protein L4 yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 2 2 2 2 83.381 78.414 3 2.0965E-05 100283 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.11 67.4 145460000 92891000 52567000 0 0 0 0 0 0 0 0 0 0 0 0 0 18926 1377 17245 158830;158831;158832;158833 126479;126480;126481;126482;126483;126484 126484 6 GHSDLGEVAPEIK Unmodified 1350.6779 0.67794416 3494 Q8TCY9 URGCP Up-regulator of cell proliferation yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 53.995 48.647 3 0.017593 63404 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 39.006 31.775 24218000 0 24218000 0 0 0 0 0 0 0 0 0 0 0 0 0 18927 3494 17246 158834;158835 126485 126485 1 GHSTCLSEGALSPDGTVLATASHDGYVK Unmodified 2829.3239 0.32393627 2927 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 78.301 73.092 4 7.0959E-47 89839 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 110.06 106.53 114810000 25578000 51046000 38189000 0 0 0 0 0 0 0 0 0 0 0 0 18928 2927 17247 158836;158837;158838 126486;126487;126488;126489 126489 4 GHSVEEALR Unmodified 996.49886 0.49885759 1802 P58107 EPPK1 Epiplakin yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By matching 10 0 6 1 1 1 1 1 1 20.685 20.74 2 0.0049392 21653 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 85.212 53.922 31482000 0 0 0 8556100 3354400 3835600 3861000 7812500 0 0 0 0 0 0 4062400 18929 1802 17248 158839;158840;158841;158842;158843;158844 126490;126491 126491 2 GHTADLLDLSWSK Unmodified 1441.7201 0.72014333 2734 Q5JSH3 WDR44 WD repeat-containing protein 44 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 84.531 79.399 2;3 8.3219E-05 101259 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.469 72.744 70896000 49584000 18320000 2991500 0 0 0 0 0 0 0 0 0 0 0 0 18930 2734 17249 158845;158846;158847;158848 126492;126493;126494;126495 126493 4 GHTAESSVSSSSSHR Unmodified 1514.671 0.67096131 2857 Q68DC2 ANKS6 Ankyrin repeat and SAM domain-containing protein 6 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 5.583 5.7004 3 2.084E-27 3589 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 106.66 104.59 117990000 0 0 0 6768000 7505100 6737200 13866000 10465000 7293000 8323700 10379000 13860000 9562800 8930400 14298000 18931 2857 17250 158849;158850;158851;158852;158853;158854;158855;158856;158857;158858;158859;158860 126496;126497;126498;126499;126500;126501;126502 126498 7 GHTDSVQDISFDHSGK Unmodified 1728.7703 0.770341 1471 P43034 PAFAH1B1 Platelet-activating factor acetylhydrolase IB subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.08 3.93 10 2 12 3 5 4 1 1 1 1 1 1 1 1 1 1 1 1 39.946 37.579 2;3;4 1.1149E-56 47704 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 204.48 198.04 1130600000 127890000 347630000 480840000 5468400 3168600 3721400 4110000 5245800 3472100 9045800 22158000 20964000 9379100 14305000 73222000 18932 1471 17251 158861;158862;158863;158864;158865;158866;158867;158868;158869;158870;158871;158872;158873;158874;158875;158876;158877;158878;158879;158880;158881;158882;158883;158884 126503;126504;126505;126506;126507;126508;126509;126510;126511;126512;126513;126514;126515;126516;126517;126518;126519;126520;126521 126513 16 GHTFAEELQK Unmodified 1158.5669 0.56693715 3828 Q96EY8 MMAB Cob(I)yrinic acid a,c-diamide adenosyltransferase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 40.756 35.664 3 0.0028645 44499 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 111.06 79.303 56225000 26385000 16070000 13770000 0 0 0 0 0 0 0 0 0 0 0 0 18933 3828 17252 158885;158886;158887 126522;126523 126523 1 GHTPLDLTCSTK Unmodified 1328.6395 0.63945017 2042 Q00653 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 2 40.091 40.331 2;3 0.01251 44837 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 28.791 3.4052 76949000 0 0 0 4427900 0 7659300 4724200 3670600 4734000 7013900 8199900 8828400 8098000 7736400 11857000 18934 2042 17253 158888;158889;158890;158891;158892;158893;158894;158895;158896;158897;158898;158899 126524;126525;126526;126527;126528 126527 5 GHTVTEPIQPLEPELPGEGQPEAR Unmodified 2580.282 0.2819951 286 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 yes yes 0 0 0 By MS/MS 10 0 1 1 75.486 75.641 3 0.0029384 87186 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 25.221 18.269 4465100 0 0 0 0 0 0 4465100 0 0 0 0 0 0 0 0 18935 286 17254 158900 126529 126529 1 GHVDILAPTVQELAALEK Unmodified 1903.0415 0.041477469 3608 Q92499 DDX1 ATP-dependent RNA helicase DDX1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 3.23 5 2 2 3 3 1 1 1 93.465 89.595 2;3 3.1413E-54 112821 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 146.3 129.08 605690000 86680000 508590000 3883000 0 0 0 0 0 0 1903200 0 0 0 0 4642900 18936 3608 17255 158901;158902;158903;158904;158905;158906;158907;158908;158909 126530;126531;126532;126533;126534;126535;126536;126537;126538;126539 126530 10 GHVEIPNLSDENSVDEVEISVSLAK Unmodified 2679.3239 0.3239195 661 O95433 AHSA1 Activator of 90 kDa heat shock protein ATPase homolog 1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 4 2 5 1 91.452 84.905 2;3 7.4769E-61 108297 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 120.85 118.08 438490000 434530000 3962600 0 0 0 0 0 0 0 0 0 0 0 0 0 18937 661 17256 158910;158911;158912;158913;158914;158915 126540;126541;126542;126543;126544 126544 4 GHVEPGEDDLETALR Unmodified 1636.7693 0.76927837 1632 P50583 NUDT2 Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical] yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 56.579 56.981 3 0.0002252 64056 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.54 37.489 11727000 0 0 0 0 0 0 0 0 0 0 0 0 0 2102200 9624900 18938 1632 17257 158916;158917 126545 126545 1 GHVEPGEDDLETALRETQEEAGIEAGQLTIIEGFK Unmodified 3780.833 0.83300742 1632 P50583 NUDT2 Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical] yes yes 0 0 1 By MS/MS By MS/MS 2.4 0.49 3 2 3 2 97.971 92.408 3;4 1.2922E-240 116280 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 200.15 193.65 289870000 262570000 27303000 0 0 0 0 0 0 0 0 0 0 0 0 0 18939 1632 17258 158918;158919;158920;158921;158922 126546;126547;126548 126547 3 GHVFEESQVAGTPMFVVK Unmodified 1960.9717 0.97168334 980 P13639 EEF2 Elongation factor 2 yes yes 0 0 0 By MS/MS 10 0 1 1 77.311 77.576 3 0.00017065 89119 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.164 53.725 22341000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22341000 18940 980 17259 158923 126549 126549 1 GHVFEESQVAGTPMFVVK Oxidation (M) 1976.9666 0.96659797 980 P13639 EEF2 Elongation factor 2 yes yes 0 1 0 By MS/MS 10 0 1 1 71.317 71.57 3 0.0013066 82383 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 45.083 36.286 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18941 980 17259 158924 126550 126550 1307 1 GHVHYLIK Unmodified 965.54469 0.54468557 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 0 0 By MS/MS 10 0 1 1 24.175 24.506 2 0.01941 24797 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 63.642 32.353 3512800 0 0 0 0 0 0 0 0 0 0 0 0 0 3512800 0 18942 2451 17260 158925 126551 126551 1 GHVIYEGK Unmodified 901.46577 0.46576654 5262;488 Q9Y618;O75376 NCOR2;NCOR1 Nuclear receptor corepressor 2;Nuclear receptor corepressor 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching 6.9 3.81 3 1 6 1 2 1 1 1 1 1 1 1 14.191 12.977 2 0.0064997 19257 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 130.04 115.26 340350000 164020000 15896000 91081000 6818900 0 0 0 0 0 15173000 10953000 0 16312000 9266700 10834000 18943 5262;488 17261 158926;158927;158928;158929;158930;158931;158932;158933;158934;158935 126552;126553;126554;126555;126556;126557;126558 126554 5 GHVLSYEGGMSVTQCSK Oxidation (M) 1854.824 0.82403283 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 1 0 By MS/MS 2 0 1 1 43.411 36.618 3 0.00025699 50117 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.165 46.693 22343000 22343000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18944 5262 17262 158936 126559 126559 6665 1 GHVQDPNDRR Unmodified 1192.5697 0.56973112 2465 Q14CX7 NAA25 N-alpha-acetyltransferase 25, NatB auxiliary subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 3 2 1 1 2 2 4.1288 4.2586 3 0.00061662 2250 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 87.298 82.541 79551000 0 0 0 0 0 0 15337000 48823000 12889000 515900 815130 1171600 0 0 0 18945 2465 17263 158937;158938;158939;158940;158941;158942;158943;158944;158945;158946;158947 126560;126561;126562;126563;126564;126565;126566;126567;126568;126569;126570;126571 126564 12 GHVQPIR Unmodified 805.45587 0.45587056 1918 P62854;Q5JNZ5 RPS26;RPS26P11 40S ribosomal protein S26;Putative 40S ribosomal protein S26-like 1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 2 1 1 1 1 1 1 2 2 2 7.6332 7.7951 2 0.019213 6320 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 110.54 60.416 111270000 0 0 0 0 7483600 5673000 0 8837100 4172100 12120000 22139000 16179000 10811000 6579700 17272000 18946 1918 17264 158948;158949;158950;158951;158952;158953;158954;158955;158956;158957;158958;158959;158960;158961 126572;126573;126574;126575;126576;126577;126578 126577 7 GHVSLAAELSK Unmodified 1110.6033 0.60332266 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 0 By MS/MS 2 0 2 2 53.646 45.583 2 0.00090672 61929 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.556 67.997 74560000 74560000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18947 1601 17265 158962;158963 126579;126580;126581 126580 3 GHVTQDAPIPGSPLYTIK Unmodified 1892.9996 0.99961265 2481 Q15029 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 1 2 2 2 1 2 2 2 2 2 2 72.147 72.267 2;3 2.953E-05 82470 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.759 74.621 396660000 0 0 0 12951000 20143000 32747000 23368000 22437000 16404000 36271000 38176000 46098000 32546000 39628000 75896000 18948 2481 17266 158964;158965;158966;158967;158968;158969;158970;158971;158972;158973;158974;158975;158976;158977;158978;158979;158980;158981;158982;158983;158984 126582;126583;126584;126585;126586;126587;126588;126589;126590;126591;126592;126593 126585 12 GHYESGSGQTSGFGQHESGSGQSSGYSK Unmodified 2789.155 0.15495669 104 CON__Q86YZ3;Q86YZ3 HRNR Hornerin yes no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 22.57 22.665 4 4.5893E-18 23599 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 59.372 57.028 + 44592000 0 0 0 0 1314900 3865000 2798100 14134000 0 6364900 0 0 10640000 5475100 0 18949 104 17267 158985;158986;158987;158988;158989;158990;158991 126594;126595 126594 2 GHYEVTGSDDETGK Unmodified 1493.627 0.62703081 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.6 1.74 1 19 1 1 1 2 2 2 2 1 2 2 2 2 15.114 15.144 2;3 4.9696E-08 14543 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 113.47 111.32 257300000 0 17717000 0 0 10664000 8304800 21070000 16073000 13248000 12858000 21737000 28179000 41099000 30479000 35870000 18950 2172 17268 158992;158993;158994;158995;158996;158997;158998;158999;159000;159001;159002;159003;159004;159005;159006;159007;159008;159009;159010;159011 126596;126597;126598;126599;126600;126601;126602;126603;126604;126605;126606;126607;126608;126609;126610;126611 126607 16 GHYNNVSCAVFHPR Unmodified 1656.7579 0.7579426 1721 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 40.885 41.194 3 4.4782E-08 45969 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 86.467 81.999 67599000 0 0 0 0 0 12035000 0 5518100 6805100 0 8609000 0 11369000 7612700 15651000 18951 1721 17269 159012;159013;159014;159015;159016;159017;159018 126612;126613;126614;126615;126616;126617 126617 5 GHYTEGAELVDAVLDVVRK Unmodified 2070.0746 0.074568512 4160 Q9BUF5 TUBB6 Tubulin beta-6 chain no no 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 97.927 93.264 3 2.2387E-87 116672 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 152.59 144.2 96734000 59610000 34074000 3049900 0 0 0 0 0 0 0 0 0 0 0 0 18952 4160 17270 159019;159020;159021;159022 126618;126619;126620;126621;126622 126621 5 GHYTEGAELVDSVLDVVR Unmodified 1957.9745 0.97452012 1963;842;2350;4182;2306 P07437;P68371;Q13509;Q13885;Q9BVA1 TUBB;TUBB4B;TUBB3;TUBB2A;TUBB2B Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-3 chain;Tubulin beta-2A chain;Tubulin beta-2B chain no no 0 0 0 By MS/MS 2 0 1 1 97.533 89.403 3 5.823E-09 115452 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 99.663 83.648 37420000 37420000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18953 842;1963;2306;2350;4182 17271 159023 126623 126623 1 GHYTEGAELVDSVLDVVRK Unmodified 2086.0695 0.069483134 1963;842;2350;4182;2306 P07437;P68371;Q13509;Q13885;Q9BVA1 TUBB;TUBB4B;TUBB3;TUBB2A;TUBB2B Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-3 chain;Tubulin beta-2A chain;Tubulin beta-2B chain no no 0 0 1 By MS/MS By MS/MS By MS/MS 2.19 0.7 6 17 13 21 11 4 97.588 94.161 2;3;4 1.3839E-180 113916 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 234.04 225.22 9172500000 6710100000 2374400000 87994000 0 0 0 0 0 0 0 0 0 0 0 0 18954 842;1963;2306;2350;4182 17272 159024;159025;159026;159027;159028;159029;159030;159031;159032;159033;159034;159035;159036;159037;159038;159039;159040;159041;159042;159043;159044;159045;159046;159047;159048;159049;159050;159051;159052;159053;159054;159055;159056;159057;159058;159059 126624;126625;126626;126627;126628;126629;126630;126631;126632;126633;126634;126635;126636;126637;126638;126639;126640;126641;126642;126643;126644;126645;126646;126647;126648;126649;126650;126651;126652;126653;126654;126655;126656;126657;126658;126659;126660;126661;126662;126663;126664;126665;126666;126667;126668 126657 37 GHYTIGK Unmodified 774.40244 0.40243801 1961;3031;4093;1962 P68363;Q71U36;P0DPH8;P0DPH7;Q6PEY2;Q9BQE3;P68366 TUBA1B;TUBA1A;TUBA3E;TUBA1C;TUBA4A Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 11.433 10.681 2 0.017052 9495 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 118.69 61.584 6004300000 3200100000 82111000 812780000 0 74404000 118270000 146740000 84047000 103350000 176630000 253540000 324520000 136200000 119660000 371950000 18955 1961;3031;4093;1962 17273 159060;159061;159062;159063;159064;159065;159066;159067;159068;159069;159070;159071;159072;159073;159074 126669;126670;126671;126672;126673;126674;126675;126676;126677;126678;126679;126680;126681;126682;126683;126684;126685;126686;126687;126688;126689;126690;126691 126670 20 GIAADGANALLPANR Unmodified 1422.7579 0.75792582 4425 Q9H6T3 RPAP3 RNA polymerase II-associated protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.815 65.901 2 0.0011047 74514 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 80.706 60.565 92099000 0 0 0 3739800 4129700 6877000 7025200 5140200 5587000 9034700 10763000 11671000 6157500 7654000 14320000 18956 4425 17274 159075;159076;159077;159078;159079;159080;159081;159082;159083;159084;159085;159086 126692;126693;126694;126695;126696;126697;126698;126699;126700;126701;126702;126703 126699 12 GIADVPEWFK Unmodified 1160.5866 0.58660996 3159 Q86V21 AACS Acetoacetyl-CoA synthetase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 86.815 84.44 2 0.002754 97273 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.438 55.544 87133000 0 79568000 2715600 0 0 0 0 0 0 0 0 0 0 0 4849600 18957 3159 17275 159087;159088;159089 126704;126705 126705 2 GIAFPTSISVNNCVCHFSPLK Unmodified 2347.1453 0.14530739 5067 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 90.65 84.148 3 3.0985E-09 109079 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.644 53.981 59802000 9169100 50633000 0 0 0 0 0 0 0 0 0 0 0 0 0 18958 5067 17276 159090;159091 126706 126706 0 GIALWGGEK Unmodified 929.49707 0.49706667 1776 P55884 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.823 62.919 2 0.006387 71264 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 75.213 50.319 165100000 0 0 0 10160000 8028100 9066300 8458800 9092500 6683900 12624000 25901000 16457000 16320000 13224000 29086000 18959 1776 17277 159092;159093;159094;159095;159096;159097;159098;159099;159100;159101;159102;159103 126707;126708;126709;126710;126711;126712;126713;126714;126715;126716;126717;126718;126719 126717 13 GIAPGDER Unmodified 813.39808 0.39808091 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 13.708 13.889 2 0.039356 12784 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 50.703 23.839 229710000 0 0 0 16869000 0 30374000 0 22831000 425290 0 0 44760000 0 48698000 65749000 18960 1986 17278 159104;159105;159106;159107;159108;159109;159110 126720;126721;126722 126722 3 GIAPGDERQCLPSLDLSCK Unmodified 2115.0089 0.0088734869 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 77.554 72.767 3 2.3782E-13 91577 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.511 67.238 222950000 17939000 168040000 36971000 0 0 0 0 0 0 0 0 0 0 0 0 18961 1986 17279 159111;159112;159113;159114 126723;126724;126725;126726;126727;126728 126723 6 GIAPIWISGENIPQEK Unmodified 1750.9254 0.92538508 2601 Q16342 PDCD2 Programmed cell death protein 2 yes yes 0 0 0 By MS/MS 10 0 1 1 83.834 84.024 2 0.0046814 97012 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.198 36.32 5982100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5982100 18962 2601 17280 159115 126729 126729 1 GIAQMLEK Oxidation (M) 904.4688 0.46880301 1956 P67870 CSNK2B Casein kinase II subunit beta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 33.67 33.901 2 0.0045459 37304 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 91.626 43.453 99329000 0 0 0 0 7080700 6077100 8981700 10822000 5379400 9153000 13473000 14822000 9645500 0 13896000 18963 1956 17281 159116;159117;159118;159119;159120;159121;159122;159123;159124;159125 126730;126731;126732;126733 126731 3141 4 GIARASGGTSEFITGK Unmodified 1550.8053 0.80526994 166 O00534 VWA5A von Willebrand factor A domain-containing protein 5A yes yes 0 0 1 By MS/MS 2 0 1 1 52.356 44.341 3 0.00034003 61114 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.158 46.144 18117000 18117000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18964 166 17282 159126 126734 126734 1 GIASTSDPPTANIK Unmodified 1370.7042 0.70415892 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 42.026 42.016 2 9.5007E-11 45940 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 104.82 85.509 59308000 0 0 0 3930300 5689900 13997000 0 0 10131000 8465400 0 0 9282900 7811100 0 18965 965 17283 159127;159128;159129;159130;159131;159132;159133;159134;159135;159136;159137 126735;126736;126737;126738;126739;126740;126741;126742;126743;126744 126738 10 GIASTSDPPTANIKPTPVVSTPSK Unmodified 2364.2537 0.25365509 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.14 61.241 3 1.4593E-82 69423 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 124.81 121.42 1125000000 0 0 0 55761000 57065000 65008000 89874000 75150000 56182000 105390000 108850000 133920000 72172000 112100000 193530000 18966 965 17284 159138;159139;159140;159141;159142;159143;159144;159145;159146;159147;159148;159149 126745;126746;126747;126748;126749;126750;126751;126752;126753;126754;126755;126756;126757 126749 13 GIAYIEFK Unmodified 939.50657 0.50656873 1085 P19338 NCL Nucleolin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 71.952 71.261 2 0.0068946 81461 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 91.906 65.042 818560000 0 103110000 198100000 23541000 24343000 32841000 38321000 30956000 32367000 37967000 46662000 59231000 56810000 43489000 90816000 18967 1085 17285 159150;159151;159152;159153;159154;159155;159156;159157;159158;159159;159160;159161;159162;159163;159164 126758;126759;126760;126761;126762;126763;126764;126765;126766;126767;126768;126769;126770;126771;126772;126773;126774;126775 126766 18 GICEMELLDGK Oxidation (M) 1279.5788 0.57882375 2476 Q15021 NCAPD2 Condensin complex subunit 1 yes yes 0 1 0 By matching By MS/MS 10 0 2 1 1 57.808 57.521 2 0.0032154 65283 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 60.398 48.55 7617100 0 0 0 1574700 0 0 6042500 0 0 0 0 0 0 0 0 18968 2476 17286 159165;159166 126776 126776 4082 1 GICEYHEK Unmodified 1034.4491 0.4491302 5131 Q9Y2Z0 SUGT1 Suppressor of G2 allele of SKP1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 14.751 11.43 2 0.01206 16655 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.32 49.15 222890000 18158000 133930000 70801000 0 0 0 0 0 0 0 0 0 0 0 0 18969 5131 17287 159167;159168;159169;159170 126777;126778;126779;126780;126781 126780 5 GICQSEENGSFLSK Unmodified 1554.6984 0.69842161 3488 Q8TCE6;Q6NSW5 FAM45A;FAM45B Protein FAM45A;Protein FAM45B yes no 0 0 0 By MS/MS 2.5 0.5 1 1 2 53.824 48.477 2 0.00082432 62734 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.752 88.539 33047000 0 33047000 0 0 0 0 0 0 0 0 0 0 0 0 0 18970 3488 17288 159171;159172 126782 126782 1 GICTEDGGNGIK Unmodified 1219.5503 0.55030081 1159 P23458 JAK1 Tyrosine-protein kinase JAK1 yes yes 0 0 0 By MS/MS 2 0 1 1 27.201 22.941 2 0.0094836 30249 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.173 61.546 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18971 1159 17289 159173 126783 126783 1 GIDASDYQTVQIFYPSK Unmodified 1930.9313 0.93125832 1533 P48147 PREP Prolyl endopeptidase yes yes 0 0 0 By MS/MS 2 0 1 1 86.238 78.108 2 0.00017428 101850 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.38 88.748 10731000 10731000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18972 1533 17290 159174 126784;126785 126785 2 GIDEDDLLEDK Unmodified 1260.5721 0.57214169 508 O75486 SUPT3H Transcription initiation protein SPT3 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 60.281 60.004 2 0.011235 68960 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 57.598 46.447 8790400 0 0 0 2437500 1818600 0 0 0 0 0 4534400 0 0 0 0 18973 508 17291 159175;159176;159177 126786 126786 1 GIDEGPEGLK Unmodified 1013.5029 0.50293991 3318 Q8N335 GPD1L Glycerol-3-phosphate dehydrogenase 1-like protein yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 38.938 34.549 2 0.0029552 44687 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.136 57.633 161220000 0 159570000 1647500 0 0 0 0 0 0 0 0 0 0 0 0 18974 3318 17292 159178;159179;159180 126787;126788 126787 1 GIDFKEDGNILGHK Unmodified 1541.7838 0.78380622 110 CON__Q9U6Y5 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.56 3.47 1 2 6 2 1 1 1 1 1 1 1 61.739 59.888 3 0.0025183 74819 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 62.042 50.428 + 69026000 23324000 7072900 0 0 0 5700600 5804400 2086600 6582300 0 7276000 0 0 0 11179000 18975 110 17293 159181;159182;159183;159184;159185;159186;159187;159188;159189 126789;126790;126791;126792 126791 3 GIDFKEDGNILGHKLEYNYNSHNVYIMADK Unmodified 3496.6722 0.67215387 110 CON__Q9U6Y5 yes yes 0 0 2 By MS/MS 2 0 1 1 87.706 82.864 5 2.7036E-10 102950 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 47.159 44.943 + 40831000 0 40831000 0 0 0 0 0 0 0 0 0 0 0 0 0 18976 110 17294 159190 126793 126793 1 GIDGVSVTSFSAR Unmodified 1294.6517 0.65172941 4306 Q9GZT8 NIF3L1 NIF3-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 68.356 68.491 2 0.0073777 77908 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.764 33.698 47032000 0 0 0 6747400 0 0 0 0 0 0 13140000 15125000 0 0 12020000 18977 4306 17295 159191;159192;159193;159194 126794 126794 1 GIDIQDVSMVVNYDMAK 2 Oxidation (M) 1928.886 0.88596438 4168 Q9BUQ8 DDX23 Probable ATP-dependent RNA helicase DDX23 yes yes 0 2 0 By MS/MS 10 0 1 1 82.622 82.769 2 0.00022747 96030 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.452 42.025 4235000 0 0 0 0 0 0 0 0 0 0 0 4235000 0 0 0 18978 4168 17296 159195 126795 126795 5658;5659 1 GIDNRTQQVVAIK Unmodified 1440.8049 0.80487601 4811 Q9P289 STK26 Serine/threonine-protein kinase 26 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.29 0.452 5 2 2 3 2 47.134 41.625 2;3 0.007857 52038 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 53.967 39.709 497800000 289770000 40061000 167970000 0 0 0 0 0 0 0 0 0 0 0 0 18979 4811 17297 159196;159197;159198;159199;159200;159201;159202 126796;126797;126798;126799;126800;126801 126800 5 GIDPFSLDALSK Unmodified 1261.6554 0.65541781 1410 P40227 CCT6A T-complex protein 1 subunit zeta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.63 3.92 13 2 12 5 7 3 1 1 1 1 1 1 1 1 1 1 1 1 87.455 85.356 2;3 1.6459E-07 108532 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.16 7.5034 10755000000 315810000 7833900000 273160000 55716000 99913000 205230000 127490000 166000000 144020000 252670000 241630000 261650000 153550000 188480000 436130000 18980 1410 17298 159203;159204;159205;159206;159207;159208;159209;159210;159211;159212;159213;159214;159215;159216;159217;159218;159219;159220;159221;159222;159223;159224;159225;159226;159227;159228;159229 126802;126803;126804;126805;126806;126807;126808;126809;126810;126811;126812;126813;126814;126815;126816;126817;126818;126819;126820;126821;126822;126823;126824;126825;126826;126827 126806 25 GIDRYNPENLATLER Unmodified 1759.8853 0.88531118 4851 Q9UBQ5 EIF3K Eukaryotic translation initiation factor 3 subunit K yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 1 1 2 69.145 69.254 2;3 0.00014395 79400 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 88.768 83.664 347470000 0 0 0 5059200 9843800 30165000 13679000 25660000 17041000 32014000 31705000 34250000 24829000 31305000 91922000 18981 4851 17299 159230;159231;159232;159233;159234;159235;159236;159237;159238;159239;159240;159241;159242 126828;126829;126830;126831;126832;126833;126834;126835;126836;126837;126838;126839;126840;126841 126840 8 GIDSDDVQDNSQLK Unmodified 1532.6954 0.69544472 3958 Q96QE3 ATAD5 ATPase family AAA domain-containing protein 5 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching 10 0 4 1 1 1 1 36.112 36.431 2 1.3557E-08 40379 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 97.456 76.586 13681000 0 0 0 0 0 2825500 3887000 0 0 0 2305300 4663400 0 0 0 18982 3958 17300 159243;159244;159245;159246 126842;126843 126842 2 GIDSSYRPSQK Unmodified 1236.6099 0.6098646 3775 Q96CB8 INTS12 Integrator complex subunit 12 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 20.296 20.357 3 0.0094946 21218 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 45.879 36.522 53454000 0 0 0 4432200 5416300 7887600 5406500 0 5927200 8050100 0 0 6963100 9371200 0 18983 3775 17301 159247;159248;159249;159250;159251;159252;159253;159254 126844;126845;126846;126847 126844 3 GIDYDFPSLILQK Unmodified 1507.7922 0.79224564 4250 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 91.269 91.387 2 0.010462 106089 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 43.282 31.416 2163700 0 0 0 0 0 0 0 0 0 2163700 0 0 0 0 0 18984 4250 17302 159255;159256 126848;126849 126848 2 GIEDDLMDLIK Oxidation (M) 1276.6221 0.62206877 4107 Q9BRF8 CPPED1 Serine/threonine-protein phosphatase CPPED1 yes yes 0 1 0 By MS/MS By MS/MS 2.5 0.5 2 2 2 2 91.294 86.345 2 0.0059403 108797 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.349 55.968 53455000 15344000 38111000 0 0 0 0 0 0 0 0 0 0 0 0 0 18985 4107 17303 159257;159258;159259;159260 126850;126851 126851 5603 2 GIEDDLMDLIK Unmodified 1260.6272 0.62715415 4107 Q9BRF8 CPPED1 Serine/threonine-protein phosphatase CPPED1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 97.429 93.403 2 0.0049237 112167 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 89.247 76.457 54006000 0 54006000 0 0 0 0 0 0 0 0 0 0 0 0 0 18986 4107 17303 159261;159262 126852 126852 1 GIEDIIVSK Unmodified 972.54916 0.54916182 4268 Q9BZJ0 CRNKL1 Crooked neck-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 66.183 66.234 2 0.019674 75940 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 53.775 20.259 35626000 0 0 0 2030000 2079800 0 2812800 2951100 2892200 5172800 4334100 5124500 3942700 4286100 0 18987 4268 17304 159263;159264;159265;159266;159267;159268;159269;159270;159271;159272 126853;126854;126855;126856 126853 4 GIEDNPMVVPLCNR Oxidation (M) 1628.7651 0.76506139 1210 P26640 VARS Valine--tRNA ligase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 63.32 63.523 2 0.001174 72720 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 55.064 42.448 39876000 0 0 0 0 0 6059000 6639100 0 0 7271900 0 0 0 9240900 10665000 18988 1210 17305 159273;159274;159275;159276;159277 126857;126858;126859;126860 126857 1774 4 GIEEEEILPGFILCDPNNLCHSGRTFDAQIVIIEHK Unmodified 4163.0456 0.045599929 1014 P15170 GSPT1 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A yes yes 0 0 1 By MS/MS 2 0 2 2 97.883 89.753 5 3.1526E-94 115765 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 118.3 113.05 91434000 91434000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18989 1014 17306 159278;159279 126861;126862 126861 1 GIEENVLR Unmodified 928.49779 0.49779495 4515 Q9HCH0 NCKAP5L Nck-associated protein 5-like yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 43.979 44.293 2 0.043141 48358 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.358 17.404 22868000 0 0 0 0 0 6228300 0 0 6662100 0 0 0 0 0 9977800 18990 4515 17307 159280;159281;159282 126863 126863 1 GIEGHSPGNLPK Unmodified 1204.62 0.62003536 3861 Q96GY0 ZC2HC1A Zinc finger C2HC domain-containing protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 6.92 3.89 5 8 2 1 2 1 1 1 1 1 1 1 1 31.036 29.26 2;3 0.0073542 31811 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 35.645 17.837 150600000 26615000 26579000 34308000 6649300 7504300 6482000 5558800 0 8475200 0 7699900 0 13168000 0 7561600 18991 3861 17308 159283;159284;159285;159286;159287;159288;159289;159290;159291;159292;159293;159294;159295 126864;126865;126866;126867;126868 126867 4 GIEGTVPYVTTDYNFK Unmodified 1802.8727 0.87268081 2764 Q5SY16 NOL9 Polynucleotide 5'-hydroxyl-kinase NOL9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 80.104 80.175 2 0.0012073 92334 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.089 56.736 62493000 0 0 0 0 9991400 4865800 0 0 0 0 7459000 11786000 0 11549000 16842000 18992 2764 17309 159296;159297;159298;159299;159300;159301 126869;126870;126871;126872 126869 4 GIEHDNPISR Unmodified 1136.5574 0.5574351 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 24.519 24.95 2 0.010696 26605 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 55.549 32.507 8154300 0 0 0 0 0 0 0 0 2701500 0 3668900 0 0 0 1784000 18993 5189 17310 159302;159303;159304 126873;126874 126873 2 GIEILTDMSRPVELSDR Oxidation (M) 1945.9779 0.97789093 1642 P50991 CCT4 T-complex protein 1 subunit delta yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 74.301 74.466 3 0.00093777 85332 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.438 38.835 38087000 0 0 0 0 0 5658600 0 0 4078800 0 0 7599600 4430100 6142800 10177000 18994 1642 17311 159305;159306;159307;159308;159309;159310 126875;126876 126876 2643 2 GIEPSSEGSK Unmodified 989.46655 0.46655441 4584 Q9NR09 BIRC6 Baculoviral IAP repeat-containing protein 6 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 11.427 9.886 2 0.0074055 12204 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.502 55.855 10924000 0 9372500 0 0 0 0 0 0 0 0 0 0 1552000 0 0 18995 4584 17312 159311;159312 126877;126878 126877 1 GIEPTGNMVK Oxidation (M) 1060.5223 0.52229515 487 O75369 FLNB Filamin-B yes yes 0 1 0 By MS/MS By matching By matching By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 21.978 22.225 2 0.007709 22834 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 53.775 27.836 26211000 0 0 0 2161100 0 0 2096700 3413300 0 0 8084100 7519000 0 2936600 0 18996 487 17313 159313;159314;159315;159316;159317;159318 126879;126880 126879 617 2 GIESTDEAK Unmodified 948.44001 0.4400053 4471 Q9H9E3 COG4 Conserved oligomeric Golgi complex subunit 4 yes yes 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 8.9055 9.0395 2 0.020833 6748 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.786 24.679 15505000 0 0 0 1138200 809920 1608500 1411800 915630 869380 796170 2353200 1319800 1503300 987150 1792300 18997 4471 17314 159319;159320;159321;159322;159323;159324;159325;159326;159327;159328;159329;159330 126881 126881 1 GIETDGSNLSGVSAK Unmodified 1433.6998 0.69980182 5019 Q9UMX1 SUFU Suppressor of fused homolog yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 73.751 73.366 2 0.00031515 52148 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.68 92.206 96152000 0 29403000 0 2186500 2801300 0 5474600 4094900 5770800 6215900 5939600 10899000 8008700 6880700 8477800 18998 5019 17315 159331;159332;159333;159334;159335;159336;159337;159338;159339;159340;159341;159342 126882;126883;126884;126885 126884 4 GIFEPFGR Unmodified 921.47085 0.47085192 2410 Q14498 RBM39 RNA-binding protein 39 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.807 74.871 2 0.0077288 86072 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 88.643 70.876 462090000 0 0 0 24037000 22124000 37370000 27932000 31087000 28491000 40977000 43815000 54059000 47196000 43538000 61465000 18999 2410 17316 159343;159344;159345;159346;159347;159348;159349;159350;159351;159352;159353;159354 126886;126887;126888;126889;126890;126891;126892;126893;126894;126895;126896;126897 126895 12 GIFGFTDSDCIGK Unmodified 1415.6391 0.63911582 1155 P23381 WARS Tryptophan--tRNA ligase, cytoplasmic;T1-TrpRS;T2-TrpRS yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 80.952 79.831 2 2.3018E-21 99485 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 144.65 120.5 497780000 58697000 315540000 39660000 1418300 2241100 5531700 2798400 2430400 2568600 7132500 6554500 8106100 3124800 8935400 33041000 19000 1155 17317 159355;159356;159357;159358;159359;159360;159361;159362;159363;159364;159365;159366;159367;159368;159369;159370 126898;126899;126900;126901;126902;126903;126904;126905;126906;126907;126908;126909;126910;126911 126901 14 GIFGSSAVPQPK Unmodified 1186.6346 0.63462279 397 O60341 KDM1A Lysine-specific histone demethylase 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 2 1 63.447 61.974 2 7.5009E-07 76391 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 115.71 94.186 520530000 176990000 81560000 11421000 0 20716000 28912000 24070000 21966000 19621000 23786000 28358000 39142000 0 0 43989000 19001 397 17318 159371;159372;159373;159374;159375;159376;159377;159378;159379;159380;159381;159382;159383;159384 126912;126913;126914;126915;126916;126917;126918;126919;126920;126921;126922;126923;126924;126925;126926 126919 12 GIFLLNR Unmodified 831.49667 0.49667274 2888 Q6IN85 SMEK1 Serine/threonine-protein phosphatase 4 regulatory subunit 3A yes yes 0 0 0 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 74.056 74.229 2 0.03059 84867 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.597 29.652 11339000 0 0 0 0 0 0 1387500 0 0 2015300 0 0 2272600 0 5663600 19002 2888 17319 159385;159386;159387;159388 126927 126927 1 GIFPVLCK Unmodified 932.51536 0.51535927 1000 P14618 PKM Pyruvate kinase PKM yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.385 77.443 2 0.030584 89654 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.441 40.777 1052200000 0 0 0 49932000 45970000 51294000 56429000 94285000 54918000 55125000 112390000 145970000 19445000 80900000 285550000 19003 1000 17320 159389;159390;159391;159392;159393;159394;159395;159396;159397;159398;159399;159400 126928;126929;126930;126931;126932;126933;126934;126935;126936;126937;126938;126939 126937 12 GIFTSEIGTK Unmodified 1051.555 0.55497548 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.238 58.353 2 0.0020595 66361 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 86.67 64.284 1210900000 0 0 0 77040000 54197000 84890000 86886000 74893000 60089000 85649000 118730000 144360000 129540000 133060000 161550000 19004 1986 17321 159401;159402;159403;159404;159405;159406;159407;159408;159409;159410;159411;159412 126940;126941;126942;126943;126944;126945;126946;126947;126948;126949;126950;126951 126947 11 GIFTSGTWEEK Unmodified 1253.5928 0.59281755 2484 Q15042 RAB3GAP1 Rab3 GTPase-activating protein catalytic subunit yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 67.326 66.556 2 0.0015906 88870 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 103.19 66.351 90909000 41925000 0 5112700 0 2032000 3872400 3192500 2773500 2556500 4609100 4159200 5465100 4822300 4100200 6289300 19005 2484 17322 159413;159414;159415;159416;159417;159418;159419;159420;159421;159422;159423;159424;159425 126952;126953;126954;126955 126954 3 GIGAGGSITGLK Unmodified 1029.5819 0.58185893 3607 Q92466 DDB2 DNA damage-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 53.611 49.215 2 3.0574E-05 61081 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 104.05 47.238 49715000 0 33247000 16468000 0 0 0 0 0 0 0 0 0 0 0 0 19006 3607 17323 159426;159427 126956;126957;126958;126959;126960 126957 5 GIGEFFR Unmodified 824.41809 0.41808807 2468 Q15004 KIAA0101 PCNA-associated factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 69.005 69.079 2 0.023821 78859 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 93.885 63.815 66716000 0 0 0 10559000 0 0 10847000 10192000 0 0 15775000 19341000 0 0 0 19007 2468 17324 159428;159429;159430;159431;159432 126961 126961 1 GIGEYVNIR Unmodified 1019.54 0.53999412 3642 Q92620 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 60.93 61.203 2 0.018695 70024 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 54.611 17.591 25430000 0 0 0 0 0 2214400 2553500 0 0 2539100 3800900 5023800 0 3625100 5672800 19008 3642 17325 159433;159434;159435;159436;159437;159438;159439 126962;126963 126962 2 GIGIENIHYLNDGLWHMKTYK Unmodified 2501.2525 0.25254965 4990 Q9ULC4 MCTS1 Malignant T-cell-amplified sequence 1 yes yes 0 0 1 By MS/MS 10 0 1 1 67.302 67.263 3 0.047898 77224 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 14.015 6.3936 5081500 0 0 0 0 0 5081500 0 0 0 0 0 0 0 0 0 19009 4990 17326 159440 126964 126964 1 GIGLAIVR Unmodified 797.51232 0.51232281 1033 P16152 CBR1 Carbonyl reductase [NADPH] 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 65.49 65.792 2 0.016585 74330 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.035 26.183 26564000 0 0 0 0 0 0 1543200 0 0 0 6735300 0 0 4128200 14157000 19010 1033 17327 159441;159442;159443;159444 126965;126966 126965 2 GIGLGNYHPATENPGTSSK Unmodified 1898.9123 0.91225421 1181 P25054 APC Adenomatous polyposis coli protein yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 48.306 48.557 3 0.0050018 54016 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 32.156 20.876 41311000 0 0 0 0 0 8475300 6081200 4189800 0 0 0 14974000 0 7590300 0 19011 1181 17328 159445;159446;159447;159448;159449 126967;126968 126968 2 GIGMGNIGPAGMGMEGIGFGINK 3 Oxidation (M) 2225.0279 0.027894369 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 3 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 21 1 1 2 2 2 2 2 2 2 1 2 2 76.985 77.088 2;3 9.6625E-99 89097 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 156.6 141.61 1020500000 0 0 0 8707600 18626000 97182000 49653000 92382000 57570000 121160000 135270000 139510000 31689000 88565000 180220000 19012 1681 17329 159450;159451;159452;159453;159454;159455;159456;159457;159458;159459;159460;159461;159462;159463;159464;159465;159466;159467;159468;159469;159470 126969;126970;126971;126972;126973;126974;126975;126976;126977;126978 126978 2695;2696;2697 9 GIGMGNIGPAGMGMEGIGFGINK 2 Oxidation (M) 2209.033 0.032979747 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 2 0 By MS/MS By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 2 82.494 82.571 2;3 1.075E-20 94785 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.467 79.337 41477000 0 0 0 0 2054500 4022300 0 3046900 0 5762400 0 0 0 0 26591000 19013 1681 17329 159471;159472;159473;159474;159475;159476 126979;126980 126980 2695;2696;2697 2 GIGMNEPLVDCEGYPR Oxidation (M) 1821.8026 0.80256911 131 O00233 PSMD9 26S proteasome non-ATPase regulatory subunit 9 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 63.347 63.737 2 7.9197E-08 72842 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 88.187 70.819 22325000 0 0 0 0 0 0 0 0 0 0 4484600 5673600 0 4942700 7224000 19014 131 17330 159477;159478;159479;159480;159481 126981;126982;126983;126984 126984 180 4 GIGPTYSSK Unmodified 908.46035 0.46034682 3307 Q8N142 ADSSL1 Adenylosuccinate synthetase isozyme 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 25.532 21.362 2 0.021764 26986 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 73.665 38.772 16984000 0 16984000 0 0 0 0 0 0 0 0 0 0 0 0 0 19015 3307 17331 159482;159483 126985;126986 126985 2 GIGPVYSSK Unmodified 906.48108 0.48108226 1283 P30520 ADSS Adenylosuccinate synthetase isozyme 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 35.352 30.521 2 0.015194 42576 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.296 57.324 523250000 152870000 357070000 13308000 0 0 0 0 0 0 0 0 0 0 0 0 19016 1283 17332 159484;159485;159486 126987;126988;126989 126988 3 GIGQEHFFK Unmodified 1061.5294 0.52942943 372 O43823 AKAP8 A-kinase anchor protein 8 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 53.304 47.272 2 0.032608 65747 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.156 36.733 13467000 11340000 0 2127400 0 0 0 0 0 0 0 0 0 0 0 0 19017 372 17333 159487;159488 126990;126991 126990 2 GIGQVLPTHLMEER Unmodified 1578.8188 0.81881152 2114 Q05397 PTK2 Focal adhesion kinase 1 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 75.833 76.038 3 0.0023533 87268 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.532 40.628 11227000 0 0 0 0 0 0 0 0 0 2212800 0 0 0 0 9013800 19018 2114 17334 159489;159490 126992 126992 1 GIGSEDARK Unmodified 931.47231 0.47230849 4871 Q9UEE9 CFDP1 Craniofacial development protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 6.9706 4.1043 2 0.034193 6005 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 86.833 48.7 82407000 18575000 0 63832000 0 0 0 0 0 0 0 0 0 0 0 0 19019 4871 17335 159491;159492 126993 126993 1 GIGSTVQPAAK Unmodified 1027.5662 0.56620887 3105 Q7Z589 EMSY Protein EMSY yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 24.061 23.922 2 0.0022949 30702 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.38 49.942 48318000 0 15532000 0 0 1885200 2011400 2727200 2853400 2237000 2561300 2506500 3794600 3183700 3782700 5243600 19020 3105 17336 159493;159494;159495;159496;159497;159498;159499;159500;159501;159502;159503;159504 126994;126995;126996;126997;126998;126999;127000;127001;127002;127003;127004;127005 126997 11 GIGTDEFTLNR Unmodified 1221.599 0.59896556 968 P12429 ANXA3 Annexin A3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 62.982 63.38 2 0.00030437 71617 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 113.71 80.156 37026000 0 0 0 0 0 0 0 0 0 0 7254900 4852500 0 4193000 20726000 19021 968 17337 159505;159506;159507;159508 127006;127007;127008 127006 3 GIGTLHLKPTANQK Unmodified 1476.8413 0.84126152 4978 Q9UKX7 NUP50 Nuclear pore complex protein Nup50 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 36.756 36.91 3 4.618E-14 39076 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.547 70.292 160400000 0 0 0 7025200 6924000 16705000 10889000 0 12469000 14169000 0 30593000 22213000 10412000 28999000 19022 4978 17338 159509;159510;159511;159512;159513;159514;159515;159516;159517;159518 127009;127010;127011;127012;127013;127014;127015;127016;127017;127018;127019;127020 127013 11 GIGTNEQAIIDVLTK Unmodified 1570.8566 0.85663681 2812 Q5VT79;P13928 ANXA8L2;ANXA8 Annexin A8-like protein 2;Annexin A8 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.8 3.12 3 1 1 1 2 1 1 92.259 88.542 2 4.9888E-16 111020 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 152.38 136.49 292080000 9796500 266250000 11623000 0 0 0 0 0 0 0 0 0 0 0 4411600 19023 2812 17339 159519;159520;159521;159522;159523 127021;127022;127023;127024;127025 127021 5 GIGTPPNTTPIK Unmodified 1194.6608 0.66083754 717 O96028 WHSC1 Histone-lysine N-methyltransferase NSD2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 46.043 45.513 2 0.011363 57843 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.558 35.768 35119000 0 14000000 0 0 0 0 0 0 0 0 3866500 4500700 4736800 2880500 5134600 19024 717 17340 159524;159525;159526;159527;159528;159529 127026;127027 127026 2 GIGTPQPDVAK Unmodified 1081.5768 0.57677356 5298 Q9Y6X8 ZHX2 Zinc fingers and homeoboxes protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 34.784 34.16 2 0.0021907 36663 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.846 44.691 73932000 0 20154000 0 3595300 3216700 3625400 5296500 6076900 4225700 4502000 6296800 0 5341000 5030000 6571800 19025 5298 17341 159530;159531;159532;159533;159534;159535;159536;159537;159538;159539;159540;159541;159542 127028;127029;127030;127031;127032;127033;127034;127035;127036;127037;127038;127039 127032 12 GIHDADSEARIEAR Unmodified 1538.7437 0.74373232 3094 Q7Z460 CLASP1 CLIP-associating protein 1 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 23.907 24.183 3 0.0016929 24137 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 50.563 36.21 39730000 0 0 0 0 0 4985000 2560600 3201400 4322000 4123900 0 6753000 4901400 3426300 5456400 19026 3094 17342 159543;159544;159545;159546;159547;159548;159549;159550;159551 127040;127041 127041 2 GIHELVDIREPSAEIK Unmodified 1804.9683 0.96831253 4326 Q9H0E9 BRD8 Bromodomain-containing protein 8 yes yes 0 0 1 By MS/MS By matching By matching By matching By matching By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 68.767 67.675 4 8.6076E-06 90104 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.069 67.025 75651000 36585000 0 0 0 0 0 0 0 0 0 6672000 8565300 4975500 5629100 13225000 19027 4326 17343 159552;159553;159554;159555;159556;159557 127042;127043;127044 127044 3 GIHNSIGDYR Unmodified 1130.5469 0.54687041 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 27.359 27.284 2 0.0029855 29278 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 108.98 83.038 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19028 1029 17344 159558;159559;159560 127045;127046;127047 127045 3 GIHPTIISESFQK Unmodified 1455.7722 0.7721789 1642 P50991 CCT4 T-complex protein 1 subunit delta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 8 4 24 4 5 3 2 2 2 2 2 2 2 2 2 2 2 2 64.247 62.525 2;3 1.9107E-36 78615 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 225.01 208.09 10848000000 5347700000 1369700000 588080000 130520000 117600000 357550000 186920000 215240000 158210000 336820000 381600000 399240000 250740000 395310000 612730000 19029 1642 17345 159561;159562;159563;159564;159565;159566;159567;159568;159569;159570;159571;159572;159573;159574;159575;159576;159577;159578;159579;159580;159581;159582;159583;159584;159585;159586;159587;159588;159589;159590;159591;159592;159593;159594;159595;159596 127048;127049;127050;127051;127052;127053;127054;127055;127056;127057;127058;127059;127060;127061;127062;127063;127064;127065;127066;127067;127068;127069;127070;127071;127072;127073;127074;127075;127076;127077;127078;127079;127080;127081;127082;127083;127084;127085;127086 127078 34 GIHQSTIDLK Unmodified 1110.6033 0.60332266 2401 Q14258 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 38.287 33.295 2 0.0014154 43762 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 111.06 78.062 348600000 175490000 105880000 67226000 0 0 0 0 0 0 0 0 0 0 0 0 19030 2401 17346 159597;159598;159599 127087;127088;127089 127087 3 GIHVETLETEK Unmodified 1254.6456 0.6455814 662 O95453 PARN Poly(A)-specific ribonuclease PARN yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS 7.18 3.74 3 1 7 1 1 2 1 1 1 1 1 1 1 41.552 39.978 2;3 0.00033688 51304 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 96.015 78.206 200570000 10180000 29101000 128290000 0 0 2396300 0 0 0 4408600 5898100 5541100 5101600 2937500 6706900 19031 662 17347 159600;159601;159602;159603;159604;159605;159606;159607;159608;159609;159610 127090;127091;127092;127093;127094;127095 127095 5 GIIASSVGTILK Unmodified 1157.702 0.70197407 1061 P17812 CTPS1 CTP synthase 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 80.953 79.956 2 0.00013039 91666 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.898 47.594 81533000 25858000 17535000 0 0 1220000 3833900 1514100 2565500 1787100 3715600 3290500 0 1628600 2871000 15715000 19032 1061 17348 159611;159612;159613;159614;159615;159616;159617;159618;159619;159620;159621;159622 127096;127097;127098 127097 3 GIIELLGSK Unmodified 928.55933 0.55933258 5061 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By matching 10 0 6 1 1 1 1 1 1 78.34 78.484 2 0.027124 89917 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 49.536 12.377 13391000 0 0 0 0 0 1678100 0 988190 0 3059100 1093500 0 0 2300800 4271100 19033 5061 17349 159623;159624;159625;159626;159627;159628 127099;127100 127100 2 GIIIMGEDDDSHPSEMRLYK Unmodified 2305.0719 0.071867674 4298 Q9GZP4 PITHD1 PITH domain-containing protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 80.292 72.162 4 0.028557 94748 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 18.155 10.23 13339000 13339000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19034 4298 17350 159629 127101 127101 1 GIILAGTEEQK Unmodified 1157.6292 0.62920306 4445 Q9H845 ACAD9 Acyl-CoA dehydrogenase family member 9, mitochondrial yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 49.966 44.665 2 2.8663E-05 57906 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.73 71.348 29817000 0 29817000 0 0 0 0 0 0 0 0 0 0 0 0 0 19035 4445 17351 159630;159631 127102;127103 127102 2 GIILEEMK Unmodified 931.50485 0.50485417 2670 Q3L8U1 CHD9 Chromodomain-helicase-DNA-binding protein 9 yes yes 0 0 0 By MS/MS 2 0 1 1 67.163 63.42 2 0.049233 78565 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 66.799 16.167 2327300 0 0 2327300 0 0 0 0 0 0 0 0 0 0 0 0 19036 2670 17352 159632 127104 127104 1 GIINPFPASK Unmodified 1042.5811 0.58113065 3101 Q7Z4S6 KIF21A Kinesin-like protein KIF21A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 68.737 67.921 2 0.0052248 76861 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 69.812 46.288 136240000 36167000 0 3931900 9198900 5869700 8307400 8674500 0 5581000 8137400 11704000 11890000 8439200 7562400 10771000 19037 3101 17353 159633;159634;159635;159636;159637;159638;159639;159640;159641;159642;159643;159644;159645 127105;127106;127107;127108;127109;127110;127111;127112;127113;127114;127115;127116 127112 12 GIIPNQSR Unmodified 883.48756 0.48756462 616 O95049 TJP3 Tight junction protein ZO-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 30.439 30.503 2 0.012197 33612 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 75.189 5.8059 56155000 0 0 0 7782300 7229900 9995500 6952400 0 7266800 0 0 0 10006000 0 6922800 19038 616 17354 159646;159647;159648;159649;159650;159651;159652 127117;127118;127119;127120;127121 127121 5 GIITAVEPSTPTVLR Unmodified 1552.8825 0.88245763 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.889 78.947 2 1.1011E-19 91221 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 111.27 95.012 282700000 0 0 0 7863900 16083000 20550000 20707000 26381000 18524000 32977000 28856000 30593000 23495000 25444000 31229000 19039 5262 17355 159653;159654;159655;159656;159657;159658;159659;159660;159661;159662;159663;159664 127122;127123;127124;127125;127126;127127;127128;127129;127130;127131;127132 127132 11 GIIWGEDTLMEYLENPK Unmodified 2006.9659 0.96592926 2028 P99999 CYCS Cytochrome c yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 99.136 93.395 3 9.3784E-47 117942 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 137.52 128.15 46007000 44423000 1583900 0 0 0 0 0 0 0 0 0 0 0 0 0 19040 2028 17356 159665;159666 127133;127134;127135 127135 3 GIIWGEDTLMEYLENPK Oxidation (M) 2022.9608 0.96084389 2028 P99999 CYCS Cytochrome c yes yes 0 1 0 By MS/MS 2 0 1 1 97.185 89.054 2 5.6119E-10 115018 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 106.54 93.562 10652000 10652000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19041 2028 17356 159667 127136 127136 3280 0 GIIYGTDGQEAPIYELTSQFTGLK Unmodified 2600.301 0.30099921 2447 Q14790 CASP8 Caspase-8;Caspase-8 subunit p18;Caspase-8 subunit p10 yes yes 0 0 0 By MS/MS 2 0 1 1 99.872 95.159 3 0.00071923 117694 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 39.693 36.759 11711000 0 11711000 0 0 0 0 0 0 0 0 0 0 0 0 0 19042 2447 17357 159668 127137 127137 1 GIKPVTLELGGK Unmodified 1210.7285 0.72852317 1561 P49189 ALDH9A1 4-trimethylaminobutyraldehyde dehydrogenase yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By matching 10 0 5 1 1 1 1 1 58.197 58.336 3 0.0070517 67487 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 35.677 20.534 16603000 0 0 0 5114300 0 0 0 3827800 0 0 2824800 0 2182100 0 2653800 19043 1561 17358 159669;159670;159671;159672;159673 127138;127139 127139 2 GILAADESTGSIAK Unmodified 1331.6933 0.69325988 771 P04075 ALDOA Fructose-bisphosphate aldolase A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.19 3.84 1 14 4 12 5 12 2 1 1 1 1 1 1 1 1 1 1 1 1 56.436 54.221 2 1.5661E-23 69027 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 141.1 120.77 25998000000 1258200000 18178000000 794220000 189050000 102940000 140380000 160520000 157380000 112280000 204810000 868320000 694060000 144240000 644850000 2348700000 19044 771 17359 159674;159675;159676;159677;159678;159679;159680;159681;159682;159683;159684;159685;159686;159687;159688;159689;159690;159691;159692;159693;159694;159695;159696;159697;159698;159699;159700;159701;159702;159703;159704 127140;127141;127142;127143;127144;127145;127146;127147;127148;127149;127150;127151;127152;127153;127154;127155;127156;127157;127158;127159;127160;127161;127162;127163;127164;127165;127166;127167;127168;127169;127170;127171;127172;127173;127174;127175;127176;127177;127178;127179;127180;127181;127182;127183;127184 127168 43 GILAADESTGSIAKR Unmodified 1487.7944 0.79437091 771 P04075 ALDOA Fructose-bisphosphate aldolase A yes yes 0 0 1 By MS/MS 10 0 1 1 43.886 44.64 3 0.00043808 49563 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 42.813 27.914 13935000 0 0 0 0 0 0 0 0 0 0 0 13935000 0 0 0 19045 771 17360 159705 127185 127185 1 GILAADESVGSMAK Oxidation (M) 1363.6653 0.66533057 897 P09972 ALDOC Fructose-bisphosphate aldolase C yes yes 0 1 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 50.815 45.954 2 2.1854E-29 59908 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.22 131.12 167510000 0 162530000 4979200 0 0 0 0 0 0 0 0 0 0 0 0 19046 897 17361 159706;159707;159708 127186;127187;127188 127187 1161 3 GILAADESVGSMAK Unmodified 1347.6704 0.67041595 897 P09972 ALDOC Fructose-bisphosphate aldolase C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 6.71 3.81 2 1 4 2 1 1 1 1 1 63.163 61.145 2 0.00092909 78171 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.229 77.918 278170000 0 252870000 3163100 10578000 0 0 0 0 0 0 0 0 2507900 2769000 6278900 19047 897 17361 159709;159710;159711;159712;159713;159714;159715 127189;127190;127191;127192 127189 3 GILADEDSSRPVWLK Unmodified 1684.8784 0.87843489 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 3 2 2 2 1 1 1 1 2 2 76.497 74.957 2;3 2.4468E-30 96859 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 146.07 122.32 515640000 199410000 54270000 0 0 0 52499000 0 17117000 13862000 17753000 0 21066000 10973000 18382000 110320000 19048 1565 17362 159716;159717;159718;159719;159720;159721;159722;159723;159724;159725;159726;159727;159728;159729;159730;159731;159732 127193;127194;127195;127196;127197;127198;127199;127200;127201;127202;127203;127204 127201 11 GILEESPSEAEDFISGITQTMVEAVAEVEK Unmodified 3207.5381 0.53807095 2456 Q14966 ZNF638 Zinc finger protein 638 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 106.74 100.29 3 1.955E-91 126323 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 132.69 127.2 18779000 16929000 1849200 0 0 0 0 0 0 0 0 0 0 0 0 0 19049 2456 17363 159733;159734 127205;127206 127206 2 GILEQGWQADSTTR Unmodified 1560.7532 0.75323437 4040 Q99627 COPS8 COP9 signalosome complex subunit 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.912 63.079 2 6.8923E-19 71963 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 128.01 109.23 106730000 0 0 0 0 3736000 8909800 4843500 6490900 3441600 8907100 17486000 15846000 8015600 10233000 18821000 19050 4040 17364 159735;159736;159737;159738;159739;159740;159741;159742;159743;159744;159745;159746 127207;127208;127209;127210;127211;127212;127213;127214;127215;127216;127217;127218 127209 12 GILEYLTVAEVVETMEDLVTYTK Unmodified 2615.3292 0.3291878 1073 P18206 VCL Vinculin yes yes 0 0 0 By MS/MS 2 0 1 1 107.69 99.56 3 1.9373E-23 127586 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.71 94.454 7806400 7806400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19051 1073 17365 159747 127219 127219 1 GILFVGSGVSGGEEGAR Unmodified 1590.8002 0.80018457 1680 P52209 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 74.249 74.301 2 6.7585E-10 84846 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 114.72 106.49 314670000 0 0 0 7004100 5948000 9079100 13701000 0 10063000 11421000 48371000 38211000 9221900 26837000 134810000 19052 1680 17366 159748;159749;159750;159751;159752;159753;159754;159755;159756;159757;159758 127220;127221;127222;127223;127224;127225;127226;127227;127228;127229;127230 127223 10 GILGTLNK Unmodified 814.49125 0.49125301 6 A0MZ66 KIAA1598 Shootin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 50.953 49.611 2 0.0099306 55907 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 81.297 28.614 192870000 89152000 20922000 0 5534600 6108600 8807300 0 7096300 0 7724300 11393000 0 0 12597000 23540000 19053 6 17367 159759;159760;159761;159762;159763;159764;159765;159766;159767;159768 127231;127232;127233;127234;127235;127236;127237;127238 127231 8 GILGYTEHQVVSSDFNSDTHSSTFDAGAGIALNDHFVK Unmodified 4035.8875 0.88750261 782 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.667 1 4 4 5 3 1 92.087 88.557 4;5 7.1245E-42 95607 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 81.18 76.946 550530000 508180000 33962000 8389100 0 0 0 0 0 0 0 0 0 0 0 0 19054 782 17368 159769;159770;159771;159772;159773;159774;159775;159776;159777 127239;127240;127241;127242;127243;127244;127245;127246 127243 7 GILLFGPPGTGK Unmodified 1155.6652 0.66519463 484;5026;2956 O75351;Q6PIW4;Q9UN37 VPS4B;FIGNL1;VPS4A Vacuolar protein sorting-associated protein 4B;Fidgetin-like protein 1;Vacuolar protein sorting-associated protein 4A no no 0 0 0 By MS/MS 2 0 1 1 89.227 81.097 2 0.005842 105427 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.325 55.383 6727700 6727700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19055 484;2956;5026 17369 159778 127247 127247 1 GILLFGTK Unmodified 847.51674 0.51673948 1591 P49748 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.589 76.649 2 0.00622 88694 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 102.71 68.975 392500000 0 0 0 12457000 33883000 19670000 16279000 22569000 15423000 31880000 29145000 64562000 51093000 57130000 38410000 19056 1591 17370 159779;159780;159781;159782;159783;159784;159785;159786;159787;159788;159789;159790 127248;127249;127250;127251;127252;127253;127254;127255;127256;127257;127258;127259 127254 12 GILLTDGSEK Unmodified 1031.5499 0.5498901 1655 P51531 SMARCA2 Probable global transcription activator SNF2L2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 45.56 44.62 2 1.1877E-05 55020 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 133.86 105.44 297620000 0 119590000 4010400 12314000 7893000 14592000 15409000 13353000 13643000 18917000 24462000 22413000 12466000 18560000 0 19057 1655 17371 159791;159792;159793;159794;159795;159796;159797;159798;159799;159800;159801;159802;159803;159804 127260;127261;127262;127263;127264;127265;127266;127267;127268;127269;127270;127271;127272;127273;127274;127275;127276;127277;127278 127267 19 GILLYGPPGCGK Unmodified 1230.6431 0.64307898 1504 P46459 NSF Vesicle-fusing ATPase yes yes 0 0 0 By MS/MS 2 0 1 1 76.995 68.865 2 0.028173 90809 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.113 14.666 7466100 7466100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19058 1504 17372 159805 127279 127279 1 GILPMNPR Unmodified 896.49021 0.49020716 4779 Q9NZN8 CNOT2 CCR4-NOT transcription complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 55.894 56.13 2 0.013435 63957 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 72.355 55.8 8537500 0 0 0 0 0 0 0 0 0 0 0 0 8537500 0 0 19059 4779 17373 159806;159807 127280;127281;127282 127282 3 GILSLPHQASPVSR Unmodified 1460.81 0.80996139 558 O75925 PIAS1 E3 SUMO-protein ligase PIAS1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 2 1 1 1 1 1 1 1 1 64.026 63.848 3 0.00016609 73178 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 64.675 47.273 15558000 0 0 0 0 496090 0 0 0 0 0 0 0 15062000 0 0 19060 558 17374 159808;159809;159810;159811;159812;159813;159814;159815;159816;159817;159818 127283;127284;127285;127286;127287;127288;127289;127290;127291;127292;127293 127290 11 GILTTEK Unmodified 760.43307 0.43306943 4395 Q9H4A5 GOLPH3L Golgi phosphoprotein 3-like yes yes 0 0 0 By MS/MS By matching 2.33 0.471 2 1 2 1 27.627 23.745 2 0.032506 31097 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.512 53.154 215990000 0 213860000 2130900 0 0 0 0 0 0 0 0 0 0 0 0 19061 4395 17375 159819;159820;159821 127294;127295 127294 2 GILYIDSVGFNGR Unmodified 1409.7303 0.73031409 4257 Q9BZ23 PANK2 Pantothenate kinase 2, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 82.746 82.715 2 0.00070114 95744 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 88.681 74.007 65825000 0 0 0 3449200 9025300 16049000 0 0 0 10196000 9191600 17913000 0 0 0 19062 4257 17376 159822;159823;159824;159825;159826;159827 127296;127297;127298;127299 127299 4 GIMEEDEACGR Oxidation (M) 1281.4966 0.49655068 1010 P14923 JUP Junction plakoglobin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 18.025 18.083 2 0.00017576 18355 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 92.062 90.859 35419000 0 0 0 18277000 2955400 2381800 1779000 0 1791500 2598600 0 0 2958100 2677500 0 19063 1010 17377 159828;159829;159830;159831;159832;159833;159834;159835;159836;159837 127300;127301;127302;127303;127304;127305;127306;127307;127308;127309;127310 127308 1394 11 GIMEEDEACGR Unmodified 1265.5016 0.50163606 1010 P14923 JUP Junction plakoglobin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.855 30.081 2 0.00029926 32872 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 107.57 104.32 71149000 0 0 0 32106000 2900600 0 0 3830300 2348500 4077500 3840200 4877200 8892900 4576900 3698600 19064 1010 17377 159838;159839;159840;159841;159842;159843;159844;159845;159846;159847;159848;159849 127311;127312;127313;127314;127315;127316;127317;127318;127319;127320;127321 127320 11 GIMGEDTYPYQGK Oxidation (M) 1473.6446 0.64459513 893 P09668 CTSH Pro-cathepsin H;Cathepsin H mini chain;Cathepsin H;Cathepsin H heavy chain;Cathepsin H light chain yes yes 0 1 0 By MS/MS By matching 10 0 2 1 1 40.198 40.177 2 0.00048446 45163 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 71.349 64.816 16889000 0 0 0 12718000 0 0 0 0 0 0 4171500 0 0 0 0 19065 893 17378 159850;159851 127322 127322 1145 1 GIMGEDTYPYQGK Unmodified 1457.6497 0.6496805 893 P09668 CTSH Pro-cathepsin H;Cathepsin H mini chain;Cathepsin H;Cathepsin H heavy chain;Cathepsin H light chain yes yes 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 54.819 54.692 2 0.0001699 62909 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 83.883 75.351 21582000 0 0 0 13833000 0 0 2046200 0 0 0 0 0 0 5702300 0 19066 893 17378 159852;159853;159854 127323 127323 1 GINSSNVENQLQATQAAR Unmodified 1899.9399 0.93986594 1682 P52292 KPNA2 Importin subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 1 2 2 2 2 2 2 2 2 2 2 55.306 55.498 2;3 3.1385E-83 62844 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 203.82 190.15 724570000 0 0 0 26469000 23481000 71796000 47400000 44626000 38675000 61264000 63352000 97620000 70477000 61752000 117660000 19067 1682 17379 159855;159856;159857;159858;159859;159860;159861;159862;159863;159864;159865;159866;159867;159868;159869;159870;159871;159872;159873;159874;159875;159876 127324;127325;127326;127327;127328;127329;127330;127331;127332;127333;127334;127335;127336;127337;127338 127332 11 GINSSNVENQLQATQAARK Unmodified 2028.0348 0.034828962 1682 P52292 KPNA2 Importin subunit alpha-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 4 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50.489 48.982 2;3 1.0995E-53 55336 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 148.13 126.29 1485800000 629530000 76192000 120380000 33855000 29048000 34002000 68623000 58204000 43617000 71277000 53684000 71959000 52171000 51603000 91648000 19068 1682 17380 159877;159878;159879;159880;159881;159882;159883;159884;159885;159886;159887;159888;159889;159890;159891;159892 127339;127340;127341;127342;127343;127344;127345;127346;127347;127348;127349;127350;127351;127352;127353;127354;127355 127343 16 GINTLVTYDMVPEPK Oxidation (M) 1691.844 0.84402321 1110 P20674 COX5A Cytochrome c oxidase subunit 5A, mitochondrial yes yes 0 1 0 By MS/MS 2 0 1 1 79.595 74.882 2 0.00070627 93253 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.605 48.928 22018000 0 22018000 0 0 0 0 0 0 0 0 0 0 0 0 0 19069 1110 17381 159893 127356 127356 1596 1 GIPAPEEER Unmodified 996.48762 0.4876242 661 O95433 AHSA1 Activator of 90 kDa heat shock protein ATPase homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 29.197 29.289 2 0.032784 31714 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 47.198 36.129 100550000 0 0 0 14138000 5584400 15806000 9352900 0 0 18380000 18747000 18538000 0 0 0 19070 661 17382 159894;159895;159896;159897;159898;159899;159900 127357;127358 127357 2 GIPAPEEERTR Unmodified 1253.6364 0.6364137 661 O95433 AHSA1 Activator of 90 kDa heat shock protein ATPase homolog 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 1 1 1 2 1 1 2 2 2 2 2 24.767 25.051 2;3 0.00040258 26632 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 66.267 61.545 450270000 0 0 0 20387000 16437000 48929000 28650000 26177000 16602000 42739000 39332000 36221000 35353000 46368000 93078000 19071 661 17383 159901;159902;159903;159904;159905;159906;159907;159908;159909;159910;159911;159912;159913;159914;159915;159916;159917;159918 127359;127360;127361;127362;127363;127364;127365;127366;127367;127368;127369;127370;127371;127372 127364 11 GIPDDRDGLFDTIQR Unmodified 1716.8431 0.84311201 3701;164 O00507;Q93008 USP9Y;USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-Y;Probable ubiquitin carboxyl-terminal hydrolase FAF-X no no 0 0 1 By matching By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 73.144 73.183 3 7.048E-06 83708 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.534 69.9 54482000 0 0 0 3208900 0 8074300 0 0 0 6317600 0 13204000 0 0 23677000 19072 164;3701 17384 159919;159920;159921;159922;159923 127373;127374;127375;127376 127375 4 GIPDDRDGLFDTIQRSK Unmodified 1931.9701 0.97010344 3701;164 O00507;Q93008 USP9Y;USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-Y;Probable ubiquitin carboxyl-terminal hydrolase FAF-X no no 0 0 2 By MS/MS 2 0 1 1 76.574 68.444 4 0.0023521 90176 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.463 40.057 11935000 11935000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19073 164;3701 17385 159924 127377 127377 1 GIPEHLMGK Oxidation (M) 996.50625 0.50625115 3061 Q7LBC6 KDM3B Lysine-specific demethylase 3B yes yes 0 1 0 By matching By matching By matching By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 24.412 24.522 2 0.021782 25429 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 47.082 25.4 33661000 0 0 0 0 3768300 0 7146500 5219100 0 3998700 0 0 8496900 5031200 0 19074 3061 17386 159925;159926;159927;159928;159929;159930 127378 127378 1 GIPEHLMGK Unmodified 980.51134 0.51133653 3061 Q7LBC6 KDM3B Lysine-specific demethylase 3B yes yes 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 40.518 40.585 2 0.0090061 45262 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 67.981 49.198 78386000 0 0 0 9842900 6863300 0 0 14749000 11604000 3604700 0 0 0 12175000 19547000 19075 3061 17386 159931;159932;159933;159934;159935;159936;159937 127379;127380 127379 2 GIPELEQYDPPELADSSGR Unmodified 2071.9698 0.96982867 3907 Q96KG9 SCYL1 N-terminal kinase-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 1 2 2 2 2 2 2 2 2 2 2 2 81.276 81.357 2;3 1.3682E-46 94259 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 127.03 114.04 267430000 0 0 0 3436300 16629000 28254000 18019000 19796000 16576000 37895000 25734000 30839000 14303000 17726000 38226000 19076 3907 17387 159938;159939;159940;159941;159942;159943;159944;159945;159946;159947;159948;159949;159950;159951;159952;159953;159954;159955;159956;159957;159958;159959;159960 127381;127382;127383;127384;127385;127386;127387;127388;127389;127390;127391;127392;127393;127394;127395;127396;127397 127395 17 GIPGFGNTGNISGAPVTYPSAGAQGVNNTASGNNSR Unmodified 3403.6141 0.61412171 3199 Q86XP3 DDX42 ATP-dependent RNA helicase DDX42 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.082 80.141 3 7.0378E-70 92444 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.567 81.096 156410000 0 0 0 3131900 8859700 12519000 9444300 12804000 11092000 19271000 15174000 19957000 10204000 10500000 23452000 19077 3199 17388 159961;159962;159963;159964;159965;159966;159967;159968;159969;159970;159971;159972 127398;127399;127400;127401;127402;127403;127404;127405;127406;127407;127408;127409;127410;127411 127401 14 GIPHLVTHDAR Unmodified 1214.652 0.65200419 1905 P62701;Q8TD47;P22090 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 1 1 1 2 1 1 2 32.66 32.919 2;3 0.0018055 34031 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.842 47.17 1561600000 0 0 0 90274000 51489000 114170000 126650000 127000000 108540000 115970000 154980000 207290000 121630000 113360000 230250000 19078 1905 17389 159973;159974;159975;159976;159977;159978;159979;159980;159981;159982;159983;159984;159985;159986 127412;127413;127414;127415;127416;127417;127418;127419;127420;127421;127422;127423;127424;127425;127426;127427;127428;127429;127430;127431;127432 127417 18 GIPLATGDTSPEPELLPGAPLPPPK Unmodified 2463.3261 0.32609175 546 O75821 EIF3G Eukaryotic translation initiation factor 3 subunit G yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.59 2.96 3 2 22 1 4 2 2 2 2 2 2 2 2 2 2 2 89.974 89.16 2;3 1.5417E-20 106367 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 87.208 77.226 1506900000 11795000 1266300000 0 0 12211000 15782000 9918900 14339000 10996000 30545000 27486000 27659000 12417000 19814000 47546000 19079 546 17390 159987;159988;159989;159990;159991;159992;159993;159994;159995;159996;159997;159998;159999;160000;160001;160002;160003;160004;160005;160006;160007;160008;160009;160010;160011;160012;160013 127433;127434;127435;127436;127437;127438;127439;127440;127441;127442;127443;127444;127445;127446;127447;127448;127449;127450;127451;127452;127453 127444 18 GIPLESTDGER Unmodified 1172.5673 0.56733108 2199;869;174 Q12857;Q14938;O00712;P08651 NFIA;NFIX;NFIB;NFIC Nuclear factor 1 A-type;Nuclear factor 1 X-type;Nuclear factor 1 B-type;Nuclear factor 1 C-type no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.896 40.076 2 0.00031887 44986 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 120.99 89.053 1701200000 0 0 0 64377000 83794000 103100000 122420000 107420000 92495000 194940000 174500000 138320000 151880000 176200000 291700000 19080 2199;174;869 17391 160014;160015;160016;160017;160018;160019;160020;160021;160022;160023;160024;160025 127454;127455;127456;127457;127458;127459;127460;127461;127462;127463;127464;127465;127466;127467;127468 127454 14 GIPLESTDGERLMK Unmodified 1544.7868 0.78684269 174 O00712 NFIB Nuclear factor 1 B-type yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 66.66 61.832 3 0.0055291 75893 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 54.524 41.111 32022000 0 21359000 10663000 0 0 0 0 0 0 0 0 0 0 0 0 19081 174 17392 160026;160027 127469;127470;127471 127470 3 GIPLESTDGERLVK Unmodified 1512.8148 0.814772 2199;869 Q12857;P08651 NFIA;NFIC Nuclear factor 1 A-type;Nuclear factor 1 C-type no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.66 6 1 15 2 2 3 1 2 1 2 1 2 1 1 2 2 60.217 58.649 2;3 6.764E-11 73396 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 136.5 108.64 711300000 35817000 270070000 183920000 0 0 8555400 19363000 11924000 24237000 19869000 31073000 11939000 20498000 23622000 50411000 19082 2199;869 17393 160028;160029;160030;160031;160032;160033;160034;160035;160036;160037;160038;160039;160040;160041;160042;160043;160044;160045;160046;160047;160048;160049 127472;127473;127474;127475;127476;127477;127478;127479;127480;127481;127482;127483;127484;127485;127486;127487 127483 12 GIPNMLLSEEETES Oxidation (M) 1563.6974 0.69741856 4920 Q9UI30 TRMT112 Multifunctional methyltransferase subunit TRM112-like protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 2 2 2 2 1 1 2 1 1 2 1 2 74.397 74.425 2 0.00023354 86048 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 76.282 61.608 444570000 0 0 0 35412000 44424000 42906000 50618000 16110000 19446000 53892000 27932000 36674000 44318000 18263000 54578000 19083 4920 17394 160050;160051;160052;160053;160054;160055;160056;160057;160058;160059;160060;160061;160062;160063;160064;160065;160066;160067;160068 127488;127489;127490;127491;127492;127493;127494;127495;127496 127490 6275 9 GIPNMLLSEEETES Unmodified 1547.7025 0.70250394 4920 Q9UI30 TRMT112 Multifunctional methyltransferase subunit TRM112-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 83.379 83.442 2 0.0016611 96594 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 56.258 46.026 286760000 0 0 0 8350400 19183000 16366000 11682000 20994000 14388000 40723000 31349000 29770000 18616000 26452000 48883000 19084 4920 17394 160069;160070;160071;160072;160073;160074;160075;160076;160077;160078;160079;160080 127497;127498;127499;127500 127499 4 GIPSTRVPSDSAITYR Unmodified 1718.8951 0.89514758 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 55.782 55.838 3 0.0016353 63253 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 36.112 26.012 45666000 0 0 0 4888900 3504400 0 0 0 0 5570300 7742400 9761500 7664500 6533600 0 19085 5262 17395 160081;160082;160083;160084;160085;160086;160087;160088 127501;127502;127503;127504;127505;127506 127501 6 GIPVVEHK Unmodified 877.50215 0.50215205 946;2084 P11388;Q02880 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2-beta no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 26.473 25.495 2 0.03661 27228 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 51.787 18.049 86083000 47042000 0 18282000 0 0 0 0 0 0 3953300 4904700 0 4726000 2569300 4606600 19086 946;2084 17396 160089;160090;160091;160092;160093;160094;160095 127507;127508 127507 2 GIPYTLNGK Unmodified 961.52328 0.52328142 3159 Q86V21 AACS Acetoacetyl-CoA synthetase yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 56.271 49.273 2 0.00067433 64017 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.52 70.91 60193000 17329000 42864000 0 0 0 0 0 0 0 0 0 0 0 0 0 19087 3159 17397 160096;160097 127509;127510 127509 2 GIQEAQVELQK Unmodified 1241.6616 0.66156582 2940 Q6P996 PDXDC1 Pyridoxal-dependent decarboxylase domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 44.954 43.865 2 1.5104E-59 49263 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 191.85 144.77 1097600000 9648200 427750000 0 54224000 35732000 68894000 60768000 54307000 40784000 49324000 60860000 64219000 47724000 53202000 70196000 19088 2940 17398 160098;160099;160100;160101;160102;160103;160104;160105;160106;160107;160108;160109;160110;160111;160112 127511;127512;127513;127514;127515;127516;127517;127518;127519;127520;127521;127522;127523;127524;127525;127526;127527;127528;127529;127530;127531;127532;127533;127534;127535 127512 23 GIQEEMEALVK Oxidation (M) 1261.6224 0.62240312 2613 Q16555 DPYSL2 Dihydropyrimidinase-related protein 2 yes yes 0 1 0 By MS/MS By MS/MS 2.2 0.4 4 1 3 2 51.908 47.047 2 1.7074E-05 57850 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 117.89 96.362 134700000 0 130350000 4353100 0 0 0 0 0 0 0 0 0 0 0 0 19089 2613 17399 160113;160114;160115;160116;160117 127536;127537;127538 127538 4265 3 GIQEEMEALVK Unmodified 1245.6275 0.6274885 2613 Q16555 DPYSL2 Dihydropyrimidinase-related protein 2 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 85.851 80.471 2 5.2302E-05 97358 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 135.71 92.465 1043000000 26404000 1016600000 0 0 0 0 0 0 0 0 0 0 0 0 0 19090 2613 17399 160118;160119;160120 127539;127540;127541 127540 3 GIQEIADSVK Unmodified 1058.5608 0.56078914 144 O00330 PDHX Pyruvate dehydrogenase protein X component, mitochondrial yes yes 0 0 0 By MS/MS 3 0 1 1 59.038 54.218 2 0.026306 66552 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 60.59 6.6244 64141000 0 64141000 0 0 0 0 0 0 0 0 0 0 0 0 0 19091 144 17400 160121 127542 127542 1 GIQFLQEK Unmodified 961.52328 0.52328142 3615 Q92538 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 0 0 0 By MS/MS By MS/MS By matching 2.25 0.433 3 1 1 2 1 63.844 58.16 2 0.0025602 74727 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.62 76.226 98571000 24876000 69634000 4061200 0 0 0 0 0 0 0 0 0 0 0 0 19092 3615 17401 160122;160123;160124;160125 127543;127544;127545 127543 3 GIQNQAEPR Unmodified 1011.5098 0.50975662 354 O43683 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.114 14.276 2 0.0034522 13042 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.302 49.581 54746000 0 0 0 2032900 2997700 3611800 3352200 3043700 1963900 5743400 4690600 7181600 6043700 5161000 8923300 19093 354 17402 160126;160127;160128;160129;160130;160131;160132;160133;160134;160135;160136;160137 127546;127547;127548;127549;127550;127551;127552;127553;127554;127555;127556 127549 10 GIQQATTGVSQETSENPGNK Unmodified 2044.9661 0.96614027 775 P04150 NR3C1 Glucocorticoid receptor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 26 2 2 2 2 3 2 2 2 2 3 2 2 35.923 36.109 2;3 4.9672E-123 39770 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 234.69 191.71 894340000 0 0 0 47168000 45379000 71420000 58345000 75652000 49105000 47530000 75696000 130980000 98652000 98730000 95685000 19094 775 17403 160138;160139;160140;160141;160142;160143;160144;160145;160146;160147;160148;160149;160150;160151;160152;160153;160154;160155;160156;160157;160158;160159;160160;160161;160162;160163 127557;127558;127559;127560;127561;127562;127563;127564;127565;127566;127567;127568;127569;127570;127571;127572 127558 12 GIQSLGVK Unmodified 800.4756 0.47560295 4969 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 41.774 35.88 2 0.013456 46613 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.602 39.05 42000000 6271100 35729000 0 0 0 0 0 0 0 0 0 0 0 0 0 19095 4969 17404 160164;160165 127573 127573 1 GIQVLPDGR Unmodified 953.52943 0.52942943 4779 Q9NZN8 CNOT2 CCR4-NOT transcription complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 49.285 49.514 2 0.0030604 55801 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 91.853 69.722 237060000 0 0 0 0 16157000 19784000 16627000 21013000 13315000 20536000 26522000 23628000 31347000 20172000 27960000 19096 4779 17405 160166;160167;160168;160169;160170;160171;160172;160173;160174;160175;160176 127574;127575;127576;127577;127578;127579;127580;127581;127582;127583;127584;127585;127586;127587;127588;127589 127585 15 GIREPVSVGTPSEGEGLGADGQEHK Unmodified 2505.2096 0.20955844 3252 Q8IX01 SUGP2 SURP and G-patch domain-containing protein 2 yes yes 0 0 1 By MS/MS 2 0 1 1 55.707 51.83 4 0.0010856 64830 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 26.047 19.689 5416600 0 0 5416600 0 0 0 0 0 0 0 0 0 0 0 0 19097 3252 17406 160177 127590 127590 1 GIRHEVININLK Unmodified 1404.8201 0.82013215 1984 P78417 GSTO1 Glutathione S-transferase omega-1 yes yes 0 0 1 By MS/MS 10 0 1 1 54.958 55.598 3 0.0097528 62254 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.502 30.366 7252000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7252000 19098 1984 17407 160178 127591 127591 1 GIRPAPGYPSQPDHTEK Unmodified 1848.9119 0.91186028 4049 Q99707 MTR Methionine synthase yes yes 0 0 1 By MS/MS 2 0 1 1 36.496 30.067 3 5.4693E-05 41970 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.138 67.868 24427000 24427000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19099 4049 17408 160179 127592 127592 1 GISAFPESDNLFK Unmodified 1423.6983 0.69834526 179 O00762 UBE2C Ubiquitin-conjugating enzyme E2 C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81.757 81.403 2 6.4816E-08 93834 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 121.9 110.31 208570000 0 14778000 11363000 4552900 6274600 15529000 9794000 16084000 7901800 22367000 20090000 24093000 9820000 14337000 31588000 19100 179 17409 160180;160181;160182;160183;160184;160185;160186;160187;160188;160189;160190;160191;160192;160193 127593;127594;127595;127596;127597;127598;127599;127600;127601;127602;127603;127604;127605 127596 12 GISAGAVQTAGK Unmodified 1058.572 0.57202253 1497 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes yes 0 0 0 By MS/MS 2 0 1 1 29.517 25.169 2 0.00019197 32904 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.957 61.661 15270000 0 15270000 0 0 0 0 0 0 0 0 0 0 0 0 0 19101 1497 17410 160194 127606 127606 1 GISAQIVSAADK Unmodified 1158.6245 0.62445203 3324 Q8N3P4 VPS8 Vacuolar protein sorting-associated protein 8 homolog yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 58.038 52.696 2 0.019827 68166 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.327 27.354 56854000 0 56854000 0 0 0 0 0 0 0 0 0 0 0 0 0 19102 3324 17411 160195;160196 127607;127608 127607 2 GISCMNTTLSESPFK Oxidation (M) 1686.7593 0.75930731 2505 Q15181 PPA1 Inorganic pyrophosphatase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.36 3.47 6 2 3 1 6 1 1 1 1 68.827 65.701 2 7.5597E-45 80182 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 156.71 149.33 1228200000 49209000 1124400000 18290000 0 0 0 0 0 0 0 10545000 0 0 10241000 15562000 19103 2505 17412 160197;160198;160199;160200;160201;160202;160203;160204;160205;160206;160207 127609;127610;127611;127612;127613;127614;127615;127616;127617;127618;127619;127620;127621 127610 4111 13 GISCMNTTLSESPFK Unmodified 1670.7644 0.76439269 2505 Q15181 PPA1 Inorganic pyrophosphatase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 6.56 3.86 3 1 5 1 2 1 1 1 1 1 1 76.481 74.499 2 2.8717E-80 92741 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 202.16 187.15 3962000000 104070000 3772300000 19700000 0 0 0 0 1539200 0 0 7432000 8862100 0 10369000 37816000 19104 2505 17412 160208;160209;160210;160211;160212;160213;160214;160215;160216 127622;127623;127624;127625;127626;127627;127628;127629 127622 8 GISDLAQHYLMR Oxidation (M) 1418.6976 0.69763375 1570 P49368 CCT3 T-complex protein 1 subunit gamma yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 1 2 2 1 2 2 2 2 2 2 74.875 74.937 2;3 5.3154E-09 86439 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 140.49 122.62 654270000 0 0 0 13299000 15024000 55525000 27522000 47779000 37881000 65481000 58436000 70712000 51354000 43533000 167720000 19105 1570 17413 160217;160218;160219;160220;160221;160222;160223;160224;160225;160226;160227;160228;160229;160230;160231;160232;160233;160234;160235;160236;160237;160238 127630;127631;127632;127633;127634;127635;127636;127637;127638;127639;127640;127641;127642;127643;127644;127645;127646 127644 2510 13 GISDLAQHYLMR Unmodified 1402.7027 0.70271913 1570 P49368 CCT3 T-complex protein 1 subunit gamma yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 12 1 1 2 1 1 2 2 2 78.981 79.14 2;3 0.00022236 90954 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.069 61.18 73106000 0 0 0 0 0 4490400 0 1952700 6725300 4353900 3610600 9049000 0 5098700 37826000 19106 1570 17413 160239;160240;160241;160242;160243;160244;160245;160246;160247;160248;160249;160250 127647;127648 127647 2 GISDLVLK Unmodified 843.50657 0.50656873 1232 P28288 ABCD3 ATP-binding cassette sub-family D member 3 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching 10 0 6 1 1 1 1 1 1 66.755 66.66 2 0.047391 76605 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 47.849 15.378 22777000 0 0 0 4560000 2701700 0 3301100 0 0 3557300 0 0 4485500 4171300 0 19107 1232 17414 160251;160252;160253;160254;160255;160256 127649 127649 1 GISEETTTGVHNLYK Unmodified 1647.8104 0.8104149 1164 P23526 AHCY Adenosylhomocysteinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 1 2 2 2 2 2 2 47.245 47.41 2;3 3.3512E-192 52208 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 257.09 212.77 730810000 0 0 0 34993000 16655000 24479000 16695000 22852000 12352000 39080000 105190000 91906000 25583000 67122000 273910000 19108 1164 17415 160257;160258;160259;160260;160261;160262;160263;160264;160265;160266;160267;160268;160269;160270;160271;160272;160273;160274;160275;160276;160277;160278;160279 127650;127651;127652;127653;127654;127655;127656;127657;127658;127659;127660;127661;127662;127663 127653 14 GISHASSSIVSLAR Unmodified 1383.747 0.74702678 2879 Q6GQQ9 OTUD7B OTU domain-containing protein 7B yes yes 0 0 0 By MS/MS 10 0 1 1 49.887 50.598 3 0.037108 56229 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.088 41.038 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19109 2879 17416 160280 127664 127664 1 GISHVIVDEIHER Unmodified 1502.7841 0.78414057 2152 Q08211 DHX9 ATP-dependent RNA helicase A yes yes 0 0 0 By MS/MS 10 0 1 1 55.562 56.187 3 0.0017466 62969 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.44 35.619 8835900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8835900 19110 2152 17417 160281 127665 127665 1 GISLNPEQWSQLK Unmodified 1498.778 0.77799256 1730 P53999 SUB1 Activated RNA polymerase II transcriptional coactivator p15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.76 2.85 3 1 21 1 2 1 1 1 1 2 2 2 2 2 2 2 2 2 84.268 83.608 2;3 1.6716E-54 105056 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 200.71 179.34 4994800000 291830000 2460900000 37728000 23839000 70482000 95899000 139030000 228580000 176700000 233710000 342490000 166350000 125340000 145910000 456080000 19111 1730 17418 160282;160283;160284;160285;160286;160287;160288;160289;160290;160291;160292;160293;160294;160295;160296;160297;160298;160299;160300;160301;160302;160303;160304;160305;160306 127666;127667;127668;127669;127670;127671;127672;127673;127674;127675;127676;127677;127678;127679;127680;127681;127682;127683;127684;127685;127686 127677 21 GISMSSSK Unmodified 795.37965 0.37965365 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS 2 0 1 1 13.891 10.577 2 0.038396 14059 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.342 56.93 269810000 0 269810000 0 0 0 0 0 0 0 0 0 0 0 0 0 19112 5187 17419 160307 127687 127687 1 GISPVPINLR Unmodified 1064.6342 0.63422886 1630 P50570;Q05193 DNM2;DNM1 Dynamin-2;Dynamin-1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.49 74.554 2 0.0042126 86581 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 73.665 30.795 384800000 0 0 0 24399000 20889000 26891000 31638000 27435000 25166000 29019000 39315000 44437000 29421000 29382000 56813000 19113 1630 17420 160308;160309;160310;160311;160312;160313;160314;160315;160316;160317;160318;160319 127688;127689;127690;127691;127692;127693;127694;127695;127696;127697;127698;127699;127700 127699 13 GISPVVSEHRK Unmodified 1207.6673 0.6673199 4047 Q99700 ATXN2 Ataxin-2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 17.45 17.216 3 0.0042675 16828 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 46.73 35.471 113120000 36945000 0 0 3755500 3982300 5851500 0 5386800 4294300 5636100 8035200 9956500 10355000 8072700 10845000 19114 4047 17421 160320;160321;160322;160323;160324;160325;160326;160327;160328;160329;160330;160331 127701;127702;127703;127704;127705;127706;127707;127708;127709 127702 9 GISQAEIR Unmodified 872.47158 0.4715802 2189 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 25.738 25.934 2 0.016731 27935 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.799 8.9879 75881000 0 0 0 0 0 12018000 12789000 0 7925600 15874000 0 0 0 0 27274000 19115 2189 17422 160332;160333;160334;160335;160336 127710;127711;127712;127713 127710 4 GISQEQMNEFR Oxidation (M) 1353.5983 0.59831364 971 P12814 ACTN1 Alpha-actinin-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.447 31.633 2 0.00037891 34680 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 80.755 57.684 100160000 0 0 0 3431800 3501900 6831600 5493200 3638600 3994200 5476200 9631900 23485000 5500700 9108300 20064000 19116 971 17423 160337;160338;160339;160340;160341;160342;160343;160344;160345;160346;160347;160348 127714;127715;127716;127717;127718;127719;127720;127721;127722;127723;127724;127725;127726 127714 1282 13 GISQEQMNEFR Unmodified 1337.6034 0.60339901 971 P12814 ACTN1 Alpha-actinin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.27 48.442 2 5.0204E-06 54382 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 166.16 136.35 155890000 0 0 0 7324800 5769000 13011000 0 5957200 0 10805000 18379000 15720000 7674900 15441000 55804000 19117 971 17423 160349;160350;160351;160352;160353;160354;160355;160356;160357;160358;160359;160360 127727;127728;127729;127730;127731;127732;127733;127734;127735;127736;127737;127738 127732 12 GISQEQMQEFR Oxidation (M) 1367.614 0.6139637 356 O43707 ACTN4 Alpha-actinin-4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 31.873 31.679 2 1.7954E-47 33615 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 185.81 145.09 424160000 0 43562000 0 19482000 16949000 34931000 15428000 10271000 12390000 24999000 44719000 71930000 21340000 33339000 74819000 19118 356 17424 160361;160362;160363;160364;160365;160366;160367;160368;160369;160370;160371;160372;160373;160374 127739;127740;127741;127742;127743;127744;127745;127746;127747;127748;127749;127750;127751;127752;127753;127754;127755;127756;127757 127745 447 19 GISQEQMQEFR Unmodified 1351.619 0.61904908 356 O43707 ACTN4 Alpha-actinin-4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 49.705 49.404 2 2.2858E-148 54827 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 228.05 165.5 1024000000 0 92284000 0 23727000 17407000 65346000 30081000 30040000 23812000 66109000 131310000 121500000 35982000 76549000 309810000 19119 356 17424 160375;160376;160377;160378;160379;160380;160381;160382;160383;160384;160385;160386;160387;160388 127758;127759;127760;127761;127762;127763;127764;127765;127766;127767;127768;127769;127770;127771;127772;127773;127774 127763 16 GISSQPFPELHCAALK Unmodified 1753.8821 0.88214006 2602 Q16401 PSMD5 26S proteasome non-ATPase regulatory subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 73.047 73.102 3 0.00076999 83301 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 52.823 47.614 163910000 0 0 0 3983800 5868600 17712000 0 11039000 6885400 19077000 15228000 17477000 14327000 15433000 36883000 19120 2602 17425 160389;160390;160391;160392;160393;160394;160395;160396;160397;160398;160399 127775;127776;127777;127778;127779;127780;127781;127782;127783 127781 9 GISSQYSNTEER Unmodified 1369.611 0.61098681 781 P04279 SEMG1 Semenogelin-1;Alpha-inhibin-92;Alpha-inhibin-31;Seminal basic protein yes yes 0 0 0 By MS/MS 10 0 1 1 22.359 22.525 2 2.8637E-05 23504 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 97.456 75.37 8655900 0 0 0 0 0 0 0 8655900 0 0 0 0 0 0 0 19121 781 17426 160400 127784 127784 1 GISVHISNAEPK Unmodified 1250.6619 0.66190017 2242 Q13148 TARDBP TAR DNA-binding protein 43 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.29 6 1 24 3 2 2 2 2 2 2 2 2 2 2 2 2 2 2 42.411 41.581 2;3 9.6442E-08 46238 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 125.3 91.871 3523400000 1425100000 52221000 39932000 54756000 85669000 128010000 171230000 156000000 122570000 209880000 202360000 209730000 141010000 180630000 344310000 19122 2242 17427 160401;160402;160403;160404;160405;160406;160407;160408;160409;160410;160411;160412;160413;160414;160415;160416;160417;160418;160419;160420;160421;160422;160423;160424;160425;160426;160427;160428;160429;160430;160431 127785;127786;127787;127788;127789;127790;127791;127792;127793;127794;127795;127796;127797;127798;127799;127800;127801;127802;127803;127804;127805;127806;127807;127808;127809;127810;127811;127812;127813 127807 24 GITALQADIK Unmodified 1028.5866 0.58660996 3490 Q8TCS8 PNPT1 Polyribonucleotide nucleotidyltransferase 1, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 65.045 59.127 2 0.0050808 75835 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.67 36.544 60098000 0 60098000 0 0 0 0 0 0 0 0 0 0 0 0 0 19123 3490 17428 160432 127814 127814 1 GITEECLK Unmodified 948.45863 0.45863226 4976 Q9UKV3 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 33.742 29.164 2 0.018796 38125 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.029 44.963 112040000 0 112040000 0 0 0 0 0 0 0 0 0 0 0 0 0 19124 4976 17429 160433;160434 127815 127815 1 GITEETQK Unmodified 904.45018 0.45017606 387 O60244 MED14 Mediator of RNA polymerase II transcription subunit 14 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 9.7952 6.4817 2 0.01212 9657 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.64 49.856 16907000 0 16907000 0 0 0 0 0 0 0 0 0 0 0 0 0 19125 387 17430 160435;160436 127816 127816 1 GITEQQK Unmodified 802.41848 0.418482 974 P13010 XRCC5 X-ray repair cross-complementing protein 5 yes yes 0 0 0 By matching By MS/MS 3 0 2 1 1 6.4111 2.918 2 0.03056 4389 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 92.692 35.229 8109400 2449800 5659600 0 0 0 0 0 0 0 0 0 0 0 0 0 19126 974 17431 160437;160438 127817 127817 1 GITFDSGGISIK Unmodified 1193.6292 0.62920306 1240 P28838 LAP3 Cytosol aminopeptidase yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 7.12 3.72 2 1 5 2 1 1 1 1 1 1 77.256 75.958 2 0.00086066 90638 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 109.66 76.401 258560000 0 217950000 9812800 1176700 0 0 0 0 0 0 3715600 5862900 0 2343400 17691000 19127 1240 17432 160439;160440;160441;160442;160443;160444;160445;160446 127818;127819;127820;127821;127822;127823;127824 127821 7 GITGVDLFGTTDAVVK Unmodified 1591.8457 0.84573777 1721 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 85.383 85.45 2 4.8863E-36 99166 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 192.68 157.99 228370000 0 0 0 4251200 11371000 15381000 10801000 12616000 13398000 30732000 26715000 26939000 14153000 24046000 37966000 19128 1721 17433 160447;160448;160449;160450;160451;160452;160453;160454;160455;160456;160457;160458 127825;127826;127827;127828;127829;127830;127831;127832;127833;127834;127835;127836;127837;127838;127839 127836 15 GITGVEDK Unmodified 817.41815 0.41814765 1249 P29401 TKT Transketolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 16.08 16.534 2 0.011504 15324 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.774 37.956 256600000 0 0 0 0 0 0 0 0 0 0 55841000 44752000 0 46739000 109270000 19129 1249 17434 160459;160460;160461;160462 127840;127841;127842 127840 3 GITHYYIESTDESTPAK Unmodified 1910.8898 0.88978743 3163 Q86V87 FAM160B2 Protein FAM160B2 yes yes 0 0 0 By MS/MS 2 0 1 1 52.255 48.334 3 0.001999 60802 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 50.079 35.384 2830600 0 0 2830600 0 0 0 0 0 0 0 0 0 0 0 0 19130 3163 17435 160463 127843;127844 127844 2 GITMATAK Unmodified 791.42112 0.42112454 5187;5201 Q9Y490;Q9Y4G6 TLN1;TLN2 Talin-1;Talin-2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 21.948 22.126 2 0.012884 23420 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 73.616 24.405 121420000 0 0 0 5910000 0 15373000 11626000 9067700 7666100 21135000 20490000 0 0 0 30149000 19131 5187;5201 17436 160464;160465;160466;160467;160468;160469;160470;160471 127845;127846;127847;127848;127849;127850 127845 6 GITMATAK Oxidation (M) 807.41604 0.41603916 5187;5201 Q9Y490;Q9Y4G6 TLN1;TLN2 Talin-1;Talin-2 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 8.6033 8.7216 2 0.013577 6322 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 62.659 32.155 73537000 0 0 0 5919200 6134500 8496300 4699100 2272900 2748200 7257300 12013000 10598000 7052600 0 6346100 19132 5187;5201 17436 160472;160473;160474;160475;160476;160477;160478;160479;160480;160481;160482 127851;127852;127853 127852 6562 3 GITQNALDYMK Oxidation (M) 1268.6071 0.60708741 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 50.868 45.547 2 0.0031706 59043 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.287 62.146 55610000 0 55610000 0 0 0 0 0 0 0 0 0 0 0 0 0 19133 2775 17437 160483;160484 127854 127854 4407 1 GITYDDPIK Unmodified 1020.5128 0.51277632 4941 Q9UJV9 DDX41 Probable ATP-dependent RNA helicase DDX41 yes yes 0 0 0 By MS/MS 2 0 1 1 55.56 49.746 2 0.037805 64335 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.107 12.518 29168000 0 29168000 0 0 0 0 0 0 0 0 0 0 0 0 0 19134 4941 17438 160485 127855 127855 1 GIVDQSQQAYQEAFEISK Unmodified 2039.98 0.97999942 1940 P63104 YWHAZ 14-3-3 protein zeta/delta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.96 3.89 1 16 7 22 3 19 2 2 2 2 1 2 2 2 2 2 1 2 2 82.82 81.054 2;3 8.6526E-277 100256 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 350.73 321.18 20870000000 250520000 19221000000 385900000 4812800 13002000 27044000 5910000 19969000 19340000 69326000 115460000 102480000 7125800 49998000 578120000 19135 1940 17439 160486;160487;160488;160489;160490;160491;160492;160493;160494;160495;160496;160497;160498;160499;160500;160501;160502;160503;160504;160505;160506;160507;160508;160509;160510;160511;160512;160513;160514;160515;160516;160517;160518;160519;160520;160521;160522;160523;160524;160525;160526;160527;160528;160529;160530;160531 127856;127857;127858;127859;127860;127861;127862;127863;127864;127865;127866;127867;127868;127869;127870;127871;127872;127873;127874;127875;127876;127877;127878;127879;127880;127881;127882;127883;127884;127885;127886;127887;127888;127889;127890;127891;127892;127893;127894;127895;127896 127865 36 GIVDQSQQAYQEAFEISKK Unmodified 2168.075 0.074962442 1940 P63104 YWHAZ 14-3-3 protein zeta/delta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 5.57 3.85 3 1 3 1 2 1 1 1 1 79.458 76.853 3 3.513E-111 96970 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 201.96 177.37 266780000 43126000 120280000 18109000 0 0 0 0 0 0 0 25591000 45924000 0 13747000 0 19136 1940 17440 160532;160533;160534;160535;160536;160537;160538 127897;127898;127899;127900;127901;127902;127903;127904;127905 127901 9 GIVDSITGQR Unmodified 1044.5564 0.55637247 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 2 2 1 53.497 53.349 2 0.00056839 60585 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 127.46 91.067 164980000 0 0 0 36430000 17396000 0 31970000 43656000 0 0 0 0 0 35534000 0 19137 1029 17441 160539;160540;160541;160542;160543;160544;160545;160546;160547;160548;160549 127906;127907;127908;127909;127910;127911;127912;127913;127914;127915 127911 7 GIVEDIHCGSMK Oxidation (M) 1360.6115 0.61152086 1655 P51531 SMARCA2 Probable global transcription activator SNF2L2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 6 2 2 2 41.148 36.015 2;3 0.0050772 49591 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.321 51.45 86944000 33150000 18435000 35358000 0 0 0 0 0 0 0 0 0 0 0 0 19138 1655 17442 160550;160551;160552;160553;160554;160555 127916;127917;127918;127919 127917 2661 3 GIVEDIHCGSMK Unmodified 1344.6166 0.61660624 1655 P51531 SMARCA2 Probable global transcription activator SNF2L2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 45.984 45.813 3 0.018868 58386 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 48.568 39.839 55881000 0 0 8334900 0 3275600 0 3141800 5127700 3866500 3661700 4040700 6220400 0 6712300 11500000 19139 1655 17442 160556;160557;160558;160559;160560;160561;160562;160563;160564;160565 127920;127921 127921 2 GIVEESVTGVHR Unmodified 1281.6677 0.66771383 377;3868 O43865;Q96HN2 AHCYL1;AHCYL2 Putative adenosylhomocysteinase 2;Putative adenosylhomocysteinase 3 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 2 2 2 2 1 2 2 2 2 2 2 41.194 41.439 2;3 2.5241E-05 45306 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 121.73 102.95 254220000 0 0 0 10358000 11218000 17985000 16982000 18657000 6556500 23391000 24067000 31501000 16521000 21705000 55283000 19140 377;3868 17443 160566;160567;160568;160569;160570;160571;160572;160573;160574;160575;160576;160577;160578;160579;160580;160581;160582;160583;160584;160585;160586;160587 127922;127923;127924;127925;127926 127924 4 GIVEFASK Unmodified 849.45962 0.45961853 1151 P23246 SFPQ Splicing factor, proline- and glutamine-rich yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 51.845 46.183 2 0.017927 57200 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 89.55 52.963 1499900000 377770000 844010000 278080000 0 0 0 0 0 0 0 0 0 0 0 0 19141 1151 17444 160588;160589;160590;160591 127927;127928;127929 127928 3 GIVEFASKPAAR Unmodified 1244.6877 0.68772099 1151 P23246 SFPQ Splicing factor, proline- and glutamine-rich yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 45.369 45.521 3 0.014903 50989 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 29.303 0.34518 31575000 0 0 0 6949000 3643200 0 4625100 0 0 0 6101600 5274100 0 0 4982400 19142 1151 17445 160592;160593;160594;160595;160596;160597 127930;127931 127930 2 GIVEFSGK Unmodified 835.44397 0.44396847 2508 Q15233 NONO Non-POU domain-containing octamer-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.29 3.67 4 2 11 2 3 1 1 1 1 1 1 1 1 1 1 1 1 43.841 42.296 2 0.005818 47233 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 105.39 72.033 1166000000 67271000 288750000 96476000 0 32489000 71272000 56375000 41998000 39114000 72161000 70536000 77747000 59905000 63922000 128010000 19143 2508 17446 160598;160599;160600;160601;160602;160603;160604;160605;160606;160607;160608;160609;160610;160611;160612;160613;160614 127932;127933;127934;127935;127936;127937;127938;127939;127940;127941;127942;127943;127944;127945;127946 127933 14 GIVEFSGKPAAR Unmodified 1230.6721 0.67207093 2508 Q15233 NONO Non-POU domain-containing octamer-binding protein yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 3 1 1 2 2 1 2 2 2 2 2 2 41.36 41.544 2;3 0.00071172 47059 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 93.649 73.862 312960000 0 0 0 35474000 4593000 2928000 45301000 27764000 1212900 34331000 32547000 45770000 27152000 21961000 33924000 19144 2508 17447 160615;160616;160617;160618;160619;160620;160621;160622;160623;160624;160625;160626;160627;160628;160629;160630;160631;160632;160633;160634;160635;160636 127947;127948;127949;127950;127951;127952;127953;127954;127955;127956;127957;127958;127959;127960;127961;127962;127963;127964 127964 13 GIVEHEEQK Unmodified 1067.5247 0.52473799 4761 Q9NZ63 C9orf78 Uncharacterized protein C9orf78 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 8.903 8.0305 2 8.4969E-09 9746 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 186.3 138.13 204130000 7666000 97298000 68559000 0 1030100 0 1880500 876010 1229600 1936500 6731900 7406200 0 2018300 7492800 19145 4761 17448 160637;160638;160639;160640;160641;160642;160643;160644;160645;160646;160647;160648;160649 127965;127966;127967;127968;127969;127970;127971 127968 7 GIVESSVTSAVSGK Unmodified 1319.6933 0.69325988 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 55.98 56.06 2 0.00075333 63254 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 78.692 67.541 83119000 0 0 0 4671100 4567300 5773700 8017800 10253000 6630500 6930400 9863400 11905000 7771400 6735900 0 19146 3443 17449 160650;160651;160652;160653;160654;160655;160656;160657;160658;160659;160660 127972;127973;127974;127975;127976;127977;127978;127979 127975 7 GIVLLEELLPK Unmodified 1222.7537 0.75367529 5161 Q9Y3D6 FIS1 Mitochondrial fission 1 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.12 3.72 4 2 10 2 3 1 1 1 1 1 1 1 1 1 1 1 98.095 96.483 2 0.00045477 118557 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.52 85.734 94925000 46151000 20968000 1829700 0 604580 633470 999380 1140200 798060 4063900 3331700 1521100 0 1791500 11092000 19147 5161 17450 160661;160662;160663;160664;160665;160666;160667;160668;160669;160670;160671;160672;160673;160674;160675;160676 127980;127981;127982;127983;127984;127985;127986;127987;127988;127989;127990 127982 10 GIVNEQFLLQR Unmodified 1315.7248 0.72483478 1591 P49748 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.959 78.018 2 2.0789E-05 89646 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 146.81 119.68 200050000 0 0 0 5913800 8378800 14882000 9934700 16151000 15206000 22682000 27463000 21219000 10556000 12554000 35109000 19148 1591 17451 160677;160678;160679;160680;160681;160682;160683;160684;160685;160686;160687;160688 127991;127992;127993;127994;127995;127996;127997;127998;127999;128000;128001;128002;128003 127995 11 GIVSYTEK Unmodified 895.4651 0.46509784 2685 Q4J6C6 PREPL Prolyl endopeptidase-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 4.83 3.67 3 1 2 1 2 1 1 1 33.008 30.01 2 0.017927 39238 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.55 48.048 393000000 9805500 359680000 8883000 0 0 0 0 0 0 0 0 0 0 3734600 10892000 19149 2685 17452 160689;160690;160691;160692;160693;160694 128004;128005;128006 128004 3 GIVYDTGGLSIK Unmodified 1221.6605 0.66050319 3417 Q8NDH3 NPEPL1 Probable aminopeptidase NPEPL1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 2 1 1 1 1 74.519 69.557 2 0.0040321 85726 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 94.692 68.955 22898000 8569300 8299900 6028500 0 0 0 0 0 0 0 0 0 0 0 0 19150 3417 17453 160695;160696;160697 128007;128008;128009 128009 3 GIWLEAGK Unmodified 872.4756 0.47560295 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 57.33 57.462 2 0.042322 65042 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 49.65 28.79 114630000 0 0 0 5702900 0 19800000 9107400 0 7849400 16688000 16859000 17212000 8129900 13279000 0 19151 5187 17454 160698;160699;160700;160701;160702;160703;160704;160705;160706 128010 128010 1 GIYAMASR Unmodified 867.42727 0.42727255 4043 Q99661 KIF2C Kinesin-like protein KIF2C yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 35.53 35.686 2 0.018283 38128 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 64.567 43.583 96808000 0 0 0 4733500 5693500 6372900 6995700 8068300 5801700 7326900 0 8620900 11442000 8856400 22896000 19152 4043 17455 160707;160708;160709;160710;160711;160712;160713;160714;160715;160716;160717 128011;128012;128013;128014;128015;128016;128017 128014 7 GIYAVGDVCGK Unmodified 1137.5488 0.54884425 724 P00390 GSR Glutathione reductase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 5 3.56 1 1 1 2 1 51.199 47.88 2 0.01838 53780 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.579 30.493 457500000 0 447410000 0 0 0 0 0 0 0 0 0 0 0 0 10094000 19153 724 17456 160718;160719;160720 128018;128019 128019 1 GIYAYGFEK Unmodified 1046.5073 0.50729701 1816;1400;2396 P38919;P60842;Q14240 EIF4A3;EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed;Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59.714 58.608 2 0.0034522 66188 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 94.302 69.408 2760500000 74022000 91248000 28419000 93501000 107780000 302990000 160280000 148580000 118470000 264660000 272000000 285870000 218060000 183570000 411060000 19154 1400;1816;2396 17457 160721;160722;160723;160724;160725;160726;160727;160728;160729;160730;160731;160732;160733;160734;160735 128020;128021;128022;128023;128024;128025;128026;128027;128028;128029;128030;128031;128032;128033;128034;128035;128036;128037;128038;128039;128040;128041 128028 22 GIYFADMVSK Unmodified 1129.5478 0.54778161 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.86 3.4 2 2 10 2 1 1 1 1 1 1 1 1 1 1 1 1 76.61 75.514 2 0.0099927 90681 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 75.378 51.95 612260000 334050000 17302000 0 0 12893000 18310000 18027000 18191000 0 28065000 29204000 33046000 16919000 24969000 61281000 19155 894 17458 160736;160737;160738;160739;160740;160741;160742;160743;160744;160745;160746;160747;160748;160749 128042;128043;128044;128045;128046;128047;128048;128049;128050;128051 128045 9 GIYFADMVSK Oxidation (M) 1145.5427 0.54269624 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.56 3.86 3 1 5 1 2 1 1 1 1 1 1 60.055 57.61 2 0.013465 73630 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.371 41.241 376890000 111930000 130810000 48310000 0 12748000 0 17372000 0 0 0 19253000 21574000 0 14889000 0 19156 894 17458 160750;160751;160752;160753;160754;160755;160756;160757;160758 128052;128053;128054;128055;128056;128057;128058;128059 128054 1148 8 GIYPHEPK Unmodified 939.48142 0.48141661 167 O00541 PES1 Pescadillo homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 21.95 21.78 2 0.015495 21355 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 68.787 43.168 214670000 0 0 24374000 16418000 0 24357000 0 17689000 21465000 31249000 27307000 0 29189000 22623000 0 19157 167 17459 160759;160760;160761;160762;160763;160764;160765;160766;160767 128060;128061;128062;128063;128064;128065;128066;128067;128068 128066 8 GIYPSETFTR Unmodified 1169.5717 0.57168818 2261 Q13257 MAD2L1 Mitotic spindle assembly checkpoint protein MAD2A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 56.022 56.105 2 0.0046058 63666 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 72.23 52.974 215770000 0 0 0 8650200 11290000 13508000 13530000 16522000 10187000 21163000 30499000 0 15543000 22357000 52525000 19158 2261 17460 160768;160769;160770;160771;160772;160773;160774;160775;160776;160777;160778 128069;128070;128071;128072;128073;128074;128075;128076;128077 128073 9 GIYQSLEGAVQAGQLK Unmodified 1660.8784 0.87843489 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS 2 0 1 1 86.786 78.655 2 0.00059369 102510 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.03 61.143 7358200 7358200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19159 2501 17461 160779 128078 128078 1 GIYVIQAPK Unmodified 987.57532 0.57531699 2838 Q63HN8 RNF213 E3 ubiquitin-protein ligase RNF213 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 58.774 58.982 2 0.029013 66253 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.756 33.974 26411000 0 0 0 0 1589600 0 1393700 0 0 3130300 2863800 2621500 3747000 4031900 7033700 19160 2838 17462 160780;160781;160782;160783;160784;160785;160786;160787 128079 128079 1 GIYVTRVSEGGPAEIAGLQIGDK Unmodified 2329.2278 0.22777469 225 O14907 TAX1BP3 Tax1-binding protein 3 yes yes 0 0 1 By MS/MS 2 0 1 1 86.402 78.271 3 0.0023179 102018 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 39.693 31.505 18799000 18799000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19161 225 17463 160788 128080 128080 1 GKEDEGEEAASPMLQIQR Unmodified 1986.9317 0.93166902 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.073 56.199 3 0.00012159 63529 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.764 48.563 135310000 0 0 0 7501200 7795500 8815800 7587600 12294000 6264100 12008000 13562000 13453000 12831000 11195000 22007000 19162 2392 17464 160789;160790;160791;160792;160793;160794;160795;160796;160797;160798;160799;160800 128081;128082;128083;128084;128085;128086 128085 6 GKEDEGEEAASPMLQIQR Oxidation (M) 2002.9266 0.92658365 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 1 1 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 44.014 44.127 3 0.00011747 48933 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 56.819 52.868 55888000 0 0 0 0 6068500 0 10773000 0 13342000 0 0 25704000 0 0 0 19163 2392 17464 160801;160802;160803;160804 128087;128088;128089 128088 3906 3 GKEETEGFK Unmodified 1023.4873 0.48728985 2916 Q6P1J9 CDC73 Parafibromin yes yes 0 0 1 By MS/MS 3 0 1 1 10.948 7.5755 2 0.0050329 9922 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 133.13 96.949 13281000 0 13281000 0 0 0 0 0 0 0 0 0 0 0 0 0 19164 2916 17465 160805 128090 128090 0 GKFEDMAK Unmodified 924.4375 0.43750288 883;1161 P09429;B2RPK0;P23497 HMGB1;HMGB1P1;SP100 High mobility group protein B1;Putative high mobility group protein B1-like 1;Nuclear autoantigen Sp-100 no no 0 0 1 By MS/MS By MS/MS By matching 2.25 0.433 3 1 1 2 1 23.419 19.436 2 0.015331 26225 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.19 79.064 497800000 185250000 312050000 496280 0 0 0 0 0 0 0 0 0 0 0 0 19165 883;1161 17466 160806;160807;160808;160809 128091;128092 128091 1 GKIEEDSEVLMMIK Oxidation (M) 1636.8052 0.80519487 442 O60888 CUTA Protein CutA yes yes 0 1 1 By MS/MS 2 0 1 1 78.614 70.483 3 0.0075286 92235 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.527 40.803 15381000 15381000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19166 442 17467 160810 128093 128093 566;567 1 GKIEEDSEVLMMIK 2 Oxidation (M) 1652.8001 0.80010949 442 O60888 CUTA Protein CutA yes yes 0 2 1 By MS/MS 2 0 1 1 65.297 61.544 3 0.036637 76334 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 62.68 54.897 11563000 0 0 11563000 0 0 0 0 0 0 0 0 0 0 0 0 19167 442 17467 160811 128094 128094 566;567 1 GKIEEVHLPVEK Unmodified 1376.7664 0.76636524 423 O60678 PRMT3 Protein arginine N-methyltransferase 3 yes yes 0 0 1 By MS/MS 2 0 1 1 59.09 50.864 3 0.011961 69240 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.412 56.059 18090000 18090000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19168 423 17468 160812 128095 128095 0 GKLEEQRPER Unmodified 1240.6524 0.65239812 984 P13693 TPT1 Translationally-controlled tumor protein yes yes 0 0 2 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 7.4403 7.5786 3 0.0046972 6169 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 123.63 97.613 183410000 0 0 0 5507400 2578700 0 6042500 6382700 2202800 0 66321000 32286000 6621500 16898000 38572000 19169 984 17469 160813;160814;160815;160816;160817;160818;160819;160820;160821;160822 128096;128097 128097 2 GKPAAPGGAGNTGTK Unmodified 1282.663 0.6629628 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 6.9007 6.735 2;3 1.3073E-28 5104 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 122.56 117.34 221150000 9648300 0 0 12235000 13032000 10770000 14993000 14803000 13646000 19104000 32725000 16415000 19368000 20509000 23898000 19170 2361 17470 160823;160824;160825;160826;160827;160828;160829;160830;160831;160832;160833;160834;160835 128098;128099;128100;128101;128102;128103;128104;128105;128106;128107;128108;128109;128110 128104 13 GKPDLNTALPVR Unmodified 1279.7248 0.72483478 707 O95983 MBD3 Methyl-CpG-binding domain protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 51.298 51.32 3 1.7455E-05 57097 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.326 68.194 77426000 0 0 0 9402800 11506000 14155000 0 0 0 0 0 18494000 12465000 11403000 0 19171 707 17471 160836;160837;160838;160839;160840;160841;160842;160843 128111;128112;128113;128114;128115;128116;128117;128118 128116 8 GKPDLNTTLPIR Unmodified 1323.751 0.75104953 4832 Q9UBB5 MBD2 Methyl-CpG-binding domain protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 57.436 57.548 3 0.00032225 64614 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 64.121 40.895 106500000 0 0 0 0 9036800 0 17809000 12874000 6967800 17468000 13719000 0 16045000 12582000 0 19172 4832 17472 160844;160845;160846;160847;160848;160849;160850;160851 128119;128120;128121;128122;128123;128124;128125 128123 5 GKPEDVMPSVK Unmodified 1185.6064 0.60635913 188 O14562 UBFD1 Ubiquitin domain-containing protein UBFD1 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 40.816 35.939 2 0.0051299 47131 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.23 94.607 139260000 0 139260000 0 0 0 0 0 0 0 0 0 0 0 0 0 19173 188 17473 160852;160853 128126 128126 1 GKPEDVMPSVK Oxidation (M) 1201.6013 0.60127375 188 O14562 UBFD1 Ubiquitin domain-containing protein UBFD1 yes yes 0 1 1 By MS/MS 3 0 2 2 21.636 17.779 3 0.012393 22502 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 53.569 36.626 181540000 0 181540000 0 0 0 0 0 0 0 0 0 0 0 0 0 19174 188 17473 160854;160855 128127;128128 128128 258 2 GKPGFQGQSSSQAQQVIK Unmodified 1873.9646 0.96462413 4997 Q9ULJ3 ZBTB21 Zinc finger and BTB domain-containing protein 21 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 35.601 35.734 3 0.0053305 38415 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 33.36 27.456 67291000 0 0 0 6030400 4302300 4893100 4204100 5536900 0 9371200 7480400 11212000 5170900 9089500 0 19175 4997 17474 160856;160857;160858;160859;160860;160861;160862;160863;160864;160865 128129;128130 128129 2 GKPLALVEEIR Unmodified 1223.7238 0.72377215 4125 Q9BSD7 NTPCR Cancer-related nucleoside-triphosphatase yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 66.287 66.619 3 0.046795 75549 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.68 35.375 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19176 4125 17475 160866;160867 128131;128132 128132 2 GKPLPEYHVR Unmodified 1194.6509 0.65094155 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.815 27.012 3 0.0037076 28888 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 68.657 60.247 622080000 0 0 0 31134000 30027000 33777000 38880000 29550000 26108000 55533000 84695000 114980000 56495000 39705000 81197000 19177 1986 17476 160868;160869;160870;160871;160872;160873;160874;160875;160876;160877;160878;160879 128133;128134;128135;128136;128137;128138;128139;128140;128141;128142;128143;128144;128145;128146 128140 6 GKPPDVSTEAFLTNLSIQSK Unmodified 2131.1161 0.11609898 3631 Q92576 PHF3 PHD finger protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 82.392 82.478 3 6.7127E-15 95205 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.602 56.076 49128000 0 0 0 0 2450800 5424300 0 6906100 0 9837400 6213300 6168500 0 0 12127000 19178 3631 17477 160880;160881;160882;160883;160884;160885;160886;160887 128147;128148;128149;128150;128151;128152;128153;128154;128155;128156 128149 10 GKPPEADGVDR Unmodified 1139.5571 0.55710075 2136 Q07157 TJP1 Tight junction protein ZO-1 yes yes 0 0 1 By MS/MS By matching 10 0 2 1 1 9.1919 9.5162 3 0.026661 7804 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 42.095 27.064 3780700 0 0 0 0 0 0 0 0 0 0 3249200 0 0 531480 0 19179 2136 17478 160888;160889 128157 128157 0 GKPPEADGVDRSFGEK Unmodified 1687.8166 0.81656291 2136 Q07157 TJP1 Tight junction protein ZO-1 yes yes 0 0 2 By MS/MS 2 0 1 1 33.89 30.584 3 0.00020908 38650 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 95.57 72.767 26915000 0 0 26915000 0 0 0 0 0 0 0 0 0 0 0 0 19180 2136 17479 160890 128158 128158 1 GKPPPLLPSVLGPAGGDR Unmodified 1726.973 0.97300397 3276 Q8IY67 RAVER1 Ribonucleoprotein PTB-binding 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.846 77.905 3 6.7739E-08 90009 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 82.449 79.122 229940000 0 0 0 10029000 9291700 16783000 17936000 23059000 15873000 16187000 20250000 32606000 12597000 17871000 37459000 19181 3276 17480 160891;160892;160893;160894;160895;160896;160897;160898;160899;160900;160901;160902 128159;128160;128161;128162;128163;128164;128165;128166;128167;128168;128169;128170 128164 12 GKPVGLVGVTELSDAQK Unmodified 1696.9359 0.93594977 3251 Q8IWZ8 SUGP1 SURP and G-patch domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 67.321 65.641 3 6.3263E-07 82525 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 72.433 65.852 112430000 45998000 0 12659000 0 9744900 10325000 0 12038000 8379900 0 0 0 13281000 0 0 19182 3251 17481 160903;160904;160905;160906;160907;160908;160909 128171;128172;128173;128174;128175;128176;128177;128178;128179;128180 128178 7 GKPVLELPERK Unmodified 1264.7503 0.75032125 2411 Q14527 HLTF Helicase-like transcription factor yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 1 2 2 1 1 1 1 39.472 39.67 3 0.0027072 43770 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 100.93 90.879 1793100000 0 0 0 100830000 83800000 132170000 143610000 154570000 136450000 170250000 207040000 210140000 154780000 138020000 161480000 19183 2411 17482 160910;160911;160912;160913;160914;160915;160916;160917;160918;160919;160920;160921;160922;160923 128181;128182;128183;128184;128185;128186;128187;128188;128189;128190;128191 128186 5 GKVEEVELPVEK Unmodified 1354.7344 0.73439641 4069 Q99873;Q9NR22 PRMT1;PRMT8 Protein arginine N-methyltransferase 1;Protein arginine N-methyltransferase 8 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.23 3.79 6 2 5 2 4 2 1 1 1 1 1 55.683 51.576 2;3 1.8526E-05 56299 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 77.644 54.727 836060000 123530000 598090000 37639000 0 10538000 0 0 0 0 0 0 0 0 19253000 47010000 19184 4069 17483 160924;160925;160926;160927;160928;160929;160930;160931;160932;160933;160934;160935;160936 128192;128193;128194;128195;128196;128197;128198;128199;128200;128201;128202;128203;128204 128203 11 GLAAALLLCQNK Unmodified 1270.7067 0.70674187 312 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.887 79.95 2 9.7794E-05 92511 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 88.294 71.623 33725000 0 0 0 1233500 1085700 0 1849400 1886100 3216100 3533800 2964500 5175200 3608400 3059700 6112700 19185 312 17484 160937;160938;160939;160940;160941;160942;160943;160944;160945;160946;160947 128205;128206;128207;128208;128209;128210;128211;128212;128213;128214 128209 10 GLAAEDSGGDSK Unmodified 1105.4887 0.48874641 1435 P41227 NAA10 N-alpha-acetyltransferase 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.42 3.82 2 3 1 13 2 4 1 1 1 1 1 1 1 1 2 1 1 1 20.401 20.059 2 2.2568E-15 10285 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 150.35 126.92 2398700000 50361000 114230000 0 15317000 30617000 22148000 168920000 236250000 161480000 231170000 682790000 679800000 2958800 2660800 0 19186 1435 17485 160948;160949;160950;160951;160952;160953;160954;160955;160956;160957;160958;160959;160960;160961;160962;160963;160964;160965;160966 128215;128216;128217;128218;128219;128220;128221;128222;128223;128224;128225;128226;128227;128228;128229;128230;128231;128232;128233;128234;128235;128236;128237;128238 128222 23 GLAAEDSGGDSKDLSEVSETTESTDVK Unmodified 2726.2254 0.22538725 1435 P41227 NAA10 N-alpha-acetyltransferase 10 yes yes 0 0 1 By MS/MS 10 0 1 1 59.281 59.801 3 7.5626E-06 67997 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 35.016 32.254 4925200 0 0 0 0 0 0 0 0 0 0 0 4925200 0 0 0 19187 1435 17486 160967 128239 128239 1 GLAAGDAIAEIR Unmodified 1155.6248 0.62478638 4190 Q9BVJ7 DUSP23 Dual specificity protein phosphatase 23 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.627 66.776 2 0.0018775 76874 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 77.379 46.305 65551000 0 0 0 0 4258000 6354800 5532700 5346900 4087600 7280500 8517500 9949000 6449800 0 7773900 19188 4190 17487 160968;160969;160970;160971;160972;160973;160974;160975;160976;160977;160978;160979 128240;128241;128242;128243;128244;128245;128246;128247;128248;128249;128250 128247 11 GLAAGDAIAEIRR Unmodified 1311.7259 0.72589741 4190 Q9BVJ7 DUSP23 Dual specificity protein phosphatase 23 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 59.48 59.647 3 0.00027898 67863 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 69.03 50.894 97532000 0 0 0 6402500 0 7103600 9252800 8640300 4827100 7312500 9419100 17754000 7513200 6690400 12617000 19189 4190 17488 160980;160981;160982;160983;160984;160985;160986;160987;160988;160989;160990 128251;128252;128253;128254;128255;128256 128252 5 GLAAGSAETLPANFR Unmodified 1473.7576 0.75759147 2239 Q13136 PPFIA1 Liprin-alpha-1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.509 68.587 2 1.042E-22 78529 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 118.28 102.65 148850000 0 0 0 8338600 9560800 11022000 11930000 8853500 9009400 18423000 13539000 15874000 13973000 10594000 17729000 19190 2239 17489 160991;160992;160993;160994;160995;160996;160997;160998;160999;161000;161001;161002 128257;128258;128259;128260;128261;128262;128263;128264;128265;128266;128267;128268;128269 128259 13 GLAAHYFFPR Unmodified 1177.6033 0.60326308 128 O00203 AP3B1 AP-3 complex subunit beta-1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 68.199 68.373 3 0.0040435 77422 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.756 47.453 32083000 0 0 0 0 0 4692700 2086000 2591300 3025700 2282300 0 0 3190200 0 14215000 19191 128 17490 161003;161004;161005;161006;161007;161008;161009 128270;128271;128272 128271 3 GLAAITMDK Oxidation (M) 934.47937 0.4793677 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 36.085 36.201 2 0.0055574 39768 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 69.628 33.748 24238000 0 0 0 0 0 0 8971400 8380200 6886800 0 0 0 0 0 0 19192 3023 17491 161010;161011;161012 128273;128274;128275 128273 4627 3 GLAAITMDK Unmodified 918.48445 0.48445308 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By MS/MS 10 0 1 1 50.65 50.945 2 0.031046 57446 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 47.916 5.5195 32337000 0 0 0 0 0 0 0 0 0 0 0 0 32337000 0 0 19193 3023 17491 161013 128276 128276 1 GLAFQQPGR Unmodified 972.51411 0.51411372 2132 Q07002 CDK18 Cyclin-dependent kinase 18 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.551 42.727 2 0.0051638 48571 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 81.635 51.828 128520000 0 0 0 7160700 8807300 9643800 10137000 10277000 8108200 11905000 13099000 13889000 12152000 7476600 15864000 19194 2132 17492 161014;161015;161016;161017;161018;161019;161020;161021;161022;161023;161024;161025 128277;128278;128279;128280;128281;128282;128283;128284;128285;128286 128285 6 GLAGAVSELLR Unmodified 1084.6241 0.6240581 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 83.86 83.966 2 4.5403E-05 97180 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 116.05 77.088 89887000 0 0 0 0 3840600 8789500 6018000 4695300 5705900 14523000 7072000 6808500 4457300 4868000 23109000 19195 5187 17493 161026;161027;161028;161029;161030;161031;161032;161033;161034;161035;161036 128287;128288;128289;128290;128291;128292;128293;128294;128295;128296 128288 10 GLAGLGDVAEVRK Unmodified 1283.7197 0.7197494 939 P11216 PYGB Glycogen phosphorylase, brain form yes yes 0 0 1 By matching By matching By MS/MS 10 0 3 1 1 1 56.625 57.083 3 0.023548 64086 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 28.523 13.829 15327000 0 0 0 0 0 0 0 0 0 0 0 3249000 0 3665800 8412600 19196 939 17494 161037;161038;161039 128297 128297 1 GLAGPAASYGPYTR Unmodified 1379.6834 0.68336389 1801 P58012 FOXL2 Forkhead box protein L2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 55.108 55.467 2 0.0020529 62743 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 52.391 32.4 43019000 0 0 0 0 0 0 13029000 0 0 0 0 29990000 0 0 0 19197 1801 17495 161040;161041 128298 128298 1 GLAGPPASPGK Unmodified 950.51853 0.5185304 4802 Q9P206 KIAA1522 Uncharacterized protein KIAA1522 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 27.492 26.676 2 0.00047061 28653 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 84.213 52.277 415380000 63792000 53625000 0 13469000 22285000 27005000 22632000 19664000 21776000 30520000 29774000 32597000 29835000 22200000 26203000 19198 4802 17496 161042;161043;161044;161045;161046;161047;161048;161049;161050;161051;161052;161053;161054;161055;161056 128299;128300;128301;128302;128303;128304;128305;128306;128307;128308;128309;128310;128311 128306 12 GLAITFVSDENDAK Unmodified 1478.7253 0.72528829 2347;118 O00148;Q13838 DDX39A;DDX39B ATP-dependent RNA helicase DDX39A;Spliceosome RNA helicase DDX39B no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.86 3.88 1 9 5 13 5 7 3 1 1 1 1 1 1 1 2 1 1 1 1 76.555 74.888 2 1.7844E-177 86562 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 225.22 191.84 2931100000 496900000 1816000000 80291000 8496300 18917000 65659000 31811000 21663000 31212000 77455000 63183000 64740000 29900000 41238000 83597000 19199 118;2347 17497 161057;161058;161059;161060;161061;161062;161063;161064;161065;161066;161067;161068;161069;161070;161071;161072;161073;161074;161075;161076;161077;161078;161079;161080;161081;161082;161083;161084 128312;128313;128314;128315;128316;128317;128318;128319;128320;128321;128322;128323;128324;128325;128326;128327;128328;128329;128330;128331;128332;128333;128334;128335;128336;128337;128338;128339;128340;128341;128342;128343;128344;128345;128346;128347;128348 128338 37 GLALDLEDGNFLK Unmodified 1403.7296 0.72964538 2797 Q5TFE4 NT5DC1 5'-nucleotidase domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.43 3.54 4 1 2 1 3 1 1 1 90.351 87.032 2 9.0305E-14 109310 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.68 88.989 402350000 37787000 346000000 10422000 0 0 0 0 0 0 0 1312600 0 0 0 6827000 19200 2797 17498 161085;161086;161087;161088;161089;161090;161091 128349;128350;128351;128352;128353;128354;128355 128349 7 GLALSNSDVIR Unmodified 1143.6248 0.62478638 5235 Q9Y5K5 UCHL5 Ubiquitin carboxyl-terminal hydrolase isozyme L5 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 59.513 59.695 2 0.0010962 67949 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 112.41 65.329 226050000 0 0 0 0 9689000 18602000 16734000 0 11998000 23674000 34628000 26427000 17487000 19864000 46946000 19201 5235 17499 161092;161093;161094;161095;161096;161097;161098;161099;161100;161101 128356;128357;128358;128359;128360;128361;128362;128363;128364 128361 1 GLALTAAAIK Unmodified 927.57532 0.57531699 3517 Q8TEQ0 SNX29 Sorting nexin-29 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 63.129 63.295 2 0.0077624 71339 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.679 24.978 108260000 0 0 0 0 7489600 9467200 9822300 9984100 8014100 9676100 10953000 9807400 11134000 10825000 11087000 19202 3517 17500 161102;161103;161104;161105;161106;161107;161108;161109;161110;161111;161112 128365;128366;128367;128368;128369;128370;128371;128372;128373;128374 128368 10 GLALVQVK Unmodified 826.52764 0.52763852 3657 Q92766 RREB1 Ras-responsive element-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.367 56.492 2 0.036538 65563 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 88.734 36.051 264700000 0 0 0 21831000 22147000 17029000 20819000 25362000 17915000 22262000 22436000 22418000 26142000 22457000 23885000 19203 3657 17501 161113;161114;161115;161116;161117;161118;161119;161120;161121;161122;161123;161124 128375;128376 128376 1 GLANHVVVGSVSCETK Unmodified 1655.8301 0.83010449 3008 Q6ZS17 FAM65A Protein FAM65A yes yes 0 0 0 By MS/MS 2 0 1 1 54.64 46.531 3 2.2963E-31 63916 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 127.57 123.51 83687000 83687000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19204 3008 17502 161125 128377;128378;128379 128378 3 GLANPEPAPEPK Unmodified 1218.6245 0.62445203 242 O15027 SEC16A Protein transport protein Sec16A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 34.746 34.533 2 0.00021328 36957 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 103.26 76.001 320240000 0 8060600 0 16563000 15540000 20109000 21842000 19590000 16931000 27157000 40450000 33746000 30920000 26569000 42757000 19205 242 17503 161126;161127;161128;161129;161130;161131;161132;161133;161134;161135;161136;161137;161138 128380;128381;128382;128383;128384;128385;128386;128387;128388;128389;128390;128391;128392;128393 128389 14 GLAPDLPEDLYHLIK Unmodified 1692.9087 0.90867238 1887 P62277 RPS13 40S ribosomal protein S13 yes yes 0 0 0 By MS/MS By MS/MS 2.17 0.373 5 1 2 4 97.797 92.167 2;3 4.451E-07 115519 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 103.76 84.183 936760000 505170000 431590000 0 0 0 0 0 0 0 0 0 0 0 0 0 19206 1887 17504 161139;161140;161141;161142;161143;161144 128394;128395;128396;128397;128398;128399 128398 4 GLAPEVADR Unmodified 926.48214 0.48214489 961 P12081;P49590 HARS;HARS2 Histidine--tRNA ligase, cytoplasmic;Probable histidine--tRNA ligase, mitochondrial yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 34.325 34.558 2 0.012004 36792 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 61.962 23.171 94184000 0 0 0 11279000 0 0 5365200 6893800 0 0 23580000 20456000 10351000 16259000 0 19207 961 17505 161145;161146;161147;161148;161149;161150;161151 128400;128401;128402;128403;128404;128405;128406;128407;128408 128403 9 GLAPNQESHLQVPEK Unmodified 1645.8424 0.84238373 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 46.462 45.625 3 0.0001053 51098 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 70.529 44.399 302220000 0 49888000 8550100 10508000 12374000 13063000 12749000 14642000 13724000 22349000 36227000 26672000 16532000 34670000 30269000 19208 645 17506 161152;161153;161154;161155;161156;161157;161158;161159;161160;161161;161162;161163;161164;161165;161166 128409;128410;128411;128412;128413;128414;128415;128416;128417;128418;128419;128420;128421;128422;128423;128424;128425 128422 17 GLAPNTPGK Unmodified 853.46577 0.46576654 350 O43663 PRC1 Protein regulator of cytokinesis 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 20.359 20.45 2 0.048015 21292 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 42.599 21.062 40286000 0 0 0 0 14641000 0 0 7143000 10271000 0 0 0 0 8231200 0 19209 350 17507 161167;161168;161169;161170 128426 128426 1 GLAPRAEASPSSAAVSSLIEK Unmodified 2040.0851 0.085133198 2024 P98174 FGD1 FYVE, RhoGEF and PH domain-containing protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 77.901 69.77 3 9.896E-09 91803 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.703 66.045 24145000 24145000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19210 2024 17508 161171 128427 128427 1 GLATFCLDK Unmodified 1023.5059 0.5059168 262;135 O15173;O00264 PGRMC2;PGRMC1 Membrane-associated progesterone receptor component 2;Membrane-associated progesterone receptor component 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.194 64.172 2 0.0051376 73334 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 82.452 28.898 146080000 0 0 0 12238000 20392000 16673000 16295000 14804000 13485000 22071000 0 30119000 0 0 0 19211 262;135 17509 161172;161173;161174;161175;161176;161177;161178;161179;161180;161181;161182;161183 128428;128429;128430;128431;128432;128433;128434;128435;128436;128437;128438;128439;128440 128435 13 GLATSLQNDLQEVPK Unmodified 1611.8468 0.84680041 3301 Q8N0X7 SPG20 Spartin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 79.856 79.139 2 3.6393E-41 98461 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 176.8 150.91 906100000 0 462500000 5502100 4171400 24791000 25104000 18220000 42049000 33545000 80818000 61025000 80819000 23891000 43660000 0 19212 3301 17510 161184;161185;161186;161187;161188;161189;161190;161191;161192;161193;161194;161195;161196;161197 128441;128442;128443;128444;128445;128446;128447;128448;128449;128450;128451;128452;128453 128444 13 GLAVFISDIR Unmodified 1089.6182 0.61824444 689;613 O94973;O95782 AP2A2;AP2A1 AP-2 complex subunit alpha-2;AP-2 complex subunit alpha-1 no no 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 84.454 84.562 2 0.0095404 97638 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.59 30.987 10427000 0 0 0 0 0 6090400 0 0 0 0 0 0 0 0 4336200 19213 613;689 17511 161198;161199 128454 128454 1 GLAYIQSR Unmodified 906.49232 0.49231565 4656 Q9NUY8 TBC1D23 TBC1 domain family member 23 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 39.404 39.705 2 0.023017 44245 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 60.682 38.19 26290000 0 0 0 0 0 3835400 3150700 0 0 4771600 4080600 0 3431300 0 7020700 19214 4656 17512 161200;161201;161202;161203;161204;161205 128455;128456 128455 2 GLAYVEYENESQASQAVMK Oxidation (M) 2131.9732 0.97319949 2475 Q15020 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes yes 0 1 0 By MS/MS 2 0 1 1 68.093 62.194 3 5.1249E-05 79294 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.105 63.542 94258000 0 94258000 0 0 0 0 0 0 0 0 0 0 0 0 0 19215 2475 17513 161206 128457 128457 4078 1 GLAYVEYENESQASQAVMK Unmodified 2115.9783 0.97828487 2475 Q15020 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 5.82 3.83 4 2 5 4 2 1 1 1 1 1 73.546 71.545 2;3 3.629E-07 89052 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.872 86.434 226660000 0 191050000 11101000 0 0 2114000 0 0 0 3893600 5067100 0 0 2373100 11060000 19216 2475 17513 161207;161208;161209;161210;161211;161212;161213;161214;161215;161216;161217 128458;128459;128460;128461;128462 128458 5 GLCAIAQAESLR Unmodified 1287.6605 0.66051996 1156 P23396 RPS3 40S ribosomal protein S3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 67.503 67.673 2 1.5759E-06 77587 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 114.97 101.59 247800000 0 0 0 0 25911000 0 26889000 24230000 11007000 31991000 34166000 32114000 0 0 61496000 19217 1156 17514 161218;161219;161220;161221;161222;161223;161224;161225;161226;161227 128463;128464;128465;128466;128467;128468;128469;128470;128471;128472;128473 128463 10 GLDDDRGPWR Unmodified 1185.5527 0.55268407 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 39.008 39.265 3 0.010174 42983 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 50.292 43.989 40735000 0 0 0 2169700 0 4442200 2586000 0 2223100 0 5632600 6563900 6754300 4132000 6231700 19218 2378 17515 161228;161229;161230;161231;161232;161233;161234;161235;161236 128474;128475 128475 2 GLDDSTGGTPLTPAAR Unmodified 1527.7529 0.75290002 4729 Q9NXR1 NDE1 Nuclear distribution protein nudE homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 50.704 50.869 2 0.00018527 57506 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 90.697 76.023 181740000 0 0 0 13780000 15157000 0 0 15640000 0 20772000 26941000 31603000 30785000 0 27064000 19219 4729 17516 161237;161238;161239;161240;161241;161242;161243;161244;161245 128476;128477;128478;128479;128480;128481;128482;128483;128484;128485;128486;128487 128477 12 GLDDTEEPSPPEDK Unmodified 1527.6577 0.65766223 587 O94806 PRKD3 Serine/threonine-protein kinase D3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.187 36.368 2 3.1692E-12 38795 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 122.51 108.09 117990000 0 0 0 6799600 6624500 8613100 6497000 8166700 7572400 10687000 12857000 14576000 12683000 10425000 12488000 19220 587 17517 161246;161247;161248;161249;161250;161251;161252;161253;161254;161255;161256;161257 128488;128489;128490;128491;128492;128493;128494;128495;128496;128497;128498;128499 128495 11 GLDEDETNFLDEVSR Unmodified 1737.7693 0.76933795 4308 Q9GZU8 FAM192A Protein FAM192A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.305 81.365 2 2.4503E-41 94214 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 194.96 182.75 116240000 0 0 0 2039600 5858600 7068300 5197600 8293500 5882800 11899000 11134000 13962000 5852200 11541000 27508000 19221 4308 17518 161258;161259;161260;161261;161262;161263;161264;161265;161266;161267;161268;161269 128500;128501;128502;128503;128504;128505;128506;128507;128508;128509;128510;128511 128505 12 GLDEDRGSWR Unmodified 1189.5476 0.54759869 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 28.516 28.62 3 0.035549 29853 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 51.268 36.601 43159000 0 0 0 4848500 2728300 4431400 3480200 0 0 0 0 10520000 6663500 10487000 0 19222 2378 17519 161270;161271;161272;161273;161274;161275;161276 128512;128513 128512 1 GLDFALLQK Unmodified 1003.5702 0.57023162 2236 Q13123 IK Protein Red yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82.202 81.224 2 0.00034415 101884 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.67 79.6 381110000 7295400 42498000 3652300 12893000 17053000 25963000 19333000 19954000 20825000 37260000 28121000 44852000 25131000 24593000 51687000 19223 2236 17520 161277;161278;161279;161280;161281;161282;161283;161284;161285;161286;161287;161288;161289;161290;161291 128514;128515;128516;128517;128518;128519;128520;128521;128522;128523;128524;128525;128526;128527;128528 128517 15 GLDFSDR Unmodified 808.37153 0.37153181 2317 Q13561 DCTN2 Dynactin subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.691 36.872 2 0.023373 40387 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 88.643 21.649 179780000 0 0 0 7766500 8578900 15401000 11667000 8901600 8152700 15394000 17654000 17292000 14777000 16241000 37958000 19224 2317 17521 161292;161293;161294;161295;161296;161297;161298;161299;161300;161301;161302;161303 128529;128530;128531 128531 3 GLDGPRPNQK Unmodified 1080.5676 0.56760585 1638 P50851 LRBA Lipopolysaccharide-responsive and beige-like anchor protein yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 13.97 10.805 2 6.3657E-10 16003 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 170.05 79.675 109890000 99117000 0 10776000 0 0 0 0 0 0 0 0 0 0 0 0 19225 1638 17522 161304;161305 128532;128533 128532 2 GLDIAMTDMCPGEK Oxidation (M) 1552.6572 0.65715042 5269 Q9Y680 FKBP7 Peptidyl-prolyl cis-trans isomerase FKBP7 yes yes 0 1 0 By MS/MS 2 0 1 1 64.688 58.771 2 0.012437 75381 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 51.727 41.204 11532000 0 11532000 0 0 0 0 0 0 0 0 0 0 0 0 0 19226 5269 17523 161306 128534 128534 6674 1 GLDIPSIK Unmodified 841.49092 0.49091866 3199 Q86XP3 DDX42 ATP-dependent RNA helicase DDX42 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.754 67.836 2 0.012197 77622 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 75.189 32.961 188270000 0 0 0 13543000 10581000 18658000 15149000 11413000 10691000 19515000 19850000 18031000 19365000 11032000 20439000 19227 3199 17524 161307;161308;161309;161310;161311;161312;161313;161314;161315;161316;161317;161318 128535;128536;128537;128538;128539;128540;128541;128542;128543;128544;128545;128546;128547 128541 13 GLDISHISQR Unmodified 1124.5938 0.5938206 3311 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 44.464 44.854 2 0.026694 50305 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 44.203 29.668 62660000 0 0 0 0 0 12400000 9898900 0 0 0 0 11058000 9303600 0 20000000 19228 3311 17525 161319;161320;161321;161322;161323 128548;128549;128550 128550 3 GLDISNVK Unmodified 844.46543 0.46543219 170 O00571 DDX3X ATP-dependent RNA helicase DDX3X yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 40.42 40.657 2 0.0068442 44807 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 94.262 43.296 418080000 0 0 0 0 0 61287000 59144000 53279000 743000 87017000 0 77634000 78981000 0 0 19229 170 17526 161324;161325;161326;161327;161328;161329;161330 128551;128552 128552 2 GLDKLEENLPILQQPTEK Unmodified 2064.1103 0.11028532 421 O60664 PLIN3 Perilipin-3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 82.094 82.238 3 0.012627 94905 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 29.8 25.694 28839000 0 0 0 0 0 0 0 3351500 0 5147300 0 6905400 3363500 0 10071000 19230 421 17527 161331;161332;161333;161334;161335 128553 128553 1 GLDLEQITSATLMK Oxidation (M) 1534.7913 0.79125936 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 84.547 84.59 2 2.9309E-09 97900 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 97.911 88.224 52919000 0 0 0 2238100 5329800 0 0 5269000 0 9825700 6422400 8304100 3538500 4107100 7884000 19231 3023 17528 161336;161337;161338;161339;161340;161341;161342;161343;161344 128554;128555;128556;128557;128558;128559;128560;128561;128562;128563;128564;128565 128560 4628 12 GLDLEQITSATLMK Unmodified 1518.7963 0.79634474 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By MS/MS 2 0 1 1 94.032 89.136 2 7.4002E-05 110643 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.86 84.631 16094000 0 16094000 0 0 0 0 0 0 0 0 0 0 0 0 0 19232 3023 17528 161345 128566 128566 1 GLDLLEK Unmodified 786.44872 0.4487195 1971 P78318 IGBP1 Immunoglobulin-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 56.478 56.678 2 0.04604 63347 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 66.087 8.6236 130390000 0 0 0 0 6714700 14248000 10861000 0 6180400 12109000 18305000 13942000 11949000 12047000 24034000 19233 1971 17529 161346;161347;161348;161349;161350;161351;161352;161353;161354;161355 128567;128568;128569;128570 128569 4 GLDNTEFQGK Unmodified 1107.5197 0.51965261 4209 Q9BWF3;Q9BQ04 RBM4;RBM4B RNA-binding protein 4;RNA-binding protein 4B yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.177 32.363 2 0.00020551 35831 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 141.39 124 355200000 0 0 0 35694000 15117000 16517000 20226000 30457000 16284000 29524000 43817000 40295000 53376000 22572000 31321000 19234 4209 17530 161356;161357;161358;161359;161360;161361;161362;161363;161364;161365;161366;161367 128571;128572;128573;128574;128575;128576;128577;128578;128579;128580 128571 10 GLDPALGSETLASR Unmodified 1385.7151 0.71505795 5183 Q9Y448 KNSTRN Small kinetochore-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.275 64.366 2 3.9804E-40 73661 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 167.18 132.46 308290000 0 0 0 14817000 17510000 27089000 19426000 16853000 18636000 25193000 31072000 36767000 25200000 28934000 46792000 19235 5183 17531 161368;161369;161370;161371;161372;161373;161374;161375;161376;161377;161378;161379 128581;128582;128583;128584;128585;128586;128587;128588;128589;128590;128591;128592 128582 12 GLDPARVNVPVIGGHAGK Unmodified 1755.9744 0.97440096 1423 P40926 MDH2 Malate dehydrogenase, mitochondrial yes yes 0 0 1 By MS/MS 2 0 1 1 75.348 67.218 4 0.0068357 88821 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 39.91 35.293 20791000 20791000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19236 1423 17532 161380 128593;128594 128594 2 GLDPLASEDTSR Unmodified 1259.5994 0.59935949 629 O95229 ZWINT ZW10 interactor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 49.815 50.032 2 0.0049742 55554 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 55.806 45.656 104110000 0 0 0 0 10808000 0 0 0 0 18371000 17501000 0 18022000 15091000 24319000 19237 629 17533 161381;161382;161383;161384;161385;161386 128595;128596;128597 128596 3 GLDPLASEDTSRQK Unmodified 1515.7529 0.75290002 629 O95229 ZWINT ZW10 interactor yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 45.013 40.371 3 0.01169 52287 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 44.968 30.938 56015000 0 54249000 1765900 0 0 0 0 0 0 0 0 0 0 0 0 19238 629 17534 161387;161388;161389 128598;128599;128600 128598 3 GLDPVEILQER Unmodified 1267.6772 0.67721588 1656 P51532 SMARCA4 Transcription activator BRG1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 82.806 82.788 2 0.0029345 95779 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 75.294 60.143 30798000 0 0 0 2809700 0 7678200 0 0 0 6582700 0 0 0 0 13728000 19239 1656 17535 161390;161391;161392;161393;161394 128601;128602;128603;128604;128605 128602 5 GLDPYNVLAPK Unmodified 1185.6394 0.63937381 924 P10606 COX5B Cytochrome c oxidase subunit 5B, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching 8 3.46 2 6 1 1 1 1 1 1 1 1 76.343 75.468 2 0.0060201 93543 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.731 68.437 130490000 0 109050000 1894400 5605800 0 0 0 2391000 0 0 3355200 3543200 1940600 2713600 0 19240 924 17536 161395;161396;161397;161398;161399;161400;161401;161402 128606;128607 128606 2 GLDSFLNR Unmodified 920.47158 0.4715802 3955 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.891 64.979 2 0.012727 75279 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 73.975 27.311 76571000 0 0 0 3733300 3558400 5502600 6022200 5039400 5783000 6503500 6334600 8854500 7781500 6816600 10641000 19241 3955 17537 161403;161404;161405;161406;161407;161408;161409;161410;161411;161412;161413;161414 128608;128609;128610;128611;128612;128613;128614;128615;128616;128617 128616 9 GLDSFLNRDGEVK Unmodified 1448.726 0.72595699 3955 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.64 1.67 1 21 1 1 2 2 1 2 2 2 1 2 2 2 2 64.124 63.973 2;3 2.5981E-16 72351 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 136.53 108.52 518960000 0 16103000 0 16610000 16035000 43813000 24326000 39995000 30021000 52350000 37027000 45537000 48397000 55728000 93023000 19242 3955 17538 161415;161416;161417;161418;161419;161420;161421;161422;161423;161424;161425;161426;161427;161428;161429;161430;161431;161432;161433;161434;161435;161436 128618;128619;128620;128621;128622;128623;128624;128625;128626;128627;128628;128629;128630;128631;128632;128633;128634;128635;128636;128637;128638 128632 7 GLDTETTVEVAWCELQDRK Unmodified 2249.0634 0.063411478 4393 Q9H4A3 WNK1 Serine/threonine-protein kinase WNK1 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 91.325 85.49 3 3.0232E-10 109147 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.138 58.048 27993000 27993000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19243 4393 17539 161437;161438 128639;128640 128640 2 GLDTLVESIRR Unmodified 1257.7041 0.70409934 710 O95999 BCL10 B-cell lymphoma/leukemia 10 yes yes 0 0 1 By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 74.724 74.811 3 0.00010482 85680 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.88 77.652 38783000 0 0 0 1095000 0 3697200 1816000 1771400 3017400 4984500 2579400 0 1766100 2776000 15280000 19244 710 17540 161439;161440;161441;161442;161443;161444;161445;161446;161447;161448 128641 128641 1 GLDVDSLVIEHIQVNK Unmodified 1777.9574 0.95741349 1076 P18621 RPL17 60S ribosomal protein L17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 2 1 1 89.618 84.86 3 0.00019448 107265 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.654 59.393 149250000 119160000 28622000 1475300 0 0 0 0 0 0 0 0 0 0 0 0 19245 1076 17541 161449;161450;161451;161452 128642;128643;128644 128644 2 GLDVEDVK Unmodified 873.44436 0.4443624 1062;3670 P17844;Q92841 DDX5;DDX17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 no no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 2 24 1 1 2 2 2 2 2 2 2 2 2 2 2 2 38.549 38.379 1;2 0.0069006 42445 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 91.626 52.408 2384100000 0 63642000 858290 131280000 127510000 169880000 206930000 146930000 125520000 264640000 247320000 210000000 200640000 178660000 310290000 19246 1062;3670 17542 161453;161454;161455;161456;161457;161458;161459;161460;161461;161462;161463;161464;161465;161466;161467;161468;161469;161470;161471;161472;161473;161474;161475;161476;161477;161478 128645;128646;128647;128648;128649;128650;128651;128652;128653;128654;128655;128656;128657;128658;128659;128660;128661 128646 15 GLDYLHSEK Unmodified 1060.5189 0.51892433 4811;5279 Q9P289;Q9Y6E0 STK26;STK24 Serine/threonine-protein kinase 26;Serine/threonine-protein kinase 24;Serine/threonine-protein kinase 24 36 kDa subunit;Serine/threonine-protein kinase 24 12 kDa subunit no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 34.338 33.626 2 0.005064 36669 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 84.743 73.022 306320000 0 124910000 52991000 8667200 9722400 19946000 13577000 8819000 10085000 0 21857000 0 16911000 18828000 0 19247 4811;5279 17543 161479;161480;161481;161482;161483;161484;161485;161486;161487;161488;161489 128662;128663;128664;128665;128666;128667;128668;128669;128670;128671;128672;128673 128667 10 GLEAEVLR Unmodified 885.49198 0.4919813 3090 Q7Z406 MYH14 Myosin-14 yes yes 0 0 0 By MS/MS 10 0 1 1 52.746 52.105 2 0.042322 59648 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 49.65 16.292 11662000 0 0 0 11662000 0 0 0 0 0 0 0 0 0 0 0 19248 3090 17544 161490 128674 128674 1 GLEAPSGQQHRHAAGEK Unmodified 1771.8714 0.87139245 2295 Q13459 MYO9B Unconventional myosin-IXb yes yes 0 0 1 By MS/MS 2 0 1 1 14.199 10.151 3 0.0032955 15280 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.537 32.651 11669000 11669000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19249 2295 17545 161491 128675 128675 1 GLECSPSTPTMNSYFYK Oxidation (M) 1996.8547 0.85466426 2167 Q08AM6 VAC14 Protein VAC14 homolog yes yes 0 1 0 By MS/MS 2 0 1 1 68.669 62.769 2 7.6163E-05 80009 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.301 85.439 18415000 0 18415000 0 0 0 0 0 0 0 0 0 0 0 0 0 19250 2167 17546 161492 128676 128676 3481 1 GLECSPSTPTMNSYFYK Unmodified 1980.8597 0.85974963 2167 Q08AM6 VAC14 Protein VAC14 homolog yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 78.201 74.124 2 5.7424E-52 92330 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 142.83 131.92 46541000 0 46541000 0 0 0 0 0 0 0 0 0 0 0 0 0 19251 2167 17546 161493;161494 128677 128677 1 GLEDPSQVVR Unmodified 1098.5669 0.56693715 3522 Q8TEX9 IPO4 Importin-4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 45.517 45.659 2 0.0017601 51256 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 88.819 53.524 128760000 0 0 0 9763900 9565400 16503000 14543000 0 7644500 15221000 18196000 14851000 0 0 22477000 19252 3522 17547 161495;161496;161497;161498;161499;161500;161501;161502;161503 128678;128679;128680;128681;128682;128683;128684;128685;128686 128679 9 GLEEIPVFDISEK Unmodified 1474.7555 0.75552578 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 87.519 87.577 2 0.0017918 101697 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 61.65 43.143 24287000 0 0 0 0 2524100 3233100 0 0 0 4580800 0 3740200 2775200 2556300 4877600 19253 2804 17548 161504;161505;161506;161507;161508;161509;161510 128687;128688;128689;128690;128691;128692 128690 6 GLEEITVHNK Unmodified 1138.5982 0.59823728 1695 P52732 KIF11 Kinesin-like protein KIF11 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 38.559 34.678 2;3 0.00012391 43752 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 164.53 113.47 57558000 0 5088400 52470000 0 0 0 0 0 0 0 0 0 0 0 0 19254 1695 17549 161511;161512;161513 128693;128694;128695 128695 0 GLEELIDYTGGLK Unmodified 1406.7293 0.72931103 4446 Q9H871 RMND5A Protein RMD5 homolog A yes yes 0 0 0 By MS/MS 10 0 1 1 87.839 87.989 2 0.012521 101798 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.548 35.646 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19255 4446 17550 161514 128696 128696 1 GLEELVK Unmodified 786.44872 0.4487195 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 51.469 51.61 2 0.023344 58073 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 91.584 11.207 96129000 0 0 0 7771200 0 14007000 5347000 0 0 10644000 21192000 0 0 13714000 23453000 19256 487 17551 161515;161516;161517;161518;161519;161520;161521 128697;128698;128699;128700;128701;128702 128701 6 GLEEPEMDPK Oxidation (M) 1159.5067 0.50670466 2645 Q1KMD3 HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 23.663 23.846 2 0.0011595 25778 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 88.819 84.403 100390000 0 0 0 15326000 0 12241000 0 10349000 9934300 14468000 0 21549000 0 16525000 0 19257 2645 17552 161522;161523;161524;161525;161526;161527;161528 128703;128704;128705;128706;128707;128708;128709 128709 4303 5 GLEEPEMDPK Unmodified 1143.5118 0.51179004 2645 Q1KMD3 HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40.977 40.268 2 0.0021988 43905 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 85.67 77.999 488680000 8649600 57528000 0 23478000 23474000 29100000 27627000 26836000 20363000 37806000 43515000 61364000 41107000 32467000 55369000 19258 2645 17552 161529;161530;161531;161532;161533;161534;161535;161536;161537;161538;161539;161540;161541;161542 128710;128711;128712;128713;128714;128715;128716;128717;128718;128719;128720;128721;128722 128718 12 GLEERVAAAVDLIIK Unmodified 1595.9247 0.9246568 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 1 By MS/MS 3 0 1 1 97.582 94.274 3 0.0064486 113053 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 48.112 28.005 2023300 0 2023300 0 0 0 0 0 0 0 0 0 0 0 0 0 19259 1565 17553 161543 128723 128723 1 GLEETVAK Unmodified 845.44945 0.44944778 1328 P33176 KIF5B Kinesin-1 heavy chain yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.4 3.2 3 12 2 1 1 1 1 1 1 1 2 1 1 1 1 23.58 23.124 2 0.0099306 24385 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 81.297 28.614 1222500000 10330000 770290000 0 29298000 26888000 31741000 30200000 25943000 0 35220000 55880000 48225000 54892000 42658000 60939000 19260 1328 17554 161544;161545;161546;161547;161548;161549;161550;161551;161552;161553;161554;161555;161556;161557;161558 128724;128725;128726;128727;128728 128727 4 GLEFLSVPSTYYK Unmodified 1502.7657 0.76569654 1323 P32754 HPD 4-hydroxyphenylpyruvate dioxygenase yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 85.918 86.078 2 6.3173E-08 99445 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 120.09 109.57 56784000 0 0 0 0 0 0 0 1522900 0 0 8902500 5338600 0 4171600 36849000 19261 1323 17555 161559;161560;161561;161562;161563 128729;128730;128731;128732 128729 4 GLEGNANSPAHLRGPEQTSGQTAK Unmodified 2419.184 0.18401239 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 1 2 2 1 1 1 2 2 2 1 1 32.97 33.193 3;4 2.5497E-09 36272 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 58.457 46.5 225010000 0 0 0 9636000 7958700 14438000 17975000 12537000 12316000 20948000 29565000 33954000 27630000 9757900 28289000 19262 3443 17556 161564;161565;161566;161567;161568;161569;161570;161571;161572;161573;161574;161575;161576;161577;161578;161579;161580 128733;128734;128735;128736;128737;128738;128739;128740;128741;128742 128737 10 GLEHVTVDDLVAEITPK Unmodified 1834.9676 0.96764382 4544 Q9NPA8 ENY2 Transcription and mRNA export factor ENY2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 4 1 2 1 95.141 90.078 3 5.0245E-05 112407 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.983 65.898 80721000 14058000 65238000 1425600 0 0 0 0 0 0 0 0 0 0 0 0 19263 4544 17557 161581;161582;161583;161584 128743;128744;128745;128746 128743 4 GLELANGIK Unmodified 913.52328 0.52328142 1006 P14735 IDE Insulin-degrading enzyme yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 52.389 52.597 2 0.0072692 60533 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 72.875 33.902 75761000 0 0 0 26977000 0 1888500 2246200 2380100 0 4510800 7535400 5469800 3085000 5143500 16525000 19264 1006 17558 161585;161586;161587;161588;161589;161590;161591;161592;161593;161594 128747;128748 128748 2 GLELTQR Unmodified 815.45012 0.45011648 664 O95466 FMNL1 Formin-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 30.804 30.987 2 0.01787 33596 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 113.08 41.063 116580000 0 0 0 15871000 9984800 0 10078000 9725200 8459400 0 0 15776000 23949000 9477300 13257000 19265 664 17559 161595;161596;161597;161598;161599;161600;161601;161602;161603 128749;128750;128751;128752;128753;128754;128755;128756 128750 8 GLEPEVAALYFPK Unmodified 1432.7602 0.76021723 3616 Q92539 LPIN2 Phosphatidate phosphatase LPIN2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 88.173 87.291 2 0.0039383 100847 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.445 39.732 20540000 0 14395000 0 0 0 0 0 0 0 1455200 0 1822900 0 1051500 1814900 19266 3616 17560 161604;161605;161606;161607;161608 128757;128758;128759 128758 3 GLEPMLEASRNGLPVDITK Oxidation (M) 2055.067 0.067040293 2921 Q6P1N0 CC2D1A Coiled-coil and C2 domain-containing protein 1A yes yes 0 1 1 By MS/MS 2 0 1 1 79.51 76.936 3 0.000852 93328 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 49.224 39.662 3707200 0 0 3707200 0 0 0 0 0 0 0 0 0 0 0 0 19267 2921 17561 161609 128760;128761 128760 4546 2 GLEPSPAAVAALPPEVR Unmodified 1672.9148 0.91482039 4808 Q9P265 DIP2B Disco-interacting protein 2 homolog B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 80.88 80.924 2 2.4279E-05 93655 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 77.185 67.497 39080000 0 0 0 2111400 2316300 2945800 3365300 3061100 0 0 5825700 6577500 3110000 4366300 5401100 19268 4808 17562 161610;161611;161612;161613;161614;161615;161616;161617;161618;161619 128762;128763;128764;128765;128766;128767;128768;128769;128770 128768 9 GLESAFTEK Unmodified 980.48148 0.48147619 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 0 0 By MS/MS 2 0 1 1 51.534 45.787 2 0.014026 59600 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.452 47.645 117530000 0 117530000 0 0 0 0 0 0 0 0 0 0 0 0 0 19269 2193 17563 161620 128771 128771 1 GLESLPPLRPQQNPVLPVAGER Unmodified 2366.307 0.30702806 1779 P56192 MARS Methionine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 82.037 82.141 3 4.0217E-08 94670 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.602 56.531 242130000 0 0 0 0 5647700 27177000 6342200 15282000 13157000 30746000 21643000 21611000 9997900 16391000 74132000 19270 1779 17564 161621;161622;161623;161624;161625;161626;161627;161628;161629;161630;161631 128772;128773;128774;128775;128776;128777;128778;128779;128780;128781 128775 10 GLESTTLADK Unmodified 1033.5292 0.52915466 1123 P21291 CSRP1 Cysteine and glycine-rich protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.78 3.79 3 2 4 2 2 1 1 1 1 1 34.144 31.885 2 0.00061836 38948 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 116.05 46.052 391960000 92310000 68805000 25314000 4598500 0 0 0 0 0 0 45435000 37524000 0 0 117970000 19271 1123 17565 161632;161633;161634;161635;161636;161637;161638;161639;161640 128782;128783;128784;128785;128786;128787;128788;128789 128785 5 GLETGSREVVSHVIK Unmodified 1609.8788 0.87876924 1323 P32754 HPD 4-hydroxyphenylpyruvate dioxygenase yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 49.314 49.786 3 0.014991 55053 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.941 28.559 41504000 0 0 0 0 0 0 0 0 0 0 0 0 0 8496300 33007000 19272 1323 17566 161641;161642 128790 128790 0 GLETHLIALK Unmodified 1093.6495 0.64954457 2465 Q14CX7 NAA25 N-alpha-acetyltransferase 25, NatB auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 65.732 64.651 2 1.7018E-23 73035 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 175.51 116.6 808620000 50435000 0 6232300 0 0 0 206270000 245800000 252270000 11846000 14564000 17359000 0 0 3839600 19273 2465 17567 161643;161644;161645;161646;161647;161648;161649;161650;161651 128791;128792;128793;128794;128795;128796;128797;128798;128799;128800;128801;128802;128803;128804 128795 14 GLEVINDYHFR Unmodified 1361.6728 0.67279921 2627 Q16666;Q6K0P9 IFI16;PYHIN1 Gamma-interferon-inducible protein 16;Pyrin and HIN domain-containing protein 1 yes no 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 70.415 70.614 3 0.0034306 80454 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.211 45.601 35113000 0 0 0 0 0 4199000 0 0 2770900 2607500 2940500 5094800 2632100 3213000 11655000 19274 2627 17568 161652;161653;161654;161655;161656;161657;161658;161659 128805;128806 128806 1 GLEVPFVPMTLPTK Oxidation (M) 1543.832 0.83200197 1493 P46019 PHKA2 Phosphorylase b kinase regulatory subunit alpha, liver isoform yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 87.443 87.518 2 0.0048416 101480 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 42.743 12.407 14321000 0 0 0 0 2573000 0 0 2824400 0 5710400 3213400 0 0 0 0 19275 1493 17569 161660;161661;161662;161663 128807 128807 2348 1 GLEVPFVPMTLPTK Unmodified 1527.8371 0.83708734 1493 P46019 PHKA2 Phosphorylase b kinase regulatory subunit alpha, liver isoform yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 95.755 93.439 2 0.0008245 115205 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.692 59.912 37235000 0 36000000 0 0 0 0 0 0 0 0 0 0 0 0 1235500 19276 1493 17569 161664;161665 128808;128809 128808 2 GLEVTDDSPK Unmodified 1059.5084 0.50841922 1578 P49588 AARS Alanine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30.572 29.96 2 0.00059238 32954 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 131.06 104.1 774360000 21441000 179910000 0 24859000 14979000 35110000 24321000 18628000 13356000 45802000 67285000 71861000 34152000 55979000 166680000 19277 1578 17570 161666;161667;161668;161669;161670;161671;161672;161673;161674;161675;161676;161677;161678;161679 128810;128811;128812;128813;128814;128815;128816;128817;128818;128819;128820;128821;128822 128810 13 GLFDDEDEESDLFTEAPQDRQAGASVK Unmodified 2968.321 0.32101897 2840 Q641Q2 FAM21A WASH complex subunit FAM21A yes yes 0 0 1 By MS/MS 2 0 1 1 85.614 77.484 3 1.9002E-46 101079 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 108.77 106 15279000 15279000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19278 2840 17571 161680 128823;128824 128823 2 GLFDEYGSK Unmodified 1014.4658 0.46582612 1002 P14625;Q58FF3 HSP90B1;HSP90B2P Endoplasmin;Putative endoplasmin-like protein yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.482 55.611 2 0.0034522 63226 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 94.302 79.52 1350800000 0 0 0 58771000 55861000 119810000 74146000 84364000 52965000 107320000 193940000 118930000 97254000 96368000 291040000 19279 1002 17572 161681;161682;161683;161684;161685;161686;161687;161688;161689;161690;161691;161692 128825;128826;128827;128828;128829;128830;128831;128832;128833;128834;128835;128836;128837 128826 11 GLFEEAAK Unmodified 863.43888 0.43888309 3311 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.573 41.751 2 0.015253 45815 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 69.176 38.756 271620000 0 0 0 13068000 15206000 24241000 18653000 25912000 17914000 27312000 23980000 26462000 26626000 18638000 33610000 19280 3311 17573 161693;161694;161695;161696;161697;161698;161699;161700;161701;161702;161703;161704 128838;128839;128840;128841 128841 4 GLFIIDDK Unmodified 919.50148 0.50148335 2131;2245 Q06830;Q13162 PRDX1;PRDX4 Peroxiredoxin-1;Peroxiredoxin-4 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.85 3.86 7 1 12 2 3 3 1 1 1 1 1 1 1 1 1 1 1 1 76.114 75.085 1;2 0.0066425 94029 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.54 99.615 8602400000 405730000 588430000 579790000 460330000 212580000 282940000 285170000 270900000 242550000 435730000 907790000 1247400000 247470000 613550000 1822100000 19281 2131;2245 17574 161705;161706;161707;161708;161709;161710;161711;161712;161713;161714;161715;161716;161717;161718;161719;161720;161721;161722;161723;161724 128842;128843;128844;128845;128846;128847;128848;128849;128850;128851;128852;128853;128854;128855;128856;128857;128858;128859;128860;128861;128862;128863;128864;128865;128866;128867 128846 25 GLFIIDGK Unmodified 861.496 0.49600404 1317 P32119 PRDX2 Peroxiredoxin-2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.57 3.06 5 23 3 1 1 2 2 2 2 2 1 2 2 2 2 2 2 75.339 74.714 1;2 0.0071747 85652 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 133.79 51.406 3357100000 582070000 238530 263980000 230680000 63939000 99639000 84403000 140800000 61668000 129860000 308330000 357950000 91597000 221190000 720780000 19282 1317 17575 161725;161726;161727;161728;161729;161730;161731;161732;161733;161734;161735;161736;161737;161738;161739;161740;161741;161742;161743;161744;161745;161746;161747;161748;161749;161750;161751;161752 128868;128869;128870;128871;128872;128873;128874;128875;128876;128877;128878;128879;128880;128881;128882;128883;128884;128885;128886;128887;128888 128873 17 GLFIIDPNGVIK Unmodified 1284.7442 0.74417324 1265 P30048 PRDX3 Thioredoxin-dependent peroxide reductase, mitochondrial yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 89.399 89.543 2 0.0014361 103613 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.897 58.481 28517000 0 0 0 0 0 2120000 0 1952300 0 0 4274400 4010600 0 0 16160000 19283 1265 17576 161753;161754;161755;161756;161757 128889;128890;128891;128892 128889 4 GLFLPEDENLREK Unmodified 1558.7991 0.79912193 2191 Q12797 ASPH Aspartyl/asparaginyl beta-hydroxylase yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 67.564 67.607 3 0.024148 77327 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 33.195 28.879 59110000 0 0 0 6167900 2917600 6977100 5625500 4672600 6146200 4469600 7636100 0 0 4263300 10234000 19284 2191 17577 161758;161759;161760;161761;161762;161763;161764;161765;161766;161767 128893;128894 128894 2 GLGACTSRPIHPSK Unmodified 1479.7616 0.76163099 4306 Q9GZT8 NIF3L1 NIF3-like protein 1 yes yes 0 0 1 By MS/MS 10 0 1 1 19.874 20.39 3 0.0091623 20665 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 37.954 24.946 12569000 0 0 0 0 0 0 0 0 0 0 12569000 0 0 0 0 19285 4306 17578 161768 128895 128895 1 GLGAFVIDSDHLGHR Unmodified 1592.8059 0.80593865 2230 Q13057 COASY Bifunctional coenzyme A synthase;Phosphopantetheine adenylyltransferase;Dephospho-CoA kinase yes yes 0 0 0 By MS/MS 10 0 1 1 69.925 70.391 3 0.0041516 80234 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.941 33.651 4212800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4212800 19286 2230 17579 161769 128896 128896 1 GLGAGAGAGEESPATSLPR Unmodified 1696.838 0.83802663 262 O15173 PGRMC2 Membrane-associated progesterone receptor component 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 54.951 55.079 2 9.8323E-24 62689 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 99.531 93.807 79641000 0 0 0 8110100 7757800 7154000 5974400 0 4391500 6877800 7507200 10446000 6039100 6254000 9129500 19287 262 17580 161770;161771;161772;161773;161774;161775;161776;161777;161778;161779;161780 128897;128898;128899;128900;128901;128902;128903;128904;128905;128906 128897 10 GLGATTHPTAAVK Unmodified 1222.667 0.66698555 1702 P52789 HK2 Hexokinase-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 5.09 3.73 5 2 4 1 4 2 1 1 1 1 28.685 25.797 2;3 4.1728E-07 32489 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 116.77 70.608 957420000 280840000 392940000 272800000 0 0 0 0 0 2539900 0 4157100 0 4139700 0 0 19288 1702 17581 161781;161782;161783;161784;161785;161786;161787;161788;161789;161790;161791 128907;128908;128909;128910;128911;128912;128913;128914;128915;128916;128917;128918;128919;128920;128921;128922 128911 13 GLGDIESQQDALK Unmodified 1372.6834 0.68342347 5317 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 31 2 2 1 3 5 2 3 3 3 2 3 2 61.709 61.844 2 0.00065218 69812 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 97.565 70.609 + 20076000000 0 0 0 273080000 268490000 224500000 306140000 16365000000 202940000 222410000 448510000 384990000 776130000 253680000 349740000 19289 5317 17582 161792;161793;161794;161795;161796;161797;161798;161799;161800;161801;161802;161803;161804;161805;161806;161807;161808;161809;161810;161811;161812;161813;161814;161815;161816;161817;161818;161819;161820;161821;161822 128923;128924;128925;128926;128927;128928;128929;128930;128931;128932;128933;128934;128935;128936;128937;128938;128939;128940;128941;128942;128943;128944;128945;128946;128947;128948;128949;128950;128951;128952;128953;128954 128944 24 GLGEGVPSSQR Unmodified 1085.5465 0.54653606 34 A7E2V4 ZSWIM8 Zinc finger SWIM domain-containing protein 8 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.124 27.322 2 0.0012585 29330 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 73.985 49.062 109300000 0 0 0 6412400 5960600 9525600 6772600 8167100 6466700 9511400 8712100 12261000 12174000 9343500 13994000 19290 34 17583 161823;161824;161825;161826;161827;161828;161829;161830;161831;161832;161833;161834 128955;128956;128957;128958;128959;128960;128961;128962;128963;128964 128956 9 GLGFSIAGGK Unmodified 905.49707 0.49706667 2381 Q14160 SCRIB Protein scribble homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.763 61.863 2 0.0038348 70452 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 75.043 49.593 123920000 0 0 0 5357200 7798000 9339900 7520600 5859300 7974600 12080000 12171000 14967000 10239000 9808400 20806000 19291 2381 17584 161835;161836;161837;161838;161839;161840;161841;161842;161843;161844;161845;161846 128965;128966;128967;128968;128969;128970;128971;128972 128966 8 GLGGIMVK Oxidation (M) 789.44186 0.44185998 583 O94776 MTA2 Metastasis-associated protein MTA2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 39.717 39.948 2 0.018343 44116 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 57.102 24.173 156280000 0 0 0 0 11943000 16866000 14817000 11290000 10143000 16304000 16596000 22925000 0 12756000 22643000 19292 583 17585 161847;161848;161849;161850;161851;161852;161853;161854;161855;161856 128973;128974;128975;128976;128977;128978;128979;128980 128974 742 8 GLGGIMVK Unmodified 773.44695 0.44694536 583 O94776 MTA2 Metastasis-associated protein MTA2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 50.285 50.183 2 0.02054 57310 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 62.715 32.645 40027000 0 0 0 0 11108000 0 11778000 0 0 17142000 0 0 0 0 0 19293 583 17585 161857;161858;161859 128981;128982;128983;128984 128983 4 GLGGSGGAGGPPGTPYELAK Unmodified 1741.8635 0.8635131 4999 Q9ULL5 PRR12 Proline-rich protein 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 62.656 62.291 2 5.713E-47 70540 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 114.7 97.231 153000000 0 32777000 0 5925300 7598600 9242900 9184000 8203100 6713700 11282000 11663000 13476000 10839000 8567900 17523000 19294 4999 17586 161860;161861;161862;161863;161864;161865;161866;161867;161868;161869;161870;161871;161872;161873 128985;128986;128987;128988;128989;128990;128991;128992;128993;128994;128995;128996;128997;128998 128990 14 GLGHPPSSPLLK Unmodified 1201.6819 0.68190733 690 O95785 WIZ Protein Wiz yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 52.195 50.265 3 0.00648 55093 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 35.774 27.773 231460000 65771000 21793000 0 22045000 0 33571000 0 0 22368000 0 0 41061000 0 24853000 0 19295 690 17587 161874;161875;161876;161877;161878;161879;161880 128999;129000;129001;129002;129003;129004 129003 4 GLGHQVATDALVAMEK Oxidation (M) 1654.8349 0.83485551 5168 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 52.696 52.875 3 0.0018835 59833 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 51.265 42.731 49102000 0 0 0 7822500 0 0 0 0 5026300 13037000 5907900 0 4674600 4452700 8180600 19296 5168 17588 161881;161882;161883;161884;161885;161886;161887 129005;129006 129005 6542 0 GLGHQVATDALVAMEK Unmodified 1638.8399 0.83994089 5168 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 75.984 72.12 3 0.00062888 82261 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.589 47.613 16726000 5503600 0 0 0 0 0 0 0 0 0 0 0 0 0 11223000 19297 5168 17588 161888;161889 129007;129008 129007 2 GLGHTGGTLDK Unmodified 1054.5407 0.5407224 1097 P19971 TYMP Thymidine phosphorylase yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 13.972 14.122 2 0.00017868 13581 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 134.77 76.646 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19298 1097 17589 161890;161891 129009;129010 129010 2 GLGILSLK Unmodified 799.51674 0.51673948 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77.615 76.637 2 0.0074646 88107 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 89.55 22.556 516420000 62212000 15525000 9904700 17495000 22962000 40207000 31478000 30582000 26202000 39369000 34994000 50735000 33663000 36082000 65006000 19299 3641 17590 161892;161893;161894;161895;161896;161897;161898;161899;161900;161901;161902;161903;161904;161905;161906 129011;129012;129013;129014;129015;129016;129017;129018;129019;129020;129021;129022;129023;129024 129013 14 GLGKPGGQGDAIQLSPK Unmodified 1621.8788 0.87876924 2819 Q5VV41 ARHGEF16 Rho guanine nucleotide exchange factor 16 yes yes 0 0 1 By MS/MS 2 0 1 1 56.853 48.672 3 0.0017906 66550 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.602 26.857 7365000 7365000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19300 2819 17591 161907 129025 129025 1 GLGLDDALEPR Unmodified 1154.5932 0.5931519 5077 Q9Y230 RUVBL2 RuvB-like 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.959 70.036 2 1.6385E-05 81399 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 134.26 115.17 1120300000 0 0 0 54782000 54471000 92250000 73658000 67635000 58517000 94782000 122600000 128110000 83471000 108340000 181640000 19301 5077 17592 161908;161909;161910;161911;161912;161913;161914;161915;161916;161917;161918;161919 129026;129027;129028;129029;129030;129031;129032;129033;129034;129035;129036;129037;129038;129039;129040;129041;129042;129043;129044;129045;129046 129043 21 GLGLDESGLAK Unmodified 1058.5608 0.56078914 5086 Q9Y265 RUVBL1 RuvB-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55.035 54.46 2 2.0018E-05 60981 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 130.75 90.479 3800100000 0 2837500000 35419000 86585000 68044000 64687000 96736000 60749000 43597000 78464000 88126000 92550000 64467000 68767000 114460000 19302 5086 17593 161920;161921;161922;161923;161924;161925;161926;161927;161928;161929;161930;161931;161932;161933 129047;129048;129049;129050;129051;129052;129053;129054;129055;129056;129057;129058;129059;129060;129061;129062;129063;129064;129065;129066;129067;129068;129069 129055 23 GLGLGANLTEAQALTPTGPSR Unmodified 2023.0698 0.069817485 3686 Q92917 GPKOW G patch domain and KOW motifs-containing protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 81.478 81.53 2 2.3266E-97 93954 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 223.7 201.47 205450000 0 0 0 3496400 13271000 15262000 9923200 10567000 10151000 39128000 27987000 0 11840000 16629000 47195000 19303 3686 17594 161934;161935;161936;161937;161938;161939;161940;161941;161942;161943;161944 129070;129071;129072;129073;129074;129075;129076;129077;129078;129079;129080;129081 129074 12 GLGLPGCIPGLLPENSMDCI Oxidation (M) 2128.0003 0.0002826355 4676 Q9NVP2 ASF1B Histone chaperone ASF1B yes yes 0 1 0 By MS/MS 2 0 1 1 98.638 93.903 2 1.1068E-09 116202 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.689 80.459 28151000 0 28151000 0 0 0 0 0 0 0 0 0 0 0 0 0 19304 4676 17595 161945 129082 129082 6088 1 GLGLPGCIPGLLPENSMDCI Unmodified 2112.0054 0.0053680134 4676 Q9NVP2 ASF1B Histone chaperone ASF1B yes yes 0 0 0 By MS/MS 2 0 1 1 99.937 95.224 2 5.4576E-08 117772 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.29 113.11 36987000 0 36987000 0 0 0 0 0 0 0 0 0 0 0 0 0 19305 4676 17595 161946 129083 129083 1 GLGNQVEVLK Unmodified 1055.5975 0.597509 4808 Q9P265 DIP2B Disco-interacting protein 2 homolog B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.8 3.12 3 1 1 1 2 1 1 56.907 52.361 2 0.003971 67674 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.853 52.891 222300000 5227200 208750000 2319800 0 0 6001500 0 0 0 0 0 0 0 0 0 19306 4808 17596 161947;161948;161949;161950;161951 129084;129085;129086;129087 129086 4 GLGPLAEAAAAGDGAAAAGAAR Unmodified 1807.9177 0.91767394 371 O43815 STRN Striatin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.258 75.317 2 5.3495E-20 86376 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 121.24 108.23 86511000 0 0 0 3631400 6107800 5270400 7783300 7339800 4180900 8818000 7693000 11325000 7164100 6038500 11159000 19307 371 17597 161952;161953;161954;161955;161956;161957;161958;161959;161960;161961;161962;161963 129088;129089;129090;129091;129092;129093;129094;129095;129096;129097 129091 10 GLGPLGASK Unmodified 798.45995 0.45995289 5330 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 2 1 1 1 2 1 1 1 2 1 1 1 18.25 18.439 2 0.014232 18978 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 58.604 1.4269 + 178100000 0 0 0 19785000 11502000 10287000 10846000 22941000 8342100 13878000 10769000 34705000 12946000 8503400 13598000 19308 5330 17598 161964;161965;161966;161967;161968;161969;161970;161971;161972;161973;161974;161975;161976;161977;161978 129098;129099;129100 129100 3 GLGSTVQEIDLTGVK Unmodified 1515.8144 0.81443765 3779 Q96CN7 ISOC1 Isochorismatase domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.29 3.28 3 11 1 2 1 1 1 1 1 1 1 1 1 1 1 77.783 76.573 2;3 2.2357E-18 94697 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 137.16 112.87 1478100000 21753000 1408300000 0 1406700 1282700 1773200 1790000 2150000 1012600 0 5998600 6721300 1521900 6103000 18264000 19309 3779 17599 161979;161980;161981;161982;161983;161984;161985;161986;161987;161988;161989;161990;161991;161992 129101;129102;129103;129104;129105;129106;129107 129102 6 GLGTDDNTLIR Unmodified 1173.599 0.59896556 887 P09525 ANXA4 Annexin A4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 51.612 50.98 2 0.00049349 58261 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 83.456 55.574 15132000 0 0 0 15132000 0 0 0 0 0 0 0 0 0 0 0 19310 887 17600 161993;161994;161995;161996 129108;129109;129110;129111 129110 4 GLGTDEDSLIEIICSR Unmodified 1776.8564 0.85637882 840 P07355;A6NMY6 ANXA2;ANXA2P2 Annexin A2;Putative annexin A2-like protein yes no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 6.57 3.96 3 4 1 1 1 1 1 1 1 93.394 91.209 2 1.2057E-14 106397 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 114.82 98.442 39553000 7541900 24448000 497310 1948400 0 0 0 0 0 1473800 1091700 0 0 0 2551600 19311 840 17601 161997;161998;161999;162000;162001;162002;162003 129112;129113;129114;129115;129116;129117;129118 129115 7 GLGTDEDTLIEILASRTNK Unmodified 2045.0641 0.064063405 773 P04083 ANXA1 Annexin A1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 95.731 91.067 3 5.3042E-55 114218 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.12 98.315 200010000 126960000 71645000 1401400 0 0 0 0 0 0 0 0 0 0 0 0 19312 773 17602 162004;162005;162006;162007 129119;129120;129121 129119 3 GLGTETAEFAELK Unmodified 1364.6824 0.68236084 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching 2.25 0.433 3 1 1 2 1 76.853 72.026 2 1.4594E-25 90768 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 158.79 126.16 528090000 15636000 496580000 15869000 0 0 0 0 0 0 0 0 0 0 0 0 19313 1286 17603 162008;162009;162010;162011 129122;129123;129124 129122 3 GLGTGQGAVSGPPR Unmodified 1252.6524 0.65239812 133 O00255 MEN1 Menin yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 34.004 34.271 2 0.00087811 36621 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.894 54.676 38052000 0 0 0 0 2418100 2764800 0 0 2620000 3088800 4408700 6766200 5061900 4322400 6601200 19314 133 17604 162012;162013;162014;162015;162016;162017;162018;162019;162020 129125;129126;129127;129128 129125 4 GLGTGTLYIAESR Unmodified 1336.6987 0.69867961 1731 P54105 CLNS1A Methylosome subunit pICln yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.873 67.955 2 1.0265E-12 77340 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 159.83 127.51 430920000 0 0 0 12427000 21239000 22848000 24417000 20432000 19839000 29725000 58925000 52008000 38617000 43567000 86875000 19315 1731 17605 162021;162022;162023;162024;162025;162026;162027;162028;162029;162030;162031;162032 129129;129130;129131;129132;129133;129134;129135;129136;129137;129138;129139;129140;129141 129133 13 GLGTQAPHTVLR Unmodified 1248.6939 0.693869 3309 Q8N196 SIX5 Homeobox protein SIX5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 38.432 38.596 3 0.0073036 42874 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 45.257 29.718 84092000 0 0 0 8962400 3889000 11069000 7796200 6477000 5507900 5146100 9426400 9529300 0 7948200 8340600 19316 3309 17606 162033;162034;162035;162036;162037;162038;162039;162040;162041;162042;162043 129142 129142 1 GLGVDSVDK Unmodified 888.45526 0.45526144 3723 Q969S3 ZNF622 Zinc finger protein 622 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 31.539 31.347 2 0.0074224 38833 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.909 41.384 270990000 0 134310000 0 8881700 8161200 8342100 9379400 10297000 8167100 10190000 16016000 16873000 13292000 10440000 16636000 19317 3723 17607 162044;162045;162046;162047;162048;162049;162050;162051;162052;162053;162054;162055;162056 129143;129144;129145;129146;129147;129148 129144 6 GLGVEIAK Unmodified 785.4647 0.46470391 1137 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 43.982 44.221 2 0.011827 49749 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 76.035 34.732 479670000 0 0 0 0 11886000 47924000 28757000 23182000 18203000 35568000 51649000 55593000 32371000 58607000 115930000 19318 1137 17608 162057;162058;162059;162060;162061;162062;162063;162064;162065;162066;162067 129149;129150;129151;129152;129153;129154;129155;129156;129157;129158;129159;129160;129161;129162;129163;129164 129152 16 GLGVGFGSGGGSSSSVK Unmodified 1438.7052 0.70522155 74 CON__P13647;P13647 KRT5 Keratin, type II cytoskeletal 5 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 51.237 51.137 2 5.6882E-37 58501 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 163.99 156.07 + 539560000 0 0 0 249820000 20789000 0 0 77880000 0 0 0 0 164800000 26264000 0 19319 74 17609 162068;162069;162070;162071;162072;162073 129165;129166;129167;129168;129169;129170;129171;129172;129173;129174 129172 10 GLHGPYPFGQS Unmodified 1158.5458 0.54580778 4417 Q9H6K1 C6orf106 Uncharacterized protein C6orf106 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 68.425 62.415 2 0.0080976 82985 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.364 83.364 142580000 120980000 0 21595000 0 0 0 0 0 0 0 0 0 0 0 0 19320 4417 17610 162074;162075 129175;129176;129177 129175 3 GLHQSIEEFR Unmodified 1214.6044 0.60438529 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 42.802 43.039 3 0.0083542 47316 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 51.436 38.558 120520000 0 0 0 7338900 0 9223300 7417500 8006500 8739300 10137000 14880000 16604000 10601000 12289000 15287000 19321 2501 17611 162076;162077;162078;162079;162080;162081;162082;162083;162084;162085;162086 129178;129179 129179 2 GLHVVEVTYDDVPIPNSPFK Unmodified 2225.1368 0.13683442 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS 2 0 1 1 92.035 83.904 3 7.8258E-07 108736 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.82 64.015 31527000 31527000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19322 487 17612 162087 129180 129180 1 GLIDYETFK Unmodified 1084.5441 0.54407645 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72.937 72.064 2 0.0071283 83194 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 73.248 54.466 851810000 8941200 25338000 0 143910000 42269000 41102000 46194000 215380000 35017000 51073000 43081000 81215000 49276000 33273000 35744000 19323 1029 17613 162088;162089;162090;162091;162092;162093;162094;162095;162096;162097;162098;162099;162100;162101 129181;129182;129183;129184;129185;129186;129187;129188;129189;129190;129191;129192;129193;129194;129195;129196 129182 15 GLIEGSAQYR Unmodified 1092.5564 0.55637247 705 O95905 ECD Protein SGT1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 40.155 40.33 2 0.0077624 45020 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 61.679 41.054 133740000 0 0 0 7855600 5096000 12395000 0 9273700 7913000 12304000 13227000 27215000 0 14349000 24108000 19324 705 17614 162102;162103;162104;162105;162106;162107;162108;162109;162110;162111 129197;129198;129199;129200;129201 129199 1 GLIHPDDSVK Unmodified 1079.5611 0.56112349 2602 Q16401 PSMD5 26S proteasome non-ATPase regulatory subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 29.751 29.989 2 0.00089969 31819 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 116.37 82.976 115550000 0 0 0 0 4914400 7142400 6166900 5516700 3592900 10453000 14081000 14970000 10769000 11937000 26011000 19325 2602 17615 162112;162113;162114;162115;162116;162117;162118;162119;162120;162121;162122 129202;129203;129204;129205;129206;129207;129208;129209;129210;129211;129212;129213;129214;129215 129214 14 GLILPVR Unmodified 766.50651 0.50650915 4724 Q9NXF1 TEX10 Testis-expressed sequence 10 protein yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 67.635 67.802 2 0.026997 78107 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 77.906 0 4817600 0 0 0 0 0 0 0 0 0 0 0 0 2505500 2312100 0 19326 4724 17616 162123;162124 129216 129216 1 GLIPAGTQHSMIATTGK Unmodified 1681.8821 0.88214006 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 2 1 2 2 2 2 2 1 2 2 2 58.922 59.056 2;3 0.0020097 67152 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 56.851 50.414 197900000 0 0 0 9784900 10202000 12744000 12083000 13285000 11801000 19187000 27604000 14575000 16701000 17320000 32615000 19327 5216 17617 162125;162126;162127;162128;162129;162130;162131;162132;162133;162134;162135;162136;162137;162138;162139;162140;162141;162142;162143;162144;162145 129217;129218;129219;129220;129221;129222;129223;129224;129225;129226;129227 129221 9 GLIPAGTQHSMIATTGK Oxidation (M) 1697.8771 0.87705468 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 47.373 47.389 3 0.00026105 52928 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 52.862 30.284 42083000 0 0 0 11232000 0 8991500 0 0 9784300 0 12075000 0 0 0 0 19328 5216 17617 162146;162147;162148;162149 129228 129228 6619 1 GLIPVFALGR Unmodified 1041.6335 0.63350058 4963 Q9UKF6 CPSF3 Cleavage and polyadenylation specificity factor subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 90.059 90.204 2 0.016806 104476 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.325 35.817 18808000 0 0 0 0 0 3715400 1311900 0 2156500 2352200 446300 0 0 0 8825300 19329 4963 17618 162150;162151;162152;162153;162154;162155 129229 129229 1 GLIPWEQAAR Unmodified 1139.6087 0.60874239 1802 P58107 EPPK1 Epiplakin yes yes 0 0 0 By MS/MS 10 0 1 1 76.98 76.484 2 0.040161 88737 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 40.002 19.303 3052800 0 0 0 3052800 0 0 0 0 0 0 0 0 0 0 0 19330 1802 17619 162156 129230 129230 1 GLIQQFTTITGASESVGK Unmodified 1835.9629 0.9628928 598 O94888 UBXN7 UBX domain-containing protein 7 yes yes 0 0 0 By MS/MS 2 0 2 2 91.463 83.333 2;3 1.0608E-10 108087 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 106.29 92.484 39802000 39802000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19331 598 17620 162157;162158 129231;129232 129232 2 GLIVYCVTSPK Unmodified 1235.6584 0.6583947 3520 Q8TEU7 RAPGEF6 Rap guanine nucleotide exchange factor 6 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 69.364 69.34 2 0.013991 79618 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 46.001 30.741 6895500 0 0 0 0 841250 0 1778500 0 0 1759000 0 0 2516700 0 0 19332 3520 17621 162159;162160;162161;162162 129233;129234;129235 129233 3 GLIVYQLENQPSEFR Unmodified 1791.9155 0.91554867 1981 P78406 RAE1 mRNA export factor yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 21 1 2 1 2 2 2 2 2 2 2 2 1 82.525 82.604 2;3 8.7561E-05 95540 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 93.258 75.449 209360000 0 0 0 1952600 6201100 13566000 10979000 16609000 18340000 28592000 22100000 31156000 12611000 21812000 25445000 19333 1981 17622 162163;162164;162165;162166;162167;162168;162169;162170;162171;162172;162173;162174;162175;162176;162177;162178;162179;162180;162181;162182;162183 129236;129237;129238 129236 3 GLLAAAPGLGPR Unmodified 1091.6451 0.64512789 3477 Q8TB03 CXorf38 Uncharacterized protein CXorf38 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 71.055 71.253 2 0.00087576 81809 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.248 53.612 34295000 0 0 0 0 0 3641300 5587900 2119200 0 0 0 5465800 5088100 3598700 8794200 19334 3477 17623 162184;162185;162186;162187;162188;162189;162190 129239;129240;129241;129242;129243 129243 5 GLLAGNVFDWGAK Unmodified 1346.6983 0.69828568 4666 Q9NVE7 PANK4 Pantothenate kinase 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 89.078 88.913 2 0.0003348 103016 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 96.89 84.363 14599000 0 0 0 1309300 4282100 9007300 0 0 0 0 0 0 0 0 0 19335 4666 17624 162191;162192;162193 129244;129245;129246 129244 3 GLLAQGLRPESPPPAGPLLNGAPAGESPQPK Unmodified 3015.6142 0.6141687 4003 Q96TA1 FAM129B Niban-like protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 80.9 81.042 3 1.0858E-19 93658 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 52.669 46.374 46049000 0 0 0 0 0 9260300 0 4205800 0 9493200 4495700 0 0 0 18594000 19336 4003 17625 162194;162195;162196;162197;162198 129247;129248;129249;129250 129248 4 GLLATSLLPR Unmodified 1039.639 0.63897988 4211 Q9BWH6 RPAP1 RNA polymerase II-associated protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 82.35 82.419 2 0.0047532 95461 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 71.692 53.289 21571000 0 0 0 909990 0 2775300 0 2395000 0 2489600 1754600 1659900 0 3119300 6467200 19337 4211 17626 162199;162200;162201;162202;162203;162204;162205;162206 129251;129252;129253;129254 129251 4 GLLDNPISEK Unmodified 1084.5764 0.57643921 3453 Q8NG31 CASC5 Protein CASC5 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 67.958 62.665 2 0.0033888 76276 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 95.502 61.249 27108000 0 27108000 0 0 0 0 0 0 0 0 0 0 0 0 0 19338 3453 17627 162207;162208 129255 129255 1 GLLDQNGFTADDINK Unmodified 1619.7791 0.77911477 2175 Q0VDF9 HSPA14 Heat shock 70 kDa protein 14 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 74.404 74.647 2 1.4614E-07 85562 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 109.24 93.346 13393000 0 0 0 0 0 0 0 0 0 0 0 0 0 5433000 7959600 19339 2175 17628 162209;162210 129256;129257 129256 2 GLLDVLPK Unmodified 853.5273 0.52730417 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.311 81.371 2 0.02509 94032 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 58.981 26.511 186860000 0 0 0 8764900 9012200 11760000 10237000 11495000 13190000 18356000 17611000 18363000 16927000 18150000 32996000 19340 619 17629 162211;162212;162213;162214;162215;162216;162217;162218;162219;162220;162221;162222 129258;129259;129260;129261;129262;129263;129264;129265;129266;129267 129259 10 GLLDVTCK Unmodified 904.4688 0.46880301 1946 P63208 SKP1 S-phase kinase-associated protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 51.214 51.44 2 0.0068946 57913 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 91.906 48.906 921920000 0 0 0 0 35099000 11414000 61218000 0 59140000 77063000 109040000 128070000 76615000 108460000 255800000 19341 1946 17630 162223;162224;162225;162226;162227;162228;162229;162230;162231;162232 129268;129269;129270;129271;129272;129273;129274;129275 129272 8 GLLEDVQEGR Unmodified 1114.5619 0.56185177 1802 P58107 EPPK1 Epiplakin yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.969 56.094 2 0.0028846 64550 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 79.128 60.149 50758000 0 0 0 4498400 3592400 4582000 3152300 4018300 2122700 3958800 5144700 8600100 4987400 2658800 3442600 19342 1802 17631 162233;162234;162235;162236;162237;162238;162239;162240;162241;162242;162243;162244 129276;129277;129278;129279;129280;129281;129282;129283 129283 8 GLLEEQVAEK Unmodified 1114.587 0.58700389 5339 yes yes 0 0 0 By MS/MS 10 0 1 1 43.788 44.131 2 0.046497 49526 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 53.089 2.9624 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19343 5339 17632 162245 129284 129284 1 GLLEFEHQR Unmodified 1127.5724 0.57235688 2441 Q14697 GANAB Neutral alpha-glucosidase AB yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 50.457 50.92 2 0.022041 56327 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.809 47.455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19344 2441 17633 162246;162247 129285;129286 129285 2 GLLEMMETDEK 2 Oxidation (M) 1326.5683 0.56831864 3180 Q86W92 PPFIBP1 Liprin-beta-1 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 21 2 2 2 2 3 2 2 2 2 2 35.709 35.956 2 0.00047064 39495 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 72.643 58.436 105060000 0 0 0 8626200 0 9889200 9410100 0 9067500 12589000 9721400 14874000 13142000 7791100 9945400 19345 3180 17634 162248;162249;162250;162251;162252;162253;162254;162255;162256;162257;162258;162259;162260;162261;162262;162263;162264;162265;162266;162267;162268 129287;129288;129289;129290;129291;129292;129293;129294;129295;129296;129297;129298 129297 4798;4799 11 GLLEMMETDEK Oxidation (M) 1310.5734 0.57340402 3180 Q86W92 PPFIBP1 Liprin-beta-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 2 2 1 1 2 2 2 1 2 2 63.29 63.4 2 0.00041092 72049 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 79.148 61.712 99933000 0 0 0 4098900 5638100 5252700 7479500 5681200 2786400 14848000 17358000 8435400 4242600 8905700 15206000 19346 3180 17634 162269;162270;162271;162272;162273;162274;162275;162276;162277;162278;162279;162280;162281;162282;162283;162284;162285;162286;162287;162288;162289 129299;129300;129301;129302;129303;129304;129305;129306;129307;129308;129309;129310;129311;129312;129313;129314;129315;129316;129317;129318;129319 129313 4798;4799 19 GLLEMMETDEK Unmodified 1294.5785 0.5784894 3180 Q86W92 PPFIBP1 Liprin-beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 77.544 77.729 2 0.00031818 89200 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 103.7 83.371 54934000 0 0 0 0 0 0 0 8237800 0 0 8895300 10253000 3521300 0 24027000 19347 3180 17634 162290;162291;162292;162293;162294 129320;129321;129322;129323;129324 129320 5 GLLETTVQK Unmodified 987.56006 0.56006086 312 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 44.72 43.449 2 0.0036746 48916 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 89.296 44.529 363780000 4317200 121640000 6339300 12886000 11445000 11934000 16399000 20595000 13917000 20734000 23476000 29947000 21860000 22351000 25935000 19348 312 17635 162295;162296;162297;162298;162299;162300;162301;162302;162303;162304;162305;162306;162307;162308;162309;162310 129325;129326;129327;129328;129329;129330;129331;129332;129333;129334;129335;129336;129337;129338;129339 129325 10 GLLGCNIIPLQR Unmodified 1352.7598 0.75984008 131 O00233 PSMD9 26S proteasome non-ATPase regulatory subunit 9 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 83.875 84.054 2 2.4951E-05 97018 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.143 78.936 22735000 0 0 0 0 0 0 0 0 4226900 0 3226600 5527900 0 0 9753700 19349 131 17636 162311;162312;162313;162314 129340;129341 129340 2 GLLGDAPNDPR Unmodified 1123.5622 0.56218613 1329;4333 P33240;Q9H0L4 CSTF2;CSTF2T Cleavage stimulation factor subunit 2;Cleavage stimulation factor subunit 2 tau variant no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.811 45.981 2 0.0034755 51467 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 63.816 43.513 299630000 0 0 0 12252000 11890000 17285000 21148000 17486000 13788000 26082000 32582000 40306000 29674000 33071000 44065000 19350 1329;4333 17637 162315;162316;162317;162318;162319;162320;162321;162322;162323;162324;162325;162326 129342;129343;129344;129345;129346;129347 129344 3 GLLGLPEEETELDNLTEFNTAHNK Unmodified 2683.2977 0.29770475 2217 Q12972 PPP1R8 Nuclear inhibitor of protein phosphatase 1;Activator of RNA decay yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 94.231 89.552 3 6.4484E-12 112730 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.272 74.29 68524000 30581000 34491000 3452000 0 0 0 0 0 0 0 0 0 0 0 0 19351 2217 17638 162327;162328;162329;162330 129348;129349;129350;129351 129350 4 GLLGMCVGEK Unmodified 1062.5202 0.52018666 640 O95302 FKBP9 Peptidyl-prolyl cis-trans isomerase FKBP9 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 72.23 65.223 2 0.020066 83410 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.711 39.817 41425000 23619000 17807000 0 0 0 0 0 0 0 0 0 0 0 0 0 19352 640 17639 162331;162332 129352 129352 1 GLLGMCVGEK Oxidation (M) 1078.5151 0.51510128 640 O95302 FKBP9 Peptidyl-prolyl cis-trans isomerase FKBP9 yes yes 0 1 0 By MS/MS 3 0 1 1 49.015 44.126 2 0.028304 54655 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 57.96 39.229 8997400 0 8997400 0 0 0 0 0 0 0 0 0 0 0 0 0 19353 640 17639 162333 129353 129353 1 GLLLAPGCLPSEEPR Unmodified 1607.8341 0.83412723 2798 Q5TGY1 TMCO4 Transmembrane and coiled-coil domain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 80.753 80.801 2 9.7283E-15 93529 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 103.34 78.55 143810000 0 0 0 6386500 10824000 13823000 13232000 19383000 11902000 17064000 0 6209300 14245000 15283000 15456000 19354 2798 17640 162334;162335;162336;162337;162338;162339;162340;162341;162342;162343;162344 129354;129355;129356;129357;129358;129359;129360;129361;129362;129363 129363 10 GLLLDTSR Unmodified 873.49198 0.4919813 832 P06865 HEXA Beta-hexosaminidase subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 45.573 45.565 2 0.040979 49847 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 50.127 0 37621000 0 0 0 9835800 0 5724000 5138000 9973700 0 0 0 0 0 6949800 0 19355 832 17641 162345;162346;162347;162348;162349 129364 129364 1 GLLLPPPMK Unmodified 964.57796 0.57795953 437 O60841 EIF5B Eukaryotic translation initiation factor 5B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 76.695 76.838 2 0.012783 88756 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 60.788 28.317 20055000 0 0 0 0 0 2103000 0 1144900 0 3584300 4968300 0 1362800 0 6891300 19356 437 17642 162350;162351;162352;162353;162354;162355 129365;129366;129367;129368;129369;129370 129366 6 GLLLPPPMK Oxidation (M) 980.57287 0.57287415 437 O60841 EIF5B Eukaryotic translation initiation factor 5B yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 61.216 61.303 2 0.030752 69283 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 42.914 29.648 46076000 0 0 0 3871500 2914900 0 4846600 0 0 7514000 7663800 5397200 5761100 0 8107000 19357 437 17642 162356;162357;162358;162359;162360;162361;162362;162363 129371;129372;129373 129372 3 GLLLSASK Unmodified 787.48035 0.48035398 4866 Q9UDX3;B5MCN3 SEC14L4;SEC14L6 SEC14-like protein 4;Putative SEC14-like protein 6 yes no 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 52.129 45.249 2 0.026272 62030 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.451 0 27382000 13576000 13805000 0 0 0 0 0 0 0 0 0 0 0 0 0 19358 4866 17643 162364;162365 129374 129374 1 GLLLYGPPGTGK Unmodified 1171.6601 0.66010926 3287 Q8IYT4 KATNAL2 Katanin p60 ATPase-containing subunit A-like 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 70.669 70.694 2 3.6812E-05 81333 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 90.906 0 235580000 0 0 0 15278000 10477000 20078000 14863000 12371000 11294000 28045000 54372000 47782000 21019000 0 0 19359 3287 17644 162366;162367;162368;162369;162370;162371;162372;162373;162374;162375 129375;129376;129377;129378;129379;129380;129381;129382;129383;129384 129379 9 GLLNAIVIK Unmodified 939.6117 0.6117025 777 P04181 OAT Ornithine aminotransferase, mitochondrial;Ornithine aminotransferase, hepatic form;Ornithine aminotransferase, renal form yes yes 0 0 0 By MS/MS 2 0 1 1 89.305 81.175 2 0.029509 105547 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.032 49.646 3110900 3110900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19360 777 17645 162376 129385 129385 1 GLLNGASQK Unmodified 886.48723 0.48723027 2528 Q15393 SF3B3 Splicing factor 3B subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.479 23.684 2 0.0050805 24836 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 84.227 36.478 385710000 0 0 0 14586000 18476000 19676000 21447000 19489000 14353000 34017000 37839000 56963000 40633000 42098000 66132000 19361 2528 17646 162377;162378;162379;162380;162381;162382;162383;162384;162385;162386;162387;162388 129386;129387;129388;129389;129390;129391;129392;129393;129394;129395;129396 129392 11 GLLPEELTPLILATQK Unmodified 1735.0131 0.013137454 988 P13804 ETFA Electron transfer flavoprotein subunit alpha, mitochondrial yes yes 0 0 0 By MS/MS 2.25 0.433 3 1 4 99.806 95.434 2;3 0.00055683 117838 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.326 54.756 31897000 0 31897000 0 0 0 0 0 0 0 0 0 0 0 0 0 19362 988 17647 162389;162390;162391;162392 129397;129398;129399;129400 129397 2 GLLPEPNPVQIMK Oxidation (M) 1450.7854 0.78538612 4516 Q9HCJ3 RAVER2 Ribonucleoprotein PTB-binding 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 76.507 76.546 2 0.00048067 88321 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 71.451 64.3 122820000 0 0 0 7843900 12077000 14449000 0 13470000 13362000 0 15062000 21773000 0 12318000 12469000 19363 4516 17648 162393;162394;162395;162396;162397;162398;162399;162400;162401 129401;129402;129403;129404;129405;129406;129407;129408 129407 5942 8 GLLPEPNPVQIMK Unmodified 1434.7905 0.7904715 4516 Q9HCJ3 RAVER2 Ribonucleoprotein PTB-binding 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 83.975 84.085 2 0.0020419 97232 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 56.432 36.128 12494000 0 0 0 0 0 6133800 0 6360500 0 0 0 0 0 0 0 19364 4516 17648 162402;162403;162404 129409;129410;129411;129412 129412 4 GLLPTPDEFPR Unmodified 1240.6452 0.64518747 4293 Q9C0J8 WDR33 pre-mRNA 3' end processing protein WDR33 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.821 80.881 2 0.0010566 93377 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 75.378 62.851 50283000 0 0 0 1931900 2562700 5383400 3123300 3569900 3850800 4940300 4145600 5820800 4737800 4226400 5989600 19365 4293 17649 162405;162406;162407;162408;162409;162410;162411;162412;162413;162414;162415;162416 129413;129414;129415;129416;129417;129418;129419;129420;129421 129415 9 GLLPVLGQPIIR Unmodified 1274.8074 0.8074422 2285 Q13421 MSLN Mesothelin;Megakaryocyte-potentiating factor;Mesothelin, cleaved form yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 90.689 90.798 2 0.0036542 105148 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.8 56.804 19001000 0 0 0 0 598750 1469500 449890 1023400 1462400 2644900 1537200 3015800 0 1282700 5516800 19366 2285 17650 162417;162418;162419;162420;162421;162422;162423;162424;162425;162426 129422;129423;129424;129425 129423 4 GLLQGEALSEGGRR Unmodified 1441.7637 0.76373948 3588 Q8WXE0 CASKIN2 Caskin-2 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 46.788 47.023 3 0.0028415 52875 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 30.998 15.967 72383000 0 0 0 0 2455900 9213600 5288900 5834200 4074800 8483500 6171000 8420300 7368800 4973500 10098000 19367 3588 17651 162427;162428;162429;162430;162431;162432;162433;162434;162435;162436;162437 129426;129427;129428;129429;129430;129431;129432 129430 6 GLLQSGQIPGR Unmodified 1124.6302 0.63020611 892 P09661 SNRPA1 U2 small nuclear ribonucleoprotein A' yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 54.413 54.548 2 0.0019825 62056 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 69.812 44.889 623210000 0 0 0 38551000 32902000 38423000 38856000 32505000 29337000 55737000 61172000 79684000 57088000 55412000 103540000 19368 892 17652 162438;162439;162440;162441;162442;162443;162444;162445;162446;162447;162448;162449 129433;129434;129435;129436;129437;129438;129439;129440;129441;129442;129443;129444 129439 10 GLLQSGQIPGRER Unmodified 1409.7739 0.77391024 892 P09661 SNRPA1 U2 small nuclear ribonucleoprotein A' yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.338 46.504 3 6.4176E-05 52366 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 85.554 60.834 726510000 0 0 0 31343000 31436000 49683000 48214000 37811000 49234000 61197000 78368000 68198000 85850000 75693000 109490000 19369 892 17653 162450;162451;162452;162453;162454;162455;162456;162457;162458;162459;162460;162461 129445;129446;129447;129448;129449;129450;129451;129452;129453;129454;129455;129456;129457;129458;129459 129446 12 GLLQTEPQNNQAK Unmodified 1439.7369 0.73685603 5161 Q9Y3D6 FIS1 Mitochondrial fission 1 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.015 35.196 2 8.6469E-271 37404 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 251.53 236.85 1500900000 0 0 0 96800000 74826000 99210000 142950000 116690000 78943000 103290000 169530000 118760000 168020000 114090000 217760000 19370 5161 17654 162462;162463;162464;162465;162466;162467;162468;162469;162470;162471;162472;162473 129460;129461;129462;129463;129464;129465;129466;129467;129468;129469;129470;129471;129472;129473;129474;129475 129465 16 GLLSDSMTDVPVDTGVAAR Oxidation (M) 1918.9306 0.93060639 325 O43399 TPD52L2 Tumor protein D54 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.29 2.21 1 1 19 2 1 2 2 2 2 1 2 1 2 1 2 1 74.227 73.89 2;3 7.3893E-125 85075 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 194.12 187.08 1501200000 0 33742000 0 55832000 105970000 123170000 103080000 102230000 87417000 142470000 140160000 259490000 109000000 108810000 129810000 19371 325 17655 162474;162475;162476;162477;162478;162479;162480;162481;162482;162483;162484;162485;162486;162487;162488;162489;162490;162491;162492;162493;162494 129476;129477;129478;129479;129480;129481;129482;129483;129484;129485;129486;129487;129488;129489;129490;129491;129492;129493;129494;129495;129496 129478 415 14 GLLSDSMTDVPVDTGVAAR Unmodified 1902.9357 0.93569177 325 O43399 TPD52L2 Tumor protein D54 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.4 2.04 1 1 23 1 1 2 2 2 1 2 2 2 2 2 2 2 2 81.254 81.077 2;3 3.6989E-271 93428 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 241.84 186.44 744240000 0 8660900 1729600 10899000 40400000 42776000 20509000 65123000 42222000 77102000 81437000 101210000 40516000 60422000 151240000 19372 325 17655 162495;162496;162497;162498;162499;162500;162501;162502;162503;162504;162505;162506;162507;162508;162509;162510;162511;162512;162513;162514;162515;162516;162517;162518;162519 129497;129498;129499;129500;129501;129502;129503;129504;129505;129506;129507;129508;129509;129510;129511;129512;129513 129501 16 GLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTK Oxidation (M) 4215.074 0.074042329 325 O43399 TPD52L2 Tumor protein D54 yes yes 0 1 2 By MS/MS 2 0 1 1 96.331 88.201 4 1.0925E-44 113927 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.767 71.027 64006000 64006000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19373 325 17656 162520 129514 129514 415 1 GLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTK Unmodified 4199.0791 0.079127707 325 O43399 TPD52L2 Tumor protein D54 yes yes 0 0 2 By MS/MS 2 0 1 1 96.941 88.81 5 6.7783E-15 114675 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.096 44.32 85963000 85963000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19374 325 17656 162521 129515 129515 1 GLLSGQTSPTNAK Unmodified 1272.6674 0.66737948 3719 Q969J3 LOH12CR1 Loss of heterozygosity 12 chromosomal region 1 protein yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 37.79 36.747 2 8.4282E-09 48052 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.22 77.308 57573000 29156000 7046600 0 0 0 0 1690000 2609000 0 2407700 0 4120600 3170700 2497200 4875300 19375 3719 17657 162522;162523;162524;162525;162526;162527;162528;162529;162530 129516;129517 129516 1 GLLSPPMGQSGLR Unmodified 1311.6969 0.69690547 3155 Q86UU0 BCL9L B-cell CLL/lymphoma 9-like protein yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 72.077 72.401 2 0.0084927 83359 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 40.727 6.4747 29056000 0 0 0 0 0 0 0 0 0 0 9070900 8174900 0 0 11810000 19376 3155 17658 162531;162532;162533 129518 129518 1 GLLSQGSPLSWEETK Unmodified 1630.8203 0.82025131 1540 P48506 GCLC Glutamate--cysteine ligase catalytic subunit yes yes 0 0 0 By MS/MS 3 0 1 1 83.568 80.317 2 0.012443 96248 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 49.632 34.488 9704000 0 9704000 0 0 0 0 0 0 0 0 0 0 0 0 0 19377 1540 17659 162534 129519 129519 1 GLLSVFPADYNPLLFTEKESGK Unmodified 2424.2577 0.25767783 5263 Q9Y620 RAD54B DNA repair and recombination protein RAD54B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.774 45.942 3 0.036155 51004 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 20.075 12.453 977990000 0 0 0 55596000 71218000 87342000 86988000 73077000 65278000 101680000 100490000 120060000 73149000 80859000 62257000 19378 5263 17660 162535;162536;162537;162538;162539;162540;162541;162542;162543;162544;162545;162546 129520 129520 1 GLLTQLSEAK Unmodified 1058.5972 0.59717465 401 O60447 EVI5 Ecotropic viral integration site 5 protein homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 8.23 3.24 2 1 10 1 1 1 1 1 1 1 1 1 1 1 1 1 67.714 66.535 2 0.0015844 89834 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.22 67.349 49388000 24187000 3519800 1647500 1444200 1181500 1727200 1848800 1458100 1514100 2811900 2309500 0 2432400 3306600 0 19379 401 17661 162547;162548;162549;162550;162551;162552;162553;162554;162555;162556;162557;162558;162559 129521;129522;129523;129524 129522 4 GLLVDRPSETK Unmodified 1213.6667 0.6666512 4976 Q9UKV3 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.246 34.429 2 0.0060108 37046 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 106.2 65.212 66501000 0 0 0 2441200 2019600 3564200 4018100 4070700 5019600 4691600 5689000 9838100 5959800 8844500 10345000 19380 4976 17662 162560;162561;162562;162563;162564;162565;162566;162567;162568;162569;162570;162571 129525;129526;129527 129527 2 GLMGEANIR Oxidation (M) 975.48076 0.48076468 5245 Q9Y5Q9 GTF3C3 General transcription factor 3C polypeptide 3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 27.634 27.8 2 0.0072069 29880 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 63.565 38.642 17665000 0 0 0 0 0 5573100 6084200 0 0 0 6007300 0 0 0 0 19381 5245 17663 162572;162573;162574 129528;129529;129530 129528 6648 3 GLMGEANIR Unmodified 959.48585 0.48585006 5245 Q9Y5Q9 GTF3C3 General transcription factor 3C polypeptide 3 yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 44.397 44.531 2 0.012712 48849 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.895 23.92 17228000 0 0 0 0 2275500 0 0 3826800 0 0 0 0 0 0 11126000 19382 5245 17663 162575;162576;162577 129531;129532 129531 2 GLMGPLTELDTK Oxidation (M) 1289.6537 0.65370325 512 O75528 TADA3 Transcriptional adapter 3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By matching 8.77 2.89 2 11 2 1 1 1 1 1 1 1 1 1 1 1 71.116 71.181 2 0.00074873 81681 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 70.363 55.212 49013000 0 0 0 3433100 4110700 4995400 3538300 2182500 0 6371200 5020000 8662000 3509700 2667200 4522900 19383 512 17664 162578;162579;162580;162581;162582;162583;162584;162585;162586;162587;162588;162589;162590 129533;129534;129535;129536;129537;129538;129539;129540;129541 129534 661 9 GLMGPLTELDTK Unmodified 1273.6588 0.65878863 512 O75528 TADA3 Transcriptional adapter 3 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 80.37 80.411 2 0.0046222 93060 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.103 50.41 35319000 0 0 0 1337600 2661200 3408000 1322900 2134800 1720200 5864000 5760900 7407700 0 3701600 0 19384 512 17664 162591;162592;162593;162594;162595;162596;162597;162598;162599;162600;162601 129542;129543;129544;129545 129544 4 GLMLVHNK Oxidation (M) 926.50077 0.50077184 1514 P46926 GNPDA1 Glucosamine-6-phosphate isomerase 1 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 30.614 25.558 2 0.0024327 35569 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 127.1 98.199 158770000 138690000 20084000 0 0 0 0 0 0 0 0 0 0 0 0 0 19385 1514 17665 162602;162603 129546 129546 2394 1 GLMLVHNK Unmodified 910.50586 0.50585722 1514 P46926 GNPDA1 Glucosamine-6-phosphate isomerase 1 yes yes 0 0 0 By MS/MS 2 0 1 1 41.202 34.521 2 0.010443 47650 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 112.56 81.255 43911000 43911000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19386 1514 17665 162604 129547 129547 1 GLMPDGTSRFTCK Unmodified 1468.6803 0.68026913 955 P11766 ADH5 Alcohol dehydrogenase class-3 yes yes 0 0 1 By MS/MS 2 0 1 1 60.827 52.586 3 0.00028277 71395 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.881 63.311 24706000 24706000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19387 955 17666 162605 129548 129548 1 GLMSQLEEK Oxidation (M) 1049.5063 0.50631073 4199 Q9BW19 KIFC1 Kinesin-like protein KIFC1 yes yes 0 1 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 29.621 29.809 2 0.012977 32173 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 53.754 35.024 26936000 0 0 0 2314800 0 2183900 2274400 1644100 3097000 2834600 2535500 4317900 5734100 0 0 19388 4199 17667 162606;162607;162608;162609;162610;162611;162612;162613;162614 129549;129550 129550 5675 2 GLMSQLEEK Unmodified 1033.5114 0.51139611 4199 Q9BW19 KIFC1 Kinesin-like protein KIFC1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 52.035 52.362 2 0.0086707 59097 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 68.95 34.947 27444000 0 0 0 0 0 0 5155400 4795900 0 0 4160300 8566100 4766100 0 0 19389 4199 17667 162615;162616;162617;162618;162619;162620 129551;129552;129553;129554 129553 4 GLMSSGMSQLIGLK 2 Oxidation (M) 1452.7316 0.73163599 2346 Q13835 PKP1 Plakophilin-1 yes yes 0 2 0 By MS/MS By MS/MS 10 0 2 1 1 63.062 62.804 2 0.00012735 72416 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 72.434 63.476 35610000 0 0 0 6376000 0 0 0 29234000 0 0 0 0 0 0 0 19390 2346 17668 162621;162622 129555;129556 129556 3814;3815 2 GLMSSGMSQLIGLK Oxidation (M) 1436.7367 0.73672137 2346 Q13835 PKP1 Plakophilin-1 yes yes 0 1 0 By MS/MS 10 0 1 1 79.374 79.563 2 0.001599 91883 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 50.791 33.321 9667400 0 0 0 0 0 0 0 9667400 0 0 0 0 0 0 0 19391 2346 17668 162623 129557 129557 3814;3815 1 GLMVLELPK Oxidation (M) 1014.5784 0.57835346 4023 Q99567 NUP88 Nuclear pore complex protein Nup88 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77.177 77.036 2 0.0033397 88808 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 84.568 84.568 247610000 0 0 11070000 11850000 14020000 14844000 16646000 24083000 14261000 23976000 16011000 25932000 20671000 26375000 27866000 19392 4023 17669 162624;162625;162626;162627;162628;162629;162630;162631;162632;162633;162634;162635;162636;162637;162638 129558;129559;129560;129561;129562;129563;129564;129565;129566;129567;129568;129569;129570;129571;129572 129559 5527 15 GLMVLELPK Unmodified 998.58344 0.58343884 4023 Q99567 NUP88 Nuclear pore complex protein Nup88 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.43 2.06 1 13 1 1 1 1 1 1 1 1 1 1 1 1 2 84.009 83.496 2 0.0074164 96450 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.485 72.485 167020000 23762000 0 0 2587800 3792900 5089800 6440300 19679000 5760700 13118000 9741100 16783000 10598000 13566000 36105000 19393 4023 17669 162639;162640;162641;162642;162643;162644;162645;162646;162647;162648;162649;162650;162651;162652 129573;129574;129575;129576;129577;129578;129579;129580;129581 129574 9 GLNDFQCWEK Unmodified 1295.5605 0.56047157 4120 Q9BRX5 GINS3 DNA replication complex GINS protein PSF3 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 72.744 67.708 2 0.014085 82409 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 78.934 62.731 31810000 0 31810000 0 0 0 0 0 0 0 0 0 0 0 0 0 19394 4120 17670 162653;162654 129582 129582 1 GLNISAVR Unmodified 828.48175 0.48175096 1166 P23588 EIF4B Eukaryotic translation initiation factor 4B yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 45.526 45.727 2 0.010595 50293 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 79.146 13.008 247090000 0 0 0 12964000 17683000 0 0 0 0 28868000 39738000 42617000 23244000 29718000 52258000 19395 1166 17671 162655;162656;162657;162658;162659;162660;162661;162662 129583;129584;129585;129586;129587 129586 5 GLNISAVRLPR Unmodified 1194.7197 0.71968982 1166 P23588 EIF4B Eukaryotic translation initiation factor 4B yes yes 0 0 1 By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 70.287 70.534 3 0.0078679 80326 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.148 21.339 27050000 0 0 0 0 0 0 0 2422700 2692900 1878100 0 6372700 0 2652800 11031000 19396 1166 17672 162663;162664;162665;162666;162667;162668 129588;129589 129588 2 GLNLTTPGESDGFCANK Unmodified 1779.8098 0.80976297 1796 P57737 CORO7 Coronin-7 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 71.277 66.117 2 2.3232E-54 83979 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 152.38 136.79 55985000 0 55985000 0 0 0 0 0 0 0 0 0 0 0 0 0 19397 1796 17673 162669;162670 129590;129591 129590 2 GLNSESMTEETLK Oxidation (M) 1453.6606 0.66063912 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.55 1 1 4 2 1 1 1 1 34.084 31.225 2 1.4871E-22 39960 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 151.15 110.12 96313000 0 90883000 0 0 0 0 0 0 0 0 0 5429900 0 0 0 19398 1300 17674 162671;162672;162673;162674;162675;162676 129592;129593;129594;129595;129596 129592 1919 5 GLNSESMTEETLK Unmodified 1437.6657 0.6657245 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 54.383 47.433 2 1.8587E-21 61719 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 166.97 132.72 374930000 6565600 368360000 0 0 0 0 0 0 0 0 0 0 0 0 0 19399 1300 17674 162677;162678 129597;129598 129597 2 GLNTDELGQK Unmodified 1073.5353 0.53530267 3301 Q8N0X7 SPG20 Spartin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 32.718 32.055 2 2.4863E-16 33953 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 166.52 110.51 1409600000 6728900 308010000 0 65343000 0 76753000 86302000 112320000 71246000 96033000 123470000 154360000 119070000 88330000 101640000 19400 3301 17675 162679;162680;162681;162682;162683;162684;162685;162686;162687;162688;162689;162690;162691 129599;129600;129601;129602;129603;129604;129605;129606;129607;129608;129609;129610;129611;129612;129613 129609 15 GLNTDELGQKEEAK Unmodified 1530.7526 0.75256567 3301 Q8N0X7 SPG20 Spartin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 30.581 30.888 3 0.00071926 33013 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 49.988 32.401 46337000 0 0 0 0 0 0 7285700 0 5811300 0 0 18961000 14279000 0 0 19401 3301 17676 162692;162693;162694;162695 129614;129615;129616 129616 3 GLPAPIEK Unmodified 823.48035 0.48035398 749 P01859 IGHG2 Ig gamma-2 chain C region yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 41.953 42.071 2 0.043235 46859 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 49.325 27.623 268600000 0 0 0 60391000 5931500 0 2989500 150070000 4182400 10426000 9638700 9072900 15899000 0 0 19402 749 17677 162696;162697;162698;162699;162700;162701;162702;162703;162704 129617 129617 1 GLPDAHLGLPPGLAK Unmodified 1454.8245 0.82454882 690 O95785 WIZ Protein Wiz yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78.283 77.711 3 8.1883E-06 89795 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 79.466 70.272 129920000 29294000 0 0 4480000 5674900 10258000 6806100 9230800 5840300 8729700 9599900 12107000 6614100 6209200 15072000 19403 690 17678 162705;162706;162707;162708;162709;162710;162711;162712;162713;162714;162715;162716;162717;162718 129618;129619;129620;129621;129622;129623;129624;129625;129626;129627;129628;129629;129630 129618 13 GLPDDELEEDQFGYWK Unmodified 1939.8476 0.84758827 2097 Q03468 ERCC6 DNA excision repair protein ERCC-6 yes yes 0 0 0 By MS/MS 2 0 1 1 87.407 82.599 2 3.7252E-05 102691 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.959 79.269 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19404 2097 17679 162719 129631 129631 1 GLPDDHAGPIR Unmodified 1146.5782 0.57817054 4144 Q9BTE6 AARSD1 Alanyl-tRNA editing protein Aarsd1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 33.806 34.032 3 0.0016889 36986 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 54.259 39.115 21723000 0 0 0 0 0 4419700 0 0 2101100 0 9250100 0 0 5952200 0 19405 4144 17680 162720;162721;162722;162723 129632;129633 129632 1 GLPDNISSVLNK Unmodified 1255.6772 0.67721588 2638 Q16851 UGP2 UTP--glucose-1-phosphate uridylyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.635 76.693 2 0.00033233 88804 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 99.815 57.706 195890000 0 0 0 4912400 4549800 14869000 10214000 7553100 5241700 17387000 23576000 22193000 11931000 20676000 52791000 19406 2638 17681 162724;162725;162726;162727;162728;162729;162730;162731;162732;162733;162734;162735 129634;129635;129636;129637;129638;129639;129640;129641;129642;129643;129644;129645 129642 12 GLPEQECEQQQK Unmodified 1472.6566 0.6565568 843 P07476 IVL Involucrin yes yes 0 0 0 By MS/MS 10 0 1 1 20.315 20.169 2 0.0011685 20897 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 70.1 52.236 4122600 0 0 0 4122600 0 0 0 0 0 0 0 0 0 0 0 19407 843 17682 162736 129646 129646 1 GLPFEAENK Unmodified 1003.4975 0.4974606 4639 Q9NTZ6 RBM12 RNA-binding protein 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50.017 49.457 2 0.0035627 54794 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 108.7 75.181 953170000 0 507430000 7552800 25714000 28107000 33492000 27644000 32122000 27033000 30034000 36659000 43694000 38583000 44460000 70646000 19408 4639 17683 162737;162738;162739;162740;162741;162742;162743;162744;162745;162746;162747;162748;162749;162750 129647;129648;129649;129650;129651;129652;129653;129654;129655;129656;129657;129658 129651 8 GLPFGCSK Unmodified 864.41637 0.41637351 1309;1773;1308 P31942;P55795;P31943 HNRNPH3;HNRNPH2;HNRNPH1 Heterogeneous nuclear ribonucleoprotein H3;Heterogeneous nuclear ribonucleoprotein H2;Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 44.243 44.573 2 0.015996 48722 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.981 34.289 710830000 0 0 0 0 0 56381000 28169000 0 51444000 81141000 84426000 108100000 99793000 61918000 139460000 19409 1308;1773;1309 17684 162751;162752;162753;162754;162755;162756;162757;162758;162759 129659;129660 129659 2 GLPFGCTK Unmodified 878.43202 0.43202358 1692 P52597 HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 46.233 46.621 2 0.031953 51933 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 54.611 37.05 284650000 0 0 0 0 0 2365500 0 0 1011000 0 54254000 72107000 50103000 33819000 70989000 19410 1692 17685 162760;162761;162762;162763;162764;162765;162766 129661 129661 1 GLPFYAGLSPAGK Unmodified 1276.6816 0.68157298 3241 Q8IWI9 MGA MAX gene-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 80.514 80.551 2 0.016068 92942 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 39.785 27.258 22250000 0 0 0 1581700 1551100 2291200 1638100 2019500 1827000 3023200 0 0 1712800 2097700 4507500 19411 3241 17686 162767;162768;162769;162770;162771;162772;162773;162774;162775;162776 129662;129663;129664;129665;129666 129663 5 GLPGLLSPR Unmodified 908.54435 0.54435122 3212 Q86YV9 HPS6 Hermansky-Pudlak syndrome 6 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 69.791 69.895 2 0.025904 80469 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 50.04 15.216 27233000 0 0 0 2850400 0 2833900 3257500 3733600 0 2894300 0 3061700 2356900 2758800 3486400 19412 3212 17687 162777;162778;162779;162780;162781;162782;162783;162784;162785 129667;129668;129669 129667 3 GLPLGSAVSSPVLFSPVGR Unmodified 1839.0254 0.025433475 3548 Q8WUM0 NUP133 Nuclear pore complex protein Nup133 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 91.134 91.243 2 1.6551E-07 105941 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 98.531 93.147 26796000 0 0 0 0 1053100 2409300 1364800 2451100 1525100 3852300 2247600 3469300 0 1851800 6571900 19413 3548 17688 162786;162787;162788;162789;162790;162791;162792;162793;162794;162795 129670;129671;129672;129673;129674;129675;129676;129677;129678;129679 129671 10 GLPLTGEYYVENADGK Unmodified 1724.8257 0.82573061 2989 Q6W2J9 BCOR BCL-6 corepressor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.913 74.974 2 5.9028E-08 85995 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.19 80.425 139770000 0 0 0 7432800 7227400 12189000 9105100 9454800 9432100 14583000 13739000 15509000 13861000 10750000 16485000 19414 2989 17689 162796;162797;162798;162799;162800;162801;162802;162803;162804;162805;162806;162807 129680;129681;129682;129683;129684;129685;129686;129687;129688;129689;129690;129691;129692 129683 13 GLPLVDDGGWNTVPISK Unmodified 1766.9203 0.9202997 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 86.739 86.808 2 3.8978E-37 99917 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 161.48 148.47 1230800000 0 0 0 16100000 68554000 81065000 56006000 100260000 91280000 135560000 116740000 170110000 63801000 94837000 236530000 19415 2102 17690 162808;162809;162810;162811;162812;162813;162814;162815;162816;162817;162818;162819 129693;129694;129695;129696;129697;129698;129699;129700;129701;129702;129703;129704;129705;129706;129707;129708;129709;129710 129705 18 GLPPSNHHAVYDVPPSVSK Unmodified 2000.0116 0.011574324 1788 P56945 BCAR1 Breast cancer anti-estrogen resistance protein 1 yes yes 0 0 0 By MS/MS By matching 2 0 4 3 1 55.616 48.509 3;4 0.0029754 67651 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.876 35.501 68660000 64645000 0 4015000 0 0 0 0 0 0 0 0 0 0 0 0 19416 1788 17691 162820;162821;162822;162823 129711;129712;129713;129714 129714 3 GLPRGPEGQGLPEVETREDEEQNVK Unmodified 2762.3471 0.34711456 2712 Q567U6 CCDC93 Coiled-coil domain-containing protein 93 yes yes 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 64.167 58.139 4 0.0034263 72492 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 31.17 24.61 20363000 7903600 0 12459000 0 0 0 0 0 0 0 0 0 0 0 0 19417 2712 17692 162824;162825 129715;129716 129716 2 GLPSDYGRPLSFPPPR Unmodified 1754.9104 0.91040372 276 O15357 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 yes yes 0 0 1 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 73.852 73.993 3 0.00075105 84639 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 53.995 41.849 31009000 0 0 0 0 0 1651000 3432000 0 5762900 5597700 0 0 5422500 0 9143400 19418 276 17693 162826;162827;162828;162829;162830;162831 129717;129718;129719;129720 129718 3 GLPSPYNMSSAPGSR Oxidation (M) 1535.7038 0.70384134 1029 P15924 DSP Desmoplakin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 45.997 46.182 2 0.00013408 51339 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 69.554 65.537 99501000 0 0 0 12872000 0 9483100 9790500 0 0 11891000 12009000 15362000 19374000 8718700 0 19419 1029 17694 162832;162833;162834;162835;162836;162837;162838;162839 129721;129722;129723;129724;129725;129726;129727;129728;129729 129727 1432 8 GLPSPYNMSSAPGSR Unmodified 1519.7089 0.70892672 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.517 60.622 2 0.00022733 69034 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.624 59.204 91717000 0 0 0 6993900 4365900 5643600 6447800 11501000 3385100 8387700 9571700 11899000 5804700 6427000 11289000 19420 1029 17694 162840;162841;162842;162843;162844;162845;162846;162847;162848;162849;162850;162851 129730;129731;129732;129733;129734;129735;129736;129737;129738;129739;129740;129741;129742 129740 12 GLPVYNK Unmodified 789.43849 0.43848916 4201 Q9BW61 DDA1 DET1- and DDB1-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 36.801 31.86 2 0.038866 41779 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.716 38.997 151020000 9557500 139090000 2374400 0 0 0 0 0 0 0 0 0 0 0 0 19421 4201 17695 162852;162853;162854 129743 129743 1 GLPWQSSDQDVAR Unmodified 1457.6899 0.68990583 4424 Q9H6T0 ESRP2 Epithelial splicing regulatory protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.41 61.51 2 0.00096611 70081 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 79.693 74.352 131440000 0 0 0 5736900 8681400 6732800 8938900 11029000 5311800 12615000 15268000 13851000 10498000 11771000 21007000 19422 4424 17696 162855;162856;162857;162858;162859;162860;162861;162862;162863;162864;162865;162866 129744;129745;129746;129747;129748;129749;129750;129751;129752 129747 9 GLPWSCSADEVQR Unmodified 1503.6776 0.67762659 1309 P31943 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 63.753 63.916 2 0.00075346 73157 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 71.03 53.8 174570000 0 0 0 0 5913400 10316000 5510300 6850600 7970800 13947000 21672000 28023000 20547000 18789000 35027000 19423 1309 17697 162867;162868;162869;162870;162871;162872;162873;162874;162875;162876;162877 129753;129754;129755;129756;129757;129758;129759;129760;129761;129762 129753 10 GLQAQIASSGLTVEVDAPK Unmodified 1883 6.5851E-06 814 P05783 KRT18 Keratin, type I cytoskeletal 18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.12 0.331 14 2 2 11 3 84.63 80.059 2;3 2.2463E-180 98684 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 236.92 220.16 775670000 100320000 656960000 18392000 0 0 0 0 0 0 0 0 0 0 0 0 19424 814 17698 162878;162879;162880;162881;162882;162883;162884;162885;162886;162887;162888;162889;162890;162891;162892;162893 129763;129764;129765;129766;129767;129768;129769;129770;129771;129772;129773;129774;129775;129776;129777;129778;129779;129780;129781;129782 129764 17 GLQCGAPLSLVDLAGSER Unmodified 1841.9305 0.93054681 4199 Q9BW19 KIFC1 Kinesin-like protein KIFC1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 87.169 87.304 2 7.9245E-06 100982 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.734 87.779 15409000 0 0 0 0 0 1259400 0 1278100 0 2154600 1703800 2279000 0 1649500 5084100 19425 4199 17699 162894;162895;162896;162897;162898;162899;162900 129783;129784;129785;129786;129787;129788;129789 129784 7 GLQDSIR Unmodified 787.41882 0.41881635 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 26.912 27.072 2 0.027575 29362 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 77.374 18.713 258480000 0 0 0 63645000 0 19566000 0 124270000 0 0 0 51001000 0 0 0 19426 1029 17700 162901;162902;162903;162904 129790;129791 129790 2 GLQDVLR Unmodified 799.4552 0.45520186 1410 P40227;Q92526 CCT6A;CCT6B T-complex protein 1 subunit zeta;T-complex protein 1 subunit zeta-2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.927 52.075 2 0.023392 57479 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.582 12.75 828590000 0 0 0 39943000 31260000 73330000 52136000 48193000 36503000 64315000 109080000 106650000 84117000 65519000 117540000 19427 1410 17701 162905;162906;162907;162908;162909;162910;162911;162912;162913;162914;162915;162916 129792;129793;129794;129795;129796;129797;129798;129799;129800;129801;129802;129803 129795 12 GLQEEPVEGFR Unmodified 1259.6146 0.61461563 1574 P49427 CDC34 Ubiquitin-conjugating enzyme E2 R1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 53.745 54.279 2 0.00020793 60586 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 126.07 80.732 15414000 0 0 0 0 0 0 0 0 0 0 7366400 0 0 0 8047300 19428 1574 17702 162917;162918;162919;162920;162921 129804;129805;129806;129807;129808 129804 4 GLQEFLDR Unmodified 976.49779 0.49779495 533 O75694 NUP155 Nuclear pore complex protein Nup155 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.15 68.23 2 0.0064875 78720 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 100.45 63.43 112810000 0 0 0 4672700 4435500 13254000 6865500 7370900 5388200 11879000 7958800 13245000 8708000 9744700 19288000 19429 533 17703 162922;162923;162924;162925;162926;162927;162928;162929;162930;162931;162932;162933 129809;129810;129811;129812;129813;129814;129815;129816;129817 129816 8 GLQEGYENSR Unmodified 1151.5207 0.52071524 4287 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 2 1 1 1 20.558 20.793 2 0.0011403 21427 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 118.33 73.642 34913000 0 0 0 4350000 0 0 0 0 4272800 0 10979000 0 8632200 6678800 0 19430 4287 17704 162934;162935;162936;162937;162938;162939;162940;162941;162942;162943 129818;129819;129820;129821;129822;129823;129824;129825;129826 129820 9 GLQEQIAETK Unmodified 1115.5823 0.58225287 3780 Q96CN9 GCC1 GRIP and coiled-coil domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 36.999 36.138 2 0.00031982 45734 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.5 72.479 86119000 0 35539000 0 3581100 4022700 6347000 6813700 0 0 6045200 0 5695300 8665400 0 9409800 19431 3780 17705 162944;162945;162946;162947;162948;162949;162950;162951;162952;162953 129827;129828;129829;129830;129831 129828 3 GLQERNPENWAYYK Unmodified 1766.8376 0.8376327 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 2 1 2 2 2 2 1 56.492 56.806 2;3 3.8557E-10 64187 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 99.215 77.169 916580000 0 0 0 0 0 0 4241700 15046000 65907000 143450000 283890000 396140000 0 0 7908500 19432 4226 17706 162954;162955;162956;162957;162958;162959;162960;162961;162962;162963;162964;162965 129832;129833;129834;129835;129836;129837;129838;129839;129840;129841;129842 129836 8 GLQEVGLPLHR Unmodified 1217.6881 0.68805534 936 P11172 UMPS Uridine 5'-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5'-phosphate decarboxylase yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 2 1 2 2 1 2 1 1 2 1 1 1 62.151 62.223 2;3 0.00039053 71454 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 64.82 48.682 242490000 0 0 0 11945000 8162900 32325000 15411000 14591000 12698000 27203000 16695000 28771000 15570000 16840000 42273000 19433 936 17707 162966;162967;162968;162969;162970;162971;162972;162973;162974;162975;162976;162977;162978;162979;162980;162981;162982 129843;129844;129845;129846;129847;129848;129849 129848 3 GLQFIQSTLPLK Unmodified 1343.7813 0.78128702 4888 Q9UGR2 ZC3H7B Zinc finger CCCH domain-containing protein 7B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 85.311 85.451 2 2.4923E-05 99022 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 93.111 64.712 57766000 0 0 0 0 0 4363200 2861200 4486600 3573600 7562700 6533200 5615400 4478800 4470600 13821000 19434 4888 17708 162983;162984;162985;162986;162987;162988;162989;162990;162991;162992 129850;129851;129852;129853;129854;129855;129856;129857;129858;129859;129860 129850 11 GLQFLHTR Unmodified 970.53485 0.53484916 4393 Q9H4A3 WNK1 Serine/threonine-protein kinase WNK1 no no 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 2 1 1 1 1 1 1 48.466 48.636 2 0.016961 55096 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.429 23.955 69992000 0 0 0 0 2560300 12541000 6158600 0 0 5015400 6980200 0 10736000 7976700 18024000 19435 4393 17709 162993;162994;162995;162996;162997;162998;162999;163000;163001 129861;129862 129861 2 GLQGTNRQLEEALK Unmodified 1555.8318 0.83181904 3332 Q8N4P3 HDDC3 Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 59.928 52.49 2;3 0.0083634 71005 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.153 25.181 77884000 61637000 16247000 0 0 0 0 0 0 0 0 0 0 0 0 0 19436 3332 17710 163002;163003;163004 129863;129864;129865 129865 3 GLQLFEAK Unmodified 904.50182 0.5018177 5233 Q9Y5J5 PHLDA3 Pleckstrin homology-like domain family A member 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.236 64.327 2 0.0074646 72575 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.55 48.864 108050000 0 0 0 5712700 6175800 9626700 7759400 7519300 7141600 8817500 10978000 12441000 9499500 9416700 12957000 19437 5233 17711 163005;163006;163007;163008;163009;163010;163011;163012;163013;163014;163015;163016 129866;129867;129868;129869;129870;129871;129872;129873;129874;129875;129876;129877 129869 12 GLQLGQTSTATIQPSQQAQIVTR Unmodified 2425.2925 0.29250021 592 O94842 TOX4 TOX high mobility group box family member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 2 2 1 2 2 2 2 2 2 2 2 73.896 73.981 2;3 6.5445E-81 84818 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 146.99 135.34 432190000 0 0 0 7302300 25889000 29148000 19953000 39118000 23342000 53702000 54333000 50036000 32867000 38387000 58118000 19438 592 17712 163017;163018;163019;163020;163021;163022;163023;163024;163025;163026;163027;163028;163029;163030;163031;163032;163033;163034;163035;163036;163037;163038 129878;129879;129880;129881;129882;129883;129884;129885;129886;129887;129888;129889;129890 129881 13 GLQLLQDGNDPDPYVK Unmodified 1770.8788 0.87882882 178 O00750 PIK3C2B Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit beta yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 76.882 77.034 2 0.0063503 88519 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.435 55.539 19011000 0 0 0 0 0 2372700 1761400 2430800 0 2493300 2072300 0 0 1952100 5928300 19439 178 17713 163039;163040;163041;163042;163043;163044;163045 129891;129892;129893 129893 2 GLQMTGPISTHSLESTAPPVGK Unmodified 2207.1256 0.1256178 459 O75140 DEPDC5 DEP domain-containing protein 5 yes yes 0 0 0 By MS/MS 2 0 1 1 79.733 71.602 3 5.524E-07 94067 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.703 57.153 10994000 10994000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19440 459 17714 163046 129894 129894 1 GLQNPFPQQMQNNSR Unmodified 1757.8268 0.82675044 413 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 2 1 61.241 61.322 2 6.2712E-19 69333 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 108.56 103.07 35682000 0 0 0 3375800 2542200 2809400 2019500 0 0 0 6098100 5906000 0 6255900 6675100 19441 413 17715 163047;163048;163049;163050;163051;163052;163053;163054;163055;163056 129895;129896;129897;129898;129899;129900 129896 5 GLQPGEEELPDISPPIVIPDDSK Unmodified 2444.2323 0.23225095 3699 Q92995 USP13 Ubiquitin carboxyl-terminal hydrolase 13 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 90.342 90.469 3 0.013543 104916 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 14.762 10.811 5961200 0 0 0 0 0 0 0 0 0 2506400 0 0 0 0 3454800 19442 3699 17716 163057;163058 129901;129902 129902 2 GLQQQNSDWYLK Unmodified 1478.7154 0.7153923 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.815 61.915 2 1.1009E-19 70595 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 179.1 167.39 1009200000 0 0 0 87616000 70704000 106480000 72170000 55211000 71447000 87402000 100860000 102330000 61746000 57655000 135580000 19443 1518 17717 163059;163060;163061;163062;163063;163064;163065;163066;163067;163068;163069;163070 129903;129904;129905;129906;129907;129908;129909;129910;129911;129912;129913;129914;129915;129916;129917 129909 15 GLQRALLQQQPEDDSK Unmodified 1824.933 0.93298965 4895 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 yes yes 0 0 1 By MS/MS 2 0 2 2 53.507 45.443 2;3 4.7343E-15 62449 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 114.72 84.283 70368000 70368000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19444 4895 17718 163071;163072 129918;129919;129920 129920 3 GLQSGVDIGVK Unmodified 1071.5924 0.59242362 4008 Q99439 CNN2 Calponin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.76 3 1 23 1 2 1 2 2 2 2 2 1 2 2 2 2 2 2 48.787 48.081 2 2.3545E-05 57965 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 122.13 73.631 2402900000 19499000 1204300000 10950000 66483000 58361000 104090000 74454000 101670000 70516000 113220000 114640000 134590000 102170000 93821000 134140000 19445 4008 17719 163073;163074;163075;163076;163077;163078;163079;163080;163081;163082;163083;163084;163085;163086;163087;163088;163089;163090;163091;163092;163093;163094;163095;163096;163097;163098;163099 129921;129922;129923;129924;129925;129926;129927;129928;129929;129930;129931;129932;129933;129934;129935;129936;129937;129938 129929 17 GLQSYYAVAHAVTER Unmodified 1663.8318 0.83181904 1656 P51532 SMARCA4 Transcription activator BRG1 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 72.54 72.761 3 0.0019563 83795 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 44.294 37.565 14703000 0 0 0 0 0 0 0 0 0 5837800 0 0 0 2681900 6183100 19446 1656 17720 163100;163101;163102 129939;129940 129939 2 GLQTSQDAR Unmodified 974.47812 0.47812214 1225 P27797 CALR Calreticulin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.56 1.69 1 15 1 1 1 1 1 2 1 2 1 2 1 2 8.3255 8.2451 2 1.7924E-05 6908 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 133.6 101.13 872270000 0 2836500 0 58086000 49291000 33853000 59901000 69782000 52570000 49273000 0 82997000 87067000 76996000 249620000 19447 1225 17721 163103;163104;163105;163106;163107;163108;163109;163110;163111;163112;163113;163114;163115;163116;163117;163118 129941;129942;129943;129944;129945;129946;129947;129948;129949;129950 129943 6 GLQTVHINENFAK Unmodified 1469.7627 0.76267685 2320 Q13573 SNW1 SNW domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 1 2 2 2 2 2 2 2 56.525 56.646 2;3 1.3563E-05 63912 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 108.56 95.472 533930000 0 0 0 22135000 29338000 42627000 38923000 24027000 28594000 45107000 55838000 66670000 37430000 55374000 87867000 19448 2320 17722 163119;163120;163121;163122;163123;163124;163125;163126;163127;163128;163129;163130;163131;163132;163133;163134;163135;163136;163137;163138;163139;163140;163141 129951;129952;129953;129954;129955;129956;129957;129958;129959;129960;129961 129959 10 GLQVDLQSDGAAAEDIVASEQSLGQK Unmodified 2628.2879 0.28786834 1332 P33991 MCM4 DNA replication licensing factor MCM4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.23 0.421 10 3 2 9 2 89.294 84.895 2;3 4.6354E-47 106106 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 117.53 110.66 640050000 84178000 524880000 30991000 0 0 0 0 0 0 0 0 0 0 0 0 19449 1332 17723 163142;163143;163144;163145;163146;163147;163148;163149;163150;163151;163152;163153;163154 129962;129963;129964;129965;129966;129967;129968;129969;129970;129971;129972;129973;129974;129975;129976 129976 13 GLQVDTFSR Unmodified 1021.5193 0.51925868 3236 Q8IW75 SERPINA12 Serpin A12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 50.749 50.417 2 0.0055928 57572 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 77.318 36.09 57404000 0 0 0 23945000 6371300 0 0 27088000 0 0 0 0 0 0 0 19450 3236 17724 163155;163156;163157 129977;129978;129979 129978 3 GLQVYIR Unmodified 847.49159 0.49158736 4278 Q9BZZ5 API5 Apoptosis inhibitor 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 54.692 54.709 2 0.019591 61753 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 109.88 37.885 123470000 0 0 0 8945100 12559000 15595000 16033000 0 9858900 18280000 15337000 0 9277600 17579000 0 19451 4278 17725 163158;163159;163160;163161;163162;163163;163164;163165;163166 129980;129981;129982;129983;129984;129985;129986;129987;129988;129989 129981 10 GLRHVTDDQK Unmodified 1167.5996 0.59963426 1408 P40123 CAP2 Adenylyl cyclase-associated protein 2 yes yes 0 0 1 By MS/MS 2 0 2 2 9.9595 6.1848 2;3 1.8028E-15 10180 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 189.18 165.75 355170000 355170000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19452 1408 17726 163167;163168 129990;129991 129990 1 GLRQQGTSVAQSGAQAPGR Unmodified 1867.9613 0.96127009 4208 Q9BWE0 REPIN1 Replication initiator 1 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 26.509 26.837 3 0.002044 28202 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 37.85 32.307 37348000 0 0 0 0 0 0 0 3381800 5722200 5632100 5596500 4872100 8901700 3241700 0 19453 4208 17727 163169;163170;163171;163172;163173;163174;163175 129992;129993;129994;129995 129995 4 GLSASLPDLDSENWIEVK Unmodified 1971.9789 0.97893679 2961 Q6PKG0 LARP1 La-related protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 93.777 90.102 2 1.9521E-53 111705 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145.81 97.247 44210000 0 43386000 823580 0 0 0 0 0 0 0 0 0 0 0 0 19454 2961 17728 163176;163177 129996 129996 1 GLSASYLEPDRYDEEEEGEESISLAAIK Unmodified 3099.4408 0.44079975 3560 Q8WVC0 LEO1 RNA polymerase-associated protein LEO1 yes yes 0 0 1 By MS/MS 2 0 1 1 88.548 80.418 3 2.3357E-66 104613 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 120.27 111.11 17680000 17680000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19455 3560 17729 163178 129997 129997 1 GLSCLVSYQDDPLTK Unmodified 1694.8185 0.81853675 1693 P52630 STAT2 Signal transducer and activator of transcription 2 yes yes 0 0 0 By MS/MS 2 0 1 1 82.859 78.154 2 6.2278E-12 97115 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.24 124.67 41133000 0 41133000 0 0 0 0 0 0 0 0 0 0 0 0 0 19456 1693 17730 163179 129998 129998 1 GLSDALICTDDFIAK Unmodified 1637.7971 0.79707302 2558 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 89.627 85.573 2 4.1747E-23 106453 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 163.59 143.82 51409000 0 51409000 0 0 0 0 0 0 0 0 0 0 0 0 0 19457 2558 17731 163180;163181 129999;130000 130000 2 GLSEAAGQTAQMLER Unmodified 1560.7566 0.75660519 632 O95239 KIF4A Chromosome-associated kinesin KIF4A yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 67.567 67.922 2 0.0012506 77062 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 80.834 57.515 15943000 0 0 0 0 0 0 0 0 0 0 0 0 0 3806100 12137000 19458 632 17732 163182;163183 130001;130002 130002 2 GLSEAAGQTAQMLER Oxidation (M) 1576.7515 0.75151981 632 O95239 KIF4A Chromosome-associated kinesin KIF4A yes yes 0 1 0 By MS/MS 10 0 1 1 54.715 54.191 2 0.021927 61934 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 44.543 26.734 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19459 632 17732 163184 130003 130003 1 GLSEDFQK Unmodified 922.43961 0.43961137 4833 Q9UBB6 NCDN Neurochondrin yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 32.756 33.086 2 0.048531 35657 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 47.443 23.648 47367000 0 0 0 0 0 6217400 5630900 0 0 9532300 0 8270600 5808800 0 11907000 19460 4833 17733 163185;163186;163187;163188;163189;163190 130004 130004 1 GLSEDTTEETLK Unmodified 1321.6249 0.62490554 1085 P19338 NCL Nucleolin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.65 3.66 1 3 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 42.732 41.733 2 8.2749E-23 40782 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 174.41 158.8 2610900000 74641000 1107300000 4361100 72523000 92100000 68016000 94028000 105880000 76491000 84158000 134050000 227770000 162580000 122950000 184060000 19461 1085 17734 163191;163192;163193;163194;163195;163196;163197;163198;163199;163200;163201;163202;163203;163204;163205;163206;163207 130005;130006;130007;130008;130009;130010;130011;130012;130013;130014;130015;130016;130017;130018;130019;130020;130021 130017 15 GLSEDVSISK Unmodified 1033.5292 0.52915466 2481 Q15029 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42.098 41.548 2 0.00099736 46347 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 110.87 75.253 979500000 0 376750000 6482800 27107000 27171000 35961000 0 47069000 36542000 51250000 82611000 71566000 69309000 54607000 93075000 19462 2481 17735 163208;163209;163210;163211;163212;163213;163214;163215;163216;163217;163218;163219;163220;163221 130022;130023;130024;130025;130026;130027;130028;130029;130030;130031;130032;130033;130034;130035;130036;130037;130038;130039;130040 130033 19 GLSFLFPLLK Unmodified 1133.6849 0.68486744 1974 P78344 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 0 0 0 By MS/MS 10 0 1 1 98.096 98.268 2 0.010033 114070 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.721 41.079 1394300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1394300 19463 1974 17736 163222 130041 130041 1 GLSFSEATASNLVK Unmodified 1422.7355 0.73545904 4874 Q9UEY8 ADD3 Gamma-adducin yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 75.269 75.465 2 0.0026755 86175 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 63.408 44.093 40015000 0 0 0 0 0 0 0 5830200 0 6274900 5269400 6755900 0 3046500 12838000 19464 4874 17737 163223;163224;163225;163226;163227;163228 130042;130043 130042 2 GLSGPSGPGHMASR Unmodified 1309.6197 0.61971778 2377 Q14151 SAFB2 Scaffold attachment factor B2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 24.758 24.967 3 0.033165 25323 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 21.814 6.6125 39559000 0 0 0 3775800 2090400 2606400 2433600 3434200 0 4378200 3655100 3798500 4948500 3577100 4861300 19465 2377 17738 163229;163230;163231;163232;163233;163234;163235;163236;163237;163238;163239 130044;130045 130045 2 GLSIQNGVK Unmodified 914.51853 0.5185304 2021 P98082 DAB2 Disabled homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36.401 35.528 2 0.0034116 39044 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 104.45 53.018 549550000 11277000 165420000 1565300 21557000 17915000 20170000 32494000 19027000 21665000 33108000 37589000 29904000 30939000 39706000 67214000 19466 2021 17739 163240;163241;163242;163243;163244;163245;163246;163247;163248;163249;163250;163251;163252;163253;163254 130046;130047;130048;130049;130050;130051;130052;130053;130054;130055;130056;130057;130058 130047 11 GLSLGFLEK Unmodified 962.54368 0.54368251 4641 Q9NU22 MDN1 Midasin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81.796 81.092 2 0.0031541 93514 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 92.439 34.88 77259000 10373000 0 1307200 2483200 2894900 5326100 4939800 5184500 4290700 8369300 5741200 7358900 5792600 5064200 8133300 19467 4641 17740 163255;163256;163257;163258;163259;163260;163261;163262;163263;163264;163265;163266;163267;163268 130059;130060;130061;130062;130063;130064 130061 6 GLSMPGVPK Unmodified 884.47897 0.47897377 2091 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes yes 0 0 0 By MS/MS 2 0 1 1 64.156 58.248 2 0.047063 74653 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.604 37.745 11616000 0 11616000 0 0 0 0 0 0 0 0 0 0 0 0 0 19468 2091 17741 163269 130065 130065 1 GLSNPAEVEALREK Unmodified 1511.7944 0.79437091 1095 P19793 RXRA Retinoic acid receptor RXR-alpha yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 51.259 51.581 3 0.00011276 57082 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.904 52.099 151130000 0 0 0 0 0 10076000 17321000 0 10196000 18775000 18575000 24388000 20272000 0 31522000 19469 1095 17742 163270;163271;163272;163273;163274;163275;163276;163277 130066;130067;130068;130069;130070;130071;130072;130073 130068 7 GLSNPSEVEVLR Unmodified 1298.683 0.68302954 1237 P28702 RXRB Retinoic acid receptor RXR-beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.605 61.704 2 0.001115 69433 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 89.679 69.688 132940000 0 0 0 8869400 8345700 10796000 9426100 11278000 6579200 11017000 14597000 15269000 13679000 8940600 14146000 19470 1237 17743 163278;163279;163280;163281;163282;163283;163284;163285;163286;163287;163288;163289 130074;130075;130076;130077;130078;130079;130080;130081;130082;130083 130080 10 GLSNPSEVEVLREK Unmodified 1555.8206 0.82058566 1237 P28702 RXRB Retinoic acid receptor RXR-beta yes yes 0 0 1 By matching By MS/MS By MS/MS 2.2 0.4 4 1 1 2 2 61.018 55.702 2;3 0.0005977 68987 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 94.551 70.361 130820000 8238000 45032000 77546000 0 0 0 0 0 0 0 0 0 0 0 0 19471 1237 17744 163290;163291;163292;163293;163294 130084;130085;130086;130087 130087 2 GLSPAQADSQFLENAK Unmodified 1674.8213 0.82131394 334 O43491 EPB41L2 Band 4.1-like protein 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 69.049 69.19 2 0.007008 79872 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 47.991 36.779 25650000 0 0 0 0 1204400 2371200 0 1665400 0 4404500 2713000 4003000 2497300 1847400 4943900 19472 334 17745 163295;163296;163297;163298;163299;163300;163301;163302;163303;163304 130088;130089;130090 130090 3 GLSQEGTGPPTSAGEGHSR Unmodified 1823.8398 0.83981755 2838 Q63HN8 RNF213 E3 ubiquitin-protein ligase RNF213 yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS 10 0 5 1 1 1 1 1 23.222 23.423 3 0.0041873 23371 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 33.667 29.424 26012000 0 0 0 0 2346500 3435000 0 0 0 0 0 10023000 6396600 3811300 0 19473 2838 17746 163305;163306;163307;163308;163309 130091;130092 130092 2 GLSQNQQIPQNSVTPR Unmodified 1765.9071 0.90710925 3601 Q8WYP5 AHCTF1 Protein ELYS yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 44.296 44.639 2 2.7966E-23 50144 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 118.48 105.53 7186400 0 0 0 0 0 0 0 0 0 0 0 0 7186400 0 0 19474 3601 17747 163310;163311 130093;130094 130094 2 GLSQSALPYR Unmodified 1090.5771 0.57710791 1887 P62277 RPS13 40S ribosomal protein S13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 49.228 49.386 2 0.0068572 56457 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 119.17 51.193 229020000 0 0 0 12946000 19719000 24672000 19900000 15124000 0 21882000 23859000 26743000 22050000 19390000 22740000 19475 1887 17748 163312;163313;163314;163315;163316;163317;163318;163319;163320;163321;163322 130095;130096;130097;130098 130098 3 GLSQSALPYRR Unmodified 1246.6782 0.67821894 1887 P62277 RPS13 40S ribosomal protein S13 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 39.388 39.567 2;3 1.1209E-12 42830 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 152.34 152.34 1982300000 0 0 0 121260000 144740000 108340000 163350000 137330000 107930000 167160000 192730000 261170000 221150000 142390000 214750000 19476 1887 17749 163323;163324;163325;163326;163327;163328;163329;163330;163331;163332;163333;163334;163335;163336;163337;163338;163339;163340;163341;163342;163343;163344;163345;163346 130099;130100;130101;130102;130103;130104;130105;130106;130107;130108;130109;130110;130111;130112;130113;130114;130115;130116;130117;130118;130119 130106 10 GLSSAGGGSPHREDAQPEHSASAR Unmodified 2360.0854 0.085360983 3698 Q92994 BRF1 Transcription factor IIIB 90 kDa subunit yes yes 0 0 1 By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 13.641 13.795 4 0.00060087 12502 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 33.024 25.221 31205000 0 0 0 0 2328300 2577100 2137200 2239700 1982300 0 0 5382700 5380100 2866800 6311200 19477 3698 17750 163347;163348;163349;163350;163351;163352;163353;163354;163355 130120;130121 130120 2 GLSSDNKPMVNLDK Unmodified 1516.7555 0.75554256 2004 P82979 SARNP SAP domain-containing ribonucleoprotein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 43.536 43.398 3 0.00057106 47579 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 63.128 51.152 293880000 0 0 15266000 13069000 16630000 9292500 18604000 17170000 11388000 19569000 46608000 35429000 19964000 21103000 49790000 19478 2004 17751 163356;163357;163358;163359;163360;163361;163362;163363;163364;163365;163366;163367;163368 130122;130123;130124;130125;130126;130127;130128;130129 130127 4 GLSSDNKPMVNLDK Oxidation (M) 1532.7505 0.75045718 2004 P82979 SARNP SAP domain-containing ribonucleoprotein yes yes 0 1 1 By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By matching 7.7 3.52 2 1 7 2 1 1 1 1 1 1 1 1 36.774 35.573 2;3 0.029223 39194 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 51.276 31.514 80456000 0 34862000 2545800 8268600 3746300 0 5701100 4299500 0 0 6238700 8232800 0 0 6560500 19479 2004 17751 163369;163370;163371;163372;163373;163374;163375;163376;163377;163378 130130;130131;130132 130130 2 GLSSHVEVVEK Unmodified 1182.6245 0.62445203 3999 Q96T58 SPEN Msx2-interacting protein yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 38.407 33.403 3 0.020485 41756 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 34.96 16.288 13208000 8879500 0 4328500 0 0 0 0 0 0 0 0 0 0 0 0 19480 3999 17752 163379;163380 130133 130133 1 GLSSLLCNFTK Unmodified 1238.6329 0.63290823 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 91.971 83.84 2 0.0015534 108715 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.806 52.369 8142800 8142800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19481 1986 17753 163381;163382 130134;130135 130135 2 GLSTESILIPR Unmodified 1184.6765 0.6764876 1292 Q5VSP4;P31025 LCN1P1;LCN1 Putative lipocalin 1-like protein 1;Lipocalin-1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.066 76.128 2 0.00029926 87804 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 107.57 83.42 176200000 0 0 0 13400000 14609000 9981800 12724000 15074000 10397000 14472000 25996000 19498000 11891000 10305000 17855000 19482 1292 17754 163383;163384;163385;163386;163387;163388;163389;163390;163391;163392;163393;163394 130136;130137;130138;130139;130140;130141;130142;130143;130144;130145;130146;130147;130148 130141 13 GLSTFPGAEHCLR Unmodified 1443.6929 0.69288272 3941 Q96P11;Q3KNT7 NSUN5;NSUN5P1 Probable 28S rRNA (cytosine-C(5))-methyltransferase;Putative NOL1/NOP2/Sun domain family member 5B no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 51.987 52.063 3 1.4678E-05 58752 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 78.324 64.607 118030000 0 0 0 0 10614000 0 14752000 15278000 13835000 16542000 0 0 28550000 18459000 0 19483 3941 17755 163395;163396;163397;163398;163399;163400;163401 130149;130150;130151;130152;130153;130154 130153 6 GLSVEFALLADK Unmodified 1261.6918 0.69180331 5253 Q9Y5X2 SNX8 Sorting nexin-8 yes yes 0 0 0 By MS/MS 2 0 1 1 94.29 86.16 2 0.015366 111517 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.63 31.937 4696800 4696800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19484 5253 17756 163402 130155 130155 1 GLSVHTDMASVTK Unmodified 1344.6708 0.6707503 198 O14641 DVL2 Segment polarity protein dishevelled homolog DVL-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 45.551 45.737 3 0.0064207 51585 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 34.685 23.686 70127000 0 0 0 0 2571700 9282400 5912000 4673000 3441900 10149000 5069700 0 5247100 7700600 16079000 19485 198 17757 163403;163404;163405;163406;163407;163408;163409;163410;163411;163412 130156;130157;130158;130159;130160;130161;130162 130156 7 GLSWQPPPYTPTPR Unmodified 1595.8096 0.80962704 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 77.502 77.546 2 0.0020655 89318 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.359 43.159 96652000 0 0 0 4069200 5654700 10719000 5561600 6243400 4320400 13009000 0 13862000 5445600 9896000 17871000 19486 3119 17758 163413;163414;163415;163416;163417;163418;163419;163420;163421;163422;163423 130163;130164;130165;130166;130167 130165 3 GLSYLQLK Unmodified 920.53312 0.53311783 2863 Q69YN4 KIAA1429 Protein virilizer homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 65.816 65.985 2 0.017995 75468 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 64.803 23.883 95054000 0 0 0 0 0 0 0 24146000 0 34937000 0 0 0 35971000 0 19487 2863 17759 163424;163425;163426 130168;130169;130170 130169 3 GLTAQIQSFGR Unmodified 1176.6251 0.62512073 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 64.635 64.688 2 0.0048229 73221 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.759 60.534 61167000 0 0 0 2956300 2758200 4310000 4167100 5009200 4246800 9074300 0 10654000 7185800 0 10806000 19488 2446 17760 163427;163428;163429;163430;163431;163432;163433;163434;163435;163436;163437 130171;130172;130173;130174;130175;130176;130177;130178 130174 8 GLTCSSITILSPK Unmodified 1375.7381 0.73810158 307 O43240 KLK10 Kallikrein-10 yes yes 0 0 0 By MS/MS 10 0 1 1 75.64 75.119 2 0.00045173 87069 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 79.693 51.484 4157500 0 0 0 4157500 0 0 0 0 0 0 0 0 0 0 0 19489 307 17761 163438 130179 130179 1 GLTELQQQFAK Unmodified 1261.6667 0.6666512 610 O94964 SOGA1 Protein SOGA1;N-terminal form;C-terminal 80 kDa form yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 43.984 44.732 3 0.047831 49157 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 24.855 1.9372 18733000 0 0 0 0 0 0 0 0 0 0 0 10986000 0 0 7746200 19490 610 17762 163439;163440 130180 130180 1 GLTEQEVETILDK Unmodified 1473.7563 0.75625407 2330 Q13618 CUL3 Cullin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 82.976 81.714 2 5.901E-21 101669 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 158.41 123.68 635420000 17699000 564350000 5626100 0 3085800 5242300 1976400 0 2957600 7626200 6535100 4342000 1773600 3557800 10651000 19491 2330 17763 163441;163442;163443;163444;163445;163446;163447;163448;163449;163450;163451;163452;163453;163454;163455 130181;130182;130183;130184;130185;130186;130187;130188;130189;130190;130191;130192;130193;130194;130195;130196;130197 130184 17 GLTETGLYR Unmodified 1008.524 0.52400971 4329 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 44.041 44.245 2 0.0037389 49716 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 101.28 76.286 75317000 0 0 0 0 0 23038000 0 0 20160000 15560000 16560000 0 0 0 0 19492 4329 17764 163456;163457;163458;163459;163460 130198;130199;130200;130201;130202 130200 5 GLTGQAEAREHAK Unmodified 1366.6953 0.69532556 2821 Q5VVQ6 YOD1 Ubiquitin thioesterase OTU1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 15.078 11.869 3 0.004019 17458 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.576 39.949 136860000 133410000 0 3445900 0 0 0 0 0 0 0 0 0 0 0 0 19493 2821 17765 163461;163462 130203;130204 130204 2 GLTLIELWEGLTVDDVQK Unmodified 2028.0779 0.077922555 1774 P55809 OXCT1 Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 103.04 94.912 3 4.0325E-09 122045 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.376 68.14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19494 1774 17766 163463 130205 130205 1 GLTLNCLGK Unmodified 974.5219 0.52190122 4226;2895 Q6N069;Q9BXJ9 NAA16;NAA15 N-alpha-acetyltransferase 16, NatA auxiliary subunit;N-alpha-acetyltransferase 15, NatA auxiliary subunit no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 57.836 56.421 2 0.0030241 63888 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 91.626 63.52 2284600000 65076000 74609000 0 9534700 0 0 0 115070000 126790000 375380000 529520000 980170000 0 0 8414100 19495 2895;4226 17767 163464;163465;163466;163467;163468;163469;163470;163471;163472 130206;130207;130208;130209;130210;130211;130212;130213;130214;130215 130209 10 GLTPSQIGVILR Unmodified 1252.7503 0.75032125 1887 P62277 RPS13 40S ribosomal protein S13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.527 82.588 2 3.1467E-08 95639 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 129.1 90.323 1046600000 0 0 0 16986000 43321000 73108000 43645000 65992000 55405000 111940000 87683000 132520000 99643000 98543000 217860000 19496 1887 17768 163473;163474;163475;163476;163477;163478;163479;163480;163481;163482;163483;163484 130216;130217;130218;130219;130220;130221;130222;130223;130224;130225 130222 10 GLTPTGMLPSGVLSGGK Oxidation (M) 1586.8338 0.83379288 2151 Q08209 PPP3CA Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.91 3.42 2 1 8 1 2 1 1 1 1 1 1 1 1 76.356 74.874 2 6.7277E-05 86866 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 73.624 52.846 91177000 8378500 37854000 0 4258600 3198600 5959900 6449500 0 3411600 5798900 7001300 8866000 0 0 0 19497 2151 17769 163485;163486;163487;163488;163489;163490;163491;163492;163493;163494;163495 130226;130227;130228;130229;130230;130231;130232;130233;130234;130235;130236 130226 3459 10 GLTPTGMLPSGVLSGGK Unmodified 1570.8389 0.83887826 2151 Q08209 PPP3CA Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform yes yes 0 0 0 By MS/MS 2 0 1 1 87.923 79.793 2 0.014864 103843 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 59.225 44.535 16766000 16766000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19498 2151 17769 163496 130237 130237 1 GLTSVINQK Unmodified 958.54475 0.54474515 836 P07195 LDHB L-lactate dehydrogenase B chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.18 3.29 3 1 13 1 2 1 1 1 1 1 1 1 1 1 1 1 2 1 43.652 42.492 2 2.5385E-05 46036 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 143 89.838 2766000000 87974000 89785000 7253500 24593000 29436000 38726000 42322000 33707000 20640000 54987000 495660000 366950000 44663000 310240000 1119100000 19499 836 17770 163497;163498;163499;163500;163501;163502;163503;163504;163505;163506;163507;163508;163509;163510;163511;163512;163513 130238;130239;130240;130241;130242;130243;130244;130245;130246;130247;130248;130249;130250;130251;130252;130253 130249 13 GLTTTGNSSLNSTSNTK Unmodified 1681.8119 0.81187146 3913 Q96KR1 ZFR Zinc finger RNA-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 28.11 27.651 2 3.247E-46 28916 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 191.26 171.49 241020000 0 31497000 0 11491000 9271100 15272000 13964000 11477000 8706500 19362000 23905000 25804000 21216000 21234000 27816000 19500 3913 17771 163514;163515;163516;163517;163518;163519;163520;163521;163522;163523;163524;163525;163526;163527 130254;130255;130256;130257;130258;130259;130260;130261;130262;130263;130264;130265;130266;130267 130259 14 GLTVDSILQTDDATLGK Unmodified 1745.9047 0.90470922 1988 P78549 NTHL1 Endonuclease III-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 84.227 84.335 2 2.5807E-31 97669 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 154.36 125.06 59055000 0 0 0 0 5399900 5542700 3887500 4395900 5614300 8490900 5734000 6639800 0 4045400 9304700 19501 1988 17772 163528;163529;163530;163531;163532;163533;163534;163535;163536;163537;163538 130268;130269;130270;130271;130272;130273;130274;130275;130276;130277;130278 130269 11 GLTVPIASIDIPSGWDVEK Unmodified 1996.0517 0.051707805 3412 Q8NCW5 APOA1BP NAD(P)H-hydrate epimerase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 4.25 3.34 2 1 1 1 1 1 1 96.486 93.051 2 7.6972E-31 115706 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 122.97 98.894 99399000 55188000 28329000 12583000 0 0 0 0 0 0 0 0 0 0 0 3299300 19502 3412 17773 163539;163540;163541;163542 130279;130280;130281;130282;130283 130282 5 GLVAEGHR Unmodified 837.4457 0.4456998 1073 P18206 VCL Vinculin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 9.6035 9.6905 2 0.026049 7177 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.194 25.723 30277000 0 0 0 3725200 0 3078900 0 0 0 3863600 0 0 0 0 19609000 19503 1073 17774 163543;163544;163545;163546 130284 130284 1 GLVASLISVK Unmodified 985.61718 0.61718181 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 1 1 1 1 1 1 1 1 1 1 1 1 1 80.077 79.289 2 0.0017421 90586 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 88.948 58.763 159950000 18975000 4107600 0 0 4410800 13908000 7400100 9869400 11812000 15761000 14363000 13013000 8804100 9453200 28078000 19504 643 17775 163547;163548;163549;163550;163551;163552;163553;163554;163555;163556;163557;163558;163559 130285;130286;130287;130288;130289;130290;130291;130292;130293;130294;130295;130296;130297 130294 13 GLVEDTLR Unmodified 901.4869 0.48689592 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 46.258 46.53 2 0.025168 52195 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 58.917 27.628 107990000 0 0 0 12467000 0 0 0 8914000 9231700 13981000 14091000 22677000 11972000 0 14655000 19505 2501 17776 163560;163561;163562;163563;163564;163565;163566;163567 130298;130299 130299 2 GLVEPVDVVDNADGTQTVNYVPSR Unmodified 2543.2504 0.25036063 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.72 1.37 1 24 1 2 2 2 2 2 2 2 2 2 2 2 2 81.329 81.256 2;3 5.9052E-82 93722 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 146.6 139.15 1029700000 0 3362600 0 13638000 57536000 80719000 42084000 52218000 51690000 133050000 126620000 129520000 36820000 64922000 237520000 19506 1124 17777 163568;163569;163570;163571;163572;163573;163574;163575;163576;163577;163578;163579;163580;163581;163582;163583;163584;163585;163586;163587;163588;163589;163590;163591;163592 130300;130301;130302;130303;130304;130305;130306;130307;130308;130309;130310;130311;130312;130313;130314 130303 15 GLVGEIIK Unmodified 827.51165 0.5116541 1138;1022 P22392;P15531 NME2;NME1 Nucleoside diphosphate kinase B;Nucleoside diphosphate kinase A no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 2 1 2 2 64.054 64.142 1;2 0.0067729 73212 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 97.602 9.5731 24776000000 0 0 0 789100000 1684900000 2132100000 3001700000 4053400000 3237200000 2355700000 3114700000 3702300000 4623200 171450000 528440000 19507 1138;1022 17778 163593;163594;163595;163596;163597;163598;163599;163600;163601;163602;163603;163604;163605;163606;163607;163608;163609;163610;163611;163612;163613;163614;163615 130315;130316;130317;130318;130319;130320;130321;130322;130323;130324;130325;130326;130327;130328;130329;130330;130331;130332;130333;130334;130335;130336;130337;130338;130339;130340;130341;130342 130324 26 GLVGEIIKR Unmodified 983.61277 0.61276513 1138;1022 P22392;P15531 NME2;NME1 Nucleoside diphosphate kinase B;Nucleoside diphosphate kinase A no no 0 0 1 By MS/MS By MS/MS By matching By MS/MS By matching 10 0 5 1 1 1 1 1 52.383 52.785 2 0.042627 59067 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 80.229 34.835 115410000 0 0 0 0 0 5377700 0 0 0 11088000 8346200 84623000 0 0 5979200 19508 1138;1022 17779 163616;163617;163618;163619;163620 130343 130343 1 GLVGIEFK Unmodified 861.496 0.49600404 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 70.947 70.974 2 0.014742 82114 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 69.998 19.459 149130000 0 0 0 25753000 7936800 7317800 10986000 33624000 5520800 11060000 10720000 24632000 11578000 0 0 19509 1029 17780 163621;163622;163623;163624;163625;163626;163627;163628;163629;163630 130344;130345;130346 130346 3 GLVGPELHDR Unmodified 1091.5724 0.57235688 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 36.665 36.805 2 0.014232 41395 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 50.805 20.619 26387000 0 0 0 2914100 2597700 0 3109800 0 0 0 4289300 6773500 3934200 2767900 0 19510 2501 17781 163631;163632;163633;163634;163635;163636;163637 130347 130347 1 GLVLDHGAR Unmodified 936.51411 0.51411372 1410 P40227 CCT6A T-complex protein 1 subunit zeta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.898 25.101 2 0.0030241 26971 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 91.626 62.288 367430000 0 0 0 26874000 19982000 37290000 25318000 21963000 13922000 34674000 34295000 31945000 32717000 30389000 58058000 19511 1410 17782 163638;163639;163640;163641;163642;163643;163644;163645;163646;163647;163648;163649 130348;130349;130350;130351;130352;130353;130354;130355;130356;130357;130358;130359;130360 130348 12 GLVLDHGARHPDMK Oxidation (M) 1560.7831 0.78309471 1410 P40227 CCT6A T-complex protein 1 subunit zeta yes yes 0 1 1 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 20.965 21.241 3 0.00036483 20885 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 61.423 32.633 126250000 0 0 0 10352000 0 24902000 0 11391000 15712000 8758500 9572200 12507000 4820000 17828000 10405000 19512 1410 17783 163650;163651;163652;163653;163654;163655;163656;163657;163658;163659 130361;130362 130362 2211 2 GLVLDHGARHPDMK Unmodified 1544.7882 0.78818009 1410 P40227 CCT6A T-complex protein 1 subunit zeta yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 2 1 2 2 1 1 1 2 1 30.984 31.125 3;4 0.0023342 31623 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.972 42.99 250260000 0 0 0 6097000 1855500 67477000 10227000 29877000 37445000 7962800 8944400 0 6645000 33428000 40303000 19513 1410 17783 163660;163661;163662;163663;163664;163665;163666;163667;163668;163669;163670;163671;163672;163673;163674 130363;130364;130365;130366;130367;130368;130369;130370 130363 4 GLVLGIYSK Unmodified 948.56442 0.56441796 1240 P28838 LAP3 Cytosol aminopeptidase yes yes 0 0 0 By MS/MS By MS/MS 3 0 2 1 1 75.743 71.979 2 0.040392 86257 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 60.59 37.661 9179900 230410 8949500 0 0 0 0 0 0 0 0 0 0 0 0 0 19514 1240 17784 163675;163676 130371 130371 1 GLVLGPIHK Unmodified 932.58074 0.58073672 860 P08195 SLC3A2 4F2 cell-surface antigen heavy chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.271 51.422 2 0.0068541 57288 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 73.975 42.671 590270000 0 0 0 27864000 31216000 46449000 28804000 51561000 28160000 46112000 59128000 71395000 72713000 49322000 77544000 19515 860 17785 163677;163678;163679;163680;163681;163682;163683;163684;163685;163686;163687;163688 130372;130373;130374;130375;130376;130377;130378;130379;130380;130381;130382;130383;130384;130385;130386 130380 15 GLVLMSR Oxidation (M) 790.43711 0.43710895 1227 P27824 CANX Calnexin yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 32.789 32.955 2 0.035302 35785 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 58.167 24.314 118530000 0 0 0 17734000 0 0 0 0 15851000 20214000 22160000 0 25014000 17557000 0 19516 1227 17786 163689;163690;163691;163692;163693;163694 130387;130388 130387 2 GLVLPVGGGSAPGPLQSK Unmodified 1632.9199 0.91990577 3030 Q71SY5 MED25 Mediator of RNA polymerase II transcription subunit 25 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.02 80.079 2 9.7408E-15 92274 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 117.07 104.46 117200000 0 0 0 6296400 5473600 9237500 8791000 8350100 6881400 10737000 8094200 14279000 10688000 10069000 18300000 19517 3030 17787 163695;163696;163697;163698;163699;163700;163701;163702;163703;163704;163705;163706 130389;130390;130391;130392;130393;130394;130395;130396;130397;130398 130391 9 GLVLRNEK Unmodified 927.55016 0.55016488 861;1063 P17858;P08237 PFKL;PFKM ATP-dependent 6-phosphofructokinase, liver type;ATP-dependent 6-phosphofructokinase, muscle type no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 19.105 19.385 2 0.038979 18332 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 120.92 26.758 158750000 0 0 0 0 0 12454000 0 14476000 13092000 20994000 0 30593000 20831000 19194000 27118000 19518 1063;861 17788 163707;163708;163709;163710;163711;163712;163713;163714 130399;130400 130400 0 GLVLSGVLHK Unmodified 1021.6284 0.6284152 1251 P29508 SERPINB3 Serpin B3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 63.148 63.252 2 0.00064831 73526 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 122.18 77.781 235440000 0 0 0 143720000 9948800 0 0 12737000 5463600 11563000 10233000 15910000 7476700 7364100 11026000 19519 1251 17789 163715;163716;163717;163718;163719;163720;163721;163722;163723;163724 130401;130402;130403;130404;130405;130406;130407;130408;130409;130410;130411;130412;130413;130414 130411 14 GLVNDLAR Unmodified 856.47667 0.47666558 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.926 47.092 2 0.015415 52800 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 68.915 36.444 188410000 0 0 0 10877000 7854400 24646000 12545000 11820000 8036800 20764000 16319000 14627000 18602000 17272000 25049000 19520 3119 17790 163725;163726;163727;163728;163729;163730;163731;163732;163733;163734;163735;163736 130415;130416;130417;130418 130415 3 GLVNLQSGAPKPEENPSLNIQFK Unmodified 2479.3071 0.30708764 5117 Q9Y2T2 AP3M1 AP-3 complex subunit mu-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 81.244 79.758 3 6.7267E-11 101429 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.221 74.339 47700000 11398000 0 0 0 0 0 0 0 3693800 10847000 4861800 0 0 0 16900000 19521 5117 17791 163737;163738;163739;163740;163741 130419;130420;130421;130422 130421 4 GLVNLYNLPGDNK Unmodified 1415.7409 0.74087877 2558 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS 8.64 2.9 1 1 9 1 1 1 1 1 1 1 1 1 1 1 78.913 77.957 2 0.0020971 98580 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.47 83.517 111900000 16342000 4870300 0 0 6725500 0 7418300 11522000 9075000 13136000 10157000 11746000 10160000 10751000 0 19522 2558 17792 163742;163743;163744;163745;163746;163747;163748;163749;163750;163751;163752 130423;130424;130425;130426;130427 130425 2 GLVNVAAK Unmodified 770.46504 0.46503826 328 O43427 FIBP Acidic fibroblast growth factor intracellular-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 32.536 32.752 2 0.027461 35584 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 57.335 18.964 35029000 0 0 0 0 3417300 0 4854100 0 2147700 3863800 5509900 0 4712700 4904100 5619300 19523 328 17793 163753;163754;163755;163756;163757;163758;163759;163760 130428 130428 1 GLVPEDDTK Unmodified 972.47639 0.47639081 2539 Q15459 SF3A1 Splicing factor 3A subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30.8 30.267 2 0.0073052 38334 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.302 68.852 1488100000 550180 773390000 0 38295000 41045000 53804000 41556000 46804000 33717000 56362000 67912000 91143000 58000000 80580000 104900000 19524 2539 17794 163761;163762;163763;163764;163765;163766;163767;163768;163769;163770;163771;163772;163773;163774 130429;130430;130431;130432;130433;130434;130435;130436;130437;130438;130439;130440 130433 10 GLVPPNASR Unmodified 909.50321 0.50321468 1530 P47929 LGALS7 Galectin-7 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 31.996 32.3 2 0.0051781 36490 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 81.191 25.75 85928000 0 0 0 49710000 0 0 0 25974000 0 0 0 5054100 0 0 5189900 19525 1530 17795 163775;163776;163777;163778 130441;130442;130443;130444;130445 130444 5 GLVPTDYVEILPSDGK Unmodified 1701.8825 0.88251721 5252 Q9Y5X1 SNX9 Sorting nexin-9 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching 8 3.46 1 3 1 1 1 1 87.596 86.378 2 0.0012156 106885 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.498 50.244 24044000 0 14753000 0 0 2222900 4723400 0 0 2345300 0 0 0 0 0 0 19526 5252 17796 163779;163780;163781;163782 130446;130447 130447 2 GLVQALQTK Unmodified 956.56548 0.56548059 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 51.124 49.818 2 3.2492E-05 55979 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 151.27 68.816 4505700000 1424100000 693460000 181990000 88817000 82556000 289950000 132060000 108970000 82769000 198370000 211740000 285300000 154550000 184680000 386480000 19527 1565 17797 163783;163784;163785;163786;163787;163788;163789;163790;163791;163792;163793;163794;163795;163796;163797;163798 130448;130449;130450;130451;130452;130453;130454;130455;130456;130457;130458;130459;130460;130461;130462;130463;130464;130465;130466;130467;130468;130469;130470;130471;130472;130473;130474;130475;130476;130477;130478;130479;130480;130481;130482;130483 130457 36 GLVSSDELAK Unmodified 1017.5342 0.53424004 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.346 41.524 2 0.0029455 45100 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 78.516 53.622 141000000 0 0 0 8930400 4250000 9955800 9164100 7508600 5668800 11448000 17226000 18548000 10733000 12233000 25335000 19528 2344 17798 163799;163800;163801;163802;163803;163804;163805;163806;163807;163808;163809;163810 130484;130485;130486;130487;130488;130489;130490;130491 130488 8 GLVVDMDGFEEERK Oxidation (M) 1638.7559 0.75593649 1578 P49588 AARS Alanine--tRNA ligase, cytoplasmic yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.43 3.54 8 2 4 4 3 3 1 1 1 1 56.561 52.448 2;3 4.943E-24 66065 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 127.02 121.86 515990000 157280000 143750000 145130000 5517900 0 13586000 0 0 0 0 20269000 30459000 0 0 0 19529 1578 17799 163811;163812;163813;163814;163815;163816;163817;163818;163819;163820;163821;163822;163823;163824 130492;130493;130494;130495;130496;130497;130498;130499;130500;130501;130502;130503;130504;130505;130506;130507;130508;130509 130503 2533 17 GLVVDMDGFEEERK Unmodified 1622.761 0.76102187 1578 P49588 AARS Alanine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 6.33 3.93 6 1 8 2 2 3 1 1 1 1 2 2 73.907 71.812 2;3 2.6071E-15 93063 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 119.01 106.39 963900000 710590000 117040000 65455000 0 0 4357800 0 0 0 4262900 5284100 7268600 0 7339800 42294000 19530 1578 17799 163825;163826;163827;163828;163829;163830;163831;163832;163833;163834;163835;163836;163837;163838;163839 130510;130511;130512;130513;130514;130515;130516;130517;130518;130519;130520;130521;130522;130523 130517 12 GLVVPSGGGR Unmodified 897.50321 0.50321468 4978 Q9UKX7 NUP50 Nuclear pore complex protein Nup50 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.213 35.394 2 0.0055794 38408 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 68.383 45.234 220780000 0 0 0 11059000 10320000 16776000 17325000 15473000 12376000 17881000 24162000 22677000 23709000 17346000 31675000 19531 4978 17800 163840;163841;163842;163843;163844;163845;163846;163847;163848;163849;163850;163851 130524;130525;130526;130527;130528;130529;130530;130531 130528 7 GLVYSSNFQNVK Unmodified 1354.6881 0.68811492 3941 Q96P11 NSUN5 Probable 28S rRNA (cytosine-C(5))-methyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 59.743 58.57 2 4.2707E-05 67164 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 108.98 93.096 278490000 28168000 18129000 0 10978000 21162000 18446000 12403000 22005000 13511000 22014000 26495000 28145000 17282000 13115000 26636000 19532 3941 17801 163852;163853;163854;163855;163856;163857;163858;163859;163860;163861;163862;163863;163864;163865;163866 130532;130533;130534;130535;130536;130537;130538;130539;130540;130541;130542;130543;130544;130545;130546 130546 15 GLWHEEMK Oxidation (M) 1044.4699 0.46986564 1171 P23921 RRM1 Ribonucleoside-diphosphate reductase large subunit yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24.194 23.737 2 0.0060423 24573 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 83.753 72.683 117490000 16145000 0 1881500 6602000 3792100 7497200 7818500 4601700 4949200 8323200 7501300 13612000 9985200 8755700 16030000 19533 1171 17802 163867;163868;163869;163870;163871;163872;163873;163874;163875;163876;163877;163878;163879;163880 130547;130548;130549;130550;130551;130552;130553;130554 130548 1690 8 GLYDGPVCEVSVTPK Unmodified 1619.7865 0.78650834 2613 Q16555 DPYSL2 Dihydropyrimidinase-related protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.7 70.755 2 9.4779E-06 81467 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 80.979 66.821 97374000 0 0 0 3118700 2293500 4001500 0 4738800 0 5658900 13531000 14417000 4475600 11525000 33613000 19534 2613 17803 163881;163882;163883;163884;163885;163886;163887;163888;163889;163890;163891;163892 130555;130556;130557;130558;130559;130560;130561;130562;130563;130564;130565;130566;130567 130556 13 GLYMANDLK Oxidation (M) 1039.5008 0.50083142 5112 Q9Y2Q3 GSTK1 Glutathione S-transferase kappa 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 39.235 39.361 2 0.018049 43607 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 49.423 34.759 74267000 0 0 0 5474500 5019900 9991900 8007000 0 6979700 8056000 7598600 11479000 6631300 5028400 0 19535 5112 17804 163893;163894;163895;163896;163897;163898;163899;163900;163901;163902 130568;130569;130570;130571;130572;130573;130574 130573 6504 7 GLYMANDLK Unmodified 1023.5059 0.5059168 5112 Q9Y2Q3 GSTK1 Glutathione S-transferase kappa 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 53.02 53.195 2 0.040952 60096 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 62.107 41.548 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19536 5112 17804 163903;163904;163905 130575;130576;130577 130575 3 GLYVTDQEK Unmodified 1051.5186 0.51858998 2164 Q08AD1 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 31.438 30.694 2 0.0069711 32134 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 73.665 44.288 135320000 0 72239000 0 7135900 4719500 6897400 7059700 0 5138100 7447100 8298800 0 0 6266200 10115000 19537 2164 17805 163906;163907;163908;163909;163910;163911;163912;163913;163914;163915;163916;163917;163918 130578;130579;130580;130581;130582;130583;130584;130585;130586;130587 130585 10 GMAAAGNYAWVNR Oxidation (M) 1395.6354 0.63536784 5168 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog yes yes 0 1 0 By MS/MS 10 0 1 1 49.71 49.179 2 0.025949 55993 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 46.462 34.614 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19538 5168 17806 163919 130588 130588 1 GMADIDIQDDK Unmodified 1219.5391 0.53906742 2776 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 yes yes 0 0 0 By MS/MS 2 0 1 1 53.933 48.141 2 0.0014754 62377 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.496 75.442 15252000 0 15252000 0 0 0 0 0 0 0 0 0 0 0 0 0 19539 2776 17807 163920 130589 130589 1 GMADIDIQDDK Oxidation (M) 1235.534 0.53398204 2776 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 yes yes 0 1 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 34.721 34.719 2 0.0050144 38107 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 53.597 42.767 7357900 0 0 0 0 1639400 0 0 0 2310300 0 0 0 0 3408200 0 19540 2776 17807 163921;163922;163923 130590;130591 130590 4415 2 GMAFTLQER Oxidation (M) 1067.507 0.50697943 1154 P23368 ME2 NAD-dependent malic enzyme, mitochondrial yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 43.856 43.751 2 0.0072709 48664 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 63.419 49.771 71438000 0 0 0 9488500 8924600 8462600 15272000 0 14453000 14837000 0 0 0 0 0 19541 1154 17808 163924;163925;163926;163927;163928;163929 130592;130593 130592 1665 2 GMAFTLQER Unmodified 1051.5121 0.51206481 1154 P23368 ME2 NAD-dependent malic enzyme, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 59.58 59.616 2 0.009185 67318 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 67.464 48.688 73272000 0 0 0 3596200 5570900 5502200 6103900 9040500 7821900 8798900 11924000 14914000 0 0 0 19542 1154 17808 163930;163931;163932;163933;163934;163935;163936;163937;163938 130594;130595;130596 130595 2 GMDADPYNPVLPTNR Oxidation (M) 1674.7672 0.76716988 4425 Q9H6T3 RPAP3 RNA polymerase II-associated protein 3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.497 60.601 2 5.5972E-10 69121 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 94.191 87.951 55197000 0 0 0 3552400 2864000 3335200 4763200 4414300 4493300 5322200 5523900 6313100 4205500 2948000 7461600 19543 4425 17809 163939;163940;163941;163942;163943;163944;163945;163946;163947;163948;163949;163950 130597;130598;130599;130600;130601;130602;130603;130604;130605;130606 130600 5875 10 GMDGSTNETASSR Unmodified 1311.5361 0.53610731 5154 Q9Y3B9 RRP15 RRP15-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 8.5867 8.7149 2 0.0018862 7273 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 74.944 74.944 14508000 0 0 0 977030 1141900 463990 567910 571360 431050 1070200 2942000 1806300 1439200 1312700 1784000 19544 5154 17810 163951;163952;163953;163954;163955;163956;163957;163958;163959;163960;163961;163962 130607;130608;130609;130610 130610 4 GMDGSTNETASSRK Unmodified 1439.6311 0.63107033 5154 Q9Y3B9 RRP15 RRP15-like protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 6.487 6.6077 3 0.00018895 3967 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.215 58.111 52899000 0 0 0 2827200 3423500 3101900 2987500 0 3534500 4184500 9297800 6183900 5283900 4661500 7413300 19545 5154 17811 163963;163964;163965;163966;163967;163968;163969;163970;163971;163972;163973 130611;130612;130613;130614;130615;130616;130617;130618;130619;130620 130614 10 GMDVYGYLLAR Oxidation (M) 1272.6173 0.61725816 4944 Q9UJX3 ANAPC7 Anaphase-promoting complex subunit 7 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 77.696 77.71 2 0.0086272 89590 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 46.891 38.028 43985000 0 0 0 3101100 4166100 5011600 4879300 3464100 0 0 9167300 0 6282400 0 7913300 19546 4944 17812 163974;163975;163976;163977;163978;163979;163980;163981 130621;130622;130623;130624 130622 6288 3 GMEELIPLVNK Oxidation (M) 1257.6639 0.663874 1630 P50570 DNM2 Dynamin-2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.015 74.076 2 0.00019023 85213 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 93.467 85.127 308350000 0 0 0 18244000 16376000 29437000 22911000 20737000 16691000 31441000 26296000 30052000 23309000 25699000 47160000 19547 1630 17813 163982;163983;163984;163985;163986;163987;163988;163989;163990;163991;163992;163993 130625;130626;130627;130628;130629;130630;130631;130632;130633;130634;130635;130636 130634 2619 12 GMEELIPLVNK Unmodified 1241.669 0.66895938 1630 P50570 DNM2 Dynamin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 83.518 83.581 2 0.0028537 96858 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 101.64 88.607 261140000 0 0 0 5650600 5545600 17256000 13106000 21190000 13467000 26200000 22521000 24486000 17205000 30389000 64125000 19548 1630 17813 163994;163995;163996;163997;163998;163999;164000;164001;164002;164003;164004;164005 130637;130638;130639;130640;130641;130642;130643 130637 1 GMELSVLDSLNAR Oxidation (M) 1419.7028 0.70277871 193 O14617 AP3D1 AP-3 complex subunit delta-1 yes yes 0 1 0 By MS/MS 10 0 1 1 78.17 78.286 2 0.036928 89488 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 45.433 27.997 6133600 0 0 0 0 0 0 0 0 0 0 0 0 0 6133600 0 19549 193 17814 164006 130644 130644 0 GMFEPYLK Unmodified 983.47864 0.47863942 128 O00203;Q13367 AP3B1;AP3B2 AP-3 complex subunit beta-1;AP-3 complex subunit beta-2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 69.992 70.035 2 0.042322 79545 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.65 34.151 67622000 0 0 0 3800900 3513900 6994700 4924200 8354800 5330900 0 8296000 0 4587300 7684200 14136000 19550 128 17815 164007;164008;164009;164010;164011;164012;164013;164014;164015;164016 130645;130646;130647 130646 3 GMFEPYLK Oxidation (M) 999.47355 0.47355404 128 O00203;Q13367 AP3B1;AP3B2 AP-3 complex subunit beta-1;AP-3 complex subunit beta-2 yes no 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 53.471 53.725 2 0.019529 60558 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 56.011 46.024 55468000 0 0 0 0 0 0 12341000 8724600 5480900 0 0 10438000 10291000 8192800 0 19551 128 17815 164017;164018;164019;164020;164021;164022 130648;130649;130650;130651 130651 167 4 GMFLAQINK Oxidation (M) 1036.5376 0.53755128 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 52.158 52.101 2 0.015697 58612 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 50.898 35.399 15468000 0 0 0 0 2904600 5556300 2793200 0 4214300 0 0 0 0 0 0 19552 5189 17816 164023;164024;164025;164026;164027 130652;130653;130654;130655;130656 130654 6581 5 GMFYNSYPQQDGK Oxidation (M) 1549.6507 0.65074314 1533 P48147 PREP Prolyl endopeptidase yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 44.056 39.043 2 2.7607E-120 50905 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 236.32 227.12 46357000 0 46357000 0 0 0 0 0 0 0 0 0 0 0 0 0 19553 1533 17817 164028;164029 130657;130658;130659 130658 2433 3 GMFYNSYPQQDGK Unmodified 1533.6558 0.65582851 1533 P48147 PREP Prolyl endopeptidase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 56.453 51.993 2 0.00083437 58493 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83 76.311 86713000 21225000 57666000 0 0 0 0 0 0 0 0 0 0 0 0 7822200 19554 1533 17817 164030;164031;164032 130660;130661;130662;130663 130662 4 GMGEAVQEFVDK Oxidation (M) 1324.5969 0.59691665 1614 P49959 MRE11A Double-strand break repair protein MRE11A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 50.754 50.869 2 1.6389E-05 57490 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 93.058 88.642 29818000 0 0 0 0 0 17282000 0 0 12536000 0 0 0 0 0 0 19555 1614 17818 164033;164034;164035;164036;164037;164038;164039;164040;164041 130664;130665;130666;130667;130668;130669;130670;130671;130672 130664 2594 9 GMGEAVQEFVDK Unmodified 1308.602 0.60200203 1614 P49959 MRE11A Double-strand break repair protein MRE11A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.69 70.762 2 0.0022534 81389 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 63.624 55.092 88118000 0 0 0 3066400 2405700 9028900 3070800 6714600 4572400 10223000 7908900 9295200 4720700 5116200 21996000 19556 1614 17818 164042;164043;164044;164045;164046;164047;164048;164049;164050;164051;164052;164053 130673;130674;130675;130676;130677;130678;130679;130680;130681;130682 130674 9 GMGEAVQEFVDKEEK Oxidation (M) 1710.7771 0.77706586 1614 P49959 MRE11A Double-strand break repair protein MRE11A yes yes 0 1 1 By MS/MS 10 0 2 2 53.581 53.845 3 0.0055244 61211 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 47.506 41.301 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19557 1614 17819 164054;164055 130683;130684 130684 2594 2 GMGFLMR Oxidation (M) 826.38296 0.38296489 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 51.384 51.564 2 0.041221 58365 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 53.522 36.817 28430000 0 0 0 0 0 10132000 4404800 6288600 0 0 7604500 0 0 0 0 19558 3641 17820 164056;164057;164058;164059 130685 130685 1 GMGFLMR Unmodified 810.38805 0.38805027 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 64.913 64.996 2 0.049222 73559 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 64.276 53.97 38512000 0 0 0 1140800 1381900 3365700 1966100 3426400 0 3011100 3857400 5701800 3131700 3860100 7668700 19559 3641 17820 164060;164061;164062;164063;164064;164065;164066;164067;164068;164069;164070 130686 130686 1 GMGGAMDLVSSAK Unmodified 1222.5686 0.56859341 1774 P55809 OXCT1 Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 67.518 61.602 2 0.0026707 79176 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.843 68.746 127260000 0 127260000 0 0 0 0 0 0 0 0 0 0 0 0 0 19560 1774 17821 164071 130687;130688 130688 2 GMGGAMDLVSSAK 2 Oxidation (M) 1254.5584 0.55842266 1774 P55809 OXCT1 Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial yes yes 0 2 0 By MS/MS 3 0 1 1 34.241 29.728 2 0.025909 37261 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 44.543 40.092 4571000 0 4571000 0 0 0 0 0 0 0 0 0 0 0 0 0 19561 1774 17821 164072 130689 130689 0 GMGLGFTSSMR Unmodified 1142.5212 0.52124929 3049 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 66.836 67.097 2 0.014976 76050 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.022 28.058 30170000 0 0 0 0 0 0 1924900 3370500 2703600 2862600 4102800 4585800 0 2924300 7695900 19562 3049 17822 164073;164074;164075;164076;164077;164078;164079;164080 130690;130691;130692;130693 130691 4 GMGLSLMR Oxidation (M) 879.43064 0.43064337 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 2 1 2 2 2 1 2 2 1 2 2 48.321 48.509 2 0.016831 54087 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.604 43.165 270120000 0 0 0 16342000 8242200 37311000 17108000 14512000 0 17730000 34301000 28949000 7992700 22250000 65386000 19563 1565 17823 164081;164082;164083;164084;164085;164086;164087;164088;164089;164090;164091;164092;164093;164094;164095;164096;164097;164098;164099 130694;130695;130696;130697;130698;130699;130700 130697 2494 7 GMGLSLMR Unmodified 863.43573 0.43572874 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.015 64.107 2 0.0067843 73146 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 97.068 58.866 182080000 0 0 0 4808500 4396400 25566000 6773100 9858400 5190200 16836000 17863000 16515000 7920400 16988000 49361000 19564 1565 17823 164100;164101;164102;164103;164104;164105;164106;164107;164108;164109;164110;164111 130701;130702;130703;130704;130705;130706;130707 130703 7 GMGLSMGTMICGWDK Oxidation (M) 1658.6925 0.69249007 1231 P28074 PSMB5 Proteasome subunit beta type-5 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 88.042 81.556 2 0.001837 103290 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.563 59.591 17518000 5411200 12107000 0 0 0 0 0 0 0 0 0 0 0 0 0 19565 1231 17824 164112;164113 130708;130709 130708 1824 2 GMGLSMGTMICGWDK Unmodified 1642.6976 0.69757545 1231 P28074 PSMB5 Proteasome subunit beta type-5 yes yes 0 0 0 By MS/MS 2 0 1 1 92.709 84.579 2 0.0033458 109703 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.848 65.543 5173800 5173800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19566 1231 17824 164114 130710 130710 1 GMGLVNHVFTEDNLK Oxidation (M) 1688.8192 0.81920545 2124 Q06203 PPAT Amidophosphoribosyltransferase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 5 3 1 1 72.931 66.559 2;3 0.00017156 87355 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.706 84.535 180860000 139480000 33294000 8089000 0 0 0 0 0 0 0 0 0 0 0 0 19567 2124 17825 164115;164116;164117;164118;164119 130711;130712;130713;130714;130715;130716 130712 3427 5 GMGLVNHVFTEDNLK Unmodified 1672.8243 0.82429083 2124 Q06203 PPAT Amidophosphoribosyltransferase yes yes 0 0 0 By MS/MS 2 0 1 1 81.63 73.499 3 1.3039E-05 96256 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.466 81.082 65908000 65908000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19568 2124 17825 164120 130717 130717 1 GMGPGTPAGYGR Unmodified 1119.5131 0.51312744 1151 P23246 SFPQ Splicing factor, proline- and glutamine-rich yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.024 33.21 2 0.0012566 36356 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 69.375 52.835 139730000 0 0 0 7467600 6291600 6303600 14536000 0 8281800 12361000 14772000 23000000 13358000 13692000 19663000 19569 1151 17826 164121;164122;164123;164124;164125;164126;164127;164128;164129;164130;164131;164132 130718;130719;130720;130721;130722;130723;130724;130725;130726;130727;130728 130720 10 GMGPGTPAGYGR Oxidation (M) 1135.508 0.50804206 1151 P23246 SFPQ Splicing factor, proline- and glutamine-rich yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 22.514 22.553 2 0.001191 23450 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 64.841 53.478 55500000 0 0 0 4527300 5056900 6239700 10040000 5680200 6093300 8411700 0 0 9450400 0 0 19570 1151 17826 164133;164134;164135;164136;164137;164138;164139;164140 130729;130730;130731;130732;130733;130734;130735 130729 1651 7 GMGTVEGGDQSNPK Unmodified 1375.6038 0.60379294 2289 Q13428 TCOF1 Treacle protein yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 17.292 17.183 2 1.2534E-05 17615 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 112.13 107.68 170950000 0 14764000 0 9450600 8545200 8345700 7865800 10979000 7060300 13611000 16814000 23231000 17894000 12374000 20015000 19571 2289 17827 164141;164142;164143;164144;164145;164146;164147;164148;164149;164150;164151;164152;164153 130736;130737;130738;130739;130740;130741;130742;130743;130744;130745;130746 130746 11 GMGTVEGGDQSNPK Oxidation (M) 1391.5987 0.59870757 2289 Q13428 TCOF1 Treacle protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 8.2541 7.8903 2 8.481E-21 5822 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 143.96 139.18 152900000 0 8236100 0 7285300 7203400 6092800 10033000 7573200 9802700 10693000 29225000 21421000 12076000 9446700 13815000 19572 2289 17827 164154;164155;164156;164157;164158;164159;164160;164161;164162;164163;164164;164165;164166;164167 130747;130748;130749;130750;130751;130752;130753;130754;130755;130756;130757;130758;130759;130760 130752 3726 14 GMIDGSTPTITPNPNFR Oxidation (M) 1832.8727 0.87269758 4641 Q9NU22 MDN1 Midasin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.901 66.983 2 5.7623E-14 76688 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 95.401 85.075 64148000 0 0 0 3547900 3847500 6358700 5202400 3846500 3680200 6137300 4195900 8778300 7138900 5997100 5417000 19573 4641 17828 164168;164169;164170;164171;164172;164173;164174;164175;164176;164177;164178;164179 130761;130762;130763;130764;130765;130766;130767;130768;130769;130770;130771;130772 130770 6054 12 GMIDGSTPTITPNPNFR Unmodified 1816.8778 0.87778296 4641 Q9NU22 MDN1 Midasin yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 75.39 75.475 2 0.0002037 86225 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 85.288 71.031 36326000 0 0 0 0 2464700 4004500 0 5195500 3266600 4852700 4253400 6036400 2225400 4026700 0 19574 4641 17828 164180;164181;164182;164183;164184;164185;164186;164187;164188;164189 130773;130774;130775;130776;130777;130778;130779;130780 130777 8 GMITVTDPDLIEK Oxidation (M) 1446.7276 0.72759647 3 A0AVT1 UBA6 Ubiquitin-like modifier-activating enzyme 6 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.9 3.81 3 1 6 1 2 1 1 1 1 1 1 1 70.243 67.485 2 6.232E-18 85203 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.88 111.82 206570000 11534000 172960000 2028500 3263400 0 7039200 0 0 0 4399100 5346900 0 0 0 0 19575 3 17829 164190;164191;164192;164193;164194;164195;164196;164197;164198;164199 130781;130782;130783;130784;130785;130786;130787;130788;130789 130783 5 9 GMITVTDPDLIEK Unmodified 1430.7327 0.73268185 3 A0AVT1 UBA6 Ubiquitin-like modifier-activating enzyme 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 80.205 75.048 2 0.0048956 94242 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.507 62.501 414210000 12388000 400110000 1705800 0 0 0 0 0 0 0 0 0 0 0 0 19576 3 17829 164200;164201;164202 130790;130791 130790 2 GMLFKTNEEK Oxidation (M) 1211.5856 0.58562368 1623 P50452 SERPINB8 Serpin B8 yes yes 0 1 1 By MS/MS 10 0 1 1 22.621 22.607 2 0.023049 23816 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 103.56 36.881 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19577 1623 17830 164203 130792 130792 1 GMLREDAVLEYLK Oxidation (M) 1551.7967 0.79667909 1198 P26038 MSN Moesin yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 10 0 4 1 1 2 77.707 77.937 2;3 0.0036492 89506 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.184 38.045 69803000 0 0 0 0 0 0 0 0 0 0 7542100 7384200 0 0 54877000 19578 1198 17831 164204;164205;164206;164207 130793;130794 130793 1735 1 GMLSAITNVVQNTGK Oxidation (M) 1547.7977 0.79774172 3239 Q8IWE2 FAM114A1 Protein NOXP20 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 70.971 71.105 2 3.6011E-19 81022 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 108.98 86.298 66184000 0 0 0 0 3307500 8225100 0 4113100 3422600 6493000 8343300 9326900 7176800 3722200 12054000 19579 3239 17832 164208;164209;164210;164211;164212;164213;164214;164215;164216;164217 130795;130796;130797;130798;130799;130800;130801;130802;130803;130804 130797 4850 10 GMLSAITNVVQNTGK Unmodified 1531.8028 0.8028271 3239 Q8IWE2 FAM114A1 Protein NOXP20 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 84.2 84.341 2 0.0016357 97326 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.219 56.529 15673000 0 0 0 0 0 0 0 0 0 3467600 0 0 0 0 12206000 19580 3239 17832 164218;164219 130805;130806 130806 2 GMMIDEADEFVAGPQNK Unmodified 1850.8179 0.81788482 4982 Q9UL03;Q5JSJ4 INTS6;DDX26B Integrator complex subunit 6;Protein DDX26B yes no 0 0 0 By MS/MS 2 0 1 1 83.301 78.581 2 0.00016826 97708 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.289 78.186 23889000 0 23889000 0 0 0 0 0 0 0 0 0 0 0 0 0 19581 4982 17833 164220 130807 130807 0 GMMSTVTEVR 2 Oxidation (M) 1141.5107 0.51074418 2828 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog yes yes 0 2 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 18.744 18.891 2 0.0032482 19257 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 56.729 38.744 5610200 0 0 0 0 0 0 1397900 0 0 2325600 0 0 0 1886700 0 19582 2828 17834 164221;164222;164223 130808;130809;130810 130808 4466;4467 3 GMMSTVTEVR Unmodified 1109.5209 0.52091494 2828 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 47.97 48.537 2 0.0089019 53597 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.916 48.842 28828000 0 0 0 0 0 0 0 0 0 0 0 8186200 0 6189400 14452000 19583 2828 17834 164224;164225;164226;164227 130811;130812;130813 130812 3 GMNMYLTK Unmodified 956.44596 0.44595908 1771 P55786;A6NEC2 NPEPPS;NPEPPSL1 Puromycin-sensitive aminopeptidase;Puromycin-sensitive aminopeptidase-like protein yes no 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 53.707 47.754 2 0.022229 62265 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.753 49.048 348570000 136690000 208680000 3201800 0 0 0 0 0 0 0 0 0 0 0 0 19584 1771 17835 164228;164229;164230 130814;130815 130814 2 GMPETTQPDK Unmodified 1102.4965 0.49647433 694 O95817 BAG3 BAG family molecular chaperone regulator 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 17.954 18.142 2 0.0024821 18329 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 83.168 69.172 129540000 0 0 0 7482200 5900400 6792900 7055700 7923900 5191600 10519000 12290000 19185000 9655500 13672000 23869000 19585 694 17836 164231;164232;164233;164234;164235;164236;164237;164238;164239;164240;164241;164242 130816;130817;130818;130819;130820;130821;130822;130823;130824;130825;130826 130821 11 GMPPLEIVPENIK Oxidation (M) 1451.7694 0.76940171 488 O75376 NCOR1 Nuclear receptor corepressor 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.771 77.829 2 0.0016026 89897 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 58.676 43.047 116610000 0 0 0 6463400 8106000 7765400 9557600 8333200 9409300 10361000 9635200 11186000 12111000 7455800 16223000 19586 488 17837 164243;164244;164245;164246;164247;164248;164249;164250;164251;164252;164253;164254 130827;130828;130829;130830;130831;130832;130833;130834;130835;130836;130837 130828 631 11 GMPQEER Unmodified 845.37015 0.3701516 2347 Q13838 DDX39B Spliceosome RNA helicase DDX39B yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 8.7938 9.0704 2 0.032282 7016 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 73.039 31.537 19032000 0 0 0 0 0 0 0 0 0 0 18683000 0 348310 0 0 19587 2347 17838 164255;164256 130838 130838 1 GMPTGEAMVAFESR Oxidation (M) 1497.6592 0.65919933 4639 Q9NTZ6 RBM12 RNA-binding protein 12 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 66.958 67.009 2 0.0048416 76108 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.743 31.914 45086000 0 0 0 2787300 2304700 2133500 3648400 2392000 1634700 3219600 4366200 0 3252000 4682400 14665000 19588 4639 17839 164257;164258;164259;164260;164261;164262;164263;164264;164265;164266;164267 130839 130839 6049 1 GMPYGGRGDPVNVSR Unmodified 1560.7467 0.74670921 1146 P22735 TGM1 Protein-glutamine gamma-glutamyltransferase K yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 42.23 42.337 3 1.7019E-05 48021 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 61.641 47.924 140950000 0 0 0 48967000 6831200 5814300 8055800 18595000 0 10134000 11622000 18377000 12552000 0 0 19589 1146 17840 164268;164269;164270;164271;164272;164273;164274;164275;164276 130840;130841;130842;130843 130843 4 GMQDLVEDFK Oxidation (M) 1196.5383 0.53833914 58 CON__P02538;P02538 KRT6A Keratin, type II cytoskeletal 6A yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.195 58.31 2 0.0015665 66349 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 84.213 53.958 + 744590000 0 0 0 211230000 23717000 23664000 55720000 62348000 20742000 37742000 32760000 54059000 183740000 23087000 15774000 19590 58 17841 164277;164278;164279;164280;164281;164282;164283;164284;164285;164286;164287;164288 130844;130845;130846;130847;130848;130849;130850;130851;130852;130853;130854;130855;130856;130857;130858 130851 66 15 GMQDLVEDFK Unmodified 1180.5434 0.54342452 58 CON__P02538;P02538 KRT6A Keratin, type II cytoskeletal 6A yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 77.774 77.826 2 0.0011159 90113 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 126.07 98.937 + 891990000 0 0 0 208710000 27849000 0 44866000 136370000 0 60141000 42796000 71594000 230310000 34728000 34618000 19591 58 17841 164289;164290;164291;164292;164293;164294;164295;164296;164297;164298 130859;130860;130861;130862;130863;130864;130865;130866;130867;130868;130869;130870 130870 6 GMQLMHANAQR Unmodified 1255.5914 0.59139454 978 P13284 IFI30 Gamma-interferon-inducible lysosomal thiol reductase yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 2 1 1 1 28.191 28.676 2;3 0.00089727 29863 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.478 53.697 53841000 0 0 0 0 0 0 0 9601500 0 0 0 21643000 6389800 8128100 8078300 19592 978 17842 164299;164300;164301;164302;164303;164304 130871;130872 130871 2 GMSDVAQEK Unmodified 963.43315 0.43314579 2228 Q13045 FLII Protein flightless-1 homolog yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 15.286 14.898 2 0.019416 17394 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.478 35.175 100480000 0 48988000 0 0 0 0 0 0 0 0 0 13875000 11439000 11345000 14832000 19593 2228 17843 164305;164306;164307;164308;164309 130873;130874 130873 2 GMSLLVR Unmodified 774.44219 0.44219433 2748;2888 Q6IN85;Q5MIZ7 SMEK1;SMEK2 Serine/threonine-protein phosphatase 4 regulatory subunit 3A;Serine/threonine-protein phosphatase 4 regulatory subunit 3B no no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 55.087 55.38 2 0.02425 61490 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.957 61.252 29577000 0 0 0 0 0 3216700 1807800 530250 0 2660900 5316700 4791400 0 3366700 7886600 19594 2888;2748 17844 164310;164311;164312;164313;164314;164315;164316;164317 130875;130876;130877 130876 3 GMSLNLEPDNVGVVVFGNDK Oxidation (M) 2119.0256 0.025569409 1192 P25705 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 0 1 0 By MS/MS 10 0 1 1 86.498 86.629 2 0.00022292 100672 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.704 38.094 3402300 0 0 0 0 0 0 0 0 0 0 0 3402300 0 0 0 19595 1192 17845 164318 130878 130878 1724 1 GMSNNTPQLNR Unmodified 1230.5775 0.57751861 4779 Q9NZN8 CNOT2 CCR4-NOT transcription complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.424 27.622 2 0.0003315 29620 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 88.948 68.619 112200000 0 0 0 5351900 4472100 6430300 7963200 6924400 5745500 12097000 11973000 12458000 11104000 13441000 14241000 19596 4779 17846 164319;164320;164321;164322;164323;164324;164325;164326;164327;164328;164329;164330 130879;130880;130881;130882;130883;130884 130880 6 GMSNNTPQLNR Oxidation (M) 1246.5724 0.57243324 4779 Q9NZN8 CNOT2 CCR4-NOT transcription complex subunit 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 18.743 18.891 2 0.0022896 19486 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 63.816 52.595 58946000 0 0 0 4910000 7248700 4985300 5603900 4730800 4964500 6539100 6146600 9171400 0 4645300 0 19597 4779 17846 164331;164332;164333;164334;164335;164336;164337;164338;164339;164340 130885;130886;130887;130888 130888 6147 4 GMSSTFSQR Unmodified 999.44438 0.44437918 5250 Q9Y5U2 TSSC4 Protein TSSC4 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS 10 0 4 1 1 1 1 23.508 24.052 2 0.017218 24446 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.872 35.214 22738000 0 0 0 0 0 0 0 0 0 0 4718200 5959100 2046900 0 10014000 19598 5250 17847 164341;164342;164343;164344 130889 130889 1 GMTSESDSIGLTPGEK Oxidation (M) 1623.7298 0.72978132 1694 P52701 MSH6 DNA mismatch repair protein Msh6 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 42.837 41.631 2 3.6033E-23 52271 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.39 112.7 293500000 8035800 55419000 1599400 12024000 13260000 20960000 19611000 18234000 16350000 20169000 29708000 20256000 21910000 14614000 21354000 19599 1694 17848 164345;164346;164347;164348;164349;164350;164351;164352;164353;164354;164355;164356;164357;164358;164359;164360 130890;130891;130892;130893;130894;130895;130896;130897;130898;130899;130900;130901;130902;130903;130904;130905 130893 2742 15 GMTSESDSIGLTPGEK Unmodified 1607.7349 0.7348667 1694 P52701 MSH6 DNA mismatch repair protein Msh6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.91 3.42 2 1 8 1 2 1 1 1 1 1 1 1 1 52.398 50.747 2 7.3252E-46 64055 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 198.55 173.16 699580000 9114900 449770000 0 20274000 16774000 36149000 15226000 23447000 17517000 0 0 55896000 0 0 55415000 19600 1694 17848 164361;164362;164363;164364;164365;164366;164367;164368;164369;164370;164371 130906;130907;130908;130909;130910;130911;130912;130913;130914;130915;130916;130917 130909 12 GMTSLQCDCTEK Oxidation (M) 1444.5633 0.56325004 4145 Q9BTE7 DCUN1D5 DCN1-like protein 5 yes yes 0 1 0 By MS/MS 2 0 1 1 19 15.517 2 0.0038077 20298 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.379 72.963 4611200 0 4611200 0 0 0 0 0 0 0 0 0 0 0 0 0 19601 4145 17849 164372 130918 130918 5641 1 GMTSLQCDCTEK Unmodified 1428.5683 0.56833541 4145 Q9BTE7 DCUN1D5 DCN1-like protein 5 yes yes 0 0 0 By MS/MS 2 0 1 1 32.018 27.484 2 6.6102E-07 35997 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 137.98 124.21 19298000 0 19298000 0 0 0 0 0 0 0 0 0 0 0 0 0 19602 4145 17849 164373 130919;130920 130920 2 GMTSSQWFK Unmodified 1070.4855 0.48551571 4348 Q9H1E1 RNASE7 Ribonuclease 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 57.174 57.296 2 0.024533 66311 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 50.607 46.672 41863000 0 0 0 21948000 0 0 0 3968900 0 3588100 5178900 7179700 0 0 0 19603 4348 17850 164374;164375;164376;164377;164378 130921;130922 130922 2 GMTVEGLK Unmodified 833.43169 0.43168922 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.409 38.588 2 0.0096192 41380 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.305 36.353 243580000 0 0 0 9024000 15972000 15106000 20449000 15213000 11678000 22872000 29143000 22651000 17663000 21188000 42617000 19604 848 17851 164379;164380;164381;164382;164383;164384;164385;164386;164387;164388;164389;164390 130923;130924;130925;130926;130927;130928 130924 6 GMTVEGLK Oxidation (M) 849.4266 0.42660385 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.711 20.906 2 0.039668 21711 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 44.117 7.5604 102670000 0 0 0 7935600 5442500 8120800 7600800 6490400 5391400 9566000 14084000 17458000 0 9495000 11087000 19605 848 17851 164391;164392;164393;164394;164395;164396;164397;164398;164399;164400;164401;164402 130929;130930 130929 2 GMVIAETK Unmodified 847.44734 0.44733929 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching 10 0 5 1 1 1 1 1 27.855 28.324 2 0.032702 30592 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 54.157 25.259 24493000 0 0 0 0 0 0 0 5740500 0 0 6594700 3352100 0 4448000 4357700 19606 2291 17852 164403;164404;164405;164406;164407 130931 130931 1 GMVSAYPR Unmodified 879.42727 0.42727255 1332 P33991 MCM4 DNA replication licensing factor MCM4 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 31.464 31.875 2 0.050242 33583 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.835 21.009 35459000 0 0 0 0 0 0 0 0 0 7031400 9354900 0 0 5875200 13197000 19607 1332 17853 164408;164409;164410;164411 130932 130932 1 GMYDVGLPSRK Unmodified 1221.6176 0.61759251 2599 Q16222 UAP1 UDP-N-acetylhexosamine pyrophosphorylase;UDP-N-acetylgalactosamine pyrophosphorylase;UDP-N-acetylglucosamine pyrophosphorylase yes yes 0 0 1 By MS/MS 2 0 1 1 58.168 49.962 3 0.011528 68066 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.73 39.163 23929000 23929000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19608 2599 17854 164412 130933 130933 1 GMYGIENEVFLSLPCILNARGLTSVINQK Unmodified 3235.6733 0.67333984 836 P07195 LDHB L-lactate dehydrogenase B chain yes yes 0 0 1 By MS/MS 3 0 1 1 100.6 97.121 3 0.0055058 116661 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 26.659 21.97 2447300 0 2447300 0 0 0 0 0 0 0 0 0 0 0 0 0 19609 836 17855 164413 130934 130934 1 GNAAGSSQTGDALGK Unmodified 1332.627 0.62697123 4004 Q99081 TCF12 Transcription factor 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.845 15.015 2 4.0239E-27 13783 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 134.3 116.08 78100000 0 0 0 5106400 3452200 3113600 5950000 6403500 4058600 6738300 9582400 7408500 7189300 6691400 12406000 19610 4004 17856 164414;164415;164416;164417;164418;164419;164420;164421;164422;164423;164424;164425 130935;130936;130937;130938;130939;130940;130941;130942;130943;130944;130945;130946 130938 12 GNAAWQEQLK Unmodified 1143.5673 0.5672715 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 44.49 43.14 2 9.2716E-05 55576 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 150.24 129.68 2253100000 34960000 1747700000 8180500 22291000 23809000 30606000 0 31448000 24895000 53752000 54794000 55184000 39633000 46179000 79627000 19611 848 17857 164426;164427;164428;164429;164430;164431;164432;164433;164434;164435;164436;164437;164438;164439;164440 130947;130948;130949;130950;130951;130952;130953;130954;130955;130956;130957;130958;130959;130960;130961 130950 14 GNAEGSSDEEGK Unmodified 1178.4687 0.46873925 1674 P51858 HDGF Hepatoma-derived growth factor yes yes 0 0 0 By MS/MS 1 0 1 1 106.33 111.59 2 1.3231E-10 92240 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 126.39 106.25 80851000 80851000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19612 1674 17858 164441 130962 130962 1 GNAGGIQPDLLISLTAPK Unmodified 1763.9781 0.97814893 3412 Q8NCW5 APOA1BP NAD(P)H-hydrate epimerase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.4 3.68 4 1 10 3 2 1 1 1 1 1 1 1 1 1 1 92.411 91.293 2;3 5.7188E-11 113493 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.9 95.558 1491000000 0 1394400000 7844600 0 1011000 2106600 1332100 1482400 1187700 3937100 11691000 10665000 0 8917700 46435000 19613 3412 17859 164442;164443;164444;164445;164446;164447;164448;164449;164450;164451;164452;164453;164454;164455;164456 130963;130964;130965;130966;130967;130968;130969;130970 130965 7 GNAGQSNYGFANSAMER Oxidation (M) 1788.7486 0.7485597 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 37.388 37.57 2 1.7917E-41 40377 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 148.62 143.15 265270000 0 0 0 12019000 9197200 33817000 12932000 0 9764900 26702000 38970000 34925000 23793000 24820000 38328000 19614 1565 17860 164457;164458;164459;164460;164461;164462;164463;164464;164465;164466;164467 130971;130972;130973;130974;130975;130976;130977;130978;130979;130980;130981;130982 130974 2495 12 GNAGQSNYGFANSAMER Unmodified 1772.7536 0.75364508 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 49.64 49.864 2 1.0261E-31 55812 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 122.66 117.35 414590000 0 0 0 19587000 0 50215000 19663000 24415000 0 26477000 35671000 60478000 24885000 39528000 113670000 19615 1565 17860 164468;164469;164470;164471;164472;164473;164474;164475;164476;164477 130983;130984;130985;130986;130987;130988;130989;130990;130991 130989 9 GNAIDEADIPPPVAIGK Unmodified 1675.8781 0.87810054 2921 Q6P1N0 CC2D1A Coiled-coil and C2 domain-containing protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 77.195 77.211 2 0.048143 89246 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 35.204 25.516 39559000 0 0 0 2766300 4034600 3512100 3401200 4604100 0 4419700 7073400 5965600 3781400 0 0 19616 2921 17861 164478;164479;164480;164481;164482;164483;164484;164485;164486 130992 130992 1 GNAMVEEGHFAAEDVK Oxidation (M) 1718.757 0.75699912 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 4.5 3.5 7 3 4 2 7 1 1 1 1 1 43.131 39.322 2;3 3.9568E-61 51230 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 180.48 164.85 321220000 17513000 265390000 8773200 0 0 8937800 6223600 0 0 0 8693400 0 0 5688900 0 19617 2344 17862 164487;164488;164489;164490;164491;164492;164493;164494;164495;164496;164497;164498;164499;164500 130993;130994;130995;130996;130997;130998;130999 130995 3809 6 GNAMVEEGHFAAEDVK Unmodified 1702.7621 0.7620845 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.82 3.83 4 2 5 1 4 1 1 1 1 1 1 53.19 50.291 2;3 3.7285E-58 65967 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 174.95 152.92 351210000 17178000 260510000 6677300 0 0 13749000 0 0 0 9081200 14169000 0 0 7069600 22783000 19618 2344 17862 164501;164502;164503;164504;164505;164506;164507;164508;164509;164510;164511 131000;131001;131002;131003;131004;131005;131006;131007;131008;131009;131010;131011;131012;131013 131003 14 GNAPEGLPQLMEVVR Oxidation (M) 1624.8243 0.82429083 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 78.218 78.298 2 0.00022944 90368 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 65.842 53.628 56993000 0 0 0 0 8710800 0 0 0 5175800 10995000 7967200 15671000 0 8473300 0 19619 19 17863 164512;164513;164514;164515;164516;164517;164518;164519 131014;131015;131016;131017;131018;131019;131020 131020 15 6 GNAPEGLPQLMEVVR Unmodified 1608.8294 0.8293762 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 87.156 87.264 2 0.00053599 101193 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 63.091 52.186 45058000 0 0 0 0 2191900 2758900 1350500 3929400 2209800 5271100 3708200 4343200 2431400 4169400 12694000 19620 19 17863 164520;164521;164522;164523;164524;164525;164526;164527;164528;164529;164530 131021;131022;131023;131024;131025;131026;131027 131021 7 GNDIIAAAK Unmodified 871.47633 0.47633123 1073 P18206 VCL Vinculin yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 33.436 29.294 2 0.0074156 36533 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 95.815 58.656 1111100000 0 1104800000 6278000 0 0 0 0 0 0 0 0 0 0 0 0 19621 1073 17864 164531;164532;164533 131028;131029 131029 1 GNDISSGTVLSDYVGSGPPK Unmodified 1948.9378 0.93780026 1269 P30086 PEBP1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.39 3.71 1 3 2 12 1 5 1 1 1 1 1 1 1 1 1 1 1 1 78.754 77.919 2;3 0 88140 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 246.96 234.9 11022000000 130540000 9958800000 0 34259000 7876000 5360100 10168000 12209000 8095900 12692000 173220000 161950000 9694100 126390000 371220000 19622 1269 17865 164534;164535;164536;164537;164538;164539;164540;164541;164542;164543;164544;164545;164546;164547;164548;164549;164550;164551 131030;131031;131032;131033;131034;131035;131036;131037;131038;131039;131040;131041;131042;131043;131044;131045;131046;131047;131048;131049 131047 19 GNDPNVNIVPK Unmodified 1165.6091 0.60913632 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.39 45.56 2 0.00034656 51277 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 106.88 97.666 425860000 0 0 0 22339000 26311000 26235000 30923000 24578000 28521000 43170000 47286000 55154000 39388000 33551000 48408000 19623 5216 17866 164552;164553;164554;164555;164556;164557;164558;164559;164560;164561;164562;164563 131050;131051;131052;131053;131054;131055;131056;131057;131058;131059;131060;131061 131052 11 GNDQVRFELSCYSLAPQIK Unmodified 2224.0947 0.094652027 737 P00966 ASS1 Argininosuccinate synthase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 4 3.46 3 1 1 1 1 1 85.487 81.694 3 0.00018665 103501 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.034 51.675 69782000 18360000 25923000 12386000 0 0 0 0 0 0 0 0 0 0 0 13113000 19624 737 17867 164564;164565;164566;164567 131062;131063;131064;131065 131064 4 GNDTFVTLDEILR Unmodified 1491.7569 0.75692277 1614 P49959 MRE11A Double-strand break repair protein MRE11A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 91.633 91.78 2 0.00081634 106413 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.813 71.146 8908600 0 0 0 0 0 0 0 495460 0 2098800 1614200 953810 0 726080 3020200 19625 1614 17868 164568;164569;164570;164571;164572;164573 131066;131067;131068;131069 131068 4 GNDTPLALESTNTEK Unmodified 1588.758 0.75804498 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 50.76 49.628 2 7.8165E-31 55429 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 179.6 155.22 475680000 12922000 95486000 0 20022000 18079000 51354000 17742000 23700000 16037000 26898000 31021000 58671000 27627000 21542000 54581000 19626 3119 17869 164574;164575;164576;164577;164578;164579;164580;164581;164582;164583;164584;164585;164586;164587;164588 131070;131071;131072;131073;131074;131075;131076;131077;131078;131079;131080;131081;131082;131083;131084;131085;131086;131087 131082 18 GNDVAFHFNPR Unmodified 1272.6 0.59996862 1065 P17931 LGALS3 Galectin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 2 2 2 1 1 2 2 52.717 52.83 2;3 0.0024325 59497 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 53.028 49.816 613270000 0 0 0 23331000 9008800 54819000 22475000 34420000 12269000 55027000 65904000 81952000 42408000 58163000 153490000 19627 1065 17870 164589;164590;164591;164592;164593;164594;164595;164596;164597;164598;164599;164600;164601;164602;164603;164604;164605;164606;164607;164608;164609;164610 131088;131089;131090;131091;131092;131093;131094;131095;131096;131097;131098;131099;131100;131101;131102;131103;131104 131090 12 GNECFQK Unmodified 881.37015 0.3701516 1313 P31948 STIP1 Stress-induced-phosphoprotein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.6 3.67 3 7 1 1 1 1 1 1 1 1 1 1 8.983 8.1378 2 0.011424 11491 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 126.16 115.85 1031600000 70798000 944490000 2939100 0 677460 897670 1232900 0 0 720830 4447500 1706200 0 0 3677400 19628 1313 17871 164611;164612;164613;164614;164615;164616;164617;164618;164619;164620 131105;131106;131107 131107 2 GNEDLSNNGSLHSANSTTNLAAIEPQPSPPHSEPPSVEQPPKPK Unmodified 4569.2008 0.20079126 3134 Q86TC9 MYPN Myopalladin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 66.889 67.065 5 3.3052E-08 76832 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 24.93 23.892 63096000 0 0 0 0 4706500 0 5328500 7916900 0 0 9501300 9491200 9203100 7586700 9361600 19629 3134 17872 164621;164622;164623;164624;164625;164626;164627;164628 131108;131109;131110;131111;131112;131113;131114;131115 131114 8 GNEEAQIFRPLK Unmodified 1400.7412 0.74121312 2481 Q15029 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 25 2 2 2 2 2 2 2 2 2 3 2 2 57.431 57.556 2;3 3.7639E-42 65775 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 244.28 215.33 1379900000 0 0 0 54885000 55602000 148780000 58580000 67990000 100950000 121760000 150830000 100120000 183160000 173550000 163700000 19630 2481 17873 164629;164630;164631;164632;164633;164634;164635;164636;164637;164638;164639;164640;164641;164642;164643;164644;164645;164646;164647;164648;164649;164650;164651;164652;164653 131116;131117;131118;131119;131120;131121;131122;131123;131124;131125;131126;131127;131128;131129;131130 131126 11 GNEEGDSSGFEHVFSGEVK Unmodified 2009.8603 0.86027822 1119 P21128 ENDOU Poly(U)-specific endoribonuclease yes yes 0 0 0 By MS/MS 10 0 1 1 67.123 66.445 3 0.0037302 76940 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 22.635 18.666 4507400 0 0 0 4507400 0 0 0 0 0 0 0 0 0 0 0 19631 1119 17874 164654 131131 131131 1 GNEFEDYCLK Unmodified 1273.5285 0.52850274 1199 P26196 DDX6 Probable ATP-dependent RNA helicase DDX6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 57.598 56.94 2 0.0016572 63998 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 92.062 87.097 434790000 0 259280000 0 0 9848000 14830000 9532700 11878000 10309000 15737000 17739000 21501000 17262000 20378000 26493000 19632 1199 17875 164655;164656;164657;164658;164659;164660;164661;164662;164663;164664;164665;164666;164667;164668 131132;131133;131134;131135;131136;131137;131138;131139;131140;131141;131142;131143;131144;131145 131136 13 GNEFFCEVDEDYIQDK Unmodified 2006.8204 0.82038724 1956 P67870 CSNK2B Casein kinase II subunit beta yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 81.002 81.217 2 1.0521E-09 93617 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 109.22 100.81 17017000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17017000 19633 1956 17876 164669;164670 131146;131147 131146 2 GNEIEPNFSATRK Unmodified 1461.7212 0.72120596 3116 Q7Z6K5 ARPIN Arpin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 39.449 39.071 2;3 0.0022533 42688 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 46.387 39.701 164690000 0 0 31580000 5605900 4414300 10341000 10523000 7055900 9414000 13214000 17868000 13711000 9469800 8476400 23017000 19634 3116 17877 164671;164672;164673;164674;164675;164676;164677;164678;164679;164680;164681;164682;164683;164684 131148;131149;131150;131151;131152;131153;131154;131155;131156 131156 8 GNEILELK Unmodified 914.5073 0.50729701 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 55.357 54.811 2 0.0082674 62506 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 86.794 49.236 959210000 0 534160000 0 30377000 25738000 44447000 34704000 31271000 0 55867000 0 0 58635000 60300000 83709000 19635 965 17878 164685;164686;164687;164688;164689;164690;164691;164692;164693;164694 131157;131158;131159;131160;131161;131162;131163;131164;131165;131166 131162 7 GNEIVLSAGSTPR Unmodified 1299.6783 0.67827852 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.829 49.985 2 0.0015173 56441 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 62.924 50.877 348780000 0 0 0 15055000 21282000 25652000 21926000 22318000 20911000 30422000 32589000 48173000 27284000 29201000 53970000 19636 2392 17879 164695;164696;164697;164698;164699;164700;164701;164702;164703;164704;164705;164706 131167;131168;131169;131170;131171;131172;131173;131174;131175;131176;131177 131173 10 GNELESIAFR Unmodified 1134.5669 0.56693715 3153 Q86US8 SMG6 Telomerase-binding protein EST1A yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 71.005 71.076 2 0.0038686 82021 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 74.92 59.769 13430000 0 0 0 0 2071300 0 2455300 0 0 0 0 4263700 2657700 1982500 0 19637 3153 17880 164707;164708;164709;164710;164711 131178;131179 131179 2 GNENANGAPAITLLIR Unmodified 1622.874 0.87401821 5231 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 84.835 84.941 2 0.00010622 98538 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 90.926 81.737 98967000 0 0 0 0 5976600 11314000 7309800 6813000 7450100 9316600 10576000 10346000 5597500 7925400 16341000 19638 5231 17881 164712;164713;164714;164715;164716;164717;164718;164719;164720;164721;164722 131180;131181;131182;131183;131184;131185;131186;131187;131188;131189;131190;131191;131192;131193 131191 14 GNENANGAPAITLLIREK Unmodified 1880.0116 0.011574324 5231 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 0 1 By MS/MS 2 0 1 1 85.956 77.826 3 0.017621 101444 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 32.797 23.048 24252000 24252000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19639 5231 17882 164723 131194 131194 1 GNEPGSDRSPSPSK Unmodified 1413.6484 0.64843495 2810 Q5VT52 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching 10 0 15 1 1 1 1 1 1 2 2 2 1 2 7.0928 7.2652 2;3 0.0002331 5470 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 77.078 55.166 135470000 0 0 0 0 1325300 1769100 2201200 2170400 2740100 3771400 37341000 27590000 27909000 2674300 25981000 19640 2810 17883 164724;164725;164726;164727;164728;164729;164730;164731;164732;164733;164734;164735;164736;164737;164738 131195;131196;131197 131196 2 GNEPPPPPL Unmodified 916.46543 0.46543219 4791 Q9P0J7 KCMF1 E3 ubiquitin-protein ligase KCMF1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 8.71 3.15 1 6 1 1 1 1 1 1 1 62.483 63.375 2 0.0073225 89564 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 94.539 77.268 29297000 15843000 0 0 0 1700100 0 1673600 844180 0 0 2606700 0 0 1956400 4673200 19641 4791 17884 164739;164740;164741;164742;164743;164744;164745 131198;131199 131198 2 GNEQESMAR Unmodified 1020.4295 0.42945739 1826 P61011 SRP54 Signal recognition particle 54 kDa protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 7.3712 7.2355 2 0.0031425 5415 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 133.55 97.668 66207000 0 11980000 0 3763300 3213500 5000000 5488700 7423000 4892500 2968800 6443800 3745300 3655800 2255000 5377100 19642 1826 17885 164746;164747;164748;164749;164750;164751;164752;164753;164754;164755;164756;164757;164758 131200;131201;131202;131203;131204;131205;131206;131207;131208;131209;131210 131200 11 GNEQESMARLK Oxidation (M) 1277.6034 0.60339901 1826 P61011 SRP54 Signal recognition particle 54 kDa protein yes yes 0 1 1 By matching By MS/MS 2 0 2 1 1 11.84 8.2302 3 0.020563 11397 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.278 57.207 26950000 2149600 24800000 0 0 0 0 0 0 0 0 0 0 0 0 0 19643 1826 17886 164759;164760 131211 131211 0 GNEQESMARLK Unmodified 1261.6085 0.60848439 1826 P61011 SRP54 Signal recognition particle 54 kDa protein yes yes 0 0 1 By MS/MS 3 0 1 1 27.094 22.879 3 0.015044 28653 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 71.221 55.844 4714500 0 4714500 0 0 0 0 0 0 0 0 0 0 0 0 0 19644 1826 17886 164761 131212 131212 0 GNFHAVYR Unmodified 962.47225 0.47224891 797 P05109 S100A8 Protein S100-A8;Protein S100-A8, N-terminally processed yes yes 0 0 0 By MS/MS 10 0 1 1 22.565 22.405 2 0.015253 23535 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 69.176 48.894 53146000 0 0 0 53146000 0 0 0 0 0 0 0 0 0 0 0 19645 797 17887 164762 131213 131213 1 GNFHAVYRDDLK Unmodified 1433.7052 0.70516197 797 P05109 S100A8 Protein S100-A8;Protein S100-A8, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 3 1 1 1 2 2 2 1 1 2 35.538 35.816 2;3 0.00061011 40379 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 100.82 73.077 1323300000 0 0 0 47045000 0 174090000 39372000 80888000 89965000 102220000 223440000 209970000 135820000 89775000 130750000 19646 797 17888 164763;164764;164765;164766;164767;164768;164769;164770;164771;164772;164773;164774;164775;164776;164777;164778;164779 131214;131215;131216;131217;131218;131219;131220;131221;131222;131223;131224 131224 5 GNFHAVYRDDLKK Unmodified 1561.8001 0.80012499 797 P05109 S100A8 Protein S100-A8;Protein S100-A8, N-terminally processed yes yes 0 0 2 By MS/MS 10 0 1 1 30.819 30.472 4 0.04106 34020 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 24.935 21.305 59990000 0 0 0 59990000 0 0 0 0 0 0 0 0 0 0 0 19647 797 17889 164780 131225 131225 1 GNFILSAGVDK Unmodified 1119.5924 0.59242362 4270 Q9BZK7 TBL1XR1 F-box-like/WD repeat-containing protein TBL1XR1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 2 1 67.632 65.642 2 0.00076664 73854 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.379 59.993 692200000 53946000 411230000 9611100 0 0 15284000 20468000 23333000 16975000 25708000 33084000 36707000 0 0 45859000 19648 4270 17890 164781;164782;164783;164784;164785;164786;164787;164788;164789;164790;164791;164792;164793;164794;164795;164796;164797 131226;131227;131228;131229;131230;131231;131232;131233;131234;131235;131236;131237;131238;131239;131240;131241;131242;131243;131244 131233 17 GNFLEIK Unmodified 819.44905 0.44905385 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 57.828 57.946 2 0.03372 66110 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 71.715 38.357 392170000 0 0 0 18801000 23021000 33807000 23463000 25538000 18661000 36751000 35486000 49379000 45859000 32801000 48603000 19649 2451 17891 164798;164799;164800;164801;164802;164803;164804;164805;164806;164807;164808;164809 131245;131246 131246 2 GNFNYIEFTR Unmodified 1259.5935 0.59348625 229 P19105;O14950 MYL12A;MYL12B Myosin regulatory light chain 12A;Myosin regulatory light chain 12B yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.133 75.192 2 9.8271E-10 86831 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 151.44 140.73 3071700000 0 0 0 126110000 189170000 266220000 215280000 206990000 236070000 320670000 277290000 497070000 191850000 171000000 373980000 19650 229 17892 164810;164811;164812;164813;164814;164815;164816;164817;164818;164819;164820;164821 131247;131248;131249;131250;131251;131252;131253;131254;131255;131256;131257;131258;131259 131247 11 GNFPTLELQPSLIVK Unmodified 1654.9294 0.92940782 3880 Q96IP4 FAM46A Protein FAM46A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 90.661 90.803 2 0.001297 105424 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 61.435 50.53 13882000 0 0 0 0 0 1292500 0 1294900 1152100 2567600 2355800 0 0 1252000 3967100 19651 3880 17893 164822;164823;164824;164825;164826;164827;164828 131260;131261;131262;131263 131260 4 GNFQTIGLSAAAR Unmodified 1304.6837 0.68369824 803 P05187;P10696 ALPP;ALPPL2 Alkaline phosphatase, placental type;Alkaline phosphatase, placental-like yes no 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 63.219 63.453 2 0.0070219 71727 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 46.352 35.188 10051000 0 0 0 0 0 0 0 0 0 0 3678000 0 2953500 3419900 0 19652 803 17894 164829;164830;164831 131264;131265 131264 2 GNFSPLELDNVLLK Unmodified 1557.8403 0.84025847 2695 Q52LW3 ARHGAP29 Rho GTPase-activating protein 29 yes yes 0 0 0 By MS/MS 10 0 1 1 92.484 92.621 2 0.02798 107352 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.897 37.364 2442500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2442500 19653 2695 17895 164832 131266 131266 1 GNFSSFMQK Unmodified 1044.4699 0.46986564 2125 Q06210 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 55.184 53.391 2 0.0096112 72846 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.833 12.578 247880000 154130000 0 12977000 0 0 0 0 10381000 0 0 0 0 11785000 19089000 39521000 19654 2125 17896 164833;164834;164835;164836;164837;164838;164839 131267;131268;131269;131270;131271 131268 5 GNFSSFMQK Oxidation (M) 1060.4648 0.46478027 2125 Q06210 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes yes 0 1 0 By MS/MS 3 0 1 1 37.698 33.098 2 0.0074472 41756 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 89.752 80.807 12636000 0 12636000 0 0 0 0 0 0 0 0 0 0 0 0 0 19655 2125 17896 164840 131272 131272 3430 1 GNFTLPEVAECFDEITYVELQK Unmodified 2601.2309 0.23087074 2046 Q00839 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.3 0.458 7 3 4 5 1 100.1 95.298 2;3 7.7079E-32 118423 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 154.69 145.89 729680000 435390000 288970000 5329000 0 0 0 0 0 0 0 0 0 0 0 0 19656 2046 17897 164841;164842;164843;164844;164845;164846;164847;164848;164849;164850 131273;131274;131275;131276;131277;131278;131279 131274 7 GNFVSPVK Unmodified 846.45995 0.45995289 893 P09668 CTSH Pro-cathepsin H;Cathepsin H mini chain;Cathepsin H;Cathepsin H heavy chain;Cathepsin H light chain yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 36.641 36.711 2 0.025287 41178 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 58.819 39.864 71343000 0 0 0 21899000 4496600 4104200 5461600 4309600 3160900 5234200 9640600 0 6976900 6058900 0 19657 893 17898 164851;164852;164853;164854;164855;164856;164857;164858;164859;164860 131280 131280 1 GNFYEASDWFK Unmodified 1362.5881 0.58806652 2945 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.72 2 13 1 1 1 1 1 1 1 1 1 1 1 1 2 1 82.237 81.81 2 0.00064166 94761 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 78.556 59.776 125360000 0 46451000 2059400 1087300 2178100 3481000 1386200 4810400 4144600 6541700 7776000 9776200 5629300 9621800 20419000 19658 2945 17899 164861;164862;164863;164864;164865;164866;164867;164868;164869;164870;164871;164872;164873;164874;164875 131281;131282;131283;131284;131285;131286;131287;131288;131289;131290;131291;131292 131287 12 GNGIVECLGPK Unmodified 1142.5754 0.57539335 4838 Q9UBE0 SAE1 SUMO-activating enzyme subunit 1;SUMO-activating enzyme subunit 1, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.83 3.67 3 1 2 1 2 1 1 1 54.183 50.574 2 0.00046541 62456 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 102.07 96.335 1304900000 12083000 1238500000 6283200 0 0 0 0 0 0 0 12185000 0 0 0 35859000 19659 4838 17900 164876;164877;164878;164879;164880;164881 131293;131294;131295;131296;131297;131298;131299;131300;131301 131298 8 GNGTQPVLSGTGEETVR Unmodified 1700.8329 0.83294126 5225 Q9Y597 KCTD3 BTB/POZ domain-containing protein KCTD3 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 43.291 43.396 2 0.0023268 48445 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 46.88 31.34 11149000 0 0 0 0 0 5030300 0 0 0 6119000 0 0 0 0 0 19660 5225 17901 164882;164883 131302 131302 1 GNGTSMISLIIPPK Oxidation (M) 1442.7803 0.78030075 1902 P62495 ETF1 Eukaryotic peptide chain release factor subunit 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 77.085 77.177 2 0.0026494 89272 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 46.706 37.371 71682000 0 0 0 0 3678300 7477500 8342900 4500800 4998000 9424000 9601700 9956800 7051500 6650300 0 19661 1902 17902 164884;164885;164886;164887;164888;164889;164890;164891;164892;164893 131303;131304;131305 131304 3078 1 GNGTSMISLIIPPK Unmodified 1426.7854 0.78538612 1902 P62495 ETF1 Eukaryotic peptide chain release factor subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 87.017 87.164 2 0.011181 100579 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 39.625 31.7 37061000 0 0 0 0 0 5450600 2406700 2628500 1362900 3917500 3278800 3499700 0 3669000 10848000 19662 1902 17902 164894;164895;164896;164897;164898;164899;164900;164901;164902 131306;131307;131308;131309 131306 4 GNHDGAVQQYIR Unmodified 1356.6535 0.65346075 4360 Q9H270 VPS11 Vacuolar protein sorting-associated protein 11 homolog yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 34.795 34.862 3 0.0071238 38263 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 33.968 13.505 20631000 0 0 0 2646500 0 4191800 3667700 0 2482900 0 0 0 4863500 2778700 0 19663 4360 17903 164903;164904;164905;164906;164907;164908 131310 131310 1 GNHECASINR Unmodified 1156.5044 0.50435367 1873;1872;1381 P62140;P62136;P36873 PPP1CB;PPP1CA;PPP1CC Serine/threonine-protein phosphatase PP1-beta catalytic subunit;Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 7.1976 7.242 3 0.047918 5164 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 26.116 13.88 22188000 0 0 0 0 3786400 3353000 3158000 4816400 0 7074300 0 0 0 0 0 19664 1873;1872;1381 17904 164909;164910;164911;164912;164913 131311 131311 1 GNIDGNVSCSENLVANTAR Unmodified 1989.9174 0.91741594 3631 Q92576 PHF3 PHD finger protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 59.067 59.382 2 1.9039E-17 67584 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 123.02 116.79 23858000 0 0 0 0 0 0 0 0 5946400 0 6185300 6310400 0 5416000 0 19665 3631 17905 164914;164915;164916;164917;164918 131312;131313;131314;131315;131316 131314 5 GNIELASSEPQHFTTTVTR Unmodified 2087.0283 0.028346601 5054 Q9UPQ0 LIMCH1 LIM and calponin homology domains-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.21 2.31 1 1 17 1 1 1 2 2 2 1 1 1 2 1 1 1 2 63.221 62.865 2;3 3.1453E-65 71627 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 162.65 157.07 529840000 0 2588300 10262000 24214000 28742000 38600000 36250000 35448000 27428000 44008000 48003000 49117000 50632000 41432000 93115000 19666 5054 17906 164919;164920;164921;164922;164923;164924;164925;164926;164927;164928;164929;164930;164931;164932;164933;164934;164935;164936;164937 131317;131318;131319;131320;131321;131322;131323;131324;131325;131326;131327;131328;131329;131330;131331;131332;131333;131334;131335 131323 19 GNIFANLFK Acetyl (Protein N-term) 1064.5655 0.56548059 2011 P84077 ARF1 ADP-ribosylation factor 1 yes yes 1 0 0 By MS/MS 2.5 0.5 1 1 2 100.86 96.798 2 0.0061227 119459 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.998 47.107 7717000 0 7717000 0 0 0 0 0 0 0 0 0 0 0 0 0 19667 2011 17907 164938;164939 131336 131336 1 GNIIISTPEK Unmodified 1070.5972 0.59717465 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47.866 46.816 2 0.0023442 60274 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.94 86.232 735900000 9335700 348100000 3406200 18488000 21690000 30907000 24575000 28457000 21262000 33889000 36207000 39701000 32432000 38954000 48495000 19668 528 17908 164940;164941;164942;164943;164944;164945;164946;164947;164948;164949;164950;164951;164952;164953;164954 131337;131338;131339;131340;131341;131342;131343;131344;131345;131346;131347 131339 11 GNINNYFK Unmodified 968.47158 0.4715802 2195 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 51.35 44.489 2 0.029327 61228 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.847 61.625 43977000 32594000 11384000 0 0 0 0 0 0 0 0 0 0 0 0 0 19669 2195 17909 164955;164956 131348;131349 131348 2 GNIWSAEK Unmodified 903.44503 0.4450311 4577 Q9NQW6 ANLN Actin-binding protein anillin yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 35.11 35.225 2 0.043878 38743 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 49.097 29.25 39460000 0 0 0 4172900 3862300 0 4213500 0 0 5898900 7435700 0 0 3942200 9934600 19670 4577 17910 164957;164958;164959;164960;164961;164962;164963 131350 131350 1 GNKPWISLPR Unmodified 1166.656 0.65602693 1905 P62701 RPS4X 40S ribosomal protein S4, X isoform yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.02 63.115 3 0.0072524 72184 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 55.401 37.133 145220000 0 0 0 9559000 7102700 4151300 16299000 19078000 6051600 11712000 10206000 18980000 13941000 9667700 18475000 19671 1905 17911 164964;164965;164966;164967;164968;164969;164970;164971;164972;164973;164974;164975 131351;131352;131353;131354 131353 2 GNLANVIR Unmodified 855.49265 0.49265 963 P12236;P12235;P05141;Q9H0C2 SLC25A6;SLC25A4;SLC25A5;SLC25A31 ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed;ADP/ATP translocase 1;ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 4;ADP/ATP translocase 4, N-terminally processed yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 7 1 1 1 1 1 1 1 43.027 43.077 2 0.010759 48391 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 78.616 53.942 44855000 0 0 0 11898000 6200300 0 5353800 8345000 0 3581800 0 0 0 5285000 4191400 19672 963 17912 164976;164977;164978;164979;164980;164981;164982 131355;131356;131357 131356 3 GNLAPQGSVPSAVSSLTDDLLK Unmodified 2168.1325 0.13247732 5287 Q9Y6J9 TAF6L TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L yes yes 0 0 0 By MS/MS 2 0 1 1 97.476 92.703 3 0.016094 114777 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 24.731 20.625 16026000 0 16026000 0 0 0 0 0 0 0 0 0 0 0 0 0 19673 5287 17913 164983 131358 131358 1 GNLENSTMTAAIK Unmodified 1348.6657 0.66566492 3970 Q96RL7 VPS13A Vacuolar protein sorting-associated protein 13A yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching 10 0 5 1 1 1 1 1 50.28 50.187 2 0.00081299 57377 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 69.979 28.439 72396000 0 0 0 8051200 8964900 0 0 0 10431000 0 0 0 31097000 13852000 0 19674 3970 17914 164984;164985;164986;164987;164988 131359;131360 131360 2 GNLEWLDK Unmodified 973.4869 0.48689592 4108 Q9BRG1 VPS25 Vacuolar protein-sorting-associated protein 25 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 66.362 61.569 2 0.035657 79039 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.492 58.717 84632000 0 82052000 2580400 0 0 0 0 0 0 0 0 0 0 0 0 19675 4108 17915 164989;164990;164991 131361;131362 131361 2 GNLGAGNGNLQGPR Unmodified 1323.6644 0.66435979 1473 P43243 MATR3 Matrin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.923 31.112 2 2.402E-72 34214 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 225.87 206.08 1994100000 0 0 0 136020000 128670000 159710000 167440000 163800000 133050000 142200000 182110000 239350000 213430000 134350000 193970000 19676 1473 17916 164992;164993;164994;164995;164996;164997;164998;164999;165000;165001;165002;165003 131363;131364;131365;131366;131367;131368;131369;131370;131371;131372;131373;131374;131375;131376;131377;131378;131379;131380;131381;131382 131382 20 GNLGVYQETR Unmodified 1135.5622 0.56218613 655 O95400 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 33.436 33.502 2 0.0014192 35585 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.265 58.373 36449000 0 0 0 2723000 3069100 3148900 3586900 3182400 3092000 0 0 0 0 4990500 12656000 19677 655 17917 165004;165005;165006;165007;165008;165009;165010;165011;165012;165013 131383;131384;131385;131386;131387;131388;131389;131390 131386 8 GNLLEGPLEDSDCSK Unmodified 1632.7301 0.73011567 2859 Q68DQ2 CRYBG3 Very large A-kinase anchor protein yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 71.311 66.151 2 0.0027609 84122 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.891 40.012 25211000 0 25211000 0 0 0 0 0 0 0 0 0 0 0 0 0 19678 2859 17918 165014;165015 131391;131392;131393 131391 3 GNLLHFPSSQGEEEK Unmodified 1670.79 0.79001381 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 56 56.311 3 0.000123 62967 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.874 37.461 58081000 0 0 0 0 0 5085300 0 0 0 8400800 0 7693700 14017000 7895800 14988000 19679 2203 17919 165016;165017;165018;165019;165020;165021;165022 131394;131395;131396;131397;131398;131399 131396 6 GNLLLTGDK Unmodified 929.5182 0.51819605 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.18 3.74 3 1 7 1 2 1 1 1 1 1 1 1 1 47.231 45.164 2 0.00767 58322 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.305 76.919 198240000 11548000 137070000 6792400 4042100 3522000 10024000 0 4514800 5325000 7068500 0 0 8332000 0 0 19680 2775 17920 165023;165024;165025;165026;165027;165028;165029;165030;165031;165032;165033 131400;131401;131402;131403 131401 4 GNLMAAGQNLQSSER Unmodified 1574.7471 0.74710314 3021 Q6ZW49 PAXIP1 PAX-interacting protein 1 yes yes 0 0 0 By matching By MS/MS By matching By matching By matching By matching By MS/MS 10 0 8 1 2 1 1 1 1 1 48.015 47.976 2 0.00042467 52990 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.55 50.131 30498000 0 0 0 2668900 4536800 0 4025000 3027200 2633900 0 0 0 0 5298100 8308100 19681 3021 17921 165034;165035;165036;165037;165038;165039;165040;165041 131404;131405 131404 2 GNLMAAGQNLQSSER Oxidation (M) 1590.742 0.74201776 3021 Q6ZW49 PAXIP1 PAX-interacting protein 1 yes yes 0 1 0 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 34.549 34.532 2 0.0001898 38199 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 67.385 52.966 14440000 0 0 0 2500500 1125400 0 0 0 0 0 6298800 0 4515000 0 0 19682 3021 17921 165042;165043;165044;165045 131406 131406 4622 1 GNLQNLERK Unmodified 1070.5833 0.58325592 1122 P21283 ATP6V1C1 V-type proton ATPase subunit C 1 yes yes 0 0 1 By MS/MS By matching 2 0 2 1 1 23.602 19.63 2 0.017304 27783 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 113.26 81.32 244510000 235340000 0 9174300 0 0 0 0 0 0 0 0 0 0 0 0 19683 1122 17922 165046;165047 131407 131407 0 GNLSIHMQSDK Unmodified 1228.587 0.58702067 2594 Q15911;Q86UP3 ZFHX3;ZFHX4 Zinc finger homeobox protein 3;Zinc finger homeobox protein 4 no no 0 0 0 By MS/MS 2 0 1 1 38.796 32.234 3 0.026508 44864 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.466 50.735 11781000 11781000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19684 2594 17923 165048 131408 131408 0 GNLVDLITL Unmodified 956.55425 0.5542472 4988 Q9UL63 MKLN1 Muskelin yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 98.642 94.62 2 0.0087887 116718 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.142 67.878 17916000 0 17916000 0 0 0 0 0 0 0 0 0 0 0 0 0 19685 4988 17924 165049;165050 131409 131409 1 GNLVVQNK Unmodified 870.49232 0.49231565 5041 Q9UNS1 TIMELESS Protein timeless homolog yes yes 0 0 0 By MS/MS 10 0 1 1 16.523 16.78 2 0.035209 16703 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 52.636 18.633 2704700 0 0 0 0 0 0 0 0 0 0 0 0 2704700 0 0 19686 5041 17925 165051 131410 131410 1 GNLYSFGCPEYGQLGHNSDGK Unmodified 2298.9964 0.99639455 4806 Q9P258 RCC2 Protein RCC2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 5.4 3.77 4 2 4 2 2 2 1 1 1 1 72.875 70.233 3 7.6914E-21 79732 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 92.492 88.956 592460000 190180000 303700000 79474000 1987700 0 0 0 3384200 0 0 0 0 0 4394900 9342300 19687 4806 17926 165052;165053;165054;165055;165056;165057;165058;165059;165060;165061 131411;131412;131413;131414;131415;131416;131417;131418 131412 8 GNMMSNFFGK Unmodified 1131.4841 0.4841355 2489 Q15054 POLD3 DNA polymerase delta subunit 3 yes yes 0 0 0 By matching By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 76.169 76.224 2 0.0099821 87452 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.81 47.417 13598000 0 0 0 0 864180 2747500 0 0 0 2503900 2089600 0 0 0 5392400 19688 2489 17927 165062;165063;165064;165065;165066 131419 131419 1 GNNDILSITQPDVIYQIHK Unmodified 2167.1273 0.12733236 4049 Q99707 MTR Methionine synthase yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 88.308 84.656 3 2.4132E-13 105363 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.021 74.968 51571000 0 49993000 1578200 0 0 0 0 0 0 0 0 0 0 0 0 19689 4049 17928 165067;165068 131420 131420 1 GNNFLYTNGK Unmodified 1126.5407 0.5407224 453 O75083 WDR1 WD repeat-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.56 3.98 5 4 1 3 1 1 1 1 1 42.646 40.195 2 4.6145E-06 50807 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 146.03 125.33 280340000 27706000 214300000 2470000 0 0 0 0 0 0 0 6465900 6475100 0 4268000 18648000 19690 453 17929 165069;165070;165071;165072;165073;165074;165075;165076;165077 131421;131422;131423;131424;131425;131426;131427;131428;131429;131430;131431 131421 10 GNNLQDTLR Unmodified 1029.5203 0.52032131 1454 P42345 MTOR Serine/threonine-protein kinase mTOR yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 32.431 33.152 2 0.034875 35812 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 46.334 29.564 25077000 0 0 0 0 0 0 0 0 0 0 0 14289000 0 0 10788000 19691 1454 17930 165078;165079 131432 131432 1 GNNQADTVDFSIISVAGK Unmodified 1834.9061 0.9061062 2558 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 0 0 0 By MS/MS 10 0 1 1 83.251 83.441 2 0.0031401 96292 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.621 39.96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19692 2558 17931 165080 131433 131433 1 GNNVLYISTQK Unmodified 1235.651 0.65100113 1892 P62312 LSM6 U6 snRNA-associated Sm-like protein LSm6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 49.948 49.992 2 0.002262 55220 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.499 38.746 79010000 0 0 0 5298600 7678000 0 7336800 0 5243400 0 0 0 9775100 15895000 27783000 19693 1892 17932 165081;165082;165083;165084;165085;165086;165087 131434;131435;131436;131437;131438;131439 131435 6 GNPEIDNKK Unmodified 1013.5142 0.5141733 2794 Q5TBB1 RNASEH2B Ribonuclease H2 subunit B yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 7.1443 3.8436 2 0.0038454 5583 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 139.97 123.42 62008000 0 62008000 0 0 0 0 0 0 0 0 0 0 0 0 0 19694 2794 17933 165088;165089 131440 131440 0 GNPICSLHDQGAGGNGNVLK Unmodified 2006.9592 0.95922118 248 O15067 PFAS Phosphoribosylformylglycinamidine synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 5.3 3.85 5 1 4 2 2 2 1 1 1 1 56.499 53.153 2;3 1.451E-14 70203 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.02 91.08 508710000 216370000 141110000 123930000 0 0 0 1913100 0 0 0 5216600 0 0 4055500 16120000 19695 248 17934 165090;165091;165092;165093;165094;165095;165096;165097;165098;165099 131441;131442;131443;131444;131445;131446;131447;131448;131449 131444 8 GNPTVEVDLFTSK Unmodified 1405.7089 0.70890994 827 P06733 ENO1 Alpha-enolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 2 1 1 1 1 77.185 77.256 2 1.6806E-19 89061 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 152.64 11.859 1628200000 0 0 0 21716000 9828100 10399000 10433000 10266000 7030900 18942000 228300000 234180000 11120000 179490000 886500000 19696 827 17935 165100;165101;165102;165103;165104;165105;165106;165107;165108;165109;165110;165111;165112 131450;131451;131452;131453;131454;131455;131456;131457;131458;131459;131460;131461;131462;131463;131464 131455 15 GNPTVEVDLHTAK Unmodified 1379.7045 0.70449327 991 P13929 ENO3 Beta-enolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 42.943 43.595 3 0.0061465 47680 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 29.139 17.607 35663000 0 0 0 0 0 0 0 0 0 0 6481900 8749400 0 0 20432000 19697 991 17936 165113;165114;165115 131465 131465 1 GNRESDGFREEK Unmodified 1422.6488 0.6487693 4742 Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 7.6007 7.7691 3 0.00021655 5198 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.466 8.9778 172750000 0 0 0 0 5608700 0 8009500 8239700 12756000 12356000 42891000 21485000 21198000 17193000 23010000 19698 4742 17937 165116;165117;165118;165119;165120;165121;165122;165123;165124;165125 131466;131467;131468;131469;131470;131471;131472;131473 131468 7 GNRGMEELIPLVNK Acetyl (Protein N-term);Oxidation (M) 1626.8399 0.83994089 1630 P50570 DNM2 Dynamin-2 yes yes 1 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.69 3.47 2 2 9 3 1 1 1 1 1 1 1 1 1 1 76.48 75.291 2;3 3.9178E-15 93497 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.14 83.25 262700000 0 180470000 3293200 6567400 6287500 0 12533000 11678000 8926900 12885000 0 0 8758700 11302000 0 19699 1630 17938 165126;165127;165128;165129;165130;165131;165132;165133;165134;165135;165136;165137;165138 131474;131475;131476;131477;131478;131479;131480;131481;131482;131483;131484;131485;131486 131476 2619 12 GNRGMEELIPLVNK Acetyl (Protein N-term) 1610.845 0.84502627 1630 P50570 DNM2 Dynamin-2 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By matching 4.83 3.67 3 1 2 3 1 1 1 87.183 84.665 2;3 1.7324E-06 105197 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.86 54.425 183380000 0 167560000 2718000 0 0 0 0 0 0 3274100 0 0 0 0 9831500 19700 1630 17938 165139;165140;165141;165142;165143;165144 131487;131488;131489;131490;131491 131488 4 GNRLPAADVK Unmodified 1039.5774 0.57744226 3742 Q96AX1 VPS33A Vacuolar protein sorting-associated protein 33A yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 27.235 22.972 2 0.047061 32635 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.309 43.307 38066000 33587000 0 4478900 0 0 0 0 0 0 0 0 0 0 0 0 19701 3742 17939 165145;165146 131492 131492 0 GNSCILADEMGLGK Unmodified 1463.6748 0.6748494 199 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 78.459 73.724 2 0.037056 91935 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 63.091 50.515 37251000 0 37251000 0 0 0 0 0 0 0 0 0 0 0 0 0 19702 199 17940 165147 131493 131493 0 GNSIIMLEALER Unmodified 1344.7071 0.7071358 38 P62308;A8MWD9 SNRPG;SNRPGP15 Small nuclear ribonucleoprotein G;Putative small nuclear ribonucleoprotein G-like protein 15 yes no 0 0 0 By MS/MS 10 0 1 1 85.759 85.928 2 0.0059278 99338 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.693 34.828 5255900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5255900 19703 38 17941 165148 131494 131494 1 GNSIIMLEALERV Oxidation (M) 1459.7705 0.77046434 38 P62308;A8MWD9 SNRPG;SNRPGP15 Small nuclear ribonucleoprotein G;Putative small nuclear ribonucleoprotein G-like protein 15 yes no 0 1 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 86.473 86.519 2 0.00012233 100291 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 91.937 65.999 37646000 0 0 0 843440 2156000 1701200 1800200 2512600 0 6408700 4960300 0 0 5745500 11518000 19704 38 17942 165149;165150;165151;165152;165153;165154;165155;165156;165157;165158 131495;131496;131497;131498 131495 37 4 GNSIIMLEALERV Unmodified 1443.7755 0.77554972 38 P62308;A8MWD9 SNRPG;SNRPGP15 Small nuclear ribonucleoprotein G;Putative small nuclear ribonucleoprotein G-like protein 15 yes no 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 93.441 93.594 2 5.1002E-07 108512 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.72 95.781 7333700 0 0 0 0 0 0 0 0 0 1541700 1189900 0 0 0 4602100 19705 38 17942 165159;165160;165161 131499;131500 131500 2 GNSLQEILER Unmodified 1157.6041 0.60405094 2033 Q00341 HDLBP Vigilin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.338 72.409 2 0.00055012 83151 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 123.86 72.514 473570000 0 0 0 21532000 23638000 48557000 26202000 28965000 24476000 55096000 47239000 51699000 37121000 39853000 69190000 19706 2033 17943 165162;165163;165164;165165;165166;165167;165168;165169;165170;165171;165172;165173 131501;131502;131503;131504;131505;131506;131507;131508;131509;131510;131511;131512 131507 12 GNSPNSEPPTPK Unmodified 1223.5782 0.57823012 1546 P48634 PRRC2A Protein PRRC2A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 15.899 16.111 2 0.006179 15799 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 51.872 41.162 34921000 0 0 0 1947100 2542400 0 0 0 3507500 5466200 3962800 8235000 0 0 9260000 19707 1546 17944 165174;165175;165176;165177;165178;165179;165180;165181 131513;131514;131515;131516;131517;131518;131519 131517 7 GNSPPSSGEACR Unmodified 1217.5095 0.50949863 1435 P41227 NAA10 N-alpha-acetyltransferase 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 7.9684 8.1419 2 0.00095704 5793 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 84.17 71.133 28993000 0 0 0 0 0 0 1280400 1540400 1507300 3001100 10851000 10813000 0 0 0 19708 1435 17945 165182;165183;165184;165185;165186;165187 131520 131520 1 GNSPPSSGEACREEK Unmodified 1603.6896 0.68964784 1435 P41227 NAA10 N-alpha-acetyltransferase 10 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 8.5308 7.5831 2;3 1.8054E-24 6419 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 102.63 100.33 9175700000 24483000 163180000 0 24084000 43554000 34719000 331960000 364760000 324430000 918420000 3722000000 3173600000 9574600 14696000 26271000 19709 1435 17946 165188;165189;165190;165191;165192;165193;165194;165195;165196;165197;165198;165199;165200;165201;165202;165203;165204 131521;131522;131523;131524;131525;131526;131527;131528;131529;131530;131531;131532;131533;131534 131534 12 GNSRPGTPSAEGGSTSSTLR Unmodified 1917.914 0.91404512 1351 P35269 GTF2F1 General transcription factor IIF subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.762 22.968 3 2.3628E-61 24164 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 132.6 123.28 501130000 0 0 0 24371000 26343000 29614000 25089000 26563000 23028000 46075000 53785000 88478000 58631000 46244000 52912000 19710 1351 17947 165205;165206;165207;165208;165209;165210;165211;165212;165213;165214;165215;165216 131535;131536;131537;131538;131539;131540;131541;131542;131543;131544;131545;131546 131537 12 GNSTGTLMVFFGNVDSSGIK Oxidation (M) 2045.9728 0.97280556 726 P00451 F8 Coagulation factor VIII;Factor VIIIa heavy chain, 200 kDa isoform;Factor VIIIa heavy chain, 92 kDa isoform;Factor VIII B chain;Factor VIIIa light chain yes yes 0 1 0 By matching By MS/MS 3 0 2 1 1 88.413 85.023 2 0.0044242 101853 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 40.113 6.7043 12659000 1396300 11263000 0 0 0 0 0 0 0 0 0 0 0 0 0 19711 726 17948 165217;165218 131547 131547 875 1 GNTAAQMAQILSFNK Unmodified 1592.7981 0.79807608 1344 P35237 SERPINB6 Serpin B6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.43 3.65 5 2 14 2 4 1 1 1 1 1 2 1 2 1 2 2 84.911 83.325 2;3 5.4478E-61 104323 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 184.31 159.44 595200000 133760000 229420000 2333000 0 3647100 1230500 4116400 10435000 0 19498000 22524000 32617000 3598500 24206000 107820000 19712 1344 17949 165219;165220;165221;165222;165223;165224;165225;165226;165227;165228;165229;165230;165231;165232;165233;165234;165235;165236;165237;165238;165239 131548;131549;131550;131551;131552;131553;131554;131555;131556;131557;131558;131559;131560;131561;131562;131563;131564 131551 16 GNTAAQMAQILSFNK Oxidation (M) 1608.793 0.7929907 1344 P35237 SERPINB6 Serpin B6 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS 6 4 2 2 1 1 1 1 67.676 65.026 2 8.121E-06 82670 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.093 60.952 21142000 13080000 0 0 0 0 0 3693500 0 0 0 0 0 4369200 0 0 19713 1344 17949 165240;165241;165242;165243 131565;131566;131567 131565 2038 2 GNTAEGCVHETQEK Unmodified 1558.6682 0.66818411 4096 Q9BQG0 MYBBP1A Myb-binding protein 1A yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 9.1738 8.7577 2;3 3.3948E-18 11219 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.33 113.37 36153000 0 10591000 0 1731200 1659900 1512400 1945800 1165000 1061100 2121400 0 4483200 2908800 3516000 3456700 19714 4096 17950 165244;165245;165246;165247;165248;165249;165250;165251;165252;165253;165254;165255;165256 131568;131569;131570 131569 2 GNTEPAVELEPTTETAPSTSPSLAVPSTK Unmodified 2910.4346 0.43459216 488 O75376 NCOR1 Nuclear receptor corepressor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 77.798 77.874 3 5.2137E-07 89966 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 36.092 33.507 28462000 0 0 0 0 4925600 0 3800600 0 0 0 0 11709000 0 0 8027400 19715 488 17951 165257;165258;165259;165260 131571;131572;131573 131573 3 GNTETSASASQTNHVK Unmodified 1630.7547 0.75469094 2360 Q14004 CDK13 Cyclin-dependent kinase 13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.64 1.67 1 21 1 1 2 2 2 2 1 2 1 2 2 2 2 7.2733 7.404 2;3 1.3934E-11 5725 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 97.767 79.354 115700000 0 0 0 2140100 3704700 4369300 3935000 5920200 4747100 16554000 20689000 9810100 13390000 15987000 14449000 19716 2360 17952 165261;165262;165263;165264;165265;165266;165267;165268;165269;165270;165271;165272;165273;165274;165275;165276;165277;165278;165279;165280;165281;165282 131574;131575;131576;131577;131578;131579;131580;131581;131582 131580 9 GNTFVHDPK Unmodified 1013.493 0.49304393 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17.976 17.657 2 0.0001533 23237 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 152.11 117.29 512980000 0 203690000 93929000 10340000 13622000 14882000 13642000 11922000 10299000 20499000 18850000 27186000 28067000 18005000 28050000 19717 3676 17953 165283;165284;165285;165286;165287;165288;165289;165290;165291;165292;165293;165294;165295;165296 131583;131584;131585;131586;131587;131588;131589;131590;131591;131592;131593;131594;131595;131596;131597;131598 131592 14 GNTLLLQHLK Unmodified 1135.6713 0.67134264 3122 Q7Z7E8 UBE2Q1 Ubiquitin-conjugating enzyme E2 Q1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 54.129 54.437 2 0.0052486 60634 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.716 41.542 19270000 0 0 0 0 0 3661900 0 0 0 3116400 4451400 0 4289200 0 3751000 19718 3122 17954 165297;165298;165299;165300;165301 131599;131600;131601;131602;131603 131601 5 GNTLYVYGEDMTPTLLR Oxidation (M) 1957.9455 0.94552817 1075 P18615 NELFE Negative elongation factor E yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 81.155 81.223 2 4.2159E-36 94024 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 124.86 102.63 36013000 0 0 0 0 3122100 4103600 3092400 0 7142300 8310800 7600600 0 2641000 0 0 19719 1075 17955 165302;165303;165304;165305;165306;165307;165308;165309 131604;131605;131606;131607;131608;131609;131610 131605 1544 7 GNTLYVYGEDMTPTLLR Unmodified 1941.9506 0.95061355 1075 P18615 NELFE Negative elongation factor E yes yes 0 0 0 By MS/MS 10 0 1 1 86.938 87.096 2 1.2632E-06 100715 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.55 86.873 4577500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4577500 19720 1075 17955 165310 131611 131611 1 GNTMQQFLQK Oxidation (M) 1209.5812 0.58120701 2403 Q14320 FAM50A Protein FAM50A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 5.4 3.77 2 1 2 3 1 1 34.784 30.099 2 0.004343 39720 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.953 58.847 41673000 0 41673000 0 0 0 0 0 0 0 0 0 0 0 0 0 19721 2403 17956 165311;165312;165313;165314;165315 131612;131613;131614;131615;131616 131615 3938 4 GNTMQQFLQK Unmodified 1193.5863 0.58629239 2403 Q14320 FAM50A Protein FAM50A yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.7 3.52 2 1 7 1 2 1 1 1 1 1 1 1 58.543 56.357 2 7.4744E-06 76138 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 129.47 109.83 268230000 106080000 129950000 0 3573300 4206200 7797800 6051700 7290000 3273700 0 0 0 0 0 0 19722 2403 17956 165316;165317;165318;165319;165320;165321;165322;165323;165324;165325 131617;131618;131619;131620;131621;131622 131622 5 GNTPLHVASK Unmodified 1022.5509 0.55089316 2382 Q14161 GIT2 ARF GTPase-activating protein GIT2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 21.632 17.802 2 0.00046793 23605 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.28 75.208 178910000 108770000 52908000 17226000 0 0 0 0 0 0 0 0 0 0 0 0 19723 2382 17957 165326;165327;165328;165329 131623;131624;131625;131626;131627 131624 5 GNTSGSHIVNHLVR Unmodified 1489.775 0.77497287 3683 Q92900 UPF1 Regulator of nonsense transcripts 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 30.086 30.388 3 0.0010001 32811 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 57.136 48.086 89747000 0 0 0 0 0 10123000 4002700 3900300 4735000 11492000 9947600 6994800 16329000 9799000 12424000 19724 3683 17958 165330;165331;165332;165333;165334;165335;165336;165337;165338;165339 131628;131629;131630;131631;131632;131633 131632 6 GNVAYATSTGGIVNK Unmodified 1450.7416 0.74160705 3044 Q7L266 ASRGL1 Isoaspartyl peptidase/L-asparaginase;Isoaspartyl peptidase/L-asparaginase alpha chain;Isoaspartyl peptidase/L-asparaginase beta chain yes yes 0 0 0 By MS/MS 2 0 1 1 47.667 42.104 2 0.00012006 54694 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.452 85.216 28752000 0 28752000 0 0 0 0 0 0 0 0 0 0 0 0 0 19725 3044 17959 165340 131634 131634 1 GNVDEELSK Unmodified 989.46655 0.46655441 1437 P41236 PPP1R2 Protein phosphatase inhibitor 2 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 20.021 20.342 2 0.0030491 19813 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.783 54.623 143270000 0 0 0 9231700 0 0 0 5625300 0 9730800 31820000 25499000 0 16669000 44692000 19726 1437 17960 165341;165342;165343;165344;165345;165346;165347 131635;131636;131637;131638;131639;131640 131635 5 GNVDISAPK Unmodified 899.47125 0.47124585 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 28.613 28.865 2 0.035371 29982 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.129 23.637 196990000 0 0 0 0 17407000 21929000 0 26577000 23483000 0 32640000 33605000 0 0 41353000 19727 2172 17961 165348;165349;165350;165351;165352;165353;165354 131641 131641 1 GNVEADAFRK Unmodified 1105.5516 0.55162144 3437 Q8NEZ5 FBXO22 F-box only protein 22 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 28.095 24.199 2 0.017938 31858 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.136 64.608 71363000 0 34830000 36533000 0 0 0 0 0 0 0 0 0 0 0 0 19728 3437 17962 165355;165356;165357 131642;131643 131642 1 GNVFSSPTAAGTPNK Unmodified 1446.7103 0.71030693 2117 Q05682 CALD1 Caldesmon yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 7.18 3.74 3 1 7 1 2 1 1 1 1 1 1 1 1 44.196 42.405 2 4.3884E-23 54212 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.28 104.51 574440000 24961000 372620000 4310600 0 0 9119900 0 13239000 14119000 19284000 0 41478000 26628000 0 48686000 19729 2117 17963 165358;165359;165360;165361;165362;165363;165364;165365;165366;165367;165368 131644;131645;131646;131647;131648;131649;131650;131651 131645 7 GNVGFVFTK Unmodified 967.51272 0.51271674 808 P05388 RPLP0 60S acidic ribosomal protein P0 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.088 63.183 2 0.005264 73136 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 78.516 60.955 497740000 0 0 0 25874000 24689000 34181000 28566000 36623000 25566000 46553000 56646000 64691000 51028000 42694000 60631000 19730 808 17964 165369;165370;165371;165372;165373;165374;165375;165376;165377;165378;165379;165380 131652;131653;131654;131655;131656;131657;131658;131659;131660;131661;131662 131661 11 GNVGIGGSAVPPPPIK Unmodified 1458.8195 0.81946344 3120 Q7Z739 YTHDF3 YTH domain-containing family protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.4 2.04 1 1 23 2 1 2 2 2 2 2 2 2 2 2 2 2 68.024 67.727 2;3 1.0899E-41 77974 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 158.4 136.94 1514300000 0 154000000 0 65469000 52340000 80543000 112290000 81635000 95875000 138900000 163350000 122230000 103720000 122630000 221320000 19731 3120 17965 165381;165382;165383;165384;165385;165386;165387;165388;165389;165390;165391;165392;165393;165394;165395;165396;165397;165398;165399;165400;165401;165402;165403;165404;165405 131663;131664;131665;131666;131667;131668;131669;131670;131671;131672;131673;131674;131675;131676;131677;131678;131679;131680;131681;131682;131683;131684;131685;131686;131687;131688;131689;131690;131691;131692;131693;131694;131695;131696 131691 34 GNVGVVLFNFGK Unmodified 1249.6819 0.68190733 1330 P33316 DUT Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial yes yes 0 0 0 By MS/MS 10 0 1 1 86.558 86.717 2 0.035975 100179 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.06 44.276 8462400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8462400 19732 1330 17966 165406 131697;131698 131697 2 GNVLVLSQHK Unmodified 1093.6244 0.62439245 2425 Q14671 PUM1 Pumilio homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.484 35.666 2 0.014646 38396 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 96.311 79.198 378050000 0 0 0 12454000 14921000 23053000 22309000 35616000 23341000 29071000 30770000 53528000 52495000 25961000 54529000 19733 2425 17967 165407;165408;165409;165410;165411;165412;165413;165414;165415;165416;165417;165418 131699;131700;131701;131702;131703;131704;131705;131706;131707 131707 3 GNVQVVIPFLTESYSSSQDPPEK Unmodified 2520.2384 0.23839896 1137 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.4 3.77 4 2 4 1 4 1 1 1 1 1 94.327 92.318 2;3 2.2764E-149 110396 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 158 156.36 681020000 0 633930000 4521400 0 0 0 0 0 0 11883000 5815900 0 0 3472800 21402000 19734 1137 17968 165419;165420;165421;165422;165423;165424;165425;165426;165427;165428 131708;131709;131710;131711;131712;131713;131714;131715;131716;131717;131718;131719;131720 131714 13 GNVVPSPLPTRR Unmodified 1291.7361 0.73606817 5120 Q9Y2V2 CARHSP1 Calcium-regulated heat stable protein 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 44.558 45.107 3 0.001992 49306 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.841 41.515 29192000 0 0 0 0 0 0 0 0 0 0 6455400 6289400 0 6618200 9829000 19735 5120 17969 165429;165430;165431;165432 131721 131721 1 GNWDEQFDK Unmodified 1137.4727 0.47270242 1344 P35237 SERPINB6 Serpin B6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 44.592 45.141 2 0.0052437 49618 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 91.783 91.783 68555000 0 0 0 0 0 0 0 0 0 0 14630000 8690900 0 8406300 36829000 19736 1344 17970 165433;165434;165435;165436 131722;131723;131724;131725;131726 131725 5 GNWEQPQNQNQTQHK Unmodified 1835.8299 0.82992156 2380 Q14157 UBAP2L Ubiquitin-associated protein 2-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 16.896 17.075 2;3 6.9857E-27 17026 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 100.11 97.872 602690000 0 0 0 27348000 27004000 38425000 35585000 36112000 45741000 38802000 74895000 99805000 46255000 45635000 87081000 19737 2380 17971 165437;165438;165439;165440;165441;165442;165443;165444;165445;165446;165447;165448;165449;165450;165451;165452;165453;165454;165455;165456;165457;165458;165459;165460 131727;131728;131729;131730;131731;131732;131733;131734;131735;131736;131737;131738;131739;131740;131741;131742;131743;131744 131736 16 GNYHYLVK Unmodified 992.50797 0.50796571 2201 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 29.345 28.688 2 0.013011 29204 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.324 57.03 103110000 33148000 0 7789800 0 3649300 5393100 5036300 4070000 5267000 6828200 8169000 0 8106900 7987800 7663900 19738 2201 17972 165461;165462;165463;165464;165465;165466;165467;165468;165469;165470;165471;165472 131745;131746;131747;131748;131749 131745 4 GNYILSAGVDK Unmodified 1135.5873 0.58733824 443 O60907 TBL1X F-box-like/WD repeat-containing protein TBL1X yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.86 3.4 1 1 5 2 1 1 1 1 1 54.474 52.844 2 0.0015064 58763 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 72.275 52.76 102210000 0 71428000 0 3871000 5814100 0 6001700 6517000 0 0 0 0 0 8575900 0 19739 443 17973 165473;165474;165475;165476;165477;165478;165479 131750;131751;131752;131753;131754;131755 131754 6 GPAAAQGSAAAPAEPK Unmodified 1392.6997 0.69974224 4899 Q9UHD9 UBQLN2 Ubiquilin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.402 22.606 2 2.5749E-71 23776 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 182.25 164.81 471780000 0 0 0 26828000 20391000 23032000 28846000 34292000 22635000 42472000 57907000 60398000 48388000 49148000 57440000 19740 4899 17974 165480;165481;165482;165483;165484;165485;165486;165487;165488;165489;165490;165491 131756;131757;131758;131759;131760;131761;131762;131763;131764;131765;131766;131767;131768;131769 131756 14 GPAAIEECCNWFHK Unmodified 1717.7341 0.73409561 1355 P35573 AGL Glycogen debranching enzyme;4-alpha-glucanotransferase;Amylo-alpha-1,6-glucosidase yes yes 0 0 0 By MS/MS 2 0 1 1 75.262 67.131 3 0.0011953 88669 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.602 52.658 11708000 11708000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19741 1355 17975 165492 131770 131770 1 GPAAPPPTPVKPPR Unmodified 1380.7878 0.78776939 3715 Q969G5 PRKCDBP Protein kinase C delta-binding protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 2 1 1 1 2 1 1 1 39.453 39.672 3 0.0068012 44234 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 31.693 24.789 190970000 0 0 0 9361600 11532000 14321000 13422000 20544000 15016000 17795000 13461000 26826000 15695000 11939000 21056000 19742 3715 17976 165493;165494;165495;165496;165497;165498;165499;165500;165501;165502;165503;165504;165505;165506 131771;131772;131773;131774 131771 2 GPADSLSTAAGAAELSAEGAGK Unmodified 1929.928 0.92796385 3108 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 1 1 1 2 2 2 2 2 1 2 2 72.793 72.912 2;3 0 84026 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 242.19 230.13 338030000 0 0 0 12197000 18984000 17123000 13136000 26879000 24876000 38956000 41548000 39947000 16936000 24156000 63287000 19743 3108 17977 165507;165508;165509;165510;165511;165512;165513;165514;165515;165516;165517;165518;165519;165520;165521;165522;165523;165524;165525 131775;131776;131777;131778;131779;131780;131781;131782;131783;131784;131785;131786;131787;131788;131789;131790;131791 131789 15 GPAEDMSSK Unmodified 920.39095 0.39094662 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 8.6265 8.4949 2 0.008713 9369 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.355 76.307 76469000 0 43210000 0 2274000 2268800 2961800 2748400 2449300 2366400 1833200 5704400 3065100 2869000 1837000 2882000 19744 2361 17978 165526;165527;165528;165529;165530;165531;165532;165533;165534;165535;165536;165537;165538 131792;131793;131794;131795;131796 131794 5 GPAEESSSWR Unmodified 1104.4836 0.48360145 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 23.873 24.372 2 0.019804 24869 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.603 22.68 5884800 0 0 0 0 0 0 0 0 0 0 0 0 0 1943900 3941000 19745 2378 17979 165539;165540 131797 131797 1 GPAEVDTVDAFQGR Unmodified 1460.6896 0.68957148 3078 Q7Z333 SETX Probable helicase senataxin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 57.987 58.342 2 0.00069093 66320 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 77.64 64.603 9620000 0 0 0 0 0 0 4572000 0 0 0 0 0 0 0 5048000 19746 3078 17980 165541;165542;165543;165544 131798;131799;131800 131799 3 GPAFNMASPESDFGINLK Oxidation (M) 1909.888 0.88801329 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 81.221 81.026 2 2.528E-184 93821 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 218.06 210.1 232240000 0 10281000 0 5474800 12769000 15638000 12702000 24713000 16313000 16809000 19073000 25371000 22481000 17473000 33144000 19747 2172 17981 165545;165546;165547;165548;165549;165550;165551;165552;165553;165554;165555;165556;165557 131801;131802;131803;131804;131805;131806;131807;131808;131809;131810;131811;131812;131813;131814;131815;131816;131817;131818;131819;131820;131821 131804 3507 21 GPAFNMASPESDFGINLK Unmodified 1893.8931 0.89309867 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS 6.5 3.5 1 1 1 1 88.213 86.687 2 1.5007E-15 100487 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 128.85 112.71 10854000 0 4506300 0 0 0 0 0 0 0 0 0 0 0 0 6347300 19748 2172 17981 165558;165559 131822;131823 131822 2 GPAGGPVLPQLK Unmodified 1132.6604 0.66044361 2340 Q13671 RIN1 Ras and Rab interactor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.15 65.238 2 2.112E-05 74597 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 103.83 74.683 84092000 0 0 0 5371800 6305100 5629500 6631600 6165000 5914800 7338000 7450600 9867100 8314100 7021100 8082800 19749 2340 17982 165560;165561;165562;165563;165564;165565;165566;165567;165568;165569;165570;165571 131824;131825;131826;131827;131828;131829;131830;131831;131832;131833;131834 131829 11 GPAGNWGPPGDYPDR Unmodified 1554.6852 0.68515481 1546 P48634 PRRC2A Protein PRRC2A yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 58.027 58.479 2 9.0687E-05 65749 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 79.659 72.013 13130000 0 0 0 0 0 0 0 0 0 0 0 3680800 2886500 0 6562900 19750 1546 17983 165572;165573;165574;165575;165576 131835;131836;131837 131837 3 GPAGPAAQQAAK Unmodified 1065.5567 0.55670682 284 O15417 TNRC18 Trinucleotide repeat-containing gene 18 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 10.104 10.242 2 0.0043146 7939 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 57.96 34.437 16071000 0 0 0 994580 879360 1181600 1427800 983840 905340 1480300 1650100 1808400 1694900 1630700 1433800 19751 284 17984 165577;165578;165579;165580;165581;165582;165583;165584;165585;165586;165587;165588 131838;131839;131840;131841;131842;131843;131844 131841 6 GPAGPALGR Unmodified 794.43989 0.43988615 2039 Q00587 CDC42EP1 Cdc42 effector protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.999 22.207 2 0.0034047 23534 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 105.39 50.865 402290000 0 0 0 21378000 22682000 25944000 35872000 20891000 28013000 42874000 42463000 52018000 34701000 34832000 40625000 19752 2039 17985 165589;165590;165591;165592;165593;165594;165595;165596;165597;165598;165599;165600 131845;131846;131847;131848;131849;131850;131851;131852;131853;131854;131855 131855 9 GPALANGFPSAHEALK Unmodified 1578.8154 0.8154407 3186 Q86WR7 PROSER2 Proline and serine-rich protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.582 60.687 3 3.5458E-06 69350 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 80.102 69.98 165030000 0 0 0 9758000 10737000 13425000 16091000 12399000 9103200 14858000 17032000 19510000 15061000 3229500 23825000 19753 3186 17986 165601;165602;165603;165604;165605;165606;165607;165608;165609;165610;165611;165612 131856;131857;131858;131859;131860;131861;131862;131863;131864;131865;131866 131863 11 GPAPELQGVEVALAPEELELDPMAMTQK 2 Oxidation (M) 2994.4566 0.45658993 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.12 3.72 2 1 5 2 1 1 1 1 1 1 93.865 92.636 3 1.3142E-25 108026 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 73.072 66.119 384170000 0 294340000 4602200 0 0 0 1978000 0 0 29790000 22629000 8475100 0 0 22361000 19754 2290 17987 165613;165614;165615;165616;165617;165618;165619;165620 131867;131868;131869;131870;131871;131872;131873;131874;131875 131874 3735;3736 9 GPAPELQGVEVALAPEELELDPMAMTQK Oxidation (M) 2978.4617 0.46167531 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 1 0 By MS/MS 2.5 0.5 2 2 4 97.513 93.484 3 4.3906E-34 112129 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 94.192 87.239 565710000 0 565710000 0 0 0 0 0 0 0 0 0 0 0 0 0 19755 2290 17987 165621;165622;165623;165624 131876;131877;131878;131879 131877 3735;3736 4 GPAPELQGVEVALAPEELELDPMAMTQK Unmodified 2962.4668 0.46676069 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 1 3 98.88 93.653 2;3 1.3149E-246 116828 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 294.65 282.92 635030000 34268000 600760000 0 0 0 0 0 0 0 0 0 0 0 0 0 19756 2290 17987 165625;165626;165627;165628 131880;131881;131882;131883;131884 131882 5 GPAPQDQAGPGGAPR Unmodified 1374.664 0.66402543 711 O96005 CLPTM1 Cleft lip and palate transmembrane protein 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 21.038 21.374 2 0.0030448 21848 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 58.37 44.916 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19757 711 17988 165629;165630 131885;131886 131886 2 GPAPRETK Unmodified 854.46102 0.46101552 258 O15145 ARPC3 Actin-related protein 2/3 complex subunit 3 yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 1 2 4.6823 1.3947 2 0.037972 2160 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.9 74.429 145760000 118750000 27014000 0 0 0 0 0 0 0 0 0 0 0 0 0 19758 258 17989 165631;165632;165633 131887;131888 131887 1 GPARDPGGGAGAITVASHSK Unmodified 1804.918 0.91800829 3007 Q6ZRV2 FAM83H Protein FAM83H yes yes 0 0 1 By MS/MS 10 0 1 1 28.687 28.407 3 0.025125 30921 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 37.4 27.342 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19759 3007 17990 165634 131889 131889 1 GPASDSETEDASRHK Unmodified 1585.6968 0.69684171 3993 Q96ST2 IWS1 Protein IWS1 homolog yes yes 0 0 1 By MS/MS 2 0 1 1 6.408 4.1905 3 0.0013812 5975 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 60.55 53.18 6513900 0 0 6513900 0 0 0 0 0 0 0 0 0 0 0 0 19760 3993 17991 165635 131890 131890 1 GPASTPTYSPAPTQPAPR Unmodified 1794.8901 0.89006221 2921 Q6P1N0 CC2D1A Coiled-coil and C2 domain-containing protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 44.091 44.524 2 1.6302E-37 48827 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 128.68 103.2 66637000 0 0 0 0 0 9446700 0 0 0 8257100 13908000 17823000 0 0 17203000 19761 2921 17992 165636;165637;165638;165639;165640;165641;165642;165643 131891;131892;131893;131894;131895;131896;131897;131898;131899;131900 131894 10 GPASVPSVGK Unmodified 897.49198 0.4919813 2289 Q13428 TCOF1 Treacle protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 28.895 28.839 2 0.0019575 31073 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 99.136 67.846 194220000 0 0 0 26083000 37432000 49642000 34381000 20811000 25865000 0 0 0 0 0 0 19762 2289 17993 165644;165645;165646;165647;165648;165649 131901;131902;131903;131904;131905;131906;131907 131904 7 GPATAEVPYPDDLVGFK Unmodified 1774.8778 0.87776618 2540 Q15477 SKIV2L Helicase SKI2W yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 83.592 83.485 2 0.00019714 96712 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 68.069 59.556 4094800 0 0 0 0 1710000 2384800 0 0 0 0 0 0 0 0 0 19763 2540 17994 165650;165651 131908 131908 1 GPATVDLELDALEGK Unmodified 1526.7828 0.78280317 3801 Q96DT7 ZBTB10 Zinc finger and BTB domain-containing protein 10 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 82.922 83.067 2 0.0012437 95318 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 75.819 62.619 6379700 0 0 0 0 0 0 0 0 2478300 0 0 0 0 3901400 0 19764 3801 17995 165652;165653;165654;165655 131909;131910;131911 131910 3 GPAVGIDLGTTYSCVGVFQHGK Unmodified 2262.1103 0.11030209 934 P11142 HSPA8 Heat shock cognate 71 kDa protein yes yes 0 0 0 By MS/MS By MS/MS 2.29 0.452 5 2 5 2 86.923 80.912 2;3 6.9428E-12 103259 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 122.97 115.18 261470000 221350000 40115000 0 0 0 0 0 0 0 0 0 0 0 0 0 19765 934 17996 165656;165657;165658;165659;165660;165661;165662 131912;131913;131914;131915;131916;131917;131918 131915 5 GPAWVGSHGVLQHTQGLPADR Unmodified 2182.1032 0.1031833 2563 Q15654 TRIP6 Thyroid receptor-interacting protein 6 yes yes 0 0 0 By MS/MS 10 0 1 1 61.592 62.172 3 0.011252 70281 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 25.474 20.473 5540400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5540400 19766 2563 17997 165663 131919 131919 1 GPAYGLSR Unmodified 819.4239 0.42390173 1391 P37802 TAGLN2 Transgelin-2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.531 26.731 2 0.010501 28816 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 79.451 44.346 484110000 0 0 0 26521000 20502000 44163000 33224000 27053000 22448000 40247000 59786000 58028000 27426000 44094000 80622000 19767 1391 17998 165664;165665;165666;165667;165668;165669;165670;165671;165672;165673;165674;165675 131920;131921;131922;131923;131924;131925 131920 3 GPCIIYNEDNGIIK Unmodified 1604.7868 0.78684269 1377 P36578 RPL4 60S ribosomal protein L4 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 71.97 72.009 2 0.0014729 82799 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 80.24 69.139 13466000 0 0 0 0 1771600 0 0 0 0 0 0 4804000 3140000 3750100 0 19768 1377 17999 165676;165677;165678;165679 131926;131927;131928 131928 3 GPCQESFYNLGR Unmodified 1426.6299 0.62994811 5245 Q9Y5Q9 GTF3C3 General transcription factor 3C polypeptide 3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 60.467 60.263 2 0.0042232 67947 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 58.246 52.285 12065000 0 0 0 2341800 2541100 0 0 0 0 0 0 0 4095500 3087100 0 19769 5245 18000 165680;165681;165682;165683 131929;131930 131929 2 GPCVSENEIGTGGTCQWK Unmodified 1978.8513 0.85131021 2536 Q15436 SEC23A Protein transport protein Sec23A yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 60.694 55.355 2 1.0104E-46 71058 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 171.73 149.5 36577000 0 36577000 0 0 0 0 0 0 0 0 0 0 0 0 0 19770 2536 18001 165684;165685 131931;131932 131931 2 GPCWLEVK Unmodified 987.48479 0.48478743 895 P09884 POLA1 DNA polymerase alpha catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 71.401 65.519 2 0.031208 83714 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.243 56.438 59975000 12931000 38989000 8054400 0 0 0 0 0 0 0 0 0 0 0 0 19771 895 18002 165686;165687;165688 131933;131934 131933 1 GPDETLR Unmodified 786.38718 0.38718187 1135 P22234 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 8.83 2.61 1 5 1 1 1 1 1 1 14.296 13.846 2 0.031783 15369 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 88.029 13.614 187890000 0 10142000 0 0 17351000 0 0 0 2588200 40876000 0 69125000 0 47803000 0 19772 1135 18003 165689;165690;165691;165692;165693;165694 131935;131936;131937;131938 131936 3 GPDETLRIK Unmodified 1027.5662 0.56620887 1135 P22234 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0.632 1 3 1 2 2 1 51.27 48.444 2 1.4451E-125 44683 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 261.71 208.03 1588800000 348990000 476880000 762960000 0 0 0 0 0 0 0 0 0 0 0 0 19773 1135 18004 165695;165696;165697;165698;165699 131939;131940;131941;131942;131943;131944;131945;131946;131947;131948;131949 131946 10 GPDFTPAFADFGR Unmodified 1396.6412 0.64116473 329 O43432 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 83.861 83.953 2 0.002909 97096 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 56.359 36.056 78520000 0 0 0 3269700 0 5778200 5379400 7172700 8256300 7861800 7151100 8802000 4521900 7337100 12990000 19774 329 18005 165700;165701;165702;165703;165704;165705;165706;165707;165708;165709;165710 131950;131951;131952;131953;131954;131955;131956;131957;131958 131955 9 GPDGLTAFEATDNQAIK Unmodified 1746.8424 0.84244331 1803 P58546 MTPN Myotrophin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.42 3.65 8 3 22 1 8 2 2 2 2 2 1 2 1 2 2 2 2 2 73.263 71.973 2;3 1.0584E-275 89590 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 317.81 304.15 5656700000 75362000 4885500000 37238000 18260000 21570000 29459000 30737000 45344000 15889000 37743000 86766000 101940000 24214000 73121000 173570000 19775 1803 18006 165711;165712;165713;165714;165715;165716;165717;165718;165719;165720;165721;165722;165723;165724;165725;165726;165727;165728;165729;165730;165731;165732;165733;165734;165735;165736;165737;165738;165739;165740;165741;165742;165743 131959;131960;131961;131962;131963;131964;131965;131966;131967;131968;131969;131970;131971;131972;131973;131974;131975;131976;131977;131978;131979;131980;131981 131963 19 GPDGMALPRPR Unmodified 1165.6026 0.60261115 2444 Q14764 MVP Major vault protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 42.791 42.926 3 0.007522 48217 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 42.802 31.439 51383000 0 0 0 6546600 2463000 0 0 0 0 5680700 7843600 0 8356900 7899200 12593000 19776 2444 18007 165744;165745;165746;165747;165748;165749;165750 131982;131983;131984;131985 131985 3 GPDNSMGFGAERK Unmodified 1364.6143 0.61429805 517 O75534 CSDE1 Cold shock domain-containing protein E1 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 27.588 27.826 3 0.0002745 29377 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.196 57.546 143460000 0 0 0 0 8373100 9831300 9759700 8705500 4557900 12360000 16421000 17813000 6810900 13203000 35624000 19777 517 18008 165751;165752;165753;165754;165755;165756;165757;165758;165759;165760;165761 131986;131987;131988;131989;131990;131991;131992;131993;131994;131995;131996 131996 10 GPDNSMGFGAERK Oxidation (M) 1380.6092 0.60921267 517 O75534 CSDE1 Cold shock domain-containing protein E1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 14.98 15.121 3 0.00014653 14324 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 76.357 71.298 94899000 0 0 0 6251100 5416700 0 11451000 7421900 7015600 11422000 18466000 0 0 0 27455000 19778 517 18008 165762;165763;165764;165765;165766;165767;165768;165769 131997;131998 131998 678 2 GPDTLCFDK Unmodified 1051.4644 0.46444592 2443 Q14746 COG2 Conserved oligomeric Golgi complex subunit 2 yes yes 0 0 0 By MS/MS 2 0 1 1 50.048 44.341 2 0.0089039 57622 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.819 70.036 40477000 0 40477000 0 0 0 0 0 0 0 0 0 0 0 0 0 19779 2443 18009 165770 131999 131999 1 GPEADSEWR Unmodified 1045.4465 0.44648767 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.677 26.878 2 0.0053645 28501 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 77.923 70.251 87652000 0 0 0 4510500 3367100 7559000 4698400 5944400 5252300 6332100 9354700 11073000 8016800 7331600 14211000 19780 2378 18010 165771;165772;165773;165774;165775;165776;165777;165778;165779;165780;165781;165782 132000;132001;132002;132003;132004;132005;132006;132007;132008;132009;132010;132011 132005 12 GPEDSGAGGTGCGGADDPAK Unmodified 1774.7064 0.70642011 1973 P78337 PITX1 Pituitary homeobox 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.781 16.96 2 8.2784E-87 16514 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 167.32 164.81 104460000 0 0 0 3525900 6312200 8287900 14627000 6736400 6923700 5941700 9667500 10118000 11161000 8159900 13004000 19781 1973 18011 165783;165784;165785;165786;165787;165788;165789;165790;165791;165792;165793;165794 132012;132013;132014;132015;132016;132017;132018;132019;132020;132021;132022;132023 132021 12 GPEDTAQLAHAVLAK Unmodified 1519.7995 0.79945628 2587 Q15833 STXBP2 Syntaxin-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.93 3.43 3 1 11 3 1 1 1 1 1 1 1 1 1 1 1 1 68.787 67.632 2;3 4.3906E-11 87134 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.15 104.37 338570000 0 225660000 50602000 3768100 2208500 8952000 2603300 4202900 0 6511300 5106300 5499000 5160000 4545400 13752000 19782 2587 18012 165795;165796;165797;165798;165799;165800;165801;165802;165803;165804;165805;165806;165807;165808;165809 132024;132025;132026;132027;132028;132029;132030;132031;132032 132026 7 GPEEINEELMK Oxidation (M) 1303.5966 0.5965823 1522 P47712 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.83 3.5 4 1 13 1 2 2 1 1 1 1 1 1 1 1 1 1 2 1 44.167 42.863 2 1.563E-16 56801 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 167.12 154.84 1078500000 20762000 575290000 25838000 21289000 21466000 32229000 28947000 23519000 29914000 31011000 33096000 53833000 45039000 90208000 46050000 19783 1522 18013 165810;165811;165812;165813;165814;165815;165816;165817;165818;165819;165820;165821;165822;165823;165824;165825;165826;165827 132033;132034;132035;132036;132037;132038;132039;132040;132041;132042;132043;132044;132045;132046;132047;132048;132049;132050 132042 2418 18 GPEEINEELMK Unmodified 1287.6017 0.60166768 1522 P47712 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 56.802 56.147 2 9.6832E-07 70958 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.38 129.38 1275300000 0 932620000 0 13944000 18319000 25744000 18402000 22942000 13963000 38891000 33287000 35725000 29296000 28188000 63962000 19784 1522 18013 165828;165829;165830;165831;165832;165833;165834;165835;165836;165837;165838;165839;165840;165841 132051;132052;132053;132054;132055;132056;132057;132058;132059;132060;132061;132062;132063;132064;132065;132066;132067 132054 17 GPEEPERPVRR Unmodified 1320.6898 0.68984626 4955 Q9UK61 FAM208A Protein FAM208A yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 10.753 10.85 3 0.011594 8832 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.067 46.943 25013000 0 0 0 1956900 1511900 2311600 2836800 1836700 1694800 2705000 0 0 3100400 2664000 4394600 19785 4955 18014 165842;165843;165844;165845;165846;165847;165848;165849;165850;165851 132068 132068 1 GPEFQEFLLTK Unmodified 1307.6762 0.67615325 1523 P47736 RAP1GAP Rap1 GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 83.672 83.825 2 0.00051485 97149 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 82.749 61.879 25358000 0 0 0 0 0 0 0 4079200 4170600 5096500 4467300 4988800 0 2555700 0 19786 1523 18015 165852;165853;165854;165855;165856;165857 132069;132070;132071;132072;132073 132069 4 GPEGQSQAPASTSASTR Unmodified 1630.7547 0.75469094 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.317 14.479 2 2.2811E-70 13544 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 220.53 175.39 114110000 0 0 0 5458800 5057300 9517600 4808000 6935400 5196100 9332000 14260000 15179000 11039000 10171000 17151000 19787 2193 18016 165858;165859;165860;165861;165862;165863;165864;165865;165866;165867;165868;165869 132074;132075;132076;132077;132078;132079;132080;132081;132082;132083;132084;132085;132086 132080 13 GPEIDIK Unmodified 770.41742 0.41741937 2172;3226 Q8IVF2;Q09666 AHNAK2;AHNAK Protein AHNAK2;Neuroblast differentiation-associated protein AHNAK no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 36.227 36.467 2 0.023353 40389 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 91.626 24.592 277480000 0 0 0 0 17373000 19309000 21560000 23504000 19247000 20903000 17134000 36921000 32660000 28313000 40559000 19788 3226;2172 18017 165870;165871;165872;165873;165874;165875;165876;165877;165878;165879;165880 132087;132088;132089;132090;132091;132092;132093;132094 132091 8 GPEIRTGLIK Unmodified 1082.6448 0.64479354 1000 P14618 PKM Pyruvate kinase PKM yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 51.135 45.477 2 6.345E-05 63016 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 132.01 75.752 1761300000 1605200000 124920000 31228000 0 0 0 0 0 0 0 0 0 0 0 0 19789 1000 18018 165881;165882;165883;165884 132095;132096;132097;132098;132099 132099 3 GPELPLVPVK Unmodified 1047.6328 0.63283187 3798 Q96DI7 SNRNP40 U5 small nuclear ribonucleoprotein 40 kDa protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 77.81 77.288 2 0.0026685 89125 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 81.296 71.309 289160000 0 93433000 0 6685600 6878200 13332000 10039000 10444000 11028000 16261000 21001000 21512000 15305000 22394000 40850000 19790 3798 18019 165885;165886;165887;165888;165889;165890;165891;165892;165893;165894;165895;165896;165897;165898 132100;132101;132102;132103;132104;132105;132106;132107;132108;132109;132110;132111;132112;132113 132107 14 GPELWESK Unmodified 944.46035 0.46034682 2183 Q12768 KIAA0196 WASH complex subunit strumpellin yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 49.223 43.926 2 0.0215 56769 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.568 68.721 56413000 0 56413000 0 0 0 0 0 0 0 0 0 0 0 0 0 19791 2183 18020 165899;165900 132114 132114 1 GPENLHYDQGCQTSRTK Unmodified 1989.8963 0.89628657 4862 Q9UBW7 ZMYM2 Zinc finger MYM-type protein 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 26.11 21.935 3 0.0066418 31029 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.314 38.28 10695000 7063600 0 3631600 0 0 0 0 0 0 0 0 0 0 0 0 19792 4862 18021 165901;165902 132115;132116 132115 2 GPEQTADDADDAAGHK Unmodified 1596.6652 0.66520723 3304 Q8N122 RPTOR Regulatory-associated protein of mTOR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.24 2 1 10 1 2 1 1 1 1 1 1 1 1 1 1 15.217 14.425 3 1.0389E-10 14213 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 76.85 75.484 151010000 13967000 72596000 0 0 5089700 7056200 3481600 0 0 10782000 6776000 8985400 4756100 7852400 9664400 19793 3304 18022 165903;165904;165905;165906;165907;165908;165909;165910;165911;165912;165913;165914;165915 132117;132118;132119;132120;132121;132122;132123;132124;132125;132126;132127;132128;132129;132130 132117 13 GPESESEDHRASGEVR Unmodified 1740.7663 0.76631825 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.17 2.44 3 26 1 2 2 2 2 2 2 2 2 1 3 3 3 2 9.0702 8.8977 3;4 2.6418E-71 7825 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 180.97 180.97 1186200000 9482100 0 45138000 91493000 79100000 78089000 81633000 37837000 43085000 65052000 156700000 167760000 79999000 93838000 157030000 19794 1986 18023 165916;165917;165918;165919;165920;165921;165922;165923;165924;165925;165926;165927;165928;165929;165930;165931;165932;165933;165934;165935;165936;165937;165938;165939;165940;165941;165942;165943;165944 132131;132132;132133;132134;132135;132136;132137;132138;132139;132140;132141;132142;132143;132144;132145;132146;132147;132148;132149;132150;132151;132152;132153;132154;132155;132156;132157;132158;132159;132160 132137 21 GPESESEDHRASGEVRTGK Unmodified 2026.9304 0.93042347 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 2 By MS/MS By MS/MS By MS/MS 2 0.5 1 6 1 4 1 3 24.462 22.369 3;4;5 1.4164E-12 11734 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 103.13 99.47 877760000 467120000 16558000 394090000 0 0 0 0 0 0 0 0 0 0 0 0 19795 1986 18024 165945;165946;165947;165948;165949;165950;165951;165952 132161;132162;132163;132164;132165;132166;132167;132168;132169 132165 5 GPETVGSEVEALNLQVTSLFK Unmodified 2217.1529 0.15287841 3785 Q96CV9 OPTN Optineurin yes yes 0 0 0 By MS/MS 2 0 1 1 100.33 95.612 3 0.0016684 118209 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 24.679 16.59 6296200 0 6296200 0 0 0 0 0 0 0 0 0 0 0 0 0 19796 3785 18025 165953 132170 132170 1 GPEVDIEGPEGK Unmodified 1225.5826 0.5826468 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 44.261 43.562 2 2.4764E-06 49539 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 113.1 76.539 371080000 0 68627000 0 16428000 18860000 19261000 20114000 23884000 25537000 30385000 26080000 0 39474000 32658000 49775000 19797 2172 18026 165954;165955;165956;165957;165958;165959;165960;165961;165962;165963;165964;165965;165966;165967 132171;132172;132173;132174;132175;132176;132177;132178;132179;132180;132181;132182;132183;132184;132185;132186 132185 16 GPEVDIRDPK Unmodified 1124.5826 0.58258722 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 30.892 31.222 2 0.022719 33996 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 113.62 90.841 66205000 0 0 0 0 0 0 0 14103000 12103000 0 0 0 16531000 12187000 11282000 19798 2172 18027 165968;165969;165970;165971;165972 132187 132187 0 GPEVDIRDPKVDIDVPDVDVQGPDWHLK Unmodified 3152.5778 0.57784277 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 2 By MS/MS 2 0 1 1 90.263 82.132 5 7.8534E-05 106678 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 37.054 31.151 10270000 10270000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19799 2172 18028 165973 132188 132188 1 GPEVDLKGPR Unmodified 1066.5771 0.57710791 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 31.286 31.204 2 0.0027653 40025 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 117.4 44.151 98899000 0 0 17180000 0 0 22433000 0 0 0 6321600 10178000 13768000 4165600 7527300 17326000 19800 2172 18029 165974;165975;165976;165977;165978;165979;165980;165981 132189;132190 132190 1 GPEVDVSGPK Unmodified 983.49238 0.49237523 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.53 2.94 1 2 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 29.795 29.009 2 0.0017096 31488 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 94.85 71.807 494010000 167370 51031000 0 21547000 18134000 29441000 34209000 40605000 27129000 33025000 38060000 36039000 55254000 44874000 64493000 19801 2172 18030 165982;165983;165984;165985;165986;165987;165988;165989;165990;165991;165992;165993;165994;165995;165996 132191;132192;132193;132194;132195;132196;132197;132198;132199;132200;132201;132202;132203;132204;132205;132206;132207;132208;132209 132200 19 GPEVREYREK Unmodified 1261.6415 0.64149908 1312 P31947 SFN 14-3-3 protein sigma yes yes 0 0 2 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 14.725 11.48 3 0.041761 16572 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.276 34.521 1329100000 1279300000 29334000 20473000 0 0 0 0 0 0 0 0 0 0 0 0 19802 1312 18031 165997;165998;165999 132210 132210 0 GPFADENFK Unmodified 1023.4662 0.46616048 331 O43447 PPIH Peptidyl-prolyl cis-trans isomerase H yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.661 46.827 2 0.0043294 51706 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 87.181 76.353 104580000 0 0 0 4754700 5286500 7654000 7831400 6696200 4897700 8323400 10444000 12479000 10310000 9646600 16258000 19803 331 18032 166000;166001;166002;166003;166004;166005;166006;166007;166008;166009;166010;166011 132211;132212;132213;132214;132215;132216;132217;132218;132219;132220 132219 10 GPFATFK Unmodified 766.40138 0.40137537 2984 Q6UXN9 WDR82 WD repeat-containing protein 82 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 49.152 48.13 2 0.022748 53018 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 104.11 104.11 567840000 159890000 17932000 0 18798000 24309000 0 34432000 40257000 0 45443000 36992000 43286000 37961000 40625000 67923000 19804 2984 18033 166012;166013;166014;166015;166016;166017;166018;166019;166020;166021;166022;166023 132221;132222;132223;132224;132225;132226;132227;132228;132229;132230 132229 10 GPFGREELLR Unmodified 1172.6302 0.63020611 3693 Q92974 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 53.456 53.459 3 0.0058469 62026 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 59.426 46.47 197730000 0 0 0 12501000 9944600 0 15210000 8986100 0 0 0 0 55730000 0 95360000 19805 3693 18034 166024;166025;166026;166027;166028;166029 132231;132232;132233;132234 132234 4 GPFLLGIK Unmodified 843.52182 0.52182486 1126 P21399 ACO1 Cytoplasmic aconitate hydratase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.09 3.85 4 7 2 1 1 1 1 1 1 1 1 1 80.335 78.973 2 0.0065503 91126 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 99.919 70.609 178970000 79723000 12638000 17834000 1981400 0 3082000 0 0 0 1159100 12903000 8698500 0 7883500 33068000 19806 1126 18035 166030;166031;166032;166033;166034;166035;166036;166037;166038;166039;166040 132235;132236;132237;132238;132239;132240;132241;132242 132240 8 GPFLVALGK Unmodified 900.54329 0.54328858 3865 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.583 76.668 2 0.0052015 88724 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 80.462 57.426 85126000 0 0 0 4315000 0 8449700 6800900 6941400 5291600 10348000 9027200 0 7443000 7020300 19490000 19807 3865 18036 166041;166042;166043;166044;166045;166046;166047;166048;166049;166050;166051 132243;132244;132245;132246;132247;132248;132249;132250;132251;132252;132253 132251 11 GPFSEISAFK Unmodified 1081.5444 0.5444108 1663 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.499 76.551 2 0.0029455 88528 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 78.516 57.996 160540000 0 0 0 6592300 6457400 12446000 11017000 14528000 8818700 16258000 13717000 20969000 18422000 0 31316000 19808 1663 18037 166052;166053;166054;166055;166056;166057;166058;166059;166060;166061;166062 132254;132255;132256;132257;132258;132259;132260;132261;132262;132263;132264;132265 132254 12 GPFTDVVTTNLK Unmodified 1290.682 0.68196691 4794;638 Q9P0L0;O95292 VAPA;VAPB Vesicle-associated membrane protein-associated protein A;Vesicle-associated membrane protein-associated protein B/C no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.24 3.19 2 2 13 2 1 1 1 1 1 2 1 1 1 1 1 1 1 1 75.033 74.021 2 1.5864E-09 89553 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 154.01 142.16 553180000 93154000 36724000 20503000 20581000 28204000 31421000 49344000 30492000 25650000 31683000 37208000 54818000 24850000 30739000 37812000 19809 4794;638 18038 166063;166064;166065;166066;166067;166068;166069;166070;166071;166072;166073;166074;166075;166076;166077;166078;166079 132266;132267;132268;132269;132270;132271;132272;132273;132274;132275;132276;132277;132278 132271 12 GPFVEAEVPDVDLECPDAK Unmodified 2085.9565 0.95648679 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.12 2.42 1 1 15 1 1 1 1 1 1 1 1 1 1 1 2 2 2 83.037 82.435 2;3 2.5999E-71 102242 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 178.58 143.9 210420000 19687000 45569000 0 2026000 8638600 10656000 5508300 13812000 10532000 10250000 10643000 13847000 10972000 16112000 32169000 19810 2172 18039 166080;166081;166082;166083;166084;166085;166086;166087;166088;166089;166090;166091;166092;166093;166094;166095;166096 132279;132280;132281;132282;132283;132284;132285;132286;132287;132288;132289;132290;132291;132292;132293 132286 15 GPFVTWQVVR Unmodified 1187.6451 0.64512789 2189 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 0 0 0 By matching By MS/MS By matching By matching By matching By matching 10 0 6 1 1 1 1 1 1 80.277 80.321 2 0.028083 92800 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 53.968 32.52 16624000 0 0 0 0 933140 4853800 1274900 0 1957800 0 0 0 4915400 2688700 0 19811 2189 18040 166097;166098;166099;166100;166101;166102 132294 132294 1 GPGAGEGPGGAFAR Unmodified 1199.5683 0.56833414 44;4563 C4AMC7;Q6VEQ5;Q9NQA3 WASH3P;WASH2P;WASH6P Putative WAS protein family homolog 3;WAS protein family homolog 2;WAS protein family homolog 6 no no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 36.232 34.904 2 0.0017779 37903 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 61.765 47.627 47931000 0 10468000 3827300 5391300 0 0 0 0 0 8576200 8858500 0 0 10809000 0 19812 44;4563 18041 166103;166104;166105;166106;166107;166108 132295;132296 132296 2 GPGAGGDEATAGGGSAPQPPRLEYYESEK Unmodified 2847.2947 0.29474464 5203 Q9Y4H2 IRS2 Insulin receptor substrate 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 2 1 1 1 61.119 61.273 3 9.4717E-33 68996 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 84.404 81.248 84895000 0 0 0 5457000 0 8263600 7469600 0 5336000 10963000 6534900 14546000 6902000 9628200 9795500 19813 5203 18042 166109;166110;166111;166112;166113;166114;166115;166116;166117;166118;166119 132297;132298;132299;132300;132301;132302;132303;132304 132300 7 GPGASGEQPEPGEAAAGGAAEEAR Unmodified 2164.9621 0.96211753 4382 Q9H3P7 ACBD3 Golgi resident protein GCP60 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 1 1 1 2 1 1 2 37.26 37.52 2;3 1.3264E-44 40536 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 144.33 131.13 253330000 0 0 0 10283000 11498000 22014000 12107000 9462200 10169000 18265000 27003000 36531000 14937000 16372000 64689000 19814 4382 18043 166120;166121;166122;166123;166124;166125;166126;166127;166128;166129;166130;166131;166132;166133 132305;132306;132307;132308;132309;132310;132311;132312;132313;132314;132315;132316;132317;132318 132309 14 GPGDGGNRDHWK Unmodified 1294.5803 0.58029581 1166 P23588 EIF4B Eukaryotic translation initiation factor 4B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 8.2306 8.4825 3 0.00044887 5948 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 58.132 31.426 87947000 0 0 0 0 0 0 0 0 3312100 0 24951000 19769000 6046000 8923200 24946000 19815 1166 18044 166134;166135;166136;166137;166138;166139 132319;132320;132321;132322 132320 3 GPGDTSNFDDYEEEEIRVSINEK Unmodified 2642.162 0.16199913 1056 P17612 PRKACA cAMP-dependent protein kinase catalytic subunit alpha yes yes 0 0 1 By MS/MS 2 0 1 1 80.478 72.348 3 2.3447E-96 94917 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 149.85 149.85 35772000 35772000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19816 1056 18045 166140 132323 132323 1 GPGLASGQLYSYPAR Unmodified 1535.7732 0.77324153 3660 Q92785 DPF2 Zinc finger protein ubi-d4 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 64.719 64.714 2 3.2952E-10 74079 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 96.604 72.515 35150000 0 0 0 4901500 4286700 0 4747100 0 3296800 0 7874900 0 0 0 10043000 19817 3660 18046 166141;166142;166143;166144;166145;166146;166147;166148;166149;166150 132324;132325;132326;132327;132328;132329;132330;132331 132328 8 GPGLAVQSGDK Unmodified 1027.5298 0.52982336 3948 Q96PK6 RBM14 RNA-binding protein 14 yes yes 0 0 0 By MS/MS 10 0 1 1 24.135 24.132 2 0.044189 25629 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 50.034 22.896 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19818 3948 18047 166151 132332 132332 1 GPGLHGCQPGSVSVDK Unmodified 1593.7569 0.75693954 4121 Q9BRZ2 TRIM56 E3 ubiquitin-protein ligase TRIM56 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 37.955 33.062 3 0.0031821 41751 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 48.405 36.931 38630000 24898000 9346500 4386100 0 0 0 0 0 0 0 0 0 0 0 0 19819 4121 18048 166152;166153;166154;166155 132333;132334;132335;132336 132336 4 GPGLNLPPPIGGAGPPLGLPK Unmodified 1918.104 0.10401815 3653 Q92733 PRCC Proline-rich protein PRCC yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 2 1 2 2 1 2 2 92.264 92.384 2;3 0.00029218 107307 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 44.616 36.311 74823000 0 0 0 0 986450 1744500 0 5480100 1978000 13596000 7835800 2926800 0 5783400 34491000 19820 3653 18049 166156;166157;166158;166159;166160;166161;166162;166163;166164;166165;166166;166167;166168;166169 132337;132338;132339;132340;132341;132342;132343 132343 6 GPGNPVPGPLAPLPDYMSEEK Oxidation (M) 2180.046 0.0459705 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 1 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 80.173 80.191 2 1.8759E-05 92671 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 53.001 40.021 28670000 0 0 0 2347800 0 5290300 4315200 0 0 5064800 5739300 0 5912900 0 0 19821 2930 18050 166170;166171;166172;166173;166174;166175 132344;132345;132346 132344 4555 3 GPGNPVPGPLAPLPDYMSEEK Unmodified 2164.0511 0.051055878 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 0 By MS/MS 10 0 1 1 85.438 85.606 2 0.001654 98958 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.314 50.33 5028900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5028900 19822 2930 18050 166176 132347 132347 1 GPGPEGGGGGSYFSGQGSDTGASLK Unmodified 2225.9825 0.98251862 1052 P17275 JUNB Transcription factor jun-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 55.652 55.778 2;3 2.187E-50 62686 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 126.63 121.33 174080000 0 0 0 9646200 9398300 11426000 13079000 11078000 8067300 16503000 19912000 25120000 14221000 14145000 21481000 19823 1052 18051 166177;166178;166179;166180;166181;166182;166183;166184;166185;166186;166187;166188;166189;166190;166191;166192;166193;166194;166195;166196;166197;166198;166199;166200 132348;132349;132350;132351;132352;132353;132354;132355;132356;132357;132358;132359;132360;132361;132362 132351 12 GPGPGGPGGAGVAR Unmodified 1105.5629 0.56285483 3650 Q92686 NRGN Neurogranin;NEUG(55-78) yes yes 0 0 0 By matching By MS/MS By matching 10 0 3 1 1 1 21.163 21.477 2 0.022236 21112 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 34.803 16.02 7692100 0 0 0 0 0 1536100 0 0 0 0 0 0 0 2106300 4049700 19824 3650 18052 166201;166202;166203 132363 132363 1 GPGPGGPGGAGVARGGAGGGPSGD Unmodified 1817.8405 0.84048625 3650 Q92686 NRGN Neurogranin;NEUG(55-78) yes yes 0 0 1 By MS/MS 2 0 1 1 34.099 27.867 2 6.7045E-81 39114 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 144.12 138.28 11261000 11261000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19825 3650 18053 166204 132364 132364 1 GPGPLQER Unmodified 852.44537 0.44536545 1473 P43243 MATR3 Matrin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 2 20.896 21.111 2 0.0043522 22350 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 111.01 42.093 1420100000 0 0 0 76802000 72042000 101480000 96701000 101180000 78513000 125200000 0 182550000 154300000 142580000 288760000 19826 1473 18054 166205;166206;166207;166208;166209;166210;166211;166212;166213;166214;166215;166216 132365;132366;132367;132368;132369;132370;132371;132372;132373;132374;132375;132376;132377;132378;132379;132380;132381;132382;132383;132384;132385 132384 21 GPGRPVPPSPAPGGS Unmodified 1328.6837 0.68369824 1112 P20749 BCL3 B-cell lymphoma 3 protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 34.981 35.185 2 0.0333 37651 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.1 59.271 78379000 0 0 0 5117000 3004900 0 5790500 4997700 0 9781700 9165800 7735000 10274000 11043000 11470000 19827 1112 18055 166217;166218;166219;166220;166221;166222;166223;166224;166225;166226 132386 132386 1 GPGTSAEFSEFPLVNVNDNR Unmodified 2149.0076 0.0076111585 5074 Q9UQR1 ZNF148 Zinc finger protein 148 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 1 1 2 1 2 2 2 2 2 2 84.863 84.979 2;3 1.4261E-20 98207 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.342 84.058 102830000 0 0 0 0 7409000 9883500 0 8167600 4675900 14363000 9415900 11601000 7129200 8707200 21476000 19828 5074 18056 166227;166228;166229;166230;166231;166232;166233;166234;166235;166236;166237;166238;166239;166240;166241;166242;166243;166244 132387;132388;132389;132390;132391;132392;132393;132394;132395;132396;132397;132398;132399;132400;132401 132390 15 GPGVDLPSVNLSMPK Unmodified 1509.7861 0.78611441 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 86.929 82.896 2 0.00056849 103066 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.09 70.613 60413000 0 60413000 0 0 0 0 0 0 0 0 0 0 0 0 0 19829 2172 18057 166245;166246 132402;132403 132402 2 GPGVDVNLK Unmodified 897.49198 0.4919813 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 42.18 41.924 2 0.0057978 47078 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 76.774 58.45 496430000 0 53550000 0 21957000 28194000 26569000 38325000 33419000 28730000 34943000 36360000 48695000 46351000 40576000 58760000 19830 2172 18058 166247;166248;166249;166250;166251;166252;166253;166254;166255;166256;166257;166258;166259 132404;132405;132406;132407;132408;132409;132410;132411;132412;132413;132414;132415;132416;132417 132412 14 GPGVGLLGISK Unmodified 996.59678 0.59678072 1593 Q86TX2;P49753 ACOT1;ACOT2 Acyl-coenzyme A thioesterase 1;Acyl-coenzyme A thioesterase 2, mitochondrial yes no 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 76.111 70.21 2 0.015957 91450 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.005 47.469 18424000 13572000 4852500 0 0 0 0 0 0 0 0 0 0 0 0 0 19831 1593 18059 166260;166261 132418;132419 132419 2 GPGVPFQR Unmodified 856.45554 0.45553621 1530 P47929 LGALS7 Galectin-7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 40.313 40.383 2 0.0069015 44996 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 91.584 65.475 1132100000 0 0 0 603160000 56043000 51970000 58565000 260750000 0 0 55266000 46382000 0 0 0 19832 1530 18060 166262;166263;166264;166265;166266;166267;166268 132420;132421;132422;132423;132424;132425;132426;132427;132428;132429 132422 10 GPGYPQAEALLAEAMLK Unmodified 1757.9022 0.9022068 4075 Q99962 SH3GL2 Endophilin-A1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 98.3 91.868 3 0.0002035 115851 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.346 74.289 20911000 4921400 15990000 0 0 0 0 0 0 0 0 0 0 0 0 0 19833 4075 18061 166269;166270 132430;132431 132430 2 GPGYPQAEALLAEAMLK Oxidation (M) 1773.8971 0.89712142 4075 Q99962 SH3GL2 Endophilin-A1 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 91.529 87.844 3 0.0029128 108986 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 52.569 41.911 15680000 0 13830000 1849600 0 0 0 0 0 0 0 0 0 0 0 0 19834 4075 18061 166271;166272 132432 132432 5580 0 GPHCERPLTQEELLR Unmodified 1833.9156 0.91556545 2592 Q15906 VPS72 Vacuolar protein sorting-associated protein 72 homolog yes yes 0 0 1 By matching By MS/MS By MS/MS 10 0 3 1 1 1 45.15 45.528 4 0.049997 49852 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 27.263 21.72 30578000 0 0 0 0 0 7713900 0 0 0 0 0 0 10032000 0 12832000 19835 2592 18062 166273;166274;166275 132433 132433 1 GPHHLDNSSPGPGSEAR Unmodified 1713.7819 0.78190874 3576 Q8WWM7 ATXN2L Ataxin-2-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 13.194 13.283 3 0.0069561 12693 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 34.498 30.029 26161000 0 0 0 2002700 1290300 2489700 2815900 2683100 1769100 0 0 0 3919100 2957600 6234100 19836 3576 18063 166276;166277;166278;166279;166280;166281;166282;166283;166284;166285 132434;132435;132436;132437 132437 4 GPHPAPLSK Unmodified 902.4974 0.49740102 3992 Q96SN8 CDK5RAP2 CDK5 regulatory subunit-associated protein 2 yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 15.33 12.122 2 0.00071248 17771 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 120.92 71.596 29476000 22421000 0 7054500 0 0 0 0 0 0 0 0 0 0 0 0 19837 3992 18064 166286;166287 132438 132438 1 GPHSSGLCYAR Unmodified 1203.5455 0.5454902 5394 yes yes 0 0 0 By MS/MS 10 0 1 1 7.3508 7.4854 2 0.029619 5631 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 38.962 2.6287 + 8587100 0 0 0 0 0 0 0 0 0 0 0 8587100 0 0 0 19838 5394 18065 166288 132439 132439 1 GPHVDVSGPDIDIEGPEGK Unmodified 1916.9116 0.91158551 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.24 3.75 5 1 11 3 2 1 1 1 1 1 1 1 1 1 1 1 1 69.568 67.898 3 1.1219E-23 82469 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 116.06 112.09 316500000 49761000 130620000 8451900 3119600 8210600 9841800 0 13030000 8694700 14827000 10512000 15739000 9532700 11915000 22236000 19839 2172 18066 166289;166290;166291;166292;166293;166294;166295;166296;166297;166298;166299;166300;166301;166302;166303;166304;166305 132440;132441;132442;132443;132444;132445;132446;132447;132448;132449;132450;132451;132452;132453;132454;132455 132443 14 GPIAAGTSDHFTK Unmodified 1300.6412 0.64116473 3436 Q8NEZ4 KMT2C Histone-lysine N-methyltransferase 2C yes yes 0 0 0 By MS/MS 2 0 2 2 39.454 32.832 2;3 0.0021281 45752 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.533 64.085 30645000 30645000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19840 3436 18067 166306;166307 132456;132457 132457 2 GPIAFWAR Unmodified 916.49192 0.49192172 5031 Q9UNF1 MAGED2 Melanoma-associated antigen D2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 2 1 1 1 1 1 75.102 75.166 2 0.0042941 86081 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 111.69 101.26 561270000 0 0 0 23966000 21699000 50687000 40087000 43756000 45417000 48716000 46890000 71058000 32888000 38184000 97922000 19841 5031 18068 166308;166309;166310;166311;166312;166313;166314;166315;166316;166317;166318;166319;166320 132458;132459;132460;132461;132462;132463;132464;132465;132466;132467;132468;132469 132462 12 GPIHSPVELK Unmodified 1075.6026 0.60259438 2623 Q16649 NFIL3 Nuclear factor interleukin-3-regulated protein yes yes 0 0 0 By MS/MS 2 0 1 1 56.351 48.204 2 0.043378 65965 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.91 23.352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19842 2623 18069 166321 132470 132470 1 GPILSFASTR Unmodified 1047.5713 0.57129425 1424 P40937 RFC5 Replication factor C subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.864 66.947 2 0.001504 76374 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 90.657 73.56 251990000 0 0 0 11024000 15281000 24897000 17172000 19668000 11906000 22940000 24593000 31314000 19338000 21148000 32716000 19843 1424 18070 166322;166323;166324;166325;166326;166327;166328;166329;166330;166331;166332;166333 132471;132472;132473;132474;132475;132476;132477;132478;132479;132480;132481 132474 10 GPIPSLFSGQHGPPPYGDSR Unmodified 2065.0017 0.0017379196 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.078 77.138 3 4.8987E-15 88610 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.654 87.161 63595000 0 0 0 1492500 1895000 4895800 2503900 3793400 4875600 4907500 4091300 8757200 3561100 6288100 16534000 19844 4139 18071 166334;166335;166336;166337;166338;166339;166340;166341;166342;166343;166344;166345 132482;132483;132484;132485;132486;132487;132488;132489;132490;132491;132492 132485 11 GPIRAPEHLR Unmodified 1144.6465 0.64652488 293 O15541 RNF113A RING finger protein 113A yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.213 26.414 3 0.0087287 27260 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 41.109 24.167 115130000 0 0 0 5101400 3356400 10764000 7854000 7972300 5709300 6945000 10943000 13071000 10748000 7345000 25322000 19845 293 18072 166346;166347;166348;166349;166350;166351;166352;166353;166354;166355;166356;166357 132493;132494;132495 132495 2 GPITAVAFAPDGR Unmodified 1270.667 0.66698555 5197 Q9Y4E6 WDR7 WD repeat-containing protein 7 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 70.829 70.868 2 0.0016512 80615 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 62.303 43.032 26228000 0 0 0 1799300 1616800 2415400 2106400 2051300 1821300 2596900 3235800 3321000 2703600 2560100 0 19846 5197 18073 166358;166359;166360;166361;166362;166363;166364;166365;166366;166367;166368 132496;132497;132498;132499;132500;132501;132502 132500 5 GPLAAAFSSSEVK Unmodified 1262.6507 0.65066678 311 O43264 ZW10 Centromere/kinetochore protein zw10 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.69 3.47 2 2 9 2 1 1 1 1 1 1 1 1 1 1 1 66.437 64.717 2 3.7045E-07 80491 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 112.36 93.577 124380000 59919000 4001300 2064600 0 3653900 11785000 4746300 6234800 0 8865400 0 0 5196200 6782500 11131000 19847 311 18074 166369;166370;166371;166372;166373;166374;166375;166376;166377;166378;166379;166380;166381 132503;132504;132505;132506;132507;132508;132509;132510;132511;132512;132513 132506 10 GPLAELPSAR Unmodified 1009.5556 0.55564418 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 55.034 55.173 2 0.030985 62733 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 42.864 25.624 116720000 0 0 0 8782000 9680900 0 8009300 9214800 5641500 10732000 13029000 13106000 10851000 11229000 16448000 19848 4285 18075 166382;166383;166384;166385;166386;166387;166388;166389;166390;166391;166392 132514 132514 1 GPLAIREDPDK Unmodified 1209.6354 0.63535107 3205 Q86Y91 KIF18B Kinesin-like protein KIF18B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.305 33.489 3 0.014911 36724 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 42.001 32.568 67141000 0 0 0 2958100 5106700 4857500 5578900 4076100 5543900 5811900 5773300 8210700 4928600 5675200 8619800 19849 3205 18076 166393;166394;166395;166396;166397;166398;166399;166400;166401;166402;166403;166404 132515;132516;132517 132515 3 GPLAMGLAQPR Unmodified 1109.6015 0.60154852 4208 Q9BWE0 REPIN1 Replication initiator 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 61.597 61.72 2 0.0017439 69714 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.919 62.056 26581000 0 0 0 2550300 0 2549800 1852300 2247600 1831400 2846800 4028400 0 2471700 2607500 3595500 19850 4208 18077 166405;166406;166407;166408;166409;166410;166411;166412;166413;166414 132518;132519;132520;132521 132519 4 GPLATGGIK Unmodified 812.4756 0.47560295 5116 Q9Y2S6 TMA7 Translation machinery-associated protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.53 3 2 11 2 2 1 1 1 1 1 1 1 1 1 1 1 1 31.712 30.321 2 0.00053503 40224 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.69 40.075 2700600000 1084200000 1048700000 359910000 12990000 8521400 6955700 8123200 7577800 6617400 8269800 27703000 38843000 0 23757000 58387000 19851 5116 18078 166415;166416;166417;166418;166419;166420;166421;166422;166423;166424;166425;166426;166427;166428;166429;166430 132522;132523;132524;132525;132526;132527;132528;132529;132530;132531;132532;132533;132534;132535;132536;132537;132538;132539;132540;132541;132542;132543 132526 21 GPLDNFLR Unmodified 930.49232 0.49231565 2234 Q13111 CHAF1A Chromatin assembly factor 1 subunit A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.781 77.84 2 0.013714 89889 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 71.715 51.16 91140000 0 0 0 4366900 5695500 8869400 4924500 6386800 7201800 7325900 6996000 9395400 7102600 6930800 15945000 19852 2234 18079 166431;166432;166433;166434;166435;166436;166437;166438;166439;166440;166441;166442 132544;132545 132545 1 GPLEPSEPAVVAAAR Unmodified 1462.778 0.77799256 1246 P29372 MPG DNA-3-methyladenine glycosylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 63.797 63.805 2 4.0558E-06 73760 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 83.397 62.526 86262000 0 0 0 6252600 5885600 9881900 7910100 6944300 5403700 13188000 9559700 0 11726000 9510400 0 19853 1246 18080 166443;166444;166445;166446;166447;166448;166449;166450;166451;166452 132546;132547;132548;132549;132550;132551;132552;132553;132554;132555 132554 9 GPLGPGGRGPIFELK Unmodified 1493.8354 0.83544786 4574 Q9NQS1 AVEN Cell death regulator Aven yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.883 74.946 3 0.00094347 86243 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.546 46.231 101120000 0 0 0 4143800 2765000 14611000 5139600 8594200 11073000 9423000 5989700 6630000 5968900 5794700 20990000 19854 4574 18081 166453;166454;166455;166456;166457;166458;166459;166460;166461;166462;166463;166464 132556;132557;132558;132559;132560;132561;132562;132563;132564;132565 132556 10 GPLLEDGALSQAVSAGASSPEFTK Unmodified 2331.1594 0.15942035 3407 Q8NCA5 FAM98A Protein FAM98A yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 4 2 4 2 86.81 83.311 2;3 8.8012E-15 99524 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 71.756 65.497 119690000 0 104460000 15230000 0 0 0 0 0 0 0 0 0 0 0 0 19855 3407 18082 166465;166466;166467;166468;166469;166470 132566;132567;132568;132569;132570 132567 4 GPLLEEQALTK Unmodified 1197.6605 0.66050319 2693 Q52LJ0 FAM98B Protein FAM98B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 59.715 58.845 2 4.265E-09 72886 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 150.35 126.56 2421600000 0 1326000000 419460000 52630000 44383000 56492000 58012000 44751000 45902000 63719000 62737000 72600000 50560000 43843000 80523000 19856 2693 18083 166471;166472;166473;166474;166475;166476;166477;166478;166479;166480;166481;166482;166483;166484;166485;166486 132571;132572;132573;132574;132575;132576;132577;132578;132579;132580;132581;132582;132583;132584;132585;132586;132587;132588 132578 17 GPLLVSTESHPVK Unmodified 1362.7507 0.75071518 5145 Q9Y3A4 RRP7A Ribosomal RNA-processing protein 7 homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 6.55 3.8 3 2 6 1 3 1 1 1 1 1 1 1 46.458 43.956 2;3 0.00088768 55482 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 66.498 56.426 145420000 65768000 29111000 11722000 4939700 5436500 0 6388300 0 0 5999200 6934900 0 9119000 0 0 19857 5145 18084 166487;166488;166489;166490;166491;166492;166493;166494;166495;166496;166497 132589;132590;132591;132592;132593;132594;132595;132596;132597;132598;132599 132592 10 GPLLYCARPPQDLK Unmodified 1626.8552 0.85519702 3314 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 yes yes 0 0 1 By MS/MS 2 0 1 1 72.951 64.755 3 0.0036826 85897 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.625 36.46 3408400 3408400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19858 3314 18085 166498 132600 132600 1 GPLMMYISK Unmodified 1038.5242 0.5242094 980 P13639 EEF2 Elongation factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.93 2.63 1 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72.838 72.068 2 0.0065089 94844 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.44 73.148 254170000 33391000 7913300 0 4935200 3502600 6379000 3956100 8889700 3942100 7399400 18334000 15490000 4612200 17983000 117440000 19859 980 18086 166499;166500;166501;166502;166503;166504;166505;166506;166507;166508;166509;166510;166511;166512 132601;132602;132603;132604;132605;132606;132607;132608;132609;132610;132611;132612;132613 132607 13 GPLMMYISK Oxidation (M) 1054.5191 0.51912402 980 P13639 EEF2 Elongation factor 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.57 2.95 2 2 17 2 2 1 1 1 2 2 1 1 2 1 2 1 2 64.55 63.033 2 0.0021431 69675 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.657 74.454 384580000 45392000 36047000 0 7828800 5078200 9893600 8100100 7094800 6166100 8933400 24516000 27280000 7022800 0 191230000 19860 980 18086 166513;166514;166515;166516;166517;166518;166519;166520;166521;166522;166523;166524;166525;166526;166527;166528;166529;166530;166531;166532;166533 132614;132615;132616;132617;132618;132619;132620;132621;132622;132623;132624;132625;132626;132627;132628 132616 1308;1309 14 GPLMMYISK 2 Oxidation (M) 1070.514 0.51403865 980 P13639 EEF2 Elongation factor 2 yes yes 0 2 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 7 3.46 6 8 3 3 1 1 1 1 1 2 1 51.903 49.806 2 0.0064386 55028 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 80.165 64.284 183930000 12895000 49949000 0 8639900 5524000 0 0 0 5290000 0 20502000 18775000 0 27038000 35316000 19861 980 18086 166534;166535;166536;166537;166538;166539;166540;166541;166542;166543;166544;166545;166546;166547 132629;132630;132631;132632;132633;132634;132635;132636 132633 1308;1309 3 GPLPAAPPVAPER Unmodified 1270.7034 0.70337105 4566 Q9NQC3 RTN4 Reticulon-4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.664 61.764 2 6.3173E-08 70150 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 120.09 108.93 691420000 0 0 0 40776000 50932000 45357000 51833000 49241000 31779000 62236000 77152000 94905000 62587000 46960000 77669000 19862 4566 18087 166548;166549;166550;166551;166552;166553;166554;166555;166556;166557;166558;166559 132637;132638;132639;132640;132641;132642;132643;132644;132645;132646;132647;132648 132639 9 GPLPAAPPVAPERQPSWDPSPVSSTVPAPSPLSAAAVSPSK Unmodified 3999.0742 0.074181166 4566 Q9NQC3 RTN4 Reticulon-4 yes yes 0 0 1 By matching By MS/MS By MS/MS 10 0 3 1 1 1 86.922 87.075 4 6.6399E-11 100772 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 34.737 33.349 17984000 0 0 0 0 0 0 0 0 3440800 6286400 0 0 0 0 8257200 19863 4566 18088 166560;166561;166562 132649;132650;132651 132650 3 GPLPAGPPPEDVPGPPK Unmodified 1620.8512 0.8511575 2944 Q6PCT2 FBXL19 F-box/LRR-repeat protein 19 yes yes 0 0 0 By MS/MS 2 0 2 2 73.373 67.828 2 0.0017543 85780 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.815 52.79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19864 2944 18089 166563;166564 132652;132653 132652 2 GPLPAGTILK Unmodified 965.59097 0.59096706 1663 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 64.958 63.787 2 0.0052705 72158 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 69.628 47.668 1554900000 137470000 238440000 0 69760000 78184000 92429000 85694000 82161000 78220000 93371000 112240000 137730000 111550000 115370000 122230000 19865 1663 18090 166565;166566;166567;166568;166569;166570;166571;166572;166573;166574;166575;166576;166577;166578;166579 132654;132655;132656;132657;132658;132659;132660;132661;132662;132663;132664;132665;132666;132667;132668 132659 15 GPLPLSSQHR Unmodified 1090.5883 0.5883413 1473 P43243 MATR3 Matrin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.812 30.003 2 0.0049656 31768 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 70.856 24.43 341670000 0 0 0 19532000 18066000 16413000 23028000 23803000 18899000 21910000 35252000 35674000 43724000 31898000 53471000 19866 1473 18091 166580;166581;166582;166583;166584;166585;166586;166587;166588;166589;166590;166591 132669;132670;132671;132672;132673;132674;132675;132676;132677;132678;132679;132680;132681 132678 13 GPLPMEAIEK Unmodified 1083.5634 0.56343168 2921 Q6P1N0 CC2D1A Coiled-coil and C2 domain-containing protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 64.208 63.934 2 0.0044145 73003 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 72.928 50.037 68900000 0 5260500 0 3190700 3625500 4426100 4026100 4394400 3461900 6550900 6476000 5184400 5095200 5281200 11927000 19867 2921 18092 166592;166593;166594;166595;166596;166597;166598;166599;166600;166601;166602;166603;166604 132682;132683;132684;132685;132686;132687;132688;132689;132690;132691;132692 132687 11 GPLQDGATTDANGR Unmodified 1371.6379 0.63787026 3065 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.287 23.491 2 1.3557E-08 24612 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 97.456 82.196 38774000 0 0 0 2379000 2523300 2736200 3456100 2871600 2016500 2850600 3813300 5983400 3460200 3136100 3547600 19868 3065 18093 166605;166606;166607;166608;166609;166610;166611;166612;166613;166614;166615;166616 132693;132694;132695;132696;132697;132698;132699;132700;132701;132702 132697 8 GPLQSVQVFGR Unmodified 1186.6459 0.64585618 1879 P62249 RPS16 40S ribosomal protein S16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.263 72.334 2 6.9056E-05 83173 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 112.84 92.322 1694500000 0 0 0 89506000 115450000 146750000 121830000 123850000 93332000 163470000 145860000 189520000 131790000 136140000 236960000 19869 1879 18094 166617;166618;166619;166620;166621;166622;166623;166624;166625;166626;166627;166628 132703;132704;132705;132706;132707;132708;132709;132710;132711;132712;132713;132714;132715;132716;132717 132703 11 GPLQSVQVFGRK Unmodified 1314.7408 0.74081919 1879 P62249 RPS16 40S ribosomal protein S16 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.513 60.618 3 2.3877E-09 69250 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 113.38 106.25 125890000 0 0 0 6833100 3794400 16908000 7447400 4365600 11292000 6537300 7141400 19977000 13365000 9063300 19162000 19870 1879 18095 166629;166630;166631;166632;166633;166634;166635;166636;166637;166638;166639;166640 132718;132719;132720;132721;132722;132723;132724;132725;132726 132718 9 GPLREPCALTLAQR Unmodified 1580.8457 0.84569497 2066 Q01968 OCRL Inositol polyphosphate 5-phosphatase OCRL-1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 60.842 61.11 3 0.0083853 69035 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 31.58 19.665 25849000 0 0 0 0 0 4244300 2589400 0 1660800 2976100 2831200 4647400 0 0 6900100 19871 2066 18096 166641;166642;166643;166644;166645;166646;166647 132727;132728;132729;132730;132731 132730 4 GPLSGAASWEHIK Unmodified 1351.6884 0.68844927 2924 Q6P1R4 DUS1L tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like yes yes 0 0 0 By MS/MS 2 0 1 1 73.027 64.831 3 0.0061994 85791 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.28 36.55 13183000 13183000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19872 2924 18097 166648 132732 132732 1 GPLSSAPEIVHEDLK Unmodified 1590.8253 0.82533668 2037 Q00536 CDK16 Cyclin-dependent kinase 16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.846 68.926 3 0.0010083 78711 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 50.843 38.678 87804000 0 0 0 3764100 3376300 9243600 6112000 6693400 4524200 9232400 7920500 9575100 6980400 7077800 13304000 19873 2037 18098 166649;166650;166651;166652;166653;166654;166655;166656;166657;166658;166659;166660 132733;132734;132735;132736;132737;132738;132739;132740;132741;132742;132743;132744 132738 11 GPLTISAQENVK Unmodified 1255.6772 0.67721588 2581 Q15811 ITSN1 Intersectin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 54.004 48.313 2 0.0052882 59704 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 73.985 49.763 + 119040000 11102000 98779000 9156100 0 0 0 0 0 0 0 0 0 0 0 0 19874 2581 18099 166661;166662;166663;166664 132745;132746;132747;132748 132746 3 GPLTVAQK Unmodified 812.4756 0.47560295 2062 Q01780 EXOSC10 Exosome component 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 27.23 22.98 2 0.027252 28916 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 78.616 42.43 41841000 15277000 24926000 1637600 0 0 0 0 0 0 0 0 0 0 0 0 19875 2062 18100 166665;166666;166667;166668 132749;132750;132751 132750 3 GPLTVEETPR Unmodified 1097.5717 0.57168818 2427 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.021 40.201 2 0.0018247 45480 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 101.25 87.257 185190000 0 0 0 8723100 8032500 11302000 10844000 9472000 6804300 19293000 19579000 25535000 17997000 14591000 33018000 19876 2427 18101 166669;166670;166671;166672;166673;166674;166675;166676;166677;166678;166679;166680 132752;132753;132754;132755;132756;132757;132758 132756 6 GPLVNASLR Unmodified 925.53451 0.53451481 208 O14744 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.705 45.874 2 0.011037 51598 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 63.419 38.525 117700000 0 0 0 10851000 7659600 7828700 9892200 9375800 4566600 7521300 11222000 13473000 12170000 7544700 15595000 19877 208 18102 166681;166682;166683;166684;166685;166686;166687;166688;166689;166690;166691;166692 132759 132759 1 GPMGPGPGQSGPK Unmodified 1165.555 0.55499226 1151 P23246 SFPQ Splicing factor, proline- and glutamine-rich yes yes 0 0 0 By MS/MS 10 0 1 1 20.693 21.332 2 0.021872 21151 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.445 36.294 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19878 1151 18103 166693 132760 132760 1 GPNAEQLR Unmodified 883.45118 0.45117911 5051 Q9UPN7 PPP6R1 Serine/threonine-protein phosphatase 6 regulatory subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 15.881 16.072 2 0.0063262 15838 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 127.12 75.545 137150000 0 0 0 5730500 5107100 0 9308100 6893200 5980500 12881000 15896000 14656000 19634000 18337000 22726000 19879 5051 18104 166694;166695;166696;166697;166698;166699;166700;166701;166702;166703;166704 132761;132762 132761 2 GPNAVQLVK Unmodified 924.53927 0.53926584 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 40.671 39.679 2 3.7407E-84 49256 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 237.64 153.28 1515900000 99755000 956620000 0 22303000 19537000 54340000 32728000 23649000 22983000 40055000 50853000 45624000 38088000 36952000 72378000 19880 3119 18105 166705;166706;166707;166708;166709;166710;166711;166712;166713;166714;166715;166716;166717;166718;166719 132763;132764;132765;132766;132767;132768;132769;132770;132771;132772;132773;132774;132775;132776;132777;132778;132779;132780;132781;132782;132783 132772 21 GPNCIEHNEALLEEAK Unmodified 1822.852 0.85196214 2313 Q13546 RIPK1 Receptor-interacting serine/threonine-protein kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.24 2 1 10 2 1 1 1 1 1 1 1 1 1 1 1 56.147 55.156 3 0.00011911 72413 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.429 77.09 188070000 0 108500000 13803000 0 4928900 5944700 7422400 9086800 3624300 5855700 6376200 0 5764600 7396800 9372700 19881 2313 18106 166720;166721;166722;166723;166724;166725;166726;166727;166728;166729;166730;166731;166732 132784;132785;132786;132787;132788;132789;132790;132791;132792;132793;132794 132786 10 GPNGAIFELGPR Unmodified 1226.6408 0.6407708 1619 P50336 PPOX Protoporphyrinogen oxidase yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching 10 0 5 1 1 1 1 1 74.838 74.733 2 0.043203 86409 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 42.718 21.254 19221000 0 0 0 3030100 3003700 0 3424900 0 0 5529600 0 0 4232400 0 0 19882 1619 18107 166733;166734;166735;166736;166737 132795;132796 132796 2 GPNGESSVIHDRK Unmodified 1394.6902 0.69024019 399 O60437 PPL Periplakin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.16 2.46 2 17 1 1 2 2 1 2 2 1 2 2 2 1 11.413 11.369 3 0.0057056 9797 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 39.878 29.33 58380000 0 0 7586000 9011200 3743900 2760500 2110800 6057500 2120900 6081500 0 7786700 6819100 0 4302200 19883 399 18108 166738;166739;166740;166741;166742;166743;166744;166745;166746;166747;166748;166749;166750;166751;166752;166753;166754;166755;166756 132797;132798;132799;132800;132801;132802;132803;132804;132805 132805 9 GPNGRDPLLEVYDVPPSVEK Unmodified 2180.1113 0.11134795 1788 P56945 BCAR1 Breast cancer anti-estrogen resistance protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 81.671 79.181 3 0.015787 96018 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 19.587 5.5711 2742300 0 0 2742300 0 0 0 0 0 0 0 0 0 0 0 0 19884 1788 18109 166757 132806 132806 1 GPNQPVESDESLGGLSAALR Unmodified 1995.9861 0.98614743 1664 P51617 IRAK1 Interleukin-1 receptor-associated kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 78.351 78.45 2 6.4094E-54 91032 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 154.07 140.39 50988000 0 0 0 0 4272100 0 3708900 6444900 4849400 7061700 6116200 9043400 4313600 5178000 0 19885 1664 18110 166758;166759;166760;166761;166762;166763;166764;166765;166766;166767 132807;132808;132809;132810;132811;132812;132813;132814;132815;132816;132817;132818 132816 12 GPNSALVQQLIK Unmodified 1266.7296 0.7295858 2727 Q5H9R7 PPP6R3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.498 76.556 2 0.00030493 88325 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 109.88 98.387 140210000 0 0 0 4959800 5243600 11680000 8291600 8730900 7760300 11607000 13080000 14020000 10498000 13634000 30703000 19886 2727 18111 166768;166769;166770;166771;166772;166773;166774;166775;166776;166777;166778;166779 132819;132820;132821;132822;132823;132824;132825;132826;132827;132828;132829;132830 132820 12 GPPAPAPR Unmodified 761.41842 0.41842242 4126 Q9BSJ2 TUBGCP2 Gamma-tubulin complex component 2 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 13.496 13.625 2 0.011079 12679 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 77.748 43.895 60541000 0 0 0 0 6155000 8419400 7535500 6149500 0 9096800 0 9649700 0 0 13535000 19887 4126 18112 166780;166781;166782;166783;166784;166785;166786 132831;132832;132833;132834 132834 4 GPPAPPAATPAGVYTVFR Unmodified 1767.9308 0.93080481 284 O15417 TNRC18 Trinucleotide repeat-containing gene 18 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 82.223 82.165 2 0.0010549 95053 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 67.456 56.846 10602000 0 0 0 1436900 1943600 0 0 1934200 0 3010500 0 0 2276300 0 0 19888 284 18113 166787;166788;166789;166790;166791 132835;132836;132837;132838 132836 4 GPPAPSSSLPIRQEPSSFR Unmodified 2009.033 0.033038048 5228 Q9Y5B0 CTDP1 RNA polymerase II subunit A C-terminal domain phosphatase yes yes 0 0 1 By MS/MS By matching By MS/MS 10 0 3 1 1 1 62.666 62.912 3 0.016087 71363 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 27.7 26.07 15157000 0 0 0 0 0 3964000 0 2316700 0 0 0 0 0 0 8876300 19889 5228 18114 166792;166793;166794 132839 132839 1 GPPAPTTQAQPDLIK Unmodified 1532.8199 0.81985737 4982 Q9UL03 INTS6 Integrator complex subunit 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 54.886 55.017 2 1.0127E-05 62432 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 80.69 68.114 175110000 0 0 0 11847000 10581000 9685900 14899000 14547000 13108000 11283000 16790000 22364000 19009000 13869000 17122000 19890 4982 18115 166795;166796;166797;166798;166799;166800;166801;166802;166803;166804;166805;166806 132840;132841;132842;132843;132844;132845;132846 132843 7 GPPASSPAPAPK Unmodified 1075.5662 0.56620887 2595 Q15942 ZYX Zyxin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.385 19.603 2 1.2337E-05 20155 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 107.79 92.407 264460000 0 0 0 10857000 9002800 10210000 0 12321000 11719000 29766000 32611000 42771000 20271000 28535000 56393000 19891 2595 18116 166807;166808;166809;166810;166811;166812;166813;166814;166815;166816;166817;166818 132847;132848;132849;132850;132851;132852;132853;132854;132855;132856;132857;132858;132859 132858 12 GPPCGPVNCNEK Unmodified 1327.5649 0.56490502 2127 Q06323 PSME1 Proteasome activator complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 3.6 3.26 1 2 1 1 2 2 1 39.223 37.82 2 1.1247E-17 93023 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 168.83 158.37 134240000 64915000 60060000 0 0 0 0 0 0 0 0 0 0 0 0 9269300 19892 2127 18117 166819;166820;166821;166822;166823 132860;132861;132862;132863;132864 132863 5 GPPDFSSDEEREPTPVLGSGAAAAGR Unmodified 2569.2045 0.20447307 1446;1447 P42166;P42167 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 2 1 2 1 1 1 1 1 1 1 1 66.273 66.319 3 1.1466E-33 76454 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 92.147 81.645 1898200000 0 0 0 118220000 141410000 131450000 147720000 131440000 110430000 159450000 186660000 208340000 175020000 185320000 202730000 19893 1446;1447 18118 166824;166825;166826;166827;166828;166829;166830;166831;166832;166833;166834;166835;166836;166837 132865;132866;132867 132865 2 GPPGGAGEGGPPAQAPPPPQQPPTAPPSGLK Unmodified 2808.4195 0.41949164 3155 Q86UU0 BCL9L B-cell CLL/lymphoma 9-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.115 65.202 3 3.407E-29 74608 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 67.076 60.427 191390000 0 0 0 10892000 9964900 10307000 14409000 15913000 12208000 15819000 18821000 18705000 13149000 17738000 33466000 19894 3155 18119 166838;166839;166840;166841;166842;166843;166844;166845;166846;166847;166848;166849 132868;132869;132870;132871;132872;132873;132874;132875;132876;132877;132878;132879;132880;132881 132879 14 GPPGPALPATMNNSSSETR Unmodified 1882.8843 0.8843249 2467 Q15003 NCAPH Condensin complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 55.095 55.312 2 2.3484E-17 62617 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 96.103 78.736 43970000 0 0 0 0 2923100 4534100 0 4034100 0 4664300 7417200 6744400 0 4621500 9031400 19895 2467 18120 166850;166851;166852;166853;166854;166855;166856;166857;166858 132882;132883;132884;132885;132886;132887;132888;132889;132890 132886 9 GPPHSDSCPGLTLHR Unmodified 1629.7682 0.76817293 4190 Q9BVJ7 DUSP23 Dual specificity protein phosphatase 23 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 33.492 33.682 4 0.013268 37039 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 23.481 11.504 66762000 0 0 0 2823900 4291300 4482000 4379800 5478500 0 4732900 8004100 6695800 8761100 5521100 11592000 19896 4190 18121 166859;166860;166861;166862;166863;166864;166865;166866;166867;166868;166869 132891;132892;132893;132894 132891 4 GPPIEDAIASSDVLETASK Unmodified 1898.9473 0.94730231 5184 Q9Y450 HBS1L HBS1-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.41 3.11 4 2 23 1 4 1 2 2 2 2 2 2 2 2 2 1 2 2 83.384 82.774 2;3 4.4951E-198 96057 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 220.21 190.4 1022300000 0 829910000 5377300 4621200 8372900 15987000 11604000 10814000 11415000 22515000 18691000 21954000 7308700 18407000 35313000 19897 5184 18122 166870;166871;166872;166873;166874;166875;166876;166877;166878;166879;166880;166881;166882;166883;166884;166885;166886;166887;166888;166889;166890;166891;166892;166893;166894;166895;166896;166897;166898 132895;132896;132897;132898;132899;132900;132901;132902;132903;132904;132905;132906;132907;132908;132909;132910;132911;132912;132913;132914;132915;132916;132917;132918 132911 22 GPPLEEQGALRR Unmodified 1321.7102 0.71024735 4835 Q9UBC1 NFKBIL1 NF-kappa-B inhibitor-like protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.925 35.107 3 0.0014917 37421 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.502 31.864 128590000 0 0 0 6300300 5756000 14201000 7114900 6712300 8461600 18814000 12123000 14899000 12070000 9531100 12611000 19898 4835 18123 166899;166900;166901;166902;166903;166904;166905;166906;166907;166908;166909;166910 132919;132920;132921;132922;132923;132924;132925;132926 132921 8 GPPLPAENK Unmodified 921.49198 0.4919813 4253 Q9BYV8 CEP41 Centrosomal protein of 41 kDa yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 25.482 25.644 2 0.022769 27524 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.335 32.53 152820000 0 0 0 0 0 68535000 0 0 0 53145000 0 0 0 31143000 0 19899 4253 18124 166911;166912;166913 132927;132928;132929 132927 3 GPPLPPPPPLPECLTISPPVPSGPPSK Unmodified 2724.4561 0.45606007 3703 Q93015 NAT6 N-acetyltransferase 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 2 2 2 2 1 1 1 93.437 93.598 3;4 6.1365E-11 108801 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 49.25 46.449 111050000 0 0 0 0 0 0 8675400 43096000 16433000 20399000 9766100 10480000 0 0 2201500 19900 3703 18125 166914;166915;166916;166917;166918;166919;166920;166921;166922;166923;166924 132930;132931;132932;132933;132934;132935;132936;132937;132938;132939;132940;132941;132942 132936 13 GPPLWEEDPGAK Unmodified 1294.6194 0.61936665 2412 Q14554 PDIA5 Protein disulfide-isomerase A5 yes yes 0 0 0 By MS/MS 2 0 1 1 63.323 57.416 2 0.017569 73597 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.893 57.027 21004000 0 21004000 0 0 0 0 0 0 0 0 0 0 0 0 0 19901 2412 18126 166925 132943 132943 1 GPPNGMMPAPK Unmodified 1095.5205 0.52052101 134 O00257 CBX4 E3 SUMO-protein ligase CBX4 yes yes 0 0 0 By MS/MS 2 0 1 1 43.951 38.732 2 0.02273 50401 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.246 37.028 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19902 134 18127 166926 132944 132944 1 GPPNPNVEYIPFDEMK Oxidation (M) 1861.8557 0.85565053 4736 Q9NY27 PPP4R2 Serine/threonine-protein phosphatase 4 regulatory subunit 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 76.729 76.826 2 1.6297E-15 88741 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 103.46 89.204 59157000 0 0 0 0 3259000 4909400 5368500 0 3568300 7365100 8761700 7242100 5913000 0 12770000 19903 4736 18128 166927;166928;166929;166930;166931;166932;166933;166934;166935 132945;132946;132947;132948;132949;132950;132951;132952 132949 6112 8 GPPNPNVEYIPFDEMK Unmodified 1845.8607 0.86073591 4736 Q9NY27 PPP4R2 Serine/threonine-protein phosphatase 4 regulatory subunit 2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 82.494 82.693 2 3.9088E-21 95390 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 117.2 101.66 18248000 0 0 0 0 0 0 0 0 0 0 4168300 0 0 0 14079000 19904 4736 18128 166936;166937 132953;132954 132953 2 GPPPAPEGGSR Unmodified 1020.4989 0.49885759 1502 P46379 BAG6 Large proline-rich protein BAG6 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 12.825 13.15 2 0.012787 11462 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.198 28.758 4096000 0 0 0 0 0 0 0 0 0 0 0 0 0 1888000 2207900 19905 1502 18129 166938;166939 132955 132955 1 GPPPPPGDENR Unmodified 1131.5309 0.530886 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 2 1 1 15.07 15.246 2 1.9202E-05 14366 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 124.98 107 108690000 0 0 0 5656600 6972300 5274700 8908700 5764400 5940100 8540500 14950000 10455000 11902000 11382000 12948000 19906 2290 18130 166940;166941;166942;166943;166944;166945;166946;166947;166948;166949;166950;166951;166952 132956;132957;132958;132959;132960;132961;132962;132963;132964;132965;132966 132961 11 GPPPPPGDENREMDDPSVGPK Oxidation (M) 2202.9852 0.98516116 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 34.01 34.195 3 1.072E-15 36768 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 87.676 83.289 754830000 0 0 0 46953000 50581000 53347000 65941000 51074000 41902000 0 108260000 132980000 68951000 54876000 79969000 19907 2290 18131 166953;166954;166955;166956;166957;166958;166959;166960;166961;166962;166963 132967;132968;132969;132970;132971;132972;132973;132974;132975;132976;132977;132978;132979;132980;132981;132982;132983;132984;132985 132981 3732 19 GPPPPPGDENREMDDPSVGPK Unmodified 2186.9902 0.99024653 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 2 2 1 1 1 1 1 1 1 1 1 1 42.63 42.706 3 1.2E-37 47404 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 79.511 77.892 942130000 0 0 0 57973000 62513000 64613000 55760000 67400000 45272000 78180000 84342000 131900000 85670000 73893000 134620000 19908 2290 18131 166964;166965;166966;166967;166968;166969;166970;166971;166972;166973;166974;166975;166976;166977 132986;132987;132988;132989;132990;132991;132992;132993;132994;132995;132996;132997;132998;132999;133000;133001;133002;133003;133004;133005;133006;133007;133008;133009;133010;133011;133012;133013 132994 28 GPPPPPTASEPTR Unmodified 1302.6568 0.65681479 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.953 29.149 2 4.9683E-08 31504 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 103.26 95.61 330160000 0 0 0 20196000 22567000 22490000 18236000 19252000 19393000 29718000 44856000 43662000 24795000 29010000 35981000 19909 213 18132 166978;166979;166980;166981;166982;166983;166984;166985;166986;166987;166988;166989 133014;133015;133016;133017;133018;133019;133020;133021;133022;133023;133024;133025;133026;133027;133028;133029;133030 133015 16 GPPPPPTASEPTRR Unmodified 1458.7579 0.75792582 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 20 2 1 2 1 2 1 2 2 1 2 2 2 23.383 23.604 2;3 0.00012185 25520 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 55.196 39.809 1457300000 0 0 0 106330000 3886800 99041000 4868800 150330000 2949300 184450000 173260000 17231000 221410000 211060000 282460000 19910 213 18133 166990;166991;166992;166993;166994;166995;166996;166997;166998;166999;167000;167001;167002;167003;167004;167005;167006;167007;167008;167009 133031;133032;133033;133034;133035;133036;133037;133038;133039;133040;133041;133042;133043;133044;133045;133046;133047;133048;133049 133031 18 GPPPSWASEPERPSILSASELK Unmodified 2334.1856 0.18557552 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 1 By MS/MS By MS/MS By matching By matching 10 0 4 1 1 1 1 78.141 78.276 3 0.00017075 90010 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 42.309 33.708 32808000 0 0 0 0 0 0 0 9854500 7361600 11894000 0 0 3697300 0 0 19911 5216 18134 167010;167011;167012;167013 133050;133051 133050 1 GPPPTDPYGRPPPYDR Unmodified 1780.8533 0.85328277 2620 Q16630 CPSF6 Cleavage and polyadenylation specificity factor subunit 6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 2 1 1 1 1 1 1 1 1 1 1 1 45.102 45.217 3 0.0011694 51448 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 50.155 35.46 195830000 0 0 0 14643000 12102000 18457000 12361000 11200000 10159000 14407000 18597000 30793000 16281000 16139000 20695000 19912 2620 18135 167014;167015;167016;167017;167018;167019;167020;167021;167022;167023;167024;167025;167026 133052;133053;133054;133055;133056;133057;133058;133059;133060;133061;133062;133063 133063 6 GPPPTDPYGRPPPYDRGDYGPPGR Unmodified 2580.2146 0.21458424 2620 Q16630 CPSF6 Cleavage and polyadenylation specificity factor subunit 6 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 2 1 1 1 1 54.566 54.718 4 6.1037E-22 62004 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 90.316 78.12 258550000 0 0 0 13448000 10602000 19164000 16257000 16578000 15857000 0 31999000 32653000 24199000 29158000 48633000 19913 2620 18136 167027;167028;167029;167030;167031;167032;167033;167034;167035;167036;167037;167038 133064;133065;133066;133067;133068;133069;133070;133071;133072;133073;133074;133075;133076;133077;133078;133079;133080;133081 133065 18 GPPPTTEEEASGPPGEPR Unmodified 1803.8275 0.82752153 3968 Q96RK0 CIC Protein capicua homolog yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 35.74 35.514 2 0.0068338 39425 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 37.426 30.766 5611800 0 0 0 0 2215000 3396900 0 0 0 0 0 0 0 0 0 19914 3968 18137 167039;167040 133082 133082 1 GPPQEEEEEEDEEEEATK Unmodified 2102.8288 0.8287629 1674 P51858 HDGF Hepatoma-derived growth factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 1 1 1 1 1 1 2 2 2 2 3 31.924 32.206 2;3 8.2823E-164 34584 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 236.92 236.92 464130000 0 0 0 9545200 10496000 12461000 12444000 12722000 9039000 11686000 74488000 48809000 14303000 38913000 209220000 19915 1674 18138 167041;167042;167043;167044;167045;167046;167047;167048;167049;167050;167051;167052;167053;167054;167055;167056;167057;167058 133083;133084;133085;133086;133087;133088;133089;133090;133091;133092;133093;133094;133095;133096;133097;133098;133099;133100 133097 15 GPPQEEEEEEDEEEEATKEDAEAPGIRDHESL Unmodified 3622.5191 0.51906266 1674 P51858 HDGF Hepatoma-derived growth factor yes yes 0 0 2 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 62.408 60.005 4 7.1904E-21 68600 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.156 54.241 41417000 26527000 0 0 0 0 0 0 0 0 0 0 5827300 0 0 9062200 19916 1674 18139 167059;167060;167061 133101;133102 133101 2 GPPQSPVFEGVYNNSR Unmodified 1746.8325 0.83254733 3576 Q8WWM7 ATXN2L Ataxin-2-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 66.839 66.988 2 6.6421E-28 76803 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 142.07 127.91 88562000 0 0 0 0 5623000 5504000 0 0 6071200 9703900 11805000 12109000 9793100 9384200 18569000 19917 3576 18140 167062;167063;167064;167065;167066;167067;167068;167069;167070;167071;167072 133103;133104;133105;133106;133107;133108;133109;133110;133111;133112;133113;133114 133113 12 GPPRGGPGGELPR Unmodified 1245.6578 0.65781785 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.382 27.568 3 8.6305E-07 29824 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 78.529 42.082 856610000 0 0 0 38790000 48871000 73264000 63715000 55173000 56785000 83753000 106390000 138920000 88243000 0 102710000 19918 2102 18141 167073;167074;167075;167076;167077;167078;167079;167080;167081;167082;167083;167084 133115;133116;133117;133118;133119;133120;133121;133122;133123;133124;133125;133126 133124 7 GPPRGGPGGELPRGPAGLGPR Unmodified 1951.05 0.050025516 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 2 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 51.39 51.657 4 0.0061923 58190 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 36.481 16.113 72817000 0 0 0 0 0 11927000 0 15317000 0 11806000 0 16121000 9012000 8633500 0 19919 2102 18142 167085;167086;167087;167088;167089;167090 133127;133128 133127 1 GPPRNYQQNYQNSESGEK Unmodified 2094.9355 0.93550885 1955 P67809 YBX1 Nuclease-sensitive element-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.938 20.141 3 2.2112E-05 20265 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 67.685 62.475 73153000 0 0 0 3883100 4085300 5420500 6252000 4292500 6814300 6510300 9802600 8700200 7217600 3698200 6476700 19920 1955 18143 167091;167092;167093;167094;167095;167096;167097;167098;167099;167100;167101;167102 133129;133130;133131;133132;133133;133134;133135;133136;133137;133138 133136 10 GPPRPRPAPAVGEAEDK Unmodified 1742.9064 0.90638097 1044 P16989 YBX3 Y-box-binding protein 3 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 2 2 2 1 2 1 2 25.393 25.568 3;4 1.0171E-55 27069 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 150.39 131.15 1265900000 0 0 0 84392000 103530000 105240000 107740000 107430000 89882000 94283000 105190000 56418000 161260000 75090000 175410000 19921 1044 18144 167103;167104;167105;167106;167107;167108;167109;167110;167111;167112;167113;167114;167115;167116;167117;167118;167119;167120;167121;167122;167123;167124 133139;133140;133141;133142;133143;133144;133145;133146;133147;133148;133149;133150;133151;133152;133153;133154 133142 7 GPPSSVPK Unmodified 767.41775 0.41775372 664 O95466 FMNL1 Formin-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 14.693 14.833 2 0.013906 13985 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 71.342 13.175 154220000 0 0 0 12753000 7347700 12692000 10934000 9652300 8162600 18359000 20797000 19783000 17446000 16295000 0 19922 664 18145 167125;167126;167127;167128;167129;167130;167131;167132;167133;167134;167135 133155;133156;133157;133158;133159;133160 133157 6 GPPSTPVPTQTQNPESR Unmodified 1791.8751 0.87514042 457 O75128 COBL Protein cordon-bleu yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.739 39.918 2 2.5102E-32 44167 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 146.36 140.12 104630000 0 0 0 5384500 5485900 7444900 6518900 7748500 6696700 10802000 11549000 13786000 8644100 6511800 14061000 19923 457 18146 167136;167137;167138;167139;167140;167141;167142;167143;167144;167145;167146;167147 133161;133162;133163;133164;133165;133166;133167;133168;133169;133170;133171;133172 133166 12 GPPVFTQEERYK Unmodified 1449.7252 0.72522871 4009 Q99447 PCYT2 Ethanolamine-phosphate cytidylyltransferase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 2 2 2 49.975 44.244 2;3 3.9758E-06 60875 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 111.63 89.575 165330000 100220000 20366000 44741000 0 0 0 0 0 0 0 0 0 0 0 0 19924 4009 18147 167148;167149;167150;167151;167152;167153 133173;133174;133175;133176;133177 133175 5 GPPVPPPPK Unmodified 884.51199 0.51198846 162 O00499 BIN1 Myc box-dependent-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 32.92 32.701 2 0.011503 34747 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.717 29.025 96844000 0 35229000 0 3348000 2165900 0 4138100 4802400 3268500 6876100 8300700 8281400 5784500 4442200 10208000 19925 162 18148 167154;167155;167156;167157;167158;167159;167160;167161;167162;167163;167164;167165 133178;133179;133180;133181;133182;133183;133184;133185;133186;133187 133181 10 GPPVSSLSLASLNTGDNESVHSGK Unmodified 2352.1557 0.15573196 2164 Q08AD1 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 73.31 73.356 3 7.9766E-35 84698 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 99.11 86.073 160680000 0 0 0 8618800 11185000 14603000 13103000 11100000 10328000 22999000 17099000 0 12024000 19120000 20500000 19926 2164 18149 167166;167167;167168;167169;167170;167171;167172;167173;167174;167175;167176 133188;133189;133190;133191;133192;133193;133194;133195;133196;133197;133198;133199;133200;133201;133202 133202 15 GPPVTPSSEK Unmodified 997.50803 0.50802529 3094 Q7Z460 CLASP1 CLIP-associating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 15.495 15.635 2 0.0016584 15246 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 94.309 60.306 212810000 0 0 0 13737000 13861000 13592000 16714000 15585000 0 18672000 29838000 34291000 30977000 25541000 0 19927 3094 18150 167177;167178;167179;167180;167181;167182;167183;167184;167185;167186 133203;133204;133205;133206;133207;133208;133209;133210 133207 6 GPQEVAVYVQELQK Unmodified 1586.8304 0.83042206 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 4 2 4 2 82.915 79.421 2;3 7.4671E-34 98669 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 154.36 122.72 223470000 0 216350000 7117600 0 0 0 0 0 0 0 0 0 0 0 0 19928 2495 18151 167187;167188;167189;167190;167191;167192 133211;133212;133213;133214;133215;133216 133211 5 GPQEVGPQGPAVPSGGGR Unmodified 1645.8172 0.81723161 3559 Q8WVB6 CHTF18 Chromosome transmission fidelity protein 18 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.097 41.275 2 9.3838E-33 46094 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 147.18 123.95 122350000 0 0 0 5358300 5080200 12991000 8504300 8789100 6916500 10767000 9235400 19043000 10376000 7850400 17439000 19929 3559 18152 167193;167194;167195;167196;167197;167198;167199;167200;167201;167202;167203;167204 133217;133218;133219;133220;133221;133222;133223;133224;133225;133226;133227 133225 11 GPQEVGPQGPAVPSGGGRR Unmodified 1801.9183 0.91834264 3559 Q8WVB6 CHTF18 Chromosome transmission fidelity protein 18 homolog yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By matching 10 0 5 1 1 1 1 1 34.744 34.756 3 0.028785 38339 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 21.045 9.6702 10534000 0 0 0 0 1330100 0 1507300 2179100 2098900 3418300 0 0 0 0 0 19930 3559 18153 167205;167206;167207;167208;167209 133228 133228 1 GPQHPPPPSGPEEPGEK Unmodified 1735.8166 0.81656291 4630 Q9NSV4 DIAPH3 Protein diaphanous homolog 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.59 1.65 1 16 1 1 1 1 1 1 1 2 1 2 1 2 2 25.934 25.918 3 3.8067E-25 27739 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 107.63 97.535 320290000 0 3199000 0 15808000 21431000 36526000 20441000 20825000 24019000 28351000 28959000 39669000 20853000 23082000 37132000 19931 4630 18154 167210;167211;167212;167213;167214;167215;167216;167217;167218;167219;167220;167221;167222;167223;167224;167225;167226 133229;133230;133231;133232;133233;133234;133235;133236;133237;133238;133239;133240;133241;133242;133243;133244;133245;133246;133247;133248;133249;133250 133239 21 GPQIDVNVPK Unmodified 1065.5819 0.58185893 3226 Q8IVF2 AHNAK2 Protein AHNAK2 yes yes 0 0 0 By MS/MS 2 0 1 1 58.392 52.561 2 0.020507 67694 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.42 38.526 20395000 0 20395000 0 0 0 0 0 0 0 0 0 0 0 0 0 19932 3226 18155 167227 133251 133251 1 GPQITGPSLEGDLGLK Unmodified 1580.841 0.84098675 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 80.286 79.634 2 3.8086E-58 94770 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 174.84 156.97 916310000 0 414830000 3439700 13640000 27917000 27287000 27223000 45391000 36885000 50929000 34250000 63007000 55912000 38783000 76813000 19933 2172 18156 167228;167229;167230;167231;167232;167233;167234;167235;167236;167237;167238;167239;167240;167241;167242 133252;133253;133254;133255;133256;133257;133258;133259;133260;133261;133262;133263;133264;133265;133266;133267;133268 133259 17 GPQLFHMDPSGTFVQCDAR Oxidation (M) 2177.9623 0.96225765 1228 P28066 PSMA5 Proteasome subunit alpha type-5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 2 1 2 2 67.944 67.458 2;3 6.3107E-85 76710 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 177.6 173.43 537600000 59007000 0 0 0 0 48670000 0 0 0 34502000 79256000 90338000 26834000 46702000 152290000 19934 1228 18157 167243;167244;167245;167246;167247;167248;167249;167250;167251;167252;167253 133269;133270;133271;133272;133273;133274;133275;133276;133277;133278 133271 1816 10 GPQLFHMDPSGTFVQCDAR Unmodified 2161.9673 0.96734302 1228 P28066 PSMA5 Proteasome subunit alpha type-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 2 78.095 78.26 2;3 7.6188E-17 90037 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 101.61 95.885 181590000 0 0 0 0 0 7181300 0 5099400 0 7174700 8740500 14486000 0 15068000 123840000 19935 1228 18157 167254;167255;167256;167257;167258;167259;167260;167261 133279;133280;133281;133282;133283;133284;133285;133286 133281 7 GPQNAFFLVK Unmodified 1119.6077 0.60767976 1235 P28347 TEAD1 Transcriptional enhancer factor TEF-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 78.495 77.373 2 2.1147E-16 89322 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 167.24 150.77 441610000 45435000 19370000 4985000 14492000 21869000 28651000 21019000 30032000 21392000 34628000 29780000 34670000 29617000 36104000 69564000 19936 1235 18158 167262;167263;167264;167265;167266;167267;167268;167269;167270;167271;167272;167273;167274;167275;167276;167277 133287;133288;133289;133290;133291;133292;133293;133294;133295;133296;133297;133298;133299;133300;133301;133302;133303 133288 17 GPQNATDSYVHK Unmodified 1315.6157 0.61567826 349 O43660 PLRG1 Pleiotropic regulator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.71 1.4 1 23 1 2 2 1 2 2 2 2 2 2 2 2 2 18.653 18.687 2;3 0.0067101 18575 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 62.823 41.953 375440000 0 193490000 0 13333000 13953000 12430000 14293000 10953000 10367000 16930000 11659000 22879000 13313000 11248000 30587000 19937 349 18159 167278;167279;167280;167281;167282;167283;167284;167285;167286;167287;167288;167289;167290;167291;167292;167293;167294;167295;167296;167297;167298;167299;167300;167301 133304;133305;133306;133307;133308;133309 133309 5 GPQPGPSASSLLSQFR Unmodified 1627.8318 0.83181904 4999 Q9ULL5 PRR12 Proline-rich protein 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 81.951 82.004 2 2.0399E-08 94819 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 90.926 82.413 48171000 0 0 0 1065000 2435500 0 3040600 4481800 0 6976500 4614500 5523000 3558700 4025300 12450000 19938 4999 18160 167302;167303;167304;167305;167306;167307;167308;167309;167310;167311 133310;133311;133312;133313;133314;133315;133316;133317;133318 133314 9 GPQSNYGGPYPAAPTFGSQPGPPQPLPPK Unmodified 2903.4242 0.42424267 1729 P53992 SEC24C Protein transport protein Sec24C yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 79.706 79.801 3 0.038989 92317 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 16.447 13.719 51557000 0 0 0 0 3791800 4374800 2555200 0 3262600 5569100 5993000 7003200 4909800 4443500 9654200 19939 1729 18161 167312;167313;167314;167315;167316;167317;167318;167319;167320;167321 133319 133319 1 GPQVQQPPPSNR Unmodified 1303.6633 0.66329715 2536 Q15436 SEC23A Protein transport protein Sec23A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 18.112 18.34 2 0.00050317 16803 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 94.692 88.911 24616000 0 0 0 1833500 0 3180200 2964700 2123400 0 2478900 2365300 3036700 0 2060100 4573300 19940 2536 18162 167322;167323;167324;167325;167326;167327;167328;167329;167330;167331 133320;133321;133322;133323;133324;133325;133326;133327;133328 133325 9 GPQVSGELK Unmodified 913.4869 0.48689592 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 27.068 22.83 2 0.011428 23301 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 107.29 19.266 49388000 0 49388000 0 0 0 0 0 0 0 0 0 0 0 0 0 19941 2172 18163 167332;167333;167334;167335;167336;167337;167338;167339;167340 133329;133330;133331;133332;133333;133334;133335;133336;133337 133335 8 GPQVSSALNLDTSK Unmodified 1415.7256 0.72562264 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 55.888 55.635 2 1.6679E-22 64247 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 174.84 160.16 293750000 0 6678200 0 13312000 16434000 16268000 24448000 23093000 19505000 27377000 25228000 32686000 28273000 23503000 36946000 19942 2172 18164 167341;167342;167343;167344;167345;167346;167347;167348;167349;167350;167351;167352;167353 133338;133339;133340;133341;133342;133343;133344;133345;133346;133347;133348;133349;133350;133351;133352 133351 15 GPQYGTLEK Unmodified 991.49746 0.4974606 4974 Q9UKS6 PACSIN3 Protein kinase C and casein kinase substrate in neurons protein 3 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 30.111 25.716 2 1.6432E-06 33505 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 164.57 94.299 218200000 0 218200000 0 0 0 0 0 0 0 0 0 0 0 0 0 19943 4974 18165 167354;167355 133353;133354;133355 133353 2 GPQYGTVEK Unmodified 977.48181 0.48181054 5030 Q9UNF0 PACSIN2 Protein kinase C and casein kinase substrate in neurons protein 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17.939 17.283 2 0.003237 17728 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 90.709 64.107 327980000 22403000 207780000 1952400 5872200 3925800 7448200 5494500 5033700 4316900 8983100 0 14195000 10008000 8560600 22010000 19944 5030 18166 167356;167357;167358;167359;167360;167361;167362;167363;167364;167365;167366;167367;167368;167369;167370 133356;133357;133358;133359;133360;133361;133362;133363;133364;133365;133366;133367 133357 10 GPREPGPAGRGDGDSGR Unmodified 1636.7666 0.76659303 1802 P58107 EPPK1 Epiplakin yes no 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 7.0972 7.2208 3;4 1.1201E-30 5317 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 122.01 97.074 506820000 0 0 0 28315000 21400000 31331000 28915000 25686000 27886000 45544000 71412000 90783000 49999000 28211000 57333000 19945 1802 18167 167371;167372;167373;167374;167375;167376;167377;167378;167379;167380;167381;167382;167383;167384;167385;167386;167387;167388;167389;167390;167391;167392;167393;167394 133368;133369;133370;133371;133372;133373;133374;133375;133376;133377;133378;133379;133380;133381;133382;133383;133384 133374 13 GPRLDFEGPDAK Unmodified 1300.6412 0.64116473 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 1 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 48.011 47.281 3 0.00016951 51964 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.295 56.565 222100000 30942000 0 15043000 0 7349600 12161000 14467000 17444000 14921000 12939000 13052000 17005000 23424000 17636000 25721000 19946 2172 18168 167395;167396;167397;167398;167399;167400;167401;167402;167403;167404;167405;167406;167407 133385;133386;133387;133388;133389;133390;133391;133392;133393;133394 133388 8 GPRPIREAGEQGDIEPR Unmodified 1875.9551 0.95512208 2263 Q13283 G3BP1 Ras GTPase-activating protein-binding protein 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 30.19 30.378 3;4 3.0595E-07 32492 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.532 63.951 662740000 0 0 0 43351000 32394000 57534000 58803000 44736000 39687000 60844000 50183000 87803000 58082000 48396000 80931000 19947 2263 18169 167408;167409;167410;167411;167412;167413;167414;167415;167416;167417;167418;167419;167420;167421;167422;167423;167424;167425;167426;167427;167428;167429;167430;167431 133395;133396;133397;133398;133399;133400;133401;133402;133403;133404;133405;133406;133407;133408;133409;133410;133411;133412;133413;133414 133409 17 GPSAAGEQEPDK Unmodified 1184.5309 0.53094558 1631 P50579 METAP2 Methionine aminopeptidase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.87 3.56 1 2 1 11 2 2 1 1 1 1 1 1 1 1 1 1 1 16.209 15.943 2 0 92621 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 315.91 260.38 296110000 86628000 18335000 0 14292000 8574500 16576000 15483000 11123000 8908200 17900000 0 30168000 16468000 17462000 34191000 19948 1631 18170 167432;167433;167434;167435;167436;167437;167438;167439;167440;167441;167442;167443;167444;167445;167446 133415;133416;133417;133418;133419;133420;133421;133422;133423;133424;133425;133426;133427;133428 133421 14 GPSAAGEQEPDKESGASVDEVAR Unmodified 2285.0408 0.04076178 1631 P50579 METAP2 Methionine aminopeptidase 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 35.091 35.286 3 6.8927E-34 38913 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 100.94 90.543 33776000 0 0 0 0 3435000 0 8937900 5708700 0 0 8683400 7011100 0 0 0 19949 1631 18171 167447;167448;167449;167450;167451 133429;133430;133431;133432;133433;133434;133435 133430 7 GPSADLLEDLSESR Unmodified 1487.7104 0.71036651 3685 Q92908 GATA6 Transcription factor GATA-6 yes yes 0 0 0 By MS/MS 10 0 1 1 81.26 81.413 2 0.0040813 94357 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 66.492 53.915 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19950 3685 18172 167452 133436 133436 1 GPSFNQER Unmodified 933.43044 0.43044367 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.915 17.095 2 0.0058445 17359 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 137.18 125.03 308950000 0 0 0 16158000 19743000 17255000 22782000 19187000 20467000 22750000 29185000 43821000 30551000 29011000 38036000 19951 5216 18173 167453;167454;167455;167456;167457;167458;167459;167460;167461;167462;167463;167464 133437;133438;133439;133440;133441;133442;133443;133444;133445;133446;133447;133448 133448 7 GPSFNQERGTSSHLPPPPK Unmodified 2032.0126 0.012636957 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 1 By MS/MS 2 0 1 1 49.434 41.609 3 0.011233 57551 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 33.769 25.275 8423100 8423100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19952 5216 18174 167465 133449 133449 1 GPSFPEPLREEQDLER Unmodified 1897.917 0.91700524 816 P06132 UROD Uroporphyrinogen decarboxylase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 2 1 1 1 1 70.5 70.714 3 3.6423E-05 80974 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.641 76.445 87359000 0 0 0 0 0 3308600 0 3957400 3902200 0 9334400 12355000 0 8661800 45840000 19953 816 18175 167466;167467;167468;167469;167470;167471;167472;167473 133450;133451;133452 133450 2 GPSGCVESLEVTCR Unmodified 1549.6865 0.68647672 1528 P47897 QARS Glutamine--tRNA ligase yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 55.727 50.386 2 0.043308 62188 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 48.741 34.051 64877000 0 64877000 0 0 0 0 0 0 0 0 0 0 0 0 0 19954 1528 18176 167474;167475 133453 133453 1 GPSGCVESLEVTCRRADAGEK Unmodified 2277.0478 0.047778189 1528 P47897 QARS Glutamine--tRNA ligase yes yes 0 0 2 By MS/MS By MS/MS 2 0 4 2 2 50.347 44.389 3;4 3.1687E-09 56123 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 76.768 72.151 76054000 50496000 0 25558000 0 0 0 0 0 0 0 0 0 0 0 0 19955 1528 18177 167476;167477;167478;167479 133454;133455;133456 133455 2 GPSGGGEEPALSQYQR Unmodified 1631.754 0.75396265 4023 Q99567 NUP88 Nuclear pore complex protein Nup88 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 42.164 42.335 2 0.00053835 46345 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 62.14 45.115 27661000 0 0 0 0 0 3305700 5158900 0 2743600 3613800 0 0 8137200 4701900 0 19956 4023 18178 167480;167481;167482;167483;167484;167485 133457;133458;133459;133460;133461;133462 133461 2 GPSGLLVYQGK Unmodified 1117.6132 0.61315906 723 P00387 CYB5R3 NADH-cytochrome b5 reductase 3;NADH-cytochrome b5 reductase 3 membrane-bound form;NADH-cytochrome b5 reductase 3 soluble form yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.689 55.823 2 6.0239E-16 63617 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 164.96 140.03 312550000 0 0 0 17214000 28365000 0 26930000 29793000 19699000 0 39635000 53899000 34190000 27193000 35634000 19957 723 18179 167486;167487;167488;167489;167490;167491;167492;167493;167494;167495;167496;167497 133463;133464;133465;133466;133467;133468;133469;133470;133471;133472;133473;133474 133469 11 GPSGSASSRPGVSATPPK Unmodified 1638.8325 0.83254733 2845 Q66K74 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 22.382 22.881 3 0.049794 22970 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 17.558 5.3922 8616600 0 0 0 0 0 0 0 0 0 0 0 0 3931100 0 4685500 19958 2845 18180 167498;167499 133475 133475 1 GPSGYGFNLHSDK Unmodified 1377.6313 0.63132832 209 O14745 SLC9A3R1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 50.668 44.709 2;3 3.3054E-33 61663 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 189.58 180.25 58926000 30902000 0 28024000 0 0 0 0 0 0 0 0 0 0 0 0 19959 209 18181 167500;167501 133476;133477 133476 2 GPSHSGNPSHGTLGLSGTLGR Unmodified 1987.9824 0.98239946 3198 Q86XN7 PROSER1 Proline and serine-rich protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 2 2 1 2 2 1 2 1 1 2 2 1 43.188 43.294 3;4 7.1168E-21 48370 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 92.913 83.125 341140000 0 0 0 7015900 11686000 20114000 27340000 47864000 0 33137000 20756000 21397000 84450000 44247000 23132000 19960 3198 18182 167502;167503;167504;167505;167506;167507;167508;167509;167510;167511;167512;167513;167514;167515;167516;167517;167518;167519;167520 133478;133479;133480;133481;133482;133483;133484;133485;133486 133483 8 GPSLASLEGEEDK Unmodified 1330.6252 0.62523989 3649 Q92667 AKAP1 A-kinase anchor protein 1, mitochondrial yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 59.553 54.733 2 0.0037477 67497 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 95.573 77.709 5619500 0 5619500 0 0 0 0 0 0 0 0 0 0 0 0 0 19961 3649 18183 167521;167522 133487;133488 133488 1 GPSLDIDTPDVNIEGPEGK Unmodified 1951.9375 0.93746591 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 79.197 78.674 2 0 91270 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 252.08 225.29 419670000 0 173390000 0 7653900 21155000 15269000 12952000 17682000 19445000 22027000 19268000 29187000 21208000 25821000 34613000 19962 2172 18184 167523;167524;167525;167526;167527;167528;167529;167530;167531;167532;167533;167534;167535;167536 133489;133490;133491;133492;133493;133494;133495;133496;133497;133498;133499;133500;133501;133502;133503 133497 15 GPSLNPVLDYDHGSR Unmodified 1625.7798 0.77978347 1473 P43243 MATR3 Matrin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 62.125 62.295 3 0.0027633 70866 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 31.319 25.424 72566000 0 0 0 0 3036300 4878200 3780600 5256200 4537600 7472800 7421300 8576000 8703600 6134900 12769000 19963 1473 18185 167537;167538;167539;167540;167541;167542;167543;167544;167545;167546;167547 133504;133505;133506;133507;133508;133509 133506 6 GPSPFSPVQLHQLR Unmodified 1561.8365 0.83651049 1655 P51531 SMARCA2 Probable global transcription activator SNF2L2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.308 71.381 3 0.0001762 81817 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 79.466 73.562 155700000 0 0 0 8266800 3995900 14102000 8037500 9036300 9072800 11898000 11935000 22706000 11266000 13951000 31433000 19964 1655 18186 167548;167549;167550;167551;167552;167553;167554;167555;167556;167557;167558;167559 133510;133511;133512;133513;133514;133515;133516;133517;133518;133519;133520;133521 133519 11 GPSPSPVGSPASVAQSR Unmodified 1579.7954 0.79543354 183 O14497 ARID1A AT-rich interactive domain-containing protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 43.608 43.575 2 0.0022129 48832 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 47.288 36.458 8462500 0 0 0 0 2080800 0 2893600 0 0 0 0 0 3488100 0 0 19965 183 18187 167560;167561;167562;167563 133522;133523;133524 133523 3 GPSPSSPTPPAAAAPAEQAPR Unmodified 1955.9701 0.97010344 3171 Q86VQ1 GLCCI1 Glucocorticoid-induced transcript 1 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 1 2 2 2 2 2 2 2 2 2 2 2 46.877 47.076 2;3 3.1436E-15 52748 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 70.414 61.23 199150000 0 0 0 7887600 12939000 16569000 13144000 11902000 10589000 16357000 24005000 29982000 19101000 13308000 23370000 19966 3171 18188 167564;167565;167566;167567;167568;167569;167570;167571;167572;167573;167574;167575;167576;167577;167578;167579;167580;167581;167582;167583;167584;167585;167586 133525;133526;133527;133528;133529;133530;133531;133532;133533;133534;133535;133536;133537;133538;133539;133540 133531 15 GPSRASSVTTFTGEPNTCPR Unmodified 2120.9909 0.99091524 1706 P52943 CRIP2 Cysteine-rich protein 2 yes yes 0 0 1 By MS/MS 2 0 1 1 52.16 44.145 3 0.00069339 60954 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 31.067 26.969 5318400 5318400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19967 1706 18189 167587 133541 133541 1 GPSSEGPEEEDGEGFSFK Unmodified 1883.7697 0.76973188 2018 P84157 MXRA7 Matrix-remodeling-associated protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 59.747 58.938 2 8.3278E-15 67364 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 109 106.68 69278000 0 20254000 0 3521200 3790100 4385200 3947300 4468600 3009900 0 5498900 10355000 0 3760500 6287800 19968 2018 18190 167588;167589;167590;167591;167592;167593;167594;167595;167596;167597;167598;167599;167600 133542;133543;133544;133545;133546;133547;133548;133549;133550 133549 9 GPSSSLNTPGSFRR Unmodified 1461.7324 0.73243935 4729 Q9NXR1 NDE1 Nuclear distribution protein nudE homolog 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 36.14 36.268 3 0.0080825 40182 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 33.751 8.557 80348000 0 0 0 5853800 6943000 5841100 6689900 0 6717900 6253100 8576500 10106000 12805000 10562000 0 19969 4729 18191 167601;167602;167603;167604;167605;167606;167607;167608;167609;167610 133551;133552;133553;133554;133555 133551 4 GPSSVEDIK Unmodified 930.46583 0.46582612 830 P06748 NPM1 Nucleophosmin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.85 3.88 1 5 2 12 3 3 2 1 1 1 1 1 1 1 1 1 1 1 1 28.596 28.177 2 0.0012408 28581 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 131.06 86.945 16408000000 392650000 7445400000 59454000 499850000 428170000 365100000 479860000 457000000 336390000 568810000 1126300000 1075900000 861620000 755500000 1555600000 19970 830 18192 167611;167612;167613;167614;167615;167616;167617;167618;167619;167620;167621;167622;167623;167624;167625;167626;167627;167628;167629;167630 133556;133557;133558;133559;133560;133561;133562;133563;133564;133565;133566;133567;133568;133569;133570;133571;133572;133573;133574;133575;133576;133577;133578 133565 21 GPSTVTDLEDTK Unmodified 1261.6038 0.60377617 613 O94973 AP2A2 AP-2 complex subunit alpha-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 40 39.311 2 3.1258E-14 48981 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 167.09 139.08 115580000 0 55272000 0 3484800 5692700 5054800 4465600 3322800 4698100 0 6818500 9648800 0 5922500 11195000 19971 613 18193 167631;167632;167633;167634;167635;167636;167637;167638;167639;167640;167641;167642;167643 133579;133580;133581;133582;133583;133584;133585;133586 133581 8 GPSVDWGK Unmodified 844.40792 0.40791731 2638 Q16851 UGP2 UTP--glucose-1-phosphate uridylyltransferase yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching 9 2.45 1 6 1 1 1 1 1 1 1 34.811 34.451 2 0.0192 41721 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 87.323 49.764 133470000 0 61158000 0 0 0 8722400 4627400 0 3329800 0 19222000 12038000 0 0 24374000 19972 2638 18194 167644;167645;167646;167647;167648;167649;167650 133587;133588;133589;133590 133589 4 GPSVFPLAPCSR Unmodified 1286.6441 0.64414162 749 P01859 IGHG2 Ig gamma-2 chain C region no no 0 0 0 By MS/MS 10 0 1 1 74.4 73.853 2 2.1941E-08 85625 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 134.51 129.73 35650000 0 0 0 35650000 0 0 0 0 0 0 0 0 0 0 0 19973 749 18195 167651 133591 133591 1 GPSVFPLAPSSK Unmodified 1185.6394 0.63937381 748 P01857 IGHG1 Ig gamma-1 chain C region yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.688 69.765 2 0.0015745 80816 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 66.758 48.318 520330000 0 0 0 175600000 17768000 14785000 12707000 136960000 8434800 32448000 33608000 28859000 38809000 7512200 12838000 19974 748 18196 167652;167653;167654;167655;167656;167657;167658;167659;167660;167661;167662;167663 133592;133593;133594;133595;133596;133597;133598;133599;133600 133599 8 GPSVGEVVPNVGPPEGAVTCETPTPR Unmodified 2602.2697 0.26971586 4211 Q9BWH6 RPAP1 RNA polymerase II-associated protein 1 yes yes 0 0 0 By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 77.835 77.945 3 2.3319E-23 90457 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 66.613 63.69 46699000 0 0 0 0 3331100 0 5467500 2986900 0 6448300 4550600 5337000 4308000 5535600 8734200 19975 4211 18197 167664;167665;167666;167667;167668;167669;167670;167671;167672 133601;133602;133603 133603 3 GPSWDPFR Unmodified 960.44537 0.44536545 786 P04792 HSPB1 Heat shock protein beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.257 73.322 2 0.0047759 84435 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 113.7 86.442 173100000 0 0 0 6760000 7276000 16644000 8686800 14827000 9767100 15485000 18023000 14391000 10568000 13574000 37102000 19976 786 18198 167673;167674;167675;167676;167677;167678;167679;167680;167681;167682;167683;167684 133604;133605;133606;133607;133608;133609;133610;133611;133612;133613;133614;133615 133604 12 GPSYEDLYTQNVVINMDDQEDLHRASLEGK Unmodified 3435.5889 0.58887775 1241 P29083 GTF2E1 General transcription factor IIE subunit 1 yes yes 0 0 1 By MS/MS 2 0 1 1 86.376 78.246 4 0.0016909 102022 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 32.075 29.668 11908000 11908000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19977 1241 18199 167685 133616 133616 1 GPSYGEDVSNTTTAQK Unmodified 1653.7482 0.74820857 1253 P29590 PML Protein PML yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.54 29.732 2 2.3253E-84 31145 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 188.91 171.43 110850000 0 0 0 5433400 6054900 6696800 8516900 6938900 6297000 8243100 11551000 14723000 13413000 9763800 13214000 19978 1253 18200 167686;167687;167688;167689;167690;167691;167692;167693;167694;167695;167696;167697 133617;133618;133619;133620;133621;133622;133623;133624;133625;133626;133627;133628 133620 12 GPSYGLSAEVK Unmodified 1106.5608 0.56078914 4008 Q99439;Q15417 CNN2;CNN3 Calponin-2;Calponin-3 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 46.452 45.175 2 5.3063E-09 60664 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 127.4 105.44 1906700000 22132000 1038700000 9968100 37575000 33987000 55137000 61997000 59922000 46309000 83388000 84470000 99915000 61045000 64883000 147260000 19979 4008 18201 167698;167699;167700;167701;167702;167703;167704;167705;167706;167707;167708;167709;167710;167711;167712;167713 133629;133630;133631;133632;133633;133634;133635;133636;133637;133638;133639;133640;133641;133642;133643;133644;133645;133646;133647;133648;133649 133639 21 GPTEADELMK Oxidation (M) 1105.4961 0.49613997 947 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.298 23.502 2 0.0010803 24450 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 104.2 92.979 268270000 0 0 0 12523000 9481600 18771000 15052000 11613000 7885500 18397000 31725000 37434000 16092000 27588000 61712000 19980 947 18202 167714;167715;167716;167717;167718;167719;167720;167721;167722;167723;167724;167725 133650;133651;133652;133653;133654;133655;133656;133657;133658;133659;133660;133661 133658 1227 11 GPTEADELMK Unmodified 1089.5012 0.50122535 947 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.759 39.938 2 0.0013256 42997 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.57 96.353 356450000 0 0 0 12788000 9158400 22395000 14833000 13093000 11079000 21676000 44431000 44036000 16260000 29005000 117700000 19981 947 18202 167726;167727;167728;167729;167730;167731;167732;167733;167734;167735;167736;167737 133662;133663;133664;133665;133666;133667;133668;133669;133670;133671;133672;133673;133674 133665 13 GPTEQLVSPEPEVYEILR Unmodified 2055.0524 0.052436086 532 O75688 PPM1B Protein phosphatase 1B yes yes 0 0 0 By MS/MS 10 0 1 1 88.842 88.985 2 0.0029171 103011 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.252 39.288 2699900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2699900 19982 532 18203 167738 133675 133675 1 GPTISLTQIV Unmodified 1027.5914 0.59136099 2591 Q15904 ATP6AP1 V-type proton ATPase subunit S1 yes yes 0 0 0 By MS/MS 2 0 1 1 92.411 87.5 2 0.0045074 108622 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.296 61.078 20615000 0 20615000 0 0 0 0 0 0 0 0 0 0 0 0 0 19983 2591 18204 167739 133676 133676 1 GPTLELAGTGSR Unmodified 1157.6041 0.60405094 3037 Q76L83 ASXL2 Putative Polycomb group protein ASXL2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 48.33 48.554 2 0.00016643 53612 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.355 26.374 71666000 0 0 0 3562300 0 5955700 5381100 6063000 4972900 5907800 8074400 9233200 6678100 8220600 7617300 19984 3037 18205 167740;167741;167742;167743;167744;167745;167746;167747;167748;167749;167750 133677;133678;133679;133680;133681;133682;133683;133684;133685;133686;133687;133688;133689 133681 13 GPTLTVYK Unmodified 877.49092 0.49091866 2328 Q13616 CUL1 Cullin-1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 42.64 41.31 2 0.0024282 52696 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.25 97.936 534830000 42762000 352790000 11285000 0 0 16402000 9638400 5615700 6410400 12982000 15836000 13563000 10066000 10165000 27315000 19985 2328 18206 167751;167752;167753;167754;167755;167756;167757;167758;167759;167760;167761;167762;167763;167764 133690;133691;133692;133693;133694;133695 133690 6 GPTPAILESLISINNK Unmodified 1665.9301 0.93013611 1454 P42345 MTOR Serine/threonine-protein kinase mTOR yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 94.49 94.623 2 0.0028398 109780 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.592 40.489 2630200 0 0 0 0 0 0 0 0 0 1080200 0 0 0 0 1550000 19986 1454 18207 167765;167766 133696;133697 133696 2 GPTPEEAIQK Unmodified 1068.5451 0.54513908 4241 Q9BY43 CHMP4A Charged multivesicular body protein 4a yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 28.198 28.53 2 0.0084468 29522 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 60.019 44.868 10532000 0 0 0 0 0 0 0 0 0 0 0 0 3942000 6589900 0 19987 4241 18208 167767;167768 133698 133698 1 GPTPFNQNQLHQLR Unmodified 1648.8434 0.84338678 1656 P51532 SMARCA4 Transcription activator BRG1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 55.277 55.329 3 2.6269E-22 63518 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 126.1 113.61 295170000 0 0 0 21370000 18658000 33472000 27578000 25359000 21711000 34100000 0 0 35428000 30813000 46678000 19988 1656 18209 167769;167770;167771;167772;167773;167774;167775;167776;167777;167778 133699;133700;133701;133702;133703;133704;133705;133706;133707;133708;133709 133708 11 GPTPGQAPAGGAGAEGK Unmodified 1421.6899 0.68990583 3938 Q96NU1 SAMD11 Sterile alpha motif domain-containing protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.057 19.253 2 2.2064E-31 18358 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 135.58 116.31 230320000 0 0 0 20527000 13816000 16198000 15399000 15697000 12502000 22488000 22258000 25759000 20376000 16111000 29193000 19989 3938 18210 167779;167780;167781;167782;167783;167784;167785;167786;167787;167788;167789;167790 133710;133711;133712;133713;133714;133715;133716;133717;133718;133719;133720;133721 133714 12 GPTPPLPSAPLAPEK Unmodified 1470.8082 0.80823006 2453 Q14865 ARID5B AT-rich interactive domain-containing protein 5B yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 72.288 72.534 2 0.0010493 83530 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 72.531 56.916 29833000 0 0 0 0 0 0 5900400 0 0 4207700 7430900 7571800 0 0 4722600 19990 2453 18211 167791;167792;167793;167794;167795;167796;167797 133722;133723;133724;133725 133724 4 GPTQPPPPHVSIK Unmodified 1353.7405 0.74048484 3657 Q92766 RREB1 Ras-responsive element-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 39.607 39.293 3 0.0094097 44060 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 53.869 45.124 45593000 0 0 0 14770000 14910000 15914000 0 0 0 0 0 0 0 0 0 19991 3657 18212 167798;167799;167800 133726;133727 133727 0 GPTSAELLNR Unmodified 1056.5564 0.55637247 3572 Q8WWH5 TRUB1 Probable tRNA pseudouridine synthase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.001 40.181 2 5.0268E-05 45214 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 144.12 105.33 146780000 0 0 0 8921100 8536600 15763000 11419000 10168000 7896100 15030000 13956000 12532000 14021000 11568000 16972000 19992 3572 18213 167801;167802;167803;167804;167805;167806;167807;167808;167809;167810;167811;167812 133728;133729;133730;133731;133732;133733;133734;133735;133736;133737;133738;133739;133740;133741 133741 13 GPTSAELLNRLK Unmodified 1297.7354 0.73539946 3572 Q8WWH5 TRUB1 Probable tRNA pseudouridine synthase 1 yes yes 0 0 1 By MS/MS 2 0 1 1 72.395 64.156 3 0.033451 85243 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.044 12.387 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19993 3572 18214 167813 133742 133742 1 GPTSQESQLNAMK Unmodified 1389.6558 0.65582851 3775 Q96CB8 INTS12 Integrator complex subunit 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 33.792 33.45 2 0.0001506 36606 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 84.17 59.315 62733000 0 16042000 0 3553700 3713700 3784100 3690100 3908000 3455500 6118300 7515300 0 0 4242300 6711000 19994 3775 18215 167814;167815;167816;167817;167818;167819;167820;167821;167822;167823;167824 133743;133744;133745;133746;133747;133748;133749;133750;133751;133752;133753 133748 11 GPTSTSIDNIDGTPVRDER Unmodified 2028.9712 0.97122565 2810 Q5VT52 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 2 2 1 2 1 2 1 1 2 2 2 1 48.481 48.605 3 5.6757E-16 54618 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 109.87 92.724 1380400000 0 0 0 83654000 118890000 77090000 142100000 106650000 96209000 83024000 127710000 154550000 153550000 116080000 120890000 19995 2810 18216 167825;167826;167827;167828;167829;167830;167831;167832;167833;167834;167835;167836;167837;167838;167839;167840;167841;167842;167843 133754;133755;133756;133757;133758;133759;133760;133761;133762;133763;133764;133765;133766;133767;133768;133769;133770;133771;133772 133759 18 GPTVGGGLPGIGVQGLEGNLQMPGIK Oxidation (M) 2461.2999 0.29989378 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 87.413 87.552 3 1.2876E-15 101265 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.413 59.839 19987000 0 0 0 0 0 0 0 2964700 0 4694100 0 0 0 1182900 11145000 19996 2172 18217 167844;167845;167846;167847 133773;133774 133774 3508 2 GPTVPYYEK Unmodified 1052.5179 0.51786169 2301 Q13495 MAMLD1 Mastermind-like domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 42.616 42.267 2 0.0071283 47391 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 73.248 51.117 146220000 0 33759000 0 10339000 9137300 9908100 9891400 11886000 10853000 9116500 11552000 12439000 10461000 6873600 0 19997 2301 18218 167848;167849;167850;167851;167852;167853;167854;167855;167856;167857;167858;167859;167860 133775;133776;133777;133778;133779;133780;133781;133782;133783;133784;133785;133786;133787;133788;133789 133778 15 GPVAVTGASTPEGTAPPPPAAPAPPK Unmodified 2334.222 0.22196103 4340 Q9H0W8 SMG9 Protein SMG9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 64.302 64.561 3 1.7239E-13 73386 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.225 55.83 44389000 0 0 0 0 0 6670700 0 0 0 6766900 6904400 5922600 4020000 3982800 10122000 19998 4340 18219 167861;167862;167863;167864;167865;167866;167867 133790;133791;133792;133793 133791 4 GPVEGYEENEEFLR Unmodified 1666.7475 0.74748029 4920 Q9UI30 TRMT112 Multifunctional methyltransferase subunit TRM112-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.779 66.862 2 1.9092E-26 75851 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 175.91 161.03 550610000 0 0 0 31147000 34802000 50197000 28174000 43630000 28406000 59206000 50889000 58509000 39460000 40220000 85970000 19999 4920 18220 167868;167869;167870;167871;167872;167873;167874;167875;167876;167877;167878;167879 133794;133795;133796;133797;133798;133799;133800;133801;133802;133803;133804;133805;133806 133797 13 GPVFAPPYEPLPENVK Unmodified 1752.9087 0.90867238 945 P11387 TOP1 DNA topoisomerase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 3 1 1 1 1 1 1 1 1 1 1 1 1 1 82.779 81.873 2;3 9.8197E-05 101365 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.56 96.505 453170000 0 298530000 2463900 6940700 8580100 10131000 12475000 11497000 10074000 15012000 15809000 19963000 7699800 11107000 22887000 20000 945 18221 167880;167881;167882;167883;167884;167885;167886;167887;167888;167889;167890;167891;167892;167893;167894;167895 133807;133808;133809;133810;133811;133812;133813;133814;133815;133816;133817;133818;133819;133820;133821 133810 15 GPVGGSDAAPQR Unmodified 1110.5418 0.54178503 3511 Q8TE04 PANK1 Pantothenate kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 14.452 14.574 2 3.534E-09 13916 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 142.92 121.46 130710000 0 0 0 18334000 23482000 27384000 0 0 0 12995000 17655000 30859000 0 0 0 20001 3511 18222 167896;167897;167898;167899;167900;167901 133822;133823;133824;133825;133826;133827 133827 6 GPVGLEGLLTTK Unmodified 1183.6812 0.68123863 1749 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 81.205 81.259 2 2.7515E-05 93143 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 96.143 82.765 89077000 0 0 0 0 7432400 10515000 0 0 0 16783000 0 16969000 0 11792000 25586000 20002 1749 18223 167902;167903;167904;167905;167906;167907;167908;167909;167910;167911 133828;133829;133830;133831;133832;133833;133834;133835;133836;133837 133835 10 GPVGTVSEAQLAR Unmodified 1283.6834 0.68336389 4773 Q9NZM1 MYOF Myoferlin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 47.19 47.411 2 2.8683E-08 52392 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 107.21 85.119 38753000 0 0 0 4942700 0 0 0 4061900 0 0 8059600 0 8383500 6620500 6685100 20003 4773 18224 167912;167913;167914;167915;167916;167917;167918;167919;167920 133838;133839;133840;133841;133842;133843;133844;133845;133846 133843 9 GPVKPTGGPGGGGTQTQQQMNQLK Unmodified 2365.1808 0.18084127 1199 P26196 DDX6 Probable ATP-dependent RNA helicase DDX6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.169 37.349 3 1.7776E-77 40273 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 137.12 125.08 159080000 0 0 0 8059700 8311600 10528000 9699300 10113000 5702500 20598000 12994000 22049000 13370000 12220000 25437000 20004 1199 18225 167921;167922;167923;167924;167925;167926;167927;167928;167929;167930;167931;167932 133847;133848;133849;133850;133851;133852;133853;133854;133855;133856;133857;133858 133850 12 GPVKPTGGPGGGGTQTQQQMNQLK Oxidation (M) 2381.1758 0.17575589 1199 P26196 DDX6 Probable ATP-dependent RNA helicase DDX6 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 26.293 26.432 3 1.2357E-05 28066 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 40.622 28.976 15348000 0 0 0 3943300 0 0 0 3249300 2418900 0 5736800 0 0 0 0 20005 1199 18225 167933;167934;167935;167936 133859 133859 1746 1 GPVNSCQGK Unmodified 945.43381 0.43381449 28 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 5.7848 2.4839 2 0.0055857 4479 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.46 69.669 122470000 0 122470000 0 0 0 0 0 0 0 0 0 0 0 0 0 20006 28 18226 167937;167938 133860 133860 1 GPVNYNVTTEFEK Unmodified 1496.7147 0.7147236 3265 Q8IXQ4 GPALPP1 GPALPP motifs-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.3 2.1 1 9 1 1 1 1 1 1 1 1 1 1 65.755 65.521 2 3.9226E-08 79541 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 125.74 115.51 77695000 0 16186000 0 0 0 0 4323400 5690100 3682400 5021100 8921800 9904900 5028800 8207400 10729000 20007 3265 18227 167939;167940;167941;167942;167943;167944;167945;167946;167947;167948 133861;133862;133863;133864;133865;133866;133867;133868;133869;133870;133871 133867 11 GPVPAKPTVLFEK Unmodified 1381.7969 0.79693709 2845 Q66K74 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 62.613 62.716 3 0.0050981 72051 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 35.487 32.626 87117000 0 0 0 7226000 6327800 0 0 6577500 3844100 11486000 10604000 13442000 7437200 9435000 10737000 20008 2845 18228 167949;167950;167951;167952;167953;167954;167955;167956;167957;167958 133872;133873;133874;133875;133876 133875 5 GPVPTFQPFQR Unmodified 1272.6615 0.66150624 1075 P18615 NELFE Negative elongation factor E yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 75.59 75.35 2 0.0020286 87601 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 69.598 54.447 93442000 0 0 0 22807000 23032000 0 47603000 0 0 0 0 0 0 0 0 20009 1075 18229 167959;167960;167961 133877 133877 1 GPVREGDVLTLLESER Unmodified 1768.9319 0.93192702 1919 P62857 RPS28 40S ribosomal protein S28 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 82.737 82.885 3 4.768E-06 95523 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.507 54.004 41298000 0 0 0 0 0 1994800 0 1017700 1661700 2207000 1884300 2347600 0 0 30185000 20010 1919 18230 167962;167963;167964;167965;167966;167967;167968 133878;133879;133880;133881;133882 133880 5 GPVSFQK Unmodified 761.40719 0.40718903 478 O75330 HMMR Hyaluronan mediated motility receptor yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 28.88 24.534 2 0.031292 30682 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 89.903 38.866 25661000 0 25661000 0 0 0 0 0 0 0 0 0 0 0 0 0 20011 478 18231 167969;167970 133883 133883 1 GPVSGTEPEPVYSMEAADYR Unmodified 2153.9575 0.95754942 2399 Q14247 CTTN Src substrate cortactin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 2 1 1 1 1 2 2 1 1 2 2 72.646 72.758 2;3 5.6709E-59 83807 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 169.04 163.32 101610000 0 0 0 0 8639000 4037900 3526400 4487800 3551800 13558000 14644000 9363700 4100100 8942600 26756000 20012 2399 18232 167971;167972;167973;167974;167975;167976;167977;167978;167979;167980;167981;167982;167983;167984;167985;167986 133884;133885;133886;133887;133888;133889;133890;133891;133892;133893;133894;133895;133896 133888 13 GPVSGTEPEPVYSMEAADYR Oxidation (M) 2169.9525 0.95246405 2399 Q14247 CTTN Src substrate cortactin yes yes 0 1 0 By matching By MS/MS By matching By matching By matching 10 0 5 1 1 1 1 1 59.938 60.034 2 0.00050329 68194 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 44.616 39.814 20047000 0 0 0 0 3906900 0 4063400 0 0 0 0 5161700 3364400 3550900 0 20013 2399 18232 167987;167988;167989;167990;167991 133897 133897 3932 1 GPVSPLVR Unmodified 823.49159 0.49158736 4908 Q9UHR6 ZNHIT2 Zinc finger HIT domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 39.37 39.56 2 0.038617 42711 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 50.966 25.139 58882000 0 0 0 3675100 3833900 4156700 0 4640500 2444300 8424700 7430800 5522400 5100400 5364700 8288600 20014 4908 18233 167992;167993;167994;167995;167996;167997;167998;167999;168000;168001;168002 133898 133898 1 GPVTDVAYSHDGAFLAVCDASK Unmodified 2279.0528 0.052846792 453 O75083 WDR1 WD repeat-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 4.78 3.71 5 1 3 1 3 2 1 1 1 78.812 75.982 2;3 3.9679E-61 92722 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 118.35 114.32 539910000 74202000 271700000 154390000 0 0 0 0 0 0 0 6316900 6082500 0 0 27220000 20015 453 18234 168003;168004;168005;168006;168007;168008;168009;168010;168011 133899;133900;133901;133902;133903;133904;133905;133906 133904 8 GPVTPGGLPPR Unmodified 1046.5873 0.58727866 4333 Q9H0L4 CSTF2T Cleavage stimulation factor subunit 2 tau variant yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 54.983 54.967 2 0.016403 61959 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 44.349 20.921 160980000 0 0 0 16038000 11789000 20626000 17985000 17979000 14210000 27642000 34712000 0 0 0 0 20016 4333 18235 168012;168013;168014;168015;168016;168017;168018;168019 133907 133907 1 GPVYIGELPQDFLR Unmodified 1602.8406 0.84059282 4324 Q9H0E2 TOLLIP Toll-interacting protein yes yes 0 0 0 By MS/MS 10 0 1 1 90.552 90.691 2 0.019259 105050 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.844 32.153 2456100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2456100 20017 4324 18236 168020 133908 133908 1 GPYDFDQIK Unmodified 1081.508 0.50802529 2734 Q5JSH3 WDR44 WD repeat-containing protein 44 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 59.344 58.009 2 0.0074164 65836 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 72.485 58.709 929640000 27313000 739220000 10280000 7586900 5123900 5986400 8627000 8609200 6429200 11731000 23403000 21034000 9234700 13891000 31174000 20018 2734 18237 168021;168022;168023;168024;168025;168026;168027;168028;168029;168030;168031;168032;168033;168034;168035;168036 133909;133910;133911;133912;133913;133914;133915 133915 7 GPYESGSGHSSGLGHQESR Unmodified 1927.8409 0.84088018 104 CON__Q86YZ3;Q86YZ3 HRNR Hornerin yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 13.565 13.723 3;4 2.3196E-88 12468 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 173.37 163.23 + 608710000 0 0 0 58497000 34255000 46519000 14442000 120240000 24003000 78499000 39894000 62398000 65442000 31682000 32833000 20019 104 18238 168037;168038;168039;168040;168041;168042;168043;168044;168045;168046;168047;168048;168049;168050;168051;168052;168053;168054;168055;168056;168057;168058;168059;168060 133916;133917;133918;133919;133920;133921;133922;133923;133924;133925;133926;133927;133928;133929;133930;133931;133932;133933 133922 15 GPYESGSGHSSGLGHR Unmodified 1583.7077 0.70768116 104 CON__Q86YZ3;Q86YZ3 HRNR Hornerin yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 25 2 2 2 2 2 2 2 3 2 2 2 2 11.626 11.786 3;4 3.9916E-54 9998 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 154.07 148.99 + 8638800000 0 0 0 589790000 369150000 692780000 250270000 2762800000 419720000 855330000 215050000 1053200000 695380000 345610000 389640000 20020 104 18239 168061;168062;168063;168064;168065;168066;168067;168068;168069;168070;168071;168072;168073;168074;168075;168076;168077;168078;168079;168080;168081;168082;168083;168084;168085 133934;133935;133936;133937;133938;133939;133940;133941;133942;133943;133944;133945;133946;133947;133948;133949;133950;133951;133952;133953;133954;133955;133956;133957;133958;133959 133941 16 GPYESGSGHSSGLGHRESR Unmodified 1955.8834 0.8834137 104 CON__Q86YZ3;Q86YZ3 HRNR Hornerin yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 2 2 2 2 2 1 2 1 10.689 10.867 3;4 4.5702E-08 9509 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 79.311 68.696 + 127840000 0 0 0 0 0 12802000 0 43188000 8094100 7670400 0 33046000 4234000 6785500 12021000 20021 104 18240 168086;168087;168088;168089;168090;168091;168092;168093;168094;168095;168096;168097;168098;168099 133960;133961;133962;133963;133964;133965;133966;133967;133968;133969;133970 133963 10 GPYSVQGHR Unmodified 999.48863 0.48862725 3061 Q7LBC6 KDM3B Lysine-specific demethylase 3B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 11.453 11.6 2 0.0032198 9799 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 129.39 116.8 88149000 0 0 0 3667800 4152700 5453000 6274300 5963900 5008100 6110300 4791600 12491000 10401000 10098000 13737000 20022 3061 18241 168100;168101;168102;168103;168104;168105;168106;168107;168108;168109;168110;168111 133971;133972;133973;133974;133975;133976;133977;133978;133979;133980;133981;133982;133983 133974 13 GQAAVQQLQAEGLSPR Unmodified 1651.8642 0.86418181 1033;548 O75828;P16152 CBR3;CBR1 Carbonyl reductase [NADPH] 3;Carbonyl reductase [NADPH] 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 1 2 2 2 1 2 2 60.234 60.332 2;3 2.6763E-27 68615 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 155.02 111.71 366760000 0 0 0 16555000 10189000 8915900 18236000 15541000 7036500 15967000 44045000 51971000 7707500 35175000 135420000 20023 548;1033 18242 168112;168113;168114;168115;168116;168117;168118;168119;168120;168121;168122;168123;168124;168125;168126;168127;168128;168129;168130;168131;168132;168133 133984;133985;133986;133987;133988;133989;133990;133991;133992;133993;133994;133995;133996;133997;133998;133999 133991 14 GQADYEEVKK Unmodified 1165.5615 0.56151742 1406;2357 P39880;Q13948 CUX1 Homeobox protein cut-like 1;Protein CASP no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 13.119 13.267 3 0.014679 12566 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 34.231 26.305 73152000 0 0 0 3730600 5218100 2721900 7709400 5281700 3609000 6422600 10118000 8906500 7446600 0 11987000 20024 1406;2357 18243 168134;168135;168136;168137;168138;168139;168140;168141;168142;168143;168144 134000;134001;134002;134003;134004;134005 134000 5 GQAFVIFK Unmodified 908.51199 0.51198846 877;866 P08579;P09012 SNRPB2;SNRPA U2 small nuclear ribonucleoprotein B'';U1 small nuclear ribonucleoprotein A no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 72.779 72.953 2 0.030584 84075 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 55.441 37.674 613900000 0 0 0 0 0 44782000 50101000 38315000 34750000 63240000 62690000 101480000 55663000 56154000 106730000 20025 866;877 18244 168145;168146;168147;168148;168149;168150;168151;168152;168153;168154 134006;134007 134006 2 GQAGFFSTPGGASR Unmodified 1338.6317 0.63166267 3284 Q8IYI6 EXOC8 Exocyst complex component 8 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 52.083 52.764 2 0.0011593 59370 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.641 41.538 19435000 0 0 0 0 0 0 0 0 0 0 0 19435000 0 0 0 20026 3284 18245 168155;168156 134008;134009 134009 2 GQAGPPESLGVPTAQEASVLR Unmodified 2063.0647 0.064732107 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 77.548 77.605 2;3 2.6258E-10 89447 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 98.694 85.493 228270000 0 0 0 7916200 15527000 14036000 15526000 17402000 12592000 25081000 23616000 25638000 20665000 22412000 27862000 20027 5262 18246 168157;168158;168159;168160;168161;168162;168163;168164;168165;168166;168167;168168;168169;168170;168171;168172;168173;168174;168175;168176;168177;168178;168179;168180 134010;134011;134012;134013;134014;134015;134016;134017;134018;134019;134020;134021;134022;134023;134024;134025 134017 14 GQALEPTESK Unmodified 1058.5244 0.52440364 3627 Q92570 NR4A3 Nuclear receptor subfamily 4 group A member 3 yes yes 0 0 0 By MS/MS 10 0 1 1 15.895 16.409 2 0.012318 15382 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.614 43.779 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20028 3627 18247 168181 134026 134026 1 GQALITFEK Unmodified 1005.5495 0.54949617 2264 Q13287 NMI N-myc-interactor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 65.114 59.435 2 0.017865 76510 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.334 52.884 79849000 11880000 65809000 2160200 0 0 0 0 0 0 0 0 0 0 0 0 20029 2264 18248 168182;168183;168184;168185 134027;134028 134027 2 GQAPLPMAHIEK Oxidation (M) 1306.6704 0.67035637 2765 Q5T0F9 CC2D1B Coiled-coil and C2 domain-containing protein 1B yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 41.949 37.571 3 0.0051498 49112 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 53.6 44.168 31274000 0 26087000 5186400 0 0 0 0 0 0 0 0 0 0 0 0 20030 2765 18249 168186;168187 134029 134029 4390 1 GQAPLPMAHIEK Unmodified 1290.6754 0.67544174 2765 Q5T0F9 CC2D1B Coiled-coil and C2 domain-containing protein 1B yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 58.474 51.445 3 0.0026914 66539 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 54.524 37.499 68528000 28875000 39653000 0 0 0 0 0 0 0 0 0 0 0 0 0 20031 2765 18249 168188;168189 134030;134031 134030 2 GQASQITASNLVQNYK Unmodified 1720.8744 0.87441214 4120 Q9BRX5 GINS3 DNA replication complex GINS protein PSF3 yes yes 0 0 0 By MS/MS By MS/MS By matching 6.25 3.77 1 1 2 2 1 1 65.452 63.037 2 5.1582E-41 80001 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 171.57 154.94 34608000 0 23851000 0 0 0 0 0 0 0 0 4066300 0 0 0 6690500 20032 4120 18250 168190;168191;168192;168193 134032;134033;134034 134032 3 GQAVDYEGSR Unmodified 1080.4836 0.48360145 982 P13667 PDIA4 Protein disulfide-isomerase A4 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 16.429 16.82 2 0.012397 15635 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 52.549 41.857 42653000 0 0 0 0 0 0 0 0 0 0 0 0 0 12901000 29752000 20033 982 18251 168194;168195 134035;134036 134036 1 GQAVDYEGSRTQEEIVAK Unmodified 1978.9596 0.95959833 982 P13667 PDIA4 Protein disulfide-isomerase A4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 46.729 41.242 3 1.5527E-05 51368 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 86.367 79.136 504110000 40093000 447350000 16669000 0 0 0 0 0 0 0 0 0 0 0 0 20034 982 18252 168196;168197;168198;168199 134037;134038;134039;134040;134041;134042;134043 134039 7 GQCEQEEEVLK Unmodified 1347.5976 0.59764493 5193 Q9Y4C1 KDM3A Lysine-specific demethylase 3A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.461 30.65 2 6.3252E-05 33190 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 131.44 73.48 150300000 0 0 0 7646000 10110000 10957000 10468000 10059000 8807100 13981000 15100000 23064000 13058000 12068000 14986000 20035 5193 18253 168200;168201;168202;168203;168204;168205;168206;168207;168208;168209;168210;168211 134044;134045;134046;134047;134048;134049;134050;134051;134052;134053;134054;134055 134048 12 GQDAEMLR Oxidation (M) 934.41783 0.41783007 4339 Q9H0U9 TSPYL1 Testis-specific Y-encoded-like protein 1 yes yes 0 1 0 By MS/MS 10 0 1 1 11.458 11.816 2 0.043595 10575 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 66.073 22.827 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20036 4339 18254 168212 134056 134056 1 GQDEASAGGIWGFIK Unmodified 1534.7416 0.74160705 3922 Q96M27 PRRC1 Protein PRRC1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 86.742 86.883 2 5.9181E-15 100779 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 103.91 89.49 69956000 0 0 0 0 0 3781500 2614700 7120900 7201100 8171600 6449300 7323300 3496900 5148000 18648000 20037 3922 18255 168213;168214;168215;168216;168217;168218;168219;168220;168221;168222 134057;134058;134059;134060;134061;134062;134063;134064;134065;134066 134063 10 GQDEDQVHSVPIAQMGNYQEYLK Oxidation (M) 2664.2126 0.21259491 4982 Q9UL03 INTS6 Integrator complex subunit 6 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 8.25 3.03 1 3 1 1 1 1 73.664 72.873 3 1.1566E-07 87047 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 72.316 60.793 29986000 0 7404900 0 0 0 0 0 5758000 0 9490200 0 0 7333100 0 0 20038 4982 18256 168223;168224;168225;168226 134067;134068 134068 6330 2 GQDEDQVHSVPIAQMGNYQEYLK Unmodified 2648.2177 0.21768029 4982 Q9UL03 INTS6 Integrator complex subunit 6 yes yes 0 0 0 By MS/MS 3 0 1 1 83.516 80.265 3 0.006139 96147 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 17.025 13.13 3825600 0 3825600 0 0 0 0 0 0 0 0 0 0 0 0 0 20039 4982 18256 168227 134069 134069 1 GQDGLQNDFLSISEDVPRPPDTVSTGK Unmodified 2871.3886 0.38864502 3950 Q96PZ0 PUS7 Pseudouridylate synthase 7 homolog yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 90.488 86.962 3 1.93E-55 108064 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.62 108.12 71547000 0 68106000 3441300 0 0 0 0 0 0 0 0 0 0 0 0 20040 3950 18257 168228;168229;168230 134070;134071;134072 134070 2 GQDGSPQIENIQPFSAK Unmodified 1814.8799 0.87989145 1449 P42226 STAT6 Signal transducer and activator of transcription 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.629 70.699 2 4.655E-82 80688 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 179.67 162.31 111710000 0 0 0 4969500 4951600 9686300 5643100 9742600 5236400 14750000 11033000 10217000 7544500 8534100 19397000 20041 1449 18258 168231;168232;168233;168234;168235;168236;168237;168238;168239;168240;168241;168242 134073;134074;134075;134076;134077;134078;134079;134080;134081;134082;134083;134084 134076 12 GQDHCGIESEVVAGIPR Unmodified 1822.8632 0.86319553 849 P07858 CTSB Cathepsin B;Cathepsin B light chain;Cathepsin B heavy chain yes yes 0 0 0 By MS/MS 10 0 1 1 69.488 68.84 3 0.00032184 79611 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 42.913 34.529 7071200 0 0 0 7071200 0 0 0 0 0 0 0 0 0 0 0 20042 849 18259 168243 134085 134085 1 GQDIEYIEIR Unmodified 1234.6194 0.61936665 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.566 67.649 2 0.0015425 77692 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 105.4 82.656 182400000 0 0 0 13190000 6441400 14737000 12500000 7878000 6731300 18930000 23157000 22141000 17375000 12591000 26726000 20043 3676 18260 168244;168245;168246;168247;168248;168249;168250;168251;168252;168253;168254;168255 134086;134087;134088;134089;134090;134091;134092;134093;134094;134095;134096;134097;134098 134087 13 GQDIFIIQTIPR Unmodified 1399.7823 0.78234966 2413 Q14558 PRPSAP1 Phosphoribosyl pyrophosphate synthase-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 85.421 85.554 2 0.0041962 99377 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 70.942 61.254 4553200 0 0 0 0 0 0 0 0 0 0 0 4553200 0 0 0 20044 2413 18261 168256;168257;168258;168259 134099;134100;134101;134102 134102 4 GQDMETEAHQNK Unmodified 1386.5834 0.58339185 2519 Q15363 TMED2 Transmembrane emp24 domain-containing protein 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 2 22 1 1 2 2 1 2 2 1 2 2 2 2 2 2 7.324 7.1544 2;3 1.466E-14 5571 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 125.97 121.63 621700000 2467900 130350000 0 22057000 17730000 22181000 19240000 28539000 18283000 63867000 95423000 41459000 45359000 36633000 78111000 20045 2519 18262 168260;168261;168262;168263;168264;168265;168266;168267;168268;168269;168270;168271;168272;168273;168274;168275;168276;168277;168278;168279;168280;168281;168282;168283 134103;134104;134105;134106;134107;134108;134109;134110;134111;134112;134113;134114;134115 134112 11 GQDMETEAHQNK Oxidation (M) 1402.5783 0.57830647 2519 Q15363 TMED2 Transmembrane emp24 domain-containing protein 2 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 1.533 -1.7872 3 0.011472 1084 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 44.614 37.781 14259000 0 14259000 0 0 0 0 0 0 0 0 0 0 0 0 0 20046 2519 18262 168284;168285 134116 134116 4139 1 GQDPLADRGEK Unmodified 1184.5786 0.57856447 2444 Q14764 MVP Major vault protein yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 20.07 16.397 2 0.042269 21580 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.898 73.942 12296000 0 12296000 0 0 0 0 0 0 0 0 0 0 0 0 0 20047 2444 18263 168286;168287 134117 134117 0 GQDSIEPVPGQK Unmodified 1253.6252 0.62518031 4593 Q9NR50 EIF2B3 Translation initiation factor eIF-2B subunit gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 34.759 31.239 2 1.6004E-05 42380 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 109.66 70.359 29566000 6185900 7973000 0 0 0 0 0 0 0 0 0 0 0 0 15407000 20048 4593 18264 168288;168289;168290 134118;134119;134120 134120 3 GQDSLSTDTGQSR Unmodified 1350.6012 0.60115041 2836 Q5W0V3 FAM160B1 Protein FAM160B1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 15.802 16.002 2 0.022723 16024 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 46.706 41.359 43242000 0 0 0 0 2468300 5562700 3296300 3022200 1603700 4512200 2246300 8317700 5407600 1720000 5084600 20049 2836 18265 168291;168292;168293;168294;168295;168296;168297;168298;168299;168300;168301 134121;134122;134123;134124 134121 4 GQECEYPPTQDGR Unmodified 1535.6311 0.63107033 1631 P50579 METAP2 Methionine aminopeptidase 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 24.265 24.452 2 0.00071681 26145 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 71.889 66.165 22162000 0 0 0 1462300 0 3299800 2813500 3132000 0 3249800 3618500 4586000 0 0 0 20050 1631 18266 168302;168303;168304;168305;168306;168307;168308;168309;168310 134125;134126;134127;134128;134129;134130 134125 5 GQECEYPPTQDGRTAAWRTTSEEK Unmodified 2796.2409 0.24093493 1631 P50579 METAP2 Methionine aminopeptidase 2 yes yes 0 0 2 By MS/MS 2 0 1 1 46.74 42.888 4 0.0011598 53679 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 38.26 32.268 7415000 0 0 7415000 0 0 0 0 0 0 0 0 0 0 0 0 20051 1631 18267 168311 134131;134132 134131 2 GQEDSLASAVDAATEQK Unmodified 1718.7959 0.79588705 3541 Q8WUD4 CCDC12 Coiled-coil domain-containing protein 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 68.551 67.706 2 4.0373E-10 77227 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.629 83.658 53056000 0 20342000 0 0 4066500 0 0 0 0 0 6061200 0 6622100 5697200 10267000 20052 3541 18268 168312;168313;168314;168315;168316;168317 134133;134134;134135;134136;134137;134138;134139 134135 7 GQEEGGGWDVEEDLELPPELDISPGAAGGAEDGFFVPPTK Unmodified 4110.8858 0.88583085 1721 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 98.627 92.886 3 2.3922E-08 117032 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 39.487 36.041 27952000 13385000 14567000 0 0 0 0 0 0 0 0 0 0 0 0 0 20053 1721 18269 168318;168319 134140;134141 134141 2 GQEEISGALPVASPASSR Unmodified 1754.8799 0.87989145 4844 Q9UBK8 MTRR Methionine synthase reductase yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 63.589 63.671 2 1.2512E-42 72181 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 148.91 134.65 72107000 0 0 0 5164300 3253200 9620000 4441900 4343100 2158800 8476300 8622700 8589600 4308300 0 13129000 20054 4844 18270 168320;168321;168322;168323;168324;168325;168326;168327;168328;168329;168330 134142;134143;134144;134145;134146;134147;134148;134149 134145 8 GQELIYAGMPITEVFK Oxidation (M) 1810.9175 0.91752251 1714 P53396 ACLY ATP-citrate synthase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 2 2 2 1 2 1 1 1 1 86.697 86.782 2;3 1.0924E-23 100582 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 121.04 110.14 873340000 0 0 0 6239100 46173000 56302000 131820000 210760000 176380000 71430000 59501000 94951000 0 3718700 16073000 20055 1714 18271 168331;168332;168333;168334;168335;168336;168337;168338;168339;168340;168341;168342;168343;168344;168345 134150;134151;134152;134153;134154;134155;134156;134157;134158;134159;134160;134161;134162;134163;134164;134165 134157 2774 16 GQELIYAGMPITEVFK Unmodified 1794.9226 0.92260789 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 93.247 93.349 2 8.3202E-05 108520 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 95.401 80.525 65160000 0 0 0 0 2974100 2646200 7089100 22599000 11783000 6201700 6514400 5352400 0 0 0 20056 1714 18271 168346;168347;168348;168349;168350;168351;168352;168353 134166;134167;134168;134169;134170;134171;134172;134173;134174;134175;134176 134167 11 GQENGLDGTK Unmodified 1017.4727 0.47270242 2380 Q14157 UBAP2L Ubiquitin-associated protein 2-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 8.1576 8.282 2 0.0018002 6376 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 101.64 76.721 46365000 0 0 0 3452100 3188800 3641300 6650300 4285200 5866400 2666300 6794700 0 3446300 2739200 3634800 20057 2380 18272 168354;168355;168356;168357;168358;168359;168360;168361;168362;168363;168364;168365 134177;134178;134179;134180;134181;134182;134183;134184;134185;134186;134187;134188;134189;134190;134191;134192 134186 16 GQEQLLENIK Unmodified 1170.6245 0.62445203 2041 Q00613 HSF1 Heat shock factor protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 57.086 57.206 2 0.0017695 64862 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 114.89 74.013 182320000 0 0 0 11463000 9840100 13078000 12928000 12498000 9002200 14226000 21577000 20652000 15122000 15432000 26497000 20058 2041 18273 168366;168367;168368;168369;168370;168371;168372;168373;168374;168375;168376;168377 134193;134194;134195;134196;134197;134198;134199;134200;134201;134202;134203;134204 134194 12 GQEQREFALSNLK Unmodified 1518.7791 0.77905519 4168 Q9BUQ8 DDX23 Probable ATP-dependent RNA helicase DDX23 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 64.059 56.968 3 0.0039509 76513 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.365 62.808 88720000 76310000 12410000 0 0 0 0 0 0 0 0 0 0 0 0 0 20059 4168 18274 168378;168379 134205 134205 0 GQESAGIVTSDGSSVPTFK Unmodified 1865.9007 0.90068647 2124 Q06203 PPAT Amidophosphoribosyltransferase yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 66.007 66.083 2 5.4653E-50 75680 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 178.67 169.71 56447000 0 0 0 2459500 2437100 0 2802000 3902700 0 0 8628700 11352000 0 5341500 19523000 20060 2124 18275 168380;168381;168382;168383;168384;168385;168386;168387;168388 134206;134207;134208;134209;134210;134211;134212;134213 134212 8 GQESSSDQEQVDVESIDFSK Unmodified 2212.9608 0.96078012 3897 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 2 2 1 2 1 1 2 67.473 67.67 2;3 3.534E-09 77064 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.729 70.325 45159000 0 0 0 0 0 4934600 7769800 0 5726100 5398200 9140500 0 4034800 3110600 5044600 20061 3897 18276 168389;168390;168391;168392;168393;168394;168395;168396;168397;168398;168399;168400 134214;134215;134216;134217;134218;134219;134220 134216 7 GQEVETSVTYYR Unmodified 1430.6678 0.66777341 302 O43169 CYB5B Cytochrome b5 type B yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 45.805 46.037 2 0.0079926 51283 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 49.466 38.636 44974000 0 0 0 0 3768800 2737100 0 5232300 2132100 3098300 0 10427000 7752700 3255100 6570000 20062 302 18277 168401;168402;168403;168404;168405;168406;168407;168408;168409 134221;134222;134223 134223 3 GQEVETSVTYYRLEEVAK Unmodified 2100.0375 0.037514303 302 O43169 CYB5B Cytochrome b5 type B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 72.48 71.685 3 4.3636E-05 92134 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.418 68.489 48815000 9255800 0 0 0 2328500 2855800 0 4790100 4084600 6432400 4606200 6122900 0 0 8339000 20063 302 18278 168410;168411;168412;168413;168414;168415;168416;168417;168418 134224;134225;134226;134227;134228;134229;134230;134231;134232 134228 6 GQEYPAIVEFAPFQK Unmodified 1722.8617 0.86172219 4267 Q9BZI7 UPF3B Regulator of nonsense transcripts 3B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.64 2.9 1 1 9 2 1 1 1 1 1 1 2 1 89.426 88.731 2 8.717E-05 103152 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 90.685 77.485 55786000 0 33249000 0 0 0 0 0 1866900 2483400 3409800 2544500 3213700 1510200 1543600 5965600 20064 4267 18279 168419;168420;168421;168422;168423;168424;168425;168426;168427;168428;168429 134233;134234;134235;134236;134237;134238;134239;134240;134241;134242;134243;134244 134244 12 GQFIEELITK Unmodified 1176.639 0.63903946 2559 Q15650 TRIP4 Activating signal cointegrator 1 yes yes 0 0 0 By MS/MS 2 0 1 1 87.294 79.164 2 0.007958 103087 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.178 75.782 6841300 6841300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20065 2559 18280 168430 134245 134245 1 GQFNFDHPDAFDNELILK Unmodified 2119.0011 0.0010692176 4277 Q9BZX2 UCK2 Uridine-cytidine kinase 2 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 89.392 85.873 3 0.0005685 107261 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 56.121 47.471 79786000 0 75935000 3850800 0 0 0 0 0 0 0 0 0 0 0 0 20066 4277 18281 168431;168432;168433 134246;134247;134248 134247 3 GQFSTDELVAEVEK Unmodified 1550.7464 0.74641766 2040;1723 P53675;Q00610 CLTCL1;CLTC Clathrin heavy chain 2;Clathrin heavy chain 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 79.335 78.679 2 2.4959E-29 96753 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.45 114.22 1078600000 0 226980000 2836700 21903000 33152000 89932000 33566000 46910000 34095000 93714000 81537000 90110000 52328000 67286000 204240000 20067 1723;2040 18282 168434;168435;168436;168437;168438;168439;168440;168441;168442;168443;168444;168445;168446;168447;168448 134249;134250;134251;134252;134253;134254;134255;134256;134257;134258;134259;134260;134261;134262;134263;134264;134265;134266 134253 18 GQFSTDELVAEVEKR Unmodified 1706.8475 0.84752869 2040;1723 P53675;Q00610 CLTCL1;CLTC Clathrin heavy chain 2;Clathrin heavy chain 1 no no 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 6 1 1 1 1 1 1 77.252 77.411 3 0.0030538 89466 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.186 51.006 42400000 0 0 0 0 0 0 0 0 0 3817500 8168100 11549000 5556600 4713200 8595800 20068 1723;2040 18283 168449;168450;168451;168452;168453;168454 134267;134268;134269 134269 2 GQGALDPNGTR Unmodified 1084.5261 0.52613497 4507 Q9HC52 CBX8 Chromobox protein homolog 8 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 16.703 16.901 2 0.018117 16520 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 43.651 28.888 50896000 0 0 0 2131600 2789800 0 5573500 2916000 3014600 3512600 6947400 6912500 6342300 5066100 5689800 20069 4507 18284 168455;168456;168457;168458;168459;168460;168461;168462;168463;168464;168465 134270;134271;134272;134273 134273 4 GQGAPAREPIISSEEQK Unmodified 1795.9064 0.90644055 1790 P57076 C21orf59 UPF0769 protein C21orf59 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 33.859 34.106 3 1.9622E-06 37024 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 58.246 43.24 135920000 0 0 0 10321000 0 15389000 8587800 0 6453900 14804000 19016000 14752000 10524000 13356000 22718000 20070 1790 18285 168466;168467;168468;168469;168470;168471;168472;168473;168474;168475;168476 134274;134275;134276;134277;134278;134279;134280;134281;134282;134283 134277 10 GQGEQGSTGGTNISSTSEPK Unmodified 1920.8661 0.86609188 2617 Q16610 ECM1 Extracellular matrix protein 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 22.264 22.266 2 2.7245E-20 23322 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 115.78 110.17 19160000 0 0 0 16316000 0 0 0 2843500 0 0 0 0 0 0 0 20071 2617 18286 168477;168478 134284;134285 134285 2 GQGEQGSTGGTNISSTSEPKEE Unmodified 2178.9513 0.95127807 2617 Q16610 ECM1 Extracellular matrix protein 1 yes yes 0 0 1 By MS/MS By matching 10 0 2 1 1 26.459 26.52 2 0.0027537 28388 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 63.894 63.894 10981000 0 0 0 9753900 0 0 0 0 0 0 0 0 1227000 0 0 20072 2617 18287 168479;168480 134286 134286 1 GQGESDPLDHEPAVSPLLPR Unmodified 2113.044 0.043996665 731 P00519 ABL1 Tyrosine-protein kinase ABL1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 77.368 77.181 3 0.0003802 89132 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 40.384 31.441 9004700 0 0 0 2051900 0 0 0 0 0 6952800 0 0 0 0 0 20073 731 18288 168481;168482 134287;134288 134288 2 GQGGTEGGVGELI Unmodified 1172.5673 0.56733108 4169 Q9BUR4 WRAP53 Telomerase Cajal body protein 1 yes yes 0 0 0 By MS/MS 1 0 1 1 104.49 109.75 2 0.033235 90053 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 69.276 47.975 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20074 4169 18289 168483 134289 134289 1 GQGHQYELNSK Unmodified 1259.5895 0.58946351 134 O00257 CBX4 E3 SUMO-protein ligase CBX4 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 16.572 12.847 3 0.0085627 16660 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 50.95 37.859 38951000 16824000 22127000 0 0 0 0 0 0 0 0 0 0 0 0 0 20075 134 18290 168484;168485;168486 134290;134291;134292 134290 2 GQGPSAEAHEGAPDPMPAALHPEEVAAR Unmodified 2791.2984 0.29839023 4516 Q9HCJ3 RAVER2 Ribonucleoprotein PTB-binding 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.802 63.893 4 2.3266E-09 73031 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 44.743 41.544 169130000 0 0 0 8505400 6654200 16044000 8990400 15973000 8484900 17312000 13937000 16297000 14873000 17350000 24712000 20076 4516 18291 168487;168488;168489;168490;168491;168492;168493;168494;168495;168496;168497;168498 134293;134294;134295;134296;134297;134298;134299;134300;134301;134302;134303 134295 11 GQGRSSVDLEESSTK Unmodified 1578.7485 0.74854293 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 22.678 19.233 3 0.00055868 25474 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 52.341 44.427 32431000 0 20372000 12059000 0 0 0 0 0 0 0 0 0 0 0 0 20077 3443 18292 168499;168500 134304;134305 134304 2 GQGSSPVAMQK Unmodified 1088.5284 0.52844316 1073 P18206 VCL Vinculin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 18.803 19.056 2 0.00041376 19631 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 86.136 63.423 185620000 0 0 0 14792000 0 17307000 6598600 0 0 21486000 20326000 20568000 13632000 17935000 52975000 20078 1073 18293 168501;168502;168503;168504;168505;168506;168507;168508;168509 134306;134307;134308;134309;134310;134311;134312;134313;134314 134314 6 GQGSSPVAMQK Oxidation (M) 1104.5234 0.52335778 1073 P18206 VCL Vinculin yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 7.7894 7.9399 2 6.3391E-05 5799 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 110.87 85.135 103800000 0 0 0 5127600 0 6584000 4445700 3761800 2875700 9821700 20643000 13653000 6920600 12503000 17467000 20079 1073 18293 168510;168511;168512;168513;168514;168515;168516;168517;168518;168519;168520 134315;134316;134317;134318;134319;134320;134321;134322 134318 1531 6 GQGSVSASVTEGQQNEQ Unmodified 1704.7551 0.75508487 1769 P55735 SEC13 Protein SEC13 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.25 2.49 1 11 1 1 1 1 1 1 1 1 1 1 1 1 29.021 29.259 2 3.881E-36 31318 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 127.83 121.17 179740000 0 0 0 0 9774100 9317400 12736000 12501000 7589700 15899000 17479000 17758000 14383000 17040000 45257000 20080 1769 18294 168521;168522;168523;168524;168525;168526;168527;168528;168529;168530;168531;168532 134323;134324;134325;134326;134327;134328;134329;134330;134331;134332 134330 10 GQGTAATGNQATPK Unmodified 1300.6371 0.63714198 2768 Q5T1M5 FKBP15 FK506-binding protein 15 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 8.0279 7.8548 2 1.0158E-07 5425 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.058 86.427 79322000 3634800 0 0 1801900 1813100 6432300 3518700 3033000 5523100 6783300 15848000 8022400 5645600 6471100 10795000 20081 2768 18295 168533;168534;168535;168536;168537;168538;168539;168540;168541;168542;168543;168544;168545 134333;134334;134335;134336;134337;134338;134339 134333 6 GQHDLESDVQQQLFK Unmodified 1770.8537 0.8536767 5061 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 0 0 0 By MS/MS 2 0 1 1 78.744 74.008 2 0.0007184 92308 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.536 68.904 16718000 0 16718000 0 0 0 0 0 0 0 0 0 0 0 0 0 20082 5061 18296 168546 134340 134340 1 GQHLSDAFAQVNPLK Unmodified 1623.8369 0.83690442 1288 P30711 GSTT1 Glutathione S-transferase theta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.5 0.5 2 2 2 1 1 78.479 73.958 3 0.00025356 94911 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.287 72.15 177910000 164420000 2542100 10949000 0 0 0 0 0 0 0 0 0 0 0 0 20083 1288 18297 168547;168548;168549;168550 134341;134342;134343 134342 3 GQHSNVDMLVR Oxidation (M) 1270.6088 0.60881874 4666 Q9NVE7 PANK4 Pantothenate kinase 4 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 9 1 2 2 1 1 1 1 25.973 25.998 2;3 0.0035758 27915 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 59.067 46.014 160240000 0 0 0 7659300 79904000 58541000 4497400 0 5307000 0 0 3162200 1163500 0 0 20084 4666 18298 168551;168552;168553;168554;168555;168556;168557;168558;168559 134344;134345;134346 134345 6079 2 GQHSNVDMLVR Unmodified 1254.6139 0.61390412 4666 Q9NVE7 PANK4 Pantothenate kinase 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 14 2 2 2 1 2 1 1 1 1 1 36.841 36.885 2;3 0.0028219 41351 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 49.159 25.783 360080000 0 0 0 89112000 113390000 116380000 5649800 12327000 6493100 3637700 0 8146200 0 2095200 2853000 20085 4666 18298 168560;168561;168562;168563;168564;168565;168566;168567;168568;168569;168570;168571;168572;168573 134347;134348;134349;134350;134351 134348 2 GQHTETLLAGSLAK Unmodified 1424.7623 0.7623425 2353 Q13889 GTF2H3 General transcription factor IIH subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 59.032 53.049 3 0.0029721 72363 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.885 45.206 67970000 29756000 26446000 11767000 0 0 0 0 0 0 0 0 0 0 0 0 20086 2353 18299 168574;168575;168576 134352;134353;134354 134353 2 GQHVICVTPK Unmodified 1137.5965 0.59646314 4440 Q9H7Z6 KAT8 Histone acetyltransferase KAT8 yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 34.865 30.015 2 0.013716 42154 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.399 31.607 9651800 7965600 0 1686200 0 0 0 0 0 0 0 0 0 0 0 0 20087 4440 18300 168577;168578 134355 134355 1 GQHVPGSPFQFTVGPLGEGGAHK Unmodified 2303.1447 0.14471376 1124 P21333 FLNA Filamin-A no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.27 3.62 2 2 7 3 1 1 1 1 1 1 2 79.773 78.504 3;4 5.8603E-34 90066 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 101.33 93.143 207320000 34041000 7683600 0 0 0 16574000 0 0 0 0 8701300 9923300 5527500 6381100 118480000 20088 1124 18301 168579;168580;168581;168582;168583;168584;168585;168586;168587;168588;168589 134356;134357;134358;134359;134360;134361;134362;134363;134364;134365;134366;134367 134359 12 GQICRVTTVTEIGK Unmodified 1560.8294 0.8293762 1721 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 0 0 1 By MS/MS By matching 2 0 2 1 1 54.792 48.741 3 0.0029762 66870 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.515 67.416 216850000 212680000 0 4164200 0 0 0 0 0 0 0 0 0 0 0 0 20089 1721 18302 168590;168591 134368 134368 0 GQIEEAGWSYVGGWTGQGGSK Unmodified 2152.9814 0.98139641 861 P08237 PFKM ATP-dependent 6-phosphofructokinase, muscle type yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 84.182 80.58 2 9.3547E-06 99941 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 56.424 43.239 30386000 0 28278000 2107900 0 0 0 0 0 0 0 0 0 0 0 0 20090 861 18303 168592;168593 134369;134370 134369 1 GQIEVAFR Unmodified 918.49232 0.49231565 1456 P42357 HAL Histidine ammonia-lyase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 53.508 53.271 2 0.0075172 61394 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 89.369 53.184 58147000 0 0 0 34149000 2870200 0 3332100 0 0 17796000 0 0 0 0 0 20091 1456 18304 168594;168595;168596;168597 134371 134371 1 GQILMPNIGYGSNK Unmodified 1490.7551 0.75514863 1928 P62910 RPL32 60S ribosomal protein L32 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 74.509 74.712 2 0.00034971 85743 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 85.813 51.281 46376000 0 0 0 0 0 0 0 0 11425000 12741000 0 0 0 0 22210000 20092 1928 18305 168598;168599;168600;168601;168602 134372;134373;134374;134375 134374 4 GQILMPNIGYGSNK Oxidation (M) 1506.7501 0.75006325 1928 P62910 RPL32 60S ribosomal protein L32 yes yes 0 1 0 By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 17 1 1 1 1 2 1 2 2 2 1 1 2 60.717 60.884 2 0.00010995 69018 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 81.92 63.248 81536000 0 0 0 3384600 2545300 4945200 2539000 5128400 3982500 11035000 6234500 16505000 6871200 4741800 13623000 20093 1928 18305 168603;168604;168605;168606;168607;168608;168609;168610;168611;168612;168613;168614;168615;168616;168617;168618;168619 134376;134377;134378;134379;134380;134381;134382;134383;134384 134384 3106 6 GQILMPNIGYGSNKK Unmodified 1618.8501 0.85011165 1928 P62910 RPL32 60S ribosomal protein L32 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.237 65.325 3 0.00038597 74003 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.41 42.507 129540000 0 0 0 8090700 2807400 5048700 5533400 10097000 7597000 11440000 12950000 20673000 11405000 10140000 23753000 20094 1928 18306 168620;168621;168622;168623;168624;168625;168626;168627;168628;168629;168630;168631 134385;134386;134387;134388;134389;134390;134391;134392;134393;134394;134395 134387 11 GQILTMANPIIGNGGAPDTTALDELGLSK Unmodified 2866.4746 0.47462326 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 97.821 93.048 3 1.9696E-06 115198 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 41.601 36.233 33705000 0 33705000 0 0 0 0 0 0 0 0 0 0 0 0 0 20095 1300 18307 168632 134396 134396 1 GQINNSIK Unmodified 872.47158 0.4715802 1383 P36952 SERPINB5 Serpin B5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.36 2.01 1 10 1 1 1 1 1 1 1 1 1 1 1 13.453 13.265 2 0.011381 12426 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 77.058 43.7 279670000 0 46026000 0 15811000 8393300 27292000 13754000 0 8982400 27267000 30375000 28000000 17504000 0 56262000 20096 1383 18308 168633;168634;168635;168636;168637;168638;168639;168640;168641;168642;168643 134397;134398;134399;134400;134401;134402 134402 6 GQIQAVASPDDPIRR Unmodified 1621.8536 0.85361712 4645 Q9NUJ3 TCP11L1 T-complex protein 11-like protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 46.914 47.093 3 0.004178 52947 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 28.212 14.128 57613000 0 0 0 0 5479000 5785200 6010400 0 4792700 8921700 9887600 7905700 8830800 0 0 20097 4645 18309 168644;168645;168646;168647;168648;168649;168650;168651 134403;134404;134405;134406;134407 134403 5 GQIQLDPQTVETK Unmodified 1455.7569 0.75692277 2219 Q12979 ABR Active breakpoint cluster region-related protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 55.623 55.749 2 0.0016941 69968 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.47 92.504 45355000 0 0 0 2487400 2525000 5516500 3865200 2686800 2382300 4871400 4355900 5142600 2751400 2920100 5850300 20098 2219 18310 168652;168653;168654;168655;168656;168657;168658;168659;168660;168661;168662;168663;168664 134408;134409;134410;134411 134410 4 GQIVPTELALHLK Unmodified 1417.8293 0.82929985 3713 Q969F9 HPS3 Hermansky-Pudlak syndrome 3 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 81.09 79.546 3 0.0020775 102388 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.76 42.459 141130000 66203000 25800000 0 0 3320900 0 0 0 9903600 7722200 4861800 0 0 6306800 17012000 20099 3713 18311 168665;168666;168667;168668;168669;168670;168671;168672 134412;134413;134414;134415 134414 4 GQLCDLNAELK Unmodified 1259.618 0.61798644 4199 Q9BW19 KIFC1 Kinesin-like protein KIFC1 yes yes 0 0 0 By MS/MS 10 0 1 1 57.401 57.944 2 0.010994 65741 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.981 36.697 8408000 0 0 0 0 0 0 0 0 0 0 0 8408000 0 0 0 20100 4199 18312 168673 134416 134416 1 GQLCELSCSTDYR Unmodified 1587.6657 0.66574127 4069 Q99873 PRMT1 Protein arginine N-methyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 6.25 3.77 1 1 2 2 1 1 52.442 49.666 2 8.7835E-10 63370 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.86 111.74 117390000 0 103110000 0 2721500 0 0 0 0 0 0 0 0 0 11561000 0 20101 4069 18313 168674;168675;168676;168677 134417;134418;134419;134420 134417 4 GQLCELSCSTDYRMR Unmodified 1874.8073 0.80733691 4069 Q99873 PRMT1 Protein arginine N-methyltransferase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 61.663 55.107 3 0.0008392 73408 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.115 57.579 270000000 207110000 35765000 27128000 0 0 0 0 0 0 0 0 0 0 0 0 20102 4069 18314 168678;168679;168680;168681 134421;134422;134423 134422 3 GQLCELSCSTDYRMR Oxidation (M) 1890.8023 0.80225153 4069 Q99873 PRMT1 Protein arginine N-methyltransferase 1 yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 50.051 44.119 3 0.00056322 60365 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.26 69.851 212540000 135040000 0 77495000 0 0 0 0 0 0 0 0 0 0 0 0 20103 4069 18314 168682;168683 134424;134425 134424 5574 1 GQLDCVITLHK Unmodified 1282.6704 0.67035637 3453 Q8NG31 CASC5 Protein CASC5 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 65.294 59.266 3 0.034033 79691 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 31.819 18.811 13103000 10675000 0 2427700 0 0 0 0 0 0 0 0 0 0 0 0 20104 3453 18315 168684;168685 134426 134426 1 GQLEANLLQVLEK Unmodified 1453.814 0.81404372 99 Q6KB66;CON__Q6KB66-1;CON__Q0VBK2 KRT80 Keratin, type II cytoskeletal 80 yes no 0 0 0 By MS/MS 10 0 1 1 90.702 90.818 2 0.0032286 105463 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 54.784 36.725 + 1315600 0 0 0 0 0 0 0 0 0 1315600 0 0 0 0 0 20105 99 18316 168686 134427 134427 1 GQLEQITGK Unmodified 972.52401 0.52400971 2757 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.278 32.464 2 0.02892 34179 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 48.794 27.847 71650000 0 0 0 5693400 5061500 5337700 5709300 4983800 3959300 6512900 7394000 6882400 6890500 5892500 7332400 20106 2757 18317 168687;168688;168689;168690;168691;168692;168693;168694;168695;168696;168697;168698 134428 134428 1 GQLESIVENIR Unmodified 1256.6725 0.67246486 1063 P17858 PFKL ATP-dependent 6-phosphofructokinase, liver type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.043 77.104 2 0.00034926 88997 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 118.71 83.488 244370000 0 0 0 2782000 8907900 19273000 9346700 21466000 12607000 30274000 26062000 24707000 11217000 19924000 57808000 20107 1063 18318 168699;168700;168701;168702;168703;168704;168705;168706;168707;168708;168709;168710 134429;134430;134431;134432;134433;134434;134435;134436;134437;134438;134439 134430 3 GQLESTLREK Unmodified 1159.6197 0.619701 2510 Q15276 RABEP1 Rab GTPase-binding effector protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 30.451 25.952 3 0.020993 33046 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 53.567 27.522 22186000 14110000 0 8076100 0 0 0 0 0 0 0 0 0 0 0 0 20108 2510 18319 168711;168712 134440 134440 1 GQLGDAVSGTDVR Unmodified 1273.6262 0.62624295 5054 Q9UPQ0 LIMCH1 LIM and calponin homology domains-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.948 39.129 2 2.1795E-41 42959 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 172.1 149.95 338020000 0 0 0 16618000 15460000 22810000 22232000 21029000 20129000 31449000 30609000 31066000 46202000 38772000 41647000 20109 5054 18320 168713;168714;168715;168716;168717;168718;168719;168720;168721;168722;168723;168724 134441;134442;134443;134444;134445;134446;134447;134448;134449;134450;134451;134452;134453 134451 13 GQLHVDGQK Unmodified 980.50394 0.50394297 248 O15067 PFAS Phosphoribosylformylglycinamidine synthase yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS 5.2 3.92 3 2 1 1 1 1 1 10.459 8.6733 2 0.00043007 13400 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 149.57 105.22 408170000 36216000 322990000 44629000 0 0 0 0 0 0 0 0 1520600 0 0 2815600 20110 248 18321 168725;168726;168727;168728;168729 134454;134455 134455 2 GQLIHTYNK Unmodified 1072.5665 0.56654322 3725 Q969T7 NT5C3B 7-methylguanosine phosphate-specific 5'-nucleotidase yes yes 0 0 0 By MS/MS 2 0 1 1 30.129 24.508 2 0.0074894 34406 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 100.98 73.497 15038000 15038000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20111 3725 18322 168730 134456 134456 1 GQLNADEISLRPAQSFLMNK Oxidation (M) 2247.1318 0.13176581 1974 P78344 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 80.437 80.517 3 3.7095E-38 93199 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 110.77 98.278 289840000 0 0 0 1849400 0 21081000 0 25615000 24757000 48706000 34645000 36540000 0 0 96646000 20112 1974 18323 168731;168732;168733;168734;168735;168736;168737;168738 134457;134458;134459;134460;134461;134462;134463;134464 134462 3169 8 GQLNADEISLRPAQSFLMNK Unmodified 2231.1369 0.13685119 1974 P78344 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 82.674 82.871 3 3.8008E-47 95572 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 101.64 84.49 55791000 0 0 0 0 0 0 0 1595600 0 0 0 0 0 0 54196000 20113 1974 18323 168739;168740 134465 134465 1 GQLPDYTSPVVLPYSR Unmodified 1790.9203 0.9202997 5092 Q9Y295 DRG1 Developmentally-regulated GTP-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 82.048 82.102 2 2.0668E-06 95017 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 83.204 70.436 84786000 0 0 0 3174300 4200800 9794700 4714000 5932500 4202800 9476700 11293000 0 5324700 6868900 19804000 20114 5092 18324 168741;168742;168743;168744;168745;168746;168747;168748;168749;168750;168751 134466;134467;134468;134469;134470 134467 5 GQLQDELEK Unmodified 1058.5244 0.52440364 3217 Q8IUD2 ERC1 ELKS/Rab6-interacting/CAST family member 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 36.5 36.359 2 0.014237 40604 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 58.596 39.865 37976000 0 0 0 6008400 4871300 9741700 8344400 9009800 0 0 0 0 0 0 0 20115 3217 18325 168752;168753;168754;168755;168756;168757;168758;168759;168760 134471;134472;134473;134474;134475;134476;134477;134478 134477 8 GQLQELSTR Unmodified 1030.5407 0.5407224 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 32.222 32.814 2 0.024212 34795 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.478 41.653 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20116 5049 18326 168761;168762 134479;134480 134479 2 GQLTNIVSPTAATTPR Unmodified 1625.8737 0.87368386 3432 Q8NEY1 NAV1 Neuron navigator 1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 64.031 64.08 2 7.8111E-05 73273 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 93.959 79.702 99834000 0 0 0 6104400 7514000 9837200 9744100 8275700 8373900 8712300 8393800 12914000 11155000 8810100 0 20117 3432 18327 168763;168764;168765;168766;168767;168768;168769;168770;168771;168772;168773 134481;134482;134483;134484;134485;134486;134487;134488;134489;134490;134491 134481 10 GQLTTDQVFPYPSVLNEEQTQFLK Unmodified 2781.3861 0.38612583 1591 P49748 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 96.225 92.187 3 1.0748E-56 114095 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.28 117.16 61506000 0 61506000 0 0 0 0 0 0 0 0 0 0 0 0 0 20118 1591 18328 168774;168775 134492;134493;134494 134492 3 GQLVEFLK Unmodified 932.53312 0.53311783 234 O14976 GAK Cyclin-G-associated kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 73.363 72.801 2 0.011381 84126 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 77.058 38.252 177840000 25412000 0 0 7802800 9625000 14932000 11747000 15809000 12569000 12090000 13137000 12235000 13447000 12611000 16426000 20119 234 18329 168776;168777;168778;168779;168780;168781;168782;168783;168784;168785;168786;168787;168788 134495;134496;134497;134498;134499;134500;134501;134502;134503;134504;134505;134506 134503 12 GQMEVWDVK Unmodified 1090.5117 0.51173046 4242 Q9BY44 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed yes yes 0 0 0 By MS/MS 10 0 1 1 59.547 60.14 2 0.015207 67797 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.59 47.175 5594500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5594500 20120 4242 18330 168789 134507 134507 1 GQMLGLGNPSFSDPFTGGGR Unmodified 1993.9316 0.93160944 5085 Q9Y263 PLAA Phospholipase A-2-activating protein yes yes 0 0 0 By MS/MS 10 0 1 1 86.897 87.055 2 4.099E-07 100655 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.034 51.402 4743000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4743000 20121 5085 18331 168790 134508 134508 1 GQNDLMGTAEDFADQFLRVTK Unmodified 2355.1165 0.11650968 268 O15260 SURF4 Surfeit locus protein 4 yes yes 0 0 1 By MS/MS 2 0 1 1 100.13 91.996 3 0.04548 118553 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 29.452 20.744 7472900 7472900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20122 268 18332 168791 134509 134509 0 GQNFQVLMIMNK 2 Oxidation (M) 1453.7058 0.70575559 2150 Q08188 TGM3 Protein-glutamine gamma-glutamyltransferase E;Protein-glutamine gamma-glutamyltransferase E 50 kDa catalytic chain;Protein-glutamine gamma-glutamyltransferase E 27 kDa non-catalytic chain yes yes 0 2 0 By MS/MS 10 0 1 1 67.349 66.671 2 0.011741 76992 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 47.603 35.389 8379000 0 0 0 8379000 0 0 0 0 0 0 0 0 0 0 0 20123 2150 18333 168792 134510 134510 3455;3456 0 GQNLHQILK Unmodified 1049.5982 0.5981777 2823 Q5VW36 FOCAD Focadhesin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 33.502 32.26 2 5.3089E-06 47723 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 157.34 96.583 68718000 49591000 0 0 4006400 0 6863400 0 0 0 3803100 0 0 0 0 4454400 20124 2823 18334 168793;168794;168795;168796;168797;168798 134511;134512;134513;134514 134513 4 GQNLLQTQDHAK Unmodified 1351.6844 0.68442653 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 22.766 23.097 2 8.666E-09 23208 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 140.16 122.34 32995000 0 0 0 0 0 2876700 2474700 0 0 2338200 2950600 6974100 5842700 4121100 5416700 20125 1492 18335 168799;168800;168801;168802;168803;168804;168805;168806;168807 134515;134516;134517;134518;134519;134520;134521;134522 134518 8 GQNPNATFGEVSK Unmodified 1347.6419 0.64189301 592 O94842;O15405;O94900 TOX4;TOX3;TOX TOX high mobility group box family member 4;TOX high mobility group box family member 3;Thymocyte selection-associated high mobility group box protein TOX yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36.461 35.782 2 4.9067E-13 40330 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 149.96 137.91 848190000 5225700 32736000 0 39781000 39691000 53203000 58248000 55149000 52576000 87157000 71748000 95607000 84926000 82494000 89650000 20126 592 18336 168808;168809;168810;168811;168812;168813;168814;168815;168816;168817;168818;168819;168820;168821 134523;134524;134525;134526;134527;134528;134529;134530;134531;134532;134533;134534;134535;134536 134536 14 GQNQPVLNITNK Unmodified 1324.7099 0.709913 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.082 47.248 2 1.2914E-05 52579 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 107.55 98.22 194610000 0 0 0 9733600 10147000 11473000 9529100 10316000 11539000 14855000 23276000 19719000 20761000 18782000 34484000 20127 1300 18337 168822;168823;168824;168825;168826;168827;168828;168829;168830;168831;168832;168833 134537;134538;134539;134540;134541;134542;134543;134544;134545;134546;134547;134548 134546 12 GQNSLALHK Unmodified 966.52468 0.52467841 940 P11233 RALA Ras-related protein Ral-A yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 20.741 16.544 2 0.021378 21594 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.127 45.615 21380000 13444000 7936600 0 0 0 0 0 0 0 0 0 0 0 0 0 20128 940 18338 168834;168835 134549;134550 134549 2 GQNVTEEECLEK Unmodified 1434.6297 0.62967334 4764 Q9NZD2 GLTP Glycolipid transfer protein yes yes 0 0 0 By MS/MS 10 0 1 1 30.807 30.46 2 0.00022953 33396 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 83.862 75.637 5141700 0 0 0 5141700 0 0 0 0 0 0 0 0 0 0 0 20129 4764 18339 168836 134551 134551 1 GQPAIIDGELYNEVK Unmodified 1644.8359 0.83590137 5087 Q9Y266 NUDC Nuclear migration protein nudC yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 6.41 3.94 9 1 12 2 6 2 1 1 1 1 1 1 1 1 1 1 1 1 77.472 75.884 2;3 0.00022828 88464 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 83.314 76.711 5735300000 36671000 4844500000 24260000 20892000 26289000 89289000 40144000 38166000 28612000 100420000 95947000 112460000 48785000 62312000 166480000 20130 5087 18340 168837;168838;168839;168840;168841;168842;168843;168844;168845;168846;168847;168848;168849;168850;168851;168852;168853;168854;168855;168856;168857;168858 134552;134553;134554;134555;134556;134557;134558;134559;134560;134561;134562;134563;134564;134565;134566;134567;134568 134567 16 GQPDEELKPK Unmodified 1139.5823 0.58225287 1740 P54577 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed yes yes 0 0 1 By MS/MS 2.33 0.471 2 1 3 19.723 17.224 3 0.005811 21337 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 70.1 46.781 1429400000 0 1429400000 0 0 0 0 0 0 0 0 0 0 0 0 0 20131 1740 18341 168859;168860;168861 134569;134570;134571;134572 134572 4 GQPDTVQDALR Unmodified 1198.5942 0.59421454 4386 Q9H3S7 PTPN23 Tyrosine-protein phosphatase non-receptor type 23 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 39.74 39.933 2 0.00028424 43305 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.178 76.461 63077000 0 0 0 3948900 3583400 0 5127400 5256800 1562300 6612600 7860000 10001000 6526500 6519200 6079200 20132 4386 18342 168862;168863;168864;168865;168866;168867;168868;168869;168870;168871;168872 134573;134574;134575;134576;134577;134578;134579 134574 7 GQPDVVVKEDEEYK Unmodified 1633.7835 0.78353145 1177 P24752 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 42.611 37.668 3 0.00015858 47044 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 82.102 80.638 52547000 0 52547000 0 0 0 0 0 0 0 0 0 0 0 0 0 20133 1177 18343 168873;168874 134580;134581 134581 2 GQPFDVGPR Unmodified 971.48248 0.48247924 1215 P27361 MAPK3 Mitogen-activated protein kinase 3 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 44.438 44.493 2 0.043239 50104 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 60.59 40.308 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20134 1215 18344 168875;168876 134582;134583 134582 2 GQPGHAYLETLK Unmodified 1312.6776 0.67755023 1517 P46939 UTRN Utrophin yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 50.887 44.904 3 0.004026 62158 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.157 45.126 39328000 33910000 0 5418200 0 0 0 0 0 0 0 0 0 0 0 0 20135 1517 18345 168877;168878 134584;134585;134586 134584 3 GQPIYIQFSNHK Unmodified 1430.7306 0.73064844 1208 P26599 PTBP1 Polypyrimidine tract-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 1 2 2 2 1 2 1 1 2 2 1 58.492 58.618 2;3 3.3247E-23 66791 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 150.35 120.61 1639300000 0 0 0 56197000 56325000 145780000 109250000 115960000 18899000 179560000 137160000 139730000 126720000 183550000 370150000 20136 1208 18346 168879;168880;168881;168882;168883;168884;168885;168886;168887;168888;168889;168890;168891;168892;168893;168894;168895;168896 134587;134588;134589;134590;134591;134592;134593;134594;134595;134596;134597;134598;134599;134600;134601;134602;134603;134604;134605 134590 12 GQPLGPAGVQVSLR Unmodified 1377.7728 0.7728476 1968 P69849;Q15155;Q5JPE7 NOMO3;NOMO1;NOMO2 Nodal modulator 3;Nodal modulator 1;Nodal modulator 2 yes no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 70.339 70.294 2 0.02737 80903 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 32.159 20.669 16724000 0 0 0 1259000 1938100 0 2320400 3252700 0 2487900 0 5466200 0 0 0 20137 1968 18347 168897;168898;168899;168900;168901;168902 134606;134607;134608 134606 3 GQPLPDHLQMAVQGK Unmodified 1617.8297 0.82971055 1656 P51532 SMARCA4 Transcription activator BRG1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 59.967 59.949 3 0.0036115 67731 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 38.995 29.002 73005000 0 0 0 7460500 7311000 7461300 6895500 7193200 0 0 12840000 0 12512000 11332000 0 20138 1656 18348 168903;168904;168905;168906;168907;168908;168909;168910 134609;134610;134611;134612;134613 134612 3 GQPLPETLQLAVQGK Unmodified 1577.8777 0.8777066 1655 P51531 SMARCA2 Probable global transcription activator SNF2L2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 1 2 2 2 80.645 80.701 2;3 8.8891E-28 93390 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 137.89 123.48 250160000 0 0 0 9231800 12270000 19831000 15455000 16779000 15377000 34214000 21459000 26868000 16451000 21847000 40381000 20139 1655 18349 168911;168912;168913;168914;168915;168916;168917;168918;168919;168920;168921;168922;168923;168924;168925;168926;168927;168928;168929;168930;168931;168932;168933 134614;134615;134616;134617;134618;134619;134620;134621;134622;134623;134624;134625;134626;134627 134620 13 GQPLPTPPAPPDPFK Unmodified 1557.8191 0.81912909 2898 Q6NUN9 ZNF746 Zinc finger protein 746 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 81.202 81.279 2 0.0029227 93369 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 45.829 34.678 17761000 0 0 0 0 2574500 0 2810900 3110400 2400000 0 0 0 3465900 3399100 0 20140 2898 18350 168934;168935;168936;168937;168938;168939;168940 134628;134629;134630;134631 134629 4 GQPREPQVYTLPPSREEMTK Unmodified 2342.1689 0.1688796 749 P01859 IGHG2 Ig gamma-2 chain C region no no 0 0 2 By MS/MS By MS/MS 10 0 4 2 2 52.825 52.582 3;4 0.00040661 59776 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 47.808 33.038 41148000 0 0 0 8882100 0 0 0 32266000 0 0 0 0 0 0 0 20141 749 18351 168941;168942;168943;168944 134632;134633;134634 134633 2 GQPSNKEDVDDLVSQLR Unmodified 1898.9334 0.93338358 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 71.234 71.359 3 0.0099026 82331 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 22.313 18.472 39581000 0 0 0 0 2712400 2609200 2718800 0 2155900 5316400 5980500 7949900 0 0 10137000 20142 965 18352 168945;168946;168947;168948;168949;168950;168951;168952 134635;134636;134637;134638;134639;134640 134638 6 GQPSNKEDVDDLVSQLRQTEEQVNDLK Unmodified 3083.5007 0.50071467 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 2 By MS/MS 2 0 1 1 91.798 83.667 4 1.4075E-10 108520 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.886 58.267 27435000 27435000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20143 965 18353 168953 134641 134641 1 GQPSSAEPEDAAGSR Unmodified 1457.6383 0.63826419 2092 Q03169 TNFAIP2 Tumor necrosis factor alpha-induced protein 2 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 16.197 16.436 2 0.010257 16544 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 48.004 33.797 4726500 0 0 0 0 0 1770200 0 0 0 0 0 2956300 0 0 0 20144 2092 18354 168954;168955 134642 134642 1 GQPVAPYNTTQFLMDDHDQEEPDLK Oxidation (M) 2903.292 0.29196744 615 O94992 HEXIM1 Protein HEXIM1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 2 1 6 1 2 1 1 1 1 1 1 77.321 75.574 3 6.2481E-120 90449 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 154.1 147.74 240060000 14558000 94031000 0 0 11247000 19854000 0 0 0 0 22442000 27946000 0 17222000 32761000 20145 615 18355 168956;168957;168958;168959;168960;168961;168962;168963;168964 134643;134644;134645;134646;134647;134648;134649;134650;134651 134646 754 9 GQPVAPYNTTQFLMDDHDQEEPDLK Unmodified 2887.2971 0.29705282 615 O94992 HEXIM1 Protein HEXIM1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 4 3.46 3 1 1 1 1 1 82.26 78.483 3 6.3671E-92 98307 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 142.32 140.31 214910000 23058000 170200000 5381200 0 0 0 0 0 0 0 0 0 0 0 16269000 20146 615 18355 168965;168966;168967;168968 134652;134653;134654;134655;134656 134652 5 GQQELLYVVPFVAK Unmodified 1589.8817 0.88172935 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91.805 91.345 2 0.00071205 105867 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 85.533 78.271 127030000 0 47381000 970890 962430 4126300 7549600 4270100 8786900 4661600 10522000 5849100 7085200 3921600 6550500 14392000 20147 19 18356 168969;168970;168971;168972;168973;168974;168975;168976;168977;168978;168979;168980;168981;168982 134657;134658;134659;134660;134661;134662;134663;134664;134665 134665 9 GQQLVMMPNK 2 Oxidation (M) 1176.5631 0.5631141 1014 P15170;Q8IYD1 GSPT1;GSPT2 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A;Eukaryotic peptide chain release factor GTP-binding subunit ERF3B yes no 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 23.44 22.552 2 0.00018777 24167 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 130.22 116.22 281330000 9267900 136680000 1796600 7042800 4625300 12710000 8235400 6046400 5532800 13608000 10625000 19588000 17311000 14800000 13462000 20148 1014 18357 168983;168984;168985;168986;168987;168988;168989;168990;168991;168992;168993;168994;168995;168996;168997;168998 134666;134667;134668;134669;134670;134671;134672;134673;134674;134675;134676;134677;134678;134679;134680;134681 134680 1406;1407 16 GQQLVMMPNK Oxidation (M) 1160.5682 0.56819948 1014 P15170;Q8IYD1 GSPT1;GSPT2 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A;Eukaryotic peptide chain release factor GTP-binding subunit ERF3B yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.54 3 3 2 21 1 4 2 2 1 2 2 2 2 2 2 2 2 38.932 38.175 2 0.00029811 47118 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 136.16 120.27 722690000 0 548070000 0 18131000 0 10112000 6838200 4839100 7696700 16651000 30651000 27900000 17409000 20612000 13779000 20149 1014 18357 168999;169000;169001;169002;169003;169004;169005;169006;169007;169008;169009;169010;169011;169012;169013;169014;169015;169016;169017;169018;169019;169020;169021;169022;169023;169024 134682;134683;134684;134685;134686;134687;134688;134689;134690;134691;134692;134693;134694;134695;134696;134697;134698;134699;134700;134701;134702;134703;134704;134705;134706;134707;134708;134709 134701 1406;1407 27 GQQLVMMPNK Unmodified 1144.5733 0.57328486 1014 P15170;Q8IYD1 GSPT1;GSPT2 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A;Eukaryotic peptide chain release factor GTP-binding subunit ERF3B yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6 4 3 3 1 1 1 1 1 1 52.314 50.592 2 0.00053592 65083 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.73 100.52 1426800000 0 1330500000 1443100 0 0 0 0 0 0 22942000 0 34055000 0 37821000 0 20150 1014 18357 169025;169026;169027;169028;169029;169030 134710;134711;134712;134713;134714 134711 5 GQQPEAIR Unmodified 897.46683 0.46682918 4777 Q9NZN4 EHD2 EH domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.188 14.351 2 0.0054586 13635 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 116.54 73.542 150390000 0 0 0 7481500 8722400 15711000 9042000 7027400 6593100 18209000 16619000 14988000 13940000 13411000 18643000 20151 4777 18358 169031;169032;169033;169034;169035;169036;169037;169038;169039;169040;169041;169042 134715;134716;134717;134718;134719;134720;134721;134722;134723;134724 134716 9 GQQRVEEAPVK Unmodified 1239.6571 0.65714914 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.08 14.243 3 0.031791 12999 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.664 22.545 61884000 0 0 0 3139500 2876500 4475100 3579900 2473100 3661800 7265600 5999900 7861500 7105400 4571000 8874300 20152 3443 18359 169043;169044;169045;169046;169047;169048;169049;169050;169051;169052;169053;169054 134725;134726 134725 2 GQQSAEEENFK Unmodified 1265.5524 0.5524093 2472 Q15014 MORF4L2 Mortality factor 4-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 17.746 17.972 2 0.00020504 18465 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 107.15 85.69 52526000 0 0 0 4996800 0 5481900 5249700 3318400 3581900 4252000 4811100 6526900 2986300 2967100 8353900 20153 2472 18360 169055;169056;169057;169058;169059;169060;169061;169062;169063;169064;169065;169066 134727;134728;134729;134730;134731;134732;134733;134734;134735;134736;134737;134738 134727 12 GQQVFLK Unmodified 818.46504 0.46503826 1126 P21399;O00408 ACO1;PDE2A Cytoplasmic aconitate hydratase;cGMP-dependent 3',5'-cyclic phosphodiesterase yes no 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 39.955 34.502 2 0.02854 43148 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 95.957 56.739 558360000 66298000 492060000 0 0 0 0 0 0 0 0 0 0 0 0 0 20154 1126 18361 169067;169068;169069 134739;134740;134741;134742 134742 4 GQQVIEEQR Unmodified 1085.5465 0.54653606 3156 Q86UU1 PHLDB1 Pleckstrin homology-like domain family B member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 17.458 17.431 2 0.0051431 17542 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 82.279 40.849 6471400 0 0 0 0 1653700 2474200 0 0 0 2343400 0 0 0 0 0 20155 3156 18362 169070;169071;169072;169073;169074;169075 134743;134744;134745;134746;134747;134748 134748 6 GQRASLEAAIADAEQRGELAIK Unmodified 2296.2135 0.21352161 67;51 CON__H-INV:HIT000292931;CON__P05787;P05787 KRT8 Keratin, type II cytoskeletal 8 no no 0 0 2 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 87.469 81.793 4 0.00051841 105048 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.127 36.831 + 29957000 5167400 24790000 0 0 0 0 0 0 0 0 0 0 0 0 0 20156 51;67 18363 169076;169077 134749;134750 134750 2 GQREEVEQMK Oxidation (M) 1248.5768 0.57684991 4771 Q9NZL4 HSPBP1 Hsp70-binding protein 1 yes yes 0 1 1 By MS/MS 10 0 1 1 5.8341 6.1622 3 0.017793 3465 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.597 47.364 50336000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50336000 20157 4771 18364 169078 134751 134751 6137 0 GQSDVLLSTTSK Unmodified 1234.6405 0.64049603 2973 Q6ULP2 AFTPH Aftiphilin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 41.6 41.932 2 0.0049017 46900 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 56.043 32.013 49193000 0 0 0 0 0 4664500 3372400 0 3165900 6525000 4755900 8296100 4884700 5121200 8407100 20158 2973 18365 169079;169080;169081;169082;169083;169084;169085;169086;169087;169088 134752;134753;134754;134755;134756;134757;134758;134759;134760 134754 9 GQSEDNFLR Unmodified 1064.4887 0.48868683 5098 Q9Y2D9 ZNF652 Zinc finger protein 652 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching 10 0 14 1 1 1 2 2 1 1 1 1 1 1 1 36.887 37.057 2 0.0034509 41278 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 106.36 80.462 118310000 0 0 0 4579600 7538500 5043200 9765600 11081000 6070500 8934700 12431000 16661000 16720000 6762300 12727000 20159 5098 18366 169089;169090;169091;169092;169093;169094;169095;169096;169097;169098;169099;169100;169101;169102 134761;134762;134763;134764 134761 4 GQSEDPGSLLSLFR Unmodified 1504.7522 0.75217174 860 P08195 SLC3A2 4F2 cell-surface antigen heavy chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 92.243 92.386 2 7.3715E-12 107058 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 102.4 78.796 57103000 0 0 0 0 0 0 2513800 4746000 0 13447000 5620600 6903600 4030000 5452000 14391000 20160 860 18367 169103;169104;169105;169106;169107;169108;169109;169110 134765;134766;134767;134768;134769;134770;134771;134772;134773 134767 9 GQSEEIQK Unmodified 917.44543 0.44542503 2006 P83731 RPL24 60S ribosomal protein L24 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.8119 6.9355 2 0.0068442 4668 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 94.262 70.29 116140000 0 0 0 6725800 11198000 18425000 14974000 12162000 17746000 5699500 7747700 5276600 5065100 3908700 7214800 20161 2006 18368 169111;169112;169113;169114;169115;169116;169117;169118;169119;169120;169121;169122 134774;134775;134776;134777;134778;134779;134780;134781;134782;134783;134784 134777 11 GQSFFIDAPDSPATLAYR Unmodified 1954.9425 0.94249171 1713 P53384 NUBP1 Cytosolic Fe-S cluster assembly factor NUBP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 85.664 85.821 2 2.5967E-05 99286 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.866 81.99 57608000 0 0 0 0 0 0 3471800 0 0 10380000 9922600 10041000 0 0 23793000 20162 1713 18369 169123;169124;169125;169126;169127;169128 134785;134786;134787;134788;134789 134788 5 GQSGELAAASGK Unmodified 1074.5306 0.53055165 5201 Q9Y4G6 TLN2 Talin-2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 14.958 15.316 2 0.0033459 14035 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.641 23.083 16640000 0 0 0 0 0 0 0 0 0 0 0 3702200 3649700 4076000 5211900 20163 5201 18370 169129;169130;169131;169132 134790;134791 134790 2 GQSGIIYCFSQK Unmodified 1386.6602 0.66018561 1496 P46063 RECQL ATP-dependent DNA helicase Q1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.12 3.72 2 1 5 1 2 1 1 1 1 1 67.937 65.832 2 0.00012798 84156 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.254 80.029 214510000 93886000 56325000 0 0 0 0 0 0 0 0 23080000 18433000 3624600 6573500 12588000 20164 1496 18371 169133;169134;169135;169136;169137;169138;169139;169140 134792;134793;134794;134795;134796;134797;134798 134792 4 GQSGLVWR Unmodified 901.477 0.47699993 78 CON__P20930;P20930 FLG Filaggrin yes no 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 45.666 45.549 2 0.029462 51804 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 56.122 30.013 + 13368000 0 0 0 6470300 0 0 4121600 0 0 2776200 0 0 0 0 0 20165 78 18372 169141;169142;169143 134799 134799 1 GQSPLHILGQYGK Unmodified 1396.7463 0.7462985 4825 Q9P2R3 ANKFY1 Rabankyrin-5 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS 10 0 4 1 1 1 1 65.879 66.074 3 0.02277 74844 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 26.124 24.189 11622000 0 0 0 0 0 2977600 1002400 0 0 1764000 0 0 0 0 5878000 20166 4825 18373 169144;169145;169146;169147 134800 134800 1 GQSSLALHK Unmodified 939.51378 0.51377937 941 P11234 RALB Ras-related protein Ral-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 19.983 16.319 2 0.024253 23715 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.501 37.498 52108000 29205000 18390000 4513400 0 0 0 0 0 0 0 0 0 0 0 0 20167 941 18374 169148;169149;169150 134801 134801 1 GQTADIIEDK Unmodified 1088.535 0.53496832 5383 yes yes 0 0 0 By MS/MS 2.5 0.5 2 2 4 14.767 11.363 2 0.0023352 14113 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 106.04 48.761 + 38884000 0 38884000 0 0 0 0 0 0 0 0 0 0 0 0 0 20168 5383 18375 169151;169152;169153;169154 134802;134803;134804;134805 134805 3 GQTAYQRK Unmodified 950.49338 0.49337828 2834;2390;4862;2758 Q9UBW7;Q9UJ78;Q5VZL5;Q14202;Q5SVZ6 ZMYM2;ZMYM5;ZMYM4;ZMYM3;ZMYM1 Zinc finger MYM-type protein 2;Zinc finger MYM-type protein 5;Zinc finger MYM-type protein 4;Zinc finger MYM-type protein 3;Zinc finger MYM-type protein 1 no no 0 0 1 By MS/MS 2 0 1 1 1.8423 -1.4523 2 0.038152 1613 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 111.65 70.146 57856000 57856000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20169 4862;2834;2390;2758 18376 169155 134806 134806 1 GQTEHDEGMLEYLEDIIGCGRLNEPIK Unmodified 3115.459 0.45904955 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 0 1 By MS/MS 2 0 1 1 100.04 91.91 3 1.4148E-29 118468 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 92.198 82.401 9854600 9854600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20170 4634 18377 169156 134807 134807 1 GQTEQLELENSR Unmodified 1402.6688 0.66883604 3964 Q96R06 SPAG5 Sperm-associated antigen 5 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 37.548 37.702 2 2.8574E-115 41280 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 213.34 167.19 172750000 0 0 0 10389000 9885300 13588000 15645000 14394000 11774000 16498000 0 23328000 17883000 15636000 23733000 20171 3964 18378 169157;169158;169159;169160;169161;169162;169163;169164;169165;169166;169167 134808;134809;134810;134811;134812;134813;134814;134815 134814 7 GQTGGDVNVEMDAAPGVDLSR Oxidation (M) 2102.9539 0.95386103 70 CON__P08779;P08779;CON__Q9Z2K1;CON__Q3ZAW8 KRT16 Keratin, type I cytoskeletal 16 yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 1 2 2 2 2 2 2 2 2 2 1 60.866 61.014 2;3 1.1828E-66 69521 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 145.69 131.43 + 794020000 0 0 0 87203000 23334000 28753000 99838000 78354000 21873000 57966000 31876000 40062000 288360000 27366000 9036400 20172 70 18379 169168;169169;169170;169171;169172;169173;169174;169175;169176;169177;169178;169179;169180;169181;169182;169183;169184;169185;169186;169187;169188 134816;134817;134818;134819;134820;134821;134822;134823;134824;134825;134826;134827;134828 134826 86 12 GQTGGDVNVEMDAAPGVDLSR Unmodified 2086.9589 0.95894641 70 CON__P08779;P08779;CON__Q9Z2K1;CON__Q3ZAW8 KRT16 Keratin, type I cytoskeletal 16 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.912 71.981 2 1.7304E-66 81889 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 182.1 159.38 + 170270000 0 0 0 6438700 6278600 4968800 3516700 17931000 4652000 22318000 12132000 10390000 66380000 10986000 4279000 20173 70 18379 169189;169190;169191;169192;169193;169194;169195;169196;169197;169198;169199;169200 134829;134830;134831;134832;134833;134834;134835;134836;134837;134838;134839;134840;134841;134842 134837 14 GQTIPEDILGK Unmodified 1169.6292 0.62920306 1688 P52564 MAP2K6 Dual specificity mitogen-activated protein kinase kinase 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69.984 69.104 2 0.0080158 78856 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 52.579 28.81 603800000 9829900 458670000 0 6715900 6039200 12797000 8933000 8767300 5866800 12697000 15009000 12702000 8858200 12897000 24019000 20174 1688 18380 169201;169202;169203;169204;169205;169206;169207;169208;169209;169210;169211;169212;169213;169214 134843;134844;134845;134846;134847 134844 5 GQTLDGTFLR Unmodified 1106.572 0.57202253 3004 Q6ZRI6 C15orf39 Uncharacterized protein C15orf39 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 60.761 61.045 2 0.023046 69290 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 45.74 29.282 34513000 0 0 0 0 0 4270900 0 0 0 4185900 5601000 4964900 4553200 4320300 6617000 20175 3004 18381 169215;169216;169217;169218;169219;169220;169221 134848;134849;134850 134850 3 GQTLTLTQQQR Unmodified 1272.6786 0.67861287 2027 P98194 ATP2C1 Calcium-transporting ATPase type 2C member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 34.878 34.996 2 0.010339 39121 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 63.184 36.742 37358000 0 0 0 4069400 2786400 0 4063700 3936000 0 0 9951100 8275000 0 4276100 0 20176 2027 18382 169222;169223;169224;169225;169226;169227;169228 134851;134852;134853 134853 3 GQTLVVQFTVK Unmodified 1218.6972 0.69722304 1225 P27797 CALR Calreticulin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.5 0.5 2 2 2 1 1 80.493 76.044 2 0.00068609 77486 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 96.89 89.83 57318000 48213000 4406600 4698600 0 0 0 0 0 0 0 0 0 0 0 0 20177 1225 18383 169229;169230;169231;169232 134854;134855;134856;134857;134858;134859;134860;134861;134862;134863 134856 10 GQTPFAGTQDK Unmodified 1148.5462 0.54620171 202 O14686 KMT2D Histone-lysine N-methyltransferase 2D yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 25.19 25.323 2 0.00022441 25630 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 121.83 97.675 47272000 0 0 0 6157900 0 6011700 5883000 6296300 0 7140800 0 0 0 0 15782000 20178 202 18384 169233;169234;169235;169236;169237;169238 134864;134865;134866 134864 3 GQTPGGAQFVGLELYK Unmodified 1663.857 0.85697116 2328 Q13616 CUL1 Cullin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 82.37 81.343 2 1.9702E-20 94292 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 111.79 80.921 373950000 9678500 257350000 0 4920900 2859500 17730000 5043100 4508300 5156700 12715000 10289000 9486300 3726800 6959700 23518000 20179 2328 18385 169239;169240;169241;169242;169243;169244;169245;169246;169247;169248;169249;169250;169251;169252;169253 134867;134868;134869;134870;134871;134872;134873;134874;134875;134876;134877;134878;134879;134880;134881;134882;134883 134867 17 GQTQDEISR Unmodified 1032.4836 0.48360145 3123 Q7Z7F0 KIAA0907 UPF0469 protein KIAA0907 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 10.466 10.583 2 0.0037823 9214 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 88.948 53.068 48891000 0 0 0 3635500 2596200 4055200 4593500 3053700 3061400 4251600 0 4935200 4559800 5161500 8987700 20180 3123 18386 169254;169255;169256;169257;169258;169259;169260;169261;169262;169263;169264 134884;134885 134884 1 GQTSTYGFLK Unmodified 1100.5502 0.55022446 3997 Q96T37 RBM15 Putative RNA-binding protein 15 yes yes 0 0 0 By MS/MS 10 0 1 1 53.213 53.288 2 0.050636 60416 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 52.255 38.877 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20181 3997 18387 169265 134886 134886 1 GQTVNAGVAER Unmodified 1100.5574 0.5574351 133 O00255 MEN1 Menin yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 19.527 19.636 2 0.013168 20255 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 46.819 25.371 8806700 0 0 0 0 963820 1655300 923490 0 0 0 2581500 0 2682500 0 0 20182 133 18388 169266;169267;169268;169269;169270 134887 134887 1 GQTVNEDSMDVK Oxidation (M) 1337.5769 0.57690949 5073 Q9UQR0 SCML2 Sex comb on midleg-like protein 2 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 13.961 14.035 2 0.0036904 13299 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 53.756 33.236 14887000 0 0 0 1356800 1626900 1803500 1557600 1387000 0 2171800 0 2695700 2287600 0 0 20183 5073 18389 169271;169272;169273;169274;169275;169276;169277;169278 134888;134889;134890;134891 134891 6450 4 GQVCLPVISAENWK Unmodified 1599.8079 0.80791248 1959 P68036;A0A1B0GUS4 UBE2L3 Ubiquitin-conjugating enzyme E2 L3 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 85.152 83.812 2 3.8958E-30 104293 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145.91 120.48 450240000 4204600 337020000 1886600 0 0 10816000 0 5375200 7359200 9462600 11837000 12970000 5119100 9720700 34466000 20184 1959 18390 169279;169280;169281;169282;169283;169284;169285;169286;169287;169288;169289;169290;169291 134892;134893;134894;134895;134896;134897;134898;134899;134900;134901;134902;134903;134904;134905;134906;134907 134895 16 GQVCLPVISAENWKPATK Unmodified 1997.0404 0.040431612 1959 P68036;A0A1B0GUS4 UBE2L3 Ubiquitin-conjugating enzyme E2 L3 yes no 0 0 1 By MS/MS 2 0 1 1 86.524 78.393 3 0.0031646 102126 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 44.089 40.428 21319000 21319000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20185 1959 18391 169292 134908 134908 1 GQVFDVGPR Unmodified 973.49813 0.49812931 1236 P28482 MAPK1 Mitogen-activated protein kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.196 48.358 2 0.0045924 54320 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 86.332 62.311 420760000 0 0 0 23796000 21925000 42688000 25315000 20277000 20739000 39666000 38355000 38165000 40933000 39241000 69655000 20186 1236 18392 169293;169294;169295;169296;169297;169298;169299;169300;169301;169302;169303;169304 134909;134910;134911;134912 134909 2 GQVGGDVNVEMDAAPGVDLSR Oxidation (M) 2100.9746 0.97459647 56 CON__P02533;P02533 KRT14 Keratin, type I cytoskeletal 14 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 2 2 2 2 2 2 2 1 2 1 1 66.121 66.198 2;3 5.2931E-98 74820 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 176.23 168.13 + 1280100000 0 0 0 121080000 92129000 127050000 72850000 173150000 69128000 131880000 125500000 73942000 206680000 56456000 30255000 20187 56 18393 169305;169306;169307;169308;169309;169310;169311;169312;169313;169314;169315;169316;169317;169318;169319;169320;169321;169322;169323;169324 134913;134914;134915;134916;134917;134918;134919;134920;134921;134922;134923;134924;134925;134926;134927;134928;134929;134930;134931;134932;134933 134926 56 13 GQVGGEINVEMDAAPGVDLSR Oxidation (M) 2129.0059 0.005896599 84 CON__Q04695;Q04695 KRT17 Keratin, type I cytoskeletal 17 no no 0 1 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 72.627 72.609 2 2.728E-47 83956 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 112.72 105.36 + 36159000 0 0 0 4948800 3174300 0 4178800 3269000 0 5532400 0 6859700 8196500 0 0 20188 84 18394 169325;169326;169327;169328;169329;169330;169331 134934;134935;134936;134937;134938;134939 134935 121 6 GQVGPGAGPLELEGVK Unmodified 1506.8042 0.80420731 2874 Q6EMK4 VASN Vasorin yes yes 0 0 0 By MS/MS 2 0 1 1 77.174 72.337 2 0.0018396 90399 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.663 70.982 17269000 0 17269000 0 0 0 0 0 0 0 0 0 0 0 0 0 20189 2874 18395 169332 134940 134940 0 GQVINLDQLHSSWK Unmodified 1623.8369 0.83690442 2841 Q658Y4 FAM91A1 Protein FAM91A1 yes yes 0 0 0 By MS/MS 2 0 1 1 81.095 72.965 3 0.0043134 95731 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.727 30.481 24188000 24188000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20190 2841 18396 169333 134941 134941 1 GQVLNIQMR Unmodified 1057.5702 0.57024839 811 P05455 SSB Lupus La protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 57.427 57.774 2 0.0030241 65996 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 91.626 71.488 111860000 0 0 0 0 0 0 7118900 0 0 0 16972000 19692000 14485000 15118000 38477000 20191 811 18397 169334;169335;169336;169337;169338;169339 134942;134943;134944;134945;134946 134945 5 GQVPMQDPR Oxidation (M) 1042.4866 0.48657834 1329 P33240 CSTF2 Cleavage stimulation factor subunit 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 13.668 13.857 2 0.024017 13626 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 45.68 25.977 32241000 0 0 0 0 2941200 3157100 2138000 1538400 2291000 5167200 2470400 2383800 3641700 3420700 3091300 20192 1329 18398 169340;169341;169342;169343;169344;169345;169346;169347;169348;169349;169350 134947 134947 1 GQVPMQDPR Unmodified 1026.4917 0.49166372 1329 P33240 CSTF2 Cleavage stimulation factor subunit 2 yes yes 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 26.296 26.432 2 0.0079891 26978 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 70.919 45.182 84922000 0 0 0 5209000 5805700 8113300 5711600 7614500 0 10465000 15202000 0 0 8638200 18162000 20193 1329 18398 169351;169352;169353;169354;169355;169356;169357;169358;169359 134948;134949 134949 2 GQVPPLVTTNFLVK Unmodified 1511.8712 0.87116466 1729 P53992 SEC24C Protein transport protein Sec24C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 86.607 86.662 2 0.017344 100636 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 51.979 39.765 76605000 0 0 0 2350600 3697600 7391200 4332000 5297800 0 9283900 8968000 12085000 0 8396100 14803000 20194 1729 18399 169360;169361;169362;169363;169364;169365;169366;169367;169368;169369;169370 134950;134951;134952;134953;134954;134955 134954 6 GQVRLSK Unmodified 786.47119 0.47118627 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 9.791 6.7367 2 0.018311 11326 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 152.63 72.34 426920000 423750000 0 3169600 0 0 0 0 0 0 0 0 0 0 0 0 20195 894 18400 169371;169372 134956 134956 0 GQVSEGGQLR Unmodified 1029.5203 0.52032131 3916 Q96L92 SNX27 Sorting nexin-27 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 15.422 15.52 2 0.011593 15247 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 53.968 4.5263 43750000 0 0 0 2557200 1794800 4118100 4332300 0 2280800 0 10225000 0 8559800 9881900 0 20196 3916 18401 169373;169374;169375;169376;169377;169378;169379;169380 134957;134958;134959;134960;134961;134962 134962 6 GQVSESEDSITK Unmodified 1278.5939 0.59393976 632 O95239 KIF4A Chromosome-associated kinesin KIF4A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.958 22.166 2 2.2784E-05 22077 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 117.67 108.09 168840000 0 0 0 10472000 9100800 12800000 15929000 10059000 11611000 18168000 16742000 17656000 13888000 15679000 16733000 20197 632 18402 169381;169382;169383;169384;169385;169386;169387;169388;169389;169390;169391;169392 134963;134964;134965;134966;134967;134968;134969;134970;134971;134972;134973 134965 11 GQVSQETLSEEASSQATLPNQPVEK Unmodified 2656.2828 0.28278297 4669 Q9NVI1 FANCI Fanconi anemia group I protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 1 2 1 1 1 1 2 1 2 1 65.233 65.355 2;3 1.5897E-92 74094 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 140.2 135.65 217440000 0 0 0 7201700 16023000 17450000 16835000 13346000 12477000 18992000 23358000 34580000 13526000 22900000 20749000 20198 4669 18403 169393;169394;169395;169396;169397;169398;169399;169400;169401;169402;169403;169404;169405;169406;169407 134974;134975;134976;134977;134978;134979;134980;134981;134982;134983;134984;134985;134986;134987;134988;134989;134990 134984 17 GQVVENNSVTEFSEEK Unmodified 1794.8272 0.82718718 4197 Q9BVS4 RIOK2 Serine/threonine-protein kinase RIO2 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 55.237 49.422 2 2.6146E-66 63901 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 191.26 175.67 33429000 0 33429000 0 0 0 0 0 0 0 0 0 0 0 0 0 20199 4197 18404 169408;169409 134991;134992 134991 2 GQVVSLIR Unmodified 870.5287 0.52870115 841 P07384 CAPN1 Calpain-1 catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 51.871 52.08 2 0.0053152 58916 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 107.32 69.166 647880000 0 0 0 44554000 0 42366000 53089000 42789000 36567000 62394000 80290000 90653000 57923000 0 137260000 20200 841 18405 169410;169411;169412;169413;169414;169415;169416;169417;169418;169419 134993;134994;134995;134996;134997;134998;134999;135000;135001;135002 134999 9 GQVYILGR Unmodified 904.51305 0.51305109 737 P00966 ASS1 Argininosuccinate synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.39 51.539 2 0.012535 58573 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 74.415 51.267 1663600000 0 0 0 38122000 48765000 72695000 64469000 67490000 41179000 89128000 263860000 199780000 70046000 193150000 514930000 20201 737 18406 169420;169421;169422;169423;169424;169425;169426;169427;169428;169429;169430;169431 135003;135004;135005;135006;135007;135008 135004 5 GQYFGELALVTNK Unmodified 1438.7456 0.7456298 990 P13861;P31323 PRKAR2A;PRKAR2B cAMP-dependent protein kinase type II-alpha regulatory subunit;cAMP-dependent protein kinase type II-beta regulatory subunit yes no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 81.652 81.067 2 0.0021198 100958 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.353 83.674 59995000 0 21151000 3446500 0 1179600 4199300 0 2227400 0 4393000 2937300 4652900 2062400 3718600 10027000 20202 990 18407 169432;169433;169434;169435;169436;169437;169438;169439;169440;169441;169442 135009;135010;135011 135010 3 GQYHTLQAGFSSR Unmodified 1450.6953 0.69532556 5182 Q9Y446 PKP3 Plakophilin-3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 38.686 38.825 3 0.002696 43078 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 39.033 22.896 117080000 0 0 0 8581100 6318600 0 10998000 12956000 6316300 10695000 16545000 0 14656000 12680000 17339000 20203 5182 18408 169443;169444;169445;169446;169447;169448;169449;169450;169451;169452 135012;135013;135014 135013 3 GQYISPFHDIPIYADK Unmodified 1862.9203 0.9202997 2505 Q15181 PPA1 Inorganic pyrophosphatase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 5.47 3.87 9 2 8 4 5 2 1 1 1 1 2 1 1 85.197 82.807 2;3 1.6659E-37 103224 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 153.09 136.32 3393700000 1509000000 1587000000 117540000 0 0 0 0 8035600 3194700 10316000 15358000 14977000 0 9234300 119030000 20204 2505 18409 169453;169454;169455;169456;169457;169458;169459;169460;169461;169462;169463;169464;169465;169466;169467;169468;169469;169470;169471 135015;135016;135017;135018;135019;135020;135021;135022;135023;135024;135025;135026;135027;135028;135029;135030;135031;135032;135033 135019 18 GQYQDHAIDRR Unmodified 1357.6487 0.64870972 2377 Q14151 SAFB2 Scaffold attachment factor B2 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.228 11.365 3 0.00030046 10624 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 76.228 67.274 57057000 0 0 0 3216200 288650 4843900 5161400 4030600 4874600 0 4471000 11333000 9004800 8464100 1369000 20205 2377 18410 169472;169473;169474;169475;169476;169477;169478;169479;169480;169481;169482 135034;135035;135036;135037;135038;135039;135040 135038 7 GRADTGLETSTR Unmodified 1262.6215 0.62149192 1614 P49959 MRE11A Double-strand break repair protein MRE11A yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 15 1 1 1 1 1 1 1 1 1 2 2 2 13.364 13.547 2;3 0.018965 13035 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 80.979 63.749 118690000 0 0 0 2254400 2721900 4223200 3657700 2443100 3396200 4841600 4355300 8397300 27943000 19336000 35123000 20206 1614 18411 169483;169484;169485;169486;169487;169488;169489;169490;169491;169492;169493;169494;169495;169496;169497 135041;135042;135043 135043 1 GRARQYTSPEEIDAQLQAEK Unmodified 2289.1349 0.13493694 2292 Q13442 PDAP1 28 kDa heat- and acid-stable phosphoprotein yes yes 0 0 2 By MS/MS 2 0 1 1 63.368 55.1 3 9.1219E-09 74321 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.479 49.367 9845300 9845300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20207 2292 18412 169498 135044 135044 1 GRASLTQEK Unmodified 988.53016 0.53015772 1534 P48163 ME1 NADP-dependent malic enzyme yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 8.0502 5.0156 2 0.03001 8615 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 112.8 43.887 273750000 261550000 9823200 2373600 0 0 0 0 0 0 0 0 0 0 0 0 20208 1534 18413 169499;169500;169501 135045 135045 1 GRASSHSSQTQGGGSVTK Unmodified 1730.8296 0.82958721 757 P02545 LMNA Prelamin-A/C;Lamin-A/C yes yes 0 0 1 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching 10 0 8 1 1 1 1 1 1 1 1 5.5204 5.6486 4 0.032747 3347 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 25.611 18.707 42106000 0 0 0 7113000 4240800 0 7923500 0 0 6463300 4655900 0 2820300 1066300 7822400 20209 757 18414 169502;169503;169504;169505;169506;169507;169508;169509 135046 135046 1 GRAVMISAIEK Unmodified 1173.654 0.65397802 2528 Q15393 SF3B3 Splicing factor 3B subunit 3 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 46.096 45.624 3 0.0064666 51016 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 50.354 32.534 130940000 31061000 0 0 2667200 3884500 3998700 5527500 7343100 4836400 6602700 10888000 14026000 6556600 9132700 24415000 20210 2528 18415 169510;169511;169512;169513;169514;169515;169516;169517;169518;169519;169520;169521;169522 135047;135048;135049;135050;135051;135052 135049 6 GRDAFPVAGQK Unmodified 1144.5989 0.59890598 1745 P54725 RAD23A UV excision repair protein RAD23 homolog A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 6.5 3.92 7 1 10 2 3 3 1 1 1 1 1 1 1 1 1 1 29.011 27.136 2;3 0.000382 34904 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 142 99.886 925380000 716260000 52637000 40325000 11719000 4294800 5472900 8463000 9174800 4436300 8301800 29991000 800280 0 33499000 0 20211 1745 18416 169523;169524;169525;169526;169527;169528;169529;169530;169531;169532;169533;169534;169535;169536;169537;169538;169539;169540 135053;135054;135055;135056;135057;135058;135059;135060;135061;135062;135063;135064;135065;135066;135067;135068 135066 13 GRDIVVLGVEK Unmodified 1183.6925 0.69247202 219 O14818 PSMA7 Proteasome subunit alpha type-7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 25 3 1 2 2 2 1 2 3 3 2 2 2 52.061 52.225 2;3 0.0035126 60047 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 59.57 39.283 479630000 0 0 0 25730000 6627700 18684000 21758000 16103000 12921000 22770000 26888000 94654000 16168000 50772000 166560000 20212 219 18417 169541;169542;169543;169544;169545;169546;169547;169548;169549;169550;169551;169552;169553;169554;169555;169556;169557;169558;169559;169560;169561;169562;169563;169564;169565 135069;135070;135071;135072;135073;135074;135075;135076;135077;135078;135079;135080;135081;135082;135083 135083 14 GRDPVEILIPK Unmodified 1235.7238 0.72377215 3047 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 2 1 1 1 1 1 1 1 1 1 1 1 1 73.386 72.665 3 0.00082936 82461 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.695 60.819 382610000 81175000 0 26089000 16128000 12565000 31496000 20415000 20949000 25739000 0 25669000 34523000 28596000 22041000 37224000 20213 3047 18418 169566;169567;169568;169569;169570;169571;169572;169573;169574;169575;169576;169577;169578;169579 135084;135085;135086;135087;135088;135089;135090;135091;135092;135093;135094;135095 135086 12 GRDVESVQTPSK Unmodified 1301.6575 0.65754307 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.307 16.482 3 0.00017785 16751 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 83.204 70.627 122380000 0 0 0 6129700 6852900 11670000 7972100 10045000 5916000 9321600 11362000 13248000 13752000 11633000 14482000 20214 1492 18419 169580;169581;169582;169583;169584;169585;169586;169587;169588;169589;169590;169591 135096;135097;135098;135099;135100;135101;135102;135103;135104;135105;135106;135107;135108 135108 12 GRDVIAQSQSGTGK Unmodified 1402.7165 0.71645494 1400 P38919 EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 6 24 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 13.096 12.568 2;3 7.4688E-148 11436 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 234.52 212.43 2822700000 1439500000 241250000 333280000 33530000 48659000 74498000 71425000 71000000 48171000 91859000 73792000 96262000 57202000 54971000 87270000 20215 1400 18420 169592;169593;169594;169595;169596;169597;169598;169599;169600;169601;169602;169603;169604;169605;169606;169607;169608;169609;169610;169611;169612;169613;169614;169615;169616;169617;169618;169619;169620;169621 135109;135110;135111;135112;135113;135114;135115;135116;135117;135118;135119;135120;135121;135122;135123;135124;135125;135126;135127;135128;135129;135130;135131 135128 17 GREEESDQIREK Unmodified 1474.7012 0.7011988 3642 Q92620 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 yes yes 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 9.7277 6.6733 3 0.00072302 8488 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 90.412 75.312 40783000 14143000 0 26641000 0 0 0 0 0 0 0 0 0 0 0 0 20216 3642 18421 169622;169623 135132 135132 1 GREEHYEEEEEEEEDGAAVAEK Unmodified 2563.047 0.04702895 158 O00461 GOLIM4 Golgi integral membrane protein 4 yes yes 0 0 1 By MS/MS 2 0 2 2 39.494 32.871 3;4 2.1653E-28 45754 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.557 82.825 10232000 10232000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20217 158 18422 169624;169625 135133;135134 135134 2 GREEINFVEIK Unmodified 1332.7038 0.70376498 3653 Q92733 PRCC Proline-rich protein PRCC yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 61.779 62.066 3 0.0003086 70972 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 84.605 61.379 205660000 0 0 0 0 0 0 0 14210000 23510000 23024000 26107000 21621000 18500000 27365000 51317000 20218 3653 18423 169626;169627;169628;169629;169630;169631;169632;169633 135135;135136;135137;135138;135139;135140 135135 5 GREEWESAALQNANTK Unmodified 1802.8547 0.85473933 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 1 By matching By matching By matching By matching By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 47.683 47.932 3 0.0048354 53334 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 25.611 15.954 45772000 0 0 0 0 0 7509100 3704900 2779100 0 9901600 0 0 6693300 7315500 7868100 20219 2775 18424 169634;169635;169636;169637;169638;169639;169640 135141;135142 135142 2 GREEYEGPNK Unmodified 1177.5364 0.53636531 1151 P23246 SFPQ Splicing factor, proline- and glutamine-rich yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 7.9238 8.0743 3 0.0035148 6468 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.347 49.46 110460000 0 0 0 0 5223200 8891900 8908300 6345500 6175100 6330900 19624000 16582000 8899200 8086400 15396000 20220 1151 18425 169641;169642;169643;169644;169645;169646;169647;169648;169649;169650;169651 135143;135144;135145;135146 135145 4 GREFSFEAWNAK Unmodified 1440.6786 0.67861287 1977 P78347 GTF2I General transcription factor II-I yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.176 68.258 3 5.9715E-05 77334 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.46 65.861 212260000 0 0 0 4988300 2799000 25811000 4912000 12419000 17858000 16681000 10197000 24037000 14958000 15965000 61635000 20221 1977 18426 169652;169653;169654;169655;169656;169657;169658;169659;169660;169661;169662;169663 135147;135148;135149;135150;135151;135152;135153;135154;135155;135156;135157;135158;135159 135152 13 GREGPVQFEEDPFGLDK Unmodified 1918.9061 0.9061062 2320 Q13573 SNW1 SNW domain-containing protein 1 yes yes 0 0 1 By matching By MS/MS By MS/MS 10 0 3 1 1 1 77.8 78.009 3 0.00042322 89670 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.327 53.35 43464000 0 0 0 0 0 0 2894900 0 0 0 7950200 0 0 0 32619000 20222 2320 18427 169664;169665;169666 135160;135161 135160 2 GRELPTAFDYVEFTR Unmodified 1799.8842 0.88424855 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS 10 0 1 1 82.103 82.305 3 0.00084117 94925 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.14 40.425 7775900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7775900 20223 2344 18428 169667 135162 135162 1 GREQDLILAVK Unmodified 1240.7139 0.71393574 3588 Q8WXE0 CASKIN2 Caskin-2 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 57.263 57.675 3 0.0018234 64755 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.019 26.469 19074000 0 0 0 0 0 0 0 0 0 0 0 0 7674300 0 11399000 20224 3588 18429 169668;169669 135163;135164 135163 2 GRESVLIISTDPAHNISDAFDQK Unmodified 2512.2558 0.25578035 353 O43681 ASNA1 ATPase ASNA1 yes yes 0 0 1 By MS/MS 2 0 1 1 86.529 78.398 4 2.0033E-13 102156 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.885 75.346 28264000 28264000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20225 353 18430 169670 135165 135165 1 GREYGYASLHK Unmodified 1279.6309 0.63093439 199 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 yes yes 0 0 1 By matching By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 23.399 23.556 3 0.042118 25083 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 25.014 18.721 16700000 0 0 0 3141300 0 3282600 0 0 0 4663000 0 0 0 0 5612900 20226 199 18431 169671;169672;169673;169674 135166 135166 1 GRFPESSAVQSSSFER Unmodified 1769.8333 0.83327561 4697 Q9NWH9 SLTM SAFB-like transcription modulator yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 48.314 48.295 3 0.0079292 54104 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 21.881 17.104 42426000 0 0 0 0 11831000 8035100 9744600 0 5171900 7643800 0 0 0 0 0 20227 4697 18432 169675;169676;169677;169678;169679 135167;135168 135168 2 GRGFGSEEGSR Unmodified 1137.5163 0.51629857 5248 Q9Y5S9 RBM8A RNA-binding protein 8A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 2 1 1 2 8.652 8.8102 2;3 0.00038693 6234 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 67.385 59.905 85433000 0 0 0 2237500 3819200 2837400 0 0 0 2962200 20759000 20972000 6271600 4359600 21214000 20228 5248 18433 169680;169681;169682;169683;169684;169685;169686;169687;169688;169689;169690 135169;135170;135171;135172;135173;135174;135175;135176;135177 135172 6 GRGGPPGQFHDNANGGQNGTVQEIMIPAGK Unmodified 3003.4369 0.43694939 3690 Q92945 KHSRP Far upstream element-binding protein 2 yes yes 0 0 1 By matching By MS/MS By MS/MS 10 0 3 1 1 1 62.866 63.118 4 4.0096E-61 71230 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 101.93 96.825 26871000 0 0 0 0 0 3188900 0 0 0 0 0 0 0 5693100 17989000 20229 3690 18434 169691;169692;169693 135178;135179 135178 2 GRGITGVEDK Unmodified 1030.5407 0.5407224 1249 P29401 TKT Transketolase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.29 0.452 5 2 3 2 2 17.329 13.799 2 3.2052E-05 17745 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 145.25 46.949 4135800000 2704800000 472690000 958290000 0 0 0 0 0 0 0 0 0 0 0 0 20230 1249 18435 169694;169695;169696;169697;169698;169699;169700 135180;135181;135182;135183;135184;135185;135186;135187;135188;135189;135190;135191;135192 135183 12 GRHGSGSGQSSSYGPYR Unmodified 1738.7772 0.77715771 104 CON__Q86YZ3;Q86YZ3 HRNR Hornerin yes no 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 2 1 12.301 12.559 3;4 0.001912 11647 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 35.329 33.026 + 19457000 0 0 0 0 0 0 0 2937000 0 1941000 1948600 4345600 6577600 1707000 0 20231 104 18436 169701;169702;169703;169704;169705;169706;169707 135193;135194;135195;135196 135195 2 GRHVVLGAIENK Unmodified 1291.7361 0.73606817 1435 P41227 NAA10 N-alpha-acetyltransferase 10 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 35 1 1 3 3 5 3 4 4 6 2 1 2 34.049 34.327 2;3 6.9758E-114 35555 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 211.86 178.6 4973900000 0 0 0 42370000 33050000 98857000 254610000 684420000 571190000 522050000 507470000 2163100000 40792000 14804000 41265000 20232 1435 18437 169708;169709;169710;169711;169712;169713;169714;169715;169716;169717;169718;169719;169720;169721;169722;169723;169724;169725;169726;169727;169728;169729;169730;169731;169732;169733;169734;169735;169736;169737;169738;169739;169740;169741;169742 135197;135198;135199;135200;135201;135202;135203;135204;135205;135206;135207;135208;135209;135210;135211;135212;135213;135214;135215;135216;135217;135218;135219;135220;135221;135222;135223;135224;135225;135226;135227;135228;135229 135225 25 GRIAVGSDADLVIWDPDSVK Unmodified 2112.0851 0.085133198 2613 Q16555 DPYSL2 Dihydropyrimidinase-related protein 2 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 88.602 82.743 3 1.0542E-05 85494 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 65.784 60.33 36040000 36040000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20233 2613 18438 169743;169744 135230;135231;135232;135233 135231 4 GRILDDDTIITTLENLK Unmodified 1929.0419 0.0418714 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 2 2 2 2 97.269 92.348 3 2.1565E-07 115774 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.552 82.773 62316000 37632000 24684000 0 0 0 0 0 0 0 0 0 0 0 0 0 20234 2392 18439 169745;169746;169747;169748 135234;135235;135236 135236 3 GRLDNGQVGLYPANYVEAIQ Unmodified 2176.0913 0.091281208 5030 Q9UNF0 PACSIN2 Protein kinase C and casein kinase substrate in neurons protein 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 87.172 83.534 2 7.5839E-09 103642 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.754 77.876 43478000 0 41070000 2408200 0 0 0 0 0 0 0 0 0 0 0 0 20235 5030 18440 169749;169750 135237;135238 135237 2 GRLDSELR Unmodified 944.50394 0.50394296 74;66;58;779;80;96 P04259;CON__P50446;CON__P13647;P13647;CON__P02538;P02538;CON__P04259;CON__Q5XKE5;Q5XKE5 KRT6B;KRT5;KRT6A;KRT79 Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 79 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 21.938 22.067 2 0.015437 22997 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 131.06 51.593 + 3831800000 0 0 0 994640000 266800000 0 444220000 0 260100000 361500000 418620000 0 858860000 227060000 0 20236 779;80;74;58;66;96 18441 169751;169752;169753;169754;169755;169756;169757;169758 135239;135240;135241;135242;135243;135244;135245;135246 135240 0 GRLDYLSSLK Unmodified 1150.6346 0.63462279 860 P08195 SLC3A2 4F2 cell-surface antigen heavy chain yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 2 1 1 1 1 1 1 1 59.479 59.72 2;3 0.030679 68222 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 31.597 20.433 113470000 0 0 0 0 0 14725000 5919700 0 8593000 11186000 11558000 19589000 0 14590000 27308000 20237 860 18442 169759;169760;169761;169762;169763;169764;169765;169766;169767 135247;135248;135249 135247 3 GRLESAQATFQAHR Unmodified 1570.7964 0.79643659 1711 P53365 ARFIP2 Arfaptin-2 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 32.746 32.996 3 0.0011336 34766 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.37 31.744 89572000 0 0 0 0 2776600 17490000 5122400 7665400 0 0 10499000 18101000 0 6972700 20944000 20238 1711 18443 169768;169769;169770;169771;169772;169773;169774;169775;169776 135250;135251;135252;135253;135254;135255;135256 135253 6 GRLESAQATFQAHRDK Unmodified 1813.9183 0.91834264 1711 P53365 ARFIP2 Arfaptin-2 yes yes 0 0 2 By matching By MS/MS By MS/MS 10 0 3 1 1 1 28.032 28.495 4 0.011448 29667 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 31.647 27.429 29088000 0 0 0 0 0 4553700 0 0 0 0 0 9100900 0 0 15433000 20239 1711 18444 169777;169778;169779 135257 135257 0 GRLMPGQDPEK Unmodified 1226.6078 0.60775611 3744 Q96AY3 FKBP10 Peptidyl-prolyl cis-trans isomerase FKBP10 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.44 3.98 4 5 2 2 1 1 1 1 1 24.645 22.976 2;3 6.4057E-08 34134 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 150.1 105.66 518450000 442530000 0 5181200 0 0 0 0 18831000 0 0 12237000 16300000 6103600 0 17267000 20240 3744 18445 169780;169781;169782;169783;169784;169785;169786;169787;169788 135258;135259;135260;135261 135260 2 GRLMPGQDPEK Oxidation (M) 1242.6027 0.60267073 3744 Q96AY3 FKBP10 Peptidyl-prolyl cis-trans isomerase FKBP10 yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 16.986 13.625 3 0.0080978 20175 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.834 72.347 86466000 80192000 0 6273600 0 0 0 0 0 0 0 0 0 0 0 0 20241 3744 18445 169789;169790 135262 135262 5321 0 GRMGSSLVIEISEEEVNK Oxidation (M) 1991.9834 0.98337024 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 1 1 By MS/MS 2 0 1 1 80.237 72.106 3 0.0013261 94587 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.487 38.546 12358000 12358000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20242 4634 18446 169791 135263 135263 6033 1 GRNDLMEYAK Unmodified 1195.5656 0.56555694 737 P00966 ASS1 Argininosuccinate synthase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.96 3.82 1 5 3 14 4 4 1 1 1 1 1 1 1 1 1 2 1 1 2 43.416 41.905 2;3 0.0026119 50761 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.499 47.94 6663000000 3722100000 640920000 1351300000 19576000 18126000 25842000 23158000 22554000 19216000 32731000 98334000 156290000 27827000 95149000 409860000 20243 737 18447 169792;169793;169794;169795;169796;169797;169798;169799;169800;169801;169802;169803;169804;169805;169806;169807;169808;169809;169810;169811;169812;169813;169814 135264;135265;135266;135267;135268;135269;135270;135271;135272;135273;135274;135275;135276;135277;135278;135279;135280;135281;135282 135267 17 GRNDLMEYAK Oxidation (M) 1211.5605 0.56047157 737 P00966 ASS1 Argininosuccinate synthase yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS 7.89 3.41 3 2 13 2 2 1 1 1 1 1 1 1 2 1 1 2 1 24.001 22.986 3 0.0090622 29643 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 64.103 48.474 3291000000 1338700000 534460000 859360000 15807000 0 21843000 15816000 15872000 16014000 30947000 120110000 76953000 31409000 102190000 111540000 20244 737 18447 169815;169816;169817;169818;169819;169820;169821;169822;169823;169824;169825;169826;169827;169828;169829;169830;169831;169832 135283;135284;135285;135286;135287;135288;135289;135290;135291;135292;135293;135294;135295;135296;135297 135296 900 10 GRNLPSSAQPFIPK Unmodified 1510.8256 0.82561145 2810 Q5VT52 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 1 2 2 2 2 2 2 2 2 2 57.848 57.968 2;3 2.1772E-06 65644 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 69.258 64.628 678300000 0 0 0 35315000 32998000 35328000 66233000 65346000 51307000 60492000 72632000 70515000 62232000 52802000 73102000 20245 2810 18448 169833;169834;169835;169836;169837;169838;169839;169840;169841;169842;169843;169844;169845;169846;169847;169848;169849;169850;169851;169852;169853;169854;169855 135298;135299;135300;135301;135302;135303;135304;135305;135306;135307;135308;135309 135308 9 GRPAGGPDPSLQPR Unmodified 1403.727 0.72696004 2278 Q13395 TARBP1 Probable methyltransferase TARBP1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 28.069 28.25 3 0.018822 30406 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 32.702 21.756 83894000 0 0 0 4740200 5210700 10742000 5377500 7785600 3418700 9171000 9883500 12122000 0 6013700 9428300 20246 2278 18449 169856;169857;169858;169859;169860;169861;169862;169863;169864;169865;169866 135310 135310 1 GRPAPGFHHGDGPGNAVQEIMIPASK Oxidation (M) 2655.2976 0.29760236 3737 Q96AE4 FUBP1 Far upstream element-binding protein 1 yes yes 0 1 1 By MS/MS 10 0 1 1 59.037 59.631 4 1.5165E-41 67036 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.29 92.932 35340000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35340000 20247 3737 18450 169867 135311;135312;135313 135312 5309 3 GRPAVCQPQGR Unmodified 1224.6146 0.61457282 2781 Q5T749 KPRP Keratinocyte proline-rich protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 2 2 2 2 2 2 2 1 2 2 1 11.735 11.83 2;3 0.00027919 10556 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 105.98 93.478 766380000 0 0 0 435910000 28988000 37313000 50946000 22277000 19372000 34828000 0 34043000 82903000 17670000 2129700 20248 2781 18451 169868;169869;169870;169871;169872;169873;169874;169875;169876;169877;169878;169879;169880;169881;169882;169883;169884;169885;169886;169887 135314;135315;135316;135317;135318;135319;135320 135319 2 GRPDPYAYIPLNR Unmodified 1530.7943 0.79431133 2739 Q5JTH9 RRP12 RRP12-like protein yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 71.787 71.912 3 0.013923 82738 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 25.542 18.177 33770000 0 0 0 0 1618600 3149700 0 2038800 2088100 2934500 2781900 4539400 3119900 3212100 8287200 20249 2739 18452 169888;169889;169890;169891;169892;169893;169894;169895;169896;169897 135321;135322;135323;135324 135321 4 GRPETSVWPLR Unmodified 1296.6939 0.693869 3801 Q96DT7 ZBTB10 Zinc finger and BTB domain-containing protein 10 yes yes 0 0 1 By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 58.84 59.026 3 0.010037 67248 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 45.077 28.052 42496000 0 0 0 0 1943100 4950200 2708900 0 2056100 3481800 7169700 3472900 4367500 4197400 8148900 20250 3801 18453 169898;169899;169900;169901;169902;169903;169904;169905;169906;169907 135325;135326;135327 135325 3 GRPGPEGAGPAAGLDVR Unmodified 1575.8118 0.8117523 4227 Q9BXK1 KLF16 Krueppel-like factor 16 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 44.173 44.508 3 8.0227E-06 49198 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 66.779 58.18 127690000 0 0 0 0 0 21351000 0 0 0 18282000 25558000 0 15007000 16036000 31453000 20251 4227 18454 169908;169909;169910;169911;169912;169913;169914;169915 135328;135329;135330;135331;135332;135333;135334;135335 135334 8 GRPGPVAGHHQMPR Unmodified 1495.7579 0.75788302 614 O94979 SEC31A Protein transport protein Sec31A yes yes 0 0 1 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 14.674 14.822 3 0.0086343 14362 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 38.279 16.081 13979000 0 0 0 0 0 2148100 0 0 0 2769300 0 0 4414500 4647500 0 20252 614 18455 169916;169917;169918;169919 135336;135337 135337 2 GRPIFWMEK Oxidation (M) 1178.5906 0.59064948 3703 Q93015 NAT6 N-acetyltransferase 6 yes yes 0 1 1 By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 2 1 1 49.958 50.067 2;3 0.0058596 56610 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 56.013 46.691 221150000 0 0 0 3476600 0 3826500 65208000 22667000 100570000 8809000 0 16586000 0 0 0 20253 3703 18456 169920;169921;169922;169923;169924;169925;169926;169927 135338;135339;135340;135341 135339 5282 3 GRPIFWMEK Unmodified 1162.5957 0.59573486 3703 Q93015 NAT6 N-acetyltransferase 6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 64.719 64.932 3 0.018572 74127 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 65.157 65.157 58514000 0 0 0 0 0 0 7544200 20985000 21054000 3033800 0 5897900 0 0 0 20254 3703 18456 169928;169929;169930;169931;169932 135342;135343 135342 0 GRPMVISSGMQSMDTMK Oxidation (M) 1870.8409 0.84094522 4591 Q9NR45 NANS Sialic acid synthase yes yes 0 1 1 By MS/MS 10 0 1 1 54.707 55.347 3 0.00012813 61964 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.096 51.174 7409800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7409800 20255 4591 18457 169933 135344 135344 5990 1 GRPSLTGENLEAK Unmodified 1370.7154 0.7153923 4244 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 yes yes 0 0 1 By MS/MS 2 0 1 1 42.214 35.478 3 0.028579 48874 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 27.133 1.1509 12434000 12434000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20256 4244 18458 169934 135345 135345 1 GRPVPMMIPDELAPTYSLDTR 2 Oxidation (M) 2390.161 0.16101703 699 O95834 EML2 Echinoderm microtubule-associated protein-like 2 yes yes 0 2 1 By MS/MS By MS/MS 10 0 2 1 1 77.182 77.415 3 1.2841E-15 88980 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.036 80.044 23834000 0 0 0 0 0 0 0 0 0 0 5467900 0 0 0 18367000 20257 699 18459 169935;169936 135346;135347;135348;135349 135347 843;844 4 GRPYDYNGPR Unmodified 1193.5578 0.55776945 982 P13667 PDIA4 Protein disulfide-isomerase A4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 2 1 1 2 1 1 1 2 2 23.944 24.166 2;3 0.008362 25984 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 52.49 45.208 195330000 0 0 0 10702000 11508000 0 11025000 13466000 10977000 0 22153000 15721000 17329000 22174000 60279000 20258 982 18460 169937;169938;169939;169940;169941;169942;169943;169944;169945;169946;169947;169948;169949;169950 135350;135351;135352;135353;135354;135355;135356 135356 3 GRPYDYNGPREK Unmodified 1450.6953 0.69532556 982 P13667 PDIA4 Protein disulfide-isomerase A4 yes yes 0 0 2 By MS/MS 2 0 1 1 23.149 18.253 3 0.00010453 25977 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.98 100.05 109900000 109900000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20259 982 18461 169951 135357 135357 0 GRQNISPDK Unmodified 1013.5254 0.52540669 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 7.316 4.3241 2 0.040328 7688 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.06 104.06 455110000 382380000 18638000 54097000 0 0 0 0 0 0 0 0 0 0 0 0 20260 2392 18462 169952;169953;169954 135358 135358 1 GRQPGEVTREQQDAK Unmodified 1697.8445 0.844509 2204 Q12899 TRIM26 Tripartite motif-containing protein 26 yes yes 0 0 2 By MS/MS By MS/MS 2 0 3 2 1 11.352 7.9758 3;4 2.1523E-12 12584 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 103.6 86.352 137670000 134830000 0 2837600 0 0 0 0 0 0 0 0 0 0 0 0 20261 2204 18463 169955;169956;169957 135359;135360;135361 135361 2 GRRPSQDDVEAAPEETR Unmodified 1911.9035 0.90348044 580 O94761 RECQL4 ATP-dependent DNA helicase Q4 yes yes 0 0 2 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 21.266 21.442 3 0.0081337 22082 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 52.172 42.423 55108000 0 0 0 3320100 5321200 3367600 4828400 3799900 3279400 5262200 0 8281800 5282400 7223100 5142100 20262 580 18464 169958;169959;169960;169961;169962;169963;169964;169965;169966;169967;169968 135362;135363;135364 135363 3 GRSAEEVEEIK Unmodified 1245.6201 0.62009493 3537 Q8WUA2 PPIL4 Peptidyl-prolyl cis-trans isomerase-like 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 27.612 23.335 3 0.0084782 29614 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 68.44 42.323 87127000 24778000 31145000 31204000 0 0 0 0 0 0 0 0 0 0 0 0 20263 3537 18465 169969;169970;169971 135365;135366 135366 0 GRSAINEVVTR Unmodified 1200.6575 0.65748349 1926 P62899 RPL31 60S ribosomal protein L31 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.389 29.581 3 0.0032885 32077 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 71.176 55.788 302920000 0 0 0 19316000 12308000 14973000 27475000 17651000 19464000 31016000 30053000 31823000 24984000 19840000 54021000 20264 1926 18466 169972;169973;169974;169975;169976;169977;169978;169979;169980;169981;169982;169983 135367;135368;135369;135370;135371;135372;135373;135374;135375;135376 135372 2 GRSDYDGIGSR Unmodified 1181.5425 0.54251332 170 O00571 DDX3X ATP-dependent RNA helicase DDX3X yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 17.846 18.016 3 0.031842 18179 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 27.967 18.963 17861000 0 0 0 0 0 3275500 0 0 2891600 3775600 0 0 4347000 3571800 0 20265 170 18467 169984;169985;169986;169987;169988 135377 135377 1 GRSEDIYRIYSHDGTDSPPDADEVVIVLNNFK Unmodified 3620.7383 0.73831918 4751 Q9NYU2 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes yes 0 0 2 By MS/MS 2 0 1 1 96.084 87.953 4 0.0018345 113661 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 28.443 23.537 11734000 11734000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20266 4751 18468 169989 135378 135378 0 GRSPDELPSAGGDGGK Unmodified 1498.7012 0.7011988 417 O60610 DIAPH1 Protein diaphanous homolog 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 24.412 23.5 3 0.0043357 28924 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 38.093 27.74 561090000 29304000 143310000 8591900 25694000 20637000 29588000 30159000 28124000 20835000 36875000 34511000 37066000 48482000 30779000 37135000 20267 417 18469 169990;169991;169992;169993;169994;169995;169996;169997;169998;169999;170000;170001;170002;170003;170004;170005 135379;135380;135381;135382;135383;135384;135385;135386;135387;135388;135389;135390 135382 7 GRTFNLTAGSLESTEPIYVYK Unmodified 2345.1903 0.19032655 2940 Q6P996 PDXDC1 Pyridoxal-dependent decarboxylase domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS 6 4 1 1 1 1 84.238 80.281 3 2.2904E-11 93827 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.456 70.916 25481000 11097000 0 0 0 0 0 0 0 0 0 0 0 0 0 14384000 20268 2940 18470 170006;170007 135391;135392 135391 2 GRTGLIPSNYVAEQAESIDNPLHEAAK Unmodified 2879.4413 0.44134929 3678 Q92882 OSTF1 Osteoclast-stimulating factor 1 yes yes 0 0 1 By MS/MS 2 0 1 1 86.063 77.933 4 6.2445E-39 101552 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 100.27 94.562 87456000 87456000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20269 3678 18471 170008 135393;135394 135393 2 GRTPSAFPQTPAAPPATLGEGSADTEDR Unmodified 2796.3315 0.33146449 4469 Q9H9B1 EHMT1 Histone-lysine N-methyltransferase EHMT1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 68.376 68.192 3 1.4616E-07 78613 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 38.234 25.556 25765000 0 0 0 5177300 6840200 2054100 7094700 0 0 0 0 0 4598500 0 0 20270 4469 18472 170009;170010;170011;170012;170013 135395;135396;135397;135398;135399 135399 5 GRTPSAFPQTPAAPPATLGEGSADTEDRK Unmodified 2924.4264 0.42642751 4469 Q9H9B1 EHMT1 Histone-lysine N-methyltransferase EHMT1 yes yes 0 0 2 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 62.954 62.348 4 2.4716E-08 71083 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 40.094 37.555 119560000 10574000 0 0 0 0 14250000 7201100 8083200 8587900 11928000 11187000 12612000 0 10618000 24523000 20271 4469 18473 170014;170015;170016;170017;170018;170019;170020;170021;170022;170023 135400;135401;135402;135403;135404 135400 3 GRTQLSLLPR Unmodified 1139.6775 0.67749065 2475 Q15020 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.639 52.784 3 0.002598 59566 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 74.944 61.591 114070000 0 0 0 6228500 3305400 9162700 6414500 4832500 7844800 8104900 9540800 13635000 15360000 10232000 19405000 20272 2475 18474 170024;170025;170026;170027;170028;170029;170030;170031;170032;170033;170034;170035 135405;135406;135407;135408;135409;135410;135411;135412;135413;135414;135415 135412 11 GRTVIIEQSWGSPK Unmodified 1556.8311 0.83109076 930 P10809 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 56.719 56.197 3 1.3839E-16 63207 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 98.943 92.062 301210000 17855000 0 0 11405000 7191800 29648000 17809000 23605000 21483000 24608000 26872000 32622000 25050000 20481000 42582000 20273 930 18475 170036;170037;170038;170039;170040;170041;170042;170043;170044;170045;170046;170047;170048 135416;135417;135418;135419;135420;135421;135422;135423;135424;135425;135426;135427;135428 135421 10 GRVFANAPDSACVIGLK Unmodified 1773.9196 0.91958819 1063 P17858 PFKL ATP-dependent 6-phosphofructokinase, liver type yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 70.079 70.217 3 0.00034588 79991 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.703 46.916 125320000 0 0 0 0 4388500 16191000 6089700 12063000 9982200 9711800 9183300 18472000 0 0 39236000 20274 1063 18476 170049;170050;170051;170052;170053;170054;170055;170056;170057 135429;135430;135431;135432;135433;135434;135435;135436;135437;135438;135439;135440;135441 135434 13 GRVNFDDYTVNLGGLK Unmodified 1766.8951 0.89514758 2125 Q06210 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes yes 0 0 1 By MS/MS 10 0 1 1 78.215 78.461 3 0.00047423 90169 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.542 31.345 16435000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16435000 20275 2125 18477 170058 135442 135442 1 GRWQGNDIVVK Unmodified 1270.6782 0.67821894 2284 Q13418 ILK Integrin-linked protein kinase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.58 39.759 3 0.0042033 44169 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 42.061 32.374 4429500000 0 0 0 357380000 218510000 769910000 301440000 318920000 647220000 353040000 317120000 372090000 276690000 239460000 257690000 20276 2284 18478 170059;170060;170061;170062;170063;170064;170065;170066;170067;170068;170069;170070 135443;135444;135445 135443 2 GRYEAEGQALTEK Unmodified 1450.7052 0.70522155 3495 Q8TD16 BICD2 Protein bicaudal D homolog 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 32.529 27.795 3 0.016916 35359 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 44.968 35.435 20463000 3197500 0 17265000 0 0 0 0 0 0 0 0 0 0 0 0 20277 3495 18479 170071;170072 135446 135446 1 GRYEITAEDSQEK Unmodified 1524.7056 0.70561548 4442 Q9H814 PHAX Phosphorylated adapter RNA export protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS 9.56 1.83 1 17 1 1 1 1 2 1 1 1 2 2 2 1 2 25.216 25.3 2;3 2.0813E-06 25607 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.105 69.147 154020000 0 0 13767000 4976400 6845000 7854000 9470600 6139200 6098500 9134300 14232000 18022000 17774000 11648000 28054000 20278 4442 18480 170073;170074;170075;170076;170077;170078;170079;170080;170081;170082;170083;170084;170085;170086;170087;170088;170089;170090 135447;135448;135449;135450;135451;135452;135453 135447 6 GRYPDHSVDRR Unmodified 1356.6647 0.66469414 2532 Q15424 SAFB Scaffold attachment factor B1 yes yes 0 0 2 By matching By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 7.1367 7.3888 3 0.0053208 4760 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.456 54.449 54315000 0 0 0 0 0 0 0 0 0 6435100 11146000 0 8813500 7094000 20826000 20279 2532 18481 170091;170092;170093;170094;170095 135454 135454 1 GRYYSVNVPIQDGIQDEK Unmodified 2080.0225 0.022532941 4239 Q9BY41 HDAC8 Histone deacetylase 8 yes yes 0 0 1 By MS/MS 2 0 1 1 75.872 67.741 3 0.017508 89335 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 32.833 18.361 19492000 19492000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20280 4239 18482 170096 135455 135455 1 GSADNVTVMVVR Unmodified 1246.634 0.63397086 4322 Q9H0C8 ILKAP Integrin-linked kinase-associated serine/threonine phosphatase 2C yes yes 0 0 0 By MS/MS 10 0 1 1 56.943 57.554 2 0.042281 64704 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.334 16.048 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20281 4322 18483 170097 135456 135456 1 GSAFSTSISK Unmodified 983.49238 0.49237523 5090 Q9Y285 FARSA Phenylalanine--tRNA ligase alpha subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 34.986 33.753 2 0.0064586 37039 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 64.841 46.11 749590000 79529000 479810000 5977400 0 11635000 11734000 14842000 16683000 10536000 13898000 27219000 26800000 15110000 0 35815000 20282 5090 18484 170098;170099;170100;170101;170102;170103;170104;170105;170106;170107;170108;170109;170110;170111 135457;135458;135459;135460;135461;135462;135463;135464;135465;135466;135467;135468;135469 135464 11 GSAITGPVAK Unmodified 899.50763 0.50763136 1913 P62829 RPL23 60S ribosomal protein L23 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24.79 24.092 2 0.0029455 25863 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 78.516 34.121 5750400000 130880000 2643400000 14065000 201280000 175020000 190230000 236060000 191360000 168700000 231140000 276210000 358710000 311760000 220790000 400800000 20283 1913 18485 170112;170113;170114;170115;170116;170117;170118;170119;170120;170121;170122;170123;170124;170125;170126 135470;135471;135472;135473;135474;135475;135476;135477;135478;135479;135480;135481;135482;135483;135484;135485;135486;135487 135478 17 GSALEGRADTTTGSAAGPPLSEDDK Unmodified 2402.1197 0.11974038 4469 Q9H9B1 EHMT1 Histone-lysine N-methyltransferase EHMT1 yes yes 0 0 1 By MS/MS 2 0 1 1 50.076 44.369 3 6.2445E-21 57748 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.981 54.038 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20284 4469 18486 170127 135488 135488 1 GSALGTPAAAEPVTPTSK Unmodified 1653.8574 0.85736509 731 P00519 ABL1 Tyrosine-protein kinase ABL1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 50.27 50.235 2 1.0833E-10 56579 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 110.38 98.513 87317000 0 0 0 9172700 8068200 0 12641000 13016000 0 11526000 0 0 20109000 12784000 0 20285 731 18487 170128;170129;170130;170131;170132;170133;170134;170135 135489;135490;135491;135492;135493;135494;135495;135496 135489 8 GSAPAGNPGATGPPLK Unmodified 1390.7205 0.72047768 4517 Q9HCK8 CHD8 Chromodomain-helicase-DNA-binding protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.294 36.475 2 1.2022E-07 40108 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 88.187 73.98 80202000 0 0 0 5106900 4623600 9025800 5963900 4038700 7306600 6031300 5539600 8304200 7828700 6814700 9617700 20286 4517 18488 170136;170137;170138;170139;170140;170141;170142;170143;170144;170145;170146;170147 135497;135498;135499;135500;135501;135502;135503;135504;135505;135506;135507;135508 135501 12 GSAPAGNPGATGPPLKPAVTLTSTPTQGESK Unmodified 2888.488 0.48796513 4517 Q9HCK8 CHD8 Chromodomain-helicase-DNA-binding protein 8 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 67.485 67.636 3 6.0521E-05 77458 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 28.443 17.132 39057000 0 0 0 5644700 0 0 7169000 0 0 0 5620500 6630500 4590400 3682900 5718700 20287 4517 18489 170148;170149;170150;170151;170152;170153;170154 135509;135510;135511;135512 135512 4 GSASFFLK Unmodified 855.44905 0.44905385 2830 Q5VZ89 DENND4C DENN domain-containing protein 4C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 60.962 60.965 2 0.040979 69607 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 50.127 32.565 61200000 0 0 0 4853100 5529700 7449600 6338600 7637100 4940300 0 9964100 0 8253600 6233500 0 20288 2830 18490 170155;170156;170157;170158;170159;170160;170161;170162;170163 135513 135513 1 GSASTPVQGSIPEGK Unmodified 1413.71 0.70997257 620 O95081 AGFG2 Arf-GAP domain and FG repeat-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.9 37.081 2 0.00017846 41311 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 89.301 81.08 563770000 0 0 0 32259000 22512000 42631000 38519000 34150000 44442000 53575000 46730000 50641000 52913000 52416000 92980000 20289 620 18491 170164;170165;170166;170167;170168;170169;170170;170171;170172;170173;170174;170175 135514;135515;135516;135517;135518;135519;135520;135521;135522;135523 135514 7 GSASTPVQGSIPEGKPLR Unmodified 1779.9479 0.94791144 620 O95081 AGFG2 Arf-GAP domain and FG repeat-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 47.308 47.482 3 2.0621E-05 53340 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 68.243 57.128 188190000 0 0 0 14910000 12687000 0 24441000 17972000 4765800 18075000 23956000 24664000 16869000 12621000 17232000 20290 620 18492 170176;170177;170178;170179;170180;170181;170182;170183;170184;170185;170186 135524;135525;135526;135527;135528;135529;135530;135531;135532;135533 135525 10 GSATAESPVACSNSCSSFILMDDLSPK Oxidation (M) 2846.2409 0.24085985 3077 Q7Z309 FAM122B Protein FAM122B yes yes 0 1 0 By MS/MS 2 0 1 1 84.248 79.504 3 7.1843E-30 98860 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.147 89.026 41748000 0 41748000 0 0 0 0 0 0 0 0 0 0 0 0 0 20291 3077 18493 170187 135534 135534 4690 1 GSATAESPVACSNSCSSFILMDDLSPK Unmodified 2830.2459 0.24594523 3077 Q7Z309 FAM122B Protein FAM122B yes yes 0 0 0 By MS/MS 2 0 2 2 91.851 86.941 2;3 1.3586E-180 107924 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 141.37 138.87 246510000 0 246510000 0 0 0 0 0 0 0 0 0 0 0 0 0 20292 3077 18493 170188;170189 135535;135536 135535 2 GSATNYITR Unmodified 981.48796 0.48795855 167 O00541 PES1 Pescadillo homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 26.196 26.448 2 0.0032698 28122 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 93.162 75.254 912910000 0 0 0 81491000 0 115440000 79583000 50274000 52381000 95739000 106880000 109040000 76225000 64310000 81546000 20293 167 18494 170190;170191;170192;170193;170194;170195;170196;170197;170198;170199;170200 135537;135538;135539;135540;135541;135542;135543;135544;135545;135546;135547 135538 9 GSAVATSHFEVGNTCPSEFPSK Unmodified 2308.043 0.043010387 3631 Q92576 PHF3 PHD finger protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 62.49 62.548 3 2.8916E-08 70817 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.35 38.662 51719000 0 0 0 3859000 4475100 0 4499200 5522000 5656700 6658100 8244200 0 0 5649000 7155800 20294 3631 18495 170201;170202;170203;170204;170205;170206;170207;170208;170209 135548;135549;135550;135551;135552;135553;135554;135555;135556;135557;135558 135550 11 GSAVHQLSEELR Unmodified 1324.6735 0.67352749 1802 P58107 EPPK1 Epiplakin yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 14 2 1 1 2 1 1 1 1 2 2 44.322 44.582 2;3 0.0060643 49207 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 52.247 37.382 157180000 0 0 0 35820000 0 0 0 22237000 0 0 22298000 15127000 10651000 33307000 17741000 20295 1802 18496 170210;170211;170212;170213;170214;170215;170216;170217;170218;170219;170220;170221;170222;170223 135559;135560;135561;135562;135563;135564;135565;135566;135567 135563 9 GSAVPSDGQAREK Unmodified 1300.6371 0.63714198 4216 Q9BWW4 SSBP3 Single-stranded DNA-binding protein 3 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 11.377 7.8014 2 0.019948 10754 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.726 45.64 27858000 6305600 21553000 0 0 0 0 0 0 0 0 0 0 0 0 0 20296 4216 18497 170224;170225 135568 135568 1 GSAYGLSGADSYK Unmodified 1274.5779 0.57789577 1699 P52756 RBM5 RNA-binding protein 5 yes yes 0 0 0 By MS/MS 2 0 1 1 45.363 40.042 2 0.01715 51977 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.355 68.355 32398000 0 32398000 0 0 0 0 0 0 0 0 0 0 0 0 0 20297 1699 18498 170226 135569 135569 1 GSCGIGGGIGGGSSR Unmodified 1277.5782 0.5782469 56;70 CON__P02533;P02533;CON__P08779;P08779 KRT14;KRT16 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 2 1 1 1 1 27.202 27.327 2 0.0027138 29422 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 77.124 77.124 + 971690000 0 0 0 465870000 50460000 27971000 21614000 48810000 0 64010000 0 48763000 218800000 25395000 0 20298 56;70 18499 170227;170228;170229;170230;170231;170232;170233;170234;170235;170236 135570;135571;135572 135571 0 GSCNLSRVDSTTCLFPVEEK Unmodified 2298.062 0.062031269 2125 Q06210 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 78.588 72.813 3 2.9764E-23 94197 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.635 78.416 30397000 23836000 6561600 0 0 0 0 0 0 0 0 0 0 0 0 0 20299 2125 18500 170237;170238;170239 135573;135574;135575 135575 3 GSDALSETSSVSHIEDLEK Unmodified 2002.9331 0.93310881 2940 Q6P996 PDXDC1 Pyridoxal-dependent decarboxylase domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 66.777 66.86 2;3 1.2828E-38 76555 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 115.57 101.74 877750000 0 0 0 35200000 44135000 89281000 50199000 72775000 55540000 88649000 77720000 89221000 67431000 81253000 126350000 20300 2940 18501 170240;170241;170242;170243;170244;170245;170246;170247;170248;170249;170250;170251;170252;170253;170254;170255;170256;170257;170258;170259;170260;170261;170262;170263 135576;135577;135578;135579;135580;135581;135582;135583;135584;135585;135586;135587;135588;135589;135590;135591;135592;135593;135594;135595 135586 16 GSDAPSLQNR Unmodified 1043.4996 0.49958587 637 O95263 PDE8B High affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8B yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 18.996 19.248 2 0.0069975 19683 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 63.534 54.621 41987000 0 0 0 0 2601100 0 2888600 2585500 2471400 6091700 4454300 7004800 4897600 3451400 5540600 20301 637 18502 170264;170265;170266;170267;170268;170269;170270;170271;170272;170273 135596;135597;135598;135599;135600 135596 5 GSDCGIVNVNIPTSGAEIGGAFGGEK Unmodified 2505.1806 0.1805665 1573 P49419 ALDH7A1 Alpha-aminoadipic semialdehyde dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 1 4 1 87.376 82.93 2;3 2.9113E-08 103661 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.86 109.55 692360000 11210000 679000000 2151900 0 0 0 0 0 0 0 0 0 0 0 0 20302 1573 18503 170274;170275;170276;170277;170278;170279 135601;135602;135603;135604;135605 135602 5 GSDEPPVFLEIHYK Unmodified 1629.8039 0.80387296 1240 P28838 LAP3 Cytosol aminopeptidase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 5 3.56 1 1 1 1 1 1 81.639 79.816 3 0.0011637 91354 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.598 47.869 67960000 0 11111000 38333000 0 0 0 0 0 0 0 0 0 0 0 18515000 20303 1240 18504 170280;170281;170282 135606;135607;135608;135609 135606 4 GSDFDCELR Unmodified 1097.4448 0.44477311 1868 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.924 40.103 2 2.3788E-05 44118 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 145.34 145.34 899380000 0 0 0 38827000 30835000 73661000 42387000 37190000 36477000 112300000 104030000 106080000 84403000 85654000 147530000 20304 1868 18505 170283;170284;170285;170286;170287;170288;170289;170290;170291;170292;170293;170294 135610;135611;135612;135613;135614;135615;135616;135617;135618;135619;135620 135618 2 GSDGAASSYQLK Unmodified 1182.5517 0.55168102 2391 Q14203 DCTN1 Dynactin subunit 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 26.854 27.044 2 0.00042495 29015 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 101.66 86.726 106070000 0 0 0 5305200 5850200 12549000 8101200 0 7036900 9577800 11768000 16370000 14000000 0 15515000 20305 2391 18506 170295;170296;170297;170298;170299;170300;170301;170302;170303;170304 135621;135622;135623;135624;135625;135626;135627 135623 5 GSDHSASLEPGELAELVR Unmodified 1865.9119 0.91191986 4591 Q9NR45 NANS Sialic acid synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 80.29 80.47 3 9.5476E-30 92588 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.563 74.929 50555000 0 0 0 0 0 0 0 0 0 0 4189600 0 0 4028000 42338000 20306 4591 18507 170305;170306;170307 135628;135629;135630 135628 3 GSDLDPEEPIKVEEPEPVK Unmodified 2106.0368 0.036845601 3756 Q96BD8 SKA1 Spindle and kinetochore-associated protein 1 yes yes 0 0 1 By MS/MS 3 0 1 1 71.866 67.34 3 0.0021956 82123 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 43.794 34.006 4970700 0 4970700 0 0 0 0 0 0 0 0 0 0 0 0 0 20307 3756 18508 170308 135631 135631 1 GSDLPELFSK Unmodified 1091.5499 0.5498901 4412 Q9H694 BICC1 Protein bicaudal C homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 74.354 74.456 2 0.026327 85779 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 44.318 27.844 51260000 0 0 0 3098500 0 0 6125900 5674800 4765500 0 0 6207600 8159200 6606500 10622000 20308 4412 18509 170309;170310;170311;170312;170313;170314;170315;170316 135632 135632 1 GSDPFASDCFFR Unmodified 1404.5768 0.57684991 1457 P42566 EPS15 Epidermal growth factor receptor substrate 15 yes yes 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 79.991 80.064 2 0.047506 91831 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 33.229 27.448 17493000 0 0 0 0 555390 1431700 0 0 0 0 2158300 2672600 1552300 2166700 6955600 20309 1457 18510 170317;170318;170319;170320;170321;170322;170323 135633 135633 1 GSDQEVIQTGKPPR Unmodified 1510.774 0.77396981 4024 Q99570 PIK3R4 Phosphoinositide 3-kinase regulatory subunit 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 27.722 27.992 3 0.0072801 29004 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 31.389 24.661 78173000 0 0 0 0 6609400 8883800 0 0 5877100 10805000 11044000 9643000 6893000 7826800 10591000 20310 4024 18511 170324;170325;170326;170327;170328;170329;170330;170331;170332 135634;135635;135636;135637;135638;135639 135634 6 GSDQNASLYWLAR Unmodified 1479.7106 0.71064128 3983 Q96S55 WRNIP1 ATPase WRNIP1 yes yes 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 77.834 77.955 2 0.00068641 90475 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 73.067 55.202 36306000 0 0 0 0 0 6817600 3486900 0 0 5662100 5080400 6064500 3544700 5649500 0 20311 3983 18512 170333;170334;170335;170336;170337;170338;170339 135640 135640 1 GSDRDGGADGMSAECECNIK Oxidation (M) 2143.8205 0.82048037 2075 Q02413 DSG1 Desmoglein-1 yes yes 0 1 1 By MS/MS By matching By matching 10 0 3 1 1 1 19.225 19.088 3 0.00030477 19497 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 44.089 42.227 7467800 0 0 0 6069900 706810 0 691030 0 0 0 0 0 0 0 0 20312 2075 18513 170340;170341;170342 135641 135641 3370 1 GSDRDGGADGMSAECECNIK Unmodified 2127.8256 0.82556575 2075 Q02413 DSG1 Desmoglein-1 yes yes 0 0 1 By MS/MS 10 0 1 1 30.183 29.87 3 0.0075298 32687 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 30.19 29.724 8794800 0 0 0 8794800 0 0 0 0 0 0 0 0 0 0 0 20313 2075 18513 170343 135642 135642 1 GSDSIAYDK Unmodified 954.42944 0.42944062 1361 P35611 ADD1 Alpha-adducin yes yes 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching 10 0 7 1 1 1 1 1 1 1 18.244 18.449 2 0.030157 18864 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 48.283 25.392 20371000 0 0 0 0 3106700 0 2870100 2236100 0 3067900 2980500 0 0 2545300 3564500 20314 1361 18514 170344;170345;170346;170347;170348;170349;170350 135643 135643 1 GSDVIIMLVGNK Oxidation (M) 1260.6748 0.67477304 1105;4611 P20340;Q9NRW1 RAB6A;RAB6B Ras-related protein Rab-6A;Ras-related protein Rab-6B no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 77.733 77.85 2 0.0019826 89146 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 61.56 9.7977 52860000 0 0 0 0 0 6529600 6221300 0 5790400 9475300 0 7057500 9227200 8559200 0 20315 1105;4611 18515 170351;170352;170353;170354;170355;170356;170357 135644;135645;135646;135647 135646 1591 3 GSEAAQLLEAADFAAR Acetyl (Protein N-term) 1660.8057 0.80566387 3332 Q8N4P3 HDDC3 Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1 yes yes 1 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 96.903 96.931 2 0.00018191 112825 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 77.64 61.751 2820600 0 0 0 1004000 0 0 0 664430 0 0 0 1152200 0 0 0 20316 3332 18516 170358;170359;170360 135648;135649 135649 2 GSEAAQLLEAADFAARK Acetyl (Protein N-term) 1788.9006 0.90062689 3332 Q8N4P3 HDDC3 Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.78 3.79 3 2 4 4 1 1 1 1 1 94.016 91.749 2;3 1.2943E-52 113762 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 180.09 146.99 96918000 0 93126000 1180500 0 0 0 0 869400 720520 0 0 1021800 0 0 0 20317 3332 18517 170361;170362;170363;170364;170365;170366;170367;170368;170369 135650;135651;135652;135653;135654;135655;135656;135657 135650 8 GSEASAASRQSDTSGPVTTSK Unmodified 2022.9454 0.94540483 1469 P42858 HTT Huntingtin yes yes 0 0 1 By MS/MS 2 0 1 1 19.605 16.03 3 2.3244E-07 21034 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.771 62.85 22760000 0 22760000 0 0 0 0 0 0 0 0 0 0 0 0 0 20318 1469 18518 170370 135658 135658 1 GSEASSEAGVVTTR Unmodified 1349.6423 0.64228694 3134 Q86TC9 MYPN Myopalladin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 25.825 26.024 2 6.6188E-19 26407 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 153.95 134.7 592390000 0 0 0 39050000 36717000 44759000 45900000 50594000 37868000 57854000 54019000 73534000 50869000 37018000 64209000 20319 3134 18519 170371;170372;170373;170374;170375;170376;170377;170378;170379;170380;170381;170382 135659;135660;135661;135662;135663;135664;135665;135666;135667;135668;135669;135670;135671 135662 13 GSEEDVVSK Unmodified 948.44001 0.4400053 2835 Q5W0B1 RNF219 RING finger protein 219 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 12.432 12.553 2 0.0089221 11464 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 68.224 34.485 44062000 0 0 0 0 3351800 7913600 3901400 3545600 1526500 8524800 0 0 4122800 4464000 6711000 20320 2835 18520 170383;170384;170385;170386;170387;170388;170389;170390;170391 135672 135672 1 GSEEELADIK Unmodified 1089.519 0.51898391 3596 Q8WXX5 DNAJC9 DnaJ homolog subfamily C member 9 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41.655 41.159 2 0.0032163 51321 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.948 65.874 357220000 0 91039000 845970 20497000 16114000 17041000 21760000 12171000 14855000 23982000 25810000 30707000 29262000 15714000 37420000 20321 3596 18521 170392;170393;170394;170395;170396;170397;170398;170399;170400;170401;170402;170403;170404;170405 135673;135674;135675;135676;135677;135678;135679;135680;135681;135682;135683;135684;135685 135676 11 GSEENLDEAR Unmodified 1118.484 0.48399538 1361 P35611 ADD1 Alpha-adducin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 16.031 16.2 2 0.00099736 14692 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 110.87 88.132 53315000 0 0 0 2787700 2064800 3070000 3253400 3315000 3798500 4571300 7401300 9163300 0 7010600 6878900 20322 1361 18522 170406;170407;170408;170409;170410;170411;170412;170413;170414;170415;170416 135686;135687;135688;135689;135690;135691;135692;135693;135694;135695 135692 9 GSEENLDEAREQK Unmodified 1503.6801 0.68012901 1361 P35611 ADD1 Alpha-adducin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 5.4 3.77 2 1 2 1 2 1 1 17.29 15.131 3 0.00039605 14469 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 54.309 47.078 133170000 9526400 55661000 0 0 0 0 0 0 0 0 14742000 53241000 0 0 0 20323 1361 18523 170417;170418;170419;170420;170421 135696;135697;135698;135699;135700;135701 135700 5 GSEEVDSHCK Unmodified 1146.4612 0.46115145 5211 Q9Y4W2 LAS1L Ribosomal biogenesis protein LAS1L yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 5.8414 2.5406 3 0.028301 3977 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 43.77 27.567 72491000 0 72491000 0 0 0 0 0 0 0 0 0 0 0 0 0 20324 5211 18524 170422;170423 135702 135702 1 GSEGKPSLTLPASAPGPEEALTTVTVAPAPR Unmodified 3000.5768 0.57678014 1546 P48634 PRRC2A Protein PRRC2A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 84.253 84.349 3 6.4129E-53 97630 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 92.788 88.092 104670000 0 0 0 0 7957300 0 0 8980700 0 20906000 13373000 18885000 5522200 7699200 21349000 20325 1546 18525 170424;170425;170426;170427;170428;170429;170430;170431;170432 135703;135704;135705;135706;135707;135708;135709;135710;135711 135703 9 GSELIGR Acetyl (Protein N-term) 772.40792 0.40791731 5241 Q9Y5N6 ORC6 Origin recognition complex subunit 6 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 44.881 44.973 2 0.016252 50344 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 62.717 7.2762 44468000 0 0 0 7820500 0 7820800 8315000 0 0 12458000 0 0 0 0 8053600 20326 5241 18526 170433;170434;170435;170436;170437 135712;135713;135714;135715 135713 4 GSELQLPFQACLK Unmodified 1489.7599 0.75989966 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 85.861 85.192 2 6.0814E-21 106393 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.08 111.97 273270000 0 195050000 971380 0 2982000 3379000 2644900 6166100 4471700 7032800 5521600 10509000 7386200 8097100 19056000 20327 2930 18527 170438;170439;170440;170441;170442;170443;170444;170445;170446;170447;170448;170449;170450;170451 135716;135717;135718;135719;135720;135721;135722;135723;135724;135725;135726;135727;135728;135729;135730 135719 15 GSELQNYFTK Unmodified 1185.5666 0.5666028 1839 P61221 ABCE1 ATP-binding cassette sub-family E member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 59.939 60.042 2 0.0026435 67584 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.547 72.602 51233000 0 0 0 2396200 1974600 5116200 3079100 3961600 0 4295200 4679100 6428100 3668400 4782000 10853000 20328 1839 18528 170452;170453;170454;170455;170456;170457;170458;170459;170460;170461;170462 135731;135732;135733;135734;135735;135736;135737;135738;135739 135734 9 GSELQTQAK Unmodified 960.48762 0.4876242 82 CON__P81644 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 8.7556 8.9222 2 0.0035134 6493 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 107.66 58.306 + 36480000 0 0 0 0 3829300 0 5533100 6667300 0 0 8028500 0 4538500 2916700 4966200 20329 82 18529 170463;170464;170465;170466;170467;170468;170469;170470;170471 135740;135741;135742;135743;135744;135745;135746 135742 6 GSELSERIESFVETLK Unmodified 1822.9313 0.93125832 1598 P49770 EIF2B2 Translation initiation factor eIF-2B subunit beta yes yes 0 0 1 By MS/MS 2 0 1 1 98.021 89.891 3 2.0295E-23 115990 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 122.31 110.58 24366000 24366000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20330 1598 18530 170472 135747 135747 1 GSELWLGVDALGLNIYEQNDRLTPK Unmodified 2800.4396 0.43955838 1198 P26038 MSN Moesin yes yes 0 0 1 By MS/MS 2 0 1 1 98.73 90.6 3 1.3599E-21 116861 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.201 76.767 21496000 21496000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20331 1198 18531 170473 135748 135748 1 GSEPRPLVPPVSGHATIAR Unmodified 1940.0592 0.059193219 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 54.527 54.659 3;4 0.00021444 62295 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 54.271 47.38 408790000 0 0 0 19784000 13252000 29298000 23043000 28814000 21173000 26467000 48568000 53996000 48630000 41458000 54308000 20332 5262 18532 170474;170475;170476;170477;170478;170479;170480;170481;170482;170483;170484;170485;170486;170487;170488;170489;170490;170491;170492;170493;170494;170495;170496;170497 135749;135750;135751;135752;135753;135754;135755;135756;135757;135758;135759;135760;135761;135762;135763;135764;135765;135766 135763 14 GSEQTTGAENEVETNALPVVSK Unmodified 2259.0866 0.08664934 4492 Q9HAW4 CLSPN Claspin yes yes 0 0 0 By MS/MS 10 0 1 1 66.169 66.313 2 0.048689 76342 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 30.543 22.818 3612300 0 0 0 0 0 0 0 0 0 0 0 0 3612300 0 0 20333 4492 18533 170498 135767 135767 1 GSESATYVPVAPPTPAWQPEIKPEPAWHDQDETSSVK Unmodified 4030.9225 0.92249113 2961 Q6PKG0 LARP1 La-related protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 85.105 82.673 4 3.9215E-08 100128 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 46.32 38.122 16427000 0 0 16427000 0 0 0 0 0 0 0 0 0 0 0 0 20334 2961 18534 170499 135768 135768 1 GSESHELNEGGDEK Unmodified 1486.6172 0.6171944 2833 Q5VZK9 LRRC16A Leucine-rich repeat-containing protein 16A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 8.2495 8.3802 2;3 7.2737E-17 6781 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 101.43 95.938 180210000 0 0 0 13380000 8512800 10104000 9165900 8574900 8613300 13395000 35389000 23872000 17085000 15609000 16508000 20335 2833 18535 170500;170501;170502;170503;170504;170505;170506;170507;170508;170509;170510;170511;170512;170513;170514;170515;170516;170517;170518;170519;170520;170521;170522;170523 135769;135770;135771;135772;135773;135774;135775;135776;135777;135778;135779;135780;135781;135782 135778 14 GSESPEMGPEVTPAPR Oxidation (M) 1655.7461 0.74610008 1536 P48382 RFX5 DNA-binding protein RFX5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.968 36.15 2 6.486E-15 40296 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 99.5 75.513 264580000 0 0 0 17527000 16296000 17632000 20710000 18818000 15544000 23054000 22650000 34539000 32391000 21509000 23910000 20336 1536 18536 170524;170525;170526;170527;170528;170529;170530;170531;170532;170533;170534;170535 135783;135784;135785;135786;135787;135788;135789;135790;135791;135792;135793;135794 135793 2440 12 GSETDSAQDQPVK Unmodified 1360.6107 0.61065246 1280 P30419 NMT1 Glycylpeptide N-tetradecanoyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12.399 11.875 2 1.4965E-54 15281 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 201.33 171.08 114380000 25427000 13632000 1434000 2662800 2687600 3599400 3198700 2903800 2863300 5393100 8197900 11118000 4339900 8102400 18823000 20337 1280 18537 170536;170537;170538;170539;170540;170541;170542;170543;170544;170545;170546;170547;170548;170549;170550 135795;135796;135797;135798;135799;135800;135801;135802;135803;135804;135805;135806;135807;135808 135801 14 GSETGSETHESDLAPSDK Unmodified 1845.7864 0.78644457 1546 P48634 PRRC2A Protein PRRC2A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.136 20.337 3 3.1387E-30 20596 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 110.37 105.97 122530000 0 0 0 6268800 8762200 9030800 8121900 7897200 8919500 12387000 12499000 12132000 12919000 9878800 13715000 20338 1546 18538 170551;170552;170553;170554;170555;170556;170557;170558;170559;170560;170561;170562 135809;135810;135811;135812;135813;135814;135815;135816;135817;135818;135819;135820 135818 12 GSETPGATPGSK Unmodified 1087.5146 0.51456723 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 9.2495 8.7964 2 2.386E-05 7476 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 91.867 77.085 383060000 31598000 27359000 0 25693000 19570000 21738000 29670000 21888000 14338000 21618000 0 59136000 36891000 26247000 47316000 20339 516 18539 170563;170564;170565;170566;170567;170568;170569;170570;170571;170572;170573;170574;170575 135821;135822;135823;135824;135825;135826;135827;135828;135829;135830;135831;135832;135833 135832 12 GSEVGFHGAAPDISVK Unmodified 1569.7787 0.77872084 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 9.3 2.25 2 21 2 2 2 2 2 2 2 2 2 1 1 2 1 58.761 58.307 2;3 2.9072E-50 76137 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 169.62 123.46 523900000 0 165110000 0 30068000 28735000 24032000 41630000 44485000 32598000 34408000 43174000 11201000 10800000 45869000 11786000 20340 2172 18540 170576;170577;170578;170579;170580;170581;170582;170583;170584;170585;170586;170587;170588;170589;170590;170591;170592;170593;170594;170595;170596;170597;170598 135834;135835;135836;135837;135838;135839;135840;135841;135842;135843;135844;135845;135846;135847;135848;135849;135850;135851;135852;135853;135854;135855 135842 21 GSEVHLQADPTK Unmodified 1280.6361 0.63607935 652 O95391 SLU7 Pre-mRNA-splicing factor SLU7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 25.903 26.201 3 0.010845 27383 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 42.209 28.53 48795000 0 0 0 7451100 0 0 0 6485200 0 0 8431200 10533000 7799400 8095000 0 20341 652 18541 170599;170600;170601;170602;170603;170604 135856;135857;135858 135858 3 GSFEAPRYEGSFPAGPPPTR Unmodified 2119.0123 0.012302606 3876 Q96IF1 AJUBA LIM domain-containing protein ajuba yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 69.653 69.685 3 0.00023902 80021 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 44.788 38.666 41695000 0 0 0 1887200 2188100 3528400 3039800 4199200 4709100 0 7084800 6571800 4700300 3786500 0 20342 3876 18542 170605;170606;170607;170608;170609;170610;170611;170612;170613;170614 135859;135860;135861;135862;135863;135864;135865;135866;135867;135868;135869 135866 11 GSFGELALMYNTPR Oxidation (M) 1570.745 0.74497787 990 P13861;P31323 PRKAR2A;PRKAR2B cAMP-dependent protein kinase type II-alpha regulatory subunit;cAMP-dependent protein kinase type II-beta regulatory subunit yes no 0 1 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 77.65 77.843 2 0.0013322 89074 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 52.693 25.265 12244000 0 0 0 0 0 0 0 0 0 0 0 0 0 4911300 7333000 20343 990 18543 170615;170616;170617;170618 135870;135871;135872 135871 1339 3 GSFGEVFK Unmodified 869.42832 0.42831841 4811;5279 Q9P289;Q9Y6E0 STK26;STK24 Serine/threonine-protein kinase 26;Serine/threonine-protein kinase 24;Serine/threonine-protein kinase 24 36 kDa subunit;Serine/threonine-protein kinase 24 12 kDa subunit no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 53.585 53.726 2 0.020609 59714 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.659 27.766 731220000 0 0 0 31553000 36890000 74990000 63314000 42677000 40301000 80669000 67445000 63366000 56720000 58603000 114690000 20344 4811;5279 18544 170619;170620;170621;170622;170623;170624;170625;170626;170627;170628;170629;170630 135873;135874;135875 135873 3 GSFSALVGR Unmodified 892.47667 0.47666558 2331 Q13619 CUL4A Cullin-4A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 53.61 53.806 2 0.020833 60994 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 52.786 31.239 55008000 0 0 0 0 0 0 0 0 11720000 25337000 0 0 17951000 0 0 20345 2331 18545 170631;170632;170633 135876 135876 1 GSFSDTGLGDGK Unmodified 1139.5095 0.50948185 5122 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34.987 34.418 2 2.8637E-05 36848 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 97.456 88.062 436580000 278350 115200000 0 12481000 16456000 23889000 15492000 15697000 17257000 31689000 32543000 39239000 37414000 29863000 49087000 20346 5122 18546 170634;170635;170636;170637;170638;170639;170640;170641;170642;170643;170644;170645;170646;170647 135877;135878;135879;135880;135881;135882;135883;135884;135885;135886;135887;135888;135889 135881 13 GSFSEQGINEFLR Unmodified 1482.7103 0.71030693 2496 Q15084 PDIA6 Protein disulfide-isomerase A6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.437 80.496 2 2.4215E-107 93205 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 210.87 201.43 468730000 0 0 0 7289800 13521000 45404000 16533000 27387000 18703000 60652000 44330000 58155000 24481000 32383000 119890000 20347 2496 18547 170648;170649;170650;170651;170652;170653;170654;170655;170656;170657;170658;170659 135890;135891;135892;135893;135894;135895;135896;135897;135898;135899;135900;135901;135902 135892 12 GSFSGQAQPLR Unmodified 1146.5782 0.57817054 3636 Q92609 TBC1D5 TBC1 domain family member 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 33.465 33.618 2 0.011554 35589 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.423 26.96 28587000 0 0 0 3813300 4233200 0 0 3703000 0 0 0 8165600 0 0 8672100 20348 3636 18548 170660;170661;170662;170663;170664;170665;170666 135903;135904;135905;135906;135907 135904 5 GSFVNGVFEVHK Unmodified 1318.667 0.66698555 2627 Q16666 IFI16 Gamma-interferon-inducible protein 16 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 65.943 66.084 3 0.028111 75445 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 26.627 18.114 42943000 0 0 0 1489600 0 4081900 1828300 3437600 2586300 3043900 3572700 5043200 2895300 4320200 10643000 20349 2627 18549 170667;170668;170669;170670;170671;170672;170673;170674;170675;170676;170677 135908 135908 1 GSFWRIDPASESK Unmodified 1478.7154 0.7153923 2051 Q01167 FOXK2 Forkhead box protein K2 yes yes 0 0 1 By MS/MS 2 0 1 1 74.309 66.179 3 0.020249 87516 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 33.265 4.9824 17604000 17604000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20350 2051 18550 170678 135909 135909 1 GSGAGVGTTLTPLPPPK Unmodified 1548.8512 0.8511575 3404 Q8NBZ0 INO80E INO80 complex subunit E yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.351 65.439 2 0.0067492 73943 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 45.257 38.873 59595000 0 0 0 2742000 4424900 4184000 3850300 3149600 3977000 4897300 5586600 7500300 6086400 5261600 7935500 20351 3404 18551 170679;170680;170681;170682;170683;170684;170685;170686;170687;170688;170689;170690 135910;135911;135912 135911 3 GSGCIEPASGR Unmodified 1089.4873 0.48730662 3123 Q7Z7F0 KIAA0907 UPF0469 protein KIAA0907 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 14.6 14.768 2 0.014839 13584 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.158 35.944 37823000 0 0 0 0 2243300 3668900 3660300 0 0 3535900 6204500 0 3414500 6060100 9035500 20352 3123 18552 170691;170692;170693;170694;170695;170696;170697;170698 135913;135914 135914 2 GSGFGHNGVDGNGVGQSQAGSGSTPSEPHPVLEK Unmodified 3246.4926 0.4926096 5227 Q9Y5A9 YTHDF2 YTH domain-containing family protein 2 yes yes 0 0 0 By MS/MS 10 0 1 1 49.648 49.87 4 0.022412 55522 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 15.934 13.395 16448000 0 0 0 0 0 0 0 0 0 0 0 0 0 16448000 0 20353 5227 18553 170699 135915;135916 135916 2 GSGFTVTGGTEELPEEEGGGGSGGRR Unmodified 2479.1211 0.12113737 3709 Q93074 MED12 Mediator of RNA polymerase II transcription subunit 12 yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 57.312 57.415 3 0.0013951 65358 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 24.459 21.244 10071000 0 0 0 0 0 5082000 0 0 0 4989100 0 0 0 0 0 20354 3709 18554 170700;170701 135917 135917 1 GSGGGGPASASGPAASESRPLPR Unmodified 2021.9879 0.98787877 5287 Q9Y6J9 TAF6L TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 33.72 34.14 3 0.002366 37527 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 46.578 38.93 42179000 0 0 0 0 0 0 0 0 0 9741900 12249000 0 11053000 0 9135600 20355 5287 18555 170702;170703;170704;170705;170706 135918;135919;135920 135918 3 GSGGGSSGGSIGGR Unmodified 1091.4956 0.49556312 780 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.2981 6.4188 2 2.7477E-72 4160 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 187.85 170.61 + 1583200000 0 0 0 118800000 108010000 205030000 140640000 633100000 114960000 46835000 45713000 63011000 60872000 27149000 19042000 20356 780 18556 170707;170708;170709;170710;170711;170712;170713;170714;170715;170716;170717;170718 135921;135922;135923;135924;135925;135926;135927;135928;135929;135930;135931 135926 9 GSGGGSSGGSIGGRGSSSGGVK Unmodified 1750.8194 0.81941646 780 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 1 2 2 2 2 8.4244 8.542 2;3 1.1632E-77 5787 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 143.4 131.97 + 2111600000 0 0 0 228180000 38706000 59304000 56447000 221850000 41984000 61349000 241040000 798890000 220580000 83871000 59443000 20357 780 18557 170719;170720;170721;170722;170723;170724;170725;170726;170727;170728;170729;170730;170731;170732;170733;170734;170735;170736;170737;170738;170739;170740;170741 135932;135933;135934;135935;135936;135937;135938;135939;135940;135941;135942;135943;135944;135945 135937 12 GSGGLFSPSTAHVPDGALGQR Unmodified 2009.9919 0.99190151 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.83 71.896 3 2.7234E-07 82512 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 65.149 55.619 449880000 0 0 0 17827000 18713000 39197000 28428000 30188000 29125000 42457000 35529000 56090000 33022000 38986000 80321000 20358 4285 18558 170742;170743;170744;170745;170746;170747;170748;170749;170750;170751;170752;170753 135946;135947;135948;135949;135950;135951;135952;135953;135954;135955;135956;135957;135958;135959 135953 13 GSGGLGGACGGAGFGSR Unmodified 1423.6263 0.62625972 66;58;779 P04259;CON__P02538;P02538;CON__P04259 KRT6B;KRT6A Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 6A no no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 38.565 38.694 2 3.8478E-25 42773 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 109 99.044 + 235830000 0 0 0 79290000 16759000 4862600 8736400 14532000 4474000 15502000 8039900 14194000 60234000 9206700 0 20359 779;58;66 18559 170754;170755;170756;170757;170758;170759;170760;170761;170762;170763;170764 135960;135961;135962;135963;135964;135965;135966;135967;135968;135969 135966 10 GSGIFDESTPVQTR Unmodified 1492.7158 0.71578623 4460 Q9H910 HN1L Hematological and neurological expressed 1-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 59.71 58.656 2 1.1408E-49 66927 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 174.4 156.66 301250000 0 130630000 2299100 10611000 0 0 0 0 0 0 31991000 30041000 10131000 25945000 59596000 20360 4460 18560 170765;170766;170767;170768;170769;170770;170771;170772 135970;135971;135972;135973;135974;135975 135972 6 GSGIFDESTPVQTRQHLNPPGGK Unmodified 2421.2037 0.2036852 4460 Q9H910 HN1L Hematological and neurological expressed 1-like protein yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 67.158 60.375 3;4 3.8568E-12 80971 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.773 67.949 332430000 328790000 0 3647500 0 0 0 0 0 0 0 0 0 0 0 0 20361 4460 18561 170773;170774;170775 135976;135977;135978;135979 135979 3 GSGLGSPTSSFNSTVFGPSSLNSLR Unmodified 2455.1979 0.19793112 340 O43524 FOXO3 Forkhead box protein O3 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 87.05 87.183 3 0.0018397 100822 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 26.157 21.504 8828500 0 0 0 0 0 0 0 0 0 3390400 0 0 0 0 5438100 20362 340 18562 170776;170777 135980 135980 1 GSGNLEAIHIIK Unmodified 1250.6983 0.69828568 1980 P78371 CCT2 T-complex protein 1 subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.86 3.52 1 7 2 27 5 2 3 2 2 2 2 2 2 2 2 3 3 2 3 62.776 61.632 2;3 2.3025E-31 83307 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 190.57 117.34 15853000000 6746600000 2831000000 2410600000 171790000 149330000 306060000 244880000 252450000 150510000 338460000 336270000 292180000 274380000 283330000 1065600000 20363 1980 18563 170778;170779;170780;170781;170782;170783;170784;170785;170786;170787;170788;170789;170790;170791;170792;170793;170794;170795;170796;170797;170798;170799;170800;170801;170802;170803;170804;170805;170806;170807;170808;170809;170810;170811;170812;170813;170814 135981;135982;135983;135984;135985;135986;135987;135988;135989;135990;135991;135992;135993;135994;135995;135996;135997;135998;135999;136000;136001;136002;136003;136004;136005;136006;136007;136008;136009;136010;136011;136012;136013;136014;136015;136016;136017;136018;136019;136020;136021 136001 26 GSGPPPTEEEEGER Unmodified 1469.627 0.62703081 5059 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 16.859 17.095 2 0.025292 15546 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 33.225 16.199 11290000 0 0 0 0 1299900 0 0 1017700 0 1740000 1273100 0 0 2963100 2996200 20364 5059 18564 170815;170816;170817;170818;170819;170820 136022;136023 136022 2 GSGPPPTEEEEGERALREK Unmodified 2066.9869 0.98687572 5059 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 yes yes 0 0 2 By MS/MS By MS/MS 2 0 3 1 2 39.838 35.258 3;4 0.00046531 44630 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 59.434 55.466 44326000 9546400 0 34779000 0 0 0 0 0 0 0 0 0 0 0 0 20365 5059 18565 170821;170822;170823 136024;136025;136026 136026 2 GSGQQPVSLQEAK Unmodified 1327.6732 0.67319314 4364 Q9H2F5 EPC1 Enhancer of polycomb homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 31.107 31.283 2 0.00069093 33581 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 90.05 75.844 95035000 0 0 0 5390300 6714600 7857900 7141600 6203700 5072300 10493000 11317000 15013000 0 9705500 10126000 20366 4364 18566 170824;170825;170826;170827;170828;170829;170830;170831;170832;170833;170834 136027;136028;136029;136030;136031;136032;136033;136034;136035;136036 136033 10 GSGRPRPQALLQDPPEPGPCGER Unmodified 2470.2135 0.21353838 904 P0CW18 PRSS56 Serine protease 56 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 53.805 54.162 4 0.00023615 60522 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 34.474 26.852 71358000 0 0 0 0 0 0 0 8682600 0 13474000 6740100 13113000 6015700 8442100 14891000 20367 904 18567 170835;170836;170837;170838;170839;170840;170841 136037;136038;136039;136040;136041;136042;136043 136038 7 GSGSEQEGEDEEGGERK Unmodified 1778.7191 0.71909329 2945 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog yes yes 0 0 1 By MS/MS 10 0 1 1 6.1199 6.3118 3 0.0038693 4216 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 33.697 22.224 6536100 0 0 0 0 0 0 0 0 0 0 0 0 6536100 0 0 20368 2945 18568 170842 136044 136044 1 GSGSGQSPSSGQHGTGFGR Unmodified 1746.767 0.76698696 104 CON__Q86YZ3;Q86YZ3 HRNR Hornerin yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 14.235 14.397 2;3 1.9721E-41 13726 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 119.32 110.36 + 1124200000 0 0 0 126630000 56269000 65058000 34058000 248860000 34435000 110880000 62507000 130140000 133530000 56872000 64945000 20369 104 18569 170843;170844;170845;170846;170847;170848;170849;170850;170851;170852;170853;170854;170855;170856;170857;170858;170859;170860;170861;170862;170863;170864;170865;170866 136045;136046;136047;136048;136049;136050;136051;136052;136053;136054;136055;136056;136057 136046 12 GSGSGQSPSYGR Unmodified 1138.5003 0.50031415 104 CON__Q86YZ3;Q86YZ3 HRNR Hornerin yes no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 8.7341 8.8676 2 2.6388E-23 7247 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 192.26 188.13 + 141630000 0 0 0 15903000 7328100 11003000 7232000 33394000 5933800 8628200 15908000 11811000 14346000 4986600 5152100 20370 104 18570 170867;170868;170869;170870;170871;170872;170873;170874;170875;170876;170877;170878 136058;136059;136060;136061;136062;136063;136064;136065;136066;136067 136063 7 GSGSQSSVPSVDQFTGVGIR Unmodified 1963.9599 0.95993268 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 0 0 By matching By matching By matching By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 77.422 77.45 3 0.0017176 89581 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 23.658 18.756 40111000 0 0 0 1406600 0 8098100 3660800 0 0 8111800 0 0 0 5144900 13689000 20371 5071 18571 170879;170880;170881;170882;170883;170884 136068 136068 1 GSGSRQSPSYGR Unmodified 1237.58 0.57996145 104 CON__Q86YZ3;Q86YZ3 HRNR Hornerin yes no 0 0 1 By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 6.6893 6.833 3 0.0021353 5033 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 61.11 44.478 + 34796000 0 0 0 4658700 0 2848500 0 2378600 0 2909400 4776200 10339000 6445500 0 440900 20372 104 18572 170885;170886;170887;170888;170889;170890;170891;170892 136069;136070;136071 136070 3 GSGTAEVELK Unmodified 989.50294 0.50293991 1000 P14618 PKM Pyruvate kinase PKM yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.88 3.97 1 10 2 12 6 5 2 1 1 1 1 1 1 1 1 1 1 1 1 30.894 29.713 2 1.1987E-05 32657 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 133.57 106.05 9899100000 1563400000 5316100000 63828000 96447000 134460000 245650000 179410000 174190000 165350000 233450000 442560000 419690000 88110000 192810000 583740000 20373 1000 18573 170893;170894;170895;170896;170897;170898;170899;170900;170901;170902;170903;170904;170905;170906;170907;170908;170909;170910;170911;170912;170913;170914;170915;170916;170917 136072;136073;136074;136075;136076;136077;136078;136079;136080;136081;136082;136083;136084;136085;136086;136087;136088;136089;136090;136091;136092;136093;136094;136095;136096;136097;136098;136099;136100;136101;136102;136103;136104;136105;136106;136107;136108 136079 36 GSGTAEVELKK Unmodified 1117.5979 0.59790293 1000 P14618 PKM Pyruvate kinase PKM yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 18.611 17.917 2 1.5267E-13 17944 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 145.9 119.52 1680300000 104640000 1147700000 0 25655000 22399000 9152200 36043000 34914000 11162000 24234000 57983000 94438000 14696000 31153000 66143000 20374 1000 18574 170918;170919;170920;170921;170922;170923;170924;170925;170926;170927;170928;170929;170930;170931;170932 136109;136110;136111;136112;136113;136114;136115;136116;136117;136118;136119;136120;136121;136122 136119 4 GSGTASDDEFENLR Unmodified 1496.6379 0.63792984 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.535 48.695 2 0.0011573 53776 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.014 70.061 234740000 0 0 0 12798000 8914500 25274000 10814000 11331000 9460800 27158000 29761000 27712000 17646000 20434000 33432000 20375 3119 18575 170933;170934;170935;170936;170937;170938;170939;170940;170941;170942;170943;170944 136123;136124;136125;136126;136127 136125 5 GSGTGAAGASDTTIK Unmodified 1292.6208 0.62082322 1601;32 P49792;P0DJD0;P0DJD1;A6NKT7;Q7Z3J3 RANBP2;RGPD1;RGPD2;RGPD3;RGPD4 E3 SUMO-protein ligase RanBP2;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RanBP2-like and GRIP domain-containing protein 3;RanBP2-like and GRIP domain-containing protein 4 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.807 16.987 2 0.00028532 15347 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 67.456 50.431 65059000 0 0 0 2986300 3057900 7054300 5001300 3358200 4307200 3933700 6381800 5742900 7506500 5979300 9749400 20376 1601;32 18576 170945;170946;170947;170948;170949;170950;170951;170952;170953;170954;170955;170956 136128;136129;136130;136131;136132;136133;136134;136135;136136;136137 136134 10 GSGVAQSPQQPPPQQQQQQPPQQPTPPK Unmodified 2987.4849 0.48494544 2988 Q6VY07 PACS1 Phosphofurin acidic cluster sorting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 41.76 41.825 3 2.0362E-05 46165 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 31.41 28.871 42201000 0 0 0 4285200 3719400 4637800 4228100 3522700 3349500 5876500 0 0 0 4826700 7755200 20377 2988 18577 170957;170958;170959;170960;170961;170962;170963;170964;170965 136138;136139;136140;136141;136142 136139 5 GSGVHGGLMVLEPR Unmodified 1407.7293 0.72926823 3180 Q86W92 PPFIBP1 Liprin-beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.386 61.488 3 0.0027355 70104 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 45.992 29.855 135830000 0 0 0 4552400 3833000 6570400 5813600 12753000 5982400 13232000 12650000 14626000 9657500 12537000 33627000 20378 3180 18578 170966;170967;170968;170969;170970;170971;170972;170973;170974;170975;170976;170977 136143;136144;136145;136146;136147;136148;136149;136150;136151;136152 136144 10 GSGVHGGLMVLEPR Oxidation (M) 1423.7242 0.72418285 3180 Q86W92 PPFIBP1 Liprin-beta-1 yes yes 0 1 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 1 1 1 1 2 2 1 2 1 1 51.046 51.214 3 9.9374E-05 57980 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 76.759 60.87 395590000 0 0 0 18090000 18142000 22411000 22449000 23809000 17620000 71179000 98639000 32125000 37150000 0 33981000 20379 3180 18578 170978;170979;170980;170981;170982;170983;170984;170985;170986;170987;170988;170989;170990;170991;170992 136153;136154;136155;136156;136157;136158;136159;136160;136161;136162;136163;136164;136165 136153 4800 10 GSGVNAAGDGTIR Unmodified 1173.5738 0.57381344 1146 P22735 TGM1 Protein-glutamine gamma-glutamyltransferase K yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 22.222 22.388 2 3.4896E-09 23746 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 113.69 78.391 52714000 0 0 0 15622000 2208000 3666800 2147100 6488000 0 3297100 5119700 6391400 4543600 3230000 0 20380 1146 18579 170993;170994;170995;170996;170997;170998;170999;171000;171001;171002 136166;136167;136168 136168 3 GSGVTTYSVHPGTVQSELVR Unmodified 2073.0491 0.049082043 3486 Q8TC12 RDH11 Retinol dehydrogenase 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 63.257 63.267 3 0.026023 72359 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 23.726 15.247 17058000 0 0 0 0 4902300 0 0 0 0 0 8442000 0 0 3714000 0 20381 3486 18580 171003;171004;171005 136169 136169 1 GSGWLYHSDAIR Unmodified 1360.6524 0.65239812 2346 Q13835 PKP1 Plakophilin-1 yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 54.641 54.802 3 0.00010587 62483 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 70.089 52.878 51249000 0 0 0 0 0 2657700 0 43554000 0 0 0 0 5038100 0 0 20382 2346 18581 171006;171007;171008 136170;136171 136171 2 GSHEEEPVK Unmodified 1010.4669 0.46688876 4800 Q9P0W2 HMG20B SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 6.801 3.5003 2 0.00050548 5029 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 127.56 100.04 135620000 0 135620000 0 0 0 0 0 0 0 0 0 0 0 0 0 20383 4800 18582 171009;171010 136172;136173 136173 2 GSHFFPGNNVIYEK Unmodified 1607.7732 0.77324153 3566 Q8WVV4 POF1B Protein POF1B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 63.677 63.697 3 0.00020829 72519 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 64.394 56.079 98683000 0 0 0 32965000 3789900 5719500 2905900 22530000 0 7009000 5933800 12439000 5391400 0 0 20384 3566 18583 171011;171012;171013;171014;171015;171016;171017;171018;171019 136174;136175;136176;136177;136178;136179;136180;136181 136177 8 GSIDEVDK Unmodified 861.40798 0.40797689 5036 Q9UNM6 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 7.33 3.77 3 6 1 1 1 1 1 1 1 1 1 15.958 14.96 2 0.0099634 14987 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 81.191 40.505 383600000 36415000 117110000 1653500 0 15793000 20774000 0 0 0 39542000 62883000 64192000 0 25232000 0 20385 5036 18584 171020;171021;171022;171023;171024;171025;171026;171027;171028 136182;136183;136184;136185 136184 4 GSIDREDGSLQGPIGNQHIYQPVGKPDPAAPPK Unmodified 3437.7328 0.73278029 2114 Q05397 PTK2 Focal adhesion kinase 1 yes yes 0 0 2 By MS/MS By MS/MS 10 0 2 1 1 63.965 64.346 5 5.4638E-09 72828 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.173 34.219 23743000 0 0 0 0 0 0 0 0 0 0 0 0 0 6128200 17615000 20386 2114 18585 171029;171030 136186;136187 136186 2 GSIEIPLR Unmodified 883.51272 0.51271674 2945 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.362 64.453 2 0.006213 73368 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 102.77 48.009 231760000 0 0 0 10135000 9054900 15535000 10981000 7192800 10417000 18823000 26354000 26031000 22861000 31345000 43030000 20387 2945 18586 171031;171032;171033;171034;171035;171036;171037;171038;171039;171040;171041;171042 136188;136189;136190;136191;136192;136193;136194;136195;136196;136197;136198;136199 136197 12 GSIFVVFDSIESAK Unmodified 1497.7715 0.7715102 811 P05455 SSB Lupus La protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.43 2.72 4 2 1 2 2 2 1 96.029 92.896 2 1.8291E-15 115850 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 145.91 127.6 246240000 185030000 48859000 11151000 0 0 0 0 0 0 0 0 0 0 0 1205500 20388 811 18587 171043;171044;171045;171046;171047;171048;171049 136200;136201;136202;136203;136204;136205;136206 136204 7 GSIRPSISNPR Unmodified 1182.6469 0.64691881 3665 Q92805 GOLGA1 Golgin subfamily A member 1 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 27.637 27.791 3 0.0052165 29971 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 53.237 40.661 83680000 0 0 0 7991200 6761900 9489500 6096500 9753300 0 10945000 9848100 0 9416600 6410500 6967300 20389 3665 18588 171050;171051;171052;171053;171054;171055;171056;171057;171058;171059;171060 136207;136208;136209;136210;136211;136212;136213;136214;136215;136216 136207 9 GSISTPNSPVK Unmodified 1085.5717 0.57168818 3745 Q96AY4 TTC28 Tetratricopeptide repeat protein 28 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 32.565 32.824 2 0.043105 34713 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 36.334 22.338 9880700 0 0 0 0 0 3529200 0 0 0 0 4430100 0 0 1921400 0 20390 3745 18589 171061;171062;171063 136217 136217 1 GSISVFEVDGKK Unmodified 1264.6663 0.66631685 635 O95251 KAT7 Histone acetyltransferase KAT7 yes yes 0 0 1 By MS/MS 10 0 1 1 51.439 52.144 2 0.01345 58571 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 66.19 32.812 6458000 0 0 0 0 0 0 0 0 0 0 0 6458000 0 0 0 20391 635 18590 171064 136218 136218 1 GSITEYTAAEEK Unmodified 1297.6038 0.60377617 2220 Q12982 BNIP2 BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 38.631 38.084 2 1.5017E-09 47895 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 141.95 119.87 277720000 0 165900000 0 6303900 6887800 9152400 7528700 7448500 6266100 13167000 13302000 11417000 7789700 8123600 14437000 20392 2220 18591 171065;171066;171067;171068;171069;171070;171071;171072;171073;171074;171075;171076;171077;171078 136219;136220;136221;136222;136223;136224;136225;136226;136227;136228;136229;136230 136221 12 GSITHGTPADVLYK Unmodified 1457.7514 0.75144346 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 2 2 1 2 2 1 2 1 2 2 1 52.108 52.099 2;3 2.1722E-05 58378 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 87.568 60.453 140500000 0 0 0 15792000 17366000 7996700 20469000 25256000 3515500 25939000 0 0 9251100 6656400 8258900 20393 5262 18592 171079;171080;171081;171082;171083;171084;171085;171086;171087;171088;171089;171090;171091;171092;171093;171094;171095;171096 136231;136232;136233;136234;136235;136236;136237;136238;136239;136240;136241;136242;136243;136244;136245 136236 7 GSITISAEEIK Unmodified 1146.6132 0.61321864 458 O75131 CPNE3 Copine-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 58.387 57.056 2 0.00043848 64994 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 85.29 39.162 392870000 25686000 264150000 4162100 8827300 6551100 9241100 6301600 6763700 5775200 8901900 9033500 11831000 5334600 5329000 14982000 20394 458 18593 171097;171098;171099;171100;171101;171102;171103;171104;171105;171106;171107;171108;171109;171110;171111;171112 136246;136247;136248;136249;136250;136251;136252;136253;136254;136255;136256;136257;136258;136259;136260 136248 14 GSITQGIPR Unmodified 927.51378 0.51377937 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 38.546 38.613 2 0.022062 41592 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 51.736 27.062 132630000 0 0 0 11053000 10702000 11763000 12985000 12269000 10800000 15420000 17635000 0 16088000 13918000 0 20395 5262 18594 171113;171114;171115;171116;171117;171118;171119;171120;171121;171122 136261;136262 136262 2 GSITQGTPALPQTGIPTEALVK Unmodified 2178.1896 0.18959827 488 O75376 NCOR1 Nuclear receptor corepressor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 2 2 2 2 1 2 2 2 2 2 2 83.432 83.51 2;3 6.1738E-07 97008 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 54.857 50.962 297620000 0 0 0 1296800 13282000 15430000 14009000 25363000 18826000 36487000 28724000 41046000 23507000 26114000 53533000 20396 488 18595 171123;171124;171125;171126;171127;171128;171129;171130;171131;171132;171133;171134;171135;171136;171137;171138;171139;171140;171141;171142;171143;171144 136263;136264;136265;136266;136267;136268;136269;136270;136271;136272;136273;136274;136275;136276 136273 14 GSIVWQEVFDDK Unmodified 1421.6827 0.68269519 845 P07686 HEXB Beta-hexosaminidase subunit beta;Beta-hexosaminidase subunit beta chain B;Beta-hexosaminidase subunit beta chain A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 88.869 84.205 2 0.00016732 106661 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.456 61.945 44700000 8110800 32987000 3602300 0 0 0 0 0 0 0 0 0 0 0 0 20397 845 18596 171145;171146;171147;171148 136277;136278;136279;136280 136279 3 GSLAEAVGSPPPAATPTPTPPTRK Unmodified 2299.2172 0.21721 5284 Q9Y6I3 EPN1 Epsin-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 2 1 1 1 1 1 1 1 1 1 1 60.798 60.958 3 1.1661E-27 68849 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.73 89.462 72780000 0 0 0 3215900 0 4020100 3985700 4909400 3538500 8299400 9348700 8404500 8902300 6103300 12053000 20398 5284 18597 171149;171150;171151;171152;171153;171154;171155;171156;171157;171158;171159;171160 136281;136282;136283;136284;136285;136286;136287;136288;136289;136290;136291;136292 136284 12 GSLASLDSLRK Unmodified 1145.6404 0.64043645 426 O60716 CTNND1 Catenin delta-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 1 2 2 2 2 2 2 2 2 2 2 2 49.68 49.87 2;3 0.0059159 56343 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 43.544 24.798 420820000 0 0 0 15493000 22977000 35841000 32613000 38456000 26388000 26122000 35325000 45049000 37912000 34233000 70416000 20399 426 18598 171161;171162;171163;171164;171165;171166;171167;171168;171169;171170;171171;171172;171173;171174;171175;171176;171177;171178;171179;171180;171181;171182;171183 136293;136294;136295;136296;136297;136298;136299;136300;136301;136302;136303;136304 136301 9 GSLDPESIFEMMETGK Oxidation (M) 1785.7801 0.78010233 2478 Q15024 EXOSC7 Exosome complex component RRP42 yes yes 0 1 0 By MS/MS 2.33 0.471 2 1 3 94.07 89.753 2 0.00013391 114067 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.295 76.756 42140000 0 42140000 0 0 0 0 0 0 0 0 0 0 0 0 0 20400 2478 18599 171184;171185;171186 136305;136306;136307 136306 4087 3 GSLDPESIFEMMETGK Unmodified 1769.7852 0.78518771 2478 Q15024 EXOSC7 Exosome complex component RRP42 yes yes 0 0 0 By MS/MS 2 0 2 2 99.507 94.794 2 1.6156E-58 117060 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 177.83 168.18 56253000 0 56253000 0 0 0 0 0 0 0 0 0 0 0 0 0 20401 2478 18599 171187;171188 136308;136309 136308 1 GSLEEAEAER Unmodified 1089.4938 0.49383179 4577 Q9NQW6 ANLN Actin-binding protein anillin yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 23.341 23.56 2 0.0044926 25235 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 72.643 54.608 84164000 0 0 0 0 7061000 7485600 0 6885600 5339600 13820000 8365600 13622000 12475000 9110400 0 20402 4577 18600 171189;171190;171191;171192;171193;171194;171195;171196;171197;171198 136310;136311;136312;136313;136314;136315;136316;136317 136317 8 GSLENVLDSK Unmodified 1060.5401 0.5400537 1420 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 52.896 53.366 2 0.0049526 60696 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 70.908 34.067 26296000 0 0 0 0 0 0 0 0 0 0 0 0 6402400 0 19894000 20403 1420 18601 171199;171200 136318 136318 1 GSLESPATDVFGSTEEGEK Unmodified 1938.8694 0.86944592 130 O00232 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 6 2 22 1 6 1 2 2 2 2 2 1 2 2 2 1 2 2 70.212 69.244 2;3 0 79649 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 283.21 265.55 2931200000 6631300 1854400000 2244500 59888000 66372000 105070000 45303000 37065000 32331000 140400000 169610000 222170000 38860000 49803000 101070000 20404 130 18602 171201;171202;171203;171204;171205;171206;171207;171208;171209;171210;171211;171212;171213;171214;171215;171216;171217;171218;171219;171220;171221;171222;171223;171224;171225;171226;171227;171228;171229;171230 136319;136320;136321;136322;136323;136324;136325;136326;136327;136328;136329;136330;136331;136332;136333;136334;136335;136336 136334 18 GSLESPATDVFGSTEEGEKR Unmodified 2094.9706 0.97055695 130 O00232 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 0 0 1 By MS/MS 10 0 1 1 62.352 62.819 3 2.7804E-09 71615 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 72.771 64.271 22806000 0 0 0 0 0 0 0 0 0 0 0 22806000 0 0 0 20405 130 18603 171231 136337 136337 1 GSLEVLNLK Unmodified 971.56515 0.56514624 5146 Q9Y3A5 SBDS Ribosome maturation protein SBDS yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 70.738 70.035 2 0.00063513 89511 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.13 66.687 1245900000 0 777630000 36746000 27076000 23075000 40723000 34407000 20463000 19740000 43008000 44002000 55672000 26459000 28028000 68889000 20406 5146 18604 171232;171233;171234;171235;171236;171237;171238;171239;171240;171241;171242;171243;171244;171245;171246 136338;136339;136340;136341;136342;136343;136344;136345;136346;136347;136348;136349;136350;136351;136352;136353 136342 12 GSLFGGSVK Unmodified 850.45487 0.45486751 3549 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 43.38 43.63 2 0.04445 48945 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 43.442 9.8916 137950000 0 0 0 0 5351400 16890000 10934000 10576000 0 14218000 13085000 19308000 14109000 10816000 22658000 20407 3549 18605 171247;171248;171249;171250;171251;171252;171253;171254;171255;171256 136354 136354 1 GSLGATGEIK Unmodified 931.49746 0.4974606 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 26.949 26.799 2 0.0065119 29392 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 64.711 27.618 760930000 0 70287000 0 12685000 0 0 59952000 22769000 57400000 100280000 104220000 115140000 72607000 53211000 92384000 20408 2172 18606 171257;171258;171259;171260;171261;171262;171263;171264;171265;171266;171267 136355;136356;136357;136358;136359;136360;136361;136362;136363;136364;136365;136366;136367;136368 136358 14 GSLGEERNPTSK Unmodified 1273.6262 0.62624295 3143 Q86U86 PBRM1 Protein polybromo-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12.566 11.963 3 0.0046377 10599 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 37.525 14.607 173120000 3824500 26807000 35852000 6542000 5528700 10424000 9046500 5809900 6595600 11260000 0 12338000 14746000 11468000 12880000 20409 3143 18607 171268;171269;171270;171271;171272;171273;171274;171275;171276;171277;171278;171279;171280;171281 136369;136370;136371;136372;136373;136374;136375;136376;136377;136378 136378 5 GSLGGGFSSGGFSGGSFSR Unmodified 1706.7649 0.76486169 72 CON__P13645;P13645 KRT10 Keratin, type I cytoskeletal 10 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 58 6 5 4 4 7 4 4 5 5 4 6 4 74.132 74.185 2;3 3.5865E-109 83504 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 225.32 214.42 + 14066000000 0 0 0 2022300000 653090000 1164600000 515640000 2658200000 356070000 1186200000 1053600000 2052800000 998680000 591260000 813600000 20410 72 18608 171282;171283;171284;171285;171286;171287;171288;171289;171290;171291;171292;171293;171294;171295;171296;171297;171298;171299;171300;171301;171302;171303;171304;171305;171306;171307;171308;171309;171310;171311;171312;171313;171314;171315;171316;171317;171318;171319;171320;171321;171322;171323;171324;171325;171326;171327;171328;171329;171330;171331;171332;171333;171334;171335;171336;171337;171338;171339 136379;136380;136381;136382;136383;136384;136385;136386;136387;136388;136389;136390;136391;136392;136393;136394;136395;136396;136397;136398;136399;136400;136401;136402;136403;136404;136405;136406;136407;136408;136409;136410;136411;136412;136413;136414;136415;136416;136417;136418;136419;136420;136421;136422;136423;136424;136425;136426;136427;136428;136429;136430;136431;136432;136433;136434;136435 136424 51 GSLGGGYSSGGFSGGSFSR Unmodified 1722.7598 0.75977631 57 CON__P02535-1 yes yes 0 0 0 By MS/MS 10 0 1 1 80.703 80.893 2 0.01917 93583 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 36.944 33.52 + 1978400 0 0 0 0 0 0 0 1978400 0 0 0 0 0 0 0 20411 57 18609 171340 136436 136436 0 GSLGPWGTGK Unmodified 958.48723 0.48723027 10 A1X283 SH3PXD2B SH3 and PX domain-containing protein 2B yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 53.717 46.766 2 0.020154 63956 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.654 44.099 50265000 36553000 13711000 0 0 0 0 0 0 0 0 0 0 0 0 0 20412 10 18610 171341;171342 136437;136438 136437 2 GSLGQGTAPVLPGK Unmodified 1280.7089 0.70885036 2289 Q13428 TCOF1 Treacle protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 53.151 51.837 2 3.7931E-20 58089 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 183.85 130.08 1396700000 26647000 527510000 2785300 49968000 50063000 50337000 54451000 54471000 49439000 73098000 97488000 106060000 74563000 74115000 105700000 20413 2289 18611 171343;171344;171345;171346;171347;171348;171349;171350;171351;171352;171353;171354;171355;171356;171357;171358 136439;136440;136441;136442;136443;136444;136445;136446;136447;136448;136449;136450;136451;136452;136453;136454 136452 15 GSLGSQGAKDEPEEELQK Unmodified 1900.9014 0.90141475 2289 Q13428 TCOF1 Treacle protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34.94 34.266 3 1.7149E-53 37957 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 132.13 113.68 411880000 12827000 38872000 0 25044000 25094000 13120000 30537000 25291000 15800000 30090000 47279000 52885000 24197000 29003000 41838000 20414 2289 18612 171359;171360;171361;171362;171363;171364;171365;171366;171367;171368;171369;171370;171371;171372 136455;136456;136457;136458;136459;136460;136461;136462;136463;136464;136465;136466;136467;136468;136469 136469 13 GSLIITFDVDFPK Unmodified 1450.7708 0.77078192 4855 Q9UBS4 DNAJB11 DnaJ homolog subfamily B member 11 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 97.754 91.932 2 0.002629 116266 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.685 81.927 22287000 22287000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20415 4855 18613 171373;171374 136470;136471 136471 1 GSLLFTAGPLEEER Unmodified 1517.7726 0.77257283 1708 P53004 BLVRA Biliverdin reductase A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.487 82.549 2 2.236E-19 95090 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 136.48 103.1 103810000 0 0 0 1149400 2843300 5438300 3881900 4475100 2770100 6291200 8290500 10158000 6119200 10104000 42285000 20416 1708 18614 171375;171376;171377;171378;171379;171380;171381;171382;171383;171384;171385;171386 136472;136473;136474;136475;136476;136477;136478;136479;136480;136481;136482;136483;136484;136485;136486;136487;136488 136477 17 GSLLGCSIDITSAADSEAITFQK Unmodified 2383.1577 0.15770579 1057 P17655 CAPN2 Calpain-2 catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 1 3 1 92.039 87.649 2;3 2.9982E-30 109635 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.05 102.25 80203000 7603100 67323000 5277800 0 0 0 0 0 0 0 0 0 0 0 0 20417 1057 18615 171387;171388;171389;171390;171391 136489;136490;136491;136492;136493 136489 5 GSLLIDSSTIDPAVSK Unmodified 1601.8512 0.85121708 1306 P31937 HIBADH 3-hydroxyisobutyrate dehydrogenase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 80.664 77.128 2 0.00039525 95366 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.38 58.453 193890000 0 192030000 1863000 0 0 0 0 0 0 0 0 0 0 0 0 20418 1306 18616 171392;171393;171394 136494;136495;136496 136494 3 GSLLSEADVR Unmodified 1045.5404 0.54038805 2285 Q13421 MSLN Mesothelin;Megakaryocyte-potentiating factor;Mesothelin, cleaved form yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 53.201 53.258 2 0.0024367 61328 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 83.623 29.012 136600000 0 0 0 0 24127000 0 0 0 0 0 47255000 0 65218000 0 0 20419 2285 18617 171395;171396;171397 136497 136497 1 GSLLTLQR Unmodified 886.52362 0.52361577 2191 Q12797 ASPH Aspartyl/asparaginyl beta-hydroxylase yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 54.227 54.307 2 0.012197 61336 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 75.189 0.75076 45577000 0 0 0 6031700 4055300 0 0 3444900 2847300 4838700 7302600 10496000 6560900 0 0 20420 2191 18618 171398;171399;171400;171401;171402;171403;171404;171405 136498;136499;136500;136501;136502;136503 136500 6 GSLPANVPTPR Unmodified 1107.6037 0.60365701 1329 P33240 CSTF2 Cleavage stimulation factor subunit 2 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 50.217 50.291 2 0.0014991 57389 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 72.325 47.431 176960000 0 0 0 13493000 11945000 0 18083000 16865000 0 4527200 29931000 0 0 25819000 56303000 20421 1329 18619 171406;171407;171408;171409;171410;171411;171412;171413 136504;136505 136505 2 GSLPDTQPSQGPSTPK Unmodified 1595.7791 0.77911477 3205 Q86Y91 KIF18B Kinesin-like protein KIF18B yes yes 0 0 0 By matching By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 35.567 35.989 2 0.019441 39307 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 31.639 21.686 12700000 0 0 0 0 0 0 0 0 0 3438500 3463100 0 2370000 0 3428000 20422 3205 18620 171414;171415;171416;171417 136506 136506 1 GSLPSGTTIEWLEPK Unmodified 1613.8301 0.83008771 4222 Q9BXB4 OSBPL11 Oxysterol-binding protein-related protein 11 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 83.888 84.036 2 0.031032 96899 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 35.594 25.071 45269000 0 0 0 0 0 3423900 0 5051600 3472500 7084600 8887900 5805300 0 0 11543000 20423 4222 18621 171418;171419;171420;171421;171422;171423;171424 136507 136507 1 GSLQPAPAQPPGDPAAQASVSNGEDAGGGAGR Unmodified 2886.3492 0.34923982 188 O14562 UBFD1 Ubiquitin domain-containing protein UBFD1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 56.772 56.809 3 2.7698E-47 63994 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.937 79.504 40182000 0 0 0 6269200 2515000 0 0 0 0 0 0 9131300 0 5391100 16875000 20424 188 18622 171425;171426;171427;171428;171429;171430 136508;136509;136510;136511;136512;136513;136514;136515 136509 8 GSLQPAPAQPPGDPAAQASVSNGEDAGGGAGRELVDLK Unmodified 3583.7503 0.75028085 188 O14562 UBFD1 Ubiquitin domain-containing protein UBFD1 yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 74.966 75.07 3 5.5026E-10 86666 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 32.493 27.961 33759000 0 0 0 0 2353700 0 1829700 3206900 0 7532700 0 9424900 0 0 9411500 20425 188 18623 171431;171432;171433;171434;171435;171436 136516;136517 136516 2 GSLRPNGIIVIK Unmodified 1265.782 0.78195573 4180 Q9BV86 NTMT1 N-terminal Xaa-Pro-Lys N-methyltransferase 1;N-terminal Xaa-Pro-Lys N-methyltransferase 1, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 62.428 62.659 3 0.014145 71530 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 41.218 25.678 56025000 0 0 0 0 0 9848400 4215900 0 3247800 5595100 0 9052000 6235000 4507500 13323000 20426 4180 18624 171437;171438;171439;171440;171441;171442;171443;171444 136518;136519;136520;136521;136522;136523 136519 4 GSLSLSPPLNK Unmodified 1111.6237 0.62372375 4438 Q9H7X7 IFT22 Intraflagellar transport protein 22 homolog yes yes 0 0 0 By MS/MS 2 0 2 2 67.605 61.689 2 0.0091871 78827 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.862 53.927 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20427 4438 18625 171445;171446 136524;136525 136524 2 GSLSNAGDPEIVK Unmodified 1285.6514 0.65139506 375 O43847 NRD1 Nardilysin yes yes 0 0 0 By MS/MS 10 0 1 1 42.09 42.833 2 0.028064 46871 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.998 22.209 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20428 375 18626 171447 136526 136526 1 GSLTEGALAHSGNPVSK Unmodified 1623.8216 0.82164829 5054 Q9UPQ0 LIMCH1 LIM and calponin homology domains-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.29 6 1 24 2 3 2 2 2 2 2 2 2 2 2 2 2 2 2 44.714 43.56 2;3 6.1531E-146 57593 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 251.84 210.44 1610700000 394180000 439400000 118360000 36631000 38485000 52388000 48031000 39033000 37301000 48037000 62450000 96163000 55534000 53248000 91437000 20429 5054 18627 171448;171449;171450;171451;171452;171453;171454;171455;171456;171457;171458;171459;171460;171461;171462;171463;171464;171465;171466;171467;171468;171469;171470;171471;171472;171473;171474;171475;171476;171477;171478 136527;136528;136529;136530;136531;136532;136533;136534;136535;136536;136537;136538;136539;136540;136541;136542;136543;136544;136545;136546;136547;136548;136549;136550;136551 136532 13 GSLTFEPLTLVPIQTK Unmodified 1742.9818 0.98183733 4578 Q9NQW7 XPNPEP1 Xaa-Pro aminopeptidase 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 94.359 94.486 2 0.0092843 109495 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.426 32.91 6167000 0 0 0 0 0 0 0 0 0 0 0 0 0 645580 5521400 20430 4578 18628 171479;171480 136552 136552 1 GSLTSEEFAK Unmodified 1067.5135 0.5135046 3168 Q86VN1 VPS36 Vacuolar protein-sorting-associated protein 36 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 44.118 38.767 2 0.00014703 48432 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 146.81 125.51 328390000 54857000 271540000 1992000 0 0 0 0 0 0 0 0 0 0 0 0 20431 3168 18629 171481;171482;171483;171484 136553;136554;136555 136553 2 GSLVAPDRLR Unmodified 1082.6196 0.61964142 1578 P49588 AARS Alanine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.46 39.638 2 0.039173 44303 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 102.62 73.704 143010000 0 0 0 5635800 2528600 11133000 5670200 4944600 5363600 8954400 17987000 16231000 5662800 15136000 43766000 20432 1578 18630 171485;171486;171487;171488;171489;171490;171491;171492;171493;171494;171495;171496 136556 136556 0 GSLVDYLR Unmodified 921.49198 0.4919813 1438 P41240 CSK Tyrosine-protein kinase CSK yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS 10 0 5 1 1 1 1 1 71.731 71.95 2 0.027721 82041 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.177 24.707 11152000 0 0 0 0 0 0 1072300 1450500 0 2321900 2387000 0 0 0 3920300 20433 1438 18631 171497;171498;171499;171500;171501 136557 136557 1 GSLVGLVDYPDDEEEDEEEESSPRK Unmodified 2822.2254 0.22538725 2748 Q5MIZ7 SMEK2 Serine/threonine-protein phosphatase 4 regulatory subunit 3B yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 78.602 72.614 3 3.38E-47 93701 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.552 90.967 31502000 31502000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20434 2748 18632 171502;171503 136558;136559 136559 2 GSLVMEGQK Unmodified 947.47462 0.47461667 36 A8K2U0 A2ML1 Alpha-2-macroglobulin-like protein 1 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 25.096 25.33 2 0.020914 27067 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 52.716 21.427 13751000 0 0 0 8512500 0 0 0 0 0 0 0 0 0 0 5238900 20435 36 18633 171504;171505 136560 136560 1 GSLVSREASDK Unmodified 1147.5833 0.5833155 3483 Q8TBX8 PIP4K2C Phosphatidylinositol 5-phosphate 4-kinase type-2 gamma yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 15.732 12.475 2 4.077E-22 18501 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 189.58 120.63 83186000 62992000 0 20194000 0 0 0 0 0 0 0 0 0 0 0 0 20436 3483 18634 171506;171507 136561;136562;136563;136564;136565 136563 5 GSMISVMSSEGNADTPVSK Unmodified 1895.8605 0.86047792 1125 P21359 NF1 Neurofibromin;Neurofibromin truncated yes yes 0 0 0 By MS/MS 2 0 1 1 71.581 65.854 2 0.00035989 83634 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 54.7 29.908 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20437 1125 18635 171508 136566 136566 1 GSMSDGSYSPDYSLAAVDLK Unmodified 2061.9201 0.92010128 1747 P54750 PDE1A Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A yes yes 0 0 0 By MS/MS 2 0 1 1 83.639 78.919 2 2.928E-09 98104 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.65 106.25 32648000 0 32648000 0 0 0 0 0 0 0 0 0 0 0 0 0 20438 1747 18636 171509 136567 136567 1 GSMYDGLADNYNYGTTSR Oxidation (M) 1999.8218 0.82178422 2346 Q13835 PKP1 Plakophilin-1 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 3 55.669 55.57 2 1.9542E-37 64243 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 125.61 121.44 44312000 0 0 0 10178000 2488200 0 3886400 27760000 0 0 0 0 0 0 0 20439 2346 18637 171510;171511;171512;171513;171514;171515 136568;136569;136570;136571;136572;136573 136572 3816 6 GSMYDGLADNYNYGTTSR Unmodified 1983.8269 0.8268696 2346 Q13835 PKP1 Plakophilin-1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 4 2 2 63.351 63.096 2 4.2756E-26 69137 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 116.84 108.32 23106000 0 0 0 5695700 0 0 0 17410000 0 0 0 0 0 0 0 20440 2346 18637 171516;171517;171518;171519 136574;136575;136576 136574 3 GSNAHEQALETGVTVTGCTVHFVAEDVDAGQIILQEAVPVK Unmodified 4289.1274 0.1274153 1134 P22102 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes yes 0 0 0 By MS/MS 2 0 1 1 98.858 90.728 4 0 116983 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 244.03 236.29 205560000 205560000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20441 1134 18638 171520 136577 136577 1 GSNEEDTDTPLFIGK Unmodified 1621.7471 0.74714594 28 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 67.004 66.266 2 6.3258E-07 75262 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 106.49 99.112 316910000 0 207680000 0 7127900 5202600 11709000 7518200 5172100 0 13589000 11863000 12064000 7909600 8372700 18703000 20442 28 18639 171521;171522;171523;171524;171525;171526;171527;171528;171529;171530;171531;171532;171533;171534 136578;136579;136580;136581;136582;136583;136584;136585;136586;136587;136588;136589;136590;136591 136580 14 GSNEEQVNGSPLER Unmodified 1514.6961 0.69611342 4900 Q9UHF7 TRPS1 Zinc finger transcription factor Trps1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 32.466 32.726 2 0.00043644 34590 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.845 71.155 49147000 0 0 0 0 0 18315000 12081000 0 0 4255000 0 0 5022100 3597600 5876500 20443 4900 18640 171535;171536;171537;171538;171539;171540 136592;136593;136594 136593 3 GSNFAPETGQTAGQFQTR Unmodified 1895.8762 0.87620305 1219 P27540 ARNT Aryl hydrocarbon receptor nuclear translocator yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 51.446 51.515 2 9.7408E-15 57831 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 106.17 84.617 83681000 0 0 0 5529800 5702400 0 8758500 0 7702000 9770100 14481000 0 0 10389000 21349000 20444 1219 18641 171541;171542;171543;171544;171545;171546;171547;171548;171549;171550 136595;136596;136597;136598;136599;136600;136601;136602;136603;136604 136599 10 GSNLDAPEPYR Unmodified 1217.5677 0.56766543 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.935 39.115 2 0.00042462 43158 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 85.764 68.379 236870000 0 0 0 12489000 14907000 17450000 14327000 12011000 15202000 21916000 27330000 25776000 19254000 18655000 37550000 20445 1201 18642 171551;171552;171553;171554;171555;171556;171557;171558;171559;171560;171561;171562 136605;136606;136607;136608;136609;136610;136611;136612;136613;136614;136615;136616 136609 12 GSNLDAPEPYRIGR Unmodified 1543.7743 0.77430417 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 57.34 51.288 3 0.040754 64235 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 26.729 13.325 16532000 13639000 0 2892700 0 0 0 0 0 0 0 0 0 0 0 0 20446 1201 18643 171563;171564 136617;136618 136618 2 GSNMDFREPTEEER Unmodified 1695.7159 0.71586259 2490 Q15056 EIF4H Eukaryotic translation initiation factor 4H yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 1 1 1 1 1 1 2 2 1 2 2 38.153 38.428 2;3 6.6278E-12 42344 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 101.36 89.381 367630000 0 0 0 11187000 11928000 13133000 11762000 15894000 6842100 27475000 51854000 56382000 17067000 50320000 93781000 20447 2490 18644 171565;171566;171567;171568;171569;171570;171571;171572;171573;171574;171575;171576;171577;171578;171579;171580 136619;136620;136621;136622;136623;136624;136625;136626;136627;136628;136629;136630;136631;136632 136627 13 GSNMDFREPTEEER Oxidation (M) 1711.7108 0.71077721 2490 Q15056 EIF4H Eukaryotic translation initiation factor 4H yes yes 0 1 1 By MS/MS By MS/MS 10 0 2 1 1 26.925 27.612 3 0.00053054 28466 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.414 52.866 72110000 0 0 0 0 0 0 0 0 0 0 0 35579000 0 0 36531000 20448 2490 18644 171581;171582 136633;136634 136633 4096 2 GSNNVALGYDEGSIIVK Unmodified 1734.8788 0.87882882 1358 P35606 COPB2 Coatomer subunit beta' yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.206 74.267 2 1.0219E-09 85617 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 86.803 72.568 163050000 0 0 0 4388500 6269000 7463800 7066900 12624000 6523500 17047000 18306000 18592000 11509000 12364000 40898000 20449 1358 18645 171583;171584;171585;171586;171587;171588;171589;171590;171591;171592;171593;171594 136635;136636;136637;136638;136639;136640;136641;136642;136643;136644;136645;136646 136640 12 GSNPHLQTFTFTR Unmodified 1504.7423 0.74227576 4128 Q9BSJ8 ESYT1 Extended synaptotagmin-1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 59.579 59.651 3 0.021535 67503 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 33.787 26.177 89841000 0 0 0 5786100 6841400 9565900 7277000 9475200 7747400 9624500 7252000 0 8189100 8041700 10041000 20450 4128 18646 171595;171596;171597;171598;171599;171600;171601;171602;171603;171604;171605 136647;136648;136649;136650;136651 136647 4 GSNTIASAAADK Unmodified 1104.5411 0.54111633 1754 P55060 CSE1L Exportin-2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.447 19.65 2 2.7292E-05 18932 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 91.313 72.874 287590000 0 0 0 11961000 11843000 51905000 16699000 18167000 0 39939000 27390000 19494000 19026000 24993000 46179000 20451 1754 18647 171606;171607;171608;171609;171610;171611;171612;171613;171614;171615;171616;171617 136652;136653;136654;136655;136656;136657;136658;136659;136660;136661;136662 136659 7 GSNWVPR Unmodified 814.40859 0.40858602 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.024 32.211 2 0.044016 35205 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 66.994 49.227 385860000 0 0 0 24261000 21994000 21630000 26204000 25172000 26738000 29214000 55304000 56594000 32901000 33271000 32576000 20452 2102 18648 171618;171619;171620;171621;171622;171623;171624;171625;171626;171627;171628;171629 136663;136664 136663 2 GSPDEENEEIEDLSDAAFAALHAK Unmodified 2557.1456 0.14562078 3080 Q7Z3B3 KANSL1 KAT8 regulatory NSL complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 97.034 91.73 3 3.378E-08 115590 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.532 70.427 29301000 26553000 0 2747900 0 0 0 0 0 0 0 0 0 0 0 0 20453 3080 18649 171630;171631 136665;136666 136665 2 GSPDGSLQTGKPSAPK Unmodified 1525.7736 0.77363546 3296 Q8IZL8 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 23.477 23.699 3 1.3323E-05 24047 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.746 60.63 150530000 0 0 0 9201500 11847000 7732400 0 9303200 6234200 12790000 10497000 17575000 22531000 19435000 23384000 20454 3296 18650 171632;171633;171634;171635;171636;171637;171638;171639;171640;171641;171642 136667;136668;136669;136670;136671;136672;136673;136674;136675;136676 136669 10 GSPEEELPLPAFEK Unmodified 1541.7613 0.76133944 2738 Q5JTD0 TJAP1 Tight junction-associated protein 1 yes yes 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 82.554 82.604 2 0.029205 95311 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 32.254 18.901 28748000 0 0 0 1984200 4255900 0 1086400 1577500 0 2380500 2485600 3272400 0 3216000 8489900 20455 2738 18651 171643;171644;171645;171646;171647;171648;171649;171650;171651 136677 136677 1 GSPGLLDPCEK Unmodified 1171.5543 0.55432356 3913 Q96KR1 ZFR Zinc finger RNA-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 47.141 46.464 2 0.0029118 52381 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 65.5 56.588 200710000 0 121790000 0 3674700 4543800 6276300 4882700 5939800 0 9500000 7278400 8129200 9707100 8248200 10737000 20456 3913 18652 171652;171653;171654;171655;171656;171657;171658;171659;171660;171661;171662;171663;171664 136678;136679;136680;136681;136682;136683;136684;136685;136686;136687;136688 136685 8 GSPGVPSFAAGPPISEGK Unmodified 1653.8362 0.83623572 2541 Q15517 CDSN Corneodesmosin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 74.31 73.999 2 8.1431E-11 85576 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 95.264 89.658 1629200000 0 39395000 0 254190000 93778000 120640000 73483000 307500000 72901000 107920000 120890000 172920000 141310000 65913000 58324000 20457 2541 18653 171665;171666;171667;171668;171669;171670;171671;171672;171673;171674;171675;171676;171677 136689;136690;136691;136692;136693;136694;136695;136696;136697;136698;136699;136700;136701;136702 136700 14 GSPHPGVGVPTYYNHPEALK Unmodified 2119.0487 0.048688112 2958 Q6PJG2 ELMSAN1 ELM2 and SANT domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.54 3.69 4 9 2 2 1 1 1 1 1 1 1 1 1 58.498 56.765 3;4 0.0026951 63488 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 34.649 25.94 231530000 122830000 0 14304000 5358900 0 10791000 7024100 7452200 7577500 9833700 12117000 12207000 0 0 22040000 20458 2958 18654 171678;171679;171680;171681;171682;171683;171684;171685;171686;171687;171688;171689;171690 136703;136704;136705;136706;136707;136708;136709;136710;136711;136712 136706 9 GSPLAEGPQAFFPER Unmodified 1601.7838 0.78380622 3542 Q8WUF5 PPP1R13L RelA-associated inhibitor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.85 82.914 2 5.8541E-10 95469 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.417 82.841 181980000 0 0 0 5422200 7789200 13271000 9781600 10929000 11763000 18407000 17048000 19249000 18549000 17183000 32584000 20459 3542 18655 171691;171692;171693;171694;171695;171696;171697;171698;171699;171700;171701;171702 136713;136714;136715;136716;136717;136718;136719;136720;136721;136722;136723;136724;136725 136716 13 GSPLLGPVVPGPSPIPSVTEK Unmodified 2027.1303 0.13029248 1575 P49454 CENPF Centromere protein F yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 86.932 87.083 2 4.3352E-06 101025 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 89.231 88.627 27584000 0 0 0 0 0 0 2440200 2178800 2260700 3726100 2980200 3571600 2653400 2353500 5419500 20460 1575 18656 171703;171704;171705;171706;171707;171708;171709;171710;171711 136726;136727;136728;136729;136730;136731;136732;136733;136734 136726 9 GSPLLIGVR Unmodified 910.56 0.56000128 2125;588 Q06210;O94808 GFPT1;GFPT2 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1;Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.334 66.418 2 0.019227 75525 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 54.157 23.932 120230000 0 0 0 5451300 5368500 10376000 7546300 5738300 6838300 8972000 13229000 15371000 10923000 11234000 19179000 20461 2125;588 18657 171712;171713;171714;171715;171716;171717;171718;171719;171720;171721;171722;171723 136735;136736;136737;136738;136739;136740;136741;136742 136742 7 GSPMEISLPIALSK Oxidation (M) 1457.78 0.7799664 896 P09960 LTA4H Leukotriene A-4 hydrolase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.9 3.81 3 1 6 1 2 1 1 1 1 1 1 1 84.871 82.828 2 7.2632E-05 95429 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 83.182 72.95 430310000 9636000 328460000 6722000 5882400 0 0 0 0 0 0 15815000 15594000 0 13192000 35015000 20462 896 18658 171724;171725;171726;171727;171728;171729;171730;171731;171732;171733 136743;136744;136745;136746;136747;136748;136749;136750;136751;136752 136750 1159 10 GSPMEISLPIALSK Unmodified 1441.7851 0.78505177 896 P09960 LTA4H Leukotriene A-4 hydrolase yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 5.57 3.85 3 1 3 1 2 1 1 1 1 91.581 88.968 2 0.0013577 106955 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 83.182 71.135 579440000 12266000 543130000 2744300 0 0 0 0 0 0 0 2700300 0 0 1326200 17269000 20463 896 18658 171734;171735;171736;171737;171738;171739;171740 136753;136754;136755;136756;136757 136755 5 GSPNANEPPLVFVGK Unmodified 1524.7936 0.79364262 1240 P28838 LAP3 Cytosol aminopeptidase yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 1 1 6 1 1 1 1 1 1 1 1 75.952 75.349 2 0.00025456 90236 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 94.363 87.235 112750000 0 59436000 6402000 0 0 0 0 2088800 0 1931800 6527000 8639400 0 7007400 20714000 20464 1240 18659 171741;171742;171743;171744;171745;171746;171747;171748 136758;136759;136760;136761;136762;136763;136764 136760 7 GSPNTASAEATLPR Unmodified 1370.679 0.6790068 2959 Q6PJG6 BRAT1 BRCA1-associated ATM activator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.587 39.766 2 8.5552E-13 44150 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 108.37 78.629 129970000 0 0 0 8612600 5587900 11067000 9222500 10151000 7173100 12261000 14505000 14473000 12108000 11024000 13781000 20465 2959 18660 171749;171750;171751;171752;171753;171754;171755;171756;171757;171758;171759;171760 136765;136766;136767;136768;136769;136770;136771;136772;136773;136774;136775;136776;136777;136778 136766 13 GSPPVPSGPPMEEDGLR Oxidation (M) 1736.8039 0.80394931 4400 Q9H4L4 SENP3 Sentrin-specific protease 3 yes yes 0 1 0 By MS/MS By matching By matching 10 0 3 1 1 1 55.497 55.848 2 0.0025159 63628 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 42.809 29.147 10432000 0 0 0 0 0 0 0 0 0 0 0 0 3272100 2559400 4600600 20466 4400 18661 171761;171762;171763 136779 136779 5862 1 GSPQQIDHAK Unmodified 1079.536 0.53597137 3690 Q92945 KHSRP Far upstream element-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 6.9135 7.0199 2 0.00092512 4452 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 113.26 78.324 212670000 0 0 0 12010000 13054000 17035000 17833000 19629000 18678000 17678000 0 17356000 19675000 18345000 41374000 20467 3690 18662 171764;171765;171766;171767;171768;171769;171770;171771;171772;171773;171774;171775;171776 136780;136781;136782;136783;136784;136785;136786;136787;136788;136789;136790;136791 136784 10 GSPQSAAAELSSGLLASAAASSR Unmodified 2088.0447 0.044724946 2212 Q12948 FOXC1 Forkhead box protein C1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 1 1 1 1 2 2 2 2 2 2 86.292 86.407 2;3 4.1151E-10 100314 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 88.73 83.345 92597000 0 0 0 0 5469000 3276900 2821200 7660300 5508600 14168000 10021000 11416000 5008400 5852900 21395000 20468 2212 18663 171777;171778;171779;171780;171781;171782;171783;171784;171785;171786;171787;171788;171789;171790;171791;171792;171793 136792;136793;136794;136795;136796;136797;136798;136799;136800;136801;136802;136803;136804 136798 12 GSPRPQAPK Unmodified 936.51411 0.51411372 2458 Q14978 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 9.1532 6.1481 2 0.034487 10556 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.523 47.557 187230000 176440000 0 10795000 0 0 0 0 0 0 0 0 0 0 0 0 20469 2458 18664 171794;171795 136805;136806 136805 1 GSPSGGSTAEASDTLSIR Unmodified 1691.7962 0.7962214 4802 Q9P206 KIAA1522 Uncharacterized protein KIAA1522 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 46.997 47.297 2 0.00058942 52841 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 66.533 57.1 24082000 0 0 0 0 0 0 2399500 0 4284800 4713800 4176700 5525200 0 2981900 0 20470 4802 18665 171796;171797;171798;171799;171800;171801 136807;136808;136809;136810 136810 4 GSPSPASVSSGRK Unmodified 1215.6208 0.62076364 919 P10398 ARAF Serine/threonine-protein kinase A-Raf yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 16 1 1 2 1 1 1 1 1 1 3 2 1 11.111 11.254 3 0.00084199 9948 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.804 36.045 135310000 0 0 0 7176500 7424100 13389000 8453400 11319000 7540200 12088000 6570700 13094000 19033000 13798000 15421000 20471 919 18666 171802;171803;171804;171805;171806;171807;171808;171809;171810;171811;171812;171813;171814;171815;171816;171817 136811;136812;136813;136814;136815;136816;136817;136818;136819;136820;136821;136822;136823 136820 11 GSPSSQSIPEK Unmodified 1115.5459 0.54586736 4350 Q9H1H9 KIF13A Kinesin-like protein KIF13A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.628 18.826 2 0.0021805 18644 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 68.893 42.291 63387000 0 0 0 4054500 3899300 6437600 4658200 4137800 5259800 5841800 5154800 7471800 5306100 4330100 6835500 20472 4350 18667 171818;171819;171820;171821;171822;171823;171824;171825;171826;171827;171828;171829 136824;136825;136826;136827;136828;136829;136830;136831;136832 136831 9 GSPTDAEGSPGLSR Unmodified 1329.6161 0.61607219 3519 Q8TER5 ARHGEF40 Rho guanine nucleotide exchange factor 40 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 26.671 27.08 2 0.013435 28829 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 38.021 26.799 6700300 0 0 0 0 0 0 0 0 2527500 0 0 0 0 0 4172800 20473 3519 18668 171830;171831 136833;136834 136834 2 GSPTTGFIEQK Unmodified 1163.5823 0.58225287 3007 Q6ZRV2 FAM83H Protein FAM83H yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 17.255 13.716 2 0.020473 18028 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.815 0 42909000 0 42909000 0 0 0 0 0 0 0 0 0 0 0 0 0 20474 3007 18669 171832;171833 136835 136835 1 GSPVNALQNK Unmodified 1026.5458 0.54580778 3465 Q8NI27 THOC2 THO complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 29.332 28.847 2 0.0023495 30187 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.498 66.65 317260000 0 115740000 0 7948800 16664000 21463000 17736000 4394800 18126000 17006000 22501000 17450000 14982000 16612000 26636000 20475 3465 18670 171834;171835;171836;171837;171838;171839;171840;171841;171842;171843;171844;171845;171846;171847 136836;136837;136838;136839;136840;136841;136842;136843;136844;136845;136846;136847;136848 136840 9 GSPVTTREPTPR Unmodified 1296.6786 0.67861287 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.031 20.204 3 4.0784E-05 20773 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 71.085 63.474 170360000 0 0 0 13354000 13184000 10676000 15990000 16050000 15564000 0 0 29298000 19443000 16097000 20698000 20476 5262 18671 171848;171849;171850;171851;171852;171853;171854;171855;171856;171857;171858;171859 136849;136850;136851;136852;136853;136854;136855;136856;136857;136858 136855 10 GSQAGAEGQPSTVK Unmodified 1315.6368 0.63680763 2726 Q5H9F3 BCORL1 BCL-6 corepressor-like protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 11.352 11.465 2 0.0068084 9240 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 55.401 22.877 13640000 0 0 0 1320600 611460 1121800 1074200 0 1038900 1544100 0 1663300 1497900 1665500 2101900 20477 2726 18672 171860;171861;171862;171863;171864;171865;171866;171867;171868;171869 136859;136860;136861;136862;136863;136864;136865 136864 7 GSQAQPDSPSAQLALIAASQSFLQPGGK Unmodified 2753.3984 0.39842185 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 95.216 95.362 3 4.5972E-31 110864 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 81.341 75.081 21931000 0 0 0 0 0 0 0 837970 0 7005800 3562500 1951300 0 1264800 7309100 20478 5187 18673 171870;171871;171872;171873;171874;171875 136866;136867;136868;136869;136870 136867 5 GSQEGSEGSEGSFR Unmodified 1412.5804 0.58041496 148 O00409 FOXN3 Forkhead box protein N3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 16.211 16.312 2 0.01069 14788 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 50.284 40.596 10456000 0 0 0 0 1249100 2098200 1632800 0 0 0 0 0 0 2951200 2525100 20479 148 18674 171876;171877;171878;171879;171880 136871;136872 136872 2 GSQFGQSCCLRAK Unmodified 1497.6817 0.68166611 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 1 By MS/MS 2 0 1 1 34.21 27.978 3 0.0027949 39287 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.001 50.305 22115000 22115000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20480 848 18675 171881 136873 136873 1 GSQGGNFEGPNK Unmodified 1190.5316 0.53161428 3589 Q8WXF1 PSPC1 Paraspeckle component 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 14.619 14.802 2 2.9148E-05 13647 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.055 82.673 28200000 0 0 0 1078800 1511600 0 1812000 1629000 0 0 3925100 4483100 3782800 0 9977200 20481 3589 18676 171882;171883;171884;171885;171886;171887;171888;171889 136874;136875 136874 2 GSQIISGIVNLEK Unmodified 1356.7613 0.76127986 1106 P20585 MSH3 DNA mismatch repair protein Msh3 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 83.736 79.727 2 0.011567 99370 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.53 48.956 36369000 0 36369000 0 0 0 0 0 0 0 0 0 0 0 0 0 20482 1106 18677 171890;171891 136876 136876 1 GSQITQQSTNQSR Unmodified 1433.6859 0.68588309 1637 P50750 CDK9 Cyclin-dependent kinase 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 10.156 10.293 2 3.9802E-25 7040 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 158.41 149.71 173040000 0 0 0 9013500 9118400 12588000 10331000 7587300 7563800 13118000 20586000 24157000 19965000 15627000 23387000 20483 1637 18678 171892;171893;171894;171895;171896;171897;171898;171899;171900;171901;171902;171903 136877;136878;136879;136880;136881;136882;136883;136884;136885;136886;136887;136888;136889 136883 13 GSQITQQSTNQSRNPATTNQTEFER Unmodified 2822.3179 0.31793969 1637 P50750 CDK9 Cyclin-dependent kinase 9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 38.34 38.556 3 3.9627E-51 41858 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 109.75 97.077 28778000 0 0 0 0 2672400 0 4725700 0 0 4107200 5190500 0 5846600 0 6235900 20484 1637 18679 171904;171905;171906;171907;171908;171909 136890;136891;136892;136893;136894;136895;136896 136893 7 GSQITQQSTNQSRNPATTNQTEFERVF Unmodified 3068.4548 0.45476753 1637 P50750 CDK9 Cyclin-dependent kinase 9 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70.173 69.448 3 1.146E-200 91028 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 209.16 206.84 147480000 60918000 0 12968000 2680300 2683700 6227100 4196700 6417100 5720800 5046300 7137800 11208000 5863400 5582000 10829000 20485 1637 18680 171910;171911;171912;171913;171914;171915;171916;171917;171918;171919;171920;171921;171922;171923 136897;136898;136899;136900;136901;136902;136903;136904;136905;136906;136907;136908 136902 12 GSQQYRALTVPELTQQVFDAK Unmodified 2378.223 0.22302366 842 P07437 TUBB Tubulin beta chain yes yes 0 0 1 By MS/MS 10 0 1 1 84.888 85.067 3 0.01006 98169 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 26.759 18.767 6424300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6424300 20486 842 18681 171924 136909 136909 1 GSQSSDSSSSLSSHR Unmodified 1507.6499 0.64989151 488 O75376 NCOR1 Nuclear receptor corepressor 1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 7.0357 7.1421 3 0.003826 5523 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 41.542 34.086 46595000 0 0 0 2974000 2551700 3702200 2831000 3415400 2873700 5331100 0 4905800 4405300 4440200 9164900 20487 488 18682 171925;171926;171927;171928;171929;171930;171931;171932;171933;171934;171935 136910;136911;136912;136913 136913 3 GSQSYYTVAHAISER Unmodified 1667.7903 0.79034816 1655 P51531 SMARCA2 Probable global transcription activator SNF2L2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 56.854 57.179 3 0.002814 64312 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.408 33.608 39650000 0 0 0 0 0 4832200 0 0 3314500 7333000 4484600 8365200 0 0 11321000 20488 1655 18683 171936;171937;171938;171939;171940;171941 136914;136915;136916;136917 136915 4 GSRDCGLHGQAPK Unmodified 1381.6521 0.65208054 4904 Q9UHL9 GTF2IRD1 General transcription factor II-I repeat domain-containing protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 11.683 7.8097 3 0.042856 12295 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.317 28.082 18292000 18292000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20489 4904 18684 171942 136918 136918 0 GSRGGSGGSYGGGGSGGGYGGGSGSR Unmodified 2090.875 0.87503386 1354 P35527;CON__P35527 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 10.792 10.932 3 2.9157E-51 7207 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 107.75 104.2 + 650160000 0 0 0 79426000 21559000 22271000 12551000 49778000 11836000 24236000 21286000 312100000 54628000 19149000 21342000 20490 1354 18685 171943;171944;171945;171946;171947;171948;171949;171950;171951;171952;171953;171954 136919;136920;136921;136922;136923;136924;136925;136926;136927;136928;136929;136930 136924 12 GSRIEIEAVAIQGPLTTASL Unmodified 2025.1106 0.11061967 1700 P52758 HRSP12 Ribonuclease UK114 yes yes 0 0 1 By MS/MS 2 0 1 1 95.676 87.546 2 0.0015808 113157 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.972 63.354 6714200 6714200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20491 1700 18686 171955 136931 136931 1 GSRIELGDVTPHNIK Unmodified 1634.874 0.87401821 4310 Q9GZZ1 NAA50 N-alpha-acetyltransferase 50 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.4 2.11 3 37 2 1 4 2 4 5 4 4 5 4 5 52.569 52.116 2;3;4 4.5785E-23 59170 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 110.84 100.72 6491600000 272080000 25986000 0 308090000 273070000 555850000 612740000 660210000 721380000 697920000 886310000 1478000000 0 0 0 20492 4310 18687 171956;171957;171958;171959;171960;171961;171962;171963;171964;171965;171966;171967;171968;171969;171970;171971;171972;171973;171974;171975;171976;171977;171978;171979;171980;171981;171982;171983;171984;171985;171986;171987;171988;171989;171990;171991;171992;171993;171994;171995 136932;136933;136934;136935;136936;136937;136938;136939;136940;136941;136942;136943;136944;136945;136946;136947;136948;136949;136950;136951;136952;136953;136954;136955;136956;136957;136958;136959;136960;136961;136962;136963;136964;136965;136966;136967;136968;136969;136970;136971;136972;136973;136974;136975 136973 35 GSRLHPEELGGPPLK Unmodified 1585.8576 0.85763986 2570 Q15742 NAB2 NGFI-A-binding protein 2 yes yes 0 0 1 By MS/MS 2 0 2 2 57.374 49.193 3;4 0.00040373 67080 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.499 48.05 36289000 36289000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20493 2570 18688 171996;171997 136976;136977 136976 2 GSRPIDTSR Unmodified 987.50976 0.50975662 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.0051 7.1287 2 0.011724 5359 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 146.27 92.521 493270000 0 0 0 28009000 36710000 46787000 42878000 57159000 63313000 33229000 55198000 25309000 33013000 29736000 41926000 20494 2102 18689 171998;171999;172000;172001;172002;172003;172004;172005;172006;172007;172008;172009 136978;136979 136979 2 GSRVDIETPNLEGTLTGPR Unmodified 2011.0334 0.033431978 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 74.164 74.28 3 6.6811E-74 85609 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 170.16 158.26 258620000 0 0 0 0 8524000 15175000 9344300 26013000 27371000 29590000 17555000 31032000 22799000 21399000 49813000 20495 2172 18690 172010;172011;172012;172013;172014;172015;172016;172017;172018;172019;172020 136980;136981;136982;136983;136984;136985;136986;136987;136988;136989;136990 136981 11 GSSAAGLTASVMRDPSSR Unmodified 1748.8475 0.84754546 1333 P33992 MCM5 DNA replication licensing factor MCM5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 51.296 51.431 3 0.0001374 56887 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.062 56.583 186100000 0 0 0 7276400 5254500 13191000 6719400 11369000 0 12466000 27436000 24507000 0 17783000 60093000 20496 1333 18691 172021;172022;172023;172024;172025;172026;172027;172028;172029;172030 136991;136992;136993;136994;136995;136996;136997;136998;136999;137000;137001 136995 11 GSSAAGLTASVMRDPSSR Oxidation (M) 1764.8425 0.84246009 1333 P33992 MCM5 DNA replication licensing factor MCM5 yes yes 0 1 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 36.444 36.479 3 0.00092856 40226 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 41.202 31.672 29465000 0 0 0 0 4178600 6666100 0 4616200 4006900 0 0 0 9997000 0 0 20497 1333 18691 172031;172032;172033;172034;172035 137002 137002 2001 1 GSSAGFDRHITIFSPEGR Unmodified 1932.9442 0.94422304 1819 P60900 PSMA6 Proteasome subunit alpha type-6 yes yes 0 0 1 By MS/MS 10 0 2 2 65.796 66.333 3;4 0.0040482 75396 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 25.207 15.626 25443000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25443000 20498 1819 18692 172036;172037 137003;137004 137004 2 GSSAVGLTAYVMK Oxidation (M) 1298.654 0.6540376 1332 P33991 MCM4 DNA replication licensing factor MCM4 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 67.141 60.035 2 0.0024285 77004 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.143 49.759 220230000 48760000 171470000 0 0 0 0 0 0 0 0 0 0 0 0 0 20499 1332 18693 172038;172039 137005;137006 137005 1995 1 GSSAVGLTAYVMK Unmodified 1282.6591 0.65912298 1332 P33991 MCM4 DNA replication licensing factor MCM4 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 5 3.56 2 2 2 2 2 1 1 76.911 73.516 2 2.3993E-05 84116 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.05 73.28 537840000 138650000 374460000 0 4826700 0 0 0 0 0 0 0 0 0 0 19903000 20500 1332 18693 172040;172041;172042;172043;172044;172045 137007;137008;137009 137008 3 GSSDGRGSDSESDLPHR Unmodified 1757.7565 0.75648185 5054 Q9UPQ0 LIMCH1 LIM and calponin homology domains-containing protein 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 14.282 14.601 3 0.003367 13667 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 40.187 36.007 32036000 0 0 0 0 0 0 0 5054800 0 6469200 5007500 5907500 3989500 0 5607300 20501 5054 18694 172046;172047;172048;172049;172050;172051 137010;137011 137010 2 GSSDGRGSDSESDLPHRK Unmodified 1885.8514 0.85144487 5054 Q9UPQ0 LIMCH1 LIM and calponin homology domains-containing protein 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 8.1039 8.3228 4 0.012141 6451 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 30.974 28.671 34410000 0 0 0 0 0 0 0 0 4213300 3960600 16860000 0 5951500 3425100 0 20502 5054 18695 172052;172053;172054;172055;172056 137012;137013 137012 2 GSSDLPFGAVGGTGGSSGPPFK Unmodified 1977.9432 0.94321999 5057 Q9UPS6 SETD1B Histone-lysine N-methyltransferase SETD1B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.539 80.6 2 2.5219E-13 93222 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 103.79 95.88 83189000 0 0 0 2466000 4055400 4069900 4449600 9217200 5013300 7924000 8347000 10743000 8753800 6924500 11225000 20503 5057 18696 172057;172058;172059;172060;172061;172062;172063;172064;172065;172066;172067;172068 137014;137015;137016;137017;137018;137019;137020;137021 137014 8 GSSEQAESDNMDVPPEDDSK Oxidation (M) 2151.8386 0.83861608 2207 Q12906 ILF3 Interleukin enhancer-binding factor 3 yes yes 0 1 0 By MS/MS By MS/MS 1 0 2 1 1 106.1 109.18 2 0 99047 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 275.76 270.48 48985000 19532000 29454000 0 0 0 0 0 0 0 0 0 0 0 0 0 20504 2207 18697 172069;172070 137022;137023 137023 3592 2 GSSEQAESDNMDVPPEDDSK Unmodified 2135.8437 0.84370146 2207 Q12906 ILF3 Interleukin enhancer-binding factor 3 yes yes 0 0 0 By MS/MS 1 0 1 1 106.04 111.31 2 5.3334E-29 91942 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 113.67 105.08 17398000 17398000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20505 2207 18697 172071 137024 137024 1 GSSGDRPEASMTPDAK Unmodified 1604.71 0.71004893 3575 Q8WWL2 SPIRE2 Protein spire homolog 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.943 21.15 3 0.0035448 21481 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 36.029 29.551 86459000 0 0 0 5829600 5117900 5355000 5270600 6769000 5075100 9230900 8182200 11072000 8791000 4762200 11003000 20506 3575 18698 172072;172073;172074;172075;172076;172077;172078;172079;172080;172081;172082;172083 137025;137026;137027;137028;137029;137030;137031;137032;137033;137034 137034 10 GSSGDSDSPGSSSLSLTR Unmodified 1695.7548 0.75475052 2795 Q5TCZ1 SH3PXD2A SH3 and PX domain-containing protein 2A yes yes 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 41.909 42.274 2 0.0031264 46268 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.333 42.897 32432000 0 0 0 0 0 3152000 0 0 2638700 3623600 5640500 4667100 3258600 3633600 5818200 20507 2795 18699 172084;172085;172086;172087;172088;172089;172090;172091 137035 137035 1 GSSGDSDSPGSSSLSLTRK Unmodified 1823.8497 0.84971353 2795 Q5TCZ1 SH3PXD2A SH3 and PX domain-containing protein 2A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 33.117 33.292 3 0.0002148 36513 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 42.529 35.239 68321000 0 0 0 6552000 4391400 0 5996600 7280700 7411800 7412600 0 10531000 6598800 4234100 7912200 20508 2795 18700 172092;172093;172094;172095;172096;172097;172098;172099;172100;172101 137036;137037;137038;137039;137040;137041;137042;137043;137044 137041 8 GSSGGGCFGGSSGGYGGLGGFGGGSFR Unmodified 2341.9771 0.97705609 72 CON__P13645;P13645 KRT10 Keratin, type I cytoskeletal 10 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 78.133 78.192 2;3 9.6378E-107 90276 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 167.82 162.93 + 1699700000 0 0 0 172590000 99850000 142290000 44092000 92877000 53497000 282780000 183800000 188390000 92401000 105520000 241620000 20509 72 18701 172102;172103;172104;172105;172106;172107;172108;172109;172110;172111;172112;172113;172114;172115;172116;172117;172118;172119;172120;172121;172122;172123;172124;172125 137045;137046;137047;137048;137049;137050;137051;137052;137053;137054;137055;137056;137057;137058;137059 137047 13 GSSGGSGAKPSDAASEAAR Unmodified 1661.7605 0.7605046 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 11.192 11.318 3 0.023512 10203 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 23.435 14.153 14768000 0 0 0 2340200 1461100 0 1311200 1202900 0 1245900 0 2062700 1735900 1599200 1808600 20510 2102 18702 172126;172127;172128;172129;172130;172131;172132;172133;172134 137060 137060 1 GSSGGSGAKPSDAASEAARPATSTLNR Unmodified 2502.2059 0.20587005 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 2 2 2 2 2 2 34.715 34.913 3;4 7.4763E-111 37550 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 114.91 107.33 754480000 0 0 0 53157000 34975000 0 83880000 47730000 38606000 69778000 163300000 66381000 96680000 57272000 42720000 20511 2102 18703 172135;172136;172137;172138;172139;172140;172141;172142;172143;172144;172145;172146;172147;172148;172149;172150;172151;172152;172153;172154;172155;172156 137061;137062;137063;137064;137065;137066;137067;137068;137069;137070;137071;137072;137073;137074;137075;137076;137077;137078;137079;137080 137070 19 GSSGGYGSGGAALQPK Unmodified 1392.6634 0.66335673 3528 Q8TF74 WIPF2 WAS/WASL-interacting protein family member 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 33.449 28.066 2 0.017217 39163 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.604 34.646 25997000 4102600 21894000 0 0 0 0 0 0 0 0 0 0 0 0 0 20512 3528 18704 172157;172158 137081;137082 137082 2 GSSGPTQINQVVSHPNQPLTITAHDDR Unmodified 2868.4114 0.41144615 4606 Q9NRL3 STRN4 Striatin-4 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 65.195 65.313 4 1.7669E-14 74043 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 56.468 49.963 65094000 0 0 0 0 3626800 5532600 4506700 5465100 5629900 6876800 8438500 11709000 7139900 6169000 0 20513 4606 18705 172159;172160;172161;172162;172163;172164;172165;172166;172167;172168 137083;137084;137085;137086;137087;137088;137089;137090 137087 8 GSSGSPAHAESYSSGGGGQQK Unmodified 1934.8355 0.83546045 1021 P15408 FOSL2 Fos-related antigen 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 10.16 10.297 3 0.00082041 6543 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 38.377 36.232 41683000 0 0 0 2145800 2744200 2153200 2560100 1814000 2020200 3470900 6012400 5820500 3130300 3318400 6493100 20514 1021 18706 172169;172170;172171;172172;172173;172174;172175;172176;172177;172178;172179;172180 137091;137092;137093 137092 3 GSSGVGLTAAVLR Unmodified 1186.667 0.66698555 1334 P33993 MCM7 DNA replication licensing factor MCM7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 67.769 67.863 2 1.375E-07 77031 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 97.813 79.589 240560000 0 0 0 10051000 9853900 0 13290000 17009000 10266000 27446000 33410000 30593000 19878000 20691000 48071000 20515 1334 18707 172181;172182;172183;172184;172185;172186;172187;172188;172189;172190;172191 137094;137095;137096;137097;137098;137099;137100;137101;137102;137103;137104;137105;137106 137101 12 GSSGVGLTAAVTTDQETGER Unmodified 1934.9181 0.91812745 1183 P25205 MCM3 DNA replication licensing factor MCM3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 54.722 55.034 2 1.9071E-20 61504 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 121.76 109.4 52220000 0 0 0 0 0 4886500 5165500 0 0 4375600 7334100 7674000 0 7348700 15435000 20516 1183 18708 172192;172193;172194;172195;172196;172197;172198 137107;137108;137109;137110;137111;137112;137113 137110 7 GSSHSPDHPGCLMEN Oxidation (M) 1639.6355 0.63550378 622 O95149 SNUPN Snurportin-1 yes yes 0 1 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 20.353 16.94 3 0.00040221 22353 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.275 66.451 40998000 0 36169000 4829500 0 0 0 0 0 0 0 0 0 0 0 0 20517 622 18709 172199;172200;172201 137114;137115;137116 137114 760 3 GSSHSPDHPGCLMEN Unmodified 1623.6406 0.64058916 622 O95149 SNUPN Snurportin-1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 31.36 27.495 3 0.0019913 36499 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.32 53.772 36203000 0 30534000 5668900 0 0 0 0 0 0 0 0 0 0 0 0 20518 622 18709 172202;172203 137117 137117 0 GSSLNIMR Oxidation (M) 892.44365 0.44365089 4481 Q9HA64 FN3KRP Ketosamine-3-kinase yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 24.972 25.47 2 0.029538 25992 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.756 24.783 13148000 0 0 0 0 0 0 0 0 0 0 0 0 0 5751200 7396600 20519 4481 18710 172204;172205 137118 137118 1 GSSLSGTDDGAQEVVK Unmodified 1548.7267 0.72674485 5276 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 36.899 37.127 2 7.168E-06 39987 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.692 61.666 18101000 0 0 0 0 2833600 0 0 0 0 0 0 0 4662800 3189000 7415500 20520 5276 18711 172206;172207;172208;172209 137119;137120;137121 137119 3 GSSLSSESSPVSSPATNHSSPASTPK Unmodified 2485.1569 0.15685417 2434 Q14687 GSE1 Genetic suppressor element 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 38.551 38.792 3 9.9722E-08 43257 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.645 48.117 27252000 0 0 0 0 0 3198300 0 4325800 0 4461700 6949400 0 3638100 4678700 0 20521 2434 18712 172210;172211;172212;172213;172214;172215 137122;137123;137124;137125;137126 137122 5 GSSNFCVK Unmodified 897.40145 0.40145173 377 O43865 AHCYL1 Putative adenosylhomocysteinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.57 3.96 3 4 1 1 1 1 1 1 1 21.602 20.093 2 0.02509 19863 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.981 35.962 560360000 28911000 477620000 3474300 7827700 0 0 0 0 0 0 0 16149000 0 13141000 13241000 20522 377 18713 172216;172217;172218;172219;172220;172221;172222 137127;137128;137129;137130 137127 4 GSSNSYAIK Unmodified 925.45051 0.45051041 1512 P46782 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.22 3.95 3 2 1 12 3 3 1 1 1 1 1 1 1 1 1 1 1 1 31.81 31.907 2 0.0044493 16060 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 86.794 70.64 1770200000 95685000 956610000 0 28994000 42212000 44343000 44618000 30646000 43277000 41041000 58016000 104060000 101070000 78121000 101500000 20523 1512 18714 172223;172224;172225;172226;172227;172228;172229;172230;172231;172232;172233;172234;172235;172236;172237;172238;172239;172240 137131;137132;137133;137134;137135;137136;137137;137138;137139;137140;137141;137142;137143;137144;137145;137146;137147;137148 137147 17 GSSPGPRPVEGTPASR Unmodified 1550.7801 0.78011783 2235 Q13112 CHAF1B Chromatin assembly factor 1 subunit B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.872 22.079 3 2.6365E-06 22464 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 61.127 49.857 169370000 0 0 0 11954000 9744900 13326000 15005000 9313300 14677000 11100000 18318000 24653000 11702000 12108000 17468000 20524 2235 18715 172241;172242;172243;172244;172245;172246;172247;172248;172249;172250;172251;172252 137149;137150;137151;137152;137153;137154;137155;137156;137157;137158;137159;137160;137161 137154 13 GSSPQNTTTPK Unmodified 1116.5411 0.54111633 2646 Q27J81 INF2 Inverted formin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 6.9199 7.0084 2 0.0085147 5260 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 51.445 19.685 24261000 0 0 0 2036200 2718600 0 2731600 3986400 3636100 0 6016400 0 3136100 0 0 20525 2646 18716 172253;172254;172255;172256;172257;172258;172259 137162;137163;137164;137165;137166;137167 137163 6 GSSPSIRPIQGSQGSSSPVEK Unmodified 2084.0498 0.049810324 3624 Q92560 BAP1 Ubiquitin carboxyl-terminal hydrolase BAP1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 39.387 39.742 3 0.00063945 44270 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 40.81 31.627 29483000 0 0 0 0 0 0 3976200 0 3582700 4711900 0 4799200 3745700 2764000 5903400 20526 3624 18717 172260;172261;172262;172263;172264;172265;172266 137168;137169 137168 2 GSSSANPVNSVR Unmodified 1173.5738 0.57381344 4043 Q99661 KIF2C Kinesin-like protein KIF2C yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.635 21.839 2 2.4435E-05 22218 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 92.538 82.951 270600000 0 0 0 13606000 15447000 23724000 19934000 10947000 17084000 21451000 29618000 30579000 28862000 22556000 36794000 20527 4043 18718 172267;172268;172269;172270;172271;172272;172273;172274;172275;172276;172277;172278 137170;137171;137172;137173;137174;137175;137176;137177;137178 137177 7 GSSSGAVDPSVQR Unmodified 1245.5949 0.59494282 2185 Q12772 SREBF2 Sterol regulatory element-binding protein 2;Processed sterol regulatory element-binding protein 2 yes yes 0 0 0 By MS/MS 10 0 1 1 19.604 20.226 2 0.016325 20277 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 39.625 25.418 3167900 0 0 0 0 0 0 0 0 0 0 0 3167900 0 0 0 20528 2185 18719 172279 137179 137179 1 GSSSGGGYSSGSSSYGSGGR Unmodified 1739.6983 0.69829827 79 CON__P35908v2;P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 30 3 3 3 2 4 1 2 2 3 3 2 2 14.99 15.143 2;3 6.0496E-196 14953 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 276.19 262.03 + 5785200000 0 0 0 538770000 345460000 364390000 276190000 629890000 188140000 332020000 891240000 484940000 1109200000 376330000 248600000 20529 79 18720 172280;172281;172282;172283;172284;172285;172286;172287;172288;172289;172290;172291;172292;172293;172294;172295;172296;172297;172298;172299;172300;172301;172302;172303;172304;172305;172306;172307;172308;172309 137180;137181;137182;137183;137184;137185;137186;137187;137188;137189;137190;137191;137192;137193;137194;137195 137181 15 GSSSGGGYSSGSSSYGSGGRQSGSR Unmodified 2254.9435 0.94350735 79 CON__P35908v2;P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 12.191 12.315 3 3.8106E-06 11383 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 43.162 35.802 + 21635000 0 0 0 1389600 930580 4700600 0 0 0 1483400 0 7829800 2717400 1300700 1282900 20530 79 18721 172310;172311;172312;172313;172314;172315;172316;172317 137196;137197;137198;137199;137200 137196 5 GSSSSVCSVASSSDISLGSTK Unmodified 2001.9161 0.91607854 5004 Q9ULT8 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 58.297 58.54 2 0.00033227 66952 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 45.864 33.303 27719000 0 0 0 0 0 3427900 4086300 0 0 3225000 4819100 0 3455400 3296600 5409300 20531 5004 18722 172318;172319;172320;172321;172322;172323;172324 137201;137202;137203;137204;137205;137206 137206 6 GSSYGVTSTESYK Unmodified 1364.6096 0.60958983 2025 P98175 RBM10 RNA-binding protein 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 32.443 32.683 2 0.01613 34651 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.211 39.093 64815000 0 0 0 0 3970700 4502200 4997000 3764900 3871000 5927300 6932600 8331100 7019800 3760200 11738000 20532 2025 18723 172325;172326;172327;172328;172329;172330;172331;172332;172333;172334;172335 137207 137207 1 GSTADAADLR Unmodified 975.46214 0.46213773 3386 Q8NB46 ANKRD52 Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.321 19.516 2 0.012435 20119 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 52.482 30.935 37677000 0 0 0 2407300 1675700 3580500 2055700 1693000 1884800 4370700 3145700 3795100 3531200 3824200 5713000 20533 3386 18724 172336;172337;172338;172339;172340;172341;172342;172343;172344;172345;172346;172347 137208;137209;137210;137211;137212;137213 137209 6 GSTAGEVYR Unmodified 938.44576 0.44575938 488 O75376 NCOR1 Nuclear receptor corepressor 1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 1 2 1 1 2 1 1 14.196 14.361 2 0.0079891 13018 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 70.919 51.356 64299000 0 0 0 3375100 3393100 4154200 4720500 6320700 3439700 8135400 5354200 4281800 8773700 5569400 6780900 20534 488 18725 172348;172349;172350;172351;172352;172353;172354;172355;172356;172357;172358;172359;172360;172361 137214;137215;137216;137217;137218 137217 5 GSTAHFSGFESCSNGVISNK Unmodified 2084.9222 0.92216697 3984 Q96S59 RANBP9 Ran-binding protein 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 61.085 55.398 3 6.8192E-13 71933 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.856 93.824 169900000 120480000 25879000 23544000 0 0 0 0 0 0 0 0 0 0 0 0 20535 3984 18726 172362;172363;172364;172365 137219;137220;137221;137222;137223;137224 137219 6 GSTAPVGGGAFPTIVER Unmodified 1614.8366 0.83657007 2496 Q15084 PDIA6 Protein disulfide-isomerase A6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 75.289 75.315 2 3.3247E-18 86845 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 127.71 111.34 283800000 0 0 0 18297000 17494000 0 32417000 0 18939000 0 49144000 0 26407000 35288000 85811000 20536 2496 18727 172366;172367;172368;172369;172370;172371;172372;172373 137225;137226;137227;137228;137229;137230;137231;137232;137233;137234 137228 10 GSTAPVGGGAFPTIVEREPWDGR Unmodified 2355.1608 0.16075776 2496 Q15084 PDIA6 Protein disulfide-isomerase A6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 81.48 81.616 3 1.5324E-08 94107 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.703 53.078 101150000 0 0 0 0 0 10801000 0 5275200 3496400 8572000 6801100 9236900 3901300 6742000 46320000 20537 2496 18728 172374;172375;172376;172377;172378;172379;172380;172381;172382 137235;137236;137237;137238;137239;137240;137241;137242 137236 8 GSTDNLMDDIER Unmodified 1364.5878 0.58780853 1641 P50990 CCT8 T-complex protein 1 subunit theta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.261 64.352 2 0.0042151 72561 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 76.068 56.282 422740000 0 0 0 18215000 16495000 49828000 21129000 20252000 18282000 35540000 48151000 41220000 23626000 33692000 96309000 20538 1641 18729 172383;172384;172385;172386;172387;172388;172389;172390;172391;172392;172393;172394 137243;137244;137245;137246;137247;137248;137249;137250 137247 5 GSTDNLMDDIER Oxidation (M) 1380.5827 0.58272315 1641 P50990 CCT8 T-complex protein 1 subunit theta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 18 2 2 1 1 2 2 2 2 1 1 2 41.625 41.81 2 0.00069529 46177 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 71.03 59.879 377430000 0 0 0 29213000 20245000 0 18108000 12649000 24473000 46689000 54228000 56851000 25336000 14876000 74766000 20539 1641 18729 172395;172396;172397;172398;172399;172400;172401;172402;172403;172404;172405;172406;172407;172408;172409;172410;172411;172412 137251;137252;137253;137254;137255;137256;137257;137258;137259;137260;137261;137262;137263 137259 2632 13 GSTDNLMDDIERAVDDGVNTFK Unmodified 2411.0911 0.091082791 1641 P50990 CCT8 T-complex protein 1 subunit theta yes yes 0 0 1 By MS/MS 2 0 1 1 100 91.873 3 0.00723 118288 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 19.897 11.078 40015000 40015000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20540 1641 18730 172413 137264 137264 1 GSTEGSESYEEDPYLVVNPNYLLED Unmodified 2818.2345 0.23449537 2415 Q14566 MCM6 DNA replication licensing factor MCM6 yes yes 0 0 0 By MS/MS By MS/MS 1 0 2 1 1 104.5 107.58 3 1.4488E-37 97079 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 108.37 96.979 133710000 60419000 73293000 0 0 0 0 0 0 0 0 0 0 0 0 0 20541 2415 18731 172414;172415 137265;137266 137266 2 GSTESCNTTTEDEDLK Unmodified 1785.7211 0.72106713 2315 Q13555 CAMK2G Calcium/calmodulin-dependent protein kinase type II subunit gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 21.751 21.99 2 2.134E-27 22458 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 160.52 153.83 74347000 0 0 0 0 4635700 7034300 5858700 4241500 5351000 6988000 8868000 8546000 8914300 5142900 8766500 20542 2315 18732 172416;172417;172418;172419;172420;172421;172422;172423;172424;172425;172426 137267;137268;137269;137270;137271;137272;137273;137274;137275;137276;137277;137278 137273 12 GSTGFGQDSILSLPGNVGHQDVK Unmodified 2312.1397 0.13968796 987 P13798 APEH Acylamino-acid-releasing enzyme yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 79.365 79.545 3 0.0033601 92060 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 27.928 23.9 62644000 0 0 0 0 0 0 0 6741100 0 0 6687000 8300700 0 5853000 35062000 20543 987 18733 172427;172428;172429;172430;172431 137279 137279 1 GSTHPQPGVSPPAAPAAPGPK Unmodified 1919.9854 0.98535957 606 O94925 GLS Glutaminase kidney isoform, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 49.372 43.23 3 2.3256E-07 56626 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 48.354 41.464 42725000 14915000 27811000 0 0 0 0 0 0 0 0 0 0 0 0 0 20544 606 18734 172432;172433;172434 137280;137281;137282;137283 137281 3 GSTLDLSDLEAEK Unmodified 1376.6671 0.66710471 182 O00767 SCD Acyl-CoA desaturase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 72.471 72.157 2 6.4584E-18 88731 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.23 102.15 429100000 0 142230000 0 13214000 18885000 21557000 20579000 45114000 16976000 23125000 22234000 30961000 24908000 21935000 27380000 20545 182 18735 172435;172436;172437;172438;172439;172440;172441;172442;172443;172444;172445;172446;172447 137284;137285;137286;137287;137288;137289;137290;137291;137292;137293;137294 137287 11 GSTLDNSLHK Unmodified 1070.5356 0.53563702 4258 Q9BZ29 DOCK9 Dedicator of cytokinesis protein 9 yes yes 0 0 0 By MS/MS 2 0 1 1 21.081 17.367 2 6.2251E-06 22877 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.38 95.751 18298000 0 18298000 0 0 0 0 0 0 0 0 0 0 0 0 0 20546 4258 18736 172448 137295 137295 1 GSTLEEVYGSVAK Unmodified 1338.6667 0.66671078 2142 Q07864 POLE DNA polymerase epsilon catalytic subunit A yes yes 0 0 0 By MS/MS 2 0 1 1 73.864 68.709 2 0.0021272 86253 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.522 80.85 105430000 0 105430000 0 0 0 0 0 0 0 0 0 0 0 0 0 20547 2142 18737 172449 137296 137296 1 GSTMEEELENITTK Oxidation (M) 1596.7189 0.71888228 1522 P47712 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.7 1.43 1 22 1 2 2 2 2 1 2 2 2 2 2 2 1 53.261 53.376 2 8.581E-23 60623 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 149.31 115.42 656750000 0 0 0 38844000 40460000 64122000 58003000 17325000 48470000 64945000 66449000 97183000 66440000 49306000 45207000 20548 1522 18738 172450;172451;172452;172453;172454;172455;172456;172457;172458;172459;172460;172461;172462;172463;172464;172465;172466;172467;172468;172469;172470;172471;172472 137297;137298;137299;137300;137301;137302;137303;137304;137305;137306;137307;137308;137309;137310;137311;137312;137313;137314;137315;137316;137317;137318;137319;137320;137321;137322 137307 2419 26 GSTMEEELENITTK Unmodified 1580.724 0.72396766 1522 P47712 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 76.76 76.232 2 2.7299E-29 94236 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 135.66 120.09 408140000 0 93547000 0 10434000 14655000 21646000 13800000 34227000 18213000 32868000 31935000 33051000 21559000 27775000 54434000 20549 1522 18738 172473;172474;172475;172476;172477;172478;172479;172480;172481;172482;172483;172484;172485;172486 137323;137324;137325;137326;137327;137328;137329;137330;137331;137332;137333;137334;137335;137336 137326 14 GSTPYKGDDEGIFISR Unmodified 1740.8319 0.83187862 2381 Q14160 SCRIB Protein scribble homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 56.815 56.986 3 0.035379 64758 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 33.697 21.905 31576000 0 0 0 0 0 0 8591200 11048000 0 0 0 0 4716900 7220200 0 20550 2381 18739 172487;172488;172489;172490 137337 137337 0 GSTPYSQDSAYSSSTTSTSFKPR Unmodified 2441.0983 0.098276659 245 O15047 SETD1A Histone-lysine N-methyltransferase SETD1A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.517 47.679 3 2.8393E-55 53744 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 117.64 110.87 97525000 0 0 0 6462200 4681900 4134400 7102400 8127300 5086000 10716000 11853000 11128000 10014000 6915600 11303000 20551 245 18740 172491;172492;172493;172494;172495;172496;172497;172498;172499;172500;172501;172502 137338;137339;137340;137341;137342;137343;137344;137345;137346;137347;137348;137349;137350 137347 13 GSTSSSPYVAASHTPPINGSDSILGTR Unmodified 2658.2885 0.28853705 4004 Q99081 TCF12 Transcription factor 12 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 72.657 72.747 3 1.3111E-10 83265 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.66 43.319 43659000 0 0 0 0 3051800 6972000 0 0 3585000 6706800 5016800 0 3986200 4630900 9709100 20552 4004 18741 172503;172504;172505;172506;172507;172508;172509;172510 137351;137352;137353;137354 137352 3 GSTTRVNSTANAETQATSAFQTQK Unmodified 2498.1997 0.19972204 820 P06400 RB1 Retinoblastoma-associated protein yes yes 0 0 1 By MS/MS 2 0 1 1 51.864 43.903 3 6.2483E-19 60485 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.153 80.263 22813000 22813000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20553 820 18742 172511 137355;137356 137355 2 GSTVAREASDK Unmodified 1119.552 0.55201537 1537;1978 P48426;P78356 PIP4K2A;PIP4K2B Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha;Phosphatidylinositol 5-phosphate 4-kinase type-2 beta no no 0 0 1 By MS/MS 2 0 1 1 5.9605 3.743 2 0.030485 5441 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 99.343 57.467 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20554 1537;1978 18743 172512 137357 137357 1 GSTYSPTSPGYSPTSPTYSLTSPAISPDDSDEEN Unmodified 3506.5009 0.5008934 1179 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 0 0 0 By MS/MS 1 0 1 1 100.76 106.02 3 1.9353E-07 85573 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 46.464 45.873 5905000 5905000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20555 1179 18744 172513 137358 137358 1 GSVAEAEDCYNTALR Unmodified 1654.7257 0.72569899 271 O15294 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 51.356 51.528 2 4.211E-42 57283 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 164.04 144.28 125830000 0 0 0 0 6211000 9712600 9406700 10401000 11199000 9864000 14830000 0 15286000 17162000 21758000 20556 271 18745 172514;172515;172516;172517;172518;172519;172520;172521;172522;172523 137359;137360;137361;137362;137363;137364;137365;137366;137367;137368;137369;137370;137371 137369 13 GSVAVLSAEQNHK Unmodified 1338.6892 0.68917755 2434 Q14687 GSE1 Genetic suppressor element 1 yes yes 0 0 0 By matching By MS/MS By MS/MS 2.33 0.471 2 1 1 1 1 35.239 30.48 2;3 0.0085238 38477 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 77.662 65.815 34145000 17129000 9893500 7122400 0 0 0 0 0 0 0 0 0 0 0 0 20557 2434 18746 172524;172525;172526 137372;137373 137373 1 GSVEAASNAHLLQSK Unmodified 1510.774 0.77396981 3657 Q92766 RREB1 Ras-responsive element-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.04 3.41 6 1 21 2 3 2 2 2 2 2 2 2 2 1 1 2 2 1 38.301 37.102 2;3 2.0717E-21 39477 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 117.93 79.846 489070000 49184000 123040000 32185000 21252000 23884000 25817000 25765000 26400000 22283000 35506000 9402400 10021000 46176000 23244000 14915000 20558 3657 18747 172527;172528;172529;172530;172531;172532;172533;172534;172535;172536;172537;172538;172539;172540;172541;172542;172543;172544;172545;172546;172547;172548;172549;172550;172551;172552;172553;172554 137374;137375;137376;137377;137378;137379;137380;137381;137382;137383;137384;137385;137386;137387;137388;137389;137390;137391;137392;137393;137394;137395;137396;137397;137398;137399 137382 21 GSVEEDILER Unmodified 1145.5564 0.55643205 199 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 56.813 57.06 2 0.0070493 63904 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 61.65 24.89 44725000 0 0 0 0 0 6497800 6629200 0 4620000 0 8454400 10461000 0 8062200 0 20559 199 18748 172555;172556;172557;172558;172559;172560;172561 137400;137401;137402;137403;137404;137405;137406 137405 7 GSVEEDILERAK Unmodified 1344.6885 0.68850885 199 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 68.657 62.757 3 0.035705 80060 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 39.424 23.287 23946000 0 23946000 0 0 0 0 0 0 0 0 0 0 0 0 0 20560 199 18749 172562 137407 137407 1 GSVISPTELEAPILVPHTAQR Unmodified 2214.2008 0.20083166 3310 Q8N1B4 VPS52 Vacuolar protein sorting-associated protein 52 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 84.414 84.52 3 0.00056502 97754 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.257 32.969 135140000 0 0 0 0 7266400 12161000 6554300 13346000 12727000 18331000 14492000 17795000 6725700 6210300 19528000 20561 3310 18750 172563;172564;172565;172566;172567;172568;172569;172570;172571;172572;172573 137408;137409;137410;137411 137408 4 GSVLEPEGTVEIK Unmodified 1356.7137 0.71366097 2231 Q13085 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.346 62.443 2 1.3447E-06 71288 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 112.13 72.507 123060000 0 0 0 3842400 2749200 7495700 5181600 5781900 5331900 11400000 15017000 16177000 11961000 13918000 24209000 20562 2231 18751 172574;172575;172576;172577;172578;172579;172580;172581;172582;172583;172584;172585 137412;137413;137414;137415;137416;137417;137418;137419 137413 8 GSVLIPGLVEGSTK Unmodified 1355.766 0.76603089 3184 Q86WJ1 CHD1L Chromodomain-helicase-DNA-binding protein 1-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 79.642 79.164 2 3.4318E-05 90571 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 85.288 50.756 296440000 0 217570000 2810000 3226900 0 6021800 5742800 5613900 5708900 5896700 7863400 8577500 6683700 8105100 12620000 20563 3184 18752 172586;172587;172588;172589;172590;172591;172592;172593;172594;172595;172596;172597;172598 137420;137421;137422;137423;137424;137425;137426;137427;137428;137429;137430;137431 137428 9 GSVLPNSDK Unmodified 915.46616 0.46616048 1136 P22307 SCP2 Non-specific lipid-transfer protein yes yes 0 0 0 By MS/MS 2 0 1 1 22.52 18.637 2 0.017714 24524 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.516 43.692 31327000 0 31327000 0 0 0 0 0 0 0 0 0 0 0 0 0 20564 1136 18753 172599 137432 137432 1 GSVPLSSSPPATHFPDETEITNPVPK Unmodified 2703.3392 0.33917563 946 P11388 TOP2A DNA topoisomerase 2-alpha yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 81.199 77.181 3 3.9692E-19 96124 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.573 66.363 52991000 0 52991000 0 0 0 0 0 0 0 0 0 0 0 0 0 20565 946 18754 172600;172601 137433;137434;137435 137433 3 GSVSDCSDGTSELEEPLGEDPR Unmodified 2334.9758 0.97577826 1628 P50548 ERF ETS domain-containing transcription factor ERF yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 1 2 2 1 2 2 2 1 1 2 2 62.112 62.254 2;3 3.0816E-66 71402 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 121.31 116.13 195730000 0 0 0 6779200 11498000 14929000 15513000 10747000 10628000 24754000 19119000 21132000 12334000 18812000 29487000 20566 1628 18755 172602;172603;172604;172605;172606;172607;172608;172609;172610;172611;172612;172613;172614;172615;172616;172617;172618;172619;172620 137436;137437;137438;137439;137440;137441;137442;137443;137444;137445;137446;137447;137448 137445 13 GSVSNAQQPDLSK Unmodified 1329.6525 0.6524577 775 P04150 NR3C1 Glucocorticoid receptor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.957 23.163 2 8.256E-13 22891 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 164.33 146.47 504750000 0 0 0 27257000 30143000 29618000 38567000 34523000 24527000 41522000 39794000 73341000 60517000 51715000 53223000 20567 775 18756 172621;172622;172623;172624;172625;172626;172627;172628;172629;172630;172631;172632 137449;137450;137451;137452;137453;137454;137455;137456;137457;137458;137459 137455 10 GSVSQPSTPSPPKPTGIFQTSANSSFEPVK Unmodified 3058.5247 0.52474457 242 O15027 SEC16A Protein transport protein Sec16A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 77.361 77.477 3 4.787E-61 89475 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 100.41 90.078 103490000 0 0 0 0 6895600 0 6046700 8999200 6092500 15552000 11506000 13741000 9804800 10902000 13950000 20568 242 18757 172633;172634;172635;172636;172637;172638;172639;172640;172641;172642 137460;137461;137462;137463;137464;137465;137466;137467;137468;137469;137470;137471;137472;137473 137460 14 GSVSSVSPKPPSSFK Unmodified 1489.7777 0.77765821 4769 Q9NZJ0 DTL Denticleless protein homolog yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 41.861 42.05 3 0.00089951 45888 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.234 42.442 79234000 0 0 0 4490800 5744800 9061800 0 0 5735300 9627000 10498000 12464000 8749600 4122600 8739700 20569 4769 18758 172643;172644;172645;172646;172647;172648;172649;172650;172651;172652 137474 137474 1 GSVTLSEIR Unmodified 960.52401 0.52400971 4577 Q9NQW6 ANLN Actin-binding protein anillin yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 46.354 46.506 2 0.012192 51180 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.679 25.284 24589000 0 0 0 0 2379600 3637800 2375500 0 0 0 0 0 4735900 4633500 6826700 20570 4577 18759 172653;172654;172655;172656;172657;172658 137475;137476 137475 2 GSVTLSEIRLPLK Unmodified 1411.8399 0.83986454 4577 Q9NQW6 ANLN Actin-binding protein anillin yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.11 80.168 3 0.004839 92632 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 46.069 39.03 57860000 0 0 0 1068700 1458300 6540500 2503500 4313100 4092100 5755000 4925500 5002700 3275800 4157300 14767000 20571 4577 18760 172659;172660;172661;172662;172663;172664;172665;172666;172667;172668;172669;172670 137477;137478;137479 137477 3 GSVVNVNPTNTRPQSDTPEIRK Unmodified 2408.2408 0.24079899 695 O95819 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 yes yes 0 0 2 By MS/MS 2 0 1 1 54.65 46.542 4 0.00039342 63958 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.483 46.85 23509000 23509000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20572 695 18761 172671 137480 137480 0 GSYGDLGGPIITTQVTIPK Unmodified 1916.0255 0.025493054 1868 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.68 1.57 1 24 1 2 2 2 2 2 2 2 2 2 2 2 2 84.454 84.323 2;3 2.2163E-73 97339 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 168.67 137.03 2979700000 0 27484000 0 28344000 130740000 262210000 142580000 164520000 165050000 514210000 292550000 319700000 92596000 209390000 630340000 20573 1868 18762 172672;172673;172674;172675;172676;172677;172678;172679;172680;172681;172682;172683;172684;172685;172686;172687;172688;172689;172690;172691;172692;172693;172694;172695;172696 137481;137482;137483;137484;137485;137486;137487;137488;137489;137490;137491;137492;137493;137494;137495;137496;137497;137498;137499;137500;137501;137502;137503;137504 137488 19 GSYGLDLEAVR Unmodified 1178.5932 0.5931519 276 O15357 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 70.474 70.671 2 0.0016512 81326 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 71.349 33.793 49431000 0 0 0 0 0 10013000 0 0 0 12157000 11490000 0 0 0 15771000 20574 276 18763 172697;172698;172699;172700 137505;137506 137506 2 GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYR Unmodified 3311.3008 0.30084566 780 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 32 2 4 2 2 4 2 3 2 4 3 2 2 34.377 34.556 3;4 0 37358 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 263.33 201.68 + 7047500000 0 0 0 386550000 245790000 408710000 211820000 2376200000 172920000 400240000 645230000 436510000 1134400000 287750000 341360000 20575 780 18764 172701;172702;172703;172704;172705;172706;172707;172708;172709;172710;172711;172712;172713;172714;172715;172716;172717;172718;172719;172720;172721;172722;172723;172724;172725;172726;172727;172728;172729;172730;172731;172732 137507;137508;137509;137510;137511;137512;137513;137514;137515;137516;137517;137518;137519;137520;137521;137522;137523;137524;137525;137526;137527;137528;137529;137530;137531;137532;137533;137534;137535;137536;137537;137538 137521 31 GSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYRGGSGGGGGGSSGGR Unmodified 4298.7127 0.71267915 780 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 3 2 1 6 1 1 2 1 2 1 30.281 30.393 3;4 0 31652 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 200.7 200.7 + 956470000 0 0 0 8117600 12234000 38420000 15612000 496560000 37931000 75787000 89358000 0 55987000 27848000 98614000 20576 780 18765 172733;172734;172735;172736;172737;172738;172739;172740;172741;172742;172743;172744;172745;172746;172747;172748;172749;172750;172751;172752;172753 137539;137540;137541;137542;137543;137544;137545;137546;137547;137548;137549;137550;137551;137552;137553;137554;137555;137556;137557;137558 137540 16 GSYNPVTHIYTAQDVK Unmodified 1791.8792 0.87916317 832 P06865 HEXA Beta-hexosaminidase subunit alpha yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 65.217 58.433 2;3 0.00057407 78314 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.09 40.462 87746000 79473000 0 8273500 0 0 0 0 0 0 0 0 0 0 0 0 20577 832 18766 172754;172755;172756 137559;137560;137561;137562 137559 4 GSYNRAPQQQPPPQQPPPPQPPPQQPPPPPSYSPAR Unmodified 3904.9398 0.93975337 4162 Q9BUJ2 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 61.841 62.003 4 0.019832 71135 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 19.03 14.837 9928100 0 0 0 0 0 0 0 0 0 4259200 0 0 5668900 0 0 20578 4162 18767 172757;172758 137563 137563 0 GSYSLSHVYTPNDVR Unmodified 1693.806 0.80599822 845 P07686 HEXB Beta-hexosaminidase subunit beta;Beta-hexosaminidase subunit beta chain B;Beta-hexosaminidase subunit beta chain A yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 55.74 55.869 3 0.043496 63345 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 25.965 21.497 55047000 0 0 0 9005000 3070300 3871200 0 6280700 2536200 3450500 4818800 7849200 3918700 3178300 7067900 20579 845 18768 172759;172760;172761;172762;172763;172764;172765;172766;172767;172768;172769 137564;137565 137564 2 GSYVSIHSSGFR Unmodified 1295.6258 0.62584901 2347;118 O00148;Q13838 DDX39A;DDX39B ATP-dependent RNA helicase DDX39A;Spliceosome RNA helicase DDX39B no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 1 1 2 1 1 1 1 2 2 1 2 43.381 43.63 2;3 0.0033046 47649 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.754 27.912 312910000 0 0 0 8619300 6060600 40987000 14743000 12239000 14385000 22816000 24450000 37325000 24234000 19731000 87323000 20580 118;2347 18769 172770;172771;172772;172773;172774;172775;172776;172777;172778;172779;172780;172781;172782;172783;172784;172785 137566;137567;137568;137569;137570;137571 137567 4 GSYWAIDTNPK Unmodified 1250.5932 0.5931519 5062 Q9UPW0 FOXJ3 Forkhead box protein J3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 60.768 61.172 2 0.0080158 69077 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.579 40.353 16806000 0 0 0 0 0 0 0 0 2737300 0 4792100 4216400 0 0 5060600 20581 5062 18770 172786;172787;172788;172789;172790 137572;137573;137574;137575;137576 137573 5 GTAAILEYLR Unmodified 1105.6132 0.61315906 4468 Q9H9A6 LRRC40 Leucine-rich repeat-containing protein 40 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.938 83.002 2 0.0015063 95894 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 90.64 61.742 107050000 0 0 0 2551000 5354700 11990000 5326100 7273600 5493200 10821000 10454000 9560200 9102600 7007300 22120000 20582 4468 18771 172791;172792;172793;172794;172795;172796;172797;172798;172799;172800;172801;172802 137577;137578;137579;137580;137581;137582;137583;137584;137585;137586;137587 137578 11 GTAETDQLAPIVPLNPGDLTFLGGEDGQK Unmodified 2952.4716 0.47164637 3709 Q93074 MED12 Mediator of RNA polymerase II transcription subunit 12 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 98.583 94.561 3 1.352E-47 116573 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.304 79.728 39925000 0 39925000 0 0 0 0 0 0 0 0 0 0 0 0 0 20583 3709 18772 172803;172804 137588;137589;137590 137588 3 GTAFGGWK Unmodified 822.40244 0.40243801 955 P11766 ADH5 Alcohol dehydrogenase class-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 51.295 45.387 2 0.019461 62678 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.866 56.198 579020000 448970000 67167000 62882000 0 0 0 0 0 0 0 0 0 0 0 0 20584 955 18773 172805;172806;172807 137591;137592;137593;137594 137592 4 GTAGAIQEGSITR Unmodified 1259.647 0.64697839 488 O75376 NCOR1 Nuclear receptor corepressor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.515 33.699 2 1.6627E-19 36604 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 152.7 133.6 200810000 0 0 0 9439800 12195000 15305000 17605000 14804000 11472000 19642000 22428000 22883000 18593000 13728000 22719000 20585 488 18774 172808;172809;172810;172811;172812;172813;172814;172815;172816;172817;172818;172819 137595;137596;137597;137598;137599;137600;137601;137602;137603;137604;137605;137606;137607 137601 13 GTAGLSQNSTLEVQTLSVAPK Unmodified 2100.1063 0.10626257 3954 Q96QA5 GSDMA Gasdermin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 2 2 1 1 2 1 2 2 2 2 1 76.711 76.731 2;3 1.4692E-61 88656 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 169.04 134.66 150270000 0 0 0 22179000 11194000 4697700 3481400 10915000 3110000 31838000 26028000 22976000 9546200 4302100 0 20586 3954 18775 172820;172821;172822;172823;172824;172825;172826;172827;172828;172829;172830;172831;172832;172833;172834;172835;172836;172837 137608;137609;137610;137611;137612;137613;137614;137615;137616;137617;137618;137619;137620;137621 137618 14 GTAHEMPK Unmodified 869.40654 0.40653711 247 O15066 KIF3B Kinesin-like protein KIF3B;Kinesin-like protein KIF3B, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 6.8774 4.1471 2 0.012119 6418 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.6 75.492 35318000 0 22189000 13128000 0 0 0 0 0 0 0 0 0 0 0 0 20587 247 18776 172838;172839 137622 137622 1 GTALGSVPGGSITK Unmodified 1243.6772 0.67721588 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 50.077 50.378 2 0.0010634 56715 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 71.555 56.69 178120000 0 0 0 0 14527000 0 0 24952000 0 0 33798000 26233000 27971000 0 50640000 20588 5262 18777 172840;172841;172842;172843;172844;172845;172846;172847 137623;137624;137625;137626;137627;137628;137629;137630 137625 8 GTALVLAR Unmodified 799.49159 0.49158736 5238 Q9Y5L0 TNPO3 Transportin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 42.464 42.715 2 0.016392 48099 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 67.344 25.842 93673000 0 0 0 0 7285700 10324000 7294500 6699700 0 8572900 10867000 9419200 7720400 9137400 16352000 20589 5238 18778 172848;172849;172850;172851;172852;172853;172854;172855;172856;172857 137631;137632;137633 137631 3 GTANARMPEK Unmodified 1073.5288 0.52877751 2015 P84098 RPL19 60S ribosomal protein L19 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 12.197 9.0727 2 3.8925E-10 13786 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 163.91 117.52 192350000 172620000 0 19726000 0 0 0 0 0 0 0 0 0 0 0 0 20590 2015 18779 172858;172859 137634;137635;137636 137634 2 GTAPSDNRVTSFR Unmodified 1406.6902 0.69024019 5046 Q9UNZ2 NSFL1C NSFL1 cofactor p47 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 29.397 29.684 3 0.0019569 31685 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 48.532 33.501 57570000 0 0 0 0 1825600 0 4480500 0 3364000 0 9284600 10430000 6872300 9277000 12036000 20591 5046 18780 172860;172861;172862;172863;172864;172865;172866;172867 137637;137638;137639 137638 3 GTASADVSTDTRK Unmodified 1307.6317 0.63172225 3680 Q92889 ERCC4 DNA repair endonuclease XPF yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 8.6315 8.7736 3 4.7875E-05 6081 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 71.933 58.344 44932000 0 0 0 3510600 3008200 663100 0 2049800 0 3890000 12569000 6211800 4152400 3770700 5106400 20592 3680 18781 172868;172869;172870;172871;172872;172873;172874;172875;172876;172877 137640;137641;137642;137643 137640 3 GTASRVLK Unmodified 830.4974 0.49740102 1246 P29372 MPG DNA-3-methyladenine glycosylase yes yes 0 0 1 By MS/MS 2 0 1 1 12.308 8.3663 2 0.034866 13127 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.12 26.367 28660000 28660000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20593 1246 18782 172878 137644 137644 0 GTATPELHTATDYRDGPDGNSNEPDTRPLEDR Unmodified 3496.5727 0.57271041 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 0 2 By MS/MS By MS/MS 10 0 2 1 1 52.028 52.471 4 0.0054877 58469 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 20.592 14.873 17647000 0 0 0 0 0 0 0 0 0 0 0 0 0 5433300 12214000 20594 2193 18783 172879;172880 137645;137646 137646 2 GTAVVNGEFK Unmodified 1020.524 0.52400971 1265 P30048 PRDX3 Thioredoxin-dependent peroxide reductase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 38.877 33.869 2 3.9878E-06 44145 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 146.81 119.29 855770000 20286000 830510000 4972500 0 0 0 0 0 0 0 0 0 0 0 0 20595 1265 18784 172881;172882;172883 137647;137648;137649;137650;137651;137652;137653 137648 7 GTAVVPFR Unmodified 845.47594 0.4759373 485 O75362 ZNF217 Zinc finger protein 217 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 48.055 48.638 2 0.043141 54849 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 49.358 28.499 11272000 0 0 0 0 0 0 0 0 0 0 5053500 0 0 0 6218100 20596 485 18785 172884;172885 137654 137654 1 GTAYTFFTPGNLK Unmodified 1415.7085 0.70851601 3670 Q92841 DDX17 Probable ATP-dependent RNA helicase DDX17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 81.112 80.461 2 2.4986E-25 93177 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 160.75 144.5 767810000 0 76608000 5668000 20010000 28361000 50206000 40969000 42098000 47695000 68871000 58039000 83649000 61600000 69603000 114430000 20597 3670 18786 172886;172887;172888;172889;172890;172891;172892;172893;172894;172895;172896;172897;172898;172899;172900 137655;137656;137657;137658;137659;137660;137661;137662;137663;137664;137665;137666;137667;137668;137669;137670;137671;137672 137665 18 GTAYVVYEDIFDAK Unmodified 1589.7613 0.76133944 5151 Q9Y3B4 SF3B6 Splicing factor 3B subunit 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 86.841 86.964 2 0.0019503 100845 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 64.55 55.821 9258100 0 0 0 0 0 0 0 0 0 3012700 0 0 0 1217200 5028200 20598 5151 18787 172901;172902;172903 137673 137673 1 GTCVEGTIPK Unmodified 1060.5223 0.52229515 3702 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 32.38 32.478 2 0.0084468 35819 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 60.019 42.654 51516000 0 0 0 4527200 5680000 5673500 4691800 6771000 3825100 6086100 5194000 9067400 0 0 0 20599 3702 18788 172904;172905;172906;172907;172908;172909;172910;172911;172912 137674;137675;137676 137676 3 GTDDSMTLQSQK Oxidation (M) 1325.5769 0.57690949 151 O00422 SAP18 Histone deacetylase complex subunit SAP18 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.793 11.969 2 2.6093E-08 11019 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 123.63 103.86 53138000 0 0 0 0 4029200 3525400 4494900 3871500 4699400 4660800 2728000 9055900 6630600 4693900 4748700 20600 151 18789 172913;172914;172915;172916;172917;172918;172919;172920;172921;172922;172923 137677;137678;137679;137680;137681;137682;137683;137684;137685;137686 137684 210 10 GTDDSMTLQSQK Unmodified 1309.582 0.58199487 151 O00422 SAP18 Histone deacetylase complex subunit SAP18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 24.847 24.36 2 1.6273E-08 26510 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 128.03 97.78 93245000 4981800 0 0 0 11649000 0 6618700 0 6691000 0 12879000 0 17445000 11817000 21164000 20601 151 18789 172924;172925;172926;172927;172928;172929;172930;172931;172932;172933;172934;172935;172936 137687;137688;137689;137690;137691;137692;137693;137694;137695;137696;137697;137698;137699 137687 13 GTDLQGELFK Unmodified 1106.5608 0.56078914 1296 P31152 MAPK4 Mitogen-activated protein kinase 4 yes yes 0 0 0 By MS/MS 2 0 1 1 69.964 64.095 2 0.00012191 81620 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.15 92.901 11554000 0 11554000 0 0 0 0 0 0 0 0 0 0 0 0 0 20602 1296 18790 172937 137700 137700 1 GTDLWLGVDALGLNIYEK Unmodified 1976.0255 0.025493054 1017 P15311 EZR Ezrin yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 100.74 95.281 2 6.1693E-10 117787 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 133.16 124.85 51244000 44332000 6911200 0 0 0 0 0 0 0 0 0 0 0 0 0 20603 1017 18791 172938;172939;172940 137701;137702;137703 137701 3 GTDMAFLK Unmodified 881.43169 0.43168922 4608 Q9NRN9 METTL5 Methyltransferase-like protein 5 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 61.672 56.343 2 0.01219 71994 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.2 56.44 64860000 0 64860000 0 0 0 0 0 0 0 0 0 0 0 0 0 20604 4608 18792 172941;172942 137704 137704 1 GTDPQVIDMSVK Unmodified 1288.6333 0.63330216 3970 Q96RL7 VPS13A Vacuolar protein sorting-associated protein 13A yes yes 0 0 0 By MS/MS 10 0 1 1 57.656 57.827 2 0.016007 65866 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 57.347 41.466 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20605 3970 18793 172943 137705 137705 1 GTDRLDLPVTTR Unmodified 1342.7205 0.72047768 3693 Q92974 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 2 2 53.005 53.302 3 1.8432E-05 60990 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 74.15 59.154 195530000 0 0 0 0 0 20174000 0 64297000 31222000 46776000 0 33057000 0 0 0 20606 3693 18794 172944;172945;172946;172947;172948;172949;172950 137706;137707;137708;137709;137710;137711;137712;137713;137714;137715 137713 9 GTDSQAMEEEKPEGHV Oxidation (M) 1758.7367 0.73665761 2294 Q13451 FKBP5 Peptidyl-prolyl cis-trans isomerase FKBP5;Peptidyl-prolyl cis-trans isomerase FKBP5, N-terminally processed yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.33 3.77 4 8 2 2 1 1 1 1 1 1 1 1 18.526 17.204 2;3 0.00036526 22118 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.022 68.429 247900000 18231000 202230000 0 3656100 1566000 0 0 2341700 1505300 2940900 0 0 3520300 4257800 7648200 20607 2294 18795 172951;172952;172953;172954;172955;172956;172957;172958;172959;172960;172961;172962 137716;137717;137718 137716 3754 3 GTDSQAMEEEKPEGHV Unmodified 1742.7417 0.74174299 2294 Q13451 FKBP5 Peptidyl-prolyl cis-trans isomerase FKBP5;Peptidyl-prolyl cis-trans isomerase FKBP5, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS 2.4 0.49 3 2 1 4 32.042 27.278 2;3 8.7441E-31 34168 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 132.32 131.48 387930000 12052000 375880000 0 0 0 0 0 0 0 0 0 0 0 0 0 20608 2294 18795 172963;172964;172965;172966;172967 137719;137720;137721;137722;137723 137721 5 GTDTVAGLALIK Unmodified 1157.6656 0.66558856 1481 P43490 NAMPT Nicotinamide phosphoribosyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By matching 7.11 3.8 6 1 12 1 4 2 1 1 1 1 1 1 1 1 1 1 1 1 78.286 76.707 1;2;3 3.151E-12 95775 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.63 88.05 1381600000 33414000 1077600000 45334000 8299900 8371500 12738000 14121000 12999000 8788900 18456000 27838000 23876000 13573000 22281000 53977000 20609 1481 18796 172968;172969;172970;172971;172972;172973;172974;172975;172976;172977;172978;172979;172980;172981;172982;172983;172984;172985;172986 137724;137725;137726;137727;137728;137729;137730;137731;137732;137733 137727 8 GTDVASFVK Unmodified 922.476 0.47599688 1688 P52564 MAP2K6 Dual specificity mitogen-activated protein kinase kinase 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6 4 4 4 1 2 1 1 1 1 1 54.153 48.233 1;2 0.0010747 62727 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.27 87.205 759390000 14378000 737680000 7331800 0 0 0 0 0 0 0 0 0 0 0 0 20610 1688 18797 172987;172988;172989;172990;172991;172992;172993;172994 137734;137735;137736;137737;137738;137739;137740 137736 7 GTDVNVFNTILTTR Unmodified 1549.81 0.81002097 773 P04083 ANXA1 Annexin A1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 87.235 87.304 2 1.1896E-07 101352 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 92.19 75.936 88704000 0 0 0 1704700 1376800 3427000 7216100 14991000 2052600 4594100 8651300 10256000 4049100 4431600 25954000 20611 773 18798 172995;172996;172997;172998;172999;173000;173001;173002;173003;173004;173005;173006 137741;137742;137743;137744;137745;137746;137747;137748;137749;137750;137751 137749 11 GTDYQLSK Unmodified 910.43961 0.43961137 1740 P54577 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 7.91 3.42 2 1 8 2 1 1 1 1 1 1 1 1 1 20.785 19.96 2 0.0062529 25070 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.88 47.708 458290000 0 334440000 3136200 0 4851700 0 8120200 7620700 11461000 12202000 18834000 0 0 19606000 38027000 20612 1740 18799 173007;173008;173009;173010;173011;173012;173013;173014;173015;173016;173017 137752;137753;137754;137755;137756;137757;137758;137759;137760;137761;137762 137756 11 GTEAGQVGEPGIPTGEAGPSCSSASDK Unmodified 2545.1238 0.12383948 275 O15355 PPM1G Protein phosphatase 1G yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 52.465 52.559 3 1.5637E-30 59405 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 78.481 71.607 176480000 0 0 0 11456000 5104800 24173000 9258500 8664900 6933500 13710000 25237000 0 16172000 19074000 36694000 20613 275 18800 173018;173019;173020;173021;173022;173023;173024;173025;173026;173027;173028 137763;137764;137765;137766;137767;137768;137769;137770;137771;137772;137773;137774;137775;137776 137768 13 GTEAPAVVTEEEDDDEETAPPVIAPRPDHTK Unmodified 3314.5426 0.54263906 2248 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.74 2.92 3 16 2 1 2 1 2 1 1 1 2 1 2 1 1 1 67.922 66.912 3;4 2.0521E-15 82676 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 69.016 68.513 661940000 432720000 0 44247000 12384000 1935400 25606000 8078600 3654100 11353000 27112000 18933000 35981000 14593000 14680000 10666000 20614 2248 18801 173029;173030;173031;173032;173033;173034;173035;173036;173037;173038;173039;173040;173041;173042;173043;173044;173045;173046;173047 137777;137778;137779;137780;137781;137782;137783;137784;137785;137786;137787 137782 10 GTEASSGTEAATGLEGEEK Unmodified 1822.8068 0.80684567 3277 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 34.819 35.03 2 1.1904E-109 38174 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 190.03 179.85 67610000 0 0 0 6269900 4664000 0 9263000 4381800 0 0 7468700 7909300 11331000 6775000 9547200 20615 3277 18802 173048;173049;173050;173051;173052;173053;173054;173055;173056;173057 137788;137789;137790;137791;137792;137793;137794;137795;137796;137797 137795 10 GTEDELDK Unmodified 905.39781 0.39780614 831;884 P06753;P09493 TPM3;TPM1 Tropomyosin alpha-3 chain;Tropomyosin alpha-1 chain no no 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 11.371 11.381 2 0.025168 10268 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 58.917 7.13 3324600 0 0 0 1205600 0 0 0 2119000 0 0 0 0 0 0 0 20616 831;884 18803 173058;173059 137798 137798 1 GTEDEVEK Unmodified 905.39781 0.39780614 90;853 CON__Q3SX28;P07951 TPM2 Tropomyosin beta chain no no 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 7.1442 4.0607 2 0.018953 6018 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.754 16.459 + 141870000 65750000 72570000 3551100 0 0 0 0 0 0 0 0 0 0 0 0 20617 90;853 18804 173060;173061;173062;173063 137799;137800 137799 2 GTEDITSPHGIPLDLLDR Unmodified 1947.9902 0.99017018 5086 Q9Y265 RUVBL1 RuvB-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 1 1 2 1 2 2 84.632 84.744 2;3 1.6898E-15 97815 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.544 87.261 272520000 0 0 0 0 8650400 25676000 9504000 19209000 14506000 28419000 19314000 23861000 10441000 15526000 97416000 20618 5086 18805 173064;173065;173066;173067;173068;173069;173070;173071;173072;173073;173074;173075;173076;173077 137801;137802;137803;137804;137805;137806;137807;137808;137809;137810;137811;137812;137813;137814;137815;137816;137817;137818;137819 137805 18 GTEEGPGTSHTEGR Unmodified 1413.612 0.61204944 2738 Q5JTD0 TJAP1 Tight junction-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 6.6365 6.7506 3 2.9725E-06 4151 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.45 69.358 62513000 0 0 0 3307900 3788900 3396400 6648300 0 4094100 6617900 7715100 7830300 0 6023800 13090000 20619 2738 18806 173078;173079;173080;173081;173082;173083;173084;173085;173086;173087 137820;137821;137822;137823;137824;137825;137826;137827;137828;137829 137823 9 GTEELYAIK Unmodified 1022.5284 0.52842638 1051 P17252 PRKCA Protein kinase C alpha type yes yes 0 0 0 By MS/MS 10 0 1 1 49.096 49.532 2 0.043067 55582 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 43.769 20.75 244450000 0 0 0 0 0 0 0 0 0 0 244450000 0 0 0 0 20620 1051 18807 173088 137830 137830 1 GTEFFLK Unmodified 840.43815 0.43815481 3966 Q96RE7 NACC1 Nucleus accumbens-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 61.913 61.978 2 0.030762 70865 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 74.439 31.72 172520000 0 0 0 9117000 9396700 17848000 10678000 12749000 9651400 19331000 21653000 0 15899000 15230000 30969000 20621 3966 18808 173089;173090;173091;173092;173093;173094;173095;173096;173097;173098;173099 137831;137832;137833;137834;137835;137836;137837 137836 7 GTEGAAGTGAQTLPMETPLVVK Unmodified 2127.0882 0.088169665 3236 Q8IW75 SERPINA12 Serpin A12 yes yes 0 0 0 By MS/MS 10 0 1 1 79.928 80.118 2 0.0001001 92562 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 58.752 53.473 3707500 0 0 0 0 0 0 0 3707500 0 0 0 0 0 0 0 20622 3236 18809 173100 137838 137838 1 GTEGHQGPLTCVAANQDGSLILTGSVDCQAK Unmodified 3183.4925 0.49247494 2341 Q13685 AAMP Angio-associated migratory cell protein yes yes 0 0 0 By MS/MS 2 0 1 1 80.063 77.489 3 0.047115 94127 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 14.817 12.679 4208900 0 0 4208900 0 0 0 0 0 0 0 0 0 0 0 0 20623 2341 18810 173101 137839 137839 1 GTEGLSSCGNRNEETGTK Unmodified 1895.8279 0.82793223 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.947 14.109 3 3.0709E-06 13033 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 56.851 53.19 52272000 0 0 0 3259800 2457000 3502300 3712000 2622100 2302100 4063400 4391200 4863500 3984400 7115700 9998000 20624 2193 18811 173102;173103;173104;173105;173106;173107;173108;173109;173110;173111;173112;173113 137840;137841;137842;137843;137844;137845;137846;137847 137842 8 GTEGWESAATQTK Unmodified 1364.6208 0.62082322 5055 Q9UPQ9 TNRC6B Trinucleotide repeat-containing gene 6B protein yes yes 0 0 0 By MS/MS 2 0 1 1 40.306 35.253 2 0.0047058 45927 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.882 70.745 11375000 0 11375000 0 0 0 0 0 0 0 0 0 0 0 0 0 20625 5055 18812 173114 137848 137848 1 GTEIKPGQNNPVPVSETNESSIVER Unmodified 2680.3304 0.33040186 1181 P25054 APC Adenomatous polyposis coli protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 2 1 1 1 1 1 1 1 1 59.628 59.791 3 8.232E-06 68207 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 41.087 38.154 48330000 0 0 0 3596800 0 3338800 6960800 3860300 0 5196300 6441200 8533600 0 2666700 7735900 20626 1181 18813 173115;173116;173117;173118;173119;173120;173121;173122;173123;173124 137849;137850;137851;137852;137853;137854;137855;137856;137857;137858;137859 137857 11 GTEISSGAASK Unmodified 1006.4931 0.49310351 4516 Q9HCJ3 RAVER2 Ribonucleoprotein PTB-binding 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 9.264 9.4224 2 0.0010376 7278 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.509 11.244 73883000 0 0 0 0 4335400 5171200 6883200 8810400 4587100 5056100 11249000 10617000 6525800 4117000 6531500 20627 4516 18814 173125;173126;173127;173128;173129;173130;173131;173132;173133;173134;173135 137860;137861;137862;137863;137864;137865;137866;137867;137868 137863 8 GTEITHAVVIK Unmodified 1166.6659 0.66592292 4033 Q99613;B5ME19 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.1 3.37 6 1 22 2 3 2 2 1 2 2 2 2 2 2 1 2 2 2 43.062 41.833 2;3 1.0616E-16 46228 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 162.88 101.97 1264000000 146330000 267490000 327890000 24113000 5852200 43348000 25386000 28392000 28106000 60211000 54926000 31913000 64344000 46317000 109430000 20628 4033 18815 173136;173137;173138;173139;173140;173141;173142;173143;173144;173145;173146;173147;173148;173149;173150;173151;173152;173153;173154;173155;173156;173157;173158;173159;173160;173161;173162;173163;173164 137869;137870;137871;137872;137873;137874;137875;137876;137877;137878;137879;137880;137881;137882;137883;137884 137883 5 GTELDDGIQADSGPINDTDANPR Unmodified 2370.0571 0.057140126 1762 P55210 CASP7 Caspase-7;Caspase-7 subunit p20;Caspase-7 subunit p11 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 62.601 62.88 3 0.030542 71949 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 19.538 14.781 10478000 0 0 0 0 0 4608600 0 0 0 0 0 0 0 0 5869400 20629 1762 18816 173165;173166 137885 137885 1 GTELWLGVDALGLNIYEHDDK Unmodified 2357.1539 0.15394104 1345 P35241 RDX Radixin yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 97.967 92.146 2;3 1.02E-239 116575 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 280.87 228.99 34205000 34205000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20630 1345 18817 173167;173168 137886;137887 137887 2 GTENEDAGSDYQSDNQASWIHR Unmodified 2479.0272 0.027236981 1522 P47712 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 2 1 1 1 1 1 1 48.329 48.49 3 4.7028E-280 54793 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 234.04 226.51 608270000 0 0 0 31295000 28232000 59564000 32651000 54307000 32588000 49573000 62865000 70273000 60464000 41851000 84613000 20631 1522 18818 173169;173170;173171;173172;173173;173174;173175;173176;173177;173178;173179;173180;173181 137888;137889;137890;137891;137892;137893;137894;137895;137896;137897;137898;137899;137900;137901;137902;137903 137898 16 GTENREVGIGGDQGPHDK Unmodified 1864.8664 0.86636665 1536 P48382 RFX5 DNA-binding protein RFX5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.479 18.671 3 1.0121E-11 19282 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 111.09 101.52 247810000 0 0 0 15971000 18015000 17172000 18805000 19344000 27213000 19534000 22654000 29478000 23243000 12940000 23438000 20632 1536 18819 173182;173183;173184;173185;173186;173187;173188;173189;173190;173191;173192;173193 137904;137905;137906;137907;137908;137909;137910;137911;137912;137913 137906 8 GTEPIVVDPFDPR Unmodified 1440.7249 0.72489436 1143 P22681 CBL E3 ubiquitin-protein ligase CBL yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 82.107 82.132 2 0.010243 94502 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.419 26.787 209410000 0 0 0 11631000 0 0 0 0 0 0 50624000 0 0 45854000 101300000 20633 1143 18820 173194;173195;173196;173197 137914;137915;137916;137917 137914 4 GTESHLSELNTK Unmodified 1314.6416 0.64155866 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 6.8 3.92 4 6 2 2 2 1 1 2 26.211 24.807 2;3 0.0011177 33087 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.58 73.618 86668000 0 56444000 7536200 0 6912200 0 0 1553200 0 1785900 0 0 0 0 12437000 20634 2291 18821 173198;173199;173200;173201;173202;173203;173204;173205;173206;173207 137918;137919;137920;137921 137919 4 GTESVTEEK Unmodified 978.45057 0.45056999 1449 P42226 STAT6 Signal transducer and activator of transcription 6 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 7.6571 7.6634 2 0.030755 5850 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 48.036 20.202 5531400 0 0 0 0 761270 2182000 991260 1596800 0 0 0 0 0 0 0 20635 1449 18822 173208;173209;173210;173211 137922 137922 1 GTEVQVDDIK Unmodified 1102.5506 0.55061839 5077 Q9Y230 RUVBL2 RuvB-like 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.29 3.67 4 2 11 3 2 1 1 1 1 1 1 1 1 1 1 1 1 39.201 37.428 2 5.9226E-06 49692 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 128.12 57.596 1127800000 68744000 133380000 4969100 48619000 57232000 73285000 0 80820000 52373000 79266000 85667000 99876000 115090000 96382000 132120000 20636 5077 18823 173212;173213;173214;173215;173216;173217;173218;173219;173220;173221;173222;173223;173224;173225;173226;173227;173228 137923;137924;137925;137926;137927;137928;137929;137930;137931;137932;137933;137934;137935;137936 137929 13 GTEVQVDDIKR Unmodified 1258.6517 0.65172941 5077 Q9Y230 RUVBL2 RuvB-like 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 2 2 2 30.989 31.344 2;3 0.0024391 33606 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 45.915 30.376 79424000 0 0 0 0 5251600 6590300 6472400 0 0 0 5672400 31631000 0 9837600 13969000 20637 5077 18824 173229;173230;173231;173232;173233;173234;173235;173236;173237;173238 137937;137938;137939;137940;137941;137942 137941 5 GTEWVDPEDPTVIAENELLGAAAAIEAAAK Unmodified 3050.5084 0.50842581 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS 2 0 1 1 102.9 100.52 3 0.00062159 121342 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 32.675 29.947 10179000 0 0 10179000 0 0 0 0 0 0 0 0 0 0 0 0 20638 5187 18825 173239 137943 137943 1 GTEWVDPEDPTVIAETELLGAAASIEAAAK Unmodified 3053.5081 0.50809145 5201 Q9Y4G6 TLN2 Talin-2 yes yes 0 0 0 By MS/MS 2 0 1 1 103.71 98.98 3 3.8372E-08 122226 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 46.783 40.688 14029000 0 14029000 0 0 0 0 0 0 0 0 0 0 0 0 0 20639 5201 18826 173240 137944 137944 1 GTFDAISLNPDNAIEK Unmodified 1703.8366 0.83662965 2731 Q5JPI9 METTL10 Protein-lysine N-methyltransferase METTL10 yes yes 0 0 0 By MS/MS 3 0 1 1 82.194 78.921 2 1.1098E-10 94608 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 110.38 92.906 10084000 0 10084000 0 0 0 0 0 0 0 0 0 0 0 0 0 20640 2731 18827 173241 137945 137945 1 GTFDNAETK Unmodified 981.44034 0.44033966 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 14.062 14.324 2 0.0077155 12969 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.692 36.8 24063000 0 0 0 0 0 0 1573200 1405400 1760800 3218600 3097900 4251300 0 3087800 5667700 20641 2392 18828 173242;173243;173244;173245;173246;173247;173248;173249 137946;137947 137946 2 GTFHWSGNEQMTK Oxidation (M) 1537.662 0.66197652 4772 Q9NZL9 MAT2B Methionine adenosyltransferase 2 subunit beta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 40.251 35.159 3 1.2963E-10 48369 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 116.81 109.35 346880000 276240000 37453000 33194000 0 0 0 0 0 0 0 0 0 0 0 0 20642 4772 18829 173250;173251;173252 137948;137949;137950 137949 6140 3 GTFHWSGNEQMTK Unmodified 1521.6671 0.6670619 4772 Q9NZL9 MAT2B Methionine adenosyltransferase 2 subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.6 3.67 3 7 1 1 1 1 1 1 1 1 2 47.148 45.682 2;3 0.00086403 61463 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.736 70.457 406640000 275040000 57609000 22745000 0 0 2464400 0 3847000 0 0 7106800 6349500 0 5918500 25560000 20643 4772 18829 173253;173254;173255;173256;173257;173258;173259;173260;173261;173262 137951;137952;137953;137954;137955;137956 137951 6 GTFPDAREQEIR Unmodified 1417.695 0.69499121 2508 Q15233 NONO Non-POU domain-containing octamer-binding protein yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.982 39.162 3 0.0039677 43150 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 43.991 30.312 246610000 0 0 0 15157000 13357000 14329000 25225000 14173000 20555000 22854000 24648000 25184000 20997000 19315000 30813000 20644 2508 18830 173263;173264;173265;173266;173267;173268;173269;173270;173271;173272;173273;173274 137957;137958;137959 137959 3 GTFQIVYK Unmodified 954.51747 0.51746776 4726 Q9NXG2 THUMPD1 THUMP domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.12 3.89 3 1 4 1 2 1 1 1 1 1 61.099 58.413 2 0.033696 64961 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.554 29.582 306910000 169290000 98261000 6977300 0 0 4998000 0 0 0 0 6675400 0 0 7594700 13118000 20645 4726 18831 173275;173276;173277;173278;173279;173280;173281;173282 137960;137961;137962;137963;137964;137965;137966 137961 7 GTFTDDLHK Unmodified 1032.4876 0.4876242 4393;5174 Q9H4A3;Q9Y3S1 WNK1;WNK2 Serine/threonine-protein kinase WNK1;Serine/threonine-protein kinase WNK2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 30.368 30.575 2 0.009185 31830 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.464 32.533 207640000 0 0 0 5647800 12705000 0 16135000 14416000 15261000 13775000 20845000 22797000 22936000 22916000 40204000 20646 4393;5174 18832 173283;173284;173285;173286;173287;173288;173289;173290;173291;173292;173293 137967;137968;137969;137970;137971;137972;137973;137974 137969 8 GTFVDYQTTVVK Unmodified 1356.6925 0.6925316 5201 Q9Y4G6 TLN2 Talin-2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 62.109 62.116 2 0.021571 70990 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 39.917 26.325 13262000 0 0 0 1788000 0 3303400 0 0 0 3751500 0 0 0 0 4419600 20647 5201 18833 173294;173295;173296;173297 137975;137976 137975 2 GTGAASFDEFGNSK Unmodified 1386.6052 0.60517315 2034 Q00403 GTF2B Transcription initiation factor IIB yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 50.519 49.834 2 5.1213E-173 63571 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 251.43 244.05 651690000 0 280580000 0 28793000 34001000 0 30451000 31502000 25601000 32892000 43945000 43879000 34535000 25640000 39877000 20648 2034 18834 173298;173299;173300;173301;173302;173303;173304;173305;173306;173307;173308;173309;173310;173311 137977;137978;137979;137980;137981;137982;137983;137984;137985;137986;137987;137988;137989 137979 13 GTGANGSFK Unmodified 837.39808 0.39808091 3612 Q92522 H1FX Histone H1x yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 8.9445 5.5014 2 0.030571 7888 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.351 22.579 27976000 3273800 24702000 0 0 0 0 0 0 0 0 0 0 0 0 0 20649 3612 18835 173312;173313 137990 137990 1 GTGARPYTGK Unmodified 1006.5196 0.51959303 1578 P49588 AARS Alanine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 7.6996 4.6618 2 5.8055E-05 6713 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 140.05 100.05 963730000 796570000 77207000 89952000 0 0 0 0 0 0 0 0 0 0 0 0 20650 1578 18836 173314;173315;173316 137991;137992;137993;137994 137994 4 GTGASGSFK Unmodified 810.38718 0.38718187 1038;920;1037 P16401;P10412;P16402;P22492;Q02539;P16403 HIST1H1B;HIST1H1E;HIST1H1D;HIST1H1T;HIST1H1A;HIST1H1C Histone H1.5;Histone H1.4;Histone H1.3;Histone H1t;Histone H1.1;Histone H1.2 no no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 7.5229 7.5859 2 0.031872 5663 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 47.574 24.645 12984000 0 0 0 0 1411400 2836600 2446600 2764000 2324900 1200800 0 0 0 0 0 20651 1037;920;1038 18837 173317;173318;173319;173320;173321;173322 137995 137995 1 GTGDSLRESK Unmodified 1048.5149 0.51490158 2115 Q05519 SRSF11 Serine/arginine-rich splicing factor 11 yes yes 0 0 1 By matching By matching By MS/MS 2 0 3 1 1 1 7.5794 4.5875 2 0.0099384 6688 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 96.143 59.383 45188000 8915600 27240000 9032300 0 0 0 0 0 0 0 0 0 0 0 0 20652 2115 18838 173323;173324;173325 137996 137996 0 GTGEAEEEYVGPR Unmodified 1392.6157 0.61573784 2354 Q13895 BYSL Bystin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.636 34.819 2 2.5639E-13 38458 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 172.88 160.82 163620000 0 0 0 10296000 8355200 15790000 9318500 9108400 8081100 14196000 18656000 18632000 16783000 13950000 20458000 20653 2354 18839 173326;173327;173328;173329;173330;173331;173332;173333;173334;173335;173336;173337 137997;137998;137999;138000;138001;138002;138003;138004;138005;138006;138007;138008 137997 12 GTGFGTGSTASGWDVEQALTK Unmodified 2068.9702 0.97016302 4584 Q9NR09 BIRC6 Baculoviral IAP repeat-containing protein 6 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 84.825 80.812 2 1.635E-58 100495 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 169.09 141.99 95173000 0 95173000 0 0 0 0 0 0 0 0 0 0 0 0 0 20654 4584 18840 173338;173339 138009;138010 138009 2 GTGGASAEGGPTGLAHGR Unmodified 1551.739 0.73898129 3833 Q96F45 ZNF503 Zinc finger protein 503 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 22.454 22.693 3 0.0016678 22629 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 29.444 15.48 80393000 0 0 0 0 3911600 4302800 5263100 7385000 5901000 7749400 11137000 11375000 8711200 8908900 5747800 20655 3833 18841 173340;173341;173342;173343;173344;173345;173346;173347;173348;173349;173350 138011;138012;138013;138014;138015;138016;138017;138018 138016 7 GTGIVSAPVPK Unmodified 1024.5917 0.59169534 1027 P15880 RPS2 40S ribosomal protein S2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.034 47.2 2 0.00042521 53391 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 85.744 50.387 2276800000 0 0 0 128520000 152580000 146330000 124690000 141310000 98120000 201050000 209700000 312270000 287360000 201630000 273210000 20656 1027 18842 173351;173352;173353;173354;173355;173356;173357;173358;173359;173360;173361;173362 138019;138020;138021;138022;138023;138024;138025;138026;138027;138028;138029;138030 138019 9 GTGLDEAMEWLVETLK Unmodified 1790.8761 0.87605162 1416 P40616 ARL1 ADP-ribosylation factor-like protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 104.03 95.9 2 0.00017581 123135 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 91.858 85.754 59691000 59691000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20657 1416 18843 173363 138031 138031 1 GTGLQPGEEELPDIAPPLVTPDEPK Unmodified 2598.3065 0.30647852 1488 P45974 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 1 2 2 2 2 2 2 2 2 2 2 2 88.459 88.548 2;3 2.7355E-12 102837 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 56.303 53.338 327110000 0 0 0 3009900 9516900 27224000 10465000 13415000 13282000 43300000 36133000 34983000 14123000 24640000 97013000 20658 1488 18844 173364;173365;173366;173367;173368;173369;173370;173371;173372;173373;173374;173375;173376;173377;173378;173379;173380;173381;173382;173383;173384;173385;173386 138032;138033;138034;138035;138036;138037;138038;138039;138040;138041;138042;138043;138044;138045;138046;138047;138048 138040 14 GTGMQIR Oxidation (M) 777.38032 0.38032236 1303 P31689 DNAJA1 DnaJ homolog subfamily A member 1 yes yes 0 1 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 6.1045 6.261 2 0.039942 3982 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 54.525 29.527 41903000 0 0 0 0 0 3554200 3145300 2226000 2273200 5900000 5611400 7208100 4833600 0 7151400 20659 1303 18845 173387;173388;173389;173390;173391;173392;173393;173394;173395 138049;138050;138051 138049 3 GTGNTSTDGSYKPSFLTDQELK Unmodified 2345.1023 0.1022994 1219 P27540 ARNT Aryl hydrocarbon receptor nuclear translocator yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 67.246 67.325 3 9.7218E-08 77244 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 57.989 49.599 42538000 0 0 0 2861600 2568500 0 4543700 4062300 0 4113500 4687100 5797100 0 5155700 8748400 20660 1219 18846 173396;173397;173398;173399;173400;173401;173402;173403;173404;173405 138052;138053;138054;138055;138056;138057;138058;138059;138060 138053 9 GTGREQQIVIQSSGGLSK Unmodified 1843.9752 0.97518882 1399 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 3.6 3.2 4 1 2 1 1 1 48.87 44.64 3 1.3655E-08 48538 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.55 64.505 371820000 299180000 20316000 24705000 0 0 0 0 0 0 0 0 0 0 0 27615000 20661 1399 18847 173406;173407;173408;173409;173410 138061;138062;138063;138064;138065;138066;138067;138068;138069 138062 8 GTGRIPDQLVILDMK Oxidation (M) 1670.9025 0.90254115 1595 P49755 TMED10 Transmembrane emp24 domain-containing protein 10 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75.942 75.224 3 0.00025103 86734 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 62.165 43.332 221800000 30493000 0 6001400 10389000 8685200 13507000 15761000 16236000 13344000 17211000 15218000 26446000 11982000 12147000 24377000 20662 1595 18848 173411;173412;173413;173414;173415;173416;173417;173418;173419;173420;173421;173422;173423;173424 138070;138071;138072;138073;138074;138075;138076;138077;138078;138079;138080;138081;138082;138083;138084;138085;138086 138083 2563 16 GTGRIPDQLVILDMK Unmodified 1654.9076 0.90762652 1595 P49755 TMED10 Transmembrane emp24 domain-containing protein 10 yes yes 0 0 1 By MS/MS 2 0 1 1 88.762 80.632 3 0.0088391 104848 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.14 33.869 14855000 14855000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20663 1595 18848 173425 138087 138087 1 GTGSADSIATLPK Unmodified 1216.6299 0.62993134 2653 Q2NKX8 ERCC6L DNA excision repair protein ERCC-6-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.856 48.019 2 0.033945 53127 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 33.761 20.718 75859000 0 0 0 5027400 4215800 6004800 5066500 4465400 3630100 7982600 6623800 9528900 7267000 7181300 8865200 20664 2653 18849 173426;173427;173428;173429;173430;173431;173432;173433;173434;173435;173436;173437 138088;138089 138089 2 GTGVLQEEMK Unmodified 1090.5329 0.53285983 3532 Q8WTW3 COG1 Conserved oligomeric Golgi complex subunit 1 yes yes 0 0 0 By MS/MS 2 0 1 1 43.753 38.534 2 0.0095715 50088 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.17 40.874 22152000 0 22152000 0 0 0 0 0 0 0 0 0 0 0 0 0 20665 3532 18850 173438 138090 138090 1 GTGVLQEEMK Oxidation (M) 1106.5278 0.52777445 3532 Q8WTW3 COG1 Conserved oligomeric Golgi complex subunit 1 yes yes 0 1 0 By MS/MS 2 0 1 1 26.236 21.976 2 0.01846 29083 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.546 46.026 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20666 3532 18850 173439 138091 138091 5028 1 GTGVVTSVPSDSPDDIAALR Unmodified 1955.98 0.97999942 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.118 76.176 2 3.1299E-71 87546 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 187.97 175.7 362400000 0 0 0 14917000 16399000 31487000 23744000 18259000 15148000 37988000 38694000 48288000 25499000 30182000 61797000 20667 4819 18851 173440;173441;173442;173443;173444;173445;173446;173447;173448;173449;173450;173451 138092;138093;138094;138095;138096;138097;138098;138099 138094 8 GTGVVTSVPSDSPDDIAALRDLK Unmodified 2312.186 0.18596945 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 80.694 79.527 3 8.0732E-24 95027 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 105.46 97.658 1521200000 161800000 1096000000 44916000 0 6342400 16959000 6487500 11261000 13310000 27039000 23150000 24050000 12481000 15082000 62333000 20668 4819 18852 173452;173453;173454;173455;173456;173457;173458;173459;173460;173461;173462;173463;173464;173465;173466 138100;138101;138102;138103;138104;138105;138106;138107;138108;138109;138110;138111;138112;138113;138114;138115 138106 16 GTGVVTSVPSDSPDDIAALRDLKK Unmodified 2440.2809 0.28093247 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 0 2 By MS/MS 2 0 1 1 78.01 75.381 4 0.0080241 91690 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 26.627 18.73 3315700 0 0 3315700 0 0 0 0 0 0 0 0 0 0 0 0 20669 4819 18853 173467 138116 138116 1 GTGYQAGGLGSPYLR Unmodified 1495.7419 0.74194141 3004 Q6ZRI6 C15orf39 Uncharacterized protein C15orf39 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 63.973 63.916 2 0.047191 73538 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 36.847 23.891 19443000 0 0 0 3182900 1850500 0 2544200 2936000 0 2918400 0 0 3304700 2706700 0 20670 3004 18854 173468;173469;173470;173471;173472;173473;173474 138117 138117 1 GTHSPPLTPEVAGLHGPRPL Unmodified 2032.0854 0.08540797 542 O75808 CAPN15 Calpain-15 yes yes 0 0 1 By MS/MS 2 0 1 1 79.85 71.72 4 0.00034415 94158 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.505 46.7 23690000 23690000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20671 542 18855 173475 138118;138119 138119 2 GTHVIIPVGK Unmodified 1019.6128 0.61276513 1146 P22735 TGM1 Protein-glutamine gamma-glutamyltransferase K yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 42.799 42.909 2 0.0018002 48896 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 101.64 80.18 44420000 0 0 0 26483000 0 0 3031600 9172200 0 0 0 5732700 0 0 0 20672 1146 18856 173476;173477;173478;173479;173480 138120;138121;138122;138123;138124;138125 138125 6 GTHYQVACQK Unmodified 1190.5502 0.55024123 1583 P49643 PRIM2 DNA primase large subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 7 2 2 3 13.9 10.818 2;3 2.9524E-10 16022 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 191.17 162.97 297630000 220740000 42982000 33910000 0 0 0 0 0 0 0 0 0 0 0 0 20673 1583 18857 173481;173482;173483;173484;173485;173486;173487 138126;138127;138128 138127 2 GTILISSEEGETEANNHK Unmodified 1927.9123 0.91231379 4857 Q9UBT2 UBA2 SUMO-activating enzyme subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 45.111 43.55 3 3.0222E-81 53885 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 168.41 158.03 523380000 42247000 327910000 24842000 0 2048000 9221800 4345000 6944200 0 8135100 14006000 27003000 0 14113000 42570000 20674 4857 18858 173488;173489;173490;173491;173492;173493;173494;173495;173496;173497;173498;173499;173500 138129;138130;138131;138132;138133;138134;138135;138136;138137;138138;138139;138140;138141;138142;138143;138144;138145;138146;138147;138148;138149 138137 19 GTINFLHADCDK Unmodified 1389.6347 0.63469914 4123 Q9BS26 ERP44 Endoplasmic reticulum resident protein 44 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 4 8 2 1 1 1 1 1 1 1 1 1 1 56.074 53.868 2;3 4.4279E-13 75247 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 144.1 131.58 291080000 169420000 29769000 41289000 6216600 2384900 7460000 4603500 3248900 0 6034100 0 0 11967000 8677900 0 20675 4123 18859 173501;173502;173503;173504;173505;173506;173507;173508;173509;173510;173511;173512 138150;138151;138152;138153;138154;138155 138153 4 GTIQVITQGTSLK Unmodified 1344.7613 0.76127986 304 O43175 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.77 3.49 6 3 22 3 5 1 2 2 2 1 1 2 2 2 2 2 2 2 65.066 63.634 2;3 2.5992E-36 77812 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 201.75 139.78 11908000000 2517200000 5032600000 5161800 195610000 204230000 468610000 277330000 224920000 193220000 510000000 451960000 462950000 349670000 351720000 662690000 20676 304 18860 173513;173514;173515;173516;173517;173518;173519;173520;173521;173522;173523;173524;173525;173526;173527;173528;173529;173530;173531;173532;173533;173534;173535;173536;173537;173538;173539;173540;173541;173542;173543 138156;138157;138158;138159;138160;138161;138162;138163;138164;138165;138166;138167;138168;138169;138170;138171;138172;138173;138174;138175;138176;138177;138178;138179;138180;138181;138182;138183;138184 138170 25 GTISFFEIDGRK Unmodified 1368.7038 0.70376498 3697 Q92993 KAT5 Histone acetyltransferase KAT5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 75.132 75.268 3 0.0023544 86273 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.209 27.999 33338000 0 0 0 0 0 5392600 0 5415000 0 4993700 0 0 3914600 4406100 9215900 20677 3697 18861 173544;173545;173546;173547;173548;173549 138185;138186 138186 2 GTITDAPGFDPLRDAEVLRK Unmodified 2170.1382 0.1382314 1643 P50995 ANXA11 Annexin A11 yes yes 0 0 2 By matching By MS/MS 10 0 3 1 2 80.016 80.171 3;4 0.00048523 92288 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 34.649 25.988 44681000 0 0 0 0 0 1971800 0 0 0 0 0 0 0 0 42709000 20678 1643 18862 173550;173551;173552 138187;138188 138188 2 GTITVSAQELK Unmodified 1145.6292 0.62920306 4064 Q99829 CPNE1 Copine-1 yes yes 0 0 0 By MS/MS 10 0 1 1 49.66 50.371 2 0.0035092 55946 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.734 34.261 44306000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44306000 20679 4064 18863 173553 138189;138190;138191 138190 3 GTIVLASPGWTTHSISDGK Unmodified 1925.9847 0.98469087 2454 Q14914 PTGR1 Prostaglandin reductase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.57 3.96 3 4 2 1 1 1 1 1 76.664 74.094 2;3 7.2525E-77 95311 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 179.27 147.79 646100000 572340000 0 3378200 0 0 0 0 0 0 0 10900000 10272000 0 9410300 39798000 20680 2454 18864 173554;173555;173556;173557;173558;173559;173560 138192;138193;138194;138195;138196;138197;138198 138193 6 GTLDAVLTDEEEK Unmodified 1418.6777 0.67766939 3361 Q8N6R0 METTL13 Methyltransferase-like protein 13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 2 1 1 1 1 1 1 1 64.029 64.483 2 4.0388E-14 72812 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 125.23 95.559 19037000 0 0 0 0 0 0 0 0 0 0 0 19037000 0 0 0 20681 3361 18865 173561;173562;173563;173564;173565;173566;173567;173568;173569 138199;138200;138201;138202;138203;138204;138205;138206;138207 138202 8 GTLDPVEK Unmodified 857.44945 0.44944778 934 P11142 HSPA8 Heat shock cognate 71 kDa protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 2 1 1 1 1 1 1 1 26.303 26.501 2 0.0066594 28879 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 98.997 55.182 5473800000 0 0 0 214980000 257840000 371260000 296560000 248830000 200630000 434880000 722640000 749370000 425550000 494630000 1056600000 20682 934 18866 173570;173571;173572;173573;173574;173575;173576;173577;173578;173579;173580;173581;173582 138208;138209;138210;138211;138212;138213;138214;138215;138216;138217;138218 138208 5 GTLEQRGHNPEEK Unmodified 1493.7223 0.7222686 2164 Q08AD1 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 11.274 8.181 3 0.0045199 12770 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.069 29.932 23638000 15891000 0 7747600 0 0 0 0 0 0 0 0 0 0 0 0 20683 2164 18867 173583;173584 138219;138220 138219 2 GTLEQWIEK Unmodified 1102.5659 0.56587452 1091 P19525 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 7.5 3.55 1 1 4 2 1 1 1 1 71.782 70.535 2 0.020196 89861 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.26 81.952 75673000 0 56749000 0 0 0 0 3248500 0 0 2627000 0 0 0 5025300 8023200 20684 1091 18868 173585;173586;173587;173588;173589;173590 138221;138222 138221 1 GTLIAIQTVGPGK Unmodified 1253.7343 0.73433683 2486 Q15047 SETDB1 Histone-lysine N-methyltransferase SETDB1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 8.33 3.13 1 1 7 1 1 1 1 1 1 1 1 1 71.296 69.997 2 0.00040973 90507 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.113 77.851 78611000 46135000 6554700 0 0 0 0 3439900 0 0 5191800 0 5412000 1928400 2526800 7421800 20685 2486 18869 173591;173592;173593;173594;173595;173596;173597;173598;173599 138223;138224;138225;138226;138227;138228;138229;138230 138229 8 GTLIDNQFK Unmodified 1034.5397 0.53965977 4409 Q9H5V9 CXorf56 UPF0428 protein CXorf56 yes yes 0 0 0 By MS/MS 2 0 1 1 55.582 49.767 2 0.021271 64325 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.255 37.234 51696000 0 51696000 0 0 0 0 0 0 0 0 0 0 0 0 0 20686 4409 18870 173600 138231 138231 1 GTLLGESLK Unmodified 916.52295 0.52294707 529 O75663 TIPRL TIP41-like protein yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 53.175 53.188 2 0.01448 59054 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 58.23 32.831 107290000 0 0 0 6695400 5152400 21495000 0 6345000 0 25320000 0 0 0 15938000 26342000 20687 529 18871 173601;173602;173603;173604;173605;173606;173607 138232 138232 1 GTLPAVEPFQR Unmodified 1213.6455 0.64552182 914 P0DPB6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 69.153 69.193 2 0.032637 79376 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 45.137 24.235 83187000 0 0 0 5311500 5459100 6515900 9665100 6098200 3808600 8831100 11142000 10632000 7721600 8001500 0 20688 914 18872 173608;173609;173610;173611;173612;173613;173614;173615;173616;173617;173618 138233;138234;138235 138233 3 GTLQHAEIFLK Unmodified 1255.6925 0.69247202 1325 P32929 CTH Cystathionine gamma-lyase yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.15 3.37 3 10 1 2 1 1 1 1 1 1 1 1 2 62.941 61.913 2;3 2.5747E-08 79201 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 141.08 90.018 176340000 22975000 0 72126000 0 1314600 2872800 0 4844700 0 4154700 7716300 4956800 2715000 8889100 43770000 20689 1325 18873 173619;173620;173621;173622;173623;173624;173625;173626;173627;173628;173629;173630;173631 138236;138237;138238;138239;138240;138241 138241 5 GTLRYMSPEQISSQDYGK Oxidation (M) 2074.963 0.96296915 1091 P19525 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase yes yes 0 1 1 By MS/MS 2 0 1 1 58.271 50.066 3 1.9789E-05 68340 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.138 66.535 21263000 21263000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20690 1091 18874 173632 138242;138243 138243 1565 2 GTLRYMSPEQISSQDYGK Unmodified 2058.9681 0.96805453 1091 P19525 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase yes yes 0 0 1 By MS/MS 2 0 1 1 69.792 61.507 3 0.0018648 81919 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.397 38.35 51056000 51056000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20691 1091 18874 173633 138244;138245 138245 2 GTLSDEHAGVISVLAQQAAK Unmodified 1994.0433 0.043268383 337 O43504 LAMTOR5 Ragulator complex protein LAMTOR5 yes yes 0 0 0 By MS/MS 10 0 1 1 77.556 77.821 3 0.015511 89464 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 13.831 10.688 11072000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11072000 20692 337 18875 173634 138246 138246 1 GTLSFIAK Unmodified 835.48035 0.48035398 193 O14617 AP3D1 AP-3 complex subunit delta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58.071 56.972 2 0.01982 64419 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 63.306 20.533 392010000 154110000 63017000 17142000 8281500 11374000 11806000 11340000 21746000 7298800 12251000 15819000 11494000 14514000 13578000 18239000 20693 193 18876 173635;173636;173637;173638;173639;173640;173641;173642;173643;173644;173645;173646;173647;173648;173649 138247;138248;138249;138250;138251;138252;138253;138254;138255;138256 138253 10 GTLSGWILSK Unmodified 1060.5917 0.59169534 1227 P27824 CANX Calnexin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 78.229 78.383 2 0.044161 90215 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 38.754 11.5 112080000 0 0 0 0 0 14270000 0 10615000 11064000 12853000 16763000 19345000 0 11748000 15428000 20694 1227 18877 173650;173651;173652;173653;173654;173655;173656;173657 138257 138257 1 GTLSQMSGELSK Unmodified 1236.602 0.60200203 2486 Q15047 SETDB1 Histone-lysine N-methyltransferase SETDB1 yes yes 0 0 0 By MS/MS 2 0 1 1 55.777 49.963 2 0.026623 64455 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.441 50.208 78934000 0 78934000 0 0 0 0 0 0 0 0 0 0 0 0 0 20695 2486 18878 173658 138258 138258 1 GTLSQMSGELSK Oxidation (M) 1252.5969 0.59691665 2486 Q15047 SETDB1 Histone-lysine N-methyltransferase SETDB1 yes yes 0 1 0 By MS/MS 2 0 1 1 29.38 25.033 2 0.002339 32871 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.958 48.409 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20696 2486 18878 173659 138259 138259 4095 1 GTLTEAFPVLGGK Unmodified 1288.7027 0.70270235 1243 P29144 TPP2 Tripeptidyl-peptidase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 83.366 81.984 2 7.6373E-09 102619 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.28 107.25 171570000 27483000 106890000 6122400 850610 0 1435000 0 1556900 0 2144900 3463500 2728800 1308400 3704800 13888000 20697 1243 18879 173660;173661;173662;173663;173664;173665;173666;173667;173668;173669;173670;173671;173672 138260;138261;138262;138263;138264;138265;138266;138267;138268 138260 7 GTLTLCPYHSDR Unmodified 1418.6612 0.66124824 2252 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 45.758 45.942 3 0.026464 51701 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 27.862 19.349 85287000 0 0 0 3470300 7655700 6618700 0 0 0 7912200 13862000 18097000 6999600 7373600 13298000 20698 2252 18880 173673;173674;173675;173676;173677;173678;173679;173680;173681 138269 138269 1 GTLVEEINCK Unmodified 1161.57 0.56997362 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 48.108 48.122 2 0.0084283 54045 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 74.301 56.392 13168000 0 0 0 3438100 0 3048300 0 0 0 3411700 3270100 0 0 0 0 20699 5049 18881 173682;173683;173684;173685 138270;138271 138271 2 GTMDDISQEEGSSQGEDSVSGSQR Unmodified 2485.0147 0.014682964 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 41.907 42.167 3 1.2696E-09 46179 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.524 59.116 98897000 0 0 0 0 6935200 9359100 6298100 0 0 12751000 11390000 11066000 9886800 10964000 20247000 20700 2431 18882 173686;173687;173688;173689;173690;173691;173692;173693;173694 138272;138273;138274;138275;138276;138277;138278;138279;138280 138275 9 GTMDDISQEEGSSQGEDSVSGSQR Oxidation (M) 2501.0096 0.009597586 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 31.713 32.15 3 2.6813E-06 35045 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 44.258 44.258 13925000 0 0 0 0 0 0 0 0 0 5491300 0 8433400 0 0 0 20701 2431 18882 173695;173696 138281;138282;138283 138281 3993 3 GTMDPALREAAER Unmodified 1415.6827 0.68271197 649 O95373 IPO7 Importin-7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.617 38.797 3 0.0020197 41990 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 55.899 45.848 180220000 0 0 0 8103500 4350800 18591000 11254000 9618600 8057600 18323000 20847000 16345000 13018000 14508000 37202000 20702 649 18883 173697;173698;173699;173700;173701;173702;173703;173704;173705;173706;173707;173708 138284;138285;138286;138287;138288;138289;138290 138288 6 GTMDPALREAAER Oxidation (M) 1431.6776 0.67762659 649 O95373 IPO7 Importin-7 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 26.291 26.501 3 0.002386 27126 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.481 33.068 23598000 0 0 0 0 5825500 0 0 0 0 0 0 0 0 7463900 10308000 20703 649 18883 173709;173710;173711 138291;138292 138291 792 2 GTMTTGHNVADLVVILK Unmodified 1767.9553 0.955305 2206 Q12905 ILF2 Interleukin enhancer-binding factor 2 yes yes 0 0 0 By MS/MS 2 0 1 1 90.907 82.776 3 0.02487 107461 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 28.083 21.512 9468000 9468000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20704 2206 18884 173712 138293 138293 1 GTNESLER Unmodified 904.42502 0.42502394 870 P08670 VIM Vimentin no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.53 2.94 1 2 12 1 2 1 1 1 1 1 1 1 1 1 1 2 9.6702 9.0739 2 0.0025212 7909 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 147.34 63.961 1804100000 332960 187610000 0 145440000 169770000 159250000 188330000 198790000 133800000 85059000 0 166860000 144010000 75904000 148890000 20705 870 18885 173713;173714;173715;173716;173717;173718;173719;173720;173721;173722;173723;173724;173725;173726;173727 138294;138295;138296;138297;138298;138299;138300;138301;138302;138303;138304;138305;138306;138307;138308 138297 14 GTNIQENEYVK Unmodified 1293.6201 0.62009493 4119 Q9BRX2 PELO Protein pelota homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 34.467 33.943 2 0.0003202 36896 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 114.97 92.188 210570000 0 45003000 0 10106000 7922300 9241100 10033000 14487000 7948700 14966000 25274000 15642000 16864000 14329000 18756000 20706 4119 18886 173728;173729;173730;173731;173732;173733;173734;173735;173736;173737;173738;173739;173740;173741 138309;138310;138311;138312;138313;138314;138315;138316;138317;138318;138319;138320;138321;138322;138323 138321 15 GTNSHVPDCHTK Unmodified 1351.5939 0.59389696 3867 Q96HI0 SENP5 Sentrin-specific protease 5 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 7.3983 4.532 3 0.025004 7820 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 26.659 20.511 24965000 18353000 0 6611400 0 0 0 0 0 0 0 0 0 0 0 0 20707 3867 18887 173742;173743 138324 138324 1 GTNYLADVFEK Unmodified 1255.6085 0.60846762 1295 P31151 S100A7 Protein S100-A7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.65 3.65 5 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 80.464 79.604 2 2.7879E-05 92016 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 119.53 96.748 6438300000 21586000 229120000 2827400 3430100000 174050000 268440000 144800000 319610000 148390000 272390000 361320000 408370000 200110000 146320000 310900000 20708 1295 18888 173744;173745;173746;173747;173748;173749;173750;173751;173752;173753;173754;173755;173756;173757;173758;173759;173760 138325;138326;138327;138328;138329;138330;138331;138332;138333;138334;138335;138336;138337;138338;138339;138340;138341;138342;138343 138326 19 GTNYLADVFEKK Unmodified 1383.7034 0.70343063 1295 P31151 S100A7 Protein S100-A7 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 73.925 73.744 3 0.0039443 85500 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 44.829 20.932 35411000 0 0 0 26463000 0 0 0 8947900 0 0 0 0 0 0 0 20709 1295 18889 173761;173762 138344;138345 138345 2 GTPAGTTPGASQAPK Unmodified 1339.6732 0.67319314 3231 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.951 20.154 2 0.0012619 20753 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 63.408 52.257 59136000 0 0 0 4753200 3236900 4505100 4616300 3005800 3851600 5811800 5944900 8441700 3835300 4696000 6436900 20710 3231 18890 173763;173764;173765;173766;173767;173768;173769;173770;173771;173772;173773;173774 138346;138347;138348;138349;138350;138351;138352;138353 138353 8 GTPARGDQHPGSIDGDRK Unmodified 1862.8983 0.89833548 2297 Q13470 TNK1 Non-receptor tyrosine-protein kinase TNK1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 8.6471 8.8676 4 0.0039194 7284 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 22.982 13.577 17979000 0 0 0 0 0 0 0 1705400 1336600 1796700 0 4636600 3819100 2394400 2290400 20711 2297 18891 173775;173776;173777;173778;173779;173780;173781 138354;138355;138356 138356 3 GTPDTDLEVQR Unmodified 1229.5888 0.58879481 900 P0C7T5 ATXN1L Ataxin-1-like yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 36.697 37.133 2 0.025267 40940 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 56.013 37.233 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20712 900 18892 173782;173783 138357;138358 138357 2 GTPEETGSYLVSK Unmodified 1366.6616 0.6616254 4869 Q9UDY8 MALT1 Mucosa-associated lymphoid tissue lymphoma translocation protein 1 yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 44.676 44.325 2 0.00014705 55454 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.754 73.979 150130000 187460 74804000 0 0 0 0 7794700 6240400 0 7963100 0 13270000 8707000 13614000 17552000 20713 4869 18893 173784;173785;173786;173787;173788;173789;173790;173791;173792 138359;138360;138361;138362 138360 4 GTPGPDSSGSLGSGEFTGVK Unmodified 1835.8537 0.85373628 4836 Q9UBC2 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.458 59.567 2 4.3859E-15 67781 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 110.77 96.084 110690000 0 0 0 6705500 4410800 5574700 8280200 6897800 5880100 11480000 10544000 13444000 11781000 7775100 17912000 20714 4836 18894 173793;173794;173795;173796;173797;173798;173799;173800;173801;173802;173803;173804 138363;138364;138365;138366;138367;138368;138369;138370;138371;138372;138373;138374;138375 138373 13 GTPGPPPAHGAALQPHPR Unmodified 1756.9121 0.91213505 2563 Q15654 TRIP6 Thyroid receptor-interacting protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 31.083 31.272 3;4 8.29E-30 32854 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 101.53 90.673 447190000 0 0 0 19557000 22447000 27611000 27009000 25689000 21385000 43568000 42832000 62420000 34707000 40121000 79847000 20715 2563 18895 173805;173806;173807;173808;173809;173810;173811;173812;173813;173814;173815;173816;173817;173818;173819;173820;173821;173822;173823;173824;173825;173826;173827;173828 138376;138377;138378;138379;138380;138381;138382;138383;138384;138385;138386;138387;138388;138389;138390;138391;138392;138393;138394;138395;138396;138397;138398 138382 15 GTPGSPSGTQEPR Unmodified 1269.5949 0.59494282 2763 Q5SXM2 SNAPC4 snRNA-activating protein complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.544 14.707 2 1.375E-07 14020 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 97.813 84.222 86275000 0 0 0 4081500 6726800 5680700 6073200 5982600 5578900 10242000 7043200 9348900 7777900 7149900 10589000 20716 2763 18896 173829;173830;173831;173832;173833;173834;173835;173836;173837;173838;173839;173840 138399;138400;138401;138402;138403;138404;138405;138406;138407;138408;138409;138410 138400 12 GTPLELVNGDGVDSEIR Unmodified 1769.8796 0.8795571 4840 Q9UBF8 PI4KB Phosphatidylinositol 4-kinase beta yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 79.209 79.244 2 2.6356E-06 91619 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 102.87 95.984 60345000 0 0 0 7411300 2454300 6479400 4037200 0 0 8451500 5123300 6831500 4450500 4680100 10426000 20717 4840 18897 173841;173842;173843;173844;173845;173846;173847;173848;173849;173850 138411;138412;138413;138414;138415;138416;138417 138412 7 GTPLISPLIK Unmodified 1037.6485 0.64848194 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.296 77.357 2 0.0097333 88554 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.249 43.092 2334400000 0 0 0 82192000 79980000 255790000 130350000 114530000 78796000 230350000 238440000 273960000 135320000 230820000 483850000 20718 1565 18898 173851;173852;173853;173854;173855;173856;173857;173858;173859;173860;173861;173862 138418;138419;138420;138421;138422;138423;138424;138425 138421 8 GTPPLTPSDSPQTR Unmodified 1452.7209 0.72087161 2912 Q6NZY4 ZCCHC8 Zinc finger CCHC domain-containing protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 38.571 38.345 2 0.00081393 42453 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 63.408 50.832 81761000 0 11088000 0 5825600 4011700 4907900 4523300 3213200 3928500 5981900 8281400 6452200 6781200 6468600 10297000 20719 2912 18899 173863;173864;173865;173866;173867;173868;173869;173870;173871;173872;173873;173874;173875 138426;138427;138428;138429;138430;138431;138432;138433;138434;138435;138436;138437;138438 138432 13 GTPPPVFTPPLPK Unmodified 1346.7598 0.7598233 2912 Q6NZY4 ZCCHC8 Zinc finger CCHC domain-containing protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.418 79.507 2 0.0052066 91875 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 49.35 30.372 105320000 0 0 0 6685500 0 5202700 7538600 9754500 4479100 11068000 12519000 12606000 10419000 10844000 14205000 20720 2912 18900 173876;173877;173878;173879;173880;173881;173882;173883;173884;173885;173886 138439;138440;138441;138442;138443;138444;138445;138446;138447 138439 9 GTPQDLAR Unmodified 856.44028 0.44028008 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 2 1 1 1 1 1 18.184 18.272 2 0.036816 17131 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.662 29.531 187020000 0 0 0 14455000 11390000 28009000 18654000 15158000 10021000 29486000 0 0 0 21352000 38490000 20721 5187 18901 173887;173888;173889;173890;173891;173892;173893;173894;173895;173896 138448;138449;138450;138451;138452 138450 1 GTPQEPRCGFSK Unmodified 1362.635 0.63503349 570 O76003 GLRX3 Glutaredoxin-3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 26.268 22.081 3 0.0001362 31071 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.094 81.694 873410000 662390000 82342000 128680000 0 0 0 0 0 0 0 0 0 0 0 0 20722 570 18902 173897;173898;173899;173900 138453;138454;138455;138456;138457;138458;138459;138460 138456 8 GTPQQIDYAR Unmodified 1147.5622 0.56218613 3737 Q96AE4 FUBP1 Far upstream element-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.358 31.548 2 0.0015435 34144 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 95.502 69.118 1044700000 0 0 0 41637000 53688000 52901000 72133000 65423000 46784000 80238000 100990000 151470000 66674000 106160000 206560000 20723 3737 18903 173901;173902;173903;173904;173905;173906;173907;173908;173909;173910;173911;173912 138461;138462;138463;138464;138465;138466;138467;138468;138469;138470 138463 9 GTPSDGVSLSNLTQPSLTATDQQQQEEHYR Unmodified 3286.5338 0.53380571 2810 Q5VT52 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 2 2 2 75.658 75.702 3 2.1682E-46 87459 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 88.595 79.133 47515000 0 0 0 0 5159200 6884400 0 0 0 0 0 20295000 0 0 15176000 20724 2810 18904 173913;173914;173915;173916;173917;173918;173919 138471;138472;138473;138474;138475;138476;138477 138475 7 GTPSQSPVVGR Unmodified 1083.5673 0.5672715 1691 P52594 AGFG1 Arf-GAP domain and FG repeat-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 22.081 21.548 2 0.00033883 22693 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 96.668 74.176 262850000 0 17456000 0 12922000 10474000 15311000 23388000 16185000 17226000 22995000 29903000 39746000 0 0 57242000 20725 1691 18905 173920;173921;173922;173923;173924;173925;173926;173927;173928;173929;173930;173931;173932 138478;138479;138480;138481;138482;138483;138484;138485;138486;138487;138488;138489;138490 138480 12 GTPSQSPVVGRSQGQQQEK Unmodified 1996.9926 0.9926298 1691 P52594 AGFG1 Arf-GAP domain and FG repeat-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 21.65 17.8 3 0.017186 25235 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 31.402 14.12 38777000 35749000 0 3027600 0 0 0 0 0 0 0 0 0 0 0 0 20726 1691 18906 173933;173934 138491 138491 1 GTPWEGGLFK Unmodified 1090.5447 0.54474515 1952 P63279 UBE2I SUMO-conjugating enzyme UBC9 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 77.96 76.781 2 0.0038481 95871 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.439 82.452 1235000000 9646800 756790000 175950000 9485100 0 22235000 12108000 16839000 20375000 20966000 29514000 28355000 17207000 29626000 85948000 20727 1952 18907 173935;173936;173937;173938;173939;173940;173941;173942;173943;173944;173945;173946;173947;173948;173949 138492;138493;138494;138495;138496;138497;138498;138499;138500;138501;138502;138503 138495 12 GTQAGEIHDLK Unmodified 1167.5884 0.58840088 3217 Q8IUD2 ERC1 ELKS/Rab6-interacting/CAST family member 1 yes yes 0 0 0 By MS/MS 2.67 0.471 1 2 3 26.196 22.019 2;3 1.2154E-06 28977 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.42 88.063 44790000 0 44790000 0 0 0 0 0 0 0 0 0 0 0 0 0 20728 3217 18908 173950;173951;173952 138504;138505 138504 2 GTQCARIVEK Unmodified 1160.5972 0.59719142 1268 P30085 CMPK1 UMP-CMP kinase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 6 2 2 2 16.065 12.756 2;3 0.00013781 18995 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 154.84 105.52 782210000 634740000 40127000 107340000 0 0 0 0 0 0 0 0 0 0 0 0 20729 1268 18909 173953;173954;173955;173956;173957;173958 138506;138507;138508;138509 138508 3 GTQCVEQIQELVLR Unmodified 1671.8614 0.86140461 4810 Q9P287 BCCIP BRCA2 and CDKN1A-interacting protein yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 83.09 83.21 2;3 0.0013413 96040 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.801 34.432 18882000 0 0 0 0 0 2500200 0 0 0 0 0 6254100 0 0 10127000 20730 4810 18910 173959;173960;173961 138510;138511 138511 2 GTQEVLK Unmodified 773.42832 0.42831841 4468 Q9H9A6 LRRC40 Leucine-rich repeat-containing protein 40 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 13.534 13.09 2 0.024641 12551 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 82.386 7.8689 260440000 7846900 171320000 0 6407500 6599100 9506700 9579500 7441200 0 1574600 9229000 8290400 8205400 5250300 9188200 20731 4468 18911 173962;173963;173964;173965;173966;173967;173968;173969;173970;173971;173972;173973;173974 138512;138513 138512 2 GTQGAEEVLR Unmodified 1058.5356 0.53563702 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 29.577 29.691 2 0.0061036 32089 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 66.27 38.096 39506000 0 0 0 7059700 0 6869300 0 5051600 3353700 6287900 0 0 6370400 4513800 0 20732 2501 18912 173975;173976;173977;173978;173979;173980;173981 138514;138515;138516;138517;138518 138516 5 GTQGATAGASSELDASK Unmodified 1549.722 0.72199382 578 O76094 SRP72 Signal recognition particle subunit SRP72 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.34 1 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 32.2 32.046 2 2.7196E-63 92474 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 204.35 177.67 832550000 39213000 10795000 0 40579000 55400000 50503000 73311000 78849000 55768000 73357000 79173000 77566000 84028000 55631000 58379000 20733 578 18913 173982;173983;173984;173985;173986;173987;173988;173989;173990;173991;173992;173993;173994;173995;173996 138519;138520;138521;138522;138523;138524;138525;138526;138527;138528;138529;138530;138531;138532 138524 14 GTQGVVTNFEIFR Unmodified 1466.7518 0.75177781 1776 P55884 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 83.103 83.166 2 1.2291E-62 95368 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 189.58 177.01 276140000 0 0 0 4034800 5959800 14791000 7491700 11952000 11915000 24853000 26549000 57617000 15292000 24006000 71683000 20734 1776 18914 173997;173998;173999;174000;174001;174002;174003;174004;174005;174006;174007;174008 138533;138534;138535;138536;138537;138538;138539;138540;138541;138542;138543;138544;138545 138541 13 GTQLSQVEILQR Unmodified 1370.7518 0.75177781 2077 Q02535 ID3 DNA-binding protein inhibitor ID-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.956 67.039 2 1.2729E-10 76755 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 145.89 115.32 126200000 0 0 0 5722400 6550700 9899900 8674300 9418200 6351700 9113300 13292000 17991000 10914000 10043000 18228000 20735 2077 18915 174009;174010;174011;174012;174013;174014;174015;174016;174017;174018;174019;174020 138546;138547;138548;138549;138550;138551;138552;138553;138554;138555;138556;138557 138552 12 GTQNIPAGK Unmodified 884.47158 0.4715802 3208 Q86YP4 GATAD2A Transcriptional repressor p66-alpha yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 11.625 11.683 2 0.0036518 9967 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.369 42.324 9630200 0 0 0 0 1101900 3461400 0 0 0 0 0 0 0 0 5066900 20736 3208 18916 174021;174022;174023 138558 138558 1 GTQNIPAGKPSLQTSSAR Unmodified 1811.949 0.94897407 3208 Q86YP4 GATAD2A Transcriptional repressor p66-alpha yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.795 35.977 3 0.00092314 38658 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 47.916 37.577 112860000 0 0 0 8087400 11220000 3640700 8903600 8292600 2983700 9483300 10003000 14819000 9988700 10348000 15088000 20737 3208 18917 174024;174025;174026;174027;174028;174029;174030;174031;174032;174033;174034;174035 138559;138560;138561;138562 138562 4 GTQNPSQDQGNSPSGK Unmodified 1600.7077 0.70774074 781 P04279 SEMG1 Semenogelin-1;Alpha-inhibin-92;Alpha-inhibin-31;Seminal basic protein yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching 10 0 5 1 1 1 1 1 6.7966 6.8111 2 1.9193E-28 4686 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 155.02 151.37 16228000 0 0 0 9269400 808230 929390 0 3888700 0 0 0 0 1331900 0 0 20738 781 18918 174036;174037;174038;174039;174040 138563 138563 1 GTQPPSIR Unmodified 854.46102 0.46101552 3848 Q96G46 DUS3L tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 21.441 21.699 2 0.037577 21401 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 51.335 26.704 48347000 0 0 0 0 2050000 5786000 0 3682600 0 0 0 11525000 9042600 6688900 9571800 20739 3848 18919 174041;174042;174043;174044;174045;174046;174047 138564 138564 1 GTQSLPTASASK Unmodified 1146.5881 0.58806652 5268 Q9Y679 AUP1 Ancient ubiquitous protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 22.707 22.872 2 2.0536E-05 22636 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 112.13 80.195 238630000 0 0 0 14408000 16436000 19746000 16165000 18205000 13716000 23643000 25799000 38198000 27306000 25013000 0 20740 5268 18920 174048;174049;174050;174051;174052;174053;174054;174055;174056;174057;174058 138565;138566;138567;138568;138569;138570;138571;138572;138573;138574 138571 8 GTQSTEGSPVSK Unmodified 1176.5622 0.5622457 4398 Q9H4H8 FAM83D Protein FAM83D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 9.3731 9.5114 2 0.0073886 7837 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 50.194 25.675 22582000 0 0 0 0 1794800 1436100 1948800 2891200 1223500 1738200 0 4211800 2476500 1670500 3190800 20741 4398 18921 174059;174060;174061;174062;174063;174064;174065;174066;174067;174068 138575;138576;138577;138578;138579;138580;138581 138581 7 GTQTETEVELK Unmodified 1233.6089 0.60886155 2665 Q32P44 EML3 Echinoderm microtubule-associated protein-like 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 32.157 32.402 2 0.0073446 35122 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 72.042 52.28 40182000 0 0 0 0 2438800 2791700 4214300 0 1775400 3361300 5695700 5073500 5119500 2685200 7026600 20742 2665 18922 174069;174070;174071;174072;174073;174074;174075;174076;174077;174078 138582;138583;138584;138585;138586 138584 5 GTQTYSVLEGDPSENYSK Unmodified 1973.8854 0.88543034 1694 P52701 MSH6 DNA mismatch repair protein Msh6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 59.449 58.277 2 4.5261E-27 72809 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 160.84 150.79 437770000 6905000 122260000 0 17241000 14799000 26561000 19998000 23031000 17103000 33665000 34465000 29480000 26265000 26262000 39739000 20743 1694 18923 174079;174080;174081;174082;174083;174084;174085;174086;174087;174088;174089;174090;174091;174092;174093 138587;138588;138589;138590;138591;138592;138593;138594;138595;138596;138597;138598;138599 138590 13 GTQVYSPEK Unmodified 1007.4924 0.49237523 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 19.497 18.969 2 0.0032581 19372 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 90.64 72.605 290480000 13444000 44456000 0 14680000 14650000 21557000 14924000 15568000 16431000 28234000 27617000 30396000 27713000 20805000 0 20744 528 18924 174094;174095;174096;174097;174098;174099;174100;174101;174102;174103;174104;174105;174106 138600;138601;138602;138603;138604;138605;138606;138607;138608;138609;138610;138611 138610 11 GTQWYEQTK Unmodified 1139.5247 0.52473799 4345 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 33.543 33.969 2 0.044237 36149 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.867 38.091 6397400 0 0 0 0 0 0 0 0 1316700 0 0 0 0 0 5080700 20745 4345 18925 174107;174108 138612 138612 1 GTRDDEYDYLFK Acetyl (Protein N-term) 1562.6889 0.68890278 2593 Q15907;P62491 RAB11B;RAB11A Ras-related protein Rab-11B;Ras-related protein Rab-11A yes no 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 77.149 76.015 2 3.2046E-06 87585 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 111.86 99.239 2333700000 68317000 706040000 14173000 60687000 68291000 89026000 82862000 117260000 75624000 160390000 215060000 223440000 121490000 119040000 211980000 20746 2593 18926 174109;174110;174111;174112;174113;174114;174115;174116;174117;174118;174119;174120;174121;174122;174123;174124 138613;138614;138615;138616;138617;138618;138619;138620;138621;138622;138623;138624;138625;138626;138627;138628;138629 138618 17 GTRTTSNNTYEVEK Unmodified 1598.7536 0.7536283 217 O14802 POLR3A DNA-directed RNA polymerase III subunit RPC1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 4 2 2 17.682 14.19 2;3 0.0021694 20800 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.774 36.986 42846000 31690000 0 11156000 0 0 0 0 0 0 0 0 0 0 0 0 20747 217 18927 174125;174126;174127;174128 138630;138631;138632 138630 3 GTSAEQDNRFSNK Unmodified 1452.6593 0.65933399 3279 Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 10.366 10.506 3 1.9443E-08 8942 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 107.17 99.998 196170000 0 0 0 11922000 8619600 11632000 17693000 10733000 12624000 16405000 20301000 27610000 16831000 22027000 19772000 20748 3279 18928 174129;174130;174131;174132;174133;174134;174135;174136;174137;174138;174139;174140 138633;138634;138635;138636;138637;138638;138639;138640;138641;138642;138643;138644;138645;138646 138644 12 GTSDDDVPCPGYLFEEIAK Unmodified 2111.9358 0.93575135 3931 Q96N21 ENTHD2 AP-4 complex accessory subunit tepsin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.22 2.2 1 8 1 1 1 1 1 1 1 1 1 92.347 92.115 2 0.0065922 109603 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 41.052 35.329 18114000 0 3754300 0 0 0 0 0 1028300 1317300 2096100 1798000 2184500 947080 1386300 3602100 20749 3931 18929 174141;174142;174143;174144;174145;174146;174147;174148;174149 138647;138648 138648 2 GTSFDAAATSGGSASSEK Unmodified 1629.7118 0.71182307 988 P13804 ETFA Electron transfer flavoprotein subunit alpha, mitochondrial yes yes 0 0 0 By MS/MS 10 0 1 1 28.075 28.763 2 0.0051519 30028 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.806 43.953 6119400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6119400 20750 988 18930 174150 138649 138649 1 GTSFFPTAGGFR Unmodified 1243.5986 0.59857163 4492 Q9HAW4 CLSPN Claspin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 77.324 77.256 2 0.0063596 89212 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 51.436 37.857 36637000 0 0 0 4796800 4835800 0 6630600 0 0 0 0 10939000 9435300 0 0 20751 4492 18931 174151;174152;174153;174154;174155 138650;138651;138652;138653 138651 4 GTSISTKPPLTK Unmodified 1228.7027 0.70270235 1347 P35249 RFC4 Replication factor C subunit 4 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.52 3.11 5 22 2 2 1 2 2 2 2 2 2 2 2 1 2 2 1 33.961 33.088 2;3 3.1095E-13 46400 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 163.84 124.19 1734000000 236280000 71639000 1839800 87393000 88494000 115200000 129080000 120430000 95654000 158660000 169050000 106790000 131330000 111880000 110270000 20752 1347 18932 174156;174157;174158;174159;174160;174161;174162;174163;174164;174165;174166;174167;174168;174169;174170;174171;174172;174173;174174;174175;174176;174177;174178;174179;174180;174181;174182 138654;138655;138656;138657;138658;138659;138660;138661;138662;138663;138664;138665;138666;138667;138668;138669;138670;138671;138672 138662 9 GTSNMSFEELLELQSQVGTK Unmodified 2197.0573 0.057263468 3822 Q96EU6 RRP36 Ribosomal RNA processing protein 36 homolog yes yes 0 0 0 By MS/MS 10 0 1 1 24.734 24.401 4 0.044842 26042 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 14.614 0 2958700 0 0 0 0 2958700 0 0 0 0 0 0 0 0 0 0 20753 3822 18933 174183 138673 138673 1 GTSPSSSSRPQR Unmodified 1245.6062 0.60617621 3311 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 5.675 5.7924 3 0.00010691 3802 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 68.536 48.877 128980000 0 0 0 9635900 6769100 9352000 13346000 12094000 8225200 10579000 11911000 10351000 8637300 9712300 18366000 20754 3311 18934 174184;174185;174186;174187;174188;174189;174190;174191;174192;174193;174194;174195 138674;138675;138676;138677 138674 2 GTSQYYPSYSGSSR Unmodified 1538.6638 0.66375066 1028 P15923 TCF3 Transcription factor E2-alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 38.655 38.849 2 0.005265 41987 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.286 44.597 60372000 0 0 0 3126500 4130600 2842000 0 3594800 4985900 0 8979700 9054400 7488800 6205700 9964000 20755 1028 18935 174196;174197;174198;174199;174200;174201;174202;174203;174204;174205 138678;138679;138680;138681 138678 4 GTSSHLPPPPK Unmodified 1116.5928 0.59275797 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 21.618 21.827 2 0.00026218 21886 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 91.318 57.521 104670000 0 0 0 4683700 5575300 8833400 7321700 0 6627900 9658100 10665000 17812000 10891000 7569200 15030000 20756 5216 18936 174206;174207;174208;174209;174210;174211;174212;174213;174214;174215;174216 138682;138683;138684;138685;138686;138687;138688;138689;138690;138691;138692;138693 138691 12 GTSSLSQQTPR Unmodified 1160.5786 0.57856447 4743 Q9NYJ8 TAB2 TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 yes yes 0 0 0 By matching By MS/MS By matching By matching By matching 10 0 5 1 1 1 1 1 17.439 17.392 2 0.013528 17657 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 46.462 25.162 10453000 0 0 0 1491200 2028100 3356000 2141000 1437000 0 0 0 0 0 0 0 20757 4743 18937 174217;174218;174219;174220;174221 138694 138694 1 GTSTVSFK Unmodified 825.42323 0.42323303 3909 Q96KP1 EXOC2 Exocyst complex component 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 22.56 22.748 2 0.047391 23642 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 47.849 16.559 22413000 0 0 0 1772000 1356700 0 0 1876700 1560200 2902400 3505900 5504500 3934900 0 0 20758 3909 18938 174222;174223;174224;174225;174226;174227;174228;174229 138695;138696 138695 2 GTSYQSPHGIPIDLLDR Unmodified 1867.9428 0.94282606 5077 Q9Y230 RUVBL2 RuvB-like 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 1 1 1 2 1 1 2 80.04 80.118 2;3 1.0502E-13 92697 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 92.977 82.318 181220000 0 0 0 3025600 4108500 16892000 5585400 10746000 10690000 16856000 12049000 20365000 10044000 15423000 55437000 20759 5077 18939 174230;174231;174232;174233;174234;174235;174236;174237;174238;174239;174240;174241;174242;174243 138697;138698;138699;138700;138701;138702;138703;138704;138705;138706;138707 138706 11 GTTAGSSGDALGK Unmodified 1120.536 0.53603095 1028 P15923 TCF3 Transcription factor E2-alpha yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 11.891 12.04 2 0.0052066 11311 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 49.35 36.823 66825000 0 0 0 3553500 3535200 5030000 6311500 4871100 4675900 5802300 5389300 9613600 6210600 3568400 8263100 20760 1028 18940 174244;174245;174246;174247;174248;174249;174250;174251;174252;174253;174254;174255 138708;138709;138710;138711 138708 4 GTTATSAQANSTPTSVASVVTSAESPASR Unmodified 2735.321 0.32095939 3208 Q86YP4 GATAD2A Transcriptional repressor p66-alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 72.709 72.83 3 2.2335E-32 83377 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.788 77.283 111790000 0 0 0 0 7832100 10341000 7849100 10966000 8544000 13874000 9343500 9600700 8034300 11227000 14181000 20761 3208 18941 174256;174257;174258;174259;174260;174261;174262;174263;174264;174265;174266 138712;138713;138714;138715;138716;138717;138718;138719;138720;138721;138722;138723 138715 12 GTTAVLTEK Unmodified 918.50221 0.50221163 4007 Q99436 PSMB7 Proteasome subunit beta type-7 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 24.038 22.933 1;2 1.9699E-05 29071 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 172.23 73.236 1729100000 3802600 1271800000 12265000 16472000 8351600 10961000 8977800 9877600 5688200 13899000 67989000 85106000 14195000 49861000 149860000 20762 4007 18942 174267;174268;174269;174270;174271;174272;174273;174274;174275;174276;174277;174278;174279;174280;174281;174282;174283 138724;138725;138726;138727;138728;138729;138730;138731 138726 7 GTTEVNIDSETVHR Unmodified 1556.7431 0.74306362 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 20 2 2 2 2 1 2 1 2 1 1 2 2 36.807 36.954 2;3 3.4318E-05 40924 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 85.288 59.17 170390000 0 0 0 11140000 14124000 17920000 19193000 2605500 15003000 6884200 23810000 8652100 7740900 12935000 30386000 20763 3443 18943 174284;174285;174286;174287;174288;174289;174290;174291;174292;174293;174294;174295;174296;174297;174298;174299;174300;174301;174302;174303 138732;138733;138734;138735;138736;138737;138738;138739;138740;138741;138742 138739 10 GTTGLESLSLGDR Acetyl (Protein N-term) 1346.6678 0.66777341 633 O95243 MBD4 Methyl-CpG-binding domain protein 4 yes yes 1 0 0 By MS/MS 10 0 1 1 79.597 79.316 2 0.028778 91770 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 54.471 21.74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20764 633 18944 174304 138743 138743 1 GTTGTQASFLQLFEGDDHK Unmodified 2050.9596 0.95959833 1285 P30566 ADSL Adenylosuccinate lyase yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS 6.8 3.92 2 3 1 1 1 1 1 88.677 86.164 3 3.9442E-18 109099 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 111.58 108.08 215240000 44762000 152720000 0 0 0 0 0 0 0 0 2337500 0 0 1355800 14065000 20765 1285 18945 174305;174306;174307;174308;174309 138744;138745;138746;138747;138748 138744 4 GTTGTQLNGR Unmodified 1003.5047 0.50467125 4218 Q9BX40 LSM14B Protein LSM14 homolog B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 9.3761 9.5718 2 0.037846 7325 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.724 27.216 13090000 0 0 0 0 0 0 2152000 1945000 1794900 1622200 0 2546400 0 819210 2210000 20766 4218 18946 174310;174311;174312;174313;174314;174315;174316 138749 138749 1 GTTGTQLNGRQAQPSSK Unmodified 1729.8707 0.87072375 4218 Q9BX40 LSM14B Protein LSM14 homolog B yes yes 0 0 1 By MS/MS 2 0 1 1 16.737 12.528 3 0.0035253 18301 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.423 29.966 10732000 10732000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20767 4218 18947 174317 138750 138750 1 GTTIQGLPGK Unmodified 970.54475 0.54474515 3105 Q7Z589 EMSY Protein EMSY yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 37.596 38.339 2 0.018827 42083 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 62.969 30.183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20768 3105 18948 174318;174319 138751;138752 138752 2 GTTITLVLK Unmodified 944.59063 0.59063271 1002 P14625 HSP90B1 Endoplasmin yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 71.468 71.652 2 0.049332 81041 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.287 8.9296 21238000 0 0 0 0 0 3290000 0 0 1363600 2245900 4081900 0 0 3026100 7230100 20769 1002 18949 174320;174321;174322;174323;174324;174325 138753 138753 1 GTTLMIK Oxidation (M) 778.42588 0.42587556 3219 Q8IUR0 TRAPPC5 Trafficking protein particle complex subunit 5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching 10 0 8 1 1 1 1 1 1 1 1 27.994 28.314 2 0.036199 30462 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 57.463 16.543 56162000 0 0 0 4052700 0 0 0 6270300 0 7322600 9705700 7399100 7927500 4237000 9247100 20770 3219 18950 174326;174327;174328;174329;174330;174331;174332;174333 138754;138755 138754 2 GTTPLHVAAK Unmodified 993.56073 0.56072956 5126 Q9Y2X7 GIT1 ARF GTPase-activating protein GIT1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.39 4 13 1 2 1 1 1 1 1 1 1 1 2 1 1 1 1 27.834 27.254 2 0.0069088 31957 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.642 50.413 379600000 53094000 54361000 23674000 11526000 7615500 15186000 13415000 18893000 14316000 21368000 28745000 29403000 39599000 17806000 30602000 20771 5126 18951 174334;174335;174336;174337;174338;174339;174340;174341;174342;174343;174344;174345;174346;174347;174348;174349;174350 138756;138757;138758;138759;138760;138761 138757 6 GTTTVDGAGFGIDRPAELSK Unmodified 1990.996 0.99598384 3251 Q8IWZ8 SUGP1 SURP and G-patch domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 2 1 1 1 65.731 65.078 3 2.7879E-07 74704 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 67.995 57.895 158730000 0 29179000 0 6674000 7013700 10913000 8715200 8237100 14017000 15038000 15392000 11122000 0 11121000 21310000 20772 3251 18952 174351;174352;174353;174354;174355;174356;174357;174358;174359;174360;174361;174362;174363;174364 138762;138763;138764;138765;138766;138767;138768;138769;138770;138771;138772;138773;138774;138775;138776;138777 138777 15 GTVDCVQAR Unmodified 1004.4709 0.47092828 2696 Q53EL6 PDCD4 Programmed cell death protein 4 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 15.544 15.186 2 0.0051781 15008 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 81.191 54.588 103790000 0 65429000 0 0 0 3303300 0 3244000 3832300 0 11231000 16749000 0 0 0 20773 2696 18953 174365;174366;174367;174368;174369;174370 138778;138779;138780 138780 2 GTVDCVQARAALDK Unmodified 1502.7511 0.75112588 2696 Q53EL6 PDCD4 Programmed cell death protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 5 1 2 2 42.562 37.663 2;3 0.0038136 49270 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.327 40.833 141910000 13944000 86275000 41694000 0 0 0 0 0 0 0 0 0 0 0 0 20774 2696 18954 174371;174372;174373;174374;174375 138781;138782;138783;138784 138782 3 GTVDGPRNELSR Unmodified 1299.6531 0.6531264 1766 P55265 ADAR Double-stranded RNA-specific adenosine deaminase yes yes 0 0 1 By MS/MS 10 0 1 1 21.602 22.106 3 0.032416 22996 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 36.847 24.269 34945000 0 0 0 0 0 0 0 0 0 0 34945000 0 0 0 0 20775 1766 18955 174376 138785 138785 0 GTVEACASAEIEIMKK Oxidation (M) 1751.8434 0.84337129 5290 Q9Y6M1 IGF2BP2 Insulin-like growth factor 2 mRNA-binding protein 2 yes yes 0 1 1 By MS/MS By MS/MS 2 0 3 2 1 34.329 29.007 3 0.0036472 40762 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.568 7.2188 70186000 62790000 0 7396500 0 0 0 0 0 0 0 0 0 0 0 0 20776 5290 18956 174377;174378;174379 138786 138786 6697 1 GTVEGFEPADNK Unmodified 1262.5779 0.57789577 1386 P37108 SRP14 Signal recognition particle 14 kDa protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.53 3.84 2 3 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 45.608 45.205 2 7.5007E-10 102289 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 154.85 130.69 860390000 50767000 274920000 1921600 21490000 19170000 48752000 28334000 32054000 34308000 42862000 51291000 55600000 57809000 48881000 92229000 20777 1386 18957 174380;174381;174382;174383;174384;174385;174386;174387;174388;174389;174390;174391;174392;174393;174394;174395;174396 138787;138788;138789;138790;138791;138792;138793;138794;138795;138796;138797;138798;138799;138800 138795 14 GTVEPQLEAR Unmodified 1098.5669 0.56693715 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.807 34.988 2 6.2672E-08 39028 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 153.08 108 1020400000 0 0 0 49241000 39476000 84787000 57760000 50939000 50962000 96762000 142120000 143090000 1452100 90705000 213160000 20778 1124 18958 174397;174398;174399;174400;174401;174402;174403;174404;174405;174406;174407;174408 138801;138802;138803;138804;138805;138806;138807;138808;138809;138810;138811;138812;138813;138814 138814 14 GTVGEPTYDAEFQHFLR Unmodified 1965.9221 0.92209062 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 80.189 80.354 3 0.023057 93339 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 28.083 17.886 53362000 0 0 0 0 0 0 0 7200600 0 0 0 10273000 3004000 0 32884000 20779 2392 18959 174409;174410;174411;174412 138815;138816;138817 138816 3 GTVGSILDRKDETK Unmodified 1517.8049 0.80493559 1839 P61221 ABCE1 ATP-binding cassette sub-family E member 1 yes yes 0 0 2 By MS/MS 2 0 1 1 43.208 36.415 3 0.030748 50133 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.286 44.228 19974000 19974000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20780 1839 18960 174413 138818 138818 1 GTVIVQPEPVLNEDK Unmodified 1636.8672 0.8672015 1498 P46100 ATRX Transcriptional regulator ATRX yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 66.677 67.027 2 0.034608 76598 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 39.266 24.293 6644400 0 0 0 0 0 0 0 0 1966000 0 0 0 0 0 4678400 20781 1498 18961 174414;174415 138819 138819 1 GTVIVQPEPVLNEDKDDFK Unmodified 2142.0845 0.084464496 1498 P46100 ATRX Transcriptional regulator ATRX yes yes 0 0 1 By MS/MS 3 0 1 1 75.842 72.286 3 0.0015212 87043 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 45.704 40.6 4087800 0 4087800 0 0 0 0 0 0 0 0 0 0 0 0 0 20782 1498 18962 174416 138820;138821 138821 2 GTVLALTENNFDDTIAEGITFIK Unmodified 2481.2639 0.26388542 3402 Q8NBS9 TXNDC5 Thioredoxin domain-containing protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.29 0.452 5 2 2 4 1 99.776 95.265 2;3 5.3832E-68 118405 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 137.45 129.3 179400000 92457000 83611000 3328000 0 0 0 0 0 0 0 0 0 0 0 0 20783 3402 18963 174417;174418;174419;174420;174421;174422;174423 138822;138823;138824;138825;138826;138827;138828 138827 6 GTVPDDAVEALADSLGK Unmodified 1656.8206 0.82064524 1113 P20810 CAST Calpastatin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.67 3.86 14 4 24 4 12 2 2 2 2 2 2 2 2 2 2 2 2 2 90.816 89.11 2;3 7.5307E-36 106325 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 115.31 108.73 5458900000 414880000 4578800000 68907000 3145700 18131000 15067000 14089000 19076000 19687000 35302000 44394000 53683000 13084000 32064000 128560000 20784 1113 18964 174424;174425;174426;174427;174428;174429;174430;174431;174432;174433;174434;174435;174436;174437;174438;174439;174440;174441;174442;174443;174444;174445;174446;174447;174448;174449;174450;174451;174452;174453;174454;174455;174456;174457;174458;174459;174460;174461;174462;174463;174464;174465 138829;138830;138831;138832;138833;138834;138835;138836;138837;138838;138839;138840;138841;138842;138843;138844;138845;138846;138847;138848;138849;138850;138851;138852;138853;138854;138855;138856;138857;138858;138859;138860;138861;138862;138863;138864;138865;138866 138847 33 GTVPDDAVEALADSLGKK Unmodified 1784.9156 0.91560825 1113 P20810 CAST Calpastatin yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS 7 3.69 1 1 3 2 1 1 1 86.578 85.06 3 0.001702 97848 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.111 29.674 39202000 0 22140000 0 0 0 0 0 0 0 0 5396100 2277900 0 0 9388700 20785 1113 18965 174466;174467;174468;174469;174470 138867;138868;138869 138868 3 GTVQALHATGAR Unmodified 1180.6313 0.63126874 3103 Q7Z4W1 DCXR L-xylulose reductase yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 19.993 20.385 2 0.0014896 19891 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.426 36.686 9350800 0 0 0 0 0 0 0 5486700 0 0 0 0 0 0 3864100 20786 3103 18966 174471;174472 138870 138870 1 GTVQEAGTLLSSK Unmodified 1289.6827 0.68269519 3221 Q8IV38 ANKMY2 Ankyrin repeat and MYND domain-containing protein 2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 58.688 53.348 2 0.0096506 68290 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.043 33.289 386910000 0 386910000 0 0 0 0 0 0 0 0 0 0 0 0 0 20787 3221 18967 174473;174474 138871;138872 138871 2 GTVRPANDFNPDADAK Unmodified 1686.7962 0.79616182 857 P08133 ANXA6 Annexin A6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 40.548 35.456 3 0.013762 48668 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 38.696 33.601 218730000 162120000 45019000 11590000 0 0 0 0 0 0 0 0 0 0 0 0 20788 857 18968 174475;174476;174477 138873 138873 1 GTVSFHSHSDHR Unmodified 1365.6174 0.61740959 517 O75534 CSDE1 Cold shock domain-containing protein E1 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 7.6628 7.8202 3 0.037754 4987 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.976 39.753 22244000 0 0 0 0 0 782500 0 1427800 1524400 0 0 0 0 0 18509000 20789 517 18969 174478;174479;174480;174481 138874 138874 0 GTVTDFPGFDER Unmodified 1339.6044 0.60444487 873 P08758 ANXA5 Annexin A5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.734 70.798 2 2.7241E-05 80591 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.822 70.968 168090000 0 0 0 4978600 2704600 5862700 3158900 2425000 0 6088000 23099000 21854000 4151100 16518000 77247000 20790 873 18970 174482;174483;174484;174485;174486;174487;174488;174489;174490;174491;174492;174493 138875;138876;138877;138878;138879;138880;138881;138882;138883;138884;138885;138886;138887 138879 13 GTVTDFPGFDERADAETLR Unmodified 2095.9811 0.98106206 873 P08758 ANXA5 Annexin A5 yes yes 0 0 1 By MS/MS 10 0 1 1 75.624 75.935 3 8.6872E-05 87121 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.672 49.257 14742000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14742000 20791 873 18971 174494 138888 138888 1 GTVTDFPGFDERADAETLRK Unmodified 2224.076 0.076025075 873 P08758 ANXA5 Annexin A5 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 2 1 1 2 1 2 2 2 2 2 68.795 68.964 3;4 1.4683E-06 78349 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.679 62.137 568950000 0 0 0 4253500 0 16375000 5824400 6700900 11428000 3975100 56922000 66902000 10871000 44468000 341230000 20792 873 18972 174495;174496;174497;174498;174499;174500;174501;174502;174503;174504;174505;174506;174507;174508;174509;174510;174511;174512 138889;138890;138891;138892;138893;138894;138895;138896;138897;138898;138899;138900 138890 12 GTVTGQVQGPEDK Unmodified 1314.6416 0.64155866 1001 P14621 ACYP2 Acylphosphatase-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 22.563 22.684 2 0.00034514 23179 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 95.483 76.703 16049000 0 0 0 1883700 850090 1225300 1437700 1764600 0 1968300 3297100 0 0 0 3621800 20793 1001 18973 174513;174514;174515;174516;174517;174518;174519;174520;174521 138901;138902;138903 138902 3 GTVTSTATCVQLHK Unmodified 1501.7559 0.75587691 2435 Q14689 DIP2A Disco-interacting protein 2 homolog A yes yes 0 0 0 By MS/MS 2 0 1 1 41.602 34.922 3 0.026702 48099 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 23.138 0 15707000 15707000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20794 2435 18974 174522 138904 138904 1 GTVVTGTLER Unmodified 1031.5611 0.56112349 1572 P49411 TUFM Elongation factor Tu, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 35.436 35.825 2 0.018376 38509 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 48.423 22.802 26127000 0 0 0 0 0 0 3219700 0 0 0 6512400 0 0 4994400 11401000 20795 1572 18975 174523;174524;174525;174526;174527 138905;138906;138907;138908;138909 138908 5 GTVVTPVQVPLLPVPSQPR Unmodified 1983.1517 0.15169662 3823 Q96EV2 RBM33 RNA-binding protein 33 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 90.661 90.786 2 0.00021884 105205 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.314 39.558 4183500 0 0 0 0 0 0 0 0 0 923900 0 1519000 0 0 1740700 20796 3823 18976 174528;174529;174530 138910;138911 138910 2 GTVVYGEPITASLGTDGSHYWSK Unmodified 2424.1598 0.1597547 2613 Q16555 DPYSL2 Dihydropyrimidinase-related protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 4 3.03 2 2 1 2 1 1 1 82.487 79.016 3 7.9862E-38 100247 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.76 91.313 130480000 73641000 11522000 32151000 0 0 0 0 0 0 0 0 0 0 0 13163000 20797 2613 18977 174531;174532;174533;174534;174535 138912;138913;138914;138915;138916 138914 5 GTVYLTPYR Unmodified 1068.5604 0.56039521 3726 Q969T9 WBP2 WW domain-binding protein 2 yes yes 0 0 0 By MS/MS 10 0 1 1 52.88 52.95 2 0.029002 59995 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 70.919 43.665 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20798 3726 18978 174536 138917 138917 1 GTWESHPETTELVVLQGR Unmodified 2038.012 0.011968255 1382 P36915 GNL1 Guanine nucleotide-binding protein-like 1 yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 74.707 74.967 3 0.0037414 85942 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.492 25.743 13954000 0 0 0 0 0 0 0 1933900 0 0 0 3978300 0 0 8041800 20799 1382 18979 174537;174538;174539 138918 138918 1 GTWIHPEIDNPEYSPDPSIYAYDNFGVLGLDLWQVK Unmodified 4147.9844 0.98436311 1225 P27797 CALR Calreticulin yes yes 0 0 0 By MS/MS 2 0 2 2 101.36 93.23 3;4 1.0543E-60 120001 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.759 89.838 80249000 80249000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20800 1225 18980 174540;174541 138919;138920 138919 2 GTWLASGSDDLK Unmodified 1248.5986 0.59863121 2791 Q5TAQ9 DCAF8 DDB1- and CUL4-associated factor 8 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 58.041 58.382 2 0.0047471 66435 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 56.548 44.341 27812000 0 0 0 0 0 0 0 0 1673700 3513600 5654900 4571300 0 3832100 8566300 20801 2791 18981 174542;174543;174544;174545;174546;174547 138921;138922;138923;138924 138922 4 GTWSTGLPK Unmodified 945.49198 0.4919813 435 O60828 PQBP1 Polyglutamine-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.449 48.61 2 0.012914 54646 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 60.59 25.782 614650000 0 0 0 31300000 28084000 29254000 36951000 36308000 33201000 58645000 88635000 85217000 49552000 47678000 89827000 20802 435 18982 174548;174549;174550;174551;174552;174553;174554;174555;174556;174557;174558;174559 138925;138926;138927;138928;138929 138927 5 GTWVQLK Unmodified 830.46504 0.46503826 1509 P46778 RPL21 60S ribosomal protein L21 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 50.617 50.776 2 0.033387 56261 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 72.021 37.316 247980000 0 0 0 0 26710000 20577000 0 0 20056000 35982000 0 53203000 50951000 40505000 0 20803 1509 18983 174560;174561;174562;174563;174564;174565;174566 138930;138931;138932 138930 3 GTYLATFHQR Unmodified 1192.5989 0.59890598 1776 P55884 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 40.636 40.813 2;3 0.0030762 46401 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 59.067 53.032 398090000 0 0 0 20552000 15643000 27683000 23194000 24308000 15104000 33238000 45242000 50260000 30839000 35212000 76813000 20804 1776 18984 174567;174568;174569;174570;174571;174572;174573;174574;174575;174576;174577;174578;174579;174580;174581;174582;174583;174584;174585;174586;174587;174588;174589;174590 138933;138934;138935;138936;138937;138938;138939;138940;138941;138942;138943;138944;138945;138946;138947;138948 138948 10 GVAAMTMDEDYQQK Unmodified 1585.6752 0.67524333 3970 Q96RL7 VPS13A Vacuolar protein sorting-associated protein 13A yes yes 0 0 0 By MS/MS 2 0 1 1 54.31 48.504 2 0.000922 62875 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.706 68.13 5430800 0 5430800 0 0 0 0 0 0 0 0 0 0 0 0 0 20805 3970 18985 174591 138949 138949 1 GVAELGVTK Unmodified 872.49673 0.49673232 5181 Q9Y421 FAM32A Protein FAM32A yes yes 0 0 0 By matching By MS/MS By MS/MS 2 0 3 1 1 1 39.675 34.615 2 0.024396 44778 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.379 25.009 58504000 5044500 49567000 3892500 0 0 0 0 0 0 0 0 0 0 0 0 20806 5181 18986 174592;174593;174594 138950 138950 1 GVAGNPMVK Oxidation (M) 887.45349 0.4534873 3922 Q96M27 PRRC1 Protein PRRC1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 13.094 13.293 2 0.0038014 12445 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 76.847 43.331 87554000 0 0 0 0 9349500 0 0 9047800 0 15362000 0 12063000 18089000 12551000 11092000 20807 3922 18987 174595;174596;174597;174598;174599;174600;174601 138951;138952;138953;138954 138951 5416 4 GVAGNPMVK Unmodified 871.45857 0.45857268 3922 Q96M27 PRRC1 Protein PRRC1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 24.878 25.217 2 0.031208 26695 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 47.849 21.72 59179000 0 0 0 0 0 0 0 0 0 0 0 0 27259000 31920000 0 20808 3922 18987 174602;174603 138955 138955 1 GVAINFVK Unmodified 846.49634 0.49633839 1400 P38919 EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.39 3.7 5 1 12 3 1 2 1 1 1 1 1 1 1 1 1 1 1 1 62.204 60.327 1;2 0.0073617 67037 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.903 61.374 1763600000 583560000 222410000 96718000 41118000 42327000 83848000 79211000 67910000 67236000 79138000 90096000 89780000 52873000 73180000 94189000 20809 1400 18988 174604;174605;174606;174607;174608;174609;174610;174611;174612;174613;174614;174615;174616;174617;174618;174619;174620;174621 138956;138957;138958;138959;138960;138961;138962;138963;138964;138965;138966;138967;138968;138969;138970;138971;138972;138973;138974;138975 138963 18 GVAINFVTEEDK Unmodified 1320.6561 0.65614609 2396 Q14240 EIF4A2 Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 3.25 2.59 5 2 1 2 5 1 68.897 62.953 2 1.0534E-05 83456 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 111.06 92.745 544700000 60735000 483960000 0 0 0 0 0 0 0 0 0 0 0 0 0 20810 2396 18989 174622;174623;174624;174625;174626;174627;174628;174629 138976;138977;138978;138979;138980;138981 138980 6 GVAINMVTEEDK Oxidation (M) 1320.6231 0.6231314 1816 P60842 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.83 3.77 1 12 13 21 3 22 1 1 2 2 2 1 2 2 2 2 1 2 2 46.246 44.105 2 4.3788E-34 44398 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 173.37 136.68 4760400000 269050000 3289000000 20911000 34379000 44793000 185540000 105440000 27381000 58332000 173010000 136570000 115560000 41766000 91020000 167600000 20811 1816 18990 174630;174631;174632;174633;174634;174635;174636;174637;174638;174639;174640;174641;174642;174643;174644;174645;174646;174647;174648;174649;174650;174651;174652;174653;174654;174655;174656;174657;174658;174659;174660;174661;174662;174663;174664;174665;174666;174667;174668;174669;174670;174671;174672;174673;174674;174675;174676 138982;138983;138984;138985;138986;138987;138988;138989;138990;138991;138992;138993;138994;138995;138996;138997;138998;138999;139000;139001;139002;139003;139004;139005;139006;139007;139008;139009;139010;139011;139012;139013;139014;139015;139016;139017;139018;139019;139020;139021;139022;139023;139024;139025;139026;139027;139028;139029;139030;139031;139032;139033;139034;139035;139036;139037;139038;139039;139040;139041;139042;139043;139044 138982 2951 62 GVAINMVTEEDK Unmodified 1304.6282 0.62821678 1816 P60842 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.47 3.73 1 4 1 13 2 3 1 1 1 1 1 1 1 1 1 1 2 1 1 57.308 55.814 2 1.1854E-26 62395 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 168.83 134.57 11285000000 201930000 9235300000 81103000 54221000 45037000 230160000 93285000 96941000 61458000 199700000 193030000 188840000 101790000 131460000 370280000 20812 1816 18990 174677;174678;174679;174680;174681;174682;174683;174684;174685;174686;174687;174688;174689;174690;174691;174692;174693;174694;174695 139045;139046;139047;139048;139049;139050;139051;139052;139053;139054;139055;139056;139057;139058;139059;139060;139061;139062;139063;139064;139065;139066;139067;139068;139069;139070;139071;139072;139073;139074;139075 139055 31 GVAINMVTEEDKR Oxidation (M) 1476.7242 0.72424243 1816 P60842 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 2 1 2 2 2 2 2 2 1 2 2 34.35 34.532 3 4.7168E-05 37173 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 83.53 63.104 295900000 0 0 0 17177000 3725200 40341000 21652000 0 19002000 32980000 35270000 67505000 16896000 19137000 22214000 20813 1816 18991 174696;174697;174698;174699;174700;174701;174702;174703;174704;174705;174706;174707;174708;174709;174710;174711;174712;174713;174714;174715 139076;139077;139078;139079;139080;139081;139082;139083;139084;139085;139086;139087;139088;139089;139090;139091;139092 139085 2951 16 GVAINMVTEEDKR Unmodified 1460.7293 0.72932781 1816 P60842 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 48.573 48.842 3 2.2024E-08 54956 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 99.5 85.911 136260000 0 0 0 0 4441100 12997000 0 0 0 16616000 22516000 35456000 13643000 14026000 16568000 20814 1816 18991 174716;174717;174718;174719;174720;174721;174722;174723;174724;174725 139093;139094;139095;139096;139097;139098;139099;139100;139101 139098 9 GVALSNVIHK Unmodified 1036.6029 0.60292873 1383 P36952 SERPINB5 Serpin B5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 48.484 47.184 2 0.0014444 52400 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 106.38 72.069 1260000000 435410000 172950000 34339000 25128000 15842000 64817000 37437000 33901000 22350000 58825000 64766000 81456000 45785000 46233000 120740000 20815 1383 18992 174726;174727;174728;174729;174730;174731;174732;174733;174734;174735;174736;174737;174738;174739;174740;174741 139102;139103;139104;139105;139106;139107;139108;139109;139110;139111;139112;139113;139114;139115;139116;139117 139114 13 GVAPVDDGR Unmodified 884.43519 0.4351947 3859 Q96GX5 MASTL Serine/threonine-protein kinase greatwall yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 16.838 17.036 2 0.027398 16034 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.423 18.119 136160000 0 0 0 11378000 10451000 0 9905900 9501100 8977500 11309000 16359000 20669000 11879000 10792000 14936000 20816 3859 18993 174742;174743;174744;174745;174746;174747;174748;174749;174750;174751;174752 139118;139119;139120 139119 3 GVARLSAEAEK Unmodified 1129.6091 0.60913632 2501 Q15149 PLEC Plectin yes yes 0 0 1 By MS/MS 2 0 1 1 24.703 19.625 2 0.037957 27886 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.321 11.41 26442000 26442000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20817 2501 18994 174753 139121 139121 1 GVATNWLR Unmodified 915.49265 0.49265 1039 P16435 POR NADPH--cytochrome P450 reductase yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 57.81 57.924 2 0.0068442 65919 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 94.262 64.455 170380000 0 0 0 9913700 9261300 16423000 11094000 12238000 0 15618000 15343000 38916000 13842000 12006000 15725000 20818 1039 18995 174754;174755;174756;174757;174758;174759;174760;174761;174762;174763;174764 139122;139123;139124;139125;139126;139127;139128;139129 139127 8 GVAVDYLPER Unmodified 1117.5768 0.57677356 983 P13674 P4HA1 Prolyl 4-hydroxylase subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 59.456 59.493 2 0.0026435 67756 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 81.548 64.162 51018000 0 0 0 4427300 3853100 4873000 4719300 5324200 2896000 7537500 8743900 8644100 0 0 0 20819 983 18996 174765;174766;174767;174768;174769;174770;174771;174772;174773 139130;139131;139132;139133;139134;139135;139136;139137;139138;139139 139130 10 GVAVDYLPERQK Unmodified 1373.7303 0.73031409 983 P13674 P4HA1 Prolyl 4-hydroxylase subunit alpha-1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 4 2 2 54.626 48.576 2;3 0.026481 60757 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 72.607 27.446 93725000 50655000 0 43070000 0 0 0 0 0 0 0 0 0 0 0 0 20820 983 18997 174774;174775;174776;174777 139140;139141 139141 1 GVAYDVPNPVFLEQK Unmodified 1674.8617 0.86172219 2637 Q16850 CYP51A1 Lanosterol 14-alpha demethylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 83.341 82.898 2 1.3356E-09 96235 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 91.937 77.247 49335000 0 20951000 0 1005100 2590400 3539500 2284700 3344600 3244700 3850300 3435300 5089700 0 0 0 20821 2637 18998 174778;174779;174780;174781;174782;174783;174784;174785;174786;174787 139142;139143;139144;139145;139146;139147;139148;139149;139150 139148 9 GVAYDVPNPVFLEQKK Unmodified 1802.9567 0.95668521 2637 Q16850 CYP51A1 Lanosterol 14-alpha demethylase yes yes 0 0 1 By MS/MS 3 0 1 1 53.737 48.848 4 0.034162 60159 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 17.701 10.109 1282100 0 1282100 0 0 0 0 0 0 0 0 0 0 0 0 0 20822 2637 18999 174788 139151 139151 0 GVAYTLLTPK Unmodified 1061.6121 0.61209643 3199 Q86XP3 DDX42 ATP-dependent RNA helicase DDX42 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 69.367 67.975 2 0.001058 87543 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.84 79.045 486640000 148630000 106130000 18073000 12185000 13092000 17130000 17037000 13997000 13748000 24454000 21770000 24252000 13514000 15245000 27393000 20823 3199 19000 174789;174790;174791;174792;174793;174794;174795;174796;174797;174798;174799;174800;174801;174802;174803;174804;174805 139152;139153;139154;139155;139156;139157;139158;139159;139160;139161;139162;139163;139164;139165;139166;139167 139155 14 GVCRAQTMSNSGIK Oxidation (M) 1523.7184 0.71844555 2205 Q12904 AIMP1 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1;Endothelial monocyte-activating polypeptide 2 yes yes 0 1 1 By MS/MS 2 0 2 2 14.76 10.712 2;3 0.00035463 15928 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.462 62.902 99057000 99057000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20824 2205 19001 174806;174807 139168;139169 139168 3586 2 GVCRAQTMSNSGIK Unmodified 1507.7235 0.72353092 2205 Q12904 AIMP1 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1;Endothelial monocyte-activating polypeptide 2 yes yes 0 0 1 By MS/MS By matching 2 0 2 1 1 26.546 21.75 3 0.0079283 31058 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 33.304 10.584 71159000 65449000 5710400 0 0 0 0 0 0 0 0 0 0 0 0 0 20825 2205 19001 174808;174809 139170 139170 1 GVCTEAGMYALR Oxidation (M) 1342.601 0.60095617 1876 P62195 PSMC5 26S protease regulatory subunit 8 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 48.765 48.806 2 0.00047852 54679 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 75.378 61.171 124340000 0 0 0 9882800 11545000 14256000 0 0 0 21838000 26395000 40427000 0 0 0 20826 1876 19002 174810;174811;174812;174813;174814;174815;174816 139171;139172;139173;139174;139175;139176 139173 3040 6 GVCTEAGMYALR Unmodified 1326.606 0.60604155 1876 P62195 PSMC5 26S protease regulatory subunit 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.813 58.918 2 0.001746 67561 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 65.347 46.243 150360000 0 0 0 9838500 11527000 14061000 3221300 5417100 3061800 22305000 27825000 31470000 0 6459700 15170000 20827 1876 19002 174817;174818;174819;174820;174821;174822;174823;174824;174825;174826;174827;174828 139177;139178;139179;139180;139181;139182;139183;139184;139185;139186;139187;139188;139189 139189 13 GVDASNALVLPGK Unmodified 1239.6823 0.68230126 3272 Q8IY37 DHX37 Probable ATP-dependent RNA helicase DHX37 yes yes 0 0 0 By MS/MS 2 0 1 1 68.363 62.464 2 0.0037725 79451 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.298 69.479 20566000 0 20566000 0 0 0 0 0 0 0 0 0 0 0 0 0 20828 3272 19003 174829 139190 139190 1 GVDDLDFFIGDEAIEK Unmodified 1781.836 0.83596095 1835 P61158 ACTR3 Actin-related protein 3 yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 2 2 2 2 95.143 90.219 2 7.6117E-11 112923 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 143.31 126.69 173480000 49533000 123950000 0 0 0 0 0 0 0 0 0 0 0 0 0 20829 1835 19004 174830;174831;174832;174833 139191;139192;139193;139194;139195 139191 5 GVDDLDFFIGDEAIEKPTYATK Unmodified 2443.1795 0.17948709 1835 P61158 ACTR3 Actin-related protein 3 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 92.901 87.6 3 2.1072E-10 111504 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.807 73.24 26643000 24426000 0 2217500 0 0 0 0 0 0 0 0 0 0 0 0 20830 1835 19005 174834;174835 139196;139197;139198 139196 3 GVDEATIIDILTK Unmodified 1386.7606 0.76061116 773 P04083 ANXA1 Annexin A1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.22 3.97 1 8 2 12 3 6 2 1 1 1 1 1 1 1 1 1 1 1 1 95.57 93.472 2;3 5.901E-21 115898 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 158.41 127.84 3155900000 329600000 2684300000 71907000 1133500 1243100 2676800 3084500 7850000 2323000 5459200 7194700 6162700 1342200 5114300 26538000 20831 773 19006 174836;174837;174838;174839;174840;174841;174842;174843;174844;174845;174846;174847;174848;174849;174850;174851;174852;174853;174854;174855;174856;174857;174858 139199;139200;139201;139202;139203;139204;139205;139206;139207;139208;139209;139210;139211;139212;139213;139214;139215;139216;139217;139218;139219;139220;139221;139222;139223 139212 25 GVDEGPNGLK Unmodified 984.48762 0.4876242 1128 P21695 GPD1 Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic yes yes 0 0 0 By MS/MS 2 0 1 1 25.994 21.791 2 0.0081874 28707 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.77 63.331 14473000 0 14473000 0 0 0 0 0 0 0 0 0 0 0 0 0 20832 1128 19007 174859 139224 139224 1 GVDEVTIVNILTNR Unmodified 1541.8413 0.8413211 840 P07355 ANXA2 Annexin A2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 91.765 91.837 2 5.2768E-20 106528 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 167.6 148.82 35488000 0 0 0 5480100 1720100 1844600 1349700 3307200 1583700 3478700 3411600 4042600 1328800 2039900 5900900 20833 840 19008 174860;174861;174862;174863;174864;174865;174866;174867;174868;174869;174870;174871 139225;139226;139227;139228;139229;139230;139231;139232;139233;139234;139235;139236;139237 139230 13 GVDGSFLARPSK Unmodified 1232.6513 0.65133548 2122 Q06124 PTPN11 Tyrosine-protein phosphatase non-receptor type 11 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 43.188 42.982 3 0.0066475 48029 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 35.523 24.617 22897000 0 0 0 7991200 3860900 0 6170800 0 4873700 0 0 0 0 0 0 20834 2122 19009 174872;174873;174874;174875 139238;139239 139238 2 GVDIRHNK Unmodified 937.50936 0.50936269 2133 Q07020 RPL18 60S ribosomal protein L18 yes yes 0 0 1 By MS/MS 2 0 1 1 8.5464 4.9077 2 0.039116 8498 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 143.61 104.82 61918000 61918000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20835 2133 19010 174876 139240 139240 0 GVDIVMDPLGGSDTAK Unmodified 1573.7658 0.76577289 4019 Q99536 VAT1 Synaptic vesicle membrane protein VAT-1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 79.438 79.13 2 3.1343E-06 91565 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 102.62 87.419 634930000 0 443560000 0 11363000 8168800 16124000 7725200 15804000 9860500 18404000 23902000 20048000 12474000 14352000 33142000 20836 4019 19011 174877;174878;174879;174880;174881;174882;174883;174884;174885;174886;174887;174888;174889 139241;139242;139243;139244;139245;139246;139247;139248;139249;139250;139251;139252;139253;139254;139255 139253 15 GVDIVMDPLGGSDTAK Oxidation (M) 1589.7607 0.76068752 4019 Q99536 VAT1 Synaptic vesicle membrane protein VAT-1 homolog yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 70.265 68.922 2 2.9897E-11 86284 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.5 93.256 419350000 12787000 211720000 2043600 17541000 13868000 0 16182000 13235000 12674000 17876000 25382000 26021000 18192000 13533000 18294000 20837 4019 19011 174890;174891;174892;174893;174894;174895;174896;174897;174898;174899;174900;174901;174902;174903;174904 139256;139257;139258;139259;139260;139261;139262;139263;139264;139265;139266;139267;139268;139269;139270;139271;139272;139273;139274 139260 5520 19 GVDKEPLNLFYIER Unmodified 1691.8883 0.88827129 2417 Q14574 DSC3 Desmocollin-3 yes yes 0 0 1 By MS/MS By matching By MS/MS By matching 10 0 4 1 1 1 1 82.525 82.522 3 0.00045164 95433 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 53.403 47.241 12565000 0 0 0 1027100 0 692530 0 9017500 1828300 0 0 0 0 0 0 20838 2417 19012 174905;174906;174907;174908 139275;139276 139276 2 GVDLDAPGSINGVPLLEVDLDSFEDK Unmodified 2713.3334 0.33342155 2974 Q6UN15 FIP1L1 Pre-mRNA 3'-end-processing factor FIP1 yes yes 0 0 0 By MS/MS 2 0 1 1 98.69 96.264 3 0.020477 116509 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 9.7309 6.9688 3263200 0 0 3263200 0 0 0 0 0 0 0 0 0 0 0 0 20839 2974 19013 174909 139277 139277 1 GVDLHEQSQQNK Unmodified 1381.6586 0.65860571 1829 P61020 RAB5B Ras-related protein Rab-5B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.68 1.57 1 24 1 2 2 2 2 2 2 2 2 2 2 2 2 13.092 13.108 2;3 2.6008E-09 12419 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 169.65 148.95 424720000 0 15611000 0 17923000 21355000 21595000 32453000 29152000 20791000 46280000 52764000 43323000 42901000 30224000 50348000 20840 1829 19014 174910;174911;174912;174913;174914;174915;174916;174917;174918;174919;174920;174921;174922;174923;174924;174925;174926;174927;174928;174929;174930;174931;174932;174933;174934 139278;139279;139280;139281;139282;139283;139284;139285;139286;139287;139288;139289 139278 9 GVDLQENNPASR Unmodified 1298.6215 0.62149192 1646 P51148 RAB5C Ras-related protein Rab-5C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 32.392 32.603 2 7.5298E-54 35897 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 185.08 170.41 2091900000 0 0 0 125990000 138780000 172800000 0 0 0 229980000 336850000 415820000 204870000 194630000 272150000 20841 1646 19015 174935;174936;174937;174938;174939;174940;174941;174942;174943 139290;139291;139292;139293;139294;139295;139296;139297;139298;139299;139300;139301;139302;139303;139304;139305 139303 15 GVDLSGNDFK Unmodified 1050.4982 0.49818889 2228 Q13045 FLII Protein flightless-1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.218 47.384 2 0.0014403 52159 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 106.42 76.256 227680000 0 0 0 10414000 12406000 16224000 16643000 11030000 13309000 28081000 22694000 25184000 21970000 18802000 30921000 20842 2228 19016 174944;174945;174946;174947;174948;174949;174950;174951;174952;174953;174954;174955 139306;139307;139308;139309;139310;139311;139312;139313;139314;139315 139309 9 GVDLTEPTQPTR Unmodified 1312.6623 0.6622941 1104 P20339 RAB5A Ras-related protein Rab-5A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 43.295 43.355 2 2.4911E-05 48703 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 93.096 65.792 175040000 0 0 0 0 18941000 23278000 26852000 17137000 26548000 33713000 0 0 28574000 0 0 20843 1104 19017 174956;174957;174958;174959;174960;174961;174962 139316;139317;139318;139319;139320;139321;139322;139323 139316 8 GVDLVLNSLAEEK Unmodified 1385.7402 0.74021007 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.59 3.97 2 10 3 12 5 9 1 1 1 1 1 1 1 1 1 1 1 1 1 83.723 82.355 2 3.9736E-33 93916 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 169.65 118.59 8925700000 294500000 7448300000 226710000 18266000 33770000 115040000 45423000 36858000 38688000 131510000 111950000 88201000 49782000 71966000 214730000 20844 1565 19018 174963;174964;174965;174966;174967;174968;174969;174970;174971;174972;174973;174974;174975;174976;174977;174978;174979;174980;174981;174982;174983;174984;174985;174986;174987;174988;174989 139324;139325;139326;139327;139328;139329;139330;139331;139332;139333;139334;139335;139336;139337;139338;139339;139340;139341;139342;139343;139344;139345;139346;139347;139348;139349;139350;139351;139352;139353;139354;139355;139356;139357 139344 32 GVDLYVLEK Unmodified 1034.5648 0.56481189 3982 Q96S44 TP53RK TP53-regulating kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 8.23 3.24 2 1 10 2 1 1 1 1 1 1 1 1 1 1 1 74.651 73.902 2 0.016553 92621 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.906 49.403 75044000 0 31106000 4292400 0 2585100 4045300 3279100 0 2992800 5111500 4660700 4810600 3013200 3308100 5839800 20845 3982 19019 174990;174991;174992;174993;174994;174995;174996;174997;174998;174999;175000;175001;175002 139358;139359;139360 139358 3 GVDRIDENYSLPTCK Unmodified 1765.8305 0.83049842 5301 Q9Y6Y8 SEC23IP SEC23-interacting protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 55.952 56.233 3 0.012139 63621 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 43.592 37.933 111710000 0 0 0 0 0 5381900 10828000 0 7060100 11341000 13111000 16530000 12360000 10301000 24801000 20846 5301 19020 175003;175004;175005;175006;175007;175008;175009;175010;175011 139361 139361 0 GVDYIHSK Unmodified 917.46068 0.46068117 1091 P19525 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 7 3.87 3 5 1 1 1 1 1 1 1 1 19.707 18.361 2 0.012171 23363 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 104.21 78.651 96625000 17137000 37506000 18390000 0 4357300 0 0 0 3554300 5930200 6178900 0 0 3571500 0 20847 1091 19021 175012;175013;175014;175015;175016;175017;175018;175019 139362;139363;139364 139363 3 GVEAIPEGSHIK Unmodified 1235.651 0.65100113 3303 Q8N108 MIER1 Mesoderm induction early response protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching 8.29 3.28 3 11 2 1 1 1 1 1 1 1 1 1 1 1 1 37.428 36.579 2;3 0.0042496 39830 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 72.928 47.369 252400000 0 189130000 20235000 2215300 2014400 2899600 2617200 2267600 2546600 3786900 5062500 6927700 4133000 0 8572900 20848 3303 19022 175020;175021;175022;175023;175024;175025;175026;175027;175028;175029;175030;175031;175032;175033 139365;139366;139367;139368 139367 3 GVEAVAIHGGK Unmodified 1036.5665 0.56654322 4941 Q9UJV9 DDX41 Probable ATP-dependent RNA helicase DDX41 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 54.87 54.738 2 0.0014389 32936 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 88.819 59.657 139880000 0 0 9361700 17241000 6114200 10009000 7460200 12631000 4329700 13882000 13412000 18238000 11884000 8469200 6849000 20849 4941 19023 175034;175035;175036;175037;175038;175039;175040;175041;175042;175043;175044;175045;175046;175047;175048 139369;139370;139371;139372 139372 4 GVEAVGSYAENQR Unmodified 1378.6477 0.64770667 2222 Q12996 CSTF3 Cleavage stimulation factor subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 36.905 37.244 2 2.1699E-08 41257 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 108.47 98.516 26713000 0 0 0 0 0 0 0 4115000 0 8886900 0 0 0 4655400 9056000 20850 2222 19024 175049;175050;175051;175052 139373;139374 139373 2 GVEEEEEDGEMRE Oxidation (M) 1552.5835 0.58351101 1890 P62306 SNRPF Small nuclear ribonucleoprotein F yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 1 2 2 2 17.616 17.785 2 1.2271E-73 18748 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 196.44 195.87 753600000 0 0 0 48862000 63130000 51414000 60441000 51637000 46296000 80238000 58285000 3878400 80836000 66451000 142130000 20851 1890 19025 175053;175054;175055;175056;175057;175058;175059;175060;175061;175062;175063;175064;175065;175066;175067;175068;175069;175070;175071;175072;175073;175074;175075 139375;139376;139377;139378;139379;139380;139381;139382;139383;139384;139385;139386;139387 139380 3062 12 GVEEEEEDGEMRE Unmodified 1536.5886 0.58859639 1890 P62306 SNRPF Small nuclear ribonucleoprotein F yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 27 1 2 2 3 3 1 3 3 1 2 3 3 27.056 27.277 2;3 3.283E-61 30563 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 215.89 205.66 1738000000 0 0 0 75877000 109900000 83866000 114960000 114690000 65073000 151660000 241120000 161070000 142310000 175330000 302170000 20852 1890 19025 175076;175077;175078;175079;175080;175081;175082;175083;175084;175085;175086;175087;175088;175089;175090;175091;175092;175093;175094;175095;175096;175097;175098;175099;175100;175101;175102 139388;139389;139390;139391;139392;139393;139394;139395;139396;139397;139398;139399;139400;139401;139402;139403;139404;139405;139406 139403 19 GVEGLIDIENPNR Unmodified 1424.726 0.72595699 2292 Q13442 PDAP1 28 kDa heat- and acid-stable phosphoprotein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 75.171 75.372 2 9.3536E-12 86433 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 155.53 132.89 77949000 0 0 0 0 0 0 3518200 3369800 2501100 0 12172000 18628000 0 11567000 26192000 20853 2292 19026 175103;175104;175105;175106;175107;175108;175109 139407;139408;139409;139410;139411;139412;139413 139408 7 GVEGLIDIENPNRVAQTTK Unmodified 2053.0804 0.080382171 2292 Q13442 PDAP1 28 kDa heat- and acid-stable phosphoprotein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.42 3.66 3 1 8 1 2 1 1 1 1 1 1 1 1 1 75.586 74.116 3 2.2785E-17 85559 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 95.205 79.44 473740000 60116000 159440000 174540000 0 0 5235800 0 9369000 0 5003000 10748000 10164000 2340600 9303200 27474000 20854 2292 19027 175110;175111;175112;175113;175114;175115;175116;175117;175118;175119;175120;175121 139414;139415;139416;139417;139418;139419;139420;139421;139422;139423;139424 139424 10 GVEGYGNDQTYFEEIK Unmodified 1847.8214 0.82137352 3038 Q7KZ85 SUPT6H Transcription elongation factor SPT6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.12 3.26 1 1 6 2 1 1 1 1 1 1 74.126 73.065 2 3.701E-81 90389 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 204.85 177.96 177360000 0 130390000 0 0 0 0 0 0 0 7381800 7679400 0 4923200 10011000 16981000 20855 3038 19028 175122;175123;175124;175125;175126;175127;175128;175129 139425;139426;139427;139428;139429;139430;139431 139426 7 GVEIEGPLSTETNWDIAHMISGFE Oxidation (M) 2647.2112 0.21119793 1229 P28070 PSMB4 Proteasome subunit beta type-4 yes yes 0 1 0 By MS/MS 2 0 1 1 97.494 92.72 2 1.6989E-56 114546 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.06 124.15 39767000 0 39767000 0 0 0 0 0 0 0 0 0 0 0 0 0 20856 1229 19029 175130 139432 139432 1820 1 GVEIEGPLSTETNWDIAHMISGFE Unmodified 2631.2163 0.21628331 1229 P28070 PSMB4 Proteasome subunit beta type-4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 3 2 1 99.756 94.367 2;3 2.9331E-13 118697 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 44.341 42.848 205050000 98478000 103350000 3218000 0 0 0 0 0 0 0 0 0 0 0 0 20857 1229 19029 175131;175132;175133;175134;175135;175136 139433;139434;139435;139436;139437 139434 4 GVEITGFPEAQALGLEVFHAGTALK Unmodified 2554.3431 0.3431388 1134 P22102 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 99.448 95.189 2;3 1.9325E-46 117815 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.87 107.52 91311000 0 91311000 0 0 0 0 0 0 0 0 0 0 0 0 0 20858 1134 19030 175137;175138;175139 139438;139439;139440 139438 3 GVELCFPENETPPEGK Unmodified 1801.8193 0.81926503 2310 Q13535 ATR Serine/threonine-protein kinase ATR yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 76.681 72.515 2 0.00091008 90489 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.871 72.836 51739000 0 51739000 0 0 0 0 0 0 0 0 0 0 0 0 0 20859 2310 19031 175140;175141 139441;139442 139441 2 GVENPAVQESNQK Unmodified 1398.6739 0.67392142 3859 Q96GX5 MASTL Serine/threonine-protein kinase greatwall yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 21.372 21.57 2 3.2539E-09 22073 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 128.81 105.74 111770000 0 0 0 7517700 6389700 15039000 11998000 8069000 0 10202000 11409000 16187000 0 18557000 6402000 20860 3859 19032 175142;175143;175144;175145;175146;175147;175148;175149;175150;175151;175152 139443;139444;139445;139446;139447;139448;139449;139450 139448 8 GVEPGPLGPEERPPPAADASEPR Unmodified 2324.1397 0.13968796 202 O14686 KMT2D Histone-lysine N-methyltransferase 2D yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 1 1 2 56.219 56.344 3 9.7405E-14 63452 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 72.086 68.282 103360000 0 0 0 6690800 6190600 7332100 6030900 8463400 6280900 9883600 9599800 12324000 9032200 8921900 12611000 20861 202 19033 175153;175154;175155;175156;175157;175158;175159;175160;175161;175162;175163;175164;175165 139451;139452;139453;139454;139455;139456;139457;139458;139459;139460;139461;139462;139463;139464;139465;139466 139457 15 GVEPSPSPIK Unmodified 1009.5444 0.5444108 3681 Q92890 UFD1L Ubiquitin fusion degradation protein 1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 34.501 33.604 2 0.0091847 37145 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 58.23 35.187 208780000 3427700 154570000 0 0 0 5400800 3098500 0 2957300 5706700 8011200 8046400 0 4460900 13101000 20862 3681 19034 175166;175167;175168;175169;175170;175171;175172;175173;175174;175175 139467;139468;139469;139470;139471;139472;139473;139474 139468 8 GVEPSPSPIKPGDIK Unmodified 1519.8246 0.8246084 3681 Q92890 UFD1L Ubiquitin fusion degradation protein 1 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.08 3.71 3 2 8 1 4 1 1 1 1 1 1 1 1 51.614 49.46 2;3 1.0224E-12 64794 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.87 98.879 571090000 18554000 416570000 0 0 12398000 0 14244000 9080400 0 15474000 31559000 0 11300000 19430000 22480000 20863 3681 19035 175176;175177;175178;175179;175180;175181;175182;175183;175184;175185;175186;175187;175188 139475;139476;139477;139478;139479;139480;139481;139482;139483;139484 139477 8 GVERKGEEVEPAPIVDSGTVSDQDSCLQSLPDCGVK Unmodified 3856.8095 0.80951156 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 0 2 By MS/MS 2 0 1 1 76.583 73.82 4 2.6977E-11 89928 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 48.388 43.9 7823200 0 0 7823200 0 0 0 0 0 0 0 0 0 0 0 0 20864 2193 19036 175189 139485 139485 1 GVETIANDVVSLATK Unmodified 1515.8144 0.81443765 921 P10515 DLAT Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 93.744 88.848 2 6.94E-13 110351 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.95 101.23 44291000 0 44291000 0 0 0 0 0 0 0 0 0 0 0 0 0 20865 921 19037 175190 139486 139486 0 GVEVGADTGSK Unmodified 1018.4931 0.49310351 4814 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 15.41 15.542 2 2.7516E-05 14998 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 119.75 76.832 94694000 0 0 0 5484600 5117600 5988900 9266500 8777400 5619200 8376700 14142000 16471000 15450000 0 0 20866 4814 19038 175191;175192;175193;175194;175195;175196;175197;175198;175199;175200 139487;139488;139489;139490;139491;139492;139493;139494;139495;139496 139488 9 GVFPENFTERVP Unmodified 1390.6881 0.68811492 162 O00499 BIN1 Myc box-dependent-interacting protein 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 80.714 80.863 2 0.030144 93116 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.1 52.664 36261000 0 0 0 0 0 0 2417600 0 1687500 6247500 4880700 0 2832800 5055700 13139000 20867 162 19039 175201;175202;175203;175204;175205;175206;175207 139497;139498 139498 2 GVGAEPLLPWNR Unmodified 1307.6986 0.69862003 4323 Q9H0D6 XRN2 5'-3' exoribonuclease 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.922 80.982 2 1.6045E-05 93675 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 114.89 96.627 99639000 0 0 0 3294500 3860500 7185800 5726400 6543700 8145500 8959100 8677200 8583300 8742600 9008100 20912000 20868 4323 19040 175208;175209;175210;175211;175212;175213;175214;175215;175216;175217;175218;175219 139499;139500;139501;139502;139503;139504;139505;139506;139507;139508;139509;139510;139511 139500 13 GVGFGDIFK Unmodified 938.48617 0.48616764 3754 Q96B97 SH3KBP1 SH3 domain-containing kinase-binding protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS 2 0 3 1 1 1 84.196 79.097 2 0.038052 102085 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.962 48.755 24381000 14496000 6947900 2937000 0 0 0 0 0 0 0 0 0 0 0 0 20869 3754 19041 175220;175221;175222 139512;139513 139512 2 GVGGAVPGAVLEPVAR Unmodified 1447.8147 0.81471242 5182 Q9Y446 PKP3 Plakophilin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 2 1 73.536 73.539 2 0.00036436 84732 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 65.179 33.748 111440000 0 0 0 8765900 8224200 14773000 11224000 15638000 0 13090000 21621000 18102000 0 0 0 20870 5182 19042 175223;175224;175225;175226;175227;175228;175229;175230;175231;175232;175233;175234 139514;139515;139516;139517;139518;139519;139520;139521;139522;139523;139524 139515 11 GVGGNNGGNGNGGGAFSQAR Unmodified 1746.7782 0.77822034 856 P08047 SP1 Transcription factor Sp1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 24.246 24.598 2 4.8849E-53 25591 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 148.91 139.23 44839000 0 0 0 0 0 0 3837900 0 3110300 4067600 5277900 4835400 6656600 6844300 10209000 20871 856 19043 175235;175236;175237;175238;175239;175240;175241;175242;175243;175244;175245 139525;139526;139527;139528;139529;139530;139531;139532;139533;139534;139535 139530 11 GVGHEFQK Unmodified 900.44537 0.44536545 2880 Q6GYQ0 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 14.537 11.34 2 0.012182 16879 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.76 80.792 40668000 19860000 0 20809000 0 0 0 0 0 0 0 0 0 0 0 0 20872 2880 19044 175246;175247 139536 139536 1 GVGIISEGNETVEDIAAR Unmodified 1828.9167 0.91667089 792 P05023;P13637;P50993 ATP1A1;ATP1A3;ATP1A2 Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-3;Sodium/potassium-transporting ATPase subunit alpha-2 yes no 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 77.866 77.954 2 1.7027E-12 90154 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 111.39 97.23 33198000 0 0 0 0 4258000 0 0 0 2685800 5864300 0 7551800 0 5353200 7485300 20873 792 19045 175248;175249;175250;175251;175252;175253 139537;139538;139539 139539 3 GVGISVLEMSHR Unmodified 1283.6656 0.66560534 5261 Q9Y617 PSAT1 Phosphoserine aminotransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 67.234 67.574 3 0.04165 76681 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.48 35.039 29108000 0 0 0 0 0 0 0 0 0 0 3281700 0 0 2051000 23775000 20874 5261 19046 175254;175255;175256 139540 139540 0 GVGQAAIR Unmodified 770.43989 0.43988615 1073 P18206 VCL Vinculin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.694 16.873 2 0.0068778 15592 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 92.692 57.587 174200000 0 0 0 8379400 4015300 16326000 7593100 6223700 4308500 13960000 21726000 22865000 11277000 18155000 39371000 20875 1073 19047 175257;175258;175259;175260;175261;175262;175263;175264;175265;175266;175267;175268 139541;139542;139543 139542 3 GVGQADWTPDLGLR Unmodified 1483.7419 0.7419414 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.445 79.505 2 7.5229E-50 91620 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 175.64 157.03 237630000 0 0 0 6591100 12095000 18860000 10824000 16134000 17958000 25940000 23309000 29872000 16139000 21297000 38609000 20876 4285 19048 175269;175270;175271;175272;175273;175274;175275;175276;175277;175278;175279;175280 139544;139545;139546;139547;139548;139549;139550;139551;139552;139553;139554;139555;139556;139557;139558;139559;139560 139550 17 GVGQANKPDETSK Unmodified 1329.6525 0.6524577 2456 Q14966 ZNF638 Zinc finger protein 638 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.42 2 1 1 24 2 2 2 2 2 2 2 2 2 2 2 2 2 6.6482 6.509 2;3 0.0016882 4486 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 58.32 50.877 207990000 0 8515300 0 12473000 11422000 12609000 14340000 12778000 12811000 20018000 20498000 22239000 15272000 18434000 26586000 20877 2456 19049 175281;175282;175283;175284;175285;175286;175287;175288;175289;175290;175291;175292;175293;175294;175295;175296;175297;175298;175299;175300;175301;175302;175303;175304;175305;175306 139561;139562;139563;139564;139565;139566;139567;139568;139569;139570;139571;139572;139573 139562 12 GVGSGGQGPPPPR Unmodified 1161.5891 0.58906958 1546 P48634 PRRC2A Protein PRRC2A yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 17.41 17.621 2 0.024753 17855 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 36.424 21.755 7800300 0 0 0 1244400 0 1277700 0 0 1679900 0 0 1730800 0 0 1867500 20878 1546 19050 175307;175308;175309;175310;175311 139574;139575 139575 1 GVGSGGQGPPPPRR Unmodified 1317.6902 0.69018061 1546 P48634 PRRC2A Protein PRRC2A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.209 13.364 3 0.0025768 12470 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 42.209 20.163 128090000 0 0 0 6981100 9234700 7316600 11001000 7319300 6120400 11859000 11523000 15676000 16085000 9751500 15224000 20879 1546 19051 175312;175313;175314;175315;175316;175317;175318;175319;175320;175321;175322;175323 139576;139577;139578;139579;139580;139581;139582;139583 139583 6 GVGSGPHPPDTQQPSPSK Unmodified 1771.8489 0.84892567 2854 Q68CZ2 TNS3 Tensin-3 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 25.537 25.6 3 0.004205 26937 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 43.454 32.014 11224000 0 0 0 0 5702000 0 0 0 0 0 5522400 0 0 0 0 20880 2854 19052 175324;175325 139584;139585 139584 1 GVGVALDDPYENYRR Unmodified 1722.8325 0.83254733 3249 Q8IWX8 CHERP Calcium homeostasis endoplasmic reticulum protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 62.18 61.983 3 3.7439E-05 70654 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 72.175 61.359 200700000 0 0 5041100 10741000 8489300 12862000 10418000 12276000 14547000 20997000 18096000 27950000 21109000 12851000 25323000 20881 3249 19053 175326;175327;175328;175329;175330;175331;175332;175333;175334;175335;175336;175337;175338 139586;139587;139588;139589;139590;139591;139592;139593;139594;139595;139596;139597;139598;139599;139600;139601 139594 16 GVHCVMSLGVPGPATLAK Unmodified 1792.9328 0.93279542 3781 Q96CP2 FLYWCH2 FLYWCH family member 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 76.94 76.368 3 1.3662E-05 98335 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.428 66.087 377170000 39776000 0 0 6508200 10057000 16746000 10433000 23379000 19793000 23121000 34433000 71559000 23742000 22028000 75599000 20882 3781 19054 175339;175340;175341;175342;175343;175344;175345;175346;175347;175348;175349;175350;175351 139602;139603;139604;139605;139606;139607;139608;139609;139610;139611;139612;139613;139614 139608 12 GVHCVMSLGVPGPATLAK Oxidation (M) 1808.9277 0.92771004 3781 Q96CP2 FLYWCH2 FLYWCH family member 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 2 14 1 1 1 1 2 1 1 2 1 2 2 1 67.446 66.877 2;3 2.922E-06 76562 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 74.338 64.281 348390000 47935000 0 5368800 0 23735000 22916000 34361000 23924000 0 3933800 53272000 9886700 42566000 35507000 44981000 20883 3781 19054 175352;175353;175354;175355;175356;175357;175358;175359;175360;175361;175362;175363;175364;175365;175366;175367 139615;139616;139617;139618;139619;139620;139621;139622;139623;139624 139620 5329 7 GVHGGILNK Unmodified 893.5083 0.50830006 1814 P60673 PFN3 Profilin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 6.45 3.89 4 1 6 1 2 2 1 1 1 1 1 1 22.87 21.252 2 1.3922E-06 30789 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 163.84 119.73 713730000 172620000 198880000 299250000 0 0 2177400 0 0 2035300 2710600 11193000 0 0 9306200 15560000 20884 1814 19055 175368;175369;175370;175371;175372;175373;175374;175375;175376;175377;175378 139625;139626;139627;139628;139629;139630;139631;139632;139633;139634;139635;139636;139637;139638;139639;139640 139635 16 GVHIHQAGGSPPASSTSSSSLTNDVAK Unmodified 2591.2576 0.25757127 3304 Q8N122 RPTOR Regulatory-associated protein of mTOR yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 48.009 41.52 3;4 3.2285E-40 57392 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 106.11 93.913 76511000 73779000 0 2731300 0 0 0 0 0 0 0 0 0 0 0 0 20885 3304 19056 175379;175380;175381 139641;139642;139643 139643 3 GVHLGLTSSEFK Unmodified 1273.6667 0.6666512 913 P0DP91;Q8N328 PGBD3 PiggyBac transposable element-derived protein 3 yes no 0 0 0 By MS/MS 2 0 1 1 71.189 62.923 3 0.034302 83923 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 36.982 29.64 12297000 12297000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20886 913 19057 175382 139644 139644 0 GVIDLAALGITGR Unmodified 1254.7296 0.7295858 4024 Q99570 PIK3R4 Phosphoinositide 3-kinase regulatory subunit 4 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 89.109 89.255 2 0.0028842 103619 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 69.721 51.856 12434000 0 0 0 0 0 0 863450 0 1519900 2773600 0 0 0 1521200 5756200 20887 4024 19058 175383;175384;175385;175386;175387 139645;139646;139647 139645 3 GVIDLAEVEAVAPGTPTMGAPK Unmodified 2122.098 0.09800607 634 O95248 SBF1 Myotubularin-related protein 5 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 91.962 87.899 3 0.0064786 105153 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 28.505 25.836 16718000 0 16718000 0 0 0 0 0 0 0 0 0 0 0 0 0 20888 634 19059 175388;175389 139648;139649 139649 2 GVIDLIFEK Unmodified 1032.5855 0.58554733 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.56 3.62 4 1 11 2 2 1 1 1 1 1 1 1 1 1 1 1 1 89.363 88.575 2 0.0030483 102410 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.318 59.19 456860000 91705000 5154000 2254500 0 10814000 38806000 17789000 22600000 36223000 40118000 31175000 26663000 19422000 27503000 86632000 20889 2102 19060 175390;175391;175392;175393;175394;175395;175396;175397;175398;175399;175400;175401;175402;175403;175404;175405 139650;139651;139652;139653;139654;139655;139656;139657;139658;139659;139660;139661;139662;139663;139664;139665;139666;139667;139668;139669 139654 20 GVIDLVFEK Unmodified 1018.5699 0.56989727 329 O43432 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 0 0 0 By MS/MS 2 0 1 1 89.907 81.776 2 0.007262 106268 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.429 62.139 10055000 10055000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20890 329 19061 175406 139670;139671 139671 2 GVIDMGNSLIER Unmodified 1302.6602 0.66018561 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS 10 0 4 1 1 1 1 75.59 75.779 2 0.0050362 86883 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.849 61.156 56741000 0 0 0 0 0 0 0 0 0 0 9314300 0 4491800 6463100 36472000 20891 2344 19062 175407;175408;175409;175410 139672;139673 139672 2 GVIDYIFYSK Unmodified 1203.6176 0.61757574 3919 Q96LI5 CNOT6L CCR4-NOT transcription complex subunit 6-like yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 99.463 95.431 2 0.022229 117651 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.547 51.041 26332000 0 26332000 0 0 0 0 0 0 0 0 0 0 0 0 0 20892 3919 19063 175411;175412 139674 139674 1 GVILLIVDK Unmodified 968.62702 0.62701821 1974 P78344 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 83.224 82.656 2 0.026225 106576 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.825 39.156 140450000 4739800 0 0 2360400 5602500 8836200 6809400 10716000 12374000 15168000 9006000 12528000 9728300 17898000 24687000 20893 1974 19064 175413;175414;175415;175416;175417;175418;175419;175420;175421;175422;175423;175424;175425 139675;139676;139677;139678 139677 4 GVIPMNAK Unmodified 828.45276 0.45275902 5168 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.6 3.67 3 7 1 1 1 1 1 1 1 1 1 1 39.044 37.755 2 0.026808 51744 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.994 63.974 551290000 133430000 246400000 4068500 0 0 0 0 19797000 12602000 27231000 29587000 23129000 21661000 0 33374000 20894 5168 19065 175426;175427;175428;175429;175430;175431;175432;175433;175434;175435 139679;139680;139681 139680 3 GVIPMNAK Oxidation (M) 844.44767 0.44767364 5168 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.36 2.01 1 10 1 1 1 1 1 1 1 1 1 1 1 24.04 23.813 2 0.032104 29251 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 71.949 40.646 102600000 0 15206000 0 8894100 7772900 0 9487500 6875900 6277300 8767200 9261900 0 8538600 6825700 14694000 20895 5168 19065 175436;175437;175438;175439;175440;175441;175442;175443;175444;175445;175446 139682;139683 139682 2 GVIQAIQK Unmodified 855.5178 0.51780212 4566 Q9NQC3 RTN4 Reticulon-4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 37.304 37.473 2 0.0073617 40674 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 89.903 45.372 182250000 0 0 0 15617000 13142000 17107000 10727000 16718000 10844000 15928000 16119000 24350000 16139000 0 25555000 20896 4566 19066 175447;175448;175449;175450;175451;175452;175453;175454;175455;175456;175457 139684;139685;139686;139687;139688;139689;139690;139691;139692;139693;139694 139692 11 GVIQVYDLGQDGQGMSR Oxidation (M) 1837.8629 0.86286118 533 O75694 NUP155 Nuclear pore complex protein Nup155 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.47 69.543 2 1.4933E-18 79681 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 100.55 91.23 209470000 0 0 0 9845900 8680200 22031000 15959000 13524000 10808000 21093000 18802000 29703000 17478000 16263000 25279000 20897 533 19067 175458;175459;175460;175461;175462;175463;175464;175465;175466;175467;175468;175469 139695;139696;139697;139698;139699;139700;139701;139702;139703;139704 139702 696 10 GVIQVYDLGQDGQGMSR Unmodified 1821.8679 0.86794655 533 O75694 NUP155 Nuclear pore complex protein Nup155 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.864 74.927 2 1.4019E-13 85916 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 114.82 91.899 106990000 0 0 0 5550800 4335700 10562000 4428900 9385500 6219000 15318000 9381500 10959000 6670100 8498800 15685000 20898 533 19067 175470;175471;175472;175473;175474;175475;175476;175477;175478;175479;175480;175481 139705;139706;139707;139708;139709;139710;139711;139712;139713;139714;139715;139716 139708 12 GVISSVDGISLQGFPSEK Unmodified 1818.9363 0.9363437 3086 Q7Z3T8 ZFYVE16 Zinc finger FYVE domain-containing protein 16 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 88.68 84.637 2 4.5718E-11 105254 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.58 89.21 46271000 0 46271000 0 0 0 0 0 0 0 0 0 0 0 0 0 20899 3086 19068 175482;175483 139717;139718 139717 2 GVITDQNSDGYCQTGTMSR Oxidation (M) 2104.879 0.87898153 1029 P15924 DSP Desmoplakin yes yes 0 1 0 By matching By matching By matching By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 36.333 36.463 2 6.1471E-05 40363 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 60.628 55.244 26200000 0 0 0 9945900 2254400 0 0 1789300 0 0 2694300 5144300 4371500 0 0 20900 1029 19069 175484;175485;175486;175487;175488;175489 139719;139720 139720 1433 2 GVITDQNSDGYCQTGTMSR Unmodified 2088.8841 0.8840669 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 44.635 44.111 2 1.1701E-23 49948 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 98.531 90.226 16748000 0 0 0 13700000 3047800 0 0 0 0 0 0 0 0 0 0 20901 1029 19069 175490;175491 139721;139722 139721 2 GVITRPDLPSK Unmodified 1181.6768 0.67682195 28 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.33 3.77 4 8 2 1 1 1 2 1 1 1 2 44.996 43.059 2;3 0.0015632 60300 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.182 48.49 240040000 89105000 11501000 3749400 0 2546600 25322000 0 3281500 0 0 0 28966000 0 26079000 49484000 20902 28 19070 175492;175493;175494;175495;175496;175497;175498;175499;175500;175501;175502;175503 139723;139724;139725;139726;139727;139728 139727 5 GVIVESAYSDIVK Unmodified 1378.7344 0.73439641 2504 Q15172 PPP2R5A Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 75.184 75.228 2 0.0073623 86666 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 57.348 43.354 50400000 0 0 0 1941700 1916500 5645800 3816700 3861900 0 8015000 6371700 6371400 0 3763200 8696000 20903 2504 19071 175504;175505;175506;175507;175508;175509;175510;175511;175512;175513 139729;139730;139731;139732;139733 139730 5 GVLALNPLL Unmodified 908.5695 0.56950333 15 A2VDF0 FUOM Fucose mutarotase yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 98.131 91.679 2 0.0052694 115543 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.54 101.07 30417000 15085000 15331000 0 0 0 0 0 0 0 0 0 0 0 0 0 20904 15 19072 175514;175515 139734;139735 139734 2 GVLDVPACQIAIRPEGK Unmodified 1821.9771 0.97710307 1083 P19174 PLCG1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 yes yes 0 0 1 By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 75.237 75.4 3 0.0021615 86553 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.805 45.4 23946000 0 0 0 0 0 2489700 0 0 0 3437900 2852600 3934600 0 4716300 6514500 20905 1083 19073 175516;175517;175518;175519;175520;175521 139736;139737 139736 1 GVLEPLENLHK Unmodified 1247.6874 0.68738664 4511 Q9HCD6 TANC2 Protein TANC2 yes yes 0 0 0 By MS/MS 10 0 1 1 65.419 65.971 3 0.020504 74888 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 30.55 14.297 8991400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8991400 20906 4511 19074 175522 139738 139738 1 GVLFASGQNLAR Unmodified 1231.6673 0.6673199 1240 P28838 LAP3 Cytosol aminopeptidase yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 63.659 63.867 2 0.0052016 73001 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 55.064 36.284 39418000 0 0 0 0 818820 0 0 0 0 0 5417200 7234300 0 5609900 20337000 20907 1240 19075 175523;175524;175525;175526;175527 139739;139740;139741;139742;139743 139740 5 GVLFFSTPR Unmodified 1022.5549 0.5549159 4947 Q9UJX6 ANAPC2 Anaphase-promoting complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 79.426 79.463 2 0.0035332 91329 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.752 71.374 83031000 0 0 0 5770400 5105000 7135500 0 0 4086100 9328300 8574300 9344000 10918000 8816500 13952000 20908 4947 19076 175528;175529;175530;175531;175532;175533;175534;175535;175536;175537 139744;139745;139746;139747;139748;139749;139750;139751;139752 139745 9 GVLFGVPGAFTPGCSK Unmodified 1592.8021 0.80209882 1263 P30044 PRDX5 Peroxiredoxin-5, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.42 3.66 3 1 8 1 2 1 1 1 1 1 1 1 1 1 87.465 85.852 2 2.1184E-19 99306 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.85 100.2 304840000 149640000 61334000 4787400 0 0 2611000 0 2205500 0 2858300 12507000 14977000 0 10144000 43775000 20909 1263 19077 175538;175539;175540;175541;175542;175543;175544;175545;175546;175547;175548;175549 139753;139754;139755;139756;139757;139758;139759;139760;139761;139762;139763;139764;139765 139756 13 GVLFYGPPGCGK Unmodified 1250.6118 0.61177885 1755 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.4 3.68 4 1 10 1 3 1 1 1 1 1 1 1 1 1 1 1 68.554 67.335 2 0.00035988 82309 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 93.551 82.061 1451600000 998650000 136000000 81209000 12613000 6927600 16200000 9024700 0 9881600 14094000 31415000 0 15010000 31425000 89129000 20910 1755 19078 175550;175551;175552;175553;175554;175555;175556;175557;175558;175559;175560;175561;175562;175563;175564 139766;139767;139768;139769;139770;139771;139772;139773;139774;139775;139776;139777;139778;139779;139780;139781;139782 139773 17 GVLHTFSPSPK Unmodified 1168.6241 0.6240581 3208 Q86YP4 GATAD2A Transcriptional repressor p66-alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 6 1 1 1 1 1 1 40.981 41.437 3 0.01516 46152 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 45.661 30.284 72674000 0 0 0 0 0 0 0 0 0 12291000 11820000 14521000 10680000 8311500 15050000 20911 3208 19079 175565;175566;175567;175568;175569;175570 139783;139784 139783 0 GVLLAGPPGVGK Unmodified 1063.639 0.63897988 4196 Q9BVQ7 SPATA5L1 Spermatogenesis-associated protein 5-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 64.241 64.256 2 0.023823 72568 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.776 28.865 44810000 0 0 0 3552200 2999700 4710300 3964100 4425300 0 6429400 0 0 5797400 5234800 7697000 20912 4196 19080 175571;175572;175573;175574;175575;175576;175577;175578;175579 139785;139786;139787 139786 3 GVLLEIEDLQVNQFK Unmodified 1743.9407 0.94070079 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.71 3.73 2 2 3 1 2 1 1 1 1 94.148 92.136 2 1.318E-30 114542 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 172.56 165.86 39421000 1049500 33131000 2052900 1198400 0 0 0 0 0 1045300 0 0 0 0 943630 20913 1518 19081 175580;175581;175582;175583;175584;175585;175586 139788;139789;139790;139791;139792;139793 139788 6 GVLLFGPPGTGK Unmodified 1141.6495 0.64954457 1369 P35998 PSMC2 26S protease regulatory subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 79.411 78.245 2 0.00021096 90628 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 84.213 68.842 2304000000 637290000 251320000 90867000 0 97012000 136980000 47155000 47429000 39210000 221400000 213020000 283480000 51781000 65835000 121250000 20914 1369 19082 175587;175588;175589;175590;175591;175592;175593;175594;175595;175596;175597;175598;175599;175600;175601 139794;139795;139796;139797;139798;139799;139800;139801;139802;139803;139804;139805;139806;139807;139808;139809;139810 139795 14 GVLLTDGSEK Unmodified 1017.5342 0.53424004 1656 P51532 SMARCA4 Transcription activator BRG1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.24 2 1 10 1 2 1 1 1 1 1 1 1 1 1 1 36.287 35.006 2 4.8061E-07 37458 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 138.1 101.65 406650000 10241000 232430000 0 16156000 12383000 18715000 18319000 0 11069000 23440000 20295000 23259000 0 20346000 0 20915 1656 19083 175602;175603;175604;175605;175606;175607;175608;175609;175610;175611;175612;175613;175614 139811;139812;139813;139814;139815;139816;139817;139818;139819;139820;139821 139818 8 GVLLYGPPGCAK Unmodified 1230.6431 0.64307898 4196 Q9BVQ7 SPATA5L1 Spermatogenesis-associated protein 5-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 69.248 62.964 2 0.0060706 84010 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.692 55.811 128330000 6014100 122320000 0 0 0 0 0 0 0 0 0 0 0 0 0 20916 4196 19084 175615;175616;175617 139822;139823 139823 2 GVLLYGPPGCSK Unmodified 1246.638 0.63799361 3388 Q8NB90 SPATA5 Spermatogenesis-associated protein 5 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 63.928 61.196 2 0.011223 81825 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.85 55.386 37764000 17032000 12656000 0 0 0 1817500 0 0 0 0 3284700 0 2973500 0 0 20917 3388 19085 175618;175619;175620;175621;175622;175623;175624 139824;139825;139826;139827 139826 3 GVLLYGPPGTGK Unmodified 1157.6445 0.64445919 1876;3388 P62195;Q8NB90 PSMC5;SPATA5 26S protease regulatory subunit 8;Spermatogenesis-associated protein 5 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.7 3.52 6 3 21 3 4 2 2 2 2 2 2 2 2 2 2 1 1 1 62.912 61.281 2 2.9182E-05 71710 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 103.7 0 4058100000 1208100000 1309200000 61883000 88880000 131320000 145030000 62469000 49458000 45915000 235260000 247580000 350590000 24260000 26320000 71790000 20918 1876;3388 19086 175625;175626;175627;175628;175629;175630;175631;175632;175633;175634;175635;175636;175637;175638;175639;175640;175641;175642;175643;175644;175645;175646;175647;175648;175649;175650;175651;175652;175653;175654 139828;139829;139830;139831;139832;139833;139834;139835;139836;139837;139838;139839;139840;139841;139842;139843;139844;139845;139846;139847;139848;139849;139850;139851;139852;139853;139854;139855;139856;139857;139858;139859;139860;139861;139862;139863;139864 139859 31 GVLMYGPPGCGK Unmodified 1234.5838 0.58384954 1482 P43686 PSMC4 26S protease regulatory subunit 6B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 56.921 57.294 2 0.00019703 65291 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 84.476 70.269 26984000 0 0 0 0 0 0 0 0 0 5952200 7054200 13977000 0 0 0 20919 1482 19087 175655;175656;175657;175658 139865;139866;139867;139868 139865 4 GVLMYGPPGCGK Oxidation (M) 1250.5788 0.57876417 1482 P43686 PSMC4 26S protease regulatory subunit 6B yes yes 0 1 0 By MS/MS 10 0 1 1 49.106 49.841 2 0.0065165 55820 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 69.954 56.235 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20920 1482 19087 175659 139869 139869 2327 1 GVLMYGPPGTGK Oxidation (M) 1191.5958 0.59579444 1066 P17980 PSMC3 26S protease regulatory subunit 6A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.7 3.49 4 3 16 2 3 2 2 2 2 1 1 1 2 2 2 1 52.573 50.75 2 1.3726E-10 62495 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 126.31 118.75 899040000 177840000 243250000 22516000 36679000 53649000 70860000 14323000 0 0 87724000 70874000 121320000 0 0 0 20921 1066 19088 175660;175661;175662;175663;175664;175665;175666;175667;175668;175669;175670;175671;175672;175673;175674;175675;175676;175677;175678;175679;175680;175681;175682 139870;139871;139872;139873;139874;139875;139876;139877;139878;139879;139880;139881;139882;139883;139884;139885;139886;139887;139888;139889;139890;139891;139892;139893;139894 139877 1502 21 GVLMYGPPGTGK Unmodified 1175.6009 0.60087982 1066 P17980 PSMC3 26S protease regulatory subunit 6A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 59.864 58.529 2 2.1055E-05 66174 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 103.88 89.882 776870000 168880000 279530000 14846000 13970000 20492000 29399000 8634000 10781000 7360500 43014000 56542000 64643000 10561000 14294000 33916000 20922 1066 19088 175683;175684;175685;175686;175687;175688;175689;175690;175691;175692;175693;175694;175695;175696;175697;175698 139895;139896;139897;139898;139899;139900;139901;139902;139903;139904;139905;139906;139907;139908;139909;139910;139911;139912 139910 18 GVLNVHPAASASK Unmodified 1249.6779 0.67788459 3631 Q92576 PHF3 PHD finger protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 1 2 2 2 1 2 2 2 32.354 32.518 2;3 0.0011003 34107 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.906 47.042 112320000 0 0 0 7183500 5099900 16193000 8290400 2547400 11858000 11695000 13548000 2836800 11065000 9339100 12667000 20923 3631 19089 175699;175700;175701;175702;175703;175704;175705;175706;175707;175708;175709;175710;175711;175712;175713;175714;175715;175716;175717;175718;175719;175720 139913;139914;139915;139916;139917;139918;139919;139920;139921 139917 9 GVLNVHPAASASKPSADQIR Unmodified 2017.0705 0.070486187 3631 Q92576 PHF3 PHD finger protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 45.814 45.993 4 0.011568 50456 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 29.444 19.863 128540000 0 0 0 8773500 7819100 0 11170000 9494800 6855900 9010700 16376000 21470000 13796000 10367000 13404000 20924 3631 19090 175721;175722;175723;175724;175725;175726;175727;175728;175729;175730;175731 139922;139923;139924 139923 2 GVLNWSSGPR Unmodified 1071.5461 0.54614213 2882 Q6IA86 ELP2 Elongator complex protein 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 58.368 58.748 2 0.017731 66267 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 48.794 34.019 17702000 0 0 0 0 0 0 0 2307200 0 0 2611300 3835100 0 2452500 6495600 20925 2882 19091 175732;175733;175734;175735;175736 139925;139926 139926 2 GVLQSLIEK Unmodified 985.5808 0.5807963 17 A3KN83 SBNO1 Protein strawberry notch homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 74.504 73.939 2 0.0043294 85414 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 87.181 55.878 116110000 21975000 0 0 3691900 4724400 8265300 6168900 7692400 6692200 9883100 9877300 5985700 8284900 6926000 15942000 20926 17 19092 175737;175738;175739;175740;175741;175742;175743;175744;175745;175746;175747;175748;175749 139927;139928;139929;139930;139931;139932;139933;139934;139935;139936;139937;139938;139939;139940 139940 14 GVLQTAAER Unmodified 943.50869 0.50869399 3518 Q8TEQ6 GEMIN5 Gem-associated protein 5 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.642 14.806 2 0.036316 14405 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 45.738 4.1073 148880000 0 0 0 8292800 6053900 5379500 7121800 7797400 8599700 12250000 14985000 15114000 19708000 18085000 25490000 20927 3518 19093 175750;175751;175752;175753;175754;175755;175756;175757;175758;175759;175760;175761 139941 139941 1 GVLSAFNFGTVPSNN Unmodified 1522.7416 0.74160705 282 O15397 IPO8 Importin-8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 90.792 90.274 2 0.0035564 105060 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 44.425 36.779 92652000 0 34581000 0 1313200 3652600 6315200 3071500 3908200 3803300 7908000 4751600 5490600 3060900 4394300 10401000 20928 282 19094 175762;175763;175764;175765;175766;175767;175768;175769;175770;175771;175772;175773;175774;175775 139942;139943;139944;139945 139942 4 GVLSGEECK Unmodified 977.4488 0.44879585 4669 Q9NVI1 FANCI Fanconi anemia group I protein yes yes 0 0 0 By MS/MS By MS/MS 5 3.56 1 1 1 2 1 21.28 18.887 2 0.025356 24732 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.39 83.949 57193000 0 51651000 0 0 0 0 0 0 0 0 0 5541900 0 0 0 20929 4669 19095 175776;175777;175778 139946;139947 139946 1 GVLTLSFALADK Unmodified 1233.6969 0.69688869 3844 Q96G03 PGM2 Phosphoglucomutase-2 yes yes 0 0 0 By MS/MS 2 0 1 1 103.77 99.04 2 0.028292 122279 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 51.066 21.905 2336600 0 2336600 0 0 0 0 0 0 0 0 0 0 0 0 0 20930 3844 19096 175779 139948 139948 1 GVLTQTLEMR Oxidation (M) 1162.6016 0.6016081 3621 Q92547 TOPBP1 DNA topoisomerase 2-binding protein 1 yes yes 0 1 0 By MS/MS By matching By matching 10 0 3 1 1 1 52.829 52.96 2 0.0077159 59954 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 53.756 22.683 52025000 0 0 0 0 0 20251000 0 0 15224000 16550000 0 0 0 0 0 20931 3621 19097 175780;175781;175782 139949 139949 5120 1 GVLTSGHQPSSVLR Unmodified 1436.7736 0.77357588 5297 Q9Y6X2 PIAS3 E3 SUMO-protein ligase PIAS3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 43.607 43.781 3 0.0059662 49047 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 41.092 26.405 80509000 0 0 0 4828400 4636900 0 6294400 10328000 0 0 16810000 14071000 0 9756200 13785000 20932 5297 19098 175783;175784;175785;175786;175787;175788;175789;175790 139950;139951;139952;139953;139954 139951 5 GVLTTEK Unmodified 746.41742 0.41741937 4396 Q9H4A6 GOLPH3 Golgi phosphoprotein 3 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 17.659 14.12 1 0.012243 18849 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 154.09 69.736 20265000 0 20265000 0 0 0 0 0 0 0 0 0 0 0 0 0 20933 4396 19099 175791;175792 139955 139955 0 GVLVALPK Unmodified 795.52182 0.52182486 3353 Q8N5U6 RNF10 RING finger protein 10 yes yes 0 0 0 By MS/MS 10 0 1 1 64.056 64.254 2 0.041266 72681 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 50.025 31.219 2839000 0 0 0 0 0 0 0 0 0 0 0 0 0 2839000 0 20934 3353 19100 175793 139956 139956 1 GVLVDEENICESCLSPILPSDAAK Unmodified 2615.2459 0.24586887 1594 P49754 VPS41 Vacuolar protein sorting-associated protein 41 homolog yes yes 0 0 0 By MS/MS 3 0 1 1 88.724 85.513 3 0.00024786 102442 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 33.909 31.068 5207100 0 5207100 0 0 0 0 0 0 0 0 0 0 0 0 0 20935 1594 19101 175794 139957 139957 1 GVLVVGIGSGTK Unmodified 1085.6445 0.64445919 3572 Q8WWH5 TRUB1 Probable tRNA pseudouridine synthase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.632 62.727 2 0.0013559 72325 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 68.557 57.692 78616000 0 0 0 6539000 4179800 7686300 5389800 6079400 5152500 8609800 6891500 7799900 5531000 5321300 9435300 20936 3572 19102 175795;175796;175797;175798;175799;175800;175801;175802;175803;175804;175805;175806 139958;139959;139960;139961;139962;139963;139964;139965;139966;139967;139968 139968 11 GVMGGQSAGPQHTEAETIQK Unmodified 2024.9586 0.95855248 430 O60763 USO1 General vesicular transport factor p115 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 33.625 33.865 3 9.7914E-72 37120 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 126.84 117.98 265780000 0 0 0 0 10536000 31683000 13227000 12080000 7856400 28696000 46405000 31870000 21475000 19611000 42343000 20937 430 19103 175807;175808;175809;175810;175811;175812;175813;175814;175815;175816;175817 139969;139970;139971;139972;139973;139974;139975;139976;139977;139978;139979 139975 11 GVMGGQSAGPQHTEAETIQK Oxidation (M) 2040.9535 0.9534671 430 O60763 USO1 General vesicular transport factor p115 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 24.759 24.941 3 7.8471E-13 26057 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 84.581 78.099 104570000 0 0 0 7918700 8343100 14503000 9937500 0 0 10143000 0 14528000 13408000 8120600 17672000 20938 430 19103 175818;175819;175820;175821;175822;175823;175824;175825;175826 139980;139981;139982;139983;139984;139985;139986;139987;139988;139989 139987 550 9 GVNCIDYYSGGDK Unmodified 1446.6085 0.60854397 1358 P35606 COPB2 Coatomer subunit beta' yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.04 2.54 2 1 21 1 2 1 2 2 2 2 2 2 2 2 2 1 1 43.484 42.863 2;3 5.9487E-21 56915 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 162.38 149.78 639220000 13113000 412790000 0 7261700 9678600 18928000 12914000 14257000 20825000 17482000 25370000 23172000 21204000 16123000 26106000 20939 1358 19104 175827;175828;175829;175830;175831;175832;175833;175834;175835;175836;175837;175838;175839;175840;175841;175842;175843;175844;175845;175846;175847;175848;175849;175850 139990;139991;139992;139993;139994;139995;139996;139997;139998;139999;140000;140001;140002;140003;140004;140005;140006 139993 17 GVNFYGPK Unmodified 880.4443 0.44430282 2791 Q5TAQ9 DCAF8 DDB1- and CUL4-associated factor 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 41.664 40.277 2 0.012144 45474 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 75.311 57.544 165990000 77199000 31098000 3279100 0 3279400 4405000 3950200 3364700 3079600 3960200 8650800 0 6178900 5714400 11828000 20940 2791 19105 175851;175852;175853;175854;175855;175856;175857;175858;175859;175860;175861;175862;175863;175864 140007;140008;140009;140010;140011;140012;140013;140014;140015;140016;140017;140018;140019;140020 140007 14 GVNGLINGK Unmodified 870.49232 0.49231565 3581 Q8WX93 PALLD Palladin yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 32.438 32.69 2 0.0097689 36126 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 65.777 28.683 28396000 0 0 0 0 0 6597300 0 6617800 5307500 0 0 9873000 0 0 0 20941 3581 19106 175865;175866;175867;175868 140021;140022;140023 140021 2 GVNIGGAGSYIYEK Unmodified 1426.7092 0.70924429 1706 P52943 CRIP2 Cysteine-rich protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 5.4 3.77 4 2 4 2 3 1 1 1 1 1 66.81 64.77 2 1.133E-23 82578 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 163.12 150.16 833750000 375510 753850000 7624600 0 0 4219600 0 0 0 1678400 0 0 0 18188000 47814000 20942 1706 19107 175869;175870;175871;175872;175873;175874;175875;175876;175877;175878 140024;140025;140026;140027;140028 140024 5 GVNLDPLGK Unmodified 911.50763 0.50763136 1497 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 58.508 58.91 2 0.03145 67412 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 47.749 29.614 5737600 0 0 0 0 0 0 0 0 0 0 0 0 2816800 0 2920800 20943 1497 19108 175879;175880 140029 140029 1 GVNLPGAAVDLPAVSEK Unmodified 1635.8832 0.88318591 1000 P14618 PKM Pyruvate kinase PKM yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.26 3.69 2 5 7 25 5 9 2 2 2 2 2 2 2 3 2 2 2 2 83.563 82.432 2;3 1.1836E-18 93365 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 126.95 126.95 47931000000 1268200000 34281000000 0 475150000 672070000 869250000 840330000 873910000 793640000 885960000 1658400000 1787100000 304400000 699510000 2521400000 20944 1000 19109 175881;175882;175883;175884;175885;175886;175887;175888;175889;175890;175891;175892;175893;175894;175895;175896;175897;175898;175899;175900;175901;175902;175903;175904;175905;175906;175907;175908;175909;175910;175911;175912;175913;175914;175915;175916;175917;175918;175919 140030;140031;140032;140033;140034;140035;140036;140037;140038;140039;140040;140041;140042;140043;140044;140045;140046;140047;140048;140049;140050;140051;140052;140053;140054;140055;140056;140057;140058;140059;140060;140061;140062;140063;140064;140065;140066;140067;140068;140069;140070 140043 35 GVNNISVSLK Unmodified 1029.5819 0.58185893 3432 Q8NEY1 NAV1 Neuron navigator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.357 52.507 2 0.0049755 58403 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 70.816 27.57 82787000 0 0 0 4005300 4963000 7037000 0 5834400 4971500 7199400 8776200 10477000 9987700 7031200 12504000 20945 3432 19110 175920;175921;175922;175923;175924;175925;175926;175927;175928;175929;175930;175931 140071;140072;140073;140074;140075;140076;140077;140078;140079;140080;140081;140082 140078 12 GVNTDSGSVCR Unmodified 1150.5037 0.50368497 972 P12955 PEPD Xaa-Pro dipeptidase yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 12.596 12.981 2 0.00049528 11632 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 85.731 42.484 21274000 0 0 0 0 0 0 0 0 0 0 4706200 5584100 0 2608200 8375700 20946 972 19111 175932;175933;175934;175935 140083;140084;140085 140084 3 GVNTFSPEGR Unmodified 1062.5094 0.50942227 1228 P28066 PSMA5 Proteasome subunit alpha type-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.421 32.608 2 0.00049863 36029 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 124.74 85.967 289790000 0 0 0 21748000 10712000 22679000 12843000 12976000 7337600 18123000 39421000 37055000 15390000 26680000 64823000 20947 1228 19112 175936;175937;175938;175939;175940;175941;175942;175943;175944;175945;175946;175947 140086;140087;140088;140089;140090;140091;140092;140093;140094;140095;140096;140097 140096 11 GVNTGAVGSYIYDRDPEGK Unmodified 1996.949 0.94903365 1706 P52943 CRIP2 Cysteine-rich protein 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 67.631 61.612 3 0.0014464 81727 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.916 41.818 94043000 30361000 0 63682000 0 0 0 0 0 0 0 0 0 0 0 0 20948 1706 19113 175948;175949 140098;140099 140098 2 GVNTSVMLENLR Unmodified 1331.6867 0.68673471 3964 Q96R06 SPAG5 Sperm-associated antigen 5 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 74.437 74.516 2 0.00086046 85351 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.298 65.212 18954000 0 0 0 0 2663100 0 0 0 0 4308900 0 5189700 0 0 6792400 20949 3964 19114 175950;175951;175952;175953 140100;140101;140102 140101 3 GVNTVFHCASPPPSSNNK Unmodified 1911.8897 0.88974463 2569 Q15738 NSDHL Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42.2 41.521 3 9.0254E-06 46196 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 43.767 36.077 150140000 25207000 0 3826500 5122400 8245300 8830100 6892200 9692400 8708600 11246000 12179000 17426000 9957500 10005000 12801000 20950 2569 19115 175954;175955;175956;175957;175958;175959;175960;175961;175962;175963;175964;175965;175966;175967 140103;140104;140105;140106;140107;140108;140109;140110;140111;140112;140113;140114;140115;140116;140117;140118;140119;140120 140112 17 GVNVSALSR Unmodified 901.49813 0.49812931 1398 P38606 ATP6V1A V-type proton ATPase catalytic subunit A yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 39.008 39.12 2 0.0083723 43290 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 69.812 38.522 27560000 0 0 0 0 0 0 16175000 11385000 0 0 0 0 0 0 0 20951 1398 19116 175968;175969;175970;175971;175972;175973;175974;175975;175976 140121;140122;140123;140124;140125;140126;140127;140128 140125 8 GVPAFFR Unmodified 792.42826 0.42825883 4323 Q9H0D6 XRN2 5'-3' exoribonuclease 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 66.462 66.586 2 0.025324 75421 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.999 65.778 41664000 0 0 0 0 4105000 5046700 5987700 4430100 3840500 0 5727400 0 0 4438700 8088200 20952 4323 19117 175977;175978;175979;175980;175981;175982;175983;175984 140129 140129 1 GVPAGNSDTEGGQPGRK Unmodified 1625.7758 0.77576073 4976 Q9UKV3 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.06 2.49 1 1 14 2 1 1 1 1 1 1 1 1 2 1 1 2 11.307 11.027 3 0.00032947 9529 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.606 44.878 171300000 0 11823000 0 9938200 8574500 10164000 11238000 12828000 10421000 10544000 9003800 22077000 18648000 16703000 19333000 20953 4976 19118 175985;175986;175987;175988;175989;175990;175991;175992;175993;175994;175995;175996;175997;175998;175999;176000 140130;140131;140132;140133;140134;140135;140136;140137;140138 140133 8 GVPESLASGEGAGAGLPALDLAK Unmodified 2079.0848 0.084798847 702 O95865 DDAH2 N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 yes yes 0 0 0 By MS/MS 10 0 1 1 85.602 85.77 2 0.00014471 99153 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.234 41.874 5777600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5777600 20954 702 19119 176001 140139 140139 1 GVPFEVK Unmodified 774.42759 0.42759012 2205 Q12904 AIMP1 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1;Endothelial monocyte-activating polypeptide 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.817 48.976 2 0.043924 54938 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 67.035 26.114 218940000 0 0 0 8518100 8851500 16059000 14705000 11268000 14477000 19492000 27402000 26994000 16495000 17995000 36684000 20955 2205 19120 176002;176003;176004;176005;176006;176007;176008;176009;176010;176011;176012;176013 140140;140141;140142 140140 3 GVPFTLTTVDTR Unmodified 1305.6929 0.69286595 698 O95833 CLIC3 Chloride intracellular channel protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 8 1 1 1 1 1 1 1 1 77.035 77.106 2 0.0027374 89104 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 62.303 45.969 22686000 0 0 0 7307800 0 2995900 0 3619700 0 0 2004700 2432300 2098900 0 2226700 20956 698 19121 176014;176015;176016;176017;176018;176019;176020;176021 140143;140144;140145;140146 140143 4 GVPGHAVVDHRPR Unmodified 1395.7484 0.74836419 2786 Q5T8P6 RBM26 RNA-binding protein 26 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 2 1 1 17.856 18.027 3 0.0027484 15699 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.122 41.091 97291000 0 0 0 4162000 1599400 7088700 4155100 4027300 6834900 4340600 15903000 17372000 0 11975000 19833000 20957 2786 19122 176022;176023;176024;176025;176026;176027;176028;176029;176030;176031;176032;176033 140147;140148;140149;140150 140148 3 GVPGTEPEK Unmodified 912.45526 0.45526144 2964 Q6QNY0 BLOC1S3 Biogenesis of lysosome-related organelles complex 1 subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 14.217 14.432 2 0.042904 13710 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 43.808 16.321 212790000 0 0 0 8334800 0 9615500 0 10498000 7387500 16050000 31681000 36592000 19035000 25734000 47860000 20958 2964 19123 176034;176035;176036;176037;176038;176039;176040;176041;176042;176043 140151;140152;140153 140151 3 GVPHPEDDHSQVEGPESLR Unmodified 2083.9559 0.95590994 2940 Q6P996 PDXDC1 Pyridoxal-dependent decarboxylase domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.66 2.95 4 1 24 1 2 2 2 2 2 2 2 2 2 2 2 2 2 2 42.909 42.16 3;4 7.6015E-18 55414 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.974 79.221 1522200000 25600000 33044000 182610000 58911000 55454000 111600000 94170000 76144000 70068000 167550000 119270000 135060000 138770000 97011000 156920000 20959 2940 19124 176044;176045;176046;176047;176048;176049;176050;176051;176052;176053;176054;176055;176056;176057;176058;176059;176060;176061;176062;176063;176064;176065;176066;176067;176068;176069;176070;176071;176072 140154;140155;140156;140157;140158;140159;140160;140161;140162;140163;140164;140165;140166;140167;140168;140169;140170;140171;140172;140173;140174;140175;140176;140177;140178;140179;140180;140181;140182;140183 140159 23 GVPICHQTQQK Unmodified 1294.6452 0.64520425 1160 P23490 LOR Loricrin yes yes 0 0 0 By MS/MS 10 0 1 1 13.421 13.285 2 0.030899 12591 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 57.55 41.908 7047400 0 0 0 7047400 0 0 0 0 0 0 0 0 0 0 0 20960 1160 19125 176073 140184 140184 0 GVPIRLEVGPR Unmodified 1191.7088 0.70879078 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.92 62.02 3 1.1629E-05 69701 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 127.42 107.22 337750000 0 0 0 10411000 14734000 28037000 20668000 21152000 18265000 34000000 36174000 39422000 27691000 29490000 57705000 20961 848 19126 176074;176075;176076;176077;176078;176079;176080;176081;176082;176083;176084;176085 140185;140186;140187;140188;140189;140190;140191;140192;140193;140194;140195;140196 140188 11 GVPLQFDINSVGK Unmodified 1372.7351 0.73506511 3957 Q96QD9 FYTTD1 UAP56-interacting factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 81.093 80.783 2 0.00010591 93616 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 98.04 72.102 107010000 0 36168000 0 3180000 4684800 3486800 5795700 6911000 4968900 6277500 7109500 8208000 4733200 6331400 9154900 20962 3957 19127 176086;176087;176088;176089;176090;176091;176092;176093;176094;176095;176096;176097;176098 140197;140198;140199;140200;140201;140202;140203;140204;140205;140206;140207;140208;140209 140207 13 GVPNVISEDTLK Unmodified 1270.6769 0.67688153 2836 Q5W0V3 FAM160B1 Protein FAM160B1 yes yes 0 0 0 By MS/MS By MS/MS 5 3.56 1 1 1 2 1 71.407 66.247 2 0.0053148 84138 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.885 55.826 107740000 0 107740000 0 0 0 0 0 0 0 0 0 0 0 0 0 20963 2836 19128 176099;176100;176101 140210;140211;140212 140210 3 GVPPPPGPPSEPVDWNFAQK Unmodified 2115.0425 0.042540102 378 O43896 KIF1C Kinesin-like protein KIF1C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.008 82.069 3 0.046993 94758 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 21.006 12.511 67682000 0 0 0 2149100 4121200 5787600 3093000 4390500 3238900 7776600 7460500 8102500 3622600 9211600 8728100 20964 378 19129 176102;176103;176104;176105;176106;176107;176108;176109;176110;176111;176112;176113 140213 140213 1 GVPQQIEVAR Unmodified 1095.6037 0.60365701 3873 Q96I24 FUBP3 Far upstream element-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 43.9 44.114 2 0.001504 48862 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 90.657 47.533 242640000 0 0 0 0 18875000 20630000 24096000 24516000 26530000 26624000 0 22811000 27330000 0 51225000 20965 3873 19130 176114;176115;176116;176117;176118;176119;176120;176121;176122 140214;140215;140216;140217;140218;140219;140220;140221;140222;140223;140224;140225;140226;140227;140228;140229;140230 140227 17 GVPTGFILPIR Unmodified 1168.6968 0.69682911 953 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 87.876 87.946 2 0.00052464 102147 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 82.426 72.645 221020000 0 0 0 6800400 9902800 24315000 13076000 17764000 15976000 17965000 15414000 22192000 12968000 14988000 49660000 20966 953 19131 176123;176124;176125;176126;176127;176128;176129;176130;176131;176132;176133;176134 140231;140232;140233;140234;140235;140236;140237;140238;140239;140240;140241 140240 10 GVPVAEFNTETTPATNR Unmodified 1802.8799 0.87989145 4722 Q9NXA8 SIRT5 NAD-dependent protein deacylase sirtuin-5, mitochondrial yes yes 0 0 0 By MS/MS 10 0 1 1 62.264 62.836 2 0.00045027 71100 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.157 44.02 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20967 4722 19132 176135 140242 140242 1 GVPVSGQEAK Unmodified 970.50836 0.50835964 2186 Q12774;A5YM69 ARHGEF5;ARHGEF35 Rho guanine nucleotide exchange factor 5;Rho guanine nucleotide exchange factor 35 yes no 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 14.775 15.142 2 0.044606 14603 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 38.615 18.2 14935000 0 0 0 0 0 0 0 0 0 3726200 0 4022900 0 0 7185900 20968 2186 19133 176136;176137;176138 140243;140244 140244 2 GVQDLPGYYYR Unmodified 1329.6354 0.63535107 481 O75342 ALOX12B Arachidonate 12-lipoxygenase, 12R-type yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 65.135 64.879 2 0.013096 74975 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 46.891 33.8 11013000 0 0 0 8007800 0 0 0 3005200 0 0 0 0 0 0 0 20969 481 19134 176139;176140 140245 140245 1 GVQGFQDYIEK Unmodified 1282.6194 0.61936665 4762 Q9NZB2 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 65.086 65.25 2 0.00378 74912 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 63.076 48.406 43882000 0 0 0 4485700 0 0 0 0 4105400 0 4969000 8524400 5828500 6814800 9154300 20970 4762 19135 176141;176142;176143;176144;176145;176146;176147 140246;140247;140248;140249;140250 140249 5 GVQGIIVVNTEGIPIK Unmodified 1635.956 0.95595693 4542 Q9NP97 DYNLRB1 Dynein light chain roadblock-type 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 88.627 83.963 2 4.6892E-05 106253 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.803 92.699 51999000 30689000 19293000 2016800 0 0 0 0 0 0 0 0 0 0 0 0 20971 4542 19136 176148;176149;176150;176151 140251;140252;140253;140254;140255;140256 140253 5 GVQHPLR Unmodified 805.45587 0.45587056 3961 Q96QK1 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 11.099 11.206 2 0.038665 10135 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 69.39 0.99136 29837000 0 0 0 0 1616900 7936900 3619800 0 0 5051200 0 0 1744200 4836900 5031600 20972 3961 19137 176152;176153;176154;176155;176156;176157;176158 140257 140257 1 GVQLLLSER Unmodified 1013.5869 0.58694431 4114 Q9BRQ8 AIFM2 Apoptosis-inducing factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 66.032 66.225 2 0.016766 75913 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 56.258 24.969 48187000 0 0 0 0 0 0 5670700 0 6195700 0 20029000 0 8790500 7501200 0 20973 4114 19138 176159;176160;176161;176162;176163 140258 140258 1 GVQLQTHPNVDK Unmodified 1334.6943 0.69426293 1538 P48444 ARCN1 Coatomer subunit delta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.37 3.73 9 1 20 2 5 3 2 2 1 2 1 1 2 2 2 1 2 2 31.094 29.682 2;3 4.9629E-54 39763 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 211.37 155.57 2120900000 531730000 888770000 188620000 26055000 22180000 9018300 40576000 5864000 5625500 63868000 62867000 70399000 15481000 65294000 124520000 20974 1538 19139 176164;176165;176166;176167;176168;176169;176170;176171;176172;176173;176174;176175;176176;176177;176178;176179;176180;176181;176182;176183;176184;176185;176186;176187;176188;176189;176190;176191;176192;176193 140259;140260;140261;140262;140263;140264;140265;140266;140267;140268;140269;140270;140271;140272;140273;140274 140265 12 GVQLQTHPNVDKK Unmodified 1462.7892 0.78922595 1538 P48444 ARCN1 Coatomer subunit delta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 5 2 1 2 28.213 23.881 2;3 2.1225E-09 33674 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 116.55 87.819 541350000 484470000 11762000 45120000 0 0 0 0 0 0 0 0 0 0 0 0 20975 1538 19140 176194;176195;176196;176197;176198 140275;140276 140275 1 GVQPPNFSWVLPGR Unmodified 1552.815 0.81504677 4190 Q9BVJ7 DUSP23 Dual specificity protein phosphatase 23 yes yes 0 0 0 By MS/MS 10 0 1 1 89.229 89.373 2 0.0098416 103477 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.715 28.501 2048400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2048400 20976 4190 19141 176199 140277 140277 1 GVQVEEIYDLQSK Unmodified 1506.7566 0.75658842 3624 Q92560 BAP1 Ubiquitin carboxyl-terminal hydrolase BAP1 yes yes 0 0 0 By MS/MS 2 0 1 1 77.042 72.205 2 3.1613E-22 90228 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 149.23 88.713 16608000 0 16608000 0 0 0 0 0 0 0 0 0 0 0 0 0 20977 3624 19142 176200 140278 140278 1 GVQVETISPGDGR Unmodified 1313.6575 0.65754307 1932 P62942 FKBP1A Peptidyl-prolyl cis-trans isomerase FKBP1A yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 42.794 43.381 2 3.5323E-08 47978 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 106 70.391 298150000 0 0 0 0 0 0 0 0 0 0 0 61564000 0 47445000 189140000 20978 1932 19143 176201;176202;176203 140279;140280;140281 140281 3 GVQVETISPGDGRTFPK Unmodified 1786.9214 0.92136233 1932 P62942 FKBP1A Peptidyl-prolyl cis-trans isomerase FKBP1A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 1 4 1 65.348 59.785 2;3 1.1083E-18 74509 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 93.754 83.833 1011000000 152470000 267100000 591430000 0 0 0 0 0 0 0 0 0 0 0 0 20979 1932 19144 176204;176205;176206;176207;176208;176209 140282;140283;140284;140285;140286;140287;140288;140289 140289 7 GVQVETISPGDGRTFPK Acetyl (Protein N-term) 1828.9319 0.93192702 1932 P62942 FKBP1A Peptidyl-prolyl cis-trans isomerase FKBP1A yes yes 1 0 1 By MS/MS 2 0 1 1 76.532 71.694 2 1.1515E-18 89609 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.34 92.361 11924000 0 11924000 0 0 0 0 0 0 0 0 0 0 0 0 0 20980 1932 19144 176210 140290 140290 1 GVQVPAGAEAIPEPVVR Unmodified 1687.9257 0.92571943 4565 Q9NQC1 JADE2 Protein Jade-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 76.614 76.785 2 0.00027808 88701 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.881 65.136 18055000 0 0 0 0 0 0 0 0 0 4612000 5712300 7730700 0 0 0 20981 4565 19145 176211;176212;176213 140291;140292 140292 2 GVQVPASPDTVPQPSLR Unmodified 1746.9264 0.92644771 3638 Q92613 JADE3 Protein Jade-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 70.003 70.064 2 1.1605E-18 80499 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 102.62 87.721 61160000 0 0 0 2287800 2334000 3602700 0 3169800 0 11820000 9109400 14883000 3493300 3896000 6564600 20982 3638 19146 176214;176215;176216;176217;176218;176219;176220;176221;176222;176223;176224 140293;140294;140295;140296;140297;140298;140299;140300;140301;140302;140303;140304;140305;140306;140307 140305 15 GVQWMELVK Oxidation (M) 1104.5638 0.56376603 2154 Q08357 SLC20A2 Sodium-dependent phosphate transporter 2 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 2 1 1 22.187 22.196 2 0.0067689 23102 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 64.567 37.605 26340000 0 0 0 8024000 2261000 0 2881100 0 0 9109500 0 0 4064300 0 0 20983 2154 19147 176225;176226;176227;176228;176229;176230 140308;140309;140310 140308 3463 3 GVQYLNEIK Unmodified 1062.571 0.5709599 980 P13639 EEF2 Elongation factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.57 3.97 1 7 1 12 2 6 1 1 1 1 1 1 1 1 1 1 1 1 1 60.126 58.528 2 3.2492E-05 64039 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 151.27 121.93 12229000000 554080000 10227000000 244390000 44973000 29726000 46018000 43914000 41426000 35167000 67046000 143880000 129890000 53333000 122990000 445510000 20984 980 19148 176231;176232;176233;176234;176235;176236;176237;176238;176239;176240;176241;176242;176243;176244;176245;176246;176247;176248;176249;176250;176251 140311;140312;140313;140314;140315;140316;140317;140318;140319;140320;140321;140322;140323;140324;140325;140326;140327;140328;140329;140330;140331;140332;140333;140334;140335;140336;140337;140338 140337 27 GVREVTEPLNLNPAK Unmodified 1635.8944 0.8944193 3450 Q8NFW8 CMAS N-acylneuraminate cytidylyltransferase yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 67.753 60.977 2;3 2.579E-05 81758 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.345 60.822 47187000 42526000 0 4661400 0 0 0 0 0 0 0 0 0 0 0 0 20985 3450 19149 176252;176253;176254 140339;140340;140341 140340 2 GVRTLTAAAVSGAQPILSK Unmodified 1839.0578 0.057796236 421 O60664 PLIN3 Perilipin-3 yes yes 0 0 1 By MS/MS 2 0 1 1 79.31 71.18 3 1.255E-05 93490 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.794 73.366 35126000 35126000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20986 421 19150 176255 140342 140342 1 GVSAAGQVVSLK Unmodified 1114.6346 0.63462279 5258 Q9Y606 PUS1 tRNA pseudouridine synthase A, mitochondrial yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 54.822 49.474 2 3.4734E-05 64080 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.58 75.662 175980000 0 175980000 0 0 0 0 0 0 0 0 0 0 0 0 0 20987 5258 19151 176256;176257 140343;140344 140343 2 GVSAFSTWEK Unmodified 1110.5346 0.53457439 213 O14776;Q5VWI1 TCERG1;TCERG1L Transcription elongation regulator 1;Transcription elongation regulator 1-like protein yes no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61.594 60.823 2 6.5017E-05 82063 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 123.35 92.126 931010000 9897700 0 2529300 43439000 52113000 45647000 60689000 88090000 48561000 82819000 83996000 127460000 96614000 86336000 102820000 20988 213 19152 176258;176259;176260;176261;176262;176263;176264;176265;176266;176267;176268;176269;176270;176271 140345;140346;140347;140348;140349;140350;140351;140352;140353;140354;140355 140350 11 GVSASAVPFTPSSPLLSCSQEGSR Unmodified 2420.1642 0.16418815 5126 Q9Y2X7 GIT1 ARF GTPase-activating protein GIT1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 82.503 82.502 3 7.111E-18 95088 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 69.72 66.482 67044000 0 0 0 2073400 4005200 6655200 0 0 0 8722500 0 6772700 9935100 9725600 19154000 20989 5126 19153 176272;176273;176274;176275;176276;176277;176278;176279;176280;176281 140356;140357;140358;140359;140360;140361;140362;140363;140364;140365;140366;140367 140361 12 GVSAVVVGADR Unmodified 1028.5615 0.56145784 4172 Q9BV20 MRI1 Methylthioribose-1-phosphate isomerase yes yes 0 0 0 By MS/MS 10 0 1 1 39.64 39.983 2 0.047334 44821 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 35.652 12.581 22335000 0 0 0 0 0 0 0 0 0 0 0 0 22335000 0 0 20990 4172 19154 176282 140368 140368 1 GVSEAAVLKPSEELPAEATSSVEPEK Unmodified 2653.3334 0.33342155 621 O95104 SCAF4 Splicing factor, arginine/serine-rich 15 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 74.855 74.172 3 1.3809E-46 91845 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.594 87.945 626060000 0 67371000 4317100 12144000 50667000 22749000 34119000 56263000 32114000 59494000 50370000 93809000 47717000 43619000 51308000 20991 621 19155 176283;176284;176285;176286;176287;176288;176289;176290;176291;176292;176293;176294;176295;176296;176297 140369;140370;140371;140372;140373;140374;140375;140376;140377;140378;140379;140380;140381;140382;140383;140384 140372 16 GVSINQFCKEFNERTK Unmodified 1955.9523 0.95234489 5152 Q9Y3B7 MRPL11 39S ribosomal protein L11, mitochondrial yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 49.791 50.207 4 0.046546 56133 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 17.252 7.1116 1578100000 0 0 0 0 0 0 0 0 317160000 219570000 293230000 349490000 260590000 0 138060000 20992 5152 19156 176298;176299;176300;176301;176302;176303 140385 140385 1 GVSIPLMHEAMQK Unmodified 1439.7265 0.72649104 2994 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 72.687 71.75 3 0.0024039 81385 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.071 39.651 107680000 22743000 35959000 0 1643600 1723500 3674600 1548600 0 1922400 5890700 4542300 6126000 2451300 6277700 13179000 20993 2994 19157 176304;176305;176306;176307;176308;176309;176310;176311;176312;176313;176314;176315;176316 140386;140387;140388;140389;140390 140387 5 GVSLDLSNCELR Unmodified 1361.6609 0.66091389 2833 Q5VZK9 LRRC16A Leucine-rich repeat-containing protein 16A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 70.007 70.169 2 0.0030771 79755 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 72.006 63.542 40639000 0 0 0 0 3756100 0 0 0 3918700 0 8484100 9084100 5045700 3200700 7150200 20994 2833 19158 176317;176318;176319;176320;176321;176322;176323 140391;140392;140393;140394;140395 140392 5 GVSLTNHHFYDESK Unmodified 1632.7532 0.75323437 996 P14314 PRKCSH Glucosidase 2 subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 26 2 2 2 2 2 2 2 2 2 2 3 3 40.933 41.137 2;3;4 3.8862E-14 44533 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 115.25 107.66 978700000 0 0 0 22001000 13696000 47200000 56056000 43154000 43151000 46978000 129840000 89224000 61071000 91105000 335220000 20995 996 19159 176324;176325;176326;176327;176328;176329;176330;176331;176332;176333;176334;176335;176336;176337;176338;176339;176340;176341;176342;176343;176344;176345;176346;176347;176348;176349 140396;140397;140398;140399;140400;140401;140402;140403;140404;140405;140406;140407;140408;140409;140410;140411;140412;140413 140400 15 GVSPEPIHLK Unmodified 1075.6026 0.60259438 154 O00429 DNM1L Dynamin-1-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 2 2 1 1 1 1 1 1 1 1 1 1 1 1 44.545 43.115 2 0.0026685 46815 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 81.296 55.559 699630000 267170000 153240000 104780000 8603300 9319200 15341000 13159000 11284000 5459700 18242000 12784000 24928000 14179000 8680100 32461000 20996 154 19160 176350;176351;176352;176353;176354;176355;176356;176357;176358;176359;176360;176361;176362;176363;176364;176365;176366 140414;140415;140416;140417;140418;140419;140420;140421;140422;140423;140424;140425;140426;140427;140428;140429;140430;140431 140427 16 GVSQDLLER Unmodified 1015.5298 0.52982336 4356 Q9H211 CDT1 DNA replication factor Cdt1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.172 46.274 2 0.0032668 52142 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 93.143 48.748 137540000 0 0 0 13728000 11792000 15196000 12002000 17554000 8954200 15179000 16502000 0 12630000 0 14006000 20997 4356 19161 176367;176368;176369;176370;176371;176372;176373;176374;176375;176376;176377;176378 140432;140433;140434;140435;140436;140437;140438;140439;140440;140441;140442;140443 140434 12 GVSQTGTPVCEEDGDAGLGIR Unmodified 2116.9695 0.96951109 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 60.495 60.608 2 1.8527E-11 68453 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 92.935 78.677 78338000 0 0 0 2054300 3223700 0 4347700 3300100 3100100 6981500 7945300 10136000 8820700 10232000 18196000 20998 2203 19162 176379;176380;176381;176382;176383;176384;176385;176386;176387;176388;176389 140444;140445;140446;140447;140448;140449;140450 140446 5 GVSQTGTPVCEEDGDAGLGIRQGGK Unmodified 2487.166 0.16597907 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 56.826 48.645 3 0.018329 66602 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 24.645 16.255 6607000 6607000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20999 2203 19163 176390 140451 140451 1 GVSRNEDLLEVGSRPGPASQLPR Unmodified 2433.2724 0.27243347 3941 Q96P11 NSUN5 Probable 28S rRNA (cytosine-C(5))-methyltransferase yes yes 0 0 2 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 65.386 65.613 4 0.00011261 75127 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 42.904 29.716 24447000 0 0 0 0 0 6398400 0 0 5639000 0 0 0 0 0 12410000 21000 3941 19164 176391;176392;176393 140452;140453;140454 140452 3 GVSSLSIQFAK Unmodified 1135.6237 0.62372375 2833 Q5VZK9 LRRC16A Leucine-rich repeat-containing protein 16A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 70.166 70.159 2 0.0018868 81028 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 70.256 51.162 15073000 0 0 0 0 3493000 5995600 0 3842600 0 0 1741400 0 0 0 0 21001 2833 19165 176394;176395;176396;176397;176398;176399;176400;176401;176402;176403;176404 140455;140456;140457;140458;140459;140460;140461;140462;140463 140463 9 GVSTVIDAASGTFDR Unmodified 1494.7314 0.7314363 4426 Q9H6U6 BCAS3 Breast carcinoma-amplified sequence 3 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 75.766 75.64 2 0.0043077 86407 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 43.544 25.724 16028000 0 0 0 1762300 1587600 5704200 0 0 0 0 0 0 2623100 4350600 0 21002 4426 19166 176405;176406;176407;176408;176409 140464;140465;140466 140464 3 GVSVSSSTTGLPDMTGSVYNK Oxidation (M) 2101.9838 0.98376417 2779 Q5T6F2 UBAP2 Ubiquitin-associated protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 59.528 59.645 2 5.8945E-21 68014 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 93.958 88.116 63755000 0 0 0 4559200 3763100 0 7085600 6167700 6091700 5911200 6069600 6439900 5934000 6245500 5487900 21003 2779 19167 176410;176411;176412;176413;176414;176415;176416;176417;176418;176419;176420 140467;140468;140469;140470;140471;140472;140473;140474;140475;140476 140467 4419 10 GVSVSSSTTGLPDMTGSVYNK Unmodified 2085.9888 0.98884955 2779 Q5T6F2 UBAP2 Ubiquitin-associated protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 74.062 73.531 2 2.0017E-48 90169 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 173.44 163.91 188940000 0 45211000 0 0 0 0 0 21987000 0 28205000 26087000 0 21028000 13718000 32699000 21004 2779 19167 176421;176422;176423;176424;176425;176426;176427 140477;140478 140477 2 GVTCLSFSK Unmodified 997.49027 0.49026674 2658 Q2TAY7 SMU1 WD40 repeat-containing protein SMU1;WD40 repeat-containing protein SMU1, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 56.307 49.309 2 0.022521 67123 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 114.28 65.526 130830000 66975000 63860000 0 0 0 0 0 0 0 0 0 0 0 0 0 21005 2658 19168 176428;176429 140479 140479 0 GVTCVSQMPVAEGK Unmodified 1461.6956 0.69558484 4461 Q9H944 MED20 Mediator of RNA polymerase II transcription subunit 20 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 9.27 2.3 1 10 1 1 1 2 1 1 2 2 26.692 26.322 2;3 1.1447E-11 54365 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 100.69 91.728 95231000 0 58159000 0 0 1721300 0 0 5330700 1030400 0 0 0 3194500 6844400 18951000 21006 4461 19169 176430;176431;176432;176433;176434;176435;176436;176437;176438;176439;176440 140480;140481;140482;140483 140483 4 GVTEAIEK Unmodified 845.44945 0.44944778 3094 Q7Z460 CLASP1 CLIP-associating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 22.711 22.948 2 0.020609 24459 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 62.659 21.356 125800000 0 0 0 9754500 0 9914300 10965000 6704000 0 17994000 0 27023000 14746000 12280000 16421000 21007 3094 19170 176441;176442;176443;176444;176445;176446;176447;176448;176449;176450 140484;140485;140486;140487 140486 4 GVTECYECHPK Unmodified 1378.5646 0.56457067 4857 Q9UBT2 UBA2 SUMO-activating enzyme subunit 2 yes yes 0 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 3 1 22.937 19.217 2;3 0.0017712 25483 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 63.694 54.805 61567000 0 59283000 2284600 0 0 0 0 0 0 0 0 0 0 0 0 21008 4857 19171 176451;176452;176453;176454 140488;140489;140490;140491;140492 140489 5 GVTFLFPIQAK Unmodified 1219.6965 0.69649476 4588 Q9NR30 DDX21 Nucleolar RNA helicase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 88.822 88.919 2 0.00053024 102914 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.241 68.103 14608000 0 0 0 0 1605400 1664700 737120 1134700 0 1510200 1436000 0 1215500 2165100 3139200 21009 4588 19172 176455;176456;176457;176458;176459;176460;176461;176462;176463 140493;140494;140495;140496 140495 4 GVTFNVTTVDTK Unmodified 1280.6612 0.66123147 140 O00299 CLIC1 Chloride intracellular channel protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.9 3.93 1 7 3 10 3 7 1 1 1 1 1 1 1 1 1 1 1 66.755 64.852 2 7.6762E-27 76775 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 182.64 150.42 4491400000 321170000 3822800000 62257000 8129200 7429700 8285300 10213000 12891000 0 12955000 48553000 38421000 0 30444000 107880000 21010 140 19173 176464;176465;176466;176467;176468;176469;176470;176471;176472;176473;176474;176475;176476;176477;176478;176479;176480;176481;176482;176483;176484 140497;140498;140499;140500;140501;140502;140503;140504;140505;140506;140507;140508;140509;140510;140511;140512;140513;140514;140515;140516;140517;140518;140519;140520;140521;140522;140523;140524;140525;140526;140527;140528;140529;140530;140531 140527 35 GVTIIGPATVGGIK Unmodified 1281.7656 0.76563696 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.65 2.94 3 1 19 1 2 1 2 2 2 2 2 2 1 1 2 1 1 1 77.131 76.341 2;3 0.00037061 88078 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 89.548 72.035 9946200000 787110000 1139400000 32351000 162590000 409160000 564360000 1282800000 1691200000 2130300000 373050000 408710000 805460000 18705000 34722000 106330000 21011 1714 19174 176485;176486;176487;176488;176489;176490;176491;176492;176493;176494;176495;176496;176497;176498;176499;176500;176501;176502;176503;176504;176505;176506;176507 140532;140533;140534;140535;140536;140537;140538;140539;140540;140541;140542;140543;140544;140545;140546;140547;140548;140549;140550;140551;140552 140550 20 GVTIIGPATVGGIKPGCFK Unmodified 1871.0339 0.033889671 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 2 2 2 1 1 2 80.215 79.665 2;3 1.5389E-15 92410 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 106.01 95.955 264400000 18144000 0 0 3767000 10419000 0 45149000 95551000 28738000 8742500 9428800 44464000 0 0 0 21012 1714 19175 176508;176509;176510;176511;176512;176513;176514;176515;176516;176517;176518;176519;176520 140553;140554;140555;140556;140557;140558;140559;140560;140561;140562;140563;140564 140562 12 GVTIKPTVDDD Unmodified 1158.5768 0.57683314 1427 P41091;Q2VIR3 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein yes no 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 40.407 40.535 2 3.3203E-12 44678 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 140.83 116.06 145180000 0 0 0 8887600 7484700 11628000 13930000 10511000 9633700 15839000 20839000 15864000 14997000 15561000 0 21013 1427 19176 176521;176522;176523;176524;176525;176526;176527;176528;176529;176530;176531 140565;140566;140567;140568;140569;140570 140569 1 GVTIPYRPK Unmodified 1029.5971 0.59711507 2521 Q15366 PCBP2 Poly(rC)-binding protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.828 43.003 2 0.038581 46875 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.59 82.962 1760000000 0 0 0 93608000 58396000 147250000 125170000 106650000 93291000 148600000 180750000 184020000 183830000 135410000 303030000 21014 2521 19177 176532;176533;176534;176535;176536;176537;176538;176539;176540;176541;176542;176543 140571 140571 0 GVTMVSPSTAGGPAQK Oxidation (M) 1502.7399 0.73989249 3112 Q7Z6J0 SH3RF1 E3 ubiquitin-protein ligase SH3RF1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.368 30.557 2 2.0049E-27 32949 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 126.19 111.52 72580000 0 0 0 3803900 4147700 5344500 5157400 4429300 6206000 6461800 6415500 8457500 7558400 6845000 7753500 21015 3112 19178 176544;176545;176546;176547;176548;176549;176550;176551;176552;176553;176554;176555 140572;140573;140574;140575;140576;140577;140578;140579;140580;140581;140582;140583 140580 4718 12 GVTMVSPSTAGGPAQK Unmodified 1486.745 0.74497787 3112 Q7Z6J0 SH3RF1 E3 ubiquitin-protein ligase SH3RF1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 42.876 42.745 2 5.2595E-07 48146 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 105.86 69.17 31007000 0 0 0 4786500 4797900 6978500 7291300 0 0 0 0 0 0 7153000 0 21016 3112 19178 176556;176557;176558;176559;176560 140584;140585;140586;140587;140588 140588 5 GVTPAGFPK Unmodified 872.4756 0.47560295 3581 Q8WX93 PALLD Palladin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 43.733 43.519 2 0.0056908 49060 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 77.058 57.211 503520000 0 13425000 0 29071000 27250000 35653000 37074000 31471000 36936000 38319000 50195000 48841000 31471000 45440000 78379000 21017 3581 19179 176561;176562;176563;176564;176565;176566;176567;176568;176569;176570;176571;176572;176573 140589;140590;140591;140592;140593;140594;140595;140596;140597;140598;140599;140600;140601;140602;140603 140589 13 GVTQFGNK Unmodified 849.43447 0.43446642 369 O43809 NUDT21 Cleavage and polyadenylation specificity factor subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 18.55 18.722 2 0.0048543 18656 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 114.02 75.652 1131000000 0 0 0 78674000 88640000 77417000 115730000 87788000 79986000 126050000 114970000 168980000 0 0 192790000 21018 369 19180 176574;176575;176576;176577;176578;176579;176580;176581;176582;176583 140604;140605;140606;140607;140608;140609;140610;140611;140612;140613;140614 140608 11 GVTQIDNDLK Unmodified 1101.5666 0.5666028 1122 P21283 ATP6V1C1 V-type proton ATPase subunit C 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.24 2 1 10 1 2 1 1 1 1 1 1 1 1 1 1 42.181 41.018 2 9.0268E-13 51968 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 182.53 107.42 796120000 8898800 680660000 0 0 3882700 12066000 9045400 4729500 0 12662000 12064000 15887000 7361700 8068500 20802000 21019 1122 19181 176584;176585;176586;176587;176588;176589;176590;176591;176592;176593;176594;176595;176596 140615;140616;140617;140618;140619;140620;140621;140622;140623;140624;140625;140626;140627;140628;140629;140630 140619 15 GVTQVTTQPK Unmodified 1057.5768 0.57677356 450 O60942 RNGTT mRNA-capping enzyme;Polynucleotide 5'-triphosphatase;mRNA guanylyltransferase yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 19.454 19.571 2 1.7948E-06 18619 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 133.23 64.61 309490000 0 0 0 18740000 21670000 26131000 30490000 31022000 21214000 35757000 47970000 0 38929000 37563000 0 21020 450 19182 176597;176598;176599;176600;176601;176602;176603;176604;176605;176606 140631;140632;140633;140634;140635;140636;140637;140638 140636 2 GVTQYYAYVTER Unmodified 1448.6936 0.69359423 1199 P26196 DDX6 Probable ATP-dependent RNA helicase DDX6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.392 70.467 2 0.0007538 81424 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 90.05 72.231 98843000 0 0 0 4399500 6509500 5165200 4585900 7135000 4365100 10030000 8597800 9145900 7536900 7528400 23844000 21021 1199 19183 176607;176608;176609;176610;176611;176612;176613;176614;176615;176616;176617;176618 140639;140640;140641;140642;140643;140644 140644 5 GVTSAVNIMHSSLQQGK Unmodified 1755.8938 0.89376737 4471 Q9H9E3 COG4 Conserved oligomeric Golgi complex subunit 4 yes yes 0 0 0 By MS/MS 10 0 1 1 61.569 62.149 3 0.024695 70303 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 28.549 21.016 4247300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4247300 21022 4471 19184 176619 140645 140645 1 GVTSEEFDK Unmodified 1010.4557 0.45565537 431 O60784 TOM1 Target of Myb protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 26.084 26.333 2 0.0084462 27872 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 69.598 50.867 48808000 0 0 0 4609100 2921500 0 0 3517300 0 5062700 5852300 8092100 5524400 5599500 7629100 21023 431 19185 176620;176621;176622;176623;176624;176625;176626;176627;176628 140646;140647;140648;140649;140650;140651 140648 6 GVTSILPVLR Unmodified 1053.6546 0.65462995 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 83.561 83.625 2 1.4683E-09 97034 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 140.09 104.79 503410000 0 0 0 11977000 16660000 41492000 33605000 39797000 39078000 57341000 45022000 58165000 36745000 50086000 73443000 21024 3641 19186 176629;176630;176631;176632;176633;176634;176635;176636;176637;176638;176639;176640 140652;140653;140654;140655;140656;140657;140658;140659;140660;140661 140661 8 GVTVGEGVR Unmodified 872.47158 0.4715802 3878 Q96IJ6 GMPPA Mannose-1-phosphate guanyltransferase alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 13 2 1 1 1 1 1 1 1 1 1 1 1 24.477 24.652 2 0.0071283 26612 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 73.248 33.145 83652000 0 0 0 7463900 5435000 9062100 5474500 5836200 0 6429400 6583200 7582100 8896900 8571900 12316000 21025 3878 19187 176641;176642;176643;176644;176645;176646;176647;176648;176649;176650;176651;176652;176653 140662;140663;140664;140665;140666;140667;140668;140669;140670;140671;140672 140662 11 GVVDLTQEAR Unmodified 1086.5669 0.56693715 284 O15417 TNRC18 Trinucleotide repeat-containing gene 18 protein yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching 10 0 6 1 1 1 1 1 1 46.701 46.819 2 0.037846 52736 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 40.724 23.484 17845000 0 0 0 0 2232300 0 2398100 0 2091900 0 3177100 0 4268200 3677300 0 21026 284 19188 176654;176655;176656;176657;176658;176659 140673 140673 1 GVVDSDDLPLNVSR Unmodified 1484.7471 0.74708636 1002 P14625 HSP90B1 Endoplasmin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.73 2.89 5 1 31 2 2 2 2 2 3 4 2 1 3 2 3 3 3 3 74.313 73.861 2 2.5133E-61 83538 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 183.99 157.31 1235500000 14218000 126110000 4134600 37373000 45799000 150360000 70433000 49820000 47656000 103750000 125460000 95044000 67367000 88465000 209550000 21027 1002 19189 176660;176661;176662;176663;176664;176665;176666;176667;176668;176669;176670;176671;176672;176673;176674;176675;176676;176677;176678;176679;176680;176681;176682;176683;176684;176685;176686;176687;176688;176689;176690;176691;176692;176693;176694;176695;176696 140674;140675;140676;140677;140678;140679;140680;140681;140682;140683;140684;140685;140686;140687;140688;140689;140690;140691;140692;140693;140694;140695;140696;140697;140698;140699;140700;140701;140702;140703;140704;140705;140706;140707;140708;140709;140710;140711;140712;140713;140714;140715;140716;140717;140718;140719;140720 140708 46 GVVDSDDLPLNVSRETLQQHK Unmodified 2349.1925 0.19245182 1002 P14625 HSP90B1 Endoplasmin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.4 0.49 6 4 4 4 2 78.094 73.504 3;4 7.9357E-09 96728 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.203 55.643 2158800000 1352600000 576720000 229440000 0 0 0 0 0 0 0 0 0 0 0 0 21028 1002 19190 176697;176698;176699;176700;176701;176702;176703;176704;176705;176706 140721;140722;140723;140724;140725;140726;140727;140728;140729;140730;140731;140732 140728 9 GVVDSEDLPLNISR Unmodified 1512.7784 0.77838649 862;850 P07900;P08238 HSP90AA1;HSP90AB1 Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 40 3 3 3 4 3 4 3 3 4 3 4 3 78.138 78.205 2;3 2.4423E-85 89614 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 193.28 0 30146000000 0 0 0 1036700000 1100200000 2897500000 1520300000 1700100000 1086800000 3127100000 3702700000 2832400000 1864500000 2781700000 6495800000 21029 850;862 19191 176707;176708;176709;176710;176711;176712;176713;176714;176715;176716;176717;176718;176719;176720;176721;176722;176723;176724;176725;176726;176727;176728;176729;176730;176731;176732;176733;176734;176735;176736;176737;176738;176739;176740;176741;176742;176743;176744;176745;176746 140733;140734;140735;140736;140737;140738;140739;140740;140741;140742;140743;140744;140745;140746;140747;140748;140749;140750;140751;140752;140753;140754;140755;140756;140757;140758;140759;140760;140761;140762;140763;140764;140765;140766;140767;140768;140769;140770;140771;140772;140773;140774;140775;140776;140777;140778;140779;140780 140736 38 GVVDSEDLPLNISREMLQQSK Oxidation (M) 2373.1846 0.18458925 862;850 P07900;P08238 HSP90AA1;HSP90AB1 Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta no no 0 1 1 By MS/MS By MS/MS 10 0 2 1 1 77.629 77.81 3 1.2448E-06 89482 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.302 59.639 20676000 0 0 0 0 0 0 0 0 0 8369400 0 0 0 0 12307000 21030 850;862 19192 176747;176748 140781;140782 140782 1068 1 GVVENYNDEEVSIR Unmodified 1621.7584 0.75837933 584 O94782 USP1 Ubiquitin carboxyl-terminal hydrolase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 56.125 56.131 2 5.0468E-11 63204 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 105.46 91.302 32360000 0 0 0 3297600 2197400 3881900 3439200 3418600 2328600 4465400 4323400 0 0 5007900 0 21031 584 19193 176749;176750;176751;176752;176753;176754;176755;176756;176757;176758 140783;140784;140785;140786;140787;140788;140789 140785 7 GVVEVTHDLQK Unmodified 1223.651 0.65100113 1624 P50454 SERPINH1 Serpin H1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.19 3.8 1 8 2 20 4 5 2 2 1 2 1 2 1 1 2 2 2 2 2 42.911 41.588 2;3 2.0889E-09 95120 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 143.7 110.89 5160600000 301830000 1500000000 2164200000 45727000 22238000 58491000 39532000 62596000 27700000 39790000 208670000 178580000 96255000 110820000 304150000 21032 1624 19194 176759;176760;176761;176762;176763;176764;176765;176766;176767;176768;176769;176770;176771;176772;176773;176774;176775;176776;176777;176778;176779;176780;176781;176782;176783;176784;176785;176786;176787;176788;176789 140790;140791;140792;140793;140794;140795;140796;140797;140798;140799;140800;140801;140802;140803;140804;140805;140806;140807;140808;140809;140810;140811;140812;140813;140814;140815 140802 16 GVVFDVTSGK Unmodified 1007.5288 0.52876073 5020 Q9UMX5 NENF Neudesin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 6.56 3.86 3 1 5 1 2 1 1 1 1 1 1 56.222 53.927 2 0.0025034 69158 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.06 78.163 445150000 23886000 279180000 79877000 0 0 0 0 0 0 1802100 12347000 14138000 0 9368800 24549000 21033 5020 19195 176790;176791;176792;176793;176794;176795;176796;176797;176798 140816;140817;140818;140819;140820;140821;140822;140823 140816 5 GVVFSVTTVDLK Unmodified 1263.7075 0.70745338 5270 Q9Y696 CLIC4 Chloride intracellular channel protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.5 0.5 2 2 2 1 1 85.108 80.747 2 3.8935E-06 102925 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 112.75 91.153 181340000 125810000 32514000 23015000 0 0 0 0 0 0 0 0 0 0 0 0 21034 5270 19196 176799;176800;176801;176802 140824;140825;140826;140827;140828 140827 5 GVVGGVTGIITK Unmodified 1099.6601 0.66010926 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 65.937 66.122 2 0.0039224 75875 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 59.067 37.108 56747000 0 0 0 0 0 7730700 3389300 3741100 4619800 6442700 8215300 11136000 6094600 5377100 0 21035 3023 19197 176803;176804;176805;176806;176807;176808;176809;176810;176811 140829;140830;140831;140832;140833;140834;140835;140836;140837 140829 9 GVVGGVTGIITKPVEGAK Unmodified 1680.9774 0.97742065 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 70.778 70.995 3 0.0068102 81703 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 31.462 26.752 32866000 0 0 0 0 0 0 2884500 2662000 2460300 3604700 2826200 6588800 4181900 2608300 5048900 21036 3023 19198 176812;176813;176814;176815;176816;176817;176818;176819;176820 140838;140839;140840 140838 2 GVVGPELYGR Unmodified 1045.5556 0.55564418 1802 P58107 EPPK1 Epiplakin yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 53.186 52.598 2 0.039399 60345 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 40.239 19.54 10661000 0 0 0 5864000 4797000 0 0 0 0 0 0 0 0 0 0 21037 1802 19199 176821;176822 140841;140842 140841 2 GVVGPGPAAIAALGGGGAGPPVVGGGGGR Unmodified 2281.2291 0.22911209 1132 P22059 OSBP Oxysterol-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 85.986 86.053 3 9.6088E-37 99642 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.387 82.243 93465000 0 0 0 2428000 5605700 8721200 4831900 6324100 3779500 10863000 11527000 10763000 5936900 6111900 16573000 21038 1132 19200 176823;176824;176825;176826;176827;176828;176829;176830;176831;176832;176833;176834 140843;140844;140845;140846;140847;140848;140849;140850;140851;140852;140853;140854;140855;140856 140848 14 GVVHDDMECSHYMK Oxidation (M) 1722.68 0.68001113 1631 P50579 METAP2 Methionine aminopeptidase 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 5 2 1 2 28.366 24.056 3 0.0023661 32721 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 55.896 51.047 96789000 27016000 18139000 51634000 0 0 0 0 0 0 0 0 0 0 0 0 21039 1631 19201 176835;176836;176837;176838;176839 140857;140858 140857 2623;2624 1 GVVHDDMECSHYMK Unmodified 1706.6851 0.68509651 1631 P50579 METAP2 Methionine aminopeptidase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.67 3.77 6 3 2 2 2 1 1 1 37.571 34.367 3;4 6.0895E-30 46122 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.97 120.44 154390000 38337000 63436000 19665000 0 0 0 0 0 0 0 11897000 0 0 12213000 8845900 21040 1631 19201 176840;176841;176842;176843;176844;176845;176846;176847;176848 140859;140860;140861;140862;140863;140864 140859 6 GVVHDDMECSHYMK 2 Oxidation (M) 1738.6749 0.67492575 1631 P50579 METAP2 Methionine aminopeptidase 2 yes yes 0 2 0 By MS/MS By MS/MS 2 0 2 1 1 17.477 13.985 3 0.00013512 17610 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 95.417 95.417 50041000 12270000 0 37771000 0 0 0 0 0 0 0 0 0 0 0 0 21041 1631 19201 176849;176850 140865;140866 140866 2623;2624 1 GVVIGTGENSEFGEVFK Unmodified 1767.8679 0.86792978 2027 P98194 ATP2C1 Calcium-transporting ATPase type 2C member 1 yes yes 0 0 0 By MS/MS 3 0 1 1 84.75 81.516 2 0.00031639 97718 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 93.959 86.072 3691800 0 3691800 0 0 0 0 0 0 0 0 0 0 0 0 0 21042 2027 19202 176851 140867 140867 1 GVVMHTFGGYANSK Unmodified 1466.6976 0.69763375 2984 Q6UXN9 WDR82 WD repeat-containing protein 82 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 1 2 2 1 2 1 1 2 1 2 47.279 47.491 2;3 0.0010716 52400 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.344 47.991 100830000 0 0 0 2952400 3204300 5711200 5700200 5986600 5321400 6121400 8400100 15931000 0 7188000 34310000 21043 2984 19203 176852;176853;176854;176855;176856;176857;176858;176859;176860;176861;176862;176863;176864;176865;176866;176867 140868;140869;140870;140871;140872;140873 140870 6 GVVPFQAGSR Unmodified 1016.5403 0.54032847 3073 Q7Z2W4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 48.816 49.127 2 0.0060165 54919 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 66.621 27.649 84187000 0 0 0 0 0 0 11437000 15742000 0 14474000 17265000 25270000 0 0 0 21044 3073 19204 176868;176869;176870;176871;176872;176873;176874 140874;140875;140876;140877;140878 140878 5 GVVPGGGLK Unmodified 782.46504 0.46503826 547 O75822 EIF3J Eukaryotic translation initiation factor 3 subunit J yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.36 2.01 1 10 1 1 1 1 1 1 1 1 1 1 1 33.71 33.514 2 0.012852 41535 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 83.614 39.003 335840000 0 106820000 0 14518000 0 12101000 13608000 0 9233700 20843000 33885000 27042000 22692000 29830000 45259000 21045 547 19205 176875;176876;176877;176878;176879;176880;176881;176882;176883;176884;176885 140879;140880;140881;140882;140883 140881 3 GVVPLAGTDGETTTQGLDGLSER Unmodified 2272.1183 0.11828382 897 P09972 ALDOC Fructose-bisphosphate aldolase C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.78 2.86 8 1 49 2 5 2 4 4 4 4 4 4 4 4 5 4 4 4 79 78.286 2;3 7.7227E-102 95751 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 195.6 187 3562300000 45798000 1555700000 8605400 72193000 38897000 55733000 54448000 69282000 39937000 74945000 274870000 231370000 46682000 239600000 754280000 21046 897 19206 176886;176887;176888;176889;176890;176891;176892;176893;176894;176895;176896;176897;176898;176899;176900;176901;176902;176903;176904;176905;176906;176907;176908;176909;176910;176911;176912;176913;176914;176915;176916;176917;176918;176919;176920;176921;176922;176923;176924;176925;176926;176927;176928;176929;176930;176931;176932;176933;176934;176935;176936;176937;176938;176939;176940;176941;176942;176943 140884;140885;140886;140887;140888;140889;140890;140891;140892;140893;140894;140895;140896;140897;140898;140899;140900;140901;140902;140903;140904;140905;140906;140907;140908;140909;140910;140911;140912;140913;140914;140915;140916;140917;140918;140919 140891 32 GVVPLAGTDGETTTQGLDGLSERCAQYK Unmodified 2922.4029 0.40291488 897 P09972 ALDOC Fructose-bisphosphate aldolase C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.11 0.314 8 1 2 4 3 78.763 74.12 3;4 4.9904E-191 94210 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 205.73 198.53 2263100000 308280000 1709600000 245150000 0 0 0 0 0 0 0 0 0 0 0 0 21047 897 19207 176944;176945;176946;176947;176948;176949;176950;176951;176952 140920;140921;140922;140923;140924;140925;140926;140927;140928;140929 140921 10 GVVPLAGTNGETTTQGLDGLSER Unmodified 2271.1343 0.13426824 771 P04075 ALDOA Fructose-bisphosphate aldolase A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 6 2 22 2 6 2 2 2 2 2 1 2 2 2 2 2 1 77.788 76.608 2;3 5.0399E-102 94304 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 216.71 209.34 4335200000 47631000 966960000 0 141180000 72090000 89464000 101610000 125190000 44294000 145100000 540430000 472650000 82599000 487330000 1018700000 21048 771 19208 176953;176954;176955;176956;176957;176958;176959;176960;176961;176962;176963;176964;176965;176966;176967;176968;176969;176970;176971;176972;176973;176974;176975;176976;176977;176978;176979;176980;176981;176982 140930;140931;140932;140933;140934;140935;140936;140937;140938;140939;140940;140941;140942;140943;140944;140945;140946;140947;140948;140949;140950;140951;140952;140953;140954;140955 140938 21 GVVPLAGTNGETTTQGLDGLSERCAQYK Unmodified 2921.4189 0.41889929 771 P04075 ALDOA Fructose-bisphosphate aldolase A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.2 0.4 8 2 2 4 4 77.767 73.411 3;4 3.8355E-121 94552 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.01 99.303 1912100000 405450000 307200000 1199400000 0 0 0 0 0 0 0 0 0 0 0 0 21049 771 19209 176983;176984;176985;176986;176987;176988;176989;176990;176991;176992 140956;140957;140958;140959;140960;140961;140962;140963;140964;140965;140966 140960 11 GVVPLAGTNGETTTQGLDGLSERCAQYKK Unmodified 3049.5139 0.51386231 771 P04075 ALDOA Fructose-bisphosphate aldolase A yes yes 0 0 2 By MS/MS 2 0 2 2 77.363 69.232 3;4 7.6021E-35 91342 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.441 94.867 119440000 119440000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21050 771 19210 176993;176994 140967;140968 140968 2 GVVQELQQAISK Unmodified 1298.7194 0.71941505 1255 P29692 EEF1D Elongation factor 1-delta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.638 81.699 2 6.0644E-43 94384 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 178.22 134.49 718690000 0 0 0 4466500 14403000 34828000 15589000 32212000 21729000 65099000 77932000 68474000 21899000 68422000 293640000 21051 1255 19211 176995;176996;176997;176998;176999;177000;177001;177002;177003;177004;177005;177006 140969;140970;140971;140972;140973;140974;140975;140976;140977;140978;140979;140980;140981;140982 140972 14 GVVQLFNAVQK Unmodified 1201.6819 0.68190733 5154 Q9Y3B9 RRP15 RRP15-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.651 77.708 2 8.5241E-07 89659 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 144.38 111.53 160070000 0 0 0 8866600 7305100 13292000 9777600 13966000 9239800 15997000 17588000 18451000 10706000 9349600 25529000 21052 5154 19212 177007;177008;177009;177010;177011;177012;177013;177014;177015;177016;177017;177018 140983;140984;140985;140986;140987;140988;140989;140990;140991;140992;140993;140994 140985 12 GVVSLSQELSSPEQK Unmodified 1586.8152 0.81516593 126 O00189 AP4M1 AP-4 complex subunit mu-1 yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS 10 0 6 1 1 1 1 2 65.464 65.592 2 0.012851 75167 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 44.564 23.786 14869000 0 0 0 0 1674000 0 0 2562300 0 0 2844700 5415100 0 2372600 0 21053 126 19213 177019;177020;177021;177022;177023;177024 140995;140996 140995 2 GVVSLVAVHPSTVNPLGK Unmodified 1773.0149 0.014868788 2387 Q14186 TFDP1 Transcription factor Dp-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 78.327 78.471 3 2.1885E-05 90227 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.299 58.255 96575000 0 0 0 0 0 8879700 5330400 8329200 5473000 12148000 7929500 12254000 5207100 6007200 25016000 21054 2387 19214 177025;177026;177027;177028;177029;177030;177031;177032;177033;177034 140997;140998;140999;141000;141001;141002;141003;141004;141005 140999 9 GVVTAEMFR Unmodified 1008.5063 0.50625115 3326 Q8N3U4 STAG2 Cohesin subunit SA-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 61.303 61.311 2 0.011394 69858 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 62.88 33.504 34981000 0 0 0 0 6068900 0 0 14404000 0 0 14508000 0 0 0 0 21055 3326 19215 177035;177036;177037 141006;141007 141006 2 GVVVAGQSQAGAR Unmodified 1198.6418 0.64183343 900 P0C7T5 ATXN1L Ataxin-1-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 21.942 22.147 2 6.3548E-08 22043 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.48 78.24 51090000 0 0 0 3880600 2479600 0 4976200 5269300 0 5261800 0 7355900 7592800 5501500 8772200 21056 900 19216 177038;177039;177040;177041;177042;177043;177044;177045;177046;177047 141008;141009;141010;141011;141012;141013;141014;141015;141016;141017 141010 10 GVWGTPGQVYDVEEVDVK Unmodified 1975.9527 0.95272204 2696 Q53EL6 PDCD4 Programmed cell death protein 4 yes yes 0 0 0 By MS/MS 2.67 0.471 1 2 3 84.345 80.348 2 0.00010913 99911 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.879 56.491 44061000 0 44061000 0 0 0 0 0 0 0 0 0 0 0 0 0 21057 2696 19217 177048;177049;177050 141018;141019 141018 2 GVWSELSK Unmodified 904.46543 0.46543219 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55.12 54.036 2 0.0083611 59919 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 86.472 41.751 579300000 242820000 7003000 61650000 11827000 16863000 24232000 18345000 22595000 17305000 22400000 26887000 25096000 19988000 26906000 35382000 21058 2392 19218 177051;177052;177053;177054;177055;177056;177057;177058;177059;177060;177061;177062;177063;177064;177065 141020;141021;141022;141023;141024;141025;141026;141027;141028;141029;141030;141031;141032 141030 13 GVWSTLPVNEK Unmodified 1228.6452 0.64518747 3926 Q96MU7 YTHDC1 YTH domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.08 3.33 2 1 9 2 1 1 1 1 1 1 1 1 1 1 75.097 74.162 2 0.0009842 84548 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 92.838 85.27 74670000 0 43501000 4219600 0 1854000 2967800 2245700 2675700 0 2767500 2469900 5302600 3684400 2981200 0 21059 3926 19219 177066;177067;177068;177069;177070;177071;177072;177073;177074;177075;177076;177077 141033;141034;141035;141036 141034 4 GVYPDLLATSGDYLR Unmodified 1638.8253 0.82533668 1864 P61962 DCAF7 DDB1- and CUL4-associated factor 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 86.215 86.323 2 2.2502E-08 99794 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.313 82.309 65879000 0 0 0 0 2039000 3592900 2405500 5171400 4332800 6328900 6560000 6910500 2268000 5056400 21213000 21060 1864 19220 177078;177079;177080;177081;177082;177083;177084;177085;177086;177087;177088 141037;141038;141039;141040;141041;141042;141043;141044;141045;141046;141047 141040 11 GVYSSTNELTTDSTPK Unmodified 1698.7948 0.79482442 454 O75113 N4BP1 NEDD4-binding protein 1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS 8 3.46 1 3 1 1 1 1 46.255 45.067 2 1.2014E-23 57036 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 156.14 142.23 54453000 0 41684000 0 0 0 2741500 0 0 0 4662000 0 0 0 0 5365700 21061 454 19221 177089;177090;177091;177092 141048;141049;141050 141049 2 GWALYCAGK Unmodified 1024.48 0.4800364 1352 P35270 SPR Sepiapterin reductase yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching 8 3.46 2 6 1 1 1 1 1 1 1 1 60.405 59.106 2 0.019171 66958 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 54.205 39.268 48190000 25565000 0 3249200 0 0 0 1252500 3693600 0 0 3583700 0 3601900 3277100 3966700 21062 1352 19222 177093;177094;177095;177096;177097;177098;177099;177100 141051;141052;141053;141054;141055 141054 5 GWAPVFLDR Unmodified 1059.5502 0.55016488 5255 Q9Y5Y2 NUBP2 Cytosolic Fe-S cluster assembly factor NUBP2 yes yes 0 0 0 By MS/MS 10 0 1 1 82.196 82.398 2 0.036919 94703 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.489 35.075 140440000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 140440000 21063 5255 19223 177101 141056 141056 1 GWDAEGSPFR Unmodified 1120.4938 0.49377221 3225 Q8IVD9 NUDCD3 NudC domain-containing protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 58.701 58.966 2 0.0021994 66724 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 85.666 69.512 34693000 0 0 0 0 0 3494900 2148000 2693000 0 4040600 3353000 3823700 5139800 3415800 6583700 21064 3225 19224 177102;177103;177104;177105;177106;177107;177108;177109;177110 141057;141058;141059;141060;141061;141062;141063;141064 141064 8 GWDDLFNK Unmodified 993.4556 0.45559579 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.699 76.746 2 0.045991 87997 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.346 37.277 46942000 0 0 0 1762200 1902700 4247800 3079200 4096800 2465900 5581000 0 5371900 3520300 4850600 10064000 21065 2392 19225 177111;177112;177113;177114;177115;177116;177117;177118;177119;177120;177121 141065;141066 141066 2 GWDLTVK Unmodified 817.4334 0.43340378 801 P05161 ISG15 Ubiquitin-like protein ISG15 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 66.385 59.279 2 0.025641 76100 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.919 82.358 84885000 7216600 77668000 0 0 0 0 0 0 0 0 0 0 0 0 0 21066 801 19226 177122;177123 141067 141067 1 GWDQGLLGMCEGEK Oxidation (M) 1594.6756 0.67557768 1212 P26885 FKBP2 Peptidyl-prolyl cis-trans isomerase FKBP2 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 72.449 67.413 2 0.011582 85580 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.358 68.629 48312000 0 48312000 0 0 0 0 0 0 0 0 0 0 0 0 0 21067 1212 19227 177124;177125 141068 141068 1779 0 GWDQGLLGMCEGEK Unmodified 1578.6807 0.68066306 1212 P26885 FKBP2 Peptidyl-prolyl cis-trans isomerase FKBP2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 81.459 77.457 2 1.9608E-28 96133 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 157.68 151.29 54705000 0 54705000 0 0 0 0 0 0 0 0 0 0 0 0 0 21068 1212 19227 177126;177127 141069;141070 141069 0 GWEAFLNAPEANR Unmodified 1473.7001 0.70007659 360 O43719 HTATSF1 HIV Tat-specific factor 1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 81.453 81.602 2 4.3356E-08 94049 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 104.52 91.946 29145000 0 0 0 0 0 0 0 2166900 0 0 0 4187900 3023600 5082400 14684000 21069 360 19228 177128;177129;177130;177131;177132 141071;141072;141073 141071 3 GWEDGMLGMK Oxidation (M) 1138.4787 0.47871577 2768 Q5T1M5 FKBP15 FK506-binding protein 15 yes yes 0 1 0 By MS/MS 2 0 1 1 65.284 59.367 2 0.022856 75957 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.59 49.23 18783000 0 18783000 0 0 0 0 0 0 0 0 0 0 0 0 0 21070 2768 19229 177133 141074 141074 1 GWEDGMLGMK Unmodified 1122.4838 0.48380115 2768 Q5T1M5 FKBP15 FK506-binding protein 15 yes yes 0 0 0 By MS/MS 2 0 1 1 78.701 73.965 2 0.026306 92165 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.59 49.717 14666000 0 14666000 0 0 0 0 0 0 0 0 0 0 0 0 0 21071 2768 19229 177134 141075 141075 1 GWEEGVAQMSVGQR Unmodified 1532.7042 0.70417569 1932 P62942 FKBP1A Peptidyl-prolyl cis-trans isomerase FKBP1A yes yes 0 0 0 By MS/MS 10 0 1 1 66.255 66.792 2 0.00045769 75896 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.596 75.98 7990500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7990500 21072 1932 19230 177135 141076 141076 1 GWENHVEGQK Unmodified 1182.5418 0.54178503 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.74 2.92 3 16 1 1 1 1 1 1 1 2 2 1 2 2 1 2 21.048 20.549 2;3 0.00089345 20774 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 114.97 74.7 520290000 4075100 60552000 136730000 13226000 17069000 38599000 24246000 21052000 20802000 21784000 39619000 54828000 0 26239000 41464000 21073 2392 19231 177136;177137;177138;177139;177140;177141;177142;177143;177144;177145;177146;177147;177148;177149;177150;177151;177152;177153;177154 141077;141078;141079;141080;141081;141082;141083;141084;141085 141084 8 GWGPDYPRQSIK Unmodified 1402.6993 0.69934831 2298 Q13485 SMAD4 Mothers against decapentaplegic homolog 4 yes yes 0 0 1 By MS/MS 2 0 1 1 56.861 48.68 3 0.037308 66408 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.979 29.65 35962000 35962000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21074 2298 19232 177155 141086 141086 0 GWLDQEDQEAPLQK Unmodified 1655.7791 0.77911477 3238 Q8IWC1 MAP7D3 MAP7 domain-containing protein 3 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 67.122 67.347 2 2.8803E-06 76630 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.616 84.929 13495000 0 0 0 0 0 0 0 0 1538400 4552900 0 4417300 0 2986500 0 21075 3238 19233 177156;177157;177158;177159;177160 141087;141088;141089 141088 3 GWLRDPSASPGDAGEQAIR Unmodified 1981.9606 0.96060139 1073 P18206 VCL Vinculin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 60.046 60.147 3 1.3676E-13 67808 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.45 90.92 210460000 0 0 0 7596000 2848500 28761000 5131300 0 8708400 17749000 21858000 22249000 12993000 22537000 60033000 21076 1073 19234 177161;177162;177163;177164;177165;177166;177167;177168;177169;177170;177171 141090;141091;141092;141093;141094;141095 141092 2 GWNWGTVK Unmodified 946.4661 0.4661009 2163 Q08945 SSRP1 FACT complex subunit SSRP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 63.359 62.491 2 0.013529 71463 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 72.138 38.4 117780000 42591000 0 6440800 3608900 2293000 4713000 4676800 4227000 4617800 5798600 9224300 0 8937800 6318600 14335000 21077 2163 19235 177172;177173;177174;177175;177176;177177;177178;177179;177180;177181;177182;177183;177184 141096;141097;141098;141099;141100;141101;141102;141103;141104 141102 9 GWNYILEK Unmodified 1021.5233 0.52328142 1481 P43490 NAMPT Nicotinamide phosphoribosyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 70.762 70.205 2 0.010456 80792 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 79.597 60.866 380700000 317500000 0 0 0 0 3889600 4612600 3574700 3251400 4212900 6912700 6459900 7542900 7477500 15260000 21078 1481 19236 177185;177186;177187;177188;177189;177190;177191;177192;177193;177194;177195 141105;141106;141107;141108;141109;141110;141111;141112;141113 141105 9 GWPLYLSTK Unmodified 1063.5702 0.57023162 552 O75874 IDH1 Isocitrate dehydrogenase [NADP] cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 79.013 78.43 2 0.013982 89899 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.981 43.482 252550000 0 115040000 21181000 5921400 0 0 1347300 0 1642800 2545800 14164000 10294000 2806100 13798000 63817000 21079 552 19237 177196;177197;177198;177199;177200;177201;177202;177203;177204;177205;177206 141114;141115;141116;141117;141118;141119 141115 6 GWQDVTATSAYK Unmodified 1325.6252 0.62518031 1768 P55327 TPD52 Tumor protein D52 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 55.324 54.431 2 1.8389E-08 61911 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 135.86 123.81 2774000000 20008000 1299500000 0 91767000 73277000 77810000 62917000 104330000 75806000 160850000 189310000 194570000 119710000 116080000 188070000 21080 1768 19238 177207;177208;177209;177210;177211;177212;177213;177214;177215;177216;177217;177218;177219;177220;177221 141120;141121;141122;141123;141124;141125;141126;141127;141128;141129;141130;141131;141132;141133;141134;141135;141136;141137;141138 141136 19 GWQDVTATSAYKK Unmodified 1453.7201 0.72014333 1768 P55327 TPD52 Tumor protein D52 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.08 4 1 21 2 2 1 1 2 2 2 2 2 2 2 2 2 2 46.367 45.366 2;3 1.2864E-07 61680 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 129.16 119.2 890370000 112290000 21865000 10255000 31999000 50656000 0 59592000 74717000 22371000 59412000 92512000 113240000 80152000 54524000 106790000 21081 1768 19239 177222;177223;177224;177225;177226;177227;177228;177229;177230;177231;177232;177233;177234;177235;177236;177237;177238;177239;177240;177241;177242;177243;177244;177245;177246;177247 141139;141140;141141;141142;141143;141144;141145;141146;141147;141148;141149;141150;141151;141152;141153;141154;141155;141156 141146 16 GWSQEGPVK Unmodified 986.48214 0.48214489 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 30.472 30.709 2 0.0045489 33622 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 86.472 63.543 138130000 0 0 0 0 7745300 11091000 9532500 9802600 7998500 12765000 11685000 18967000 12995000 11406000 24146000 21082 4285 19240 177248;177249;177250;177251;177252;177253;177254;177255;177256;177257;177258 141157;141158;141159;141160;141161;141162;141163;141164;141165;141166;141167;141168 141157 12 GWVNTLVGGQK Unmodified 1157.6193 0.61930707 1006 P14735 IDE Insulin-degrading enzyme yes yes 0 0 0 By MS/MS 2 0 1 1 77.539 69.409 2 0.00051722 91300 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 99.442 59.173 30965000 30965000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21083 1006 19241 177259 141169 141169 1 GYAEVVVASENSVHK Unmodified 1587.7893 0.78928553 3357 Q8N684 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.16 3.73 5 2 12 3 2 2 1 1 1 1 1 1 1 1 1 1 1 1 54.438 52.747 2;3 3.3575E-15 72163 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 150.06 146.04 368630000 49674000 39873000 88470000 7981600 11552000 11074000 17487000 18051000 12011000 17414000 15608000 25011000 13588000 15142000 25697000 21084 3357 19242 177260;177261;177262;177263;177264;177265;177266;177267;177268;177269;177270;177271;177272;177273;177274;177275;177276;177277;177278 141170;141171;141172;141173;141174;141175;141176;141177;141178;141179;141180;141181;141182;141183;141184;141185;141186;141187;141188;141189 141179 18 GYAFIEFASFEDAK Unmodified 1593.7351 0.73512469 1085 P19338 NCL Nucleolin yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 95.189 89.703 2 2.4643E-14 93107 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 137.17 127.48 212690000 200560000 12129000 0 0 0 0 0 0 0 0 0 0 0 0 0 21085 1085 19243 177279;177280;177281 141190;141191;141192;141193;141194;141195;141196 141194 7 GYAFNHSADFETVR Unmodified 1612.727 0.72701962 1836 P61160 ACTR2 Actin-related protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 57.047 57.167 3 7.8903E-08 64966 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 79.646 75.805 201710000 0 0 0 14342000 11535000 14468000 9098900 10770000 7266500 11035000 20830000 17572000 12033000 14290000 58466000 21086 1836 19244 177282;177283;177284;177285;177286;177287;177288;177289;177290;177291;177292;177293 141197;141198;141199;141200;141201;141202;141203;141204;141205;141206;141207;141208;141209;141210;141211 141205 13 GYAFVHFETQEAADK Unmodified 1711.7842 0.78420015 2268 Q13310 PABPC4 Polyadenylate-binding protein 4 yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 73.47 66.859 2;3 0.00013087 88376 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.03 90.394 66825000 62152000 0 4673200 0 0 0 0 0 0 0 0 0 0 0 0 21087 2268 19245 177294;177295;177296 141212;141213;141214;141215 141214 4 GYAFVQYSNER Unmodified 1332.6099 0.6098646 4972 Q9UKM9 RALY RNA-binding protein Raly yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.726 55.852 2 0.00026679 63311 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 92.062 85.758 76149000 0 0 0 3527300 3582100 5984900 5161500 4523800 4233500 7364700 6443500 9614000 6994200 7391400 11328000 21088 4972 19246 177297;177298;177299;177300;177301;177302;177303;177304;177305;177306;177307;177308 141216;141217;141218;141219;141220;141221;141222;141223;141224;141225;141226;141227 141218 11 GYAIGNAPELAK Unmodified 1202.6295 0.62953741 3624 Q92560 BAP1 Ubiquitin carboxyl-terminal hydrolase BAP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 57.786 57.059 2 0.0020068 65017 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 64.297 48.095 165240000 0 79559000 0 0 7899700 7362200 6973400 5577000 0 7502000 9254200 13501000 8678800 8179100 10753000 21089 3624 19247 177309;177310;177311;177312;177313;177314;177315;177316;177317;177318;177319;177320 141228;141229;141230;141231;141232;141233;141234;141235 141228 7 GYALSYLSEDGCK Unmodified 1461.6446 0.64459513 4430 Q9H788 SH2D4A SH2 domain-containing protein 4A yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 71.795 66.726 2 4.5908E-08 84770 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.24 91.046 149660000 0 149660000 0 0 0 0 0 0 0 0 0 0 0 0 0 21090 4430 19248 177321;177322 141236;141237;141238 141236 3 GYAPESVLERSWGTEK Unmodified 1807.8741 0.87407779 5258 Q9Y606 PUS1 tRNA pseudouridine synthase A, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 77.394 71.947 3 0.018386 93175 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 36.029 31.995 28797000 25715000 0 3082400 0 0 0 0 0 0 0 0 0 0 0 0 21091 5258 19249 177323;177324 141239;141240 141239 2 GYASPDLSK Unmodified 936.45526 0.45526144 769 P04049 RAF1 RAF proto-oncogene serine/threonine-protein kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 27.823 28.145 2 0.022744 30209 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 51.346 29.818 28067000 0 0 0 0 0 0 0 0 0 7826000 11693000 0 8548100 0 0 21092 769 19250 177325;177326;177327 141241 141241 1 GYAVLGGER Unmodified 920.47158 0.4715802 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 38.459 38.629 2 0.012629 41759 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 92.47 71.915 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21093 1565 19251 177328;177329;177330;177331;177332;177333 141242;141243;141244;141245;141246;141247 141245 6 GYAVNVFDIQQGFDNPQVR Unmodified 2166.0494 0.049416394 2569 Q15738 NSDHL Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 2 1 1 1 1 88.021 88.162 2;3 3.9097E-14 102560 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 110.29 89.064 11658000 0 0 0 0 0 1618800 0 2356300 0 4770100 2912400 0 0 0 0 21094 2569 19252 177334;177335;177336;177337;177338;177339 141248;141249;141250 141250 3 GYAYTFITEDQAR Unmodified 1533.71 0.70997257 3041 Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 71.898 71.741 2 1.2871E-08 82818 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 124.92 109.03 563550000 0 0 1992900 18128000 27978000 42682000 41184000 38283000 40088000 58484000 60018000 66622000 42507000 54011000 71573000 21095 3041 19253 177340;177341;177342;177343;177344;177345;177346;177347;177348;177349;177350;177351;177352 141251;141252;141253;141254;141255;141256;141257;141258;141259;141260;141261;141262;141263 141260 13 GYAYTFITEDQARYAGDIIK Unmodified 2294.1219 0.12191263 3041 Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 0 0 1 By MS/MS 2 0 1 1 89.288 81.157 3 0.0052713 105523 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 36.637 31.38 6880300 6880300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21096 3041 19254 177353 141264 141264 1 GYAYVEFENPDEAEK Unmodified 1759.7577 0.75771063 2513 Q15287 RNPS1 RNA-binding protein with serine-rich domain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 69.224 68.072 2 8.2747E-58 85248 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 176.42 168.62 380520000 10321000 115010000 0 10411000 13992000 18170000 18592000 13833000 17240000 22721000 26329000 34924000 21889000 22128000 34965000 21097 2513 19255 177354;177355;177356;177357;177358;177359;177360;177361;177362;177363;177364;177365;177366;177367;177368 141265;141266;141267;141268;141269;141270;141271;141272;141273;141274;141275;141276;141277;141278;141279;141280;141281;141282 141270 18 GYDDRDYYSR Unmodified 1308.5371 0.53709359 1935 P62995 TRA2B Transformer-2 protein homolog beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.776 24.978 3 0.024511 26681 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 41.164 37.368 129850000 0 0 0 9759100 7098700 10173000 5852400 10149000 6562100 10499000 10946000 16863000 11818000 8121600 22013000 21098 1935 19256 177369;177370;177371;177372;177373;177374;177375;177376;177377;177378;177379;177380 141283;141284;141285 141283 2 GYDFDTVNK Unmodified 1057.4716 0.47163978 4487 Q9HAP2 MLXIP MLX-interacting protein yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 41.919 41.914 2 0.020833 47389 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 52.786 43.392 17261000 0 0 0 0 3747400 4326500 0 0 0 4824500 0 0 0 4362300 0 21099 4487 19257 177381;177382;177383;177384 141286 141286 1 GYDFESETDTETIAK Unmodified 1704.7366 0.73664084 2125 Q06210 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 60.876 59.446 2 2.9616E-56 76405 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 197.56 195.24 725070000 25979000 489830000 0 7836100 9827900 19126000 12734000 10294000 9600500 13631000 20811000 25233000 16193000 21874000 42100000 21100 2125 19258 177385;177386;177387;177388;177389;177390;177391;177392;177393;177394;177395;177396;177397;177398;177399;177400 141287;141288;141289;141290;141291;141292;141293;141294;141295;141296;141297;141298;141299;141300;141301;141302;141303 141295 17 GYDFPAVLR Unmodified 1036.5342 0.53418046 4777 Q9NZN4 EHD2 EH domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.821 77.866 2 0.003216 89936 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 90.777 62.264 102070000 0 0 0 5139500 4922600 9219600 6637000 0 4935600 15963000 9682800 12912000 8732800 6291300 17632000 21101 4777 19259 177401;177402;177403;177404;177405;177406;177407;177408;177409;177410;177411;177412 141304;141305;141306;141307;141308;141309;141310;141311;141312;141313;141314;141315 141313 12 GYDNLFAMEIDPSLGVAELPDEFFEEDNMLSMGK Oxidation (M) 3838.694 0.69399602 353 O43681 ASNA1 ATPase ASNA1 yes yes 0 1 0 By MS/MS 2 0 1 1 101.94 93.808 3 1.7821E-22 120737 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.903 67.371 6579700 6579700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21102 353 19260 177413 141316 141316 440 1 GYDNLFAMEIDPSLGVAELPDEFFEEDNMLSMGK Unmodified 3822.6991 0.6990814 353 O43681 ASNA1 ATPase ASNA1 yes yes 0 0 0 By MS/MS 2 0 1 1 102.81 94.679 3 9.8287E-19 121745 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.583 52.282 14715000 14715000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21103 353 19260 177414 141317 141317 1 GYDSAGVGFDGGNDK Unmodified 1457.6059 0.60590143 2125 Q06210 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.823 41.001 2 7.246E-05 44557 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.551 92.503 163700000 0 0 0 6942900 6284200 12725000 9089600 11239000 6396300 11793000 21588000 17258000 11927000 13669000 34789000 21104 2125 19261 177415;177416;177417;177418;177419;177420;177421;177422;177423;177424;177425;177426 141318;141319;141320;141321;141322;141323;141324;141325;141326;141327 141321 7 GYDVDFPR Unmodified 967.43995 0.43994572 2125;588 Q06210;O94808 GFPT1;GFPT2 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1;Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 57.311 57.431 2 0.016586 65212 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 67.032 59.361 115620000 0 0 0 5193400 8127000 10035000 5643400 7720700 4550900 8585900 14849000 13060000 6498800 11290000 20069000 21105 2125;588 19262 177427;177428;177429;177430;177431;177432;177433;177434;177435;177436;177437;177438 141328;141329 141329 2 GYDVIAQAQSGTGK Unmodified 1393.6838 0.68375782 1816;2396 P60842;Q14240 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 5.35 3.91 1 7 2 7 2 7 1 1 1 1 1 1 1 1 52.54 50.136 2;3 5.8941E-48 56091 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 184.24 164.1 4343200000 183680000 3225000000 12370000 63691000 0 204920000 92084000 89773000 0 201410000 0 131620000 138690000 0 0 21106 1816;2396 19263 177439;177440;177441;177442;177443;177444;177445;177446;177447;177448;177449;177450;177451;177452;177453;177454;177455 141330;141331;141332;141333;141334;141335;141336;141337;141338;141339;141340;141341;141342;141343;141344;141345;141346;141347;141348;141349;141350;141351;141352 141341 21 GYEDDDYVSK Unmodified 1189.4775 0.47751302 1675 P51946 CCNH Cyclin-H yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 4 1 1 2 27.801 28.158 2 0.028845 30110 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 58.433 51.538 5974700 0 0 0 0 0 0 2714000 0 0 0 0 0 0 0 3260600 21107 1675 19264 177456;177457;177458;177459 141353;141354;141355 141353 3 GYEDYLQSPLQPLMDNLESQTYEVFEK Unmodified 3235.4907 0.49072683 208 O14744 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 101.12 96.444 3 1.5981E-46 119998 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.19 101.47 78950000 30562000 45228000 3160300 0 0 0 0 0 0 0 0 0 0 0 0 21108 208 19265 177460;177461;177462;177463 141356;141357;141358;141359;141360 141357 5 GYEEEIIHFK Unmodified 1263.6136 0.61355299 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.24 2.35 2 19 1 1 1 1 2 2 1 2 2 2 1 2 2 1 67.69 67.164 2;3 0.0015698 76805 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 93.374 64.975 169010000 11604000 13827000 0 3096400 1958800 24438000 7077000 8457200 14086000 13007000 13096000 12038000 12615000 13613000 20098000 21109 3676 19266 177464;177465;177466;177467;177468;177469;177470;177471;177472;177473;177474;177475;177476;177477;177478;177479;177480;177481;177482;177483;177484 141361;141362;141363;141364;141365;141366;141367;141368;141369;141370;141371;141372;141373 141370 12 GYEEEIIHFKK Unmodified 1391.7085 0.70851601 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 1 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 56.492 56.758 3 0.0015605 63467 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.158 32.15 52475000 0 0 0 0 0 5133000 3776200 6174500 3248800 0 0 10654000 6749000 4660300 12080000 21110 3676 19267 177485;177486;177487;177488;177489;177490;177491;177492 141374;141375 141374 2 GYEEVHVPALK Unmodified 1240.6452 0.64518747 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching 5.64 3.98 6 5 1 2 3 1 1 1 1 1 60.755 58.061 2;3 2.4085E-06 75782 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.12 77.52 164160000 3752800 88268000 26125000 2602300 0 18199000 0 0 0 9034300 0 8830700 0 0 7351700 21111 528 19268 177493;177494;177495;177496;177497;177498;177499;177500;177501;177502;177503 141376;141377;141378;141379;141380;141381;141382 141377 6 GYEFESETDTETIAK Unmodified 1718.7523 0.7522909 588 O94808 GFPT2 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 61.616 56.269 2 4.2939E-45 72123 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 158.41 155.65 33648000 0 33648000 0 0 0 0 0 0 0 0 0 0 0 0 0 21112 588 19269 177504;177505 141383 141383 1 GYEGSLIK Unmodified 865.45453 0.45453316 3707 Q93062 RBPMS RNA-binding protein with multiple splicing no no 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.499 37.679 2 0.032623 40210 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.205 14.987 160170000 0 0 0 7825600 773060 10285000 12431000 10570000 8868900 15845000 16362000 19008000 13524000 11886000 32796000 21113 3707 19270 177506;177507;177508;177509;177510;177511;177512;177513;177514;177515;177516;177517 141384;141385;141386;141387;141388;141389 141386 6 GYEIDEDIVSR Unmodified 1294.6041 0.60411052 200 O14656 TOR1A Torsin-1A yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 61.937 62.117 2 0.00079378 71075 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 77.192 34.327 26430000 0 0 0 0 0 0 0 12308000 0 0 0 0 14122000 0 0 21114 200 19271 177518;177519 141390;141391 141390 2 GYELLFQPEVVR Unmodified 1448.7664 0.76636524 426 O60716 CTNND1 Catenin delta-1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 85.74 85.85 2 0.00073229 98696 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 75.294 64.771 28295000 0 0 0 0 2259500 0 2411600 4639900 2401400 4126900 4125900 5646400 0 2683400 0 21115 426 19272 177520;177521;177522;177523;177524;177525;177526;177527 141392;141393;141394;141395 141394 4 GYELVPNLEIPTVNPVAIK Unmodified 2065.1459 0.14594254 2 A0AV96 RBM47 RNA-binding protein 47 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 94.981 95.134 2 1.4445E-08 110579 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 83.314 77.999 9794800 0 0 0 0 0 0 0 0 0 4221200 1910400 0 0 0 3663100 21116 2 19273 177528;177529;177530 141396;141397;141398;141399 141396 4 GYESFGVHR Unmodified 1050.4883 0.4882929 2101 Q04446 GBE1 1,4-alpha-glucan-branching enzyme yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 32.609 33.123 2 0.037906 34992 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.081 21.109 15269000 0 0 0 0 0 0 0 0 0 0 0 0 0 5588400 9681000 21117 2101 19274 177531;177532 141400 141400 1 GYEVHGIVRR Unmodified 1184.6414 0.6414395 411 O60547 GMDS GDP-mannose 4,6 dehydratase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 27.328 27.464 3 0.013999 29461 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 30.612 21.401 21260000 0 0 0 0 0 4956700 4981500 3998600 4683200 0 0 0 2640400 0 0 21118 411 19275 177533;177534;177535;177536;177537 141401;141402;141403 141402 2 GYEVIYLTEPVDEYCIQALPEFDGK Unmodified 2947.3837 0.38374256 1002 P14625 HSP90B1 Endoplasmin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 3 2 1 97.441 91.608 3 4.389E-78 115934 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 134.81 127.94 395030000 346360000 36554000 12113000 0 0 0 0 0 0 0 0 0 0 0 0 21119 1002 19276 177538;177539;177540;177541;177542;177543 141404;141405;141406;141407;141408;141409;141410;141411;141412 141410 9 GYFAVTEK Unmodified 913.45453 0.45453316 2228 Q13045 FLII Protein flightless-1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 43.481 43.267 2 0.016045 48409 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 67.903 39.331 210550000 0 41717000 0 8496500 8559400 12374000 10927000 9552300 13994000 11353000 19960000 21090000 16522000 16060000 19948000 21120 2228 19277 177544;177545;177546;177547;177548;177549;177550;177551;177552;177553;177554;177555;177556 141413;141414;141415;141416;141417;141418;141419 141414 7 GYFDEEMNR Oxidation (M) 1175.4553 0.45533779 2501;1802 Q15149;P58107 PLEC;EPPK1 Plectin;Epiplakin no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 34.769 34.926 2 0.010436 37925 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.047 40.845 71492000 0 0 0 13817000 5117100 0 0 4797300 5668400 0 7973500 13796000 14075000 6246600 0 21121 2501;1802 19278 177557;177558;177559;177560;177561;177562;177563;177564 141420;141421;141422;141423 141421 2921 4 GYFEHREDR Unmodified 1207.537 0.53703401 4162 Q9BUJ2 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.929 14.092 3 0.047945 12560 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.608 35.293 153030000 0 0 0 8012300 3164300 11252000 5588900 7790500 8699200 10956000 9889500 24521000 21349000 12115000 29689000 21122 4162 19279 177565;177566;177567;177568;177569;177570;177571;177572;177573;177574;177575;177576 141424 141424 0 GYFEYIEENK Unmodified 1290.5768 0.57683314 2046 Q00839 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 4 18 1 1 2 2 1 2 2 1 1 2 1 2 1 2 1 69.161 69.071 2 2.3101E-11 78586 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 161.02 151.33 6034200000 1329300 518240 3969900 258370000 312120000 428760000 330960000 368590000 418040000 721930000 651220000 864830000 534090000 416770000 722680000 21123 2046 19280 177577;177578;177579;177580;177581;177582;177583;177584;177585;177586;177587;177588;177589;177590;177591;177592;177593;177594;177595;177596;177597;177598 141425;141426;141427;141428;141429;141430;141431;141432;141433;141434;141435;141436;141437;141438;141439;141440;141441;141442;141443;141444;141445;141446;141447;141448;141449;141450;141451;141452;141453;141454;141455;141456;141457;141458 141441 33 GYFSAVPK Unmodified 867.44905 0.44905385 5171 Q9Y3P9 RABGAP1 Rab GTPase-activating protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 53.12 49.208 2 0.039421 61846 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 70.912 25.94 15055000 0 0 15055000 0 0 0 0 0 0 0 0 0 0 0 0 21124 5171 19281 177599 141459 141459 1 GYGFAEYMK Oxidation (M) 1080.4586 0.45863226 3276 Q8IY67 RAVER1 Ribonucleoprotein PTB-binding 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.06 2.58 2 15 1 1 2 1 1 1 1 1 1 1 2 1 1 2 47.529 46.886 2 0.006118 52486 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 67.169 63.152 281180000 6891300 12838000 0 23388000 13367000 15237000 15913000 15568000 14900000 18670000 18861000 51385000 24189000 16175000 33798000 21125 3276 19282 177600;177601;177602;177603;177604;177605;177606;177607;177608;177609;177610;177611;177612;177613;177614;177615;177616 141460;141461;141462;141463;141464;141465;141466;141467;141468;141469;141470;141471;141472;141473;141474;141475;141476 141467 4880 15 GYGFAEYMK Unmodified 1064.4637 0.46371763 3276 Q8IY67 RAVER1 Ribonucleoprotein PTB-binding 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66.556 65.457 2 0.0071238 74833 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 73.26 49.288 463320000 24402000 49015000 5050400 17749000 17971000 27047000 28579000 32333000 23623000 36712000 37265000 45063000 25554000 34386000 58566000 21126 3276 19282 177617;177618;177619;177620;177621;177622;177623;177624;177625;177626;177627;177628;177629;177630;177631 141477;141478;141479;141480;141481;141482 141480 6 GYGFGLIK Unmodified 853.46979 0.46978929 1129 P21796 VDAC1 Voltage-dependent anion-selective channel protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.609 71.681 2 0.035132 83261 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 52.683 18.945 84065000 0 0 0 16630000 4754400 4266900 3724000 7987100 3730400 7851700 7871700 9644000 6850800 3817300 6937100 21127 1129 19283 177632;177633;177634;177635;177636;177637;177638;177639;177640;177641;177642;177643 141483 141483 1 GYGFIEYEK Unmodified 1104.5128 0.51277632 4912 Q9UHX1 PUF60 Poly(U)-binding-splicing factor PUF60 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 62.715 61.374 2 0.0033037 70195 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 93.374 79.217 1580500000 33911000 172930000 30583000 63413000 74228000 87347000 106710000 72960000 83421000 112780000 119200000 154680000 125340000 132790000 210200000 21128 4912 19284 177644;177645;177646;177647;177648;177649;177650;177651;177652;177653;177654;177655;177656;177657;177658;177659 141484;141485;141486;141487;141488;141489;141490;141491;141492;141493;141494;141495;141496;141497;141498;141499;141500;141501;141502;141503 141485 17 GYGFITFSDSECAK Unmodified 1580.6817 0.68170891 2410 Q14498 RBM39 RNA-binding protein 39 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 77.483 77.282 2 5.3579E-17 88736 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 123.8 117.56 132970000 0 4809300 0 4190200 6123400 6766500 4579500 6925300 9430500 11569000 13524000 19847000 11303000 10150000 23751000 21129 2410 19285 177660;177661;177662;177663;177664;177665;177666;177667;177668;177669;177670;177671;177672 141504;141505;141506;141507;141508;141509;141510;141511 141505 8 GYGFVDFDSPAAAQK Unmodified 1571.7256 0.72562264 1252 P29558;Q6XE24 RBMS1;RBMS3 RNA-binding motif, single-stranded-interacting protein 1;RNA-binding motif, single-stranded-interacting protein 3 yes no 0 0 0 By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.36 2.01 1 10 1 1 1 1 1 1 1 1 1 1 1 76.675 76.396 2 0.00053259 87812 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.653 70.243 53569000 0 2683200 0 3276100 2275800 3368500 6008800 0 3479900 5087200 7145800 0 3978100 5393600 10872000 21130 1252 19286 177673;177674;177675;177676;177677;177678;177679;177680;177681;177682;177683 141512;141513;141514;141515;141516;141517;141518 141514 6 GYGFVEYMK Unmodified 1092.495 0.49501776 4516 Q9HCJ3 RAVER2 Ribonucleoprotein PTB-binding 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 71.245 70.629 2 0.014158 81431 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 58.716 49.853 58397000 13839000 0 0 0 2970200 4185800 2891500 4349000 4340300 0 3925400 5046500 3335400 3999200 9515100 21131 4516 19287 177684;177685;177686;177687;177688;177689;177690;177691;177692;177693;177694 141519;141520;141521;141522;141523;141524 141519 6 GYGFVHFETQEAAER Unmodified 1739.7903 0.79034816 958 P11940 PABPC1 Polyadenylate-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 64.396 64.634 3 0.0019256 73541 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 45.438 30.647 98118000 0 0 0 0 0 10964000 0 5489600 9042000 7108100 6384900 14208000 6929000 6328400 31663000 21132 958 19288 177695;177696;177697;177698;177699;177700;177701;177702;177703 141525;141526 141526 2 GYGFVHFETQEAAERAIEK Unmodified 2181.0491 0.049082043 958 P11940 PABPC1 Polyadenylate-binding protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 79.917 71.786 4 0.010125 94184 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 36.481 32.886 18556000 18556000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21133 958 19289 177704 141527 141527 1 GYGFVSFFNK Unmodified 1164.5604 0.56039521 1302 P31483 TIA1 Nucleolysin TIA-1 isoform p40 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 85.121 85.236 2 0.037339 98806 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 40.882 27.615 12686000 0 0 0 0 0 3019800 0 0 0 0 0 2171400 0 1717800 5777100 21134 1302 19290 177705;177706;177707;177708 141528;141529 141528 2 GYGFVSFK Unmodified 903.44905 0.44905385 4141 Q9BTD8 RBM42 RNA-binding protein 42 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 67.21 67.36 2 0.035595 77117 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 52.403 29.474 267220000 0 0 0 0 14495000 20618000 21563000 23865000 19122000 25140000 28276000 31443000 21986000 24179000 36539000 21135 4141 19291 177709;177710;177711;177712;177713;177714;177715;177716;177717;177718;177719 141530;141531;141532 141531 3 GYGFVSFYNK Unmodified 1180.5553 0.55530983 2048 Q01085 TIAL1 Nucleolysin TIAR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 1 1 1 1 1 1 1 1 1 1 1 1 1 75.808 74.961 2 0.002807 86596 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 79.906 71.043 100450000 22635000 2561000 0 2853700 2571800 8334300 4520900 4169900 5087500 8593000 7567400 0 5688700 6135600 19731000 21136 2048 19292 177720;177721;177722;177723;177724;177725;177726;177727;177728;177729;177730;177731;177732 141533;141534;141535;141536;141537;141538;141539;141540;141541;141542;141543;141544;141545;141546 141533 13 GYGLFAGPCK Unmodified 1068.5063 0.50625115 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 59.72 60.155 2 0.0063563 67701 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.252 53.483 61585000 0 0 0 0 0 0 0 0 0 0 0 15799000 0 14941000 30844000 21137 1986 19293 177733;177734;177735 141547;141548 141547 1 GYGLLHTAAASGQIEVVK Unmodified 1812.9734 0.9733979 3386 Q8NB46 ANKRD52 Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C yes yes 0 0 0 By MS/MS 2 0 1 1 79.378 71.247 3 2.3367E-06 93569 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 91.317 78.975 20311000 20311000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21138 3386 19294 177736 141549 141549 1 GYGPATQVR Unmodified 947.48248 0.48247924 1663 P51610;Q9Y5Z7 HCFC1;HCFC2 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6;Host cell factor 2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.598 24.8 2 2.6766E-05 26875 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 140.98 112.47 871530000 0 0 0 58736000 49053000 58504000 57415000 66020000 43539000 65385000 63724000 122920000 70935000 56801000 158500000 21139 1663 19295 177737;177738;177739;177740;177741;177742;177743;177744;177745;177746;177747;177748 141550;141551;141552;141553;141554;141555;141556;141557;141558;141559;141560;141561 141561 9 GYGPATQVRWLQETSK Unmodified 1819.9217 0.92169668 1663 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes yes 0 0 1 By MS/MS 2 0 1 1 76.654 68.523 3 0.00053412 90379 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.237 31.699 14051000 14051000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21140 1663 19296 177749 141562 141562 1 GYGYGQGAGTLNMDRGER Unmodified 1900.8486 0.8486081 2607 Q16527 CSRP2 Cysteine and glycine-rich protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 45.633 46.279 3 0.00028034 51043 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.888 46.228 21086000 0 0 0 0 0 0 0 0 0 0 4301400 5134200 0 0 11650000 21141 2607 19297 177750;177751;177752 141563;141564;141565 141563 2 GYGYGQGAGTLSTDK Unmodified 1473.6736 0.67358707 1123 P21291 CSRP1 Cysteine and glycine-rich protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 6 4.02 1 3 1 5 2 2 1 1 1 1 1 1 47.261 45.986 2 3.6379E-49 42704 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 165.66 133.34 2024300000 90799000 1716300000 10462000 0 0 0 0 6595100 0 0 50085000 36026000 0 35452000 78613000 21142 1123 19298 177753;177754;177755;177756;177757;177758;177759;177760;177761;177762 141566;141567;141568;141569;141570;141571;141572;141573;141574;141575;141576;141577 141576 11 GYGYGQGAGTLSTDKGESLGIK Unmodified 2158.0542 0.054227 1123 P21291 CSRP1 Cysteine and glycine-rich protein 1 yes yes 0 0 1 By MS/MS 10 0 1 1 60.041 60.627 3 1.2453E-08 68390 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.585 49.865 7079200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7079200 21143 1123 19299 177763 141578 141578 0 GYIAMLAVDSK Unmodified 1166.6005 0.60054547 2448 Q147X3 NAA30 N-alpha-acetyltransferase 30 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 74.933 75.115 2 0.0043894 86663 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 61.593 52.681 21593000 0 0 0 0 0 0 0 0 0 5364400 5864700 10364000 0 0 0 21144 2448 19300 177764;177765;177766 141579;141580 141579 2 GYIDLSK Unmodified 794.41742 0.41741937 804 P05198 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes yes 0 0 0 By MS/MS By MS/MS 2.67 0.471 1 2 1 2 46.234 41.001 2 0.029852 51000 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 94.163 9.8045 935150000 1092300 934060000 0 0 0 0 0 0 0 0 0 0 0 0 0 21145 804 19301 177767;177768;177769 141581 141581 1 GYIFLEYASPAHAVDAVK Unmodified 1949.9887 0.98871362 1776 P55884 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 0 0 0 By MS/MS 10 0 1 1 83.876 84.066 3 0.0059302 96970 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 31.901 22.113 8494700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8494700 21146 1776 19302 177770 141582 141582 1 GYIGVVNR Unmodified 876.48175 0.48175096 1630 P50570;Q05193 DNM2;DNM1 Dynamin-2;Dynamin-1 yes no 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 38.305 38.546 2 0.013435 42183 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 72.355 46.797 159950000 0 0 0 0 10121000 13131000 12213000 9718200 10157000 16325000 14610000 23211000 15296000 10976000 24194000 21147 1630 19303 177771;177772;177773;177774;177775;177776;177777;177778;177779;177780;177781 141583;141584;141585;141586;141587 141587 5 GYISPYFINTSK Unmodified 1388.6976 0.69761697 930 P10809 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.826 75.889 2 6.7727E-07 87522 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 136.99 136.6 1430600000 0 0 0 60957000 73324000 110830000 99234000 100580000 78961000 124360000 159120000 140500000 159610000 97243000 225840000 21148 930 19304 177782;177783;177784;177785;177786;177787;177788;177789;177790;177791;177792;177793 141588;141589;141590;141591;141592;141593;141594;141595;141596;141597;141598;141599;141600;141601;141602 141591 15 GYIWNYGAIPQTWEDPGHNDK Unmodified 2460.1135 0.11347321 2505 Q15181 PPA1 Inorganic pyrophosphatase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 89.47 84.317 3 6.1377E-09 106848 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.533 75.533 68150000 34771000 30926000 2453500 0 0 0 0 0 0 0 0 0 0 0 0 21149 2505 19305 177794;177795;177796 141603;141604;141605;141606 141604 4 GYIYVEAYK Unmodified 1104.5492 0.54916182 136 O00267 SUPT5H Transcription elongation factor SPT5 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 63.667 58.827 2 0.029348 75656 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.169 48.631 19701000 0 16849000 2852100 0 0 0 0 0 0 0 0 0 0 0 0 21150 136 19306 177797;177798 141607 141607 1 GYKPPDEGPSEYQTIPLNK Unmodified 2132.0426 0.042599681 3684 Q92905 COPS5 COP9 signalosome complex subunit 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 63.424 62.083 3 1.3703E-27 75854 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 119.76 112.56 848660000 19824000 488020000 15599000 11774000 15438000 23291000 18628000 21825000 13595000 30137000 42021000 30716000 21498000 24992000 71308000 21151 3684 19307 177799;177800;177801;177802;177803;177804;177805;177806;177807;177808;177809;177810;177811;177812;177813;177814 141608;141609;141610;141611;141612;141613;141614;141615;141616;141617;141618;141619;141620;141621;141622 141613 13 GYKVTFHPTGDDRR Unmodified 1647.8118 0.8117523 4052 Q99715 COL12A1 Collagen alpha-1(XII) chain yes yes 0 0 2 By MS/MS By MS/MS 10 0 2 1 1 22.1 22.037 4 0.025456 23023 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 25.322 8.7922 15429000 0 0 0 0 4676900 0 0 0 0 10752000 0 0 0 0 0 21152 4052 19308 177815;177816 141623;141624 141623 2 GYLALCSYNCK Unmodified 1347.5951 0.59514251 1273 P30260 CDC27 Cell division cycle protein 27 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 67.9 59.605 2 0.0063033 79762 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.85 80.847 5629100 5629100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21153 1273 19309 177817 141625 141625 1 GYLDDPTVPR Unmodified 1131.556 0.55603812 947 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 53.208 53.532 2 0.0017601 60725 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 88.819 65.799 472420000 0 0 0 0 0 32392000 0 0 27246000 41113000 84984000 77586000 36360000 41735000 131010000 21154 947 19310 177818;177819;177820;177821;177822;177823;177824;177825;177826 141626;141627;141628;141629;141630;141631;141632;141633;141634;141635 141626 9 GYLGPEQLPDCLK Unmodified 1488.7283 0.72826518 1423 P40926 MDH2 Malate dehydrogenase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 79.186 75.616 2 6.0739E-21 93790 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 137.98 108.23 1115200000 0 1106600000 8525100 0 0 0 0 0 0 0 0 0 0 0 0 21155 1423 19311 177827;177828;177829 141636;141637;141638;141639 141636 4 GYLISGSSYAR Unmodified 1172.5826 0.58258722 3170 Q86VP6 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 52.03 51.438 2 0.00064815 58119 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 93.649 75.246 261600000 8425100 0 0 0 11002000 40550000 13585000 21512000 10247000 29447000 26288000 0 20253000 31427000 48865000 21156 3170 19312 177830;177831;177832;177833;177834;177835;177836;177837;177838;177839;177840 141640;141641;141642;141643;141644;141645;141646;141647;141648;141649;141650;141651 141640 12 GYLLQIFTK Unmodified 1081.6172 0.61718181 1323 P32754 HPD 4-hydroxyphenylpyruvate dioxygenase yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 87.327 87.293 2 0.0069711 101238 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.665 59.889 10164000 0 0 0 1743000 0 0 0 0 0 0 0 0 0 809610 7611400 21157 1323 19313 177841;177842;177843 141652 141652 1 GYLNQVDLQEK Unmodified 1305.6565 0.65648044 4447 Q9H892 TTC12 Tetratricopeptide repeat protein 12 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 62.24 56.902 2 0.021004 73006 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.572 59.802 38461000 0 38461000 0 0 0 0 0 0 0 0 0 0 0 0 0 21158 4447 19314 177844;177845 141653 141653 1 GYLPSHYER Unmodified 1120.5302 0.53015772 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 32.838 33.345 2 0.023437 36337 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 51.059 32.735 20965000 0 0 0 0 0 0 0 0 0 0 9653600 0 3320700 0 7990200 21159 2930 19315 177846;177847;177848 141654 141654 1 GYMDLMPFINK 2 Oxidation (M) 1359.6203 0.62029463 324 O43396 TXNL1 Thioredoxin-like protein 1 yes yes 0 2 0 By MS/MS By MS/MS 10 0 2 1 1 71.214 71.558 2 0.0033742 81635 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.554 39.55 8739900 0 0 0 0 0 0 0 0 0 0 3603600 0 0 0 5136300 21160 324 19316 177849;177850 141655 141655 412;413 1 GYMDLMPFINK Oxidation (M) 1343.6254 0.62538001 324 O43396 TXNL1 Thioredoxin-like protein 1 yes yes 0 1 0 By MS/MS By MS/MS 6 4 1 1 1 1 86.135 82.165 2 0.0032912 96552 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.118 49.253 10286000 5473400 0 0 0 0 0 0 0 0 0 0 0 0 0 4812400 21161 324 19316 177851;177852 141656;141657 141656 412;413 2 GYMDLMPFINK Unmodified 1327.6305 0.63046539 324 O43396 TXNL1 Thioredoxin-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 92.995 89 2 0.003227 104646 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.42 48.758 10166000 7729000 0 0 0 0 0 0 0 0 0 0 0 0 0 2436500 21162 324 19316 177853;177854 141658;141659 141658 2 GYNATVLAYGQTGSGK Unmodified 1585.7736 0.77363546 632 O95239;Q2VIQ3 KIF4A;KIF4B Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 56.872 56.019 2 0.00018493 63729 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 72.089 60.925 47652000 0 25636000 0 0 2601100 0 3397900 0 0 4454000 4604300 0 0 0 6958300 21163 632 19317 177855;177856;177857;177858;177859;177860 141660;141661;141662;141663;141664;141665 141664 6 GYNENVYTEDGK Unmodified 1387.5892 0.58918874 2926 Q6P2C8 MED27 Mediator of RNA polymerase II transcription subunit 27 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.245 30.442 2 3.4876E-07 32709 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 117.52 113.63 107120000 0 0 0 4903700 5540700 7678000 5731900 8909900 0 7959200 15002000 11413000 11160000 9515000 19309000 21164 2926 19318 177861;177862;177863;177864;177865;177866;177867;177868;177869;177870;177871;177872 141666;141667;141668;141669;141670;141671;141672;141673;141674;141675;141676;141677 141675 12 GYNPAEVGAAGK Unmodified 1132.5513 0.55128709 2241 Q13144 EIF2B5 Translation initiation factor eIF-2B subunit epsilon yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31.944 31.307 2 6.4103E-06 39678 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.11 92.321 191150000 4046500 105960000 0 4092300 4337600 7565900 4754200 5795600 4102900 5715000 9773900 8957100 8669300 7364000 10021000 21165 2241 19319 177873;177874;177875;177876;177877;177878;177879;177880;177881;177882;177883;177884;177885;177886 141678;141679;141680;141681;141682;141683;141684;141685;141686;141687;141688;141689;141690;141691;141692;141693;141694 141682 17 GYNVNDEK Unmodified 937.41412 0.4141249 1993 P80723 BASP1 Brain acid soluble protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.53 3.84 2 3 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 22.995 22.894 2 0.0091721 10394 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 83.753 47.567 636360000 76388000 242880000 2943200 11164000 14162000 21999000 17734000 18109000 17304000 24456000 31815000 56004000 22157000 25465000 53778000 21166 1993 19320 177887;177888;177889;177890;177891;177892;177893;177894;177895;177896;177897;177898;177899;177900;177901;177902;177903 141695;141696;141697;141698;141699;141700;141701;141702;141703;141704;141705;141706;141707;141708;141709 141703 15 GYPDTAALENR Unmodified 1205.5677 0.56766543 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 43.355 43.406 2 0.00087155 49166 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 87.913 79.065 109520000 0 0 0 8886200 9920000 9622400 11961000 11076000 0 12622000 18825000 0 11780000 14831000 0 21167 5262 19321 177904;177905;177906;177907;177908;177909;177910;177911;177912;177913 141710;141711;141712;141713;141714;141715;141716;141717 141716 7 GYPEVALHFVK Unmodified 1258.671 0.67100829 1721 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75.284 74.302 3 0.00014074 94499 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.862 76.815 439980000 216730000 50401000 26495000 3534200 5109900 18717000 6194600 12422000 11119000 13621000 8826000 13946000 11407000 9950200 31506000 21168 1721 19322 177914;177915;177916;177917;177918;177919;177920;177921;177922;177923;177924;177925;177926;177927;177928 141718;141719;141720;141721;141722;141723;141724;141725;141726;141727;141728;141729 141720 12 GYPGDYTK Unmodified 899.4025 0.40249759 1134 P22102 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 21.537 20.822 2 0.015996 21563 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 67.981 24.857 864410000 29392000 693370000 3903800 4952400 0 12087000 7621600 0 6822200 10830000 17696000 20610000 9618800 13677000 33836000 21169 1134 19323 177929;177930;177931;177932;177933;177934;177935;177936;177937;177938;177939;177940;177941 141730;141731;141732;141733;141734 141734 5 GYPHLCSICDLPVHSNK Unmodified 1995.9295 0.92950095 1473 P43243 MATR3 Matrin-3 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 2 2 2 1 2 66.427 65.986 3;4 0.0018235 74615 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.188 31.088 98595000 23463000 0 0 0 0 0 0 0 2290800 0 9136700 14497000 10830000 11345000 27032000 21170 1473 19324 177942;177943;177944;177945;177946;177947;177948;177949;177950;177951;177952 141735;141736;141737;141738 141736 3 GYPHWPAR Unmodified 982.47733 0.47733428 505;1674;3102 Q7Z4V5;Q9Y3E1;O75475;P51858 HDGFRP2;HDGFRP3;PSIP1;HDGF Hepatoma-derived growth factor-related protein 2;Hepatoma-derived growth factor-related protein 3;PC4 and SFRS1-interacting protein;Hepatoma-derived growth factor no no 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 39.614 39.915 2 0.020219 44308 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 62.978 37.36 148050000 0 0 0 0 1119200 7252100 0 0 0 0 35028000 27964000 0 0 76690000 21171 3102;505;1674 19325 177953;177954;177955;177956;177957 141739 141739 1 GYPHWPARIDEMPEAAVK Unmodified 2066.0044 0.0043804565 1674 P51858 HDGF Hepatoma-derived growth factor yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 80.512 75.11 3;4 0.00010518 96340 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.167 51.605 129650000 93235000 36417000 0 0 0 0 0 0 0 0 0 0 0 0 0 21172 1674 19326 177958;177959;177960 141740;141741;141742;141743 141743 4 GYPHWPARIDEMPEAAVK Oxidation (M) 2081.9993 0.99929508 1674 P51858 HDGF Hepatoma-derived growth factor yes yes 0 1 1 By MS/MS 2 0 1 1 74.712 66.581 3 0.0030725 87876 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.532 33.155 47465000 47465000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21173 1674 19326 177961 141744 141744 2686 1 GYPHWPARVDEVPDGAVKPPTNK Unmodified 2529.2765 0.27645622 505 O75475 PSIP1 PC4 and SFRS1-interacting protein yes yes 0 0 2 By MS/MS 10 0 1 1 66.054 66.59 4 0.025442 75332 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 21.693 18.76 11334000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11334000 21174 505 19327 177962 141745 141745 1 GYPPEDIFNLVGK Unmodified 1447.7347 0.73473076 4591 Q9NR45 NANS Sialic acid synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 90.374 89.418 2 0.0064481 103549 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.898 68.636 992860000 0 937280000 15911000 0 0 0 0 0 0 1722100 5409000 4213200 0 3769500 24546000 21175 4591 19328 177963;177964;177965;177966;177967;177968;177969 141746;141747;141748;141749 141747 1 GYQGYPGGDYSGGPQDGGAGK Unmodified 1986.8344 0.83439782 183 O14497 ARID1A AT-rich interactive domain-containing protein 1A yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS 10 0 5 1 1 1 1 1 41.843 42.299 2 0.039168 47019 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 37.613 32.007 27114000 0 0 0 0 0 0 0 0 0 3729700 0 6195000 5203000 3147700 8838900 21176 183 19329 177970;177971;177972;177973;177974 141750 141750 1 GYQPTPAMAK Unmodified 1062.5168 0.51681584 4423 Q9H6S3 EPS8L2 Epidermal growth factor receptor kinase substrate 8-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 30.875 31.097 2 0.019051 32667 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.036 35.842 56908000 0 0 0 0 4500200 0 6202300 6617600 0 8390300 8757200 0 5499300 5459100 11482000 21177 4423 19330 177975;177976;177977;177978;177979;177980;177981;177982 141751;141752;141753;141754;141755 141752 5 GYQQQDAHEFMR Unmodified 1508.6467 0.64666081 5285 Q9Y6I4 USP3 Ubiquitin carboxyl-terminal hydrolase 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 36.613 36.687 3 0.0046933 40606 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 50.207 44.723 72886000 0 0 0 6637900 5823400 7616500 4533800 7734100 4517200 11625000 0 13707000 10691000 0 0 21178 5285 19331 177983;177984;177985;177986;177987;177988;177989;177990;177991 141756;141757;141758;141759;141760;141761 141759 5 GYQTSPDLR Unmodified 1035.4985 0.49852324 3933 Q96N67 DOCK7 Dedicator of cytokinesis protein 7 yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 28.374 28.66 2 0.017618 29933 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.531 24.241 25218000 0 0 0 0 0 12203000 0 4972900 0 0 0 0 0 0 8041400 21179 3933 19332 177992;177993;177994 141762 141762 1 GYSFGHPSSVAGEVVFNTGLGGYPEAITDPAYK Unmodified 3386.6095 0.60953683 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 94.674 86.543 3 3.9868E-06 111978 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 41.551 36.79 8275300 8275300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21180 1300 19333 177995 141763 141763 1 GYSFSLTTFSPSGK Unmodified 1477.7089 0.70890994 1194 P25787 PSMA2 Proteasome subunit alpha type-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.922 81.983 2 1.215E-07 94949 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 108.37 102.73 162790000 0 0 0 4410100 1883500 4365900 2688000 6046100 2691700 5991300 18538000 16936000 1862300 11418000 85961000 21181 1194 19334 177996;177997;177998;177999;178000;178001;178002;178003;178004;178005;178006;178007 141764;141765;141766;141767;141768;141769;141770;141771;141772;141773 141771 9 GYSFTTTAER Unmodified 1131.5197 0.51965261 1951;1815 P60709;P63261 ACTB;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.201 40.381 2 0.00039245 44747 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 138.1 131.99 42798000000 0 0 0 2268000000 3266300000 3555600000 2657200000 2817200000 1893000000 3958500000 4794100000 5079700000 3921200000 3219500000 5367700000 21182 1815;1951 19335 178008;178009;178010;178011;178012;178013;178014;178015;178016;178017;178018;178019 141774;141775;141776;141777;141778;141779;141780;141781;141782;141783;141784;141785;141786;141787;141788;141789;141790;141791;141792;141793;141794;141795;141796;141797;141798;141799;141800;141801 141792 28 GYSFTTTAEREIVR Unmodified 1628.8158 0.81583463 1951;1815 P60709;P63261 ACTB;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 28 2 2 3 3 2 2 2 3 3 2 2 2 64.504 64.613 2;3 6.9962E-135 72659 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 217.14 191.92 25165000000 0 0 0 760480000 957180000 1961300000 1383900000 1595100000 2291400000 2250600000 2121300000 3457000000 1753400000 1516100000 5117000000 21183 1815;1951 19336 178020;178021;178022;178023;178024;178025;178026;178027;178028;178029;178030;178031;178032;178033;178034;178035;178036;178037;178038;178039;178040;178041;178042;178043;178044;178045;178046;178047 141802;141803;141804;141805;141806;141807;141808;141809;141810;141811;141812;141813;141814;141815;141816;141817;141818;141819;141820;141821;141822;141823;141824;141825;141826;141827;141828;141829;141830;141831;141832;141833;141834;141835;141836;141837;141838;141839;141840;141841;141842;141843;141844;141845;141846;141847;141848;141849;141850;141851 141817 44 GYSFTTTAEREIVRDIK Unmodified 1985.0218 0.02180466 1951;1815 P60709;P63261 ACTB;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed no no 0 0 2 By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 10 1 2 2 1 1 1 2 75.321 75.508 3;4 1.5403E-26 86373 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 114.29 104.89 182460000 0 0 0 0 0 3257900 0 8274500 15323000 6986600 3026200 4455600 0 0 141140000 21184 1815;1951 19337 178048;178049;178050;178051;178052;178053;178054;178055;178056;178057 141852;141853;141854;141855;141856 141854 4 GYSGISLETLK Unmodified 1166.6183 0.61830402 1456 P42357 HAL Histidine ammonia-lyase yes yes 0 0 0 By MS/MS 10 0 1 1 72.047 71.445 2 0.012101 82973 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 83.309 55.227 38712000 0 0 0 38712000 0 0 0 0 0 0 0 0 0 0 0 21185 1456 19338 178058 141857 141857 0 GYSHCVDVYIK Unmodified 1339.6231 0.62307182 160 O00471 EXOC5 Exocyst complex component 5 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 54.782 48.731 3 0.032512 66699 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 38.238 30.327 21286000 16897000 0 4388600 0 0 0 0 0 0 0 0 0 0 0 0 21186 160 19339 178059;178060 141858 141858 1 GYSLASLLAK Unmodified 1021.5808 0.5807963 4584 Q9NR09 BIRC6 Baculoviral IAP repeat-containing protein 6 yes yes 0 0 0 By MS/MS 2 0 1 1 89.201 81.07 2 0.024658 105386 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.679 41.682 5433300 5433300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21187 4584 19340 178061 141859 141859 1 GYSPTHREEEYGK Unmodified 1551.6954 0.69538514 78 CON__P20930;P20930 FLG Filaggrin yes no 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 2 24 1 1 2 2 2 2 2 2 2 2 2 2 2 2 14.202 14.083 3;4 0.00052243 13331 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 70.622 58.239 + 4667800000 48734000 0 21213000 896080000 244690000 239920000 168450000 429030000 141930000 408940000 366050000 760410000 398650000 294110000 249570000 21188 78 19341 178062;178063;178064;178065;178066;178067;178068;178069;178070;178071;178072;178073;178074;178075;178076;178077;178078;178079;178080;178081;178082;178083;178084;178085;178086;178087 141860;141861;141862;141863;141864;141865;141866;141867;141868;141869;141870;141871;141872;141873;141874;141875;141876;141877;141878 141876 9 GYSSLLK Unmodified 766.4225 0.42250475 1062 P17844 DDX5 Probable ATP-dependent RNA helicase DDX5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.133 42.31 2 0.03857 48168 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 69.432 30.214 304900000 0 0 0 14562000 15611000 25782000 20370000 16001000 15520000 24281000 35049000 35178000 34705000 26757000 41080000 21189 1062 19342 178088;178089;178090;178091;178092;178093;178094;178095;178096;178097;178098;178099 141879 141879 1 GYSVEEVYDLAK Unmodified 1371.6558 0.65581174 2456 Q14966 ZNF638 Zinc finger protein 638 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 79.012 78.023 2 0.0059635 90258 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 65.627 57.981 127700000 5733100 65802000 0 0 3494500 4221800 3272200 3576000 4791400 4978200 0 10417000 5560600 8010400 7846000 21190 2456 19343 178100;178101;178102;178103;178104;178105;178106;178107;178108;178109;178110;178111 141880;141881;141882;141883;141884;141885;141886;141887;141888;141889;141890 141881 11 GYTAEQVAAVK Unmodified 1135.5873 0.58733824 4734 Q9NXW2 DNAJB12 DnaJ homolog subfamily B member 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 2 1 38.269 38.153 2 0.0024336 42209 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 79.474 56.545 9620300 0 0 0 1442200 2103000 2611100 0 0 0 0 3463900 0 0 0 0 21191 4734 19344 178112;178113;178114;178115;178116;178117 141891;141892;141893;141894;141895 141892 5 GYTIPLDK Unmodified 905.48583 0.48583328 2320 Q13573 SNW1 SNW domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.82 3.56 3 8 1 1 1 1 1 1 2 1 1 1 56.652 53.624 2 0.0082674 61099 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 86.794 66.135 348350000 7586200 286380000 6219400 0 12764000 0 19165000 0 0 0 0 0 0 16240000 0 21192 2320 19345 178118;178119;178120;178121;178122;178123;178124;178125;178126;178127;178128 141896;141897;141898;141899;141900;141901;141902;141903;141904 141897 9 GYTISDSAPSRR Unmodified 1308.6422 0.64222736 1602 P49815 TSC2 Tuberin yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 27.257 27.471 3 0.0015598 29235 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 56.225 24.591 58761000 0 0 0 0 5701100 0 6923200 5829300 5289800 7413700 9454200 0 4704500 4693600 8751100 21193 1602 19346 178129;178130;178131;178132;178133;178134;178135;178136;178137 141905;141906;141907;141908;141909;141910;141911 141909 7 GYTLATTQVK Unmodified 1080.5815 0.58152458 3006 Q6ZRS2 SRCAP Helicase SRCAP yes yes 0 0 0 By MS/MS 2 0 1 1 46.314 40.866 2 0.024515 53223 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.621 47.839 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21194 3006 19347 178138 141912 141912 1 GYTLVEYETYK Unmodified 1364.65 0.64999808 5248 Q9Y5S9 RBM8A RNA-binding protein 8A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.76 3.47 3 2 12 2 2 1 1 1 1 2 1 1 2 1 1 1 67.868 66.391 2 4.7828E-10 81696 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 149.72 143.13 479900000 27288000 154590000 32907000 7859200 0 0 13350000 10453000 15103000 15883000 33486000 53898000 18419000 21905000 74760000 21195 5248 19348 178139;178140;178141;178142;178143;178144;178145;178146;178147;178148;178149;178150;178151;178152;178153;178154;178155 141913;141914;141915;141916;141917;141918;141919;141920;141921;141922;141923;141924;141925 141921 11 GYTNWAIGLSVADLIESMLK Unmodified 2180.1187 0.11874151 836 P07195 LDHB L-lactate dehydrogenase B chain yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 106.83 102.61 2 2.6145E-71 123485 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 177.88 166.27 18701000 0 18701000 0 0 0 0 0 0 0 0 0 0 0 0 0 21196 836 19349 178156;178157 141926;141927 141927 2 GYTSIFNMETQQR Unmodified 1573.7195 0.7194914 371 O43815 STRN Striatin yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 74.381 74.624 2 0.003145 85532 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.096 61.572 17027000 0 0 0 0 0 0 0 0 0 0 0 0 0 3941200 13086000 21197 371 19350 178158;178159 141928 141928 1 GYTTLQDEAIK Unmodified 1237.619 0.6190323 4530 Q9HD67 MYO10 Unconventional myosin-X yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 6 1 1 1 1 1 1 48.101 48.344 2 0.0016106 55114 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 84.213 71.423 25625000 0 0 0 0 4196500 0 0 0 0 0 5294800 4083300 6707300 5342600 0 21198 4530 19351 178160;178161;178162;178163;178164;178165 141929;141930;141931;141932 141932 4 GYVNNTTVAVK Unmodified 1164.6139 0.61388734 4709 Q9NWZ3 IRAK4 Interleukin-1 receptor-associated kinase 4 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 40.445 35.569 2 0.023045 46520 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.439 17.723 60975000 0 60975000 0 0 0 0 0 0 0 0 0 0 0 0 0 21199 4709 19352 178166;178167 141933 141933 1 GYVNSSSQIK Unmodified 1081.5404 0.54038805 2734 Q5JSH3 WDR44 WD repeat-containing protein 44 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 26.175 22.002 2 0.0038481 28705 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.439 66.703 749050000 24319000 720890000 3842500 0 0 0 0 0 0 0 0 0 0 0 0 21200 2734 19353 178168;178169;178170;178171 141934;141935;141936 141934 3 GYVPATIK Unmodified 847.48035 0.48035398 1449 P42226 STAT6 Signal transducer and activator of transcription 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 40.954 41.143 2 0.049796 45872 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 46.994 32.581 105660000 0 0 0 6058300 4797100 10946000 0 6352500 5379000 14599000 9540400 12220000 9511400 10987000 15265000 21201 1449 19354 178172;178173;178174;178175;178176;178177;178178;178179;178180;178181;178182 141937 141937 1 GYVQQGVYSR Unmodified 1155.5673 0.5672715 3440 Q8NF64 ZMIZ2 Zinc finger MIZ domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 31.712 31.875 2 0.0055824 33581 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 68.371 34.118 41283000 0 0 0 0 0 6753000 5259400 0 4808200 10877000 0 0 7329800 6254800 0 21202 3440 19355 178183;178184;178185;178186;178187;178188;178189 141938;141939;141940 141938 3 GYVTPVK Unmodified 762.42759 0.42759012 444 O60911;Q5NE16;P43235;P07711 CTSV;CTSL3P;CTSK;CTSL Cathepsin L2;Putative inactive cathepsin L-like protein CTSL3P;Cathepsin K;Cathepsin L1;Cathepsin L1 heavy chain;Cathepsin L1 light chain yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 25.287 25.445 2 0.027168 27274 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 77.748 60.822 192890000 0 0 0 119620000 7724600 0 11522000 14102000 6123000 0 9485700 14166000 0 10144000 0 21203 444 19356 178190;178191;178192;178193;178194;178195;178196;178197 141941;141942;141943 141943 3 GYVVPNVDLPPLCSSR Unmodified 1771.8927 0.89270474 3749 Q96B26 EXOSC8 Exosome complex component RRP43 yes yes 0 0 0 By MS/MS 10 0 1 1 85.007 85.186 2 0.0103 98380 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.847 27.432 4478800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4478800 21204 3749 19357 178198 141944 141944 1 GYVVRISGGNDK Unmodified 1263.6571 0.65714914 1909 P62753 RPS6 40S ribosomal protein S6 yes yes 0 0 1 By MS/MS 2 0 1 1 41.836 35.1 3 0.00012605 48469 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.739 66.994 84407000 84407000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21205 1909 19358 178199 141945 141945 1 GYWPSYNVPFHEK Unmodified 1622.7518 0.75177781 2934 Q6P4A8 PLBD1 Phospholipase B-like 1;Phospholipase B-like 1 chain A;Phospholipase B-like 1 chain B;Phospholipase B-like 1 chain C yes yes 0 0 0 By MS/MS 2 0 1 1 37.742 34.31 3 0.03678 43333 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 21.775 3.3623 2908800 0 0 2908800 0 0 0 0 0 0 0 0 0 0 0 0 21206 2934 19359 178200 141946 141946 1 GYYAAVEAK Unmodified 970.476 0.47599688 2540 Q15477 SKIV2L Helicase SKI2W yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 35.575 31.479 2 0.032454 40981 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.246 39.023 50154000 0 47216000 2937900 0 0 0 0 0 0 0 0 0 0 0 0 21207 2540 19360 178201;178202 141947 141947 1 GYYSPGIVSTR Unmodified 1198.5982 0.59823728 2189 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 50.705 50.786 2 0.00015988 58299 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 128.36 118.72 161930000 0 0 0 19185000 16280000 0 18124000 0 0 0 22425000 0 37601000 18370000 29950000 21208 2189 19361 178203;178204;178205;178206;178207;178208;178209;178210;178211 141948;141949;141950;141951;141952;141953;141954;141955;141956 141955 9 GYYSPYSVSGSGSTAGSR Unmodified 1781.7857 0.78565671 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 47.683 47.831 2 1.9465E-29 53507 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 111.79 93.168 70024000 0 0 0 4188900 5125200 5070400 4704300 6276800 4744000 7941300 6290300 11058000 0 4628000 9996100 21209 2501 19362 178212;178213;178214;178215;178216;178217;178218;178219;178220;178221;178222 141957;141958;141959;141960;141961;141962;141963;141964;141965;141966;141967 141965 11 HAAEGEIYTK Unmodified 1117.5404 0.54038805 3471 Q8TAG9 EXOC6 Exocyst complex component 6 yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 14.305 14.52 2 0.0066319 13618 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 64.42 43.449 24413000 0 0 0 0 1674100 1814500 0 0 1680100 2634000 3732100 3647300 3830000 2481000 2919800 21210 3471 19363 178223;178224;178225;178226;178227;178228;178229;178230;178231 141968;141969;141970;141971;141972 141970 5 HAAFVTPDQK Unmodified 1112.5615 0.56145784 917 P10244 MYBL2 Myb-related protein B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 24.57 23.805 2 1.0476E-10 34502 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 168.25 142.31 74897000 25410000 0 14045000 3226400 3141100 2926900 3491000 3007500 0 4449500 0 8059300 0 0 7141300 21211 917 19364 178232;178233;178234;178235;178236;178237;178238;178239;178240;178241 141973;141974;141975;141976;141977;141978;141979;141980;141981 141977 9 HAALQDIGK Unmodified 951.51378 0.51377937 5010 Q9ULX3 NOB1 RNA-binding protein NOB1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.921 22.126 2 0.0029212 22342 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 125.16 93.225 192020000 0 0 0 8759000 8641100 15327000 15621000 7949800 12043000 17984000 21818000 23564000 13052000 18112000 29148000 21212 5010 19365 178242;178243;178244;178245;178246;178247;178248;178249;178250;178251;178252;178253 141982;141983;141984;141985;141986;141987;141988;141989;141990;141991;141992;141993 141991 11 HAALSLSK Unmodified 825.47085 0.47085192 4322 Q9H0C8 ILKAP Integrin-linked kinase-associated serine/threonine phosphatase 2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 25.168 21.177 2 0.00016047 28871 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 157.58 84.255 148600000 1041500 73664000 73894000 0 0 0 0 0 0 0 0 0 0 0 0 21213 4322 19366 178254;178255;178256;178257;178258 141994;141995;141996;141997;141998;141999 141997 5 HAASDVDLEIESLLNQQSTK Unmodified 2197.0863 0.08625541 3141 Q86U44 METTL3 N6-adenosine-methyltransferase 70 kDa subunit yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 90.822 87.137 3 2.4337E-10 108458 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.969 62.047 16741000 0 15808000 932300 0 0 0 0 0 0 0 0 0 0 0 0 21214 3141 19367 178259;178260 142000;142001 142000 2 HAASTVQILGAEK Unmodified 1323.7147 0.71466402 5125 Q9Y2X3 NOP58 Nucleolar protein 58 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 7.71 3.61 4 10 2 2 1 1 1 1 1 1 2 1 1 42.308 40.822 2;3 3.9411E-09 58062 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 111.79 90.397 157000000 72811000 0 13960000 0 4009500 0 3777400 3551100 4891600 8417200 9044400 21427000 8423000 6689800 0 21215 5125 19368 178261;178262;178263;178264;178265;178266;178267;178268;178269;178270;178271;178272;178273;178274 142002;142003;142004;142005;142006;142007;142008;142009;142010;142011 142006 7 HAAVALGQAR Unmodified 992.55156 0.55156186 5015 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 17.602 17.976 2 0.015412 16805 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 50.127 33.833 7230200 0 0 0 0 0 0 0 0 0 0 0 0 1807400 1396900 4025900 21216 5015 19369 178275;178276;178277 142012 142012 1 HAAVLVETIK Unmodified 1079.6339 0.63389451 456 O75122 CLASP2 CLIP-associating protein 2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 41.928 42.67 2 0.0067198 46676 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.207 26.047 5066100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5066100 21217 456 19370 178278;178279 142013;142014 142014 2 HADHSSLTLGSGSSTTR Unmodified 1712.8078 0.80778914 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 2 1 1 1 22.062 22.345 3 2.8276E-14 23154 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 73.279 64.895 171070000 0 0 0 6075200 0 21283000 8255100 884670 10107000 17033000 21784000 31358000 10405000 19145000 24739000 21218 3119 19371 178280;178281;178282;178283;178284;178285;178286;178287;178288;178289;178290;178291 142015;142016;142017;142018;142019;142020;142021;142022;142023;142024;142025;142026;142027;142028 142025 13 HADIVTTTTHK Unmodified 1222.6306 0.63060004 1336 P34897 SHMT2 Serine hydroxymethyltransferase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 5 3.71 8 3 6 3 5 3 1 1 1 1 1 1 14.192 12.32 2;3 2.9294E-12 18284 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 155.06 124.89 2140500000 1188200000 79673000 811420000 2040000 0 0 0 2874000 0 0 7762000 9799000 3855700 0 34823000 21219 1336 19372 178292;178293;178294;178295;178296;178297;178298;178299;178300;178301;178302;178303;178304;178305;178306;178307;178308 142029;142030;142031;142032;142033;142034;142035;142036;142037;142038;142039;142040 142034 9 HADYIASYGSK Unmodified 1210.5619 0.56185177 1719 P53611 RABGGTB Geranylgeranyl transferase type-2 subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 5 3.79 6 1 4 2 3 2 1 1 1 1 31.835 29.029 2;3 1.2547E-29 38210 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 237.51 188.09 1134700000 178180000 547080000 290350000 0 0 0 0 0 0 0 25801000 35336000 0 18801000 39138000 21220 1719 19373 178309;178310;178311;178312;178313;178314;178315;178316;178317;178318;178319 142041;142042;142043;142044;142045;142046;142047;142048;142049;142050;142051;142052;142053;142054;142055;142056;142057 142041 16 HAEATLGSGNLR Unmodified 1224.6211 0.62109799 3060 Q9H8S9;Q7L9L4 MOB1A;MOB1B MOB kinase activator 1A;MOB kinase activator 1B yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 1 2 1 2 1 2 1 2 2 2 2 24.644 24.896 2;3 1.5546E-05 25428 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 125.48 105.7 241400000 0 0 0 8651900 5067700 30398000 9066700 19836000 5217800 26280000 5672900 37746000 19970000 19206000 54283000 21221 3060 19374 178320;178321;178322;178323;178324;178325;178326;178327;178328;178329;178330;178331;178332;178333;178334;178335;178336;178337;178338 142058;142059;142060;142061;142062;142063;142064;142065;142066;142067;142068;142069;142070 142069 11 HAEELAAQK Unmodified 995.50361 0.50360861 412 O60563 CCNT1 Cyclin-T1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.65 2.93 2 1 14 2 1 2 1 1 2 1 1 1 2 1 1 1 7.539 7.2011 2 2.4673E-08 8306 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 185.55 128.37 239740000 0 181360000 18289000 4387000 3240300 3695600 5018800 4565100 4150200 0 0 4202000 5315500 5525200 0 21222 412 19375 178339;178340;178341;178342;178343;178344;178345;178346;178347;178348;178349;178350;178351;178352;178353;178354;178355 142071;142072;142073;142074;142075;142076;142077;142078;142079;142080;142081;142082;142083;142084 142081 13 HAEELER Unmodified 882.41954 0.41954463 4895 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 6.6937 6.8192 2 0.024937 4745 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 81.784 72.313 43435000 0 0 0 5343100 0 7772300 6669200 0 6433500 3401600 0 0 5685400 3415500 4714100 21223 4895 19376 178356;178357;178358;178359;178360;178361;178362;178363;178364 142085;142086;142087 142086 3 HAEELERLCESNRVDAK Unmodified 2054.9804 0.98035055 4895 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 yes yes 0 0 2 By MS/MS 2 0 1 1 44.314 37.448 4 0.020831 51513 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 25.558 15.645 23420000 23420000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21224 4895 19377 178365 142088 142088 1 HAELIASTFVDQCK Unmodified 1617.7821 0.78209166 4831 Q9UBB4 ATXN10 Ataxin-10 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 63.982 64.196 3 0.033096 73267 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 27.028 20.447 22873000 0 0 0 0 0 8691500 0 0 0 0 0 14182000 0 0 0 21225 4831 19378 178366;178367 142089 142089 0 HAEMVHTGLK Unmodified 1121.5652 0.56516301 2055 Q01518 CAP1 Adenylyl cyclase-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 6 4 3 3 1 1 1 1 1 1 19.965 18.183 2 1.6995E-37 27540 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 207.68 165.39 299250000 243860000 11207000 33036000 0 0 0 0 0 0 0 1777400 0 0 1333300 8031700 21226 2055 19379 178368;178369;178370;178371;178372;178373 142090;142091;142092;142093;142094 142092 5 HAEMVHTGLK Oxidation (M) 1137.5601 0.56007764 2055 Q01518 CAP1 Adenylyl cyclase-associated protein 1 yes yes 0 1 0 By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 5.06 3.95 1 10 7 4 2 5 1 1 1 1 1 1 1 17.655 16.26 2;3 6.1538E-06 12086 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 143.03 108.21 2018100000 1378900000 18797000 584680000 4521600 1959400 0 0 0 0 0 299560 9249200 3718900 4104200 11812000 21227 2055 19379 178374;178375;178376;178377;178378;178379;178380;178381;178382;178383;178384;178385;178386;178387;178388;178389;178390;178391 142095;142096;142097;142098;142099;142100;142101;142102;142103;142104;142105;142106 142101 3342 9 HAEPLTDTGSETPTAR Unmodified 1681.7907 0.79074209 3189 Q86X53 ERICH1 Glutamate-rich protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.83 2.61 1 5 1 1 1 1 1 1 30.373 29.368 3 0.00016513 32387 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 53.924 45.948 25969000 0 1835300 0 8599100 4406700 0 4661300 0 6466300 0 0 0 0 0 0 21228 3189 19380 178392;178393;178394;178395;178396;178397 142107;142108;142109;142110;142111;142112;142113 142113 6 HAETSSGGQAASSHEQAR Unmodified 1809.799 0.79901537 78 CON__P20930;P20930 FLG Filaggrin yes no 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 5.5727 5.6854 3 8.5003E-39 3567 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 136.34 124.43 + 85792000 0 0 0 6450800 4871500 5874200 3692900 9759500 0 14716000 7998700 14464000 5901500 4060600 8003000 21229 78 19381 178398;178399;178400;178401;178402;178403;178404;178405;178406;178407;178408 142114;142115;142116;142117;142118;142119;142120 142120 5 HAETSSGGQAASSQEQAR Unmodified 1800.7987 0.79868102 78 CON__P20930;P20930 FLG Filaggrin yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.1867 6.3072 3 6.8258E-27 4343 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 110.12 105.57 + 52589000 0 0 0 4832500 2826200 3516300 2954600 5363600 2519000 4055500 6839600 9351700 4982300 2449100 2899100 21230 78 19382 178409;178410;178411;178412;178413;178414;178415;178416;178417;178418;178419;178420 142121;142122;142123;142124;142125;142126;142127;142128;142129;142130;142131;142132 142130 12 HAEYSVILQEK Unmodified 1315.6772 0.67721588 3540 Q8WUB8 PHF10 PHD finger protein 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.42 3.66 3 1 8 2 1 1 1 1 1 1 1 1 1 1 52.416 49.866 2;3 4.918E-08 54385 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 171.85 171.85 106030000 17563000 4984200 13838000 0 0 0 6873100 0 0 0 12220000 20465000 10578000 0 19509000 21231 3540 19383 178421;178422;178423;178424;178425;178426;178427;178428;178429;178430;178431;178432 142133;142134;142135;142136;142137;142138;142139;142140;142141;142142;142143;142144;142145 142135 13 HAGPIVSVWHR Unmodified 1257.6731 0.67307398 4569 Q9NQG5 RPRD1B Regulation of nuclear pre-mRNA domain-containing protein 1B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 2 1 1 1 1 46.891 47.205 3 0.0047972 51275 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.164 41.164 173150000 0 0 0 0 0 34799000 0 46928000 15323000 39065000 0 14892000 0 0 22146000 21232 4569 19384 178433;178434;178435;178436;178437;178438;178439 142146;142147;142148;142149;142150 142147 5 HAGTEVELEK Unmodified 1111.551 0.55095274 3111 Q7Z6E9 RBBP6 E3 ubiquitin-protein ligase RBBP6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.17 3.85 2 1 3 2 1 1 1 1 21.818 20.028 2 0.012177 20329 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 52.937 22.77 35017000 0 17659000 3557700 0 0 4247600 0 5079800 0 4472500 0 0 0 0 0 21233 3111 19385 178440;178441;178442;178443;178444;178445 142151;142152;142153;142154;142155;142156 142155 5 HAHSSSLQQAASR Unmodified 1378.6702 0.67017345 659 O95425 SVIL Supervillin yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 7.7202 7.8819 3 4.1885E-08 6369 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 77.597 73.031 25203000 0 0 0 0 0 1747500 1435900 0 1659900 2602900 7363000 5417000 2402300 2574800 0 21234 659 19386 178446;178447;178448;178449;178450;178451;178452;178453 142157;142158 142158 2 HAHSVNF Unmodified 810.37729 0.37728589 3865 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 20.664 16.954 2 0.021385 21449 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 109.94 109.94 339980000 163050000 12407000 164520000 0 0 0 0 0 0 0 0 0 0 0 0 21235 3865 19387 178454;178455;178456 142159;142160 142160 2 HAIPIIK Unmodified 790.50651 0.50650915 170 O00571;O15523 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 39.55 38.104 2 0.014419 54805 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 120.76 72.514 1726600000 528290000 70159000 232000000 60752000 56542000 75888000 62381000 53077000 44141000 84618000 67644000 109540000 91111000 73457000 117050000 21236 170 19388 178457;178458;178459;178460;178461;178462;178463;178464;178465;178466;178467;178468;178469;178470;178471;178472;178473 142161;142162;142163;142164;142165;142166;142167;142168;142169;142170;142171;142172;142173;142174;142175;142176;142177;142178;142179 142170 15 HAIPNLVK Unmodified 890.53379 0.53378653 426 O60716 CTNND1 Catenin delta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37.625 36.711 2 0.010759 40139 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 78.616 43.723 614280000 247010000 43204000 36755000 17645000 15455000 25119000 20688000 21545000 14924000 31011000 26435000 28347000 22968000 22024000 41151000 21237 426 19389 178474;178475;178476;178477;178478;178479;178480;178481;178482;178483;178484;178485;178486;178487;178488 142180;142181;142182;142183;142184;142185;142186;142187;142188 142184 8 HAIPSAER Unmodified 879.45626 0.45626449 3640 Q92615 LARP4B La-related protein 4B yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 10.446 10.525 2 0.043141 8457 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.358 24.36 8478400 0 0 0 1630700 1153400 0 0 1313900 0 1324500 0 0 0 0 3055900 21238 3640 19390 178489;178490;178491;178492;178493 142189 142189 1 HALFPELPK Unmodified 1050.5862 0.58621603 3897 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68.445 67.725 2 0.00074227 91940 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 120.46 76.062 311800000 108370000 0 16685000 10532000 6695800 15944000 14170000 13822000 14042000 14925000 16880000 19304000 17723000 14790000 27912000 21239 3897 19391 178494;178495;178496;178497;178498;178499;178500;178501;178502;178503;178504;178505;178506;178507 142190;142191;142192;142193;142194;142195;142196;142197;142198;142199;142200;142201;142202;142203 142195 14 HALGQYVQAFR Unmodified 1288.6677 0.66765425 5245 Q9Y5Q9 GTF3C3 General transcription factor 3C polypeptide 3 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 58.936 59.23 3 0.0063156 66319 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.625 31.112 20072000 0 0 0 0 0 4813100 0 753160 0 2204400 0 3319600 0 0 8982100 21240 5245 19392 178508;178509;178510;178511;178512 142204;142205 142205 2 HALIIYDDLSK Unmodified 1286.6871 0.68705229 1192 P25705 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.29 3.28 3 11 1 2 1 1 1 1 1 1 1 1 1 1 1 66.603 65.965 2 2.2607E-05 75282 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 142.43 114.69 71388000 5655600 0 0 4868800 3063500 6079200 4821900 7565400 4968100 8735700 7145400 4727100 8343500 5414100 0 21241 1192 19393 178513;178514;178515;178516;178517;178518;178519;178520;178521;178522;178523;178524;178525;178526 142206;142207;142208;142209;142210;142211;142212;142213;142214;142215;142216;142217;142218;142219;142220;142221;142222 142214 17 HALLDVTPK Unmodified 992.56548 0.56548059 4867 Q9UDY2 TJP2 Tight junction protein ZO-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 45.371 43.721 2 0.0073568 58808 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.162 55.517 298370000 90436000 30394000 90653000 6915200 6010600 0 11075000 7592400 0 13047000 9948900 0 10552000 9502700 12244000 21242 4867 19394 178527;178528;178529;178530;178531;178532;178533;178534;178535;178536;178537;178538;178539;178540 142223;142224;142225;142226;142227;142228;142229;142230;142231;142232;142233;142234 142225 10 HAPDVVLDTLEQVK Unmodified 1562.8304 0.83042206 3110 Q7Z6B7 SRGAP1 SLIT-ROBO Rho GTPase-activating protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 85.39 77.259 3 0.016219 100934 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 36.77 25.535 5223500 5223500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21243 3110 19395 178541 142235 142235 1 HAPINSAQHLDNVDQTGPK Unmodified 2040.9977 0.99771517 300 O43159 RRP8 Ribosomal RNA-processing protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 35.434 33.943 3 7.2063E-06 47225 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.854 72.484 28090000 11624000 0 4009400 0 0 0 2493100 0 0 0 3782500 0 3170200 3010500 0 21244 300 19396 178542;178543;178544;178545;178546;178547 142236;142237 142236 2 HAPLADQILAGNAVR Unmodified 1544.8423 0.84232415 2354 Q13895 BYSL Bystin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 66.181 66.338 3 0.0099574 76208 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 35.037 11.205 104180000 0 0 0 0 5813300 9968100 0 5941100 6372400 10356000 9953500 19301000 0 11614000 24861000 21245 2354 19397 178548;178549;178550;178551;178552;178553;178554;178555;178556 142238 142238 1 HAPVLELEGK Unmodified 1091.5975 0.597509 1408 P40123 CAP2 Adenylyl cyclase-associated protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 44.64 43.107 2 8.4107E-05 61240 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 122.28 84.732 1169000000 299410000 495990000 256780000 4846200 4503700 13805000 6490800 5846800 4796000 12482000 16688000 0 0 16738000 30646000 21246 1408 19398 178557;178558;178559;178560;178561;178562;178563;178564;178565;178566;178567;178568;178569;178570 142239;142240;142241;142242;142243;142244;142245;142246 142244 7 HAQPPPIPVQNDPELYEK Unmodified 2071.0375 0.037454724 5050 Q9UPN6 SCAF8 Protein SCAF8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 1 1 2 1 1 1 2 2 2 2 2 65.624 65.78 2;3 5.3485E-06 74801 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 70.335 66.494 402880000 0 0 0 16403000 27050000 25040000 26843000 32776000 27312000 35766000 36921000 55539000 29598000 39565000 50062000 21247 5050 19399 178571;178572;178573;178574;178575;178576;178577;178578;178579;178580;178581;178582;178583;178584;178585;178586;178587;178588 142247;142248;142249;142250;142251;142252;142253;142254;142255;142256;142257;142258;142259;142260;142261;142262;142263 142257 14 HAQQELK Unmodified 852.44537 0.44536545 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 1.1296 -2.1398 2 0.0275 1038 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 134.85 75.21 23240000 20442000 2798500 0 0 0 0 0 0 0 0 0 0 0 0 0 21248 643 19400 178589;178590 142264 142264 1 HAQTFGAK Unmodified 858.4348 0.43480077 2540 Q15477 SKIV2L Helicase SKI2W yes yes 0 0 0 By MS/MS 2 0 1 1 8.1098 4.8622 2 0.0025252 7183 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.85 75.037 57336000 0 57336000 0 0 0 0 0 0 0 0 0 0 0 0 0 21249 2540 19401 178591 142265 142265 1 HARPPDPPASAPPDSSSNSASQDTK Unmodified 2516.1528 0.15277185 2555 Q15642 TRIP10 Cdc42-interacting protein 4 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 2 1 2 2 1 1 1 25.872 26.152 3;4 1.5296E-07 27969 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 45.784 41.981 40388000 0 0 0 0 0 9566700 0 2872300 0 7210500 10180000 4571400 3192300 2794400 0 21250 2555 19402 178592;178593;178594;178595;178596;178597;178598;178599;178600;178601 142266;142267;142268;142269;142270;142271;142272;142273 142273 8 HASAPSHVQPSDSEK Unmodified 1575.7277 0.7277479 398 O60343 TBC1D4 TBC1 domain family member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 7.937 8.06 3 5.6162E-191 5535 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 197.47 177.72 220390000 0 0 0 7860300 7056000 12114000 7292100 8552200 0 17343000 67749000 24629000 22840000 25185000 19764000 21251 398 19403 178602;178603;178604;178605;178606;178607;178608;178609;178610;178611;178612 142274;142275;142276;142277;142278;142279;142280;142281;142282 142278 7 HASNMLGELR Oxidation (M) 1142.5502 0.55024123 3961 Q96QK1 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 23.708 24.004 2 0.025718 24017 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.352 23.576 14613000 0 0 0 0 0 1409700 0 1222200 0 1809800 2235600 0 0 0 7935500 21252 3961 19404 178613;178614;178615;178616;178617 142283 142283 1 HASPEDIK Unmodified 895.43995 0.43994572 474 O75190 DNAJB6 DnaJ homolog subfamily B member 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 2 1 1 1 8.9542 9.1069 2 0.0068497 6400 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.006 79.594 35577000 0 0 0 2386100 0 3417400 6282200 0 0 2638500 2179800 7164200 0 4658900 6849600 21253 474 19405 178618;178619;178620;178621;178622;178623;178624;178625;178626 142284;142285;142286;142287;142288;142289;142290;142291 142286 6 HASSGSFLPSANEHLK Unmodified 1680.822 0.82198264 570 O76003 GLRX3 Glutaredoxin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 45.012 44.33 3 3.621E-05 49203 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 58.817 44.053 246560000 9082900 0 0 0 0 0 16615000 14568000 0 41552000 21303000 29700000 16799000 0 96942000 21254 570 19406 178627;178628;178629;178630;178631;178632;178633;178634 142292;142293;142294;142295;142296;142297;142298;142299 142297 6 HASTYREAATNQAK Unmodified 1546.7488 0.7488177 493 O75398 DEAF1 Deformed epidermal autoregulatory factor 1 homolog yes yes 0 0 1 By MS/MS 2 0 1 1 11.055 7.1819 3 0.0015256 11509 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.219 47.553 18597000 18597000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21255 493 19407 178635 142300 142300 1 HASVLAESGINYDK Unmodified 1502.7365 0.73652168 3915 Q96L91 EP400 E1A-binding protein p400 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 2 48.598 47.173 2;3 0.0038773 59516 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 38.337 32.617 44332000 0 19007000 11160000 0 0 0 0 0 1298000 0 4211100 0 6109800 2546400 0 21256 3915 19408 178636;178637;178638;178639;178640;178641;178642 142301;142302;142303;142304 142302 3 HATIYPTEEELQAVQK Unmodified 1855.9316 0.93159267 3913 Q96KR1 ZFR Zinc finger RNA-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 63.689 62.634 2;3 1.5409E-38 71224 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 126.48 108.47 255730000 0 79762000 27554000 5468600 5324500 11581000 10598000 10725000 8012500 12607000 11748000 17934000 15398000 14274000 24745000 21257 3913 19409 178643;178644;178645;178646;178647;178648;178649;178650;178651;178652;178653;178654;178655;178656;178657;178658 142305;142306;142307;142308;142309;142310;142311;142312;142313;142314;142315;142316;142317;142318;142319;142320;142321;142322 142306 18 HATRIIDEVVNK Unmodified 1393.7678 0.76776223 693 O95816 BAG2 BAG family molecular chaperone regulator 2 yes yes 0 0 1 By MS/MS 2 0 1 1 55.175 47.067 3 0.0027549 64380 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.267 47.438 37223000 37223000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21258 693 19410 178659 142323;142324;142325 142324 3 HAVDGAVK Unmodified 795.4239 0.42390173 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 6.1281 3.0684 2 0.012113 4865 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 101.28 52.528 883530000 45931000 366900000 470690000 0 0 0 0 0 0 0 0 0 0 0 0 21259 3641 19411 178660;178661;178662;178663 142326;142327;142328;142329;142330 142330 4 HAVGDDAQFEMDI Oxidation (M) 1462.6035 0.60345859 2312 Q13542 EIF4EBP2 Eukaryotic translation initiation factor 4E-binding protein 2 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 63.16 57.824 2 0.020022 73961 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 50.034 41.029 44130000 0 44130000 0 0 0 0 0 0 0 0 0 0 0 0 0 21260 2312 19412 178664;178665 142331 142331 3774 1 HAYDLIQK Unmodified 986.51853 0.5185304 2167 Q08AM6 VAC14 Protein VAC14 homolog yes yes 0 0 0 By MS/MS 10 0 1 1 32.602 32.756 2 0.044396 35840 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 76.134 27.076 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21261 2167 19413 178666 142332 142332 1 HAYGDQYR Unmodified 1008.4413 0.44134271 552 O75874 IDH1 Isocitrate dehydrogenase [NADP] cytoplasmic yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 2 1 1 9.6996 9.914 2 0.030197 7414 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 55.676 50.821 29834000 0 0 0 466880 0 0 0 0 0 0 10509000 7882200 652230 10324000 0 21262 552 19414 178667;178668;178669;178670;178671;178672 142333;142334 142333 2 HAYGLGEHYNSVTR Unmodified 1602.7539 0.75390307 3359 Q8N6M0 OTUD6B OTU domain-containing protein 6B yes yes 0 0 0 By MS/MS 10 0 1 1 32.131 32.847 3 0.050352 34964 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 27.767 23.987 6742500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6742500 21263 3359 19415 178673 142335 142335 1 HCAHGSLEDPK Unmodified 1249.551 0.55096951 4129 Q9BSL1 UBAC1 Ubiquitin-associated domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 4 2 2 9.4336 6.4305 2;3 0.00054176 10666 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.649 69.925 50310000 36831000 0 13478000 0 0 0 0 0 0 0 0 0 0 0 0 21264 4129 19416 178674;178675;178676;178677 142336;142337;142338;142339 142338 3 HCDDDGRTENGALAPK Unmodified 1754.7642 0.76420976 1045 P17028 ZNF24 Zinc finger protein 24 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.064 14.227 3 0.00017463 12936 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.261 57.991 82928000 0 0 0 5885100 6598900 7472600 3630000 2339900 2984000 9963400 6997200 9547400 7727400 6082800 13699000 21265 1045 19417 178678;178679;178680;178681;178682;178683;178684;178685;178686;178687;178688;178689 142340;142341;142342;142343;142344;142345;142346;142347;142348;142349;142350;142351;142352 142344 13 HCDDSFTPQEK Unmodified 1362.551 0.55102909 1376 P36551 CPOX Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial yes yes 0 0 0 By MS/MS 2.5 0.5 2 2 4 22.956 19 2;3 0.0005322 25082 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.5 104.91 35151000 0 35151000 0 0 0 0 0 0 0 0 0 0 0 0 0 21266 1376 19418 178690;178691;178692;178693 142353;142354;142355;142356 142353 2 HCDEVGFNAEEAHNIVK Unmodified 1967.8796 0.87957387 1671 P51808 DYNLT3 Dynein light chain Tctex-type 3 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 53.054 53.129 3 1.09E-13 59294 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.949 61.423 33085000 0 0 0 0 1981800 0 2536900 0 0 0 0 0 0 0 28566000 21267 1671 19419 178694;178695;178696 142357;142358;142359 142359 3 HCEDGICTVTAGPK Unmodified 1543.6759 0.67591203 1096 P19838 NFKB1 Nuclear factor NF-kappa-B p105 subunit;Nuclear factor NF-kappa-B p50 subunit yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 37.717 32.872 2;3 0.015051 40497 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 37.594 32.889 72754000 0 72754000 0 0 0 0 0 0 0 0 0 0 0 0 0 21268 1096 19420 178697;178698;178699 142360;142361;142362 142362 2 HCGKPVPPDTAPCEILK Unmodified 1917.9441 0.94408839 1636 P50748 KNTC1 Kinetochore-associated protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 58.248 52.189 3 0.0055796 71270 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 44.045 31.554 17224000 14447000 0 2776700 0 0 0 0 0 0 0 0 0 0 0 0 21269 1636 19421 178700;178701 142363;142364;142365 142363 3 HCILDVSGNAIK Unmodified 1325.6762 0.67617003 2213 Q12959;Q15700 DLG1;DLG2 Disks large homolog 1;Disks large homolog 2 no no 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 63.973 57.941 3 0.01086 71602 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 48.004 37.999 10370000 5788500 0 4581200 0 0 0 0 0 0 0 0 0 0 0 0 21270 2213 19422 178702;178703 142366;142367 142367 1 HCIMQANAEYHQSILAK Oxidation (M) 2028.951 0.95096468 3549 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein yes yes 0 1 0 By MS/MS 2 0 1 1 48.762 40.936 3 8.3026E-27 56677 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 124.78 120.87 25185000 25185000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21271 3549 19423 178704 142368 142368 5044 1 HCIMQANAEYHQSILAK Unmodified 2012.9561 0.95605006 3549 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein yes yes 0 0 0 By MS/MS 2 0 1 1 61.34 53.085 3 6.0309E-08 72040 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 99.451 81.087 8834200 8834200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21272 3549 19423 178705 142369;142370 142370 2 HCIREGGQDVPSNK Unmodified 1595.7474 0.74743749 4270 Q9BZK7 TBL1XR1 F-box-like/WD repeat-containing protein TBL1XR1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 12.687 12.823 3 0.0012881 11098 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.754 43.276 35786000 0 0 0 4899600 2232800 0 3213200 0 2669000 3036600 0 8040600 3930400 2450600 5312900 21273 4270 19424 178706;178707;178708;178709;178710;178711;178712;178713;178714 142371;142372 142371 2 HCNGVDWR Unmodified 1042.4403 0.44029685 278 O15371 EIF3D Eukaryotic translation initiation factor 3 subunit D yes yes 0 0 0 By MS/MS 10 0 1 1 20.494 20.833 2 0.034336 21467 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 53.166 1.8206 17742000 0 0 0 0 0 0 0 0 0 0 0 0 17742000 0 0 21274 278 19425 178715 142373 142373 1 HCNMVLENVK Unmodified 1242.5849 0.58491218 1894 P62316 SNRPD2 Small nuclear ribonucleoprotein Sm D2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.144 36.324 2 0.00092926 40124 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 112.75 93.505 143070000 0 0 0 5938200 5146600 8151200 5575400 5851700 6856400 10031000 13555000 29188000 14701000 14601000 23479000 21275 1894 19426 178716;178717;178718;178719;178720;178721;178722;178723;178724;178725;178726;178727 142374;142375;142376;142377;142378;142379;142380;142381;142382;142383;142384;142385 142378 12 HCNMVLENVK Oxidation (M) 1258.5798 0.5798268 1894 P62316 SNRPD2 Small nuclear ribonucleoprotein Sm D2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.004 23.208 2 0.0032627 23972 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 70.908 57.215 70013000 0 0 0 4310000 3439800 3287100 2711000 3358100 2312800 7233100 5611100 16413000 8513100 4535000 8288700 21276 1894 19426 178728;178729;178730;178731;178732;178733;178734;178735;178736;178737;178738;178739 142386;142387;142388;142389;142390;142391 142389 3066 6 HCPSAVVPVELQK Unmodified 1462.7602 0.76023401 4762 Q9NZB2 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 60.953 54.906 3 0.019992 68178 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 47.712 33.081 17232000 6531700 0 10700000 0 0 0 0 0 0 0 0 0 0 0 0 21277 4762 19427 178740;178741 142392 142392 0 HCSQVDSVR Unmodified 1086.4876 0.48764097 2399 Q14247 CTTN Src substrate cortactin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.2053 7.329 2 0.0039613 5281 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 99.136 61.577 146270000 0 0 0 9333500 8406000 9376500 7377800 7919400 9505400 8104000 22755000 17122000 11952000 10596000 23818000 21278 2399 19428 178742;178743;178744;178745;178746;178747;178748;178749;178750;178751;178752;178753 142393;142394;142395;142396;142397;142398;142399;142400 142399 4 HCSQVDSVRGFGGK Unmodified 1532.7154 0.71540908 2399 Q14247 CTTN Src substrate cortactin yes yes 0 0 1 By MS/MS 2 0 1 1 34.149 27.917 3 1.6725E-31 39169 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 151.3 135.91 177160000 177160000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21279 2399 19429 178754 142401;142402 142401 2 HCTASTLPK Unmodified 1013.4964 0.49641475 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 11.044 11.154 2 0.036366 10114 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 45.718 25.436 24097000 0 0 0 1183100 996580 1621500 1942200 2461600 883390 0 0 3875800 3127100 2848100 5157200 21280 2361 19430 178755;178756;178757;178758;178759;178760;178761;178762;178763;178764 142403 142403 1 HDAATCFVDAGNAFK Unmodified 1622.7147 0.71474038 1750 P54920 NAPA Alpha-soluble NSF attachment protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 3.6 3.2 4 1 2 2 1 67.134 63.403 2;3 8.8115E-05 80965 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.494 88.109 110150000 0 85765000 18583000 0 0 0 0 0 0 0 0 0 0 0 5797300 21281 1750 19431 178765;178766;178767;178768;178769 142404;142405;142406;142407;142408 142404 4 HDCVGYVMK Unmodified 1107.4841 0.4841355 1670 P51784 USP11 Ubiquitin carboxyl-terminal hydrolase 11 yes yes 0 0 0 By MS/MS 2 0 1 1 32.242 28.971 2 0.024751 36676 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 116.73 96.205 5703100 0 0 5703100 0 0 0 0 0 0 0 0 0 0 0 0 21282 1670 19432 178770 142409 142409 0 HDDPALTLVAGLTSNKPTDK Unmodified 2092.08 0.08004782 2940 Q6P996 PDXDC1 Pyridoxal-dependent decarboxylase domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.46 3.82 1 3 9 2 1 1 1 1 1 1 1 1 1 1 1 83.279 82.595 3 1.065E-12 102400 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.958 90.981 168670000 30038000 55783000 2714100 0 0 6333000 0 3942700 4340400 8220100 5689000 8625900 4458100 5570700 32959000 21283 2940 19433 178771;178772;178773;178774;178775;178776;178777;178778;178779;178780;178781;178782;178783 142410;142411;142412;142413;142414;142415;142416;142417;142418;142419;142420;142421;142422 142416 12 HDDSSDNFCEADDIQSPEAEYVDLLLNPERYTGYK Unmodified 4104.7807 0.78071385 3866 Q96HE7 ERO1L ERO1-like protein alpha yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 97.663 91.842 4 3.1881E-209 116102 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 176.96 173.88 99576000 99576000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21284 3866 19434 178784;178785 142423;142424 142424 2 HDDVMAK Unmodified 814.36434 0.36433794 4011 Q99460 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 6.0427 2.6981 2 0.01448 4795 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.65 70.525 557820000 36595000 521230000 0 0 0 0 0 0 0 0 0 0 0 0 0 21285 4011 19435 178786;178787;178788 142425;142426 142425 2 HDDYLVMLK Oxidation (M) 1148.5536 0.55359527 5076 Q9Y224 C14orf166 UPF0568 protein C14orf166 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 52.121 52.334 2 0.0040876 57941 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.696 54.168 92043000 0 0 0 0 5205400 10072000 9609500 6292100 3808900 11063000 11666000 12582000 0 5977900 15766000 21286 5076 19436 178789;178790;178791;178792;178793;178794;178795;178796;178797;178798 142427;142428;142429;142430;142431;142432;142433;142434;142435 142430 6459 9 HDDYLVMLK Unmodified 1132.5587 0.55868065 5076 Q9Y224 C14orf166 UPF0568 protein C14orf166 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 66.197 66.467 2 0.0030483 75325 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.318 44.892 34979000 0 0 0 0 0 0 0 3542100 0 3782200 0 5655600 1318300 6597200 14084000 21287 5076 19436 178799;178800;178801;178802;178803;178804 142436;142437;142438;142439 142437 4 HDEEDYVEMK Unmodified 1293.5183 0.51833198 4435 Q9H7L9 SUDS3 Sin3 histone deacetylase corepressor complex component SDS3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 32.644 32.464 2 0.0014272 35797 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 91.867 41.26 69482000 0 2404400 0 2754000 2971800 3770900 4945100 2829900 2900500 6279800 7842200 8726300 7516200 5363200 11178000 21288 4435 19437 178805;178806;178807;178808;178809;178810;178811;178812;178813;178814;178815;178816;178817 142440;142441;142442;142443;142444;142445;142446;142447;142448;142449;142450;142451;142452 142440 13 HDEEDYVEMK Oxidation (M) 1309.5132 0.5132466 4435 Q9H7L9 SUDS3 Sin3 histone deacetylase corepressor complex component SDS3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.86 3.4 1 1 5 2 1 1 1 1 1 20.101 19.231 2 3.5348E-06 22444 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 146.69 142.28 53346000 0 26022000 0 0 0 6971300 3449900 0 0 0 5721200 6673100 0 0 4508700 21289 4435 19437 178818;178819;178820;178821;178822;178823;178824 142453;142454;142455;142456 142456 5883 4 HDELLAEHIK Unmodified 1203.6248 0.62478638 2860 Q68E01 INTS3 Integrator complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.87 3.56 1 2 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 1 42.693 42.111 3 0.0026338 95624 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 66.056 34.982 152510000 23175000 3949300 23641000 5820800 2993500 10696000 7217500 6637900 7978200 9520800 7901800 13390000 16494000 13099000 0 21290 2860 19438 178825;178826;178827;178828;178829;178830;178831;178832;178833;178834;178835;178836;178837;178838;178839 142457;142458;142459;142460;142461;142462;142463;142464;142465 142460 7 HDELTYF Unmodified 923.4025 0.40249759 772 P04080 CSTB Cystatin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 68.309 62.658 2 0.027023 80708 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.03 84.255 955410000 90037000 784450000 80919000 0 0 0 0 0 0 0 0 0 0 0 0 21291 772 19439 178840;178841;178842;178843 142466;142467;142468;142469 142466 4 HDENLYGPIVK Unmodified 1283.651 0.65100113 2978 Q6UW63 KDELC1 KDEL motif-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 53.752 48.884 2 0.00086927 63894 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.92 64.364 36140000 0 34041000 2098600 0 0 0 0 0 0 0 0 0 0 0 0 21292 2978 19440 178844;178845 142470;142471 142470 2 HDGEDVLGNK Unmodified 1082.4993 0.49925152 2388 Q14191 WRN Werner syndrome ATP-dependent helicase yes yes 0 0 0 By MS/MS 2 0 1 1 19.754 16.179 2 0.0019685 21324 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.3 95.315 14810000 0 14810000 0 0 0 0 0 0 0 0 0 0 0 0 0 21293 2388 19441 178846 142472 142472 1 HDGGSPSIK Unmodified 896.43519 0.4351947 2558 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 6.9831 4.2528 2 0.020033 6236 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 75.738 25.612 45622000 0 39840000 5781800 0 0 0 0 0 0 0 0 0 0 0 0 21294 2558 19442 178847;178848 142473 142473 1 HDGITVAVHK Unmodified 1075.5774 0.57744226 337 O43504 LAMTOR5 Ragulator complex protein LAMTOR5 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 25.476 22.469 2 0.012855 28579 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 71.379 43.161 2646800 0 0 2646800 0 0 0 0 0 0 0 0 0 0 0 0 21295 337 19443 178849;178850 142474;142475 142475 2 HDGSHEGTVYFK Unmodified 1375.6157 0.61567826 2582 Q15813 TBCE Tubulin-specific chaperone E yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 29.239 24.848 3 0.00017615 31145 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 86.014 79.316 83799000 26239000 12109000 45452000 0 0 0 0 0 0 0 0 0 0 0 0 21296 2582 19444 178851;178852;178853 142476;142477 142477 1 HDGTGGQSIYGDK Unmodified 1333.5899 0.58985744 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 17.792 14.253 3 0.0085195 18657 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 39.82 27.552 14152000 0 14152000 0 0 0 0 0 0 0 0 0 0 0 0 0 21297 1601 19445 178854;178855 142478 142478 0 HDGTGGQSIYGDKFEDENFDVK Unmodified 2457.0721 0.072061909 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 1 By MS/MS 2 0 2 2 71.271 63.004 3;4 3.1465E-10 83873 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.541 50.079 15861000 15861000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21298 1601 19446 178856;178857 142479;142480 142480 2 HDIEEAGK Unmodified 897.41921 0.41921028 5352 yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 1 2 10.363 7.7786 2 0.023989 10248 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 81.784 17.007 + 19040000 0 4157300 14883000 0 0 0 0 0 0 0 0 0 0 0 0 21299 5352 19447 178858;178859;178860 142481 142481 1 HDIPCHSK Unmodified 992.4498 0.4497989 2925 Q6P1X5 TAF2 Transcription initiation factor TFIID subunit 2 yes yes 0 0 0 By MS/MS 2 0 1 1 6.8554 3.4232 2 0.018872 6498 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 111.95 83.435 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21300 2925 19448 178861 142482 142482 1 HDLHVTSQQGSSEPVVQDLAQVVEEVIGVPQSFQK Unmodified 3813.9173 0.91734617 4070 Q99933 BAG1 BAG family molecular chaperone regulator 1 yes yes 0 0 0 By MS/MS 2 0 1 1 104.19 96.06 4 1.2198E-07 123437 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 39.507 35.314 7180400 7180400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21301 4070 19449 178862 142483 142483 0 HDLLTEPDLGVTIDLINPDTYRIDPNVLLDPADEK Unmodified 3928.9946 0.99459344 3366 Q8N7H5 PAF1 RNA polymerase II-associated factor 1 homolog yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 99.393 93.565 3;4 1.2309E-230 118236 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 195.01 186.61 28896000 28896000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21302 3366 19450 178863;178864 142484;142485 142485 2 HDLNPLIK Unmodified 948.53927 0.53926584 954 P11717 IGF2R Cation-independent mannose-6-phosphate receptor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 43.109 42.853 2 0.027369 55104 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 78.516 31.073 46833000 0 0 9199300 0 3533900 0 4751100 5289600 0 0 0 6693300 8232100 4205200 4928700 21303 954 19451 178865;178866;178867;178868;178869;178870;178871;178872 142486;142487;142488 142487 3 HDLPPYR Unmodified 896.45045 0.45045083 3308 Q8N163 CCAR2 Cell cycle and apoptosis regulator protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 23.088 23.383 2 0.046966 25584 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 65.672 53.241 50993000 0 0 0 0 0 3486600 2941500 3660000 2043000 5281800 4284300 6439400 6569100 5770800 10517000 21304 3308 19452 178873;178874;178875;178876;178877;178878;178879;178880;178881;178882 142489 142489 1 HDNLLHGTK Unmodified 1033.5305 0.53049207 1183 P25205 MCM3 DNA replication licensing factor MCM3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 13.975 10.761 2 0.0015074 16172 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 135.86 100.56 210570000 181080000 12168000 17320000 0 0 0 0 0 0 0 0 0 0 0 0 21305 1183 19453 178883;178884;178885 142490;142491 142490 2 HDPTSANLLQLVR Unmodified 1462.7892 0.78922595 4273 Q9BZL6 PRKD2 Serine/threonine-protein kinase D2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 2 1 77.49 77.597 3 0.00054252 89526 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 51.463 42.413 106600000 0 0 0 0 3663300 7830500 5696500 9722100 7310800 10166000 9666700 8077800 10294000 13854000 20322000 21306 4273 19454 178886;178887;178888;178889;178890;178891;178892;178893;178894;178895;178896;178897 142492;142493;142494;142495;142496;142497;142498;142499;142500;142501;142502 142493 11 HDSFVPCSEK Unmodified 1204.5183 0.5182724 5126 Q9Y2X7 GIT1 ARF GTPase-activating protein GIT1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25.965 25.047 2 0.0046139 26400 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 83.948 70.911 102780000 4754400 30737000 22653000 3228600 2194100 7004100 6031300 2787800 2199000 3294400 0 8582400 5919000 3394400 0 21307 5126 19455 178898;178899;178900;178901;178902;178903;178904;178905;178906;178907;178908;178909;178910;178911 142503;142504;142505;142506;142507;142508;142509;142510;142511;142512 142504 10 HDSGAADLER Unmodified 1069.4789 0.47885043 4716 Q9NX55 HYPK Huntingtin-interacting protein K yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 2 2 1 1 2 1 1 1 11.083 11.232 2 2.0913E-101 8880 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 213.53 179.44 1355800000 0 0 0 5834900 11385000 13677000 92773000 78733000 79697000 148530000 199130000 701840000 0 5749600 18405000 21308 4716 19456 178912;178913;178914;178915;178916;178917;178918;178919;178920;178921;178922;178923;178924;178925 142513;142514;142515;142516;142517;142518;142519;142520 142516 6 HDSGAADLERVTDYAEEK Unmodified 2004.9025 0.90247738 4716 Q9NX55 HYPK Huntingtin-interacting protein K yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.58 3.64 7 1 18 3 3 2 2 3 3 3 4 3 61.172 60.019 3;4 4.7501E-128 67413 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 199.99 172.73 758030000 213850000 164910000 51026000 0 0 0 8432600 36226000 27334000 45155000 72424000 138670000 0 0 0 21309 4716 19457 178926;178927;178928;178929;178930;178931;178932;178933;178934;178935;178936;178937;178938;178939;178940;178941;178942;178943;178944;178945;178946;178947;178948;178949;178950;178951 142521;142522;142523;142524;142525;142526;142527;142528;142529;142530;142531;142532;142533;142534;142535;142536;142537;142538;142539;142540;142541;142542;142543;142544;142545;142546 142541 25 HDSIPAADTFEDLSDVEGGGSEPTQRDAGSRDEK Unmodified 3587.5884 0.58842005 678 O95671 ASMTL N-acetylserotonin O-methyltransferase-like protein yes yes 0 0 2 By MS/MS 2 0 2 2 78.178 70.048 4;5 5.6548E-104 92042 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 129.01 127.22 72811000 72811000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21310 678 19458 178952;178953 142547;142548;142549;142550 142548 4 HDSSTVEVQDDHIK Unmodified 1608.738 0.73797824 2688 Q4LE39 ARID4B AT-rich interactive domain-containing protein 4B yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 22.109 22.358 3 0.0036169 23467 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 26.858 15.09 67892000 0 0 0 0 4162100 2612000 2807700 0 2478100 0 12634000 15659000 12185000 0 15355000 21311 2688 19459 178954;178955;178956;178957;178958;178959;178960;178961 142551;142552;142553 142553 3 HDSYIPCSER Unmodified 1262.535 0.5349851 2382 Q14161 GIT2 ARF GTPase-activating protein GIT2 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 26.061 26.558 2 0.0062946 28394 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 75.378 66.515 6972600 0 0 0 0 0 0 0 0 0 0 2496900 0 2442800 0 2032800 21312 2382 19460 178962;178963;178964 142554 142554 1 HDTAAVDRSVK Unmodified 1197.6102 0.61019895 4459 Q9H900 ZWILCH Protein zwilch homolog yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 9.199 6.2481 3 0.013295 8370 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 89.171 71.362 100960000 0 31232000 69731000 0 0 0 0 0 0 0 0 0 0 0 0 21313 4459 19461 178965;178966;178967 142555;142556 142555 0 HDVGAYMLMYK 2 Oxidation (M) 1358.5999 0.59989354 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.87 6 10 3 1 2 1 1 1 1 1 1 1 1 1 1 45.6 43.615 2;3 0.0008318 59774 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.033 88.676 185710000 55107000 0 47891000 4315500 3182700 9292800 0 0 5154400 7316500 9141100 17879000 7575200 10763000 8093200 21314 1986 19462 178968;178969;178970;178971;178972;178973;178974;178975;178976;178977;178978;178979;178980;178981;178982;178983 142557;142558;142559;142560;142561;142562;142563;142564 142560 3216;3217 7 HDVGAYMLMYK Unmodified 1326.6101 0.6100643 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 4.67 3.77 4 2 3 1 1 1 73.163 68.702 2;3 7.3284E-17 90579 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 174.41 139.11 127050000 106450000 0 4599100 0 0 0 0 0 0 0 0 0 0 3850200 12147000 21315 1986 19462 178984;178985;178986;178987;178988;178989 142565;142566;142567;142568;142569 142566 4 HDVGAYMLMYK Oxidation (M) 1342.605 0.60497892 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 11 5 2 4 63.646 57.182 2;3 1.555E-08 80238 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 175.91 144.15 229900000 155520000 39604000 34774000 0 0 0 0 0 0 0 0 0 0 0 0 21316 1986 19462 178990;178991;178992;178993;178994;178995;178996;178997;178998;178999;179000 142570;142571;142572;142573;142574;142575;142576 142574 3216;3217 6 HDVLLATLK Unmodified 1008.5968 0.59678072 4284 Q9C0B7 TANGO6 Transport and Golgi organization protein 6 homolog yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 66.838 59.732 2 0.012516 79887 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.948 38.866 40335000 28730000 11605000 0 0 0 0 0 0 0 0 0 0 0 0 0 21317 4284 19463 179001;179002 142577 142577 1 HDVNLGR Unmodified 809.4144 0.41439968 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 10.373 10.468 2 0.039725 8137 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.915 16.232 38007000 0 0 0 0 3825600 6881800 4938200 0 0 0 0 11366000 0 0 10996000 21318 2930 19464 179003;179004;179005;179006;179007 142578 142578 1 HDVVFLITK Unmodified 1070.6124 0.61243078 2040 Q00610 CLTC Clathrin heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.63 1 2 1 10 2 1 1 1 1 1 1 1 1 1 1 1 1 70.813 70.249 2 0.00038261 84503 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 126.07 101.14 820070000 382220000 5266200 220900000 0 0 16620000 7870100 10055000 9153000 21994000 16462000 29420000 13149000 19222000 67745000 21319 2040 19465 179008;179009;179010;179011;179012;179013;179014;179015;179016;179017;179018;179019;179020;179021 142579;142580;142581;142582;142583;142584;142585;142586;142587;142588;142589;142590;142591;142592 142587 12 HEAEVTNYK Unmodified 1089.5091 0.50908792 4077 Q99996 AKAP9 A-kinase anchor protein 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 11.377 10.983 2 0.00075194 13914 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.31 96.351 44172000 0 28819000 2570400 761000 0 1141000 1133900 763240 758750 0 0 1674700 1932300 1793100 2824600 21320 4077 19466 179022;179023;179024;179025;179026;179027;179028;179029;179030;179031;179032 142593;142594;142595 142593 3 HEAFESDLAAHQDR Unmodified 1624.723 0.72299688 356;971;1359 O43707;P12814;P35609 ACTN4;ACTN1;ACTN2 Alpha-actinin-4;Alpha-actinin-1;Alpha-actinin-2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 32.783 33.07 3 8.5069E-14 34779 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 111.83 101.48 172340000 0 0 0 10804000 0 13013000 0 0 0 8925600 24685000 20095000 7051000 16356000 71415000 21321 356;971;1359 19467 179033;179034;179035;179036;179037;179038;179039;179040 142596;142597;142598;142599;142600;142601;142602;142603 142598 7 HEAFESDLAAHQDRVEQIAAIAQELNELDYYDSHNVNTR Unmodified 4511.1014 0.10141156 356 O43707 ACTN4 Alpha-actinin-4 yes yes 0 0 1 By MS/MS 2.25 0.433 3 1 4 97.216 90.242 4;5;6 1.4504E-224 115347 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 169.94 166.09 194920000 194920000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21322 356 19468 179041;179042;179043;179044 142604;142605;142606;142607 142605 3 HEAFETDFTVHK Unmodified 1459.6732 0.67319314 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By matching 2 0 3 1 1 1 54.905 48.854 3 0.019435 67143 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 29.55 16.919 10554000 5089100 0 5464500 0 0 0 0 0 0 0 0 0 0 0 0 21323 2344 19469 179045;179046;179047 142608;142609 142609 2 HEAISSQESK Unmodified 1114.5255 0.52546627 5219 Q9Y546 LRRC42 Leucine-rich repeat-containing protein 42 yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 6.3338 3.6035 2 3.421E-06 5424 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 147.75 104.63 145760000 0 132520000 13240000 0 0 0 0 0 0 0 0 0 0 0 0 21324 5219 19470 179048;179049 142610 142610 1 HEAMITDLEER Oxidation (M) 1358.6136 0.61362935 1356 P35579 MYH9 Myosin-9 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.84 1.13 1 48 1 3 4 5 4 4 4 4 4 4 4 4 4 36.862 36.976 2;3 2.272E-21 41305 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 169.93 151.15 1785200000 0 0 3601600 115310000 127550000 160360000 126330000 104570000 149690000 162720000 161170000 198230000 190580000 142550000 142510000 21325 1356 19471 179050;179051;179052;179053;179054;179055;179056;179057;179058;179059;179060;179061;179062;179063;179064;179065;179066;179067;179068;179069;179070;179071;179072;179073;179074;179075;179076;179077;179078;179079;179080;179081;179082;179083;179084;179085;179086;179087;179088;179089;179090;179091;179092;179093;179094;179095;179096;179097;179098 142611;142612;142613;142614;142615;142616;142617;142618;142619;142620;142621;142622;142623;142624;142625;142626;142627;142628;142629;142630;142631;142632;142633;142634;142635;142636;142637;142638;142639;142640;142641;142642;142643 142626 2077 19 HEAMITDLEER Unmodified 1342.6187 0.61871473 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 25 2 2 2 2 2 2 2 2 2 2 2 3 48.008 48.193 2;3 1.5574E-15 52868 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 200.78 154.76 1659000000 0 0 0 76914000 60387000 155000000 80915000 104920000 111650000 157390000 191030000 183930000 148770000 142240000 245870000 21326 1356 19471 179099;179100;179101;179102;179103;179104;179105;179106;179107;179108;179109;179110;179111;179112;179113;179114;179115;179116;179117;179118;179119;179120;179121;179122;179123 142644;142645;142646;142647;142648;142649;142650;142651;142652;142653;142654;142655;142656;142657;142658;142659;142660;142661;142662;142663;142664;142665 142649 18 HEANNPQLK Unmodified 1049.5254 0.52540669 1313 P31948 STIP1 Stress-induced-phosphoprotein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching 7.06 3.8 5 1 10 1 3 2 1 1 1 1 1 1 1 1 1 1 7.3634 6.3293 2 1.6581E-06 7477 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 193.41 153.14 4626600000 196120000 3800400000 559440000 0 2786700 3321600 4303800 3568400 4366200 2989800 12330000 7515600 0 7450400 22036000 21327 1313 19472 179124;179125;179126;179127;179128;179129;179130;179131;179132;179133;179134;179135;179136;179137;179138;179139 142666;142667;142668;142669;142670;142671;142672;142673;142674 142668 6 HEAPSSPISGQPCGDDQNASPSK Unmodified 2365.0241 0.024065859 488 O75376 NCOR1 Nuclear receptor corepressor 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 35.478 30.783 3 0.020024 40403 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 23.123 8.3485 11809000 0 11809000 0 0 0 0 0 0 0 0 0 0 0 0 0 21328 488 19473 179140;179141 142675;142676 142675 1 HEAQRLEQEAR Unmodified 1365.6749 0.67492447 2444 Q14764 MVP Major vault protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 12.025 12.322 3 0.00030752 10663 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 84.658 42.954 36982000 0 0 0 0 0 0 0 0 0 0 0 14598000 5362800 5103200 11919000 21329 2444 19474 179142;179143;179144;179145 142677;142678;142679;142680 142680 3 HEARPLAELR Unmodified 1190.652 0.65200419 1253 P29590 PML Protein PML yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 28.953 29.196 3 0.029645 31191 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 38.783 19.679 104990000 0 0 0 0 0 0 9096400 13558000 17329000 0 15448000 0 26707000 22855000 0 21330 1253 19475 179146;179147;179148;179149;179150;179151 142681;142682;142683 142683 1 HEASEIQIK Unmodified 1053.5455 0.54547343 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22.851 22.428 2 1.1568E-05 23219 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 154.49 110.68 296330000 0 17184000 4623400 14232000 18068000 22827000 20184000 20958000 27524000 28511000 31949000 29090000 33935000 27248000 0 21331 2556 19476 179152;179153;179154;179155;179156;179157;179158;179159;179160;179161;179162;179163;179164;179165 142684;142685;142686;142687;142688;142689;142690;142691;142692;142693;142694;142695;142696 142686 12 HECGAAFTSK Unmodified 1106.4815 0.48149296 2332;2331 Q13619;Q13620 CUL4A;CUL4B Cullin-4A;Cullin-4B no no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.42 3.66 3 1 8 1 2 1 1 1 1 1 1 1 2 12.051 11.117 2 0.0034666 14197 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 94.85 85.609 420770000 57809000 186860000 151230000 0 0 1907400 0 0 1592700 2624200 2152000 0 4067700 3832600 8696300 21332 2331;2332 19477 179166;179167;179168;179169;179170;179171;179172;179173;179174;179175;179176;179177 142697;142698;142699;142700;142701;142702;142703;142704;142705;142706 142703 8 HECMAPLTALVK Unmodified 1368.6894 0.68937725 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS 10 0 1 1 70.293 70.728 3 0.025783 80754 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 34.768 29.788 7409100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7409100 21333 1986 19478 179178 142707 142707 1 HECQANGPEDLNR Unmodified 1538.6532 0.65320275 1822 P60981 DSTN Destrin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 17.073 16.948 3 1.6181E-09 16375 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 90.861 82.16 87656000 0 4545200 0 4717600 2711500 4611800 3385800 1922200 3679200 2728500 10244000 14322000 6767400 9348400 18674000 21334 1822 19479 179179;179180;179181;179182;179183;179184;179185;179186;179187;179188;179189;179190;179191 142708;142709;142710;142711;142712;142713;142714;142715;142716;142717;142718;142719;142720 142718 11 HECQANGPEDLNRACIAEK Unmodified 2210.9797 0.97969862 1822 P60981 DSTN Destrin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.12 0.331 7 1 2 3 3 41.307 36.423 3;4 1.6363E-163 45638 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 231.52 218.11 1125300000 115520000 148940000 860850000 0 0 0 0 0 0 0 0 0 0 0 0 21335 1822 19480 179192;179193;179194;179195;179196;179197;179198;179199 142721;142722;142723;142724;142725;142726;142727;142728;142729;142730;142731 142728 9 HEDGDSNGTFFVYHAIYLEELTAVELTEK Unmodified 3326.5619 0.56191794 2192 Q12800 TFCP2 Alpha-globin transcription factor CP2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 100.22 94.386 4 2.5069E-22 119392 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.702 79.94 26739000 26739000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21336 2192 19481 179200;179201 142732;142733 142733 2 HEDGTQSDSEDPLAK Unmodified 1627.6962 0.696173 5200 Q9Y4F5 CEP170B Centrosomal protein of 170 kDa protein B yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 25.785 21.615 3 0.021518 28523 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 17.958 12.177 10122000 0 10122000 0 0 0 0 0 0 0 0 0 0 0 0 0 21337 5200 19482 179202;179203 142734;142735 142734 1 HEDHQVSDGALR Unmodified 1362.6276 0.62763993 5004 Q9ULT8 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 12.486 12.778 3 0.024528 10998 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.204 27.637 28938000 0 0 0 0 0 0 0 2112900 0 3975800 3968000 4818800 4474400 2564500 7023300 21338 5004 19483 179204;179205;179206;179207;179208;179209;179210 142736;142737;142738 142736 3 HEDLQTDESSMDDRHPR Unmodified 2066.8712 0.87119403 2987 Q6VN20 RANBP10 Ran-binding protein 10 yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 21.624 22.28 4 0.0034669 22329 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.382 33.218 13739000 0 0 0 0 0 0 0 0 0 0 0 3708000 0 0 10030000 21339 2987 19484 179211;179212 142739 142739 1 HEDTNLASSTIVK Unmodified 1413.71 0.70997257 1318 P32121 ARRB2 Beta-arrestin-2 yes yes 0 0 0 By MS/MS 2 0 1 1 42.323 37.228 2 7.2554E-25 48512 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 153.75 92.16 17587000 0 17587000 0 0 0 0 0 0 0 0 0 0 0 0 0 21340 1318 19485 179213 142740 142740 1 HEEAPGHRPTTNPNASK Unmodified 1841.8769 0.87687176 1123 P21291 CSRP1 Cysteine and glycine-rich protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.74 3.54 7 2 22 5 2 2 2 1 2 1 2 2 2 2 2 2 2 2 7.5439 6.6795 2;3;4 1.3585E-229 4266 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 193.27 169.43 7311000000 6008700000 52374000 176170000 12387000 9052600 17396000 3449300 17766000 15769000 27453000 211150000 87809000 21941000 167650000 481910000 21341 1123 19486 179214;179215;179216;179217;179218;179219;179220;179221;179222;179223;179224;179225;179226;179227;179228;179229;179230;179231;179232;179233;179234;179235;179236;179237;179238;179239;179240;179241;179242;179243;179244 142741;142742;142743;142744;142745;142746;142747;142748;142749;142750;142751;142752;142753;142754;142755;142756;142757;142758;142759;142760;142761;142762;142763;142764 142747 20 HEEEAVQK Unmodified 968.45632 0.45632407 4370 Q9H2M9 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS 3 0 2 1 1 2.5818 -0.88855 2 0.01212 1301 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 101.64 55.925 3684100 193180 3490900 0 0 0 0 0 0 0 0 0 0 0 0 0 21342 4370 19487 179245;179246 142765 142765 1 HEEGLNEDLAK Unmodified 1253.5888 0.58879481 4604 Q9NRH2 SNRK SNF-related serine/threonine-protein kinase yes yes 0 0 0 By MS/MS 2 0 1 1 33.099 28.565 2 0.018489 37329 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.652 50.093 6728800 0 6728800 0 0 0 0 0 0 0 0 0 0 0 0 0 21343 4604 19488 179247 142766 142766 1 HEEIDLVSLEEFYK Unmodified 1749.8461 0.8461317 2343 Q13769 THOC5 THO complex subunit 5 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 93.578 85.447 3 0.017399 110682 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.292 52.807 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21344 2343 19489 179248 142767 142767 1 HEEILQNLQK Unmodified 1250.6619 0.66190017 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.5 3.71 5 11 1 2 2 1 1 1 1 1 1 1 1 1 1 1 43.553 42.8 2;3 3.2846E-32 45962 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 182.76 107.03 195890000 193210 68958000 65305000 4219900 2785300 7405100 4280100 5523700 4444000 5930900 6038000 0 6130300 4754100 9920100 21345 1286 19490 179249;179250;179251;179252;179253;179254;179255;179256;179257;179258;179259;179260;179261;179262;179263;179264 142768;142769;142770;142771;142772;142773;142774;142775;142776;142777;142778 142771 8 HEELMLGDPCLK Unmodified 1440.6741 0.67412112 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.82 3.56 6 16 2 2 2 1 1 1 1 2 2 2 2 2 2 65.603 64.085 2;3 2.2323E-44 80191 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 201.75 170.32 464130000 26553000 232350000 58424000 0 2977700 8659600 0 4440600 4573500 10247000 17184000 17304000 18287000 16992000 46129000 21346 848 19491 179265;179266;179267;179268;179269;179270;179271;179272;179273;179274;179275;179276;179277;179278;179279;179280;179281;179282;179283;179284;179285;179286 142779;142780;142781;142782;142783;142784;142785;142786;142787;142788;142789;142790;142791;142792;142793;142794 142790 15 HEELMLGDPCLK Oxidation (M) 1456.669 0.66903574 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 7.79 3.51 6 2 20 2 3 3 2 2 2 2 2 2 1 1 1 2 2 1 58.216 56.711 2;3 3.9005E-07 64135 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 117.01 103.24 393950000 14039000 116170000 101530000 10652000 9949600 20022000 12593000 10813000 11106000 11321000 12161000 19481000 18803000 20705000 4611900 21347 848 19491 179287;179288;179289;179290;179291;179292;179293;179294;179295;179296;179297;179298;179299;179300;179301;179302;179303;179304;179305;179306;179307;179308;179309;179310;179311;179312;179313;179314 142795;142796;142797;142798;142799;142800;142801;142802;142803;142804;142805;142806;142807;142808;142809;142810;142811;142812;142813;142814 142811 1055 13 HEEQPAPGYDTHGR Unmodified 1592.6968 0.69678213 2136 Q07157 TJP1 Tight junction protein ZO-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 13.109 13.23 3 0.0022361 12421 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 47.532 34.395 21196000 0 0 0 2199600 1330500 1976900 1497400 0 1295100 2840300 0 3159100 2266700 1678200 2952700 21348 2136 19492 179315;179316;179317;179318;179319;179320;179321;179322;179323;179324 142815;142816 142815 2 HEEQSNEDIPIAEQSSK Unmodified 1939.8759 0.87592828 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 36.394 35.041 3 0.001919 37715 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.584 40.606 101690000 9224000 22378000 0 5425200 0 11153000 0 0 5635900 12613000 0 0 0 15664000 19599000 21349 2203 19493 179325;179326;179327;179328;179329;179330;179331;179332 142817;142818;142819;142820 142818 4 HEERQDEHGYISR Unmodified 1654.7448 0.74479495 786 P04792 HSPB1 Heat shock protein beta-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.86 1.06 1 55 1 4 4 4 6 3 5 4 8 5 4 3 5 13.106 13.205 3;4 2.1408E-40 9970 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 185.87 171.27 2313300000 30415000 0 0 51317000 14162000 86844000 35043000 42968000 65268000 63618000 162820000 488590000 196570000 142370000 933300000 21350 786 19494 179333;179334;179335;179336;179337;179338;179339;179340;179341;179342;179343;179344;179345;179346;179347;179348;179349;179350;179351;179352;179353;179354;179355;179356;179357;179358;179359;179360;179361;179362;179363;179364;179365;179366;179367;179368;179369;179370;179371;179372;179373;179374;179375;179376;179377;179378;179379;179380;179381;179382;179383;179384;179385;179386;179387;179388 142821;142822;142823;142824;142825;142826;142827;142828;142829;142830;142831;142832;142833;142834;142835;142836;142837;142838;142839;142840;142841;142842;142843;142844;142845;142846;142847;142848;142849;142850;142851;142852;142853;142854;142855;142856;142857;142858;142859;142860;142861;142862;142863;142864;142865;142866;142867;142868;142869;142870;142871;142872;142873;142874;142875;142876;142877;142878;142879;142880;142881;142882;142883;142884;142885;142886;142887;142888;142889;142890;142891 142878 62 HEFEDNK Unmodified 917.38791 0.38791015 3243 Q8IWR0 ZC3H7A Zinc finger CCCH domain-containing protein 7A yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 6.0996 3.3755 2 0.03416 5246 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.265 65.702 42969000 0 27597000 15372000 0 0 0 0 0 0 0 0 0 0 0 0 21351 3243 19495 179389;179390 142892 142892 1 HEFQAETK Unmodified 988.46141 0.46140945 2210 Q12931 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 8.7759 8.076 2 3.2074E-12 10980 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 197.3 167.11 325380000 15687000 115780000 117840000 5456500 3802100 4575800 3823000 4863800 3739300 5850000 15920000 9003400 6373300 3214000 9454400 21352 2210 19496 179391;179392;179393;179394;179395;179396;179397;179398;179399;179400;179401;179402;179403;179404;179405;179406 142893;142894;142895;142896;142897;142898;142899;142900;142901;142902;142903;142904;142905;142906;142907;142908;142909;142910;142911;142912;142913 142896 20 HEGFERDLAALGDK Unmodified 1556.7583 0.75831975 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS By MS/MS 2.2 0.748 1 2 2 3 2 73.17 69.392 3 0.00039467 95538 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 71.344 45.22 145350000 115110000 30242000 0 0 0 0 0 0 0 0 0 0 0 0 0 21353 2344 19497 179407;179408;179409;179410;179411 142914;142915;142916;142917;142918 142916 5 HEGLDAIENAVENLDATSDK Unmodified 2139.992 0.99202067 451 O75044;P0DMP2;P0DJJ0 SRGAP2;SRGAP2B;SRGAP2C SLIT-ROBO Rho GTPase-activating protein 2;SLIT-ROBO Rho GTPase-activating protein 2B;SLIT-ROBO Rho GTPase-activating protein 2C yes no 0 0 0 By MS/MS 2 0 1 1 90.446 82.316 3 2.4156E-10 106863 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 91.725 88.231 13831000 13831000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21354 451 19498 179412 142919;142920 142920 2 HEGLERDLAALEDK Unmodified 1594.7951 0.79509919 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS By MS/MS 2.17 0.687 1 3 2 4 2 75.478 70.984 3 1.1979E-29 95551 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 114.64 93.091 288000000 230010000 57988000 0 0 0 0 0 0 0 0 0 0 0 0 0 21355 2344 19499 179413;179414;179415;179416;179417;179418 142921;142922;142923;142924;142925;142926;142927 142925 7 HEGTGQSSGITDQEK Unmodified 1572.7016 0.70159273 4467 Q9H9A5 CNOT10 CCR4-NOT transcription complex subunit 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.15 2.35 1 2 23 3 2 2 2 2 2 2 2 1 2 2 2 2 10.155 9.8728 2;3 2.6701E-90 12215 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 208.15 175.63 269650000 0 57445000 0 11675000 9681500 15373000 16179000 14891000 10235000 16082000 30957000 29156000 19867000 16523000 21589000 21356 4467 19500 179419;179420;179421;179422;179423;179424;179425;179426;179427;179428;179429;179430;179431;179432;179433;179434;179435;179436;179437;179438;179439;179440;179441;179442;179443;179444 142928;142929;142930;142931;142932;142933;142934;142935;142936;142937;142938;142939;142940;142941;142942;142943;142944 142931 15 HEHQVMLMR Unmodified 1179.5641 0.56411716 2508 Q15233 NONO Non-POU domain-containing octamer-binding protein yes yes 0 0 0 By MS/MS 10 0 1 1 26.67 27.362 3 0.022044 28830 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 39.305 27.439 6857100 0 0 0 0 0 0 0 0 0 0 0 6857100 0 0 0 21357 2508 19501 179445 142945 142945 1 HEIEAAIVR Unmodified 1036.5665 0.56654322 2330 Q13618 CUL3 Cullin-3 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS 10 0 4 1 1 1 1 34.464 34.446 2 0.0041698 36746 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 87.696 53.693 25684000 0 0 0 4629400 0 7771200 4994100 0 0 0 0 0 0 8289000 0 21358 2330 19502 179446;179447;179448;179449 142946;142947 142946 2 HEIESLYTK Unmodified 1118.5608 0.56078914 4393 Q9H4A3 WNK1 Serine/threonine-protein kinase WNK1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 4 14 1 2 1 1 2 1 1 1 1 1 1 1 2 1 1 32.665 31.965 2 3.2566E-97 34589 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 215.38 173.93 685370000 17587000 127190000 115590000 21487000 26405000 31036000 31093000 37933000 33141000 37337000 32684000 51187000 52271000 27374000 43046000 21359 4393 19503 179450;179451;179452;179453;179454;179455;179456;179457;179458;179459;179460;179461;179462;179463;179464;179465;179466;179467 142948;142949;142950;142951;142952;142953;142954;142955;142956;142957;142958;142959;142960;142961;142962;142963;142964;142965 142962 17 HEILTDMK Unmodified 985.49027 0.49026674 1238 P28715 ERCC5 DNA repair protein complementing XP-G cells yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 32.949 31.099 2 0.0095736 32905 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 82.452 32.326 38851000 0 16607000 10902000 0 0 0 0 0 0 5041100 0 6301600 0 0 0 21360 1238 19504 179468;179469;179470;179471;179472;179473 142966;142967;142968;142969;142970;142971;142972 142966 7 HEISEMNR Oxidation (M) 1030.4502 0.45019284 74 CON__P13647;P13647 KRT5 Keratin, type II cytoskeletal 5 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 1 1 1 3 2 2 1 1 4 2 3 7.8119 7.9634 2 4.2748E-48 2704 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 192.31 184.9 + 2578500000 0 0 0 643220000 160370000 171590000 109120000 353040000 75199000 269670000 129820000 198930000 271010000 103250000 93226000 21361 74 19505 179474;179475;179476;179477;179478;179479;179480;179481;179482;179483;179484;179485;179486;179487;179488;179489;179490;179491;179492;179493;179494;179495;179496 142973;142974;142975;142976;142977;142978;142979;142980;142981;142982;142983;142984;142985;142986;142987;142988 142982 98 16 HEISEMNR Unmodified 1014.4553 0.45527821 74 CON__P13647;P13647 KRT5 Keratin, type II cytoskeletal 5 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 1 2 1 1 1 2 2 1 1 1 11.697 11.87 2 7.2592E-78 10878 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 211.1 190.54 + 3002800000 0 0 0 585620000 145900000 152250000 102730000 564580000 85580000 265160000 148220000 398580000 325500000 121840000 106820000 21362 74 19505 179497;179498;179499;179500;179501;179502;179503;179504;179505;179506;179507;179508;179509;179510;179511 142989;142990;142991;142992;142993;142994;142995;142996;142997;142998;142999;143000;143001;143002;143003;143004;143005;143006;143007;143008;143009 142990 20 HEIVQTLSLK Unmodified 1166.6659 0.66592292 2256 Q13228 SELENBP1 Selenium-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 51.246 51.755 2 1.0281E-31 57332 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 199.11 117.82 101260000 0 0 0 0 0 0 0 0 0 0 16079000 19664000 0 11414000 54102000 21363 2256 19506 179512;179513;179514;179515 143010;143011;143012;143013 143010 4 HEKSEMHLK Oxidation (M) 1153.555 0.55499226 2758 Q5SVZ6 ZMYM1 Zinc finger MYM-type protein 1 yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 13.952 10.788 3 0.041606 13654 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 48.283 18.029 62101000 29600000 0 32501000 0 0 0 0 0 0 0 0 0 0 0 0 21364 2758 19507 179516;179517 143014 143014 1 HELIEFR Unmodified 942.49232 0.49231565 2040 Q00610 CLTC Clathrin heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 49.092 49.229 2 0.026251 55696 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 79.116 32.049 76946000 0 0 0 6314400 0 14171000 0 8297400 7440600 0 0 30031000 10692000 0 0 21365 2040 19508 179518;179519;179520;179521;179522;179523 143015;143016 143015 2 HELLLGAGSGPGAGQQQATPGALLQAGPPR Unmodified 2848.4944 0.49438792 3798 Q96DI7 SNRNP40 U5 small nuclear ribonucleoprotein 40 kDa protein yes yes 0 0 0 By MS/MS 10 0 1 1 80.18 80.41 3 2.8126E-46 92659 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.739 68.859 10888000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10888000 21366 3798 19509 179524 143017;143018 143018 2 HELLNSTR Unmodified 968.50394 0.50394296 1977 P78347 GTF2I General transcription factor II-I yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 14.629 14.748 2 0.0051643 14287 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 107.9 64.895 86101000 0 0 0 11825000 7222200 7919600 6928300 0 0 0 0 14581000 11426000 11727000 14472000 21367 1977 19510 179525;179526;179527;179528;179529;179530;179531;179532;179533 143019;143020;143021;143022;143023;143024;143025;143026;143027;143028 143024 10 HELLQPFNVLYEK Unmodified 1628.8562 0.85624288 5067 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 2.67 1.99 12 2 1 8 4 2 1 89.22 83.685 2;3 9.264E-25 106457 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 196.38 174.04 740010000 373330000 338580000 10705000 0 0 0 0 0 0 0 0 0 0 0 17390000 21368 5067 19511 179534;179535;179536;179537;179538;179539;179540;179541;179542;179543;179544;179545;179546;179547;179548 143029;143030;143031;143032;143033;143034;143035;143036;143037;143038;143039;143040;143041;143042;143043;143044;143045 143042 11 HELLSLASSNHLGK Unmodified 1504.7998 0.79979063 279 O15372 EIF3H Eukaryotic translation initiation factor 3 subunit H yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 2 2 1 1 1 2 2 1 2 1 1 55.42 54.129 3 5.188E-19 76936 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 124.51 111.89 311180000 62277000 56329000 0 0 0 11706000 6210800 0 6823200 25512000 23772000 14705000 28666000 12020000 63155000 21369 279 19512 179549;179550;179551;179552;179553;179554;179555;179556;179557;179558;179559;179560;179561;179562;179563;179564 143046;143047;143048;143049;143050;143051;143052;143053;143054;143055;143056 143053 8 HELNINPK Unmodified 963.51378 0.51377937 3229 Q8IVL5 LEPREL1 Prolyl 3-hydroxylase 2 yes yes 0 0 0 By MS/MS 2 0 1 1 25.727 22.719 2 0.012994 28732 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 98.458 71.496 25127000 0 0 25127000 0 0 0 0 0 0 0 0 0 0 0 0 21370 3229 19513 179565 143057 143057 1 HELQANCYEEVK Unmodified 1518.6773 0.67729224 1165 P23528 CFL1 Cofilin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.13 3.76 11 3 24 4 7 3 2 2 2 2 2 2 2 2 2 2 2 2 33.244 31.924 2;3 3.5415E-54 34367 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 200.82 162.51 10493000000 454980000 7178100000 1252300000 42889000 27686000 48959000 39284000 42942000 48921000 60928000 315080000 266660000 60753000 164530000 489090000 21371 1165 19514 179566;179567;179568;179569;179570;179571;179572;179573;179574;179575;179576;179577;179578;179579;179580;179581;179582;179583;179584;179585;179586;179587;179588;179589;179590;179591;179592;179593;179594;179595;179596;179597;179598;179599;179600;179601;179602;179603 143058;143059;143060;143061;143062;143063;143064;143065;143066;143067;143068;143069;143070;143071;143072;143073;143074;143075;143076;143077;143078;143079;143080;143081;143082;143083;143084;143085;143086;143087;143088;143089;143090;143091;143092;143093;143094;143095;143096;143097 143083 37 HELQVEMK Oxidation (M) 1028.4961 0.4960804 417 O60610 DIAPH1 Protein diaphanous homolog 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.572 12.726 2 0.0044774 11110 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.492 54.989 63316000 0 0 0 4898500 4243100 5830900 5398100 3589700 3380200 6816400 4935500 7503300 6145900 4279800 6295100 21372 417 19515 179604;179605;179606;179607;179608;179609;179610;179611;179612;179613;179614;179615 143098;143099;143100;143101;143102;143103;143104;143105;143106 143100 520 9 HELQVEMK Unmodified 1012.5012 0.50116577 417 O60610 DIAPH1 Protein diaphanous homolog 1 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 27.189 27.451 2 0.0047513 28151 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 126.24 82.126 81759000 0 0 0 2329700 0 9644000 5718800 4057800 0 7918800 8863900 9921000 10131000 7424300 15749000 21373 417 19515 179616;179617;179618;179619;179620;179621;179622;179623;179624;179625 143107;143108;143109;143110;143111 143109 4 HELVFVDTK Unmodified 1086.571 0.5709599 674 O95625 ZBTB11 Zinc finger and BTB domain-containing protein 11 yes yes 0 0 0 By MS/MS 2 0 2 2 52.74 48.828 2 0.021309 61337 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 105.52 69.902 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21374 674 19516 179626;179627 143112;143113 143112 2 HEMLPEFYK Oxidation (M) 1208.5536 0.55359527 3170 Q86VP6 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 51.101 51.264 2 0.0020161 58255 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 91.853 77.857 107760000 0 0 0 4035100 0 21808000 6034300 0 0 0 14262000 0 23715000 11061000 26843000 21375 3170 19517 179628;179629;179630;179631;179632;179633;179634;179635 143114;143115;143116;143117;143118;143119;143120;143121 143116 4789 8 HEMLPEFYK Unmodified 1192.5587 0.55868065 3170 Q86VP6 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 60.854 61.216 2 0.0035911 68890 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 123.72 113.01 19672000 0 0 0 0 0 4834600 0 0 0 0 0 2518600 0 0 12319000 21376 3170 19517 179636;179637;179638 143122;143123 143123 1 HENEALWR Unmodified 1053.4992 0.49919194 2041 Q00613 HSF1 Heat shock factor protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 29.335 29.677 2 0.045385 30783 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.561 25.133 33107000 0 0 0 0 0 0 4569800 2622100 0 0 5329600 0 0 0 20586000 21377 2041 19518 179639;179640;179641;179642 143124 143124 1 HENYDEALR Unmodified 1145.5102 0.51015055 4521 Q9HCS7 XAB2 Pre-mRNA-splicing factor SYF1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 22.657 22.92 2 0.0072675 23971 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 72.879 42.694 45854000 0 0 0 2147400 0 3944000 2121500 2988900 0 6152200 3792500 6204300 6307700 4613600 7582100 21378 4521 19519 179643;179644;179645;179646;179647;179648;179649;179650;179651;179652 143125;143126;143127;143128;143129;143130;143131;143132 143130 8 HEPVQPSAHHSAEPAEAGK Unmodified 1977.9293 0.92930126 1662 P51608 MECP2 Methyl-CpG-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 4 2 2 15.653 12.395 3;4 0.00017802 18489 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.672 46.387 39258000 28302000 0 10955000 0 0 0 0 0 0 0 0 0 0 0 0 21379 1662 19520 179653;179654;179655;179656 143133;143134;143135;143136 143134 3 HEQADEDLLSQYENGSSTVVEAK Unmodified 2548.1565 0.15651982 3621 Q92547 TOPBP1 DNA topoisomerase 2-binding protein 1 yes yes 0 0 0 By MS/MS 3 0 1 1 75.359 71.803 3 0.026152 86365 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 21.349 12.185 3750000 0 3750000 0 0 0 0 0 0 0 0 0 0 0 0 0 21380 3621 19521 179657 143137 143137 1 HEQEYMEVR Unmodified 1219.5292 0.52917144 2519 Q15363 TMED2 Transmembrane emp24 domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 2 1 1 25.224 25.472 2 0.0036433 27813 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 123.35 111.51 112730000 0 0 0 0 8560800 7233600 10645000 9701500 7250300 8133500 7997800 9789700 14591000 9478800 19344000 21381 2519 19522 179658;179659;179660;179661;179662;179663;179664;179665;179666;179667;179668;179669;179670 143138;143139;143140;143141;143142;143143;143144;143145;143146;143147;143148;143149 143149 8 HEQEYMEVR Oxidation (M) 1235.5241 0.52408606 2519 Q15363 TMED2 Transmembrane emp24 domain-containing protein 2 yes yes 0 1 0 By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 1 2 2 2 2 2 2 2 2 2 2 2 12.934 13.102 2;3 0.0055155 12376 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 69.812 60.598 93588000 0 0 0 3335200 6873500 6039200 8656800 6913300 6367700 9717400 7701600 12284000 11078000 5027900 9593300 21382 2519 19522 179671;179672;179673;179674;179675;179676;179677;179678;179679;179680;179681;179682;179683;179684;179685;179686;179687;179688;179689;179690;179691;179692;179693 143150;143151;143152;143153;143154 143153 4140 4 HEQGLSTALSVEK Unmodified 1397.7151 0.71505795 3874 Q96I25 RBM17 Splicing factor 45 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 6.75 3.85 4 1 7 3 2 1 1 1 1 1 2 46.406 44.577 2;3 4.5656E-64 59135 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 229.75 196.37 248450000 0 134130000 36085000 0 0 10153000 10575000 0 8112800 10318000 0 0 10546000 0 28526000 21383 3874 19523 179694;179695;179696;179697;179698;179699;179700;179701;179702;179703;179704;179705 143155;143156;143157;143158;143159;143160;143161;143162;143163;143164 143158 8 HEQILVLDPPTDLK Unmodified 1616.8774 0.87737225 4794 Q9P0L0 VAPA Vesicle-associated membrane protein-associated protein A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 4 12 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 78.814 77.738 2;3 1.9988E-05 89776 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 68.044 56.774 175080000 7610700 22455000 16835000 3942700 4168900 11590000 6373300 11869000 7304500 12660000 14252000 16816000 6354500 10032000 22815000 21384 4794 19524 179706;179707;179708;179709;179710;179711;179712;179713;179714;179715;179716;179717;179718;179719;179720;179721 143165;143166;143167;143168;143169;143170;143171;143172;143173;143174;143175;143176;143177;143178;143179;143180;143181;143182 143167 18 HEQNIDCGGGYVK Unmodified 1475.6463 0.64632646 1225 P27797 CALR Calreticulin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 8 2 24 3 5 2 2 2 2 2 2 2 2 2 2 2 2 2 25.051 24.058 2;3 7.5728E-144 30607 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 275.95 251.11 6215900000 517950000 3624800000 233440000 101260000 75479000 68281000 94234000 96202000 80973000 94588000 270200000 195490000 138760000 170800000 453410000 21385 1225 19525 179722;179723;179724;179725;179726;179727;179728;179729;179730;179731;179732;179733;179734;179735;179736;179737;179738;179739;179740;179741;179742;179743;179744;179745;179746;179747;179748;179749;179750;179751;179752;179753;179754;179755 143183;143184;143185;143186;143187;143188;143189;143190;143191;143192;143193;143194;143195;143196;143197;143198;143199;143200;143201;143202;143203;143204;143205;143206;143207;143208;143209;143210;143211;143212;143213;143214 143206 26 HEQNRQDLVK Unmodified 1265.6476 0.64764709 2904 Q6NXE6 ARMC6 Armadillo repeat-containing protein 6 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 7.9596 7.4786 3 0.026924 4819 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.866 16.841 120640000 53111000 0 875460 3135600 3102500 7906200 4257800 0 0 8269600 0 9280300 6665700 6683700 17353000 21386 2904 19526 179756;179757;179758;179759;179760;179761;179762;179763;179764;179765;179766 143215;143216;143217 143216 1 HEQVENCLLTSPFEDIFK Unmodified 2205.0412 0.041219473 2385 Q14181 POLA2 DNA polymerase alpha subunit B yes yes 0 0 0 By MS/MS 3 0 1 1 95.865 92.61 3 0.0089721 110978 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 35.176 31.736 1752300 0 1752300 0 0 0 0 0 0 0 0 0 0 0 0 0 21387 2385 19527 179767 143218 143218 1 HEQVYIR Unmodified 943.48756 0.48756462 1016 P15309 ACPP Prostatic acid phosphatase;PAPf39 yes yes 0 0 0 By MS/MS 10 0 1 1 19.192 19.046 2 0.022521 19548 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 104.8 69.694 4548600 0 0 0 4548600 0 0 0 0 0 0 0 0 0 0 0 21388 1016 19528 179768 143219 143219 1 HESLFSLETNFLEEESGDNSSLK Unmodified 2611.1926 0.19257098 2853 Q68CQ4 DIEXF Digestive organ expansion factor homolog yes yes 0 0 0 By MS/MS 2 0 1 1 95.972 87.841 3 0.00010493 113589 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.603 48.903 12160000 12160000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21389 2853 19529 179769 143220 143220 0 HESLRPAAGQSRPPTAR Unmodified 1829.9609 0.96087616 4965 Q9UKG1 APPL1 DCC-interacting protein 13-alpha yes yes 0 0 2 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 19.183 19.388 4 0.038717 19751 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 19.819 9.6229 28588000 0 0 0 0 0 0 0 6064100 7388700 0 0 0 0 15135000 0 21390 4965 19530 179770;179771;179772 143221 143221 1 HESQMDSVVK Oxidation (M) 1174.5288 0.52883709 2044 Q00765 REEP5 Receptor expression-enhancing protein 5 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.55 3 3 12 1 4 1 1 1 1 1 1 1 1 1 1 1 1 1 7.3687 6.3834 2 0.00017066 4339 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 140.45 119 284760000 262620 186220000 8634600 6363300 5672800 5709100 5875300 5956900 6119800 9802600 10381000 9159200 9088100 7117300 8399000 21391 2044 19531 179773;179774;179775;179776;179777;179778;179779;179780;179781;179782;179783;179784;179785;179786;179787;179788;179789;179790 143222;143223;143224;143225;143226;143227;143228;143229;143230;143231;143232;143233;143234;143235;143236 143227 3306 13 HESQMDSVVK Unmodified 1158.5339 0.53392246 2044 Q00765 REEP5 Receptor expression-enhancing protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 19.038 18.207 2 0.0003426 18847 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 138.98 79.994 359320000 14657000 189820000 15575000 11002000 8453000 10298000 8180000 11090000 5260100 13486000 15960000 14563000 13299000 11471000 16203000 21392 2044 19531 179791;179792;179793;179794;179795;179796;179797;179798;179799;179800;179801;179802;179803;179804;179805;179806 143237;143238;143239;143240;143241;143242;143243;143244;143245;143246;143247;143248;143249;143250;143251;143252;143253;143254;143255;143256 143255 20 HESVEYKPPK Unmodified 1212.6139 0.61388734 5198 Q9Y4E8 USP15 Ubiquitin carboxyl-terminal hydrolase 15 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 21.06 17.23 3 0.0038881 21641 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 78.932 57.702 148000000 21251000 41783000 84961000 0 0 0 0 0 0 0 0 0 0 0 0 21393 5198 19532 179807;179808;179809;179810 143257;143258;143259;143260 143258 3 HETALEMQNPNLNNK Unmodified 1751.8261 0.82608174 2967 Q6SJ93 FAM111B Protein FAM111B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.25 3.34 2 1 1 2 1 1 45.473 42.099 3 0.00027366 55080 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 50.102 31.964 40185000 0 27899000 4913000 0 0 0 0 0 0 0 0 0 0 0 7372700 21394 2967 19533 179811;179812;179813;179814 143261;143262;143263;143264 143261 4 HETALEMQNPNLNNK Oxidation (M) 1767.821 0.82099636 2967 Q6SJ93 FAM111B Protein FAM111B yes yes 0 1 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 32.111 28.254 3 0.0043309 35943 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 45.115 32.83 7711900 0 3617700 4094100 0 0 0 0 0 0 0 0 0 0 0 0 21395 2967 19533 179815;179816 143265;143266 143266 4591 2 HETALVNPDSFGIR Unmodified 1554.7791 0.77905519 4979 Q9UKY1 ZHX1 Zinc fingers and homeoboxes protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 71.056 71.305 3 0.018799 81127 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.127 26.045 88424000 0 0 0 0 0 0 0 0 0 0 25616000 0 20141000 17731000 24935000 21396 4979 19534 179817;179818;179819;179820 143267 143267 1 HETALVNPDSFGIRAK Unmodified 1753.9111 0.911132 4979 Q9UKY1 ZHX1 Zinc fingers and homeoboxes protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 74.077 65.946 3 8.1194E-11 87248 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.564 67.52 16362000 16362000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21397 4979 19535 179821 143268 143268 1 HETEFAELEVK Unmodified 1330.6405 0.64049603 673 O95619 YEATS4 YEATS domain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS 2 0 4 2 2 61.7 55.66 2;3 0.0077927 68777 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 69.825 44.902 24908000 9995700 0 14912000 0 0 0 0 0 0 0 0 0 0 0 0 21398 673 19536 179822;179823;179824;179825 143269;143270;143271 143270 2 HETFITSSGK Unmodified 1105.5404 0.54038805 2863 Q69YN4 KIAA1429 Protein virilizer homolog yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 24.582 20.585 2 2.2402E-06 28812 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 149.72 117.37 34756000 15687000 0 19069000 0 0 0 0 0 0 0 0 0 0 0 0 21399 2863 19537 179826;179827 143272;143273;143274;143275 143273 4 HETWSGHVISS Unmodified 1238.568 0.56799978 5120 Q9Y2V2 CARHSP1 Calcium-regulated heat stable protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.65 3.65 5 12 3 2 1 1 1 1 1 1 1 1 1 1 1 1 37.782 36.617 2;3 3.4413E-09 46199 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 140.35 132.7 1134800000 635350000 0 367950000 2490100 1887100 4355200 2869000 3023900 3008100 6283300 16988000 23768000 6731800 14633000 45418000 21400 5120 19538 179828;179829;179830;179831;179832;179833;179834;179835;179836;179837;179838;179839;179840;179841;179842;179843;179844 143276;143277;143278;143279;143280;143281;143282;143283;143284;143285;143286;143287;143288 143284 13 HEVININLK Unmodified 1078.6135 0.61349341 1984 P78417 GSTO1 Glutathione S-transferase omega-1 yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 52.115 52.551 2 0.0050879 58197 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.998 41.711 26597000 0 0 0 0 0 0 0 0 0 0 4227000 0 0 2661500 19709000 21401 1984 19539 179845;179846;179847 143289 143289 1 HEVSASTQSTPASSR Unmodified 1543.7227 0.72266253 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching 6.67 3.94 5 7 1 2 2 1 1 1 1 1 1 1 11.789 10.472 2;3 1.1567E-11 13440 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.43 112.69 47040000 2547800 24454000 9442400 0 357540 3769100 0 0 510360 2158600 0 2831800 0 968500 0 21402 2047 19540 179848;179849;179850;179851;179852;179853;179854;179855;179856;179857;179858;179859 143290;143291;143292;143293;143294;143295 143292 5 HEVSASTQSTPASSRAQTLPTSVVTITSESSPGK Unmodified 3427.7067 0.7066847 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 74.001 68.394 4 7.0562E-91 89202 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 122.63 117.09 58884000 52147000 0 6737000 0 0 0 0 0 0 0 0 0 0 0 0 21403 2047 19541 179860;179861 143296;143297 143296 2 HEVSGETVVFQGGALGK Unmodified 1713.8686 0.86859848 2828 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 2 2 1 1 1 1 1 1 1 1 1 1 1 1 61.422 59.944 2;3 3.8449E-07 74228 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 95.57 86.773 347100000 14129000 139520000 97790000 5043000 3122700 8127100 5246400 4546400 5273700 7046700 11648000 12813000 6236400 9149000 17410000 21404 2828 19542 179862;179863;179864;179865;179866;179867;179868;179869;179870;179871;179872;179873;179874;179875;179876;179877;179878 143298;143299;143300;143301;143302;143303;143304;143305;143306;143307;143308;143309 143301 12 HEVTILGGLNEFVVK Unmodified 1653.909 0.90900673 1881 P62256 UBE2H Ubiquitin-conjugating enzyme E2 H yes yes 0 0 0 By MS/MS 2 0 1 1 93.933 85.803 3 0.0023153 111046 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 35.711 31.009 13793000 13793000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21405 1881 19543 179879 143310 143310 1 HEWEAHNK Unmodified 1049.4679 0.46789181 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 7.0686 4.2023 2 0.017493 7451 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.308 43.938 12535000 9578900 0 2956500 0 0 0 0 0 0 0 0 0 0 0 0 21406 2047 19544 179880;179881 143311;143312 143311 2 HEWQVNGLDDIK Unmodified 1452.6997 0.69974224 5088 Q9Y281 CFL2 Cofilin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.33 2.98 5 1 2 1 2 1 69.759 64.927 2;3 4.691E-46 80141 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 218.75 152.48 170540000 37914000 85538000 40690000 0 0 0 0 0 0 0 0 0 0 0 6400100 21407 5088 19545 179882;179883;179884;179885;179886;179887 143313;143314;143315;143316;143317;143318 143318 5 HFADGLETDGTLQK Unmodified 1530.7314 0.7314363 4388 Q9H410 DSN1 Kinetochore-associated protein DSN1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 2 1 1 1 49.007 48.546 2;3 1.4504E-06 63854 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.3 98.361 126020000 0 16613000 9876300 0 4801100 8884600 6631700 6647900 6288400 7553700 6972300 16056000 8258600 7895000 19538000 21408 4388 19546 179888;179889;179890;179891;179892;179893;179894;179895;179896;179897;179898;179899;179900;179901 143319;143320;143321;143322;143323;143324;143325;143326;143327 143320 8 HFAEAVNWCDEGLQIDAK Unmodified 2101.9527 0.95273882 692 O95801 TTC4 Tetratricopeptide repeat protein 4 yes yes 0 0 0 By MS/MS 2 0 1 1 82.948 74.818 3 0.028473 97992 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 25.917 15.578 7981500 7981500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21409 692 19547 179902 143328 143328 1 HFCPNVPIILVGNK Unmodified 1606.8654 0.86536778 1851;858 P08134;P61586 RHOC;RHOA Rho-related GTP-binding protein RhoC;Transforming protein RhoA no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 80.644 80.788 3 0.0026142 92980 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.481 43.163 42386000 0 0 0 0 0 6475500 0 0 5503700 0 4874000 4730000 0 2523000 18280000 21410 858;1851 19548 179903;179904;179905;179906;179907;179908;179909 143329;143330;143331;143332;143333 143330 5 HFDETVNR Unmodified 1016.4676 0.46755746 788 P04843 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 0 0 0 By matching By MS/MS By matching 10 0 3 1 1 1 14.998 15.228 2 0.011381 13749 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 77.058 59.672 42510000 0 0 0 0 0 935100 0 0 0 0 0 0 0 22405000 19169000 21411 788 19549 179910;179911;179912 143334 143334 1 HFDFVAK Unmodified 862.43374 0.43373813 2406 Q14432 PDE3A cGMP-inhibited 3',5'-cyclic phosphodiesterase A yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 40.524 39.739 2 0.019157 42285 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.63 67.51 368640000 81939000 0 48989000 12716000 14755000 23275000 20840000 13232000 15312000 23581000 25772000 0 23099000 23805000 41329000 21412 2406 19550 179913;179914;179915;179916;179917;179918;179919;179920;179921;179922;179923;179924;179925 143335;143336;143337;143338;143339;143340;143341;143342;143343 143337 8 HFEANNGK Unmodified 915.41988 0.41987898 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 1.4425 -1.4864 2 1.084E-37 935 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 215.1 215.1 77747000 0 75768000 1978300 0 0 0 0 0 0 0 0 0 0 0 0 21413 4819 19551 179926;179927;179928 143344;143345;143346;143347;143348;143349;143350 143350 7 HFEANNGKLPDNK Unmodified 1482.7215 0.72154031 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 6 4 2 2 1 1 1 1 22.76 20.983 3 0.00075042 31072 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.43 78.218 100760000 65246000 0 7012000 0 0 0 0 0 0 0 0 22044000 0 0 6460600 21414 4819 19552 179929;179930;179931;179932 143351;143352;143353;143354 143351 4 HFEASCGQLSPAR Unmodified 1458.6674 0.66739625 3931 Q96N21 ENTHD2 AP-4 complex accessory subunit tepsin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 33.579 33.817 3 0.00044631 37065 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 49.774 45.229 74012000 0 0 0 0 4510100 5077100 3478400 3773400 4658300 4647900 7430200 23212000 6176900 5990100 5057700 21415 3931 19553 179933;179934;179935;179936;179937;179938;179939;179940;179941;179942;179943 143355;143356;143357;143358;143359;143360;143361;143362 143359 8 HFEATDILVSK Unmodified 1258.6558 0.65575216 437 O60841 EIF5B Eukaryotic translation initiation factor 5B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 62.734 62.97 2 0.00018476 70827 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 123.63 105.02 102480000 0 0 0 0 0 0 21826000 13368000 11555000 0 0 0 15806000 15698000 24222000 21416 437 19554 179944;179945;179946;179947;179948;179949;179950;179951 143363;143364;143365;143366;143367;143368;143369;143370;143371 143366 9 HFEEHNSMNELK Unmodified 1513.662 0.66197652 4233 Q9BXS6 NUSAP1 Nucleolar and spindle-associated protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 26.258 26.646 3 0.0046462 28841 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 47.915 35.495 15897000 0 0 0 0 0 4193500 0 0 0 0 3930000 7773000 0 0 0 21417 4233 19555 179952;179953;179954 143372;143373 143372 2 HFEEHNSMNELK Oxidation (M) 1529.6569 0.65689115 4233 Q9BXS6 NUSAP1 Nucleolar and spindle-associated protein 1 yes yes 0 1 0 By MS/MS By MS/MS 6 4 1 1 1 1 16.63 14.231 3 0.012829 13709 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 45.307 36.257 16814000 0 0 16814000 0 0 0 0 0 0 0 0 0 0 0 0 21418 4233 19555 179955;179956 143374;143375 143374 5708 2 HFELGGDK Unmodified 901.42938 0.42938104 2008 P83881 RPL36A 60S ribosomal protein L36a no no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24.582 23.835 2 0.0082421 23427 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 123.72 66.257 533270000 74896000 43375000 4076600 26123000 0 24508000 23195000 15158000 27710000 29882000 42547000 61782000 63065000 39896000 57058000 21419 2008 19556 179957;179958;179959;179960;179961;179962;179963;179964;179965;179966;179967;179968;179969;179970 143376;143377;143378;143379;143380;143381;143382;143383 143381 0 HFGGEMAVK Oxidation (M) 990.4593 0.45930096 238 O14981 BTAF1 TATA-binding protein-associated factor 172 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 16.276 13 2 0.0063265 16236 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 93.374 70.445 63754000 41563000 0 22191000 0 0 0 0 0 0 0 0 0 0 0 0 21420 238 19557 179971;179972 143384;143385 143385 325 2 HFGGEMAVK Unmodified 974.46439 0.46438634 238 O14981 BTAF1 TATA-binding protein-associated factor 172 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 29.161 26.008 2 0.031045 32904 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 66.073 50.852 5737200 0 0 5737200 0 0 0 0 0 0 0 0 0 0 0 0 21421 238 19557 179973;179974 143386;143387 143387 2 HFGINQTSYEGPK Unmodified 1476.6997 0.69974224 2594 Q15911 ZFHX3 Zinc finger homeobox protein 3 yes yes 0 0 0 By MS/MS 2 0 1 1 53.925 45.862 3 0.0011661 63048 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.176 63.565 10884000 10884000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21422 2594 19558 179975 143388 143388 1 HFGQAPSK Unmodified 870.4348 0.43480077 2810 Q5VT52 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 8.191 7.802 2 0.005566 5058 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 106.36 79.394 278460000 71557000 0 10113000 0 10815000 8109500 16898000 13335000 24313000 18584000 44098000 0 16805000 20299000 23533000 21423 2810 19559 179976;179977;179978;179979;179980;179981;179982;179983;179984;179985;179986;179987;179988 143389;143390;143391;143392;143393;143394;143395;143396;143397;143398;143399 143392 10 HFGSVVAQTIR Unmodified 1213.6568 0.65675521 5037 Q9UNN5 FAF1 FAS-associated factor 1 yes yes 0 0 0 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 47.464 47.889 3 0.012063 52565 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.306 31.801 18115000 0 0 0 0 0 4048800 0 0 0 3160800 0 3629000 0 0 7276600 21424 5037 19560 179989;179990;179991;179992 143400 143400 1 HFIDEELEK Unmodified 1158.5557 0.55570376 2486 Q15047 SETDB1 Histone-lysine N-methyltransferase SETDB1 yes yes 0 0 0 By MS/MS 10 0 1 1 43.32 44.063 2 0.0050992 48316 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.647 53.329 28962000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28962000 21425 2486 19561 179993 143401 143401 1 HFIDENK Unmodified 901.42938 0.42938104 3247 Q8IWV8 UBR2 E3 ubiquitin-protein ligase UBR2 yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 16.534 13.173 2 0.03416 16422 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 85.265 46.473 12556000 3237900 0 9318600 0 0 0 0 0 0 0 0 0 0 0 0 21426 3247 19562 179994;179995 143402 143402 1 HFILDECDK Unmodified 1175.5281 0.5281088 2347 Q13838 DDX39B Spliceosome RNA helicase DDX39B yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 51.485 45.502 2 0.00013532 56906 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 167.33 115.48 65122000 23217000 0 41905000 0 0 0 0 0 0 0 0 0 0 0 0 21427 2347 19563 179996;179997 143403;143404;143405 143404 3 HFIQSLSK Unmodified 958.52362 0.52361577 2947 Q6PGP7 TTC37 Tetratricopeptide repeat protein 37 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 31.45 31.586 2 0.023017 34346 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 60.682 28.746 33672000 0 0 0 2168200 2579200 4856700 2963700 0 0 3291400 5647700 6171800 2598100 3394700 0 21428 2947 19564 179998;179999;180000;180001;180002;180003;180004;180005;180006 143406;143407 143406 2 HFLPASR Unmodified 826.44497 0.44497152 2449 Q14807 KIF22 Kinesin-like protein KIF22 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 23.202 23.407 2 0.040879 23512 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.398 36.463 69644000 0 0 0 5094500 8407500 0 12428000 11916000 0 5993600 4651600 10533000 0 0 10620000 21429 2449 19565 180007;180008;180009;180010;180011;180012;180013;180014 143408 143408 1 HFLPEMLSK Oxidation (M) 1116.5638 0.56376603 1974 P78344 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 48.858 48.226 2 0.0023077 54223 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 103.56 84.781 618870000 37552000 0 0 34799000 32220000 52702000 54682000 41342000 47500000 71020000 0 111970000 60160000 0 74916000 21430 1974 19566 180015;180016;180017;180018;180019;180020;180021;180022;180023;180024;180025 143409;143410;143411;143412;143413;143414;143415;143416;143417;143418;143419;143420;143421 143413 3170 12 HFLPEMLSK Unmodified 1100.5689 0.56885141 1974 P78344 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.64 1.67 1 21 1 2 2 2 2 1 2 2 1 1 2 2 2 66.553 66.194 2 0.00355 74940 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 89.698 74.066 323590000 13758000 0 0 10320000 8247500 30431000 11697000 21289000 25383000 11696000 17594000 32184000 23245000 35094000 82654000 21431 1974 19566 180026;180027;180028;180029;180030;180031;180032;180033;180034;180035;180036;180037;180038;180039;180040;180041;180042;180043;180044;180045;180046;180047 143422;143423;143424;143425;143426;143427;143428;143429;143430;143431;143432;143433;143434;143435;143436;143437;143438;143439;143440;143441;143442;143443;143444 143434 23 HFLVEDK Unmodified 886.45487 0.45486751 1729 P53992 SEC24C Protein transport protein Sec24C yes yes 0 0 0 By MS/MS By matching By MS/MS 2 0 3 1 1 1 33.909 29.129 2 0.01448 35798 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 120.65 42.897 128870000 70693000 23246000 34935000 0 0 0 0 0 0 0 0 0 0 0 0 21432 1729 19567 180048;180049;180050 143445;143446 143446 2 HFNDVVEFGENQEFTDDIEYLLSGLK Unmodified 3057.4244 0.42436183 3107 Q7Z5K2 WAPAL Wings apart-like protein homolog yes yes 0 0 0 By MS/MS 2 0 1 1 102.48 94.345 3 4.539E-38 121349 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 109.42 106.42 28450000 28450000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21433 3107 19568 180051 143447 143447 1 HFNLLSSK Unmodified 944.50797 0.50796571 4167 Q9BUP3 HTATIP2 Oxidoreductase HTATIP2 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 43.175 43.12 2 0.014208 47956 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 70.856 43.369 62602000 0 0 0 9545500 6119100 0 9270700 9933600 10175000 0 0 0 17559000 0 0 21434 4167 19569 180052;180053;180054;180055;180056;180057 143448 143448 1 HFPATIDSFQDAVK Unmodified 1574.7729 0.77290718 5277 Q9Y6D6 ARFGEF1 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS 2 0 3 1 1 1 79.174 73.997 3 0.00035009 94855 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.069 68.968 39906000 18599000 13214000 8092800 0 0 0 0 0 0 0 0 0 0 0 0 21435 5277 19570 180058;180059;180060 143449;143450 143449 2 HFPELADSAINAQLDLCEDEDVSIRR Unmodified 3012.4247 0.42471295 4278 Q9BZZ5 API5 Apoptosis inhibitor 5 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 88.946 83.096 4 0.0014676 106443 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 35.32 29.89 14306000 14306000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21436 4278 19571 180061;180062 143451;143452 143452 2 HFPELADSAINAQLDLCEDEDVSIRRQAIK Unmodified 3452.6994 0.69943125 4278 Q9BZZ5 API5 Apoptosis inhibitor 5 yes yes 0 0 2 By MS/MS 2.5 0.5 1 1 2 88.352 82.492 4 4.2484E-05 105822 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 39.459 34.403 13211000 13211000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21437 4278 19572 180063;180064 143453;143454 143454 2 HFPNIDREK Unmodified 1154.5833 0.58325592 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 26.305 26.549 3 0.0041633 26909 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 74.376 64.489 243340000 0 0 0 0 7384500 32561000 17869000 0 17559000 2215700 24256000 43427000 31434000 24464000 42173000 21438 2392 19573 180065;180066;180067;180068;180069;180070;180071;180072;180073;180074;180075 143455;143456;143457;143458;143459;143460;143461;143462;143463 143462 5 HFQQQEQERQER Unmodified 1641.7608 0.76077937 2667 Q3KQU3 MAP7D1 MAP7 domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.5606 6.6848 3 0.00048865 4085 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.435 50.801 101570000 0 0 0 3400400 5813300 6097300 6882000 7224400 8993900 10087000 10066000 11394000 10001000 9659600 11947000 21439 2667 19574 180076;180077;180078;180079;180080;180081;180082;180083;180084;180085;180086;180087 143464;143465;143466;143467;143468;143469;143470;143471;143472;143473;143474;143475 143467 11 HFQREEQER Unmodified 1257.585 0.58504683 2398 Q14244 MAP7 Ensconsin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 6.0477 6.1819 3 0.016062 3314 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.462 38.237 31445000 0 0 0 2368100 2456800 0 0 1913400 0 3379800 4958400 5771800 3475100 2897000 4224300 21440 2398 19575 180088;180089;180090;180091;180092;180093;180094;180095;180096 143476 143476 1 HFRDVESQK Unmodified 1144.5625 0.56252048 2673 Q3MHD2 LSM12 Protein LSM12 homolog yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 8.1351 8.3869 3 0.042472 6913 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 33.961 18.628 59126000 0 0 0 0 0 0 0 0 3459600 0 673600 16636000 10830000 6685200 20842000 21441 2673 19576 180097;180098;180099;180100;180101;180102 143477;143478 143477 2 HFSAADASR Unmodified 960.44134 0.44134271 948 P11441 UBL4A Ubiquitin-like protein 4A yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 10.893 11.019 2 0.004955 9748 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 85.161 56.649 160080000 0 0 0 8960100 9618400 11452000 17620000 14653000 9214000 0 16452000 22580000 20460000 0 29072000 21442 948 19577 180103;180104;180105;180106;180107;180108;180109;180110;180111;180112 143479;143480;143481;143482;143483;143484;143485;143486 143482 7 HFSEHPSTSK Unmodified 1155.5309 0.530886 360 O43719 HTATSF1 HIV Tat-specific factor 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 2 2 1 2 6.486 6.608 2;3 0.00048738 4592 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 104.22 94.217 322220000 0 0 0 18084000 22559000 22990000 28258000 25321000 4572900 37118000 56622000 46129000 5094800 4611200 50864000 21443 360 19578 180113;180114;180115;180116;180117;180118;180119;180120;180121;180122;180123;180124;180125;180126;180127;180128;180129;180130;180131;180132;180133;180134;180135 143487;143488;143489;143490;143491;143492;143493;143494;143495;143496;143497;143498 143497 10 HFSGESYLCSGALK Unmodified 1554.7137 0.71367774 3005 Q6ZRQ5 MMS22L Protein MMS22-like yes yes 0 0 0 By MS/MS 2 0 1 1 67.803 59.508 3 0.019416 79739 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 34.515 29.031 6099300 6099300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21444 3005 19579 180136 143499 143499 1 HFSGLEEAVYR Unmodified 1306.6306 0.63060004 1641 P50990 CCT8 T-complex protein 1 subunit theta yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.36 2.17 2 23 1 1 1 2 1 2 1 3 3 2 3 2 3 55.551 55.228 2;3 0.00021328 62228 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 70.808 62.921 328820000 14095000 10586000 0 4787800 0 23941000 8059100 19531000 6522200 23755000 25496000 25994000 30628000 23502000 111920000 21445 1641 19580 180137;180138;180139;180140;180141;180142;180143;180144;180145;180146;180147;180148;180149;180150;180151;180152;180153;180154;180155;180156;180157;180158;180159;180160;180161 143500;143501;143502;143503;143504;143505;143506;143507;143508;143509;143510;143511;143512;143513;143514;143515;143516;143517;143518;143519 143515 17 HFSPEELK Unmodified 985.4869 0.48689592 756 P02511 CRYAB Alpha-crystallin B chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.8 3.92 2 3 1 1 1 1 1 37.22 34.633 2 0.0074646 36009 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 89.55 65.578 56660000 7043700 28007000 0 0 0 0 0 0 0 0 0 11177000 0 0 10433000 21446 756 19581 180162;180163;180164;180165;180166 143520;143521;143522;143523;143524 143524 5 HFSQAEGSQLDEVR Unmodified 1601.7434 0.74339797 3055 Q7L5Y9 MAEA Macrophage erythroblast attacher yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 37.638 37.866 3 0.010448 40859 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 36.928 33.024 40543000 0 0 0 0 2257500 0 3880700 0 0 6357100 6706100 0 8329200 5117800 7894800 21447 3055 19582 180167;180168;180169;180170;180171;180172;180173 143525 143525 1 HFTEDGNILQLANLPDLYK Unmodified 2200.1164 0.11643333 1418 P40692 MLH1 DNA mismatch repair protein Mlh1 yes yes 0 0 0 By MS/MS 3 0 1 1 95.644 92.389 3 0.00045001 110674 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 38.824 29.57 1525400 0 1525400 0 0 0 0 0 0 0 0 0 0 0 0 0 21448 1418 19583 180174 143526 143526 1 HFTEDIQTR Unmodified 1145.5465 0.54653606 3987;1979 P78362;Q9UPE1;Q96SB4 SRPK2;SRPK3;SRPK1 SRSF protein kinase 2;SRSF protein kinase 2 N-terminal;SRSF protein kinase 2 C-terminal;SRSF protein kinase 3;SRSF protein kinase 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 26.122 26.301 2 0.0061887 28058 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 75.738 36.196 32860000 0 0 0 7595200 3636200 0 0 3635100 0 0 5669100 6537800 0 5786700 0 21449 1979;3987 19584 180175;180176;180177;180178;180179;180180 143527;143528;143529;143530;143531;143532 143527 6 HFTEFVPLR Unmodified 1144.6029 0.60292873 1398 P38606 ATP6V1A V-type proton ATPase catalytic subunit A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 67.002 67.22 2 0.0037018 76579 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 101.64 82.861 82067000 0 0 0 0 0 12531000 3864700 4804100 5285400 6844200 6680000 9975900 5495000 8041500 18545000 21450 1398 19585 180181;180182;180183;180184;180185;180186;180187;180188;180189;180190 143533;143534;143535;143536;143537;143538;143539 143539 7 HFTILDAPGHK Unmodified 1234.6459 0.64585618 1014 P15170;Q8IYD1 GSPT1;GSPT2 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A;Eukaryotic peptide chain release factor GTP-binding subunit ERF3B yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.3 3.2 4 2 21 4 2 1 1 2 3 1 1 1 1 2 2 2 4 47.827 46.797 2;3 7.1422E-05 65379 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.38 97.29 1273100000 115690000 85800000 0 41953000 16894000 110210000 54157000 72915000 69525000 32950000 67721000 121410000 111650000 98821000 273450000 21451 1014 19586 180191;180192;180193;180194;180195;180196;180197;180198;180199;180200;180201;180202;180203;180204;180205;180206;180207;180208;180209;180210;180211;180212;180213;180214;180215;180216;180217 143540;143541;143542;143543;143544;143545;143546;143547;143548;143549;143550;143551;143552;143553;143554;143555;143556;143557;143558;143559;143560;143561;143562;143563;143564;143565;143566;143567;143568;143569 143547 26 HFTNSVPNPR Unmodified 1167.5785 0.57850489 3554 Q8WUX9 CHMP7 Charged multivesicular body protein 7 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.343 26.543 2 0.0015698 28416 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 93.374 78.598 46969000 0 0 0 2105600 3008200 3149100 4110900 3925300 2842500 4191500 5182900 6883600 5512600 2225800 3831000 21452 3554 19587 180218;180219;180220;180221;180222;180223;180224;180225;180226;180227;180228;180229 143570;143571;143572;143573;143574;143575;143576;143577;143578 143572 9 HFTVMNYDPDVVLK Oxidation (M) 1692.8181 0.81814282 2384 Q14166 TTLL12 Tubulin--tyrosine ligase-like protein 12 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 78.568 72.628 2;3 1.3596E-47 92372 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 180.18 160.94 171690000 147790000 18319000 5576900 0 0 0 0 0 0 0 0 0 0 0 0 21453 2384 19588 180230;180231;180232;180233 143579;143580;143581;143582;143583 143579 3879 4 HFTVMNYDPDVVLK Unmodified 1676.8232 0.82322819 2384 Q14166 TTLL12 Tubulin--tyrosine ligase-like protein 12 yes yes 0 0 0 By MS/MS By matching By MS/MS 2 0 4 2 1 1 84.129 78.272 2;3 4.2097E-52 101191 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 219.42 198.64 165840000 150540000 12302000 2996200 0 0 0 0 0 0 0 0 0 0 0 0 21454 2384 19588 180234;180235;180236;180237 143584;143585;143586 143584 3 HFVALSTNTTK Unmodified 1217.6404 0.64043645 829 P06744 GPI Glucose-6-phosphate isomerase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.61 3.89 19 4 18 14 4 5 1 1 2 1 1 2 1 2 2 1 2 2 37.577 35.172 2;3 0 51576 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 300.81 257.04 9999100000 8207300000 766350000 426480000 9020800 5416100 10246000 7433200 8408900 8657800 8399100 143880000 58313000 9339000 80353000 249420000 21455 829 19589 180238;180239;180240;180241;180242;180243;180244;180245;180246;180247;180248;180249;180250;180251;180252;180253;180254;180255;180256;180257;180258;180259;180260;180261;180262;180263;180264;180265;180266;180267;180268;180269;180270;180271;180272;180273;180274;180275;180276;180277;180278 143587;143588;143589;143590;143591;143592;143593;143594;143595;143596;143597;143598;143599;143600;143601;143602;143603;143604;143605;143606;143607;143608;143609;143610;143611;143612;143613;143614;143615;143616;143617;143618;143619;143620;143621;143622;143623;143624;143625;143626;143627;143628;143629;143630;143631;143632 143608 40 HFVGMLPEK Oxidation (M) 1072.5376 0.53755128 1822 P60981 DSTN Destrin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 4.92 3.71 13 4 9 11 4 2 1 1 1 1 1 1 1 1 1 41.505 38 2 0.00039281 49275 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.98 102.85 2613100000 1805000000 310460000 352010000 11175000 0 0 10784000 10729000 8073100 13233000 17306000 0 12093000 11612000 50608000 21456 1822 19590 180279;180280;180281;180282;180283;180284;180285;180286;180287;180288;180289;180290;180291;180292;180293;180294;180295;180296;180297;180298;180299;180300;180301;180302;180303;180304 143633;143634;143635;143636;143637;143638;143639;143640;143641;143642;143643;143644;143645;143646;143647;143648;143649;143650;143651;143652;143653;143654;143655;143656;143657;143658;143659;143660;143661;143662;143663;143664;143665;143666 143634 2957 33 HFVGMLPEK Unmodified 1056.5426 0.54263666 1822 P60981 DSTN Destrin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.56 3.62 4 1 11 2 2 1 1 1 1 1 1 1 1 1 1 1 1 53.051 49.783 2 9.6776E-05 62283 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 152.63 122.45 1751000000 1333200000 186330000 79509000 0 0 18142000 0 0 0 14329000 0 28036000 0 0 91459000 21457 1822 19590 180305;180306;180307;180308;180309;180310;180311;180312;180313;180314;180315;180316;180317;180318;180319;180320 143667;143668;143669;143670;143671;143672;143673;143674;143675;143676;143677;143678;143679;143680;143681;143682;143683;143684;143685;143686;143687;143688;143689;143690 143684 24 HFVGYPTNSDFELK Unmodified 1652.7835 0.78347187 2454 Q14914 PTGR1 Prostaglandin reductase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 5.82 3.83 4 2 5 3 2 1 1 2 2 73.194 70.447 2;3 6.5437E-24 91614 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.942 86.147 974730000 640310000 173000000 110460000 0 0 0 0 0 0 1170600 0 0 0 5917700 43881000 21458 2454 19591 180321;180322;180323;180324;180325;180326;180327;180328;180329;180330;180331 143691;143692;143693;143694;143695;143696;143697;143698;143699;143700;143701;143702 143696 10 HFVLDECDK Unmodified 1161.5125 0.51245874 118 O00148 DDX39A ATP-dependent RNA helicase DDX39A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.42 3.66 3 1 8 1 2 1 1 1 1 1 1 1 1 1 39.199 37.388 2 3.8161E-07 47050 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 179.68 146.84 233580000 22626000 85625000 55661000 4520700 2128400 9386400 0 0 5922400 16738000 0 16925000 14045000 0 0 21459 118 19592 180332;180333;180334;180335;180336;180337;180338;180339;180340;180341;180342;180343 143703;143704;143705;143706;143707;143708;143709;143710;143711;143712 143709 10 HGAEHYWDLALSESVLESTD Unmodified 2258.0128 0.012756116 323 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 yes yes 0 0 0 By MS/MS 2 0 1 1 92.875 84.745 3 0.041044 109823 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 20.772 12.818 13889000 13889000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21460 323 19593 180344 143713 143713 1 HGAGAEISTVHPEQYAK Unmodified 1793.8697 0.86966111 3483 Q8TBX8 PIP4K2C Phosphatidylinositol 5-phosphate 4-kinase type-2 gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 4 1 1 2 44.36 38.787 3;4 2.9217E-22 54053 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 116.78 105.01 88042000 66413000 0 21630000 0 0 0 0 0 0 0 0 0 0 0 0 21461 3483 19594 180345;180346;180347;180348 143714;143715;143716;143717 143715 2 HGAGAEISTVNPEQYSK Unmodified 1786.8486 0.84859132 1537;1978 P48426;P78356 PIP4K2A;PIP4K2B Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha;Phosphatidylinositol 5-phosphate 4-kinase type-2 beta no no 0 0 0 By MS/MS By matching 2.25 0.433 3 1 3 1 51.027 45.937 2;3 4.1233E-16 59841 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 143.25 127.36 139190000 0 135830000 3358700 0 0 0 0 0 0 0 0 0 0 0 0 21462 1537;1978 19595 180349;180350;180351;180352 143718;143719;143720;143721 143720 3 HGAITNTK Unmodified 840.44537 0.44536545 1430 P41182 BCL6 B-cell lymphoma 6 protein yes yes 0 0 0 By MS/MS 2 0 1 1 0.33141 -2.9561 2 0.04418 196 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.915 44.943 3407000 3407000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21463 1430 19596 180353 143722 143722 1 HGANPDLRDEDGK Unmodified 1422.6488 0.6487693 5004 Q9ULT8 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 10.675 10.626 3 9.1393E-07 9706 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 79.089 59.957 133780000 0 0 6306600 7686100 5197700 10227000 7779900 6174200 5350800 11337000 12981000 19307000 11547000 10064000 19818000 21464 5004 19597 180354;180355;180356;180357;180358;180359;180360;180361;180362;180363;180364;180365;180366 143723;143724;143725;143726;143727;143728;143729;143730;143731;143732;143733 143723 9 HGAPGEEGQPSHAALAERGPK Unmodified 2095.0195 0.019513249 4415 Q9H6E5 TUT1 Speckle targeted PIP5K1A-regulated poly(A) polymerase yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 27.928 23.246 3;4 1.5234E-08 32809 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.168 59.688 83891000 81238000 0 2652800 0 0 0 0 0 0 0 0 0 0 0 0 21465 4415 19598 180367;180368;180369 143734;143735 143734 2 HGAPSPSHPISAPQAAAAAALR Unmodified 2077.0817 0.081719575 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 0 By MS/MS 10 0 1 1 54.988 55.614 3 0.027374 62849 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 21.308 17.039 7221000 0 0 0 0 0 0 0 0 0 0 0 7221000 0 0 0 21466 1364 19599 180370 143736 143736 1 HGAPSPSHPISAPQAAAAAALRR Unmodified 2233.1828 0.1828306 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 2 1 2 1 1 1 1 52.573 52.82 4 8.4911E-06 58210 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.992 31.519 169500000 0 0 0 0 0 34017000 4508100 18190000 9527500 30810000 0 29765000 0 0 42686000 21467 1364 19600 180371;180372;180373;180374;180375;180376;180377;180378;180379 143737;143738;143739;143740;143741;143742;143743;143744 143740 7 HGDEIITSTTSNYETQTFSSK Unmodified 2345.0659 0.065913898 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 61.084 59.744 3 5.7091E-104 76024 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 176.39 167.02 412050000 10656000 232300000 20213000 4211800 6398800 11296000 6986700 9056600 8786300 14692000 11908000 22647000 10706000 12706000 29483000 21468 2930 19601 180380;180381;180382;180383;180384;180385;180386;180387;180388;180389;180390;180391;180392;180393;180394;180395 143745;143746;143747;143748;143749;143750;143751;143752;143753;143754 143746 10 HGDEIYIAPSGVQK Unmodified 1512.7573 0.75725712 3860 Q96GX9 APIP Methylthioribulose-1-phosphate dehydratase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.56 3.86 3 1 5 1 2 1 1 1 1 2 49.525 47.319 2;3 2.5913E-19 51896 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 135.99 91.783 216970000 11925000 143880000 16217000 0 0 0 0 0 0 0 8660300 10889000 0 3829000 21565000 21469 3860 19602 180396;180397;180398;180399;180400;180401;180402;180403;180404 143755;143756;143757;143758;143759;143760;143761;143762;143763;143764;143765;143766;143767 143756 12 HGDGTTLDIMLK Oxidation (M) 1315.6442 0.6442012 1771 P55786 NPEPPS Puromycin-sensitive aminopeptidase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.33 2.98 5 1 2 2 1 1 61.385 56.14 2;3 0.0033975 75892 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.148 47.214 116540000 20089000 84501000 8469900 0 0 0 0 0 0 0 0 0 0 0 3480200 21470 1771 19603 180405;180406;180407;180408;180409;180410 143768;143769;143770;143771 143770 2888 3 HGDGTTLDIMLK Unmodified 1299.6493 0.64928657 1771 P55786 NPEPPS Puromycin-sensitive aminopeptidase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 73.125 67.435 3 0.0012151 82508 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 78.692 63.063 68020000 12608000 44900000 10512000 0 0 0 0 0 0 0 0 0 0 0 0 21471 1771 19603 180411;180412;180413 143772;143773;143774 143774 3 HGDLPDIQIK Unmodified 1134.6033 0.60332266 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 58.771 57.355 2 3.1776E-27 64710 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 195.57 131.01 1092700000 101810000 27413000 68714000 0 0 107700000 0 0 60189000 84987000 89217000 155170000 88702000 97406000 211440000 21472 1986 19604 180414;180415;180416;180417;180418;180419;180420;180421;180422;180423;180424 143775;143776;143777;143778;143779;143780;143781;143782;143783;143784;143785;143786 143782 10 HGDPGDAAQQEAK Unmodified 1322.5851 0.58510641 207 O14737 PDCD5 Programmed cell death protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.7 3.55 6 2 19 2 4 2 1 1 1 2 1 2 2 2 2 1 2 2 7.6968 6.8845 2;3 5.2051E-271 5479 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 254.07 224.41 3415500000 88114000 2828000000 22502000 2273600 3218500 2738700 16855000 4500100 11842000 20541000 153860000 48223000 8692100 68426000 135710000 21473 207 19605 180425;180426;180427;180428;180429;180430;180431;180432;180433;180434;180435;180436;180437;180438;180439;180440;180441;180442;180443;180444;180445;180446;180447;180448;180449;180450;180451 143787;143788;143789;143790;143791;143792;143793;143794;143795;143796;143797;143798;143799;143800;143801;143802;143803;143804;143805;143806;143807;143808 143800 16 HGDVITIIDR Unmodified 1137.6142 0.6142217 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 55.295 55.321 2 0.01113 62934 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 66.299 45.352 52380000 0 0 0 6251800 3975700 5527200 5937800 4709000 4935100 0 0 0 7034700 0 14008000 21474 1492 19606 180452;180453;180454;180455;180456;180457;180458;180459 143809;143810;143811;143812 143811 4 HGEAQVK Unmodified 767.3926 0.3926016 1077 P18669;Q8N0Y7 PGAM1;PGAM4 Phosphoglycerate mutase 1;Probable phosphoglycerate mutase 4 yes no 0 0 0 By MS/MS 1 0 1 1 108.61 113.88 2 0.014549 95014 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 120.52 72.348 466630000 466630000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21475 1077 19607 180460 143813 143813 1 HGEEGVEAEK Unmodified 1083.4833 0.4832671 4465 Q9H993 ARMT1 Protein-glutamate O-methyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 3 1 7.1173 4.087 2 8.2412E-123 5914 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 223.84 166.56 308310000 27710000 268380000 12220000 0 0 0 0 0 0 0 0 0 0 0 0 21476 4465 19608 180461;180462;180463;180464;180465 143814;143815;143816;143817;143818;143819 143814 6 HGEIDYEAIVK Unmodified 1272.635 0.63501672 1898 P62333 PSMC6 26S protease regulatory subunit 10B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.04 3.41 6 1 21 2 3 2 1 2 2 1 1 2 2 2 2 2 2 2 58.888 57.552 2;3 1.2774E-19 75439 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 185.6 140.62 1304400000 48819000 535670000 124220000 22355000 33658000 64454000 15194000 15570000 15588000 68125000 108040000 143970000 27640000 26356000 54769000 21477 1898 19609 180466;180467;180468;180469;180470;180471;180472;180473;180474;180475;180476;180477;180478;180479;180480;180481;180482;180483;180484;180485;180486;180487;180488;180489;180490;180491;180492;180493 143820;143821;143822;143823;143824;143825;143826;143827;143828;143829;143830;143831;143832;143833;143834;143835;143836;143837;143838;143839;143840;143841;143842;143843;143844;143845;143846 143825 25 HGEPEEDIVGLQAFQER Unmodified 1952.9228 0.9228189 533 O75694 NUP155 Nuclear pore complex protein Nup155 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 76.291 76.483 3 2.9722E-05 88002 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.158 66.101 67207000 0 0 0 0 0 0 0 0 0 0 0 24113000 2235100 0 40859000 21478 533 19610 180494;180495;180496 143847;143848 143848 2 HGEPEEDIVGLQAFQERLNSYK Unmodified 2558.2401 0.24013029 533 O75694 NUP155 Nuclear pore complex protein Nup155 yes yes 0 0 1 By MS/MS 2 0 1 1 89.755 81.625 4 0.00026589 106072 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.663 59.62 16248000 16248000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21479 533 19611 180497 143849 143849 1 HGERDVEVER Unmodified 1224.5847 0.58471248 2501 Q15149 PLEC Plectin yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 9.6038 9.7342 3 0.0037993 8058 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 68.107 56.504 89887000 0 0 0 9552400 4386000 4750200 7175600 0 3760900 6602400 14192000 17885000 9766800 4413400 7402700 21480 2501 19612 180498;180499;180500;180501;180502;180503;180504;180505;180506;180507;180508 143850;143851;143852;143853 143853 3 HGESAWNLENR Unmodified 1311.5956 0.59561152 1077 P18669 PGAM1 Phosphoglycerate mutase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 1 1 1 1 1 2 2 2 2 3 2 36.507 36.782 2;3 3.6305E-127 38970 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 222.3 207.04 492860000 0 0 0 6920200 4212200 7675100 6504000 9824900 4867900 9309900 55295000 82266000 13813000 49430000 242740000 21481 1077 19613 180509;180510;180511;180512;180513;180514;180515;180516;180517;180518;180519;180520;180521;180522;180523;180524;180525;180526;180527 143854;143855;143856;143857;143858;143859;143860;143861;143862;143863;143864;143865;143866 143856 10 HGESEFNLLGK Unmodified 1229.6041 0.60405094 433 O60825 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 2 1 55.967 56.118 2 0.0013916 63312 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 73.067 52.196 46523000 0 0 0 0 0 13295000 0 11836000 10881000 0 0 0 0 10512000 0 21482 433 19614 180528;180529;180530;180531;180532 143867;143868;143869 143867 2 HGEVCPAGWK Unmodified 1139.5182 0.51821282 2131;2245 Q06830;Q13162 PRDX1;PRDX4 Peroxiredoxin-1;Peroxiredoxin-4 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.9 3.81 6 2 12 2 4 2 1 1 1 1 1 1 1 1 1 1 1 1 30.456 28.695 2;3 3.0573E-29 41260 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 205.36 159.34 3539600000 969360000 936940000 1096100000 14787000 7064000 31332000 9457000 11426000 24056000 25130000 82798000 63287000 30630000 66023000 171290000 21483 2131;2245 19615 180533;180534;180535;180536;180537;180538;180539;180540;180541;180542;180543;180544;180545;180546;180547;180548;180549;180550;180551;180552 143870;143871;143872;143873;143874;143875;143876;143877;143878;143879;143880;143881;143882;143883;143884;143885;143886;143887;143888;143889;143890;143891;143892;143893;143894;143895 143880 23 HGEVCPAGWKPGSDTIK Unmodified 1837.8781 0.87811731 2131 Q06830 PRDX1 Peroxiredoxin-1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 52.69 46.678 3 4.5456E-07 64454 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.428 68.585 41773000 36376000 0 5397900 0 0 0 0 0 0 0 0 0 0 0 0 21484 2131 19616 180553;180554 143896;143897;143898;143899 143898 4 HGEVCPAGWKPGSDTIKPDVQK Unmodified 2405.1798 0.17977864 2131 Q06830 PRDX1 Peroxiredoxin-1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.47 3.6 1 8 3 5 7 2 3 1 1 1 1 1 58.617 55.17 2;3;4;5 6.8888E-78 55741 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.38 106.27 5518100000 4362500000 214660000 78969000 0 0 0 0 29251000 0 0 0 204870000 60922000 128360000 438660000 21485 2131 19617 180555;180556;180557;180558;180559;180560;180561;180562;180563;180564;180565;180566;180567;180568;180569;180570;180571 143900;143901;143902;143903;143904;143905;143906;143907;143908;143909;143910;143911;143912;143913;143914;143915;143916;143917;143918;143919;143920;143921;143922;143923;143924;143925;143926;143927;143928;143929;143930;143931;143932;143933;143934 143906 32 HGEVCPAGWKPGSETIIPDPAGK Unmodified 2402.1689 0.1688796 2245 Q13162 PRDX4 Peroxiredoxin-4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.5 3.88 7 2 11 5 2 2 1 1 1 1 1 2 1 1 2 73.113 70.721 3;4 1.1681E-24 92731 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 103.26 99.459 982490000 404740000 258890000 103610000 0 0 0 1287500 4871500 3646700 8221300 14612000 41388000 6250200 17205000 117770000 21486 2245 19618 180572;180573;180574;180575;180576;180577;180578;180579;180580;180581;180582;180583;180584;180585;180586;180587;180588;180589;180590;180591 143935;143936;143937;143938;143939;143940;143941;143942;143943;143944;143945;143946 143943 9 HGFELVELSPEELPEEDDDFPESTGVK Unmodified 3043.3822 0.38222224 2946 Q6PD74 AAGAB Alpha- and gamma-adaptin-binding protein p34 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 92.822 86.994 3 6.8405E-34 110880 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.052 93.055 29718000 29718000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21487 2946 19619 180592;180593 143947;143948;143949 143949 3 HGFSDNQK Unmodified 931.41479 0.41479361 3570 Q8WW12 PCNP PEST proteolytic signal-containing nuclear protein yes yes 0 0 0 By matching By MS/MS By MS/MS 2.33 0.471 2 1 1 1 1 3.6885 0.74615 2 1.422E-40 1579 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 231.87 202.53 553180000 1202400 273060000 278920000 0 0 0 0 0 0 0 0 0 0 0 0 21488 3570 19620 180594;180595;180596 143950;143951 143951 1 HGGGGGGFGGGGFGSR Unmodified 1319.5755 0.57554478 79 CON__P35908v2;P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.86 0.971 1 50 1 4 4 5 3 6 5 3 5 3 5 4 3 28.779 28.865 2;3 4.9303E-231 29652 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 259.35 251.16 + 20210000000 0 2041600 0 1819400000 1608000000 1904300000 1265300000 2079300000 1352000000 1486600000 1997900000 2388700000 2178600000 1185700000 942580000 21489 79 19621 180597;180598;180599;180600;180601;180602;180603;180604;180605;180606;180607;180608;180609;180610;180611;180612;180613;180614;180615;180616;180617;180618;180619;180620;180621;180622;180623;180624;180625;180626;180627;180628;180629;180630;180631;180632;180633;180634;180635;180636;180637;180638;180639;180640;180641;180642;180643;180644;180645;180646;180647 143952;143953;143954;143955;143956;143957;143958;143959;143960;143961;143962;143963;143964;143965;143966;143967;143968;143969;143970;143971;143972;143973;143974;143975;143976;143977;143978;143979;143980;143981;143982;143983;143984;143985;143986;143987;143988;143989;143990;143991;143992;143993;143994;143995;143996;143997;143998;143999;144000;144001;144002;144003;144004;144005;144006;144007;144008;144009;144010;144011;144012 143972 50 HGGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGK Unmodified 2629.1865 0.18653159 2477 Q15022 SUZ12 Polycomb protein SUZ12 yes yes 0 0 0 By MS/MS 2 0 1 1 57.711 49.53 3 2.4009E-64 67567 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 106.61 99.421 25452000 25452000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21490 2477 19622 180648 144013;144014 144014 2 HGGGTESLFFDK Unmodified 1293.599 0.59896556 3994 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.78 3.58 5 13 2 1 2 1 1 1 1 1 1 2 1 1 1 1 1 57.662 55.961 2;3 2.7035E-44 78611 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 200.71 167.71 204380000 65555000 17536000 20218000 3072900 3079900 14960000 3587100 5384500 4933700 23348000 9902300 0 16849000 11717000 4237000 21491 3994 19623 180649;180650;180651;180652;180653;180654;180655;180656;180657;180658;180659;180660;180661;180662;180663;180664;180665;180666 144015;144016;144017;144018;144019;144020;144021;144022;144023;144024;144025;144026;144027;144028;144029;144030;144031;144032;144033 144023 16 HGGLDLTTNNSSSTTSSNTSK Unmodified 2107.9618 0.96178318 283 O15409 FOXP2 Forkhead box protein P2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 28.483 28.002 3 0.0011255 35505 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 44.238 38.658 19355000 0 0 2947500 0 0 0 0 0 0 4670200 6380200 0 0 0 5356700 21492 283 19624 180667;180668;180669;180670 144034;144035;144036 144036 3 HGGPGPGGPEPELSPITEGSEAR Unmodified 2227.0505 0.050538606 3542 Q8WUF5 PPP1R13L RelA-associated inhibitor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.605 59.715 3 1.8103E-66 67168 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.546 63.099 713890000 0 0 0 36008000 35811000 51500000 54118000 42446000 52144000 67904000 85325000 79171000 56860000 47974000 104630000 21493 3542 19625 180671;180672;180673;180674;180675;180676;180677;180678;180679;180680;180681;180682 144037;144038;144039;144040;144041;144042;144043;144044;144045;144046;144047;144048;144049;144050;144051;144052;144053 144043 17 HGGPKDEERHVGDLGNVTADK Unmodified 2230.0727 0.072671031 725 P00441 SOD1 Superoxide dismutase [Cu-Zn] yes yes 0 0 2 By MS/MS 2 0 1 1 39.529 32.906 4 7.3917E-09 45928 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.417 54.366 50611000 50611000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21494 725 19626 180683 144054 144054 1 HGGPSAPGALQPLTSGSAGPAQPGSVAGAGPGPTEGFTEK Unmodified 3596.7496 0.74955256 34 A7E2V4 ZSWIM8 Zinc finger SWIM domain-containing protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.24 2.35 2 19 2 1 1 1 1 2 2 2 2 2 2 2 1 76.551 76.385 3;4 6.4913E-93 87879 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.146 89.588 256330000 0 0 8234700 3095000 7916800 8860400 8425200 26865000 23067000 36854000 26508000 36367000 26554000 25084000 18501000 21495 34 19627 180684;180685;180686;180687;180688;180689;180690;180691;180692;180693;180694;180695;180696;180697;180698;180699;180700;180701;180702;180703;180704 144055;144056;144057;144058;144059;144060;144061;144062;144063;144064;144065;144066;144067;144068;144069;144070 144058 16 HGGQYMGQLK Oxidation (M) 1133.5288 0.52877751 3621 Q92547 TOPBP1 DNA topoisomerase 2-binding protein 1 yes yes 0 1 0 By MS/MS 2 0 1 1 14.836 10.787 2 0.0030882 16021 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.114 72.814 23774000 23774000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21496 3621 19628 180705 144071 144071 5121 1 HGGQYMGQLK Unmodified 1117.5339 0.53386288 3621 Q92547 TOPBP1 DNA topoisomerase 2-binding protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 29.999 24.379 2 0.00285 34118 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 100.02 75.094 26231000 26231000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21497 3621 19628 180706 144072 144072 1 HGGTIPIVPTAEFQDRISGASEK Unmodified 2409.2288 0.22883732 721 P00367 GLUD1 Glutamate dehydrogenase 1, mitochondrial yes yes 0 0 1 By MS/MS 2 0 2 2 82.731 74.601 3;4 0.00043651 97524 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.588 22.24 81715000 81715000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21498 721 19629 180707;180708 144073;144074 144073 2 HGGVNSSSPNTGNQDSK Unmodified 1684.7401 0.7401035 2755 Q5SQI0 ATAT1 Alpha-tubulin N-acetyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 5.961 6.0784 3 0.0014478 4118 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 31.647 25.731 24570000 0 0 0 2277100 1477900 1367600 1397700 1689700 1316700 2004800 3046700 3555400 2119800 1588300 2728100 21499 2755 19630 180709;180710;180711;180712;180713;180714;180715;180716;180717;180718;180719;180720 144075;144076 144076 2 HGHLCPIDTGLIEK Unmodified 1588.8032 0.80316145 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS 2.67 0.471 1 2 2 1 64.915 58.846 3 0.0091614 79892 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 28.779 18.727 25017000 22391000 2626300 0 0 0 0 0 0 0 0 0 0 0 0 0 21500 1201 19631 180721;180722;180723 144077;144078 144078 2 HGIDVRVLQTEQAVK Unmodified 1691.9319 0.93186744 4432 Q9H7C9 AAMDC Mth938 domain-containing protein yes yes 0 0 1 By MS/MS 2 0 1 1 67.937 59.642 3 0.042359 79798 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 31.319 14.44 16179000 16179000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21501 4432 19632 180724 144079 144079 1 HGIILNSEIATNGETSDTLNNVGYQGPTK Unmodified 3042.4894 0.4894217 2661 Q32MZ4 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.5 0.5 2 2 2 1 1 78.96 74.465 3 3.882E-08 95363 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.914 44.949 39847000 33681000 2694200 3472200 0 0 0 0 0 0 0 0 0 0 0 0 21502 2661 19633 180725;180726;180727;180728 144080;144081;144082 144081 2 HGINCFINR Unmodified 1129.5451 0.54509627 1980 P78371 CCT2 T-complex protein 1 subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 40.372 40.753 2 0.0031058 45069 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 133.9 116.66 173720000 0 0 0 0 0 15706000 0 11825000 0 17109000 22683000 37949000 23200000 0 45243000 21503 1980 19634 180729;180730;180731;180732;180733;180734;180735 144083;144084;144085;144086;144087 144085 5 HGIPFALATSSGSASFDMK Oxidation (M) 1938.9146 0.9145624 2161 Q08623 HDHD1 Pseudouridine-5'-phosphatase yes yes 0 1 0 By MS/MS 2 0 1 1 82.199 74.068 3 2.7816E-06 96990 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.793 63.417 39006000 39006000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21504 2161 19635 180736 144088;144089 144089 3476 2 HGIPTAQWK Unmodified 1036.5454 0.54541385 1134 P22102 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.47 2 1 14 1 1 2 1 1 1 1 1 1 2 1 1 1 37.071 36.777 2 2.3933E-05 40222 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 145.13 106.71 336040000 13260000 0 0 9541800 8794400 25340000 17694000 13373000 11716000 22615000 30551000 38253000 22019000 33320000 89559000 21505 1134 19636 180737;180738;180739;180740;180741;180742;180743;180744;180745;180746;180747;180748;180749;180750;180751 144090;144091;144092;144093;144094;144095;144096;144097;144098;144099;144100 144096 8 HGKEEPEEVQYK Unmodified 1471.6943 0.69432251 2823 Q5VW36 FOCAD Focadhesin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 14.686 14.842 3 0.00044395 13874 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 76.326 60.461 80141000 0 0 0 5419100 2845000 10544000 4934600 4200700 4962800 11655000 13503000 7668900 4899700 0 9507900 21506 2823 19637 180752;180753;180754;180755;180756;180757;180758;180759;180760;180761;180762 144101;144102;144103;144104;144105 144103 4 HGKPTDSTPATWK Unmodified 1424.7048 0.70482762 436 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 2 1 1 1 20.939 21.137 3 0.0043128 20276 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.6 22.812 132660000 0 0 0 11167000 0 20780000 0 0 13910000 0 0 43513000 0 0 43287000 21507 436 19638 180763;180764;180765;180766;180767;180768 144106;144107 144106 2 HGLAHDEMK Oxidation (M) 1052.4709 0.47092828 5122 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 0 1 0 By MS/MS 2 0 1 1 5.6916 2.3141 2 0.00096196 5193 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 140.09 109.48 58080000 58080000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21508 5122 19639 180769 144108 144108 6508 1 HGLEAISIMDSR Oxidation (M) 1343.6503 0.65034921 1210 P26640 VARS Valine--tRNA ligase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 47.926 48.11 3 0.0024955 53402 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.513 38.67 84811000 0 0 0 6780600 0 10428000 9190500 5162700 4636500 12701000 0 12307000 0 0 23605000 21509 1210 19640 180770;180771;180772;180773;180774;180775;180776;180777 144109;144110;144111;144112 144112 1775 4 HGLEAISIMDSR Unmodified 1327.6554 0.65543458 1210 P26640 VARS Valine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 2 65.254 65.534 2;3 0.0049299 74066 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83 59.571 60834000 0 0 0 0 0 8121200 0 3523800 2187200 4314700 7522100 8299700 0 4123900 22742000 21510 1210 19640 180778;180779;180780;180781;180782;180783;180784;180785;180786 144113;144114 144114 1 HGLEETAAK Unmodified 954.47706 0.47705951 3401 Q8NBQ5 HSD17B11 Estradiol 17-beta-dehydrogenase 11 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 8.0235 7.4332 2 4.2418E-09 5657 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 163.2 105.39 150830000 0 19455000 6772300 6519900 10794000 9921900 10883000 14546000 0 0 27426000 14744000 11403000 8851300 9513200 21511 3401 19641 180787;180788;180789;180790;180791;180792;180793;180794;180795;180796;180797;180798;180799;180800 144115;144116;144117;144118;144119;144120;144121;144122;144123 144118 9 HGLEVIYMIEPIDEYCVQQLK Unmodified 2576.2655 0.2654821 850 P07900 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.29 0.452 5 2 3 3 1 97.21 92.204 2;3 5.2439E-181 115541 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 291.51 272.44 630890000 514350000 114650000 1888300 0 0 0 0 0 0 0 0 0 0 0 0 21512 850 19642 180801;180802;180803;180804;180805;180806;180807 144124;144125;144126;144127;144128;144129;144130 144129 7 HGLEVIYMIEPIDEYCVQQLK Oxidation (M) 2592.2604 0.26039673 850 P07900 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.29 0.452 5 2 4 2 1 93.286 87.785 2;3 3.4211E-99 110906 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 169.62 146.61 316410000 258150000 53530000 4731600 0 0 0 0 0 0 0 0 0 0 0 0 21513 850 19642 180808;180809;180810;180811;180812;180813;180814 144131;144132;144133;144134;144135;144136 144134 1069 6 HGLLVPNNTTDQELQHIR Unmodified 2084.0763 0.076299846 1785 P56537 EIF6 Eukaryotic translation initiation factor 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 2 1 1 1 2 2 1 2 2 63.25 63.455 3;4 1.4798E-42 71380 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 146.78 135.48 243700000 0 0 0 2906700 0 20868000 0 14089000 10419000 8893900 18045000 31504000 19353000 24460000 93157000 21514 1785 19643 180815;180816;180817;180818;180819;180820;180821;180822;180823;180824;180825;180826;180827;180828;180829 144137;144138;144139;144140;144141;144142;144143;144144;144145;144146;144147;144148;144149;144150;144151;144152 144140 13 HGLPPSETIAIVEHINAK Unmodified 1925.0371 0.037060793 599 O94903 PROSC Proline synthase co-transcribed bacterial homolog protein yes yes 0 0 0 By MS/MS 2 0 1 1 84.243 76.113 3 0.00022356 99302 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.955 37.923 27386000 27386000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21515 599 19644 180830 144153 144153 1 HGLQSLGK Unmodified 838.4661 0.4661009 5216;1546;2736 Q5JSZ5;Q9Y520;P48634 PRRC2B;PRRC2C;PRRC2A Protein PRRC2B;Protein PRRC2C;Protein PRRC2A no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.813 14.98 2 0.0043105 14247 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 111.17 68.938 587750000 0 0 0 35580000 26047000 24320000 44813000 31917000 31197000 47115000 68161000 66038000 61718000 51527000 99315000 21516 2736;5216;1546 19645 180831;180832;180833;180834;180835;180836;180837;180838;180839;180840;180841;180842 144154;144155;144156;144157;144158;144159;144160;144161;144162;144163;144164 144155 10 HGLTEADVGITK Unmodified 1239.6459 0.64591575 3950 Q96PZ0 PUS7 Pseudouridylate synthase 7 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS 7.42 3.66 6 2 16 2 4 2 2 2 1 1 2 2 1 1 1 1 1 1 41.811 40.077 2;3 2.7329E-127 50486 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 273.44 232.56 403360000 8705800 101480000 148650000 12627000 11719000 5000300 5954400 10679000 11559000 11075000 14968000 18009000 10355000 9538000 23047000 21517 3950 19646 180843;180844;180845;180846;180847;180848;180849;180850;180851;180852;180853;180854;180855;180856;180857;180858;180859;180860;180861;180862;180863;180864;180865;180866 144165;144166;144167;144168;144169;144170;144171;144172;144173;144174;144175;144176;144177;144178;144179;144180 144176 13 HGLTEELLSR Unmodified 1153.6091 0.60913632 5004 Q9ULT8 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 52.346 52.679 2 0.011537 58705 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.066 36.826 70124000 0 0 0 0 0 3895700 0 0 4108900 4372100 5321900 16723000 4132100 2870700 28700000 21518 5004 19647 180867;180868;180869;180870;180871;180872;180873;180874 144181 144181 1 HGLTTYK Unmodified 818.42865 0.42865276 457 O75128 COBL Protein cordon-bleu yes yes 0 0 0 By MS/MS 2 0 1 1 13.287 11.006 2 0.021159 14094 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 110.54 75.43 8231800 0 0 8231800 0 0 0 0 0 0 0 0 0 0 0 0 21519 457 19648 180875 144182;144183 144183 2 HGLTYATIDGSVNPK Unmodified 1571.7944 0.79437091 5045 Q9UNY4 TTF2 Transcription termination factor 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 59.455 53.401 3 0.00023577 66656 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 83.877 70.897 25543000 16576000 0 8967000 0 0 0 0 0 0 0 0 0 0 0 0 21520 5045 19649 180876;180877 144184;144185;144186 144186 2 HGLYLPTR Unmodified 955.52395 0.52395013 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.063 41.241 2 0.0056089 45026 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 117.17 105.26 641390000 0 0 0 22375000 15461000 87802000 36209000 27396000 16696000 61313000 72215000 68869000 43255000 54710000 135090000 21521 1565 19650 180878;180879;180880;180881;180882;180883;180884;180885;180886;180887;180888;180889 144187;144188;144189;144190;144191;144192;144193;144194;144195;144196;144197;144198;144199 144195 13 HGNFGPHLDPK Unmodified 1217.5942 0.59415496 5073 Q9UQR0 SCML2 Sex comb on midleg-like protein 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 27.409 27.716 3 0.014962 30368 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 32.329 20.282 41229000 0 0 0 0 0 12858000 3809800 0 4620700 0 0 9557500 0 0 10383000 21522 5073 19651 180890;180891;180892;180893;180894 144200;144201;144202 144200 3 HGNLCLDK Unmodified 955.45455 0.45454993 271 O15294 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 15.604 15.805 2 0.0096273 15361 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 82.279 44.633 60555000 0 0 0 0 0 4449100 4188800 4932800 4969600 8882900 13187000 19944000 0 0 0 21523 271 19652 180895;180896;180897;180898;180899;180900;180901 144203;144204;144205;144206 144204 4 HGNLYDLK Unmodified 958.48723 0.48723027 954 P11717 IGF2R Cation-independent mannose-6-phosphate receptor yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 48.24 46.84 2 0.0068946 52779 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 91.906 53.115 458710000 7451400 193450000 4910800 6558400 16333000 15759000 22972000 37085000 22872000 30861000 43982000 44773000 0 3622100 8079800 21524 954 19653 180902;180903;180904;180905;180906;180907;180908;180909;180910;180911;180912;180913;180914;180915;180916 144207;144208;144209;144210;144211;144212;144213;144214;144215;144216;144217;144218 144212 11 HGNQYIQVNEPWK Unmodified 1611.7794 0.77938954 1779 P56192 MARS Methionine--tRNA ligase, cytoplasmic yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 60.227 60.405 3 0.0025738 68904 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 40.066 31.815 83399000 0 0 0 0 3201900 7306800 4225000 0 0 11822000 7596000 8994500 5399400 9214000 25640000 21525 1779 19654 180917;180918;180919;180920;180921;180922;180923;180924;180925 144219;144220;144221;144222;144223;144224 144219 6 HGNSHQGEPRDYSK Unmodified 1610.7186 0.7185802 72 CON__P13645;P13645 KRT10 Keratin, type I cytoskeletal 10 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.59 7 18 3 2 2 1 1 2 1 2 1 2 2 2 2 2 5.8604 5.2352 3;4 8.1104E-172 5995 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 199.38 170.84 + 1677500000 669430000 38916000 93200000 0 5373000 37344000 39411000 51626000 85201000 24373000 60403000 220580000 150840000 99730000 101070000 21526 72 19655 180926;180927;180928;180929;180930;180931;180932;180933;180934;180935;180936;180937;180938;180939;180940;180941;180942;180943;180944;180945;180946;180947;180948;180949;180950 144225;144226;144227;144228;144229;144230;144231;144232;144233;144234;144235;144236;144237;144238;144239;144240;144241;144242;144243 144236 11 HGNTDSEGIVEVK Unmodified 1383.663 0.66302238 800 P05156 CFI Complement factor I;Complement factor I heavy chain;Complement factor I light chain yes yes 0 0 0 By MS/MS 2 0 1 1 33.716 29.072 2 3.0215E-07 38078 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.44 57.281 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21527 800 19656 180951 144244 144244 1 HGPLALIDK Unmodified 962.55492 0.5549159 588 O94808 GFPT2 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 58.989 52.923 2 0.0080137 72514 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 91.318 48.195 32073000 28182000 0 3891500 0 0 0 0 0 0 0 0 0 0 0 0 21528 588 19657 180952;180953;180954 144245;144246;144247 144246 3 HGPLALVDK Unmodified 948.53927 0.53926584 2125 Q06210 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 6.76 3.89 1 4 2 10 4 2 1 1 1 1 1 1 1 1 1 1 1 47.319 45.644 2 0.0030441 53423 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 116.37 80.186 2282000000 1611100000 321530000 166120000 8289400 5136000 0 9311800 10527000 0 19183000 29715000 24209000 22143000 18651000 36124000 21529 2125 19658 180955;180956;180957;180958;180959;180960;180961;180962;180963;180964;180965;180966;180967;180968;180969;180970;180971 144248;144249;144250;144251;144252;144253;144254;144255;144256;144257 144256 8 HGPSLDNFLRK Unmodified 1282.6782 0.67821894 2722 Q5D1E8;Q9C0D7 ZC3H12A;ZC3H12C Ribonuclease ZC3H12A;Probable ribonuclease ZC3H12C yes no 0 0 1 By matching By MS/MS 10 0 2 1 1 53.704 54.067 3 0.0033529 60165 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.821 22.563 10421000 0 0 0 0 0 2462700 0 0 0 0 0 0 0 0 7957900 21530 2722 19659 180972;180973 144258 144258 1 HGQFTLR Unmodified 857.45079 0.45078518 1826 P61011 SRP54 Signal recognition particle 54 kDa protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 24.188 24.38 2 0.017197 26203 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 114.43 91.695 442180000 0 0 0 28805000 26507000 46169000 24469000 46564000 15110000 40917000 36060000 53674000 62875000 0 61033000 21531 1826 19660 180974;180975;180976;180977;180978;180979;180980;180981;180982;180983;180984 144259;144260 144260 2 HGQLANEAAFLPVPQK Unmodified 1718.9104 0.91040372 4882 Q9UGK8 SERGEF Secretion-regulating guanine nucleotide exchange factor yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 77.798 72.351 3 5.9616E-46 93843 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 122.33 112.79 49546000 36879000 0 12667000 0 0 0 0 0 0 0 0 0 0 0 0 21532 4882 19661 180985;180986 144261;144262;144263 144262 3 HGQNIRDVSNK Unmodified 1266.6429 0.64289606 3256 Q8IX90 SKA3 Spindle and kinetochore-associated protein 3 yes yes 0 0 1 By MS/MS 2 0 1 1 10.03 6.255 3 0.020918 10239 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.37 32.933 45281000 45281000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21533 3256 19662 180987 144264 144264 1 HGRPGIGATHSSR Unmodified 1331.6807 0.68067855 1915 P62841 RPS15 40S ribosomal protein S15 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 6.6618 6.7931 3 6.1413E-05 4677 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 83.087 74.983 308480000 0 0 0 4776100 1307900 12655000 0 15278000 15824000 23906000 28854000 54878000 56695000 34059000 60245000 21534 1915 19663 180988;180989;180990;180991;180992;180993;180994;180995;180996;180997;180998 144265;144266;144267;144268;144269;144270 144270 6 HGSASFVSLLK Unmodified 1144.6241 0.6240581 4733 Q9NXV6 CDKN2AIP CDKN2A-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 69.187 68.239 2 0.007817 93413 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.787 35.452 65989000 12307000 0 0 0 0 6200800 0 0 7482000 9021000 5119800 11153000 0 0 14705000 21535 4733 19664 180999;181000;181001;181002;181003;181004;181005 144271;144272;144273;144274 144273 2 HGSFVNKPTR Unmodified 1141.5992 0.59924033 1245 P29353 SHC1 SHC-transforming protein 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 10.332 10.504 3 0.001184 9684 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 73.887 54.93 70268000 0 0 0 0 2774100 7841900 0 0 0 9212900 9325900 13233000 9609800 0 18270000 21536 1245 19665 181006;181007;181008;181009;181010;181011;181012;181013 144275;144276;144277;144278;144279;144280;144281;144282;144283 144277 7 HGSGLGHSSSHGQHGSGSGR Unmodified 1884.8324 0.83238118 104 CON__Q86YZ3;Q86YZ3 HRNR Hornerin yes no 0 0 0 By matching By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 5.808 5.9958 4 0.0030882 3537 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 30.428 24.768 + 12279000 0 0 0 0 0 0 0 478260 0 0 0 3008700 2736500 0 6055100 21537 104 19666 181014;181015;181016;181017 144284 144284 1 HGSGPNIILTGDSSPGFSK Unmodified 1869.9221 0.92209062 2697 Q53ET0 CRTC2 CREB-regulated transcription coactivator 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 64.674 64.941 3 0.0011818 73697 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 42.309 39.496 36296000 0 0 0 0 0 0 7340100 7209600 0 0 0 0 0 9502300 12244000 21538 2697 19667 181018;181019;181020;181021 144285;144286;144287;144288;144289 144288 4 HGSGSGHSSSYGQHGSGSGWSSSSGR Unmodified 2476.0137 0.013652602 104 CON__Q86YZ3;Q86YZ3 HRNR Hornerin yes no 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 14 1 2 1 3 4 1 2 16.195 16.478 4 8.0862E-07 13362 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 43.633 41.962 + 80212000 0 0 0 0 0 2642700 0 8556400 0 1297400 0 22113000 32338000 3687400 9577400 21539 104 19668 181022;181023;181024;181025;181026;181027;181028;181029;181030;181031;181032;181033;181034;181035 144290;144291;144292;144293;144294;144295;144296 144294 6 HGSGSGQSSSYGPYGSGSGWSSSR Unmodified 2317.9584 0.95842913 104 CON__Q86YZ3;Q86YZ3 HRNR Hornerin yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.151 40.33 3 2.3267E-125 44692 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 179.17 178.82 + 318120000 0 0 0 16264000 12101000 22814000 10116000 98799000 12560000 33513000 20352000 40947000 17489000 12775000 20386000 21540 104 19669 181036;181037;181038;181039;181040;181041;181042;181043;181044;181045;181046;181047 144297;144298;144299;144300;144301;144302;144303;144304;144305;144306;144307;144308;144309;144310;144311;144312;144313;144314 144306 18 HGSGSGQSSSYGPYR Unmodified 1525.6546 0.65458296 104 CON__Q86YZ3;Q86YZ3 HRNR Hornerin yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 23 2 2 2 2 2 2 2 2 2 2 2 1 15.618 15.775 2;3 8.3761E-24 15279 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 123.95 118.1 + 420500000 0 0 0 47106000 16304000 21000000 16263000 85474000 20289000 34420000 34802000 55972000 43292000 28525000 17056000 21541 104 19670 181048;181049;181050;181051;181052;181053;181054;181055;181056;181057;181058;181059;181060;181061;181062;181063;181064;181065;181066;181067;181068;181069;181070 144315;144316;144317;144318;144319;144320;144321;144322;144323;144324;144325;144326;144327;144328 144326 11 HGSGSGQSSSYSPYGSGSGWSSSR Unmodified 2347.969 0.96899382 104 CON__Q86YZ3;Q86YZ3 HRNR Hornerin yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 2 1 1 1 2 2 1 1 39.639 39.878 2;3 6.753E-46 44295 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 102.29 100.93 + 357240000 0 0 0 23788000 17256000 22898000 0 126900000 11477000 33517000 24051000 39024000 28688000 15047000 14599000 21542 104 19671 181071;181072;181073;181074;181075;181076;181077;181078;181079;181080;181081;181082;181083;181084 144329;144330;144331;144332;144333;144334;144335;144336;144337;144338;144339;144340;144341;144342;144343 144329 15 HGSGTQYVSTR Unmodified 1191.5632 0.56324876 3748 Q96B23 C18orf25 Uncharacterized protein C18orf25 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 10.988 11.103 2 0.01238 10053 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 47.603 33.446 30948000 0 0 0 1203100 1316700 1713200 2012600 1231600 1550700 1948600 0 5364200 3398600 3353400 7855100 21543 3748 19672 181085;181086;181087;181088;181089;181090;181091;181092;181093;181094;181095 144344;144345;144346;144347 144347 4 HGSLGFLPR Unmodified 982.53485 0.53484916 1402 P39023 RPL3 60S ribosomal protein L3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 52.959 53.053 2 1.9074E-38 58896 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 186.13 128.85 489680000 0 0 0 31974000 16586000 50867000 27294000 25192000 40388000 33453000 48478000 60101000 92934000 62411000 0 21544 1402 19673 181096;181097;181098;181099;181100;181101;181102;181103;181104;181105;181106 144348;144349;144350;144351;144352;144353;144354;144355;144356;144357;144358 144356 11 HGSLGSSIK Unmodified 884.47158 0.4715802 4995 Q9ULH7 MKL2 MKL/myocardin-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 5.57 3.85 3 1 3 1 2 1 1 1 1 12.732 10.972 2 6.4419E-06 14489 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 156.75 94.096 312420000 215790000 36789000 51973000 0 0 0 0 0 0 2509700 907690 0 0 0 4452500 21545 4995 19674 181107;181108;181109;181110;181111;181112;181113 144359;144360;144361;144362;144363;144364 144364 4 HGSNIEAMSK Unmodified 1072.4971 0.49714303 4207 Q9BWD1 ACAT2 Acetyl-CoA acetyltransferase, cytosolic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 12.393 12.641 2 6.757E-12 11041 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 176.6 132.48 33442000 0 0 0 5245200 0 0 0 0 0 0 10049000 0 0 0 18148000 21546 4207 19675 181114;181115;181116 144365;144366 144365 1 HGSNIEAMSK Oxidation (M) 1088.4921 0.49205765 4207 Q9BWD1 ACAT2 Acetyl-CoA acetyltransferase, cytosolic yes yes 0 1 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 5.673 5.8253 2 0.00037572 3668 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 123.51 98.376 51097000 0 0 0 0 1231500 0 2039300 2212600 1775300 0 7483800 8516600 3258800 7412900 17166000 21547 4207 19675 181117;181118;181119;181120;181121;181122;181123;181124;181125 144367;144368;144369 144369 5683 3 HGSSQVWK Unmodified 927.45626 0.45626449 95 CON__Q5D862;Q5D862 FLG2 Filaggrin-2 yes no 0 0 0 By MS/MS By matching By MS/MS By matching 10 0 4 1 1 1 1 10.48 10.605 2 0.028761 9430 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 56.547 32.575 + 11133000 0 0 0 3315600 0 1525300 0 0 0 0 0 5094200 0 0 1197700 21548 95 19676 181126;181127;181128;181129 144370 144370 1 HGSSSGSSSSYGQHGSGSR Unmodified 1807.747 0.7469798 104 CON__Q86YZ3;Q86YZ3 HRNR Hornerin yes no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching 10 0 21 4 1 1 1 3 3 1 2 1 1 2 1 3.1279 3.2354 3;4 2.5354E-17 2066 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 107.03 102.71 + 63919000 0 0 0 3793400 1861100 2769900 3061700 42883000 3522800 1639800 1968900 1553800 290440 383920 190000 21549 104 19677 181130;181131;181132;181133;181134;181135;181136;181137;181138;181139;181140;181141;181142;181143;181144;181145;181146;181147;181148;181149;181150 144371;144372;144373;144374;144375;144376;144377;144378 144375 7 HGSSSVELR Unmodified 970.48321 0.48320752 95 CON__Q5D862;Q5D862 FLG2 Filaggrin-2 yes no 0 0 0 By MS/MS By matching By matching By matching By MS/MS By matching 10 0 6 1 1 1 1 1 1 10.872 10.99 2 0.005209 9541 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 80.229 48.294 + 17138000 0 0 0 3705300 0 0 3443500 0 1628200 2188100 0 5746200 426470 0 0 21550 95 19678 181151;181152;181153;181154;181155;181156 144379 144379 1 HGSYEDAVHSGALND Unmodified 1570.6648 0.6648133 1067 P17987 TCP1 T-complex protein 1 subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.09 3.31 5 3 24 2 4 2 2 2 2 2 2 2 2 2 2 2 2 2 37.629 36.558 2;3 5.4899E-287 46378 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 352.04 343.81 4458400000 54108000 2126400000 850820000 43495000 40260000 126800000 65620000 65645000 50725000 119970000 150730000 162930000 114570000 144240000 342100000 21551 1067 19679 181157;181158;181159;181160;181161;181162;181163;181164;181165;181166;181167;181168;181169;181170;181171;181172;181173;181174;181175;181176;181177;181178;181179;181180;181181;181182;181183;181184;181185;181186;181187;181188 144380;144381;144382;144383;144384;144385;144386;144387;144388;144389;144390;144391;144392;144393;144394;144395;144396;144397;144398;144399;144400;144401;144402;144403;144404;144405;144406;144407;144408;144409;144410;144411;144412;144413 144385 30 HGTDFLEYK Unmodified 1108.5189 0.51892433 522 O75592 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 yes yes 0 0 0 By MS/MS 2 0 1 1 51.224 47.303 2 0.022185 59514 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 73.26 51.96 3483900 0 0 3483900 0 0 0 0 0 0 0 0 0 0 0 0 21552 522 19680 181189 144414 144414 1 HGVESTLER Unmodified 1026.5094 0.50942227 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 16.069 16.21 2 2.2941E-09 16279 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 163.9 123.69 1454400000 0 0 0 63788000 78038000 94850000 102740000 95542000 70988000 127020000 0 189350000 191340000 220460000 220250000 21553 2102 19681 181190;181191;181192;181193;181194;181195;181196;181197;181198;181199;181200 144415;144416;144417;144418;144419;144420;144421;144422;144423;144424;144425;144426 144415 7 HGVGLDVPPIFR Unmodified 1305.7194 0.71935547 2165 Q08AF3 SLFN5 Schlafen family member 5 yes yes 0 0 0 By matching By matching By MS/MS By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 82.051 82.18 3 0.00019992 94637 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.261 74.374 12347000 0 0 0 0 0 1720900 0 999550 1292500 1718000 0 0 903870 0 5712200 21554 2165 19682 181201;181202;181203;181204;181205;181206 144427 144427 1 HGVIVAADSR Unmodified 1023.5461 0.54614213 1231 P28074 PSMB5 Proteasome subunit beta type-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 18.325 18.752 2 0.005999 17741 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.692 45.993 12531000 0 0 0 0 0 0 0 1216000 0 0 1641600 1702600 0 1392500 6578900 21555 1231 19683 181207;181208;181209;181210;181211 144428;144429 144428 2 HGVQELEIELQSQLSK Unmodified 1836.9581 0.95814177 1354 P35527;CON__P35527 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 82.942 82.109 3 0.00061303 95189 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 39.348 32.778 + 48197000 5980600 0 0 3906600 0 2560100 0 6714300 4505500 6605400 3648300 6401600 0 0 7874500 21556 1354 19684 181212;181213;181214;181215;181216;181217;181218;181219;181220 144430;144431;144432;144433;144434;144435;144436 144430 6 HGVVPLATYMR Unmodified 1242.6543 0.65431237 1509 P46778 RPL21 60S ribosomal protein L21 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 17 2 1 2 2 1 1 1 1 2 2 2 63.473 63.622 2;3 0.011977 71609 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.563 47.147 112950000 0 0 0 0 3264700 4974700 5059900 9457400 3206300 8065600 7942600 18722000 13523000 15773000 22963000 21557 1509 19685 181221;181222;181223;181224;181225;181226;181227;181228;181229;181230;181231;181232;181233;181234;181235;181236;181237 144437;144438 144437 2 HGVVPLATYMR Oxidation (M) 1258.6492 0.64922699 1509 P46778 RPL21 60S ribosomal protein L21 yes yes 0 1 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 47.371 47.477 3 0.0044588 53266 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 44.639 34.952 94328000 0 0 0 5698600 4479400 8711200 0 0 0 12547000 14592000 22468000 15272000 10559000 0 21558 1509 19685 181238;181239;181240;181241;181242;181243;181244;181245 144439;144440;144441 144441 2388 3 HGVVTSGPGGEDPLDGQMGVSTNSSSHPMSSK 2 Oxidation (M) 3170.3881 0.38806945 2558 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 0 2 0 By MS/MS 2 0 1 1 48.671 44.769 4 1.5392E-20 56468 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 74.3 72.047 7650300 0 0 7650300 0 0 0 0 0 0 0 0 0 0 0 0 21559 2558 19686 181246 144442 144442 4210;4211 1 HGVYNPNK Unmodified 927.45626 0.45626449 1423 P40926 MDH2 Malate dehydrogenase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS 6.9 3.81 3 1 6 1 2 1 1 1 1 1 1 1 7.5342 6.3712 2 0.0008103 8065 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 163.84 125.04 1322500000 748130000 318370000 246240000 3051400 0 0 615860 1195800 0 0 1226700 858960 0 0 2785600 21560 1423 19687 181247;181248;181249;181250;181251;181252;181253;181254;181255;181256 144443;144444;144445;144446;144447;144448;144449 144443 7 HGYAPSDLPVK Unmodified 1182.6033 0.60332266 5244 Q9Y5Q8 GTF3C5 General transcription factor 3C polypeptide 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 45.361 44.082 2 1.9852E-09 55919 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 155.07 119.77 583550000 38580000 150810000 125920000 11765000 16961000 26489000 21231000 15768000 18085000 27087000 27455000 24840000 21044000 22201000 35323000 21561 5244 19688 181257;181258;181259;181260;181261;181262;181263;181264;181265;181266;181267;181268;181269;181270;181271;181272 144450;144451;144452;144453;144454;144455;144456;144457;144458;144459;144460;144461;144462;144463;144464;144465;144466;144467;144468;144469;144470 144465 21 HGYIGEFEIIDDHRAGK Unmodified 1955.949 0.94897407 1878 P62244 RPS15A 40S ribosomal protein S15a yes yes 0 0 1 By MS/MS 2 0 1 1 76.02 67.889 4 0.0002769 89474 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.82 67.258 53066000 53066000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21562 1878 19689 181273 144471 144471 1 HGYIPGK Unmodified 770.40752 0.40752338 5008 Q9ULV4 CORO1C Coronin-1C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 17.378 16.563 2 0.024056 25230 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 103.41 60.636 2927000000 1602300000 292770000 789300000 8244500 7530000 13434000 10767000 6194000 9051600 14467000 27481000 38861000 12898000 28634000 65125000 21563 5008 19690 181274;181275;181276;181277;181278;181279;181280;181281;181282;181283;181284;181285;181286;181287;181288;181289 144472;144473;144474;144475;144476;144477;144478;144479;144480 144477 9 HHAAYVNNLNVTEEK Unmodified 1737.8434 0.84344636 776 P04179 SOD2 Superoxide dismutase [Mn], mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2 0 4 3 1 43.405 37.625 2;3;4 1.4325E-25 51886 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 122.55 108.09 128190000 124020000 0 4170800 0 0 0 0 0 0 0 0 0 0 0 0 21564 776 19691 181290;181291;181292;181293 144481;144482;144483;144484 144483 4 HHFDQPSVAPGK Unmodified 1318.6418 0.64183343 4813 Q9P2B7 CFAP97 Cilia- and flagella-associated protein 97 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 25.313 23.915 3 0.0050578 33934 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.475 28.029 30850000 15581000 0 1607000 2545500 0 0 3009000 0 3469800 0 0 0 0 4638600 0 21565 4813 19692 181294;181295;181296;181297;181298;181299 144485;144486 144486 2 HHIANANLMR Unmodified 1175.5982 0.59819448 1569 P49366 DHPS Deoxyhypusine synthase yes yes 0 0 0 By MS/MS 10 0 1 1 22.61 23.267 3 0.032078 23398 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.591 22.912 5103900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5103900 21566 1569 19693 181300 144487 144487 1 HHIETGGGQLPAK Unmodified 1343.6946 0.69459728 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 1 1 1 1 1 2 2 1 1 2 19.067 19.332 2;3 9.0388E-08 19311 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 90.614 70.407 349410000 0 0 0 13782000 18407000 33860000 27630000 31756000 16677000 35318000 25666000 42695000 18132000 21407000 64078000 21567 3641 19694 181301;181302;181303;181304;181305;181306;181307;181308;181309;181310;181311;181312;181313;181314;181315 144488;144489;144490;144491;144492;144493;144494;144495;144496;144497;144498 144493 5 HHISIAEIYETELVDIEK Unmodified 2138.0895 0.089549874 1750 P54920 NAPA Alpha-soluble NSF attachment protein yes yes 0 0 0 By MS/MS 2 0 2 2 95.528 87.398 3;4 4.0246E-05 113169 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.013 69.967 10627000 10627000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21568 1750 19695 181316;181317 144499;144500 144500 2 HHPEDVEPALRK Unmodified 1426.7317 0.73171107 999 P14550 AKR1A1 Alcohol dehydrogenase [NADP(+)] yes yes 0 0 1 By MS/MS By matching By MS/MS 5.75 4.26 1 1 2 2 1 1 44.308 44.587 3 0.0010035 31526 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.625 63.816 90873000 69001000 0 0 0 0 0 0 0 0 0 0 7146800 0 0 14726000 21569 999 19696 181318;181319;181320;181321 144501;144502;144503 144503 3 HHSLALTSFK Unmodified 1139.6087 0.60874239 4133 Q9BSV6 TSEN34 tRNA-splicing endonuclease subunit Sen34 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 42.795 43.191 3 0.0057913 46792 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 44.57 37.468 37726000 0 0 0 0 0 3600900 0 5434000 0 0 0 6362700 0 4836600 17492000 21570 4133 19697 181322;181323;181324;181325;181326 144504;144505;144506;144507 144507 4 HHSLGGQYGVQGFPTIK Unmodified 1824.9271 0.92711641 2496 Q15084 PDIA6 Protein disulfide-isomerase A6 yes yes 0 0 0 By MS/MS By MS/MS 6.5 3.5 1 1 1 1 67.998 65.978 3 0.00019959 73876 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.466 48.807 12709000 0 2227600 0 0 0 0 0 0 0 0 0 0 0 0 10482000 21571 2496 19698 181327;181328 144508;144509 144508 2 HHSVAEEETLEK Unmodified 1407.663 0.66302238 2097 Q03468 ERCC6 DNA excision repair protein ERCC-6 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18.639 18.252 3 4.2408E-06 16448 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 110.08 92.71 157230000 16712000 0 15509000 11191000 5372000 7632900 6369600 6048500 4765600 8907900 10859000 20772000 15866000 12021000 15201000 21572 2097 19699 181329;181330;181331;181332;181333;181334;181335;181336;181337;181338;181339;181340;181341;181342 144510;144511;144512;144513;144514;144515;144516;144517;144518;144519;144520;144521;144522;144523;144524 144519 15 HHVPSDFNVNVK Unmodified 1391.6946 0.69459728 106 Q9C075;CON__Q9C075 KRT23 Keratin, type I cytoskeletal 23 yes no 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 39.881 40.494 3 0.0010724 44358 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 65.842 58.162 + 34860000 0 0 0 0 0 0 0 0 0 0 0 18111000 3259900 0 13489000 21573 106 19700 181343;181344;181345 144525;144526 144526 2 HHYEQQQEDLAR Unmodified 1552.7019 0.7018675 2451;2201 Q12873;Q14839 CHD3;CHD4 Chromodomain-helicase-DNA-binding protein 3;Chromodomain-helicase-DNA-binding protein 4 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 2 1 1 2 1 1 2 15.131 15.358 2;3 2.905E-05 13443 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.249 83.098 307160000 0 0 0 0 3792800 13193000 1220500 11239000 0 17679000 26588000 67180000 46680000 22813000 96777000 21574 2201;2451 19701 181346;181347;181348;181349;181350;181351;181352;181353;181354;181355;181356;181357;181358 144527;144528;144529;144530;144531;144532;144533;144534;144535;144536;144537;144538;144539 144531 13 HHYESLQTAK Unmodified 1212.5887 0.58873523 162 O00499 BIN1 Myc box-dependent-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 11.005 11.222 3 0.0039444 9779 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 50.978 40.669 76434000 0 0 0 3036700 0 0 0 4613900 0 0 8975000 18654000 11098000 0 30057000 21575 162 19702 181359;181360;181361;181362;181363;181364;181365 144540;144541;144542;144543 144543 3 HIAAEEVSK Unmodified 982.50836 0.50835964 395 O60318 MCM3AP Germinal-center associated nuclear protein yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 11.462 11.699 2 0.0071238 9870 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.26 34.468 30282000 0 0 0 0 0 2458100 0 2862600 0 3023400 2395000 8688500 3833500 3678000 3342400 21576 395 19703 181366;181367;181368;181369;181370;181371;181372;181373 144544;144545;144546;144547;144548 144545 5 HIAEEADR Unmodified 939.44101 0.44100836 1957;831 P06753;P67936 TPM3;TPM4 Tropomyosin alpha-3 chain;Tropomyosin alpha-4 chain no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 6.4411 6.5747 2 0.017693 4744 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 65.252 34.534 20579000 0 0 0 1831900 1933200 0 1298400 2057800 0 1138900 3207200 1984800 1497700 2157100 3472300 21577 831;1957 19704 181374;181375;181376;181377;181378;181379;181380;181381;181382;181383 144549;144550;144551 144550 3 HIAEEADRK Unmodified 1067.536 0.53597137 1957;831 P06753;P67936 TPM3;TPM4 Tropomyosin alpha-3 chain;Tropomyosin alpha-4 chain no no 0 0 1 By MS/MS By MS/MS By MS/MS 1.8 0.4 1 4 3 1 1 26.768 25.367 2 7.1701E-11 5334 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 191.78 122.6 1223600000 518630000 155540000 549460000 0 0 0 0 0 0 0 0 0 0 0 0 21578 831;1957 19705 181384;181385;181386;181387;181388 144552;144553;144554;144555;144556 144552 4 HIAEEADRKYEEVAR Unmodified 1814.8911 0.89112484 1957;831 P06753;P67936 TPM3;TPM4 Tropomyosin alpha-3 chain;Tropomyosin alpha-4 chain no no 0 0 2 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 2 1 1 2 31.79 32.234 3;4 0.0038686 33435 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.011 50.839 90054000 0 0 0 0 0 0 0 4401000 1836600 0 8436000 22216000 9635900 5903800 37625000 21579 831;1957 19706 181389;181390;181391;181392;181393;181394;181395;181396;181397 144557;144558;144559;144560 144558 2 HIAEVSQEVTR Unmodified 1267.6521 0.65206377 1857 P61764 STXBP1 Syntaxin-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 7.89 3.52 5 14 2 2 1 1 2 2 1 1 1 1 2 1 1 1 28.263 27.66 2;3 0.00036085 29616 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 81.017 64.763 162680000 11016000 29074000 35711000 2089000 4613500 21056000 3228900 2853400 0 7395900 5722800 21360000 4795100 4043700 9719000 21580 1857 19707 181398;181399;181400;181401;181402;181403;181404;181405;181406;181407;181408;181409;181410;181411;181412;181413;181414;181415;181416 144561;144562;144563;144564;144565;144566;144567;144568;144569 144561 8 HIAEVSQEVTRSLK Unmodified 1595.8631 0.86311917 1857 P61764 STXBP1 Syntaxin-binding protein 1 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 55.948 49.162 3 4.7499E-59 67312 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 197.19 183.78 207180000 207180000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21581 1857 19708 181417;181418 144570;144571;144572;144573;144574 144572 4 HIAFTPESQRR Unmodified 1340.6949 0.69493163 2727 Q5H9R7 PPP6R3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 25.38 25.657 3 0.011856 27165 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 39.179 31.898 29066000 0 0 0 0 0 0 0 0 0 7370700 0 0 16832000 4863600 0 21582 2727 19709 181419;181420;181421;181422 144575;144576;144577 144577 3 HIANYISGIQTIGHR Unmodified 1678.8903 0.89033698 2528 Q15393 SF3B3 Splicing factor 3B subunit 3 yes yes 0 0 0 By MS/MS 10 0 1 1 63.507 64.07 3 4.329E-06 72500 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.675 58.094 12724000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12724000 21583 2528 19710 181423 144578 144578 1 HIASDVGR Unmodified 853.44061 0.44061443 3517 Q8TEQ0 SNX29 Sorting nexin-29 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 8.0577 8.0936 2 0.02755 6089 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 57.281 18.489 13987000 0 0 0 1540600 1643600 1794800 1724100 2863200 1330900 0 0 0 3089700 0 0 21584 3517 19711 181424;181425;181426;181427;181428;181429;181430 144579 144579 1 HIASGGNGLAWK Unmodified 1209.6255 0.62545508 2932 Q6P3W7 SCYL2 SCY1-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 38.022 38.38 2 0.00076974 42777 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 87.913 58.826 44182000 0 0 0 0 0 0 3133900 6305000 0 5147100 0 6966600 5530800 4569700 12529000 21585 2932 19712 181431;181432;181433;181434;181435;181436;181437;181438 144580;144581;144582;144583;144584;144585;144586;144587 144584 8 HIAVFPCK Unmodified 970.50586 0.50585722 437 O60841 EIF5B Eukaryotic translation initiation factor 5B yes yes 0 0 0 By MS/MS 2 0 1 1 46.304 42.452 2 0.023561 53468 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 82.263 61.708 3488900 0 0 3488900 0 0 0 0 0 0 0 0 0 0 0 0 21586 437 19713 181439 144588 144588 1 HICGEDQIEDK Unmodified 1342.5823 0.58232922 3436 Q8NEZ4 KMT2C Histone-lysine N-methyltransferase 2C yes yes 0 0 0 By MS/MS 3 0 1 1 24.529 20.481 2 0.020691 25572 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 58.676 53.31 1329500 0 1329500 0 0 0 0 0 0 0 0 0 0 0 0 0 21587 3436 19714 181440 144589 144589 1 HIDCAAIYGNEPEIGEALK Unmodified 2098.9994 0.99935466 999 P14550 AKR1A1 Alcohol dehydrogenase [NADP(+)] yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 77.673 74.618 3 0.0005365 89488 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 41.348 26.093 7044700 0 2564100 4480600 0 0 0 0 0 0 0 0 0 0 0 0 21588 999 19715 181441;181442 144590;144591;144592;144593 144591 4 HIDFSLR Unmodified 886.4661 0.4661009 1511 P46781 RPS9 40S ribosomal protein S9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 51.216 51.454 2 0.0022316 57192 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 154.92 54.646 655920000 0 0 0 0 20905000 68194000 0 67793000 44495000 47995000 52450000 93292000 117550000 45254000 97996000 21589 1511 19716 181443;181444;181445;181446;181447;181448;181449;181450;181451;181452 144594;144595;144596;144597 144597 2 HIDIDPNNAHILDGNAADLQAECDAFENK Unmodified 3219.4527 0.45271862 3506 Q8TDQ7 GNPDA2 Glucosamine-6-phosphate isomerase 2 yes yes 0 0 0 By MS/MS 2 0 1 1 85.234 77.104 4 3.4229E-67 100671 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 122.78 116.29 23395000 23395000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21590 3506 19717 181453 144598 144598 1 HIDIHPENTHILDGNAVDLQAECDAFEEK Unmodified 3329.5259 0.52588356 1514 P46926 GNPDA1 Glucosamine-6-phosphate isomerase 1 yes yes 0 0 0 By MS/MS 2.25 0.433 3 1 4 83.855 76.834 3;4;5 6.9058E-164 99578 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 178.91 169.45 214200000 214200000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21591 1514 19718 181454;181455;181456;181457 144599;144600;144601;144602 144601 2 HIDMVEGDEGR Unmodified 1256.5455 0.54554978 1702 P52789 HK2 Hexokinase-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 25.995 26.301 2 0.00039146 26734 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.898 77.684 20295000 0 0 0 1771500 0 0 0 1736200 1130700 2615800 2692300 2321800 2276200 2174700 3575300 21592 1702 19719 181458;181459;181460;181461;181462;181463;181464;181465;181466;181467 144603;144604;144605;144606;144607;144608;144609;144610 144605 8 HIDPVVLK Unmodified 919.5491 0.54910224 4842 Q9UBI1 COMMD3 COMM domain-containing protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.87 3.54 4 11 2 1 1 1 1 1 1 1 1 1 1 1 1 1 43.004 41.49 2 0.0065618 59480 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 139.28 68.367 550580000 150380000 121590000 140370000 0 4731300 14627000 10313000 8536000 6370000 16764000 16917000 13911000 14110000 10205000 21756000 21593 4842 19720 181468;181469;181470;181471;181472;181473;181474;181475;181476;181477;181478;181479;181480;181481;181482 144611;144612;144613;144614;144615;144616;144617;144618;144619;144620;144621;144622;144623;144624 144616 9 HIDSEFEENTNLK Unmodified 1574.7213 0.72126554 3196 Q86XK3 SFR1 Swi5-dependent recombination DNA repair protein 1 homolog yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 48.528 43.639 3 0.0029936 57289 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.641 80.439 3301400 0 3301400 0 0 0 0 0 0 0 0 0 0 0 0 0 21594 3196 19721 181483;181484 144625;144626 144625 1 HIEDTGSTPSIGENDLK Unmodified 1811.8537 0.85373628 2966 Q6R327 RICTOR Rapamycin-insensitive companion of mTOR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 1 1 6 2 1 1 1 1 1 1 48.254 47.132 3 0.00062426 52107 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.112 45.99 100060000 0 52426000 0 0 5743100 0 0 0 0 7382300 0 9812800 5924300 6674700 12094000 21595 2966 19722 181485;181486;181487;181488;181489;181490;181491;181492 144627;144628;144629;144630;144631;144632 144629 5 HIEHMESDELGLQK Oxidation (M) 1680.7777 0.77773456 463 O75150 RNF40 E3 ubiquitin-protein ligase BRE1B yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 28.961 29.393 3 3.7818E-13 31195 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 106.32 97.939 94985000 0 0 0 0 0 0 0 0 5476400 16217000 19641000 29824000 0 0 23828000 21596 463 19723 181493;181494;181495;181496;181497 144633;144634;144635;144636;144637;144638 144638 589 6 HIEHMESDELGLQK Unmodified 1664.7828 0.78281994 463 O75150 RNF40 E3 ubiquitin-protein ligase BRE1B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 40.708 41.06 3 0.0011855 45877 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 54.276 46.957 77040000 0 0 0 0 0 6101400 0 4162500 5111100 0 0 13500000 10814000 8953800 28397000 21597 463 19723 181498;181499;181500;181501;181502;181503;181504 144639;144640;144641 144639 3 HIEPELAGR Unmodified 1020.5352 0.53524309 2020 P86791;P86790 CCZ1;CCZ1B Vacuolar fusion protein CCZ1 homolog;Vacuolar fusion protein CCZ1 homolog B yes no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 28.259 28.574 2 0.014024 30850 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 58.917 40.932 21708000 0 0 0 0 0 3096100 3070300 0 0 4001500 0 4610900 0 0 6928700 21598 2020 19724 181505;181506;181507;181508;181509 144642;144643 144642 2 HIEVQVAQETR Unmodified 1308.6786 0.67861287 391 O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes yes 0 0 0 By MS/MS 2 0 1 1 36.323 32.939 2 0.019333 41610 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 69.954 42.211 1186100 0 0 1186100 0 0 0 0 0 0 0 0 0 0 0 0 21599 391 19725 181510 144644 144644 1 HIEVQVAQETRNVSTGSAENEEK Unmodified 2554.2259 0.22593679 391 O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes yes 0 0 1 By MS/MS 2 0 1 1 48.075 44.195 3 0.0029364 55611 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 36.523 28.336 4426600 0 0 4426600 0 0 0 0 0 0 0 0 0 0 0 0 21600 391 19726 181511 144645;144646 144645 2 HIFPASR Unmodified 826.44497 0.44497152 2403;5081 Q14320;Q9Y247 FAM50A;FAM50B Protein FAM50A;Protein FAM50B no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 22.791 23.009 2 0.035705 24631 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 70.716 40.296 115170000 0 0 0 10163000 0 0 0 0 8125800 29397000 21703000 0 23332000 22446000 0 21601 2403;5081 19727 181512;181513;181514;181515;181516;181517 144647;144648;144649 144649 3 HIFSEDTSDFSGMSETK Oxidation (M) 1932.8047 0.80473718 1383 P36952 SERPINB5 Serpin B5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.83 3.5 4 1 13 2 2 1 2 2 1 2 2 3 1 50.579 48.977 2;3 1.2698E-46 67023 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 135.61 131.51 867490000 95315000 212720000 335860000 0 0 0 37639000 25896000 17450000 26926000 42709000 46737000 26239000 0 0 21602 1383 19728 181518;181519;181520;181521;181522;181523;181524;181525;181526;181527;181528;181529;181530;181531;181532;181533;181534;181535 144650;144651;144652;144653;144654;144655;144656;144657;144658;144659;144660;144661;144662;144663 144656 2147 13 HIFSEDTSDFSGMSETK Unmodified 1916.8098 0.80982255 1383 P36952 SERPINB5 Serpin B5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 6.38 3.91 5 1 7 2 2 2 1 1 1 1 1 1 1 64.218 61.61 2;3 5.2326E-13 79868 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 143.94 136.81 431250000 96483000 105750000 151600000 1694900 0 9281200 0 6354800 2024500 0 10280000 0 0 5490900 42295000 21603 1383 19728 181536;181537;181538;181539;181540;181541;181542;181543;181544;181545;181546;181547;181548 144664;144665;144666;144667;144668;144669;144670;144671;144672;144673;144674;144675;144676;144677 144664 13 HIGLVYSGMGPDYR Unmodified 1563.7504 0.7503976 1194 P25787 PSMA2 Proteasome subunit alpha type-2 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 65.791 66.219 3 0.00031536 75014 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.83 63.653 14603000 0 0 0 0 0 0 0 0 0 0 2137400 0 0 0 12466000 21604 1194 19729 181549;181550 144678 144678 1 HIGPLLER Unmodified 933.5396 0.53960019 3204 Q86Y56 DNAAF5 Dynein assembly factor 5, axonemal yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 40.065 40.12 2 0.022888 44476 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 60.788 19.286 144920000 0 0 0 11756000 8966300 28808000 15352000 14163000 15203000 0 17409000 0 19422000 13841000 0 21605 3204 19730 181551;181552;181553;181554;181555;181556;181557;181558;181559 144679;144680;144681;144682 144680 4 HIGVLGTSK Unmodified 910.52362 0.52361577 1493 P46019 PHKA2 Phosphorylase b kinase regulatory subunit alpha, liver isoform yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 23.608 23.942 2 0.009287 25277 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 67.169 27.951 21937000 0 0 0 0 0 3012100 0 1711900 0 3182800 0 3656700 2650800 2530700 5191600 21606 1493 19731 181560;181561;181562;181563;181564;181565;181566 144683;144684;144685;144686 144684 4 HIGYDDSSK Unmodified 1020.4512 0.45123869 1297 P31153 MAT2A S-adenosylmethionine synthase isoform type-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.56 3.62 4 1 11 1 2 2 1 1 1 1 1 1 1 1 1 1 1 10.323 9.4761 2 5.5826E-16 12219 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 194.29 170.3 2075700000 200340000 1534700000 248820000 2815600 2537800 0 3256900 3227100 2343200 3791300 17521000 14719000 5015900 5481900 31065000 21607 1297 19732 181567;181568;181569;181570;181571;181572;181573;181574;181575;181576;181577;181578;181579;181580;181581;181582 144687;144688;144689;144690;144691;144692;144693;144694;144695;144696;144697;144698;144699;144700;144701;144702;144703;144704;144705 144689 18 HIHITQATETTTTR Unmodified 1608.822 0.82198264 2428 Q14677 CLINT1 Clathrin interactor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.64 1.67 1 21 1 1 1 2 2 1 2 2 2 1 2 2 3 26.8 26.717 2;3 1.0372E-40 28462 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 136.3 120.75 476400000 7038400 0 0 19549000 18707000 40714000 32012000 38929000 38354000 43086000 46763000 38075000 76130000 33917000 43122000 21608 2428 19733 181583;181584;181585;181586;181587;181588;181589;181590;181591;181592;181593;181594;181595;181596;181597;181598;181599;181600;181601;181602;181603;181604 144706;144707;144708;144709;144710;144711;144712;144713;144714;144715;144716;144717;144718;144719;144720;144721;144722;144723 144714 18 HIIDNFFVK Unmodified 1131.6077 0.60767976 261 O15164 TRIM24 Transcription intermediary factor 1-alpha yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 72.937 73.21 2 0.043215 83553 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.734 27.59 14812000 0 0 0 0 0 0 0 0 2923600 0 0 3984200 0 0 7904600 21609 261 19734 181605;181606;181607 144724 144724 1 HIIEDEIK Unmodified 995.52876 0.52876073 1181 P25054 APC Adenomatous polyposis coli protein yes yes 0 0 0 By MS/MS 2 0 1 1 35.733 32.348 2 0.01335 40824 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 97.798 49.294 7933200 0 0 7933200 0 0 0 0 0 0 0 0 0 0 0 0 21610 1181 19735 181608 144725 144725 1 HIIEDPCTLR Unmodified 1252.6234 0.62340617 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS 10 0 5 1 1 1 2 41.93 42.42 2 0.045604 46397 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.303 5.4626 16786000 0 0 0 0 0 1992500 0 0 0 1840100 0 4408500 0 0 8544700 21611 3119 19736 181609;181610;181611;181612;181613 144726 144726 1 HIIEDTEEARLNQK Unmodified 1694.8588 0.85876208 4049 Q99707 MTR Methionine synthase yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 39.92 34.835 3 6.1681E-15 48286 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 109 95.584 13997000 10085000 0 3911600 0 0 0 0 0 0 0 0 0 0 0 0 21612 4049 19737 181614;181615 144727 144727 1 HIISATSLSTSPTELGSR Unmodified 1855.964 0.96395543 2736 Q5JSZ5 PRRC2B Protein PRRC2B yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 63.103 63.282 3 0.0050669 71505 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 31.462 26.252 6595300 0 0 0 0 0 0 0 0 0 0 0 0 2645000 3950300 0 21613 2736 19738 181616;181617;181618;181619 144728;144729;144730 144730 3 HIISPNPHVR Unmodified 1168.6465 0.64652488 2828 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 2 1 1 1 24.841 25.079 3 0.018989 27272 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 32.209 15.295 106090000 0 0 0 0 18384000 8383900 0 4529800 3089000 0 10441000 0 0 9834800 51431000 21614 2828 19739 181620;181621;181622;181623;181624;181625;181626;181627;181628 144731;144732;144733;144734;144735 144731 5 HIITLGQVIHK Unmodified 1257.7557 0.75574098 3384 Q8NB16 MLKL Mixed lineage kinase domain-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 59.023 59.288 3 0.01385 66322 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.161 29.069 16091000 0 0 0 0 0 4211800 0 0 4383600 0 0 0 0 0 7495500 21615 3384 19740 181629;181630;181631 144736;144737 144737 2 HIIYVDNK Unmodified 1000.5342 0.53418046 403 O60488 ACSL4 Long-chain-fatty-acid--CoA ligase 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.06 3.8 5 1 10 2 2 2 1 1 1 1 1 1 1 1 1 1 28.453 26.731 2 0.0035989 33173 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 149.4 103.68 283170000 100050000 18334000 60575000 0 9550800 11859000 12123000 13163000 9556500 10948000 13453000 11495000 12059000 0 0 21616 403 19741 181632;181633;181634;181635;181636;181637;181638;181639;181640;181641;181642;181643;181644;181645;181646;181647 144738;144739;144740;144741;144742;144743;144744;144745;144746;144747;144748;144749;144750;144751;144752;144753;144754;144755 144753 13 HILAAEQK Unmodified 908.50797 0.50796571 160 O00471 EXOC5 Exocyst complex component 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 7.87 3.54 4 11 2 1 1 1 1 1 1 1 1 1 1 1 1 1 12.977 12.132 2 0.0013889 14926 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 166.78 104.07 249190000 151040000 28134000 38940000 1941500 1772100 2400900 2834200 2639400 1913400 3760900 2064400 0 3478200 3009900 5254400 21617 160 19742 181648;181649;181650;181651;181652;181653;181654;181655;181656;181657;181658;181659;181660;181661;181662 144756;144757;144758;144759;144760;144761;144762;144763;144764 144763 8 HILANFK Unmodified 841.48102 0.48102268 984 P13693;Q56UQ5 TPT1 Translationally-controlled tumor protein;TPT1-like protein yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 2 1 1 1 1 1 1 1 1 1 1 1 1 38.374 36.957 2 0.014308 50873 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.01 60.179 552070000 208410000 55457000 11431000 17401000 7912800 0 18860000 15476000 11272000 12343000 55992000 73866000 13101000 50551000 0 21618 984 19743 181663;181664;181665;181666;181667;181668;181669;181670;181671;181672;181673;181674;181675;181676 144765;144766;144767;144768;144769;144770;144771;144772;144773;144774;144775;144776;144777;144778;144779;144780;144781;144782 144769 16 HILEDSCAELGESK Unmodified 1586.7246 0.72463636 2890 Q6IQ49 SDE2 Protein SDE2 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 42.154 42.297 3 0.0003865 47493 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 49.298 42.821 44390000 0 0 0 0 5083000 3811300 4064000 0 4036700 7087200 0 0 10028000 0 10280000 21619 2890 19744 181677;181678;181679;181680;181681;181682;181683 144783;144784;144785;144786;144787 144783 5 HILESLDSEDGFIK Unmodified 1601.7937 0.7937022 2310 Q13535 ATR Serine/threonine-protein kinase ATR yes yes 0 0 0 By MS/MS 2 0 1 1 81.934 73.804 3 0.0071805 96750 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 30.176 25.261 5150100 5150100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21620 2310 19745 181684 144788 144788 1 HILETSK Unmodified 826.45487 0.45486751 4290 Q9C0E2 XPO4 Exportin-4 yes yes 0 0 0 By matching By MS/MS By MS/MS 2 0 3 1 1 1 12.918 9.7199 2 0.017603 11806 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 138.24 44.649 186920000 109270000 41014000 36633000 0 0 0 0 0 0 0 0 0 0 0 0 21621 4290 19746 181685;181686;181687 144789;144790 144790 2 HILILQNK Unmodified 977.6022 0.60220045 1427 P41091;Q2VIR3 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 43.965 42.77 2 0.0053401 47161 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 107.22 73.369 667290000 139510000 0 7153100 20793000 21489000 34012000 32464000 34348000 28425000 47959000 63229000 55726000 40425000 42536000 99228000 21622 1427 19747 181688;181689;181690;181691;181692;181693;181694;181695;181696;181697;181698;181699;181700;181701;181702 144791;144792;144793;144794;144795;144796;144797;144798;144799;144800;144801;144802;144803;144804 144793 10 HILINESK Unmodified 952.53418 0.53418046 5111 Q9Y2L5 TRAPPC8 Trafficking protein particle complex subunit 8 yes yes 0 0 0 By MS/MS 10 0 1 1 23.303 23.652 2 0.022888 24936 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 60.788 1.5826 2404600 0 0 0 0 0 0 0 0 0 0 0 0 2404600 0 0 21623 5111 19748 181703 144805 144805 1 HILTTELR Unmodified 981.56073 0.56072956 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 37.053 37.227 2 0.025168 39979 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 58.917 21.272 21725000 0 0 0 0 0 0 6666000 6041300 0 0 0 0 0 9017400 0 21624 5189 19749 181704;181705;181706 144806;144807;144808 144808 3 HILVSQGLIR Unmodified 1134.6873 0.68732706 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 By MS/MS 10 0 1 1 55.447 56.071 2 0.023214 62910 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.59 33.336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21625 2775 19750 181707 144809 144809 1 HILYNEQR Unmodified 1071.5461 0.54614213 1669;1450 P42229;P51692 STAT5A;STAT5B Signal transducer and activator of transcription 5A;Signal transducer and activator of transcription 5B no no 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 18.011 18.584 2 0.045385 18523 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.561 12.376 8165600 0 0 0 0 0 0 0 0 0 0 0 2264100 0 0 5901500 21626 1450;1669 19751 181708;181709 144810 144810 1 HIMGQNVADYMR Unmodified 1433.6544 0.65438873 1508 P46777 RPL5 60S ribosomal protein L5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 2 1 2 2 1 2 2 2 2 2 55.666 55.965 2;3 0.010935 63000 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 55.567 44.077 96052000 0 0 0 0 0 4558700 3133800 9485000 6064900 3845000 9886800 12788000 10301000 12684000 23304000 21627 1508 19752 181710;181711;181712;181713;181714;181715;181716;181717;181718;181719;181720;181721;181722;181723;181724;181725;181726;181727 144811;144812;144813 144813 3 HIMGQNVADYMR Oxidation (M) 1449.6493 0.64930335 1508 P46777 RPL5 60S ribosomal protein L5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 2 2 1 44.096 44.533 2;3 0.0020965 49200 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 50.207 40.92 77712000 0 0 0 0 0 0 0 0 0 15006000 0 36993000 0 25713000 0 21628 1508 19752 181728;181729;181730;181731;181732;181733 144814;144815;144816;144817;144818 144817 2381;2382 5 HIMGQNVADYMR 2 Oxidation (M) 1465.6442 0.64421797 1508 P46777 RPL5 60S ribosomal protein L5 yes yes 0 2 0 By matching By matching By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 26.898 27.098 2;3 0.0062204 28458 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 41.117 24.446 40954000 0 0 0 0 6208300 0 7026500 0 0 0 0 7624400 9091500 11003000 0 21629 1508 19752 181734;181735;181736;181737;181738 144819;144820 144820 2381;2382 1 HIMIDLGTGNNNK Unmodified 1425.7034 0.70344741 2007 P83876 TXNL4A Thioredoxin-like protein 4A yes yes 0 0 0 By MS/MS 2 0 1 1 63.059 54.79 3 0.0036556 74058 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.843 30.922 15854000 15854000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21630 2007 19753 181739 144821 144821 1 HIMIDLGTGNNNK Oxidation (M) 1441.6984 0.69836203 2007 P83876 TXNL4A Thioredoxin-like protein 4A yes yes 0 1 0 By MS/MS By MS/MS 2 0 3 2 1 53.001 46.967 2;3 0.0021044 65001 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.417 51.343 17234000 14402000 0 2831800 0 0 0 0 0 0 0 0 0 0 0 0 21631 2007 19753 181740;181741;181742 144822;144823;144824 144822 3257 2 HIMSEPEEITTMSGQK 2 Oxidation (M) 1848.8234 0.82336413 4963 Q9UKF6 CPSF3 Cleavage and polyadenylation specificity factor subunit 3 yes yes 0 2 0 By MS/MS 2.5 0.5 1 1 2 35.576 30.881 3 6.6327E-05 38313 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 88.561 79.279 29428000 0 29428000 0 0 0 0 0 0 0 0 0 0 0 0 0 21632 4963 19754 181743;181744 144825;144826;144827 144827 6306;6307 3 HIMSEPEEITTMSGQK Oxidation (M) 1832.8284 0.82844951 4963 Q9UKF6 CPSF3 Cleavage and polyadenylation specificity factor subunit 3 yes yes 0 1 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 47.326 42.54 3 0.00040288 56223 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.759 57.689 47362000 0 26959000 20402000 0 0 0 0 0 0 0 0 0 0 0 0 21633 4963 19754 181745;181746;181747 144828;144829;144830 144828 6306;6307 3 HIMSEPEEITTMSGQK Unmodified 1816.8335 0.83353488 4963 Q9UKF6 CPSF3 Cleavage and polyadenylation specificity factor subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS 6.8 3.92 2 3 1 1 1 1 1 57.017 55.151 3 1.5884E-17 72415 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.506 85.389 70808000 0 37873000 13323000 0 1331800 0 0 0 0 0 0 0 5893600 0 12387000 21634 4963 19754 181748;181749;181750;181751;181752 144831;144832;144833;144834;144835 144832 5 HINDSAPEVR Unmodified 1136.5574 0.5574351 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.036 19.232 2 0.00076823 19505 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 120.12 105.91 146780000 0 0 0 8789900 8089100 11896000 8009400 10389000 6502200 18176000 13122000 14783000 16134000 12629000 18259000 21635 2361 19755 181753;181754;181755;181756;181757;181758;181759;181760;181761;181762;181763;181764 144836;144837;144838;144839;144840;144841;144842;144843;144844;144845;144846;144847 144837 11 HINDWVAEK Unmodified 1110.5458 0.54580778 1623 P50452 SERPINB8 Serpin B8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 6 4 2 2 1 1 1 1 38.566 35.867 2 3.0938E-06 50489 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 168.83 109.85 48596000 28957000 0 4208400 9827100 0 5603200 0 0 0 0 0 0 0 0 0 21636 1623 19756 181765;181766;181767;181768 144848;144849;144850 144848 1 HINELSMK Oxidation (M) 986.48552 0.48551571 3485 Q8TC07 TBC1D15 TBC1 domain family member 15 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 4 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12.441 11.686 2 0.00044005 17494 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 162.25 74.498 406250000 93301000 62187000 182030000 4822700 3985100 5999800 6012100 6203900 4907500 9239300 3671800 7325500 5956400 5181100 5428300 21637 3485 19757 181769;181770;181771;181772;181773;181774;181775;181776;181777;181778;181779;181780;181781;181782;181783;181784 144851;144852;144853;144854;144855;144856;144857;144858;144859 144854 5007 9 HINELSMK Unmodified 970.4906 0.49060109 3485 Q8TC07 TBC1D15 TBC1 domain family member 15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.12 3.39 4 13 1 1 2 1 1 1 1 1 1 1 1 1 1 1 2 25.923 25.09 2 0.0024359 32612 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 124.98 72.3 441720000 196850000 64621000 89295000 8092400 6179200 0 6827600 9183400 5241000 6310200 7387800 8128400 6274100 5932500 21397000 21638 3485 19757 181785;181786;181787;181788;181789;181790;181791;181792;181793;181794;181795;181796;181797;181798;181799;181800;181801 144860;144861;144862;144863;144864;144865;144866;144867;144868;144869;144870;144871 144867 12 HINELTMK Unmodified 984.50625 0.50625115 4482 Q9HA65 TBC1D17 TBC1 domain family member 17 yes yes 0 0 0 By MS/MS 2 0 1 1 33.257 27.221 2 0.025738 37897 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.906 40.364 7555600 7555600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21639 4482 19758 181802 144872 144872 1 HINEVYYAK Unmodified 1135.5662 0.56620887 2334 Q13627;Q9Y463 DYRK1A;DYRK1B Dual specificity tyrosine-phosphorylation-regulated kinase 1A;Dual specificity tyrosine-phosphorylation-regulated kinase 1B yes no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By matching 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 27.951 27.162 2 0.0046691 35147 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 113.71 97.167 70279000 22470000 0 25072000 0 0 2509700 3627000 0 0 1594700 3250400 4825800 2267000 0 4662600 21640 2334 19759 181803;181804;181805;181806;181807;181808;181809;181810;181811 144873;144874;144875;144876;144877;144878 144878 6 HINMDGTINVDDFK Unmodified 1617.7457 0.74570615 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 5.43 3.96 4 3 1 2 1 1 1 1 74.88 72.043 2;3 3.3438E-18 92543 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 122.39 113.07 176800000 8160800 151540000 6153700 0 0 1999000 0 0 0 0 981710 0 0 0 7965800 21641 528 19760 181812;181813;181814;181815;181816;181817;181818 144879;144880;144881;144882;144883;144884 144883 5 HINMDGTINVDDFK Oxidation (M) 1633.7406 0.74062078 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 1 0 By MS/MS 3 0 1 1 63.113 58.348 3 0.0020317 71613 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 57.267 49.676 7463900 0 7463900 0 0 0 0 0 0 0 0 0 0 0 0 0 21642 528 19760 181819 144885 144885 683 1 HINPVAASLIQK Unmodified 1289.7456 0.74557022 1710 P53350 PLK1 Serine/threonine-protein kinase PLK1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 2 5 2 1 1 1 1 1 60.11 57.87 2;3 0.0017439 81154 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 108.43 57.628 63052000 29362000 0 0 0 0 7755800 6488200 5887000 0 0 7896600 0 0 5662500 0 21643 1710 19761 181820;181821;181822;181823;181824;181825;181826 144886;144887;144888;144889 144887 3 HINTWVAEK Unmodified 1096.5665 0.56654322 1344 P35237 SERPINB6 Serpin B6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.77 5 2 11 4 2 1 1 1 1 1 1 1 1 1 1 1 1 35.417 33.583 2 1.3798E-31 49960 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 208.25 139.33 2035600000 1421700000 252240000 128680000 0 5884900 10676000 0 9008700 7397500 12972000 27406000 34626000 10300000 18818000 95890000 21644 1344 19762 181827;181828;181829;181830;181831;181832;181833;181834;181835;181836;181837;181838;181839;181840;181841;181842;181843;181844 144890;144891;144892;144893;144894;144895;144896;144897;144898;144899;144900;144901;144902;144903;144904;144905;144906;144907;144908;144909;144910;144911;144912;144913;144914 144901 25 HIPGSPFTAK Unmodified 1053.5607 0.56072956 487 O75369 FLNB Filamin-B no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41.106 40.422 2 0.0095439 59006 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.221 63.79 322000000 191150000 0 28567000 6681500 4068800 9687400 6157300 4934400 3708000 8463000 9931900 11030000 7098900 9072000 21455000 21645 487 19763 181845;181846;181847;181848;181849;181850;181851;181852;181853;181854;181855;181856;181857;181858 144915;144916;144917;144918;144919;144920;144921 144917 7 HIQALAIR Unmodified 920.55558 0.55558461 1006 P14735 IDE Insulin-degrading enzyme yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 38.137 38.421 2 0.010595 43343 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 79.146 32.775 128520000 0 0 0 62830000 0 4654700 0 5605100 0 0 10462000 10994000 5234900 6989000 21755000 21646 1006 19764 181859;181860;181861;181862;181863;181864;181865;181866 144922;144923;144924;144925;144926;144927 144927 6 HIQDAPEEFISELAEYLIK Unmodified 2244.1314 0.13141469 596 O94874 UFL1 E3 UFM1-protein ligase 1 yes yes 0 0 0 By MS/MS 2 0 1 1 104.74 96.608 3 0.0013133 124086 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 44.089 37.653 2527000 2527000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21647 596 19765 181867 144928;144929 144929 2 HIQDLNWQRK Unmodified 1336.7 0.70001701 560 O75934 BCAS2 Pre-mRNA-splicing factor SPF27 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 34.585 34.729 3 0.00093069 36699 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.478 61.573 40752000 0 0 0 0 3326700 9757700 0 0 5746500 0 0 0 0 5735500 16186000 21648 560 19766 181868;181869;181870;181871;181872 144930 144930 1 HIQELSGDNIDQIK Unmodified 1608.8107 0.81074925 928 P10746 UROS Uroporphyrinogen-III synthase yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 56.857 52.004 3 0.0081871 64202 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 37.654 32.933 72743000 0 54422000 18321000 0 0 0 0 0 0 0 0 0 0 0 0 21649 928 19767 181873;181874;181875 144931;144932 144931 1 HIQGLEK Unmodified 823.4552 0.45520186 1433 P41214 EIF2D Eukaryotic translation initiation factor 2D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 15.616 12.263 2 0.013658 18543 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 122.13 35.262 155870000 67495000 32530000 55849000 0 0 0 0 0 0 0 0 0 0 0 0 21650 1433 19768 181876;181877;181878;181879 144933;144934;144935;144936;144937;144938 144937 6 HIQNMSEIK Oxidation (M) 1114.5441 0.54409322 3017 Q6ZUT9 DENND5B DENN domain-containing protein 5B yes yes 0 1 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 2 1 1 1 1 1 1 8.8003 8.9534 2 0.0046959 6294 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 73.248 30.125 16779000 0 0 0 0 909830 1840900 0 1976400 1473600 1575700 4041800 1427300 1851600 1682100 0 21651 3017 19769 181880;181881;181882;181883;181884;181885;181886;181887;181888;181889 144939;144940 144940 4621 2 HIQNMSEIK Unmodified 1098.5492 0.5491786 3017 Q6ZUT9 DENND5B DENN domain-containing protein 5B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 22.054 22.429 2 0.0032668 22900 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 93.143 48.532 31599000 0 0 0 0 0 0 0 0 0 7429400 0 11981000 6703600 5485300 0 21652 3017 19769 181890;181891;181892;181893;181894 144941;144942;144943;144944;144945 144945 5 HIQSNLDFSPVNSASSEENVK Unmodified 2301.0873 0.087318043 210 O14757 CHEK1 Serine/threonine-protein kinase Chk1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 1 1 6 1 1 1 1 1 1 1 1 64.183 62.591 3 1.6185E-20 70546 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.959 74.686 56599000 0 4669200 14442000 0 0 0 15190000 0 9064400 0 0 0 13234000 0 0 21653 210 19770 181895;181896;181897;181898;181899;181900;181901;181902 144946;144947;144948;144949;144950;144951;144952 144947 7 HIRLENNDNKPVTNSR Unmodified 1905.9769 0.97692015 3120;4251 Q7Z739;Q9BYJ9 YTHDF3;YTHDF1 YTH domain-containing family protein 3;YTH domain-containing family protein 1 no no 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 2 1 1 1 1 1 1 19.946 20.138 4 3.1832E-05 18250 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 97.836 92.407 301640000 0 0 0 15196000 3530000 16774000 34899000 14573000 35068000 18253000 23650000 26924000 24909000 26401000 61461000 21654 3120;4251 19771 181903;181904;181905;181906;181907;181908;181909;181910;181911;181912;181913;181914;181915 144953;144954;144955;144956;144957;144958;144959;144960 144955 1 HIRLENNENKPVTNSR Unmodified 1919.9926 0.99257022 5227 Q9Y5A9 YTHDF2 YTH domain-containing family protein 2 yes yes 0 0 2 By MS/MS By MS/MS 10 0 2 1 1 19.411 20.032 4 0.024398 20204 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 20.048 8.3567 23288000 0 0 0 0 0 0 0 0 0 0 0 9320800 0 0 13967000 21655 5227 19772 181916;181917 144961;144962 144962 1 HISDSVFLEAAK Unmodified 1315.6772 0.67721588 1154 P23368 ME2 NAD-dependent malic enzyme, mitochondrial yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 61.856 62.03 3 0.0024136 70645 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 59.418 45.409 9453600 0 0 0 0 0 2863900 0 0 0 0 6589800 0 0 0 0 21656 1154 19773 181918;181919 144963 144963 1 HISPAFQPPLPPTDGSTVVPAGPEPPPQSSR Unmodified 3159.5989 0.59891257 2861 Q68EM7 ARHGAP17 Rho GTPase-activating protein 17 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 81.436 81.55 3 3.1436E-11 94307 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 40.254 34.594 29809000 0 0 0 0 0 5412100 0 0 0 8156300 3059700 9103500 0 4077400 0 21657 2861 19774 181920;181921;181922;181923;181924 144964;144965;144966;144967 144965 3 HISPGDTK Unmodified 853.42938 0.42938104 1179 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 6.8156 3.7321 2 0.012704 5680 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 98.997 50.755 366210000 72877000 188520000 104820000 0 0 0 0 0 0 0 0 0 0 0 0 21658 1179 19775 181925;181926;181927;181928 144968;144969;144970;144971 144971 4 HISPTAPDTLGCYPFYK Unmodified 1965.9295 0.92948418 1556 P49005 POLD2 DNA polymerase delta subunit 2 yes yes 0 0 0 By MS/MS 10 0 1 1 75.502 75.813 3 0.025608 86912 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 27.43 16.815 8822700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8822700 21659 1556 19776 181929 144972 144972 1 HISQISVAEDDDESLLGHLMIVGK Oxidation (M) 2621.3007 0.30068164 1599 P49773 HINT1 Histidine triad nucleotide-binding protein 1 yes yes 0 1 0 By MS/MS By MS/MS 2.33 0.471 4 2 3 3 90.287 84.81 3;4 1.5189E-69 107491 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 139.26 131.9 566390000 466050000 100340000 0 0 0 0 0 0 0 0 0 0 0 0 0 21660 1599 19777 181930;181931;181932;181933;181934;181935 144973;144974;144975;144976;144977;144978 144977 2572 5 HISQISVAEDDDESLLGHLMIVGK Unmodified 2605.3058 0.30576701 1599 P49773 HINT1 Histidine triad nucleotide-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2.43 0.728 1 2 4 4 3 96.103 93.078 3;4 1.5676E-171 95599 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 189.84 176.91 345190000 308060000 37127000 0 0 0 0 0 0 0 0 0 0 0 0 0 21661 1599 19777 181936;181937;181938;181939;181940;181941;181942 144979;144980;144981;144982;144983;144984;144985;144986 144985 8 HISQLEQK Unmodified 981.52434 0.52434406 2928 Q6P2H3 CEP85 Centrosomal protein of 85 kDa yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 6 4 2 2 1 1 1 1 12.514 11.249 2 0.0068832 9303 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 92.439 35.71 45306000 0 7588100 31087000 0 0 0 0 0 0 0 0 0 2738600 0 3892200 21662 2928 19778 181943;181944;181945;181946 144987;144988;144989 144987 3 HISVLAETIK Unmodified 1109.6445 0.64445919 3094 Q7Z460 CLASP1 CLIP-associating protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 52.416 52.766 2 0.0079758 59851 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 61.161 24.766 44981000 0 0 0 0 0 5749500 0 0 3076800 5257200 6560000 7442100 9809400 0 7086000 21663 3094 19779 181947;181948;181949;181950;181951;181952;181953 144990;144991;144992;144993;144994 144990 5 HISVLAETIKK Unmodified 1237.7394 0.73942221 3094 Q7Z460 CLASP1 CLIP-associating protein 1 yes yes 0 0 1 By matching By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 42.763 43.243 3 0.00010587 47334 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.332 55.293 27321000 0 0 0 0 0 0 0 1919300 0 0 0 8705500 0 5648400 11047000 21664 3094 19780 181954;181955;181956;181957 144995;144996 144996 2 HITGSYK Unmodified 804.413 0.41300269 2485 Q15046 KARS Lysine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.12 0.331 7 1 3 3 2 8.1868 5.0492 2 0.011612 8757 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 143 57.698 4282100000 2530900000 645090000 1106100000 0 0 0 0 0 0 0 0 0 0 0 0 21665 2485 19781 181958;181959;181960;181961;181962;181963;181964;181965 144997;144998;144999;145000;145001;145002;145003 145000 7 HITIFSPEGR Unmodified 1155.6037 0.60365701 1819 P60900 PSMA6 Proteasome subunit alpha type-6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 2 1 1 2 2 1 2 2 51.629 51.889 2;3 0.0010686 57319 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.108 84.795 240550000 0 0 0 7488900 0 17201000 3527400 0 991540 0 31456000 32503000 7284500 28570000 111530000 21666 1819 19782 181966;181967;181968;181969;181970;181971;181972;181973;181974;181975;181976;181977;181978;181979 145004;145005;145006;145007;145008;145009;145010;145011;145012 145005 8 HITTISDETSEQVTR Unmodified 1715.8326 0.83260691 2128 Q06546 GABPA GA-binding protein alpha chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.593 37.697 3 8.2535E-29 40396 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 143.56 131.95 87393000 0 0 0 5597100 7003400 0 10705000 6752600 5523000 12230000 0 0 10157000 8215200 21209000 21667 2128 19783 181980;181981;181982;181983;181984;181985;181986;181987;181988;181989;181990;181991 145013;145014;145015;145016;145017;145018;145019;145020;145021;145022;145023;145024;145025;145026;145027;145028 145018 16 HITTLQASFLTK Unmodified 1358.7558 0.75580056 4984 Q9UL25 RAB21 Ras-related protein Rab-21 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 2 2 1 1 2 2 67.151 66.704 2;3 9.574E-06 75312 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 108.9 67.455 61028000 7019500 0 0 0 1821800 0 4842600 0 5128900 8546800 5640600 6088400 4839700 0 17100000 21668 4984 19784 181992;181993;181994;181995;181996;181997;181998;181999;182000;182001;182002;182003;182004 145029;145030;145031;145032;145033 145029 5 HIVELAVQK Unmodified 1035.6077 0.60767975 409 O60518 RANBP6 Ran-binding protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.24 2 1 10 1 1 1 1 1 1 1 1 1 1 1 1 1 16.661 16.069 2 0.007262 57437 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.429 50.305 86850000 18244000 0 0 6293100 7296200 1569400 9696700 5075400 1498800 0 11235000 0 8085800 7804200 10051000 21669 409 19785 182005;182006;182007;182008;182009;182010;182011;182012;182013;182014;182015;182016;182017 145034;145035;145036;145037;145038;145039 145036 4 HIVENAVQK Unmodified 1036.5665 0.56654322 149 O00410 IPO5 Importin-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.92 3.93 11 2 12 5 3 5 1 1 1 1 1 1 1 1 1 1 1 1 15.467 13.787 1;2 3.0535E-39 12128 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 190.51 146.74 4961100000 1290300000 1124400000 1696400000 31347000 30759000 100330000 41688000 36870000 29511000 118090000 80091000 94951000 68423000 71461000 146430000 21670 149 19786 182018;182019;182020;182021;182022;182023;182024;182025;182026;182027;182028;182029;182030;182031;182032;182033;182034;182035;182036;182037;182038;182039;182040;182041;182042 145040;145041;145042;145043;145044;145045;145046;145047;145048;145049;145050;145051;145052;145053;145054;145055;145056;145057;145058;145059;145060;145061;145062;145063;145064;145065;145066;145067;145068;145069;145070;145071 145067 30 HIVGEIK Unmodified 794.46504 0.46503826 4969 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19.289 18.887 2 0.036349 24602 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 83.614 10.575 746030000 672560000 0 29051000 2181800 3209900 2391500 3387600 2049300 2901100 3656900 3042400 4130900 3696800 3358300 10414000 21671 4969 19787 182043;182044;182045;182046;182047;182048;182049;182050;182051;182052;182053;182054;182055;182056 145072;145073 145072 2 HIVSNDSSDSDDESHEPK Unmodified 1996.8246 0.82462099 1522 P47712 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 11.727 11.008 3 2.5184E-33 9473 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 123.19 122.7 135800000 21625000 15481000 10321000 3761900 3554400 7968300 4280200 6208500 4519700 7613600 5789300 15589000 8283400 8515100 12291000 21672 1522 19788 182057;182058;182059;182060;182061;182062;182063;182064;182065;182066;182067;182068;182069;182070;182071;182072 145074;145075;145076;145077;145078;145079;145080;145081;145082;145083;145084;145085;145086;145087;145088;145089 145089 16 HIWITAAK Unmodified 938.53379 0.53378653 601 O94906 PRPF6 Pre-mRNA-processing factor 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 40.567 40.792 2 0.020713 43716 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.573 27.467 87778000 0 0 0 0 3022300 8699300 5784000 0 4216100 7327100 0 25908000 7491900 8728700 16600000 21673 601 19789 182073;182074;182075;182076;182077;182078;182079;182080;182081 145090;145091 145090 2 HIYYITGETK Unmodified 1223.6186 0.61863837 850 P07900;Q58FG0 HSP90AA1;HSP90AA5P Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.14 3.85 1 34 5 25 18 6 16 2 2 2 2 2 2 2 3 2 2 2 2 43.442 41.338 2;3 4.6533E-38 58383 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 226.47 185.02 13299000000 7614100000 1096800000 370420000 155830000 93572000 428590000 230410000 180380000 156840000 368440000 576190000 411070000 350160000 357530000 908260000 21674 850 19790 182082;182083;182084;182085;182086;182087;182088;182089;182090;182091;182092;182093;182094;182095;182096;182097;182098;182099;182100;182101;182102;182103;182104;182105;182106;182107;182108;182109;182110;182111;182112;182113;182114;182115;182116;182117;182118;182119;182120;182121;182122;182123;182124;182125;182126;182127;182128;182129;182130;182131;182132;182133;182134;182135;182136;182137;182138;182139;182140;182141;182142;182143;182144;182145;182146 145092;145093;145094;145095;145096;145097;145098;145099;145100;145101;145102;145103;145104;145105;145106;145107;145108;145109;145110;145111;145112;145113;145114;145115;145116;145117;145118;145119;145120;145121;145122;145123;145124;145125;145126;145127;145128;145129;145130;145131;145132;145133;145134;145135;145136;145137;145138;145139;145140;145141;145142;145143;145144;145145;145146;145147;145148;145149;145150;145151;145152;145153;145154;145155;145156;145157;145158;145159;145160;145161;145162;145163;145164;145165;145166;145167;145168;145169;145170;145171;145172;145173;145174;145175;145176;145177 145132 79 HKPGSTPEPIAAEVR Unmodified 1587.8369 0.83690442 1636 P50748 KNTC1 Kinetochore-associated protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 2 1 1 1 1 1 33.372 33.61 3 0.0039581 37032 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 41.695 28.576 91795000 0 0 0 3729100 0 7593400 4335300 0 4055900 12394000 9767100 19385000 7053100 7176700 16305000 21675 1636 19791 182147;182148;182149;182150;182151;182152;182153;182154;182155;182156;182157 145178;145179;145180;145181;145182;145183;145184;145185 145178 8 HKPGSTPEPIAAEVRSPSMESK Oxidation (M) 2350.1587 0.15870885 1636 P50748 KNTC1 Kinetochore-associated protein 1 yes yes 0 1 2 By MS/MS 2 0 1 1 44.157 37.292 4 0.00019554 51199 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.272 52.637 92508000 92508000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21676 1636 19792 182158 145186 145186 2626 1 HKPGSTPEPIAAEVRSPSMESK Unmodified 2334.1638 0.16379422 1636 P50748 KNTC1 Kinetochore-associated protein 1 yes yes 0 0 2 By MS/MS 2 0 1 1 53.931 45.868 3 0.020587 63009 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 41.521 37.57 10160000 10160000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21677 1636 19792 182159 145187 145187 1 HLAAALENLNK Unmodified 1192.6564 0.65642086 2183 Q12768 KIAA0196 WASH complex subunit strumpellin yes yes 0 0 0 By MS/MS 2 0 1 1 59.324 51.098 2 0.007861 69304 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.716 51.807 28302000 28302000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21678 2183 19793 182160 145188 145188 1 HLAAVEER Unmodified 923.48248 0.48247924 3687;3475 Q8TAQ2;Q92922 SMARCC2;SMARCC1 SWI/SNF complex subunit SMARCC2;SWI/SNF complex subunit SMARCC1 no no 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.248 13.403 2 0.02755 12588 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 57.281 0 114650000 0 0 0 6247400 7361000 9417600 7655400 5698700 5662600 11986000 9729900 10767000 11490000 10111000 18526000 21679 3475;3687 19794 182161;182162;182163;182164;182165;182166;182167;182168;182169;182170;182171;182172 145189;145190 145189 2 HLAEEYGER Unmodified 1102.5043 0.5043369 2734 Q5JSH3 WDR44 WD repeat-containing protein 44 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.43 2.06 1 13 1 1 1 1 1 1 1 1 1 1 1 1 2 16.31 16.312 2 0.00269 14896 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 137.9 109.73 85447000 0 0 9006900 2363600 1888100 2355500 2667600 2535900 1674600 3380700 8245800 13116000 4592800 10865000 22754000 21680 2734 19795 182173;182174;182175;182176;182177;182178;182179;182180;182181;182182;182183;182184;182185;182186 145191;145192;145193;145194;145195;145196;145197;145198;145199;145200;145201;145202;145203;145204;145205 145193 15 HLAEEYGERAINK Unmodified 1528.7634 0.76340513 2734 Q5JSH3 WDR44 WD repeat-containing protein 44 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 36.973 32.033 3 3.4309E-18 42605 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.65 61.993 261680000 212210000 32472000 17003000 0 0 0 0 0 0 0 0 0 0 0 0 21681 2734 19796 182187;182188;182189 145206;145207;145208;145209 145206 4 HLAEHSPYYEAMK Unmodified 1574.7188 0.71876312 2210 Q12931 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 35.785 36.16 3 0.00054252 40245 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 67.252 56.307 43742000 0 0 0 0 0 6208500 0 0 3132900 0 0 6686400 6587500 7550100 13576000 21682 2210 19797 182190;182191;182192;182193;182194;182195 145210;145211;145212;145213;145214 145213 5 HLAELNHQK Unmodified 1088.5727 0.57269123 844 P07602 PSAP Prosaposin;Saposin-A;Saposin-B-Val;Saposin-B;Saposin-C;Saposin-D yes yes 0 0 0 By MS/MS 2 0 1 1 14.356 10.307 2 0.041671 15552 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.601 55.332 10553000 10553000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21683 844 19798 182196 145215 145215 0 HLAESESLLTSPPK Unmodified 1507.7882 0.7882229 2424 Q14669 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes yes 0 0 0 By MS/MS 2 0 1 1 57.052 53.199 3 0.0015174 66538 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 66.989 66.989 7299800 0 0 7299800 0 0 0 0 0 0 0 0 0 0 0 0 21684 2424 19799 182197 145216 145216 0 HLAEVLER Unmodified 965.52943 0.52942943 2816 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 34.286 34.416 2 0.01039 37252 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 79.809 40.267 109910000 0 0 0 0 4978600 10189000 12526000 12016000 10314000 9661600 14810000 0 18917000 16497000 0 21685 2816 19800 182198;182199;182200;182201;182202;182203;182204;182205;182206 145217;145218 145218 2 HLAGEVAK Unmodified 823.4552 0.45520186 2252 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.8801 8.0064 2 0.0050366 5777 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 114.78 40.368 260740000 0 0 0 14399000 13392000 14432000 5365900 8386200 6073300 33822000 73524000 48630000 9006700 8474200 25239000 21686 2252 19801 182207;182208;182209;182210;182211;182212;182213;182214;182215;182216;182217;182218 145219;145220;145221;145222;145223;145224;145225;145226;145227;145228;145229 145223 5 HLAGLGLTEAIDK Unmodified 1336.7351 0.73506511 1624 P50454 SERPINH1 Serpin H1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.73 9 6 23 7 6 2 2 2 2 2 2 2 3 2 2 2 2 70.414 68.481 2;3 1.3276E-41 90803 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 222.74 189.37 2832000000 1793500000 629460000 157670000 0 7065700 16797000 10190000 12193000 13317000 16105000 27389000 28204000 15013000 21557000 83561000 21687 1624 19802 182219;182220;182221;182222;182223;182224;182225;182226;182227;182228;182229;182230;182231;182232;182233;182234;182235;182236;182237;182238;182239;182240;182241;182242;182243;182244;182245;182246;182247;182248;182249;182250;182251;182252;182253;182254;182255;182256 145230;145231;145232;145233;145234;145235;145236;145237;145238;145239;145240;145241;145242;145243;145244;145245;145246;145247;145248;145249;145250;145251;145252;145253;145254;145255;145256;145257;145258;145259;145260;145261;145262 145251 25 HLAILSK Unmodified 780.48577 0.48577371 185 O14530 TXNDC9 Thioredoxin domain-containing protein 9 yes yes 0 0 0 By MS/MS 10 0 1 1 31.673 32.382 2 0.023725 34328 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.244 41.243 11704000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11704000 21688 185 19803 182257 145263 145263 1 HLALNLQEK Unmodified 1064.5978 0.59784335 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 56.934 57.148 2 0.040422 64949 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 44.395 1.7962 28898000 0 0 0 0 0 9917300 0 0 0 0 9738400 0 0 9241800 0 21689 2431 19804 182258;182259;182260 145264;145265;145266 145264 3 HLAVLNFPK Unmodified 1037.6022 0.60220045 379 O43913 ORC5 Origin recognition complex subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.601 66.685 2 0.0038891 75185 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 97.033 72.139 76378000 0 0 0 2712300 1901500 7644300 2705600 4481300 4558800 6988900 5661400 12214000 5461800 6662600 15386000 21690 379 19805 182261;182262;182263;182264;182265;182266;182267;182268;182269;182270;182271;182272 145267;145268;145269;145270;145271;145272;145273;145274;145275 145270 8 HLAVMPHPER Unmodified 1185.6077 0.60769653 248 O15067 PFAS Phosphoribosylformylglycinamidine synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 29.555 30.048 3 0.0022235 30985 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.282 69.309 63222000 0 0 0 0 0 0 0 0 0 0 12134000 0 0 11485000 39604000 21691 248 19806 182273;182274;182275 145276;145277;145278 145276 3 HLCEPGADGAETFADGVPR Unmodified 1997.8901 0.89013856 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.07 62.169 3 7.2089E-07 70850 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.713 73.219 92605000 0 0 0 7926500 4312000 5681400 4889400 5557100 4203400 7248700 9689100 7436100 9668600 7704200 18289000 21692 2451 19807 182276;182277;182278;182279;182280;182281;182282;182283;182284;182285;182286;182287 145279;145280;145281;145282;145283;145284;145285;145286;145287;145288;145289;145290 145288 11 HLCISGTPK Unmodified 1011.5172 0.51715019 4584 Q9NR09 BIRC6 Baculoviral IAP repeat-containing protein 6 yes yes 0 0 0 By MS/MS 2 0 1 1 28.588 25.482 2 0.0074558 32289 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 96.367 56.824 26018000 0 0 26018000 0 0 0 0 0 0 0 0 0 0 0 0 21693 4584 19808 182288 145291 145291 1 HLCQQLQAEQAAAEK Unmodified 1723.8312 0.83116712 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.24 3.75 5 1 11 2 2 2 1 1 1 1 1 1 1 1 1 1 1 37.616 36.125 2;3 8.7104E-58 49676 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 186.17 180.13 140250000 34612000 5368700 42720000 4247800 5806200 4575800 5964700 6207200 3778200 5638600 3234300 0 5889900 7873100 4331600 21694 2459 19809 182289;182290;182291;182292;182293;182294;182295;182296;182297;182298;182299;182300;182301;182302;182303;182304;182305 145292;145293;145294;145295;145296;145297;145298;145299;145300;145301;145302 145296 10 HLDALLK Unmodified 808.48069 0.48068833 3563 Q8WVM7 STAG1 Cohesin subunit SA-1 yes yes 0 0 0 By MS/MS 2 0 1 1 48.038 40.323 2 0.031783 56157 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.029 20.994 14285000 14285000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21695 3563 19810 182306 145303 145303 1 HLDEGQDLRK Unmodified 1209.6102 0.61019895 5396 yes yes 0 0 1 By MS/MS By MS/MS 6 4 1 1 1 1 20.594 19.182 3 0.029371 20265 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 32.008 2.6677 + 48305000 0 0 39691000 0 0 0 8614000 0 0 0 0 0 0 0 0 21696 5396 19811 182307;182308 145304;145305 145304 2 HLDGEEDGSSDQSQASGTTGGR Unmodified 2189.9057 0.90572486 5031 Q9UNF1 MAGED2 Melanoma-associated antigen D2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 13.233 13.38 3 3.971E-93 12586 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 163.11 162.76 384140000 0 0 0 26711000 28612000 45160000 36371000 30965000 20423000 35703000 52277000 1518500 48209000 0 58194000 21697 5031 19812 182309;182310;182311;182312;182313;182314;182315;182316;182317;182318;182319 145306;145307;145308;145309 145306 4 HLDGEEDGSSDQSQASGTTGGRR Unmodified 2346.0068 0.0068358901 5031 Q9UNF1 MAGED2 Melanoma-associated antigen D2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.69 1.54 1 25 1 3 2 2 2 2 2 3 1 1 2 2 3 10.934 10.961 3;4 8.3446E-30 10091 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 105.79 102.29 616690000 0 0 3085600 58184000 30992000 60924000 46227000 37979000 26208000 64901000 40938000 35653000 64858000 51697000 95044000 21698 5031 19813 182320;182321;182322;182323;182324;182325;182326;182327;182328;182329;182330;182331;182332;182333;182334;182335;182336;182337;182338;182339;182340;182341;182342;182343;182344;182345 145310;145311;145312;145313;145314;145315;145316;145317;145318;145319;145320;145321;145322;145323;145324;145325;145326;145327;145328;145329;145330 145326 17 HLDGEEDGSSDQSQASGTTGGRRVSK Unmodified 2660.2022 0.20224123 5031 Q9UNF1 MAGED2 Melanoma-associated antigen D2 yes yes 0 0 2 By MS/MS 2 0 1 1 16.497 12.288 4 0.013867 17919 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 23.44 22.457 12689000 12689000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21699 5031 19814 182346 145331 145331 1 HLDGRQIVVK Unmodified 1163.6775 0.67749065 440 O60884 DNAJA2 DnaJ homolog subfamily A member 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 34.355 28.859 3 0.0020873 39931 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.05 54.509 51685000 39301000 12384000 0 0 0 0 0 0 0 0 0 0 0 0 0 21700 440 19815 182347;182348 145332;145333;145334 145332 3 HLDLASLK Unmodified 895.51272 0.51271674 3398 Q8NBN7 RDH13 Retinol dehydrogenase 13 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 49.051 49.163 2 0.040078 55459 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 80.438 5.1275 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21701 3398 19816 182349;182350 145335;145336 145336 2 HLDLSNVAGYK Unmodified 1215.6248 0.62478638 5030 Q9UNF0 PACSIN2 Protein kinase C and casein kinase substrate in neurons protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.56 3.98 5 4 2 1 2 1 1 1 1 58.805 55.441 2;3 1.5946E-19 72729 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 185.33 145.33 551630000 247790000 183630000 87732000 9304600 0 0 4797600 7507100 0 0 0 0 0 10871000 0 21702 5030 19817 182351;182352;182353;182354;182355;182356;182357;182358;182359 145337;145338;145339;145340;145341;145342;145343;145344;145345;145346 145338 8 HLDPIRENLGK Unmodified 1290.7044 0.70443369 2313 Q13546 RIPK1 Receptor-interacting serine/threonine-protein kinase 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 36.236 36.694 3 0.002338 39014 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.247 38.067 117470000 0 0 0 0 0 19476000 0 0 0 0 0 25066000 32564000 0 40368000 21703 2313 19818 182360;182361;182362;182363 145347;145348;145349 145348 3 HLDQIIPR Unmodified 990.56106 0.56106391 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.945 44.119 2 0.0044861 49687 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 132.08 74.803 326860000 0 0 0 19151000 13332000 29044000 22288000 26689000 20596000 29731000 22647000 43005000 40296000 24929000 35155000 21704 3641 19819 182364;182365;182366;182367;182368;182369;182370;182371;182372;182373;182374;182375 145350;145351;145352;145353;145354;145355;145356;145357;145358;145359;145360;145361;145362;145363;145364;145365;145366;145367 145351 18 HLDSSSNERPDISSIQR Unmodified 1939.9348 0.93478057 1609 P49902 NT5C2 Cytosolic purine 5'-nucleotidase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 1 1 1 1 2 2 1 2 2 1 2 38.215 38.467 3;4 3.8234E-05 42187 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.209 49.928 123490000 0 0 0 5423700 4083300 7297300 5191800 5977600 8878700 11611000 5797700 17920000 13103000 6166600 32037000 21705 1609 19820 182376;182377;182378;182379;182380;182381;182382;182383;182384;182385;182386;182387;182388;182389;182390;182391;182392 145368;145369;145370;145371;145372;145373;145374;145375;145376;145377;145378;145379;145380;145381 145379 13 HLDSVLSDHTR Unmodified 1278.6317 0.63166267 2652 Q2M389 KIAA1033 WASH complex subunit 7 yes yes 0 0 0 By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 29.722 29.979 3 0.011862 30850 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.418 53.719 105600000 0 0 0 0 0 11675000 7625800 9129100 5415900 8436000 9404600 0 18431000 12035000 23449000 21706 2652 19821 182393;182394;182395;182396;182397;182398;182399;182400;182401 145382;145383 145382 1 HLDTFLK Unmodified 872.4756 0.47560295 1661 P51580 TPMT Thiopurine S-methyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 5 2 2 1 50.008 43.778 2 0.0088573 58126 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 146.21 70.895 675360000 252060000 340540000 82757000 0 0 0 0 0 0 0 0 0 0 0 0 21707 1661 19822 182402;182403;182404;182405;182406 145384;145385;145386;145387;145388 145384 5 HLEAADK Unmodified 782.39227 0.39226725 2456 Q14966 ZNF638 Zinc finger protein 638 yes yes 0 0 0 By MS/MS 2 0 1 1 0.17684 -3.0789 2 0.030768 23 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.9 64.78 8671800 0 8671800 0 0 0 0 0 0 0 0 0 0 0 0 0 21708 2456 19823 182407 145389 145389 1 HLEAQGTSLPK Unmodified 1179.6248 0.62478638 2901 Q6NW34 C3orf17 Uncharacterized protein C3orf17 yes yes 0 0 0 By MS/MS 2 0 1 1 31.667 28.432 2 0.015958 35921 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 80.688 47.848 3640100 0 0 3640100 0 0 0 0 0 0 0 0 0 0 0 0 21709 2901 19824 182408 145390 145390 0 HLEDTLK Unmodified 854.44978 0.44978213 3242 Q8IWJ2 GCC2 GRIP and coiled-coil domain-containing protein 2 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 16.17 16.542 2 0.02468 15581 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.305 18.999 12317000 0 0 0 0 0 0 0 0 1832700 0 1876000 2577000 1522100 2299200 2209600 21710 3242 19825 182409;182410;182411;182412;182413;182414 145391 145391 1 HLEEEEGQLK Unmodified 1210.583 0.58298115 843 P07476 IVL Involucrin yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 20.064 20.003 2 8.8415E-32 20561 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 179.51 94.941 26266000 0 0 0 20278000 895920 0 1856500 3235000 0 0 0 0 0 0 0 21711 843 19826 182415;182416;182417;182418 145392;145393;145394 145394 3 HLEELDK Unmodified 882.4447 0.44469675 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 15.763 15.114 2 0.022665 13691 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 104.37 44.725 111570000 0 23972000 0 10183000 7531500 6878000 12634000 0 7295900 10104000 17829000 0 0 15139000 0 21712 5262 19827 182419;182420;182421;182422;182423;182424;182425;182426;182427;182428 145395;145396;145397 145397 3 HLEEQEGQLK Unmodified 1209.599 0.59896556 843 P07476 IVL Involucrin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 16.375 16.326 2 0.0027001 15991 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 91.584 29.384 23511000 0 0 0 16657000 925680 0 2212500 3715500 0 0 0 0 0 0 0 21713 843 19828 182429;182430;182431;182432 145398;145399 145399 2 HLEEQIAK Unmodified 966.51345 0.51344502 214 O14777 NDC80 Kinetochore protein NDC80 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.71 3.61 4 10 1 2 1 1 1 1 1 1 1 1 1 1 1 17.187 16.265 2 0.0058845 14420 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 105.14 46.321 129120000 5177900 19236000 39496000 0 2807200 6797500 6116200 0 3085500 5568900 6176500 9897200 3996500 8469000 12298000 21714 214 19829 182433;182434;182435;182436;182437;182438;182439;182440;182441;182442;182443;182444;182445;182446 145400;145401;145402;145403;145404;145405;145406;145407;145408;145409;145410 145408 11 HLEEVLEMK Oxidation (M) 1142.5642 0.56415996 3217 Q8IUD2 ERC1 ELKS/Rab6-interacting/CAST family member 1 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 40.483 36.874 2 0.0005802 47124 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 121.62 104.23 14700000 0 0 14700000 0 0 0 0 0 0 0 0 0 0 0 0 21715 3217 19830 182447;182448 145411;145412;145413 145413 4835 3 HLEEVLEMK Unmodified 1126.5692 0.56924534 3217 Q8IUD2 ERC1 ELKS/Rab6-interacting/CAST family member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 57.024 53.237 2 0.0034781 57597 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 106.93 82.003 15384000 7530700 0 0 0 0 0 0 0 0 0 0 0 0 0 7853500 21716 3217 19830 182449;182450;182451 145414;145415;145416 145414 3 HLEFMNQLK Unmodified 1158.5856 0.5855641 2143 Q07866 KLC1 Kinesin light chain 1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 58.526 58.834 2 0.0035145 66108 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 105.57 82.828 19770000 0 0 0 0 0 3453600 0 0 1847500 0 0 2931900 3887400 0 7649400 21717 2143 19831 182452;182453;182454;182455;182456;182457 145417;145418;145419;145420 145417 4 HLEFMNQLK Oxidation (M) 1174.5805 0.58047873 2143 Q07866 KLC1 Kinesin light chain 1 yes yes 0 1 0 By MS/MS 10 0 1 1 40.422 41.176 2 0.008374 45422 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.895 45.233 7567600 0 0 0 0 0 0 0 0 0 0 0 7567600 0 0 0 21718 2143 19831 182458 145421 145421 3449 1 HLEFSSLRR Unmodified 1143.6149 0.6148904 2171 Q09472 EP300 Histone acetyltransferase p300 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 37.688 38.15 3 0.0016845 40962 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.897 25.299 28671000 0 0 0 0 0 4674600 0 0 0 0 0 6537200 3611900 0 13848000 21719 2171 19832 182459;182460;182461;182462 145422 145422 1 HLEGLSEEAIMELNLPTGIPIVYELDK Oxidation (M) 3038.5522 0.55220488 1077 P18669 PGAM1 Phosphoglycerate mutase 1 yes yes 0 1 0 By MS/MS By MS/MS 2.33 0.471 4 2 3 3 99.765 94.338 3;4 1.7196E-104 117901 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 144.48 142.1 2856300000 2310100000 546260000 0 0 0 0 0 0 0 0 0 0 0 0 0 21720 1077 19833 182463;182464;182465;182466;182467;182468 145423;145424;145425;145426;145427;145428 145423 1552 5 HLEGLSEEAIMELNLPTGIPIVYELDK Unmodified 3022.5573 0.55729025 1077 P18669 PGAM1 Phosphoglycerate mutase 1 yes yes 0 0 0 By MS/MS By MS/MS 2.27 0.617 1 6 4 7 4 101.03 96.433 3;4 1.3644E-55 95271 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 113.93 108.21 3494900000 3097000000 397900000 0 0 0 0 0 0 0 0 0 0 0 0 0 21721 1077 19833 182469;182470;182471;182472;182473;182474;182475;182476;182477;182478;182479 145429;145430;145431;145432;145433;145434;145435;145436;145437;145438 145434 8 HLEHAPSPSDVSNAPEVK Unmodified 1912.9279 0.92790427 5193 Q9Y4C1 KDM3A Lysine-specific demethylase 3A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 40.343 40.184 3 5.2809E-08 44841 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 82.865 77.155 156560000 0 0 7475300 10855000 13105000 10784000 11385000 12997000 9504700 15157000 13540000 16484000 17095000 0 18177000 21722 5193 19834 182480;182481;182482;182483;182484;182485;182486;182487;182488;182489;182490;182491 145439;145440;145441;145442;145443;145444;145445;145446;145447;145448;145449;145450;145451;145452;145453;145454 145441 15 HLEHPEQQDGQLK Unmodified 1557.7536 0.75356872 843 P07476 IVL Involucrin yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 15.693 15.743 3 5.5349E-10 15762 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 117.03 89.263 35694000 0 0 0 29136000 0 0 0 0 0 0 0 0 6557300 0 0 21723 843 19835 182492;182493 145455;145456 145456 2 HLEINPDHPIVETLR Unmodified 1781.9424 0.94243213 862 P08238 HSP90AB1 Heat shock protein HSP 90-beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.89 3.51 1 9 2 33 6 4 2 1 4 2 3 3 3 4 4 3 2 4 70.618 70.429 2;3;4 2.2998E-44 77506 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 147.33 133.9 1706400000 42106000 59745000 723520 6589200 0 163770000 11851000 32365000 69000000 40687000 55186000 80645000 48850000 51209000 1043600000 21724 862 19836 182494;182495;182496;182497;182498;182499;182500;182501;182502;182503;182504;182505;182506;182507;182508;182509;182510;182511;182512;182513;182514;182515;182516;182517;182518;182519;182520;182521;182522;182523;182524;182525;182526;182527;182528;182529;182530;182531;182532;182533;182534;182535;182536;182537;182538 145457;145458;145459;145460;145461;145462;145463;145464;145465;145466;145467;145468;145469;145470;145471;145472;145473;145474;145475;145476;145477;145478;145479;145480;145481;145482;145483;145484;145485;145486;145487;145488;145489;145490;145491;145492;145493;145494;145495;145496;145497;145498;145499;145500;145501;145502;145503;145504;145505;145506;145507 145482 48 HLEINPDHPIVETLRQK Unmodified 2038.096 0.095972656 862 P08238 HSP90AB1 Heat shock protein HSP 90-beta yes yes 0 0 1 By MS/MS 3 0 2 2 69.947 65.314 3;4 0.0002785 79573 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 69.594 65.844 24390000 0 24390000 0 0 0 0 0 0 0 0 0 0 0 0 0 21725 862 19837 182539;182540 145508;145509 145508 2 HLEINPDHSIIETLR Unmodified 1785.9373 0.93734675 850 P07900 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS 8.92 2.53 2 11 1 1 2 1 2 2 1 1 2 75.56 75.116 2;3 2.0645E-23 84970 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 122.75 118.35 122000000 593410 7381700 0 0 0 5759200 0 2819900 7682200 5741500 1971500 2313500 0 0 87740000 21726 850 19838 182541;182542;182543;182544;182545;182546;182547;182548;182549;182550;182551;182552;182553 145510;145511;145512;145513;145514;145515 145512 5 HLEINPDHSIIETLRQK Unmodified 2042.0909 0.090887278 850 P07900 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 0 0 1 By MS/MS 3 0 1 1 76.824 73.346 4 0.0019219 88161 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 56.872 53.336 3506000 0 3506000 0 0 0 0 0 0 0 0 0 0 0 0 0 21727 850 19839 182554 145516 145516 1 HLENQIAK Unmodified 951.51378 0.51377937 3509 Q8TDY2 RB1CC1 RB1-inducible coiled-coil protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 12.743 11.972 2 0.016803 16111 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.516 30.834 66656000 5409500 20412000 24026000 1377500 0 1770900 2053400 0 0 2442900 1269200 0 2288000 1804000 3802300 21728 3509 19840 182555;182556;182557;182558;182559;182560;182561;182562;182563;182564;182565 145517;145518;145519 145517 3 HLEQQAEK Unmodified 981.48796 0.48795855 2994 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 5.7367 2.4359 2 2.1858E-78 3793 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 236.21 88.877 184740000 0 184740000 0 0 0 0 0 0 0 0 0 0 0 0 0 21729 2994 19841 182566;182567 145520 145520 1 HLEQQEGQLK Unmodified 1208.6149 0.61494998 843 P07476 IVL Involucrin yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 13.59 13.68 2 2.9876E-11 13175 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 161.17 77.91 62516000 0 0 0 41318000 2119000 0 4091800 7297600 0 0 2654600 0 5034900 0 0 21730 843 19842 182568;182569;182570;182571;182572;182573 145521;145522;145523;145524;145525;145526;145527 145526 7 HLEQQEGQPK Unmodified 1192.5836 0.58364985 843 P07476 IVL Involucrin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 6.4784 6.501 2 3.1507E-23 4208 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 173.37 159.79 12303000 0 0 0 9349200 0 0 1188400 1765400 0 0 0 0 0 0 0 21731 843 19843 182574;182575;182576 145528;145529;145530 145530 3 HLEQQQGQLEVPEQQVGQPK Unmodified 2299.1557 0.15567238 843 P07476 IVL Involucrin yes yes 0 0 0 By MS/MS 10 0 1 1 50.043 49.424 3 0.0044713 56419 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 31.767 23.545 25552000 0 0 0 25552000 0 0 0 0 0 0 0 0 0 0 0 21732 843 19844 182577 145531 145531 1 HLEQRDEPQEPSNK Unmodified 1705.802 0.80197548 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 25 2 2 2 2 2 2 2 2 2 3 2 2 11.055 11.193 3;4 7.2223E-27 10062 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 155.43 136.15 403720000 0 0 0 29347000 13078000 34429000 22366000 17400000 20985000 27692000 30070000 53616000 43510000 41157000 70071000 21733 965 19845 182578;182579;182580;182581;182582;182583;182584;182585;182586;182587;182588;182589;182590;182591;182592;182593;182594;182595;182596;182597;182598;182599;182600;182601;182602 145532;145533;145534;145535;145536;145537;145538;145539;145540;145541;145542;145543;145544;145545;145546;145547;145548;145549 145538 16 HLEQRDEPQEPSNKVPEQQR Unmodified 2443.184 0.18401239 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 22.935 23.211 4 3.3933E-05 23415 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.482 45.526 63999000 0 0 0 0 3962900 0 4025200 6078200 0 6121000 3464900 16296000 8861000 6569500 8620500 21734 965 19846 182603;182604;182605;182606;182607;182608;182609;182610;182611 145550;145551;145552;145553;145554;145555;145556;145557;145558 145553 9 HLEVISGQK Unmodified 1009.5556 0.55564418 3489 Q8TCG1 KIAA1524 Protein CIP2A yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.622 22.828 2 0.0031624 23742 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 92.491 57.242 61998000 0 0 0 3277100 2224800 5916000 3906400 2947800 2861300 6917700 6323600 6635600 5160000 7306800 8521300 21735 3489 19847 182612;182613;182614;182615;182616;182617;182618;182619;182620;182621;182622;182623 145559;145560;145561;145562;145563;145564;145565;145566;145567 145565 7 HLEVLNVSENK Unmodified 1280.6725 0.67246486 2582 Q15813 TBCE Tubulin-specific chaperone E yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 2 1 1 44.529 44.903 2 0.00015309 48971 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 108.93 79.767 30472000 0 0 0 0 0 0 0 0 0 7172200 0 0 4005600 6551700 12743000 21736 2582 19848 182624;182625;182626;182627;182628;182629;182630;182631 145568;145569;145570;145571;145572;145573;145574;145575 145572 8 HLEVSSASMAEDLCRK Unmodified 1831.8557 0.85566731 2689 Q4V328 GRIPAP1 GRIP1-associated protein 1 yes yes 0 0 1 By MS/MS By MS/MS By matching 2 0 3 1 1 1 61.573 55.581 3 0.00026814 74632 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.632 68.213 28345000 17714000 7531800 3099500 0 0 0 0 0 0 0 0 0 0 0 0 21737 2689 19849 182632;182633;182634 145576;145577 145577 2 HLFAILGGSEGK Unmodified 1227.6612 0.66117189 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS 10 0 5 1 1 1 1 1 69.544 69.773 3 0.019485 79002 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.954 23.6 19515000 0 0 0 0 0 4881100 0 0 0 0 0 3726600 1399000 2883900 6624000 21738 3641 19850 182635;182636;182637;182638;182639 145578;145579 145579 2 HLFETDVQNNK Unmodified 1343.647 0.64697839 2772 Q5T2T1 MPP7 MAGUK p55 subfamily member 7 yes yes 0 0 0 By MS/MS 2 0 1 1 37.662 34.23 3 0.026903 43146 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 39.873 33.725 2075500 0 0 2075500 0 0 0 0 0 0 0 0 0 0 0 0 21739 2772 19851 182640 145580 145580 0 HLFGQPNSAYDFK Unmodified 1522.7205 0.72047768 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 2 1 1 2 2 1 2 2 2 2 60.862 61.113 2;3 0.0019183 70184 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 79.148 50.19 121620000 0 0 0 0 0 15223000 3704300 7270100 5497700 9765200 7874100 15527000 11817000 14532000 30408000 21740 643 19852 182641;182642;182643;182644;182645;182646;182647;182648;182649;182650;182651;182652;182653;182654;182655;182656;182657 145581;145582;145583;145584;145585;145586;145587;145588;145589;145590;145591 145589 8 HLFLTSK Unmodified 844.48069 0.48068833 4636 Q9NTK5 OLA1 Obg-like ATPase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 37.098 35.575 2 0.021489 52578 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 167.25 92.656 283790000 181470000 37667000 0 5749700 3733200 22005000 7991900 0 0 0 13928000 0 0 11248000 0 21741 4636 19853 182658;182659;182660;182661;182662;182663;182664;182665 145592;145593;145594;145595 145594 4 HLFPQHSAPGR Unmodified 1245.6367 0.63668847 3158 Q86UW9 DTX2 Probable E3 ubiquitin-protein ligase DTX2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 25.939 26.056 3 0.0001796 28144 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 78.653 62.021 194990000 0 0 0 13399000 14400000 49765000 7917400 9519600 15122000 18742000 22999000 43131000 0 0 0 21742 3158 19854 182666;182667;182668;182669;182670;182671;182672;182673;182674 145596;145597;145598;145599;145600;145601;145602;145603 145596 4 HLFTGPVLSK Unmodified 1097.6233 0.62332982 1042 P16930 FAH Fumarylacetoacetase yes yes 0 0 0 By MS/MS 2 0 1 1 67.978 59.683 2 0.0031586 79738 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.431 51.005 17201000 17201000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21743 1042 19855 182675 145604 145604 1 HLFTPADK Unmodified 927.48142 0.48141661 5110 Q9Y2L1 DIS3 Exosome complex exonuclease RRP44 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 25.523 25.639 2 0.025413 27297 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 58.716 31.596 45624000 0 0 0 0 0 18065000 0 10474000 6241300 10843000 0 0 0 0 0 21744 5110 19856 182676;182677;182678;182679 145605;145606 145606 2 HLGGHEGTIPSK Unmodified 1231.6309 0.63093439 1593 Q86TX2;P49753 ACOT1;ACOT2 Acyl-coenzyme A thioesterase 1;Acyl-coenzyme A thioesterase 2, mitochondrial yes no 0 0 0 By MS/MS By matching 2 0 2 1 1 19.927 16.217 3 0.042206 24064 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 32.159 16.53 10991000 9131200 0 1859500 0 0 0 0 0 0 0 0 0 0 0 0 21745 1593 19857 182680;182681 145607 145607 0 HLGGHEGTIPSKV Unmodified 1330.6993 0.69934831 1593 Q86TX2;P49753 ACOT1;ACOT2 Acyl-coenzyme A thioesterase 1;Acyl-coenzyme A thioesterase 2, mitochondrial yes no 0 0 1 By MS/MS 2 0 1 1 39.523 32.9 3 0.0050747 45699 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 39.581 32.687 43481000 43481000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21746 1593 19858 182682 145608 145608 0 HLGGSQQLLHNK Unmodified 1330.7106 0.7105817 781 P04279 SEMG1 Semenogelin-1;Alpha-inhibin-92;Alpha-inhibin-31;Seminal basic protein yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 22.491 22.489 3 0.0005176 23915 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 80.834 59.826 15637000 0 0 0 9887600 0 0 0 5749800 0 0 0 0 0 0 0 21747 781 19859 182683;182684 145609;145610 145610 1 HLGRAELGMGDSTSQSPPIK Oxidation (M) 2096.0321 0.03205177 4586 Q9NR19 ACSS2 Acetyl-coenzyme A synthetase, cytoplasmic yes yes 0 1 1 By MS/MS 2 0 2 2 48.271 40.556 3;4 1.0768E-07 56202 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.11 58.638 18789000 18789000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21748 4586 19860 182685;182686 145611;145612 145612 5987 2 HLGRPSESSAR Unmodified 1195.6058 0.60578227 457 O75128 COBL Protein cordon-bleu yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 7.0051 7.1485 3 0.00086648 5271 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 73.781 38.24 140480000 0 0 0 0 8677200 9155300 8089400 12192000 10155000 0 23816000 14501000 17286000 16007000 20599000 21749 457 19861 182687;182688;182689;182690;182691;182692;182693;182694;182695;182696 145613;145614;145615;145616;145617;145618;145619;145620 145617 8 HLGTAGTDVDLR Unmodified 1253.6364 0.6364137 5260 Q9Y613 FHOD1 FH1/FH2 domain-containing protein 1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 37.258 37.48 2 0.014478 40386 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 43.512 25.072 25624000 0 0 0 0 1912400 3359100 0 2801100 2637500 2715900 0 4352700 0 2862700 4982800 21750 5260 19862 182697;182698;182699;182700;182701;182702;182703;182704 145621;145622;145623;145624 145622 4 HLGTEDIISTK Unmodified 1212.635 0.63501672 4770 Q9NZJ4 SACS Sacsin yes yes 0 0 0 By MS/MS 2 0 1 1 46.514 42.662 2 0.0043491 53832 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 80.688 62.464 3816600 0 0 3816600 0 0 0 0 0 0 0 0 0 0 0 0 21751 4770 19863 182705 145625 145625 1 HLGYKPEEYK Unmodified 1262.6295 0.62953741 121 O00159 MYO1C Unconventional myosin-Ic yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 24.101 24.261 3 0.0018293 25920 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 80.787 66.553 74040000 0 0 0 0 3456900 20191000 0 9643100 8674100 7933800 0 0 9373400 0 14767000 21752 121 19864 182706;182707;182708;182709;182710;182711;182712 145626;145627;145628;145629 145627 4 HLIEQDFPGMR Unmodified 1341.65 0.64995528 4403 Q9H4M9 EHD1 EH domain-containing protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 61.728 61.726 2 0.011696 70626 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 48.283 22.724 2585200 0 0 0 0 0 2585200 0 0 0 0 0 0 0 0 0 21753 4403 19865 182713 145630 145630 1 HLIGQVMIDK Oxidation (M) 1168.6274 0.62742892 2664 Q32P41 TRMT5 tRNA (guanine(37)-N1)-methyltransferase yes yes 0 1 0 By MS/MS 2 0 1 1 55.152 47.043 2 0.018612 64467 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.816 35.934 5711900 5711900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21754 2664 19866 182714 145631 145631 4334 1 HLIGQVMIDK Unmodified 1152.6325 0.6325143 2664 Q32P41 TRMT5 tRNA (guanine(37)-N1)-methyltransferase yes yes 0 0 0 By MS/MS 2 0 1 1 65.143 56.855 2 0.015333 76350 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.557 47.11 5342600 5342600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21755 2664 19866 182715 145632 145632 1 HLILPEK Unmodified 848.51199 0.51198846 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.937 35.117 2 0.021005 38812 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 107.43 10.358 508880000 0 0 0 23277000 21690000 39492000 28189000 36398000 22210000 46015000 44248000 52034000 57551000 58905000 78872000 21756 528 19867 182716;182717;182718;182719;182720;182721;182722;182723;182724;182725;182726;182727 145633;145634;145635;145636;145637;145638;145639;145640;145641;145642;145643;145644;145645 145633 12 HLIPAANTGESK Unmodified 1236.6463 0.64625011 1882 P62258 YWHAE 14-3-3 protein epsilon yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.08 3.8 31 6 22 17 8 12 2 2 1 2 2 2 1 2 2 2 2 2 30.188 27.631 2;3 3.0936E-31 37453 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 191.05 137.89 19686000000 9338200000 4558700000 3823800000 86613000 57119000 67952000 78697000 72655000 50024000 71399000 268580000 188570000 112640000 242990000 667780000 21757 1882 19868 182728;182729;182730;182731;182732;182733;182734;182735;182736;182737;182738;182739;182740;182741;182742;182743;182744;182745;182746;182747;182748;182749;182750;182751;182752;182753;182754;182755;182756;182757;182758;182759;182760;182761;182762;182763;182764;182765;182766;182767;182768;182769;182770;182771;182772;182773;182774;182775;182776;182777;182778;182779;182780;182781;182782;182783;182784;182785;182786 145646;145647;145648;145649;145650;145651;145652;145653;145654;145655;145656;145657;145658;145659;145660;145661;145662;145663;145664;145665;145666;145667;145668;145669;145670;145671;145672;145673;145674;145675;145676;145677;145678;145679;145680;145681;145682;145683;145684;145685;145686;145687;145688;145689;145690;145691;145692;145693;145694;145695;145696;145697;145698;145699;145700;145701;145702;145703;145704;145705;145706;145707;145708;145709;145710;145711;145712;145713;145714;145715;145716;145717;145718;145719;145720;145721;145722;145723;145724;145725;145726;145727;145728;145729;145730;145731 145658 75 HLIPMNPNDDSLFK Oxidation (M) 1655.7977 0.79774172 2421 Q14651 PLS1 Plastin-1 yes yes 0 1 0 By MS/MS 2 0 2 2 76.796 68.665 2;3 0.0075975 90635 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.606 33.426 26945000 26945000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21758 2421 19869 182787;182788 145732;145733 145733 3972 1 HLIPQESR Unmodified 978.52468 0.52467841 2989 Q6W2J9 BCOR BCL-6 corepressor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 20.249 20.612 2 0.010456 21478 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 79.597 44.789 29087000 0 0 0 0 0 0 0 0 3940800 0 0 0 11058000 0 14088000 21759 2989 19870 182789;182790;182791;182792 145734;145735;145736;145737;145738 145736 5 HLIPTSHPIR Unmodified 1169.6669 0.66692597 142 O00311 CDC7 Cell division cycle 7-related protein kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 32.268 32.588 3 0.043303 35691 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 35.178 20.027 19505000 0 0 0 0 0 0 0 5373000 0 0 4767500 0 6142000 3222300 0 21760 142 19871 182793;182794;182795;182796 145739 145739 1 HLISSLQNHNHQLK Unmodified 1667.8856 0.88558595 2816;463 Q5VTR2;O75150 RNF20;RNF40 E3 ubiquitin-protein ligase BRE1A;E3 ubiquitin-protein ligase BRE1B no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 2 34.435 34.741 3;4 3.2467E-19 38175 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 105.17 76.843 378910000 0 0 0 0 0 123400000 8763200 24560000 112780000 7287700 24129000 0 39853000 22816000 15322000 21761 2816;463 19872 182797;182798;182799;182800;182801;182802;182803;182804;182805;182806 145740;145741;145742;145743;145744 145740 5 HLITTQTEHK Unmodified 1206.6357 0.63568542 5271 Q9Y697 NFS1 Cysteine desulfurase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 14.227 11.03 3 0.00092979 16591 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.044 86.511 80426000 71635000 0 8791300 0 0 0 0 0 0 0 0 0 0 0 0 21762 5271 19873 182807;182808 145745;145746;145747;145748;145749 145746 5 HLIVLINK Unmodified 948.61204 0.61203685 1014 P15170;Q8IYD1 GSPT1;GSPT2 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A;Eukaryotic peptide chain release factor GTP-binding subunit ERF3B yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.47 2 1 14 1 1 1 2 1 1 2 1 1 1 1 2 56.027 55.597 2 0.0035872 81297 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 119.22 54.418 251880000 9541500 0 0 7089700 3867500 45080000 8280900 8320800 15815000 29080000 25209000 0 23486000 17309000 58803000 21763 1014 19874 182809;182810;182811;182812;182813;182814;182815;182816;182817;182818;182819;182820;182821;182822;182823 145750;145751;145752;145753;145754;145755;145756;145757;145758;145759 145754 9 HLLDDNGQDK Unmodified 1153.5364 0.53636531 1113 P20810 CAST Calpastatin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.43 2.06 1 13 1 1 1 1 1 1 1 1 1 1 1 1 2 14.46 14.462 2 2.051E-146 13149 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 285.74 218.57 317200000 0 0 2885500 14530000 11847000 14761000 13602000 12495000 13805000 21070000 42678000 40485000 22736000 30507000 75801000 21764 1113 19875 182824;182825;182826;182827;182828;182829;182830;182831;182832;182833;182834;182835;182836;182837 145760;145761;145762;145763;145764;145765;145766;145767;145768;145769;145770;145771 145763 11 HLLDDNGQDKPVKPPTK Unmodified 1901.0007 0.0006752871 1113 P20810 CAST Calpastatin yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 32.256 32.473 4 0.00093007 33823 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.734 37.784 116460000 0 0 0 7450500 4205300 0 8951600 9664500 0 0 13278000 24620000 9108300 10082000 29103000 21765 1113 19876 182838;182839;182840;182841;182842;182843;182844;182845;182846 145772;145773;145774;145775;145776 145774 3 HLLEGAK Unmodified 766.43374 0.43373813 4094 Q9BQE5 APOL2 Apolipoprotein L2 yes yes 0 0 0 By MS/MS By MS/MS By matching 7.33 3.77 1 2 1 1 1 11.835 11.293 2 0.021122 14893 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 110.63 47.919 77134000 0 0 52187000 0 0 0 0 0 0 0 0 12949000 0 0 11999000 21766 4094 19877 182847;182848;182849 145777;145778;145779;145780 145779 4 HLLEGLLQK Unmodified 1049.6233 0.62332982 117 O00141 SGK1 Serine/threonine-protein kinase Sgk1 yes yes 0 0 0 By MS/MS 10 0 1 1 65.272 65.824 2 0.037292 74816 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.335 15.762 4559600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4559600 21767 117 19878 182850 145781 145781 1 HLLEGQNASVLAYGPTGAGK Unmodified 1982.0221 0.022139011 2449 Q14807 KIF22 Kinesin-like protein KIF22 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 66.765 66.757 3 0.0020405 75771 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 29.729 25.608 16475000 0 0 0 0 1860200 0 4209300 0 0 0 0 0 3843400 6562600 0 21768 2449 19879 182851;182852;182853;182854 145782;145783 145783 2 HLLELNK Unmodified 865.50215 0.50215205 4385 Q9H3R5 CENPH Centromere protein H yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 44.09 38.083 2 0.023246 52073 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 105.27 4.9961 132860000 21666000 111200000 0 0 0 0 0 0 0 0 0 0 0 0 0 21769 4385 19880 182855;182856 145784 145784 1 HLLETSTLPIK Unmodified 1250.7234 0.72343779 2973 Q6ULP2 AFTPH Aftiphilin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 72.666 66.881 2 0.0026769 87911 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 102.07 83.628 52766000 30547000 15349000 6870200 0 0 0 0 0 0 0 0 0 0 0 0 21770 2973 19881 182857;182858;182859 145785;145786;145787 145786 2 HLLGAEHGDEPR Unmodified 1329.6426 0.64256171 4174 Q9BV38 WDR18 WD repeat-containing protein 18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 20.301 20.5 3 2.4585E-05 20007 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 82.85 78.804 130630000 0 0 0 0 0 23905000 6570200 12957000 13065000 13643000 12149000 0 21775000 26571000 0 21771 4174 19882 182860;182861;182862;182863;182864;182865;182866;182867 145788;145789;145790;145791;145792;145793;145794 145793 7 HLLGVEDLLQK Unmodified 1263.7187 0.71868677 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.67 2.87 3 2 1 2 2 1 1 83.222 79.541 2;3 1.1766E-05 100586 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.45 96.097 96163000 25319000 59408000 1350100 0 0 0 0 0 0 0 0 0 0 0 10087000 21772 2047 19883 182868;182869;182870;182871;182872;182873 145795;145796;145797;145798;145799 145795 5 HLLLVDPEGVVR Unmodified 1345.7718 0.77178497 1245 P29353 SHC1 SHC-transforming protein 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 2 1 1 1 2 1 1 1 1 2 76.55 76.697 2;3 1.5413E-05 87899 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.397 75.326 69496000 0 0 0 0 0 8372000 3447400 4487500 3669000 8384100 6826500 7461300 3706900 4197700 18944000 21773 1245 19884 182874;182875;182876;182877;182878;182879;182880;182881;182882;182883;182884;182885;182886 145800;145801;145802;145803;145804;145805;145806;145807;145808;145809;145810 145803 10 HLLNQAVGEEEVPK Unmodified 1561.81 0.81002097 4327 Q9H0G5 NSRP1 Nuclear speckle splicing regulatory protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 48.832 49.463 3 0.00028053 54839 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.754 46.863 49927000 0 0 0 0 0 0 0 0 0 0 14925000 15475000 0 0 19526000 21774 4327 19885 182887;182888;182889 145811;145812;145813 145812 3 HLLNSPTDPFNR Unmodified 1409.7052 0.70516197 623 O95155 UBE4B Ubiquitin conjugation factor E4 B yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 59.77 60.036 3 0.0033754 67653 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.96 30.16 12726000 0 0 0 0 0 4901800 0 0 0 0 0 0 0 2483000 5341500 21775 623 19886 182890;182891;182892 145814 145814 1 HLLPVETQR Unmodified 1091.6087 0.60874239 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 39.106 39.521 2 0.0053645 44176 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 77.923 42.567 174840000 0 0 0 0 0 26805000 0 0 0 26168000 24737000 29798000 23190000 0 44147000 21776 2392 19887 182893;182894;182895;182896;182897;182898 145815;145816;145817;145818 145815 4 HLLPVTTADLSSK Unmodified 1380.7613 0.76127986 3902 Q96K37 SLC35E1 Solute carrier family 35 member E1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 71.834 65.929 2 0.016227 87598 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.385 25.937 13782000 12185000 0 1597400 0 0 0 0 0 0 0 0 0 0 0 0 21777 3902 19888 182899;182900 145819 145819 1 HLLQEAR Unmodified 865.477 0.47699993 242 O15027 SEC16A Protein transport protein Sec16A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 14.938 15.065 2 0.023528 14389 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 92.47 37.013 91642000 0 0 0 6415900 7718500 0 10926000 8860900 7073700 12022000 13406000 0 11784000 13436000 0 21778 242 19889 182901;182902;182903;182904;182905;182906;182907;182908;182909 145820;145821;145822;145823;145824;145825 145820 6 HLLQPPPRPAQPTSGK Unmodified 1722.9529 0.95293723 4662 Q9NV88 INTS9 Integrator complex subunit 9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 37.03 37.132 3 0.0052439 41130 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 38.376 32.213 8980800 0 0 0 0 0 3940600 0 2423200 2616900 0 0 0 0 0 0 21779 4662 19890 182910;182911;182912 145826 145826 1 HLLSAGDGEVK Unmodified 1124.5826 0.58258722 3177 Q86W42 THOC6 THO complex subunit 6 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 2 1 1 1 1 1 1 1 1 1 1 1 27.625 27.862 2 0.0012176 29875 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 74.267 45.322 82150000 0 0 0 0 3790000 7771300 5439000 6979600 4347600 7652100 8258100 11306000 7807800 9533600 9265000 21780 3177 19891 182913;182914;182915;182916;182917;182918;182919;182920;182921;182922;182923;182924;182925 145827;145828;145829;145830;145831;145832;145833;145834;145835;145836 145832 10 HLLSLMGIPYLDAPSEAEASCAALVK Unmodified 2755.3925 0.39247353 1405 P39748 FEN1 Flap endonuclease 1 yes yes 0 0 0 By MS/MS 3 0 1 1 97.524 94.216 3 0.0030203 112967 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 30.36 23.711 2331900 0 2331900 0 0 0 0 0 0 0 0 0 0 0 0 0 21781 1405 19892 182926 145837 145837 1 HLLTLADVK Unmodified 1008.5968 0.59678072 2838 Q63HN8 RNF213 E3 ubiquitin-protein ligase RNF213 yes yes 0 0 0 By MS/MS 2 0 1 1 71.565 63.299 2 0.0084942 84306 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 128.38 51.906 33533000 33533000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21782 2838 19893 182927 145838 145838 0 HLLTVDQK Unmodified 952.53418 0.53418046 2829 Q5VYS8 ZCCHC6 Terminal uridylyltransferase 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 23.805 24.006 2 0.013529 25131 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 72.138 12.933 10315000 0 0 0 2387800 0 0 0 1677400 0 2060100 0 0 0 0 4190000 21783 2829 19894 182928;182929;182930;182931;182932 145839;145840;145841;145842;145843 145839 5 HLLVHAPEDK Unmodified 1157.6193 0.61930707 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.61 2.99 4 1 23 2 2 1 1 2 4 3 3 4 1 1 2 1 1 28.742 27.948 2;3 0.0005866 29306 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 113.62 90.981 2828100000 264830000 77729000 16424000 2144700 123650000 283030000 313870000 551920000 677530000 115870000 169460000 186980000 0 12360000 32342000 21784 1714 19895 182933;182934;182935;182936;182937;182938;182939;182940;182941;182942;182943;182944;182945;182946;182947;182948;182949;182950;182951;182952;182953;182954;182955;182956;182957;182958;182959;182960 145844;145845;145846;145847;145848;145849;145850;145851;145852;145853;145854;145855;145856;145857;145858;145859;145860;145861;145862;145863;145864;145865;145866 145847 19 HLLVHAPEDKK Unmodified 1285.7143 0.71427009 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 2 2 2 1 1 1 2 1 1 21.399 21.567 2;3 3.6271E-05 21952 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 110.31 85.456 1144500000 0 0 0 25461000 17562000 116430000 202910000 227810000 219660000 37633000 65776000 213730000 6311000 11203000 0 21785 1714 19896 182961;182962;182963;182964;182965;182966;182967;182968;182969;182970;182971;182972;182973;182974;182975 145867;145868;145869;145870;145871;145872;145873;145874;145875;145876;145877;145878;145879;145880;145881;145882;145883;145884;145885;145886;145887 145874 18 HLLVSNVGGDGEEIER Unmodified 1722.8537 0.8536767 533 O75694 NUP155 Nuclear pore complex protein Nup155 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 1 2 2 2 1 1 1 1 1 1 2 54.118 54.281 2;3 3.7531E-10 61558 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 91.855 85.622 187560000 0 0 0 8963100 10808000 19655000 19021000 19723000 10058000 14758000 11666000 19236000 13003000 13201000 27470000 21786 533 19897 182976;182977;182978;182979;182980;182981;182982;182983;182984;182985;182986;182987;182988;182989;182990;182991 145888;145889;145890;145891;145892;145893;145894;145895;145896;145897;145898;145899;145900;145901;145902;145903 145889 14 HLMLPDFDLLEDIESK Oxidation (M) 1929.9394 0.93938016 974 P13010 XRCC5 X-ray repair cross-complementing protein 5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 98.156 93.728 3 0.00013216 116911 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.391 74.84 72693000 54483000 16887000 1323300 0 0 0 0 0 0 0 0 0 0 0 0 21787 974 19898 182992;182993;182994;182995;182996 145904;145905;145906;145907;145908 145907 1296 5 HLMLPDFDLLEDIESK Unmodified 1913.9445 0.94446554 974 P13010 XRCC5 X-ray repair cross-complementing protein 5 yes yes 0 0 0 By MS/MS 2 0 1 1 99.632 91.502 3 1.0586E-38 117926 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 105.46 88.179 21434000 21434000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21788 974 19898 182997 145909 145909 1 HLNDDVVK Unmodified 938.48214 0.48214489 2090 Q03135 CAV1 Caveolin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 16.046 15.691 2 0.0043564 15212 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 111.95 54.388 141040000 0 36691000 15427000 6266500 6351000 0 6830900 5340000 5282400 0 11724000 11605000 12008000 11116000 12403000 21789 2090 19899 182998;182999;183000;183001;183002;183003;183004;183005;183006;183007;183008;183009;183010 145910;145911;145912;145913;145914;145915;145916;145917;145918;145919;145920;145921;145922 145919 13 HLNDETTSK Unmodified 1043.4884 0.48835248 4654 Q9NUQ9 FAM49B Protein FAM49B yes yes 0 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 1 3 5.6137 2.2858 2 6.041E-16 4305 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 193.82 132.86 2239900000 181390000 2058500000 0 0 0 0 0 0 0 0 0 0 0 0 0 21790 4654 19900 183011;183012;183013;183014 145923;145924;145925;145926;145927;145928 145923 6 HLNEEELGQLQTQASDTSVVLSMDNNR Oxidation (M) 3043.4153 0.41527048 100 CON__Q7RTT2;CON__Q8N1N4-2;Q8N1N4 KRT78 Keratin, type II cytoskeletal 78 yes no 0 1 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 76.647 76.81 3 3.5756E-18 88729 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 60.419 54.817 + 19136000 0 0 0 0 0 0 0 5849500 0 9368500 0 3917600 0 0 0 21791 100 19901 183015;183016;183017 145929;145930 145929 133 2 HLNEIDLFHCIDPNDSK Unmodified 2065.9527 0.95273882 2506 Q15185 PTGES3 Prostaglandin E synthase 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.46 0.634 1 5 7 5 7 1 86.252 82.658 3;4 9.0273E-47 99657 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 137.61 132.22 934870000 495100000 429900000 9872600 0 0 0 0 0 0 0 0 0 0 0 0 21792 2506 19902 183018;183019;183020;183021;183022;183023;183024;183025;183026;183027;183028;183029;183030 145931;145932;145933;145934;145935;145936;145937;145938;145939;145940;145941;145942 145931 11 HLNLGMNR Unmodified 953.48652 0.48651876 2530 Q15404 RSU1 Ras suppressor protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 30.34 30.678 2 0.018028 31705 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.776 3.7708 19891000 0 0 0 0 0 4256800 0 0 0 0 0 0 0 4004500 11630000 21793 2530 19903 183031;183032;183033 145943;145944 145944 2 HLNLGMNR Oxidation (M) 969.48143 0.48143338 2530 Q15404 RSU1 Ras suppressor protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 16.601 16.676 2 0.02544 16373 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 50.966 11.423 16944000 0 0 0 1612200 985450 3027100 2677400 1698600 1359700 2803200 2780300 0 0 0 0 21794 2530 19903 183034;183035;183036;183037;183038;183039;183040;183041 145945;145946;145947 145945 3 HLNPDTELK Unmodified 1065.5455 0.54547343 4089 Q9BQ70 TCF25 Transcription factor 25 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.342 24.544 2 7.1807E-06 24855 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 155.84 82.596 259900000 0 0 0 21365000 17306000 25564000 19991000 19254000 17118000 23994000 20108000 25514000 22689000 17206000 29795000 21795 4089 19904 183042;183043;183044;183045;183046;183047;183048;183049;183050;183051;183052;183053 145948;145949;145950;145951;145952;145953;145954;145955;145956;145957;145958;145959;145960;145961;145962;145963 145961 16 HLNSEHALDDR Unmodified 1305.6062 0.60617621 4377 Q9H334 FOXP1 Forkhead box protein P1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.982 14.145 3 0.0054225 13380 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 48.044 36.832 63500000 0 0 0 4212900 4735800 4418400 3403300 4816700 4152700 3971900 5854000 5753000 6747400 6994400 8439700 21796 4377 19905 183054;183055;183056;183057;183058;183059;183060;183061;183062;183063;183064;183065 145964;145965;145966;145967;145968;145969 145966 6 HLNTEHALDDR Unmodified 1319.6218 0.62182627 3227 Q8IVH2 FOXP4 Forkhead box protein P4 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 2 1 2 17.942 18.199 3 0.00030612 18485 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 80.69 74.031 140150000 0 0 0 6593000 0 13728000 6793500 9890300 6609800 10971000 13434000 24573000 20127000 10171000 17262000 21797 3227 19906 183066;183067;183068;183069;183070;183071;183072;183073;183074;183075;183076;183077;183078 145970;145971;145972;145973;145974;145975;145976;145977;145978;145979 145971 10 HLNTEHALDDRSTAQCR Unmodified 2022.929 0.92898368 3227 Q8IVH2 FOXP4 Forkhead box protein P4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 21.322 21.743 4 0.003308 21996 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 40.52 30.42 33638000 0 0 0 0 0 0 0 0 3999200 0 0 7601500 12001000 4631100 5405200 21798 3227 19907 183079;183080;183081;183082;183083 145980;145981 145981 2 HLPDNECIEK Unmodified 1253.571 0.57103625 1733 P54136 RARS Arginine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 6.9 3.81 6 2 12 2 4 2 1 1 1 1 1 1 1 1 1 1 1 1 26.918 25.283 2;3 0.001684 31844 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 114.89 93.043 854770000 81811000 519910000 49151000 11398000 9535900 17737000 13142000 9457300 10625000 16118000 18374000 17539000 16433000 15099000 48432000 21799 1733 19908 183084;183085;183086;183087;183088;183089;183090;183091;183092;183093;183094;183095;183096;183097;183098;183099;183100;183101;183102;183103 145982;145983;145984;145985;145986;145987;145988;145989;145990;145991;145992;145993;145994;145995;145996;145997;145998 145988 16 HLPDQEQLNSLSQFK Unmodified 1782.8901 0.89006221 4630 Q9NSV4 DIAPH3 Protein diaphanous homolog 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.08 4 1 21 3 2 1 1 2 1 2 2 2 2 2 2 2 2 72.4 71.777 2;3 0.00017831 90899 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 59.673 52.944 334160000 0 77780000 25208000 2610700 6729700 19981000 6281800 18609000 15714000 25888000 27408000 25693000 15768000 21135000 45352000 21800 4630 19909 183104;183105;183106;183107;183108;183109;183110;183111;183112;183113;183114;183115;183116;183117;183118;183119;183120;183121;183122;183123;183124;183125;183126;183127;183128;183129 145999;146000;146001;146002;146003;146004;146005;146006;146007;146008;146009;146010;146011;146012;146013;146014;146015;146016 146002 16 HLPDRQDGPAAK Unmodified 1303.6633 0.66329715 3686 Q92917 GPKOW G patch domain and KOW motifs-containing protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.24 3.19 2 2 13 2 1 1 1 1 1 2 1 1 1 1 1 1 1 1 11.557 10.839 2;3 3.0309E-06 9149 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 83.182 56.509 759420000 43926000 2250400 6264100 53366000 36629000 53166000 51677000 29303000 27308000 56825000 80542000 87617000 59453000 56874000 114220000 21801 3686 19910 183130;183131;183132;183133;183134;183135;183136;183137;183138;183139;183140;183141;183142;183143;183144;183145;183146 146017;146018;146019;146020;146021;146022;146023;146024;146025;146026;146027;146028;146029;146030;146031;146032 146030 12 HLPEPEGGLK Unmodified 1075.5662 0.56620887 2297 Q13470 TNK1 Non-receptor tyrosine-protein kinase TNK1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 33.381 33.619 2 0.0082115 35936 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 60.59 21.798 50473000 0 0 0 0 3381500 4136100 4173200 3901900 3449800 5492000 6589400 5565500 3488700 4542900 5752000 21802 2297 19911 183147;183148;183149;183150;183151;183152;183153;183154;183155;183156;183157 146033;146034;146035;146036;146037 146035 5 HLPNDPMFK Oxidation (M) 1113.5277 0.52771487 490 O75390 CS Citrate synthase, mitochondrial yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 5 2 1 2 39.602 34.544 2 0.0063096 43441 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 93.429 81.707 145510000 52909000 18229000 74374000 0 0 0 0 0 0 0 0 0 0 0 0 21803 490 19912 183158;183159;183160;183161;183162 146038;146039;146040;146041;146042 146042 635 5 HLPNDPMFK Unmodified 1097.5328 0.53280025 490 O75390 CS Citrate synthase, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 50.608 46.687 2 0.0074778 58862 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 96.668 71.849 27812000 0 0 27812000 0 0 0 0 0 0 0 0 0 0 0 0 21804 490 19912 183163 146043;146044 146044 2 HLPSSDSMSLK Unmodified 1200.5809 0.58087266 578 O76094 SRP72 Signal recognition particle subunit SRP72 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.87 3.54 4 11 1 1 2 1 1 1 1 1 1 1 1 1 1 1 37.815 36.674 2 0.00063009 39158 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 78.939 61.699 401420000 62023000 26589000 36129000 18256000 14630000 17408000 20347000 25429000 0 26448000 23997000 40155000 32827000 21093000 36088000 21805 578 19913 183164;183165;183166;183167;183168;183169;183170;183171;183172;183173;183174;183175;183176;183177;183178 146045;146046;146047;146048;146049;146050;146051;146052;146053;146054;146055;146056;146057;146058 146055 13 HLPSSDSMSLK Oxidation (M) 1216.5758 0.57578728 578 O76094 SRP72 Signal recognition particle subunit SRP72 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 20.907 19.973 2 0.0035317 27025 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.338 64.798 131190000 0 32633000 44879000 0 9303600 12430000 13309000 0 9360900 0 0 0 0 0 9271700 21806 578 19913 183179;183180;183181;183182;183183;183184;183185 146059;146060;146061;146062 146059 734 4 HLPSTEPDPHVVR Unmodified 1482.7579 0.75792582 4162 Q9BUJ2 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36.121 35.282 3 3.5101E-05 38527 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 88.087 75.526 1246900000 70664000 120320 14320000 49653000 42676000 97672000 54579000 58917000 71731000 121570000 115060000 128380000 123260000 113620000 184720000 21807 4162 19914 183186;183187;183188;183189;183190;183191;183192;183193;183194;183195;183196;183197;183198;183199;183200;183201 146063;146064;146065;146066;146067;146068;146069;146070;146071;146072;146073;146074;146075;146076;146077 146065 15 HLPTLDHPIIPADYVAIK Unmodified 2012.1095 0.10949746 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 88.818 84.762 3 0.0010839 106438 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 48.848 34.689 31985000 0 31985000 0 0 0 0 0 0 0 0 0 0 0 0 0 21808 1300 19915 183202;183203 146078;146079;146080 146078 3 HLQAILGGAEVK Unmodified 1234.7034 0.70337105 2097;913 Q03468;P0DP91 ERCC6 DNA excision repair protein ERCC-6 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.46 3.15 5 21 2 1 2 2 1 1 2 2 2 3 1 1 2 2 2 53.684 52.962 2;3 3.9008E-13 75900 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 158.05 118.74 182000000 54809000 0 6740300 8308200 4266200 5588900 7212600 6578500 8946400 13659000 7237400 7659000 15152000 11152000 24687000 21809 2097;913 19916 183204;183205;183206;183207;183208;183209;183210;183211;183212;183213;183214;183215;183216;183217;183218;183219;183220;183221;183222;183223;183224;183225;183226;183227;183228;183229 146081;146082;146083;146084;146085;146086;146087;146088;146089;146090;146091;146092;146093;146094;146095;146096;146097;146098 146090 17 HLQDSLADLK Unmodified 1138.5982 0.59823728 2993 Q6XZF7 DNMBP Dynamin-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 49.903 48.431 2 2.3693E-11 61216 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 161.17 97.695 193150000 8069800 27507000 27582000 13072000 0 17177000 17431000 0 0 23822000 0 9618100 20249000 18273000 10348000 21810 2993 19917 183230;183231;183232;183233;183234;183235;183236;183237;183238;183239;183240 146099;146100;146101;146102;146103;146104;146105 146102 7 HLQEAEQTK Unmodified 1082.5356 0.53563702 3946 Q96P70 IPO9 Importin-9 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 5.8359 5.939 2 3.915E-09 3198 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 163.32 134.17 44901000 0 0 0 2987300 2148800 7772600 4736500 3577700 2374800 4090300 0 4796100 3603000 3044100 5769300 21811 3946 19918 183241;183242;183243;183244;183245;183246;183247;183248;183249;183250;183251 146106;146107;146108;146109;146110;146111;146112 146108 7 HLQELVGQETLPR Unmodified 1518.8154 0.8154407 3580 Q8WX92 NELFB Negative elongation factor B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 2 1 2 2 1 1 1 2 2 1 2 58.352 58.481 2;3 0.0030498 66837 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 67.234 54.357 141870000 0 0 0 7940800 6326000 15503000 8074200 9964500 6728400 12928000 17201000 17262000 11104000 0 28837000 21812 3580 19919 183252;183253;183254;183255;183256;183257;183258;183259;183260;183261;183262;183263;183264;183265;183266;183267;183268 146113;146114;146115;146116;146117;146118;146119;146120 146113 2 HLQLAIRNDEELNK Unmodified 1691.8955 0.89548193 791 Q99878;Q96KK5;Q9BTM1;Q16777;Q93077;Q7L7L0;Q6FI13;P20671;P0C0S8;P04908;Q96QV6;P16104 HIST1H2AJ;HIST1H2AH;H2AFJ;HIST2H2AC;HIST1H2AC;HIST3H2A;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AA;H2AFX Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-B/E;Histone H2A type 1-A;Histone H2AX yes no 0 0 1 By MS/MS 10 0 1 1 47.811 48.543 3 0.024419 53736 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 30.998 23.936 11752000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11752000 21813 791 19920 183269 146121 146121 1 HLQPSQAQPETSIFDVLK Unmodified 2037.0531 0.053104788 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 90.788 82.657 3 0.001868 107263 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 36.637 35.634 14786000 14786000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21814 645 19921 183270 146122 146122 1 HLQTGENHTSVDPR Unmodified 1589.7546 0.75463136 601 O94906 PRPF6 Pre-mRNA-processing factor 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.04 15.21 3 1.8364E-14 14633 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 96.591 84.615 313410000 0 0 0 18645000 8427200 14290000 19397000 17034000 13362000 20589000 34480000 39373000 41676000 42046000 44090000 21815 601 19922 183271;183272;183273;183274;183275;183276;183277;183278;183279;183280;183281;183282 146123;146124;146125;146126;146127;146128;146129;146130;146131;146132;146133;146134;146135;146136;146137 146130 15 HLRDQSTEQSPSDLPQRK Unmodified 2121.0563 0.056292686 3893 Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 yes yes 0 0 2 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 21.18 21.554 4 2.0327E-05 21080 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.188 48.332 57971000 0 0 0 0 0 12259000 0 0 11072000 0 7124600 9656000 0 8840200 9019100 21816 3893 19923 183283;183284;183285;183286;183287;183288 146138;146139;146140;146141 146139 3 HLREEEEEGEK Unmodified 1383.6266 0.62663688 3541 Q8WUD4 CCDC12 Coiled-coil domain-containing protein 12 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6.6721 6.3691 2;3 0.0028579 8015 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 105.98 64.527 90977000 10329000 0 15408000 3431200 3854700 4559900 3693300 3766200 3843100 5144800 6009500 8761100 7119800 5759800 9296200 21817 3541 19924 183289;183290;183291;183292;183293;183294;183295;183296;183297;183298;183299;183300;183301;183302 146142;146143;146144;146145;146146;146147;146148 146144 4 HLREYQDLLNVK Unmodified 1526.8205 0.82052608 870 P08670;Q16352;P07197 VIM;INA;NEFM Vimentin;Alpha-internexin;Neurofilament medium polypeptide no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 19 3 1 2 2 1 1 3 3 3 63.339 63.569 2;3 2.6536E-05 71145 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.793 59.565 214800000 0 0 0 0 0 25317000 0 5345400 12685000 9762200 4690200 10296000 27963000 18739000 100000000 21818 870 19925 183303;183304;183305;183306;183307;183308;183309;183310;183311;183312;183313;183314;183315;183316;183317;183318;183319;183320;183321 146149;146150;146151;146152;146153;146154;146155;146156;146157 146154 9 HLSCTVGDLQTK Unmodified 1357.666 0.66599927 3998 Q96T51 RUFY1 RUN and FYVE domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 33.666 33.819 3 0.0055401 37266 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 35.077 27.352 11816000 0 0 0 0 0 7575000 0 0 0 0 0 0 0 4240600 0 21819 3998 19926 183322;183323 146158;146159 146158 2 HLSDAHNISER Unmodified 1277.6113 0.61126158 1697 P52739 ZNF131 Zinc finger protein 131 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.278 12.427 3 0.0014088 10491 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.5 38.714 47592000 0 0 0 2578200 2576800 3805200 2594400 3588400 2126800 6020500 3365300 4738900 5231300 3757300 7208600 21820 1697 19927 183324;183325;183326;183327;183328;183329;183330;183331;183332;183333;183334;183335 146160;146161;146162;146163;146164;146165;146166;146167;146168 146163 8 HLSDASIK Unmodified 869.46068 0.46068117 2068 Q02040 AKAP17A A-kinase anchor protein 17A yes yes 0 0 0 By MS/MS 2 0 1 1 14.824 12.518 2 0.019736 15945 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 140.09 81.896 21830000 0 0 21830000 0 0 0 0 0 0 0 0 0 0 0 0 21821 2068 19928 183336 146169 146169 0 HLSEALNDK Unmodified 1025.5142 0.5141733 5058 Q9UPT5 EXOC7 Exocyst complex component 7 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 19.229 16.629 2 0.022859 14873 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 78.516 32.836 20657000 0 0 20657000 0 0 0 0 0 0 0 0 0 0 0 0 21822 5058 19929 183337;183338 146170;146171 146170 1 HLSELLK Unmodified 838.49125 0.49125301 380 O43929;Q96NJ5 ORC4;KLHL32 Origin recognition complex subunit 4;Kelch-like protein 32 yes no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 34.984 35.223 2 0.024481 39828 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 97.071 8.3366 178780000 0 0 0 0 8141500 14312000 12191000 13878000 9718900 19285000 19655000 21538000 17682000 20425000 21956000 21823 380 19930 183339;183340;183341;183342;183343;183344;183345;183346;183347;183348;183349 146172;146173;146174 146174 3 HLSEPIAVDPK Unmodified 1204.6452 0.64518747 2086 Q03001 DST Dystonin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 7.33 3.77 2 4 1 1 1 1 1 1 44.373 42.962 2 0.00051722 54505 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 99.442 75.287 32625000 0 18293000 4680900 0 0 2886800 0 1645400 0 2121900 0 0 0 0 2997000 21824 2086 19931 183350;183351;183352;183353;183354;183355 146175;146176;146177;146178;146179 146179 5 HLSGEFGK Unmodified 873.43447 0.43446642 975 P13051 UNG Uracil-DNA glycosylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 20.537 16.827 2 0.0025159 22145 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.18 89.566 217730000 139710000 29444000 48575000 0 0 0 0 0 0 0 0 0 0 0 0 21825 975 19932 183356;183357;183358 146180;146181;146182 146180 3 HLSIILEK Unmodified 951.57532 0.57531699 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 0 By MS/MS 10 0 1 1 51.09 51.785 2 0.031953 57631 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.611 19.362 7308200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7308200 21826 2446 19933 183359 146183 146183 1 HLSLQPFQK Unmodified 1096.6029 0.60292873 3657 Q92766 RREB1 Ras-responsive element-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 52.922 52.3 2 0.0032531 58435 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 90.657 55.849 115950000 5710600 0 0 4873200 4130500 11751000 8461400 0 9558800 0 8783800 16559000 11660000 14818000 19639000 21827 3657 19934 183360;183361;183362;183363;183364;183365;183366;183367;183368;183369;183370;183371;183372 146184;146185;146186;146187;146188;146189;146190;146191;146192;146193;146194;146195;146196;146197;146198 146184 15 HLSPYATLTVGDSSHK Unmodified 1711.8529 0.85294842 4128 Q9BSJ8 ESYT1 Extended synaptotagmin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 50.784 49.532 3 1.6328E-10 53817 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.331 57.413 160720000 35994000 6974200 0 0 0 0 0 0 12749000 12992000 17195000 16617000 19409000 17575000 21219000 21828 4128 19935 183373;183374;183375;183376;183377;183378;183379;183380;183381;183382 146199;146200;146201;146202;146203;146204;146205;146206;146207;146208 146202 9 HLSQEDNDLNK Unmodified 1311.6055 0.6055075 3334 Q8N4S0 CCDC82 Coiled-coil domain-containing protein 82 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 13.038 12.371 2 3.7368E-09 15741 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 133.89 107.11 21031000 0 14325000 814130 0 0 0 643450 0 0 1350700 0 0 1118800 1104800 1673300 21829 3334 19936 183383;183384;183385;183386;183387;183388;183389;183390 146209;146210;146211;146212;146213 146209 5 HLSSQNRYFSEADK Unmodified 1680.7856 0.78559713 964 P12268 IMPDH2 Inosine-5'-monophosphate dehydrogenase 2 yes yes 0 0 1 By MS/MS 2 0 2 2 38.463 31.934 3 0.00036608 43954 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.789 59.627 285040000 285040000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21830 964 19937 183391;183392 146214;146215 146214 2 HLSTPSSVSPEPQDSAK Unmodified 1765.8483 0.84825697 4778 Q9NZN5 ARHGEF12 Rho guanine nucleotide exchange factor 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 6 4 2 2 1 1 1 1 35.822 33.969 3 0.00026514 44375 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 52.42 39.002 39989000 0 23314000 6332300 0 0 0 0 0 0 0 0 0 0 4514100 5829100 21831 4778 19938 183393;183394;183395;183396 146216;146217 146216 2 HLSVNDLPVGR Unmodified 1205.6517 0.65166983 1265 P30048 PRDX3 Thioredoxin-dependent peroxide reductase, mitochondrial yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 2 1 1 1 1 55.347 55.59 2;3 0.003672 61997 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.419 38.524 50642000 0 0 0 0 0 4472300 3528400 3682400 0 2975400 9392000 0 3292800 9391900 13907000 21832 1265 19939 183397;183398;183399;183400;183401;183402;183403;183404;183405 146218;146219;146220 146219 2 HLTASEAK Unmodified 855.44503 0.4450311 1405 P39748 FEN1 Flap endonuclease 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 4.83 3.67 3 1 2 1 2 1 1 1 6.0874 4.3001 2 5.4066E-13 4678 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 167.9 105.9 2639800000 339030000 1370900000 925470000 0 3822800 0 0 0 0 0 0 580360 0 0 0 21833 1405 19940 183406;183407;183408;183409;183410;183411 146221;146222;146223;146224;146225 146222 5 HLTDAYFK Unmodified 993.49198 0.4919813 2083 Q02878 RPL6 60S ribosomal protein L6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 40.821 39.467 2 0.0067642 43392 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 98.009 68.699 680710000 249910000 29742000 0 18184000 15813000 24720000 21349000 24313000 0 44395000 30953000 54278000 50239000 44971000 71844000 21834 2083 19941 183412;183413;183414;183415;183416;183417;183418;183419;183420;183421;183422;183423;183424;183425;183426 146226;146227;146228;146229;146230;146231;146232;146233;146234;146235;146236;146237;146238;146239;146240;146241 146237 16 HLTESTNQK Unmodified 1056.52 0.51998696 3992 Q96SN8 CDK5RAP2 CDK5 regulatory subunit-associated protein 2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 5.8793 2.5785 2 0.00082652 4625 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145.16 55.403 56486000 0 56486000 0 0 0 0 0 0 0 0 0 0 0 0 0 21835 3992 19942 183427;183428 146242 146242 1 HLTGEFEK Unmodified 959.47125 0.47124585 1912 P62826 RAN GTP-binding nuclear protein Ran yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 19.964 20.136 2 0.03661 20955 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 51.787 33.005 93155000 0 0 0 5439000 4637600 5322300 5658900 3522700 0 4805000 0 6115600 6015800 11460000 40178000 21836 1912 19943 183429;183430;183431;183432;183433;183434;183435;183436;183437;183438 146243 146243 1 HLTHAQSTLDAK Unmodified 1320.6786 0.67861287 2499 Q15125 EBP 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.04 2.6 3 22 2 1 1 2 2 2 2 2 2 2 2 1 2 2 13.504 13.205 2;3 7.3056E-05 19304 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 118.76 101.39 410010000 106400000 0 12612000 16899000 15507000 22260000 21390000 22866000 17908000 43347000 24795000 39424000 22450000 14322000 29834000 21837 2499 19944 183439;183440;183441;183442;183443;183444;183445;183446;183447;183448;183449;183450;183451;183452;183453;183454;183455;183456;183457;183458;183459;183460;183461;183462;183463 146244;146245;146246;146247;146248;146249;146250;146251;146252;146253;146254;146255;146256;146257;146258;146259 146250 10 HLTHENVQR Unmodified 1132.5738 0.57375386 2202 Q12874 SF3A3 Splicing factor 3A subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 6.4774 6.611 2 0.0061449 4414 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 75.854 18.295 10622000 0 0 0 0 1174700 851410 0 1632900 1304200 0 1671000 798030 1401600 1787700 0 21838 2202 19945 183464;183465;183466;183467;183468;183469;183470;183471 146260;146261 146260 2 HLTHENVQRK Unmodified 1260.6687 0.66871688 2202 Q12874 SF3A3 Splicing factor 3A subunit 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 5.7112 5.8291 3 0.00017424 3065 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 108.43 84.088 62697000 0 0 0 2883900 0 3983900 6534600 8031700 6339500 5683500 0 8035700 0 5440800 15763000 21839 2202 19946 183472;183473;183474;183475;183476;183477;183478;183479;183480;183481 146262;146263;146264;146265;146266;146267;146268;146269;146270;146271 146265 10 HLTNVSNHSK Unmodified 1135.5734 0.57341951 7 A1A4S6 ARHGAP10 Rho GTPase-activating protein 10 yes yes 0 0 0 By MS/MS 2 0 1 1 6.7591 3.3269 2 9.214E-06 6400 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 140.45 124.31 12150000 12150000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21840 7 19947 183482 146272 146272 1 HLTPEPDIVASTK Unmodified 1406.7405 0.74054442 2734 Q5JSH3 WDR44 WD repeat-containing protein 44 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.64 1.67 1 21 1 1 2 1 2 2 2 2 2 2 1 2 2 47.902 47.911 2;3 2.1527E-05 53892 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 89.43 79.426 197530000 0 0 3810800 8095500 8134200 5838000 14076000 9854800 10023000 14421000 33476000 28910000 3503100 18180000 39212000 21841 2734 19948 183483;183484;183485;183486;183487;183488;183489;183490;183491;183492;183493;183494;183495;183496;183497;183498;183499;183500;183501;183502;183503;183504 146273;146274;146275;146276;146277;146278;146279;146280;146281;146282;146283 146274 10 HLTPSTLTQIDYNEK Unmodified 1758.8788 0.87882882 726 P00451 F8 Coagulation factor VIII;Factor VIIIa heavy chain, 200 kDa isoform;Factor VIIIa heavy chain, 92 kDa isoform;Factor VIII B chain;Factor VIIIa light chain yes yes 0 0 0 By matching By matching By MS/MS By matching 10 0 4 1 1 1 1 23.664 23.906 4 0.033987 24766 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 17.629 7.8288 11194000 0 0 0 0 0 0 2425300 0 1283700 0 4020700 0 0 3463900 0 21842 726 19949 183505;183506;183507;183508 146284 146284 1 HLTPVTLELGGK Unmodified 1263.7187 0.71868677 1665;1477 P51648;P43353 ALDH3A2;ALDH3B1 Fatty aldehyde dehydrogenase;Aldehyde dehydrogenase family 3 member B1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65.867 65.023 2 0.0028161 72989 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.228 46.418 80837000 36863000 0 2869500 3356400 1254400 3347400 2228300 2275000 2350900 4318200 0 5686900 3333600 3515900 9437200 21843 1665;1477 19950 183509;183510;183511;183512;183513;183514;183515;183516;183517;183518;183519;183520;183521;183522 146285;146286;146287;146288;146289;146290;146291;146292;146293 146287 9 HLTSNSPR Unmodified 910.46208 0.46207815 1010 P14923 JUP Junction plakoglobin yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 5.7377 5.8551 2 0.01331 3597 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 141.52 87.964 148130000 0 0 0 42453000 9478100 10427000 8909700 49484000 6636000 2272100 1064000 4525600 6506500 2402100 3974400 21844 1010 19951 183523;183524;183525;183526;183527;183528;183529;183530;183531;183532;183533;183534 146294;146295;146296;146297 146295 1 HLTSRHPEAEMAQNSVR Oxidation (M) 1977.9439 0.94390546 1010 P14923 JUP Junction plakoglobin yes yes 0 1 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching 10 0 7 1 1 1 1 1 1 1 18.263 18.396 4 0.00073292 20327 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 52.172 52.172 49476000 0 0 0 15549000 0 3765700 3215800 15122000 0 3522700 1701200 0 6599100 0 0 21845 1010 19952 183535;183536;183537;183538;183539;183540;183541 146298;146299 146299 1395 2 HLTSRHPEAEMAQNSVR Unmodified 1961.949 0.94899084 1010 P14923 JUP Junction plakoglobin yes yes 0 0 1 By MS/MS By MS/MS By matching 10 0 3 1 1 1 27.505 27.783 4 0.027141 29338 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 28.869 19.586 26607000 0 0 0 0 0 0 0 13155000 0 0 0 0 9367000 4085500 0 21846 1010 19952 183542;183543;183544 146300;146301 146301 1 HLTVGLPPEPREK Unmodified 1471.8147 0.81471242 1494 P46020 PHKA1 Phosphorylase b kinase regulatory subunit alpha, skeletal muscle isoform yes yes 0 0 1 By MS/MS 2 0 1 1 58.891 50.685 3 0.019694 68718 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.382 33.849 10506000 10506000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21847 1494 19953 183545 146302 146302 1 HLTYENVER Unmodified 1159.5622 0.56218613 2593 Q15907;P62491 RAB11B;RAB11A Ras-related protein Rab-11B;Ras-related protein Rab-11A yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 1 2 2 2 26.327 26.505 2;3 0.0050681 28259 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 98.523 54.128 1115200000 0 0 0 37125000 62012000 127810000 87236000 90864000 61996000 138580000 135550000 26389000 110650000 92295000 144700000 21848 2593 19954 183546;183547;183548;183549;183550;183551;183552;183553;183554;183555;183556;183557;183558;183559;183560;183561;183562;183563;183564;183565;183566;183567;183568 146303;146304;146305;146306;146307;146308;146309;146310;146311;146312;146313;146314 146307 9 HLVDEPQNLIK Unmodified 1304.7089 0.70885036 65 CON__P02769 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.31 3.2 5 2 25 4 3 3 2 2 2 2 2 2 2 2 2 2 2 56.526 55.582 2;3 3.7252E-37 63934 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 182.92 138.17 + 2887700000 0 63798000 123690000 371290000 299450000 155410000 160780000 169610000 162410000 365270000 319500000 205590000 145960000 150470000 194440000 21849 65 19955 183569;183570;183571;183572;183573;183574;183575;183576;183577;183578;183579;183580;183581;183582;183583;183584;183585;183586;183587;183588;183589;183590;183591;183592;183593;183594;183595;183596;183597;183598;183599;183600 146315;146316;146317;146318;146319;146320;146321;146322;146323;146324;146325;146326;146327;146328;146329;146330;146331;146332;146333;146334;146335;146336;146337;146338;146339;146340;146341;146342;146343;146344;146345;146346 146342 24 HLVEENCEAVPHR Unmodified 1588.7416 0.74162383 4670 Q9NVM4 PRMT7 Protein arginine N-methyltransferase 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 26.982 27.495 3 8.6423E-07 28344 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.927 61.545 27607000 0 0 0 0 0 0 0 0 0 0 0 0 10624000 0 16982000 21850 4670 19956 183601;183602;183603 146347;146348;146349 146347 3 HLVEMDTDQLK Unmodified 1327.6442 0.6442012 2310 Q13535 ATR Serine/threonine-protein kinase ATR yes yes 0 0 0 By MS/MS 2 0 1 1 54.643 48.837 2 0.00046753 63263 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.38 74.867 10077000 0 10077000 0 0 0 0 0 0 0 0 0 0 0 0 0 21851 2310 19957 183604 146350 146350 1 HLVESTNEMAPLK Unmodified 1467.7392 0.73916421 4751 Q9NYU2 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.21 3.75 4 1 9 1 3 1 1 1 1 1 1 1 1 1 1 48.982 47.103 2;3 1.8347E-21 63196 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.24 125.96 242920000 11515000 151610000 37428000 0 2060000 7007000 1953900 5149900 0 0 5752800 4210800 4388300 4406300 7444700 21852 4751 19958 183605;183606;183607;183608;183609;183610;183611;183612;183613;183614;183615;183616;183617;183618 146351;146352;146353;146354;146355;146356;146357;146358;146359;146360;146361;146362;146363;146364 146352 12 HLVESTNEMAPLK Oxidation (M) 1483.7341 0.73407884 4751 Q9NYU2 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes yes 0 1 0 By MS/MS By MS/MS 2.4 0.49 3 2 2 3 37.108 33.116 2;3 1.9539E-06 41834 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 107.83 95.618 48547000 0 7761700 40785000 0 0 0 0 0 0 0 0 0 0 0 0 21853 4751 19958 183619;183620;183621;183622;183623 146365;146366;146367;146368;146369 146369 6126 4 HLVGVDSLIGPETQIGEK Unmodified 1891.0051 0.005091963 4593 Q9NR50 EIF2B3 Translation initiation factor eIF-2B subunit gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.71 3.81 4 2 8 2 2 2 1 1 1 1 1 1 1 1 80.265 78.571 2;3 9.7871E-29 99889 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 126.63 107.55 300690000 35432000 155830000 41652000 0 0 6423800 0 4864900 4878200 8033300 7551800 0 4914400 6194800 24910000 21854 4593 19959 183624;183625;183626;183627;183628;183629;183630;183631;183632;183633;183634;183635;183636;183637 146370;146371;146372;146373;146374;146375;146376;146377;146378;146379;146380;146381;146382 146376 13 HLVHKPSEER Unmodified 1230.6469 0.64691881 1301 P31350 RRM2 Ribonucleoside-diphosphate reductase subunit M2 yes yes 0 0 1 By matching By matching By MS/MS 10 0 3 1 1 1 7.8533 8.1363 3 0.0092675 5546 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.704 22.894 19886000 0 0 0 0 0 0 0 0 0 0 3414800 0 1054800 0 15417000 21855 1301 19960 183638;183639;183640 146383 146383 1 HLVLPIALNK Unmodified 1116.7019 0.70191449 3996 Q96SY0 VWA9 von Willebrand factor A domain-containing protein 9 yes yes 0 0 0 By matching By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 76.041 76.176 2 0.00098104 87348 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 111.04 84.343 15752000 0 0 0 0 0 1792500 0 2548300 0 1647700 0 0 1527800 0 8235500 21856 3996 19961 183641;183642;183643;183644;183645 146384 146384 1 HLVMGDIPAAVNAFQEAASLLGK Oxidation (M) 2367.2257 0.2256662 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 1 0 By MS/MS 3 0 1 1 99.2 95.849 3 2.2953E-07 114920 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 71.148 62.86 3615000 0 3615000 0 0 0 0 0 0 0 0 0 0 0 0 0 21857 1564 19962 183646 146385 146385 2485 1 HLVMGDIPAAVNAFQEAASLLGK Unmodified 2351.2308 0.23075158 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 0 0 By MS/MS 3 0 1 1 100.76 97.283 3 0.0010269 116780 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 43.198 39.861 2897300 0 2897300 0 0 0 0 0 0 0 0 0 0 0 0 0 21858 1564 19962 183647 146386 146386 1 HLVQQEGQLEQQER Unmodified 1720.8493 0.84926002 843 P07476 IVL Involucrin yes yes 0 0 0 By MS/MS 10 0 1 1 29.782 29.469 3 0.00099927 32228 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 39.163 26.878 6792000 0 0 0 6792000 0 0 0 0 0 0 0 0 0 0 0 21859 843 19963 183648 146387 146387 1 HLVQQEGQLK Unmodified 1178.6408 0.6407708 843 P07476 IVL Involucrin yes yes 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 19.737 19.797 2 2.1761E-68 20535 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 200.6 129.1 16933000 0 0 0 12649000 0 0 0 2283100 0 2000700 0 0 0 0 0 21860 843 19964 183649;183650;183651 146388;146389 146389 2 HLVSLTER Unmodified 953.52943 0.52942943 4190 Q9BVJ7 DUSP23 Dual specificity protein phosphatase 23 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 31.37 31.508 2 0.032702 33196 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 54.157 22.868 122950000 0 0 0 7480600 10169000 14338000 9730400 10578000 7293400 12870000 11720000 15176000 14326000 9268400 0 21861 4190 19965 183652;183653;183654;183655;183656;183657;183658;183659;183660;183661;183662 146390;146391;146392 146391 3 HLVTDNPSK Unmodified 1009.5193 0.51925868 2835 Q5W0B1 RNF219 RING finger protein 219 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 10.81 9.9476 2 0.00099893 15284 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 142.04 64.972 94176000 15198000 28795000 19937000 2063900 2184000 3049700 3277000 2245300 2062000 2669600 5052100 0 3988700 3652900 0 21862 2835 19966 183663;183664;183665;183666;183667;183668;183669;183670;183671;183672;183673;183674;183675;183676;183677 146393;146394;146395;146396;146397;146398;146399;146400;146401;146402;146403;146404 146399 12 HLVVPGDTITTDTGFMR Oxidation (M) 1874.9196 0.91964777 2349 Q13868 EXOSC2 Exosome complex component RRP4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 70.841 70.93 3 0.00028875 81526 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.695 47.727 14075000 0 0 0 0 0 4494500 0 0 0 0 0 0 4678900 4902000 0 21863 2349 19967 183678;183679;183680 146405 146405 3835 1 HLVYESDK Unmodified 989.48181 0.48181054 2515 Q15293 RCN1 Reticulocalbin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 15.395 14.634 2 0.00017401 13158 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 154.31 127.71 1115000000 52258000 171260000 295590000 18318000 17134000 16858000 19510000 19267000 17776000 38233000 106420000 82718000 31842000 65522000 162280000 21864 2515 19968 183681;183682;183683;183684;183685;183686;183687;183688;183689;183690;183691;183692;183693;183694;183695;183696 146406;146407;146408;146409;146410;146411;146412;146413;146414;146415;146416;146417;146418;146419 146415 11 HLVYESDQNK Unmodified 1231.5833 0.5833155 376 O43852 CALU Calumenin yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 16.239 15.322 2 3.7518E-215 13954 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 247.75 176.84 295560000 3458200 25280000 16775000 9632200 8025900 0 9972000 8620800 4466400 13738000 0 47574000 23242000 37865000 86911000 21865 376 19969 183697;183698;183699;183700;183701;183702;183703;183704;183705;183706;183707;183708;183709;183710;183711;183712 146420;146421;146422;146423;146424;146425;146426;146427;146428;146429;146430;146431;146432;146433;146434;146435 146425 15 HLWDYTFGPEK Unmodified 1391.651 0.65100113 1836 P61160 ACTR2 Actin-related protein 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 8 3.46 1 3 1 1 1 1 77.02 74.453 2 1.0396E-05 85454 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 138.66 101.18 39747000 21485000 0 0 0 0 0 0 0 0 0 0 0 1812200 0 16450000 21866 1836 19970 183713;183714;183715;183716 146436;146437;146438 146437 3 HLWENLGEK Unmodified 1124.5615 0.56145784 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS 2 0 1 1 58.046 49.841 2 0.02624 67950 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.812 46.458 6759600 6759600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21867 5049 19971 183717 146439 146439 1 HLYEEYVEK Unmodified 1208.5714 0.57135383 4552 Q9NPI1 BRD7 Bromodomain-containing protein 7 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.57 3.96 3 4 1 1 1 1 1 1 1 39.704 37.709 2 0.0039854 40547 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 97.635 57.568 78740000 12287000 17984000 18876000 0 0 5764700 0 0 0 3929700 0 5722000 0 0 14177000 21868 4552 19972 183718;183719;183720;183721;183722;183723;183724 146440;146441;146442;146443;146444;146445 146442 6 HLYLAEEER Unmodified 1158.5669 0.56693715 4789 Q9P031 CCDC59 Thyroid transcription factor 1-associated protein 26 yes yes 0 0 0 By MS/MS 10 0 1 1 33.38 33.715 2 0.042756 37024 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 60.91 31.749 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21869 4789 19973 183725 146446 146446 1 HLYLTEK Unmodified 902.48617 0.48616764 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 24.551 24.699 2 0.044016 25898 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 66.993 17.403 13064000 0 0 0 0 0 0 0 0 5305300 7758600 0 0 0 0 0 21870 2775 19974 183726;183727 146447 146447 1 HMAAASAECQNYAK Unmodified 1550.6606 0.66059632 4817 Q9P2E9 RRBP1 Ribosome-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 22.549 19.135 3 0.0021374 25642 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.781 49.494 10706000 0 7608500 3097400 0 0 0 0 0 0 0 0 0 0 0 0 21871 4817 19975 183728;183729 146448 146448 1 HMIYEESGNK Unmodified 1206.5339 0.53392246 3238 Q8IWC1 MAP7D3 MAP7 domain-containing protein 3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 17.757 18.04 2 0.010798 16867 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 55.37 34.85 9884600 0 0 0 0 1030000 0 0 0 0 0 2351400 0 1800000 1630300 3073000 21872 3238 19976 183730;183731;183732;183733;183734 146449;146450 146450 2 HMLADVFSVK Oxidation (M) 1161.5852 0.58522975 4031 Q99598 TSNAX Translin-associated protein X yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 70.596 64.087 2 6.1538E-06 85692 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 143.03 124.25 83656000 63206000 14409000 6040300 0 0 0 0 0 0 0 0 0 0 0 0 21873 4031 19977 183735;183736;183737;183738 146451;146452;146453;146454 146453 5530 4 HMLADVFSVK Unmodified 1145.5903 0.59031513 4031 Q99598 TSNAX Translin-associated protein X yes yes 0 0 0 By MS/MS 2 0 1 1 81.109 72.978 2 0.0018895 95655 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 123.86 92.438 10928000 10928000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21874 4031 19977 183739 146455 146455 1 HMLDLQK Unmodified 883.45857 0.45857268 4592 Q9NR46 SH3GLB2 Endophilin-B2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 29.731 29.831 2 0.026251 32068 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 79.116 37.908 47714000 0 0 0 6176000 5397300 0 0 10888000 5358200 0 0 0 0 13505000 6389400 21875 4592 19978 183740;183741;183742;183743;183744;183745 146456;146457 146456 2 HMLGLPSTLFTPR Oxidation (M) 1484.781 0.78096945 206 O14733 MAP2K7 Dual specificity mitogen-activated protein kinase kinase 7 yes yes 0 1 0 By MS/MS By matching By matching By MS/MS 10 0 4 1 1 1 1 79.531 79.655 3 0.00074346 91699 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.802 50.122 18567000 0 0 0 0 0 4553600 0 0 0 1836200 0 3497300 0 0 8680300 21876 206 19979 183746;183747;183748;183749 146458;146459 146459 274 2 HMLPGLSHNK Oxidation (M) 1148.5761 0.57606205 3631 Q92576 PHF3 PHD finger protein 3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 18.503 18.661 3 0.0023417 19624 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 60.518 52.952 79587000 0 0 0 8037000 5858400 7566800 8896900 4773600 9878200 5816000 0 11745000 6213700 3442700 7358500 21877 3631 19980 183750;183751;183752;183753;183754;183755;183756;183757;183758;183759;183760 146460;146461;146462;146463 146460 5129 4 HMLPTVLR Unmodified 965.54806 0.54805639 1271 P30153 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 51.521 51.805 2 0.0091572 57078 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.801 69.136 47710000 0 0 0 0 0 10837000 0 4742400 0 0 0 0 0 5858800 26272000 21878 1271 19981 183761;183762;183763;183764 146464;146465;146466;146467 146465 4 HMLQVDPMK 2 Oxidation (M) 1129.526 0.52600032 2238 Q13131 PRKAA1 5'-AMP-activated protein kinase catalytic subunit alpha-1 yes yes 0 2 0 By MS/MS By MS/MS 2 0 2 1 1 23.578 19.607 2 0.024596 27663 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.113 57.592 39838000 30640000 0 9198400 0 0 0 0 0 0 0 0 0 0 0 0 21879 2238 19982 183765;183766 146468;146469 146468 1 HMLYVSSELHR Oxidation (M) 1386.6714 0.671419 775 P04150 NR3C1 Glucocorticoid receptor yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 35.19 35.463 3 0.00174 39069 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 57.347 46.134 44996000 0 0 0 0 0 9955200 0 2399800 7458000 0 0 15373000 9810500 0 0 21880 775 19983 183767;183768;183769;183770;183771;183772 146470;146471;146472;146473;146474 146473 931 5 HMMAFIEQEANEK 2 Oxidation (M) 1608.6912 0.69122774 1375 P36543;Q96A05 ATP6V1E1;ATP6V1E2 V-type proton ATPase subunit E 1;V-type proton ATPase subunit E 2 yes no 0 2 0 By MS/MS By MS/MS 6 4 1 1 1 1 35.549 32.206 3 0.0027084 40410 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 56.122 52.804 9718100 0 0 9718100 0 0 0 0 0 0 0 0 0 0 0 0 21881 1375 19984 183773;183774 146475;146476 146476 2130;2131 2 HMMAFIEQEANEK Oxidation (M) 1592.6963 0.69631312 1375 P36543;Q96A05 ATP6V1E1;ATP6V1E2 V-type proton ATPase subunit E 1;V-type proton ATPase subunit E 2 yes no 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 52.463 46.451 3 1.9514E-10 64105 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 115.14 101.39 17955000 13871000 0 4084500 0 0 0 0 0 0 0 0 0 0 0 0 21882 1375 19984 183775;183776 146477;146478;146479 146478 2130;2131 3 HMMAFIEQEANEK Unmodified 1576.7014 0.7013985 1375 P36543;Q96A05 ATP6V1E1;ATP6V1E2 V-type proton ATPase subunit E 1;V-type proton ATPase subunit E 2 yes no 0 0 0 By MS/MS 2 0 1 1 72.858 64.661 3 0.001607 85695 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.568 41.351 13796000 13796000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21883 1375 19984 183777 146480 146480 1 HMNETGVHK Unmodified 1051.4869 0.48691269 238 O14981 BTAF1 TATA-binding protein-associated factor 172 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 6.0864 3.2677 2 0.0011401 5971 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 139.74 103.04 43701000 39530000 0 4170400 0 0 0 0 0 0 0 0 0 0 0 0 21884 238 19985 183778;183779 146481;146482 146481 2 HMNLILCDCDEFRK Oxidation (M) 1865.8223 0.82225869 1005 P63162;P14678 SNRPN;SNRPB Small nuclear ribonucleoprotein-associated protein N;Small nuclear ribonucleoprotein-associated proteins B and B' yes no 0 1 1 By MS/MS 2 0 1 1 66.377 58.083 3 1.892E-06 77945 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.32 95.54 13346000 13346000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21885 1005 19986 183780 146483;146484 146484 1372 2 HMNLLADLK Oxidation (M) 1069.559 0.559015 2159;2158 Q08499;Q08493 PDE4D;PDE4C cAMP-specific 3',5'-cyclic phosphodiesterase 4D;cAMP-specific 3',5'-cyclic phosphodiesterase 4C no no 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 52.463 52.552 2 0.0049254 57711 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.325 42.949 55917000 0 0 0 1840500 1843700 5000100 3495500 2301200 4269900 0 5157000 0 7982300 9013900 15013000 21886 2159;2158 19987 183781;183782;183783;183784;183785;183786;183787;183788;183789;183790;183791 146485;146486 146486 3469 2 HMNLLADLK Unmodified 1053.5641 0.56410038 2159;2158 Q08499;Q08493 PDE4D;PDE4C cAMP-specific 3',5'-cyclic phosphodiesterase 4D;cAMP-specific 3',5'-cyclic phosphodiesterase 4C no no 0 0 0 By MS/MS 2 0 1 1 78.797 70.666 2 0.00039865 92929 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 125.82 97.711 9530800 9530800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21887 2159;2158 19987 183792 146487 146487 1 HMNSVPQK Oxidation (M) 955.45455 0.45454993 1797 P57740 NUP107 Nuclear pore complex protein Nup107 yes yes 0 1 0 By MS/MS By MS/MS 2.5 0.5 2 2 2 2 5.824 2.4152 2 0.010574 3865 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 104.21 81.19 108720000 943180 107780000 0 0 0 0 0 0 0 0 0 0 0 0 0 21888 1797 19988 183793;183794;183795;183796 146488;146489;146490 146489 2916 3 HMPPNLQK Unmodified 963.49602 0.49602082 4118 Q9BRT9 GINS4 DNA replication complex GINS protein SLD5;DNA replication complex GINS protein SLD5, N-terminally processed yes yes 0 0 0 By MS/MS 2 0 1 1 27.122 21.733 2 0.042045 30842 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 92.692 37.251 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21889 4118 19989 183797 146491 146491 1 HMQAELQQQQAVLAK Unmodified 1721.8883 0.88828807 3964 Q96R06 SPAG5 Sperm-associated antigen 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 45.767 45.295 3 0.00011969 60382 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 47.506 42.604 97041000 0 22925000 0 0 3856100 0 0 6469700 4679100 0 13077000 17091000 0 10113000 18830000 21890 3964 19990 183798;183799;183800;183801;183802;183803;183804;183805 146492;146493;146494;146495;146496 146492 4 HMQAELQQQQAVLAK Oxidation (M) 1737.8832 0.88320269 3964 Q96R06 SPAG5 Sperm-associated antigen 5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 37.563 36.202 3 0.00064971 38516 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.214 36.944 50572000 0 16100000 13553000 5453200 0 0 6184400 3267800 0 0 0 0 0 0 6014500 21891 3964 19990 183806;183807;183808;183809;183810;183811 146497;146498;146499 146497 5447 3 HMQANPEPPKK Unmodified 1275.6394 0.63939059 2530 Q15404 RSU1 Ras suppressor protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 8.6047 8.8543 3 0.018784 5928 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 33.875 14.419 30006000 0 0 0 0 0 0 0 0 945420 2354100 10593000 4541300 2740100 2085000 6747800 21892 2530 19991 183812;183813;183814;183815;183816;183817;183818 146500;146501;146502;146503;146504 146502 4 HMQNSEIIRK Oxidation (M) 1270.6452 0.64520425 3326 Q8N3U4 STAG2 Cohesin subunit SA-2 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 7.9521 8.2091 3 0.00085156 6755 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.282 66.96 42926000 0 0 0 0 0 0 0 0 3282100 0 16204000 11947000 0 0 11492000 21893 3326 19992 183819;183820;183821;183822 146505;146506;146507;146508 146508 4917 3 HMQNSEIIRK Unmodified 1254.6503 0.65028963 3326 Q8N3U4 STAG2 Cohesin subunit SA-2 yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 13.873 14.061 3 0.0036969 12509 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 44.318 34.313 56338000 0 0 0 0 4742900 6964000 0 4038600 0 9501900 8062400 7990200 7691000 7347400 0 21894 3326 19992 183823;183824;183825;183826;183827;183828;183829;183830 146509;146510;146511;146512 146510 4 HMQSQQLENYK Unmodified 1404.6456 0.64559818 3824 Q96EV8 DTNBP1 Dysbindin yes yes 0 0 0 By MS/MS By MS/MS 2 0 5 3 2 28.783 24.445 2;3 0.0004007 34426 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 115.78 101.64 28280000 19902000 0 8378200 0 0 0 0 0 0 0 0 0 0 0 0 21895 3824 19993 183831;183832;183833;183834;183835 146513;146514;146515 146513 3 HMQSQQLENYKK Oxidation (M) 1548.7355 0.73547582 3824 Q96EV8 DTNBP1 Dysbindin yes yes 0 1 1 By MS/MS 2 0 1 1 15.539 11.427 3 0.0014696 16977 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.252 51.114 7211800 7211800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21896 3824 19994 183836 146516 146516 5348 1 HMSVSSIK Unmodified 887.45349 0.4534873 1030 P15927 RPA2 Replication protein A 32 kDa subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 19.887 19.553 2 0.0085533 20208 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 85.813 27.126 588060000 483310000 0 0 0 3915400 12147000 6294600 0 5092000 19043000 15017000 0 10104000 10553000 22579000 21897 1030 19995 183837;183838;183839;183840;183841;183842;183843;183844;183845;183846 146517;146518;146519;146520;146521 146517 5 HMSVSSIK Oxidation (M) 903.4484 0.44840192 1030 P15927 RPA2 Replication protein A 32 kDa subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS 7.25 3.75 6 1 13 2 3 2 2 1 1 1 1 1 2 1 1 2 8.7892 7.7579 2 0.0060606 11827 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 116.25 61.725 989760000 651520000 150740000 126210000 3712200 1674800 4397000 0 2607700 1458400 7229300 0 18059000 3532200 3033700 15572000 21898 1030 19995 183847;183848;183849;183850;183851;183852;183853;183854;183855;183856;183857;183858;183859;183860;183861;183862;183863;183864;183865;183866 146522;146523;146524;146525;146526;146527;146528;146529 146525 1451 8 HMVRATAEVSSGCTR Unmodified 1660.7774 0.77735741 5389 yes yes 0 0 1 By MS/MS 10 0 1 1 28.183 28.319 3 0.033944 30367 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 17.962 0 + 3529700 0 0 0 0 0 0 0 0 3529700 0 0 0 0 0 0 21899 5389 19996 183867 146530 146530 1 HMYHSLYLK Unmodified 1190.5906 0.59064948 2015 P84098 RPL19 60S ribosomal protein L19 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching 10 0 5 1 1 1 1 1 38.864 39.173 3 0.0088943 43949 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 50.04 30.909 26747000 0 0 0 0 0 5737600 0 0 3158500 0 0 8872600 5299100 3678800 0 21900 2015 19997 183868;183869;183870;183871;183872 146531;146532;146533 146531 2 HNAAFCYK Unmodified 1009.444 0.44398525 2045 Q00796 SORD Sorbitol dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 25.141 20.92 2 0.0059379 26712 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 117.16 89.843 901610000 672920000 84492000 144200000 0 0 0 0 0 0 0 0 0 0 0 0 21901 2045 19998 183873;183874;183875;183876;183877 146534;146535;146536;146537;146538 146536 4 HNADALSDRFEK Unmodified 1401.6637 0.66369108 4894 Q9UHB7 AFF4 AF4/FMR2 family member 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 30.351 29.81 3 0.0021032 43327 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.65 45.046 44992000 6972300 0 0 0 0 3365900 4429200 3427700 4270600 4238000 6652900 0 6547100 5088400 0 21902 4894 19999 183878;183879;183880;183881;183882;183883;183884;183885;183886 146539;146540 146539 2 HNALIQEVISQSR Unmodified 1493.795 0.79503961 2329 Q13617 CUL2 Cullin-2 yes yes 0 0 0 By MS/MS 10 0 1 1 68.688 69.182 3 0.017211 78910 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.013 33.54 6607300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6607300 21903 2329 20000 183887 146541 146541 0 HNDDEQYAWESSAGGSFTVR Unmodified 2254.9516 0.95155284 862;850 P07900;Q14568;P08238 HSP90AA1;HSP90AA2P;HSP90AB1 Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2;Heat shock protein HSP 90-beta no no 0 0 0 By MS/MS 2 0 1 1 75.881 67.75 3 6.1835E-10 89435 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.983 88.307 15771000 15771000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21904 850;862 20001 183888 146542;146543 146543 2 HNDDEQYAWESSAGGSFTVRADHGEPIGR Unmodified 3187.398 0.39798093 862 P08238 HSP90AB1 Heat shock protein HSP 90-beta yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 74.426 68.183 4 7.0712E-91 88991 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 137.32 135.41 32573000 32573000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21905 862 20002 183889;183890 146544;146545 146545 2 HNDDEQYAWESSAGGSFTVRADHGEPIGRGTK Unmodified 3473.5621 0.56208614 862 P08238 HSP90AB1 Heat shock protein HSP 90-beta yes yes 0 0 2 By MS/MS By MS/MS 2.33 0.471 4 2 5 1 69.393 62.274 4;5 2.8873E-45 85083 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.244 95.079 194810000 192660000 2149900 0 0 0 0 0 0 0 0 0 0 0 0 0 21906 862 20003 183891;183892;183893;183894;183895;183896 146546;146547;146548;146549;146550;146551;146552;146553 146549 7 HNDDEQYAWESSAGGSFTVRTDTGEPMGRGTK Oxidation (M) 3501.5128 0.51275269 850 P07900 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 0 1 2 By MS/MS 2.25 0.433 3 1 4 69.953 62.486 4;5 2.2986E-27 82816 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.906 73.195 125110000 125110000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21907 850 20004 183897;183898;183899;183900 146554;146555;146556;146557;146558 146556 1070 4 HNDDEQYAWESSAGGSFTVRTDTGEPMGRGTK Unmodified 3485.5178 0.51783807 850 P07900 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 0 0 2 By MS/MS 2.2 0.4 4 1 5 70.19 62.612 4;5 1.0493E-46 67220 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 100.06 98.457 160600000 160600000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21908 850 20004 183901;183902;183903;183904;183905 146559;146560;146561;146562;146563;146564;146565;146566 146559 8 HNDLDDVGK Unmodified 1011.4621 0.46213773 1578 P49588 AARS Alanine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.62 3.84 5 2 9 1 5 1 1 1 1 1 1 1 1 1 1 15.964 13.886 2 7.243E-12 18330 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 204.79 145.81 3585000000 394910000 2969300000 49372000 0 0 0 0 0 14581000 0 36857000 0 0 36147000 83787000 21909 1578 20005 183906;183907;183908;183909;183910;183911;183912;183913;183914;183915;183916;183917;183918;183919;183920;183921 146567;146568;146569;146570;146571;146572;146573;146574;146575;146576;146577;146578;146579;146580;146581;146582;146583;146584;146585;146586 146574 18 HNEFDFISGTR Unmodified 1321.6051 0.60511357 642 O95340 PAPSS2 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 63.675 63.972 3 0.001793 72244 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.116 43.822 20966000 0 0 0 0 0 4392600 0 0 0 0 0 4907700 0 4192800 7473100 21910 642 20006 183922;183923;183924;183925 146587;146588;146589 146588 3 HNELTGDNVGPLILK Unmodified 1618.8679 0.8678702 3349 Q8N5K1 CISD2 CDGSH iron-sulfur domain-containing protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 77.054 74.364 3 0.02887 90471 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 30.739 16.907 4292600 0 0 4292600 0 0 0 0 0 0 0 0 0 0 0 0 21911 3349 20007 183926 146590 146590 1 HNESVVK Unmodified 811.41882 0.41881635 161 O00487 PSMD14 26S proteasome non-ATPase regulatory subunit 14 yes yes 0 0 0 By MS/MS 3 0 1 1 2.9294 -0.45014 2 0.021948 1688 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 108.46 53.936 18094000 0 18094000 0 0 0 0 0 0 0 0 0 0 0 0 0 21912 161 20008 183927 146591;146592;146593;146594 146591 4 HNFQGIEK Unmodified 971.48248 0.48247924 3909 Q96KP1 EXOC2 Exocyst complex component 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 23.081 19.14 2 0.0060667 25820 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 139.97 92.055 197110000 141800000 23945000 31371000 0 0 0 0 0 0 0 0 0 0 0 0 21913 3909 20009 183928;183929;183930;183931 146595;146596;146597;146598;146599 146596 4 HNGAAEPEPEAETAR Unmodified 1577.707 0.70701246 5182 Q9Y446 PKP3 Plakophilin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 16.119 16.267 3 0.0080396 16097 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 47.639 40.184 79335000 0 0 0 5315500 0 7557700 7187100 7837100 5880500 6877600 0 18787000 9339700 10553000 0 21914 5182 20010 183932;183933;183934;183935;183936;183937;183938;183939;183940 146600;146601;146602;146603;146604 146602 2 HNGPNDASDGTVR Unmodified 1338.5913 0.59125442 1308 P31942 HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 18 1 2 2 2 1 1 2 2 1 1 1 2 7.1807 7.3027 2;3 1.8413E-51 4704 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 182.92 172.39 332790000 0 0 0 4468800 16977000 19745000 29151000 9730000 10713000 42230000 76796000 14796000 11238000 14580000 82368000 21915 1308 20011 183941;183942;183943;183944;183945;183946;183947;183948;183949;183950;183951;183952;183953;183954;183955;183956;183957;183958 146605;146606;146607;146608;146609;146610;146611;146612;146613;146614;146615;146616;146617;146618 146609 11 HNGVGGSPPK Unmodified 948.47773 0.47772821 3994 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a yes yes 0 0 0 By matching By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 7.1262 4.0426 2 0.0023793 6052 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 105.52 70.32 74666000 25632000 29747000 19288000 0 0 0 0 0 0 0 0 0 0 0 0 21916 3994 20012 183959;183960;183961;183962 146619;146620 146620 2 HNIAGTTHSGAEK Unmodified 1321.6375 0.63747633 2113 Q05209 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 5.7325 5.8499 3 0.00034519 3290 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 85.536 65.894 98021000 0 0 0 6949300 8216700 7747800 10696000 7836000 7163400 8178300 7219500 10350000 7692100 6027700 9944300 21917 2113 20013 183963;183964;183965;183966;183967;183968;183969;183970;183971;183972;183973;183974 146621;146622;146623;146624;146625;146626;146627 146627 7 HNIICLQNDHK Unmodified 1390.6776 0.67756701 131 O00233 PSMD9 26S proteasome non-ATPase regulatory subunit 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 29.394 29.648 3 0.00022933 30419 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.182 70 149710000 0 0 0 11260000 0 8427300 0 0 12817000 6846700 0 31834000 16085000 22060000 40376000 21918 131 20014 183975;183976;183977;183978;183979;183980;183981;183982 146628;146629;146630;146631;146632 146629 4 HNIQALLK Unmodified 935.55525 0.55525025 927 P10644 PRKAR1A cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41.17 40.487 2 0.0052431 44481 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 107.59 32.404 504520000 210470000 0 17157000 7008900 7887500 29460000 13571000 15290000 12654000 27193000 32539000 31287000 23080000 29959000 46959000 21919 927 20015 183983;183984;183985;183986;183987;183988;183989;183990;183991;183992;183993;183994;183995;183996 146633;146634;146635;146636;146637;146638;146639;146640;146641;146642;146643;146644;146645;146646;146647;146648 146634 16 HNIQFSSFDIFSDEEVRQGLK Unmodified 2495.2081 0.20810188 570 O76003 GLRX3 Glutaredoxin-3 yes yes 0 0 1 By MS/MS 2 0 1 1 92.23 84.099 3 3.317E-05 109072 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.784 58.451 5209500 5209500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21920 570 20016 183997 146649 146649 1 HNIRLMGEDEK Unmodified 1340.6507 0.65068356 4910 Q9UHV9 PFDN2 Prefoldin subunit 2 yes yes 0 0 1 By MS/MS 2 0 1 1 35.534 29.186 3 0.018881 41037 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.695 36.737 48915000 48915000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21921 4910 20017 183998 146650 146650 0 HNIRLMGEDEK Oxidation (M) 1356.6456 0.64559818 4910 Q9UHV9 PFDN2 Prefoldin subunit 2 yes yes 0 1 1 By MS/MS 2 0 1 1 20.834 16.11 2 0.017486 23229 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.05 47.452 33643000 33643000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21922 4910 20017 183999 146651 146651 6264 0 HNIVDETLK Unmodified 1067.5611 0.56112349 3458 Q8NHP6 MOSPD2 Motile sperm domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 38.799 38.965 2 0.0037823 42931 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 88.948 44.501 56604000 0 0 0 3375600 3539500 0 8873500 0 3140600 3355700 8351800 10870000 0 0 15097000 21923 3458 20018 184000;184001;184002;184003;184004;184005;184006;184007;184008 146652;146653;146654;146655;146656 146654 5 HNLCGETEEEK Unmodified 1344.5616 0.56159378 1503 P46439;Q03013;P09488 GSTM5;GSTM4;GSTM1 Glutathione S-transferase Mu 5;Glutathione S-transferase Mu 4;Glutathione S-transferase Mu 1 yes no 0 0 0 By MS/MS 2.5 0.5 1 1 2 12.351 9.0082 2 4.495E-10 12293 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 149.94 133.74 10581000 0 10581000 0 0 0 0 0 0 0 0 0 0 0 0 0 21924 1503 20019 184009;184010 146657 146657 1 HNLDVVSPIPANK Unmodified 1402.7569 0.75686319 2224 Q13017 ARHGAP5 Rho GTPase-activating protein 5 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 59.624 54.773 2;3 0.00062935 71165 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 59.796 49.744 35409000 0 31446000 3962300 0 0 0 0 0 0 0 0 0 0 0 0 21925 2224 20020 184011;184012 146658;146659;146660 146659 3 HNLLASK Unmodified 781.44464 0.44463717 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 16.391 13.025 2 0.011921 19568 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 142.64 17.56 955850000 716810000 76183000 162850000 0 0 0 0 0 0 0 0 0 0 0 0 21926 2047 20021 184013;184014;184015 146661;146662;146663 146662 3 HNLLQACK Unmodified 982.50183 0.50183448 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 20.045 20.316 2 0.0040192 20840 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 146.21 116.63 48802000 0 0 0 0 5956900 0 5105600 2394800 0 6716600 5142100 5909600 5431400 4735200 7409400 21927 2431 20022 184016;184017;184018;184019;184020;184021;184022;184023;184024;184025;184026 146664;146665;146666;146667;146668;146669;146670;146671;146672 146665 9 HNLSLNECFVK Unmodified 1359.6605 0.66051996 2212;4073 Q12948;O43638;Q99958 FOXC1;FOXS1;FOXC2 Forkhead box protein C1;Forkhead box protein S1;Forkhead box protein C2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 56.149 56.463 2 0.00091472 63617 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 81.525 2.3765 19998000 0 0 0 0 0 0 0 0 0 4699200 0 11057000 0 4241900 0 21928 2212;4073 20023 184027;184028;184029;184030;184031 146673;146674;146675;146676 146676 4 HNLSLNK Unmodified 824.45045 0.45045083 4793;5062;148 Q9UPW0;Q92949;P55316;Q96NZ1;O15353;Q9P0K8;O00409 FOXJ3;FOXJ1;FOXG1;FOXN4;FOXN1;FOXJ2;FOXN3 Forkhead box protein J3;Forkhead box protein J1;Forkhead box protein G1;Forkhead box protein N4;Forkhead box protein N1;Forkhead box protein J2;Forkhead box protein N3 no no 0 0 0 By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.932 13.088 2 0.023406 12300 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 86.833 15.49 136090000 0 0 0 10000000 10976000 9028200 9712300 12468000 10011000 15020000 15358000 5796100 19171000 10666000 7885100 21929 5062;4793;148 20024 184032;184033;184034;184035;184036;184037;184038;184039;184040;184041;184042;184043 146677;146678;146679;146680 146678 3 HNLSLNR Unmodified 852.4566 0.45659884 2019;2051 P85037;Q01167 FOXK1;FOXK2 Forkhead box protein K1;Forkhead box protein K2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.632 15.802 2 0.023433 15179 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 85.357 7.3724 158380000 0 0 0 9146700 6994600 7030900 7970100 6909500 5822100 11508000 18685000 28635000 16759000 14839000 24080000 21930 2019;2051 20025 184044;184045;184046;184047;184048;184049;184050;184051;184052;184053;184054;184055 146681;146682 146682 2 HNMCGETEEEK Unmodified 1362.518 0.5180144 1120 P21266 GSTM3 Glutathione S-transferase Mu 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.91 3.42 4 2 16 2 3 1 1 1 1 1 1 2 2 2 1 1 1 2 7.1335 6.3669 2;3 0 4255 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 275.84 275.84 679980000 32473000 557850000 8276900 1436300 1963700 1395400 1483900 2363800 2284500 4798900 14538000 6644500 5217200 7162900 32090000 21931 1120 20026 184056;184057;184058;184059;184060;184061;184062;184063;184064;184065;184066;184067;184068;184069;184070;184071;184072;184073;184074;184075;184076;184077 146683;146684;146685;146686;146687;146688;146689;146690;146691;146692;146693;146694;146695;146696 146685 13 HNMCGETEEEK Oxidation (M) 1378.5129 0.51292903 1120 P21266 GSTM3 Glutathione S-transferase Mu 3 yes yes 0 1 0 By MS/MS By MS/MS 2.33 0.471 4 2 1 5 5.5604 2.2443 2;3 1.071E-82 5132 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 229.53 229.53 1930700000 96896000 1833800000 0 0 0 0 0 0 0 0 0 0 0 0 0 21932 1120 20026 184078;184079;184080;184081;184082;184083 146697;146698;146699;146700;146701;146702 146702 1607 5 HNMDIGTWDNK Unmodified 1329.5772 0.57718426 5227;4251 Q9BYJ9;Q9Y5A9 YTHDF1;YTHDF2 YTH domain-containing family protein 1;YTH domain-containing family protein 2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 44.306 44.693 2 0.0095141 48916 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.452 27.023 41291000 0 0 0 0 0 0 0 0 0 9771800 0 0 0 9950700 21569000 21933 4251;5227 20027 184084;184085;184086;184087 146703;146704;146705 146704 3 HNMNIGTWDEK Oxidation (M) 1359.5877 0.58774895 3120 Q7Z739 YTHDF3 YTH domain-containing family protein 3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 2 20 1 1 1 1 2 2 2 2 2 2 2 2 2 30.387 30.244 2;3 1.0846E-05 31284 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 134.2 106.9 209950000 0 8851300 7640000 7158600 5430200 10604000 18359000 12107000 14372000 0 28826000 21328000 22772000 18375000 34127000 21934 3120 20028 184088;184089;184090;184091;184092;184093;184094;184095;184096;184097;184098;184099;184100;184101;184102;184103;184104;184105;184106;184107;184108;184109 146706;146707;146708;146709;146710;146711;146712;146713;146714;146715;146716;146717;146718;146719;146720;146721 146710 4744 13 HNMNIGTWDEK Unmodified 1343.5928 0.59283433 3120 Q7Z739 YTHDF3 YTH domain-containing family protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 43.983 44.313 2 0.0005162 49715 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 99.343 83.728 92671000 0 0 0 0 0 14854000 0 0 8969200 0 16079000 0 0 18433000 34337000 21935 3120 20028 184110;184111;184112;184113;184114 146722;146723;146724 146722 3 HNMSGGEFQGK Unmodified 1190.5139 0.51385572 2558 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 13.646 13.495 2 0.00036142 12644 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 116.52 94.432 21325000 0 0 5358600 0 0 0 1884400 1701000 0 0 3411400 4171200 0 0 4798900 21936 2558 20029 184115;184116;184117;184118;184119;184120 146725;146726;146727 146727 3 HNMSGGEFQGK Oxidation (M) 1206.5088 0.50877035 2558 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 0 1 0 By matching By MS/MS 2 0 2 1 1 7.75 4.8789 2 0.016299 7068 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 59.908 46.871 10667000 4388100 0 6278500 0 0 0 0 0 0 0 0 0 0 0 0 21937 2558 20029 184121;184122 146728 146728 4212 1 HNNLYLVATSK Unmodified 1258.667 0.66698555 4232 Q9BXS5 AP1M1 AP-1 complex subunit mu-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.29 0.452 5 2 3 2 2 51.721 45.999 2;3 3.5506E-09 63510 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 140.07 112.77 230910000 174550000 19889000 36476000 0 0 0 0 0 0 0 0 0 0 0 0 21938 4232 20030 184123;184124;184125;184126;184127;184128;184129 146729;146730;146731;146732;146733;146734;146735;146736;146737;146738 146733 9 HNNQQALSHSIEEGLK Unmodified 1803.8864 0.88637381 4014 Q99496 RNF2 E3 ubiquitin-protein ligase RING2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 44.074 43.145 3 1.3327E-66 61819 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 189.81 177.79 121810000 43842000 0 14193000 0 0 6747000 0 4151800 6021400 6074600 0 9226200 10440000 6227700 14883000 21939 4014 20031 184130;184131;184132;184133;184134;184135;184136;184137;184138;184139 146739;146740;146741;146742;146743;146744;146745;146746 146742 8 HNPGEDEYEK Unmodified 1216.4996 0.49964545 178 O00750 PIK3C2B Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit beta yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 9.0021 8.5823 2 0.00075053 10207 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.97 104.5 53279000 0 37876000 0 377060 1004800 1348700 1274400 476240 803790 1394200 0 3341600 1404100 1356400 2621600 21940 178 20032 184140;184141;184142;184143;184144;184145;184146;184147;184148;184149;184150;184151;184152 146747;146748;146749;146750;146751 146747 5 HNPGKPGEGTPISSR Unmodified 1532.7696 0.76955314 4888 Q9UGR2 ZC3H7B Zinc finger CCCH domain-containing protein 7B yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.581 14.745 3 4.0704E-12 13351 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.497 72.751 192910000 0 0 0 11620000 6362600 12815000 10656000 9885200 12774000 19091000 21522000 18279000 18250000 19460000 32199000 21941 4888 20033 184153;184154;184155;184156;184157;184158;184159;184160;184161;184162;184163;184164 146752;146753;146754;146755;146756;146757;146758;146759;146760;146761 146755 10 HNPTNTIVCK Unmodified 1182.5815 0.58154136 4223 Q9BXB5 OSBPL10 Oxysterol-binding protein-related protein 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 20.704 16.993 2 0.0048548 24047 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.639 66.339 65745000 38590000 14515000 12640000 0 0 0 0 0 0 0 0 0 0 0 0 21942 4223 20034 184165;184166;184167 146762;146763;146764 146763 3 HNPTVTGHQEQTYLQK Unmodified 1879.9177 0.91767394 3029 Q71RC2 LARP4 La-related protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 1 2 2 2 2 1 2 2 2 2 27.267 27.461 3;4 2.3155E-24 29376 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 117 111.82 232430000 0 0 0 10804000 9233700 16078000 18035000 14444000 14377000 24231000 22994000 27987000 22554000 16399000 35288000 21943 3029 20035 184168;184169;184170;184171;184172;184173;184174;184175;184176;184177;184178;184179;184180;184181;184182;184183;184184;184185;184186;184187;184188;184189 146765;146766;146767;146768;146769;146770;146771;146772;146773;146774;146775;146776;146777;146778;146779 146773 15 HNPVFGVMS Oxidation (M) 1002.4593 0.45930096 1835 P61158;Q9P1U1 ACTR3;ACTR3B Actin-related protein 3;Actin-related protein 3B yes no 0 1 0 By MS/MS 2 0 1 1 50.419 42.519 2 0.026071 58770 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.682 46.127 13828000 13828000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21944 1835 20036 184190 146780 146780 2975 1 HNQIITEETGSAVEPSDEIK Unmodified 2196.0546 0.054620931 2830 Q5VZ89 DENND4C DENN domain-containing protein 4C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.12 2.45 2 1 23 2 1 1 2 2 2 2 2 2 2 2 2 2 2 55.907 55.494 2;3 6.9043E-47 62825 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 89.831 81.44 369200000 0 40056000 3384000 15699000 19616000 21136000 26047000 30655000 18419000 26823000 30743000 41257000 25107000 24782000 45474000 21945 2830 20037 184191;184192;184193;184194;184195;184196;184197;184198;184199;184200;184201;184202;184203;184204;184205;184206;184207;184208;184209;184210;184211;184212;184213;184214;184215;184216 146781;146782;146783;146784;146785;146786;146787;146788;146789;146790;146791;146792;146793;146794;146795;146796;146797;146798;146799;146800;146801;146802;146803 146784 23 HNQLPLVIEFTEQTAPK Unmodified 1964.0367 0.036726442 838 P07237 P4HB Protein disulfide-isomerase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 4.62 3.61 7 2 4 4 4 1 1 1 1 1 90.545 86.873 2;3 2.0604E-54 113992 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 150.39 144.96 2157700000 1322900000 747870000 26357000 0 0 0 0 0 0 4289600 0 8987000 0 5470100 41830000 21946 838 20038 184217;184218;184219;184220;184221;184222;184223;184224;184225;184226;184227;184228;184229 146804;146805;146806;146807;146808;146809;146810;146811;146812;146813;146814;146815;146816;146817;146818;146819;146820;146821;146822;146823;146824;146825;146826;146827 146810 23 HNSEKPPEPVKPEVK Unmodified 1713.905 0.90498399 4896 Q9UHD1 CHORDC1 Cysteine and histidine-rich domain-containing protein 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 1 2 2 2 1 1 22.067 22.371 3;4 0.0026411 22843 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 57.148 46.722 299880000 0 0 0 6815300 0 24092000 8859500 10653000 5813800 36124000 59730000 46048000 35534000 26033000 40180000 21947 4896 20039 184230;184231;184232;184233;184234;184235;184236;184237;184238;184239;184240;184241;184242;184243 146828;146829;146830;146831;146832;146833;146834 146832 3 HNSSGSILFLGR Unmodified 1286.6731 0.67313356 1289 P30740 SERPINB1 Leukocyte elastase inhibitor yes yes 0 0 0 By MS/MS 10 0 2 2 64.511 65.063 2;3 0.014872 73617 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 26.703 17.748 25366000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25366000 21948 1289 20040 184244;184245 146835;146836 146835 2 HNSVEDSVTK Unmodified 1114.5255 0.52546627 412 O60563 CCNT1 Cyclin-T1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 11.783 11.068 2 1.9101E-32 9124 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 183.57 130.02 542020000 9530400 271890000 122510000 11353000 6552600 10451000 10630000 8473100 10454000 14431000 11810000 10781000 17708000 15918000 9523400 21949 412 20041 184246;184247;184248;184249;184250;184251;184252;184253;184254;184255;184256;184257;184258;184259;184260;184261 146837;146838;146839;146840;146841;146842;146843;146844;146845;146846;146847;146848;146849;146850;146851;146852 146841 16 HNTAVSQLTK Unmodified 1097.5829 0.58292157 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17.468 17.066 2 2.4539E-08 26343 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 154.84 102.99 354990000 35715000 0 9275600 12819000 16245000 23784000 32492000 15930000 13703000 28510000 31582000 40494000 24979000 25440000 44018000 21950 4634 20042 184262;184263;184264;184265;184266;184267;184268;184269;184270;184271;184272;184273;184274;184275;184276 146853;146854;146855;146856;146857;146858;146859;146860;146861;146862;146863;146864 146857 11 HNTGTDFSNSSTK Unmodified 1394.6062 0.60623578 3893 Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.12 3.72 2 1 5 2 1 1 1 1 1 1 9.9856 8.9641 3 0.00063195 11412 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.136 58.436 71710000 0 53242000 3245000 0 0 2332800 3440000 0 0 1582700 0 3945300 0 0 3921300 21951 3893 20043 184277;184278;184279;184280;184281;184282;184283;184284 146865;146866;146867;146868 146866 4 HNVEVLGILSDDVETDTVAPGENLK Unmodified 2663.329 0.32900488 1014 P15170 GSPT1 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 6 2 5 2 1 90.227 84.397 3;4 9.2297E-38 105838 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 84.933 77.399 415960000 257740000 124620000 33603000 0 0 0 0 0 0 0 0 0 0 0 0 21952 1014 20044 184285;184286;184287;184288;184289;184290;184291;184292 146869;146870;146871;146872;146873;146874;146875;146876;146877;146878;146879 146879 10 HNVHSPYK Unmodified 980.48281 0.48281359 3897 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 8.4006 4.762 2 0.012162 8205 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 103.8 74.655 31034000 31034000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21953 3897 20045 184293 146880 146880 1 HNVPDDGLPLQSQQLPQSGK Unmodified 2157.0814 0.081444804 4834 Q9UBB9 TFIP11 Tuftelin-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS 6.5 3.5 1 1 1 1 65.431 60.704 3 2.4043E-08 69189 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.966 48.044 6128900 0 6128900 0 0 0 0 0 0 0 0 0 0 0 0 0 21954 4834 20046 184294;184295 146881;146882 146881 1 HNVQTLDIISR Unmodified 1294.6993 0.69934831 2124 Q06203 PPAT Amidophosphoribosyltransferase yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 52.333 52.623 2 0.005608 59295 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 58.63 29.213 56676000 0 0 0 0 0 4801800 2163100 2109100 2023500 5213700 8958100 7292300 3740200 4921500 15452000 21955 2124 20047 184296;184297;184298;184299;184300;184301;184302;184303;184304;184305 146883;146884;146885;146886;146887;146888 146886 6 HNYEGTLR Unmodified 988.47264 0.47264284 3702 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 13.94 14.136 2 0.020537 12801 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.717 19.944 8802400 0 0 0 0 0 2596700 0 0 0 0 0 0 0 0 6205800 21956 3702 20048 184306;184307 146889 146889 1 HPAGQQLDEFLQLAVDK Unmodified 1907.9741 0.97412619 4001 Q96T76 MMS19 MMS19 nucleotide excision repair protein homolog yes yes 0 0 0 By MS/MS 2 0 1 1 95.193 90.328 3 0.00021885 112026 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.514 70.099 16074000 0 16074000 0 0 0 0 0 0 0 0 0 0 0 0 0 21957 4001 20049 184308 146890 146890 1 HPAKPDPSGECNPDLR Unmodified 1788.8213 0.82133071 2615 Q16576 RBBP7 Histone-binding protein RBBP7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 22.255 22.46 3;4 6.7963E-99 23271 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 185.74 167.64 2994400000 0 0 0 106180000 84910000 156710000 107650000 120910000 115010000 284940000 419480000 527330000 291840000 316100000 463350000 21958 2615 20050 184309;184310;184311;184312;184313;184314;184315;184316;184317;184318;184319;184320;184321;184322;184323;184324;184325;184326;184327;184328;184329;184330;184331;184332 146891;146892;146893;146894;146895;146896;146897;146898;146899;146900;146901;146902;146903;146904;146905;146906;146907;146908;146909;146910;146911;146912;146913;146914;146915;146916;146917 146893 16 HPAPEDPDWIK Unmodified 1303.6197 0.619701 4973 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 47 47.176 2 0.0002908 53094 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 93.598 70.169 78110000 0 0 0 4732800 3261300 8736200 0 0 3852100 9290700 7640800 8045500 11230000 5848200 15472000 21959 4973 20051 184333;184334;184335;184336;184337;184338;184339;184340;184341;184342;184343 146918;146919;146920;146921;146922;146923;146924;146925;146926;146927 146918 9 HPAPPPSNYEILVK Unmodified 1560.83 0.83002813 5110 Q9Y2L1 DIS3 Exosome complex exonuclease RRP44 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 2 3 2 67.832 62.034 2;3 8.1853E-34 76271 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 164.65 145.87 497170000 304260000 79648000 113260000 0 0 0 0 0 0 0 0 0 0 0 0 21960 5110 20052 184344;184345;184346;184347;184348;184349;184350 146928;146929;146930;146931;146932;146933;146934;146935;146936 146936 9 HPASLTSSGSSGSPSSSIK Unmodified 1772.8541 0.85407063 4288 Q9C0D5 TANC1 Protein TANC1 yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 26.04 26.165 3 0.033265 27370 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 14.89 7.1093 15254000 0 0 0 0 2254900 3644400 0 2453600 2003800 0 0 4896700 0 0 0 21961 4288 20053 184351;184352;184353;184354;184355 146937 146937 1 HPDADSLYVEK Unmodified 1272.5986 0.59863121 1740 P54577 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.67 3.86 7 2 12 2 5 2 1 1 1 1 1 1 1 1 1 1 1 1 36.653 34.777 2;3 7.0351E-19 44556 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 180.67 126.52 1021800000 121070000 624900000 61703000 6641500 4086300 17368000 8650100 7372100 7128500 12476000 22706000 25096000 18541000 18555000 65557000 21962 1740 20054 184356;184357;184358;184359;184360;184361;184362;184363;184364;184365;184366;184367;184368;184369;184370;184371;184372;184373;184374;184375;184376 146938;146939;146940;146941;146942;146943;146944;146945;146946;146947;146948;146949;146950;146951;146952;146953;146954;146955;146956;146957;146958;146959;146960;146961;146962;146963;146964;146965 146942 26 HPDASVNFSEFSK Unmodified 1463.6681 0.66810776 883 P09429 HMGB1 High mobility group protein B1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.59 1 7 4 27 4 5 3 2 1 3 3 1 3 3 2 2 3 2 2 59.84 58.621 2;3 2.1112E-25 95515 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 122.34 84.166 5034600000 281610000 2581000000 1481000000 25708000 25637000 67746000 51504000 29327000 55540000 49045000 97895000 57474000 48102000 46686000 136340000 21963 883 20055 184377;184378;184379;184380;184381;184382;184383;184384;184385;184386;184387;184388;184389;184390;184391;184392;184393;184394;184395;184396;184397;184398;184399;184400;184401;184402;184403;184404;184405;184406;184407;184408;184409;184410;184411;184412;184413;184414;184415 146966;146967;146968;146969;146970;146971;146972;146973;146974;146975;146976;146977;146978;146979;146980;146981;146982;146983;146984;146985;146986;146987;146988;146989;146990;146991;146992;146993;146994;146995;146996;146997;146998;146999;147000;147001;147002;147003;147004;147005;147006;147007;147008 146987 36 HPDDEMMK Oxidation (M) 1017.3896 0.38956641 536 O75718 CRTAP Cartilage-associated protein yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 6.564 3.2623 2 0.010543 5284 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.41 83.047 33593000 0 33593000 0 0 0 0 0 0 0 0 0 0 0 0 0 21964 536 20056 184416;184417 147009 147009 702 1 HPDEDAVEAEGHEVK Unmodified 1660.7329 0.73289286 4736 Q9NY27 PPP4R2 Serine/threonine-protein phosphatase 4 regulatory subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.42 3.66 3 1 8 1 2 1 1 1 1 1 1 1 1 1 25.606 24.26 3 7.6673E-19 33495 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 113.37 108.89 250200000 85816000 84081000 25122000 0 0 0 5038100 0 5851100 6810700 7070700 7115800 0 6916100 16379000 21965 4736 20057 184418;184419;184420;184421;184422;184423;184424;184425;184426;184427;184428;184429 147010;147011;147012;147013;147014;147015;147016;147017;147018;147019;147020;147021 147016 10 HPDIEAQER Unmodified 1093.5152 0.51523593 1539 P48449 LSS Lanosterol synthase yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.327 14.489 2 0.014773 13790 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 57.96 21.565 63777000 0 0 0 3740100 4463200 4243300 3227200 6049700 2552200 5749200 7617900 6938400 6871600 4731300 7592800 21966 1539 20058 184430;184431;184432;184433;184434;184435;184436;184437;184438;184439;184440;184441 147022;147023;147024;147025;147026;147027;147028 147022 7 HPDIYAVPIK Unmodified 1151.6339 0.63389451 4867 Q9UDY2 TJP2 Tight junction protein ZO-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 3 6 1 1 1 1 1 1 1 1 1 59.454 57.532 2 0.0036679 63468 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.819 88.819 147040000 34639000 27233000 52842000 0 2672500 5612100 3792300 0 0 0 0 0 6317200 5369600 8562200 21967 4867 20059 184442;184443;184444;184445;184446;184447;184448;184449;184450 147029;147030;147031;147032;147033 147031 5 HPDSSVNFAEFSK Unmodified 1463.6681 0.66810776 1207 P26583 HMGB2 High mobility group protein B2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.38 3.72 7 1 16 3 3 2 1 1 1 1 1 1 1 2 2 1 2 2 57.688 56.134 2;3 1.7162E-92 73662 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 236.34 92.731 1235400000 69724000 550600000 461810000 4937700 3794800 5125500 5776300 5066800 4317400 6665000 21963000 29509000 3119900 14236000 48798000 21968 1207 20060 184451;184452;184453;184454;184455;184456;184457;184458;184459;184460;184461;184462;184463;184464;184465;184466;184467;184468;184469;184470;184471;184472;184473;184474 147034;147035;147036;147037;147038;147039;147040;147041;147042;147043;147044;147045;147046;147047;147048;147049;147050;147051;147052;147053 147035 16 HPDVEVDGFSELR Unmodified 1498.7052 0.70522155 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 66.015 66.367 3 0.0048694 75255 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 30.867 25.373 20330000 0 0 0 0 0 0 0 0 0 0 3514000 0 0 5238000 11578000 21969 894 20061 184475;184476;184477 147054;147055;147056 147054 2 HPDYAILAAR Unmodified 1125.5931 0.59309232 1171 P23921 RRM1 Ribonucleoside-diphosphate reductase large subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.55 49.706 2 9.957E-06 56156 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 147.04 124.55 644520000 0 0 0 29628000 20527000 77788000 43982000 34498000 32392000 57103000 54130000 73473000 51641000 45642000 123720000 21970 1171 20062 184478;184479;184480;184481;184482;184483;184484;184485;184486;184487;184488;184489 147057;147058;147059;147060;147061;147062;147063;147064;147065;147066;147067;147068;147069;147070;147071;147072;147073;147074 147068 17 HPEAAQEIEVELELSK Unmodified 1820.9156 0.91560825 3813 Q96EK5 KIAA1279 KIF1-binding protein yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 82.107 76.179 3 2.0575E-05 77654 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 84.842 73.798 14270000 14270000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21971 3813 20063 184490;184491 147075;147076 147075 2 HPEAEMAQNSVR Oxidation (M) 1383.6201 0.62011171 1010 P14923 JUP Junction plakoglobin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 28 3 2 3 3 3 2 2 1 2 3 2 2 9.9268 10.034 2;3 0.00065607 6559 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 63.473 54.96 328220000 0 0 0 93407000 10530000 21881000 19857000 77850000 6239400 9015800 13135000 29307000 31947000 7958300 7094200 21972 1010 20064 184492;184493;184494;184495;184496;184497;184498;184499;184500;184501;184502;184503;184504;184505;184506;184507;184508;184509;184510;184511;184512;184513;184514;184515;184516;184517;184518;184519 147077;147078;147079;147080;147081;147082;147083;147084;147085;147086;147087;147088;147089;147090;147091 147082 1395 7 HPEAEMAQNSVR Unmodified 1367.6252 0.62519709 1010 P14923 JUP Junction plakoglobin yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 2 1 1 1 2 1 1 1 1 1 1 19.225 19.409 2;3 3.1933E-20 19681 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 131.83 114.88 295090000 0 0 0 27314000 16412000 16887000 10829000 99247000 11148000 18719000 20333000 28843000 35275000 0 10078000 21973 1010 20064 184520;184521;184522;184523;184524;184525;184526;184527;184528;184529;184530;184531;184532 147092;147093;147094;147095;147096;147097;147098;147099;147100;147101;147102;147103 147101 11 HPELADK Unmodified 808.40792 0.40791731 1513 P46783;Q9NQ39 RPS10;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 8.0221 7.1319 2 1.9995E-16 8349 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 202.2 87.665 3298200000 158730000 1591700000 1387100000 0 16635000 14348000 16952000 16714000 14251000 17407000 0 21515000 19524000 0 23277000 21974 1513 20065 184533;184534;184535;184536;184537;184538;184539;184540;184541;184542;184543;184544;184545 147104;147105;147106;147107;147108;147109;147110;147111;147112;147113;147114 147106 9 HPELFEALGIAQPK Unmodified 1548.83 0.83002813 1876 P62195 PSMC5 26S protease regulatory subunit 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS 6.55 3.8 3 2 6 2 2 1 1 1 1 1 1 1 84.037 82.091 3 1.5851E-06 105037 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 103.88 97.462 208590000 51522000 127090000 1872800 0 0 3137300 0 2547500 0 6352300 4643200 4636500 0 0 6787800 21975 1876 20066 184546;184547;184548;184549;184550;184551;184552;184553;184554;184555;184556 147115;147116;147117;147118;147119;147120;147121;147122 147121 8 HPELNISEEGITK Unmodified 1465.7413 0.7412727 1053 P17480 UBTF Nucleolar transcription factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.16 5 2 26 1 4 2 2 2 2 3 2 2 3 2 2 2 2 2 53.698 52.683 2;3 3.8044E-62 57889 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 225.97 188.62 1117300000 10714000 166340000 134680000 48167000 46902000 85773000 48721000 55301000 41660000 68040000 81696000 134560000 69161000 52784000 72838000 21976 1053 20067 184557;184558;184559;184560;184561;184562;184563;184564;184565;184566;184567;184568;184569;184570;184571;184572;184573;184574;184575;184576;184577;184578;184579;184580;184581;184582;184583;184584;184585;184586;184587;184588;184589 147123;147124;147125;147126;147127;147128;147129;147130;147131;147132;147133;147134;147135;147136;147137;147138;147139;147140;147141;147142;147143;147144;147145;147146;147147;147148;147149;147150 147130 23 HPENYDLATLK Unmodified 1299.6459 0.64591575 1977 P78347 GTF2I General transcription factor II-I yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.38 3.71 6 1 14 2 3 2 1 1 1 1 1 1 2 1 1 1 1 2 48.225 46.199 2;3 4.6093E-09 61476 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 147.91 104.1 1360700000 37671000 775410000 291070000 17066000 16653000 18204000 19206000 16601000 14883000 24357000 22501000 24423000 26152000 27803000 28705000 21977 1977 20068 184590;184591;184592;184593;184594;184595;184596;184597;184598;184599;184600;184601;184602;184603;184604;184605;184606;184607;184608;184609;184610 147151;147152;147153;147154;147155;147156;147157;147158;147159;147160;147161;147162;147163;147164;147165;147166;147167 147153 14 HPESIQGSK Unmodified 981.48796 0.48795855 2840;5195 Q641Q2;Q9Y4E1 FAM21A;FAM21C WASH complex subunit FAM21A;WASH complex subunit FAM21C no no 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 6.848 3.5034 2 9.0032E-08 5024 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 195.88 126.97 213760000 22966000 190790000 0 0 0 0 0 0 0 0 0 0 0 0 0 21978 2840;5195 20069 184611;184612;184613 147168;147169;147170 147170 2 HPESNTAGMDIFAK Unmodified 1516.698 0.69802768 5270 Q9Y696 CLIC4 Chloride intracellular channel protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 4 1 1 2 62.429 56.995 3 0.0002484 69689 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 65.895 52.086 121960000 8349300 77285000 36327000 0 0 0 0 0 0 0 0 0 0 0 0 21979 5270 20070 184614;184615;184616;184617 147171;147172;147173 147173 3 HPESNTAGMDIFAK Oxidation (M) 1532.6929 0.6929423 5270 Q9Y696 CLIC4 Chloride intracellular channel protein 4 yes yes 0 1 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 40.76 36.617 3 0.00037128 46151 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 84.468 77.74 171440000 0 27736000 143700000 0 0 0 0 0 0 0 0 0 0 0 0 21980 5270 20070 184618;184619 147174;147175 147175 6676 1 HPEVLPAEK Unmodified 1018.5447 0.54474515 3791 Q96D71 REPS1 RalBP1-associated Eps domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 24.13 23.95 2 0.00067295 31441 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 128.36 83.026 50145000 0 0 30407000 2211300 1551800 1842300 2521000 1745400 1055100 1575500 2624700 0 2564300 2047400 0 21981 3791 20071 184620;184621;184622;184623;184624;184625;184626;184627;184628;184629;184630 147176;147177;147178;147179;147180 147180 5 HPEVQSILK Unmodified 1049.5869 0.58694431 117 O00141 SGK1 Serine/threonine-protein kinase Sgk1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42.535 41.42 2 0.003176 44144 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.906 25.654 157810000 29487000 17224000 9911400 5900400 6347100 7786200 6837900 7248400 5881100 10583000 11779000 14522000 10379000 0 13921000 21982 117 20072 184631;184632;184633;184634;184635;184636;184637;184638;184639;184640;184641;184642;184643;184644 147181;147182;147183;147184;147185;147186;147187;147188;147189;147190;147191;147192;147193;147194;147195 147185 13 HPFPCPTSYR Unmodified 1260.571 0.57097667 1039 P16435 POR NADPH--cytochrome P450 reductase yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 40.815 41.057 2 0.024932 44968 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 44.753 33.534 62977000 0 0 0 0 2791400 5076400 3794500 2674400 3529600 4706000 7785600 10933000 8429700 5736500 7520000 21983 1039 20073 184645;184646;184647;184648;184649;184650;184651;184652;184653;184654;184655 147196 147196 1 HPFPGPGLAIR Unmodified 1160.6455 0.64546224 1612 P49915 GMPS GMP synthase [glutamine-hydrolyzing] yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 62.081 62.237 2 0.0050825 69874 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.716 41.356 88852000 0 0 0 2446700 0 18130000 0 0 3676800 8848000 10527000 8317200 6322500 8398700 22186000 21984 1612 20074 184656;184657;184658;184659;184660;184661;184662;184663;184664 147197;147198;147199;147200;147201;147202;147203 147199 7 HPFSFPLENQAR Unmodified 1441.7102 0.71024735 4096 Q9BQG0 MYBBP1A Myb-binding protein 1A yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 67.272 67.511 3 0.025783 76747 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 34.768 26.664 7674700 0 0 0 0 0 1525200 0 0 0 0 0 0 0 0 6149500 21985 4096 20075 184665;184666 147204 147204 1 HPGDFGADAQGAMNK Unmodified 1514.6572 0.6572255 755 P02144 MB Myoglobin yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 37.691 33.492 3 0.0026852 42247 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 35.657 28.97 12973000 0 8749500 4223400 0 0 0 0 0 0 0 0 0 0 0 0 21986 755 20076 184667;184668 147205;147206;147207 147206 3 HPGHYAVYNLSPR Unmodified 1509.7477 0.74769548 234 O14976 GAK Cyclin-G-associated kinase yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 41.783 42.125 3 5.22E-07 45458 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.881 59.102 75511000 0 0 0 0 0 6408600 0 6140100 4701900 5891000 5443100 7920300 7879700 9862000 21265000 21987 234 20077 184669;184670;184671;184672;184673;184674;184675;184676;184677 147208;147209;147210;147211;147212;147213;147214;147215 147210 8 HPGPSDTVVFREK Unmodified 1467.747 0.74702678 2186 Q12774 ARHGEF5 Rho guanine nucleotide exchange factor 5 yes yes 0 0 1 By MS/MS 2 0 1 1 44.715 37.85 3 0.012811 51954 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 44.968 32.608 30647000 30647000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21988 2186 20078 184678 147216 147216 0 HPGQALSSEPWNFPDTK Unmodified 1909.8959 0.89587586 3974 Q96RS0 TGS1 Trimethylguanosine synthase yes yes 0 0 0 By MS/MS 2 0 1 1 78.8 70.67 3 3.8882E-05 92889 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.287 76.5 27361000 27361000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21989 3974 20079 184679 147217 147217 1 HPGSFDVVHVK Unmodified 1220.6302 0.63020611 1905 P62701;P22090 RPS4X;RPS4Y1 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 2 1 1 1 1 1 1 1 2 1 1 3 39.396 39.638 3 3.4303E-05 43895 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 100.82 89.606 1119800000 0 0 0 43761000 34313000 86877000 58875000 85759000 101200000 101470000 123340000 109700000 143050000 107890000 123600000 21990 1905 20080 184680;184681;184682;184683;184684;184685;184686;184687;184688;184689;184690;184691;184692;184693;184694;184695 147218;147219;147220;147221;147222;147223;147224;147225;147226;147227;147228;147229;147230;147231;147232;147233;147234;147235;147236 147228 18 HPIQPSLPGTTSGSLSSVPGAPAPPAASK Unmodified 2708.4133 0.41334363 3800 Q96DN6 MBD6 Methyl-CpG-binding domain protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 74.552 74.665 3 1.4653E-15 86180 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 56.783 50.279 75420000 0 0 0 0 5823300 5371000 6511900 9646400 0 8543300 8680800 9426100 0 7680300 13737000 21991 3800 20081 184696;184697;184698;184699;184700;184701;184702;184703;184704 147237;147238;147239;147240;147241;147242;147243;147244;147245 147244 9 HPISEELETPIK Unmodified 1391.7296 0.72964538 3621 Q92547 TOPBP1 DNA topoisomerase 2-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.57 2.95 2 2 17 2 2 1 1 2 2 1 1 1 2 2 1 2 1 53.151 52.48 2;3 3.2067E-10 57975 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 144.65 128.45 213750000 0 7756300 24003000 7205200 6026100 22867000 13532000 9611200 8214700 14963000 20816000 28711000 14539000 18269000 17237000 21992 3621 20082 184705;184706;184707;184708;184709;184710;184711;184712;184713;184714;184715;184716;184717;184718;184719;184720;184721;184722;184723;184724;184725 147246;147247;147248;147249;147250;147251;147252;147253;147254;147255;147256;147257;147258;147259;147260;147261;147262;147263 147258 15 HPLEGTHELR Unmodified 1187.6047 0.60471964 3243 Q8IWR0 ZC3H7A Zinc finger CCCH domain-containing protein 7A yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 16.441 16.826 3 0.0070804 15554 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.784 43.858 26293000 0 0 0 0 0 0 0 0 0 0 0 0 12360000 0 13933000 21993 3243 20083 184726;184727 147264;147265 147264 1 HPLLSSGGPQSPLR Unmodified 1444.7787 0.77866126 4801 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 50.183 50.04 3 0.0049937 57387 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 30.484 8.163 25122000 0 0 0 4814300 4807800 0 5269800 5569400 0 0 0 0 0 4661200 0 21994 4801 20084 184728;184729;184730;184731;184732;184733 147266;147267;147268;147269;147270 147269 5 HPMDLSTVK Oxidation (M) 1042.5117 0.51173046 1189;2493 P25440;Q15059 BRD2;BRD3 Bromodomain-containing protein 2;Bromodomain-containing protein 3 no no 0 1 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.6 3.67 3 7 1 1 1 1 1 1 1 1 1 1 16.317 15.363 2 0.006118 14847 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 67.169 28.207 91846000 7424200 32831000 27204000 0 2033600 2505500 3983500 0 0 3128000 4021100 0 0 4347800 4367100 21995 1189;2493 20085 184734;184735;184736;184737;184738;184739;184740;184741;184742;184743 147271;147272 147271 1720 2 HPMDLSTVK Unmodified 1026.5168 0.51681584 1189;2493 P25440;Q15059 BRD2;BRD3 Bromodomain-containing protein 2;Bromodomain-containing protein 3 no no 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 35.483 30.599 2 0.0054899 38271 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 141.52 68.482 123460000 11682000 76867000 34911000 0 0 0 0 0 0 0 0 0 0 0 0 21996 1189;2493 20085 184744;184745;184746 147273;147274 147274 1 HPMDMSTIK 2 Oxidation (M) 1090.4787 0.47871577 441 O60885 BRD4 Bromodomain-containing protein 4 yes yes 0 2 0 By matching By MS/MS 2 0 2 1 1 7.495 4.7576 2 0.016297 6556 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 84.498 65.767 30746000 0 14516000 16230000 0 0 0 0 0 0 0 0 0 0 0 0 21997 441 20086 184747;184748 147275 147275 562;563 1 HPMDMSTIK Unmodified 1058.4889 0.48888653 441 O60885 BRD4 Bromodomain-containing protein 4 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 28.594 29.048 2 0.036457 30339 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 45.68 26.203 27969000 0 0 0 0 0 0 0 0 0 0 7381500 0 6642400 5090200 8855100 21998 441 20086 184749;184750;184751;184752 147276 147276 1 HPMDTEVTK Oxidation (M) 1072.4859 0.48590964 613 O94973 AP2A2 AP-2 complex subunit alpha-2 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.24 2 1 10 2 1 1 1 1 1 1 1 1 1 1 1 6.4478 5.8445 2 0.0067092 6042 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.02 49.891 70201000 0 51327000 5334700 1447000 1100900 1261500 1152100 0 790360 1249100 0 1968600 1469200 1362800 1737200 21999 613 20087 184753;184754;184755;184756;184757;184758;184759;184760;184761;184762;184763;184764;184765 147277;147278;147279;147280 147277 752 4 HPMDTEVTK Unmodified 1056.491 0.49099502 613 O94973 AP2A2 AP-2 complex subunit alpha-2 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 14.535 11.488 2 0.0013866 15437 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 137.14 83.581 94048000 0 88054000 5994600 0 0 0 0 0 0 0 0 0 0 0 0 22000 613 20087 184766;184767;184768 147281;147282 147281 2 HPNEICVPMSVEFEELLK Oxidation (M) 2186.0388 0.038776632 2202 Q12874 SF3A3 Splicing factor 3A subunit 3 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 93.387 86.874 3 5.8548E-05 110004 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.081 55.748 46109000 14721000 31388000 0 0 0 0 0 0 0 0 0 0 0 0 0 22001 2202 20088 184769;184770 147283;147284 147283 3575 2 HPNEICVPMSVEFEELLK Unmodified 2170.0439 0.04386201 2202 Q12874 SF3A3 Splicing factor 3A subunit 3 yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 2 2 2 2 97.433 92.522 3 3.4889E-14 115957 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 108.96 95.644 122030000 94300000 27730000 0 0 0 0 0 0 0 0 0 0 0 0 0 22002 2202 20088 184771;184772;184773;184774 147285;147286;147287;147288 147288 4 HPNMMTDVVK Unmodified 1170.5525 0.55254942 4630 Q9NSV4 DIAPH3 Protein diaphanous homolog 3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 2 1 1 38.386 38.635 2 0.0021049 41919 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 91.087 54.386 99826000 0 0 0 0 5396100 8431200 5290500 7131500 6012800 8597000 10592000 9882800 11471000 9618200 17403000 22003 4630 20089 184775;184776;184777;184778;184779;184780;184781;184782;184783;184784;184785;184786 147289;147290;147291;147292;147293;147294;147295;147296 147295 4 HPNSIEYK Unmodified 986.48214 0.48214489 3057 Q7L7X3 TAOK1 Serine/threonine-protein kinase TAO1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 16.023 13.165 2 0.036424 16706 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 104.06 73.388 15899000 0 4217500 11682000 0 0 0 0 0 0 0 0 0 0 0 0 22004 3057 20090 184787;184788 147297 147297 0 HPNTIEYK Unmodified 1000.4978 0.49779495 4369 Q9H2K8 TAOK3 Serine/threonine-protein kinase TAO3 yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 18.097 15.113 2 0.023125 18906 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 82.75 27.309 27298000 0 16097000 11201000 0 0 0 0 0 0 0 0 0 0 0 0 22005 4369 20091 184789;184790 147298 147298 1 HPNVISLQK Unmodified 1034.5873 0.58727866 1566 P49336 CDK8 Cyclin-dependent kinase 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 32.869 33.128 2 0.0098768 35322 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 65.465 37.583 32693000 0 0 0 0 3443600 0 4832600 0 0 5707900 0 5537100 5055800 0 8116200 22006 1566 20092 184791;184792;184793;184794;184795;184796 147299;147300 147300 2 HPPAEPSRFISAPTK Unmodified 1633.8576 0.85763986 3395 Q8NBJ5 COLGALT1 Procollagen galactosyltransferase 1 yes yes 0 0 1 By MS/MS 2 0 1 1 52.108 44.093 3 0.0059147 60754 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.885 41.094 112550000 112550000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22007 3395 20093 184797 147301 147301 0 HPPAPAEPSSDLASK Unmodified 1502.7365 0.73652168 4817 Q9P2E9 RRBP1 Ribosome-binding protein 1 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 9 2.45 1 6 1 1 1 1 1 1 1 31.287 30.82 3 0.0012501 38146 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 76.588 55.731 39193000 0 14592000 0 0 2667000 0 4153400 0 5006500 0 4276300 0 3921300 0 4576500 22008 4817 20094 184798;184799;184800;184801;184802;184803;184804 147302;147303;147304 147302 1 HPPGDEIYRK Unmodified 1210.6095 0.60947067 635 O95251 KAT7 Histone acetyltransferase KAT7 yes yes 0 0 1 By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 6 1 1 1 1 1 1 16.269 16.427 3 0.0084416 15186 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 43.77 18.932 16246000 0 0 0 553420 0 1933000 1310200 0 0 3999300 0 6605900 0 0 1844000 22009 635 20095 184805;184806;184807;184808;184809;184810 147305 147305 1 HPQAEEIEK Unmodified 1079.5247 0.52473799 3666 Q92817 EVPL Envoplakin yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 11.534 10.922 2 0.0062365 13368 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 105.4 56.893 59008000 0 26184000 4362000 13470000 965200 1340500 1799200 2842500 680210 0 0 2174500 1182500 1443800 2562500 22010 3666 20096 184811;184812;184813;184814;184815;184816;184817;184818;184819;184820;184821;184822;184823;184824 147306;147307;147308;147309;147310;147311;147312 147309 6 HPQGTEVK Unmodified 894.45593 0.45593014 3245 Q8IWT0 ZBTB8OS Protein archease yes yes 0 0 0 By MS/MS 3 0 1 1 2.6161 -0.76346 2 0.048667 1629 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 67.032 34.562 3559700 0 3559700 0 0 0 0 0 0 0 0 0 0 0 0 0 22011 3245 20097 184825 147313 147313 1 HPQPFLR Unmodified 893.48717 0.48717069 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.335 28.53 2 0.02563 29726 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 80.377 32.135 499580000 0 0 0 18980000 21577000 48192000 34803000 27998000 23713000 44116000 64930000 45298000 47295000 44066000 78616000 22012 848 20098 184826;184827;184828;184829;184830;184831;184832;184833;184834;184835;184836;184837 147314;147315 147315 2 HPQPGAVELAAK Unmodified 1216.6564 0.65642086 1224 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.868 32.054 2 4.782E-06 35102 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 110.84 71.875 133330000 0 0 0 6856500 5993000 12032000 7544200 10051000 6416600 13533000 11901000 17849000 12098000 11488000 17566000 22013 1224 20099 184838;184839;184840;184841;184842;184843;184844;184845;184846;184847;184848;184849 147316;147317;147318;147319;147320;147321;147322;147323;147324;147325;147326;147327;147328 147316 13 HPSAVTACNLDLENLVTDSNR Unmodified 2325.1019 0.10192225 5267 Q9Y678 COPG1 Coatomer subunit gamma-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 79.789 79.886 3 6.552E-16 92533 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 90.22 82.132 99144000 0 0 0 0 2501400 8420100 0 6220700 4365100 14167000 10544000 10307000 3894300 7398100 31326000 22014 5267 20100 184850;184851;184852;184853;184854;184855;184856;184857;184858;184859 147329;147330;147331;147332;147333;147334;147335;147336;147337;147338;147339;147340;147341 147341 13 HPSEMPQLVK Unmodified 1164.5961 0.59612879 3076 Q7Z2Z2 EFTUD1 Elongation factor Tu GTP-binding domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 48.399 42.83 2 0.00075964 56270 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.28 91.777 77218000 21958000 34788000 20472000 0 0 0 0 0 0 0 0 0 0 0 0 22015 3076 20101 184860;184861;184862;184863 147342;147343;147344;147345;147346 147343 5 HPSEMPQLVK Oxidation (M) 1180.591 0.59104341 3076 Q7Z2Z2 EFTUD1 Elongation factor Tu GTP-binding domain-containing protein 1 yes yes 0 1 0 By matching By matching By MS/MS 2 0 3 1 1 1 28.129 23.836 2 0.040869 30154 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 52.716 37.94 25303000 5037000 8856500 11410000 0 0 0 0 0 0 0 0 0 0 0 0 22016 3076 20101 184864;184865;184866 147347 147347 1 HPSHSTTPSGPGDEVAR Unmodified 1730.7972 0.79722445 1711 P53365 ARFIP2 Arfaptin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 1 2 2 2 2 2 2 2 2 2 2 15.313 15.499 3;4 7.6549E-10 14017 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.286 58.167 408560000 0 0 0 15844000 7844000 20096000 25098000 19283000 12746000 24439000 76050000 46993000 50495000 45114000 64554000 22017 1711 20102 184867;184868;184869;184870;184871;184872;184873;184874;184875;184876;184877;184878;184879;184880;184881;184882;184883;184884;184885;184886;184887;184888;184889 147348;147349;147350;147351;147352;147353;147354;147355;147356;147357;147358;147359;147360;147361;147362;147363;147364 147354 16 HPSKPDPSGECNPDLR Unmodified 1804.8162 0.81624534 2169 Q09028 RBBP4 Histone-binding protein RBBP4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 21.9 22.107 3;4 3.2792E-08 22547 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 90.444 83.715 879530000 0 0 0 39456000 32615000 47404000 53381000 42952000 47299000 63412000 117550000 117760000 78809000 100030000 138860000 22018 2169 20103 184890;184891;184892;184893;184894;184895;184896;184897;184898;184899;184900;184901;184902;184903;184904;184905;184906;184907;184908;184909;184910;184911;184912;184913 147365;147366;147367;147368;147369;147370;147371;147372;147373;147374;147375;147376;147377;147378;147379;147380;147381;147382 147379 14 HPSQSTVCQK Unmodified 1170.5452 0.54515585 2972 Q6UB99 ANKRD11 Ankyrin repeat domain-containing protein 11 yes yes 0 0 0 By MS/MS By matching By MS/MS 2 0 3 1 1 1 6.5563 3.592 2 6.7626E-05 6512 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 123.21 69.003 35160000 19839000 9401000 5920000 0 0 0 0 0 0 0 0 0 0 0 0 22019 2972 20104 184914;184915;184916 147383;147384 147383 2 HPSSPECLVSAQK Unmodified 1438.6875 0.68746299 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 1 3 2 38.779 34.079 2;3 2.2404E-25 44290 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 180.19 129.13 125850000 6695100 85277000 33883000 0 0 0 0 0 0 0 0 0 0 0 0 22020 2459 20105 184917;184918;184919;184920;184921;184922 147385;147386;147387;147388;147389;147390;147391 147385 5 HPSTGVQLLSEQK Unmodified 1422.7467 0.74669243 459 O75140 DEPDC5 DEP domain-containing protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 2 1 1 1 1 48.974 43.397 3 0.0072686 54481 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 49.423 37.891 9800700 5316600 1457500 3026500 0 0 0 0 0 0 0 0 0 0 0 0 22021 459 20106 184923;184924;184925 147392;147393;147394 147394 2 HPSVESVVQCEIDEDVIQVSK Unmodified 2396.153 0.15295477 1093 P19623 SRM Spermidine synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.29 0.452 5 2 2 4 1 91.477 86.965 3 2.1424E-104 108625 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 127.37 122.82 157330000 78229000 74444000 4656300 0 0 0 0 0 0 0 0 0 0 0 0 22022 1093 20107 184926;184927;184928;184929;184930;184931;184932 147395;147396;147397;147398;147399;147400;147401;147402;147403 147400 8 HPSVLER Unmodified 836.45045 0.45045083 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 14.456 14.61 2 0.030787 13220 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.415 43.112 142830000 0 0 0 9131700 9238600 9786400 9636600 9707600 8021700 13628000 14616000 16587000 19675000 0 22802000 22023 5262 20108 184933;184934;184935;184936;184937;184938;184939;184940;184941;184942;184943 147404;147405;147406 147404 3 HPSVNENFCNEK Unmodified 1473.6307 0.6306764 5085 Q9Y263 PLAA Phospholipase A-2-activating protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.24 3.75 5 1 11 1 3 2 1 1 1 1 1 1 1 1 1 1 1 27.905 26.571 2;3 1.1448E-18 35161 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.71 122.85 384290000 13256000 138870000 193020000 1420600 0 4265500 2078200 1772400 1453200 4358400 4548000 5331300 3310600 4154600 6449800 22024 5085 20109 184944;184945;184946;184947;184948;184949;184950;184951;184952;184953;184954;184955;184956;184957;184958;184959;184960 147407;147408;147409;147410;147411;147412;147413;147414;147415;147416 147407 9 HPTGNSITK Unmodified 953.49304 0.49304393 2830 Q5VZ89 DENND4C DENN domain-containing protein 4C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 5.9848 6.0313 2 0.033064 3847 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 47.082 20.48 5434100 0 0 0 982080 0 1580900 0 1553900 1317300 0 0 0 0 0 0 22025 2830 20110 184961;184962;184963;184964 147417;147418 147417 2 HPTGPFFPVLSK Unmodified 1325.7132 0.71320746 4968 Q9UKJ3 GPATCH8 G patch domain-containing protein 8 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 75.703 75.841 2 0.025582 87937 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 70.028 47.942 33046000 0 0 0 0 0 0 0 17978000 0 0 0 0 15067000 0 0 22026 4968 20111 184965;184966 147419 147419 0 HPTGTTPPVK Unmodified 1033.5556 0.55564418 3994 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a yes yes 0 0 0 By MS/MS 10 0 1 1 11.766 11.927 2 0.012504 10815 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 69.628 32.469 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22027 3994 20112 184967 147420 147420 1 HPTLLQDPDLR Unmodified 1303.6884 0.68844927 428 O60749 SNX2 Sorting nexin-2 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 10 0 9 1 2 1 1 1 1 1 1 53.785 54.073 2;3 0.012252 59918 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 31.136 20.23 41914000 0 0 0 0 0 7413400 5353700 3935400 0 0 3342100 4907700 5039400 2609900 9312700 22028 428 20113 184968;184969;184970;184971;184972;184973;184974;184975;184976 147421;147422;147423 147422 2 HPTPTMLSIQK Unmodified 1251.6645 0.66454271 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 46.794 47.134 2 0.014763 52300 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.717 28.575 6482400 0 0 0 0 0 0 0 0 0 0 3148600 0 0 3333700 0 22029 213 20114 184977;184978;184979 147424;147425 147425 2 HPTTPSSTAK Unmodified 1025.5142 0.5141733 441 O60885 BRD4 Bromodomain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 5.9667 5.2891 2 9.5044E-06 5329 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.22 82.438 652960000 249430000 279310000 88430000 3832800 1948700 3542600 3802300 2918200 2684800 2803700 1178400 1466900 2135500 2383500 7098900 22030 441 20115 184980;184981;184982;184983;184984;184985;184986;184987;184988;184989;184990;184991;184992;184993;184994;184995 147426;147427;147428;147429;147430;147431;147432;147433;147434;147435;147436 147427 10 HPVEVVYLSEAQK Unmodified 1497.7827 0.78274359 3056 Q7L7V1 DHX32 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 1 2 61.615 56.33 2;3 0.00079946 76334 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 59.116 52.077 24776000 7579200 0 17197000 0 0 0 0 0 0 0 0 0 0 0 0 22031 3056 20116 184996;184997;184998 147437;147438;147439 147437 3 HPVSEYK Unmodified 858.42357 0.42356738 3395 Q8NBJ5 COLGALT1 Procollagen galactosyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 7.1927 4.4624 2 0.03416 6607 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.265 38.22 309080000 0 173870000 135210000 0 0 0 0 0 0 0 0 0 0 0 0 22032 3395 20117 184999;185000 147440 147440 1 HPVSLEQYLMEGSYNK Oxidation (M) 1909.888 0.88801329 1544 P48556 PSMD8 26S proteasome non-ATPase regulatory subunit 8 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.21 3.75 4 1 9 2 2 1 1 1 1 1 1 1 1 1 1 76.223 74.371 2;3 2.2946E-40 95547 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 142.97 133.13 416570000 188940000 52090000 20476000 0 5829500 19587000 5466800 10477000 6491500 29562000 22325000 29431000 0 0 25892000 22033 1544 20118 185001;185002;185003;185004;185005;185006;185007;185008;185009;185010;185011;185012;185013;185014 147441;147442;147443;147444;147445;147446 147445 2452 3 HPVSLEQYLMEGSYNK Unmodified 1893.8931 0.89309867 1544 P48556 PSMD8 26S proteasome non-ATPase regulatory subunit 8 yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 86.077 79.065 2;3 8.227E-81 101719 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 210.64 185.3 158200000 102200000 55998000 0 0 0 0 0 0 0 0 0 0 0 0 0 22034 1544 20118 185015;185016;185017 147447;147448;147449;147450 147450 4 HPWDDISYVLPEHMSM 2 Oxidation (M) 1987.8444 0.84443392 1714 P53396 ACLY ATP-citrate synthase yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 2 2 1 1 1 82.707 82.815 2;3 6.6312E-05 95562 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 68.034 66.626 127550000 0 0 0 825620 0 0 8025500 48745000 46058000 6954900 6626000 10316000 0 0 0 22035 1714 20119 185018;185019;185020;185021;185022;185023;185024;185025;185026 147451;147452;147453;147454;147455;147456;147457 147452 2775;2776 6 HPYLPINSAAIK Unmodified 1322.7347 0.73467118 2272 Q13330 MTA1 Metastasis-associated protein MTA1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 62.478 62.568 2 0.00094402 70573 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.275 44.057 55097000 0 0 0 3319800 2821200 5239300 3602900 0 2613200 5650700 5464100 6644900 4445700 4866400 10428000 22036 2272 20120 185027;185028;185029;185030;185031;185032;185033;185034;185035;185036;185037 147458;147459;147460;147461;147462;147463 147460 6 HPYYPCMAK Unmodified 1165.5049 0.50487094 5061 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 0 0 0 By MS/MS 2 0 1 1 39.862 33.239 2 0.0061878 46239 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 121.29 99.161 22362000 22362000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22037 5061 20121 185038 147464;147465 147465 2 HQAFEAELSANQSR Unmodified 1586.7437 0.74373232 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 39.981 40.332 3 0.010401 43609 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 24.455 11.577 51075000 0 0 0 0 0 5092400 0 0 3320200 7660600 0 13337000 0 5995300 15670000 22038 2344 20122 185039;185040;185041;185042;185043;185044 147466;147467;147468;147469 147468 3 HQAFEAELSANQSRIDALEK Unmodified 2256.1135 0.11347321 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS By MS/MS 2.25 0.433 3 1 2 2 76.198 70.034 3;4 2.221E-29 90220 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 114.53 106.34 116760000 66443000 50318000 0 0 0 0 0 0 0 0 0 0 0 0 0 22039 2344 20123 185045;185046;185047;185048 147470;147471;147472 147471 3 HQAFEAEVQANSGAIVK Unmodified 1797.901 0.90096124 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 1 3 1 62.395 57.28 2;3 1.252E-62 74104 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 173.44 150.91 193070000 1740200 162680000 28656000 0 0 0 0 0 0 0 0 0 0 0 0 22040 2344 20124 185049;185050;185051;185052;185053 147473;147474;147475;147476;147477;147478 147473 6 HQAFMAELAANK Oxidation (M) 1345.6449 0.6448699 241 O15020 SPTBN2 Spectrin beta chain, non-erythrocytic 2 yes yes 0 1 0 By MS/MS By matching 2 0 2 1 1 41.326 36.155 3 0.013753 50238 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.426 27.039 24268000 18922000 0 5345300 0 0 0 0 0 0 0 0 0 0 0 0 22041 241 20125 185054;185055 147479 147479 328 1 HQAFMAELAANK Unmodified 1329.65 0.64995528 241 O15020 SPTBN2 Spectrin beta chain, non-erythrocytic 2 yes yes 0 0 0 By MS/MS 2 0 1 1 64.645 56.366 3 0.011452 75828 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 34.183 25.454 14166000 14166000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22042 241 20125 185056 147480;147481 147480 2 HQAFMAELASNK Unmodified 1345.6449 0.6448699 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5 3.87 5 3 2 2 1 1 1 1 56.081 51.711 2;3 1.9282E-82 71683 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 240.41 120.08 343580000 182440000 120730000 5687900 0 0 0 0 0 0 0 0 9994000 0 0 24725000 22043 2047 20126 185057;185058;185059;185060;185061;185062;185063;185064 147482;147483;147484;147485;147486;147487;147488;147489;147490 147488 8 HQAFMAELASNK Oxidation (M) 1361.6398 0.63978452 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 38.543 33.63 3 0.0011706 41680 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 75.088 68.389 188170000 121120000 38885000 28166000 0 0 0 0 0 0 0 0 0 0 0 0 22044 2047 20126 185065;185066;185067;185068 147491;147492;147493;147494 147491 3321 2 HQALLLDTNK Unmodified 1151.6299 0.62987176 1575 P49454 CENPF Centromere protein F yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 43.819 38.489 2 0.0048489 53278 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.97 59.376 12458000 9369800 0 3088300 0 0 0 0 0 0 0 0 0 0 0 0 22045 1575 20127 185069;185070 147495 147495 1 HQALQAEIAGHEPR Unmodified 1555.7855 0.78553755 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 37.505 36.833 3 0.0002194 40452 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 77.24 69.524 258720000 26303000 0 8889400 7894500 0 22384000 13225000 0 8182400 14993000 19839000 27519000 21401000 25087000 63006000 22046 2344 20128 185071;185072;185073;185074;185075;185076;185077;185078;185079;185080;185081;185082 147496;147497;147498;147499;147500;147501;147502;147503;147504;147505;147506;147507 147505 8 HQAQIDHYLGLANK Unmodified 1606.8216 0.82158871 4566 Q9NQC3 RTN4 Reticulon-4 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 53.644 53.949 3 0.028862 61734 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 30.027 22.483 126000000 0 0 0 0 0 10006000 0 12803000 8856500 7890700 11145000 19541000 15958000 9071400 30726000 22047 4566 20129 185083;185084;185085;185086;185087;185088;185089;185090;185091 147508 147508 1 HQASINELK Unmodified 1038.5458 0.54580778 4397 Q9H4G0 EPB41L1 Band 4.1-like protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS 2 0 4 2 1 1 24.945 20.608 2 0.00065366 27446 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.27 79.708 94511000 28946000 33080000 32486000 0 0 0 0 0 0 0 0 0 0 0 0 22048 4397 20130 185092;185093;185094;185095 147509;147510 147509 1 HQASISELK Unmodified 1011.5349 0.53490874 334 O43491 EPB41L2 Band 4.1-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 26.728 22.525 2 0.032081 28564 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 65.465 14.406 34545000 6434800 16023000 12087000 0 0 0 0 0 0 0 0 0 0 0 0 22049 334 20131 185096;185097;185098 147511 147511 1 HQATGELDDAK Unmodified 1183.5469 0.54692999 16 A3KMH1 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 9.9441 10.025 2 0.017756 8125 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.721 34.749 13648000 0 0 0 0 1380100 1235300 1634100 1855500 1869700 1508400 0 4165200 0 0 0 22050 16 20132 185099;185100;185101;185102;185103;185104;185105 147512;147513 147513 2 HQAVQLPREGQEDQGLTK Unmodified 2033.029 0.029015303 687 O95758 PTBP3 Polypyrimidine tract-binding protein 3 yes yes 0 0 1 By MS/MS By MS/MS 2 0 4 2 2 46.779 40.959 3;4 9.0082E-05 57042 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.27 58.513 87088000 70527000 0 16562000 0 0 0 0 0 0 0 0 0 0 0 0 22051 687 20133 185106;185107;185108;185109 147514;147515;147516;147517;147518 147516 4 HQCITAMK Oxidation (M) 1003.4579 0.45792075 1707 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6.8309 6.4455 2 0.0029012 4520 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 131.22 94.129 361120000 86292000 29873000 0 12134000 11828000 11973000 17648000 19730000 15540000 25204000 25725000 29770000 26107000 25419000 23873000 22052 1707 20134 185110;185111;185112;185113;185114;185115;185116;185117;185118;185119;185120;185121;185122;185123;185124 147519;147520;147521;147522;147523;147524;147525;147526;147527;147528;147529;147530 147520 2756 12 HQCITAMK Unmodified 987.46301 0.46300613 1707 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14.888 14.522 2 2.2739E-18 13924 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 173.23 123.2 376100000 61799000 0 11493000 13070000 13432000 13455000 15416000 24524000 12727000 27899000 32316000 35359000 32199000 32776000 49638000 22053 1707 20134 185125;185126;185127;185128;185129;185130;185131;185132;185133;185134;185135;185136;185137;185138 147531;147532;147533;147534;147535;147536;147537;147538;147539;147540;147541;147542 147542 12 HQDDLQDVIGRAVEIGVK Unmodified 1991.0436 0.043602734 2922 Q6P1N9 TATDN1 Putative deoxyribonuclease TATDN1 yes yes 0 0 1 By MS/MS By MS/MS 2.67 0.471 1 2 2 1 89.832 84.867 3 1.4256E-19 108007 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 114.96 105.31 39991000 37014000 2977500 0 0 0 0 0 0 0 0 0 0 0 0 0 22054 2922 20135 185139;185140;185141 147543;147544;147545;147546 147546 4 HQDVPSQDDSK Unmodified 1254.5477 0.54765827 4607 Q9NRN7 AASDHPPT L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase yes yes 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.7327 6.8564 2 7.5732E-05 4716 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 130.98 85.901 22788000 0 0 0 649970 437260 4319500 969740 1493800 2163400 2148300 2402400 2192200 778440 1897700 3335000 22055 4607 20136 185142;185143;185144;185145;185146;185147;185148;185149;185150;185151;185152;185153 147547 147547 1 HQDVPSQDDSKPTQR Unmodified 1736.8078 0.80778914 4607 Q9NRN7 AASDHPPT L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 9.7045 9.9113 3 1.6024E-20 6132 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 116 109.97 127740000 0 0 0 0 0 13133000 0 9604900 4908200 12535000 32738000 21211000 6464400 8989900 18155000 22056 4607 20137 185154;185155;185156;185157;185158;185159;185160;185161;185162 147548;147549;147550;147551;147552;147553;147554;147555;147556;147557;147558 147553 10 HQEEESETEEDEEDTPGHK Unmodified 2253.8782 0.87817271 95 CON__Q5D862;Q5D862 FLG2 Filaggrin-2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 3 3 1 2 3 1 1 1 2 3 2 1 11.392 11.495 3;4 0 10705 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 217.4 217.4 + 360330000 0 0 0 86747000 15792000 17799000 22656000 47554000 18568000 20325000 10841000 47721000 48280000 13868000 10175000 22057 95 20138 185163;185164;185165;185166;185167;185168;185169;185170;185171;185172;185173;185174;185175;185176;185177;185178;185179;185180;185181;185182;185183;185184;185185 147559;147560;147561;147562;147563;147564;147565;147566;147567;147568;147569;147570;147571;147572;147573;147574;147575 147565 17 HQEELTELHK Unmodified 1262.6255 0.62551466 2849 Q676U5 ATG16L1 Autophagy-related protein 16-1 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 7 3.87 3 5 1 1 1 1 1 1 1 1 23.428 21.947 3 0.00087953 28762 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 85.355 68.412 126680000 5231900 14493000 64985000 5698200 4616200 0 0 0 0 0 0 0 7530600 7445600 16675000 22058 2849 20139 185186;185187;185188;185189;185190;185191;185192;185193 147576;147577;147578;147579;147580;147581;147582 147580 6 HQEGEIFDTEK Unmodified 1331.5994 0.59935949 2083 Q02878 RPL6 60S ribosomal protein L6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 31.606 31.792 2;3 8.5057E-16 33271 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 176.42 129.34 381550000 0 0 0 27925000 26640000 19516000 22883000 21058000 16936000 29621000 32466000 71417000 34242000 31887000 46964000 22059 2083 20140 185194;185195;185196;185197;185198;185199;185200;185201;185202;185203;185204;185205;185206;185207;185208;185209;185210;185211;185212;185213;185214;185215;185216;185217 147583;147584;147585;147586;147587;147588;147589;147590;147591;147592 147589 5 HQEHILR Unmodified 931.4988 0.49879801 2262 Q13263 TRIM28 Transcription intermediary factor 1-beta yes yes 0 0 0 By MS/MS 10 0 1 1 8.6549 8.9972 2 0.046674 6543 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.803 28.158 13132000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13132000 22060 2262 20141 185218 147593 147593 1 HQELETLK Unmodified 996.52401 0.52400971 4359 Q9H269 VPS16 Vacuolar protein sorting-associated protein 16 homolog yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 25.97 21.801 2 0.0059758 28793 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.14 62.399 65235000 0 65235000 0 0 0 0 0 0 0 0 0 0 0 0 0 22061 4359 20142 185219;185220 147594 147594 1 HQEPVYSVAFSPDGK Unmodified 1659.7893 0.78928553 443;4091 O60907;Q9BQ87 TBL1X;TBL1Y F-box-like/WD repeat-containing protein TBL1X;F-box-like/WD repeat-containing protein TBL1Y no no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 61.434 60.388 3 0.0066309 68039 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.477 32.929 65309000 6369600 0 10616000 0 0 6491200 4063000 5000700 4011400 5525800 0 0 6142600 5758100 11331000 22062 443;4091 20143 185221;185222;185223;185224;185225;185226;185227;185228;185229;185230 147595;147596;147597;147598;147599;147600;147601;147602 147597 8 HQEPVYSVAFSPDGR Unmodified 1687.7954 0.79543354 4270 Q9BZK7 TBL1XR1 F-box-like/WD repeat-containing protein TBL1XR1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 1 2 2 2 2 2 2 2 2 2 2 2 61.609 61.744 2;3 4.7245E-10 70271 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 74.428 72.583 352800000 0 0 0 6977800 9950200 16744000 13906000 25468000 14644000 28640000 37644000 50305000 27743000 39137000 81645000 22063 4270 20144 185231;185232;185233;185234;185235;185236;185237;185238;185239;185240;185241;185242;185243;185244;185245;185246;185247;185248;185249;185250;185251;185252;185253 147603;147604;147605;147606;147607;147608;147609;147610;147611;147612;147613;147614;147615;147616;147617;147618;147619;147620;147621;147622;147623;147624;147625 147617 16 HQEYLNSILQHAK Unmodified 1579.8107 0.81068967 1656;1655 P51532;P51531 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 no no 0 0 0 By MS/MS By MS/MS 6.5 3.5 1 1 1 1 63.762 61.716 3 4.4216E-08 67737 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.96 77.164 22778000 0 5643200 0 0 0 0 0 0 0 0 0 0 0 0 17135000 22064 1656;1655 20145 185254;185255 147626;147627 147626 2 HQFNSNAVTDINLDNVCK Unmodified 2087.9695 0.96945151 3024 Q70CQ2 USP34 Ubiquitin carboxyl-terminal hydrolase 34 yes yes 0 0 0 By MS/MS 3 0 1 1 73.288 69.34 3 0.0010718 83905 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 49.049 43.944 1798000 0 1798000 0 0 0 0 0 0 0 0 0 0 0 0 0 22065 3024 20146 185256 147628 147628 1 HQGAGDPHTSNSASLQGIDSQCVNQPEQLVSSAPTLSAPEK Unmodified 4241.9884 0.98835564 4476 Q9H9Q4 NHEJ1 Non-homologous end-joining factor 1 yes yes 0 0 0 By MS/MS 2 0 1 1 78.284 75.656 4 1.44E-52 91896 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 85.939 82.055 22993000 0 0 22993000 0 0 0 0 0 0 0 0 0 0 0 0 22066 4476 20147 185257 147629 147629 1 HQGDLSSGYLDDTK Unmodified 1534.69 0.68996541 186 O14545 TRAFD1 TRAF-type zinc finger domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 38.427 38.711 3 0.0021365 41722 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.405 42.69 47051000 0 0 0 3430400 0 0 0 3306200 3533000 4281900 6521000 7824800 5477700 4909300 7766700 22067 186 20148 185258;185259;185260;185261;185262;185263;185264;185265;185266 147630;147631;147632;147633 147631 4 HQGLPQEVLNENLLR Unmodified 1758.9377 0.9376811 59 CON__P02662 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 2 1 1 1 1 1 1 77.745 77.831 2;3 0.00012514 89772 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 69.729 59.095 + 117690000 0 0 0 0 5296100 53408000 8811400 8478200 12207000 6062700 11426000 0 0 0 11998000 22068 59 20149 185267;185268;185269;185270;185271;185272;185273;185274;185275 147634;147635;147636;147637;147638 147634 5 HQGVMVGMGQK 2 Oxidation (M) 1202.5536 0.55361205 1951;1815;1958;2711 P60709;P63261;P68032;P63267;P68133;P62736;Q562R1 ACTB;ACTG1;ACTC1;ACTG2;ACTA1;ACTA2;ACTBL2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, aortic smooth muscle;Beta-actin-like protein 2 no no 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 50 6 4 5 5 4 3 4 2 1 3 6 7 10.996 11.127 2;3 6.2219E-06 5846 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 124.74 106.2 9546800000 0 0 0 1024300000 814320000 681160000 287580000 204490000 285350000 925620000 2561600000 587620000 477920000 844810000 852100000 22069 1815;1951;1958;2711 20150 185276;185277;185278;185279;185280;185281;185282;185283;185284;185285;185286;185287;185288;185289;185290;185291;185292;185293;185294;185295;185296;185297;185298;185299;185300;185301;185302;185303;185304;185305;185306;185307;185308;185309;185310;185311;185312;185313;185314;185315;185316;185317;185318;185319;185320;185321;185322;185323;185324;185325 147639;147640;147641;147642;147643;147644;147645;147646;147647;147648;147649;147650;147651;147652;147653;147654;147655;147656;147657;147658;147659;147660;147661;147662;147663;147664;147665;147666;147667;147668;147669;147670;147671;147672;147673 147657 2943;2944 19 HQGVMVGMGQK Oxidation (M) 1186.5587 0.55869743 1951;1815;1958;2711 P60709;P63261;P68032;P63267;P68133;P62736;Q562R1 ACTB;ACTG1;ACTC1;ACTG2;ACTA1;ACTA2;ACTBL2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, aortic smooth muscle;Beta-actin-like protein 2 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.64 1.67 4 84 2 2 7 8 6 7 7 6 7 8 7 6 6 9 18.513 18.521 2;3 3.0049E-16 18535 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 169.09 151.85 15841000000 32043000 0 7154100 1194700000 1150400000 520520000 940610000 1292500000 984430000 1625100000 1053800000 2777300000 1546500000 688320000 2027700000 22070 1815;1951;1958;2711 20150 185326;185327;185328;185329;185330;185331;185332;185333;185334;185335;185336;185337;185338;185339;185340;185341;185342;185343;185344;185345;185346;185347;185348;185349;185350;185351;185352;185353;185354;185355;185356;185357;185358;185359;185360;185361;185362;185363;185364;185365;185366;185367;185368;185369;185370;185371;185372;185373;185374;185375;185376;185377;185378;185379;185380;185381;185382;185383;185384;185385;185386;185387;185388;185389;185390;185391;185392;185393;185394;185395;185396;185397;185398;185399;185400;185401;185402;185403;185404;185405;185406;185407;185408;185409;185410;185411;185412;185413 147674;147675;147676;147677;147678;147679;147680;147681;147682;147683;147684;147685;147686;147687;147688;147689;147690;147691;147692;147693;147694;147695;147696;147697;147698;147699;147700;147701;147702;147703;147704;147705;147706;147707;147708;147709;147710;147711;147712;147713;147714;147715;147716;147717;147718;147719;147720;147721;147722;147723;147724;147725;147726;147727;147728;147729;147730;147731;147732;147733;147734;147735;147736;147737;147738;147739;147740;147741;147742;147743;147744;147745;147746;147747;147748;147749 147733 2943;2944 48 HQGVMVGMGQK Unmodified 1170.5638 0.5637828 1951;1815;1958;2711 P60709;P63261;P68032;P63267;P68133;P62736;Q562R1 ACTB;ACTG1;ACTC1;ACTG2;ACTA1;ACTA2;ACTBL2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, aortic smooth muscle;Beta-actin-like protein 2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.68 1.57 1 24 1 2 2 2 2 2 2 2 2 2 2 2 2 25.995 25.945 2;3 3.8166E-127 27156 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 222.18 185.78 11089000000 15701000 0 0 651430000 765000000 975210000 826580000 811350000 572970000 722480000 967990000 1210500000 679970000 761210000 2128600000 22071 1815;1951;1958;2711 20150 185414;185415;185416;185417;185418;185419;185420;185421;185422;185423;185424;185425;185426;185427;185428;185429;185430;185431;185432;185433;185434;185435;185436;185437;185438 147750;147751;147752;147753;147754;147755;147756;147757;147758;147759;147760;147761;147762;147763;147764;147765;147766;147767;147768;147769;147770;147771;147772;147773;147774;147775;147776;147777;147778;147779;147780;147781;147782;147783;147784;147785;147786;147787;147788;147789;147790;147791;147792;147793;147794;147795;147796;147797;147798;147799;147800;147801;147802;147803;147804;147805;147806;147807;147808;147809;147810;147811;147812;147813;147814;147815;147816;147817 147775 64 HQIIAELK Unmodified 950.55492 0.5549159 3599 Q8WYA0 IFT81 Intraflagellar transport protein 81 homolog yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 43.853 38.523 2 0.018345 53117 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.819 48.716 22475000 19646000 0 2828800 0 0 0 0 0 0 0 0 0 0 0 0 22072 3599 20151 185439;185440 147818 147818 1 HQILEQAVEDYAETVHQLSK Unmodified 2337.1601 0.16008906 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS 2 0 1 1 94.437 86.307 3 0.0069377 111823 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 39.367 30.659 14323000 14323000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22073 2047 20152 185441 147819 147819 0 HQINIEK Unmodified 880.47667 0.47666558 1789 P56962 STX17 Syntaxin-17 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 17.763 13.863 2 0.022163 19866 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.9 60.047 95261000 15363000 79898000 0 0 0 0 0 0 0 0 0 0 0 0 0 22074 1789 20153 185442;185443 147820 147820 1 HQITYLIHQAK Unmodified 1350.7408 0.74081919 3653 Q92733 PRCC Proline-rich protein PRCC yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 2 39.889 40.271 2;3 7.6012E-05 44672 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 110.08 98.758 318020000 0 0 0 0 0 27939000 0 8562200 19257000 33371000 35250000 41578000 28805000 24487000 98774000 22075 3653 20154 185444;185445;185446;185447;185448;185449;185450;185451;185452;185453 147821;147822;147823;147824;147825;147826;147827;147828;147829;147830;147831 147826 10 HQIVEVAGDDK Unmodified 1209.599 0.59896556 2146 Q07960 ARHGAP1 Rho GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 25.16 24.712 2 2.1209E-07 26569 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 164.04 111.32 225040000 0 10909000 0 18277000 8779600 26669000 14808000 13487000 12127000 20144000 21430000 20431000 18339000 16281000 23362000 22076 2146 20155 185454;185455;185456;185457;185458;185459;185460;185461;185462;185463;185464;185465;185466;185467 147832;147833;147834;147835;147836;147837;147838;147839;147840;147841;147842;147843;147844;147845;147846;147847;147848;147849;147850 147833 18 HQKPVLTGQR Unmodified 1162.6571 0.65708956 5280 Q9Y6E2 BZW2 Basic leucine zipper and W2 domain-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 8.9436 9.0767 3 0.0049714 6050 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 50.452 50.452 149690000 0 0 0 13056000 11851000 1932300 14068000 6384200 2086900 6819300 37387000 29259000 9168200 6183800 11492000 22077 5280 20156 185468;185469;185470;185471;185472;185473;185474;185475;185476;185477;185478;185479 147851;147852;147853;147854 147852 2 HQLEAHGAGGEPDAPK Unmodified 1612.7594 0.75938238 4642 Q9NUA8 ZBTB40 Zinc finger and BTB domain-containing protein 40 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 15.312 15.702 3 0.0087592 14360 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 34.87 27.326 53444000 0 0 0 0 0 0 0 0 0 0 7482500 18428000 11062000 6949500 9521500 22078 4642 20157 185480;185481;185482;185483;185484 147855;147856;147857 147855 3 HQLEEELR Unmodified 1052.5251 0.52507234 5009 Q9ULW0 TPX2 Targeting protein for Xklp2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.59 24.78 2 0.0067419 26542 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 98.299 42.289 59439000 0 0 0 5484300 4549100 6100800 5403100 6455200 3954200 5160300 5316200 7233400 0 3863900 5918400 22079 5009 20158 185485;185486;185487;185488;185489;185490;185491;185492;185493;185494;185495;185496 147858;147859;147860;147861;147862;147863;147864;147865;147866;147867;147868;147869;147870 147860 12 HQLEETK Unmodified 883.43995 0.43994572 1132 P22059 OSBP Oxysterol-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 3 1 4.3343 1.2598 2 0.015183 3676 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 155.75 19.641 652790000 21228000 610170000 21388000 0 0 0 0 0 0 0 0 0 0 0 0 22080 1132 20159 185497;185498;185499;185500;185501 147871;147872;147873 147872 3 HQLEIFDALGSQACSNK Unmodified 1916.9051 0.90506034 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS 2 0 1 1 84.047 75.917 3 0.00026405 99168 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.275 54.429 9478700 9478700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22081 5049 20160 185502 147874 147874 1 HQLFLQLK Unmodified 1025.6022 0.60220045 2255 Q13227 GPS2 G protein pathway suppressor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 60.854 60.874 2 0.033652 68854 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.457 59.666 65270000 0 0 0 4938200 4190500 8444200 8183300 0 0 7700700 0 12340000 0 0 19473000 22082 2255 20161 185503;185504;185505;185506;185507;185508;185509 147875 147875 0 HQLLEADISAHEDRLK Unmodified 1873.9646 0.96462413 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS 2 0 1 1 61.634 53.378 4 0.0067506 72198 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.548 30.863 11156000 11156000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22083 2344 20162 185510 147876 147876 1 HQLNELGSESAK Unmodified 1311.6419 0.64189301 2891 Q6KC79 NIPBL Nipped-B-like protein yes yes 0 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 2 2 25.676 22.097 2;3 0.013139 29597 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.962 63.81 19960000 0 8726000 11234000 0 0 0 0 0 0 0 0 0 0 0 0 22084 2891 20163 185511;185512;185513;185514 147877;147878;147879;147880 147877 2 HQLPVNIDAR Unmodified 1161.6255 0.62545508 2706 Q53LP3 SOWAHC Ankyrin repeat domain-containing protein SOWAHC yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.184 45.421 2 0.0024122 51038 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 87.639 53.843 74709000 0 0 0 0 2882800 7563300 5397800 7025000 3975700 7316200 5702000 7291800 8768700 7375500 11410000 22085 2706 20164 185515;185516;185517;185518;185519;185520;185521;185522;185523;185524;185525;185526 147881;147882;147883;147884;147885;147886;147887;147888 147886 8 HQLQVQMENTLK Oxidation (M) 1483.7453 0.74531222 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 2 2 1 35.247 30.465 2;3 0.0010808 38531 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 76.522 58.857 61036000 16575000 27592000 16869000 0 0 0 0 0 0 0 0 0 0 0 0 22086 2495 20165 185527;185528;185529;185530;185531 147889;147890;147891;147892;147893;147894;147895 147895 4101 6 HQLQVQMENTLK Unmodified 1467.7504 0.7503976 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 4 2 2 56.471 49.473 2;3 0.00033659 67003 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 103.43 73.659 130190000 68924000 61266000 0 0 0 0 0 0 0 0 0 0 0 0 0 22087 2495 20165 185532;185533;185534;185535 147896;147897 147896 2 HQNVQLPR Unmodified 990.53591 0.5359118 1208 P26599 PTBP1 Polypyrimidine tract-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.767 22.972 2 0.0017372 24121 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 149.4 78.487 1426200000 0 0 0 83648000 68973000 96376000 76036000 72428000 52498000 177520000 113080000 165890000 128600000 139370000 251790000 22088 1208 20166 185536;185537;185538;185539;185540;185541;185542;185543;185544;185545;185546;185547 147898;147899;147900;147901;147902;147903;147904;147905;147906;147907;147908;147909;147910 147900 13 HQNVQLPREGQEDQGLTK Unmodified 2076.0348 0.034828962 1208 P26599 PTBP1 Polypyrimidine tract-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.34 3.68 8 3 21 5 3 3 2 2 2 2 2 2 2 1 1 1 2 2 39.976 38.19 2;3;4 8.9677E-55 52893 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 149.09 139.4 2341300000 1086300000 128290000 820140000 17951000 14701000 19940000 33823000 24196000 24870000 14784000 22671000 17154000 16553000 28066000 71835000 22089 1208 20167 185548;185549;185550;185551;185552;185553;185554;185555;185556;185557;185558;185559;185560;185561;185562;185563;185564;185565;185566;185567;185568;185569;185570;185571;185572;185573;185574;185575;185576;185577;185578;185579 147911;147912;147913;147914;147915;147916;147917;147918;147919;147920;147921;147922;147923;147924;147925;147926;147927;147928;147929;147930;147931;147932;147933;147934;147935 147921 18 HQPASASSTAASPAHPAK Unmodified 1714.8387 0.83869534 3915 Q96L91 EP400 E1A-binding protein p400 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 8.1057 8.2314 3 4.1204E-43 5547 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 118.72 108.37 151270000 0 0 0 6936800 5245900 3718500 4599700 7411500 6932200 13996000 44555000 23557000 10592000 11620000 12102000 22090 3915 20168 185580;185581;185582;185583;185584;185585;185586;185587;185588;185589;185590;185591 147936;147937;147938;147939;147940;147941;147942;147943;147944;147945;147946;147947 147940 9 HQPESEGLVGK Unmodified 1179.5884 0.58840088 2561 Q15652 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.681 16.86 2 0.037785 16170 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 37.191 13.102 25925000 0 0 0 1559500 1425500 1499700 1877800 1744900 1630600 1792600 2800000 3255400 2476100 1989900 3873200 22091 2561 20169 185592;185593;185594;185595;185596;185597;185598;185599;185600;185601;185602;185603 147948 147948 1 HQPGQAGGGWDELDSGPSSQNSSQNSDLSR Unmodified 3097.3358 0.3357746 3931 Q96N21 ENTHD2 AP-4 complex accessory subunit tepsin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 54.422 54.491 3 3.6974E-71 61671 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 106.6 100.23 73257000 0 0 0 3476100 3309400 4481600 4234400 10632000 7635600 7777300 8713700 16633000 0 6362800 0 22092 3931 20170 185604;185605;185606;185607;185608;185609;185610;185611;185612;185613 147949;147950;147951;147952;147953;147954;147955;147956;147957;147958;147959 147957 11 HQPSTPDPFLK Unmodified 1265.6404 0.64043645 202 O14686 KMT2D Histone-lysine N-methyltransferase 2D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 47.956 48.096 2 0.032964 54153 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 47.603 26.978 35219000 0 0 0 2188600 1792000 0 3923300 0 3127400 0 0 8159500 3970100 5095500 6962200 22093 202 20171 185614;185615;185616;185617;185618;185619;185620;185621 147960 147960 1 HQPTAIIAK Unmodified 977.56581 0.56581494 1249 P29401 TKT Transketolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.22 3.97 1 8 2 12 5 4 2 1 1 1 1 1 1 1 1 1 1 1 1 24.065 22.134 2 0.00039865 27850 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 128.36 83.669 16087000000 728040000 6870300000 6256200000 31584000 14398000 21830000 21701000 24956000 13922000 27613000 371610000 371620000 30925000 253700000 1049100000 22094 1249 20172 185622;185623;185624;185625;185626;185627;185628;185629;185630;185631;185632;185633;185634;185635;185636;185637;185638;185639;185640;185641;185642;185643;185644 147961;147962;147963;147964;147965;147966;147967;147968;147969;147970;147971;147972;147973;147974;147975;147976;147977;147978;147979;147980;147981;147982;147983;147984;147985;147986;147987;147988;147989;147990;147991;147992;147993;147994 147972 34 HQQALEVVNNNEEK Unmodified 1650.7962 0.79616182 2176 Q0VDG4 SCRN3 Secernin-3 yes yes 0 0 0 By MS/MS By MS/MS 2.2 0.4 4 1 3 2 33.043 28.982 2;3 0.00018969 36545 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 73.415 65.031 57351000 0 42390000 14961000 0 0 0 0 0 0 0 0 0 0 0 0 22095 2176 20173 185645;185646;185647;185648;185649 147995;147996;147997 147997 1 HQQDALWTEK Unmodified 1254.5993 0.59929991 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 6 1 1 1 1 1 1 33.3 33.405 2 0.021915 36614 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 46.39 31.239 30343000 0 0 0 0 3447700 5634600 4547300 4356000 4865700 0 0 0 0 0 7491400 22096 2291 20174 185650;185651;185652;185653;185654;185655 147998;147999 147999 2 HQQIPLHSPPSK Unmodified 1367.731 0.73098279 3419 Q8NDX5 PHC3 Polyhomeotic-like protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 3 9 2 1 1 1 1 1 1 1 1 1 1 26.685 25.961 2;3 0.0059272 33785 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 43.594 27.062 236690000 81713000 0 6750200 14160000 0 18576000 18718000 14526000 12141000 20214000 13124000 0 23068000 13703000 0 22097 3419 20175 185656;185657;185658;185659;185660;185661;185662;185663;185664;185665;185666;185667 148000;148001;148002;148003 148002 4 HQQLLEEK Unmodified 1023.5349 0.53490874 1357 P35580 MYH10 Myosin-10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 16.198 16.292 2 0.034963 15988 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 52.786 9.5394 18922000 0 0 0 2112000 0 1814000 3506300 0 1557200 2976300 0 0 3025200 3931300 0 22098 1357 20176 185668;185669;185670;185671;185672;185673;185674 148004 148004 1 HQQQLLASPGSSTVDNK Unmodified 1808.9017 0.90168952 4290 Q9C0E2 XPO4 Exportin-4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 35.835 36.117 3 0.00042482 38866 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 55.864 45.077 21854000 0 0 0 0 0 0 2784700 4385000 0 4014900 0 0 0 4209500 6459600 22099 4290 20177 185675;185676;185677;185678;185679 148005;148006;148007 148007 3 HQQSSTLGNSVVRCDK Unmodified 1814.8693 0.86934354 4258 Q9BZ29 DOCK9 Dedicator of cytokinesis protein 9 yes yes 0 0 1 By MS/MS 2 0 1 1 28.156 22.637 3 0.00017796 31904 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.894 44.683 17772000 17772000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22100 4258 20178 185680 148008 148008 1 HQSFVLVGETGSGK Unmodified 1444.731 0.73104237 295 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 2 1 47.733 48.148 2;3 1.1099E-08 53548 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 114.56 83.766 70765000 0 0 0 0 0 0 0 0 0 0 9213700 12659000 38077000 10815000 0 22101 295 20179 185681;185682;185683;185684;185685 148009;148010;148011;148012 148012 4 HQSIEEAK Unmodified 940.46141 0.46140945 2296 Q13464 ROCK1 Rho-associated protein kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 2 2 1 7.0155 3.8623 2 0.00027129 5555 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 161.02 69.394 161340000 26266000 95437000 39642000 0 0 0 0 0 0 0 0 0 0 0 0 22102 2296 20180 185686;185687;185688;185689;185690 148013;148014;148015 148014 3 HQSPEIVR Unmodified 964.50903 0.50902834 519 O75575 CRCP DNA-directed RNA polymerase III subunit RPC9 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 14.607 14.733 2 0.048162 14006 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 47.574 24.051 27984000 0 0 0 1775100 2032800 2803400 1791900 0 2787500 0 0 4624100 3004300 3393100 5772100 22103 519 20181 185691;185692;185693;185694;185695;185696;185697;185698;185699 148016;148017 148017 2 HQSSNLNVPELNSINMSR Unmodified 2038.9854 0.98543593 3984 Q96S59 RANBP9 Ran-binding protein 9 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 75.761 71.881 3 0.0002707 83336 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.704 40.702 27024000 17683000 0 0 0 0 0 0 0 0 0 0 0 0 0 9340800 22104 3984 20182 185700;185701 148018;148019 148018 2 HQTEDDFQR Unmodified 1174.5003 0.50031415 2558 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 11.496 11.643 2 0.005264 9524 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 78.516 71.692 57378000 0 0 0 3739000 3096200 3813200 4532300 3330000 3906800 4750500 3736800 7912500 5881800 6704900 5973500 22105 2558 20183 185702;185703;185704;185705;185706;185707;185708;185709;185710;185711;185712;185713 148020;148021;148022;148023;148024;148025;148026;148027;148028;148029;148030;148031 148027 12 HQTLELEK Unmodified 996.52401 0.52400971 4741 Q9NYD6;P31269;P28358;P31260 HOXC10;HOXA9;HOXD10;HOXA10 Homeobox protein Hox-C10;Homeobox protein Hox-A9;Homeobox protein Hox-D10;Homeobox protein Hox-A10 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 23.657 23.29 2 0.0043877 22910 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 110.87 54.861 149670000 0 36617000 35241000 0 3718600 5955100 4355300 3739300 3778600 10354000 9427900 12020000 8028000 8222600 8215200 22106 4741 20184 185714;185715;185716;185717;185718;185719;185720;185721;185722;185723;185724;185725;185726 148032;148033;148034;148035;148036;148037;148038;148039;148040;148041;148042 148039 11 HQTLQGLAFPLQPEAQR Unmodified 1933.017 0.016994053 2884 Q6IBS0 TWF2 Twinfilin-2 yes yes 0 0 0 By MS/MS 10 0 1 1 78.714 78.96 3 0.0054748 90850 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.214 26.292 18107000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18107000 22107 2884 20185 185727 148043 148043 1 HQTLQGVAFPISR Unmodified 1452.7837 0.78374664 2190 Q12792 TWF1 Twinfilin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 67.047 67.126 3 0.0018546 76697 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.405 39.355 136460000 0 0 0 1397400 2542700 13710000 4409700 4688200 5929800 0 15337000 18672000 7571900 12393000 49811000 22108 2190 20186 185728;185729;185730;185731;185732;185733;185734;185735;185736;185737;185738 148044;148045;148046;148047;148048 148048 5 HQTNISELK Unmodified 1068.5564 0.55637247 5106 Q9Y2J2 EPB41L3 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 23.943 24.106 2 0.031208 25730 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 47.849 10.29 64795000 0 0 0 5247800 2689600 3024400 2446800 6937300 2654900 7233300 4620500 17923000 7879300 4138800 0 22109 5106 20187 185739;185740;185741;185742;185743;185744;185745;185746;185747;185748;185749 148049 148049 1 HQTVPQNTGGK Unmodified 1165.584 0.5839842 763 P02787 TF Serotransferrin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching 10 0 5 1 1 1 1 1 6.3087 6.4525 2 6.6937E-28 4237 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 174.41 154.64 21762000 0 0 0 5959000 0 0 0 12708000 0 1464000 832250 0 798650 0 0 22110 763 20188 185750;185751;185752;185753;185754 148050;148051 148050 2 HQTVQLPR Unmodified 977.54066 0.54066282 4960 Q9UKA9 PTBP2 Polypyrimidine tract-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 26.649 26.866 2 0.0068957 28585 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 91.853 48.73 82487000 0 0 0 0 4033900 12586000 5333000 9293900 5009900 11798000 12374000 11111000 0 0 10949000 22111 4960 20189 185755;185756;185757;185758;185759;185760;185761;185762;185763;185764 148052;148053;148054;148055;148056 148055 5 HQTVQLPREGLDDQGLTK Unmodified 2034.0494 0.049416394 4960 Q9UKA9 PTBP2 Polypyrimidine tract-binding protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 5 2 1 2 62.509 56.502 3;4 9.507E-55 75974 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 146.81 136.88 213370000 161490000 24227000 27658000 0 0 0 0 0 0 0 0 0 0 0 0 22112 4960 20190 185765;185766;185767;185768;185769 148057;148058;148059;148060;148061;148062 148060 4 HQVEQLSSSLK Unmodified 1254.6568 0.65681479 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 30.29 30.43 2 0.00025625 33195 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 112.94 90.978 65872000 0 0 0 7145000 7314900 0 9105100 0 0 10769000 0 15020000 0 0 16518000 22113 2459 20191 185770;185771;185772;185773;185774;185775;185776;185777;185778;185779 148063;148064;148065;148066;148067;148068;148069;148070;148071;148072;148073 148065 11 HQVEYLGLK Unmodified 1085.5869 0.58694431 2215 Q12965 MYO1E Unconventional myosin-Ie no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.12 3.26 2 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44.847 43.585 2 2.5953E-07 56231 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 160.59 85.374 905180000 380460000 8493300 320420000 13805000 9955700 20336000 12392000 12567000 9200800 13224000 16354000 29685000 17867000 10470000 29951000 22114 2215 20192 185780;185781;185782;185783;185784;185785;185786;185787;185788;185789;185790;185791;185792;185793;185794;185795 148074;148075;148076;148077;148078;148079;148080;148081;148082;148083;148084;148085;148086;148087;148088;148089;148090;148091 148084 17 HQVSVEGTNQTDVK Unmodified 1540.7481 0.74814899 2427 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 20.849 19.92 3 5.6594E-24 25752 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.76 99.957 180020000 5588100 104990000 4673400 4654300 2746900 5071000 4371900 4509600 4033100 5958800 0 9218800 6980000 6009500 11216000 22115 2427 20193 185796;185797;185798;185799;185800;185801;185802;185803;185804;185805;185806;185807;185808;185809;185810 148092;148093;148094;148095;148096;148097;148098;148099;148100;148101;148102;148103;148104 148095 12 HQVYPEYVIQYTTSSK Unmodified 1941.9472 0.94724273 4330 Q9H0J9 PARP12 Poly [ADP-ribose] polymerase 12 yes yes 0 0 0 By MS/MS 2 0 1 1 78.072 69.942 3 8.5771E-05 92024 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.279 55.791 11516000 11516000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22116 4330 20194 185811 148105 148105 1 HQYINEDEYEVNLK Unmodified 1792.8268 0.82679325 3702 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 58.979 58.717 3 0.00024244 65939 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.527 46.682 119410000 0 1626600 0 4547500 4269600 10732000 4969800 7526800 5679700 10691000 11249000 12717000 8787000 8568300 28046000 22117 3702 20195 185812;185813;185814;185815;185816;185817;185818;185819;185820;185821;185822;185823;185824 148106;148107;148108;148109;148110;148111;148112;148113;148114;148115 148109 9 HQYPDGEVWK Unmodified 1257.5778 0.57783619 3054 Q7L5Y1 ENOSF1 Mitochondrial enolase superfamily member 1 yes yes 0 0 0 By MS/MS 2 0 1 1 42.796 39.074 2 0.017458 49309 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 66.435 51.053 4546900 0 0 4546900 0 0 0 0 0 0 0 0 0 0 0 0 22118 3054 20196 185825 148116;148117 148116 2 HQYPDGEVWKK Unmodified 1385.6728 0.67279921 3054 Q7L5Y1 ENOSF1 Mitochondrial enolase superfamily member 1 yes yes 0 0 1 By MS/MS By matching 2 0 2 1 1 37.724 32.721 3 0.014388 45764 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 37.968 33.624 14845000 11834000 0 3011500 0 0 0 0 0 0 0 0 0 0 0 0 22119 3054 20197 185826;185827 148118 148118 1 HQYYNLK Unmodified 964.47667 0.47666558 992 P13984 GTF2F2 General transcription factor IIF subunit 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 27.742 23.428 2 0.014551 33364 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 139.92 109.73 480200000 403720000 0 76480000 0 0 0 0 0 0 0 0 0 0 0 0 22120 992 20198 185828;185829 148119;148120 148119 1 HRAFEDEMSGR Unmodified 1333.5833 0.58333227 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 21.751 22.407 3 0.044873 22467 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.083 39.717 27052000 0 0 0 0 0 0 0 0 0 0 0 8390200 0 0 18662000 22121 2047 20199 185830;185831 148121 148121 0 HRAQVIYTR Unmodified 1142.6309 0.63087481 1917 P62851 RPS25 40S ribosomal protein S25 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 14.674 15.07 3 0.0047129 13534 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.005 47.338 75104000 0 0 0 0 0 0 0 0 0 0 21981000 0 19498000 0 33626000 22122 1917 20200 185832;185833;185834 148122;148123 148122 2 HRATGEGGASDLPEDPDEDAIPIT Unmodified 2462.1197 0.11974038 293 O15541 RNF113A RING finger protein 113A yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 74.388 68.781 3 6.2105E-12 89497 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.152 61.792 30856000 18355000 0 12501000 0 0 0 0 0 0 0 0 0 0 0 0 22123 293 20201 185835;185836 148124;148125;148126 148124 3 HRDYETATLSDIK Unmodified 1547.758 0.7579854 356 O43707 ACTN4 Alpha-actinin-4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.68 3.96 1 9 2 10 6 3 3 1 1 1 1 1 1 1 1 1 1 47.467 45.168 2;3;4 5.5341E-19 42308 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 132.86 110.8 2424100000 1648700000 326190000 84956000 0 0 63186000 6931800 12478000 0 25366000 62261000 90150000 28680000 51004000 24173000 22124 356 20202 185837;185838;185839;185840;185841;185842;185843;185844;185845;185846;185847;185848;185849;185850;185851;185852;185853;185854;185855;185856;185857;185858 148127;148128;148129;148130;148131;148132;148133;148134;148135;148136;148137;148138;148139;148140;148141;148142;148143;148144;148145;148146;148147;148148;148149;148150;148151;148152;148153;148154;148155;148156 148132 29 HREELSDYEER Unmodified 1461.6484 0.64843495 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 22.476 22.728 3 0.042098 22661 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 33.195 30.752 66066000 0 0 0 2235500 0 3785400 2791500 2805000 2688200 3061200 5556100 11527000 11246000 8363700 12007000 22125 2556 20203 185859;185860;185861;185862;185863;185864;185865;185866;185867;185868;185869 148157 148157 1 HRELIMGEDPAQPRK Unmodified 1775.9101 0.91008614 2201 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes yes 0 0 2 By MS/MS By matching 10 0 2 1 1 34.582 34.75 4 0.037182 38207 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 29.618 24.409 32645000 0 0 0 0 0 14276000 0 0 0 0 0 0 18369000 0 0 22126 2201 20204 185870;185871 148158 148158 1 HRGSADYSMEAK Oxidation (M) 1366.5936 0.59356261 2104 Q04726 TLE3 Transducin-like enhancer protein 3 yes yes 0 1 1 By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS 7.09 3.85 4 7 2 2 1 1 1 1 1 1 1 6.5377 5.529 2;3 1.6919E-05 7280 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 118.28 101.25 158900000 118700000 0 4894700 2809000 3437300 3600700 6975900 3860400 0 6679200 0 0 0 7934900 0 22127 2104 20205 185872;185873;185874;185875;185876;185877;185878;185879;185880;185881;185882 148159;148160;148161;148162 148160 3408 3 HRGSADYSMEAK Unmodified 1350.5986 0.59864799 2104 Q04726 TLE3 Transducin-like enhancer protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 10.991 11.272 3 0.0030645 10462 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 58.04 51.747 39225000 0 0 0 0 0 0 0 0 0 0 0 11447000 6913800 5198600 15666000 22128 2104 20205 185883;185884;185885;185886 148163;148164;148165 148165 2 HRLTEEGQEK Unmodified 1225.6051 0.60511357 4327 Q9H0G5 NSRP1 Nuclear speckle splicing regulatory protein 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6.2782 5.9693 3 0.0064102 7316 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.515 30.959 174300000 129610000 0 8157200 2534900 3629400 2966400 4274100 2334000 3821500 2078800 2976300 3893900 1573000 1981400 4467100 22129 4327 20206 185887;185888;185889;185890;185891;185892;185893;185894;185895;185896;185897;185898;185899;185900 148166;148167;148168;148169;148170 148168 5 HRNSADYSSESK Unmodified 1379.6066 0.60657014 2105 Q04727 TLE4 Transducin-like enhancer protein 4 yes yes 0 0 1 By MS/MS 2 0 1 1 6.0449 2.6127 2 0.0018025 5584 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 102.52 56.062 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22130 2105 20207 185901 148171 148171 1 HRPELIDYGK Unmodified 1226.6408 0.6407708 971 P12814 ACTN1 Alpha-actinin-1 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 32.672 33.394 3 0.0095363 35603 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.827 67.507 56972000 0 0 0 0 0 0 0 0 0 0 0 11596000 0 0 45377000 22131 971 20208 185902;185903 148172;148173 148172 0 HRPELIEYDK Unmodified 1298.6619 0.66190017 356 O43707 ACTN4 Alpha-actinin-4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 2 2 1 2 2 33.064 33.407 2;3 0.00097142 35170 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 87.568 80.113 483870000 0 0 0 11954000 0 44569000 0 10396000 11357000 18594000 71427000 52329000 17862000 44162000 201220000 22132 356 20209 185904;185905;185906;185907;185908;185909;185910;185911;185912;185913;185914;185915;185916;185917 148174;148175;148176;148177;148178;148179;148180;148181;148182;148183;148184 148183 9 HRPQLLVER Unmodified 1146.6622 0.66217494 1528 P47897 QARS Glutamine--tRNA ligase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 29.496 29.826 3 0.0078201 30416 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.665 72.146 235670000 0 0 0 0 0 29558000 0 14838000 17184000 8034900 10092000 40059000 8985100 13576000 93347000 22133 1528 20210 185918;185919;185920;185921;185922;185923;185924;185925;185926 148185;148186;148187;148188 148186 1 HRPSEADEEELAR Unmodified 1537.7121 0.71209784 193 O14617 AP3D1 AP-3 complex subunit delta-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.234 20.435 3 1.4475E-41 19814 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 142.1 121.68 397840000 0 0 0 29275000 19642000 51906000 28758000 25931000 38940000 34869000 27226000 34062000 44742000 29354000 33137000 22134 193 20211 185927;185928;185929;185930;185931;185932;185933;185934;185935;185936;185937;185938 148189;148190;148191;148192;148193;148194;148195;148196;148197;148198;148199;148200;148201;148202;148203 148198 14 HRPTCETLEK Unmodified 1269.6136 0.61356977 2993 Q6XZF7 DNMBP Dynamin-binding protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 9.6167 9.6728 3 0.021417 7997 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 34.692 18.555 38117000 0 0 0 7403700 2923800 2793800 5545800 3556200 0 4101700 0 0 6875800 4916100 0 22135 2993 20212 185939;185940;185941;185942;185943;185944;185945;185946 148204;148205;148206 148205 2 HRQVGNAVPPPLAK Unmodified 1482.8419 0.84193022 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 33.767 33.922 3 0.0027318 37145 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 38.366 14.655 61372000 0 0 0 0 3324800 6311900 8943200 6470100 4491300 6355000 11289000 0 0 0 14186000 22136 1201 20213 185947;185948;185949;185950;185951;185952;185953;185954 148207;148208;148209;148210;148211;148212 148207 6 HRTMSQEFSK Unmodified 1249.5874 0.58735502 2816 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 14.305 14.051 3 0.0072626 21572 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.786 42.722 87745000 28894000 0 0 0 0 4597900 432560 0 3816100 6447600 3238900 10622000 12228000 4409100 13058000 22137 2816 20214 185955;185956;185957;185958;185959;185960;185961;185962;185963;185964 148213;148214 148213 2 HRTMSQEFSK Oxidation (M) 1265.5823 0.58226964 2816 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 0 1 1 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 6.4302 6.5368 3 0.011422 4691 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 42.161 13.956 45859000 0 0 0 3065900 3032600 0 5504300 4634400 0 0 7874600 8064500 8723400 0 4959200 22138 2816 20214 185965;185966;185967;185968;185969;185970;185971;185972 148215 148215 4454 1 HRVIGSGCNLDSAR Unmodified 1540.7529 0.75285722 836 P07195 LDHB L-lactate dehydrogenase B chain yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 22.935 23.263 3 0.00023213 22799 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.222 67.477 266020000 0 0 0 0 0 2939300 0 3900000 2162400 2817800 27568000 55407000 8512000 37618000 125090000 22139 836 20215 185973;185974;185975;185976;185977;185978;185979;185980;185981 148216;148217;148218;148219 148216 3 HRVQELGHGCAALVTK Unmodified 1774.9261 0.92607056 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 2 1 1 2 34.047 34.64 3;4 0.016083 36996 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 30.945 24.216 207490000 0 0 0 0 0 0 0 0 0 0 0 42805000 32528000 22538000 109620000 22140 5187 20216 185982;185983;185984;185985;185986;185987 148220;148221;148222 148221 2 HSAAATALPLSHGAAR Unmodified 1529.8063 0.806273 497 O75420 GIGYF1 PERQ amino acid-rich with GYF domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 33.51 33.549 3 0.00050184 36615 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 58.079 53.53 81650000 0 0 0 7217000 6848400 0 9353500 8340600 8504800 15198000 0 0 17351000 8835700 0 22141 497 20217 185988;185989;185990;185991;185992;185993;185994;185995 148223;148224;148225;148226;148227;148228;148229;148230;148231;148232 148229 10 HSAEAIALEQSR Unmodified 1310.6579 0.65787742 3912 Q96KQ7 EHMT2 Histone-lysine N-methyltransferase EHMT2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 31.921 32.131 3 0.0037519 33587 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.79 33.514 96117000 0 0 0 8435300 0 10501000 0 9033800 8304600 15698000 12511000 0 10896000 7755100 12983000 22142 3912 20218 185996;185997;185998;185999;186000;186001;186002;186003;186004 148233;148234;148235;148236;148237;148238 148235 5 HSAELIAMEK Oxidation (M) 1143.5594 0.55940893 392 O60293 ZFC3H1 Zinc finger C3H1 domain-containing protein yes yes 0 1 0 By MS/MS 2 0 1 1 25.07 22.109 2 0.0091454 27993 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 74.376 39.081 3681400 0 0 3681400 0 0 0 0 0 0 0 0 0 0 0 0 22143 392 20219 186005 148239;148240 148240 497 2 HSAELIAMEK Unmodified 1127.5645 0.56449431 392 O60293 ZFC3H1 Zinc finger C3H1 domain-containing protein yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 42.377 38.709 2 0.0014533 48820 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 110.87 68.763 7437000 0 0 7437000 0 0 0 0 0 0 0 0 0 0 0 0 22144 392 20219 186006;186007 148241;148242 148241 2 HSAESQILK Unmodified 1011.5349 0.53490874 1411 P40261 NNMT Nicotinamide N-methyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 17.469 17.098 2 0.0077155 15885 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 71.692 16.322 200420000 0 9421600 17023000 0 0 26877000 0 9720900 7526600 20684000 26535000 16740000 15332000 18192000 32367000 22145 1411 20220 186008;186009;186010;186011;186012;186013;186014;186015;186016;186017;186018;186019 148243;148244;148245;148246;148247;148248;148249;148250;148251;148252 148247 9 HSAGSGAEESNSSSTVQK Unmodified 1761.7765 0.77654859 3285 Q8IYL3 C1orf174 UPF0688 protein C1orf174 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.33 2 2 11 4 1 1 1 1 1 1 1 1 1 1 1 6.4095 5.6049 2;3 3.6249E-05 5446 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 56.817 48.64 56752000 0 35034000 0 1130000 2243600 1659500 1711900 1506700 2550400 1400400 0 3661800 1600100 1507500 2746000 22146 3285 20221 186020;186021;186022;186023;186024;186025;186026;186027;186028;186029;186030;186031;186032;186033;186034 148253;148254;148255;148256;148257;148258;148259 148257 7 HSASQDGQDTIR Unmodified 1313.596 0.59600545 78 CON__P20930;P20930 FLG Filaggrin yes no 0 0 0 By matching By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 7.4822 7.6254 2 0.0056245 5590 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 53.683 41.636 + 6170600 0 0 0 578960 0 0 0 0 0 2549800 0 0 1236000 0 1805900 22147 78 20222 186035;186036;186037;186038 148260;148261 148260 2 HSASQEGQDTIR Unmodified 1327.6117 0.61165551 78 CON__P20930;P20930 FLG Filaggrin yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 3 1 3 3 1 2 2 2 2 2 8.0559 8.1682 2;3 8.2944E-05 6211 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 71.176 57.212 + 81155000 0 0 0 10367000 5893400 981790 6620000 9195800 1858100 11609000 14278000 8651800 7040800 0 4659700 22148 78 20223 186039;186040;186041;186042;186043;186044;186045;186046;186047;186048;186049;186050;186051;186052;186053;186054;186055;186056;186057;186058;186059;186060;186061 148262;148263;148264;148265;148266;148267;148268;148269;148270;148271;148272;148273;148274 148263 12 HSASVSSATGTTEESRSVPQIK Unmodified 2258.1139 0.11386714 2648 Q2KHR2 RFX7 DNA-binding protein RFX7 yes yes 0 0 1 By MS/MS 2 0 1 1 41.171 37.562 3 0.0037014 47424 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 36.111 26.706 2879500 0 0 2879500 0 0 0 0 0 0 0 0 0 0 0 0 22149 2648 20224 186062 148275 148275 1 HSATPFLK Unmodified 899.4865 0.48650199 864 P08243 ASNS Asparagine synthetase [glutamine-hydrolyzing] yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 2 2 37.834 33.242 2 0.0096686 41243 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 113.89 51.172 2367600000 1657800000 247490000 462330000 0 0 0 0 0 0 0 0 0 0 0 0 22150 864 20225 186063;186064;186065;186066;186067 148276;148277;148278 148278 2 HSDLFSSSSPWDK Unmodified 1491.663 0.66302238 2840;5195 Q641Q2;Q9Y4E1 FAM21A;FAM21C WASH complex subunit FAM21A;WASH complex subunit FAM21C no no 0 0 0 By MS/MS By MS/MS By matching By MS/MS 6 4 2 2 1 1 1 1 66.059 63.256 3 0.021821 78526 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 26.532 14.949 25870000 12151000 0 5607100 0 0 0 0 0 0 0 0 0 0 3200400 4912200 22151 2840;5195 20226 186068;186069;186070;186071 148279;148280;148281;148282 148281 4 HSDPELLK Unmodified 937.4869 0.48689592 1583 P49643 PRIM2 DNA primase large subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 21.873 22.082 2 0.0060433 23257 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 104.21 64.106 147150000 0 0 0 5366300 5035700 10805000 8321700 0 6906400 13426000 18001000 25464000 17556000 10582000 25687000 22152 1583 20227 186072;186073;186074;186075;186076;186077;186078;186079;186080;186081;186082 148283;148284;148285;148286;148287;148288;148289;148290;148291;148292;148293 148283 11 HSDPESDFYR Unmodified 1251.5156 0.51562986 594 O94864 SUPT7L STAGA complex 65 subunit gamma yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 31.402 31.503 2 0.008766 34912 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 59.245 50.382 18810000 0 0 0 2020500 2213900 1799100 0 2532800 0 0 0 0 4393800 2525700 3324200 22153 594 20228 186083;186084;186085;186086;186087;186088;186089 148294;148295;148296 148296 3 HSDPESDFYRGK Unmodified 1436.6321 0.6320566 594 O94864 SUPT7L STAGA complex 65 subunit gamma yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 25.739 25.929 3 0.024395 26819 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 26.359 12.101 51061000 0 0 0 0 2695200 4715800 3875900 0 7414000 0 0 18776000 0 0 13584000 22154 594 20229 186090;186091;186092;186093;186094;186095 148297;148298 148298 2 HSDPTLPGTDSLPCSPPVSNSYTQADPMAPR Oxidation (M) 3310.4871 0.48705521 3008 Q6ZS17 FAM65A Protein FAM65A yes yes 0 1 0 By matching By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 75.264 75.415 3 4.2862E-13 87151 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 44.596 42.101 14743000 0 0 0 0 0 0 0 2734200 0 4424700 0 4873200 2710800 0 0 22155 3008 20230 186096;186097;186098;186099 148299;148300 148300 4616 1 HSEAATAQREEWK Unmodified 1541.7223 0.7222686 2365 Q14103 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 1 1 1 1 1 2 2 1 1 2 15.024 15.257 2;3 6.1247E-12 14590 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 124.48 108.46 573380000 0 0 0 11776000 6898600 15537000 12569000 15999000 15328000 26260000 76707000 89339000 50908000 66004000 186050000 22156 2365 20231 186100;186101;186102;186103;186104;186105;186106;186107;186108;186109;186110;186111;186112;186113;186114 148301;148302;148303;148304;148305;148306;148307;148308;148309;148310;148311 148302 5 HSELSELNVK Unmodified 1154.5932 0.5931519 3659;554 O75886;Q92783 STAM2;STAM Signal transducing adapter molecule 2;Signal transducing adapter molecule 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.89 3.41 3 2 13 2 2 1 1 1 1 1 1 1 1 1 1 1 1 2 40.157 38.86 2 9.4733E-61 50063 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 224.86 172.08 710160000 31108000 342830000 137110000 12448000 6570300 16965000 14580000 10875000 9101100 17438000 20519000 21133000 17651000 17582000 34254000 22157 554;3659 20232 186115;186116;186117;186118;186119;186120;186121;186122;186123;186124;186125;186126;186127;186128;186129;186130;186131;186132 148312;148313;148314;148315;148316;148317;148318;148319;148320;148321;148322;148323;148324;148325;148326;148327;148328 148324 16 HSENSLLLTK Unmodified 1140.6139 0.61388734 3595 Q8WXW3 PIBF1 Progesterone-induced-blocking factor 1 yes yes 0 0 0 By MS/MS 2 0 1 1 40.065 36.517 2 5.0876E-06 45993 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 127.4 66.808 10650000 0 0 10650000 0 0 0 0 0 0 0 0 0 0 0 0 22158 3595 20233 186133 148329;148330;148331 148330 3 HSETFTRDNNMGLVK Unmodified 1747.8312 0.83116712 5042 Q9UNS2 COPS3 COP9 signalosome complex subunit 3 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 49.054 42.322 3 1.516E-06 58082 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 100.31 91.272 248560000 225860000 22692000 0 0 0 0 0 0 0 0 0 0 0 0 0 22159 5042 20234 186134;186135 148332;148333 148333 2 HSETFTRDNNMGLVK Oxidation (M) 1763.8261 0.82608174 5042 Q9UNS2 COPS3 COP9 signalosome complex subunit 3 yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 34.153 29.344 3 0.00024701 41643 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.444 83.036 114540000 99810000 0 14732000 0 0 0 0 0 0 0 0 0 0 0 0 22160 5042 20234 186136;186137 148334;148335 148335 6390 2 HSEVQQANLK Unmodified 1152.5887 0.58873523 1358 P35606 COPB2 Coatomer subunit beta' yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.84 3.47 5 2 18 1 4 2 2 2 2 2 2 2 1 1 2 1 1 12.493 11.671 2;3 0 15488 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 319.06 241.78 1972900000 38420000 1309400000 215290000 18401000 21188000 26159000 26421000 32559000 23964000 39537000 30416000 76720000 0 38824000 75594000 22161 1358 20235 186138;186139;186140;186141;186142;186143;186144;186145;186146;186147;186148;186149;186150;186151;186152;186153;186154;186155;186156;186157;186158;186159;186160;186161;186162 148336;148337;148338;148339;148340;148341;148342;148343;148344;148345;148346;148347;148348;148349;148350;148351 148338 13 HSFINPQPK Unmodified 1066.556 0.55597854 4821 Q9P2K8 EIF2AK4 Eukaryotic translation initiation factor 2-alpha kinase 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 33.642 28.851 2 0.0039447 40829 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 114.89 75.352 66604000 62518000 0 4085600 0 0 0 0 0 0 0 0 0 0 0 0 22162 4821 20236 186163;186164;186165 148352;148353;148354;148355 148353 4 HSFTEDHYVEFSK Unmodified 1624.7158 0.71578623 5192 Q9Y4B6 VPRBP Protein VPRBP yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 49.587 48.357 3 0.00080348 53012 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.104 44.426 38266000 12302000 0 0 0 0 0 0 0 0 0 0 8972000 4164600 5054700 7772700 22163 5192 20237 186166;186167;186168;186169;186170 148356;148357;148358;148359 148356 4 HSGASAEVQKEEEK Unmodified 1527.7165 0.71651452 4035 Q99615 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 1 1 1 2 2 2 2 1 2 2 2 6.8496 7.0112 3 1.819E-100 4680 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 188.13 165.01 324390000 0 0 0 17626000 13379000 9512300 22170000 18036000 10845000 30452000 54966000 1874200 27322000 43056000 75147000 22164 4035 20238 186171;186172;186173;186174;186175;186176;186177;186178;186179;186180;186181;186182;186183;186184;186185;186186;186187;186188;186189 148360;148361;148362;148363;148364;148365;148366;148367;148368;148369 148361 9 HSGGFLSSPADFSQENK Unmodified 1806.8173 0.81729119 3061 Q7LBC6 KDM3B Lysine-specific demethylase 3B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 59.987 60.094 2;3 1.3654E-70 68361 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 208.27 188.66 727360000 0 0 0 33253000 29891000 50986000 47028000 65380000 44850000 55362000 71630000 82152000 67959000 58549000 120320000 22165 3061 20239 186190;186191;186192;186193;186194;186195;186196;186197;186198;186199;186200;186201;186202;186203;186204;186205;186206;186207;186208;186209;186210;186211;186212;186213 148370;148371;148372;148373;148374;148375;148376;148377;148378;148379;148380;148381;148382;148383;148384;148385;148386;148387;148388;148389 148374 4 HSGIDFK Unmodified 802.39735 0.39735263 2284 Q13418 ILK Integrin-linked protein kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 21.155 20.535 2 0.0165 26618 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 117.93 48.544 915760000 339430000 0 319200000 0 18791000 23035000 26465000 0 0 35243000 44686000 34886000 39657000 0 34368000 22166 2284 20240 186214;186215;186216;186217;186218;186219;186220;186221;186222;186223 148390;148391;148392 148391 3 HSGIGHGQASSAVR Unmodified 1362.6753 0.67525882 78 CON__P20930;P20930 FLG Filaggrin yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 2 1 1 1 1 1 1 7.9885 8.118 3 3.691E-50 6461 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 152.88 129.03 + 317460000 0 0 0 16012000 4952100 5092400 3828500 21158000 10898000 45886000 70514000 66030000 30331000 26923000 15839000 22167 78 20241 186224;186225;186226;186227;186228;186229;186230;186231;186232;186233;186234;186235;186236 148393;148394;148395;148396;148397;148398;148399;148400;148401;148402;148403;148404;148405 148403 13 HSGPNSADSANDGFVR Unmodified 1629.7132 0.71316047 1692 P52597 HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 36 3 3 3 3 3 3 3 3 3 3 3 3 25.027 25.23 2;3 7.2707E-50 27007 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 138.73 133.84 2304800000 0 0 0 90669000 142760000 154720000 147970000 142760000 116870000 240730000 213380000 265880000 226280000 204760000 358020000 22168 1692 20242 186237;186238;186239;186240;186241;186242;186243;186244;186245;186246;186247;186248;186249;186250;186251;186252;186253;186254;186255;186256;186257;186258;186259;186260;186261;186262;186263;186264;186265;186266;186267;186268;186269;186270;186271;186272 148406;148407;148408;148409;148410;148411;148412;148413;148414;148415;148416;148417;148418;148419;148420;148421;148422;148423;148424;148425;148426;148427;148428;148429;148430;148431;148432;148433;148434;148435;148436;148437;148438;148439;148440 148432 34 HSGSSHLPQQLK Unmodified 1317.6789 0.67894722 2148 Q08117 AES Amino-terminal enhancer of split yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.34 18.526 3 7.8693E-05 18920 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 87.184 65.157 352540000 0 0 0 15778000 11398000 22333000 19575000 21349000 20520000 29725000 33226000 64737000 38484000 19904000 55509000 22169 2148 20243 186273;186274;186275;186276;186277;186278;186279;186280;186281;186282;186283;186284 148441;148442;148443;148444;148445;148446;148447;148448;148449;148450;148451;148452;148453;148454 148442 12 HSGVDDMVLLSK Oxidation (M) 1315.6442 0.6442012 2215 Q12965 MYO1E Unconventional myosin-Ie yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 2 2 3 47.275 41.91 2;3 0.0011749 52628 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 121.61 81.985 127580000 9369400 38913000 79297000 0 0 0 0 0 0 0 0 0 0 0 0 22170 2215 20244 186285;186286;186287;186288;186289;186290;186291 148455;148456;148457;148458;148459 148459 3604 2 HSGVDDMVLLSK Unmodified 1299.6493 0.64928657 2215 Q12965 MYO1E Unconventional myosin-Ie yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.24 3.75 5 1 11 2 3 1 1 1 1 1 1 1 1 2 2 62.892 60.856 2;3 0.00028411 67746 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.831 46.449 196930000 33466000 67865000 40063000 2204700 0 3658900 3031400 4304700 0 3330600 4240900 4037500 8011100 0 22717000 22171 2215 20244 186292;186293;186294;186295;186296;186297;186298;186299;186300;186301;186302;186303;186304;186305;186306;186307;186308 148460;148461;148462;148463;148464;148465;148466;148467;148468;148469;148470;148471;148472;148473 148463 12 HSHAVSTAAMTR Unmodified 1267.6092 0.60915309 1663 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 12.85 12.965 2;3 0.0025972 12337 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 43.798 34.365 85844000 0 0 0 6307900 5479200 11311000 10790000 0 8834300 13760000 0 1635100 14821000 10729000 2177400 22172 1663 20245 186309;186310;186311;186312;186313;186314;186315;186316;186317;186318 148474;148475;148476;148477;148478;148479;148480;148481 148474 6 HSHAVSTAAMTR Oxidation (M) 1283.6041 0.60406772 1663 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes yes 0 1 0 By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 1 1 1 2 1 2 2 2 2 1 2 6.6683 6.8238 2;3 0.0010455 4942 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 59.731 51.766 154270000 0 0 0 793290 1476300 1567300 16033000 11757000 14948000 22761000 22232000 3672100 18131000 16481000 24413000 22173 1663 20245 186319;186320;186321;186322;186323;186324;186325;186326;186327;186328;186329;186330;186331;186332;186333;186334;186335;186336 148482;148483;148484;148485;148486;148487;148488;148489 148488 2673 6 HSHGEAPSVDADPK Unmodified 1445.6535 0.65352033 485 O75362 ZNF217 Zinc finger protein 217 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 16.413 13.137 3 0.011054 16371 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 40.552 32.577 19948000 4916700 0 15032000 0 0 0 0 0 0 0 0 0 0 0 0 22174 485 20246 186337;186338 148490;148491 148490 2 HSHSQLPVGTGNK Unmodified 1360.6848 0.68476088 412 O60563 CCNT1 Cyclin-T1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.44 3.98 4 5 2 1 1 1 1 1 1 1 17.362 15.772 2;3 1.4022E-10 24128 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 119.27 90.547 441530000 244320000 8276700 691670 0 0 11149000 0 0 0 28819000 58490000 23457000 0 0 66325000 22175 412 20247 186339;186340;186341;186342;186343;186344;186345;186346;186347 148492;148493;148494;148495;148496;148497 148495 4 HSILDTHGRK Unmodified 1162.6207 0.62070406 3116 Q7Z6K5 ARPIN Arpin yes yes 0 0 1 By matching By MS/MS By MS/MS 10 0 3 1 1 1 10.129 10.492 3 0.023774 8634 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 27.428 12.49 8119700 0 0 0 0 0 0 0 0 0 0 1025700 2704600 0 0 4389500 22176 3116 20248 186348;186349;186350 148498 148498 1 HSIQHVPGDIEQTSQEK Unmodified 1931.9337 0.93371793 3520 Q8TEU7 RAPGEF6 Rap guanine nucleotide exchange factor 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 33.279 33.48 3 0.00031471 36561 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 57.936 51.773 37551000 0 0 0 0 0 6198000 2497000 3772800 3085000 5605600 9758800 0 3251800 3381900 0 22177 3520 20249 186351;186352;186353;186354;186355;186356;186357;186358 148499;148500;148501;148502;148503;148504;148505 148500 7 HSISMPAMR 2 Oxidation (M) 1060.4794 0.47938447 2642 Q16890 TPD52L1 Tumor protein D53 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 8.2189 8.3437 2 0.040175 5383 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 43.769 25.507 106360000 0 0 0 5427700 4080100 3634200 4980700 5103600 0 9182200 24672000 20873000 12992000 7608700 7806900 22178 2642 20250 186359;186360;186361;186362;186363;186364;186365;186366;186367;186368;186369 148506 148506 0 HSISMPAMR Oxidation (M) 1044.4845 0.48446985 2642 Q16890 TPD52L1 Tumor protein D53 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 22.454 22.898 2 0.038681 23321 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 40.067 22.682 11473000 0 0 0 0 0 0 0 2396100 0 0 3263700 5813200 0 0 0 22179 2642 20250 186370;186371;186372 148507 148507 1 HSLALGSATEDK Unmodified 1227.6095 0.60953025 2756 Q5SRE5 NUP188 Nucleoporin NUP188 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 26.046 26.338 2 0.00011637 27470 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 103.08 85.843 46349000 0 0 0 1691100 0 7094400 0 4389900 0 5337400 4396200 6344800 6741700 2652400 7700600 22180 2756 20251 186373;186374;186375;186376;186377;186378;186379;186380;186381 148508;148509;148510;148511;148512;148513;148514;148515 148514 8 HSLGLPR Unmodified 778.44497 0.44497152 4872 Q9UER7 DAXX Death domain-associated protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 27.105 27.204 2 0.031031 28995 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 74.191 48.572 193580000 0 0 0 21763000 18615000 27166000 20488000 13774000 15951000 23051000 0 0 24439000 0 28333000 22181 4872 20252 186382;186383;186384;186385;186386;186387;186388;186389;186390 148516 148516 1 HSLGSVQSTATQSNVEK Unmodified 1771.8701 0.87005504 4925 Q9UIF8 BAZ2B Bromodomain adjacent to zinc finger domain protein 2B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 2 1 58.735 58.126 2 0.00036429 66122 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 61.344 39.972 160140000 0 34476000 0 0 0 5700900 8228500 5898600 4439800 16065000 16485000 15918000 13718000 24918000 14293000 22182 4925 20253 186391;186392;186393;186394;186395;186396;186397;186398;186399;186400;186401;186402;186403 148517;148518;148519;148520;148521;148522;148523;148524 148524 8 HSLLQTLYK Unmodified 1101.6182 0.61824444 1495 P46060 RANGAP1 Ran GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 59.443 59.579 2 0.0037572 68054 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 89.029 62.336 24262000 0 0 0 0 0 8307700 0 0 4482900 5646300 0 0 5824900 0 0 22183 1495 20254 186404;186405;186406;186407;186408 148525;148526;148527;148528;148529 148525 5 HSLNSSSASTTEPDFQK Unmodified 1834.8333 0.83333519 1464 P42704 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 33.635 32.56 3 9.6577E-29 35163 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 87.388 82.907 304800000 7904200 149420000 32982000 8126500 6310200 11280000 5744300 6110700 5177800 13164000 10974000 16728000 9865700 7476400 13543000 22184 1464 20255 186409;186410;186411;186412;186413;186414;186415;186416;186417;186418;186419;186420;186421;186422;186423;186424 148530;148531;148532;148533;148534;148535;148536;148537;148538;148539 148538 9 HSLPSAYR Unmodified 929.47191 0.47191456 2200 Q12872 SFSWAP Splicing factor, suppressor of white-apricot homolog yes yes 0 0 0 By MS/MS 10 0 1 1 19.472 20.094 2 0.041997 20198 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 78.178 19.491 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22185 2200 20256 186425 148540 148540 1 HSLPSGLGLSETQITSHGFDNTK Unmodified 2425.1874 0.18736644 1712 P53367 ARFIP1 Arfaptin-1 yes yes 0 0 0 By MS/MS 2 0 2 2 79.466 71.335 3;4 1.837E-81 93674 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 144.92 137.11 111760000 111760000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22186 1712 20257 186426;186427 148541;148542 148541 1 HSLSGSSPGMK Unmodified 1086.5128 0.51279309 5066 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 11.564 11.739 2 0.0060271 10787 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 57.59 41.446 15474000 0 0 0 0 0 1623900 1277400 0 1665300 2204000 0 3133100 2145300 0 3425200 22187 5066 20258 186428;186429;186430;186431;186432;186433;186434;186435;186436 148543;148544;148545;148546;148547;148548 148547 5 HSMLFIEASAK Oxidation (M) 1248.6173 0.61725816 4536 Q9NP72 RAB18 Ras-related protein Rab-18 yes yes 0 1 0 By MS/MS 2 0 1 1 56.288 48.14 2 0.0070697 65898 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.276 53.073 5635700 5635700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22188 4536 20259 186437 148549 148549 5954 1 HSMNILNR Unmodified 983.49708 0.49708345 4655;5016 Q9NUU7;Q9UMR2 DDX19A;DDX19B ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX19B no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 31.194 31.27 2 0.0060224 32418 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 118.89 88.283 86961000 0 0 0 9340800 8364100 0 13141000 0 7414600 0 0 0 19934000 0 28767000 22189 4655;5016 20260 186438;186439;186440;186441;186442;186443 148550;148551;148552;148553;148554;148555 148551 6 HSMQTPVR Oxidation (M) 970.46545 0.46544897 4973 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 5.9597 6.0971 2 0.006914 3825 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 79.469 41.23 41652000 0 0 0 0 2532800 3197000 1421800 0 2824900 4357800 4932800 4807900 5997500 5236400 6342700 22190 4973 20261 186444;186445;186446;186447;186448;186449;186450;186451;186452;186453 148556;148557;148558;148559;148560;148561;148562;148563 148556 6320 8 HSMQTPVR Unmodified 954.47053 0.47053435 4973 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 11.77 11.917 2 0.040979 11042 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 50.127 18.837 58008000 0 0 0 2692100 3303100 4020900 2361600 3168800 3249400 5066100 4635400 5527100 7201600 6273700 10509000 22191 4973 20261 186454;186455;186456;186457;186458;186459;186460;186461;186462;186463;186464;186465 148564 148564 1 HSNLITVPIQDDSNSGAR Unmodified 1922.9446 0.94461697 3033 Q75N03 CBLL1 E3 ubiquitin-protein ligase Hakai yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 60.127 60.226 3 0.0017079 68758 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 27.892 5.417 45560000 0 0 0 4801200 0 3935400 0 4626400 7590100 5481100 0 0 5310500 6429900 7385500 22192 3033 20262 186466;186467;186468;186469;186470;186471;186472;186473 148565;148566;148567;148568 148566 4 HSNSNSVDDTIVALNMR Unmodified 1871.8796 0.87957387 1707 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 2 1 1 1 1 2 1 1 2 2 69.195 69.31 2;3 9.2054E-19 79301 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 102.08 99.94 132350000 0 0 0 0 4832900 8973600 3694300 8601500 7742700 13704000 0 23059000 8774800 14868000 38098000 22193 1707 20263 186474;186475;186476;186477;186478;186479;186480;186481;186482;186483;186484;186485;186486;186487 148569;148570;148571;148572;148573;148574;148575;148576;148577 148577 9 HSNSNSVDDTIVALNMR Oxidation (M) 1887.8745 0.8744885 1707 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 57.491 57.48 3 6.7947E-05 65506 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 65.105 59.201 135630000 0 0 0 17994000 15907000 0 0 36152000 0 0 27446000 38129000 0 0 0 22194 1707 20263 186488;186489;186490;186491;186492 148578;148579;148580;148581 148578 2757 4 HSPAPPPDPGFPAPSPPPADSPSEGFSLK Unmodified 2879.3766 0.37662377 3012 Q6ZSZ5 ARHGEF18 Rho guanine nucleotide exchange factor 18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.54 79.642 3 8.2432E-19 91805 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 59.661 54.001 116630000 0 0 0 0 12470000 11617000 6082700 9079300 7635800 9739600 12958000 12222000 8595800 7583900 18646000 22195 3012 20264 186493;186494;186495;186496;186497;186498;186499;186500;186501;186502;186503 148582;148583;148584;148585;148586;148587;148588;148589;148590;148591;148592;148593;148594;148595;148596 148584 15 HSPATISSSTR Unmodified 1142.568 0.56799978 255 O15119 TBX3 T-box transcription factor TBX3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 32 2 3 3 3 3 3 3 1 3 3 3 2 9.7874 9.9084 2;3 0.00050591 8981 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 89.047 31.87 245220000 0 0 0 9920700 13011000 13959000 20081000 15990000 15271000 18723000 22722000 35714000 28242000 24467000 27122000 22196 255 20265 186504;186505;186506;186507;186508;186509;186510;186511;186512;186513;186514;186515;186516;186517;186518;186519;186520;186521;186522;186523;186524;186525;186526;186527;186528;186529;186530;186531;186532;186533;186534;186535 148597;148598;148599;148600;148601;148602;148603;148604;148605;148606;148607;148608 148606 8 HSPDTAEGQLK Unmodified 1181.5677 0.56766543 2966 Q6R327 RICTOR Rapamycin-insensitive companion of mTOR yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 11.415 11.741 2 0.0029539 9735 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 65.305 45.528 31392000 0 0 0 0 0 0 0 0 0 0 3238500 8649000 5540200 5671100 8293600 22197 2966 20266 186536;186537;186538;186539;186540;186541;186542 148609;148610;148611 148611 3 HSPEDPEK Unmodified 937.41412 0.4141249 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching 6.33 3.68 1 2 3 1 2 1 1 1 5.7368 4.0993 2 0.0050462 4546 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145.34 110.45 3125500000 1885200 3119200000 0 0 0 2933200 0 0 0 1457100 0 0 0 65365 0 22198 1986 20267 186543;186544;186545;186546;186547;186548 148612;148613;148614;148615 148613 4 HSPLTQMGPAK Unmodified 1165.5914 0.59137776 5113 Q9Y2Q9 MRPS28 28S ribosomal protein S28, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.029 28.223 2 0.00018649 29071 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.79 63.98 72896000 0 0 0 3342900 5397100 3673000 3645200 4718900 3439800 6643200 10616000 7385200 7450800 6812600 9771400 22199 5113 20268 186549;186550;186551;186552;186553;186554;186555;186556;186557;186558;186559;186560 148616;148617;148618;148619;148620;148621;148622;148623;148624;148625;148626 148619 11 HSPLTQMGPAK Oxidation (M) 1181.5863 0.58629239 5113 Q9Y2Q9 MRPS28 28S ribosomal protein S28, mitochondrial yes yes 0 1 0 By MS/MS 10 0 1 1 13.898 14.407 2 0.043259 13496 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 50.805 34.028 4819500 0 0 0 0 0 0 0 0 0 0 4819500 0 0 0 0 22200 5113 20268 186561 148627 148627 0 HSPMVAK Unmodified 768.39524 0.39524414 1171 P23921 RRM1 Ribonucleoside-diphosphate reductase large subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.12 3.72 4 2 10 2 2 2 1 1 1 1 1 1 1 1 1 1 6.8241 5.7399 2 0.014551 6908 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 139.92 89.607 6106500000 4113300000 1017400000 950080000 2466800 2044300 4404900 3506300 3228500 2517000 1781500 0 0 1372000 1322400 3014200 22201 1171 20269 186562;186563;186564;186565;186566;186567;186568;186569;186570;186571;186572;186573;186574;186575;186576;186577 148628;148629;148630;148631;148632;148633 148629 6 HSPMVAK Oxidation (M) 784.39016 0.39015876 1171 P23921 RRM1 Ribonucleoside-diphosphate reductase large subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 2 1 2 3.2044 0.30849 2 0.024901 2875 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.793 30.121 413020000 342950000 2884800 67185000 0 0 0 0 0 0 0 0 0 0 0 0 22202 1171 20269 186578;186579;186580;186581;186582 148634;148635;148636;148637;148638;148639;148640;148641 148636 8 HSPNLSFEPNFCQDNPR Unmodified 2057.9014 0.90137195 3134 Q86TC9 MYPN Myopalladin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 67.665 67.886 3 9.8464E-19 78458 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 101.9 97.279 101150000 0 0 0 0 0 9469400 0 8849400 6909700 9522000 14650000 17970000 7686200 10923000 15170000 22203 3134 20270 186583;186584;186585;186586;186587;186588;186589;186590;186591 148642;148643;148644;148645;148646;148647;148648;148649;148650;148651;148652;148653;148654;148655 148654 14 HSQAVEELAEQLEQTK Unmodified 1838.901 0.90102082 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.8 8 2 16 3 4 3 1 1 1 3 2 2 1 1 1 1 2 77.344 76.286 2;3 4.4731E-39 96747 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 137.61 120.11 1669700000 343880000 705110000 149290000 0 15129000 48286000 8262200 44237000 32308000 55764000 40113000 55910000 24053000 23628000 123770000 22204 1356 20271 186592;186593;186594;186595;186596;186597;186598;186599;186600;186601;186602;186603;186604;186605;186606;186607;186608;186609;186610;186611;186612;186613;186614;186615;186616;186617 148656;148657;148658;148659;148660;148661;148662;148663;148664;148665;148666;148667;148668;148669;148670;148671;148672;148673;148674;148675;148676;148677;148678;148679;148680;148681;148682;148683;148684;148685;148686;148687;148688;148689 148670 32 HSQCSEAIITVLCGTEGAQDGLSK Unmodified 2560.1898 0.18975098 3992 Q96SN8 CDK5RAP2 CDK5 regulatory subunit-associated protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 82.995 80.533 3 0.0098862 97655 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 19.113 15.585 2653700 0 0 2653700 0 0 0 0 0 0 0 0 0 0 0 0 22205 3992 20272 186618 148690 148690 0 HSQEELLQR Unmodified 1138.5731 0.57308516 2927 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 23.099 23.35 2 0.0078297 24808 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 71.379 29.727 228680000 0 0 0 18036000 0 10824000 8543000 9798600 5313800 12979000 8874300 18799000 15064000 14508000 105940000 22206 2927 20273 186619;186620;186621;186622;186623;186624;186625;186626;186627;186628;186629 148691;148692;148693 148692 1 HSQELPAILDDTTLSGSDR Unmodified 2053.9916 0.99162674 2476 Q15021 NCAPD2 Condensin complex subunit 1 yes yes 0 0 0 By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 77.957 78.049 3 5.7048E-06 89678 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.122 53.929 47415000 0 0 0 0 4165100 6886900 0 0 3569900 5713100 4575900 5735000 0 5615300 11154000 22207 2476 20274 186630;186631;186632;186633;186634;186635;186636;186637 148694;148695;148696 148695 3 HSQELTNEK Unmodified 1084.5149 0.51490158 2977 Q6UVJ0 SASS6 Spindle assembly abnormal protein 6 homolog yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 6.6726 3.733 2 4.3271E-16 5705 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 195.58 108.4 58432000 0 53748000 4684000 0 0 0 0 0 0 0 0 0 0 0 0 22208 2977 20275 186638;186639;186640 148697;148698;148699 148697 3 HSQEQGSGGQASAASNPPSFFTTPTSDGAFELAPT Unmodified 3478.5549 0.55493508 4072 Q99956 DUSP9 Dual specificity protein phosphatase 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 88.309 88.415 3 0.0012382 102657 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 21.275 19.485 23632000 0 0 0 0 1747100 1749200 1052900 2389500 1771400 4635900 3363900 3720100 0 3202300 0 22209 4072 20276 186641;186642;186643;186644;186645;186646;186647;186648;186649 148700;148701 148700 2 HSQFIGYPITLFVEK Unmodified 1777.9403 0.94030686 850 P07900;Q58FG0 HSP90AA1;HSP90AA5P Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 5.25 3.7 3 2 3 1 4 1 2 94.167 91.19 2;3 0.0010072 115891 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.489 53.027 101150000 20002000 60075000 0 0 0 1507900 0 0 0 0 0 0 0 0 19567000 22210 850 20277 186650;186651;186652;186653;186654;186655;186656;186657 148702;148703;148704;148705;148706;148707;148708 148703 7 HSQFLGYPITLYLEK Unmodified 1807.9509 0.95087155 2716 Q58FF8 HSP90AB2P Putative heat shock protein HSP 90-beta 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.64 3.79 5 3 6 4 4 1 1 1 1 1 1 90.909 88.454 2;3 3.5051E-58 112383 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 211.51 0 267040000 61371000 162270000 0 0 0 2978700 0 0 912870 1883200 1986000 0 0 951350 34687000 22211 2716 20278 186658;186659;186660;186661;186662;186663;186664;186665;186666;186667;186668;186669;186670;186671 148709;148710;148711;148712;148713;148714;148715;148716;148717;148718;148719;148720 148710 11 HSQNGFIVPPPPEK Unmodified 1545.794 0.79397698 2323 Q13596 SNX1 Sorting nexin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.94 3.84 6 1 11 2 3 2 1 1 1 1 1 1 1 1 1 1 1 55.703 53.527 2;3 2.7885E-29 71129 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 149.96 124.34 423180000 52556000 244450000 46851000 6366900 3423000 6625400 5804500 4794400 0 9367700 9789400 9130000 6459100 4387000 13177000 22212 2323 20279 186672;186673;186674;186675;186676;186677;186678;186679;186680;186681;186682;186683;186684;186685;186686;186687;186688;186689 148721;148722;148723;148724;148725;148726;148727;148728;148729;148730;148731;148732;148733;148734;148735;148736;148737;148738;148739 148724 19 HSQPATPTPLQSR Unmodified 1418.7266 0.72662569 4585 Q9NR12 PDLIM7 PDZ and LIM domain protein 7 yes yes 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 27.17 27.662 2 0.0069439 29480 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 58.37 36.624 21694000 0 0 0 0 0 0 0 0 0 0 7198100 0 0 3687100 10809000 22213 4585 20280 186690;186691;186692 148740 148740 1 HSQPIPK Unmodified 805.44464 0.44463717 172 O00625 PIR Pirin yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 7 3.87 3 5 1 1 1 1 1 1 1 1 7.6897 6.6403 2 0.025177 4468 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.297 47.558 3039100000 1299800 1720700000 1305200000 0 0 710390 1989100 0 0 0 0 1691700 0 1643600 5896500 22214 172 20281 186693;186694;186695;186696;186697;186698;186699;186700 148741;148742 148742 2 HSQPSPEPHSPTEPPAWGSSIVK Unmodified 2451.1819 0.18188713 2830 Q5VZ89 DENND4C DENN domain-containing protein 4C yes yes 0 0 0 By MS/MS 2 0 1 1 70.937 62.671 3 0.060251 83493 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 36.627 28.929 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22215 2830 20282 186701 148743 148743 1 HSSDASSLLPQNILSQTSR Unmodified 2040.0236 0.023595574 4138 Q9BTA9 WAC WW domain-containing adapter protein with coiled-coil yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 78.306 78.32 3 0.0015072 90046 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.868 42.219 54651000 0 0 0 4795000 0 14841000 7154900 17316000 10544000 0 0 0 0 0 0 22216 4138 20283 186702;186703;186704;186705;186706;186707 148744;148745;148746;148747;148748 148746 5 HSSEATEVNPESLAK Unmodified 1597.7584 0.75837933 297 O43149 ZZEF1 Zinc finger ZZ-type and EF-hand domain-containing protein 1 yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 46.21 40.967 2;3 3.4113E-31 53705 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 132.59 111.75 47924000 0 47924000 0 0 0 0 0 0 0 0 0 0 0 0 0 22217 297 20284 186708;186709;186710 148749;148750;148751 148750 3 HSSETFSSTTTVTPVSPSFAHNPK Unmodified 2545.2085 0.20849581 5203 Q9Y4H2 IRS2 Insulin receptor substrate 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 58.808 59.132 4 0.00033044 67468 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 33.794 30.953 31178000 0 0 0 0 0 4289500 0 0 0 6952100 0 8034100 0 0 11902000 22218 5203 20285 186711;186712;186713;186714 148752;148753 148752 2 HSSGGGSRGGSSSGGGYGSGGGGSSSVK Unmodified 2312.9966 0.99660555 79 CON__P35908v2;P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 0 1 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 6.5083 5.9882 3;4 1.6105E-100 4389 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 129.27 125.85 + 402100000 58309000 0 1181400 22503000 8500800 21510000 9592600 24985000 10385000 10119000 23810000 148330000 25017000 29491000 8369900 22219 79 20286 186715;186716;186717;186718;186719;186720;186721;186722;186723;186724;186725;186726;186727;186728;186729 148754;148755;148756;148757;148758;148759;148760;148761;148762;148763;148764;148765;148766;148767;148768 148767 15 HSSGIVADLSEQSLK Unmodified 1569.7999 0.79985021 2535 Q15435 PPP1R7 Protein phosphatase 1 regulatory subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 5.2 3.92 6 4 2 2 2 1 1 2 67.061 63.655 2;3 2.7708E-12 78968 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 113.37 100.49 291590000 27896000 159980000 77478000 0 0 8580000 0 0 0 0 2742100 0 0 0 14915000 22220 2535 20287 186730;186731;186732;186733;186734;186735;186736;186737;186738;186739 148769;148770;148771;148772;148773;148774;148775;148776;148777;148778 148776 9 HSSGQQNLNTITYETLK Unmodified 1932.9541 0.95411902 519 O75575 CRCP DNA-directed RNA polymerase III subunit RPC9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 6.17 3.85 2 1 3 1 1 1 1 1 1 61.244 58.653 3 3.5555E-26 73674 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 99.569 89.512 52686000 6141600 4855800 15450000 0 0 0 2090500 0 0 0 0 14211000 0 0 9937300 22221 519 20288 186740;186741;186742;186743;186744;186745 148779;148780;148781;148782;148783;148784 148784 6 HSSGSSNTSTANRSTHNELEK Unmodified 2243.0163 0.016278364 1626 P50539 MXI1 Max-interacting protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 9.9759 6.2012 4 0.00058278 10253 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.668 48.853 25917000 25917000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22222 1626 20289 186746 148785 148785 1 HSSLAGCQIINYR Unmodified 1517.7409 0.74089555 2040 Q00610 CLTC Clathrin heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 51.15 51.484 3 0.047726 58169 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 37.613 30.243 172050000 0 0 0 0 0 14663000 13195000 0 0 13992000 19212000 25080000 0 28266000 57642000 22223 2040 20290 186747;186748;186749;186750;186751;186752;186753 148786 148786 0 HSSLFVK Unmodified 816.44939 0.4493882 2525 Q15386 UBE3C Ubiquitin-protein ligase E3C yes yes 0 0 0 By MS/MS 2 0 1 1 32.366 26.522 2 0.024908 37185 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 135.87 44.281 152010000 152010000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22224 2525 20291 186754 148787 148787 1 HSSLITPLQAVAQR Unmodified 1519.8471 0.84707518 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 71.672 71.732 3 0.00093808 82137 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 58.098 50.358 95578000 0 0 0 5134400 2916100 10350000 4358800 0 6484500 10492000 6704500 13110000 0 8321600 27706000 22225 1986 20292 186755;186756;186757;186758;186759;186760;186761;186762;186763;186764 148788;148789;148790;148791 148791 4 HSSLITPLQAVAQRDPIIAK Unmodified 2157.227 0.22698683 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 1 By MS/MS 10 0 2 2 80.935 81.15 3;4 4.842E-05 93472 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.773 52.21 29785000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29785000 22226 1986 20293 186765;186766 148792;148793 148792 1 HSSQTSNLAHK Unmodified 1208.5898 0.58979786 412 O60563 CCNT1 Cyclin-T1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 5.0457 1.9477 3 0.00013921 2110 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 81.09 52.003 147920000 8586100 112510000 26827000 0 0 0 0 0 0 0 0 0 0 0 0 22227 412 20294 186767;186768;186769;186770;186771 148794;148795;148796;148797;148798;148799;148800;148801;148802 148799 9 HSSTPNSSEFSRK Unmodified 1462.6801 0.68006943 3380 Q8N9Q2 SREK1IP1 Protein SREK1IP1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 12.431 12.029 3 0.0011019 18064 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 59.607 48.661 106170000 60972000 0 0 4539200 5352300 0 0 6391000 0 5860400 0 11584000 0 4649000 6820300 22228 3380 20295 186772;186773;186774;186775;186776;186777;186778;186779;186780 148803;148804;148805;148806;148807;148808;148809;148810 148806 8 HSSVYPTQEELEAVQNMVSHTER Unmodified 2670.2344 0.23439299 2207 Q12906 ILF3 Interleukin enhancer-binding factor 3 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 89.791 84.378 4 4.2429E-46 106751 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.504 88.882 53239000 17840000 35399000 0 0 0 0 0 0 0 0 0 0 0 0 0 22229 2207 20296 186781;186782;186783 148811;148812;148813;148814;148815 148812 5 HSSVYPTQEELEAVQNMVSHTERALK Unmodified 2982.4505 0.45053377 2207 Q12906 ILF3 Interleukin enhancer-binding factor 3 yes yes 0 0 1 By MS/MS 3 0 1 1 93.424 90.196 4 7.3472E-05 108008 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 48.182 45.404 6349200 0 6349200 0 0 0 0 0 0 0 0 0 0 0 0 0 22230 2207 20297 186784 148816 148816 1 HSTENDSPTNVQQ Unmodified 1455.6226 0.62261413 1567 P49354 FNTA Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching 8.08 3.52 1 2 10 2 1 1 1 1 1 1 1 1 1 1 1 20.689 20.943 2 0.0010967 92444 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 91.549 83.017 45130000 15173000 0 0 0 2200800 2031500 1341900 1491300 0 2465000 3872000 4096300 2464600 2074200 7918600 22231 1567 20298 186785;186786;186787;186788;186789;186790;186791;186792;186793;186794;186795;186796;186797 148817;148818;148819;148820;148821 148818 5 HSTEVTVGPEGDMPCR Unmodified 1770.7665 0.76651795 4670 Q9NVM4 PRMT7 Protein arginine N-methyltransferase 7 yes yes 0 0 0 By MS/MS 10 0 1 1 42.399 43.142 3 0.00065839 47163 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.011 50.839 17201000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17201000 22232 4670 20299 186798 148822 148822 1 HSTIFENLANK Unmodified 1272.6463 0.64625011 763 P02787 TF Serotransferrin yes yes 0 0 0 By MS/MS 10 0 1 1 52.061 52.225 3 0.0018829 59036 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 65.278 49.905 6444400 0 0 0 0 0 0 0 6444400 0 0 0 0 0 0 0 22233 763 20300 186799 148823;148824;148825 148824 3 HSTLDFMLGAK Unmodified 1218.6067 0.60669348 1701 P52788 SMS Spermine synthase yes yes 0 0 0 By MS/MS 10 0 1 1 71.033 71.468 2 0.0014278 81487 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.098 70.358 16325000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16325000 22234 1701 20301 186800 148826 148826 1 HSTPHAAFQPNSQIGEEMSQNSFIK Unmodified 2784.2926 0.29257657 4976 Q9UKV3 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes yes 0 0 0 By MS/MS 2 0 1 1 80.087 71.957 4 2.5879E-18 94392 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.602 79.542 71671000 71671000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22235 4976 20302 186801 148827 148827 1 HSTSVSSLAER Unmodified 1172.5786 0.57856447 4345 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 21.428 21.553 2 0.032964 22204 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 47.603 39.56 18657000 0 0 0 3400400 0 7301700 0 0 0 4766900 3188200 0 0 0 0 22236 4345 20303 186802;186803;186804;186805;186806 148828;148829 148828 2 HSTTLTNR Unmodified 928.47264 0.47264284 191 O14593 RFXANK DNA-binding protein RFXANK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 5.8223 5.8829 2 0.047391 3672 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 47.849 30.082 8767800 0 0 0 0 2079300 2213400 2912900 0 0 0 0 0 0 0 1562300 22237 191 20304 186807;186808;186809;186810 148830 148830 1 HSTVFDNLPNPEDRK Unmodified 1767.854 0.85401105 85 CON__Q29443;CON__Q0IIK2 yes no 0 0 1 By MS/MS 2 0 1 1 66.812 58.517 3 0.013926 78369 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 37.048 31.993 + 28471000 28471000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22238 85 20305 186811 148831 148831 1 HSTVQHSYS Unmodified 1044.4625 0.46247208 2369 Q14126 DSG2 Desmoglein-2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 7.2442 3.8652 2 4.9947E-16 7224 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 194.9 170.26 122710000 82110000 40598000 0 0 0 0 0 0 0 0 0 0 0 0 0 22239 2369 20306 186812;186813 148832;148833;148834;148835 148834 4 HSVAQRDYEK Unmodified 1231.5945 0.59454889 3099 Q7Z4L5 TTC21B Tetratricopeptide repeat protein 21B yes yes 0 0 1 By MS/MS By matching 2 0 2 1 1 7.4922 4.6258 3 0.0067086 8007 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.577 32.104 43234000 41625000 0 1609200 0 0 0 0 0 0 0 0 0 0 0 0 22240 3099 20307 186814;186815 148836 148836 1 HSVASAQLQEK Unmodified 1196.6149 0.61494998 3342 Q8N5A5 ZGPAT Zinc finger CCCH-type with G patch domain-containing protein yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 14.346 14.56 2 0.0017099 13289 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.948 20.956 33612000 0 0 0 0 2397600 2141500 0 3144800 0 4237400 5792700 4693900 3902100 2423700 4878200 22241 3342 20308 186816;186817;186818;186819;186820;186821;186822;186823;186824 148837;148838 148837 2 HSVATAADLELK Unmodified 1253.6616 0.66156582 2828 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 50.617 46.696 2 0.0028156 58723 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 82.749 57.827 3480700 0 0 3480700 0 0 0 0 0 0 0 0 0 0 0 0 22242 2828 20309 186825 148839 148839 1 HSVDELQK Unmodified 954.47706 0.47705951 6 A0MZ66 KIAA1598 Shootin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 12.95 12.073 2 0.0056658 15172 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.28 53.432 559850000 33166000 442400000 29199000 3960200 3868200 4506200 5501100 3946900 4417500 7100400 0 0 6224900 6353600 9201200 22243 6 20310 186826;186827;186828;186829;186830;186831;186832;186833;186834;186835;186836;186837;186838;186839 148840;148841;148842;148843;148844;148845;148846;148847 148841 5 HSVDGESLSSELQQLGLPK Unmodified 2023.0222 0.02219859 4320 Q9H0A8 COMMD4 COMM domain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 88.63 85.116 3 2.1322E-65 106187 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.28 106.65 128840000 0 121700000 7138100 0 0 0 0 0 0 0 0 0 0 0 0 22244 4320 20311 186840;186841;186842;186843 148848;148849;148850;148851;148852 148848 5 HSVDSVLTALQDSSK Unmodified 1585.7948 0.79476484 2777 Q5T5X7 BEND3 BEN domain-containing protein 3 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 77.445 73.696 3 4.7299E-05 92519 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.529 69.393 29604000 0 21360000 8244000 0 0 0 0 0 0 0 0 0 0 0 0 22245 2777 20312 186844;186845 148853;148854 148853 2 HSVESMITTLDPGMAPYIK 2 Oxidation (M) 2121.0122 0.01222753 3922 Q96M27 PRRC1 Protein PRRC1 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 73.979 73.816 3 3.6904E-42 85038 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 120.29 112.51 154430000 0 0 18375000 6156900 6546600 0 7010400 13651000 8563100 17246000 15012000 13192000 13107000 9418200 26150000 22246 3922 20313 186846;186847;186848;186849;186850;186851;186852;186853;186854;186855;186856;186857;186858 148855;148856;148857;148858;148859;148860;148861;148862;148863;148864;148865;148866;148867 148860 5417;5418 13 HSVESMITTLDPGMAPYIK Oxidation (M) 2105.0173 0.017312908 3922 Q96M27 PRRC1 Protein PRRC1 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 83.362 79.745 3 1.4245E-05 99277 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.263 62.662 64636000 0 57568000 7068600 0 0 0 0 0 0 0 0 0 0 0 0 22247 3922 20313 186859;186860 148868;148869;148870 148868 5417;5418 3 HSVEVQVNVMSENILTGAK Unmodified 2054.0466 0.046639202 120 O00154 ACOT7 Cytosolic acyl coenzyme A thioester hydrolase yes yes 0 0 0 By MS/MS 3 0 1 1 83.233 79.57 3 0.0041412 80706 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 36.127 30.304 3319400 3319400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22248 120 20314 186861 148871;148872 148872 2 HSVEVTNCFSVPHNESEDEVAVDMEFAK Unmodified 3205.3968 0.39684322 141 O00303 EIF3F Eukaryotic translation initiation factor 3 subunit F yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 83.414 77.503 4 3.8637E-15 99540 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.31 66.636 27900000 27900000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22249 141 20315 186862;186863 148873;148874 148874 2 HSVGVVIGR Unmodified 922.53485 0.53484916 3690 Q92945 KHSRP Far upstream element-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.465 29.657 2 5.1871E-14 31323 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 169.97 114.53 718700000 0 0 0 27503000 20628000 27093000 29484000 24081000 27150000 40345000 45761000 142780000 46969000 52668000 234240000 22250 3690 20316 186864;186865;186866;186867;186868;186869;186870;186871;186872;186873;186874;186875 148875;148876;148877;148878;148879;148880;148881;148882;148883;148884;148885;148886;148887;148888;148889;148890;148891 148888 15 HSVLLSASR Unmodified 968.54033 0.54032847 1275 P30291 WEE1 Wee1-like protein kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 25.034 25.249 2 0.046892 26406 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 42.864 17.127 9468800 0 0 0 0 0 3200600 0 0 0 2940200 3328000 0 0 0 0 22251 1275 20317 186876;186877;186878 148892 148892 1 HSVSEMASNK Unmodified 1088.4921 0.49205765 2159 Q08499 PDE4D cAMP-specific 3',5'-cyclic phosphodiesterase 4D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 9.317 9.0248 2 1.5032E-21 6503 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 192.91 130.44 82247000 0 14601000 5436900 0 3748000 4568800 4106700 2969800 2757700 2600500 9991100 7444400 6949600 6144100 10928000 22252 2159 20318 186879;186880;186881;186882;186883;186884;186885;186886;186887;186888;186889;186890;186891 148893;148894;148895;148896;148897 148894 3 HSVVCPASSR Unmodified 1098.524 0.52402648 2394 Q14210 LY6D Lymphocyte antigen 6D yes yes 0 0 0 By MS/MS 10 0 1 1 10.516 10.379 2 0.011956 9027 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 53.327 37.829 6289400 0 0 0 6289400 0 0 0 0 0 0 0 0 0 0 0 22253 2394 20319 186892 148898 148898 1 HTAAENEFVVLK Unmodified 1356.7038 0.70376498 96 CON__Q5XKE5;Q5XKE5 KRT79 Keratin, type II cytoskeletal 79 yes no 0 0 0 By MS/MS By matching 10 0 2 1 1 56.75 56.156 3 1.4014E-05 64522 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 80.245 72.358 + 29800000 0 0 0 27358000 2441900 0 0 0 0 0 0 0 0 0 0 22254 96 20320 186893;186894 148899;148900 148900 2 HTAAENEFVVLKK Unmodified 1484.7987 0.798728 96 CON__Q5XKE5;Q5XKE5 KRT79 Keratin, type II cytoskeletal 79 yes no 0 0 1 By MS/MS 10 0 1 1 45.165 44.608 3 0.00078887 50650 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 42.469 30.411 + 30357000 0 0 0 30357000 0 0 0 0 0 0 0 0 0 0 0 22255 96 20321 186895 148901 148901 1 HTAAPTDPADGPV Unmodified 1247.5782 0.57823012 2110 Q04941 PLP2 Proteolipid protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 1 1 2 34.587 34.81 2 8.46E-17 38717 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 169.12 169.12 604590000 0 0 0 45589000 33921000 44929000 44534000 41908000 34337000 51191000 72318000 72837000 51684000 43791000 67554000 22256 2110 20322 186896;186897;186898;186899;186900;186901;186902;186903;186904;186905;186906;186907;186908 148902;148903;148904;148905;148906;148907;148908;148909;148910;148911;148912 148912 10 HTAEEYAALLTK Unmodified 1345.6878 0.68778057 4501 Q9HBL8 NMRAL1 NmrA-like family domain-containing protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 62.752 63.325 2 0.011229 71687 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.102 25.716 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22257 4501 20323 186909 148913 148913 1 HTAEIIIK Unmodified 923.54402 0.54401687 5365 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 5 1 2 2 63.899 64.062 2 0.020541 72965 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 62.714 1.9264 + 116390000 0 0 0 0 0 0 17509000 50779000 48105000 0 0 0 0 0 0 22258 5365 20324 186910;186911;186912;186913;186914 148914;148915 148914 2 HTATGDTIVSSK Unmodified 1215.6095 0.60953025 3724 Q969S9 GFM2 Ribosome-releasing factor 2, mitochondrial yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 17.21 13.671 2 1.0287E-09 18033 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.79 84.644 8554500 0 8554500 0 0 0 0 0 0 0 0 0 0 0 0 0 22259 3724 20325 186915;186916 148916;148917 148917 2 HTDAAEEVLLEK Unmodified 1353.6776 0.67760981 2900 Q6NVY1 HIBCH 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial yes yes 0 0 0 By MS/MS 3 0 1 1 54.974 50.095 2 0.0090182 61931 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 77.677 49.935 1945600 0 1945600 0 0 0 0 0 0 0 0 0 0 0 0 0 22260 2900 20326 186917 148918 148918 1 HTDDEMTGYVATR Unmodified 1494.6409 0.64090673 2611 Q16539 MAPK14 Mitogen-activated protein kinase 14 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 35.278 35.625 3 0.0042959 38161 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.787 29.727 16805000 0 0 0 0 0 1787400 0 0 0 0 0 0 0 4048700 10968000 22261 2611 20327 186918;186919;186920 148919;148920 148919 2 HTDEEFLK Unmodified 1017.4767 0.47672516 4322 Q9H0C8 ILKAP Integrin-linked kinase-associated serine/threonine phosphatase 2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 6.8 3.92 2 3 1 1 1 1 1 28.428 27.157 2 0.0096783 34558 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 132.57 73.362 63895000 0 32443000 8285500 0 0 3082400 0 0 0 0 0 10232000 0 0 9852800 22262 4322 20328 186921;186922;186923;186924;186925 148921;148922;148923 148923 3 HTDPVPDPR Unmodified 1032.4989 0.49885759 1041 P16615 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 19.29 19.557 2 0.044784 20031 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 75.738 27.234 85968000 0 0 0 8043600 0 0 0 7483600 0 18697000 14057000 21827000 15859000 0 0 22263 1041 20329 186926;186927;186928;186929;186930;186931 148924 148924 0 HTDTDVLEACSK Unmodified 1374.6085 0.60854397 3326 Q8N3U4 STAG2 Cohesin subunit SA-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 7.18 3.82 6 11 2 2 2 1 1 1 1 1 1 1 1 1 2 29.761 28.307 2;3 3.098E-14 36983 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.13 119.27 267540000 17347000 193280000 4471200 2842000 0 5403600 3485500 1899900 0 3877700 6159100 5495200 5640300 4163500 13472000 22264 3326 20330 186932;186933;186934;186935;186936;186937;186938;186939;186940;186941;186942;186943;186944;186945;186946;186947;186948 148925;148926;148927;148928;148929;148930;148931 148927 6 HTEAEIAAACETFLK Unmodified 1689.8032 0.80322103 4282 Q9C0B1 FTO Alpha-ketoglutarate-dependent dioxygenase FTO yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 1 3 2 75.952 72.157 2;3 4.1581E-38 90836 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 137.88 121.62 107540000 476120 80000000 27065000 0 0 0 0 0 0 0 0 0 0 0 0 22265 4282 20331 186949;186950;186951;186952;186953;186954 148932;148933;148934;148935;148936;148937;148938;148939 148933 8 HTEDVGVVCSDK Unmodified 1344.598 0.59797928 5205 Q9Y4K0 LOXL2 Lysyl oxidase homolog 2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 23.8 19.754 2 3.1074E-05 26136 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.63 90.595 8611600 0 8611600 0 0 0 0 0 0 0 0 0 0 0 0 0 22266 5205 20332 186955;186956 148940 148940 1 HTEMITTLK Unmodified 1072.5587 0.55868065 505 O75475 PSIP1 PC4 and SFRS1-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.2 3.92 3 2 1 1 1 1 1 39.021 36.217 2 0.0034817 37264 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107 64.402 576350000 34602000 90800000 77511000 0 0 0 0 0 0 0 0 127920000 0 0 245510000 22267 505 20333 186957;186958;186959;186960;186961 148941;148942;148943;148944;148945;148946 148943 6 HTEMITTLK Oxidation (M) 1088.5536 0.55359527 505 O75475 PSIP1 PC4 and SFRS1-interacting protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.04 2.54 2 1 21 1 2 1 1 2 2 2 2 2 1 2 2 2 2 22.809 22.581 2 0.00038294 30147 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 125.16 85.159 364420000 0 8159500 156650000 6043200 6628400 19205000 15010000 5800700 16726000 19596000 16893000 30977000 22758000 15258000 24715000 22268 505 20333 186962;186963;186964;186965;186966;186967;186968;186969;186970;186971;186972;186973;186974;186975;186976;186977;186978;186979;186980;186981;186982;186983;186984;186985 148947;148948;148949;148950;148951;148952;148953;148954;148955 148952 653 8 HTENTFSRPGGR Unmodified 1357.6487 0.64870972 2117 Q05682 CALD1 Caldesmon yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 11.719 11.942 3 0.0026988 10493 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 74.611 61.733 177140000 0 0 0 0 9005100 0 0 0 7139600 18560000 14367000 42042000 24533000 22105000 39389000 22269 2117 20334 186986;186987;186988;186989;186990;186991;186992;186993 148956;148957;148958;148959 148959 1 HTFEEAEK Unmodified 989.44543 0.44542503 1454 P42345 MTOR Serine/threonine-protein kinase mTOR yes yes 0 0 0 By MS/MS 10 0 1 1 8.1433 8.5023 2 0.020746 6612 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 62.546 47.107 2573100 0 0 0 0 0 0 0 0 0 0 2573100 0 0 0 0 22270 1454 20335 186994 148960 148960 1 HTFSPVIK Unmodified 927.5178 0.51780212 4778 Q9NZN5 ARHGEF12 Rho guanine nucleotide exchange factor 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 35.878 35.557 2 0.014742 39735 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 69.998 39.33 74498000 0 0 12888000 3956600 3127200 9847800 6507700 7875200 5078500 7170100 9568500 0 8478500 0 0 22271 4778 20336 186995;186996;186997;186998;186999;187000;187001;187002;187003;187004 148961;148962;148963;148964 148964 4 HTGCCGDNDPIDVCEIGSK Unmodified 2132.8561 0.85613759 2505 Q15181 PPA1 Inorganic pyrophosphatase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 1 4 1 58.292 52.72 2;3 4.1762E-06 65796 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 84.249 80.587 728480000 26658000 692630000 9193300 0 0 0 0 0 0 0 0 0 0 0 0 22272 2505 20337 187005;187006;187007;187008;187009;187010 148965;148966;148967;148968;148969;148970;148971;148972 148967 8 HTGGGRESGSDAWK Unmodified 1443.6491 0.64910365 1573 P49419 ALDH7A1 Alpha-aminoadipic semialdehyde dehydrogenase yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 11.359 7.9831 2;3 5.9551E-05 12390 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.38 74.266 206920000 201580000 0 5334900 0 0 0 0 0 0 0 0 0 0 0 0 22273 1573 20338 187011;187012;187013 148973;148974 148974 2 HTGMASIDSSAPETTSDSSPTLSR Oxidation (M) 2450.0867 0.086725695 34 A7E2V4 ZSWIM8 Zinc finger SWIM domain-containing protein 8 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 2 1 1 1 1 1 1 1 1 41.568 41.655 3 1.8836E-12 46298 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 70.699 67.976 79369000 0 0 0 4995000 5803000 9083800 11269000 9035500 0 9995100 0 0 13069000 7119000 8999000 22274 34 20339 187014;187015;187016;187017;187018;187019;187020;187021;187022;187023 148975;148976;148977;148978;148979;148980;148981;148982;148983 148976 31 9 HTGMASIDSSAPETTSDSSPTLSR Unmodified 2434.0918 0.091811073 34 A7E2V4 ZSWIM8 Zinc finger SWIM domain-containing protein 8 yes yes 0 0 0 By MS/MS 10 0 1 1 50.212 50.377 3 2.4703E-23 56993 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 54.235 49.966 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22275 34 20339 187024 148984 148984 1 HTGPGILSMANAGPNTNGSQFFICTAK Oxidation (M) 2806.3167 0.31668283 1931 P62937 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 4 8 3 1 1 1 1 1 1 1 2 80.168 78.386 2;3 1.7671E-162 99660 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 174.53 163 870140000 413820000 58097000 0 0 0 0 4141100 10393000 0 0 33838000 67530000 8216500 21235000 252870000 22276 1931 20340 187025;187026;187027;187028;187029;187030;187031;187032;187033;187034;187035;187036 148985;148986;148987;148988;148989;148990;148991;148992;148993;148994;148995 148989 3109 10 HTGPGILSMANAGPNTNGSQFFICTAK Unmodified 2790.3218 0.3217682 1931 P62937 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 3.8 3.12 3 1 1 3 1 1 88.215 83.305 3 1.3304E-246 106362 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 176.9 169.95 249510000 225000000 0 0 0 0 0 0 0 0 0 0 0 0 0 24505000 22277 1931 20340 187037;187038;187039;187040;187041 148996;148997;148998;148999;149000 148999 5 HTGPITCLQFNPK Unmodified 1511.7555 0.75548298 2984 Q6UXN9 WDR82 WD repeat-containing protein 82 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.3 2.25 2 21 1 1 1 2 1 2 2 2 1 2 2 2 2 2 61.099 60.616 2;3 2.2837E-05 67911 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.301 78.947 285560000 40183000 25632000 0 5665700 9309600 10399000 11437000 15251000 16044000 8829200 21875000 28918000 17634000 27979000 46404000 22278 2984 20341 187042;187043;187044;187045;187046;187047;187048;187049;187050;187051;187052;187053;187054;187055;187056;187057;187058;187059;187060;187061;187062;187063;187064 149001;149002;149003;149004;149005;149006;149007;149008;149009;149010;149011;149012;149013;149014 149004 13 HTGPNSPDTANDGFVR Unmodified 1683.7601 0.76011066 1309;1773 P55795;P31943 HNRNPH2;HNRNPH1 Heterogeneous nuclear ribonucleoprotein H2;Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 30 3 3 2 2 3 3 2 2 2 3 3 2 32.634 32.78 2;3 3.5857E-60 35837 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 176.4 165.75 3608800000 0 0 0 169770000 153080000 269380000 251620000 219880000 146440000 364110000 357870000 411740000 333850000 315420000 615630000 22279 1773;1309 20342 187065;187066;187067;187068;187069;187070;187071;187072;187073;187074;187075;187076;187077;187078;187079;187080;187081;187082;187083;187084;187085;187086;187087;187088;187089;187090;187091;187092;187093;187094 149015;149016;149017;149018;149019;149020;149021;149022;149023;149024;149025;149026;149027;149028;149029;149030;149031;149032;149033;149034;149035;149036;149037;149038;149039;149040;149041;149042 149026 28 HTGYVGLK Unmodified 873.47085 0.47085192 3702 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS 6.8 3.92 2 3 1 1 1 1 1 21.146 19.887 2 0.0043522 18742 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 111.01 68.007 1192000000 702520000 0 343260000 0 0 0 0 0 0 0 51124000 43933000 0 0 51179000 22280 3702 20343 187095;187096;187097;187098;187099 149043;149044;149045;149046 149043 4 HTHIDKPDCSGPPMDISNK Oxidation (M) 2163.9677 0.96773695 4062 Q99805 TM9SF2 Transmembrane 9 superfamily member 2 yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 32.286 27.572 4 0.0004935 39027 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.453 45.649 23761000 20940000 0 2821100 0 0 0 0 0 0 0 0 0 0 0 0 22281 4062 20344 187100;187101 149047 149047 5558 1 HTHIDKPDCSGPPMDISNK Unmodified 2147.9728 0.97282233 4062 Q99805 TM9SF2 Transmembrane 9 superfamily member 2 yes yes 0 0 1 By MS/MS 2 0 1 1 45.604 38.612 4 0.0033103 52986 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.64 33.817 17142000 17142000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22282 4062 20344 187102 149048;149049 149048 2 HTIEMIEK Unmodified 999.50592 0.5059168 3631 Q92576 PHF3 PHD finger protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 28.469 28.913 2 0.0062437 30814 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 102.51 67.158 57372000 0 0 0 0 0 0 0 0 0 6719300 10594000 8444500 9124700 10763000 11726000 22283 3631 20345 187103;187104;187105;187106;187107;187108;187109;187110 149050;149051;149052;149053;149054;149055 149054 6 HTIPEEETHR Unmodified 1247.5895 0.58946351 3026 Q70J99 UNC13D Protein unc-13 homolog D yes yes 0 0 0 By MS/MS 10 0 1 1 8.5707 8.9297 3 0.0074441 7068 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 51.436 44.833 3544900 0 0 0 0 0 0 0 0 0 0 3544900 0 0 0 0 22284 3026 20346 187111 149056 149056 1 HTLADNFNPVSEER Unmodified 1627.759 0.75904803 1108 P20645 M6PR Cation-dependent mannose-6-phosphate receptor yes yes 0 0 0 By MS/MS 10 0 1 1 56.549 56.772 3 0.019039 64748 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 21.272 11.352 4912400 0 0 0 0 0 0 0 0 0 0 0 0 4912400 0 0 22285 1108 20347 187112 149057 149057 1 HTLDELNPQK Unmodified 1193.6041 0.60405094 2238 Q13131 PRKAA1 5'-AMP-activated protein kinase catalytic subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.373 31.559 2 0.0023379 34361 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 84.615 63.744 88596000 0 0 0 4587700 5116700 7219400 7354200 5374300 4742000 7825100 8321800 10340000 9494700 8518400 9701900 22286 2238 20348 187113;187114;187115;187116;187117;187118;187119;187120;187121;187122;187123;187124 149058;149059;149060;149061;149062;149063;149064;149065;149066;149067;149068;149069 149064 12 HTLGDSDNES Unmodified 1073.4261 0.42614615 766 P02794 FTH1 Ferritin heavy chain;Ferritin heavy chain, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 8.2635 4.8204 2 0.010024 7277 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.86 97.907 277790000 15263000 262520000 0 0 0 0 0 0 0 0 0 0 0 0 0 22287 766 20349 187125;187126 149070 149070 0 HTLGEVWVQK Unmodified 1195.635 0.63495714 3790 Q96D46 NMD3 60S ribosomal export protein NMD3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 2 6 1 1 1 1 1 2 1 51.01 49.795 2;3 8.5668E-06 70072 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 153.08 120.73 108550000 49915000 0 6457200 0 0 13021000 0 0 0 0 5863300 10953000 0 12089000 10250000 22288 3790 20350 187127;187128;187129;187130;187131;187132;187133;187134 149071;149072;149073;149074;149075 149072 5 HTLNPEETSSVVRK Unmodified 1595.8267 0.82673367 2756 Q5SRE5 NUP188 Nucleoporin NUP188 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.183 29.375 3 2.0928E-14 30993 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 115.06 101.03 181350000 0 0 0 7458800 6434300 12627000 10319000 16873000 8739800 16322000 8762700 20770000 18124000 17254000 37666000 22289 2756 20351 187135;187136;187137;187138;187139;187140;187141;187142;187143;187144;187145;187146 149076;149077;149078;149079;149080;149081;149082;149083;149084;149085;149086;149087;149088;149089;149090 149088 15 HTLNQIDSVK Unmodified 1153.6091 0.60913632 71 CON__P12763 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 28.437 27.344 2 9.5657E-22 35065 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 197.06 137.82 + 358020000 22326000 140250000 100020000 4429100 5111100 7094700 7796300 0 5998400 5916900 9830000 16694000 6382900 8275400 17895000 22290 71 20352 187147;187148;187149;187150;187151;187152;187153;187154;187155;187156;187157;187158;187159;187160;187161;187162 149091;149092;149093;149094;149095;149096;149097;149098;149099;149100;149101;149102;149103;149104;149105;149106 149102 15 HTLQQHQETPK Unmodified 1345.6739 0.67386184 3091 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.65 3.65 5 12 2 1 2 1 1 1 1 1 1 1 1 1 1 1 1 6.71 5.9297 2;3 7.1663E-37 4260 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 179.35 154.5 381330000 180450000 12038000 36363000 7955700 10121000 7477800 14793000 8045000 11020000 11388000 21495000 14882000 15586000 15926000 13790000 22291 3091 20353 187163;187164;187165;187166;187167;187168;187169;187170;187171;187172;187173;187174;187175;187176;187177;187178;187179 149107;149108;149109;149110;149111;149112;149113;149114;149115;149116;149117;149118;149119;149120;149121 149109 14 HTLSDMEYR Oxidation (M) 1166.5026 0.50262234 3566 Q8WVV4 POF1B Protein POF1B yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 11 3 1 1 3 1 1 1 17.223 17.308 2;3 0.0055125 17760 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 69.825 55.667 44148000 0 0 0 20571000 1050900 0 1260700 9514200 0 0 1790900 0 5577600 4382700 0 22292 3566 20354 187180;187181;187182;187183;187184;187185;187186;187187;187188;187189;187190 149122;149123;149124 149123 5053 2 HTLSDMEYR Unmodified 1150.5077 0.50770771 3566 Q8WVV4 POF1B Protein POF1B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 31.866 31.774 2 3.143E-08 35167 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 201.39 87.682 61603000 0 0 0 40160000 4286300 0 2331100 13086000 1739800 0 0 0 0 0 0 22293 3566 20354 187191;187192;187193;187194;187195 149125 149125 0 HTLSYVDVGTGK Unmodified 1275.6459 0.64591575 1293 P31040 SDHA Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 2 2 2 47.476 41.818 2;3 2.6925E-169 58102 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 257.4 148.6 143130000 67207000 4611700 71313000 0 0 0 0 0 0 0 0 0 0 0 0 22294 1293 20355 187196;187197;187198;187199;187200;187201 149126;149127;149128;149129;149130;149131;149132 149129 6 HTLTQIK Unmodified 839.4865 0.48650199 1410 P40227 CCT6A T-complex protein 1 subunit zeta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.16 3.73 5 2 12 3 2 2 1 1 1 1 1 1 1 1 1 1 1 1 16.15 14.889 2 0.011524 22294 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 143.11 42.919 8796100000 2947700000 2856100000 1826600000 52367000 48944000 103770000 68055000 79737000 46823000 109550000 139670000 103660000 91187000 106780000 215100000 22295 1410 20356 187202;187203;187204;187205;187206;187207;187208;187209;187210;187211;187212;187213;187214;187215;187216;187217;187218;187219;187220 149133;149134;149135;149136;149137;149138;149139;149140;149141;149142;149143;149144;149145;149146;149147;149148;149149;149150;149151;149152;149153;149154 149143 22 HTMMFSATFPK 2 Oxidation (M) 1328.5893 0.58932885 170 O00571;O15523 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 46.568 46.906 2 0.0011634 52116 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 63.534 50.497 65345000 0 0 0 0 0 9444500 0 5690500 6320600 11255000 0 9670200 14158000 0 8805800 22296 170 20357 187221;187222;187223;187224;187225;187226;187227 149155;149156 149156 237;238 1 HTNFVEFR Unmodified 1048.509 0.50902834 1725 P53680 AP2S1 AP-2 complex subunit sigma yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.7 42.875 2 0.00014213 47597 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 155 133.23 245560000 0 0 0 10619000 6042100 25960000 8813700 18954000 14934000 20231000 22388000 26025000 23009000 18342000 50245000 22297 1725 20358 187228;187229;187230;187231;187232;187233;187234;187235;187236;187237;187238;187239 149157;149158;149159;149160;149161;149162;149163;149164;149165;149166 149157 9 HTNYTMEHIR Unmodified 1300.5983 0.59825406 356;971;1359 O43707;P12814;P35609 ACTN4;ACTN1;ACTN2 Alpha-actinin-4;Alpha-actinin-1;Alpha-actinin-2 no no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 1 1 1 2 1 1 2 22.355 22.623 2;3 0.0023475 22996 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 62.408 52.72 365690000 0 0 0 8203000 3556500 14226000 6882800 10150000 6144300 14704000 42877000 72920000 18017000 41139000 126870000 22298 356;971;1359 20359 187240;187241;187242;187243;187244;187245;187246;187247;187248;187249;187250;187251;187252;187253 149167;149168;149169;149170;149171;149172;149173;149174;149175;149176;149177 149172 8 HTNYTMEHIR Oxidation (M) 1316.5932 0.59316868 356;971;1359 O43707;P12814;P35609 ACTN4;ACTN1;ACTN2 Alpha-actinin-4;Alpha-actinin-1;Alpha-actinin-2 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 13.01 13.16 3 0.0011054 11921 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 74.841 64.653 200520000 0 0 0 9338200 5312900 12302000 8634600 0 4818000 18373000 22276000 44006000 0 20447000 55013000 22299 356;971;1359 20359 187254;187255;187256;187257;187258;187259;187260;187261;187262;187263 149178;149179;149180 149180 448 1 HTPADVQLIGTDSQGNK Unmodified 1779.8751 0.87514042 1462 P42684 ABL2 Abelson tyrosine-protein kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 46.213 45.992 3 6.9318E-08 51598 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 89.866 74.23 239960000 0 4452300 0 18363000 15662000 15469000 15584000 19517000 11348000 19225000 23823000 23987000 30924000 16033000 25574000 22300 1462 20360 187264;187265;187266;187267;187268;187269;187270;187271;187272;187273;187274;187275;187276 149181;149182;149183;149184;149185;149186;149187;149188;149189;149190;149191;149192;149193;149194;149195;149196 149189 12 HTPDVVLDTLEPLK Unmodified 1575.8508 0.85082315 451 O75044 SRGAP2 SLIT-ROBO Rho GTPase-activating protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 82.589 80.127 3 0.00024773 97087 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 58.32 46.88 4585000 0 0 4585000 0 0 0 0 0 0 0 0 0 0 0 0 22301 451 20361 187277 149197 149197 1 HTPELPLAPRPLK Unmodified 1467.8562 0.8561833 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 60.151 60.329 3 1.7898E-05 67585 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.605 71.328 164930000 0 0 0 0 2605700 12244000 8827500 13725000 17162000 14682000 11889000 28974000 19536000 0 35289000 22302 5262 20362 187278;187279;187280;187281;187282;187283;187284;187285;187286;187287 149198;149199;149200;149201;149202;149203;149204;149205;149206;149207;149208 149202 10 HTPGDQDCDELGRETGTR Unmodified 2042.8712 0.87119403 902 P0CG13 CHTF8 Chromosome transmission fidelity protein 8 homolog yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 24.762 25.043 3 0.014468 25960 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 29.274 25.177 45079000 0 0 0 0 2818600 2928300 0 0 0 3575100 6698200 9527900 0 3475700 16055000 22303 902 20363 187288;187289;187290;187291;187292;187293;187294 149209;149210;149211 149211 2 HTPLPQQR Unmodified 975.52501 0.52501276 5209 Q9Y4R8 TELO2 Telomere length regulation protein TEL2 homolog yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 12.251 12.449 2 0.015124 11700 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 69.383 50.578 45025000 0 0 0 3876900 0 7123300 0 0 0 8195700 7060200 9603500 0 0 9165700 22304 5209 20364 187295;187296;187297;187298;187299;187300 149212 149212 1 HTPYGNQTDYR Unmodified 1350.5953 0.59527717 3142 Q86U70 LDB1 LIM domain-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 16.802 17.199 2 0.027275 16071 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.022 24.355 8129400 0 0 0 0 0 0 0 0 0 1030400 842740 2103900 1229000 0 2923400 22305 3142 20365 187301;187302;187303;187304;187305 149213;149214 149213 2 HTQENCETWGVNGETGTLVDMK Oxidation (M) 2521.085 0.084951556 1570 P49368 CCT3 T-complex protein 1 subunit gamma yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.8 4 1 8 1 3 1 1 1 1 1 1 1 1 1 62.477 60.324 2;3 1.3535E-32 77455 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.56 113.78 337750000 20209000 215490000 19036000 4477900 0 11760000 7248700 7627500 7824800 11755000 0 20085000 12240000 0 0 22306 1570 20366 187306;187307;187308;187309;187310;187311;187312;187313;187314;187315;187316;187317;187318 149215;149216;149217;149218;149219;149220;149221;149222;149223;149224;149225;149226;149227;149228;149229;149230 149221 2511 16 HTQENCETWGVNGETGTLVDMK Unmodified 2505.09 0.090036934 1570 P49368 CCT3 T-complex protein 1 subunit gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.83 3.67 3 1 2 1 2 1 1 1 74.324 71.226 3 7.6805E-41 87296 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 126.02 120.03 326380000 24034000 254110000 24387000 0 0 0 0 0 0 0 0 6626700 0 0 17222000 22307 1570 20366 187319;187320;187321;187322;187323;187324 149231;149232;149233;149234;149235;149236;149237;149238 149237 8 HTQTSSGGQAASSHEQAR Unmodified 1838.8256 0.82556447 78 CON__P20930;P20930 FLG Filaggrin yes no 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 5.5391 5.6451 3 0.001552 3505 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 46.925 41.496 + 91610000 0 0 0 12687000 8016100 8302200 5793400 10136000 4983600 11916000 9966200 9717300 5073000 0 5019000 22308 78 20367 187325;187326;187327;187328;187329;187330;187331;187332;187333;187334;187335 149239 149239 1 HTSAEEEEPPPVK Unmodified 1448.6783 0.6783381 4259 Q9BZ95 WHSC1L1 Histone-lysine N-methyltransferase NSD3 yes yes 0 0 0 By matching By matching By MS/MS By matching By matching 10 0 5 1 1 1 1 1 20.089 20.251 3 0.022846 20808 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 22.493 15.912 11897000 0 0 0 0 1101800 0 2278800 0 0 2644800 0 0 0 2436800 3434400 22309 4259 20368 187336;187337;187338;187339;187340 149240 149240 1 HTSFSSDVK Unmodified 1006.472 0.47197413 4258 Q9BZ29 DOCK9 Dedicator of cytokinesis protein 9 yes yes 0 0 0 By matching By MS/MS By MS/MS 2 0 3 1 1 1 17.16 13.78 2 0.0090639 18470 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.37 52.184 52369000 13373000 17286000 21710000 0 0 0 0 0 0 0 0 0 0 0 0 22310 4258 20369 187341;187342;187343 149241;149242 149241 1 HTSTLAAMK Oxidation (M) 974.48552 0.48551571 3326;3563;4935 Q8N3U4;Q8WVM7;Q9UJ98 STAG2;STAG1;STAG3 Cohesin subunit SA-2;Cohesin subunit SA-1;Cohesin subunit SA-3 no no 0 1 0 By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.3547 6.4794 2 0.0029311 4505 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 86.794 52.997 36612000 0 0 0 1838000 1720500 3185900 2538600 1550200 1043100 4335300 3595900 4646900 3183200 4077400 4896500 22311 3326;3563;4935 20370 187344;187345;187346;187347;187348;187349;187350;187351;187352;187353;187354;187355 149243;149244;149245;149246;149247;149248 149247 4918 4 HTSTLAAMK Unmodified 958.4906 0.49060109 3326;3563;4935 Q8N3U4;Q8WVM7;Q9UJ98 STAG2;STAG1;STAG3 Cohesin subunit SA-2;Cohesin subunit SA-1;Cohesin subunit SA-3 no no 0 0 0 By MS/MS 10 0 1 1 15.076 15.548 2 0.026355 14397 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.248 42.019 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22312 3326;3563;4935 20370 187356 149249 149249 1 HTSVVSSGPSVLR Unmodified 1324.7099 0.709913 488 O75376 NCOR1 Nuclear receptor corepressor 1 yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 2 1 1 2 1 1 1 2 1 1 2 38.862 39.07 2;3 0.016857 41977 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.293 11.551 115100000 0 0 0 4597200 6059300 6587400 6292100 7459000 7391600 8296800 8401700 16746000 8262900 10300000 24703000 22313 488 20371 187357;187358;187359;187360;187361;187362;187363;187364;187365;187366;187367;187368;187369;187370;187371;187372 149250;149251 149251 1 HTTDLDASK Unmodified 986.46689 0.46688876 969 P12532;P17540 CKMT1A;CKMT2 Creatine kinase U-type, mitochondrial;Creatine kinase S-type, mitochondrial yes no 0 0 0 By MS/MS 10 0 1 1 6.5042 6.3766 2 0.0095702 4352 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 66.351 35.062 1391900 0 0 0 1391900 0 0 0 0 0 0 0 0 0 0 0 22314 969 20372 187373 149252 149252 1 HTTDPDIDK Unmodified 1040.4775 0.47745344 4115 Q9BRS2 RIOK1 Serine/threonine-protein kinase RIO1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 11.184 7.8586 2 0.033862 11121 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.42 30.624 4812100 0 4812100 0 0 0 0 0 0 0 0 0 0 0 0 0 22315 4115 20373 187374;187375 149253;149254 149253 2 HTTDPDIDKK Unmodified 1168.5724 0.57241646 4115 Q9BRS2 RIOK1 Serine/threonine-protein kinase RIO1 yes yes 0 0 1 By MS/MS 3 0 1 1 8.2324 4.874 3 0.016935 6612 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 41.54 21.899 9210100 0 9210100 0 0 0 0 0 0 0 0 0 0 0 0 0 22316 4115 20374 187376 149255 149255 1 HTTEAAAGALQNITAGDRR Unmodified 1951.9824 0.98239946 5182 Q9Y446 PKP3 Plakophilin-3 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 2 1 47.805 48.031 3;4 8.4338E-05 53424 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 53.779 43.498 117140000 0 0 0 3647800 0 5460400 5742200 9154600 4259500 11631000 9434400 15929000 10756000 25411000 15718000 22317 5182 20375 187377;187378;187379;187380;187381;187382;187383;187384;187385;187386;187387;187388 149256;149257;149258;149259 149259 4 HTTFEQPVFSVSK Unmodified 1505.7514 0.75144346 1331 P33981 TTK Dual specificity protein kinase TTK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 3 24 1 2 2 2 2 2 2 2 2 2 2 2 2 2 60.94 60.448 2;3 2.2822E-32 69119 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 164.48 145.81 590690000 85646000 0 18214000 24636000 23984000 34149000 36267000 35385000 30568000 44590000 51348000 57125000 51186000 41236000 56354000 22318 1331 20376 187389;187390;187391;187392;187393;187394;187395;187396;187397;187398;187399;187400;187401;187402;187403;187404;187405;187406;187407;187408;187409;187410;187411;187412;187413;187414;187415 149260;149261;149262;149263;149264;149265;149266;149267;149268;149269;149270;149271;149272;149273;149274;149275;149276;149277;149278;149279;149280;149281;149282;149283;149284 149280 15 HTTSIFDDFAHYEK Unmodified 1709.7686 0.76855009 3120;4251 Q7Z739;Q9BYJ9 YTHDF3;YTHDF1 YTH domain-containing family protein 3;YTH domain-containing family protein 1 no no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS 7.91 3.42 2 1 8 2 1 1 1 1 1 1 1 1 1 75.965 75.037 3 2.4063E-12 85555 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 92.939 85.9 119160000 20384000 8871800 0 0 0 4609200 0 0 5320900 2193100 2450700 5278400 2921000 4745500 62389000 22319 3120;4251 20377 187416;187417;187418;187419;187420;187421;187422;187423;187424;187425;187426 149285;149286;149287;149288;149289 149285 5 HTTSIFDDFSHYEK Unmodified 1725.7635 0.76346471 5227 Q9Y5A9 YTHDF2 YTH domain-containing family protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 6.25 3.77 1 1 2 1 1 1 1 75.306 72.547 3 0.00029558 82050 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.09 47.927 56937000 17192000 7723600 0 0 0 0 0 0 0 0 0 0 0 2946400 29074000 22320 5227 20378 187427;187428;187429;187430 149290;149291;149292;149293 149290 4 HTVDDGLDIR Unmodified 1139.5571 0.55710075 3170 Q86VP6 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 37.608 37.848 2 0.0062946 41788 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 75.378 48.248 46612000 0 0 0 0 0 9075300 6501500 3032400 0 8237500 0 0 0 7247900 12517000 22321 3170 20379 187431;187432;187433;187434;187435;187436;187437;187438 149294;149295;149296;149297;149298;149299;149300;149301;149302 149295 9 HTVDDGLDIRK Unmodified 1267.6521 0.65206377 3170 Q86VP6 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.9 3.81 6 2 12 3 3 2 1 1 1 1 1 1 1 1 1 1 1 1 30.418 28.627 2;3 1.0811E-15 28990 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 159.09 101.74 1653700000 287560000 230040000 387010000 32420000 21527000 115310000 36820000 35046000 29664000 77654000 90252000 48100000 61018000 55706000 145600000 22322 3170 20380 187439;187440;187441;187442;187443;187444;187445;187446;187447;187448;187449;187450;187451;187452;187453;187454;187455;187456;187457;187458 149303;149304;149305;149306;149307;149308;149309;149310;149311;149312;149313;149314;149315;149316;149317;149318;149319;149320;149321;149322;149323;149324;149325;149326;149327 149311 24 HTVYEDQLAK Unmodified 1202.5932 0.5931519 4650 Q9NUP7 TRMT13 tRNA:m(4)X modification enzyme TRM13 homolog yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 31.38 27.515 2 0.0025714 36242 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.26 33.657 31552000 0 27441000 4110900 0 0 0 0 0 0 0 0 0 0 0 0 22323 4650 20381 187459;187460 149328;149329 149328 2 HTYLQTNGK Unmodified 1060.5302 0.53015772 4301 Q9GZR1 SENP6 Sentrin-specific protease 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 15.626 12.329 2 0.020716 15317 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 74.92 40.667 68457000 48436000 14648000 5373800 0 0 0 0 0 0 0 0 0 0 0 0 22324 4301 20382 187461;187462;187463 149330 149330 1 HVAAGTQQPYTDGVR Unmodified 1598.7801 0.78011783 1010 P14923 JUP Junction plakoglobin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 38 4 3 3 3 4 3 3 3 3 4 2 3 26.582 26.764 2;3 4.9585E-28 29467 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 138.02 95.99 891090000 0 0 0 174270000 55426000 76232000 44439000 184560000 35120000 54841000 62912000 80118000 73309000 25390000 24478000 22325 1010 20383 187464;187465;187466;187467;187468;187469;187470;187471;187472;187473;187474;187475;187476;187477;187478;187479;187480;187481;187482;187483;187484;187485;187486;187487;187488;187489;187490;187491;187492;187493;187494;187495;187496;187497;187498;187499;187500;187501 149331;149332;149333;149334;149335;149336;149337;149338;149339;149340;149341;149342;149343;149344;149345;149346;149347;149348;149349;149350;149351;149352;149353;149354;149355;149356;149357;149358;149359;149360;149361;149362;149363;149364;149365 149333 33 HVAEDLGK Unmodified 867.44503 0.4450311 1426 P40939 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 0 0 0 By MS/MS 3 0 1 1 12.812 9.39 2 0.041598 11931 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 69.998 32.353 5483100 0 5483100 0 0 0 0 0 0 0 0 0 0 0 0 0 22326 1426 20384 187502 149366 149366 1 HVAEVLEYTK Unmodified 1187.6186 0.61863837 804 P05198 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 42.391 42.436 2 0.0019878 47499 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 99.815 83.039 25784000 0 0 0 0 3021800 6072200 4951000 0 0 0 0 0 7102500 4636000 0 22327 804 20385 187503;187504;187505;187506;187507;187508;187509 149367;149368;149369;149370;149371;149372 149369 5 HVALSVGGR Unmodified 894.50355 0.50354903 3561 Q8WVJ2 NUDCD2 NudC domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 24.868 24.807 2 0.019227 26399 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 54.157 22.044 13922000 0 0 0 4293000 0 6209100 3419700 0 0 0 0 0 0 0 0 22328 3561 20386 187510;187511;187512 149373;149374;149375 149375 3 HVATEYQENK Unmodified 1217.5677 0.56766543 632 O95239 KIF4A Chromosome-associated kinesin KIF4A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.9 3.81 3 1 6 1 2 1 1 1 1 1 1 1 11.205 9.9162 2;3 0.0011816 5911 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 109.02 90.796 173120000 4392500 115860000 21611000 2513700 0 2179000 0 2625600 0 0 11332000 6619800 0 0 5989000 22329 632 20387 187513;187514;187515;187516;187517;187518;187519;187520;187521;187522 149376;149377;149378;149379;149380;149381;149382;149383 149379 6 HVAVTNMNEHSSR Oxidation (M) 1496.679 0.67902357 1328 P33176;O60282;Q12840 KIF5B;KIF5C;KIF5A Kinesin-1 heavy chain;Kinesin heavy chain isoform 5C;Kinesin heavy chain isoform 5A yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.1376 6.2582 3 1.4929E-20 4339 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 156.36 152.64 366770000 0 0 0 23871000 24515000 32796000 29374000 20630000 22750000 28057000 44088000 42128000 36869000 23275000 38415000 22330 1328 20388 187523;187524;187525;187526;187527;187528;187529;187530;187531;187532;187533;187534 149384;149385;149386;149387;149388;149389;149390;149391;149392;149393;149394;149395 149392 1977 12 HVAVTNMNEHSSR Unmodified 1480.6841 0.68410895 1328 P33176;O60282;Q12840 KIF5B;KIF5C;KIF5A Kinesin-1 heavy chain;Kinesin heavy chain isoform 5C;Kinesin heavy chain isoform 5A yes no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.422 12.571 3 0.00038261 11723 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 76.357 71.078 240160000 0 0 0 10854000 15134000 26448000 13183000 14555000 9941800 31038000 18259000 30743000 19526000 13328000 37150000 22331 1328 20388 187535;187536;187537;187538;187539;187540;187541;187542;187543;187544;187545;187546 149396;149397;149398;149399;149400;149401;149402;149403;149404;149405;149406;149407 149403 11 HVAYIIR Unmodified 870.50757 0.50757178 1292 Q5VSP4;P31025 LCN1P1;LCN1 Putative lipocalin 1-like protein 1;Lipocalin-1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 33.509 33.697 2 0.026956 36485 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 77.944 59.318 52430000 0 0 0 0 5681300 3313600 4360300 4570100 3718800 5639100 10280000 0 5789100 2973700 6104200 22332 1292 20389 187547;187548;187549;187550;187551;187552;187553;187554;187555;187556 149408 149408 1 HVCVDMPAISGSLK Oxidation (M) 1528.7378 0.737784 5403 yes yes 0 1 0 By MS/MS 2.5 0.5 2 2 4 51.607 46.273 2 0.0022469 57476 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 66.435 18.611 + 41440000 0 41440000 0 0 0 0 0 0 0 0 0 0 0 0 0 22333 5403 20390 187557;187558;187559;187560 149409;149410 149410 6773 2 HVDSEGEIK Unmodified 1012.4825 0.48253882 1635 P50747 HLCS Biotin--protein ligase;Biotin--[methylmalonyl-CoA-carboxytransferase] ligase;Biotin--[propionyl-CoA-carboxylase [ATP-hydrolyzing]] ligase;Biotin--[methylcrotonoyl-CoA-carboxylase] ligase;Biotin--[acetyl-CoA-carboxylase] ligase yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 10.174 6.8552 2 0.0086463 9625 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.542 50.736 41398000 0 41398000 0 0 0 0 0 0 0 0 0 0 0 0 0 22334 1635 20391 187561;187562;187563 149411;149412;149413 149411 3 HVDSIINK Unmodified 924.50288 0.50288033 2667 Q3KQU3 MAP7D1 MAP7 domain-containing protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 20.568 19.798 2 0.011827 18688 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.035 38.389 66679000 11660000 10870000 12018000 2756700 1928900 2793700 2254100 0 2669000 0 4696400 4618900 2891700 3258500 4262800 22335 2667 20392 187564;187565;187566;187567;187568;187569;187570;187571;187572;187573;187574;187575;187576 149414;149415;149416;149417;149418;149419;149420 149415 7 HVDSLSQR Unmodified 940.47264 0.47264284 4898 Q9UHD8 SEPT9 Septin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 7.5644 7.6672 2 0.016804 5694 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.682 51.461 48221000 0 0 0 2614400 2505400 2993300 6196000 3738100 3066000 3252700 0 17049000 0 2306800 4498800 22336 4898 20393 187577;187578;187579;187580;187581;187582;187583;187584;187585;187586 149421 149421 1 HVEASGGSGPGDSGPSDPR Unmodified 1764.7663 0.76631825 5059 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 14.725 14.895 3 7.393E-24 14622 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 98.573 93.864 170170000 0 0 0 11443000 6401700 11927000 10979000 0 8787900 18210000 17338000 15524000 17563000 17819000 34181000 22337 5059 20394 187587;187588;187589;187590;187591;187592;187593;187594;187595;187596;187597 149422;149423;149424;149425;149426;149427;149428;149429;149430;149431 149428 10 HVEAVAYYK Unmodified 1078.5447 0.54474515 364 O43765 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.56 3.86 3 1 5 2 1 1 1 1 1 1 1 32.405 29.554 2 1.6317E-06 41793 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 164.53 128.91 692350000 271100000 26562000 360000000 0 0 0 6555400 0 0 0 0 0 12459000 15671000 0 22338 364 20395 187598;187599;187600;187601;187602;187603;187604;187605;187606 149432;149433;149434;149435;149436;149437;149438;149439;149440;149441;149442;149443;149444;149445;149446;149447 149436 16 HVEDLLTK Unmodified 953.5182 0.51819605 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.53 3.66 1 3 2 13 3 2 1 1 1 1 1 2 1 1 1 1 1 1 1 39.467 38.539 2 6.5911E-12 43910 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 194.44 120.03 1029600000 63426000 183360000 284050000 28514000 23304000 28750000 31772000 26209000 25655000 46831000 82070000 56557000 39954000 36615000 72497000 22339 965 20396 187607;187608;187609;187610;187611;187612;187613;187614;187615;187616;187617;187618;187619;187620;187621;187622;187623;187624;187625 149448;149449;149450;149451;149452;149453;149454;149455;149456;149457;149458;149459;149460;149461;149462;149463;149464;149465;149466;149467;149468;149469 149462 20 HVEEFSPR Unmodified 999.47739 0.47739386 2415 Q14566 MCM6 DNA replication licensing factor MCM6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 21.815 20.72 2 0.0044044 21197 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 110.81 97.541 722140000 31537000 60143000 153260000 18395000 13164000 28320000 14428000 24306000 14535000 27372000 60311000 68982000 44730000 40707000 121950000 22340 2415 20397 187626;187627;187628;187629;187630;187631;187632;187633;187634;187635;187636;187637;187638;187639;187640;187641;187642 149470;149471;149472;149473;149474;149475;149476;149477;149478;149479;149480;149481;149482;149483;149484;149485;149486;149487;149488 149482 19 HVEEFSPRAVYTSGK Unmodified 1705.8424 0.84238373 2415 Q14566 MCM6 DNA replication licensing factor MCM6 yes yes 0 0 1 By MS/MS By MS/MS 2.25 0.433 3 1 3 1 52.05 45.686 2;3 1.8558E-05 62964 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 112.13 104.56 375850000 368030000 0 7819400 0 0 0 0 0 0 0 0 0 0 0 0 22341 2415 20398 187643;187644;187645;187646 149489;149490;149491;149492;149493 149493 5 HVEPGNAAIR Unmodified 1062.557 0.55704117 2635 Q16775 HAGH Hydroxyacylglutathione hydrolase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 2 1 1 1 1 1 1 1 1 17.157 17.254 2 0.0061526 17555 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 66.073 50.634 144510000 0 0 0 10465000 13003000 13588000 9537400 10805000 9538200 10816000 23692000 43068000 0 0 0 22342 2635 20399 187647;187648;187649;187650;187651;187652;187653;187654;187655;187656 149494;149495;149496;149497;149498;149499;149500;149501 149501 1 HVEPGNAAIREK Unmodified 1319.6946 0.69459728 2635 Q16775 HAGH Hydroxyacylglutathione hydrolase, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 14.243 14.4 3 1.4487E-06 13496 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 113.77 100.33 108610000 0 0 0 5792800 7413300 5793400 10394000 9447300 9448900 11378000 14923000 23011000 0 1803200 9203500 22343 2635 20400 187657;187658;187659;187660;187661;187662;187663;187664;187665;187666;187667 149502;149503;149504;149505;149506;149507;149508;149509;149510;149511;149512 149510 11 HVEYEVSSQRFK Unmodified 1507.7419 0.7419414 5253 Q9Y5X2 SNX8 Sorting nexin-8 yes yes 0 0 1 By MS/MS 2 0 1 1 41.224 34.543 3 0.0019763 47895 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.848 65.873 25438000 25438000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22344 5253 20401 187668 149513 149513 0 HVFAIFNTEQR Unmodified 1360.6888 0.68878362 1630 P50570 DNM2 Dynamin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 2 1 1 2 1 1 1 2 66.652 66.843 2;3 0.00045845 75355 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.615 72.901 76933000 0 0 0 0 0 14304000 2946800 3153700 9975900 3833500 0 0 4788700 4656200 33274000 22345 1630 20402 187669;187670;187671;187672;187673;187674;187675;187676;187677;187678;187679 149514;149515;149516 149514 2 HVFEDPQRR Unmodified 1182.5894 0.58940393 3135 Q86TG7 PEG10 Retrotransposon-derived protein PEG10 yes yes 0 0 1 By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 2 1 1 1 1 1 1 1 1 14.549 14.699 3 0.0030045 14566 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 57.59 30.917 337190000 0 0 0 22097000 6860800 23375000 19604000 16164000 15425000 30637000 33585000 52611000 22452000 26564000 67814000 22346 3135 20403 187680;187681;187682;187683;187684;187685;187686;187687;187688;187689;187690;187691;187692 149517;149518;149519;149520;149521;149522;149523;149524;149525;149526;149527 149520 9 HVFGESDELIGQK Unmodified 1457.7151 0.71505795 1808 P60174 TPI1 Triosephosphate isomerase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.04 3.41 6 1 21 3 2 2 2 2 1 1 2 1 1 3 2 1 2 3 53.467 52.653 2;3 6.6002E-17 57426 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 136.84 126.84 1367600000 47946000 51724000 151100000 55702000 6293500 8964000 6180100 14608000 4412600 7608600 209240000 180780000 7288900 130720000 484980000 22347 1808 20404 187693;187694;187695;187696;187697;187698;187699;187700;187701;187702;187703;187704;187705;187706;187707;187708;187709;187710;187711;187712;187713;187714;187715;187716;187717;187718;187719;187720 149528;149529;149530;149531;149532;149533;149534;149535;149536;149537;149538;149539;149540;149541;149542;149543;149544;149545;149546;149547;149548;149549;149550;149551 149534 20 HVFGQAVK Unmodified 884.48684 0.48683634 5008 Q9ULV4 CORO1C Coronin-1C yes yes 0 0 0 By MS/MS 10 0 1 1 16.691 17.205 2 0.031664 16349 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.787 27.619 4590300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4590300 22348 5008 20405 187721 149552 149552 1 HVFLTGPPGVGK Unmodified 1207.6713 0.67134264 4125 Q9BSD7 NTPCR Cancer-related nucleoside-triphosphatase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 54.209 54.344 2;3 3.2392E-07 60984 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 121.73 98.304 272980000 0 0 0 15332000 15147000 23621000 21772000 20309000 16899000 24971000 21521000 36877000 18034000 17586000 40912000 22349 4125 20406 187722;187723;187724;187725;187726;187727;187728;187729;187730;187731;187732;187733;187734;187735;187736;187737;187738;187739;187740;187741;187742;187743;187744;187745 149553;149554;149555;149556;149557;149558;149559;149560;149561;149562;149563;149564;149565;149566;149567;149568;149569;149570;149571;149572;149573;149574;149575 149568 16 HVGDLGNVTADK Unmodified 1224.6099 0.6098646 725 P00441 SOD1 Superoxide dismutase [Cu-Zn] yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 1 2 2 2 1 1 2 2 2 2 29.179 29.421 2;3 7.786E-34 30508 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 184.55 138.09 456230000 0 0 0 13880000 1479200 6748400 7031300 8671900 2168100 12317000 68435000 86171000 0 56409000 192920000 22350 725 20407 187746;187747;187748;187749;187750;187751;187752;187753;187754;187755;187756;187757;187758;187759;187760;187761;187762;187763 149576;149577;149578;149579;149580;149581;149582;149583;149584;149585;149586;149587;149588;149589;149590;149591 149579 14 HVGNQQYNVTYVVK Unmodified 1647.8369 0.83690442 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 5.73 3.91 5 1 5 2 2 2 1 1 1 1 1 52.002 48.727 2;3 5.766E-24 61256 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 128.68 121.47 697840000 510720000 59560000 94312000 0 0 0 0 0 0 0 8075300 6441100 0 4354000 14378000 22351 487 20408 187764;187765;187766;187767;187768;187769;187770;187771;187772;187773;187774 149592;149593;149594;149595;149596;149597;149598;149599;149600;149601;149602;149603 149602 10 HVHPTTAPDVTSSLPEEK Unmodified 1943.9589 0.95887005 2990 Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein yes yes 0 0 0 By MS/MS 2 0 1 1 53.157 45.142 4 0.037381 62150 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 19.791 12.199 5626700 5626700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22352 2990 20409 187775 149604 149604 1 HVIADQEVMETNRVESVEPSENEASK Unmodified 2926.3614 0.36144399 4376 Q9H307 PNN Pinin yes yes 0 0 1 By MS/MS 2 0 1 1 59.209 55.406 4 6.0651E-05 69052 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 52.97 46.875 10792000 0 0 10792000 0 0 0 0 0 0 0 0 0 0 0 0 22353 4376 20410 187776 149605;149606 149606 2 HVIDFFK Unmodified 904.48069 0.48068833 4639 Q9NTZ6 RBM12 RNA-binding protein 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 63.984 63.459 2 0.023384 71468 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 88.029 79.346 162090000 13474000 0 0 0 0 17506000 9086500 7189800 9770100 10380000 7834000 14609000 12477000 14824000 44941000 22354 4639 20411 187777;187778;187779;187780;187781;187782;187783;187784;187785;187786;187787 149607;149608;149609;149610 149610 4 HVIECAK Unmodified 855.42727 0.42727255 1474 P43246 MSH2 DNA mismatch repair protein Msh2 yes yes 0 0 0 By MS/MS By matching By MS/MS 2 0 3 1 1 1 8.1008 5.063 2 0.021122 6762 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 110.63 43.64 489510000 86889000 111940000 290680000 0 0 0 0 0 0 0 0 0 0 0 0 22355 1474 20412 187788;187789;187790 149611;149612;149613;149614;149615 149615 5 HVILSEIK Unmodified 937.55967 0.55966693 4089 Q9BQ70 TCF25 Transcription factor 25 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 40.452 40.614 2 0.00377 43529 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 133.12 74.135 144880000 0 0 0 8258600 7039000 12402000 13791000 9617600 10503000 13209000 19779000 18677000 0 11305000 20301000 22356 4089 20413 187791;187792;187793;187794;187795;187796;187797;187798;187799;187800;187801 149616;149617;149618;149619;149620;149621;149622 149618 2 HVIPMNPNTDDLFK Oxidation (M) 1655.7977 0.79774172 986 P13797 PLS3 Plastin-3 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 18 1 2 1 1 2 2 1 2 2 1 1 2 63.323 63.451 2;3 0.00020644 72670 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 78.655 67.436 259710000 0 0 0 8703500 11769000 7951800 10886000 26512000 18773000 7492300 26287000 40367000 16532000 18728000 65705000 22357 986 20414 187802;187803;187804;187805;187806;187807;187808;187809;187810;187811;187812;187813;187814;187815;187816;187817;187818;187819 149623;149624;149625;149626;149627;149628;149629;149630 149627 1331 3 HVIPMNPNTDDLFK Unmodified 1639.8028 0.8028271 986 P13797 PLS3 Plastin-3 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS 7.33 3.77 2 4 1 1 1 1 2 70.864 69.027 2;3 2.7636E-05 85140 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 112.94 97.398 69679000 7271200 0 3054100 0 0 0 0 0 0 3125400 0 6606000 0 0 49622000 22358 986 20414 187820;187821;187822;187823;187824;187825 149631;149632;149633 149631 3 HVITLSQR Unmodified 952.54541 0.54541385 273 O15344 MID1 E3 ubiquitin-protein ligase Midline-1 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 24.052 24.052 2 0.036499 24019 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 51.854 8.8542 2543400 0 0 0 0 892690 0 0 0 0 0 0 0 0 1650700 0 22359 273 20415 187826;187827 149634 149634 1 HVLEDSPAGK Unmodified 1051.5298 0.52982336 568 O75970 MPDZ Multiple PDZ domain protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.69 1 1 3 1 1 1 1 1 16.924 13.924 2 0.0095715 17247 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 76.17 47.02 14520000 0 2323100 12197000 0 0 0 0 0 0 0 0 0 0 0 0 22360 568 20416 187828;187829;187830;187831;187832 149635;149636;149637;149638;149639;149640 149639 6 HVLFPLK Unmodified 852.52216 0.52215921 1740 P54577 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 59.996 58.386 2 0.022164 64447 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 105.42 57.177 149560000 72904000 25890000 0 0 0 0 5237600 7696800 6312300 0 11981000 0 7533700 12002000 0 22361 1740 20417 187833;187834;187835;187836;187837;187838;187839;187840 149641;149642;149643;149644;149645;149646;149647 149645 6 HVLLTIK Unmodified 822.53272 0.5327239 2632 Q16763 UBE2S Ubiquitin-conjugating enzyme E2 S yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 42.397 42.69 2 0.024701 46035 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.263 27.726 37677000 0 0 0 0 0 0 2954100 4314800 2816800 6106400 5410800 0 5319400 4482000 6272500 22362 2632 20418 187841;187842;187843;187844;187845;187846;187847;187848;187849 149648;149649;149650;149651;149652;149653 149650 6 HVLNLLDEIENIK Unmodified 1548.8512 0.8511575 3733 Q96A65 EXOC4 Exocyst complex component 4 yes yes 0 0 0 By MS/MS 3 0 1 1 95.401 92.145 3 0.021821 110354 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 26.541 17.004 2124200 0 2124200 0 0 0 0 0 0 0 0 0 0 0 0 0 22363 3733 20419 187850 149654 149654 1 HVLSVLSK Unmodified 881.53345 0.53345218 1547 P48637 GSS Glutathione synthetase yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 2 37.742 38.013 2 0.012173 40167 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.243 34.671 28056000 0 0 0 2504700 867890 0 0 1800900 0 0 4564400 5575500 0 0 12742000 22364 1547 20420 187851;187852;187853;187854;187855;187856;187857 149655;149656;149657 149655 3 HVLTGSADNSCR Unmodified 1315.5939 0.59389696 2273 Q13347 EIF3I Eukaryotic translation initiation factor 3 subunit I yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 2 2 2 2 1 1 1 2 2 2 2 10.37 10.479 2;3 0.0046344 8351 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.916 48.215 35495000 0 0 0 2864200 1436300 2448200 2386800 1127400 997370 954320 0 7771300 3755300 4723400 7030600 22365 2273 20421 187858;187859;187860;187861;187862;187863;187864;187865;187866;187867;187868;187869;187870;187871;187872;187873;187874;187875;187876 149658;149659;149660;149661;149662;149663 149660 6 HVLTGSADNSCRLWDCETGK Unmodified 2305.0216 0.021563438 2273 Q13347 EIF3I Eukaryotic translation initiation factor 3 subunit I yes yes 0 0 1 By MS/MS 2 0 2 2 61.811 53.556 3;4 0.0067098 72549 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 28.333 20.045 16207000 16207000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22366 2273 20422 187877;187878 149664;149665 149665 2 HVLTSHIDEPPTQNQSDLLNK Unmodified 2385.1925 0.19245182 3098 Q7Z4H7 HAUS6 HAUS augmin-like complex subunit 6 yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 63.209 56.422 3;4 5.3742E-05 75931 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.998 58.998 29262000 27957000 0 1304700 0 0 0 0 0 0 0 0 0 0 0 0 22367 3098 20423 187879;187880;187881 149666;149667 149666 1 HVLVTLGEK Unmodified 994.58113 0.58113065 1813 P60660 MYL6 Myosin light polypeptide 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.53 1.88 1 16 1 2 2 1 1 2 1 2 1 1 1 1 1 40.31 40.171 2 0.00040925 44756 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 146.81 110.94 3885400000 0 0 6323500 155970000 243570000 255980000 252890000 249680000 195340000 288410000 475440000 591910000 319340000 294360000 556200000 22368 1813 20424 187882;187883;187884;187885;187886;187887;187888;187889;187890;187891;187892;187893;187894;187895;187896;187897;187898 149668;149669;149670;149671;149672;149673;149674;149675;149676;149677;149678;149679;149680;149681;149682;149683;149684;149685;149686;149687;149688;149689;149690;149691;149692;149693;149694;149695;149696;149697;149698;149699;149700;149701;149702;149703;149704 149686 37 HVMDGSLPTSLK Unmodified 1283.6544 0.65437195 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 2 1 1 2 2 2 2 51.598 51.877 2;3 0.00035817 57316 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.865 42.717 87325000 0 0 0 0 0 11654000 2556100 2414900 0 15295000 13144000 0 0 12856000 29406000 22369 3119 20425 187899;187900;187901;187902;187903;187904;187905;187906;187907;187908;187909;187910 149705;149706;149707;149708 149706 3 HVMDGSLPTSLK Oxidation (M) 1299.6493 0.64928657 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 1 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 39.836 40.053 2 0.00061978 44313 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 72.321 48.892 73566000 0 0 0 0 3519200 0 6657900 3755100 0 9469500 13615000 0 9183700 6415300 20951000 22370 3119 20425 187911;187912;187913;187914;187915;187916;187917;187918 149709;149710;149711;149712;149713 149710 4731 5 HVMDVVDEELSK Unmodified 1399.6653 0.66533057 1379 P36776 LONP1 Lon protease homolog, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 1 2 68.048 63.597 2;3 4.2568E-22 81656 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 161.62 134.14 36510000 0 27962000 8548600 0 0 0 0 0 0 0 0 0 0 0 0 22371 1379 20426 187919;187920;187921 149714;149715;149716 149714 3 HVMDVVDEELSK Oxidation (M) 1415.6602 0.66024519 1379 P36776 LONP1 Lon protease homolog, mitochondrial yes yes 0 1 0 By MS/MS By MS/MS 2 0 3 1 2 49.514 45.605 2 0.0022935 59502 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.355 56.956 8986400 0 0 8986400 0 0 0 0 0 0 0 0 0 0 0 0 22372 1379 20426 187922;187923;187924 149717;149718;149719 149717 2138 3 HVMQLEK Oxidation (M) 899.45349 0.4534873 2852 Q68CP9 ARID2 AT-rich interactive domain-containing protein 2 yes yes 0 1 0 By MS/MS By MS/MS 3 0 2 1 1 9.3031 5.7317 2 0.02562 7742 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 94.662 21.624 4106900 315670 3791200 0 0 0 0 0 0 0 0 0 0 0 0 0 22373 2852 20427 187925;187926 149720 149720 1 HVMQLEK Unmodified 883.45857 0.45857268 2852 Q68CP9 ARID2 AT-rich interactive domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 22.928 18.993 2 0.020673 27372 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 111.82 49.099 171690000 134520000 12775000 24392000 0 0 0 0 0 0 0 0 0 0 0 0 22374 2852 20427 187927;187928;187929 149721;149722 149721 2 HVMQPYYK Oxidation (M) 1080.5063 0.50625115 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 1 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 16.807 16.988 2 0.016765 16686 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 58.687 46.331 71956000 0 0 0 2374700 2935600 4272100 4091000 0 1909400 4278900 8694200 12719000 8534000 7552400 14595000 22375 1986 20428 187930;187931;187932;187933;187934;187935;187936;187937;187938;187939;187940 149723;149724;149725;149726;149727 149724 3218 4 HVMQPYYK Unmodified 1064.5113 0.51133653 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 24.628 25.302 2 0.011863 25745 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 117.93 86.644 50445000 0 0 0 0 0 0 0 0 0 0 0 11400000 0 0 39045000 22376 1986 20428 187941;187942 149728;149729 149728 1 HVNPVQALSEFK Unmodified 1367.7197 0.7197494 1340 P35221 CTNNA1 Catenin alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.38 3.18 5 1 23 3 1 2 1 2 2 2 2 2 2 2 2 2 2 2 74.944 73.983 2;3 4.3058E-20 85000 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 162.21 125.97 1193300000 594190000 153860000 37096000 5007700 9543100 50244000 17249000 21823000 30205000 44261000 33652000 32560000 28881000 33080000 101660000 22377 1340 20429 187943;187944;187945;187946;187947;187948;187949;187950;187951;187952;187953;187954;187955;187956;187957;187958;187959;187960;187961;187962;187963;187964;187965;187966;187967;187968;187969;187970;187971 149730;149731;149732;149733;149734;149735;149736;149737;149738;149739;149740;149741;149742;149743;149744;149745;149746;149747;149748;149749;149750;149751;149752 149730 18 HVNQLQTK Unmodified 966.52468 0.52467841 2977 Q6UVJ0 SASS6 Spindle assembly abnormal protein 6 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 6.5473 6.1434 2 0.012191 6510 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 105.25 81.277 129670000 89580000 0 30497000 1014500 0 0 2063500 1861100 0 788030 748310 825630 723940 666850 902320 22378 2977 20430 187972;187973;187974;187975;187976;187977;187978;187979;187980;187981;187982 149753;149754;149755 149755 3 HVNTNPLCDLTPIFK Unmodified 1767.8978 0.89779012 4978 Q9UKX7 NUP50 Nuclear pore complex protein Nup50 yes yes 0 0 0 By MS/MS 2 0 1 1 93.357 85.226 3 0.0001651 110334 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.707 85.906 24457000 24457000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22379 4978 20431 187983 149756 149756 1 HVPCVEDEDFIQALDK Unmodified 1913.8829 0.88292792 4490 Q9HAU5 UPF2 Regulator of nonsense transcripts 2 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 84.084 80.588 3 3.699E-06 100702 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.344 89.423 51214000 0 46493000 4721100 0 0 0 0 0 0 0 0 0 0 0 0 22380 4490 20432 187984;187985;187986 149757;149758;149759 149757 3 HVPGGGNVQIQNK Unmodified 1346.7055 0.70549632 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 6 2 24 2 4 2 2 2 2 2 2 2 2 2 2 2 2 2 22.856 21.948 2;3 3.0627E-08 22696 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 82.171 52.83 1953200000 1135000000 204330000 49079000 36691000 20595000 49014000 36646000 29400000 28662000 63163000 51419000 73357000 49303000 39937000 86597000 22381 1226 20433 187987;187988;187989;187990;187991;187992;187993;187994;187995;187996;187997;187998;187999;188000;188001;188002;188003;188004;188005;188006;188007;188008;188009;188010;188011;188012;188013;188014;188015;188016;188017;188018 149760;149761;149762;149763;149764;149765;149766;149767;149768;149769;149770;149771;149772;149773;149774;149775;149776;149777;149778;149779;149780;149781;149782 149781 21 HVPLSGSQIVK Unmodified 1163.6663 0.66625727 286 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 37.892 38.021 2 0.025565 42960 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 61.962 42.868 92367000 0 0 0 6285700 7055700 7979400 11067000 8214000 6709400 9106900 10569000 0 7725400 7026900 10627000 22382 286 20434 188019;188020;188021;188022;188023;188024;188025;188026;188027;188028;188029 149783;149784 149784 1 HVPTHFSQQNSSK Unmodified 1495.7168 0.71678929 3000 Q6ZN18 AEBP2 Zinc finger protein AEBP2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 12.089 12.166 3 0.0030893 9995 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.929 42.474 27318000 0 0 0 1613000 1882900 3185800 2860000 3649100 0 0 0 0 3302400 2863100 7961400 22383 3000 20435 188030;188031;188032;188033;188034;188035;188036;188037 149785;149786;149787;149788 149787 4 HVQDIDVGPTHVVEK Unmodified 1671.858 0.8580338 2799 Q5THJ4 VPS13D Vacuolar protein sorting-associated protein 13D yes yes 0 0 0 By MS/MS 2 0 1 1 47.418 43.538 3 0.020918 55136 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 30.961 18.938 1776200 0 0 1776200 0 0 0 0 0 0 0 0 0 0 0 0 22384 2799 20436 188038 149789 149789 0 HVQGILR Unmodified 821.48717 0.48717069 38 P62308;A8MWD9 SNRPG;SNRPGP15 Small nuclear ribonucleoprotein G;Putative small nuclear ribonucleoprotein G-like protein 15 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 20.719 20.923 2 0.020126 21980 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 102.98 33.59 3816400000 0 0 0 273880000 198880000 385980000 223660000 252850000 349710000 291170000 357250000 531960000 304680000 258590000 387750000 22385 38 20437 188039;188040;188041;188042;188043;188044;188045;188046;188047;188048;188049;188050;188051;188052;188053;188054;188055;188056;188057;188058;188059;188060;188061;188062 149790;149791;149792;149793;149794;149795;149796;149797;149798;149799 149792 8 HVQGSLQTR Unmodified 1024.5414 0.5413911 4982 Q9UL03 INTS6 Integrator complex subunit 6 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 7.8702 7.9904 2 0.0094557 5312 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.682 55.613 16398000 0 0 0 676990 902360 1020200 565810 1474100 1011100 2112700 2234400 1884300 0 1647200 2869300 22386 4982 20438 188063;188064;188065;188066;188067;188068;188069;188070;188071;188072;188073 149800;149801;149802 149801 3 HVQGWPADHAEK Unmodified 1373.6476 0.64764709 4138 Q9BTA9 WAC WW domain-containing adapter protein with coiled-coil yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 2 1 1 1 1 1 1 1 1 1 21.728 20.914 2;3 0.0003179 32339 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.55 82.779 401260000 119240000 0 0 816370 0 38749000 0 22567000 20475000 34348000 38462000 27637000 49745000 49219000 0 22387 4138 20439 188074;188075;188076;188077;188078;188079;188080;188081;188082;188083;188084 149803;149804;149805;149806;149807;149808;149809;149810;149811 149808 8 HVQSLEPDPGTPGSER Unmodified 1704.8067 0.80672651 4715 Q9NX46 ADPRHL2 Poly(ADP-ribose) glycohydrolase ARH3 yes yes 0 0 0 By MS/MS 10 0 1 1 33.523 34.245 3 0.011584 36337 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.341 21.396 44352000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44352000 22388 4715 20440 188085 149812 149812 1 HVSDDMK Unmodified 830.35925 0.35925256 2055 Q01518 CAP1 Adenylyl cyclase-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 4.3116 1.3936 2 0.024826 1456 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 101.64 79.021 91106000 0 61386000 29720000 0 0 0 0 0 0 0 0 0 0 0 0 22389 2055 20441 188086;188087;188088 149813;149814 149814 2 HVSNAPLTK Unmodified 965.52943 0.52942943 3475 Q8TAQ2 SMARCC2 SWI/SNF complex subunit SMARCC2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.33 3.77 4 8 2 1 1 1 1 1 1 1 1 1 1 11.126 10.034 2 4.964E-07 12450 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 161.27 111.91 1875900000 964980000 478140000 367230000 7011600 5366900 8887800 10458000 6638600 6691400 0 10738000 0 9717500 0 0 22390 3475 20442 188089;188090;188091;188092;188093;188094;188095;188096;188097;188098;188099;188100 149815;149816;149817;149818;149819;149820;149821;149822;149823;149824;149825;149826;149827 149824 12 HVSPAGAAVGIPLSEDEAK Unmodified 1846.9425 0.94249171 1307 P31939 ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.33 3.82 7 2 6 2 4 3 1 1 1 1 2 67.002 63.926 2;3 1.2371E-17 77753 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 107.57 97.649 3374900000 152120000 2181600000 842250000 0 0 0 0 6357600 0 0 31896000 26115000 0 16902000 117690000 22391 1307 20443 188101;188102;188103;188104;188105;188106;188107;188108;188109;188110;188111;188112;188113;188114;188115 149828;149829;149830;149831;149832;149833;149834;149835;149836;149837;149838;149839;149840;149841;149842;149843;149844;149845;149846;149847 149836 19 HVSSETDESCK Unmodified 1277.5194 0.51939461 3942 Q96P16 RPRD1A Regulation of nuclear pre-mRNA domain-containing protein 1A yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 5.5993 2.2984 2 6.4409E-158 4341 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 253.91 237.44 75221000 0 75221000 0 0 0 0 0 0 0 0 0 0 0 0 0 22392 3942 20444 188116;188117 149848;149849 149848 2 HVTFNQVK Unmodified 971.51886 0.51886475 1155 P23381 WARS Tryptophan--tRNA ligase, cytoplasmic;T1-TrpRS;T2-TrpRS yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 5.4 3.77 4 2 4 3 2 1 1 1 1 1 25.073 22.454 2 0.002392 31410 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.52 89.428 2033600000 1190700000 521150000 236860000 0 0 0 0 0 8372200 0 34173000 0 16812000 25486000 0 22393 1155 20445 188118;188119;188120;188121;188122;188123;188124;188125;188126;188127 149850;149851;149852;149853;149854;149855;149856;149857;149858;149859;149860;149861;149862 149850 13 HVTNPAFTK Unmodified 1013.5294 0.52942943 3687 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.53 3 2 11 2 2 1 1 1 1 1 1 1 1 1 1 1 1 20.677 19.49 2 2.1645E-06 25016 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 166.07 124.41 1915600000 1282000000 208230000 252220000 10165000 10703000 17820000 11112000 13224000 9359600 26501000 18422000 21675000 17268000 16873000 0 22394 3687 20446 188128;188129;188130;188131;188132;188133;188134;188135;188136;188137;188138;188139;188140;188141;188142;188143 149863;149864;149865;149866;149867;149868;149869;149870;149871;149872;149873;149874 149867 6 HVTSECLGWMR Unmodified 1374.6173 0.61727494 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS 10 0 2 2 55.088 54.431 2;3 0.0022483 62373 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 46.64 38.536 13721000 0 0 0 13721000 0 0 0 0 0 0 0 0 0 0 0 22395 1029 20447 188144;188145 149875;149876 149875 2 HVTTAEGTPGTTDQEGPPPDGPPEK Unmodified 2514.151 0.15104051 183 O14497 ARID1A AT-rich interactive domain-containing protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 36.462 35.861 3 1.7883E-18 45115 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.602 73.981 86790000 0 26004000 0 5312300 4282500 5667100 4904000 2803400 3497300 4423500 5559200 6580900 0 7013900 10742000 22396 183 20448 188146;188147;188148;188149;188150;188151;188152;188153;188154;188155;188156;188157;188158 149877;149878;149879;149880;149881;149882;149883;149884;149885;149886;149887;149888;149889;149890;149891;149892;149893 149881 16 HVTVVGELSR Unmodified 1095.6037 0.60365701 4612 Q9NRW7 VPS45 Vacuolar protein sorting-associated protein 45 yes yes 0 0 0 By MS/MS 10 0 1 1 37.209 37.945 2 0.042395 41018 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.305 17.219 3512700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3512700 22397 4612 20449 188159 149894 149894 1 HVVFGFVK Unmodified 931.52797 0.52797287 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 58.619 58.85 2 0.0066136 65528 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 99.384 77.837 39649000 0 0 0 0 0 6249900 3653800 4553500 5395100 3560600 3876500 0 0 0 12359000 22398 1601 20450 188160;188161;188162;188163;188164;188165;188166 149895;149896;149897;149898;149899;149900;149901 149898 7 HVVFGQVIK Unmodified 1025.6022 0.60220045 2162 Q08752 PPID Peptidyl-prolyl cis-trans isomerase D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 52.275 50.978 2 0.001678 73871 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 134.06 92.554 105250000 45496000 0 0 0 0 0 0 4324000 0 8512200 0 12825000 0 0 34093000 22399 2162 20451 188167;188168;188169;188170;188171;188172;188173 149902;149903;149904;149905;149906;149907;149908 149905 7 HVVFIAQR Unmodified 968.55558 0.55558461 1871 P62081 RPS7 40S ribosomal protein S7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.889 36.069 2 0.016585 40554 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 67.035 53.259 183360000 0 0 0 10122000 8111600 11495000 10457000 9405400 8656200 14686000 12266000 35991000 11186000 15562000 35426000 22400 1871 20452 188174;188175;188176;188177;188178;188179;188180;188181;188182;188183;188184;188185 149909;149910;149911;149912;149913;149914;149915;149916;149917 149917 9 HVVLGAIENK Unmodified 1078.6135 0.61349341 1435 P41227 NAA10 N-alpha-acetyltransferase 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 37.373 37.46 2 0.0013902 40969 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 106.93 93.278 387100000 0 0 0 3173400 3664000 4394500 23270000 29248000 20897000 53124000 107030000 142300000 0 0 0 22401 1435 20453 188186;188187;188188;188189;188190;188191;188192;188193;188194 149918;149919;149920;149921;149922;149923;149924;149925;149926;149927 149919 10 HVVLGAIENKVESK Unmodified 1521.8515 0.85149185 1435 P41227 NAA10 N-alpha-acetyltransferase 10 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 48.5 49.085 3 2.4638E-22 54614 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 145.52 123.58 70261000 0 0 0 0 0 0 0 0 0 0 8298000 61963000 0 0 0 22402 1435 20454 188195;188196 149928 149928 1 HVVLGSLPGK Unmodified 1005.5971 0.59711507 4517 Q9HCK8 CHD8 Chromodomain-helicase-DNA-binding protein 8 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 42.142 42.543 2 0.0015698 46597 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 93.374 67.435 21092000 0 0 0 0 0 4521800 3647400 0 0 0 0 7443800 0 0 5478600 22403 4517 20455 188197;188198;188199;188200 149929;149930 149930 2 HVVLYPLVAK Unmodified 1137.691 0.69101545 123 O00170 AIP AH receptor-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 68.449 67.384 2 6.4361E-06 90049 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.57 117.16 153280000 62771000 17324000 7560200 0 0 8848700 4040900 3061300 3078900 5162000 5566700 6960600 5386700 5410100 18112000 22404 123 20456 188201;188202;188203;188204;188205;188206;188207;188208;188209;188210;188211;188212;188213 149931;149932;149933;149934;149935;149936;149937;149938;149939;149940;149941;149942 149934 12 HVVPLPDGK Unmodified 960.53927 0.53926584 2838 Q63HN8 RNF213 E3 ubiquitin-protein ligase RNF213 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.31 3.1 1 2 10 1 1 1 1 1 1 1 1 1 1 1 1 1 35.369 34.48 2 0.00080005 44351 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 145.63 125.08 112730000 448320 4536700 69261000 0 2428800 5833900 2958600 2508100 2501200 5061000 4174900 0 3954500 4198300 4864000 22405 2838 20457 188214;188215;188216;188217;188218;188219;188220;188221;188222;188223;188224;188225;188226 149943;149944;149945;149946;149947;149948;149949;149950;149951;149952 149950 10 HVVPNEVVVQR Unmodified 1274.7095 0.70951906 819 P06396;CON__Q3SX14 GSN Gelsolin yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 37.951 38.132 2;3 0.00021917 42101 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 82.417 60.424 + 383360000 0 0 0 46137000 25777000 24700000 26175000 32223000 17411000 33899000 38562000 46531000 34944000 25725000 31274000 22406 819 20458 188227;188228;188229;188230;188231;188232;188233;188234;188235;188236;188237;188238;188239;188240;188241;188242;188243;188244;188245;188246;188247;188248;188249;188250 149953;149954;149955;149956;149957;149958;149959;149960;149961;149962;149963;149964;149965;149966 149963 13 HVVQIVEK Unmodified 950.55492 0.5549159 621 O95104 SCAF4 Splicing factor, arginine/serine-rich 15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.29 3.65 3 2 9 2 2 1 1 1 1 1 1 1 1 1 1 25.283 23.797 2 0.0083413 35212 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 136.8 87.438 361230000 204510000 18685000 27655000 4689900 4232700 0 5389900 5852100 4219000 16645000 0 30573000 15463000 0 23311000 22407 621 20459 188251;188252;188253;188254;188255;188256;188257;188258;188259;188260;188261;188262;188263;188264 149967;149968;149969;149970;149971;149972;149973;149974 149971 8 HVVQSISTQQEK Unmodified 1382.7154 0.7153923 1175 P24539 ATP5F1 ATP synthase F(0) complex subunit B1, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 21.826 18.021 2 3.2454E-24 25891 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 172.56 158.26 12464000 9893100 0 2570700 0 0 0 0 0 0 0 0 0 0 0 0 22408 1175 20460 188265;188266 149975;149976 149975 2 HVVQSVEK Unmodified 924.50288 0.50288033 5050 Q9UPN6 SCAF8 Protein SCAF8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8 3.46 3 9 1 1 1 1 1 1 1 1 1 1 1 1 7.6531 7.0015 2 0.0053885 4610 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 116.25 62.696 175020000 37922000 43542000 44871000 0 3773300 4450100 0 5261900 4209100 5359700 9952900 0 5116000 2842800 7720100 22409 5050 20461 188267;188268;188269;188270;188271;188272;188273;188274;188275;188276;188277;188278 149977;149978;149979;149980;149981;149982 149978 5 HVVSPEQIATSDK Unmodified 1409.7151 0.71505795 4407 Q9H582 ZNF644 Zinc finger protein 644 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.564 36.746 2 0.00096842 39971 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 84.507 55.55 44517000 0 0 0 2067400 2623300 3973300 3203700 3809400 1859400 4350300 3658100 7023100 4849100 3249200 3850900 22410 4407 20462 188279;188280;188281;188282;188283;188284;188285;188286;188287;188288;188289;188290 149983;149984;149985;149986;149987;149988;149989;149990;149991;149992;149993 149991 11 HVVWHPSQELLASASYDDTVK Unmodified 2381.1652 0.16517443 575 O76071 CIAO1 Probable cytosolic iron-sulfur protein assembly protein CIAO1 yes yes 0 0 0 By MS/MS 3 0 2 2 78.632 75.261 3;4 0.0013868 90284 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 38.271 30.467 6918700 0 6918700 0 0 0 0 0 0 0 0 0 0 0 0 0 22411 575 20463 188291;188292 149994;149995 149994 2 HWELAGTK Unmodified 940.47667 0.47666558 3642 Q92620 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 yes yes 0 0 0 By MS/MS 2 0 1 1 36.175 32.791 2 0.012137 41352 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 102.51 59.514 8990100 0 0 8990100 0 0 0 0 0 0 0 0 0 0 0 0 22412 3642 20464 188293 149996 149996 1 HWGGNVLGPK Unmodified 1063.5563 0.55631289 1900 P62424 RPL7A 60S ribosomal protein L7a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 38.817 39.13 2 0.001544 43495 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 90.37 70.666 188500000 0 0 0 0 0 11104000 6963700 12140000 9523300 14437000 20622000 31902000 22773000 23860000 35180000 22413 1900 20465 188294;188295;188296;188297;188298;188299;188300;188301;188302;188303 149997;149998;149999;150000;150001;150002;150003;150004;150005;150006 150002 10 HWPFMVVNDAGRPK Oxidation (M) 1668.8195 0.81948022 934 P11142 HSPA8 Heat shock cognate 71 kDa protein yes yes 0 1 1 By MS/MS By MS/MS By matching By MS/MS 10 0 6 2 2 1 1 62.57 62.909 3 3.2633E-13 70529 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.97 103.9 122670000 0 0 0 0 0 15102000 0 0 0 0 0 31429000 0 2098600 74039000 22414 934 20466 188304;188305;188306;188307;188308;188309 150007;150008;150009;150010;150011;150012;150013;150014 150009 1212 7 HWPFMVVNDAGRPK Unmodified 1652.8246 0.8245656 934 P11142 HSPA8 Heat shock cognate 71 kDa protein yes yes 0 0 1 By MS/MS 10 0 1 1 70.997 71.432 3 5.612E-06 81583 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.891 59.478 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22415 934 20466 188310 150015 150015 1 HWPFQVINDGDK Unmodified 1454.6943 0.69426293 908 P0DMV9;P0DMV8 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 5.78 3.79 3 2 4 2 2 1 1 1 1 1 77.383 74.939 2;3 9.9744E-08 94888 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.215 89.928 78318000 22281000 33360000 1686700 0 0 2289600 0 0 3866000 0 0 0 0 3039300 11796000 22416 908 20467 188311;188312;188313;188314;188315;188316;188317;188318;188319 150016;150017;150018;150019;150020 150016 5 HWPFQVINDGDKPK Unmodified 1679.842 0.8419898 908 P0DMV9;P0DMV8 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS 7 3.91 1 1 1 5 2 1 1 1 3 75.224 74.642 3 9.0502E-14 76080 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 111.79 102.1 130380000 17273000 8831100 0 0 0 4200800 0 0 0 0 0 7525600 0 0 92549000 22417 908 20468 188320;188321;188322;188323;188324;188325;188326;188327 150021;150022;150023;150024;150025;150026;150027;150028 150021 8 HWVAPGGPYSAETPGVPSPIAALK Unmodified 2401.243 0.24303082 3213 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 83.785 83.976 3 1.0331E-06 96903 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.896 45.973 6666100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6666100 22418 3213 20469 188328 150029 150029 0 HYAMQEAK Unmodified 976.44365 0.44365089 2400 Q14257 RCN2 Reticulocalbin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 10.137 9.2328 2 0.0075386 6480 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.296 66.224 383570000 129200000 130540000 94094000 0 3276900 1896800 3392800 4478300 2132600 1493200 0 5286100 0 3188900 4582000 22419 2400 20470 188329;188330;188331;188332;188333;188334;188335;188336;188337;188338;188339;188340;188341 150030;150031;150032;150033;150034;150035;150036 150033 6 HYAMQEAK Oxidation (M) 992.43857 0.43856552 2400 Q14257 RCN2 Reticulocalbin-2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 2 2 1 8.0438 4.7975 2 0.012485 11599 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 95.909 70.911 235960000 87357000 140800000 7798200 0 0 0 0 0 0 0 0 0 0 0 0 22420 2400 20470 188342;188343;188344;188345;188346 150037;150038;150039 150039 3934 3 HYAPLQAYLR Unmodified 1230.6509 0.65094155 3915 Q96L91 EP400 E1A-binding protein p400 yes yes 0 0 0 By MS/MS 10 0 1 1 62.877 63.45 2 0.0064604 71862 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.836 45.05 9570400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9570400 22421 3915 20471 188347 150040 150040 1 HYASEEIK Unmodified 975.46616 0.46616048 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12.414 11.832 2 0.0012541 14801 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 166.17 115.2 607890000 16942000 366200000 148880000 2979500 2350700 7695200 4153400 0 3965500 6922200 6485600 11168000 5585600 5778000 18790000 22422 2047 20472 188348;188349;188350;188351;188352;188353;188354;188355;188356;188357;188358;188359;188360;188361;188362 150041;150042;150043;150044;150045;150046;150047;150048;150049;150050;150051;150052;150053;150054;150055;150056;150057;150058;150059 150053 17 HYCTVANPVSR Unmodified 1302.6139 0.61390412 2444 Q14764 MVP Major vault protein yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 27.588 28.157 2 0.018505 29238 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.492 15.094 15884000 0 0 0 0 0 0 0 0 0 0 0 7229600 0 3060500 5593500 22423 2444 20473 188363;188364;188365 150060 150060 1 HYEAVHDAGNDSGHGGESNLALK Unmodified 2377.0683 0.068313935 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 37.754 32.75 4 3.1227E-56 41015 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 131.18 122.47 21832000 11235000 0 10597000 0 0 0 0 0 0 0 0 0 0 0 0 22424 2495 20474 188366;188367 150061;150062;150063;150064 150064 4 HYEDAQVPLTNHK Unmodified 1550.7478 0.74775506 5285 Q9Y6I4 USP3 Ubiquitin carboxyl-terminal hydrolase 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 2 1 1 1 1 35.428 30.646 3 0.0099604 37946 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 39.016 30.765 85730000 19186000 5778200 60767000 0 0 0 0 0 0 0 0 0 0 0 0 22425 5285 20475 188368;188369;188370 150065;150066 150065 2 HYEDGYPGGSDNYGSLSR Unmodified 1972.8187 0.81874776 426 O60716 CTNND1 Catenin delta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 43.922 44.324 3 1.1917E-09 49829 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 69.188 67.271 33961000 0 0 0 0 0 9839000 0 0 0 0 0 24122000 0 0 0 22426 426 20476 188371;188372;188373;188374;188375;188376 150067;150068;150069;150070;150071;150072;150073;150074 150069 8 HYEGSTVPEK Unmodified 1145.5353 0.53530267 735 P00738 HP Haptoglobin;Haptoglobin alpha chain;Haptoglobin beta chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 11.337 11.41 2 0.00054799 10141 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 128.12 98.96 22624000 0 0 0 12999000 0 0 0 7110100 0 0 0 0 2515100 0 0 22427 735 20477 188377;188378;188379 150075;150076;150077 150077 3 HYEVEILDAK Unmodified 1215.6136 0.61355299 4756 Q9NZ01 TECR Very-long-chain enoyl-CoA reductase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching 8.4 3.2 1 4 1 1 1 1 1 55.966 55.811 2 0.012278 64288 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 111.61 94.769 15418000 0 0 0 6002500 4352700 0 0 0 968350 0 4094100 0 0 0 0 22428 4756 20478 188380;188381;188382;188383;188384 150078;150079;150080 150079 2 HYGFNEILK Unmodified 1119.5713 0.57129425 3485 Q8TC07 TBC1D15 TBC1 domain family member 15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 61.45 60.164 2 0.0077875 66291 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.501 47.978 75302000 42442000 0 4214500 0 0 4362900 0 0 2860500 0 0 2255100 5128700 4794500 9243700 22429 3485 20479 188385;188386;188387;188388;188389;188390;188391;188392;188393 150081;150082;150083;150084;150085;150086 150082 5 HYGGLTGLNK Unmodified 1058.5509 0.55089316 1077 P18669;P15259;Q8N0Y7 PGAM1;PGAM2;PGAM4 Phosphoglycerate mutase 1;Phosphoglycerate mutase 2;Probable phosphoglycerate mutase 4 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 30.031 30.277 2 0.00093683 33269 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 111.82 76.202 570660000 0 0 0 12606000 0 10783000 9901800 15069000 10123000 13773000 58095000 99461000 13110000 61826000 265920000 22430 1077 20480 188394;188395;188396;188397;188398;188399;188400;188401;188402;188403;188404 150087;150088;150089;150090;150091;150092;150093;150094;150095;150096;150097;150098 150087 10 HYGITSPISLAAPK Unmodified 1453.7929 0.79291434 1644 P51003 PAPOLA Poly(A) polymerase alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 78.89 72.95 2;3 0.0011039 93007 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.224 51.598 108970000 77860000 27357000 3750700 0 0 0 0 0 0 0 0 0 0 0 0 22431 1644 20481 188405;188406;188407;188408 150099;150100;150101;150102;150103 150099 5 HYGITSPISLASPK Unmodified 1469.7878 0.78782897 4213 Q9BWT3 PAPOLG Poly(A) polymerase gamma yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS 8.4 3.2 1 4 1 1 1 1 1 71.05 69.671 3 0.012566 79228 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 23.956 9.7761 17574000 8090700 0 0 0 0 0 0 0 0 1203500 2532100 1693800 0 0 4053600 22432 4213 20482 188409;188410;188411;188412;188413 150104;150105 150104 2 HYGPGVR Unmodified 784.39802 0.39802133 3019 Q6ZVX7 NCCRP1 F-box only protein 50 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 10.001 10.117 2 0.023796 8624 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 93.763 77.609 84084000 0 0 0 38027000 0 6324500 6717500 12182000 0 7722500 0 0 7239300 5020700 850570 22433 3019 20483 188414;188415;188416;188417;188418;188419;188420;188421 150106;150107 150106 1 HYGPGWVSMANAGK Unmodified 1473.6823 0.68231804 1153 P23284 PPIB Peptidyl-prolyl cis-trans isomerase B yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS 8.4 3.2 3 12 2 1 1 1 1 1 1 1 1 1 1 1 2 57.932 56.608 2;3 0.00049553 62559 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.836 47.966 344780000 225980000 31482000 0 1713300 0 3443900 2500300 4526300 2346900 3147900 7279900 9929500 3800100 8517200 40108000 22434 1153 20484 188422;188423;188424;188425;188426;188427;188428;188429;188430;188431;188432;188433;188434;188435;188436 150108;150109;150110;150111;150112;150113;150114;150115;150116 150111 7 HYGPGWVSMANAGK Oxidation (M) 1489.6772 0.67723266 1153 P23284 PPIB Peptidyl-prolyl cis-trans isomerase B yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 4 3.46 3 1 1 1 1 1 45.954 41.82 2;3 0.00030345 58418 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.392 69.475 235530000 184040000 31119000 4209500 0 0 0 0 0 0 0 0 0 0 0 16159000 22435 1153 20484 188437;188438;188439;188440 150117;150118 150118 1662 1 HYGVYSCEGCK Unmodified 1358.5384 0.53835592 1237;1095 P19793;P48443;P28702 RXRA;RXRG;RXRB Retinoic acid receptor RXR-alpha;Retinoic acid receptor RXR-gamma;Retinoic acid receptor RXR-beta no no 0 0 0 By MS/MS 2 0 1 1 22.606 19.74 2 0.037019 25142 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 50.607 50.607 2144700 0 0 2144700 0 0 0 0 0 0 0 0 0 0 0 0 22436 1095;1237 20485 188441 150119 150119 1 HYGYSLYSAIK Unmodified 1300.6452 0.64518747 968 P12429 ANXA3 Annexin A3 yes yes 0 0 0 By MS/MS 2 0 1 1 71.311 63.044 2 0.041487 84127 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.711 48.378 12476000 12476000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22437 968 20486 188442 150120 150120 0 HYILNGSK Unmodified 930.49232 0.49231565 4445 Q9H845 ACAD9 Acyl-CoA dehydrogenase family member 9, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 24.376 19.4 2 0.021679 27595 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.368 41.368 8801400 8801400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22438 4445 20487 188443 150121 150121 1 HYIVLLASAPTEK Unmodified 1440.7977 0.79766537 1644 P51003 PAPOLA Poly(A) polymerase alpha yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 76.012 70.471 3 2.7822E-18 92480 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 100.04 90.843 15110000 11223000 0 3886600 0 0 0 0 0 0 0 0 0 0 0 0 22439 1644 20488 188444;188445 150122;150123;150124 150123 3 HYLDINTVLEK Unmodified 1343.7085 0.70851601 2838 Q63HN8 RNF213 E3 ubiquitin-protein ligase RNF213 yes yes 0 0 0 By MS/MS 2 0 1 1 80.013 71.882 2 3.6726E-09 94431 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 136.02 82.266 10275000 10275000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22440 2838 20489 188446 150125;150126 150125 2 HYLFYDGESVSGK Unmodified 1500.6885 0.68850885 498 O75436 VPS26A Vacuolar protein sorting-associated protein 26A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3.6 3.2 8 2 3 2 3 1 1 64.048 59.347 2;3 5.3273E-08 79852 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 125.28 119.8 425840000 227720000 102600000 72211000 0 0 0 0 0 0 0 9908200 0 0 0 13393000 22441 498 20490 188447;188448;188449;188450;188451;188452;188453;188454;188455;188456 150127;150128;150129;150130;150131;150132;150133;150134;150135 150131 6 HYLSEELR Unmodified 1045.5193 0.51925868 3047 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 34.031 34.271 2 0.030437 37496 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 55.531 40.995 86571000 0 0 0 3964200 0 8513400 7124600 5284000 4461700 6699300 8477600 11586000 8431000 8816200 13213000 22442 3047 20491 188457;188458;188459;188460;188461;188462;188463;188464;188465;188466;188467 150136;150137;150138;150139;150140;150141 150136 6 HYNEEGSQVYNDAHILEK Unmodified 2144.9763 0.97631103 3143 Q86U86 PBRM1 Protein polybromo-1 yes yes 0 0 0 By MS/MS 10 0 1 1 52.522 53.199 3 0.00014876 59393 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.578 33.169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22443 3143 20492 188468 150142 150142 1 HYNGEAYEDDEHHPR Unmodified 1867.751 0.75100254 1303 P31689 DNAJA1 DnaJ homolog subfamily A member 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 2 1 2 13.336 13.724 3;4 0.029239 12049 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 27.85 27.219 38480000 0 0 0 0 0 0 0 0 0 0 2390000 10276000 4475100 0 21339000 22444 1303 20493 188469;188470;188471;188472;188473;188474 150143;150144 150143 1 HYNKFYNDYGDIIK Unmodified 1788.8471 0.84713476 4935 Q9UJ98 STAG3 Cohesin subunit SA-3 yes yes 0 0 1 By MS/MS 2 0 1 1 60.728 54.87 2 0.014338 70448 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.898 51.484 18967000 0 18967000 0 0 0 0 0 0 0 0 0 0 0 0 0 22445 4935 20494 188475 150145 150145 1 HYPVFENPK Unmodified 1129.5556 0.55564418 1766 P55265 ADAR Double-stranded RNA-specific adenosine deaminase yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 37.976 38.162 2 0.0051376 42195 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 82.452 57.558 68958000 0 0 0 3230300 2707500 4080100 4292000 3507800 0 7325600 7384400 10969000 7261900 7999500 10200000 22446 1766 20495 188476;188477;188478;188479;188480;188481;188482;188483;188484;188485;188486 150146;150147;150148;150149;150150;150151;150152;150153 150146 8 HYQGTVDK Unmodified 946.45084 0.45084476 1857 P61764 STXBP1 Syntaxin-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 6.4299 3.3664 2 0.0019448 5355 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 153.08 88.868 818460000 115540000 462680000 240240000 0 0 0 0 0 0 0 0 0 0 0 0 22447 1857 20496 188487;188488;188489;188490 150154;150155;150156;150157 150157 3 HYRAIYDTPCIQAESEK Unmodified 2079.9684 0.96838888 130 O00232 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 0 0 1 By MS/MS 2.33 0.471 2 1 3 58.72 51.454 3;4 0.0017001 70561 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.215 45.839 159850000 159850000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22448 130 20497 188491;188492;188493 150158;150159;150160;150161 150161 4 HYSCISELNSK Unmodified 1336.6082 0.60815004 3892 Q96JG6 CCDC132 Coiled-coil domain-containing protein 132 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 37.003 32.051 2 0.0047183 44508 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.148 35.34 32667000 28448000 0 4219100 0 0 0 0 0 0 0 0 0 0 0 0 22449 3892 20498 188494;188495 150162;150163 150162 2 HYSEQFLK Unmodified 1050.5134 0.51344502 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 34.056 34.253 2 0.0045838 36769 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 110.12 73.909 57775000 0 0 0 0 4463700 4283700 5771200 7985900 0 8950900 0 13479000 0 0 12841000 22450 3023 20499 188496;188497;188498;188499;188500;188501;188502 150164;150165;150166;150167;150168;150169 150168 6 HYSPEDEPSPEAQPIAAYK Unmodified 2127.9749 0.97491405 3011 Q6ZSR9 Uncharacterized protein FLJ45252 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 53.367 53.271 3 0.0001505 60304 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 35.202 27.051 20977000 0 0 0 0 4334900 0 8932300 7709800 0 0 0 0 0 0 0 22451 3011 20500 188503;188504;188505 150170;150171;150172 150170 2 HYSPTDYVNWLEEYK Unmodified 1942.8737 0.87374344 608 O94952 FBXO21 F-box only protein 21 yes yes 0 0 0 By MS/MS 3 0 1 1 89.844 86.633 3 0.0047073 103758 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 46.3 41.82 2120100 0 2120100 0 0 0 0 0 0 0 0 0 0 0 0 0 22452 608 20501 188506 150173 150173 1 HYTEAIK Unmodified 860.43922 0.43921744 1313 P31948 STIP1 Stress-induced-phosphoprotein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 2 2 14.256 11.173 2 0.015952 14367 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 138.37 83.842 7055900000 2149100000 2439300000 2467500000 0 0 0 0 0 0 0 0 0 0 0 0 22453 1313 20502 188507;188508;188509;188510;188511 150174;150175;150176;150177;150178 150177 5 HYTFASGSPDNIK Unmodified 1435.6732 0.67319314 349 O43660 PLRG1 Pleiotropic regulator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 16 1 1 2 2 1 2 1 1 1 1 1 2 40.472 40.662 2;3 9.8205E-05 45295 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 85.377 74.854 70550000 0 0 0 8223800 3479900 7658500 7083600 2354100 5576900 4375900 7157500 5564100 4668600 0 14407000 22454 349 20503 188512;188513;188514;188515;188516;188517;188518;188519;188520;188521;188522;188523;188524;188525;188526;188527 150179;150180;150181;150182;150183;150184;150185;150186;150187;150188;150189;150190 150181 11 IAAAGLDVTSPEPLPTNHPLLTLK Unmodified 2467.3686 0.36862527 4852 Q9UBQ7 GRHPR Glyoxylate reductase/hydroxypyruvate reductase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.5 2.93 4 1 1 2 2 1 1 90.214 85.771 3 3.2638E-57 108167 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.56 109.44 431770000 298040000 105390000 17694000 0 0 0 0 0 0 0 0 0 0 0 10639000 22455 4852 20504 188528;188529;188530;188531;188532;188533 150191;150192;150193;150194;150195;150196;150197;150198;150199 150191 9 IAAAILNTPDLRK Unmodified 1394.8245 0.82454882 730 P00505 GOT2 Aspartate aminotransferase, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 64.56 64.941 3 0.00021181 73484 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.79 44.879 20431000 0 0 0 0 0 0 0 0 0 0 4640700 4358500 0 3432300 7999600 22456 730 20505 188534;188535;188536;188537 150200;150201;150202;150203 150200 4 IAAANGIGR Unmodified 841.477 0.47699993 1380 P36871 PGM1 Phosphoglucomutase-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 22.001 22.21 2 1.9207E-05 22107 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 134.44 89.826 173300000 0 0 0 3182000 2980100 3405600 5513200 0 0 0 27933000 22771000 0 28038000 79473000 22457 1380 20506 188538;188539;188540;188541;188542;188543;188544;188545;188546 150204;150205;150206;150207;150208;150209;150210;150211;150212;150213 150207 9 IAADFRNK Unmodified 933.50321 0.50321468 3633 Q92598 HSPH1 Heat shock protein 105 kDa yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 23.566 19.542 2 0.026344 27512 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 138.85 84.062 239100000 210850000 19633000 8614800 0 0 0 0 0 0 0 0 0 0 0 0 22458 3633 20507 188547;188548;188549 150214 150214 0 IAAEIAQAEEQAR Unmodified 1398.7103 0.71030693 3714 Q969G3 SMARCE1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 49.672 49.57 2 0.031628 56481 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 44.847 28.966 22708000 0 0 0 0 9305500 0 7923100 5479000 0 0 0 0 0 0 0 22459 3714 20508 188550;188551;188552;188553 150215;150216;150217 150217 3 IAAEIAQAEEQARK Unmodified 1526.8053 0.80526994 3714 Q969G3 SMARCE1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.29 6 1 24 2 3 2 2 2 2 2 2 2 2 2 2 2 2 2 46.777 45.605 2;3 2.0334E-19 51057 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 101.43 88.294 1421200000 38151000 364910000 309830000 34721000 47955000 50380000 49230000 47054000 38842000 82896000 83320000 67245000 65204000 64054000 77433000 22460 3714 20509 188554;188555;188556;188557;188558;188559;188560;188561;188562;188563;188564;188565;188566;188567;188568;188569;188570;188571;188572;188573;188574;188575;188576;188577;188578;188579;188580;188581;188582;188583;188584 150218;150219;150220;150221;150222;150223;150224;150225;150226;150227;150228;150229;150230;150231;150232;150233;150234;150235;150236;150237;150238;150239;150240;150241 150218 24 IAAENELNQSYK Unmodified 1378.6729 0.67285879 282 O15397 IPO8 Importin-8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.283 40.463 2 4.7553E-20 45323 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 187.64 176.48 178780000 0 0 0 9757500 7462800 22886000 9802900 8535100 8166300 24653000 17634000 14994000 14087000 17617000 23182000 22461 282 20510 188585;188586;188587;188588;188589;188590;188591;188592;188593;188594;188595;188596 150242;150243;150244;150245;150246;150247;150248;150249;150250;150251;150252;150253 150242 12 IAAESSENVDCPENPK Unmodified 1758.773 0.77304312 2661 Q32MZ4 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 2 1 1 1 1 1 1 1 1 1 1 1 30.709 30.898 2 1.6443E-35 33219 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 179.6 169.92 123740000 0 0 0 9172200 5086500 6190800 6597800 9148900 4916300 8666400 13226000 22992000 7907700 11792000 18039000 22462 2661 20511 188597;188598;188599;188600;188601;188602;188603;188604;188605;188606;188607;188608;188609 150254;150255;150256;150257;150258;150259;150260;150261;150262;150263;150264;150265 150263 12 IAAFEEGGK Unmodified 920.46035 0.46034682 2067 Q01970 PLCB3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 yes yes 0 0 0 By MS/MS 10 0 1 1 29.33 29.649 2 0.026405 31065 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 49.833 26.31 2550000 0 0 0 0 0 0 0 0 0 0 0 0 0 2550000 0 22463 2067 20512 188610 150266 150266 1 IAAGEVIQRPANAIK Unmodified 1549.894 0.89402537 1418 P40692 MLH1 DNA mismatch repair protein Mlh1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 50.913 50.998 3 3.6075E-20 58495 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 113.35 92.92 247770000 0 0 0 18309000 14933000 23215000 29017000 27210000 0 0 37171000 0 27809000 27917000 42192000 22464 1418 20513 188611;188612;188613;188614;188615;188616;188617;188618;188619 150267;150268;150269;150270;150271;150272;150273;150274;150275;150276;150277;150278 150278 12 IAAGSSDFLVK Unmodified 1106.5972 0.59717465 535 O75717 WDHD1 WD repeat and HMG-box DNA-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 59.61 58.275 2 0.0012176 65147 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.267 49.344 730560000 12640000 486760000 11452000 15839000 9736200 12194000 13779000 12950000 15735000 17725000 27234000 25561000 17173000 15359000 36415000 22465 535 20514 188620;188621;188622;188623;188624;188625;188626;188627;188628;188629;188630;188631;188632;188633;188634;188635 150279;150280;150281;150282;150283;150284;150285;150286;150287;150288;150289;150290;150291;150292;150293;150294;150295 150283 16 IAAHPNVQK Unmodified 976.54541 0.54541385 1517 P46939 UTRN Utrophin yes yes 0 0 0 By MS/MS 2 0 1 1 14.829 10.78 2 0.028346 16081 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 113.1 85.577 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22466 1517 20515 188636 150296 150296 1 IAAIDSLNQYTR Unmodified 1363.7096 0.70957864 2998 Q6YP21 CCBL2 Kynurenine--oxoglutarate transaminase 3 yes yes 0 0 0 By MS/MS 10 0 1 1 68.197 68.691 2 0.011926 78222 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.201 46.361 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22467 2998 20516 188637 150297 150297 1 IAALNALAACNYLPQSR Unmodified 1844.9567 0.95670198 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 91.561 87.876 2 0.0059061 109414 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 63.624 39.281 175420000 0 173890000 1535300 0 0 0 0 0 0 0 0 0 0 0 0 22468 5189 20517 188638;188639 150298 150298 1 IAALQAFADQLIAAGHYAK Unmodified 1971.0578 0.057796236 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS 3 0 1 1 98.138 94.83 3 0.012942 113706 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 30.107 20.853 3535000 0 3535000 0 0 0 0 0 0 0 0 0 0 0 0 0 22469 2344 20518 188640 150299 150299 1 IAAPELHK Unmodified 877.50215 0.50215205 3653 Q92733 PRCC Proline-rich protein PRCC yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 34.211 29.457 2 0.044132 37385 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 102.71 8.3063 50214000 16084000 21834000 12296000 0 0 0 0 0 0 0 0 0 0 0 0 22470 3653 20519 188641;188642;188643 150300 150300 0 IAAQTLLGTAK Unmodified 1085.6445 0.64445919 2705 Q53H96 PYCRL Pyrroline-5-carboxylate reductase 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 57.553 57.672 2 1.9391E-05 65599 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 126.31 101.46 687560000 0 0 0 29128000 55061000 68597000 74531000 76112000 64523000 63503000 53424000 90638000 35266000 31725000 45051000 22471 2705 20520 188644;188645;188646;188647;188648;188649;188650;188651;188652;188653;188654;188655 150301;150302;150303;150304;150305;150306;150307;150308;150309;150310;150311;150312;150313 150301 13 IAASSSFR Unmodified 837.43447 0.43446642 4074 Q99961 SH3GL1 Endophilin-A2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.376 23.58 2 0.004849 24165 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 145.04 54.059 449240000 0 0 0 21095000 20926000 30246000 24985000 22445000 16765000 51088000 64108000 59759000 46067000 33850000 57902000 22472 4074 20521 188656;188657;188658;188659;188660;188661;188662;188663;188664;188665;188666;188667 150314;150315;150316;150317;150318;150319;150320;150321;150322 150320 7 IAATGVVLDLDK Unmodified 1213.6918 0.69180331 2437 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By matching 10 0 6 1 1 1 1 1 1 75.564 75.629 2 0.027265 87376 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 37.696 9.9543 17287000 0 0 0 0 2261500 0 2199800 2466000 0 4298700 3888500 0 2172500 0 0 22473 2437 20522 188668;188669;188670;188671;188672;188673 150323 150323 1 IAATPAGSR Unmodified 842.46102 0.46101552 4288 Q9C0D5 TANC1 Protein TANC1 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 11.309 11.714 2 0.027353 10077 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.442 18.938 9811500 0 0 0 0 0 0 0 0 0 0 1950200 4076400 0 0 3784900 22474 4288 20523 188674;188675;188676 150324 150324 1 IAAYGHEVGK Unmodified 1043.54 0.53999412 2629 Q16719 KYNU Kynureninase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.25 3.7 3 2 3 2 2 1 1 1 1 26.182 23.648 2 0.0007908 32902 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 114.64 83.335 1641100000 587790000 615040000 398830000 0 0 0 0 0 0 0 7768000 6657100 0 0 25007000 22475 2629 20524 188677;188678;188679;188680;188681;188682;188683;188684 150325;150326;150327;150328;150329;150330;150331;150332 150329 7 IAAYLFK Unmodified 824.47963 0.47962569 2040 Q00610 CLTC Clathrin heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.392 63.485 2 0.023434 71409 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.306 30.77 361330000 0 0 0 15783000 16868000 31172000 20715000 23869000 14335000 33616000 41154000 47400000 26996000 25738000 63685000 22476 2040 20525 188685;188686;188687;188688;188689;188690;188691;188692;188693;188694;188695;188696 150333;150334;150335;150336;150337;150338;150339;150340 150335 8 IAAYLQSDQFCK Unmodified 1442.6864 0.68640036 1120 P21266 GSTM3 Glutathione S-transferase Mu 3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.18 3.74 3 1 7 1 3 1 1 1 1 1 1 1 63.175 60.462 2 8.0469E-23 76844 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 165.83 151.16 1282100000 51134000 1217700000 0 0 3614200 0 3064200 3673100 2915600 0 0 0 0 0 0 22477 1120 20526 188697;188698;188699;188700;188701;188702;188703;188704;188705;188706;188707 150341;150342;150343;150344;150345;150346;150347;150348;150349;150350;150351 150343 11 IACDPEAVEIVGIPDK Unmodified 1724.8655 0.86548694 4904 Q9UHL9 GTF2IRD1 General transcription factor II-I repeat domain-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 82.579 77.874 2 0.043546 96866 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 48.524 42.283 25236000 0 25236000 0 0 0 0 0 0 0 0 0 0 0 0 0 22478 4904 20527 188708 150352 150352 1 IACHEEPVMDLDFDSQK Oxidation (M) 2048.8819 0.88194164 4245 Q9BYB4 GNB1L Guanine nucleotide-binding protein subunit beta-like protein 1 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 64.638 59.306 3 0.0032238 72517 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 42.382 38.662 10527000 0 10527000 0 0 0 0 0 0 0 0 0 0 0 0 0 22479 4245 20528 188709;188710 150353 150353 5714 1 IACLDFSLQK Unmodified 1193.6114 0.6114445 1067 P17987 TCP1 T-complex protein 1 subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching 7.21 3.75 4 1 9 1 3 1 1 1 1 1 1 1 1 1 1 77.025 75.414 2 5.335E-06 94364 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145.16 111.15 519190000 32455000 283510000 8537300 6623500 0 0 5292800 10636000 12392000 0 27182000 33731000 12986000 31248000 54588000 22480 1067 20529 188711;188712;188713;188714;188715;188716;188717;188718;188719;188720;188721;188722;188723;188724 150354;150355;150356;150357;150358;150359;150360;150361;150362;150363 150355 10 IACRSQPDPVDTPTSSKPQSK Unmodified 2298.1274 0.12740872 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 2 By MS/MS 2 0 1 1 30.843 25.124 4 4.4115E-09 35313 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.448 62.645 21233000 21233000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22481 1492 20530 188725 150364 150364 1 IADAIENK Unmodified 872.46035 0.46034682 4674 Q9NVN8 GNL3L Guanine nucleotide-binding protein-like 3-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 14.33 14.312 2 0.036464 19769 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 86.833 35.935 4215200 0 0 0 0 0 0 4215200 0 0 0 0 0 0 0 0 22482 4674 20531 188726;188727;188728;188729 150365;150366;150367;150368 150366 4 IADEDRGNWR Unmodified 1230.5741 0.5741478 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 21.886 22.18 3 0.0027166 23177 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 60.064 46.61 220030000 0 0 0 0 0 17625000 14390000 14363000 15270000 24012000 21712000 28949000 23640000 28460000 31608000 22483 2378 20532 188730;188731;188732;188733;188734;188735;188736;188737;188738;188739 150369;150370;150371;150372;150373 150370 4 IADELGNR Unmodified 886.45084 0.45084476 3283 Q8IYH5 ZZZ3 ZZ-type zinc finger-containing protein 3 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 23.297 23.479 2 0.016731 25070 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 66.799 25.297 80774000 0 0 0 0 11799000 8111000 7943000 0 3565300 14051000 17105000 0 10187000 0 8013300 22484 3283 20533 188740;188741;188742;188743;188744;188745;188746;188747 150374;150375;150376 150376 3 IADELGNRTAK Unmodified 1186.6306 0.63060004 3283 Q8IYH5 ZZZ3 ZZ-type zinc finger-containing protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 23.948 19.924 3 0.030566 25354 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 57.174 31.832 66758000 38795000 9172100 18791000 0 0 0 0 0 0 0 0 0 0 0 0 22485 3283 20534 188748;188749;188750 150377 150377 0 IADFGLCK Unmodified 922.45824 0.45823833 2604;2603;2938 Q6P5Z2;Q16512;Q16513 PKN3;PKN1;PKN2 Serine/threonine-protein kinase N3;Serine/threonine-protein kinase N1;Serine/threonine-protein kinase N2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 53.409 53.501 2 0.013906 60228 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 71.342 36.518 406330000 0 0 0 23453000 25028000 41711000 35726000 30468000 31704000 38816000 49275000 0 47858000 35689000 46604000 22486 2938;2603;2604 20535 188751;188752;188753;188754;188755;188756;188757;188758;188759;188760;188761 150378;150379;150380;150381;150382;150383;150384;150385;150386;150387 150383 10 IADFGLSK Unmodified 849.45962 0.45961853 320 O43353;Q16566 RIPK2;CAMK4 Receptor-interacting serine/threonine-protein kinase 2;Calcium/calmodulin-dependent protein kinase type IV yes no 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 55.199 50.339 2 0.03306 65234 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.665 26.898 106000000 0 100390000 5611500 0 0 0 0 0 0 0 0 0 0 0 0 22487 320 20536 188762;188763 150388;150389 150388 2 IADFGLSNMMSDGEFLR 2 Oxidation (M) 1933.855 0.85499861 2238 Q13131;P54646 PRKAA1;PRKAA2 5'-AMP-activated protein kinase catalytic subunit alpha-1;5'-AMP-activated protein kinase catalytic subunit alpha-2 yes no 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 80.993 81.096 2 1.4398E-14 93484 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.745 82.587 69010000 0 0 0 0 2610700 7724900 3282700 5535400 5062300 8101300 9532000 6871500 5595100 4576700 10117000 22488 2238 20537 188764;188765;188766;188767;188768;188769;188770;188771;188772;188773;188774 150390;150391;150392;150393;150394;150395;150396;150397;150398;150399;150400 150393 3638;3639 11 IADFGVSNEFK Unmodified 1225.5979 0.59790293 3973 Q96RR4 CAMKK2 Calcium/calmodulin-dependent protein kinase kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 68.943 68.894 2 0.014976 79111 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 45.022 6.9359 11194000 0 0 0 2012100 0 2540200 0 0 0 2373500 0 0 2322800 1945100 0 22489 3973 20538 188775;188776;188777;188778;188779 150401 150401 1 IADFGWSVHAPSLR Unmodified 1554.7943 0.79431133 3853 Q96GD4 AURKB Aurora kinase B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 48.901 48.959 2 0.0015064 55398 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 57.785 23.863 148360000 0 0 0 5853400 11426000 0 20101000 0 10810000 19359000 35353000 45457000 0 0 0 22490 3853 20539 188780;188781;188782;188783;188784;188785;188786 150402;150403;150404;150405;150406 150403 5 IADFLNSFDMSCR Oxidation (M) 1590.6807 0.68066306 3552 Q8WUW1 BRK1 Protein BRICK1 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 81.864 81.897 2 0.00069449 94493 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.719 55.196 14443000 0 0 0 1744000 0 2258400 0 0 0 0 3855100 0 1752200 1289500 3543400 22491 3552 20540 188787;188788;188789;188790;188791;188792 150407;150408;150409 150407 5048 3 IADFQDVLK Unmodified 1047.5601 0.56006086 4667 Q9NVG8 TBC1D13 TBC1 domain family member 13 yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 73.35 73.396 2 0.03116 83985 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.869 23.093 21699000 0 0 0 3738000 0 0 2373400 0 0 0 0 0 2998700 4014900 8574000 22492 4667 20541 188793;188794;188795;188796;188797 150410 150410 1 IADGYEQAAR Unmodified 1092.52 0.51998696 1548 P48643 CCT5 T-complex protein 1 subunit epsilon yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 1 2 1 2 1 2 1 2 1 2 2 22.625 22.868 2 4.5584E-12 25467 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 163.99 125.19 1564300000 0 0 0 73198000 62232000 129590000 92712000 91579000 53081000 129550000 178860000 171510000 123780000 148600000 309570000 22493 1548 20542 188798;188799;188800;188801;188802;188803;188804;188805;188806;188807;188808;188809;188810;188811;188812;188813;188814;188815 150411;150412;150413;150414;150415;150416;150417;150418;150419 150419 6 IADLCHTFIK Unmodified 1216.6274 0.62742892 2395 Q14232 EIF2B1 Translation initiation factor eIF-2B subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 69.083 63.12 3 0.001484 81199 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.298 41.14 91081000 56107000 19244000 15730000 0 0 0 0 0 0 0 0 0 0 0 0 22494 2395 20543 188816;188817;188818 150420;150421;150422 150420 3 IADLGLASFK Unmodified 1033.5808 0.5807963 2313 Q13546 RIPK1 Receptor-interacting serine/threonine-protein kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 77.11 76.398 2 0.002199 91605 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 107.15 68.362 515700000 263250 197630000 42304000 0 0 30628000 0 25932000 19272000 36112000 30330000 28833000 24599000 25436000 54365000 22495 2313 20544 188819;188820;188821;188822;188823;188824;188825;188826;188827;188828;188829;188830;188831 150423;150424;150425;150426;150427;150428;150429;150430;150431;150432;150433;150434 150428 3 IADMGHLK Unmodified 883.45857 0.45857268 959 P12004 PCNA Proliferating cell nuclear antigen yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.83 3.76 3 2 7 2 2 1 1 1 1 1 1 1 1 26.504 24.829 2 0.0050554 34032 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.93 96.387 4665600000 2974400000 742250000 700030000 10871000 0 0 0 0 0 12478000 21848000 47175000 10138000 18485000 127920000 22496 959 20545 188832;188833;188834;188835;188836;188837;188838;188839;188840;188841;188842;188843 150435;150436;150437;150438;150439;150440;150441;150442;150443;150444 150436 8 IADMGHLK Oxidation (M) 899.45349 0.4534873 959 P12004 PCNA Proliferating cell nuclear antigen yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.2 3.53 1 8 2 4 4 4 3 2 1 1 15.907 12.397 2 0.0043924 12267 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 117.93 64.38 2706600000 652720000 677610000 1332100000 0 0 0 0 0 0 0 19157000 9696900 0 0 15330000 22497 959 20545 188844;188845;188846;188847;188848;188849;188850;188851;188852;188853;188854;188855;188856;188857;188858 150445;150446;150447;150448;150449;150450;150451;150452;150453;150454 150452 1252 10 IADPTLAEMGK Unmodified 1144.5798 0.57981002 2940 Q6P996;Q6P474 PDXDC1;PDXDC2P Pyridoxal-dependent decarboxylase domain-containing protein 1;Putative pyridoxal-dependent decarboxylase domain-containing protein 2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 53.475 53.235 2 0.00011949 58886 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 130.66 109.21 526070000 0 3580000 0 35832000 20785000 34683000 33236000 36931000 44148000 66817000 46191000 45732000 46639000 52690000 58801000 22498 2940 20546 188859;188860;188861;188862;188863;188864;188865;188866;188867;188868;188869;188870;188871 150455;150456;150457;150458;150459;150460;150461;150462;150463;150464;150465;150466;150467;150468;150469;150470;150471;150472;150473;150474;150475;150476;150477 150461 23 IADPTLAEMGK Oxidation (M) 1160.5747 0.57472465 2940 Q6P996;Q6P474 PDXDC1;PDXDC2P Pyridoxal-dependent decarboxylase domain-containing protein 1;Putative pyridoxal-dependent decarboxylase domain-containing protein 2 yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 36.818 35.639 2 0.0002178 40079 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 96.143 66.994 361250000 5691700 119450000 2543200 17230000 13404000 0 19226000 17599000 15909000 28240000 26514000 25629000 28533000 20148000 21138000 22499 2940 20546 188872;188873;188874;188875;188876;188877;188878;188879;188880;188881;188882;188883;188884;188885;188886 150478;150479;150480;150481;150482;150483;150484;150485;150486;150487;150488;150489;150490;150491;150492;150493 150480 4575 14 IADQFLGAMYTLPR Oxidation (M) 1610.8127 0.81266351 397 O60341 KDM1A Lysine-specific histone demethylase 1A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.579 81.64 2 6.2563E-13 93708 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 107.97 83.128 220700000 0 0 0 4427200 10801000 20477000 10876000 18504000 12025000 30014000 23259000 27606000 14513000 15080000 33115000 22500 397 20547 188887;188888;188889;188890;188891;188892;188893;188894;188895;188896;188897;188898 150494;150495;150496;150497;150498;150499;150500;150501;150502;150503;150504;150505;150506;150507;150508 150504 499 15 IADQFLGAMYTLPR Unmodified 1594.8177 0.81774888 397 O60341 KDM1A Lysine-specific histone demethylase 1A yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 88.571 88.706 2 0.0004207 102639 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.289 74.745 14689000 0 0 0 0 0 0 0 2402500 0 3402500 0 0 872350 0 8011700 22501 397 20547 188899;188900;188901;188902 150509;150510;150511 150510 3 IADQLEELNK Unmodified 1171.6085 0.60846762 4070 Q99933 BAG1 BAG family molecular chaperone regulator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 51.917 50.264 2 9.8946E-09 66358 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 157.96 126.09 1980500000 23414000 1664800000 4039900 22939000 13954000 0 26038000 21709000 0 28260000 40207000 43959000 0 26095000 65109000 22502 4070 20548 188903;188904;188905;188906;188907;188908;188909;188910;188911;188912;188913;188914;188915;188916;188917;188918 150512;150513;150514;150515;150516;150517;150518;150519;150520;150521;150522;150523;150524;150525;150526;150527 150519 16 IADREDEYK Unmodified 1137.5302 0.53021729 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 12.183 11.823 2 0.030056 15043 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.62 47.091 180080000 0 57586000 0 3417200 4178600 9189600 5773100 8139600 9836100 10630000 8458100 18271000 11984000 15016000 17600000 22503 516 20549 188919;188920;188921;188922;188923;188924;188925;188926;188927;188928;188929;188930;188931;188932 150528;150529;150530 150528 0 IADREDEYKK Unmodified 1265.6252 0.62518031 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 2 1 1 1 1 1 2 1 1 1 1 7.771 7.9079 3 0.036797 6432 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 65.5 38.828 667910000 0 0 0 19939000 20990000 0 33987000 34081000 28650000 52094000 158090000 115510000 65870000 71689000 67003000 22504 516 20550 188933;188934;188935;188936;188937;188938;188939;188940;188941;188942;188943;188944;188945 150531;150532;150533 150533 0 IADRGAEYVSAR Unmodified 1306.663 0.6629628 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 26.366 26.571 3 0.00033849 27311 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 67.115 48.491 166690000 0 0 0 4935600 8243700 14688000 8949900 10954000 0 13964000 16754000 24655000 25756000 18069000 19722000 22505 516 20551 188946;188947;188948;188949;188950;188951;188952;188953;188954;188955;188956 150534;150535;150536;150537;150538;150539;150540;150541;150542;150543;150544;150545 150540 12 IADRLGLELGK Unmodified 1183.6925 0.69247202 1818 P60891 PRPS1 Ribose-phosphate pyrophosphokinase 1 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 4 1 1 1 1 1 1 1 1 1 1 1 1 1 62.88 60.855 2;3 1.081E-05 80919 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.38 59.88 575850000 272980000 81161000 0 7131700 7914000 21538000 17253000 16111000 13301000 20678000 22815000 19015000 17125000 21074000 37755000 22506 1818 20552 188957;188958;188959;188960;188961;188962;188963;188964;188965;188966;188967;188968;188969;188970;188971;188972;188973 150546;150547;150548;150549;150550;150551;150552;150553;150554;150555;150556;150557;150558;150559;150560;150561;150562;150563 150550 14 IADSCALTSGK Unmodified 1121.5387 0.53867349 4793 Q9P0K8 FOXJ2 Forkhead box protein J2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.082 27.235 2 0.00029439 29152 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 103.26 74.085 147340000 0 0 0 12526000 9474300 11392000 12261000 15249000 8842200 14805000 18303000 0 14258000 13998000 16235000 22507 4793 20553 188974;188975;188976;188977;188978;188979;188980;188981;188982;188983;188984;188985 150564;150565;150566;150567;150568;150569;150570;150571;150572;150573;150574;150575 150573 11 IADSIGNNR Unmodified 958.48321 0.48320752 3460 Q8NHV4 NEDD1 Protein NEDD1 yes yes 0 0 0 By MS/MS 10 0 1 1 18.326 18.631 2 0.04269 18936 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 43.858 20.09 4071700 0 0 0 0 0 0 0 0 0 0 0 0 4071700 0 0 22508 3460 20554 188986 150576 150576 1 IADSIGNNRQNAPLTSIQIR Unmodified 2180.1662 0.16617749 3460 Q8NHV4 NEDD1 Protein NEDD1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 69.596 69.854 3 0.013199 79979 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 27.324 16.95 9792500 0 0 0 0 0 0 1934400 0 3214400 0 0 0 0 0 4643600 22509 3460 20555 188987;188988;188989 150577;150578 150578 2 IADSVNLPLDVVK Unmodified 1381.7817 0.78168095 1389 P37275 ZEB1 Zinc finger E-box-binding homeobox 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 82.818 82.463 2 0.0007465 95120 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.153 47.064 185530000 0 112120000 0 2400300 4368000 6197000 3562900 5233700 0 6219000 8706700 8006200 9344100 7246600 12132000 22510 1389 20556 188990;188991;188992;188993;188994;188995;188996;188997;188998;188999;189000;189001 150579;150580;150581;150582;150583;150584;150585;150586;150587;150588 150583 10 IADTSNMLLFIPGCK Oxidation (M) 1694.8372 0.8371637 4183 Q9BVC3 DSCC1 Sister chromatid cohesion protein DCC1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 81.92 82.005 2 5.354E-10 94954 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 94.363 79.39 52741000 0 0 0 0 2287500 4841900 4137300 0 0 6258800 7040500 8246200 4628400 5341800 9958900 22511 4183 20557 189002;189003;189004;189005;189006;189007;189008;189009;189010 150589;150590;150591;150592;150593;150594;150595 150592 5668 7 IADTSNMLLFIPGCK Unmodified 1678.8422 0.84224908 4183 Q9BVC3 DSCC1 Sister chromatid cohesion protein DCC1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 89.255 89.36 2 0.039468 103469 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 29.534 23.15 10352000 0 0 0 0 0 1843400 0 0 0 0 0 2302400 0 1944500 4262100 22512 4183 20557 189011;189012;189013;189014 150596 150596 1 IADVVLLQK Unmodified 997.61718 0.61718181 2416 Q14573 ITPR3 Inositol 1,4,5-trisphosphate receptor type 3 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 65.195 65.371 2 0.0043077 74651 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 87.251 65.976 14459000 0 0 0 0 0 2110200 2269000 2073500 0 2885600 0 3583700 0 1537400 0 22513 2416 20558 189015;189016;189017;189018;189019;189020 150597;150598;150599 150599 3 IAEAEIENLTGAR Unmodified 1385.7151 0.71505795 3359 Q8N6M0 OTUD6B OTU domain-containing protein 6B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 67.672 67.822 2 3.3735E-08 77704 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 106.29 49.728 66438000 0 0 0 0 2595900 5874300 0 0 3867300 0 10565000 9484700 9279100 9396100 15376000 22514 3359 20559 189021;189022;189023;189024;189025;189026;189027;189028;189029;189030 150600;150601;150602;150603;150604;150605;150606;150607 150604 8 IAEAGSRMDK Oxidation (M) 1092.5234 0.52335778 1340;1200 P35221;P26232 CTNNA1;CTNNA2 Catenin alpha-1;Catenin alpha-2 no no 0 1 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 6.1476 3.0879 2 0.00058503 5171 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 132.39 98.995 230770000 35120000 88967000 106680000 0 0 0 0 0 0 0 0 0 0 0 0 22515 1340;1200 20560 189031;189032;189033;189034 150608;150609;150610 150610 1748 2 IAEAVPGR Unmodified 811.4552 0.45520186 4021 Q99543 DNAJC2 DnaJ homolog subfamily C member 2;DnaJ homolog subfamily C member 2, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 23.876 24.131 2 0.01982 25194 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 63.306 24.088 40526000 0 0 0 2351600 0 2114300 2453300 0 2194200 4071500 1143100 8314200 5580400 0 12304000 22516 4021 20561 189035;189036;189037;189038;189039;189040;189041;189042;189043 150611 150611 1 IAEAYQMLK Oxidation (M) 1081.5478 0.54778161 4950 Q9UJY5 GGA1 ADP-ribosylation factor-binding protein GGA1 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 41.479 37.127 2 0.0043617 48334 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.17 81.61 66235000 0 62083000 4152700 0 0 0 0 0 0 0 0 0 0 0 0 22517 4950 20562 189044;189045 150612 150612 6293 1 IAECLQTISDLETECLDLRTK Unmodified 2507.2247 0.2247395 2849 Q676U5 ATG16L1 Autophagy-related protein 16-1 yes yes 0 0 1 By MS/MS By matching 2 0 2 1 1 90.116 86.439 3 1.6504E-07 107555 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.027 69.932 20608000 0 19113000 1495600 0 0 0 0 0 0 0 0 0 0 0 0 22518 2849 20563 189046;189047 150613 150613 0 IAECSSQLAEEEEK Unmodified 1621.7141 0.71413125 1357 P35580 MYH10 Myosin-10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 35.057 35.131 2 3.4464E-16 38272 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 118.48 111.51 29941000 0 0 0 6391000 3300400 0 3262700 2958600 0 5163600 0 5774100 0 3090400 0 22519 1357 20564 189048;189049;189050;189051;189052;189053;189054;189055 150614;150615;150616;150617;150618;150619;150620 150618 7 IAEELGTSR Unmodified 974.50327 0.50327426 2763 Q5SXM2 SNAPC4 snRNA-activating protein complex subunit 4 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 26.179 26.319 2 0.031872 28129 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 47.574 17.071 36912000 0 0 0 0 6087600 4788900 5011400 0 4366300 4832700 0 5133400 6691900 0 0 22520 2763 20565 189056;189057;189058;189059;189060;189061;189062 150621;150622 150622 2 IAEENGAAFAGGTSLIQK Unmodified 1775.9054 0.90537792 4247 Q9BYD6 MRPL1 39S ribosomal protein L1, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 74.219 69.063 2 0.0079216 86808 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 45.992 29.361 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22521 4247 20566 189063 150623 150623 1 IAEENIMK Oxidation (M) 962.47428 0.47428232 2403 Q14320 FAM50A Protein FAM50A yes yes 0 1 0 By matching By MS/MS By matching By matching By MS/MS By matching 10 0 6 1 1 1 1 1 1 19.508 19.669 2 0.038323 20447 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 82.716 59.141 40770000 0 0 0 0 6429800 10107000 0 6325100 0 10897000 0 0 0 5344900 1666400 22522 2403 20567 189064;189065;189066;189067;189068;189069 150624;150625 150624 1 IAEENIMK Unmodified 946.47937 0.4793677 2403 Q14320 FAM50A Protein FAM50A yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 34.936 35.031 2 0.006785 38499 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 97.033 59.939 80810000 0 0 0 6847500 0 10250000 9533700 0 10165000 13101000 19406000 0 0 11507000 0 22523 2403 20567 189070;189071;189072;189073;189074;189075;189076 150626;150627;150628;150629;150630;150631 150626 6 IAEESNFPFIK Unmodified 1293.6605 0.66050319 1504 P46459 NSF Vesicle-fusing ATPase yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 79.255 78.686 2 0.0040546 90496 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.985 47.471 102370000 0 62153000 1577700 0 2811900 0 3424800 3465500 0 3916400 4770700 4306700 5193900 4023100 6723400 22524 1504 20568 189077;189078;189079;189080;189081;189082;189083;189084;189085;189086;189087 150632;150633;150634;150635 150633 4 IAEETAVAQRPGGATR Unmodified 1625.8485 0.84853174 3665 Q92805 GOLGA1 Golgin subfamily A member 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.947 28.143 3 3.9714E-06 29973 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 79.81 70.053 148470000 0 0 0 9150000 8690500 14197000 9989200 10434000 9645500 12735000 14809000 22592000 13298000 10059000 12867000 22525 3665 20569 189088;189089;189090;189091;189092;189093;189094;189095;189096;189097;189098;189099 150636;150637;150638;150639;150640;150641;150642;150643;150644;150645;150646 150641 11 IAEFSRTPEDFLK Unmodified 1551.7933 0.79330827 4126 Q9BSJ2 TUBGCP2 Gamma-tubulin complex component 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 79.601 74.423 3 0.0013414 95447 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.548 58.715 79598000 39461000 26427000 13710000 0 0 0 0 0 0 0 0 0 0 0 0 22526 4126 20570 189100;189101;189102 150647;150648;150649 150648 3 IAEFTTNLTEEEEK Unmodified 1652.7781 0.77811172 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 40 4 4 3 4 4 4 3 3 2 3 2 4 70.484 70.555 2;3 0 73356 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 261.75 237.46 7418300000 0 0 0 370040000 527420000 837040000 486500000 427070000 418260000 691780000 734660000 1062700000 689670000 471110000 702050000 22527 1356 20571 189103;189104;189105;189106;189107;189108;189109;189110;189111;189112;189113;189114;189115;189116;189117;189118;189119;189120;189121;189122;189123;189124;189125;189126;189127;189128;189129;189130;189131;189132;189133;189134;189135;189136;189137;189138;189139;189140;189141;189142 150650;150651;150652;150653;150654;150655;150656;150657;150658;150659;150660;150661;150662;150663;150664;150665;150666;150667;150668;150669;150670;150671;150672 150668 22 IAEGAQQGDPLSR Unmodified 1340.6684 0.66844211 4934 Q9UJ70 NAGK N-acetyl-D-glucosamine kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 35.078 35.326 2 0.00074523 39435 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 71.176 61.488 34666000 0 0 0 10691000 0 0 0 5714400 0 0 5166100 0 3676800 0 9417600 22528 4934 20572 189143;189144;189145;189146;189147;189148 150673;150674;150675;150676 150676 4 IAEGFSESK Unmodified 966.46583 0.46582612 5225 Q9Y597 KCTD3 BTB/POZ domain-containing protein KCTD3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 25.117 25.337 2 0.0078297 27380 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 71.379 54.453 69316000 0 0 0 0 5379900 8276600 6307900 0 5046100 8140900 0 8306700 7231200 6936400 13690000 22529 5225 20573 189149;189150;189151;189152;189153;189154;189155;189156;189157 150677;150678;150679;150680;150681;150682;150683 150683 7 IAEHIAGR Unmodified 865.477 0.47699993 3974 Q96RS0 TGS1 Trimethylguanosine synthase yes yes 0 0 0 By MS/MS By matching By matching By MS/MS 10 0 4 1 1 1 1 14.541 14.733 2 0.045385 14278 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 48.561 21.441 14195000 0 0 0 0 0 6145000 0 0 0 2622500 0 2273700 3153800 0 0 22530 3974 20574 189158;189159;189160;189161 150684 150684 1 IAEIEAEMAR Unmodified 1131.5594 0.55940893 5092 Q9Y295 DRG1 Developmentally-regulated GTP-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 51.149 51.31 2 0.03441 57861 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 41.796 20.521 9387900 0 0 0 0 0 0 0 0 0 9387900 0 0 0 0 0 22531 5092 20575 189162;189163 150685;150686 150686 2 IAEIEAEMAR Oxidation (M) 1147.5543 0.55432356 5092 Q9Y295 DRG1 Developmentally-regulated GTP-binding protein 1 yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 33.529 33.851 2 0.043662 37220 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 56.916 31.022 12741000 0 0 0 0 0 0 0 0 0 0 0 0 7596800 5143700 0 22532 5092 20575 189164;189165 150687 150687 0 IAEIEAEMARTQK Oxidation (M) 1504.7555 0.75554256 5092 Q9Y295 DRG1 Developmentally-regulated GTP-binding protein 1 yes yes 0 1 1 By MS/MS 3 0 1 1 33.384 28.872 3 0.02677 36110 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 50.897 36.335 9914200 0 9914200 0 0 0 0 0 0 0 0 0 0 0 0 0 22533 5092 20576 189166 150688 150688 0 IAEIEAEMARTQK Unmodified 1488.7606 0.76062794 5092 Q9Y295 DRG1 Developmentally-regulated GTP-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.33 0.471 2 1 1 1 1 53.197 47.542 3 0.002364 59577 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 67.118 41.227 38780000 6856100 5302800 26621000 0 0 0 0 0 0 0 0 0 0 0 0 22534 5092 20576 189167;189168;189169 150689;150690;150691 150691 2 IAELCANSIK Unmodified 1117.5801 0.58014438 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 3 9 1 1 1 1 1 1 1 1 1 1 1 1 47.704 46.29 2 1.7503E-11 52735 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 161.92 87.788 816170000 9651800 162690000 2358200 270660000 43263000 45112000 47691000 53159000 36643000 0 64774000 0 0 38669000 41493000 22535 1029 20577 189170;189171;189172;189173;189174;189175;189176;189177;189178;189179;189180;189181 150692;150693;150694;150695;150696;150697;150698;150699;150700;150701;150702;150703 150692 12 IAELCDDPK Unmodified 1059.4907 0.49066067 1073 P18206 VCL Vinculin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.33 2 2 11 2 2 1 1 1 1 1 1 1 1 1 1 1 32.343 30.427 2 0.0052698 33920 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 78.334 48.996 1905900000 10795000 1646400000 0 24492000 0 44748000 20450000 0 0 0 42646000 34262000 0 0 82114000 22536 1073 20578 189182;189183;189184;189185;189186;189187;189188;189189;189190;189191;189192;189193;189194;189195;189196 150704;150705;150706;150707;150708;150709;150710;150711;150712;150713;150714;150715;150716 150704 12 IAELERQVK Unmodified 1084.6241 0.6240581 3217 Q8IUD2 ERC1 ELKS/Rab6-interacting/CAST family member 1 yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 30.295 26.497 2 0.036233 33266 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 106.42 56.297 31853000 0 7980100 23873000 0 0 0 0 0 0 0 0 0 0 0 0 22537 3217 20579 189197;189198 150717;150718 150718 2 IAELESK Unmodified 788.42798 0.42798405 2698 Q53EZ4 CEP55 Centrosomal protein of 55 kDa yes yes 0 0 0 By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 13 2 1 1 1 1 1 1 1 1 2 1 18.864 19.011 2 0.023413 17925 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 86.472 14.758 103690000 0 0 0 8135400 4889100 6817500 7216500 6593500 5727300 8733500 9533300 0 10078000 24699000 11264000 22538 2698 20580 189199;189200;189201;189202;189203;189204;189205;189206;189207;189208;189209;189210;189211 150719;150720;150721 150721 3 IAELLSPGSVDPLTR Unmodified 1566.8617 0.86172219 1344 P35237 SERPINB6 Serpin B6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 83.383 83.447 2 4.651E-35 96135 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 186.81 160.14 620050000 0 0 0 7770700 14025000 17692000 16932000 23130000 18877000 42142000 86446000 67645000 24517000 62646000 238230000 22539 1344 20581 189212;189213;189214;189215;189216;189217;189218;189219;189220;189221;189222;189223 150722;150723;150724;150725;150726;150727;150728;150729;150730;150731;150732;150733;150734 150726 13 IAELMPGASGAEVK Oxidation (M) 1387.7017 0.70171607 1876 P62195 PSMC5 26S protease regulatory subunit 8 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 46.807 45.325 2 1.2892E-23 57376 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.74 102.49 750870000 10500000 439560000 6280800 17043000 23564000 28485000 9004500 0 0 44418000 54357000 76920000 11268000 12008000 17461000 22540 1876 20582 189224;189225;189226;189227;189228;189229;189230;189231;189232;189233;189234;189235;189236;189237 150735;150736;150737;150738;150739;150740;150741;150742;150743;150744;150745;150746;150747 150739 3041 11 IAELMPGASGAEVK Unmodified 1371.7068 0.70680145 1876 P62195 PSMC5 26S protease regulatory subunit 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 60.303 59.429 2 2.4855E-05 66882 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.001 72.334 2180200000 0 1676500000 9031800 29601000 49023000 33774000 18150000 19831000 10161000 69444000 86482000 97148000 12400000 15227000 53380000 22541 1876 20582 189238;189239;189240;189241;189242;189243;189244;189245;189246;189247;189248;189249;189250;189251;189252 150748;150749;150750;150751;150752;150753;150754;150755;150756;150757;150758;150759;150760;150761;150762 150752 15 IAELSEDDQK Unmodified 1146.5404 0.54044763 4263 Q9BZE4 GTPBP4 Nucleolar GTP-binding protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 24.434 24.646 2 0.0041806 25657 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 84.213 67.436 67517000 0 0 0 3365800 4903100 3225200 6323600 0 0 6183600 7120600 10362000 9552400 6813500 9666500 22542 4263 20583 189253;189254;189255;189256;189257;189258;189259;189260;189261;189262 150763;150764;150765;150766;150767;150768 150767 6 IAEMEYSGANSIFLR Oxidation (M) 1715.8189 0.8188711 2354 Q13895 BYSL Bystin yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 75.709 75.583 2 0.00045584 87128 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 62.466 38.123 10360000 0 0 0 1418200 2517600 0 2050400 0 0 0 4374300 0 0 0 0 22543 2354 20584 189263;189264;189265;189266 150769;150770;150771 150769 3840 3 IAENGVSERDSEAAK Unmodified 1574.7536 0.7536283 4469 Q9H9B1 EHMT1 Histone-lysine N-methyltransferase EHMT1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 15.631 15.823 3 0.00010053 14490 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.3 36.099 116360000 0 0 0 0 4780300 0 7952300 0 6583000 10882000 0 28019000 16243000 17939000 23959000 22544 4469 20585 189267;189268;189269;189270;189271;189272;189273;189274;189275;189276;189277 150772;150773;150774;150775;150776;150777;150778;150779;150780;150781;150782;150783 150774 12 IAENNDLLWMDYHQK Unmodified 1888.8778 0.87778296 162 O00499 BIN1 Myc box-dependent-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 79.945 74.788 3 0.00018466 91647 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 60.55 50.892 65076000 10079000 47133000 7863700 0 0 0 0 0 0 0 0 0 0 0 0 22545 162 20586 189278;189279;189280 150784;150785;150786 150786 3 IAENPANPPVGGK Unmodified 1262.6619 0.66190017 2840;5195 Q641Q2;Q5SRD0;Q9Y4E1 FAM21A;FAM21D;FAM21C WASH complex subunit FAM21A;Putative WASH complex subunit FAM21;WASH complex subunit FAM21C no no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 32.086 31.379 2 9.6744E-07 34750 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 93.556 54.78 127930000 4024400 23778000 0 6074800 6436300 10414000 7436600 6308300 6906900 7826900 10742000 13725000 0 8934400 15322000 22546 2840;5195 20587 189281;189282;189283;189284;189285;189286;189287;189288;189289;189290;189291;189292;189293 150787;150788;150789;150790;150791;150792;150793;150794;150795;150796;150797;150798;150799 150787 12 IAEQEHTQEDLQQLR Unmodified 1836.8966 0.89660415 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 41.738 42.197 3 0.043541 46995 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 25.957 18.247 12014000 0 0 0 0 0 0 0 0 0 5974300 0 6039300 0 0 0 22547 5049 20588 189294;189295 150800 150800 1 IAEQLGDGDEVIEK Unmodified 1514.7464 0.74641766 3673 Q92871 PMM1 Phosphomannomutase 1 yes yes 0 0 0 By MS/MS 2 0 1 1 57.98 52.149 2 2.6875E-29 67096 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 160.15 142.71 31134000 0 31134000 0 0 0 0 0 0 0 0 0 0 0 0 0 22548 3673 20589 189296 150801 150801 1 IAEQVASFQEEK Unmodified 1377.6776 0.67760981 1340 P35221 CTNNA1 Catenin alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 47.521 46.236 2 2.326E-14 60945 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 172.56 143.5 1862200000 19296000 856030000 7660200 62752000 55227000 82986000 74129000 71073000 52275000 92648000 106400000 99133000 86641000 59076000 136900000 22549 1340 20590 189297;189298;189299;189300;189301;189302;189303;189304;189305;189306;189307;189308;189309;189310;189311;189312 150802;150803;150804;150805;150806;150807;150808;150809;150810;150811;150812;150813;150814;150815;150816;150817;150818;150819;150820;150821 150811 20 IAESIPYLK Unmodified 1032.5855 0.58554733 2191 Q12797 ASPH Aspartyl/asparaginyl beta-hydroxylase yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 68.807 69.067 2 0.033064 79199 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 47.082 14.94 10785000 0 0 0 0 0 0 0 0 0 0 0 5977900 4806700 0 0 22550 2191 20591 189313;189314 150822 150822 1 IAESNHIK Unmodified 910.48723 0.48723027 356 O43707 ACTN4 Alpha-actinin-4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.52 3.05 3 1 17 1 2 1 1 1 1 2 1 1 2 2 1 2 1 2 7.7557 7.2747 2 0.0050366 5282 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 114.78 45.351 535160000 30595000 55769000 73101000 14230000 8885600 23897000 13226000 12580000 8331200 21063000 92032000 34221000 22948000 35161000 89125000 22551 356 20592 189315;189316;189317;189318;189319;189320;189321;189322;189323;189324;189325;189326;189327;189328;189329;189330;189331;189332;189333;189334;189335 150823;150824;150825;150826;150827;150828;150829;150830;150831;150832;150833;150834;150835;150836;150837;150838 150823 16 IAESTEWQEK Unmodified 1219.5721 0.57208211 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 33.559 33.352 2 0.0049775 36408 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 84.615 49.257 96681000 0 30274000 0 3543700 3437000 4676200 3131300 4154600 3919300 4842500 9441400 9232500 7186700 4889600 7952300 22552 2446 20593 189336;189337;189338;189339;189340;189341;189342;189343;189344;189345;189346;189347;189348 150839;150840;150841;150842;150843;150844;150845;150846;150847;150848;150849 150843 11 IAETDFEK Unmodified 951.45493 0.45492709 4035 Q99615 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 33.327 32.267 2 0.0044102 35957 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 112.17 67.724 1771500000 36788000 1008500000 5668300 37860000 37845000 55563000 56812000 44158000 40944000 70211000 63100000 74448000 67198000 64125000 108250000 22553 4035 20594 189349;189350;189351;189352;189353;189354;189355;189356;189357;189358;189359;189360;189361;189362;189363;189364 150850;150851;150852;150853;150854;150855;150856;150857;150858;150859;150860;150861;150862;150863;150864;150865 150850 16 IAETFGLQENYIK Unmodified 1524.7824 0.78240924 5226 Q9Y5A7 NUB1 NEDD8 ultimate buster 1 yes yes 0 0 0 By MS/MS 2 0 1 1 80.241 75.529 2 2.1621E-06 94109 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.53 80.785 156820000 0 156820000 0 0 0 0 0 0 0 0 0 0 0 0 0 22554 5226 20595 189365 150866 150866 0 IAEVDCTAER Unmodified 1162.5288 0.52883709 3402 Q8NBS9 TXNDC5 Thioredoxin domain-containing protein 5 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 23.356 23.734 2 0.0024592 23615 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 82.749 42.682 42699000 0 0 0 0 0 3058300 0 0 1729300 0 5818900 7335800 4358100 5994100 14405000 22555 3402 20596 189366;189367;189368;189369;189370;189371;189372 150867;150868;150869;150870;150871;150872 150870 6 IAEVDCTAERNICSK Unmodified 1764.8135 0.81346814 3402 Q8NBS9 TXNDC5 Thioredoxin domain-containing protein 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 2 3 1 41.987 36.633 2;3 1.2827E-72 47927 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 199.8 186.79 576880000 34299000 529580000 13001000 0 0 0 0 0 0 0 0 0 0 0 0 22556 3402 20597 189373;189374;189375;189376;189377;189378 150873;150874;150875;150876;150877 150874 5 IAEVGGVPYLLPLVNQK Unmodified 1809.04 0.040020906 4341 Q9H0W9 C11orf54 Ester hydrolase C11orf54 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 93.25 93.397 2 0.0074159 108680 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 50.284 41.095 13351000 0 0 0 0 0 0 0 1287800 0 1498600 1893000 1856700 0 1236700 5578100 22557 4341 20598 189379;189380;189381;189382;189383;189384 150878;150879;150880;150881 150881 4 IAFAITAIK Unmodified 946.58515 0.5851534 1885 P62269 RPS18 40S ribosomal protein S18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.53 2.94 1 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 80.015 79.058 2 0.005064 91153 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 84.743 28.196 1200600000 189180000 14397000 0 28901000 58297000 69125000 47615000 47249000 70992000 103610000 90643000 159120000 75737000 85482000 160250000 22558 1885 20599 189385;189386;189387;189388;189389;189390;189391;189392;189393;189394;189395;189396;189397;189398;189399 150882;150883;150884;150885;150886;150887;150888;150889;150890;150891;150892;150893;150894;150895 150884 14 IAFDAESDPSNAPGSGTEK Unmodified 1891.8436 0.84356552 3895 Q96JJ3 ELMO2 Engulfment and cell motility protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 48.675 48.379 2 2.4794E-38 53767 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 151.99 146.82 170330000 0 16955000 0 8972200 9874700 14820000 10932000 8197500 9801200 14367000 15807000 18814000 10940000 11474000 19373000 22559 3895 20600 189400;189401;189402;189403;189404;189405;189406;189407;189408;189409;189410;189411;189412 150896;150897;150898;150899;150900;150901;150902;150903;150904;150905;150906;150907;150908;150909 150900 14 IAFFSELK Unmodified 953.52222 0.52221879 3079 Q7Z392 TRAPPC11 Trafficking protein particle complex subunit 11 yes yes 0 0 0 By MS/MS 2 0 1 1 87.153 79.023 2 0.022229 102945 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.753 52.449 32312000 32312000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22560 3079 20601 189413 150910 150910 1 IAFGGETDEATR Unmodified 1265.5888 0.58879481 1665 P51648 ALDH3A2 Fatty aldehyde dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.311 41.489 2 2.3682E-05 45990 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 91.658 74.146 99115000 0 0 0 16929000 4222500 6231300 5065500 7328200 4990500 9570700 7978300 11938000 7499000 6909900 10452000 22561 1665 20602 189414;189415;189416;189417;189418;189419;189420;189421;189422;189423;189424;189425 150911;150912;150913;150914;150915;150916;150917;150918;150919;150920;150921;150922;150923 150916 13 IAFIAWK Unmodified 847.49561 0.49561011 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 79.164 79.311 2 0.02563 91660 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 80.377 32.135 51026000 0 0 0 0 0 8134400 3549200 0 3790200 8051000 3778800 7494400 0 5849000 10379000 22562 2804 20603 189426;189427;189428;189429;189430;189431;189432;189433 150924;150925;150926;150927;150928;150929;150930 150924 7 IAFIFNNLSQSNMTQK Oxidation (M) 1870.9247 0.92473315 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 82.469 82.508 2 1.3274E-27 95664 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 130.56 109.17 58440000 0 0 0 3406100 4240400 9627800 4978200 4863900 5228300 7682800 5823000 12589000 0 0 0 22563 19 20604 189434;189435;189436;189437;189438;189439;189440;189441;189442 150931;150932;150933;150934;150935;150936;150937;150938 150938 16 8 IAFLGDDESALDNDETQFK Unmodified 2126.9644 0.96440894 4292 Q9C0I1 MTMR12 Myotubularin-related protein 12 yes yes 0 0 0 By MS/MS By matching 2.33 0.471 2 1 2 1 85.263 81.779 2 3.8097E-133 101489 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 214.42 206.81 61030000 0 59985000 1045600 0 0 0 0 0 0 0 0 0 0 0 0 22564 4292 20605 189443;189444;189445 150939;150940 150939 2 IAGAIGPCVSLNVK Unmodified 1397.7701 0.77007041 2537 Q15437 SEC23B Protein transport protein Sec23B yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 78.951 72.518 2 3.3091E-05 93446 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 115.57 102.48 88848000 27027000 61821000 0 0 0 0 0 0 0 0 0 0 0 0 0 22565 2537 20606 189446;189447 150941;150942 150942 2 IAGFDER Unmodified 806.39227 0.39226725 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 32.455 32.704 2 0.023433 34724 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 85.359 38.593 704530000 0 0 0 0 48275000 55914000 49763000 42237000 0 73934000 89532000 91834000 80799000 72354000 99889000 22566 1986 20607 189448;189449;189450;189451;189452;189453;189454;189455;189456;189457 150943;150944;150945;150946 150946 3 IAGFDSIFK Unmodified 996.52803 0.52803245 3709 Q93074 MED12 Mediator of RNA polymerase II transcription subunit 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82.693 81.717 2 0.017618 94662 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 55.531 26.192 73826000 12398000 8442400 3624300 1337200 1572400 4124800 2531900 3595600 4656800 3992300 4277400 4156100 3077000 4085800 11954000 22567 3709 20608 189458;189459;189460;189461;189462;189463;189464;189465;189466;189467;189468;189469;189470;189471;189472 150947;150948;150949;150950;150951;150952;150953;150954;150955;150956;150957 150948 11 IAGGTSLEVAR Unmodified 1072.5877 0.58767259 4424 Q9H6T0 ESRP2 Epithelial splicing regulatory protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.759 39.938 2 0.0012174 45063 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 74.269 36.541 246990000 0 0 0 11515000 10793000 17698000 18607000 19785000 13430000 22490000 21238000 31267000 22566000 20454000 37142000 22568 4424 20609 189473;189474;189475;189476;189477;189478;189479;189480;189481;189482;189483;189484 150958;150959;150960;150961;150962;150963;150964;150965;150966;150967;150968;150969;150970 150969 11 IAGHPLAQNER Unmodified 1204.6313 0.63126874 5022 Q9UMY4 SNX12 Sorting nexin-12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 2 2 2 2 2 2 2 2 2 14.896 15 2;3 0.0072141 14678 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.663 40.546 267660000 0 0 0 25767000 9623900 27828000 32209000 0 15347000 38172000 49789000 0 30164000 38756000 0 22569 5022 20610 189485;189486;189487;189488;189489;189490;189491;189492;189493;189494;189495;189496;189497;189498;189499;189500;189501;189502 150971;150972;150973;150974;150975 150972 4 IAGLAVSLTK Unmodified 971.60153 0.60153174 3619 Q92542 NCSTN Nicastrin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 68.214 68.155 2 0.010696 79043 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 55.549 21.753 17530000 0 0 0 2243200 1584600 2612800 2261700 3070300 2029400 0 3728100 0 0 0 0 22570 3619 20611 189503;189504;189505;189506;189507;189508;189509 150976;150977;150978;150979;150980;150981 150980 6 IAGLYNDSEPPRK Unmodified 1458.7467 0.74669243 3821 Q96ES7 CCDC101 SAGA-associated factor 29 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 7 1 1 1 1 1 1 1 36.75 36.949 3 0.024092 40750 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 28.361 14.397 79064000 0 0 0 0 6240800 0 7226400 0 8081700 14318000 16971000 18334000 0 7892600 0 22571 3821 20612 189510;189511;189512;189513;189514;189515;189516 150982 150982 1 IAGMDPVVHSALQEER Oxidation (M) 1766.8621 0.8621329 4666 Q9NVE7 PANK4 Pantothenate kinase 4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching 10 0 12 2 2 1 2 1 2 1 1 47.728 47.67 3 8.759E-11 53511 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 92.977 77.158 414240000 0 0 0 95610000 173940000 97223000 14761000 8142400 9935200 6180700 0 8446900 0 0 0 22572 4666 20613 189517;189518;189519;189520;189521;189522;189523;189524;189525;189526;189527;189528 150983;150984;150985;150986 150983 6080 3 IAGMDPVVHSALQEER Unmodified 1750.8672 0.86721827 4666 Q9NVE7 PANK4 Pantothenate kinase 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 2 1 1 1 64.554 64.442 2;3 1.32E-19 73914 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 100.19 72.706 170270000 0 0 0 24582000 46553000 85915000 4198600 5735800 3286200 0 0 0 0 0 0 22573 4666 20613 189529;189530;189531;189532;189533;189534;189535 150987;150988;150989;150990;150991;150992;150993;150994 150989 8 IAGPFGLSLVQR Unmodified 1256.7241 0.7241065 3529 Q8WTS1 ABHD5 1-acylglycerol-3-phosphate O-acyltransferase ABHD5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 85.107 85.236 2 0.045439 98431 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.589 30.066 26241000 0 0 0 0 0 3091300 0 0 2266900 3490900 2491900 4631600 2245400 2611400 5412100 22574 3529 20614 189536;189537;189538;189539;189540;189541;189542;189543 150995 150995 1 IAGPGLGSGVR Unmodified 982.55598 0.55597854 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.739 39.918 2 0.008256 45141 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 81.338 52.915 229020000 0 0 0 17770000 8902700 18618000 13369000 12261000 8090100 18291000 29424000 31304000 13551000 17379000 40058000 22575 487 20615 189544;189545;189546;189547;189548;189549;189550;189551;189552;189553;189554;189555 150996;150997;150998;150999;151000;151001;151002;151003;151004;151005;151006;151007 151006 7 IAGQVAAANK Unmodified 941.52943 0.52942943 1401 P39019 RPS19 40S ribosomal protein S19 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.545 13.704 2 0.000531 12981 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 133.6 81.197 1315200000 0 0 0 61544000 79167000 68519000 50014000 50953000 48587000 117650000 130980000 188330000 160870000 137120000 221490000 22576 1401 20616 189556;189557;189558;189559;189560;189561;189562;189563;189564;189565;189566;189567 151008;151009;151010;151011;151012;151013;151014;151015;151016;151017;151018;151019;151020;151021 151020 14 IAGVDYVYFVQK Unmodified 1400.734 0.73400248 3609 Q92503 SEC14L1 SEC14-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.43 2.06 1 13 1 2 1 1 1 1 1 1 1 1 1 1 1 81.267 81.113 2 1.248E-08 93967 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 138.11 90.291 471310000 0 0 3297200 19739000 31736000 39458000 26542000 42936000 29399000 56870000 49101000 58210000 27655000 26881000 59491000 22577 3609 20617 189568;189569;189570;189571;189572;189573;189574;189575;189576;189577;189578;189579;189580;189581 151022;151023;151024;151025;151026;151027;151028;151029;151030;151031;151032;151033;151034 151023 10 IAGVGSLPLSGVEEK Unmodified 1454.7981 0.7980593 5015 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.846 76.906 2 7.9022E-27 88878 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 129.82 100.86 74140000 0 0 0 3371200 4243700 4926900 5630500 5781000 5215700 6263000 5485500 9175700 6675400 6798900 10573000 22578 5015 20618 189582;189583;189584;189585;189586;189587;189588;189589;189590;189591;189592;189593 151035;151036;151037;151038;151039;151040;151041;151042 151040 8 IAGYVTHLMK Unmodified 1131.6111 0.61105057 871 P08708 RPS17 40S ribosomal protein S17 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 54.699 53.547 2 0.00023241 76963 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 119.21 73.493 201640000 39839000 8168700 0 8458400 7536400 17343000 9986500 8687000 9888600 22781000 21168000 0 21295000 26486000 0 22579 871 20619 189594;189595;189596;189597;189598;189599;189600;189601;189602;189603;189604;189605;189606 151043;151044;151045;151046;151047;151048;151049;151050;151051;151052;151053;151054 151048 10 IAGYVTHLMK Oxidation (M) 1147.606 0.6059652 871 P08708 RPS17 40S ribosomal protein S17 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 21 1 1 2 2 2 2 1 2 2 2 2 2 37.693 37.937 2;3 0.0014953 40511 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.161 59.222 776270000 0 0 0 10086000 13074000 68310000 62066000 62920000 55910000 20510000 107470000 34241000 128870000 97612000 115200000 22580 871 20619 189607;189608;189609;189610;189611;189612;189613;189614;189615;189616;189617;189618;189619;189620;189621;189622;189623;189624;189625;189626;189627 151055;151056;151057;151058;151059;151060;151061;151062;151063;151064 151058 1124 1 IAHIMGPPDR Unmodified 1105.5702 0.57024839 3690 Q92945 KHSRP Far upstream element-binding protein 2 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS 10 0 4 1 1 1 1 35.886 36.072 2 0.024054 38604 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.161 31.024 12057000 0 0 0 0 2077300 0 0 0 3281800 0 0 0 2154500 0 4543100 22581 3690 20620 189628;189629;189630;189631 151065 151065 1 IAHLAGVK Unmodified 807.49667 0.49667274 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21.344 20.921 2 0.0061524 20920 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 103.29 35.909 582270000 145500000 0 107040000 14256000 10133000 13707000 14116000 19825000 9791100 26942000 49746000 55346000 32486000 25951000 57439000 22582 965 20621 189632;189633;189634;189635;189636;189637;189638;189639;189640;189641;189642;189643;189644;189645 151066;151067;151068;151069;151070;151071;151072;151073;151074;151075;151076;151077;151078;151079;151080 151074 15 IAIEDPFSVK Unmodified 1117.6019 0.60192568 2792 Q5TAX3 ZCCHC11 Terminal uridylyltransferase 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 79.743 79.74 2 0.010483 92537 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 76.827 50.225 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22583 2792 20622 189646;189647;189648;189649 151081;151082;151083;151084 151083 4 IAIIVDDIIDDVDSFLAAAETLK Unmodified 2459.3047 0.30468761 388 O60256 PRPSAP2 Phosphoribosyl pyrophosphate synthase-associated protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 107.94 99.812 3 3.7418E-05 127926 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.87 61.818 3903800 3903800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22584 388 20623 189650 151085 151085 1 IAILGYR Unmodified 804.48577 0.48577371 2524 Q15382 RHEB GTP-binding protein Rheb yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 62.644 62.739 2 0.022978 71548 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 103.41 28.577 145500000 0 0 0 12801000 7120000 0 0 0 6451100 17061000 19625000 19807000 14269000 16274000 32089000 22585 2524 20624 189651;189652;189653;189654;189655;189656;189657;189658;189659 151086;151087;151088;151089;151090 151087 5 IAILTCPFEPPKPK Unmodified 1609.8902 0.89018555 1548 P48643 CCT5 T-complex protein 1 subunit epsilon yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 4 2 12 3 2 1 1 1 1 1 1 1 1 1 1 1 1 1 79.64 77.987 2;3 0.00034897 89411 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 68.171 63.28 1553800000 326900000 67890000 18887000 32067000 27885000 127390000 47245000 55494000 56694000 105930000 115490000 130090000 74195000 99901000 267690000 22586 1548 20625 189660;189661;189662;189663;189664;189665;189666;189667;189668;189669;189670;189671;189672;189673;189674;189675;189676;189677 151091;151092;151093;151094;151095;151096;151097;151098;151099;151100;151101;151102;151103;151104;151105;151106;151107;151108;151109 151101 15 IAIPDASK Unmodified 813.45962 0.45961853 561 O75935 DCTN3 Dynactin subunit 3 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 38.828 38.921 2 0.012186 43090 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 75.213 45.875 91931000 0 0 0 5704700 6479900 0 8270400 7995000 4798800 13429000 14905000 0 0 0 30348000 22587 561 20626 189678;189679;189680;189681;189682;189683;189684;189685 151110 151110 1 IAIPGLAGAGNSVLLVSNLNPER Unmodified 2274.2696 0.26957993 1208 P26599 PTBP1 Polypyrimidine tract-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 95.486 95.619 3 0.00077983 110932 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.833 25.442 3602600 0 0 0 0 0 0 0 0 0 1356500 0 0 0 0 2246100 22588 1208 20627 189686;189687 151111;151112 151112 2 IAIWTTECENR Unmodified 1391.6503 0.65034921 826 P06730 EIF4E Eukaryotic translation initiation factor 4E yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 61.392 61.48 2 0.00034474 69272 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 88.496 67.625 74553000 0 0 0 3458300 3497500 7879600 4224100 0 5549000 0 10533000 11873000 5752800 6314600 15471000 22589 826 20628 189688;189689;189690;189691;189692;189693;189694;189695;189696;189697 151113;151114;151115;151116;151117;151118;151119;151120;151121;151122 151119 10 IAIYELLFK Unmodified 1108.6532 0.65323296 1513 P46783 RPS10 40S ribosomal protein S10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 95.149 95.256 2 0.0047566 110583 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 116.73 82.987 26076000 0 0 0 0 952130 2425300 716780 1467200 1401600 3179300 2037100 0 730590 2281700 10885000 22590 1513 20629 189698;189699;189700;189701;189702;189703;189704;189705;189706;189707 151123;151124;151125;151126;151127;151128;151129;151130;151131 151125 9 IALDFQR Unmodified 861.47085 0.47085192 1065 P17931 LGALS3 Galectin-3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 58.37 58.558 2 0.0174 66937 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 114.02 58.582 518560000 0 0 0 0 21425000 47819000 33185000 49143000 17245000 45553000 53316000 65728000 37799000 44298000 103050000 22591 1065 20630 189708;189709;189710;189711;189712;189713;189714;189715;189716;189717;189718 151132;151133;151134;151135;151136;151137 151135 6 IALEDVPEK Unmodified 1012.5441 0.54407645 296 O43148 RNMT mRNA cap guanine-N7 methyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 49.604 48.831 2 0.0026386 62473 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.04 84.426 401370000 0 290410000 2909400 7418300 8437200 10022000 11340000 6694600 10003000 17679000 21546000 0 7640600 7273900 0 22592 296 20631 189719;189720;189721;189722;189723;189724;189725;189726;189727;189728;189729;189730 151138;151139;151140;151141;151142;151143 151139 6 IALEGANVIYK Unmodified 1189.6707 0.67067394 1899 P62380 TBPL1 TATA box-binding protein-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 73.491 69.371 2 0.001464 87372 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.52 70.083 85423000 0 82479000 2944600 0 0 0 0 0 0 0 0 0 0 0 0 22593 1899 20632 189731;189732 151144 151144 1 IALGIPLPEIK Unmodified 1162.7325 0.73254592 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 91.959 90.697 2 0.00083155 110496 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 94.692 94.692 395310000 50432000 291990000 5410500 0 1968100 3382600 0 2813100 2845400 5139500 4165200 4214900 2812400 4982800 15154000 22594 1300 20633 189733;189734;189735;189736;189737;189738;189739;189740;189741;189742;189743;189744;189745;189746 151145;151146;151147;151148;151149;151150;151151;151152;151153;151154;151155;151156 151152 10 IALHTQR Unmodified 837.48209 0.48208531 2975 Q6UUV7 CRTC3 CREB-regulated transcription coactivator 3 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.661 13.823 2 0.03372 13108 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 71.715 18.005 107740000 0 0 0 5399400 6879300 6868700 8551600 7086400 6521400 8758200 11889000 12653000 11655000 7212800 14261000 22595 2975 20634 189747;189748;189749;189750;189751;189752;189753;189754;189755;189756;189757;189758 151157 151157 1 IALLEEAK Unmodified 885.51713 0.51713341 1345 P35241 RDX Radixin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 56.115 54.217 2 0.0065186 60275 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 100.19 58.536 1810800000 69572000 1554600000 70615000 4002400 5281400 6511300 0 5093900 4598100 12619000 43308000 0 0 34558000 0 22596 1345 20635 189759;189760;189761;189762;189763;189764;189765;189766;189767;189768;189769;189770;189771;189772;189773 151158;151159;151160;151161;151162;151163;151164;151165;151166;151167;151168;151169 151166 12 IALLEEARR Unmodified 1069.6244 0.62439245 1017 P15311 EZR Ezrin yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 47.189 47.655 2 0.035429 52330 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.181 48.905 51323000 0 0 0 0 0 0 0 1741000 0 0 9331200 7885400 0 8067400 24298000 22597 1017 20636 189774;189775;189776;189777;189778 151170 151170 1 IALLNVELELK Unmodified 1253.7595 0.75948895 4065 Q99832 CCT7 T-complex protein 1 subunit eta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 2 3 1 95.08 90.586 2 4.7941E-09 114064 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 129.38 85.575 324500000 275970000 46498000 2022200 0 0 0 0 0 0 0 0 0 0 0 0 22598 4065 20637 189779;189780;189781;189782;189783;189784 151171;151172;151173;151174;151175;151176;151177 151176 6 IALNVAGK Unmodified 784.48069 0.48068833 4656 Q9NUY8 TBC1D23 TBC1 domain family member 23 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40.468 39.749 2 0.019477 49995 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.838 15.973 319240000 55142000 116320000 0 6216900 8320500 14378000 11796000 8313700 8988900 19559000 19119000 22132000 6712800 6174300 16064000 22599 4656 20638 189785;189786;189787;189788;189789;189790;189791;189792;189793;189794;189795;189796;189797;189798 151178;151179;151180 151179 3 IALQPSGSLL Unmodified 997.5808 0.5807963 504 O75474 FRAT2 GSK-3-binding protein FRAT2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 82.93 83.029 2 0.0088749 95986 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 58.981 35.458 40383000 0 0 0 0 3638500 2943600 3392300 3737500 3713200 4071200 0 4877100 0 5960300 8048900 22600 504 20639 189799;189800;189801;189802;189803;189804;189805;189806;189807 151181;151182;151183;151184 151181 4 IALSIQK Unmodified 771.48544 0.48543935 2750 Q5PRF9 SAMD4B Protein Smaug homolog 2 yes yes 0 0 0 By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 44.746 44.832 2 0.040686 48994 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.485 16.186 99600000 0 0 0 7507200 8024700 8284600 10590000 8378200 7746300 9966300 0 0 9830300 11735000 17537000 22601 2750 20640 189808;189809;189810;189811;189812;189813;189814;189815;189816;189817 151185 151185 1 IALSPITK Unmodified 841.5273 0.52730417 3548 Q8WUM0 NUP133 Nuclear pore complex protein Nup133 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 8 3.46 3 9 1 1 1 1 1 1 1 1 1 1 1 1 53.138 51.685 2 0.016501 57244 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.169 40.207 399350000 97147000 96009000 6342500 20377000 20102000 18542000 19086000 22251000 0 32798000 0 0 25222000 21103000 20371000 22602 3548 20641 189818;189819;189820;189821;189822;189823;189824;189825;189826;189827;189828;189829 151186;151187;151188 151187 2 IALTDNALIAR Unmodified 1169.6768 0.67682195 1072 P18124 RPL7 60S ribosomal protein L7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 71.986 72.056 2 2.4564E-74 82837 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 203.35 122.05 691380000 0 0 0 34443000 40070000 41269000 39176000 36938000 34991000 70945000 74408000 89622000 74344000 80146000 75031000 22603 1072 20642 189830;189831;189832;189833;189834;189835;189836;189837;189838;189839;189840;189841;189842;189843;189844;189845;189846;189847;189848;189849;189850;189851;189852;189853 151189;151190;151191;151192;151193;151194;151195;151196;151197;151198;151199;151200;151201 151190 11 IALYELMK Unmodified 979.54124 0.54123967 456 O75122 CLASP2 CLIP-associating protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 81.266 80.028 2 0.013245 92390 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.789 57.157 34713000 11971000 0 0 0 0 3894100 2625700 2731800 0 0 0 0 0 5178900 8310800 22604 456 20643 189854;189855;189856;189857;189858;189859 151202;151203;151204;151205;151206;151207 151204 6 IALYETPTGWK Unmodified 1277.6656 0.66558856 1380 P36871 PGM1 Phosphoglucomutase-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.12 3.89 3 1 4 1 2 1 1 1 1 1 76.461 73.852 2 4.6634E-09 92572 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 152.34 142.38 1783700000 251340000 1219200000 152460000 0 0 0 0 0 0 0 34746000 0 0 25180000 100770000 22605 1380 20644 189860;189861;189862;189863;189864;189865;189866;189867 151208;151209;151210;151211;151212;151213;151214;151215;151216;151217;151218 151209 11 IALYGLGSIPDER Unmodified 1402.7456 0.7456298 1614 P49959 MRE11A Double-strand break repair protein MRE11A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.038 82.1 2 2.5907E-09 94933 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 114.83 96.925 173840000 0 0 0 4064000 8468900 13959000 9742600 12544000 8664700 22158000 18297000 19261000 8827700 13806000 34051000 22606 1614 20645 189868;189869;189870;189871;189872;189873;189874;189875;189876;189877;189878;189879 151219;151220;151221;151222;151223;151224;151225;151226;151227;151228;151229;151230;151231;151232 151221 14 IAMENDDGRTEEEK Unmodified 1635.7046 0.7046292 3576 Q8WWM7 ATXN2L Ataxin-2-like protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.749 18.945 3 0.00023225 17924 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.204 70.323 154710000 0 0 0 11676000 8204400 12682000 10256000 11034000 11926000 17032000 11264000 11436000 15008000 11825000 22371000 22607 3576 20646 189880;189881;189882;189883;189884;189885;189886;189887;189888;189889;189890;189891 151233;151234;151235;151236;151237;151238;151239;151240;151241;151242;151243;151244 151236 11 IAMENDDGRTEEEK Oxidation (M) 1651.6995 0.69954382 3576 Q8WWM7 ATXN2L Ataxin-2-like protein yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 8.2347 8.3839 3 0.00011752 6915 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 77.527 68.477 59887000 0 0 0 5102700 0 3250200 3349800 3287900 4437000 5496200 6836400 8747200 6191200 5654200 7534300 22608 3576 20646 189892;189893;189894;189895;189896;189897;189898;189899;189900;189901;189902 151245;151246;151247;151248;151249;151250;151251;151252 151251 5070 8 IAMTTCEQIVRK Unmodified 1448.748 0.74795476 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 43.364 42.784 3 0.00030457 47216 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 85.924 65.827 71087000 19727000 0 0 0 2687600 8948500 1846000 4299800 0 4273800 5609900 8093500 0 4740800 10860000 22609 19 20647 189903;189904;189905;189906;189907;189908;189909;189910;189911;189912 151253;151254;151255;151256;151257;151258;151259;151260 151260 7 IANAIMK Unmodified 759.4313 0.43129529 854 P07954 FH Fumarate hydratase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.33 3.77 3 6 1 1 1 1 1 1 1 1 1 29.045 27.774 2 0.011136 37945 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 126.68 65.351 767420000 204330000 492350000 15057000 0 0 1768300 0 0 0 2569000 11352000 10822000 0 8592700 20576000 22610 854 20648 189913;189914;189915;189916;189917;189918;189919;189920;189921 151261;151262;151263;151264;151265;151266;151267;151268;151269 151267 9 IANAIMK Oxidation (M) 775.42621 0.42620992 854 P07954 FH Fumarate hydratase, mitochondrial yes yes 0 1 0 By matching By MS/MS By MS/MS By matching By MS/MS 6.17 3.85 2 1 3 1 2 1 1 1 16.31 14.491 1;2 0.01594 14197 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 83.287 42.435 89798000 6504100 65218000 0 3931500 0 0 0 0 1028300 0 13116000 0 0 0 0 22611 854 20648 189922;189923;189924;189925;189926;189927 151270;151271;151272;151273 151272 1077 3 IANAVVQNLER Unmodified 1225.6779 0.67788459 469 O75170 PPP6R2 Serine/threonine-protein phosphatase 6 regulatory subunit 2 yes yes 0 0 0 By MS/MS 10 0 1 1 55.344 55.968 2 0.00047061 62779 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.213 56.008 5732500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5732500 22612 469 20649 189928 151274 151274 1 IANFVEHK Unmodified 956.50797 0.50796571 5301 Q9Y6Y8 SEC23IP SEC23-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.42 3.66 3 1 8 1 2 1 1 1 1 1 1 1 1 1 30.772 26.299 2 0.010673 36259 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 111.82 58.261 244270000 143450000 38774000 62044000 0 0 0 0 0 0 0 0 0 0 0 0 22613 5301 20650 189929;189930;189931;189932;189933;189934;189935;189936;189937;189938;189939;189940 151275;151276;151277;151278;151279;151280;151281;151282;151283;151284;151285;151286;151287 151280 13 IANLAYVTK Unmodified 991.57023 0.57023162 4513 Q9HCE1 MOV10 Putative helicase MOV-10 yes yes 0 0 0 By MS/MS 2 0 1 1 56.438 50.616 2 0.0075334 65428 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.139 43.634 46304000 0 46304000 0 0 0 0 0 0 0 0 0 0 0 0 0 22614 4513 20651 189941 151288;151289 151289 2 IANLGSCNDSK Unmodified 1177.5397 0.53973612 4523 Q9HCY8 S100A14 Protein S100-A14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 19.819 20.027 2 0.00029188 20605 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 93.667 52.237 38613000 0 0 0 30685000 0 0 0 0 2125900 0 0 5802100 0 0 0 22615 4523 20652 189942;189943;189944;189945;189946;189947;189948 151290;151291;151292;151293;151294;151295 151294 6 IANLQTDLSDGLR Unmodified 1414.7416 0.74160705 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 72.628 72.74 2 1.9517E-13 84534 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 140.3 114.36 278830000 0 0 0 10743000 0 23157000 16870000 14176000 10641000 31143000 35604000 40506000 20080000 31547000 44364000 22616 1124 20653 189949;189950;189951;189952;189953;189954;189955;189956;189957;189958;189959 151296;151297;151298 151298 3 IANNSYACK Unmodified 1039.4757 0.4756793 117 O00141 SGK1 Serine/threonine-protein kinase Sgk1 yes yes 0 0 0 By MS/MS 2 0 1 1 13.89 10.576 2 0.020033 14209 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.738 56.933 9799700 0 9799700 0 0 0 0 0 0 0 0 0 0 0 0 0 22617 117 20654 189960 151299 151299 1 IANPDQLLTQDVEK Unmodified 1582.8203 0.82025131 1232 P28288 ABCD3 ATP-binding cassette sub-family D member 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 74.572 74.59 2 1.2747E-13 86445 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 112.13 98.463 19859000 0 0 0 6564000 0 0 2726500 5021000 0 0 0 5547700 0 0 0 22618 1232 20655 189961;189962;189963;189964;189965 151300;151301;151302;151303;151304 151303 5 IANPVEGSSGR Unmodified 1085.5465 0.54653606 2520 Q15365 PCBP1 Poly(rC)-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 25.927 26.128 2 2.7627E-05 28250 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 119.68 86.84 2355300000 0 0 0 118860000 125580000 200980000 210380000 124340000 105280000 211490000 268800000 241270000 191440000 201190000 355680000 22619 2520 20656 189966;189967;189968;189969;189970;189971;189972;189973;189974;189975;189976;189977 151305;151306;151307;151308;151309;151310;151311;151312;151313;151314;151315;151316;151317;151318;151319;151320 151313 15 IANPVEGSTDR Unmodified 1157.5677 0.56766543 2521 Q15366 PCBP2 Poly(rC)-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.748 29.94 2 1.9632E-05 32620 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 136.57 108.39 3478000000 0 0 0 225680000 154700000 256180000 263880000 242050000 162610000 282570000 337270000 347210000 336710000 265740000 603380000 22620 2521 20657 189978;189979;189980;189981;189982;189983;189984;189985;189986;189987;189988;189989 151321;151322;151323;151324;151325;151326;151327;151328;151329;151330;151331;151332;151333;151334;151335;151336;151337;151338 151327 18 IANTHLNR Unmodified 937.50936 0.50936269 2072 Q02241 KIF23 Kinesin-like protein KIF23 yes yes 0 0 0 By MS/MS 10 0 1 1 8.3614 8.7204 2 0.028761 6844 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 56.547 18.396 3104000 0 0 0 0 0 0 0 0 0 0 3104000 0 0 0 0 22621 2072 20658 189990 151339 151339 1 IANVFTNAFR Unmodified 1151.6087 0.60874239 802 P05164 MPO Myeloperoxidase;Myeloperoxidase;89 kDa myeloperoxidase;84 kDa myeloperoxidase;Myeloperoxidase light chain;Myeloperoxidase heavy chain yes yes 0 0 0 By MS/MS 10 0 1 1 77.143 77.225 2 0.0057424 89435 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 78.334 41.314 3982300 0 0 0 0 0 0 0 0 0 0 0 0 3982300 0 0 22622 802 20659 189991 151340 151340 1 IANVVINQSANDSK Unmodified 1471.7631 0.76307078 238 O14981 BTAF1 TATA-binding protein-associated factor 172 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 41.058 40.495 2 1.0448E-29 50564 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 143.97 117.93 173990000 0 82183000 0 5558200 4330400 10242000 6825500 3786400 5849900 9133300 11158000 11637000 7691500 5533600 10058000 22623 238 20660 189992;189993;189994;189995;189996;189997;189998;189999;190000;190001;190002;190003;190004;190005 151341;151342;151343;151344;151345;151346;151347;151348;151349;151350;151351;151352;151353;151354;151355 151344 15 IAPAAFSGQPQAVIMTSGPLK Oxidation (M) 2099.1085 0.10851118 4487 Q9HAP2 MLXIP MLX-interacting protein yes yes 0 1 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 79.758 79.88 2 2.0067E-05 92387 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 52.265 44.895 8743300 0 0 0 0 0 0 0 2632900 0 3751600 0 0 2358900 0 0 22624 4487 20661 190006;190007;190008 151356;151357 151356 5916 2 IAPAEAPDAK Unmodified 981.51311 0.51311067 153 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.15 21.354 2 0.0061036 20888 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 66.27 42.477 102830000 0 0 0 4075000 5543300 7853700 4501700 5652700 4428600 9276200 10895000 13688000 11803000 9394700 15723000 22625 153 20662 190009;190010;190011;190012;190013;190014;190015;190016;190017;190018;190019;190020 151358;151359;151360;151361;151362;151363;151364;151365 151362 8 IAPAFSSMSNK Unmodified 1151.5645 0.56449431 324 O43396 TXNL1 Thioredoxin-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 46.13 46.774 2 0.024219 52452 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 41.164 26.649 30858000 0 0 0 0 0 0 0 0 0 0 6566200 7468400 0 0 16823000 22626 324 20663 190021;190022;190023 151366;151367 151367 2 IAPASQIDSAWIVYNK Unmodified 1774.9254 0.92538508 4345 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 82.167 82.27 2 0.0010972 95693 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 65.574 49.685 44152000 0 0 0 0 1793200 6206300 2097800 4216400 2811500 6436400 4351200 5866600 2608700 0 7763800 22627 4345 20664 190024;190025;190026;190027;190028;190029;190030;190031;190032;190033 151368;151369;151370 151369 3 IAPDVLRK Unmodified 910.56 0.56000128 128 O00203;Q13367 AP3B1;AP3B2 AP-3 complex subunit beta-1;AP-3 complex subunit beta-2 yes no 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 37.173 32.221 2 0.04312 45353 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.69 55.739 67672000 59820000 0 7851600 0 0 0 0 0 0 0 0 0 0 0 0 22628 128 20665 190034;190035 151371 151371 1 IAPPEAPVTGYMFGK Oxidation (M) 1592.7909 0.79086543 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.188 74.249 2 7.9566E-06 85388 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 79.82 65.914 373780000 0 0 0 13330000 18355000 29076000 33423000 26600000 24154000 33569000 47403000 39004000 27607000 28851000 52412000 22629 894 20666 190036;190037;190038;190039;190040;190041;190042;190043;190044;190045;190046;190047 151372;151373;151374;151375;151376;151377;151378;151379;151380;151381 151372 1149 9 IAPPEAPVTGYMFGK Unmodified 1576.796 0.79595081 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.125 81.174 2 3.7424E-14 93636 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 99.215 84.796 323160000 0 0 0 9203300 7832400 24094000 16777000 20110000 0 36130000 46441000 42444000 16818000 26148000 77161000 22630 894 20666 190048;190049;190050;190051;190052;190053;190054;190055;190056;190057;190058;190059 151382;151383;151384;151385;151386;151387;151388;151389;151390;151391;151392 151385 11 IAPPETPDSK Unmodified 1053.5342 0.53424004 4768 Q9NZI8 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 29.682 29.855 2 0.0093306 31939 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.96 34.436 21782000 0 0 0 2362100 0 0 0 6593400 3299300 0 0 9526800 0 0 0 22631 4768 20667 190060;190061;190062;190063 151393 151393 1 IAPQYYDMSNFPQCEAK Oxidation (M) 2076.8921 0.89211239 295 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 64.75 59.418 2 2.9642E-07 75761 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.942 96.58 57688000 0 57688000 0 0 0 0 0 0 0 0 0 0 0 0 0 22632 295 20668 190064;190065 151394;151395 151394 377 2 IAPRPASGPIRPIVR Unmodified 1598.9733 0.97327875 1203 P26373 RPL13 60S ribosomal protein L13 yes yes 0 0 2 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 44.87 45.087 4 0.014365 48870 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.35 24.244 251040000 0 0 0 0 10561000 30743000 21891000 12672000 25400000 20454000 0 43839000 20770000 17211000 47503000 22633 1203 20669 190066;190067;190068;190069;190070;190071;190072;190073;190074;190075 151396;151397;151398;151399 151397 4 IAPSFAVESIEDALK Unmodified 1588.8348 0.83483874 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.78 3.71 5 1 3 2 2 2 1 1 1 95.865 93.017 2;3 1.7018E-10 115565 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 111.94 90.367 414480000 169330000 146910000 90040000 0 0 0 0 0 0 2180000 1343700 0 0 0 4668200 22634 1300 20670 190076;190077;190078;190079;190080;190081;190082;190083;190084 151400;151401;151402;151403;151404;151405;151406 151403 7 IAPVENDNSYDELK Unmodified 1605.7522 0.75223132 2460 Q14997 PSME4 Proteasome activator complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 7.44 3.62 2 1 6 1 2 1 1 1 1 1 1 52.951 51.897 2 3.9759E-05 58050 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 105.46 91.254 128960000 0 102250000 0 0 0 3839700 0 0 0 3595800 4067300 2425700 0 3812800 8965400 22635 2460 20671 190085;190086;190087;190088;190089;190090;190091;190092;190093 151407;151408;151409;151410;151411;151412 151410 6 IAPVHIDSEAISALVK Unmodified 1661.9352 0.93522148 2647 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 83.317 83.38 3 1.0593E-10 96538 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 95.347 71.157 146950000 0 0 0 1529500 1763700 9911000 2909700 8515700 9266100 30656000 11538000 15865000 6936700 10814000 37247000 22636 2647 20672 190094;190095;190096;190097;190098;190099;190100;190101;190102;190103;190104;190105 151413;151414;151415;151416;151417;151418;151419;151420;151421;151422;151423 151413 11 IAPVHIDTESISALIK Unmodified 1705.9614 0.96143623 4633 Q9NTI5 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 85.844 85.981 3 0.0026982 99427 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.592 24.77 7118300 0 0 0 0 0 0 0 0 0 1882900 0 0 0 0 5235400 22637 4633 20673 190106;190107 151424 151424 1 IAPVIGLK Unmodified 809.53747 0.53747492 1975 P78345 RPP38 Ribonuclease P protein subunit p38 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 59.945 60.009 2 0.026089 67313 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.167 26.232 58650000 0 0 0 11350000 5561600 4635900 4949000 5611900 3671100 0 0 7309800 7753100 0 7808000 22638 1975 20674 190108;190109;190110;190111;190112;190113;190114;190115;190116 151425;151426;151427;151428;151429 151427 5 IAPYSVEIK Unmodified 1018.5699 0.56989727 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 57.121 56.281 2 0.0042645 63922 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 114.28 77.261 3672400000 104850000 2918200000 0 40786000 37797000 50099000 47209000 50593000 30350000 61372000 54122000 59700000 42577000 69134000 105540000 22639 1986 20675 190117;190118;190119;190120;190121;190122;190123;190124;190125;190126;190127;190128;190129;190130;190131 151430;151431;151432;151433;151434;151435;151436;151437;151438;151439;151440;151441;151442;151443 151432 14 IAPYVAHNFSK Unmodified 1245.6506 0.6506072 951 P11498 PC Pyruvate carboxylase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 50.706 43.872 3 0.0003882 57448 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.819 59.188 76538000 58641000 17897000 0 0 0 0 0 0 0 0 0 0 0 0 0 22640 951 20676 190132;190133 151444;151445;151446 151444 3 IAQDLEMYGINYFEIK Oxidation (M) 1961.9445 0.94446554 1017 P15311 EZR Ezrin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.43 2.72 4 2 1 2 3 1 1 91.685 88.002 2 2.3541E-42 109961 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 151.99 125.37 153900000 20087000 126760000 3961300 0 0 0 0 0 0 0 0 0 0 0 3098200 22641 1017 20677 190134;190135;190136;190137;190138;190139;190140 151447;151448;151449;151450;151451;151452 151447 1413 6 IAQDLEMYGINYFEIK Unmodified 1945.9496 0.94955092 1017 P15311 EZR Ezrin yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 95.731 91.693 2 0.00028467 113826 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.45 80.579 55114000 0 55114000 0 0 0 0 0 0 0 0 0 0 0 0 0 22642 1017 20677 190141;190142 151453;151454;151455 151453 3 IAQDLEMYGVNYFEIK Oxidation (M) 1947.9288 0.92881548 1345 P35241 RDX Radixin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 89.785 85.115 2 7.1088E-07 102713 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 101.6 77.744 158400000 10802000 142200000 5395900 0 0 0 0 0 0 0 0 0 0 0 0 22643 1345 20678 190143;190144;190145;190146 151456;151457;151458 151457 2044 3 IAQDLEMYGVNYFEIK Unmodified 1931.9339 0.93390085 1345 P35241 RDX Radixin yes yes 0 0 0 By MS/MS 2 0 1 1 94.542 86.411 2 7.8866E-07 111799 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 131.32 117.06 31700000 31700000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22644 1345 20678 190147 151459 151459 1 IAQDLEMYGVNYFSIK Oxidation (M) 1905.9183 0.91825079 1198 P26038 MSN Moesin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.83 3.67 3 1 2 1 2 1 1 1 88.061 85.01 2 1.1196E-40 106061 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145 124.16 242190000 16267000 201700000 6012700 0 0 0 0 0 0 0 4397500 0 0 0 13818000 22645 1198 20679 190148;190149;190150;190151;190152;190153 151460;151461;151462;151463;151464;151465 151460 1736 6 IAQDLEMYGVNYFSIK Unmodified 1889.9233 0.92333617 1198 P26038 MSN Moesin yes yes 0 0 0 By MS/MS 2 0 2 2 94.152 86.022 2;3 0.016883 111480 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.32 43.118 42418000 42418000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22646 1198 20679 190154;190155 151466;151467 151467 2 IAQEIASLSK Unmodified 1058.5972 0.59717465 2516 Q15311 RALBP1 RalA-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS 5 3.56 1 1 1 2 1 51.473 46.139 2 0.0017407 59921 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.44 37.209 88871000 0 88871000 0 0 0 0 0 0 0 0 0 0 0 0 0 22647 2516 20680 190156;190157;190158 151468;151469 151468 2 IAQEVQR Unmodified 842.46102 0.46101552 3258 Q8IXH7 NELFCD Negative elongation factor C/D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 10.425 10.566 2 0.018785 9516 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 111.28 16.609 117120000 0 0 0 8516800 4788000 9278000 7169000 6416700 4095700 11798000 11807000 17354000 9616100 9319500 16965000 22648 3258 20681 190159;190160;190161;190162;190163;190164;190165;190166;190167;190168;190169;190170 151470;151471;151472;151473;151474;151475;151476;151477;151478;151479;151480;151481 151472 12 IAQGVSGSIQDK Unmodified 1201.6303 0.63026569 1114 P20839 IMPDH1 Inosine-5'-monophosphate dehydrogenase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 28.666 27.534 2 0.00012647 29801 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 87.066 52.263 420480000 8821200 345140000 0 4783700 0 0 7713700 5878900 5713300 0 17771000 0 0 0 24657000 22649 1114 20682 190171;190172;190173;190174;190175;190176;190177;190178;190179 151482;151483;151484;151485;151486;151487;151488;151489;151490 151488 9 IAQITGPPDR Unmodified 1066.5771 0.57710791 3737 Q96AE4 FUBP1 Far upstream element-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.501 37.682 2 0.00058764 41813 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 130.75 82.186 977250000 0 0 0 45042000 39116000 40719000 48893000 45996000 45398000 75220000 96644000 152170000 77667000 92064000 218310000 22650 3737 20683 190180;190181;190182;190183;190184;190185;190186;190187;190188;190189;190190;190191 151491;151492;151493;151494;151495;151496;151497;151498;151499;151500;151501;151502;151503 151500 12 IAQLASITGPQSR Unmodified 1340.7412 0.74121312 3915 Q96L91 EP400 E1A-binding protein p400 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 57.37 57.49 2 1.5151E-15 65431 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 146.11 105.08 173090000 0 0 0 11556000 10271000 14537000 12973000 15970000 13221000 14843000 12274000 16581000 16166000 15305000 19389000 22651 3915 20684 190192;190193;190194;190195;190196;190197;190198;190199;190200;190201;190202;190203 151504;151505;151506;151507;151508;151509;151510;151511;151512;151513;151514;151515;151516 151504 13 IAQLCNK Unmodified 845.44292 0.44292261 1134 P22102 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 17.939 14.76 2 0.020844 19279 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.01 61.608 791360000 0 786820000 4543600 0 0 0 0 0 0 0 0 0 0 0 0 22652 1134 20685 190204;190205;190206 151517;151518;151519;151520 151517 4 IAQLEEELEEEQGNTELINDR Unmodified 2471.1664 0.16635622 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 80.578 80.638 2;3 1.5491E-58 93134 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 148.87 128.77 310140000 0 0 0 6107300 19097000 26832000 9283900 19593000 16436000 47462000 37145000 44869000 9815200 13805000 59694000 22653 1356 20686 190207;190208;190209;190210;190211;190212;190213;190214;190215;190216;190217;190218;190219;190220;190221;190222;190223;190224;190225;190226;190227;190228;190229;190230 151521;151522;151523;151524;151525;151526;151527;151528;151529;151530;151531;151532;151533;151534;151535;151536 151535 16 IAQLEEELEEEQGNTELINDRLK Unmodified 2712.3454 0.34538322 1356 P35579 MYH9 Myosin-9 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS 6 4 2 2 1 1 1 1 83.236 81.511 3 2.268E-112 94325 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 144.92 137.33 70899000 0 24748000 15425000 0 0 0 0 0 0 15125000 0 0 0 0 15600000 22654 1356 20687 190231;190232;190233;190234 151537;151538;151539 151537 3 IAQLEEQLDNETK Unmodified 1529.7573 0.7573167 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.37 3.17 6 2 30 1 6 1 2 5 2 2 2 3 2 2 3 2 2 3 55.698 54.659 2;3 1.6525E-144 61806 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 261.41 238.77 9096300000 46896000 2286700000 9794000 427420000 502400000 521790000 549740000 490860000 424200000 616920000 669210000 944890000 590300000 473600000 541610000 22655 1356 20688 190235;190236;190237;190238;190239;190240;190241;190242;190243;190244;190245;190246;190247;190248;190249;190250;190251;190252;190253;190254;190255;190256;190257;190258;190259;190260;190261;190262;190263;190264;190265;190266;190267;190268;190269;190270;190271;190272 151540;151541;151542;151543;151544;151545;151546;151547;151548;151549;151550;151551;151552;151553;151554;151555;151556;151557;151558;151559;151560;151561;151562;151563;151564;151565;151566;151567;151568;151569;151570;151571;151572;151573;151574;151575;151576;151577;151578;151579;151580;151581;151582;151583;151584;151585;151586;151587;151588;151589;151590;151591;151592;151593;151594;151595;151596;151597;151598;151599 151588 54 IAQLICER Unmodified 1001.5328 0.53280025 1330 P33316 DUT Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.318 43.493 2 0.009853 47244 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.548 40.321 376650000 0 0 0 9351600 7766700 11820000 9611900 6590000 6019300 10440000 66196000 57726000 13398000 44382000 133350000 22656 1330 20689 190273;190274;190275;190276;190277;190278;190279;190280;190281;190282;190283;190284 151600;151601;151602;151603;151604;151605;151606 151602 7 IAQMTEEEQFALALK Oxidation (M) 1736.8655 0.86548694 3969 Q96RL1 UIMC1 BRCA1-A complex subunit RAP80 yes yes 0 1 0 By MS/MS 2 0 1 1 81.975 77.27 2 0.004648 96148 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.172 43.296 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22657 3969 20690 190285 151607 151607 5453 1 IAQRPGPMELVEK Oxidation (M) 1482.7864 0.78644876 4995;3728 Q9ULH7;Q969V6 MKL2;MKL1 MKL/myocardin-like protein 2;MKL/myocardin-like protein 1 no no 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 38.79 37.43 3 0.0013226 41298 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.726 37.468 106170000 55170000 0 3224000 0 0 6608900 4138500 0 6763200 0 7977700 0 22286000 0 0 22658 4995;3728 20691 190286;190287;190288;190289;190290;190291;190292 151608;151609;151610;151611;151612;151613 151608 5299 6 IAQRPGPMELVEK Unmodified 1466.7915 0.79153413 4995;3728 Q9ULH7;Q969V6 MKL2;MKL1 MKL/myocardin-like protein 2;MKL/myocardin-like protein 1 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 52.94 52.439 3 0.0020307 74821 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.532 36.853 277980000 101150000 0 0 8724700 9607400 15142000 12763000 16701000 9449500 16595000 16832000 16686000 13389000 17204000 23729000 22659 4995;3728 20691 190293;190294;190295;190296;190297;190298;190299;190300;190301;190302;190303;190304;190305 151614;151615;151616;151617;151618;151619;151620;151621 151617 8 IAQSAELADREK Unmodified 1329.6888 0.6888432 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 1 By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 21.711 21.903 3 0.0031131 22707 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 56.938 39.915 137540000 0 0 0 10487000 8680700 16591000 9535500 10662000 7434400 10987000 15695000 19291000 0 6978700 21200000 22660 5049 20692 190306;190307;190308;190309;190310;190311;190312;190313;190314;190315;190316 151622;151623 151623 1 IAQSDYIPTQQDVLR Unmodified 1745.8948 0.89481323 790 P04899 GNAI2 Guanine nucleotide-binding protein G(i) subunit alpha-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 71 71.013 2 0.0024648 82025 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 61.435 51.203 20798000 0 0 0 1578000 1451400 0 2123700 2167800 0 2744100 0 0 3498600 2434800 4799200 22661 790 20693 190317;190318;190319;190320;190321;190322;190323;190324;190325 151624;151625;151626 151625 3 IARPFIEALK Unmodified 1156.6968 0.69682911 3915 Q96L91 EP400 E1A-binding protein p400 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 64.282 64.512 3 0.0043967 72790 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.567 39.632 108710000 0 0 0 0 0 9690700 6407100 7969900 8921900 11347000 8368500 13778000 10892000 11418000 19919000 22662 3915 20694 190326;190327;190328;190329;190330;190331;190332;190333;190334;190335 151627;151628;151629;151630 151628 4 IARQESTSVLLQQSEK Unmodified 1815.969 0.96904081 2369 Q14126 DSG2 Desmoglein-2 yes yes 0 0 1 By MS/MS 2 0 1 1 52.36 44.345 3 0.0029287 61090 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.297 39.772 20431000 20431000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22663 2369 20695 190336 151631 151631 1 IASAPEPR Unmodified 839.45012 0.45011648 2921 Q6P1N0 CC2D1A Coiled-coil and C2 domain-containing protein 1A yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 15 1 2 1 1 2 1 2 1 1 2 1 17.256 17.407 2 0.010495 17401 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 79.469 41.823 271040000 0 0 0 7399200 17329000 12112000 12005000 18765000 11208000 27628000 13844000 12241000 121180000 0 17324000 22664 2921 20696 190337;190338;190339;190340;190341;190342;190343;190344;190345;190346;190347;190348;190349;190350;190351 151632;151633;151634 151634 3 IASDEEIQGTK Unmodified 1189.5826 0.5826468 3581 Q8WX93 PALLD Palladin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.953 22.161 2 2.8012E-05 22003 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 137.95 90.872 535390000 0 0 0 32616000 25743000 35538000 41991000 25749000 33076000 57962000 59210000 61137000 44873000 46984000 70508000 22665 3581 20697 190352;190353;190354;190355;190356;190357;190358;190359;190360;190361;190362;190363 151635;151636;151637;151638;151639;151640;151641;151642;151643;151644;151645;151646 151638 12 IASFPTAK Unmodified 833.4647 0.46470391 2197 Q12849 GRSF1 G-rich sequence factor 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 40.816 36.494 2 0.010502 47637 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.37 39.331 90446000 0 87566000 2880400 0 0 0 0 0 0 0 0 0 0 0 0 22666 2197 20698 190364;190365 151647 151647 1 IASLEVENQSLR Unmodified 1357.7201 0.72014333 1255 P29692 EEF1D Elongation factor 1-delta yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 2 1 1 1 1 1 1 1 1 56.773 56.893 2 6.8772E-56 64755 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 211.78 116.93 1791600000 0 0 0 66198000 71671000 114540000 102950000 90803000 78716000 145130000 240640000 228920000 89312000 127380000 435380000 22667 1255 20699 190366;190367;190368;190369;190370;190371;190372;190373;190374;190375;190376;190377;190378 151648;151649;151650;151651;151652;151653;151654;151655;151656;151657;151658;151659;151660 151648 13 IASLLGLLSK Unmodified 1013.6485 0.64848194 3871 Q96HW7 INTS4 Integrator complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 89.928 90.06 2 0.0021904 104224 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.731 61.576 8102700 0 0 0 0 0 933130 0 1181100 782550 1110700 0 0 0 795480 3299700 22668 3871 20700 190379;190380;190381;190382;190383;190384 151661;151662;151663;151664;151665 151663 5 IASLPQEVQDVSLLEK Unmodified 1767.9618 0.96183016 4569 Q9NQG5 RPRD1B Regulation of nuclear pre-mRNA domain-containing protein 1B yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 4 20 2 2 1 1 2 1 2 2 2 2 1 2 2 2 85.796 85.264 2;3 2.3045E-57 105743 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.81 120.07 1216900000 0 632360000 5355300 3267800 28361000 33596000 28601000 51969000 36999000 72976000 65903000 60578000 38257000 42784000 115920000 22669 4569 20701 190385;190386;190387;190388;190389;190390;190391;190392;190393;190394;190395;190396;190397;190398;190399;190400;190401;190402;190403;190404;190405;190406;190407;190408 151666;151667;151668;151669;151670;151671;151672;151673;151674;151675;151676;151677;151678;151679;151680;151681;151682;151683 151672 16 IASLPVEVQEVSLLDK Unmodified 1738.9717 0.97166657 3942 Q96P16 RPRD1A Regulation of nuclear pre-mRNA domain-containing protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 89.995 89.519 2 0.0001177 103696 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 74.392 50.049 145120000 0 74260000 1811700 0 3595800 3950700 3286200 4165200 2999500 12974000 8387100 8307700 3071900 4883200 13428000 22670 3942 20702 190409;190410;190411;190412;190413;190414;190415;190416;190417;190418;190419;190420;190421 151684;151685;151686;151687;151688;151689;151690;151691;151692;151693;151694;151695 151692 12 IASMAPGALLLEAQK Unmodified 1511.8381 0.83814998 4359 Q9H269 VPS16 Vacuolar protein sorting-associated protein 16 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 5 1 2 2 88.653 84.104 2;3 8.6964E-16 105345 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.083 80.606 163960000 67063000 91162000 5732400 0 0 0 0 0 0 0 0 0 0 0 0 22671 4359 20703 190422;190423;190424;190425;190426 151696;151697;151698;151699 151697 4 IASMAPGALLLEAQK Oxidation (M) 1527.8331 0.8330646 4359 Q9H269 VPS16 Vacuolar protein sorting-associated protein 16 homolog yes yes 0 1 0 By MS/MS 2 0 1 1 82.348 74.217 2 0.00053332 97095 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.697 69.325 29968000 29968000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22672 4359 20703 190427 151700 151700 5820 1 IASNAGSIA Unmodified 802.41848 0.418482 1913 P62829 RPL23 60S ribosomal protein L23 yes yes 0 0 0 By matching By matching By matching By MS/MS By matching 10 0 5 1 1 1 1 1 28.484 28.496 1 0.034436 31007 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 91.853 65.744 586190000 0 0 0 100250000 89374000 99334000 111320000 0 0 0 0 185920000 0 0 0 22673 1913 20704 190428;190429;190430;190431;190432 151701 151701 0 IASNVLNTK Unmodified 958.54475 0.54474515 2189 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.017 32.204 2 0.0036117 35568 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 102.51 59.39 136960000 0 0 0 7518600 11364000 10803000 9398700 9388400 6095900 14885000 10031000 16794000 14176000 11240000 15261000 22674 2189 20705 190433;190434;190435;190436;190437;190438;190439;190440;190441;190442;190443;190444 151702;151703;151704;151705;151706;151707;151708;151709;151710 151710 5 IASNVQK Unmodified 758.42865 0.42865276 162 O00499 BIN1 Myc box-dependent-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 6.5993 3.869 2 0.022419 6144 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.22 44.883 501120000 0 285860000 215260000 0 0 0 0 0 0 0 0 0 0 0 0 22675 162 20706 190445;190446 151711 151711 1 IASPEGQDYLK Unmodified 1219.6085 0.60846762 5168 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 46.584 46.299 2 7.5429E-06 58113 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.63 82.085 954200000 0 50504000 0 47471000 50041000 74719000 62296000 70236000 59278000 93196000 108870000 107400000 71622000 55621000 102940000 22676 5168 20707 190447;190448;190449;190450;190451;190452;190453;190454;190455;190456;190457;190458;190459 151712;151713;151714;151715;151716;151717;151718;151719;151720;151721;151722;151723;151724;151725;151726;151727;151728 151719 14 IASQELGPAVDK Unmodified 1226.6507 0.65066678 3495 Q8TD16 BICD2 Protein bicaudal D homolog 2 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 39.642 39.997 2 0.00021321 43287 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.17 55.083 14993000 0 0 0 0 0 0 0 3397700 0 5137300 0 0 0 0 6458200 22677 3495 20708 190460;190461;190462;190463 151729;151730 151729 2 IASQMITEGR Oxidation (M) 1120.5547 0.55465791 4137 Q9BT78 COPS4 COP9 signalosome complex subunit 4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 2 2 2 2 2 2 1 1 2 1 2 1 23.413 23.576 2 0.0016929 24217 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 82.287 32.717 138430000 0 0 0 9748500 8950400 10903000 12262000 8969500 5948000 9368600 8147200 22623000 12829000 15569000 13109000 22678 4137 20709 190464;190465;190466;190467;190468;190469;190470;190471;190472;190473;190474;190475;190476;190477;190478;190479;190480;190481;190482;190483 151731;151732;151733;151734;151735;151736;151737;151738;151739;151740;151741;151742;151743;151744;151745;151746 151733 5621 15 IASQMITEGR Unmodified 1104.5597 0.55974328 4137 Q9BT78 COPS4 COP9 signalosome complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.599 36.781 2 0.0027225 39385 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.755 55.832 248800000 0 0 0 12250000 9159300 19058000 15239000 13688000 8888500 21093000 25748000 35033000 24286000 21519000 42834000 22679 4137 20709 190484;190485;190486;190487;190488;190489;190490;190491;190492;190493;190494;190495 151747;151748;151749;151750;151751;151752;151753;151754;151755;151756;151757 151749 9 IASSQTTIWSR Unmodified 1248.6463 0.64625011 4398 Q9H4H8 FAM83D Protein FAM83D yes yes 0 0 0 By matching By matching By matching By MS/MS By matching 10 0 5 1 1 1 1 1 49.117 49.032 2 0.021125 55053 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 55.084 6.9929 30106000 0 0 0 4454600 3705600 0 5109800 0 0 0 10254000 0 0 6581700 0 22680 4398 20710 190496;190497;190498;190499;190500 151758 151758 1 IASSVTAGVASSLSEK Unmodified 1505.7937 0.7937022 3460 Q8NHV4 NEDD1 Protein NEDD1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.25 3.34 2 1 1 2 1 1 64.456 59.648 2 0.00069336 76440 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.53 67.991 64001000 0 60235000 3765500 0 0 0 0 0 0 0 0 0 0 0 0 22681 3460 20711 190501;190502;190503;190504 151759;151760;151761;151762 151759 4 IASTSEFLK Unmodified 994.53351 0.53351176 156 O00443 PIK3C2A Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha yes yes 0 0 0 By MS/MS By MS/MS 5 3.56 1 1 1 2 1 55.754 50.406 2 0.027921 65378 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.383 33.027 61692000 0 61692000 0 0 0 0 0 0 0 0 0 0 0 0 0 22682 156 20712 190505;190506;190507 151763;151764 151763 2 IASVLGISTPK Unmodified 1084.6492 0.64921022 3305 Q8N128 FAM177A1 Protein FAM177A1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 2 1 1 1 1 1 1 1 1 1 1 1 69.145 68.232 2 5.3381E-05 77906 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 114.97 65.55 86410000 6742800 9282100 0 3326900 3330500 4611100 4649600 6348500 5474400 8063300 7333000 12533000 7964000 6750700 0 22683 3305 20713 190508;190509;190510;190511;190512;190513;190514;190515;190516;190517;190518;190519;190520;190521 151765;151766;151767;151768;151769;151770;151771;151772;151773;151774;151775;151776;151777;151778;151779 151777 15 IASWADLVNAHVVPGSGVVK Unmodified 2018.0949 0.094910023 936 P11172 UMPS Uridine 5'-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5'-phosphate decarboxylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 91.166 86.877 3 1.3082E-07 109985 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.772 64.551 46746000 7707500 30551000 0 0 0 0 0 0 0 0 0 0 0 0 8488300 22684 936 20714 190522;190523;190524 151780;151781;151782;151783 151780 4 IATCSDDNTLK Unmodified 1236.5656 0.56561652 4769 Q9NZJ0 DTL Denticleless protein homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 22.141 21.026 2 0.00025517 26296 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.66 78.66 33756000 0 20469000 0 0 0 0 0 0 6518200 0 0 0 0 0 6768000 22685 4769 20715 190525;190526;190527 151784;151785;151786 151784 3 IATEFNQLQFHAVQSK Unmodified 1859.953 0.95299681 2443 Q14746 COG2 Conserved oligomeric Golgi complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 71.819 71.93 3 1.5369E-05 82174 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.324 50.918 29138000 0 0 0 2257700 0 0 0 0 0 3072200 3717200 3722000 3983500 3366700 9018700 22686 2443 20716 190528;190529;190530;190531;190532;190533;190534 151787;151788;151789;151790;151791;151792 151788 5 IATGHGQQGVTQVVLK Unmodified 1634.9104 0.91040372 1663 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.89 2.72 3 1 24 1 2 1 2 2 2 2 2 2 2 2 2 2 2 2 46.253 45.587 2;3 1.1554E-37 51138 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 141.65 121.99 2862200000 494060000 214500000 8371700 110790000 117130000 194370000 155560000 146940000 157590000 174750000 205340000 238670000 208460000 208280000 227410000 22687 1663 20717 190535;190536;190537;190538;190539;190540;190541;190542;190543;190544;190545;190546;190547;190548;190549;190550;190551;190552;190553;190554;190555;190556;190557;190558;190559;190560;190561;190562 151793;151794;151795;151796;151797;151798;151799;151800;151801;151802;151803;151804;151805;151806;151807;151808;151809;151810;151811;151812 151793 5 IATGHNIIDELPPCK Unmodified 1676.8556 0.85559095 2614 Q16563 SYPL1 Synaptophysin-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 71.243 67.213 3 0.0018675 83705 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 57.328 45.854 30625000 19407000 0 6681200 4537400 0 0 0 0 0 0 0 0 0 0 0 22688 2614 20718 190563;190564;190565 151813;151814;151815 151814 3 IATGQIAGVDK Unmodified 1071.5924 0.59242362 4505 Q9HC35 EML4 Echinoderm microtubule-associated protein-like 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.502 36.683 2 0.0010553 40586 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 75.387 42.547 170950000 0 0 0 10238000 11449000 14081000 10688000 10028000 5897600 15224000 14003000 16977000 18169000 19747000 24454000 22689 4505 20719 190566;190567;190568;190569;190570;190571;190572;190573;190574;190575;190576;190577 151816;151817;151818;151819;151820;151821;151822;151823;151824;151825;151826;151827 151818 11 IATGSFLK Unmodified 835.48035 0.48035398 1135 P22234 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.303 49.462 2 0.0063466 55788 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 101.64 62.807 1142900000 0 0 0 48862000 41517000 72101000 48811000 47391000 36094000 96454000 130560000 166230000 74173000 132440000 248290000 22690 1135 20720 190578;190579;190580;190581;190582;190583;190584;190585;190586;190587;190588;190589 151828;151829;151830;151831;151832;151833;151834;151835;151836;151837;151838;151839;151840 151830 12 IATIGSDRK Unmodified 959.53999 0.53999412 3762 Q96BP3 PPWD1 Peptidylprolyl isomerase domain and WD repeat-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 15.535 12.238 2 0.025848 15308 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 95.909 46.319 66742000 55187000 5721200 5833900 0 0 0 0 0 0 0 0 0 0 0 0 22691 3762 20721 190590;190591;190592 151841 151841 0 IATLISSFLK Unmodified 1091.659 0.65904662 653 O95394 PGM3 Phosphoacetylglucosamine mutase yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 96.469 89.993 2 8.6705E-05 113618 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.13 64.957 40685000 21562000 19123000 0 0 0 0 0 0 0 0 0 0 0 0 0 22692 653 20722 190593;190594 151842;151843 151842 2 IATQPTNPK Unmodified 968.5291 0.52909508 5119 Q9Y2U5 MAP3K2 Mitogen-activated protein kinase kinase kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 13.071 13.231 2 0.030157 12532 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 48.283 20.758 24721000 0 0 0 0 1506800 2630400 2047700 2120300 1198100 3187500 3376300 3562300 2041400 3050200 0 22693 5119 20723 190595;190596;190597;190598;190599;190600;190601;190602;190603;190604 151844 151844 1 IATSLDGFDVASVQQQR Unmodified 1833.9221 0.92209062 421 O60664 PLIN3 Perilipin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 38 3 4 3 3 3 3 3 3 3 3 4 3 76.994 77.044 2;3 0 89736 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 322.31 311.38 7372400000 0 0 0 273060000 461980000 540090000 496870000 684940000 459250000 768850000 683370000 985240000 603640000 554730000 860400000 22694 421 20724 190605;190606;190607;190608;190609;190610;190611;190612;190613;190614;190615;190616;190617;190618;190619;190620;190621;190622;190623;190624;190625;190626;190627;190628;190629;190630;190631;190632;190633;190634;190635;190636;190637;190638;190639;190640;190641;190642 151845;151846;151847;151848;151849;151850;151851;151852;151853;151854;151855;151856;151857;151858;151859;151860;151861;151862;151863;151864;151865;151866;151867;151868;151869;151870;151871;151872;151873;151874;151875;151876;151877;151878;151879;151880;151881 151874 27 IATTTASAATAAAIGATPR Unmodified 1714.9214 0.92136233 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 3 2 1 63.492 63.519 2;3 0.0039694 73077 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 58.487 34.5 11323000 0 0 0 0 5537600 0 0 0 0 0 0 0 0 0 5785900 22695 2459 20725 190643;190644;190645 151882;151883 151883 2 IAVAAQNCYK Unmodified 1136.5648 0.56482866 1808 P60174 TPI1 Triosephosphate isomerase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.56 3.86 3 1 5 1 2 1 1 1 1 1 1 32.16 30.267 2 2.757E-13 37033 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 185.42 145.32 3425700000 192950000 2335200000 33659000 39553000 0 0 0 0 0 0 121500000 236070000 0 111290000 355420000 22696 1808 20726 190646;190647;190648;190649;190650;190651;190652;190653;190654 151884;151885;151886;151887;151888;151889;151890;151891;151892;151893;151894;151895;151896;151897;151898;151899;151900 151892 17 IAVAVLEETTR Unmodified 1200.6714 0.67140222 1601;32 P49792;P0DJD0;P0DJD1;A6NKT7;Q7Z3J3 RANBP2;RGPD1;RGPD2;RGPD3;RGPD4 E3 SUMO-protein ligase RanBP2;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RanBP2-like and GRIP domain-containing protein 3;RanBP2-like and GRIP domain-containing protein 4 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 68.001 68.033 2 0.00030289 78232 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 102.61 63.461 26469000 0 0 0 0 3057000 4873300 4787500 0 3250800 5819800 4681000 0 0 0 0 22697 1601;32 20727 190655;190656;190657;190658;190659;190660;190661;190662;190663 151901;151902;151903;151904;151905;151906;151907;151908;151909 151901 9 IAVEAQNK Unmodified 871.47633 0.47633123 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 13.945 13.528 2 0.0024533 15731 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.37 74.784 1106900000 45163000 766480000 0 0 16898000 20931000 24644000 18261000 19050000 22419000 21527000 39878000 27519000 30577000 53503000 22698 965 20728 190664;190665;190666;190667;190668;190669;190670;190671;190672;190673;190674;190675;190676 151910;151911;151912;151913;151914;151915;151916;151917;151918;151919;151920;151921;151922 151912 8 IAVEFLR Unmodified 846.49634 0.49633839 3192 Q86X83 COMMD2 COMM domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.974 71.046 2 0.028147 80958 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.847 28.673 60167000 0 0 0 4665100 2691500 5547800 3920700 3999000 2926600 5541300 6769100 7577700 5097300 4217100 7213800 22699 3192 20729 190677;190678;190679;190680;190681;190682;190683;190684;190685;190686;190687;190688 151923;151924;151925;151926 151924 4 IAVEIPK Unmodified 768.47454 0.47454032 2978 Q6UW63 KDELC1 KDEL motif-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 59.757 53.915 2 0.036349 69123 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.614 29.089 109400000 0 109400000 0 0 0 0 0 0 0 0 0 0 0 0 0 22700 2978 20730 190689 151927 151927 1 IAVEPVNPSELPK Unmodified 1391.766 0.76603089 2481 Q15029 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 72.945 71.786 2 1.375E-07 82795 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 97.813 82.184 3126400000 24917000 2002600000 7091800 50842000 62159000 73375000 68239000 78096000 54134000 97657000 120100000 126350000 93341000 103370000 164190000 22701 2481 20731 190690;190691;190692;190693;190694;190695;190696;190697;190698;190699;190700;190701;190702;190703;190704;190705;190706 151928;151929;151930;151931;151932;151933;151934;151935;151936;151937;151938;151939;151940;151941;151942;151943;151944;151945 151928 18 IAVFYVAEGQEDK Unmodified 1467.7246 0.72456001 2880 Q6GYQ0 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 71.482 71.758 2 0.0027751 82052 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.019 39.551 9331400 0 0 0 0 0 0 3284800 0 0 0 0 0 0 0 6046600 22702 2880 20732 190707;190708;190709 151946;151947 151946 2 IAVHPDYQGMGYGSR Unmodified 1649.762 0.76202492 4319 Q9H0A0 NAT10 N-acetyltransferase 10 yes yes 0 0 0 By MS/MS 10 0 1 1 50.255 50.42 3 8.0616E-05 57030 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 55.885 42.169 6501000 0 0 0 0 0 0 0 6501000 0 0 0 0 0 0 0 22703 4319 20733 190710 151948 151948 1 IAVMELFRPK Oxidation (M) 1218.6795 0.67946449 2608 Q16531 DDB1 DNA damage-binding protein 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 2 2 2 1 1 1 2 2 2 67.031 67.031 3 0.002176 76875 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 65.347 65.347 102360000 0 0 0 7299200 5746000 13684000 0 5190400 2717700 8702100 14379000 0 10895000 0 33751000 22704 2608 20734 190711;190712;190713;190714;190715;190716;190717;190718;190719;190720;190721;190722;190723;190724;190725 151949;151950;151951;151952;151953;151954;151955;151956;151957;151958 151956 4254 10 IAVMELFRPK Unmodified 1202.6845 0.68454987 2608 Q16531 DDB1 DNA damage-binding protein 1 yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 79.833 79.974 3 0.043461 91954 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.652 35.652 42949000 0 0 0 0 0 2569100 718850 1690100 1541200 1257000 1807200 3351000 1727900 2163000 26123000 22705 2608 20734 190726;190727;190728;190729;190730;190731;190732;190733;190734;190735 151959 151959 1 IAVMSFPAEGVESALK Oxidation (M) 1663.8491 0.84910859 234 O14976 GAK Cyclin-G-associated kinase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.24 80.298 2 1.63E-19 92442 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.18 93.775 234880000 0 0 0 8236600 17432000 20159000 17157000 19851000 16150000 26273000 22039000 27835000 17322000 17368000 25054000 22706 234 20735 190736;190737;190738;190739;190740;190741;190742;190743;190744;190745;190746;190747 151960;151961;151962;151963;151964;151965;151966;151967;151968;151969;151970;151971;151972 151963 313 12 IAVMSFPAEGVESALK Unmodified 1647.8542 0.85419397 234 O14976 GAK Cyclin-G-associated kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 86.659 86.761 2 0.00030843 100569 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 67.776 43.925 76651000 0 0 0 0 4171100 3987100 2750000 9375500 0 9133800 6443300 9612500 0 7365000 23812000 22707 234 20735 190748;190749;190750;190751;190752;190753;190754;190755;190756;190757;190758 151973;151974;151975;151976;151977;151978;151979;151980;151981;151982;151983;151984 151973 12 IAVSIEDEANK Unmodified 1187.6034 0.60338224 4762 Q9NZB2 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 49.648 44.35 2 0.0050024 57383 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.009 78.915 116350000 0 116350000 0 0 0 0 0 0 0 0 0 0 0 0 0 22708 4762 20736 190759;190760 151985 151985 1 IAVSNLHK Unmodified 880.51305 0.51305109 1171 P23921 RRM1 Ribonucleoside-diphosphate reductase large subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.958 22.164 2 0.014324 22490 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 70.67 31.864 652380000 0 0 0 25375000 23472000 65829000 50352000 32021000 35167000 70861000 75442000 74538000 55561000 49697000 94062000 22709 1171 20737 190761;190762;190763;190764;190765;190766;190767;190768;190769;190770;190771;190772 151986;151987;151988;151989;151990;151991;151992;151993 151993 7 IAVYSCPFDGMITETK Oxidation (M) 1846.8481 0.84812231 1641 P50990 CCT8 T-complex protein 1 subunit theta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.14 3.88 8 3 11 1 8 2 1 1 1 1 1 1 1 1 1 1 1 76.909 74.898 2;3 4.2508E-66 92262 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 189.43 175.5 2683400000 51171000 1867900000 31645000 29131000 38886000 70497000 54237000 40577000 44250000 95413000 90311000 93161000 0 65428000 110760000 22710 1641 20738 190773;190774;190775;190776;190777;190778;190779;190780;190781;190782;190783;190784;190785;190786;190787;190788;190789;190790;190791;190792;190793;190794 151994;151995;151996;151997;151998;151999;152000;152001;152002;152003;152004;152005;152006;152007;152008;152009;152010;152011;152012;152013;152014;152015;152016;152017;152018;152019;152020 151999 2635 25 IAVYSCPFDGMITETK Unmodified 1830.8532 0.85320769 1641 P50990 CCT8 T-complex protein 1 subunit theta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.45 3.89 8 2 12 1 7 2 1 1 1 1 1 1 1 1 1 1 1 1 83.834 81.893 2;3 1.9485E-61 98074 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 184.03 174.35 9251000000 76664000 8368500000 38900000 9445900 23556000 72651000 21645000 39954000 33307000 74419000 77915000 75386000 28580000 63410000 246750000 22711 1641 20738 190795;190796;190797;190798;190799;190800;190801;190802;190803;190804;190805;190806;190807;190808;190809;190810;190811;190812;190813;190814;190815;190816 152021;152022;152023;152024;152025;152026;152027;152028;152029;152030;152031;152032;152033;152034;152035;152036;152037;152038;152039;152040;152041;152042;152043 152025 22 IAWALNK Unmodified 814.47012 0.47012364 5050;621 O95104;Q9UPN6 SCAF4;SCAF8 Splicing factor, arginine/serine-rich 15;Protein SCAF8 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.333 55.464 2 0.022164 61913 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 105.42 55.299 406050000 0 0 0 20236000 21703000 24339000 26932000 31931000 24891000 32183000 41525000 67966000 36019000 31496000 46828000 22712 621;5050 20739 190817;190818;190819;190820;190821;190822;190823;190824;190825;190826;190827;190828 152044;152045;152046;152047;152048;152049;152050;152051;152052;152053 152049 9 IAWALSR Unmodified 815.46537 0.46537261 2106 Q04760 GLO1 Lactoylglutathione lyase yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 59.929 60.03 2 0.031266 67240 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.975 53.42 150900000 0 0 0 3207600 1861000 1962000 0 1944700 0 3671500 24546000 24605000 1897500 19731000 67473000 22713 2106 20740 190829;190830;190831;190832;190833;190834;190835;190836;190837;190838 152054 152054 1 IAWECPEK Unmodified 1031.4746 0.47461667 4287 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 50.082 43.277 2 0.031271 56268 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.189 54.707 105870000 7299500 98566000 0 0 0 0 0 0 0 0 0 0 0 0 0 22714 4287 20741 190839;190840 152055 152055 1 IAWPPPTELGSSGSALEEGIK Unmodified 2138.0895 0.089549874 4893 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 85.743 85.862 2 0.0027754 99416 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 31.389 18.763 13693000 0 0 0 0 0 2381700 0 0 2675700 4270100 0 4365700 0 0 0 22715 4893 20742 190841;190842;190843;190844;190845 152056;152057;152058 152056 3 IAYQLAVEAESEQK Unmodified 1577.7937 0.7937022 1358 P35606 COPB2 Coatomer subunit beta' yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.27 0.442 11 4 4 9 2 70.189 64.604 2;3 6.1888E-39 79022 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 192.3 174.03 617890000 30231000 568710000 18948000 0 0 0 0 0 0 0 0 0 0 0 0 22716 1358 20743 190846;190847;190848;190849;190850;190851;190852;190853;190854;190855;190856;190857;190858;190859;190860 152059;152060;152061;152062;152063;152064;152065;152066;152067;152068;152069;152070;152071;152072;152073 152072 13 IAYVYPDER Unmodified 1124.5502 0.55022446 3530 Q8WTS6 SETD7 Histone-lysine N-methyltransferase SETD7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 48.437 48.638 2 0.017596 54670 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 55.549 39.887 54595000 0 0 0 0 5622500 0 0 0 11612000 0 20911000 16449000 0 0 0 22717 3530 20744 190861;190862;190863;190864 152074;152075;152076 152075 3 IAYVYPDERTALYGK Unmodified 1757.8988 0.89883598 3530 Q8WTS6 SETD7 Histone-lysine N-methyltransferase SETD7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 4 1 1 2 70.858 65.515 2;3 0.016005 80898 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 39.509 39.509 189640000 35799000 110930000 42916000 0 0 0 0 0 0 0 0 0 0 0 0 22718 3530 20745 190865;190866;190867;190868 152077;152078 152077 2 ICANHYISPDMK Unmodified 1447.6588 0.6588054 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 50.44 44.482 3 0.0047332 61218 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.915 40.19 31448000 24108000 0 7340000 0 0 0 0 0 0 0 0 0 0 0 0 22719 1601 20746 190869;190870 152079 152079 1 ICANHYITPMMELKPNAGSDR Unmodified 2417.129 0.1290054 1480 P43487 RANBP1 Ran-specific GTPase-activating protein yes yes 0 0 1 By MS/MS 10 0 1 1 71.024 71.459 4 1.2719E-05 81587 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.093 53.644 15572000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15572000 22720 1480 20747 190871 152080 152080 1 ICANSQQYQQAVK Unmodified 1536.7355 0.73547582 399 O60437 PPL Periplakin yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 32.781 32.419 2 4.2338E-13 40301 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 156.35 147.39 37638000 0 15054000 0 4635500 1607400 2217200 2241500 0 0 2402500 3160300 0 1643800 1739600 2935900 22721 399 20748 190872;190873;190874;190875;190876;190877;190878;190879;190880;190881 152081;152082;152083;152084 152082 4 ICAVGITK Unmodified 860.47897 0.47897377 1754 P55060 CSE1L Exportin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 35.844 34.745 2 0.0060247 37349 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 104.37 34.976 2195100000 448160000 1366500000 34445000 12469000 11523000 48583000 16515000 12505000 13968000 37780000 34874000 35939000 32051000 33834000 55952000 22722 1754 20749 190882;190883;190884;190885;190886;190887;190888;190889;190890;190891;190892;190893;190894;190895;190896;190897 152085;152086;152087;152088;152089;152090;152091;152092;152093;152094 152090 8 ICAVQEIIEDCMK Unmodified 1607.7357 0.73573509 4983 Q9UL15 BAG5 BAG family molecular chaperone regulator 5 yes yes 0 0 0 By MS/MS 2 0 1 1 90.279 85.383 2 5.0863E-10 106092 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.25 126.38 19937000 0 19937000 0 0 0 0 0 0 0 0 0 0 0 0 0 22723 4983 20750 190898 152095 152095 1 ICDDELILIK Unmodified 1230.653 0.65297497 1067 P17987 TCP1 T-complex protein 1 subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.22 2.2 1 8 1 1 1 1 1 1 1 1 1 79.321 78.895 2 4.1482E-42 91778 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 204.7 151.53 676150000 0 1863100 0 30736000 41345000 126940000 2816000 0 0 0 0 0 70369000 120830000 281240000 22724 1067 20751 190899;190900;190901;190902;190903;190904;190905;190906;190907 152096;152097;152098;152099;152100;152101;152102;152103 152103 8 ICDPYAWLEDPDSEQTK Unmodified 2065.8939 0.89388653 1533 P48147 PREP Prolyl endopeptidase yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 86.489 80.813 2 1.78E-07 103339 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 99.531 96.843 17453000 9665100 7787600 0 0 0 0 0 0 0 0 0 0 0 0 0 22725 1533 20752 190908;190909 152104;152105 152105 2 ICDQISDAVLDAHLQQDPDAK Unmodified 2351.1063 0.10633893 1297 P31153 MAT2A S-adenosylmethionine synthase isoform type-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.33 3.82 7 2 6 1 6 2 1 1 1 1 1 1 76.992 74.411 2;3 1.061E-104 93351 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 179.36 168.59 4115900000 242530000 3560400000 182720000 0 0 0 1868400 0 0 10591000 15073000 21911000 0 12571000 68189000 22726 1297 20753 190910;190911;190912;190913;190914;190915;190916;190917;190918;190919;190920;190921;190922;190923;190924 152106;152107;152108;152109;152110;152111;152112;152113;152114;152115;152116;152117;152118;152119;152120;152121;152122 152110 17 ICDQWDALGSLTHSR Unmodified 1757.8155 0.81551705 356 O43707 ACTN4 Alpha-actinin-4 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 77.241 77.399 3 0.00082195 88565 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 57.794 51.213 78923000 0 0 0 0 0 7139200 0 0 2705000 0 6556800 11043000 0 9010100 42469000 22727 356 20754 190925;190926;190927;190928;190929;190930 152123;152124;152125;152126;152127 152126 5 ICDQWDNLGALTQK Unmodified 1660.7879 0.78790532 971 P12814 ACTN1 Alpha-actinin-1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 79.298 77.795 2 4.0087E-14 90326 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 116.24 101.55 47350000 9857400 0 0 0 0 0 0 0 0 0 0 8996000 2623600 6095900 19777000 22728 971 20755 190931;190932;190933;190934;190935 152128;152129;152130;152131 152128 4 ICDSVGLAK Unmodified 961.49027 0.49026674 4965 Q9UKG1 APPL1 DCC-interacting protein 13-alpha yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 1 1 6 2 1 1 1 1 1 1 35.126 34.174 2 0.013928 43885 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.81 69.305 198800000 0 157380000 0 0 2359600 0 0 0 0 5803200 10549000 11331000 0 4657600 6713200 22729 4965 20756 190936;190937;190938;190939;190940;190941;190942;190943 152132;152133 152132 1 ICDVGVSLPLDENMTVTDPEACYIGTEPWK Unmodified 3408.5564 0.55638033 3905 Q96KB5 PBK Lymphokine-activated killer T-cell-originated protein kinase yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 96.916 92.891 3 6.305E-21 114631 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.512 73.671 48084000 0 48084000 0 0 0 0 0 0 0 0 0 0 0 0 0 22730 3905 20757 190944;190945 152134;152135 152134 2 ICDVGVSLPLDENMTVTDPEACYIGTEPWKPK Unmodified 3633.7041 0.7041072 3905 Q96KB5 PBK Lymphokine-activated killer T-cell-originated protein kinase yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 95.332 91.674 3 5.6229E-10 114098 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 50.704 45.648 25965000 0 20079000 5885600 0 0 0 0 0 0 0 0 0 0 0 0 22731 3905 20758 190946;190947 152136;152137;152138 152136 3 ICDVYNAVMDVVK Unmodified 1524.7316 0.73163599 5231 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 0 0 By MS/MS 2 0 1 1 92.394 87.483 2 0.00079143 108700 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.38 87.72 87648000 0 87648000 0 0 0 0 0 0 0 0 0 0 0 0 0 22732 5231 20759 190948 152139 152139 1 ICEADRVAIK Unmodified 1173.6176 0.61759251 1754 P55060 CSE1L Exportin-2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.33 3.93 6 1 8 2 3 2 1 1 1 1 1 1 1 1 32.573 30.344 2;3 4.9038E-06 42558 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 152.11 89.453 3404100000 175770000 1529500000 1342300000 20905000 22317000 89615000 42853000 31989000 24055000 0 0 0 48643000 76120000 0 22733 1754 20760 190949;190950;190951;190952;190953;190954;190955;190956;190957;190958;190959;190960;190961;190962;190963 152140;152141;152142;152143;152144;152145;152146;152147;152148;152149;152150;152151;152152;152153;152154;152155 152148 13 ICEDSAEILDSDVLDRPLNIMIPK Oxidation (M) 2771.3721 0.37213202 3692 Q92973 TNPO1 Transportin-1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 95.477 90.328 3 6.4894E-19 113690 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.384 91.842 180150000 125020000 45823000 9305800 0 0 0 0 0 0 0 0 0 0 0 0 22734 3692 20761 190964;190965;190966 152156;152157;152158 152157 5256 3 ICEDSAEILDSDVLDRPLNIMIPK Unmodified 2755.3772 0.3772174 3692 Q92973 TNPO1 Transportin-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 2 3 1 97.379 92.896 3 1.3286E-38 115709 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 116.94 110.5 284990000 163470000 116190000 5337500 0 0 0 0 0 0 0 0 0 0 0 0 22735 3692 20761 190967;190968;190969;190970;190971;190972 152159;152160;152161;152162 152161 3 ICEEAFARSK Unmodified 1209.5812 0.58120701 2071 Q02218 OGDH 2-oxoglutarate dehydrogenase, mitochondrial yes yes 0 0 1 By matching By MS/MS 2 0 2 1 1 32.317 28.378 3 0.015785 35781 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 57.836 47.007 19540000 0 8967000 10573000 0 0 0 0 0 0 0 0 0 0 0 0 22736 2071 20762 190973;190974 152163 152163 1 ICEEQEQALQEMGLHLSQSK Unmodified 2357.0991 0.099145057 3998 Q96T51 RUFY1 RUN and FYVE domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 82.779 79.284 3 3.6884E-59 98647 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.3 116.18 134100000 0 130280000 3819700 0 0 0 0 0 0 0 0 0 0 0 0 22737 3998 20763 190975;190976;190977 152164;152165;152166;152167;152168 152164 5 ICEPGYSPTYK Unmodified 1313.5962 0.59618837 849 P07858 CTSB Cathepsin B;Cathepsin B light chain;Cathepsin B heavy chain yes yes 0 0 0 By MS/MS By MS/MS 5 3.56 1 1 1 2 1 44.609 41.033 2 0.0013904 52558 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.247 77.2 54496000 0 33444000 0 21052000 0 0 0 0 0 0 0 0 0 0 0 22738 849 20764 190978;190979;190980 152169;152170;152171 152170 3 ICGDIHGQYTDLLR Unmodified 1659.8039 0.80388973 1873 P62140 PPP1CB Serine/threonine-protein phosphatase PP1-beta catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 67.509 67.866 3 0.017602 77081 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.815 20.53 20133000 0 0 0 0 0 0 0 0 0 0 0 0 0 7548000 12585000 22739 1873 20765 190981;190982 152172 152172 1 ICGLEEDLK Unmodified 1075.522 0.52196079 455 O75116 ROCK2 Rho-associated protein kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 51.43 51.725 2 0.038756 58535 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 63.565 41.605 12290000 0 0 0 0 0 0 0 0 0 0 0 0 12290000 0 0 22740 455 20766 190983;190984;190985;190986 152173;152174;152175;152176 152174 4 ICGVEDAVSEMTRR Unmodified 1621.7552 0.75522498 1972 P78330 PSPH Phosphoserine phosphatase yes yes 0 0 1 By MS/MS 10 0 1 1 66.609 67.127 3 0.00094341 76252 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.509 31.768 10639000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10639000 22741 1972 20767 190987 152177 152177 1 ICLAEDEGLLTTDISIDLK Unmodified 2118.0766 0.076601926 3038 Q7KZ85 SUPT6H Transcription elongation factor SPT6 yes yes 0 0 0 By MS/MS 2 0 1 1 97.383 89.252 3 4.4466E-06 115254 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.035 74.474 8990100 8990100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22742 3038 20768 190988 152178 152178 1 ICLDILK Unmodified 873.49937 0.49937486 1833 P61088 UBE2N Ubiquitin-conjugating enzyme E2 N yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.586 76.681 2 0.01917 88405 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 110.61 41.179 290080000 0 0 0 8048300 0 28620000 17493000 17381000 14200000 36907000 27898000 37825000 24504000 26781000 50418000 22743 1833 20769 190989;190990;190991;190992;190993;190994;190995;190996;190997;190998;190999 152179;152180;152181;152182;152183;152184;152185;152186;152187;152188;152189 152180 11 ICLEIMQR Unmodified 1061.5362 0.53617107 2033 Q00341 HDLBP Vigilin yes yes 0 0 0 By MS/MS 10 0 1 1 69.085 69.551 2 0.017826 79342 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.038 9.0271 4002800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4002800 22744 2033 20770 191000 152190 152190 1 ICLQPPPTSR Unmodified 1167.607 0.60702783 1210 P26640 VARS Valine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 48.125 48.509 2 0.0048357 53356 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 71.379 46.485 83161000 0 0 0 0 0 0 5827000 0 0 8961500 15469000 17310000 6820800 11725000 17048000 22745 1210 20771 191001;191002;191003;191004;191005;191006;191007;191008;191009 152191;152192;152193;152194;152195;152196;152197;152198;152199 152197 9 ICLTDHFK Unmodified 1032.5063 0.50625115 5159 Q9Y3C8 UFC1 Ubiquitin-fold modifier-conjugating enzyme 1 yes yes 0 0 0 By MS/MS 2 0 1 1 56.847 48.667 2 0.02908 66482 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.058 27.699 16891000 16891000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22746 5159 20772 191010 152200;152201 152201 2 ICLVNDPRPQHK Unmodified 1475.7667 0.76671637 2348 Q13867 BLMH Bleomycin hydrolase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 34.387 33.634 3 0.0040849 37327 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 60.255 30.448 188910000 15209000 0 0 117600000 3517400 0 0 0 0 0 12415000 14891000 9718800 0 15564000 22747 2348 20773 191011;191012;191013;191014;191015;191016;191017 152202;152203;152204;152205;152206 152206 4 ICMETGK Unmodified 837.37246 0.37245979 2838 Q63HN8 RNF213 E3 ubiquitin-protein ligase RNF213 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 18.759 14.757 2 0.025533 19234 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.07 59.146 39480000 3589900 35890000 0 0 0 0 0 0 0 0 0 0 0 0 0 22748 2838 20774 191018;191019 152207;152208 152207 2 ICNEILTSPCSPEIR Unmodified 1787.8546 0.85460468 4079 Q9BPX3 NCAPG Condensin complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 70.262 69.909 2 3.9247E-10 87525 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.96 99.303 85342000 0 40726000 0 0 2478700 3308000 3363900 2828700 2090300 4661600 0 7346700 3763500 6222100 8553200 22749 4079 20775 191020;191021;191022;191023;191024;191025;191026;191027;191028;191029;191030 152209;152210;152211;152212;152213;152214;152215;152216;152217;152218;152219;152220 152212 12 ICNEILTSPCSPEIRVYTK Unmodified 2279.129 0.12898862 4079 Q9BPX3 NCAPG Condensin complex subunit 3 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 78.967 73.556 3 1.3913E-13 94768 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.975 74.496 52307000 36824000 0 15483000 0 0 0 0 0 0 0 0 0 0 0 0 22750 4079 20776 191031;191032 152221;152222 152221 2 ICNHPDLFSGGPK Unmodified 1440.682 0.68198369 2097 Q03468 ERCC6 DNA excision repair protein ERCC-6 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 55.494 49.435 3 0.010295 67687 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.28 34.635 18954000 14848000 0 4105900 0 0 0 0 0 0 0 0 0 0 0 0 22751 2097 20777 191033;191034 152223;152224 152223 2 ICNLTEEESSK Unmodified 1308.5867 0.5867459 3024 Q70CQ2 USP34 Ubiquitin carboxyl-terminal hydrolase 34 yes yes 0 0 0 By MS/MS 10 0 1 1 27.441 27.763 2 0.0079706 28422 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 62.823 32.253 37390000 0 0 0 0 0 0 0 0 0 0 0 0 0 37390000 0 22752 3024 20778 191035 152225 152225 1 ICNYVGPAK Unmodified 1020.5063 0.50625115 1096 P19838 NFKB1 Nuclear factor NF-kappa-B p105 subunit;Nuclear factor NF-kappa-B p50 subunit yes yes 0 0 0 By MS/MS 2 0 1 1 31.328 26.876 2 0.036865 34960 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.659 30.723 86555000 0 86555000 0 0 0 0 0 0 0 0 0 0 0 0 0 22753 1096 20779 191036 152226 152226 1 ICPGENQAAEDELRK Unmodified 1728.8101 0.81009732 1739 P54278 PMS2 Mismatch repair endonuclease PMS2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 34.467 34.704 3 2.8468E-05 38337 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 73.834 60.43 169640000 0 0 0 0 7319100 17055000 7584400 14358000 10909000 0 26489000 36819000 0 16806000 32304000 22754 1739 20780 191037;191038;191039;191040;191041;191042;191043;191044;191045;191046 152227;152228;152229;152230;152231;152232;152233;152234;152235;152236;152237 152237 10 ICPVEFNPNFVAR Unmodified 1561.7711 0.77113304 4920 Q9UI30 TRMT112 Multifunctional methyltransferase subunit TRM112-like protein yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 2 1 2 1 1 1 1 1 1 80.819 80.966 2 1.6566E-09 93427 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 135.43 97.125 238950000 0 0 0 0 0 22886000 1840600 3299500 18771000 34924000 29809000 53632000 27053000 0 46739000 22755 4920 20781 191047;191048;191049;191050;191051;191052;191053;191054;191055;191056;191057;191058 152238;152239;152240;152241;152242;152243;152244;152245;152246;152247 152243 10 ICQVQGK Unmodified 831.42727 0.42727255 2748;2888 Q6IN85;Q5MIZ7 SMEK1;SMEK2 Serine/threonine-protein phosphatase 4 regulatory subunit 3A;Serine/threonine-protein phosphatase 4 regulatory subunit 3B no no 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 8.5069 5.0637 2 0.031292 7404 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.903 40.234 135620000 10076000 125540000 0 0 0 0 0 0 0 0 0 0 0 0 0 22756 2888;2748 20782 191059;191060 152248;152249;152250 152248 3 ICRDPQTPVLQTK Unmodified 1554.8188 0.81881152 5009 Q9ULW0 TPX2 Targeting protein for Xklp2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.265 37.445 3 0.028931 41423 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 42.317 36.602 132320000 0 0 0 6717700 8567000 8490200 8196600 8218600 12037000 9009400 10996000 21060000 12249000 10940000 15842000 22757 5009 20783 191061;191062;191063;191064;191065;191066;191067;191068;191069;191070;191071;191072 152251;152252;152253 152252 1 ICREMYDDGVGLPFQSQPDLIGDK Unmodified 2752.2837 0.28365136 405 O60502 MGEA5 Protein O-GlcNAcase yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 87.938 84.286 3 0.014344 101787 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 26.005 12.55 26980000 0 24409000 2571800 0 0 0 0 0 0 0 0 0 0 0 0 22758 405 20784 191073;191074 152254;152255 152255 2 ICSEDIECSGLTIPK Unmodified 1720.8012 0.80117212 2346 Q13835 PKP1 Plakophilin-1 yes yes 0 0 0 By MS/MS 10 0 1 1 73.427 72.851 2 0.016218 84379 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 34.773 20.083 28412000 0 0 0 28412000 0 0 0 0 0 0 0 0 0 0 0 22759 2346 20785 191075 152256 152256 1 ICSIALVGK Unmodified 959.54739 0.54738768 4598 Q9NRF8 CTPS2 CTP synthase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 61.667 55.681 2 0.0079196 75298 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 108.46 83.011 157370000 92606000 60201000 4558200 0 0 0 0 0 0 0 0 0 0 0 0 22760 4598 20786 191076;191077;191078 152257 152257 0 ICSIYTQSGENSLVQEGSEASPIGK Unmodified 2653.2541 0.25412537 5211 Q9Y4W2 LAS1L Ribosomal biogenesis protein LAS1L yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 76.206 76.304 3 2.0033E-12 87645 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.373 51.724 88285000 0 0 0 0 6453100 5809800 6284800 6909200 6001000 8771300 0 12450000 9786800 9815400 16003000 22761 5211 20787 191079;191080;191081;191082;191083;191084;191085;191086;191087;191088 152258;152259;152260;152261;152262;152263;152264;152265 152260 8 ICSKPVVLPK Unmodified 1139.6737 0.67365083 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 38.274 38.522 3 0.011197 41723 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 41.54 17.308 94796000 0 0 0 0 6274700 3138000 8995000 0 2332200 7746400 7603700 13219000 12015000 14306000 19166000 22762 1986 20788 191089;191090;191091;191092;191093;191094;191095;191096;191097;191098 152266;152267;152268;152269 152267 4 ICSLNLPSEESTR Unmodified 1504.7192 0.71915705 5263 Q9Y620 RAD54B DNA repair and recombination protein RAD54B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 58.316 58.5 2 0.00092315 67029 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 80.763 62.429 35539000 0 0 0 0 3610500 3303000 5844500 5205100 3004400 3365700 4353300 3763700 0 0 3088500 22763 5263 20789 191099;191100;191101;191102;191103;191104;191105;191106;191107 152270;152271;152272;152273;152274;152275;152276;152277 152277 8 ICSLQEEQQQLR Unmodified 1530.746 0.7460405 3998 Q96T51 RUFY1 RUN and FYVE domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 19.116 19.141 3 0.038581 19569 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 23.226 0 39532000 0 0 0 6242300 6002600 6560100 4147600 0 4560300 8243300 0 0 0 3776000 0 22764 3998 20790 191108;191109;191110;191111;191112;191113;191114 152278 152278 1 ICSMYDNLR Unmodified 1170.5162 0.51616391 3133 Q86TB9 PATL1 Protein PAT1 homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 48.545 48.714 2 0.0051666 54854 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 81.548 46.74 97204000 0 0 0 5542300 5166300 0 3265400 4690900 6493900 7880300 11095000 19698000 11654000 11431000 10286000 22765 3133 20791 191115;191116;191117;191118;191119;191120;191121;191122;191123;191124;191125 152279;152280;152281;152282;152283;152284;152285;152286;152287 152284 9 ICSMYDNLR Oxidation (M) 1186.5111 0.51107853 3133 Q86TB9 PATL1 Protein PAT1 homolog 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 34.882 35.343 2 0.017065 38920 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 50.04 32.655 30394000 0 0 0 0 0 0 0 0 0 0 0 13882000 7840100 8671100 0 22766 3133 20791 191126;191127;191128 152288 152288 4751 1 ICTGQVPSAEDEPAPK Unmodified 1697.7931 0.79305028 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 42.497 42.818 2 0.019441 48081 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 31.639 16.667 13578000 0 0 0 0 0 0 0 0 0 3155000 5759900 0 4662700 0 0 22767 4139 20792 191129;191130;191131 152289 152289 1 ICVVGENGAGK Unmodified 1102.5441 0.54409322 4653 Q9NUQ8 ABCF3 ATP-binding cassette sub-family F member 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 28.621 28.903 2 5.7675E-05 31622 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 114.39 74.118 55975000 0 0 0 0 8413000 0 6589400 0 0 9768500 9229600 8368400 0 5055700 8550400 22768 4653 20793 191132;191133;191134;191135;191136;191137;191138;191139;191140;191141;191142 152290;152291;152292;152293;152294;152295;152296;152297;152298;152299;152300;152301 152301 12 ICYAINLGK Unmodified 1050.5532 0.55320134 3429 Q8NEU8 APPL2 DCC-interacting protein 13-beta yes yes 0 0 0 By MS/MS 2 0 1 1 71.341 63.075 2 0.028276 83977 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.081 38.999 5540700 5540700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22769 3429 20794 191143 152302 152302 1 IDAAYFETSK Unmodified 1143.5448 0.54480473 3787 Q96CW5 TUBGCP3 Gamma-tubulin complex component 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 53.157 53.345 2 0.019625 59104 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.706 15.096 126940000 0 0 0 0 8229000 14626000 14936000 14167000 0 24162000 0 22071000 0 13304000 15445000 22770 3787 20795 191144;191145;191146;191147;191148;191149;191150;191151 152303;152304;152305 152304 3 IDAGTMAEPSASPSK Oxidation (M) 1476.6766 0.67662354 3264 Q8IXQ3 C9orf40 Uncharacterized protein C9orf40 yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 24.334 24.656 2 0.011799 26146 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 48.741 32.517 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22771 3264 20796 191152;191153 152306;152307 152306 4878 2 IDALLAVDPPR Unmodified 1178.6659 0.66592292 1616 P50219 MNX1 Motor neuron and pancreas homeobox protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 76.254 76.284 2 0.0010376 88003 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 75.509 56.531 32404000 0 0 0 1893200 2406600 0 0 3885000 0 5164900 3602100 6170800 3376000 0 5905800 22772 1616 20797 191154;191155;191156;191157;191158;191159;191160;191161;191162;191163 152308;152309;152310;152311;152312;152313;152314;152315 152311 8 IDALNENK Unmodified 915.46616 0.46616048 63 CON__P02754 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 19.805 19.88 2 0.0064947 20483 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 100.39 60.292 + 281120000 0 0 0 0 25560000 37972000 178550000 0 11635000 0 27396000 0 0 0 0 22773 63 20798 191164;191165;191166;191167;191168 152316;152317;152318;152319 152316 3 IDAMHGVVGPYVK Unmodified 1384.7173 0.71730656 1380 P36871 PGM1 Phosphoglucomutase-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 61.129 61.508 3 0.0023384 69350 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.712 24.036 30385000 0 0 0 0 0 0 0 0 0 0 5887900 0 0 3122500 21374000 22774 1380 20799 191169;191170;191171 152320 152320 1 IDASELSFPFHESILK Unmodified 1831.9356 0.93561541 1446 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 4 2 12 3 3 1 1 1 1 1 1 1 1 1 1 1 1 89.916 88.146 3;4 1.3818E-07 111377 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.38 80.86 258380000 68014000 89068000 0 1131900 1159700 4494800 1361100 6362900 5032900 15979000 6415100 5539900 1380800 4013800 48423000 22775 1446 20800 191172;191173;191174;191175;191176;191177;191178;191179;191180;191181;191182;191183;191184;191185;191186;191187;191188;191189 152321;152322;152323;152324;152325;152326;152327;152328;152329;152330 152323 8 IDASKNEEDEGHSNSSPR Unmodified 1970.8566 0.85658982 2365 Q14103 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 17 1 2 1 2 2 2 2 2 1 2 7.8787 8.0429 3;4 5.9819E-33 5567 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 122.01 112.48 208210000 0 0 0 2943600 6914800 0 0 6485800 5862700 11430000 66294000 45573000 24270000 9452900 28985000 22776 2365 20801 191190;191191;191192;191193;191194;191195;191196;191197;191198;191199;191200;191201;191202;191203;191204;191205;191206 152331;152332;152333;152334;152335;152336;152337;152338;152339;152340 152334 7 IDASQTEFEK Unmodified 1166.5455 0.54553301 614 O94979 SEC31A Protein transport protein Sec31A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.384 34.569 2 0.00092213 36993 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 113.62 51.623 134950000 0 0 0 4918900 4830100 19582000 7089500 0 10296000 13434000 19368000 10545000 8815800 10373000 25698000 22777 614 20802 191207;191208;191209;191210;191211;191212;191213;191214;191215;191216;191217;191218 152341;152342;152343;152344;152345;152346;152347;152348;152349;152350;152351;152352;152353 152349 12 IDATQVEVNPFGETPEGQVVCFDAK Unmodified 2749.2905 0.29051088 3875 Q96I99 SUCLG2 Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial yes yes 0 0 0 By MS/MS 3 0 1 1 89.684 86.473 3 0.013696 103661 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 23.79 21.141 3707500 0 3707500 0 0 0 0 0 0 0 0 0 0 0 0 0 22778 3875 20803 191219 152354;152355 152355 2 IDATSASVLASR Unmodified 1189.6303 0.63026569 982 P13667 PDIA4 Protein disulfide-isomerase A4 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 50.692 50.844 2 4.0312E-54 58378 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 187.99 143.6 878630000 0 0 0 45863000 45088000 35521000 55025000 62340000 32460000 62163000 122750000 97609000 70659000 60194000 188960000 22779 982 20804 191220;191221;191222;191223;191224;191225;191226;191227;191228;191229;191230;191231 152356;152357;152358;152359;152360;152361;152362;152363;152364;152365;152366;152367;152368;152369;152370;152371;152372;152373;152374;152375 152375 20 IDATSASVLASRFDVSGYPTIK Unmodified 2297.1903 0.19032655 982 P13667 PDIA4 Protein disulfide-isomerase A4 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 89.761 85.708 3 0.0012947 106836 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 37.209 22.439 23462000 0 23462000 0 0 0 0 0 0 0 0 0 0 0 0 0 22780 982 20805 191232;191233 152376;152377 152376 2 IDCDNLEQYFIQQGGGPDK Unmodified 2195.9793 0.9793475 3608 Q92499 DDX1 ATP-dependent RNA helicase DDX1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 85.706 82.214 3 3.3462E-68 101715 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.57 114.16 230070000 0 225170000 4893800 0 0 0 0 0 0 0 0 0 0 0 0 22781 3608 20806 191234;191235;191236 152378;152379;152380;152381 152378 4 IDCDNLEQYFIQQGGGPDKK Unmodified 2324.0743 0.074310515 3608 Q92499 DDX1 ATP-dependent RNA helicase DDX1 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 82.579 79.085 3 6.5426E-10 98351 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.945 76.282 51791000 0 47335000 4456100 0 0 0 0 0 0 0 0 0 0 0 0 22782 3608 20807 191237;191238;191239 152382;152383;152384;152385;152386 152383 5 IDCNLLEFK Unmodified 1150.5692 0.56924534 1122 P21283 ATP6V1C1 V-type proton ATPase subunit C 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 77.323 76.189 2 0.0013866 96489 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 137.14 80.088 571820000 21704000 445510000 9108600 3095400 3316900 7650200 5881700 4495000 4193100 10128000 9062900 11508000 6246000 9456800 20460000 22783 1122 20808 191240;191241;191242;191243;191244;191245;191246;191247;191248;191249;191250;191251;191252;191253;191254;191255 152387;152388;152389;152390;152391;152392;152393 152390 7 IDDFPNELEK Unmodified 1218.5768 0.57683314 4617 Q9NRZ9 HELLS Lymphoid-specific helicase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 60.777 60.105 2 8.9396E-06 75689 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 152.11 131.21 284860000 0 111890000 0 9140200 10278000 13744000 12038000 10039000 10053000 17255000 18117000 22034000 15836000 12415000 22021000 22784 4617 20809 191256;191257;191258;191259;191260;191261;191262;191263;191264;191265;191266;191267;191268;191269 152394;152395;152396;152397;152398;152399;152400;152401;152402;152403;152404;152405;152406;152407 152397 10 IDDIADGAVKPPPNK Unmodified 1548.8148 0.814772 3102 Q7Z4V5 HDGFRP2 Hepatoma-derived growth factor-related protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 43.839 43.814 3 0.00012111 49738 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 78.814 58.718 119030000 0 0 0 10465000 9797400 18297000 15403000 20147000 13393000 0 31531000 0 0 0 0 22785 3102 20810 191270;191271;191272;191273;191274;191275;191276 152408;152409;152410;152411;152412;152413;152414;152415;152416;152417 152416 9 IDDIFER Unmodified 906.4447 0.44469675 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 55.043 55.213 2 0.023384 62053 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 88.029 55.915 180610000 0 0 0 8997500 0 19001000 11640000 9657900 10878000 18701000 0 25063000 17831000 20327000 38510000 22786 2047 20811 191277;191278;191279;191280;191281;191282;191283;191284;191285;191286 152418;152419;152420;152421;152422;152423 152423 6 IDDIRKPGESEE Unmodified 1386.6627 0.66268803 1548 P48643 CCT5 T-complex protein 1 subunit epsilon yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.1 3.37 6 1 22 2 3 2 2 2 2 2 2 2 2 2 2 1 1 2 23.095 22.415 2;3 1.385E-16 27373 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 175.49 156.4 4502300000 185530000 1550500000 144470000 113310000 87692000 285410000 137820000 153660000 105920000 262490000 380870000 341280000 136380000 220580000 396400000 22787 1548 20812 191287;191288;191289;191290;191291;191292;191293;191294;191295;191296;191297;191298;191299;191300;191301;191302;191303;191304;191305;191306;191307;191308;191309;191310;191311;191312;191313;191314;191315 152424;152425;152426;152427;152428;152429;152430;152431;152432;152433;152434;152435;152436 152431 5 IDDIVSGHK Unmodified 982.50836 0.50835964 1570 P49368 CCT3 T-complex protein 1 subunit gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.668 21.873 2 0.0020722 22230 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 128.69 58.419 1324700000 0 0 0 45791000 46089000 96327000 87507000 53487000 56138000 119800000 142180000 222740000 132130000 99700000 222800000 22788 1570 20813 191316;191317;191318;191319;191320;191321;191322;191323;191324;191325;191326;191327 152437;152438;152439;152440;152441;152442;152443;152444;152445;152446;152447;152448;152449;152450 152442 10 IDDMTAAPMDVR 2 Oxidation (M) 1365.5905 0.59045107 1030 P15927 RPA2 Replication protein A 32 kDa subunit yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 29.946 30.242 2 0.00077035 32548 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 63.283 53.051 64610000 0 0 0 4799000 0 8717500 0 0 0 8282500 7361200 11783000 8396300 6887600 8383000 22789 1030 20814 191328;191329;191330;191331;191332;191333;191334;191335 152451;152452;152453;152454;152455;152456;152457;152458 152456 1452;1453 7 IDDMTAAPMDVR Oxidation (M) 1349.5955 0.59553644 1030 P15927 RPA2 Replication protein A 32 kDa subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 44.172 44.171 2 0.0034831 49660 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 54.784 37.348 29054000 0 0 0 0 3346400 10021000 0 0 0 0 15686000 0 0 0 0 22790 1030 20814 191336;191337;191338;191339 152459;152460;152461;152462 152459 1452;1453 4 IDDMTAAPMDVR Unmodified 1333.6006 0.60062182 1030 P15927 RPA2 Replication protein A 32 kDa subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 57.473 57.582 2 0.00076405 65560 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 74.841 64.753 119070000 0 0 0 3579700 4621000 16045000 7129000 0 0 16918000 11844000 15544000 9408800 9517000 24468000 22791 1030 20814 191340;191341;191342;191343;191344;191345;191346;191347;191348;191349;191350 152463;152464;152465;152466;152467;152468;152469;152470 152463 8 IDDPTDSKPEDWDKPEHIPDPDAK Unmodified 2759.2562 0.25623386 1225 P27797 CALR Calreticulin yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.33 3.91 19 4 26 10 8 5 2 3 1 1 2 2 3 3 2 3 4 61.452 59.41 3;4;5 2.8518E-54 67250 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 113.51 109.51 4970800000 2710100000 948060000 410540000 31306000 18841000 23530000 0 13412000 30734000 38117000 79004000 111880000 43615000 67026000 444620000 22792 1225 20815 191351;191352;191353;191354;191355;191356;191357;191358;191359;191360;191361;191362;191363;191364;191365;191366;191367;191368;191369;191370;191371;191372;191373;191374;191375;191376;191377;191378;191379;191380;191381;191382;191383;191384;191385;191386;191387;191388;191389;191390;191391;191392;191393;191394;191395;191396;191397;191398;191399 152471;152472;152473;152474;152475;152476;152477;152478;152479;152480;152481;152482;152483;152484;152485;152486;152487;152488;152489;152490;152491;152492;152493;152494;152495;152496;152497;152498;152499;152500;152501;152502;152503;152504;152505;152506;152507;152508 152480 34 IDDTIRYLSLHDNK Unmodified 1701.8686 0.86859848 2984 Q6UXN9 WDR82 WD repeat-containing protein 82 yes yes 0 0 1 By MS/MS 2 0 1 1 71.171 62.905 3 0.017349 83692 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.088 36.969 9197400 9197400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22793 2984 20816 191400 152509 152509 0 IDDVVNTR Unmodified 930.47706 0.47705951 1642 P50991 CCT4 T-complex protein 1 subunit delta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.69 3.47 2 2 9 2 2 1 1 1 1 1 1 1 1 1 26.881 25.615 2 0.003081 27892 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 147.52 84.804 9574400000 369060000 7190300000 0 119990000 0 0 0 147500000 154530000 240620000 242520000 273510000 208880000 248720000 378830000 22794 1642 20817 191401;191402;191403;191404;191405;191406;191407;191408;191409;191410;191411;191412;191413 152510;152511;152512;152513;152514;152515;152516;152517;152518;152519;152520;152521;152522;152523;152524;152525 152510 13 IDEAESLNDEELEEK Unmodified 1761.7792 0.77923393 389 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 52.752 52.787 2 3.9191E-19 59693 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 134.99 120.02 88259000 0 0 0 10827000 9966200 10832000 10904000 8382900 6027900 7954900 9193000 0 7188800 6982200 0 22795 389 20818 191414;191415;191416;191417;191418;191419;191420;191421;191422;191423 152526;152527;152528;152529;152530;152531;152532;152533;152534;152535;152536 152527 11 IDEARQELHR Unmodified 1265.6476 0.64764709 1897 P62330 ARF6 ADP-ribosylation factor 6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.717 14.884 3 0.0041013 13948 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 57.149 29.235 182750000 0 0 0 14230000 6895600 14854000 9410200 11073000 7489200 16160000 25641000 14195000 17829000 13376000 31593000 22796 1897 20819 191424;191425;191426;191427;191428;191429;191430;191431;191432;191433;191434;191435 152537;152538;152539;152540;152541;152542;152543;152544;152545;152546;152547;152548;152549 152542 13 IDEELTGK Unmodified 903.45493 0.45492709 4200 Q9BW27 NUP85 Nuclear pore complex protein Nup85 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 24.59 24.819 2 0.01042 24920 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.713 29.688 54378000 0 0 0 6414300 0 9596400 9240400 0 0 0 0 12994000 0 0 16133000 22797 4200 20820 191436;191437;191438;191439;191440 152550;152551 152550 2 IDEELVTNSGK Unmodified 1203.5983 0.59829686 4617 Q9NRZ9 HELLS Lymphoid-specific helicase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 38.186 37.866 2 2.1424E-06 46714 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145.9 77.923 186030000 0 41645000 0 8986600 12694000 21261000 16839000 15816000 13453000 12981000 11076000 21599000 0 0 9680400 22798 4617 20821 191441;191442;191443;191444;191445;191446;191447;191448;191449;191450;191451 152552;152553;152554;152555;152556;152557;152558 152553 6 IDEKPETFESLVAK Unmodified 1604.8298 0.82975336 4215 Q9BWU0 SLC4A1AP Kanadaptin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.18 3.74 3 1 7 1 2 1 1 1 1 1 1 1 1 70.578 68.894 3 0.00039563 87918 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.282 80.541 589130000 23761000 445820000 12131000 0 0 9923000 18307000 0 9252000 17794000 1257300 20583000 0 0 30304000 22799 4215 20822 191452;191453;191454;191455;191456;191457;191458;191459;191460;191461;191462 152559;152560;152561;152562;152563 152559 4 IDELEPR Unmodified 870.4447 0.44469675 2441 Q14697 GANAB Neutral alpha-glucosidase AB yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 29.222 29.428 2 0.023435 31276 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 85.265 47.619 123510000 0 0 0 5673800 4685000 6091600 0 7162300 6293700 12386000 14757000 14502000 8584900 13282000 30090000 22800 2441 20823 191463;191464;191465;191466;191467;191468;191469;191470;191471;191472;191473 152564;152565;152566;152567;152568;152569;152570;152571 152566 8 IDELGNLVSPHATGIR Unmodified 1690.9002 0.90023296 457 O75128 COBL Protein cordon-bleu yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 72.74 73.003 3 6.9022E-05 84602 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 67.605 58.318 38780000 0 0 0 0 0 0 0 0 0 0 0 0 0 14550000 24230000 22801 457 20824 191474;191475;191476 152572;152573 152573 2 IDELQVVK Unmodified 942.5386 0.53859714 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.457 48.617 2 0.028761 54684 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 56.547 9.5528 141460000 0 0 0 7878000 7562200 12577000 9482700 7580400 10971000 14036000 5305300 15028000 15763000 13604000 21677000 22802 619 20825 191477;191478;191479;191480;191481;191482;191483;191484;191485;191486;191487;191488 152574;152575 152575 1 IDELRLFPPDDSPLPVSSR Unmodified 2152.1164 0.11643333 2115 Q05519 SRSF11 Serine/arginine-rich splicing factor 11 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 86.24 86.398 3 1.3444E-05 100086 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 52.612 39.2 18948000 0 0 0 0 0 0 0 0 0 0 3759300 0 0 2718500 12470000 22803 2115 20826 191489;191490;191491;191492 152576;152577;152578;152579 152576 4 IDEMPEAAVK Unmodified 1101.5376 0.53761086 1674 P51858 HDGF Hepatoma-derived growth factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.235 43.41 2 0.0014968 47317 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.709 63.579 749990000 0 0 0 39039000 24444000 22322000 17654000 35486000 13891000 39270000 129080000 85077000 36661000 79884000 227190000 22804 1674 20827 191493;191494;191495;191496;191497;191498;191499;191500;191501;191502;191503;191504 152580;152581;152582;152583;152584;152585;152586;152587;152588;152589;152590;152591;152592;152593;152594;152595 152584 15 IDEMPEAAVK Oxidation (M) 1117.5325 0.53252548 1674 P51858 HDGF Hepatoma-derived growth factor yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 1 1 1 1 1 1 2 2 1 2 2 29.103 29.383 2 0.0026308 31973 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 74.464 39.657 442930000 0 0 0 13427000 8292300 5446000 9213200 11786000 8606900 13888000 103930000 77866000 13745000 53615000 123120000 22805 1674 20827 191505;191506;191507;191508;191509;191510;191511;191512;191513;191514;191515;191516;191517;191518;191519;191520 152596;152597;152598;152599;152600;152601;152602;152603;152604;152605;152606;152607;152608;152609;152610 152607 2686 14 IDENASSEQR Unmodified 1147.5105 0.51054449 3915 Q96L91 EP400 E1A-binding protein p400 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 7.9494 8.1407 2 0.0023779 6192 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 84.213 68.831 12121000 0 0 0 0 0 0 0 3885200 0 2961400 0 0 2445500 2828800 0 22806 3915 20828 191521;191522;191523;191524;191525 152611;152612;152613;152614;152615;152616 152611 5 IDENENNGVLK Unmodified 1243.6044 0.60444487 2791 Q5TAQ9 DCAF8 DDB1- and CUL4-associated factor 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 28.384 28.21 2 0.00030673 30202 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 110.87 55.89 92789000 0 44844000 0 0 1905500 3656300 3442400 2030500 0 3698400 7421300 5775100 4167000 4601200 11248000 22807 2791 20829 191526;191527;191528;191529;191530;191531;191532;191533;191534;191535;191536 152617;152618;152619;152620;152621;152622;152623;152624;152625;152626 152625 10 IDEPGLR Unmodified 798.42357 0.42356738 972 P12955 PEPD Xaa-Pro dipeptidase yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 30.051 30.368 2 0.025135 32569 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 81.381 9.3605 66259000 0 0 0 12404000 0 0 0 5952600 0 0 0 14386000 0 8768300 24748000 22808 972 20830 191537;191538;191539;191540;191541 152627 152627 1 IDEPLEGSEDR Unmodified 1258.5677 0.56772501 1868 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.18 35.362 2 2.1126E-15 39167 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 161.17 96.136 1560300000 0 0 0 72691000 47717000 147670000 110520000 70813000 57476000 159510000 153920000 166500000 123760000 139580000 310200000 22809 1868 20831 191542;191543;191544;191545;191546;191547;191548;191549;191550;191551;191552;191553 152628;152629;152630;152631;152632;152633;152634;152635;152636;152637;152638;152639;152640;152641;152642;152643 152629 16 IDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVK Unmodified 3828.9381 0.93814119 1868 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 95.83 91.155 3 8.0153E-167 114236 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 159.42 150.58 88679000 49811000 28650000 10217000 0 0 0 0 0 0 0 0 0 0 0 0 22810 1868 20832 191554;191555;191556;191557 152644;152645;152646;152647;152648 152647 5 IDEPSTPYHSMMGDDEDACSDTEATEAMAPDILARK 3 Oxidation (M) 4016.6544 0.65439241 1437 P41236 PPP1R2 Protein phosphatase inhibitor 2 yes yes 0 3 1 By MS/MS 2 0 1 1 73.846 65.65 4 8.7108E-25 86938 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.829 61.426 9302700 9302700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22811 1437 20833 191558 152649 152649 2258;2259;2260 1 IDEPSTPYHSMMGDDEDACSDTEATEAMAPDILARK Oxidation (M) 3984.6646 0.66456316 1437 P41236 PPP1R2 Protein phosphatase inhibitor 2 yes yes 0 1 1 By MS/MS By MS/MS 2 0 3 2 1 79.788 73.492 4 1.0612E-50 94704 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.683 87.668 38782000 31505000 0 7277400 0 0 0 0 0 0 0 0 0 0 0 0 22812 1437 20833 191559;191560;191561 152650;152651;152652 152650 2258;2259;2260 3 IDEPTSNMDIFPTVAK Unmodified 1776.8604 0.86040156 874 P08842 STS Steryl-sulfatase yes yes 0 0 0 By MS/MS 10 0 1 1 82.262 81.856 2 0.00030591 95055 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 67.456 48.711 2344100 0 0 0 2344100 0 0 0 0 0 0 0 0 0 0 0 22813 874 20834 191562 152653 152653 1 IDESSLTGESDHVK Unmodified 1515.7053 0.70528113 1098 P20020;P23634 ATP2B1;ATP2B4 Plasma membrane calcium-transporting ATPase 1;Plasma membrane calcium-transporting ATPase 4 yes no 0 0 0 By MS/MS 3 0 1 1 41.637 36.899 3 0.0096591 46017 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 28.986 16.19 2589800 0 2589800 0 0 0 0 0 0 0 0 0 0 0 0 0 22814 1098 20835 191563 152654 152654 1 IDETLTIK Unmodified 931.52261 0.52261272 3018 Q6ZV73 FGD6 FYVE, RhoGEF and PH domain-containing protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 63.146 63.198 2 6.193E-12 72922 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 166.17 90.135 190760000 0 0 0 17025000 9849300 13396000 8682400 15234000 8649700 21619000 24019000 36022000 19209000 17058000 0 22815 3018 20836 191564;191565;191566;191567;191568;191569;191570;191571;191572;191573;191574 152655;152656;152657;152658 152657 4 IDEVPSRAELIQYQK Unmodified 1787.9418 0.94176342 2712 Q567U6 CCDC93 Coiled-coil domain-containing protein 93 yes yes 0 0 1 By MS/MS 2 0 1 1 65.037 61.281 3 0.0099398 75938 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 46.746 34.254 11110000 0 0 11110000 0 0 0 0 0 0 0 0 0 0 0 0 22816 2712 20837 191575 152659 152659 1 IDEVVSR Unmodified 816.43413 0.43413207 2939 Q6P6C2 ALKBH5 RNA demethylase ALKBH5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 20.942 21.166 2 0.023409 20751 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.9 15.866 46775000 0 0 0 6680800 0 6040700 4492500 4035800 0 0 7561700 0 6365900 4425500 7172300 22817 2939 20838 191576;191577;191578;191579;191580;191581;191582;191583 152660 152660 1 IDFADTVTK Unmodified 1008.5128 0.51277632 2215 Q12965 MYO1E Unconventional myosin-Ie yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 54.089 53.232 2 0.0037017 60831 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 101.64 56.951 1241400000 0 791100000 11597000 27138000 30011000 32352000 27499000 23212000 27472000 33171000 48893000 54587000 37685000 38597000 58089000 22818 2215 20839 191584;191585;191586;191587;191588;191589;191590;191591;191592;191593;191594;191595;191596;191597;191598 152661;152662;152663;152664;152665;152666;152667;152668;152669;152670;152671;152672;152673;152674;152675;152676 152664 15 IDFDSVSSIMASSQ Oxidation (M) 1501.6606 0.66063912 4851 Q9UBQ5 EIF3K Eukaryotic translation initiation factor 3 subunit K yes yes 0 1 0 By MS/MS 1 0 1 1 103.67 108.94 2 0.0014295 89066 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 84.817 79.277 13805000 13805000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22819 4851 20840 191599 152677 152677 6213 1 IDFDSVSSIMASSQ Unmodified 1485.6657 0.6657245 4851 Q9UBQ5 EIF3K Eukaryotic translation initiation factor 3 subunit K yes yes 0 0 0 By MS/MS 1 0 1 1 104.86 110.12 2 3.1384E-09 90475 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 139.43 128.6 61647000 61647000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22820 4851 20840 191600 152678 152678 1 IDFEDVIAEPEGTHSFDGIWK Unmodified 2404.1223 0.12230657 2090 Q03135 CAV1 Caveolin-1 yes yes 0 0 0 By MS/MS 2 0 1 1 96.511 88.381 3 0.010919 114248 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 26.915 17.353 9571100 9571100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22821 2090 20841 191601 152679 152679 1 IDFGEAAR Unmodified 877.42938 0.42938104 872 P08754 GNAI3 Guanine nucleotide-binding protein G(k) subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 40.192 40.36 2 0.028474 43935 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.721 16.618 62111000 0 0 0 5177400 6831700 4556100 3805800 3725900 0 0 8486900 11757000 0 9277400 8492700 22822 872 20842 191602;191603;191604;191605;191606;191607;191608;191609;191610 152680 152680 1 IDFGTHISGR Unmodified 1101.5567 0.55670682 1631 P50579 METAP2 Methionine aminopeptidase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 45.165 45.218 2 0.0034015 49469 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 105.52 66.729 5445600 0 0 0 0 0 5445600 0 0 0 0 0 0 0 0 0 22823 1631 20843 191611;191612;191613;191614;191615;191616 152681;152682;152683;152684;152685;152686 152683 6 IDFNDFIK Unmodified 1010.5073 0.50729701 3453 Q8NG31 CASC5 Protein CASC5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 83.331 82.819 2 0.025292 95522 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.815 17.313 52838000 0 19029000 1286500 825650 1753600 2060500 0 2115000 1476000 2487800 3494300 2779400 3957400 4687300 6884900 22824 3453 20844 191617;191618;191619;191620;191621;191622;191623;191624;191625;191626;191627;191628;191629 152687;152688;152689 152688 3 IDFSSIAVPGTSSPR Unmodified 1532.7835 0.78347187 2796 Q5TDH0 DDI2 Protein DDI1 homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.935 79.983 2 7.2892E-05 91643 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 74.76 42.506 87845000 0 0 0 2943600 2386600 7921200 5698000 5397100 0 10832000 9598900 10998000 5866300 6506600 19697000 22825 2796 20845 191630;191631;191632;191633;191634;191635;191636;191637;191638;191639;191640 152690;152691;152692;152693;152694;152695;152696;152697;152698;152699 152695 10 IDFVAHDDIPYSSAGSDDVYK Unmodified 2313.0437 0.043721893 1577 P49585 PCYT1A Choline-phosphate cytidylyltransferase A no no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 75.646 75.764 3 0.00058279 87032 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.057 34.454 48294000 0 0 0 0 3943300 0 0 7566200 0 0 11014000 12958000 0 0 12813000 22826 1577 20846 191641;191642;191643;191644;191645 152700 152700 1 IDFVGELNDK Unmodified 1148.5714 0.57135383 1771 P55786;A6NEC2 NPEPPS;NPEPPSL1 Puromycin-sensitive aminopeptidase;Puromycin-sensitive aminopeptidase-like protein yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 71.1 69.811 2 7.0827E-06 87784 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 143.03 69.786 2104900000 98150000 1836500000 25860000 14339000 3138900 2736800 4397100 4263900 0 5370200 18481000 18541000 5356300 11577000 56177000 22827 1771 20847 191646;191647;191648;191649;191650;191651;191652;191653;191654;191655;191656;191657;191658;191659;191660 152701;152702;152703;152704;152705;152706;152707;152708;152709;152710;152711;152712;152713 152703 12 IDGATQSSPAEPK Unmodified 1299.6307 0.63065962 2661 Q32MZ4 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19.931 19.488 2 0.0020866 24957 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.706 61.93 271990000 16500000 26602000 0 11858000 10954000 11723000 14864000 12133000 9998600 18111000 25399000 37539000 17975000 19439000 38892000 22828 2661 20848 191661;191662;191663;191664;191665;191666;191667;191668;191669;191670;191671;191672;191673;191674 152714;152715;152716;152717;152718 152716 4 IDGGITGNMR Oxidation (M) 1048.4971 0.49714303 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 20.262 20.514 2 0.0052543 21428 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 61.161 27.899 153360000 0 0 0 13799000 0 13162000 16463000 9384000 16562000 0 19083000 21232000 18455000 13037000 12184000 22829 2451 20849 191675;191676;191677;191678;191679;191680;191681;191682;191683;191684 152719;152720;152721;152722;152723;152724;152725 152725 4023 5 IDGGITGNMR Unmodified 1032.5022 0.50222841 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 34.845 35.065 2 0.0015063 37371 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.64 34.964 152420000 0 0 0 0 11452000 21386000 14508000 0 0 21170000 0 27039000 0 20833000 36032000 22830 2451 20849 191685;191686;191687;191688;191689;191690;191691 152726;152727;152728;152729;152730;152731 152727 4 IDGIIDK Unmodified 772.43307 0.43306943 3732 Q96A49 SYAP1 Synapse-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 34.732 34.015 2 0.022716 36508 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 104.21 29.77 2679600000 0 482810000 15302000 120380000 128500000 120220000 186070000 131260000 123570000 181270000 290810000 221000000 189930000 166480000 321970000 22831 3732 20850 191692;191693;191694;191695;191696;191697;191698;191699;191700;191701;191702;191703;191704;191705;191706 152732;152733;152734;152735;152736;152737;152738;152739;152740;152741;152742 152736 10 IDGNLDYRDHEK Unmodified 1473.6848 0.68482046 2945 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 2 1 1 1 1 1 2 2 2 2 2 24.759 25.014 2;3 1.296E-06 26392 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 114.24 93.01 448000000 0 0 0 19132000 18684000 1516900 18621000 20047000 21490000 26132000 44379000 52392000 71832000 60192000 93580000 22832 2945 20851 191707;191708;191709;191710;191711;191712;191713;191714;191715;191716;191717;191718;191719;191720;191721;191722;191723;191724 152743;152744;152745;152746;152747;152748;152749;152750;152751;152752;152753;152754 152751 10 IDGNLVVRPYTPISSDDDK Unmodified 2103.0484 0.048413341 723 P00387 CYB5R3 NADH-cytochrome b5 reductase 3;NADH-cytochrome b5 reductase 3 membrane-bound form;NADH-cytochrome b5 reductase 3 soluble form yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 70.561 70.594 3 2.5502E-17 80991 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 94.856 81.429 45718000 0 0 0 5141700 0 6845100 0 0 0 0 0 16733000 0 0 16998000 22833 723 20852 191725;191726;191727;191728;191729;191730;191731 152755;152756;152757;152758;152759;152760;152761;152762 152760 8 IDGPPTPASLR Unmodified 1122.6033 0.60332266 602 O94913 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 yes yes 0 0 0 By MS/MS 10 0 1 1 52.224 52.503 2 0.013248 59575 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 63.076 44.636 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22834 602 20853 191732 152763 152763 1 IDGQQTIIACIESHQFQAK Unmodified 2186.079 0.079001963 1524 P47755 CAPZA2 F-actin-capping protein subunit alpha-2 yes yes 0 0 0 By MS/MS 2 0 1 1 88.009 79.879 3 0.035146 103936 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 30.042 23.606 5021900 5021900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22835 1524 20854 191733 152764 152764 0 IDGSLEVPLER Unmodified 1226.6507 0.65066678 4672 Q9NVM9 ASUN Protein asunder homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.126 69.203 2 4.1961E-05 79918 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 116.52 79.364 116930000 0 0 0 5175500 6774700 9588300 7999900 7552100 6696400 9840300 14823000 15506000 7474200 8507600 16991000 22836 4672 20855 191734;191735;191736;191737;191738;191739;191740;191741;191742;191743;191744;191745 152765;152766;152767;152768;152769;152770;152771;152772;152773;152774;152775;152776;152777 152774 13 IDGSLEVPLERAK Unmodified 1425.7827 0.78274359 4672 Q9NVM9 ASUN Protein asunder homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 67.793 62.132 3 0.012287 80210 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 50.46 33.686 182350000 14292000 120890000 47170000 0 0 0 0 0 0 0 0 0 0 0 0 22837 4672 20856 191746;191747;191748;191749 152778;152779;152780;152781;152782 152778 4 IDGSNTVDHK Unmodified 1084.5149 0.51490158 3295 Q8IZH2 XRN1 5'-3' exoribonuclease 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 7.1835 6.7327 2 2.1246E-05 7309 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.82 96.479 50676000 0 23896000 0 2171800 2188100 0 2712400 3566300 3358400 2404500 0 1628300 2938400 3420800 2390200 22838 3295 20857 191750;191751;191752;191753;191754;191755;191756;191757;191758;191759;191760;191761;191762 152783;152784;152785;152786;152787;152788;152789;152790;152791 152784 9 IDGTAEETEEREQATPR Unmodified 1930.8868 0.88682732 488 O75376 NCOR1 Nuclear receptor corepressor 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.721 27.919 3 1.1271E-28 29913 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 115.31 98.432 240790000 0 0 0 10253000 9944500 18465000 16039000 16498000 11096000 28089000 25412000 34448000 21074000 18584000 30888000 22839 488 20858 191763;191764;191765;191766;191767;191768;191769;191770;191771;191772;191773;191774 152792;152793;152794;152795;152796;152797;152798;152799;152800;152801;152802;152803;152804 152792 13 IDGVFAACQSGSFDK Unmodified 1600.7192 0.71915705 1347 P35249 RFC4 Replication factor C subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 3 1 1 1 1 1 1 1 1 1 1 1 1 65.344 64.667 2 1.6186E-23 74256 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 155.48 133.45 454660000 0 49204000 0 12304000 21879000 37524000 21425000 37762000 25602000 38485000 42696000 47318000 31411000 31610000 57443000 22840 1347 20859 191775;191776;191777;191778;191779;191780;191781;191782;191783;191784;191785;191786;191787;191788;191789 152805;152806;152807;152808;152809;152810;152811;152812;152813;152814;152815;152816;152817;152818;152819 152814 14 IDHILDAL Unmodified 908.49673 0.49673232 788 P04843 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.431 76.489 2 0.012144 87949 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 75.311 60.09 139540000 0 0 0 5820300 7454000 9282100 9575100 12874000 9236500 15093000 12240000 19520000 11296000 11433000 15721000 22841 788 20860 191790;191791;191792;191793;191794;191795;191796;191797;191798;191799;191800;191801 152820;152821;152822;152823;152824;152825;152826;152827;152828;152829;152830 152823 11 IDHLSIEK Unmodified 953.5182 0.51819605 387 O60244 MED14 Mediator of RNA polymerase II transcription subunit 14 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 36.804 32.629 2 0.018206 40875 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 107.9 58.306 44252000 0 33714000 10539000 0 0 0 0 0 0 0 0 0 0 0 0 22842 387 20861 191802;191803 152831 152831 0 IDHLTNNRNDLISK Unmodified 1651.8642 0.86418181 2688 Q4LE39 ARID4B AT-rich interactive domain-containing protein 4B yes yes 0 0 1 By MS/MS 2 0 1 1 43.1 36.307 3 0.0018745 49970 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.885 33.956 20507000 20507000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22843 2688 20862 191804 152832 152832 1 IDHSHVLVK Unmodified 1046.5873 0.58727866 3494 Q8TCY9 URGCP Up-regulator of cell proliferation yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 23.03 19.14 2 0.019961 27449 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.825 40.387 14289000 6548800 0 7740000 0 0 0 0 0 0 0 0 0 0 0 0 22844 3494 20863 191805;191806 152833 152833 1 IDHYLGK Unmodified 844.4443 0.44430282 947 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase yes yes 0 0 0 By MS/MS 10 0 1 1 17.006 17.561 2 0.047281 16759 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.9 35.591 22155000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22155000 22845 947 20864 191807 152834 152834 0 IDIDNSGYVSDYELQDLFK Unmodified 2233.0427 0.042659261 2421 Q14651 PLS1 Plastin-1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 96.188 92.556 2 0.00026722 114254 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.282 76.305 16516000 0 15232000 1284100 0 0 0 0 0 0 0 0 0 0 0 0 22846 2421 20865 191808;191809 152835 152835 1 IDIDPEETVK Unmodified 1157.5816 0.58158416 1746 P54727 RAD23B UV excision repair protein RAD23 homolog B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.55 3.8 3 2 6 2 2 1 1 1 1 1 1 1 57.184 54.754 2 0.0016916 61884 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 115.86 93.73 2305100000 177200000 1756800000 10837000 8175000 0 0 12981000 0 0 0 74824000 50897000 0 63188000 150240000 22847 1746 20866 191810;191811;191812;191813;191814;191815;191816;191817;191818;191819;191820 152836;152837;152838;152839;152840;152841;152842;152843;152844 152839 7 IDIDYQK Unmodified 893.44945 0.44944778 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.835 38.016 2 0.018785 42040 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 111.28 42.363 1943300000 0 0 0 92365000 123240000 128970000 154490000 184120000 125080000 124170000 169740000 283560000 201600000 189090000 166860000 22848 2290 20867 191821;191822;191823;191824;191825;191826;191827;191828;191829;191830;191831;191832 152845;152846;152847;152848;152849;152850;152851;152852 152848 4 IDIIPNPQER Unmodified 1193.6404 0.64043645 862 P08238;Q58FF7 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.11 3.8 6 1 12 2 3 2 1 1 1 1 1 1 1 1 1 1 1 1 65.125 64.008 2 0.00052853 72846 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 124.23 92.296 19787000000 137930000 5253000000 56941000 684980000 503010000 1707500000 815560000 677930000 519190000 1276400000 1652200000 1535200000 1146300000 1184900000 2636200000 22849 862 20868 191833;191834;191835;191836;191837;191838;191839;191840;191841;191842;191843;191844;191845;191846;191847;191848;191849;191850;191851 152853;152854;152855;152856;152857;152858;152859;152860;152861;152862;152863;152864;152865;152866;152867;152868;152869;152870;152871;152872;152873;152874;152875;152876;152877;152878;152879;152880;152881;152882;152883;152884;152885;152886;152887;152888;152889;152890;152891;152892;152893;152894;152895;152896 152870 44 IDIIPNPQERTLTLVDTGIGMTK Oxidation (M) 2540.352 0.35198893 862 P08238 HSP90AB1 Heat shock protein HSP 90-beta yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 90.9 86.222 3 8.9726E-11 105240 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 75.797 72.065 210600000 106970000 78052000 25580000 0 0 0 0 0 0 0 0 0 0 0 0 22850 862 20869 191852;191853;191854;191855 152897;152898;152899;152900;152901;152902;152903 152903 1097 7 IDIIPNPQERTLTLVDTGIGMTK Unmodified 2524.3571 0.3570743 862 P08238 HSP90AB1 Heat shock protein HSP 90-beta yes yes 0 0 1 By MS/MS By MS/MS 2.14 0.639 1 4 2 4 3 97.04 93.129 3 1.8472E-18 95636 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 97.457 89.924 164890000 78565000 86328000 0 0 0 0 0 0 0 0 0 0 0 0 0 22851 862 20869 191856;191857;191858;191859;191860;191861;191862 152904;152905;152906;152907;152908;152909;152910 152907 7 IDILDSALLRPGR Unmodified 1437.8304 0.83036248 1876 P62195 PSMC5 26S protease regulatory subunit 8 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 83.287 83.419 3 0.0013535 96675 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 60.628 39.788 33959000 0 0 0 0 0 3728100 0 0 0 10554000 4971400 7366400 0 0 7339700 22852 1876 20870 191863;191864;191865;191866;191867 152911;152912;152913;152914 152911 1 IDILTELRDK Unmodified 1214.6871 0.68705229 116 O00139 KIF2A Kinesin-like protein KIF2A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.08 3.33 2 1 9 2 1 1 1 1 1 1 1 1 1 1 77.35 76.024 3 0.0020033 87150 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.005 28.646 81804000 13427000 20938000 0 1421900 0 7933000 2706800 3861600 0 4730700 4542600 0 3670300 3736600 14836000 22853 116 20871 191868;191869;191870;191871;191872;191873;191874;191875;191876;191877;191878;191879 152915;152916;152917;152918;152919;152920;152921 152918 7 IDINMSGFNETDDLK Oxidation (M) 1726.772 0.77198048 986 P13797 PLS3 Plastin-3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.989 68.069 2 3.4327E-72 77299 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 184.55 171.94 286390000 0 0 0 15704000 12876000 29219000 18651000 14709000 15106000 27633000 31582000 36508000 18862000 23103000 42436000 22854 986 20872 191880;191881;191882;191883;191884;191885;191886;191887;191888;191889;191890;191891 152922;152923;152924;152925;152926;152927;152928;152929;152930;152931;152932;152933;152934;152935;152936;152937 152926 1334 16 IDINMSGFNETDDLK Unmodified 1710.7771 0.77706586 986 P13797 PLS3 Plastin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.49 79.593 2 2.1013E-70 91929 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 215.53 188.2 320550000 0 0 0 0 11729000 35463000 9920300 12423000 13104000 33862000 31348000 35041000 7942700 30864000 98849000 22855 986 20872 191892;191893;191894;191895;191896;191897;191898;191899;191900;191901;191902;191903 152938;152939;152940;152941;152942;152943;152944;152945;152946;152947;152948;152949;152950;152951 152938 14 IDISNVK Unmodified 787.44397 0.44396847 2083 Q02878 RPL6 60S ribosomal protein L6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 34.691 34.848 2 0.02333 37036 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.986 16.268 492870000 0 0 0 25614000 23590000 27106000 29619000 38620000 27573000 53836000 0 70101000 51256000 49823000 95734000 22856 2083 20873 191904;191905;191906;191907;191908;191909;191910;191911;191912;191913;191914 152952;152953;152954 152952 3 IDISPSTFRK Unmodified 1162.6346 0.63462279 5122 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 2 1 1 1 1 1 1 51.394 51.556 3 0.02683 57909 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 33.088 11.625 158660000 0 0 0 0 13766000 18089000 28946000 24763000 0 36683000 7806900 0 12973000 8129100 7499200 22857 5122 20874 191915;191916;191917;191918;191919;191920;191921;191922;191923;191924 152955;152956 152956 2 IDISPVLLQK Unmodified 1124.6805 0.68051035 1614 P49959 MRE11A Double-strand break repair protein MRE11A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 80.282 79.164 2 1.3548E-12 98488 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 180.45 134 1743900000 21145000 880830000 13664000 43822000 51422000 67290000 65282000 52486000 47674000 80425000 89975000 97688000 59949000 67771000 104440000 22858 1614 20875 191925;191926;191927;191928;191929;191930;191931;191932;191933;191934;191935;191936;191937;191938;191939;191940 152957;152958;152959;152960;152961;152962;152963;152964;152965;152966;152967;152968;152969;152970;152971;152972;152973;152974;152975;152976 152962 20 IDISQLVITK Unmodified 1128.6754 0.67542497 1234 P28340 POLD1 DNA polymerase delta catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 82.077 82.167 2 0.020528 95310 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 47.187 12.8 91994000 0 0 0 4723300 0 7482300 6188200 7640700 3240100 11762000 9536500 11806000 5534500 7385400 16695000 22859 1234 20876 191941;191942;191943;191944;191945;191946;191947;191948;191949;191950;191951 152977;152978;152979;152980 152980 4 IDIVENR Unmodified 857.46068 0.46068117 737 P00966 ASS1 Argininosuccinate synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.735 32.919 2 0.021005 36148 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 107.43 40.395 1886900000 0 0 0 64679000 62276000 53862000 70167000 65156000 38466000 81475000 274280000 241980000 63854000 200110000 670610000 22860 737 20877 191952;191953;191954;191955;191956;191957;191958;191959;191960;191961;191962;191963 152981;152982;152983;152984;152985;152986;152987;152988;152989;152990;152991;152992 152981 10 IDIYQLDTASISGTITNEK Unmodified 2081.0528 0.052830017 4701 Q9NWT1 PAK1IP1 p21-activated protein kinase-interacting protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 89.603 81.472 2 0.0020984 105926 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.283 48.177 6272100 6272100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22861 4701 20878 191964 152993 152993 1 IDLAGSSLSGILDK Unmodified 1387.7559 0.75586013 3754 Q96B97 SH3KBP1 SH3 domain-containing kinase-binding protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 87.666 84.451 2 0.0014576 105133 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.97 80.852 2232300 0 2232300 0 0 0 0 0 0 0 0 0 0 0 0 0 22862 3754 20879 191965;191966 152994;152995 152994 1 IDLAVLLGK Unmodified 940.59572 0.59571809 2380 Q14157 UBAP2L Ubiquitin-associated protein 2-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 88.996 89.067 2 0.0031541 102528 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 92.439 59.599 193380000 0 0 0 4338100 8473400 12226000 12681000 10810000 16400000 21252000 19902000 13303000 9394400 14777000 49825000 22863 2380 20880 191967;191968;191969;191970;191971;191972;191973;191974;191975;191976;191977;191978 152996;152997;152998;152999;153000;153001;153002;153003;153004;153005;153006;153007 153003 12 IDLCLSSEGSEVILATSSDEK Unmodified 2252.073 0.072973111 5220 Q9Y547 HSPB11 Intraflagellar transport protein 25 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 6 3 4 3 2 88.177 83.632 2;3 3.0777E-44 104726 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 157.23 144.44 235100000 186720000 19625000 28752000 0 0 0 0 0 0 0 0 0 0 0 0 22864 5220 20881 191979;191980;191981;191982;191983;191984;191985;191986;191987 153008;153009;153010;153011;153012;153013;153014;153015;153016;153017;153018;153019;153020;153021;153022 153008 15 IDLDSMENSERIK Unmodified 1548.7454 0.7453718 4385 Q9H3R5 CENPH Centromere protein H yes yes 0 0 1 By MS/MS 2 0 1 1 64.6 58.682 3 0.0023946 75259 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.078 45.85 17493000 0 17493000 0 0 0 0 0 0 0 0 0 0 0 0 0 22865 4385 20882 191988 153023 153023 0 IDLEAEK Unmodified 816.4229 0.42289868 3391 Q8NBF2 NHLRC2 NHL repeat-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 7 3.69 1 1 3 2 1 1 1 30.925 29.225 2 0.02978 37649 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.262 27.227 204360000 0 187550000 0 0 0 5557500 0 0 0 5041500 6218300 0 0 0 0 22866 3391 20883 191989;191990;191991;191992;191993 153024;153025;153026 153024 3 IDLENRQVATK Unmodified 1285.699 0.69901396 1647 P51149 RAB7A Ras-related protein Rab-7a yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 36.414 31.598 3 0.00037336 41497 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.659 40.784 392830000 51788000 154920000 186120000 0 0 0 0 0 0 0 0 0 0 0 0 22867 1647 20884 191994;191995;191996;191997 153027;153028;153029;153030;153031 153028 5 IDLENTLEQEQEALVNR Unmodified 2013.0015 0.0014631481 2598 Q16204 CCDC6 Coiled-coil domain-containing protein 6 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 86.222 86.359 3 0.00052003 99833 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.073 48.864 15497000 0 0 0 0 0 0 0 0 0 5184400 0 0 0 0 10312000 22868 2598 20885 191998;191999 153032;153033 153033 2 IDLESTIDMSCAK Unmodified 1481.6742 0.67418069 3337 Q8N543 OGFOD1 Prolyl 3-hydroxylase OGFOD1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 77.817 73.71 2 0.00049418 91721 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.86 77.518 354580000 0 354580000 0 0 0 0 0 0 0 0 0 0 0 0 0 22869 3337 20886 192000;192001 153034;153035 153034 2 IDLESTIDMSCAK Oxidation (M) 1497.6691 0.66909532 3337 Q8N543 OGFOD1 Prolyl 3-hydroxylase OGFOD1 yes yes 0 1 0 By MS/MS By MS/MS 2.67 0.471 1 2 1 2 67.897 62.675 2 1.7175E-06 79999 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.51 73.143 123550000 465150 123080000 0 0 0 0 0 0 0 0 0 0 0 0 0 22870 3337 20886 192002;192003;192004 153036;153037 153036 4926 1 IDLEVRSLETCMYDHK Unmodified 2007.9394 0.93939694 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 1 By MS/MS 2 0 1 1 81.359 73.228 4 0.0019437 95922 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.83 49.25 27591000 27591000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22871 2392 20887 192005 153038 153038 1 IDLFEREEVGGR Unmodified 1418.7154 0.7153923 4901 Q9UHG3 PCYOX1 Prenylcysteine oxidase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 61.036 61.21 3 0.021427 69760 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 27.005 9.4189 64689000 0 0 0 0 2405500 5766600 3180500 11029000 5116600 3004600 7264300 7728600 5150500 4419000 9623800 22872 4901 20888 192006;192007;192008;192009;192010;192011;192012;192013;192014;192015;192016 153039 153039 1 IDLGERPVVQR Unmodified 1280.7201 0.72008375 3485 Q8TC07 TBC1D15 TBC1 domain family member 15 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 45.56 45.792 3 0.0019871 51328 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 54.471 37.445 651440000 0 0 0 52782000 0 67956000 41681000 56103000 34042000 67124000 67132000 57149000 61178000 55432000 90855000 22873 3485 20889 192017;192018;192019;192020;192021;192022;192023;192024;192025;192026;192027 153040;153041;153042;153043;153044 153043 5 IDLGFGTK Unmodified 849.45962 0.45961853 3489 Q8TCG1 KIAA1524 Protein CIP2A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.12 3.26 1 1 6 2 1 1 1 1 1 1 61.613 60.453 2 0.028576 68533 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 56.659 10.777 97429000 0 62305000 0 0 0 5979500 4093500 0 4318000 0 6245000 8970300 0 5517600 0 22874 3489 20890 192028;192029;192030;192031;192032;192033;192034;192035 153045;153046;153047;153048 153048 4 IDLGNCQDEK Unmodified 1190.5238 0.52375171 5054 Q9UPQ0 LIMCH1 LIM and calponin homology domains-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27.857 27.304 2 0.0014272 28363 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 91.867 72.772 316660000 6262500 83027000 0 14155000 11670000 19359000 22084000 15131000 13136000 21176000 21433000 26017000 17125000 14939000 31150000 22875 5054 20891 192036;192037;192038;192039;192040;192041;192042;192043;192044;192045;192046;192047;192048;192049 153049;153050;153051;153052;153053;153054;153055;153056;153057;153058;153059;153060;153061;153062 153058 14 IDLLPEGK Unmodified 883.50148 0.50148335 1799 P57772 EEFSEC Selenocysteine-specific elongation factor yes yes 0 0 0 By MS/MS By MS/MS By matching 2 0 3 1 1 1 64.978 58.987 2 0.014055 75680 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.492 35.732 102500000 7540500 91654000 3308400 0 0 0 0 0 0 0 0 0 0 0 0 22876 1799 20892 192050;192051;192052 153063;153064;153065 153064 3 IDLNLLTR Unmodified 956.56548 0.56548059 4894 Q9UHB7 AFF4 AF4/FMR2 family member 4 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 78.109 78.22 2 0.011957 89851 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.738 14.95 35042000 0 0 0 0 1696000 0 3544900 0 3061300 4201100 3524700 4629900 4822400 3170900 6390800 22877 4894 20893 192053;192054;192055;192056;192057;192058;192059;192060;192061 153066;153067;153068;153069;153070;153071 153068 6 IDLNYLR Unmodified 905.49707 0.49706667 3191 Q86X76 NIT1 Nitrilase homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 66.701 66.86 2 0.048847 75858 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.803 4.0434 24302000 0 0 0 2182300 0 0 0 0 0 0 3524900 3883200 0 3783700 10928000 22878 3191 20894 192062;192063;192064;192065;192066 153072 153072 1 IDLPAENSNSETIIITGK Unmodified 1913.9946 0.99458686 2033 Q00341 HDLBP Vigilin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.16 3.28 4 2 19 1 4 1 1 2 2 2 1 2 2 1 2 1 1 2 78.938 77.919 2;3 1.1434E-29 90495 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 141.46 111.53 1241600000 30136000 775210000 6413900 5915600 22618000 40685000 21531000 17208000 25917000 80126000 46531000 52902000 19066000 30818000 66545000 22879 2033 20895 192067;192068;192069;192070;192071;192072;192073;192074;192075;192076;192077;192078;192079;192080;192081;192082;192083;192084;192085;192086;192087;192088;192089;192090;192091 153073;153074;153075;153076;153077;153078;153079;153080;153081;153082;153083;153084;153085;153086;153087;153088;153089;153090;153091;153092 153085 19 IDLPEVQIEHDPELEK Unmodified 1902.9575 0.95747307 2456 Q14966 ZNF638 Zinc finger protein 638 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 81.776 76.387 3 0.00012083 97557 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.433 61.799 116840000 20540000 96303000 0 0 0 0 0 0 0 0 0 0 0 0 0 22880 2456 20896 192092;192093;192094 153093;153094;153095;153096 153096 4 IDLPEYQGEPDEISIQK Unmodified 1972.963 0.96295238 4238 Q9BY32 ITPA Inosine triphosphate pyrophosphatase yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By matching 7.35 3.62 4 3 13 2 4 1 1 1 2 1 1 1 1 1 1 1 1 1 79.369 77.798 2;3 1.8416E-225 95387 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 255.54 237.73 2061300000 28275000 1837500000 1295800 4609900 8139800 29264000 8338400 11540000 7227100 25395000 19185000 19425000 9588300 16031000 35461000 22881 4238 20897 192095;192096;192097;192098;192099;192100;192101;192102;192103;192104;192105;192106;192107;192108;192109;192110;192111;192112;192113;192114 153097;153098;153099;153100;153101;153102;153103;153104;153105;153106;153107 153100 10 IDLQVPSSESK Unmodified 1201.619 0.6190323 3618 Q92541 RTF1 RNA polymerase-associated protein RTF1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 9 2.65 2 14 1 1 2 2 1 2 1 1 1 1 1 1 1 53.103 52.255 2 4.1806E-05 59408 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 132.78 79.613 611890000 8366000 259750000 0 25601000 27158000 26059000 33294000 0 16812000 35050000 35024000 33943000 35784000 28264000 46781000 22882 3618 20898 192115;192116;192117;192118;192119;192120;192121;192122;192123;192124;192125;192126;192127;192128;192129;192130 153108;153109;153110;153111;153112;153113;153114;153115;153116;153117;153118;153119 153109 8 IDLTLLNR Unmodified 956.56548 0.56548059 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.524 76.582 2 1.5622E-12 87801 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 170.06 88.763 126750000 0 0 0 6934000 5859200 9390100 8142900 9692400 8130700 9486500 13554000 15527000 11054000 10799000 18179000 22883 2930 20899 192131;192132;192133;192134;192135;192136;192137;192138;192139;192140;192141;192142 153120;153121;153122;153123;153124;153125;153126;153127;153128;153129;153130;153131 153123 12 IDLVCQAVLSGK Unmodified 1301.7013 0.70132214 4517 Q9HCK8 CHD8 Chromodomain-helicase-DNA-binding protein 8 yes yes 0 0 0 By MS/MS 10 0 1 1 75.8 75.279 2 0.028503 87353 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 51.979 33.754 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22884 4517 20900 192143 153132 153132 1 IDMESLLMCTVDDLK Oxidation (M) 1797.8199 0.81985865 5301 Q9Y6Y8 SEC23IP SEC23-interacting protein yes yes 0 1 0 By MS/MS 2 0 2 2 97.136 92.332 2 8.7502E-40 111175 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 142.1 117.24 27189000 0 27189000 0 0 0 0 0 0 0 0 0 0 0 0 0 22885 5301 20901 192144;192145 153133;153134 153133 6704;6705 2 IDMESLLMCTVDDLK Unmodified 1781.8249 0.82494403 5301 Q9Y6Y8 SEC23IP SEC23-interacting protein yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 100.95 94.529 2 3.7489E-23 119415 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 152.47 137.78 21950000 8783000 13167000 0 0 0 0 0 0 0 0 0 0 0 0 0 22886 5301 20901 192146;192147 153135;153136 153136 2 IDMSSNNGCMRDPTLYR Unmodified 2028.8816 0.88156448 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 55.585 55.948 3 0.00014958 63460 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 53.777 37.284 15064000 0 0 0 0 0 2178900 0 0 0 0 4506100 0 0 0 8379000 22887 848 20902 192148;192149;192150;192151 153137;153138;153139 153138 3 IDNDDEPHTSK Unmodified 1269.5473 0.54732392 317 O43314 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 8.159 4.856 3 0.042874 7143 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 29.131 24.338 28688000 0 28688000 0 0 0 0 0 0 0 0 0 0 0 0 0 22888 317 20903 192152;192153 153140 153140 1 IDNIVLMK Unmodified 944.53649 0.53648865 3139 Q86U06 RBM23 Probable RNA-binding protein 23 yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 62.602 62.986 2 0.025333 71162 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 58.782 28.597 12563000 0 0 0 0 0 0 0 0 0 0 0 0 0 4585700 7977700 22889 3139 20904 192154;192155;192156 153141;153142 153141 2 IDNLDVNR Unmodified 957.48796 0.48795855 505 O75475 PSIP1 PC4 and SFRS1-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 2 2 2 2 1 2 2 2 2 1 2 39.305 39.571 2 0.004651 33067 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 109.86 22.909 634820000 0 0 0 15801000 0 62734000 46435000 36508000 18890000 70171000 74865000 113150000 58130000 26925000 111210000 22890 505 20905 192157;192158;192159;192160;192161;192162;192163;192164;192165;192166;192167;192168;192169;192170;192171;192172;192173;192174;192175;192176 153143;153144;153145;153146;153147;153148;153149;153150;153151;153152;153153;153154;153155;153156;153157;153158;153159;153160;153161 153156 18 IDNNPFAK Unmodified 917.46068 0.46068117 255 O15119;Q13207;Q9UL17 TBX3;TBX2;TBX21 T-box transcription factor TBX3;T-box transcription factor TBX2;T-box transcription factor TBX21 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 37.16 36.606 2 0.029513 40476 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 56.091 31.24 329910000 0 38779000 0 0 0 19843000 22283000 26327000 18679000 26077000 30281000 48257000 33908000 34995000 30484000 22891 255 20906 192177;192178;192179;192180;192181;192182;192183;192184;192185;192186;192187;192188 153162;153163;153164;153165;153166;153167;153168 153162 4 IDNQRQQLGTAVELEMAK Oxidation (M) 2059.0368 0.036802797 4746 Q9NYL9 TMOD3 Tropomodulin-3 yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 60.275 55.436 3 0.0014116 68481 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 50.493 39.632 85124000 0 35390000 49734000 0 0 0 0 0 0 0 0 0 0 0 0 22892 4746 20907 192189;192190 153169;153170 153170 6121 2 IDNQRQQLGTAVELEMAK Unmodified 2043.0419 0.041888175 4746 Q9NYL9 TMOD3 Tropomodulin-3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 73.674 68.151 3 1.1808E-47 87097 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.82 98.397 90252000 10047000 67631000 12574000 0 0 0 0 0 0 0 0 0 0 0 0 22893 4746 20907 192191;192192;192193 153171;153172;153173 153171 3 IDNSNTPFLPK Unmodified 1244.6401 0.6401021 2062 Q01780 EXOSC10 Exosome component 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 59.492 59.89 2 0.0061488 68560 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 85.676 61.157 19869000 0 0 0 0 0 0 0 0 0 0 0 0 10187000 0 9682000 22894 2062 20908 192194;192195;192196 153174;153175;153176 153176 2 IDNSQVESGSLEDDWDFLPPK Unmodified 2390.0914 0.091400367 1225 P27797 CALR Calreticulin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 5.22 3.82 9 2 7 2 6 3 1 1 2 1 2 90.368 87.649 2;3 2.7482E-103 104855 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 210.36 191.04 1577700000 77125000 1454500000 8717800 0 773370 0 0 0 0 4247000 7258600 4736500 0 0 20370000 22895 1225 20909 192197;192198;192199;192200;192201;192202;192203;192204;192205;192206;192207;192208;192209;192210;192211;192212;192213;192214 153177;153178;153179;153180;153181;153182;153183;153184;153185;153186;153187;153188;153189;153190;153191;153192;153193;153194;153195;153196;153197;153198 153192 22 IDNSQVESGSLEDDWDFLPPKK Unmodified 2518.1864 0.18636339 1225 P27797 CALR Calreticulin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.62 3.61 7 2 4 4 4 1 1 1 1 1 85.121 82.191 2;3 2.7515E-138 95568 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 184.96 175.39 1029600000 218030000 609480000 74707000 1552800 0 0 0 0 0 0 0 10585000 0 8653500 106550000 22896 1225 20910 192215;192216;192217;192218;192219;192220;192221;192222;192223;192224;192225;192226;192227 153199;153200;153201;153202;153203;153204;153205;153206;153207;153208;153209;153210;153211;153212;153213;153214;153215;153216;153217 153206 18 IDNYAVPVMDQYQR Oxidation (M) 1726.7985 0.79847001 5397 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 2 1 1 1 1 1 55.377 55.376 2 0.0048416 63557 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 42.743 28.053 + 42831000 0 0 0 16466000 4772800 0 0 4116600 0 0 4635600 7471300 0 0 5368600 22897 5397 20911 192228;192229;192230;192231;192232;192233;192234 153218 153218 6768 1 IDPASEAK Unmodified 829.41815 0.41814765 2019 P85037 FOXK1 Forkhead box protein K1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 7 1 1 1 1 1 1 1 14.41 14.498 2 0.033014 14053 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 53.968 28.969 210450000 0 0 0 23520000 24539000 33095000 0 28879000 23110000 0 0 0 39059000 0 38243000 22898 2019 20912 192235;192236;192237;192238;192239;192240;192241 153219;153220 153219 2 IDPEAFITR Unmodified 1060.5553 0.55530983 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 75.182 75.218 2 0.0037823 86692 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 88.948 54.945 624000000 0 0 0 30339000 40372000 59182000 48075000 49105000 40056000 83223000 69590000 91800000 47431000 64832000 0 22899 3641 20913 192242;192243;192244;192245;192246;192247;192248;192249;192250;192251;192252 153221;153222;153223;153224;153225;153226;153227;153228 153227 6 IDPEVAAFLQK Unmodified 1229.6656 0.66558856 3673 Q92871 PMM1 Phosphomannomutase 1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 84.274 80.778 2 0.00046728 100329 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.46 78.88 60203000 0 58110000 2092300 0 0 0 0 0 0 0 0 0 0 0 0 22900 3673 20914 192253;192254;192255 153229;153230;153231 153229 3 IDPFGGDPFK Unmodified 1091.5288 0.52876073 1457 P42566 EPS15 Epidermal growth factor receptor substrate 15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 79.059 78.579 2 0.0091008 90390 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.433 24.261 143370000 0 65824000 4889900 4518000 0 7607000 5089000 4372300 4755200 11566000 5453000 7071100 4752300 4423700 13047000 22901 1457 20915 192256;192257;192258;192259;192260;192261;192262;192263;192264;192265;192266;192267;192268 153232;153233;153234;153235;153236 153235 5 IDPHAPNEMLYGR Oxidation (M) 1527.714 0.71401209 370 O43813 LANCL1 LanC-like protein 1 yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 42.632 43.232 3 0.00043317 47404 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.891 51.893 25523000 0 0 0 0 0 0 0 0 0 0 11136000 0 0 0 14387000 22902 370 20916 192269;192270 153237 153237 467 1 IDPLAPLDK Unmodified 980.55425 0.5542472 955 P11766 ADH5 Alcohol dehydrogenase class-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.67 3.89 4 1 4 1 3 1 1 1 1 1 75.3 72.75 1;2 0.0057209 90519 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.57 82.756 4875600000 130420000 4553500000 94116000 0 0 0 0 0 0 0 14532000 19527000 0 15738000 47810000 22903 955 20917 192271;192272;192273;192274;192275;192276;192277;192278;192279 153238;153239;153240;153241;153242;153243;153244;153245;153246;153247 153238 9 IDPNVLLDPADEK Unmodified 1437.7351 0.73512469 3366 Q8N7H5 PAF1 RNA polymerase II-associated factor 1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.257 77.316 2 1.2821E-08 89135 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 110.08 92.213 1003900000 0 0 0 44894000 52090000 52694000 49599000 50248000 50960000 84093000 119960000 143900000 108900000 121370000 125160000 22904 3366 20918 192280;192281;192282;192283;192284;192285;192286;192287;192288;192289;192290;192291 153248;153249;153250;153251;153252;153253;153254;153255;153256;153257;153258;153259 153254 12 IDPPDPTKPDYDIR Unmodified 1640.8046 0.80460124 206 O14733 MAP2K7 Dual specificity mitogen-activated protein kinase kinase 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 56.945 57.149 3 0.02278 64853 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 40.552 28.406 61574000 0 0 0 0 6885000 9423000 8027900 0 0 0 10260000 8309300 5892900 6633600 6142900 22905 206 20919 192292;192293;192294;192295;192296;192297;192298;192299 153260;153261;153262;153263;153264 153261 3 IDPQTGWPFFVDHNSR Unmodified 1914.9013 0.90129559 694 O95817 BAG3 BAG family molecular chaperone regulator 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 83.629 83.763 3 0.011955 96646 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.009 28.105 24045000 0 0 0 0 0 3069700 0 0 3691300 0 0 0 0 0 17284000 22906 694 20920 192300;192301;192302 153265 153265 1 IDPSALVQK Unmodified 969.5495 0.54949617 4628 Q9NSI2 FAM207A Protein FAM207A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 53.064 53.246 2 0.0033419 59563 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 90.37 48.868 185890000 0 0 0 21433000 0 32073000 24725000 0 14250000 0 0 32077000 23978000 0 37354000 22907 4628 20921 192303;192304;192305;192306;192307;192308;192309 153266;153267;153268;153269;153270;153271;153272;153273;153274;153275;153276;153277 153276 12 IDPSKPESILK Unmodified 1225.6918 0.69180331 2440 Q14696 MESDC2 LDLR chaperone MESD yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 2 3 2 57.82 52.003 2;3 0.0013172 67639 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.813 39.955 572610000 25477000 519220000 27918000 0 0 0 0 0 0 0 0 0 0 0 0 22908 2440 20922 192310;192311;192312;192313;192314;192315;192316 153278;153279;153280;153281;153282;153283 153280 5 IDPTLCR Unmodified 873.43784 0.43783723 1427 P41091;Q2VIR3 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein yes no 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.45 31.636 2 0.023696 33992 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 101.21 17.924 295220000 0 0 0 11199000 19197000 24141000 17761000 19445000 13827000 24154000 28222000 32746000 23662000 30800000 50069000 22909 1427 20923 192317;192318;192319;192320;192321;192322;192323;192324;192325;192326;192327;192328 153284;153285;153286;153287 153287 4 IDPTVTMMQVEEKPDVTYSDVGGCK 2 Oxidation (M) 2830.2711 0.27109735 1369 P35998 PSMC2 26S protease regulatory subunit 7 yes yes 0 2 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.24 3.19 2 2 13 4 1 1 1 1 2 2 2 1 1 1 63.751 62.644 3 3.5682E-96 71897 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 145.89 142.67 579030000 0 226570000 0 17251000 0 27546000 8706000 0 6319200 88842000 66682000 101570000 9695200 9693600 16150000 22910 1369 20924 192329;192330;192331;192332;192333;192334;192335;192336;192337;192338;192339;192340;192341;192342;192343;192344;192345 153288;153289;153290;153291;153292;153293;153294;153295;153296;153297;153298;153299;153300;153301;153302;153303;153304;153305;153306;153307 153290 2125;2126 15 IDPTVTMMQVEEKPDVTYSDVGGCK Oxidation (M) 2814.2762 0.27618272 1369 P35998 PSMC2 26S protease regulatory subunit 7 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.39 3.06 2 3 18 5 2 2 2 1 1 2 2 2 2 2 73.98 73.128 3 2.1635E-120 88191 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 158.94 156.53 948460000 0 656720000 0 7608800 19629000 28240000 3109400 8242000 0 53222000 49978000 73580000 0 13796000 34334000 22911 1369 20924 192346;192347;192348;192349;192350;192351;192352;192353;192354;192355;192356;192357;192358;192359;192360;192361;192362;192363;192364;192365;192366;192367;192368 153308;153309;153310;153311;153312;153313;153314;153315;153316;153317;153318;153319;153320;153321;153322;153323;153324;153325;153326;153327;153328;153329;153330;153331;153332 153313 2125;2126 25 IDPTVTMMQVEEKPDVTYSDVGGCK Unmodified 2798.2813 0.2812681 1369 P35998 PSMC2 26S protease regulatory subunit 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.8 4 1 8 1 3 1 1 1 1 1 1 1 1 1 79.798 78.05 2;3 1.3689E-177 96847 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 243.86 230.35 927850000 19338000 768390000 9648300 0 10571000 12358000 2597400 8237800 0 34864000 23144000 30029000 0 8677700 0 22912 1369 20924 192369;192370;192371;192372;192373;192374;192375;192376;192377;192378;192379;192380;192381 153333;153334;153335;153336;153337;153338;153339;153340;153341;153342;153343;153344;153345;153346 153337 13 IDPYVFDREGLK Unmodified 1450.7456 0.7456298 1522 P47712 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.11 3.8 6 1 12 1 3 3 1 1 1 1 1 1 1 1 1 1 1 1 71.581 70.025 2;3 0.00017861 79975 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 83.182 65.109 1035400000 71950000 186810000 112340000 23942000 24700000 56106000 35433000 44646000 48002000 65963000 55351000 63849000 58742000 56505000 131020000 22913 1522 20925 192382;192383;192384;192385;192386;192387;192388;192389;192390;192391;192392;192393;192394;192395;192396;192397;192398;192399;192400 153347;153348;153349;153350;153351;153352;153353;153354;153355;153356;153357;153358;153359;153360;153361;153362;153363 153361 15 IDQIEDLQDQLEDMMEDANEIQEALSR Unmodified 3190.4282 0.42820293 4784 Q9NZZ3 CHMP5 Charged multivesicular body protein 5 yes yes 0 0 0 By MS/MS 2 0 1 1 104.07 95.943 3 4.2371E-47 123262 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 111.79 109.62 8711700 8711700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22914 4784 20926 192401 153364;153365;153366 153365 3 IDQILVAHPYMK Unmodified 1426.7643 0.76425675 454 O75113 N4BP1 NEDD4-binding protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 74.263 66.133 3 0.047883 87487 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.842 46.447 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22915 454 20927 192402 153367 153367 1 IDQILVAHPYMK Oxidation (M) 1442.7592 0.75917137 454 O75113 N4BP1 NEDD4-binding protein 1 yes yes 0 1 0 By MS/MS 2 0 1 1 63.611 55.332 3 0.010987 74714 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.569 35.496 6692600 6692600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22916 454 20927 192403 153368 153368 575 0 IDQISIEELDIIYK Unmodified 1690.9029 0.9029183 5092 Q9Y295 DRG1 Developmentally-regulated GTP-binding protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 96.013 87.882 2 1.0583E-05 113619 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 100.93 85.392 8597300 8597300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22917 5092 20928 192404 153369 153369 1 IDQISMEEVDR Oxidation (M) 1349.6133 0.613295 1753 P55039 DRG2 Developmentally-regulated GTP-binding protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.621 36.854 2 0.00038917 40729 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 80.24 45.987 55382000 0 0 0 3538200 0 8135100 5120600 3866900 3348700 4642500 5511700 5487100 5400100 0 10331000 22918 1753 20929 192405;192406;192407;192408;192409;192410;192411;192412;192413;192414;192415;192416 153370;153371;153372;153373;153374;153375;153376;153377;153378 153375 2856 9 IDQISMEEVDR Unmodified 1333.6184 0.61838038 1753 P55039 DRG2 Developmentally-regulated GTP-binding protein 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 55.364 55.232 2 0.00050728 62829 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 83 50.585 20914000 0 0 0 4424200 2926500 0 0 5248900 3294100 0 0 0 0 5020500 0 22919 1753 20929 192417;192418;192419;192420;192421;192422;192423;192424 153379;153380;153381;153382;153383;153384 153381 6 IDQLEGDHQLIQEALIFDNK Unmodified 2338.1805 0.18049015 971 P12814 ACTN1 Alpha-actinin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 3.5 2.93 4 1 1 2 3 1 92.533 88.288 3 7.1101E-72 110673 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 137.99 116.39 327500000 99036000 224000000 0 0 0 0 0 0 0 0 0 0 0 0 4462300 22920 971 20930 192425;192426;192427;192428;192429;192430 153385;153386;153387;153388;153389;153390;153391 153391 7 IDQLQEELLHTQLK Unmodified 1706.9203 0.9202997 394 O60313 OPA1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 77.892 77.256 3 2.319E-06 97163 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.756 76.968 41947000 0 18202000 4092500 795980 1362000 3541900 1022800 2415500 1517400 3711400 3011900 2273200 0 0 0 22921 394 20931 192431;192432;192433;192434;192435;192436;192437;192438;192439;192440;192441 153392;153393;153394 153393 3 IDQSEFEGFEYINPLLMSAEECV Unmodified 2719.2033 0.20333536 1443 P41743 PRKCI Protein kinase C iota type yes yes 0 0 0 By MS/MS 2 0 1 1 101.54 96.831 3 0.0093644 119632 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 26.21 23.486 14012000 0 14012000 0 0 0 0 0 0 0 0 0 0 0 0 0 22922 1443 20932 192442 153395;153396 153395 2 IDQVNQLLELDHQK Unmodified 1691.8842 0.88424855 1838 P61201 COPS2 COP9 signalosome complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 1 1 1 1 1 2 2 1 2 2 2 74.719 74.818 2;3 8.431E-12 86515 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 99.927 94.386 556420000 0 0 0 11316000 16656000 44611000 23770000 40373000 41244000 64901000 68949000 64872000 29716000 37863000 112150000 22923 1838 20933 192443;192444;192445;192446;192447;192448;192449;192450;192451;192452;192453;192454;192455;192456;192457;192458;192459 153397;153398;153399;153400;153401;153402;153403;153404;153405 153404 9 IDREISAILK Unmodified 1156.6816 0.68157298 3796 Q96DG6 CMBL Carboxymethylenebutenolidase homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 4 2 12 2 2 2 1 1 1 1 1 1 1 1 1 1 1 1 62.802 61.129 3 0.0016685 83419 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.767 51.485 1626100000 883490000 447750000 74427000 4532300 3364400 7080200 8429800 8093400 6073600 15342000 21626000 27430000 9982400 22664000 85826000 22924 3796 20934 192460;192461;192462;192463;192464;192465;192466;192467;192468;192469;192470;192471;192472;192473;192474;192475;192476;192477 153406;153407;153408;153409;153410;153411;153412;153413;153414;153415;153416;153417;153418;153419;153420;153421;153422;153423;153424 153417 17 IDRFGEDAGYTK Unmodified 1370.6466 0.64664404 2821 Q5VVQ6 YOD1 Ubiquitin thioesterase OTU1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 33.333 33.593 3 0.018669 37362 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 27.58 21.143 36566000 0 0 0 7484700 0 3119500 0 2800600 1228800 3658400 5232600 2853400 3990200 2138200 4059400 22925 2821 20935 192478;192479;192480;192481;192482;192483;192484;192485;192486;192487 153425 153425 1 IDRIEESDQGPYAIILAPTR Unmodified 2256.175 0.17501084 4168 Q9BUQ8 DDX23 Probable ATP-dependent RNA helicase DDX23 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 81.412 81.543 3 1.2904E-59 94029 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.78 92.359 44559000 0 0 0 0 0 7145900 0 6445100 5237900 0 9090900 8269400 4316500 4052900 0 22926 4168 20936 192488;192489;192490;192491;192492;192493;192494;192495 153426;153427;153428;153429;153430;153431;153432;153433;153434;153435;153436 153428 11 IDRLALLNEK Unmodified 1183.6925 0.69247202 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 56.039 56.074 3 0.0061959 62652 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 58.172 24.211 59853000 0 0 0 6739600 5379600 0 9310000 6747000 0 9236900 0 8718500 6614700 7106400 0 22927 2459 20937 192496;192497;192498;192499;192500;192501;192502;192503 153437;153438;153439 153439 3 IDRLDGAHAPELTK Unmodified 1534.8104 0.81035532 570 O76003 GLRX3 Glutaredoxin-3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.17 3.78 1 9 3 23 7 3 3 2 2 1 2 2 2 2 2 2 2 2 2 46.102 44.411 3;4 7.999E-32 53879 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 126.77 101.21 3306800000 441120000 846180000 305930000 58714000 39226000 77339000 118370000 80784000 87557000 229390000 229030000 173060000 132760000 128160000 359160000 22928 570 20938 192504;192505;192506;192507;192508;192509;192510;192511;192512;192513;192514;192515;192516;192517;192518;192519;192520;192521;192522;192523;192524;192525;192526;192527;192528;192529;192530;192531;192532;192533;192534;192535;192536;192537;192538;192539 153440;153441;153442;153443;153444;153445;153446;153447;153448;153449;153450;153451;153452;153453;153454;153455;153456;153457;153458;153459;153460;153461;153462;153463;153464 153458 15 IDRPEAISEER Unmodified 1313.6575 0.65754307 5274 Q9Y6B6 SAR1B GTP-binding protein SAR1b yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 2 2 1 1 1 2 1 1 1 2 2 2 29.086 29.258 2;3 0.00025771 31610 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 74.987 41.763 962030000 0 0 0 62726000 53040000 38826000 71568000 54964000 50370000 74923000 94433000 91153000 104610000 73750000 191670000 22929 5274 20939 192540;192541;192542;192543;192544;192545;192546;192547;192548;192549;192550;192551;192552;192553;192554;192555;192556;192557 153465;153466;153467;153468;153469;153470;153471;153472;153473;153474;153475;153476;153477;153478;153479 153466 14 IDRPEAISEERLR Unmodified 1582.8427 0.84271808 5274 Q9Y6B6 SAR1B GTP-binding protein SAR1b yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 21 2 2 2 2 1 2 2 2 2 1 1 2 40.796 40.962 3;4 0.001637 45358 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 62.042 31.08 372510000 0 0 0 14470000 11957000 27051000 26302000 16981000 26587000 35607000 41451000 53139000 14847000 10068000 94054000 22930 5274 20940 192558;192559;192560;192561;192562;192563;192564;192565;192566;192567;192568;192569;192570;192571;192572;192573;192574;192575;192576;192577;192578 153480;153481;153482;153483;153484;153485;153486 153482 6 IDRTDAISEEK Unmodified 1275.6307 0.63065962 4589 Q9NR31 SAR1A GTP-binding protein SAR1a yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 4 2 24 4 2 2 2 2 2 2 2 2 2 2 2 2 2 20.389 19.834 2;3 3.6298E-15 20133 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 189.57 111.24 5249200000 0 904620000 71027000 255460000 216550000 270420000 328680000 292630000 221830000 388130000 544930000 454590000 387800000 346100000 566420000 22931 4589 20941 192579;192580;192581;192582;192583;192584;192585;192586;192587;192588;192589;192590;192591;192592;192593;192594;192595;192596;192597;192598;192599;192600;192601;192602;192603;192604;192605;192606;192607;192608 153487;153488;153489;153490;153491;153492;153493;153494;153495;153496;153497;153498;153499;153500;153501;153502;153503;153504;153505;153506;153507;153508;153509;153510;153511;153512;153513;153514;153515;153516 153510 23 IDRTEFIPSTDPFQK Unmodified 1792.8996 0.89956426 4414 Q9H6E4 CCDC134 Coiled-coil domain-containing protein 134 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 76.113 75.967 3 0.0052072 87714 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 39.517 22.987 93742000 0 0 6885000 0 3914000 9466300 7779900 8047400 8478500 10647000 0 11660000 6933700 5254600 14676000 22932 4414 20942 192609;192610;192611;192612;192613;192614;192615;192616;192617;192618;192619 153517;153518;153519;153520;153521;153522 153518 6 IDSANMNDDITTSLR Oxidation (M) 1680.7625 0.76247843 5110 Q9Y2L1 DIS3 Exosome complex exonuclease RRP44 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 49.362 49.458 2 4.0007E-05 56064 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 83.182 69.829 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22933 5110 20943 192620;192621;192622 153523;153524;153525 153523 6501 3 IDSAPLALLHK Unmodified 1176.6867 0.68665836 210 O14757 CHEK1 Serine/threonine-protein kinase Chk1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 71.624 70.838 3 0.025336 88224 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 40.496 25.817 100970000 26643000 0 10022000 2857300 2809400 9570900 3624100 3678100 4847200 6242300 6785300 6932800 0 6411400 10547000 22934 210 20944 192623;192624;192625;192626;192627;192628;192629;192630;192631;192632;192633;192634;192635 153526;153527;153528 153528 3 IDSDISGTLK Unmodified 1047.5448 0.54480473 5095 Q9Y2B0 CNPY2 Protein canopy homolog 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 42.585 42.761 2 0.00088144 46634 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 118.18 54.698 108140000 0 0 0 1514800 3851700 0 4286300 5344800 0 4852200 17878000 19822000 0 13196000 37398000 22935 5095 20945 192636;192637;192638;192639;192640;192641;192642;192643;192644 153529;153530;153531;153532;153533;153534;153535;153536 153533 8 IDSDLGDAWAFFYK Unmodified 1646.7617 0.76167379 601 O94906 PRPF6 Pre-mRNA-processing factor 6 yes yes 0 0 0 By MS/MS 2 0 1 1 98.147 90.017 2 0.00093078 116189 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 112.13 87.334 10828000 10828000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22936 601 20946 192645 153537;153538 153538 2 IDSEGGVSANHTSR Unmodified 1428.6593 0.65933399 1667 P51659 HSD17B4 Peroxisomal multifunctional enzyme type 2;(3R)-hydroxyacyl-CoA dehydrogenase;Enoyl-CoA hydratase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 2 1 1 1 2 2 1 2 2 2 2 11.505 11.655 2;3 0.007424 10827 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 51.643 33.019 101880000 0 0 0 9668300 9158300 10574000 8135300 10736000 7957500 8838900 0 15465000 6972900 6123700 8252000 22937 1667 20947 192646;192647;192648;192649;192650;192651;192652;192653;192654;192655;192656;192657;192658;192659;192660;192661;192662;192663 153539;153540;153541;153542;153543;153544;153545;153546;153547;153548 153540 5 IDSFHITGLPDNSEK Unmodified 1671.8104 0.8104149 3970 Q96RL7 VPS13A Vacuolar protein sorting-associated protein 13A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 69.732 69.963 3 0.00096938 80406 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 51.073 38.541 55206000 0 0 0 0 0 0 6572200 11874000 9962200 0 9843900 16954000 0 0 0 22938 3970 20948 192664;192665;192666;192667;192668 153549;153550;153551 153551 3 IDSIADHVNSAAVNVEEGTK Unmodified 2068.0073 0.0072768075 1789 P56962 STX17 Syntaxin-17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 62.936 62.967 3 8.6403E-08 71839 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 70.414 45.62 43278000 0 0 0 12712000 0 7993100 6926000 0 5198700 0 0 0 0 0 10448000 22939 1789 20949 192669;192670;192671;192672;192673;192674 153552;153553;153554;153555;153556;153557 153557 6 IDSILEVVQTGR Unmodified 1328.73 0.72997974 4783 Q9NZW5 MPP6 MAGUK p55 subfamily member 6 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 81.949 82.089 2 0.0076266 94784 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 70.028 12.439 22147000 0 0 0 0 0 2752300 1902400 0 0 0 3148900 4062500 0 2965300 7316200 22940 4783 20950 192675;192676;192677;192678;192679;192680 153558;153559;153560 153559 0 IDSIPHLNNSTPLVDPSVYGYGVQK Unmodified 2712.3759 0.37589549 3873 Q96I24 FUBP3 Far upstream element-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 83.651 83.789 3 9.6917E-13 97023 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 61.736 50.213 75746000 0 0 0 0 0 6835600 0 0 0 0 19683000 0 0 0 49227000 22941 3873 20951 192681;192682;192683;192684 153561;153562;153563 153562 3 IDSLSAQLSQLQK Unmodified 1429.7777 0.77765821 757 P02545 LMNA Prelamin-A/C;Lamin-A/C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 74.245 74.185 2 1.8098E-11 85491 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 120.09 81.787 42741000 0 0 0 6393900 3661000 5931000 0 8668600 0 0 0 10588000 0 7498300 0 22942 757 20952 192685;192686;192687;192688;192689;192690 153564;153565;153566;153567;153568;153569 153564 6 IDSLTESIAQLEK Unmodified 1445.7613 0.76133944 3595 Q8WXW3 PIBF1 Progesterone-induced-blocking factor 1 yes yes 0 0 0 By MS/MS 2 0 1 1 85.713 80.939 2 0.020378 100567 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 63.408 33.935 31439000 0 31439000 0 0 0 0 0 0 0 0 0 0 0 0 0 22943 3595 20953 192691 153570 153570 1 IDSNLDELSMGLGR Oxidation (M) 1534.7297 0.72972174 683 O95721 SNAP29 Synaptosomal-associated protein 29 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 74.602 74.674 2 1.1179E-16 86370 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 121.68 102.72 163940000 0 0 0 5911700 9382900 0 12026000 11757000 10617000 14307000 18762000 30204000 12170000 16228000 22575000 22944 683 20954 192692;192693;192694;192695;192696;192697;192698;192699;192700;192701;192702 153571;153572;153573;153574;153575;153576;153577;153578;153579;153580 153579 823 9 IDSNLDELSMGLGR Unmodified 1518.7348 0.73480712 683 O95721 SNAP29 Synaptosomal-associated protein 29 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 79.837 80.026 2 1.424E-16 92215 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 122.18 105.01 25960000 0 0 0 0 0 0 1989400 0 0 0 4917200 5810600 0 0 13242000 22945 683 20954 192703;192704;192705;192706;192707 153581;153582;153583;153584;153585;153586 153582 6 IDSPGFKPASQQK Unmodified 1401.7252 0.72522871 2136 Q07157 TJP1 Tight junction protein ZO-1 yes yes 0 0 1 By MS/MS 10 0 1 1 29.869 29.556 3 0.014977 32429 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 37.146 21.008 3597400 0 0 0 3597400 0 0 0 0 0 0 0 0 0 0 0 22946 2136 20955 192708 153587 153587 1 IDSQRDFTVASPAEFVTR Unmodified 2038.012 0.011968255 2231 Q13085 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 76.91 77.052 3 0.0061292 88922 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 32.121 22.372 22760000 0 0 0 0 0 4629100 0 0 0 3984000 0 4606200 0 1806400 7734400 22947 2231 20956 192709;192710;192711;192712;192713 153588;153589 153588 2 IDSRLEQYTSAIEGTK Unmodified 1809.9109 0.91085723 2117 Q05682 CALD1 Caldesmon yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8 3.46 3 9 1 1 1 1 1 1 1 1 1 1 1 1 72.064 70.885 3 3.4157E-05 87044 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 95.197 79.313 187930000 19600000 92894000 26086000 0 0 3999500 0 3659600 4949700 4959900 6377600 6178100 4044300 4849300 10330000 22948 2117 20957 192714;192715;192716;192717;192718;192719;192720;192721;192722;192723;192724;192725 153590;153591;153592;153593;153594;153595 153595 6 IDSTPVK Unmodified 758.41742 0.41741937 4338 Q9H0U4;Q92928 RAB1B;RAB1C Ras-related protein Rab-1B;Putative Ras-related protein Rab-1C yes no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 14.178 14.241 2 0.024152 13831 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 83.377 23.019 46504000 0 0 0 0 4149900 9503200 5015000 6089800 0 0 0 0 9708500 12038000 0 22949 4338 20958 192726;192727;192728;192729;192730;192731 153596;153597;153598 153596 3 IDSWENAEDFLEK Unmodified 1594.7151 0.71511753 2345 Q13823 GNL2 Nucleolar GTP-binding protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 86.418 81.643 2 0.002126 101532 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.288 69.749 14331000 0 14331000 0 0 0 0 0 0 0 0 0 0 0 0 0 22950 2345 20959 192732 153599 153599 1 IDSYLEK Unmodified 866.43855 0.43854874 2933 Q6P3X3 TTC27 Tetratricopeptide repeat protein 27 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 29.79 30.094 2 0.034305 32548 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 71.342 6.585 50198000 0 0 0 0 3240900 0 0 2990700 0 8320700 5401600 6657100 7482300 5967800 10137000 22951 2933 20960 192733;192734;192735;192736;192737;192738;192739;192740 153600 153600 1 IDTASPLNPEAAVLYEK Unmodified 1829.9411 0.94109472 4454 Q9H8T0 AKTIP AKT-interacting protein yes yes 0 0 0 By MS/MS 2 0 1 1 84.682 79.939 2 6.5368E-05 99347 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.12 100.96 117620000 0 117620000 0 0 0 0 0 0 0 0 0 0 0 0 0 22952 4454 20961 192741 153601 153601 1 IDTGWLDR Unmodified 974.48214 0.48214489 2231 Q13085 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 61.95 62.169 2 0.025292 71043 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 58.815 18.712 30475000 0 0 0 0 0 4871900 2007000 2622100 0 3742400 4057500 0 3910200 3361200 5902400 22953 2231 20962 192742;192743;192744;192745;192746;192747;192748;192749 153602;153603;153604 153604 3 IDTHNIIVNQLVFPDPEK Unmodified 2091.1001 0.10005498 353 O43681 ASNA1 ATPase ASNA1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 90.03 86.501 2;3 0.00087679 104708 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 52.298 48.578 34131000 1091900 22975000 10063000 0 0 0 0 0 0 0 0 0 0 0 0 22954 353 20963 192750;192751;192752;192753;192754 153605;153606;153607;153608;153609 153609 4 IDTHPSPSHSSTVK Unmodified 1491.7318 0.73177065 3465 Q8NI27 THOC2 THO complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 12.815 12.088 3 0.00024701 15945 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.834 48.82 296040000 99255000 45363000 40636000 6048500 6556800 10875000 7999700 8721500 7125800 12274000 5371400 13306000 10464000 9729100 12317000 22955 3465 20964 192755;192756;192757;192758;192759;192760;192761;192762;192763;192764;192765;192766;192767;192768;192769;192770 153610;153611;153612;153613;153614;153615;153616;153617;153618;153619;153620;153621;153622;153623 153612 12 IDTIEIITDR Unmodified 1187.6398 0.63976774 1141 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75.259 75.13 2 4.0959E-10 86832 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 163.32 114.76 2103500000 582950 283520 1453400 71703000 70322000 87378000 105360000 104930000 93425000 152240000 270770000 375660000 95099000 184370000 489930000 22956 1141 20965 192771;192772;192773;192774;192775;192776;192777;192778;192779;192780;192781;192782;192783;192784;192785 153624;153625;153626;153627;153628;153629;153630;153631;153632;153633;153634;153635;153636 153629 11 IDTIEIITDRQSGK Unmodified 1587.8468 0.84680041 1141 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.36 3.74 1 8 2 22 3 4 4 2 1 1 2 2 2 2 2 2 2 2 2 67.411 66.077 2;3 4.4981E-194 95074 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 308.91 247.15 2058100000 409250000 264610000 941870000 17241000 10518000 1976100 26442000 21576000 29590000 43575000 56944000 62258000 24107000 38232000 109870000 22957 1141 20966 192786;192787;192788;192789;192790;192791;192792;192793;192794;192795;192796;192797;192798;192799;192800;192801;192802;192803;192804;192805;192806;192807;192808;192809;192810;192811;192812;192813;192814;192815;192816;192817;192818 153637;153638;153639;153640;153641;153642;153643;153644;153645;153646;153647;153648;153649;153650;153651;153652;153653;153654;153655;153656;153657;153658;153659;153660;153661;153662 153647 23 IDTIEIITDRQSGKK Unmodified 1715.9418 0.94176342 1141 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes yes 0 0 2 By MS/MS 2 0 1 1 67.337 59.042 3 0.030633 79081 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.777 37.093 25962000 25962000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22958 1141 20967 192819 153663 153663 1 IDTMGTYHGMTLK Oxidation (M) 1482.6847 0.6846858 2916 Q6P1J9 CDC73 Parafibromin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 6.67 3.94 10 14 3 3 4 1 1 2 1 2 1 2 1 1 1 1 45.978 43.706 2;3 1.3498E-06 57413 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 102.87 87.711 659520000 179840000 150180000 75436000 9526900 13499000 29922000 12842000 28042000 15301000 36271000 16047000 0 29983000 24834000 37794000 22959 2916 20968 192820;192821;192822;192823;192824;192825;192826;192827;192828;192829;192830;192831;192832;192833;192834;192835;192836;192837;192838;192839;192840;192841;192842;192843 153664;153665;153666;153667;153668;153669;153670;153671;153672;153673;153674;153675;153676;153677;153678;153679;153680;153681;153682;153683;153684;153685 153681 4543;4544 20 IDTMGTYHGMTLK Unmodified 1466.6898 0.68977118 2916 Q6P1J9 CDC73 Parafibromin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.65 3.65 5 12 2 1 2 1 1 1 1 1 1 1 1 1 1 1 1 57.432 55.756 2;3 1.2129E-17 76056 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 127.42 93.037 478700000 144670000 104500000 27221000 5603500 8190000 9986700 8461200 16245000 7971600 14056000 26380000 22731000 16435000 23884000 42374000 22960 2916 20968 192844;192845;192846;192847;192848;192849;192850;192851;192852;192853;192854;192855;192856;192857;192858;192859;192860 153686;153687;153688;153689;153690;153691;153692;153693;153694;153695;153696;153697;153698;153699;153700 153694 14 IDTMGTYHGMTLK 2 Oxidation (M) 1498.6796 0.67960042 2916 Q6P1J9 CDC73 Parafibromin yes yes 0 2 0 By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 31.64 30.534 2 0.00018628 33085 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 77.379 62.407 59561000 6526300 12459000 7567000 0 0 0 2252700 2155900 2757000 3412500 4208000 7669600 6362100 4191000 0 22961 2916 20968 192861;192862;192863;192864;192865;192866;192867;192868;192869;192870;192871 153701;153702 153702 4543;4544 2 IDTTSFLANLK Unmodified 1221.6605 0.66050319 3453 Q8NG31 CASC5 Protein CASC5 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 83.558 83.451 2 0.0057542 96704 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 72.607 45.353 4166900 0 0 0 0 1816000 2350900 0 0 0 0 0 0 0 0 0 22962 3453 20969 192872;192873 153703;153704 153703 2 IDVAFVDR Unmodified 933.49198 0.4919813 2557 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.392 62.489 2 0.0061172 71193 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 119.29 71.375 396970000 0 0 0 22358000 20798000 46546000 26546000 27963000 17528000 44459000 33710000 49678000 30173000 30704000 46504000 22963 2557 20970 192874;192875;192876;192877;192878;192879;192880;192881;192882;192883;192884;192885 153705;153706;153707;153708;153709;153710;153711;153712 153711 4 IDVAFVDRADIK Unmodified 1360.7351 0.73506511 2557 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.76 3.89 1 4 2 10 3 2 2 1 1 1 1 1 1 1 1 1 1 74.121 72.93 2;3 0.00020098 95248 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 102.05 55.919 390450000 187330000 67131000 73284000 1608900 0 6537600 2828300 4756200 3932000 10324000 9418200 0 4785100 6390000 12123000 22964 2557 20971 192886;192887;192888;192889;192890;192891;192892;192893;192894;192895;192896;192897;192898;192899;192900;192901;192902 153713;153714;153715;153716;153717;153718;153719;153720;153721;153722;153723;153724;153725;153726;153727;153728;153729;153730;153731 153723 17 IDVDAPDIDIHGPDAK Unmodified 1689.821 0.82097959 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.21 3.66 4 3 12 3 4 1 1 1 1 1 1 1 1 1 1 1 1 71.658 70.156 2;3 0.00025509 88041 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.651 62.576 506850000 73527000 289450000 0 9100600 7705100 13002000 6249300 11710000 11046000 8641700 8774400 19826000 9872000 10552000 27397000 22965 2172 20972 192903;192904;192905;192906;192907;192908;192909;192910;192911;192912;192913;192914;192915;192916;192917;192918;192919;192920;192921 153732;153733;153734;153735;153736;153737;153738;153739;153740;153741;153742;153743;153744;153745;153746 153734 9 IDVDTNFPECVVDAGK Unmodified 1777.8193 0.81926503 2165 Q08AF3 SLFN5 Schlafen family member 5 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 80.636 80.686 2 0.00014151 93566 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 68.069 52.179 17893000 0 0 0 0 2314400 4293000 0 3247000 3071500 0 0 0 2037800 2928900 0 22966 2165 20973 192922;192923;192924;192925;192926;192927;192928 153747;153748;153749;153750 153749 4 IDVEDILCK Unmodified 1103.5533 0.55326092 3485 Q8TC07 TBC1D15 TBC1 domain family member 15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79.707 79.241 2 0.0032866 91215 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.267 50.398 264970000 0 130030000 2318200 0 5671300 12180000 8200000 10925000 8949500 12453000 13620000 17079000 12335000 10114000 21091000 22967 3485 20974 192929;192930;192931;192932;192933;192934;192935;192936;192937;192938;192939;192940;192941;192942 153751;153752;153753;153754;153755;153756;153757;153758;153759;153760;153761;153762;153763 153754 13 IDVEILR Unmodified 856.50182 0.5018177 2160 Q08554 DSC1 Desmocollin-1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.526 67.608 2 0.01917 78668 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 110.61 33.765 112110000 0 0 0 26355000 7323700 8670300 6909100 14217000 5630300 6198600 6440200 12525000 5363700 5180300 7297400 22968 2160 20975 192943;192944;192945;192946;192947;192948;192949;192950;192951;192952;192953;192954 153764;153765 153765 2 IDVFSPVEFNK Unmodified 1293.6605 0.66050319 4924 Q9UID3 VPS51 Vacuolar protein sorting-associated protein 51 homolog yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 82.299 82.439 2 0.0020604 95410 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 81.338 57.183 43295000 0 0 0 0 0 4080400 1867500 4096400 2109000 4536300 2818100 4885700 6975000 5272800 6653700 22969 4924 20976 192955;192956;192957;192958;192959;192960;192961;192962;192963;192964 153766;153767;153768;153769;153770;153771;153772 153767 7 IDVGEAEPR Unmodified 984.48762 0.4876242 1740 P54577 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 32.392 32.592 2 0.0089221 34409 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.224 26.721 298800000 0 0 0 12337000 10113000 24616000 0 11502000 10167000 20038000 34085000 48570000 16250000 25497000 85629000 22970 1740 20977 192965;192966;192967;192968;192969;192970;192971;192972;192973;192974;192975 153773;153774;153775;153776;153777;153778;153779;153780;153781;153782;153783 153774 6 IDVLLQQIEELGSEGK Unmodified 1769.9411 0.94109472 630 O95232 LUC7L3 Luc7-like protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.25 3.34 2 1 1 1 2 1 95.871 93.227 2 1.2249E-57 115025 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 208.27 178.34 71421000 0 68926000 0 0 0 0 0 0 0 2494300 0 0 0 0 0 22971 630 20978 192976;192977;192978;192979 153784;153785;153786;153787 153785 4 IDVLQAEVAALK Unmodified 1268.734 0.73400248 3959 Q96QF0 RAB3IP Rab-3A-interacting protein yes yes 0 0 0 By MS/MS 2 0 1 1 88.878 84.005 2 0.0029713 104392 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.261 52.094 15833000 0 15833000 0 0 0 0 0 0 0 0 0 0 0 0 0 22972 3959 20979 192980 153788 153788 1 IDVPTADVDVNLTPDK Unmodified 1710.8676 0.86759543 1738 P54277 PMS1 PMS1 protein homolog 1 yes yes 0 0 0 By MS/MS 2 0 1 1 82.042 77.337 2 0.021067 96379 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 57.106 38.795 41206000 0 41206000 0 0 0 0 0 0 0 0 0 0 0 0 0 22973 1738 20980 192981 153789 153789 1 IDVPTLGPK Unmodified 938.54368 0.54368251 2150 Q08188 TGM3 Protein-glutamine gamma-glutamyltransferase E;Protein-glutamine gamma-glutamyltransferase E 50 kDa catalytic chain;Protein-glutamine gamma-glutamyltransferase E 27 kDa non-catalytic chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 63.486 62.813 2 0.0051376 71575 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 82.452 56.229 204680000 0 16998000 0 0 11044000 11879000 13423000 47762000 7189600 19668000 19255000 29009000 12170000 10223000 6058300 22974 2150 20981 192982;192983;192984;192985;192986;192987;192988;192989;192990;192991;192992;192993;192994 153790;153791;153792;153793;153794;153795;153796;153797;153798;153799;153800;153801;153802;153803;153804 153798 15 IDVQESFCMEEK Oxidation (M) 1529.6378 0.63779519 671 O95602 POLR1A DNA-directed RNA polymerase I subunit RPA1 yes yes 0 1 0 By MS/MS 2 0 1 1 57.203 51.381 2 1.0548E-08 66328 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.63 113.25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22975 671 20982 192995 153805 153805 814 1 IDVSIEAASGGK Unmodified 1145.5928 0.59281755 890 P09622 DLD Dihydrolipoyl dehydrogenase, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 55.221 49.407 2 0.045979 63745 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 56.548 26.381 125090000 0 125090000 0 0 0 0 0 0 0 0 0 0 0 0 0 22976 890 20983 192996 153806 153806 1 IDVSVAAGHTDR Unmodified 1239.6208 0.62076364 2689 Q4V328 GRIPAP1 GRIP1-associated protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 34.238 34.546 3 0.034215 36735 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 25.178 14.272 49552000 0 0 0 0 0 0 0 0 0 0 0 0 0 49552000 0 22977 2689 20984 192997 153807 153807 1 IDVTAPDVSIEEPEGK Unmodified 1697.836 0.83596095 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 73.042 71.982 2 1.4045E-29 82796 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 166.04 151.62 660090000 10212000 74159000 0 27893000 41099000 38640000 50088000 51986000 37774000 45103000 35929000 74029000 55520000 53879000 63777000 22978 2172 20985 192998;192999;193000;193001;193002;193003;193004;193005;193006;193007;193008;193009;193010;193011;193012 153808;153809;153810;153811;153812;153813;153814;153815;153816;153817;153818;153819;153820;153821;153822;153823;153824;153825 153813 18 IDYIAGLDSR Unmodified 1121.5717 0.57168818 847 P07741 APRT Adenine phosphoribosyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.381 65.469 2 0.0018051 74992 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 88.496 60.321 120490000 0 0 0 5051800 4243800 7157600 8210500 10060000 3079500 10209000 12917000 18440000 5003600 9713800 26403000 22979 847 20986 193013;193014;193015;193016;193017;193018;193019;193020;193021;193022;193023;193024 153826;153827;153828;153829;153830;153831;153832;153833;153834;153835;153836;153837 153830 12 IDYVLQEK Unmodified 1006.5335 0.53351176 5301 Q9Y6Y8 SEC23IP SEC23-interacting protein no no 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 46.98 47.431 2 0.0099856 53337 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 81.119 28.888 18066000 0 0 0 0 0 0 0 0 0 5458300 7125400 5482400 0 0 0 22980 5301 20987 193025;193026;193027 153838;153839 153839 2 IEADATDNGDQDPVTTPLR Unmodified 2026.9443 0.9443422 2867 Q6BDS2 UHRF1BP1 UHRF1-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 57.052 57.245 2 4.289E-50 64345 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 170.52 162.8 125790000 0 0 0 0 11002000 10095000 8457600 16143000 5725400 11467000 14639000 13526000 11068000 8014700 15650000 22981 2867 20988 193028;193029;193030;193031;193032;193033;193034;193035;193036;193037;193038 153840;153841;153842;153843;153844;153845;153846;153847;153848;153849;153850;153851 153843 12 IEADSESQEDIIR Unmodified 1503.7053 0.70528113 1777 P55957 BID BH3-interacting domain death agonist;BH3-interacting domain death agonist p15;BH3-interacting domain death agonist p13;BH3-interacting domain death agonist p11 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 45.466 45.815 2 0.00046698 50483 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 96.015 60.601 9795100 0 0 0 0 0 0 0 0 0 0 5640500 0 0 4154600 0 22982 1777 20989 193039;193040 153852;153853 153853 2 IEAEDFTSR Unmodified 1066.4931 0.49310351 137 O00268 TAF4 Transcription initiation factor TFIID subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 24.915 25.21 2 0.0088535 26036 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 68.422 42.595 43472000 0 0 0 0 0 0 3511800 0 2307800 9646600 12853000 15152000 0 0 0 22983 137 20990 193041;193042;193043;193044;193045 153854;153855;153856;153857 153857 4 IEAELQDICNDVLELLDK Unmodified 2129.0562 0.056200835 1311 P31946 YWHAB 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.5 0.5 4 4 2 5 1 101.61 97.784 2;3 1.112E-63 117366 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 195.54 177.46 398160000 20357000 373650000 4153500 0 0 0 0 0 0 0 0 0 0 0 0 22984 1311 20991 193046;193047;193048;193049;193050;193051;193052;193053 153858;153859;153860;153861;153862;153863;153864;153865;153866;153867;153868 153865 10 IEAFRASLSK Unmodified 1120.6241 0.6240581 733;837 P00558;P07205 PGK1;PGK2 Phosphoglycerate kinase 1;Phosphoglycerate kinase 2 no no 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 50.698 44.81 2 6.6346E-08 61433 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 157.75 87.221 369290000 331700000 34677000 2921100 0 0 0 0 0 0 0 0 0 0 0 0 22985 733;837 20992 193054;193055;193056 153869;153870;153871;153872 153871 4 IEAFTPLLAPAQEPVTLLGQIGCDSNGK Unmodified 2938.511 0.51100876 2385 Q14181 POLA2 DNA polymerase alpha subunit B yes yes 0 0 0 By MS/MS 3 0 1 1 98.722 95.371 3 2.597E-07 114416 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 50.505 47.607 4260900 0 4260900 0 0 0 0 0 0 0 0 0 0 0 0 0 22986 2385 20993 193057 153873 153873 1 IEAGYIQTGDR Unmodified 1221.599 0.59896556 5184 Q9Y450 HBS1L HBS1-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 38.994 39.735 2 0.0040831 43169 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.387 44.817 8772400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8772400 22987 5184 20994 193058;193059;193060;193061 153874;153875;153876;153877 153875 4 IEAINQAIANEYEVR Unmodified 1731.8792 0.87916317 3407 Q8NCA5 FAM98A Protein FAM98A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 75.217 75.341 2 1.1758E-26 86930 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 138.75 122.5 92649000 0 0 0 0 6268900 0 9210500 8266900 6786500 10825000 10681000 11944000 6203400 8024200 14439000 22988 3407 20995 193062;193063;193064;193065;193066;193067;193068;193069;193070;193071 153878;153879;153880;153881;153882;153883;153884;153885;153886 153885 8 IEALEQENSELERENRK Unmodified 2086.0291 0.029074882 2676 Q3V6T2 CCDC88A Girdin yes yes 0 0 2 By MS/MS 2 0 1 1 44.411 40.641 4 0.0064069 51312 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 39.517 30.353 5501700 0 0 5501700 0 0 0 0 0 0 0 0 0 0 0 0 22989 2676 20996 193072 153887 153887 1 IEALQNHENESVYK Unmodified 1672.8057 0.80566387 1682 P52292 KPNA2 Importin subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.69 2.88 3 2 24 1 3 1 2 2 2 2 2 2 2 2 2 2 2 2 37.95 37.233 2;3 8.4576E-30 46872 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 112.15 105.72 2643700000 48359000 783020000 160660000 75176000 66388000 148030000 87476000 100950000 96538000 129810000 150080000 277080000 154580000 133010000 232520000 22990 1682 20997 193073;193074;193075;193076;193077;193078;193079;193080;193081;193082;193083;193084;193085;193086;193087;193088;193089;193090;193091;193092;193093;193094;193095;193096;193097;193098;193099;193100;193101 153888;153889;153890;153891;153892;153893;153894;153895;153896;153897;153898;153899;153900;153901;153902;153903;153904;153905;153906;153907;153908;153909;153910;153911 153905 23 IEANVNSVVTEEK Unmodified 1430.7253 0.72528829 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 49.087 49.428 2 0.0016608 62042 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.923 56.669 87503000 0 0 0 0 0 0 0 0 16979000 19171000 0 0 17552000 0 33801000 22991 3443 20998 193102;193103;193104;193105;193106 153912;153913;153914;153915 153913 4 IEATGVIQSCAK Unmodified 1275.6493 0.64928657 2502 Q15154 PCM1 Pericentriolar material 1 protein yes yes 0 0 0 By MS/MS 2 0 1 1 47.191 41.628 2 0.006533 54339 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.412 31.449 7627300 0 7627300 0 0 0 0 0 0 0 0 0 0 0 0 0 22992 2502 20999 193107 153916 153916 1 IEAVEMHLTR Unmodified 1197.6176 0.61759251 4973 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 50.203 50.276 3 0.002624 55672 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.439 54.551 122750000 0 0 0 9340100 12355000 0 10867000 0 0 16119000 19063000 0 18658000 0 36351000 22993 4973 21000 193108;193109;193110;193111;193112;193113;193114 153917;153918;153919;153920;153921;153922;153923;153924;153925 153919 8 IEAVYVSR Unmodified 935.50763 0.50763136 3997 Q96T37 RBM15 Putative RNA-binding protein 15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.595 38.774 2 0.013378 41874 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.485 22.445 78611000 0 0 0 3729100 3531500 6173000 5318300 5418100 5368200 7068200 9618800 13057000 4804600 4528200 9996900 22994 3997 21001 193115;193116;193117;193118;193119;193120;193121;193122;193123;193124;193125;193126 153926;153927;153928;153929;153930;153931;153932;153933;153934 153929 9 IECDDKGDGSCDVR Unmodified 1624.6457 0.64573411 1124 P21333 FLNA Filamin-A no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.617 12.771 3 0.00024262 11769 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 75.669 48.26 78706000 0 0 0 7146900 5877100 3019300 6164200 7284200 1948600 5617800 8161200 6969300 7850700 8043100 10624000 22995 1124 21002 193127;193128;193129;193130;193131;193132;193133;193134;193135;193136;193137;193138 153935;153936;153937;153938;153939;153940;153941;153942;153943;153944;153945;153946 153945 12 IECLNDIK Unmodified 1003.5008 0.50083142 3616 Q92539 LPIN2 Phosphatidate phosphatase LPIN2 yes yes 0 0 0 By MS/MS 2 0 1 1 47.49 41.927 2 0.033952 54659 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.208 19.453 6887700 0 6887700 0 0 0 0 0 0 0 0 0 0 0 0 0 22996 3616 21003 193139 153947 153947 1 IEDASNPLLLK Unmodified 1211.6762 0.67615325 1560 P49137 MAPKAPK2 MAP kinase-activated protein kinase 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 70.702 65.999 2 0.001133 84292 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.62 74.846 152620000 0 151520000 1100400 0 0 0 0 0 0 0 0 0 0 0 0 22997 1560 21004 193140;193141 153948 153948 0 IEDDNDNAPYFEHR Unmodified 1733.7281 0.72814183 2160 Q08554 DSC1 Desmocollin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 2 2 2 1 2 1 2 1 2 1 1 2 42.061 42.184 2;3 6.6234E-14 46858 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 91.812 82.525 979350000 0 0 0 190180000 105670000 95977000 6017700 239570000 5108800 108480000 13196000 184000000 16188000 6008400 8958500 22998 2160 21005 193142;193143;193144;193145;193146;193147;193148;193149;193150;193151;193152;193153;193154;193155;193156;193157;193158;193159;193160 153949;153950;153951;153952;153953;153954;153955;153956;153957;153958;153959;153960;153961;153962;153963 153953 15 IEDEECVR Unmodified 1048.4495 0.44952413 2916 Q6P1J9 CDC73 Parafibromin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 17.059 17.359 2 0.017693 17320 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 65.252 25.149 14579000 0 0 0 0 836590 0 0 0 0 1653600 1535600 2496500 2833000 2749300 2474700 22999 2916 21006 193161;193162;193163;193164;193165;193166;193167 153964;153965 153965 2 IEDEECVRLDK Unmodified 1404.6555 0.65549416 2916 Q6P1J9 CDC73 Parafibromin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 34.266 34.457 2;3 1.9826E-07 38092 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 133.07 77.669 865210000 0 0 0 37375000 35127000 50691000 38194000 45860000 38571000 67948000 96835000 116350000 102530000 102470000 133260000 23000 2916 21007 193168;193169;193170;193171;193172;193173;193174;193175;193176;193177;193178;193179;193180;193181;193182;193183;193184;193185;193186;193187;193188;193189;193190;193191 153966;153967;153968;153969;153970;153971;153972;153973;153974;153975;153976;153977;153978;153979;153980;153981;153982 153967 13 IEDETQVSR Unmodified 1075.5146 0.51456723 2543 Q15528 MED22 Mediator of RNA polymerase II transcription subunit 22 yes yes 0 0 0 By MS/MS 10 0 1 1 16.137 16.102 2 0.03737 16031 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 64.485 23.912 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23001 2543 21008 193192 153983 153983 1 IEDFGVHCK Unmodified 1103.507 0.50697943 3684 Q92905 COPS5 COP9 signalosome complex subunit 5 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 36.364 32.234 2 0.00053503 42175 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.69 102.16 82144000 0 36805000 45339000 0 0 0 0 0 0 0 0 0 0 0 0 23002 3684 21009 193193;193194 153984;153985;153986;153987 153985 4 IEDFLER Unmodified 920.46035 0.46034682 1511 P46781 RPS9 40S ribosomal protein S9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 56.305 56.309 2 0.016142 64981 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 116.54 62.017 804370000 0 0 0 73405000 73499000 87946000 0 0 62736000 148950000 0 227080000 130750000 0 0 23003 1511 21010 193195;193196;193197;193198;193199;193200;193201 153988;153989;153990;153991 153991 3 IEDFLERR Unmodified 1076.5615 0.56145784 1511 P46781 RPS9 40S ribosomal protein S9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.707 47.87 2 6.4268E-11 53976 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 164.77 103.8 316090000 0 0 0 13789000 12770000 20085000 16329000 18965000 20117000 26317000 26295000 48775000 36704000 28484000 47462000 23004 1511 21011 193202;193203;193204;193205;193206;193207;193208;193209;193210;193211;193212;193213 153992;153993;153994;153995;153996;153997;153998;153999;154000;154001 154001 7 IEDGEDLK Unmodified 917.43419 0.43419164 2295 Q13459 MYO9B Unconventional myosin-IXb yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 19.363 19.538 2 0.013906 19588 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 71.342 2.1447 10082000 0 0 0 0 3586100 0 0 0 0 0 0 6495500 0 0 0 23005 2295 21012 193214;193215 154002;154003 154002 2 IEDGNDFGVAIQEK Unmodified 1533.7311 0.73110195 4987 Q9UL46 PSME2 Proteasome activator complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 7.16 3.73 5 2 12 1 5 1 1 1 1 1 1 1 1 1 1 1 1 1 64.06 61.886 2;3 1.3784E-100 71526 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 234.17 212.08 2938800000 45483000 2570500000 5188700 13850000 11164000 38957000 0 21494000 0 39563000 41353000 32657000 0 34502000 84096000 23006 4987 21013 193216;193217;193218;193219;193220;193221;193222;193223;193224;193225;193226;193227;193228;193229;193230;193231;193232;193233;193234 154004;154005;154006;154007;154008;154009;154010;154011;154012;154013;154014;154015;154016;154017;154018;154019;154020;154021;154022 154016 17 IEDGNNFGVAVQEK Unmodified 1518.7314 0.7314363 2127 Q06323 PSME1 Proteasome activator complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.651 51.799 2 6.3063E-117 57569 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 205.46 155.42 311720000 0 0 0 16101000 14121000 22059000 19777000 14344000 9012400 27418000 34980000 26403000 20614000 24906000 81983000 23007 2127 21014 193235;193236;193237;193238;193239;193240;193241;193242;193243;193244;193245;193246 154023;154024;154025;154026;154027;154028;154029;154030;154031;154032;154033;154034;154035;154036;154037;154038 154033 15 IEDIETFK Unmodified 993.50188 0.50187728 2649 Q2KHR3 QSER1 Glutamine and serine-rich protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 53.371 49.864 2 0.014574 64283 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.531 49.105 76349000 0 76258000 90485 0 0 0 0 0 0 0 0 0 0 0 0 23008 2649 21015 193247;193248;193249 154039;154040 154039 2 IEDILEVIEK Unmodified 1199.6649 0.66491986 2629 Q16719 KYNU Kynureninase yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 87.044 87.148 2 0.010453 101102 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 81.95 53.776 10383000 0 0 0 0 0 728280 0 0 0 0 0 0 0 1531500 8123100 23009 2629 21016 193250;193251;193252;193253 154041;154042 154042 1 IEDLEEGQQVIR Unmodified 1427.7256 0.72562264 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 55.322 55.58 2 9.2247E-34 63121 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 171.56 109.6 83663000 0 0 0 0 0 14394000 0 0 0 18314000 0 0 14120000 12730000 24104000 23010 2361 21017 193254;193255;193256;193257;193258;193259;193260 154043;154044;154045;154046;154047;154048;154049;154050 154049 8 IEDLENEIEEVK Unmodified 1458.709 0.70896952 4385 Q9H3R5 CENPH Centromere protein H yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.25 3.34 2 1 1 1 2 1 76.943 72.816 2 1.4094E-05 90997 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.49 81.425 69424000 0 69424000 0 0 0 0 0 0 0 0 0 0 0 0 0 23011 4385 21018 193261;193262;193263;193264 154051;154052;154053;154054;154055 154052 5 IEDLEQEIK Unmodified 1115.571 0.57101948 3242 Q8IWJ2 GCC2 GRIP and coiled-coil domain-containing protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 57.238 51.416 2 0.030573 66198 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.741 17.819 50274000 0 50274000 0 0 0 0 0 0 0 0 0 0 0 0 0 23012 3242 21019 193265 154056 154056 0 IEDLGAAMEEALILDNK Unmodified 1843.9237 0.9237301 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 2 2 96.917 91.524 2;3 1.2345E-13 114696 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 141.54 116.49 34507000 6299800 28207000 0 0 0 0 0 0 0 0 0 0 0 0 0 23013 2344 21020 193266;193267;193268;193269 154057;154058;154059 154057 2 IEDLLQSEENK Unmodified 1316.646 0.64597533 662 O95453 PARN Poly(A)-specific ribonuclease PARN yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 1 2 56.364 49.755 2 3.5711E-09 65028 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 139.39 112.45 336300000 7544500 328750000 0 0 0 0 0 0 0 0 0 0 0 0 0 23014 662 21021 193270;193271;193272 154060;154061 154060 2 IEDLRQCLNR Unmodified 1315.6667 0.66666797 3180 Q86W92 PPFIBP1 Liprin-beta-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.247 43.421 3 2.7578E-42 48559 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 165.83 141.49 576710000 0 0 0 32324000 21520000 36993000 45898000 20006000 45639000 46359000 70840000 81146000 62225000 42684000 71073000 23015 3180 21022 193273;193274;193275;193276;193277;193278;193279;193280;193281;193282;193283;193284 154062;154063;154064;154065;154066;154067;154068;154069;154070;154071;154072 154066 9 IEDLRSECSSDFGGK Unmodified 1698.7519 0.75191374 2463 Q14C86 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 41.983 41.188 3 6.4008E-05 46029 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 56.514 42.43 349980000 0 49517000 17455000 9840600 13724000 34732000 17695000 22081000 17598000 32721000 25880000 24680000 26961000 20150000 36947000 23016 2463 21023 193285;193286;193287;193288;193289;193290;193291;193292;193293;193294;193295;193296;193297;193298;193299 154073;154074;154075;154076;154077;154078;154079;154080;154081;154082 154076 8 IEDLSQEAQLAAAEK Unmodified 1614.8101 0.81008055 4269 Q9BZK3 NACAP1 Putative nascent polypeptide-associated complex subunit alpha-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.07 0.703 3 7 4 5 8 1 74.893 71.193 2;3 9.1592E-148 93535 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 275.63 210.81 945610000 129140000 814090000 2380900 0 0 0 0 0 0 0 0 0 0 0 0 23017 4269 21024 193300;193301;193302;193303;193304;193305;193306;193307;193308;193309;193310;193311;193312;193313 154083;154084;154085;154086;154087;154088;154089;154090;154091;154092;154093;154094;154095;154096;154097 154092 15 IEDLSQQAQLAAAEK Unmodified 1613.8261 0.82606496 112 Q13765;E9PAV3 NACA Nascent polypeptide-associated complex subunit alpha;Nascent polypeptide-associated complex subunit alpha, muscle-specific form yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.49 3.64 1 7 4 25 4 6 2 2 2 2 2 2 2 2 2 2 3 2 2 60.335 58.769 2;3 0 72580 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 282.89 194.21 9217200000 135310000 5814500000 11883000 200530000 172510000 173050000 205350000 170660000 129060000 248460000 438260000 451250000 205260000 265840000 595270000 23018 112 21025 193314;193315;193316;193317;193318;193319;193320;193321;193322;193323;193324;193325;193326;193327;193328;193329;193330;193331;193332;193333;193334;193335;193336;193337;193338;193339;193340;193341;193342;193343;193344;193345;193346;193347;193348;193349;193350 154098;154099;154100;154101;154102;154103;154104;154105;154106;154107;154108;154109;154110;154111;154112;154113;154114;154115;154116;154117;154118;154119;154120;154121;154122;154123;154124;154125;154126;154127;154128;154129;154130;154131;154132;154133;154134;154135;154136;154137;154138;154139;154140;154141;154142;154143;154144;154145;154146 154108 37 IEDPNQFVPLNTNPNEVLEK Unmodified 2309.1539 0.15394104 4874 Q9UEY8 ADD3 Gamma-adducin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.74 2 1 17 3 1 2 2 2 1 1 1 1 1 1 2 2 83.949 83.358 2;3 1.3242E-58 96740 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 104.84 99.71 453330000 0 221890000 0 2494800 11820000 14656000 10376000 16513000 17507000 26011000 29619000 26685000 14986000 19539000 41228000 23019 4874 21026 193351;193352;193353;193354;193355;193356;193357;193358;193359;193360;193361;193362;193363;193364;193365;193366;193367;193368;193369;193370 154147;154148;154149;154150;154151;154152;154153;154154;154155;154156;154157;154158;154159;154160;154161 154148 14 IEDSGENLETEPLESQDR Unmodified 2059.9182 0.91818703 1975 P78345 RPP38 Ribonuclease P protein subunit p38 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 54.486 54.848 2 8.5989E-20 61651 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 128.31 113.44 8035300 0 0 0 0 0 0 2048600 0 0 0 0 0 0 0 5986700 23020 1975 21027 193371;193372 154162 154162 1 IEDSTGLNRPGPAPLSSR Unmodified 1865.9595 0.95953875 4089 Q9BQ70 TCF25 Transcription factor 25 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 47.022 47.173 3 8.9891E-39 53064 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 136.34 97.337 274320000 0 0 0 23271000 18079000 23575000 22343000 17024000 16195000 24664000 29307000 37655000 0 22452000 39758000 23021 4089 21028 193373;193374;193375;193376;193377;193378;193379;193380;193381;193382;193383 154163;154164;154165;154166;154167;154168;154169;154170;154171;154172 154165 6 IEDSTGLNRPGPAPLSSRK Unmodified 1994.0545 0.054501772 4089 Q9BQ70 TCF25 Transcription factor 25 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 38.862 39.041 3;4 1.1287E-12 43300 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 79.97 61.831 484950000 0 0 0 17777000 23233000 44557000 34642000 20031000 27617000 45258000 50570000 49719000 52813000 38608000 80123000 23022 4089 21029 193384;193385;193386;193387;193388;193389;193390;193391;193392;193393;193394;193395;193396;193397;193398;193399;193400;193401;193402;193403;193404;193405;193406;193407 154173;154174;154175;154176;154177;154178;154179;154180;154181;154182;154183;154184;154185;154186 154175 6 IEDTGGSGGSYSIK Unmodified 1369.6361 0.63613893 2408 Q14457 BECN1 Beclin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 32.391 32.062 2 1.3166E-29 39818 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 143.17 111.8 65014000 0 37692000 0 0 2379500 2985100 0 0 0 0 3645000 3882100 3155500 3631000 7643200 23023 2408 21030 193408;193409;193410;193411;193412;193413;193414;193415;193416 154187;154188;154189;154190;154191;154192;154193;154194;154195;154196 154189 9 IEDTVFHVFDK Unmodified 1348.6663 0.66631685 5110 Q9Y2L1 DIS3 Exosome complex exonuclease RRP44 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 2 2 1 1 1 1 1 1 1 1 1 1 1 1 77.33 76.12 2;3 0.00023301 95908 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.001 64.955 371460000 61411000 112290000 47042000 5131800 3106600 28978000 7031600 9066400 9187900 13812000 10948000 15624000 9691500 10233000 27913000 23024 5110 21031 193417;193418;193419;193420;193421;193422;193423;193424;193425;193426;193427;193428;193429;193430;193431;193432;193433 154197;154198;154199;154200;154201;154202;154203;154204;154205;154206;154207;154208;154209;154210;154211;154212 154200 15 IEDVASHCLPQK Unmodified 1395.6816 0.68164933 3497 Q8TD26 CHD6 Chromodomain-helicase-DNA-binding protein 6 yes yes 0 0 0 By MS/MS 2 0 1 1 40.051 35.039 3 0.0032681 45625 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 47.429 31.539 17004000 0 17004000 0 0 0 0 0 0 0 0 0 0 0 0 0 23025 3497 21032 193434 154213 154213 1 IEDVGSDEEDDSGK Unmodified 1493.6005 0.60054128 862;2716 P08238;Q58FF8 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.61 3.11 1 2 15 2 1 1 1 2 1 1 1 1 1 1 1 2 2 24.551 24.554 2 1.812E-85 19703 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 194.5 186.58 414120000 77522000 20682000 0 14205000 8392700 41961000 18470000 17685000 12989000 36122000 36725000 22429000 20137000 31402000 55395000 23026 862;2716 21033 193435;193436;193437;193438;193439;193440;193441;193442;193443;193444;193445;193446;193447;193448;193449;193450;193451;193452 154214;154215;154216;154217;154218;154219;154220;154221;154222;154223;154224;154225;154226;154227;154228;154229;154230;154231;154232;154233 154226 20 IEDVLPFFPDFVTIDHFK Unmodified 2178.1037 0.10374338 4805 Q9P253 VPS18 Vacuolar protein sorting-associated protein 18 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 101.44 93.309 3 4.5791E-05 120113 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.97 73.989 13182000 13182000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23027 4805 21034 193453 154234 154234 1 IEDVPAPSTSADK Unmodified 1328.646 0.64597533 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 2 1 1 1 1 1 1 1 1 1 1 1 1 37.606 36.046 2 0.00018691 46902 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.353 86.863 381890000 28342000 23891000 1386900 14350000 0 0 17714000 15485000 20050000 0 39695000 0 32315000 44423000 144230000 23028 1564 21035 193454;193455;193456;193457;193458;193459;193460;193461;193462;193463;193464;193465;193466;193467 154235;154236;154237;154238;154239;154240;154241;154242;154243;154244;154245;154246;154247;154248;154249 154243 15 IEDVPAPSTSADKVESLDVDSEAK Unmodified 2501.2021 0.20207303 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.42 3.66 3 1 8 1 2 1 1 1 1 1 1 1 1 1 68.553 66.789 3 3.0157E-116 80837 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 167.57 160.12 1091000000 105070000 826080000 3933800 7787800 0 0 11803000 8244600 0 12981000 29949000 0 14094000 21128000 49904000 23029 1564 21036 193468;193469;193470;193471;193472;193473;193474;193475;193476;193477;193478;193479 154250;154251;154252;154253;154254;154255;154256;154257;154258;154259;154260;154261;154262;154263;154264 154258 14 IEDVTPIPSDSTR Unmodified 1428.7096 0.70963822 1883 P62263 RPS14 40S ribosomal protein S14 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.078 51.236 2 4.7132E-09 57976 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 112.13 84.112 301010000 0 0 0 20342000 17770000 0 17093000 21728000 14792000 24118000 34240000 32490000 39015000 22897000 56525000 23030 1883 21037 193480;193481;193482;193483;193484;193485;193486;193487;193488;193489;193490;193491 154265;154266;154267;154268;154269;154270;154271;154272;154273;154274;154275;154276;154277 154274 12 IEDVTPIPSDSTRR Unmodified 1584.8107 0.81074925 1883 P62263 RPS14 40S ribosomal protein S14 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 45.148 45.262 3 9.7553E-06 49766 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.285 51.853 57474000 0 0 0 6277400 3421600 0 8497200 0 0 4272700 6574200 0 8666000 8559100 11206000 23031 1883 21038 193492;193493;193494;193495;193496;193497;193498;193499 154278;154279;154280;154281;154282;154283 154279 6 IEDYFPEFAR Unmodified 1285.5979 0.59790293 1938 P63092;Q5JWF2 GNAS Guanine nucleotide-binding protein G(s) subunit alpha isoforms short;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.072 80.131 2 0.0013138 92251 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.69 82.918 125480000 0 0 0 4011200 4797400 11084000 6101800 7258700 8327100 11671000 9893700 14656000 10208000 9713300 27755000 23032 1938 21039 193500;193501;193502;193503;193504;193505;193506;193507;193508;193509;193510;193511 154284;154285;154286;154287;154288;154289;154290;154291;154292;154293;154294;154295 154287 11 IEEALGDK Unmodified 873.44436 0.4443624 991 P13929 ENO3 Beta-enolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.43 2.06 1 13 1 1 1 1 1 1 1 1 1 2 1 1 1 20.297 20.111 2 0.0215 25723 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.568 17.533 360050000 0 11574000 0 20853000 24431000 23364000 33861000 29670000 26260000 31759000 37192000 45412000 43081000 32598000 0 23033 991 21040 193512;193513;193514;193515;193516;193517;193518;193519;193520;193521;193522;193523;193524;193525 154296;154297;154298;154299 154296 4 IEEALQK Unmodified 829.45453 0.45453316 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 18.953 19.211 2 0.024641 19045 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 82.386 13.152 41060000 0 0 0 0 10078000 0 0 7641700 0 0 9105700 14234000 0 0 0 23034 3023 21041 193526;193527;193528;193529 154300 154300 1 IEEAMDGSETPQLFTVLPEK Oxidation (M) 2249.0773 0.077330208 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.67 1.6 1 23 1 2 2 2 2 2 2 2 2 2 2 1 2 84.726 84.585 2;3 6.4262E-82 104154 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 148.33 133.77 523990000 0 59526000 0 17001000 37273000 49500000 32054000 30006000 48879000 54049000 46528000 60058000 32807000 12598000 43716000 23035 2290 21042 193530;193531;193532;193533;193534;193535;193536;193537;193538;193539;193540;193541;193542;193543;193544;193545;193546;193547;193548;193549;193550;193551;193552;193553 154301;154302;154303;154304;154305;154306;154307;154308;154309;154310;154311;154312;154313;154314;154315;154316;154317;154318;154319;154320;154321;154322;154323;154324 154307 3737 23 IEEAMDGSETPQLFTVLPEK Unmodified 2233.0824 0.082415586 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 2 2 20 4 1 2 1 2 2 2 2 2 2 2 2 87.951 87.375 2;3 6.9522E-86 107952 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 196.67 187.62 443850000 0 341520000 0 0 2603100 7727200 2820200 7629400 6784400 10169000 11093000 12882000 6768300 9545800 24304000 23036 2290 21042 193554;193555;193556;193557;193558;193559;193560;193561;193562;193563;193564;193565;193566;193567;193568;193569;193570;193571;193572;193573;193574;193575;193576;193577 154325;154326;154327;154328;154329;154330;154331;154332;154333;154334;154335;154336;154337;154338;154339;154340;154341;154342 154329 18 IEECNQFTYK Unmodified 1330.5864 0.58635197 1439 P41247 PNPLA4 Patatin-like phospholipase domain-containing protein 4 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 41.286 41.572 2 0.031184 45957 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 53.493 42.342 29184000 0 0 0 0 1780000 3084600 0 0 0 3320300 3141600 5385100 4514700 3961800 3995800 23037 1439 21043 193578;193579;193580;193581;193582;193583;193584;193585 154343;154344 154343 2 IEEDFPHIR Unmodified 1154.572 0.57202253 4633 Q9NTI5 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.807 52.949 3 0.018397 59812 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 48.794 37.201 72404000 0 0 0 4989000 223340 6766700 5443300 4761200 5000800 14150000 4186300 8567000 4933700 4408100 8975000 23038 4633 21044 193586;193587;193588;193589;193590;193591;193592;193593;193594;193595;193596;193597 154345;154346 154345 2 IEEDSEVLMMIK 2 Oxidation (M) 1467.6837 0.68368275 442 O60888 CUTA Protein CutA yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.43 2.72 4 2 1 1 4 1 1 69.674 64.254 2 1.3046E-06 79052 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 114.5 84.242 134030000 6290600 124580000 3160000 0 0 0 0 0 0 0 0 0 0 0 0 23039 442 21045 193598;193599;193600;193601;193602;193603;193604 154347;154348;154349;154350;154351;154352;154353;154354 154351 566;567 8 IEEDSEVLMMIK Oxidation (M) 1451.6888 0.68876813 442 O60888 CUTA Protein CutA yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.29 0.452 5 2 1 5 1 83.048 78.57 2 4.4527E-23 97812 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 166.19 100.88 570710000 22194000 543590000 4921100 0 0 0 0 0 0 0 0 0 0 0 0 23040 442 21045 193605;193606;193607;193608;193609;193610;193611 154355;154356;154357;154358;154359;154360 154355 566;567 5 IEEDSEVLMMIK Unmodified 1435.6939 0.6938535 442 O60888 CUTA Protein CutA yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 3 1 86.869 82.182 2 8.3058E-15 103836 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 145.89 118.14 233330000 30960000 193540000 8832200 0 0 0 0 0 0 0 0 0 0 0 0 23041 442 21045 193612;193613;193614;193615;193616 154361;154362;154363;154364;154365;154366;154367;154368 154366 8 IEEDTENMAEK Unmodified 1307.5551 0.55511142 4473 Q9H9H4 VPS37B Vacuolar protein sorting-associated protein 37B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 22.35 22.545 2 0.00042226 22664 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.943 91.722 36846000 0 0 0 2119700 0 3002300 2722900 2646200 2397200 4334400 7047300 0 0 4526200 8049500 23042 4473 21046 193617;193618;193619;193620;193621;193622;193623;193624;193625 154369;154370;154371;154372;154373;154374 154370 6 IEEEEQEPEPPEPFEYIDD Unmodified 2332.9747 0.97469885 4011 Q99460 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.43 4.07 2 5 1 1 1 1 1 1 1 92.443 93.403 2;3 5.6859E-06 100753 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 71.085 67.766 115360000 33115000 60889000 0 2750800 4823300 5007300 0 0 0 0 0 8770900 0 0 0 23043 4011 21047 193626;193627;193628;193629;193630;193631;193632 154375;154376;154377;154378;154379 154379 5 IEEELAALQK Unmodified 1142.6183 0.61830402 4369 Q9H2K8 TAOK3 Serine/threonine-protein kinase TAO3 yes yes 0 0 0 By MS/MS 2 0 1 1 61.196 55.32 2 0.011538 71017 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.879 40.945 75337000 0 75337000 0 0 0 0 0 0 0 0 0 0 0 0 0 23044 4369 21048 193633 154380 154380 1 IEEELGSK Unmodified 903.45493 0.45492709 827 P06733 ENO1 Alpha-enolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.985 20.186 2 0.0063963 19498 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 120.46 19.715 2729000000 0 0 0 142100000 18160000 19721000 17426000 17290000 8872600 32034000 401030000 505020000 25691000 354060000 1187600000 23045 827 21049 193634;193635;193636;193637;193638;193639;193640;193641;193642;193643;193644;193645 154381;154382;154383;154384;154385;154386;154387;154388;154389;154390 154383 10 IEEEMLALQNER Unmodified 1473.7133 0.71334339 3057 Q7L7X3 TAOK1 Serine/threonine-protein kinase TAO1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 36.96 37.091 3 0.044989 40531 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 30.205 8.3325 77848000 0 0 0 5655900 3748900 7727900 4090500 4958300 4819000 7549500 9697200 12160000 10199000 7241300 0 23046 3057 21050 193646;193647;193648;193649;193650;193651;193652;193653;193654;193655;193656 154391 154391 1 IEEEVEK Unmodified 874.42838 0.42837799 3295 Q8IZH2 XRN1 5'-3' exoribonuclease 1 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 13.671 13.747 2 0.024937 13056 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 81.784 14.749 26498000 0 0 0 0 5564300 0 0 6705100 5332300 8896800 0 0 0 0 0 23047 3295 21051 193657;193658;193659;193660 154392 154392 1 IEEFLEAVLCPPRYPK Unmodified 1960.0128 0.012819878 140 O00299 CLIC1 Chloride intracellular channel protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 96.463 88.332 3 0.0036648 114069 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.403 43.873 22365000 22365000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23048 140 21052 193661 154393 154393 1 IEEFLEEVLCPPK Unmodified 1601.8011 0.80109577 5270 Q9Y696 CLIC4 Chloride intracellular channel protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 96.076 90.182 2;3 2.7138E-08 113725 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.94 86.631 99596000 54322000 43943000 1330700 0 0 0 0 0 0 0 0 0 0 0 0 23049 5270 21053 193662;193663;193664;193665 154394;154395;154396 154394 2 IEEFLSSFEEK Unmodified 1356.6449 0.6449127 375 O43847 NRD1 Nardilysin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 7 3.69 1 1 3 2 1 1 1 80.23 78.258 2 0.00045177 97150 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.83 18.13 136380000 0 125250000 0 0 0 4383200 0 0 0 0 0 0 0 6744000 0 23050 375 21054 193666;193667;193668;193669;193670 154397;154398;154399;154400;154401;154402 154398 6 IEEFVYEK Unmodified 1055.5175 0.51752734 5139 Q9Y371 SH3GLB1 Endophilin-B1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 2 50.482 50.219 2 0.0051643 56937 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 107.9 47.537 687430000 0 13352000 0 31725000 52630000 34652000 46434000 94302000 0 54297000 71891000 86597000 85522000 57273000 58760000 23051 5139 21055 193671;193672;193673;193674;193675;193676;193677;193678;193679;193680;193681;193682;193683 154403;154404;154405;154406;154407;154408;154409;154410;154411;154412;154413;154414;154415;154416;154417;154418;154419 154415 17 IEEGIEFVK Unmodified 1062.5597 0.55972651 3762 Q96BP3 PPWD1 Peptidylprolyl isomerase domain and WD repeat-containing protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 67.112 61.8 2 0.037057 75641 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 62.546 29.706 47675000 0 47675000 0 0 0 0 0 0 0 0 0 0 0 0 0 23052 3762 21056 193684;193685 154420 154420 1 IEEGQTLMICGK Unmodified 1377.6632 0.66322208 5263 Q9Y620 RAD54B DNA repair and recombination protein RAD54B yes yes 0 0 0 By MS/MS 2 0 1 1 61.247 55.372 2 0.014215 71196 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83 49.737 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23053 5263 21057 193686 154421 154421 1 IEEGTYGVVYR Unmodified 1284.635 0.63501672 1118;5069 P21127;Q9UQ88 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A no no 0 0 0 By MS/MS 10 0 1 1 50.553 51.248 2 0.033304 57030 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.089 22.015 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23054 1118;5069 21058 193687 154422 154422 1 IEEIEREIIK Unmodified 1270.7133 0.71326704 2201 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 53.384 53.499 3 0.0059226 60643 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 47.971 24.594 21033000 0 0 0 0 0 11627000 0 0 0 9405900 0 0 0 0 0 23055 2201 21059 193688;193689 154423;154424 154423 2 IEEIPLDQVDIDK Unmodified 1525.7876 0.78755419 3702 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.327 78.386 2 0.00047909 90546 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 79.286 64.314 132360000 0 0 0 5968900 6778300 11520000 8057800 8247400 6489200 14402000 10198000 14462000 8457900 14047000 23728000 23056 3702 21060 193690;193691;193692;193693;193694;193695;193696;193697;193698;193699;193700;193701 154425;154426;154427;154428;154429;154430;154431;154432;154433;154434 154425 10 IEELDQENEAALENGIK Unmodified 1913.9218 0.92181584 1473 P43243 MATR3 Matrin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.76 3 1 23 1 3 2 2 2 2 2 2 2 2 2 1 2 2 69.081 68.264 2;3 0 78615 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 291.57 232.5 1788300000 5707700 203640000 0 80844000 82050000 147650000 92203000 105110000 142880000 138070000 190380000 169030000 127560000 109720000 193480000 23057 1473 21061 193702;193703;193704;193705;193706;193707;193708;193709;193710;193711;193712;193713;193714;193715;193716;193717;193718;193719;193720;193721;193722;193723;193724;193725;193726;193727;193728 154435;154436;154437;154438;154439;154440;154441;154442;154443;154444;154445;154446;154447;154448;154449;154450;154451;154452 154435 16 IEELDQENEAALENGIKNEENTEPGAESSENADDPNK Unmodified 4041.7683 0.76829449 1473 P43243 MATR3 Matrin-3 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 72.031 72.129 3 3.6145E-22 83136 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 47.191 45.608 33768000 0 0 0 0 4008300 0 2116100 4683200 0 5681900 4322500 9872700 3083800 0 0 23058 1473 21062 193729;193730;193731;193732;193733;193734;193735 154453;154454;154455 154455 3 IEELDVEKVK Unmodified 1200.6602 0.66016884 1316 P32019 INPP5B Type II inositol 1,4,5-trisphosphate 5-phosphatase yes yes 0 0 1 By MS/MS 2 0 1 1 14.01 11.704 3 0.040228 14915 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 36.424 7.4667 5267000 0 0 5267000 0 0 0 0 0 0 0 0 0 0 0 0 23059 1316 21063 193736 154456 154456 1 IEELGSELK Unmodified 1016.539 0.53899107 2385 Q14181 POLA2 DNA polymerase alpha subunit B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.67 3.77 4 2 1 2 1 1 1 49.766 45.91 1;2 6.5449E-06 59356 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 159.37 72.415 491780000 17427000 439230000 3324200 0 0 0 0 11141000 0 20662000 0 0 0 0 0 23060 2385 21064 193737;193738;193739;193740;193741;193742 154457;154458;154459;154460;154461;154462 154458 5 IEELQEALRK Unmodified 1227.6823 0.68230126 3174 Q86VS8 HOOK3 Protein Hook homolog 3 yes yes 0 0 1 By matching By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 51.163 47.221 3 0.030368 59457 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 43.492 30.537 21049000 5045900 0 11817000 0 0 0 0 0 0 0 0 0 0 4186700 0 23061 3174 21065 193743;193744;193745 154463;154464 154463 2 IEELQLIVNDK Unmodified 1312.7238 0.72383172 1876 P62195 PSMC5 26S protease regulatory subunit 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.42 3.66 3 1 8 1 2 1 1 1 1 1 1 1 1 1 78.528 76.97 2 1.8597E-68 97495 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 222.28 161.45 924290000 42044000 575060000 18996000 10582000 29652000 33561000 13337000 0 14008000 64985000 54580000 67484000 0 0 0 23062 1876 21066 193746;193747;193748;193749;193750;193751;193752;193753;193754;193755;193756;193757 154465;154466;154467;154468;154469;154470;154471;154472;154473;154474;154475 154470 11 IEELQQRK Unmodified 1042.5771 0.57710791 2689 Q4V328 GRIPAP1 GRIP1-associated protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 14.951 12.128 2 0.017985 16070 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.93 24.672 39533000 0 13071000 26462000 0 0 0 0 0 0 0 0 0 0 0 0 23063 2689 21067 193758;193759 154476 154476 1 IEEMAEQER Oxidation (M) 1149.4972 0.49720261 3548 Q8WUM0 NUP133 Nuclear pore complex protein Nup133 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 10.552 10.691 2 0.0041664 7627 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 75.378 16.398 28398000 0 0 0 2726600 1892800 3202300 2834200 0 2383400 2741700 3281200 2322300 2996800 1913400 2103900 23064 3548 21068 193760;193761;193762;193763;193764;193765;193766;193767;193768;193769;193770 154477;154478;154479;154480;154481;154482;154483;154484;154485;154486;154487 154482 5042 11 IEEMAEQER Unmodified 1133.5023 0.50228799 3548 Q8WUM0 NUP133 Nuclear pore complex protein Nup133 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 20.76 20.909 2 0.0032531 21848 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 90.657 41.239 72227000 0 0 0 5055000 7155300 8573000 7729000 5670500 0 8491300 9505900 0 9195700 0 10851000 23065 3548 21068 193771;193772;193773;193774;193775;193776;193777;193778;193779;193780 154488;154489;154490;154491;154492;154493;154494 154493 2 IEEMLENAERER Oxidation (M) 1533.7093 0.70932065 1614 P49959 MRE11A Double-strand break repair protein MRE11A yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 30.468 30.666 3 0.00019622 33080 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 77.593 68.766 119580000 0 0 0 6954500 0 11286000 11145000 8331700 8472800 12667000 12469000 24565000 15052000 8635800 0 23066 1614 21069 193781;193782;193783;193784;193785;193786;193787;193788;193789;193790 154495;154496;154497;154498;154499;154500;154501;154502 154500 2595 8 IEEMLENAERER Unmodified 1517.7144 0.71440603 1614 P49959 MRE11A Double-strand break repair protein MRE11A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 44.653 44.876 3 1.5576E-05 50327 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 102.4 76.683 224590000 0 0 0 10862000 0 22534000 15116000 20163000 14586000 20569000 28631000 39866000 0 16465000 35799000 23067 1614 21069 193791;193792;193793;193794;193795;193796;193797;193798;193799;193800;193801;193802 154503;154504;154505;154506;154507;154508;154509;154510;154511;154512;154513;154514;154515;154516;154517 154510 15 IEEMLENAERERLGNSHQPEK Unmodified 2508.2027 0.20269893 1614 P49959 MRE11A Double-strand break repair protein MRE11A yes yes 0 0 2 By MS/MS 2 0 1 1 60.059 51.833 4 0.00061241 70374 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.089 40.901 19664000 19664000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23068 1614 21070 193803 154518 154518 1 IEENSLKEEESIEGEK Unmodified 1861.8793 0.87928233 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.91 2.75 3 19 1 1 1 1 2 2 1 1 2 2 2 2 2 2 42.528 41.95 2;3 7.6028E-42 46547 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 158.17 135.69 614110000 19027000 87882000 2291100 36005000 49134000 0 42829000 24609000 17436000 66363000 70838000 58218000 46681000 36431000 56370000 23069 2451 21071 193804;193805;193806;193807;193808;193809;193810;193811;193812;193813;193814;193815;193816;193817;193818;193819;193820;193821;193822;193823;193824;193825 154519;154520;154521;154522;154523;154524;154525;154526;154527;154528;154529;154530;154531;154532;154533;154534;154535;154536;154537;154538 154536 20 IEEPLFK Unmodified 874.48002 0.48001963 2504 Q15172 PPP2R5A Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 60.611 55.772 2 0.032088 71568 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.866 36.747 36963000 0 35205000 1758100 0 0 0 0 0 0 0 0 0 0 0 0 23070 2504 21072 193826;193827 154539 154539 1 IEEPPIPPLEQPVAPEDK Unmodified 1997.0357 0.035723389 4287 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 2 22 2 2 1 2 2 2 2 2 2 1 2 2 2 81.788 81.457 2;3 1.0041E-05 100124 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 59.585 48.541 225190000 0 62924000 0 7817000 4275400 19372000 11086000 8762400 9867200 18986000 18269000 9795700 10085000 14655000 29293000 23071 4287 21073 193828;193829;193830;193831;193832;193833;193834;193835;193836;193837;193838;193839;193840;193841;193842;193843;193844;193845;193846;193847;193848;193849;193850;193851 154540;154541;154542;154543;154544;154545;154546;154547;154548;154549;154550;154551 154544 11 IEEPSPIVYSLPAPELPEAFFGTPISK Unmodified 2927.5208 0.52082839 3601 Q8WYP5 AHCTF1 Protein ELYS yes yes 0 0 0 By MS/MS 2 0 1 1 101.07 96.359 3 3.8879E-29 119105 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.881 75.39 22725000 0 22725000 0 0 0 0 0 0 0 0 0 0 0 0 0 23072 3601 21074 193852 154552 154552 1 IEEPSVVETTHQDSPLPHPESTTSDEK Unmodified 2988.3836 0.38361922 1019 P15336 ATF2 Cyclic AMP-dependent transcription factor ATF-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9 2.45 1 6 1 1 1 1 1 1 1 59.912 59.349 4 0.0047833 67769 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 22.988 17.534 61859000 0 5829600 0 0 5074600 6590100 0 0 4783200 10231000 13103000 0 0 0 16247000 23073 1019 21075 193853;193854;193855;193856;193857;193858;193859 154553;154554 154553 2 IEEQEEQRK Unmodified 1187.5782 0.57823012 329 O43432 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 6.4979 3.1966 3 0.028407 4741 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 43.282 27.895 31101000 0 31101000 0 0 0 0 0 0 0 0 0 0 0 0 0 23074 329 21076 193860;193861 154555 154555 1 IEEQLTLEK Unmodified 1101.5918 0.59175492 1289 P30740 SERPINB1 Leukocyte elastase inhibitor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 6.17 3.85 2 1 3 1 2 1 1 1 50.385 47.457 2 0.0006347 60970 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.13 44.212 227860000 4325300 205790000 0 0 0 3197200 0 0 0 0 4584700 0 0 0 9956500 23075 1289 21077 193862;193863;193864;193865;193866;193867 154556;154557;154558 154556 3 IEERAEFLNK Unmodified 1247.651 0.65100113 2117 Q05682 CALD1 Caldesmon yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.33 0.471 2 1 1 1 1 44.03 38.857 2;3 0.01334 49245 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 107.21 68.243 56801000 27739000 14879000 14182000 0 0 0 0 0 0 0 0 0 0 0 0 23076 2117 21078 193868;193869;193870 154559;154560;154561 154561 3 IEEREGITVYSMQFGGYAK Unmodified 2177.0463 0.046304851 4610 Q9NRV9 HEBP1 Heme-binding protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 83.169 75.038 3 1.0905E-06 98179 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.779 58.773 7452100 7452100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23077 4610 21079 193871 154562 154562 1 IEESDQGPYAIILAPTR Unmodified 1871.9629 0.9628928 4168 Q9BUQ8 DDX23 Probable ATP-dependent RNA helicase DDX23 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 83.113 83.213 2 0.0015662 96175 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 63.76 46.393 3558300 0 0 0 0 0 1373100 2185200 0 0 0 0 0 0 0 0 23078 4168 21080 193872;193873;193874 154563;154564 154563 2 IEESIDR Unmodified 860.42396 0.42396131 2415 Q14566 MCM6 DNA replication licensing factor MCM6 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 19.964 20.174 2 0.044016 19561 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.993 11.489 56414000 0 0 0 3307800 3400200 6554800 0 0 2844900 0 9026700 12175000 0 0 19105000 23079 2415 21081 193875;193876;193877;193878;193879;193880;193881 154565 154565 1 IEETALK Unmodified 802.44363 0.44363412 2518 Q15345 LRRC41 Leucine-rich repeat-containing protein 41 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 21.712 21.928 2 0.030787 21600 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 74.415 16.952 83946000 0 0 0 6321100 4947700 8153700 6383500 0 0 8527700 10422000 9430000 11425000 7383700 10952000 23080 2518 21082 193882;193883;193884;193885;193886;193887;193888;193889;193890;193891 154566;154567;154568;154569;154570 154569 5 IEETNPSLAQDTVIIK Unmodified 1769.9411 0.94109472 4770 Q9NZJ4 SACS Sacsin yes yes 0 0 0 By MS/MS 2 0 1 1 77.102 72.264 2 0.00015832 90308 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.29 94.403 21057000 0 21057000 0 0 0 0 0 0 0 0 0 0 0 0 0 23081 4770 21083 193892 154571 154571 1 IEEVHLPVEK Unmodified 1191.6499 0.6499385 423 O60678 PRMT3 Protein arginine N-methyltransferase 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.8 4 1 8 1 3 1 1 1 1 1 1 1 1 1 55.665 53.611 2;3 0.0015285 67551 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 98.048 75.519 749000000 16544000 564150000 39673000 7351500 0 0 0 7827800 0 19001000 21852000 17033000 13053000 12923000 29586000 23082 423 21084 193893;193894;193895;193896;193897;193898;193899;193900;193901;193902;193903;193904;193905 154572;154573;154574;154575;154576;154577;154578;154579;154580;154581;154582;154583 154577 8 IEEVLLSQSYVK Unmodified 1406.7657 0.76569654 17 A3KN83 SBNO1 Protein strawberry notch homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.36 3.15 2 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 74.766 74.049 2 8.375E-13 92286 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 155.11 123.24 152970000 0 103910000 1707400 0 0 4025300 2822400 4015700 2778500 4358700 5480900 7650300 3625000 3600800 8996900 23083 17 21085 193906;193907;193908;193909;193910;193911;193912;193913;193914;193915;193916;193917;193918;193919 154584;154585;154586;154587;154588;154589;154590;154591;154592;154593;154594;154595;154596 154587 13 IEEVLMTAQAVEEDK Unmodified 1703.8288 0.82876708 4778 Q9NZN5 ARHGEF12 Rho guanine nucleotide exchange factor 12 yes yes 0 0 0 By MS/MS 2 0 1 1 79.162 74.426 2 2.1204E-30 92750 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.21 87.624 40581000 0 40581000 0 0 0 0 0 0 0 0 0 0 0 0 0 23084 4778 21086 193920 154597 154597 1 IEEVLSPEGSPSK Unmodified 1370.6929 0.69292553 4874 Q9UEY8 ADD3 Gamma-adducin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 45.892 45.485 2 8.0898E-05 51273 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 103.34 81.256 99482000 0 26188000 0 5653700 5098200 0 5874600 6890800 5091700 6689600 9372000 0 9004100 5899600 13719000 23085 4874 21087 193921;193922;193923;193924;193925;193926;193927;193928;193929;193930;193931;193932;193933 154598;154599;154600;154601;154602;154603;154604;154605;154606;154607;154608;154609;154610 154607 13 IEEVPELPLVVEDK Unmodified 1607.8658 0.86580451 1377 P36578 RPL4 60S ribosomal protein L4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 86.479 86.568 2 0.0011782 100794 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.49 48.276 134510000 0 0 0 0 12932000 14589000 10278000 11187000 0 2281800 0 34191000 22590000 23205000 3258600 23086 1377 21088 193934;193935;193936;193937;193938;193939;193940;193941;193942 154611;154612;154613;154614;154615;154616;154617;154618;154619 154618 6 IEEVSAR Unmodified 802.41848 0.418482 1081 P18858 LIG1 DNA ligase 1 yes yes 0 0 0 By MS/MS 10 0 1 1 14.239 14.407 2 0.039143 13574 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 69.176 2.1825 9574600 0 0 0 0 0 0 0 0 9574600 0 0 0 0 0 0 23087 1081 21089 193943 154620 154620 1 IEEVSDTSSLQPQASLK Unmodified 1830.9211 0.92108756 4425 Q9H6T3 RPAP3 RNA polymerase II-associated protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 60.348 59.172 2 1.4107E-143 67235 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 205.72 175.51 233480000 5312200 56073000 0 8372800 9052600 11482000 12478000 7808000 9442300 16190000 23618000 18062000 16316000 11623000 27652000 23088 4425 21090 193944;193945;193946;193947;193948;193949;193950;193951;193952;193953;193954;193955;193956;193957;193958 154621;154622;154623;154624;154625;154626;154627;154628;154629;154630;154631;154632;154633;154634;154635;154636;154637 154625 17 IEEYISK Unmodified 880.4542 0.45419881 3579 Q8WWY3 PRPF31 U4/U6 small nuclear ribonucleoprotein Prp31 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 28.169 28.465 2 0.034305 29621 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.342 28.868 172680000 0 0 0 0 0 30610000 0 37416000 0 0 0 0 0 41835000 62816000 23089 3579 21091 193959;193960;193961;193962 154638 154638 1 IEFAVAEGAK Unmodified 1033.5444 0.5444108 2604 Q16513 PKN2 Serine/threonine-protein kinase N2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 53.708 53.917 2 0.0015191 60917 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 92.838 3.6956 146960000 0 0 0 7501000 0 15602000 0 12336000 8808200 16826000 20190000 15344000 15794000 11763000 22801000 23090 2604 21092 193963;193964;193965;193966;193967;193968;193969;193970;193971;193972 154639;154640;154641;154642;154643;154644;154645;154646;154647;154648;154649;154650;154651;154652;154653 154640 14 IEFEGQPVDFVDPNK Unmodified 1732.8308 0.83081599 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 82.111 80.919 2 3.1668E-38 99419 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.42 108.66 1202500000 24640000 990820000 5973900 4965200 7622400 0 9234500 12551000 11057000 16664000 23183000 21858000 10449000 16141000 47300000 23091 1300 21093 193973;193974;193975;193976;193977;193978;193979;193980;193981;193982;193983;193984;193985;193986;193987;193988 154654;154655;154656;154657;154658;154659;154660;154661;154662;154663;154664;154665;154666;154667;154668;154669;154670;154671 154657 18 IEFEHGTTSGK Unmodified 1204.5724 0.57241646 4677 Q9NVQ4 FAIM Fas apoptotic inhibitory molecule 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 1 3 2 26.268 22.252 2;3 3.7081E-09 28013 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 134.84 94.576 473790000 40262000 194830000 238700000 0 0 0 0 0 0 0 0 0 0 0 0 23092 4677 21094 193989;193990;193991;193992;193993;193994 154672;154673;154674;154675;154676;154677;154678 154677 6 IEFEQFLPMMQAISNNK Unmodified 2038.9856 0.98561885 815 P05976 MYL1 Myosin light chain 1/3, skeletal muscle isoform yes yes 0 0 0 By MS/MS 3 0 1 1 75.141 71.585 3 0.024273 86047 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 20.368 10.268 5548100 0 5548100 0 0 0 0 0 0 0 0 0 0 0 0 0 23093 815 21095 193995 154679 154679 1 IEFGVDVTTK Unmodified 1107.5812 0.58119023 1135 P22234 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS 4.79 3.61 13 6 9 6 11 2 1 1 1 1 1 1 1 1 1 72.209 68.873 2 0.002199 84235 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.15 42.116 2523000000 122860000 2371200000 680340 0 0 2997800 3180600 1916400 0 3425500 3786500 2820200 3852000 3271100 3088900 23094 1135 21096 193996;193997;193998;193999;194000;194001;194002;194003;194004;194005;194006;194007;194008;194009;194010;194011;194012;194013;194014;194015;194016;194017;194018;194019;194020;194021;194022;194023 154680;154681;154682;154683;154684;154685;154686;154687;154688;154689;154690;154691;154692;154693;154694;154695;154696;154697;154698;154699;154700;154701;154702;154703;154704;154705;154706;154707 154680 27 IEFISTMEGYK Unmodified 1316.6322 0.63223953 3667 Q92820 GGH Gamma-glutamyl hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 77.668 77.328 2 0.00050177 88901 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.048 79.675 39360000 0 0 1822800 3576200 0 3040700 0 8084500 0 8105100 0 0 0 4215400 10515000 23095 3667 21097 194024;194025;194026;194027;194028;194029;194030 154708;154709;154710;154711;154712;154713;154714 154710 7 IEFISTMEGYK Oxidation (M) 1332.6272 0.62715415 3667 Q92820 GGH Gamma-glutamyl hydrolase yes yes 0 1 0 By MS/MS 2 0 1 1 68.915 63.015 2 0.024898 80312 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 53.597 30.857 40103000 0 40103000 0 0 0 0 0 0 0 0 0 0 0 0 0 23096 3667 21097 194031 154715 154715 1 IEFLQSHENQEIYQK Unmodified 1904.9268 0.92684164 424;1683 P52294;O60684;O15131 KPNA1;KPNA6;KPNA5 Importin subunit alpha-5;Importin subunit alpha-5, N-terminally processed;Importin subunit alpha-7;Importin subunit alpha-6 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.66 2.95 4 1 24 1 2 2 2 2 2 2 2 2 2 2 2 2 2 2 61.491 60.667 2;3 5.7384E-29 68104 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 143.93 133.46 1618500000 3603000 230370000 171370000 45292000 37589000 116940000 56816000 69547000 72866000 110660000 132370000 152750000 101370000 104010000 212950000 23097 1683;424 21098 194032;194033;194034;194035;194036;194037;194038;194039;194040;194041;194042;194043;194044;194045;194046;194047;194048;194049;194050;194051;194052;194053;194054;194055;194056;194057;194058;194059;194060 154716;154717;154718;154719;154720;154721;154722;154723;154724;154725;154726;154727;154728;154729;154730;154731;154732;154733;154734;154735;154736;154737 154721 22 IEFPILEDSSELQLK Unmodified 1759.9244 0.92438203 2995 Q6YHK3 CD109 CD109 antigen yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 96.81 92.785 2 0.00029796 114753 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.24 93.899 57994000 0 57994000 0 0 0 0 0 0 0 0 0 0 0 0 0 23098 2995 21099 194061;194062 154738;154739;154740 154738 3 IEFPLPDEK Unmodified 1086.5597 0.55972651 1875 P62191 PSMC1 26S protease regulatory subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 75.834 74.766 2 0.00036053 93261 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.41 80.46 2159900000 54868000 1681200000 16879000 22178000 26769000 52303000 11245000 10093000 13205000 65871000 62870000 67721000 13969000 17989000 42650000 23099 1875 21100 194063;194064;194065;194066;194067;194068;194069;194070;194071;194072;194073;194074;194075;194076;194077;194078;194079 154741;154742;154743;154744;154745;154746;154747;154748;154749;154750;154751;154752;154753;154754;154755;154756 154744 15 IEFPLPDRR Unmodified 1141.6244 0.62439245 1482 P43686 PSMC4 26S protease regulatory subunit 6B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.754 64.841 3 0.0012528 74522 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 99.802 53.644 266110000 0 0 0 15514000 11372000 38552000 7049100 6992500 9302500 34476000 40210000 56519000 7592900 10102000 28428000 23100 1482 21101 194080;194081;194082;194083;194084;194085;194086;194087;194088;194089;194090;194091 154757;154758;154759;154760;154761;154762;154763;154764;154765;154766;154767;154768;154769;154770;154771;154772 154760 15 IEFPMPNEEAR Unmodified 1331.618 0.61798644 1066 P17980 PSMC3 26S protease regulatory subunit 6A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 71.914 72.043 2 0.010538 82861 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 88.056 69.276 97608000 0 0 0 0 10658000 0 0 0 0 18947000 20856000 29072000 0 0 18074000 23101 1066 21102 194092;194093;194094;194095;194096 154773;154774;154775;154776;154777 154775 2 IEFPMPNEEAR Oxidation (M) 1347.6129 0.61290107 1066 P17980 PSMC3 26S protease regulatory subunit 6A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 2 2 1 2 2 1 58.723 58.884 2 0.0089116 66672 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 46.462 27.191 109720000 0 0 0 0 15954000 18246000 0 0 0 11646000 30045000 25998000 0 0 7830300 23102 1066 21102 194097;194098;194099;194100;194101;194102;194103;194104;194105;194106 154778;154779 154779 1503 2 IEFPPPNEEAR Unmodified 1297.6303 0.63026569 1876 P62195 PSMC5 26S protease regulatory subunit 8 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 54.949 54.771 2 0.032637 62591 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 35.511 19.849 6625600 0 0 0 0 5368700 0 0 1256900 0 0 0 0 0 0 0 23103 1876 21103 194107;194108;194109 154780;154781 154781 2 IEFPPPNEEARLDILK Unmodified 1880.0044 0.0043636815 1876 P62195 PSMC5 26S protease regulatory subunit 8 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 87.356 82.221 3 0.0026955 104719 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.885 45.031 105650000 19900000 78807000 6943600 0 0 0 0 0 0 0 0 0 0 0 0 23104 1876 21104 194110;194111;194112 154782;154783;154784 154783 3 IEFSLPDLEGR Unmodified 1274.6507 0.65066678 1369 P35998 PSMC2 26S protease regulatory subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 86.284 86.352 2 1.3262E-05 100079 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 136.63 85.569 204910000 0 0 0 2769000 10325000 22308000 4403300 7358400 8655000 41602000 27159000 36307000 5112100 8126800 30789000 23105 1369 21105 194113;194114;194115;194116;194117;194118;194119;194120;194121;194122;194123;194124 154785;154786;154787;154788;154789;154790;154791;154792;154793;154794;154795;154796;154797;154798 154786 14 IEFVTGTK Unmodified 893.48583 0.48583328 4907 Q9UHR5 SAP30BP SAP30-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.889 44.062 2 0.013807 49248 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 71.501 10.713 398720000 0 0 0 26916000 17471000 24896000 28123000 23477000 24156000 32169000 45977000 59885000 33999000 26951000 54701000 23106 4907 21106 194125;194126;194127;194128;194129;194130;194131;194132;194133;194134;194135;194136 154799;154800;154801;154802;154803;154804;154805;154806;154807 154801 9 IEGAIDIREIK Unmodified 1255.7136 0.71360139 1083 P19174 PLCG1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 66.898 60.873 3 1.5341E-05 75596 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 100.55 32.828 32836000 7591000 0 25245000 0 0 0 0 0 0 0 0 0 0 0 0 23107 1083 21107 194137;194138 154808;154809 154809 2 IEGCHICTSVTPGEPQVFLGK Unmodified 2328.1242 0.1242376 3101 Q7Z4S6 KIF21A Kinesin-like protein KIF21A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 79.702 74.992 3 4.4461E-35 94351 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.453 81.853 79399000 16932000 15142000 47325000 0 0 0 0 0 0 0 0 0 0 0 0 23108 3101 21108 194139;194140;194141;194142 154810;154811;154812;154813 154810 4 IEGDETSTEAATR Unmodified 1378.6212 0.62121715 1686 P52434 POLR2H DNA-directed RNA polymerases I, II, and III subunit RPABC3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 17.174 17.567 2 0.00012394 17390 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 98.353 84.147 30028000 0 0 0 0 0 0 0 0 0 2437800 3482200 10001000 4909100 3788200 5410000 23109 1686 21109 194143;194144;194145;194146;194147;194148 154814;154815;154816;154817;154818;154819 154819 5 IEGDPQGVQQAK Unmodified 1268.6361 0.63607935 2033 Q00341 HDLBP Vigilin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.821 21.027 2 2.407E-05 20695 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 117.01 97.743 559150000 0 0 0 30121000 21372000 46345000 31369000 32805000 21775000 77843000 64263000 58278000 51861000 47291000 75829000 23110 2033 21110 194149;194150;194151;194152;194153;194154;194155;194156;194157;194158;194159;194160 154820;154821;154822;154823;154824;154825;154826;154827;154828;154829;154830;154831 154823 12 IEGDPQGVQQAKR Unmodified 1424.7372 0.73719038 2033 Q00341 HDLBP Vigilin yes yes 0 0 1 By MS/MS By matching By MS/MS 10 0 3 1 1 1 17.136 17.449 3 0.025259 17115 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 20.427 9.5014 5901600 0 0 0 1565100 0 0 0 0 0 0 1018100 3318400 0 0 0 23111 2033 21111 194161;194162;194163 154832 154832 1 IEGEGSVLQAK Unmodified 1129.5979 0.59790293 2444 Q14764 MVP Major vault protein yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 67.635 67.876 2 0.011696 78175 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 48.283 7.254 105480000 0 0 0 0 0 77319000 0 0 0 0 0 0 0 0 28162000 23112 2444 21112 194164;194165 154833;154834 154833 2 IEGEMQVPDVDIR Oxidation (M) 1515.7239 0.72390808 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 60.998 60.993 2 0.00043356 69930 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 74.162 57.938 27764000 0 0 0 2353300 2172300 2539000 2714800 2917000 0 0 0 6051800 5243900 3772500 0 23113 2172 21113 194166;194167;194168;194169;194170;194171;194172;194173 154835;154836;154837;154838;154839;154840 154840 3509 5 IEGEMQVPDVDIRGPK Oxidation (M) 1797.8931 0.89309867 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 57.881 57.363 3 2.8011E-15 65611 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 100.41 81.814 237020000 0 37105000 0 0 17826000 18148000 23438000 20409000 0 0 22023000 0 31582000 28211000 38273000 23114 2172 21114 194174;194175;194176;194177;194178;194179;194180;194181;194182 154841;154842;154843;154844;154845;154846;154847;154848;154849;154850;154851 154851 3509 11 IEGEMQVPDVDIRGPK Unmodified 1781.8982 0.89818405 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.86 3.4 1 1 5 2 1 1 1 1 1 71.634 70.462 3 0.0071279 80175 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 22.833 15.602 137030000 0 76252000 0 0 2982500 9801400 5862400 13269000 0 0 0 0 0 0 28858000 23115 2172 21114 194183;194184;194185;194186;194187;194188;194189 154852;154853 154852 2 IEGFEVLK Unmodified 933.51713 0.51713341 2535 Q15435 PPP1R7 Protein phosphatase 1 regulatory subunit 7 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 75.189 69.471 2 0.027071 89919 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.77 21.211 201480000 12194000 189290000 0 0 0 0 0 0 0 0 0 0 0 0 0 23116 2535 21115 194190;194191;194192 154854;154855 154855 2 IEGFTNVRELYAK Unmodified 1538.8093 0.80929269 3527 Q8TF64 GIPC3 PDZ domain-containing protein GIPC3 yes yes 0 0 1 By MS/MS 2 0 1 1 77.432 69.301 3 0.041702 91269 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 28.779 14.766 11308000 11308000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23117 3527 21116 194193 154856 154856 1 IEGLLAAFPK Unmodified 1057.6172 0.61718181 1538 P48444 ARCN1 Coatomer subunit delta yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 83.183 83.177 2 0.0090337 96312 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 58.596 26.531 19555000 0 0 0 2055000 1883000 3714000 1868200 0 3030300 3426500 0 0 0 3577900 0 23118 1538 21117 194194;194195;194196;194197;194198;194199;194200 154857;154858 154858 2 IEGLQNLVNLR Unmodified 1267.7248 0.72483478 2535 Q15435 PPP1R7 Protein phosphatase 1 regulatory subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 82.888 83.014 2 0.00031558 96120 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 101.64 80.773 31715000 0 0 0 0 0 4681800 0 2859500 0 4941500 0 0 0 5581700 13651000 23119 2535 21118 194201;194202;194203;194204;194205;194206 154859;154860;154861;154862;154863;154864 154859 6 IEGTLGVLYDQPR Unmodified 1459.7671 0.76709352 3709 Q93074 MED12 Mediator of RNA polymerase II transcription subunit 12 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 73.99 74.116 2 0.00084891 85562 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 83.397 63.093 27550000 0 0 0 0 2235100 0 2239300 0 2671300 3299100 5058300 4216000 0 3326900 4504400 23120 3709 21119 194207;194208;194209;194210;194211;194212;194213;194214;194215 154865;154866;154867;154868;154869 154865 5 IEGVYARDETEFYLGK Unmodified 1888.9207 0.92069363 1070 P18077 RPL35A 60S ribosomal protein L35a yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 77.651 71.636 3 0.010897 92771 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.493 22.865 43823000 43823000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23121 1070 21120 194216;194217 154870;154871 154871 2 IEGYEDQVLITEHGDLGNGK Unmodified 2186.0491 0.049141622 1524 P47755 CAPZA2 F-actin-capping protein subunit alpha-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.42 3.66 3 1 8 1 2 1 1 1 1 1 1 1 1 1 70.769 69.237 3 1.4091E-05 83907 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 64.346 55.746 130320000 18243000 63582000 4263500 0 0 4077000 0 3039200 10063000 4758000 4722800 5335900 2942600 0 9287900 23122 1524 21121 194218;194219;194220;194221;194222;194223;194224;194225;194226;194227;194228;194229 154872;154873;154874;154875;154876;154877;154878;154879 154875 7 IEGYEDQVLITEHGDLGNSR Unmodified 2244.0659 0.065854319 1705 P52907 CAPZA1 F-actin-capping protein subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.13 1 1 7 1 1 1 1 1 1 1 1 1 70.568 70.177 3 5.0706E-35 89889 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.37 90.813 66856000 0 2950300 0 0 0 0 0 6603500 0 10775000 0 15514000 0 6790900 24222000 23123 1705 21122 194230;194231;194232;194233;194234;194235;194236;194237;194238 154880;154881;154882;154883;154884;154885;154886;154887;154888;154889 154883 10 IEGYEDQVLITEHGDLGNSRFLDPRNK Unmodified 3114.537 0.53704059 1705 P52907 CAPZA1 F-actin-capping protein subunit alpha-1 yes yes 0 0 2 By MS/MS 2 0 1 1 83.318 75.188 4 5.966E-06 98313 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.428 28.662 20881000 20881000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23124 1705 21123 194239 154890 154890 1 IEHTYTGGVDSDLGEAMSDCDPDGPLMCHTTK Unmodified 3508.4527 0.45271989 2481 Q15029 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 79.289 74.111 4 9.4161E-21 94757 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.261 73.27 51370000 14447000 32062000 4861000 0 0 0 0 0 0 0 0 0 0 0 0 23125 2481 21124 194240;194241;194242 154891;154892;154893 154892 3 IEHVEQNTEEFLR Unmodified 1642.7951 0.79509919 4969 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 52.408 52.624 3 0.023137 58761 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 23.881 13.247 14514000 0 0 0 0 0 0 0 0 0 5123100 0 0 4926600 4464500 0 23126 4969 21125 194243;194244;194245 154894 154894 1 IEIAEVVSLPR Unmodified 1224.7078 0.70778773 5402 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 2 1 2 1 1 83.173 83.086 2 0.026909 96133 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 40.067 24.405 + 46556000 0 0 0 22657000 7321300 10840000 3062000 2675900 0 0 0 0 0 0 0 23127 5402 21126 194246;194247;194248;194249;194250;194251;194252 154895;154896 154895 2 IEIDNGDELTADFLYEEVHPK Unmodified 2446.154 0.15400062 2190 Q12792 TWF1 Twinfilin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 2 3 1 94.011 89.504 3 2.0679E-18 111748 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.82 101.48 376500000 285590000 86596000 4315000 0 0 0 0 0 0 0 0 0 0 0 0 23128 2190 21127 194253;194254;194255;194256;194257;194258 154897;154898;154899;154900;154901;154902;154903;154904;154905 154898 9 IEIDPQFQVVR Unmodified 1342.7245 0.72450043 100 CON__Q7RTT2;CON__Q8N1N4-2;Q8N1N4 KRT78 Keratin, type II cytoskeletal 78 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.311 78.371 2 1.7109E-06 90586 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 143.86 106.67 + 1110200000 0 0 0 176350000 52250000 86545000 50397000 217940000 48725000 107240000 85916000 110960000 72887000 51382000 49612000 23129 100 21128 194259;194260;194261;194262;194263;194264;194265;194266;194267;194268;194269;194270 154906;154907;154908;154909;154910;154911;154912;154913;154914;154915;154916;154917;154918;154919;154920 154908 15 IEIESFYEGEDFSETLTRAK Unmodified 2363.1169 0.11688684 932 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 1 By MS/MS 2 0 1 1 90.372 82.242 3 2.4876E-09 106771 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.546 72.674 13343000 13343000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23130 932 21129 194271 154921;154922 154921 2 IEIGDGAELTAEFLYDEVHPK Unmodified 2345.1427 0.14270766 2884 Q6IBS0 TWF2 Twinfilin-2 yes yes 0 0 0 By MS/MS By MS/MS 2.67 0.471 1 2 2 1 97.777 92.793 3 4.1729E-39 116509 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.488 89.591 36320000 34080000 2239300 0 0 0 0 0 0 0 0 0 0 0 0 0 23131 2884 21130 194272;194273;194274 154923;154924 154924 2 IEIGPEPTLFGK Unmodified 1299.7075 0.70745338 5102 Q9Y2H2 INPP5F Phosphatidylinositide phosphatase SAC2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 85.103 81.495 2 0.0068255 101354 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.763 52.365 29226000 0 27392000 1834400 0 0 0 0 0 0 0 0 0 0 0 0 23132 5102 21131 194275;194276;194277;194278;194279;194280;194281 154925;154926;154927;154928;154929;154930 154925 6 IEIGPEPTLFGKPK Unmodified 1524.8552 0.85518025 5102 Q9Y2H2 INPP5F Phosphatidylinositide phosphatase SAC2 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 75.504 75.569 3 0.0018123 87103 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 50.222 43.51 56564000 0 0 0 2742200 2935300 0 3535300 6585700 2985800 4809300 6347200 5936700 4985600 4017700 11683000 23133 5102 21132 194282;194283;194284;194285;194286;194287;194288;194289;194290;194291;194292 154931;154932;154933;154934 154931 4 IEIHYAK Unmodified 872.4756 0.47560295 2467 Q15003 NCAPH Condensin complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 33.641 28.85 2 0.025533 36510 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 100.07 0.55577 191940000 131930000 0 60004000 0 0 0 0 0 0 0 0 0 0 0 0 23134 2467 21133 194293;194294 154935 154935 1 IEILAPPNGSVPGDR Unmodified 1533.8151 0.81510635 2205 Q12904 AIMP1 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1;Endothelial monocyte-activating polypeptide 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.846 72.909 2 0.00038725 83840 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 89.9 73.702 173970000 0 0 0 8635000 10293000 15484000 9603600 10218000 6548800 16745000 20321000 25429000 12539000 13638000 24517000 23135 2205 21134 194295;194296;194297;194298;194299;194300;194301;194302;194303;194304;194305;194306 154936;154937;154938;154939;154940;154941;154942;154943;154944 154943 9 IEILAPPNGSVPGDRITFDAFPGEPDK Unmodified 2851.4392 0.43922403 2205 Q12904 AIMP1 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1;Endothelial monocyte-activating polypeptide 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 93.069 87.761 3 6.5314E-08 108106 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 62.237 50.041 33575000 28219000 0 5355900 0 0 0 0 0 0 0 0 0 0 0 0 23136 2205 21135 194307;194308 154945;154946;154947 154947 3 IEILTPEVNK Unmodified 1154.6547 0.65468953 4041 Q99633 PRPF18 Pre-mRNA-splicing factor 18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65.69 65.084 2 1.0154E-05 82686 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.4 92.716 131400000 0 78320000 1715600 3693300 2896700 3777700 3074600 3092400 2937500 4507300 5978000 6196500 4505700 3418400 7284800 23137 4041 21136 194309;194310;194311;194312;194313;194314;194315;194316;194317;194318;194319;194320;194321;194322 154948;154949;154950;154951;154952;154953;154954;154955;154956 154951 9 IEINFPAEYPFKPPK Unmodified 1788.9451 0.94505789 1959 P68036 UBE2L3 Ubiquitin-conjugating enzyme E2 L3 yes yes 0 0 1 By MS/MS 10 0 1 1 84.931 85.11 3 0.0075682 98199 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.092 29.116 17179000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17179000 23138 1959 21137 194323 154957 154957 1 IEIPDLELADDLK Unmodified 1482.7817 0.78174053 3603 Q8WZ42 TTN Titin yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 61.162 56.323 2 0.025501 72587 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 48.64 10.918 36497000 0 27288000 9209200 0 0 0 0 0 0 0 0 0 0 0 0 23139 3603 21138 194324;194325 154958 154958 1 IEIPVTPTGQSVPSSPSIPGTPTLK Unmodified 2502.3581 0.35812016 4405 Q9H4Z3 PCIF1 Phosphorylated CTD-interacting factor 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 7 3.69 1 1 3 2 1 1 1 86.976 85.46 3 0.00016362 99630 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 33.425 30.917 45748000 0 26784000 0 0 0 0 0 0 0 0 4651100 5948400 0 0 8363800 23140 4405 21139 194326;194327;194328;194329;194330 154959;154960;154961;154962;154963 154963 4 IEIQEVNEGK Unmodified 1157.5928 0.59281755 2137 Q07617 SPAG1 Sperm-associated antigen 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.787 38.968 2 0.007587 43292 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 62.104 31.368 63912000 0 0 0 2814300 3108500 4223100 4434200 4623400 3405600 5535300 8889500 6197700 6093100 3548900 11039000 23141 2137 21140 194331;194332;194333;194334;194335;194336;194337;194338;194339;194340;194341;194342 154964 154964 1 IEISELNR Unmodified 972.52401 0.52400971 79;780 P04264;CON__P04264;CON__P35908v2;P35908;CON__P35908 KRT1;KRT2 Keratin, type II cytoskeletal 1;Keratin, type II cytoskeletal 2 epidermal no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.48 1.98 3 43 1 1 1 3 6 3 4 6 4 3 4 5 3 1 1 51.191 51.287 2 4.08E-49 56118 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 197.65 46.137 + 109370000000 3058200 2065500 1226400 14846000000 5617900000 8571500000 6095400000 16819000000 5395000000 9825200000 8436500000 13508000000 9473000000 6820000000 3955000000 23142 780;79 21141 194343;194344;194345;194346;194347;194348;194349;194350;194351;194352;194353;194354;194355;194356;194357;194358;194359;194360;194361;194362;194363;194364;194365;194366;194367;194368;194369;194370;194371;194372;194373;194374;194375;194376;194377;194378;194379;194380;194381;194382;194383;194384;194385;194386;194387;194388 154965;154966;154967;154968;154969;154970;154971;154972;154973;154974;154975;154976;154977;154978;154979;154980;154981;154982;154983;154984;154985;154986;154987;154988;154989;154990;154991;154992;154993;154994;154995;154996;154997;154998;154999;155000;155001;155002;155003;155004;155005;155006;155007;155008;155009;155010;155011;155012;155013;155014;155015;155016;155017;155018;155019;155020;155021;155022;155023;155024;155025;155026;155027;155028;155029;155030;155031;155032;155033;155034;155035;155036;155037;155038;155039;155040;155041;155042;155043;155044;155045;155046;155047;155048;155049;155050;155051;155052 154967 87 IEISELNRVIQR Unmodified 1468.8362 0.83617614 79;780 P04264;CON__P04264;CON__P35908v2;P35908;CON__P35908 KRT1;KRT2 Keratin, type II cytoskeletal 1;Keratin, type II cytoskeletal 2 epidermal no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 25 2 2 3 2 2 2 2 2 2 2 2 2 74.437 74.497 2;3 6.4663E-20 85828 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 137.17 91.252 + 2886400000 0 0 0 170080000 63008000 230570000 76750000 662790000 263580000 276690000 130820000 572550000 185940000 149210000 104360000 23143 780;79 21142 194389;194390;194391;194392;194393;194394;194395;194396;194397;194398;194399;194400;194401;194402;194403;194404;194405;194406;194407;194408;194409;194410;194411;194412;194413 155053;155054;155055;155056;155057;155058;155059;155060;155061;155062;155063;155064;155065;155066;155067;155068;155069;155070;155071;155072;155073;155074;155075;155076;155077;155078;155079;155080;155081 155055 29 IEISQHAK Unmodified 924.50288 0.50288033 1850 P61513 RPL37A 60S ribosomal protein L37a yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 15.892 13.034 2 0.038507 16635 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 71.296 13.484 52792000 0 13466000 39326000 0 0 0 0 0 0 0 0 0 0 0 0 23144 1850 21143 194414;194415 155082;155083;155084 155083 3 IEISSPCCPR Unmodified 1217.5533 0.5532777 2781 Q5T749 KPRP Keratinocyte proline-rich protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 43.073 43.001 2 0.0016572 48549 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 105.78 86.514 97206000 0 0 0 69163000 5053500 0 8555400 0 0 0 0 0 13107000 1327000 0 23145 2781 21144 194416;194417;194418;194419;194420;194421 155085;155086;155087;155088;155089 155088 5 IELDSSSPASK Unmodified 1132.5612 0.56118307 4202 Q9BW66 CINP Cyclin-dependent kinase 2-interacting protein yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 30.33 30.719 2 0.013514 32192 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.475 22.685 9752600 0 0 0 0 0 2211000 0 0 0 0 2144200 0 0 0 5397400 23146 4202 21145 194422;194423;194424 155090 155090 1 IELETYK Unmodified 894.46985 0.46984887 2598 Q16204 CCDC6 Coiled-coil domain-containing protein 6 yes yes 0 0 0 By MS/MS 2 0 1 1 45.931 40.483 2 0.027727 53217 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.068 30.033 330790000 0 330790000 0 0 0 0 0 0 0 0 0 0 0 0 0 23147 2598 21146 194425 155091;155092;155093 155092 3 IELFADVVPK Unmodified 1129.6383 0.63831118 331 O43447 PPIH Peptidyl-prolyl cis-trans isomerase H yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 84.216 83.692 2 0.0052901 104761 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.033 61.332 500040000 0 288530000 0 3646300 7945400 10506000 14917000 14318000 17706000 25107000 23818000 21867000 14639000 21791000 35254000 23148 331 21147 194426;194427;194428;194429;194430;194431;194432;194433;194434;194435;194436;194437;194438;194439 155094;155095;155096;155097;155098;155099;155100;155101;155102;155103;155104 155096 10 IELFVGGELIDPADDRK Unmodified 1885.9785 0.97854286 3701 Q93008 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 0 0 1 By MS/MS 2.33 0.471 2 1 3 91.071 84.466 2;3 2.2732E-07 108424 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.579 88.446 155100000 155100000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23149 3701 21148 194440;194441;194442 155105;155106;155107;155108 155107 4 IELGDVTPHNIK Unmodified 1334.7194 0.71941505 4310 Q9GZZ1 NAA50 N-alpha-acetyltransferase 50 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 2 1 2 2 57.919 58.032 2;3 1.0173E-29 65607 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 182.46 102.3 24591000000 0 0 0 1372600000 2914300000 2542200000 2169700000 1894200000 1833000000 2744500000 3775300000 5260500000 23878000 22142000 38333000 23150 4310 21149 194443;194444;194445;194446;194447;194448;194449;194450;194451;194452;194453;194454;194455;194456;194457;194458;194459;194460;194461;194462;194463;194464;194465 155109;155110;155111;155112;155113;155114;155115;155116;155117;155118;155119;155120;155121;155122;155123;155124;155125;155126;155127;155128;155129;155130;155131;155132;155133;155134;155135;155136;155137;155138;155139;155140;155141;155142;155143;155144;155145;155146;155147;155148;155149;155150;155151;155152;155153;155154;155155;155156 155147 40 IELIPSMLETGK Unmodified 1329.7214 0.72138888 2859 Q68DQ2 CRYBG3 Very large A-kinase anchor protein yes yes 0 0 0 By MS/MS 2 0 1 1 90.977 86.08 2 0.01645 106979 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.153 21.157 19223000 0 19223000 0 0 0 0 0 0 0 0 0 0 0 0 0 23151 2859 21150 194466 155157 155157 1 IELLCQDQVLDPNMDLRTVK Unmodified 2399.2189 0.21886626 3470 Q8TAF3 WDR48 WD repeat-containing protein 48 yes yes 0 0 1 By MS/MS 2 0 1 1 89.608 84.735 3 3.8233E-07 105348 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.538 36.033 18182000 0 18182000 0 0 0 0 0 0 0 0 0 0 0 0 0 23152 3470 21151 194467 155158 155158 1 IELLGSYDPQK Unmodified 1261.6554 0.65541781 1176 P24666 ACP1 Low molecular weight phosphotyrosine protein phosphatase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 71.595 69.545 2 1.3595E-05 87889 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.67 78.668 1823700000 39549000 1684000000 17798000 10501000 7925500 0 12871000 0 9900400 0 25986000 0 15184000 0 0 23153 1176 21152 194468;194469;194470;194471;194472;194473;194474;194475;194476;194477;194478;194479;194480;194481;194482;194483 155159;155160;155161;155162;155163;155164;155165;155166;155167;155168;155169;155170;155171;155172;155173;155174 155162 16 IELLIDAAR Unmodified 1012.5917 0.59169534 3213 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.252 76.31 2 0.016214 88133 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 56.729 6.1226 59515000 0 0 0 2697600 2783900 4840200 4361500 3025400 4194300 7152200 6110400 6143300 4692700 4504200 9009100 23154 3213 21153 194484;194485;194486;194487;194488;194489;194490;194491;194492;194493;194494;194495 155175;155176;155177 155175 3 IELPTQLHEK Unmodified 1206.6608 0.66083754 4258 Q9BZ29 DOCK9 Dedicator of cytokinesis protein 9 no no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.08 3.33 2 1 9 2 1 1 1 1 1 1 1 1 1 1 54.095 53.124 3 0.00075074 71191 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.171 67.143 121190000 0 53085000 24486000 0 0 4791500 0 329810 2278900 5333800 8346200 3714800 4926600 5910900 7985700 23155 4258 21154 194496;194497;194498;194499;194500;194501;194502;194503;194504;194505;194506;194507 155178;155179;155180;155181;155182;155183;155184;155185;155186;155187 155180 10 IELQRNPPPNADPNMK Unmodified 1832.9203 0.92031648 3737 Q96AE4 FUBP1 Far upstream element-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 42.225 42.464 3 0.002782 46552 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.514 44.368 33423000 0 0 0 2773200 0 0 5071900 0 0 5274900 0 9109100 0 0 11194000 23156 3737 21155 194508;194509;194510;194511;194512 155188 155188 0 IEMEQELQTLR Oxidation (M) 1404.6919 0.69187967 3385 Q8NB25 FAM184A Protein FAM184A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 1 1 2 2 2 2 1 1 2 1 90.047 90.14 2 0.0011488 102408 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 70.919 63.539 144830000 0 0 0 31174000 3293600 9031700 10020000 33166000 7150900 17513000 8079700 9118500 11919000 4359200 0 23157 3385 21156 194513;194514;194515;194516;194517;194518;194519;194520;194521;194522;194523;194524;194525;194526;194527;194528 155189;155190;155191;155192;155193;155194;155195;155196;155197;155198;155199;155200 155193 4949 11 IENESDMIR Oxidation (M) 1121.5023 0.50228798 125 O00186 STXBP3 Syntaxin-binding protein 3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 19.468 19.669 2 0.031631 20040 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 42.599 21.299 19256000 0 0 0 1714400 0 2623600 2171800 1480200 1237400 2623700 0 2712300 2548400 0 2144000 23158 125 21157 194529;194530;194531;194532;194533;194534;194535;194536;194537 155201;155202;155203;155204 155203 4 IENFAASQEDFPALLSK Unmodified 1878.9363 0.9363437 3355 Q8N612 FAM160A2 FTS and Hook-interacting protein yes yes 0 0 0 By MS/MS 2 0 1 1 90.817 85.921 2 4.9085E-63 106791 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 164.81 130.92 41573000 0 41573000 0 0 0 0 0 0 0 0 0 0 0 0 0 23159 3355 21158 194538 155205 155205 1 IENFDVSFGDR Unmodified 1297.5939 0.59388018 4653 Q9NUQ8 ABCF3 ATP-binding cassette sub-family F member 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.19 72.26 2 1.9273E-05 83321 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 125.48 113.24 201690000 0 0 0 7995100 9853000 17370000 12854000 32079000 9806200 16139000 17949000 22484000 16926000 12046000 26186000 23160 4653 21159 194539;194540;194541;194542;194543;194544;194545;194546;194547;194548;194549;194550 155206;155207;155208;155209;155210;155211;155212;155213;155214;155215 155207 5 IENHEGVR Unmodified 952.47264 0.47264284 1000 P14618 PKM Pyruvate kinase PKM yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6.3235 5.8191 2 0.0045582 3454 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.22 51.013 809230000 30565000 111080000 294040000 33500000 30850000 33782000 45778000 47364000 38344000 13437000 37229000 28262000 4637100 17591000 42766000 23161 1000 21160 194551;194552;194553;194554;194555;194556;194557;194558;194559;194560;194561;194562;194563;194564;194565 155216;155217;155218;155219;155220;155221;155222;155223;155224;155225;155226;155227;155228;155229 155219 14 IENIHIGEK Unmodified 1051.5662 0.56620887 128 O00203 AP3B1 AP-3 complex subunit beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.47 3.07 2 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34.526 33.691 2 0.0047785 36771 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 85.731 38.664 114030000 6943700 1794600 33988000 3874000 4792200 2922100 6024500 5426500 4131200 5135400 6291400 7599800 7672700 7678000 9753300 23162 128 21161 194566;194567;194568;194569;194570;194571;194572;194573;194574;194575;194576;194577;194578;194579;194580 155230;155231;155232;155233;155234;155235;155236;155237;155238;155239;155240;155241;155242;155243;155244 155238 15 IENLCAMGFDR Unmodified 1324.5904 0.59039149 1832 P61086 UBE2K Ubiquitin-conjugating enzyme E2 K yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 69.396 69.77 2 0.0062804 79781 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.595 41.82 6783400 0 0 0 0 0 0 0 0 0 0 1924600 0 0 0 4858800 23163 1832 21162 194581;194582;194583 155245;155246 155246 2 IENLTEEAFNTQVTALIK Unmodified 2033.0681 0.06808615 375 O43847 NRD1 Nardilysin yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 94.919 88.33 2;3 6.9385E-71 112910 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 213.67 149.8 61511000 61511000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23164 375 21163 194584;194585;194586 155247;155248;155249 155249 3 IENNAMVLSACVQK Unmodified 1575.7749 0.77489779 3246 Q8IWV7 UBR1 E3 ubiquitin-protein ligase UBR1 yes yes 0 0 0 By MS/MS 2 0 1 1 65.952 60.035 2 9.0987E-06 76930 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.08 85.745 43258000 0 43258000 0 0 0 0 0 0 0 0 0 0 0 0 0 23165 3246 21164 194587 155250 155250 1 IENSELLDK Unmodified 1059.5448 0.54480473 3073 Q7Z2W4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 40.417 35.364 2 0.01751 40413 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 87.476 31.8 38303000 0 38303000 0 0 0 0 0 0 0 0 0 0 0 0 0 23166 3073 21165 194588;194589;194590;194591 155251;155252;155253;155254 155252 4 IENVETLVLQAPK Unmodified 1452.8188 0.81879474 631 O95235 KIF20A Kinesin-like protein KIF20A yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 81.595 81.638 2 0.013088 94263 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 51.092 36.885 17116000 0 0 0 674770 0 2893400 1686200 0 0 3692600 3135800 3132300 1901200 0 0 23167 631 21166 194592;194593;194594;194595;194596;194597;194598 155255;155256;155257 155256 3 IENVPTGPNNKPK Unmodified 1406.7518 0.75177781 331 O43447 PPIH Peptidyl-prolyl cis-trans isomerase H yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 24.11 23.2 3 0.00054231 24188 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 75.479 44.928 346230000 14697000 159930000 7158600 8344000 10680000 8511800 11153000 11199000 6345300 12286000 12951000 26115000 18904000 14466000 23489000 23168 331 21167 194599;194600;194601;194602;194603;194604;194605;194606;194607;194608;194609;194610;194611;194612;194613;194614 155258;155259;155260;155261;155262;155263;155264;155265;155266;155267;155268;155269;155270;155271;155272 155270 13 IENVVLVVPVK Unmodified 1207.754 0.75400964 4578 Q9NQW7 XPNPEP1 Xaa-Pro aminopeptidase 1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 80.328 80.488 2 0.0035122 92660 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.067 54.755 35370000 0 0 0 0 0 0 970050 0 0 2005000 5422500 6094200 0 3597600 17281000 23169 4578 21168 194615;194616;194617;194618;194619;194620 155273;155274;155275 155273 3 IENYLLR Unmodified 919.51272 0.51271674 2833 Q5VZK9 LRRC16A Leucine-rich repeat-containing protein 16A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 2 1 2 1 57.177 57.354 2 0.0030402 62392 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 141.98 27.445 104460000 0 0 0 0 8709300 0 0 9446400 0 0 23147000 0 17810000 17338000 28011000 23170 2833 21169 194621;194622;194623;194624;194625;194626;194627;194628 155276;155277;155278;155279;155280;155281;155282;155283 155278 8 IEPADAHVLQK Unmodified 1219.6561 0.65608651 4310 Q9GZZ1 NAA50 N-alpha-acetyltransferase 50 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 20 2 2 2 2 2 2 2 2 2 1 1 36.082 36.193 2;3 3.1186E-08 39379 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 133.57 56.516 4392600000 0 0 0 282600000 510090000 323230000 340990000 225990000 282420000 533630000 546790000 1339700000 3643500 3499600 0 23171 4310 21170 194629;194630;194631;194632;194633;194634;194635;194636;194637;194638;194639;194640;194641;194642;194643;194644;194645;194646;194647;194648 155284;155285;155286;155287;155288;155289;155290;155291;155292;155293;155294;155295;155296;155297;155298;155299;155300 155297 4 IEPDMMGVEHGFETASHEGEAGPSAEALQ Unmodified 3025.307 0.30696558 3966 Q96RE7 NACC1 Nucleus accumbens-associated protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 83.357 79.352 3 0.03213 98730 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 17.65 16.93 66014000 0 66014000 0 0 0 0 0 0 0 0 0 0 0 0 0 23172 3966 21171 194649;194650 155301;155302 155301 2 IEPELDGSAQVTSHDASTNGLINFIK Unmodified 2755.3665 0.36645302 829 P06744 GPI Glucose-6-phosphate isomerase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 89.435 84.767 3 3.3125E-22 106626 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.272 72.766 160030000 11982000 140520000 7526700 0 0 0 0 0 0 0 0 0 0 0 0 23173 829 21172 194651;194652;194653;194654 155303;155304;155305;155306;155307 155303 5 IEPELDGSSPVTSHDSSTNGLINFIK Unmodified 2756.3505 0.3504686 93 CON__Q3ZBD7 yes yes 0 0 0 By MS/MS 2 0 1 1 90.904 82.773 3 8.869E-05 107464 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.746 31.124 + 10540000 10540000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23174 93 21173 194655 155308 155308 1 IEPEPFENCLLRPGSPAR Unmodified 2081.0364 0.036408866 1547 P48637 GSS Glutathione synthetase yes yes 0 0 1 By matching By MS/MS By MS/MS 10 0 3 1 1 1 76.666 76.874 3 0.0044532 88252 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 34.721 26.012 23514000 0 0 0 0 0 0 0 0 0 0 4721900 0 0 3385800 15406000 23175 1547 21174 194656;194657;194658 155309 155309 1 IEPGAEALR Unmodified 954.51345 0.51344502 3205 Q86Y91 KIF18B Kinesin-like protein KIF18B yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 35.206 35.366 2 0.022744 38412 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 51.346 22.196 29409000 0 0 0 0 3907200 4829100 4326800 0 0 5662600 6128900 0 0 0 4554700 23176 3205 21175 194659;194660;194661;194662;194663;194664 155310 155310 1 IEPGIEPQR Unmodified 1037.5506 0.55055881 1795 P57682 KLF3 Krueppel-like factor 3 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 34.027 34.221 2 0.045968 37532 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 43.083 9.5673 83096000 0 0 0 0 3953700 5965600 9244000 0 9203200 9196200 13285000 12648000 8828800 10772000 0 23177 1795 21176 194665;194666;194667;194668;194669;194670;194671;194672;194673 155311 155311 1 IEPGSLNEEPFMK Unmodified 1489.7123 0.71228076 3981 Q96S38 RPS6KC1 Ribosomal protein S6 kinase delta-1 yes yes 0 0 0 By MS/MS 2 0 1 1 76.605 71.768 2 0.0021755 89665 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.297 59.028 18560000 0 18560000 0 0 0 0 0 0 0 0 0 0 0 0 0 23178 3981 21177 194674 155312 155312 1 IEPGTAADSQQIHEEK Unmodified 1751.8326 0.83260691 4236 Q9BXW9 FANCD2 Fanconi anemia group D2 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 7 3.69 1 1 3 2 1 1 1 29.061 27.448 3 0.00019399 33398 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 84.14 66.858 60439000 0 44687000 0 0 0 6776300 0 0 2595800 0 0 0 0 0 6380100 23179 4236 21178 194675;194676;194677;194678;194679 155313;155314;155315;155316;155317 155317 5 IEPGVDPDDTYNETPYEK Unmodified 2080.9113 0.91131074 4394 Q9H4A4 RNPEP Aminopeptidase B yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 6.33 4.11 1 3 5 2 1 1 1 1 1 1 1 66.002 64.479 2 1.3817E-26 72036 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 156.08 139.06 137070000 69716000 36553000 1017000 2759500 0 0 0 0 0 0 6587800 0 0 3034000 17404000 23180 4394 21179 194680;194681;194682;194683;194684;194685;194686;194687;194688 155318;155319;155320;155321;155322;155323;155324;155325 155319 8 IEPGVSVSLVNPQPSNGHFSTK Unmodified 2293.1703 0.17025981 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.182 72.252 3 0.00028014 83069 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 22.763 19.686 141380000 0 0 0 3994900 5613100 15402000 7857500 10172000 5680300 15076000 15489000 17380000 7781300 10859000 26078000 23181 4819 21180 194689;194690;194691;194692;194693;194694;194695;194696;194697;194698;194699;194700 155326;155327;155328;155329;155330;155331;155332;155333;155334;155335;155336;155337 155333 12 IEPHHTAVLGEGDSVQVENK Unmodified 2158.0655 0.065460388 172 O00625 PIR Pirin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.62 3.61 7 2 4 1 4 4 1 1 1 1 45.499 42.261 2;3;4 2.091E-103 56163 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 173.49 156.61 1321000000 85023000 376770000 748470000 0 0 0 0 0 0 0 23389000 13875000 0 20088000 53376000 23182 172 21181 194701;194702;194703;194704;194705;194706;194707;194708;194709;194710;194711;194712;194713 155338;155339;155340;155341;155342;155343;155344;155345;155346;155347;155348;155349;155350;155351;155352 155340 12 IEPHHTAVLGEGDSVQVENKDPK Unmodified 2498.2401 0.24013029 172 O00625 PIR Pirin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 5 2 1 2 46.468 40.761 3;4 0.0010773 56242 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.363 41.843 136030000 58636000 22476000 54913000 0 0 0 0 0 0 0 0 0 0 0 0 23183 172 21182 194714;194715;194716;194717;194718 155353;155354;155355;155356 155354 4 IEPHTGLLLLSVQK Unmodified 1546.9083 0.90827845 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.573 78.631 3 8.4662E-13 90314 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 106.32 103.48 94346000 0 0 0 8768400 5422400 9573400 6903500 7115300 7930600 5636100 6330100 9669700 6211400 6470900 14314000 23184 1029 21183 194719;194720;194721;194722;194723;194724;194725;194726;194727;194728;194729;194730 155357;155358;155359;155360;155361;155362;155363;155364;155365;155366;155367;155368;155369 155360 13 IEPIPGESPK Unmodified 1065.5706 0.57062555 437 O60841 EIF5B Eukaryotic translation initiation factor 5B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 40.209 39.447 2 0.0030867 49299 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.033 53.586 1134200000 0 702210000 2461000 28897000 20808000 38539000 31568000 25581000 26419000 48764000 42521000 48556000 38284000 28951000 50675000 23185 437 21184 194731;194732;194733;194734;194735;194736;194737;194738;194739;194740;194741;194742;194743;194744;194745;194746 155370;155371;155372;155373;155374;155375;155376;155377;155378;155379;155380;155381;155382;155383 155373 9 IEPLGYCEDAESNRQLESTEFNK Unmodified 2728.2286 0.22863891 3631 Q92576 PHF3 PHD finger protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.36 2.01 1 10 1 1 1 1 1 1 1 1 1 1 1 69.193 68.967 3 8.3932E-09 78629 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.165 55.805 68921000 0 2610500 0 0 4574500 6924700 0 4272100 5380700 9184800 5635900 6350000 5777100 4945000 13266000 23186 3631 21185 194747;194748;194749;194750;194751;194752;194753;194754;194755;194756;194757 155384;155385;155386;155387;155388;155389;155390;155391;155392;155393;155394;155395;155396;155397;155398 155386 15 IEPPDTGLYYDEYLK Unmodified 1814.8614 0.86144742 1992 P80303 NUCB2 Nucleobindin-2;Nesfatin-1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching 5.57 3.85 3 1 3 3 1 1 1 1 83.702 81.605 2;3 0.0005488 100669 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.697 76.762 237580000 0 221190000 1812900 0 0 0 0 0 0 0 3108100 3405600 0 0 8069600 23187 1992 21186 194758;194759;194760;194761;194762;194763;194764 155399;155400;155401;155402;155403;155404 155399 5 IEPPGLFR Unmodified 927.5178 0.51780212 945 P11387;Q969P6 TOP1;TOP1MT DNA topoisomerase 1;DNA topoisomerase I, mitochondrial yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.974 68.054 2 0.015415 77802 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 68.915 39.073 92933000 0 0 0 4199100 4127700 6698800 8273800 7127500 5923000 10983000 9152800 12955000 7669100 6552500 9271000 23188 945 21187 194765;194766;194767;194768;194769;194770;194771;194772;194773;194774;194775;194776 155405;155406 155406 2 IEPREPNLEPMVEK Unmodified 1679.8553 0.8552566 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 59.334 58.399 3 0.0002605 65881 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.022 36.738 275960000 0 35729000 17358000 12235000 12646000 0 19353000 14332000 15223000 18066000 19759000 31037000 21174000 25825000 33220000 23189 5216 21188 194777;194778;194779;194780;194781;194782;194783;194784;194785;194786;194787;194788;194789;194790;194791 155407;155408;155409;155410;155411;155412;155413;155414;155415;155416;155417;155418;155419;155420;155421;155422;155423;155424;155425;155426;155427 155425 21 IEPREPNLEPMVEK Oxidation (M) 1695.8502 0.85017123 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.83 2.61 1 5 1 1 1 1 1 1 48.949 48.374 3 0.0001769 54501 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 68.283 43.348 192230000 0 4661900 0 0 21106000 0 0 0 0 35633000 0 46210000 46817000 0 37801000 23190 5216 21188 194792;194793;194794;194795;194796;194797 155428;155429;155430;155431;155432;155433 155431 6620 6 IEPSINHILSTR Unmodified 1378.7569 0.75686319 413 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.456 65.544 3 1.7193E-05 74088 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.362 58.986 86632000 0 0 0 4353500 2793900 8616800 5950500 4529700 4212700 8838100 7471700 9991200 6976300 8338000 14559000 23191 413 21189 194798;194799;194800;194801;194802;194803;194804;194805;194806;194807;194808;194809 155434;155435;155436;155437;155438;155439;155440;155441;155442;155443;155444;155445;155446 155437 13 IEPSVNFLK Unmodified 1045.5808 0.5807963 2208 Q12907 LMAN2 Vesicular integral-membrane protein VIP36 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 72.621 72.092 2 0.00053331 83026 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 145.34 53.441 1152400000 0 795530000 15140000 22991000 0 0 29595000 29388000 19715000 32555000 41142000 45208000 35780000 33490000 51890000 23192 2208 21190 194810;194811;194812;194813;194814;194815;194816;194817;194818;194819;194820;194821 155447;155448;155449;155450;155451;155452;155453;155454;155455;155456 155447 7 IEQAMDLVK Unmodified 1045.5478 0.54778161 2565;5172;4027 Q9Y3Q8;O75157;Q15714;Q99576 TSC22D4;TSC22D2;TSC22D1;TSC22D3 TSC22 domain family protein 4;TSC22 domain family protein 2;TSC22 domain family protein 1;TSC22 domain family protein 3 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.18 3.74 3 1 7 1 2 1 1 1 1 1 1 1 1 55.435 53.22 2 0.00076164 68135 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.15 70.796 740520000 7142600 499190000 2549900 25836000 0 0 28417000 33022000 0 47627000 0 0 0 37243000 59492000 23193 5172;2565;4027 21191 194822;194823;194824;194825;194826;194827;194828;194829;194830;194831;194832 155457;155458;155459;155460;155461;155462;155463;155464;155465;155466;155467;155468;155469;155470;155471 155462 14 IEQAMDLVK Oxidation (M) 1061.5427 0.54269624 2565;5172;4027 Q9Y3Q8;O75157;Q15714;Q99576 TSC22D4;TSC22D2;TSC22D1;TSC22D3 TSC22 domain family protein 4;TSC22 domain family protein 2;TSC22 domain family protein 1;TSC22 domain family protein 3 no no 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 37.607 36.424 2 0.001475 45656 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 133.23 69.669 99745000 3916900 41648000 1455100 4759400 3444000 5777600 6616300 0 3459400 6947100 6867300 7795600 7058800 0 0 23194 5172;2565;4027 21191 194833;194834;194835;194836;194837;194838;194839;194840;194841;194842;194843;194844;194845 155472;155473;155474;155475;155476;155477;155478;155479 155474 4217 8 IEQEFLTEALPVK Unmodified 1515.8185 0.81846039 1301 P31350 RRM2 Ribonucleoside-diphosphate reductase subunit M2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 83.431 83.494 2 4.6133E-13 96214 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 155.15 107.33 328700000 0 0 0 6010800 10172000 14174000 13981000 18489000 19103000 41658000 36794000 30725000 21565000 34359000 81664000 23195 1301 21192 194846;194847;194848;194849;194850;194851;194852;194853;194854;194855;194856;194857 155480;155481;155482;155483;155484;155485;155486;155487;155488;155489;155490;155491;155492;155493;155494;155495 155485 16 IEQELTAAK Unmodified 1001.5393 0.53932542 4390 Q9H444 CHMP4B Charged multivesicular body protein 4b yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 28.395 24.1 2 0.00050037 31537 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.23 23.779 43316000 0 43316000 0 0 0 0 0 0 0 0 0 0 0 0 0 23196 4390 21193 194858;194859 155496 155496 1 IEQFVYSSPHDNK Unmodified 1562.7365 0.73652168 1580 P49591 SARS Serine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 7 3.69 1 1 3 2 1 1 1 44.218 41.867 2 1.0834E-19 54943 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 174.87 150 184540000 0 166670000 0 0 0 0 0 0 0 0 0 0 0 5141600 12729000 23197 1580 21194 194860;194861;194862;194863;194864 155497;155498;155499;155500;155501 155497 4 IEQISSITNQELK Unmodified 1501.7988 0.79878758 3917 Q96LB3 IFT74 Intraflagellar transport protein 74 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 2 1 1 1 1 1 1 1 1 1 37.628 37.67 3 0.026825 41713 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 21.775 14.717 87511000 0 0 0 6666800 3827000 7228100 14278000 9340300 7095700 8209900 0 0 9392500 7818900 13654000 23198 3917 21195 194865;194866;194867;194868;194869;194870;194871;194872;194873;194874;194875 155502;155503;155504;155505;155506;155507 155504 6 IEQLQNHENEDIYK Unmodified 1771.8377 0.83769228 173 O00629 KPNA4 Importin subunit alpha-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.71 2.89 3 1 20 3 1 1 1 2 2 1 1 2 2 2 2 2 2 40.342 39.751 2;3 1.1256E-58 51406 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 223.22 211.58 901300000 0 342050000 12188000 22863000 19806000 44365000 41769000 27039000 19542000 49511000 61186000 62703000 55276000 37985000 105020000 23199 173 21196 194876;194877;194878;194879;194880;194881;194882;194883;194884;194885;194886;194887;194888;194889;194890;194891;194892;194893;194894;194895;194896;194897;194898;194899 155508;155509;155510;155511;155512;155513;155514;155515;155516;155517;155518;155519;155520;155521;155522;155523;155524 155512 16 IEQSQHLFQAHK Unmodified 1464.7474 0.74736113 1712 P53367 ARFIP1 Arfaptin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28.167 27.643 3 9.8097E-06 41427 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 102.4 88.143 361570000 106360000 0 8398500 13424000 10940000 29865000 17670000 17687000 13301000 23205000 16555000 31037000 19859000 14281000 38988000 23200 1712 21197 194900;194901;194902;194903;194904;194905;194906;194907;194908;194909;194910;194911;194912;194913 155525;155526;155527;155528;155529;155530;155531;155532;155533;155534;155535;155536 155531 8 IEQVDKEDEITEK Unmodified 1574.7675 0.76754703 5125 Q9Y2X3 NOP58 Nucleolar protein 58 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 30.417 30.207 3 3.6292E-08 33283 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 103.76 89.678 206390000 0 10448000 0 12977000 12833000 13888000 13972000 15237000 14687000 20134000 19084000 25587000 22040000 0 25507000 23201 5125 21198 194914;194915;194916;194917;194918;194919;194920;194921;194922;194923;194924;194925;194926;194927 155537;155538;155539;155540;155541;155542;155543;155544;155545;155546;155547;155548;155549;155550;155551;155552;155553 155552 17 IEQVFALQNATGDGK Unmodified 1589.8049 0.80493559 4259 Q9BZ95 WHSC1L1 Histone-lysine N-methyltransferase NSD3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 69.097 69.186 2 0.0047868 78699 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.414 31.197 18124000 0 0 0 0 1095000 0 2034100 2810200 1435900 3570700 1913100 0 2287200 2978200 0 23202 4259 21199 194928;194929;194930;194931;194932;194933;194934;194935;194936 155554;155555;155556;155557 155555 4 IERDAQEMADSLGVR Unmodified 1688.8152 0.8151827 437 O60841 EIF5B Eukaryotic translation initiation factor 5B yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 58.929 59.159 3 0.0044395 66584 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.856 29.911 38194000 0 0 0 0 0 3658600 2909600 3856300 0 4267100 6199900 0 3148700 4730700 9423300 23203 437 21200 194937;194938;194939;194940;194941;194942;194943;194944 155558;155559 155559 2 IEREGECQR Unmodified 1175.5353 0.53531945 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 5.7203 5.8103 3 0.0021918 3550 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 77.379 66.159 105110000 0 0 0 8295500 8688700 12767000 15529000 14422000 11680000 0 9360900 10006000 5952400 8404200 0 23204 894 21201 194945;194946;194947;194948;194949;194950;194951;194952;194953;194954;194955 155560;155561;155562;155563;155564;155565;155566;155567;155568;155569;155570 155565 11 IEREGECQRYK Unmodified 1466.6936 0.693611 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 0 2 By MS/MS 2 0 1 1 11.196 7.3224 3 0.014523 11602 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.17 58.919 52532000 52532000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23205 894 21202 194956 155571 155571 1 IERGEDPPPDIFAAADSK Unmodified 1926.9323 0.93232095 183 O14497 ARID1A AT-rich interactive domain-containing protein 1A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 65.59 65.806 3 4.7865E-06 74585 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.548 68.657 31628000 0 0 0 0 0 3897100 2752600 0 0 5027100 6200000 0 0 5053800 8697700 23206 183 21203 194957;194958;194959;194960;194961;194962;194963 155572;155573;155574;155575;155576;155577;155578 155575 7 IERGEEPPPEVFSTGDTK Unmodified 1986.9535 0.95345032 3444 Q8NFD5 ARID1B AT-rich interactive domain-containing protein 1B yes yes 0 0 1 By MS/MS 3 0 1 1 56.927 52.074 3 0.02861 64164 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 29.274 23.293 2064800 0 2064800 0 0 0 0 0 0 0 0 0 0 0 0 0 23207 3444 21204 194964 155579 155579 1 IERLDTDDLDEIEK Unmodified 1702.8261 0.82612454 4655;5016 Q9NUU7;Q9UMR2 DDX19A;DDX19B ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX19B no no 0 0 1 By MS/MS 2 0 1 1 71.14 65.323 3 0.0077042 83191 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 56.793 45.523 45715000 0 45715000 0 0 0 0 0 0 0 0 0 0 0 0 0 23208 4655;5016 21205 194965 155580 155580 0 IERPVTVFLQLK Unmodified 1441.8657 0.86568536 2042 Q00653 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit yes yes 0 0 1 By MS/MS 10 0 1 1 80.645 80.86 3 0.047576 93255 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 30.205 17.575 3994000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3994000 23209 2042 21206 194966 155581 155581 1 IERRQQEVETELK Unmodified 1656.8795 0.87949752 868 P08621 SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa yes yes 0 0 2 By MS/MS By MS/MS 2 0 3 2 1 30.015 25.168 3;4 0.030753 35369 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 41.092 33.89 411060000 406380000 0 4677900 0 0 0 0 0 0 0 0 0 0 0 0 23210 868 21207 194967;194968;194969 155582;155583 155583 1 IERTVQIEASTVEIEERGVK Unmodified 2285.2227 0.22268931 2474 Q15019 SEPT2 Septin-2 yes yes 0 0 2 By MS/MS 2.5 0.5 1 1 2 72.822 66.226 3;4 5.4707E-71 87652 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 142.43 118.2 22934000 22934000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23211 2474 21208 194970;194971 155584;155585 155585 2 IESDRVIGSVGK Unmodified 1258.6881 0.68811492 4982 Q9UL03 INTS6 Integrator complex subunit 6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 4 3.46 3 1 1 2 1 38.058 35.236 2;3 0.018849 44496 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 49.448 18.836 53911000 0 17984000 20624000 0 0 0 0 0 0 0 0 15302000 0 0 0 23212 4982 21209 194972;194973;194974;194975 155586;155587;155588 155586 0 IESDVQEPTEPEDDLDIMLGNK Oxidation (M) 2502.1319 0.13194455 1099 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.86 3.4 1 1 5 1 1 1 1 1 1 1 78.271 76.932 3 6.5191E-22 89747 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 75.224 71.42 90186000 1115800 62174000 0 0 0 8975700 4140900 0 6816000 0 0 0 0 6963400 0 23213 1099 21210 194976;194977;194978;194979;194980;194981;194982 155589;155590;155591;155592;155593;155594;155595;155596;155597 155597 1573 9 IESDVQEPTEPEDDLDIMLGNK Unmodified 2486.137 0.13702993 1099 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.2 3.82 3 2 5 1 4 1 1 1 1 1 86.387 84.019 2;3 3.0598E-84 104106 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 181.26 174.57 623100000 21698000 581580000 0 0 0 4668300 0 0 0 0 4845900 5240000 1959000 3106100 0 23214 1099 21210 194983;194984;194985;194986;194987;194988;194989;194990;194991;194992 155598;155599;155600;155601;155602;155603;155604;155605 155600 7 IESDVQEPTEPEDDLDIMLGNKK Oxidation (M) 2630.2269 0.22690757 1099 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 77.006 70.522 3 1.4747E-07 89847 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.651 52.931 49634000 11420000 38214000 0 0 0 0 0 0 0 0 0 0 0 0 0 23215 1099 21211 194993;194994 155606;155607;155608 155607 1573 3 IESDVQEPTEPEDDLDIMLGNKK Unmodified 2614.232 0.23199295 1099 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 0 0 1 By MS/MS 2 0 1 1 85.209 77.079 3 0.00014994 100606 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 59.614 46.556 13357000 13357000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23216 1099 21211 194995 155609;155610 155610 2 IESETPVDLASSMPSSR Unmodified 1804.8513 0.85129344 4894 Q9UHB7 AFF4 AF4/FMR2 family member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 71.11 71.17 2 0.0001112 81831 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 83.617 69.955 36457000 0 0 0 2178200 2426300 3075100 2867700 2923000 0 4392000 4905300 5370600 0 3914200 4404500 23217 4894 21212 194996;194997;194998;194999;195000;195001;195002;195003;195004;195005 155611;155612;155613;155614;155615 155615 5 IESETPVDLASSMPSSRHK Unmodified 2070.0052 0.0051683175 4894 Q9UHB7 AFF4 AF4/FMR2 family member 4 yes yes 0 0 1 By MS/MS 2 0 1 1 66.822 58.527 4 0.026061 78403 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 30.152 21.105 15063000 15063000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23218 4894 21213 195006 155616 155616 1 IESFVETLK Unmodified 1064.5754 0.57537657 1598 P49770 EIF2B2 Translation initiation factor eIF-2B subunit beta yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 66.751 66.744 2 0.022062 76636 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.736 25.321 46393000 0 0 0 2678600 3136800 10206000 0 0 3988000 5597500 0 0 5341000 6585900 8859100 23219 1598 21214 195007;195008;195009;195010;195011;195012;195013;195014 155617 155617 1 IESGELDPER Unmodified 1143.5408 0.54078198 1103 P20338 RAB4A Ras-related protein Rab-4A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 33.505 33.692 2 0.0050568 37424 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 79.974 31.816 257880000 0 0 0 14017000 14601000 22490000 18868000 0 14222000 24383000 29571000 42103000 27678000 19585000 30359000 23220 1103 21215 195015;195016;195017;195018;195019;195020;195021;195022;195023;195024;195025 155618;155619;155620;155621;155622;155623;155624;155625;155626;155627;155628 155627 11 IESGELDPERMGSGIQYGDAALR Oxidation (M) 2479.1649 0.16491644 1103 P20338 RAB4A Ras-related protein Rab-4A yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 67.094 67.38 3 8.2078E-08 77144 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 56.766 51.509 49063000 0 0 0 0 0 0 6552700 0 0 0 9376200 11113000 6350500 5122100 10548000 23221 1103 21216 195026;195027;195028;195029;195030;195031 155629;155630;155631;155632;155633;155634 155634 1586 6 IESGELDPERMGSGIQYGDAALR Unmodified 2463.17 0.17000181 1103 P20338 RAB4A Ras-related protein Rab-4A yes yes 0 0 1 By MS/MS By matching By MS/MS 10 0 3 1 1 1 76.624 76.824 3 3.651E-10 88278 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.045 53.563 18325000 0 0 0 0 0 0 0 4093800 0 0 0 0 0 3135700 11095000 23222 1103 21216 195032;195033;195034 155635;155636 155635 2 IESGGGNILIHHSR Unmodified 1488.7797 0.77972389 3087 Q7Z3U7 MON2 Protein MON2 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 31.475 31.753 3 0.0023571 34880 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 63.709 31.211 52701000 0 0 0 0 0 17905000 0 4568200 0 7842300 0 0 5279100 4376500 12730000 23223 3087 21217 195035;195036;195037;195038;195039;195040 155637;155638;155639;155640 155637 2 IESHETANLQDDRNSQSSSVSYLESK Unmodified 2923.3432 0.34315139 3631 Q92576 PHF3 PHD finger protein 3 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 47.888 47.617 4 5.4831E-15 52596 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.775 59.412 75848000 0 0 6562900 0 0 7151800 0 11191000 6077500 11876000 0 15820000 0 0 17169000 23224 3631 21218 195041;195042;195043;195044;195045;195046;195047 155641;155642;155643;155644;155645 155642 5 IESHRHELQGQK Unmodified 1460.7484 0.74842377 4616 Q9NRY5 FAM114A2 Protein FAM114A2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 2 6.4772 6.6805 3 0.00058985 4882 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 94.465 67.933 48288000 0 0 0 0 0 3570200 0 5134000 3352600 3333700 3840500 3569600 9111800 3965400 12411000 23225 4616 21219 195048;195049;195050;195051;195052;195053;195054;195055;195056;195057 155646;155647;155648;155649;155650 155649 5 IESIQLMMDSETGR Oxidation (M) 1624.7437 0.74365724 2410 Q14498 RBM39 RNA-binding protein 39 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 65.782 65.792 2 9.6368E-05 75731 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 82.379 66.488 30773000 0 0 0 0 3223400 8559900 5247400 0 0 0 9033200 0 4708700 0 0 23226 2410 21220 195058;195059;195060;195061;195062;195063 155651;155652;155653;155654;155655 155655 3953;3954 5 IESIQLMMDSETGR Unmodified 1608.7487 0.74874262 2410 Q14498 RBM39 RNA-binding protein 39 yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 78.152 78.311 2 0.0003597 90060 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.767 65.809 20906000 0 0 0 0 0 0 0 0 0 8088200 0 0 0 5232600 7585300 23227 2410 21220 195064;195065;195066 155656 155656 1 IESIQLMMDSETGR 2 Oxidation (M) 1640.7386 0.73857187 2410 Q14498 RBM39 RNA-binding protein 39 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 50.511 50.307 2 0.00053473 57679 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 56.359 48.434 9358000 0 0 0 4248600 0 0 0 0 0 0 0 0 0 5109500 0 23228 2410 21220 195067;195068;195069 155657;155658;155659 155658 3953;3954 3 IESLEQEK Unmodified 974.49204 0.49204087 232 O14974 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes yes 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.029 21.236 2 0.0048222 21567 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 113.89 40.273 107840000 0 0 0 6360500 10014000 4944700 8949000 7144600 3652900 10151000 10424000 15012000 11063000 8141900 11984000 23229 232 21221 195070;195071;195072;195073;195074;195075;195076;195077;195078;195079;195080;195081 155660;155661;155662;155663;155664 155663 5 IESLPPLLIGK Unmodified 1178.7275 0.72746054 3378 Q8N9N7 LRRC57 Leucine-rich repeat-containing protein 57 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86.142 85.674 2 0.00033979 98814 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 99.802 90.939 166240000 0 43067000 1153600 4396400 6717100 12625000 10577000 8971900 6695800 12755000 11335000 13309000 7606800 9456900 17573000 23230 3378 21222 195082;195083;195084;195085;195086;195087;195088;195089;195090;195091;195092;195093;195094;195095 155665;155666;155667;155668;155669;155670;155671;155672;155673;155674;155675;155676;155677;155678;155679 155669 15 IESPEEISLLPK Unmodified 1353.7391 0.73914744 1611 P49914 MTHFS 5-formyltetrahydrofolate cyclo-ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.089 79.146 2 1.7634E-05 91318 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 113.93 84.84 249220000 0 0 0 15922000 37361000 32166000 11791000 18704000 12001000 30315000 35142000 44881000 0 3888600 7045000 23231 1611 21223 195096;195097;195098;195099;195100;195101;195102;195103;195104;195105;195106 155680;155681;155682;155683;155684;155685;155686;155687;155688;155689 155686 10 IESPHPVDWNDTK Unmodified 1536.7209 0.72087161 4373 Q9H2U1 DHX36 ATP-dependent RNA helicase DHX36 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 52.009 47.152 3 0.021579 61454 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 36.572 30.849 82936000 0 78264000 4671800 0 0 0 0 0 0 0 0 0 0 0 0 23232 4373 21224 195107;195108 155690 155690 1 IESSGVTYFWR Unmodified 1343.651 0.65100113 4973 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 yes yes 0 0 0 By MS/MS By matching By matching By matching 10 0 4 1 1 1 1 77.855 77.975 2 0.0022781 90091 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 79.974 58.51 16983000 0 0 0 0 0 4616800 0 0 0 3340600 0 0 0 2884900 6140800 23233 4973 21225 195109;195110;195111;195112 155691 155691 1 IESVHFSDQFSGPK Unmodified 1576.7522 0.75217174 3731 Q96A33 CCDC47 Coiled-coil domain-containing protein 47 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 61.3 61.075 3 0.0021096 69557 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 42.242 32.73 56992000 0 0 5890900 3316700 3139000 3864400 3591200 4687700 3528900 6043500 5370100 6009200 5576800 0 5973300 23234 3731 21226 195113;195114;195115;195116;195117;195118;195119;195120;195121;195122;195123;195124 155692;155693;155694;155695;155696;155697;155698 155695 6 IESVLSSSGK Unmodified 1005.5342 0.53424004 1064 P17900 GM2A Ganglioside GM2 activator;Ganglioside GM2 activator isoform short yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 31.444 31.553 2 0.0064586 34466 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 64.841 16.992 92028000 0 0 0 48897000 13041000 0 0 15104000 0 0 5777700 9207700 0 0 0 23235 1064 21227 195125;195126;195127;195128;195129 155699;155700;155701;155702;155703 155702 3 IETALTSLHQR Unmodified 1267.6884 0.68844927 2584 Q15818 NPTX1 Neuronal pentraxin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 42.536 42.786 3 0.013723 47902 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 42.243 27.041 95231000 0 0 0 0 7854900 6733200 7110100 7110300 0 10218000 12570000 10215000 9871100 7467900 16081000 23236 2584 21228 195130;195131;195132;195133;195134;195135;195136;195137;195138;195139 155704;155705 155705 2 IETAQELK Unmodified 930.50221 0.50221163 4192 Q9BVL2 NUPL1 Nucleoporin p58/p45 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 23.55 23.79 2 0.017561 23828 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.465 10.689 247520000 0 0 0 0 15675000 13665000 18421000 21325000 14924000 20235000 26345000 31031000 30401000 21593000 33904000 23237 4192 21229 195140;195141;195142;195143;195144;195145;195146;195147;195148;195149;195150 155706;155707;155708;155709 155706 4 IETAVTSTPSASGQFSK Unmodified 1709.8472 0.84719434 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 2 1 1 1 1 48.996 48.451 2 1.4249E-57 60534 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 157.52 138.27 196800000 0 49566000 0 12460000 12411000 16865000 15048000 24109000 16102000 0 0 31175000 0 19061000 0 23238 1364 21230 195151;195152;195153;195154;195155;195156;195157;195158;195159;195160 155710;155711;155712;155713;155714;155715;155716;155717;155718;155719;155720 155713 11 IETDERDSTNR Unmodified 1334.6062 0.60623578 1241 P29083 GTF2E1 General transcription factor IIE subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 7.1169 7.1884 3 0.028997 4154 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 29.341 21.43 25555000 0 0 0 2758600 2008400 4265300 1068000 3201800 2037300 4849700 0 2338900 0 3026600 0 23239 1241 21231 195161;195162;195163;195164;195165;195166;195167;195168;195169 155721;155722 155722 2 IETELRDICNDVLSLLEK Unmodified 2159.1144 0.11438442 1940 P63104 YWHAZ 14-3-3 protein zeta/delta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.23 0.576 1 8 4 5 6 2 100.8 97.072 2;3 4.3399E-77 119470 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 186.05 159.9 1797900000 1207000000 580650000 10250000 0 0 0 0 0 0 0 0 0 0 0 0 23240 1940 21232 195170;195171;195172;195173;195174;195175;195176;195177;195178;195179;195180;195181;195182 155723;155724;155725;155726;155727;155728;155729;155730;155731;155732;155733;155734;155735;155736 155726 13 IETELVCVTTHFK Unmodified 1575.7967 0.79667909 445 O60921 HUS1 Checkpoint protein HUS1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 78.913 73.502 3 0.0006847 95067 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.089 63.989 16306000 12209000 0 4096200 0 0 0 0 0 0 0 0 0 0 0 0 23241 445 21233 195183;195184 155737;155738 155737 2 IETIAASSTPTPIRK Unmodified 1583.8883 0.88827129 3943 Q96P47 AGAP3 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 46.846 47.07 3 0.0028425 51906 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 25.423 15.644 65448000 0 0 0 0 4546800 5225800 6315700 4829600 2717600 8779400 6099500 11824000 0 5184700 9924600 23242 3943 21234 195185;195186;195187;195188;195189;195190;195191;195192;195193;195194 155739;155740;155741;155742;155743 155741 5 IETIEVMEDR Oxidation (M) 1249.586 0.58601761 1679 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.225 43.399 2 0.00060747 48812 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 113.62 76.064 126460000 0 0 0 9302600 5580500 7236900 8121300 6278400 5028300 10266000 14693000 15384000 15243000 10174000 19148000 23243 1679 21235 195195;195196;195197;195198;195199;195200;195201;195202;195203;195204;195205;195206 155744;155745;155746;155747;155748;155749;155750;155751;155752;155753;155754;155755 155744 2687 12 IETIEVMEDR Unmodified 1233.5911 0.59110299 1679 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 60.748 60.542 2 0.00059735 69961 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 131.44 86.992 78678000 0 0 0 17914000 18214000 0 0 0 0 0 0 0 19083000 23468000 0 23244 1679 21235 195207;195208;195209;195210;195211;195212;195213 155756;155757;155758;155759;155760;155761;155762 155761 7 IETIEVMEDRQSGK Unmodified 1633.7981 0.79813565 1679 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.07 3.94 6 1 7 2 3 2 1 1 1 1 1 1 1 52.961 50.133 2;3 4.654E-43 65119 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 183.99 146.87 604730000 72524000 283670000 167100000 5591600 0 0 6904300 0 11371000 7146600 10319000 0 0 7091200 33013000 23245 1679 21236 195214;195215;195216;195217;195218;195219;195220;195221;195222;195223;195224;195225;195226;195227 155763;155764;155765;155766;155767;155768;155769;155770;155771;155772;155773 155765 10 IETIEVMEDRQSGK Oxidation (M) 1649.7931 0.79305028 1679 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 39.246 34.284 3 1.1704E-14 42966 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 116.51 105.47 132070000 23995000 36707000 71365000 0 0 0 0 0 0 0 0 0 0 0 0 23246 1679 21236 195228;195229;195230;195231 155774;155775;155776;155777;155778 155776 2687 5 IETIEVMEDRQSGKK Unmodified 1761.8931 0.89309867 1679 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 yes yes 0 0 2 By matching By MS/MS 2 0 2 1 1 49.639 43.718 4 0.0099965 54855 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 46.964 34.818 26667000 20058000 0 6609700 0 0 0 0 0 0 0 0 0 0 0 0 23247 1679 21237 195232;195233 155779 155779 0 IETINFHEVK Unmodified 1228.6452 0.64518747 4963 Q9UKF6 CPSF3 Cleavage and polyadenylation specificity factor subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 5 15 1 1 3 1 1 2 1 2 2 1 1 1 1 2 53.873 52.707 2;3 8.3624E-06 67566 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 141.48 114.23 607870000 16719000 86814000 170860000 0 1716900 31624000 20961000 20437000 20133000 44231000 36110000 29863000 31123000 34315000 62962000 23248 4963 21238 195234;195235;195236;195237;195238;195239;195240;195241;195242;195243;195244;195245;195246;195247;195248;195249;195250;195251;195252;195253 155780;155781;155782;155783;155784;155785;155786;155787;155788;155789;155790;155791;155792 155790 12 IETLDPALIRPGR Unmodified 1449.8304 0.83036248 1875 P62191 PSMC1 26S protease regulatory subunit 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.487 70.559 3 9.5911E-05 80928 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 84.289 62.243 263020000 0 0 0 15235000 17894000 39393000 7110900 10045000 6961400 35363000 40436000 45398000 7722700 9772400 27689000 23249 1875 21239 195254;195255;195256;195257;195258;195259;195260;195261;195262;195263;195264;195265 155793;155794;155795;155796;155797;155798;155799;155800;155801;155802;155803;155804 155798 12 IETMLGDVAVAVHPK Unmodified 1578.844 0.84396364 1210 P26640 VARS Valine--tRNA ligase yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 78.193 78.268 3 0.0077359 90434 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 36.667 23.904 49211000 0 0 0 0 1308100 5794400 0 0 2406200 0 0 7979700 0 7149500 24573000 23250 1210 21240 195266;195267;195268;195269;195270;195271 155805;155806;155807 155805 3 IETNENNLESAK Unmodified 1360.647 0.64703797 2135 Q07065 CKAP4 Cytoskeleton-associated protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 25.817 26.018 2 3.3779E-08 27738 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 145.89 130.74 201080000 0 0 0 20912000 16316000 14311000 13844000 15671000 10099000 16205000 22558000 27235000 17393000 10472000 16061000 23251 2135 21241 195272;195273;195274;195275;195276;195277;195278;195279;195280;195281;195282;195283 155808;155809;155810;155811;155812;155813;155814;155815;155816;155817;155818;155819;155820;155821;155822;155823 155810 15 IETQDIQALR Unmodified 1185.6354 0.63535107 1154 P23368 ME2 NAD-dependent malic enzyme, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 52.068 52.131 2 0.00057411 58492 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 149.65 93.977 744230000 0 0 0 35046000 49848000 93029000 65903000 65231000 77632000 87251000 130320000 139970000 0 0 0 23252 1154 21242 195284;195285;195286;195287;195288;195289;195290;195291;195292 155824;155825;155826;155827;155828;155829;155830;155831;155832 155827 9 IETTHPPLPPAHPPPDR Unmodified 1870.969 0.96898123 555 O75909 CCNK Cyclin-K yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 45.986 46.135 4 0.031776 51891 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 24.784 22.31 66071000 0 0 0 4111000 0 6318100 6113200 9641200 0 8247900 0 0 10592000 8732400 12314000 23253 555 21243 195293;195294;195295;195296;195297;195298;195299;195300 155833 155833 1 IETVNESWNALATPSDK Unmodified 1873.9058 0.90577185 1126 P21399 ACO1 Cytoplasmic aconitate hydratase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.57 3.96 3 4 2 1 1 2 1 75.478 74.371 2 1.109E-45 85700 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 152.74 130.21 1221400000 0 1180400000 3606900 0 0 0 0 0 0 0 5989400 0 0 11532000 19921000 23254 1126 21244 195301;195302;195303;195304;195305;195306;195307 155834;155835;155836;155837;155838 155835 5 IETWHKPDLGTQENVHK Unmodified 2031.0174 0.017387984 2031 Q00169 PITPNA Phosphatidylinositol transfer protein alpha isoform yes yes 0 0 1 By MS/MS 2 0 1 1 51.943 43.981 4 0.0048604 60575 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 31.115 21.327 25934000 25934000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23255 2031 21245 195308 155839 155839 1 IEVATYATCYPDFSK Unmodified 1763.8076 0.80763771 2092 Q03169 TNFAIP2 Tumor necrosis factor alpha-induced protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 79.761 75.049 2 6.4972E-07 93507 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.56 120.88 28263000 0 28263000 0 0 0 0 0 0 0 0 0 0 0 0 0 23256 2092 21246 195309 155840 155840 1 IEVEIPK Unmodified 826.48002 0.48001963 3560 Q8WVC0 LEO1 RNA polymerase-associated protein LEO1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 56.178 56.3 2 0.023411 63728 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 91.906 39.223 565740000 0 0 0 29220000 31504000 31916000 34253000 0 26824000 64048000 1169300 90338000 83135000 75070000 98262000 23257 3560 21247 195310;195311;195312;195313;195314;195315;195316;195317;195318;195319;195320 155841;155842;155843;155844 155842 4 IEVEKPFAIAK Unmodified 1243.7176 0.71762413 1153 P23284 PPIB Peptidyl-prolyl cis-trans isomerase B yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 68.407 62.109 2;3 0.0017531 75185 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 84.817 73.717 42914000 5154000 37760000 0 0 0 0 0 0 0 0 0 0 0 0 0 23258 1153 21248 195321;195322;195323 155845;155846;155847 155846 2 IEVFCERTPK Unmodified 1277.6438 0.64380726 4366 Q9H2H8 PPIL3 Peptidyl-prolyl cis-trans isomerase-like 3 yes yes 0 0 1 By MS/MS 2 0 1 1 52.215 44.201 3 0.023859 60897 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.509 57.241 121850000 121850000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23259 4366 21249 195324 155848 155848 0 IEVGDVNPSETQYISEPK Unmodified 2003.9688 0.96876604 3157 Q86UV5 USP48 Ubiquitin carboxyl-terminal hydrolase 48 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 71.834 71.949 2 2.5734E-07 82305 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.763 55.846 36271000 0 0 0 0 2244000 4655200 2681300 3010800 1812200 4633200 0 3995300 3865000 3409500 5964200 23260 3157 21250 195325;195326;195327;195328;195329;195330;195331;195332;195333;195334 155849;155850;155851;155852;155853;155854;155855;155856;155857 155852 9 IEVIEIMTDR Unmodified 1217.6326 0.63257388 891 P09651;Q32P51 HNRNPA1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.687 80.747 2 0.0018 93368 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 101.65 56.565 374460000 0 0 0 7929700 9857200 18097000 14971000 17679000 17635000 25872000 40878000 44032000 13689000 36329000 127490000 23261 891 21251 195335;195336;195337;195338;195339;195340;195341;195342;195343;195344;195345;195346 155858;155859;155860;155861;155862;155863;155864;155865;155866;155867;155868;155869 155863 12 IEVIEIMTDRGSGK Unmodified 1546.8025 0.80249275 891 P09651;Q32P51 HNRNPA1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 yes no 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS 6.57 3.99 1 1 1 4 3 1 1 1 1 83.004 81.778 3 2.5703E-34 95457 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 130.24 103.14 633630000 595300000 0 0 0 0 0 0 0 3002500 0 0 0 0 0 35334000 23262 891 21252 195347;195348;195349;195350;195351;195352;195353 155870;155871;155872;155873;155874;155875;155876 155874 6 IEVIEIMTDRGSGK Oxidation (M) 1562.7974 0.79740737 891 P09651;Q32P51 HNRNPA1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 yes no 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS 3.29 2.76 5 1 1 2 2 2 1 60.881 55.075 2;3 0.00035397 68249 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 73.91 54.852 121140000 54584000 30432000 36122000 0 0 0 0 0 0 0 0 0 0 0 0 23263 891 21252 195354;195355;195356;195357;195358;195359;195360 155877;155878;155879;155880;155881;155882;155883 155882 1143 7 IEVIKPGDLGVDLTSK Unmodified 1682.9455 0.94545182 1394 P38117 ETFB Electron transfer flavoprotein subunit beta yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 83.37 79.361 3 0.00025364 99045 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.022 60.362 28583000 0 28583000 0 0 0 0 0 0 0 0 0 0 0 0 0 23264 1394 21253 195361;195362 155884;155885 155884 2 IEVIPMMPEVK Unmodified 1284.6822 0.68216661 2859 Q68DQ2 CRYBG3 Very large A-kinase anchor protein yes yes 0 0 0 By MS/MS 2 0 1 1 89.992 85.119 2 0.0053975 105769 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.162 43.592 8997600 0 8997600 0 0 0 0 0 0 0 0 0 0 0 0 0 23265 2859 21254 195363 155886 155886 1 IEVLDSPASK Unmodified 1057.5655 0.56554017 3348 Q8N5I9 C12orf45 Uncharacterized protein C12orf45 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 2 1 6 1 2 1 1 1 1 1 1 47.159 41.152 2 5.4125E-06 54184 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.68 79.831 72682000 3838500 68843000 0 0 0 0 0 0 0 0 0 0 0 0 0 23266 3348 21255 195364;195365;195366;195367;195368;195369;195370;195371;195372 155887;155888;155889;155890;155891;155892;155893;155894;155895;155896;155897 155891 11 IEVLEEELR Unmodified 1128.6027 0.60265396 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 67.925 67.925 2 0.00317 77871 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 128.69 86.577 1161800000 0 0 0 292420000 94586000 0 77151000 264350000 69670000 90922000 0 138730000 134020000 0 0 23267 1029 21256 195373;195374;195375;195376;195377;195378;195379;195380;195381;195382;195383 155898;155899;155900;155901;155902;155903;155904;155905;155906;155907;155908;155909;155910;155911;155912;155913;155914;155915;155916;155917;155918;155919;155920;155921;155922;155923;155924 155909 27 IEVLEEELRLARDANSENCNK Unmodified 2501.218 0.21801464 1029 P15924 DSP Desmoplakin yes yes 0 0 2 By MS/MS 2 0 1 1 82.839 74.708 4 0.034553 97811 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 22.118 8.7973 11169000 11169000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23268 1029 21257 195384 155925 155925 1 IEVLQQHENEDIYK Unmodified 1756.8632 0.86317875 163 O00505 KPNA3 Importin subunit alpha-4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.38 3.17 4 1 19 1 3 1 1 2 2 2 1 1 2 2 1 1 2 2 53.319 52.191 2;3 2.1181E-52 68391 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 190.34 173.4 670180000 23209000 278600000 17379000 21793000 17273000 33633000 22539000 22350000 13634000 46223000 35428000 26877000 27645000 28552000 55044000 23269 163 21258 195385;195386;195387;195388;195389;195390;195391;195392;195393;195394;195395;195396;195397;195398;195399;195400;195401;195402;195403;195404;195405;195406;195407;195408 155926;155927;155928;155929;155930;155931;155932;155933;155934;155935;155936;155937;155938;155939;155940;155941;155942;155943;155944;155945 155931 20 IEVLYEDEGFR Unmodified 1368.6561 0.65614609 4011 Q99460 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 73.236 73.175 2 0.030183 84347 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 67.726 55.149 63955000 0 0 0 0 15580000 0 0 0 0 0 0 48375000 0 0 0 23270 4011 21259 195409;195410 155946 155946 0 IEVLYEDEGFRSR Unmodified 1611.7893 0.78928553 4011 Q99460 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 0 1 By MS/MS 10 0 1 1 63.245 63.23 3 0.030908 72436 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.875 25.146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23271 4011 21260 195411 155947 155947 1 IEVNNATAR Unmodified 986.51451 0.51450765 309 O43251;Q9NWB1;A6NFN3 RBFOX2;RBFOX1;RBFOX3 RNA binding protein fox-1 homolog 2;RNA binding protein fox-1 homolog 1;RNA binding protein fox-1 homolog 3 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 2 2 1 1 1 1 1 1 1 1 2 2 18.823 19.003 2 0.0035031 19000 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 103.56 23.966 316560000 0 0 0 17368000 19039000 19296000 21782000 23708000 21831000 29175000 27833000 25168000 30666000 31428000 49262000 23272 309 21261 195412;195413;195414;195415;195416;195417;195418;195419;195420;195421;195422;195423;195424;195425;195426;195427 155948;155949;155950;155951;155952;155953;155954;155955;155956;155957;155958 155956 3 IEVPLYSLLEQTHLK Unmodified 1781.9927 0.99273636 3633 Q92598 HSPH1 Heat shock protein 105 kDa yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 3 1 98.053 93.381 3 3.5543E-50 116996 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 148.7 139.01 146760000 19431000 125350000 1979400 0 0 0 0 0 0 0 0 0 0 0 0 23273 3633 21262 195428;195429;195430;195431;195432 155959;155960;155961;155962;155963;155964 155960 6 IEVQDTSGGTTALRPSASTQALSSSVSSSK Unmodified 2951.4684 0.4683519 2608 Q16531 DDB1 DNA damage-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.601 63.692 3 5.4391E-138 72947 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 156.03 147.41 468500000 0 0 0 8392600 19094000 25000000 17337000 22262000 14858000 44053000 61584000 53619000 25380000 55853000 121070000 23274 2608 21263 195433;195434;195435;195436;195437;195438;195439;195440;195441;195442;195443;195444 155965;155966;155967;155968;155969;155970;155971;155972;155973;155974;155975;155976;155977;155978;155979;155980;155981 155967 17 IEVSTEEAPEEENDFFNSFTTVLHK Unmodified 2911.34 0.33996349 3631 Q92576 PHF3 PHD finger protein 3 yes yes 0 0 0 By MS/MS 2 0 1 1 96.827 88.697 3 0.00019159 114593 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.658 37.154 15767000 15767000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23275 3631 21264 195445 155982 155982 1 IEWDYECEPGMVK Unmodified 1654.7007 0.7007298 3403 Q8NBT2 SPC24 Kinetochore protein Spc24 yes yes 0 0 0 By MS/MS 2 0 1 1 78.361 73.586 2 0.0015197 91744 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.83 100.45 49211000 0 49211000 0 0 0 0 0 0 0 0 0 0 0 0 0 23276 3403 21265 195446 155983 155983 1 IEWDYECEPGMVK Oxidation (M) 1670.6956 0.69564442 3403 Q8NBT2 SPC24 Kinetochore protein Spc24 yes yes 0 1 0 By MS/MS 2 0 1 1 71.539 65.812 2 0.0045803 83379 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.573 89.19 34095000 0 34095000 0 0 0 0 0 0 0 0 0 0 0 0 0 23277 3403 21265 195447 155984 155984 4959 0 IEWLESHQDADIEDFK Unmodified 1973.9007 0.90068647 932 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 5.57 3.85 6 2 6 3 3 2 1 1 1 1 1 1 79.967 77.919 2;3 2.2875E-57 97319 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 156.5 148.96 1736900000 1192800000 419950000 47630000 0 0 4887900 0 6894100 6542500 0 4117100 0 0 5450800 48617000 23278 932 21266 195448;195449;195450;195451;195452;195453;195454;195455;195456;195457;195458;195459;195460;195461 155985;155986;155987;155988;155989;155990;155991;155992;155993;155994 155985 9 IEYEPFRK Unmodified 1080.5604 0.56039521 3041 Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.631 40.809 2 0.0065465 45550 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 130.64 96.995 300410000 0 0 0 14042000 12370000 22041000 21876000 19222000 19171000 31593000 32102000 42422000 28558000 22687000 34327000 23279 3041 21267 195462;195463;195464;195465;195466;195467;195468;195469;195470;195471;195472;195473 155995;155996;155997;155998 155995 2 IEYNDQNDGSCDVK Unmodified 1655.6733 0.67332907 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26.529 25.991 2 8.0262E-24 33183 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 131.43 121.78 113320000 7857100 12461000 0 5205000 4502700 8763900 4614000 3640800 4267200 6963500 15015000 9202700 6676000 9521300 14633000 23280 487 21268 195474;195475;195476;195477;195478;195479;195480;195481;195482;195483;195484;195485;195486;195487 155999;156000;156001;156002;156003;156004;156005;156006;156007;156008;156009;156010;156011;156012 156005 14 IEYNESMK Unmodified 1012.4535 0.45354688 3714 Q969G3 SMARCE1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 26.596 26.836 2 0.0044102 27667 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 112.17 93.847 151380000 0 0 0 0 7554200 11757000 11063000 9441900 6662300 14748000 16226000 29298000 11200000 11134000 22295000 23281 3714 21269 195488;195489;195490;195491;195492;195493;195494;195495;195496;195497;195498 156013;156014;156015;156016 156015 4 IEYVDETGRK Unmodified 1208.6037 0.60371659 312 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 25.791 24.61 3 0.012829 30350 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 78.939 59.961 220230000 6335500 74424000 3728000 0 11226000 0 14499000 13762000 15900000 15722000 14265000 0 14076000 14294000 21998000 23282 312 21270 195499;195500;195501;195502;195503;195504;195505;195506;195507;195508;195509;195510;195511 156017;156018;156019;156020;156021;156022;156023;156024;156025 156022 6 IEYVTVTPEGFR Unmodified 1409.7191 0.7190807 3038 Q7KZ85 SUPT6H Transcription elongation factor SPT6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 76.289 76.341 2 0.00027515 87263 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 83 71.972 96570000 0 0 0 4211300 5513400 0 5802300 7706300 0 9687700 12002000 10282000 6784100 14408000 20172000 23283 3038 21271 195512;195513;195514;195515;195516;195517;195518;195519;195520;195521 156026;156027;156028;156029;156030;156031;156032;156033;156034 156030 9 IFAFDLDAK Unmodified 1038.5386 0.53859714 3941 Q96P11 NSUN5 Probable 28S rRNA (cytosine-C(5))-methyltransferase yes yes 0 0 0 By MS/MS 2 0 1 1 86.844 78.713 2 0.033862 102564 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.42 51.461 9365100 9365100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23284 3941 21272 195522 156035 156035 1 IFALLAGK Unmodified 831.52182 0.52182486 1707 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 75.61 75.673 2 0.013136 87368 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 73.039 17.013 41223000 0 0 0 2365800 0 6367800 5338500 0 0 6494200 3816100 0 4048900 4115800 8676000 23285 1707 21273 195523;195524;195525;195526;195527;195528;195529;195530 156036;156037;156038;156039;156040;156041;156042 156036 7 IFANTESYLK Unmodified 1184.6077 0.60773933 2170 Q09161 NCBP1 Nuclear cap-binding protein subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.824 60.928 2 0.0021243 69407 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 86.205 51.952 67400000 0 0 0 3635500 2599800 6214000 2633600 3537500 2644100 7342000 6523900 9738800 5330700 6321700 10879000 23286 2170 21274 195531;195532;195533;195534;195535;195536;195537;195538;195539;195540;195541;195542 156043;156044;156045;156046;156047;156048;156049;156050;156051;156052 156048 9 IFANTPDSGCVLGMR Oxidation (M) 1652.7651 0.76506139 861 P08237 PFKM ATP-dependent 6-phosphofructokinase, muscle type yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 63.494 63.606 2 7.5767E-19 72546 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 105.83 83.145 227870000 0 0 0 13193000 0 23622000 21347000 20253000 18275000 34652000 34344000 0 0 30024000 32162000 23287 861 21275 195543;195544;195545;195546;195547;195548;195549;195550;195551 156053;156054;156055;156056;156057;156058;156059;156060;156061 156056 1087 9 IFANTPDSGCVLGMR Unmodified 1636.7701 0.77014677 861 P08237 PFKM ATP-dependent 6-phosphofructokinase, muscle type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.974 74.035 2 5.6071E-35 85619 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 152.07 125.55 227830000 0 0 0 8224300 11115000 25541000 5487500 12749000 12201000 15683000 24233000 30648000 15048000 26427000 40469000 23288 861 21275 195552;195553;195554;195555;195556;195557;195558;195559;195560;195561;195562;195563 156062;156063;156064;156065;156066;156067;156068;156069;156070;156071;156072 156069 11 IFANTPDSGCVLGMRK Unmodified 1764.8651 0.86510978 861 P08237 PFKM ATP-dependent 6-phosphofructokinase, muscle type yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 62.947 63.084 3 0.0043073 71307 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.091 24.752 81409000 0 0 0 0 5112100 10408000 6489300 8315600 6514100 0 13674000 0 8823700 10284000 11789000 23289 861 21276 195564;195565;195566;195567;195568;195569;195570;195571;195572 156073;156074;156075;156076;156077;156078;156079 156073 7 IFANTPDSGCVLGMRK Oxidation (M) 1780.86 0.86002441 861 P08237 PFKM ATP-dependent 6-phosphofructokinase, muscle type yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 53.516 53.876 3 0.0010004 61253 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 43.791 36.659 47103000 0 0 0 0 0 0 0 0 0 19346000 0 0 14935000 0 12822000 23290 861 21276 195573;195574;195575 156080 156080 1087 1 IFAPNHVVAK Unmodified 1094.6237 0.62366417 2078 Q02543 RPL18A 60S ribosomal protein L18a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.435 37.615 2 0.0044525 41462 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 72.789 32.686 144880000 0 0 0 7829300 6828000 6898700 7277600 11559000 6805600 12675000 13097000 22996000 16591000 13126000 19195000 23291 2078 21277 195576;195577;195578;195579;195580;195581;195582;195583;195584;195585;195586;195587 156081;156082;156083;156084;156085 156081 5 IFAQDGEGQRIDIQMK Oxidation (M) 1863.9149 0.91489675 487 O75369 FLNB Filamin-B yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 56.912 52.058 3 0.002441 67271 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 55.841 45.182 49862000 0 23168000 26694000 0 0 0 0 0 0 0 0 0 0 0 0 23292 487 21278 195588;195589 156086;156087 156086 618 2 IFAQDGEGQRIDIQMK Unmodified 1847.92 0.91998213 487 O75369 FLNB Filamin-B yes yes 0 0 1 By MS/MS 2 0 1 1 73.31 65.113 3 0.00044945 86313 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.305 31.892 6561600 6561600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23293 487 21278 195590 156088 156088 1 IFASIAPSIYGHEDIK Unmodified 1759.9145 0.91448604 1590 P49736 MCM2 DNA replication licensing factor MCM2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.5 3.88 7 2 11 4 3 2 1 1 1 1 1 1 1 1 1 1 1 79.665 77.43 2;3 9.8197E-05 97939 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.39 95.4 1419600000 934810000 321110000 44427000 0 2316000 9374200 4004300 4033400 3996900 10819000 11959000 9369100 4574200 9061600 49697000 23294 1590 21279 195591;195592;195593;195594;195595;195596;195597;195598;195599;195600;195601;195602;195603;195604;195605;195606;195607;195608;195609;195610 156089;156090;156091;156092;156093;156094;156095;156096;156097;156098;156099;156100;156101;156102;156103;156104 156091 15 IFASNLK Unmodified 791.45414 0.45413923 2354 Q13895 BYSL Bystin yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 37.218 37.347 2 0.050025 41467 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 63.148 14.387 108640000 0 0 0 7471700 8988400 8313000 8291400 7551900 5820200 15566000 12670000 0 4699300 10966000 18307000 23295 2354 21280 195611;195612;195613;195614;195615;195616;195617;195618;195619;195620;195621 156105 156105 1 IFCGDLGNEVNDDILAR Unmodified 1919.9047 0.90472599 4141 Q9BTD8 RBM42 RNA-binding protein 42 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 82.013 82.18 2 2.4674E-28 94782 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 113.99 102.01 56326000 0 0 0 0 0 0 0 5396000 0 10031000 10698000 13010000 0 0 17191000 23296 4141 21281 195622;195623;195624;195625;195626;195627 156106;156107;156108;156109;156110;156111;156112 156107 7 IFCLDGVK Unmodified 950.48954 0.48953845 1411 P40261 NNMT Nicotinamide N-methyltransferase yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 3 9 1 1 1 1 1 1 1 1 1 1 1 1 66.603 65.147 2 0.015495 73422 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 68.787 17.75 338940000 28402000 200350000 30733000 3905900 5418900 10222000 6128300 5931200 4646400 12593000 0 0 0 11800000 18814000 23297 1411 21282 195628;195629;195630;195631;195632;195633;195634;195635;195636;195637;195638;195639 156113;156114;156115;156116;156117;156118 156117 5 IFDDSPCPFTAK Unmodified 1396.6333 0.63330216 3237 Q8IWA5 SLC44A2 Choline transporter-like protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 71.959 66.232 2 0.0014364 84044 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.298 55.364 13927000 0 13927000 0 0 0 0 0 0 0 0 0 0 0 0 0 23298 3237 21283 195640 156119 156119 1 IFDDVSSGVSQLASK Unmodified 1551.7781 0.77805214 3362 Q8N6T3 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.4 2.04 1 1 23 2 2 2 2 2 1 2 2 2 2 2 2 2 74.72 74.443 2;3 3.5979E-38 91084 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 169.89 101.67 1157000000 0 263590000 0 40013000 53137000 51289000 66051000 66939000 60360000 84435000 104220000 88710000 90159000 66837000 121240000 23299 3362 21284 195641;195642;195643;195644;195645;195646;195647;195648;195649;195650;195651;195652;195653;195654;195655;195656;195657;195658;195659;195660;195661;195662;195663;195664;195665 156120;156121;156122;156123;156124;156125;156126;156127;156128;156129;156130;156131;156132;156133;156134;156135;156136;156137;156138;156139;156140;156141 156124 18 IFDEILVNAADNK Unmodified 1460.7511 0.75110911 946;2084 P11388;Q02880 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2-beta no no 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 83.405 79.789 2 0.0027739 96714 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 89.548 72.317 44363000 0 38524000 5838900 0 0 0 0 0 0 0 0 0 0 0 0 23300 946;2084 21285 195666;195667;195668 156142;156143;156144 156144 3 IFDENELELLMCGLGDVDVNDWREHTK Unmodified 3246.4962 0.49616333 1515 P46934 NEDD4 E3 ubiquitin-protein ligase NEDD4 yes yes 0 0 1 By MS/MS 2 0 1 1 100.15 92.018 4 8.6308E-15 118559 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.274 71.419 11474000 11474000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23301 1515 21286 195669 156145 156145 1 IFDIDEAEEGVK Unmodified 1363.6507 0.65072636 1099 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.16 3.73 5 2 12 2 3 2 1 1 1 1 1 1 1 1 1 1 1 1 73.137 71.529 2 1.0864E-09 87061 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 123.63 97.111 2233300000 280590000 1545500000 32955000 20030000 20082000 32699000 27466000 19457000 21843000 24694000 39518000 43363000 25166000 37687000 62174000 23302 1099 21287 195670;195671;195672;195673;195674;195675;195676;195677;195678;195679;195680;195681;195682;195683;195684;195685;195686;195687;195688 156146;156147;156148;156149;156150;156151;156152;156153;156154;156155;156156;156157;156158;156159;156160;156161;156162;156163;156164;156165;156166;156167;156168;156169;156170 156164 24 IFDLLPNK Unmodified 958.54877 0.54876789 2823 Q5VW36 FOCAD Focadhesin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching 8.36 3.15 2 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 78.628 77.958 2 0.009506 89833 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 82.671 65.378 196510000 0 32806000 16438000 0 13599000 18464000 12603000 15801000 9990700 20015000 11917000 14289000 7445400 9260500 13879000 23303 2823 21288 195689;195690;195691;195692;195693;195694;195695;195696;195697;195698;195699;195700;195701;195702 156171;156172;156173;156174;156175;156176;156177 156174 7 IFDPQNPDENE Unmodified 1316.5521 0.55207495 1500 P46109 CRKL Crk-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.1 2.7 1 9 1 1 1 1 1 1 1 1 1 1 55.071 55.743 2 0.018687 55365 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 58.23 49.698 104590000 20368000 0 0 4726700 3342300 0 5898300 4375500 0 0 22880000 0 7772500 13780000 21444000 23304 1500 21289 195703;195704;195705;195706;195707;195708;195709;195710;195711;195712 156178;156179;156180;156181;156182;156183 156180 6 IFDSEEILAGYK Unmodified 1383.6922 0.69219725 366 O43776 NARS Asparagine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 80.325 80.504 2 2.6275E-05 92901 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.692 69.917 131730000 0 0 0 0 0 0 0 0 0 0 31047000 0 0 21143000 79538000 23305 366 21290 195713;195714;195715 156184;156185;156186 156184 3 IFDSEEILAGYKR Unmodified 1539.7933 0.79330827 366 O43776 NARS Asparagine--tRNA ligase, cytoplasmic yes yes 0 0 1 By matching By MS/MS By MS/MS 10 0 3 1 1 1 75.024 75.23 3 0.0013006 86242 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.998 32.527 15290000 0 0 0 0 0 0 0 0 1725900 0 0 0 0 2263800 11301000 23306 366 21291 195716;195717;195718 156187 156187 1 IFDSPEELPK Unmodified 1173.5918 0.59175492 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 62.71 62.82 2 0.0029937 71634 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 78.113 46.809 217330000 0 0 0 0 21645000 0 0 32886000 18238000 0 0 63368000 40534000 40659000 0 23307 1364 21292 195719;195720;195721;195722;195723;195724;195725;195726 156188;156189;156190;156191;156192;156193;156194;156195;156196;156197 156194 10 IFEDIPTLEDLAETLK Unmodified 1845.9612 0.96116146 2627 Q16666 IFI16 Gamma-interferon-inducible protein 16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.29 0.452 5 2 3 3 1 100.19 95.18 2;3 1.313E-40 119018 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 113.59 102.54 87599000 43790000 42944000 865380 0 0 0 0 0 0 0 0 0 0 0 0 23308 2627 21293 195727;195728;195729;195730;195731;195732;195733 156198;156199;156200;156201;156202;156203;156204;156205 156203 8 IFEDPTDSDLHK Unmodified 1415.6569 0.65687437 4938 Q9UJF2 RASAL2 Ras GTPase-activating protein nGAP yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 43.694 43.428 3 0.00037019 55155 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.29 51.258 189980000 0 48623000 0 8066600 6015000 12639000 6949600 10204000 12447000 13866000 11686000 11413000 12648000 10534000 24894000 23309 4938 21294 195734;195735;195736;195737;195738;195739;195740;195741;195742;195743;195744;195745;195746 156206;156207;156208;156209;156210;156211 156208 5 IFEEDFQRER Unmodified 1367.647 0.64697839 2479 Q15025 TNIP1 TNFAIP3-interacting protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 46.034 46.15 3 0.0040356 51908 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 56.404 38.268 57987000 0 0 0 3192100 3986900 4215100 6599000 1290600 4110900 6890600 6137900 0 7264800 4605700 9693900 23310 2479 21295 195747;195748;195749;195750;195751;195752;195753;195754;195755;195756;195757 156212;156213 156213 2 IFEEHGDLTK Unmodified 1187.5823 0.58225287 3236 Q8IW75 SERPINA12 Serpin A12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 2 1 2 1 2 2 1 1 1 1 1 1 32.978 33.109 2;3 0.00064271 36879 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 136.57 87.208 238290000 0 0 0 58951000 9637200 13808000 4042400 74023000 10526000 11538000 11962000 17284000 7556700 7044800 11916000 23311 3236 21296 195758;195759;195760;195761;195762;195763;195764;195765;195766;195767;195768;195769;195770;195771;195772;195773 156214;156215;156216 156216 1 IFEEQGQTQEK Unmodified 1335.6307 0.63065962 157 O00459 PIK3R2 Phosphatidylinositol 3-kinase regulatory subunit beta yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 23.247 22.827 2 1.9734E-28 28605 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 224.86 201.43 84903000 0 43035000 0 1722900 1818900 3010600 1791800 2010100 1582000 4887100 3599700 6620400 4519600 3538900 6766800 23312 157 21297 195774;195775;195776;195777;195778;195779;195780;195781;195782;195783;195784;195785;195786;195787 156217;156218;156219;156220;156221;156222;156223 156220 7 IFEGLGPK Unmodified 859.48035 0.48035398 488 O75376 NCOR1 Nuclear receptor corepressor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 59.677 53.703 2 0.013744 72904 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.068 22.236 153190000 48227000 68973000 35988000 0 0 0 0 0 0 0 0 0 0 0 0 23313 488 21298 195788;195789;195790 156224;156225 156225 2 IFEGMPVTFTCR Unmodified 1456.6843 0.68429187 3581 Q8WX93 PALLD Palladin yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 81.756 81.893 2 0.005125 94444 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.359 35.489 15403000 0 0 0 0 0 1831200 0 4355800 0 0 0 0 0 0 9215600 23314 3581 21299 195791;195792;195793 156226 156226 1 IFEGTNDILR Unmodified 1176.6139 0.61388734 1591 P49748 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 66.781 67.194 2 0.024114 76356 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.783 58.224 35933000 0 0 0 0 0 0 0 0 0 0 17537000 0 0 0 18396000 23315 1591 21300 195794;195795 156227;156228 156227 0 IFELGLK Unmodified 818.49019 0.49019038 2222 Q12996 CSTF3 Cleavage stimulation factor subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 72.879 73.085 2 0.029815 84504 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 75.311 3.3614 54399000 0 0 0 0 0 0 0 5541900 0 8088500 7601100 5675100 6210100 7587000 13695000 23316 2222 21301 195796;195797;195798;195799;195800;195801;195802 156229;156230 156230 2 IFEPILGEGR Unmodified 1129.6132 0.61315906 1234 P28340 POLD1 DNA polymerase delta catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 74.218 74.464 2 0.026694 85184 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.203 22.675 94519000 0 0 0 0 0 0 0 0 0 0 0 32790000 0 26411000 35319000 23317 1234 21302 195803;195804;195805 156231 156231 1 IFEPPPPK Unmodified 923.51165 0.5116541 295 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 41.41 41.165 2 0.0079077 45628 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 88.029 22.766 239900000 0 11510000 0 11372000 8529500 18880000 12244000 12792000 13591000 18970000 21992000 26112000 20605000 23706000 39598000 23318 295 21303 195806;195807;195808;195809;195810;195811;195812;195813;195814;195815;195816;195817;195818 156232;156233;156234;156235;156236;156237;156238;156239;156240;156241;156242;156243 156233 11 IFEVNASSQR Unmodified 1149.5778 0.57783619 3958 Q96QE3 ATAD5 ATPase family AAA domain-containing protein 5 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 40.658 40.481 2 0.030627 45543 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 51.276 29.19 6724900 0 0 0 0 3902900 0 0 0 2822000 0 0 0 0 0 0 23319 3958 21304 195819;195820 156244 156244 1 IFEYEHGETLGSK Unmodified 1508.7147 0.7147236 5370 yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 26.142 22.315 3 0.016212 29577 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 27.672 17.621 + 52613000 0 39350000 13264000 0 0 0 0 0 0 0 0 0 0 0 0 23320 5370 21305 195821;195822;195823 156245 156245 1 IFFAGDTIPK Unmodified 1107.5964 0.59644637 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 76.73 75.598 2 0.0025236 86420 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 82.75 56.148 1595400000 432620000 551680000 287210000 16210000 8846900 25354000 15754000 16488000 11180000 28135000 34588000 30237000 18228000 33967000 84872000 23321 487 21306 195824;195825;195826;195827;195828;195829;195830;195831;195832;195833;195834;195835;195836;195837;195838;195839 156246;156247;156248;156249;156250;156251;156252;156253;156254;156255;156256;156257;156258;156259;156260;156261;156262;156263 156259 18 IFFPGSHPVR Unmodified 1155.6189 0.61891314 4431 Q9H7B4 SMYD3 Histone-lysine N-methyltransferase SMYD3 yes yes 0 0 0 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 52.27 52.668 3 0.010588 58609 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.54 27.333 20694000 0 0 0 0 0 3160700 0 0 0 2487900 0 5231000 0 0 9814000 23322 4431 21307 195840;195841;195842;195843 156264 156264 1 IFGDHPIPQYEVNPR Unmodified 1780.8897 0.88966827 3782 Q96CS2 HAUS1 HAUS augmin-like complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.823 66.905 3 6.3828E-10 75999 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.478 77.079 83565000 0 0 0 2805000 3378000 6316300 3389400 8521500 4731500 5885100 7747800 9437500 5970200 7496000 17886000 23323 3782 21308 195844;195845;195846;195847;195848;195849;195850;195851;195852;195853;195854;195855 156265;156266;156267;156268;156269;156270;156271;156272;156273 156267 7 IFGGEIK Unmodified 762.42759 0.42759012 838 P07237 P4HB Protein disulfide-isomerase yes yes 0 0 0 By MS/MS 2 0 1 1 51.586 47.665 2 0.038141 59744 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 82.263 12.83 10154000 0 0 10154000 0 0 0 0 0 0 0 0 0 0 0 0 23324 838 21309 195856 156274 156274 1 IFGGLDMLAEK Oxidation (M) 1208.6111 0.61111015 3651 Q92688 ANP32B Acidic leucine-rich nuclear phosphoprotein 32 family member B yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 75.898 75.96 2 0.00022318 87147 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.665 76.145 681590000 0 0 0 25121000 33452000 57121000 37306000 42570000 39650000 55799000 83571000 84925000 74569000 50263000 97247000 23325 3651 21310 195857;195858;195859;195860;195861;195862;195863;195864;195865;195866;195867;195868;195869 156275;156276;156277;156278;156279;156280;156281;156282;156283;156284;156285;156286;156287 156278 5165 13 IFGGLDMLAEK Unmodified 1192.6162 0.61619553 3651 Q92688 ANP32B Acidic leucine-rich nuclear phosphoprotein 32 family member B yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 83.57 83.633 2 0.0019204 96837 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 70.1 60.512 400680000 0 0 0 4530700 9159300 18342000 13756000 38439000 23299000 26465000 43231000 41401000 24106000 34538000 123410000 23326 3651 21310 195870;195871;195872;195873;195874;195875;195876;195877;195878;195879;195880;195881 156288;156289;156290;156291;156292;156293;156294;156295;156296;156297 156288 9 IFGLGPSK Unmodified 817.46979 0.46978929 3709 Q93074 MED12 Mediator of RNA polymerase II transcription subunit 12 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 60.77 61.062 2 0.027935 68788 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.047 9.3044 8059600 0 0 0 0 0 3059600 0 0 0 0 0 0 0 0 5000000 23327 3709 21311 195882;195883 156298 156298 1 IFGPIWNR Unmodified 1001.5447 0.54468557 947 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.699 76.75 2 0.011473 87964 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.847 49.884 51646000 0 0 0 1592400 1085800 5260300 0 2557900 1452500 3455500 4907700 4166000 1742700 3544100 21881000 23328 947 21312 195884;195885;195886;195887;195888;195889;195890;195891;195892;195893;195894 156299;156300;156301;156302;156303;156304 156300 6 IFGVTTLDIVR Unmodified 1232.7129 0.71287311 1423 P40926 MDH2 Malate dehydrogenase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 86.978 87.109 2 0.0068298 101221 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.567 13.458 9954800 0 0 0 0 0 0 0 0 0 0 0 1430600 0 983480 7540800 23329 1423 21313 195895;195896;195897 156305;156306 156306 2 IFHAPNASAPSSSLSTFK Unmodified 1860.937 0.9370124 4371 Q9H2P0 ADNP Activity-dependent neuroprotector homeobox protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 65.584 65.051 3 7.4297E-12 73687 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.606 61.233 260800000 52347000 0 0 0 10669000 15736000 14894000 15822000 16722000 17933000 21847000 28956000 17125000 17279000 31469000 23330 4371 21314 195898;195899;195900;195901;195902;195903;195904;195905;195906;195907;195908;195909;195910 156307;156308;156309;156310;156311;156312;156313;156314;156315;156316;156317;156318;156319;156320;156321;156322;156323;156324 156313 18 IFHELTQTDK Unmodified 1230.6245 0.62445203 953 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 1 2 2 2 2 2 2 2 2 2 2 2 33.828 34.037 2;3 7.6028E-07 37512 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 133.81 101.48 540750000 0 0 0 23701000 25705000 37731000 34335000 47329000 27344000 52197000 67202000 56309000 40388000 49647000 78863000 23331 953 21315 195911;195912;195913;195914;195915;195916;195917;195918;195919;195920;195921;195922;195923;195924;195925;195926;195927;195928;195929;195930;195931;195932;195933 156325;156326;156327;156328;156329;156330;156331;156332;156333;156334;156335;156336;156337;156338;156339;156340;156341;156342 156336 15 IFHTVTTTDDPVIRK Unmodified 1741.9363 0.93628412 278 O15371 EIF3D Eukaryotic translation initiation factor 3 subunit D yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 47.818 48.035 4 0.044463 53466 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 17.252 12.635 43308000 0 0 0 3087700 0 2580500 0 4100600 3223800 7637600 0 8275600 5980600 0 8421500 23332 278 21316 195934;195935;195936;195937;195938;195939;195940;195941 156343 156343 1 IFIFDARPSVNAVANK Unmodified 1760.9574 0.95735391 2327 Q13614 MTMR2 Myotubularin-related protein 2 yes yes 0 0 1 By MS/MS 10 0 1 1 78.641 78.887 3 0.009703 90720 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 34.498 25.932 20148000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20148000 23333 2327 21317 195942 156344 156344 1 IFIGTFK Unmodified 824.47963 0.47962569 1005 P63162;P14678 SNRPN;SNRPB Small nuclear ribonucleoprotein-associated protein N;Small nuclear ribonucleoprotein-associated proteins B and B' yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 2 1 1 1 67.824 67.932 2 0.0174 77979 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 114.02 39.191 889270000 0 0 0 53074000 47704000 67176000 61099000 73681000 48855000 78478000 76247000 95998000 87707000 83486000 115770000 23334 1005 21318 195943;195944;195945;195946;195947;195948;195949;195950;195951;195952;195953;195954;195955 156345;156346;156347;156348;156349;156350;156351;156352;156353;156354;156355;156356 156352 12 IFINLPR Unmodified 871.52797 0.52797287 324 O43396 TXNL1 Thioredoxin-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 75.778 75.9 2 0.023983 87858 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 94.669 36.008 16764000 0 0 0 0 0 5747000 5516800 0 0 0 5500300 0 0 0 0 23335 324 21319 195956;195957;195958 156357 156357 1 IFINNEWHESK Unmodified 1415.6834 0.68336389 1527 P47895 ALDH1A3 Aldehyde dehydrogenase family 1 member A3 yes yes 0 0 0 By MS/MS 2 0 1 1 63.809 55.53 3 0.0016261 74805 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.663 60.943 33530000 33530000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23336 1527 21320 195959 156358;156359 156358 2 IFISNTFNPAK Unmodified 1250.6659 0.66592292 3856 Q96GM5 SMARCD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 71.613 71.668 2 0.00041376 82736 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 86.136 56.974 95638000 0 0 0 4931800 6398900 9626200 6987300 6412700 5010600 11758000 0 10663000 9306400 8351500 16191000 23337 3856 21321 195960;195961;195962;195963;195964;195965;195966;195967;195968;195969;195970 156360;156361;156362;156363;156364;156365;156366;156367;156368;156369;156370 156367 11 IFLDESAPDNVLEVTAR Unmodified 1887.9578 0.95780742 5004 Q9ULT8 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 0 0 0 By MS/MS 10 0 1 1 85.993 86.162 2 0.0020945 99529 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.712 24.107 7695900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7695900 23338 5004 21322 195971 156371 156371 1 IFLQDIK Unmodified 875.51165 0.5116541 766 P02794 FTH1 Ferritin heavy chain;Ferritin heavy chain, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 64.964 65.048 2 0.026498 75348 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 78.616 22.59 314500000 0 0 0 11254000 12399000 15881000 14707000 14856000 12319000 0 46931000 46500000 21923000 37638000 80091000 23339 766 21323 195972;195973;195974;195975;195976;195977;195978;195979;195980;195981;195982 156372;156373;156374;156375;156376;156377 156376 5 IFLQVTSR Unmodified 962.55492 0.5549159 2583 Q15814 TBCC Tubulin-specific chaperone C yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 59.372 59.6 2 0.017693 68015 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 65.252 31.249 34787000 0 0 0 0 0 4915100 2830700 0 2580000 4042500 3852000 0 3075300 3796600 9694900 23340 2583 21324 195983;195984;195985;195986;195987;195988;195989;195990 156378;156379;156380;156381 156378 4 IFNDNSLSMEAFQHR Oxidation (M) 1823.8261 0.82608174 1449 P42226 STAT6 Signal transducer and activator of transcription 6 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By matching 10 0 5 1 1 1 1 1 64.397 64.557 3 0.00029107 73898 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 65.805 55.018 49036000 0 0 0 0 0 12374000 0 0 4580500 14859000 8551100 0 0 8671200 0 23341 1449 21325 195991;195992;195993;195994;195995 156382 156382 2283 0 IFNETPINPR Unmodified 1199.6299 0.62987176 4839 Q9UBF2 COPG2 Coatomer subunit gamma-2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.255 55.387 2 0.0027812 61889 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 80.165 43.77 66013000 0 0 0 3304300 2617800 6231800 4168800 3040800 3013900 7497300 7039100 7883000 5375500 5054600 10786000 23342 4839 21326 195996;195997;195998;195999;196000;196001;196002;196003;196004;196005;196006;196007 156383;156384;156385;156386;156387;156388;156389;156390 156388 8 IFNLSGGEK Unmodified 963.50255 0.50254598 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 49.729 48.425 2 0.0012408 63229 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 137.9 56.607 1161800000 347300000 342290000 110560000 20074000 17822000 38759000 23832000 23726000 19649000 34180000 36493000 30372000 32730000 33734000 50255000 23343 4634 21327 196008;196009;196010;196011;196012;196013;196014;196015;196016;196017;196018;196019;196020;196021;196022;196023 156391;156392;156393;156394;156395;156396;156397;156398;156399;156400;156401;156402;156403;156404;156405;156406;156407 156395 11 IFNSDELIHFR Unmodified 1389.7041 0.70409934 4641 Q9NU22 MDN1 Midasin yes yes 0 0 0 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 77.929 78.085 3 0.01148 89850 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.68 40.654 14002000 0 0 0 0 0 2755800 0 1781200 1468300 0 0 0 0 0 7996800 23344 4641 21328 196024;196025;196026;196027 156408 156408 1 IFNVAIPR Unmodified 928.54944 0.54943659 4958 Q9UK99 FBXO3 F-box only protein 3 yes yes 0 0 0 By MS/MS 10 0 1 1 74.144 74.289 2 0.016585 84885 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 67.035 18.861 2909500 0 0 0 0 0 0 0 0 0 0 0 0 0 2909500 0 23345 4958 21329 196028 156409 156409 1 IFNVMGFPADKDWEDIK Unmodified 2023.9713 0.97134899 1566 P49336 CDK8 Cyclin-dependent kinase 8 yes yes 0 0 1 By MS/MS 10 0 1 1 57.098 57.321 3 0.039848 65388 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 16.123 0 8816700 0 0 0 0 0 0 0 0 0 0 0 0 8816700 0 0 23346 1566 21330 196029 156410 156410 1 IFPGLSPVR Unmodified 984.57565 0.57565135 2833 Q5VZK9 LRRC16A Leucine-rich repeat-containing protein 16A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.687 71.758 2 0.024533 82483 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 50.607 29.736 58358000 0 0 0 2771100 2894000 6937000 3139700 3301000 3497600 6194300 4841800 7375200 3242900 3361900 10801000 23347 2833 21331 196030;196031;196032;196033;196034;196035;196036;196037;196038;196039;196040;196041 156411 156411 1 IFPPETSASVAATPPPSTASAPAAVNSSASADK Unmodified 3096.5251 0.5251385 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 2 2 2 2 1 2 2 2 2 2 1 74.235 74.306 3;4 3.4746E-25 84972 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 51.975 47.101 309750000 0 0 0 8579700 15222000 24964000 24087000 23668000 8628500 38297000 36060000 34921000 22136000 31019000 42166000 23348 894 21332 196042;196043;196044;196045;196046;196047;196048;196049;196050;196051;196052;196053;196054;196055;196056;196057;196058;196059;196060;196061;196062 156412;156413;156414;156415;156416;156417;156418;156419;156420;156421;156422;156423;156424;156425;156426;156427;156428;156429;156430 156425 19 IFPVPEEPPVK Unmodified 1250.6911 0.69107503 712 O96006 ZBED1 Zinc finger BED domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 74.609 74.074 2 0.00064287 85319 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 78.516 65.479 1482200000 0 1114400000 0 25583000 26273000 30972000 23681000 25351000 21762000 30446000 35445000 35386000 36630000 28795000 47431000 23349 712 21333 196063;196064;196065;196066;196067;196068;196069;196070;196071;196072;196073;196074;196075;196076 156431;156432;156433;156434;156435;156436;156437;156438;156439;156440;156441;156442;156443;156444;156445 156433 12 IFQAALYAAPYK Unmodified 1354.7285 0.72852317 4764 Q9NZD2 GLTP Glycolipid transfer protein yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching 8.67 2.98 1 5 1 1 1 1 1 1 76.344 76.255 2 0.0013804 88443 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 87.639 67.649 14885000 0 0 0 3370600 1354100 2603700 0 0 0 3043900 0 0 0 0 4512800 23350 4764 21334 196077;196078;196079;196080;196081;196082 156446;156447 156447 2 IFQAENAK Unmodified 919.47633 0.47633123 3284 Q8IYI6 EXOC8 Exocyst complex component 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 2 1 1 1 1 1 1 1 20.471 20.658 2 0.0069006 21044 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 91.626 9.3637 215060000 0 0 0 15959000 0 21937000 39113000 15460000 9799800 16269000 27399000 25678000 19898000 23547000 0 23351 3284 21335 196083;196084;196085;196086;196087;196088;196089;196090;196091;196092;196093 156448;156449;156450;156451;156452;156453;156454 156451 7 IFQEPTEPK Unmodified 1087.555 0.55497548 1301 P31350 RRM2 Ribonucleoside-diphosphate reductase subunit M2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 38.075 38.336 2 0.0032531 42342 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 90.657 47.533 335540000 0 0 0 24803000 0 0 23506000 17847000 20469000 38049000 40956000 39048000 26862000 37767000 66235000 23352 1301 21336 196094;196095;196096;196097;196098;196099;196100;196101;196102;196103;196104 156455;156456;156457;156458;156459;156460;156461;156462;156463;156464;156465 156460 11 IFQEQVEK Unmodified 1019.5288 0.52876073 1173 P24468;P10589 NR2F2;NR2F1 COUP transcription factor 2;COUP transcription factor 1 yes no 0 0 0 By MS/MS 10 0 1 1 52.982 53.636 2 0.038354 60255 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 51.059 0.35595 14657000 0 0 0 0 0 0 0 0 0 0 0 14657000 0 0 0 23353 1173 21337 196105 156466 156466 1 IFQFQNFTNTR Unmodified 1414.6993 0.69934831 2654 Q2NL82 TSR1 Pre-rRNA-processing protein TSR1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 78.025 78.177 2 0.00030791 89913 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.692 71.952 39309000 0 0 0 0 0 6710500 3950600 0 3519800 0 3882100 8390700 5228800 0 7626800 23354 2654 21338 196106;196107;196108;196109;196110;196111;196112 156467;156468;156469;156470;156471;156472 156469 6 IFQFQNFTNTRK Unmodified 1542.7943 0.79431133 2654 Q2NL82 TSR1 Pre-rRNA-processing protein TSR1 homolog yes yes 0 0 1 By MS/MS 10 0 1 1 69.266 69.235 3 0.0051197 79568 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 42.789 30.812 8872800 0 0 0 0 0 8872800 0 0 0 0 0 0 0 0 0 23355 2654 21339 196113 156473 156473 1 IFQGNVHNFEK Unmodified 1331.6622 0.66223452 3798 Q96DI7 SNRNP40 U5 small nuclear ribonucleoprotein 40 kDa protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 2 14 1 1 1 1 1 1 1 1 1 2 1 1 1 2 42.297 41.659 2;3 0.0010566 45261 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.378 37.292 571580000 319930000 31518000 0 5409500 9109000 12101000 12093000 12781000 8727100 16712000 20574000 26957000 21915000 27097000 46658000 23356 3798 21340 196114;196115;196116;196117;196118;196119;196120;196121;196122;196123;196124;196125;196126;196127;196128;196129 156474;156475;156476;156477;156478;156479;156480;156481;156482 156478 9 IFQIHTSR Unmodified 1000.5454 0.54541385 1875 P62191 PSMC1 26S protease regulatory subunit 4 yes yes 0 0 0 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 36.099 36.209 2 0.016501 39064 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 67.169 35.234 12890000 0 0 0 0 1011500 1958300 0 0 0 3148000 0 6772100 0 0 0 23357 1875 21341 196130;196131;196132;196133 156483 156483 1 IFQILYANEGESK Unmodified 1510.7668 0.76675917 455 O75116 ROCK2 Rho-associated protein kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 77.143 77.294 2 1.2349E-12 88690 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 125.74 88.549 86915000 0 0 0 0 0 10799000 4474500 5311800 5580100 10200000 11508000 9864500 5624300 8034700 15518000 23358 455 21342 196134;196135;196136;196137;196138;196139;196140;196141;196142;196143;196144 156484;156485;156486;156487;156488;156489;156490;156491;156492;156493;156494;156495 156487 12 IFQNAPTDPTQDFSTQVAK Unmodified 2107.0222 0.02219859 1488 P45974 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.43 3.14 5 1 24 1 3 2 2 2 2 2 2 2 2 2 2 2 2 2 73.119 72.256 2;3 1.7122E-48 82830 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 137.62 131.15 4151600000 29616000 3518100000 14559000 23648000 20948000 66981000 40907000 20398000 23169000 61724000 63836000 57879000 34643000 61859000 113320000 23359 1488 21343 196145;196146;196147;196148;196149;196150;196151;196152;196153;196154;196155;196156;196157;196158;196159;196160;196161;196162;196163;196164;196165;196166;196167;196168;196169;196170;196171;196172;196173;196174 156496;156497;156498;156499;156500;156501;156502;156503;156504;156505;156506;156507;156508;156509;156510;156511;156512;156513;156514;156515;156516;156517;156518;156519 156513 22 IFQPTPPGAR Unmodified 1082.5873 0.58727866 384 O60231 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.149 46.317 2 0.00089427 52054 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 117.04 63.87 144400000 0 0 0 10912000 10054000 10693000 11030000 13860000 6090500 10330000 19836000 14344000 10751000 9703000 16799000 23360 384 21344 196175;196176;196177;196178;196179;196180;196181;196182;196183;196184;196185;196186 156520;156521;156522;156523;156524;156525;156526;156527;156528;156529;156530;156531;156532;156533;156534 156522 15 IFQPVIEAPGASK Unmodified 1355.7449 0.74490152 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.64 2.9 1 1 9 1 1 1 1 1 1 1 1 1 1 1 71.481 70.908 2 0.0021268 85515 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 85.377 72.587 358400000 0 8002800 3159300 23798000 0 0 34613000 0 29858000 43367000 0 63929000 47400000 43838000 60430000 23361 4139 21345 196187;196188;196189;196190;196191;196192;196193;196194;196195;196196;196197 156535;156536;156537;156538;156539;156540;156541;156542;156543;156544;156545;156546 156540 10 IFQTLNGAVDEVVLK Unmodified 1644.9087 0.90867238 159 O00469 PLOD2 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 yes yes 0 0 0 By MS/MS 2 0 1 1 90.841 85.945 3 0.00067537 106790 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.038 57.506 30459000 0 30459000 0 0 0 0 0 0 0 0 0 0 0 0 0 23362 159 21346 196198 156547 156547 1 IFQYTNFEK Unmodified 1188.5815 0.58152458 1718 P53609 PGGT1B Geranylgeranyl transferase type-1 subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 69.904 63.961 2 0.0071818 81365 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.37 62.403 176430000 107930000 46887000 21612000 0 0 0 0 0 0 0 0 0 0 0 0 23363 1718 21347 196199;196200;196201 156548;156549;156550 156548 2 IFRDGEEAGAYDGPR Unmodified 1651.759 0.75904803 1270 P30101 PDIA3 Protein disulfide-isomerase A3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.997 40.175 3 2.5768E-07 43525 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.428 74.369 891940000 0 0 0 30146000 18944000 39344000 25203000 35423000 29807000 39941000 122810000 128290000 55803000 91182000 275040000 23364 1270 21348 196202;196203;196204;196205;196206;196207;196208;196209;196210;196211;196212;196213 156551;156552;156553;156554;156555;156556;156557;156558;156559;156560;156561 156554 11 IFREDYSITTK Unmodified 1371.7034 0.70343063 4168 Q9BUQ8 DDX23 Probable ATP-dependent RNA helicase DDX23 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.585 47.748 3 0.0044462 53606 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 56.122 37.392 324150000 0 0 0 19623000 12861000 29148000 21038000 20862000 20861000 33011000 28073000 47721000 23434000 28255000 39262000 23365 4168 21349 196214;196215;196216;196217;196218;196219;196220;196221;196222;196223;196224;196225 156562;156563;156564;156565;156566;156567;156568 156563 6 IFREEQNGEDEDGGWR Unmodified 1935.8347 0.83473217 2994 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 41.001 41.749 3 0.004777 45520 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 24.668 20.7 21690000 0 0 0 0 0 0 0 0 0 0 0 12433000 0 0 9257600 23366 2994 21350 196226;196227 156569 156569 1 IFRQMDTNNDGK Unmodified 1437.6671 0.6670619 1388 P37235;P84074 HPCAL1;HPCA Hippocalcin-like protein 1;Neuron-specific calcium-binding protein hippocalcin yes no 0 0 1 By MS/MS 2 0 1 1 29.326 23.705 3 0.0086131 33734 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.414 46.362 28124000 28124000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23367 1388 21351 196228 156570 156570 0 IFSAPSMLER Unmodified 1149.5852 0.58522975 4642 Q9NUA8 ZBTB40 Zinc finger and BTB domain-containing protein 40 yes yes 0 0 0 By MS/MS 10 0 1 1 72.096 72.204 2 0.031822 83433 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 68.224 39.075 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23368 4642 21352 196229 156571 156571 1 IFSAVQQFYQPK Unmodified 1454.7558 0.75580056 4669 Q9NVI1 FANCI Fanconi anemia group I protein yes yes 0 0 0 By matching By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 77.016 77.069 2 2.9475E-09 88578 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 175.51 131.74 93875000 0 0 0 3373800 6028400 11038000 0 8798700 7088400 9491900 5772100 13475000 5142700 7315600 16350000 23369 4669 21353 196230;196231;196232;196233;196234;196235;196236;196237;196238;196239;196240 156572;156573;156574;156575;156576;156577 156574 2 IFSEENSDEIIK Unmodified 1422.6878 0.68784015 4946 Q9UJX5 ANAPC4 Anaphase-promoting complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 63.993 58.652 2 1.4588E-09 75307 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 151.83 119.3 146180000 0 146180000 0 0 0 0 0 0 0 0 0 0 0 0 0 23370 4946 21354 196241;196242;196243 156578;156579 156578 2 IFSESHK Unmodified 846.42357 0.42356738 4672 Q9NVM9 ASUN Protein asunder homolog yes yes 0 0 0 By MS/MS By matching By MS/MS 2 0 3 1 1 1 11.515 8.3574 2 0.013291 13189 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 122.79 71.824 204340000 127330000 23497000 53514000 0 0 0 0 0 0 0 0 0 0 0 0 23371 4672 21355 196244;196245;196246 156580;156581 156580 2 IFSGGEDLDQEEK Unmodified 1465.6573 0.6572683 390 O60268 KIAA0513 Uncharacterized protein KIAA0513 yes yes 0 0 0 By MS/MS 2 0 1 1 49.255 43.607 2 0.00044745 56760 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.313 54.757 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23372 390 21356 196247 156582 156582 1 IFSGPLK Unmodified 760.44833 0.44832557 4086 Q9BQ52 ELAC2 Zinc phosphodiesterase ELAC protein 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 54.064 47.114 2 0.03056 64487 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 92.692 23.303 274490000 173400000 101090000 0 0 0 0 0 0 0 0 0 0 0 0 0 23373 4086 21357 196248;196249 156583;156584 156584 2 IFSGSSHQDLSQK Unmodified 1432.6947 0.69465686 1818 P60891 PRPS1 Ribose-phosphate pyrophosphokinase 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 4 2 24 3 2 1 2 2 2 2 2 2 2 2 2 2 2 2 25.53 24.737 2;3 2.8357E-32 25220 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 164.48 130.1 4831300000 2244600000 941300000 817060000 53295000 53379000 82270000 52570000 55903000 52037000 66231000 73092000 64850000 63778000 61464000 149480000 23374 1818 21358 196250;196251;196252;196253;196254;196255;196256;196257;196258;196259;196260;196261;196262;196263;196264;196265;196266;196267;196268;196269;196270;196271;196272;196273;196274;196275;196276;196277;196278;196279 156585;156586;156587;156588;156589;156590;156591;156592;156593;156594;156595;156596;156597;156598;156599;156600;156601;156602;156603;156604;156605;156606;156607;156608;156609;156610;156611;156612;156613;156614;156615;156616;156617;156618;156619;156620;156621;156622;156623;156624 156620 35 IFSIIAEGEMHEAIK Oxidation (M) 1702.86 0.86000763 149 O00410 IPO5 Importin-5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.27 0.445 8 3 8 2 1 80.543 75.187 2;3 3.0414E-31 97150 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 132.56 108.82 413500000 344820000 63978000 4700900 0 0 0 0 0 0 0 0 0 0 0 0 23375 149 21359 196280;196281;196282;196283;196284;196285;196286;196287;196288;196289;196290 156625;156626;156627;156628;156629;156630;156631;156632;156633 156630 204 6 IFSIPDEK Unmodified 947.4964 0.49639797 5198 Q9Y4E8 USP15 Ubiquitin carboxyl-terminal hydrolase 15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61.213 60.009 2 0.002399 76887 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.28 83.364 533600000 15438000 374420000 12175000 9404700 5962700 11543000 7974100 0 6032400 12723000 15769000 13575000 13627000 13340000 21611000 23376 5198 21360 196291;196292;196293;196294;196295;196296;196297;196298;196299;196300;196301;196302;196303;196304 156634;156635;156636;156637;156638;156639;156640 156635 5 IFSIVEQR Unmodified 990.54983 0.54983053 961 P12081 HARS Histidine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 60.371 60.468 2 0.0043522 70024 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 111.01 27.393 98395000 0 0 0 8059700 2347100 5437200 4144100 6034100 2286800 6385200 13015000 12596000 0 8699500 29390000 23377 961 21361 196305;196306;196307;196308;196309;196310;196311;196312;196313;196314;196315 156641;156642;156643;156644;156645;156646;156647;156648 156647 8 IFSNTDPDK Unmodified 1035.4873 0.48728985 2704 Q53H82 LACTB2 Beta-lactamase-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 27.446 22.556 2 0.039846 29396 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.91 40.355 170890000 8805100 162090000 0 0 0 0 0 0 0 0 0 0 0 0 0 23378 2704 21362 196316;196317 156649 156649 1 IFSNTDPDKK Unmodified 1163.5823 0.58225287 2704 Q53H82 LACTB2 Beta-lactamase-like protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 5 1 2 2 20.489 17 2;3 3.7023E-10 22725 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 172.21 128.41 169980000 13952000 133470000 22559000 0 0 0 0 0 0 0 0 0 0 0 0 23379 2704 21363 196318;196319;196320;196321;196322 156650;156651;156652 156651 2 IFSPNVVNLTLVDLPGMTK Oxidation (M) 2073.118 0.11801323 154 O00429 DNM1L Dynamin-1-like protein yes yes 0 1 0 By MS/MS 10 0 1 1 94.819 94.966 2 5.6866E-07 110101 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.078 71.355 3465800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3465800 23380 154 21364 196323 156653 156653 213 1 IFSQETLTK Unmodified 1065.5706 0.57062555 4901 Q9UHG3 PCYOX1 Prenylcysteine oxidase 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 44.509 43.985 2 0.019674 49698 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 53.775 30.251 31997000 0 0 0 23214000 8783000 0 0 0 0 0 0 0 0 0 0 23381 4901 21365 196324;196325 156654 156654 1 IFTASNVSSVPLPAENVTITAGQR Unmodified 2471.302 0.30200227 2380 Q14157 UBAP2L Ubiquitin-associated protein 2-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 84.672 84.777 3 3.7971E-18 98150 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 83.905 76.952 87226000 0 0 0 0 5232400 0 0 5338000 4914500 21121000 20964000 0 0 5327000 24329000 23382 2380 21366 196326;196327;196328;196329;196330;196331;196332 156655;156656;156657;156658;156659;156660;156661;156662 156655 8 IFTDLQSEGFPVIETSTLTEEGVIK Unmodified 2752.4059 0.40585821 4263 Q9BZE4 GTPBP4 Nucleolar GTP-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 97.341 93.836 3 1.5764E-46 115586 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.65 113.43 36267000 0 33979000 2288300 0 0 0 0 0 0 0 0 0 0 0 0 23383 4263 21367 196333;196334;196335 156663;156664;156665;156666 156664 4 IFTFAEK Unmodified 854.4538 0.45380487 1740 P54577 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.038 56.164 2 0.029029 63873 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 76.035 29.268 401440000 0 0 0 15623000 13200000 27393000 21744000 14798000 14125000 27796000 48004000 48242000 20940000 39278000 110300000 23384 1740 21368 196336;196337;196338;196339;196340;196341;196342;196343;196344;196345;196346;196347 156667;156668;156669;156670 156667 4 IFTFGSYR Unmodified 989.49707 0.49706667 1644;4213 P51003;Q9NRJ5;Q9BWT3 PAPOLA;PAPOLB;PAPOLG Poly(A) polymerase alpha;Poly(A) polymerase beta;Poly(A) polymerase gamma no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 69.765 69.911 2 0.016804 80484 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.682 40.08 24994000 0 0 0 0 0 4309800 2007300 3425300 2387900 4258800 3412900 0 2711900 2480500 0 23385 1644;4213 21369 196348;196349;196350;196351;196352;196353;196354;196355 156671;156672;156673 156671 3 IFTIESTR Unmodified 965.5182 0.51819605 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 50.964 51.115 2 0.0050366 57883 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 114.78 90.109 338370000 0 0 0 24189000 21100000 27041000 20816000 21182000 22256000 26009000 41727000 45252000 28500000 28650000 31643000 23386 2392 21370 196356;196357;196358;196359;196360;196361;196362;196363;196364;196365;196366;196367 156674;156675;156676;156677;156678;156679;156680;156681;156682;156683;156684;156685;156686;156687;156688;156689;156690 156678 17 IFTMAEVYGIR Oxidation (M) 1314.6642 0.66420836 3946 Q96P70 IPO9 Importin-9 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 71.723 71.845 2 0.00034839 82613 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 82.287 69.25 76897000 0 0 0 0 4509900 12431000 6325400 0 4125400 11384000 6500300 7943000 6620600 8610000 8446800 23387 3946 21371 196368;196369;196370;196371;196372;196373;196374;196375;196376;196377;196378 156691;156692;156693;156694;156695;156696;156697;156698;156699;156700;156701 156692 5430 11 IFTMAEVYGIR Unmodified 1298.6693 0.66929373 3946 Q96P70 IPO9 Importin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 83.382 83.491 2 0.00047061 96274 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.213 60.784 12275000 0 0 0 0 0 3535400 0 0 0 0 0 0 0 0 8739800 23388 3946 21371 196379;196380;196381 156702;156703;156704 156703 3 IFTPLLHQIELEK Unmodified 1579.8974 0.89737941 947 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 83.442 83.573 3 0.04618 96862 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 24.399 13.669 56970000 0 0 0 0 0 3440500 0 0 0 0 4855700 0 0 3252700 45421000 23389 947 21372 196382;196383;196384;196385 156705 156705 1 IFTSIGEDYDER Unmodified 1443.6518 0.65178899 1343 P35232 PHB Prohibitin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 62.511 62.383 2 0.0040665 72183 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 71.349 53.037 7275500 0 0 0 2033700 0 0 2004900 3236900 0 0 0 0 0 0 0 23390 1343 21373 196386;196387;196388;196389 156706;156707;156708;156709 156709 4 IFTVNPK Unmodified 817.46979 0.46978929 3616;2438 Q14693;Q92539 LPIN1;LPIN2 Phosphatidate phosphatase LPIN1;Phosphatidate phosphatase LPIN2 no no 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 40.24 40.41 2 0.027575 45603 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 77.374 32.653 82380000 0 0 0 4918600 4638400 6129200 5713000 8823200 4294900 8495600 11176000 8667600 8259000 0 11264000 23391 2438;3616 21374 196390;196391;196392;196393;196394;196395;196396;196397;196398;196399;196400 156710;156711;156712;156713;156714;156715;156716;156717;156718 156718 9 IFVAHSK Unmodified 800.45447 0.45447358 1788 P56945;Q14511 BCAR1;NEDD9 Breast cancer anti-estrogen resistance protein 1;Enhancer of filamentation 1;Enhancer of filamentation 1 p55 yes no 0 0 0 By MS/MS 2 0 1 1 15.346 13.003 2 0.035514 16609 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 84.244 22.246 10669000 0 0 10669000 0 0 0 0 0 0 0 0 0 0 0 0 23392 1788 21375 196401 156719 156719 1 IFVEFSIASETHK Unmodified 1506.7718 0.77184455 4912 Q9UHX1 PUF60 Poly(U)-binding-splicing factor PUF60 yes yes 0 0 0 By MS/MS 2 0 1 1 84.473 76.342 3 0.0013096 99392 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.891 48.548 17610000 17610000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23393 4912 21376 196402 156720 156720 1 IFVFEPPPGVK Unmodified 1228.6856 0.68559572 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.578 82.64 2 2.6972E-05 95504 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 120.07 91.675 407500000 0 0 0 15097000 18996000 36587000 23397000 29935000 22426000 39358000 29805000 54767000 37889000 36437000 62801000 23394 2392 21377 196403;196404;196405;196406;196407;196408;196409;196410;196411;196412;196413;196414 156721;156722;156723;156724;156725;156726;156727;156728;156729 156722 8 IFVGGIPHNCGETELR Unmodified 1797.8832 0.88320269 3818 Q96EP5 DAZAP1 DAZ-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 63.995 64.376 3 0.030815 72833 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 27.496 16.709 17727000 0 0 0 0 0 0 0 0 0 0 0 0 0 4921700 12805000 23395 3818 21378 196415;196416 156730;156731 156730 2 IFVGGLSANTVVEDVK Unmodified 1646.8879 0.88793694 3797 Q96DH6 MSI2 RNA-binding protein Musashi homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 83.484 82.231 2 1.0106E-21 95482 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 117.79 94.557 144630000 8931000 63845000 8309700 0 4800700 4457700 2480000 4476300 3822100 10223000 7687300 6580800 0 5415300 13599000 23396 3797 21379 196417;196418;196419;196420;196421;196422;196423;196424;196425;196426;196427;196428;196429;196430 156732;156733;156734;156735;156736;156737;156738;156739;156740;156741;156742;156743;156744;156745;156746 156733 14 IFVGGLSPDTPEEK Unmodified 1487.7508 0.75077476 2365 Q14103 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.21 3.93 12 2 15 2 8 4 1 1 1 1 2 1 1 2 2 1 1 1 69.669 68.013 2;3 1.2501E-26 78048 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 155 136.69 9878900000 232650000 7360800000 120850000 85035000 89038000 107400000 115340000 147140000 95629000 124890000 337590000 340390000 134610000 181950000 405590000 23397 2365 21380 196431;196432;196433;196434;196435;196436;196437;196438;196439;196440;196441;196442;196443;196444;196445;196446;196447;196448;196449;196450;196451;196452;196453;196454;196455;196456;196457;196458;196459 156747;156748;156749;156750;156751;156752;156753;156754;156755;156756;156757;156758;156759;156760;156761;156762;156763;156764;156765;156766;156767;156768;156769;156770;156771;156772;156773;156774;156775;156776;156777;156778;156779;156780;156781;156782;156783;156784 156781 37 IFVGNVSAACTSQELR Unmodified 1750.8672 0.86721827 3948 Q96PK6 RBM14 RNA-binding protein 14 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 68.669 68.623 2 0.0006403 77926 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 75.695 50.841 19992000 0 0 0 2336600 2224300 0 2482200 0 0 0 0 4114800 4511300 4323000 0 23398 3948 21381 196460;196461;196462;196463;196464;196465;196466;196467 156785;156786;156787;156788;156789;156790;156791;156792 156788 8 IFVNDDRHVMAK Oxidation (M) 1459.7242 0.72418285 2207 Q12906 ILF3 Interleukin enhancer-binding factor 3 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 26.333 26.439 3 0.0059793 28399 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 42.031 24.819 116140000 0 0 0 0 14557000 22858000 18055000 12031000 11397000 0 0 0 0 0 37240000 23399 2207 21382 196468;196469;196470;196471;196472;196473 156793;156794;156795;156796;156797 156793 3593 1 IFVNDDRHVMAK Unmodified 1443.7293 0.72926823 2207 Q12906 ILF3 Interleukin enhancer-binding factor 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.328 35.509 3 1.667E-05 37561 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 92.943 63.603 277280000 0 0 0 16037000 8228500 25959000 12920000 13613000 13942000 21453000 18361000 27215000 25184000 23367000 71001000 23400 2207 21382 196474;196475;196476;196477;196478;196479;196480;196481;196482;196483;196484;196485 156798;156799;156800;156801;156802;156803;156804;156805;156806;156807;156808;156809;156810;156811 156802 14 IFYPEIEEVQALDDTER Unmodified 2065.9844 0.9844161 1330 P33316 DUT Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial yes yes 0 0 0 By MS/MS 10 0 2 2 87.486 87.636 2;3 1.745E-31 101306 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 145.17 130.29 14276000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14276000 23401 1330 21383 196486;196487 156812;156813;156814 156812 3 IFYPEIEEVQALDDTERGSGGFGSTGK Unmodified 2901.3668 0.36684695 1330 P33316 DUT Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial yes yes 0 0 1 By MS/MS 10 0 1 1 85.975 86.143 3 0.017706 99563 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 18.316 11.952 6192100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6192100 23402 1330 21384 196488 156815 156815 1 IFYPETTDIYDR Unmodified 1531.7195 0.71947463 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 74.169 74.129 2 3.2276E-08 86004 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 127.76 91.939 80543000 0 0 0 15075000 11996000 16429000 9370000 7512800 0 0 12053000 0 8107800 0 0 23403 1518 21385 196489;196490;196491;196492;196493;196494;196495;196496;196497;196498 156816;156817;156818;156819;156820;156821;156822;156823;156824;156825;156826 156823 11 IFYPETTDIYDRK Unmodified 1659.8144 0.81443765 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.47 3.66 11 3 29 4 5 5 3 1 2 2 2 3 1 3 3 3 3 3 67.431 66.179 2;3 1.2952E-12 81662 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 135.86 97.555 5534000000 381190000 1414800000 513710000 188180000 150390000 314680000 225350000 222590000 197820000 265310000 293710000 355800000 220840000 286750000 502910000 23404 1518 21386 196499;196500;196501;196502;196503;196504;196505;196506;196507;196508;196509;196510;196511;196512;196513;196514;196515;196516;196517;196518;196519;196520;196521;196522;196523;196524;196525;196526;196527;196528;196529;196530;196531;196532;196533;196534;196535;196536;196537;196538;196539;196540;196541 156827;156828;156829;156830;156831;156832;156833;156834;156835;156836;156837;156838;156839;156840;156841;156842;156843;156844;156845;156846;156847;156848;156849;156850;156851;156852;156853;156854;156855;156856;156857;156858;156859;156860;156861;156862;156863;156864;156865;156866 156856 37 IFYVDTLK Unmodified 997.54843 0.54843354 5044 Q9UNX4 WDR3 WD repeat-containing protein 3 yes yes 0 0 0 By MS/MS 2 0 1 1 78.113 69.983 2 0.025379 92129 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.229 28.657 5259500 5259500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23405 5044 21387 196542 156867 156867 1 IGADEEIDDFK Unmodified 1250.5667 0.56666238 3537 Q8WUA2 PPIL4 Peptidyl-prolyl cis-trans isomerase-like 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 57.144 57.334 2 0.0031736 64333 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 74.162 54.375 79493000 0 0 0 0 6060500 9889400 7090100 4444600 5267000 7043000 9820400 9781400 0 7363100 12733000 23406 3537 21388 196543;196544;196545;196546;196547;196548;196549;196550;196551;196552 156868;156869;156870;156871;156872;156873;156874 156872 7 IGAEVYHNLK Unmodified 1142.6084 0.60840804 827 P06733 ENO1 Alpha-enolase yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 24 2 1 2 2 2 2 2 2 2 2 2 3 36.764 36.995 2;3 4.0342E-06 39324 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 149.65 84.401 3462100000 0 0 0 266150000 3225000 25278000 33838000 46943000 15295000 38658000 530270000 536320000 67904000 318850000 1579400000 23407 827 21389 196553;196554;196555;196556;196557;196558;196559;196560;196561;196562;196563;196564;196565;196566;196567;196568;196569;196570;196571;196572;196573;196574;196575;196576 156875;156876;156877;156878;156879;156880;156881;156882;156883;156884;156885;156886;156887;156888 156877 9 IGAFGYMECSAK Unmodified 1332.5842 0.58424348 1851 P61586 RHOA Transforming protein RhoA yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 63.315 63.419 2 6.1236E-08 72450 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 119.16 108 197930000 0 0 0 8424400 9300700 0 10549000 13598000 6644800 12419000 30493000 32825000 16347000 19111000 38212000 23408 1851 21390 196577;196578;196579;196580;196581;196582;196583;196584;196585;196586;196587 156889;156890;156891;156892;156893;156894;156895;156896;156897;156898;156899;156900;156901;156902;156903 156896 15 IGAFGYMECSAK Oxidation (M) 1348.5792 0.5791581 1851 P61586 RHOA Transforming protein RhoA yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 2 1 48.976 49.207 2 0.0018034 55409 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 62.303 50.813 51638000 0 0 0 3078400 0 0 0 5112400 0 0 28169000 15278000 0 0 0 23409 1851 21390 196588;196589;196590;196591;196592;196593;196594 156904;156905;156906;156907;156908;156909;156910 156909 3002 7 IGAFNIQSFGDSK Unmodified 1382.683 0.68302954 3674 Q92874 DNASE1L2 Deoxyribonuclease-1-like 2 yes yes 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 77.423 77.296 2 0.00012394 90031 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 100.55 88.507 25646000 0 0 0 20310000 0 3236000 0 0 0 2099900 0 0 0 0 0 23410 3674 21391 196595;196596;196597 156911 156911 1 IGAHSHIR Unmodified 889.48823 0.48823332 5077 Q9Y230 RUVBL2 RuvB-like 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 6.5062 6.6527 2 0.036695 4478 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.736 29.244 54750000 0 0 0 0 4441500 7307300 6312400 5929800 6242200 4241500 3792500 3187900 4108600 4454700 4731900 23411 5077 21392 196598;196599;196600;196601;196602;196603;196604;196605;196606;196607;196608 156912 156912 1 IGALEGYR Unmodified 877.46577 0.46576654 366 O43776 NARS Asparagine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 40.111 40.239 2 0.016586 44353 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 67.032 29.938 179050000 0 0 0 7678900 6331800 9100700 8285200 7033900 0 15150000 29955000 0 16892000 25509000 53112000 23412 366 21393 196609;196610;196611;196612;196613;196614;196615;196616;196617;196618 156913;156914;156915;156916;156917;156918 156916 6 IGALQGAVDR Unmodified 998.55089 0.55089316 5047 Q9UP83 COG5 Conserved oligomeric Golgi complex subunit 5 yes yes 0 0 0 By MS/MS 10 0 1 1 38.752 38.777 2 0.022292 43182 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 61.09 27.293 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23413 5047 21394 196619 156919 156919 1 IGALQLQLSQLHEQCSSLEK Unmodified 2281.1736 0.17363063 3998 Q96T51 RUFY1 RUN and FYVE domain-containing protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 78.819 79.065 3 0.016064 90996 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 25.41 21.458 12745000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12745000 23414 3998 21395 196620 156920 156920 1 IGAMLAYTPLDEK Oxidation (M) 1436.7221 0.72211717 2472;4860 Q9UBU8;Q15014 MORF4L1;MORF4L2 Mortality factor 4-like protein 1;Mortality factor 4-like protein 2 no no 0 1 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 70.027 70.188 2 0.021861 80720 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 51.064 23.735 10245000 0 0 0 0 0 0 0 2745000 0 5056800 0 0 0 2443100 0 23415 4860;2472 21396 196621;196622;196623 156921 156921 0 IGAPGVEEIK Unmodified 1011.5601 0.56006086 2507 Q15208 STK38 Serine/threonine-protein kinase 38 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 48.132 48.286 2 0.0044278 53355 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 72.879 20.094 74477000 0 0 0 8171900 6636100 0 7637300 0 0 0 15382000 9126800 0 10821000 16702000 23416 2507 21397 196624;196625;196626;196627;196628;196629;196630;196631;196632 156922;156923;156924;156925;156926;156927;156928;156929;156930 156926 9 IGAQSHGDNSCGIEIVCK Unmodified 1943.8829 0.88294469 2326 Q13613 MTMR1 Myotubularin-related protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 50.272 46.356 3 0.0026654 58379 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 37.698 33.435 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23417 2326 21398 196633 156931 156931 1 IGAREPEEAHK Unmodified 1235.6258 0.62584901 2764 Q5SY16 NOL9 Polynucleotide 5'-hydroxyl-kinase NOL9 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 8.1968 7.7135 3 0.0049408 5994 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 54.27 18.759 249790000 91401000 0 6008400 0 6605800 7010200 0 9777700 0 0 31313000 26522000 23957000 27065000 20128000 23418 2764 21399 196634;196635;196636;196637;196638;196639;196640;196641;196642;196643;196644 156932;156933;156934;156935;156936;156937 156936 6 IGASTLLSDIER Unmodified 1273.6878 0.68778057 5134 Q9Y315 DERA Deoxyribose-phosphate aldolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 81.373 81.414 2 1.7103E-05 94011 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 105.86 76.777 71150000 0 0 0 1630100 3590900 0 5019400 4725800 0 14160000 10907000 0 5788200 6138900 19190000 23419 5134 21400 196645;196646;196647;196648;196649;196650;196651;196652;196653 156938;156939;156940;156941;156942;156943;156944;156945;156946 156939 9 IGAVEEELNRVTELFMDNK Unmodified 2206.094 0.093983325 1695 P52732 KIF11 Kinesin-like protein KIF11 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 98.671 93.252 3 9.9368E-10 118482 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.39 61.998 17864000 5930500 11933000 0 0 0 0 0 0 0 0 0 0 0 0 0 23420 1695 21401 196654;196655;196656 156947;156948 156948 2 IGAVLNGVIMSAPGVEPK Oxidation (M) 1766.9601 0.96005603 5342 yes yes 0 1 0 By MS/MS 3 0 1 1 88.02 84.809 2 0.0061725 101488 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 43.544 10.315 + 9209000 0 9209000 0 0 0 0 0 0 0 0 0 0 0 0 0 23421 5342 21402 196657 156949 156949 6733 1 IGAVSAPIYNAHEK Unmodified 1468.7674 0.76742787 16 A3KMH1 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 45.48 45.831 3 0.0019351 51370 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 49.216 35.252 74119000 0 0 0 0 0 14073000 0 0 8838700 0 22475000 28732000 0 0 0 23422 16 21403 196658;196659;196660;196661 156950;156951;156952;156953 156951 4 IGCIITAR Unmodified 902.50077 0.50077184 2205 Q12904 AIMP1 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1;Endothelial monocyte-activating polypeptide 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 43.233 43.393 2 0.029639 48387 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 56.014 24.956 131630000 0 0 0 6110300 6490200 6977400 5856200 7212800 5798000 10749000 17669000 27830000 0 13711000 23229000 23423 2205 21404 196662;196663;196664;196665;196666;196667;196668;196669;196670;196671;196672 156954;156955;156956;156957 156954 4 IGDEYFTFITDCK Unmodified 1607.7178 0.71776007 1570 P49368 CCT3 T-complex protein 1 subunit gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 1 3 2 89.387 85.053 2;3 3.4947E-34 106223 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 212.82 185.04 1130800000 77437000 1029900000 23450000 0 0 0 0 0 0 0 0 0 0 0 0 23424 1570 21405 196673;196674;196675;196676;196677;196678 156958;156959;156960;156961;156962;156963 156958 6 IGDFGLATDHLAFSADSK Unmodified 1863.9003 0.90029254 4821 Q9P2K8 EIF2AK4 Eukaryotic translation initiation factor 2-alpha kinase 4 yes yes 0 0 0 By MS/MS 2 0 1 1 86.202 81.428 3 0.00039199 101213 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.073 42.918 14888000 0 14888000 0 0 0 0 0 0 0 0 0 0 0 0 0 23425 4821 21406 196679 156964 156964 1 IGDFGLATK Unmodified 920.49673 0.49673232 1710 P53350 PLK1 Serine/threonine-protein kinase PLK1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 55.72 54.767 2 0.016766 62109 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 56.258 26.073 52531000 0 0 9904900 8107900 11745000 0 12329000 10444000 0 0 0 0 0 0 0 23426 1710 21407 196680;196681;196682;196683;196684 156965;156966;156967 156965 3 IGDFGLATVK Unmodified 1019.5651 0.56514624 769;919;1011 P10398;P04049;P15056 ARAF;RAF1;BRAF Serine/threonine-protein kinase A-Raf;RAF proto-oncogene serine/threonine-protein kinase;Serine/threonine-protein kinase B-raf no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 69.145 68.24 2 0.0016515 77913 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 104.01 55.258 778550000 0 260570000 47327000 22928000 25112000 35014000 31097000 36587000 31847000 42690000 45237000 57786000 45858000 40748000 55747000 23427 919;769;1011 21408 196685;196686;196687;196688;196689;196690;196691;196692;196693;196694;196695;196696;196697;196698;196699;196700 156968;156969;156970;156971;156972;156973;156974;156975;156976;156977;156978;156979;156980;156981;156982;156983 156971 16 IGDFGLTK Unmodified 849.45962 0.45961853 1159 P23458;O60674 JAK1;JAK2 Tyrosine-protein kinase JAK1;Tyrosine-protein kinase JAK2 yes no 0 0 0 By MS/MS 2.5 0.5 1 1 2 57.821 52.479 2 0.051144 64722 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 66.073 32.523 38886000 0 38886000 0 0 0 0 0 0 0 0 0 0 0 0 0 23428 1159 21409 196701;196702 156984 156984 1 IGDFGLVTSLK Unmodified 1148.6441 0.64412484 1091 P19525 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82.236 81.258 2 0.00023955 93673 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 105.98 79.013 579860000 119620000 127190000 34141000 6736400 14594000 28185000 18136000 16138000 15014000 36348000 31053000 33476000 18656000 30747000 49827000 23429 1091 21410 196703;196704;196705;196706;196707;196708;196709;196710;196711;196712;196713;196714;196715;196716;196717 156985;156986;156987;156988;156989;156990;156991;156992;156993;156994;156995;156996;156997;156998;156999 156989 15 IGDGMNAYVAYK Unmodified 1300.6122 0.61217279 2323 Q13596 SNX1 Sorting nexin-1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.44 3.62 2 1 6 1 2 1 1 1 1 1 1 59.695 58.404 2 3.1122E-14 74267 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.57 101.12 323300000 0 287710000 0 4131600 3779900 0 0 0 0 0 0 4528600 3130100 9184400 10829000 23430 2323 21411 196718;196719;196720;196721;196722;196723;196724;196725;196726 157000;157001;157002;157003 157000 4 IGDLGLATLK Unmodified 999.59645 0.59644637 4393;5174 Q9H4A3;Q96J92;Q9Y3S1 WNK1;WNK4;WNK2 Serine/threonine-protein kinase WNK1;Serine/threonine-protein kinase WNK4;Serine/threonine-protein kinase WNK2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73.516 72.528 2 6.5938E-06 83594 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 148.52 83.485 1374400000 44328000 341620000 81387000 42816000 54172000 63503000 64356000 69493000 59466000 81511000 85806000 102800000 97196000 84593000 101330000 23431 4393;5174 21412 196727;196728;196729;196730;196731;196732;196733;196734;196735;196736;196737;196738;196739;196740;196741 157004;157005;157006;157007;157008;157009;157010;157011;157012;157013;157014;157015;157016;157017;157018 157004 15 IGDLLVQQFSGENGER Unmodified 1760.8693 0.86932676 3012 Q6ZSZ5 ARHGEF18 Rho guanine nucleotide exchange factor 18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 78.56 78.739 2 2.7543E-21 90582 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 117.23 92.395 44113000 0 0 0 0 0 0 3433200 7885700 0 11243000 10039000 0 0 0 11513000 23432 3012 21413 196742;196743;196744;196745;196746 157019;157020;157021;157022;157023 157021 5 IGDLQAFQGHGAGNLAGLK Unmodified 1865.9748 0.97479489 860 P08195 SLC3A2 4F2 cell-surface antigen heavy chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 74.44 74.556 3 2.507E-50 85614 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 121.82 104.41 226150000 0 0 0 0 8504800 17517000 8490100 14049000 13968000 23863000 19886000 27388000 17180000 22776000 52529000 23433 860 21414 196747;196748;196749;196750;196751;196752;196753;196754;196755;196756;196757 157024;157025;157026;157027;157028;157029;157030;157031;157032;157033 157027 10 IGDLTGYCTNPNR Unmodified 1479.6776 0.67762659 4674 Q9NVN8 GNL3L Guanine nucleotide-binding protein-like 3-like protein yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 47.747 48.104 2 7.3947E-07 53275 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.4 96.877 42640000 0 0 0 0 0 5224100 0 0 3223200 6309900 5038500 6972600 5672400 4805500 5393400 23434 4674 21415 196758;196759;196760;196761;196762;196763;196764;196765 157034;157035;157036;157037 157035 4 IGDPLLEDTR Unmodified 1127.5823 0.58225287 1561 P49189 ALDH9A1 4-trimethylaminobutyraldehyde dehydrogenase yes yes 0 0 0 By MS/MS 10 0 1 1 60.705 60.019 2 0.020583 69308 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 90.108 55.545 28750000 0 0 0 28750000 0 0 0 0 0 0 0 0 0 0 0 23435 1561 21416 196766 157038 157038 0 IGDQEFDHLPALLEFYK Unmodified 2034.0098 0.0098429899 1500 P46109 CRKL Crk-like protein yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 98.084 92.703 3 3.6406E-07 116155 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.814 66.858 124080000 88729000 35352000 0 0 0 0 0 0 0 0 0 0 0 0 0 23436 1500 21417 196767;196768;196769 157039;157040 157040 2 IGDSSQGDNNLQK Unmodified 1374.6375 0.63753591 2112 Q05086 UBE3A Ubiquitin-protein ligase E3A yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.246 15.417 2 9.4738E-20 14476 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 155 130.23 48759000 0 0 0 1818200 1695400 2649400 2652500 2141500 1515400 3605600 6467000 5607800 4749900 5037700 10819000 23437 2112 21418 196770;196771;196772;196773;196774;196775;196776;196777;196778;196779;196780;196781 157041;157042;157043;157044 157042 4 IGDTPMVRINK Unmodified 1242.6754 0.67544174 910 P0DN79;P35520 CBS Cystathionine beta-synthase yes no 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 51.256 45.274 3 0.00039616 62497 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.149 70.771 68064000 66804000 0 1259900 0 0 0 0 0 0 0 0 0 0 0 0 23438 910 21419 196782;196783 157045 157045 0 IGDTSVSYK Unmodified 968.48148 0.48147619 1111 P20700 LMNB1 Lamin-B1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 26.749 26.952 2 0.013016 28892 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 60.436 37.394 87155000 0 0 0 9657100 2681800 6080200 4412300 0 3370200 8476800 10544000 10973000 9907800 5465100 15586000 23439 1111 21420 196784;196785;196786;196787;196788;196789;196790;196791;196792;196793;196794 157046;157047;157048;157049 157047 4 IGDVSSSAVK Unmodified 961.50803 0.50802529 4251 Q9BYJ9 YTHDF1 YTH domain-containing family protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.904 23.11 2 0.0027524 24125 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 80.455 46.282 177220000 0 0 0 8134200 4334400 7992300 9873300 10627000 8721100 18957000 19433000 17785000 21356000 21113000 28895000 23440 4251 21421 196795;196796;196797;196798;196799;196800;196801;196802;196803;196804;196805;196806 157050;157051;157052;157053;157054;157055;157056;157057;157058 157057 8 IGDVVGSSGANQQTSGK Unmodified 1603.7802 0.7801774 5085 Q9Y263 PLAA Phospholipase A-2-activating protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.48 1 2 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 31.695 31.284 2 5.4706E-105 31838 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 207.66 192.97 697080000 51854000 412520000 0 14872000 8685600 30320000 12558000 9646500 9711800 25716000 23899000 26089000 15128000 18650000 37436000 23441 5085 21422 196807;196808;196809;196810;196811;196812;196813;196814;196815;196816;196817;196818;196819;196820;196821;196822 157059;157060;157061;157062;157063;157064;157065;157066;157067;157068;157069;157070;157071;157072;157073;157074 157062 16 IGEEEIQKPEEK Unmodified 1427.7144 0.71438925 2539 Q15459 SF3A1 Splicing factor 3A subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.96 3.45 6 1 20 2 3 2 1 1 2 2 2 1 2 2 2 1 2 2 28.766 27.77 2;3 1.5193E-23 35428 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 173.64 145.87 1450900000 47628000 715140000 13242000 28119000 6215800 96380000 49358000 46665000 10268000 66734000 76776000 88987000 10087000 82360000 112950000 23442 2539 21423 196823;196824;196825;196826;196827;196828;196829;196830;196831;196832;196833;196834;196835;196836;196837;196838;196839;196840;196841;196842;196843;196844;196845;196846;196847;196848;196849 157075;157076;157077;157078;157079;157080;157081;157082;157083;157084;157085;157086;157087;157088 157079 11 IGEEFLTDLSQLK Unmodified 1491.7821 0.78207489 939 P11216 PYGB Glycogen phosphorylase, brain form yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 94.309 89.146 2 0.0023209 111901 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.229 69.341 92467000 4950500 86815000 701190 0 0 0 0 0 0 0 0 0 0 0 0 23443 939 21424 196850;196851;196852 157089;157090 157089 2 IGEEQSAEDAEDGPPELLFIHGGHTAK Unmodified 2846.3359 0.33588117 2615 Q16576 RBBP7 Histone-binding protein RBBP7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.59 3.61 7 2 20 5 3 1 2 1 1 2 2 2 3 2 1 1 3 78.536 77.264 3;4 0 88680 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 257.43 248.47 1880200000 1140200000 35435000 43051000 7486900 5012600 28523000 0 18311000 23051000 24657000 48166000 66687000 22347000 30328000 386910000 23444 2615 21425 196853;196854;196855;196856;196857;196858;196859;196860;196861;196862;196863;196864;196865;196866;196867;196868;196869;196870;196871;196872;196873;196874;196875;196876;196877;196878;196879;196880;196881 157091;157092;157093;157094;157095;157096;157097;157098;157099;157100;157101;157102;157103;157104;157105;157106;157107;157108;157109;157110;157111;157112;157113 157098 20 IGEEQSPEDAEDGPPELLFIHGGHTAK Unmodified 2872.3515 0.35153123 2169 Q09028 RBBP4 Histone-binding protein RBBP4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS 7.5 3.55 2 2 8 2 1 1 1 1 1 1 1 1 2 79.07 77.713 3;4 2.2807E-22 89089 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.138 48.01 568720000 358780000 3194500 18491000 0 0 10777000 0 10149000 9317100 15580000 13702000 21472000 0 0 107260000 23445 2169 21426 196882;196883;196884;196885;196886;196887;196888;196889;196890;196891;196892;196893 157114;157115;157116;157117;157118;157119;157120 157116 5 IGEFCMVYSEVPNFSEPNPEYSTQQAPNK Oxidation (M) 3377.4857 0.48565823 4084 Q9BQ15 NABP2 SOSS complex subunit B1 yes yes 0 1 0 By MS/MS 2 0 1 1 88.397 83.555 3 1.1713E-06 103860 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 42.885 40.88 27309000 0 27309000 0 0 0 0 0 0 0 0 0 0 0 0 0 23446 4084 21427 196894 157121 157121 5589 1 IGEFCMVYSEVPNFSEPNPEYSTQQAPNK Unmodified 3361.4907 0.49074361 4084 Q9BQ15 NABP2 SOSS complex subunit B1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 91.949 87.887 3 1.7396E-12 109153 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.881 70.876 31702000 0 31702000 0 0 0 0 0 0 0 0 0 0 0 0 0 23447 4084 21427 196895;196896 157122;157123;157124 157122 3 IGEGTYGTVFK Unmodified 1170.5921 0.59208927 2036 Q00535 CDK5 Cyclin-dependent-like kinase 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58.874 57.73 2 0.00055317 71399 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 119.75 95.792 397110000 18798000 201210000 11489000 4619500 0 17941000 11398000 9133200 10459000 14305000 18465000 25477000 14949000 15499000 23363000 23448 2036 21428 196897;196898;196899;196900;196901;196902;196903;196904;196905;196906;196907;196908;196909;196910 157125;157126;157127;157128;157129;157130;157131;157132;157133;157134;157135;157136;157137;157138 157135 14 IGEGTYGVVYK Unmodified 1184.6077 0.60773933 822;1180 P06493;P24941 CDK1;CDK2 Cyclin-dependent kinase 1;Cyclin-dependent kinase 2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 52.131 50.82 2 1.9652E-05 64999 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.89 33.275 3562800000 79672000 1700000000 79884000 82124000 75091000 143500000 118340000 106650000 107580000 181190000 176480000 198390000 142180000 137080000 234640000 23449 822;1180 21429 196911;196912;196913;196914;196915;196916;196917;196918;196919;196920;196921;196922;196923;196924;196925;196926 157139;157140;157141;157142;157143;157144;157145;157146;157147;157148;157149;157150;157151;157152;157153;157154;157155 157147 16 IGEHMEEHGIK Oxidation (M) 1294.5976 0.59758535 2641 Q16881 TXNRD1 Thioredoxin reductase 1, cytoplasmic yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 1 3 2 13.783 10.665 2;3 4.062E-05 14603 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.4 81.139 365240000 38025000 88770000 238440000 0 0 0 0 0 0 0 0 0 0 0 0 23450 2641 21430 196927;196928;196929;196930;196931;196932 157156;157157;157158;157159;157160 157156 4294 1 IGEHMEEHGIK Unmodified 1278.6027 0.60267073 2641 Q16881 TXNRD1 Thioredoxin reductase 1, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 5.62 4.07 1 6 6 3 2 2 1 1 1 1 1 1 30.37 28.919 2;3 2.4428E-09 32503 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 142.83 109.43 716810000 343110000 139660000 75434000 5394000 0 0 3348000 5837700 0 0 37597000 0 0 28707000 77726000 23451 2641 21430 196933;196934;196935;196936;196937;196938;196939;196940;196941;196942;196943;196944;196945 157161;157162;157163;157164;157165;157166;157167;157168;157169;157170 157166 7 IGEHTPSALAIMENANVLAR Oxidation (M) 2122.0841 0.084087341 771 P04075 ALDOA Fructose-bisphosphate aldolase A yes yes 0 1 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 2 2 1 2 73.842 74.05 3 2.1123E-21 84576 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.544 80.779 269710000 0 0 0 0 0 3608100 0 0 0 8727200 37624000 31703000 0 15581000 172470000 23452 771 21431 196946;196947;196948;196949;196950;196951;196952;196953;196954 157171;157172;157173;157174;157175 157171 923 5 IGEHTPSALAIMENANVLAR Unmodified 2106.0892 0.089172718 771 P04075 ALDOA Fructose-bisphosphate aldolase A yes yes 0 0 0 By MS/MS 10 0 1 1 85.807 85.975 3 1.8825E-66 99391 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 147.09 128.93 55618000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55618000 23453 771 21431 196955 157176 157176 1 IGELFSK Unmodified 792.43815 0.43815481 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 49.208 47.661 2 0.023193 59004 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 105.39 25.937 2834300000 486790000 1052900000 634060000 0 0 75753000 53752000 49643000 46035000 76826000 0 77085000 71583000 73763000 136090000 23454 1986 21432 196956;196957;196958;196959;196960;196961;196962;196963;196964;196965;196966;196967;196968 157177;157178;157179;157180;157181;157182;157183;157184;157185;157186 157181 10 IGELLDQASVTR Unmodified 1300.6987 0.69867961 4715 Q9NX46 ADPRHL2 Poly(ADP-ribose) glycohydrolase ARH3 yes yes 0 0 0 By MS/MS 10 0 1 1 61.838 62.417 2 0.0013843 70585 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.297 72.211 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23455 4715 21433 196969 157187 157187 1 IGEMPLTDSILCDGLTDAFHNCHMGITAENVAK 2 Oxidation (M) 3661.6521 0.6520884 4207 Q9BWD1 ACAT2 Acetyl-CoA acetyltransferase, cytosolic yes yes 0 2 0 By MS/MS 3 0 1 1 92.097 88.878 4 9.3775E-06 106409 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 40.544 35.385 7059000 0 7059000 0 0 0 0 0 0 0 0 0 0 0 0 0 23456 4207 21434 196970 157188 157188 5684;5685 1 IGEMPLTDSILCDGLTDAFHNCHMGITAENVAK Oxidation (M) 3645.6572 0.65717378 4207 Q9BWD1 ACAT2 Acetyl-CoA acetyltransferase, cytosolic yes yes 0 1 0 By MS/MS 3 0 1 1 94.784 91.528 4 2.0949E-06 109664 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 41.209 39.547 6764800 0 6764800 0 0 0 0 0 0 0 0 0 0 0 0 0 23457 4207 21434 196971 157189 157189 5684;5685 1 IGEMPLTDSILCDGLTDAFHNCHMGITAENVAK Unmodified 3629.6623 0.66225916 4207 Q9BWD1 ACAT2 Acetyl-CoA acetyltransferase, cytosolic yes yes 0 0 0 By MS/MS 2 0 1 1 97.828 89.698 4 2.4849E-18 115809 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.283 53.152 17307000 17307000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23458 4207 21434 196972 157190 157190 1 IGEVDVEQHTLAK Unmodified 1437.7464 0.74635808 1003 P14635 CCNB1 G2/mitotic-specific cyclin-B1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.56 3.62 4 1 11 3 2 1 1 1 1 1 1 1 1 1 1 1 46.231 44.883 2;3 8.9722E-09 50464 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 109.84 94.305 413190000 0 164760000 22798000 13279000 0 25317000 16975000 15637000 13967000 22512000 17966000 32085000 19742000 27558000 20589000 23459 1003 21435 196973;196974;196975;196976;196977;196978;196979;196980;196981;196982;196983;196984;196985;196986;196987;196988 157191;157192;157193;157194;157195;157196;157197;157198;157199;157200;157201;157202;157203;157204;157205;157206;157207;157208;157209;157210;157211 157194 21 IGEVSSPK Unmodified 815.43888 0.43888309 1349 P35251 RFC1 Replication factor C subunit 1 yes yes 0 0 0 By MS/MS 10 0 1 1 16.417 16.216 2 0.047929 16248 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 47.657 6.1552 3299600 0 0 0 0 3299600 0 0 0 0 0 0 0 0 0 0 23460 1349 21436 196989 157212 157212 1 IGEYLEK Unmodified 850.44363 0.44363412 3170 Q86VP6 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.938 33.122 2 0.031655 34978 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.616 6.6231 280960000 0 0 0 14488000 8665300 27539000 14469000 14347000 7847900 28849000 32227000 30685000 20582000 21616000 59644000 23461 3170 21437 196990;196991;196992;196993;196994;196995;196996;196997;196998;196999;197000;197001 157213;157214;157215;157216;157217 157213 5 IGFDVVTLSGTR Unmodified 1263.6823 0.68230126 4125 Q9BSD7 NTPCR Cancer-related nucleoside-triphosphatase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.111 81.157 2 0.00067768 93972 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 91.549 76.398 135930000 0 0 0 8208700 9927400 13956000 10143000 10399000 14115000 15333000 14035000 21393000 9814400 8603800 0 23462 4125 21438 197002;197003;197004;197005;197006;197007;197008;197009;197010;197011;197012;197013 157218;157219;157220;157221;157222;157223;157224;157225;157226;157227;157228;157229;157230;157231;157232 157219 15 IGFFNQQYAEQLR Unmodified 1612.7998 0.79979063 3421 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.582 80.643 2 9.3014E-20 92909 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 155.06 146.05 72278000 0 0 0 1248600 2234100 8272500 2886100 4676200 4108300 8998700 7755300 6933600 3674800 4666900 16823000 23463 3421 21439 197014;197015;197016;197017;197018;197019;197020;197021;197022;197023;197024;197025 157233;157234;157235;157236;157237;157238;157239;157240;157241;157242;157243;157244 157236 12 IGFFQGDIR Unmodified 1051.5451 0.5450795 1327 P33121 ACSL1 Long-chain-fatty-acid--CoA ligase 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 74.315 74.318 2 0.013807 85565 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 59.245 42.149 30606000 0 0 0 3174500 2441500 1792100 1834800 7190000 0 3421100 0 5311000 3191700 2249100 0 23464 1327 21440 197026;197027;197028;197029;197030;197031;197032;197033;197034 157245 157245 1 IGFIEEVK Unmodified 933.51713 0.51713341 3945 Q96P63 SERPINB12 Serpin B12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 2 1 1 1 1 1 1 1 1 2 1 1 63.927 63.927 1;2 0.0064875 72964 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 100.45 42.892 910350000 0 0 0 159110000 57242000 67895000 48891000 124140000 41420000 110620000 70061000 98958000 89906000 42110000 0 23465 3945 21441 197035;197036;197037;197038;197039;197040;197041;197042;197043;197044;197045;197046;197047;197048 157246;157247;157248;157249;157250;157251;157252;157253;157254;157255;157256;157257;157258;157259;157260;157261;157262 157254 16 IGFLNDK Unmodified 805.4334 0.43340378 3725 Q969T7 NT5C3B 7-methylguanosine phosphate-specific 5'-nucleotidase yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 57.184 50.174 2 0.044837 68166 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 124.89 21.907 49111000 26621000 22489000 0 0 0 0 0 0 0 0 0 0 0 0 0 23466 3725 21442 197049;197050 157263 157263 0 IGFPETTEEELEEIASENSDCIFPSAPDVK Unmodified 3352.5181 0.51806379 5167 Q9Y3F4 STRAP Serine-threonine kinase receptor-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 1 2 2 97.942 94.649 3;4 7.652E-78 116077 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.75 118.51 444850000 9441800 206210000 229200000 0 0 0 0 0 0 0 0 0 0 0 0 23467 5167 21443 197051;197052;197053;197054;197055 157264;157265;157266;157267;157268 157264 4 IGFPETTEEELEEIASENSDCIFPSAPDVKA Unmodified 3423.5552 0.55517758 5167 Q9Y3F4 STRAP Serine-threonine kinase receptor-associated protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 2 1 1 98.223 92.717 3;4 2.9004E-134 116649 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 151.02 146.98 114430000 84551000 11929000 17955000 0 0 0 0 0 0 0 0 0 0 0 0 23468 5167 21444 197056;197057;197058;197059 157269;157270;157271;157272;157273 157270 5 IGFPSTTPAK Unmodified 1017.5495 0.54949617 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 50.225 48.68 2 0.0099927 63046 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.378 47.204 540230000 129230000 177320000 6010500 10804000 16279000 14136000 16141000 15334000 14303000 19510000 26628000 28835000 17006000 16286000 32409000 23469 1286 21445 197060;197061;197062;197063;197064;197065;197066;197067;197068;197069;197070;197071;197072;197073;197074;197075;197076 157274;157275;157276;157277;157278;157279;157280 157274 6 IGFQSLIQK Unmodified 1032.5968 0.59678072 4292 Q9C0I1 MTMR12 Myotubularin-related protein 12 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.206 74.266 2 0.0030491 85592 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 91.783 39.919 65559000 0 0 0 5018600 4090000 5277600 3596500 5258000 3795200 6867200 7090500 5596900 4689100 4265100 10015000 23470 4292 21446 197077;197078;197079;197080;197081;197082;197083;197084;197085;197086;197087;197088 157281;157282;157283;157284;157285;157286;157287;157288;157289 157282 9 IGFVGFPSVGK Unmodified 1106.6124 0.61243078 5092 Q9Y295 DRG1 Developmentally-regulated GTP-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 81.896 81.938 2 0.00063009 94821 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 78.939 55.896 172870000 0 0 0 9481800 9988700 23276000 15280000 14693000 11828000 23181000 24582000 27538000 13019000 0 0 23471 5092 21447 197089;197090;197091;197092;197093;197094;197095;197096;197097;197098 157290;157291;157292;157293;157294;157295;157296;157297;157298;157299 157299 10 IGGAQNRSYSK Unmodified 1179.5996 0.59963426 994 P14174 MIF Macrophage migration inhibitory factor yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 3 2 2 9.6232 6.4264 2;3 1.4384E-15 10434 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 163.86 131.02 4162500000 3927900000 191840000 42665000 0 0 0 0 0 0 0 0 0 0 0 0 23472 994 21448 197099;197100;197101;197102;197103;197104;197105 157300;157301;157302;157303;157304;157305;157306;157307 157303 8 IGGASSRGENSYGLETVCK Unmodified 1983.932 0.93200337 2327 Q13614 MTMR2 Myotubularin-related protein 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 50.456 44.498 3 2.6289E-05 61121 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.511 45.037 54933000 49040000 0 5893000 0 0 0 0 0 0 0 0 0 0 0 0 23473 2327 21449 197106;197107 157308;157309 157308 2 IGGDAATTVNNSTPDFGFGGQK Unmodified 2153.0025 0.0025257806 3690 Q92945 KHSRP Far upstream element-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.03 3.41 7 1 24 1 5 2 2 2 2 2 2 2 2 2 2 2 2 2 72.817 71.827 2;3 2.2647E-87 82263 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 209.79 198.18 5863400000 33372000 4065900000 34890000 80191000 102510000 113030000 114280000 104480000 95324000 188360000 193000000 189140000 112440000 165580000 270850000 23474 3690 21450 197108;197109;197110;197111;197112;197113;197114;197115;197116;197117;197118;197119;197120;197121;197122;197123;197124;197125;197126;197127;197128;197129;197130;197131;197132;197133;197134;197135;197136;197137;197138;197139 157310;157311;157312;157313;157314;157315;157316;157317;157318;157319;157320;157321;157322;157323;157324;157325;157326;157327;157328;157329;157330;157331;157332;157333;157334;157335;157336;157337 157318 22 IGGDAATTVNNSTPDFGFGGQKR Unmodified 2309.1036 0.10363681 3690 Q92945 KHSRP Far upstream element-binding protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 30.63 30.212 3 0.0018369 32755 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 27.495 19.962 28246000 0 0 3968800 0 5552300 0 3041800 0 0 3670400 0 0 0 5058600 6954400 23475 3690 21451 197140;197141;197142;197143;197144;197145 157338;157339;157340;157341;157342 157339 5 IGGDAGTSLNSNDYGYGGQK Unmodified 1972.8763 0.87626263 3737 Q96AE4 FUBP1 Far upstream element-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.62 2 6 1 24 4 4 1 2 2 2 2 2 2 2 2 2 2 2 2 52.84 52.149 2;3 6.6595E-237 53875 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 284.04 269.78 3818500000 129430000 2262700000 3312500 60938000 61815000 55684000 65606000 66239000 59870000 112790000 163830000 272050000 84260000 142800000 277220000 23476 3737 21452 197146;197147;197148;197149;197150;197151;197152;197153;197154;197155;197156;197157;197158;197159;197160;197161;197162;197163;197164;197165;197166;197167;197168;197169;197170;197171;197172;197173;197174;197175;197176;197177;197178 157343;157344;157345;157346;157347;157348;157349;157350;157351;157352;157353;157354;157355;157356;157357;157358;157359;157360;157361;157362;157363;157364;157365;157366;157367 157351 23 IGGDLTAAVTK Unmodified 1044.5815 0.58152458 3120 Q7Z739 YTHDF3 YTH domain-containing family protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49.511 49.232 2 0.00025931 56100 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 91.584 57.411 1871200000 242520 280580000 0 84966000 62457000 94758000 140050000 104920000 129410000 162180000 193980000 138440000 145350000 146820000 187000000 23477 3120 21453 197179;197180;197181;197182;197183;197184;197185;197186;197187;197188;197189;197190;197191;197192 157368;157369;157370;157371;157372;157373;157374;157375;157376;157377;157378;157379;157380;157381;157382 157382 15 IGGDSGLSSR Unmodified 947.46722 0.46722311 2640 Q16875 PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 17.816 17.678 2 0.022774 16286 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.828 22.01 8210700 0 0 0 8210700 0 0 0 0 0 0 0 0 0 0 0 23478 2640 21454 197193;197194 157383;157384 157383 2 IGGDSGLSVR Unmodified 959.50361 0.50360861 433 O60825;P16118 PFKFB2;PFKFB1 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase;6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 1;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.752 33.935 2 0.00092144 37258 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 113.71 50.826 915070000 0 0 0 46217000 93651000 79371000 92708000 78724000 63195000 87174000 109700000 91511000 55261000 45038000 72525000 23479 433 21455 197195;197196;197197;197198;197199;197200;197201;197202;197203;197204;197205;197206 157385;157386;157387;157388;157389;157390;157391;157392;157393;157394;157395;157396;157397;157398;157399 157396 12 IGGDSGLSVRGK Unmodified 1144.62 0.62003536 433 O60825;P16118 PFKFB2;PFKFB1 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase;6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 1;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase yes no 0 0 1 By MS/MS By matching 2 0 2 1 1 28.877 24.514 3 0.001178 34339 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.309 57.636 101940000 100150000 0 1796700 0 0 0 0 0 0 0 0 0 0 0 0 23480 433 21456 197207;197208 157400;157401 157400 2 IGGGIDVPVPR Unmodified 1078.6135 0.61349341 3690 Q92945 KHSRP Far upstream element-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.982 68.062 2 2.641E-28 78318 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 176.6 145.92 1454100000 0 0 0 63815000 77552000 87357000 108870000 71367000 83681000 121670000 150840000 161590000 100900000 134160000 292260000 23481 3690 21457 197209;197210;197211;197212;197213;197214;197215;197216;197217;197218;197219;197220 157402;157403;157404;157405;157406;157407;157408;157409;157410;157411;157412;157413;157414;157415;157416;157417;157418;157419;157420;157421;157422;157423;157424;157425;157426;157427 157420 26 IGGGPGDAADVQR Unmodified 1211.5895 0.58946351 4854 Q9UBS0 RPS6KB2 Ribosomal protein S6 kinase beta-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.973 27.17 2 0.00028506 28709 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 82.171 52.698 142780000 0 0 0 10064000 8413800 12551000 9690300 7845100 10160000 13336000 13968000 17005000 13815000 11628000 14306000 23482 4854 21458 197221;197222;197223;197224;197225;197226;197227;197228;197229;197230;197231;197232 157428;157429;157430;157431;157432;157433;157434;157435;157436;157437 157435 9 IGGHGPTLK Unmodified 878.4974 0.49740102 2641 Q16881 TXNRD1 Thioredoxin reductase 1, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.5 0.5 2 2 2 1 1 21.304 17.345 2 0.0055955 21743 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 107.29 62.875 273540000 251860000 7889000 13787000 0 0 0 0 0 0 0 0 0 0 0 0 23483 2641 21459 197233;197234;197235;197236 157438;157439;157440 157440 0 IGGIFAFK Unmodified 851.49052 0.49052473 1136 P22307 SCP2 Non-specific lipid-transfer protein yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.566 77.624 2 0.02349 88996 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.294 39.309 68820000 0 0 0 4717100 3529600 7009300 6196200 5672700 2791200 5634600 5539400 7683600 3964700 4222100 11859000 23484 1136 21460 197237;197238;197239;197240;197241;197242;197243;197244;197245;197246;197247;197248 157441;157442;157443;157444 157441 4 IGGIGTVPVGR Unmodified 1024.6029 0.60292873 1960 P68104;Q5VTE0;Q05639 EEF1A1;EEF1A1P5;EEF1A2 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.76 2.86 5 1 32 2 2 2 5 3 2 4 3 4 1 2 1 2 2 3 57.494 57.085 2 1.7733E-05 62430 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 133.23 65.254 108550000000 26635000 3898400 4292000 6320100000 6158200000 10373000000 8230500000 8240900000 6594900000 9156700000 11290000000 12174000000 9212200000 8271800000 12496000000 23485 1960 21461 197249;197250;197251;197252;197253;197254;197255;197256;197257;197258;197259;197260;197261;197262;197263;197264;197265;197266;197267;197268;197269;197270;197271;197272;197273;197274;197275;197276;197277;197278;197279;197280;197281;197282;197283;197284;197285;197286 157445;157446;157447;157448;157449;157450;157451;157452;157453;157454;157455;157456;157457;157458;157459;157460;157461;157462;157463;157464;157465;157466;157467;157468;157469;157470;157471;157472;157473;157474;157475;157476;157477;157478;157479;157480;157481;157482;157483;157484;157485;157486;157487;157488;157489;157490;157491;157492;157493;157494;157495;157496;157497;157498;157499;157500;157501;157502;157503;157504;157505;157506;157507;157508;157509;157510;157511;157512;157513;157514;157515;157516;157517;157518;157519;157520;157521;157522;157523;157524;157525;157526;157527;157528 157468 82 IGGIGTVPVGRVETGVLK Unmodified 1751.0305 0.030518852 1960 P68104;Q5VTE0 EEF1A1;EEF1A1P5 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.7 2.91 4 1 25 2 2 1 2 2 2 2 2 2 2 2 3 2 2 2 76.701 75.861 2;3 7.9168E-30 87417 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 114.29 75.148 12168000000 1296400000 89180000 12637000 150390000 238460000 1167700000 556200000 706860000 1243400000 1108900000 1028800000 1005300000 618240000 744530000 2201300000 23486 1960 21462 197287;197288;197289;197290;197291;197292;197293;197294;197295;197296;197297;197298;197299;197300;197301;197302;197303;197304;197305;197306;197307;197308;197309;197310;197311;197312;197313;197314;197315;197316 157529;157530;157531;157532;157533;157534;157535;157536;157537;157538;157539;157540;157541;157542;157543;157544;157545;157546;157547;157548;157549;157550;157551;157552;157553;157554;157555;157556;157557 157545 24 IGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVK Oxidation (M) 3536.964 0.96402578 1960 P68104;Q5VTE0 EEF1A1;EEF1A1P5 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3 yes no 0 1 2 By MS/MS 2 0 1 1 95.874 87.744 4 4.2033E-19 113244 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.381 55.62 43266000 43266000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23487 1960 21463 197317 157558 157558 3146 1 IGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVK Unmodified 3520.9691 0.96911115 1960 P68104;Q5VTE0 EEF1A1;EEF1A1P5 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3 yes no 0 0 2 By MS/MS 2 0 2 2 97.176 89.045 4 8.1307E-05 114877 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 38.054 33.98 44625000 44625000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23488 1960 21463 197318;197319 157559;157560 157559 2 IGGISGIFK Unmodified 890.52255 0.52255314 4954 Q9UK59 DBR1 Lariat debranching enzyme yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 72.45 72.557 2 0.011394 83298 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 62.88 30.753 83256000 0 0 0 7256600 0 8302900 8382400 0 5900100 11432000 9139500 11622000 0 6507200 14714000 23489 4954 21464 197320;197321;197322;197323;197324;197325;197326;197327;197328 157561;157562;157563;157564;157565;157566 157566 6 IGGNEGIDVPIPR Unmodified 1335.7147 0.71466402 3737 Q96AE4 FUBP1 Far upstream element-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.607 74.672 2 5.2657E-13 85391 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 167.11 146.59 2023200000 0 0 0 74499000 84282000 104780000 125540000 94838000 90858000 171450000 220940000 274430000 129310000 211440000 440820000 23490 3737 21465 197329;197330;197331;197332;197333;197334;197335;197336;197337;197338;197339;197340 157567;157568;157569;157570;157571;157572;157573;157574;157575;157576;157577;157578 157570 12 IGGVTERMPTPVIK Unmodified 1496.8385 0.83848433 854 P07954 FH Fumarate hydratase, mitochondrial yes yes 0 0 1 By MS/MS 2 0 2 2 73.197 65.001 2;3 0.0025183 86281 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.042 32.701 302860000 302860000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23491 854 21466 197341;197342 157579;157580 157579 0 IGHGGTLDSAAR Unmodified 1153.584 0.5839842 3572 Q8WWH5 TRUB1 Probable tRNA pseudouridine synthase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 15.312 15.616 3 0.0024294 14618 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 44.847 32.634 120070000 0 0 0 0 0 0 0 7303500 5645400 14358000 21348000 16437000 15791000 14912000 24276000 23492 3572 21467 197343;197344;197345;197346;197347;197348;197349;197350 157581;157582;157583;157584;157585;157586 157582 6 IGHLLPEEQVYLNQQSGTIR Unmodified 2294.2019 0.20189429 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 0 0 By MS/MS 10 0 1 1 75.514 75.825 3 0.00070151 87066 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.164 35.625 9818200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9818200 23493 619 21468 197351 157587 157587 1 IGHPAPNFK Unmodified 979.52395 0.52395013 2131 Q06830 PRDX1 Peroxiredoxin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.25 3.75 6 1 13 3 2 2 1 1 1 1 1 1 2 1 1 1 1 1 27.761 26.426 2 0.00071604 36927 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.49 93.351 10418000000 4620200000 1740600000 1510300000 214620000 92329000 120530000 110150000 95267000 86683000 157490000 381480000 363360000 98087000 243890000 583080000 23494 2131 21469 197352;197353;197354;197355;197356;197357;197358;197359;197360;197361;197362;197363;197364;197365;197366;197367;197368;197369;197370;197371 157588;157589;157590;157591;157592;157593;157594;157595;157596;157597;157598;157599;157600;157601;157602;157603;157604;157605;157606;157607;157608;157609;157610;157611;157612;157613;157614;157615;157616;157617;157618;157619;157620;157621;157622;157623;157624 157597 37 IGIEEADSFFK Unmodified 1254.6132 0.61321864 3713 Q969F9 HPS3 Hermansky-Pudlak syndrome 3 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 82.93 81.56 2 5.2748E-05 98951 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 131.44 101.63 188310000 5145500 88674000 4454000 4616300 0 9892400 6630800 9854900 9296000 13077000 10274000 0 0 8334800 18061000 23495 3713 21470 197372;197373;197374;197375;197376;197377;197378;197379;197380;197381;197382;197383;197384 157625;157626;157627;157628;157629;157630;157631;157632;157633;157634;157635;157636;157637;157638;157639 157635 15 IGIEIIK Unmodified 784.50584 0.50584045 930 P10809 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68.802 67.557 2 0.023725 75781 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 84.244 4.7901 4834600000 420610000 486260000 419270000 190210000 188890000 300120000 261500000 261430000 231700000 343890000 349370000 342230000 304870000 265810000 468390000 23496 930 21471 197385;197386;197387;197388;197389;197390;197391;197392;197393;197394;197395;197396;197397;197398;197399;197400 157640;157641;157642;157643;157644;157645;157646;157647;157648;157649;157650;157651 157650 12 IGIFESPTGTGK Unmodified 1205.6292 0.62920306 37;3836 A8MPP1;Q92771;Q96FC9 DDX11L8;DDX12P;DDX11 Putative ATP-dependent RNA helicase DDX11-like protein 8;Putative ATP-dependent RNA helicase DDX12;Probable ATP-dependent RNA helicase DDX11 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 63.508 62.167 2 3.3766E-05 76127 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 125.68 111.54 247720000 12604000 136450000 6931100 4869700 5918500 7913200 8229000 7340100 5562500 9582800 8199900 8814100 7622000 5270500 12406000 23497 37;3836 21472 197401;197402;197403;197404;197405;197406;197407;197408;197409;197410;197411;197412;197413;197414;197415;197416 157652;157653;157654;157655;157656;157657;157658;157659;157660;157661;157662;157663;157664;157665 157658 13 IGIFGQDEDVTSK Unmodified 1407.6882 0.6881745 1041 P16615 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 66.968 67.041 2 0.00054263 76671 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 78.342 60.874 183350000 0 0 0 13980000 14414000 15432000 11617000 13729000 9943600 19209000 22059000 27288000 15107000 0 20572000 23498 1041 21473 197417;197418;197419;197420;197421;197422;197423;197424;197425;197426;197427 157666;157667;157668;157669;157670;157671;157672;157673 157669 7 IGIFPISYVEFNSAAK Unmodified 1754.9243 0.92432245 3112 Q7Z6J0 SH3RF1 E3 ubiquitin-protein ligase SH3RF1 yes yes 0 0 0 By MS/MS 10 0 1 1 94.739 94.858 2 0.042533 110244 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 28.327 20.947 1531400 0 0 0 0 0 0 0 0 0 1531400 0 0 0 0 0 23499 3112 21474 197428 157674 157674 1 IGIGELITR Unmodified 970.58113 0.58113065 465 O75153 CLUH Clustered mitochondria protein homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.049 76.111 2 0.0082186 87176 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.256 36.898 140810000 0 0 0 3927100 3913400 10399000 6378300 7755500 5028700 9725300 13804000 15120000 6831000 14551000 43379000 23500 465 21475 197429;197430;197431;197432;197433;197434;197435;197436;197437;197438;197439;197440 157675;157676;157677;157678;157679;157680;157681;157682;157683;157684;157685;157686 157678 12 IGIIGGTGLDDPEILEGRTEK Unmodified 2182.1481 0.14812739 2237 Q13126 MTAP S-methyl-5'-thioadenosine phosphorylase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 5.12 3.79 4 1 3 3 1 1 1 1 1 84.771 81.446 3;4 8.3302E-12 94896 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.504 74.401 699730000 343010000 238070000 75946000 0 0 0 0 0 0 0 3916900 4106400 0 0 34677000 23501 2237 21476 197441;197442;197443;197444;197445;197446;197447;197448 157687;157688;157689;157690;157691 157689 5 IGILHENFQTLK Unmodified 1411.7823 0.78234966 5282 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71.361 70.507 3 0.00032806 93625 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.301 75.337 275840000 78882000 26222000 0 5055300 4750200 16614000 9588900 12786000 12155000 11554000 16696000 21044000 13034000 11885000 35571000 23502 5282 21477 197449;197450;197451;197452;197453;197454;197455;197456;197457;197458;197459;197460;197461;197462 157692;157693;157694;157695;157696;157697;157698;157699;157700;157701;157702;157703;157704 157697 12 IGISDISSLSEK Unmodified 1247.6609 0.66089712 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 74.235 73.553 2 4.8599E-14 87690 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 156.48 130.91 631610000 0 251920000 3859000 17704000 30651000 28045000 27411000 24801000 24246000 40836000 36629000 38111000 33667000 32893000 40830000 23503 2804 21478 197463;197464;197465;197466;197467;197468;197469;197470;197471;197472;197473;197474;197475;197476;197477 157705;157706;157707;157708;157709;157710;157711;157712;157713;157714;157715;157716;157717;157718;157719;157720;157721 157713 17 IGITLQPVALHR Unmodified 1316.7929 0.79285476 5000 Q9ULM3 YEATS2 YEATS domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.209 75.268 3 0.0040565 86875 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 43.604 37.228 63679000 0 0 0 1620900 3489300 10167000 2122100 4089000 3304700 6803800 6200400 11632000 3142000 2972900 8134500 23504 5000 21479 197478;197479;197480;197481;197482;197483;197484;197485;197486;197487;197488;197489 157722;157723;157724 157723 3 IGITNHDEYSLVR Unmodified 1515.7682 0.76815616 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 1 2 1 2 1 2 2 1 2 2 2 58.489 58.654 2;3 0.00012889 66709 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 68.83 56.275 320530000 0 0 0 9156100 8113200 38101000 17104000 20877000 14741000 26717000 30238000 29239000 24399000 28924000 72924000 23505 5187 21480 197490;197491;197492;197493;197494;197495;197496;197497;197498;197499;197500;197501;197502;197503;197504;197505;197506;197507;197508 157725;157726;157727;157728;157729;157730;157731;157732;157733;157734;157735;157736 157725 9 IGIVGLPNVGK Unmodified 1065.6546 0.65462995 4636 Q9NTK5 OLA1 Obg-like ATPase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 78.336 77.207 2 0.00045997 94163 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 103.83 75.659 1544700000 550760000 373170000 67776000 23253000 21120000 64179000 31634000 28998000 20440000 65514000 52625000 67737000 31654000 43295000 102540000 23506 4636 21481 197509;197510;197511;197512;197513;197514;197515;197516;197517;197518;197519;197520;197521;197522;197523;197524 157737;157738;157739;157740;157741;157742;157743;157744;157745;157746;157747;157748;157749;157750;157751;157752 157747 16 IGKPAPDFK Unmodified 971.54402 0.54401687 1317 P32119 PRDX2 Peroxiredoxin-2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28.25 27.467 2 0.018011 37790 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.8 63.227 887840000 387990000 57913000 73459000 37991000 12091000 4012900 17175000 25693000 5781700 17671000 54641000 51361000 16854000 40922000 84289000 23507 1317 21482 197525;197526;197527;197528;197529;197530;197531;197532;197533;197534;197535;197536;197537;197538;197539 157753;157754;157755 157753 0 IGKPHTVPCK Unmodified 1135.6172 0.61719858 1027 P15880 RPS2 40S ribosomal protein S2 yes yes 0 0 1 By MS/MS 2 0 1 1 15.861 11.749 2 0.030012 17267 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.308 40.882 9810700 9810700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23508 1027 21483 197540 157756 157756 1 IGLAEEIR Unmodified 899.50763 0.50763136 2231 Q13085 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.712 52.856 2 0.025292 59780 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 58.815 6.4123 174300000 0 0 0 7634500 6110700 17367000 8367100 8362400 7164900 16569000 19227000 30102000 14343000 14610000 24442000 23509 2231 21484 197541;197542;197543;197544;197545;197546;197547;197548;197549;197550;197551;197552 157757 157757 1 IGLDTEGETCGNAEK Unmodified 1592.6988 0.69881554 928 P10746 UROS Uroporphyrinogen-III synthase yes yes 0 0 0 By MS/MS 2 0 1 1 40.339 35.287 2 1.2872E-25 46053 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 135.1 124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23510 928 21485 197553 157758 157758 1 IGLETSLR Unmodified 887.50763 0.50763136 5077 Q9Y230 RUVBL2 RuvB-like 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.671 51.819 2 0.0099856 57286 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.119 45.87 493700000 0 0 0 24507000 26833000 29653000 36232000 43413000 18019000 45938000 57697000 57656000 47798000 46097000 59855000 23511 5077 21486 197554;197555;197556;197557;197558;197559;197560;197561;197562;197563;197564;197565 157759;157760;157761;157762;157763;157764 157760 6 IGLETVGVK Unmodified 914.54368 0.54368251 2641 Q16881 TXNRD1 Thioredoxin reductase 1, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.8 3.12 3 1 1 1 2 1 1 59.045 54.627 2 0.0093318 67724 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 109.01 24.769 5235000000 248460000 4548100000 319080000 0 0 0 0 0 0 0 0 0 0 0 119390000 23512 2641 21487 197566;197567;197568;197569;197570 157765;157766;157767;157768 157767 2 IGLFGGAGVGK Unmodified 974.55492 0.5549159 823 P06576 ATP5B ATP synthase subunit beta, mitochondrial yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68.562 67.537 2 0.0080542 76895 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 52.482 26.543 206660000 21367000 9198200 1669400 29823000 10916000 13077000 12494000 12955000 11228000 13315000 14415000 14426000 10603000 12132000 19035000 23513 823 21488 197571;197572;197573;197574;197575;197576;197577;197578;197579;197580;197581;197582;197583;197584;197585 157769;157770;157771;157772;157773;157774;157775 157773 7 IGLFYMDNDLITR Oxidation (M) 1585.781 0.78102903 2471 Q15008 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 84.587 84.636 2 0.00060685 98030 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 68.069 50.205 31575000 0 0 0 0 2433900 4089700 0 0 0 8324100 7333700 9393200 0 0 0 23514 2471 21489 197586;197587;197588;197589;197590 157776;157777;157778;157779;157780 157777 4070 5 IGLGGRGGSGGSYGR Unmodified 1349.68 0.68000985 1354 P35527;CON__P35527 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 1 2 2 2 2 2 2 2 2 26.421 26.628 2;3 0.00011648 28211 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 83.692 60.015 + 4964500000 0 0 0 512840000 220130000 243550000 21442000 964850000 190570000 230910000 308550000 1565800000 439810000 151940000 114160000 23515 1354 21490 197591;197592;197593;197594;197595;197596;197597;197598;197599;197600;197601;197602;197603;197604;197605;197606;197607;197608;197609;197610;197611;197612;197613 157781;157782;157783;157784;157785;157786;157787;157788;157789;157790;157791;157792;157793;157794;157795 157785 5 IGLGGRGGSGGSYGRGSR Unmodified 1649.8346 0.83461301 1354 P35527;CON__P35527 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 20.619 20.878 4 0.028405 20638 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 27.714 8.8819 + 775560000 0 0 0 0 0 14835000 10714000 10466000 15886000 4809800 0 671370000 13524000 7362700 26597000 23516 1354 21491 197614;197615;197616;197617;197618;197619;197620;197621;197622 157796 157796 1 IGLINDMVR Unmodified 1029.5641 0.56410038 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 72.493 72.702 2 0.0034522 82710 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 94.302 30.823 74379000 0 0 0 0 0 0 0 6631600 3900100 9380900 7188900 11370000 5800000 10310000 19797000 23517 2378 21492 197623;197624;197625;197626;197627;197628;197629;197630;197631;197632;197633 157797;157798;157799;157800;157801;157802;157803;157804;157805;157806;157807 157804 11 IGLINDMVR Oxidation (M) 1045.559 0.559015 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 53.568 53.886 2 0.017065 60277 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 50.04 22.158 67019000 0 0 0 0 0 5374900 0 0 5481500 10320000 0 20499000 0 10812000 14531000 23518 2378 21492 197634;197635;197636;197637;197638;197639 157808;157809 157808 3865 2 IGLIQFCLSAPK Unmodified 1345.7428 0.74279303 1642 P50991 CCT4 T-complex protein 1 subunit delta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.64 2.9 1 1 9 1 1 1 1 1 1 1 1 1 1 1 88.62 87.671 2 2.748E-05 101840 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 111.65 111.65 74500000 20433000 2435900 0 0 1666900 4744400 0 2187600 3984600 5825500 3364100 6964300 2169500 0 20724000 23519 1642 21493 197640;197641;197642;197643;197644;197645;197646;197647;197648;197649;197650 157810;157811;157812;157813;157814;157815;157816;157817;157818;157819;157820 157810 9 IGLIQGNR Unmodified 869.5083 0.50830006 861 P08237 PFKM ATP-dependent 6-phosphofructokinase, muscle type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.694 37.875 2 0.0061006 42832 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 122.15 90.041 1612500000 0 0 0 76277000 94720000 109820000 112420000 150320000 75888000 134060000 161100000 224940000 155510000 109860000 207650000 23520 861 21494 197651;197652;197653;197654;197655;197656;197657;197658;197659;197660;197661;197662 157821;157822;157823;157824;157825;157826;157827;157828;157829;157830;157831;157832;157833;157834;157835;157836 157833 14 IGLLDPR Unmodified 782.46504 0.46503826 2539 Q15459 SF3A1 Splicing factor 3A subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 55.662 55.937 2 0.023406 63894 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 86.866 53.128 896120000 0 0 0 0 0 66927000 76453000 61076000 54484000 78722000 102990000 131080000 78945000 94082000 151370000 23521 2539 21495 197663;197664;197665;197666;197667;197668;197669;197670;197671;197672 157837;157838 157837 2 IGLLSASSK Unmodified 874.51238 0.51238239 2713 Q56NI9 ESCO2 N-acetyltransferase ESCO2 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 44.78 44.962 2 0.0031256 49411 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 91.069 32.875 54264000 0 0 0 0 4207500 3555200 0 0 0 13798000 14205000 18499000 0 0 0 23522 2713 21496 197673;197674;197675;197676;197677 157839;157840;157841;157842;157843 157842 5 IGLPHSIK Unmodified 863.52289 0.52288749 2410 Q14498 RBM39 RNA-binding protein 39 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.377 41.555 2 0.013245 47000 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 72.789 42.982 248240000 0 0 0 12003000 10937000 18253000 17383000 13558000 16375000 27019000 22683000 32908000 20680000 24082000 32363000 23523 2410 21497 197678;197679;197680;197681;197682;197683;197684;197685;197686;197687;197688;197689 157844;157845;157846;157847;157848;157849;157850;157851 157851 8 IGLVEDLNK Unmodified 999.56006 0.56006086 2891 Q6KC79 NIPBL Nipped-B-like protein yes yes 0 0 0 By MS/MS 2 0 1 1 64.406 58.499 2 0.025308 74997 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102 53.887 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23524 2891 21498 197690 157852 157852 1 IGNCPFSQR Unmodified 1077.5026 0.50256276 140 O00299 CLIC1 Chloride intracellular channel protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 31.848 32.558 2 0.032106 34558 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.383 39.233 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23525 140 21499 197691 157853 157853 1 IGNEGLAADLTDDPDTEEALK Unmodified 2186.0227 0.0226521 2225 Q13033 STRN3 Striatin-3 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS 8.64 2.9 1 1 9 2 1 2 1 1 1 1 1 1 77.866 77.123 2 2.9335E-119 94051 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 195.6 168.98 144460000 0 107910000 0 0 3185000 3573300 3814400 3296300 3497000 6328000 0 0 4633000 0 8221500 23526 2225 21500 197692;197693;197694;197695;197696;197697;197698;197699;197700;197701;197702 157854;157855;157856;157857;157858;157859 157857 6 IGNFIVK Unmodified 789.47487 0.47487467 2045 Q00796 SORD Sorbitol dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 48.807 42.9 2 0.034105 59387 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.306 3.0437 12507000 9821100 0 2685600 0 0 0 0 0 0 0 0 0 0 0 0 23527 2045 21501 197703;197704 157860 157860 1 IGNFLNYGSHTGDADGFK Unmodified 1911.8751 0.87514042 2646 Q27J81 INF2 Inverted formin-2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 71.09 71.293 3 0.0010521 81299 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.543 41.114 26704000 0 0 0 0 0 3752700 0 2027200 0 2547400 0 5253000 0 2525100 10599000 23528 2646 21502 197705;197706;197707;197708;197709;197710 157861;157862 157861 2 IGNFSTDIK Unmodified 993.51311 0.51311067 985 P13796 LCP1 Plastin-2 yes yes 0 0 0 By MS/MS 10 0 1 1 49.915 49.296 2 0.0080246 56273 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 70.816 20.113 8037800 0 0 0 8037800 0 0 0 0 0 0 0 0 0 0 0 23529 985 21503 197711 157863 157863 1 IGNLLVPNENYCK Unmodified 1532.7657 0.76571331 1569 P49366 DHPS Deoxyhypusine synthase yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 68.138 68.484 2 0.014307 77895 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.883 29.017 22863000 0 0 0 0 0 0 0 0 0 0 5402200 4856800 0 4241900 8362300 23530 1569 21504 197712;197713;197714;197715 157864;157865 157864 2 IGNPVPYNEGLGQPQVAPPAPAASPAASSR Unmodified 2912.4781 0.47806915 1221 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 76.865 77.015 3 8.2735E-05 88973 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 27.905 16.382 41964000 0 0 0 0 0 4353100 6440900 3040800 0 3603700 4638400 4669500 2700900 4503900 8013300 23531 1221 21505 197716;197717;197718;197719;197720;197721;197722;197723;197724 157866;157867;157868;157869 157868 4 IGNTEDGAPHK Unmodified 1137.5415 0.54145068 4287 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 7.3935 7.5398 3 0.0078754 5641 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 37.968 26.755 19004000 0 0 0 0 719250 2060500 467490 565400 1948500 1346900 5053600 0 1993000 2125500 2723400 23532 4287 21506 197725;197726;197727;197728;197729;197730;197731;197732;197733;197734 157870 157870 1 IGNTEDGAPHKEDEPSVGQVAR Unmodified 2305.0935 0.093466053 4287 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 2 2 1 1 1 2 1 1 1 2 33.727 33.985 3;4 1.0276E-71 36964 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 125.88 117.28 219520000 0 0 0 0 11035000 15842000 18661000 14478000 5676200 17730000 48815000 27535000 15457000 17156000 27133000 23533 4287 21507 197735;197736;197737;197738;197739;197740;197741;197742;197743;197744;197745;197746;197747;197748;197749 157871;157872;157873;157874;157875;157876;157877;157878;157879;157880;157881;157882;157883 157878 13 IGNTGGMLDNILASK Oxidation (M) 1518.7712 0.77119262 1714 P53396 ACLY ATP-citrate synthase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.08 4 1 21 2 2 1 1 1 2 2 2 2 1 2 2 2 2 2 71.108 70.143 2 7.8061E-169 81086 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 220.4 184.69 8277600000 253230000 317190000 26247000 103660000 253070000 488040000 1752400000 1593600000 1840600000 188350000 554600000 773190000 21703000 38676000 72918000 23534 1714 21508 197750;197751;197752;197753;197754;197755;197756;197757;197758;197759;197760;197761;197762;197763;197764;197765;197766;197767;197768;197769;197770;197771;197772;197773;197774;197775 157884;157885;157886;157887;157888;157889;157890;157891;157892;157893;157894;157895;157896;157897;157898;157899;157900;157901;157902;157903;157904;157905;157906;157907;157908;157909;157910;157911;157912 157885 2777 27 IGNTGGMLDNILASK Unmodified 1502.7763 0.776278 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 82.845 81.729 2 1.6902E-15 99602 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 139.78 120.02 3538600000 383040000 481110000 21473000 25424000 122020000 133890000 303570000 748920000 661610000 141220000 174650000 257730000 3954600 13342000 66672000 23535 1714 21508 197776;197777;197778;197779;197780;197781;197782;197783;197784;197785;197786;197787;197788;197789;197790;197791 157913;157914;157915;157916;157917;157918;157919;157920;157921;157922;157923;157924;157925;157926;157927;157928 157923 16 IGPIATPDYIQNAPGLPK Unmodified 1864.0094 0.0094490594 4586 Q9NR19 ACSS2 Acetyl-coenzyme A synthetase, cytoplasmic yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 86.608 82.592 2 0.0016218 102615 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 57.003 50.271 84697000 0 84697000 0 0 0 0 0 0 0 0 0 0 0 0 0 23536 4586 21509 197792;197793 157929;157930;157931 157929 3 IGPILDNSTLQSEVK Unmodified 1612.8672 0.8672015 1271 P30153 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 76.161 75.02 2 1.9193E-56 92952 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 205.07 192.11 1827200000 10894000 1615400000 9491500 7060500 7305100 35943000 8223500 7194500 15624000 13845000 15935000 18553000 9461800 16625000 35646000 23537 1271 21510 197794;197795;197796;197797;197798;197799;197800;197801;197802;197803;197804;197805;197806;197807;197808;197809 157932;157933;157934;157935;157936;157937;157938;157939;157940;157941;157942;157943;157944;157945 157935 13 IGPILDNSTLQSEVKPILEK Unmodified 2193.2256 0.22564942 1271 P30153 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.8 4 1 8 4 1 1 1 1 1 1 1 1 1 87.278 85.759 3 6.0314E-28 98243 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.39 91.895 679800000 0 425470000 38831000 2314600 0 8022900 3176800 7608200 0 45408000 18723000 0 0 8671700 121570000 23538 1271 21511 197810;197811;197812;197813;197814;197815;197816;197817;197818;197819;197820;197821;197822 157946;157947;157948;157949;157950;157951;157952;157953;157954;157955;157956;157957;157958;157959;157960;157961 157953 16 IGPILDTNALQGEVK Unmodified 1566.8617 0.86172219 1272 P30154 PPP2R1B Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 80.257 79.465 2 0.00015397 98298 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.02 107.33 164810000 0 134640000 0 0 0 7591100 1314500 0 2499600 5565800 0 0 3442600 4414200 5345300 23539 1272 21512 197823;197824;197825;197826;197827;197828;197829;197830;197831 157962;157963;157964;157965;157966;157967;157968 157964 7 IGPILDTNALQGEVKPVLQK Unmodified 2132.2205 0.22050447 1272 P30154 PPP2R1B Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 84.18 82.783 3 6.0563E-15 95828 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.453 85.091 63113000 7215000 0 2162300 0 0 0 0 2902100 0 10235000 9001300 0 0 3907000 27690000 23540 1272 21513 197832;197833;197834;197835;197836;197837;197838 157969;157970;157971;157972;157973;157974 157970 6 IGPITPLEFYR Unmodified 1304.7129 0.71287311 2348 Q13867 BLMH Bleomycin hydrolase yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 2 1 1 1 1 1 1 86.55 86.628 2 0.00059101 100532 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 80.231 59.531 283810000 0 0 0 57952000 8207700 20539000 8764000 25899000 20164000 27401000 15958000 37168000 10749000 14453000 36551000 23541 2348 21514 197839;197840;197841;197842;197843;197844;197845;197846;197847;197848;197849;197850;197851 157975;157976;157977;157978;157979;157980;157981;157982;157983;157984;157985 157983 11 IGPLGLSPK Unmodified 880.5382 0.53820321 1266 P30050 RPL12 60S ribosomal protein L12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 60.421 59.247 2 0.0036824 68379 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 95.741 56.095 2158500000 396310000 275570000 0 74499000 90981000 86713000 100440000 85791000 85286000 113770000 151380000 176990000 193610000 139090000 188070000 23542 1266 21515 197852;197853;197854;197855;197856;197857;197858;197859;197860;197861;197862;197863;197864;197865;197866 157986;157987;157988;157989;157990;157991;157992;157993;157994;157995;157996;157997;157998;157999;158000;158001;158002 158001 14 IGPPAVEAAVTPPAPPQPTPR Unmodified 2062.1211 0.12112477 2070 Q02086 SP2 Transcription factor Sp2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.5 77.558 3 0.00039597 89247 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 43.164 38.186 112570000 0 0 0 6534000 7630700 6431000 9182500 6324300 6040900 12296000 10766000 11301000 9409800 9606000 17044000 23543 2070 21516 197867;197868;197869;197870;197871;197872;197873;197874;197875;197876;197877;197878 158003;158004;158005;158006;158007;158008;158009;158010;158011;158012;158013;158014;158015;158016 158005 11 IGPYQPNVPVGIDYVIPK Unmodified 1968.072 0.072049316 1473 P43243 MATR3 Matrin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 25 2 2 2 2 2 2 2 2 2 2 2 3 89.537 89.61 2;3 2.2322E-39 104144 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 160.48 148.31 1695100000 0 0 0 11555000 68652000 83447000 51593000 158410000 91515000 265840000 166380000 196820000 64968000 114060000 421870000 23544 1473 21517 197879;197880;197881;197882;197883;197884;197885;197886;197887;197888;197889;197890;197891;197892;197893;197894;197895;197896;197897;197898;197899;197900;197901;197902;197903 158017;158018;158019;158020;158021;158022;158023;158024;158025;158026;158027;158028;158029;158030;158031;158032;158033;158034;158035;158036;158037;158038;158039;158040;158041 158029 18 IGQETVQDIVYR Unmodified 1419.7358 0.73579339 3869 Q96HR3 MED30 Mediator of RNA polymerase II transcription subunit 30 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 66.135 66.358 2 0.00024873 75824 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 83.499 52.077 79616000 0 0 0 0 0 0 0 0 0 32340000 47276000 0 0 0 0 23545 3869 21518 197904;197905 158042 158042 1 IGQFVFAR Unmodified 936.51814 0.51813647 4607 Q9NRN7 AASDHPPT L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 67.505 67.656 2 0.014031 77559 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 71.141 52.762 65226000 0 0 0 0 5036500 10412000 4864700 4261900 3678800 6023600 6365700 8765200 3003500 3614000 9200200 23546 4607 21519 197906;197907;197908;197909;197910;197911;197912;197913;197914;197915;197916 158043;158044;158045 158044 3 IGQGASGTVFTATDVALGQEVAIK Unmodified 2332.2274 0.22744034 2248 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.18 0.386 9 2 2 6 3 91.285 87.035 2;3 1.8383E-201 107718 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 293.2 273.07 411810000 34073000 331730000 46001000 0 0 0 0 0 0 0 0 0 0 0 0 23547 2248 21520 197917;197918;197919;197920;197921;197922;197923;197924;197925;197926;197927 158046;158047;158048;158049;158050;158051;158052;158053;158054;158055;158056;158057 158048 11 IGQGTFGEVFK Unmodified 1181.6081 0.60807369 1637 P50750 CDK9 Cyclin-dependent kinase 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 72.239 70.935 2 0.00026373 81925 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 91.867 69.127 529410000 87864000 91326000 28972000 0 22725000 32976000 28241000 32147000 28195000 44905000 33468000 0 25903000 22758000 49930000 23548 1637 21521 197928;197929;197930;197931;197932;197933;197934;197935;197936;197937;197938;197939;197940;197941 158058;158059;158060;158061;158062;158063;158064;158065;158066;158067;158068;158069;158070 158070 11 IGQGYLIK Unmodified 890.52255 0.52255314 1402 P39023 RPL3 60S ribosomal protein L3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.96 2.69 3 20 1 1 1 2 2 1 2 1 1 2 2 1 2 2 2 48.927 48.268 2 0.00046967 55491 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 151.17 55.216 1496700000 203770000 111240000 39373000 67464000 63989000 55106000 76141000 60783000 56896000 108330000 104290000 110280000 169480000 123750000 145860000 23549 1402 21522 197942;197943;197944;197945;197946;197947;197948;197949;197950;197951;197952;197953;197954;197955;197956;197957;197958;197959;197960;197961;197962;197963;197964 158071;158072;158073;158074;158075;158076;158077;158078;158079;158080;158081;158082;158083;158084 158084 11 IGQILLTK Unmodified 884.5695 0.56950333 2433 Q14686 NCOA6 Nuclear receptor coactivator 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57.362 56.267 2 0.0060988 62464 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 103.74 62.237 142180000 17837000 8468500 4084600 7310500 6855700 6714500 8623200 8996700 6768400 11970000 8993600 12069000 10422000 11894000 11170000 23550 2433 21523 197965;197966;197967;197968;197969;197970;197971;197972;197973;197974;197975;197976;197977;197978;197979 158085;158086;158087;158088;158089;158090;158091;158092;158093;158094;158095;158096;158097;158098;158099;158100 158095 16 IGQLEEQLEQEAK Unmodified 1513.7624 0.76240208 1357 P35580 MYH10 Myosin-10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 63.991 64.125 2 0.002297 73352 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 68.551 53.286 4216900 0 0 0 0 0 0 4216900 0 0 0 0 0 0 0 0 23551 1357 21524 197980;197981;197982;197983;197984 158101;158102;158103;158104;158105 158102 5 IGQLFFGVPPK Unmodified 1201.6859 0.68593008 3051 Q7L5D6 GET4 Golgi to ER traffic protein 4 homolog yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 83.26 83.403 2 0.025628 96055 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 49.418 25.388 36038000 0 0 0 0 0 0 0 0 5430500 7020700 4615800 0 5846100 5696400 7428600 23552 3051 21525 197985;197986;197987;197988;197989;197990 158106 158106 1 IGQLYMISK Unmodified 1051.5736 0.57360243 4964 Q9UKF7 PITPNC1 Cytoplasmic phosphatidylinositol transfer protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 72.79 64.569 2 0.043029 85695 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.709 72.8 12100000 12100000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23553 4964 21526 197991 158107 158107 0 IGQQNEVR Unmodified 942.48829 0.4882929 1656;1655 P51532;P51531 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 no no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 9.9981 10.133 2 0.0043249 7182 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 111.82 63.967 247380000 0 0 0 16453000 8098500 19158000 12087000 10817000 10005000 25297000 26523000 39106000 23518000 21342000 34973000 23554 1656;1655 21527 197992;197993;197994;197995;197996;197997;197998;197999;198000;198001;198002;198003 158108;158109;158110;158111;158112;158113;158114;158115;158116;158117 158113 4 IGQQPQQPGAPPQQDYTK Unmodified 1979.9701 0.97010344 3690 Q92945 KHSRP Far upstream element-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.36 2.17 2 23 1 1 2 2 2 2 2 2 2 2 2 2 2 1 38.459 38.132 2;3 1.7123E-19 42075 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 131.06 108.53 1037900000 22494000 41659000 0 50917000 63546000 57368000 66205000 64087000 50658000 91275000 127700000 131430000 77359000 83392000 109830000 23555 3690 21528 198004;198005;198006;198007;198008;198009;198010;198011;198012;198013;198014;198015;198016;198017;198018;198019;198020;198021;198022;198023;198024;198025;198026;198027;198028 158118;158119;158120;158121;158122;158123;158124;158125;158126;158127;158128;158129;158130;158131;158132;158133;158134;158135 158133 16 IGQQVDREPGDVATPPR Unmodified 1833.9333 0.933324 5241 Q9Y5N6 ORC6 Origin recognition complex subunit 6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.426 39.606 3 5.1411E-46 43547 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 154.39 136.53 301520000 0 0 0 16124000 23050000 20962000 18774000 17870000 22008000 34027000 33660000 55072000 21336000 16128000 22512000 23556 5241 21529 198029;198030;198031;198032;198033;198034;198035;198036;198037;198038;198039;198040 158136;158137;158138;158139;158140;158141;158142;158143;158144;158145;158146 158144 11 IGQQVDREPGDVATPPRK Unmodified 1962.0283 0.028287021 5241 Q9Y5N6 ORC6 Origin recognition complex subunit 6 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.69 1.54 1 25 1 3 2 2 2 2 2 2 2 2 2 2 2 32.372 32.278 3;4 3.8246E-47 35577 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 141.13 113.36 2518800000 11199000 0 0 140730000 161330000 193870000 187170000 227850000 171320000 218660000 263740000 314250000 244020000 136690000 247980000 23557 5241 21530 198041;198042;198043;198044;198045;198046;198047;198048;198049;198050;198051;198052;198053;198054;198055;198056;198057;198058;198059;198060;198061;198062;198063;198064;198065;198066 158147;158148;158149;158150;158151;158152;158153;158154;158155;158156;158157;158158;158159;158160;158161;158162;158163;158164;158165;158166;158167;158168;158169;158170;158171 158171 15 IGRFVVQNVSAQK Unmodified 1444.815 0.81504677 3633 Q92598 HSPH1 Heat shock protein 105 kDa yes yes 0 0 1 By MS/MS 2 0 1 1 57.671 49.491 3 0.0010102 67428 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.528 57.374 21631000 21631000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23558 3633 21531 198067 158172 158172 1 IGRIEDVTPIPSDSTR Unmodified 1754.9163 0.91627696 1883 P62263 RPS14 40S ribosomal protein S14 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.938 60.045 3 4.4652E-05 68386 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 76.151 59.407 1091400000 0 0 0 45669000 48184000 67256000 64065000 76370000 61079000 85347000 117340000 148480000 92771000 86401000 198450000 23559 1883 21532 198068;198069;198070;198071;198072;198073;198074;198075;198076;198077;198078;198079 158173;158174;158175;158176;158177;158178;158179;158180;158181;158182;158183 158178 9 IGRNGTLTFGDVDTSDEK Unmodified 1923.9174 0.91739917 2958 Q6PJG2 ELMSAN1 ELM2 and SANT domain-containing protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 65.757 57.469 3 0.00069007 77214 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.616 46.177 13586000 13586000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23560 2958 21533 198080 158184 158184 1 IGSCTQQDVELHVQK Unmodified 1740.8465 0.84648283 1009 P14868 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.83 3.76 3 2 7 1 3 1 1 1 1 1 1 1 1 43.607 41.283 3 9.153E-24 51037 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 102.28 92.489 638710000 17407000 514820000 24532000 9175500 5282500 0 0 0 0 0 12771000 15341000 0 14631000 24754000 23561 1009 21534 198081;198082;198083;198084;198085;198086;198087;198088;198089;198090;198091;198092 158185;158186;158187;158188;158189;158190;158191;158192;158193;158194;158195;158196;158197;158198;158199 158189 15 IGSENPSDVFR Unmodified 1219.5833 0.5833155 3699 Q92995 USP13 Ubiquitin carboxyl-terminal hydrolase 13 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 52.566 52.882 2 0.00017598 58792 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 108.15 80.52 45487000 0 0 0 0 0 16239000 0 0 0 0 0 0 0 9714200 19534000 23562 3699 21535 198093;198094;198095 158200;158201 158200 2 IGSFGPQEDLLFLR Unmodified 1590.8406 0.84059282 2231 Q13085 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 91.932 92.065 2 0.00023201 106910 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 77.379 59.515 15090000 0 0 0 0 0 1721300 0 771330 833530 2747300 1412900 1300200 588890 851440 4862800 23563 2231 21536 198096;198097;198098;198099;198100;198101;198102;198103;198104 158202;158203;158204;158205 158202 4 IGSFTIQNVFPQSDGDSSK Unmodified 2025.9643 0.96434936 686 O95757 HSPA4L Heat shock 70 kDa protein 4L yes yes 0 0 0 By MS/MS 10 0 1 1 83.843 84.034 2 0.00068957 96962 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.681 50.626 10116000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10116000 23564 686 21537 198105 158206 158206 1 IGSGEFGSVFK Unmodified 1126.5659 0.56587452 1275 P30291 WEE1 Wee1-like protein kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 71.169 69.91 2 0.0084056 91192 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.847 27.965 50710000 9443900 0 6393300 3090500 4350800 4782200 4533100 4429900 3976800 0 0 9709700 0 0 0 23565 1275 21538 198106;198107;198108;198109;198110;198111;198112;198113;198114 158207;158208;158209;158210;158211;158212 158208 3 IGSGSFGTVYK Unmodified 1114.5659 0.56587452 769;1011 P04049;P15056 RAF1;BRAF RAF proto-oncogene serine/threonine-protein kinase;Serine/threonine-protein kinase B-raf no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 49.445 49.459 2 0.00057718 56162 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 80.688 55.598 109500000 0 0 0 10449000 9902300 17633000 14050000 22148000 0 0 0 16015000 0 19303000 0 23566 769;1011 21539 198115;198116;198117;198118;198119;198120;198121 158213;158214;158215;158216;158217;158218 158213 4 IGSGYDNVDIK Unmodified 1179.5772 0.57716749 1786 P56545 CTBP2 C-terminal-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 45.118 45.287 2 0.0072376 50636 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 54.539 17.009 69515000 0 0 0 0 5221000 8546700 7029000 0 4104500 8293900 9207800 0 0 11005000 16107000 23567 1786 21540 198122;198123;198124;198125;198126;198127;198128;198129 158219;158220;158221;158222 158221 4 IGSISRQSSLSEK Unmodified 1390.7416 0.74160705 3101 Q7Z4S6 KIF21A Kinesin-like protein KIF21A yes yes 0 0 1 By MS/MS 2 0 1 1 32.963 26.927 3 0.00072415 37746 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.622 48.566 24082000 24082000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23568 3101 21541 198130 158223;158224 158224 2 IGSLASGNVR Unmodified 972.53524 0.53524309 4371 Q9H2P0 ADNP Activity-dependent neuroprotector homeobox protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 29.56 29.727 2 0.0055193 31628 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 68.625 25.379 73186000 0 0 0 5932200 4347600 5357800 7791800 4864000 4432900 7548900 0 7116900 10520000 7063600 8210400 23569 4371 21542 198131;198132;198133;198134;198135;198136;198137;198138;198139;198140;198141 158225;158226;158227;158228;158229;158230;158231;158232;158233;158234;158235 158233 11 IGSLIDVNQSK Unmodified 1172.6401 0.6401021 3734;1846 Q96A72;P61326 MAGOHB;MAGOH Protein mago nashi homolog 2;Protein mago nashi homolog no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.8 3.12 3 1 1 1 2 1 1 56.954 52.534 2 3.0007E-37 59361 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 183.27 111.93 1879800000 49134000 1658700000 22294000 0 0 0 0 0 0 0 0 149740000 0 0 0 23570 3734;1846 21543 198142;198143;198144;198145;198146 158236;158237;158238;158239;158240;158241 158241 6 IGSNGVEMAAK Unmodified 1075.5332 0.53319418 2890 Q6IQ49 SDE2 Protein SDE2 homolog yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 29.632 29.141 2 0.00026704 37180 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.88 63.862 93916000 0 41166000 0 0 0 4930400 8172400 0 0 9613100 0 12457000 0 0 17578000 23571 2890 21544 198147;198148;198149;198150;198151;198152 158242;158243;158244 158244 3 IGSNGVEMAAK Oxidation (M) 1091.5281 0.5281088 2890 Q6IQ49 SDE2 Protein SDE2 homolog yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 16.517 16.749 2 0.0080873 17142 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 47.706 25.176 13647000 0 0 0 0 0 0 3055700 0 2900400 0 4715600 0 0 2975300 0 23572 2890 21544 198153;198154;198155;198156;198157 158245;158246 158245 4524 2 IGSNNSTTPTVPLKPPPPLTLGK Unmodified 2328.3053 0.30529673 3775 Q96CB8 INTS12 Integrator complex subunit 12 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 80.21 80.285 3 0.0009367 92972 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 33.074 29.732 40237000 0 0 0 0 2859700 4129200 4195700 4024300 3854600 6113400 0 9834100 5225900 0 0 23573 3775 21545 198158;198159;198160;198161;198162;198163;198164;198165 158247;158248;158249;158250 158248 4 IGSSLPQDDDAPK Unmodified 1341.6412 0.64122431 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 35.989 35.414 2 0.0023791 43874 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.397 55.192 49602000 0 29542000 0 0 0 0 0 0 0 3524700 3968700 5753700 0 0 6812800 23574 645 21546 198166;198167;198168;198169;198170;198171 158251;158252;158253;158254;158255 158252 5 IGSSLPQDDDAPKK Unmodified 1469.7362 0.73618733 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.53 3 2 11 1 4 1 1 1 1 1 1 1 1 1 1 1 28.42 26.955 2;3 2.6989E-12 28786 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.357 67.468 206160000 9109100 74524000 0 8874100 6907400 6664300 9201200 0 7012600 15555000 17311000 26375000 12999000 11626000 0 23575 645 21547 198172;198173;198174;198175;198176;198177;198178;198179;198180;198181;198182;198183;198184;198185;198186;198187 158256;158257;158258;158259;158260;158261;158262;158263;158264;158265;158266;158267;158268;158269;158270;158271;158272;158273;158274 158272 19 IGSSLSYVNTTEEK Unmodified 1526.7464 0.74641766 3442 Q8NFA0 USP32 Ubiquitin carboxyl-terminal hydrolase 32 yes yes 0 0 0 By MS/MS 10 0 1 1 48.465 49.188 2 0.02618 54533 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.352 28.916 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23576 3442 21548 198188 158275 158275 1 IGSTENISNTK Unmodified 1162.583 0.58298115 3111 Q7Z6E9 RBBP6 E3 ubiquitin-protein ligase RBBP6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 19.575 19.188 2 1.9285E-05 18680 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 125.57 82.971 125430000 0 41593000 0 4731200 3967900 5656100 5659000 5194800 5461800 7433800 7716400 9372600 9264000 5873200 13503000 23577 3111 21549 198189;198190;198191;198192;198193;198194;198195;198196;198197;198198;198199;198200;198201;198202 158276;158277;158278;158279;158280;158281;158282;158283;158284;158285;158286;158287;158288 158280 13 IGSTIDDTISK Unmodified 1148.5925 0.5924832 2428 Q14677 CLINT1 Clathrin interactor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 41.056 40.492 2 6.1206E-14 44233 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 170.47 130.2 839580000 0 174250000 0 38708000 34216000 48953000 55504000 36027000 53535000 57634000 71804000 84624000 60979000 53524000 69824000 23578 2428 21550 198203;198204;198205;198206;198207;198208;198209;198210;198211;198212;198213;198214;198215;198216 158289;158290;158291;158292;158293;158294;158295;158296;158297;158298;158299;158300;158301;158302;158303 158297 11 IGSTSGAEAANK Unmodified 1104.5411 0.54111633 4584 Q9NR09 BIRC6 Baculoviral IAP repeat-containing protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 8.4749 8.3441 2 4.4255E-15 9370 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 147.4 113.32 64856000 0 34206000 0 1203000 1491400 2094100 909480 1207600 1335800 3163800 4503800 4114100 2942400 2878300 4805600 23579 4584 21551 198217;198218;198219;198220;198221;198222;198223;198224;198225;198226;198227;198228;198229 158304;158305;158306;158307;158308;158309;158310;158311;158312;158313 158306 10 IGSVAPDTINNHVK Unmodified 1463.7732 0.77324153 4913 Q9UHY1 NRBP1 Nuclear receptor-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.11 3.8 6 1 12 2 3 2 1 1 1 1 1 1 1 1 1 1 1 1 41.45 39.572 2;3 1.8277E-11 49925 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 131.82 121.59 906970000 206530000 338790000 180720000 10000000 6289800 16828000 15895000 11057000 9547300 21712000 19016000 15327000 11174000 14658000 29415000 23580 4913 21552 198230;198231;198232;198233;198234;198235;198236;198237;198238;198239;198240;198241;198242;198243;198244;198245;198246;198247;198248 158314;158315;158316;158317;158318;158319;158320;158321;158322;158323;158324;158325;158326;158327;158328;158329;158330 158327 12 IGSVPGIHQLR Unmodified 1175.6775 0.67749065 573 O76031 CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 49.095 49.35 3 0.0026958 55470 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 49.3 33.671 150060000 0 0 0 0 8471600 17883000 0 10044000 0 24779000 18747000 22608000 14967000 13217000 19343000 23581 573 21553 198249;198250;198251;198252;198253;198254;198255;198256;198257 158331;158332;158333;158334;158335;158336;158337;158338 158333 8 IGSYLSASTR Unmodified 1053.5455 0.54547343 3907 Q96KG9 SCYL1 N-terminal kinase-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.107 38.283 2 0.00056706 42272 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 129.38 84.618 116200000 0 0 0 0 11278000 14606000 12635000 12444000 7902100 0 17361000 0 0 13918000 26060000 23582 3907 21554 198258;198259;198260;198261;198262;198263;198264;198265;198266;198267;198268;198269 158339;158340;158341;158342;158343;158344;158345;158346;158347;158348;158349;158350 158345 12 IGTDIQDNK Unmodified 1002.4982 0.49818889 997 P14324 FDPS Farnesyl pyrophosphate synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.38 3.72 1 4 2 14 2 4 1 2 1 2 1 1 1 1 1 1 1 1 1 25.894 24.814 2 9.245E-08 24076 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 160.11 115.41 3325500000 288670000 2267100000 37047000 24622000 14510000 28427000 29161000 0 12104000 22596000 104820000 87450000 23794000 96762000 288400000 23583 997 21555 198270;198271;198272;198273;198274;198275;198276;198277;198278;198279;198280;198281;198282;198283;198284;198285;198286;198287;198288;198289;198290 158351;158352;158353;158354;158355;158356;158357;158358;158359;158360;158361;158362;158363;158364;158365;158366;158367;158368 158352 12 IGTLHTSPDLK Unmodified 1180.6452 0.64518747 5064 Q9UPZ3 HPS5 Hermansky-Pudlak syndrome 5 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.71 5 11 2 1 2 1 1 1 1 1 1 1 1 1 1 1 38.642 37.146 2;3 0.00043694 52115 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 121.73 67.765 364630000 165850000 56068000 32653000 8194100 5572600 0 9111000 9861900 7559100 9011800 12088000 12960000 10644000 10427000 14631000 23584 5064 21556 198291;198292;198293;198294;198295;198296;198297;198298;198299;198300;198301;198302;198303;198304;198305;198306 158369;158370;158371;158372;158373;158374;158375;158376;158377 158374 8 IGTNQMAVCAK Unmodified 1191.574 0.57401314 2395 Q14232 EIF2B1 Translation initiation factor eIF-2B subunit alpha yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 33.809 33.993 2 3.4572E-05 36112 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 141.2 114.81 125940000 0 0 0 6542400 6317200 11530000 7468600 0 4333300 11820000 22332000 14147000 6892700 12237000 22316000 23585 2395 21557 198307;198308;198309;198310;198311;198312;198313;198314;198315;198316;198317 158378;158379;158380;158381;158382;158383;158384;158385;158386 158381 9 IGTTPDIILDDLLETDRVTAHF Unmodified 2454.2642 0.26421978 2179 Q10570 CPSF1 Cleavage and polyadenylation specificity factor subunit 1 yes yes 0 0 1 By MS/MS 2 0 1 1 101.89 97.177 3 0.010431 120075 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 28.418 21.141 7817600 0 7817600 0 0 0 0 0 0 0 0 0 0 0 0 0 23586 2179 21558 198318 158387 158387 1 IGTVMTFL Oxidation (M) 896.46774 0.46774038 1264 P30046 DDT D-dopachrome decarboxylase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 4.38 3.77 2 6 1 4 6 2 1 1 1 1 1 87.38 85.165 1;2 0.0022765 92264 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 108.98 98.799 2118900000 909360000 1060600000 75555000 0 0 0 0 0 0 0 14826000 17063000 0 10925000 30540000 23587 1264 21559 198319;198320;198321;198322;198323;198324;198325;198326;198327;198328;198329;198330;198331 158388;158389;158390;158391;158392;158393;158394;158395 158392 1863 5 IGTVMTFL Unmodified 880.47283 0.47282576 1264 P30046 DDT D-dopachrome decarboxylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By matching By MS/MS 6.75 3.85 4 1 7 2 2 1 1 1 1 1 1 1 1 93.374 91.213 1;2 0.011183 113813 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 126.24 87.222 5987300000 2010400000 3806000000 66220000 0 0 788610 611250 0 0 1109600 13308000 12998000 0 11778000 63972000 23588 1264 21559 198332;198333;198334;198335;198336;198337;198338;198339;198340;198341;198342;198343 158396;158397;158398;158399;158400;158401 158399 3 IGVDHVAR Unmodified 865.477 0.47699993 3053 Q7L5N1 COPS6 COP9 signalosome complex subunit 6 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 17.327 17.747 2 0.017183 16727 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 66.073 33.956 40734000 0 0 0 0 0 0 0 0 0 0 0 0 0 11772000 28963000 23589 3053 21560 198344;198345 158402;158403 158403 1 IGVDLIMK Unmodified 887.51502 0.51502492 141 O00303 EIF3F Eukaryotic translation initiation factor 3 subunit F yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.727 74.792 2 0.028474 86137 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 56.721 18.399 100940000 0 0 0 1344600 3411100 7823600 3212700 4748300 3821100 11109000 10478000 8798700 6925100 12380000 26889000 23590 141 21561 198346;198347;198348;198349;198350;198351;198352;198353;198354;198355;198356;198357 158404;158405;158406;158407;158408;158409;158410 158404 7 IGVFPGNYVAPVTR Unmodified 1488.8089 0.80889876 3112 Q7Z6J0 SH3RF1 E3 ubiquitin-protein ligase SH3RF1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.447 80.508 2 0.00015563 92744 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.171 67.295 98063000 0 0 0 3518000 5425100 7548000 6848700 8586300 6359500 10443000 8635400 12921000 6341900 7982500 13453000 23591 3112 21562 198358;198359;198360;198361;198362;198363;198364;198365;198366;198367;198368;198369 158411;158412;158413;158414;158415;158416;158417;158418;158419;158420;158421;158422;158423 158415 13 IGVITNR Unmodified 771.46029 0.46028724 1905 P62701 RPS4X 40S ribosomal protein S4, X isoform yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.852 28.049 2 0.023378 29682 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 88.35 45.303 3447200000 0 0 0 232530000 275160000 237040000 267080000 276210000 183570000 295980000 353340000 411120000 325830000 257110000 332230000 23592 1905 21563 198370;198371;198372;198373;198374;198375;198376;198377;198378;198379;198380;198381 158424;158425;158426;158427;158428;158429 158424 6 IGVLDEGK Unmodified 829.45453 0.45453316 1511 P46781 RPS9 40S ribosomal protein S9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.316 35.498 2 0.0050366 38436 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 114.78 30.539 1817700000 0 0 0 84881000 115330000 97928000 113250000 138280000 86570000 158120000 187320000 229700000 188420000 169600000 248260000 23593 1511 21564 198382;198383;198384;198385;198386;198387;198388;198389;198390;198391;198392;198393 158430;158431;158432;158433;158434;158435;158436;158437;158438;158439;158440;158441;158442;158443;158444;158445 158441 13 IGVMSLIR Unmodified 887.52626 0.52625831 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.372 78.433 2 0.0099856 89926 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.119 38.053 127970000 0 0 0 6213700 5271100 9197700 5786500 10070000 6075600 13689000 12147000 12887000 8113500 14001000 24518000 23594 2451 21565 198394;198395;198396;198397;198398;198399;198400;198401;198402;198403;198404;198405 158446;158447;158448;158449;158450;158451 158447 6 IGVMSLVK Unmodified 845.50446 0.50446024 2201 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.538 69.617 2 0.0074646 79829 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 89.55 48.048 65432000 0 0 0 4361600 4731000 3759300 4674700 5272900 3608100 5709100 6088700 6997200 5281700 5390500 9556700 23595 2201 21566 198406;198407;198408;198409;198410;198411;198412;198413;198414;198415;198416;198417 158452;158453;158454;158455;158456 158454 5 IGVSSDSGSINPMSEGFK Oxidation (M) 1826.8356 0.83564337 1600 P49790 NUP153 Nuclear pore complex protein Nup153 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 2 22 1 1 1 2 2 2 2 2 2 2 2 2 2 1 59.682 59.372 2 8.5016E-46 73916 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 150.26 150.26 374500000 0 77581000 891550 11491000 19973000 23734000 33008000 22875000 12127000 25053000 32223000 38629000 36946000 24921000 15045000 23596 1600 21567 198418;198419;198420;198421;198422;198423;198424;198425;198426;198427;198428;198429;198430;198431;198432;198433;198434;198435;198436;198437;198438;198439;198440;198441 158457;158458;158459;158460;158461;158462;158463;158464;158465;158466;158467;158468;158469;158470 158460 2573 13 IGVSSDSGSINPMSEGFK Unmodified 1810.8407 0.84072875 1600 P49790 NUP153 Nuclear pore complex protein Nup153 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 1 1 6 2 1 1 1 1 1 1 73.947 73.069 2 5.5071E-147 90547 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 285.54 274.61 355270000 0 227400000 0 0 0 0 11231000 0 0 21253000 25979000 18801000 0 19428000 31174000 23597 1600 21567 198442;198443;198444;198445;198446;198447;198448;198449 158471;158472;158473;158474;158475;158476;158477;158478;158479 158473 9 IGVVGGSDFEK Unmodified 1106.5608 0.56078914 272 O15305 PMM2 Phosphomannomutase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 6.9 3.81 3 1 6 1 2 1 1 1 1 1 1 1 51.591 49.225 2 1.8252E-06 66326 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 121.73 94.479 2359900000 84812000 2086900000 42161000 0 0 10633000 8918700 0 0 0 35186000 0 0 27862000 63474000 23598 272 21568 198450;198451;198452;198453;198454;198455;198456;198457;198458;198459 158480;158481;158482;158483;158484;158485;158486;158487;158488 158485 8 IGYLNDRVDELLEK Unmodified 1675.8781 0.87810054 4334 Q9H0P0 NT5C3A Cytosolic 5'-nucleotidase 3A yes yes 0 0 1 By MS/MS 2 0 1 1 85.39 77.259 3 0.017026 100795 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.983 28.829 9613800 9613800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23599 4334 21569 198460 158489 158489 1 IGYNPDTVAFVPISGWNGDNMLEPSANMPWFK Unmodified 3566.6639 0.66389736 1960 P68104;Q5VTE0 EEF1A1;EEF1A1P5 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3 yes no 0 0 0 By MS/MS 2 0 1 1 101.43 96.718 3 0.0005904 119538 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 34.829 25.117 14171000 0 14171000 0 0 0 0 0 0 0 0 0 0 0 0 0 23600 1960 21570 198461 158490 158490 1 IGYSSPLTLSDQSSK Unmodified 1581.7886 0.78861683 403 O60488 ACSL4 Long-chain-fatty-acid--CoA ligase 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.848 65.933 2 2.1903E-14 75257 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 114.72 92.191 390750000 0 0 0 16241000 23533000 23362000 33600000 36634000 18884000 31820000 38947000 53785000 32748000 34794000 46401000 23601 403 21571 198462;198463;198464;198465;198466;198467;198468;198469;198470;198471;198472;198473 158491;158492;158493;158494;158495;158496;158497;158498;158499;158500;158501;158502 158500 12 IGYSSPQTLADQSSK Unmodified 1580.7682 0.76821574 670 O95573 ACSL3 Long-chain-fatty-acid--CoA ligase 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.659 47.822 2 1.8337E-112 53837 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 199.12 183.58 463070000 0 0 0 25063000 36255000 29742000 31262000 34468000 28055000 53681000 43043000 59451000 40390000 31739000 49926000 23602 670 21572 198474;198475;198476;198477;198478;198479;198480;198481;198482;198483;198484;198485 158503;158504;158505;158506;158507;158508;158509;158510;158511;158512;158513;158514;158515 158504 13 IHADLETCVK Unmodified 1184.586 0.58595803 5337 yes yes 0 0 0 By MS/MS 10 0 1 1 34.848 35.156 2 0.029761 37307 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 43.246 14.824 + 20527000 0 0 0 0 0 0 0 0 0 0 0 0 0 20527000 0 23603 5337 21573 198486 158516 158516 1 IHAENAIR Unmodified 922.49846 0.49846366 3062 Q7LBR1 CHMP1B Charged multivesicular body protein 1b yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.464 13.62 2 0.047391 12878 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 47.849 11.663 124850000 0 0 0 9711200 5065100 7109200 6976200 5364600 6073100 13150000 15544000 15552000 9341300 9927400 21031000 23604 3062 21574 198487;198488;198489;198490;198491;198492;198493;198494;198495;198496;198497;198498 158517 158517 1 IHAESLLLDSPAVAK Unmodified 1562.8668 0.86680757 4401 Q9H4L5 OSBPL3 Oxysterol-binding protein-related protein 3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 72.234 72.331 3 0.00087742 83257 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 52.5 42.964 42388000 0 0 0 0 2795500 3915300 0 5102800 4585400 6526900 4511300 5160900 5945600 3844700 0 23605 4401 21575 198499;198500;198501;198502;198503;198504;198505;198506;198507 158518;158519;158520;158521;158522;158523;158524 158520 7 IHAETLK Unmodified 810.45995 0.45995289 4621 Q9NS87 KIF15 Kinesin-like protein KIF15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 15.937 12.641 2 0.02063 15810 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 134.66 6.2809 104950000 55157000 21613000 28178000 0 0 0 0 0 0 0 0 0 0 0 0 23606 4621 21576 198508;198509;198510 158525;158526 158526 1 IHAEVQLK Unmodified 936.53927 0.53926584 2652 Q2M389 KIAA1033 WASH complex subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 35.724 30.841 2 0.02611 43063 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 117.4 50.367 71970000 37171000 22057000 12742000 0 0 0 0 0 0 0 0 0 0 0 0 23607 2652 21577 198511;198512;198513 158527 158527 0 IHAFVQDTTLSEPR Unmodified 1612.8209 0.82092001 3313 Q8N1G2 CMTR1 Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 57.059 57.442 3 0.003726 65317 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 29.491 23.95 18499000 0 0 0 0 0 0 0 0 0 4276400 0 0 0 0 14222000 23608 3313 21578 198514;198515 158528;158529 158528 2 IHAGPITK Unmodified 835.49159 0.49158736 1898 P62333 PSMC6 26S protease regulatory subunit 10B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18.34 17.708 2 0.0044025 16798 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 130.77 61.851 2787100000 1624600000 166820000 515090000 29536000 37866000 42452000 15711000 12821000 9731000 63634000 73382000 114720000 20155000 20211000 40366000 23609 1898 21579 198516;198517;198518;198519;198520;198521;198522;198523;198524;198525;198526;198527;198528;198529;198530 158530;158531;158532;158533;158534;158535;158536;158537;158538;158539;158540 158535 4 IHALTSENTNLK Unmodified 1339.7096 0.70957864 4264 Q9BZF9 UACA Uveal autoantigen with coiled-coil domains and ankyrin repeats yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 5.43 3.96 4 3 1 1 2 1 1 1 35.942 33.414 2;3 7.1539E-06 47377 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.489 74.578 108680000 72644000 13197000 15671000 0 0 2007700 0 0 0 2154700 0 0 0 0 3002500 23610 4264 21580 198531;198532;198533;198534;198535;198536;198537 158541;158542;158543;158544 158542 3 IHAQWQK Unmodified 909.48209 0.48208531 2057 Q01581 HMGCS1 Hydroxymethylglutaryl-CoA synthase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 22.418 18.528 2 0.039683 26639 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.1 51.258 105760000 98275000 0 7481800 0 0 0 0 0 0 0 0 0 0 0 0 23611 2057 21581 198538;198539 158545 158545 1 IHAYSQLLESYR Unmodified 1478.7518 0.75177781 2471 Q15008 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes yes 0 0 0 By MS/MS 10 0 1 1 65.416 65.968 3 5.102E-05 74843 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.085 66.441 11438000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11438000 23612 2471 21582 198540 158546 158546 1 IHCETDEK Unmodified 1030.439 0.43895945 4302 Q9GZR7 DDX24 ATP-dependent RNA helicase DDX24 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 5.547 2.2462 2 0.0090716 4291 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 132.08 71.726 35452000 0 35452000 0 0 0 0 0 0 0 0 0 0 0 0 0 23613 4302 21583 198541;198542 158547;158548;158549 158547 3 IHDPQLLTER Unmodified 1220.6513 0.65133548 1009 P14868 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 27 2 2 2 2 1 3 3 2 3 2 3 2 42.098 42.298 2;3 0.0060298 46819 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 66.568 39.314 445070000 0 0 0 21186000 17510000 34736000 24698000 15941000 20685000 52292000 46878000 81748000 34082000 32046000 63271000 23614 1009 21584 198543;198544;198545;198546;198547;198548;198549;198550;198551;198552;198553;198554;198555;198556;198557;198558;198559;198560;198561;198562;198563;198564;198565;198566;198567;198568;198569 158550;158551;158552;158553;158554;158555;158556;158557;158558;158559 158551 5 IHEACMLALGSVK Unmodified 1427.7265 0.72649104 3946 Q96P70 IPO9 Importin-9 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 74.886 66.756 3 7.4598E-14 88152 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.53 93.428 35724000 35724000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23615 3946 21585 198570;198571 158560;158561 158560 2 IHEACMLALGSVK Oxidation (M) 1443.7214 0.72140566 3946 Q96P70 IPO9 Importin-9 yes yes 0 1 0 By MS/MS 2 0 1 1 55.294 51.417 3 0.02183 63944 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 41.092 29.172 20243000 0 0 20243000 0 0 0 0 0 0 0 0 0 0 0 0 23616 3946 21585 198572 158562 158562 0 IHEATGMPAGK Oxidation (M) 1126.5441 0.54409322 2539 Q15459 SF3A1 Splicing factor 3A subunit 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 7.0691 6.3823 2 5.0254E-10 6825 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 148.94 88.184 325180000 21931000 101970000 111540000 3892700 5315600 6673600 6151900 4892900 9413600 8406400 7305100 8347100 6844300 11499000 10994000 23617 2539 21586 198573;198574;198575;198576;198577;198578;198579;198580;198581;198582;198583;198584;198585;198586;198587;198588 158563;158564;158565;158566;158567;158568;158569;158570;158571;158572;158573;158574;158575;158576;158577;158578;158579;158580 158575 4175 18 IHEATGMPAGK Unmodified 1110.5492 0.5491786 2539 Q15459 SF3A1 Splicing factor 3A subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 17.375 16.564 2 3.8353E-21 15018 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 169.77 140.61 562990000 67553000 253800000 108910000 5270300 4806700 7601000 7342100 7997200 4941500 8980300 14100000 16904000 13451000 14375000 26965000 23618 2539 21586 198589;198590;198591;198592;198593;198594;198595;198596;198597;198598;198599;198600;198601;198602;198603;198604 158581;158582;158583;158584;158585;158586;158587;158588;158589;158590;158591;158592;158593;158594;158595;158596;158597;158598;158599;158600;158601 158586 20 IHEGCEEPATHNALAK Unmodified 1775.8261 0.82608174 2040 Q00610 CLTC Clathrin heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 21.323 21.527 3;4 3.4092E-28 22348 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 108.63 97.78 1055200000 0 0 0 48398000 60163000 115570000 96627000 53836000 69717000 77022000 63014000 108090000 76549000 126480000 159700000 23619 2040 21587 198605;198606;198607;198608;198609;198610;198611;198612;198613;198614;198615;198616;198617;198618;198619;198620;198621;198622;198623;198624;198625;198626;198627;198628 158602;158603;158604;158605;158606;158607;158608;158609;158610;158611;158612;158613;158614;158615;158616;158617;158618;158619;158620 158614 14 IHEIELDK Unmodified 995.52876 0.52876073 5379 yes yes 0 0 0 By MS/MS 10 0 1 1 44.31 44.456 2 0.045547 49679 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 48.504 8.8575 + 32456000 0 0 0 0 0 0 0 0 32456000 0 0 0 0 0 0 23620 5379 21588 198629 158621 158621 1 IHEMLQPGQDQ Unmodified 1294.5976 0.59758535 4094 Q9BQE5 APOL2 Apolipoprotein L2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 37.229 37.008 2 1.7865E-05 39848 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 133.13 125.09 399030000 0 52013000 0 16967000 20761000 19746000 20273000 31326000 18484000 34689000 32731000 52265000 32242000 27026000 40509000 23621 4094 21589 198630;198631;198632;198633;198634;198635;198636;198637;198638;198639;198640;198641;198642 158622;158623;158624;158625;158626;158627;158628;158629;158630;158631;158632;158633;158634 158630 13 IHEMLQPGQDQ Oxidation (M) 1310.5925 0.59249998 4094 Q9BQE5 APOL2 Apolipoprotein L2 yes yes 0 1 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 25.225 24.786 2 4.4148E-09 31081 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.27 124.7 309360000 0 70888000 0 12564000 19128000 16466000 24268000 24927000 23135000 16552000 18970000 23807000 20832000 18694000 19128000 23622 4094 21589 198643;198644;198645;198646;198647;198648;198649;198650;198651;198652;198653;198654;198655;198656 158635;158636;158637;158638;158639;158640;158641;158642;158643 158636 5596 9 IHEPIMLK Unmodified 979.55247 0.55247306 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.87 3 5 1 1 1 1 1 1 1 1 50.566 47.834 2 0.0025172 60872 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 122.13 88.578 299060000 225500000 33107000 20366000 0 0 0 0 0 0 0 4495500 0 5130100 0 10458000 23623 2378 21590 198657;198658;198659;198660;198661;198662;198663;198664 158644;158645;158646;158647;158648;158649;158650;158651;158652;158653 158650 9 IHESIVMDLCQVFDQELDALEIETVQK Unmodified 3201.5574 0.55736661 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 0 By MS/MS 2 0 1 1 104.08 95.953 3 8.9797E-67 123282 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 124.51 119.38 9316200 9316200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23624 2930 21591 198665 158654 158654 1 IHETIESINQLK Unmodified 1423.7671 0.76709352 3688;2969 Q92925;Q6STE5 SMARCD2;SMARCD3 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2;SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.52 3.11 5 22 2 1 2 1 2 2 2 1 2 2 2 2 2 2 2 54.235 53.269 2;3 4.2468E-10 68058 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 122.69 109.9 363890000 55434000 30639000 109860000 8224000 7564900 16806000 12468000 10453000 12524000 14886000 18184000 20053000 12507000 12693000 21598000 23625 3688;2969 21592 198666;198667;198668;198669;198670;198671;198672;198673;198674;198675;198676;198677;198678;198679;198680;198681;198682;198683;198684;198685;198686;198687;198688;198689;198690;198691;198692 158655;158656;158657;158658;158659;158660;158661;158662;158663;158664;158665;158666;158667;158668;158669;158670;158671;158672;158673 158667 14 IHETIETINQLK Unmodified 1437.7827 0.78274359 3856 Q96GM5 SMARCD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 7 2 3 2 61.862 55.887 2;3 1.9577E-67 75366 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 229.17 191.61 337400000 74235000 137270000 125900000 0 0 0 0 0 0 0 0 0 0 0 0 23626 3856 21593 198693;198694;198695;198696;198697;198698;198699 158674;158675;158676;158677;158678 158677 1 IHETNLK Unmodified 853.46577 0.46576654 4061 Q99798 ACO2 Aconitate hydratase, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 9.8398 7.596 2 0.024805 9919 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 101.69 12.957 9485400 0 0 9485400 0 0 0 0 0 0 0 0 0 0 0 0 23627 4061 21594 198700 158679 158679 1 IHETQETTDK Unmodified 1200.5622 0.5622457 2376 Q14149 MORC3 MORC family CW-type zinc finger protein 3 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 6.5939 3.2326 3 0.0082393 4722 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 49.5 34.834 10903000 0 10903000 0 0 0 0 0 0 0 0 0 0 0 0 0 23628 2376 21595 198701;198702 158680;158681 158681 2 IHETQPLLNLK Unmodified 1304.7452 0.74523587 4130 Q9BSM1 PCGF1 Polycomb group RING finger protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 58.215 57.119 3 0.0019955 80509 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.73 47.816 107880000 40555000 0 16704000 0 0 7180800 0 6320400 0 8661400 5881300 6525400 0 4803500 11252000 23629 4130 21596 198703;198704;198705;198706;198707;198708;198709;198710;198711;198712 158682;158683;158684;158685;158686;158687;158688;158689 158685 7 IHFIEAQDLQGK Unmodified 1397.7303 0.73031409 4 A0FGR8 ESYT2 Extended synaptotagmin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.652 59.761 3 0.0034493 68982 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 54.343 45.614 60838000 0 0 0 4829700 4264100 6485500 3219700 4753600 4003200 5337100 5114600 6368400 4444200 4708000 7309600 23630 4 21597 198713;198714;198715;198716;198717;198718;198719;198720;198721;198722;198723;198724 158690;158691;158692;158693;158694;158695;158696 158695 7 IHFPLATYAPVISAEK Unmodified 1755.956 0.95595693 1961;3031;4093;1962 P68363;Q71U36;P0DPH8;P0DPH7;Q6PEY2;Q9BQE3;P68366 TUBA1B;TUBA1A;TUBA3E;TUBA1C;TUBA4A Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.23 2.37 3 28 1 1 1 2 2 3 2 2 2 2 2 2 2 3 4 85.021 85.09 2;3 1.0816E-27 98272 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 158.2 133.86 5272500000 3914400 1750300 540170 48355000 69754000 554950000 112480000 411250000 318990000 528010000 338690000 392430000 165150000 223300000 2102900000 23631 1961;3031;4093;1962 21598 198725;198726;198727;198728;198729;198730;198731;198732;198733;198734;198735;198736;198737;198738;198739;198740;198741;198742;198743;198744;198745;198746;198747;198748;198749;198750;198751;198752;198753;198754;198755 158697;158698;158699;158700;158701;158702;158703;158704;158705;158706;158707;158708;158709;158710;158711;158712;158713;158714;158715;158716;158717;158718;158719;158720;158721;158722;158723;158724;158725;158726;158727;158728;158729;158730;158731;158732;158733;158734;158735;158736;158737;158738;158739 158734 39 IHGAYSSEK Unmodified 990.47706 0.47705951 1382 P36915 GNL1 Guanine nucleotide-binding protein-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 7.7058 4.6211 2 1.6317E-06 8151 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 164.53 101.82 542320000 335570000 87234000 119510000 0 0 0 0 0 0 0 0 0 0 0 0 23632 1382 21599 198756;198757;198758;198759 158740;158741;158742;158743;158744 158743 5 IHGCQILETVYK Unmodified 1459.7493 0.74933497 4881 Q9UGJ1 TUBGCP4 Gamma-tubulin complex component 4 yes yes 0 0 0 By MS/MS 2 0 1 1 74.217 66.087 3 0.032938 87327 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 34.75 26.445 28058000 28058000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23633 4881 21600 198760 158745 158745 1 IHGIIAEENK Unmodified 1122.6033 0.60332266 2843 Q66K14 TBC1D9B TBC1 domain family member 9B yes yes 0 0 0 By MS/MS 2 0 1 1 31.442 28.207 2 0.039067 35920 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 80.684 57.793 6613800 0 0 6613800 0 0 0 0 0 0 0 0 0 0 0 0 23634 2843 21601 198761 158746 158746 0 IHGMDASISVK Unmodified 1156.591 0.59104341 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 42.003 42.282 3 0.0025337 45919 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.971 34.618 24012000 0 0 0 0 0 2590200 1247700 0 2307200 2858300 3003000 0 2734200 3796500 5475200 23635 3023 21602 198762;198763;198764;198765;198766;198767;198768;198769 158747 158747 1 IHGQAYDSTTNLK Unmodified 1446.7103 0.71030693 2758 Q5SVZ6 ZMYM1 Zinc finger MYM-type protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 4 2 2 29.401 24.988 2;3 8.7835E-10 34914 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 114.86 85.701 61704000 45175000 0 16529000 0 0 0 0 0 0 0 0 0 0 0 0 23636 2758 21603 198770;198771;198772;198773 158748;158749;158750;158751 158748 3 IHGSSFVTSTVK Unmodified 1261.6667 0.6666512 5000 Q9ULM3 YEATS2 YEATS domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 2 2 2 1 2 2 2 2 2 2 2 36.452 36.663 2;3 0.0026429 41257 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 43.604 32.679 123760000 0 0 0 4544000 11018000 12801000 7692800 5785300 4976300 10967000 11974000 25787000 9608700 7033300 11572000 23637 5000 21604 198774;198775;198776;198777;198778;198779;198780;198781;198782;198783;198784;198785;198786;198787;198788;198789;198790;198791;198792;198793;198794;198795 158752;158753;158754;158755;158756;158757;158758;158759;158760;158761;158762 158761 8 IHGTGLELTTK Unmodified 1168.6452 0.64518747 2859 Q68DQ2 CRYBG3 Very large A-kinase anchor protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching 6.56 3.86 3 1 5 2 1 1 1 1 1 1 1 41.039 38.81 3 0.0063499 52272 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 45.653 33.077 45877000 14083000 9199100 8353800 0 2268000 0 1201300 0 0 0 0 4778300 0 1987800 4005300 23638 2859 21605 198796;198797;198798;198799;198800;198801;198802;198803;198804 158763;158764;158765;158766 158763 4 IHGVNSGSSEGAQPNTENGVPEITDAATDQGPAESPPTSPSSASR Unmodified 4403.0022 0.0021510278 3239 Q8IWE2 FAM114A1 Protein NOXP20 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 66.362 66.42 4 8.3883E-14 76221 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 37.766 36.395 55611000 0 0 0 0 6158600 7370800 7911700 0 5177400 10823000 9381000 0 0 8788800 0 23639 3239 21606 198805;198806;198807;198808;198809;198810;198811 158767;158768;158769;158770;158771;158772;158773;158774;158775 158773 9 IHHEMQVLEK Oxidation (M) 1278.6391 0.63905624 4555 Q9NPJ6 MED4 Mediator of RNA polymerase II transcription subunit 4 yes yes 0 1 0 By MS/MS 2 0 1 1 17.308 13.099 2 0.018022 19012 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.265 33.035 6341400 6341400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23640 4555 21607 198812 158776 158776 5964 1 IHHEMQVLEK Unmodified 1262.6441 0.64414162 4555 Q9NPJ6 MED4 Mediator of RNA polymerase II transcription subunit 4 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 25.342 26.023 3 0.02234 27617 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 37.73 25.999 19927000 0 0 0 0 0 0 0 0 0 0 0 7004100 0 0 12923000 23641 4555 21607 198813;198814 158777 158777 1 IHIDLPNEQAR Unmodified 1304.6837 0.68369824 1898 P62333 PSMC6 26S protease regulatory subunit 10B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 55.975 56.101 2;3 0.00019693 64206 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 73.499 65.092 1027400000 0 0 0 52902000 70176000 92133000 31312000 30036000 25605000 129750000 146590000 270920000 37235000 44262000 96430000 23642 1898 21608 198815;198816;198817;198818;198819;198820;198821;198822;198823;198824;198825;198826;198827;198828;198829;198830;198831;198832;198833;198834;198835;198836;198837;198838 158778;158779;158780;158781;158782;158783;158784;158785;158786;158787;158788;158789;158790;158791;158792;158793;158794;158795;158796;158797;158798;158799;158800;158801;158802 158800 16 IHIDLPNEQARLDILK Unmodified 1887.0578 0.057796236 1898 P62333 PSMC6 26S protease regulatory subunit 10B yes yes 0 0 1 By MS/MS 3 0 1 1 84.678 81.443 4 0.022581 97518 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 36.392 32.843 6752700 0 6752700 0 0 0 0 0 0 0 0 0 0 0 0 0 23643 1898 21609 198839 158803 158803 1 IHIDRGPEEK Unmodified 1192.62 0.62003536 2154 Q08357 SLC20A2 Sodium-dependent phosphate transporter 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 9.8876 6.3728 3 0.010525 10362 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.04 3.399 335110000 330300000 4810700 0 0 0 0 0 0 0 0 0 0 0 0 0 23644 2154 21610 198840;198841 158804 158804 1 IHIPGGLSPESK Unmodified 1233.6717 0.67173657 1799 P57772 EEFSEC Selenocysteine-specific elongation factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6 4 3 3 2 1 1 1 1 58.929 55.674 2;3 0.0010148 76761 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.017 62.577 119560000 103620000 0 0 0 3801300 0 0 5142500 0 0 0 0 0 0 6998200 23645 1799 21611 198842;198843;198844;198845;198846;198847 158805;158806;158807;158808;158809;158810 158808 6 IHLDNLDK Unmodified 966.51345 0.51344502 4641 Q9NU22 MDN1 Midasin yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 33.913 34.235 2 0.019682 36622 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 63.419 26.398 7924100 0 0 0 0 0 0 0 0 0 0 0 0 3225100 4699000 0 23646 4641 21612 198848;198849 158811 158811 1 IHLETMCEVK Unmodified 1258.605 0.60497892 3534 Q8WU10 PYROXD1 Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 5 2 1 2 54.452 48.448 2;3 0.0048548 60278 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 87.639 62.802 51662000 25935000 14179000 11549000 0 0 0 0 0 0 0 0 0 0 0 0 23647 3534 21613 198850;198851;198852;198853;198854 158812;158813;158814;158815 158814 3 IHLETMCEVK Oxidation (M) 1274.5999 0.59989354 3534 Q8WU10 PYROXD1 Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 1 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 38.386 33.383 3 0.023833 41880 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 54.982 38.844 20093000 7974800 0 12118000 0 0 0 0 0 0 0 0 0 0 0 0 23648 3534 21613 198855;198856 158816 158816 0 IHLFDIDVPGK Unmodified 1252.6816 0.68157298 4573 Q9NQR4 NIT2 Omega-amidase NIT2 yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 2 2 2 2 87.672 82.714 3 0.0002263 105107 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.655 63.116 53751000 31021000 22730000 0 0 0 0 0 0 0 0 0 0 0 0 0 23649 4573 21614 198857;198858;198859;198860 158817;158818;158819;158820;158821 158821 5 IHMGSCAENTAK Oxidation (M) 1333.5755 0.5754697 1177 P24752 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 6 2 2 2 6.6755 3.7112 2;3 2.6905E-14 5634 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 133.89 99.506 242810000 101760000 75371000 65675000 0 0 0 0 0 0 0 0 0 0 0 0 23650 1177 21615 198861;198862;198863;198864;198865;198866 158822;158823;158824;158825;158826 158822 1705 5 IHMGSCAENTAK Unmodified 1317.5806 0.58055508 1177 P24752 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 6 2 2 2 19.062 15.497 2;3 4.5206E-13 22631 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 163.84 146.81 397670000 249670000 118100000 29895000 0 0 0 0 0 0 0 0 0 0 0 0 23651 1177 21615 198867;198868;198869;198870;198871;198872 158827;158828;158829;158830;158831;158832 158830 5 IHNAENIQPGEQK Unmodified 1476.7321 0.732105 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.08 3.39 8 1 28 3 4 2 2 2 2 2 2 2 2 3 2 3 3 3 18.011 17.449 2;3 1.878E-124 17726 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 211.46 188.09 7114800000 62567000 1352500000 729770000 329980000 286430000 327640000 344500000 356080000 313380000 339620000 486910000 686180000 493020000 440500000 565730000 23652 2102 21616 198873;198874;198875;198876;198877;198878;198879;198880;198881;198882;198883;198884;198885;198886;198887;198888;198889;198890;198891;198892;198893;198894;198895;198896;198897;198898;198899;198900;198901;198902;198903;198904;198905;198906;198907;198908;198909 158833;158834;158835;158836;158837;158838;158839;158840;158841;158842;158843;158844;158845;158846;158847;158848;158849;158850;158851;158852;158853;158854;158855;158856;158857;158858;158859;158860;158861;158862;158863;158864;158865;158866;158867;158868;158869;158870;158871;158872;158873 158847 32 IHNFGLIQEK Unmodified 1197.6506 0.6506072 1591 P49748 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 51.839 51.342 2;3 0.000894 57360 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 91.636 73.817 271580000 9363200 0 0 16284000 11974000 23304000 12200000 26489000 16333000 29928000 31081000 19191000 17346000 23383000 34701000 23653 1591 21617 198910;198911;198912;198913;198914;198915;198916;198917;198918;198919;198920;198921;198922 158874;158875;158876;158877;158878;158879;158880;158881;158882;158883;158884;158885;158886 158875 13 IHNIDIPTTQQVPHIEALLK Unmodified 2279.2638 0.26376627 28 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 0 0 0 By MS/MS 3 0 1 1 87.466 84.251 4 0.019582 100958 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 24.893 21.75 2130400 0 2130400 0 0 0 0 0 0 0 0 0 0 0 0 0 23654 28 21618 198923 158887 158887 1 IHNVGSPLK Unmodified 963.55016 0.55016488 1694 P52701 MSH6 DNA mismatch repair protein Msh6 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23.79 23.079 2 0.0016211 32599 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.66 105.35 504550000 227310000 49085000 62189000 8110100 5498700 10870000 8061400 9042800 5284900 18641000 15374000 25478000 15557000 10553000 33498000 23655 1694 21619 198924;198925;198926;198927;198928;198929;198930;198931;198932;198933;198934;198935;198936;198937;198938 158888;158889;158890;158891;158892;158893;158894;158895;158896;158897;158898;158899;158900 158891 12 IHPEGPPLK Unmodified 986.55492 0.5549159 5209 Q9Y4R8 TELO2 Telomere length regulation protein TEL2 homolog yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 28.243 28.481 2 0.0096665 30398 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 66.073 36.924 30475000 0 0 0 0 1490600 2773400 2477100 2513900 0 3418500 5926100 4768800 0 2625900 4481100 23656 5209 21620 198939;198940;198941;198942;198943;198944;198945;198946;198947 158901;158902 158902 2 IHPERTPSEK Unmodified 1192.62 0.62003536 4602 Q9NRG4 SMYD2 N-lysine methyltransferase SMYD2 yes yes 0 0 1 By MS/MS 2 0 2 2 10.136 6.361 2;3 0.015758 10314 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.894 10.338 378330000 378330000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23657 4602 21621 198948;198949 158903;158904 158903 2 IHPQTIIAGWR Unmodified 1290.7197 0.71968982 1980 P78371 CCT2 T-complex protein 1 subunit beta yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 2 2 2 2 2 2 2 2 2 3 68.053 68.246 2;3 0.00071215 77936 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 74.944 68.943 268240000 0 0 0 0 2364900 34907000 6610400 13141000 14736000 15219000 13150000 24631000 13498000 18384000 111600000 23658 1980 21622 198950;198951;198952;198953;198954;198955;198956;198957;198958;198959;198960;198961;198962;198963;198964;198965;198966;198967;198968;198969;198970;198971 158905;158906;158907;158908;158909;158910;158911;158912;158913;158914;158915;158916;158917;158918 158918 11 IHPTSVISGYR Unmodified 1228.6564 0.65642086 1067 P17987 TCP1 T-complex protein 1 subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 25 2 2 2 2 2 2 2 3 2 2 2 2 44.608 44.791 2;3 4.0825E-05 50458 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 86.18 76.525 1056200000 0 0 0 48192000 30271000 98004000 61910000 53512000 39326000 90625000 120630000 110780000 83750000 95153000 224100000 23659 1067 21623 198972;198973;198974;198975;198976;198977;198978;198979;198980;198981;198982;198983;198984;198985;198986;198987;198988;198989;198990;198991;198992;198993;198994;198995;198996 158919;158920;158921;158922;158923;158924;158925;158926;158927;158928;158929;158930;158931;158932;158933;158934;158935;158936;158937 158919 13 IHPVSTMVK Oxidation (M) 1026.5532 0.55320134 836 P07195 LDHB L-lactate dehydrogenase B chain yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.57 3.96 3 4 1 1 1 1 1 1 1 20.071 18.553 2 0.005604 17481 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 69.423 42.821 272830000 104550000 33370000 41951000 0 0 0 0 0 0 5835400 0 43700000 6380400 37047000 0 23660 836 21624 198997;198998;198999;199000;199001;199002;199003 158938;158939;158940;158941;158942 158942 1021 4 IHPVSTMVK Unmodified 1010.5583 0.55828672 836 P07195 LDHB L-lactate dehydrogenase B chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 28.292 28.836 2 0.0034752 30248 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 103.83 64.291 767890000 0 0 0 0 0 0 0 0 0 0 134990000 94174000 0 128790000 409940000 23661 836 21624 199004;199005;199006;199007 158943;158944;158945 158944 1 IHQETFGK Unmodified 958.48723 0.48723027 2528 Q15393 SF3B3 Splicing factor 3B subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.1 3.91 4 1 5 2 2 1 1 1 1 1 1 15.348 13.643 2 0.0047513 12274 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 109.48 72.319 1546500000 818740000 178680000 297990000 0 21906000 0 0 0 0 0 63036000 51435000 47543000 0 67182000 23662 2528 21625 199008;199009;199010;199011;199012;199013;199014;199015;199016;199017 158946;158947;158948;158949;158950;158951;158952;158953;158954;158955;158956;158957 158948 11 IHQIEYAMEAVK Oxidation (M) 1446.7177 0.71770049 1193 P25786 PSMA1 Proteasome subunit alpha type-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 2 1 2 1 2 2 1 2 1 41.895 42.087 2;3 1.4401E-05 46538 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 103.31 74.15 168710000 0 0 0 2649400 10190000 6175300 14165000 3540100 0 0 40575000 27033000 11963000 19722000 32693000 23663 1193 21626 199018;199019;199020;199021;199022;199023;199024;199025;199026;199027;199028;199029;199030;199031;199032 158958;158959;158960;158961;158962;158963;158964 158961 1727 5 IHQLELQTMK Oxidation (M) 1255.6595 0.65945733 4077 Q99996 AKAP9 A-kinase anchor protein 9 yes yes 0 1 0 By MS/MS 2 0 1 1 43.143 36.35 3 0.0073916 50046 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.37 39.93 33834000 33834000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23664 4077 21627 199033 158965 158965 5582 1 IHQLELQTMK Unmodified 1239.6645 0.66454271 4077 Q99996 AKAP9 A-kinase anchor protein 9 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 55.211 49.161 3 0.011814 61331 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 55.353 44.981 26772000 22503000 0 4268900 0 0 0 0 0 0 0 0 0 0 0 0 23665 4077 21627 199034;199035 158966;158967;158968 158968 2 IHQTGLK Unmodified 795.46029 0.46028724 3683 Q92900 UPF1 Regulator of nonsense transcripts 1 yes yes 0 0 0 By MS/MS By matching By MS/MS 2 0 3 1 1 1 8.6311 5.5909 2 0.021742 7190 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 134.85 38.894 399700000 219210000 45385000 135100000 0 0 0 0 0 0 0 0 0 0 0 0 23666 3683 21628 199036;199037;199038 158969;158970 158970 1 IHSDCAANQQVTYR Unmodified 1661.758 0.75800217 2075 Q02413 DSG1 Desmoglein-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.867 23.073 3 1.6318E-19 24239 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 117.7 106.43 448240000 0 0 0 98996000 25946000 19399000 19020000 22994000 16058000 40219000 25697000 51303000 70613000 35314000 22686000 23667 2075 21629 199039;199040;199041;199042;199043;199044;199045;199046;199047;199048;199049;199050 158971;158972;158973;158974;158975;158976;158977;158978;158979;158980;158981;158982;158983 158971 13 IHSDHLVASEK Unmodified 1234.6306 0.63060004 3501 Q8TDH9 BLOC1S5 Biogenesis of lysosome-related organelles complex 1 subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 17.657 14.208 3 0.00067135 20939 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.245 66.566 253760000 187410000 26226000 40125000 0 0 0 0 0 0 0 0 0 0 0 0 23668 3501 21630 199051;199052;199053 158984;158985;158986;158987 158986 4 IHSDIVK Unmodified 810.45995 0.45995289 828 P06737 PYGL Glycogen phosphorylase, liver form yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 16.606 13.724 2 0.018512 17224 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 138.37 30.694 227100000 0 171950000 55158000 0 0 0 0 0 0 0 0 0 0 0 0 23669 828 21631 199054;199055 158988 158988 1 IHSDLAEERGLK Unmodified 1366.7205 0.72047768 2369 Q14126 DSG2 Desmoglein-2 yes yes 0 0 1 By MS/MS 2 0 1 1 35.886 29.539 3 0.014742 41270 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.659 31.448 13906000 13906000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23670 2369 21632 199056 158989 158989 1 IHSITGLPPAMQK Unmodified 1391.7595 0.75950572 188 O14562 UBFD1 Ubiquitin domain-containing protein UBFD1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 5 2 2 1 66.212 60.24 2;3 2.439E-18 81011 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.82 85.308 69805000 34606000 30003000 5196500 0 0 0 0 0 0 0 0 0 0 0 0 23671 188 21633 199057;199058;199059;199060;199061 158990;158991;158992;158993;158994;158995;158996;158997 158994 8 IHSLTHLDSVTK Unmodified 1349.7303 0.73031409 1506 P46736 BRCC3 Lys-63-specific deubiquitinase BRCC36 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 36.152 36.39 3 0.002581 40096 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 45.115 30.239 132550000 0 0 0 5654600 0 8619800 5560400 7555900 6079200 10163000 10947000 21590000 16514000 15563000 24303000 23672 1506 21634 199062;199063;199064;199065;199066;199067;199068;199069;199070;199071;199072 158998;158999;159000;159001;159002;159003 158998 5 IHSPIPDMSK Oxidation (M) 1139.5645 0.56449431 2912 Q6NZY4 ZCCHC8 Zinc finger CCHC domain-containing protein 8 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 5 2 1 2 35.886 30.995 2;3 0.025465 43649 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 59.245 42.469 51672000 26635000 11618000 13419000 0 0 0 0 0 0 0 0 0 0 0 0 23673 2912 21635 199073;199074;199075;199076;199077 159004;159005 159005 2 IHSPSPHK Unmodified 901.477 0.47699993 4132 Q9BSU1 C16orf70 UPF0183 protein C16orf70 yes yes 0 0 0 By MS/MS 2 0 1 1 7.5426 4.0275 2 0.019798 7192 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.472 29.37 25304000 25304000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23674 4132 21636 199078 159006 159006 1 IHSQEEALR Unmodified 1081.5516 0.55162144 181 O00764 PDXK Pyridoxal kinase yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 13.018 13.367 2 0.0097334 11757 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.88 36.731 35360000 0 0 0 0 0 0 0 0 0 0 6523000 4238400 1435800 6301500 16861000 23675 181 21637 199079;199080;199081;199082;199083 159007 159007 1 IHSSQSSPQQAVLTIPSQLK Unmodified 2148.1539 0.15388147 5000 Q9ULM3 YEATS2 YEATS domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 74.696 74.064 3 4.18E-07 95285 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.008 49.656 88378000 8467300 0 0 3786400 7318600 9534400 3150800 0 3865700 11575000 9774800 14647000 3701600 4333700 8222300 23676 5000 21638 199084;199085;199086;199087;199088;199089;199090;199091;199092;199093;199094;199095 159008;159009;159010;159011;159012;159013;159014;159015;159016;159017;159018;159019 159012 12 IHTDFEK Unmodified 888.43413 0.43413207 4636 Q9NTK5 OLA1 Obg-like ATPase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19.46 18.829 2 0.026713 18328 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 78.178 16.684 1054600000 189660000 268870000 473710000 7782600 5643600 16294000 6476600 5062600 4569900 12697000 10828000 13919000 7438900 8262000 23362000 23677 4636 21639 199096;199097;199098;199099;199100;199101;199102;199103;199104;199105;199106;199107;199108;199109;199110 159020;159021;159022 159022 2 IHTEPQLSAALEYVR Unmodified 1725.905 0.90498399 1528 P47897 QARS Glutamine--tRNA ligase yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 77.739 77.88 3 0.00082708 89990 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 55.755 39.176 42093000 0 0 0 0 0 9749600 0 7094100 4771300 7620800 6528400 6329000 0 0 0 23678 1528 21640 199111;199112;199113;199114;199115;199116 159023;159024;159025;159026;159027;159028 159024 5 IHTLELK Unmodified 852.5069 0.50690308 3308 Q8N163 CCAR2 Cell cycle and apoptosis regulator protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 34.889 34.176 2 0.017603 50529 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 116.54 53.828 620140000 377260000 67366000 0 0 9888300 16139000 11506000 10132000 7351000 16546000 22853000 17123000 20150000 18161000 25660000 23679 3308 21641 199117;199118;199119;199120;199121;199122;199123;199124;199125;199126;199127;199128;199129 159029;159030;159031;159032;159033;159034;159035;159036;159037;159038 159033 10 IHVDFSQSVAK Unmodified 1229.6404 0.64043645 3537 Q8WUA2 PPIL4 Peptidyl-prolyl cis-trans isomerase-like 4 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 49.058 49.787 2 0.017211 55329 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.347 40.424 16300000 0 0 0 0 0 0 0 0 0 0 0 8731900 0 0 7567900 23680 3537 21642 199130;199131 159039;159040 159039 1 IHVELSEK Unmodified 953.5182 0.51819605 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 31.056 31.564 2 0.013643 33098 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.877 0 14667000 0 0 0 0 0 0 0 0 0 0 0 0 0 4496500 10170000 23681 2495 21643 199132;199133 159041 159041 1 IHVILAQK Unmodified 920.58074 0.58073672 4143 Q9BTE3 MCMBP Mini-chromosome maintenance complex-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.85 37.03 2 0.0050526 41213 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 134.12 101.19 81303000 0 0 0 2000800 2877700 10208000 4307500 3761000 3460900 7404200 6056200 13851000 6628000 6339700 14407000 23682 4143 21644 199134;199135;199136;199137;199138;199139;199140;199141;199142;199143;199144;199145 159042;159043;159044;159045;159046;159047;159048;159049 159042 7 IHVLEAQDLIAK Unmodified 1348.7715 0.77145062 4128 Q9BSJ8 ESYT1 Extended synaptotagmin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.678 70.75 3 0.00039746 80963 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 62.408 48.15 88232000 0 0 0 3739300 3611400 7930200 4873200 8519200 5170500 10201000 8302700 11275000 7263800 5952600 11393000 23683 4128 21645 199146;199147;199148;199149;199150;199151;199152;199153;199154;199155;199156;199157 159050;159051;159052;159053;159054;159055;159056;159057;159058;159059;159060;159061 159054 12 IHVQSSSDSSDEPAEK Unmodified 1714.7646 0.76458692 3543 Q8WUF8 FAM172A Protein FAM172A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.25 3.34 2 1 1 2 1 1 18.34 15.983 3 0.010011 21198 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 37.438 33.134 28277000 0 24785000 766000 0 0 0 0 0 0 0 2726300 0 0 0 0 23684 3543 21646 199158;199159;199160;199161 159062;159063;159064;159065 159062 4 IHVSDQELQSANASVDDSRLEELK Unmodified 2682.3097 0.30966642 1137 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.89 3.63 4 2 3 2 3 1 1 1 1 72.323 69.188 3;4 3.3811E-17 78370 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.837 70.845 1915800000 515330000 1291400000 40609000 0 0 0 0 0 0 0 8212500 9786000 0 0 50499000 23685 1137 21647 199162;199163;199164;199165;199166;199167;199168;199169;199170 159066;159067;159068;159069;159070;159071;159072;159073;159074;159075;159076 159070 10 IHVSPDFK Unmodified 941.49707 0.49706667 204 O14727 APAF1 Apoptotic protease-activating factor 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 44.035 38.705 2 0.0035079 53096 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 143.61 88.169 103010000 78659000 0 24352000 0 0 0 0 0 0 0 0 0 0 0 0 23686 204 21648 199171;199172 159077;159078;159079 159078 3 IHVSYQETQQMQMK Oxidation (M) 1765.8127 0.81273986 3151 Q86UP2 KTN1 Kinectin yes yes 0 1 0 By MS/MS 2 0 2 2 42.222 35.487 3 0.00053984 52615 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.219 61.527 11451000 11451000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23687 3151 21649 199173;199174 159080;159081 159081 4771 2 IHVSYQETQQMQMK Unmodified 1749.8178 0.81782524 3151 Q86UP2 KTN1 Kinectin yes yes 0 0 0 By MS/MS 2 0 1 1 56.153 48.005 3 0.00057673 65726 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.891 42.972 8620000 8620000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23688 3151 21649 199175 159082 159082 0 IHVTPLIPGK Unmodified 1073.6597 0.65971533 4333 Q9H0L4 CSTF2T Cleavage stimulation factor subunit 2 tau variant yes yes 0 0 0 By MS/MS 2 0 1 1 69.146 60.852 2 0.02329 81193 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.582 35.62 8022700 8022700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23689 4333 21650 199176 159083 159083 1 IHVWNGESGIK Unmodified 1238.6408 0.6407708 2984 Q6UXN9 WDR82 WD repeat-containing protein 82 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 2 24 2 2 2 2 2 2 2 2 2 2 2 2 2 46.825 46.351 2;3 0.00087155 51996 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 75.294 55.517 583670000 174390000 0 0 17305000 14014000 31617000 22606000 24600000 25518000 30965000 44613000 41721000 44366000 48605000 63354000 23690 2984 21651 199177;199178;199179;199180;199181;199182;199183;199184;199185;199186;199187;199188;199189;199190;199191;199192;199193;199194;199195;199196;199197;199198;199199;199200;199201;199202 159084;159085;159086;159087;159088;159089;159090;159091;159092;159093;159094;159095;159096;159097 159086 10 IHVYGYSMAYGPAQHAISTEK Oxidation (M) 2338.1052 0.10521671 4613 Q9NRX4 PHPT1 14 kDa phosphohistidine phosphatase yes yes 0 1 0 By MS/MS 2 0 1 1 68.469 60.175 3 2.5479E-13 80401 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.958 90.091 31218000 31218000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23691 4613 21652 199203 159098 159098 6015 1 IHYLDTTTLIEPAPR Unmodified 1738.9254 0.92538508 1500 P46109 CRKL Crk-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 74.978 75.084 3 0.034715 86310 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 27.669 17.824 154740000 0 0 0 0 3845200 10185000 5478100 9038300 0 10319000 19580000 20456000 6372400 13060000 56402000 23692 1500 21653 199204;199205;199206;199207;199208;199209;199210;199211;199212;199213 159099 159099 1 IHYLDTTTLIEPVSR Unmodified 1756.9359 0.93594977 1499 P46108 CRK Adapter molecule crk yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 77.084 77.308 3 0.001555 88753 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.622 34.995 32221000 0 0 0 0 0 0 0 0 0 0 3728400 6346200 0 0 22146000 23693 1499 21654 199214;199215;199216 159100 159100 1 IIAALFK Unmodified 774.50036 0.50036114 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.854 70.928 2 0.044016 80455 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.994 38.465 125090000 0 0 0 7650900 7636800 12058000 9816700 9392100 8020700 11316000 11023000 14475000 10869000 9188600 13647000 23694 5189 21655 199217;199218;199219;199220;199221;199222;199223;199224;199225;199226;199227;199228 159101;159102 159101 2 IIAATFLFK Unmodified 1022.6165 0.61645353 2356 Q13907 IDI1 Isopentenyl-diphosphate Delta-isomerase 1 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 90.349 86.364 2 0.011889 111212 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.568 19.764 16526000 8150700 0 0 0 0 0 0 0 0 0 0 0 0 0 8375200 23695 2356 21656 199229;199230 159103;159104 159104 2 IIAATIENAQPILQIDNAR Unmodified 2063.1375 0.13750312 70 CON__P08779;P08779 KRT16 Keratin, type I cytoskeletal 16 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 25 2 2 2 2 2 3 2 2 2 2 2 2 85.038 85.104 2;3 0 98650 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 305.51 289.57 + 876050000 0 0 0 50135000 31202000 21977000 40699000 113160000 38845000 146000000 57766000 56175000 223410000 53874000 42813000 23696 70 21657 199231;199232;199233;199234;199235;199236;199237;199238;199239;199240;199241;199242;199243;199244;199245;199246;199247;199248;199249;199250;199251;199252;199253;199254;199255 159105;159106;159107;159108;159109;159110;159111;159112;159113;159114;159115;159116;159117;159118;159119;159120;159121;159122;159123;159124;159125;159126;159127;159128;159129;159130;159131 159110 27 IIAEGANGPTTPEADK Unmodified 1582.7839 0.7838658 721 P00367;P49448 GLUD1;GLUD2 Glutamate dehydrogenase 1, mitochondrial;Glutamate dehydrogenase 2, mitochondrial yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 37.431 36.642 2 3.7229E-31 45289 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.56 120.19 168510000 5741500 61756000 0 5249300 2730600 2401300 15968000 25582000 16146000 3376400 7374900 0 2631800 5293700 14260000 23697 721 21658 199256;199257;199258;199259;199260;199261;199262;199263;199264;199265;199266;199267;199268 159132;159133;159134;159135;159136;159137;159138;159139;159140;159141 159133 10 IIAELNETWEEK Unmodified 1473.7351 0.73512469 378;396 O43896;O60333;Q12756 KIF1C;KIF1B;KIF1A Kinesin-like protein KIF1C;Kinesin-like protein KIF1B;Kinesin-like protein KIF1A no no 0 0 0 By MS/MS 2 0 1 1 77.355 72.58 2 0.0025422 90584 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.813 51.655 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23698 378;396 21659 199269 159142 159142 1 IIAFVGSPVEDNEK Unmodified 1516.7773 0.77732386 1752 P55036 PSMD4 26S proteasome non-ATPase regulatory subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 73.286 73.079 2 4.919E-72 84286 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 185.08 158.96 1435500000 0 5262800 0 101460000 111030000 136610000 37325000 35306000 33889000 264490000 251070000 278320000 29073000 46995000 104630000 23699 1752 21660 199270;199271;199272;199273;199274;199275;199276;199277;199278;199279;199280;199281;199282 159143;159144;159145;159146;159147;159148;159149;159150;159151;159152;159153;159154;159155;159156;159157;159158;159159 159146 17 IIALDGDTK Unmodified 944.51786 0.51786169 1249 P29401 TKT Transketolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 2 1 1 1 1 1 1 1 1 2 1 40.309 40.455 2 0.0032698 46077 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 93.162 41.475 1555300000 0 0 0 31260000 38289000 22007000 25216000 25134000 14104000 27755000 261680000 233410000 27718000 219930000 628840000 23700 1249 21661 199283;199284;199285;199286;199287;199288;199289;199290;199291;199292;199293;199294;199295;199296 159160;159161;159162;159163;159164;159165;159166;159167;159168;159169;159170;159171;159172 159160 12 IIANALSSEPACLAEIEEDK Unmodified 2172.062 0.062014494 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 83.228 83.311 2;3 9.8019E-54 96095 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 123.55 113.8 632430000 0 0 0 1636200 36404000 30720000 20655000 39928000 27694000 69024000 71159000 71837000 23806000 58192000 181380000 23701 1986 21662 199297;199298;199299;199300;199301;199302;199303;199304;199305;199306;199307;199308;199309;199310;199311;199312;199313;199314;199315;199316;199317;199318;199319;199320 159173;159174;159175;159176;159177;159178;159179;159180;159181;159182;159183;159184;159185;159186;159187 159177 13 IIAPPER Unmodified 794.46504 0.46503826 1951;1815;1958;2711 P60709;P63261;P68032;P63267;P68133;P62736;Q562R1 ACTB;ACTG1;ACTC1;ACTG2;ACTA1;ACTA2;ACTBL2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, aortic smooth muscle;Beta-actin-like protein 2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.631 30.82 2 0.020823 33298 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 107.74 29.996 11811000000 0 0 0 600370000 1019000000 758890000 1038300000 657960000 566940000 1057300000 1232500000 1459400000 951310000 961990000 1507300000 23702 1815;1951;1958;2711 21663 199321;199322;199323;199324;199325;199326;199327;199328;199329;199330;199331;199332 159188;159189;159190;159191;159192;159193;159194;159195;159196;159197;159198;159199;159200;159201 159190 14 IIAPPERK Unmodified 922.56 0.56000128 1951;1815;1958;2711 P60709;P63261;P68032;P63267;P68133;P62736;Q562R1 ACTB;ACTG1;ACTC1;ACTG2;ACTA1;ACTA2;ACTBL2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, aortic smooth muscle;Beta-actin-like protein 2 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.16 3.73 5 2 12 2 3 2 1 1 1 1 1 1 1 1 1 1 1 1 21.48 20.778 2 0.006388 21449 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 131.04 80.071 33393000000 75886000 2557900000 2021800000 1435800000 1902700000 1867800000 1719500000 2412900000 1011700000 2440800000 3454800000 3935100000 2491800000 2431100000 3633200000 23703 1815;1951;1958;2711 21664 199333;199334;199335;199336;199337;199338;199339;199340;199341;199342;199343;199344;199345;199346;199347;199348;199349;199350;199351 159202;159203;159204;159205;159206;159207;159208;159209;159210;159211;159212;159213;159214;159215 159203 5 IIATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEGVTK Unmodified 4497.1832 0.18321562 955 P11766 ADH5 Alcohol dehydrogenase class-3 yes yes 0 0 0 By MS/MS 2 0 1 1 97.304 89.173 4 8.4372E-125 115180 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 120.47 113.02 23972000 23972000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23704 955 21665 199352 159216;159217 159217 2 IIATVLMTEDIK Oxidation (M) 1361.7476 0.74760363 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.8 3.53 6 1 18 2 3 2 1 2 2 2 1 1 2 2 1 1 2 1 74.715 74.001 2;3 2.7005E-14 90295 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 135.86 95.507 1416500000 44368000 162360000 57850000 54713000 84085000 93602000 84241000 89366000 110460000 114040000 115190000 154400000 52457000 102460000 96875000 23705 2102 21666 199353;199354;199355;199356;199357;199358;199359;199360;199361;199362;199363;199364;199365;199366;199367;199368;199369;199370;199371;199372;199373;199374;199375;199376;199377 159218;159219;159220;159221;159222;159223;159224;159225;159226;159227;159228;159229;159230;159231;159232;159233;159234;159235;159236;159237;159238;159239;159240 159231 3403 21 IIATVLMTEDIK Unmodified 1345.7527 0.75268901 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.33 3.77 4 8 1 2 1 1 1 1 1 1 1 1 1 84.11 82.327 2 2.5504E-05 103061 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.24 74.432 137930000 54643000 51830000 7901300 0 1592800 0 835130 0 0 3919300 4502400 4138200 981170 0 7591000 23706 2102 21666 199378;199379;199380;199381;199382;199383;199384;199385;199386;199387;199388;199389 159241;159242;159243;159244;159245;159246;159247;159248;159249 159242 8 IICDLVEEK Unmodified 1117.5689 0.56891099 121 O00159 MYO1C Unconventional myosin-Ic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 53.424 52.682 2 0.0031541 59884 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 92.439 43.936 292080000 0 139770000 0 10454000 13335000 12379000 14397000 13686000 9140500 16584000 19073000 0 15394000 10961000 16904000 23707 121 21667 199390;199391;199392;199393;199394;199395;199396;199397;199398;199399;199400;199401;199402 159250;159251;159252;159253;159254;159255;159256;159257;159258;159259;159260 159251 9 IICMGAK Unmodified 791.40337 0.40336598 476 O75223 GGCT Gamma-glutamylcyclotransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 4 3.46 3 1 1 1 1 1 28.998 25.638 2 0.035372 27984 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 70.865 24.841 956670000 451850000 402450000 11907000 90467000 0 0 0 0 0 0 0 0 0 0 0 23708 476 21668 199403;199404;199405;199406 159261;159262 159262 2 IICMGAK Oxidation (M) 807.39828 0.39828061 476 O75223 GGCT Gamma-glutamylcyclotransferase yes yes 0 1 0 By MS/MS By MS/MS 2.67 0.471 1 2 1 2 11.846 8.3019 2 0.040675 10388 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 77.944 29.183 247890000 1969300 245920000 0 0 0 0 0 0 0 0 0 0 0 0 0 23709 476 21668 199407;199408;199409 159263 159263 1 IICPIGVPETPK Unmodified 1322.7268 0.72680861 2195 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 6.25 3.77 1 1 2 2 1 1 74.625 70.319 2 0.0043413 88022 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.533 56.586 98680000 0 98680000 0 0 0 0 0 0 0 0 0 0 0 0 0 23710 2195 21669 199410;199411;199412;199413 159264;159265;159266 159264 3 IICQGFTGK Unmodified 1022.5219 0.52190122 1716 P53597 SUCLG1 Succinyl-CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 40.901 35.034 2 0.0078231 48218 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 91.853 70.325 38827000 14720000 24107000 0 0 0 0 0 0 0 0 0 0 0 0 0 23711 1716 21670 199414;199415 159267;159268 159268 2 IICTGATSEEEAK Unmodified 1407.6552 0.65515981 1899 P62380 TBPL1 TATA box-binding protein-like protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 28.659 24.311 2 0.019686 31923 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 59.418 41.554 28257000 0 28257000 0 0 0 0 0 0 0 0 0 0 0 0 0 23712 1899 21671 199416 159269 159269 1 IIDDSEITK Unmodified 1032.5339 0.53390569 3734;1846 Q96A72;P61326 MAGOHB;MAGOH Protein mago nashi homolog 2;Protein mago nashi homolog no no 0 0 0 By matching By MS/MS 10 0 2 1 1 35.386 35.919 2 0.046892 38588 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.864 14.982 7717600 0 0 0 0 0 0 0 0 0 0 0 0 1520500 0 6197100 23713 3734;1846 21672 199417;199418 159270 159270 1 IIDEDGLLNLIR Unmodified 1382.7769 0.77692993 1349 P35251 RFC1 Replication factor C subunit 1 yes yes 0 0 0 By MS/MS 10 0 1 1 92.503 92.64 2 0.036558 107388 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.161 20.385 1470600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1470600 23714 1349 21673 199419 159271 159271 1 IIDELNVK Unmodified 942.5386 0.53859714 962 P12111 COL6A3 Collagen alpha-3(VI) chain yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 46.927 43.323 2 0.0084735 47315 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 86.086 6.9704 32093000 7725800 0 0 0 0 0 0 0 0 0 0 24367000 0 0 0 23715 962 21674 199420;199421 159272;159273;159274 159274 3 IIDETMAQLQDLK Oxidation (M) 1532.7756 0.7756093 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 63.435 62.553 2 1.8435E-36 78515 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 182.92 129.14 213620000 0 57709000 4915900 7792000 9195100 13930000 11645000 9737500 9507000 15936000 17258000 18251000 13196000 7264500 17277000 23716 2431 21675 199422;199423;199424;199425;199426;199427;199428;199429;199430;199431;199432;199433;199434;199435;199436;199437;199438 159275;159276;159277;159278;159279;159280;159281;159282;159283;159284;159285;159286;159287;159288;159289;159290;159291;159292;159293;159294 159279 3994 18 IIDETMAQLQDLK Unmodified 1516.7807 0.78069468 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 6.56 3.86 3 1 5 1 2 1 1 1 1 1 1 62.262 60.17 2;3 1.3276E-41 94840 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 223.14 116.95 687520000 15304000 611980000 5142200 0 3479700 4852600 42432000 3140900 1188700 0 0 0 0 0 0 23717 2431 21675 199439;199440;199441;199442;199443;199444;199445;199446;199447 159295;159296;159297;159298;159299 159296 4 IIDEVVNK Unmodified 928.52295 0.52294707 693 O95816 BAG2 BAG family molecular chaperone regulator 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.968 34.15 2 0.0064039 36970 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 120.49 64.984 596060000 0 0 0 26926000 38271000 37323000 37061000 45574000 26767000 53254000 75870000 65511000 53139000 46573000 89795000 23718 693 21676 199448;199449;199450;199451;199452;199453;199454;199455;199456;199457;199458;199459 159300;159301;159302;159303;159304;159305;159306;159307;159308;159309;159310;159311;159312;159313;159314 159312 14 IIDFGFAR Unmodified 937.50215 0.50215205 520 O75582 RPS6KA5 Ribosomal protein S6 kinase alpha-5 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 77.089 77.094 2 0.020537 89036 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 62.717 28.979 22886000 0 0 0 2228300 0 5534200 0 0 0 0 0 0 2820400 3826500 8476400 23719 520 21677 199460;199461;199462;199463;199464;199465 159315;159316;159317;159318;159319 159315 5 IIDFLSALEGFK Unmodified 1351.7388 0.73875351 1694 P52701 MSH6 DNA mismatch repair protein Msh6 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 100.95 96.89 2 0.00043623 119876 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.058 63.971 5494500 0 5494500 0 0 0 0 0 0 0 0 0 0 0 0 0 23720 1694 21678 199466;199467 159320;159321 159320 2 IIDGLLVMR Oxidation (M) 1044.6002 0.60015154 331 O43447 PPIH Peptidyl-prolyl cis-trans isomerase H yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 70.823 70.758 2 0.011494 81136 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 55.676 22.836 26465000 0 0 0 4453600 4221600 0 4440400 5017400 3453400 0 0 0 0 4879000 0 23721 331 21679 199468;199469;199470;199471;199472;199473 159322;159323 159322 422 2 IIDGLTGEK Unmodified 944.51786 0.51786169 16 A3KMH1 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 39.194 39.801 2 0.030582 43719 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 69.628 16.276 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23722 16 21680 199474;199475 159324;159325 159325 2 IIDINYYPVPEACLSNK Unmodified 2007.9976 0.99756374 1171 P23921 RRM1 Ribonucleoside-diphosphate reductase large subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.59 2.96 3 2 22 1 3 1 2 2 2 2 2 2 2 2 2 2 2 84.966 84.243 2;3 1.2616E-06 97926 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 107.93 94.649 688460000 16545000 270480000 9640500 0 18390000 38471000 14843000 27649000 23820000 56438000 39732000 39104000 12970000 32205000 88165000 23723 1171 21681 199476;199477;199478;199479;199480;199481;199482;199483;199484;199485;199486;199487;199488;199489;199490;199491;199492;199493;199494;199495;199496;199497;199498;199499;199500;199501;199502 159326;159327;159328;159329;159330;159331;159332;159333;159334;159335;159336;159337;159338;159339;159340;159341;159342;159343;159344;159345;159346;159347;159348 159338 17 IIDISDVFR Unmodified 1076.5866 0.58660996 2951 Q6PI48 DARS2 Aspartate--tRNA ligase, mitochondrial yes yes 0 0 0 By MS/MS 10 0 1 1 86.32 86.478 2 0.0040478 99930 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.299 52.581 2448700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2448700 23724 2951 21682 199503 159349 159349 1 IIDKEGDDYEVIPNSNFYVSR Unmodified 2472.1809 0.18088408 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 0 1 By MS/MS By matching By MS/MS 10 0 3 1 1 1 76.943 77.106 3 0.030251 89137 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 22.375 14.929 17035000 0 0 0 0 0 0 0 4265700 0 5254600 0 7514600 0 0 0 23725 4634 21683 199504;199505;199506 159350 159350 1 IIDLEEAEDEIEDIQQEITVLSQCDSPYVTK Unmodified 3621.7131 0.71313479 5279 Q9Y6E0 STK24 Serine/threonine-protein kinase 24;Serine/threonine-protein kinase 24 36 kDa subunit;Serine/threonine-protein kinase 24 12 kDa subunit yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 103.87 97.429 3 2.6669E-67 122738 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 116.94 113.13 37358000 29321000 8037400 0 0 0 0 0 0 0 0 0 0 0 0 0 23726 5279 21684 199507;199508 159351;159352;159353 159352 3 IIDLEEAEDEIEDIQQEITVLSQCDSSYVTK Unmodified 3611.6924 0.69239934 4811 Q9P289 STK26 Serine/threonine-protein kinase 26 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.43 0.495 4 3 3 3 1 103.16 98.276 3;4 5.2044E-186 122539 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 178.85 169.05 196260000 148400000 46097000 1762000 0 0 0 0 0 0 0 0 0 0 0 0 23727 4811 21685 199509;199510;199511;199512;199513;199514;199515 159354;159355;159356;159357;159358;159359;159360;159361 159355 8 IIDLGYAK Unmodified 891.50657 0.50656873 227;253 O14920;O15111 IKBKB;CHUK Inhibitor of nuclear factor kappa-B kinase subunit beta;Inhibitor of nuclear factor kappa-B kinase subunit alpha no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 53.287 53.613 2 0.012531 61566 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 74.423 32.921 560570000 0 0 0 0 0 120980000 0 0 40972000 98744000 0 92562000 0 20894000 186410000 23728 227;253 21686 199516;199517;199518;199519;199520;199521 159362;159363 159362 2 IIDLLPK Unmodified 810.52149 0.52149051 253 O15111 CHUK Inhibitor of nuclear factor kappa-B kinase subunit alpha yes yes 0 0 0 By MS/MS By MS/MS 2.67 0.471 1 2 1 2 79.171 75.194 2 0.031008 93854 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.986 10.523 74714000 183610 74530000 0 0 0 0 0 0 0 0 0 0 0 0 0 23729 253 21687 199522;199523;199524 159364 159364 1 IIDLVLQK Unmodified 940.59572 0.59571809 282 O15397 IPO8 Importin-8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 71.613 71.659 2 0.011082 81571 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.741 24.578 37109000 0 0 0 1823800 1805500 3921700 2522200 2092100 1841100 4542200 4772000 0 2445400 3162400 8180400 23730 282 21688 199525;199526;199527;199528;199529;199530;199531;199532;199533;199534;199535 159365;159366;159367;159368;159369;159370 159368 6 IIDPDEEK Unmodified 957.46549 0.46549177 2274 Q13356 PPIL2 Peptidyl-prolyl cis-trans isomerase-like 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 23.154 23.34 2 0.023266 24766 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 60.478 32.371 50963000 0 0 0 6267600 0 5015000 0 6068600 5026700 7872300 0 9975500 10737000 0 0 23731 2274 21689 199536;199537;199538;199539;199540;199541;199542 159371;159372 159371 2 IIDPLPPIDHSEIDYPPFEK Unmodified 2334.1784 0.17836488 3199 Q86XP3 DDX42 ATP-dependent RNA helicase DDX42 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 3 1 93.622 88.914 3 2.1487E-06 110913 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.644 58.164 197150000 37928000 147820000 11406000 0 0 0 0 0 0 0 0 0 0 0 0 23732 3199 21690 199543;199544;199545;199546;199547 159373;159374;159375;159376;159377;159378;159379 159373 7 IIDRIHGTEEGQQILK Unmodified 1849.0058 0.005760665 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 59.669 51.443 3 0.0067108 69852 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.438 33.917 7049500 7049500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23733 2459 21691 199548 159380 159380 1 IIDSDEGPECHPPVK Unmodified 1691.7825 0.78248559 2160 Q08554 DSC1 Desmocollin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 2 1 1 1 1 1 1 1 36.526 36.7 2;3 0.00023002 40883 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 58.831 50.654 69102000 0 0 0 31915000 0 3970800 5662100 5112000 0 0 5875900 7932900 6765600 0 1868300 23734 2160 21692 199549;199550;199551;199552;199553;199554;199555;199556;199557 159381;159382;159383;159384 159383 3 IIDSLFNTVTDK Unmodified 1364.7187 0.71874635 425 O60701 UGDH UDP-glucose 6-dehydrogenase yes yes 0 0 0 By MS/MS 10 0 1 1 79.528 79.757 2 0.0013253 91794 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.693 61.358 9651300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9651300 23735 425 21693 199558 159385 159385 1 IIDSVRGELQK Unmodified 1256.7089 0.70885036 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7 3.87 3 5 1 1 1 1 1 1 1 1 41.403 40.209 3 0.0048872 43968 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 54.471 15.205 620640000 398630000 56769 43203000 0 0 2188500 38818000 0 0 0 0 45810000 0 37205000 54729000 23736 2392 21694 199559;199560;199561;199562;199563;199564;199565;199566 159386;159387;159388;159389;159390 159390 3 IIDTGGGFILEEEEEEEQK Unmodified 2164.0059 0.0059394035 1148 P23025 XPA DNA repair protein complementing XP-A cells yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 82.932 78.278 2 2.0621E-134 98302 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 276.97 265.93 54832000 13695000 38030000 3106900 0 0 0 0 0 0 0 0 0 0 0 0 23737 1148 21695 199567;199568;199569;199570 159391;159392;159393;159394;159395;159396 159391 6 IIDVSTVK Unmodified 873.51713 0.51713341 5153 Q9Y3B8 REXO2 Oligoribonuclease, mitochondrial yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 41.965 42.275 2 0.048796 46129 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.349 15.222 102400000 0 0 0 18524000 0 0 0 0 0 0 0 27707000 0 15888000 40280000 23738 5153 21696 199571;199572;199573;199574 159397 159397 1 IIDVVYNASNNELVR Unmodified 1717.8999 0.89989861 1877 P62241 RPS8 40S ribosomal protein S8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 1 2 2 2 76.783 76.837 2;3 2.711E-97 88727 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 193.22 157.27 818990000 0 0 0 19040000 52293000 59644000 47782000 45677000 56132000 114640000 99525000 39552000 58175000 76948000 149580000 23739 1877 21697 199575;199576;199577;199578;199579;199580;199581;199582;199583;199584;199585;199586;199587;199588;199589;199590;199591;199592;199593;199594;199595;199596;199597 159398;159399;159400;159401;159402;159403;159404;159405;159406;159407;159408;159409;159410;159411;159412;159413;159414;159415;159416;159417;159418 159407 21 IIEDCSNSEDTIK Unmodified 1522.6821 0.68210284 164 O00507 USP9Y Probable ubiquitin carboxyl-terminal hydrolase FAF-Y yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 28.488 26.747 2 0.0010967 34978 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 91.549 2.9532 26005000 9836300 0 0 0 0 0 0 0 0 7753200 0 0 8415600 0 0 23740 164 21698 199598;199599;199600;199601 159419;159420;159421;159422;159423 159421 5 IIEDCSNSEETVK Unmodified 1522.6821 0.68210284 3701 Q93008 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 27.68 27.376 2 7.1489E-18 33061 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.89 17.76 91133000 0 33252000 0 0 4031000 8422300 0 3437400 0 0 9161800 13707000 0 7999000 11122000 23741 3701 21699 199602;199603;199604;199605;199606;199607;199608;199609 159424;159425;159426;159427;159428;159429;159430;159431 159425 8 IIEDPAR Unmodified 812.43922 0.43921744 699 O95834 EML2 Echinoderm microtubule-associated protein-like 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 21.895 22.137 2 0.043924 22537 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 67.035 7.394 89312000 0 0 0 4463900 3407500 0 6074300 0 0 8614500 14724000 11337000 4881100 12167000 23643000 23742 699 21700 199610;199611;199612;199613;199614;199615;199616;199617;199618 159432 159432 1 IIEDQNQSK Unmodified 1073.5353 0.53530267 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 8.4888 8.5975 2 2.7522E-05 6856 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 139.88 85.328 137310000 0 0 0 9917200 9889400 8674000 12089000 12244000 13566000 8400500 0 17377000 21260000 8717800 15174000 23743 2556 21701 199619;199620;199621;199622;199623;199624;199625;199626;199627;199628;199629 159433;159434;159435;159436;159437;159438;159439;159440;159441;159442;159443;159444 159439 9 IIEDQQESLNK Unmodified 1315.662 0.66195975 811 P05455 SSB Lupus La protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 7.38 3.9 2 3 11 2 3 1 1 1 1 1 1 1 1 1 1 1 34.791 34.292 1;2 5.9669E-60 31599 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 195.57 141.42 1803700000 95357000 945800000 0 43153000 35987000 35783000 44641000 53197000 0 63984000 132430000 104160000 104950000 121390000 22866000 23744 811 21702 199630;199631;199632;199633;199634;199635;199636;199637;199638;199639;199640;199641;199642;199643;199644;199645 159445;159446;159447;159448;159449;159450;159451;159452;159453;159454;159455;159456;159457;159458;159459;159460;159461 159447 17 IIEDTVVPFTVSSSSADQLSTSSSMTEGSGTMNK 2 Oxidation (M) 3524.6022 0.60220413 5054 Q9UPQ0 LIMCH1 LIM and calponin homology domains-containing protein 1 yes yes 0 2 0 By MS/MS By matching By MS/MS By matching By MS/MS 7.5 3.55 1 1 4 2 1 1 1 1 83.355 82.123 3 3.0471E-27 95820 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.919 56.106 87485000 0 53722000 0 0 0 0 2257700 0 0 13031000 12143000 6332300 0 0 0 23745 5054 21703 199646;199647;199648;199649;199650;199651 159462;159463;159464;159465;159466 159466 6404;6405 5 IIEDTVVPFTVSSSSADQLSTSSSMTEGSGTMNK Oxidation (M) 3508.6073 0.60728951 5054 Q9UPQ0 LIMCH1 LIM and calponin homology domains-containing protein 1 yes yes 0 1 0 By MS/MS 2 0 1 1 87.992 83.15 3 2.1611E-34 103393 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.145 84.355 41164000 0 41164000 0 0 0 0 0 0 0 0 0 0 0 0 0 23746 5054 21703 199652 159467;159468 159468 6404;6405 2 IIEDTVVPFTVSSSSADQLSTSSSMTEGSGTMNK Unmodified 3492.6124 0.61237488 5054 Q9UPQ0 LIMCH1 LIM and calponin homology domains-containing protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 88.371 84.327 3 1.7954E-16 104756 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 59.017 53.53 45403000 0 45403000 0 0 0 0 0 0 0 0 0 0 0 0 0 23747 5054 21703 199653;199654 159469;159470;159471 159469 3 IIEESTHCGPQAVR Unmodified 1595.7726 0.77258961 671 O95602 POLR1A DNA-directed RNA polymerase I subunit RPA1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 29.041 29.24 3 0.00068092 30559 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.227 42.454 91351000 0 0 0 8487000 0 0 7073700 9120600 0 13893000 0 0 19382000 9101700 24293000 23748 671 21704 199655;199656;199657;199658;199659;199660;199661;199662 159472;159473;159474;159475;159476;159477;159478 159474 7 IIEFVPTK Unmodified 945.55352 0.55351892 2231 Q13085 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 64.216 64.08 2 0.018722 73146 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 64.207 21.733 32568000 0 0 0 0 7158600 15634000 9775700 0 0 0 0 0 0 0 0 23749 2231 21705 199663;199664;199665;199666 159479;159480;159481 159480 2 IIEGEPNLK Unmodified 1011.5601 0.56006086 746 P01833 PIGR Polymeric immunoglobulin receptor;Secretory component yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 40.362 40.348 2 0.0052256 44653 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 79.713 46.9 86345000 0 0 0 5667700 2972200 5297000 5329100 4244500 0 56012000 6822700 0 0 0 0 23750 746 21706 199667;199668;199669;199670;199671;199672;199673;199674;199675 159482;159483;159484;159485;159486;159487;159488;159489 159483 8 IIEGGAAHK Unmodified 894.49232 0.49231565 2213 Q12959;P78352 DLG1;DLG4 Disks large homolog 1;Disks large homolog 4 yes no 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 8.0718 5.3344 2 0.040102 8002 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.76 24.954 29250000 0 18767000 10483000 0 0 0 0 0 0 0 0 0 0 0 0 23751 2213 21707 199676;199677 159490;159491 159490 2 IIEGTEVVQEIQNK Unmodified 1598.8516 0.85155143 4024 Q99570 PIK3R4 Phosphoinositide 3-kinase regulatory subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.56 3.03 4 1 22 3 2 2 2 2 2 1 2 2 2 2 2 1 2 72.468 71.802 2;3 0.000342 83340 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 96.015 68.9 585360000 0 402240000 4094000 8477400 10098000 19267000 13257000 5577100 10987000 19879000 17823000 22861000 13186000 9251400 28365000 23752 4024 21708 199678;199679;199680;199681;199682;199683;199684;199685;199686;199687;199688;199689;199690;199691;199692;199693;199694;199695;199696;199697;199698;199699;199700;199701;199702;199703;199704 159492;159493;159494;159495;159496;159497;159498 159497 5 IIEHNIRNDK Unmodified 1250.6731 0.67313356 3143 Q86U86 PBRM1 Protein polybromo-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 10.231 10.375 3 0.0054351 6962 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 50.108 32.896 66647000 0 0 0 7503800 0 11678000 12301000 0 0 0 8448400 12227000 0 0 14488000 23753 3143 21709 199705;199706;199707;199708;199709;199710 159499;159500 159500 1 IIEIEDEAEK Unmodified 1187.5921 0.59214885 2370 Q14134 TRIM29 Tripartite motif-containing protein 29 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.29 3.28 3 11 2 1 1 1 1 1 1 1 1 1 1 1 1 47.471 46.094 2 0.00090505 53447 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 115.71 72.468 471480000 15198000 178170000 0 40978000 16481000 19852000 21901000 31039000 16142000 27960000 28370000 0 24827000 18100000 32457000 23754 2370 21710 199711;199712;199713;199714;199715;199716;199717;199718;199719;199720;199721;199722;199723;199724 159501;159502;159503;159504;159505;159506;159507;159508;159509;159510;159511;159512;159513;159514;159515;159516 159501 16 IIELEQK Unmodified 871.50148 0.50148335 2746 Q5M775 SPECC1 Cytospin-B yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 50.993 44.159 2 0.040529 57796 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.462 9.3212 70102000 7819800 62282000 0 0 0 0 0 0 0 0 0 0 0 0 0 23755 2746 21711 199725;199726 159517 159517 1 IIELPFQNK Unmodified 1100.623 0.62299547 1383 P36952 SERPINB5 Serpin B5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 78.932 77.81 2 0.0028982 89833 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 124.83 90.027 4227500000 831530000 1948000000 117380000 78896000 46958000 165900000 79382000 96712000 49874000 134490000 121780000 120160000 77891000 105480000 253120000 23756 1383 21712 199727;199728;199729;199730;199731;199732;199733;199734;199735;199736;199737;199738;199739;199740;199741;199742 159518;159519;159520;159521;159522;159523;159524;159525;159526;159527;159528;159529;159530;159531;159532;159533;159534 159518 17 IIENAENEYQTAISENYQTMSDTTFK Oxidation (M) 3055.3604 0.36044094 1705 P52907 CAPZA1 F-actin-capping protein subunit alpha-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 7.7 3.52 2 1 7 2 1 1 1 1 1 1 1 1 77.114 76.026 3 1.3152E-120 92619 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 156.88 148.71 508450000 0 433460000 9347600 4616400 6892400 4969800 0 0 0 20693000 11216000 7617800 0 0 9632300 23757 1705 21713 199743;199744;199745;199746;199747;199748;199749;199750;199751;199752 159535;159536;159537;159538;159539;159540;159541;159542 159536 2754 8 IIENAENEYQTAISENYQTMSDTTFK Unmodified 3039.3655 0.36552632 1705 P52907 CAPZA1 F-actin-capping protein subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 84.894 81.41 3 4.629E-108 100742 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 151.47 148.37 1005900000 0 995770000 10137000 0 0 0 0 0 0 0 0 0 0 0 0 23758 1705 21713 199753;199754;199755 159543;159544;159545 159543 3 IIENELEGFGIR Unmodified 1388.73 0.72997974 5092 Q9Y295 DRG1 Developmentally-regulated GTP-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.89 80.95 2 1.0115E-05 93242 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 137.85 87.811 90994000 0 0 0 1450000 2958000 8091800 4693900 4906500 4497100 11733000 9991200 9493700 4498200 8155800 20524000 23759 5092 21714 199756;199757;199758;199759;199760;199761;199762;199763;199764;199765;199766;199767 159546;159547;159548;159549;159550;159551;159552;159553;159554;159555;159556;159557 159549 12 IIENGENEK Unmodified 1044.5088 0.50875357 5153 Q9Y3B8 REXO2 Oligoribonuclease, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.36 3.15 2 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 9.5376 8.8049 2 0.0015888 11829 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 135 47.818 164690000 18854000 121800000 0 3621600 891900 2067400 1194400 882880 881430 1158000 0 0 1200400 3016000 9123500 23760 5153 21715 199768;199769;199770;199771;199772;199773;199774;199775;199776;199777;199778;199779;199780;199781 159558;159559;159560;159561;159562;159563;159564 159562 7 IIEPDNSYISDTLGQVYK Unmodified 2054.0208 0.020801607 2745 Q5K651 SAMD9 Sterile alpha motif domain-containing protein 9 yes yes 0 0 0 By MS/MS 2 0 1 1 89.582 84.709 2 1.6812E-15 105385 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.22 97.055 74800000 0 74800000 0 0 0 0 0 0 0 0 0 0 0 0 0 23761 2745 21716 199782 159565 159565 0 IIEPIQSR Unmodified 954.54983 0.54983053 1348 P35250 RFC2 Replication factor C subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.953 39.133 2 0.0082715 42859 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 123.69 65.522 758170000 0 0 0 38546000 42887000 56677000 48026000 49574000 40660000 72570000 77805000 96731000 72537000 58907000 103250000 23762 1348 21717 199783;199784;199785;199786;199787;199788;199789;199790;199791;199792;199793;199794 159566;159567;159568;159569;159570;159571;159572;159573;159574;159575 159573 8 IIEPLTSR Unmodified 927.53893 0.53893149 1347 P35249 RFC4 Replication factor C subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 2 1 1 1 1 1 1 1 2 45.832 46.033 2 0.0044044 50881 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 109.01 34.597 743620000 0 0 0 30899000 43669000 43891000 86708000 52007000 35196000 63815000 55915000 61164000 53123000 64189000 153050000 23763 1347 21718 199795;199796;199797;199798;199799;199800;199801;199802;199803;199804;199805;199806;199807;199808 159576;159577;159578;159579;159580;159581;159582;159583;159584;159585;159586;159587;159588;159589;159590;159591;159592;159593;159594;159595;159596;159597;159598;159599;159600;159601 159601 26 IIEQLSPQAATSR Unmodified 1412.7623 0.7623425 2097;913 Q03468;P0DP91 ERCC6 DNA excision repair protein ERCC-6 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.018 51.17 2 1.5293E-09 58684 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 129.82 104.2 315240000 0 0 0 21456000 22627000 20593000 23673000 16345000 22754000 31274000 30711000 37673000 23878000 24090000 40169000 23764 2097;913 21719 199809;199810;199811;199812;199813;199814;199815;199816;199817;199818;199819;199820 159602;159603;159604;159605;159606;159607;159608;159609;159610;159611;159612;159613;159614 159612 13 IIESIIEESQK Unmodified 1287.6922 0.69219725 2734 Q5JSH3 WDR44 WD repeat-containing protein 44 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.94 3.84 6 1 11 1 4 2 1 1 1 1 1 1 1 1 1 1 1 64.997 62.206 2;3 1.6581E-09 80069 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 144.77 41.224 1163400000 27177000 989730000 41716000 0 0 0 0 0 0 9030800 23016000 22195000 9849900 13319000 27362000 23765 2734 21720 199821;199822;199823;199824;199825;199826;199827;199828;199829;199830;199831;199832;199833;199834;199835;199836;199837;199838 159615;159616;159617;159618;159619;159620;159621;159622;159623;159624;159625;159626;159627;159628;159629;159630;159631;159632;159633;159634;159635;159636 159619 21 IIETLTQQLQAK Unmodified 1384.7926 0.79257999 4910 Q9UHV9 PFDN2 Prefoldin subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 69.648 68.388 2 9.2247E-34 78530 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 171.56 116 1357600000 39713000 997020000 17728000 8213100 9453100 10748000 13621000 12982000 9542100 20298000 41667000 41994000 14408000 31496000 88677000 23766 4910 21721 199839;199840;199841;199842;199843;199844;199845;199846;199847;199848;199849;199850;199851;199852;199853;199854 159637;159638;159639;159640;159641;159642;159643;159644;159645;159646;159647;159648;159649;159650;159651;159652;159653;159654;159655;159656;159657;159658 159639 21 IIEVAPQVATQNVNPTPGATS Unmodified 2106.0957 0.095697884 1610 P49903 SEPHS1 Selenide, water dikinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 1 1 2 2 2 2 2 76.74 76.791 2;3 1.0552E-05 88710 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 77.185 77.185 250980000 0 0 0 8538100 7290100 23647000 13573000 10238000 3663300 10477000 34691000 31716000 15947000 31434000 59766000 23767 1610 21722 199855;199856;199857;199858;199859;199860;199861;199862;199863;199864;199865;199866;199867;199868;199869;199870;199871;199872;199873;199874;199875;199876 159659;159660;159661;159662;159663;159664 159663 6 IIEVGDTPK Unmodified 970.53351 0.53351176 1854 P61619;Q9H9S3 SEC61A1;SEC61A2 Protein transport protein Sec61 subunit alpha isoform 1;Protein transport protein Sec61 subunit alpha isoform 2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 38.531 37.885 2 0.0034522 42009 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 94.302 57.282 229750000 0 40259000 0 21107000 14606000 11439000 16273000 23314000 11141000 16618000 15592000 29400000 14779000 15224000 0 23768 1854 21723 199877;199878;199879;199880;199881;199882;199883;199884;199885;199886;199887;199888;199889;199890 159665;159666;159667;159668;159669;159670;159671;159672;159673;159674;159675;159676;159677 159672 12 IIEVNQNQK Unmodified 1084.5877 0.58767259 261 O15164 TRIM24 Transcription intermediary factor 1-alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.498 22.704 2 0.0036202 23881 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 95.352 64.716 164590000 0 0 0 7818600 7854300 11941000 10118000 8224600 8084600 14894000 19242000 24968000 15521000 17611000 18318000 23769 261 21724 199891;199892;199893;199894;199895;199896;199897;199898;199899;199900;199901;199902 159678;159679;159680;159681;159682;159683;159684;159685;159686;159687;159688;159689 159678 11 IIEVSGQK Unmodified 872.49673 0.49673232 1834 P61106 RAB14 Ras-related protein Rab-14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.322 22.527 2 0.0042848 22271 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 111.65 28.271 820600000 0 0 0 43504000 33534000 44334000 48333000 55291000 34035000 84862000 101480000 112960000 77521000 68123000 116620000 23770 1834 21725 199903;199904;199905;199906;199907;199908;199909;199910;199911;199912;199913;199914 159690;159691;159692;159693;159694;159695;159696;159697;159698;159699;159700;159701;159702 159698 12 IIEVVDAIMTTAQSHQR Oxidation (M) 1926.9833 0.98331066 2064 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 75.73 75.898 3 0.0012518 87273 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.513 23.596 60482000 0 0 0 0 0 0 4244700 12670000 0 13078000 0 0 5521700 0 24968000 23771 2064 21726 199915;199916;199917;199918;199919 159703 159703 3350 1 IIEVVDAIMTTAQSHQR Unmodified 1910.9884 0.98839604 2064 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type yes yes 0 0 0 By MS/MS 10 0 1 1 86.433 86.591 3 0.0050411 100110 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.463 39.406 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23772 2064 21726 199920 159704 159704 1 IIEVVEANYPETLGR Unmodified 1701.8938 0.8937506 3609 Q92503 SEC14L1 SEC14-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.245 78.305 2 6.445E-71 90384 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 207.88 150.28 530540000 0 0 0 12728000 36071000 37020000 30652000 48302000 33036000 79877000 49427000 71819000 33701000 41241000 56669000 23773 3609 21727 199921;199922;199923;199924;199925;199926;199927;199928;199929;199930;199931;199932 159705;159706;159707;159708;159709;159710;159711;159712;159713;159714;159715;159716 159705 12 IIFIDSTWNQTNK Unmodified 1578.8042 0.80420731 3344 Q8N5C7 DTWD1 DTW domain-containing protein 1 yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 84.872 78.447 2 0.0024841 102250 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.813 69.636 38183000 6255100 31928000 0 0 0 0 0 0 0 0 0 0 0 0 0 23774 3344 21728 199933;199934 159717 159717 1 IIFMASK Oxidation (M) 824.44661 0.44661101 5231 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 1 0 By matching By MS/MS By MS/MS 2 0 3 1 1 1 43.3 38.073 2 0.045081 47753 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 76.035 35.672 87121000 48105000 25217000 13798000 0 0 0 0 0 0 0 0 0 0 0 0 23775 5231 21729 199935;199936;199937 159718 159718 1 IIFSEHLPLSK Unmodified 1282.7285 0.72852317 5110 Q9Y2L1 DIS3 Exosome complex exonuclease RRP44 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74.925 73.943 3 0.00046911 94418 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.777 76.046 319210000 81788000 32126000 2576700 7078200 5717400 35347000 9205500 8472000 12318000 17654000 18659000 19208000 13048000 18909000 37100000 23776 5110 21730 199938;199939;199940;199941;199942;199943;199944;199945;199946;199947;199948;199949;199950;199951;199952 159719;159720;159721;159722;159723;159724;159725;159726;159727;159728;159729;159730 159722 12 IIFSPVAPK Unmodified 970.58515 0.5851534 271 O15294 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.822 66.905 2 0.0064261 77139 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 75.109 53.428 460020000 0 0 0 20115000 21082000 35474000 29420000 29873000 26354000 41853000 50462000 57280000 43346000 40175000 64590000 23777 271 21731 199953;199954;199955;199956;199957;199958;199959;199960;199961;199962;199963;199964 159731;159732;159733;159734;159735;159736;159737;159738;159739;159740;159741;159742;159743 159743 13 IIFVDEVFK Unmodified 1108.6168 0.61684746 4002 Q96T88 UHRF1 E3 ubiquitin-protein ligase UHRF1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 87.329 87.326 2 0.012702 100892 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.91 32.398 17468000 0 0 0 0 2506700 5033300 0 0 0 0 0 0 0 0 9928100 23778 4002 21732 199965;199966;199967;199968;199969;199970 159744;159745;159746;159747 159745 4 IIFVVGGPGSGK Unmodified 1129.6495 0.64954457 734 P00568 AK1 Adenylate kinase isoenzyme 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.53 2.94 1 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 72.024 71.04 2 1.8528E-05 92161 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 109.02 83.722 530470000 191200000 37247000 0 13737000 10080000 33402000 20711000 13391000 11638000 26221000 28627000 32724000 16053000 22354000 73089000 23779 734 21733 199971;199972;199973;199974;199975;199976;199977;199978;199979;199980;199981;199982;199983;199984;199985 159748;159749;159750;159751;159752;159753;159754;159755;159756;159757;159758;159759;159760;159761;159762;159763 159756 12 IIFYSLIK Unmodified 995.60555 0.60555449 3282 Q8IYB8 SUPV3L1 ATP-dependent RNA helicase SUPV3L1, mitochondrial yes yes 0 0 0 By MS/MS 10 0 1 1 78.011 78.186 2 0.020541 89891 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 62.714 1.9264 4515500 0 0 0 0 0 0 0 0 4515500 0 0 0 0 0 0 23780 3282 21734 199986 159764 159764 1 IIGATDSCGDLMFLMK 2 Oxidation (M) 1802.8253 0.82527838 1487 P45973 CBX5 Chromobox protein homolog 5 yes yes 0 2 0 By MS/MS 2.5 0.5 1 1 2 82.17 78.168 2 0.014485 97267 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 48.284 31.934 18602000 0 18602000 0 0 0 0 0 0 0 0 0 0 0 0 0 23781 1487 21735 199987;199988 159765 159765 2332;2333 1 IIGATDSSGELMFLMK 2 Oxidation (M) 1743.8423 0.84230866 2249;2009 Q13185;P83916 CBX3;CBX1 Chromobox protein homolog 3;Chromobox protein homolog 1 no no 0 2 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.308 79.365 2 5.4882E-24 91754 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 120.96 94.287 242300000 0 0 0 15485000 17386000 20031000 15233000 15742000 12375000 0 41396000 42239000 20904000 27946000 13564000 23782 2249;2009 21736 199989;199990;199991;199992;199993;199994;199995;199996;199997;199998;199999 159766;159767;159768;159769;159770;159771;159772 159772 3259;3260 7 IIGATDSSGELMFLMK Oxidation (M) 1727.8474 0.84739403 2249;2009 Q13185;P83916 CBX3;CBX1 Chromobox protein homolog 3;Chromobox protein homolog 1 no no 0 1 0 By MS/MS 10 0 1 1 83.44 83.63 2 0.0043799 96589 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.418 45.99 9905600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9905600 23783 2249;2009 21736 200000 159773 159773 3259;3260 0 IIGAVDQIQLTQAQLEER Unmodified 2024.0902 0.090218576 2911 Q6NZI2 PTRF Polymerase I and transcript release factor yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 2 1 1 1 81.577 81.645 2;3 4.6212E-145 94182 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 172.2 157.01 321170000 0 0 0 6515800 27097000 27795000 11791000 18771000 20509000 43335000 36111000 57561000 13481000 21437000 36764000 23784 2911 21737 200001;200002;200003;200004;200005;200006;200007;200008;200009;200010;200011;200012;200013 159774;159775;159776;159777;159778;159779;159780;159781;159782;159783 159777 7 IIGDASTQTDALK Unmodified 1331.6933 0.69325988 2834 Q5VZL5 ZMYM4 Zinc finger MYM-type protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 44.066 42.946 2 4.6886E-07 48395 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 96.113 55.084 160770000 0 79947000 0 5839100 10502000 0 0 8230300 0 15247000 13301000 0 14831000 12870000 0 23785 2834 21738 200014;200015;200016;200017;200018;200019;200020;200021;200022;200023;200024;200025 159784;159785;159786;159787;159788;159789;159790;159791;159792;159793;159794;159795;159796 159793 13 IIGDAYLK Unmodified 891.50657 0.50656873 5102 Q9Y2H2 INPP5F Phosphatidylinositide phosphatase SAC2 yes yes 0 0 0 By MS/MS 10 0 1 1 53.156 53.571 2 0.015415 60520 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 68.915 3.6628 121440000 0 0 0 0 0 0 0 0 0 0 121440000 0 0 0 0 23786 5102 21739 200026 159797 159797 1 IIGDTFVK Unmodified 891.50657 0.50656873 1612 P49915 GMPS GMP synthase [glutamine-hydrolyzing] yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 6.1 3.91 4 1 5 1 3 1 1 1 1 1 1 56.675 53.809 1;2 0.011648 69144 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.74 31.116 3743100000 193720000 3285300000 4279400 38943000 35091000 0 0 0 0 0 0 0 75150000 94624000 16040000 23787 1612 21740 200027;200028;200029;200030;200031;200032;200033;200034;200035;200036 159798;159799;159800;159801;159802;159803 159800 6 IIGDYFSDQDPR Unmodified 1424.6572 0.65720872 3871 Q96HW7 INTS4 Integrator complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 64.474 64.522 2 0.0009629 73902 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 72.006 49.225 62510000 0 0 0 3081300 3671100 5120300 6152600 6195800 4790100 5381600 5786000 9009300 7564600 5756900 0 23788 3871 21741 200037;200038;200039;200040;200041;200042;200043;200044;200045;200046;200047 159804;159805;159806;159807;159808;159809;159810 159804 6 IIGEDSPSR Unmodified 972.48762 0.4876242 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.08 20.281 2 0.011616 19637 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.546 27.738 66740000 0 0 0 4324500 4067500 4116900 4445300 3599900 3767800 7060000 7066500 7954400 5634900 5772900 8929400 23789 5262 21742 200048;200049;200050;200051;200052;200053;200054;200055;200056;200057;200058;200059 159811;159812;159813;159814;159815;159816;159817;159818 159813 8 IIGEDSPSRLDR Unmodified 1356.6997 0.69974224 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 2 1 1 1 34.544 34.706 3 0.00022171 38713 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 83.045 41.341 295760000 0 0 0 15228000 15086000 29000000 17805000 25758000 18981000 27849000 55850000 38038000 30598000 21563000 0 23790 5262 21743 200060;200061;200062;200063;200064;200065;200066;200067;200068;200069;200070;200071 159819;159820;159821;159822;159823;159824;159825;159826;159827;159828;159829;159830 159829 9 IIGIMEEVADGFK Oxidation (M) 1436.7221 0.72211717 1694 P52701 MSH6 DNA mismatch repair protein Msh6 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS 5.73 3.91 5 1 5 1 3 2 1 1 1 1 1 80.975 78.645 2 9.2359E-18 97706 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.17 92.222 182360000 14655000 111790000 19362000 0 2699900 13326000 0 0 0 5840200 8467500 0 0 0 6218600 23791 1694 21744 200072;200073;200074;200075;200076;200077;200078;200079;200080;200081;200082 159831;159832;159833;159834;159835;159836;159837 159831 2743 6 IIGIMEEVADGFK Unmodified 1420.7272 0.72720254 1694 P52701 MSH6 DNA mismatch repair protein Msh6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.43 2.72 4 2 1 2 2 2 1 93.553 90.055 2 0.00046347 109518 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 95.573 91.107 236700000 118140000 112940000 3840900 0 0 0 0 0 0 0 0 0 0 0 1784400 23792 1694 21744 200083;200084;200085;200086;200087;200088;200089 159838;159839;159840;159841;159842;159843;159844 159840 6 IIGLDQVAGMSETALPGAFK Oxidation (M) 2033.0503 0.050327596 1356 P35579 MYH9 Myosin-9 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 16 1 2 1 2 1 1 2 2 1 1 1 1 87.08 87.148 2;3 5.2252E-53 101002 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 118.52 111.16 666550000 0 0 0 3920900 49912000 34641000 23765000 33215000 21830000 157310000 109920000 73087000 19340000 38319000 101280000 23793 1356 21745 200090;200091;200092;200093;200094;200095;200096;200097;200098;200099;200100;200101;200102;200103;200104;200105 159845;159846;159847;159848;159849;159850;159851;159852;159853;159854;159855;159856;159857 159845 2073 10 IIGLDQVAGMSETALPGAFK Unmodified 2017.0554 0.055412974 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 92.918 93.071 2 0.0020941 107878 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.122 42.217 11271000 0 0 0 0 0 0 0 0 0 3893800 2039000 0 0 0 5337900 23794 1356 21745 200106;200107;200108 159858 159858 1 IIGLKPEGVPR Unmodified 1177.7183 0.71829284 1744 P54709 ATP1B3 Sodium/potassium-transporting ATPase subunit beta-3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.257 52.404 3 0.0052561 58065 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 46.955 36.851 227340000 0 0 0 10348000 13152000 17444000 18453000 17148000 11377000 19398000 22521000 27171000 23360000 20540000 26428000 23795 1744 21746 200109;200110;200111;200112;200113;200114;200115;200116;200117;200118;200119;200120 159859;159860;159861;159862;159863 159862 2 IIGNLLYYR Unmodified 1123.639 0.63897988 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.978 78.038 2 2.4646E-50 90651 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 192.28 143.78 758040000 0 0 0 39371000 34532000 91169000 48146000 56971000 54629000 72203000 52526000 76021000 43929000 51102000 137440000 23796 1518 21747 200121;200122;200123;200124;200125;200126;200127;200128;200129;200130;200131;200132 159864;159865;159866;159867;159868;159869;159870;159871;159872;159873;159874;159875;159876 159875 13 IIGVDINK Unmodified 870.51747 0.51746776 955 P11766 ADH5 Alcohol dehydrogenase class-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 46.891 47.454 2 0.0083611 55462 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.472 41.941 270080000 0 0 0 0 0 0 0 0 0 0 0 135150000 0 34039000 100900000 23797 955 21748 200133;200134;200135;200136 159877;159878;159879;159880 159877 4 IIGVHQEDELLECLSPATSR Unmodified 2266.1263 0.12634609 3702 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 88.28 81.793 3 1.4512E-05 104265 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.265 55.219 24920000 11340000 13579000 0 0 0 0 0 0 0 0 0 0 0 0 0 23798 3702 21749 200137;200138 159881;159882 159882 2 IIGYGLPFPK Unmodified 1103.6379 0.63791725 4868 Q9UDY4 DNAJB4 DnaJ homolog subfamily B member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 83.244 83.379 2 0.0056791 96593 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 67.981 42.042 108230000 0 0 0 0 0 5883400 3705000 6506900 0 10275000 7288000 12871000 5790700 12005000 43903000 23799 4868 21750 200139;200140;200141;200142;200143;200144;200145;200146;200147 159883;159884;159885;159886;159887;159888;159889;159890;159891;159892 159883 10 IIHEDGYSEDECK Unmodified 1593.6617 0.66170175 872 P08754 GNAI3 Guanine nucleotide-binding protein G(k) subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching 8.31 3.1 1 2 10 3 1 1 1 1 1 1 1 1 1 1 23.893 23.143 2;3 0.0023195 23305 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 38.178 33.376 101170000 0 62814000 0 0 0 3087100 2451000 3381200 1628000 2741600 3644100 6749200 5269400 6563000 2841900 23800 872 21751 200148;200149;200150;200151;200152;200153;200154;200155;200156;200157;200158;200159;200160 159893;159894;159895;159896;159897 159896 4 IIHGSESMDSGISLDNSYK Oxidation (M) 2067.9419 0.94189936 1458 P42574 CASP3 Caspase-3;Caspase-3 subunit p17;Caspase-3 subunit p12 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 54.122 49.258 3 3.3512E-06 64070 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.144 74.356 113150000 0 99717000 13432000 0 0 0 0 0 0 0 0 0 0 0 0 23801 1458 21752 200161;200162 159898;159899 159898 2290 2 IIHGSESMDSGISLDNSYK Unmodified 2051.947 0.94698474 1458 P42574 CASP3 Caspase-3;Caspase-3 subunit p17;Caspase-3 subunit p12 yes yes 0 0 0 By MS/MS 2 0 1 1 66.272 60.354 3 1.1663E-68 77287 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.77 101.11 39214000 0 39214000 0 0 0 0 0 0 0 0 0 0 0 0 0 23802 1458 21752 200163 159900;159901 159901 2 IIHGTASYK Unmodified 988.53418 0.53418046 2398 Q14244 MAP7 Ensconsin yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.081 14.244 2 0.045396 13416 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 43.218 21.537 46670000 0 0 0 2090900 2843200 3747000 2648000 2185900 2619300 5346700 5990600 6063700 4807800 2739000 5587900 23803 2398 21753 200164;200165;200166;200167;200168;200169;200170;200171;200172;200173;200174;200175 159902 159902 1 IIHQAHK Unmodified 845.48717 0.48717069 2669 Q3KRA6 C2orf76 UPF0538 protein C2orf76 yes yes 0 0 0 By MS/MS 2 0 1 1 1.0637 -2.2239 2 0.03207 1274 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.935 86.935 12575000 12575000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23804 2669 21754 200176 159903 159903 1 IIHRNDGAENSCTER Unmodified 1770.8067 0.80674328 5244 Q9Y5Q8 GTF3C5 General transcription factor 3C polypeptide 5 yes yes 0 0 1 By matching By matching By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 7 7.2385 3 0.00017652 4168 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 68.044 61.607 18985000 0 0 0 0 0 0 0 0 2332000 2636200 4411300 0 3396500 2916100 3293100 23805 5244 21755 200177;200178;200179;200180;200181;200182 159904;159905 159905 2 IIHTSVWAGQK Unmodified 1238.6772 0.6771563 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 41.17 40.728 2;3 0.00049335 44711 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 58.63 50.222 250850000 15327000 0 0 9397900 6376100 17112000 12918000 21292000 12700000 19211000 19182000 26119000 24087000 28161000 38968000 23806 2930 21756 200183;200184;200185;200186;200187;200188;200189;200190;200191;200192;200193;200194;200195 159906;159907;159908;159909;159910;159911;159912;159913;159914;159915 159912 7 IIIAEVVNK Unmodified 997.61718 0.61718181 367 O43795 MYO1B Unconventional myosin-Ib yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.431 62.529 2 0.0061887 70959 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 75.738 37.5 153260000 0 0 0 8693500 14059000 11410000 11285000 13778000 9195400 13977000 13980000 21120000 12254000 9190600 14313000 23807 367 21757 200196;200197;200198;200199;200200;200201;200202;200203;200204;200205;200206;200207 159916;159917;159918;159919;159920;159921;159922;159923;159924;159925;159926;159927 159925 12 IIIEPGFLFTTAK Unmodified 1448.8279 0.82790287 610 O94964 SOGA1 Protein SOGA1;N-terminal form;C-terminal 80 kDa form yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 92.945 93.074 2 0.012516 107880 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.001 23.221 4193900 0 0 0 0 0 0 0 0 0 1501100 0 0 0 0 2692800 23808 610 21758 200208;200209 159928 159928 1 IIILDEADSMTDGAQQALRR Oxidation (M) 2231.1216 0.12159506 1348 P35250 RFC2 Replication factor C subunit 2 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 73.052 73.25 3 1.4324E-05 83816 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.278 37.335 115350000 0 0 0 0 0 26823000 0 12280000 16253000 0 0 30317000 0 0 29675000 23809 1348 21759 200210;200211;200212;200213;200214 159929;159930;159931;159932;159933 159930 2048 5 IIINPSSSLLASQDETK Unmodified 1814.9626 0.96255845 4696 Q9NWF9 RNF216 E3 ubiquitin-protein ligase RNF216 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.421 77.479 2 0.00057663 88592 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 56.956 33.58 56215000 0 0 0 2248500 2731700 3854800 3786400 3215800 3325900 8261000 5185600 4607500 4542600 3476100 10979000 23810 4696 21760 200215;200216;200217;200218;200219;200220;200221;200222;200223;200224;200225;200226 159934;159935;159936;159937;159938;159939;159940;159941;159942;159943 159940 10 IIIPEIQK Unmodified 952.59572 0.59571809 1754 P55060 CSE1L Exportin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.05 3.38 4 1 15 2 2 1 1 2 1 1 1 1 2 1 1 1 1 2 71.745 70.404 2 0.0050554 88394 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.93 33.018 6130300000 234570000 4077900000 169300000 38768000 180500000 165000000 64708000 48783000 39378000 329700000 93609000 112170000 69198000 94463000 412210000 23811 1754 21761 200227;200228;200229;200230;200231;200232;200233;200234;200235;200236;200237;200238;200239;200240;200241;200242;200243;200244;200245;200246 159944;159945;159946;159947;159948;159949;159950;159951;159952;159953;159954;159955;159956;159957;159958;159959;159960;159961 159949 16 IIIPPFLAYGEK Unmodified 1359.7802 0.78022439 3744 Q96AY3 FKBP10 Peptidyl-prolyl cis-trans isomerase FKBP10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 94.625 93.462 2 0.00083371 108679 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 79.148 59.362 182090000 51958000 39344000 1779900 0 2345200 10064000 2996700 3727500 3524700 13840000 7108300 7872700 3102900 7213700 27217000 23812 3744 21762 200247;200248;200249;200250;200251;200252;200253;200254;200255;200256;200257;200258;200259;200260;200261 159962;159963;159964;159965;159966;159967;159968;159969;159970;159971;159972;159973;159974;159975;159976;159977;159978;159979 159963 17 IIIPQDVGLTILK Unmodified 1421.8858 0.8857521 315 O43301 HSPA12A Heat shock 70 kDa protein 12A yes yes 0 0 0 By MS/MS 10 0 1 1 91.648 91.785 2 0.024753 106314 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.424 30.39 1354500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1354500 23813 315 21763 200262 159980 159980 1 IIISDIDGTITK Unmodified 1287.7286 0.72858275 3616 Q92539 LPIN2 Phosphatidate phosphatase LPIN2 yes yes 0 0 0 By MS/MS 10 0 1 1 79.631 79.743 2 0.037166 91389 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 35.511 5.1625 3156400 0 0 0 0 0 0 0 0 0 0 0 0 0 3156400 0 23814 3616 21764 200263 159981 159981 1 IIITEDGEFK Unmodified 1163.6074 0.60740498 1179 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 61.488 61.74 2 0.0054527 70245 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 79.906 36.66 45401000 0 0 0 0 0 3128900 2630400 2820200 2513100 0 6014700 6921900 4306600 4833900 12231000 23815 1179 21765 200264;200265;200266;200267;200268;200269;200270;200271;200272;200273 159982;159983;159984;159985;159986;159987;159988;159989 159986 7 IIKPDPEDLQLDK Unmodified 1522.8243 0.82427405 2769 Q5T1V6 DDX59 Probable ATP-dependent RNA helicase DDX59 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 65.595 64.864 3 0.0020719 83677 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.456 57.535 226830000 0 82816000 0 0 9025200 17737000 13240000 0 9546100 11949000 13197000 21600000 11848000 15288000 20578000 23816 2769 21766 200274;200275;200276;200277;200278;200279;200280;200281;200282;200283;200284;200285 159990;159991;159992;159993;159994;159995 159990 3 IILAAFR Unmodified 802.50651 0.50650915 4917 Q9UI12 ATP6V1H V-type proton ATPase subunit H yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 71.73 71.85 2 0.025324 81744 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.999 32.757 42698000 0 0 0 3162100 0 5120800 2838600 2886100 1610800 4607200 3446000 4288800 2736800 3591500 8409600 23817 4917 21767 200286;200287;200288;200289;200290;200291;200292;200293;200294;200295;200296 159996 159996 1 IILDLISESPIK Unmodified 1339.7963 0.79626839 1868 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.11 3.81 1 4 2 12 4 2 1 1 1 1 1 1 1 1 1 1 1 1 1 92.479 91.123 2;3 4.492E-24 113401 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 170.99 129.97 5701200000 1850000000 2186400000 893740000 8152400 21494000 69058000 28137000 29663000 37103000 151310000 0 92532000 29601000 68211000 235860000 23818 1868 21768 200297;200298;200299;200300;200301;200302;200303;200304;200305;200306;200307;200308;200309;200310;200311;200312;200313;200314;200315 159997;159998;159999;160000;160001;160002;160003;160004;160005;160006;160007;160008;160009;160010;160011;160012;160013;160014;160015;160016;160017;160018;160019;160020;160021;160022;160023;160024;160025;160026;160027 160013 31 IILDNLQAK Unmodified 1026.6073 0.6073454 16 A3KMH1 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 0 0 0 By matching By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 58.848 58.753 2 0.019448 66283 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 53.968 29.045 20591000 0 0 0 2561100 3146200 2363600 0 0 0 3052100 0 9468100 0 0 0 23819 16 21769 200316;200317;200318;200319;200320 160028 160028 1 IILEAALQAAK Unmodified 1139.6914 0.69140938 2155 Q08378 GOLGA3 Golgin subfamily A member 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 81.513 76.828 2 0.0031633 98118 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.033 47.993 129840000 84287000 40786000 4768300 0 0 0 0 0 0 0 0 0 0 0 0 23820 2155 21770 200321;200322;200323;200324 160029;160030;160031;160032 160031 4 IILEAEK Unmodified 814.48002 0.48001963 2524 Q15382 RHEB GTP-binding protein Rheb yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 35.313 35.484 2 0.01917 38575 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 110.61 10.545 325400000 0 0 0 19765000 16689000 32405000 23547000 20814000 16334000 41152000 35916000 41882000 24839000 0 52059000 23821 2524 21771 200325;200326;200327;200328;200329;200330;200331;200332;200333;200334;200335 160033;160034;160035;160036;160037;160038;160039;160040 160036 8 IILEHVSTWR Unmodified 1252.6928 0.69280637 4785 Q9P000 COMMD9 COMM domain-containing protein 9 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 63.054 63.367 3 0.026321 71482 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.254 21.329 20392000 0 0 0 0 0 0 0 0 0 4105900 1762000 0 0 2530800 11993000 23822 4785 21772 200336;200337;200338;200339 160041;160042 160041 2 IILEPMDLK Oxidation (M) 1086.5995 0.59948283 3143 Q86U86 PBRM1 Protein polybromo-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.58 1.79 1 18 1 2 2 2 2 1 2 2 1 2 1 1 65.695 65.739 2 0.0050367 75696 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 71.877 25.507 75694000 0 0 0 6255000 5868900 0 8418500 6555900 3062600 10949000 10985000 5034800 8372200 4744200 5448300 23823 3143 21773 200340;200341;200342;200343;200344;200345;200346;200347;200348;200349;200350;200351;200352;200353;200354;200355;200356;200357;200358 160043;160044;160045;160046;160047;160048;160049;160050;160051;160052;160053;160054 160048 4768 12 IILEPMDLK Unmodified 1070.6046 0.60456821 3143 Q86U86 PBRM1 Protein polybromo-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 78.501 77.985 2 0.0041866 97215 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.5 51.839 204150000 0 110880000 2094400 4758700 5488600 6038100 5019200 0 4668000 9049200 9935600 9976200 6288400 10110000 19846000 23824 3143 21773 200359;200360;200361;200362;200363;200364;200365;200366;200367;200368;200369;200370;200371 160055;160056;160057;160058;160059 160056 5 IILLAEGR Unmodified 883.5491 0.54910224 1164 P23526 AHCY Adenosylhomocysteinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 60.592 60.753 2 0.019504 69401 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 63.565 14.207 138520000 0 0 0 7727700 0 3915600 4536800 9236800 0 7060600 19834000 17796000 5632200 13747000 49030000 23825 1164 21774 200372;200373;200374;200375;200376;200377;200378;200379;200380;200381 160060;160061;160062;160063 160063 4 IILPNVNSDSVHTK Unmodified 1535.8308 0.83075641 2561 Q15652 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 58.957 59.067 3 0.00053546 67199 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 63.185 46.655 80905000 0 0 0 4188500 5245300 0 6718100 6607300 7200800 9169700 9911800 10607000 0 8684500 12572000 23826 2561 21775 200382;200383;200384;200385;200386;200387;200388;200389;200390;200391 160064;160065;160066;160067;160068;160069;160070;160071;160072;160073 160064 8 IILPVQGPEPAAEMPDVK Oxidation (M) 1919.0074 0.0074001489 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 78.256 77.948 2 2.3352E-11 90119 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 89.301 69.094 104320000 0 34536000 0 4087200 4364000 6781100 5373000 3942800 6096700 5764900 7133900 7970600 5707800 6499100 6063600 23827 2193 21776 200392;200393;200394;200395;200396;200397;200398;200399;200400;200401;200402;200403;200404 160074;160075;160076;160077;160078;160079;160080;160081;160082;160083;160084;160085 160075 3559 12 IILPVQGPEPAAEMPDVK Unmodified 1903.0125 0.012485527 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.25 3.77 2 2 4 4 1 1 1 1 85.738 83.749 2;3 0.00049028 103878 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.007 65.121 302200000 0 280990000 0 0 2859800 0 0 0 0 0 5812700 7063700 0 5469400 0 23828 2193 21776 200405;200406;200407;200408;200409;200410;200411;200412 160086;160087;160088;160089;160090 160086 4 IILQPCGSK Unmodified 1014.5532 0.55320134 2541 Q15517 CDSN Corneodesmosin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 39.402 38.949 2 0.0030604 43352 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 91.853 50.351 204680000 8790800 0 0 33962000 10328000 13457000 11800000 10725000 8269200 23527000 16452000 29689000 22417000 15259000 0 23829 2541 21777 200413;200414;200415;200416;200417;200418;200419;200420;200421;200422;200423;200424 160091;160092;160093;160094;160095;160096;160097;160098;160099;160100;160101;160102;160103;160104;160105;160106 160094 16 IILQSEGLR Unmodified 1027.6026 0.60259438 422 O60671 RAD1 Cell cycle checkpoint protein RAD1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 52.241 52.762 2 0.0071283 59138 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.248 11.286 71763000 0 0 0 0 0 0 0 0 0 0 0 29686000 0 9228100 32849000 23830 422 21778 200425;200426;200427 160107;160108;160109 160109 2 IILSDEGK Unmodified 873.48075 0.48074791 1235 P28347;Q15561;Q99594;Q15562 TEAD1;TEAD4;TEAD3;TEAD2 Transcriptional enhancer factor TEF-1;Transcriptional enhancer factor TEF-3;Transcriptional enhancer factor TEF-5;Transcriptional enhancer factor TEF-4 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.257 30.446 2 0.0075833 33323 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 89.142 49.924 671920000 0 0 0 44873000 42611000 54608000 43682000 47349000 43606000 61868000 67417000 66859000 60868000 57541000 80641000 23831 1235 21779 200428;200429;200430;200431;200432;200433;200434;200435;200436;200437;200438;200439 160110;160111;160112;160113;160114;160115;160116;160117;160118;160119;160120;160121 160120 7 IILSGSPMQNNLR Unmodified 1441.7711 0.77113304 2097 Q03468 ERCC6 DNA excision repair protein ERCC-6 yes yes 0 0 0 By MS/MS 10 0 1 1 67.804 67.126 2 0.028965 77825 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 44.309 25.529 1548800 0 0 0 1548800 0 0 0 0 0 0 0 0 0 0 0 23832 2097 21780 200440 160122 160122 1 IILSNPPSQGDYHGCPFR Unmodified 2056.9789 0.97889399 1583 P49643 PRIM2 DNA primase large subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 65.424 65.608 3 0.0016098 74474 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 29.274 23.293 47698000 0 0 0 0 2902200 0 0 3222400 0 7912600 6924800 6217300 5140900 6933400 8444000 23833 1583 21781 200441;200442;200443;200444;200445;200446;200447;200448 160123;160124 160123 2 IILSPFATTTK Unmodified 1190.6911 0.69107503 4798 Q9P0V3 SH3BP4 SH3 domain-binding protein 4 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 16 1 1 1 2 1 1 2 1 1 2 3 79.496 79.581 2 0.0062945 88729 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 56.916 26.304 61499000 0 0 0 2461200 2055100 3424100 5662100 2473600 3418100 7450000 4082000 5413500 0 5804400 19255000 23834 4798 21782 200449;200450;200451;200452;200453;200454;200455;200456;200457;200458;200459;200460;200461;200462;200463;200464 160125;160126;160127;160128;160129 160128 5 IILVEDLPNQFYR Unmodified 1618.8719 0.87189295 564 O75943 RAD17 Cell cycle checkpoint protein RAD17 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 88.328 88.458 2 0.0056251 102631 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 61.65 49.073 4889100 0 0 0 0 0 0 0 0 0 1877100 0 0 0 0 3012100 23835 564 21783 200465;200466 160130 160130 1 IIMVLPEDPK Oxidation (M) 1169.6366 0.63659662 2724 Q5FWF5 ESCO1 N-acetyltransferase ESCO1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 4 1 2 1 64.372 64.678 2 0.0040531 74028 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 66.073 48.833 15229000 0 0 0 0 0 0 0 0 0 4114300 4297300 6817800 0 0 0 23836 2724 21784 200467;200468;200469;200470 160131;160132;160133;160134 160132 4369 4 IIMYDQNHLLGR Oxidation (M) 1487.7555 0.75548298 2945 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 57.334 57.676 3 0.00035445 65216 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 69.451 55.367 83277000 0 0 0 0 0 0 0 0 0 0 21062000 22350000 22079000 17785000 0 23837 2945 21785 200471;200472;200473;200474;200475;200476;200477;200478 160135;160136;160137;160138;160139;160140;160141;160142;160143 160138 4580 9 IIMYDQNHLLGR Unmodified 1471.7606 0.76056836 2945 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.545 66.63 3 0.004785 76107 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 36 31.882 127190000 0 0 0 4250800 2834500 11028000 3991500 5525300 7884400 8644900 8727500 16377000 12398000 15669000 29861000 23838 2945 21785 200479;200480;200481;200482;200483;200484;200485;200486;200487;200488;200489;200490 160144;160145;160146;160147;160148;160149;160150;160151;160152 160147 7 IINADSEDPK Unmodified 1100.535 0.53496832 1369 P35998 PSMC2 26S protease regulatory subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.94 3.58 1 3 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26.503 26.248 2 0.00046371 21381 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 135.79 77.624 2012400000 56056000 487010000 2821800 108270000 106950000 135930000 59560000 44048000 36431000 192910000 255580000 289200000 59697000 74058000 103860000 23839 1369 21786 200491;200492;200493;200494;200495;200496;200497;200498;200499;200500;200501;200502;200503;200504;200505;200506 160153;160154;160155;160156;160157;160158;160159;160160;160161;160162;160163;160164;160165;160166;160167;160168;160169 160154 17 IINAFFPEGEDQVNFR Unmodified 1894.9214 0.92136233 4042 Q99653 CHP1 Calcineurin B homologous protein 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 3 2 1 86.164 86.315 2 0.0010783 99822 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.471 45.282 7950900 0 0 0 0 0 0 0 0 0 0 0 2509600 0 0 5441300 23840 4042 21787 200507;200508;200509 160170;160171 160170 2 IINAVEK Unmodified 785.4647 0.46470391 1782 P56282 POLE2 DNA polymerase epsilon subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 20.848 21.036 2 0.04445 21665 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 66.799 22.078 48844000 0 0 0 5274600 3278400 4357500 0 0 2818900 7207300 5880500 7301700 6617500 6107500 0 23841 1782 21788 200510;200511;200512;200513;200514;200515;200516;200517;200518 160172 160172 1 IINDLLAR Unmodified 926.55492 0.5549159 1654 P51530 DNA2 DNA replication ATP-dependent helicase/nuclease DNA2;DNA replication nuclease DNA2;DNA replication ATP-dependent helicase DNA2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 60.85 61.006 2 0.025549 69540 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 58.604 17.302 3317900 0 0 0 0 0 0 0 0 1278800 2039100 0 0 0 0 0 23842 1654 21789 200519;200520 160173 160173 1 IINDLLQSLR Unmodified 1183.6925 0.69247202 3690 Q92945 KHSRP Far upstream element-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 83.181 83.313 2 0.0017911 96426 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 101.65 44.365 175250000 0 0 0 0 0 7895800 0 0 10562000 26496000 19123000 23749000 12693000 0 74728000 23843 3690 21790 200521;200522;200523;200524;200525;200526;200527;200528;200529;200530;200531 160174;160175;160176;160177;160178;160179;160180;160181;160182;160183;160184;160185 160176 12 IINDYEEFSK Unmodified 1256.5925 0.5924832 2447 Q14790 CASP8 Caspase-8;Caspase-8 subunit p18;Caspase-8 subunit p10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.87 3 5 1 1 1 1 1 1 1 1 55.023 52.717 2 0.0027746 59702 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 80.231 36.985 246160000 4222700 195870000 3905700 12262000 3523800 0 5452800 3863800 0 0 17058000 0 0 0 0 23844 2447 21791 200532;200533;200534;200535;200536;200537;200538;200539 160186;160187;160188;160189 160188 3 IINEPTAAAIAYGLDK Unmodified 1658.8879 0.88793694 934;932;1743 P11142;P11021;P54652 HSPA8;HSPA5;HSPA2 Heat shock cognate 71 kDa protein;78 kDa glucose-regulated protein;Heat shock-related 70 kDa protein 2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.45 3.68 11 2 27 3 6 4 2 2 2 2 2 2 2 2 3 2 4 2 81.771 81.031 2;3 1.0438E-42 93410 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 164.11 136.63 21731000000 22781000 2172800000 65194000 462660000 900740000 1342800000 941770000 1041400000 878880000 1729600000 2383900000 2484100000 950280000 1390800000 4962800000 23845 934;932;1743 21792 200540;200541;200542;200543;200544;200545;200546;200547;200548;200549;200550;200551;200552;200553;200554;200555;200556;200557;200558;200559;200560;200561;200562;200563;200564;200565;200566;200567;200568;200569;200570;200571;200572;200573;200574;200575;200576;200577;200578;200579 160190;160191;160192;160193;160194;160195;160196;160197;160198;160199;160200;160201;160202;160203;160204;160205;160206;160207;160208;160209;160210;160211;160212;160213;160214;160215;160216;160217;160218;160219;160220;160221;160222;160223;160224;160225 160200 30 IINEPTAAAIAYGLDKK Unmodified 1786.9829 0.98289996 934;1743 P11142;P54652 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.408 76.466 3 4.6428E-05 88055 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 71.697 60.435 178470000 0 0 0 4792700 7783900 4393700 8019000 6272700 4900300 13114000 19510000 35306000 9330700 11639000 53405000 23846 934;1743 21793 200580;200581;200582;200583;200584;200585;200586;200587;200588;200589;200590;200591 160226;160227;160228;160229;160230;160231;160232;160233;160234;160235;160236;160237 160228 12 IINEPTAAAIAYGLDKR Unmodified 1814.989 0.98904797 932 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 77.483 77.552 3 6.0433E-07 89569 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 80.638 68.353 77621000 0 0 0 0 4969100 0 0 11741000 4438200 13130000 0 31879000 11464000 0 0 23847 932 21794 200592;200593;200594;200595;200596;200597;200598;200599 160238;160239;160240;160241;160242;160243;160244;160245 160244 8 IINEPTAAAIAYGLDR Unmodified 1686.8941 0.89408495 908;1047 P0DMV9;P0DMV8;P17066 HSPA1B;HSPA1A;HSPA6 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 82.145 82.206 2;3 3.5502E-36 94711 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 156.69 130.65 4861400000 0 0 0 43093000 160750000 242400000 160390000 236030000 141800000 412770000 543880000 605440000 132170000 431030000 1751700000 23848 908;1047 21795 200600;200601;200602;200603;200604;200605;200606;200607;200608;200609;200610;200611;200612;200613;200614;200615;200616;200617;200618;200619;200620;200621;200622;200623 160246;160247;160248;160249;160250;160251;160252;160253;160254;160255;160256;160257;160258;160259;160260;160261;160262;160263;160264;160265;160266 160252 16 IINEPTAAAIAYGLDRTGK Unmodified 1973.0582 0.058190166 908 P0DMV9;P0DMV8 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 78.86 78.974 3 1.291E-05 90912 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.87 36.175 95147000 0 0 0 0 1923300 0 4280800 7730100 7348800 8788100 8960600 7369800 3201900 6577600 38966000 23849 908 21796 200624;200625;200626;200627;200628;200629;200630;200631;200632;200633 160267;160268;160269;160270;160271;160272;160273;160274 160269 8 IINEVKPTEIYNLGAQSHVK Unmodified 2252.2165 0.21648172 411 O60547 GMDS GDP-mannose 4,6 dehydratase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 2 1 2 2 1 1 2 70.482 70.051 3;4 1.6507E-08 91952 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.776 74.522 444670000 292840000 0 0 0 0 4770400 0 26022000 14461000 24339000 16712000 0 9668100 10162000 45689000 23850 411 21797 200634;200635;200636;200637;200638;200639;200640;200641;200642;200643;200644;200645;200646 160275;160276;160277;160278;160279;160280;160281;160282;160283;160284;160285;160286;160287;160288 160282 11 IINFAPSLLR Unmodified 1142.6812 0.68117905 282 O15397 IPO8 Importin-8 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 85.013 85.079 2 0.0094297 98225 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.598 42.636 56747000 0 0 0 2968900 2922300 7207500 4669300 3918600 3908500 4126100 6155700 5556600 4277700 3471900 7564200 23851 282 21798 200647;200648;200649;200650;200651;200652;200653;200654;200655;200656;200657;200658 160289;160290;160291;160292;160293;160294;160295;160296 160292 8 IINGIVQK Unmodified 883.5491 0.54910224 602 O94913 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37.316 36.622 2 0.016417 47389 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.191 62.349 97326000 12176000 16163000 0 3736400 4096100 4499200 5183300 5770500 4674000 5694100 5493300 7795300 7571100 5552800 8920200 23852 602 21799 200659;200660;200661;200662;200663;200664;200665;200666;200667;200668;200669;200670;200671;200672 160297;160298;160299;160300;160301;160302;160303 160299 7 IINILTDK Unmodified 928.55933 0.55933258 1638 P50851 LRBA Lipopolysaccharide-responsive and beige-like anchor protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.56 3.62 4 1 11 2 2 1 1 1 1 1 1 1 1 1 1 1 1 67.449 65.623 2 0.0096783 84576 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 132.57 52.338 287060000 43752000 112290000 6436800 6425500 5854200 12032000 8432900 0 8263000 11582000 13104000 19511000 10597000 11282000 17498000 23853 1638 21800 200673;200674;200675;200676;200677;200678;200679;200680;200681;200682;200683;200684;200685;200686;200687;200688 160304;160305;160306;160307;160308;160309;160310;160311 160306 7 IINLDNESQTTSSSNNEK Unmodified 1992.9236 0.92360676 3470 Q8TAF3 WDR48 WD repeat-containing protein 48 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 39.866 40.176 2 0.00018061 45036 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 74.326 68.72 33342000 0 0 0 0 0 6239300 0 0 3458600 4661400 5316600 0 4780400 2937800 5948100 23854 3470 21801 200689;200690;200691;200692;200693;200694;200695 160312;160313;160314 160312 3 IINNTENLVR Unmodified 1184.6513 0.65133548 5261 Q9Y617 PSAT1 Phosphoserine aminotransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 44.51 43.637 2 0.0011126 47667 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 109.71 91.275 167540000 0 30182000 0 3537400 1927100 0 0 0 0 0 30421000 0 0 14141000 87332000 23855 5261 21802 200696;200697;200698;200699;200700;200701;200702 160315;160316;160317;160318;160319;160320 160316 6 IINNTENLVRELLAVPDNYK Unmodified 2327.2485 0.24851013 5261 Q9Y617 PSAT1 Phosphoserine aminotransferase yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 98.546 94.535 3 2.9975E-05 117254 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 63.436 60.383 19175000 0 19175000 0 0 0 0 0 0 0 0 0 0 0 0 0 23856 5261 21803 200703;200704 160321;160322 160321 2 IINTPEVVR Unmodified 1039.6026 0.60259438 4403 Q9H4M9 EHD1 EH domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 48.409 48.468 2 0.011907 54740 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 62.107 7.496 22573000 0 0 0 0 0 11164000 11409000 0 0 0 0 0 0 0 0 23857 4403 21804 200705;200706 160323;160324 160323 2 IINYNVEQECNNFLR Unmodified 1924.9101 0.91014572 2183 Q12768 KIAA0196 WASH complex subunit strumpellin yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 76.642 76.706 2 3.1817E-20 88168 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 115.29 101.13 24859000 0 0 0 0 1773100 3803500 0 0 0 3432100 3833400 0 0 4662900 7354300 23858 2183 21805 200707;200708;200709;200710;200711;200712 160325;160326;160327;160328 160327 4 IINYRDDEK Unmodified 1164.5775 0.57750184 3702 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.39 3.7 5 1 12 1 3 2 1 1 1 1 1 1 1 1 1 1 1 1 21.095 19.957 2;3 0.0047923 27527 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 138.54 59.071 786120000 17296000 150850000 203500000 24343000 21825000 25177000 24593000 36244000 19292000 39472000 40177000 49568000 38269000 33891000 61617000 23859 3702 21806 200713;200714;200715;200716;200717;200718;200719;200720;200721;200722;200723;200724;200725;200726;200727;200728;200729;200730 160329;160330;160331;160332;160333;160334;160335;160336;160337;160338;160339;160340;160341;160342;160343 160335 6 IIPALQSR Unmodified 896.54435 0.54435122 1424 P40937 RFC5 Replication factor C subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.865 47.031 2 0.040979 52673 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 50.127 13.731 463580000 0 0 0 24088000 25559000 42606000 25778000 32825000 22412000 50567000 51370000 44932000 50652000 37814000 54975000 23860 1424 21807 200731;200732;200733;200734;200735;200736;200737;200738;200739;200740;200741;200742 160344 160344 1 IIPENDIK Unmodified 940.52295 0.52294707 2195 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36.014 35.335 2 0.029412 44786 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.774 13.627 157180000 1002000 64518000 0 4867200 4598800 7650500 5771300 5200200 5255700 11496000 8973600 12598000 7883800 7607800 9753300 23861 2195 21808 200743;200744;200745;200746;200747;200748;200749;200750;200751;200752;200753;200754;200755;200756 160345;160346;160347 160347 3 IIPFLPGK Unmodified 883.55312 0.55312499 10;2795 Q5TCZ1;A1X283 SH3PXD2A;SH3PXD2B SH3 and PX domain-containing protein 2A;SH3 and PX domain-containing protein 2B no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.069 79.174 2 0.031664 90960 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.787 28.96 132620000 0 0 0 0 8962800 12774000 11556000 10678000 8180900 11445000 13275000 16048000 10609000 10108000 18988000 23862 2795;10 21809 200757;200758;200759;200760;200761;200762;200763;200764;200765;200766;200767 160348;160349;160350;160351;160352;160353;160354;160355 160350 8 IIPGFMCQGGDFTR Oxidation (M) 1613.733 0.73303298 1931 P62937;P0DN26;A0A0B4J2A2;A0A075B767;A0A075B759;Q9Y536;F5H284 PPIA;PPIAL4C;PPIAL4E;PPIAL4A;PPIAL4D Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase A-like 4A/B/C;Peptidyl-prolyl cis-trans isomerase A-like 4D yes no 0 1 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 2 2 1 1 1 2 1 2 2 2 2 2 72.126 72.189 2 9.846E-12 82905 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 99.215 87.683 659940000 0 0 0 14870000 8509800 6061700 5367400 4950200 11687000 4140300 115390000 163160000 16506000 68118000 241180000 23863 1931 21810 200768;200769;200770;200771;200772;200773;200774;200775;200776;200777;200778;200779;200780;200781;200782;200783;200784;200785;200786;200787 160356;160357;160358;160359;160360;160361;160362;160363;160364;160365;160366;160367;160368;160369 160358 3110 13 IIPGFMCQGGDFTR Unmodified 1597.7381 0.73811836 1931 P62937;P0DN26;A0A0B4J2A2;A0A075B767;A0A075B759;Q9Y536;F5H284 PPIA;PPIAL4C;PPIAL4E;PPIAL4A;PPIAL4D Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase A-like 4A/B/C;Peptidyl-prolyl cis-trans isomerase A-like 4D yes no 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 79.633 79.74 2 5.71E-13 91274 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 109.6 103.07 413810000 0 0 0 0 1401800 0 0 5315600 3852900 3578000 42642000 75885000 6529500 29602000 245000000 23864 1931 21810 200788;200789;200790;200791;200792;200793;200794;200795;200796 160370;160371;160372;160373;160374;160375;160376 160374 7 IIPGGIADR Unmodified 910.52362 0.52361577 4651 Q9NUP9 LIN7C Protein lin-7 homolog C yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 42.97 43.238 2 0.019227 48709 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 54.157 7.7314 95887000 0 0 0 0 7081600 7332400 0 9236400 4153700 0 14578000 16337000 9420900 7610100 20137000 23865 4651 21811 200797;200798;200799;200800;200801;200802;200803;200804;200805 160377 160377 1 IIPLLTDPK Unmodified 1008.6219 0.62193284 834 P07099 EPHX1 Epoxide hydrolase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.909 75.972 2 0.0077875 86641 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 71.501 62.729 264130000 0 0 0 15335000 16654000 14814000 15874000 21972000 17626000 28788000 29951000 32187000 21166000 16887000 32874000 23866 834 21812 200806;200807;200808;200809;200810;200811;200812;200813;200814;200815;200816;200817 160378;160379;160380;160381;160382;160383;160384;160385;160386;160387;160388;160389;160390 160386 13 IIPLYSTLPPQQQQR Unmodified 1780.9836 0.98356866 295 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 77.19 77.248 2;3 0.032047 89302 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 56.404 40.86 59746000 0 0 0 4926100 0 5915500 0 0 5027500 10612000 9565800 0 0 8978700 14720000 23867 295 21813 200818;200819;200820;200821;200822;200823;200824 160391;160392 160391 1 IIPQGADSTMLATK Oxidation (M) 1460.7545 0.75447993 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 46.253 45.642 2 0.00027473 51622 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 71.085 42.686 282100000 0 48594000 0 12021000 14764000 18233000 20917000 19096000 15910000 16992000 18827000 31488000 23185000 20134000 21942000 23868 1364 21814 200825;200826;200827;200828;200829;200830;200831;200832;200833;200834;200835;200836;200837;200838 160393;160394;160395;160396;160397;160398;160399;160400;160401;160402;160403;160404 160393 2117 12 IIPQGADSTMLATK Unmodified 1444.7596 0.7595653 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 58.828 58.48 2 0.00034537 66140 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 90.913 72.241 365920000 0 135870000 0 11146000 12266000 13306000 17642000 23587000 13591000 17197000 20492000 25229000 18971000 24565000 32061000 23869 1364 21814 200839;200840;200841;200842;200843;200844;200845;200846;200847;200848;200849;200850;200851 160405;160406;160407;160408;160409;160410;160411;160412;160413;160414;160415;160416 160415 12 IIPSPDDSK Unmodified 970.49713 0.49712625 5102 Q9Y2H2 INPP5F Phosphatidylinositide phosphatase SAC2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 26.47 26.657 2 0.0083679 28568 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 69.825 26.055 104050000 0 0 0 5562200 8067600 9011900 9014700 7959000 6770500 12613000 13500000 15398000 0 6971100 9183100 23870 5102 21815 200852;200853;200854;200855;200856;200857;200858;200859;200860;200861;200862 160417;160418;160419;160420;160421;160422;160423;160424;160425 160421 9 IIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYK Unmodified 4054.0245 0.024513361 1868 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.22 0.416 7 2 1 6 2 97.412 93.11 3;4 9.2472E-73 113879 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 101.39 99.744 1488400000 108050000 1168100000 212270000 0 0 0 0 0 0 0 0 0 0 0 0 23871 1868 21816 200863;200864;200865;200866;200867;200868;200869;200870;200871 160426;160427;160428;160429;160430;160431;160432;160433;160434 160433 8 IIPVLLEHGLER Unmodified 1387.8187 0.81873516 1081 P18858 LIG1 DNA ligase 1 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 79.838 80.009 3 0.00051634 92126 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.924 47.384 10309000 0 0 0 0 0 0 0 0 0 0 0 0 0 1585500 8723200 23872 1081 21817 200872;200873 160435 160435 1 IIPVVVK Unmodified 766.53166 0.53166127 3907 Q96KG9 SCYL1 N-terminal kinase-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 54.794 54.973 2 0.044016 62061 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 66.994 66.994 231870000 0 0 0 0 0 39322000 27882000 29328000 23313000 42128000 39109000 0 0 30787000 0 23873 3907 21818 200874;200875;200876;200877;200878;200879;200880 160436 160436 1 IIPYFEALK Unmodified 1092.6219 0.62193284 4615 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 84.614 83.315 2 0.025402 104948 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.525 50.243 165480000 69884000 34832000 9088300 0 0 5424800 0 3157300 4159100 6822000 6840000 7594100 0 4604700 13076000 23874 4615 21819 200881;200882;200883;200884;200885;200886;200887;200888;200889;200890;200891 160437;160438;160439 160437 3 IIPYLDAYK Unmodified 1094.6012 0.60119739 2224 Q13017 ARHGAP5 Rho GTPase-activating protein 5 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 80.056 76.417 2 0.018209 95042 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.923 60.959 29512000 0 27345000 2166700 0 0 0 0 0 0 0 0 0 0 0 0 23875 2224 21820 200892;200893 160440;160441 160441 2 IIQAHGGTVDPTFTSR Unmodified 1698.8689 0.86893283 3021 Q6ZW49 PAXIP1 PAX-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 48.125 48.198 3 0.011277 54821 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 23.531 8.1445 38593000 0 0 0 4478700 2795300 0 4655400 0 0 0 7390500 8369500 10904000 0 0 23876 3021 21821 200894;200895;200896;200897;200898;200899 160442 160442 1 IIQEFLSK Unmodified 976.55933 0.55933258 1474 P43246 MSH2 DNA mismatch repair protein Msh2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 62.115 60.775 2 0.0067419 69562 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 98.299 31.617 1854900000 598530000 692150000 121340000 22899000 21340000 39381000 32732000 29783000 20788000 46702000 39629000 47806000 41173000 44146000 56506000 23877 1474 21822 200900;200901;200902;200903;200904;200905;200906;200907;200908;200909;200910;200911;200912;200913;200914;200915 160443;160444;160445;160446;160447;160448;160449;160450;160451;160452;160453;160454;160455;160456;160457;160458;160459;160460;160461;160462 160445 15 IIQEPPHK Unmodified 960.53927 0.53926584 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 16.397 15.618 2 0.0031941 22526 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 119.57 76.566 277830000 6981000 51814000 5630600 6543700 7180400 9920100 12478000 10769000 11823000 13610000 19587000 34334000 24515000 28918000 33723000 23878 213 21823 200916;200917;200918;200919;200920;200921;200922;200923;200924;200925;200926;200927;200928;200929;200930;200931 160463;160464;160465;160466;160467;160468;160469;160470;160471;160472;160473;160474;160475;160476;160477;160478;160479;160480;160481;160482;160483;160484 160474 18 IIQEPPHKK Unmodified 1088.6342 0.63422886 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 8.8224 8.9715 2 0.030597 7293 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 101.28 47.079 30387000 0 0 0 1376100 2223200 0 3252300 1616800 693630 1702200 7131100 5400800 2639500 2054000 2297300 23879 213 21824 200932;200933;200934;200935;200936;200937;200938;200939;200940;200941;200942 160485;160486 160486 2 IIQFNPGPEK Unmodified 1141.6132 0.61315906 1514 P46926 GNPDA1 Glucosamine-6-phosphate isomerase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 53.375 53.322 2 0.0020595 59690 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 86.67 57.294 515630000 0 0 0 136500000 55549000 0 41281000 54787000 0 0 105180000 0 0 122330000 0 23880 1514 21825 200943;200944;200945;200946;200947;200948 160487;160488;160489;160490;160491;160492 160488 6 IIQGQGVDEPLSETGFK Unmodified 1816.9207 0.92069363 4560 Q9NQ88 TIGAR Fructose-2,6-bisphosphatase TIGAR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 4 2 12 1 4 1 1 1 1 1 1 1 1 1 1 1 1 1 71.687 70.126 2;3 1.9874E-86 87616 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 194.06 165.1 2112400000 20798000 1933500000 5242200 5676000 5437700 21788000 9661100 6439000 5409300 12877000 18463000 12703000 8589800 13601000 32279000 23881 4560 21826 200949;200950;200951;200952;200953;200954;200955;200956;200957;200958;200959;200960;200961;200962;200963;200964;200965;200966 160493;160494;160495;160496;160497;160498;160499;160500;160501;160502;160503;160504;160505;160506;160507;160508;160509 160497 17 IIQINTDSLVQEK Unmodified 1499.8195 0.81952302 2735 Q5JSL3 DOCK11 Dedicator of cytokinesis protein 11 yes yes 0 0 0 By MS/MS 2 0 1 1 78.131 73.356 2 0.00024063 91549 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.813 66.392 23474000 0 23474000 0 0 0 0 0 0 0 0 0 0 0 0 0 23882 2735 21827 200967 160510 160510 1 IIQLIEGK Unmodified 912.56442 0.56441796 701 O95861 BPNT1 3'(2'),5'-bisphosphate nucleotidase 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 60.506 58.778 1;2 0.0024997 76895 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.74 36.27 1031400000 92961000 840090000 1804300 4149300 2466000 11990000 5610500 4281300 3300400 8846300 0 10227000 5680200 10300000 29654000 23883 701 21828 200968;200969;200970;200971;200972;200973;200974;200975;200976;200977;200978;200979;200980;200981;200982;200983;200984 160511;160512;160513;160514;160515;160516;160517;160518;160519;160520;160521;160522;160523;160524;160525;160526;160527;160528;160529 160515 18 IIQLLDDYPK Unmodified 1216.6703 0.67033959 808 P05388;Q8NHW5 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 6.07 3.94 6 1 7 2 3 2 1 1 1 1 1 1 1 79.752 78.358 2 9.2027E-06 99405 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 130.96 67.484 1582600000 53495000 1038000000 38800000 0 42256000 58505000 0 61496000 1625300 98965000 0 0 0 0 189460000 23884 808 21829 200985;200986;200987;200988;200989;200990;200991;200992;200993;200994;200995;200996;200997;200998 160530;160531;160532;160533;160534;160535;160536;160537;160538;160539 160535 7 IIQLLGTTPR Unmodified 1110.6761 0.67609367 2823 Q5VW36 FOCAD Focadhesin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.819 71.888 2 0.0018066 82770 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 101.54 59.89 92748000 0 0 0 7755900 10078000 10435000 8427200 8132200 4867700 11313000 6662400 8333200 5268700 5655500 5818400 23885 2823 21830 200999;201000;201001;201002;201003;201004;201005;201006;201007;201008;201009;201010 160540;160541;160542;160543;160544;160545;160546;160547;160548;160549;160550;160551;160552 160540 13 IIQQAGQVWFPDSAFK Unmodified 1833.9414 0.94136949 2231 Q13085 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 85.64 85.799 2 0.00026836 99176 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.288 70.412 11710000 0 0 0 0 0 0 0 0 0 5048800 2388800 0 0 0 4272200 23886 2231 21831 201011;201012;201013 160553;160554 160554 2 IIQQEQDQESADK Unmodified 1530.7162 0.71618016 530 O75665 OFD1 Oral-facial-digital syndrome 1 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching 10 0 13 2 1 1 1 1 1 1 1 1 1 1 1 14.895 15.066 2 4.5043E-51 14586 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 180.36 159.49 38238000 0 0 0 2519200 1979500 1581500 3899600 2501000 1785800 2992300 4432100 4475200 4031300 2814700 5225600 23887 530 21832 201014;201015;201016;201017;201018;201019;201020;201021;201022;201023;201024;201025;201026 160555;160556;160557;160558;160559;160560;160561;160562 160560 8 IIQQGLIR Unmodified 939.58655 0.58655038 3208 Q86YP4 GATAD2A Transcriptional repressor p66-alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.258 46.425 2 0.0067615 52051 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 98.133 9.5424 209470000 0 0 0 12642000 11731000 16648000 13598000 17906000 10555000 26202000 15100000 24250000 21430000 14516000 24892000 23888 3208 21833 201027;201028;201029;201030;201031;201032;201033;201034;201035;201036;201037;201038 160563;160564;160565;160566;160567;160568;160569;160570;160571;160572;160573;160574;160575 160572 13 IIQTAQTTPVQTVTIVQQAPLGQHQLPIK Unmodified 3150.7765 0.776483 2051 Q01167 FOXK2 Forkhead box protein K2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 83.814 83.96 4 6.79E-19 96975 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.912 57.914 19442000 0 0 0 0 0 0 0 0 0 7366700 0 0 0 0 12075000 23889 2051 21834 201039;201040 160576;160577 160577 2 IIQTDLTMLK Unmodified 1174.6631 0.66314572 4967 Q9UKI8 TLK1 Serine/threonine-protein kinase tousled-like 1 yes yes 0 0 0 By MS/MS 2 0 1 1 79.627 74.915 2 0.033216 93371 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 57.708 38.194 20760000 0 20760000 0 0 0 0 0 0 0 0 0 0 0 0 0 23890 4967 21835 201041 160578 160578 1 IIQTPGLWESENQNK Unmodified 1755.8792 0.87916317 4536 Q9NP72 RAB18 Ras-related protein Rab-18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.546 69.621 2 2.094E-27 79756 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 161.62 123.9 182630000 0 0 0 8282800 8344800 10705000 13343000 12965000 10056000 16845000 22314000 27288000 16558000 13281000 22652000 23891 4536 21836 201042;201043;201044;201045;201046;201047;201048;201049;201050;201051;201052;201053 160579;160580;160581;160582;160583;160584;160585;160586;160587;160588;160589;160590 160588 12 IIQVGNR Unmodified 798.47119 0.47118627 1977 P78347 GTF2I General transcription factor II-I yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.242 23.446 2 0.023657 25141 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 101.33 20.33 2238300000 0 0 0 149220000 154970000 166510000 136230000 103110000 94395000 204170000 211580000 281790000 243060000 216670000 276590000 23892 1977 21837 201054;201055;201056;201057;201058;201059;201060;201061;201062;201063;201064;201065 160591;160592;160593;160594 160591 4 IIQYGPGPDETLEQVQK Unmodified 1913.9735 0.97345748 2970 Q6T4R5 NHS Nance-Horan syndrome protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 69.828 69.5 2 6.1587E-13 86581 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.29 94.04 86229000 0 37894000 0 2210900 3275100 3925800 3429100 2537300 3822800 4978300 5268200 6489600 3625600 3773300 4998900 23893 2970 21838 201066;201067;201068;201069;201070;201071;201072;201073;201074;201075;201076;201077;201078 160595;160596;160597;160598;160599;160600 160596 5 IIRDHGDMTNRK Oxidation (M) 1470.7361 0.73614452 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 1 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 5.63 5.7597 3 0.0008041 2993 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.318 63.699 146650000 0 0 0 11799000 6431100 0 10092000 10047000 10615000 8992800 7666200 25673000 22438000 14697000 18199000 23894 2930 21839 201079;201080;201081;201082;201083;201084;201085;201086;201087;201088;201089 160601;160602;160603;160604;160605 160601 4556 5 IIRDHGDMTNRK Unmodified 1454.7412 0.7412299 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 7.7748 8.018 3 0.00021091 6430 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 94.122 59.437 80159000 0 0 0 0 0 0 0 0 0 0 0 22659000 21854000 15460000 20187000 23895 2930 21839 201090;201091;201092;201093 160606;160607;160608;160609 160608 3 IIREIFPDIK Unmodified 1242.7336 0.73360855 1536 P48382 RFX5 DNA-binding protein RFX5 yes yes 0 0 1 By MS/MS 10 0 1 1 73.899 74.238 3 0.027925 84915 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.58 17.241 11188000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11188000 23896 1536 21840 201094 160610 160610 1 IIRQEPSDSPMFIINR Unmodified 1914.9986 0.9985668 2075 Q02413 DSG1 Desmoglein-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 74.346 74.292 3 1.5929E-23 85522 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 119.45 103.33 217260000 0 0 0 26768000 9373200 19783000 0 102560000 14297000 20575000 0 0 23901000 0 0 23897 2075 21841 201095;201096;201097;201098;201099;201100;201101 160611;160612;160613;160614;160615;160616;160617;160618;160619;160620;160621;160622 160616 12 IIRQEPSDSPMFIINR Oxidation (M) 1930.9935 0.99348142 2075 Q02413 DSG1 Desmoglein-1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 63.516 63.381 3 7.1615E-28 72882 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 130.27 107.79 455990000 0 0 0 150270000 50442000 0 0 148530000 0 0 0 0 72245000 34496000 0 23898 2075 21841 201102;201103;201104;201105;201106 160623;160624;160625;160626;160627;160628;160629;160630;160631;160632 160628 3371 10 IIRSENFEELLK Unmodified 1489.814 0.81404372 1247 P29373 CRABP2 Cellular retinoic acid-binding protein 2 yes yes 0 0 1 By MS/MS 2 0 1 1 83.017 74.886 3 0.0018698 98044 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.224 49.125 11559000 11559000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23899 1247 21842 201107 160633 160633 1 IIRTDWDAGFK Unmodified 1320.6826 0.68263561 1684 P52298 NCBP2 Nuclear cap-binding protein subunit 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 62.97 63.285 3 0.04575 71500 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 24.853 1.1293 36916000 0 0 0 0 0 0 0 0 0 5370100 4890400 6862900 4189100 4099000 11505000 23900 1684 21843 201108;201109;201110;201111;201112;201113 160634 160634 1 IISAASEGGANVFTVSYFK Unmodified 1959.9942 0.99419293 1009 P14868 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS 3 0 1 1 89.095 85.542 2 0.0021848 87369 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 66.498 57.985 2904600 2904600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23901 1009 21844 201114 160635 160635 1 IISECSK Unmodified 835.41095 0.41095378 590 O94826 TOMM70A Mitochondrial import receptor subunit TOM70 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 11.029 7.7037 2 0.040529 10762 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.462 12.064 26021000 0 26021000 0 0 0 0 0 0 0 0 0 0 0 0 0 23902 590 21845 201115;201116 160636 160636 1 IISEEHWYLDLPELK Unmodified 1883.9669 0.96691554 4022 Q99547 MPHOSPH6 M-phase phosphoprotein 6 yes yes 0 0 0 By MS/MS 2 0 1 1 95.462 87.332 3 0.00082132 112938 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.037 54.095 5100900 5100900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23903 4022 21846 201117 160637 160637 1 IISENSMDSAISDATSELEGK Unmodified 2196.0104 0.010372854 4254 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 89.959 85.905 2 5.4539E-107 106739 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 237.59 227.81 37757000 0 37757000 0 0 0 0 0 0 0 0 0 0 0 0 0 23904 4254 21847 201118;201119 160638 160638 1 IISESAQMNEFETLTAK Oxidation (M) 1926.9245 0.92445838 3101 Q7Z4S6 KIF21A Kinesin-like protein KIF21A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.64 2.9 1 1 9 2 1 1 1 1 1 1 1 1 1 71.887 71.142 2 1.6093E-18 81685 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 100.22 94.729 107480000 0 42536000 0 3930800 5931800 9613800 5666200 0 5707100 7836800 7294400 11004000 0 0 7962700 23905 3101 21848 201120;201121;201122;201123;201124;201125;201126;201127;201128;201129;201130 160639;160640;160641;160642;160643;160644;160645;160646;160647;160648;160649 160647 4712 11 IISESAQMNEFETLTAK Unmodified 1910.9295 0.92954376 3101 Q7Z4S6 KIF21A Kinesin-like protein KIF21A yes yes 0 0 0 By MS/MS By MS/MS 2 0 4 2 2 82.322 79.088 2;3 1.4643E-05 98373 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.327 50.422 55827000 0 47885000 7941200 0 0 0 0 0 0 0 0 0 0 0 0 23906 3101 21848 201131;201132;201133;201134 160650;160651;160652;160653;160654 160651 5 IISIDTSSLR Unmodified 1103.6186 0.61863837 2578 Q15788 NCOA1 Nuclear receptor coactivator 1 yes yes 0 0 0 By MS/MS 10 0 1 1 66.392 66.574 2 0.030743 76355 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 57.859 30.897 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23907 2578 21849 201135 160655 160655 1 IISIFSGTEK Unmodified 1093.6019 0.60192568 2248 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.18 3.29 3 1 13 1 2 1 1 1 1 1 1 1 1 1 1 2 1 1 72.48 71.403 2 6.1996E-06 91209 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.36 91.34 1381000000 555880000 355480000 68399000 27044000 16936000 39170000 28749000 20320000 17677000 37384000 40920000 47881000 29407000 31634000 64132000 23908 2248 21850 201136;201137;201138;201139;201140;201141;201142;201143;201144;201145;201146;201147;201148;201149;201150;201151;201152 160656;160657;160658;160659;160660;160661;160662;160663;160664;160665;160666;160667;160668;160669;160670;160671;160672;160673;160674 160660 17 IISLDLPVAEVYK Unmodified 1458.8334 0.83338217 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 90.118 90.256 2 0.0015244 104792 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 66.595 39.481 30238000 0 0 0 0 0 2899800 989360 1332300 1971600 4086600 2413600 3674000 1085500 3086000 8699700 23909 2775 21851 201153;201154;201155;201156;201157;201158;201159;201160;201161;201162 160675;160676;160677;160678;160679;160680;160681;160682 160679 8 IISLDLPVAEVYKK Unmodified 1586.9283 0.92834519 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS 6.8 3.92 2 3 1 1 1 1 1 86.097 84.185 3 0.00054571 108118 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.895 60.981 43876000 19013000 0 0 0 0 0 0 0 0 4394900 4847600 0 0 0 15620000 23910 2775 21852 201163;201164;201165;201166;201167 160683;160684;160685 160685 3 IISLETYNLLR Unmodified 1333.7606 0.76055158 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 86.104 86.213 2 0.0009458 99965 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 90.657 67.228 26318000 0 0 0 0 1189000 2002500 1350500 1960900 1516200 4457600 2295100 4226000 0 1999200 5320900 23911 2501 21853 201168;201169;201170;201171;201172;201173;201174;201175;201176;201177 160686;160687;160688;160689 160686 4 IISLLSGK Unmodified 829.5273 0.52730417 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.286 63.381 2 0.018652 72544 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 64.265 1.5473 82969000 0 0 0 4715700 3843100 6367500 6744000 5940100 4963700 6186400 9266300 10569000 8208500 5824100 10341000 23912 2446 21854 201178;201179;201180;201181;201182;201183;201184;201185;201186;201187;201188;201189 160690;160691 160691 2 IISLSSSVPEAESQPIGK Unmodified 1840.9782 0.97820851 457 O75128 COBL Protein cordon-bleu yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 73.722 73.838 2 1.0031E-19 85145 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 124.86 108.97 142920000 0 0 0 0 12121000 11605000 12002000 11666000 12492000 13612000 15913000 14874000 10206000 9758800 18669000 23913 457 21855 201190;201191;201192;201193;201194;201195;201196;201197;201198;201199;201200 160692;160693;160694;160695;160696;160697;160698;160699;160700;160701 160701 6 IISNASCTTNCLAPLAK Unmodified 1832.9125 0.91245391 782 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.76 3.73 1 10 3 7 5 7 2 1 1 1 1 1 1 1 68.832 66.54 2;3 7.2044E-46 78059 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 170.04 162.47 14111000000 1323500000 12166000000 151540000 164710000 0 0 0 0 5157300 0 65270000 64834000 7757600 57967000 103730000 23914 782 21856 201201;201202;201203;201204;201205;201206;201207;201208;201209;201210;201211;201212;201213;201214;201215;201216;201217;201218;201219;201220;201221 160702;160703;160704;160705;160706;160707;160708;160709;160710;160711;160712;160713;160714;160715;160716;160717;160718;160719;160720;160721;160722;160723;160724 160712 19 IISNVPADSLIR Unmodified 1296.7402 0.74015049 4926 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B yes yes 0 0 0 By MS/MS By MS/MS By matching By matching 10 0 4 1 1 1 1 71.531 71.547 2 0.021707 82769 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 39.848 19.858 10861000 0 0 0 0 2612000 0 2802800 2847000 2599400 0 0 0 0 0 0 23915 4926 21857 201222;201223;201224;201225 160725 160725 1 IISPGSSTPSSTR Unmodified 1288.6623 0.6622941 2810 Q5VT52 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.395 28.505 2 8.4864E-06 30677 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 94.309 71.73 90855000 0 0 0 7278700 7545300 8585700 9649800 9121500 8425600 9713800 15668000 14866000 0 0 0 23916 2810 21858 201226;201227;201228;201229;201230;201231;201232;201233;201234;201235;201236;201237 160726;160727;160728;160729;160730;160731;160732;160733;160734;160735;160736;160737 160734 12 IISQVVDPK Unmodified 997.5808 0.5807963 3443;3879 Q8NFC6;Q96IK1 BOD1L1;BOD1 Biorientation of chromosomes in cell division protein 1-like 1;Biorientation of chromosomes in cell division protein 1 no no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.742 40.92 2 0.0095982 45889 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 66.27 28.74 417590000 0 0 0 24058000 24510000 28811000 32078000 27413000 23851000 35213000 41774000 53915000 46114000 32506000 47350000 23917 3443;3879 21859 201238;201239;201240;201241;201242;201243;201244;201245;201246;201247;201248;201249 160738;160739;160740;160741;160742;160743;160744;160745 160743 7 IISREVSDGIIAPGYEEEALTILSK Unmodified 2702.4378 0.43782704 1307 P31939 ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 95.93 92.424 3 5.2394E-25 114568 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.594 83.59 50775000 0 49937000 838130 0 0 0 0 0 0 0 0 0 0 0 0 23918 1307 21860 201250;201251;201252 160746;160747;160748;160749 160747 4 IISSIEQK Unmodified 916.52295 0.52294707 1882 P62258 YWHAE 14-3-3 protein epsilon yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 27.75 27.965 2 0.010759 29608 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 78.616 11.622 1149800000 0 0 0 45109000 35828000 0 47369000 51129000 28403000 84824000 160100000 195520000 52845000 108380000 340350000 23919 1882 21861 201253;201254;201255;201256;201257;201258;201259;201260;201261;201262;201263 160750;160751;160752;160753;160754 160751 4 IISSIEQKEENK Unmodified 1416.746 0.74602373 1882 P62258 YWHAE 14-3-3 protein epsilon yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 25.075 25.636 3 5.1735E-05 26093 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.189 71.715 54202000 0 0 0 0 0 0 0 0 0 0 0 24742000 0 13128000 16331000 23920 1882 21862 201264;201265;201266 160755;160756;160757;160758 160756 3 IISSNIVSGTTTK Unmodified 1319.7296 0.72964538 3105 Q7Z589 EMSY Protein EMSY yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 46.564 46.751 2 0.0068077 52937 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 46.706 20.969 32220000 0 0 0 0 2548500 3205100 2824100 3439400 0 3961300 4553100 0 4629400 3200400 3858400 23921 3105 21863 201267;201268;201269;201270;201271;201272;201273;201274;201275;201276;201277 160759;160760;160761;160762;160763;160764;160765 160759 7 IISSNQELIYEGR Unmodified 1520.7835 0.78347187 4897 Q9UHD2 TBK1 Serine/threonine-protein kinase TBK1 yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 58.945 59.239 2 0.0077707 67404 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 56.359 37.579 8395500 0 0 0 0 0 0 2519700 2717800 0 0 0 0 0 0 3158000 23922 4897 21864 201278;201279;201280 160766 160766 1 IISTEPLPGRK Unmodified 1209.7081 0.70812208 2684 Q4G0J3 LARP7 La-related protein 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 4 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38.819 37.545 2;3 0.0001976 51997 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.813 66.941 888210000 434060000 39435000 20051000 20240000 24212000 29530000 22569000 21594000 18686000 39024000 35512000 54034000 40180000 30486000 58600000 23923 2684 21865 201281;201282;201283;201284;201285;201286;201287;201288;201289;201290;201291;201292;201293;201294;201295;201296 160767;160768;160769;160770;160771;160772;160773;160774;160775 160769 4 IISTTTLNK Unmodified 989.57571 0.57571092 77 CON__P19013;P19013 KRT4 Keratin, type II cytoskeletal 4 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 33.766 33.96 2 0.0050719 37862 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 84.498 33.532 + 740920000 0 0 0 17199000 0 0 173230000 423990000 0 0 0 18022000 103530000 4947800 0 23924 77 21866 201297;201298;201299;201300;201301;201302 160776;160777;160778;160779 160779 4 IISVTPVK Unmodified 855.54295 0.54295423 2647 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 45.399 45.621 2 0.044838 49536 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.756 8.0698 154770000 0 0 0 11484000 0 16793000 15340000 14728000 12938000 17093000 17156000 14336000 0 11446000 23458000 23925 2647 21867 201303;201304;201305;201306;201307;201308;201309;201310;201311;201312 160780 160780 1 IITDVIGNPEEERR Unmodified 1639.8529 0.85294842 3688 Q92925 SMARCD2 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 57.588 57.475 3 2.7337E-12 66393 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 95.264 61.086 65453000 0 0 0 18271000 0 0 0 24120000 23062000 0 0 0 0 0 0 23926 3688 21868 201313;201314;201315;201316 160781;160782;160783;160784 160784 4 IITEGASILR Unmodified 1071.6288 0.62880913 2151 Q08209 PPP3CA Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 60.71 60.778 2 0.042395 69475 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 39.305 10.156 41667000 0 0 0 2393900 1898800 3400600 3665900 4020800 1645100 3619400 4032300 0 3833400 5232500 7924300 23927 2151 21869 201317;201318;201319;201320;201321;201322;201323;201324;201325;201326;201327 160785 160785 1 IITEGASILRQEK Unmodified 1456.8249 0.82494275 2151 Q08209 PPP3CA Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.797 52.94 3 0.00042145 58922 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 58.098 36.853 102160000 0 0 0 5027700 2372300 7611900 7891200 5317800 6205500 7990500 12157000 9771700 5451000 7896300 24466000 23928 2151 21870 201328;201329;201330;201331;201332;201333;201334;201335;201336;201337;201338;201339 160786;160787;160788;160789;160790;160791;160792;160793;160794;160795;160796 160793 11 IITEGFEAAK Unmodified 1077.5706 0.57062555 1410 P40227 CCT6A T-complex protein 1 subunit zeta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.11 3.8 6 1 12 1 5 1 1 1 1 1 1 1 1 1 1 1 1 1 50.444 48.738 2 0.00082118 54210 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 119.21 30.069 6837000000 89572000 2363400000 65715000 174130000 161340000 390470000 244370000 226600000 196520000 438440000 476840000 556150000 350180000 322140000 781130000 23929 1410 21871 201340;201341;201342;201343;201344;201345;201346;201347;201348;201349;201350;201351;201352;201353;201354;201355;201356;201357;201358 160797;160798;160799;160800;160801;160802;160803;160804;160805;160806;160807;160808;160809;160810;160811;160812;160813;160814;160815;160816;160817;160818 160812 21 IITGGAAAQDGR Unmodified 1128.5887 0.58873523 2213 Q12959 DLG1 Disks large homolog 1 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 17.225 17.357 2 0.004428 15906 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 57.59 13.82 4010700 0 0 0 0 0 1333300 0 0 1306900 0 0 0 0 1370500 0 23930 2213 21872 201359;201360;201361 160819;160820 160820 2 IITGGAPELAVEGNGPVESNAVLTK Unmodified 2435.2908 0.29076888 2222 Q12996 CSTF3 Cleavage stimulation factor subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.087 80.145 3 3.7118E-41 92617 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 80.061 72.068 97812000 0 0 0 1427300 4788600 8148100 6087800 6081700 5652200 11506000 8751100 9977800 6278500 7069900 22043000 23931 2222 21873 201362;201363;201364;201365;201366;201367;201368;201369;201370;201371;201372;201373 160821;160822;160823;160824;160825;160826;160827;160828;160829;160830;160831;160832;160833 160821 13 IITGPAPVLPPAALR Unmodified 1484.9079 0.90788452 3949 Q96PU8 QKI Protein quaking yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 83.137 83.2 2 0.00029872 96406 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 67.113 61.141 195520000 0 0 0 7162500 11103000 13059000 14632000 13498000 12650000 20396000 20043000 23106000 17795000 13392000 28687000 23932 3949 21874 201374;201375;201376;201377;201378;201379;201380;201381;201382;201383;201384;201385 160834;160835;160836;160837;160838;160839;160840;160841;160842;160843;160844;160845;160846;160847 160844 14 IITHPNFNGNTLDNDIMLIK Oxidation (M) 2298.1678 0.16781697 54 CON__P00761 yes yes 0 1 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 82.21 82.108 3 7.9144E-19 94910 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 79.511 59.643 + 44397000 0 0 0 5808500 0 0 0 0 0 0 0 0 0 0 38589000 23933 54 21875 201386;201387;201388 160848;160849 160848 52 2 IITIEETHEELK Unmodified 1453.7664 0.76642482 3621 Q92547 TOPBP1 DNA topoisomerase 2-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 53.107 52.945 3 0.0011759 58312 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.46 35.773 112720000 0 0 10501000 4575600 4574100 14928000 6351400 5426000 7030500 11365000 8037300 11154000 9369700 7336100 12077000 23934 3621 21876 201389;201390;201391;201392;201393;201394;201395;201396;201397;201398;201399;201400;201401 160850;160851;160852;160853;160854;160855;160856;160857;160858;160859;160860;160861 160854 11 IITIPAALQQVK Unmodified 1293.802 0.80202247 2142 Q07864 POLE DNA polymerase epsilon catalytic subunit A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 83.704 82.661 2 0.0017371 103842 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.136 53.815 57589000 6382500 17326000 0 1260100 2030000 3970300 1984900 2919400 2386700 0 0 4349100 3908500 3513100 7558000 23935 2142 21877 201402;201403;201404;201405;201406;201407;201408;201409;201410;201411;201412;201413 160862;160863;160864;160865;160866;160867;160868 160864 7 IITIPATQLAQCQLQTK Unmodified 1926.0608 0.060832703 2567 Q15723 ELF2 ETS-related transcription factor Elf-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.332 81.392 2 2.9805E-37 94441 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 155.02 139.81 152720000 0 0 0 3105300 10714000 11351000 8389600 12583000 7043600 13875000 14727000 20164000 13974000 13983000 22813000 23936 2567 21878 201414;201415;201416;201417;201418;201419;201420;201421;201422;201423;201424;201425 160869;160870;160871;160872;160873;160874;160875;160876;160877;160878;160879;160880;160881;160882;160883 160879 15 IITITGTQDQIQNAQYLLQNSVK Unmodified 2588.381 0.38098087 1868 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 90.487 90.521 3 3.451E-05 104895 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.011 38.023 20190000 0 0 0 1424400 0 0 0 0 0 5426100 2232800 0 0 0 11106000 23937 1868 21879 201426;201427;201428;201429 160884;160885;160886 160885 3 IITLAGPTNAIFK Unmodified 1357.7969 0.79693709 2521 Q15366 PCBP2 Poly(rC)-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 2 1 1 1 84.36 84.43 2 7.5427E-13 98130 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 133.81 104.33 8158400000 0 0 0 222660000 343580000 795050000 545690000 696200000 500220000 1017000000 711610000 770000000 493390000 627360000 1435700000 23938 2521 21880 201430;201431;201432;201433;201434;201435;201436;201437;201438;201439;201440;201441;201442 160887;160888;160889;160890;160891;160892;160893;160894;160895;160896;160897;160898;160899;160900;160901;160902;160903;160904 160902 17 IITLDTATEIEGLSTGCK Unmodified 1920.9714 0.97140857 3131 Q86T24 ZBTB33 Transcriptional regulator Kaiso yes yes 0 0 0 By MS/MS By MS/MS 2.4 0.49 3 2 4 1 88.037 83.738 2;3 4.811E-53 104056 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 186.16 138.16 105790000 0 105790000 0 0 0 0 0 0 0 0 0 0 0 0 0 23939 3131 21881 201443;201444;201445;201446;201447 160905;160906;160907;160908 160905 4 IITLEEGDIILTGTPK Unmodified 1711.9608 0.96076753 2936 Q6P587 FAHD1 Acylpyruvase FAHD1, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 92.435 84.305 2 0.0015593 109355 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.944 51.368 3538200 3538200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23940 2936 21882 201448 160909 160909 1 IITLTGPTNAIFK Unmodified 1387.8075 0.80750177 2520 Q15365 PCBP1 Poly(rC)-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 1 2 2 2 1 2 1 1 2 2 2 84.14 84.228 2;3 9.3014E-20 97479 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 155.06 75.584 6590300000 0 0 0 163660000 242260000 708070000 445220000 518930000 338980000 864360000 508160000 684170000 419640000 427050000 1269800000 23941 2520 21883 201449;201450;201451;201452;201453;201454;201455;201456;201457;201458;201459;201460;201461;201462;201463;201464;201465;201466;201467 160910;160911;160912;160913;160914;160915;160916;160917;160918;160919;160920;160921;160922;160923;160924;160925;160926 160923 16 IITPLDEHLR Unmodified 1205.6768 0.67682195 2730 Q5HYK7 SH3D19 SH3 domain-containing protein 19 yes yes 0 0 0 By MS/MS 10 0 1 1 60.519 61.019 3 0.025531 69453 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 61.353 41.567 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23942 2730 21884 201468 160927 160927 1 IITPLNK Unmodified 797.50109 0.50108942 533 O75694 NUP155 Nuclear pore complex protein Nup155 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.76 3.47 3 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 42.638 41.165 2 0.0088516 56233 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 146.21 70.902 1503700000 276230000 421110000 45522000 44399000 38663000 67773000 56313000 49462000 42889000 74535000 56262000 87869000 70056000 76662000 95965000 23943 533 21885 201469;201470;201471;201472;201473;201474;201475;201476;201477;201478;201479;201480;201481;201482;201483;201484;201485 160928;160929;160930;160931;160932;160933;160934;160935;160936;160937;160938;160939;160940;160941;160942;160943;160944;160945;160946;160947;160948 160942 16 IITQGEK Unmodified 787.44397 0.44396847 990 P13861 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 8.4142 8.5862 2 0.032282 6311 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 73.039 23.449 28169000 0 0 0 2523500 0 0 3105200 2980300 0 2534100 4759400 3069900 2911100 2345100 3940800 23944 990 21886 201486;201487;201488;201489;201490;201491;201492;201493;201494 160949 160949 1 IITQQVQPSK Unmodified 1140.6503 0.65027285 3105 Q7Z589 EMSY Protein EMSY yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 27.344 27.189 2 1.0635E-05 33628 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 137.13 106.44 77643000 0 22609000 0 3251700 2741900 4823800 3887700 3607500 3420000 6406400 5566900 6262500 5886500 4372700 4807000 23945 3105 21887 201495;201496;201497;201498;201499;201500;201501;201502;201503;201504;201505;201506;201507 160950;160951;160952;160953;160954;160955;160956 160952 6 IITQVFEMDISK Oxidation (M) 1438.7378 0.73776723 398 O60343 TBC1D4 TBC1 domain family member 4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 77.126 76.906 2 0.00050334 88881 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 74.841 43.767 43521000 0 0 9119100 0 2835900 6032600 4850000 0 3537300 4722800 3663200 4582800 4177100 0 0 23946 398 21888 201508;201509;201510;201511;201512;201513;201514;201515;201516 160957;160958;160959;160960;160961;160962;160963;160964;160965 160965 503 9 IITQVFEMDISK Unmodified 1422.7429 0.74285261 398 O60343 TBC1D4 TBC1 domain family member 4 yes yes 0 0 0 By MS/MS 2 0 1 1 89.067 80.937 2 0.0065329 105337 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.865 66.25 5007700 5007700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23947 398 21888 201517 160966 160966 1 IITTTNLHPVK Unmodified 1235.7238 0.72377215 3221 Q8IV38 ANKMY2 Ankyrin repeat and MYND domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.11 3.8 6 1 12 2 3 2 1 1 1 1 1 1 1 1 1 1 1 1 44.002 42.026 2;3 0.0030949 47022 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 48.284 33.604 787530000 478270000 134240000 75352000 9138000 4004300 10241000 6098000 6176500 4599900 11249000 9149400 11068000 7758900 6987700 13198000 23948 3221 21889 201518;201519;201520;201521;201522;201523;201524;201525;201526;201527;201528;201529;201530;201531;201532;201533;201534;201535;201536 160967;160968;160969;160970;160971;160972;160973;160974;160975;160976;160977;160978;160979;160980;160981 160980 11 IITVSMEDVK Unmodified 1133.6002 0.60021112 2168 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.742 63.83 2 0.0008873 72863 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 117.89 87.814 339750000 0 0 0 20133000 20373000 34382000 0 18963000 13836000 41103000 32991000 38289000 23050000 28654000 67980000 23949 2168 21890 201537;201538;201539;201540;201541;201542;201543;201544;201545;201546;201547;201548 160982;160983;160984;160985;160986;160987;160988;160989;160990;160991;160992;160993 160983 12 IITVSMEDVK Oxidation (M) 1149.5951 0.59512574 2168 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.744 42.92 2 0.0010803 47311 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 104.2 65.409 411050000 0 0 0 39088000 20826000 32878000 27886000 21409000 21941000 34525000 48642000 52977000 44217000 22737000 43920000 23950 2168 21890 201549;201550;201551;201552;201553;201554;201555;201556;201557;201558;201559;201560 160994;160995;160996;160997;160998;160999;161000;161001;161002;161003;161004 161002 3482 3 IITWTTEPK Unmodified 1087.5914 0.59136099 3094 Q7Z460 CLASP1 CLIP-associating protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 55.82 56.095 2 0.0085067 63183 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 69.423 34.616 23989000 0 0 0 0 0 7330900 0 1030100 0 0 0 15628000 0 0 0 23951 3094 21891 201561;201562;201563 161005;161006 161006 2 IITYDLIK Unmodified 977.57973 0.57973367 233 O14975 SLC27A2 Very long-chain acyl-CoA synthetase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73.085 72.608 2 0.0068947 83343 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 91.9 29.186 144650000 0 21682000 3327200 6565700 7271600 9337600 9980800 13110000 6390700 12588000 9351600 14242000 10605000 8619300 11585000 23952 233 21892 201564;201565;201566;201567;201568;201569;201570;201571;201572;201573;201574;201575;201576;201577 161007;161008;161009;161010;161011;161012;161013;161014;161015;161016;161017;161018 161013 12 IIVDDDDSK Unmodified 1018.4819 0.48187012 4765 Q9NZD8 SPG21 Maspardin yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 23.192 22.554 2 0.0054364 24188 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 77.732 57.212 43779000 13837000 0 0 4252500 2490600 6019700 3706400 3392100 3433600 6646700 0 0 0 0 0 23953 4765 21893 201578;201579;201580;201581;201582;201583;201584;201585;201586 161019;161020;161021;161022 161019 4 IIVDELK Unmodified 828.49567 0.49566969 1950 P63244 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 57.185 51.204 2 0.027725 66574 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.071 32.295 2796900000 193470000 2443400000 160020000 0 0 0 0 0 0 0 0 0 0 0 0 23954 1950 21894 201587;201588;201589 161023 161023 1 IIVDTYGGWGAHGGGAFSGK Unmodified 1948.9432 0.94316041 1297 P31153;Q00266 MAT2A;MAT1A S-adenosylmethionine synthase isoform type-2;S-adenosylmethionine synthase isoform type-1 yes no 0 0 0 By MS/MS 2.5 0.5 1 1 2 78.797 72.809 3 0.0015681 94171 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.047 28.024 27624000 27624000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23955 1297 21895 201590;201591 161024;161025 161025 2 IIVEGGGAVAALQAMK Oxidation (M) 1542.844 0.84396364 2904 Q6NXE6 ARMC6 Armadillo repeat-containing protein 6 yes yes 0 1 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 70.63 70.804 2 6.7384E-21 81422 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 114.83 87.719 27150000 0 0 0 0 0 4808100 2877400 2120100 1467600 5723900 3276600 0 3009500 0 3867200 23956 2904 21896 201592;201593;201594;201595;201596;201597;201598;201599 161026;161027;161028;161029;161030;161031;161032 161028 4538 7 IIVFSACR Unmodified 964.51642 0.51642191 2146 Q07960 ARHGAP1 Rho GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 58.209 58.233 2 0.009506 65954 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 82.671 54.159 86727000 0 0 0 6921400 6135800 10277000 9370400 5696800 7885200 14105000 8976700 0 5844400 11514000 0 23957 2146 21897 201600;201601;201602;201603;201604;201605;201606;201607;201608;201609 161033;161034;161035;161036;161037;161038 161034 6 IIVGDATEK Unmodified 944.51786 0.51786169 3874 Q96I25 RBM17 Splicing factor 45 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 28.299 27.494 2 0.0036563 29866 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 89.355 32.074 515140000 9201800 255170000 0 25162000 0 30559000 25186000 25738000 20471000 27048000 33608000 0 33592000 29402000 0 23958 3874 21898 201610;201611;201612;201613;201614;201615;201616;201617;201618;201619;201620 161039;161040;161041;161042;161043;161044;161045;161046;161047;161048;161049 161046 9 IIVLGLLPR Unmodified 992.67464 0.67463711 1965 P68402 PAFAH1B2 Platelet-activating factor acetylhydrolase IB subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 89.003 89.121 2 0.0086828 103067 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.915 60.975 17010000 0 0 0 0 0 2952500 0 0 0 1271000 1668900 1798800 646310 873840 7798100 23959 1965 21899 201621;201622;201623;201624;201625;201626;201627 161050;161051;161052;161053 161052 4 IIVPHNVSK Unmodified 1005.5971 0.59711507 3835 Q96F86 EDC3 Enhancer of mRNA-decapping protein 3 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 30.696 30.989 2 0.040615 33375 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 44.349 7.954 22339000 0 0 0 0 2116400 3827400 0 0 0 0 4354000 4678300 0 0 7363000 23960 3835 21900 201628;201629;201630;201631;201632 161054 161054 1 IIVSDHVEFPVR Unmodified 1409.7667 0.76669959 282 O15397 IPO8 Importin-8 yes yes 0 0 0 By MS/MS 10 0 1 1 72.507 72.487 3 0.0086089 83191 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 43.991 36.381 3711200000 0 0 0 0 0 3711200000 0 0 0 0 0 0 0 0 0 23961 282 21901 201633 161055 161055 1 IIVSFTPK Unmodified 903.54295 0.54295423 5199 Q9Y4F3 KIAA0430 Meiosis arrest female protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 63.491 63.716 2 0.013906 71956 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.342 21.984 24003000 0 0 0 0 0 3571600 0 0 2717500 3914600 4584200 0 4552800 0 4662000 23962 5199 21902 201634;201635;201636;201637;201638;201639 161056;161057;161058;161059;161060 161058 5 IIVVPLK Unmodified 780.54731 0.54731133 4350 Q9H1H9 KIF13A Kinesin-like protein KIF13A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.262 67.347 2 0.044016 77266 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.994 22.383 109100000 0 0 0 5551800 6276400 10508000 7903700 5183300 4298500 10859000 10887000 11753000 8748800 10981000 16153000 23963 4350 21903 201640;201641;201642;201643;201644;201645;201646;201647;201648;201649;201650;201651 161061;161062;161063;161064;161065;161066;161067;161068;161069 161061 9 IIYEQEGVYIHSSCGK Unmodified 1881.8931 0.89309867 3485 Q8TC07 TBC1D15 TBC1 domain family member 15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 6.8 3.92 2 3 1 1 1 1 1 55.235 54.61 3 0.025711 61458 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 19.071 8.5864 15727000 0 164100 3636300 0 0 6098900 0 0 2809600 0 3017800 0 0 0 0 23964 3485 21904 201652;201653;201654;201655;201656 161070;161071;161072 161071 3 IIYGGSVTGATCK Unmodified 1325.6649 0.66493664 1808 P60174 TPI1 Triosephosphate isomerase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 44.357 42.895 2 2.9164E-06 54736 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.82 89.162 3150000000 128790000 645910000 6415500 134650000 16024000 10076000 11068000 0 12902000 16524000 437540000 345350000 0 260130000 1124600000 23965 1808 21905 201657;201658;201659;201660;201661;201662;201663;201664;201665;201666;201667;201668;201669;201670;201671;201672 161073;161074;161075;161076;161077;161078;161079;161080;161081;161082;161083;161084;161085;161086;161087 161075 14 IIYHLDGQETPYLVK Unmodified 1787.9458 0.94578617 3700 Q92997 DVL3 Segment polarity protein dishevelled homolog DVL-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 78.822 73.637 3 3.3515E-23 94493 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 100.11 88.676 84058000 34637000 34461000 14960000 0 0 0 0 0 0 0 0 0 0 0 0 23966 3700 21906 201673;201674;201675 161088;161089;161090;161091 161089 4 IIYIAPMR Oxidation (M) 991.55247 0.55247306 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.837 52.98 2 0.013532 59066 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 62.714 31.425 367350000 0 0 0 8571900 7650200 34663000 13501000 10912000 17816000 33718000 48016000 59799000 60900000 28487000 43321000 23967 528 21907 201676;201677;201678;201679;201680;201681;201682;201683;201684;201685;201686;201687 161092;161093;161094;161095;161096;161097;161098;161099 161095 684 8 IIYIAPMR Unmodified 975.55756 0.55755844 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.628 68.707 2 0.024817 78465 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 59.205 31.68 78330000 0 0 0 3729100 4541600 5838000 4759600 5759400 4512600 9613400 8750300 9541300 4988200 7040000 9256200 23968 528 21907 201688;201689;201690;201691;201692;201693;201694;201695;201696;201697;201698;201699 161100;161101 161101 2 IIYIVHDEVK Unmodified 1227.6863 0.68632401 1195 P25788 PSMA3 Proteasome subunit alpha type-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.55 3.84 1 4 4 11 5 2 2 1 1 1 1 2 2 1 2 55.816 53.638 2;3 0.001838 68270 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 83.869 58.395 1967500000 393090000 38497000 1122700000 28705000 6110500 0 6621800 14036000 0 0 39002000 76589000 0 33565000 208550000 23969 1195 21908 201700;201701;201702;201703;201704;201705;201706;201707;201708;201709;201710;201711;201712;201713;201714;201715;201716;201717;201718;201719 161102;161103;161104;161105;161106;161107;161108;161109;161110;161111;161112;161113;161114;161115;161116;161117;161118;161119;161120;161121;161122;161123 161113 18 IKDDGPSQSESATETAMTLPSESR Oxidation (M) 2552.1548 0.15480526 4468 Q9H9A6 LRRC40 Leucine-rich repeat-containing protein 40 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 42.741 42.982 3 4.1865E-77 47596 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 133.1 125.57 203120000 0 0 0 0 17925000 14846000 23417000 16337000 13162000 19211000 20693000 33743000 13923000 9492100 20368000 23970 4468 21909 201720;201721;201722;201723;201724;201725;201726;201727;201728;201729;201730 161124;161125;161126;161127;161128;161129;161130;161131;161132;161133;161134;161135;161136;161137 161135 5903 14 IKDDGPSQSESATETAMTLPSESR Unmodified 2536.1599 0.15989064 4468 Q9H9A6 LRRC40 Leucine-rich repeat-containing protein 40 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.472 55.598 3 3.4537E-28 62333 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 97.509 93.557 221360000 0 0 0 9341200 16238000 11817000 19377000 18811000 7163100 24399000 22669000 27310000 13819000 16872000 33542000 23971 4468 21909 201731;201732;201733;201734;201735;201736;201737;201738;201739;201740;201741;201742 161138;161139;161140;161141;161142;161143;161144;161145;161146;161147;161148;161149 161141 12 IKDEPDNAQEYSHGQQQK Unmodified 2113.9665 0.96647463 2834 Q5VZL5 ZMYM4 Zinc finger MYM-type protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 16.241 16.656 3 0.0015584 16507 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 43.208 33.647 21423000 0 0 0 0 0 0 0 0 0 0 2389100 5635900 5724200 2909800 4764000 23972 2834 21910 201743;201744;201745;201746;201747 161150;161151 161151 2 IKDPDASKPEDWDER Unmodified 1799.8326 0.83260691 1225 P27797 CALR Calreticulin yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.64 1.67 1 21 1 2 2 1 2 2 2 2 2 2 1 2 1 35.378 35.535 3;4 1.0446E-09 39369 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 92.977 86.539 1612100000 0 0 0 73766000 51610000 31450000 78588000 98160000 92151000 114320000 225630000 282300000 122150000 208230000 233740000 23973 1225 21911 201748;201749;201750;201751;201752;201753;201754;201755;201756;201757;201758;201759;201760;201761;201762;201763;201764;201765;201766;201767;201768;201769 161152;161153;161154;161155;161156;161157;161158;161159;161160;161161;161162;161163;161164 161163 11 IKEEEAAK Unmodified 916.48656 0.48656157 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 6.0691 2.7683 2 0.041869 4249 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 111.95 20.094 45470000 0 45470000 0 0 0 0 0 0 0 0 0 0 0 0 0 23974 1201 21912 201770;201771 161165 161165 0 IKEEPLDDEYDK Unmodified 1492.6933 0.69331946 2834 Q5VZL5 ZMYM4 Zinc finger MYM-type protein 4 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 35.673 35.848 3 0.042748 39575 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 21.942 13.122 47112000 0 0 0 3188900 4942300 3845900 5036200 5833300 0 3180600 5577700 7194000 2594200 0 5719000 23975 2834 21913 201772;201773;201774;201775;201776;201777;201778;201779;201780;201781 161166 161166 1 IKFEMEQNLR Oxidation (M) 1322.6653 0.66527099 1354 P35527;CON__P35527 KRT9 Keratin, type I cytoskeletal 9 yes no 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 47 3 3 4 4 6 4 3 4 4 4 4 4 39.173 39.382 2;3 0.00019112 43747 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 132.78 108.93 + 18611000000 0 0 0 1703000000 993230000 485040000 892580000 8160100000 643700000 516460000 984270000 2352900000 1195600000 497690000 186680000 23976 1354 21914 201782;201783;201784;201785;201786;201787;201788;201789;201790;201791;201792;201793;201794;201795;201796;201797;201798;201799;201800;201801;201802;201803;201804;201805;201806;201807;201808;201809;201810;201811;201812;201813;201814;201815;201816;201817;201818;201819;201820;201821;201822;201823;201824;201825;201826;201827;201828 161167;161168;161169;161170;161171;161172;161173;161174;161175;161176;161177;161178;161179;161180;161181;161182;161183;161184;161185;161186;161187;161188;161189;161190;161191;161192;161193;161194;161195;161196;161197;161198;161199;161200;161201;161202;161203;161204;161205;161206 161186 2058 26 IKFEMEQNLR Unmodified 1306.6704 0.67035637 1354 P35527;CON__P35527 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 72 7 9 5 6 20 5 4 4 6 3 2 1 72.458 72.492 2;3 2.6376E-23 65705 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 150.1 132.29 + 3727800000 0 0 0 93445000 113890000 106880000 72106000 1998200000 175420000 142650000 174790000 580190000 140190000 71995000 58105000 23977 1354 21914 201829;201830;201831;201832;201833;201834;201835;201836;201837;201838;201839;201840;201841;201842;201843;201844;201845;201846;201847;201848;201849;201850;201851;201852;201853;201854;201855;201856;201857;201858;201859;201860;201861;201862;201863;201864;201865;201866;201867;201868;201869;201870;201871;201872;201873;201874;201875;201876;201877;201878;201879;201880;201881;201882;201883;201884;201885;201886;201887;201888;201889;201890;201891;201892;201893;201894;201895;201896;201897;201898;201899;201900 161207;161208;161209;161210;161211;161212;161213;161214;161215;161216;161217;161218;161219;161220;161221;161222;161223;161224;161225;161226;161227;161228;161229;161230;161231;161232;161233;161234;161235;161236;161237;161238;161239;161240;161241;161242;161243;161244;161245;161246;161247;161248;161249;161250;161251;161252;161253;161254;161255;161256;161257;161258;161259;161260;161261;161262;161263;161264;161265;161266;161267;161268;161269;161270;161271;161272;161273;161274;161275;161276;161277;161278;161279;161280;161281;161282;161283;161284;161285;161286;161287;161288;161289;161290 161220 83 IKGEEFPLTLGR Unmodified 1358.7558 0.75580056 3577 Q8WWV3 RTN4IP1 Reticulon-4-interacting protein 1, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 71.277 71.489 3 0.0093978 82124 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 33.273 24.873 28412000 0 0 0 0 0 0 2378400 3077100 1643800 2580700 3940200 4810300 3107000 2877200 3997800 23978 3577 21915 201901;201902;201903;201904;201905;201906;201907;201908;201909 161291;161292;161293 161293 3 IKGEELSEANVR Unmodified 1343.7045 0.70449327 2391 Q14203 DCTN1 Dynactin subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 31.084 31.375 3 0.021041 33544 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 38.178 11.713 33622000 0 0 0 0 0 6004800 0 8833100 0 0 0 18784000 0 0 0 23979 2391 21916 201910;201911;201912 161294;161295;161296 161296 2 IKGEHPGLSIGDVAK Unmodified 1519.8358 0.83584179 883 P09429;B2RPK0 HMGB1;HMGB1P1 High mobility group protein B1;Putative high mobility group protein B1-like 1 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.19 3.31 5 1 20 4 1 1 1 1 1 2 2 2 2 2 1 2 1 3 47.313 45.973 2;3;4 9.3916E-10 50582 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 91.657 70.816 2119000000 1132100000 61644000 12718000 39720000 45406000 16956000 78675000 81166000 36576000 67287000 184780000 55869000 82151000 53935000 170050000 23980 883 21917 201913;201914;201915;201916;201917;201918;201919;201920;201921;201922;201923;201924;201925;201926;201927;201928;201929;201930;201931;201932;201933;201934;201935;201936;201937;201938 161297;161298;161299;161300;161301;161302;161303;161304;161305;161306;161307;161308;161309;161310;161311;161312;161313;161314;161315;161316;161317;161318;161319 161310 13 IKLSDEPVEAK Unmodified 1227.6711 0.67106787 2794 Q5TBB1 RNASEH2B Ribonuclease H2 subunit B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 2 2 2 2 2 2 1 1 1 1 1 27.768 27.864 3 0.019361 27365 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 30.889 13.224 43324000000 0 0 0 6260800000 143570000 9632200000 6343700000 5036300000 10158000000 209560000 249750000 231460000 4875200000 0 183690000 23981 2794 21918 201939;201940;201941;201942;201943;201944;201945;201946;201947;201948;201949;201950;201951;201952;201953;201954;201955 161320;161321;161322;161323;161324;161325;161326;161327 161321 8 IKPDTNGAVVK Unmodified 1140.6503 0.65027285 5016 Q9UMR2 DDX19B ATP-dependent RNA helicase DDX19B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 20.231 20.475 3 0.0010835 21345 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 71.555 41.781 221620000 0 0 0 14872000 0 20521000 17135000 13321000 10981000 26563000 27383000 26064000 24859000 20612000 19311000 23982 5016 21919 201956;201957;201958;201959;201960;201961;201962;201963;201964;201965;201966 161328;161329;161330;161331 161328 4 IKPHLMSQELPEDWDK Oxidation (M) 1980.9615 0.96151259 838 P07237 P4HB Protein disulfide-isomerase yes yes 0 1 1 By MS/MS 2 0 2 2 68.727 60.432 3;4 3.801E-05 81115 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.01 77.872 204770000 204770000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23983 838 21920 201967;201968 161332;161333 161333 1026 2 IKPPTPAVSNVR Unmodified 1277.7456 0.74557022 28 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 0 0 1 By MS/MS 10 0 1 1 41.786 41.924 3 0.038012 46562 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 25.718 5.2909 7399100 0 0 0 0 0 0 0 0 7399100 0 0 0 0 0 0 23984 28 21921 201969 161334 161334 1 ILAAALTECHRK Unmodified 1381.75 0.75000367 1495 P46060 RANGAP1 Ran GTPase-activating protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 1 2 2 2 2 2 2 33.617 33.803 3 0.00013551 39827 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 80.245 46.369 213120000 0 0 0 10442000 9871800 19771000 16609000 12768000 6944400 15074000 16831000 28777000 28866000 18085000 29085000 23985 1495 21922 201970;201971;201972;201973;201974;201975;201976;201977;201978;201979;201980;201981;201982;201983;201984;201985;201986;201987;201988;201989;201990;201991;201992 161335;161336;161337;161338;161339;161340;161341;161342;161343;161344;161345;161346;161347;161348;161349;161350 161341 16 ILAAIIMK Unmodified 871.5565 0.55649581 1766 P55265 ADAR Double-stranded RNA-specific adenosine deaminase yes yes 0 0 0 By matching By matching By matching By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 74.785 74.845 2 0.019843 85564 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.287 53.514 11017000 0 0 0 0 951390 1581500 1001600 0 0 0 0 0 1061300 1572400 4848800 23986 1766 21923 201993;201994;201995;201996;201997;201998 161351 161351 1 ILACDDLDEAARMVVK Unmodified 1817.9016 0.90155487 4827 Q9P2R7 SUCLA2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 85.182 81.574 3 0.00097146 101066 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 45.723 42.488 47264000 0 46077000 1186300 0 0 0 0 0 0 0 0 0 0 0 0 23987 4827 21924 201999;202000 161352 161352 1 ILADATAK Unmodified 801.45962 0.45961853 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 18.563 18.721 2 0.0075833 19492 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 89.142 22.107 301830000 0 0 0 18412000 18812000 37826000 22905000 16474000 16148000 41574000 26974000 0 25488000 23365000 53851000 23988 5187 21925 202001;202002;202003;202004;202005;202006;202007;202008;202009;202010;202011 161353;161354;161355;161356;161357;161358;161359;161360 161353 6 ILADLNQQAPAPAPAER Unmodified 1773.9373 0.93734675 5130 Q9Y2Y9 KLF13 Krueppel-like factor 13 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 61.289 61.09 2 0.0074274 70263 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 51.013 45.289 3855300 0 0 0 0 1995800 0 1859400 0 0 0 0 0 0 0 0 23989 5130 21926 202012;202013 161361;161362 161362 2 ILADLNQQAPAPAPAERR Unmodified 1930.0385 0.038457777 5130 Q9Y2Y9 KLF13 Krueppel-like factor 13 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 54.001 54.218 3 3.6601E-05 61416 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 62.765 45.065 33379000 0 0 0 0 0 0 8115600 0 0 10186000 15077000 0 0 0 0 23990 5130 21927 202014;202015;202016 161363;161364;161365 161364 3 ILADPSDDTK Unmodified 1073.5241 0.52406928 1802 P58107 EPPK1 Epiplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 26.034 26.259 2 0.0040734 28528 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 74.173 19.623 65564000 0 0 0 11554000 5134600 0 5973600 6191500 3634600 0 5872700 9566800 7291700 4876700 5467300 23991 1802 21928 202017;202018;202019;202020;202021;202022;202023;202024;202025;202026;202027 161366;161367;161368;161369 161369 4 ILADPVR Unmodified 782.46504 0.46503826 5287 Q9Y6J9 TAF6L TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L yes yes 0 0 0 By MS/MS 10 0 1 1 17.67 17.825 2 0.044016 17704 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 66.994 8.3328 1429500 0 0 0 0 0 0 0 0 1429500 0 0 0 0 0 0 23992 5287 21929 202028 161370 161370 1 ILADQQDK Unmodified 929.48181 0.48181054 5086 Q9Y265 RUVBL1 RuvB-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 12.056 11.354 2 1.5622E-12 10861 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 170.06 70.14 1642100000 80072000 945140000 5361300 39111000 33628000 50892000 45079000 40170000 37387000 53646000 59021000 71853000 54142000 53143000 73419000 23993 5086 21930 202029;202030;202031;202032;202033;202034;202035;202036;202037;202038;202039;202040;202041;202042;202043;202044 161371;161372;161373;161374;161375;161376;161377;161378;161379;161380;161381;161382;161383;161384;161385;161386;161387;161388;161389;161390 161387 20 ILAEGGGAK Unmodified 814.45487 0.45486751 1572 P49411 TUFM Elongation factor Tu, mitochondrial yes yes 0 0 0 By matching By MS/MS By matching 2.25 0.433 3 1 1 2 1 14.672 11.357 2 0.0076033 15269 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.47 24.072 400060000 3939900 388140000 7985500 0 0 0 0 0 0 0 0 0 0 0 0 23994 1572 21931 202045;202046;202047;202048 161391;161392;161393 161392 3 ILAEYPDGR Unmodified 1032.524 0.52400971 2724 Q5FWF5 ESCO1 N-acetyltransferase ESCO1 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 39.74 40.198 2 0.0052193 44282 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 79.906 54.984 32129000 0 0 0 0 0 0 0 0 0 3949800 8859500 19320000 0 0 0 23995 2724 21932 202049;202050;202051 161394;161395 161395 2 ILAGLGFDPEMQNRPTQK Unmodified 2014.0306 0.030595207 3421 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 75.358 75.45 3 7.3485E-08 86980 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 82.248 66.656 47227000 0 0 0 0 2456300 6646400 2261900 6952700 5038300 4913900 4805800 8566100 0 5585400 0 23996 3421 21933 202052;202053;202054;202055;202056;202057;202058;202059;202060 161396;161397;161398;161399;161400;161401;161402;161403 161396 7 ILAGLGFDPEMQNRPTQK Oxidation (M) 2030.0255 0.025509829 3421 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 yes yes 0 1 1 By MS/MS 10 0 1 1 70.057 70.221 3 1.9639E-05 80426 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 64.454 45.52 15776000 0 0 0 0 0 0 0 0 15776000 0 0 0 0 0 0 23997 3421 21933 202061 161404 161404 4965 1 ILAHNNFVGR Unmodified 1139.62 0.61997578 153;4768 O00425;Q9NZI8 IGF2BP3;IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 3;Insulin-like growth factor 2 mRNA-binding protein 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.14 35.321 3 0.0045347 38975 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 63.216 39.897 147150000 0 0 0 5885900 7514600 11100000 8850000 13217000 9473400 10324000 11235000 17872000 20971000 10830000 19874000 23998 153;4768 21934 202062;202063;202064;202065;202066;202067;202068;202069;202070;202071;202072;202073 161405;161406;161407;161408;161409;161410;161411;161412;161413;161414;161415;161416 161409 12 ILAIELENLK Unmodified 1154.6911 0.69107503 6 A0MZ66 KIAA1598 Shootin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 83.459 82.341 2 0.001058 100365 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 112.84 43.244 278800000 38882000 50082000 80166000 2882900 4219200 6675600 6856600 4904500 6921500 9594700 11237000 8448500 5659400 11471000 30796000 23999 6 21935 202074;202075;202076;202077;202078;202079;202080;202081;202082;202083;202084;202085;202086;202087;202088;202089 161417;161418;161419;161420;161421;161422;161423;161424;161425;161426;161427;161428;161429;161430;161431;161432;161433;161434 161428 18 ILAIGLINEALDEGDAQK Unmodified 1882.0048 0.004757612 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.65 1.63 1 22 1 2 2 2 2 2 2 2 2 2 2 2 94.489 94.207 2;3 4.7949E-20 109773 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 146.5 135.29 106300000 14659000 0 0 5114000 3977600 3607200 2142100 2847900 2837200 27142000 13488000 4821100 0 2964500 22703000 24000 1518 21936 202090;202091;202092;202093;202094;202095;202096;202097;202098;202099;202100;202101;202102;202103;202104;202105;202106;202107;202108;202109;202110;202111;202112 161435;161436;161437;161438;161439;161440;161441;161442;161443;161444;161445;161446;161447;161448;161449;161450;161451;161452 161444 17 ILALVPETIHDELQQSFQK Unmodified 2208.179 0.17903358 1582 P49642 PRIM1 DNA primase small subunit yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 95.618 90.221 3 6.0344E-06 113920 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.148 55.721 29180000 13999000 15181000 0 0 0 0 0 0 0 0 0 0 0 0 0 24001 1582 21937 202113;202114;202115 161453;161454;161455 161455 3 ILANADTMK Unmodified 975.50592 0.5059168 3733 Q96A65 EXOC4 Exocyst complex component 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 30.96 30.46 2 0.0052332 31911 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 79.474 37.972 217080000 0 107590000 0 4356500 4205000 8405700 6270200 6773900 4384700 10990000 10823000 13636000 12109000 9874500 17660000 24002 3733 21938 202116;202117;202118;202119;202120;202121;202122;202123;202124;202125;202126;202127;202128;202129 161456;161457;161458;161459;161460;161461;161462;161463;161464;161465;161466;161467;161468;161469;161470;161471;161472;161473 161466 18 ILANADTMK Oxidation (M) 991.50083 0.50083142 3733 Q96A65 EXOC4 Exocyst complex component 4 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 19.688 16.015 2 0.0080834 21207 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.696 55.086 54038000 0 54038000 0 0 0 0 0 0 0 0 0 0 0 0 0 24003 3733 21938 202130;202131 161474;161475 161475 5302 2 ILAPYLEMK Oxidation (M) 1092.5889 0.58891815 3839 Q96FV9 THOC1 THO complex subunit 1 yes yes 0 1 0 By matching By MS/MS By MS/MS 2 0 3 1 1 1 69.938 63.988 2 0.014382 81532 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.906 66.64 73532000 13761000 50226000 9544800 0 0 0 0 0 0 0 0 0 0 0 0 24004 3839 21939 202132;202133;202134 161476 161476 5356 1 ILAPYTDFHYR Unmodified 1394.6983 0.69828568 2966 Q6R327 RICTOR Rapamycin-insensitive companion of mTOR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.853 69.93 3 0.0049329 80305 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 53.237 43.704 76649000 0 0 0 4314700 2878200 9764400 3556000 5972100 6746300 7126900 6925200 8939700 4715400 5298000 10412000 24005 2966 21940 202135;202136;202137;202138;202139;202140;202141;202142;202143;202144;202145;202146 161477;161478;161479;161480;161481;161482;161483;161484 161477 8 ILAQATSDLVNAIK Unmodified 1455.8297 0.82969378 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 81.381 81.484 2 5.1209E-33 93825 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 163.66 122.21 144610000 0 0 0 0 4704400 7489700 2937200 6510100 4206200 28735000 15458000 14308000 4931500 11087000 44244000 24006 5187 21941 202147;202148;202149;202150;202151;202152;202153;202154;202155;202156;202157 161485;161486;161487;161488;161489;161490;161491;161492;161493;161494;161495;161496 161490 12 ILAQDVAQLK Unmodified 1097.6445 0.64445919 632 O95239 KIF4A Chromosome-associated kinesin KIF4A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58.884 58.291 2 0.00021367 66169 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 131.06 76.905 750030000 0 405570000 9190100 22937000 14980000 28153000 23982000 18583000 22701000 30373000 33470000 36685000 32514000 26195000 44692000 24007 632 21942 202158;202159;202160;202161;202162;202163;202164;202165;202166;202167;202168;202169;202170;202171 161497;161498;161499;161500;161501;161502;161503;161504;161505;161506;161507;161508;161509;161510;161511;161512 161504 14 ILAQITGTEHLK Unmodified 1322.7558 0.75580056 3865 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 2 1 1 1 2 2 52.657 52.891 2;3 1.0025E-06 58461 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 101.71 82.053 131370000 0 0 0 3366900 0 7498400 8903900 8255700 6606900 11962000 21990000 16737000 9091600 8921300 28041000 24008 3865 21943 202172;202173;202174;202175;202176;202177;202178;202179;202180;202181;202182;202183;202184;202185 161513;161514;161515;161516;161517;161518;161519;161520;161521 161515 8 ILAQSASVEEVFR Unmodified 1447.7671 0.76709352 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.929 75.991 2 1.9541E-11 87725 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 141.95 106.73 161030000 0 0 0 4930800 9416400 12260000 10291000 14685000 10295000 20401000 14400000 23480000 13689000 10183000 16999000 24009 2556 21944 202186;202187;202188;202189;202190;202191;202192;202193;202194;202195;202196;202197 161522;161523;161524;161525;161526;161527;161528;161529;161530;161531;161532;161533 161527 12 ILAQSNNQQLR Unmodified 1283.6946 0.69459728 2433 Q14686 NCOA6 Nuclear receptor coactivator 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 28.347 28.633 2 0.00035674 29777 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 118.5 107.01 31623000 0 0 0 2691300 0 3406400 0 0 2838300 0 5565100 7301600 0 0 9820100 24010 2433 21945 202198;202199;202200;202201;202202;202203;202204;202205 161534;161535;161536;161537;161538;161539;161540 161535 7 ILAQVVGDVDTSLPR Unmodified 1581.8726 0.87262123 2481 Q15029 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 81.038 81.121 2 0.00089044 93456 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.522 69.863 33492000 0 0 0 0 4292700 0 0 0 0 6099200 6614700 3301200 2248000 3411800 7524000 24011 2481 21946 202206;202207;202208;202209;202210;202211;202212 161541;161542;161543;161544 161541 4 ILASAPNWK Unmodified 998.55492 0.5549159 156 O00443 PIK3C2A Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 52.84 53.007 2 0.020833 59700 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 52.786 25.081 55541000 0 0 0 0 4138800 9967800 0 3406200 3753100 12514000 10294000 0 0 6270700 5195900 24012 156 21947 202213;202214;202215;202216;202217;202218;202219;202220 161545 161545 1 ILATGANVILTTGGIDDMCLK Oxidation (M) 2191.1228 0.12284061 1067 P17987 TCP1 T-complex protein 1 subunit alpha yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 1 4 1 88.463 84.006 2;3 2.4453E-103 105076 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 174.62 145.81 851570000 59706000 782370000 9492100 0 0 0 0 0 0 0 0 0 0 0 0 24013 1067 21948 202221;202222;202223;202224;202225;202226 161546;161547;161548;161549;161550;161551 161547 1513 5 ILATGANVILTTGGIDDMCLK Unmodified 2175.1279 0.12792599 1067 P17987 TCP1 T-complex protein 1 subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 6 2 2 4 2 93.849 89.546 2;3 3.2042E-119 111238 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 195.2 173.14 233180000 66745000 137320000 29117000 0 0 0 0 0 0 0 0 0 0 0 0 24014 1067 21948 202227;202228;202229;202230;202231;202232;202233;202234 161552;161553;161554;161555;161556;161557;161558;161559;161560 161552 9 ILATMNPGGDFGK Oxidation (M) 1335.6493 0.64928657 4641 Q9NU22 MDN1 Midasin yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By matching 10 0 5 1 1 1 1 1 48.285 48.58 2 0.0025982 54846 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 51.436 40.216 17432000 0 0 0 0 0 0 3589900 0 0 4311500 0 0 0 4677900 4853200 24015 4641 21949 202235;202236;202237;202238;202239 161561;161562;161563 161561 6055 3 ILATNSELVGTLTR Unmodified 1486.8355 0.83550744 137 O00268 TAF4 Transcription initiation factor TFIID subunit 4 yes yes 0 0 0 By MS/MS 10 0 1 1 76.458 76.453 2 0.007165 88292 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 57.348 31.23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24016 137 21950 202240 161564 161564 1 ILATPPQEDAPSVDIANIR Unmodified 2019.0637 0.063669474 1249 P29401 TKT Transketolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.08 4 1 21 3 2 2 2 2 2 2 2 2 2 2 1 1 1 80.782 80.139 2;3 4.1536E-87 98476 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 176.91 169.19 3945900000 0 886650000 10950000 22019000 38432000 50331000 50656000 48709000 37341000 75287000 715410000 621850000 21513000 249570000 1117200000 24017 1249 21951 202241;202242;202243;202244;202245;202246;202247;202248;202249;202250;202251;202252;202253;202254;202255;202256;202257;202258;202259;202260;202261;202262;202263;202264;202265;202266 161565;161566;161567;161568;161569;161570;161571;161572;161573;161574;161575;161576;161577;161578;161579;161580;161581;161582 161568 16 ILATPPQEDAPSVDIANIRMPSLPSYK Unmodified 2922.5161 0.51609414 1249 P29401 TKT Transketolase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 4 1 2 1 94.713 89.638 3 2.5719E-21 112179 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.881 77.586 109120000 42787000 61505000 4822900 0 0 0 0 0 0 0 0 0 0 0 0 24018 1249 21952 202267;202268;202269;202270 161583;161584;161585 161584 3 ILAVNGQDVR Unmodified 1083.6037 0.60365701 2381 Q14160 SCRIB Protein scribble homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.731 41.899 2 0.0023779 45459 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.213 57.944 180280000 0 0 0 13631000 9677400 10873000 14650000 12883000 10536000 22468000 20807000 22730000 17559000 0 24469000 24019 2381 21953 202271;202272;202273;202274;202275;202276;202277;202278;202279;202280;202281;202282 161586;161587;161588;161589;161590;161591;161592;161593;161594;161595;161596;161597 161589 12 ILAYTEGLHGK Unmodified 1200.6503 0.65027285 1638 P50851 LRBA Lipopolysaccharide-responsive and beige-like anchor protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 5 2 1 2 50.36 44.453 2;3 0.0002242 55710 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 96.015 66.928 341100000 262110000 28867000 50124000 0 0 0 0 0 0 0 0 0 0 0 0 24020 1638 21954 202283;202284;202285;202286;202287 161598;161599;161600;161601;161602;161603 161602 4 ILCDVPCSGDGTMRK Unmodified 1707.7742 0.77424587 2168 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 41.62 42.024 3 0.0020396 46010 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 35.35 27.569 23080000 0 0 0 0 0 0 0 0 2152700 0 5805200 0 0 4937200 10185000 24021 2168 21955 202288;202289;202290;202291 161604;161605;161606 161606 3 ILCEELGAPANSAVNCVPLEDFGGHHPDPNLTYAADLVETMK Unmodified 4564.1349 0.13488522 1380 P36871 PGM1 Phosphoglucomutase-1 yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 97.263 91.559 4 2.1195E-183 115659 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 153.24 145.63 88543000 64541000 24002000 0 0 0 0 0 0 0 0 0 0 0 0 0 24022 1380 21956 202292;202293 161607;161608;161609 161609 3 ILCEELGAPANSAVNCVPLEDFGGHHPDPNLTYAADLVETMK Oxidation (M) 4580.1298 0.12979984 1380 P36871 PGM1 Phosphoglucomutase-1 yes yes 0 1 0 By MS/MS 2 0 1 1 95.632 87.502 4 5.1836E-11 113145 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 41.564 38.941 14720000 14720000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24023 1380 21956 202294 161610 161610 2141 1 ILCEQCMTSNQK Oxidation (M) 1526.6527 0.65273375 3594 Q8WXI9 GATAD2B Transcriptional repressor p66-beta yes yes 0 1 0 By MS/MS 2 0 1 1 21.153 17.44 2 0.0051015 22885 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.243 61.079 10401000 0 10401000 0 0 0 0 0 0 0 0 0 0 0 0 0 24024 3594 21957 202295 161611 161611 5091 1 ILCEQCMTSNQK Unmodified 1510.6578 0.65781912 3594 Q8WXI9 GATAD2B Transcriptional repressor p66-beta yes yes 0 0 0 By MS/MS 2 0 1 1 36.406 31.558 2 3.0365E-05 41173 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.22 93.698 28160000 0 28160000 0 0 0 0 0 0 0 0 0 0 0 0 0 24025 3594 21957 202296 161612 161612 1 ILCFYGPPGVGK Unmodified 1306.6744 0.67437911 1379 P36776 LONP1 Lon protease homolog, mitochondrial yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 77.264 77.405 2 0.010589 89402 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 46.334 32.88 37995000 0 0 0 0 0 3206000 0 4692400 3329900 4961000 5072700 0 3429700 5349600 7954100 24026 1379 21958 202297;202298;202299;202300;202301;202302;202303;202304 161613;161614;161615;161616;161617;161618 161613 6 ILCPLDPK Unmodified 954.52084 0.52083858 4650 Q9NUP7 TRMT13 tRNA:m(4)X modification enzyme TRM13 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 17.071 17.182 2 0.020541 17448 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 62.714 18.022 70866000 0 0 0 0 12148000 0 21470000 0 18552000 0 18696000 0 0 0 0 24027 4650 21959 202305;202306;202307;202308 161619;161620 161620 2 ILCQEEQDAYRR Unmodified 1579.7413 0.74128948 1506 P46736 BRCC3 Lys-63-specific deubiquitinase BRCC36 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 30.632 30.877 3 5.0743E-05 33514 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 70.488 35.285 74694000 0 0 0 0 2683300 6727700 3864500 0 3920300 6997300 6479800 10862000 7636200 8556800 16966000 24028 1506 21960 202309;202310;202311;202312;202313;202314;202315;202316;202317;202318 161621;161622;161623;161624;161625;161626;161627;161628;161629 161622 9 ILDATPACLP Unmodified 1069.5478 0.54778161 5255 Q9Y5Y2 NUBP2 Cytosolic Fe-S cluster assembly factor NUBP2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 77.934 77.993 2 0.019444 93649 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.297 58.367 240020000 0 0 0 18491000 9493300 21034000 15843000 9776300 12821000 22550000 24261000 32415000 25906000 18243000 29184000 24029 5255 21961 202319;202320;202321;202322;202323;202324;202325;202326;202327;202328;202329;202330;202331 161630;161631;161632;161633;161634;161635;161636;161637 161632 5 ILDAVVAQEPLHR Unmodified 1459.8147 0.81471242 2481 Q15029 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 1 2 2 2 2 2 64.258 64.347 2;3 0.00021699 74327 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 65.563 56.512 987980000 0 0 0 45514000 48216000 88275000 61463000 61276000 59810000 15315000 92854000 139650000 84972000 97053000 193580000 24030 2481 21962 202332;202333;202334;202335;202336;202337;202338;202339;202340;202341;202342;202343;202344;202345;202346;202347;202348;202349;202350;202351;202352;202353;202354 161638;161639;161640;161641;161642;161643;161644;161645;161646;161647;161648;161649;161650;161651;161652;161653;161654;161655;161656;161657 161654 11 ILDDICVAK Unmodified 1045.5478 0.54778161 2485 Q15046 KARS Lysine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 62.327 56.642 2 0.0083733 75696 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.308 54.428 1983800000 38035000 1918900000 26841000 0 0 0 0 0 0 0 0 0 0 0 0 24031 2485 21963 202355;202356;202357;202358 161658;161659;161660;161661 161660 4 ILDDIFASLVQNK Unmodified 1474.8031 0.80314468 5193 Q9Y4C1 KDM3A Lysine-specific demethylase 3A yes yes 0 0 0 By MS/MS 10 0 1 1 94.176 94.317 2 0.011253 109376 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.79 31.919 1514200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1514200 24032 5193 21964 202359 161662 161662 1 ILDDLTLCK Unmodified 1089.574 0.57399637 94 CON__Q497I4 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 58.496 58.565 2 0.034652 66725 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 46.426 0.70789 + 15291000 0 0 0 0 1766400 4897000 2048500 0 3003000 0 0 3575600 0 0 0 24033 94 21965 202360;202361;202362;202363;202364 161663 161663 1 ILDDSDSNLSVVK Unmodified 1403.7144 0.71438925 32 A6NKT7;Q7Z3J3 RGPD3;RGPD4 RanBP2-like and GRIP domain-containing protein 3;RanBP2-like and GRIP domain-containing protein 4 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 54.937 54.291 2 4.1582E-09 61839 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 112.83 0 502100000 0 215550000 0 15684000 13789000 19313000 24135000 21551000 16462000 27156000 27576000 32734000 25734000 21980000 40434000 24034 32 21966 202365;202366;202367;202368;202369;202370;202371;202372;202373;202374;202375;202376;202377;202378;202379 161664;161665;161666;161667;161668;161669;161670;161671;161672;161673;161674;161675;161676;161677 161666 14 ILDDWGETCK Unmodified 1235.5492 0.54923818 1758 P55145 MANF Mesencephalic astrocyte-derived neurotrophic factor yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 58.379 53.039 2 9.1758E-06 67996 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 151.97 142.59 174600000 0 174600000 0 0 0 0 0 0 0 0 0 0 0 0 0 24035 1758 21967 202380;202381 161678 161678 1 ILDELTLCK Unmodified 1103.5896 0.58964643 87;52;111 CON__Q15323;CON__Q9UE12;Q15323;CON__REFSEQ:XP_986630;CON__O76013;O76013 KRT31;KRT36 Keratin, type I cuticular Ha1;Keratin, type I cuticular Ha6 no no 0 0 0 By MS/MS 10 0 1 1 68.985 69.451 2 0.012659 79170 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 92.439 34.88 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24036 87;111;52 21968 202382 161679 161679 1 ILDESHSIDK Unmodified 1155.5772 0.57716749 4517 Q9HCK8 CHD8 Chromodomain-helicase-DNA-binding protein 8 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 25.322 25.661 2 0.0069602 26690 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.04 48.889 19318000 0 0 0 0 0 6238900 0 0 0 0 0 9761300 0 3318000 0 24037 4517 21969 202383;202384;202385 161680;161681 161681 2 ILDFSATPDLPDQVLR Unmodified 1798.9465 0.94651445 5202 Q9Y4G8 RAPGEF2 Rap guanine nucleotide exchange factor 2 yes yes 0 0 0 By MS/MS 10 0 1 1 90.112 90.251 2 0.026624 104545 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 30.563 24.84 2034100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2034100 24038 5202 21970 202386 161682 161682 1 ILDHLTMIDNK Unmodified 1311.6857 0.68567208 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 66.262 64.154 3 0.003926 71618 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.225 45.693 37360000 10270000 5210300 0 0 0 0 0 0 3306400 0 3962900 0 0 6434700 8175800 24039 2361 21971 202387;202388;202389;202390;202391;202392 161683;161684 161683 2 ILDHQQQMTVLDQTK Unmodified 1796.9091 0.90908309 5201 Q9Y4G6 TLN2 Talin-2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 58.222 53.374 3 0.0098194 66363 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 39.685 35.467 21456000 0 10927000 10529000 0 0 0 0 0 0 0 0 0 0 0 0 24040 5201 21972 202393;202394 161685 161685 1 ILDIDNVDLAMGK Oxidation (M) 1431.7279 0.72793082 346 O43615 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 2 1 1 1 77.292 77.269 2 1.239E-13 89272 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 111.52 88.205 247230000 0 0 0 19396000 32562000 27578000 43072000 0 0 0 0 0 48745000 35357000 40515000 24041 346 21973 202395;202396;202397;202398;202399;202400;202401;202402;202403;202404;202405 161686;161687;161688;161689;161690;161691;161692;161693;161694;161695;161696 161694 430 10 ILDIDNVDLAMGK Unmodified 1415.733 0.7330162 346 O43615 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 83.507 83.571 2 4.9856E-08 96745 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 103.22 92.697 114750000 0 0 0 1366900 4464400 5921700 6010100 14675000 10365000 10139000 10946000 13687000 8138800 9828100 19208000 24042 346 21973 202406;202407;202408;202409;202410;202411;202412;202413;202414;202415;202416;202417 161697;161698;161699;161700;161701;161702;161703;161704;161705;161706;161707;161708;161709 161698 13 ILDILGETCK Unmodified 1160.6111 0.61111015 2532;2377 Q15424;Q14151 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 no no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 75.415 74.745 2 0.0021049 86215 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 101.9 69.056 897220000 0 451080000 21659000 24598000 25959000 27915000 30798000 30364000 27355000 36277000 41170000 50260000 32773000 42812000 54202000 24043 2532;2377 21974 202418;202419;202420;202421;202422;202423;202424;202425;202426;202427;202428;202429;202430;202431;202432 161710;161711;161712;161713;161714;161715;161716;161717;161718;161719;161720 161711 9 ILDLCAAPGGK Unmodified 1113.5852 0.58522975 3513 Q8TEA1 NSUN6 Putative methyltransferase NSUN6 yes yes 0 0 0 By MS/MS 2 0 1 1 63.36 57.452 2 0.024483 73752 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 56.258 31.439 35137000 0 35137000 0 0 0 0 0 0 0 0 0 0 0 0 0 24044 3513 21975 202433 161721 161721 1 ILDLLNEGSAR Unmodified 1199.651 0.65100113 2449 Q14807 KIF22 Kinesin-like protein KIF22 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 73.222 73.28 2 0.0079706 84413 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 62.823 39.394 88505000 0 0 0 4279700 7512100 8716400 5811200 8420500 5962600 10832000 9698100 8108100 6628300 0 12536000 24045 2449 21976 202434;202435;202436;202437;202438;202439;202440;202441;202442;202443;202444 161722;161723 161722 2 ILDLQLEFDEK Unmodified 1361.7078 0.70784731 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 2 1 1 89.268 84.51 2 4.5283E-09 106821 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 130.41 91.391 63535000 39674000 23136000 724310 0 0 0 0 0 0 0 0 0 0 0 0 24046 4819 21977 202445;202446;202447;202448 161724;161725;161726;161727 161727 3 ILDMCAAPGSK Oxidation (M) 1177.5471 0.54712969 2168 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 0 1 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.24 3.14 2 4 19 2 4 1 1 1 2 1 2 2 2 2 2 1 2 28.847 27.932 2 4.0602E-09 35022 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.85 116.08 346870000 584820 268030000 0 2955700 3379000 2843200 4664000 1791800 6845700 7987600 10250000 13023000 10363000 4069400 10084000 24047 2168 21978 202449;202450;202451;202452;202453;202454;202455;202456;202457;202458;202459;202460;202461;202462;202463;202464;202465;202466;202467;202468;202469;202470;202471;202472;202473 161728;161729;161730;161731;161732;161733;161734;161735;161736;161737;161738;161739 161731 3483 11 ILDMCAAPGSK Unmodified 1161.5522 0.55221507 2168 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 2 1 6 2 1 1 1 1 1 1 1 49.033 47.018 1;2 0.00048101 52442 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 83.869 73.003 68519000 0 11375000 4237100 0 6937300 0 0 0 0 0 18068000 0 14679000 13224000 0 24048 2168 21978 202474;202475;202476;202477;202478;202479;202480;202481;202482 161740;161741;161742;161743;161744;161745;161746;161747 161746 8 ILDNRISQK Unmodified 1085.6193 0.61930707 1338 P34949 MPI Mannose-6-phosphate isomerase yes yes 0 0 1 By MS/MS 2 0 1 1 29.121 23.5 2 0.034867 33075 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.57 42.328 19766000 19766000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24049 1338 21979 202483 161748 161748 1 ILDNTSEPQPGEAR Unmodified 1525.7372 0.73724996 1622 P50416 CPT1A Carnitine O-palmitoyltransferase 1, liver isoform yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 35.325 35.153 2 3.7963E-06 38370 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 93.058 76.032 7356000 0 0 0 1742900 2089200 0 1511500 2012300 0 0 0 0 0 0 0 24050 1622 21980 202484;202485;202486;202487;202488 161749;161750;161751;161752;161753 161751 5 ILDPEGLALGAVIASSK Unmodified 1652.9349 0.93488713 3277 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 93.438 93.568 2 0.0013378 108707 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 64.55 47.114 3663200 0 0 0 0 0 0 0 0 0 1931800 0 0 0 0 1731400 24051 3277 21981 202489;202490 161754 161754 0 ILDPNTGEPAPVLSSPPPADVSTFLAFPSPEK Unmodified 3289.6758 0.67582548 1495 P46060 RANGAP1 Ran GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 4.57 3.46 3 2 2 4 1 1 1 97.594 94.984 3;4 1.4399E-35 113130 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 89.577 83.325 545810000 0 527560000 3856200 0 0 0 0 0 0 9189700 0 0 0 0 5203400 24052 1495 21982 202491;202492;202493;202494;202495;202496;202497 161755;161756;161757;161758;161759;161760;161761;161762;161763;161764 161762 9 ILDQGEDFPASEMTR Oxidation (M) 1723.7723 0.77231483 1260 P30040 ERP29 Endoplasmic reticulum resident protein 29 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 56.086 55.22 2 6.7434E-19 62368 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 106.49 87.249 293480000 0 175310000 3629400 4778400 5478200 7350100 8886600 5641000 5391100 8376700 12301000 15932000 6548900 10847000 23015000 24053 1260 21983 202498;202499;202500;202501;202502;202503;202504;202505;202506;202507;202508;202509;202510;202511;202512 161765;161766;161767;161768;161769;161770;161771;161772;161773;161774;161775;161776;161777;161778 161769 1857 14 ILDQGEDFPASEMTR Unmodified 1707.7774 0.77740021 1260 P30040 ERP29 Endoplasmic reticulum resident protein 29 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 70.305 69.539 2 3.3512E-41 87175 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 185.57 152.03 321790000 0 192270000 2990100 4341900 4986900 5570200 5525600 6090100 4188700 8724500 16125000 12179000 5731100 11834000 41236000 24054 1260 21983 202513;202514;202515;202516;202517;202518;202519;202520;202521;202522;202523;202524;202525;202526;202527 161779;161780;161781;161782;161783;161784;161785;161786;161787;161788;161789;161790;161791;161792 161782 13 ILDQGEDFPASEMTRIAR Oxidation (M) 2063.9946 0.99460363 1260 P30040 ERP29 Endoplasmic reticulum resident protein 29 yes yes 0 1 1 By MS/MS 2 0 1 1 64.731 60.975 3 0.00067534 75779 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 58.671 53.142 8121600 0 0 8121600 0 0 0 0 0 0 0 0 0 0 0 0 24055 1260 21984 202528 161793 161793 1857 0 ILDQSEAEK Unmodified 1031.5135 0.5135046 2444 Q14764 MVP Major vault protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18.819 18.375 2 0.019674 18998 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 53.775 30.251 190740000 5184600 99414000 0 8554500 5091300 4582600 5764300 5921200 3965900 7478200 4749000 11309000 8701000 6644100 13380000 24056 2444 21985 202529;202530;202531;202532;202533;202534;202535;202536;202537;202538;202539;202540;202541;202542 161794;161795;161796;161797;161798;161799;161800;161801;161802;161803 161795 6 ILDREVETPK Unmodified 1198.6558 0.65575216 2417 Q14574 DSC3 Desmocollin-3 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 31.594 31.769 3 0.045181 34709 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 47.844 18.886 92806000 0 0 0 17430000 3621500 4500700 4939800 26807000 3714300 5551700 10562000 7450000 5639200 0 2590100 24057 2417 21986 202543;202544;202545;202546;202547;202548;202549;202550;202551;202552;202553 161804 161804 0 ILDSAEFIK Unmodified 1034.5648 0.56481189 1977 P78347 GTF2I General transcription factor II-I yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.762 67.814 2 0.0030604 78195 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 91.853 45.483 3134400000 0 0 0 242950000 224750000 243900000 283900000 290130000 186880000 346360000 390270000 0 302620000 250160000 372440000 24058 1977 21987 202554;202555;202556;202557;202558;202559;202560;202561;202562;202563;202564;202565 161805;161806;161807;161808;161809;161810;161811;161812;161813;161814 161805 9 ILDSFAAAPVPTTTLVLK Unmodified 1856.0659 0.065901306 1074 P18583 SON Protein SON yes yes 0 0 0 By MS/MS 2 0 1 1 95.743 90.878 2 0.026451 112747 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 35.204 21.298 9738600 0 9738600 0 0 0 0 0 0 0 0 0 0 0 0 0 24059 1074 21988 202566 161815 161815 1 ILDSNEPCGGQK Unmodified 1316.6031 0.60306466 36 A8K2U0 A2ML1 Alpha-2-macroglobulin-like protein 1 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 22.92 23.166 2 0.00057105 24007 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 93.111 79.757 18531000 0 0 0 13968000 0 0 0 0 0 0 0 0 0 0 4563200 24060 36 21989 202567;202568 161816 161816 1 ILDSVGIEADDDRLNK Unmodified 1771.8952 0.89520716 807 P05387 RPLP2 60S acidic ribosomal protein P2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.65 3.6 10 2 28 5 4 3 2 3 3 2 2 3 2 2 2 2 3 2 62.683 61.394 2;3 4.6371E-58 69594 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 191.29 166.44 3462800000 428970000 936830000 114980000 87701000 103210000 107580000 77538000 95272000 76974000 138550000 220540000 282090000 179870000 209570000 403100000 24061 807 21990 202569;202570;202571;202572;202573;202574;202575;202576;202577;202578;202579;202580;202581;202582;202583;202584;202585;202586;202587;202588;202589;202590;202591;202592;202593;202594;202595;202596;202597;202598;202599;202600;202601;202602;202603;202604;202605;202606;202607;202608 161817;161818;161819;161820;161821;161822;161823;161824;161825;161826;161827;161828;161829;161830;161831;161832;161833;161834;161835;161836;161837;161838;161839;161840;161841;161842;161843;161844;161845;161846;161847;161848;161849;161850;161851;161852;161853;161854;161855;161856;161857;161858;161859;161860;161861;161862;161863;161864;161865;161866 161834 47 ILDTERMLAK Unmodified 1188.6536 0.65364367 2111 Q05048 CSTF1 Cleavage stimulation factor subunit 1 yes yes 0 0 1 By MS/MS By matching 2 0 2 1 1 56.811 50.749 2 0.00024585 69323 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 124.74 35.601 35033000 33271000 0 1761500 0 0 0 0 0 0 0 0 0 0 0 0 24062 2111 21991 202609;202610 161867 161867 1 ILDTLGLLR Unmodified 1012.6281 0.62808085 4215 Q9BWU0 SLC4A1AP Kanadaptin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 83.541 83.649 2 0.0040478 96418 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.299 20.625 12221000 0 0 0 0 0 2427800 0 0 0 0 0 0 0 3039000 6753800 24063 4215 21992 202611;202612;202613 161868;161869;161870 161869 3 ILDVAQDLK Unmodified 1013.5757 0.57571092 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 63.582 63.635 2 0.013293 71649 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 60.019 15.67 105300000 0 0 0 17871000 0 0 17634000 0 0 0 0 0 0 35056000 34743000 24064 19 21993 202614;202615;202616;202617 161871 161871 1 ILDVASLEVLNEVNRR Unmodified 1839.0214 0.021410729 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 86.458 86.518 3 0.0012114 100063 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.294 38.172 15503000 0 0 0 1131100 0 0 0 0 1899900 4025300 2439100 0 0 0 6008000 24065 3641 21994 202618;202619;202620;202621;202622 161872;161873;161874;161875 161873 4 ILDVMLK Oxidation (M) 846.48848 0.48847582 4414 Q9H6E4 CCDC134 Coiled-coil domain-containing protein 134 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 58.704 58.71 2 0.039609 67012 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 54.787 11.786 25823000 0 0 0 2170800 2648000 3023400 3997400 2004000 2509700 2775500 3439300 0 3254700 0 0 24066 4414 21995 202623;202624;202625;202626;202627;202628;202629;202630;202631 161876 161876 1 ILDVMYSR Oxidation (M) 1011.5059 0.5059168 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.176 47.341 2 0.0045109 54148 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 94.114 65.013 405740000 0 0 0 21636000 23768000 28760000 28332000 22605000 25795000 45787000 36777000 46390000 45016000 32257000 48614000 24067 1986 21996 202632;202633;202634;202635;202636;202637;202638;202639;202640;202641;202642;202643 161877;161878;161879;161880;161881;161882;161883;161884;161885;161886;161887;161888;161889;161890 161889 3219 14 ILDVMYSR Unmodified 995.511 0.51100218 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.432 59.542 2 0.0048728 67885 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 109.01 77.077 498550000 0 0 0 25981000 22801000 31969000 27225000 28521000 24539000 38426000 52383000 63261000 39811000 56414000 87219000 24068 1986 21996 202644;202645;202646;202647;202648;202649;202650;202651;202652;202653;202654;202655 161891;161892;161893;161894;161895;161896;161897;161898;161899;161900;161901;161902 161891 12 ILDVNDNIPVVENK Unmodified 1580.841 0.84098675 2369 Q14126 DSG2 Desmoglein-2 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 75.533 75.123 2 1.775E-09 92326 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.93 90.645 56356000 0 22272000 0 1405500 2192500 2674300 2268400 2235000 0 3813200 4333500 7673100 3855600 3633000 0 24069 2369 21997 202656;202657;202658;202659;202660;202661;202662;202663;202664;202665;202666 161903;161904;161905;161906;161907;161908;161909;161910 161905 8 ILDWHVANTDK Unmodified 1310.6619 0.66190017 1392 P37837 TALDO1 Transaldolase yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 55.909 56.1 3 0.00057196 63567 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 77.64 60.473 96787000 0 0 0 3485500 0 2831000 0 0 1748000 2688800 11921000 9285700 0 12474000 52353000 24070 1392 21998 202667;202668;202669;202670;202671;202672;202673;202674 161911;161912;161913 161912 3 ILDWHVANTDKK Unmodified 1438.7569 0.75686319 1392 P37837 TALDO1 Transaldolase yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 46.396 46.939 3 0.00054263 51451 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.842 52.163 38055000 0 0 0 0 0 0 0 0 0 0 5163100 7553600 0 5088200 20250000 24071 1392 21999 202675;202676;202677;202678 161914;161915 161914 2 ILDYSCSQDRDTQK Unmodified 1727.7785 0.77846285 3701 Q93008 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 5.2 3.92 3 2 2 1 1 1 30.677 28.961 2;3 1.7649E-09 37662 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.23 96.317 104920000 0 66312000 3233800 0 0 0 0 0 0 0 0 0 0 9938300 25431000 24072 3701 22000 202679;202680;202681;202682;202683 161916;161917;161918;161919;161920 161916 4 ILDYSDK Unmodified 852.4229 0.42289868 4468 Q9H9A6 LRRC40 Leucine-rich repeat-containing protein 40 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 28.582 28.765 2 0.041071 31615 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 68.312 16.013 490040000 0 0 0 31241000 29392000 37973000 35805000 31748000 24011000 40723000 45119000 43118000 43451000 0 127460000 24073 4468 22001 202684;202685;202686;202687;202688;202689;202690;202691;202692;202693;202694 161921 161921 1 ILEAHQNVAQMSLIEAK Unmodified 1893.9982 0.99823245 3735 Q96AC1 FERMT2 Fermitin family homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 69.375 69.591 3 0.00027012 79145 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 59.606 40.773 99806000 0 0 0 0 0 14003000 0 7205000 0 15486000 0 14130000 0 13486000 35496000 24074 3735 22002 202695;202696;202697;202698;202699;202700 161922;161923;161924 161924 3 ILEAHQNVAQMSLIEAK Oxidation (M) 1909.9931 0.99314707 3735 Q96AC1 FERMT2 Fermitin family homolog 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 55.446 55.639 3 0.0013673 62354 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.614 34.492 68735000 0 0 0 0 3428100 0 6740200 6931600 0 15418000 0 12113000 0 8914700 15189000 24075 3735 22002 202701;202702;202703;202704;202705;202706;202707 161925 161925 5305 1 ILEAWEMNEK Unmodified 1261.6013 0.60127375 2727 Q5H9R7 PPP6R3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 65.735 65.836 2 0.0041248 75754 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 73.985 50.03 20447000 0 0 0 0 1116500 0 0 0 0 3321800 0 0 3874500 4627500 7506800 24076 2727 22003 202708;202709;202710;202711;202712 161926;161927;161928 161928 3 ILEDDLK Unmodified 844.4542 0.45419881 1839 P61221 ABCE1 ATP-binding cassette sub-family E member 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 37.419 37.549 2 0.023406 41839 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 86.866 17.434 79998000 0 0 0 6068400 3696600 8502300 4311600 6274300 4528300 8727300 8757000 15204000 6538300 7390300 0 24077 1839 22004 202713;202714;202715;202716;202717;202718;202719;202720;202721;202722;202723 161929;161930;161931;161932 161929 4 ILEDEPHSK Unmodified 1066.5295 0.52948901 183 O14497 ARID1A AT-rich interactive domain-containing protein 1A yes yes 0 0 0 By MS/MS 2 0 1 1 17.025 13.605 2 0.032081 18003 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.465 35.28 6579300 0 6579300 0 0 0 0 0 0 0 0 0 0 0 0 0 24078 183 22005 202724 161933 161933 1 ILEDNSIPQVK Unmodified 1254.682 0.68196691 937 P11177 PDHB Pyruvate dehydrogenase E1 component subunit beta, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 61.965 55.65 2 0.00045884 71601 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.2 62.548 150760000 5482000 145280000 0 0 0 0 0 0 0 0 0 0 0 0 0 24079 937 22006 202725;202726;202727;202728 161934;161935;161936;161937;161938 161934 5 ILEDSGFDEQQEFR Unmodified 1711.7689 0.76894402 398 O60343 TBC1D4 TBC1 domain family member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 66.937 66.765 2 1.2747E-13 77238 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 112.13 99.169 41854000 0 0 0 7678900 7334800 12801000 0 0 0 0 0 0 0 0 14039000 24080 398 22007 202729;202730;202731;202732 161939;161940;161941;161942 161940 4 ILEDTQFVDGYK Unmodified 1426.698 0.6980109 2463 Q14C86 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 70.129 68.641 2 2.6881E-05 78045 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 112.75 88.659 866860000 15894000 507570000 6323100 15900000 16919000 33664000 27506000 19373000 17424000 38547000 31820000 36946000 28505000 28537000 41938000 24081 2463 22008 202733;202734;202735;202736;202737;202738;202739;202740;202741;202742;202743;202744;202745;202746;202747;202748;202749 161943;161944;161945;161946;161947;161948;161949;161950;161951;161952;161953;161954;161955;161956;161957;161958;161959;161960;161961 161957 19 ILEDVVGVPEK Unmodified 1196.6653 0.66525421 5009 Q9ULW0 TPX2 Targeting protein for Xklp2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 2 1 1 1 1 1 1 1 1 66.775 65.962 2 0.00076664 75849 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 77.379 44.538 266160000 0 71181000 0 0 18043000 20414000 18674000 16879000 0 21118000 0 30135000 19537000 20606000 29574000 24082 5009 22009 202750;202751;202752;202753;202754;202755;202756;202757;202758;202759;202760;202761 161962;161963;161964;161965;161966;161967;161968;161969;161970;161971;161972;161973;161974;161975;161976 161971 15 ILEEDLEQIK Unmodified 1228.6551 0.65508346 4179 Q9BV73 CEP250 Centrosome-associated protein CEP250 yes yes 0 0 0 By MS/MS 2 0 1 1 69.91 64.042 2 0.02346 81626 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.676 32.89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24083 4179 22010 202762 161977 161977 1 ILEEEEVLGGGGQGR Unmodified 1541.7686 0.76855009 178 O00750 PIK3C2B Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit beta yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.619 59.729 2 6.5184E-28 67396 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 138.76 121.29 65704000 0 0 0 3678500 3787000 5607700 4044100 3347300 3802400 5090600 6896400 6694200 7334000 6570800 8851000 24084 178 22011 202763;202764;202765;202766;202767;202768;202769;202770;202771;202772;202773;202774 161978;161979;161980;161981;161982;161983;161984;161985;161986;161987 161980 9 ILEEFDVEEQSSTMLGK Unmodified 1953.9241 0.92412403 3534 Q8WU10 PYROXD1 Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 85.311 78.874 2 6.1506E-08 100928 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 105.17 81.566 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24085 3534 22012 202775;202776 161988;161989 161989 2 ILEEFRK Unmodified 933.52837 0.5283668 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.086 36.266 2 0.045479 40045 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 128.75 0 5268400000 0 0 0 8257600 11865000 24027000 336010000 476870000 292400000 921610000 1226900000 1925600000 11751000 13680000 19353000 24086 4226 22013 202777;202778;202779;202780;202781;202782;202783;202784;202785;202786;202787;202788 161990 161990 0 ILEEIDTLILPENFK Unmodified 1785.9764 0.9764176 4070 Q99933 BAG1 BAG family molecular chaperone regulator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 6 2 1 5 2 97.686 93.447 2;3 8.9003E-31 115695 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 166.16 141.82 271870000 43407000 220510000 7957800 0 0 0 0 0 0 0 0 0 0 0 0 24087 4070 22014 202789;202790;202791;202792;202793;202794;202795;202796 161991;161992;161993;161994;161995;161996;161997;161998;161999 161992 9 ILEEIKQER Unmodified 1156.6452 0.64518747 3575 Q8WWL2 SPIRE2 Protein spire homolog 2 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 31.566 31.391 3 0.027193 34410 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 37.191 11.953 10206000 0 0 0 5063500 0 5142700 0 0 0 0 0 0 0 0 0 24088 3575 22015 202797;202798 162000 162000 1 ILEEPHPLMFQK Unmodified 1480.7748 0.77482144 351 O43665 RGS10 Regulator of G-protein signaling 10 yes yes 0 0 0 By MS/MS 2 0 2 2 78.469 70.339 2;3 0.00041498 92415 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.744 70.687 129780000 129780000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24089 351 22016 202799;202800 162001;162002 162001 1 ILEEPHPLMFQK Oxidation (M) 1496.7697 0.76973606 351 O43665 RGS10 Regulator of G-protein signaling 10 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 70.253 64.284 3 0.0014865 78833 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 70.942 70.942 81932000 57242000 0 24689000 0 0 0 0 0 0 0 0 0 0 0 0 24090 351 22016 202801;202802 162003;162004 162004 436 1 ILEETQSHLIAVER Unmodified 1636.8784 0.87843489 3745 Q96AY4 TTC28 Tetratricopeptide repeat protein 28 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 59.774 59.898 3 0.0011855 68400 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 48.527 41.118 28868000 0 0 0 0 2297800 4259800 3626300 0 4189100 0 3807600 7365600 3321300 0 0 24091 3745 22017 202803;202804;202805;202806;202807;202808;202809;202810 162005;162006;162007;162008 162005 3 ILEFDYEMK Oxidation (M) 1202.5529 0.55292657 4183 Q9BVC3 DSCC1 Sister chromatid cohesion protein DCC1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 66.107 66.203 2 0.024017 75637 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 45.68 38.785 41952000 0 0 0 0 4750500 4779100 0 0 0 5105800 9929200 7098100 5751100 4538000 0 24092 4183 22018 202811;202812;202813;202814;202815;202816;202817;202818 162009;162010;162011;162012;162013 162011 5 ILEFFGLK Unmodified 965.5586 0.5586043 838 P07237 P4HB Protein disulfide-isomerase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 87.73 87.8 2 0.010456 101372 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.597 31.093 210910000 0 0 0 3907600 4438500 8024300 4505400 8097200 5844500 8406200 18599000 14858000 4165200 16027000 114030000 24093 838 22019 202819;202820;202821;202822;202823;202824;202825;202826;202827;202828;202829;202830 162014;162015;162016;162017;162018;162019;162020;162021;162022;162023;162024 162017 11 ILEFVGR Unmodified 832.48069 0.48068833 907;1617 P0DMM9;P0DMN0;P50226;P50225 SULT1A3;SULT1A4;SULT1A2;SULT1A1 Sulfotransferase 1A3;Sulfotransferase 1A4;Sulfotransferase 1A2;Sulfotransferase 1A1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.336 60.443 2 0.027575 68528 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 77.374 32.763 222770000 0 0 0 9902500 9609200 24717000 14517000 11939000 9989100 22960000 26417000 30935000 15107000 18578000 28094000 24094 907;1617 22020 202831;202832;202833;202834;202835;202836;202837;202838;202839;202840;202841;202842 162025;162026;162027;162028;162029;162030 162029 6 ILEGSGVDAK Unmodified 987.52368 0.52367535 5194 Q9Y4C2 TCAF1 TRPM8 channel-associated factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 25.838 25.951 2 0.016599 27742 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 49.444 14.195 43021000 0 0 0 2254700 4378000 6973300 4780400 0 4987500 0 0 0 1629800 8889400 9127300 24095 5194 22021 202843;202844;202845;202846;202847;202848;202849;202850 162031;162032;162033 162031 3 ILEGTETTK Unmodified 990.52334 0.523341 1997 P82650 MRPS22 28S ribosomal protein S22, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 18.881 18.545 2 0.0071283 18704 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 73.248 41.135 48526000 0 27123000 0 0 3384500 2526100 0 0 0 2960300 0 4129800 3822700 0 4579700 24096 1997 22022 202851;202852;202853;202854;202855;202856;202857 162034;162035;162036;162037;162038 162037 5 ILEHMPVSNQKPDTDEAEDPEK Unmodified 2521.1642 0.16424773 4168 Q9BUQ8 DDX23 Probable ATP-dependent RNA helicase DDX23 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.32 3.26 4 15 2 2 1 1 2 2 1 1 2 1 2 2 47.372 46.235 3;4 4.226E-12 63039 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.04 85.378 275150000 56719000 0 40839000 12896000 8110700 20826000 0 0 11121000 16970000 9955100 27850000 13205000 14119000 42543000 24097 4168 22023 202858;202859;202860;202861;202862;202863;202864;202865;202866;202867;202868;202869;202870;202871;202872;202873;202874;202875;202876 162039;162040;162041;162042;162043;162044 162041 6 ILEHMPVSNQKPDTDEAEDPEK Oxidation (M) 2537.1592 0.15916236 4168 Q9BUQ8 DDX23 Probable ATP-dependent RNA helicase DDX23 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching 8.67 2.98 2 10 1 1 2 1 1 2 1 2 1 34.17 33.6 3;4 3.9094E-07 36523 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 54.223 50.195 120400000 13693000 0 23216000 0 0 13603000 4210800 3441900 0 19950000 8678700 28360000 0 0 5245200 24098 4168 22023 202877;202878;202879;202880;202881;202882;202883;202884;202885;202886;202887;202888 162045;162046;162047;162048 162048 5660 4 ILEIEDLFSSLK Unmodified 1405.7704 0.77044757 3325 Q8N3R9 MPP5 MAGUK p55 subfamily member 5 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 100.07 91.938 2 3.0003E-05 118481 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.52 61.924 7132900 7132900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24099 3325 22024 202889;202890 162049;162050 162050 2 ILEIVGNIRK Unmodified 1153.7183 0.71829284 434 O60826 CCDC22 Coiled-coil domain-containing protein 22 yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 60.857 61.213 3 0.012827 69059 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.826 24.471 6437600 0 0 0 0 0 0 1574700 0 0 0 0 0 0 0 4862900 24100 434 22025 202891;202892 162051 162051 1 ILELDQELIK Unmodified 1212.6966 0.69655434 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.021 80.079 2 0.0014272 92391 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 91.867 51.865 328000000 0 0 0 11219000 14441000 28146000 18135000 20710000 21798000 37895000 33794000 34059000 25665000 28905000 53231000 24101 3676 22026 202893;202894;202895;202896;202897;202898;202899;202900;202901;202902;202903;202904 162052;162053;162054;162055;162056;162057;162058;162059;162060;162061;162062;162063 162054 12 ILELDQFK Unmodified 1004.5542 0.5542472 973 P12956 XRCC6 X-ray repair cross-complementing protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 73.451 73.552 2 0.031953 84930 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 54.611 11.742 211180000 0 0 0 11728000 0 13786000 12016000 0 12941000 18766000 23360000 45730000 24394000 14893000 33570000 24102 973 22027 202905;202906;202907;202908;202909;202910;202911;202912;202913;202914 162064 162064 1 ILELESSLEK Unmodified 1159.6336 0.63361973 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 67.222 67.254 2 0.020585 77337 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 58.955 32.353 41440000 0 0 0 0 5753900 6926500 0 0 0 0 0 0 11422000 0 17337000 24103 2291 22028 202915;202916;202917;202918 162065;162066 162066 2 ILELIESGK Unmodified 1000.5805 0.58046195 1527 P47895 ALDH1A3 Aldehyde dehydrogenase family 1 member A3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 71.586 65.718 2 0.0026386 83952 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.04 31.771 51977000 4449900 38443000 9084300 0 0 0 0 0 0 0 0 0 0 0 0 24104 1527 22029 202919;202920;202921 162067;162068;162069;162070 162067 4 ILELIESGKK Unmodified 1128.6754 0.67542497 1527 P47895 ALDH1A3 Aldehyde dehydrogenase family 1 member A3 yes yes 0 0 1 By MS/MS 2 0 1 1 65.029 56.74 2 0.016295 76292 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.948 33.272 4775800 4775800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24105 1527 22030 202922 162071 162071 1 ILELLRPDPNTGK Unmodified 1464.83 0.83002813 2528 Q15393 SF3B3 Splicing factor 3B subunit 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.65 1.63 1 22 1 1 1 2 2 2 2 2 2 2 2 2 2 67.903 67.686 2;3 5.8446E-21 76833 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 140.24 122.84 766090000 21486000 0 0 26054000 20356000 50615000 40425000 52813000 33835000 67007000 68780000 88147000 65578000 72875000 158120000 24106 2528 22031 202923;202924;202925;202926;202927;202928;202929;202930;202931;202932;202933;202934;202935;202936;202937;202938;202939;202940;202941;202942;202943;202944;202945 162072;162073;162074;162075;162076;162077;162078;162079;162080;162081;162082;162083;162084;162085;162086;162087 162076 15 ILELSGSSSEDSEK Unmodified 1479.694 0.69404774 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 4 1 1 1 1 1 1 1 1 1 1 1 1 43.434 41.86 2 9.379E-73 46510 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 190.15 175.01 1696100000 15201000 197280000 0 78035000 65726000 115600000 78401000 86438000 82081000 123160000 162580000 166750000 142990000 150450000 231450000 24107 1986 22032 202946;202947;202948;202949;202950;202951;202952;202953;202954;202955;202956;202957;202958;202959;202960;202961;202962 162088;162089;162090;162091;162092;162093;162094;162095;162096;162097;162098;162099;162100;162101;162102;162103;162104;162105;162106;162107;162108 162106 21 ILELVHDHLK Unmodified 1215.6976 0.69755739 1693 P52630 STAT2 Signal transducer and activator of transcription 2 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 36.367 36.695 3 0.046985 39844 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 34.387 1.0087 22468000 0 0 0 0 0 2840100 2295600 2366200 0 2030900 2430900 3265000 0 3033100 4205700 24108 1693 22033 202963;202964;202965;202966;202967;202968;202969;202970 162109 162109 1 ILENAASAQK Unmodified 1043.5611 0.56112349 5241 Q9Y5N6 ORC6 Origin recognition complex subunit 6 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19.942 19.487 2 3.6655E-06 20464 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 149.82 70.219 1018900000 2241000 54705000 0 64732000 61481000 67531000 88880000 71658000 63301000 97090000 102430000 111370000 86434000 65180000 81863000 24109 5241 22034 202971;202972;202973;202974;202975;202976;202977;202978;202979;202980;202981;202982;202983;202984 162110;162111;162112;162113;162114;162115;162116;162117;162118;162119;162120;162121;162122;162123;162124 162111 14 ILENSEDSSPECLF Unmodified 1638.7083 0.70831759 4617 Q9NRZ9 HELLS Lymphoid-specific helicase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.58 82.642 2 0.026419 95721 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 48.423 44.66 77221000 0 0 0 1709300 3825300 5883400 4690400 5393800 3127500 8349700 8099200 5965700 9544200 8763900 11869000 24110 4617 22035 202985;202986;202987;202988;202989;202990;202991;202992;202993;202994;202995;202996 162125 162125 1 ILENVEVK Unmodified 942.5386 0.53859714 2162 Q08752 PPID Peptidyl-prolyl cis-trans isomerase D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 42.739 42.869 2 0.011282 47673 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 77.282 30.201 187480000 0 0 0 12122000 10206000 0 15217000 10843000 13404000 17913000 31238000 0 13886000 19474000 43183000 24111 2162 22036 202997;202998;202999;203000;203001;203002;203003;203004;203005;203006 162126;162127;162128;162129;162130;162131;162132;162133;162134;162135 162126 10 ILEPHNGK Unmodified 906.49232 0.49231565 1068 P18031 PTPN1 Tyrosine-protein phosphatase non-receptor type 1 yes yes 0 0 0 By MS/MS 10 0 1 1 36.119 36.177 2 0.038808 39861 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 50.898 7.0396 6366300 0 0 0 0 0 0 6366300 0 0 0 0 0 0 0 0 24112 1068 22037 203007 162136 162136 1 ILEPPEGQDEGVWK Unmodified 1595.7831 0.78313752 5144 Q9Y3A3 MOB4 MOB-like protein phocein yes yes 0 0 0 By MS/MS 2 0 1 1 73.686 68.141 2 0.00090069 86400 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.913 67.86 49706000 0 49706000 0 0 0 0 0 0 0 0 0 0 0 0 0 24113 5144 22038 203008 162137;162138 162137 2 ILEQEEEEEQAGKPGEPSK Unmodified 2126.0015 0.0015227276 4230 Q9BXP5 SRRT Serrate RNA effector molecule homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 2 1 1 1 33.779 33.963 2;3 1.4953E-83 36938 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 154.12 140.08 658510000 0 0 0 30052000 30646000 52610000 40688000 36067000 29757000 56784000 110190000 73457000 55086000 47486000 95682000 24114 4230 22039 203009;203010;203011;203012;203013;203014;203015;203016;203017;203018;203019;203020;203021 162139;162140;162141;162142;162143;162144;162145;162146;162147;162148;162149;162150;162151;162152 162144 14 ILEQENEHLNQTVSSLR Unmodified 2009.0178 0.017781914 2676 Q3V6T2 CCDC88A Girdin yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 7 1 1 1 1 1 1 1 60.951 61.128 3 0.00088945 69759 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 44.005 28.851 24476000 0 0 0 0 1984600 2867500 0 0 1498100 3880600 4357700 5423700 0 0 4464000 24115 2676 22040 203022;203023;203024;203025;203026;203027;203028 162153;162154;162155 162154 2 ILEQIDK Unmodified 857.48583 0.48583328 3964 Q96R06 SPAG5 Sperm-associated antigen 5 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 34.933 35.248 2 0.023433 37903 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 85.359 10.843 122090000 0 0 0 0 0 0 0 47316000 0 0 74772000 0 0 0 0 24116 3964 22041 203029;203030 162156;162157 162156 2 ILEQPHAVLFVDEK Unmodified 1636.8825 0.88245763 4567 Q9NQC7 CYLD Ubiquitin carboxyl-terminal hydrolase CYLD yes yes 0 0 0 By MS/MS 2 0 1 1 76.762 74.072 3 0.0013567 90215 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 74.678 54.669 7394900 0 0 7394900 0 0 0 0 0 0 0 0 0 0 0 0 24117 4567 22042 203031 162158 162158 0 ILEQQNSSR Unmodified 1073.5465 0.54653606 2596 Q16181 SEPT7 Septin-7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 11.189 11.331 2 0.0037123 9746 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 101.54 55.116 126710000 0 0 0 5504800 4505400 5794400 7128800 5558700 5249300 13748000 22152000 21091000 8934300 5586300 21454000 24118 2596 22043 203032;203033;203034;203035;203036;203037;203038;203039;203040;203041;203042;203043 162159;162160;162161;162162;162163;162164;162165;162166;162167;162168;162169 162168 9 ILEREGEENEALHK Unmodified 1665.8322 0.83221298 3157 Q86UV5 USP48 Ubiquitin carboxyl-terminal hydrolase 48 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.8 3.92 2 3 1 1 1 1 1 27.954 26.419 3 0.00039526 37868 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.776 43.091 51862000 10436000 0 15363000 0 0 0 0 0 0 7347300 0 7290600 0 0 11425000 24119 3157 22044 203044;203045;203046;203047;203048 162170;162171;162172;162173;162174;162175 162172 6 ILESSQTLLSVLK Unmodified 1429.8392 0.83919583 368 O43805 SSNA1 Sjoegren syndrome nuclear autoantigen 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 88.596 87.29 2 3.0838E-25 109759 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 157.38 117.38 100270000 28638000 45252000 2311000 0 0 1649700 0 1358200 933150 2413500 3024400 2934000 0 3042100 8712700 24120 368 22045 203049;203050;203051;203052;203053;203054;203055;203056;203057;203058;203059 162176;162177;162178;162179;162180;162181;162182;162183 162177 8 ILESVAEGR Unmodified 972.52401 0.52400971 4941 Q9UJV9 DDX41 Probable ATP-dependent RNA helicase DDX41 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.51 34.693 2 0.0077155 38462 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 71.692 14.133 110790000 0 0 0 5733800 6194800 9675200 6744800 5152900 5903200 9378900 13052000 14879000 12550000 9295100 12226000 24121 4941 22046 203060;203061;203062;203063;203064;203065;203066;203067;203068;203069;203070;203071 162184;162185;162186 162186 3 ILETLYTLGK Unmodified 1149.6645 0.66452593 2836 Q5W0V3 FAM160B1 Protein FAM160B1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 3 9 1 1 1 1 1 1 1 1 1 1 1 1 78.955 77.436 2 0.0045335 98130 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.2 62.548 94428000 22783000 31903000 5946200 2292100 0 6175300 3402100 0 0 7754500 0 6522800 2811000 4837700 0 24122 2836 22047 203072;203073;203074;203075;203076;203077;203078;203079;203080;203081;203082;203083 162187;162188;162189;162190;162191;162192;162193;162194;162195;162196;162197;162198 162192 12 ILETTMTPTGIDTAK Oxidation (M) 1606.8124 0.81238874 5023 Q9UMZ2 SYNRG Synergin gamma yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 52.318 52.006 2 4.8041E-20 57739 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 111.63 90.76 103410000 0 21447000 0 5200600 2797200 5531700 5543300 4340900 6792000 10746000 6265600 10327000 9421400 6331700 8669600 24123 5023 22048 203084;203085;203086;203087;203088;203089;203090;203091;203092;203093;203094;203095;203096 162199;162200;162201;162202;162203;162204;162205;162206;162207;162208;162209;162210;162211;162212 162203 6363 14 ILETTMTPTGIDTAK Unmodified 1590.8175 0.81747411 5023 Q9UMZ2 SYNRG Synergin gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 66.107 65.604 2 2.4345E-15 82645 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.24 105.71 130320000 0 78300000 0 2205800 3266000 5287200 4136800 6751700 3340000 5179000 7428600 6868300 7552100 0 0 24124 5023 22048 203097;203098;203099;203100;203101;203102;203103;203104;203105;203106;203107 162213;162214;162215;162216;162217;162218;162219;162220;162221;162222;162223;162224 162216 11 ILETTTFFQR Unmodified 1254.6608 0.66083754 4751 Q9NYU2 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 75.252 75.34 2 0.00066113 85952 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 121.96 80.969 152080000 0 0 0 6933500 0 19076000 14301000 0 9092100 14409000 17144000 18427000 10102000 12843000 29757000 24125 4751 22049 203108;203109;203110;203111;203112;203113;203114;203115;203116;203117 162225;162226;162227;162228;162229;162230;162231;162232;162233;162234;162235 162231 11 ILETWGELLSK Unmodified 1287.7075 0.70745338 5171 Q9Y3P9 RABGAP1 Rab GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 4 1 2 1 90.762 85.669 2 0.010512 109406 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.19 27.168 70611000 30796000 37356000 2458800 0 0 0 0 0 0 0 0 0 0 0 0 24126 5171 22050 203118;203119;203120;203121 162236;162237;162238;162239 162238 4 ILEVHIDK Unmodified 965.55458 0.55458155 1303 P31689 DNAJA1 DnaJ homolog subfamily A member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 6 4 2 2 1 1 1 1 52.395 46.384 2 0.018206 58127 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 107.9 6.6113 131830000 42671000 0 89158000 0 0 0 0 0 0 0 0 0 0 0 0 24127 1303 22051 203122;203123;203124;203125 162240;162241;162242;162243 162243 3 ILEVHVDK Unmodified 951.53893 0.53893149 440 O60884 DNAJA2 DnaJ homolog subfamily A member 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.12 3.72 2 1 5 1 1 1 1 1 1 1 1 37.888 36.203 2 0.012189 46181 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 105.14 22.464 314540000 34243000 8196100 142070000 0 0 15226000 0 0 0 20134000 30528000 0 0 23106000 41034000 24128 440 22052 203126;203127;203128;203129;203130;203131;203132;203133 162244;162245;162246;162247;162248;162249;162250 162249 7 ILEVPESHTASELK Unmodified 1551.8144 0.81443765 5199 Q9Y4F3 KIAA0430 Meiosis arrest female protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 51.902 52.144 3 0.00032763 58018 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 68.277 58.765 61800000 0 0 0 0 3842200 0 6678700 5233800 0 6992400 8726200 10403000 7359600 6171500 6392400 24129 5199 22053 203134;203135;203136;203137;203138;203139;203140;203141;203142 162251;162252;162253;162254;162255 162253 5 ILEVSGVDLQNASHSEAVEAIK Unmodified 2308.1911 0.19105483 3466 Q8NI35 INADL InaD-like protein yes yes 0 0 0 By MS/MS 3 0 1 1 80.6 77.268 3 0.0022711 92713 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 37.884 23.27 4067700 0 4067700 0 0 0 0 0 0 0 0 0 0 0 0 0 24130 3466 22054 203143 162256;162257 162256 2 ILEYLDK Unmodified 892.49058 0.49058431 2932 Q6P3W7 SCYL2 SCY1-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 53.999 54.136 2 0.04888 61188 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 64.757 6.5901 94974000 0 0 0 3976100 3940100 7144200 4974100 11874000 5477900 9048700 5958600 11171000 8299300 6034700 17075000 24131 2932 22055 203144;203145;203146;203147;203148;203149;203150;203151;203152;203153;203154;203155 162258 162258 1 ILFFNDK Unmodified 895.48035 0.48035398 1242 P29084 GTF2E2 Transcription initiation factor IIE subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76.086 75.37 2 0.027727 97108 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.068 69.9 185170000 64815000 0 14281000 6415600 5505600 10503000 6215200 7385200 7167900 10817000 10570000 11370000 8212700 7281300 14633000 24132 1242 22056 203156;203157;203158;203159;203160;203161;203162;203163;203164;203165;203166;203167;203168;203169 162259;162260;162261;162262 162260 4 ILFFNTPK Unmodified 978.55385 0.55385327 1544 P48556 PSMD8 26S proteasome non-ATPase regulatory subunit 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.388 79.449 2 0.0011899 91684 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 150.17 105.72 819750000 0 0 0 43996000 59619000 81754000 35488000 45250000 23599000 115260000 108900000 167600000 36456000 36712000 65112000 24133 1544 22057 203170;203171;203172;203173;203174;203175;203176;203177;203178;203179;203180;203181 162263;162264;162265;162266;162267;162268;162269;162270;162271;162272;162273;162274;162275;162276 162270 14 ILFLDPSGK Unmodified 988.55933 0.55933258 704 O95881 TXNDC12 Thioredoxin domain-containing protein 12 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By matching By MS/MS 9.42 1.93 1 11 1 1 1 1 1 1 1 1 1 1 1 1 77.846 77.618 2 0.033862 92808 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 64.42 35.998 189930000 0 9565400 0 4707300 7726800 5549300 6557300 7603000 5045600 0 28371000 25733000 4539100 14603000 69927000 24134 704 22058 203182;203183;203184;203185;203186;203187;203188;203189;203190;203191;203192;203193 162277;162278;162279 162277 3 ILFNNAVK Unmodified 917.53345 0.53345218 864 P08243 ASNS Asparagine synthetase [glutamine-hydrolyzing] yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 51.789 51.83 2 0.0061524 58458 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 103.29 10.593 108150000 0 0 0 0 10498000 28595000 0 0 0 28372000 0 0 19383000 21304000 0 24135 864 22059 203194;203195;203196;203197;203198 162280;162281;162282;162283;162284;162285 162282 6 ILFQPQTNVYDSLAK Unmodified 1735.9145 0.91448604 593 O94855 SEC24D Protein transport protein Sec24D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 4 3.46 3 1 1 1 1 1 85.536 81.743 2 0.0010499 103481 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.187 82.083 99362000 39681000 43109000 3915100 0 0 0 0 0 0 0 0 0 0 0 12657000 24136 593 22060 203199;203200;203201;203202 162286;162287;162288;162289 162288 4 ILFSSREEQQDILSK Unmodified 1791.9367 0.93667805 234 O14976 GAK Cyclin-G-associated kinase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.692 65.777 3 3.6216E-07 74466 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.175 40.348 184030000 0 0 0 5856000 6747400 18676000 13060000 17173000 12977000 13547000 20098000 25343000 12392000 14074000 24090000 24137 234 22061 203203;203204;203205;203206;203207;203208;203209;203210;203211;203212;203213;203214 162290;162291;162292;162293;162294;162295;162296;162297;162298;162299;162300;162301;162302 162294 13 ILFTEATR Unmodified 949.52328 0.52328142 1544 P48556 PSMD8 26S proteasome non-ATPase regulatory subunit 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.727 51.875 2 0.0052431 58642 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 107.59 50.313 705420000 0 0 0 53447000 65854000 71978000 33824000 30842000 18957000 104090000 102860000 119790000 29633000 25767000 48376000 24138 1544 22062 203215;203216;203217;203218;203219;203220;203221;203222;203223;203224;203225;203226 162303;162304;162305;162306;162307;162308;162309;162310;162311;162312;162313;162314 162303 12 ILFVGPCESGK Unmodified 1205.6114 0.6114445 4438 Q9H7X7 IFT22 Intraflagellar transport protein 22 homolog yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 71.316 65.378 2 0.023896 86959 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.632 26.823 11657000 10184000 0 1472800 0 0 0 0 0 0 0 0 0 0 0 0 24139 4438 22063 203227;203228 162315 162315 1 ILFYDSEQDK Unmodified 1256.5925 0.5924832 455 O75116 ROCK2 Rho-associated protein kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.74 2.92 3 16 1 1 1 2 2 1 2 2 1 1 1 1 1 1 1 60.334 59.409 2 0.0029636 67945 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 78.334 48.525 217740000 13068000 100590000 3446300 10496000 4898100 8028900 7822200 9872800 3762900 6951300 9140600 7316700 7063000 6659100 18631000 24140 455 22064 203229;203230;203231;203232;203233;203234;203235;203236;203237;203238;203239;203240;203241;203242;203243;203244;203245;203246;203247 162316;162317;162318;162319;162320;162321;162322;162323;162324;162325;162326;162327;162328;162329 162318 12 ILFYHPNEVEK Unmodified 1387.7136 0.71360139 2020 P86791;P86790 CCZ1;CCZ1B Vacuolar fusion protein CCZ1 homolog;Vacuolar fusion protein CCZ1 homolog B yes no 0 0 0 By MS/MS 2 0 1 1 69.276 60.981 3 0.0049698 81304 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.513 35.882 41153000 41153000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24141 2020 22065 203248 162330 162330 1 ILFYNDEQDK Unmodified 1283.6034 0.60338224 2296 Q13464 ROCK1 Rho-associated protein kinase 1 yes yes 0 0 0 By MS/MS 2 0 1 1 63.463 57.555 2 0.0057229 73862 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.71 79.121 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24142 2296 22066 203249 162331 162331 1 ILGADTSVDLEETGR Unmodified 1574.7788 0.77878042 1192 P25705 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 65.884 66.076 2 0.0074203 75688 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.291 35.151 20135000 0 0 0 0 0 4308600 0 2782400 0 0 0 13044000 0 0 0 24143 1192 22067 203250;203251;203252 162332 162332 0 ILGDINSDFTRVDEDEEIIVK Unmodified 2419.2118 0.21184985 2020 P86791;P86790 CCZ1;CCZ1B Vacuolar fusion protein CCZ1 homolog;Vacuolar fusion protein CCZ1 homolog B yes no 0 0 1 By MS/MS 2 0 1 1 89.763 81.633 3 0.00016829 106064 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.181 46.72 28739000 28739000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24144 2020 22068 203253 162333;162334 162333 2 ILGDLSYR Unmodified 935.50763 0.50763136 4664 Q9NVC6 MED17 Mediator of RNA polymerase II transcription subunit 17 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.481 55.611 2 0.025168 61973 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.917 19.699 70675000 0 0 0 2806100 4271700 3873600 5257500 6014400 3843100 5442600 9958300 7608300 7635500 4695600 9268200 24145 4664 22069 203254;203255;203256;203257;203258;203259;203260;203261;203262;203263;203264;203265 162335;162336;162337;162338 162335 4 ILGEELGFVK Unmodified 1103.6227 0.62266112 49 CON__ENSEMBL:ENSBTAP00000032840 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 78.039 77.964 2 0.0070449 89999 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 63.419 8.8695 + 7562400 0 0 0 0 3469400 0 4093000 0 0 0 0 0 0 0 0 24146 49 22070 203266;203267 162339;162340 162339 2 ILGGFAPEHK Unmodified 1067.5764 0.57637963 2297 Q13470 TNK1 Non-receptor tyrosine-protein kinase TNK1 yes yes 0 0 0 By MS/MS 2 0 1 1 53.359 45.295 2 0.0093004 62339 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.679 28.83 9962200 9962200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24147 2297 22071 203268 162341 162341 1 ILGIPVIVTEQYPK Unmodified 1568.9178 0.91778051 3779 Q96CN7 ISOC1 Isochorismatase domain-containing protein 1 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 90.12 90.241 2 0.00082491 104565 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.32 52.949 8274800 0 0 0 0 0 0 0 0 0 0 0 0 0 1270600 7004200 24148 3779 22072 203269;203270 162342;162343 162343 2 ILGLAIESQDAGIK Unmodified 1426.8031 0.80314468 122 O00161 SNAP23 Synaptosomal-associated protein 23 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 79.292 79.472 2 4.6728E-06 91441 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.653 37.863 28873000 0 0 0 0 0 0 4326700 0 0 0 6214300 0 0 6475100 11857000 24149 122 22073 203271;203272;203273;203274 162344;162345;162346;162347;162348;162349 162346 6 ILGLAPSR Unmodified 825.50724 0.50723743 5012 Q9UM00 TMCO1 Transmembrane and coiled-coil domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 51.455 51.425 2 0.0069006 57850 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 91.626 38.072 43100000 0 0 0 5824800 6873800 8099800 5387500 8026000 0 0 0 0 0 0 8888200 24150 5012 22074 203275;203276;203277;203278;203279;203280;203281;203282;203283;203284;203285 162350;162351;162352;162353;162354;162355;162356;162357;162358;162359;162360 162356 11 ILGLGDLGCNGMGIPVGK Oxidation (M) 1785.9117 0.91172562 1534 P48163 ME1 NADP-dependent malic enzyme yes yes 0 1 0 By MS/MS 10 0 1 1 84.669 84.848 2 0.006012 97997 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.084 31.353 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24151 1534 22075 203286 162361 162361 2437 1 ILGLGDLGVYGMGIPVGK Oxidation (M) 1773.9699 0.96989243 1154 P23368 ME2 NAD-dependent malic enzyme, mitochondrial yes yes 0 1 0 By MS/MS 10 0 1 1 92.09 92.208 2 0.00068988 107100 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 49.5 33.247 1676500 0 0 0 0 0 0 0 0 0 1676500 0 0 0 0 0 24152 1154 22076 203287 162362 162362 1666 1 ILGLLDAYLK Unmodified 1117.6747 0.67469669 1211 P26641 EEF1G Elongation factor 1-gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 91.946 92.086 2 0.00495 106622 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.919 45.996 30281000 0 0 0 0 0 1485200 546420 842830 838980 4265500 2052800 1117700 623590 0 18508000 24153 1211 22077 203288;203289;203290;203291;203292;203293;203294;203295;203296 162363;162364;162365;162366 162365 4 ILGPAESDEFLAR Unmodified 1416.7249 0.72489436 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.778 74.842 2 8.0689E-13 86336 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 151.22 141.21 234130000 0 0 0 9229800 10145000 20926000 13371000 13303000 12272000 24493000 20990000 25239000 22426000 25269000 36466000 24154 2775 22078 203297;203298;203299;203300;203301;203302;203303;203304;203305;203306;203307;203308 162367;162368;162369;162370 162370 2 ILGPGLNK Unmodified 810.49634 0.49633839 1927 P62906 RPL10A 60S ribosomal protein L10a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 2 1 1 1 1 1 1 1 1 1 1 1 37.779 37.909 2 0.0052385 40609 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 127.66 65.319 1190900000 0 0 0 76759000 66094000 74132000 69095000 78767000 51985000 117750000 121810000 116660000 155510000 126060000 136260000 24155 1927 22079 203309;203310;203311;203312;203313;203314;203315;203316;203317;203318;203319;203320;203321 162371;162372;162373;162374;162375;162376;162377;162378;162379 162374 0 ILGPQGNTIK Unmodified 1039.6026 0.60259438 2138 Q07666 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 38.678 37.463 2 5.852E-05 48549 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.72 64.803 6393600000 1119500000 4028000000 46856000 81980000 79922000 109160000 127800000 93252000 80407000 0 123190000 135290000 125280000 107940000 135000000 24156 2138 22080 203322;203323;203324;203325;203326;203327;203328;203329;203330;203331;203332;203333;203334;203335;203336 162380;162381;162382;162383;162384;162385;162386;162387;162388;162389;162390;162391;162392;162393;162394;162395;162396;162397;162398 162383 15 ILGPSKPPPSTYNPHK Unmodified 1731.9308 0.93080481 3198 Q86XN7 PROSER1 Proline and serine-rich protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 34.958 35.197 4 0.012619 38918 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 34.395 27.814 159160000 0 0 0 8874400 0 16100000 9012500 14667000 11046000 12322000 12038000 23388000 18520000 10599000 22591000 24157 3198 22081 203337;203338;203339;203340;203341;203342;203343;203344;203345;203346;203347 162399 162399 1 ILGQEGDASYLASEISTWDGVIVTPSEK Unmodified 2964.4604 0.46041298 2206 Q12905 ILF2 Interleukin enhancer-binding factor 2 yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 2 2 2 2 98.203 93.281 3 5.1714E-146 116541 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 163.46 151.5 233360000 68913000 164450000 0 0 0 0 0 0 0 0 0 0 0 0 0 24158 2206 22082 203348;203349;203350;203351 162400;162401;162402;162403 162403 4 ILGSEGEPAFR Unmodified 1174.5982 0.59823728 3515 Q8TED1 GPX8 Probable glutathione peroxidase 8 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 52.005 52.682 2 0.0093582 58799 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.607 4.6053 53965000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53965000 24159 3515 22083 203352;203353 162404;162405 162405 2 ILGSGISSSSVLHGMVFK Unmodified 1817.971 0.97095506 1641 P50990 CCT8 T-complex protein 1 subunit theta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 87.766 83.491 3 4.0412E-08 106254 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.786 54.947 49036000 6026400 34589000 0 0 0 0 0 0 0 0 0 0 0 0 8421300 24160 1641 22084 203354;203355;203356 162406;162407;162408 162406 3 ILGSGISSSSVLHGMVFK Oxidation (M) 1833.9659 0.96586969 1641 P50990 CCT8 T-complex protein 1 subunit theta yes yes 0 1 0 By matching By matching By MS/MS 10 0 3 1 1 1 76.29 76.481 3 0.00029545 87778 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.537 38.493 47270000 0 0 0 0 0 0 0 4161000 0 7086700 0 0 0 0 36022000 24161 1641 22084 203357;203358;203359 162409 162409 2636 1 ILGSLYAASEDQEK Unmodified 1522.7515 0.75150304 2945 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.39 3.7 5 1 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 60.878 59.36 2;3 7.0647E-34 75732 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 154.66 133.29 734340000 18757000 316210000 29867000 15877000 17274000 17378000 21076000 23993000 16557000 30506000 38737000 39904000 38608000 41448000 68152000 24162 2945 22085 203360;203361;203362;203363;203364;203365;203366;203367;203368;203369;203370;203371;203372;203373;203374;203375;203376;203377 162410;162411;162412;162413;162414;162415;162416;162417;162418;162419;162420;162421;162422;162423;162424;162425;162426;162427;162428;162429;162430;162431;162432;162433;162434 162415 25 ILGTAGTEEGQK Unmodified 1202.6143 0.61428128 2153 Q08257 CRYZ Quinone oxidoreductase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 24.411 22.91 2 1.0839E-14 28829 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145.25 91.28 146050000 5901500 128220000 0 3243800 0 0 1378100 2228800 0 0 0 0 0 0 5078600 24163 2153 22086 203378;203379;203380;203381;203382;203383 162435;162436;162437;162438 162435 4 ILGTKPEEPLVLDHPQATLSTTPK Unmodified 2584.4112 0.41121836 2301 Q13495 MAMLD1 Mastermind-like domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 73.28 73.489 4 2.2625E-10 84207 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.488 57.61 155890000 0 0 0 0 0 29496000 0 0 31668000 0 26465000 40892000 0 0 27368000 24164 2301 22087 203384;203385;203386;203387;203388 162439;162440;162441;162442 162440 3 ILGTQEITAR Unmodified 1100.619 0.61897272 3321 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 47.625 47.933 2 0.0087229 53873 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 59.35 12.924 81842000 0 0 0 0 0 7879000 7505100 5944700 3942200 9068700 9657000 11041000 6826800 6941800 13035000 24165 3321 22088 203389;203390;203391;203392;203393;203394;203395;203396;203397;203398 162443;162444;162445;162446 162443 3 ILGVGISTGGR Unmodified 1028.5978 0.59784335 5075 Q9Y223 GNE Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase;UDP-N-acetylglucosamine 2-epimerase (hydrolyzing);N-acetylmannosamine kinase yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 58.135 58.631 2 0.011889 65830 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.091 3.6962 9519700 0 0 0 0 0 0 0 0 0 0 2247900 0 0 0 7271800 24166 5075 22089 203399;203400 162447 162447 1 ILHDFYIEK Unmodified 1176.6179 0.61791009 4425 Q9H6T3 RPAP3 RNA polymerase II-associated protein 3 yes yes 0 0 0 By MS/MS By matching 2 0 3 2 1 68.722 61.226 2;3 0.0072991 81571 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.233 57.204 95640000 80995000 14645000 0 0 0 0 0 0 0 0 0 0 0 0 0 24167 4425 22090 203401;203402;203403 162448;162449 162448 1 ILHGLGFTPAMQR Unmodified 1439.7707 0.77073911 4879 Q9UG63 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 69.585 69.834 3 0.0017387 79520 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.225 57.225 37212000 0 0 0 0 0 6499700 0 5216000 0 0 0 8449600 0 0 17047000 24168 4879 22091 203404;203405;203406;203407 162450 162450 1 ILHLLGQEGPK Unmodified 1203.6976 0.69755739 5267 Q9Y678 COPG1 Coatomer subunit gamma-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 2 1 2 1 1 2 54.586 54.855 2;3 1.4575E-05 62137 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 113.93 100.33 270110000 0 0 0 0 13207000 30517000 20057000 23298000 13826000 23777000 22920000 35527000 22854000 19227000 44902000 24169 5267 22092 203408;203409;203410;203411;203412;203413;203414;203415;203416;203417;203418;203419;203420;203421 162451;162452;162453;162454;162455;162456;162457;162458;162459;162460;162461;162462;162463;162464;162465 162457 13 ILHLQGEGDIVPK Unmodified 1417.7929 0.79291434 631 O95235 KIF20A Kinesin-like protein KIF20A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 63.123 63.317 3 0.0066292 71458 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.295 24.163 41058000 0 0 0 0 4306800 0 5349600 0 0 0 6229500 8630000 4282700 4364000 7895600 24170 631 22093 203422;203423;203424;203425;203426;203427;203428 162466;162467;162468 162466 3 ILHNDPEVEK Unmodified 1192.6088 0.60880197 3330;695 Q8N4C8;O95819 MINK1;MAP4K4 Misshapen-like kinase 1;Mitogen-activated protein kinase kinase kinase kinase 4 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 3 2 1 1 1 1 1 1 1 1 1 1 1 1 20.517 19.601 2;3 0.0010264 24492 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 80.102 50.629 173520000 0 64200000 37096000 6007900 4335400 6232400 4933200 5476100 4055700 5672900 8649000 7500200 5790700 5370200 8197200 24171 3330;695 22094 203429;203430;203431;203432;203433;203434;203435;203436;203437;203438;203439;203440;203441;203442;203443;203444;203445 162469;162470;162471;162472;162473;162474;162475;162476;162477;162478 162473 7 ILHVNGFNGEGGEEDPQAAR Unmodified 2108.9875 0.98754442 1938 P63092;Q5JWF2 GNAS Guanine nucleotide-binding protein G(s) subunit alpha isoforms short;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas yes no 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 53.305 53.961 3 1.2256E-07 60279 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.188 44.571 27789000 0 0 0 0 0 0 0 0 0 0 0 18194000 0 0 9595100 24172 1938 22095 203446;203447 162479 162479 1 ILIANTGMDTDK Oxidation (M) 1306.6439 0.64386684 1980 P78371 CCT2 T-complex protein 1 subunit beta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 6.12 3.89 9 3 12 2 9 1 1 1 1 1 1 1 1 1 1 1 1 1 42.118 39.961 2 2.7086E-14 52166 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 137.46 92.124 5548700000 128960000 3387700000 37217000 117350000 118470000 176240000 168810000 97152000 112590000 192170000 222740000 202160000 187850000 159560000 239730000 24173 1980 22096 203448;203449;203450;203451;203452;203453;203454;203455;203456;203457;203458;203459;203460;203461;203462;203463;203464;203465;203466;203467;203468;203469;203470;203471 162480;162481;162482;162483;162484;162485;162486;162487;162488;162489;162490;162491;162492;162493;162494;162495;162496;162497;162498;162499;162500;162501;162502;162503 162496 3194 22 ILIANTGMDTDK Unmodified 1290.649 0.64895222 1980 P78371 CCT2 T-complex protein 1 subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 2 1 1 1 1 1 54.208 52.798 2 2.3871E-16 60901 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 166.19 132.92 8800700000 213080000 4431500000 24684000 131590000 119280000 0 206470000 160530000 259830000 0 636900000 490770000 481100000 444930000 1200000000 24174 1980 22096 203472;203473;203474;203475;203476;203477;203478;203479;203480;203481;203482;203483;203484;203485;203486 162504;162505;162506;162507;162508;162509;162510;162511;162512;162513;162514;162515;162516;162517;162518;162519 162519 13 ILIATDVASR Unmodified 1057.6132 0.61315906 5294 Q9Y6V7 DDX49 Probable ATP-dependent RNA helicase DDX49 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 57.011 56.802 2 0.010434 65172 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 56.013 22.217 7721100 0 0 0 0 3138200 0 4582900 0 0 0 0 0 0 0 0 24175 5294 22097 203487;203488 162520;162521 162521 2 ILIEDSDQNLK Unmodified 1286.6718 0.67179615 193 O14617 AP3D1 AP-3 complex subunit delta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.581 51.73 2 0.00033197 58540 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 101.65 51.813 381380000 0 0 0 27044000 17442000 32385000 28425000 29475000 21844000 35965000 31606000 41187000 41137000 31410000 43463000 24176 193 22098 203489;203490;203491;203492;203493;203494;203495;203496;203497;203498;203499;203500 162522;162523;162524;162525;162526;162527;162528;162529;162530;162531;162532;162533;162534 162524 12 ILIEDWK Unmodified 915.50657 0.50656873 996 P14314 PRKCSH Glucosidase 2 subunit beta yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 8.47 3.07 2 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69.859 69.116 2 0.02375 88106 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.11 51.428 537380000 451740 181690000 100550000 7537400 5211100 14144000 8058700 10081000 12140000 18313000 33510000 32877000 15196000 26487000 71139000 24177 996 22099 203501;203502;203503;203504;203505;203506;203507;203508;203509;203510;203511;203512;203513;203514;203515 162535;162536;162537;162538;162539;162540;162541 162537 6 ILIENGVAER Unmodified 1112.619 0.61897272 4319 Q9H0A0 NAT10 N-acetyltransferase 10 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 47.868 47.847 2 0.0018135 53791 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 101.43 37.866 39499000 0 0 0 2370800 2270700 0 9776300 9421600 7470600 4087100 4101800 0 0 0 0 24178 4319 22100 203516;203517;203518;203519;203520;203521;203522 162542;162543;162544;162545;162546 162545 5 ILIFCQLK Unmodified 1033.5994 0.59942325 238 O14981 BTAF1 TATA-binding protein-associated factor 172 yes yes 0 0 0 By matching By matching By MS/MS By matching By matching 10 0 5 1 1 1 1 1 80.946 80.899 2 0.04249 93654 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 49.59 13.404 8892500 0 0 0 435600 601750 0 0 0 0 0 0 2658000 1595200 0 3601900 24179 238 22101 203523;203524;203525;203526;203527 162547 162547 1 ILIFSSR Unmodified 834.49634 0.49633839 3504 Q8TDN6 BRIX1 Ribosome biogenesis protein BRX1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.677 65.764 2 0.028147 74177 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.847 12.07 76433000 0 0 0 3481500 4217900 4489400 5265100 5601100 4101600 6391500 6558700 10366000 7041000 8490500 10429000 24180 3504 22102 203528;203529;203530;203531;203532;203533;203534;203535;203536;203537;203538;203539 162548;162549 162548 2 ILIGSSFPK Unmodified 960.56442 0.56441796 4991 Q9ULC6 PADI1 Protein-arginine deiminase type-1 yes yes 0 0 0 By MS/MS 10 0 1 1 68.18 67.515 2 0.037906 78039 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 45.081 13.146 6676600 0 0 0 6676600 0 0 0 0 0 0 0 0 0 0 0 24181 4991 22103 203540 162550 162550 1 ILIIGESGVGK Unmodified 1084.6492 0.64921022 4536 Q9NP72 RAB18 Ras-related protein Rab-18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67.563 66.799 2 0.00083155 88163 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.692 43.356 317110000 15474000 0 5054800 12892000 15680000 21297000 19636000 26925000 19048000 30677000 28195000 39473000 26020000 21052000 35691000 24182 4536 22104 203541;203542;203543;203544;203545;203546;203547;203548;203549;203550;203551;203552;203553;203554 162551;162552;162553;162554;162555;162556;162557;162558;162559;162560;162561;162562;162563;162564 162556 14 ILILEMDIGK Oxidation (M) 1159.6522 0.65224669 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 76.804 76.878 2 0.0072278 88716 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 55.064 20.811 63915000 0 0 0 0 5121900 0 6638200 0 5448300 12789000 11405000 0 11934000 10579000 0 24183 2556 22105 203555;203556;203557;203558;203559;203560;203561 162565 162565 4196 1 ILILGLDGAGK Unmodified 1068.6543 0.6542956 1416 P40616 ARL1 ADP-ribosylation factor-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.331 80.391 2 0.0016512 93288 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 71.349 46.426 1072200000 0 0 0 34181000 45102000 63044000 56377000 112280000 53763000 118510000 101940000 110230000 73847000 103160000 199740000 24184 1416 22106 203562;203563;203564;203565;203566;203567;203568;203569;203570;203571;203572;203573 162566;162567;162568;162569;162570;162571;162572;162573;162574;162575;162576;162577 162576 12 ILILQGLK Unmodified 896.60589 0.60588884 5044 Q9UNX4 WDR3 WD repeat-containing protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 78.5 78.604 2 0.0061524 90766 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 103.29 55.112 66594000 0 0 0 0 4831700 6021400 4244500 5547000 5012700 5256400 4543700 7957600 5727800 5140300 12311000 24185 5044 22107 203574;203575;203576;203577;203578;203579;203580;203581;203582;203583;203584 162578;162579;162580;162581;162582;162583;162584;162585;162586;162587;162588 162579 11 ILIQERYEK Unmodified 1190.6659 0.66592292 2539 Q15459 SF3A1 Splicing factor 3A subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.074 37.253 3 0.0029931 41130 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 74.92 43.426 241430000 0 0 0 12262000 10055000 10004000 17810000 17472000 19996000 17241000 20964000 39904000 20751000 19858000 35110000 24186 2539 22108 203585;203586;203587;203588;203589;203590;203591;203592;203593;203594;203595;203596 162589;162590;162591;162592;162593;162594;162595;162596;162597;162598;162599;162600 162597 12 ILIQHQK Unmodified 878.53379 0.53378653 352 O43670 ZNF207 BUB3-interacting and GLEBS motif-containing protein ZNF207 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14.443 13.875 2 0.023328 12986 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 91.093 48.32 1187300000 533030000 47012000 76112000 21923000 25890000 19797000 37414000 27356000 31889000 41404000 52024000 48266000 52398000 65697000 107050000 24187 352 22109 203597;203598;203599;203600;203601;203602;203603;203604;203605;203606;203607;203608;203609;203610;203611 162601;162602;162603;162604;162605;162606;162607;162608;162609;162610;162611;162612 162603 7 ILIQSDEETQRAK Unmodified 1529.8049 0.80493559 3765 Q96BW1 UPRT Uracil phosphoribosyltransferase homolog yes yes 0 0 1 By MS/MS 2 0 1 1 34.484 31.14 3 0.0010085 39385 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 68.034 56.058 7233600 0 0 7233600 0 0 0 0 0 0 0 0 0 0 0 0 24188 3765 22110 203612 162613 162613 1 ILITTVPPNLR Unmodified 1235.7602 0.76015765 2206 Q12905 ILF2 Interleukin enhancer-binding factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.913 77.972 2 0.0040305 89130 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.064 36.76 158210000 0 0 0 13569000 12208000 9701200 13120000 10394000 5916300 12936000 13930000 18137000 12090000 15663000 20546000 24189 2206 22111 203613;203614;203615;203616;203617;203618;203619;203620;203621;203622;203623;203624 162614;162615;162616;162617;162618;162619;162620;162621;162622;162623;162624;162625;162626;162627;162628;162629;162630;162631;162632;162633;162634 162618 20 ILITTVPPNLRK Unmodified 1363.8551 0.85512067 2206 Q12905 ILF2 Interleukin enhancer-binding factor 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.057 67.141 3 0.0040058 77071 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.543 40.199 102460000 0 0 0 4857000 4527400 12602000 3320800 4891100 7081300 11390000 6399700 9248000 7903900 6220100 24019000 24190 2206 22112 203625;203626;203627;203628;203629;203630;203631;203632;203633;203634;203635;203636 162635 162635 1 ILLAAAPTSK Unmodified 983.60153 0.60153174 2806 Q5VSL9;Q9ULQ0 STRIP1;STRIP2 Striatin-interacting protein 1;Striatin-interacting protein 2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.24 2 1 10 1 2 1 1 1 1 1 1 1 1 1 1 51.274 49.422 2 0.0019733 55724 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 97.635 28.252 365870000 121130000 140230000 0 0 0 0 10355000 0 0 14503000 0 22614000 17621000 13961000 25451000 24191 2806 22113 203637;203638;203639;203640;203641;203642;203643;203644;203645;203646;203647;203648;203649 162636;162637;162638;162639;162640;162641;162642;162643;162644;162645;162646;162647;162648;162649;162650 162637 15 ILLAELEQLK Unmodified 1168.7067 0.7067251 870 P08670 VIM Vimentin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.22 3.97 1 8 2 12 4 6 1 1 1 1 1 1 1 1 1 1 1 1 1 88.379 86.269 2 9.316E-06 107789 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.06 65.81 10408000000 2480200000 1740800000 799570000 100710000 249750000 357770000 288400000 350930000 396810000 738810000 580470000 571120000 247820000 396770000 1107900000 24192 870 22114 203650;203651;203652;203653;203654;203655;203656;203657;203658;203659;203660;203661;203662;203663;203664;203665;203666;203667;203668;203669;203670;203671;203672 162651;162652;162653;162654;162655;162656;162657;162658;162659;162660;162661;162662;162663;162664;162665;162666;162667;162668;162669;162670;162671;162672;162673;162674;162675;162676;162677;162678;162679;162680;162681;162682;162683;162684 162657 33 ILLAEVPTMAVEK Unmodified 1412.7949 0.79488818 260 O15160 POLR1C DNA-directed RNA polymerases I and III subunit RPAC1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 83.643 83.719 2 0.0009599 96515 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.385 47.598 80469000 0 0 0 0 5524200 9292400 5665300 0 0 0 18479000 0 0 14240000 27268000 24193 260 22115 203673;203674;203675;203676;203677;203678 162685;162686;162687 162687 3 ILLAEVPTMAVEK Oxidation (M) 1428.7898 0.7898028 260 O15160 POLR1C DNA-directed RNA polymerases I and III subunit RPAC1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 76.219 76.335 2 0.0038553 88330 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 48.284 31.613 132650000 0 0 0 0 9854900 0 0 8614000 10543000 17620000 20091000 18045000 15445000 13611000 18830000 24194 260 22115 203679;203680;203681;203682;203683;203684;203685;203686;203687 162688;162689;162690 162690 349 2 ILLANFLAQTEALMRGK Unmodified 1888.0604 0.060438772 829;93 P06744;CON__Q3ZBD7 GPI Glucose-6-phosphate isomerase no no 0 0 1 By MS/MS 2 0 1 1 102.73 98.014 3 5.2887E-26 121113 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.16 102.68 + 7826300 0 7826300 0 0 0 0 0 0 0 0 0 0 0 0 0 24195 829;93 22116 203688 162691 162691 1 ILLANFLAQTEALMRGK Oxidation (M) 1904.0554 0.055353394 829;93 P06744;CON__Q3ZBD7 GPI Glucose-6-phosphate isomerase no no 0 1 1 By MS/MS 3 0 1 1 96.717 93.44 3 7.3544E-05 111893 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 72.898 44.929 + 7833300 0 7833300 0 0 0 0 0 0 0 0 0 0 0 0 0 24196 829;93 22116 203689 162692 162692 126 1 ILLAVNGK Unmodified 826.52764 0.52763852 262 O15173 PGRMC2 Membrane-associated progesterone receptor component 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 48.494 48.576 2 0.011473 54657 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 76.847 35.926 34514000 0 0 0 5323800 2913100 0 4566400 4591100 0 0 6172700 0 6157400 0 4790100 24197 262 22117 203690;203691;203692;203693;203694;203695;203696 162693;162694;162695;162696;162697;162698;162699 162697 7 ILLDELSSTK Unmodified 1117.6231 0.62305505 3115 Q7Z6K3 PTAR1 Protein prenyltransferase alpha subunit repeat-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 74.885 69.73 2 0.0095205 87651 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.649 47.931 113020000 0 113020000 0 0 0 0 0 0 0 0 0 0 0 0 0 24198 3115 22118 203697 162700 162700 0 ILLDHEK Unmodified 866.48617 0.48616764 1733 P54136 RARS Arginine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 23.261 22.25 2 0.01947 28509 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 114.19 20.022 849990000 354980000 94511000 213760000 9559900 7008200 19572000 11111000 9912600 9919400 24089000 25457000 29617000 20247000 20247000 0 24199 1733 22119 203698;203699;203700;203701;203702;203703;203704;203705;203706;203707;203708;203709;203710;203711;203712 162701;162702;162703;162704;162705;162706;162707;162708;162709;162710;162711 162709 11 ILLDLEQALSSEGTQENK Unmodified 1987.011 0.010965202 2461 Q14999 CUL7 Cullin-7 yes yes 0 0 0 By MS/MS 2 0 1 1 92.022 87.112 2 2.6205E-19 108215 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 148.08 115.13 16050000 0 16050000 0 0 0 0 0 0 0 0 0 0 0 0 0 24200 2461 22120 203713 162712 162712 1 ILLDPNSEEVSEK Unmodified 1471.7406 0.740604 1655 P51531 SMARCA2 Probable global transcription activator SNF2L2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 58.861 57.44 2 3.2508E-18 72827 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.82 90.371 729750000 16219000 323800000 0 25355000 27869000 33582000 22600000 16367000 24320000 37873000 30329000 41999000 45202000 35045000 49190000 24201 1655 22121 203714;203715;203716;203717;203718;203719;203720;203721;203722;203723;203724;203725;203726;203727;203728;203729 162713;162714;162715;162716;162717;162718;162719;162720;162721;162722;162723;162724;162725;162726;162727;162728;162729;162730;162731;162732;162733;162734;162735 162719 23 ILLDSVQLK Unmodified 1027.6277 0.6277465 5104 Q9Y2I7 PIKFYVE 1-phosphatidylinositol 3-phosphate 5-kinase yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 77.902 74.153 2 0.0096112 92778 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.833 39.751 18845000 0 16994000 1850400 0 0 0 0 0 0 0 0 0 0 0 0 24202 5104 22122 203730;203731 162736 162736 1 ILLEELANSDPK Unmodified 1340.7187 0.71874635 5109 Q9Y2K7 KDM2A Lysine-specific demethylase 2A yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 79.662 75.992 2 0.0065329 94586 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.862 49.475 26161000 0 22314000 3846900 0 0 0 0 0 0 0 0 0 0 0 0 24203 5109 22123 203732;203733 162737 162737 1 ILLEESRAQQK Unmodified 1313.7303 0.73031409 3509 Q8TDY2 RB1CC1 RB1-inducible coiled-coil protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 35.266 30.398 3 0.0047756 38137 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 65.5 14.233 35924000 31955000 0 3969200 0 0 0 0 0 0 0 0 0 0 0 0 24204 3509 22124 203734;203735 162738;162739 162739 1 ILLEMGEFFQIQDDYLDLFGDPSVTGK Oxidation (M) 3105.4893 0.48927027 997 P14324 FDPS Farnesyl pyrophosphate synthase yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 101.17 95.324 3 2.7815E-34 120294 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98 92.34 64070000 64070000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24205 997 22125 203736;203737 162740;162741 162741 1351 2 ILLEMGEFFQIQDDYLDLFGDPSVTGK Unmodified 3089.4944 0.49435565 997 P14324 FDPS Farnesyl pyrophosphate synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.5 0.5 2 2 2 1 1 102.97 98.555 3 3.5482E-40 103673 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 106.04 99.881 160850000 157010000 2144800 1695000 0 0 0 0 0 0 0 0 0 0 0 0 24206 997 22125 203738;203739;203740;203741 162742;162743;162744;162745;162746;162747;162748;162749;162750;162751 162742 10 ILLENLGEASSQPSPTQSVQETVR Unmodified 2582.3188 0.31877454 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.546 79.604 3 8.6903E-77 91933 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 132.48 125.68 483060000 0 0 0 8328800 34543000 28281000 22700000 46205000 25065000 61579000 58200000 73588000 36782000 37825000 49965000 24207 3023 22126 203742;203743;203744;203745;203746;203747;203748;203749;203750;203751;203752;203753 162752;162753;162754;162755;162756;162757;162758;162759;162760;162761;162762;162763;162764 162752 13 ILLENVLK Unmodified 940.59572 0.59571809 2525 Q15386 UBE3C Ubiquitin-protein ligase E3C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 78.635 78.17 2 0.0215 98571 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.568 34.441 79313000 0 30090000 9893400 0 1731000 5951300 2169200 1691500 1745600 4656900 3344700 3773800 2408700 4660000 7197000 24208 2525 22127 203754;203755;203756;203757;203758;203759;203760;203761;203762;203763;203764;203765;203766 162765;162766;162767;162768 162766 4 ILLEVVK Unmodified 812.53714 0.53714057 4077 Q99996 AKAP9 A-kinase anchor protein 9 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 72.642 66.79 2 0.033071 82170 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 86.086 10.776 42493000 31941000 0 10552000 0 0 0 0 0 0 0 0 0 0 0 0 24209 4077 22128 203767;203768 162769 162769 1 ILLFGCEK Unmodified 978.52084 0.52083858 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.025 71.099 2 0.012186 80705 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.213 51.689 91636000 0 0 0 5234000 5200700 7316600 5711600 6366000 6267600 7610300 8638000 9100600 10500000 6341100 13350000 24210 2291 22129 203769;203770;203771;203772;203773;203774;203775;203776;203777;203778;203779;203780 162770;162771;162772;162773;162774;162775;162776 162770 7 ILLGEGPTNQK Unmodified 1168.6452 0.64518747 4908 Q9UHR6 ZNHIT2 Zinc finger HIT domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 43.128 43.251 2 0.000282 48463 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 90.64 24.761 141040000 0 0 0 8259200 8323700 12087000 13297000 9141900 13221000 17979000 16863000 0 12530000 10206000 19133000 24211 4908 22130 203781;203782;203783;203784;203785;203786;203787;203788;203789;203790;203791 162777;162778;162779;162780;162781;162782;162783;162784;162785 162780 8 ILLGGYQSR Unmodified 1005.5607 0.56072956 4010 Q99459 CDC5L Cell division cycle 5-like protein yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.23 49.389 2 0.0051384 55817 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 82.426 33.067 243820000 0 0 0 12402000 15811000 17883000 23732000 16225000 17404000 29768000 21826000 26986000 18334000 15367000 28083000 24212 4010 22131 203792;203793;203794;203795;203796;203797;203798;203799;203800;203801;203802;203803 162786;162787;162788;162789;162790 162790 5 ILLITEDLK Unmodified 1056.6431 0.64306221 2162 Q08752 PPID Peptidyl-prolyl cis-trans isomerase D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 81.037 79.918 2 0.0012735 96240 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 119.27 76.36 298510000 44908000 71515000 44684000 4130500 4642000 9952800 8450500 5639300 7800300 17210000 14685000 16414000 7088700 10604000 30787000 24213 2162 22132 203804;203805;203806;203807;203808;203809;203810;203811;203812;203813;203814;203815;203816;203817;203818;203819 162791;162792;162793;162794;162795;162796;162797;162798;162799;162800;162801;162802;162803 162797 13 ILLLCVGEAGDTVQFAEYIQK Unmodified 2366.2192 0.21918384 1589 P49721 PSMB2 Proteasome subunit beta type-2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 97.869 92.048 3 1.2467E-13 116320 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.165 84.149 24782000 24782000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24214 1589 22133 203820;203821 162804;162805 162805 2 ILLLFGETELSPTATPR Unmodified 1857.0248 0.024764773 3409 Q8NCF5 NFATC2IP NFATC2-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 92.995 93.134 2 1.1123E-09 108374 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 103.35 89.443 13995000 0 0 0 0 0 840040 1075400 1023400 985850 2794200 2005500 1731800 0 843810 2695000 24215 3409 22134 203822;203823;203824;203825;203826;203827;203828;203829;203830 162806;162807;162808;162809;162810;162811;162812;162813;162814;162815 162812 10 ILLLGLDNAGK Unmodified 1125.6758 0.67575932 1371 P36405 ARL3 ADP-ribosylation factor-like protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 81.173 81.014 2 1.7287E-05 93154 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 133.57 90.327 130930000 0 0 8277200 6321800 3947500 9848700 5861500 0 4204000 8832300 12366000 18774000 5946700 10263000 36289000 24216 1371 22135 203831;203832;203833;203834;203835;203836;203837;203838;203839;203840;203841;203842 162816;162817;162818;162819;162820;162821;162822;162823;162824;162825;162826;162827 162819 11 ILLLLEEK Unmodified 969.61103 0.6110338 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81.686 80.642 2 0.0043522 92981 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 111.01 42.093 121720000 14278000 1842000 16806000 3638200 4598300 8235700 5683600 4750300 6023800 10443000 7816300 11767000 6114600 7188300 12531000 24217 2193 22136 203843;203844;203845;203846;203847;203848;203849;203850;203851;203852;203853;203854;203855;203856;203857;203858 162828;162829;162830;162831;162832;162833;162834;162835;162836;162837;162838;162839;162840;162841;162842 162830 15 ILLNAGAEINSR Unmodified 1269.7041 0.70409934 472;3250 Q8IWZ3;O75179 ANKHD1;ANKRD17 Ankyrin repeat and KH domain-containing protein 1;Ankyrin repeat domain-containing protein 17 no no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 60.653 60.979 2 0.00066681 68698 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.228 55.326 18590000 0 0 0 0 0 0 0 0 1682400 2920700 1964200 3252400 0 2597300 6173100 24218 3250;472 22137 203859;203860;203861;203862;203863;203864 162843;162844;162845 162844 3 ILLNPQDK Unmodified 939.53893 0.53893149 746 P01833 PIGR Polymeric immunoglobulin receptor;Secretory component yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 39.602 39.713 2 0.025549 44201 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 58.604 26.669 118080000 0 0 0 7302400 4342500 6187100 3937600 6283300 2903400 62944000 8974100 6978200 8227600 0 0 24219 746 22138 203865;203866;203867;203868;203869;203870;203871;203872;203873;203874 162846;162847 162847 2 ILLQTIK Unmodified 827.54804 0.54803961 555 O75909 CCNK Cyclin-K yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 54.965 55.097 2 0.028147 61499 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 76.847 0 154570000 0 0 0 7775400 8885900 12446000 8717800 9928800 6361200 16451000 13974000 14800000 17203000 15828000 22202000 24220 555 22139 203875;203876;203877;203878;203879;203880;203881;203882;203883;203884;203885;203886 162848;162849 162848 2 ILLSPER Unmodified 826.49125 0.49125301 1179 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 42.98 43.11 2 0.038679 47032 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 69.383 17.811 68299000 0 0 0 5204300 3855100 0 4508900 6234500 3882100 7059400 7158800 0 7579000 9130500 13686000 24221 1179 22140 203887;203888;203889;203890;203891;203892;203893;203894;203895;203896 162850 162850 1 ILLSSGRDASLMVTNDGATILK Oxidation (M) 2290.2202 0.22024647 1980 P78371 CCT2 T-complex protein 1 subunit beta yes yes 0 1 1 By MS/MS 2 0 1 1 83.987 75.857 3 0.0010631 99064 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.202 46.915 65560000 65560000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24222 1980 22141 203897 162851 162851 3191 1 ILLSSGRDASLMVTNDGATILK Unmodified 2274.2253 0.22533185 1980 P78371 CCT2 T-complex protein 1 subunit beta yes yes 0 0 1 By MS/MS 2 0 1 1 88.152 80.022 3 6.7422E-22 104035 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 106.73 91.143 43766000 43766000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24223 1980 22141 203898 162852 162852 1 ILLTEPPMNPTK Unmodified 1352.7374 0.7373733 1836 P61160 ACTR2 Actin-related protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71.501 70.488 2 2.6445E-27 90795 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 185.29 173.07 3348100000 68697000 2850400000 32869000 18904000 18695000 29170000 20041000 29699000 18178000 29183000 41648000 45061000 25058000 33186000 87359000 24224 1836 22142 203899;203900;203901;203902;203903;203904;203905;203906;203907;203908;203909;203910;203911;203912;203913 162853;162854;162855;162856;162857;162858;162859;162860;162861;162862;162863;162864;162865;162866;162867;162868;162869;162870 162859 18 ILLTEPPMNPTK Oxidation (M) 1368.7323 0.73228792 1836 P61160 ACTR2 Actin-related protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.1 3.91 4 1 5 1 3 1 1 1 1 1 1 59.443 57.348 2 4.243E-19 70912 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 159.79 151.05 304120000 40006000 70837000 23347000 0 19235000 44605000 0 18142000 0 45457000 0 0 42487000 0 0 24225 1836 22142 203914;203915;203916;203917;203918;203919;203920;203921;203922;203923 162871;162872;162873;162874;162875;162876;162877;162878 162878 2977 8 ILLTNIR Unmodified 841.53854 0.53853756 2230 Q13057 COASY Bifunctional coenzyme A synthase;Phosphopantetheine adenylyltransferase;Dephospho-CoA kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.745 58.859 2 0.040914 66967 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 113.08 19.49 229490000 0 0 0 12190000 12631000 22902000 17134000 17111000 7455900 23713000 23819000 19611000 15221000 22952000 34749000 24226 2230 22143 203924;203925;203926;203927;203928;203929;203930;203931;203932;203933;203934;203935 162879 162879 0 ILLTQENPFFR Unmodified 1376.7452 0.74523587 2168 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 86.072 86.139 2 2.0046E-05 99329 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 152.47 139.51 187040000 0 0 0 4012200 6603900 20322000 8423000 9620000 9750400 22451000 15797000 21220000 11793000 13392000 43651000 24227 2168 22144 203936;203937;203938;203939;203940;203941;203942;203943;203944;203945;203946;203947 162880;162881;162882;162883;162884;162885;162886;162887;162888;162889;162890;162891;162892 162884 13 ILLTQENPFFRK Unmodified 1504.8402 0.84019889 2168 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.504 78.562 3 1.8516E-29 90234 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 145.55 125.13 251520000 0 0 0 10306000 4546100 28695000 8796800 14228000 14327000 18518000 10702000 21854000 12516000 15428000 91599000 24228 2168 22145 203948;203949;203950;203951;203952;203953;203954;203955;203956;203957;203958;203959 162893;162894;162895;162896;162897;162898;162899;162900;162901;162902;162903;162904 162896 12 ILLVDSPGMGNADDEQQEEGTSSK Unmodified 2519.1333 0.13334154 4973 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 69.531 69.253 3 2.3055E-11 79007 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.11 63.306 58756000 0 3931800 0 3190900 3114200 4478400 2473700 3134800 3350700 4795000 5533200 6882100 3521600 4080600 10269000 24229 4973 22146 203960;203961;203962;203963;203964;203965;203966;203967;203968;203969;203970;203971;203972 162905;162906;162907;162908;162909;162910;162911;162912;162913;162914;162915;162916;162917;162918;162919;162920;162921 162909 17 ILLVDSPGMGNADDEQQEEGTSSK Oxidation (M) 2535.1283 0.12825616 4973 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 yes yes 0 1 0 By MS/MS By matching By matching By matching By matching By MS/MS By matching 8.12 3.26 1 1 6 2 1 1 1 1 1 1 59.904 58.52 2;3 1.0484E-31 72967 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.36 108.47 54949000 0 39068000 0 2115100 1892400 1727100 0 0 0 0 3429900 0 4128100 2589300 0 24230 4973 22146 203973;203974;203975;203976;203977;203978;203979;203980 162922;162923;162924 162922 6321 3 ILLWDTR Unmodified 915.5178 0.51780212 4092 Q9BQA1 WDR77 Methylosome protein 50 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.578 75.64 2 0.025177 86500 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.297 46.404 121170000 0 0 0 6670500 4456400 7668200 6011200 6719700 5446100 6519000 12534000 13980000 9081200 11651000 30433000 24231 4092 22147 203981;203982;203983;203984;203985;203986;203987;203988;203989;203990;203991;203992 162925 162925 1 ILMAINGK Oxidation (M) 874.49462 0.49462383 135 O00264 PGRMC1 Membrane-associated progesterone receptor component 1 yes yes 0 1 0 By MS/MS By matching 10 0 2 1 1 32.499 32.285 2 0.040844 35403 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 43.814 18.257 6074100 0 0 0 0 3624900 2449200 0 0 0 0 0 0 0 0 0 24232 135 22148 203993;203994 162926 162926 1 ILMDKPEMNVVLK Oxidation (M) 1544.8306 0.83062176 1771 P55786 NPEPPS Puromycin-sensitive aminopeptidase yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2.22 0.416 7 2 3 3 3 67.962 62.301 2;3 0.0005662 84998 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.417 65.212 386100000 198330000 126220000 61551000 0 0 0 0 0 0 0 0 0 0 0 0 24233 1771 22149 203995;203996;203997;203998;203999;204000;204001;204002;204003 162927;162928;162929;162930;162931;162932;162933;162934 162927 2889;2890 4 ILMDKPEMNVVLK Unmodified 1528.8357 0.83570714 1771 P55786 NPEPPS Puromycin-sensitive aminopeptidase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 78.996 73.811 3 0.0018093 94774 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.558 50.008 464670000 284620000 153610000 26444000 0 0 0 0 0 0 0 0 0 0 0 0 24234 1771 22149 204004;204005;204006 162935;162936 162936 1 ILMDKPEMNVVLK 2 Oxidation (M) 1560.8255 0.82553638 1771 P55786 NPEPPS Puromycin-sensitive aminopeptidase yes yes 0 2 1 By MS/MS By MS/MS 2 0 2 1 1 54.191 48.156 3 0.0035256 60453 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 56.205 36.527 145180000 57014000 0 88162000 0 0 0 0 0 0 0 0 0 0 0 0 24235 1771 22149 204007;204008 162937;162938 162938 2889;2890 1 ILMDSPEDADLFHSEEIK Oxidation (M) 2103.9671 0.96705148 5185 Q9Y478 PRKAB1 5'-AMP-activated protein kinase subunit beta-1 yes yes 0 1 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 78.882 73.453 3 2.438E-14 92809 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.42 106.99 99994000 17671000 82323000 0 0 0 0 0 0 0 0 0 0 0 0 0 24236 5185 22150 204009;204010;204011 162939;162940;162941 162939 6554 3 ILMDSPEDADLFHSEEIK Unmodified 2087.9721 0.97213685 5185 Q9Y478 PRKAB1 5'-AMP-activated protein kinase subunit beta-1 yes yes 0 0 0 By MS/MS 2 0 1 1 84.717 79.973 3 1.0859E-47 99415 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.75 104.51 83264000 0 83264000 0 0 0 0 0 0 0 0 0 0 0 0 0 24237 5185 22150 204012 162942 162942 1 ILMEFNK Oxidation (M) 909.46299 0.46298935 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 38.858 38.202 2 0.032955 41822 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 63.148 31.844 156510000 0 101180000 0 0 4718200 9916200 8109600 0 5733100 0 12156000 0 14696000 0 0 24238 5071 22151 204013;204014;204015;204016;204017;204018;204019 162943;162944;162945 162944 3 ILMEFNK Unmodified 893.46807 0.46807473 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 63.178 57.189 2 0.02222 73506 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.74 45.747 261230000 153620000 73293000 34324000 0 0 0 0 0 0 0 0 0 0 0 0 24239 5071 22151 204020;204021;204022 162946;162947 162946 2 ILMELDGPNWR Oxidation (M) 1358.6653 0.66527099 2137 Q07617 SPAG1 Sperm-associated antigen 1 yes yes 0 1 0 By MS/MS 10 0 1 1 40.539 40.703 2 0.047387 45368 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 45.68 26.586 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24240 2137 22152 204023 162948 162948 1 ILMEVEK Oxidation (M) 876.46266 0.462655 4557 Q9NQ29 LUC7L Putative RNA-binding protein Luc7-like 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 25.363 25.637 2 0.015744 27781 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 94.262 19.847 166940000 0 0 0 0 18624000 18206000 0 14099000 0 22845000 21658000 18865000 25836000 11633000 15173000 24241 4557 22153 204024;204025;204026;204027;204028;204029;204030;204031;204032 162949;162950;162951;162952 162952 5971 4 ILMEVEK Unmodified 860.46774 0.46774038 4557 Q9NQ29 LUC7L Putative RNA-binding protein Luc7-like 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 42.828 42.946 2 0.025588 48082 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 80.462 14.79 157200000 0 0 0 12875000 12076000 12237000 9663300 0 10714000 14191000 18929000 0 19762000 20539000 26217000 24242 4557 22153 204033;204034;204035;204036;204037;204038;204039;204040;204041;204042 162953;162954;162955;162956 162953 4 ILMGNEELTR Oxidation (M) 1190.5965 0.59652272 3839 Q96FV9 THOC1 THO complex subunit 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 2 2 2 2 2 2 1 2 2 1 1 38.95 39.076 2 0.0016929 43029 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 82.287 52.814 156120000 0 0 0 11132000 11213000 12779000 13602000 5313000 12372000 11317000 24395000 29417000 0 8799400 15777000 24243 3839 22154 204043;204044;204045;204046;204047;204048;204049;204050;204051;204052;204053;204054;204055;204056;204057;204058;204059;204060;204061 162957;162958;162959;162960;162961;162962;162963;162964;162965;162966;162967;162968;162969 162964 5357 11 ILMGNEELTR Unmodified 1174.6016 0.6016081 3839 Q96FV9 THOC1 THO complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 53.218 53.241 2 0.0057966 60015 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 67.507 27.239 146100000 0 0 0 17402000 0 20015000 16388000 19832000 0 0 0 0 33996000 38464000 0 24244 3839 22154 204062;204063;204064;204065;204066;204067;204068 162970;162971;162972;162973;162974;162975;162976;162977 162975 8 ILMLGLDAAGK Oxidation (M) 1116.6213 0.62128091 1897 P62330 ARF6 ADP-ribosylation factor 6 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 71.768 71.827 2 0.00020285 82754 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 94.692 59.884 126060000 0 0 0 6796900 10102000 11241000 10257000 0 5776800 19261000 15810000 11491000 9694200 10182000 15448000 24245 1897 22155 204069;204070;204071;204072;204073;204074;204075;204076;204077;204078;204079 162978;162979;162980;162981;162982;162983;162984;162985;162986;162987;162988 162979 3070 8 ILMLGLDAAGK Unmodified 1100.6264 0.62636629 1897 P62330 ARF6 ADP-ribosylation factor 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 80.022 79.452 2 0.0019298 92139 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 70.056 43.454 140390000 6201000 0 0 3973900 5944600 7557800 5371300 12216000 5981600 12936000 12637000 11333000 8268200 13884000 34085000 24246 1897 22155 204080;204081;204082;204083;204084;204085;204086;204087;204088;204089;204090;204091;204092 162989;162990;162991;162992;162993;162994;162995;162996 162989 8 ILMVGLDAAGK Oxidation (M) 1102.6056 0.60563084 2011;1071;2012 P84077;P61204;P18085;P84085 ARF1;ARF3;ARF4;ARF5 ADP-ribosylation factor 1;ADP-ribosylation factor 3;ADP-ribosylation factor 4;ADP-ribosylation factor 5 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.9 3.81 6 2 12 3 3 2 1 1 1 1 1 1 1 1 1 1 1 1 62.307 60.991 2 0.00013507 69436 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 107.15 83.725 2477800000 51756000 578230000 41157000 108000000 104390000 109920000 124560000 236190000 71874000 211150000 200460000 143350000 135530000 130490000 230740000 24247 2011;1071;2012 22156 204093;204094;204095;204096;204097;204098;204099;204100;204101;204102;204103;204104;204105;204106;204107;204108;204109;204110;204111;204112 162997;162998;162999;163000;163001;163002;163003;163004;163005;163006;163007;163008;163009;163010;163011;163012;163013;163014;163015;163016;163017;163018;163019;163020;163021;163022;163023;163024;163025;163026;163027;163028;163029;163030 163001 1520;3262 34 ILMVGLDAAGK Unmodified 1086.6107 0.61071622 2011;1071;2012 P84077;P61204;P18085;P84085 ARF1;ARF3;ARF4;ARF5 ADP-ribosylation factor 1;ADP-ribosylation factor 3;ADP-ribosylation factor 4;ADP-ribosylation factor 5 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.18 3.29 3 1 13 1 2 1 1 1 1 1 1 1 1 1 1 1 1 2 73.909 72.851 2 0.00026373 84088 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 91.867 52.324 2095900000 120020000 246630000 36730000 60413000 76271000 125840000 88714000 123950000 71050000 173300000 186090000 152800000 85033000 133170000 415870000 24248 2011;1071;2012 22156 204113;204114;204115;204116;204117;204118;204119;204120;204121;204122;204123;204124;204125;204126;204127;204128;204129 163031;163032;163033;163034;163035;163036;163037;163038;163039;163040;163041;163042;163043;163044;163045;163046;163047;163048;163049;163050;163051;163052 163049 22 ILNDDTALK Unmodified 1001.5393 0.53932542 1746 P54727 RAD23B UV excision repair protein RAD23 homolog B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.45 3.89 4 1 6 4 1 1 1 1 1 1 1 38.949 37.436 2 0.0035244 40694 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 107.9 31.861 3177200000 0 2538500000 54987000 20063000 0 19643000 0 0 0 0 96853000 154970000 0 140700000 151520000 24249 1746 22157 204130;204131;204132;204133;204134;204135;204136;204137;204138;204139;204140 163053;163054;163055;163056;163057;163058;163059;163060;163061;163062 163060 7 ILNDLSSDAPGVPRIEEEK Unmodified 2081.0641 0.064063405 1034 P16220 CREB1 Cyclic AMP-responsive element-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 5.57 3.85 3 1 3 1 2 1 1 1 1 75.233 72.607 3 3.1797E-13 91169 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.637 62.296 156240000 14989000 96187000 26212000 0 0 0 0 0 0 0 5111800 0 0 5297800 8438100 24250 1034 22158 204141;204142;204143;204144;204145;204146;204147 163063;163064;163065;163066;163067;163068;163069;163070 163063 8 ILNDVQDR Unmodified 971.50361 0.50360861 2347;118 O00148;Q13838 DDX39A;DDX39B ATP-dependent RNA helicase DDX39A;Spliceosome RNA helicase DDX39B no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 25.488 25.744 2 0.0068017 27729 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 96.253 74.725 78989000 0 0 0 0 0 31940000 18008000 0 0 0 0 13593000 0 15449000 0 24251 118;2347 22159 204148;204149;204150;204151;204152;204153 163071;163072;163073;163074;163075;163076;163077;163078;163079;163080 163073 9 ILNDVQDRFEVNISELPDEIDISSYIEQTR Unmodified 3549.7475 0.74748688 2347 Q13838 DDX39B Spliceosome RNA helicase DDX39B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.5 0.5 2 2 2 1 1 98.154 93.802 3 2.2893E-06 116986 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.579 33.431 73237000 65579000 4583200 3075000 0 0 0 0 0 0 0 0 0 0 0 0 24252 2347 22160 204154;204155;204156;204157 163081;163082;163083;163084 163083 4 ILNDVQDRFEVNVAELPEEIDISTYIEQSR Unmodified 3533.7526 0.75257226 118 O00148 DDX39A ATP-dependent RNA helicase DDX39A yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 98.389 92.567 3 6.999E-78 116921 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 123.31 117.86 53114000 53114000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24253 118 22161 204158;204159 163085;163086 163086 2 ILNEKPTTDEPEK Unmodified 1512.7672 0.7671531 4365 Q9H2G2 SLK STE20-like serine/threonine-protein kinase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.71 5 11 2 2 1 1 1 1 1 1 1 1 1 1 1 1 26.814 25.486 2;3 3.0913E-09 33191 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.34 114.65 633970000 101030000 242310000 8549600 18866000 12790000 25021000 20099000 29260000 12151000 27702000 32884000 29311000 0 24281000 49717000 24254 4365 22162 204160;204161;204162;204163;204164;204165;204166;204167;204168;204169;204170;204171;204172;204173;204174;204175 163087;163088;163089;163090;163091;163092;163093;163094;163095 163090 9 ILNELSSDVPGVPK Unmodified 1466.7981 0.7980593 2088 Q03060 CREM cAMP-responsive element modulator yes yes 0 0 0 By MS/MS 2 0 1 1 79.917 75.205 2 3.3388E-09 93669 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 132.17 110.71 42390000 0 42390000 0 0 0 0 0 0 0 0 0 0 0 0 0 24255 2088 22163 204176 163096 163096 1 ILNEMRDQYEK Oxidation (M) 1453.6871 0.68712864 56;84 CON__P02533;P02533;CON__Q04695;Q04695 KRT14;KRT17 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 17 no no 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 16 2 2 2 2 1 2 1 1 1 2 22.111 22.195 2;3 6.8239E-15 22999 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 163.84 133.27 + 2380700000 0 0 0 954100000 208010000 241820000 326590000 67132000 239190000 48172000 0 4670200 124480000 166530000 0 24256 56;84 22164 204177;204178;204179;204180;204181;204182;204183;204184;204185;204186;204187;204188;204189;204190;204191;204192 163097;163098;163099;163100;163101;163102;163103;163104;163105;163106;163107;163108;163109;163110;163111 163107 57 9 ILNEMRDQYEK Unmodified 1437.6922 0.69221402 56;84 CON__P02533;P02533;CON__Q04695;Q04695 KRT14;KRT17 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 17 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 37.463 37.644 2;3 6.2021E-47 41483 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 190.86 137.08 + 8728400000 0 0 0 1347800000 292870000 499120000 261930000 1272200000 273150000 661010000 681690000 952900000 1872000000 320600000 293090000 24257 56;84 22164 204193;204194;204195;204196;204197;204198;204199;204200;204201;204202;204203;204204;204205;204206;204207;204208;204209;204210;204211;204212;204213;204214;204215;204216 163112;163113;163114;163115;163116;163117;163118;163119;163120;163121;163122;163123;163124;163125;163126;163127;163128;163129;163130 163122 18 ILNEMRDQYEQMAEK Oxidation (M) 1912.8659 0.86589764 70 CON__P08779;P08779;CON__Q9Z2K1;CON__Q3ZAW8 KRT16 Keratin, type I cytoskeletal 16 yes no 0 1 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 23 3 1 1 2 4 1 2 2 1 3 2 1 45.359 45.493 2;3 1.5474E-17 48210 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 105.65 85.442 + 608630000 0 0 0 95378000 8063800 2984200 4298800 94851000 11606000 33871000 29674000 7924500 284980000 26135000 8867700 24258 70 22165 204217;204218;204219;204220;204221;204222;204223;204224;204225;204226;204227;204228;204229;204230;204231;204232;204233;204234;204235;204236;204237;204238;204239 163131;163132;163133;163134;163135;163136;163137;163138;163139 163134 85;87 8 ILNEMRDQYEQMAEK Unmodified 1896.871 0.87098302 70 CON__P08779;P08779;CON__Q9Z2K1;CON__Q3ZAW8 KRT16 Keratin, type I cytoskeletal 16 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 2 1 2 1 1 60.433 60.554 2;3 0.00084858 68766 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 51.546 41.207 + 110050000 0 0 0 4378600 0 0 0 21846000 0 6461000 0 0 60819000 7602400 8946300 24259 70 22165 204240;204241;204242;204243;204244;204245;204246;204247 163140;163141;163142;163143;163144;163145;163146 163142 6 ILNEMRDQYEQMAEK 2 Oxidation (M) 1928.8608 0.86081227 70 CON__P08779;P08779;CON__Q9Z2K1;CON__Q3ZAW8 KRT16 Keratin, type I cytoskeletal 16 yes no 0 2 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 2 1 2 1 1 2 2 2 30.815 30.991 2;3 0.00059149 33598 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 55.724 50.722 + 354740000 0 0 0 84457000 15828000 0 56921000 1674700 13894000 0 22794000 0 148980000 0 10190000 24260 70 22165 204248;204249;204250;204251;204252;204253;204254;204255;204256;204257;204258;204259;204260 163147;163148;163149;163150;163151;163152 163150 85;87 6 ILNEPLK Unmodified 825.496 0.49600404 5143 Q9Y399 MRPS2 28S ribosomal protein S2, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 37.769 37.895 2 0.023412 40306 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.512 26.871 61239000 0 0 0 5344400 5247700 5979500 4041300 0 0 6850000 6065900 0 7769700 9584400 10356000 24261 5143 22166 204261;204262;204263;204264;204265;204266;204267;204268;204269 163153 163153 1 ILNEQAAK Unmodified 885.49198 0.4919813 1106 P20585 MSH3 DNA mismatch repair protein Msh3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 14.776 14.981 2 0.011784 13523 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 76.134 30.182 47989000 0 0 0 0 0 0 6475700 5598200 5139800 0 0 0 10084000 11084000 9607000 24262 1106 22167 204270;204271;204272;204273;204274;204275 163154;163155 163155 2 ILNGQEQR Unmodified 956.50394 0.50394297 28 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.777 11.952 2 0.014173 10915 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 70.912 49.612 44165000 0 0 0 0 2561300 5574000 3075400 3233100 2496400 3926400 1890300 5926000 3389200 4249900 7842700 24263 28 22168 204276;204277;204278;204279;204280;204281;204282;204283;204284;204285;204286 163156;163157;163158;163159 163158 4 ILNHSVDK Unmodified 924.50288 0.50288033 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.167 11.307 2 0.009506 10179 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 82.671 0 83556000 0 0 0 7548200 3464100 6182400 6454400 4787400 4156200 0 4194800 10358000 10079000 6565700 19766000 24264 2451 22169 204287;204288;204289;204290;204291;204292;204293;204294;204295;204296;204297 163160;163161;163162 163160 3 ILNIFGVIK Unmodified 1015.643 0.64300263 762 P02786 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 90.886 90.984 2 0.0054582 105359 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.674 60.309 18629000 0 0 0 580030 0 2178000 1272500 1446800 1965000 2476500 1616300 2130100 0 904020 4059200 24265 762 22170 204298;204299;204300;204301;204302;204303;204304;204305;204306;204307 163163;163164;163165;163166;163167;163168;163169 163165 7 ILNLLSPSDGER Unmodified 1312.6987 0.69867961 5245 Q9Y5Q9 GTF3C3 General transcription factor 3C polypeptide 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.287 74.35 2 0.0016435 85539 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 66.19 30.895 119880000 0 0 0 8642700 8190000 6511300 8744600 10428000 5803500 10028000 13037000 13024000 12118000 9365800 13991000 24266 5245 22171 204308;204309;204310;204311;204312;204313;204314;204315;204316;204317;204318;204319 163170;163171;163172;163173;163174;163175;163176;163177;163178;163179;163180 163178 10 ILNLRVFEDESGK Unmodified 1518.8042 0.80420731 3514 Q8TEA8 DTD1 D-tyrosyl-tRNA(Tyr) deacylase 1 yes yes 0 0 1 By MS/MS 2 0 1 1 83.831 75.701 3 0.041744 99011 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 22.55 10.937 8964900 8964900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24267 3514 22172 204320 163181 163181 1 ILNLSGNELK Unmodified 1099.6237 0.62372375 4861 Q9UBU9 NXF1 Nuclear RNA export factor 1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.364 61.466 2 0.0029455 69770 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 78.516 29.158 97158000 0 0 0 6603700 7142400 9400000 7879000 5986700 5989700 11617000 8306300 10307000 6081400 6087200 11758000 24268 4861 22173 204321;204322;204323;204324;204325;204326;204327;204328;204329;204330;204331;204332 163182;163183;163184;163185;163186;163187;163188;163189 163188 7 ILNNSGLPITSAIDLEDAAK Unmodified 2054.0895 0.089549874 3875 Q96I99 SUCLG2 Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 93.511 88.615 2 3.494E-91 109962 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 160.47 144.34 89154000 0 89154000 0 0 0 0 0 0 0 0 0 0 0 0 0 24269 3875 22174 204333 163190;163191 163191 2 ILNPEEIEK Unmodified 1083.5812 0.58119023 219 O14818 PSMA7 Proteasome subunit alpha type-7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.65 3.66 1 3 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 53.545 52.23 2 0.00043088 66621 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 132.76 63.375 9461800000 206020000 8114600000 92182000 81739000 33705000 29721000 41345000 44773000 23129000 45198000 163070000 142030000 43009000 100540000 300750000 24270 219 22175 204334;204335;204336;204337;204338;204339;204340;204341;204342;204343;204344;204345;204346;204347;204348;204349;204350 163192;163193;163194;163195;163196;163197;163198;163199;163200;163201;163202;163203;163204;163205;163206;163207;163208;163209 163195 17 ILNPLLDR Unmodified 952.57057 0.57056597 5182 Q9Y446 PKP3 Plakophilin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.912 71.981 2 0.0075833 82669 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 89.142 35.588 157300000 0 0 0 14600000 8581300 13032000 10796000 16803000 6584100 13840000 12294000 17319000 12744000 12348000 18363000 24271 5182 22176 204351;204352;204353;204354;204355;204356;204357;204358;204359;204360;204361;204362 163210;163211;163212;163213;163214;163215;163216;163217;163218;163219;163220 163211 11 ILNSLTLPNK Unmodified 1111.6601 0.66010926 2966 Q6R327 RICTOR Rapamycin-insensitive companion of mTOR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 65.61 65.744 2 0.0351 75558 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 69.812 32.653 36380000 0 0 0 1967600 0 4951400 2916300 2875600 3566400 3412000 4902400 5852400 2655800 0 3280400 24272 2966 22177 204363;204364;204365;204366;204367;204368;204369;204370;204371;204372 163221;163222;163223;163224 163221 0 ILNSQSSK Unmodified 875.47125 0.47124585 2443 Q14746 COG2 Conserved oligomeric Golgi complex subunit 2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 7.9375 4.6345 2 0.014055 6935 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.492 46.372 48721000 0 48721000 0 0 0 0 0 0 0 0 0 0 0 0 0 24273 2443 22178 204373;204374 163225 163225 1 ILNSYTPIDDFEK Unmodified 1553.7613 0.76133944 4580 Q9NQX4 MYO5C Unconventional myosin-Vc yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.206 77.267 2 3.6095E-08 88832 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 105.86 68.388 97596000 0 0 0 4312900 6529500 8966800 7739600 6591800 6437500 10981000 8527500 12910000 4346800 8707600 11544000 24274 4580 22179 204375;204376;204377;204378;204379;204380;204381;204382;204383;204384;204385;204386 163226;163227;163228;163229;163230;163231;163232;163233;163234 163229 9 ILNVDEFVK Unmodified 1075.5914 0.59136099 4668 Q9NVH2 INTS7 Integrator complex subunit 7 yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching 10 0 13 1 1 1 1 2 1 1 2 2 1 76.017 76.094 2 0.0031541 90038 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 92.439 46.721 116820000 0 0 0 7553700 7010100 10225000 9084800 11614000 2258800 11982000 0 31509000 11889000 13696000 0 24275 4668 22180 204387;204388;204389;204390;204391;204392;204393;204394;204395;204396;204397;204398;204399 163235;163236;163237;163238 163236 4 ILNVDNMK Oxidation (M) 961.49027 0.49026674 3485 Q8TC07 TBC1D15 TBC1 domain family member 15 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 26.086 26.478 2 0.0074326 27698 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 77.282 28.779 70849000 0 0 0 0 0 0 13631000 0 0 12338000 12612000 12819000 10248000 0 9200900 24276 3485 22181 204400;204401;204402;204403;204404;204405;204406;204407;204408;204409;204410 163239;163240;163241;163242;163243;163244;163245;163246;163247;163248 163246 5008 10 ILNVGDIGGNETVTLR Unmodified 1669.8999 0.89989861 1146 P22735 TGM1 Protein-glutamine gamma-glutamyltransferase K yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.531 79.574 2 1.4815E-27 92116 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 132.79 110.26 93533000 0 0 0 10357000 8438300 5386800 4382600 14130000 4785800 17001000 7586300 11729000 5829100 3907100 0 24277 1146 22182 204411;204412;204413;204414;204415;204416;204417;204418;204419;204420;204421 163249;163250;163251;163252;163253;163254;163255;163256 163256 4 ILNVSNK Unmodified 786.45995 0.45995289 4393 Q9H4A3 WNK1 Serine/threonine-protein kinase WNK1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 21.424 21.641 2 0.018259 21305 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 118.69 50.653 331720000 0 0 0 6619400 0 39209000 31390000 39250000 0 44457000 45576000 0 65722000 50270000 9222800 24278 4393 22183 204422;204423;204424;204425;204426;204427;204428;204429;204430 163257;163258;163259;163260;163261 163261 3 ILNVVGMR Unmodified 900.52151 0.52150728 4679 Q9NVR2 INTS10 Integrator complex subunit 10 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 60.113 60.281 2 0.0068885 67761 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 92.191 29.852 15528000 0 0 0 0 1333500 0 0 1584500 0 0 3204400 0 2407800 2568500 4429700 24279 4679 22184 204431;204432;204433;204434;204435;204436 163262;163263;163264;163265 163262 4 ILPAAALASEHSK Unmodified 1306.7245 0.72450043 3111 Q7Z6E9 RBBP6 E3 ubiquitin-protein ligase RBBP6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 51.96 50.244 2;3 0.00036153 55773 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 65.805 51.841 450060000 136230000 45659000 19402000 18709000 17263000 15121000 18460000 15346000 18285000 23330000 23610000 22901000 25219000 22102000 28430000 24280 3111 22185 204437;204438;204439;204440;204441;204442;204443;204444;204445;204446;204447;204448;204449;204450;204451;204452;204453 163266;163267;163268;163269;163270;163271;163272;163273;163274;163275;163276;163277;163278;163279;163280;163281;163282;163283;163284;163285;163286;163287;163288;163289 163268 23 ILPAPQFGAQK Unmodified 1168.6604 0.66044361 4426 Q9H6U6 BCAS3 Breast carcinoma-amplified sequence 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.245 59.355 2 0.014839 67696 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 60.478 37.049 119540000 0 0 0 7802700 7276900 9007700 8296800 7796700 7017800 11744000 11448000 12037000 12372000 8721600 16022000 24281 4426 22186 204454;204455;204456;204457;204458;204459;204460;204461;204462;204463;204464;204465 163290;163291;163292;163293;163294 163290 3 ILPCGHINDLVK Unmodified 1377.7439 0.74385566 5394 yes yes 0 0 0 By MS/MS 2 0 1 1 95.979 87.848 3 0.0039523 113501 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.706 4.3701 + 17198000 17198000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24282 5394 22187 204466 163295 163295 1 ILPDGEDFLAVQTSQGVPVRR Unmodified 2296.2175 0.21754435 276 O15357 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 80.924 81.011 3 3.7529E-06 93613 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 59.512 55.35 66753000 0 0 0 0 1589000 10813000 3449000 7889600 7535000 0 0 0 4310900 6707400 24459000 24283 276 22188 204467;204468;204469;204470;204471;204472;204473;204474 163296;163297;163298;163299;163300;163301;163302;163303 163296 7 ILPDILK Unmodified 810.52149 0.52149051 910 P0DN79;P35520 CBS Cystathionine beta-synthase yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74.361 73.376 2 0.029674 92659 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.407 29.631 1057500000 5904600 706240000 6993500 15384000 10959000 50854000 16655000 14336000 13479000 35460000 40424000 32050000 16368000 30087000 62292000 24284 910 22189 204475;204476;204477;204478;204479;204480;204481;204482;204483;204484;204485;204486;204487;204488;204489 163304;163305;163306 163304 3 ILPDLLAQYDSSK Unmodified 1461.7715 0.7715102 4284 Q9C0B7 TANGO6 Transport and Golgi organization protein 6 homolog yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 83.312 83.351 2 0.0001279 96574 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 84.507 65.727 45993000 0 0 0 1389800 2594100 4754800 2885600 3197700 0 10870000 5680200 6643800 3739900 4236900 0 24285 4284 22190 204490;204491;204492;204493;204494;204495;204496;204497;204498;204499;204500 163307;163308;163309;163310;163311;163312;163313;163314;163315 163308 9 ILPDQFSPLNEVLK Unmodified 1611.8872 0.88720866 5186 Q9Y485 DMXL1 DmX-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 90.734 90.861 2 0.0010704 105236 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.353 35.968 3798900 0 0 0 0 0 0 0 0 0 1731100 0 0 0 0 2067900 24286 5186 22191 204501;204502 163316;163317 163317 2 ILPDSGGVAK Unmodified 955.53385 0.53384611 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.886 31.075 2 0.0095404 34330 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 57.59 44.011 392140000 0 0 0 24260000 24638000 31393000 28030000 28212000 28730000 27913000 34437000 49360000 39545000 38205000 37414000 24287 19 22192 204503;204504;204505;204506;204507;204508;204509;204510;204511;204512;204513;204514 163318;163319;163320;163321;163322;163323 163318 4 ILPEAHQR Unmodified 962.52976 0.52976379 1210 P26640 VARS Valine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 14.614 14.771 2 0.0070301 13465 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.041 38.742 233320000 0 0 0 10501000 6867400 23541000 11554000 9759000 8856600 30245000 28117000 30226000 0 24721000 48933000 24288 1210 22193 204515;204516;204517;204518;204519;204520;204521;204522;204523;204524;204525 163324;163325;163326;163327;163328;163329;163330 163326 7 ILPEEITNLR Unmodified 1196.6765 0.6764876 4468 Q9H9A6 LRRC40 Leucine-rich repeat-containing protein 40 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.113 74.174 2 0.0016798 85348 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 103.56 90.109 873580000 0 0 0 48312000 56344000 77321000 66775000 68850000 69057000 94145000 82031000 98451000 58536000 62045000 91713000 24289 4468 22194 204526;204527;204528;204529;204530;204531;204532;204533;204534;204535;204536;204537 163331;163332;163333;163334;163335;163336;163337;163338;163339;163340;163341;163342 163332 12 ILPEEITNLRNLK Unmodified 1551.8984 0.89844205 4468 Q9H9A6 LRRC40 Leucine-rich repeat-containing protein 40 yes yes 0 0 1 By MS/MS 2 0 1 1 83.698 75.568 3 0.010699 98780 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.46 37.341 20540000 20540000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24290 4468 22195 204538 163343 163343 1 ILPEQGLMLTGSADK Oxidation (M) 1587.8178 0.81780846 5085 Q9Y263 PLAA Phospholipase A-2-activating protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 6.57 3.96 3 4 1 1 1 1 1 1 1 71.48 69.087 2 1.0119E-30 88978 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 130.56 103.26 448070000 13040000 414810000 10124000 955960 0 2673000 0 0 0 3163200 0 0 0 3305900 0 24291 5085 22196 204539;204540;204541;204542;204543;204544;204545 163344;163345;163346;163347;163348;163349 163347 6473 6 ILPEQGLMLTGSADK Unmodified 1571.8229 0.82289384 5085 Q9Y263 PLAA Phospholipase A-2-activating protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.57 3.85 3 1 3 1 2 1 1 1 1 78.384 75.774 2 1.2843E-30 94417 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 153.74 128.12 1504100000 15899000 1463600000 6137100 0 0 0 0 4068700 0 3701600 0 0 0 0 10692000 24292 5085 22196 204546;204547;204548;204549;204550;204551;204552 163350;163351;163352;163353;163354;163355;163356;163357 163352 8 ILPESFFK Unmodified 979.53787 0.53786886 4309 Q9GZV5 WWTR1 WW domain-containing transcription regulator protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 3 9 1 1 1 1 1 1 1 1 1 1 1 1 79.996 78.803 2 0.010495 90449 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.469 56.846 203650000 62043000 32081000 20396000 0 4355300 0 7778000 7724000 6686900 0 11120000 9484200 8409700 10435000 23140000 24293 4309 22197 204553;204554;204555;204556;204557;204558;204559;204560;204561;204562;204563;204564 163358;163359;163360;163361;163362;163363 163359 6 ILPFQYVLCAATSPAVK Unmodified 1877.0121 0.012091596 2192 Q12800 TFCP2 Alpha-globin transcription factor CP2 yes yes 0 0 0 By MS/MS 10 0 1 1 97.31 97.473 2 0.00019188 113149 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.44 54.283 2441700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2441700 24294 2192 22198 204565 163364 163364 1 ILPGNMK Unmodified 771.4313 0.43129529 1578 P49588 AARS Alanine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 34.299 29.507 2 0.023181 41182 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 105.42 70.714 2066600000 718130000 1308400000 40004000 0 0 0 0 0 0 0 0 0 0 0 0 24295 1578 22199 204566;204567;204568 163365;163366 163366 2 ILPGPHFEER Unmodified 1193.6193 0.61930707 3742 Q96AX1 VPS33A Vacuolar protein sorting-associated protein 33A yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 48.146 48.259 3 0.0072917 53208 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.198 23.585 31277000 0 0 0 2027900 0 6961100 3181400 0 1804900 5491500 0 0 0 5016100 6793900 24296 3742 22200 204569;204570;204571;204572;204573;204574;204575 163367;163368;163369 163368 2 ILPGSMIVSSDDTVDSTIDR Oxidation (M) 2136.0256 0.025628988 4954 Q9UK59 DBR1 Lariat debranching enzyme yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 75.101 75.127 2 4.8733E-11 86733 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 78.486 65.506 44424000 0 0 0 3276000 3702500 4513500 4259300 3930500 2880100 6690200 5575900 5953800 3641700 0 0 24297 4954 22201 204576;204577;204578;204579;204580;204581;204582;204583;204584;204585 163370;163371;163372;163373;163374;163375;163376 163371 6301 7 ILPMAGRDPECQR Unmodified 1541.7443 0.74426637 3560 Q8WVC0 LEO1 RNA polymerase-associated protein LEO1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 39.943 40.195 3 0.0010354 44665 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 49.423 33.286 141270000 0 0 0 0 6228500 7633300 9261800 8683700 0 12702000 15098000 25674000 18817000 18096000 19076000 24298 3560 22202 204586;204587;204588;204589;204590;204591;204592;204593;204594;204595;204596 163377;163378;163379;163380;163381;163382;163383;163384;163385;163386;163387;163388;163389;163390 163383 14 ILPPPSPWPK Unmodified 1130.6488 0.64881629 4949 Q9UJY4 GGA2 ADP-ribosylation factor-binding protein GGA2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.923 71.991 2 0.01329 82661 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 51.346 33.96 71365000 0 0 0 3974300 4750400 6009800 5484000 5369700 3729700 6319200 6750900 6962300 6289300 5557900 10168000 24299 4949 22203 204597;204598;204599;204600;204601;204602;204603;204604;204605;204606;204607;204608 163391;163392;163393;163394;163395;163396;163397;163398;163399;163400 163395 10 ILPRNQCEGIK Unmodified 1326.7078 0.70780451 237 O14980 XPO1 Exportin-1 yes yes 0 0 1 By MS/MS 2 0 2 2 33.634 27.5 2;3 0.0028919 38516 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.555 30.84 179690000 179690000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24300 237 22204 204609;204610 163401;163402;163403;163404 163402 4 ILPSLEDTLSLVK Unmodified 1426.8283 0.8282968 4721 Q9NX74 DUS2 tRNA-dihydrouridine(20) synthase [NAD(P)+]-like yes yes 0 0 0 By MS/MS 10 0 1 1 91.655 91.793 2 0.01348 106388 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.399 21.623 1400600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1400600 24301 4721 22205 204611 163405 163405 1 ILPTLEAVAALGNK Unmodified 1408.829 0.8289655 2206 Q12905 ILF2 Interleukin enhancer-binding factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.76 3 1 23 1 2 1 1 2 2 2 2 2 2 2 2 2 2 2 88.983 88.365 2;3 2.5668E-16 102472 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 120.09 99.22 987130000 244130000 255010000 29044000 6297800 19240000 33309000 16732000 28524000 19247000 62426000 41116000 44531000 24011000 45089000 118420000 24302 2206 22206 204612;204613;204614;204615;204616;204617;204618;204619;204620;204621;204622;204623;204624;204625;204626;204627;204628;204629;204630;204631;204632;204633;204634;204635;204636;204637;204638 163406;163407;163408;163409;163410;163411;163412;163413;163414;163415;163416;163417;163418;163419;163420;163421;163422;163423 163407 18 ILPTPETVPFR Unmodified 1268.7129 0.71287311 2269 Q13315 ATM Serine-protein kinase ATM yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 7 1 1 1 1 1 1 1 77.361 77.461 2 0.021312 89361 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 42.348 35.453 20660000 0 0 0 0 1810900 0 2773400 2609300 1969900 2585400 3634800 5276500 0 0 0 24303 2269 22207 204639;204640;204641;204642;204643;204644;204645 163424 163424 1 ILPTPPATLK Unmodified 1049.6485 0.64848194 317 O43314 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64.573 63.364 2 0.012748 80882 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.501 49.541 155760000 17385000 83709000 1523200 4082500 3754100 5017300 5455600 0 2783400 5670900 4291400 6374400 4120800 4735700 6852800 24304 317 22208 204646;204647;204648;204649;204650;204651;204652;204653;204654;204655;204656;204657;204658;204659 163425;163426;163427;163428;163429 163427 5 ILPVAASYSAVTR Unmodified 1346.7558 0.75580056 4126 Q9BSJ2 TUBGCP2 Gamma-tubulin complex component 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.648 70.72 2 0.0027083 82068 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 57.348 39.836 203570000 0 0 0 8167200 11708000 15649000 12343000 19643000 9342600 29481000 16187000 21775000 15309000 14029000 29938000 24305 4126 22209 204660;204661;204662;204663;204664;204665;204666;204667;204668;204669;204670;204671 163430;163431;163432;163433;163434;163435;163436;163437;163438;163439;163440;163441 163440 12 ILPVFDEPPNPTNVEESLK Unmodified 2137.0943 0.094300901 4746 Q9NYL9 TMOD3 Tropomodulin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.29 6 1 24 1 4 2 2 2 2 2 2 2 2 2 2 2 2 2 89.689 88.746 2;3 7.4311E-49 102957 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 174.39 157.18 1700200000 16528000 1217900000 18611000 4255000 28251000 26833000 14760000 29725000 21431000 72538000 55186000 59251000 15663000 29377000 89873000 24306 4746 22210 204672;204673;204674;204675;204676;204677;204678;204679;204680;204681;204682;204683;204684;204685;204686;204687;204688;204689;204690;204691;204692;204693;204694;204695;204696;204697;204698;204699;204700;204701;204702 163442;163443;163444;163445;163446;163447;163448;163449;163450;163451;163452;163453;163454;163455;163456;163457;163458;163459;163460;163461;163462;163463;163464 163464 22 ILPVGGIK Unmodified 795.52182 0.52182486 1379 P36776 LONP1 Lon protease homolog, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 64.81 58.818 2 0.017806 79169 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.74 2.3259 230990000 119020000 99726000 12242000 0 0 0 0 0 0 0 0 0 0 0 0 24307 1379 22211 204703;204704;204705 163465 163465 0 ILPVLCGLTVDPEK Unmodified 1552.8535 0.85346569 3907 Q96KG9 SCYL1 N-terminal kinase-like protein yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 92.966 89.443 2 0.00082568 111346 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.345 93.345 53339000 0 52614000 725050 0 0 0 0 0 0 0 0 0 0 0 0 24308 3907 22212 204706;204707;204708 163466;163467 163466 2 ILPVLGSQTGK Unmodified 1111.6601 0.66010926 5033 Q9UNI6 DUSP12 Dual specificity protein phosphatase 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 61.785 60.647 2 0.014381 78404 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 63.216 30.861 129390000 35607000 37317000 0 2766500 2203300 7114700 3369400 2708600 3688900 6050400 6651200 0 0 7513000 14397000 24309 5033 22213 204709;204710;204711;204712;204713;204714;204715;204716;204717;204718;204719;204720 163468;163469;163470;163471 163468 4 ILPVLGSQTGKI Unmodified 1224.7442 0.74417324 5033 Q9UNI6 DUSP12 Dual specificity protein phosphatase 12 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 77.908 77.226 2 0.042567 89332 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.064 37.244 66031000 21536000 0 0 2133200 2146900 0 4103100 2791800 2347800 4934200 5736100 7555100 0 3270800 9476200 24310 5033 22214 204721;204722;204723;204724;204725;204726;204727;204728;204729;204730;204731 163472;163473 163473 1 ILPVNLK Unmodified 795.52182 0.52182486 4973 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 56.528 57.119 2 0.026956 64569 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 77.944 6.5659 42763000 0 0 0 0 0 0 0 0 0 0 0 16661000 0 0 26101000 24311 4973 22215 204732;204733 163474 163474 1 ILPYRSMELK Oxidation (M) 1264.6849 0.6849438 4384 Q9H3R1 NDST4 Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 4;Heparan sulfate N-deacetylase 4;Heparan sulfate N-sulfotransferase 4 yes yes 0 1 1 By MS/MS By MS/MS 10 0 2 1 1 54.513 54.678 3 0.0091725 62285 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 44.203 18.16 5370600 0 0 0 0 0 0 0 3143500 2227000 0 0 0 0 0 0 24312 4384 22216 204734;204735 163475 163475 5841 1 ILQAFPDMHNSSISK Unmodified 1686.8399 0.83994089 5027 Q9UN79 SOX13 Transcription factor SOX-13 yes yes 0 0 0 By MS/MS 2 0 1 1 75.015 66.884 3 0.0051715 88348 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 41.838 31.641 8200700 8200700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24313 5027 22217 204736 163476 163476 1 ILQAGFK Unmodified 775.45922 0.4592246 2564 Q15691 MAPRE1 Microtubule-associated protein RP/EB family member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38.947 38.016 2 0.02594 47333 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 99.511 99.511 4473200000 2367500000 1250100000 322560000 0 3460900 57907000 37916000 43104000 17917000 66045000 67157000 47644000 36586000 46480000 108860000 24314 2564 22218 204737;204738;204739;204740;204741;204742;204743;204744;204745;204746;204747;204748;204749;204750 163477;163478;163479;163480;163481;163482;163483;163484 163482 8 ILQDGGLQVVEK Unmodified 1297.7242 0.72416608 304 O43175 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.5 3.91 1 12 3 12 5 8 3 1 1 1 1 1 1 1 1 1 1 1 1 63.441 61.16 2;3 3.0811E-15 76802 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 149.23 90.25 14729000000 357510000 10911000000 104570000 184750000 167840000 334800000 279580000 210780000 152120000 353280000 321790000 299150000 250360000 287600000 514380000 24315 304 22219 204751;204752;204753;204754;204755;204756;204757;204758;204759;204760;204761;204762;204763;204764;204765;204766;204767;204768;204769;204770;204771;204772;204773;204774;204775;204776;204777;204778 163485;163486;163487;163488;163489;163490;163491;163492;163493;163494;163495;163496;163497;163498;163499;163500;163501;163502;163503;163504;163505;163506;163507;163508;163509;163510;163511;163512;163513;163514;163515;163516;163517;163518;163519;163520;163521;163522;163523 163495 39 ILQDSLGGNCR Unmodified 1231.5979 0.5979197 1328 P33176;O60282;Q12840 KIF5B;KIF5C;KIF5A Kinesin-1 heavy chain;Kinesin heavy chain isoform 5C;Kinesin heavy chain isoform 5A yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 36.748 36.997 2 0.00048771 39724 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.647 49.474 89284000 0 0 0 0 8587400 7920300 6053400 6772400 4770200 0 9307700 13394000 12472000 7099800 12907000 24316 1328 22220 204779;204780;204781;204782;204783;204784;204785;204786;204787;204788 163524;163525;163526;163527;163528;163529;163530;163531;163532 163526 8 ILQEAGADISK Unmodified 1143.6136 0.61355299 3766 Q96BW5 PTER Phosphotriesterase-related protein yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 37.341 38.082 2 0.00061345 41138 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.489 45.973 8981300 0 0 0 0 0 0 0 0 0 0 0 2540000 0 0 6441300 24317 3766 22221 204789;204790 163533 163533 1 ILQEHEQIK Unmodified 1136.619 0.61897272 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 21.129 21.399 2 0.003237 20987 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.709 50.441 41697000 0 0 0 2602700 0 6037300 2897400 0 0 4228300 4583400 6402300 4328100 4322700 6294600 24318 2378 22222 204791;204792;204793;204794;204795;204796;204797;204798;204799 163534;163535;163536;163537;163538 163535 5 ILQELPSVSQETLK Unmodified 1583.877 0.8770379 3993 Q96ST2 IWS1 Protein IWS1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.89 2.72 3 1 24 1 2 1 2 2 2 2 2 2 2 2 2 2 2 2 75.541 74.914 2;3 6.3716E-19 86448 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 129.82 94.277 1780100000 11227000 916380000 11242000 30541000 46944000 51564000 46233000 52580000 44820000 82145000 97290000 129660000 69171000 78080000 112280000 24319 3993 22223 204800;204801;204802;204803;204804;204805;204806;204807;204808;204809;204810;204811;204812;204813;204814;204815;204816;204817;204818;204819;204820;204821;204822;204823;204824;204825;204826;204827 163539;163540;163541;163542;163543;163544;163545;163546;163547;163548;163549;163550;163551;163552;163553;163554;163555;163556 163549 16 ILQELYQFK Unmodified 1180.6492 0.64921022 2681 Q49AR2 C5orf22 UPF0489 protein C5orf22 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 81.454 76.318 2 0.0072303 95843 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.4 88.297 46851000 25298000 17346000 4206000 0 0 0 0 0 0 0 0 0 0 0 0 24320 2681 22224 204828;204829;204830 163557;163558;163559;163560 163557 4 ILQERAVLGANDPEK Unmodified 1651.8893 0.88933392 2569 Q15738 NSDHL Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 54.16 48.126 3 0.0036987 65822 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.297 28.309 48865000 44014000 0 4851200 0 0 0 0 0 0 0 0 0 0 0 0 24321 2569 22225 204831;204832 163561;163562 163561 2 ILQESIDVAPFTTK Unmodified 1560.8399 0.83992412 2561 Q15652 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 80.096 80.2 2 6.5937E-12 92762 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 124.1 93.03 57599000 0 0 0 0 3675300 3416500 4421400 4594400 4167200 7739900 6585700 5652800 4076600 4801300 8467600 24322 2561 22226 204833;204834;204835;204836;204837;204838;204839;204840;204841;204842;204843 163563;163564;163565;163566;163567;163568;163569;163570;163571;163572;163573;163574 163564 12 ILQETLNELDK Unmodified 1314.7031 0.70309628 1693 P52630 STAT2 Signal transducer and activator of transcription 2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 71.971 66.902 2 0.00039155 85098 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.79 66.34 176190000 0 176190000 0 0 0 0 0 0 0 0 0 0 0 0 0 24323 1693 22227 204844;204845 163575;163576 163575 2 ILQEYITQEGHK Unmodified 1457.7514 0.75144346 4232 Q9BXS5 AP1M1 AP-1 complex subunit mu-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching 6.87 3.84 5 1 9 2 2 2 1 1 1 1 1 1 1 1 1 49.321 47.151 2;3 2.3744E-14 64613 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 142 123.68 757030000 289670000 208240000 208500000 4756200 0 6691700 3051400 0 0 6018100 5305900 6449100 3726500 5572800 9040100 24324 4232 22228 204846;204847;204848;204849;204850;204851;204852;204853;204854;204855;204856;204857;204858;204859;204860 163577;163578;163579;163580;163581;163582;163583;163584 163581 6 ILQEYVEHQVDDAMMANAAQK 2 Oxidation (M) 2435.1097 0.10970974 864 P08243 ASNS Asparagine synthetase [glutamine-hydrolyzing] yes yes 0 2 0 By MS/MS By MS/MS 6 4 1 1 1 1 67.183 65.408 3 1.0541E-43 80771 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 126.22 118.03 40842000 0 0 33955000 0 0 0 0 0 0 6886700 0 0 0 0 0 24325 864 22229 204861;204862 163585;163586 163586 1104;1105 1 ILQEYVEHQVDDAMMANAAQK Oxidation (M) 2419.1148 0.11479512 864 P08243 ASNS Asparagine synthetase [glutamine-hydrolyzing] yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 2 2 2 79.457 74.477 3 2.9814E-30 97194 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.98 108.59 183930000 33004000 101090000 49830000 0 0 0 0 0 0 0 0 0 0 0 0 24326 864 22229 204863;204864;204865;204866;204867;204868 163587;163588;163589;163590;163591;163592;163593 163587 1104;1105 7 ILQEYVEHQVDDAMMANAAQK Unmodified 2403.1199 0.1198805 864 P08243 ASNS Asparagine synthetase [glutamine-hydrolyzing] yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 83.721 79.061 3 8.8562E-48 100332 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 124.25 121.44 177920000 22008000 141860000 14056000 0 0 0 0 0 0 0 0 0 0 0 0 24327 864 22229 204869;204870;204871;204872 163594;163595;163596;163597;163598 163597 5 ILQGAPEILDR Unmodified 1223.6874 0.68738664 3137 Q86TP1 PRUNE Protein prune homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 70.229 70.441 2 0.0037222 80289 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.216 2.2432 32995000 0 0 0 0 0 4500900 0 0 0 4389300 5090400 5073200 2581300 4483800 6875700 24328 3137 22230 204873;204874;204875;204876;204877;204878;204879 163599;163600;163601;163602;163603;163604 163601 6 ILQGGVGIPHIR Unmodified 1258.751 0.75098995 1551 P48729 CSNK1A1 Casein kinase I isoform alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.505 65.591 3 0.0024294 75301 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 44.847 31.756 76819000 0 0 0 4481400 2980800 8319300 4006600 5753900 4115400 4265400 5889700 7336200 6346500 5461900 17861000 24329 1551 22231 204880;204881;204882;204883;204884;204885;204886;204887;204888;204889;204890;204891 163605;163606;163607;163608;163609;163610 163605 6 ILQHSHGIEEER Unmodified 1446.7215 0.72154031 3693 Q92974 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 17.879 18.064 3 1.5174E-05 17645 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 91.858 63.996 87618000 0 0 0 2761900 4344600 7205200 3867300 5639600 4290300 8694000 8618100 12852000 10221000 7179700 11944000 24330 3693 22232 204892;204893;204894;204895;204896;204897;204898;204899;204900;204901;204902;204903 163611;163612;163613;163614;163615;163616;163617;163618;163619;163620;163621 163617 10 ILQLDLENK Unmodified 1084.6128 0.61282471 3780 Q96CN9 GCC1 GRIP and coiled-coil domain-containing protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 67.189 67.435 2 0.012256 77365 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 61.582 21.484 10308000 0 0 0 0 0 0 0 0 0 4816200 0 3096200 0 2395700 0 24331 3780 22233 204904;204905;204906 163622 163622 1 ILQLQEK Unmodified 870.51747 0.51746776 5045 Q9UNY4 TTF2 Transcription termination factor 2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 41.968 37.051 2 0.035172 48406 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.48 15.401 37414000 0 37414000 0 0 0 0 0 0 0 0 0 0 0 0 0 24332 5045 22234 204907;204908 163623 163623 0 ILQNQSK Unmodified 829.46577 0.46576654 4388 Q9H410 DSN1 Kinetochore-associated protein DSN1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 7.2755 4.2836 2 0.031789 6386 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 146.94 64.682 259720000 63532000 76199000 119980000 0 0 0 0 0 0 0 0 0 0 0 0 24333 4388 22235 204909;204910;204911 163624 163624 0 ILQNYDNK Unmodified 1006.5084 0.50835964 1601;32 P49792;P0DJD0;P0DJD1;A6NKT7;Q7Z3J3 RANBP2;RGPD1;RGPD2;RGPD3;RGPD4 E3 SUMO-protein ligase RanBP2;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RanBP2-like and GRIP domain-containing protein 3;RanBP2-like and GRIP domain-containing protein 4 no no 0 0 0 By MS/MS 2.5 0.5 1 1 2 24.722 20.633 2 0.0086489 27002 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.78 55.578 94523000 0 94523000 0 0 0 0 0 0 0 0 0 0 0 0 0 24334 1601;32 22236 204912;204913 163625 163625 1 ILQPNTTDEFVIPLDPR Unmodified 1967.0364 0.036392091 4641 Q9NU22 MDN1 Midasin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 89.307 89.407 2 7.7491E-10 103789 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 97.214 81.675 30823000 0 0 0 0 1823300 2368700 1628300 3037500 0 5099900 3440700 3399400 1709800 2407300 5908000 24335 4641 22237 204914;204915;204916;204917;204918;204919;204920;204921;204922;204923 163626;163627;163628;163629;163630;163631;163632;163633 163627 8 ILQQIPDHPK Unmodified 1187.6663 0.66625727 2160 Q08554 DSC1 Desmocollin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 2 24 1 1 2 2 2 2 2 2 2 2 2 2 2 2 38.188 37.95 2;3 3.444E-10 42146 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 179.68 156.25 3018400000 12720000 0 9157400 453160000 166150000 182080000 135620000 679300000 118560000 198630000 199110000 336860000 290660000 117440000 119000000 24336 2160 22238 204924;204925;204926;204927;204928;204929;204930;204931;204932;204933;204934;204935;204936;204937;204938;204939;204940;204941;204942;204943;204944;204945;204946;204947;204948;204949 163634;163635;163636;163637;163638;163639;163640;163641;163642;163643;163644;163645;163646;163647;163648;163649;163650;163651;163652;163653;163654;163655;163656 163635 8 ILQQQQMK Unmodified 1015.5485 0.54845032 3662 Q92793 CREBBP CREB-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 2 1 1 1 1 1 1 1 1 1 19.306 19.496 2 0.004927 18676 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 128.82 41.532 77594000 0 0 0 0 5504100 5203600 4631100 5778700 3864400 0 9953200 11664000 7887200 6410100 16697000 24337 3662 22239 204950;204951;204952;204953;204954;204955;204956;204957;204958;204959;204960;204961 163657;163658;163659;163660;163661;163662;163663;163664;163665 163662 7 ILQQQQMK Oxidation (M) 1031.5434 0.54336494 3662 Q92793 CREBBP CREB-binding protein yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 8.8483 8.9996 2 0.017951 7489 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 57.463 21.278 28896000 0 0 0 3870600 0 2882200 0 0 1911200 0 5797900 7334100 4516400 2583800 0 24338 3662 22239 204962;204963;204964;204965;204966;204967;204968 163666;163667 163667 5183 1 ILQQSVVK Unmodified 913.55967 0.55966693 4368 Q9H2J4 PDCL3 Phosducin-like protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 31.377 31.762 2 0.016731 34108 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 66.799 7.882 56086000 0 0 0 0 0 7862000 0 0 0 4328500 9948900 12734000 4396300 6408700 10408000 24339 4368 22240 204969;204970;204971;204972;204973;204974;204975 163668;163669;163670 163670 3 ILQTSIDAK Unmodified 987.56006 0.56006086 2996 Q6YHU6 THADA Thyroid adenoma-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 40.012 35.578 2 0.007643 46232 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.933 23.744 122860000 0 121290000 1567900 0 0 0 0 0 0 0 0 0 0 0 0 24340 2996 22241 204976;204977;204978;204979 163671;163672;163673;163674 163672 4 ILQVSFK Unmodified 833.50109 0.50108942 2566 Q15717 ELAVL1 ELAV-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 3 15 1 1 1 2 2 1 2 1 1 1 1 1 1 1 1 61.222 60.236 2 0.023384 68577 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 88.029 21.035 525290000 177920000 47181000 17538000 19618000 24337000 20996000 22959000 17848000 19033000 23820000 25458000 23378000 22746000 25893000 36570000 24341 2566 22242 204980;204981;204982;204983;204984;204985;204986;204987;204988;204989;204990;204991;204992;204993;204994;204995;204996;204997 163675;163676;163677;163678;163679;163680;163681;163682;163683;163684;163685;163686;163687;163688 163675 14 ILRPWQSSETR Unmodified 1371.7259 0.72589741 2554 Q15637 SF1 Splicing factor 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 41.807 42.078 3 0.00021607 47095 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 89.301 67.542 308910000 0 0 0 0 14297000 0 26998000 30709000 21528000 0 27361000 65753000 24922000 34072000 63272000 24342 2554 22243 204998;204999;205000;205001;205002;205003;205004;205005;205006 163689;163690;163691;163692;163693;163694;163695;163696 163689 4 ILSACEK Unmodified 819.41604 0.41603916 1721 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 14.909 15.049 2 0.025588 13523 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.462 12.064 178210000 0 0 0 8526700 7146700 12308000 11535000 7852500 10625000 16648000 27030000 0 22230000 25233000 29072000 24343 1721 22244 205007;205008;205009;205010;205011;205012;205013;205014;205015;205016;205017 163697;163698;163699 163698 3 ILSCGELIPK Unmodified 1128.6213 0.62128091 2288 Q13427 PPIG Peptidyl-prolyl cis-trans isomerase G yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 65.812 65.866 2 0.0074048 75700 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 62.546 27.251 48172000 0 0 0 2532100 3097000 3924600 3703900 3714000 3057000 4698600 5854700 0 4770600 5245400 7574600 24344 2288 22245 205018;205019;205020;205021;205022;205023;205024;205025;205026;205027;205028 163700;163701;163702;163703;163704 163704 5 ILSCGEVIHVK Unmodified 1253.6802 0.68019277 4374 Q9H2U2 PPA2 Inorganic pyrophosphatase 2, mitochondrial yes yes 0 0 0 By MS/MS 2 0 2 2 55.422 51.545 2;3 0.0044806 64539 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 81.017 55.395 38645000 0 0 38645000 0 0 0 0 0 0 0 0 0 0 0 0 24345 4374 22246 205029;205030 163705;163706 163706 1 ILSDDVPIRDYR Unmodified 1460.7623 0.7623425 1745 P54725 RAD23A UV excision repair protein RAD23 homolog A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.558 60.662 3 0.0053866 68278 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 49.448 34.061 192390000 0 0 0 2916400 3147000 7082700 5221600 5725600 3634100 8948400 24654000 34996000 8393500 22840000 64836000 24346 1745 22247 205031;205032;205033;205034;205035;205036;205037;205038;205039;205040;205041;205042 163707;163708;163709;163710;163711 163710 4 ILSDDVPIRDYRIDEK Unmodified 1946.0109 0.010905622 1745 P54725 RAD23A UV excision repair protein RAD23 homolog A yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS 4 3.03 4 4 2 4 3 1 2 72.585 68.6 3;4 1.1962E-18 89252 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 124.25 97.816 694580000 592000000 78689000 3490800 0 0 0 0 0 0 0 0 0 0 0 20403000 24347 1745 22248 205043;205044;205045;205046;205047;205048;205049;205050;205051;205052 163712;163713;163714;163715;163716;163717;163718;163719;163720 163719 7 ILSDIGLEYCK Unmodified 1309.6588 0.65878863 4371 Q9H2P0 ADNP Activity-dependent neuroprotector homeobox protein yes yes 0 0 0 By MS/MS 2 0 1 1 76.604 71.766 2 3.4591E-05 89679 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.5 97.251 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24348 4371 22249 205053 163721 163721 1 ILSDTYTVEK Unmodified 1167.6023 0.60231961 4413 Q9H6D7 HAUS4 HAUS augmin-like complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 43.829 43.994 2 0.0044901 49233 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 83.647 37.221 36573000 0 0 0 0 5783200 0 0 0 0 8608800 0 0 0 7167900 15013000 24349 4413 22250 205054;205055;205056;205057;205058;205059;205060 163722;163723;163724;163725;163726;163727;163728 163723 7 ILSDVTHSAVFGVPASK Unmodified 1726.9254 0.92538508 2651 Q2M2I8 AAK1 AP2-associated protein kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 72.938 73.03 3 0.0028388 84140 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 41.386 30.728 70192000 0 0 0 3887500 0 10061000 0 0 6385600 6871900 7603100 9673900 6375600 7188200 12145000 24350 2651 22251 205061;205062;205063;205064;205065;205066;205067;205068;205069 163729;163730;163731 163729 3 ILSFIQDQEEDYLK Unmodified 1739.8618 0.86178177 3194 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 88.744 83.599 2 5.2488E-44 105201 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 170.52 135.8 83121000 16881000 65073000 1166400 0 0 0 0 0 0 0 0 0 0 0 0 24351 3194 22252 205070;205071;205072 163732;163733;163734 163732 3 ILSGNLPK Unmodified 840.5069 0.50690308 2805 Q5VIR6 VPS53 Vacuolar protein sorting-associated protein 53 homolog yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 40.446 40.203 2 0.022664 45464 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 60.972 10.006 278670000 0 150190000 0 9112600 9139300 13288000 10998000 11102000 7453500 12890000 10207000 10381000 11861000 10070000 11976000 24352 2805 22253 205073;205074;205075;205076;205077;205078;205079;205080;205081;205082;205083;205084;205085 163735;163736;163737 163737 3 ILSGPFVQK Unmodified 987.57532 0.57531699 1134 P22102 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.944 56.07 2 0.01111 63043 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 102.72 26.127 317490000 0 0 0 13577000 13442000 25852000 21310000 19090000 11234000 29011000 36307000 30724000 20752000 31720000 64475000 24353 1134 22254 205086;205087;205088;205089;205090;205091;205092;205093;205094;205095;205096;205097 163738;163739;163740;163741;163742 163742 1 ILSGVVTK Unmodified 815.51165 0.5116541 1888 P62280 RPS11 40S ribosomal protein S11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.338 36.518 2 0.011381 40255 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 77.058 12.281 1701400000 0 0 0 100090000 119770000 104920000 119990000 131660000 77309000 144650000 151880000 219230000 169940000 142340000 219580000 24354 1888 22255 205098;205099;205100;205101;205102;205103;205104;205105;205106;205107;205108;205109 163743;163744;163745;163746;163747;163748;163749;163750 163747 8 ILSHGGFR Unmodified 885.48209 0.48208531 2206 Q12905 ILF2 Interleukin enhancer-binding factor 2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 22.752 22.66 2 0.039557 24083 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 50.632 23.511 11445000 0 0 0 5614700 0 5830600 0 0 0 0 0 0 0 0 0 24355 2206 22256 205110;205111 163751 163751 1 ILSISADIETIGEILK Unmodified 1713.9764 0.9764176 1868 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 100.96 96.518 2 1.0757E-05 120378 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 123.95 102.19 43077000 29151000 12463000 1462800 0 0 0 0 0 0 0 0 0 0 0 0 24356 1868 22257 205112;205113;205114;205115;205116 163752;163753;163754;163755;163756 163755 5 ILSKPIEVQVGGR Unmodified 1394.8245 0.82454882 3041 Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 52.825 52.965 3 0.0016433 58549 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.115 34.762 123180000 0 0 0 6881800 7839600 4066900 12483000 10853000 0 9809300 19333000 13921000 16052000 9316800 12621000 24357 3041 22258 205117;205118;205119;205120;205121;205122;205123;205124;205125;205126;205127 163757;163758;163759;163760;163761;163762;163763;163764 163758 7 ILSLCPEIK Unmodified 1071.5998 0.59981719 599 O94903 PROSC Proline synthase co-transcribed bacterial homolog protein yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 76.196 72.385 2 0.001028 90494 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 141.52 98.604 366400000 0 359420000 6986800 0 0 0 0 0 0 0 0 0 0 0 0 24358 599 22259 205128;205129 163765;163766 163765 2 ILSLELMK Oxidation (M) 961.5518 0.55180436 478 O75330 HMMR Hyaluronan mediated motility receptor yes yes 0 1 0 By MS/MS 10 0 1 1 66.854 67.272 2 0.044624 77061 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 65.252 18.185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24359 478 22260 205130 163767 163767 1 ILSMAEGIK Unmodified 960.5314 0.53140327 4733 Q9NXV6 CDKN2AIP CDKN2A-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56.556 55.463 2 0.0052023 62737 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 80.438 26.884 308730000 9702700 116030000 9449800 9694400 10019000 11969000 13065000 12016000 9945100 14210000 17971000 14723000 13686000 16959000 29287000 24360 4733 22261 205131;205132;205133;205134;205135;205136;205137;205138;205139;205140;205141;205142;205143;205144;205145 163768;163769;163770;163771;163772;163773;163774;163775;163776;163777;163778;163779;163780;163781;163782 163779 13 ILSMAEGIK Oxidation (M) 976.52632 0.52631789 4733 Q9NXV6 CDKN2AIP CDKN2A-interacting protein yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 35.515 34.922 2 0.006833 38485 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 64.42 19.81 109960000 0 28733000 4651700 4930800 4968100 7349300 7464500 4084000 0 8548900 10149000 11733000 10067000 7275800 0 24361 4733 22261 205146;205147;205148;205149;205150;205151;205152;205153;205154;205155;205156;205157 163783;163784;163785;163786;163787;163788;163789 163783 6110 7 ILSNNPSK Unmodified 871.47633 0.47633123 1547 P48637 GSS Glutathione synthetase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.8 3.12 3 1 1 1 2 1 1 12.213 9.6992 2 0.0058249 12541 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.98 67.945 1047400000 84261000 948850000 7389200 0 0 0 0 0 0 0 6931400 0 0 0 0 24362 1547 22262 205158;205159;205160;205161;205162 163790;163791;163792;163793 163790 3 ILSNVISK Unmodified 872.53312 0.53311783 3089 Q7Z401 DENND4A C-myc promoter-binding protein yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 42.476 42.587 2 0.044838 48313 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 48.756 7.5285 21699000 0 0 0 0 2773600 0 3836500 0 2610000 3436000 4667000 0 4376400 0 0 24363 3089 22263 205163;205164;205165;205166;205167;205168 163794 163794 1 ILSQERIQSLK Unmodified 1313.7667 0.76669959 4552 Q9NPI1 BRD7 Bromodomain-containing protein 7 yes yes 0 0 1 By MS/MS 2 0 1 1 52.457 44.442 3 0.032254 61222 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 32.999 15.26 14154000 14154000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24364 4552 22264 205169 163795 163795 1 ILSQSTDSLNMR Oxidation (M) 1379.6715 0.67147858 3693 Q92974 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 36.33 36.546 2 1.3871E-05 39728 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 103.88 94.082 194040000 0 0 0 11947000 0 15460000 22946000 15498000 15623000 19328000 0 29428000 26509000 16346000 20955000 24365 3693 22265 205170;205171;205172;205173;205174;205175;205176;205177;205178;205179 163796;163797;163798;163799;163800;163801;163802;163803;163804;163805 163804 5259 10 ILSQSTDSLNMR Unmodified 1363.6766 0.67656396 3693 Q92974 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 49.92 49.98 2 2.6393E-07 56293 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 137.95 93.604 273530000 0 0 0 17820000 29104000 0 26511000 31889000 0 40947000 0 0 33404000 32024000 61832000 24366 3693 22265 205180;205181;205182;205183;205184;205185;205186;205187;205188 163806;163807;163808;163809;163810;163811;163812 163808 6 ILSQVSYR Unmodified 964.53418 0.53418046 2406 Q14432 PDE3A cGMP-inhibited 3',5'-cyclic phosphodiesterase A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.386 39.566 2 0.006079 42641 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 103.91 62.605 260120000 0 0 0 13336000 18446000 20373000 14554000 19177000 15508000 27724000 28383000 27156000 22557000 20195000 32709000 24367 2406 22266 205189;205190;205191;205192;205193;205194;205195;205196;205197;205198;205199;205200 163813 163813 1 ILSREDTEEISCR Unmodified 1606.7621 0.7620845 710 O95999 BCL10 B-cell lymphoma/leukemia 10 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.37 36.55 3 9.5004E-05 39135 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.279 63.028 94521000 0 0 0 5718800 5058200 5711000 6073200 5598500 3634200 6517700 9791700 14961000 7381600 8810300 15265000 24368 710 22267 205201;205202;205203;205204;205205;205206;205207;205208;205209;205210;205211;205212 163814;163815;163816;163817;163818;163819;163820;163821;163822;163823;163824 163817 10 ILSSDDYGK Unmodified 996.47639 0.47639081 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 6 4 3 3 1 1 1 1 1 1 26.532 24.592 2 0.0059097 26115 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 76.478 57.118 721070000 12884000 643080000 3239200 0 0 0 0 0 0 0 0 0 15499000 15701000 30671000 24369 2047 22268 205213;205214;205215;205216;205217;205218 163825;163826;163827;163828 163828 3 ILSTHLLESDSLTPEYLK Unmodified 2058.0885 0.088487241 291 O15516 CLOCK Circadian locomoter output cycles protein kaput yes yes 0 0 0 By MS/MS 2 0 1 1 88.996 80.865 3 0.0048917 105162 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 20.812 12.167 16314000 16314000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24370 291 22269 205219 163829 163829 1 ILSTIDRELLK Unmodified 1299.7762 0.77620165 1482 P43686 PSMC4 26S protease regulatory subunit 6B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 68.361 68.425 3 0.00017444 78071 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 84.479 58.362 160750000 0 0 0 2836300 5945100 19866000 0 0 7882900 33193000 21876000 27765000 3710200 5045800 32635000 24371 1482 22270 205220;205221;205222;205223;205224;205225;205226;205227;205228;205229 163830;163831;163832;163833;163834;163835;163836;163837 163837 8 ILSTLVK Unmodified 772.50584 0.50584045 4721 Q9NX74 DUS2 tRNA-dihydrouridine(20) synthase [NAD(P)+]-like yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 55.096 48.12 2 0.041503 62622 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.24 0 81632000 44200000 37431000 0 0 0 0 0 0 0 0 0 0 0 0 0 24372 4721 22271 205230;205231 163838 163838 0 ILSVADSNK Unmodified 945.51311 0.51311067 2421 Q14651 PLS1 Plastin-1 yes yes 0 0 0 By MS/MS 10 0 1 1 26.824 27.515 2 0.030461 29052 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.157 4.2992 4859500 0 0 0 0 0 0 0 0 0 0 0 4859500 0 0 0 24373 2421 22272 205232 163839 163839 1 ILSVDGNK Unmodified 844.46543 0.46543219 136 O00267 SUPT5H Transcription elongation factor SPT5 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 26.128 25.354 2 0.0083611 26843 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 86.472 23.494 1052600000 19851000 526180000 0 0 44737000 13645000 0 0 0 57292000 12238000 94515000 87985000 66968000 129200000 24374 136 22273 205233;205234;205235;205236;205237;205238;205239;205240;205241;205242 163840;163841;163842;163843 163842 3 ILSVELPK Unmodified 897.55352 0.55351892 4120 Q9BRX5 GINS3 DNA replication complex GINS protein PSF3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 69.507 69.574 2 0.017693 79030 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.252 33.963 49173000 0 0 0 2168900 1912000 3287900 2239400 2475700 0 5110800 8588300 7029600 3096900 3813400 9450800 24375 4120 22274 205243;205244;205245;205246;205247;205248;205249;205250;205251;205252;205253 163844;163845;163846;163847;163848;163849 163846 6 ILTAALTCPK Unmodified 1086.6107 0.61071622 2830 Q5VZ89 DENND4C DENN domain-containing protein 4C yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 57.371 55.214 2 4.9454E-05 74859 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 124.23 73.624 83703000 31998000 28788000 0 0 0 0 0 2181800 2936400 0 0 10237000 7561800 0 0 24376 2830 22275 205254;205255;205256;205257;205258;205259;205260;205261 163850;163851;163852;163853;163854;163855 163852 6 ILTATIENNR Unmodified 1143.6248 0.62478638 73;981 CON__P13646-1;P13646;CON__ENSEMBL:ENSP00000377550 KRT13 Keratin, type I cytoskeletal 13 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 41.757 41.89 2 0.00047115 46666 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 157.68 100.12 + 630440000 0 0 0 16225000 9476200 0 173660000 287090000 0 1907300 7765500 59938000 69268000 5108200 0 24377 73;981 22276 205262;205263;205264;205265;205266;205267;205268;205269;205270;205271 163856;163857;163858;163859;163860;163861;163862;163863;163864 163861 9 ILTDDFADK Unmodified 1036.5077 0.50769094 2486 Q15047 SETDB1 Histone-lysine N-methyltransferase SETDB1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 50.145 50.339 2 0.014892 56981 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 57.859 14.612 18753000 0 0 0 0 0 0 0 5544400 0 0 0 0 0 13209000 0 24378 2486 22277 205272;205273 163865;163866 163865 2 ILTDEAVSGWK Unmodified 1217.6292 0.62920306 3701 Q93008 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 64.457 64.277 2 0.0070215 73768 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 55.084 16.998 10864000 0 0 0 2638800 0 4104700 0 4120400 0 0 0 0 0 0 0 24379 3701 22278 205274;205275;205276 163867;163868 163867 2 ILTDIMWPIIAK Oxidation (M) 1428.8051 0.80505893 2230 Q13057 COASY Bifunctional coenzyme A synthase;Phosphopantetheine adenylyltransferase;Dephospho-CoA kinase yes yes 0 1 0 By MS/MS 2 0 1 1 96.775 88.644 2 0.014583 114533 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.55 41.935 6550200 6550200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24380 2230 22279 205277 163869 163869 3623 1 ILTDIMWPIIAK Unmodified 1412.8101 0.81014431 2230 Q13057 COASY Bifunctional coenzyme A synthase;Phosphopantetheine adenylyltransferase;Dephospho-CoA kinase yes yes 0 0 0 By MS/MS 2 0 1 1 99.416 91.285 2 0.0097162 117718 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.465 37.443 5335100 5335100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24381 2230 22279 205278 163870 163870 1 ILTEAEIDAHLVALAERD Unmodified 1978.0371 0.037120373 1819 P60900 PSMA6 Proteasome subunit alpha type-6 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 93.281 87.453 3 0.0036041 111746 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 39.849 29.791 6487400 6487400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24382 1819 22280 205279;205280 163871;163872;163873 163873 3 ILTENLCEGTEDLDK Unmodified 1748.8138 0.8138453 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 65.983 66.035 2 6.0704E-191 75485 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 227.2 204.48 314480000 0 0 0 16274000 22105000 25962000 19220000 27362000 22060000 33648000 43707000 0 33626000 37565000 32956000 24383 3023 22281 205281;205282;205283;205284;205285;205286;205287;205288;205289;205290;205291 163874;163875;163876;163877;163878;163879;163880;163881;163882;163883 163875 10 ILTERGYSFTTTAER Unmodified 1743.8792 0.87916317 1951;1815 P60709;P63261 ACTB;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.321 55.451 3 3.4201E-05 62459 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 75.911 52.773 427330000 0 0 0 24007000 26026000 28101000 43012000 26793000 32486000 22068000 35379000 87731000 35833000 24852000 41047000 24384 1815;1951 22282 205292;205293;205294;205295;205296;205297;205298;205299;205300;205301;205302;205303 163884;163885;163886;163887;163888;163889;163890;163891;163892;163893;163894;163895;163896 163894 12 ILTFDQLALDSPK Unmodified 1459.7922 0.79224564 2133 Q07020 RPL18 60S ribosomal protein L18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 86.664 85.612 2 8.0147E-90 99012 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 199.68 162.49 1560400000 30918000 685530000 21381000 23306000 35570000 42676000 38640000 49525000 47593000 92072000 86533000 93881000 66398000 86887000 159440000 24385 2133 22283 205304;205305;205306;205307;205308;205309;205310;205311;205312;205313;205314;205315;205316;205317;205318;205319;205320 163897;163898;163899;163900;163901;163902;163903;163904;163905;163906;163907;163908;163909;163910;163911;163912;163913;163914;163915;163916 163901 20 ILTFPEK Unmodified 846.48511 0.485105 217 O14802 POLR3A DNA-directed RNA polymerase III subunit RPC1 yes yes 0 0 0 By MS/MS By MS/MS By matching 2 0 3 1 1 1 61.572 55.587 2 0.038085 71258 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.305 50.192 69142000 8326400 53901000 6914400 0 0 0 0 0 0 0 0 0 0 0 0 24386 217 22284 205321;205322;205323 163917 163917 1 ILTGGADK Unmodified 773.42832 0.42831841 5017 Q9UMS4 PRPF19 Pre-mRNA-processing factor 19 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 8.17 3.18 1 2 9 1 2 1 1 1 1 1 1 1 1 1 12.71 11.933 2 0.0087284 10258 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.212 18.18 1851300000 1561200 1648900000 0 0 19479000 30701000 25420000 20921000 19512000 32828000 377500 681220 0 0 50874000 24387 5017 22285 205324;205325;205326;205327;205328;205329;205330;205331;205332;205333;205334;205335 163918;163919;163920;163921;163922 163920 4 ILTGLNYEAPK Unmodified 1217.6656 0.66558856 2569 Q15738 NSDHL Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 62.739 62.513 2 1.9751E-05 72414 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 128.86 103.6 116920000 0 0 0 21792000 27964000 0 28011000 39151000 0 0 0 0 0 0 0 24388 2569 22286 205336;205337;205338;205339 163923;163924;163925;163926;163927 163926 5 ILTGTDAPK Unmodified 914.5073 0.50729701 1656 P51532 SMARCA4 Transcription activator BRG1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.25 3.34 2 1 1 2 1 1 27.235 24.275 2 0.0055928 25066 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 77.318 20.771 626740000 1719700 593710000 0 0 0 0 0 0 0 0 0 0 0 31308000 0 24389 1656 22287 205340;205341;205342;205343 163928;163929;163930 163930 3 ILTIEVK Unmodified 814.51641 0.51640513 1191 P25685 DNAJB1 DnaJ homolog subfamily B member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.6 3.67 3 7 1 1 1 2 1 1 2 1 59.329 57.789 2 0.023527 63900 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 92.467 18.028 305830000 44705000 133650000 21622000 0 0 0 0 0 0 0 21065000 11425000 7671600 21384000 44306000 24390 1191 22288 205344;205345;205346;205347;205348;205349;205350;205351;205352;205353 163931;163932;163933;163934;163935;163936;163937;163938;163939;163940;163941 163932 11 ILTINEDGSLGLK Unmodified 1371.7609 0.76094551 5074 Q9UQR1 ZNF148 Zinc finger protein 148 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By matching 7.18 3.74 3 1 7 1 2 1 1 1 1 1 1 1 1 77.777 76.132 2 5.8024E-25 94317 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 182.71 129.54 255020000 9087000 220800000 6133800 0 1433700 0 1099200 0 0 3396500 2802100 2041700 0 2632400 5590900 24391 5074 22289 205354;205355;205356;205357;205358;205359;205360;205361;205362;205363;205364 163942;163943;163944;163945;163946 163943 4 ILTLENQVYSMK Oxidation (M) 1453.7487 0.74866627 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 64.759 64.846 2 0.00015097 74162 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 83.869 38.501 50195000 0 0 0 2279000 2443800 2797000 5069500 3775300 2776900 3630200 5698500 6443800 6481000 3039800 5759700 24392 2291 22290 205365;205366;205367;205368;205369;205370;205371;205372;205373;205374;205375;205376;205377 163947;163948;163949;163950;163951;163952;163953;163954;163955;163956;163957;163958 163953 3748 12 ILTLENQVYSMK Unmodified 1437.7538 0.75375164 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 76.374 75.664 2 8.3058E-15 94098 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145.89 108.7 73956000 0 31398000 0 0 4542500 0 0 4980500 0 0 8321200 0 4478100 0 20236000 24393 2291 22290 205378;205379;205380;205381;205382;205383;205384;205385 163959;163960;163961;163962;163963;163964;163965;163966 163960 8 ILTLGEVPK Unmodified 968.59063 0.59063271 4923 Q9UIA9 XPO7 Exportin-7 yes yes 0 0 0 By MS/MS 10 0 1 1 65.96 66.497 2 0.013232 75535 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.853 50.201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24394 4923 22291 205386 163967 163967 1 ILTLSQIGR Unmodified 999.60768 0.60767976 2602 Q16401 PSMD5 26S proteasome non-ATPase regulatory subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.17 68.251 2 0.0034222 79158 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 94.114 27.082 334200000 0 0 0 14245000 13107000 24853000 20349000 17621000 12659000 41328000 35399000 33733000 23670000 28472000 68764000 24395 2602 22292 205387;205388;205389;205390;205391;205392;205393;205394;205395;205396;205397;205398 163968;163969;163970;163971;163972;163973;163974;163975;163976;163977 163976 10 ILTNFTGVMPPQFK Oxidation (M) 1607.8381 0.83814998 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 82.353 82.392 2 0.00026183 95354 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 72.006 60.274 23288000 0 0 0 1087400 0 6124000 0 3979400 2314200 4349800 0 5433200 0 0 0 24396 19 22293 205399;205400;205401;205402;205403;205404 163978;163979;163980;163981;163982 163979 17 5 ILTPIIFK Unmodified 943.61064 0.61063987 1997 P82650 MRPS22 28S ribosomal protein S22, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 83.634 83.068 2 0.0062194 96242 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 102.72 67.911 78951000 7569500 0 0 2905900 3687600 5103400 2314700 2434300 3091200 8803500 6662900 7820700 6745900 8673300 13138000 24397 1997 22294 205405;205406;205407;205408;205409;205410;205411;205412;205413;205414;205415;205416;205417 163983;163984;163985;163986;163987;163988;163989;163990;163991;163992;163993;163994;163995 163984 13 ILTPLVSLDTPGK Unmodified 1352.7915 0.79151736 4506 Q9HC38 GLOD4 Glyoxalase domain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 84.204 82.792 2 1.2129E-17 99327 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 127.42 69.825 2375000000 332900000 1862200000 89035000 4291900 3780800 11500000 4498700 0 6986000 7154400 22890000 22901000 6950700 0 0 24398 4506 22295 205418;205419;205420;205421;205422;205423;205424;205425;205426;205427;205428;205429;205430 163996;163997;163998;163999;164000;164001;164002;164003;164004;164005 163999 10 ILTSDQHSVVISSAK Unmodified 1583.8519 0.85188578 2631 Q16760 DGKD Diacylglycerol kinase delta yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 48.93 43.024 3 0.0056748 54329 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 44.968 23.667 14953000 9663600 0 5289000 0 0 0 0 0 0 0 0 0 0 0 0 24399 2631 22296 205431;205432 164006;164007 164007 1 ILTTASSHEFEHTK Unmodified 1599.7893 0.78928553 2638 Q16851 UGP2 UTP--glucose-1-phosphate uridylyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.53 6 4 22 4 4 2 1 2 2 2 2 2 2 2 2 2 1 2 32.856 31.45 3;4 1.9959E-44 45958 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 166.38 145.58 4110800000 2144300000 863950000 460940000 10275000 19815000 74016000 38444000 31059000 35562000 45737000 56749000 81119000 36387000 34237000 178220000 24400 2638 22297 205433;205434;205435;205436;205437;205438;205439;205440;205441;205442;205443;205444;205445;205446;205447;205448;205449;205450;205451;205452;205453;205454;205455;205456;205457;205458;205459;205460;205461;205462;205463;205464 164008;164009;164010;164011;164012;164013;164014;164015;164016;164017;164018;164019;164020;164021;164022;164023;164024;164025;164026;164027;164028;164029;164030;164031;164032;164033;164034;164035;164036 164023 21 ILTTEGR Unmodified 788.43922 0.43921744 2152 Q08211 DHX9 ATP-dependent RNA helicase A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 15.892 15.991 2 0.02333 15974 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 90.986 19.036 198430000 0 0 0 26423000 19892000 24066000 0 0 0 0 0 0 45513000 37560000 44981000 24401 2152 22298 205465;205466;205467;205468;205469;205470 164037;164038;164039;164040 164040 4 ILTTIEDLDQK Unmodified 1287.6922 0.69219725 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 68.984 67.703 2 3.6635E-09 85957 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.33 83.609 1779700000 25433000 1261800000 18372000 33080000 21968000 49994000 32777000 34224000 28931000 62466000 39226000 49424000 37667000 31058000 53304000 24402 643 22299 205471;205472;205473;205474;205475;205476;205477;205478;205479;205480;205481;205482;205483;205484;205485;205486;205487 164041;164042;164043;164044;164045;164046;164047;164048;164049;164050;164051;164052;164053;164054;164055;164056 164045 6 ILTTNTWSSELSK Unmodified 1478.7617 0.76167379 425 O60701 UGDH UDP-glucose 6-dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.12 3.89 3 1 4 1 2 1 1 1 1 1 73.106 69.91 2 1.0377E-46 88094 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 195.27 131.45 1289600000 253670000 964330000 38155000 0 0 0 0 0 0 0 0 0 0 11216000 22214000 24403 425 22300 205488;205489;205490;205491;205492;205493;205494;205495 164057;164058;164059;164060;164061;164062;164063;164064;164065;164066 164058 10 ILTTSEDSNAQEIK Unmodified 1547.7679 0.76788138 4427 Q9H6V9 C2orf43 UPF0554 protein C2orf43 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 38.375 38.15 2 2.5875E-26 41880 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 183.33 133.21 184330000 0 25161000 0 9677800 12529000 9734600 11348000 14909000 10185000 15904000 17437000 21197000 11944000 11234000 13067000 24404 4427 22301 205496;205497;205498;205499;205500;205501;205502;205503;205504;205505;205506;205507;205508 164067;164068;164069;164070;164071;164072;164073;164074;164075;164076;164077;164078;164079;164080 164077 13 ILTYYGAQK Unmodified 1055.5651 0.56514624 3006 Q6ZRS2 SRCAP Helicase SRCAP yes yes 0 0 0 By MS/MS 2 0 1 1 48.777 40.951 2 0.0065737 56638 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.21 74.636 10589000 10589000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24405 3006 22302 205509 164081 164081 1 ILVALCGGN Unmodified 915.48479 0.48478743 773 P04083 ANXA1 Annexin A1 yes yes 0 0 0 By MS/MS By MS/MS 2 0.816 1 1 1 2 1 82.793 80.955 2 0.0064061 84300 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.8 82.668 928600000 201140000 727460000 0 0 0 0 0 0 0 0 0 0 0 0 0 24406 773 22303 205510;205511;205512 164082;164083;164084 164083 2 ILVATNLFGR Unmodified 1102.6499 0.64987892 2347;118 O00148;Q13838 DDX39A;DDX39B ATP-dependent RNA helicase DDX39A;Spliceosome RNA helicase DDX39B no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.387 81.448 2 1.9919E-20 94246 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 190.08 108.79 1633700000 0 0 0 47976000 46471000 246130000 86894000 79697000 75626000 216880000 155900000 166350000 83745000 109740000 318290000 24407 118;2347 22304 205513;205514;205515;205516;205517;205518;205519;205520;205521;205522;205523;205524 164085;164086;164087;164088;164089;164090;164091;164092;164093;164094;164095;164096;164097 164095 12 ILVDALQK Unmodified 898.54877 0.54876789 539 O75787 ATP6AP2 Renin receptor yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 54.394 54.531 2 0.014742 60865 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 69.998 34.505 170080000 0 0 0 12046000 12942000 11482000 16128000 16422000 9772400 13364000 18341000 17104000 15278000 11961000 15242000 24408 539 22305 205525;205526;205527;205528;205529;205530;205531;205532;205533;205534;205535;205536 164098;164099;164100;164101;164102 164102 5 ILVDISNNLK Unmodified 1127.655 0.65502388 2851 Q687X5 STEAP4 Metalloreductase STEAP4 yes yes 0 0 0 By matching By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 71.004 71.074 2 0.046994 80841 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 60.436 22.878 6901900 0 0 0 0 930570 0 1184500 0 0 1613900 0 1656800 0 1516100 0 24409 2851 22306 205537;205538;205539;205540;205541 164103 164103 0 ILVDLLK Unmodified 812.53714 0.53714057 2910 Q6NZ67;Q6P582 MZT2B;MZT2A Mitotic-spindle organizing protein 2B;Mitotic-spindle organizing protein 2A yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 79.763 78.878 2 0.025177 91229 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 81.297 2.6812 221470000 96578000 0 0 8718600 13297000 14476000 15333000 16337000 12807000 0 19956000 23968000 0 0 0 24410 2910 22307 205542;205543;205544;205545;205546;205547;205548;205549;205550 164104;164105;164106;164107;164108;164109;164110;164111;164112 164110 9 ILVDLPSR Unmodified 911.54402 0.54401687 3287 Q8IYT4 KATNAL2 Katanin p60 ATPase-containing subunit A-like 2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 51.279 51.441 2 0.02755 57824 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 57.281 0.73411 49305000 0 0 0 0 0 0 0 0 18419000 30886000 0 0 0 0 0 24411 3287 22308 205551;205552 164113;164114 164114 2 ILVDNLCDMEMVNK 2 Oxidation (M) 1724.7783 0.77832819 232 O14974 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes yes 0 2 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 61.834 61.75 2 0.0002687 70930 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 63.283 56.155 11543000 0 0 0 0 3458400 0 3966300 0 0 4118700 0 0 0 0 0 24412 232 22309 205553;205554;205555 164115;164116;164117 164117 307;308 3 ILVDYDEK Unmodified 993.50188 0.50187728 1323 P32754 HPD 4-hydroxyphenylpyruvate dioxygenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 6.68 3.91 1 5 2 11 3 4 1 1 1 1 1 1 1 1 1 1 1 1 44.982 42.98 2 0.0024282 55208 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.25 41.451 6041900000 290490000 5176900000 96416000 8349100 11182000 0 11460000 13622000 4895700 17598000 97986000 89189000 11541000 61431000 150860000 24413 1323 22310 205556;205557;205558;205559;205560;205561;205562;205563;205564;205565;205566;205567;205568;205569;205570;205571;205572;205573;205574 164118;164119;164120;164121;164122;164123;164124;164125;164126;164127;164128;164129;164130;164131;164132;164133;164134;164135;164136;164137;164138;164139;164140 164123 21 ILVEDELSSPVVVFR Unmodified 1700.9349 0.93488713 2940 Q6P996;Q6P474 PDXDC1;PDXDC2P Pyridoxal-dependent decarboxylase domain-containing protein 1;Putative pyridoxal-dependent decarboxylase domain-containing protein 2 yes no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 89.439 89.59 2 3.281E-05 103730 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.653 75.963 13615000 0 0 0 0 0 0 0 0 884420 3424900 1629900 0 0 1838800 5836800 24414 2940 22311 205575;205576;205577;205578;205579 164141;164142;164143;164144 164142 4 ILVEFVVDSQK Unmodified 1275.7075 0.70745338 629 O95229 ZWINT ZW10 interactor yes yes 0 0 0 By MS/MS 2 0 1 1 85.963 77.833 2 0.04441 101576 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.108 34.847 5280100 5280100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24415 629 22312 205580 164145 164145 1 ILVENPSAR Unmodified 997.55564 0.55564418 210 O14757 CHEK1 Serine/threonine-protein kinase Chk1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 35.448 35.559 2 0.012914 39107 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 60.59 8.7354 113950000 0 0 0 7379000 8003800 11071000 8879600 10874000 10461000 14749000 14128000 0 0 9880400 18530000 24416 210 22313 205581;205582;205583;205584;205585;205586;205587;205588;205589;205590 164146;164147;164148;164149;164150;164151;164152;164153 164148 8 ILVGSLEK Unmodified 857.52222 0.52221879 1644 P51003;Q9NRJ5 PAPOLA;PAPOLB Poly(A) polymerase alpha;Poly(A) polymerase beta yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 48.299 48.461 2 0.026168 54597 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 58.119 15.645 70180000 0 0 0 3739700 3075900 9258800 6512700 4206800 0 6685600 6418300 6967400 5590900 7430700 10293000 24417 1644 22314 205591;205592;205593;205594;205595;205596;205597;205598;205599;205600;205601 164154 164154 1 ILVGTNLVR Unmodified 983.61277 0.61276513 3961 Q96QK1 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 63.833 63.996 2 0.0096665 73114 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 66.073 8.8956 288940000 0 0 0 0 14824000 16899000 19887000 17049000 10137000 18732000 43214000 29532000 15643000 30494000 72524000 24418 3961 22315 205602;205603;205604;205605;205606;205607;205608;205609;205610;205611;205612 164155;164156;164157;164158;164159;164160;164161;164162 164157 8 ILVIGLSR Unmodified 869.56984 0.56983769 3315 Q8N201 INTS1 Integrator complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 72.827 72.88 2 0.030197 84060 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 55.676 15.573 49030000 0 0 0 2706900 2960500 5767600 2394500 3092000 3873800 5443300 0 8145000 4701900 4105900 5838600 24419 3315 22316 205613;205614;205615;205616;205617;205618;205619;205620;205621;205622;205623 164163;164164;164165;164166;164167 164163 5 ILVLDDTNHERER Unmodified 1608.822 0.82198264 888 P09543 CNP 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 1 2 1 2 2 2 2 1 2 1 2 39.051 39.271 3;4 0.00048018 43325 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 70.412 51.088 263090000 0 0 0 11962000 8214900 27589000 9985800 21072000 22804000 23452000 26998000 25063000 26745000 10107000 49093000 24420 888 22317 205624;205625;205626;205627;205628;205629;205630;205631;205632;205633;205634;205635;205636;205637;205638;205639;205640;205641;205642 164168;164169;164170;164171;164172;164173;164174;164175;164176;164177;164178;164179 164173 8 ILVNDGDASK Unmodified 1030.5295 0.52948901 2989 Q6W2J9 BCOR BCL-6 corepressor yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.931 24.136 2 0.0065119 25884 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 64.711 36.289 95605000 0 0 0 5766500 4862500 8541500 5219800 5530500 4929900 8249800 9797500 11212000 9600600 7650200 14244000 24421 2989 22318 205643;205644;205645;205646;205647;205648;205649;205650;205651;205652;205653;205654 164180;164181;164182;164183;164184;164185;164186;164187 164180 8 ILVNHQSFPNEENDVDK Unmodified 1996.949 0.94903365 2337 Q13637 RAB32 Ras-related protein Rab-32 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.23 3.24 2 1 10 1 1 1 1 1 1 1 1 1 1 1 1 1 51.25 50.019 3 5.4856E-25 55922 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 78.501 68.939 184760000 14545000 8216800 25137000 7279200 8717500 18362000 8954000 15520000 9621800 0 14571000 36413000 8337800 9089700 0 24422 2337 22319 205655;205656;205657;205658;205659;205660;205661;205662;205663;205664;205665;205666;205667 164188;164189;164190;164191;164192;164193;164194;164195;164196;164197;164198;164199;164200 164199 13 ILVPIQQVLK Unmodified 1149.7485 0.74853033 1550 P48723 HSPA13 Heat shock 70 kDa protein 13 yes yes 0 0 0 By MS/MS 2 0 1 1 91.304 83.173 2 0.01335 107906 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.451 67.94 12637000 12637000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24423 1550 22320 205668 164201 164201 1 ILVSLIEVAQK Unmodified 1211.7489 0.74892426 4129 Q9BSL1 UBAC1 Ubiquitin-associated domain-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 89.959 81.828 2 0.035871 106236 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.56 24.8 17847000 17847000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24424 4129 22321 205669 164202 164202 1 ILVTGGSGLVGK Unmodified 1099.6601 0.66010926 2335 Q13630 TSTA3 GDP-L-fucose synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.57 3.96 3 4 1 1 1 1 1 1 1 58.817 56.509 2 0.002644 62947 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.558 36.386 114980000 15809000 15067000 1522500 0 0 0 0 0 0 0 23736000 16331000 0 8549600 33969000 24425 2335 22322 205670;205671;205672;205673;205674;205675;205676 164203;164204;164205;164206 164203 4 ILVTSNDSR Unmodified 1003.5298 0.52982336 2734 Q5JSH3 WDR44 WD repeat-containing protein 44 yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 22.61 22.844 2 0.019448 23377 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 53.968 15.162 84170000 0 0 0 4356400 3560400 0 4105800 4131400 0 6665800 13538000 12591000 5861200 10099000 19262000 24426 2734 22323 205677;205678;205679;205680;205681;205682;205683;205684;205685;205686 164207;164208;164209 164209 2 ILVVGATNRPQEIDEAAR Unmodified 1951.0487 0.048688112 2956 Q6PIW4 FIGNL1 Fidgetin-like protein 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 59.428 59.687 3 0.00026516 67983 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 55.864 30.545 44479000 0 0 0 0 0 6166900 4807200 3621500 3158600 5729400 5187900 6181200 3413700 0 6212700 24427 2956 22324 205687;205688;205689;205690;205691;205692;205693;205694;205695;205696 164210;164211;164212;164213;164214;164215;164216;164217;164218 164215 9 ILYDFTAR Unmodified 997.52328 0.52328142 4423 Q9H6S3 EPS8L2 Epidermal growth factor receptor kinase substrate 8-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.801 64.889 2 0.019608 75121 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 63.48 26.459 122030000 0 0 0 6334400 4148800 14456000 11471000 6733200 5705700 13822000 11609000 11497000 8318000 9532400 18400000 24428 4423 22325 205697;205698;205699;205700;205701;205702;205703;205704;205705;205706;205707;205708 164219;164220;164221;164222;164223;164224;164225;164226 164225 8 ILYDLHSEVQTLK Unmodified 1557.8403 0.84025847 3256 Q8IX90 SKA3 Spindle and kinetochore-associated protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 70.706 70.905 3 0.010449 81698 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 39.561 26.766 29769000 0 0 0 0 0 3355800 0 0 2338300 3300400 3091100 4549200 2449200 3934500 6750700 24429 3256 22326 205709;205710;205711;205712;205713;205714;205715;205716 164227;164228;164229;164230 164227 4 ILYDSMQLDIK Oxidation (M) 1353.685 0.68500338 5395 yes yes 0 1 0 By MS/MS 2 0 1 1 28.18 25.074 3 0.0063958 31765 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 54.471 17.489 + 27987000 0 0 27987000 0 0 0 0 0 0 0 0 0 0 0 0 24430 5395 22327 205717 164231 164231 6767 1 ILYIVASDPYSR Unmodified 1395.7398 0.73981614 5004 Q9ULT8 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.003 77.065 2 0.0025099 88481 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.162 53.215 58028000 0 0 0 2000100 1913100 5059300 4261000 3387600 3721100 6926800 4848000 6888400 3632200 4759100 10631000 24431 5004 22328 205718;205719;205720;205721;205722;205723;205724;205725;205726;205727;205728;205729 164232;164233;164234;164235;164236;164237;164238;164239;164240;164241;164242 164235 11 ILYLTPEQEK Unmodified 1232.6653 0.66525421 1902 P62495 ETF1 Eukaryotic peptide chain release factor subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 61.255 59.918 2 6.4951E-11 73744 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 163.99 163.99 3894500000 109640000 2469600000 59044000 68641000 64950000 130820000 86229000 77989000 72028000 120090000 120880000 140230000 93489000 94326000 186530000 24432 1902 22329 205730;205731;205732;205733;205734;205735;205736;205737;205738;205739;205740;205741;205742;205743;205744;205745 164243;164244;164245;164246;164247;164248;164249;164250;164251;164252;164253;164254;164255;164256;164257;164258;164259;164260;164261 164251 19 ILYNSLNDSFK Unmodified 1312.6663 0.66631685 3343 Q8N5C6 SRBD1 S1 RNA-binding domain-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 74.172 69.017 2 0.0050692 86668 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.572 38.761 16097000 0 16097000 0 0 0 0 0 0 0 0 0 0 0 0 0 24433 3343 22330 205746 164262 164262 1 ILYSQCGDVMR Oxidation (M) 1356.6166 0.61660624 1813;1004 P60660;P14649 MYL6;MYL6B Myosin light polypeptide 6;Myosin light chain 6B no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 38.169 37.943 2 1.2963E-08 42093 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 136.57 123.78 1785200000 0 31105000 0 91092000 143620000 114970000 142340000 159330000 82452000 142330000 165530000 305690000 180430000 96146000 130190000 24434 1813;1004 22331 205747;205748;205749;205750;205751;205752;205753;205754;205755;205756;205757;205758;205759 164263;164264;164265;164266;164267;164268;164269;164270;164271;164272;164273;164274;164275;164276;164277;164278 164274 1370 15 ILYSQCGDVMR Unmodified 1340.6217 0.62169161 1813;1004 P60660;P14649 MYL6;MYL6B Myosin light polypeptide 6;Myosin light chain 6B no no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 51.078 50.77 2 5.501E-11 57390 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 152.34 140.83 2755600000 0 59645000 0 164450000 171610000 169690000 174090000 190250000 121070000 215910000 255720000 385990000 221480000 182590000 443110000 24435 1813;1004 22331 205760;205761;205762;205763;205764;205765;205766;205767;205768;205769;205770;205771;205772 164279;164280;164281;164282;164283;164284;164285;164286;164287;164288;164289;164290;164291;164292 164281 14 ILYSQCGDVMRALGQNPTNAEVLK Unmodified 2676.3364 0.33635564 1813;1004 P60660;P14649 MYL6;MYL6B Myosin light polypeptide 6;Myosin light chain 6B no no 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 86.423 79.971 3 9.9066E-110 102100 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 166.27 146.19 78728000 45836000 32891000 0 0 0 0 0 0 0 0 0 0 0 0 0 24436 1813;1004 22332 205773;205774 164293;164294;164295 164295 3 IMADNPSWDGEK Oxidation (M) 1377.5871 0.58708025 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 1 1 6 2 1 1 1 1 1 1 40.027 38.664 2 8.6197E-13 48446 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.76 120.87 114940000 0 76763000 0 0 0 0 0 0 0 8451800 11000000 0 10415000 0 8310800 24437 2930 22333 205775;205776;205777;205778;205779;205780;205781;205782 164296;164297;164298;164299;164300;164301;164302;164303;164304 164298 4557 9 IMADNPSWDGEK Unmodified 1361.5922 0.59216562 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 7 3.69 1 1 3 2 1 1 1 47.688 45.796 2 5.9583E-13 57905 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 152.07 140.58 235060000 0 158670000 0 0 0 0 0 0 0 26475000 0 0 0 19868000 30045000 24438 2930 22333 205783;205784;205785;205786;205787 164305;164306;164307;164308 164306 4 IMAQMSALQK Unmodified 1119.578 0.57803589 3246 Q8IWV7 UBR1 E3 ubiquitin-protein ligase UBR1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 56.846 49.849 2 0.00063111 64982 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.98 92.048 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24439 3246 22334 205788;205789 164309;164310 164309 2 IMASFGNFANDNEIK Oxidation (M) 1685.7719 0.7719209 1469 P42858 HTT Huntingtin yes yes 0 1 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 76.44 72.714 2 2.5377E-15 90917 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.61 93.322 30651000 0 27862000 2788600 0 0 0 0 0 0 0 0 0 0 0 0 24440 1469 22335 205790;205791;205792 164311;164312;164313 164311 2306 3 IMATPEQVGK Oxidation (M) 1088.5536 0.55359527 973 P12956 XRCC6 X-ray repair cross-complementing protein 6 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.71 3.9 2 7 4 18 5 7 1 2 2 2 2 1 2 1 1 2 1 1 1 31.82 30.634 2 1.9815E-06 31998 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 149.65 131.62 2279300000 146290000 1509600000 21514000 54682000 51975000 67127000 68499000 19783000 57307000 29477000 31046000 108590000 28135000 33677000 51536000 24441 973 22336 205793;205794;205795;205796;205797;205798;205799;205800;205801;205802;205803;205804;205805;205806;205807;205808;205809;205810;205811;205812;205813;205814;205815;205816;205817;205818;205819;205820;205821;205822;205823 164314;164315;164316;164317;164318;164319;164320;164321;164322;164323;164324;164325;164326;164327;164328;164329;164330;164331;164332;164333;164334;164335;164336;164337;164338;164339;164340;164341;164342;164343;164344;164345;164346;164347;164348;164349;164350;164351;164352;164353 164323 1290 36 IMATPEQVGK Unmodified 1072.5587 0.55868065 973 P12956 XRCC6 X-ray repair cross-complementing protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 35.982 34.767 2 1.0531E-09 38733 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 146.58 129.81 4249300000 124860000 2842000000 25257000 85726000 55431000 121090000 63135000 77790000 66098000 116700000 159570000 0 151010000 115170000 245510000 24442 973 22336 205824;205825;205826;205827;205828;205829;205830;205831;205832;205833;205834;205835;205836;205837;205838 164354;164355;164356;164357;164358;164359;164360;164361;164362;164363;164364;164365;164366;164367;164368;164369;164370;164371;164372;164373;164374;164375;164376;164377;164378;164379;164380;164381;164382 164374 28 IMATTIDNSR Unmodified 1120.5547 0.55465791 76 CON__P19012;P19012 KRT15 Keratin, type I cytoskeletal 15 yes no 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 24.022 23.796 2 0.010798 13131 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 55.37 4.6666 + 64064000 0 0 0 35036000 0 29027000 0 0 0 0 0 0 0 0 0 24443 76 22337 205839;205840 164383;164384 164383 1 IMDHVEESLCSAATPK Unmodified 1786.823 0.8229702 2959 Q6PJG6 BRAT1 BRCA1-associated ATM activator 1 yes yes 0 0 0 By MS/MS 2 0 1 1 65.878 59.961 2 1.0719E-41 76680 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 168.82 133.41 17721000 0 17721000 0 0 0 0 0 0 0 0 0 0 0 0 0 24444 2959 22338 205841 164385 164385 1 IMDHVEESLCSAATPK Oxidation (M) 1802.8179 0.81788482 2959 Q6PJG6 BRAT1 BRCA1-associated ATM activator 1 yes yes 0 1 0 By MS/MS 2 0 1 1 51.12 47.199 3 0.0023679 59166 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 49.188 44.204 12213000 0 0 12213000 0 0 0 0 0 0 0 0 0 0 0 0 24445 2959 22338 205842 164386 164386 4586 1 IMDLYGQPEPVK Oxidation (M) 1404.6959 0.69590241 4767 Q9NZH8 IL36G Interleukin-36 gamma yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 52.853 52.739 2 0.0015667 60435 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 63.283 53.052 11411000 0 0 0 6583900 0 0 0 0 0 0 4827500 0 0 0 0 24446 4767 22339 205843;205844 164387 164387 6136 1 IMDPEIALK Unmodified 1028.5576 0.55761802 4333 Q9H0L4 CSTF2T Cleavage stimulation factor subunit 2 tau variant yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 67.162 67.446 2 0.012702 76655 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.91 38.62 10581000 0 0 0 0 0 0 0 0 0 0 0 0 2628700 2582500 5370300 24447 4333 22340 205845;205846;205847 164388 164388 1 IMDPNIVGSEHYDVAR Oxidation (M) 1830.857 0.85704752 823 P06576 ATP5B ATP synthase subunit beta, mitochondrial yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 56.105 56.512 3 0.00033607 63334 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 53.169 50.252 14233000 0 0 0 0 0 0 0 0 0 0 0 0 0 7055400 7177700 24448 823 22341 205848;205849;205850 164389;164390;164391 164391 990 3 IMDQAANPQYVWDR Oxidation (M) 1721.7832 0.78315429 3094 Q7Z460 CLASP1 CLIP-associating protein 1 yes yes 0 1 0 By MS/MS By matching By MS/MS By matching 10 0 4 1 1 1 1 62.792 63.089 2 0.00013774 72203 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 80.979 64.347 12817000 0 0 0 0 0 0 0 2425300 0 4978900 0 0 0 0 5413300 24449 3094 22342 205851;205852;205853;205854 164392;164393 164393 4700 2 IMDQAANPQYVWDR Unmodified 1705.7882 0.78823967 3094 Q7Z460 CLASP1 CLIP-associating protein 1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 70.677 70.892 2 0.012716 81599 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 50.354 40.666 21476000 0 0 0 0 0 3776000 1426700 0 0 3622100 3029400 2869100 0 0 6752500 24450 3094 22342 205855;205856;205857;205858;205859;205860 164394;164395 164395 1 IMDRFNLPR Unmodified 1160.6124 0.61244756 295 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 59.768 59.948 3 0.036628 67378 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.276 40.112 42705000 0 0 0 0 1144000 4304000 1989400 3521500 1881300 2633500 3749100 5425700 0 3727900 14328000 24451 295 22343 205861;205862;205863;205864;205865;205866;205867;205868;205869;205870 164396;164397 164396 1 IMDRFNLPR Oxidation (M) 1176.6074 0.60736218 295 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes yes 0 1 1 By MS/MS 10 0 1 1 49.92 50.229 3 0.045005 56968 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 47.187 26.883 17416000 0 0 0 0 0 0 0 0 0 0 0 0 17416000 0 0 24452 295 22343 205871 164398 164398 0 IMEEFFR Unmodified 970.45824 0.45823833 2159 Q08499 PDE4D cAMP-specific 3',5'-cyclic phosphodiesterase 4D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 72.114 72.34 2 0.040686 82477 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.485 58.3 25875000 0 0 0 0 0 0 0 0 0 3507500 3327800 3504000 3489400 4743200 7303000 24453 2159 22344 205872;205873;205874;205875;205876;205877 164399 164399 1 IMEEQQK Unmodified 904.43242 0.43241751 2831 Q5VZE5 NAA35 N-alpha-acetyltransferase 35, NatC auxiliary subunit yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 7.7106 7.7555 2 0.024293 6234 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 99.384 64.183 15222000 0 0 0 601100 1384500 1553700 0 0 0 0 7246400 4436800 0 0 0 24454 2831 22345 205878;205879;205880;205881;205882 164400;164401 164401 2 IMEGIPTVELSGR Oxidation (M) 1416.7283 0.72826518 481 O75342 ALOX12B Arachidonate 12-lipoxygenase, 12R-type yes yes 0 1 0 By MS/MS 10 0 1 1 70.808 70.991 2 0.045326 81651 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 42.001 19.36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24455 481 22346 205883 164402 164402 1 IMEIVDAITTTAQSHQR Oxidation (M) 1928.9626 0.96257522 861 P08237 PFKM ATP-dependent 6-phosphofructokinase, muscle type yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 70.344 70.565 3 2.958E-14 80875 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 94.882 7.5943 93246000 0 0 0 0 0 16573000 0 0 0 22928000 0 26513000 0 0 27232000 24456 861 22347 205884;205885;205886;205887 164403;164404;164405;164406 164406 1088 4 IMEIVDAITTTAQSHQR Unmodified 1912.9677 0.9676606 861 P08237 PFKM ATP-dependent 6-phosphofructokinase, muscle type yes yes 0 0 0 By MS/MS 10 0 1 1 80.327 80.425 3 0.00023849 93031 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 50.387 0 4659600 0 0 0 0 0 0 0 0 0 4659600 0 0 0 0 0 24457 861 22347 205888 164407 164407 1 IMEMSAK Oxidation (M) 824.37721 0.37721081 1561 P49189 ALDH9A1 4-trimethylaminobutyraldehyde dehydrogenase yes yes 0 1 0 By MS/MS 2 0 2 2 11.703 8.4181 1;2 0.0094498 8666 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.91 56.862 94443000 0 94443000 0 0 0 0 0 0 0 0 0 0 0 0 0 24458 1561 22348 205889;205890 164408;164409 164409 2475 1 IMESGSELSK Oxidation (M) 1095.5118 0.51179004 3635 Q92600 RQCD1 Cell differentiation protein RCD1 homolog yes yes 0 1 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 1 1 2 1 1 2 1 2 2 17.323 17.538 2 0.0037549 16182 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.897 26.395 57458000 0 0 0 5362600 3199800 5364900 3157200 6407000 2968700 3731300 0 9750100 4406600 5901700 7208400 24459 3635 22349 205891;205892;205893;205894;205895;205896;205897;205898;205899;205900;205901;205902;205903;205904;205905 164410;164411;164412;164413;164414;164415;164416 164410 5140 7 IMETDPLQQGQALASALK Oxidation (M) 1928.9877 0.98772734 4674 Q9NVN8 GNL3L Guanine nucleotide-binding protein-like 3-like protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By matching 10 0 15 1 2 2 1 1 1 1 2 1 1 2 83.803 83.91 2;3 5.7681E-33 97104 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 121.28 105.14 90626000 0 0 0 0 4170300 10542000 5218200 4342900 8165100 8397100 8475000 19319000 4263800 5862600 11869000 24460 4674 22350 205906;205907;205908;205909;205910;205911;205912;205913;205914;205915;205916;205917;205918;205919;205920 164417;164418;164419;164420;164421;164422;164423 164417 6087 7 IMETDPLQQGQALASALK Unmodified 1912.9928 0.99281272 4674 Q9NVN8 GNL3L Guanine nucleotide-binding protein-like 3-like protein yes yes 0 0 0 By MS/MS 10 0 1 1 86.208 86.377 2 0.0036224 99857 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.621 39.317 4449000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4449000 24461 4674 22350 205921 164424 164424 1 IMEVIDAITTTAQSHQR Oxidation (M) 1928.9626 0.96257522 1063 P17858 PFKL ATP-dependent 6-phosphofructokinase, liver type yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 2 1 1 1 1 69.48 69.712 3 7.5618E-06 80204 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 71.697 7.8701 52286000 0 0 0 0 0 0 0 10410000 6535500 14186000 0 0 0 0 21154000 24462 1063 22351 205922;205923;205924;205925;205926;205927 164425;164426;164427;164428;164429;164430 164429 1494 5 IMEVIDAITTTAQSHQR Unmodified 1912.9677 0.9676606 1063 P17858 PFKL ATP-dependent 6-phosphofructokinase, liver type yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 80.443 80.591 3 3.7211E-14 92611 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.692 10.607 45283000 0 0 0 0 0 3744000 0 2346700 0 0 6023000 5858200 0 4423700 22888000 24463 1063 22351 205928;205929;205930;205931;205932;205933 164431;164432;164433;164434;164435 164431 5 IMEVPVIK Unmodified 927.54633 0.54632505 4455 Q9H8V3 ECT2 Protein ECT2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 68.89 69.013 2 0.039557 79019 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 50.632 50.632 20392000 0 0 0 0 1221800 0 2096800 2301800 0 2474300 4713200 2782800 2007800 2793900 0 24464 4455 22352 205934;205935;205936;205937;205938;205939;205940;205941 164436;164437;164438;164439 164439 4 IMEYYEK Oxidation (M) 990.43683 0.43683418 1375 P36543;Q96A05 ATP6V1E1;ATP6V1E2 V-type proton ATPase subunit E 1;V-type proton ATPase subunit E 2 yes no 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 27.125 23.444 2 0.020508 30762 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.45 78.339 57028000 0 56170000 858530 0 0 0 0 0 0 0 0 0 0 0 0 24465 1375 22353 205942;205943 164440 164440 1 IMFEVQDLK Oxidation (M) 1137.574 0.57399637 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 72.112 72.179 2 0.0080315 82341 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.679 39.293 91005000 0 0 0 5224300 6608200 9753100 6804800 14431000 4886500 11454000 7726400 9518400 0 7400700 7198100 24466 2392 22354 205944;205945;205946;205947;205948;205949;205950;205951;205952;205953;205954 164441;164442;164443;164444;164445;164446;164447;164448;164449;164450 164444 3907 9 IMGIPEEEQMGLLR 2 Oxidation (M) 1646.8008 0.80077819 1356 P35579 MYH9 Myosin-9 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 2 2 1 1 2 2 2 70.681 70.73 2;3 1.6598E-08 80148 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 95.573 86.141 2285900000 0 0 0 117780000 184560000 193320000 188630000 147590000 174150000 284770000 213160000 302860000 194370000 138250000 146480000 24467 1356 22355 205955;205956;205957;205958;205959;205960;205961;205962;205963;205964;205965;205966;205967;205968;205969;205970;205971;205972;205973;205974;205975;205976 164451;164452;164453;164454;164455;164456;164457;164458;164459;164460;164461;164462;164463;164464;164465;164466;164467;164468;164469 164461 2078;2079 18 IMGIPEEEQMGLLR Oxidation (M) 1630.8059 0.80586357 1356 P35579 MYH9 Myosin-9 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 1 2 1 2 1 2 2 2 2 2 2 78.886 78.976 2 1.6909E-16 91200 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 120.09 109.76 1095500000 0 0 0 17452000 24166000 89292000 35493000 91989000 41086000 129510000 129320000 177680000 77147000 100680000 181670000 24468 1356 22355 205977;205978;205979;205980;205981;205982;205983;205984;205985;205986;205987;205988;205989;205990;205991;205992;205993;205994;205995;205996 164470;164471;164472;164473;164474;164475;164476;164477;164478;164479;164480;164481;164482;164483;164484;164485;164486;164487;164488;164489 164476 2078;2079 17 IMGIPEEEQMGLLR Unmodified 1614.8109 0.81094895 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 84.407 84.516 2 8.9203E-14 97525 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 113.93 97.673 227680000 0 0 0 0 8199500 16641000 8168500 20365000 12437000 25361000 23272000 20642000 0 16632000 75957000 24469 1356 22355 205997;205998;205999;206000;206001;206002;206003;206004;206005;206006 164490;164491;164492;164493;164494;164495;164496;164497;164498;164499;164500;164501;164502;164503;164504 164494 15 IMGNLGAADIDHK Unmodified 1353.6711 0.67108465 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.65 3.65 5 12 1 2 2 1 1 1 1 1 1 1 1 1 1 1 1 50.763 49.249 2;3 8.1586E-07 55485 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 91.939 88.176 1151700000 24769000 158970000 47039000 30913000 32441000 71982000 43314000 48965000 79047000 68784000 75101000 102110000 74911000 106670000 186640000 24470 516 22356 206007;206008;206009;206010;206011;206012;206013;206014;206015;206016;206017;206018;206019;206020;206021;206022;206023 164505;164506;164507;164508;164509;164510;164511;164512;164513;164514;164515;164516;164517;164518;164519;164520;164521;164522;164523;164524 164505 19 IMGNLGAADIDHK Oxidation (M) 1369.666 0.66599927 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 1 0 By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS 8.47 3.07 2 1 12 1 1 1 1 2 1 1 1 2 1 1 2 38.27 37.385 2;3 0.0008393 41696 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 56.139 47.41 370790000 11349000 7902600 44934000 13701000 41003000 33741000 25564000 18744000 0 0 55686000 0 40854000 33569000 43739000 24471 516 22356 206024;206025;206026;206027;206028;206029;206030;206031;206032;206033;206034;206035;206036;206037;206038 164525;164526;164527;164528;164529;164530;164531 164530 668 4 IMGNLNLPK Unmodified 998.55829 0.55828672 669 O95571 ETHE1 Persulfide dioxygenase ETHE1, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 72.207 63.969 2 0.028004 84963 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.312 35.702 7523400 7523400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24472 669 22357 206039 164532 164532 1 IMGPNYTPGK Oxidation (M) 1092.5274 0.52738052 980 P13639 EEF2 Elongation factor 2 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 31.004 31.181 2 0.0026308 32379 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 74.464 52.333 271130000 0 0 0 8289300 12213000 16857000 12300000 0 12547000 14940000 42326000 36060000 0 27193000 88404000 24473 980 22358 206040;206041;206042;206043;206044;206045;206046;206047;206048;206049 164533;164534;164535;164536;164537;164538;164539;164540;164541;164542;164543;164544 164540 1310 11 IMGPNYTPGK Unmodified 1076.5325 0.5324659 980 P13639 EEF2 Elongation factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.641 38.821 2 0.0018227 42949 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 88.37 78.459 848720000 0 0 0 18519000 16024000 26636000 16954000 23565000 12556000 41685000 97323000 87908000 29117000 76725000 401710000 24474 980 22358 206050;206051;206052;206053;206054;206055;206056;206057;206058;206059;206060;206061 164545;164546;164547;164548;164549;164550;164551;164552;164553;164554;164555;164556 164552 11 IMGPNYTPGKK Unmodified 1204.6274 0.62742892 980 P13639 EEF2 Elongation factor 2 yes yes 0 0 1 By MS/MS By matching By matching By matching By matching By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 29.305 29.529 3 0.0039038 30848 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.598 28.197 122990000 0 0 0 0 3334500 2054400 5859400 0 1651700 7121000 14795000 19056000 0 0 69115000 24475 980 22359 206062;206063;206064;206065;206066;206067;206068;206069 164557 164557 1 IMGTSPLQIDRAEDR Unmodified 1700.8516 0.85156821 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 58.136 58.282 3 0.045998 65467 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 25.965 17.841 52274000 0 0 0 0 4023800 7106300 0 0 3536300 6409100 8058200 0 0 7796400 15343000 24476 1300 22360 206070;206071;206072;206073;206074;206075;206076 164558 164558 1 IMGVAGGLTNLSK Oxidation (M) 1275.6857 0.68567208 3579 Q8WWY3 PRPF31 U4/U6 small nuclear ribonucleoprotein Prp31 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 60.813 60.271 2 2.0178E-08 80379 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.39 81.66 152850000 11709000 0 0 8698200 8778000 10530000 9832200 10853000 8738700 13617000 15155000 13998000 13314000 9870000 17753000 24477 3579 22361 206077;206078;206079;206080;206081;206082;206083;206084;206085;206086;206087;206088;206089 164559;164560;164561;164562;164563;164564;164565;164566;164567;164568;164569;164570;164571;164572 164564 5073 13 IMGVAGGLTNLSK Unmodified 1259.6908 0.69075746 3579 Q8WWY3 PRPF31 U4/U6 small nuclear ribonucleoprotein Prp31 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72.833 71.97 2 7.0645E-05 92685 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 99.522 51.699 267440000 32572000 27129000 0 9582800 9898600 15424000 12618000 18214000 9002800 19201000 20795000 16019000 13924000 17925000 45137000 24478 3579 22361 206090;206091;206092;206093;206094;206095;206096;206097;206098;206099;206100;206101;206102;206103 164573;164574;164575;164576;164577;164578;164579;164580;164581;164582;164583;164584;164585;164586 164579 14 IMHFPTWVDLK Oxidation (M) 1401.7115 0.7114929 3608 Q92499 DDX1 ATP-dependent RNA helicase DDX1 yes yes 0 1 0 By MS/MS 2 0 1 1 86.693 78.562 3 0.0008673 102353 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.171 52.868 8702700 8702700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24479 3608 22362 206104 164587 164587 5101 1 IMISDFGLSK Oxidation (M) 1125.574 0.57399637 3214 Q8IU85;Q14012 CAMK1D;CAMK1 Calcium/calmodulin-dependent protein kinase type 1D;Calcium/calmodulin-dependent protein kinase type 1 yes no 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 76.556 75.531 2 0.0072278 87684 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 55.064 29.125 121670000 0 78844000 8798800 3006200 0 0 3631400 0 0 6402100 0 0 5225100 0 15765000 24480 3214 22363 206105;206106;206107;206108;206109;206110;206111;206112;206113 164588;164589;164590;164591;164592;164593 164593 4832 6 IMISDFGLSK Unmodified 1109.5791 0.57908174 3214 Q8IU85;Q14012 CAMK1D;CAMK1 Calcium/calmodulin-dependent protein kinase type 1D;Calcium/calmodulin-dependent protein kinase type 1 yes no 0 0 0 By MS/MS By matching 2 0 2 1 1 81.893 78.276 2 0.0025767 97219 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.19 59.378 40610000 0 37679000 2931200 0 0 0 0 0 0 0 0 0 0 0 0 24481 3214 22363 206114;206115 164594 164594 1 IMLAIITK Oxidation (M) 917.56198 0.56197512 1983;1982 P78415;P78414;P78412;Q9BZI1;P78413;P78411 IRX3;IRX1;IRX6;IRX2;IRX4;IRX5 Iroquois-class homeodomain protein IRX-3;Iroquois-class homeodomain protein IRX-1;Iroquois-class homeodomain protein IRX-6;Iroquois-class homeodomain protein IRX-2;Iroquois-class homeodomain protein IRX-4;Iroquois-class homeodomain protein IRX-5 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.395 70.47 2 0.015327 81069 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 60.478 28.123 88642000 0 0 0 4615000 5590300 6528300 8555000 5483200 8006500 8825300 9220000 10631000 7342900 5766200 8079000 24482 1983;1982 22364 206116;206117;206118;206119;206120;206121;206122;206123;206124;206125;206126;206127 164595;164596;164597;164598;164599;164600 164599 3205 6 IMLAIITK Unmodified 901.56706 0.56706049 1983;1982 P78415;P78414;P78412;Q9BZI1;P78413;P78411 IRX3;IRX1;IRX6;IRX2;IRX4;IRX5 Iroquois-class homeodomain protein IRX-3;Iroquois-class homeodomain protein IRX-1;Iroquois-class homeodomain protein IRX-6;Iroquois-class homeodomain protein IRX-2;Iroquois-class homeodomain protein IRX-4;Iroquois-class homeodomain protein IRX-5 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 77.267 77.332 2 0.032702 88934 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 54.157 38.659 53065000 0 0 0 2277700 2813200 0 4732800 4262300 3735100 4942600 8069600 8159100 0 4670200 9401900 24483 1983;1982 22364 206128;206129;206130;206131;206132;206133;206134;206135;206136;206137 164601;164602;164603;164604;164605;164606 164603 6 IMLDSSNLQHQK Unmodified 1412.7082 0.70819844 5110 Q9Y2L1 DIS3 Exosome complex exonuclease RRP44 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.71 5 11 2 1 2 1 1 1 1 1 1 1 1 1 1 1 41.976 40.319 2;3 5.3509E-31 56076 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 189.38 145.03 543590000 188670000 171580000 62335000 5573200 5613100 12673000 8003100 7478700 0 13498000 13804000 12577000 7765700 9881100 24136000 24484 5110 22365 206138;206139;206140;206141;206142;206143;206144;206145;206146;206147;206148;206149;206150;206151;206152;206153 164607;164608;164609;164610;164611;164612;164613;164614;164615;164616;164617;164618;164619;164620 164615 12 IMLDSSNLQHQK Oxidation (M) 1428.7031 0.70311306 5110 Q9Y2L1 DIS3 Exosome complex exonuclease RRP44 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 6.71 3.81 4 2 8 2 3 1 1 1 1 1 1 1 1 1 37.083 34.924 3 6.4025E-15 48252 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 141.1 119.7 327880000 123780000 93719000 51495000 0 2262600 10688000 6083600 0 3637600 11344000 11629000 0 9013100 4235100 0 24485 5110 22365 206154;206155;206156;206157;206158;206159;206160;206161;206162;206163;206164;206165;206166;206167 164621;164622;164623;164624;164625;164626;164627;164628 164626 6502 5 IMLFTNEDNPHGNDSAK Oxidation (M) 1917.8527 0.85269042 973 P12956 XRCC6 X-ray repair cross-complementing protein 6 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 49.27 49.364 3 1.5432E-10 55457 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 88.992 78.711 175540000 0 0 0 14518000 18619000 19433000 20575000 0 17222000 0 23322000 19870000 25962000 16021000 0 24486 973 22366 206168;206169;206170;206171;206172;206173;206174;206175;206176 164629;164630;164631;164632;164633;164634;164635;164636;164637;164638;164639;164640 164631 1291 11 IMLFTNEDNPHGNDSAK Unmodified 1901.8578 0.8577758 973 P12956 XRCC6 X-ray repair cross-complementing protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 55.342 55.613 3 6.5028E-07 62421 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 63.827 58.186 56467000 0 0 0 0 0 6729100 4438300 3731900 0 5395400 0 9339200 4189300 7260100 15384000 24487 973 22366 206177;206178;206179;206180;206181;206182;206183;206184 164641;164642 164642 2 IMLGDEAALLEQK Oxidation (M) 1445.7436 0.74358089 4200 Q9BW27 NUP85 Nuclear pore complex protein Nup85 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS 7 3.69 1 1 3 2 1 1 1 79.185 77.437 2 2.6794E-25 95246 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 157.38 134.85 111420000 0 72804000 0 6949000 10749000 0 0 0 0 0 0 0 20920000 0 0 24488 4200 22367 206185;206186;206187;206188;206189 164643;164644;164645 164643 5677 3 IMLGDEAALLEQK Unmodified 1429.7487 0.74866627 4200 Q9BW27 NUP85 Nuclear pore complex protein Nup85 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 81.297 80.456 2 2.6399E-26 99605 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 159.83 117.72 155800000 0 142300000 0 0 0 1955900 0 1622900 0 0 0 0 0 2906900 7015200 24489 4200 22367 206190;206191;206192;206193;206194 164646;164647 164646 2 IMLLDEFTTK Oxidation (M) 1225.6264 0.62642587 125 O00186 STXBP3 Syntaxin-binding protein 3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 81.443 80.703 2 0.0044722 93148 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 64.04 45.265 49963000 0 21407000 3233600 1654500 0 0 3164100 2844500 3484300 5897200 5322200 2955000 0 0 0 24490 125 22368 206195;206196;206197;206198;206199;206200;206201;206202;206203;206204 164648;164649;164650;164651;164652;164653 164648 163 6 IMLNEASGFEK Oxidation (M) 1253.5962 0.59618837 2097;913 Q03468;P0DP91 ERCC6 DNA excision repair protein ERCC-6 no no 0 1 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 8.12 3.26 1 1 6 2 1 1 1 1 1 1 55.105 53.74 2 1.1812E-05 68292 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.67 94.714 82368000 0 39707000 0 0 0 10494000 5383600 0 8414600 9645000 0 8723500 0 0 0 24491 2097;913 22369 206205;206206;206207;206208;206209;206210;206211;206212 164654;164655;164656;164657 164654 1178 4 IMLNEASGFEK Unmodified 1237.6013 0.60127375 2097;913 Q03468;P0DP91 ERCC6 DNA excision repair protein ERCC-6 no no 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 60.533 59.931 2 0.014163 69143 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 61.65 33.768 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24492 2097;913 22369 206213;206214 164658;164659 164658 2 IMLNTPEDVQALVSGK Oxidation (M) 1729.892 0.89203604 129 O00231 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.7 2.85 2 2 19 3 1 2 2 2 1 1 2 2 1 2 2 2 84.159 83.64 2;3 5.8244E-52 96908 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 171.32 123.23 1408100000 0 831360000 12362000 0 34149000 34104000 20567000 9937800 9993100 146330000 135660000 70757000 14305000 26755000 61777000 24493 129 22370 206215;206216;206217;206218;206219;206220;206221;206222;206223;206224;206225;206226;206227;206228;206229;206230;206231;206232;206233;206234;206235;206236;206237 164660;164661;164662;164663;164664;164665;164666;164667;164668;164669;164670;164671;164672;164673;164674;164675;164676;164677;164678 164661 170 18 IMLNTPEDVQALVSGK Unmodified 1713.8971 0.89712142 129 O00231 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 6.1 3.91 4 1 5 1 3 1 1 1 1 1 1 87.801 85.509 2 3.9038E-39 106317 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 183.37 175.3 1254700000 5616400 1203100000 3433500 0 0 0 0 0 0 11663000 8457500 0 1924600 2952300 17559000 24494 129 22370 206238;206239;206240;206241;206242;206243;206244;206245;206246;206247 164679;164680;164681;164682;164683;164684;164685;164686;164687;164688;164689 164680 8 IMLPGVLR Oxidation (M) 913.54191 0.54190838 436 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 75.154 75.22 2 0.011651 86058 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.263 65.263 29125000 0 0 0 0 2738600 2547600 0 4083700 0 5565900 0 0 3153700 3469400 7566100 24495 436 22371 206248;206249;206250;206251;206252;206253;206254 164690;164691;164692;164693;164694;164695;164696 164692 559 7 IMLPWDPTGK Unmodified 1156.5951 0.59506616 1156 P23396 RPS3 40S ribosomal protein S3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85.744 84.768 2 0.0014227 98193 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 106.6 97.242 808950000 153240000 345470000 5075100 6209100 10115000 16465000 8619200 22995000 8896000 21705000 27688000 28191000 20624000 33815000 99840000 24496 1156 22372 206255;206256;206257;206258;206259;206260;206261;206262;206263;206264;206265;206266;206267;206268;206269 164697;164698;164699;164700;164701;164702;164703;164704;164705;164706;164707;164708;164709;164710;164711;164712;164713;164714 164702 17 IMLPWDPTGK Oxidation (M) 1172.59 0.58998078 1156 P23396 RPS3 40S ribosomal protein S3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 82.398 81.283 2 0.0015401 94594 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 84.615 72.087 820090000 123190000 202490000 10847000 18148000 24862000 32774000 19475000 24507000 20463000 58344000 49570000 55695000 43780000 54975000 80967000 24497 1156 22372 206270;206271;206272;206273;206274;206275;206276;206277;206278;206279;206280;206281;206282;206283;206284;206285 164715;164716;164717;164718;164719;164720;164721;164722;164723;164724;164725;164726;164727;164728;164729 164716 1672 8 IMMEFER 2 Oxidation (M) 986.42014 0.42013826 348 O43633 CHMP2A Charged multivesicular body protein 2a yes yes 0 2 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 14 2 1 2 1 2 1 1 1 2 1 27.005 27.137 2 0.028275 29376 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 46.426 34.521 64419000 0 0 0 9247100 5312700 9260200 6017400 7291500 4123000 3753800 0 6544800 0 5552500 7315700 24498 348 22373 206286;206287;206288;206289;206290;206291;206292;206293;206294;206295;206296;206297;206298;206299 164730;164731;164732;164733 164731 4 IMNGEADAMSLDGGFVYIAGK 2 Oxidation (M) 2189.9973 0.99730575 763 P02787 TF Serotransferrin yes yes 0 2 0 By MS/MS 10 0 1 1 80.767 80.956 2 6.0234E-09 93613 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 71.241 48.362 2458100 0 0 0 0 0 0 0 2458100 0 0 0 0 0 0 0 24499 763 22374 206300 164734 164734 916;917 1 IMNGGIGGGPPPAK Unmodified 1264.6598 0.65979168 2879 Q6GQQ9 OTUD7B OTU domain-containing protein 7B yes yes 0 0 0 By MS/MS 2 0 1 1 43.415 38.267 2 0.0014299 49560 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.908 53.669 12344000 0 12344000 0 0 0 0 0 0 0 0 0 0 0 0 0 24500 2879 22375 206301 164735 164735 1 IMNGGIGGGPPPAK Oxidation (M) 1280.6547 0.6547063 2879 Q6GQQ9 OTUD7B OTU domain-containing protein 7B yes yes 0 1 0 By MS/MS 2 0 1 1 32.68 28.145 2 0.0020515 36830 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.148 44.34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24501 2879 22375 206302 164736 164736 4519 1 IMNTFSVMPSPK Unmodified 1350.6676 0.66757917 4160;4182;2350 Q13885;Q9BVA1;Q9BUF5 TUBB2A;TUBB2B;TUBB6 Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-6 chain no no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.665 74.73 2 1.0168E-19 86101 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 158.79 130.06 415970000 0 0 0 15168000 20555000 30096000 19841000 28357000 18497000 27429000 41613000 47710000 27772000 36573000 102360000 24502 2350;4182;4160 22376 206303;206304;206305;206306;206307;206308;206309;206310;206311;206312;206313;206314 164737;164738;164739;164740;164741;164742;164743;164744;164745;164746;164747 164741 7 IMNTFSVMPSPK 2 Oxidation (M) 1382.6574 0.65740842 4160;4182;2350 Q13885;Q9BVA1;Q9BUF5 TUBB2A;TUBB2B;TUBB6 Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-6 chain no no 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 50.374 50.459 2 0.014192 56269 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 45.307 17.571 12498000000 0 0 0 1133700000 958820000 0 912180000 938350000 0 2246100000 2555200000 0 1921100000 0 1833000000 24503 2350;4182;4160 22376 206315;206316;206317;206318;206319;206320;206321;206322 164748 164748 3838;3839 0 IMNTFSVVPSPK Oxidation (M) 1334.6904 0.69042311 1963;842;2306 P07437;P68371;Q13509 TUBB;TUBB4B;TUBB3 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-3 chain no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.7 1.51 3 78 1 1 1 6 7 7 5 8 8 7 7 4 7 6 6 69.818 69.896 2 8.0511E-11 74785 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 146.11 111.39 18925000000 1894800 1159100 754790 1129000000 1135300000 1372300000 1474800000 1172500000 1339700000 1870400000 1741600000 2266400000 1934900000 1584700000 1899200000 24504 842;1963;2306 22377 206323;206324;206325;206326;206327;206328;206329;206330;206331;206332;206333;206334;206335;206336;206337;206338;206339;206340;206341;206342;206343;206344;206345;206346;206347;206348;206349;206350;206351;206352;206353;206354;206355;206356;206357;206358;206359;206360;206361;206362;206363;206364;206365;206366;206367;206368;206369;206370;206371;206372;206373;206374;206375;206376;206377;206378;206379;206380;206381;206382;206383;206384;206385;206386;206387;206388;206389;206390;206391;206392;206393;206394;206395;206396;206397;206398;206399;206400;206401;206402;206403 164749;164750;164751;164752;164753;164754;164755;164756;164757;164758;164759;164760;164761;164762;164763;164764;164765;164766;164767;164768;164769;164770;164771;164772;164773;164774;164775;164776;164777;164778;164779;164780;164781;164782;164783;164784;164785;164786;164787;164788;164789;164790;164791;164792;164793;164794;164795;164796;164797;164798;164799;164800;164801;164802;164803;164804;164805;164806;164807;164808;164809;164810;164811;164812;164813;164814;164815;164816;164817;164818;164819;164820;164821;164822;164823;164824;164825;164826;164827;164828;164829;164830;164831;164832;164833;164834;164835;164836;164837;164838;164839;164840;164841;164842;164843;164844 164836 1038;3769 88 IMNTFSVVPSPK Unmodified 1318.6955 0.69550848 1963;842;2306 P07437;P68371;Q13509 TUBB;TUBB4B;TUBB3 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-3 chain no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 29 3 3 3 2 2 1 2 2 3 3 2 3 74.147 74.184 2;3 3.0772E-23 85072 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 158.79 124.92 24505000000 0 0 0 1097400000 1208300000 2379100000 1255700000 1698700000 1199300000 2209300000 2371300000 2508800000 2074500000 2402200000 4100800000 24505 842;1963;2306 22377 206404;206405;206406;206407;206408;206409;206410;206411;206412;206413;206414;206415;206416;206417;206418;206419;206420;206421;206422;206423;206424;206425;206426;206427;206428;206429;206430;206431;206432 164845;164846;164847;164848;164849;164850;164851;164852;164853;164854;164855;164856;164857;164858;164859;164860;164861;164862;164863;164864;164865;164866;164867;164868;164869 164862 21 IMNVIGEPIDERGPIK Unmodified 1779.9553 0.955305 823 P06576 ATP5B ATP synthase subunit beta, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 72.928 73.205 3 0.0031647 83834 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.913 30.767 30676000 0 0 0 0 0 0 0 6051700 0 0 0 0 0 0 24625000 24506 823 22378 206433;206434 164870;164871 164870 2 IMPASTFDMDK Oxidation (M) 1270.5574 0.55736002 3331 Q8N4J0 C9orf41 UPF0586 protein C9orf41 yes yes 0 1 0 By MS/MS 2 0 1 1 53.193 47.401 2 0.014119 61453 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 61.78 21.056 35850000 0 35850000 0 0 0 0 0 0 0 0 0 0 0 0 0 24507 3331 22379 206435 164872;164873 164873 4924 2 IMPASTFDMDK Unmodified 1254.5624 0.5624454 3331 Q8N4J0 C9orf41 UPF0586 protein C9orf41 yes yes 0 0 0 By MS/MS 2 0 1 1 67.276 61.36 2 0.0049301 78360 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.108 80.079 41993000 0 41993000 0 0 0 0 0 0 0 0 0 0 0 0 0 24508 3331 22379 206436 164874;164875 164874 2 IMPEEEYSEFK Unmodified 1400.617 0.61698339 1116 P20936 RASA1 Ras GTPase-activating protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 66.818 60.902 2 4.7941E-09 77807 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.38 109.08 64635000 0 64635000 0 0 0 0 0 0 0 0 0 0 0 0 0 24509 1116 22380 206437 164876 164876 1 IMPLPAGGPSISQGLPASR Oxidation (M) 1863.9877 0.98766776 488 O75376 NCOR1 Nuclear receptor corepressor 1 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 2 2 1 1 1 1 1 1 1 1 1 75.776 75.767 2;3 5.2199E-24 87069 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 100.55 86.394 137000000 0 0 0 13028000 17491000 0 9830900 9134200 6843200 16735000 9438300 18958000 11708000 12038000 11798000 24510 488 22381 206438;206439;206440;206441;206442;206443;206444;206445;206446;206447;206448;206449;206450 164877;164878;164879;164880;164881;164882;164883;164884;164885;164886;164887;164888;164889 164879 632 13 IMPLPAGGPSISQGLPASR Unmodified 1847.9928 0.99275314 488 O75376 NCOR1 Nuclear receptor corepressor 1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 2 1 1 1 1 2 2 80.605 80.713 2;3 2.029E-15 93046 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.61 93.451 84711000 0 0 0 3094000 0 0 2576900 4498700 3177700 7891000 6061200 7884000 4980500 10880000 33667000 24511 488 22381 206451;206452;206453;206454;206455;206456;206457;206458;206459;206460;206461;206462;206463 164890;164891;164892;164893;164894;164895;164896;164897;164898;164899 164893 9 IMQDFESDTFFPEIDLEK Oxidation (M) 2218.998 0.99801725 722 P00374 DHFR Dihydrofolate reductase yes yes 0 1 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 94.563 91.045 2 2.3375E-15 112943 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.35 99.933 60409000 0 56819000 3589400 0 0 0 0 0 0 0 0 0 0 0 0 24512 722 22382 206464;206465;206466 164900;164901;164902;164903 164901 870 4 IMQDFESDTFFPEIDLEK Unmodified 2203.0031 0.003102632 722 P00374 DHFR Dihydrofolate reductase yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 96.261 92.984 2 9.0823E-37 114758 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 173.44 161.46 2646000 0 2646000 0 0 0 0 0 0 0 0 0 0 0 0 0 24513 722 22382 206467;206468 164904;164905 164904 2 IMQEEGQPLK Unmodified 1171.5907 0.59070906 3731 Q96A33 CCDC47 Coiled-coil domain-containing protein 47 yes yes 0 0 0 By MS/MS 2 0 1 1 35.735 30.887 2 0.023981 40507 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.598 29.33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24514 3731 22383 206469 164906 164906 1 IMQNTDPHSQEYVEHLK Unmodified 2067.9684 0.96838888 4033 Q99613;B5ME19 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 4 14 1 1 2 2 1 1 2 1 2 1 2 2 44.943 43.923 3;4 0.00011455 47785 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.299 62.432 421800000 17819000 83346000 95025000 11558000 4207600 0 0 11812000 0 28337000 15615000 34393000 21361000 35750000 62576000 24515 4033 22384 206470;206471;206472;206473;206474;206475;206476;206477;206478;206479;206480;206481;206482;206483;206484;206485;206486;206487 164907;164908;164909;164910;164911;164912;164913;164914;164915;164916;164917;164918;164919 164910 11 IMQNTDPHSQEYVEHLK Oxidation (M) 2083.9633 0.9633035 4033 Q99613;B5ME19 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 6 2 2 2 43.438 38.211 3;4 1.5322E-05 48090 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 90.385 81.566 356680000 30380000 148420000 177880000 0 0 0 0 0 0 0 0 0 0 0 0 24516 4033 22384 206488;206489;206490;206491;206492;206493 164920;164921;164922;164923;164924 164923 5534 4 IMQQETSVPTLK Unmodified 1373.7225 0.72245152 3091 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 53.364 52.914 2 7.3869E-07 67465 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.78 84.36 133210000 0 67939000 0 4576300 4540900 4567300 6158000 5677600 4289700 0 8043300 10654000 7869400 8892100 0 24517 3091 22385 206494;206495;206496;206497;206498;206499;206500;206501;206502;206503;206504 164925;164926;164927;164928;164929;164930 164927 6 IMQQETSVPTLK Oxidation (M) 1389.7174 0.71736614 3091 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 yes yes 0 1 0 By MS/MS 10 0 1 1 45.16 45.501 2 0.023437 51234 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 54.094 40.741 8552100 0 0 0 0 0 0 0 0 0 0 0 0 8552100 0 0 24518 3091 22385 206505 164931 164931 0 IMQQMSDHRYDK Oxidation (M) 1566.6919 0.69189644 579 O94760 DDAH1 N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 13.744 10.579 3 0.0016953 15847 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.089 61.016 38716000 35364000 0 3352400 0 0 0 0 0 0 0 0 0 0 0 0 24519 579 22386 206506;206507 164932;164933 164933 737 2 IMQQMSDHRYDK Unmodified 1550.697 0.69698182 579 O94760 DDAH1 N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 yes yes 0 0 1 By MS/MS 2 0 1 1 28.262 22.744 3 0.019608 32117 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.088 52.555 28304000 28304000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24520 579 22386 206508 164934 164934 0 IMQQMSDHRYDK 2 Oxidation (M) 1582.6868 0.68681107 579 O94760 DDAH1 N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 yes yes 0 2 1 By MS/MS By MS/MS 2 0 2 1 1 7.6015 4.7352 3 0.023541 8133 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.066 24.68 72745000 59876000 0 12869000 0 0 0 0 0 0 0 0 0 0 0 0 24521 579 22386 206509;206510 164935 164935 737 0 IMQSPSPENLK Oxidation (M) 1258.6227 0.62273747 4641 Q9NU22 MDN1 Midasin yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 32.643 32.765 2 0.0067558 35832 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 49.715 26.287 26610000 0 0 0 0 0 6360400 3665900 0 2880200 0 0 0 0 13704000 0 24522 4641 22387 206511;206512;206513;206514 164936 164936 6056 1 IMQSPSPENLK Unmodified 1242.6278 0.62782285 4641 Q9NU22 MDN1 Midasin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 44.127 43.463 2 3.6418E-09 55131 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 137.05 96.777 108930000 0 69935000 0 3104400 2237300 0 1873900 8582600 0 0 4170100 0 10454000 8576700 0 24523 4641 22387 206515;206516;206517;206518;206519;206520;206521;206522;206523 164937;164938;164939;164940;164941;164942;164943;164944;164945 164938 9 IMQSSSEVGYDAMAGDFVNMVEK 3 Oxidation (M) 2555.0866 0.08659104 930 P10809 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 0 3 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.69 1.49 1 1 47 2 3 4 4 4 5 3 4 4 4 4 4 4 74.444 74.341 2;3 7.3267E-35 86110 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 104.41 98.7 882440000 0 42938000 0 35195000 56732000 88790000 57698000 89890000 44973000 96142000 87343000 77774000 54312000 58574000 92079000 24524 930 22388 206524;206525;206526;206527;206528;206529;206530;206531;206532;206533;206534;206535;206536;206537;206538;206539;206540;206541;206542;206543;206544;206545;206546;206547;206548;206549;206550;206551;206552;206553;206554;206555;206556;206557;206558;206559;206560;206561;206562;206563;206564;206565;206566;206567;206568;206569;206570;206571;206572 164946;164947;164948;164949;164950;164951;164952;164953;164954;164955;164956;164957;164958;164959;164960;164961;164962;164963;164964;164965;164966;164967;164968;164969;164970;164971;164972;164973;164974;164975;164976;164977;164978 164973 1200;1201;1202 27 IMQSSSEVGYDAMAGDFVNMVEK 2 Oxidation (M) 2539.0917 0.091676418 930 P10809 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 0 2 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.58 3.57 4 2 13 6 1 2 1 1 1 2 1 1 1 2 83.152 81.761 2;3 4.503E-19 101100 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.533 91.257 452870000 0 347460000 0 850780 7299900 0 2166200 4539300 4038200 29832000 0 0 4408200 4517700 47757000 24525 930 22388 206573;206574;206575;206576;206577;206578;206579;206580;206581;206582;206583;206584;206585;206586;206587;206588;206589;206590;206591 164979;164980;164981;164982;164983;164984;164985;164986;164987;164988;164989 164983 1200;1201;1202 8 IMQSSSEVGYDAMAGDFVNMVEK Oxidation (M) 2523.0968 0.096761796 930 P10809 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 0 1 0 By MS/MS By MS/MS 2 0 11 7 4 89.283 85.388 2;3 7.8883E-131 103339 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 190.46 178.54 876030000 0 858710000 17325000 0 0 0 0 0 0 0 0 0 0 0 0 24526 930 22388 206592;206593;206594;206595;206596;206597;206598;206599;206600;206601;206602 164990;164991;164992;164993;164994;164995;164996 164991 1200;1201;1202 7 IMQSSSEVGYDAMAGDFVNMVEK Unmodified 2507.1018 0.10184717 930 P10809 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.29 0.452 5 2 1 5 1 95.44 90.923 2;3 2.3917E-96 112401 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.88 107.16 354850000 10219000 342940000 1700100 0 0 0 0 0 0 0 0 0 0 0 0 24527 930 22388 206603;206604;206605;206606;206607;206608;206609 164997;164998;164999;165000;165001;165002 164998 5 IMQTDEEIGK Unmodified 1162.554 0.5539892 2455 Q14919 DRAP1 Dr1-associated corepressor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 7 3.69 1 1 3 2 1 1 1 32.467 30.907 2 9.5527E-05 38650 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.64 81.136 225410000 0 161420000 0 0 0 0 0 0 0 0 24049000 24606000 0 15334000 0 24528 2455 22389 206610;206611;206612;206613;206614 165003;165004;165005;165006;165007;165008 165003 6 IMQTDEEIGK Oxidation (M) 1178.5489 0.54890383 2455 Q14919 DRAP1 Dr1-associated corepressor yes yes 0 1 0 By matching By MS/MS 10 0 2 1 1 20.866 21.441 2 0.0026308 21307 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.464 61.428 15702000 0 0 0 0 0 0 0 0 0 0 9049300 0 0 0 6652500 24529 2455 22389 206615;206616 165009 165009 4038 1 IMQVVDEK Unmodified 960.49502 0.49501776 2307 Q13510 ASAH1 Acid ceramidase;Acid ceramidase subunit alpha;Acid ceramidase subunit beta yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 34.446 34.345 2 0.01026 38246 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 80.229 45.337 17103000 0 0 0 5403100 2211700 0 2652900 2759700 0 4075400 0 0 0 0 0 24530 2307 22390 206617;206618;206619;206620;206621 165010;165011;165012;165013 165012 4 IMRDPDTGNSK Oxidation (M) 1248.5768 0.57684991 2533 Q15427 SF3B4 Splicing factor 3B subunit 4 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.28 3.25 6 1 25 2 3 2 2 2 2 2 2 2 2 2 2 2 3 2 6.1051 5.5399 2;3 6.0324E-08 6611 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 146.11 122.08 1316800000 183130000 228320000 287040000 40734000 55366000 39273000 77977000 51689000 40559000 6178900 57138000 116580000 64346000 62739000 5700200 24531 2533 22391 206622;206623;206624;206625;206626;206627;206628;206629;206630;206631;206632;206633;206634;206635;206636;206637;206638;206639;206640;206641;206642;206643;206644;206645;206646;206647;206648;206649;206650;206651;206652;206653 165014;165015;165016;165017;165018;165019;165020;165021;165022;165023;165024;165025;165026;165027;165028;165029;165030;165031;165032;165033;165034 165020 4169 16 IMRDPDTGNSK Unmodified 1232.5819 0.58193529 2533 Q15427 SF3B4 Splicing factor 3B subunit 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.72 2 13 1 1 1 1 1 1 1 1 1 2 1 1 1 1 9.932 9.6913 2;3 0.00020714 7696 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.839 86.384 1378400000 0 220370000 124940000 47042000 70248000 57487000 107830000 81771000 42317000 54388000 168960000 151230000 88377000 84475000 78927000 24532 2533 22391 206654;206655;206656;206657;206658;206659;206660;206661;206662;206663;206664;206665;206666;206667;206668 165035;165036;165037;165038;165039;165040;165041;165042;165043;165044;165045;165046;165047;165048 165037 8 IMREPWVEQDK Unmodified 1429.7024 0.70238478 1323 P32754 HPD 4-hydroxyphenylpyruvate dioxygenase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.4 3.67 7 3 4 2 1 1 1 1 53.995 49.19 2;3 8.424E-11 67173 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 133.32 110.77 2513000000 2337300000 129680000 25926000 0 0 9573400 4728200 0 0 5824000 0 0 0 0 0 24533 1323 22392 206669;206670;206671;206672;206673;206674;206675;206676;206677;206678 165049;165050;165051;165052;165053;165054;165055 165051 5 IMREPWVEQDK Oxidation (M) 1445.6973 0.6972994 1323 P32754 HPD 4-hydroxyphenylpyruvate dioxygenase yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 5.08 3.82 13 2 9 10 3 2 1 1 1 1 1 1 1 1 1 42.71 38.948 2;3 4.9642E-05 54876 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 112.43 95.897 4267600000 3899100000 146630000 97852000 3357100 3899400 4504500 0 3504000 3407900 3888000 35179000 0 0 18470000 47865000 24534 1323 22392 206679;206680;206681;206682;206683;206684;206685;206686;206687;206688;206689;206690;206691;206692;206693;206694;206695;206696;206697;206698;206699;206700;206701;206702 165056;165057;165058;165059;165060;165061;165062;165063;165064;165065;165066;165067;165068;165069;165070;165071;165072;165073;165074;165075;165076;165077;165078 165064 1969 22 IMRPDDANVAGNVHGGTILK Oxidation (M) 2093.0688 0.068771627 120 O00154 ACOT7 Cytosolic acyl coenzyme A thioester hydrolase yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 4 4 2 2 2 1 50.133 50.057 2;3;4 2.4635E-63 56955 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 140.17 106.48 1762100000 0 0 0 165360000 337070000 284350000 0 0 0 217700000 277180000 480480000 0 0 0 24535 120 22393 206703;206704;206705;206706;206707;206708;206709;206710;206711;206712;206713;206714;206715;206716;206717 165079;165080;165081;165082;165083;165084;165085;165086;165087;165088;165089;165090;165091;165092;165093;165094;165095;165096;165097 165081 156 18 IMRPDDANVAGNVHGGTILK Unmodified 2077.0739 0.073857005 120 O00154 ACOT7 Cytosolic acyl coenzyme A thioester hydrolase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 2 2 2 2 2 2 1 56.698 56.748 3;4 3.9305E-61 64767 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 142.31 114.81 4048700000 0 0 0 122200000 255970000 746260000 0 0 0 462320000 1102300000 1348400000 0 0 11311000 24536 120 22393 206718;206719;206720;206721;206722;206723;206724;206725;206726;206727;206728;206729;206730 165098;165099;165100;165101;165102;165103;165104;165105;165106;165107;165108;165109;165110;165111;165112;165113;165114;165115;165116 165102 16 IMSCGMDHSLK Unmodified 1277.5566 0.55664852 514 O75530 EED Polycomb protein EED yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 37.967 32.976 3 0.0061033 45747 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.567 44.438 49597000 31628000 11487000 6482200 0 0 0 0 0 0 0 0 0 0 0 0 24537 514 22394 206731;206732;206733 165117;165118;165119 165118 3 IMSQSQVSK Oxidation (M) 1022.5066 0.50664508 1614 P49959 MRE11A Double-strand break repair protein MRE11A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.53 2.94 1 2 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 7.0888 6.4995 2 0.0034678 4703 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 78.516 54.544 139120000 239420 31888000 0 5069100 4853000 7704700 7921900 6576500 5750800 12211000 13860000 9180500 11313000 8539500 14011000 24538 1614 22395 206734;206735;206736;206737;206738;206739;206740;206741;206742;206743;206744;206745;206746;206747;206748 165120;165121;165122;165123;165124;165125;165126;165127;165128;165129;165130 165125 2596 10 IMSQSQVSK Unmodified 1006.5117 0.51173046 1614 P49959 MRE11A Double-strand break repair protein MRE11A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14.383 13.981 2 0.0041874 12928 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.639 44.393 520230000 14888000 267490000 0 10615000 11605000 15217000 13104000 12127000 9093200 25624000 25454000 24177000 21679000 24891000 44261000 24539 1614 22395 206749;206750;206751;206752;206753;206754;206755;206756;206757;206758;206759;206760;206761;206762 165131;165132;165133;165134;165135;165136;165137;165138;165139;165140;165141;165142;165143 165135 9 IMSQWEEK Unmodified 1049.4852 0.48518136 3017 Q6ZUT9 DENND5B DENN domain-containing protein 5B yes yes 0 0 0 By MS/MS 10 0 1 1 37.203 37.669 2 0.018283 41454 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 64.567 26.481 10272000 0 0 0 0 0 0 0 0 0 0 10272000 0 0 0 0 24540 3017 22396 206763 165144 165144 1 IMSSPLSK Oxidation (M) 877.4579 0.45790397 1843 P61254;Q9UNX3 RPL26;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 yes no 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.78 2.74 1 2 15 1 2 1 1 2 2 1 2 1 1 1 1 1 1 22.194 21.617 2 0.0060423 22611 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 83.753 38.78 1072000000 65583 251640000 0 54869000 38510000 99750000 122240000 41798000 92058000 71232000 77029000 63109000 71831000 44646000 43207000 24541 1843 22397 206764;206765;206766;206767;206768;206769;206770;206771;206772;206773;206774;206775;206776;206777;206778;206779;206780;206781 165145;165146;165147;165148;165149;165150;165151;165152;165153;165154;165155;165156;165157 165156 2995 13 IMSSPLSK Unmodified 861.46299 0.46298935 1843 P61254;Q9UNX3 RPL26;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 yes no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.6 3.67 3 7 1 1 1 1 1 1 1 1 1 1 37.287 35.954 2 0.010495 40351 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 79.469 29.349 1535800000 355830000 502980000 10949000 0 62930000 0 0 66162000 56661000 0 0 137570000 105820000 87708000 149240000 24542 1843 22397 206782;206783;206784;206785;206786;206787;206788;206789;206790;206791 165158;165159;165160;165161;165162;165163;165164;165165;165166 165166 8 IMSYFKEAELK Unmodified 1357.6952 0.69517413 1275 P30291 WEE1 Wee1-like protein kinase yes yes 0 0 1 By MS/MS 10 0 1 1 7.8718 8.0276 3 0.0015975 6087 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 56.359 7.9192 31796000 0 0 0 0 0 0 0 31796000 0 0 0 0 0 0 0 24543 1275 22398 206792 165167 165167 1 IMTAPSSFEQFK Unmodified 1384.6697 0.66968766 5107 Q9Y2K1 ZBTB1 Zinc finger and BTB domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 72.585 72.68 2 0.0013438 83302 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.657 27.209 39272000 0 0 0 0 4108300 5853400 0 4452000 0 7114900 4327400 0 0 3126700 10290000 24544 5107 22399 206793;206794;206795;206796;206797;206798;206799 165168;165169;165170;165171;165172 165169 5 IMTTLNMLGGR Oxidation (M) 1221.621 0.62096333 775 P04150 NR3C1 Glucocorticoid receptor yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 66.354 66.612 2 0.0039705 75408 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 57.59 49.658 50506000 0 0 0 0 0 0 3652700 0 3308400 4934100 6897200 10053000 5288200 6329800 10042000 24545 775 22400 206800;206801;206802;206803;206804;206805;206806;206807;206808 165173;165174;165175;165176;165177;165178;165179;165180;165181;165182 165182 932;933 10 IMTTLNMLGGR 2 Oxidation (M) 1237.6159 0.61587795 775 P04150 NR3C1 Glucocorticoid receptor yes yes 0 2 0 By MS/MS By MS/MS By matching By matching 10 0 4 1 1 1 1 49.027 49.058 2 0.0019177 54901 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 57.859 31.166 36485000 0 0 0 0 5096800 0 7808200 0 0 12711000 10869000 0 0 0 0 24546 775 22400 206809;206810;206811;206812 165183;165184 165183 932;933 1 IMTTLNMLGGR Unmodified 1205.626 0.62604871 775 P04150 NR3C1 Glucocorticoid receptor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 75.301 75.499 2 0.00036177 87055 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 87.913 71.58 33385000 0 0 0 0 0 0 2054100 6683400 0 0 4673500 5568900 2562400 0 11842000 24547 775 22400 206813;206814;206815;206816;206817;206818;206819;206820;206821 165185;165186;165187;165188;165189;165190 165188 5 IMVDMLDSDGSGK Oxidation (M) 1382.6058 0.60576678 1057 P17655 CAPN2 Calpain-2 catalytic subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.21 3.75 4 1 9 2 3 1 1 1 1 1 1 1 1 1 58.634 56.324 2 0.00068993 66555 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 65.842 55.318 362120000 11368000 296700000 0 4788800 3377000 5010800 4568900 4740400 3466900 0 10132000 9735600 8232900 0 0 24548 1057 22401 206822;206823;206824;206825;206826;206827;206828;206829;206830;206831;206832;206833;206834;206835 165191;165192;165193;165194;165195;165196;165197;165198;165199;165200;165201;165202;165203;165204 165199 1481;1482 12 IMVDMLDSDGSGK Unmodified 1366.6109 0.61085216 1057 P17655 CAPN2 Calpain-2 catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.87 3.54 4 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 68.043 66.537 2 7.2554E-25 83596 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 188.99 176.75 502530000 9651000 396800000 1046700 2762100 2973400 10503000 3422600 5099300 0 9868200 10666000 7775800 7137000 6722200 28099000 24549 1057 22401 206836;206837;206838;206839;206840;206841;206842;206843;206844;206845;206846;206847;206848;206849;206850 165205;165206;165207;165208;165209;165210;165211;165212;165213;165214;165215;165216;165217;165218 165208 13 IMVDMLDSDGSGK 2 Oxidation (M) 1398.6007 0.6006814 1057 P17655 CAPN2 Calpain-2 catalytic subunit yes yes 0 2 0 By MS/MS By MS/MS 2 0 2 1 1 44.255 38.239 2 0.0085057 52275 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.82 54.062 47066000 11476000 35590000 0 0 0 0 0 0 0 0 0 0 0 0 0 24550 1057 22401 206851;206852 165219;165220 165220 1481;1482 1 IMVGSTDDPSVFSLPDSK Oxidation (M) 1909.8979 0.89790928 361 O43741 PRKAB2 5'-AMP-activated protein kinase subunit beta-2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 8.86 2.8 1 6 1 1 1 1 1 1 1 80.392 79.756 2 4.1605E-28 98035 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.56 113.36 51880000 0 37233000 0 0 1464900 3152900 2112100 0 0 2793100 0 2645400 0 2478000 0 24551 361 22402 206853;206854;206855;206856;206857;206858;206859 165221;165222 165222 462 2 IMVGSTDDPSVFSLPDSK Unmodified 1893.903 0.90299466 361 O43741 PRKAB2 5'-AMP-activated protein kinase subunit beta-2 yes yes 0 0 0 By MS/MS 2 0 1 1 86.113 81.338 2 1.8359E-05 101249 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 111.12 97.453 42608000 0 42608000 0 0 0 0 0 0 0 0 0 0 0 0 0 24552 361 22402 206860 165223 165223 1 IMVVGSTINDVLAVNTPK Oxidation (M) 1886.0183 0.018299186 188 O14562 UBFD1 Ubiquitin domain-containing protein UBFD1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 4.78 3.71 5 1 3 2 3 1 1 1 1 87.808 83.892 2;3 9.5432E-20 98569 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 99.531 85.625 83248000 19885000 48806000 1648700 0 0 0 0 0 0 4631000 0 0 0 0 8277500 24553 188 22403 206861;206862;206863;206864;206865;206866;206867;206868;206869 165224;165225;165226;165227;165228;165229;165230;165231 165224 259 7 IMVVGSTINDVLAVNTPK Unmodified 1870.0234 0.023384564 188 O14562 UBFD1 Ubiquitin domain-containing protein UBFD1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 92.803 87.636 2;3 0.0030421 110187 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 40.349 30.185 25992000 10409000 15036000 546760 0 0 0 0 0 0 0 0 0 0 0 0 24554 188 22403 206870;206871;206872 165232;165233 165232 2 IMYDLTSKPPGTTEWE Oxidation (M) 1882.8659 0.86588087 1612 P49915 GMPS GMP synthase [glutamine-hydrolyzing] yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 75.102 75.154 2 8.1667E-19 86576 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 110.66 95.971 152380000 0 0 0 4823800 8153000 21722000 10540000 8733200 7328900 18279000 17576000 16408000 7765900 0 31047000 24555 1612 22404 206873;206874;206875;206876;206877;206878;206879;206880;206881;206882;206883 165234;165235;165236;165237;165238;165239;165240;165241;165242;165243 165234 2591 10 IMYDLTSKPPGTTEWE Unmodified 1866.871 0.87096625 1612 P49915 GMPS GMP synthase [glutamine-hydrolyzing] yes yes 0 0 1 By MS/MS 10 0 1 1 78.51 78.756 2 6.5554E-26 90656 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 128.33 103.11 38790000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38790000 24556 1612 22404 206884 165244 165244 1 INAAEIESR Unmodified 1001.5142 0.5141733 2122 Q06124 PTPN11 Tyrosine-protein phosphatase non-receptor type 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 34.08 34.219 2 0.010094 36418 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.841 23.812 102340000 0 0 0 0 7309100 10211000 10448000 9770400 6221500 14238000 0 0 21377000 0 22766000 24557 2122 22405 206885;206886;206887;206888;206889;206890;206891;206892;206893;206894 165245;165246;165247;165248;165249;165250;165251;165252 165247 8 INAANYASVK Unmodified 1049.5506 0.55055881 3882 Q96IU4 ABHD14B Alpha/beta hydrolase domain-containing protein 14B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 36.899 35.792 2 0.0025237 39703 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 82.749 45.59 799620000 24452000 528520000 5601600 12414000 11447000 26138000 16809000 13385000 9568600 29917000 20320000 20785000 19090000 22012000 39155000 24558 3882 22406 206895;206896;206897;206898;206899;206900;206901;206902;206903;206904;206905;206906;206907;206908;206909;206910 165253;165254;165255;165256;165257;165258;165259;165260;165261;165262;165263;165264;165265;165266;165267;165268;165269 165255 15 INAENEVPILK Unmodified 1238.6871 0.68705229 5200 Q9Y4F5 CEP170B Centrosomal protein of 170 kDa protein B yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 66.62 66.476 2 0.030132 76180 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 38.754 19.511 18717000 0 0 0 5313900 3300000 2481100 0 3725100 0 0 3896800 0 0 0 0 24559 5200 22407 206911;206912;206913;206914;206915;206916 165270;165271 165270 2 INAEPSESDTAR Unmodified 1288.5895 0.58952309 5063 Q9UPW5 AGTPBP1 Cytosolic carboxypeptidase 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 19.02 19.217 2 0.00095704 19699 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 72.006 52.735 21780000 0 0 0 0 2950400 2981400 2292200 0 2195100 0 3683100 3391300 2851000 1435700 0 24560 5063 22408 206917;206918;206919;206920;206921;206922;206923;206924;206925;206926 165272;165273;165274;165275;165276;165277;165278;165279 165279 8 INAEQQLK Unmodified 942.51345 0.51344502 189 O14578 CIT Citron Rho-interacting kinase yes yes 0 0 0 By MS/MS 2 0 1 1 25.042 20.839 2 0.015636 27671 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.561 19.146 24604000 0 24604000 0 0 0 0 0 0 0 0 0 0 0 0 0 24561 189 22409 206927 165280 165280 1 INAGFGDDLNCIFNDDNAEK Unmodified 2240.9644 0.96442571 1179 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 0 0 0 By MS/MS 2.5 0.5 2 2 4 89.166 85.116 2;3 1.3852E-98 105770 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 166.9 153.77 58061000 0 58061000 0 0 0 0 0 0 0 0 0 0 0 0 0 24562 1179 22410 206928;206929;206930;206931 165281;165282 165281 2 INAGMLAQFIDK Oxidation (M) 1335.6857 0.68567208 1346 P35244 RPA3 Replication protein A 14 kDa subunit yes yes 0 1 0 By MS/MS 10 0 1 1 82.329 82.349 2 0.013458 95346 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 40.496 8.562 1704100 0 0 0 0 0 1704100 0 0 0 0 0 0 0 0 0 24563 1346 22411 206932 165283 165283 2045 1 INANIREEDEK Unmodified 1329.6525 0.6524577 4947 Q9UJX6 ANAPC2 Anaphase-promoting complex subunit 2 yes yes 0 0 1 By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 2 2 20.637 20.918 2;3 0.02298 20541 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.379 18.68 216000000 0 0 0 14690000 0 17880000 1240100 10377000 13746000 18598000 27223000 28565000 26336000 24758000 32583000 24564 4947 22412 206933;206934;206935;206936;206937;206938;206939;206940;206941;206942;206943;206944;206945 165284;165285 165284 1 INAQYLEVK Unmodified 1076.5866 0.58660996 4413 Q9H6D7 HAUS4 HAUS augmin-like complex subunit 4 yes yes 0 0 0 By matching By MS/MS By MS/MS 2 0 3 1 1 1 58.81 52.831 2 0.032444 68061 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.252 17.404 102550000 11622000 89861000 1064200 0 0 0 0 0 0 0 0 0 0 0 0 24565 4413 22413 206946;206947;206948 165286 165286 1 INATDADEPNTLNSK Unmodified 1601.7533 0.75329395 2369 Q14126 DSG2 Desmoglein-2 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching 10 0 5 1 1 1 1 1 32.382 32.374 2 0.020862 35832 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 32.606 18.943 12471000 0 0 0 3669200 0 1524900 2724200 3120300 1432100 0 0 0 0 0 0 24566 2369 22414 206949;206950;206951;206952;206953 165287 165287 1 INAVVETGRR Unmodified 1113.6255 0.62545508 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 21.112 21.549 2 0.0062867 21910 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 120.12 52.95 42998000 0 0 0 0 0 0 0 0 0 5818700 6791200 6837200 5718600 8081500 9751100 24567 2047 22415 206954;206955;206956;206957;206958;206959 165288;165289;165290;165291;165292 165290 5 INAWNSPTLPIYEPGLK Unmodified 1912.0094 0.0094490594 425 O60701 UGDH UDP-glucose 6-dehydrogenase yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 87.577 87.741 2 0.00057637 101488 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.089 64.365 13406000 0 0 0 0 0 0 0 919180 0 0 2275000 0 0 1264400 8947600 24568 425 22416 206960;206961;206962;206963 165293;165294 165293 2 INDALSCEYECR Unmodified 1528.6286 0.62862749 2693 Q52LJ0 FAM98B Protein FAM98B yes yes 0 0 0 By MS/MS 10 0 1 1 44.988 45.729 2 0.025541 50355 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.408 53.721 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24569 2693 22417 206964 165295 165295 1 INDFCRSQCPPIK Unmodified 1633.7705 0.77048112 3 A0AVT1 UBA6 Ubiquitin-like modifier-activating enzyme 6 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 47.358 41.537 3 0.015075 57336 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.069 34.361 31356000 28261000 0 3095800 0 0 0 0 0 0 0 0 0 0 0 0 24570 3 22418 206965;206966 165296 165296 1 INDFVLSPGPQPYK Unmodified 1573.814 0.81404372 4242 Q9BY44 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 76.923 75.571 2;3 2.8375E-29 93797 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.38 116.79 1163100000 21949000 963930000 16529000 5125000 5403600 18282000 13363000 7890500 0 14491000 18423000 14024000 16423000 19130000 28187000 24571 4242 22419 206967;206968;206969;206970;206971;206972;206973;206974;206975;206976;206977;206978;206979;206980;206981;206982;206983 165297;165298;165299;165300;165301;165302;165303;165304;165305;165306;165307;165308;165309;165310;165311;165312;165313 165300 16 INDLVEFPVR Unmodified 1200.6503 0.65027285 611 O94966 USP19 Ubiquitin carboxyl-terminal hydrolase 19 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 78.911 78.836 2 0.036585 91145 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 41.117 16.962 24359000 0 0 0 2522600 3421300 0 0 0 0 0 11828000 0 0 0 6586800 24572 611 22420 206984;206985;206986;206987 165314 165314 1 INDRFEFPEQLPLDEFLQK Unmodified 2377.1954 0.19541193 3702 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 0 0 1 By MS/MS 3 0 1 1 97.449 94.141 3 1.2584E-05 112836 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 67.43 53.558 7979200 0 7979200 0 0 0 0 0 0 0 0 0 0 0 0 0 24573 3702 22421 206988 165315 165315 1 INEAFIEMATTEDAQAAVDYYTTTPALVFGK Unmodified 3379.617 0.61698998 1473 P43243 MATR3 Matrin-3 yes yes 0 0 0 By MS/MS 3 0 1 1 99.639 96.093 3 1.8022E-12 99914 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 59.971 57.888 7073000 7073000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24574 1473 22422 206989 165316 165316 1 INEAFIEMATTEDAQAAVDYYTTTPALVFGK Oxidation (M) 3395.6119 0.6119046 1473 P43243 MATR3 Matrin-3 yes yes 0 1 0 By MS/MS 2 0 1 1 98.439 96.012 3 2.4247E-06 116078 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 42.121 36.341 3524100 0 0 3524100 0 0 0 0 0 0 0 0 0 0 0 0 24575 1473 22422 206990 165317 165317 2311 1 INEAIVAVQAIIADPK Unmodified 1663.9509 0.95087155 5076 Q9Y224 C14orf166 UPF0568 protein C14orf166 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 2 3 1 96.845 91.586 2;3 3.6241E-11 115209 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.12 104.22 134230000 48252000 83451000 2523300 0 0 0 0 0 0 0 0 0 0 0 0 24576 5076 22423 206991;206992;206993;206994;206995;206996 165318;165319;165320;165321 165320 3 INEAVECLLSLK Unmodified 1387.7381 0.73810158 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 87.599 86.334 2 2.0574E-18 108367 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 158.94 133.55 603000000 20338000 482210000 14795000 0 1140300 4699000 1582800 0 6212600 11280000 10221000 13985000 4172700 6352300 26019000 24577 848 22424 206997;206998;206999;207000;207001;207002;207003;207004;207005;207006;207007;207008;207009;207010 165322;165323;165324;165325;165326;165327;165328;165329;165330;165331;165332;165333;165334;165335;165336;165337 165325 16 INEEISVK Unmodified 930.50221 0.50221163 4162 Q9BUJ2 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 2 1 1 1 1 1 1 1 1 1 1 1 1 34.39 33.902 2 0.0046994 43332 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.61 67.809 1181700000 0 669720000 3269200 34611000 34150000 37888000 35956000 37570000 31061000 55907000 76878000 69797000 46568000 48301000 0 24578 4162 22425 207011;207012;207013;207014;207015;207016;207017;207018;207019;207020;207021;207022;207023;207024 165338;165339;165340;165341;165342;165343;165344 165340 5 INEELESQYQQSMDSK Oxidation (M) 1943.8419 0.84185096 127 O00193 SMAP Small acidic protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.21 1 4 1 24 2 4 2 2 2 2 2 2 2 2 2 2 2 2 44.86 44.247 2;3 4.0078E-84 47427 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 184.96 162.39 588580000 5957800 214310000 0 18590000 17135000 16753000 23219000 20106000 18386000 31438000 53633000 50137000 42952000 31035000 44932000 24579 127 22426 207025;207026;207027;207028;207029;207030;207031;207032;207033;207034;207035;207036;207037;207038;207039;207040;207041;207042;207043;207044;207045;207046;207047;207048;207049;207050;207051;207052;207053;207054 165345;165346;165347;165348;165349;165350;165351;165352;165353;165354;165355;165356;165357;165358;165359;165360;165361;165362;165363;165364;165365;165366;165367;165368;165369;165370;165371;165372;165373;165374;165375;165376 165364 164 31 INEELESQYQQSMDSK Unmodified 1927.8469 0.84693634 127 O00193 SMAP Small acidic protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.89 3.41 3 2 13 1 4 1 1 1 1 1 1 1 1 1 1 1 2 53.951 52.311 2;3 4.0388E-36 59100 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 187.44 181.78 1152400000 8563400 830740000 0 17058000 19122000 14632000 20880000 21929000 13292000 23188000 35146000 40730000 38867000 23123000 45104000 24580 127 22426 207055;207056;207057;207058;207059;207060;207061;207062;207063;207064;207065;207066;207067;207068;207069;207070;207071;207072 165377;165378;165379;165380;165381;165382;165383;165384;165385;165386;165387;165388;165389;165390;165391;165392 165382 16 INEENTAISR Unmodified 1145.5677 0.56766543 4750 Q9NYU1 UGGT2 UDP-glucose:glycoprotein glucosyltransferase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 22.328 22.591 2 0.001444 23545 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 91.087 45.407 28636000 0 0 0 2043900 1884200 0 0 0 0 4689000 5537700 5465500 4501900 0 4514100 24581 4750 22427 207073;207074;207075;207076;207077;207078;207079 165393;165394;165395;165396;165397;165398 165393 6 INEGDLIAEVETDK Unmodified 1544.757 0.75698235 921 P10515 DLAT Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 82.267 77.562 2 9.7544E-06 96539 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.39 77.008 18613000 0 18613000 0 0 0 0 0 0 0 0 0 0 0 0 0 24582 921 22428 207080 165399 165399 1 INEILSNALK Unmodified 1113.6394 0.63937381 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.324 67.406 2 1.4085E-09 76933 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 141.02 82.303 1170200000 0 0 0 65235000 67763000 79143000 94187000 88192000 56386000 96168000 114830000 132800000 109590000 107170000 158730000 24583 1681 22429 207081;207082;207083;207084;207085;207086;207087;207088;207089;207090;207091;207092 165400;165401;165402;165403;165404;165405;165406;165407;165408;165409;165410;165411;165412 165410 11 INEINTEINQLIEK Unmodified 1669.8887 0.88866522 3599 Q8WYA0 IFT81 Intraflagellar transport protein 81 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 88.026 83.184 2 0.00090897 103423 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.5 84.82 24108000 0 24108000 0 0 0 0 0 0 0 0 0 0 0 0 0 24584 3599 22430 207093 165413 165413 1 INEIRQMSGAQIK Oxidation (M) 1502.7875 0.78751139 2521 Q15366;P57721 PCBP2;PCBP3 Poly(rC)-binding protein 2;Poly(rC)-binding protein 3 yes no 0 1 1 By MS/MS By MS/MS By MS/MS 2 0 7 4 1 2 31.572 26.64 2;3 0.00042665 36729 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.39 65.882 745190000 692930000 40034000 12229000 0 0 0 0 0 0 0 0 0 0 0 0 24585 2521 22431 207094;207095;207096;207097;207098;207099;207100 165414;165415;165416;165417;165418;165419;165420 165415 4151 5 INEIRQMSGAQIK Unmodified 1486.7926 0.79259677 2521 Q15366;P57721 PCBP2;PCBP3 Poly(rC)-binding protein 2;Poly(rC)-binding protein 3 yes no 0 0 1 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 49.62 43.201 3 3.7449E-07 59649 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.552 66.506 1601500000 1593800000 7696300 0 0 0 0 0 0 0 0 0 0 0 0 0 24586 2521 22431 207101;207102 165421;165422;165423;165424;165425 165423 5 INEIRTLIDL Unmodified 1198.6921 0.69213767 2411 Q14527 HLTF Helicase-like transcription factor yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 91.926 86.759 2 4.4968E-05 105695 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 129.38 27.739 56826000 13107000 40051000 3667900 0 0 0 0 0 0 0 0 0 0 0 0 24587 2411 22432 207103;207104;207105 165426;165427;165428;165429 165429 4 INELEAALQK Unmodified 1127.6186 0.61863837 4937 Q9UJC3 HOOK1 Protein Hook homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 60.662 60.753 2 0.0052248 68378 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.812 11.692 50486000 0 0 0 3865100 3758500 4753800 3658000 5660900 2457600 0 5476700 6426600 5195100 0 9233900 24588 4937 22433 207106;207107;207108;207109;207110;207111;207112;207113;207114;207115;207116 165430;165431;165432;165433;165434 165431 5 INELLLAK Unmodified 912.56442 0.56441796 3242 Q8IWJ2 GCC2 GRIP and coiled-coil domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 60.59 59.658 2 0.0082561 68010 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 86.833 9.5504 94947000 0 61811000 4265200 0 2121800 4233600 3509400 0 1949900 0 4168600 5919000 0 0 6968300 24589 3242 22434 207117;207118;207119;207120;207121;207122;207123;207124;207125 165435;165436;165437;165438;165439;165440;165441;165442 165436 8 INELMPK Unmodified 843.45242 0.45242467 1758 P55145 MANF Mesencephalic astrocyte-derived neurotrophic factor yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 41.74 37.241 2 0.035514 48435 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.244 34.837 547280000 0 540020000 7267400 0 0 0 0 0 0 0 0 0 0 0 0 24590 1758 22435 207126;207127;207128 165443;165444 165443 2 INELPSTMQR Oxidation (M) 1203.5918 0.59177169 1597 P49757 NUMB Protein numb homolog yes yes 0 1 0 By MS/MS By matching By matching By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 31.714 32.116 2 0.015609 35066 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 45.368 13.946 28521000 0 0 0 0 0 0 5852800 0 0 5518700 3960500 5407300 0 2673800 5108300 24591 1597 22436 207129;207130;207131;207132;207133;207134 165445 165445 2570 1 INELPTEETEIMIVQAK Oxidation (M) 1973.0027 0.0027087015 441 O60885 BRD4 Bromodomain-containing protein 4 yes yes 0 1 0 By MS/MS By MS/MS 4 3.03 2 2 1 4 1 80.851 77.685 2;3 4.7231E-46 96180 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 135.6 101.72 176960000 0 173550000 0 0 0 0 0 0 3409700 0 0 0 0 0 0 24592 441 22437 207135;207136;207137;207138;207139 165446;165447;165448;165449 165446 564 3 INELPTEETEIMIVQAK Unmodified 1957.0078 0.0077940794 441 O60885 BRD4 Bromodomain-containing protein 4 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 86.815 82.799 2 2.2549E-26 102913 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 159.99 121.97 54096000 0 54096000 0 0 0 0 0 0 0 0 0 0 0 0 0 24593 441 22437 207140;207141 165450;165451;165452 165450 3 INELQAELQAFK Unmodified 1402.7456 0.7456298 4630 Q9NSV4 DIAPH3 Protein diaphanous homolog 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83.044 82.694 2 3.7653E-43 95752 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 180.67 153.05 218440000 0 2928900 1797800 3521200 9712800 15135000 9354200 15494000 15647000 24455000 18597000 27530000 15958000 20791000 37515000 24594 4630 22438 207142;207143;207144;207145;207146;207147;207148;207149;207150;207151;207152;207153;207154;207155 165453;165454;165455;165456;165457;165458;165459;165460;165461;165462;165463;165464;165465;165466 165454 12 INELTGIK Unmodified 886.51238 0.51238239 1369 P35998 PSMC2 26S protease regulatory subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 41.761 40.557 2 0.0025159 50186 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 122.18 34.147 3894000000 66479000 2660400000 58769000 65973000 87680000 113710000 46909000 27173000 32224000 153120000 186660000 212540000 40830000 46015000 95503000 24595 1369 22439 207156;207157;207158;207159;207160;207161;207162;207163;207164;207165;207166;207167;207168;207169;207170;207171 165467;165468;165469;165470;165471;165472;165473;165474;165475;165476;165477;165478;165479;165480;165481;165482 165474 15 INENDPEYIRER Unmodified 1546.7376 0.73758431 4874 Q9UEY8 ADD3 Gamma-adducin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.329 34.512 3 0.0078237 36955 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.077 29.69 70200000 0 0 0 3707400 3612800 5189000 4214400 3885700 3598800 4259000 10036000 12349000 4673000 5254600 9419700 24596 4874 22440 207172;207173;207174;207175;207176;207177;207178;207179;207180;207181;207182;207183 165483 165483 1 INETDTFGPGDDDEIQFDDIGDDDEDIDDI Unmodified 3357.3328 0.33282502 1526 P47813;O14602 EIF1AX;EIF1AY Eukaryotic translation initiation factor 1A, X-chromosomal;Eukaryotic translation initiation factor 1A, Y-chromosomal yes no 0 0 0 By MS/MS 1 0 1 1 103.65 108.92 3 0.0083577 89042 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 22.511 20.829 36161000 36161000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24597 1526 22441 207184 165484;165485 165485 2 INETFVDK Unmodified 964.48656 0.48656157 3537 Q8WUA2 PPIL4 Peptidyl-prolyl cis-trans isomerase-like 4 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 36.012 35.457 2 0.012067 45046 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.29 62.574 735260000 0 669180000 0 8736100 0 6687000 11908000 6834000 0 8797600 0 0 13278000 9836900 0 24598 3537 22442 207185;207186;207187;207188;207189;207190;207191;207192;207193 165486;165487;165488;165489;165490;165491 165489 6 INEVQTDVGVDTK Unmodified 1416.7096 0.70963822 2190 Q12792 TWF1 Twinfilin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 4.14 3.76 2 2 1 2 2 3 1 1 62.319 60.647 2 3.8808E-22 102108 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 148.28 106.09 167350000 37898000 109350000 0 4819600 0 0 0 0 0 0 0 0 0 15282000 0 24599 2190 22443 207194;207195;207196;207197;207198;207199;207200 165492;165493;165494;165495;165496;165497;165498;165499 165497 8 INEWLTLVEK Unmodified 1243.6812 0.68123863 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.7 3.52 2 1 7 2 1 1 1 1 1 1 1 1 86.111 85.101 2 3.4443E-06 106710 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 161.76 133.37 213310000 0 139520000 22084000 0 2893000 7599100 2852400 0 0 8843400 0 0 5200800 6815900 17496000 24600 2392 22444 207201;207202;207203;207204;207205;207206;207207;207208;207209;207210 165500;165501;165502;165503;165504 165501 5 INFDDNAEFRQK Unmodified 1495.7056 0.7055559 3875 Q96I99 SUCLG2 Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial yes yes 0 0 1 By matching By matching By MS/MS 2 0 3 1 1 1 55.164 49.195 3 0.024633 61598 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 57.164 46.811 29493000 6399600 9547400 13546000 0 0 0 0 0 0 0 0 0 0 0 0 24601 3875 22445 207211;207212;207213 165505 165505 0 INFDDSK Unmodified 837.38685 0.38684752 4890 Q9UH65 SWAP70 Switch-associated protein 70 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 25.083 25.286 2 0.04393 26905 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 67.032 34.562 140500000 0 0 0 9726600 6352000 11642000 8555900 6361200 6168900 11744000 18189000 12092000 12210000 12818000 24639000 24602 4890 22446 207214;207215;207216;207217;207218;207219;207220;207221;207222;207223;207224;207225 165506 165506 1 INFDSNSAYRQK Unmodified 1441.695 0.69499121 4827 Q9P2R7 SUCLA2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 39.828 34.743 3 0.008977 47759 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.087 46.979 20970000 17613000 0 3357300 0 0 0 0 0 0 0 0 0 0 0 0 24603 4827 22447 207226;207227 165507 165507 1 INFLSNNQCENIR Unmodified 1620.7678 0.76783858 4837 Q9UBD5 ORC3 Origin recognition complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching 10 0 12 1 1 1 2 1 1 1 1 1 1 1 64.953 65.03 2 0.0052066 74438 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 49.35 30.108 58738000 0 0 0 1744700 2184500 7788800 4741400 2801200 5786800 5661800 9309800 7601800 4787900 0 6329100 24604 4837 22448 207228;207229;207230;207231;207232;207233;207234;207235;207236;207237;207238;207239 165508;165509;165510;165511 165511 4 INFSDLDQRSIGSDSQGR Unmodified 1993.9453 0.94534525 2502 Q15154 PCM1 Pericentriolar material 1 protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 2 1 1 1 1 1 44.504 44.737 3 0.021907 50372 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 27.149 21.027 651510000 0 0 0 0 33200000 74789000 30396000 35002000 59748000 146650000 42006000 87162000 57794000 39155000 45609000 24605 2502 22449 207240;207241;207242;207243;207244;207245;207246;207247;207248;207249;207250;207251 165512;165513 165512 2 INFVGGNK Unmodified 847.4552 0.45520186 3913 Q96KR1 ZFR Zinc finger RNA-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 34.749 33.874 2 0.017225 46264 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.777 35.99 260260000 73128000 43552000 0 0 11510000 11509000 14224000 13096000 9922900 17891000 19454000 25780000 0 0 20194000 24606 3913 22450 207252;207253;207254;207255;207256;207257;207258;207259;207260;207261;207262 165514;165515;165516;165517;165518 165515 3 INFVIDNNK Unmodified 1075.5662 0.56620887 517 O75534 CSDE1 Cold shock domain-containing protein E1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 2 1 1 1 1 1 59.603 57.783 2 0.0037225 64811 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 122.19 63.583 660720000 48831000 381420000 14634000 14237000 9731300 0 20357000 0 0 0 28555000 33241000 26591000 24883000 58244000 24607 517 22451 207263;207264;207265;207266;207267;207268;207269;207270;207271;207272;207273;207274;207275;207276 165519;165520;165521;165522;165523;165524;165525;165526;165527;165528;165529;165530;165531;165532;165533;165534;165535;165536 165529 17 INGEAQPWLSTSTEGLK Unmodified 1829.9159 0.9159426 3108 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 75.181 74.509 2 5.5501E-36 85958 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 153.75 131.22 574460000 0 294080000 2218800 12434000 15876000 12178000 15620000 13939000 16525000 29736000 33121000 29378000 20882000 31631000 46842000 24608 3108 22452 207277;207278;207279;207280;207281;207282;207283;207284;207285;207286;207287;207288;207289;207290;207291 165537;165538;165539;165540;165541;165542;165543;165544;165545;165546;165547;165548;165549;165550;165551 165549 15 INGEVSSISSK Unmodified 1119.5772 0.57716749 5236 Q9Y5K6 CD2AP CD2-associated protein yes yes 0 0 0 By MS/MS 2 0 1 1 29.984 25.591 2 0.00060996 33434 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.04 64.398 46081000 0 46081000 0 0 0 0 0 0 0 0 0 0 0 0 0 24609 5236 22453 207292 165552 165552 1 INGIFPGTPLK Unmodified 1155.6652 0.66519463 3198 Q86XN7 PROSER1 Proline and serine-rich protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.287 76.345 2 0.00064191 88108 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 85.29 62.799 161500000 0 0 0 6058100 9445500 10541000 11625000 16214000 12893000 14336000 13679000 17821000 18908000 13051000 16925000 24610 3198 22454 207293;207294;207295;207296;207297;207298;207299;207300;207301;207302;207303;207304 165553;165554;165555;165556;165557;165558;165559;165560;165561;165562;165563;165564 165553 11 INGIFPGTPLKK Unmodified 1283.7602 0.76015765 3198 Q86XN7 PROSER1 Proline and serine-rich protein 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 63.324 63.214 3 0.034896 72203 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 27.526 25.367 35437000 0 0 0 6226500 5279300 0 8130000 9495000 0 0 6306600 0 0 0 0 24611 3198 22455 207305;207306;207307;207308;207309 165565 165565 1 INGMVGLVPK Unmodified 1026.5896 0.58958685 1035 P16333 NCK1 Cytoplasmic protein NCK1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 67.317 66.251 2 0.0033402 88154 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.909 70.015 95912000 65208000 0 2979700 2388600 0 2913600 2695700 0 0 2815800 3431400 4026100 0 3789100 5663300 24612 1035 22456 207310;207311;207312;207313;207314;207315;207316;207317;207318;207319 165566;165567;165568;165569;165570 165567 5 INGMVGLVPK Oxidation (M) 1042.5845 0.58450147 1035 P16333 NCK1 Cytoplasmic protein NCK1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 52.932 46.991 2 0.015898 64064 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.88 48.916 59135000 19172000 35853000 4110800 0 0 0 0 0 0 0 0 0 0 0 0 24613 1035 22456 207320;207321;207322 165571 165571 1462 1 INGQPISPELFTK Unmodified 1442.7769 0.77692993 2119 Q05932 FPGS Folylpolyglutamate synthase, mitochondrial yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 75.776 75.933 2 0.027418 87532 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 35.652 11.622 18548000 0 0 0 0 0 0 5722400 0 0 3074500 9751200 0 0 0 0 24614 2119 22457 207323;207324;207325 165572 165572 1 INGTVTENMSLTDAK Oxidation (M) 1608.7665 0.76650118 2136 Q07157 TJP1 Tight junction protein ZO-1 yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 38.95 38.992 2 0.0074493 43488 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.841 25.722 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24615 2136 22458 207326;207327 165573;165574 165573 3438 2 INGTVTENMSLTDAK Unmodified 1592.7716 0.77158655 2136 Q07157 TJP1 Tight junction protein ZO-1 yes yes 0 0 0 By MS/MS 2 0 2 2 59.858 54 2 8.428E-05 70232 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.98 84.304 14766000 0 14766000 0 0 0 0 0 0 0 0 0 0 0 0 0 24616 2136 22458 207328;207329 165575;165576 165576 2 INGYTGPGTVR Unmodified 1133.5829 0.58292157 2099 Q04206 RELA Transcription factor p65 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 34.089 34.269 2 0.004567 37674 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 61.161 23.434 49590000 0 0 0 4008000 0 0 3953100 4290100 3736800 8065800 0 0 4071700 5730700 15734000 24617 2099 22459 207330;207331;207332;207333;207334;207335;207336;207337 165577;165578;165579;165580;165581;165582;165583 165582 7 INHEGEVNR Unmodified 1066.5156 0.51557028 2615;2169 Q09028;Q16576 RBBP4;RBBP7 Histone-binding protein RBBP4;Histone-binding protein RBBP7 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6.4365 6.1541 2 3.1823E-20 4620 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 174.52 150.36 452020000 0 7673300 14695000 22029000 30822000 30136000 42650000 28015000 29975000 23068000 60113000 36213000 29508000 41589000 55530000 24618 2169;2615 22460 207338;207339;207340;207341;207342;207343;207344;207345;207346;207347;207348;207349;207350;207351 165584;165585;165586;165587;165588;165589;165590;165591;165592;165593;165594;165595;165596;165597 165590 14 INHEGEVNRAR Unmodified 1293.6538 0.6537951 2615;2169 Q09028;Q16576 RBBP4;RBBP7 Histone-binding protein RBBP4;Histone-binding protein RBBP7 no no 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8 3.46 4 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6.7687 6.0813 2;3 3.5403E-44 8154 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 210.08 111.62 630370000 418600000 7457300 1319700 7788900 7754100 5669000 10895000 10804000 15443000 13026000 29700000 22381000 21010000 18547000 39974000 24619 2169;2615 22461 207352;207353;207354;207355;207356;207357;207358;207359;207360;207361;207362;207363;207364;207365;207366;207367 165598;165599;165600;165601;165602;165603;165604;165605;165606;165607;165608 165602 10 INHERNELQQTINK Unmodified 1735.8965 0.89654457 214 O14777 NDC80 Kinetochore protein NDC80 homolog yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 24.777 25.454 3 0.0010962 25787 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.569 45.095 21598000 0 0 0 0 0 0 0 0 0 0 0 8175300 0 0 13422000 24620 214 22462 207368;207369 165609;165610 165609 2 INHLEYEDQYK Unmodified 1450.6729 0.67285879 382 O60216 RAD21 Double-strand-break repair protein rad21 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.64 3.88 5 1 8 1 3 2 1 2 1 2 1 1 38.41 36.437 2;3 8.6486E-05 45856 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 132.78 118.57 213750000 14721000 77771000 56311000 5573900 0 31932000 0 5633800 11284000 0 4495700 0 0 0 6028500 24621 382 22463 207370;207371;207372;207373;207374;207375;207376;207377;207378;207379;207380;207381;207382;207383 165611;165612;165613;165614;165615;165616;165617;165618;165619 165619 8 INHLEYEDQYKDDNFGEGNDGGILDDK Unmodified 3112.3534 0.35338173 382 O60216 RAD21 Double-strand-break repair protein rad21 homolog yes yes 0 0 1 By MS/MS 2 0 1 1 75.807 67.676 4 8.1365E-07 89347 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.622 52.215 16050000 16050000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24622 382 22464 207384 165620 165620 1 INHSNNAIVKPPEMTPQAAAK Unmodified 2230.1528 0.15283561 3583 Q8WXA9 SREK1 Splicing regulatory glutamine/lysine-rich protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 2 1 1 1 1 1 1 1 1 1 48.316 47.698 3;4 3.1601E-11 67548 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.644 55.443 138420000 23960000 0 0 8740700 0 13564000 6725700 9421900 7997900 0 27689000 14268000 0 12238000 13816000 24623 3583 22465 207385;207386;207387;207388;207389;207390;207391;207392;207393;207394;207395 165621;165622;165623;165624 165622 1 INHTASENEEFNK Unmodified 1531.6903 0.69029976 4301 Q9GZR1 SENP6 Sentrin-specific protease 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.71 3.81 2 1 4 2 1 1 1 1 1 19.029 17.586 3 0.00087314 23214 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 57.034 45.989 49833000 0 27629000 5366600 4450300 0 4727800 0 4382900 3276900 0 0 0 0 0 0 24624 4301 22466 207396;207397;207398;207399;207400;207401;207402 165625;165626;165627;165628 165626 3 INIILSETDRDPLQVV Unmodified 1823.9993 0.9992783 4306 Q9GZT8 NIF3L1 NIF3-like protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 95.518 87.388 2 0.0032634 112939 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.89 84.149 17465000 17465000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24625 4306 22467 207403 165629 165629 1 INIPPPSVNRTEIVFTGEK Unmodified 2110.1423 0.14225415 2033 Q00341 HDLBP Vigilin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 77.496 77.638 3 0.00018624 89331 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 39.237 28.548 92327000 0 0 0 0 0 9835300 3826500 6483100 6613300 13302000 0 12285000 6556400 9038700 24386000 24626 2033 22468 207404;207405;207406;207407;207408;207409;207410;207411;207412 165630;165631;165632;165633;165634;165635;165636;165637;165638;165639;165640;165641 165635 11 INIPPQR Unmodified 836.48684 0.48683634 2263 Q13283 G3BP1 Ras GTPase-activating protein-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 1 1 2 1 2 1 1 2 2 2 35.643 35.881 2 0.02563 39714 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 80.377 55.379 164980000 0 0 0 11172000 10540000 14292000 0 13360000 7369100 23563000 13402000 12340000 18270000 14085000 26591000 24627 2263 22469 207413;207414;207415;207416;207417;207418;207419;207420;207421;207422;207423;207424;207425;207426;207427;207428 165642;165643;165644;165645;165646;165647;165648;165649;165650;165651 165644 10 INIRVLDPFTIK Unmodified 1427.85 0.85003529 1249 P29401 TKT Transketolase yes yes 0 0 1 By MS/MS 2 0 1 1 95.369 90.504 3 0.0026114 112253 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.435 60.031 9772800 0 9772800 0 0 0 0 0 0 0 0 0 0 0 0 0 24628 1249 22470 207429 165652 165652 1 INISEGNCPER Unmodified 1287.5877 0.58774895 2521;2520 Q15365;Q15366;P57721 PCBP1;PCBP2;PCBP3 Poly(rC)-binding protein 1;Poly(rC)-binding protein 2;Poly(rC)-binding protein 3 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.127 32.313 2 1.9364E-47 34010 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 210.6 198.44 8960400000 0 0 0 412890000 484130000 682780000 655400000 647630000 465060000 791010000 1013800000 903760000 877520000 721190000 1305200000 24629 2520;2521 22471 207430;207431;207432;207433;207434;207435;207436;207437;207438;207439;207440;207441 165653;165654;165655;165656;165657;165658;165659;165660;165661;165662;165663;165664;165665;165666;165667;165668 165658 16 INLEAAELGEISDIHTK Unmodified 1851.9578 0.95780742 4897 Q9UHD2 TBK1 Serine/threonine-protein kinase TBK1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 84.638 79.516 3 4.3198E-10 100324 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.9 95.263 84554000 11538000 69191000 3824900 0 0 0 0 0 0 0 0 0 0 0 0 24630 4897 22472 207442;207443;207444 165669;165670;165671 165669 2 INLIAPPR Unmodified 892.54944 0.54943659 804 P05198 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.3 60.406 2 0.010545 67765 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.307 57.56 281810000 0 0 0 15601000 12238000 18069000 18704000 17417000 13649000 22773000 37132000 35432000 21010000 26832000 42949000 24631 804 22473 207445;207446;207447;207448;207449;207450;207451;207452;207453;207454;207455;207456 165672;165673;165674;165675;165676;165677;165678;165679;165680;165681;165682 165675 11 INLIDLAGSER Unmodified 1199.651 0.65100113 2492 Q15058 KIF14 Kinesin-like protein KIF14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.509 79.57 2 0.0052215 92018 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 70.1 41.182 59849000 0 0 0 3283100 4196800 4370500 4152400 5016500 3921700 4948700 5136200 7803100 4066700 5483200 7470500 24632 2492 22474 207457;207458;207459;207460;207461;207462;207463;207464;207465;207466;207467;207468 165683;165684;165685;165686;165687;165688;165689;165690;165691;165692;165693;165694 165683 12 INLNLIYDHNPK Unmodified 1452.7725 0.77251325 624 O95163 IKBKAP Elongator complex protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 70.607 71.042 3 0.024602 81048 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 26.124 12.72 14877000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14877000 24633 624 22475 207469 165695 165695 1 INLQGDIVDR Unmodified 1141.6091 0.60913632 1361 P35611 ADD1 Alpha-adducin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 57.79 58.094 2 0.0023779 66082 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 84.213 26.253 73994000 0 0 0 0 0 12263000 0 0 0 6339100 8949000 13397000 8417900 5573700 19054000 24634 1361 22476 207470;207471;207472;207473;207474;207475;207476;207477;207478 165696;165697;165698;165699;165700;165701;165702;165703;165704;165705;165706 165698 11 INLQQQPPPLQIK Unmodified 1515.8773 0.87731267 592 O94842 TOX4 TOX high mobility group box family member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 1 1 2 2 2 2 2 2 2 73.387 73.445 2;3 4.7031E-14 84027 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 143.7 128.11 498690000 0 0 0 23006000 29515000 30894000 28715000 23970000 39908000 51169000 49747000 51731000 45556000 45128000 79354000 24635 592 22477 207479;207480;207481;207482;207483;207484;207485;207486;207487;207488;207489;207490;207491;207492;207493;207494;207495;207496;207497;207498;207499;207500 165707;165708;165709;165710;165711;165712;165713;165714;165715;165716;165717;165718;165719 165710 12 INLSTLK Unmodified 787.48035 0.48035398 2867;5 Q6BDS2;A0JNW5 UHRF1BP1;UHRF1BP1L UHRF1-binding protein 1;UHRF1-binding protein 1-like no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching 7 3.87 3 5 1 1 1 1 1 1 1 1 51.467 49.271 2 0.031632 56107 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 73.637 4.5439 192160000 42466000 28826000 1898100 0 20489000 0 0 23500000 20441000 0 0 0 31408000 23136000 0 24636 2867;5 22478 207501;207502;207503;207504;207505;207506;207507;207508 165720;165721 165721 2 INLSVLGPATR Unmodified 1139.6663 0.66625727 2375 Q14147 DHX34 Probable ATP-dependent RNA helicase DHX34 yes yes 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 74.944 74.998 2 0.009613 86479 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 50.353 26.199 34889000 0 0 0 2559400 2490400 3792000 2369800 2224900 0 4655700 3717700 3654200 3079500 2322600 4023000 24637 2375 22479 207509;207510;207511;207512;207513;207514;207515;207516;207517;207518;207519 165722;165723 165723 2 INMLVIELK Oxidation (M) 1087.6311 0.63111731 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 1 0 By MS/MS 2 0 1 1 81.819 73.688 2 0.016616 96841 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.827 46.215 24513000 24513000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24638 2392 22480 207520 165724;165725 165725 3908 2 INMLVIELK Unmodified 1071.6362 0.63620269 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS 2 0 1 1 91.899 83.768 2 0.0077063 108649 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 99.802 99.802 16485000 16485000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24639 2392 22480 207521 165726 165726 1 INMMLANLYK Unmodified 1209.625 0.62498608 4944 Q9UJX3 ANAPC7 Anaphase-promoting complex subunit 7 yes yes 0 0 0 By MS/MS 2 0 1 1 87.803 79.672 2 0.024838 103763 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.738 48.608 5967200 5967200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24640 4944 22481 207522 165727 165727 1 INMNGINNSSGMVDAR Oxidation (M) 1707.7669 0.7668523 2585 Q15819 UBE2V2 Ubiquitin-conjugating enzyme E2 variant 2 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.5 1.94 1 15 1 1 1 1 1 2 2 2 1 2 2 43.395 43.271 2 3.169E-32 44600 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 150.68 126.34 80958000 0 12916000 0 0 2158900 6588100 3158600 0 0 10849000 11414000 4454400 3943100 8245200 17230000 24641 2585 22482 207523;207524;207525;207526;207527;207528;207529;207530;207531;207532;207533;207534;207535;207536;207537;207538 165728;165729;165730;165731;165732;165733;165734;165735;165736;165737;165738;165739;165740;165741 165733 4232;4233 14 INMNGINNSSGMVDAR Unmodified 1691.7719 0.77193768 2585 Q15819 UBE2V2 Ubiquitin-conjugating enzyme E2 variant 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 58.247 57.319 2 3.0123E-38 72403 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.99 111.75 74296000 0 20304000 0 0 0 8528500 0 0 0 0 10730000 0 0 8266900 26466000 24642 2585 22482 207539;207540;207541;207542;207543;207544 165742;165743;165744;165745;165746;165747;165748 165744 7 INMNGINNSSGMVDAR 2 Oxidation (M) 1723.7618 0.76176692 2585 Q15819 UBE2V2 Ubiquitin-conjugating enzyme E2 variant 2 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 2 1 28.905 29.423 2 1.3081E-15 30727 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 102.62 88.386 26815000 0 0 0 0 0 0 0 0 0 5698200 0 8439100 0 0 12678000 24643 2585 22482 207545;207546;207547;207548;207549;207550;207551 165749;165750;165751;165752;165753;165754 165752 4232;4233 6 INMNGINNSSGMVDARSIPVLAK Unmodified 2400.2253 0.22534862 2585 Q15819 UBE2V2 Ubiquitin-conjugating enzyme E2 variant 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 85.553 79.1 3 0.0001952 100347 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.278 46.957 35034000 13792000 21242000 0 0 0 0 0 0 0 0 0 0 0 0 0 24644 2585 22483 207552;207553 165755;165756;165757 165755 3 INMNGVNSSNGVVDPR Oxidation (M) 1687.7948 0.79478161 2279 Q13404 UBE2V1 Ubiquitin-conjugating enzyme E2 variant 1 yes yes 0 1 0 By MS/MS 10 0 1 1 36.346 36.353 2 0.00019239 40243 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 67.997 50.561 8901900 0 0 0 0 0 8901900 0 0 0 0 0 0 0 0 0 24645 2279 22484 207554 165758 165758 3710 1 INMNGVNSSNGVVDPR Unmodified 1671.7999 0.79986699 2279 Q13404 UBE2V1 Ubiquitin-conjugating enzyme E2 variant 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 52.058 51.535 2 1.1549E-27 57331 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 166.04 150.47 111490000 0 10856000 0 4382200 0 11982000 0 0 0 12312000 13523000 18674000 0 11255000 28505000 24646 2279 22484 207555;207556;207557;207558;207559;207560;207561;207562;207563;207564 165759;165760;165761;165762;165763;165764;165765;165766;165767;165768;165769 165764 11 INMNGVNSSNGVVDPRAISVLAK Unmodified 2354.2376 0.23762787 2279 Q13404 UBE2V1 Ubiquitin-conjugating enzyme E2 variant 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 85.604 79.152 3 0.00011085 101154 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.902 38.759 37083000 16276000 20807000 0 0 0 0 0 0 0 0 0 0 0 0 0 24647 2279 22485 207565;207566 165770;165771 165771 2 INMVEELEK Unmodified 1103.5533 0.55326092 2485 Q15046 KARS Lysine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 66.014 65.148 2 0.00052953 83773 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.68 75.197 352530000 0 198430000 3557600 6184400 5172300 8180500 5376300 6582000 6325900 10690000 18317000 19598000 7760300 14804000 41549000 24648 2485 22486 207567;207568;207569;207570;207571;207572;207573;207574;207575;207576;207577;207578;207579;207580;207581 165772;165773;165774;165775;165776;165777;165778;165779;165780;165781;165782;165783;165784;165785;165786;165787 165775 16 INNAAFEAVVVTNTIPQEDK Unmodified 2172.1063 0.10626257 957 P11908 PRPS2 Ribose-phosphate pyrophosphokinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 2 2 2 2 2 2 2 2 1 1 82.934 83.036 2;3 4.2693E-09 95280 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 73.984 65.992 168720000 0 0 0 0 6769700 18335000 7290600 11279000 9614900 20494000 22917000 24413000 0 12452000 35154000 24649 957 22487 207582;207583;207584;207585;207586;207587;207588;207589;207590;207591;207592;207593;207594;207595;207596;207597;207598;207599 165788;165789;165790;165791;165792;165793;165794;165795;165796;165797;165798 165795 11 INNEHVIDATLTGGPAR Unmodified 1776.9119 0.91186028 202 O14686 KMT2D Histone-lysine N-methyltransferase 2D yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 56.332 56.536 3 0.0028571 63328 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 41.323 29.3 75322000 0 0 0 0 3983100 5411300 5884200 5598400 0 0 12865000 12306000 13022000 5357200 10894000 24650 202 22488 207600;207601;207602;207603;207604;207605;207606;207607;207608 165799;165800;165801;165802;165803 165802 3 INNFEPNCLR Unmodified 1275.603 0.60300508 3180 Q86W92 PPFIBP1 Liprin-beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 51.785 51.941 2 0.00089427 58835 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 117.04 93.607 237990000 0 0 0 10632000 14694000 13770000 0 17900000 9752100 26147000 32353000 33209000 25416000 19970000 34145000 24651 3180 22489 207609;207610;207611;207612;207613;207614;207615;207616;207617;207618;207619 165804;165805;165806;165807;165808;165809;165810;165811;165812;165813;165814;165815 165810 12 INNFSADIK Unmodified 1020.524 0.52400971 986 P13797 PLS3 Plastin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 46.537 45.255 2 0.0036001 50821 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 109.48 75.306 2911200000 119650000 1988000000 53285000 32674000 24182000 75293000 43932000 36622000 30963000 59868000 82225000 78830000 50088000 63388000 172200000 24652 986 22490 207620;207621;207622;207623;207624;207625;207626;207627;207628;207629;207630;207631;207632;207633;207634;207635 165816;165817;165818;165819;165820;165821;165822;165823;165824;165825;165826;165827;165828;165829;165830;165831;165832 165820 17 INNVPAEGENEVNNELANR Unmodified 2094.993 0.99302373 4654 Q9NUQ9 FAM49B Protein FAM49B yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 1 2 2 2 1 2 2 2 2 2 2 59.149 59.285 2;3 2.0147E-17 66657 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 128.22 115.86 375160000 0 0 0 16450000 4459400 38560000 28482000 22660000 8964100 34701000 44340000 31622000 33389000 27867000 83665000 24653 4654 22491 207636;207637;207638;207639;207640;207641;207642;207643;207644;207645;207646;207647;207648;207649;207650;207651;207652;207653;207654;207655;207656;207657 165833;165834;165835;165836;165837;165838;165839;165840;165841;165842;165843;165844;165845;165846;165847;165848 165843 11 INNWIVQLSK Unmodified 1213.6819 0.68190733 2590 Q15853 USF2 Upstream stimulatory factor 2 no no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 79.951 80.027 2 0.016273 92405 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 60.064 34.256 29911000 0 0 0 0 1864400 5270100 2635500 0 4857500 3932800 3535700 6308400 1506400 0 0 24654 2590 22492 207658;207659;207660;207661;207662;207663;207664;207665 165849;165850 165849 2 INPDEREEMK Unmodified 1259.5816 0.58160094 1541 P48507 GCLM Glutamate--cysteine ligase regulatory subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 18.099 17.367 3 0.020504 24320 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.076 52.17 452330000 32066000 238330000 16034000 9373500 7907300 26086000 11974000 9820500 6123600 0 18587000 23095000 0 18303000 34625000 24655 1541 22493 207666;207667;207668;207669;207670;207671;207672;207673;207674;207675;207676;207677;207678 165851;165852;165853;165854 165852 1 INPDEREEMK Oxidation (M) 1275.5765 0.57651556 1541 P48507 GCLM Glutamate--cysteine ligase regulatory subunit yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS 3.8 3.12 3 1 1 1 2 1 1 10.736 7.5471 3 0.022472 9318 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 51.445 38.045 198000000 19955000 171120000 6929300 0 0 0 0 0 0 0 0 0 0 0 0 24656 1541 22493 207679;207680;207681;207682;207683 165855;165856;165857;165858 165856 4 INPDGSQSVVEVPYAR Unmodified 1729.8635 0.8635131 5095 Q9Y2B0 CNPY2 Protein canopy homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.012 66.096 2 7.1045E-29 75663 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 174.46 165.46 356890000 0 0 0 7286200 8578600 9937800 13114000 11041000 7619500 19730000 65678000 58002000 15873000 42579000 97455000 24657 5095 22494 207684;207685;207686;207687;207688;207689;207690;207691;207692;207693;207694;207695 165859;165860;165861;165862;165863;165864;165865;165866;165867;165868;165869;165870 165864 12 INPELNQK Unmodified 954.51345 0.51344502 1688;1505 P46734;P52564 MAP2K3;MAP2K6 Dual specificity mitogen-activated protein kinase kinase 3;Dual specificity mitogen-activated protein kinase kinase 6 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 22.302 22.495 2 0.0049581 22984 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 130.04 91.888 491540000 0 0 0 28325000 26214000 40721000 34945000 25931000 28029000 58912000 60786000 67837000 46079000 0 73759000 24658 1505;1688 22495 207696;207697;207698;207699;207700;207701;207702;207703;207704;207705;207706 165871;165872;165873;165874;165875;165876;165877;165878;165879;165880;165881 165879 9 INPENSK Unmodified 800.40283 0.40283194 5087 Q9Y266 NUDC Nuclear migration protein nudC yes yes 0 0 0 By MS/MS By MS/MS 1.67 0.471 1 2 2 1 40.203 39.733 2 0.012551 93415 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 124.12 49.686 1823100000 85326000 1737800000 0 0 0 0 0 0 0 0 0 0 0 0 0 24659 5087 22496 207707;207708;207709 165882;165883 165883 1 INPETVAEWK Unmodified 1185.603 0.60298831 2835 Q5W0B1 RNF219 RING finger protein 219 yes yes 0 0 0 By MS/MS 10 0 1 1 63.796 63.994 2 0.044068 72310 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 37.344 22.678 7804800 0 0 0 0 0 0 0 0 0 0 0 0 0 7804800 0 24660 2835 22497 207710 165884 165884 1 INPETVAEWKK Unmodified 1313.698 0.69795133 2835 Q5W0B1 RNF219 RING finger protein 219 yes yes 0 0 1 By MS/MS 2 0 1 1 61.657 53.401 3 0.039652 72244 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 36.679 23.278 13937000 13937000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24661 2835 22498 207711 165885 165885 1 INPETVNLSI Unmodified 1098.5921 0.59208927 3489 Q8TCG1 KIAA1524 Protein CIP2A yes yes 0 0 0 By MS/MS 2 0 1 1 83.847 79.127 2 0.04617 98354 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 52.937 36.788 25576000 0 25576000 0 0 0 0 0 0 0 0 0 0 0 0 0 24662 3489 22499 207712 165886 165886 1 INPICNDHYR Unmodified 1300.5983 0.59825406 3905 Q96KB5 PBK Lymphokine-activated killer T-cell-originated protein kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32.656 31.817 3 0.0052608 44754 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.676 54.59 199750000 36311000 10232000 7664600 8184000 9870900 15377000 8336400 8861500 7602400 14849000 13861000 19944000 8221500 8000800 22433000 24663 3905 22500 207713;207714;207715;207716;207717;207718;207719;207720;207721;207722;207723;207724;207725;207726;207727 165887;165888;165889;165890;165891;165892;165893;165894 165890 6 INPICNDHYRSVYQK Unmodified 1905.9156 0.91556545 3905 Q96KB5 PBK Lymphokine-activated killer T-cell-originated protein kinase yes yes 0 0 1 By MS/MS 2 0 1 1 51.668 43.707 3 0.041819 60358 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 39.509 22.431 12664000 12664000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24664 3905 22501 207728 165895 165895 0 INPLPGGR Unmodified 822.47119 0.47118627 3308 Q8N163 CCAR2 Cell cycle and apoptosis regulator protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34 34.182 2 0.017174 37548 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 66.087 43.956 294690000 0 0 0 18514000 17826000 24156000 20380000 17212000 16375000 24975000 33706000 33927000 27843000 20701000 39079000 24665 3308 22502 207729;207730;207731;207732;207733;207734;207735;207736;207737;207738;207739;207740 165896;165897;165898;165899 165896 4 INPNTAYQK Unmodified 1047.5349 0.53490874 2748;2888 Q6IN85;Q5MIZ7 SMEK1;SMEK2 Serine/threonine-protein phosphatase 4 regulatory subunit 3A;Serine/threonine-protein phosphatase 4 regulatory subunit 3B no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20.95 20.397 2 5.335E-06 25154 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 157.33 77.616 372230000 12230000 208450000 0 8328800 8441200 11044000 12599000 9826600 4364700 15161000 23790000 0 19321000 17268000 21403000 24666 2888;2748 22503 207741;207742;207743;207744;207745;207746;207747;207748;207749;207750;207751;207752;207753;207754 165900;165901;165902;165903;165904;165905;165906;165907;165908;165909;165910;165911;165912;165913 165903 14 INPSSMFDVHVK Oxidation (M) 1388.6758 0.67583567 939 P11216 PYGB Glycogen phosphorylase, brain form yes yes 0 1 0 By MS/MS 2 0 1 1 62.729 54.461 3 0.0043735 73740 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.122 44.203 19959000 19959000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24667 939 22504 207755 165914;165915;165916 165916 1222 3 INPTSSLYK Unmodified 1021.5444 0.5444108 530 O75665 OFD1 Oral-facial-digital syndrome 1 protein yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 41.337 41.521 2 0.0079891 46957 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 70.919 26.472 36340000 0 0 0 2014700 3273300 0 2580200 3515600 3403600 0 3531000 5981300 4218100 0 7821900 24668 530 22505 207756;207757;207758;207759;207760;207761;207762;207763;207764 165917;165918;165919;165920;165921 165921 5 INPYMSSPCHIEMILTEK 2 Oxidation (M) 2194.0108 0.010847322 1076 P18621 RPL17 60S ribosomal protein L17 yes yes 0 2 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 77.172 77.274 3 1.1475E-11 88765 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.385 85.05 353400000 0 0 0 0 11643000 28138000 0 27095000 28066000 54061000 43582000 60159000 0 36764000 63888000 24669 1076 22506 207765;207766;207767;207768;207769;207770;207771;207772;207773 165922;165923;165924;165925;165926;165927;165928 165924 1548;1549 7 INPYMSSPCHIEMILTEK Oxidation (M) 2178.0159 0.0159327 1076 P18621 RPL17 60S ribosomal protein L17 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 78.702 78.878 3 7.4356E-08 90797 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.661 69.256 62960000 0 0 0 0 0 0 0 9692300 0 11918000 0 16761000 0 0 24588000 24670 1076 22506 207774;207775;207776;207777 165929;165930;165931;165932;165933 165930 1548;1549 5 INQDPQVMLAPLISIALK Oxidation (M) 1979.1125 0.11253392 1380 P36871 PGM1 Phosphoglucomutase-1 yes yes 0 1 0 By MS/MS By MS/MS 2.33 0.471 4 2 1 5 99.506 95.338 2;3 1.8877E-07 118040 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.45 88.503 60977000 0 60977000 0 0 0 0 0 0 0 0 0 0 0 0 0 24671 1380 22507 207778;207779;207780;207781;207782;207783 165934;165935;165936;165937;165938 165936 2142 5 INQDPQVMLAPLISIALK Unmodified 1963.1176 0.1176193 1380 P36871 PGM1 Phosphoglucomutase-1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 101.95 96.506 3 8.9699E-05 121088 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.129 54.955 29662000 17790000 11872000 0 0 0 0 0 0 0 0 0 0 0 0 0 24672 1380 22507 207784;207785;207786 165939;165940 165940 2 INQEATPGDIVEK Unmodified 1412.7147 0.7147236 3089 Q7Z401 DENND4A C-myc promoter-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 42.838 42.921 2 0.0082864 48091 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 44.639 27.527 26064000 0 0 0 0 3298600 0 4531500 3755700 0 3558700 0 0 5825500 5093600 0 24673 3089 22508 207787;207788;207789;207790;207791;207792 165941;165942;165943;165944 165943 4 INQGWLDSSR Unmodified 1174.5731 0.57308516 3735 Q96AC1 FERMT2 Fermitin family homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 50.2 49.065 2 0.0014693 54679 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 90.906 45.226 117820000 3033000 0 0 0 0 25929000 0 10865000 0 21761000 0 0 0 20192000 36039000 24674 3735 22509 207793;207794;207795;207796;207797;207798;207799 165945;165946;165947;165948;165949;165950;165951;165952;165953;165954 165953 10 INQGWLDSSRSLMEQDVK Unmodified 2105.0212 0.021152733 3735 Q96AC1 FERMT2 Fermitin family homolog 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 82.92 76.502 3 2.5063E-08 98136 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.796 82.674 38096000 21562000 16535000 0 0 0 0 0 0 0 0 0 0 0 0 0 24675 3735 22510 207800;207801 165955;165956;165957 165957 2 INQGWLDSSRSLMEQDVK Oxidation (M) 2121.0161 0.016067355 3735 Q96AC1 FERMT2 Fermitin family homolog 2 yes yes 0 1 1 By MS/MS 2 0 1 1 73.971 65.84 3 5.4079E-05 87166 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.558 61.809 13217000 13217000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24676 3735 22510 207802 165958 165958 5306 1 INQILMEK Unmodified 987.5423 0.54230231 2860 Q68E01 INTS3 Integrator complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.8 3.92 2 3 1 1 1 1 1 47.786 45.255 2 0.0052189 59602 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 144.38 79.618 101050000 6290100 72038000 0 0 0 0 0 0 0 6447800 0 0 0 6286900 9990800 24677 2860 22511 207803;207804;207805;207806;207807 165959;165960;165961;165962 165961 4 INQILMEK Oxidation (M) 1003.5372 0.53721693 2860 Q68E01 INTS3 Integrator complex subunit 3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 39.7 34.64 2 0.035053 45227 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.525 34.13 59768000 3475600 53969000 2323300 0 0 0 0 0 0 0 0 0 0 0 0 24678 2860 22511 207808;207809;207810 165963 165963 1 INQIQMK Unmodified 873.47422 0.47422274 2332;2331 Q13619;Q13620 CUL4A;CUL4B Cullin-4A;Cullin-4B no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 26.749 26.294 2 0.015385 27806 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 118.06 45.017 812930000 0 570890000 0 9778300 11717000 32146000 16123000 14372000 8270700 24718000 24917000 26784000 17175000 21068000 34971000 24679 2331;2332 22512 207811;207812;207813;207814;207815;207816;207817;207818;207819;207820;207821;207822;207823;207824 165964;165965;165966;165967;165968;165969;165970;165971;165972;165973;165974;165975;165976 165968 12 INQIQMK Oxidation (M) 889.46914 0.46913736 2332;2331 Q13619;Q13620 CUL4A;CUL4B Cullin-4A;Cullin-4B no no 0 1 0 By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 11.032 10.57 2 0.020948 12179 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.28 50.648 358620000 13844000 287010000 0 3570300 2601000 6104100 5413100 3303100 2884400 7406900 0 6707800 5410100 5177800 9188300 24680 2331;2332 22512 207825;207826;207827;207828;207829;207830;207831;207832;207833;207834;207835;207836;207837 165977;165978 165977 2 INQISLDESGEHMGVCSEDGK Unmodified 2303.9998 0.99982494 1594 P49754 VPS41 Vacuolar protein sorting-associated protein 41 homolog yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 63.543 58.207 3 7.2793E-09 74662 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.088 74.211 24712000 0 24712000 0 0 0 0 0 0 0 0 0 0 0 0 0 24681 1594 22513 207838;207839 165979;165980;165981;165982 165979 4 INQLCSQTK Unmodified 1090.5441 0.54409322 2627 Q16666 IFI16 Gamma-interferon-inducible protein 16 yes yes 0 0 0 By MS/MS 10 0 1 1 15.678 15.839 2 0.025164 15370 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 75.043 37.884 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24682 2627 22514 207840 165983 165983 1 INQLSEENGDLSFK Unmodified 1592.7682 0.76821574 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 64.064 61.478 2 7.4398E-117 77788 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 229.64 198.14 205720000 0 184490000 0 0 0 0 12410000 8820000 0 0 0 0 0 0 0 24683 2459 22515 207841;207842;207843;207844;207845;207846;207847;207848;207849;207850;207851;207852 165984;165985;165986;165987;165988;165989;165990;165991;165992;165993;165994 165987 11 INQLYEQAK Unmodified 1105.5768 0.57677356 3735 Q96AC1 FERMT2 Fermitin family homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.549 30.74 2 0.0020422 33841 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 140.09 50.794 226770000 0 0 0 10310000 8460300 27152000 16136000 0 8480200 27252000 22690000 27049000 19369000 20897000 38973000 24684 3735 22516 207853;207854;207855;207856;207857;207858;207859;207860;207861;207862;207863;207864 165995;165996;165997;165998;165999;166000;166001;166002;166003;166004;166005 166005 11 INQMATAPDSQR Unmodified 1330.6299 0.62994811 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 24.457 24.181 2 5.4765E-09 25730 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 141.88 106.58 105330000 0 7784700 0 0 0 14184000 0 0 0 13902000 14192000 14916000 14509000 0 25848000 24685 5071 22517 207865;207866;207867;207868;207869;207870;207871 166006;166007;166008;166009;166010;166011;166012;166013 166007 6 INQMATAPDSQRLK Oxidation (M) 1587.8039 0.80388973 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 27.757 23.465 3 0.00035593 30006 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 78.529 70.425 198890000 65008000 80579000 53299000 0 0 0 0 0 0 0 0 0 0 0 0 24686 5071 22518 207872;207873;207874;207875 166014;166015;166016;166017;166018 166018 6445 5 INQMATAPDSQRLK Unmodified 1571.809 0.80897511 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 38.354 33.352 3 0.00024916 46075 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.699 71.154 295820000 134730000 126960000 34121000 0 0 0 0 0 0 0 0 0 0 0 0 24687 5071 22518 207876;207877;207878 166019;166020;166021;166022 166021 3 INQPELETR Unmodified 1098.5669 0.56693715 2724 Q5FWF5 ESCO1 N-acetyltransferase ESCO1 yes yes 0 0 0 By MS/MS 10 0 1 1 33.315 34.05 2 0.0029054 36816 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 135.83 86.734 12281000 0 0 0 0 0 0 0 0 0 0 0 12281000 0 0 0 24688 2724 22519 207879 166023 166023 1 INQQEEPGFEVITR Unmodified 1658.8264 0.82639932 3485 Q8TC07 TBC1D15 TBC1 domain family member 15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 1 2 2 2 2 2 2 67.196 67.274 2;3 2.5763E-50 76947 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 220.5 184.17 358830000 0 0 0 19063000 16045000 33005000 26266000 23040000 13242000 38583000 36096000 35692000 33958000 29162000 54675000 24689 3485 22520 207880;207881;207882;207883;207884;207885;207886;207887;207888;207889;207890;207891;207892;207893;207894;207895;207896;207897;207898;207899;207900;207901;207902 166024;166025;166026;166027;166028;166029;166030;166031;166032;166033;166034;166035;166036;166037;166038;166039 166037 12 INQQENSLTLEK Unmodified 1415.7256 0.72562264 1575 P49454 CENPF Centromere protein F yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 39.264 39.542 2 0.0054663 42755 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.412 44.604 44632000 0 0 0 0 0 3528200 4482900 0 4579100 6837400 5556800 0 7131000 4763700 7753400 24690 1575 22521 207903;207904;207905;207906;207907;207908;207909;207910 166040;166041 166040 2 INQVFHGSCITEGNELTK Unmodified 2045.984 0.98403894 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.05 3.77 6 2 13 4 2 2 1 1 1 1 1 1 1 1 1 2 1 1 61.858 59.516 2;3 2.3124E-132 79772 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 224.86 204.77 4881100000 2528800000 1161800000 648100000 17447000 17762000 38555000 19504000 22508000 29356000 39770000 62904000 57043000 43368000 83108000 111020000 24691 1986 22522 207911;207912;207913;207914;207915;207916;207917;207918;207919;207920;207921;207922;207923;207924;207925;207926;207927;207928;207929;207930;207931 166042;166043;166044;166045;166046;166047;166048;166049;166050;166051;166052;166053;166054;166055;166056;166057;166058;166059;166060;166061;166062 166052 20 INRDLFDFSTR Unmodified 1382.6943 0.69426293 4174 Q9BV38 WDR18 WD repeat-containing protein 18 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 71.846 72.028 3 0.0071794 83284 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 40.475 34.394 34830000 0 0 0 0 0 6801600 0 0 0 0 3442300 0 6819200 4276100 13491000 24692 4174 22523 207932;207933;207934;207935;207936 166063;166064;166065 166065 3 INRTQAEEMLSGK Unmodified 1475.7402 0.74022685 157 O00459 PIK3R2 Phosphatidylinositol 3-kinase regulatory subunit beta yes yes 0 0 1 By MS/MS 2 0 1 1 57.18 49 3 2.2559E-08 66900 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.163 56.357 38117000 38117000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24693 157 22524 207937 166066;166067 166067 2 INRVNELNSVK Unmodified 1284.715 0.71499837 2973 Q6ULP2 AFTPH Aftiphilin yes yes 0 0 1 By MS/MS 2 0 2 2 38.063 31.565 2;3 0.0098743 43941 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.843 34.734 51984000 51984000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24694 2973 22525 207938;207939 166068;166069 166069 2 INSAPPTETK Unmodified 1056.5451 0.54513908 4605 Q9NRL2 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.294 15.465 2 0.0023379 14979 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 84.615 44.547 41739000 0 0 0 2798400 1801400 1818900 3115000 2303100 1450000 3248100 4699700 4738900 5269400 3976800 6519200 24695 4605 22526 207940;207941;207942;207943;207944;207945;207946;207947;207948;207949;207950;207951 166070;166071;166072;166073;166074;166075;166076;166077;166078 166077 9 INSDDSNLYLTASK Unmodified 1539.7417 0.74166663 4265 Q9BZG1 RAB34 Ras-related protein Rab-34 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.84 51.988 2 2.5527E-117 59056 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 208.95 184.1 315680000 0 0 0 14510000 19174000 17088000 21794000 26482000 17743000 32362000 40057000 39991000 28070000 23503000 34906000 24696 4265 22527 207952;207953;207954;207955;207956;207957;207958;207959;207960;207961;207962;207963 166079;166080;166081;166082;166083;166084;166085;166086;166087;166088;166089;166090;166091 166086 13 INSFYAFEVK Unmodified 1216.6128 0.61282471 3515 Q8TED1 GPX8 Probable glutathione peroxidase 8 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 73.875 74.063 2 0.0081592 89461 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.717 27.904 139700000 0 0 0 0 0 0 0 4759400 2380400 7168000 5578300 5988400 0 103650000 10182000 24697 3515 22528 207964;207965;207966;207967;207968;207969;207970;207971 166092;166093;166094;166095;166096;166097 166097 6 INSGPDPR Unmodified 854.42463 0.42463001 4030 Q99590 SCAF11 Protein SCAF11 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 2 2 9.3906 9.5978 2 0.021457 8584 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 61.962 39.033 39098000 0 0 0 0 0 3284800 1036800 952170 3013700 0 6140500 14073000 0 0 10597000 24698 4030 22529 207972;207973;207974;207975;207976;207977;207978;207979;207980 166098;166099;166100 166100 3 INSITVDNCK Unmodified 1162.5652 0.56522259 2055 Q01518 CAP1 Adenylyl cyclase-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 2 1 1 1 31.704 30.462 2 1.9692E-37 38190 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 206.78 144.79 1060100000 32393000 955240000 3708800 10921000 1559800 5116500 2855100 0 2121400 6252800 7536600 0 4426100 8672200 19289000 24699 2055 22530 207981;207982;207983;207984;207985;207986;207987;207988;207989;207990;207991;207992;207993;207994;207995;207996 166101;166102;166103;166104;166105;166106;166107;166108;166109;166110;166111;166112;166113;166114;166115;166116;166117 166104 17 INSNYEFCDTYPAIIVVPTSVK Unmodified 2529.2461 0.24612687 2326 Q13613 MTMR1 Myotubularin-related protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 95.814 90.954 3 0.00077934 112787 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 32.548 29.624 16801000 0 16801000 0 0 0 0 0 0 0 0 0 0 0 0 0 24700 2326 22531 207997 166118 166118 1 INSQREEIER Unmodified 1272.6422 0.64222736 3148 Q86UE8 TLK2 Serine/threonine-protein kinase tousled-like 2 yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 13.583 13.778 3 0.020373 13282 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 34.755 9.9017 88081000 0 0 0 5062100 0 6739200 7105100 8249900 0 10425000 8497700 9962800 10191000 8978800 12869000 24701 3148 22532 207998;207999;208000;208001;208002;208003;208004;208005;208006;208007 166119;166120 166120 2 INSSPNVNTTASGVEDLNIIQVTIPDDDNER Unmodified 3339.6066 0.6066363 1977 P78347 GTF2I General transcription factor II-I yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 89.558 89.596 3 1.4709E-15 104014 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 50.757 48.444 8602800 0 0 0 0 797250 0 0 0 0 4927400 2878100 0 0 0 0 24702 1977 22533 208008;208009;208010 166121;166122;166123 166121 3 INSSPNVNTTASGVEDLNIIQVTIPDDDNERLSK Unmodified 3667.8177 0.81769171 1977 P78347 GTF2I General transcription factor II-I yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 90.946 86.269 3 4.1346E-63 108335 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.09 103.42 91978000 45517000 24384000 22076000 0 0 0 0 0 0 0 0 0 0 0 0 24703 1977 22534 208011;208012;208013;208014 166124;166125;166126;166127 166124 4 INSSTENSDEGLK Unmodified 1392.6369 0.63686721 1238 P28715 ERCC5 DNA repair protein complementing XP-G cells yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 18.228 18.386 2 0.00051086 18875 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 96.229 72.199 83101000 0 0 0 6960200 7535300 8199900 8374200 4833900 5941600 8905300 0 7564500 8693800 6474400 9618000 24704 1238 22535 208015;208016;208017;208018;208019;208020;208021;208022;208023;208024;208025 166128;166129;166130 166130 3 INSTATPDQDRDK Unmodified 1459.6903 0.69029976 4365 Q9H2G2 SLK STE20-like serine/threonine-protein kinase yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 1 1 2 9.3005 9.4344 2;3 1.614E-05 6221 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 77.894 61.545 204020000 0 0 0 14528000 10517000 15256000 13643000 8386600 6841800 15867000 30180000 29232000 15620000 15301000 28651000 24705 4365 22536 208026;208027;208028;208029;208030;208031;208032;208033;208034;208035;208036;208037;208038 166131;166132;166133;166134;166135;166136;166137;166138;166139;166140;166141 166137 5 INSWVESQTNEK Unmodified 1433.6787 0.67867245 1251;1545 P29508;P48594 SERPINB3;SERPINB4 Serpin B3;Serpin B4 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.43 2.06 1 13 1 2 1 1 1 1 1 1 1 1 1 1 1 40.431 40.176 2;3 2.0983E-14 44499 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 187.16 139.97 835980000 0 20290000 0 511970000 19823000 28073000 19928000 25855000 15321000 41976000 39967000 50281000 18816000 20110000 23572000 24706 1251;1545 22537 208039;208040;208041;208042;208043;208044;208045;208046;208047;208048;208049;208050;208051;208052 166142;166143;166144;166145;166146;166147;166148;166149;166150;166151;166152;166153;166154;166155;166156;166157 166150 14 INTDITGAK Unmodified 931.49746 0.4974606 4407 Q9H582 ZNF644 Zinc finger protein 644 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 27.953 28.192 2 0.034406 29248 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 66.504 14.769 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24707 4407 22538 208053;208054 166158;166159 166159 2 INTESSLWSLEPGK Unmodified 1559.7831 0.78313752 3225 Q8IVD9 NUDCD3 NudC domain-containing protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 78.373 78.48 2 2.6841E-05 90282 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.97 88.724 53166000 0 0 0 0 2054600 6739500 2730400 5064200 3718800 4923600 5135700 5183300 0 5961100 11655000 24708 3225 22539 208055;208056;208057;208058;208059;208060;208061;208062;208063;208064 166160;166161;166162;166163;166164;166165;166166;166167;166168;166169;166170 166163 11 INTIAMR Unmodified 817.44801 0.44800799 4257 Q9BZ23 PANK2 Pantothenate kinase 2, mitochondrial yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 33.424 33.612 2 0.04604 37070 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.087 19.736 74185000 0 0 0 13647000 0 19071000 0 0 0 12185000 16258000 13024000 0 0 0 24709 4257 22540 208065;208066;208067;208068;208069 166171 166171 1 INTIFISK Unmodified 934.54877 0.54876789 1089 P19447 ERCC3 TFIIH basal transcription factor complex helicase XPB subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 61.323 60.363 2 0.01661 81436 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 91.853 29.307 64495000 23326000 0 2672400 2548900 2461800 3677700 4086400 0 2763200 5057800 5143400 4945000 4338000 3474200 0 24710 1089 22541 208070;208071;208072;208073;208074;208075;208076;208077;208078;208079;208080;208081 166172;166173;166174;166175;166176 166173 5 INTPLLTPLK Unmodified 1108.6856 0.68559572 584 O94782 USP1 Ubiquitin carboxyl-terminal hydrolase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77.838 76.86 2 0.0065063 98325 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.749 30.962 145750000 28799000 28281000 1827500 3435200 4337300 7139700 5831400 6513500 4270400 8843400 10638000 9206200 6681700 6947700 13003000 24711 584 22542 208082;208083;208084;208085;208086;208087;208088;208089;208090;208091;208092;208093;208094;208095;208096 166177;166178;166179;166180;166181;166182;166183;166184;166185;166186;166187 166182 11 INTQEPEETLDFDFCSTNVINK Unmodified 2613.1905 0.19046248 422 O60671 RAD1 Cell cycle checkpoint protein RAD1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 89.229 83.824 3 0.00095593 105417 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 27.584 21.156 39008000 10321000 28687000 0 0 0 0 0 0 0 0 0 0 0 0 0 24712 422 22543 208097;208098;208099 166188;166189 166188 2 INVDIPEEANQNLSFGATER Unmodified 2216.0709 0.070939697 4468 Q9H9A6 LRRC40 Leucine-rich repeat-containing protein 40 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 1 2 2 2 2 2 2 2 2 2 2 2 80.638 80.718 2;3 3.6123E-61 93431 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 132.44 122.91 260300000 0 0 0 1299400 16772000 21862000 8468800 12355000 15273000 49871000 35707000 31844000 8575000 17002000 41267000 24713 4468 22544 208100;208101;208102;208103;208104;208105;208106;208107;208108;208109;208110;208111;208112;208113;208114;208115;208116;208117;208118;208119;208120;208121;208122 166190;166191;166192;166193;166194;166195;166196;166197;166198;166199;166200;166201;166202;166203;166204 166197 14 INVGIGEIK Unmodified 941.55458 0.55458155 2787 Q5T9L3 WLS Protein wntless homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 63.116 62.025 2 0.013982 69774 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.981 13.263 113550000 24493000 16927000 0 5436000 6058000 0 0 5500800 6118900 8342900 7437500 9684900 7147700 5795400 10609000 24714 2787 22545 208123;208124;208125;208126;208127;208128;208129;208130;208131;208132;208133;208134 166205;166206;166207;166208;166209;166210;166211;166212;166213 166207 9 INVLAAQYQSLLNSYGEPVDDK Unmodified 2436.2173 0.21726958 154 O00429 DNM1L Dynamin-1-like protein yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 90.738 90.865 2 0.0084893 105419 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 39.509 26.882 2646300 0 0 0 0 0 0 0 0 0 1374100 0 0 0 0 1272200 24715 154 22546 208135;208136 166214 166214 1 INVLHKPPYEHPK Unmodified 1570.862 0.86199696 271 O15294 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 32.869 33.193 4 0.028988 36336 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 24.929 18.452 122580000 0 0 0 0 0 19576000 5867200 0 14383000 0 0 23042000 15355000 11947000 32410000 24716 271 22547 208137;208138;208139;208140;208141;208142;208143 166215;166216 166215 2 INVPELPTPDEDNK Unmodified 1579.773 0.77296676 311 O43264 ZW10 Centromere/kinetochore protein zw10 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 74.336 73.404 2 3.2025E-44 91102 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 171.92 147.54 238310000 11703000 147520000 0 0 0 8382200 6694400 3674500 5332300 8068700 10223000 7950100 8838700 8258900 11671000 24717 311 22548 208144;208145;208146;208147;208148;208149;208150;208151;208152;208153;208154;208155 166217;166218;166219;166220;166221;166222;166223;166224;166225;166226 166220 9 INVQNNVDLGQPVK Unmodified 1536.826 0.82600539 2901 Q6NW34 C3orf17 Uncharacterized protein C3orf17 yes yes 0 0 0 By MS/MS 2 0 1 1 62.79 56.896 2 0.001914 73048 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.344 70.091 12926000 0 12926000 0 0 0 0 0 0 0 0 0 0 0 0 0 24718 2901 22549 208156 166227 166227 1 INVSGLTTK Unmodified 931.53385 0.53384611 1049 P17174 GOT1 Aspartate aminotransferase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 43.244 43.549 2 0.010961 49643 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 63.534 35.111 93281000 0 0 0 9496300 0 0 0 0 0 0 0 22768000 0 12254000 48763000 24719 1049 22550 208157;208158;208159;208160 166228;166229;166230;166231 166231 4 INVSGQWEGECNGK Unmodified 1576.694 0.69400493 1499 P46108 CRK Adapter molecule crk yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 50.972 45.651 2 8.9041E-102 59109 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 223.71 207.04 41473000 0 41473000 0 0 0 0 0 0 0 0 0 0 0 0 0 24720 1499 22551 208161;208162 166232 166232 1 INVVNNHQAK Unmodified 1135.6098 0.60980502 4243 Q9BY77 POLDIP3 Polymerase delta-interacting protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.382 12.531 2 0.019709 11219 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 47.657 24.917 40326000 0 0 0 2092800 2085600 2626000 3006100 2880600 2607000 4383300 3808400 4925900 3293000 3325300 5291700 24721 4243 22552 208163;208164;208165;208166;208167;208168;208169;208170;208171;208172;208173;208174 166233;166234;166235;166236;166237;166238;166239;166240 166240 3 INVYYNEAAGNK Unmodified 1354.6517 0.65172941 2350 Q13885 TUBB2A Tubulin beta-2A chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 42.968 43.172 2 2.5937E-05 48753 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 94.297 74.51 124110000 0 0 0 0 8379800 13750000 7424000 11807000 8220200 17150000 0 17926000 0 14637000 24819000 24722 2350 22553 208175;208176;208177;208178;208179;208180;208181;208182;208183;208184 166241;166242;166243;166244;166245;166246 166246 5 INVYYNEATGGK Unmodified 1327.6408 0.64083038 1963 P68371 TUBB4B Tubulin beta-4B chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 46.357 45.082 2 3.1157E-14 57176 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 159.4 137.32 16165000000 10076000 398860000 4176900 774090000 892140000 1000300000 1164200000 1291400000 882340000 1513500000 1578100000 1923200000 1574300000 1271400000 1887100000 24723 1963 22554 208185;208186;208187;208188;208189;208190;208191;208192;208193;208194;208195;208196;208197;208198;208199;208200 166247;166248;166249;166250;166251;166252;166253;166254;166255;166256;166257;166258;166259;166260;166261;166262;166263;166264;166265;166266;166267;166268;166269;166270;166271 166252 25 INVYYNESSSQK Unmodified 1430.6678 0.66777341 4160 Q9BUF5 TUBB6 Tubulin beta-6 chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 38.242 38.017 2 7.3466E-34 41637 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 172.88 156.04 1630300000 0 56897000 0 71055000 92670000 109480000 101070000 142850000 85556000 123760000 157930000 190280000 166360000 118180000 214200000 24724 4160 22555 208201;208202;208203;208204;208205;208206;208207;208208;208209;208210;208211;208212;208213 166272;166273;166274;166275;166276;166277;166278;166279;166280;166281;166282;166283;166284;166285 166283 14 INYTEGR Unmodified 851.41373 0.41373097 829 P06744 GPI Glucose-6-phosphate isomerase yes yes 0 0 0 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 16.716 17.009 2 0.02357 15784 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 92.677 31.182 261580000 0 0 0 0 0 0 5513100 4935900 0 0 61165000 0 0 0 189960000 24725 829 22556 208214;208215;208216;208217 166286 166286 1 IPAAIEELK Unmodified 982.5699 0.56989727 4862 Q9UBW7 ZMYM2 Zinc finger MYM-type protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 63.944 63.119 2 0.0082307 81374 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.709 57.868 136930000 0 75621000 6097400 0 3923900 6738400 4869600 3492100 0 0 7890400 10824000 0 6649500 10820000 24726 4862 22557 208218;208219;208220;208221;208222;208223;208224;208225;208226;208227 166287;166288;166289 166288 3 IPAANILGHENK Unmodified 1275.6935 0.69353465 1205 P26440 IVD Isovaleryl-CoA dehydrogenase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 54.583 48.942 3 0.0020439 66840 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.434 42.29 132990000 99892000 17005000 16093000 0 0 0 0 0 0 0 0 0 0 0 0 24727 1205 22558 208228;208229;208230;208231;208232 166290;166291;166292;166293 166292 4 IPAASAAAMNLASAR Unmodified 1413.7398 0.73983292 5066 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.515 67.598 2 0.00013601 76777 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.831 70.363 133430000 0 0 0 7748000 7593300 8058300 7187900 9688700 6515000 11927000 14016000 14314000 8484300 16844000 21054000 24728 5066 22559 208233;208234;208235;208236;208237;208238;208239;208240;208241;208242;208243;208244 166294;166295;166296;166297;166298;166299;166300;166301;166302;166303;166304 166297 10 IPAASAAAMNLASAR Oxidation (M) 1429.7347 0.73474754 5066 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 2 55.317 55.289 2 1.6625E-05 63479 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 77.597 46.103 69900000 0 0 0 7183900 6334700 0 9887000 8965700 9473300 8301700 0 0 0 19753000 0 24729 5066 22559 208245;208246;208247;208248;208249;208250;208251;208252 166305;166306;166307;166308;166309;166310;166311 166310 6420 5 IPADTFAALK Unmodified 1045.5808 0.5807963 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.054 67.138 2 0.0010435 76962 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 110.41 47.944 1126000000 0 0 0 95467000 66753000 99430000 81447000 61985000 66398000 106700000 124020000 113960000 88838000 66426000 154550000 24730 1518 22560 208253;208254;208255;208256;208257;208258;208259;208260;208261;208262;208263;208264 166312;166313;166314;166315;166316;166317;166318;166319;166320;166321;166322;166323;166324;166325;166326;166327 166317 16 IPAFLNVVDIAGLVK Unmodified 1567.9338 0.93376492 4636 Q9NTK5 OLA1 Obg-like ATPase 1 yes yes 0 0 0 By MS/MS 2 0 1 1 102.39 97.673 2 6.3063E-38 120653 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.7 110.76 18472000 0 18472000 0 0 0 0 0 0 0 0 0 0 0 0 0 24731 4636 22561 208265 166328 166328 1 IPAILYLCYTDVMK Unmodified 1698.8725 0.87248657 663 O95456 PSMG1 Proteasome assembly chaperone 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.812 63.904 2 0.0072936 72987 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 54.608 29.171 94432000 0 0 0 7066800 7318800 7676400 8256000 8006600 5674600 7704800 9898200 12073000 8687000 6087000 5983100 24732 663 22562 208266;208267;208268;208269;208270;208271;208272;208273;208274;208275;208276;208277 166329;166330;166331;166332;166333;166334;166335;166336 166334 8 IPALDLLIK Unmodified 994.64267 0.64266828 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 90.624 89.37 2 0.0052193 103203 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 79.906 35.512 838110000 343430000 260810000 32941000 3461200 7962700 17246000 5914500 11141000 10415000 20744000 16317000 19211000 11980000 26410000 50126000 24733 1986 22563 208278;208279;208280;208281;208282;208283;208284;208285;208286;208287;208288;208289;208290;208291;208292;208293;208294 166337;166338;166339;166340;166341;166342;166343;166344;166345;166346;166347;166348;166349;166350;166351;166352;166353;166354 166339 18 IPAMTIAK Oxidation (M) 859.48372 0.48372479 930 P10809 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.3 2.1 1 9 1 1 1 1 1 1 1 1 1 1 25.253 24.953 2 0.0074326 26149 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 77.282 7.8503 1530200000 0 116040000 0 0 110810000 175810000 166340000 172750000 110210000 183510000 157380000 0 243590000 93764000 0 24734 930 22564 208295;208296;208297;208298;208299;208300;208301;208302;208303;208304 166355;166356;166357;166358;166359;166360 166360 1203 4 IPAMTIAK Unmodified 843.48881 0.48881017 930 P10809 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.89 2.72 3 1 24 1 2 1 2 2 2 2 2 2 2 2 2 2 2 2 49.2 48.526 1;2 0.0090865 53592 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 126.28 11.738 6640300000 1375400000 1220300000 99986000 218980000 231740000 278620000 251730000 359390000 204160000 388570000 413310000 367980000 355570000 287620000 586940000 24735 930 22564 208305;208306;208307;208308;208309;208310;208311;208312;208313;208314;208315;208316;208317;208318;208319;208320;208321;208322;208323;208324;208325;208326;208327;208328;208329;208330;208331;208332 166361;166362;166363;166364;166365;166366;166367;166368;166369;166370;166371 166364 9 IPASWTNPSGK Unmodified 1156.5877 0.58767259 1243 P29144 TPP2 Tripeptidyl-peptidase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 6.12 3.89 3 1 4 1 2 1 1 1 1 1 48.452 45.88 2 0.0016445 58898 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.642 71.421 315230000 134250000 127910000 8253700 0 0 0 6524400 0 0 0 12168000 8670000 0 0 17462000 24736 1243 22565 208333;208334;208335;208336;208337;208338;208339;208340 166372;166373;166374;166375;166376;166377 166372 4 IPAYFVTVSDPAVPPGEDPDGR Unmodified 2298.1168 0.11682726 1210 P26640 VARS Valine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 2 1 2 84.504 84.596 2;3 8.278E-10 97894 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 92.457 87.178 51597000 0 0 0 0 7424900 10720000 0 0 0 0 9241400 0 2713800 0 21497000 24737 1210 22566 208341;208342;208343;208344;208345;208346;208347 166378;166379;166380;166381;166382 166380 5 IPCDSPQSDPVDTPTSTK Unmodified 1943.8782 0.87823647 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 2 1 1 42.795 42.747 2 1.8525E-32 47938 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 118.37 104.94 21754000 0 0 0 4187500 4193900 0 4138400 3599300 0 3503900 0 0 2131400 0 0 24738 1492 22567 208348;208349;208350;208351;208352;208353;208354;208355 166383;166384;166385;166386;166387;166388 166386 6 IPCESPPLEVVDTTASTK Unmodified 1942.9558 0.95575851 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 0 By MS/MS 2 0 1 1 78.44 73.705 2 1.6517E-07 91828 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.822 58.142 21064000 0 21064000 0 0 0 0 0 0 0 0 0 0 0 0 0 24739 1492 22568 208356 166389 166389 1 IPCLLAPSVFK Unmodified 1243.6999 0.69986558 3377 Q8N9N5 BANP Protein BANP yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 86.356 86.457 2 0.019772 99943 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.751 36.655 5396500 0 0 0 0 0 1826100 0 0 0 0 0 0 0 0 3570300 24740 3377 22569 208357;208358 166390 166390 1 IPDEELR Unmodified 870.4447 0.44469675 4074;4075 Q99961;Q99962 SH3GL1;SH3GL2 Endophilin-A2;Endophilin-A1 no no 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 31.659 31.889 2 0.018548 34635 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 111.73 21.021 255280000 0 0 0 24212000 2302800 0 0 2257100 0 2474500 43589000 57417000 33126000 26119000 63780000 24741 4074;4075 22570 208359;208360;208361;208362;208363;208364;208365;208366;208367 166391;166392;166393;166394;166395 166392 5 IPDEELRQALEK Unmodified 1439.762 0.76200815 4074;4075 Q99961;Q99962 SH3GL1;SH3GL2 Endophilin-A2;Endophilin-A1 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.53 3 2 11 1 3 1 1 1 1 1 1 1 1 1 1 1 1 61.442 59.781 2;3 1.0092E-09 74672 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 104.87 69.129 1070500000 750970 540600000 237510000 16968000 15601000 30844000 24064000 31365000 20784000 35391000 39913000 43357000 33324000 0 0 24742 4074;4075 22571 208368;208369;208370;208371;208372;208373;208374;208375;208376;208377;208378;208379;208380;208381;208382;208383 166396;166397;166398;166399;166400;166401;166402;166403;166404;166405;166406;166407;166408;166409 166406 13 IPDEIIDMVK Oxidation (M) 1187.6108 0.6107758 5214 Q9Y4Z0 LSM4 U6 snRNA-associated Sm-like protein LSm4 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 67.094 67.248 2 0.012928 76982 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 47.706 16.176 22372000 0 0 0 2097700 0 0 0 1636200 0 0 4398800 5213700 2865000 2108200 4052800 24743 5214 22572 208384;208385;208386;208387;208388;208389;208390 166410;166411 166410 6614 2 IPDEINDR Unmodified 970.47197 0.47197413 4165 Q9BUL8 PDCD10 Programmed cell death protein 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.551 30.74 2 0.0081342 33032 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 87.251 60.289 228900000 0 0 0 10187000 10778000 24271000 14496000 14166000 8256100 23091000 23310000 21067000 15263000 20056000 43955000 24744 4165 22573 208391;208392;208393;208394;208395;208396;208397;208398;208399;208400;208401;208402 166412;166413;166414;166415;166416;166417;166418 166415 6 IPDEINDRVR Unmodified 1225.6415 0.64149908 4165 Q9BUL8 PDCD10 Programmed cell death protein 10 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.875 37.056 3 0.0051433 40854 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 61.161 45.297 670540000 0 0 0 33655000 28304000 75873000 37784000 36213000 40536000 82742000 58693000 69325000 64914000 45378000 97122000 24745 4165 22574 208403;208404;208405;208406;208407;208408;208409;208410;208411;208412;208413;208414 166419;166420;166421;166422;166423;166424;166425;166426 166420 6 IPDIYDCIK Unmodified 1135.5583 0.5583463 317 O43314 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 yes yes 0 0 0 By MS/MS 10 0 1 1 43.258 43.306 2 0.02017 48491 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 53.351 19.836 34218000 0 0 0 0 0 34218000 0 0 0 0 0 0 0 0 0 24746 317 22575 208415 166427 166427 1 IPDPEAVKPDDWDEDAPAK Unmodified 2106.9746 0.9745797 1227 P27824 CANX Calnexin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.76 2.85 3 1 21 1 2 1 1 2 2 2 2 2 1 2 1 2 2 2 68.496 67.708 2;3 6.2924E-50 77700 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 138.46 134.68 1196400000 17482000 71862000 3140900 78470000 66011000 87120000 53755000 84734000 69112000 93023000 116420000 133690000 91174000 90833000 139580000 24747 1227 22576 208416;208417;208418;208419;208420;208421;208422;208423;208424;208425;208426;208427;208428;208429;208430;208431;208432;208433;208434;208435;208436;208437;208438;208439;208440 166428;166429;166430;166431;166432;166433;166434;166435;166436;166437;166438;166439;166440;166441;166442;166443;166444;166445;166446;166447;166448;166449;166450;166451;166452;166453;166454;166455;166456;166457;166458;166459 166431 31 IPDPSTWNLNPDASYVYYCANETVHGVEFDFIPDVK Unmodified 4171.915 0.91496291 5261 Q9Y617 PSAT1 Phosphoserine aminotransferase yes yes 0 0 0 By MS/MS 2 0 1 1 99.55 91.42 3 1.8267E-35 117822 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.163 70.828 18667000 18667000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24748 5261 22577 208441 166460;166461 166461 2 IPDQLVILDMK Unmodified 1283.7159 0.71590958 1595 P49755 TMED10 Transmembrane emp24 domain-containing protein 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 86.198 86.266 2 0.00031891 100025 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 115.18 105.96 89076000 0 0 0 2844600 3618200 5571700 4278300 8640500 4618700 9666800 8198400 8740700 5654000 7450400 19794000 24749 1595 22578 208442;208443;208444;208445;208446;208447;208448;208449;208450;208451;208452;208453 166462;166463;166464;166465;166466;166467;166468;166469;166470;166471;166472;166473 166466 11 IPDQLVILDMK Oxidation (M) 1299.7108 0.7108242 1595 P49755 TMED10 Transmembrane emp24 domain-containing protein 10 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 2 1 2 2 2 1 1 2 1 2 2 2 78.889 78.954 2 0.00020188 90920 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 89.805 75.131 304370000 0 0 0 24092000 12414000 12263000 28041000 25630000 11851000 19729000 40386000 28005000 35691000 25017000 41255000 24750 1595 22578 208454;208455;208456;208457;208458;208459;208460;208461;208462;208463;208464;208465;208466;208467;208468;208469;208470;208471;208472;208473 166474;166475;166476;166477;166478;166479;166480;166481;166482;166483;166484;166485;166486;166487;166488;166489;166490;166491 166477 2563 12 IPDSHEITLK Unmodified 1151.6186 0.61863837 4693 Q9NW82 WDR70 WD repeat-containing protein 70 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.96 2.69 3 20 1 2 2 2 2 1 2 2 1 2 2 2 1 1 43.11 42.66 2;3 0.0031453 47224 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 70.942 51.699 690860000 0 120560000 204280000 18250000 21303000 21945000 21935000 20185000 21241000 32648000 58084000 30584000 34216000 26076000 59554000 24751 4693 22579 208474;208475;208476;208477;208478;208479;208480;208481;208482;208483;208484;208485;208486;208487;208488;208489;208490;208491;208492;208493;208494;208495;208496 166492;166493;166494;166495;166496;166497;166498;166499;166500;166501;166502;166503;166504 166504 7 IPDSIAVIQQLSPK Unmodified 1507.861 0.86099391 2745 Q5K651 SAMD9 Sterile alpha motif domain-containing protein 9 yes yes 0 0 0 By MS/MS 10 0 1 1 86.025 86.193 2 0.027361 99639 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.879 35.356 3126800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3126800 24752 2745 22580 208497 166505 166505 0 IPDTVLEK Unmodified 913.51205 0.51204804 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43.28 42.76 2 0.017458 52646 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 90.37 20.986 1342300000 0 1067000000 16421000 16588000 12507000 27971000 11663000 14501000 14010000 19329000 27491000 22905000 22444000 27572000 41833000 24753 1986 22581 208498;208499;208500;208501;208502;208503;208504;208505;208506;208507;208508;208509;208510;208511 166506;166507;166508;166509;166510 166508 5 IPDVAPIVSDQK Unmodified 1280.6976 0.69761697 1279 P30414 NKTR NK-tumor recognition protein;Putative peptidyl-prolyl cis-trans isomerase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.732 65.818 2 0.0010824 74478 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 70.808 49.938 43713000 0 0 0 1792300 2147200 4046800 2663000 1859200 3349300 4051000 5067500 4242900 4046700 5407600 5039300 24754 1279 22582 208512;208513;208514;208515;208516;208517;208518;208519;208520;208521;208522;208523 166511;166512;166513;166514;166515;166516;166517;166518;166519 166517 9 IPDVAPIVSDQKPSVSK Unmodified 1778.9778 0.97781458 1279 P30414 NKTR NK-tumor recognition protein;Putative peptidyl-prolyl cis-trans isomerase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 64.217 64.203 3 0.012433 73289 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 30.974 17.855 11383000 0 0 0 0 2969700 0 3990300 0 0 0 4422900 0 0 0 0 24755 1279 22583 208524;208525;208526 166520 166520 1 IPDWFLNR Unmodified 1059.5502 0.55016488 1885 P62269 RPS18 40S ribosomal protein S18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 82.386 82.435 2 0.0055471 95958 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 106.43 72.242 431140000 0 0 0 15163000 19520000 42848000 18771000 30520000 43976000 44118000 33070000 57352000 58787000 67012000 0 24756 1885 22584 208527;208528;208529;208530;208531;208532;208533;208534;208535;208536;208537 166521;166522;166523;166524;166525;166526;166527 166524 1 IPEAPAGPPSDFGLFLSDDDPKK Unmodified 2412.1849 0.18490682 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 86.796 86.931 3 3.6118E-17 100814 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 83.395 79.868 68759000 0 0 0 0 0 9533700 0 0 4918400 10531000 7741600 9307300 0 3607500 23120000 24757 5187 22585 208538;208539;208540;208541;208542;208543;208544 166528;166529;166530;166531;166532;166533;166534;166535;166536 166530 9 IPEDILK Unmodified 826.48002 0.48001963 4719 Q9NX62 IMPAD1 Inositol monophosphatase 3 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 57.717 52.375 2 0.031783 67547 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.029 18.645 94799000 0 94799000 0 0 0 0 0 0 0 0 0 0 0 0 0 24758 4719 22586 208545;208546 166537 166537 1 IPEEHDLESQIRK Unmodified 1592.8158 0.81583463 3304 Q8N122 RPTOR Regulatory-associated protein of mTOR yes yes 0 0 1 By MS/MS By MS/MS 2 0 4 2 2 48.969 44.175 3;4 0.0015433 55561 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 85.536 73.559 62171000 0 28989000 33181000 0 0 0 0 0 0 0 0 0 0 0 0 24759 3304 22587 208547;208548;208549;208550 166538;166539 166539 0 IPEFDPGATK Unmodified 1073.5393 0.53932542 4820 Q9P2K3 RCOR3 REST corepressor 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 52.746 52.841 2 0.0026457 59923 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 81.525 60.237 256100000 0 0 0 14874000 15760000 20179000 18443000 18072000 18523000 20110000 24737000 56387000 28265000 20748000 0 24760 4820 22588 208551;208552;208553;208554;208555;208556;208557;208558;208559;208560;208561 166540;166541;166542;166543;166544;166545;166546;166547 166543 7 IPEFEVENSPLSDVAK Unmodified 1772.8832 0.88324549 3098 Q7Z4H7 HAUS6 HAUS augmin-like complex subunit 6 yes yes 0 0 0 By MS/MS 2 0 1 1 87.068 82.26 2 0.025376 102280 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 49.356 26.344 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24761 3098 22589 208562 166548 166548 1 IPEFIAFR Unmodified 991.5491 0.54910224 2465 Q14CX7 NAA25 N-alpha-acetyltransferase 25, NatB auxiliary subunit yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 82.659 82.72 2 0.0043449 95512 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 111.04 94.882 1247900000 0 0 0 707590 836070 4457800 311160000 472050000 384270000 16350000 16445000 29908000 0 2807100 8932000 24762 2465 22590 208563;208564;208565;208566;208567;208568;208569;208570;208571;208572;208573 166549;166550;166551;166552;166553;166554;166555;166556;166557 166556 9 IPEGIQVDSDGLITITTPNK Unmodified 2110.1158 0.11576462 3076 Q7Z2Z2 EFTUD1 Elongation factor Tu GTP-binding domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 4 2 4 2 88.716 85.203 2;3 4.0912E-119 105774 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 213.51 192.92 49223000 0 46494000 2729100 0 0 0 0 0 0 0 0 0 0 0 0 24763 3076 22591 208574;208575;208576;208577;208578;208579 166558;166559;166560;166561;166562 166558 5 IPEGLFDPSNVK Unmodified 1314.682 0.68196691 716 O96019;O94805 ACTL6A;ACTL6B Actin-like protein 6A;Actin-like protein 6B yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 76.691 75.56 2 2.5833E-22 93484 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 163.66 128.22 2446700000 56614000 1193300000 61424000 56586000 71209000 80738000 85543000 85583000 57264000 109410000 112930000 119390000 77034000 91937000 187760000 24764 716 22592 208580;208581;208582;208583;208584;208585;208586;208587;208588;208589;208590;208591;208592;208593;208594;208595 166563;166564;166565;166566;166567;166568;166569;166570;166571;166572;166573;166574;166575;166576;166577;166578;166579;166580 166566 17 IPEGTILTMDMLTVK 2 Oxidation (M) 1692.8678 0.86779512 4591 Q9NR45 NANS Sialic acid synthase yes yes 0 2 0 By MS/MS By MS/MS 2.2 0.4 4 1 3 2 80.511 76.933 2;3 1.7057E-23 95054 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.34 90.01 92827000 0 67582000 25244000 0 0 0 0 0 0 0 0 0 0 0 0 24765 4591 22593 208596;208597;208598;208599;208600 166581;166582;166583;166584;166585 166582 5991;5992 4 IPEGTILTMDMLTVK Oxidation (M) 1676.8729 0.8728805 4591 Q9NR45 NANS Sialic acid synthase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 1 3 2 89.489 85.153 2 1.2881E-72 106358 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 198.55 161.87 254710000 6610300 229140000 18954000 0 0 0 0 0 0 0 0 0 0 0 0 24766 4591 22593 208601;208602;208603;208604;208605;208606 166586;166587;166588;166589;166590 166586 5991;5992 5 IPEGTILTMDMLTVK Unmodified 1660.878 0.87796588 4591 Q9NR45 NANS Sialic acid synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 96.339 91.676 2 1.7346E-65 114671 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 188.91 165.99 116070000 27534000 81697000 6838900 0 0 0 0 0 0 0 0 0 0 0 0 24767 4591 22593 208607;208608;208609;208610 166591;166592;166593;166594 166591 4 IPEIHFPLESK Unmodified 1308.7078 0.70778773 14 A2RUS2 DENND3 DENN domain-containing protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 84.927 79.805 3 0.0016663 100693 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.435 60.48 43881000 26026000 15367000 2487800 0 0 0 0 0 0 0 0 0 0 0 0 24768 14 22594 208611;208612;208613 166595;166596;166597 166595 3 IPEINSSDMSAHVTSPSGR Unmodified 1983.932 0.93200337 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.878 58.989 3 2.5869E-12 67947 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 89.846 67.043 202840000 0 0 0 6451800 4046100 17358000 8366100 10783000 6067700 16578000 28613000 18235000 10270000 18318000 57748000 24769 487 22595 208614;208615;208616;208617;208618;208619;208620;208621;208622;208623;208624;208625 166598;166599;166600;166601;166602;166603;166604;166605;166606;166607;166608;166609;166610 166609 13 IPEINSSDMSAHVTSPSGR Oxidation (M) 1999.9269 0.926918 487 O75369 FLNB Filamin-B yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 43.961 44.559 3 0.00038959 49736 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 44.587 34.53 33277000 0 0 0 0 0 0 0 0 0 0 13292000 0 0 0 19986000 24770 487 22595 208626;208627 166611;166612 166612 619 2 IPEINSSDMSAHVTSPSGRVTEAEIVPMGK Oxidation (M) 3154.5275 0.52746346 487 O75369 FLNB Filamin-B yes yes 0 1 1 By matching By MS/MS 2 0 3 1 2 76.852 73.403 4 1.4033E-11 88641 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 58.08 53.027 37690000 0 18080000 19610000 0 0 0 0 0 0 0 0 0 0 0 0 24771 487 22596 208628;208629;208630 166613;166614 166613 619;620 2 IPEIQATMRELSK Oxidation (M) 1530.8076 0.80757813 5166 Q9Y3E7 CHMP3 Charged multivesicular body protein 3 yes yes 0 1 1 By MS/MS 2 0 1 1 60.504 52.263 3 0.021054 70870 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 41.092 28.324 9564000 9564000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24772 5166 22597 208631 166615 166615 1 IPEIQATMRELSK Unmodified 1514.8127 0.81266351 5166 Q9Y3E7 CHMP3 Charged multivesicular body protein 3 yes yes 0 0 1 By MS/MS 2 0 1 1 80.157 72.026 3 2.8919E-10 94453 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 116.51 88.544 65195000 65195000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24773 5166 22597 208632 166616;166617 166616 2 IPEISIQDMTAQVTSPSGK Oxidation (M) 2017.0038 0.003771334 1124 P21333 FLNA Filamin-A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.01 3 3 24 6 2 2 2 2 2 2 2 2 2 2 2 2 73.339 72.552 2;3 3.5605E-121 89248 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 209.66 204.17 1166300000 0 911010000 0 11059000 14477000 23237000 16616000 9527300 13481000 30637000 29737000 35220000 16220000 18133000 36987000 24774 1124 22598 208633;208634;208635;208636;208637;208638;208639;208640;208641;208642;208643;208644;208645;208646;208647;208648;208649;208650;208651;208652;208653;208654;208655;208656;208657;208658;208659;208660;208661;208662 166618;166619;166620;166621;166622;166623;166624;166625;166626;166627;166628;166629;166630;166631;166632;166633;166634;166635;166636;166637 166620 1614 18 IPEISIQDMTAQVTSPSGK Unmodified 2001.0089 0.0088567119 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.2 3.27 5 2 23 1 4 2 1 2 2 2 2 2 2 2 2 2 2 2 85.858 84.933 2;3 0 105011 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 340.73 317.5 3569100000 16269000 3137500000 13330000 0 17696000 28227000 14640000 33403000 17183000 43839000 42472000 48517000 14972000 27612000 113490000 24775 1124 22598 208663;208664;208665;208666;208667;208668;208669;208670;208671;208672;208673;208674;208675;208676;208677;208678;208679;208680;208681;208682;208683;208684;208685;208686;208687;208688;208689;208690;208691;208692 166638;166639;166640;166641;166642;166643;166644;166645;166646;166647;166648;166649;166650;166651;166652;166653;166654;166655;166656;166657;166658;166659;166660;166661;166662;166663;166664;166665;166666;166667 166646 26 IPELLASGMVDNMTK 2 Oxidation (M) 1649.8004 0.80044384 1289 P30740 SERPINB1 Leukocyte elastase inhibitor yes yes 0 2 0 By MS/MS By MS/MS By MS/MS 2.29 0.452 5 2 1 5 1 72.814 68.285 2;3 7.5306E-07 86314 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.66 91.502 347430000 0 316990000 30440000 0 0 0 0 0 0 0 0 0 0 0 0 24776 1289 22599 208693;208694;208695;208696;208697;208698;208699 166668;166669;166670;166671;166672;166673;166674;166675 166668 1899;1900 7 IPELLASGMVDNMTK Oxidation (M) 1633.8055 0.80552922 1289 P30740 SERPINB1 Leukocyte elastase inhibitor yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 4 3.46 6 2 1 3 2 1 1 80.688 77.309 2;3 2.2485E-23 96867 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.89 113.31 814520000 12866000 742670000 40023000 0 0 0 0 0 0 0 0 0 0 4116100 14848000 24777 1289 22599 208700;208701;208702;208703;208704;208705;208706;208707 166676;166677;166678;166679;166680;166681;166682 166678 1899;1900 6 IPELLASGMVDNMTK Unmodified 1617.8106 0.8106146 1289 P30740 SERPINB1 Leukocyte elastase inhibitor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 2 3 2 88.868 83.998 2;3 1.8455E-22 106444 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 120.53 102 1378100000 37059000 1300800000 40268000 0 0 0 0 0 0 0 0 0 0 0 0 24778 1289 22599 208708;208709;208710;208711;208712;208713;208714 166683;166684;166685;166686;166687;166688;166689 166686 7 IPENEVPAPVKPVTDSTSAPAPK Unmodified 2343.2322 0.23219137 2581 Q15811 ITSN1 Intersectin-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 61.612 60.941 3 7.2868E-19 74027 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 99.078 91.545 + 186270000 0 84310000 0 6203600 5069100 7239700 7979400 6347400 4717800 11561000 11014000 11022000 7993600 8239700 14576000 24779 2581 22600 208715;208716;208717;208718;208719;208720;208721;208722;208723;208724;208725;208726;208727;208728 166690;166691;166692;166693;166694;166695;166696;166697 166695 8 IPEPQKPQLKPPEDIVR Unmodified 1983.1153 0.11531111 2136 Q07157 TJP1 Tight junction protein ZO-1 yes yes 0 0 2 By MS/MS By matching By MS/MS 10 0 3 1 1 1 63.103 63.198 4 0.038205 72309 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 27.496 17.966 25725000 0 0 0 0 0 9005100 0 0 0 12832000 0 0 3887700 0 0 24780 2136 22601 208729;208730;208731 166698 166698 1 IPEQILGK Unmodified 896.53312 0.53311783 2079 Q02750 MAP2K1 Dual specificity mitogen-activated protein kinase kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.306 48.468 2 0.025292 54516 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 58.815 34.612 143600000 0 0 0 9785100 6142800 19148000 10671000 7942800 5823600 14973000 12574000 14143000 10831000 10908000 20654000 24781 2079 22602 208732;208733;208734;208735;208736;208737;208738;208739;208740;208741;208742;208743 166699;166700 166700 2 IPEQTYITLK Unmodified 1204.6703 0.67033959 2759 Q5SW79 CEP170 Centrosomal protein of 170 kDa yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.781 65.867 2 0.003113 75541 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 77.677 49.935 42384000 0 0 0 4897500 2270100 3569000 2474000 3050400 1875600 3379100 4414000 5937900 3286700 2877700 4351800 24782 2759 22603 208744;208745;208746;208747;208748;208749;208750;208751;208752;208753;208754;208755 166701;166702;166703;166704;166705;166706;166707;166708;166709 166701 9 IPETYPFNPPK Unmodified 1301.6656 0.66558856 1832 P61086 UBE2K Ubiquitin-conjugating enzyme E2 K yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 69.282 68.024 2 2.5346E-24 86075 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 223.08 184.08 1486300000 30084000 1115900000 22634000 11605000 11130000 37474000 24119000 18600000 13637000 36813000 34291000 24120000 22381000 27294000 56179000 24783 1832 22604 208756;208757;208758;208759;208760;208761;208762;208763;208764;208765;208766;208767;208768;208769;208770;208771 166710;166711;166712;166713;166714;166715;166716;166717;166718;166719;166720;166721;166722;166723;166724;166725;166726;166727;166728;166729;166730;166731;166732;166733;166734 166716 24 IPEVPLHDTPER Unmodified 1401.7252 0.72522871 3743 Q96AY2 EME1 Crossover junction endonuclease EME1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 52.638 52.777 3 0.003414 59743 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 54.524 41.898 97795000 0 0 0 6267900 8701000 9778000 8215300 0 0 8435400 10146000 15043000 10707000 7685600 12815000 24784 3743 22605 208772;208773;208774;208775;208776;208777;208778;208779;208780;208781 166735;166736;166737;166738;166739 166738 4 IPFGIFSR Unmodified 935.52289 0.52288749 5065 Q9UQ13 SHOC2 Leucine-rich repeat protein SHOC-2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 81.936 81.998 2 0.049549 94459 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.082 26.527 19681000 0 0 0 958960 0 5572300 1530600 1763100 0 0 0 2577500 0 1440100 5838600 24785 5065 22606 208782;208783;208784;208785;208786;208787;208788 166740 166740 1 IPFYGSYTEMDPVIIASEGVEK Oxidation (M) 2460.177 0.17704425 1826 P61011 SRP54 Signal recognition particle 54 kDa protein yes yes 0 1 0 By MS/MS By matching 10 0 2 1 1 87.851 87.981 2 5.2267E-08 102077 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 59.185 47.745 5334900 0 0 0 0 0 0 0 0 0 3176300 0 0 0 0 2158600 24786 1826 22607 208789;208790 166741;166742 166742 2959 2 IPFYLQPHASSGAK Unmodified 1514.7882 0.78816332 3470 Q8TAF3 WDR48 WD repeat-containing protein 48 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.13 60.237 3 0.00092176 68992 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 58.32 46.527 120560000 0 0 0 6193900 5934900 8521700 7734000 7697300 5791700 9795800 12340000 15846000 10738000 10949000 19015000 24787 3470 22608 208791;208792;208793;208794;208795;208796;208797;208798;208799;208800;208801;208802 166743;166744;166745;166746;166747;166748;166749;166750 166749 8 IPGESTQK Unmodified 858.4447 0.44469675 4573 Q9NQR4 NIT2 Omega-amidase NIT2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 10.562 7.4345 2 0.046528 10094 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.3 30.275 588220000 37080000 547710000 3435000 0 0 0 0 0 0 0 0 0 0 0 0 24788 4573 22609 208803;208804;208805 166751 166751 0 IPGFTDLPK Unmodified 986.54368 0.54368251 3627 Q92570 NR4A3 Nuclear receptor subfamily 4 group A member 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.151 72.222 2 0.013016 82311 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.436 26.64 165640000 0 0 0 7433700 7684500 16551000 9779600 20150000 9271900 16277000 14602000 9549100 12654000 14389000 27298000 24789 3627 22610 208806;208807;208808;208809;208810;208811;208812;208813;208814;208815;208816;208817 166752;166753;166754;166755;166756;166757;166758;166759 166753 8 IPGGATLVFEVELLK Unmodified 1584.9127 0.91269513 1212 P26885 FKBP2 Peptidyl-prolyl cis-trans isomerase FKBP2 yes yes 0 0 0 By MS/MS 2 0 1 1 99.621 91.49 2 0.00012157 117915 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.85 83.382 7345200 7345200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24790 1212 22611 208818 166760 166760 1 IPGGIIEDSCVLR Unmodified 1427.7442 0.74424959 1570 P49368 CCT3 T-complex protein 1 subunit gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 76.48 76.331 2 4.133E-13 87497 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 136.96 95.675 1966200000 0 0 3774500 62464000 101490000 139240000 84256000 113500000 116060000 157860000 224170000 288490000 153790000 222230000 298880000 24791 1570 22612 208819;208820;208821;208822;208823;208824;208825;208826;208827;208828;208829;208830;208831 166761;166762;166763;166764;166765;166766;166767;166768;166769;166770;166771;166772;166773;166774;166775 166764 15 IPGGLSEAK Unmodified 870.48108 0.48108226 742 P01040 CSTA Cystatin-A;Cystatin-A, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 2 1 1 1 1 1 1 1 1 1 1 1 29.687 29.84 2 0.0036824 32172 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 95.741 35.06 2869600000 0 0 0 867730000 169200000 124670000 155570000 229880000 98969000 156270000 200400000 307400000 184300000 157050000 218170000 24792 742 22613 208832;208833;208834;208835;208836;208837;208838;208839;208840;208841;208842;208843;208844 166776;166777;166778;166779;166780;166781;166782;166783;166784;166785;166786;166787;166788 166782 11 IPGGLSEAKPATPEIQEIVDK Unmodified 2191.1736 0.17361385 742 P01040 CSTA Cystatin-A;Cystatin-A, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 76.913 76.957 3 0.00022635 88920 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 45.784 36.601 47815000 0 0 0 6149300 2983100 0 3048300 5521600 1652700 5955000 3055700 13362000 3021500 3065300 0 24793 742 22614 208845;208846;208847;208848;208849;208850;208851;208852;208853;208854 166789;166790;166791;166792;166793;166794 166793 6 IPGIIIAASAVR Unmodified 1179.7339 0.7339429 1333 P33992 MCM5 DNA replication licensing factor MCM5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 82.105 82.209 2 0.0028161 94931 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 66.056 60.709 59564000 0 0 0 0 1419800 4359000 2641900 2116200 3040700 5433000 6138600 7206400 1552400 6094900 19561000 24794 1333 22615 208855;208856;208857;208858;208859;208860;208861;208862;208863;208864;208865 166795;166796;166797;166798;166799;166800;166801;166802;166803;166804;166805 166797 11 IPGLLGVFQK Unmodified 1070.6488 0.64881629 1754 P55060 CSE1L Exportin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 86.363 86.432 2 0.0063413 99950 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 65.313 65.313 169310000 0 0 0 4060200 3634700 40687000 6817700 7988000 6870100 14860000 7792900 12098000 7439800 10472000 46586000 24795 1754 22616 208866;208867;208868;208869;208870;208871;208872;208873;208874;208875;208876;208877;208878 166806;166807;166808;166809;166810;166811;166812;166813;166814;166815;166816;166817;166818;166819 166809 14 IPGLVTLK Unmodified 839.54804 0.54803961 4955 Q9UK61 FAM208A Protein FAM208A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 68.212 68.297 2 0.033014 78330 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 53.968 18.35 37329000 0 0 0 1566400 2228600 0 2316400 1974700 0 4085400 4113300 6767300 4572100 4050400 5653900 24796 4955 22617 208879;208880;208881;208882;208883;208884;208885;208886;208887;208888 166820 166820 1 IPGMLIIDTPGHESFSNLR Oxidation (M) 2112.0674 0.067374644 437 O60841 EIF5B Eukaryotic translation initiation factor 5B yes yes 0 1 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 79.97 80.166 3 3.7647E-05 92349 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.49 48.702 10308000 0 0 0 0 0 0 0 0 0 0 0 2839500 0 0 7468100 24797 437 22618 208889;208890;208891 166821;166822 166822 560 2 IPGRVSTEVDAR Unmodified 1298.6943 0.69426293 1392 P37837 TALDO1 Transaldolase yes yes 0 0 1 By MS/MS 2 0 1 1 37.858 31.361 3 0.031784 43640 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 31.215 5.0973 35076000 35076000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24798 1392 22619 208892 166823 166823 1 IPGSPPESMGR Oxidation (M) 1142.539 0.53900784 1620 P50395 GDI2 Rab GDP dissociation inhibitor beta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 23.13 23.326 2 0.0011503 23365 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.908 56.146 132740000 0 0 0 11787000 3943200 5096300 5812800 5583800 3256400 0 20213000 19951000 0 14960000 42142000 24799 1620 22620 208893;208894;208895;208896;208897;208898;208899;208900;208901;208902 166824;166825;166826;166827;166828 166824 2599 4 IPGSPPESMGR Unmodified 1126.5441 0.54409322 1620 P50395 GDI2 Rab GDP dissociation inhibitor beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 36.446 36.656 2 0.00049349 40250 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 83.456 32.397 224080000 0 0 0 15262000 5220700 0 0 8247600 5931900 9191300 30116000 26462000 8627200 27727000 87295000 24800 1620 22620 208903;208904;208905;208906;208907;208908;208909;208910;208911;208912 166829;166830;166831;166832;166833 166833 5 IPGTDAQAQAEDMNVK Unmodified 1686.7883 0.78829925 2958 Q6PJG2 ELMSAN1 ELM2 and SANT domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.318 47.483 2 3.9009E-31 52562 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 145.6 125.39 67220000 0 0 0 4419200 4151400 6045200 4435900 5092700 4580300 7345000 7786000 5873700 4545000 4623800 8321600 24801 2958 22621 208913;208914;208915;208916;208917;208918;208919;208920;208921;208922;208923;208924 166834;166835;166836;166837;166838;166839;166840;166841;166842;166843;166844;166845 166838 12 IPGTPGAGGR Unmodified 881.47191 0.47191456 2605 Q16514 TAF12 Transcription initiation factor TFIID subunit 12 yes yes 0 0 0 By MS/MS 10 0 1 1 19.218 19.837 2 0.0043379 19289 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.208 39.355 5208500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5208500 24802 2605 22622 208925 166846 166846 1 IPHEPVINSSNVHVGSR Unmodified 1840.9544 0.9543938 2456 Q14966 ZNF638 Zinc finger protein 638 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 1 2 2 2 2 2 1 2 2 2 2 46.879 47.1 3;4 0.0012301 52340 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.288 34.303 335680000 0 0 0 9977600 8937600 27157000 18715000 18877000 14003000 36671000 22989000 44607000 48492000 32036000 53224000 24803 2456 22623 208926;208927;208928;208929;208930;208931;208932;208933;208934;208935;208936;208937;208938;208939;208940;208941;208942;208943;208944;208945;208946 166847;166848;166849;166850;166851;166852;166853;166854;166855;166856 166856 9 IPIANTEK Unmodified 884.49673 0.49673232 416 O60583 CCNT2 Cyclin-T2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 28.038 23.743 2 0.011822 31287 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.09 45.109 75959000 0 75959000 0 0 0 0 0 0 0 0 0 0 0 0 0 24804 416 22624 208947;208948 166857 166857 1 IPILLIQQPGK Unmodified 1218.77 0.76999406 4026 Q99575 POP1 Ribonucleases P/MRP protein subunit POP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 83.284 82.633 2 6.9746E-05 95419 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 133.55 105.15 290960000 0 10275000 2866500 12946000 14692000 20753000 16282000 18432000 17290000 26993000 28067000 31798000 21310000 20439000 48822000 24805 4026 22625 208949;208950;208951;208952;208953;208954;208955;208956;208957;208958;208959;208960;208961;208962;208963 166858;166859;166860;166861;166862;166863;166864;166865;166866;166867;166868;166869;166870;166871 166859 14 IPILYGEVEK Unmodified 1159.6489 0.64887587 4772 Q9NZL9 MAT2B Methionine adenosyltransferase 2 subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 71.136 71.357 2 0.0023779 82290 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 84.213 60.784 144170000 0 0 0 0 0 9922500 0 9057900 4925300 0 23129000 22843000 0 17727000 56560000 24806 4772 22626 208964;208965;208966;208967;208968;208969;208970 166872;166873;166874;166875;166876;166877;166878 166872 6 IPISAFSTSSAAEQNSNTTPR Unmodified 2178.0553 0.055289633 2986 Q6VMQ6 ATF7IP Activating transcription factor 7-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 22 2 2 2 2 1 2 2 2 2 2 2 1 65.801 65.861 2;3 3.2202E-09 75502 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 95.651 87.74 136400000 0 0 0 6897700 7590900 13969000 12985000 5793100 6861900 13982000 13800000 22019000 10906000 14393000 7200600 24807 2986 22627 208971;208972;208973;208974;208975;208976;208977;208978;208979;208980;208981;208982;208983;208984;208985;208986;208987;208988;208989;208990;208991;208992 166879;166880;166881;166882;166883;166884;166885;166886;166887;166888;166889;166890;166891;166892 166887 13 IPISAFSTSSAAEQNSNTTPRIENQTNK Unmodified 3005.469 0.46902061 2986 Q6VMQ6 ATF7IP Activating transcription factor 7-interacting protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 74.283 66.152 3 8.6827E-168 87427 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 186.28 183.34 39750000 39750000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24808 2986 22628 208993 166893 166893 1 IPISLVLR Unmodified 909.60114 0.60113781 684 O95747 OXSR1 Serine/threonine-protein kinase OSR1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.193 81.253 2 0.010495 93922 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 79.469 63.97 116180000 0 0 0 3231700 4329800 13074000 8267100 5196100 5960900 14412000 12436000 16554000 7798200 9171000 15745000 24809 684 22629 208994;208995;208996;208997;208998;208999;209000;209001;209002;209003;209004;209005 166894;166895;166896;166897;166898;166899;166900;166901;166902;166903 166895 10 IPLFNTDVDNLEGK Unmodified 1573.7988 0.79878758 3950 Q96PZ0 PUS7 Pseudouridylate synthase 7 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.71 5 11 1 2 2 1 1 1 1 1 1 1 1 1 1 1 83.418 82.037 2 4.6837E-52 101687 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 225.15 195.34 1043700000 58603000 834480000 13833000 4503700 6094000 15084000 8056400 10212000 8096400 18279000 17948000 20540000 8135700 19838000 0 24810 3950 22630 209006;209007;209008;209009;209010;209011;209012;209013;209014;209015;209016;209017;209018;209019;209020;209021 166904;166905;166906;166907;166908;166909;166910;166911;166912;166913;166914;166915;166916;166917;166918;166919 166907 15 IPLGLDLK Unmodified 867.54295 0.54295423 3252 Q8IX01 SUGP2 SURP and G-patch domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 76.362 75.844 2 0.015996 87645 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 67.981 31.795 128720000 0 38981000 7965500 3668500 6891300 7790600 0 5328200 6553000 8408300 8438600 6625700 9025800 8469600 10573000 24811 3252 22631 209022;209023;209024;209025;209026;209027;209028;209029;209030;209031;209032;209033;209034 166920;166921;166922;166923;166924;166925;166926;166927 166927 8 IPLIFQK Unmodified 857.53747 0.53747492 3319 Q8N392 ARHGAP18 Rho GTPase-activating protein 18 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 73.826 73.628 2 0.034267 84858 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 71.359 28.641 20534000 0 0 0 2865000 2464800 9535200 5669200 0 0 0 0 0 0 0 0 24812 3319 22632 209035;209036;209037;209038 166928 166928 1 IPLLCVPFEK Unmodified 1214.6733 0.67331648 3951 Q96Q05 TRAPPC9 Trafficking protein particle complex subunit 9 yes yes 0 0 0 By MS/MS 2 0 1 1 94.196 86.065 2 0.0049244 111379 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.308 56.234 7395900 7395900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24813 3951 22633 209039 166929 166929 1 IPLLSDLTHQISK Unmodified 1463.8348 0.83477916 2245 Q13162 PRDX4 Peroxiredoxin-4 yes yes 0 0 0 By MS/MS 10 0 1 1 83.24 83.43 3 4.1043E-05 96249 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.498 71.361 11657000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11657000 24814 2245 22634 209040 166930 166930 1 IPLLVVGNK Unmodified 951.6117 0.6117025 941 P11234 RALB Ras-related protein Ral-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.06 2.49 1 1 14 1 1 1 1 1 1 1 1 1 2 2 1 1 1 73.355 73.051 2 0.003134 84359 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 91.041 63.904 107120000 0 2306200 1843300 6087700 0 0 5701100 6930500 6612400 15062000 17338000 15253000 9246300 10027000 10714000 24815 941 22635 209041;209042;209043;209044;209045;209046;209047;209048;209049;209050;209051;209052;209053;209054;209055;209056 166931;166932;166933;166934;166935;166936;166937;166938;166939;166940;166941;166942;166943;166944;166945;166946;166947 166932 17 IPLMLNDSGSAHSMPK Oxidation (M) 1712.8226 0.82257627 2041 Q00613 HSF1 Heat shock factor protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 63.349 57.356 3 0.00015782 74455 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.451 59.817 67691000 37511000 23032000 7147700 0 0 0 0 0 0 0 0 0 0 0 0 24816 2041 22636 209057;209058;209059 166948;166949;166950 166948 3301;3302 3 IPLMLNDSGSAHSMPK Unmodified 1696.8277 0.82766164 2041 Q00613 HSF1 Heat shock factor protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 4 3.46 3 1 1 1 1 1 70.006 65.808 3 1.3005E-40 87394 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 120.32 100.64 227380000 138390000 58450000 5229900 0 0 0 0 0 0 0 0 0 0 0 25301000 24817 2041 22636 209060;209061;209062;209063 166951;166952;166953 166953 2 IPLMLNDSGSAHSMPK 2 Oxidation (M) 1728.8175 0.81749089 2041 Q00613 HSF1 Heat shock factor protein 1 yes yes 0 2 0 By MS/MS By MS/MS 2 0 2 1 1 52.315 46.303 3 0.00026999 58046 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 60.631 53.798 31194000 21136000 0 10059000 0 0 0 0 0 0 0 0 0 0 0 0 24818 2041 22636 209064;209065 166954 166954 3301;3302 0 IPLNTEQK Unmodified 941.5182 0.51819605 4200 Q9BW27 NUP85 Nuclear pore complex protein Nup85 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 23.394 23.617 2 0.008471 23741 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.095 48.449 91975000 0 0 0 5227200 5261300 0 5436100 6062400 2753200 10121000 10213000 13250000 11077000 9487200 13086000 24819 4200 22637 209066;209067;209068;209069;209070;209071;209072;209073;209074;209075;209076 166955;166956;166957;166958;166959;166960;166961;166962 166957 7 IPLPAGYREEIVR Unmodified 1511.846 0.84601255 1539 P48449 LSS Lanosterol synthase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 67.697 67.846 3 0.0025689 77736 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 51.875 33.046 131590000 0 0 0 0 9363800 11202000 8767400 12878000 8028600 13196000 12181000 17235000 14213000 9580600 14946000 24820 1539 22638 209077;209078;209079;209080;209081;209082;209083;209084;209085;209086;209087 166963;166964;166965;166966;166967;166968;166969;166970;166971;166972 166968 10 IPLPGAEMLEEEPLYVNAK Oxidation (M) 2128.0762 0.076207996 1163 P23511 NFYA Nuclear transcription factor Y subunit alpha yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 85.754 85.874 2 4.273E-06 99543 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 63.602 51.437 7257600 0 0 0 0 0 0 0 0 0 0 0 3969900 0 3287700 0 24821 1163 22639 209088;209089;209090;209091 166973;166974;166975;166976 166973 1678 4 IPLPGAEMLEEEPLYVNAK Unmodified 2112.0813 0.081293374 1163 P23511 NFYA Nuclear transcription factor Y subunit alpha yes yes 0 0 0 By MS/MS 10 0 1 1 91.873 92.011 2 0.0079171 106645 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 30.828 16.266 1169300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1169300 24822 1163 22639 209092 166977 166977 1 IPLSGPVPK Unmodified 906.55385 0.55385327 142 O00311 CDC7 Cell division cycle 7-related protein kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 48.863 49.031 2 0.016224 55181 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 56.721 28.614 114340000 0 0 0 5431200 8046400 0 7000000 0 5974700 12966000 16058000 20679000 15101000 8793100 14288000 24823 142 22640 209093;209094;209095;209096;209097;209098;209099;209100;209101;209102 166978;166979;166980;166981;166982 166978 5 IPLVPENLLK Unmodified 1134.7012 0.70124579 2871 Q6DKI1 RPL7L1 60S ribosomal protein L7-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86.385 85.406 2 0.0055193 98602 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.625 46.665 124500000 6360300 14961000 2072600 3140000 7871100 7260800 5712200 7791600 9203200 9806700 8854200 10332000 8578400 9448400 13102000 24824 2871 22641 209103;209104;209105;209106;209107;209108;209109;209110;209111;209112;209113;209114;209115;209116;209117 166983;166984;166985;166986;166987;166988;166989;166990;166991;166992;166993;166994;166995;166996 166987 14 IPMFIVHK Unmodified 983.56264 0.56264382 1533 P48147 PREP Prolyl endopeptidase yes yes 0 0 0 By MS/MS 10 0 1 1 63.988 64.552 2 0.035766 73190 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.299 21.796 4875600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4875600 24825 1533 22642 209118 166997 166997 1 IPMPDFDLHLK Unmodified 1324.6849 0.6849438 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 90.531 84.018 3 0.0064733 106407 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.172 58.172 29792000 10093000 19699000 0 0 0 0 0 0 0 0 0 0 0 0 0 24826 2172 22643 209119;209120 166998;166999 166998 2 IPMPPSSPQPR Unmodified 1205.6227 0.62267789 3542 Q8WUF5 PPP1R13L RelA-associated inhibitor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 48.993 49.144 2 0.0050367 55340 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 60.019 37.782 81507000 0 0 0 6060100 3691400 0 5235100 4117400 0 8531000 15160000 11828000 0 10744000 16140000 24827 3542 22644 209121;209122;209123;209124;209125;209126;209127;209128;209129 167000;167001;167002;167003 167000 4 IPMTPTSSFVSPPPPTASPHSNR Unmodified 2404.1845 0.18452967 3108 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 71.674 71.378 3 0.011924 82783 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 14.944 5.78 10750000 0 0 0 2687700 3234800 0 4828000 0 0 0 0 0 0 0 0 24828 3108 22645 209130;209131;209132 167004;167005;167006;167007 167005 4 IPNLLPEGSVDGDTR Unmodified 1581.7999 0.79985021 799 P05120 SERPINB2 Plasminogen activator inhibitor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 75.532 75.568 2 0.00013374 87048 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 89.403 85.549 67387000 0 0 0 16057000 4584700 5920800 2390800 8949300 4269900 5691700 5571800 6132000 4938700 2880800 0 24829 799 22646 209133;209134;209135;209136;209137;209138;209139;209140;209141;209142;209143 167008;167009;167010;167011;167012;167013;167014;167015;167016;167017;167018;167019 167014 12 IPNQFQSDPPAPSDK Unmodified 1639.7842 0.78420015 4610 Q9NRV9 HEBP1 Heme-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.862 46.031 2 5.5234E-27 50747 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 132.59 115.56 116640000 0 0 0 4219500 4224600 6574900 5612700 5670900 5212700 10085000 25378000 10231000 8039700 11518000 19871000 24830 4610 22647 209144;209145;209146;209147;209148;209149;209150;209151;209152;209153;209154;209155 167020;167021;167022;167023;167024;167025;167026;167027;167028;167029;167030;167031 167027 12 IPNRGIDLLK Unmodified 1137.687 0.68699271 1473 P43243 MATR3 Matrin-3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.33 56.455 3 0.015605 64166 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 45.653 17.448 339170000 0 0 0 14550000 12032000 25910000 23550000 29247000 24091000 25236000 35488000 35127000 36337000 26408000 51198000 24831 1473 22648 209156;209157;209158;209159;209160;209161;209162;209163;209164;209165;209166;209167 167032;167033;167034;167035;167036;167037;167038 167035 5 IPNSIIPALK Unmodified 1064.6594 0.65938097 2915 Q6P1A2 LPCAT3 Lysophospholipid acyltransferase 5 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 78.095 78.191 2 0.030285 90287 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 43.083 7.6381 21166000 0 0 0 0 1937400 1840400 0 2354400 0 3627700 2254000 3203300 0 2735300 3213100 24832 2915 22649 209168;209169;209170;209171;209172;209173;209174;209175 167039 167039 1 IPNSYEVLFPESPAR Unmodified 1717.8675 0.86753585 202 O14686 KMT2D Histone-lysine N-methyltransferase 2D yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.579 82.636 2 6.529E-05 94877 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 82.543 58.161 37241000 0 0 0 950460 1659900 2657400 2098700 3628000 3492700 5052200 3180100 5751500 3349700 0 5420700 24833 202 22650 209176;209177;209178;209179;209180;209181;209182;209183;209184;209185;209186;209187 167040;167041;167042;167043 167042 4 IPNSYEVLFPESPARAGTEPK Unmodified 2301.1641 0.1641118 202 O14686 KMT2D Histone-lysine N-methyltransferase 2D yes yes 0 0 1 By MS/MS 2 0 1 1 81.344 78.854 3 0.045447 95661 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 32.797 25.402 2135700 0 0 2135700 0 0 0 0 0 0 0 0 0 0 0 0 24834 202 22651 209188 167044 167044 1 IPNTELIHQSSPLLK Unmodified 1688.9461 0.94612052 3526 Q8TF46 DIS3L DIS3-like exonuclease 1 yes yes 0 0 0 By MS/MS 2 0 1 1 78.559 70.428 3 0.0076548 92569 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.242 22.664 7791000 7791000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24835 3526 22652 209189 167045 167045 1 IPNTVEEAVR Unmodified 1126.5982 0.59823728 2222 Q12996 CSTF3 Cleavage stimulation factor subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 45.656 46.002 2 0.0065119 50839 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 64.711 36.503 17711000 0 0 0 0 0 3922800 0 0 0 0 0 0 3068400 3574900 7144900 24836 2222 22653 209190;209191;209192;209193;209194 167046;167047;167048;167049 167049 4 IPPDATLIFEIELYAVTK Unmodified 2032.1132 0.11324543 5269 Q9Y680 FKBP7 Peptidyl-prolyl cis-trans isomerase FKBP7 yes yes 0 0 0 By MS/MS By matching 2.67 0.471 1 2 2 1 102.69 97.592 3 0.020298 103135 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 28.083 25.105 6267700 5891500 376180 0 0 0 0 0 0 0 0 0 0 0 0 0 24837 5269 22654 209195;209196;209197 167050;167051 167050 2 IPPEPPGRCSNHLQDK Unmodified 1843.8999 0.89991538 4907 Q9UHR5 SAP30BP SAP30-binding protein yes yes 0 0 1 By MS/MS 2 0 1 1 33.748 27.516 4 0.010618 38978 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 38.661 21.582 90918000 90918000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24838 4907 22655 209198 167052 167052 1 IPPGIPPGVPSR Unmodified 1185.687 0.68699271 1630 P50570 DNM2 Dynamin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 64.073 64.2 2 0.0037384 72745 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.643 33.621 55207000 0 0 0 0 3938800 9625000 0 4772900 0 0 5421200 0 9552200 6492300 15405000 24839 1630 22656 209199;209200;209201;209202;209203;209204;209205 167053;167054;167055;167056 167053 4 IPPLFPQK Unmodified 938.55894 0.55893865 3308 Q8N163 CCAR2 Cell cycle and apoptosis regulator protein 2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 68.664 68.824 2 0.035766 79408 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 52.299 15.205 7908300 0 0 0 0 0 0 0 0 0 0 0 0 3919500 3988800 0 24840 3308 22657 209206;209207 167057 167057 1 IPPNATLVFEVELFEFK Unmodified 1992.0608 0.060815928 2080 Q02790 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 101.54 97.082 3 0.00013939 120889 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.522 54.127 27544000 19622000 7034400 887480 0 0 0 0 0 0 0 0 0 0 0 0 24841 2080 22658 209208;209209;209210;209211;209212 167058;167059;167060;167061;167062 167058 5 IPPPVIMVQNVSFK Unmodified 1567.8796 0.87962086 4879 Q9UG63 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.12 2.45 2 1 23 1 2 1 2 2 2 2 2 2 2 2 2 2 2 88.359 87.812 2;3 0.00045123 110186 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.622 64.727 172240000 9467900 15601000 0 1177600 6587500 13017000 6108300 14331000 7061100 15501000 12852000 13158000 5775300 9783700 41823000 24842 4879 22659 209213;209214;209215;209216;209217;209218;209219;209220;209221;209222;209223;209224;209225;209226;209227;209228;209229;209230;209231;209232;209233;209234;209235;209236;209237;209238 167063;167064;167065;167066;167067;167068;167069;167070;167071;167072;167073;167074;167075;167076;167077;167078;167079;167080;167081;167082;167083 167070 18 IPPPVIMVQNVSFK Oxidation (M) 1583.8745 0.87453548 4879 Q9UG63 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 16 1 1 1 1 1 2 2 1 2 1 1 2 81.993 82.078 2;3 6.7926E-05 94929 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 80.312 75.046 192070000 0 0 0 3786900 6990900 11899000 9340300 10940000 16638000 35689000 12199000 28086000 7986800 10939000 37573000 24843 4879 22659 209239;209240;209241;209242;209243;209244;209245;209246;209247;209248;209249;209250;209251;209252;209253;209254 167084;167085;167086;167087;167088;167089;167090;167091;167092;167093;167094 167090 6227 4 IPPSEMFLSETDK Oxidation (M) 1508.7069 0.70686103 1579 P49589 CARS Cysteine--tRNA ligase, cytoplasmic yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.24 2 1 10 2 1 1 1 1 1 1 1 1 1 1 1 63.565 62.523 2 5.0468E-21 79510 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.3 84.886 211620000 0 147830000 7487600 1229200 3483700 4654600 0 6437900 3702300 5857900 6133900 8954500 5079900 0 10766000 24844 1579 22660 209255;209256;209257;209258;209259;209260;209261;209262;209263;209264;209265;209266;209267 167095;167096;167097;167098;167099;167100;167101;167102;167103 167097 2545 8 IPPSEMFLSETDK Unmodified 1492.7119 0.71194641 1579 P49589 CARS Cysteine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 5.57 3.85 3 1 3 1 2 1 1 1 1 76.862 74.253 2 2.2168E-13 93055 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.1 105.79 919130000 13888000 870090000 7057100 0 0 0 0 0 0 0 7167900 0 0 7609900 13314000 24845 1579 22660 209268;209269;209270;209271;209272;209273;209274 167104;167105;167106;167107;167108;167109;167110;167111 167104 8 IPPSSAPTVLSVPAGTTIVK Unmodified 1934.1088 0.10882875 1663 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.89 2.72 3 1 24 3 1 2 2 2 2 2 2 2 2 2 2 2 2 82.292 81.801 2;3 7.0587E-61 94606 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 166.09 136.08 1158300000 0 210430000 1182700 42519000 60667000 71725000 67105000 80035000 61256000 92059000 78430000 123170000 61127000 90209000 118390000 24846 1663 22661 209275;209276;209277;209278;209279;209280;209281;209282;209283;209284;209285;209286;209287;209288;209289;209290;209291;209292;209293;209294;209295;209296;209297;209298;209299;209300;209301;209302 167112;167113;167114;167115;167116;167117;167118;167119;167120;167121;167122;167123;167124;167125;167126;167127;167128;167129 167114 6 IPQAALAK Unmodified 810.49634 0.49633839 3133 Q86TB9 PATL1 Protein PAT1 homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.101 30.306 2 0.0071407 32483 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 90.661 49.359 402190000 0 0 0 20573000 23958000 36040000 0 34107000 22133000 40903000 34062000 52392000 50681000 39430000 47912000 24847 3133 22662 209303;209304;209305;209306;209307;209308;209309;209310;209311;209312;209313;209314 167130;167131;167132;167133;167134;167135;167136;167137;167138;167139;167140 167135 10 IPQALEK Unmodified 797.4647 0.46470391 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 28.466 27.292 2 0.021005 29666 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 107.43 25.167 3536300000 39248000 827980000 47191000 133120000 163210000 188740000 223750000 187150000 166480000 223810000 247420000 341090000 262780000 223240000 261120000 24848 2290 22663 209315;209316;209317;209318;209319;209320;209321;209322;209323;209324;209325;209326;209327;209328;209329;209330;209331 167141;167142;167143;167144;167145;167146;167147;167148;167149;167150;167151;167152;167153;167154;167155;167156 167141 12 IPQDGDYEFLK Unmodified 1323.6347 0.63468237 2227 Q13043 STK4 Serine/threonine-protein kinase 4;Serine/threonine-protein kinase 4 37kDa subunit;Serine/threonine-protein kinase 4 18kDa subunit yes yes 0 0 0 By MS/MS 10 0 1 1 68.078 68.478 2 0.037089 78533 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.064 43.913 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24849 2227 22664 209332 167157 167157 1 IPQDRPTSEELLK Unmodified 1524.8148 0.814772 3057 Q7L7X3 TAOK1 Serine/threonine-protein kinase TAO1 yes yes 0 0 1 By MS/MS 2 0 1 1 49.865 45.95 3 0.0033086 58128 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 63.76 63.76 14388000 0 0 14388000 0 0 0 0 0 0 0 0 0 0 0 0 24850 3057 22665 209333 167158 167158 1 IPQELNNITK Unmodified 1168.6452 0.64518747 4822 Q9P2N5 RBM27 RNA-binding protein 27 yes yes 0 0 0 By MS/MS 2 0 1 1 57.222 51.4 2 0.0037073 66225 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.111 56.715 26833000 0 26833000 0 0 0 0 0 0 0 0 0 0 0 0 0 24851 4822 22666 209334 167159 167159 1 IPQLAPPASDSTVTK Unmodified 1523.8195 0.81952302 2604 Q16513 PKN2 Serine/threonine-protein kinase N2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.483 60.588 2 5.725E-10 69213 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 95.477 82.861 520570000 0 0 0 29045000 28341000 50186000 38691000 32827000 25514000 48271000 56796000 53268000 49170000 42471000 65986000 24852 2604 22667 209335;209336;209337;209338;209339;209340;209341;209342;209343;209344;209345;209346 167160;167161;167162;167163;167164;167165;167166;167167;167168;167169;167170;167171;167172 167169 13 IPQLPEDLFK Unmodified 1198.6598 0.6597749 4290 Q9C0E2 XPO4 Exportin-4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 87.226 86.401 2 0.0043836 107811 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.886 74.505 76980000 0 59391000 2201000 0 0 1552000 0 0 0 2935100 2597900 2324600 0 1438300 4539900 24853 4290 22668 209347;209348;209349;209350;209351;209352;209353;209354 167173;167174;167175;167176;167177 167176 5 IPQNPSPHTHQQQNAPVTVIQSK Unmodified 2548.3146 0.31463264 2852 Q68CP9 ARID2 AT-rich interactive domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 2 1 1 2 1 1 1 2 1 2 2 1 41.216 41.378 3;4 8.1047E-09 46185 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 62.847 54.171 263990000 0 0 0 19083000 10621000 23185000 20346000 17275000 11970000 20920000 22135000 22722000 39098000 23710000 32928000 24854 2852 22669 209355;209356;209357;209358;209359;209360;209361;209362;209363;209364;209365;209366;209367;209368;209369;209370;209371 167178;167179;167180;167181;167182;167183;167184;167185;167186;167187;167188;167189;167190;167191;167192;167193;167194 167178 17 IPQQLESK Unmodified 941.5182 0.51819605 437 O60841 EIF5B Eukaryotic translation initiation factor 5B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 25.385 24.927 2 0.0053211 25087 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.29 46.817 669040000 0 105240000 0 0 10652000 18935000 55922000 55519000 36905000 60858000 46753000 77204000 71169000 49212000 80676000 24855 437 22670 209372;209373;209374;209375;209376;209377;209378;209379;209380;209381;209382;209383;209384 167195;167196;167197;167198;167199;167200;167201;167202;167203;167204;167205 167199 10 IPQQNSESAMAK Unmodified 1302.6238 0.6238001 4314 Q9H074 PAIP1 Polyadenylate-binding protein-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 20.934 20.456 2 2.8207E-15 25009 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 165.18 147.31 255730000 0 119650000 0 0 6507700 8912600 8875300 6855700 7348900 14542000 23742000 15295000 0 13402000 30608000 24856 4314 22671 209385;209386;209387;209388;209389;209390;209391;209392;209393;209394;209395;209396;209397 167206;167207;167208;167209;167210;167211;167212;167213;167214;167215;167216;167217;167218;167219;167220;167221 167211 15 IPQQNSESAMAK Oxidation (M) 1318.6187 0.61871473 4314 Q9H074 PAIP1 Polyadenylate-binding protein-interacting protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 2 1 1 11.516 10.899 2 1.5468E-07 9332 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 123.75 109.54 100160000 9465300 31823000 0 2342300 2172000 4396800 5908700 2770700 3738000 5718000 0 8179600 6267400 5620000 11754000 24857 4314 22671 209398;209399;209400;209401;209402;209403;209404;209405;209406;209407;209408;209409;209410;209411;209412 167222;167223;167224;167225;167226;167227;167228;167229 167225 5777 5 IPRDLFEDELVPLFEK Unmodified 1959.0353 0.035329459 407 O60506 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 97.66 93.227 3 1.869E-62 116397 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 148.41 144.06 335280000 265250000 66059000 3969500 0 0 0 0 0 0 0 0 0 0 0 0 24858 407 22672 209413;209414;209415;209416;209417 167230;167231;167232;167233;167234;167235;167236;167237 167235 8 IPRDLYEDELVPLFEK Unmodified 1975.0302 0.030244081 322 O43390 HNRNPR Heterogeneous nuclear ribonucleoprotein R yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 2 2 2 2 93.882 88.947 3 4.3345E-07 112260 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.05 101.05 269050000 216190000 52857000 0 0 0 0 0 0 0 0 0 0 0 0 0 24859 322 22673 209418;209419;209420;209421 167238;167239;167240;167241;167242 167242 4 IPRHELTEISNVDVETQSGK Unmodified 2251.1444 0.14443899 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 1 By MS/MS 2 0 2 2 65.392 57.104 3;4 1.6092E-17 76664 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 102.07 93.78 54869000 54869000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24860 2172 22674 209422;209423 167243;167244;167245;167246 167243 4 IPRPSVSQGCSR Unmodified 1342.6776 0.67756701 456 O75122 CLASP2 CLIP-associating protein 2 yes yes 0 0 1 By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 24.752 24.894 3 0.029728 26334 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 26.627 16.575 43395000 0 0 0 5213700 3644400 5431800 4402200 3268100 4219800 3609300 4994200 0 0 2479900 6131700 24861 456 22675 209424;209425;209426;209427;209428;209429;209430;209431;209432;209433 167247 167247 1 IPSDLLDK Unmodified 899.4964 0.49639797 2994 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 50.845 50.997 2 0.0068326 57737 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 94.806 34.158 478510000 0 0 0 27355000 32225000 34062000 38675000 33755000 34812000 40695000 47409000 51101000 50826000 38103000 49494000 24862 2994 22676 209434;209435;209436;209437;209438;209439;209440;209441;209442;209443;209444;209445 167248;167249;167250;167251;167252;167253;167254;167255;167256 167250 9 IPSEQEQLR Unmodified 1098.5669 0.56693715 3683 Q92900 UPF1 Regulator of nonsense transcripts 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.472 28.666 2 0.0078297 29648 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 71.379 37.583 213590000 0 0 0 10832000 7875400 14992000 11872000 11071000 10752000 23322000 25634000 27612000 22053000 19550000 28019000 24863 3683 22677 209446;209447;209448;209449;209450;209451;209452;209453;209454;209455;209456;209457 167257;167258;167259;167260;167261;167262;167263;167264;167265;167266;167267;167268;167269;167270 167265 14 IPSFFPSPEEPPSPSAPSIAK Unmodified 2181.0994 0.099386279 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 2 2 2 2 2 2 86.155 86.262 2;3 1.3963E-07 100002 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 99.941 92.571 142120000 0 0 0 0 7103900 9105000 9199100 11704000 8579900 20167000 14578000 15379000 10562000 10884000 24860000 24864 2193 22678 209458;209459;209460;209461;209462;209463;209464;209465;209466;209467;209468;209469;209470;209471;209472;209473;209474;209475;209476;209477;209478;209479 167271;167272;167273;167274;167275;167276;167277;167278;167279;167280;167281;167282;167283;167284;167285;167286;167287 167274 17 IPSGQPETADVSREQVDK Unmodified 1954.9596 0.95959833 3137 Q86TP1 PRUNE Protein prune homolog yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 40.593 35.717 3 7.881E-05 46464 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.783 45.193 35146000 0 35146000 0 0 0 0 0 0 0 0 0 0 0 0 0 24865 3137 22679 209480;209481 167288 167288 1 IPSIVSSPLNSPLDR Unmodified 1593.8726 0.87262123 1600 P49790 NUP153 Nuclear pore complex protein Nup153 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 81.975 82.019 2 0.020019 95346 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 32.999 18.841 21994000 0 0 0 1341200 1607900 1923300 822990 0 1559300 2382500 2127000 4142900 1376200 0 4710500 24866 1600 22680 209482;209483;209484;209485;209486;209487;209488;209489;209490;209491 167289;167290 167289 2 IPSNPLEADILAMAEMIAEAEELDK Oxidation (M) 2728.3187 0.31869947 2390 Q14202 ZMYM3 Zinc finger MYM-type protein 3 yes yes 0 1 0 By MS/MS 2 0 1 1 106.06 101.31 3 3.1127E-56 125102 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.2 113.99 4069100 0 4069100 0 0 0 0 0 0 0 0 0 0 0 0 0 24867 2390 22681 209492 167291 167291 3883 1 IPSNPLEADILAMAEMIAEAEELDK Unmodified 2712.3238 0.32378484 2390 Q14202 ZMYM3 Zinc finger MYM-type protein 3 yes yes 0 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 1 3 105.83 100.51 3 1.9192E-67 126595 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 127.38 124.45 24689000 11078000 13611000 0 0 0 0 0 0 0 0 0 0 0 0 0 24868 2390 22681 209493;209494;209495;209496 167292;167293;167294 167294 3 IPSPYTLSK Unmodified 1004.5542 0.5542472 5295 Q9Y6W3 CAPN7 Calpain-7 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 59.24 52.204 2 0.028352 70452 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.016 44.159 42721000 19414000 23306000 0 0 0 0 0 0 0 0 0 0 0 0 0 24869 5295 22682 209497;209498 167295 167295 1 IPSQPLDASASGDVSCVDEILK Unmodified 2300.1206 0.12059201 4894 Q9UHB7 AFF4 AF4/FMR2 family member 4 yes yes 0 0 0 By MS/MS 2 0 2 2 88.059 83.217 2;3 7.2958E-27 103500 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.39 120.86 39224000 0 39224000 0 0 0 0 0 0 0 0 0 0 0 0 0 24870 4894 22683 209499;209500 167296;167297 167297 1 IPSQQDALGGR Unmodified 1140.5887 0.58873523 1187 P25391 LAMA1 Laminin subunit alpha-1 yes yes 0 0 0 By MS/MS 10 0 1 1 32.06 32.056 2 0.0080158 34803 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 52.579 26.195 50755000 0 0 0 0 0 50755000 0 0 0 0 0 0 0 0 0 24871 1187 22684 209501 167298 167298 1 IPSRQQEELPIYSSDFEDVPNK Unmodified 2590.2551 0.25511165 4254 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 yes yes 0 0 1 By MS/MS 2 0 1 1 79.38 76.806 3 0.0015194 93227 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 46.833 44.071 5130100 0 0 5130100 0 0 0 0 0 0 0 0 0 0 0 0 24872 4254 22685 209502 167299 167299 1 IPSTDTQVQPK Unmodified 1212.635 0.63501672 5007 Q9ULV3 CIZ1 Cip1-interacting zinc finger protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.129 28.323 2 0.00031555 30141 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 101.65 79.56 122030000 0 0 0 6655000 6810600 7090700 10621000 9274800 5837800 11131000 15787000 14525000 10702000 8575600 15016000 24873 5007 22686 209503;209504;209505;209506;209507;209508;209509;209510;209511;209512;209513;209514 167300;167301;167302;167303;167304;167305;167306;167307;167308;167309;167310;167311 167305 12 IPSTENSSQEISVEER Unmodified 1803.8487 0.8486509 3999 Q96T58 SPEN Msx2-interacting protein yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 44.904 45.199 2 0.00015394 50820 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 83.314 69.156 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24874 3999 22687 209515;209516 167312;167313 167313 2 IPSVLFLGK Unmodified 972.6008 0.60080346 3236 Q8IW75 SERPINA12 Serpin A12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 83.103 83.166 2 0.0035332 96353 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 89.752 74.816 164310000 0 0 0 23759000 7675200 7166900 8535300 38688000 4564800 12563000 15787000 22358000 8991700 7301000 6924100 24875 3236 22688 209517;209518;209519;209520;209521;209522;209523;209524;209525;209526;209527;209528 167314;167315;167316;167317;167318;167319;167320;167321;167322;167323;167324 167323 11 IPTEAPQLELK Unmodified 1237.6918 0.69180331 2822 Q5VW32 BROX BRO1 domain-containing protein BROX yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 4 1 1 1 1 1 1 1 1 1 1 1 1 1 68.233 67.116 2 8.8513E-07 86366 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.33 83.555 3183500000 0 3045300000 16705000 5002000 3227600 15538000 6095100 4475700 4225600 8337200 12382000 14386000 5667100 11180000 31019000 24876 2822 22689 209529;209530;209531;209532;209533;209534;209535;209536;209537;209538;209539;209540;209541;209542;209543;209544;209545 167325;167326;167327;167328;167329;167330;167331;167332;167333;167334;167335;167336;167337;167338 167329 9 IPTGQEYAAK Unmodified 1076.5502 0.55022446 2316 Q13557 CAMK2D Calcium/calmodulin-dependent protein kinase type II subunit delta yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 29.593 24.609 2 0.0032556 32615 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.618 68.991 44014000 2835700 41179000 0 0 0 0 0 0 0 0 0 0 0 0 0 24877 2316 22690 209546;209547 167339;167340;167341 167341 3 IPTISTQLK Unmodified 999.59645 0.59644637 1073 P18206 VCL Vinculin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 57.498 57.595 2 0.0036824 64574 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 95.741 56.935 106780000 0 0 0 6856400 5572700 16942000 0 0 0 11626000 13230000 10886000 0 13265000 28399000 24878 1073 22691 209548;209549;209550;209551;209552;209553;209554;209555 167342;167343;167344;167345;167346;167347;167348 167346 6 IPTNDELLYDPEK Unmodified 1545.7563 0.75625407 2714 Q56P03 EAPP E2F-associated phosphoprotein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 70.03 68.906 2 1.2141E-33 86482 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 200.82 163.47 396730000 9227700 308610000 0 4982300 3618600 5589600 4787800 4030900 4076800 6274900 8088600 8941100 6183400 5899000 16423000 24879 2714 22692 209556;209557;209558;209559;209560;209561;209562;209563;209564;209565;209566;209567;209568;209569;209570 167349;167350;167351;167352;167353;167354;167355;167356;167357;167358;167359;167360;167361;167362 167352 14 IPTPIVGVK Unmodified 922.58515 0.5851534 1644 P51003 PAPOLA Poly(A) polymerase alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62.073 60.959 2 0.01424 78463 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.241 32.216 464880000 159700000 139950000 21642000 9913300 6015100 14398000 10337000 10967000 6264800 14165000 13521000 13581000 11612000 12228000 20584000 24880 1644 22693 209571;209572;209573;209574;209575;209576;209577;209578;209579;209580;209581;209582;209583;209584;209585 167363;167364;167365 167363 2 IPTPLNTSGVQVICMK Oxidation (M) 1772.9165 0.91647665 3786 Q96CW1 AP2M1 AP-2 complex subunit mu yes yes 0 1 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.781 76.831 2 0.00071033 88446 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.471 45.038 35279000 0 0 0 1993600 2063900 3384500 2419100 2723200 0 4379300 3071100 4910300 2166300 3081500 5085900 24881 3786 22694 209586;209587;209588;209589;209590;209591;209592;209593;209594;209595;209596 167366 167366 5330 1 IPTPLNTSGVQVICMK Unmodified 1756.9216 0.92156203 3786 Q96CW1 AP2M1 AP-2 complex subunit mu yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 82.277 82.388 2 5.9478E-06 94997 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.55 81.808 8901800 0 0 0 0 0 2285800 0 0 0 0 0 0 0 0 6616000 24882 3786 22694 209597;209598 167367 167367 1 IPTRPFEEGK Unmodified 1172.619 0.61897272 4458 Q9H8Y8 GORASP2 Golgi reassembly-stacking protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 34.041 34.301 3 0.025119 36892 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 31.758 14.736 125420000 0 0 0 0 6747200 14641000 0 13109000 11171000 0 26564000 20974000 0 587640 31622000 24883 4458 22695 209599;209600;209601;209602;209603;209604;209605;209606 167368;167369 167369 2 IPTTFENGR Unmodified 1033.5193 0.51925868 795 P05090 APOD Apolipoprotein D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.792 37.973 2 0.0071436 40898 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.208 46.077 322280000 0 0 0 69617000 22109000 17704000 15720000 30729000 14334000 38337000 28946000 28579000 24433000 17800000 13970000 24884 795 22696 209607;209608;209609;209610;209611;209612;209613;209614;209615;209616;209617;209618 167370;167371 167370 2 IPTYNISVVGLSGTEK Unmodified 1676.8985 0.89850163 4615 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 80.931 81.027 2 5.4783E-08 93762 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 107.14 96.039 38000000 0 0 0 0 1925600 4947700 3075800 1928400 0 5232600 3034000 5282600 2485700 2564300 7522900 24885 4615 22697 209619;209620;209621;209622;209623;209624;209625;209626;209627;209628 167372;167373;167374;167375;167376;167377;167378;167379;167380 167374 9 IPVDTYNNILTVLK Unmodified 1601.9029 0.90285872 3961 Q96QK1 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.56 3.62 4 1 11 1 3 1 1 1 1 1 1 1 1 1 1 1 1 92.238 90.846 2 1.1142E-44 113362 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 200.44 156.95 520240000 35448000 395720000 6289300 0 1752700 2489900 1789600 3045200 1957200 9355100 10665000 8876300 1855300 5878300 35119000 24886 3961 22698 209629;209630;209631;209632;209633;209634;209635;209636;209637;209638;209639;209640;209641;209642;209643;209644 167381;167382;167383;167384;167385;167386;167387;167388;167389;167390;167391;167392;167393;167394;167395 167382 15 IPVEGPLSPSRGDFPK Unmodified 1694.8992 0.89917033 165 O00512 BCL9 B-cell CLL/lymphoma 9 protein yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 66.468 66.765 3 0.045002 75817 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 32.252 21.147 34920000 0 0 0 0 0 0 0 0 3956600 0 5480000 5518400 2560100 4028800 13376000 24887 165 22699 209645;209646;209647;209648;209649;209650 167396 167396 0 IPVENILGEVGDGFK Unmodified 1585.8352 0.83517309 4445 Q9H845 ACAD9 Acyl-CoA dehydrogenase family member 9, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 95.869 91.048 3 0.00092312 112840 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 52.453 44.738 9858400 0 9858400 0 0 0 0 0 0 0 0 0 0 0 0 0 24888 4445 22700 209651 167397 167397 1 IPVFDAGHER Unmodified 1139.5724 0.57235688 4550 Q9NPF5 DMAP1 DNA methyltransferase 1-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.616 43.79 3 0.016148 47874 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 44.612 35.098 321700000 0 0 0 17668000 22911000 20126000 30840000 18489000 27732000 28736000 31520000 39334000 31040000 23329000 29980000 24889 4550 22701 209652;209653;209654;209655;209656;209657;209658;209659;209660;209661;209662;209663 167398;167399;167400 167400 1 IPVFDAGHERR Unmodified 1295.6735 0.67346791 4550 Q9NPF5 DMAP1 DNA methyltransferase 1-associated protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 36.171 36.483 3 0.030434 38676 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 29.936 13.798 51738000 0 0 0 0 0 6689200 3761100 4805300 0 4430500 0 7141400 9658700 5156400 10095000 24890 4550 22702 209664;209665;209666;209667;209668;209669;209670;209671 167401;167402;167403 167401 3 IPVGPETLGR Unmodified 1037.5869 0.58694431 823 P06576 ATP5B ATP synthase subunit beta, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 54.257 54.338 2 0.045608 60979 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 38.302 9.1529 70614000 0 0 0 17469000 6095000 0 9703200 9686300 0 0 0 8821600 0 7736500 11103000 24891 823 22703 209672;209673;209674;209675;209676;209677;209678 167404 167404 1 IPVHPNDHVNK Unmodified 1268.6626 0.66256887 854 P07954 FH Fumarate hydratase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 2.83 2.19 9 2 1 5 3 3 1 21.15 17.551 2;3 7.9289E-10 22805 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 166.07 122.26 3853100000 3031200000 205890000 607900000 0 0 0 0 0 0 0 0 0 0 0 8124400 24892 854 22704 209679;209680;209681;209682;209683;209684;209685;209686;209687;209688;209689;209690 167405;167406;167407;167408;167409;167410;167411;167412;167413;167414;167415;167416;167417;167418;167419;167420 167420 14 IPVINLEDGTR Unmodified 1225.6667 0.6666512 4814 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.037 72.106 2 0.0010106 83783 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 74.162 62.314 43668000 0 0 0 2371600 2372100 4013000 3511200 4853100 1880300 2938500 4451600 5103800 3059800 3127800 5985400 24893 4814 22705 209691;209692;209693;209694;209695;209696;209697;209698;209699;209700;209701;209702 167421;167422;167423;167424;167425;167426;167427;167428;167429 167429 9 IPVNSTGTDK Unmodified 1030.5295 0.52948901 2430 Q14680 MELK Maternal embryonic leucine zipper kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.048 15.219 2 0.0053332 13964 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.375 38.639 119660000 0 0 0 5436900 5657900 4998400 10196000 5283900 6968500 8457800 18340000 16901000 13258000 9604900 14556000 24894 2430 22706 209703;209704;209705;209706;209707;209708;209709;209710;209711;209712;209713;209714 167430;167431;167432;167433;167434 167430 5 IPVPINAELRK Unmodified 1248.7554 0.75540662 238 O14981 BTAF1 TATA-binding protein-associated factor 172 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 61.559 61.019 3 0.0048737 68494 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.523 14.222 130300000 27852000 0 0 5389800 4266100 13584000 8046000 7442500 4867600 10904000 9209400 10269000 7401200 7605000 13464000 24895 238 22707 209715;209716;209717;209718;209719;209720;209721;209722;209723;209724;209725;209726;209727 167435;167436;167437;167438;167439;167440;167441;167442;167443 167437 7 IPVQALLHLR Unmodified 1158.7237 0.72371257 1382 P36915 GNL1 Guanine nucleotide-binding protein-like 1 yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.812 79.915 3 0.0016054 91930 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.749 53.792 26542000 0 0 0 0 511270 2764800 931220 1284200 1309500 1768100 1648400 2326600 1423000 1264400 11311000 24896 1382 22708 209728;209729;209730;209731;209732;209733;209734;209735;209736;209737;209738 167444 167444 1 IPVQLVFK Unmodified 942.59024 0.59023878 2995 Q6YHK3 CD109 CD109 antigen yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 79.525 78.406 2 0.0068411 90355 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 94.407 44.817 273330000 38357000 14153000 4410500 9546200 14097000 14029000 11821000 17247000 11477000 24797000 20536000 28007000 15813000 20466000 28579000 24897 2995 22709 209739;209740;209741;209742;209743;209744;209745;209746;209747;209748;209749;209750;209751;209752;209753;209754 167445;167446;167447;167448;167449;167450;167451;167452;167453;167454;167455;167456;167457;167458;167459;167460 167453 16 IPVSGPFLVK Unmodified 1055.6379 0.63791725 153 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 80.354 76.817 2 0.015829 93260 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 67.993 48.478 34402000 0 27484000 6917900 0 0 0 0 0 0 0 0 0 0 0 0 24898 153 22710 209755;209756;209757 167461;167462 167462 2 IPVTDEEQTNVPYIYAIGDILEDK Unmodified 2734.3589 0.35890802 2641 Q16881 TXNRD1 Thioredoxin reductase 1, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 1 4 1 99.483 95.575 2;3 7.5271E-70 118248 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 139.49 129.15 386930000 7330900 376810000 2791200 0 0 0 0 0 0 0 0 0 0 0 0 24899 2641 22711 209758;209759;209760;209761;209762;209763 167463;167464;167465;167466;167467;167468 167465 5 IPVTLNMK Unmodified 914.52592 0.52592396 648 O95372 LYPLA2 Acyl-protein thioesterase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 58.693 58.802 2 0.022664 66985 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 60.972 40.273 73350000 0 0 0 3656600 2790100 10594000 4075000 4404600 0 6941500 8066800 8410000 4813300 6333300 13265000 24900 648 22712 209764;209765;209766;209767;209768;209769;209770;209771;209772;209773;209774 167469;167470;167471;167472;167473;167474 167469 6 IPWSALK Unmodified 813.47487 0.47487467 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.131 61.232 2 0.024152 68877 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.377 57.268 320810000 0 0 0 15299000 21934000 26110000 21002000 38480000 16790000 25835000 30062000 28794000 27133000 28408000 40966000 24901 2392 22713 209775;209776;209777;209778;209779;209780;209781;209782;209783;209784;209785;209786 167475;167476;167477;167478 167475 4 IPYLPITNFNQNWQDGK Unmodified 2047.0163 0.016325351 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS 10 0 1 1 90.437 90.575 2 0.011682 104941 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.706 30.074 2937200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2937200 24902 487 22714 209787 167479 167479 1 IPYQSPVSSSESAPGTIMNGHGGGR Unmodified 2485.1656 0.16558514 2779 Q5T6F2 UBAP2 Ubiquitin-associated protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 62.007 62.27 3 1.654E-34 70339 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 97.825 81.416 82312000 0 0 0 0 0 5045800 0 8720100 0 10681000 12917000 11111000 6081500 7113300 20643000 24903 2779 22715 209788;209789;209790;209791;209792;209793;209794;209795 167480;167481;167482;167483;167484;167485;167486;167487;167488;167489 167483 8 IPYTTVLR Unmodified 961.55967 0.55966693 2163 Q08945 SSRP1 FACT complex subunit SSRP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 59.352 59.418 2 0.015495 67576 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 68.787 32.907 99647000 0 0 0 6381000 6071400 9727700 9006000 8151000 7218800 8972900 14376000 12542000 9423100 7777400 0 24904 2163 22716 209796;209797;209798;209799;209800;209801;209802;209803;209804;209805;209806 167490;167491;167492 167490 3 IQAAASTPTNATAASDANTGDRGQTNNAASASASNST Unmodified 3464.5636 0.56360229 1605 P49841 GSK3B Glycogen synthase kinase-3 beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 38.644 38.885 3 2.8859E-10 42840 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 36.467 34.959 93640000 0 0 0 0 3504500 11047000 8013500 5198600 3720500 8569100 11652000 13778000 5911600 6254900 15990000 24905 1605 22717 209807;209808;209809;209810;209811;209812;209813;209814;209815;209816;209817 167493;167494;167495;167496 167496 4 IQACTQQGLSSK Unmodified 1319.6503 0.65034921 2793 Q5TBA9 FRY Protein furry homolog yes yes 0 0 0 By MS/MS 2 0 1 1 62.006 53.75 3 0.019962 72769 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 30.004 13.333 3412700 3412700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24906 2793 22718 209818 167497 167497 1 IQADGRDLNR Unmodified 1156.5949 0.59488324 3978 Q96RU2 USP28 Ubiquitin carboxyl-terminal hydrolase 28 yes yes 0 0 1 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 18.365 18.566 3 0.032132 17698 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.718 13.76 15730000 0 0 0 0 0 1910700 1702200 0 1339800 2005400 0 0 2310800 2616800 3844300 24907 3978 22719 209819;209820;209821;209822;209823;209824;209825 167498 167498 0 IQAEFEK Unmodified 863.43888 0.43888309 2202 Q12874 SF3A3 Splicing factor 3A subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.24 2 1 10 2 1 1 1 1 1 1 1 1 1 1 1 29.07 28.153 2 0.022382 35820 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.32 35.958 2107300000 0 1396400000 13966000 38469000 57311000 0 84079000 65581000 60067000 94760000 0 0 83524000 83345000 129800000 24908 2202 22720 209826;209827;209828;209829;209830;209831;209832;209833;209834;209835;209836;209837;209838 167499;167500;167501;167502;167503;167504;167505;167506;167507;167508;167509;167510 167502 12 IQAEHSESGQLVGVDLNTGEPMVAAEVGVWDNYCVK Unmodified 3900.8299 0.82985307 1410 P40227 CCT6A T-complex protein 1 subunit zeta yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 95.535 89.718 3 4.8314E-84 113960 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 109.97 106.67 47841000 47841000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24909 1410 22721 209839;209840 167511;167512 167512 2 IQAEHSESGQLVGVDLNTGEPMVAAEVGVWDNYCVK Oxidation (M) 3916.8248 0.8247677 1410 P40227 CCT6A T-complex protein 1 subunit zeta yes yes 0 1 0 By MS/MS 2 0 1 1 93.047 84.916 3 8.3793E-30 109976 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.244 64.483 16512000 16512000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24910 1410 22721 209841 167513 167513 2212 1 IQAGDPVAR Unmodified 925.49813 0.49812931 1087 P19388 POLR2E DNA-directed RNA polymerases I, II, and III subunit RPABC1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.916 24.121 2 0.01094 24636 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 63.565 9.4079 190510000 0 0 0 11697000 9538300 15282000 12791000 10032000 9083100 16126000 15344000 21223000 15736000 17351000 36305000 24911 1087 22722 209842;209843;209844;209845;209846;209847;209848;209849;209850;209851;209852;209853 167514;167515;167516;167517;167518;167519;167520;167521;167522;167523;167524 167522 11 IQAGEGETAVLNQLQEK Unmodified 1826.9374 0.93740633 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.55 3.8 3 2 6 4 1 1 1 1 1 1 1 74.019 72.362 2;3 0 89888 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 335.1 319.21 770500000 0 720420000 2741400 0 0 0 0 2779100 0 4939200 8786100 6826700 0 7908800 16101000 24912 2495 22723 209854;209855;209856;209857;209858;209859;209860;209861;209862;209863;209864 167525;167526;167527;167528;167529;167530;167531;167532;167533;167534;167535 167526 10 IQAGEIGEMK Unmodified 1074.5379 0.53794521 1044 P16989 YBX3 Y-box-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.554 41.731 2 0.0014272 46454 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 91.867 36.191 917140000 0 0 0 34327000 55930000 64092000 39666000 48667000 41726000 78679000 99086000 127820000 112760000 88423000 125970000 24913 1044 22724 209865;209866;209867;209868;209869;209870;209871;209872;209873;209874;209875;209876 167536;167537;167538;167539;167540;167541;167542;167543;167544;167545;167546;167547 167538 10 IQAGEIGEMK Oxidation (M) 1090.5329 0.53285983 1044 P16989 YBX3 Y-box-binding protein 3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.299 26.499 2 0.0011455 28127 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 102.62 46.075 286010000 0 0 0 16719000 24318000 24780000 21065000 14951000 15655000 26987000 25961000 37323000 31509000 25979000 20765000 24914 1044 22724 209877;209878;209879;209880;209881;209882;209883;209884;209885;209886;209887;209888 167548;167549;167550;167551;167552;167553;167554;167555;167556;167557;167558;167559 167552 1466 10 IQAGEVSQPSK Unmodified 1142.5932 0.5931519 4112 Q9BRP8 WIBG Partner of Y14 and mago yes yes 0 0 0 By matching By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 20.08 20.468 2 0.0034464 20041 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.048 16.752 105270000 0 0 0 0 0 0 0 8114300 0 0 33842000 0 13282000 23716000 26317000 24915 4112 22725 209889;209890;209891;209892;209893 167560 167560 0 IQAIAWAR Unmodified 927.52904 0.5290355 1061 P17812 CTPS1 CTP synthase 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 59.504 59.671 2 0.0099306 68119 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 81.297 34.946 162210000 0 0 0 7437100 0 14332000 9808300 9563700 9284500 13854000 17136000 17062000 14946000 13776000 35006000 24916 1061 22726 209894;209895;209896;209897;209898;209899;209900;209901;209902;209903;209904 167561;167562;167563;167564;167565;167566;167567;167568;167569;167570 167566 7 IQALAEETAQNLK Unmodified 1427.762 0.76200815 3284 Q8IYI6 EXOC8 Exocyst complex component 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.115 55.245 2 4.7743E-12 63305 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 123.79 106.28 108350000 0 0 0 7374600 6491200 8587700 6976600 9505200 5839400 10659000 11170000 11498000 8258400 7980100 14014000 24917 3284 22727 209905;209906;209907;209908;209909;209910;209911;209912;209913;209914;209915;209916 167571;167572;167573;167574;167575;167576;167577;167578;167579;167580;167581;167582;167583;167584 167584 14 IQALEAELQAVSHSK Unmodified 1622.8628 0.86278482 2155 Q08378 GOLGA3 Golgin subfamily A member 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 74.623 74.811 3 0.00066358 85689 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.728 47.751 51127000 0 0 0 0 0 0 2731900 3861500 4225200 9869500 10451000 0 0 4954200 15033000 24918 2155 22728 209917;209918;209919;209920;209921;209922;209923;209924 167585;167586;167587;167588;167589;167590 167586 5 IQALEEDLREK Unmodified 1342.7092 0.70924429 3992 Q96SN8 CDK5RAP2 CDK5 regulatory subunit-associated protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 45.176 45.42 3 0.0091037 49806 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.721 39.144 66396000 0 0 0 0 3313800 7170700 5393900 0 3922600 5183300 6615500 10748000 8148400 8450300 7449300 24919 3992 22729 209925;209926;209927;209928;209929;209930;209931;209932;209933;209934 167591;167592;167593;167594;167595;167596 167594 6 IQALESNLENLLTR Unmodified 1612.8784 0.87843489 398 O60343 TBC1D4 TBC1 domain family member 4 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 88.633 88.76 2 0.015744 102780 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.568 24.717 7749500 0 0 0 0 0 0 0 0 0 3409000 0 0 0 0 4340500 24920 398 22730 209935;209936 167597 167597 1 IQALGLGEDWNVEK Unmodified 1570.7991 0.79912193 2081 Q02809 PLOD1 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 83.244 79.627 2 0.00082032 98988 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.46 58.596 53506000 0 52369000 1136900 0 0 0 0 0 0 0 0 0 0 0 0 24921 2081 22731 209937;209938 167598 167598 1 IQALPTVPVTEEHVGSGLECPVCK Unmodified 2619.3037 0.30365852 4178 Q9BV68 RNF126 E3 ubiquitin-protein ligase RNF126 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 6.17 3.85 2 1 3 2 1 1 1 1 80.139 78.454 3 2.4536E-14 97747 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.373 69.913 415300000 0 390650000 4992000 0 0 0 0 0 0 0 0 0 4081300 6090000 9491800 24922 4178 22732 209939;209940;209941;209942;209943;209944 167599;167600;167601;167602;167603 167599 5 IQALQQQADEAEDR Unmodified 1613.7645 0.76452734 1957 P67936 TPM4 Tropomyosin alpha-4 chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 38.241 38.482 2 1.5068E-60 42443 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 202.16 191.64 205250000 0 0 0 0 7389600 10121000 7966900 6170500 4944100 10676000 34724000 28211000 18356000 25384000 51306000 24923 1957 22733 209945;209946;209947;209948;209949;209950;209951;209952;209953;209954;209955 167604;167605;167606;167607;167608;167609;167610;167611;167612;167613;167614 167609 11 IQALQQQADEAEDRAQGLQR Unmodified 2267.1254 0.12543488 1957 P67936 TPM4 Tropomyosin alpha-4 chain yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59.567 59.393 3 2.1277E-71 67142 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 151.95 147.68 703410000 420510 0 5604500 8376300 17499000 29843000 15363000 28363000 16297000 34833000 88075000 80033000 31115000 71264000 276320000 24924 1957 22734 209956;209957;209958;209959;209960;209961;209962;209963;209964;209965;209966;209967;209968;209969 167615;167616;167617;167618;167619;167620;167621;167622;167623;167624;167625;167626;167627;167628;167629;167630;167631;167632 167625 18 IQAQFGPLAQLSPQER Unmodified 1781.9424 0.94243213 1669 P51692 STAT5B Signal transducer and activator of transcription 5B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 81.551 81.673 2 0.00078796 94507 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 72.089 56.2 13360000 0 0 0 0 0 2907200 0 0 0 0 0 3114700 0 2590800 4747600 24925 1669 22735 209970;209971;209972;209973 167633;167634;167635;167636 167633 1 IQAQNRVVSAPVGK Unmodified 1465.8365 0.83651049 2283 Q13416 ORC2 Origin recognition complex subunit 2 yes yes 0 0 1 By MS/MS 2 0 1 1 39.628 33.006 3 0.00077755 45804 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.524 32.469 17077000 17077000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24926 2283 22736 209974 167637 167637 1 IQASTMAFK Oxidation (M) 1011.5059 0.5059168 1391 P37802 TAGLN2 Transgelin-2 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.73 3.94 1 7 1 13 5 4 1 1 1 1 1 1 1 1 1 1 1 2 36.102 35.321 2 0.0022349 33587 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 105.14 76.713 4958200000 1015300000 2977200000 0 43582000 38320000 62275000 77034000 40561000 39592000 80424000 128150000 109800000 65439000 92809000 187750000 24927 1391 22737 209975;209976;209977;209978;209979;209980;209981;209982;209983;209984;209985;209986;209987;209988;209989;209990;209991;209992;209993;209994;209995;209996 167638;167639;167640;167641;167642;167643;167644;167645;167646;167647;167648;167649;167650;167651;167652;167653;167654;167655;167656;167657;167658;167659;167660;167661;167662;167663;167664 167647 2154 27 IQASTMAFK Unmodified 995.511 0.51100218 1391 P37802 TAGLN2 Transgelin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 6.94 3.84 6 1 11 2 4 1 1 1 1 1 1 1 1 1 1 1 1 46.382 44.329 2 0.0012735 57813 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.27 81.036 11815000000 2351700000 7943900000 100690000 68787000 59314000 112600000 85670000 89998000 73882000 111930000 249530000 230820000 124960000 211320000 0 24928 1391 22737 209997;209998;209999;210000;210001;210002;210003;210004;210005;210006;210007;210008;210009;210010;210011;210012;210013;210014 167665;167666;167667;167668;167669;167670;167671;167672;167673;167674;167675;167676;167677;167678;167679;167680;167681 167669 14 IQAYDYLECSAK Unmodified 1459.6653 0.66533057 1907 P62745 RHOB Rho-related GTP-binding protein RhoB yes yes 0 0 0 By MS/MS 10 0 1 1 63.012 63.479 2 0.037396 72450 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.981 38.457 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24929 1907 22738 210015 167682 167682 1 IQDAGPASR Unmodified 913.46174 0.4617438 3073 Q7Z2W4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 10.251 10.381 2 0.0052332 8863 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 79.474 24.033 52747000 0 0 0 0 3691500 4883400 6771700 5718400 4602300 6611300 0 13636000 3147700 0 3684500 24930 3073 22739 210016;210017;210018;210019;210020;210021;210022;210023;210024;210025 167683;167684;167685;167686;167687;167688 167686 5 IQDDEFVVNYCLK Unmodified 1641.7709 0.77085827 1636 P50748 KNTC1 Kinetochore-associated protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 82.298 77.594 2 0.00080865 96463 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.93 85.722 41779000 0 41779000 0 0 0 0 0 0 0 0 0 0 0 0 0 24931 1636 22740 210026 167689 167689 1 IQDEGVVLESEETNQTNK Unmodified 2031.9597 0.95965791 4692 Q9NW75 GPATCH2 G patch domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.686 51.835 2 4.4306E-33 57460 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 160.87 148.1 130340000 0 0 0 5777100 5603400 15725000 7514300 7935600 9024400 12343000 15339000 14326000 10457000 9468400 16832000 24932 4692 22741 210027;210028;210029;210030;210031;210032;210033;210034;210035;210036;210037;210038 167690;167691;167692;167693;167694;167695;167696;167697;167698;167699;167700;167701 167693 12 IQDFNDTFYR Unmodified 1317.599 0.59896556 3481 Q8TBC4 UBA3 NEDD8-activating enzyme E1 catalytic subunit yes yes 0 0 0 By MS/MS 10 0 1 1 63.895 64.459 2 0.045814 73136 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.819 36.109 7697300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7697300 24933 3481 22742 210039 167702 167702 1 IQDGLGELK Unmodified 971.52876 0.52876073 2328 Q13616 CUL1 Cullin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 46.054 46.392 2 0.023837 52449 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 87.308 18.393 136710000 0 0 0 0 0 22452000 8128800 0 10238000 16211000 19796000 15377000 11081000 0 33429000 24934 2328 22743 210040;210041;210042;210043;210044;210045;210046;210047 167703;167704;167705;167706;167707 167703 0 IQDHQVVINCAIPK Unmodified 1633.861 0.86101068 3371 Q8N8S7 ENAH Protein enabled homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.71 3.56 4 1 12 1 2 2 1 1 1 1 1 1 1 1 1 1 1 1 56.68 55.21 2;3 0.00024798 72541 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.55 45.163 567510000 39492000 211150000 55736000 12327000 12582000 19818000 20335000 9665800 18852000 10726000 22900000 37170000 12573000 20015000 64172000 24935 3371 22744 210048;210049;210050;210051;210052;210053;210054;210055;210056;210057;210058;210059;210060;210061;210062;210063;210064 167708;167709;167710;167711;167712;167713;167714;167715;167716;167717;167718;167719;167720;167721;167722 167710 13 IQDIYEIHK Unmodified 1157.6081 0.60807369 2219 Q12979 ABR Active breakpoint cluster region-related protein yes yes 0 0 0 By MS/MS 2 0 1 1 47.334 43.453 2 0.019936 54800 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 75.854 49.252 2249400 0 0 2249400 0 0 0 0 0 0 0 0 0 0 0 0 24936 2219 22745 210065 167723 167723 1 IQDLEHHLGLALNEVQAAK Unmodified 2098.1171 0.11710203 5171 Q9Y3P9 RABGAP1 Rab GTPase-activating protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 83.945 79.225 4 0.0071927 98528 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 22.626 13.442 24319000 0 24319000 0 0 0 0 0 0 0 0 0 0 0 0 0 24937 5171 22746 210066 167724 167724 1 IQDLETELEK Unmodified 1216.6187 0.61869795 478 O75330 HMMR Hyaluronan mediated motility receptor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 56.349 56.476 2 0.00056703 64466 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 129.38 73.706 76760000 0 0 0 5554400 4549900 0 7647600 0 7346500 12974000 8529500 2080800 6675900 7602800 13798000 24938 478 22747 210067;210068;210069;210070;210071;210072;210073;210074;210075;210076;210077 167725;167726;167727;167728;167729;167730;167731;167732;167733;167734 167733 10 IQDLIDDK Unmodified 958.49713 0.49712625 2557 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 42.228 41.441 2 0.0052072 47309 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 115.49 54.522 2410800000 0 1733800000 5786800 27665000 29182000 82111000 42112000 40294000 31236000 72374000 65559000 69588000 54940000 48840000 107330000 24939 2557 22748 210078;210079;210080;210081;210082;210083;210084;210085;210086;210087;210088;210089;210090;210091;210092 167735;167736;167737;167738;167739;167740;167741;167742;167743;167744;167745;167746;167747;167748;167749;167750 167749 14 IQDLPPVDLSLVNK Unmodified 1549.8716 0.87155859 2629 Q16719 KYNU Kynureninase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 6.38 3.91 5 1 7 1 3 2 1 1 1 1 1 1 1 86.504 84.583 2;3 2.2546E-09 105321 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.13 104.66 1705100000 16850000 1595400000 12514000 0 0 0 2084600 0 0 3336800 13074000 9707500 3209700 9274100 39634000 24940 2629 22749 210093;210094;210095;210096;210097;210098;210099;210100;210101;210102;210103;210104;210105 167751;167752;167753;167754;167755;167756;167757;167758;167759;167760;167761;167762;167763 167752 10 IQDLSDNREK Unmodified 1216.6048 0.60477922 4260 Q9BZD4 NUF2 Kinetochore protein Nuf2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.42 1.93 1 11 1 1 1 1 1 1 1 1 1 1 1 1 13.453 13.301 3 0.0017752 11793 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 90.108 68.477 111670000 0 18358000 0 4598500 6117000 11181000 6624400 5780500 6012900 0 8108400 11042000 9700000 8860100 15289000 24941 4260 22750 210106;210107;210108;210109;210110;210111;210112;210113;210114;210115;210116;210117 167764;167765;167766;167767;167768;167769;167770;167771 167769 8 IQDMVAIR Oxidation (M) 960.50625 0.50625115 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 1 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 34.701 34.96 2 0.024579 37388 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.43 10.857 33199000 0 0 0 2884800 0 0 0 2786200 1977700 8035400 0 6062100 5299700 0 6153300 24942 2775 22751 210118;210119;210120;210121;210122;210123;210124 167772 167772 1 IQDPSPNELDLEK Unmodified 1496.7359 0.73585297 2301 Q13495 MAMLD1 Mastermind-like domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.376 60.481 2 1.4104E-08 68917 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 106.29 84.827 181390000 0 0 0 10574000 11757000 11061000 13657000 14074000 13306000 15027000 17025000 21052000 14334000 17282000 22238000 24943 2301 22752 210125;210126;210127;210128;210129;210130;210131;210132;210133;210134;210135;210136 167773;167774;167775;167776;167777;167778;167779;167780;167781;167782;167783;167784;167785 167774 13 IQDPVLQAVTSQTSLPGH Unmodified 1889.9847 0.98469087 4849 Q9UBP6 METTL1 tRNA (guanine-N(7)-)-methyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 82.992 83.07 3 0.0019876 96182 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 25.995 15.208 22990000 0 0 0 0 2795500 4638600 1571400 1433300 3078200 3077600 0 0 0 6395700 0 24944 4849 22753 210137;210138;210139;210140;210141;210142;210143 167786;167787 167786 1 IQDTNVTSEDK Unmodified 1248.5834 0.58337508 4413 Q9H6D7 HAUS4 HAUS augmin-like complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.868 17.047 2 2.0677E-05 16597 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 123.86 102.41 61996000 0 0 0 2896600 3950700 5079600 4263800 3378600 3707000 5670300 5411300 7557700 6172200 4889500 9018600 24945 4413 22754 210144;210145;210146;210147;210148;210149;210150;210151;210152;210153;210154;210155 167788;167789;167790;167791;167792;167793;167794;167795;167796;167797;167798 167797 11 IQDVGLVPMGGVMSGAVPAAAAQEAVEEDIPIAK Unmodified 3332.6996 0.69961417 1703 P52815 MRPL12 39S ribosomal protein L12, mitochondrial yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 98.481 94.46 3 6.0132E-16 116434 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 56.252 46.79 100040000 0 100040000 0 0 0 0 0 0 0 0 0 0 0 0 0 24946 1703 22755 210156;210157 167799;167800 167799 2 IQDWYDK Unmodified 966.4447 0.44469675 1354 P35527;CON__P35527 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.08 2.56 3 23 1 1 1 3 3 2 1 3 2 2 2 1 2 1 1 40.081 39.54 2 0.018587 42705 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 111.65 71.985 + 36088000000 50420000 1455500000 32839000 2834500000 2365400000 1793400000 1267000000 9317400000 1916200000 3111200000 2906600000 2927300000 3380900000 1205100000 1524700000 24947 1354 22756 210158;210159;210160;210161;210162;210163;210164;210165;210166;210167;210168;210169;210170;210171;210172;210173;210174;210175;210176;210177;210178;210179;210180;210181;210182;210183 167801;167802;167803;167804;167805;167806;167807;167808;167809;167810;167811;167812;167813;167814;167815;167816;167817;167818;167819;167820;167821;167822;167823;167824;167825;167826;167827;167828;167829;167830;167831 167813 31 IQDWYDKK Unmodified 1094.5397 0.53965977 1354 P35527;CON__P35527 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 1 By MS/MS 10 0 1 1 30.259 30.426 2 0.033515 33075 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 107.9 79.383 + 365180000 0 0 0 0 0 0 0 365180000 0 0 0 0 0 0 0 24948 1354 22757 210184 167832 167832 0 IQDYDVSLDK Unmodified 1194.5768 0.57683314 3702 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.947 49.105 2 0.0012139 55465 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 123.86 97.476 468550000 0 0 0 23447000 25688000 36800000 38775000 29119000 40069000 39703000 56904000 52264000 33124000 36526000 56133000 24949 3702 22758 210185;210186;210187;210188;210189;210190;210191;210192;210193;210194;210195;210196 167833;167834;167835;167836;167837;167838;167839;167840;167841;167842;167843;167844 167833 12 IQEAAVQSDRDR Unmodified 1386.6852 0.68515481 3132 Q86T82 USP37 Ubiquitin carboxyl-terminal hydrolase 37 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 8 1 1 1 2 1 1 1 14.078 14.159 3 0.016522 13931 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 38.402 14.111 34844000 0 0 0 0 3616000 3972600 4964600 6271300 2000100 7079400 0 0 0 6940500 0 24950 3132 22759 210197;210198;210199;210200;210201;210202;210203;210204 167845;167846;167847 167845 3 IQEAGTEVVK Unmodified 1072.5764 0.57643921 1423 P40926 MDH2 Malate dehydrogenase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 26.519 26.328 2 0.0018508 27819 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 96.342 37.425 123630000 0 11451000 0 24524000 3894900 4407900 4055600 7370500 2105800 4583600 13087000 18786000 0 8509900 20859000 24951 1423 22760 210205;210206;210207;210208;210209;210210;210211;210212;210213;210214;210215;210216 167848;167849;167850;167851;167852;167853;167854;167855;167856;167857;167858;167859 167857 10 IQEDPSLCGDK Unmodified 1260.5656 0.56561652 4785 Q9P000 COMMD9 COMM domain-containing protein 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 30.576 30.854 2 0.018484 32279 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.602 36.376 13772000 0 0 0 0 0 3969200 0 0 3415800 0 0 0 0 0 6387500 24952 4785 22761 210217;210218;210219 167860;167861;167862 167861 3 IQEDPSLCGDKPSISAVTVELSK Unmodified 2472.2418 0.24176977 4785 Q9P000 COMMD9 COMM domain-containing protein 9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.08 3.33 2 1 9 2 1 1 1 1 1 1 1 1 1 1 79.045 78.288 3 2.616E-23 93452 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 102.48 94.583 141620000 0 41649000 2171400 0 0 0 4222600 11637000 6012900 18305000 9609900 12103000 5171000 6483100 24251000 24953 4785 22762 210220;210221;210222;210223;210224;210225;210226;210227;210228;210229;210230;210231 167863;167864;167865;167866;167867;167868;167869;167870;167871;167872;167873;167874;167875;167876 167869 14 IQEEISQK Unmodified 973.50803 0.50802529 4538 Q9NP74 PALMD Palmdelphin yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 2 1 1 17.749 17.954 2 0.0068434 17087 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 94.302 15.786 65926000 0 0 0 5049500 3163500 3619900 4731600 4010100 0 0 8585900 23553000 5912800 7299900 0 24954 4538 22763 210232;210233;210234;210235;210236;210237;210238;210239;210240;210241 167877;167878;167879;167880;167881;167882;167883;167884;167885 167883 9 IQEENVIPR Unmodified 1096.5877 0.58767259 1464 P42704 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 2 43.457 43.713 2 0.020004 48147 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.493 28.495 76008000 0 0 0 18412000 0 0 0 5816300 0 20930000 0 0 0 0 30850000 24955 1464 22764 210242;210243;210244;210245;210246;210247;210248 167886;167887;167888;167889 167888 4 IQEENVIPREK Unmodified 1353.7252 0.72522871 1464 P42704 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 1 2 40.725 36.114 2;3 0.00072703 45737 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 112.36 78.979 90771000 10965000 0 79806000 0 0 0 0 0 0 0 0 0 0 0 0 24956 1464 22765 210249;210250;210251 167890;167891 167890 1 IQEFKPSNK Unmodified 1089.5819 0.58185893 3 A0AVT1 UBA6 Ubiquitin-like modifier-activating enzyme 6 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 23.344 18.843 2 0.014999 26705 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 146.69 87.776 81643000 69082000 12561000 0 0 0 0 0 0 0 0 0 0 0 0 0 24957 3 22766 210252;210253 167892 167892 0 IQEGVFDINNEANGIK Unmodified 1759.8741 0.87407779 1828 P61019 RAB2A Ras-related protein Rab-2A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 75.275 74.604 2 2.1117E-59 86230 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 206.58 145.22 1527300000 0 746910000 4157500 33602000 42496000 60994000 71585000 60010000 55210000 61760000 77939000 98525000 67108000 54805000 92168000 24958 1828 22767 210254;210255;210256;210257;210258;210259;210260;210261;210262;210263;210264;210265;210266;210267;210268 167893;167894;167895;167896;167897;167898;167899;167900;167901;167902;167903;167904;167905;167906;167907;167908;167909;167910;167911;167912;167913 167913 21 IQEHFNK Unmodified 914.46102 0.46101552 4655;5016 Q9NUU7;Q9UMR2 DDX19A;DDX19B ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX19B no no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 12.294 12.407 2 0.019328 11461 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 110.34 58.038 78669000 0 0 0 3768000 3940900 8727100 7466200 4669000 0 11422000 0 10319000 8799300 7121500 12436000 24959 4655;5016 22768 210269;210270;210271;210272;210273;210274;210275;210276;210277;210278 167914;167915;167916;167917;167918;167919 167915 6 IQEILTQVK Unmodified 1070.6336 0.63356015 153 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 3 6 1 1 1 1 1 1 1 1 1 56.259 53.613 2 0.017351 60805 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 87.639 25.093 1387000000 12517000 103150000 1959200 563840000 408890000 0 0 288370000 0 0 8295100 0 0 0 0 24960 153 22769 210279;210280;210281;210282;210283;210284;210285;210286;210287 167920;167921;167922;167923 167920 3 IQEIQTFR Unmodified 1033.5556 0.55564418 1408 P40123 CAP2 Adenylyl cyclase-associated protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 46.479 46.616 2 0.0089203 51900 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 84.568 21.726 59232000 0 0 0 3541200 2995200 6075100 4577900 0 0 6399900 9502700 11687000 0 0 14453000 24961 1408 22770 210288;210289;210290;210291;210292;210293;210294;210295;210296 167924;167925;167926;167927;167928;167929;167930;167931;167932 167930 9 IQELEDLLAK Unmodified 1170.6496 0.64960415 1111 P20700 LMNB1 Lamin-B1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 78.649 78.739 2 0.0015301 91080 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 105.52 39.169 105500000 0 0 0 8128400 0 0 6112600 7849200 0 13722000 14125000 13519000 8609800 12416000 21016000 24962 1111 22771 210297;210298;210299;210300;210301;210302;210303;210304;210305;210306 167933;167934;167935;167936;167937 167936 5 IQELEGQLDK Unmodified 1171.6085 0.60846762 1575 P49454 CENPF Centromere protein F yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 42.572 42.417 2 0.0075164 46330 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.867 31.43 15904000 0 0 0 3256500 3290100 0 4353300 0 0 0 0 0 5003700 0 0 24963 1575 22772 210307;210308;210309;210310;210311;210312 167938;167939;167940;167941 167939 4 IQELEMQAR Unmodified 1116.5597 0.55974328 1090 P19484 TFEB Transcription factor EB no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 41.498 41.74 2 0.0030491 45412 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.783 30.954 97904000 0 0 0 0 5092300 5806300 6395800 7304400 4467800 7667600 15961000 9490400 8940400 7114300 19664000 24964 1090 22773 210313;210314;210315;210316;210317;210318;210319;210320;210321;210322;210323 167942;167943;167944;167945;167946;167947;167948;167949;167950;167951;167952;167953 167945 12 IQELEMQAR Oxidation (M) 1132.5547 0.55465791 1090 P19484 TFEB Transcription factor EB no no 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 25.431 25.506 2 0.026756 27027 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 44.349 12.415 7095100 0 0 0 0 0 0 5591900 0 1503200 0 0 0 0 0 0 24965 1090 22773 210324;210325 167954 167954 1 IQELENLPGSLAGDLR Unmodified 1723.9105 0.9104633 1656 P51532 SMARCA4 Transcription activator BRG1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 84.563 84.731 2 0.00023005 98191 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 70.412 48.653 23264000 0 0 0 0 0 0 0 2925300 0 5541900 4384400 0 0 0 10413000 24966 1656 22774 210326;210327;210328;210329;210330 167955;167956;167957 167955 3 IQELENLPGSLPPDLR Unmodified 1789.9574 0.95741349 1655 P51531 SMARCA2 Probable global transcription activator SNF2L2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 83.505 83.547 2 0.010746 96867 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.659 38.772 11848000 0 0 0 0 1353100 4263800 0 1790900 0 0 0 0 0 0 4439700 24967 1655 22775 210331;210332;210333;210334 167958;167959;167960 167959 2 IQELFHVEPGLQR Unmodified 1564.8362 0.83617614 4002 Q96T88 UHRF1 E3 ubiquitin-protein ligase UHRF1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 72.225 72.355 3 0.0004489 83295 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 54.871 36.275 113370000 0 0 0 0 5753100 11742000 7280600 7380700 10008000 10461000 9709300 11347000 8310800 10863000 20514000 24968 4002 22776 210335;210336;210337;210338;210339;210340;210341;210342;210343;210344;210345 167961;167962;167963;167964;167965;167966;167967;167968;167969;167970;167971;167972 167966 12 IQELGDLYTPAPGR Unmodified 1528.7886 0.78855725 4700 Q9NWS0 PIH1D1 PIH1 domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.238 71.311 2 1.161E-12 81430 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.06 85.592 47451000 0 0 0 3514700 1982900 3512400 2408800 2855500 1929000 3974400 6188200 5570300 3037300 3557300 8920000 24969 4700 22777 210346;210347;210348;210349;210350;210351;210352;210353;210354;210355;210356;210357 167973;167974;167975;167976;167977;167978;167979;167980;167981;167982;167983;167984;167985 167976 13 IQELGDLYTPAPGRAESGPEK Unmodified 2227.1121 0.11207623 4700 Q9NWS0 PIH1D1 PIH1 domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 64.994 65.16 3 9.6557E-19 74487 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 83.936 74.682 66803000 0 0 0 0 5885900 0 0 0 0 0 0 15636000 11490000 10877000 22914000 24970 4700 22778 210358;210359;210360;210361;210362 167986;167987;167988;167989;167990 167989 2 IQELQASQEAR Unmodified 1271.647 0.64697839 5278 Q9Y6D9 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.142 28.336 2 7.6041E-90 30535 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 208.11 132.25 492570000 0 0 0 19687000 20867000 27611000 34023000 30973000 21254000 50857000 65359000 53489000 55117000 35591000 77746000 24971 5278 22779 210363;210364;210365;210366;210367;210368;210369;210370;210371;210372;210373;210374 167991;167992;167993;167994;167995;167996;167997;167998;167999;168000;168001;168002;168003 167993 13 IQELQASQEARADHEQQIK Unmodified 2221.1087 0.10872219 5278 Q9Y6D9 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS 7.62 3.58 3 1 9 1 1 2 1 1 1 1 1 1 1 1 1 35.883 34.71 3;4 7.3655E-06 44277 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 83.894 79.445 157980000 6719000 2353600 105370000 0 0 0 2360700 3493300 3344400 4546400 5846300 7358800 3897000 2254600 10432000 24972 5278 22780 210375;210376;210377;210378;210379;210380;210381;210382;210383;210384;210385;210386;210387 168004;168005;168006;168007;168008 168008 5 IQEMEER Unmodified 933.42258 0.4225811 3979 Q96RU3 FNBP1 Formin-binding protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 14.864 15.335 2 0.03183 14662 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 105.12 32.883 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24973 3979 22781 210388 168009 168009 1 IQEMQEASDHLK Unmodified 1427.6715 0.67147858 4580 Q9NQX4 MYO5C Unconventional myosin-Vc yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 34.88 34.554 3 0.0060091 37318 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 47.712 39.846 89599000 0 14583000 0 0 6480300 10829000 7792100 6594900 6315500 0 9958500 13714000 6512200 6819100 0 24974 4580 22782 210389;210390;210391;210392;210393;210394;210395;210396;210397;210398 168010;168011;168012;168013;168014;168015 168014 5 IQENALPLMLAEPPQNLIAQSQSGTGK Oxidation (M) 2863.475 0.47495761 5016 Q9UMR2 DDX19B ATP-dependent RNA helicase DDX19B yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.55 1 1 4 2 1 1 1 1 90.448 89.214 3 2.7121E-18 103866 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 61.488 58.425 93770000 0 48152000 0 0 0 0 0 7156600 3537700 22361000 12563000 0 0 0 0 24975 5016 22783 210399;210400;210401;210402;210403;210404 168016;168017;168018;168019;168020;168021 168021 6356 6 IQENALPLMLAEPPQNLIAQSQSGTGK Unmodified 2847.48 0.48004299 5016 Q9UMR2 DDX19B ATP-dependent RNA helicase DDX19B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 6.25 3.77 1 1 2 2 1 1 95.407 93.46 3 1.0934E-46 114699 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.17 99.957 104410000 0 99755000 0 0 0 0 0 0 0 1862900 0 0 0 0 2791100 24976 5016 22783 210405;210406;210407;210408 168022;168023;168024;168025 168022 4 IQENALPMMLAEPPQNLIAQSQSGTGK Oxidation (M) 2881.4314 0.43137823 4655 Q9NUU7 DDX19A ATP-dependent RNA helicase DDX19A yes yes 0 1 0 By MS/MS 2 0 1 1 92.763 87.853 3 9.3702E-11 108983 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.095 61.562 38984000 0 38984000 0 0 0 0 0 0 0 0 0 0 0 0 0 24977 4655 22784 210409 168026 168026 6070;6071 1 IQENALPMMLAEPPQNLIAQSQSGTGK 2 Oxidation (M) 2897.4263 0.42629286 4655 Q9NUU7 DDX19A ATP-dependent RNA helicase DDX19A yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 82.209 82.115 3 1.893E-50 94771 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.967 90.386 59589000 0 0 0 3775900 13199000 0 0 0 0 0 0 0 15370000 0 27245000 24978 4655 22784 210410;210411;210412;210413 168027 168027 6070;6071 1 IQENALPMMLAEPPQNLIAQSQSGTGK Unmodified 2865.4365 0.43646361 4655 Q9NUU7 DDX19A ATP-dependent RNA helicase DDX19A yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 95.685 91.647 3 0.04274 109670 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 17.149 13.249 103270000 0 103270000 0 0 0 0 0 0 0 0 0 0 0 0 0 24979 4655 22784 210414;210415 168028 168028 1 IQEPLFK Unmodified 873.496 0.49600404 2610 Q16537;Q15173 PPP2R5E;PPP2R5B Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform;Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit beta isoform yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 53.139 52.696 2 0.022247 68831 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.67 60.907 323160000 0 258310000 0 4827600 3762600 0 4767600 4785700 3792900 9385500 6438500 0 5716400 5735800 15639000 24980 2610 22785 210416;210417;210418;210419;210420;210421;210422;210423;210424;210425;210426 168029;168030;168031;168032;168033;168034;168035 168031 7 IQEQESSGEEDSDLSPEEREK Unmodified 2420.0463 0.046300668 1437 P41236;Q6NXS1 PPP1R2;PPP1R2P3 Protein phosphatase inhibitor 2;Protein phosphatase inhibitor 2-like protein 3 yes no 0 0 1 By MS/MS 10 0 1 1 30.509 31.212 3 0.00012407 32946 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.656 44.4 7580100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7580100 24981 1437 22786 210427 168036 168036 1 IQETQAELPR Unmodified 1183.6197 0.619701 2415 Q14566 MCM6 DNA replication licensing factor MCM6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.666 37.846 2 0.00093431 41889 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 128.36 85.763 257500000 0 0 0 9092500 9156900 16682000 13601000 9807800 9322800 17730000 30400000 34671000 24418000 26617000 56004000 24982 2415 22787 210428;210429;210430;210431;210432;210433;210434;210435;210436;210437;210438;210439 168037;168038;168039;168040;168041;168042;168043;168044;168045;168046;168047;168048;168049 168045 13 IQEVADELQK Unmodified 1171.6085 0.60846762 1071 P18085 ARF4 ADP-ribosylation factor 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.406 40.585 2 1.1518E-16 44925 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 169.12 60.662 3281100000 0 0 0 242110000 175870000 267520000 271000000 216300000 176670000 295370000 356740000 370530000 264180000 219400000 425420000 24983 1071 22788 210440;210441;210442;210443;210444;210445;210446;210447;210448;210449;210450;210451 168050;168051;168052;168053;168054;168055;168056;168057;168058;168059;168060;168061;168062;168063;168064;168065;168066;168067;168068 168052 19 IQEVFSSYK Unmodified 1099.555 0.55497548 1568 P49356 FNTB Protein farnesyltransferase subunit beta yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 55.172 49.825 2 0.01077 64371 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.676 50.043 114770000 0 114770000 0 0 0 0 0 0 0 0 0 0 0 0 0 24984 1568 22789 210452;210453 168069;168070 168069 2 IQEYEFTDDPIDVPR Unmodified 1835.8578 0.85775902 512 O75528 TADA3 Transcriptional adapter 3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 79.739 79.846 2 3.3752E-19 92034 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.08 87.16 43571000 0 0 0 0 3638000 0 0 3305900 3991100 5398900 6599400 8671400 2701400 2778600 6485900 24985 512 22790 210454;210455;210456;210457;210458;210459;210460;210461;210462;210463 168071;168072;168073;168074;168075;168076;168077;168078;168079 168073 9 IQFENNEDQDVNPLK Unmodified 1801.8483 0.84825697 624 O95163 IKBKAP Elongator complex protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 66.976 65.638 2 1.5391E-61 82620 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 186.02 167.75 605040000 16266000 409700000 1680600 6292400 9963100 14038000 11113000 11740000 7473300 18991000 18605000 17232000 15882000 16745000 29318000 24986 624 22791 210464;210465;210466;210467;210468;210469;210470;210471;210472;210473;210474;210475;210476;210477;210478;210479 168080;168081;168082;168083;168084;168085;168086;168087;168088;168089;168090;168091;168092;168093;168094;168095 168083 16 IQFKPDDGISPER Unmodified 1500.7573 0.75725712 3873 Q96I24 FUBP3 Far upstream element-binding protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.254 51.404 3 7.9707E-13 57735 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 127.02 95.421 655160000 0 0 0 30154000 23052000 45883000 42759000 39936000 37830000 60271000 62902000 61059000 61296000 49305000 140710000 24987 3873 22792 210480;210481;210482;210483;210484;210485;210486;210487;210488;210489;210490;210491 168096;168097;168098;168099;168100;168101;168102;168103;168104;168105;168106;168107;168108;168109;168110;168111 168105 14 IQFKPDDGTTPER Unmodified 1502.7365 0.73652168 3737 Q96AE4 FUBP1 Far upstream element-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 1 2 2 2 2 2 1 3 2 2 1 38.013 38.244 2;3 2.3532E-08 42259 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 97.69 75.197 2575500000 0 0 0 121870000 105850000 186630000 155500000 147810000 133270000 275320000 331710000 488700000 241670000 316060000 71085000 24988 3737 22793 210492;210493;210494;210495;210496;210497;210498;210499;210500;210501;210502;210503;210504;210505;210506;210507;210508;210509;210510;210511;210512 168112;168113;168114;168115;168116;168117;168118;168119;168120;168121;168122;168123;168124;168125;168126 168123 8 IQFVGACNPPTDPGR Unmodified 1627.7777 0.77767498 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 61.186 60.582 2 0.0018649 69536 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 60.161 42.726 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24989 2392 22794 210513;210514 168127;168128 168128 2 IQGDDWEPRPLR Unmodified 1480.7423 0.74227576 694 O95817 BAG3 BAG family molecular chaperone regulator 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 55.987 56.056 3 0.04562 63135 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 40.113 28.53 168090000 0 0 0 11710000 7916600 11705000 12698000 17305000 11141000 14441000 22737000 41903000 16533000 0 0 24990 694 22795 210515;210516;210517;210518;210519;210520;210521;210522;210523;210524 168129 168129 0 IQGIEEYKK Unmodified 1106.5972 0.59717465 5282 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes yes 0 0 1 By MS/MS 2 0 1 1 30.723 27.527 2 0.0055455 34903 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 107.9 51.774 6595700 0 0 6595700 0 0 0 0 0 0 0 0 0 0 0 0 24991 5282 22796 210525 168130 168130 0 IQGLDSSLSLQSR Unmodified 1402.7416 0.74160705 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.197 66.281 2 0.0067178 76432 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 93.258 55.171 234530000 0 0 0 8579700 16241000 16885000 17309000 20702000 11594000 24694000 18642000 35215000 21530000 20398000 22741000 24992 3023 22797 210526;210527;210528;210529;210530;210531;210532;210533;210534;210535;210536;210537 168131;168132;168133;168134;168135;168136 168135 0 IQGLDSSLSLQSRK Unmodified 1530.8366 0.83657007 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 56.237 55.719 3 0.00010987 63217 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 66.246 46.237 74667000 6567200 0 0 2919100 4228600 4363500 4819500 6652800 5366300 6206400 7819600 10119000 4275500 5093100 6236500 24993 3023 22798 210538;210539;210540;210541;210542;210543;210544;210545;210546;210547;210548;210549;210550 168137;168138;168139;168140;168141;168142;168143;168144;168145;168146;168147;168148;168149;168150 168145 14 IQGLEQR Unmodified 842.46102 0.46101552 1558 P49023 PXN Paxillin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 20.761 21.024 2 0.048847 21321 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.803 5.8221 114950000 0 0 0 0 4452000 0 6659100 6356900 4128700 12486000 14180000 17363000 14604000 12911000 21809000 24994 1558 22799 210551;210552;210553;210554;210555;210556;210557;210558;210559;210560 168151 168151 1 IQGLGLYAAK Unmodified 1032.5968 0.59678072 202 O14686 KMT2D Histone-lysine N-methyltransferase 2D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 59.983 60.169 2 0.012047 69404 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 53.166 26.37 30005000 0 0 0 0 1650500 0 0 4302200 0 2741300 0 5765100 5957200 3676700 5911500 24995 202 22800 210561;210562;210563;210564;210565;210566;210567 168152;168153 168153 2 IQGLTVEQAEAVVR Unmodified 1511.8308 0.83075641 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.691 75.752 2 7.1415E-117 87457 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 204.69 145.71 439360000 0 0 0 14479000 22413000 32157000 21746000 29420000 23237000 44352000 34487000 74740000 36015000 37477000 68840000 24996 2392 22801 210568;210569;210570;210571;210572;210573;210574;210575;210576;210577;210578;210579 168154;168155;168156;168157;168158;168159;168160;168161;168162;168163;168164;168165;168166;168167 168156 14 IQGSAGEIATSQER Unmodified 1445.711 0.71103521 4816 Q9P2E3 ZNFX1 NFX1-type zinc finger-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 29.718 29.999 2 0.0019503 31421 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.55 46.239 29978000 0 0 0 4251300 0 0 2728600 0 1750600 3048500 3490100 4008700 4133700 2279700 4287200 24997 4816 22802 210580;210581;210582;210583;210584;210585;210586;210587;210588 168168;168169;168170;168171;168172;168173 168170 6 IQGSAGEIATSQERLK Unmodified 1686.8901 0.89006221 4816 Q9P2E3 ZNFX1 NFX1-type zinc finger-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 44.427 39.906 3 0.0003719 50166 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 82.529 63.471 24719000 0 14525000 10193000 0 0 0 0 0 0 0 0 0 0 0 0 24998 4816 22803 210589;210590 168174;168175;168176 168176 3 IQHAVQLATEPLEK Unmodified 1575.8621 0.86205654 1579 P49589 CARS Cysteine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 64.408 56.129 3 0.00061864 75558 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.262 47.309 9788500 9788500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24999 1579 22804 210591;210592 168177;168178 168177 2 IQHEELNNR Unmodified 1151.5683 0.56833414 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 0 By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 10.164 10.323 3 0.0076359 9123 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 53.756 43.004 58287000 0 0 0 0 1903900 4540000 3472900 0 1871700 5408400 3156500 14113000 5720600 0 18101000 25000 2495 22805 210593;210594;210595;210596;210597;210598;210599;210600;210601 168179;168180;168181 168180 2 IQHEELNNRIQTTVTELQK Unmodified 2293.2026 0.20262257 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 1 By MS/MS 2 0 1 1 73.832 65.636 4 0.012329 86851 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 35.044 30.285 17432000 17432000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25001 2495 22806 210602 168182 168182 1 IQHILCTGNLCTK Unmodified 1556.7803 0.78031752 4850 Q9UBQ0 VPS29 Vacuolar protein sorting-associated protein 29 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 58.565 51.537 3 0.012733 66857 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 42.958 32.836 102490000 76317000 26172000 0 0 0 0 0 0 0 0 0 0 0 0 0 25002 4850 22807 210603;210604 168183;168184 168183 2 IQHMELQLIK Oxidation (M) 1267.6958 0.69584284 498 O75436 VPS26A Vacuolar protein sorting-associated protein 26A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 4.67 3.77 4 2 1 3 1 1 53.915 51.15 2;3 0.00070304 64761 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 99.568 65.693 219970000 0 94587000 99800000 0 0 0 0 0 0 8432000 0 0 0 0 17154000 25003 498 22808 210605;210606;210607;210608;210609;210610 168185;168186;168187;168188;168189 168189 647 4 IQHMELQLIK Unmodified 1251.7009 0.70092821 498 O75436 VPS26A Vacuolar protein sorting-associated protein 26A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.2 3.92 3 2 1 1 1 1 1 71.25 68.169 3 0.0013662 84965 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 89.171 43.17 332150000 243350000 52803000 6501300 0 0 0 0 0 0 0 0 0 0 4125000 25366000 25004 498 22808 210611;210612;210613;210614;210615 168190;168191;168192;168193 168193 4 IQHMQPSPQACNSAMK 2 Oxidation (M) 1858.8124 0.81242229 4348 Q9H1E1 RNASE7 Ribonuclease 7 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 13.252 13.233 3 0.00023578 12217 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 55.011 50.839 12723000 0 0 0 9176000 824790 0 1555500 0 0 0 0 0 0 1166100 0 25005 4348 22809 210616;210617;210618;210619 168194 168194 5811;5812 1 IQHMQPSPQACNSAMK Unmodified 1826.8226 0.82259304 4348 Q9H1E1 RNASE7 Ribonuclease 7 yes yes 0 0 0 By MS/MS 10 0 1 1 30.053 29.74 3 5.1451E-08 32492 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 73.758 69.209 26330000 0 0 0 26330000 0 0 0 0 0 0 0 0 0 0 0 25006 4348 22809 210620 168195 168195 1 IQHNGNCQLNEENLSTK Unmodified 1997.9225 0.92250132 3583 Q8WXA9 SREK1 Splicing regulatory glutamine/lysine-rich protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31.023 30.607 3 0.00013867 40193 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.54 65.839 164980000 0 9570800 5260600 7707500 9502500 10625000 8706700 8735200 9944000 19265000 11267000 18961000 13220000 13310000 18901000 25007 3583 22810 210621;210622;210623;210624;210625;210626;210627;210628;210629;210630;210631;210632;210633;210634 168196;168197;168198;168199;168200;168201;168202;168203;168204;168205;168206;168207;168208;168209;168210 168199 14 IQHQLESEK Unmodified 1110.5669 0.56693715 2142 Q07864 POLE DNA polymerase epsilon catalytic subunit A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 9.5999 9.7251 2 0.037906 8346 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 45.081 22.95 7248600 0 0 0 0 448380 900710 766870 0 0 0 0 1497600 1306900 819080 1509100 25008 2142 22811 210635;210636;210637;210638;210639;210640;210641 168211 168211 1 IQIADLMEEK Unmodified 1188.606 0.60602477 2627 Q16666;Q6K0P9 IFI16;PYHIN1 Gamma-interferon-inducible protein 16;Pyrin and HIN domain-containing protein 1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.42 1.93 1 11 1 1 1 1 1 1 1 1 1 1 1 1 77.416 77.175 2 0.0014693 89432 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 90.906 54.064 95914000 0 5289100 0 4086000 4997700 9809700 6094000 6946400 5705000 8789300 15122000 10311000 8172600 10591000 0 25009 2627 22812 210642;210643;210644;210645;210646;210647;210648;210649;210650;210651;210652;210653 168212;168213;168214;168215;168216;168217;168218;168219;168220;168221;168222 168219 9 IQIAPDSGGLPER Unmodified 1351.7096 0.70957864 3737 Q96AE4 FUBP1 Far upstream element-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.56 3 2 1 13 2 1 1 1 1 1 1 1 1 1 2 1 1 1 59.703 58.916 2 5.7789E-21 74389 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 133.89 106.64 2350500000 0 175900000 1008300 87358000 74817000 85850000 105070000 80504000 92335000 144950000 201080000 558460000 131110000 200410000 411660000 25010 3737 22813 210654;210655;210656;210657;210658;210659;210660;210661;210662;210663;210664;210665;210666;210667;210668;210669 168223;168224;168225;168226;168227;168228;168229;168230;168231;168232;168233;168234;168235;168236;168237 168226 15 IQIAPDSGGLPERSCMLTGTPESVQSAK Oxidation (M) 2944.427 0.42702114 3737 Q96AE4 FUBP1 Far upstream element-binding protein 1 yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 74.202 70.19 3 2.2734E-15 88067 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.294 66.578 115150000 0 50896000 64255000 0 0 0 0 0 0 0 0 0 0 0 0 25011 3737 22814 210670;210671 168238;168239;168240 168238 5310 3 IQIAPDSGGLPERSCMLTGTPESVQSAK Unmodified 2928.4321 0.43210651 3737 Q96AE4 FUBP1 Far upstream element-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.33 0.471 2 1 1 1 1 79.056 73.645 3 7.6606E-105 91391 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 145.87 136.54 135400000 51045000 0 84354000 0 0 0 0 0 0 0 0 0 0 0 0 25012 3737 22814 210672;210673;210674 168241;168242;168243 168243 3 IQIASESSGIPERPCVLTGTPESIEQAK Unmodified 2996.5125 0.51246533 3873 Q96I24 FUBP3 Far upstream element-binding protein 3 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 77.927 77.373 3 4.1536E-15 93766 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 73.805 68.085 29196000 0 0 11541000 0 0 5083900 0 4419300 8151800 0 0 0 0 0 0 25013 3873 22815 210675;210676;210677;210678 168244;168245;168246 168246 3 IQIGCHTDDLTRASK Unmodified 1713.8468 0.84681718 5194 Q9Y4C2 TCAF1 TRPM8 channel-associated factor 1 yes yes 0 0 1 By MS/MS 2 0 1 1 47.331 39.853 3 0.015638 55044 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 39.685 32.454 8339700 8339700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25014 5194 22816 210679 168247 168247 1 IQIIGLGTQVSQRPGAQALK Unmodified 2077.2008 0.20077208 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 75.966 76.078 3 1.2762E-10 87339 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.088 72.508 94803000 0 0 0 0 2685100 10381000 4483200 10343000 7602700 10843000 7178800 9879500 5828100 5599600 19978000 25015 3023 22817 210680;210681;210682;210683;210684;210685;210686;210687;210688;210689;210690 168248;168249;168250;168251;168252;168253;168254;168255;168256;168257;168258;168259 168252 12 IQIISTDSAVASPQR Unmodified 1584.8471 0.84713476 1559 P49116 NR2C2 Nuclear receptor subfamily 2 group C member 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.994 62.086 2 2.719E-07 70198 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 89.403 54.871 49309000 0 0 0 3243200 3419800 5721600 1362900 0 3675300 5228100 5145000 6732600 4312600 3919100 6548800 25016 1559 22818 210691;210692;210693;210694;210695;210696;210697;210698;210699;210700;210701;210702 168260;168261;168262;168263;168264;168265;168266;168267 168265 8 IQILEGWK Unmodified 985.55967 0.55966693 1023 P15559 NQO1 NAD(P)H dehydrogenase [quinone] 1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 75.954 76.159 2 0.0048222 87304 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 113.89 113.89 35505000 0 0 0 0 0 0 0 2144900 1627400 0 3419200 3930900 0 4017900 20365000 25017 1023 22819 210703;210704;210705;210706;210707;210708 168268;168269;168270;168271 168268 4 IQIPRPDDPSNQIK Unmodified 1619.8631 0.86311917 2033 Q00341 HDLBP Vigilin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 58.713 57.845 3 0.00026459 65750 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 72.417 37.733 887190000 0 138370000 53716000 32039000 33144000 72270000 54574000 33819000 41627000 66405000 64678000 74204000 60795000 62157000 99394000 25018 2033 22820 210709;210710;210711;210712;210713;210714;210715;210716;210717;210718;210719;210720;210721;210722;210723 168272;168273;168274;168275;168276;168277;168278;168279;168280;168281;168282;168283;168284;168285;168286;168287;168288;168289;168290;168291;168292;168293;168294;168295 168272 21 IQIQQLRGEDAVISAR Unmodified 1795.9904 0.99044495 3666 Q92817 EVPL Envoplakin yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 67.439 67.191 3 0.0025768 77800 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 44.196 17.467 7141900 0 0 0 4643200 0 0 0 2498800 0 0 0 0 0 0 0 25019 3666 22821 210724;210725 168296;168297 168297 2 IQISGSNYK Unmodified 1008.524 0.52400971 2022 P98170 XIAP E3 ubiquitin-protein ligase XIAP yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 36.175 30.537 2 0.027254 42580 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.95 22.579 64967000 8980000 55987000 0 0 0 0 0 0 0 0 0 0 0 0 0 25020 2022 22822 210726;210727 168298;168299;168300 168300 3 IQIVTALDHNTQGK Unmodified 1536.826 0.82600539 976 P13056 NR2C1 Nuclear receptor subfamily 2 group C member 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 66.091 58.985 3 0.00057138 78912 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.733 60.703 35034000 23349000 11685000 0 0 0 0 0 0 0 0 0 0 0 0 0 25021 976 22823 210728;210729 168301 168301 1 IQIVTAVDASGSPK Unmodified 1384.7562 0.75619449 1559 P49116 NR2C2 Nuclear receptor subfamily 2 group C member 2 yes yes 0 0 0 By MS/MS 2 0 1 1 65.977 60.059 2 3.8885E-18 76890 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.68 63.246 19012000 0 19012000 0 0 0 0 0 0 0 0 0 0 0 0 0 25022 1559 22824 210730 168302;168303 168302 2 IQIVTDQQTGQK Unmodified 1357.7201 0.72014333 1559 P49116 NR2C2 Nuclear receptor subfamily 2 group C member 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 2 1 1 1 1 1 1 1 1 35.888 36.071 2 0.0024486 39915 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 77.662 46.589 36912000 0 0 0 3344600 0 6511500 0 2985600 2387800 5119200 4144300 0 4587100 2886200 4945500 25023 1559 22825 210731;210732;210733;210734;210735;210736;210737;210738;210739;210740;210741 168304;168305;168306;168307;168308;168309;168310;168311;168312;168313 168309 10 IQKPNEVSSPPTTSAVIPPAVPQAQHLVAQPR Unmodified 3356.8205 0.82047308 3134 Q86TC9 MYPN Myopalladin yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.46 76.518 4 1.7183E-12 87517 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 43.554 41.649 196630000 0 0 0 2981100 9577300 11429000 11426000 24421000 7902700 24710000 18854000 24666000 14839000 12536000 33292000 25024 3134 22826 210742;210743;210744;210745;210746;210747;210748;210749;210750;210751;210752;210753 168314;168315;168316;168317;168318;168319;168320;168321 168320 7 IQLAEITSEK Unmodified 1130.6183 0.61830402 3242 Q8IWJ2 GCC2 GRIP and coiled-coil domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 59.262 58.38 2 0.0027078 75333 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.65 46.116 104740000 0 74675000 0 0 0 2643100 2811000 2052900 0 3834300 5454400 0 4121200 3856100 5293600 25025 3242 22827 210754;210755;210756;210757;210758;210759;210760;210761;210762;210763 168322;168323;168324;168325;168326;168327 168323 6 IQLEHHISPGDFPDCQK Unmodified 2019.9473 0.94725951 4777 Q9NZN4 EHD2 EH domain-containing protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 67.259 58.964 3 0.0021994 78877 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 32.511 20.419 9521800 9521800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25026 4777 22828 210764 168328 168328 1 IQLEQVQEWK Unmodified 1299.6823 0.68230126 2391 Q14203 DCTN1 Dynactin subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 69.389 68.804 2 3.7676E-08 78903 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 155.07 127.94 201760000 0 115990000 0 0 0 7048600 5234500 5975800 4632700 9513300 10081000 10609000 5308800 8704500 18660000 25027 2391 22829 210765;210766;210767;210768;210769;210770;210771;210772;210773;210774;210775;210776 168329;168330;168331;168332;168333;168334;168335;168336;168337 168333 9 IQLFLAR Unmodified 859.52797 0.52797287 3839 Q96FV9 THOC1 THO complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.419 74.484 2 0.023574 85100 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 92.692 25.699 82084000 0 0 0 3712200 5485900 7049000 4892700 6423500 4788500 6987100 6851000 8606400 7461500 7103200 12723000 25028 3839 22830 210777;210778;210779;210780;210781;210782;210783;210784;210785;210786;210787;210788 168338;168339;168340 168339 3 IQLIFER Unmodified 917.53345 0.53345218 2475 Q15020 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 74.237 74.139 2 0.03326 85312 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 72.138 18.584 12431000 0 0 0 0 5350700 0 0 7080100 0 0 0 0 0 0 0 25029 2475 22831 210789;210790 168341;168342 168341 2 IQLINNMLDK Oxidation (M) 1216.6486 0.64855829 733 P00558 PGK1 Phosphoglycerate kinase 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.3 3.85 15 3 12 7 7 4 1 1 1 1 1 1 1 1 1 1 1 1 63.328 60.781 2 7.6445E-11 79012 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 174.41 49.572 4958500000 1517800000 2525700000 279380000 16631000 11450000 9653700 13179000 14537000 7853800 13656000 109330000 90404000 10694000 84934000 253380000 25030 733 22832 210791;210792;210793;210794;210795;210796;210797;210798;210799;210800;210801;210802;210803;210804;210805;210806;210807;210808;210809;210810;210811;210812;210813;210814;210815;210816;210817;210818;210819;210820 168343;168344;168345;168346;168347;168348;168349;168350;168351;168352;168353;168354;168355;168356;168357;168358;168359;168360;168361;168362;168363;168364;168365;168366;168367;168368;168369;168370;168371;168372;168373;168374 168357 887 31 IQLINNMLDK Unmodified 1200.6536 0.65364367 733 P00558 PGK1 Phosphoglycerate kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.56 3.62 4 1 11 1 3 1 1 1 1 1 1 1 1 1 1 1 1 77.411 76.202 2 3.2512E-09 95176 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 159.37 107.37 8333400000 3723400000 3619400000 198130000 7739800 5264700 6708000 9649500 12651000 8685300 11096000 105770000 94277000 0 79899000 450740000 25031 733 22832 210821;210822;210823;210824;210825;210826;210827;210828;210829;210830;210831;210832;210833;210834;210835;210836 168375;168376;168377;168378;168379;168380;168381;168382;168383;168384;168385;168386;168387;168388;168389;168390;168391;168392;168393;168394 168378 19 IQLLDLPGIIEGAK Unmodified 1478.8708 0.87083031 5092 Q9Y295 DRG1 Developmentally-regulated GTP-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 5.2 3.92 3 2 1 2 1 1 98.243 93.873 2 0.00082015 116639 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.507 88.127 83875000 11862000 70677000 0 0 0 0 0 0 0 1335600 0 0 0 0 0 25032 5092 22833 210837;210838;210839;210840;210841 168395;168396;168397;168398;168399 168396 5 IQLLEAK Unmodified 813.496 0.49600404 3143 Q86U86 PBRM1 Protein polybromo-1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 48.285 48.059 2 0.025165 53077 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 81.32 15.233 104850000 0 2908300 0 5861900 1060000 9115600 7398400 6826400 6592800 11022000 8622100 12983000 10835000 9968700 11654000 25033 3143 22834 210842;210843;210844;210845;210846;210847;210848;210849;210850;210851;210852;210853;210854 168400;168401;168402;168403;168404;168405 168404 6 IQLLVFK Unmodified 859.55312 0.55312499 5084 Q9Y262 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.614 81.676 2 0.026085 94474 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 79.454 36.735 144160000 0 0 0 4220000 4980400 14116000 7680800 11521000 7730500 11043000 11286000 13178000 9288300 14165000 34947000 25034 5084 22835 210855;210856;210857;210858;210859;210860;210861;210862;210863;210864;210865;210866 168406;168407;168408;168409;168410;168411 168406 6 IQLPVVSK Unmodified 882.55385 0.55385327 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.546 62.644 2 0.02509 71360 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 58.981 29.832 86538000 0 0 0 6127500 5754400 5142000 6275500 8488600 3844300 7005900 11234000 8173700 7316200 6140100 11036000 25035 1492 22836 210867;210868;210869;210870;210871;210872;210873;210874;210875;210876;210877;210878 168412 168412 1 IQLSNQELLGDDQK Unmodified 1599.8104 0.8104149 2808 Q5VT06 CEP350 Centrosome-associated protein 350 yes yes 0 0 0 By MS/MS 2 0 1 1 68.448 62.548 2 0.018369 79873 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 47.57 22.134 14850000 0 14850000 0 0 0 0 0 0 0 0 0 0 0 0 0 25036 2808 22837 210879 168413 168413 1 IQLSSVPK Unmodified 870.51747 0.51746776 5199 Q9Y4F3 KIAA0430 Meiosis arrest female protein 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 41.339 41.847 2 0.029513 46379 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 56.091 2.0346 332210000 0 0 0 0 0 0 0 0 0 0 0 0 0 111940000 220270000 25037 5199 22838 210880;210881 168414;168415 168415 2 IQLVEEELDR Unmodified 1242.6456 0.6455814 1957;90;853;831;884 CON__Q3SX28;P06753;P07951;P09493;P67936 TPM3;TPM2;TPM1;TPM4 Tropomyosin alpha-3 chain;Tropomyosin beta chain;Tropomyosin alpha-1 chain;Tropomyosin alpha-4 chain no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 65.569 65.586 2 0.00088144 75444 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 118.18 76.068 + 93458000 0 0 0 6901200 6002000 5165700 6625400 6160500 4551000 8384100 0 20676000 10021000 18972000 0 25038 90;831;853;884;1957 22839 210882;210883;210884;210885;210886;210887;210888;210889;210890;210891 168416;168417;168418;168419;168420 168419 3 IQLVEEELDRAQER Unmodified 1726.885 0.88497683 1957;90;853;831;884 CON__Q3SX28;P06753;P07951;P09493;P67936 TPM3;TPM2;TPM1;TPM4 Tropomyosin alpha-3 chain;Tropomyosin beta chain;Tropomyosin alpha-1 chain;Tropomyosin alpha-4 chain no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 2 1 1 65.73 65.794 2;3 7.3795E-61 75259 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 155.42 139.28 + 1489900000 0 0 0 26552000 32407000 68126000 52913000 0 52600000 93863000 183180000 257570000 69211000 0 653520000 25039 90;831;853;884;1957 22840 210892;210893;210894;210895;210896;210897;210898;210899;210900;210901;210902;210903 168421;168422;168423;168424;168425;168426;168427;168428;168429;168430;168431;168432;168433;168434;168435 168428 14 IQLVGYSQK Unmodified 1034.576 0.57604528 4662 Q9NV88 INTS9 Integrator complex subunit 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 48.279 48.556 2 0.030461 53639 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.157 10.998 28583000 0 0 0 0 2941800 0 0 3850000 0 0 0 6022500 4400500 4161800 7206700 25040 4662 22841 210904;210905;210906;210907;210908;210909 168436 168436 1 IQMINGSDLPK Unmodified 1214.6329 0.63290823 3850 Q96GA3 LTV1 Protein LTV1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 63.037 63.341 2 0.0075484 71703 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.756 33.427 9508800 0 0 0 0 0 0 0 0 0 2684600 0 0 0 2767300 4056900 25041 3850 22842 210910;210911;210912 168437;168438;168439;168440 168439 3 IQMSNLMNQAR Unmodified 1304.6329 0.632925 1375 P36543 ATP6V1E1 V-type proton ATPase subunit E 1 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 61.037 61.123 2 0.0063685 68915 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 56.729 43.463 21709000 0 0 0 2509800 0 0 2377700 0 2171200 4285900 0 0 0 2396000 7968300 25042 1375 22843 210913;210914;210915;210916;210917;210918 168441;168442;168443;168444 168444 4 IQMSNLMNQAR 2 Oxidation (M) 1336.6228 0.62275425 1375 P36543 ATP6V1E1 V-type proton ATPase subunit E 1 yes yes 0 2 0 By MS/MS By MS/MS By matching By matching 10 0 4 1 1 1 1 21.102 21.109 2 0.0042419 22081 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 46.891 35.044 7603200 0 0 0 0 1264300 0 2097800 0 1107200 3133900 0 0 0 0 0 25043 1375 22843 210919;210920;210921;210922 168445 168445 2132;2133 1 IQMSYSVK Oxidation (M) 970.47937 0.4793677 4528 Q9HD45 TM9SF3 Transmembrane 9 superfamily member 3 yes yes 0 1 0 By MS/MS 2 0 1 1 27.421 23.116 2 0.044879 30511 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.88 36.542 9012400 0 9012400 0 0 0 0 0 0 0 0 0 0 0 0 0 25044 4528 22844 210923 168446 168446 1 IQNDAGVR Unmodified 871.45118 0.45117911 3690;3737;3873 Q92945;Q96AE4;Q96I24 KHSRP;FUBP1;FUBP3 Far upstream element-binding protein 2;Far upstream element-binding protein 1;Far upstream element-binding protein 3 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 2 1 1 1 1 1 1 1 1 1 1 1 9.0265 9.1398 2 0.004491 7428 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 131.04 64.043 788870000 0 0 0 53282000 38682000 50794000 76927000 44178000 36356000 40509000 127160000 105590000 52003000 49752000 113630000 25045 3690;3737;3873 22845 210924;210925;210926;210927;210928;210929;210930;210931;210932;210933;210934;210935;210936 168447;168448;168449;168450;168451;168452;168453;168454;168455;168456;168457;168458;168459;168460 168455 13 IQNDAGVRIQFK Unmodified 1387.7572 0.75719754 3690;3737;3873 Q92945;Q96AE4;Q96I24 KHSRP;FUBP1;FUBP3 Far upstream element-binding protein 2;Far upstream element-binding protein 1;Far upstream element-binding protein 3 no no 0 0 1 By MS/MS 2.33 0.471 2 1 3 60.899 53.62 2;3 6.4778E-06 72223 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 132.01 100.59 29286000 29286000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25046 3690;3737;3873 22846 210937;210938;210939 168461;168462;168463;168464 168464 3 IQNEQLEK Unmodified 1000.5189 0.51892433 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 15.123 14.944 2 7.7421E-37 14430 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 190.26 28.582 703990000 16960000 0 0 30916000 23066000 29095000 47907000 28290000 35083000 55059000 86416000 77398000 69373000 81022000 123400000 25047 965 22847 210940;210941;210942;210943;210944;210945;210946;210947;210948;210949;210950;210951;210952 168465;168466;168467;168468;168469;168470;168471;168472;168473;168474;168475;168476;168477;168478 168466 12 IQNFLNEFK Unmodified 1151.5975 0.597509 3477 Q8TB03 CXorf38 Uncharacterized protein CXorf38 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.8 3.92 2 3 1 1 1 1 1 80.244 78.891 2 0.0051061 98809 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.46 98.086 157380000 0 124230000 21275000 0 0 0 0 0 0 3702100 3589700 4583100 0 0 0 25048 3477 22848 210953;210954;210955;210956;210957 168479;168480;168481;168482 168480 4 IQNGALNCEEK Unmodified 1274.5925 0.59249998 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS 2 0 1 1 22.764 18.738 2 0.0062765 24831 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.243 53.571 11721000 0 11721000 0 0 0 0 0 0 0 0 0 0 0 0 0 25049 5049 22849 210958 168483 168483 1 IQNGAQGIR Unmodified 955.51993 0.51992738 1309 P31943 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.406 14.568 2 0.003134 13982 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 91.041 33.482 1385000000 0 0 0 67434000 59098000 89218000 76184000 73822000 54339000 157210000 139450000 151150000 144550000 124780000 247760000 25050 1309 22850 210959;210960;210961;210962;210963;210964;210965;210966;210967;210968;210969;210970 168484;168485;168486;168487;168488;168489;168490;168491;168492;168493;168494;168495 168494 12 IQNGTSGIR Unmodified 944.50394 0.50394296 1773 P55795 HNRNPH2 Heterogeneous nuclear ribonucleoprotein H2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 1 2 1 2 1 1 1 2 1 1 2 15.304 15.51 2 0.0031425 12572 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 133.55 57.694 1979300000 0 0 0 15068000 14702000 383890000 24343000 508630000 12503000 31466000 24600000 672990000 27473000 26942000 236730000 25051 1773 22851 210971;210972;210973;210974;210975;210976;210977;210978;210979;210980;210981;210982;210983;210984;210985;210986 168496;168497;168498;168499;168500;168501;168502;168503;168504;168505;168506;168507;168508 168499 13 IQNLEALLQK Unmodified 1168.6816 0.68157298 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 79.022 77.761 2 4.0179E-05 98961 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 159.58 57.863 295960000 28991000 168060000 10236000 3155100 0 0 3986100 5751400 3277500 5500500 9623900 13485000 5750100 10417000 27728000 25052 2495 22852 210987;210988;210989;210990;210991;210992;210993;210994;210995;210996;210997;210998;210999;211000 168509;168510;168511;168512;168513;168514;168515;168516;168517;168518;168519;168520 168514 11 IQNPQILK Unmodified 952.57057 0.57056597 1638 P50851 LRBA Lipopolysaccharide-responsive and beige-like anchor protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 42.349 41.756 2 0.012531 45209 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.423 46.205 210920000 0 91866000 0 5719700 5390900 11219000 7847800 7960800 5502000 15155000 11254000 15947000 9652600 10151000 13259000 25053 1638 22853 211001;211002;211003;211004;211005;211006;211007;211008;211009;211010;211011;211012;211013;211014 168521;168522;168523;168524;168525;168526;168527;168528 168525 8 IQNSSGTDYPDIHAAAK Unmodified 1786.8486 0.84859132 1636 P50748 KNTC1 Kinetochore-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 39.147 39.492 3 0.016304 43682 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 29.81 24.755 85633000 0 0 0 0 0 0 6175000 7664200 6003600 10344000 9729500 11028000 6564200 9634500 18489000 25054 1636 22854 211015;211016;211017;211018;211019;211020;211021;211022;211023 168529 168529 1 IQNTGDYYDLYGGEK Unmodified 1734.7737 0.77369504 2122 Q06124 PTPN11 Tyrosine-protein phosphatase non-receptor type 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 62.572 61.897 2 9.9381E-21 71052 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 117.23 111.26 189400000 0 106360000 0 4715100 4776600 5281400 7663300 4383600 5250500 8049700 8615800 9413400 5802400 7272300 11813000 25055 2122 22855 211024;211025;211026;211027;211028;211029;211030;211031;211032;211033;211034;211035;211036;211037 168530;168531;168532;168533;168534;168535;168536;168537;168538;168539;168540;168541;168542;168543;168544;168545 168531 16 IQNVGQK Unmodified 785.43955 0.43955179 3105 Q7Z589 EMSY Protein EMSY yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 13.101 13.165 2 0.038665 12519 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 69.39 24.417 93461000 0 0 0 9120900 6590700 13171000 12069000 9426200 6026000 13587000 0 0 13516000 9954400 0 25056 3105 22856 211038;211039;211040;211041;211042;211043;211044;211045;211046 168546;168547 168546 2 IQNVNVK Unmodified 813.47085 0.47085192 3601 Q8WYP5 AHCTF1 Protein ELYS yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.753 16.932 2 0.040879 16767 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 68.398 30.753 40368000 0 0 0 2213200 2325800 2511000 3118700 2176600 2286700 2725400 6014800 4900700 4350900 3803300 3941100 25057 3601 22857 211047;211048;211049;211050;211051;211052;211053;211054;211055;211056;211057;211058 168548;168549;168550;168551;168552 168549 5 IQNWHEEHR Unmodified 1247.5796 0.57956752 1345 P35241 RDX Radixin yes yes 0 0 0 By MS/MS 10 0 1 1 11.537 11.921 2 0.040749 10190 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.346 30.646 2046300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2046300 25058 1345 22858 211059 168553 168553 1 IQPAFGADHDVPK Unmodified 1393.699 0.69901396 2097 Q03468 ERCC6 DNA excision repair protein ERCC-6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 1 1 1 1 2 1 2 44.675 44.9 2;3 0.0044534 49643 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 46.387 34.005 432450000 0 0 0 31902000 29218000 35726000 27001000 29112000 28921000 39773000 38973000 35243000 55668000 33720000 47189000 25059 2097 22859 211060;211061;211062;211063;211064;211065;211066;211067;211068;211069;211070;211071;211072;211073 168554;168555;168556;168557;168558;168559;168560 168559 7 IQPALQEK Unmodified 925.52328 0.52328142 4013 Q99471 PFDN5 Prefoldin subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.87 3 5 1 1 1 1 1 1 1 1 26.297 24.834 2 0.0062529 31480 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.88 73.969 1612900000 65281000 1379500000 8593800 0 11376000 0 0 0 8495100 0 25556000 0 0 35995000 78165000 25060 4013 22860 211074;211075;211076;211077;211078;211079;211080;211081 168561;168562;168563;168564 168561 3 IQPAPPEEYVPMVK Unmodified 1596.8222 0.82216556 2114 Q05397 PTK2 Focal adhesion kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 76.48 76.171 2 0.00073609 93689 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.63 100.67 337310000 0 258900000 0 1746300 2779300 5906000 3438200 6083000 4662400 9015900 5861700 7816300 5075800 7818700 18212000 25061 2114 22861 211082;211083;211084;211085;211086;211087;211088;211089;211090;211091;211092;211093;211094 168565;168566;168567;168568;168569;168570;168571;168572;168573;168574;168575;168576 168568 12 IQPAPPEEYVPMVK Oxidation (M) 1612.8171 0.81708018 2114 Q05397 PTK2 Focal adhesion kinase 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.86 3.4 1 1 5 2 1 1 1 1 1 71.198 69.928 2 0.0013833 79998 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.927 34.491 78132000 0 57071000 0 0 2409400 3357600 0 0 0 5626300 0 0 4248600 0 5418700 25062 2114 22861 211095;211096;211097;211098;211099;211100;211101 168577;168578;168579 168577 3417 3 IQPDYPAER Unmodified 1087.5298 0.52982336 4325 Q9H0E3 SAP130 Histone deacetylase complex subunit SAP130 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 31.677 31.823 2 0.016214 33613 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.729 20.849 46750000 0 0 0 0 10925000 0 0 9602700 8011600 0 0 0 0 0 18211000 25063 4325 22862 211102;211103;211104;211105 168580 168580 1 IQPEEKPVEVSPAVTK Unmodified 1749.9513 0.95126548 3301 Q8N0X7 SPG20 Spartin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 44.925 45.097 2;3 8.0247E-05 51305 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 74.338 57.259 1781100000 0 0 0 107690000 145330000 66139000 174960000 170620000 78106000 152260000 180000000 191030000 212150000 166760000 136040000 25064 3301 22863 211106;211107;211108;211109;211110;211111;211112;211113;211114;211115;211116;211117;211118;211119;211120;211121;211122;211123;211124;211125;211126;211127;211128;211129 168581;168582;168583;168584;168585;168586;168587;168588;168589;168590;168591;168592;168593;168594;168595 168594 14 IQPEILELIK Unmodified 1194.7224 0.72237516 3895 Q96JJ3 ELMO2 Engulfment and cell motility protein 2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 90.181 89.709 2 0.039301 112799 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.224 56.761 126530000 0 77903000 11757000 0 1485300 3102900 1507500 2505400 2674800 5402600 4112400 3295900 2158300 2847400 7779800 25065 3895 22864 211130;211131;211132;211133;211134;211135;211136;211137;211138;211139;211140;211141;211142 168596;168597 168597 2 IQPGNPNYTLSLK Unmodified 1443.7722 0.7721789 1937 P63010 AP2B1 AP-2 complex subunit beta yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.483 64.571 2 0.0011087 73072 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 64.82 26.734 86597000 0 0 0 4709900 5832800 6208100 5114500 6746700 2751800 8635200 9084900 10197000 6754400 6329500 14232000 25066 1937 22865 211143;211144;211145;211146;211147;211148;211149;211150;211151;211152;211153;211154 168598;168599;168600;168601;168602;168603;168604;168605;168606;168607;168608 168606 11 IQPGSQQADFLDALIVSMDVIQHETIGK Unmodified 3052.5539 0.55393621 974 P13010 XRCC5 X-ray repair cross-complementing protein 5 yes yes 0 0 0 By MS/MS By MS/MS 1.5 0.5 1 1 1 1 107.52 107.78 3 2.9175E-34 95748 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 97.063 87.18 54134000 44376000 9757500 0 0 0 0 0 0 0 0 0 0 0 0 0 25067 974 22866 211155;211156 168609;168610 168610 2 IQPGSQQADFLDALIVSMDVIQHETIGK Oxidation (M) 3068.5489 0.54885083 974 P13010 XRCC5 X-ray repair cross-complementing protein 5 yes yes 0 1 0 By MS/MS 3 0 1 1 99.716 96.307 3 1.3145E-06 115569 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 44.264 37.541 5860200 0 5860200 0 0 0 0 0 0 0 0 0 0 0 0 0 25068 974 22866 211157 168611 168611 1297 1 IQPLEPDSPTGLSENPTPATEK Unmodified 2320.1434 0.14343594 4997 Q9ULJ3 ZBTB21 Zinc finger and BTB domain-containing protein 21 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 68.275 68.352 2;3 8.4534E-16 78418 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 79.346 74.455 212710000 0 0 0 15196000 15329000 16981000 15177000 12783000 13381000 19561000 20727000 26698000 21334000 16807000 18738000 25069 4997 22867 211158;211159;211160;211161;211162;211163;211164;211165;211166;211167;211168;211169;211170;211171;211172;211173;211174;211175;211176;211177;211178;211179;211180;211181 168612;168613;168614;168615;168616;168617;168618;168619;168620;168621;168622;168623;168624;168625;168626;168627 168624 16 IQPPIAQLPIK Unmodified 1216.7543 0.75434399 3436 Q8NEZ4 KMT2C Histone-lysine N-methyltransferase 2C yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.215 80.258 2 0.006908 92902 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.37 44.148 31749000 0 0 0 1571200 1598500 2272700 1986500 2359300 2083000 4157900 4003500 4504200 2877900 4334500 0 25070 3436 22868 211182;211183;211184;211185;211186;211187;211188;211189;211190;211191;211192;211193 168628;168629;168630;168631;168632;168633 168633 6 IQPQMDMVEK 2 Oxidation (M) 1249.5683 0.56825906 4481 Q9HA64 FN3KRP Ketosamine-3-kinase yes yes 0 2 0 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 19.101 19.414 2 0.0074987 19417 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 45.68 21.725 6408100 0 0 0 0 0 777300 0 0 0 1092400 1919100 2619300 0 0 0 25071 4481 22869 211194;211195;211196;211197 168634 168634 5914;5915 1 IQQAIENVDFSTAK Unmodified 1562.794 0.79403655 1636 P50748 KNTC1 Kinetochore-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 61.94 61.605 2 1.1361E-07 69530 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 112.13 83.399 212070000 0 153990000 0 0 2519700 6557400 2812100 4861500 2998100 6218800 5645800 5476000 4701500 5259600 11029000 25072 1636 22870 211198;211199;211200;211201;211202;211203;211204;211205;211206;211207;211208;211209 168635;168636;168637;168638;168639;168640;168641;168642;168643;168644;168645;168646 168643 12 IQQDADSVITVGR Unmodified 1400.726 0.72595699 4382 Q9H3P7 ACBD3 Golgi resident protein GCP60 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 2 1 1 51.026 51.213 2 0.00069122 56728 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.626 50.498 112420000 0 0 0 9951100 0 21393000 8625500 12350000 0 0 0 22313000 0 14256000 23529000 25073 4382 22871 211210;211211;211212;211213;211214;211215;211216;211217;211218;211219;211220 168647;168648;168649;168650;168651;168652;168653;168654;168655;168656;168657 168650 10 IQQDADSVITVGRGEVVTVR Unmodified 2141.144 0.14404506 4382 Q9H3P7 ACBD3 Golgi resident protein GCP60 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.656 70.728 3 3.5997E-11 80684 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.238 48.362 84953000 0 0 0 1728100 2763400 9380300 3296700 3438300 4989200 9137900 11245000 11803000 4515600 4161900 18493000 25074 4382 22872 211221;211222;211223;211224;211225;211226;211227;211228;211229;211230;211231;211232 168658;168659;168660;168661;168662;168663;168664;168665;168666;168667;168668;168669;168670 168661 13 IQQEIAVQNPLVSER Unmodified 1722.9264 0.92644771 3840 Q96FW1 OTUB1 Ubiquitin thioesterase OTUB1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 73.382 73.423 2 4.3698E-14 83972 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 120.87 79.589 73725000 0 0 0 4459700 0 20748000 0 0 0 0 13127000 0 0 12341000 23050000 25075 3840 22873 211233;211234;211235;211236;211237 168671;168672;168673;168674;168675 168672 5 IQQELQTAK Unmodified 1057.5768 0.57677356 4241 Q9BY43 CHMP4A Charged multivesicular body protein 4a yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 5.2 3.92 3 2 1 1 1 1 1 20.741 18.661 2 8.4969E-09 23738 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 186.3 91.893 260050000 12461000 132190000 2570400 0 0 0 0 0 0 0 0 55474000 0 0 57347000 25076 4241 22874 211238;211239;211240;211241;211242 168676;168677;168678;168679 168676 2 IQQGALELLR Unmodified 1139.6663 0.66625727 3643 Q92621 NUP205 Nuclear pore complex protein Nup205 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 72.619 72.679 2 0.00099736 83582 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 110.87 66.522 61384000 0 0 0 3632300 3514800 5113100 3976900 4283700 0 6900100 4362000 7954200 4923800 6731200 9992300 25077 3643 22875 211243;211244;211245;211246;211247;211248;211249;211250;211251;211252;211253 168680;168681;168682;168683;168684;168685;168686;168687;168688;168689 168684 10 IQQIHVVSQFK Unmodified 1325.7456 0.74557022 3891 Q96JC1 VPS39 Vam6/Vps39-like protein yes yes 0 0 0 By MS/MS 2 0 1 1 64.405 56.126 3 0.035538 75551 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 29.544 19.539 13072000 13072000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25078 3891 22876 211254 168690 168690 1 IQQIIEGK Unmodified 927.53893 0.53893149 394 O60313 OPA1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching 10 0 5 1 1 1 1 1 31.165 31.33 2 0.018283 34063 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 64.567 13.935 12855000 0 0 0 0 1730900 0 2968800 0 0 2858100 0 0 2204700 0 3092600 25079 394 22877 211255;211256;211257;211258;211259 168691;168692 168691 2 IQQILTSTGFSDK Unmodified 1436.7511 0.75110911 5040 Q9UNQ2 DIMT1 Probable dimethyladenosine transferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 65.894 65.14 2 1.0533E-17 82601 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 149.33 99.519 53849000 0 37022000 0 2058100 1419200 2817000 0 1966500 0 2770200 0 0 2607400 0 3189200 25080 5040 22878 211260;211261;211262;211263;211264;211265;211266;211267;211268;211269 168693;168694;168695;168696;168697;168698;168699;168700;168701 168697 9 IQQLAISGLK Unmodified 1069.6495 0.64954457 5117;1724 P53677;Q9Y2T2 AP3M2;AP3M1 AP-3 complex subunit mu-2;AP-3 complex subunit mu-1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66.132 65.022 2 1.4651E-09 73603 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 140.14 27.968 677760000 112250000 183380000 2711900 22824000 20058000 29199000 31347000 29815000 24859000 35423000 33038000 38292000 28308000 39178000 47083000 25081 1724;5117 22879 211270;211271;211272;211273;211274;211275;211276;211277;211278;211279;211280;211281;211282;211283;211284 168702;168703;168704;168705;168706;168707;168708;168709;168710;168711;168712;168713;168714;168715 168706 9 IQQLLNTLK Unmodified 1069.6495 0.64954457 4808;2435 Q9P265;Q14689 DIP2B;DIP2A Disco-interacting protein 2 homolog B;Disco-interacting protein 2 homolog A no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 62.663 62.881 2 0.017188 70898 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.898 11.919 35899000 0 0 0 0 0 7082200 4039200 2999700 2353900 5485700 5655400 0 0 0 8282700 25082 4808;2435 22880 211285;211286;211287;211288;211289;211290;211291 168716;168717;168718 168717 3 IQQLNSNFSQLLEEK Unmodified 1789.921 0.92102798 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 82.422 82.554 2 0.0025523 95311 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.749 47.719 13816000 0 0 0 0 0 2806200 2455900 0 0 0 0 0 0 0 8553600 25083 2446 22881 211292;211293;211294 168719 168719 1 IQQLTALGAAQATAK Unmodified 1483.8358 0.83584179 4013 Q99471 PFDN5 Prefoldin subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 62.45 60.909 2;3 2.9969E-31 80174 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 132.69 94.385 816440000 77670000 551820000 6016800 5589500 6423200 9318800 9697000 9465600 5763100 13605000 24556000 18867000 9407400 18495000 49746000 25084 4013 22882 211295;211296;211297;211298;211299;211300;211301;211302;211303;211304;211305;211306;211307;211308;211309;211310;211311 168720;168721;168722;168723;168724;168725;168726;168727;168728;168729;168730;168731;168732;168733;168734;168735;168736;168737 168729 15 IQQLTEEIGR Unmodified 1185.6354 0.63535107 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 48.97 49.413 2 0.01138 54825 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.962 28.802 20384000 0 0 0 0 0 0 0 0 0 7137300 0 0 0 0 13246000 25085 965 22883 211312;211313 168738;168739 168739 2 IQQMLPDK Unmodified 971.511 0.51100218 4971;4820 Q9P2K3;Q8IZ40;Q9UKL0 RCOR3;RCOR2;RCOR1 REST corepressor 3;REST corepressor 2;REST corepressor 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.588 36.77 2 0.004549 39392 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 130.22 55.806 310730000 0 0 0 15297000 16131000 23302000 17364000 22988000 12370000 27936000 25812000 36088000 29009000 27336000 57094000 25086 4820;4971 22884 211314;211315;211316;211317;211318;211319;211320;211321;211322;211323;211324;211325 168740;168741;168742;168743;168744;168745;168746;168747;168748;168749;168750;168751 168747 11 IQQMLPDK Oxidation (M) 987.50592 0.5059168 4971;4820 Q9P2K3;Q8IZ40;Q9UKL0 RCOR3;RCOR2;RCOR1 REST corepressor 3;REST corepressor 2;REST corepressor 1 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.503 23.707 2 0.0058069 24921 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 84.916 38.964 167420000 0 0 0 11310000 11172000 12439000 11057000 13098000 8523200 17167000 11592000 17142000 18621000 13561000 21738000 25087 4820;4971 22884 211326;211327;211328;211329;211330;211331;211332;211333;211334;211335;211336;211337 168752;168753;168754;168755;168756;168757;168758 168756 6196 4 IQQNQSIR Unmodified 985.53049 0.53049207 455 O75116 ROCK2 Rho-associated protein kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.288 11.402 2 0.012186 9297 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.213 8.1779 47114000 0 0 0 2333900 2050800 5763800 3594300 3196400 2727900 4309300 0 4691700 4896200 5466900 8082300 25088 455 22885 211338;211339;211340;211341;211342;211343;211344;211345;211346;211347;211348 168759;168760;168761 168760 3 IQQNTFTR Unmodified 1006.5196 0.51959303 1124;487 P21333;O75369 FLNA;FLNB Filamin-A;Filamin-B no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.409 22.613 2 0.0043226 23766 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 131.06 49.428 642000000 0 0 0 20653000 19409000 37929000 28485000 18899000 21995000 46582000 94801000 101680000 54493000 60457000 136620000 25089 1124;487 22886 211349;211350;211351;211352;211353;211354;211355;211356;211357;211358;211359;211360 168762;168763;168764;168765;168766;168767;168768;168769;168770;168771;168772;168773 168764 9 IQQQFSDLK Unmodified 1105.5768 0.57677356 601 O94906 PRPF6 Pre-mRNA-processing factor 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 41.708 40.65 2 0.00045211 51757 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.75 99.732 324010000 0 142040000 0 16259000 0 0 29958000 23142000 18083000 37267000 0 0 30408000 26848000 0 25090 601 22887 211361;211362;211363;211364;211365;211366;211367;211368;211369;211370 168774;168775;168776;168777;168778;168779;168780;168781;168782;168783;168784;168785 168778 11 IQQQQPPPGEK Unmodified 1248.6463 0.64625011 1210 P26640 VARS Valine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.34 1 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 18.827 18.806 2 3.7182E-09 92839 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 134.51 65.884 171540000 58295000 19152000 0 3591200 3377700 12406000 5962500 4579200 4889100 10423000 7612100 11408000 7010300 7140100 15698000 25091 1210 22888 211371;211372;211373;211374;211375;211376;211377;211378;211379;211380;211381;211382;211383;211384;211385 168786;168787;168788;168789;168790;168791;168792;168793;168794;168795;168796;168797;168798 168790 12 IQQQRLLDIAK Unmodified 1324.7827 0.78268401 1347 P35249 RFC4 Replication factor C subunit 4 yes yes 0 0 1 By MS/MS 2 0 1 1 65.057 56.769 3 0.046976 76631 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.286 16.048 52825000 52825000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25092 1347 22889 211386 168799 168799 0 IQQRGQGAPAREPIISSEEQK Unmodified 2321.2088 0.20877058 1790 P57076 C21orf59 UPF0769 protein C21orf59 yes yes 0 0 2 By MS/MS 2 0 2 2 40.312 33.689 3;4 2.7886E-24 46602 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.269 66.676 67967000 67967000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25093 1790 22890 211387;211388 168800;168801 168800 1 IQRPPEDSIQPYEK Unmodified 1698.8577 0.85769944 2638 Q16851 UGP2 UTP--glucose-1-phosphate uridylyltransferase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.39 3.7 5 1 12 1 3 2 1 1 1 1 1 1 1 1 1 1 1 1 44.98 43.328 2;3 2.8561E-44 56286 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 153.09 122.13 1126800000 53550000 368290000 271710000 15716000 11426000 34952000 24414000 16518000 18987000 40966000 65647000 51308000 29217000 37654000 86431000 25094 2638 22891 211389;211390;211391;211392;211393;211394;211395;211396;211397;211398;211399;211400;211401;211402;211403;211404;211405;211406 168802;168803;168804;168805;168806;168807;168808;168809;168810;168811;168812;168813;168814;168815;168816;168817;168818;168819;168820;168821;168822;168823;168824;168825;168826;168827;168828;168829;168830;168831 168807 28 IQSALADIAQSQLK Unmodified 1484.8199 0.81985737 2304 Q13503 MED21 Mediator of RNA polymerase II transcription subunit 21 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.751 76.81 2 5.1612E-17 89018 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 123.84 90.574 121220000 0 0 0 3163200 6569200 5284400 10705000 8999400 4807100 11893000 16319000 15228000 10644000 7515500 20095000 25095 2304 22892 211407;211408;211409;211410;211411;211412;211413;211414;211415;211416;211417;211418 168832;168833;168834;168835;168836;168837;168838;168839;168840;168841;168842;168843 168840 12 IQSATVLLNEDVSDEK Unmodified 1759.884 0.88397377 3437 Q8NEZ5 FBXO22 F-box only protein 22 yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 69.54 69.506 2 0.00020878 79926 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 71.241 46.897 32525000 0 0 0 1962700 1820300 4963300 0 2672600 0 4691600 6296900 0 4594200 5523900 0 25096 3437 22893 211419;211420;211421;211422;211423;211424;211425;211426 168844;168845;168846 168844 2 IQSDWAQALRK Unmodified 1314.7044 0.70443369 4111 Q9BRP4 PAAF1 Proteasomal ATPase-associated factor 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 55.07 55.482 3 0.049787 61879 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 25.474 11.216 14469000 0 0 0 0 0 0 0 0 0 0 4421400 0 0 2247200 7800700 25097 4111 22894 211427;211428;211429 168847 168847 1 IQSETNQCSLISNGPSLELGENGASGK Unmodified 2789.3138 0.31376552 2852 Q68CP9 ARID2 AT-rich interactive domain-containing protein 2 yes yes 0 0 0 By MS/MS 3 0 1 1 78.631 75.26 3 1.0133E-08 90312 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 46.307 44.208 6052400 0 6052400 0 0 0 0 0 0 0 0 0 0 0 0 0 25098 2852 22895 211430 168848 168848 1 IQSFDAETQQLLK Unmodified 1519.7882 0.7882229 39 A9UHW6 MIF4GD MIF4G domain-containing protein yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 78.852 74.775 2 0.018696 93078 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.107 55.296 246270000 0 246270000 0 0 0 0 0 0 0 0 0 0 0 0 0 25099 39 22896 211431;211432 168849 168849 1 IQSFLGGAPTEDLK Unmodified 1474.7668 0.76675917 2285 Q13421 MSLN Mesothelin;Megakaryocyte-potentiating factor;Mesothelin, cleaved form yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.078 75.137 2 1.7461E-100 86139 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 201.46 171.2 659670000 0 0 0 26840000 36095000 42093000 45540000 47488000 35196000 68319000 75334000 97466000 47790000 53374000 84135000 25100 2285 22897 211433;211434;211435;211436;211437;211438;211439;211440;211441;211442;211443;211444 168850;168851;168852;168853;168854;168855;168856;168857;168858;168859;168860;168861 168853 12 IQSGLGALSR Unmodified 1000.5665 0.56654322 3715 Q969G5 PRKCDBP Protein kinase C delta-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 2 1 2 45.436 45.613 2 0.0078115 51062 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 61.56 3.7486 136280000 0 0 0 7737500 8070700 9023500 10677000 9100600 7376500 11615000 13109000 29020000 13918000 16628000 0 25101 3715 22898 211445;211446;211447;211448;211449;211450;211451;211452;211453;211454;211455;211456;211457 168862;168863;168864;168865;168866;168867;168868 168865 6 IQSIAPSLQVITSK Unmodified 1483.861 0.86099391 1454 P42345 MTOR Serine/threonine-protein kinase mTOR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.841 78.898 2 1.1579E-05 91550 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 89.403 68.533 112330000 0 0 0 4514300 6351500 7445600 8792300 10268000 8349900 10316000 6752800 18997000 7854800 9947500 12745000 25102 1454 22899 211458;211459;211460;211461;211462;211463;211464;211465;211466;211467;211468;211469 168869;168870;168871;168872;168873;168874;168875;168876;168877;168878;168879;168880 168879 12 IQSIPENSVNVAIDHLSK Unmodified 1963.0375 0.037454724 4077 Q99996 AKAP9 A-kinase anchor protein 9 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 77.683 76.92 3 0.0012607 93696 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 46.663 30.779 97217000 0 63331000 7610200 0 1536800 4899200 0 2842000 2842400 7501300 3977400 0 2676100 0 0 25103 4077 22900 211470;211471;211472;211473;211474;211475;211476;211477;211478 168881;168882;168883 168883 3 IQSLGDSK Unmodified 846.4447 0.44469675 1578 P49588 AARS Alanine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 14.385 13.517 2 0.0096273 13102 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 82.279 17.016 2313600000 105970000 2007500000 23503000 5454900 4353700 11192000 6995900 5914200 4266900 13748000 28973000 19550000 10166000 14820000 51145000 25104 1578 22901 211479;211480;211481;211482;211483;211484;211485;211486;211487;211488;211489;211490;211491;211492;211493;211494;211495 168884;168885;168886;168887;168888;168889;168890;168891;168892;168893 168893 7 IQSQFTDAQK Unmodified 1164.5775 0.57750184 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26.376 25.836 2 8.7253E-12 27958 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 163.32 106.27 751310000 8168600 128490000 0 111190000 36796000 35617000 39682000 119250000 30288000 30823000 47174000 59193000 42537000 29892000 32200000 25105 1029 22902 211496;211497;211498;211499;211500;211501;211502;211503;211504;211505;211506;211507;211508;211509 168894;168895;168896;168897;168898;168899;168900;168901;168902;168903;168904;168905;168906;168907;168908;168909;168910;168911;168912;168913;168914;168915 168894 22 IQSSESFPK Unmodified 1021.508 0.50802529 566 O75962 TRIO Triple functional domain protein yes yes 0 0 0 By MS/MS 10 0 1 1 29.53 29.665 2 0.041744 31990 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 61.582 10.616 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25106 566 22903 211510 168916 168916 1 IQSSGGPLQITMK Unmodified 1358.7228 0.72278587 4483 Q9HAB8 PPCS Phosphopantothenate--cysteine ligase yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 71.54 64.513 2 0.010248 85219 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 59.198 44.048 81130000 30294000 50836000 0 0 0 0 0 0 0 0 0 0 0 0 0 25107 4483 22904 211511;211512 168917;168918 168918 2 IQSSLSSASPSK Unmodified 1190.6143 0.61428128 2835 Q5W0B1 RNF219 RING finger protein 219 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 23.474 23.31 2 2.9019E-08 24368 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 131.82 69.819 92016000 0 25081000 0 3746000 0 4938400 5855800 6384800 3719700 6369700 8252500 9348000 6390700 0 11930000 25108 2835 22905 211513;211514;211515;211516;211517;211518;211519;211520;211521;211522;211523 168919;168920;168921;168922;168923;168924;168925;168926 168925 8 IQSTPVK Unmodified 771.44905 0.44905385 1911 P62820 RAB1A Ras-related protein Rab-1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.12 2.32 1 7 1 1 1 1 1 1 1 1 12.639 12.358 2 0.02403 11360 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 100.19 11.454 592890000 0 31062000 0 36066000 0 68873000 0 80814000 66689000 0 79290000 149750000 0 80338000 0 25109 1911 22906 211524;211525;211526;211527;211528;211529;211530;211531 168927;168928;168929;168930;168931;168932;168933;168934 168930 5 IQSTVTQPGGK Unmodified 1114.5982 0.59823728 1968 P69849;Q15155;Q5JPE7 NOMO3;NOMO1;NOMO2 Nodal modulator 3;Nodal modulator 1;Nodal modulator 2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 17.87 18.025 2 0.010554 17514 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 49.418 25.99 29846000 0 0 0 2429800 2482900 2318700 2019100 3233700 1716900 2855500 2707500 4447700 2792900 2841100 0 25110 1968 22907 211532;211533;211534;211535;211536;211537;211538;211539;211540;211541;211542;211543 168935;168936;168937;168938;168939;168940;168941 168939 7 IQSYSPQAFK Unmodified 1167.5924 0.59242362 700 O95835 LATS1 Serine/threonine-protein kinase LATS1 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 46.763 47.026 2 0.0095732 52884 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 68.224 35.383 40644000 0 0 0 0 2966900 0 3758900 0 3619900 4455500 5680800 4296400 5404600 4592900 5868200 25111 700 22908 211544;211545;211546;211547;211548;211549;211550;211551;211552 168942 168942 1 IQTDSVVATLK Unmodified 1173.6605 0.66050319 865 P08397 HMBS Porphobilinogen deaminase yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 57.645 56.974 2 0.00046543 72872 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.06 26.849 235320000 0 130640000 0 5572400 0 12661000 6369900 6075800 4534700 9585100 9833600 13828000 7113400 8373600 20733000 25112 865 22909 211553;211554;211555;211556;211557;211558;211559;211560;211561;211562;211563;211564;211565 168943;168944;168945;168946;168947;168948;168949;168950 168944 6 IQTEIIEQEDLIK Unmodified 1570.8454 0.84540342 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 76.93 76.593 2 0.00062129 88564 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 94.465 68.423 148430000 0 81742000 0 0 3357900 5464300 4354000 0 6171600 7791300 8993500 6619800 5295800 5940800 12696000 25113 2446 22910 211566;211567;211568;211569;211570;211571;211572;211573;211574;211575;211576 168951;168952;168953;168954;168955;168956;168957;168958;168959 168955 9 IQTLPNMR Unmodified 971.52224 0.52223557 2333 Q13625 TP53BP2 Apoptosis-stimulating of p53 protein 2 yes yes 0 0 0 By MS/MS 10 0 1 1 46.897 46.378 2 0.020609 52547 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 62.659 19.412 5073400 0 0 0 0 5073400 0 0 0 0 0 0 0 0 0 0 25114 2333 22911 211577 168960 168960 1 IQTLPNQNQSQTQPLLK Unmodified 1950.0534 0.053439139 3255 Q8IX12 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 1 1 2 2 2 2 2 2 2 2 2 61.093 61.21 2;3 6.7751E-37 69706 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 132.79 125.42 1490900000 0 0 0 71785000 39380000 43527000 127380000 162460000 89825000 114420000 168300000 98417000 159150000 155400000 260900000 25115 3255 22912 211578;211579;211580;211581;211582;211583;211584;211585;211586;211587;211588;211589;211590;211591;211592;211593;211594;211595;211596;211597;211598;211599 168961;168962;168963;168964;168965;168966;168967;168968;168969;168970;168971;168972;168973;168974;168975;168976;168977;168978 168968 16 IQTLSAIDTIK Unmodified 1201.6918 0.69180331 2679 Q3ZCW2 LGALSL Galectin-related protein yes yes 0 0 0 By MS/MS 10 0 1 1 70.257 69.779 2 0.024027 80314 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 50.353 32.534 3915500 0 0 0 0 3915500 0 0 0 0 0 0 0 0 0 0 25116 2679 22913 211600 168979 168979 1 IQTLTSSVR Unmodified 1003.5662 0.56620887 1039 P16435 POR NADPH--cytochrome P450 reductase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.735 34.917 2 0.0033124 36993 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.429 65.21 611860000 0 0 0 34508000 36278000 44576000 48880000 45671000 42042000 55326000 73957000 79359000 57083000 39973000 54207000 25117 1039 22914 211601;211602;211603;211604;211605;211606;211607;211608;211609;211610;211611;211612 168980;168981;168982;168983;168984;168985;168986;168987;168988;168989 168982 10 IQTLTSSVRESSFVEK Unmodified 1809.9472 0.94724273 1039 P16435 POR NADPH--cytochrome P450 reductase yes yes 0 0 1 By MS/MS 2 0 1 1 67.948 59.654 3 0.0030079 79711 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.097 31.735 102040000 102040000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25118 1039 22915 211613 168990 168990 1 IQTNNNPFQVPIEEQR Unmodified 1925.9595 0.95953875 2099 Q04206 RELA Transcription factor p65 yes yes 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 75.459 75.49 2 8.6149E-20 86633 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 130.07 100.77 47058000 0 0 0 2301300 2116300 3118200 3372900 3432000 0 4866500 5190800 0 2951300 4982600 14726000 25119 2099 22916 211614;211615;211616;211617;211618;211619;211620;211621;211622;211623 168991;168992;168993;168994;168995;168996 168993 6 IQTQPGYANTLR Unmodified 1360.7099 0.709913 2032 Q00325 SLC25A3 Phosphate carrier protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 42.536 42.628 2 0.00043532 47334 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 79.974 49.41 68271000 0 0 0 7882500 5058200 5088100 5471500 6417800 4036000 5501800 0 12260000 8895000 7660300 0 25120 2032 22917 211624;211625;211626;211627;211628;211629;211630;211631;211632;211633 168997;168998;168999;169000;169001;169002;169003;169004 168997 7 IQTSFYELPTDSHASLR Unmodified 1963.964 0.96395543 5238 Q9Y5L0 TNPO3 Transportin-3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 73.896 74.048 3 0.00022999 84516 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 55.094 38.41 87757000 0 0 0 0 0 20420000 6171500 0 8709900 11096000 10338000 0 6639500 8662000 15721000 25121 5238 22918 211634;211635;211636;211637;211638;211639;211640;211641 169005;169006;169007;169008;169009;169010 169009 6 IQTSLTSASLGSADENSVAQADDSLK Unmodified 2607.2511 0.25114849 1602 P49815 TSC2 Tuberin yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 74.592 74.452 3 4.3172E-06 85959 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 38.874 31.071 12669000 0 0 0 0 5852200 0 0 0 0 6816500 0 0 0 0 0 25122 1602 22919 211642;211643 169011 169011 1 IQTTVTELQK Unmodified 1159.6449 0.64485312 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 40.494 40.802 2 0.0012531 44892 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 108.3 69.05 80265000 0 0 0 0 2910500 0 5627300 0 0 0 11964000 14880000 6960200 13368000 24555000 25123 2495 22920 211644;211645;211646;211647;211648;211649;211650;211651;211652;211653 169012;169013;169014;169015;169016;169017;169018;169019;169020;169021 169019 10 IQTVPASHLQQGTASGSSK Unmodified 1895.9701 0.97010344 2935 Q6P4R8 NFRKB Nuclear factor related to kappa-B-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 32.31 32.499 3 2.9621E-08 34445 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.97 69.154 47583000 0 0 0 3928000 3147300 3354200 2793800 0 2561800 4547000 6200500 7167900 4159700 3879400 5843300 25124 2935 22921 211654;211655;211656;211657;211658;211659;211660;211661;211662;211663;211664 169022;169023;169024;169025;169026;169027;169028;169029;169030;169031 169025 10 IQTYAEYMGRK Unmodified 1358.6653 0.66527099 662 O95453 PARN Poly(A)-specific ribonuclease PARN yes yes 0 0 1 By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 41.911 42.191 3 0.0020876 46106 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.024 32.018 50728000 0 0 0 0 0 3907400 5108600 0 6115600 11208000 7180400 0 5057800 0 12150000 25125 662 22922 211665;211666;211667;211668;211669;211670;211671 169032 169032 1 IQVAGIYK Unmodified 890.52255 0.52255314 4522 Q9HCU9 BRMS1 Breast cancer metastasis-suppressor 1 yes yes 0 0 0 By MS/MS 10 0 1 1 49.153 49.382 2 0.039557 54875 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 50.632 28.672 5142300 0 0 0 0 0 0 0 0 0 0 0 0 0 5142300 0 25126 4522 22923 211672 169033 169033 1 IQVEHGVTGSFK Unmodified 1300.6776 0.67755023 178 O00750 PIK3C2B Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit beta yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 46.811 41.013 3 0.0022936 57011 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.288 61.45 252950000 185660000 0 67297000 0 0 0 0 0 0 0 0 0 0 0 0 25127 178 22924 211673;211674 169034;169035 169034 1 IQVGLGASGK Unmodified 928.53418 0.53418046 2461 Q14999 CUL7 Cullin-7 yes yes 0 0 0 By MS/MS 2 0 1 1 43.538 36.745 2 0.021238 50578 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.806 32.365 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25128 2461 22925 211675 169036 169036 1 IQVHYYEDGNVQLVSHK Unmodified 2028.0065 0.0064889465 1705;1524 P47755;P52907 CAPZA2;CAPZA1 F-actin-capping protein subunit alpha-2;F-actin-capping protein subunit alpha-1 no no 0 0 0 By MS/MS 2 0 3 3 66.397 58.102 3;4 0.0002011 77846 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.428 64.684 33964000 33964000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25129 1524;1705 22926 211676;211677;211678 169037;169038;169039;169040;169041 169039 5 IQVLGSLVSLEMGK Unmodified 1472.8273 0.82725094 1573 P49419 ALDH7A1 Alpha-aminoadipic semialdehyde dehydrogenase yes yes 0 0 0 By MS/MS 2 0 1 1 96.582 91.761 2 0.015011 113749 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 51.013 25.876 11312000 0 11312000 0 0 0 0 0 0 0 0 0 0 0 0 0 25130 1573 22927 211679 169042 169042 1 IQVLGSLVSLEMGK Oxidation (M) 1488.8222 0.82216556 1573 P49419 ALDH7A1 Alpha-aminoadipic semialdehyde dehydrogenase yes yes 0 1 0 By MS/MS 2 0 1 1 92.527 84.397 2 0.010845 109202 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.6 31.573 9673200 9673200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25131 1573 22927 211680 169043 169043 2525 1 IQVLTDK Unmodified 815.47527 0.4752686 630 O95232 LUC7L3 Luc7-like protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.047 32.233 2 0.0245 34781 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 82.671 13.288 452930000 0 0 0 26407000 28015000 31294000 37805000 26299000 33842000 42104000 44888000 58028000 38349000 37567000 48329000 25132 630 22928 211681;211682;211683;211684;211685;211686;211687;211688;211689;211690;211691;211692 169044;169045;169046;169047;169048;169049;169050;169051;169052;169053;169054;169055 169050 10 IQVLVEPDHFK Unmodified 1323.7187 0.71868677 1065 P17931 LGALS3 Galectin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.54 3.64 1 7 3 24 5 3 3 2 2 2 2 2 2 2 2 2 2 2 2 68.111 66.742 2;3 0.00016777 73465 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 77.062 67.058 3426300000 797120000 562540000 1171200000 48475000 22093000 93009000 41311000 71029000 33646000 87674000 85132000 110200000 46095000 81073000 175700000 25133 1065 22929 211693;211694;211695;211696;211697;211698;211699;211700;211701;211702;211703;211704;211705;211706;211707;211708;211709;211710;211711;211712;211713;211714;211715;211716;211717;211718;211719;211720;211721;211722;211723;211724;211725;211726;211727 169056;169057;169058;169059;169060;169061;169062;169063;169064;169065;169066;169067;169068;169069;169070;169071;169072;169073;169074;169075;169076;169077;169078;169079;169080;169081;169082;169083;169084 169078 23 IQVQDLMQQLEK Oxidation (M) 1487.7654 0.76537896 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching 10 0 16 2 2 2 1 1 2 2 1 1 1 1 70.34 70.316 2 0.003628 81971 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 54.066 18.621 65243000 0 0 0 4758700 5089100 10986000 2803600 6815900 6173300 11668000 3672500 4816200 5536400 2922500 0 25134 2291 22930 211728;211729;211730;211731;211732;211733;211734;211735;211736;211737;211738;211739;211740;211741;211742;211743 169085;169086;169087 169085 3749 3 IQVQDLMQQLEK Unmodified 1471.7705 0.77046434 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 86.81 86.123 2 0.0015745 99872 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 66.758 45.012 38016000 0 21322000 0 0 0 0 0 1881000 0 2858800 2538000 0 0 2718500 6697200 25135 2291 22930 211744;211745;211746;211747;211748;211749;211750 169088;169089;169090;169091;169092;169093;169094;169095 169088 8 IQVSSEK Unmodified 789.42323 0.42323303 3308 Q8N163 CCAR2 Cell cycle and apoptosis regulator protein 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 9.6564 9.7538 2 0.026251 8172 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 79.116 26.433 55343000 0 0 0 4807800 4815000 6087200 7759500 6235600 4660700 3896900 0 0 5293400 4669400 7117300 25136 3308 22931 211751;211752;211753;211754;211755;211756;211757;211758;211759;211760 169096;169097 169097 2 IQVTAEPEAPDGPAGPEAR Unmodified 1903.9276 0.92756992 2706 Q53LP3 SOWAHC Ankyrin repeat domain-containing protein SOWAHC yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 16 2 1 1 1 1 1 2 2 1 1 1 2 55.196 55.327 2;3 4.405E-38 62104 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 130.24 114.48 215860000 0 0 0 18457000 9474400 14347000 7422300 13571000 9924300 26721000 30305000 25215000 16340000 15018000 29067000 25137 2706 22932 211761;211762;211763;211764;211765;211766;211767;211768;211769;211770;211771;211772;211773;211774;211775;211776 169098;169099;169100;169101;169102;169103;169104;169105;169106;169107 169101 9 IQVTPPGFQLVFLPFADDK Unmodified 2131.1354 0.13537785 973 P12956 XRCC6 X-ray repair cross-complementing protein 6 yes yes 0 0 0 By MS/MS 2 0 1 1 102.53 97.812 3 0.0018618 120866 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 41.615 36.358 7179600 0 7179600 0 0 0 0 0 0 0 0 0 0 0 0 0 25138 973 22933 211777 169108 169108 1 IQVWHEEHR Unmodified 1232.6051 0.60505399 1198 P26038 MSN Moesin yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 26.067 26.388 3 0.033169 28049 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 52.49 36.86 111650000 0 0 0 2141300 0 0 0 0 0 0 12262000 0 4535000 15893000 76817000 25139 1198 22934 211778;211779;211780;211781;211782 169109;169110 169109 1 IQVYSRHPAENGK Unmodified 1497.7688 0.76882486 1858 P61769 B2M Beta-2-microglobulin;Beta-2-microglobulin form pI 5.3 yes yes 0 0 1 By MS/MS 2 0 1 1 23.341 18.365 3 6.1561E-14 26302 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 99.161 71.497 88505000 88505000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25140 1858 22935 211783 169111;169112 169112 2 IRADIEVACYGYEGIDAVK Unmodified 2141.0463 0.046304851 804 P05198 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 82.297 76.37 3 1.7556E-09 98149 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.236 70.448 53861000 53861000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25141 804 22936 211784;211785 169113;169114 169114 2 IRAQTEGINISEEALNHLGEIGTK Unmodified 2592.3507 0.35074337 5086 Q9Y265 RUVBL1 RuvB-like 1 yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 2 2 2 2 86.945 81.991 4 6.2942E-31 103824 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.94 89.935 68051000 28152000 39899000 0 0 0 0 0 0 0 0 0 0 0 0 0 25142 5086 22937 211786;211787;211788;211789 169115;169116;169117 169115 3 IRASETGSDEAIK Unmodified 1375.6943 0.69432251 1406 P39880 CUX1 Homeobox protein cut-like 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 2 1 1 1 1 1 1 1 1 18.614 18.791 3 0.0011486 19339 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 62.042 52.354 106740000 0 0 0 7912800 5365500 7860500 10089000 6844900 8048000 10105000 6902500 10884000 8440000 6136000 18153000 25143 1406 22938 211790;211791;211792;211793;211794;211795;211796;211797;211798;211799;211800;211801;211802 169118;169119;169120;169121;169122;169123;169124;169125;169126;169127;169128;169129;169130 169121 10 IRAVEEQIEYLQK Unmodified 1617.8726 0.87262123 2816 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.54 3.69 4 9 2 2 1 1 1 1 1 1 1 1 1 63.977 62.211 2;3 1.0565E-06 84413 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.46 82.927 133110000 84933000 0 5215200 2601000 0 3663800 1586800 4508300 4716100 5000400 4431200 0 0 2614000 13838000 25144 2816 22939 211803;211804;211805;211806;211807;211808;211809;211810;211811;211812;211813;211814;211815 169131;169132;169133;169134;169135;169136;169137;169138;169139 169135 5 IRDEMVATEQER Unmodified 1475.7038 0.70384134 1041 P16615 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 27.562 27.766 3 0.002302 29809 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 51.211 36.335 16642000 0 0 0 4004900 0 0 0 5984500 0 0 0 6652100 0 0 0 25145 1041 22940 211816;211817;211818;211819 169140;169141;169142 169141 3 IRDGDFVVLK Unmodified 1160.6554 0.65535823 4936 Q9UJA5 TRMT6 tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 yes yes 0 0 1 By matching By MS/MS By MS/MS 10 0 3 1 1 1 57.249 57.47 3 0.020373 64789 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 34.755 23.436 14914000 0 0 0 0 2010500 0 0 0 0 0 0 5476900 0 0 7427000 25146 4936 22941 211820;211821;211822 169143;169144 169144 2 IRDIDAATEAK Unmodified 1201.6303 0.63026569 3995 Q96SU4 OSBPL9 Oxysterol-binding protein-related protein 9 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.14 3.83 5 9 2 1 2 1 1 1 1 1 1 1 1 1 25.016 23.67 2;3 0.0014263 30475 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 109.72 55.379 248050000 24268000 9809900 56619000 0 0 8412900 13856000 16233000 0 15129000 21483000 21730000 20209000 18638000 21659000 25147 3995 22942 211823;211824;211825;211826;211827;211828;211829;211830;211831;211832;211833;211834;211835;211836 169145;169146;169147;169148 169147 3 IRDIEEAIPR Unmodified 1210.667 0.66698555 2787 Q5T9L3 WLS Protein wntless homolog yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 52.199 52.253 3 0.0073808 59444 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 45.829 28.356 56849000 0 0 0 4837500 5496600 8816600 5524800 4816700 0 5461300 0 0 4974900 5735900 11185000 25148 2787 22943 211837;211838;211839;211840;211841;211842;211843;211844;211845 169149;169150;169151;169152;169153;169154 169149 5 IRDLLDVSK Unmodified 1057.6132 0.61315906 1328 P33176;O60282 KIF5B;KIF5C Kinesin-1 heavy chain;Kinesin heavy chain isoform 5C yes no 0 0 1 By MS/MS 2 0 1 1 61.821 53.565 2 0.0032378 72372 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 123.75 72.403 89722000 89722000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25149 1328 22944 211846 169155 169155 1 IRDLNDEINK Unmodified 1228.6412 0.64116473 5001 Q9ULR0 ISY1 Pre-mRNA-splicing factor ISY1 homolog yes yes 0 0 1 By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 2 1 1 1 1 1 1 1 1 1 1 30.593 30.736 3 0.004629 33164 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 54.259 32.266 169560000 0 0 0 7318500 10787000 13405000 11650000 10449000 6454100 15988000 14699000 20672000 17078000 14481000 26577000 25150 5001 22945 211847;211848;211849;211850;211851;211852;211853;211854;211855;211856;211857;211858;211859 169156;169157;169158;169159;169160;169161;169162 169160 5 IRDLSNQEEQYNR Unmodified 1663.7914 0.79141079 392 O60293 ZFC3H1 Zinc finger C3H1 domain-containing protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 28.125 28.278 3 0.00024904 29529 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.905 68.74 69842000 0 0 0 3225200 6770200 6836600 4978200 0 6206700 7495100 0 8920200 13017000 0 12393000 25151 392 22946 211860;211861;211862;211863;211864;211865;211866;211867;211868 169163;169164;169165;169166;169167;169168;169169;169170;169171 169166 8 IRDQLSAVASK Unmodified 1186.667 0.66698555 4785 Q9P000 COMMD9 COMM domain-containing protein 9 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.781 29.973 3 0.0036169 32817 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 70.089 35.335 216590000 0 0 0 15759000 11284000 15490000 18147000 20801000 10247000 15231000 15245000 23828000 25426000 17304000 27823000 25152 4785 22947 211869;211870;211871;211872;211873;211874;211875;211876;211877;211878;211879;211880 169172;169173;169174;169175;169176;169177;169178;169179;169180;169181;169182 169172 3 IREDEGAVASSTVK Unmodified 1460.7471 0.74708636 4797 Q9P0U4 CXXC1 CXXC-type zinc finger protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 2 1 1 2 2 1 1 1 2 2 25.635 25.828 2;3 7.6165E-15 26141 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 119.39 63.579 281730000 0 0 0 18696000 16908000 20509000 33522000 30311000 0 24962000 20022000 25939000 0 42085000 48778000 25153 4797 22948 211881;211882;211883;211884;211885;211886;211887;211888;211889;211890;211891;211892;211893;211894;211895 169183;169184;169185;169186;169187;169188;169189;169190;169191;169192;169193;169194;169195;169196;169197;169198 169187 16 IREDLPNLESSEETEQINK Unmodified 2243.0917 0.091734718 3961 Q96QK1 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.9 3.81 6 2 12 3 3 2 1 1 1 1 1 1 1 1 1 1 1 1 64.617 62.391 2;3 5.3013E-76 80127 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 177.88 161.74 1004700000 142920000 362660000 185680000 10203000 11870000 21852000 15434000 14845000 11738000 18562000 39071000 33301000 18768000 27047000 90712000 25154 3961 22949 211896;211897;211898;211899;211900;211901;211902;211903;211904;211905;211906;211907;211908;211909;211910;211911;211912;211913;211914;211915 169199;169200;169201;169202;169203;169204;169205;169206;169207;169208;169209;169210;169211;169212;169213;169214;169215;169216;169217;169218;169219;169220;169221;169222 169203 23 IREEFPDR Unmodified 1060.5302 0.53015772 4160 Q9BUF5 TUBB6 Tubulin beta-6 chain no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.269 28.463 2 0.015282 30277 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 131.22 131.22 397280000 0 0 0 18752000 17390000 24627000 19609000 23933000 20018000 32455000 52578000 46626000 46227000 32013000 63046000 25155 4160 22950 211916;211917;211918;211919;211920;211921;211922;211923;211924;211925;211926;211927 169223;169224 169223 0 IREEYPDR Unmodified 1076.5251 0.52507234 1963;842;2350;4182;2678;47 P07437;A6NNZ2;P68371;Q13885;Q9BVA1;Q3ZCM7;CON__ENSEMBL:ENSBTAP00000025008;Q9H4B7 TUBB;TUBB4B;TUBB2A;TUBB2B;TUBB8;TUBB1 Tubulin beta chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-8 chain;Tubulin beta-1 chain no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.939 16.112 2 1.9704E-10 15706 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 164.96 110.43 + 9035000000 0 0 0 324420000 286050000 373170000 459470000 429800000 398080000 612870000 918470000 1213900000 1228700000 1116700000 1673400000 25156 842;1963;2350;4182;2678;47 22951 211928;211929;211930;211931;211932;211933;211934;211935;211936;211937;211938;211939 169225;169226;169227;169228;169229;169230;169231;169232;169233;169234;169235;169236 169226 6 IREEYPDRIMNTFSVVPSPK Oxidation (M) 2393.2049 0.20493076 1963;842 P07437;P68371 TUBB;TUBB4B Tubulin beta chain;Tubulin beta-4B chain no no 0 1 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.5 1.94 2 30 2 2 3 3 3 4 3 2 2 2 2 3 1 72.163 71.964 3;4 3.97E-62 82533 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 137.43 100.05 2961800000 83979000 0 0 38267000 34948000 333890000 66810000 253480000 256950000 300190000 261060000 437660000 148450000 184110000 562020000 25157 842;1963 22952 211940;211941;211942;211943;211944;211945;211946;211947;211948;211949;211950;211951;211952;211953;211954;211955;211956;211957;211958;211959;211960;211961;211962;211963;211964;211965;211966;211967;211968;211969;211970;211971 169237;169238;169239;169240;169241;169242;169243;169244;169245;169246;169247;169248;169249;169250;169251;169252;169253;169254;169255;169256;169257;169258;169259;169260;169261;169262;169263;169264;169265;169266;169267;169268;169269;169270;169271;169272;169273;169274;169275;169276;169277;169278;169279 169273 1038 42 IREEYPDRIMNTFSVVPSPK Unmodified 2377.21 0.21001614 1963;842 P07437;P68371 TUBB;TUBB4B Tubulin beta chain;Tubulin beta-4B chain no no 0 0 2 By MS/MS By MS/MS By matching By matching By matching By MS/MS 7.86 3.4 1 1 5 1 1 1 1 1 2 80.271 78.764 3;4 2.4782E-13 101041 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.358 13.591 277850000 16275000 3418900 0 0 0 2006600 0 2398500 5216300 0 0 0 0 0 248540000 25158 842;1963 22952 211972;211973;211974;211975;211976;211977;211978 169280;169281;169282;169283 169283 4 IREGQVEVLK Unmodified 1169.6768 0.67682195 2911 Q6NZI2 PTRF Polymerase I and transcript release factor yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36.297 35.714 3 0.0038842 38488 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 97.734 72.881 1236500000 224100000 0 68735000 55339000 66776000 78753000 72781000 61675000 58997000 99409000 81541000 101410000 85011000 70701000 111250000 25159 2911 22953 211979;211980;211981;211982;211983;211984;211985;211986;211987;211988;211989;211990;211991;211992 169284;169285;169286;169287;169288;169289;169290;169291;169292;169293;169294;169295;169296;169297 169290 5 IREIADGLCLEVEGK Unmodified 1700.8767 0.87672033 984 P13693 TPT1 Translationally-controlled tumor protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 6 2 4 3 1 78.237 73.12 2;3 1.1993E-29 94016 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 145.1 112.77 714990000 553330000 155500000 6173700 0 0 0 0 0 0 0 0 0 0 0 0 25160 984 22954 211993;211994;211995;211996;211997;211998;211999;212000 169298;169299;169300;169301;169302;169303;169304;169305;169306 169305 7 IRELESQISELQEDLESER Unmodified 2302.1288 0.12884851 1356 P35579 MYH9 Myosin-9 yes yes 0 0 1 By MS/MS 2 0 1 1 90.253 82.122 3 4.3876E-06 106695 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.029 61.366 6957300 6957300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25161 1356 22955 212001 169307 169307 1 IRELESQISELQEDLESERASR Unmodified 2616.2991 0.29910173 1356 P35579 MYH9 Myosin-9 yes yes 0 0 2 By MS/MS 2 0 1 1 88.443 80.312 4 3.4757E-05 104407 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.901 59.14 52719000 52719000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25162 1356 22956 212002 169308;169309 169309 2 IRELGSLPQEAFEK Unmodified 1615.857 0.85697116 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 2 1 1 1 1 1 1 1 1 1 1 1 1 69.073 67.665 2;3 0.00068749 89853 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.26 59.615 822590000 596410000 86352000 0 3965000 0 16552000 7658100 11015000 8901200 14138000 10423000 14784000 11120000 13409000 27857000 25163 5071 22957 212003;212004;212005;212006;212007;212008;212009;212010;212011;212012;212013;212014;212015;212016 169310;169311;169312;169313;169314;169315;169316;169317;169318;169319;169320 169314 10 IRELTAVVQK Unmodified 1155.6976 0.69755739 1156 P23396 RPS3 40S ribosomal protein S3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 2 1 1 1 2 2 1 1 1 1 39.879 40.066 3 0.0035882 44435 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 112.13 66.761 1076800000 0 0 0 60789000 70669000 66101000 54181000 72932000 52955000 98919000 103050000 132100000 104680000 94821000 165570000 25164 1156 22958 212017;212018;212019;212020;212021;212022;212023;212024;212025;212026;212027;212028;212029;212030;212031 169321;169322;169323;169324;169325;169326;169327;169328;169329;169330;169331;169332 169322 3 IREPLTAQQLETTTER Unmodified 1884.9905 0.99050453 2921 Q6P1N0 CC2D1A Coiled-coil and C2 domain-containing protein 1A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 57.41 57.236 3 4.3463E-06 65570 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 79.317 68.273 44500000 0 0 0 7547600 6108600 14353000 8589100 7902000 0 0 0 0 0 0 0 25165 2921 22959 212032;212033;212034;212035;212036 169333;169334;169335;169336;169337;169338 169338 6 IREQEPARR Unmodified 1153.6316 0.63160309 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.0752 6.1926 3 0.042846 3329 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.287 49.058 114460000 0 0 0 6013700 7807500 9269000 9620600 6651000 9666100 7923700 13015000 13667000 10147000 9497000 11179000 25166 1492 22960 212037;212038;212039;212040;212041;212042;212043;212044;212045;212046;212047;212048 169339 169339 1 IREQNLQDIK Unmodified 1255.6884 0.68844927 1361 P35611 ADD1 Alpha-adducin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 31.971 30.822 3 5.1289E-06 39737 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 132.25 99.021 499030000 112850000 29884000 39385000 14025000 18097000 23051000 18136000 0 19573000 27422000 40160000 44010000 41450000 23322000 47655000 25167 1361 22961 212049;212050;212051;212052;212053;212054;212055;212056;212057;212058;212059;212060;212061;212062;212063 169340;169341;169342;169343;169344;169345;169346;169347;169348;169349;169350;169351;169352;169353;169354 169350 10 IREQVLHHPQLGER Unmodified 1710.9278 0.92778512 4814 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 34.012 34.347 4 0.0051257 35948 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 31.914 27.671 55272000 0 0 0 0 0 8814200 0 2609900 7044900 2091000 1742200 10100000 1617900 5952500 15299000 25168 4814 22962 212064;212065;212066;212067;212068;212069;212070;212071;212072 169355;169356;169357;169358 169355 4 IREVAQTADARLTEGK Unmodified 1756.9432 0.94316041 1083 P19174 PLCG1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 yes yes 0 0 2 By MS/MS 2 0 2 2 42.755 36.02 3;4 1.0565E-82 49655 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 214.82 194.54 91890000 91890000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25169 1083 22963 212073;212074 169359;169360 169360 1 IREYEQTLK Unmodified 1178.6295 0.62953741 1406;2357 P39880;Q13948 CUX1 Homeobox protein cut-like 1;Protein CASP no no 0 0 1 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25.881 25.126 3 0.0035056 26805 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 69.276 52.108 367790000 129670000 17459000 25469000 0 14066000 14507000 16351000 17779000 14911000 16621000 15774000 16986000 17555000 23607000 27038000 25170 1406;2357 22964 212075;212076;212077;212078;212079;212080;212081;212082;212083;212084;212085;212086;212087;212088 169361;169362;169363;169364;169365;169366;169367;169368;169369 169361 8 IREYFGEFGEIEAIELPMDPK Unmodified 2482.209 0.20901308 4056 Q99729 HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 97.141 91.324 3 1.4369E-42 115653 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 123.14 109.04 133000000 133000000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25171 4056 22965 212089;212090 169370;169371 169371 1 IREYFGEFGEIEAIELPMDPK Oxidation (M) 2498.2039 0.2039277 4056 Q99729 HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B yes yes 0 1 1 By MS/MS 2 0 1 1 95.414 87.283 3 6.9517E-09 112785 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.039 78.162 74616000 74616000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25172 4056 22965 212091 169372 169372 5554 1 IREYFGGFGEVESIELPMDNK Oxidation (M) 2445.1522 0.15222649 2365 Q14103 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 yes yes 0 1 1 By MS/MS 2 0 1 1 90.92 82.79 3 0.0017031 107346 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.888 35.991 51824000 51824000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25173 2365 22966 212092 169373 169373 3850 1 IREYFGGFGEVESIELPMDNK Unmodified 2429.1573 0.15731186 2365 Q14103 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 yes yes 0 0 1 By MS/MS 2 0 1 1 94.489 86.358 3 3.1051E-38 111709 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 125.45 117.13 61106000 61106000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25174 2365 22966 212093 169374;169375 169375 2 IRFQESEERPK Unmodified 1417.7314 0.73137672 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.65 3.66 1 3 1 12 4 1 1 1 1 1 1 1 1 1 1 1 1 1 29.809 29.042 2;3 1.6236E-08 34910 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 167.11 146.28 1324400000 914680000 19078000 0 5747600 6716000 12099000 7212000 8626500 5422900 12184000 49927000 54962000 11328000 43281000 173160000 25175 1337 22967 212094;212095;212096;212097;212098;212099;212100;212101;212102;212103;212104;212105;212106;212107;212108;212109;212110 169376;169377;169378;169379;169380;169381;169382;169383;169384;169385;169386 169381 7 IRGETLGLIGFGR Unmodified 1387.7936 0.79358304 1786 P56545 CTBP2 C-terminal-binding protein 2 yes yes 0 0 1 By MS/MS 10 0 1 1 76.761 77.048 3 0.042422 88523 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 29.491 22.762 5586500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5586500 25176 1786 22968 212111 169387 169387 1 IRGLVPPNASR Unmodified 1178.6884 0.68838969 1530 P47929 LGALS7 Galectin-7 yes yes 0 0 1 By MS/MS 10 0 1 1 39.125 38.631 3 0.00022793 43252 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 76.927 70.039 59059000 0 0 0 59059000 0 0 0 0 0 0 0 0 0 0 0 25177 1530 22969 212112 169388;169389;169390 169388 3 IRGPEESQPPQLYAADEEEAPGTRDPTR Unmodified 3108.4748 0.47483427 2754 Q5RKV6 EXOSC6 Exosome complex component MTR3 yes yes 0 0 2 By MS/MS By matching By MS/MS 10 0 3 1 1 1 57.012 57.366 4 4.4412E-25 64567 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.074 55.98 27996000 0 0 0 0 0 6474500 0 0 0 0 7938100 0 0 0 13584000 25178 2754 22970 212113;212114;212115 169391;169392 169392 2 IRGTSYQSPHGIPIDLLDR Unmodified 2137.128 0.12800107 5077 Q9Y230 RUVBL2 RuvB-like 2 yes yes 0 0 1 By MS/MS 10 0 1 1 76.896 77.182 4 0.00027404 88545 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.819 43 23485000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23485000 25179 5077 22971 212116 169393 169393 1 IRIDAMHGVVGPYVK Oxidation (M) 1669.8974 0.89739619 1380 P36871 PGM1 Phosphoglucomutase-1 yes yes 0 1 1 By MS/MS By MS/MS 10 0 2 1 1 56.588 57.178 3 0.0006183 64194 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.04 37.874 22691000 0 0 0 0 0 0 0 0 0 0 0 5517700 0 0 17173000 25180 1380 22972 212117;212118 169394 169394 2143 1 IRIDSLSAQLSQLQK Unmodified 1698.9628 0.96283322 757 P02545 LMNA Prelamin-A/C;Lamin-A/C yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 79.461 79.602 3 0.00063431 91614 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.509 56.737 127460000 0 0 0 0 0 7346700 1589200 6620500 5257700 13304000 8434400 11662000 2262900 6568800 64414000 25181 757 22973 212119;212120;212121;212122;212123;212124;212125;212126;212127;212128 169395;169396;169397;169398 169396 4 IRLDETDDPDDYGDR Unmodified 1793.7704 0.77040058 841 P07384 CAPN1 Calpain-1 catalytic subunit yes yes 0 0 1 By MS/MS 10 0 1 1 45.856 46.593 3 0.032549 51391 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 18.156 16.031 6616400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6616400 25182 841 22974 212129 169399 169399 1 IRLDTEEQLK Unmodified 1243.6772 0.67721588 3490 Q8TCS8 PNPT1 Polyribonucleotide nucleotidyltransferase 1, mitochondrial yes yes 0 0 1 By MS/MS 2 0 1 1 46.496 42.645 3 0.0013471 53962 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 100.48 77.899 11732000 0 0 11732000 0 0 0 0 0 0 0 0 0 0 0 0 25183 3490 22975 212130 169400 169400 1 IRLDTETEGVPSTAIR Unmodified 1756.9319 0.93192702 1180 P24941 CDK2 Cyclin-dependent kinase 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 61.76 61.838 2;3 0.00010222 70385 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 52.365 46.705 462740000 0 0 0 18597000 18839000 55765000 24516000 29046000 30702000 54104000 49193000 53728000 34084000 36822000 57343000 25184 1180 22976 212131;212132;212133;212134;212135;212136;212137;212138;212139;212140;212141;212142;212143;212144;212145;212146;212147;212148;212149;212150;212151;212152;212153;212154 169401;169402;169403;169404;169405;169406;169407;169408;169409;169410;169411;169412;169413;169414;169415 169412 15 IRLENEIQTYR Unmodified 1433.7627 0.76267685 72 CON__P13645;P13645 KRT10 Keratin, type I cytoskeletal 10 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.68 1.58 3 71 1 1 1 10 5 6 4 9 6 7 7 5 6 3 3 60.149 60.206 2;3 2.8281E-88 61315 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 232 151.31 + 38547000000 5893800 2788600 2097400 9263700000 1388400000 2242100000 1978400000 2985600000 1579500000 2664700000 3413800000 5123100000 4675200000 1642600000 1579400000 25185 72 22977 212155;212156;212157;212158;212159;212160;212161;212162;212163;212164;212165;212166;212167;212168;212169;212170;212171;212172;212173;212174;212175;212176;212177;212178;212179;212180;212181;212182;212183;212184;212185;212186;212187;212188;212189;212190;212191;212192;212193;212194;212195;212196;212197;212198;212199;212200;212201;212202;212203;212204;212205;212206;212207;212208;212209;212210;212211;212212;212213;212214;212215;212216;212217;212218;212219;212220;212221;212222;212223;212224;212225;212226;212227;212228 169416;169417;169418;169419;169420;169421;169422;169423;169424;169425;169426;169427;169428;169429;169430;169431;169432;169433;169434;169435;169436;169437;169438;169439;169440;169441;169442;169443;169444;169445;169446;169447;169448;169449;169450;169451;169452;169453;169454;169455;169456;169457;169458;169459;169460;169461;169462;169463;169464;169465;169466;169467;169468;169469;169470;169471;169472;169473;169474;169475;169476;169477;169478;169479;169480;169481;169482;169483;169484;169485;169486;169487;169488;169489;169490;169491;169492;169493;169494;169495;169496;169497;169498;169499;169500;169501;169502;169503;169504;169505;169506;169507;169508;169509;169510;169511;169512;169513;169514;169515;169516;169517;169518;169519;169520;169521;169522;169523;169524;169525;169526;169527;169528;169529;169530;169531;169532;169533;169534;169535;169536;169537;169538;169539;169540;169541;169542;169543;169544;169545;169546;169547;169548;169549;169550;169551;169552;169553;169554;169555;169556;169557;169558 169519 137 IRLESEEEGVPSTAIR Unmodified 1784.9268 0.92684164 822 P06493 CDK1 Cyclin-dependent kinase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.04 2.6 3 22 1 1 1 2 2 2 1 1 2 2 2 2 2 2 2 57.395 57.352 2;3 5.329E-20 64462 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.35 99.077 1746400000 486600 243660 8219400 80320000 78058000 207130000 15018000 12814000 118750000 168830000 196220000 244390000 161780000 155520000 298600000 25186 822 22978 212229;212230;212231;212232;212233;212234;212235;212236;212237;212238;212239;212240;212241;212242;212243;212244;212245;212246;212247;212248;212249;212250;212251;212252;212253 169559;169560;169561;169562;169563;169564;169565;169566;169567;169568;169569;169570;169571;169572;169573;169574;169575;169576;169577;169578 169564 18 IRLESEEEGVPSTAIREISLLK Unmodified 2468.3486 0.34861811 822 P06493 CDK1 Cyclin-dependent kinase 1 yes yes 0 0 2 By MS/MS 2 0 1 1 91.48 83.349 4 0.0029038 108194 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 33.348 21.22 14674000 14674000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25187 822 22979 212254 169579 169579 1 IRLISLTDENALSGNEELTVK Unmodified 2314.238 0.23800503 1002 P14625 HSP90B1 Endoplasmin yes yes 0 0 1 By MS/MS By matching 2.67 0.471 1 2 2 1 87.5 82.519 3 9.8557E-09 105246 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.646 67.842 104690000 102970000 1721800 0 0 0 0 0 0 0 0 0 0 0 0 0 25188 1002 22980 212255;212256;212257 169580;169581;169582 169582 3 IRLNYSDESPEAGK Unmodified 1577.7686 0.76855009 4301 Q9GZR1 SENP6 Sentrin-specific protease 6 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 46.922 41.102 3 0.00024947 56847 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.722 60.133 12746000 10345000 0 2400800 0 0 0 0 0 0 0 0 0 0 0 0 25189 4301 22981 212258;212259 169583 169583 1 IRLPYELQK Unmodified 1158.6761 0.67609367 686 O95757 HSPA4L Heat shock 70 kDa protein 4L yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 62.128 62.445 3 0.0047991 70369 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.233 55.174 57429000 0 0 0 0 0 0 2181900 0 1841000 0 7703600 10126000 0 7373400 28203000 25190 686 22982 212260;212261;212262;212263;212264;212265 169584;169585;169586 169584 3 IRMEPDETVK Unmodified 1216.6122 0.61217279 1745 P54725 RAD23A UV excision repair protein RAD23 homolog A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.35 3.88 6 2 9 2 4 2 1 1 1 1 1 1 1 1 1 33.153 31.048 2;3 0.00017989 39442 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 139.43 84.825 1205700000 127050000 531730000 296450000 0 0 6869800 6505000 0 4173700 10638000 35279000 49328000 10495000 33049000 94128000 25191 1745 22983 212266;212267;212268;212269;212270;212271;212272;212273;212274;212275;212276;212277;212278;212279;212280;212281;212282 169587;169588;169589;169590;169591;169592;169593;169594;169595;169596;169597;169598;169599;169600;169601 169598 10 IRMEPDETVK Oxidation (M) 1232.6071 0.60708741 1745 P54725 RAD23A UV excision repair protein RAD23 homolog A yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 6 2 2 4 2 19.233 15.619 2;3 0.00142 19968 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 96.342 79.316 361710000 36434000 151930000 173350000 0 0 0 0 0 0 0 0 0 0 0 0 25192 1745 22983 212283;212284;212285;212286;212287;212288;212289;212290 169602;169603;169604;169605;169606;169607;169608;169609;169610 169609 2835 6 IRMEPWDYPAK Unmodified 1404.686 0.68600643 2002 P82930 MRPS34 28S ribosomal protein S34, mitochondrial yes yes 0 0 1 By MS/MS 10 0 1 1 62.15 62.722 3 0.033821 70988 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 25.98 17.026 5262800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5262800 25193 2002 22984 212291 169611 169611 1 IRNELMQSLNQDSNSNFK Unmodified 2137.0222 0.022215365 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 64.503 64.741 3 1.1027E-32 73144 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.781 79.685 73950000 0 0 0 0 0 5004700 0 8582100 4169500 5065400 5592700 11314000 6194400 7674900 20352000 25194 2556 22985 212292;212293;212294;212295;212296;212297;212298;212299;212300 169612;169613;169614;169615;169616;169617;169618;169619;169620;169621;169622;169623;169624 169616 13 IRNELMQSLNQDSNSNFK Oxidation (M) 2153.0171 0.017129987 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 50.148 50.182 3 1.404E-33 56812 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 123.14 114.09 111870000 0 0 0 4377500 7879300 0 13206000 10142000 16878000 0 0 0 27119000 0 32268000 25195 2556 22985 212301;212302;212303;212304;212305;212306;212307 169625;169626;169627;169628;169629;169630 169627 4197 6 IRNLPWVEK Unmodified 1153.6608 0.66077796 1424 P40937 RFC5 Replication factor C subunit 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 57.694 57.812 3 0.0020507 64678 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.688 62.869 279970000 0 0 0 8856800 7420000 30274000 13061000 14462000 17621000 18636000 24566000 43522000 20836000 20223000 60491000 25196 1424 22986 212308;212309;212310;212311;212312;212313;212314;212315;212316;212317;212318;212319 169631;169632;169633;169634;169635;169636;169637;169638;169639;169640;169641;169642;169643;169644;169645;169646 169634 16 IRNNSAIHIR Unmodified 1192.6789 0.67888764 544 O75817 POP7 Ribonuclease P protein subunit p20 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 19.423 19.697 3 0.022089 20656 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 32.731 19.353 18568000 0 0 0 0 0 2846400 0 0 0 3722100 0 6328300 3435800 2235500 0 25197 544 22987 212320;212321;212322;212323;212324 169647;169648 169647 2 IRNPNAAVTLACK Unmodified 1426.7715 0.77146739 2097 Q03468 ERCC6 DNA excision repair protein ERCC-6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 38.198 38.255 3 0.00094785 43008 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 51.612 43.701 38944000 0 0 0 3733100 3770300 3582000 3025100 5679800 4063400 0 5563600 0 4724900 4802000 0 25198 2097 22988 212325;212326;212327;212328;212329;212330;212331;212332;212333 169649;169650;169651;169652;169653;169654;169655 169654 7 IRPGEYEQFESTIGFK Unmodified 1899.9367 0.93667805 4397 Q9H4G0 EPB41L1 Band 4.1-like protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 83.262 75.131 3 0.0015347 98301 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.814 52.244 7319300 7319300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25199 4397 22989 212334 169656 169656 1 IRPLEVPTTAGPASASTPTDGAK Unmodified 2236.1699 0.16992546 4999 Q9ULL5 PRR12 Proline-rich protein 12 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.768 61.868 3 5.2175E-05 69851 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 44.167 35.672 141370000 0 0 0 8796600 7820500 12090000 11347000 9035000 9411600 16625000 13202000 13801000 11357000 12150000 15730000 25200 4999 22990 212335;212336;212337;212338;212339;212340;212341;212342;212343;212344;212345;212346 169657;169658;169659;169660;169661;169662;169663;169664;169665;169666;169667;169668 169664 12 IRPNPHDTK Unmodified 1076.5727 0.57269123 1238 P28715 ERCC5 DNA repair protein complementing XP-G cells yes yes 0 0 1 By MS/MS 2 0 1 1 7.2824 3.7674 2 0.00029433 7020 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 153.08 80.842 19273000 19273000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25201 1238 22991 212347 169669;169670;169671 169671 3 IRPVIEQTFPFSK Unmodified 1560.8664 0.86641364 3577 Q8WWV3 RTN4IP1 Reticulon-4-interacting protein 1, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 77.189 77.338 3 0.041393 89192 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 29.638 22.598 31046000 0 0 0 0 0 4847600 0 4079900 5814600 0 0 6103800 3551900 0 6648500 25202 3577 22992 212348;212349;212350;212351;212352;212353 169672 169672 1 IRQAEEQIEHLQR Unmodified 1648.8645 0.86451616 463 O75150 RNF40 E3 ubiquitin-protein ligase BRE1B yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 34.613 35.054 3 0.01808 38926 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 35.809 28.607 14832000 0 0 0 0 0 0 0 4620200 0 0 0 0 0 0 10212000 25203 463 22993 212354;212355 169673 169673 1 IRQDSVTK Unmodified 945.52434 0.52434406 2041 Q00613 HSF1 Heat shock factor protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 7.2455 4.3792 2 0.030957 6115 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 145.16 53.529 97785000 27442000 0 70343000 0 0 0 0 0 0 0 0 0 0 0 0 25204 2041 22994 212356;212357 169674 169674 1 IRQEIQELK Unmodified 1155.6612 0.66117189 4360 Q9H270 VPS11 Vacuolar protein sorting-associated protein 11 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching 10 0 15 1 1 1 2 1 1 2 1 1 1 1 2 30.266 30.476 3 0.01114 33106 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 56.434 8.4743 105770000 0 0 0 5006200 5304200 13912000 7564700 8022800 4064500 10245000 11225000 9383000 8285700 7343400 15417000 25205 4360 22995 212358;212359;212360;212361;212362;212363;212364;212365;212366;212367;212368;212369;212370;212371;212372 169675;169676;169677;169678;169679;169680 169677 6 IRQERDEAVK Unmodified 1242.668 0.66804818 6 A0MZ66 KIAA1598 Shootin-1 yes yes 0 0 2 By MS/MS 2 0 1 1 7.9418 4.4267 2 0.00012472 7693 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 135.71 92.842 39396000 39396000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25206 6 22996 212373 169681 169681 1 IRQHEQLRDDGDSQQSLK Unmodified 2152.0621 0.062106345 5365 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 2 1 1 2 1 1 2 2 1 2 2 6.4206 6.5625 4 0.0012374 4726 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 48.314 12.202 + 765220000 0 0 0 29900000 90043000 6536500 28957000 66000000 15269000 31813000 106630000 171430000 55482000 84726000 78436000 25207 5365 22997 212374;212375;212376;212377;212378;212379;212380;212381;212382;212383;212384;212385;212386;212387;212388;212389;212390;212391 169682;169683;169684;169685;169686;169687;169688;169689;169690 169683 7 IRQLGSAALAR Unmodified 1154.6884 0.68838969 3358 Q8N6H7 ARFGAP2 ADP-ribosylation factor GTPase-activating protein 2 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.776 34.956 3 9.9885E-06 37066 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 113.38 87.757 282830000 0 0 0 16560000 11461000 22198000 21347000 16928000 18554000 26153000 28122000 27765000 24430000 19632000 49678000 25208 3358 22998 212392;212393;212394;212395;212396;212397;212398;212399;212400;212401;212402;212403 169691;169692;169693;169694;169695;169696;169697;169698;169699;169700;169701;169702;169703;169704;169705 169695 15 IRQLIDEGIAPEEGGVDAK Unmodified 2009.0429 0.042934032 3182 Q86WB0 ZC3HC1 Nuclear-interacting partner of ALK yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 65.594 64.752 3 1.1376E-05 86228 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.022 59.442 141540000 37930000 0 28329000 2292100 3207400 9588300 0 7543300 3535600 10119000 8716400 7685100 4315900 7261700 11020000 25209 3182 22999 212404;212405;212406;212407;212408;212409;212410;212411;212412;212413;212414;212415;212416 169706;169707;169708;169709 169707 4 IRQNEINNPK Unmodified 1224.6575 0.65748349 2539 Q15459 SF3A1 Splicing factor 3A subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 11.659 11.806 2;3 1.6432E-15 10003 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 172.59 142.82 1457300000 0 0 0 63723000 74911000 94646000 108330000 103460000 81942000 114860000 76270000 211110000 142750000 150360000 234980000 25210 2539 23000 212417;212418;212419;212420;212421;212422;212423;212424;212425;212426;212427;212428;212429;212430;212431;212432;212433;212434;212435;212436;212437;212438;212439;212440 169710;169711;169712;169713;169714;169715;169716;169717;169718;169719;169720;169721;169722;169723;169724;169725 169714 3 IRQPAACPGGEEVDGAPR Unmodified 1878.9006 0.90064367 3538 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 34.498 34.999 3 4.5509E-06 37734 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 75.682 65.089 45420000 0 0 0 0 0 0 0 0 0 0 13835000 0 0 12525000 19060000 25211 3538 23001 212441;212442;212443 169726;169727;169728 169728 3 IRQQEIEEK Unmodified 1171.6197 0.619701 4695 Q9NWB6 ARGLU1 Arginine and glutamate-rich protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.68 1.57 1 24 1 2 2 2 2 2 2 2 2 2 2 2 2 12.052 12.102 2;3 0.0024762 10620 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 98.044 60.488 460230000 0 0 62537000 22980000 26952000 34675000 36371000 27136000 29817000 37402000 23251000 48636000 38097000 31366000 41014000 25212 4695 23002 212444;212445;212446;212447;212448;212449;212450;212451;212452;212453;212454;212455;212456;212457;212458;212459;212460;212461;212462;212463;212464;212465;212466;212467;212468 169729;169730;169731;169732;169733;169734;169735;169736;169737;169738;169739;169740;169741 169739 10 IRRDEEGNEIK Unmodified 1357.695 0.69499121 3560 Q8WVC0 LEO1 RNA polymerase-associated protein LEO1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 2 2 2 1 2 2 2 2 2 2 2 7.969 8.1064 2;3 0.00045253 5004 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 100.72 50.438 828750000 0 0 0 1004200 21991000 26305000 31054000 1513900 40030000 51620000 197280000 147280000 117760000 96494000 96417000 25213 3560 23003 212469;212470;212471;212472;212473;212474;212475;212476;212477;212478;212479;212480;212481;212482;212483;212484;212485;212486;212487;212488;212489;212490 169742;169743;169744;169745;169746;169747;169748;169749;169750 169746 6 IRSDLQRTQDDDTVNK Unmodified 1902.9395 0.93953159 317 O43314 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 yes yes 0 0 2 By MS/MS 2 0 1 1 25.492 20.414 3 0.026202 28802 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.172 48.488 5813400 5813400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25214 317 23004 212491 169751 169751 1 IRSTLNEIYFGK Unmodified 1439.7773 0.77726428 1525 P47756 CAPZB F-actin-capping protein subunit beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 64.845 64.988 3 0.0067598 74078 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 46.985 28.019 92998000 0 0 0 3656500 0 0 4247000 9980800 10534000 8018400 0 15659000 9323000 8352500 23227000 25215 1525 23005 212492;212493;212494;212495;212496;212497;212498;212499;212500 169752;169753;169754;169755 169754 4 IRTDAGFTLR Unmodified 1148.6302 0.63020611 1073 P18206 VCL Vinculin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 47.398 47.841 3 0.0085681 53215 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 41.689 25.491 36740000 0 0 0 0 0 4118800 0 0 0 0 4491500 6236500 0 5476000 16417000 25216 1073 23006 212501;212502;212503;212504;212505 169756;169757 169757 2 IRTEDSEASTCVIIK Unmodified 1720.8665 0.86654957 2685 Q4J6C6 PREPL Prolyl endopeptidase-like yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 51.505 45.516 3 0.00042654 57350 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 71.531 59.63 24145000 8687600 0 15457000 0 0 0 0 0 0 0 0 0 0 0 0 25217 2685 23007 212506;212507 169758;169759;169760;169761 169760 4 IRTIELDGK Unmodified 1043.5975 0.597509 1911;4338;1824;3689 P62820;P61006;Q92930;Q9H0U4 RAB1A;RAB8A;RAB8B;RAB1B Ras-related protein Rab-1A;Ras-related protein Rab-8A;Ras-related protein Rab-8B;Ras-related protein Rab-1B no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38.5 37.584 2 1.1256E-05 52762 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 165.15 107.87 1233800000 564380000 90375000 62143000 21908000 21843000 24952000 35656000 42922000 33248000 47152000 59109000 70220000 51558000 39992000 68343000 25218 1911;1824;3689;4338 23008 212508;212509;212510;212511;212512;212513;212514;212515;212516;212517;212518;212519;212520;212521;212522 169762;169763;169764;169765;169766 169763 1 IRTTETQVLVASAQK Unmodified 1643.9206 0.92063405 961 P12081 HARS Histidine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.19 3.64 3 3 10 3 2 1 1 1 1 1 1 1 1 1 1 1 48.002 46.054 3 2.6559E-10 64717 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.214 75.875 487950000 335560000 24130000 9740500 8404900 0 7223100 3859200 0 4682600 9209900 14484000 13778000 7804100 9225300 39852000 25219 961 23009 212523;212524;212525;212526;212527;212528;212529;212530;212531;212532;212533;212534;212535;212536;212537;212538 169767;169768;169769;169770;169771;169772;169773;169774;169775;169776;169777;169778;169779;169780;169781;169782;169783;169784 169778 18 IRTVEINGEK Unmodified 1157.6404 0.64043645 2512 Q15286 RAB35 Ras-related protein Rab-35 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 32.469 27.755 3 0.019167 38812 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.829 28.356 58041000 53082000 0 4959500 0 0 0 0 0 0 0 0 0 0 0 0 25220 2512 23010 212539;212540 169785;169786 169785 2 IRVDAQPVK Unmodified 1024.6029 0.60292873 1569 P49366 DHPS Deoxyhypusine synthase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 30.744 26.261 2 0.012322 33186 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 128.36 63.109 242090000 160980000 16519000 64583000 0 0 0 0 0 0 0 0 0 0 0 0 25221 1569 23011 212541;212542;212543 169787;169788 169788 1 IRVDVADQAQDK Unmodified 1356.6997 0.69974224 1166 P23588 EIF4B Eukaryotic translation initiation factor 4B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.68 1.57 1 24 1 2 2 2 2 2 2 2 2 2 2 2 2 32.762 32.804 2;3 1.6229E-13 34683 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 156.69 93.28 1240500000 0 0 7567600 44274000 44998000 41125000 59880000 53732000 48046000 81309000 152460000 254460000 70443000 135440000 246730000 25222 1166 23012 212544;212545;212546;212547;212548;212549;212550;212551;212552;212553;212554;212555;212556;212557;212558;212559;212560;212561;212562;212563;212564;212565;212566;212567;212568 169789;169790;169791;169792;169793;169794;169795;169796;169797;169798;169799;169800;169801;169802;169803;169804;169805;169806;169807;169808;169809;169810;169811;169812 169803 22 IRYEDEISK Unmodified 1151.5823 0.58225287 99 Q6KB66;CON__Q6KB66-1 KRT80 Keratin, type II cytoskeletal 80 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.862 30.053 3 0.0011833 33034 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 112.71 88.622 + 310010000 0 0 0 69804000 14294000 15521000 16734000 39533000 11699000 25090000 17521000 37316000 35408000 13832000 13254000 25223 99 23013 212569;212570;212571;212572;212573;212574;212575;212576;212577;212578;212579;212580 169813;169814;169815;169816;169817 169816 2 IRYESGDHVAVYPANDSALVNQLGK Unmodified 2715.3616 0.36164241 1039 P16435 POR NADPH--cytochrome P450 reductase yes yes 0 0 1 By MS/MS 2 0 1 1 79.562 71.432 4 8.7299E-08 93845 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.152 59.693 22536000 22536000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25224 1039 23014 212581 169818;169819 169818 2 IRYESLTDPSK Unmodified 1307.6721 0.67213051 862;850;2716;2715 P07900;P08238;Q58FF7;Q58FF6;Q58FF8 HSP90AA1;HSP90AB1;HSP90AB3P;HSP90AB4P;HSP90AB2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 4;Putative heat shock protein HSP 90-beta 2 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.7 3.93 2 21 6 24 15 9 5 2 2 2 2 2 2 2 2 2 2 2 2 45.062 43.343 2;3 1.9384E-26 42012 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 218.11 218.11 65712000000 23489000000 5944800000 5404600000 1213800000 1053200000 3795900000 1454800000 1156400000 1274900000 2977500000 4531000000 2865300000 2507200000 2588500000 5455800000 25225 850;862;2715;2716 23015 212582;212583;212584;212585;212586;212587;212588;212589;212590;212591;212592;212593;212594;212595;212596;212597;212598;212599;212600;212601;212602;212603;212604;212605;212606;212607;212608;212609;212610;212611;212612;212613;212614;212615;212616;212617;212618;212619;212620;212621;212622;212623;212624;212625;212626;212627;212628;212629;212630;212631;212632;212633;212634 169820;169821;169822;169823;169824;169825;169826;169827;169828;169829;169830;169831;169832;169833;169834;169835;169836;169837;169838;169839;169840;169841;169842;169843;169844;169845;169846;169847;169848;169849;169850;169851;169852;169853;169854;169855;169856;169857;169858;169859;169860;169861;169862;169863;169864;169865;169866;169867;169868;169869;169870;169871;169872;169873;169874;169875;169876;169877;169878;169879;169880;169881;169882;169883;169884;169885;169886;169887;169888;169889;169890;169891;169892;169893;169894;169895;169896;169897;169898;169899;169900;169901;169902;169903;169904;169905;169906 169842 82 IRYESLTDPSKLDSGK Unmodified 1807.9316 0.93159267 862;850;2716 P07900;P08238;Q58FF7;Q58FF8 HSP90AA1;HSP90AB1;HSP90AB3P;HSP90AB2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 2 no no 0 0 2 By MS/MS 2 0 2 2 57.317 49.137 3;4 0.0014121 67010 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.282 64.857 42642000 42642000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25226 850;862;2716 23016 212635;212636 169907;169908 169907 1 IRYNPGLDAK Unmodified 1145.6193 0.61930707 3431 Q8NEX9 SDR9C7 Short-chain dehydrogenase/reductase family 9C member 7 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 32.487 32.38 3 0.012905 35254 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 44.639 33.832 18894000 0 0 0 14040000 0 0 0 4853700 0 0 0 0 0 0 0 25227 3431 23017 212637;212638 169909;169910 169909 2 ISAEADVELNLVR Unmodified 1427.762 0.76200815 3533 Q8WTW4 NPRL2 Nitrogen permease regulator 2-like protein yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 2 1 2 1 1 1 2 78.104 78.168 2 0.0010753 88927 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 65.347 20.21 61977000 0 0 0 3247800 1324700 2340300 2075500 15245000 2225100 10280000 5554000 9224300 4454100 6006200 0 25228 3533 23018 212639;212640;212641;212642;212643;212644;212645;212646;212647;212648;212649;212650;212651;212652 169911;169912;169913;169914;169915;169916;169917;169918;169919 169917 9 ISAEGGEQVER Unmodified 1173.5626 0.56258006 4094 Q9BQE5 APOL2 Apolipoprotein L2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.364 20.566 2 1.5217E-06 20994 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 163.94 135.21 1262600000 0 0 0 74079000 93369000 86201000 120250000 104230000 64305000 94502000 140970000 121800000 149810000 128670000 84375000 25229 4094 23019 212653;212654;212655;212656;212657;212658;212659;212660;212661;212662;212663;212664 169920;169921;169922;169923;169924;169925;169926;169927;169928;169929;169930;169931;169932;169933;169934 169924 15 ISAFGYLECSAK Unmodified 1344.6384 0.63838754 858 P08134 RHOC Rho-related GTP-binding protein RhoC yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.884 74.947 2 0.00083838 86545 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.781 61.254 132150000 0 0 0 4228500 5088500 6975300 5612400 8772700 7384400 11670000 17050000 19896000 9492400 8538200 27443000 25230 858 23020 212665;212666;212667;212668;212669;212670;212671;212672;212673;212674;212675;212676 169935;169936;169937;169938;169939;169940;169941 169939 7 ISAHQGAQVDSR Unmodified 1267.6269 0.62691165 616 O95049 TJP3 Tight junction protein ZO-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 1 2 2 1 2 2 2 2 10.596 10.713 2;3 0.0023783 8780 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.283 44.503 173510000 0 0 0 15187000 13185000 19914000 12137000 8110600 9332800 17294000 12350000 17062000 17216000 12747000 18972000 25231 616 23021 212677;212678;212679;212680;212681;212682;212683;212684;212685;212686;212687;212688;212689;212690;212691;212692;212693;212694;212695;212696;212697;212698 169942;169943;169944;169945;169946;169947;169948;169949;169950;169951;169952;169953;169954;169955;169956;169957 169947 12 ISALALLK Unmodified 827.54804 0.54803961 3684 Q92905 COPS5 COP9 signalosome complex subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 79.363 78.198 2 0.002447 96192 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 124.59 63.834 519850000 209360000 95063000 36859000 0 7790000 10434000 10930000 13998000 6105300 20251000 19308000 12749000 11700000 16764000 48531000 25232 3684 23022 212699;212700;212701;212702;212703;212704;212705;212706;212707;212708;212709;212710;212711;212712;212713 169958;169959;169960;169961;169962;169963;169964;169965;169966;169967;169968;169969;169970;169971;169972;169973;169974 169970 17 ISALENSK Unmodified 860.46035 0.46034682 3148 Q86UE8 TLK2 Serine/threonine-protein kinase tousled-like 2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 18.274 14.703 2 0.011431 19914 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.36 37.002 38077000 0 38077000 0 0 0 0 0 0 0 0 0 0 0 0 0 25233 3148 23023 212714;212715 169975 169975 1 ISALEQVDDWSNK Unmodified 1503.7205 0.72053726 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 74.482 72.222 2 6.0025E-21 89953 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 160.36 136.07 48404000 0 41056000 0 0 0 0 0 0 0 0 0 7348100 0 0 0 25234 2291 23024 212716;212717;212718;212719;212720 169976;169977;169978;169979;169980 169978 4 ISALGEEK Unmodified 845.44945 0.44944778 341 O43548 TGM5 Protein-glutamine gamma-glutamyltransferase 5 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 22.406 22.445 2 0.038354 23216 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 51.059 7.8453 31854000 0 0 0 11452000 2249600 0 0 10080000 0 6110300 0 0 1962800 0 0 25235 341 23025 212721;212722;212723;212724;212725 169981 169981 1 ISALMDK Unmodified 776.41023 0.4102255 3062 Q7LBR1 CHMP1B Charged multivesicular body protein 1b yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 3 9 1 1 1 1 1 1 1 1 1 1 1 1 31.561 30.528 2 0.023353 31953 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.626 45.256 474180000 19146000 332490000 5406300 14974000 7763200 0 0 8118100 0 9958500 11175000 18627000 10183000 8926700 27411000 25236 3062 23026 212726;212727;212728;212729;212730;212731;212732;212733;212734;212735;212736;212737 169982;169983;169984;169985 169984 4 ISALMDK Oxidation (M) 792.40514 0.40514012 3062 Q7LBR1 CHMP1B Charged multivesicular body protein 1b yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 20.905 17.691 2 0.047031 23423 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.189 22.89 129020000 0 123060000 5961600 0 0 0 0 0 0 0 0 0 0 0 0 25237 3062 23026 212738;212739 169986 169986 1 ISANENSLAVR Unmodified 1172.6149 0.61494998 4893 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 42.593 37.651 2 0.006096 48767 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.886 57.276 29770000 0 29770000 0 0 0 0 0 0 0 0 0 0 0 0 0 25238 4893 23027 212740;212741 169987 169987 1 ISANENSLAVRSTPAEDDSRDSQVK Unmodified 2688.2951 0.29507899 4893 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 yes yes 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 46.59 40.825 4 1.842E-12 51704 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 77.681 67.622 51298000 8093000 0 43205000 0 0 0 0 0 0 0 0 0 0 0 0 25239 4893 23028 212742;212743 169988;169989;169990 169990 3 ISANLYK Unmodified 807.44905 0.44905385 2332 Q13620 CUL4B Cullin-4B yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 32.531 32.858 2 0.023359 34973 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.427 32.886 81475000 0 0 0 0 0 13920000 1455500 0 0 16259000 0 13587000 12756000 1558300 21939000 25240 2332 23029 212744;212745;212746;212747;212748;212749;212750 169991;169992;169993 169992 3 ISAPELLLHSPAR Unmodified 1402.7932 0.79324869 2818 Q5VUA4 ZNF318 Zinc finger protein 318 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.245 74.306 3 0.0019742 85561 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 53.001 46.421 105340000 0 0 0 5103200 4471200 9011600 7059300 10801000 5652100 10638000 7807200 9841300 10394000 9344400 15221000 25241 2818 23030 212751;212752;212753;212754;212755;212756;212757;212758;212759;212760;212761;212762 169994;169995;169996;169997;169998;169999;170000;170001;170002;170003;170004;170005 170000 12 ISAPNVDFNLEGPK Unmodified 1499.762 0.76200815 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.114 78.173 2 2.7454E-16 90301 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 119.76 102.33 480780000 0 0 0 13230000 27260000 33246000 36438000 38432000 36014000 45300000 37746000 54783000 50545000 39615000 68169000 25242 2172 23031 212763;212764;212765;212766;212767;212768;212769;212770;212771;212772;212773;212774 170006;170007;170008;170009;170010;170011;170012;170013;170014;170015;170016;170017;170018 170018 13 ISAQVVDYYK Unmodified 1184.6077 0.60773933 4386 Q9H3S7 PTPN23 Tyrosine-protein phosphatase non-receptor type 23 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 56.636 56.997 2 0.021799 64582 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 46.457 28.548 14018000 0 0 0 0 0 0 0 0 0 6572300 0 7446200 0 0 0 25243 4386 23032 212775;212776 170019 170019 1 ISATEDTPEAEGEVPELYHQR Unmodified 2370.0975 0.097548378 3813 Q96EK5 KIAA1279 KIF1-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 64.604 64.882 3 2.3745E-21 73575 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.391 88.679 104430000 0 0 0 0 0 0 10746000 0 0 17979000 17803000 13013000 9189400 10405000 25291000 25244 3813 23033 212777;212778;212779;212780;212781;212782;212783 170020;170021;170022;170023;170024;170025;170026;170027 170023 8 ISATEDTPEAEGEVPELYHQRK Unmodified 2498.1925 0.1925114 3813 Q96EK5 KIAA1279 KIF1-binding protein yes yes 0 0 1 By MS/MS By MS/MS 2 0 4 2 2 64.127 58.099 3;4 5.5404E-61 72365 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 100.28 100.28 208320000 50221000 0 158100000 0 0 0 0 0 0 0 0 0 0 0 0 25245 3813 23034 212784;212785;212786;212787 170028;170029;170030 170030 3 ISATSIFFESMPYK Unmodified 1619.7905 0.79053108 1335;1336 P34896;P34897 SHMT1;SHMT2 Serine hydroxymethyltransferase, cytosolic;Serine hydroxymethyltransferase, mitochondrial no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.57 3.96 3 4 1 1 1 1 1 1 1 92.685 90.516 2 0.0011973 113441 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.896 57.02 78753000 60002000 9394500 1706500 0 961280 0 0 0 0 1756000 1588500 0 0 0 3343500 25246 1335;1336 23035 212788;212789;212790;212791;212792;212793;212794 170031;170032;170033 170031 2 ISATSIFFESMPYK Oxidation (M) 1635.7854 0.7854457 1335;1336 P34896;P34897 SHMT1;SHMT2 Serine hydroxymethyltransferase, cytosolic;Serine hydroxymethyltransferase, mitochondrial no no 0 1 0 By MS/MS By matching By MS/MS 7.33 3.77 1 2 1 1 1 85.78 83.199 2 1.1149E-09 105959 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 111.63 93.571 58503000 42299000 0 0 0 0 0 0 0 0 0 5454800 0 0 0 10749000 25247 1335;1336 23035 212795;212796;212797 170034;170035 170035 2011 2 ISAVESQPSR Unmodified 1072.5513 0.55128709 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 19.191 19.204 2 0.0014272 19672 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 91.867 51.769 92982000 0 0 0 0 35140000 0 33289000 638900 23914000 0 0 0 0 0 0 25248 5216 23036 212798;212799;212800;212801 170036;170037 170037 2 ISAVESQPSRK Unmodified 1200.6463 0.64625011 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 12.261 12.409 2;3 0.00092524 11228 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 113.74 78.295 648390000 0 0 0 37485000 44197000 39974000 51512000 44884000 48599000 76763000 45506000 75429000 71432000 48035000 64570000 25249 5216 23037 212802;212803;212804;212805;212806;212807;212808;212809;212810;212811;212812;212813;212814;212815;212816;212817;212818;212819;212820;212821;212822;212823;212824;212825 170038;170039;170040;170041;170042;170043;170044;170045;170046;170047;170048;170049;170050;170051;170052;170053;170054;170055;170056;170057 170053 4 ISAVQFPESADTTAK Unmodified 1563.7781 0.77805214 2406 Q14432 PDE3A cGMP-inhibited 3',5'-cyclic phosphodiesterase A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 61.437 60.7 2 3.9119E-31 69241 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 151.78 105.07 1038500000 0 460130000 0 36286000 39027000 45481000 42433000 0 38700000 62275000 62631000 72259000 51039000 52849000 75427000 25250 2406 23038 212826;212827;212828;212829;212830;212831;212832;212833;212834;212835;212836;212837;212838 170058;170059;170060;170061;170062;170063;170064;170065;170066;170067;170068;170069 170059 11 ISAVSVAER Unmodified 930.51345 0.51344502 2152 Q08211 DHX9 ATP-dependent RNA helicase A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 34.23 34.509 2 0.0051384 37889 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 82.426 17.859 124890000 0 0 0 12728000 0 0 0 0 11760000 19595000 0 17688000 21827000 19615000 21676000 25251 2152 23039 212839;212840;212841;212842;212843;212844;212845 170070;170071;170072;170073 170070 3 ISAWHNNVEK Unmodified 1196.5938 0.5938206 2401 Q14258 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27.362 26.584 3 0.0012565 38741 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.744 57.754 437210000 181770000 76241000 16056000 14855000 7275100 12517000 9976300 8807800 8651400 15862000 15460000 18552000 13527000 14449000 23207000 25252 2401 23040 212846;212847;212848;212849;212850;212851;212852;212853;212854;212855;212856;212857;212858;212859;212860 170074;170075;170076;170077;170078;170079;170080;170081 170075 8 ISCAGPQTYK Unmodified 1123.5332 0.53319418 3913 Q96KR1 ZFR Zinc finger RNA-binding protein yes yes 0 0 0 By MS/MS 2 0 1 1 26.359 22.099 2 0.0042337 29220 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.601 65.678 21509000 0 21509000 0 0 0 0 0 0 0 0 0 0 0 0 0 25253 3913 23041 212861 170082;170083;170084 170084 3 ISCGGGINVDVNQHPDGGPGGK Unmodified 2133.9862 0.98616421 3833 Q96F45 ZNF503 Zinc finger protein 503 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 47.127 47.444 3 0.02951 53338 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 20.921 11.341 39491000 0 0 0 0 0 4640800 0 5589200 0 7316300 7530400 8598900 5815700 0 0 25254 3833 23042 212862;212863;212864;212865;212866;212867 170085 170085 1 ISCLEAEK Unmodified 948.45863 0.45863226 4661 Q9NV70 EXOC1 Exocyst complex component 1 yes yes 0 0 0 By MS/MS 2 0 1 1 25.968 21.765 2 0.024519 28514 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.191 41.544 37143000 0 37143000 0 0 0 0 0 0 0 0 0 0 0 0 0 25255 4661 23043 212868 170086 170086 1 ISDAELEAELEK Unmodified 1345.6613 0.66129105 3554 Q8WUX9 CHMP7 Charged multivesicular body protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 69.683 69.946 2 2.3922E-05 79798 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 117.99 72.306 102810000 0 0 0 0 0 0 15385000 0 0 0 20444000 21949000 12019000 14014000 19003000 25256 3554 23044 212869;212870;212871;212872;212873;212874 170087;170088;170089;170090;170091;170092 170088 3 ISDCTQYLRTEEEL Unmodified 1755.7985 0.79852959 3435 Q8NEZ3 WDR19 WD repeat-containing protein 19 yes yes 0 0 1 By MS/MS 2 0 1 1 73.757 68.278 2 1.4453E-13 86285 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.24 114.13 12420000 0 12420000 0 0 0 0 0 0 0 0 0 0 0 0 0 25257 3435 23045 212875 170093 170093 1 ISDDLMQK Oxidation (M) 964.45355 0.45354688 308 O43242 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.65 1.53 1 19 1 2 2 2 1 1 1 2 1 2 1 2 2 20.839 20.795 2 0.0053449 21036 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 87.323 47.219 356810000 0 4732800 0 29143000 32854000 35485000 8132400 4418200 7326000 57372000 38004000 105440000 7489000 16359000 10057000 25258 308 23046 212876;212877;212878;212879;212880;212881;212882;212883;212884;212885;212886;212887;212888;212889;212890;212891;212892;212893;212894;212895 170094;170095;170096;170097;170098;170099;170100;170101;170102;170103;170104;170105;170106;170107 170104 400 12 ISDDLMQK Unmodified 948.45863 0.45863226 308 O43242 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 34.912 35.108 2 0.005423 39023 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 135.6 70.795 331590000 0 0 0 20736000 23529000 41160000 0 0 6959600 59095000 58237000 69809000 10309000 15391000 26359000 25259 308 23046 212896;212897;212898;212899;212900;212901;212902;212903;212904;212905 170108;170109;170110;170111;170112;170113;170114;170115 170108 7 ISDDRLTVVGEK Unmodified 1330.7092 0.70924429 4846 Q9UBL3 ASH2L Set1/Ash2 histone methyltransferase complex subunit ASH2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.15 2.41 2 1 24 1 1 1 2 2 2 2 2 2 2 2 2 2 2 2 41.258 40.808 2;3 0.0040865 56802 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.004 37.101 743500000 17814000 32329000 53150000 36144000 38464000 45331000 50105000 49093000 34830000 51633000 58085000 86285000 57419000 52093000 80721000 25260 4846 23047 212906;212907;212908;212909;212910;212911;212912;212913;212914;212915;212916;212917;212918;212919;212920;212921;212922;212923;212924;212925;212926;212927;212928;212929;212930;212931;212932 170116;170117;170118;170119;170120;170121;170122;170123;170124;170125 170119 7 ISDEGIAYLVK Unmodified 1206.6496 0.64960415 1347 P35249 RFC4 Replication factor C subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.83 3.5 4 1 13 2 2 1 1 2 1 1 1 1 1 1 1 1 1 1 76.197 75.17 2 1.1665E-16 93535 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 171.36 129.93 1800600000 18301000 592520000 19557000 57445000 75606000 76194000 115390000 82994000 70554000 103410000 119050000 143030000 89667000 85051000 151800000 25261 1347 23048 212933;212934;212935;212936;212937;212938;212939;212940;212941;212942;212943;212944;212945;212946;212947;212948;212949;212950 170126;170127;170128;170129;170130;170131;170132;170133;170134;170135;170136;170137;170138;170139;170140;170141;170142;170143 170129 16 ISDFARK Unmodified 835.4552 0.45520186 2211 Q12933 TRAF2 TNF receptor-associated factor 2 yes yes 0 0 1 By MS/MS 2 0 1 1 17.571 13.191 2 0.032422 19364 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 127.66 74.136 59192000 59192000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25262 2211 23049 212951 170144 170144 0 ISDFGLATVFR Unmodified 1224.6503 0.65027285 210 O14757 CHEK1 Serine/threonine-protein kinase Chk1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS 10 0 4 1 1 1 1 87.118 87.233 2 0.0052806 100870 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.426 35.633 8600000 0 0 0 0 0 0 0 0 0 0 0 0 3053900 1997200 3549000 25263 210 23050 212952;212953;212954;212955 170145;170146 170146 2 ISDIITRNTNDPGVGSK Unmodified 1785.9221 0.92209062 3131 Q86T24 ZBTB33 Transcriptional regulator Kaiso yes yes 0 0 1 By MS/MS 2 0 1 1 48.29 44.388 3 0.016884 55892 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 34.485 23.206 6662700 0 0 6662700 0 0 0 0 0 0 0 0 0 0 0 0 25264 3131 23051 212956 170147;170148 170148 2 ISDIQSQLEK Unmodified 1159.6085 0.60846762 4675 Q9NVP1 DDX18 ATP-dependent RNA helicase DDX18 yes yes 0 0 0 By MS/MS 2 0 1 1 48.161 42.598 2 0.00029853 55411 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.67 25.402 27000000 0 27000000 0 0 0 0 0 0 0 0 0 0 0 0 0 25265 4675 23052 212957 170149 170149 1 ISDISMEVGRK Unmodified 1233.6387 0.63872189 1187 P25391 LAMA1 Laminin subunit alpha-1 yes yes 0 0 1 By matching By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 40.086 40.566 3 0.0087023 44114 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.015 24.984 25907000 0 0 0 0 0 0 0 0 0 3501500 4935900 5739100 0 4794300 6936300 25266 1187 23053 212958;212959;212960;212961;212962 170150 170150 1 ISDQDLNR Unmodified 959.46722 0.46722311 4026 Q99575 POP1 Ribonucleases P/MRP protein subunit POP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 2 1 1 1 2 2 2 2 2 22.198 22.392 2 0.0045978 20366 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 130.04 78.467 135620000 0 0 0 13502000 3669600 10902000 2819700 17207000 0 20852000 20483000 27047000 19139000 0 0 25267 4026 23054 212963;212964;212965;212966;212967;212968;212969;212970;212971;212972;212973;212974;212975;212976;212977 170151;170152;170153;170154;170155;170156;170157;170158;170159 170159 5 ISDQNIIPSVTR Unmodified 1341.7252 0.72522871 2994 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes yes 0 0 0 By MS/MS 10 0 1 1 65.292 65.844 2 0.011599 74967 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.754 31.667 45035000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45035000 25268 2994 23055 212978 170160 170160 1 ISDSEGFK Unmodified 881.41306 0.41306227 1151 P23246 SFPQ Splicing factor, proline- and glutamine-rich yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.87 21.076 2 0.01524 21979 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 69.198 29.535 663360000 0 0 0 37923000 32858000 41515000 65939000 30201000 33801000 59315000 69084000 89126000 47543000 64791000 91260000 25269 1151 23056 212979;212980;212981;212982;212983;212984;212985;212986;212987;212988;212989;212990 170161;170162;170163 170162 2 ISDSNDQESANCDAK Unmodified 1652.6584 0.65840729 5245 Q9Y5Q9 GTF3C3 General transcription factor 3C polypeptide 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 9.4892 9.6223 2 2.8895E-28 6396 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 169.23 163.89 56452000 0 0 0 2650200 3093100 3512500 2560100 2540600 3570700 3484600 9337700 6924200 6467400 5890700 6419900 25270 5245 23057 212991;212992;212993;212994;212995;212996;212997;212998;212999;213000;213001;213002 170164;170165;170166;170167;170168;170169;170170 170166 7 ISDSVLVDIK Unmodified 1087.6125 0.61249036 1548 P48643 CCT5 T-complex protein 1 subunit epsilon yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.96 3.9 1 8 4 12 5 7 1 1 1 1 1 1 1 1 1 1 1 1 1 74.107 72.463 2 8.3516E-07 90881 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 152.06 76.872 7310300000 373350000 6495300000 94424000 5216500 11012000 33931000 15562000 9951800 15699000 48878000 45868000 34505000 18242000 38143000 70138000 25271 1548 23058 213003;213004;213005;213006;213007;213008;213009;213010;213011;213012;213013;213014;213015;213016;213017;213018;213019;213020;213021;213022;213023;213024;213025;213026;213027 170171;170172;170173;170174;170175;170176;170177;170178;170179;170180;170181;170182;170183;170184;170185;170186;170187;170188;170189;170190;170191;170192;170193;170194;170195;170196;170197;170198;170199;170200;170201;170202;170203 170190 33 ISDSVLVDIKDTEPLIQTAK Unmodified 2184.1889 0.18892957 1548 P48643 CCT5 T-complex protein 1 subunit epsilon yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 89.873 85.819 3 2.3386E-08 106992 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.959 61.837 36104000 0 36104000 0 0 0 0 0 0 0 0 0 0 0 0 0 25272 1548 23059 213028;213029 170204 170204 1 ISDTEELPEFK Unmodified 1306.6293 0.62926264 3711 Q93100 PHKB Phosphorylase b kinase regulatory subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 64.856 64.803 2 0.01443 74160 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 45.565 24.664 21133000 0 0 0 5797100 3923500 0 0 0 1523000 0 5735900 4153900 0 0 0 25273 3711 23060 213030;213031;213032;213033;213034;213035 170205;170206 170206 2 ISDTGLAAGTVPEK Unmodified 1357.7089 0.70890994 3061 Q7LBC6 KDM3B Lysine-specific demethylase 3B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 47.623 47.844 2 2.4776E-72 53438 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 240.33 197.04 752940000 0 0 0 0 55955000 75663000 70497000 73921000 68858000 92701000 106670000 106670000 0 0 102010000 25274 3061 23061 213036;213037;213038;213039;213040;213041;213042;213043;213044 170207;170208;170209;170210;170211;170212;170213;170214;170215;170216 170215 10 ISDVIEDSVVEDYNSVDK Unmodified 2024.9426 0.94261087 3084 Q7Z3K3 POGZ Pogo transposable element with ZNF domain yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 1 1 6 2 1 1 1 1 1 1 79.586 78.659 2 3.7261E-58 96254 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 189.3 183.8 129970000 0 94961000 0 0 4061700 0 0 2950500 4313700 6742800 0 8347000 0 0 8589900 25275 3084 23062 213045;213046;213047;213048;213049;213050;213051;213052 170217;170218;170219;170220;170221;170222 170218 6 ISEAFVK Unmodified 792.43815 0.43815481 3500 Q8TDB6 DTX3L E3 ubiquitin-protein ligase DTX3L yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 36.291 36.576 2 0.040686 39970 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 68.485 28.036 57536000 0 0 0 874390 0 1061600 0 0 0 7904200 10419000 11558000 8045300 7180100 10493000 25276 3500 23063 213053;213054;213055;213056;213057;213058;213059;213060 170223 170223 1 ISECVQSDTHTDNQTGK Unmodified 1918.8327 0.83268326 420 O60658 PDE8A High affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 18.962 18.59 3 8.0495E-19 23147 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.82 117.42 54030000 0 22956000 0 1813600 2583000 3028700 1880500 2172200 2652400 3820600 2108600 3077400 2281900 2023500 3632200 25277 420 23064 213061;213062;213063;213064;213065;213066;213067;213068;213069;213070;213071;213072;213073;213074 170224;170225;170226;170227;170228;170229;170230;170231 170228 8 ISEDESSGLVYK Unmodified 1325.6351 0.6350763 5 A0JNW5 UHRF1BP1L UHRF1-binding protein 1-like yes yes 0 0 0 By MS/MS 2 0 1 1 47.403 41.84 2 0.013193 54548 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.342 23.836 16020000 0 16020000 0 0 0 0 0 0 0 0 0 0 0 0 0 25278 5 23065 213075 170232;170233 170233 2 ISEDKNPDYR Unmodified 1235.5782 0.57823012 1010 P14923 JUP Junction plakoglobin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 13.316 13.341 3 0.012362 12301 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 39.785 31.653 69024000 0 0 0 12121000 5824100 0 4442400 42741000 1201200 2694500 0 0 0 0 0 25279 1010 23066 213076;213077;213078;213079;213080;213081 170234;170235 170234 2 ISEDVEER Unmodified 975.4509 0.45090434 1756 P55081 MFAP1 Microfibrillar-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 18.668 18.787 2 0.0067838 18800 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 97.093 36.445 194870000 0 0 0 18904000 19298000 19273000 22135000 15813000 13653000 23647000 23883000 0 23216000 15047000 0 25280 1756 23067 213082;213083;213084;213085;213086;213087;213088;213089;213090;213091;213092 170236;170237;170238;170239;170240;170241;170242;170243;170244;170245 170242 9 ISEEALR Unmodified 816.43413 0.43413207 3831 Q96F10 SAT2 Diamine acetyltransferase 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 25.108 25.311 2 0.02333 26258 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 90.986 28.271 2092300000 0 0 0 312990000 404860000 354950000 7151500 0 0 0 387080000 607390000 0 7964500 9915900 25281 3831 23068 213093;213094;213095;213096;213097;213098;213099;213100 170246;170247;170248;170249 170247 3 ISEECIAQWK Unmodified 1262.5965 0.59652272 1740 P54577 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 60.826 59.88 2 0.0025423 67435 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.563 58.77 471060000 0 329580000 4681200 20289000 4840100 6231100 0 9806200 4548600 15116000 12917000 10196000 23057000 9701400 20100000 25282 1740 23069 213101;213102;213103;213104;213105;213106;213107;213108;213109;213110;213111;213112;213113;213114 170250;170251;170252;170253;170254;170255;170256;170257;170258 170252 7 ISEEDELDTK Unmodified 1177.535 0.5350279 2498 Q15121 PEA15 Astrocytic phosphoprotein PEA-15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 30.115 28.934 2 0.00091496 35761 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.62 40.743 97758000 14089000 27463000 0 0 0 0 2099900 0 0 0 12122000 7948800 0 11007000 23028000 25283 2498 23070 213115;213116;213117;213118;213119;213120;213121 170259;170260;170261;170262;170263;170264 170259 6 ISEENIK Unmodified 831.4338 0.43379771 3786 Q96CW1 AP2M1 AP-2 complex subunit mu yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 20.424 16.227 2 0.026085 21251 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.3 30.631 324710000 18036000 306670000 0 0 0 0 0 0 0 0 0 0 0 0 0 25284 3786 23071 213122;213123 170265 170265 0 ISEEQQQLQQALAPAQASSNSSTPTR Unmodified 2769.3529 0.35292822 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 68.31 68.399 3 3.8763E-10 79019 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 52.674 45.875 50918000 0 0 0 3555700 0 0 0 6054900 5434600 8243100 9118900 11911000 6600000 0 0 25285 2291 23072 213124;213125;213126;213127;213128;213129;213130 170266;170267;170268;170269;170270;170271;170272;170273;170274 170273 9 ISEEYFAQTDEEK Unmodified 1587.694 0.69404774 637 O95263 PDE8B High affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8B yes yes 0 0 0 By MS/MS 10 0 1 1 49.721 50.431 2 0.017391 56068 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.96 30.23 16858000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16858000 25286 637 23073 213131 170275 170275 1 ISEIEDAAFLAR Unmodified 1333.6878 0.68778057 506;600 O75477;O94905 ERLIN1;ERLIN2 Erlin-1;Erlin-2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 77.161 77.201 2 6.6665E-06 89138 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 132.01 103.61 54864000 0 0 0 5170200 3931000 4005800 3589400 4592600 4646000 4747200 6356800 6953300 6739200 4132300 0 25287 506;600 23074 213132;213133;213134;213135;213136;213137;213138;213139;213140;213141;213142 170276;170277;170278;170279;170280;170281;170282;170283;170284;170285;170286 170284 11 ISEIEDAAFLAREK Unmodified 1590.8253 0.82533668 506;600 O75477;O94905 ERLIN1;ERLIN2 Erlin-1;Erlin-2 no no 0 0 1 By MS/MS 2 0 1 1 74.578 71.73 3 0.0097613 87514 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 46.408 33.576 2266200 0 0 2266200 0 0 0 0 0 0 0 0 0 0 0 0 25288 506;600 23075 213143 170287 170287 1 ISEIQLEPNNFPK Unmodified 1527.7933 0.79330827 4332 Q9H0K6 PUS7L Pseudouridylate synthase 7 homolog-like protein yes yes 0 0 0 By MS/MS 2 0 2 2 77.516 75.18 2 0.00060785 93296 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.45 83.388 100310000 0 100310000 0 0 0 0 0 0 0 0 0 0 0 0 0 25289 4332 23076 213144;213145 170288 170288 1 ISEIQMTAPLK Unmodified 1229.669 0.66895938 2086 Q03001 DST Dystonin yes yes 0 0 0 By MS/MS 2 0 1 1 73.059 67.514 2 3.8651E-07 85391 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.71 86.46 29532000 0 29532000 0 0 0 0 0 0 0 0 0 0 0 0 0 25290 2086 23077 213146 170289 170289 1 ISELDAFLK Unmodified 1034.5648 0.56481189 2127 Q06323 PSME1 Proteasome activator complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 6.71 3.95 1 5 1 10 3 3 1 1 1 1 1 1 1 1 1 1 1 82.749 81.983 2 0.00050548 97185 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 127.56 28.568 3879800000 234770000 3133200000 179200000 21744000 15682000 50895000 33549000 31186000 23616000 57784000 0 1924300 36796000 59445000 0 25291 2127 23078 213147;213148;213149;213150;213151;213152;213153;213154;213155;213156;213157;213158;213159;213160;213161;213162;213163 170290;170291;170292;170293;170294;170295;170296;170297;170298;170299 170298 9 ISELDSMMSESDNSK Unmodified 1671.6968 0.69676663 2835 Q5W0B1 RNF219 RING finger protein 219 yes yes 0 0 0 By MS/MS 2 0 1 1 64.549 58.632 2 2.634E-06 75116 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.42 115.76 14122000 0 14122000 0 0 0 0 0 0 0 0 0 0 0 0 0 25292 2835 23079 213164 170300 170300 1 ISELGAGNGGVVFK Unmodified 1346.7194 0.71941505 2079 Q02750 MAP2K1 Dual specificity mitogen-activated protein kinase kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 4.83 3.67 3 1 2 3 1 1 1 69.061 65.744 2 5.1529E-14 74505 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 115.7 81.513 718680000 0 644810000 14806000 14640000 0 0 0 0 0 0 0 0 0 0 44423000 25293 2079 23080 213165;213166;213167;213168;213169;213170 170301;170302;170303;170304;170305;170306;170307 170304 6 ISELGAGNGGVVTK Unmodified 1300.6987 0.69867961 1373 P36507 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.214 41.393 2 9.2124E-17 45183 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 138.71 109.98 318310000 0 0 0 19461000 12971000 33378000 20702000 16612000 13138000 39027000 34782000 37669000 26854000 22183000 41533000 25294 1373 23081 213171;213172;213173;213174;213175;213176;213177;213178;213179;213180;213181;213182 170308;170309;170310;170311;170312;170313;170314;170315;170316;170317;170318;170319;170320;170321 170312 14 ISELIER Unmodified 858.48108 0.48108226 2768 Q5T1M5 FKBP15 FK506-binding protein 15 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 37.721 38.237 2 0.024125 41445 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 95.352 29.68 47711000 0 0 0 0 0 0 0 0 0 0 0 0 0 16795000 30917000 25295 2768 23082 213183;213184 170322 170322 1 ISELTTEVNK Unmodified 1132.5976 0.59756858 3917 Q96LB3 IFT74 Intraflagellar transport protein 74 homolog yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 37.261 37.241 2 0.0091847 41115 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 58.23 30.348 9659400 0 0 0 0 2457500 1592500 1440700 0 1931500 2237200 0 0 0 0 0 25296 3917 23083 213185;213186;213187;213188;213189;213190 170323;170324 170323 2 ISEMEEELK Unmodified 1106.5165 0.51654107 232 O14974 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 41.105 41.252 2 0.013982 46639 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 58.981 44.312 24294000 0 0 0 0 4266900 0 0 0 3291600 0 7223800 0 5888200 3623200 0 25297 232 23084 213191;213192;213193;213194;213195;213196 170325;170326;170327;170328 170328 4 ISEMIQGLATPVDLK Oxidation (M) 1629.8648 0.86475866 4668 Q9NVH2 INTS7 Integrator complex subunit 7 yes yes 0 1 0 By MS/MS 2 0 1 1 82.207 77.503 2 0.0022305 96397 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 63.691 49.41 45685000 0 45685000 0 0 0 0 0 0 0 0 0 0 0 0 0 25298 4668 23085 213197 170329 170329 6082 1 ISEMIQGLATPVDLK Unmodified 1613.8698 0.86984403 4668 Q9NVH2 INTS7 Integrator complex subunit 7 yes yes 0 0 0 By MS/MS 2 0 1 1 88.363 83.521 2 0.024064 103787 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 42.797 17.671 73958000 0 73958000 0 0 0 0 0 0 0 0 0 0 0 0 0 25299 4668 23085 213198 170330 170330 1 ISENMNLQFENQMNK 2 Oxidation (M) 1870.8189 0.81894745 3255 Q8IX12 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.12 3.26 2 2 12 4 1 1 1 1 1 1 1 1 1 1 1 1 45.755 44.474 2 2.042E-30 56408 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.74 113.49 138160000 0 34497000 0 0 0 13246000 8190900 8968900 9496700 6812100 11117000 13398000 16437000 6953100 9044800 25300 3255 23086 213199;213200;213201;213202;213203;213204;213205;213206;213207;213208;213209;213210;213211;213212;213213;213214 170331;170332;170333;170334;170335;170336;170337;170338;170339;170340;170341;170342;170343;170344 170335 4865;4866 12 ISENMNLQFENQMNK Oxidation (M) 1854.824 0.82403283 3255 Q8IX12 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.65 2.94 3 1 19 4 1 2 1 2 2 1 1 1 2 2 2 2 59.012 58.382 2 0 70170 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 286.86 271.98 214760000 0 104030000 0 1362600 7136500 5685500 8951200 9480800 7309800 6988300 8858500 13064000 11710000 12487000 17690000 25301 3255 23086 213215;213216;213217;213218;213219;213220;213221;213222;213223;213224;213225;213226;213227;213228;213229;213230;213231;213232;213233;213234;213235;213236;213237 170345;170346;170347;170348;170349;170350;170351;170352;170353;170354;170355;170356;170357;170358;170359;170360;170361;170362 170348 4865;4866 17 ISENMNLQFENQMNK Unmodified 1838.8291 0.82911821 3255 Q8IX12 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 71.597 69.266 2 0 86860 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 336.17 317.6 213650000 0 208340000 0 0 0 0 0 0 0 0 0 0 0 0 5305500 25302 3255 23086 213238;213239 170363;170364 170363 2 ISENQGVPVLIVANK Unmodified 1579.8934 0.89335667 1417 P40617 ARL4A ADP-ribosylation factor-like protein 4A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.517 76.575 2 0.00014597 88308 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 71.03 63.464 102450000 0 0 0 4449400 5991300 5787200 7591600 7969700 8388700 9577300 11460000 11709000 8601200 6910000 14012000 25303 1417 23087 213240;213241;213242;213243;213244;213245;213246;213247;213248;213249;213250;213251 170365;170366;170367;170368;170369;170370;170371;170372;170373;170374;170375;170376 170371 12 ISENSYSLDDLEIGPGQLSSSTFDSEK Unmodified 2917.3353 0.33527205 4893 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 90.805 86.744 3 4.4656E-07 107606 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 47.429 44.331 50791000 0 50791000 0 0 0 0 0 0 0 0 0 0 0 0 0 25304 4893 23088 213252;213253 170377 170377 1 ISEPEAEISPGSLPVTANMK Unmodified 2069.0351 0.035071462 3976 Q96RT1 ERBB2IP Protein LAP2 yes yes 0 0 0 By MS/MS 2 0 1 1 83.353 78.633 2 7.7888E-82 97745 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 193.51 188.35 32959000 0 32959000 0 0 0 0 0 0 0 0 0 0 0 0 0 25305 3976 23089 213254 170378 170378 1 ISEQFTAMFR Unmodified 1228.591 0.59104341 1963;842;2350;4182;2306 P07437;P68371;Q13509;Q13885;Q9BVA1 TUBB;TUBB4B;TUBB3;TUBB2A;TUBB2B Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-3 chain;Tubulin beta-2A chain;Tubulin beta-2B chain no no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 78.438 78.542 2 0.0019539 90788 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 97.431 54.832 51120000 0 0 0 0 2844500 3111200 2379300 2211800 2604100 6455900 4584900 7168000 3016400 3484400 13259000 25306 842;1963;2306;2350;4182 23090 213255;213256;213257;213258;213259;213260;213261;213262;213263;213264;213265 170379;170380;170381;170382;170383;170384;170385;170386;170387;170388 170380 10 ISEQFTAMFR Oxidation (M) 1244.586 0.58595803 1963;842;2350;4182;2306 P07437;P68371;Q13509;Q13885;Q9BVA1 TUBB;TUBB4B;TUBB3;TUBB2A;TUBB2B Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-3 chain;Tubulin beta-2A chain;Tubulin beta-2B chain no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 64.127 64.251 2 0.016005 73303 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 45.022 33.429 91023000 0 0 0 0 5691500 14200000 7767000 0 7560200 15909000 13303000 0 0 10478000 16114000 25307 842;1963;2306;2350;4182 23090 213266;213267;213268;213269;213270;213271;213272;213273 170389;170390;170391;170392;170393 170390 1040 3 ISESLVRHASTSSPADK Unmodified 1783.9064 0.90644055 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 1 By MS/MS 2 0 1 1 37.86 31.362 3 0.0030375 43692 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.787 33.385 9005600 9005600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25308 2775 23091 213274 170394 170394 1 ISESPSEIMESLTK Oxidation (M) 1565.7495 0.74945413 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.95 3.44 4 1 14 3 2 1 2 1 1 2 2 2 3 63.813 62.276 2 8.1102E-103 77534 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 226.33 208.9 297450000 0 212670000 9559600 0 3792300 23459000 6075100 0 0 15729000 0 0 11356000 7133600 7677400 25309 3119 23092 213275;213276;213277;213278;213279;213280;213281;213282;213283;213284;213285;213286;213287;213288;213289;213290;213291;213292;213293 170395;170396;170397;170398;170399;170400;170401;170402;170403;170404;170405;170406;170407;170408;170409;170410;170411;170412 170403 4732 17 ISESPSEIMESLTK Unmodified 1549.7545 0.75453951 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.29 3.67 4 2 11 1 5 1 1 1 1 1 1 1 1 1 1 1 84.494 82.859 2;3 1.9282E-39 103914 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 197.3 167.04 1758900000 7770500 1621600000 0 0 3085500 8718100 7213300 10699000 7464000 15995000 13151000 16558000 5984400 12606000 28056000 25310 3119 23092 213294;213295;213296;213297;213298;213299;213300;213301;213302;213303;213304;213305;213306;213307;213308;213309;213310 170413;170414;170415;170416;170417;170418;170419;170420;170421;170422;170423;170424;170425;170426;170427;170428;170429;170430 170417 17 ISETAGTRK Unmodified 961.51926 0.51925868 2570 Q15742 NAB2 NGFI-A-binding protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 6.3238 3.3595 2 0.041667 5406 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 84.743 13.028 88342000 34797000 26962000 26584000 0 0 0 0 0 0 0 0 0 0 0 0 25311 2570 23093 213311;213312;213313 170431 170431 1 ISETSSVESVMGIK Unmodified 1465.7334 0.73341013 2550 Q15583 TGIF1 Homeobox protein TGIF1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 72.694 72.387 2 6.2618E-19 83152 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 160.91 109.57 203710000 0 54085000 0 2753400 7873900 12145000 8136400 24880000 11206000 13228000 14829000 16016000 12428000 11094000 15032000 25312 2550 23094 213314;213315;213316;213317;213318;213319;213320;213321;213322;213323;213324;213325;213326 170432;170433;170434;170435;170436;170437;170438;170439;170440;170441;170442;170443;170444;170445;170446 170441 15 ISETSSVESVMGIK Oxidation (M) 1481.7283 0.72832476 2550 Q15583 TGIF1 Homeobox protein TGIF1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 50.118 49.785 2 7.2632E-05 56122 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 83.182 66.157 180190000 0 14859000 0 9874800 12866000 0 14661000 11510000 12059000 12027000 20736000 24710000 15297000 13369000 18216000 25313 2550 23094 213327;213328;213329;213330;213331;213332;213333;213334;213335;213336;213337;213338 170447;170448;170449;170450;170451;170452;170453;170454;170455;170456;170457;170458;170459;170460;170461 170454 4182 13 ISEVLDAGTVDPLTK Unmodified 1556.8298 0.82975336 1623 P50452 SERPINB8 Serpin B8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 77.239 76.571 2 2.6032E-66 93990 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 192.68 158.81 271730000 0 175000000 1428700 23662000 4586500 3891000 5731900 8458100 3558200 8207700 8045300 10612000 7709200 3874800 6966900 25314 1623 23095 213339;213340;213341;213342;213343;213344;213345;213346;213347;213348;213349;213350;213351;213352;213353;213354 170462;170463;170464;170465;170466;170467;170468;170469;170470;170471;170472;170473;170474;170475;170476 170465 15 ISEVVELLK Unmodified 1028.6118 0.61176208 1694 P52701 MSH6 DNA mismatch repair protein Msh6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 77.838 76.712 2 3.8981E-06 96115 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 158.07 45.903 1123900000 57329000 595560000 97891000 12997000 16115000 30349000 24681000 26881000 19309000 43994000 34578000 38960000 28018000 33886000 63358000 25315 1694 23096 213355;213356;213357;213358;213359;213360;213361;213362;213363;213364;213365;213366;213367;213368;213369;213370 170477;170478;170479;170480;170481;170482;170483;170484;170485;170486;170487;170488;170489;170490;170491;170492 170480 16 ISFDEFVYIFQEVK Unmodified 1762.8818 0.88178893 986 P13797 PLS3 Plastin-3 yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 2 2 2 2 101.56 96.588 2;3 0.0002695 120874 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 92.65 83.137 68823000 26319000 42503000 0 0 0 0 0 0 0 0 0 0 0 0 0 25316 986 23097 213371;213372;213373;213374 170493;170494;170495 170495 3 ISFEEFER Unmodified 1055.4924 0.49237523 5245 Q9Y5Q9 GTF3C3 General transcription factor 3C polypeptide 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.6 70.67 2 0.017697 81871 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 65.246 39.075 269440000 0 0 0 14198000 15473000 23820000 17047000 16157000 16731000 34647000 25215000 25145000 22295000 18396000 40316000 25317 5245 23098 213375;213376;213377;213378;213379;213380;213381;213382;213383;213384;213385;213386 170496;170497;170498;170499;170500;170501;170502;170503 170503 8 ISFENLK Unmodified 849.45962 0.45961853 3704 Q93034 CUL5 Cullin-5 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 60.54 55.701 2 0.031432 71396 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.369 28.609 81423000 0 70851000 10572000 0 0 0 0 0 0 0 0 0 0 0 0 25318 3704 23099 213387;213388 170504 170504 1 ISFLENNLEQLTK Unmodified 1547.8195 0.81952302 1328 P33176;O60282;Q12840 KIF5B;KIF5C;KIF5A Kinesin-1 heavy chain;Kinesin heavy chain isoform 5C;Kinesin heavy chain isoform 5A yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 86.651 85.533 2 2.6729E-31 106981 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 208.15 174.23 764350000 81654000 449880000 38510000 2638700 7847200 12593000 8014400 11813000 9649000 29338000 22724000 19831000 6489100 14143000 49228000 25319 1328 23100 213389;213390;213391;213392;213393;213394;213395;213396;213397;213398;213399;213400;213401;213402;213403;213404 170505;170506;170507;170508;170509;170510;170511;170512;170513;170514;170515;170516;170517;170518;170519;170520;170521;170522 170508 18 ISFTGSTTTGK Unmodified 1098.5557 0.55570376 1666 P51649 ALDH5A1 Succinate-semialdehyde dehydrogenase, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 38.962 33.95 2 0.039463 44342 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 49.742 19.13 14964000 0 14964000 0 0 0 0 0 0 0 0 0 0 0 0 0 25320 1666 23101 213405 170523 170523 1 ISFVDCSK Unmodified 954.44807 0.44806757 1325 P32929 CTH Cystathionine gamma-lyase yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 44.515 39.969 2 0.022665 52198 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.265 38.818 232490000 0 226630000 5860600 0 0 0 0 0 0 0 0 0 0 0 0 25321 1325 23102 213406;213407 170524 170524 1 ISGADINSICQESGMLAVR Unmodified 2019.9718 0.9717597 1482 P43686 PSMC4 26S protease regulatory subunit 6B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 80.818 80.898 2 1.1766E-64 93581 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 196.58 175.02 48216000 0 0 0 0 4643300 0 0 0 0 15487000 9403700 11267000 0 0 7415000 25322 1482 23103 213408;213409;213410;213411;213412 170525;170526;170527;170528;170529;170530 170525 6 ISGADINSICQESGMLAVR Oxidation (M) 2035.9667 0.96667432 1482 P43686 PSMC4 26S protease regulatory subunit 6B yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 19 3 3 1 2 1 2 1 2 2 1 1 75.894 75.878 2;3 7.6911E-84 87366 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 175.74 157.15 196200000 0 0 0 12544000 33127000 14523000 5753000 2684300 6867700 26341000 34788000 49753000 0 2563100 7258000 25323 1482 23103 213413;213414;213415;213416;213417;213418;213419;213420;213421;213422;213423;213424;213425;213426;213427;213428;213429;213430;213431 170531;170532;170533;170534;170535;170536;170537;170538;170539 170538 2328 7 ISGAIGPCVSLNSK Unmodified 1401.7286 0.72859953 2536 Q15436 SEC23A Protein transport protein Sec23A yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 65.874 59.554 2 0.00017102 76535 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.6 86.296 132650000 21328000 111320000 0 0 0 0 0 0 0 0 0 0 0 0 0 25324 2536 23104 213432;213433;213434 170540;170541;170542 170540 3 ISGEGRVK Unmodified 844.47667 0.47666558 487 O75369 FLNB Filamin-B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 7.1938 4.1103 2 0.024694 5560 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 107.43 30.583 926450000 728800000 49597000 148050000 0 0 0 0 0 0 0 0 0 0 0 0 25325 487 23105 213435;213436;213437;213438 170543;170544 170543 0 ISGETIFVTAPHEATAGIIGVNRK Unmodified 2480.3387 0.33872212 2040 Q00610 CLTC Clathrin heavy chain 1 yes yes 0 0 1 By MS/MS 10 0 1 1 78.685 78.931 3 3.5544E-77 90787 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 133.58 124.12 21529000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21529000 25326 2040 23106 213439 170545;170546 170545 2 ISGGSVVEMQGDEMTR Oxidation (M) 1710.7553 0.75528456 552 O75874 IDH1 Isocitrate dehydrogenase [NADP] cytoplasmic yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 2 1 2 2 44.994 44.086 2 2.603E-38 54924 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 135.02 129.48 62291000 0 17996000 0 0 0 0 0 0 0 0 8127100 0 0 0 36168000 25327 552 23107 213440;213441;213442;213443;213444;213445;213446;213447 170547;170548;170549;170550;170551;170552;170553;170554 170547 712;713 8 ISGGSVVEMQGDEMTR Unmodified 1694.7604 0.76036994 552 O75874 IDH1 Isocitrate dehydrogenase [NADP] cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 56.811 56.026 2 2.4908E-27 63009 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 128.54 113.72 110530000 0 23276000 0 3848200 0 0 0 0 0 0 12172000 7492900 0 9506300 54232000 25328 552 23107 213448;213449;213450;213451;213452;213453 170555;170556;170557;170558;170559 170556 4 ISGGSVVEMQGDEMTR 2 Oxidation (M) 1726.7502 0.75019918 552 O75874 IDH1 Isocitrate dehydrogenase [NADP] cytoplasmic yes yes 0 2 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 31.924 32.304 2 0.00011802 35075 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 65.179 51.273 28773000 0 0 0 4720000 0 0 0 0 0 0 5782700 5979500 0 0 12291000 25329 552 23107 213454;213455;213456;213457 170560;170561;170562 170561 712;713 3 ISGGYENVPTDDIHMK Unmodified 1774.8196 0.81959938 159 O00469 PLOD2 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 56.59 56.99 3 0.0020308 64037 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.452 39.083 21944000 0 0 0 0 0 0 0 0 0 0 5527900 0 0 4441800 11974000 25330 159 23108 213458;213459;213460 170563 170563 1 ISGHEKAEDIK Unmodified 1225.6303 0.63026569 2788 Q5T9S5 CCDC18 Coiled-coil domain-containing protein 18 yes yes 0 0 1 By MS/MS 10 0 1 1 23.292 22.982 3 0.019361 24538 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 30.889 15.878 2644500 0 0 0 0 2644500 0 0 0 0 0 0 0 0 0 0 25331 2788 23109 213461 170564 170564 1 ISGHSEMAELSLTNISPK Unmodified 1912.9564 0.95642721 2859 Q68DQ2 CRYBG3 Very large A-kinase anchor protein yes yes 0 0 0 By MS/MS 2 0 1 1 80.928 72.797 3 1.5703E-05 95496 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.424 43.874 13226000 13226000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25332 2859 23110 213462 170565 170565 1 ISGLIYEETR Unmodified 1179.6136 0.61355299 1910 P62805 HIST1H4A Histone H4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.969 57.09 2 0.0021049 65090 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 102.62 83.643 212750000 0 0 0 22778000 17209000 13704000 17520000 10268000 11683000 21403000 15055000 24363000 18627000 13767000 26372000 25333 1910 23111 213463;213464;213465;213466;213467;213468;213469;213470;213471;213472;213473;213474 170566;170567;170568;170569;170570;170571;170572;170573;170574;170575;170576 170571 10 ISGLIYEETRGVLK Unmodified 1576.8825 0.88245763 1910 P62805 HIST1H4A Histone H4 yes yes 0 0 1 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 74.831 75.026 3 0.0011482 85968 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.891 44.84 10616000 0 0 0 0 0 0 1298200 1617200 0 2797900 0 0 0 0 4902600 25334 1910 23112 213475;213476;213477;213478 170577 170577 1 ISGNPSLIK Unmodified 927.53893 0.53893149 4377 Q9H334 FOXP1 Forkhead box protein P1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 41.61 37.258 2 0.030391 48685 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.457 28.734 204220000 0 202350000 1872000 0 0 0 0 0 0 0 0 0 0 0 0 25335 4377 23113 213479;213480 170578 170578 1 ISGQNSSVR Unmodified 946.48321 0.48320752 3899 Q96JY0 MAEL Protein maelstrom homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.5086 6.6325 2 0.037292 4293 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 45.335 9.8416 41384000 0 0 0 3027300 3572000 5367100 5082400 4290300 5001200 2168100 3395500 2593700 1977000 2148100 2761100 25336 3899 23114 213481;213482;213483;213484;213485;213486;213487;213488;213489;213490;213491;213492 170579 170579 1 ISGSDARQLYAMK Unmodified 1438.7238 0.7238485 1672 P51812 RPS6KA3 Ribosomal protein S6 kinase alpha-3 yes yes 0 0 1 By MS/MS 2 0 2 2 55.615 47.468 2;3 1.654E-07 65002 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 106.29 68.204 59338000 59338000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25337 1672 23115 213493;213494 170580;170581 170581 2 ISGSDARQLYAMK Oxidation (M) 1454.7188 0.71876312 1672 P51812 RPS6KA3 Ribosomal protein S6 kinase alpha-3 yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 41.24 36.098 3 0.037595 49466 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.189 24.071 46131000 38277000 0 7853300 0 0 0 0 0 0 0 0 0 0 0 0 25338 1672 23115 213495;213496 170582 170582 0 ISGSSTDFQK Unmodified 1068.5088 0.50875357 2788 Q5T9S5 CCDC18 Coiled-coil domain-containing protein 18 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 20.912 21.401 2 0.014809 22293 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 50.473 29.918 5895200 0 0 0 0 0 0 0 0 0 0 0 0 2745500 0 3149800 25339 2788 23116 213497;213498 170583 170583 1 ISGTTALQEALK Unmodified 1230.682 0.68196691 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 68.38 67.58 2 2.8143E-13 86445 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 151.15 97.981 823070000 0 595000000 10734000 13120000 11229000 18494000 15937000 12538000 14192000 18561000 20552000 24638000 14950000 21069000 32055000 25340 1286 23117 213499;213500;213501;213502;213503;213504;213505;213506;213507;213508;213509;213510;213511;213512;213513;213514 170584;170585;170586;170587;170588;170589;170590;170591;170592;170593;170594;170595;170596;170597;170598;170599;170600 170587 15 ISGTVNIR Unmodified 858.49232 0.49231565 1209 P26639 TARS Threonine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.24 2.35 2 19 1 1 1 1 2 2 2 1 2 2 1 2 2 1 32.165 31.801 2 0.013079 33960 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 139.68 28.401 735580000 12972000 36352000 0 5319800 7466400 21362000 21653000 19168000 7095900 31136000 106700000 98590000 31657000 84196000 251910000 25341 1209 23118 213515;213516;213517;213518;213519;213520;213521;213522;213523;213524;213525;213526;213527;213528;213529;213530;213531;213532;213533;213534;213535 170601;170602;170603;170604;170605;170606;170607 170607 6 ISGVATDIQALK Unmodified 1214.6871 0.68705229 2219 Q12979 ABR Active breakpoint cluster region-related protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 66.346 66.496 2 0.0011366 75458 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.363 40.946 44888000 0 0 0 0 1903900 6346400 3609300 2764000 2820000 4680100 6311300 4422600 3441000 0 8590100 25342 2219 23119 213536;213537;213538;213539;213540;213541;213542;213543;213544;213545;213546 170608;170609;170610;170611;170612;170613;170614;170615;170616;170617 170611 10 ISGVGIDQPPYGIFVINQK Unmodified 2044.0993 0.099326699 2075 Q02413 DSG1 Desmoglein-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 90.204 90.276 2;3 1.5496E-06 104737 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 87.363 82.084 340060000 0 0 0 11812000 13862000 21048000 7623700 101610000 15898000 46029000 27780000 38274000 14892000 10837000 30393000 25343 2075 23120 213547;213548;213549;213550;213551;213552;213553;213554;213555;213556;213557;213558;213559;213560;213561;213562;213563;213564;213565;213566;213567;213568;213569;213570 170618;170619;170620;170621;170622;170623;170624;170625;170626;170627;170628;170629;170630;170631;170632;170633 170623 15 ISHGEVLEWQK Unmodified 1324.6776 0.67755023 4230 Q9BXP5 SRRT Serrate RNA effector molecule homolog yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 21 2 1 1 2 2 2 2 2 2 2 1 2 47.512 47.717 2;3 0.00032029 52479 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.483 77.11 324270000 0 0 0 15467000 8734200 22652000 19318000 17313000 18621000 36661000 29442000 43617000 27646000 21725000 63076000 25344 4230 23121 213571;213572;213573;213574;213575;213576;213577;213578;213579;213580;213581;213582;213583;213584;213585;213586;213587;213588;213589;213590;213591 170634;170635;170636;170637;170638;170639;170640;170641;170642;170643;170644;170645 170638 10 ISHLPLVEELR Unmodified 1304.7452 0.74523587 1590 P49736 MCM2 DNA replication licensing factor MCM2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 74.317 74.491 3 0.00092429 85028 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.435 44.493 80013000 0 0 0 0 0 5366600 3915300 5042400 4510200 5764000 6527800 8199900 0 6995300 33691000 25345 1590 23122 213592;213593;213594;213595;213596;213597;213598;213599;213600 170646;170647;170648;170649;170650;170651;170652;170653 170649 8 ISHLSGSGSGDER Unmodified 1300.6008 0.60075648 3997 Q96T37 RBM15 Putative RNA-binding protein 15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 2 9.2836 9.4138 2;3 7.2888E-13 7679 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 112.82 97.941 98664000 0 0 0 8311400 10188000 5544800 11204000 8819600 5901700 0 0 17344000 11302000 7679300 12368000 25346 3997 23123 213601;213602;213603;213604;213605;213606;213607;213608;213609;213610;213611 170654;170655;170656;170657;170658;170659;170660;170661;170662;170663;170664 170662 6 ISHQNYIAYQK Unmodified 1363.6884 0.68844927 3157 Q86UV5 USP48 Ubiquitin carboxyl-terminal hydrolase 48 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.56 3.98 5 4 2 1 2 1 1 1 1 33.822 30.829 2;3 0.0028384 39297 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 69.672 55.11 193490000 119790000 26976000 26161000 0 0 0 4243500 0 0 10591000 0 0 0 5731100 0 25347 3157 23124 213612;213613;213614;213615;213616;213617;213618;213619;213620 170665;170666;170667;170668;170669;170670 170669 5 ISHQRDGLTNAGELESDSGSDK Unmodified 2315.0626 0.062559855 1342 P35226 BMI1 Polycomb complex protein BMI-1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 4 2 2 37.806 33.326 3;4 3.4032E-07 46253 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.09 43.902 19221000 14527000 0 4694000 0 0 0 0 0 0 0 0 0 0 0 0 25348 1342 23125 213621;213622;213623;213624 170671;170672;170673 170671 3 ISHSLNELK Unmodified 1039.5662 0.56620887 4859 Q9UBT7 CTNNAL1 Alpha-catulin yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 34.383 29.533 2 0.03011 37242 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 66.621 34.687 24364000 18674000 0 5690800 0 0 0 0 0 0 0 0 0 0 0 0 25349 4859 23126 213625;213626 170674;170675 170675 1 ISHVSTSSVK Unmodified 1043.5611 0.56112349 276 O15357 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 11.699 11.845 2 0.0051532 10007 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.1 38.166 41582000 0 0 0 1917100 0 3671700 2551600 2466900 0 5567400 0 5801100 5318900 4423900 9863600 25350 276 23127 213627;213628;213629;213630;213631;213632;213633;213634;213635 170676;170677;170678;170679 170677 4 ISHVVVEDTVVSDK Unmodified 1525.7988 0.79878758 3107 Q7Z5K2 WAPAL Wings apart-like protein homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.86 3.49 5 1 16 1 3 2 2 1 1 1 2 1 2 2 1 1 2 48.31 46.853 2;3 8.4917E-30 58956 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 134.61 122.64 393710000 11805000 138620000 137890000 7458800 1599000 2446900 2275400 13997000 2013800 24315000 21705000 0 0 2271300 27315000 25351 3107 23128 213636;213637;213638;213639;213640;213641;213642;213643;213644;213645;213646;213647;213648;213649;213650;213651;213652;213653;213654;213655;213656;213657 170680;170681;170682;170683;170684;170685;170686;170687;170688;170689;170690;170691;170692;170693;170694;170695;170696;170697;170698 170695 18 ISICSSDK Unmodified 908.42733 0.42733213 2314 Q13547 HDAC1 Histone deacetylase 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 21.747 21.998 2 0.028474 22501 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 56.721 24.766 70407000 0 0 0 6525700 6699000 0 9290900 0 0 0 10755000 11838000 9306100 7183700 8808200 25352 2314 23129 213658;213659;213660;213661;213662;213663;213664;213665 170699;170700 170700 2 ISIEGNIAAGK Unmodified 1071.5924 0.59242362 1223 P27707 DCK Deoxycytidine kinase yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 6.17 3.85 2 1 3 2 1 1 1 1 52.534 49.69 2 0.0008681 55683 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 76.679 22.522 624460000 0 585300000 2384200 0 0 0 0 25813000 0 0 0 0 0 10965000 0 25353 1223 23130 213666;213667;213668;213669;213670;213671 170701;170702;170703;170704;170705;170706 170706 4 ISIEGNK Unmodified 759.41267 0.41266834 3993 Q96ST2 IWS1 Protein IWS1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.521 19.722 2 0.0174 20381 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 114.02 46.988 296930000 0 0 0 15232000 18052000 19371000 17985000 12204000 15899000 28446000 39238000 39400000 25164000 29281000 36654000 25354 3993 23131 213672;213673;213674;213675;213676;213677;213678;213679;213680;213681;213682;213683 170707;170708;170709;170710;170711;170712 170707 3 ISIEMNGTLEDQLSHLK Oxidation (M) 1942.967 0.9669919 356 O43707 ACTN4 Alpha-actinin-4 yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 78.34 78.462 3 0.00031581 90383 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.235 45.696 24402000 0 0 0 0 0 3836600 0 0 0 0 0 0 0 0 20566000 25355 356 23132 213684;213685 170713 170713 449 1 ISIENEQLVIGSYSQPSDSWDK Unmodified 2494.1864 0.18636339 2190 Q12792 TWF1 Twinfilin-1 yes yes 0 0 0 By MS/MS By MS/MS 2.67 0.471 1 2 1 2 87.013 82.155 2;3 0.00050287 99628 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 54.223 52.522 18754000 8827500 9926600 0 0 0 0 0 0 0 0 0 0 0 0 0 25356 2190 23133 213686;213687;213688 170714;170715;170716 170714 3 ISIESACEK Unmodified 1035.4907 0.49066067 4664 Q9NVC6 MED17 Mediator of RNA polymerase II transcription subunit 17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.289 31.477 2 0.015068 34236 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 57.708 26.972 104530000 0 0 0 5580500 4890200 6325200 5971300 7751300 5191700 8563000 13500000 13760000 10541000 9230400 13223000 25357 4664 23134 213689;213690;213691;213692;213693;213694;213695;213696;213697;213698;213699;213700 170717;170718;170719 170717 3 ISIGGGSCAISGGYGSR Unmodified 1597.7519 0.75185416 66;58;779 P04259;CON__P02538;P02538;CON__P04259 KRT6B;KRT6A Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 6A no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 57.425 57.231 2 4.4796E-14 65770 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 96.734 85.521 + 78295000 0 0 0 35282000 14768000 0 0 0 0 0 0 0 21701000 6544200 0 25358 779;58;66 23135 213701;213702;213703;213704;213705;213706 170720;170721;170722;170723;170724;170725;170726;170727;170728 170725 9 ISIGNVVK Unmodified 828.5069 0.50690308 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 58.72 52.741 2 0.02179 65989 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 84.244 5.2495 1014900000 446410000 525860000 42677000 0 0 0 0 0 0 0 0 0 0 0 0 25359 5187 23136 213707;213708;213709 170729 170729 1 ISILEPETGK Unmodified 1085.5968 0.5968403 3666 Q92817 EVPL Envoplakin yes yes 0 0 0 By MS/MS By MS/MS 5 3.56 1 1 1 2 1 62.354 57.016 2 0.004742 73175 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.177 50.365 42968000 0 42968000 0 0 0 0 0 0 0 0 0 0 0 0 0 25360 3666 23137 213710;213711;213712 170730;170731;170732;170733;170734 170731 5 ISILTTYNGQK Unmodified 1236.6714 0.67140222 393 O60306 AQR Intron-binding protein aquarius yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS 7.44 3.62 2 1 6 1 2 1 1 1 1 1 1 62.183 60.489 2 0.00033739 80776 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 128.36 55.814 35730000 16888000 1917900 0 1960800 2167800 0 2192800 4186800 0 0 0 0 2817500 3599100 0 25361 393 23138 213713;213714;213715;213716;213717;213718;213719;213720;213721 170735;170736;170737;170738;170739;170740;170741 170738 7 ISINQTPGK Unmodified 956.5291 0.52909508 3573 Q8WWI1 LMO7 LIM domain only protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 28.427 28.639 2 0.00052951 30499 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 132.08 80.067 359770000 0 0 0 21157000 22144000 0 30562000 20195000 24209000 45456000 47487000 40725000 31664000 30954000 45212000 25362 3573 23139 213722;213723;213724;213725;213726;213727;213728;213729;213730;213731;213732 170742;170743;170744;170745;170746;170747;170748;170749;170750;170751;170752;170753 170751 9 ISIPDVDLDLK Unmodified 1226.6758 0.6758189 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 86.537 85.488 2 0.0027921 99060 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.056 41.934 330410000 28430000 235780000 6567300 1356200 3247500 4322600 2731900 4353900 4013400 5748600 5300800 6094300 3568200 5536300 13363000 25363 2172 23140 213733;213734;213735;213736;213737;213738;213739;213740;213741;213742;213743;213744;213745;213746;213747;213748;213749 170754;170755;170756;170757;170758;170759;170760;170761;170762 170757 7 ISIPDVGLHLK Unmodified 1190.7023 0.70230842 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80.216 79.749 3 0.0019483 91552 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.82 49.676 285790000 0 23847000 1201400 4471100 5999800 19461000 12140000 25797000 23149000 25923000 15288000 27215000 16941000 22268000 62085000 25364 2172 23141 213750;213751;213752;213753;213754;213755;213756;213757;213758;213759;213760;213761;213762;213763 170763;170764;170765;170766;170767;170768;170769;170770 170766 8 ISIPVDISDSDMMLNIINSSITTK Oxidation (M) 2622.3132 0.31322016 1570 P49368 CCT3 T-complex protein 1 subunit gamma yes yes 0 1 0 By MS/MS 2 0 1 1 99.627 94.914 2 2.08E-30 117359 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.62 89.232 21740000 0 21740000 0 0 0 0 0 0 0 0 0 0 0 0 0 25365 1570 23142 213764 170771 170771 2512 1 ISIPVDISDSDMMLNIINSSITTK Unmodified 2606.3183 0.31830554 1570 P49368 CCT3 T-complex protein 1 subunit gamma yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 100.71 96.652 3 1.7524E-05 116051 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 49.902 38.602 126070000 0 126070000 0 0 0 0 0 0 0 0 0 0 0 0 0 25366 1570 23142 213765;213766 170772;170773 170773 2 ISISTSGGSFR Unmodified 1110.5669 0.56693715 74 CON__P13647;P13647 KRT5 Keratin, type II cytoskeletal 5 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 50.649 50.802 2 2.0009E-05 57350 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 131.5 91.406 + 3698200000 0 0 0 550980000 202170000 182310000 147990000 814790000 146580000 259890000 279290000 459550000 427030000 136150000 91439000 25367 74 23143 213767;213768;213769;213770;213771;213772;213773;213774;213775;213776;213777;213778 170774;170775;170776;170777;170778;170779;170780;170781;170782;170783;170784;170785;170786;170787;170788;170789;170790;170791 170787 18 ISITEGIER Unmodified 1016.5502 0.55022446 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.843 52.986 2 3.1823E-20 59931 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 174.52 120.96 879630000 0 0 0 40544000 22245000 99905000 36637000 37849000 71928000 80442000 124010000 99778000 96257000 33124000 136920000 25368 1029 23144 213779;213780;213781;213782;213783;213784;213785;213786;213787;213788;213789;213790 170792;170793;170794;170795;170796;170797;170798;170799;170800;170801;170802;170803 170793 12 ISKPGAVSTPVK Unmodified 1182.6972 0.69722304 2136 Q07157 TJP1 Tight junction protein ZO-1 yes yes 0 0 1 By MS/MS 10 0 1 1 28.625 28.232 3 0.035039 30589 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 29.071 11.262 20111000 0 0 0 0 20111000 0 0 0 0 0 0 0 0 0 0 25369 2136 23145 213791 170804 170804 1 ISLADIAQK Unmodified 957.5495 0.54949617 308 O43242 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.657 63.697 2 0.00038819 72799 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 147.06 39.386 344360000 0 0 0 23471000 37350000 45202000 0 0 0 63404000 73619000 69564000 0 0 31748000 25370 308 23146 213792;213793;213794;213795;213796;213797;213798;213799;213800;213801;213802;213803 170805;170806;170807;170808;170809;170810;170811;170812;170813;170814;170815;170816 170806 12 ISLAPTDVK Unmodified 942.5386 0.53859714 3576 Q8WWM7 ATXN2L Ataxin-2-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.62 2.87 1 2 13 1 2 1 1 1 1 1 1 1 2 1 1 1 1 50.013 49.154 2 0.003237 55508 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 90.709 50.441 657060000 467150 183670000 0 28354000 31197000 35746000 32870000 25758000 32927000 39110000 59578000 51228000 36243000 40318000 59589000 25371 3576 23147 213804;213805;213806;213807;213808;213809;213810;213811;213812;213813;213814;213815;213816;213817;213818;213819 170817;170818;170819;170820;170821;170822;170823;170824;170825;170826;170827;170828;170829 170826 6 ISLDQIDLLSTK Unmodified 1344.75 0.75004648 1583 P49643 PRIM2 DNA primase large subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 86.919 85.802 2 2.4836E-15 106617 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 150.04 95.061 440660000 8806300 286450000 4366400 3023000 5884800 10777000 6634700 8488000 10061000 16848000 16539000 16812000 9064300 12840000 24057000 25372 1583 23148 213820;213821;213822;213823;213824;213825;213826;213827;213828;213829;213830;213831;213832;213833;213834;213835 170830;170831;170832;170833;170834;170835;170836;170837;170838;170839;170840;170841;170842;170843 170834 14 ISLDYHEIEGSK Unmodified 1389.6776 0.67760981 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.72 2 13 1 1 1 1 2 1 1 1 1 1 1 1 1 1 60.639 60.079 2;3 9.8573E-09 68568 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 113.24 90.662 444930000 0 14759000 7814300 16355000 25643000 37140000 29940000 40763000 27665000 35029000 43692000 47925000 40729000 36473000 41003000 25373 3023 23149 213836;213837;213838;213839;213840;213841;213842;213843;213844;213845;213846;213847;213848;213849;213850 170844;170845;170846;170847;170848;170849;170850;170851;170852;170853;170854;170855;170856;170857 170855 11 ISLEDIQAFEK Unmodified 1291.666 0.66598249 3596 Q8WXX5 DNAJC9 DnaJ homolog subfamily C member 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 83.209 82.56 2 4.1961E-05 94850 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 116.52 74.327 644490000 0 409250000 7623500 6542600 12124000 15934000 11644000 13114000 13824000 20161000 19015000 19937000 24307000 25025000 45987000 25374 3596 23150 213851;213852;213853;213854;213855;213856;213857;213858;213859;213860;213861;213862;213863;213864;213865;213866 170858;170859;170860;170861;170862;170863;170864;170865;170866;170867;170868;170869;170870;170871;170872;170873;170874 170870 17 ISLEEQLK Unmodified 958.53351 0.53351176 2510 Q15276 RABEP1 Rab GTPase-binding effector protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 57.754 51.771 2 0.0062755 66717 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 139.68 65.264 125930000 16202000 107460000 2266800 0 0 0 0 0 0 0 0 0 0 0 0 25375 2510 23151 213867;213868;213869 170875;170876 170876 2 ISLEYSELQDK Unmodified 1323.6558 0.65581174 463 O75150 RNF40 E3 ubiquitin-protein ligase BRE1B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.21 64.302 2 1.469E-05 73946 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 135.55 112.81 304460000 0 0 0 18113000 15429000 17184000 22780000 22145000 14469000 30849000 30963000 31421000 29653000 25529000 45922000 25376 463 23152 213870;213871;213872;213873;213874;213875;213876;213877;213878;213879;213880;213881 170877;170878;170879;170880;170881;170882;170883;170884;170885;170886;170887;170888;170889 170889 13 ISLGLPVGAVINCADNTGAK Unmodified 1969.0303 0.030260856 1913 P62829 RPL23 60S ribosomal protein L23 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 88.095 88.165 2 2.6396E-20 102202 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 110.44 105.26 331360000 0 0 0 2928500 13492000 16433000 9585400 21767000 17069000 48364000 32867000 40305000 10214000 28036000 90299000 25377 1913 23153 213882;213883;213884;213885;213886;213887;213888;213889;213890;213891;213892;213893 170890;170891;170892;170893;170894;170895;170896;170897;170898;170899;170900;170901 170891 12 ISLGMPVGPNAHK Oxidation (M) 1335.6969 0.69690547 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 20 1 2 2 2 2 2 1 1 2 2 1 2 41.883 42.077 2;3 6.7851E-09 46155 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 110.53 91.555 1282700000 0 0 0 8792200 122810000 133660000 152990000 103750000 127730000 22825000 17656000 286430000 158060000 13659000 134320000 25378 2290 23154 213894;213895;213896;213897;213898;213899;213900;213901;213902;213903;213904;213905;213906;213907;213908;213909;213910;213911;213912;213913 170902;170903;170904;170905;170906;170907;170908;170909;170910;170911;170912;170913;170914;170915 170912 3738 7 ISLGMPVGPNAHK Unmodified 1319.702 0.70199085 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 59.496 59.605 2;3 0.00067609 68626 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 90.108 62.366 2083800000 0 0 0 91142000 107550000 127610000 139640000 185620000 105420000 165760000 194380000 257350000 185550000 181150000 342670000 25379 2290 23154 213914;213915;213916;213917;213918;213919;213920;213921;213922;213923;213924;213925;213926;213927;213928;213929;213930;213931;213932;213933;213934;213935;213936;213937 170916;170917;170918;170919;170920;170921;170922;170923;170924;170925;170926;170927;170928;170929;170930;170931;170932;170933;170934;170935;170936 170935 14 ISLHPIEDNPIEEISVLSPEDLEAIK Unmodified 2899.5066 0.50663489 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 4 2 3 3 98.827 93.947 3 1.5129E-14 117411 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.275 59.741 615290000 406890000 208400000 0 0 0 0 0 0 0 0 0 0 0 0 0 25380 4634 23155 213938;213939;213940;213941;213942;213943 170937;170938;170939;170940;170941;170942;170943 170943 7 ISLLNSEK Unmodified 902.5073 0.50729701 4807 Q9P260 KIAA1468 LisH domain and HEAT repeat-containing protein KIAA1468 yes yes 0 0 0 By MS/MS 2 0 1 1 49.629 43.922 2 0.0035989 56645 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 149.4 50.983 2685100000 0 2685100000 0 0 0 0 0 0 0 0 0 0 0 0 0 25381 4807 23156 213944 170944;170945 170944 2 ISLLPNDEDSLPPLLVASGEK Unmodified 2206.1733 0.1732795 3086 Q7Z3T8 ZFYVE16 Zinc finger FYVE domain-containing protein 16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 5 3.56 2 2 2 4 1 1 96.584 93.945 2;3 1.9277E-29 115421 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 151.44 131.06 135430000 0 131110000 0 0 0 0 0 0 0 1749300 0 0 0 0 2572000 25382 3086 23157 213945;213946;213947;213948;213949;213950 170946;170947;170948;170949 170946 4 ISLLTDSLLK Unmodified 1101.6645 0.66452593 2808 Q5VT06 CEP350 Centrosome-associated protein 350 yes yes 0 0 0 By MS/MS 2 0 1 1 90.884 82.753 2 0.012025 107438 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.325 46.386 6010000 6010000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25383 2808 23158 213951 170950 170950 1 ISLNDVSK Unmodified 874.476 0.47599688 4969 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 40.223 40.14 2 0.011957 43252 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.738 13.08 18899000 0 0 0 1875000 4950700 0 0 0 0 0 0 0 0 0 12074000 25384 4969 23159 213952;213953;213954 170951 170951 1 ISLNSLCYGDMDK Unmodified 1514.6745 0.67451505 458 O75131 CPNE3 Copine-3 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 78.561 74.484 2 3.7938E-08 92761 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.35 96.712 287810000 0 287810000 0 0 0 0 0 0 0 0 0 0 0 0 0 25385 458 23160 213955;213956 170952 170952 1 ISLPGQMAGTPITPLK Oxidation (M) 1638.9015 0.90147851 4458 Q9H8Y8 GORASP2 Golgi reassembly-stacking protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.64 77.698 2 3.6576E-05 89497 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 76.522 67.568 150660000 0 0 0 9229500 8489200 11511000 10708000 11256000 10895000 15833000 12588000 15901000 13798000 9977600 20472000 25386 4458 23161 213957;213958;213959;213960;213961;213962;213963;213964;213965;213966;213967;213968 170953;170954;170955;170956;170957;170958;170959;170960;170961;170962;170963;170964 170955 5896 12 ISLPGQMAGTPITPLK Unmodified 1622.9066 0.90656389 4458 Q9H8Y8 GORASP2 Golgi reassembly-stacking protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 83.081 83.144 2 0.00010535 95402 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 88.441 75.013 42122000 0 0 0 0 1619200 2902000 0 4821700 0 4203200 0 0 0 5892700 22684000 25387 4458 23161 213969;213970;213971;213972;213973;213974 170965;170966;170967;170968;170969;170970 170969 6 ISLPIEDYFNK Unmodified 1337.6867 0.68671794 4837 Q9UBD5 ORC3 Origin recognition complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 88.213 87.738 2 0.00032275 101471 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.247 74.382 117640000 0 52920000 1707500 0 3025700 6009900 3190300 5270500 4311100 10799000 5361100 5425000 3281700 4530000 11812000 25388 4837 23162 213975;213976;213977;213978;213979;213980;213981;213982;213983;213984;213985;213986;213987 170971;170972;170973;170974;170975;170976;170977;170978;170979;170980;170981 170975 9 ISLPLPNFSSLNLR Unmodified 1569.8879 0.88787736 870 P08670 VIM Vimentin yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 95.853 95.99 2 0.004327 111381 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 99.215 89.262 12179000 0 0 0 0 0 0 0 0 0 2267700 0 0 0 0 9911100 25389 870 23163 213988;213989 170982 170982 0 ISLQAIQQLVR Unmodified 1267.7612 0.76122028 533 O75694 NUP155 Nuclear pore complex protein Nup155 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 88.239 88.369 2 0.00027892 102318 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 92.838 70.601 9953500 0 0 0 0 0 0 0 0 0 3250800 0 0 0 0 6702700 25390 533 23164 213990;213991 170983;170984 170984 2 ISLQQELSR Unmodified 1072.5877 0.58767259 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By MS/MS 10 0 1 1 55.618 56.242 2 0.026416 63114 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.157 37.861 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25391 2291 23165 213992 170985 170985 1 ISLQVDNSLITK Unmodified 1329.7504 0.75038083 2800 Q5THK1 PRR14L Protein PRR14L yes yes 0 0 0 By MS/MS 2 0 1 1 79.498 74.762 2 0.012511 93178 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.894 25.345 24871000 0 24871000 0 0 0 0 0 0 0 0 0 0 0 0 0 25392 2800 23166 213993 170986 170986 1 ISLSNESNK Unmodified 990.49819 0.49818889 828 P06737 PYGL Glycogen phosphorylase, liver form yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 22.841 18.885 2 0.00089681 24836 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 143.89 96.038 33101000 0 33101000 0 0 0 0 0 0 0 0 0 0 0 0 0 25393 828 23167 213994;213995 170987;170988;170989 170988 3 ISLSTLQQQLGQPEK Unmodified 1668.9046 0.90464964 5245 Q9Y5Q9 GTF3C3 General transcription factor 3C polypeptide 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.138 79.197 2 8.2763E-27 91481 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 158.04 123.15 255090000 0 0 0 6746700 15955000 24665000 12808000 12665000 17834000 33361000 26139000 24381000 18241000 21607000 40693000 25394 5245 23168 213996;213997;213998;213999;214000;214001;214002;214003;214004;214005;214006;214007 170990;170991;170992;170993;170994;170995;170996;170997;170998;170999;171000;171001 170991 12 ISLVDLAGSERADSTGAK Unmodified 1788.9218 0.92175626 396 O60333;Q12756 KIF1B;KIF1A Kinesin-like protein KIF1B;Kinesin-like protein KIF1A yes no 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 75.081 71.261 3 0.0020268 89281 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 46.621 39.11 53889000 0 47402000 6487300 0 0 0 0 0 0 0 0 0 0 0 0 25395 396 23169 214008;214009;214010 171002;171003;171004 171002 3 ISLVQRGDDADQIEPPK Unmodified 1879.964 0.96395543 3294 Q8IZE3 SCYL3 Protein-associating with the carboxyl-terminal domain of ezrin yes yes 0 0 1 By MS/MS 2 0 1 1 61.965 58.203 3 0.012288 72411 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 35.329 25.914 4150300 0 0 4150300 0 0 0 0 0 0 0 0 0 0 0 0 25396 3294 23170 214011 171005 171005 1 ISMPDFDLHLK Oxidation (M) 1330.6591 0.65912298 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.41 2.1 2 25 1 1 1 3 3 2 3 3 2 2 2 1 1 2 72.164 71.953 2;3 0.0085711 82038 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.391 50.549 436590000 0 35522000 25385000 17361000 18733000 39923000 7177700 47164000 38232000 36140000 33270000 54514000 5920400 5636200 71615000 25397 2172 23171 214012;214013;214014;214015;214016;214017;214018;214019;214020;214021;214022;214023;214024;214025;214026;214027;214028;214029;214030;214031;214032;214033;214034;214035;214036;214037;214038 171006;171007;171008;171009;171010;171011;171012 171009 3510 2 ISMPDFDLHLK Unmodified 1314.6642 0.66420836 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 88.199 82.794 3 0.0081578 104337 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 46.592 41.494 129390000 28954000 100440000 0 0 0 0 0 0 0 0 0 0 0 0 0 25398 2172 23171 214039;214040;214041 171013;171014 171013 2 ISMPDFDLNLK Oxidation (M) 1307.6431 0.64313856 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 77.201 77.339 2 0.0032154 89078 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 60.398 14.396 50799000 0 0 0 0 0 0 11596000 0 11372000 10328000 0 0 0 17503000 0 25399 2172 23172 214042;214043;214044;214045;214046 171015;171016;171017;171018;171019 171017 3511 5 ISMPDIDFNLK Oxidation (M) 1307.6431 0.64313856 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 2 1 1 1 1 1 1 76.763 76.837 2 0.00095718 88550 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 72.643 18.227 102180000 0 0 0 4387400 4940900 0 7180800 8972100 18976000 8986100 9157600 11400000 8800400 6613800 12763000 25400 2172 23173 214047;214048;214049;214050;214051;214052;214053;214054;214055;214056;214057;214058;214059 171020;171021;171022;171023;171024;171025;171026;171027;171028;171029;171030;171031;171032 171027 3512 13 ISMPDIDFNLK Unmodified 1291.6482 0.64822394 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 3 6 1 1 1 1 1 1 1 1 1 88.206 86.582 2 4.9954E-09 108030 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.6 35.005 84037000 5872500 56830000 796680 0 0 0 0 3148500 3174200 2403400 0 2955300 0 1896900 6960000 25401 2172 23173 214060;214061;214062;214063;214064;214065;214066;214067;214068 171033;171034;171035;171036;171037 171033 5 ISMPDIDLNLTGPK Unmodified 1512.7858 0.78578005 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 2 1 6 2 1 1 1 1 1 1 1 88.437 87.332 2 0.00041704 101367 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 71.085 58.871 160070000 0 121860000 1156500 0 1462100 0 0 2152700 2767800 5038500 7805400 0 0 0 17821000 25402 2172 23174 214069;214070;214071;214072;214073;214074;214075;214076;214077 171038;171039;171040;171041;171042;171043 171038 5 ISMPDIDLNLTGPK Oxidation (M) 1528.7807 0.78069468 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 77.869 77.96 2 4.5662E-14 89673 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 114.86 93.863 111550000 0 0 0 4825700 0 8046400 8793000 9638400 9384100 9536100 10640000 15826000 11490000 11224000 12150000 25403 2172 23174 214078;214079;214080;214081;214082;214083;214084;214085;214086;214087;214088 171044;171045;171046;171047;171048;171049 171045 3513 6 ISMPDLDLHLK Oxidation (M) 1296.6748 0.67477304 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 6 4 2 2 1 1 1 1 70.995 69.011 3 0.0051278 78311 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 43.68 33.308 70882000 0 31723000 9033300 0 0 9512900 0 0 0 0 0 0 20614000 0 0 25404 2172 23175 214089;214090;214091;214092 171050;171051;171052 171052 3514 3 ISMPDLDLHLK Unmodified 1280.6799 0.67985842 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS 8 3.46 3 9 1 1 1 1 1 1 1 1 1 1 1 1 82.544 81.366 3 0.018742 102495 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 36.847 29.237 94898000 14593000 38076000 1541300 0 0 3418400 2679000 3052900 3172400 3533600 3061800 0 1558500 4417000 15794000 25405 2172 23175 214093;214094;214095;214096;214097;214098;214099;214100;214101;214102;214103;214104 171053;171054;171055 171053 3 ISMPDLDLNLK Unmodified 1257.6639 0.663874 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.1 3.37 6 1 22 1 3 3 2 2 2 2 2 2 2 2 2 2 2 86.134 85.234 2 0.00043519 105761 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.07 0 1310400000 46030000 806450000 10474000 0 25019000 24208000 22733000 49431000 37795000 37501000 33462000 43633000 23136000 43011000 107480000 25406 2172 23176 214105;214106;214107;214108;214109;214110;214111;214112;214113;214114;214115;214116;214117;214118;214119;214120;214121;214122;214123;214124;214125;214126;214127;214128;214129;214130;214131;214132;214133 171056;171057;171058;171059;171060;171061;171062;171063;171064;171065;171066;171067;171068 171057 13 ISMPDVDFNLK Oxidation (M) 1293.6275 0.6274885 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.25 2.26 1 1 18 2 1 1 2 2 1 1 2 2 2 1 1 2 72.169 71.843 2 0.00035509 82297 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 81.95 59.864 203670000 0 21094000 0 6515000 6333500 15232000 18219000 11022000 8444000 22963000 22305000 28126000 10672000 8618100 24123000 25407 2172 23177 214134;214135;214136;214137;214138;214139;214140;214141;214142;214143;214144;214145;214146;214147;214148;214149;214150;214151;214152;214153 171069;171070;171071;171072;171073;171074;171075;171076;171077;171078 171069 3515 9 ISMPDVDFNLK Unmodified 1277.6326 0.63257388 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84.025 83.559 2 0.0020604 97134 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 81.338 66.664 265780000 0 137110000 1757100 912150 3066500 4597400 4619700 13049000 12618000 12282000 9708000 15588000 8752600 12353000 29365000 25408 2172 23177 214154;214155;214156;214157;214158;214159;214160;214161;214162;214163;214164;214165;214166;214167 171079;171080;171081;171082;171083;171084;171085 171083 5 ISMPDVDLHLK Unmodified 1266.6642 0.66420836 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.66 2.95 4 1 24 3 2 2 2 2 2 2 2 2 2 2 2 2 2 77.778 77.214 2;3 1.9284E-05 88629 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 125.56 83.687 1593900000 0 728730000 51225000 10356000 18231000 47237000 28624000 70959000 62747000 53913000 51942000 83711000 55353000 80412000 250460000 25409 2172 23178 214168;214169;214170;214171;214172;214173;214174;214175;214176;214177;214178;214179;214180;214181;214182;214183;214184;214185;214186;214187;214188;214189;214190;214191;214192;214193;214194;214195;214196 171086;171087;171088;171089;171090;171091;171092;171093;171094;171095;171096;171097;171098;171099;171100;171101;171102;171103;171104;171105;171106;171107;171108 171094 19 ISMPDVDLHLK Oxidation (M) 1282.6591 0.65912298 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 2 1 2 2 2 1 61.37 60.232 3 0.0028445 68127 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.56 57.815 1190000000 44642000 161910000 78395000 52691000 51291000 118840000 0 78582000 152630000 154390000 171240000 125370000 0 0 0 25410 2172 23178 214197;214198;214199;214200;214201;214202;214203;214204;214205;214206;214207;214208;214209;214210;214211 171109;171110;171111;171112;171113;171114;171115;171116;171117;171118 171109 3516 5 ISMPDVDLHMK Unmodified 1284.6206 0.62062898 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 3 9 1 1 1 1 1 1 1 1 1 1 1 1 74.471 73.299 3 0.0086488 92599 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 53.569 43.881 170210000 10768000 74030000 5919100 0 0 7881900 2965800 0 4952800 6940700 9143300 11126000 7370400 7409900 21706000 25411 2172 23179 214212;214213;214214;214215;214216;214217;214218;214219;214220;214221;214222;214223 171119;171120;171121;171122;171123 171120 5 ISMPDVDLHVK Unmodified 1252.6486 0.64855829 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 73.106 72.34 2;3 0.00268 91591 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.069 59.595 321710000 0 129640000 16458000 5813000 6820800 11911000 9402400 18044000 11432000 14411000 13882000 20177000 14172000 17342000 32206000 25412 2172 23180 214224;214225;214226;214227;214228;214229;214230;214231;214232;214233;214234;214235;214236;214237;214238 171124;171125;171126;171127;171128;171129;171130;171131;171132;171133;171134;171135;171136;171137 171127 14 ISMPDVDLHVK Oxidation (M) 1268.6435 0.64347291 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 4 8 2 2 1 1 1 1 2 1 1 53.488 51.366 3 0.00072618 58301 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 67.153 51.951 238940000 12362000 72247000 0 0 11142000 0 0 13321000 13506000 0 21438000 46253000 31950000 0 16724000 25413 2172 23180 214239;214240;214241;214242;214243;214244;214245;214246;214247;214248;214249;214250 171138;171139;171140;171141;171142;171143;171144;171145 171145 3517 8 ISMPDVDLNLK Unmodified 1243.6482 0.64822394 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 82.701 81.292 2 1.0563E-06 100869 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.86 78.548 313940000 9125900 209500000 2487000 2555800 9619700 10362000 7149600 13840000 10085000 0 14097000 0 10478000 14640000 0 25414 2172 23181 214251;214252;214253;214254;214255;214256;214257;214258;214259;214260;214261;214262;214263;214264;214265 171146;171147;171148;171149;171150;171151;171152;171153;171154;171155;171156;171157;171158;171159 171149 14 ISMPDVDLNLK Oxidation (M) 1259.6431 0.64313856 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 67.65 67.731 2 0.0053039 77538 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 52.49 30.253 59726000 0 0 0 0 6041300 5993100 9499000 10113000 8175500 0 0 12304000 0 7600600 0 25415 2172 23181 214266;214267;214268;214269;214270;214271;214272 171160;171161;171162;171163;171164 171164 3518 2 ISMPDVGLNLK Unmodified 1185.6427 0.64274463 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 81.466 81.154 2 0.00035549 93478 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 103.55 77.987 346000000 0 99412000 0 4546100 9996600 13780000 12791000 27378000 15349000 22537000 19596000 27856000 18618000 22308000 51833000 25416 2172 23182 214273;214274;214275;214276;214277;214278;214279;214280;214281;214282;214283;214284;214285 171165;171166;171167;171168;171169;171170;171171;171172;171173;171174;171175;171176;171177 171169 13 ISMPDVGLNLK Oxidation (M) 1201.6377 0.63765925 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.714 65.8 2 0.00194 76177 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 65.347 29.729 119200000 0 0 0 5398400 6768000 6475300 11171000 8970000 8107600 9847400 10504000 15035000 10989000 9981900 15947000 25417 2172 23182 214286;214287;214288;214289;214290;214291;214292;214293;214294;214295;214296;214297 171178;171179;171180;171181;171182;171183;171184;171185;171186;171187;171188;171189 171189 3519 9 ISMPDVNLNLK Unmodified 1242.6642 0.66420836 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 81.15 80.849 2 0.00045884 99903 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.2 73.627 245700000 0 73740000 0 0 7771400 10017000 9866000 17655000 13423000 14505000 12269000 18032000 13454000 15447000 39520000 25418 2172 23183 214298;214299;214300;214301;214302;214303;214304;214305;214306;214307;214308;214309 171190;171191;171192;171193;171194;171195;171196;171197 171192 6 ISMPDVNLNLK Oxidation (M) 1258.6591 0.65912298 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 65.211 65.378 2 0.0082176 74935 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 66.692 48.252 29926000 0 0 0 0 0 0 0 13308000 0 0 0 0 16618000 0 0 25419 2172 23183 214310;214311;214312 171198;171199 171199 3520 1 ISMPEIDLNLK Unmodified 1271.6795 0.67952407 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 85.986 85.676 2 2.4143E-05 106446 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.31 100.29 162260000 0 103770000 0 0 3251100 3710300 2346000 5144000 4830800 6480000 5194400 4994400 2549200 5752300 14242000 25420 2172 23184 214313;214314;214315;214316;214317;214318;214319;214320;214321;214322;214323;214324 171200;171201;171202;171203 171201 3 ISMPEVDLNLK Oxidation (M) 1273.6588 0.65878863 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 2 1 1 1 69.256 69.389 2 1.6767E-05 79698 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 120.99 7.2822 143340000 0 0 0 0 10197000 10595000 0 13732000 15099000 28207000 16283000 28679000 0 0 20551000 25421 2172 23185 214325;214326;214327;214328;214329;214330;214331;214332;214333 171204;171205;171206;171207;171208;171209;171210;171211;171212;171213;171214 171213 3521 10 ISMPEVDLNLK Unmodified 1257.6639 0.663874 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 82.611 82.049 2 0.00059756 94190 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 97.565 6.4781 539370000 0 414320000 0 0 0 10042000 11538000 17976000 15114000 0 0 0 0 23642000 46745000 25422 2172 23185 214334;214335;214336;214337;214338;214339;214340 171215;171216;171217;171218;171219 171219 3 ISMPGFK Oxidation (M) 794.39966 0.39966081 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 1 0 By MS/MS By matching 10 0 2 1 1 28.864 28.949 2 0.034262 31157 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 60.358 60.358 30220000 0 0 0 0 0 0 14227000 0 15992000 0 0 0 0 0 0 25423 2172 23186 214341;214342 171220 171220 1 ISMQCFDFTDSK Unmodified 1477.6218 0.62175119 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.692 76.75 2 0.00025415 88675 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 83.397 57.738 68018000 0 0 0 1610700 3445300 4351700 3296200 5440300 3311800 6776400 8404800 7548800 7747200 5553700 10531000 25424 3023 23187 214343;214344;214345;214346;214347;214348;214349;214350;214351;214352;214353;214354 171221;171222;171223;171224;171225;171226;171227;171228;171229;171230;171231;171232 171227 12 ISMQDVDLSLGSPK Oxidation (M) 1504.7443 0.74430917 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.42 2 1 1 24 2 2 2 2 2 2 2 2 2 2 2 2 2 63.929 63.606 2 1.3552E-16 71914 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 121.02 102.28 300570000 0 47446000 0 17946000 14842000 16014000 22435000 21221000 18035000 19956000 20441000 28897000 29206000 19088000 25048000 25425 2172 23188 214355;214356;214357;214358;214359;214360;214361;214362;214363;214364;214365;214366;214367;214368;214369;214370;214371;214372;214373;214374;214375;214376;214377;214378;214379;214380 171233;171234;171235;171236;171237;171238;171239;171240;171241;171242;171243;171244;171245;171246;171247;171248;171249;171250;171251;171252;171253;171254;171255;171256 171239 3522 15 ISMQDVDLSLGSPK Unmodified 1488.7494 0.74939455 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 79.132 78.609 2 2.3472E-61 91384 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 184.03 140.52 464440000 0 178960000 0 10696000 9945400 13284000 17116000 28301000 30302000 22487000 19866000 25426000 25037000 30427000 52590000 25426 2172 23188 214381;214382;214383;214384;214385;214386;214387;214388;214389;214390;214391;214392;214393;214394 171257;171258;171259;171260;171261;171262;171263;171264;171265;171266;171267;171268;171269;171270;171271 171267 15 ISMQELEELRK Oxidation (M) 1390.7126 0.71261511 4126 Q9BSJ2 TUBGCP2 Gamma-tubulin complex component 2 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 49.729 49.05 3 8.4374E-05 55232 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 88.441 78.754 162690000 18614000 0 0 0 17240000 25014000 0 0 22331000 22637000 14658000 14357000 13829000 0 14014000 25427 4126 23189 214395;214396;214397;214398;214399;214400;214401;214402;214403 171272;171273;171274;171275;171276 171273 5610 5 ISMQELEELRK Unmodified 1374.7177 0.71770049 4126 Q9BSJ2 TUBGCP2 Gamma-tubulin complex component 2 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 2 1 1 2 2 1 1 49.966 49.013 3 0.00051339 91430 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.184 74.227 194150000 44609000 18769000 0 423540 32251000 0 1805500 16740000 0 22147000 19636000 0 14990000 22774000 0 25428 4126 23189 214404;214405;214406;214407;214408;214409;214410;214411;214412;214413;214414;214415;214416 171277;171278;171279;171280;171281;171282 171280 6 ISMSEVDLNVAAPK Unmodified 1472.7545 0.75447993 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 76.406 76.426 2 5.7422E-08 88527 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 118.28 103.31 245450000 0 0 0 12697000 14982000 22508000 19549000 27899000 20544000 29782000 0 47008000 24005000 26472000 0 25429 2172 23190 214417;214418;214419;214420;214421;214422;214423;214424;214425;214426 171283;171284;171285;171286;171287;171288;171289;171290;171291;171292;171293;171294 171291 11 ISMSEVDLNVAAPK Oxidation (M) 1488.7494 0.74939455 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 61.691 61.773 2 0.017589 70422 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 47.894 30.03 143960000 0 0 0 12842000 0 0 21682000 16356000 15978000 17307000 14874000 0 24659000 20260000 0 25430 2172 23190 214427;214428;214429;214430;214431;214432;214433;214434 171295;171296 171296 3523 0 ISMSHEEEPLGTAGPLALAR Oxidation (M) 2094.0416 0.041553824 5243 Q9Y5P6 GMPPB Mannose-1-phosphate guanyltransferase beta yes yes 0 1 0 By MS/MS 10 0 1 1 73.255 73.239 3 0.00034808 84423 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 42.64 35.322 10056000 0 0 0 0 0 10056000 0 0 0 0 0 0 0 0 0 25431 5243 23191 214435 171297 171297 6643 1 ISMSHEEEPLGTAGPLALAR Unmodified 2078.0466 0.046639202 5243 Q9Y5P6 GMPPB Mannose-1-phosphate guanyltransferase beta yes yes 0 0 0 By MS/MS 10 0 1 1 77.439 77.703 3 0.0013321 89356 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.915 33.586 13109000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13109000 25432 5243 23191 214436 171298 171298 1 ISNAQLQTELVEILK Unmodified 1697.9564 0.95635086 3704 Q93034 CUL5 Cullin-5 yes yes 0 0 0 By MS/MS 2 0 1 1 98.108 93.334 2 0.004573 115534 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.996 46.041 53566000 0 53566000 0 0 0 0 0 0 0 0 0 0 0 0 0 25433 3704 23192 214437 171299 171299 1 ISNCVQQHAWDR Unmodified 1512.6892 0.68919433 4433 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 32.87 33.165 3 0.035243 35788 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 31.526 26.247 27555000 0 0 0 0 3389300 0 0 0 2931000 0 0 8065500 6206200 0 6963000 25434 4433 23193 214438;214439;214440;214441;214442 171300 171300 1 ISNDPSPGYNIEQMAK Oxidation (M) 1778.8145 0.814514 4549 Q9NPF4 OSGEP Probable tRNA N6-adenosine threonylcarbamoyltransferase yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 50.881 45.559 2 6.4575E-31 58893 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.71 111.85 29927000 0 29927000 0 0 0 0 0 0 0 0 0 0 0 0 0 25435 4549 23194 214443;214444 171301 171301 5962 1 ISNDPSPGYNIEQMAK Unmodified 1762.8196 0.81959938 4549 Q9NPF4 OSGEP Probable tRNA N6-adenosine threonylcarbamoyltransferase yes yes 0 0 0 By MS/MS 2 0 1 1 69.198 63.329 2 5.1578E-11 80547 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.02 81.688 178980000 0 178980000 0 0 0 0 0 0 0 0 0 0 0 0 0 25436 4549 23194 214445 171302 171302 1 ISNFLLEK Unmodified 962.54368 0.54368251 2215 Q12965 MYO1E Unconventional myosin-Ie no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 67.668 66.26 2 0.0025531 85685 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.87 62.086 1607100000 555260000 642350000 107760000 21163000 19898000 25524000 21312000 20239000 20378000 25388000 0 49866000 26253000 28248000 43456000 25437 2215 23195 214446;214447;214448;214449;214450;214451;214452;214453;214454;214455;214456;214457;214458;214459;214460 171303;171304;171305;171306;171307;171308;171309;171310;171311;171312;171313;171314;171315;171316 171306 7 ISNINFEGSR Unmodified 1135.5622 0.56218613 2763 Q5SXM2 SNAPC4 snRNA-activating protein complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 44.982 45.212 2 0.0019928 49822 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 87.149 67.362 75248000 0 0 0 5331500 0 0 7243400 5624600 5449100 9333700 0 11666000 8651400 8401600 13547000 25438 2763 23196 214461;214462;214463;214464;214465;214466;214467;214468;214469;214470 171317;171318;171319;171320;171321;171322;171323;171324;171325;171326;171327;171328 171324 12 ISNITVEQR Unmodified 1058.572 0.57202253 102 CON__Q7Z3Y9;Q7Z3Y9 KRT26 Keratin, type I cytoskeletal 26 yes no 0 0 0 By MS/MS By matching By MS/MS By matching 10 0 4 1 1 1 1 26.293 26.444 2 0.012783 28250 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 60.788 11.429 + 6318000 0 0 0 2200700 0 1438900 0 0 942230 0 0 1736100 0 0 0 25439 102 23197 214471;214472;214473;214474 171329;171330 171330 2 ISNPSAFSIVPR Unmodified 1286.6983 0.69828568 3241 Q8IWI9 MGA MAX gene-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 74.944 74.963 2 0.0073886 86638 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 50.194 37.405 30389000 0 0 0 2433800 2959900 0 3637100 3204600 2832000 4544600 4360600 0 3797300 2618600 0 25440 3241 23198 214475;214476;214477;214478;214479;214480;214481;214482;214483 171331;171332;171333;171334;171335;171336;171337;171338 171338 8 ISNPTEFQNHEK Unmodified 1442.679 0.6790068 4233 Q9BXS6 NUSAP1 Nucleolar and spindle-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 29.451 29.062 3 8.329E-11 36571 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 125.97 119.94 260900000 0 25781000 24567000 13579000 15738000 19516000 18293000 11822000 11966000 17179000 20793000 22933000 21293000 11899000 25541000 25441 4233 23199 214484;214485;214486;214487;214488;214489;214490;214491;214492;214493;214494;214495;214496;214497;214498 171339;171340;171341;171342;171343;171344;171345;171346;171347 171343 8 ISNQVDLSNVCAQYR Unmodified 1765.8417 0.8417318 533 O75694 NUP155 Nuclear pore complex protein Nup155 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.219 64.31 2 1.8325E-83 72875 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 186.02 162.41 160130000 0 0 0 7016900 5931500 15537000 11734000 9838500 7742100 14710000 11383000 23169000 15066000 15710000 22289000 25442 533 23200 214499;214500;214501;214502;214503;214504;214505;214506;214507;214508;214509;214510 171348;171349;171350;171351;171352;171353;171354;171355;171356;171357;171358;171359;171360 171356 13 ISNSATYSGSVAPANSALGQTQPSDQDTLVQR Unmodified 3262.5702 0.57019121 3865 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.912 69.989 3 9.0757E-21 80421 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 54.326 48.231 206210000 0 0 0 7793600 15589000 17607000 13753000 12315000 9501300 25740000 20915000 20424000 13233000 18649000 30696000 25443 3865 23201 214511;214512;214513;214514;214515;214516;214517;214518;214519;214520;214521;214522 171361;171362;171363;171364;171365;171366;171367;171368;171369;171370;171371;171372;171373;171374 171371 14 ISNSDLSGSAR Unmodified 1105.5364 0.53636531 1406 P39880 CUX1 Homeobox protein cut-like 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 19.589 19.683 2 0.00025931 19799 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 91.584 19.892 35203000 0 0 0 5776000 10744000 0 0 0 10797000 0 0 0 0 0 7886600 25444 1406 23202 214523;214524;214525;214526 171375;171376 171375 2 ISNSMLDK Oxidation (M) 922.44298 0.44298219 3013 Q6ZSZ6 TSHZ1 Teashirt homolog 1 yes yes 0 1 0 By MS/MS 2 0 1 1 33.852 29.209 1 0.010969 38264 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.138 14.961 17682000 0 17682000 0 0 0 0 0 0 0 0 0 0 0 0 0 25445 3013 23203 214527 171377 171377 4618 0 ISNTAISISDHTALAQFCK Unmodified 2076.031 0.030989138 1134 P22102 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.38 3.91 5 1 7 3 2 1 1 1 1 1 1 1 1 77.729 76.123 3 1.8333E-84 96505 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 166.91 152.31 441500000 290770000 58671000 21779000 0 0 7952100 0 3179200 0 8787900 7118400 10671000 0 7451600 25117000 25446 1134 23204 214528;214529;214530;214531;214532;214533;214534;214535;214536;214537;214538;214539;214540 171378;171379;171380;171381;171382;171383;171384;171385;171386;171387;171388;171389;171390;171391 171385 14 ISNYGWDQSDK Unmodified 1311.5731 0.57314474 4497 Q9HB71 CACYBP Calcyclin-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 41.626 40.471 2 8.663E-17 52380 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 173.37 161.15 2133600000 124920000 1257500000 13644000 28226000 24274000 97068000 37299000 34931000 22178000 80640000 81434000 76755000 46914000 63436000 144390000 25447 4497 23205 214541;214542;214543;214544;214545;214546;214547;214548;214549;214550;214551;214552;214553;214554;214555;214556 171392;171393;171394;171395;171396;171397;171398;171399;171400;171401;171402;171403;171404;171405;171406;171407;171408 171400 11 ISPEQHWDFTAEDLK Unmodified 1814.8475 0.84752869 1491 P45985 MAP2K4 Dual specificity mitogen-activated protein kinase kinase 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 75.798 74.863 3 0.0002821 93664 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 53.169 41.146 178500000 0 104650000 20173000 0 0 0 0 6997400 0 9804600 0 0 4000900 6583200 26289000 25448 1491 23206 214557;214558;214559;214560;214561;214562;214563 171409;171410;171411;171412;171413;171414;171415;171416 171410 8 ISPLQFR Unmodified 859.49159 0.49158736 1721 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.84 60.945 2 0.023018 69648 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 103.28 60.218 728390000 0 0 0 45114000 40469000 52364000 49341000 49746000 36327000 68452000 74682000 99278000 67952000 54162000 90501000 25449 1721 23207 214564;214565;214566;214567;214568;214569;214570;214571;214572;214573;214574;214575 171417;171418;171419;171420;171421;171422 171417 6 ISPLSSPCSSPLQGTPASSLVSK Unmodified 2299.173 0.17296193 2406 Q14432 PDE3A cGMP-inhibited 3',5'-cyclic phosphodiesterase A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.64 1.67 1 21 1 2 2 1 1 1 2 2 2 2 2 2 2 81.301 80.98 2;3 6.4964E-72 93889 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 125.5 112.94 353000000 8715900 0 0 13071000 23769000 23964000 5587500 18361000 25897000 35068000 43655000 47498000 28277000 24486000 54650000 25450 2406 23208 214576;214577;214578;214579;214580;214581;214582;214583;214584;214585;214586;214587;214588;214589;214590;214591;214592;214593;214594;214595;214596;214597 171423;171424;171425;171426;171427;171428;171429;171430;171431;171432;171433;171434;171435;171436;171437;171438;171439;171440 171425 18 ISPMLSPFISSVVR Oxidation (M) 1547.8381 0.83814998 4731 Q9NXR7 BRE BRCA1-A complex subunit BRE yes yes 0 1 0 By MS/MS 10 0 1 1 87.762 87.912 2 0.0045655 101758 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.084 27.194 2236000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2236000 25451 4731 23209 214598 171441 171441 6109 1 ISPQIQLSGQTEQTQK Unmodified 1784.9268 0.92684164 4841 Q9UBG3 CRNN Cornulin yes yes 0 0 0 By MS/MS 10 0 1 1 52.208 52.372 2 0.00010622 59234 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 95.417 71.566 6394100 0 0 0 0 0 0 0 6394100 0 0 0 0 0 0 0 25452 4841 23210 214599 171442 171442 1 ISPQTVWDYVEK Unmodified 1463.7296 0.72964538 3631 Q92576 PHF3 PHD finger protein 3 yes yes 0 0 0 By MS/MS 10 0 1 1 84.579 84.758 2 0.0074755 97932 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.09 20.92 4281800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4281800 25453 3631 23211 214600 171443 171443 1 ISPTFADAYSNMGNTLK Oxidation (M) 1844.8615 0.86146419 271 O15294 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 67.876 68.025 2 1.3236E-13 77987 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 91.858 78.195 192970000 0 0 0 0 17170000 22229000 17223000 16913000 15542000 18429000 20594000 25206000 0 18192000 21468000 25454 271 23212 214601;214602;214603;214604;214605;214606;214607;214608;214609;214610 171444;171445;171446;171447;171448;171449;171450;171451;171452;171453;171454 171451 358 11 ISPWLLR Unmodified 883.52797 0.52797287 1179 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 76.569 76.659 2 0.046966 87831 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.672 24.986 36061000 0 0 0 0 1521200 2875300 2128200 2133200 0 3277800 4605400 0 4052800 3743500 11724000 25455 1179 23213 214611;214612;214613;214614;214615;214616;214617;214618;214619 171455 171455 1 ISQALASK Unmodified 816.47052 0.47051757 4425 Q9H6T3 RPAP3 RNA polymerase II-associated protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.931 15.102 2 0.030483 13688 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 55.503 16.53 106960000 0 0 0 6500600 3500200 5735500 7945900 6547300 4629300 10679000 17474000 8771800 10061000 10131000 14985000 25456 4425 23214 214620;214621;214622;214623;214624;214625;214626;214627;214628;214629;214630;214631 171456;171457;171458;171459 171458 4 ISQDLALIAR Unmodified 1098.6397 0.63970816 2759 Q5SW79;Q96L14 CEP170;CEP170P1 Centrosomal protein of 170 kDa;Cep170-like protein yes no 0 0 0 By MS/MS 10 0 1 1 67.774 67.898 2 0.0019071 77839 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 96.936 60.809 43418000 0 0 0 0 0 0 0 0 0 43418000 0 0 0 0 0 25457 2759 23215 214632 171460 171460 1 ISQENEIGK Unmodified 1016.5138 0.51383895 448 O60934 NBN Nibrin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 16.682 15.955 2 0.0010762 19439 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.28 49.16 218770000 9944100 41910000 0 12015000 9428600 12914000 16202000 12168000 0 0 0 44576000 26679000 32929000 0 25458 448 23216 214633;214634;214635;214636;214637;214638;214639;214640;214641;214642 171461;171462;171463;171464;171465 171463 4 ISQETEQRCESLNTR Unmodified 1849.8588 0.85883843 1695 P52732 KIF11 Kinesin-like protein KIF11 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 22.628 22.759 3 0.0019599 23958 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 45.864 28.375 39934000 0 0 0 2195500 1903800 3560500 3186300 3226800 3186700 4705800 0 8432300 4099500 5436300 0 25459 1695 23217 214643;214644;214645;214646;214647;214648;214649;214650;214651;214652 171466;171467;171468;171469;171470;171471;171472;171473 171470 8 ISQGNISK Unmodified 845.46068 0.46068117 578 O76094 SRP72 Signal recognition particle subunit SRP72 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.43 3.02 1 2 11 1 2 1 1 1 1 1 1 1 1 1 1 1 11.184 10.51 2 0.01026 9623 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 80.229 8.2798 354050000 537140 152870000 0 16982000 9091100 16472000 17760000 17864000 14266000 22550000 0 24100000 20849000 14653000 26053000 25460 578 23218 214653;214654;214655;214656;214657;214658;214659;214660;214661;214662;214663;214664;214665;214666 171474;171475;171476;171477;171478;171479;171480;171481 171481 3 ISQGPYK Unmodified 791.41775 0.41775372 136 O00267 SUPT5H Transcription elongation factor SPT5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 8.0834 8.1818 2 0.040879 5953 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 68.398 8.7892 43960000 0 0 0 3240500 2257800 2714200 3554800 3078300 3194300 4397200 11736000 6058700 3727800 0 0 25461 136 23219 214667;214668;214669;214670;214671;214672;214673;214674;214675;214676 171482 171482 1 ISQLEMAR Oxidation (M) 962.48552 0.48551571 1198 P26038 MSN Moesin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 2 1 1 1 1 21.06 21.552 2 0.0037313 21189 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 117.4 45.449 75238000 0 0 0 0 0 0 0 0 0 0 21293000 14856000 5687000 12186000 21216000 25462 1198 23220 214677;214678;214679;214680;214681;214682 171483;171484;171485;171486;171487;171488 171486 1737 5 ISQLEMAR Unmodified 946.4906 0.49060109 1198 P26038 MSN Moesin yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 36.704 37.088 2 0.0071701 39827 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 123.69 67.143 58400000 0 0 0 0 0 0 0 0 0 0 35538000 0 0 22862000 0 25463 1198 23220 214683;214684 171489;171490 171490 1 ISQLEQDLASMR Unmodified 1389.6922 0.69221402 3964 Q96R06 SPAG5 Sperm-associated antigen 5 yes yes 0 0 0 By MS/MS 10 0 1 1 74.951 75.262 2 0.0052138 86360 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.015 65.761 5640800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5640800 25464 3964 23221 214685 171491 171491 0 ISQPEDSRQPNNVIR Unmodified 1751.8915 0.89145919 3092 Q7Z422 SZRD1 SUZ domain-containing protein 1 yes yes 0 0 1 By MS/MS 10 0 1 1 31.977 32.693 3 7.5651E-05 34716 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.472 44.014 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25465 3092 23222 214686 171492 171492 1 ISQPSDINTFSLVEQLPGK Unmodified 2072.079 0.078985188 178 O00750 PIK3C2B Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.33 2 2 11 4 1 1 1 1 1 1 1 1 1 1 1 88.287 87.283 2;3 9.6886E-18 107976 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.06 91.682 287280000 0 253170000 0 0 1747000 2641900 2137700 2413200 1912400 5253700 3307700 3448300 2323000 3079200 5851400 25466 178 23223 214687;214688;214689;214690;214691;214692;214693;214694;214695;214696;214697;214698;214699;214700;214701 171493;171494;171495;171496;171497;171498;171499;171500;171501 171495 9 ISQQALSAYAQAEK Unmodified 1506.7678 0.7678218 3302 Q8N0Z6 TTC5 Tetratricopeptide repeat protein 5 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 60.354 55.015 2 0.00054204 70694 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.273 67.26 51226000 0 51226000 0 0 0 0 0 0 0 0 0 0 0 0 0 25467 3302 23224 214702;214703 171502 171502 1 ISQQQEQLLMK Oxidation (M) 1360.7021 0.70205043 2778 Q5T5Y3 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 yes yes 0 1 0 By MS/MS 2 0 1 1 43.411 38.263 2 0.0077556 49732 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.016 47.044 13689000 0 13689000 0 0 0 0 0 0 0 0 0 0 0 0 0 25468 2778 23225 214704 171503 171503 4417 1 ISQRDENGELR Unmodified 1315.648 0.64804102 275 O15355 PPM1G Protein phosphatase 1G yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 13.866 14.028 3 4.4584E-05 12487 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 99.522 55.213 389160000 0 0 0 22938000 21256000 17752000 16669000 14747000 0 33211000 49087000 52774000 40395000 38919000 81406000 25469 275 23226 214705;214706;214707;214708;214709;214710;214711;214712;214713;214714;214715 171504;171505;171506;171507;171508;171509;171510;171511;171512 171508 7 ISQSAPVK Unmodified 828.47052 0.47051757 1516 P46937 YAP1 Transcriptional coactivator YAP1 yes yes 0 0 0 By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 13.75 13.952 2 0.019937 12790 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 63.21 16.216 165960000 0 0 0 2576200 1645900 0 0 7909800 6826900 14790000 24673000 30740000 11702000 21075000 44023000 25470 1516 23227 214716;214717;214718;214719;214720;214721;214722;214723;214724;214725 171513;171514;171515 171514 1 ISQSELFDNK Unmodified 1179.5772 0.57716749 2529 Q15398 DLGAP5 Disks large-associated protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 6.206 2.9656 2;3 0.011304 54166 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.941 54.374 75317000 0 75317000 0 0 0 0 0 0 0 0 0 0 0 0 0 25471 2529 23228 214726;214727;214728 171516;171517;171518 171518 3 ISQSGDFLR Unmodified 1021.5193 0.51925868 640 O95302 FKBP9 Peptidyl-prolyl cis-trans isomerase FKBP9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 43.516 43.857 2 0.0039609 48494 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 99.139 29.14 71073000 0 0 0 0 4422400 0 0 0 0 0 15957000 12480000 10337000 7017800 20858000 25472 640 23229 214729;214730;214731;214732;214733;214734;214735 171519;171520;171521;171522;171523 171522 5 ISQSNYIPTQQDVLR Unmodified 1760.9057 0.90571227 872 P08754 GNAI3 Guanine nucleotide-binding protein G(k) subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 68.345 68.415 2 0.0047917 78643 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 42.976 33.133 70572000 0 0 0 3980100 5033700 4867800 4673200 6610000 0 6082400 8000900 8105200 6760700 7133800 9324200 25473 872 23230 214736;214737;214738;214739;214740;214741;214742;214743;214744;214745;214746 171524;171525;171526;171527;171528;171529;171530 171524 7 ISQSQPVR Unmodified 913.49813 0.49812931 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.196 11.31 2 0.0087129 10319 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 85.265 24.907 62330000 0 0 0 5089100 3824200 5943900 4828900 4610800 4677600 6871800 0 6071700 7649300 6961800 5800400 25474 619 23231 214747;214748;214749;214750;214751;214752;214753;214754;214755;214756;214757 171531;171532;171533;171534;171535;171536;171537;171538;171539 171536 7 ISQSTFNNPRPGQLGR Unmodified 1770.9125 0.91252898 2551 Q15596 NCOA2 Nuclear receptor coactivator 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 44.629 44.912 3 0.00072376 50364 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 54.501 33.562 79824000 0 0 0 0 0 0 7468100 11210000 7504500 10999000 15122000 0 0 12758000 14763000 25475 2551 23232 214758;214759;214760;214761;214762;214763;214764 171540;171541;171542;171543;171544;171545;171546;171547;171548 171540 9 ISQTAPEWTAQAMEAQMAQ Unmodified 2090.9401 0.94012522 4137 Q9BT78 COPS4 COP9 signalosome complex subunit 4 yes yes 0 0 0 By MS/MS 2 0 2 2 86.115 81.341 2;3 1.5773E-09 101101 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.167 91.263 85122000 0 85122000 0 0 0 0 0 0 0 0 0 0 0 0 0 25476 4137 23233 214765;214766 171549;171550 171549 2 ISQTYQQQYGR Unmodified 1370.6579 0.65787742 887 P09525 ANXA4 Annexin A4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.867 27.068 2 4.6391E-21 28625 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 169.44 128.56 118220000 0 0 0 15829000 5185800 7369800 6017800 9010900 4679300 9434900 11106000 17349000 9213100 9758700 13267000 25477 887 23234 214767;214768;214769;214770;214771;214772;214773;214774;214775;214776;214777;214778 171551;171552;171553;171554;171555;171556;171557;171558;171559;171560;171561;171562;171563 171560 13 ISREPEPAAGPQAEESATVSAPAPMSPTR Oxidation (M) 2949.4138 0.41381391 4210 Q9BWG6 SCNM1 Sodium channel modifier 1 yes yes 0 1 1 By matching By matching By MS/MS 10 0 3 1 1 1 52.239 52.134 3 6.0018E-12 59210 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 46.847 40.342 24645000 0 0 0 7244200 0 0 0 0 6365500 11035000 0 0 0 0 0 25478 4210 23235 214779;214780;214781 171564 171564 5688 1 ISREPEPAAGPQAEESATVSAPAPMSPTR Unmodified 2933.4189 0.41889929 4210 Q9BWG6 SCNM1 Sodium channel modifier 1 yes yes 0 0 1 By MS/MS By matching By matching By matching 10 0 4 1 1 1 1 59.738 59.692 3 0.0037957 68502 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 8.6425 2.9823 13751000 0 0 0 0 3165700 2925200 3866700 0 0 0 0 0 0 3793300 0 25479 4210 23235 214782;214783;214784;214785 171565 171565 1 ISRLDAELVK Unmodified 1142.6659 0.66592292 4784 Q9NZZ3 CHMP5 Charged multivesicular body protein 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.72 2 13 1 1 1 1 1 1 1 1 1 1 1 1 1 2 48.646 48.019 3 0.003676 53022 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.721 14.997 2274900000 1522400000 0 63154000 27426000 24167000 27097000 39058000 28047000 28092000 58250000 98872000 106640000 33929000 72116000 145700000 25480 4784 23236 214786;214787;214788;214789;214790;214791;214792;214793;214794;214795;214796;214797;214798;214799;214800 171566;171567;171568;171569;171570;171571;171572;171573;171574;171575 171574 4 ISRPGDSDDSR Unmodified 1203.548 0.54799262 1008 P14866 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 7.9506 8.0393 3 0.0013746 6481 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 85.845 68.036 238570000 0 0 0 0 26061000 50928000 0 0 37970000 0 0 0 62005000 61605000 0 25481 1008 23237 214801;214802;214803;214804;214805 171576;171577;171578;171579;171580 171579 1 ISRPHPSTAESK Unmodified 1308.6786 0.67861287 3029 Q71RC2 LARP4 La-related protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 7.8159 8.0167 3 0.0033638 6677 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 49.774 38.254 55067000 0 0 0 0 0 2280400 0 0 2004300 6859800 20645000 7430500 5408400 4734200 5704800 25482 3029 23238 214806;214807;214808;214809;214810;214811;214812;214813 171581;171582;171583;171584;171585;171586 171586 6 ISSASDCINSMVEGSELK Unmodified 1925.871 0.8710426 5056 Q9UPR0 PLCL2 Inactive phospholipase C-like protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 77.992 73.217 2 1.2786E-07 91282 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 135.04 103.03 30152000 0 30152000 0 0 0 0 0 0 0 0 0 0 0 0 0 25483 5056 23239 214814 171587 171587 1 ISSCSDESSNSNSSRK Unmodified 1743.733 0.73296922 472 O75179 ANKRD17 Ankyrin repeat domain-containing protein 17 yes yes 0 0 1 By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 5.6514 5.7688 3 6.3746E-06 3641 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 77.746 69.362 55993000 0 0 0 6566700 3027000 5181200 620200 7640700 6222500 2532400 5204100 4996700 5424100 3094500 5482900 25484 472 23240 214815;214816;214817;214818;214819;214820;214821;214822;214823;214824;214825;214826 171588;171589 171589 2 ISSDLDGHPVPK Unmodified 1263.6459 0.64591575 1249 P29401 TKT Transketolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.08 3.82 1 24 5 18 12 12 6 2 1 1 1 2 1 1 2 2 1 2 2 38.203 35.826 2;3 6.0985E-07 46954 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 123.63 84.477 22158000000 2120700000 14991000000 1202800000 32020000 31432000 35914000 49029000 40941000 28055000 38099000 693850000 507910000 39847000 504130000 1842300000 25485 1249 23241 214827;214828;214829;214830;214831;214832;214833;214834;214835;214836;214837;214838;214839;214840;214841;214842;214843;214844;214845;214846;214847;214848;214849;214850;214851;214852;214853;214854;214855;214856;214857;214858;214859;214860;214861;214862;214863;214864;214865;214866;214867;214868;214869;214870;214871;214872;214873;214874 171590;171591;171592;171593;171594;171595;171596;171597;171598;171599;171600;171601;171602;171603;171604;171605;171606;171607;171608;171609;171610;171611;171612;171613;171614;171615;171616;171617;171618;171619;171620;171621;171622;171623;171624;171625;171626;171627;171628;171629;171630;171631;171632;171633;171634;171635 171621 44 ISSDQLSSEHLSSAVEQK Unmodified 1943.9436 0.94361392 16 A3KMH1 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 0 0 0 By MS/MS 2 0 1 1 56.015 50.2 3 0.040646 64779 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 14.437 7.8671 16941000 0 16941000 0 0 0 0 0 0 0 0 0 0 0 0 0 25486 16 23242 214875 171636 171636 1 ISSEAHREVMK Unmodified 1285.6449 0.6448699 972 P12955 PEPD Xaa-Pro dipeptidase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 14.229 11.006 3 0.0092784 16087 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.875 19.269 465020000 440500000 8776100 15750000 0 0 0 0 0 0 0 0 0 0 0 0 25487 972 23243 214876;214877;214878 171637 171637 1 ISSEAHREVMK Oxidation (M) 1301.6398 0.63978452 972 P12955 PEPD Xaa-Pro dipeptidase yes yes 0 1 1 By matching By MS/MS 2 0 2 1 1 7.4802 4.6139 3 0.015292 6441 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 72.848 57.218 587620000 542280000 0 45341000 0 0 0 0 0 0 0 0 0 0 0 0 25488 972 23243 214879;214880 171638 171638 1288 0 ISSEPVPGEIIAVR Unmodified 1465.814 0.81404372 3722 Q969R5 L3MBTL2 Lethal(3)malignant brain tumor-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 75.867 75.956 2 0.00071212 87682 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 64.224 59.925 66694000 0 0 0 0 5212300 10746000 5603100 6780800 7215100 8672700 0 0 6389900 6450200 9623800 25489 3722 23244 214881;214882;214883;214884;214885;214886;214887;214888;214889 171639;171640;171641 171639 3 ISSFEQR Unmodified 865.42938 0.42938104 3134 Q86TC9 MYPN Myopalladin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 20.392 20.611 2 0.023176 21053 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 102.8 48.036 438010000 0 0 0 0 29724000 0 40078000 36249000 36384000 53190000 61953000 0 55530000 51562000 73346000 25490 3134 23245 214890;214891;214892;214893;214894;214895;214896;214897;214898;214899 171642;171643;171644;171645;171646;171647 171644 5 ISSILSSLTSVMK Oxidation (M) 1380.7534 0.75341729 2810 Q5VT52 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.717 82.779 2 7.6773E-13 95349 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 127.51 78.454 171240000 0 0 0 4175700 7603700 12055000 10398000 15782000 10385000 14776000 12301000 21119000 15837000 15555000 31251000 25491 2810 23246 214900;214901;214902;214903;214904;214905;214906;214907;214908;214909;214910;214911 171648;171649;171650;171651;171652;171653;171654;171655;171656;171657;171658;171659;171660 171651 4442 13 ISSILSSLTSVMK Unmodified 1364.7585 0.75850267 2810 Q5VT52 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 0 0 0 By MS/MS 10 0 1 1 92.403 92.541 2 0.0020186 107164 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.598 33.116 5896600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5896600 25492 2810 23246 214912 171661 171661 1 ISSIQSIVPALEIANAHR Unmodified 1918.0636 0.063609895 930 P10809 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 86.993 87.139 3 0.00089405 100764 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.754 38.224 44704000 0 0 0 0 0 2981900 1539100 3562200 2973500 7045000 3672800 2475100 0 1806300 18648000 25493 930 23247 214913;214914;214915;214916;214917;214918;214919;214920;214921 171662;171663;171664 171664 2 ISSIQSIVPALEIANAHRK Unmodified 2046.1586 0.15857291 930 P10809 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 82.06 82.201 4 0.0039235 94616 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 28.333 19.514 83048000 0 0 0 0 0 0 0 0 0 0 0 0 2110400 0 80937000 25494 930 23248 214922;214923 171665 171665 1 ISSLEASGSPEPGPELLAEELQHR Unmodified 2545.266 0.26601069 2938 Q6P5Z2 PKN3 Serine/threonine-protein kinase N3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 2 1 1 1 85.362 85.497 3 2.0084E-09 99039 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 59.539 53.376 57689000 0 0 0 0 0 4091500 0 0 8013400 10074000 7065200 9375900 0 3187900 15881000 25495 2938 23249 214924;214925;214926;214927;214928;214929;214930;214931 171666;171667;171668;171669;171670;171671;171672;171673;171674;171675 171667 10 ISSLLEEQFQQGK Unmodified 1505.7726 0.77257283 1877 P62241 RPS8 40S ribosomal protein S8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.85 3.52 8 1 24 2 5 2 2 2 2 2 2 2 2 2 2 2 2 2 70.844 70.041 2;3 6.2467E-107 80444 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 261.03 223.52 5601100000 72026000 3550400000 175570000 96373000 98191000 114460000 96724000 110530000 102660000 161400000 191930000 222150000 180830000 192320000 235530000 25496 1877 23250 214932;214933;214934;214935;214936;214937;214938;214939;214940;214941;214942;214943;214944;214945;214946;214947;214948;214949;214950;214951;214952;214953;214954;214955;214956;214957;214958;214959;214960;214961;214962;214963;214964 171676;171677;171678;171679;171680;171681;171682;171683;171684;171685;171686;171687;171688;171689;171690;171691;171692;171693;171694;171695;171696;171697;171698;171699;171700;171701;171702;171703;171704;171705;171706 171693 26 ISSLSFTLEEEEEGGEEEEEAAMYEEEMEREEITTK Unmodified 4211.7934 0.79337153 2403 Q14320 FAM50A Protein FAM50A yes yes 0 0 1 By MS/MS 2 0 1 1 94.072 85.941 3 6.4429E-30 111200 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.903 69.013 20664000 20664000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25497 2403 23251 214965 171707 171707 1 ISSLSFTLEEEEEGGEEEEEAAMYEEEMEREEITTK Oxidation (M) 4227.7883 0.78828616 2403 Q14320 FAM50A Protein FAM50A yes yes 0 1 1 By MS/MS 2 0 1 1 93.015 84.884 3 6.1909E-66 109824 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 92.343 90.254 19264000 19264000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25498 2403 23251 214966 171708 171708 3939 0 ISSLTSEIMK Oxidation (M) 1123.5795 0.57947567 2855 Q68CZ6 HAUS3 HAUS augmin-like complex subunit 3 yes yes 0 1 0 By MS/MS 2 0 1 1 52.801 47.028 2 0.025234 60976 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 59.35 29.877 6680800 0 6680800 0 0 0 0 0 0 0 0 0 0 0 0 0 25499 2855 23252 214967 171709 171709 1 ISSLTSEIMK Unmodified 1107.5846 0.58456105 2855 Q68CZ6 HAUS3 HAUS augmin-like complex subunit 3 yes yes 0 0 0 By MS/MS 2 0 1 1 69.454 63.585 2 0.04273 80929 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 53.965 13.862 55177000 0 55177000 0 0 0 0 0 0 0 0 0 0 0 0 0 25500 2855 23252 214968 171710 171710 1 ISSMVVMENVGQQK Unmodified 1548.764 0.76399875 1496 P46063 RECQL ATP-dependent DNA helicase Q1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 63.886 64.166 2 1.0452E-12 73418 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 107.55 91.925 48849000 0 0 0 0 0 5734200 0 5646300 0 0 8325000 5322100 3766500 0 20054000 25501 1496 23253 214969;214970;214971;214972;214973;214974;214975 171711;171712;171713;171714;171715;171716 171714 6 ISSNFSSIIAEK Unmodified 1294.6769 0.67688153 3709 Q93074 MED12 Mediator of RNA polymerase II transcription subunit 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 72.591 71.434 2 0.0016706 89556 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.344 50.104 121230000 25610000 31747000 2115500 2526300 3501300 5275100 3724400 5903000 2918800 5235300 6180500 6666300 5154200 5480700 9191400 25502 3709 23254 214976;214977;214978;214979;214980;214981;214982;214983;214984;214985;214986;214987;214988;214989;214990;214991 171717;171718;171719;171720;171721;171722;171723;171724;171725;171726;171727;171728 171718 12 ISSNPNPVVQMSVGHK Unmodified 1692.8617 0.86173896 4 A0FGR8 ESYT2 Extended synaptotagmin-2 yes yes 0 0 0 By matching By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 55.997 52.593 3 0.0021189 59463 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 36.226 24.457 18572000 0 10889000 2769100 0 4913400 0 0 0 0 0 0 0 0 0 0 25503 4 23255 214992;214993;214994 171729;171730;171731;171732 171731 4 ISSPLFNTK Unmodified 1005.5495 0.54949617 271 O15294 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 56.843 57.025 2 0.0037281 66121 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 96.027 30.351 217130000 0 0 0 15203000 0 20312000 17687000 13023000 11977000 19340000 23221000 21191000 23556000 20952000 30666000 25504 271 23256 214995;214996;214997;214998;214999;215000;215001;215002;215003;215004;215005 171733;171734;171735;171736;171737;171738;171739;171740;171741;171742 171741 10 ISSPQVEEGDSR Unmodified 1302.6052 0.60517315 1275 P30291 WEE1 Wee1-like protein kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.368 26.567 2 0.0017523 27086 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 71.03 52.719 91866000 0 0 0 5118700 6204700 7602500 6818900 6953800 5153000 9106000 10385000 9794400 10119000 7127000 7483000 25505 1275 23257 215006;215007;215008;215009;215010;215011;215012;215013;215014;215015;215016;215017 171743;171744;171745;171746;171747;171748;171749;171750;171751;171752;171753 171749 10 ISSPTETER Unmodified 1018.4931 0.49310351 1314 P31949 S100A11 Protein S100-A11;Protein S100-A11, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.887 16.057 2 0.0010919 16038 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 143.12 89.566 1571900000 0 0 0 118370000 38264000 65984000 62279000 63283000 58004000 87311000 187120000 195330000 116100000 211900000 367960000 25506 1314 23258 215018;215019;215020;215021;215022;215023;215024;215025;215026;215027;215028;215029 171754;171755;171756;171757;171758;171759;171760;171761;171762;171763 171762 10 ISSSLPSGNNNGK Unmodified 1273.6262 0.62624295 3775 Q96CB8 INTS12 Integrator complex subunit 12 yes yes 0 0 0 By MS/MS 2 0 1 1 25.438 21.235 2 0.014014 28126 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.841 36.548 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25507 3775 23259 215030 171764 171764 1 ISSSNQTPQILVK Unmodified 1413.7827 0.78274359 4077 Q99996 AKAP9 A-kinase anchor protein 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 53.154 52.655 2 0.0044734 67799 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.689 63.8 103980000 0 56691000 0 0 0 8294600 0 0 0 0 7409100 10102000 6306900 5849200 9325200 25508 4077 23260 215031;215032;215033;215034;215035;215036;215037 171765;171766;171767;171768;171769 171765 5 ISSSSFSR Unmodified 869.4243 0.42429566 67 CON__P05787;P05787 KRT8 Keratin, type II cytoskeletal 8 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 1 1 1 2 1 1 2 21.817 22.086 2 0.0067631 22144 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 121.99 21.801 + 6755500000 0 0 0 388150000 479260000 536660000 860530000 308750000 506380000 749310000 688430000 886620000 37560000 588980000 724860000 25509 67 23261 215038;215039;215040;215041;215042;215043;215044;215045;215046;215047;215048;215049;215050;215051 171770;171771;171772;171773;171774;171775;171776;171777;171778;171779;171780 171773 3 ISSVLAGGSCR Unmodified 1105.555 0.55499226 56;70 CON__P02533;P02533;CON__P08779;P08779 KRT14;KRT16 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.53 33.714 2 4.1961E-05 37849 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 116.52 92.487 + 719210000 0 0 0 240160000 50300000 25249000 17631000 35181000 23433000 44780000 40449000 45524000 153920000 26366000 16227000 25510 56;70 23262 215052;215053;215054;215055;215056;215057;215058;215059;215060;215061;215062;215063 171781;171782;171783;171784;171785;171786;171787;171788;171789;171790;171791;171792;171793;171794 171792 11 ISSVPNSLSK Unmodified 1030.5659 0.56587452 2830 Q5VZ89 DENND4C DENN domain-containing protein 4C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35.339 34.667 2 0.0024533 38547 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 83.456 25.748 468070000 5438400 131200000 0 18839000 15666000 27186000 23712000 23546000 19337000 30143000 35155000 39972000 35209000 21794000 40872000 25511 2830 23263 215064;215065;215066;215067;215068;215069;215070;215071;215072;215073;215074;215075;215076;215077 171795;171796;171797;171798;171799;171800 171795 4 ISTCAPSTLHITQNTEQELHSPTVK Unmodified 2791.3811 0.38105722 3566 Q8WVV4 POF1B Protein POF1B yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 65.576 65.314 4 1.6285E-08 75484 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 50.827 44.029 12418000 0 0 0 7928500 0 0 0 0 4490000 0 0 0 0 0 0 25512 3566 23264 215078;215079 171801 171801 1 ISTEDINK Unmodified 918.46583 0.46582612 2037 Q00536 CDK16 Cyclin-dependent kinase 16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 21.734 21.98 2 0.0082674 22994 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 86.794 46.691 33695000 0 0 0 0 6204600 0 8881500 0 0 0 0 8265200 0 0 10344000 25513 2037 23265 215080;215081;215082;215083;215084;215085 171802;171803;171804;171805;171806;171807 171807 6 ISTETEETEGSLHCCK Unmodified 1879.7928 0.79279228 5198 Q9Y4E8 USP15 Ubiquitin carboxyl-terminal hydrolase 15 yes yes 0 0 0 By MS/MS 2.5 0.5 2 2 4 32.539 28.032 2;3 1.1682E-73 36861 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 159.22 155.12 212010000 0 212010000 0 0 0 0 0 0 0 0 0 0 0 0 0 25514 5198 23266 215086;215087;215088;215089 171808;171809;171810;171811;171812;171813;171814 171810 7 ISTISSVR Unmodified 861.49198 0.4919813 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 28.413 28.625 2 0.025292 30666 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 58.815 28.203 397310000 0 0 0 53627000 23642000 0 29193000 40225000 19276000 42556000 44700000 48542000 36910000 24135000 34505000 25515 1029 23267 215090;215091;215092;215093;215094;215095;215096;215097;215098;215099;215100 171815;171816;171817;171818;171819 171818 4 ISTITPQIQAFNLQK Unmodified 1700.9461 0.94612052 1273 P30260 CDC27 Cell division cycle protein 27 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 82.382 81.813 2 5.252E-20 94626 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 113.44 89.721 307390000 12378000 0 0 9080200 17755000 25139000 14194000 19725000 16429000 40929000 23586000 34652000 17211000 26608000 49702000 25516 1273 23268 215101;215102;215103;215104;215105;215106;215107;215108;215109;215110;215111;215112;215113 171820;171821;171822;171823;171824;171825;171826;171827;171828;171829;171830;171831;171832;171833 171824 14 ISTLPQLNSALVQDLAK Unmodified 1810.02 0.020013746 1003 P14635 CCNB1 G2/mitotic-specific cyclin-B1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 92.013 90.923 2 0.0011162 105211 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.218 34.276 56311000 0 46348000 0 0 0 0 0 0 0 4021900 1843200 0 0 0 4098300 25517 1003 23269 215114;215115;215116;215117 171834;171835;171836;171837;171838 171836 5 ISTLSCENK Unmodified 1050.5016 0.5015597 2367 Q14116 IL18 Interleukin-18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.12 3.89 3 1 4 1 2 1 1 1 1 1 19.664 18.016 2 0.0080137 21707 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 91.318 44.892 605240000 18311000 543650000 4804400 0 0 0 0 0 0 0 5845800 7146100 0 5009400 20470000 25518 2367 23270 215118;215119;215120;215121;215122;215123;215124;215125 171839;171840;171841;171842;171843;171844 171840 5 ISTPQTNTVPIK Unmodified 1297.7242 0.72416608 4138 Q9BTA9 WAC WW domain-containing adapter protein with coiled-coil yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.076 49.234 2 3.0211E-08 55137 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 157.66 122.37 722840000 0 0 0 44717000 38164000 47201000 53323000 49252000 47850000 53550000 78333000 80407000 83061000 57547000 89441000 25519 4138 23271 215126;215127;215128;215129;215130;215131;215132;215133;215134;215135;215136;215137 171845;171846;171847;171848;171849;171850;171851;171852;171853;171854;171855;171856;171857 171855 13 ISTPQTNTVPIKPLISTPPVSSQPK Unmodified 2629.4691 0.46906759 4138 Q9BTA9 WAC WW domain-containing adapter protein with coiled-coil yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 78.612 78.651 3 0.00070977 90906 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 30.306 27.866 21895000 0 0 0 0 5179800 0 7117100 5219100 0 4378900 0 0 0 0 0 25520 4138 23272 215138;215139;215140;215141 171858;171859;171860 171860 3 ISTQLDFASK Unmodified 1108.5764 0.57643921 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 57.286 55.738 2 0.00018285 71200 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.62 84.367 1955400000 28137000 1593600000 16204000 15587000 16007000 23759000 27462000 26948000 19097000 37107000 40138000 47378000 0 0 64034000 25521 965 23273 215142;215143;215144;215145;215146;215147;215148;215149;215150;215151;215152;215153;215154;215155;215156 171861;171862;171863;171864;171865;171866;171867;171868;171869;171870;171871;171872;171873;171874;171875;171876;171877 171864 11 ISTSLNPGNPVNNQIFLQEYVANLLK Unmodified 2885.5287 0.52870774 237 O14980 XPO1 Exportin-1 yes yes 0 0 0 By MS/MS 2 0 1 1 101.92 97.206 3 2.3628E-08 120094 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.478 64.579 13115000 0 13115000 0 0 0 0 0 0 0 0 0 0 0 0 0 25522 237 23274 215157 171878;171879 171879 2 ISTSPSVALSK Unmodified 1088.6077 0.60773933 2989 Q6W2J9 BCOR BCL-6 corepressor yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 42.242 42.434 2 0.0084316 46808 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 51.531 19.389 87545000 0 0 0 5989700 6757600 0 8765700 8561500 5831100 0 10776000 9085800 10500000 8789300 12489000 25523 2989 23275 215158;215159;215160;215161;215162;215163;215164;215165;215166;215167 171880;171881;171882 171882 3 ISTTTSEEPCRDK Unmodified 1522.6933 0.69333623 255 O15119 TBX3 T-box transcription factor TBX3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.42 2 1 1 24 2 2 2 2 2 2 2 2 2 2 2 2 2 14.448 14.325 2;3 0.00039944 13581 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 65.092 52.732 440040000 0 15842000 0 22753000 31797000 22708000 22156000 29946000 21469000 40019000 34722000 57234000 46784000 39970000 54638000 25524 255 23276 215168;215169;215170;215171;215172;215173;215174;215175;215176;215177;215178;215179;215180;215181;215182;215183;215184;215185;215186;215187;215188;215189;215190;215191;215192;215193 171883;171884;171885;171886;171887;171888;171889;171890;171891;171892;171893;171894;171895;171896;171897;171898 171898 16 ISTVAVQSVNAGAPLITSTSPTTATSPK Unmodified 2698.4389 0.43888968 2567 Q15723 ELF2 ETS-related transcription factor Elf-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.987 79.045 3 5.2693E-31 91042 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.832 62.834 276780000 0 0 0 8571000 21530000 21740000 18797000 25216000 19140000 26732000 26557000 36903000 21912000 18963000 30717000 25525 2567 23277 215194;215195;215196;215197;215198;215199;215200;215201;215202;215203;215204;215205 171899;171900;171901;171902;171903;171904;171905;171906;171907 171900 8 ISTVIGPNDQK Unmodified 1170.6245 0.62445203 3492 Q8TCU4 ALMS1 Alstrom syndrome protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 40.492 35.44 2 0.041489 46236 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 63.734 44.952 9149200 0 9149200 0 0 0 0 0 0 0 0 0 0 0 0 0 25526 3492 23278 215206 171908 171908 1 ISTVVSSK Unmodified 819.47018 0.47018322 1386 P37108 SRP14 Signal recognition particle 14 kDa protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18.791 18.187 2 0.0093409 18593 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 83.206 43.103 2221300000 76304000 1375200000 28118000 40123000 48749000 52353000 49485000 43906000 38762000 73825000 73878000 92681000 57040000 66574000 104250000 25527 1386 23279 215207;215208;215209;215210;215211;215212;215213;215214;215215;215216;215217;215218;215219;215220;215221 171909;171910;171911;171912;171913;171914;171915;171916;171917;171918 171915 7 ISVATGALEAAQGSK Unmodified 1401.7464 0.74635808 1663 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.45 58.565 2 2.6251E-41 65714 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 197.43 139.47 460950000 0 0 0 38389000 31976000 29396000 45483000 37154000 28402000 37627000 39444000 39168000 35515000 34818000 63580000 25528 1663 23280 215222;215223;215224;215225;215226;215227;215228;215229;215230;215231;215232;215233 171919;171920;171921;171922;171923;171924;171925;171926;171927;171928;171929;171930;171931 171926 13 ISVESIPSLR Unmodified 1099.6237 0.62372375 488 O75376 NCOR1 Nuclear receptor corepressor 1 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 72.765 72.808 2 0.0055824 83347 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.371 38.295 210640000 0 0 0 13290000 20518000 17494000 17642000 19319000 12000000 22058000 18963000 0 16723000 18153000 34481000 25529 488 23281 215234;215235;215236;215237;215238;215239;215240;215241;215242;215243;215244 171932;171933;171934;171935;171936;171937 171933 3 ISVLQNNYEK Unmodified 1206.6245 0.62445203 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 6.56 3.86 3 1 5 1 2 1 1 1 1 1 1 49.02 46.27 2 1.0701E-05 59562 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 159.58 107.18 182430000 10812000 144630000 1929800 771460 0 0 2996700 0 0 0 6495600 0 0 0 14793000 25530 2495 23282 215245;215246;215247;215248;215249;215250;215251;215252;215253 171938;171939;171940;171941;171942 171938 5 ISVPIDLQK Unmodified 1011.5964 0.59644637 1582 P49642 PRIM1 DNA primase small subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.654 70.726 2 0.0051431 81000 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 82.279 54.061 230240000 0 0 0 9312300 12821000 16654000 15773000 15720000 11153000 24396000 26937000 24899000 17141000 19889000 35543000 25531 1582 23283 215254;215255;215256;215257;215258;215259;215260;215261;215262;215263;215264;215265 171943;171944;171945;171946;171947;171948;171949;171950;171951;171952;171953;171954 171945 12 ISVPNCAPAASSLDGNK Unmodified 1699.8199 0.81993373 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 0 0 By MS/MS 2 0 1 1 63.265 57.371 2 1.4594E-05 73582 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.856 75.489 15118000 0 15118000 0 0 0 0 0 0 0 0 0 0 0 0 0 25532 2193 23284 215266 171955 171955 1 ISVPNCAPAASSLDGNKPAESSLAFSNEETSTEK Unmodified 3507.6311 0.63113649 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching 10 0 5 1 1 1 1 1 74.668 74.863 3 1.226E-08 86291 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 35.132 31.261 39036000 0 0 0 0 0 0 0 7580600 0 10287000 6067800 0 0 3781100 11319000 25533 2193 23285 215267;215268;215269;215270;215271 171956;171957;171958;171959 171956 4 ISVREPMQTGIK Unmodified 1357.7388 0.73877028 1192 P25705 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 2 1 1 1 1 1 45.836 46.004 3 0.0010725 52470 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 55.314 23.471 174490000 0 0 0 13544000 9543300 13793000 12167000 12501000 12511000 18331000 19247000 3583900 20395000 10862000 28012000 25534 1192 23286 215272;215273;215274;215275;215276;215277;215278;215279;215280;215281;215282;215283;215284 171960;171961;171962;171963;171964;171965;171966;171967;171968;171969 171968 10 ISVSFYHVK Unmodified 1078.5811 0.58113065 1776 P55884 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 57.036 57.318 2 0.011037 65495 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 63.419 31.577 64142000 0 0 0 0 0 6889300 0 3403400 4003500 4749700 9302800 6525600 8333700 7881600 13052000 25535 1776 23287 215285;215286;215287;215288;215289;215290;215291;215292;215293 171970 171970 1 ISVTQPDSIVGIVAVDK Unmodified 1739.9669 0.96691554 2995 Q6YHK3 CD109 CD109 antigen yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 85.68 85.747 2 1.4471E-18 99245 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 122.46 112.09 135220000 0 0 0 1983300 9778800 8075800 7074600 9380600 8335600 18655000 15822000 19736000 8440000 11206000 16727000 25536 2995 23288 215294;215295;215296;215297;215298;215299;215300;215301;215302;215303;215304;215305 171971;171972;171973;171974;171975;171976;171977;171978;171979;171980;171981;171982;171983 171977 13 ISVVPTQPGLLLSSSGDGTLR Unmodified 2096.1477 0.14773345 1791 P57081 WDR4 tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 87.153 87.303 2 1.5594E-11 101020 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.904 75.628 19552000 0 0 0 0 0 0 0 812620 0 3956800 2125700 2937300 0 2361100 7358500 25537 1791 23289 215306;215307;215308;215309;215310;215311 171984;171985;171986;171987;171988;171989 171986 6 ISVYSIMGGSTDGLR Oxidation (M) 1570.7661 0.76610725 614 O94979 SEC31A Protein transport protein Sec31A yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 69.58 69.657 2 0.0017913 79908 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 46.592 33.472 22609000 0 0 0 1676000 0 2405700 0 2703400 0 4775600 0 6259000 0 0 4789700 25538 614 23290 215312;215313;215314;215315;215316;215317 171990;171991;171992 171990 753 2 ISVYYNEASSHK Unmodified 1396.6623 0.6622941 2306 Q13509 TUBB3 Tubulin beta-3 chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.24 2.35 2 19 1 1 2 2 1 1 1 1 1 2 2 2 2 2 35.053 34.754 2;3 0.00015222 38304 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 85.963 71.756 677930000 29648000 0 8535300 30543000 26115000 29160000 34701000 33956000 29525000 51574000 81772000 85845000 59073000 52757000 124730000 25539 2306 23291 215318;215319;215320;215321;215322;215323;215324;215325;215326;215327;215328;215329;215330;215331;215332;215333;215334;215335;215336;215337;215338 171993;171994;171995;171996;171997;171998;171999;172000;172001;172002;172003;172004;172005;172006;172007;172008;172009;172010;172011;172012;172013 172006 12 ISVYYNEATGGK Unmodified 1300.6299 0.62993134 842 P07437 TUBB Tubulin beta chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.34 3.24 6 23 2 2 2 2 1 2 2 2 1 2 2 2 3 2 2 46.778 46.321 2 4.5163E-34 51102 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 174.86 138.31 39613000000 9321800 251730000 3930000 1918700000 2308300000 2654300000 2512200000 2940200000 2318400000 3507400000 4179200000 5381700000 3292200000 3233300000 5101500000 25540 842 23292 215339;215340;215341;215342;215343;215344;215345;215346;215347;215348;215349;215350;215351;215352;215353;215354;215355;215356;215357;215358;215359;215360;215361;215362;215363;215364;215365;215366;215367 172014;172015;172016;172017;172018;172019;172020;172021;172022;172023;172024;172025;172026;172027;172028;172029;172030;172031;172032;172033;172034;172035;172036;172037;172038;172039;172040;172041;172042;172043;172044;172045;172046;172047;172048;172049;172050;172051;172052;172053;172054;172055;172056;172057;172058;172059;172060;172061;172062;172063;172064;172065;172066;172067;172068;172069;172070 172026 54 ISWEEYK Unmodified 953.44945 0.44944778 2515 Q15293 RCN1 Reticulocalbin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.08 3.33 2 1 9 2 1 1 1 1 1 1 1 1 1 1 53.384 52.399 2 0.022033 65540 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 108.24 81.176 1429200000 0 844910000 72681000 0 0 13130000 26697000 20600000 12738000 0 85908000 89095000 29027000 62201000 172190000 25541 2515 23293 215368;215369;215370;215371;215372;215373;215374;215375;215376;215377;215378;215379 172071;172072;172073;172074;172075 172075 5 ISWLEGQPQDAVGR Unmodified 1554.7791 0.77905519 4671 Q9NVM6 DNAJC17 DnaJ homolog subfamily C member 17 yes yes 0 0 0 By MS/MS 10 0 1 1 72.377 72.617 2 0.030741 83662 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 53.528 27.589 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25542 4671 23294 215380 172076 172076 1 ISYAQYEK Unmodified 1000.4866 0.48656157 2150 Q08188 TGM3 Protein-glutamine gamma-glutamyltransferase E;Protein-glutamine gamma-glutamyltransferase E 50 kDa catalytic chain;Protein-glutamine gamma-glutamyltransferase E 27 kDa non-catalytic chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 35.168 35.25 2 0.036073 38966 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 86.833 63.309 291440000 0 0 0 105990000 14747000 15910000 18316000 65215000 15081000 0 20595000 35582000 0 0 0 25543 2150 23295 215381;215382;215383;215384;215385;215386;215387;215388 172077;172078 172077 0 ISYQSSSTEER Unmodified 1285.5786 0.57862405 781;2074 Q02383;P04279 SEMG2;SEMG1 Semenogelin-2;Semenogelin-1;Alpha-inhibin-92;Alpha-inhibin-31;Seminal basic protein no no 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 19.634 19.644 2 0.0011678 19947 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 88.496 68.709 20477000 0 0 0 3457600 0 0 0 17019000 0 0 0 0 0 0 0 25544 2074;781 23296 215389;215390 172079;172080 172079 2 ISYQSSSTEERR Unmodified 1441.6797 0.67973508 781;2074 Q02383;P04279 SEMG2;SEMG1 Semenogelin-2;Semenogelin-1;Alpha-inhibin-92;Alpha-inhibin-31;Seminal basic protein no no 0 0 1 By MS/MS 10 0 1 1 14.776 14.938 3 0.0069307 14486 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 28.789 25.705 3418100 0 0 0 0 0 0 0 3418100 0 0 0 0 0 0 0 25545 2074;781 23297 215391 172081 172081 1 ISYSQYSQYLSTDK Unmodified 1681.7835 0.78353145 341 O43548 TGM5 Protein-glutamine gamma-glutamyltransferase 5 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 72.193 71.997 2 0.00065896 83515 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 74.326 58.188 12676000 0 0 0 4095900 0 0 0 8579900 0 0 0 0 0 0 0 25546 341 23298 215392;215393 172082;172083;172084 172084 3 ISYVVQSLK Unmodified 1035.5964 0.59644637 584 O94782 USP1 Ubiquitin carboxyl-terminal hydrolase 1 yes yes 0 0 0 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 56.55 56.764 2 0.024054 63632 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 50.805 29.516 17248000 0 0 0 0 0 0 4340600 0 2815000 0 5444200 0 0 4648200 0 25547 584 23299 215394;215395;215396;215397 172085 172085 1 ITAAQHSVTGSAVSK Unmodified 1455.7682 0.76815616 2300 Q13492 PICALM Phosphatidylinositol-binding clathrin assembly protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 2 2 2 1 2 2 1 2 2 1 20.691 20.829 2;3 1.4843E-97 20332 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 211.83 176.32 540810000 0 0 0 5371500 39390000 56075000 63794000 4511300 19694000 93976000 82244000 0 76339000 71217000 28197000 25548 2300 23300 215398;215399;215400;215401;215402;215403;215404;215405;215406;215407;215408;215409;215410;215411;215412;215413;215414;215415 172086;172087;172088;172089;172090;172091;172092;172093;172094;172095;172096;172097;172098;172099 172091 12 ITADLLSNGIDVYPQK Unmodified 1745.92 0.91996535 4898 Q9UHD8 SEPT9 Septin-9 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.4 82.454 2 1.9508E-20 95411 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 111.86 97.41 51988000 0 0 0 1453200 3313100 5959900 3791800 3380500 4070200 7215200 8173800 0 4072500 3755700 6801600 25549 4898 23301 215416;215417;215418;215419;215420;215421;215422;215423;215424;215425;215426;215427 172100;172101;172102;172103;172104;172105;172106;172107;172108;172109;172110 172110 11 ITADQALK Unmodified 858.48108 0.48108226 2315 Q13555 CAMK2G Calcium/calmodulin-dependent protein kinase type II subunit gamma yes yes 0 0 0 By MS/MS 10 0 1 1 28.845 29.163 2 0.03661 30233 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 51.787 7.0951 57147000 0 0 0 0 0 0 0 0 0 0 0 0 0 57147000 0 25550 2315 23302 215428 172111 172111 1 ITAEEMYDIFGK Oxidation (M) 1431.6592 0.65918256 5151 Q9Y3B4 SF3B6 Splicing factor 3B subunit 6 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.47 2 1 14 1 1 1 2 1 1 1 1 1 2 1 1 1 73.245 73.321 2 1.7087E-05 83359 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 94.297 84.939 216190000 0 0 0 7144100 14429000 16014000 10232000 11102000 12270000 19562000 21789000 42308000 18388000 16924000 26026000 25551 5151 23303 215429;215430;215431;215432;215433;215434;215435;215436;215437;215438;215439;215440;215441;215442;215443 172112;172113;172114;172115;172116;172117;172118;172119;172120;172121;172122;172123;172124 172120 6531 13 ITAEEMYDIFGK Unmodified 1415.6643 0.66426794 5151 Q9Y3B4 SF3B6 Splicing factor 3B subunit 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87.571 86.549 2 4.8295E-08 100279 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 121.83 111.31 372670000 18622000 208220000 4560700 0 3680400 6043700 4040000 9493100 6778000 15206000 14750000 14595000 5193300 12164000 49326000 25552 5151 23303 215444;215445;215446;215447;215448;215449;215450;215451;215452;215453;215454;215455;215456;215457 172125;172126;172127;172128;172129;172130;172131;172132;172133;172134;172135;172136;172137;172138;172139;172140 172130 16 ITAEIFSPNDK Unmodified 1233.6241 0.62411768 3995 Q96SU4 OSBPL9 Oxysterol-binding protein-related protein 9 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 60.606 60.899 2 0.018046 69423 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 53.756 28.306 20941000 0 0 0 0 0 0 0 0 1287700 4054700 4064700 0 0 3787600 7746700 25553 3995 23304 215458;215459;215460;215461;215462 172141;172142;172143;172144;172145 172143 5 ITAEIFSPNDKK Unmodified 1361.7191 0.7190807 3995 Q96SU4 OSBPL9 Oxysterol-binding protein-related protein 9 yes yes 0 0 1 By MS/MS By matching 10 0 2 1 1 49.457 49.979 3 0.0076843 55817 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 28.361 23.468 28305000 0 0 0 0 0 0 0 0 0 0 0 12458000 15847000 0 0 25554 3995 23305 215463;215464 172146 172146 1 ITAFIVER Unmodified 947.54402 0.54401687 4445 Q9H845 ACAD9 Acyl-CoA dehydrogenase family member 9, mitochondrial yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 62.925 62.865 2 0.039628 72849 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 50.607 8.4978 7713100 0 0 0 5992000 0 0 0 0 0 0 0 0 0 0 1721100 25555 4445 23306 215465;215466 172147 172147 1 ITAFVPNDGCLNFIEENDEVLVAGFGRK Unmodified 3123.5335 0.53353512 1884 P62266 RPS23 40S ribosomal protein S23 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 97.919 92.098 3 1.3031E-06 116506 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 44.811 38.97 42452000 42452000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25556 1884 23307 215467;215468 172148;172149 172149 1 ITAFVVER Unmodified 933.52837 0.5283668 1591 P49748 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 55.53 55.669 2 0.036848 63041 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 94.302 46.454 108980000 0 0 0 0 0 0 28836000 37137000 0 43010000 0 0 0 0 0 25557 1591 23308 215469;215470;215471 172150 172150 0 ITAHSSPPLTK Unmodified 1150.6346 0.63462279 2561 Q15652 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 21.138 21.301 3 0.048569 22308 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 25.194 0.35635 44754000 0 0 0 2692600 3964000 3022900 4944600 4507600 3208900 2769000 4400800 0 5791500 3536600 5914900 25558 2561 23309 215472;215473;215474;215475;215476;215477;215478;215479;215480;215481;215482 172151 172151 1 ITALDEFATK Unmodified 1107.5812 0.58119023 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 65.707 65.216 2 0.00046615 74878 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 135.71 35.909 1466800000 0 1256600000 0 11906000 11595000 20581000 15708000 16982000 8968900 22613000 30291000 0 18698000 0 52835000 25559 2344 23310 215483;215484;215485;215486;215487;215488;215489;215490;215491;215492;215493;215494 172152;172153;172154;172155;172156;172157;172158;172159;172160;172161;172162;172163 172152 7 ITALEDISTEDGDRLYSLCK Unmodified 2298.1049 0.10494194 311 O43264 ZW10 Centromere/kinetochore protein zw10 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 83.959 78.838 3 1.8972E-29 100278 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 115.34 106.85 70125000 13833000 52695000 3596800 0 0 0 0 0 0 0 0 0 0 0 0 25560 311 23311 215495;215496;215497 172164;172165;172166 172165 3 ITALSEK Unmodified 760.43307 0.43306943 3755 Q96BD5 PHF21A PHD finger protein 21A yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 22.604 18.719 2 0.038776 24500 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.784 14.749 67526000 0 67526000 0 0 0 0 0 0 0 0 0 0 0 0 0 25561 3755 23312 215498;215499 172167 172167 1 ITAMDTEDQGVK Unmodified 1306.6075 0.60748134 4428 Q9H6Z4 RANBP3 Ran-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 32.179 32.37 2 2.3619E-05 35597 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 91.584 59.649 60508000 0 0 0 1890600 1892100 3976200 2610400 4227500 0 5914700 8168800 5765900 3363500 4264600 18434000 25562 4428 23313 215500;215501;215502;215503;215504;215505;215506;215507;215508;215509;215510 172168;172169;172170;172171;172172;172173;172174;172175;172176;172177;172178;172179;172180 172168 13 ITAMDTEDQGVK Oxidation (M) 1322.6024 0.60239596 4428 Q9H6Z4 RANBP3 Ran-binding protein 3 yes yes 0 1 0 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 20.508 20.832 2 0.00063433 20706 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.006 48.577 12003000 0 0 0 0 0 0 2722000 1817100 0 0 3006500 0 0 0 4457700 25563 4428 23313 215511;215512;215513;215514 172181 172181 5877 1 ITAQENDMEVELPAAANSR Unmodified 2057.9688 0.96878281 4043 Q99661 KIF2C Kinesin-like protein KIF2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 70.21 70.269 2 4.3365E-17 80715 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 116.84 104.67 49301000 0 0 0 3142700 2667700 4431100 0 4070600 0 4175700 4889500 5933300 4622000 4093000 11275000 25564 4043 23314 215515;215516;215517;215518;215519;215520;215521;215522;215523;215524 172182;172183;172184;172185;172186;172187;172188;172189;172190 172184 9 ITAQENDMEVELPAAANSRK Unmodified 2186.0637 0.063745829 4043 Q99661 KIF2C Kinesin-like protein KIF2C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 61.99 62.082 3 9.7043E-22 70899 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 97.488 87.324 111150000 0 0 0 7073000 6010500 9887600 8941200 8247600 7647400 7901600 12133000 13354000 0 8779200 21174000 25565 4043 23315 215525;215526;215527;215528;215529;215530;215531;215532;215533;215534;215535 172191;172192;172193;172194;172195;172196;172197;172198;172199;172200;172201;172202;172203;172204 172199 14 ITAQQITTPGAQQK Unmodified 1483.7995 0.79945628 3915 Q96L91 EP400 E1A-binding protein p400 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.141 40.32 2 5.2038E-12 44766 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 103.31 91.446 132010000 0 0 0 8499500 6943400 8214900 11067000 10516000 5753400 16494000 14167000 13949000 12588000 12124000 11695000 25566 3915 23316 215536;215537;215538;215539;215540;215541;215542;215543;215544;215545;215546;215547 172205;172206;172207;172208;172209;172210;172211;172212;172213;172214;172215;172216 172207 12 ITAQSIEELCAVNLYGPDAQVDR Unmodified 2561.2432 0.24316676 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 2 1 1 2 87.207 87.355 2;3 3.1516E-05 101031 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.13 29.554 29685000 0 0 0 0 0 0 0 1702600 0 7988600 3481200 0 0 2206600 14306000 25567 1986 23317 215548;215549;215550;215551;215552;215553;215554 172217;172218;172219;172220;172221 172219 5 ITASLCDLK Unmodified 1019.5321 0.53213155 2057 Q01581 HMGCS1 Hydroxymethylglutaryl-CoA synthase, cytoplasmic yes yes 0 0 0 By MS/MS 2 0 1 1 59.354 53.511 2 0.0089039 68940 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.819 60.307 123940000 0 123940000 0 0 0 0 0 0 0 0 0 0 0 0 0 25568 2057 23318 215555 172222;172223 172223 2 ITATDFYPLQEEAK Unmodified 1624.7985 0.79845323 246 O15056 SYNJ2 Synaptojanin-2 yes yes 0 0 0 By MS/MS 2 0 1 1 81.054 76.349 2 0.0025611 95037 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.486 48.622 59656000 0 59656000 0 0 0 0 0 0 0 0 0 0 0 0 0 25569 246 23319 215556 172224 172224 1 ITCLCQVPQNAANRGLK Unmodified 1941.9877 0.98768453 1578 P49588 AARS Alanine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS 2 0 1 1 60.722 52.481 3 0.00031887 71297 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.354 62.07 30017000 30017000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25570 1578 23320 215557 172225;172226;172227;172228;172229 172229 5 ITDAFSSLAK Unmodified 1051.555 0.55497548 4358 Q9H267 VPS33B Vacuolar protein sorting-associated protein 33B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 59.537 59.565 2 0.039105 66889 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.331 23.555 38149000 0 0 0 4237500 2290100 0 2958200 1919000 0 6886100 0 0 6813100 3567400 9477700 25571 4358 23321 215558;215559;215560;215561;215562;215563;215564;215565 172230 172230 1 ITDAYLDQYLWYEADK Unmodified 2005.9309 0.93092397 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 0 By MS/MS 2 0 1 1 93.886 85.755 2 8.009E-05 111087 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 120.84 105.45 11428000 11428000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25572 2930 23322 215566 172231 172231 1 ITDDSRRCSQVK Unmodified 1463.7151 0.71507473 487 O75369 FLNB Filamin-B yes yes 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 7.4772 4.6109 3 0.024407 7879 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.463 25.339 301320000 293320000 0 8001000 0 0 0 0 0 0 0 0 0 0 0 0 25573 487 23323 215567;215568 172232 172232 1 ITDEEATK Unmodified 905.43419 0.43419164 861 P08237 PFKM ATP-dependent 6-phosphofructokinase, muscle type yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.0281 7.1518 2 0.0044044 4585 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.81 43.814 150900000 0 0 0 8189100 13370000 19397000 16041000 20275000 18487000 7352400 13458000 7095400 9424700 6965500 10841000 25574 861 23324 215569;215570;215571;215572;215573;215574;215575;215576;215577;215578;215579;215580 172233;172234;172235;172236;172237;172238;172239;172240 172236 7 ITDEFIEK Unmodified 993.50188 0.50187728 3224 Q8IVB5 LIX1L LIX1-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 46.527 46.686 2 0.0099634 52378 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 81.191 39.888 88918000 0 0 0 9451800 8713400 8964000 9809600 0 6651200 11462000 12163000 10137000 5196700 0 6369000 25575 3224 23325 215581;215582;215583;215584;215585;215586;215587;215588;215589;215590 172241;172242;172243;172244;172245;172246;172247;172248;172249;172250;172251 172246 11 ITDFGEFMR Unmodified 1114.5117 0.51173046 4672 Q9NVM9 ASUN Protein asunder homolog yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 75.912 75.952 2 0.02892 87133 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.794 37.921 30894000 0 0 0 1052600 0 3641800 2677200 0 0 4065200 0 0 5182400 2923900 11351000 25576 4672 23326 215591;215592;215593;215594;215595;215596;215597 172252;172253 172252 2 ITDGLHALQEASNK Unmodified 1495.7631 0.76307078 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.58 6 1 17 2 3 2 1 1 2 1 1 1 2 1 2 1 2 2 50.775 49.239 2;3 1.9588E-19 55534 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 134.56 116.25 2079600000 57657000 586420000 379620000 40170000 30923000 117950000 50391000 42337000 80488000 111960000 87281000 129720000 69649000 89722000 205320000 25577 643 23327 215598;215599;215600;215601;215602;215603;215604;215605;215606;215607;215608;215609;215610;215611;215612;215613;215614;215615;215616;215617;215618;215619;215620;215621 172254;172255;172256;172257;172258;172259;172260;172261;172262;172263;172264;172265;172266;172267;172268;172269;172270;172271;172272;172273;172274;172275;172276;172277;172278 172255 22 ITDLQNQLK Unmodified 1071.5924 0.59242362 478 O75330 HMMR Hyaluronan mediated motility receptor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 42.636 41.784 2 0.0032655 47506 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 130.04 69.357 116780000 0 25932000 0 0 11939000 12348000 8284700 0 0 14203000 0 14306000 15171000 10659000 3936700 25578 478 23328 215622;215623;215624;215625;215626;215627;215628;215629;215630;215631 172279;172280;172281;172282;172283 172282 3 ITDLYTDLRDGR Unmodified 1436.726 0.72595699 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 1 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 60.646 60.745 3 0.0049159 69118 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 40.725 29.445 61158000 0 0 0 2220700 1674700 5626500 4087900 4491000 0 4083600 4437900 6801300 3919900 5694500 18120000 25579 2047 23329 215632;215633;215634;215635;215636;215637;215638;215639;215640;215641;215642 172284;172285;172286 172286 3 ITDMQLGGSVEISK Oxidation (M) 1492.7443 0.74430917 2221 Q12986 NFX1 Transcriptional repressor NF-X1 yes yes 0 1 0 By MS/MS 2 0 1 1 56.852 51.03 2 0.0004891 65906 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.189 68.902 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25580 2221 23330 215643 172287 172287 3610 1 ITDPCRGEVLTFK Unmodified 1534.7814 0.78136338 2867 Q6BDS2 UHRF1BP1 UHRF1-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 58.774 58.959 3 0.0084196 67468 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 42.789 31.339 71398000 0 0 0 0 5867500 4822300 6981200 10034000 4672600 6354900 7597000 3414000 7448400 6006600 8199900 25581 2867 23331 215644;215645;215646;215647;215648;215649;215650;215651;215652;215653;215654 172288;172289;172290;172291;172292 172292 5 ITDSAGHILYSK Unmodified 1303.6772 0.67721588 1595 P49755 TMED10 Transmembrane emp24 domain-containing protein 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.43 3.14 5 1 24 3 1 2 2 2 2 2 2 2 2 2 2 2 2 2 40.278 39.514 2;3 3.821E-75 43827 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 214.82 183.06 2166000000 81009000 3270800 157860000 99331000 115100000 125720000 107900000 142180000 112410000 191420000 222990000 233690000 185160000 164090000 223910000 25582 1595 23332 215655;215656;215657;215658;215659;215660;215661;215662;215663;215664;215665;215666;215667;215668;215669;215670;215671;215672;215673;215674;215675;215676;215677;215678;215679;215680;215681;215682;215683;215684 172293;172294;172295;172296;172297;172298;172299;172300;172301;172302;172303;172304;172305;172306;172307;172308;172309;172310;172311;172312;172313;172314;172315;172316;172317;172318 172313 14 ITDSEASKPK Unmodified 1074.5557 0.55570376 4697 Q9NWH9 SLTM SAFB-like transcription modulator yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 7.2855 3.9847 2 0.039885 6045 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.645 32.518 21162000 0 21162000 0 0 0 0 0 0 0 0 0 0 0 0 0 25583 4697 23333 215685;215686 172319 172319 1 ITDVDNGYYTVK Unmodified 1386.6667 0.66671078 3342 Q8N5A5 ZGPAT Zinc finger CCCH-type with G patch domain-containing protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 49.149 49.007 2 0.0023647 55757 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 63.32 44.648 25493000 0 0 0 4499000 5435000 0 0 0 0 0 0 0 0 0 15559000 25584 3342 23334 215687;215688;215689;215690;215691;215692 172320;172321;172322;172323 172323 4 ITDVLDQK Unmodified 930.50221 0.50221163 3998 Q96T51 RUFY1 RUN and FYVE domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.6 37.781 2 0.0062563 40542 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 102.41 32.423 214320000 0 0 0 11392000 11075000 14932000 13768000 10838000 9252300 21065000 20446000 26073000 19902000 14683000 40894000 25585 3998 23335 215693;215694;215695;215696;215697;215698;215699;215700;215701;215702;215703;215704 172324;172325;172326;172327;172328;172329;172330;172331 172327 6 ITDYGGDK Unmodified 867.39741 0.39741221 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 0 By MS/MS 10 0 1 1 9.3407 9.7464 2 0.041222 7940 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 50.04 17.57 6260900 0 0 0 0 0 0 0 0 0 0 6260900 0 0 0 0 25586 528 23336 215705 172332 172332 1 ITEAIGIISK Unmodified 1043.6227 0.62266112 2476 Q15021 NCAPD2 Condensin complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 63.42 61.902 2 2.571E-05 75718 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 134.25 69.209 322000000 15992000 235280000 15234000 0 2790900 6750900 3809800 3183700 4619100 6239400 6378200 0 4101900 4740200 12880000 25587 2476 23337 215706;215707;215708;215709;215710;215711;215712;215713;215714;215715;215716;215717;215718;215719;215720 172333;172334;172335;172336;172337;172338;172339;172340;172341;172342;172343;172344;172345;172346;172347 172338 13 ITEAPASEK Unmodified 944.48148 0.48147619 2003 P82970 HMGN5 High mobility group nucleosome-binding domain-containing protein 5 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 8.67 2.98 1 5 1 1 1 1 1 1 11.161 10.712 2 0.012354 9739 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 93.143 51.841 115650000 0 80468000 0 0 0 0 1813000 0 0 0 5811300 0 0 8581800 18974000 25588 2003 23338 215721;215722;215723;215724;215725;215726 172348;172349;172350;172351 172351 4 ITEDFIATYQANYGFSNDGASSSTANVEDVHARTAEEPPQEK Unmodified 4559.0637 0.063688652 360 O43719 HTATSF1 HIV Tat-specific factor 1 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 82.747 76.819 4 2.306E-38 98883 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.062 63.06 24300000 24300000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25589 360 23339 215727;215728 172352;172353;172354;172355 172355 4 ITEDSAVTTFEALK Unmodified 1523.7719 0.77190413 2813 Q5VTB9 RNF220 E3 ubiquitin-protein ligase RNF220 yes yes 0 0 0 By MS/MS By MS/MS 5 3.56 1 1 1 2 1 82.051 77.346 2 1.0092E-05 95999 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.97 110.34 153020000 0 153020000 0 0 0 0 0 0 0 0 0 0 0 0 0 25590 2813 23340 215729;215730;215731 172356;172357;172358 172356 3 ITEELNLR Unmodified 986.53966 0.53965977 2592 Q15906 VPS72 Vacuolar protein sorting-associated protein 72 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.147 49.305 2 0.0075889 55526 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 89.123 42.129 283030000 0 0 0 24028000 18356000 22150000 23211000 21950000 18694000 0 34309000 38966000 26853000 21995000 32514000 25591 2592 23341 215732;215733;215734;215735;215736;215737;215738;215739;215740;215741;215742;215743 172359;172360;172361;172362;172363;172364;172365;172366;172367;172368;172369;172370;172371;172372 172363 14 ITEGVSDTNSK Unmodified 1149.5513 0.55134667 3254 Q8IX04 UEVLD Ubiquitin-conjugating enzyme E2 variant 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 13.36 13.49 2 0.0096745 12787 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 50.292 36.713 17623000 0 0 0 1189300 1070000 2065800 1380700 0 1361500 2400200 1779400 0 1862200 1764500 2748900 25592 3254 23342 215744;215745;215746;215747;215748;215749;215750;215751;215752;215753 172373;172374;172375;172376 172373 4 ITELLNDVER Unmodified 1200.635 0.63501672 4264 Q9BZF9 UACA Uveal autoantigen with coiled-coil domains and ankyrin repeats yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 64.279 64.299 2 0.002134 73482 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 86.136 46.134 40023000 0 0 0 2854600 3798400 5072500 0 0 2818400 5739800 5391300 0 0 3497900 10850000 25593 4264 23343 215754;215755;215756;215757;215758;215759;215760;215761;215762;215763 172377;172378;172379;172380;172381;172382;172383 172378 7 ITELLNDVERLK Unmodified 1441.814 0.81404372 4264 Q9BZF9 UACA Uveal autoantigen with coiled-coil domains and ankyrin repeats yes yes 0 0 1 By MS/MS 2 0 1 1 83.396 78.676 3 0.0099615 97875 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 54.524 41.121 16278000 0 16278000 0 0 0 0 0 0 0 0 0 0 0 0 0 25594 4264 23344 215764 172384 172384 1 ITELQLK Unmodified 843.50657 0.50656873 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS 3 0 2 1 1 50.639 45.477 2 0.02063 56314 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 134.66 31.646 32006000 1400700 30606000 0 0 0 0 0 0 0 0 0 0 0 0 0 25595 965 23345 215765;215766 172385 172385 0 ITELTDENVK Unmodified 1160.5925 0.5924832 1086 P19387 POLR2C DNA-directed RNA polymerase II subunit RPB3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 36.273 36.612 2 0.0023379 39150 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 84.615 53.928 25019000 0 0 0 0 0 0 0 2634200 0 3380800 0 0 0 7121100 11883000 25596 1086 23346 215767;215768;215769;215770 172386;172387;172388;172389 172388 4 ITELTLK Unmodified 816.49567 0.49566969 4264 Q9BZF9 UACA Uveal autoantigen with coiled-coil domains and ankyrin repeats yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 46.556 46.783 2 0.035265 52256 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 70.912 9.4181 21175000 0 0 0 0 0 7044800 0 3697000 0 0 6460700 0 0 3972600 0 25597 4264 23347 215771;215772;215773;215774 172390 172390 1 ITENIGCVMTGMTADSR Unmodified 1854.8274 0.82740365 1819 P60900 PSMA6 Proteasome subunit alpha type-6 yes yes 0 0 0 By MS/MS By MS/MS 10 0 3 2 1 75.653 75.917 2 1.6586E-28 87107 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 140.1 132 31103000 0 0 0 0 0 0 0 0 0 0 7681400 0 0 0 23422000 25598 1819 23348 215775;215776;215777 172391;172392 172391 2 ITENSIVENLK Unmodified 1258.6769 0.67688153 2215 Q12965 MYO1E Unconventional myosin-Ie yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 64.825 63.17 2 5.2673E-21 77180 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 200.6 161.64 1315000000 12178000 1127700000 9441200 13456000 0 14009000 14996000 17200000 17001000 0 21052000 0 18423000 18668000 30810000 25599 2215 23349 215778;215779;215780;215781;215782;215783;215784;215785;215786;215787;215788;215789;215790 172393;172394;172395;172396;172397;172398;172399;172400;172401;172402;172403;172404;172405;172406;172407 172398 12 ITENYDCGTK Unmodified 1199.5129 0.51285267 4653 Q9NUQ8 ABCF3 ATP-binding cassette sub-family F member 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.759 18.959 2 0.00093431 19225 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 128.36 64.796 213690000 0 0 0 12528000 11541000 20538000 17129000 15385000 21298000 0 21504000 25192000 23189000 16037000 29346000 25600 4653 23350 215791;215792;215793;215794;215795;215796;215797;215798;215799;215800;215801;215802 172408;172409;172410;172411;172412;172413;172414;172415 172412 6 ITESEEVVSR Unmodified 1147.5721 0.57208211 757 P02545 LMNA Prelamin-A/C;Lamin-A/C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.604 27.801 2 1.3483E-09 29935 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 159.37 94.33 769660000 0 0 0 60373000 36621000 55129000 51960000 41148000 28132000 55255000 92044000 87013000 49119000 64674000 148190000 25601 757 23351 215803;215804;215805;215806;215807;215808;215809;215810;215811;215812;215813;215814 172416;172417;172418;172419;172420;172421;172422;172423;172424;172425 172416 7 ITESEEVVSREVSGIK Unmodified 1760.9156 0.91560825 757 P02545 LMNA Prelamin-A/C;Lamin-A/C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 60.373 60.47 3 0.011983 68950 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 32.746 26.966 99079000 0 0 0 8793400 3191900 5053400 7808400 8728600 5783500 11344000 13623000 9407000 0 8251400 17094000 25602 757 23352 215815;215816;215817;215818;215819;215820;215821;215822;215823;215824;215825 172426;172427;172428;172429 172426 2 ITESPRASMGVLSGK Oxidation (M) 1547.7977 0.79774172 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 1 1 By MS/MS 2 0 1 1 40.206 33.584 3 0.0048047 46442 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.643 29.869 39069000 39069000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25603 2203 23353 215826 172430 172430 3580 1 ITESPRASMGVLSGK Unmodified 1531.8028 0.8028271 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 0 1 By MS/MS 2 0 2 2 57.32 49.14 2;3 0.0072661 67279 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.598 28.88 54928000 54928000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25604 2203 23353 215827;215828 172431;172432 172432 1 ITESSLVEITEHK Unmodified 1484.7722 0.77223848 4030 Q99590 SCAF11 Protein SCAF11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 3 9 1 1 1 1 1 1 1 1 1 1 1 1 64.105 63.137 3 0.0033021 79195 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 48.14 35.855 113420000 7412300 0 8476700 0 5937400 8964700 9246200 7778800 8981800 11400000 0 14757000 0 15394000 15074000 25605 4030 23354 215829;215830;215831;215832;215833;215834;215835;215836;215837;215838;215839;215840 172433;172434;172435;172436;172437;172438;172439;172440 172438 8 ITESVAETAQTIK Unmodified 1389.7351 0.73512469 3732 Q96A49 SYAP1 Synapse-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.89 2.72 3 1 24 1 2 1 2 2 2 2 2 2 2 2 2 2 2 2 48.385 47.715 2;3 2.7586E-33 53706 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 201.75 131.92 4267200000 15704000 825440000 3592300 139700000 151250000 268940000 227000000 165070000 227480000 437740000 429350000 330210000 279020000 225140000 541530000 25606 3732 23355 215841;215842;215843;215844;215845;215846;215847;215848;215849;215850;215851;215852;215853;215854;215855;215856;215857;215858;215859;215860;215861;215862;215863;215864;215865;215866;215867;215868 172441;172442;172443;172444;172445;172446;172447;172448;172449;172450;172451;172452;172453;172454;172455;172456;172457;172458;172459;172460 172456 17 ITESVAETAQTIKK Unmodified 1517.8301 0.83008771 3732 Q96A49 SYAP1 Synapse-associated protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.81 2.8 3 1 22 1 2 1 2 2 1 2 2 1 2 2 2 2 2 2 40.625 39.962 2;3 9.6491E-11 44519 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 120.96 88.951 868830000 5806800 96245000 5642400 72693000 66047000 9752800 99791000 65130000 17567000 67807000 109020000 95826000 54163000 40830000 62515000 25607 3732 23356 215869;215870;215871;215872;215873;215874;215875;215876;215877;215878;215879;215880;215881;215882;215883;215884;215885;215886;215887;215888;215889;215890;215891;215892;215893;215894 172461;172462;172463;172464;172465;172466;172467;172468;172469;172470;172471;172472;172473;172474;172475;172476;172477;172478;172479;172480 172472 17 ITETEDPVK Unmodified 1030.5183 0.51825563 4598 Q9NRF8 CTPS2 CTP synthase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 24.725 24.076 2 0.007262 32090 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.429 42.797 134350000 15417000 41281000 0 4804200 0 0 5821700 5605400 0 7809600 8599400 11173000 5188400 9860500 18794000 25608 4598 23357 215895;215896;215897;215898;215899;215900;215901;215902;215903;215904;215905 172481;172482;172483;172484;172485;172486;172487 172484 7 ITEYLCEPLRK Unmodified 1420.7384 0.73843593 2178;1937 P63010;Q10567 AP2B1;AP1B1 AP-2 complex subunit beta;AP-1 complex subunit beta-1 no no 0 0 1 By MS/MS By MS/MS By MS/MS 2.33 0.471 2 1 1 1 1 60.668 55.036 3 0.0029474 68365 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 67.385 59.519 143850000 98964000 9626000 35263000 0 0 0 0 0 0 0 0 0 0 0 0 25609 1937;2178 23358 215906;215907;215908 172488;172489;172490 172490 3 ITEYQHEAR Unmodified 1145.5465 0.54653606 4672 Q9NVM9 ASUN Protein asunder homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 14 1 1 1 1 1 1 1 1 2 2 2 12.078 12.232 2;3 0.0093978 9632 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 51.268 39.735 74120000 0 0 0 3527100 3244500 5187300 3150600 3924000 2804000 6086400 0 9331800 7821100 11687000 17356000 25610 4672 23359 215909;215910;215911;215912;215913;215914;215915;215916;215917;215918;215919;215920;215921;215922 172491;172492;172493;172494;172495 172494 5 ITFDAFPGEPDK Unmodified 1335.6347 0.63468237 2205 Q12904 AIMP1 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1;Endothelial monocyte-activating polypeptide 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.857 76.013 2 3.7233E-06 87687 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 111.27 78.003 259450000 0 0 0 0 0 18658000 16642000 17584000 13174000 24865000 33353000 39921000 17241000 23188000 54822000 25611 2205 23360 215923;215924;215925;215926;215927;215928;215929;215930;215931;215932;215933;215934 172496;172497;172498;172499;172500;172501;172502;172503;172504;172505;172506;172507 172505 12 ITFHGEGDQEPGLEPGDIIIVLDQK Unmodified 2719.3705 0.37047576 1303 P31689 DNAJA1 DnaJ homolog subfamily A member 1 yes yes 0 0 0 By MS/MS 2 0 1 1 97.299 89.168 4 0.0039856 115188 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 31.6 24.802 11290000 11290000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25612 1303 23361 215935 172508 172508 1 ITFLLQAIR Unmodified 1073.6597 0.65971533 149 O00410 IPO5 Importin-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 87.243 87.389 2 0.0064261 100979 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.109 53.581 24620000 0 0 0 0 0 5074700 1535000 850520 2015500 2747600 1538500 2177300 0 2117700 6562700 25613 149 23362 215936;215937;215938;215939;215940;215941;215942;215943;215944 172509;172510;172511 172510 3 ITFPCISDMIKHYQK Unmodified 1879.9325 0.93246107 852 P07948 LYN Tyrosine-protein kinase Lyn yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 84.452 80.963 3 0.0058783 98279 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 49.929 43.897 254790000 0 243920000 10864000 0 0 0 0 0 0 0 0 0 0 0 0 25614 852 23363 215945;215946;215947 172512;172513 172513 2 ITFPREGDETPNSIPADIVFIIK Unmodified 2571.3585 0.35845451 4868 Q9UDY4 DNAJB4 DnaJ homolog subfamily B member 4 yes yes 0 0 1 By MS/MS 2 0 1 1 98.746 90.616 3 0.0016126 116916 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 23.913 16.637 8326300 8326300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25615 4868 23364 215948 172514 172514 1 ITFPSSQQEAQNR Unmodified 1504.727 0.72701962 3559 Q8WVB6 CHTF18 Chromosome transmission fidelity protein 18 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.443 43.617 2 1.2336E-32 48956 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 199.11 175.79 313560000 0 0 0 20024000 15921000 20875000 23054000 24505000 16901000 25381000 35150000 36869000 29078000 30549000 35259000 25616 3559 23365 215949;215950;215951;215952;215953;215954;215955;215956;215957;215958;215959;215960 172515;172516;172517;172518;172519;172520;172521;172522;172523;172524 172515 10 ITFQESK Unmodified 851.43888 0.43888309 4573 Q9NQR4 NIT2 Omega-amidase NIT2 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 28.934 24.586 2 0.03416 32601 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.265 44.413 870140000 0 870140000 0 0 0 0 0 0 0 0 0 0 0 0 0 25617 4573 23366 215961;215962 172525;172526;172527 172526 3 ITFSDVRPNQQEYK Unmodified 1723.8529 0.85294842 3134 Q86TC9 MYPN Myopalladin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 2 16 1 1 1 2 1 1 1 1 2 1 1 1 2 2 52.414 51.871 2;3 0.00020029 57287 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.004 68.665 463060000 23562000 0 4770700 25239000 34226000 34946000 33654000 44575000 30391000 41425000 33919000 36480000 31000000 36991000 51885000 25618 3134 23367 215963;215964;215965;215966;215967;215968;215969;215970;215971;215972;215973;215974;215975;215976;215977;215978;215979;215980 172528;172529;172530;172531;172532;172533;172534;172535;172536;172537;172538;172539;172540;172541;172542;172543;172544;172545;172546;172547 172533 18 ITFSNLGEK Unmodified 1007.5288 0.52876073 4750 Q9NYU1 UGGT2 UDP-glucose:glycoprotein glucosyltransferase 2 yes yes 0 0 0 By MS/MS 2 0 1 1 58.874 53.031 2 0.023317 68340 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.21 72.547 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25619 4750 23368 215981 172548 172548 1 ITFTALSSEK Unmodified 1095.5812 0.58119023 2051 Q01167 FOXK2 Forkhead box protein K2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 62.876 61.207 2 0.0026251 78791 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.62 61.394 169390000 24461000 64833000 5079900 0 5947400 7849700 6112200 13215000 4298100 11034000 0 7524800 10808000 8225900 0 25620 2051 23369 215982;215983;215984;215985;215986;215987;215988;215989;215990;215991;215992;215993;215994 172549;172550;172551;172552;172553;172554;172555;172556;172557;172558;172559 172552 8 ITGCASPGK Unmodified 889.43275 0.43275186 1642 P50991 CCT4 T-complex protein 1 subunit delta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.94 3.58 1 3 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7.7813 7.266 2 0.013737 5679 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 59.35 38.085 1862000000 227990000 1475200000 13032000 5469400 7635300 14100000 9967900 11651000 10463000 10229000 24253000 12605000 9391300 11198000 18805000 25621 1642 23370 215995;215996;215997;215998;215999;216000;216001;216002;216003;216004;216005;216006;216007;216008;216009;216010 172560;172561;172562;172563 172562 4 ITGDPYK Unmodified 792.40177 0.4017693 3737 Q96AE4 FUBP1 Far upstream element-binding protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.014 18.202 2 0.050331 18320 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 62.717 33.379 635400000 0 0 0 31478000 30846000 34980000 42536000 30924000 31867000 53608000 59665000 84728000 40312000 66510000 127950000 25622 3737 23371 216011;216012;216013;216014;216015;216016;216017;216018;216019;216020;216021;216022 172564 172564 1 ITGEAFVQFASQELAEK Unmodified 1866.9363 0.9363437 1692 P52597 HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 7 2 4 1 96.371 90.85 2;3 9.1033E-226 114454 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 257.76 239.13 855470000 281250000 567440000 6782300 0 0 0 0 0 0 0 0 0 0 0 0 25623 1692 23372 216023;216024;216025;216026;216027;216028;216029 172565;172566;172567;172568;172569;172570;172571 172565 7 ITGEIMHALK Unmodified 1111.606 0.6059652 4585 Q9NR12 PDLIM7 PDZ and LIM domain protein 7 yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 60.878 53.829 2 0.039944 73331 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.219 52.045 52475000 32379000 20095000 0 0 0 0 0 0 0 0 0 0 0 0 0 25624 4585 23373 216030;216031 172572 172572 0 ITGEIMHALK Oxidation (M) 1127.6009 0.60087982 4585 Q9NR12 PDLIM7 PDZ and LIM domain protein 7 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 39.372 34.315 2 0.020283 43130 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 62.546 43.069 11726000 8162200 0 3563700 0 0 0 0 0 0 0 0 0 0 0 0 25625 4585 23373 216032;216033 172573 172573 5986 1 ITGIEPLPGENK Unmodified 1266.682 0.68196691 2734 Q5JSH3 WDR44 WD repeat-containing protein 44 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 58.613 57.282 2 8.3058E-15 69838 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 145.89 116.08 1324500000 19495000 1103000000 4871000 8860100 7938300 11393000 10602000 10757000 8000300 13543000 23956000 24013000 10650000 21648000 45728000 25626 2734 23374 216034;216035;216036;216037;216038;216039;216040;216041;216042;216043;216044;216045;216046;216047;216048;216049 172574;172575;172576;172577;172578;172579;172580;172581;172582;172583 172577 9 ITGNMGLAMK Oxidation (M) 1050.5202 0.52018666 1136 P22307 SCP2 Non-specific lipid-transfer protein yes yes 0 1 0 By MS/MS 2 0 1 1 35.649 30.802 2 0.016731 40291 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.246 41.723 10960000 0 10960000 0 0 0 0 0 0 0 0 0 0 0 0 0 25627 1136 23375 216050 172584 172584 1630 1 ITGPPERDDPYPVLFR Unmodified 1870.9577 0.95774784 2863 Q69YN4 KIAA1429 Protein virilizer homolog yes yes 0 0 1 By MS/MS By MS/MS By matching 10 0 3 1 1 1 77.12 77.214 3 0.021885 89046 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 29.733 13.849 11951000 0 0 0 0 0 4053100 0 2890100 0 5008100 0 0 0 0 0 25628 2863 23376 216051;216052;216053 172585 172585 1 ITGQLESLESR Unmodified 1231.6408 0.64083038 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 50.095 50.1 2 0.0010987 56540 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 89.171 46.981 34635000 0 0 0 3307400 4770700 0 0 0 0 9553400 0 0 9251600 0 7751500 25629 5049 23377 216054;216055;216056;216057;216058 172586;172587;172588 172586 3 ITHCPTLLTR Unmodified 1210.6492 0.64922699 28 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 38.933 39.182 3 0.036758 42561 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 30.004 18.84 64409000 0 0 0 0 1974900 6913900 3498100 0 4248900 5585000 8002200 11077000 5729800 8351600 9027500 25630 28 23378 216059;216060;216061;216062;216063;216064;216065;216066;216067;216068 172589 172589 1 ITHLSTLQVGSLNVK Unmodified 1608.9199 0.91990577 2635 Q16775 HAGH Hydroxyacylglutathione hydrolase, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 78.389 70.258 3 0.00033299 92330 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.26 63.822 59458000 59458000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25631 2635 23379 216069 172590 172590 1 ITHPTDTSNFDPVDPDK Unmodified 1897.8694 0.86938634 700 O95835 LATS1 Serine/threonine-protein kinase LATS1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.86 3.4 1 1 5 2 1 1 1 1 1 53.319 51.38 3 9.4631E-08 57500 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 59.345 52.764 77728000 0 41301000 0 8934800 6574700 0 11077000 9839500 0 0 0 0 0 0 0 25632 700 23380 216070;216071;216072;216073;216074;216075;216076 172591;172592;172593;172594;172595;172596;172597 172593 7 ITHPVYSLYFPEEK Unmodified 1721.8665 0.86647322 4887 Q9UGP8 SEC63 Translocation protein SEC63 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 82.953 74.823 3 0.0055204 97946 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.621 40.331 9257000 9257000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25633 4887 23381 216077 172598 172598 1 ITHQEMIK Oxidation (M) 1014.5168 0.51681584 3860 Q96GX9 APIP Methylthioribulose-1-phosphate dehydratase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 9.9007 6.7762 2 0.0021856 8705 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 122.19 84.054 62878000 24558000 23175000 15146000 0 0 0 0 0 0 0 0 0 0 0 0 25634 3860 23382 216078;216079;216080 172599;172600;172601;172602 172601 5371 4 ITHQEMIK Unmodified 998.5219 0.52190122 3860 Q96GX9 APIP Methylthioribulose-1-phosphate dehydratase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 20.873 17.162 2 0.0025156 21382 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 122.19 82.541 189930000 71640000 78461000 39826000 0 0 0 0 0 0 0 0 0 0 0 0 25635 3860 23382 216081;216082;216083 172603;172604 172604 1 ITHQEVDSR Unmodified 1083.5309 0.530886 3530 Q8WTS6 SETD7 Histone-lysine N-methyltransferase SETD7 yes yes 0 0 0 By matching By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 6.7648 6.8388 2 0.0080246 4311 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.816 35.46 12557000 0 0 0 892330 851620 836430 0 0 0 0 3881500 0 0 0 6094800 25636 3530 23383 216084;216085;216086;216087;216088 172605 172605 1 ITHQIVDRPGQQTSVIGR Unmodified 2004.0865 0.086470602 167 O00541 PES1 Pescadillo homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 30 2 2 3 2 2 2 3 2 3 3 3 3 40.942 41.161 2;3;4 5.3926E-37 45763 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 137.44 127.88 2427000000 0 0 0 136270000 119340000 221440000 201630000 130620000 156570000 236030000 151550000 226180000 300070000 184250000 363070000 25637 167 23384 216089;216090;216091;216092;216093;216094;216095;216096;216097;216098;216099;216100;216101;216102;216103;216104;216105;216106;216107;216108;216109;216110;216111;216112;216113;216114;216115;216116;216117;216118 172606;172607;172608;172609;172610;172611;172612;172613;172614;172615;172616;172617;172618;172619;172620;172621;172622;172623;172624;172625;172626;172627;172628;172629 172614 19 ITIADCGQLE Unmodified 1118.5278 0.52777445 1931 P62937 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.22 3.97 1 8 2 12 4 4 3 1 1 1 1 1 1 1 1 1 1 1 1 64.956 63.614 1;2 1.0617E-05 78048 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 137.18 127.11 2286500000 700530000 139820000 54183000 17648000 21179000 23775000 23295000 31230000 23865000 25684000 244790000 203980000 24023000 156990000 595520000 25638 1931 23385 216119;216120;216121;216122;216123;216124;216125;216126;216127;216128;216129;216130;216131;216132;216133;216134;216135;216136;216137;216138;216139;216140;216141 172630;172631;172632;172633;172634;172635;172636;172637;172638;172639;172640;172641;172642;172643;172644;172645 172641 15 ITIGQAPTEK Unmodified 1056.5815 0.58152458 953 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.48 1 2 1 12 2 2 1 1 1 1 1 1 1 1 1 2 1 42.096 41.529 2 4.5317E-10 39670 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 164.71 104.06 2158800000 77337000 1361000000 0 45488000 36052000 63284000 58219000 62452000 54942000 72640000 55951000 84589000 0 76144000 110690000 25639 953 23386 216142;216143;216144;216145;216146;216147;216148;216149;216150;216151;216152;216153;216154;216155;216156;216157 172646;172647;172648;172649;172650;172651;172652;172653;172654;172655;172656;172657;172658;172659;172660;172661;172662;172663 172652 6 ITIGQGNTEK Unmodified 1059.556 0.55603812 2971 Q6UB35 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 26.054 21.851 2 0.003255 28835 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.624 25.954 27258000 0 27258000 0 0 0 0 0 0 0 0 0 0 0 0 0 25640 2971 23387 216158 172664 172664 1 ITINPGCVVVDGMPPGVSFK Oxidation (M) 2102.054 0.054032765 1977 P78347 GTF2I General transcription factor II-I yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 2 1 1 1 85.093 85.245 2 1.8776E-05 98401 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.831 47.572 30045000 0 0 0 0 0 0 0 0 0 7970000 4997300 3874700 0 0 13203000 25641 1977 23388 216159;216160;216161;216162;216163 172665;172666;172667;172668;172669 172667 3182 5 ITINSHTTAGEVVEK Unmodified 1597.8312 0.83115034 4530 Q9HD67 MYO10 Unconventional myosin-X yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 48.077 42.277 3 0.00014877 53315 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 75.383 61.3 38065000 12169000 15957000 9939100 0 0 0 0 0 0 0 0 0 0 0 0 25642 4530 23389 216164;216165;216166 172670;172671;172672;172673;172674 172674 5 ITIQIPK Unmodified 811.51674 0.51673948 2558 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.256 64.347 2 0.04604 73518 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 66.087 15.78 134390000 0 0 0 7257500 7521100 9250700 8563700 8902200 10751000 14240000 11530000 15245000 10987000 10911000 19229000 25643 2558 23390 216167;216168;216169;216170;216171;216172;216173;216174;216175;216176;216177;216178 172675;172676 172675 2 ITISPLQELTLYNPER Unmodified 1886.0149 0.014928368 153 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 yes yes 0 0 0 By MS/MS 10 0 1 1 92.903 93.041 2 0.00031853 107837 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.362 69.161 1621300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1621300 25644 153 23391 216179 172677 172677 1 ITITNDK Unmodified 803.43888 0.43888309 934;908;1743;1047 P11142;P0DMV9;P0DMV8;P17066;P54652 HSPA8;HSPA1B;HSPA1A;HSPA6;HSPA2 Heat shock cognate 71 kDa protein;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6;Heat shock-related 70 kDa protein 2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.82 3.58 2 5 2 24 4 3 2 2 2 2 2 2 2 2 2 2 2 2 2 24.51 24.369 1;2 2.443E-09 18303 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 187.34 73.151 20751000000 1842500000 12582000000 3269800 422480000 330110000 398910000 364630000 347450000 263240000 488640000 780070000 717300000 473620000 585890000 1151000000 25645 934;908;1047;1743 23392 216180;216181;216182;216183;216184;216185;216186;216187;216188;216189;216190;216191;216192;216193;216194;216195;216196;216197;216198;216199;216200;216201;216202;216203;216204;216205;216206;216207;216208;216209;216210;216211;216212 172678;172679;172680;172681;172682;172683;172684;172685;172686;172687;172688;172689;172690;172691;172692;172693;172694;172695;172696;172697;172698;172699 172693 18 ITITNDQNR Unmodified 1073.5465 0.54653606 932 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.569 21.774 2 8.7544E-15 21750 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 187.55 128.63 4242500000 0 0 0 220290000 164810000 280280000 234440000 356470000 189930000 346240000 486820000 574560000 400410000 386600000 601710000 25646 932 23393 216213;216214;216215;216216;216217;216218;216219;216220;216221;216222;216223;216224 172700;172701;172702;172703;172704;172705;172706;172707;172708;172709;172710;172711;172712 172704 10 ITITNDQNRLTPEEIER Unmodified 2041.044 0.043996665 932 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 4 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 62.564 61.79 3 0.00013212 76650 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 71.685 54.806 170450000 5119900 0 24515000 7826200 5014900 5272700 11079000 12456000 13871000 14366000 17599000 17388000 7112000 7990400 20839000 25647 932 23394 216225;216226;216227;216228;216229;216230;216231;216232;216233;216234;216235;216236;216237;216238;216239;216240 172713;172714;172715;172716;172717;172718;172719;172720;172721;172722;172723;172724;172725;172726;172727 172723 14 ITITNDQNRLTPEEIERMVNDAEK Unmodified 2828.3974 0.39743557 932 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 2 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 3 1 88.826 84.118 3;4 0.0006673 105768 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 40.533 20.334 418400000 267620000 148480000 2294100 0 0 0 0 0 0 0 0 0 0 0 0 25648 932 23395 216241;216242;216243;216244;216245 172728;172729;172730;172731 172728 3 ITKPGSIDSNNQLFAPGGR Unmodified 1971.0174 0.017387984 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 59.383 59.492 2;3 3.5356E-45 67896 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 127.02 100.89 2590400000 0 0 0 155090000 180340000 91356000 236170000 245040000 109750000 214310000 242230000 367840000 249800000 205580000 292880000 25649 2102 23396 216246;216247;216248;216249;216250;216251;216252;216253;216254;216255;216256;216257;216258;216259;216260;216261;216262;216263;216264;216265;216266;216267;216268;216269 172732;172733;172734;172735;172736;172737;172738;172739;172740;172741;172742;172743;172744;172745;172746;172747;172748 172735 17 ITLDNAYMEK Oxidation (M) 1212.5696 0.56963927 1000 P14618 PKM Pyruvate kinase PKM yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.59 3.51 1 17 11 12 4 22 3 1 1 1 1 1 1 1 1 1 1 1 1 50.431 47.57 2 2.7689E-06 58069 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 148.14 133.47 6497000000 380200000 4858000000 88943000 54077000 58604000 53149000 91780000 89793000 70542000 80200000 154860000 212950000 32100000 66189000 205660000 25650 1000 23397 216270;216271;216272;216273;216274;216275;216276;216277;216278;216279;216280;216281;216282;216283;216284;216285;216286;216287;216288;216289;216290;216291;216292;216293;216294;216295;216296;216297;216298;216299;216300;216301;216302;216303;216304;216305;216306;216307;216308;216309;216310 172749;172750;172751;172752;172753;172754;172755;172756;172757;172758;172759;172760;172761;172762;172763;172764;172765;172766;172767;172768;172769;172770;172771;172772;172773;172774;172775;172776;172777;172778;172779;172780;172781;172782;172783;172784;172785;172786;172787;172788;172789;172790;172791;172792;172793;172794;172795;172796;172797;172798;172799;172800;172801 172762 1357 52 ITLDNAYMEK Unmodified 1196.5747 0.57472465 1000 P14618 PKM Pyruvate kinase PKM yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.39 3.7 5 1 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 57.698 55.733 2 9.1758E-06 68861 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 147.51 114.67 16656000000 420200000 13037000000 3126100 119490000 122620000 164630000 179810000 238620000 137460000 245980000 436760000 434200000 80937000 239340000 795820000 25651 1000 23397 216311;216312;216313;216314;216315;216316;216317;216318;216319;216320;216321;216322;216323;216324;216325;216326;216327;216328 172802;172803;172804;172805;172806;172807;172808;172809;172810;172811;172812;172813;172814;172815;172816;172817;172818;172819;172820;172821;172822 172811 19 ITLECLPQNVGFYK Unmodified 1680.8545 0.85452832 3814 Q96EK6 GNPNAT1 Glucosamine 6-phosphate N-acetyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 83.7 83.745 2 2.5418E-16 97130 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 146.11 127.84 61254000 0 0 0 0 6601900 5612600 0 0 0 11939000 16150000 20952000 0 0 0 25652 3814 23398 216329;216330;216331;216332;216333 172823;172824;172825 172825 3 ITLEGPTEDVNVAQEQIEGMVK Oxidation (M) 2415.1839 0.18392054 2033 Q00341 HDLBP Vigilin yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 6.86 3.64 1 2 4 3 1 1 1 1 82.339 80.807 2;3 2.1168E-85 95903 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 151.58 144.13 400100000 0 310540000 0 0 0 7369100 0 0 0 39863000 15646000 0 0 0 26682000 25653 2033 23399 216334;216335;216336;216337;216338;216339;216340 172826;172827;172828;172829;172830;172831;172832;172833;172834 172831 3288 9 ITLEGPTEDVNVAQEQIEGMVK Unmodified 2399.189 0.18900592 2033 Q00341 HDLBP Vigilin yes yes 0 0 0 By MS/MS By MS/MS 2.4 0.49 3 2 4 1 91.08 87.339 2;3 8.859E-85 108231 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 147.49 133.33 1000700000 0 997730000 3001100 0 0 0 0 0 0 0 0 0 0 0 0 25654 2033 23399 216341;216342;216343;216344;216345 172835;172836;172837;172838;172839;172840;172841;172842 172835 8 ITLETDEDMVTEIRLK Unmodified 1904.9765 0.97649395 2528 Q15393 SF3B3 Splicing factor 3B subunit 3 yes yes 0 0 1 By MS/MS By MS/MS 2.67 0.471 1 2 2 1 85.456 80.456 3 3.6541E-42 82440 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 149.44 133.3 58571000 56378000 2192800 0 0 0 0 0 0 0 0 0 0 0 0 0 25655 2528 23400 216346;216347;216348 172843;172844;172845;172846 172843 4 ITLEVAK Unmodified 772.46945 0.46945494 1398 P38606 ATP6V1A V-type proton ATPase catalytic subunit A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 44.647 43.279 2 0.036349 55927 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.614 10.575 963610000 55242000 552980000 20579000 24686000 12380000 40500000 20196000 18043000 18394000 36297000 37875000 38444000 0 33356000 54641000 25656 1398 23401 216349;216350;216351;216352;216353;216354;216355;216356;216357;216358;216359;216360;216361;216362;216363 172847;172848;172849 172847 3 ITLFLEEDK Unmodified 1106.5859 0.58594126 4577 Q9NQW6 ANLN Actin-binding protein anillin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.414 76.472 2 0.0038222 87653 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.819 49.156 117410000 0 0 0 4423500 5170100 9242000 8768000 7499300 9604700 13169000 13772000 11766000 7794600 10114000 16084000 25657 4577 23402 216364;216365;216366;216367;216368;216369;216370;216371;216372;216373;216374;216375 172850;172851;172852;172853;172854;172855;172856;172857;172858;172859;172860;172861 172853 12 ITLNLPASTPVRK Unmodified 1408.8402 0.84019889 3903 Q96K76 USP47 Ubiquitin carboxyl-terminal hydrolase 47 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.101 65.188 3 0.0087605 75027 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 25.122 15.334 82668000 0 0 0 3679400 2158400 8818200 4967200 5370900 5263000 6481700 7444600 7934200 6190300 7080700 17280000 25658 3903 23403 216376;216377;216378;216379;216380;216381;216382;216383;216384;216385;216386;216387 172862;172863;172864;172865;172866;172867 172866 6 ITLPSHPALGTPK Unmodified 1330.7609 0.76088593 4325 Q9H0E3 SAP130 Histone deacetylase complex subunit SAP130 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.428 59.537 3 0.0017229 67658 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 56.493 51.495 255310000 0 0 0 18156000 14695000 21005000 21554000 16920000 14485000 24458000 19821000 24412000 19320000 20445000 40039000 25659 4325 23404 216388;216389;216390;216391;216392;216393;216394;216395;216396;216397;216398;216399 172868;172869;172870;172871;172872;172873;172874;172875;172876;172877 172870 7 ITLPSIGR Unmodified 855.5178 0.51780212 5301 Q9Y6Y8 SEC23IP SEC23-interacting protein yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.552 67.633 2 0.041524 77503 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 49.933 2.1834 113960000 0 0 0 7773800 1094800 9070200 8279800 8545700 5868900 10946000 9648700 13139000 10090000 10889000 18615000 25660 5301 23405 216400;216401;216402;216403;216404;216405;216406;216407;216408;216409;216410;216411 172878 172878 1 ITLPVDFVTADK Unmodified 1317.718 0.71801807 733 P00558 PGK1 Phosphoglycerate kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.27 3.88 1 14 3 12 5 9 4 1 1 1 1 1 1 1 1 1 1 1 1 88.843 86.953 2;3 2.4589E-05 99931 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 118.4 87.33 26064000000 857710000 22919000000 556210000 13293000 10500000 22028000 16449000 16600000 21449000 28335000 245820000 182790000 16498000 199600000 957280000 25661 733 23406 216412;216413;216414;216415;216416;216417;216418;216419;216420;216421;216422;216423;216424;216425;216426;216427;216428;216429;216430;216431;216432;216433;216434;216435;216436;216437;216438;216439;216440;216441 172879;172880;172881;172882;172883;172884;172885;172886;172887;172888;172889;172890;172891;172892;172893;172894;172895;172896;172897;172898;172899;172900;172901;172902;172903;172904;172905;172906;172907;172908;172909;172910;172911;172912;172913;172914;172915 172882 37 ITLPVDFVTADKFDENAK Unmodified 2022.031 0.030972363 733 P00558 PGK1 Phosphoglycerate kinase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 4.65 3.57 1 9 6 7 6 8 2 1 2 1 1 2 89.925 87.775 2;3 4.4533E-76 109120 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 173.03 156.63 5939900000 190320000 5153400000 271250000 0 0 0 0 0 0 5764400 40057000 24056000 0 17521000 237580000 25662 733 23407 216442;216443;216444;216445;216446;216447;216448;216449;216450;216451;216452;216453;216454;216455;216456;216457;216458;216459;216460;216461;216462;216463;216464 172916;172917;172918;172919;172920;172921;172922;172923;172924;172925;172926;172927;172928;172929;172930;172931;172932;172933;172934;172935;172936;172937 172918 20 ITLQDVVSHSK Unmodified 1225.6667 0.6666512 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.57 3.6 8 3 24 5 4 2 2 2 2 2 2 2 2 2 2 2 2 2 62.576 60.972 2;3 1.6046E-13 69089 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 166.33 113.61 7440800000 2163500000 997060000 446100000 255530000 268510000 390120000 320810000 219110000 248070000 346080000 336720000 359610000 278720000 296620000 514240000 25663 1518 23408 216465;216466;216467;216468;216469;216470;216471;216472;216473;216474;216475;216476;216477;216478;216479;216480;216481;216482;216483;216484;216485;216486;216487;216488;216489;216490;216491;216492;216493;216494;216495;216496;216497;216498;216499 172938;172939;172940;172941;172942;172943;172944;172945;172946;172947;172948;172949;172950;172951;172952;172953;172954;172955;172956;172957;172958;172959;172960;172961;172962;172963;172964;172965;172966;172967;172968;172969;172970;172971;172972;172973;172974;172975;172976;172977;172978;172979;172980;172981;172982;172983;172984;172985 172942 41 ITLSSSSEEYQK Unmodified 1370.6565 0.65654002 4330 Q9H0J9 PARP12 Poly [ADP-ribose] polymerase 12 yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 37.47 37.577 2 0.0062127 40523 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.762 39.807 36057000 0 0 0 3803700 1987700 5639000 0 3738700 3500000 0 6265200 0 0 4361900 6761200 25664 4330 23409 216500;216501;216502;216503;216504;216505;216506;216507 172986;172987;172988;172989;172990 172987 5 ITLTHTLYDVK Unmodified 1302.7184 0.71835242 4576 Q9NQT8 KIF13B Kinesin-like protein KIF13B yes yes 0 0 0 By MS/MS 2 0 1 1 71.768 63.53 3 0.0037754 84395 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.64 43.411 19434000 19434000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25665 4576 23410 216508 172991 172991 1 ITLTSDPR Unmodified 901.4869 0.48689592 1863 P61960 UFM1 Ubiquitin-fold modifier 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 32.357 33.079 2 0.036695 35042 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.736 23.481 33733000 0 0 0 0 0 0 0 0 0 0 0 8812600 0 0 24921000 25666 1863 23411 216509;216510 172992 172992 1 ITLTSDPRLPYK Unmodified 1402.782 0.78201531 1863 P61960 UFM1 Ubiquitin-fold modifier 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.2 3.92 3 2 1 1 1 1 1 66.7 63.292 3 0.015877 84569 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.255 27.322 253200000 132510000 56115000 24688000 0 0 0 0 10098000 0 0 0 0 0 0 29787000 25667 1863 23412 216511;216512;216513;216514;216515 172993;172994;172995;172996;172997 172995 2 ITLVSAAPGK Unmodified 955.57023 0.57023162 4554 Q9NPJ3 ACOT13 Acyl-coenzyme A thioesterase 13;Acyl-coenzyme A thioesterase 13, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 47.703 46.414 2 0.011538 59314 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.879 25.136 669580000 148070000 433370000 8463100 4703100 2876000 7919900 4859700 4996100 2577800 6837600 9350900 7842600 3965500 6005900 17742000 25668 4554 23413 216516;216517;216518;216519;216520;216521;216522;216523;216524;216525;216526;216527;216528;216529;216530;216531 172998;172999;173000;173001;173002;173003;173004;173005;173006 173000 8 ITLVSSGSGTMGAAK Oxidation (M) 1394.7075 0.70752973 565 O75955 FLOT1 Flotillin-1 yes yes 0 1 0 By MS/MS 2 0 1 1 42.126 37.03 2 0.012533 48244 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 46.796 15.036 9464000 0 9464000 0 0 0 0 0 0 0 0 0 0 0 0 0 25669 565 23414 216532 173007 173007 726 1 ITMELFSNIVPR Oxidation (M) 1434.7541 0.754086 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By matching 10 0 5 1 1 1 1 1 82.753 82.882 2 0.0031273 95941 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 56.548 43.971 12354000 0 0 0 0 0 2857800 0 1844900 1549700 3099900 0 3001700 0 0 0 25670 1601 23415 216533;216534;216535;216536;216537 173008;173009;173010 173008 2579 3 ITMIAEPLEK Unmodified 1143.6209 0.62094656 2481 Q15029 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 67.289 66.638 2 0.0015504 85306 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.07 74.722 1672200000 0 1058600000 0 19367000 23662000 28583000 24695000 32055000 21715000 39449000 79186000 78962000 38459000 63629000 163810000 25671 2481 23416 216538;216539;216540;216541;216542;216543;216544;216545;216546;216547;216548;216549;216550;216551 173011;173012;173013;173014;173015;173016;173017;173018;173019;173020;173021;173022;173023;173024 173014 10 ITMIAEPLEK Oxidation (M) 1159.6159 0.61586118 2481 Q15029 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.47 2 1 14 1 1 1 2 1 2 2 1 1 2 1 51.116 50.972 2 0.0016694 57310 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 82.645 35.071 192920000 0 0 4390700 0 10918000 16476000 13172000 14549000 15213000 0 22709000 31962000 24060000 18749000 20725000 25672 2481 23416 216552;216553;216554;216555;216556;216557;216558;216559;216560;216561;216562;216563;216564;216565;216566 173025;173026;173027;173028;173029;173030;173031;173032;173033;173034 173031 4089 9 ITMQNLNDRLASYLEK Oxidation (M) 1923.9724 0.97241163 73;981 CON__P13646-1;P13646;CON__ENSEMBL:ENSP00000377550 KRT13 Keratin, type I cytoskeletal 13 no no 0 1 1 By matching By MS/MS 10 0 2 1 1 74.72 74.889 3 0.00090938 86264 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 47.217 19.954 + 12071000 0 0 0 0 0 0 3032700 9038000 0 0 0 0 0 0 0 25673 73;981 23417 216567;216568 173035 173035 94 1 ITNDCPEHLESIDVMCQVLTDLIDEEVK Unmodified 3314.5356 0.53564489 2827 Q5VWZ2 LYPLAL1 Lysophospholipase-like protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 103.4 95.272 3 3.851E-56 122467 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 117.03 107.15 18142000 18142000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25674 2827 23418 216569 173036;173037 173036 2 ITNDFYPEEDGK Unmodified 1426.6252 0.62523989 1776 P55884 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 50.214 48.82 2 1.3163E-05 64351 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.39 99.223 1160200000 20779000 731360000 0 17813000 21013000 20382000 35797000 25795000 18651000 25703000 46389000 55474000 29655000 48268000 63076000 25675 1776 23419 216570;216571;216572;216573;216574;216575;216576;216577;216578;216579;216580;216581;216582;216583;216584;216585 173038;173039;173040;173041;173042;173043;173044;173045;173046;173047;173048;173049;173050;173051;173052;173053;173054 173047 17 ITNLTQQLEQASIVK Unmodified 1684.9359 0.93594977 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.74 2.92 3 16 1 1 1 2 2 1 1 2 1 1 2 1 1 1 1 80.719 80.341 2;3 0 93010 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 292.73 265.08 823150000 0 214540000 2295400 56685000 39765000 32822000 29122000 142580000 30529000 41747000 57138000 68813000 40868000 27681000 38567000 25676 1029 23420 216586;216587;216588;216589;216590;216591;216592;216593;216594;216595;216596;216597;216598;216599;216600;216601;216602;216603;216604 173055;173056;173057;173058;173059;173060;173061;173062;173063;173064;173065;173066;173067;173068;173069;173070;173071 173063 16 ITNLTQQLEQASIVKK Unmodified 1813.0309 0.030912783 1029 P15924 DSP Desmoplakin yes yes 0 0 1 By MS/MS 10 0 1 1 73.417 73.602 3 1.034E-05 84705 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 77.324 72.707 11971000 0 0 0 0 0 0 0 11971000 0 0 0 0 0 0 0 25677 1029 23421 216605 173072;173073 173072 2 ITNNINVLIK Unmodified 1140.6867 0.68665836 4278 Q9BZZ5 API5 Apoptosis inhibitor 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.69 3.47 2 2 9 2 2 1 1 1 1 1 1 1 1 1 70.473 68.996 2 1.571E-11 88130 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 160.63 111.53 1285400000 229810000 667070000 0 0 0 43275000 30391000 0 27340000 57495000 47747000 45148000 31645000 35162000 70314000 25678 4278 23422 216606;216607;216608;216609;216610;216611;216612;216613;216614;216615;216616;216617;216618 173074;173075;173076;173077;173078;173079 173075 5 ITNNIVYFLPR Unmodified 1348.7503 0.75032125 3974 Q96RS0 TGS1 Trimethylguanosine synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 86.338 86.472 2 4.7881E-05 100257 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 115.71 84.917 30501000 0 0 0 0 0 3548600 1670600 2547600 0 4633700 2881900 3443800 2073200 2259200 7442800 25679 3974 23423 216619;216620;216621;216622;216623;216624;216625;216626;216627;216628;216629 173080;173081;173082;173083;173084;173085;173086;173087;173088;173089;173090 173081 11 ITNQVHGLK Unmodified 1008.5716 0.5716286 1668 P51665 PSMD7 26S proteasome non-ATPase regulatory subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 17.755 17.943 2 0.0040136 17301 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 98.629 53.908 244470000 0 0 0 12750000 15324000 20611000 6626900 6431600 6853900 32433000 33742000 66363000 12473000 10601000 20257000 25680 1668 23424 216630;216631;216632;216633;216634;216635;216636;216637;216638;216639;216640;216641 173091;173092;173093;173094;173095;173096;173097;173098;173099 173097 8 ITNQVIYLNPPIEECR Unmodified 1957.9931 0.99314707 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.22 80.279 2 1.8979E-27 92555 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 131.06 116.71 61626000 0 0 0 2138400 3113700 4875900 2501300 3497100 2881500 5927400 5534900 10203000 3849700 6615000 10488000 25681 2392 23425 216642;216643;216644;216645;216646;216647;216648;216649;216650;216651;216652;216653 173100;173101;173102;173103;173104;173105;173106;173107;173108;173109;173110;173111;173112 173103 13 ITNSLTVLCSEK Unmodified 1363.7017 0.70171607 547 O75822 EIF3J Eukaryotic translation initiation factor 3 subunit J yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 62.557 61.162 2 9.9219E-16 77987 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 152.07 108.58 1533700000 38298000 1296000000 9921100 7542000 0 11212000 9341800 7969700 6703400 13692000 30080000 27150000 13931000 18104000 43760000 25682 547 23426 216654;216655;216656;216657;216658;216659;216660;216661;216662;216663;216664;216665;216666;216667;216668 173113;173114;173115;173116;173117;173118;173119;173120;173121;173122;173123;173124;173125;173126;173127;173128;173129;173130;173131;173132 173117 17 ITPAHDQNDYEVGQR Unmodified 1741.802 0.80197548 1210 P26640 VARS Valine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 1 1 2 1 2 2 2 2 2 2 2 27.942 28.201 2;3 6.0775E-31 30556 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 134.9 129.12 668530000 0 0 0 24252000 22489000 80186000 28041000 26849000 33228000 70880000 84697000 73274000 47064000 49590000 127970000 25683 1210 23427 216669;216670;216671;216672;216673;216674;216675;216676;216677;216678;216679;216680;216681;216682;216683;216684;216685;216686;216687;216688 173133;173134;173135;173136;173137;173138;173139;173140;173141;173142;173143 173138 6 ITPAMAAR Unmodified 829.44801 0.44800799 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 25.316 25.505 2 0.011827 27250 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 76.035 37.013 228860000 0 0 0 25153000 14980000 22399000 13978000 21632000 9200100 18533000 19906000 22323000 0 18843000 41915000 25684 3119 23428 216689;216690;216691;216692;216693;216694;216695;216696;216697;216698;216699 173144;173145;173146 173146 2 ITPDGITK Unmodified 843.47018 0.47018322 2439 Q14694 USP10 Ubiquitin carboxyl-terminal hydrolase 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 27.447 26.799 2 0.01951 33420 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.794 51.3 313200000 7657300 152940000 0 11163000 10054000 13607000 12882000 9515600 9377600 17075000 21750000 17777000 14081000 15320000 0 25685 2439 23429 216700;216701;216702;216703;216704;216705;216706;216707;216708;216709;216710;216711;216712 173147;173148;173149;173150;173151 173147 5 ITPDMTLQNMK Unmodified 1290.6312 0.63119367 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 62.235 62.447 2 0.01492 70468 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 44.203 35.245 30645000 0 0 0 0 1894800 0 0 3651800 0 0 5025600 5669700 0 3697300 10705000 25686 1601 23430 216713;216714;216715;216716;216717;216718 173152;173153;173154;173155 173154 3 ITPDMTLQNMK Oxidation (M) 1306.6261 0.62610829 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 1 0 By MS/MS 10 0 1 1 45.757 46.509 2 0.0095043 51796 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.04 51.229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25687 1601 23430 216719 173156 173156 2580 1 ITPEEAK Unmodified 786.41233 0.41233399 1905 P62701 RPS4X 40S ribosomal protein S4, X isoform yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 9.9298 10.004 2 0.024481 7487 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 97.068 27.635 301690000 0 0 0 38090000 30782000 39212000 0 46909000 28899000 36234000 0 0 49883000 31681000 0 25688 1905 23431 216720;216721;216722;216723;216724;216725;216726;216727 173157 173157 1 ITPEFSK Unmodified 820.43307 0.43306943 2813 Q5VTB9 RNF220 E3 ubiquitin-protein ligase RNF220 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.259 31.448 2 0.046957 33090 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 65.676 46.721 94166000 0 0 0 5905000 6131600 7289500 5784300 4064300 5305300 9533100 9187800 10172000 9751900 6712700 14328000 25689 2813 23432 216728;216729;216730;216731;216732;216733;216734;216735;216736;216737;216738;216739 173158 173158 1 ITPENLPQILLQLK Unmodified 1618.9658 0.96579333 1473 P43243 MATR3 Matrin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 2 1 1 1 1 1 1 1 1 1 1 1 97.44 96.8 2 1.2624E-12 112891 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 106.62 96.963 202460000 0 24252000 0 3903300 0 3972300 2593300 6854800 4580500 50414000 23257000 8781300 1992800 6000500 65858000 25690 1473 23433 216740;216741;216742;216743;216744;216745;216746;216747;216748;216749;216750;216751;216752;216753 173159;173160;173161;173162;173163;173164;173165;173166;173167;173168;173169;173170;173171 173161 11 ITPENVQIIFDDPLPISYSQPEK Unmodified 2642.3479 0.3479494 472 O75179 ANKRD17 Ankyrin repeat domain-containing protein 17 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 97.661 93.64 3 0.0021297 112491 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 34.19 21.876 26801000 0 26801000 0 0 0 0 0 0 0 0 0 0 0 0 0 25691 472 23434 216754;216755 173172;173173 173173 2 ITPEPAVSNTEEPSTTSTASNYPDVLTRPSLHR Unmodified 3566.7489 0.74888386 1600 P49790 NUP153 Nuclear pore complex protein Nup153 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.772 72.835 4 4.1691E-65 83942 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 95.302 89.758 286650000 0 0 0 5254300 8381700 27494000 9443800 27231000 22966000 33936000 29594000 46676000 21445000 18338000 35893000 25692 1600 23435 216756;216757;216758;216759;216760;216761;216762;216763;216764;216765;216766;216767 173174;173175;173176;173177;173178;173179;173180;173181;173182;173183;173184;173185 173183 12 ITPGARGAFSEEYK Unmodified 1524.7573 0.75725712 888 P09543 CNP 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes yes 0 0 1 By MS/MS 2 0 1 1 49.433 41.607 2 0.0050068 57525 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.014 61.223 19073000 19073000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25693 888 23436 216768 173186 173186 1 ITPHTLNFVK Unmodified 1168.6604 0.66044361 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.979 52.126 3 0.0011917 57741 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 100.48 46.06 315000000 0 0 0 15320000 17275000 24433000 27981000 24369000 22245000 32526000 29239000 29797000 23909000 25688000 42215000 25694 5189 23437 216769;216770;216771;216772;216773;216774;216775;216776;216777;216778;216779;216780 173187;173188;173189;173190;173191;173192;173193;173194;173195;173196;173197;173198 173197 12 ITPLEIEVLEETVQTMDTS Oxidation (M) 2163.0504 0.050446755 4007 Q99436 PSMB7 Proteasome subunit beta type-7 yes yes 0 1 0 By MS/MS By MS/MS 2.8 0.4 1 4 2 3 98.001 94.326 2;3 2.6161E-64 115909 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.57 124.43 360350000 6751800 353600000 0 0 0 0 0 0 0 0 0 0 0 0 0 25695 4007 23438 216781;216782;216783;216784;216785 173199;173200 173199 5488 2 ITPLEIEVLEETVQTMDTS Unmodified 2147.0555 0.055532133 4007 Q99436 PSMB7 Proteasome subunit beta type-7 yes yes 0 0 0 By MS/MS By MS/MS 2.17 0.687 1 3 2 3 3 102.67 98.143 2;3 2.3772E-64 120446 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 156.14 148.69 1054600000 441590000 613000000 0 0 0 0 0 0 0 0 0 0 0 0 0 25696 4007 23438 216786;216787;216788;216789;216790;216791 173201;173202;173203;173204;173205;173206;173207 173206 6 ITPLMAAFRK Unmodified 1146.6583 0.65833512 472 O75179 ANKRD17 Ankyrin repeat domain-containing protein 17 yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 68.134 68.24 3 0.0039848 77247 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.579 45.45 29293000 0 0 0 1721100 0 2944300 1800700 2851900 2268700 3261700 1982100 0 2589900 2742300 7130200 25697 472 23439 216792;216793;216794;216795;216796;216797;216798;216799;216800;216801 173208 173208 1 ITPPAAKPGSPQAK Unmodified 1361.7667 0.76669959 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 23.836 24.038 3 0.015312 25402 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 34.611 20.353 29562000 0 0 0 4332200 0 0 5870000 547820 0 0 0 11780000 7032200 0 0 25698 1364 23440 216802;216803;216804;216805;216806 173209;173210 173210 1 ITPPFNPNVSGPNDLR Unmodified 1736.8846 0.8845829 117 O00141 SGK1 Serine/threonine-protein kinase Sgk1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.515 75.574 2 7.9294E-05 87065 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 102.4 73.442 145520000 0 0 0 7311500 8369800 12818000 8318900 10419000 8540900 14498000 15835000 16723000 12284000 13035000 17371000 25699 117 23441 216807;216808;216809;216810;216811;216812;216813;216814;216815;216816;216817;216818 173211;173212;173213;173214;173215;173216;173217;173218;173219;173220;173221;173222 173213 11 ITPSHAMK Oxidation (M) 899.45349 0.4534873 866 P08579 SNRPB2 U2 small nuclear ribonucleoprotein B'' yes yes 0 1 0 By MS/MS By MS/MS By matching 2 0 3 1 1 1 5.9802 3.0209 2 0.025266 6096 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.058 40.029 980500000 433150000 173370000 373990000 0 0 0 0 0 0 0 0 0 0 0 0 25700 866 23442 216819;216820;216821 173223 173223 1 ITPSHAMK Unmodified 883.45857 0.45857268 866 P08579 SNRPB2 U2 small nuclear ribonucleoprotein B'' yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 6 4 2 2 1 1 1 1 10.138 8.7158 2 0.01674 13800 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 91.626 60.958 796780000 679030000 0 97273000 0 0 0 0 0 0 0 11143000 9333200 0 0 0 25701 866 23442 216822;216823;216824;216825 173224;173225;173226;173227 173224 4 ITPSYVAFTPEGER Unmodified 1565.7726 0.77257283 932 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 71.569 71.639 2;3 4.6145E-20 82177 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 141.88 131.87 2625600000 0 0 0 132570000 149000000 177780000 144880000 148480000 111760000 221170000 366980000 336610000 190250000 189950000 456150000 25702 932 23443 216826;216827;216828;216829;216830;216831;216832;216833;216834;216835;216836;216837;216838;216839;216840;216841;216842;216843;216844;216845;216846;216847;216848;216849 173228;173229;173230;173231;173232;173233;173234;173235;173236;173237;173238;173239;173240;173241;173242;173243;173244;173245;173246;173247 173243 18 ITPSYVAFTPEGERLIGDAAK Unmodified 2234.1583 0.15829814 932 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82.813 82.346 3 2.6794E-15 94442 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 86.625 86.625 748410000 0 8515600 2258300 3876700 14454000 32864000 13473000 48970000 32317000 89519000 73489000 68775000 15002000 52695000 292200000 25703 932 23444 216850;216851;216852;216853;216854;216855;216856;216857;216858;216859;216860;216861;216862;216863 173248;173249;173250;173251;173252;173253;173254;173255;173256;173257;173258;173259;173260;173261;173262;173263 173258 16 ITPTEPPK Unmodified 881.48583 0.48583328 2581 Q15811 ITSN1 Intersectin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 21.483 21.429 2 0.050305 22060 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 46.813 20.59 + 12497000 0 0 0 0 2897100 0 6487700 0 3112000 0 0 0 0 0 0 25704 2581 23445 216864;216865;216866 173264 173264 1 ITPTQVEK Unmodified 914.5073 0.50729701 217 O14802 POLR3A DNA-directed RNA polymerase III subunit RPC1 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 21.026 21.364 2 0.025559 21724 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 58.596 20.436 13698000 0 0 0 0 0 0 0 5103700 0 0 8594500 0 0 0 0 25705 217 23446 216867;216868 173265 173265 1 ITPVIGQGGK Unmodified 968.56548 0.56548059 637 O95263 PDE8B High affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.218 34.401 2 0.036868 37752 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 41.029 15.292 80207000 0 0 0 4558800 4528600 7529400 6681500 6499500 6398900 7624200 7560400 8722600 5178400 5915400 9009800 25706 637 23447 216869;216870;216871;216872;216873;216874;216875;216876;216877;216878;216879;216880 173266 173266 1 ITQDIFQQLLK Unmodified 1345.7606 0.76055158 1779 P56192 MARS Methionine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 90.634 89.517 2 1.2282E-16 112359 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 170.95 130.88 311590000 19461000 186510000 3329900 774360 2543600 7719200 3585900 6056900 4894900 14424000 8954000 8238200 4109800 7804900 33181000 25707 1779 23448 216881;216882;216883;216884;216885;216886;216887;216888;216889;216890;216891;216892;216893;216894;216895;216896 173267;173268;173269;173270;173271;173272;173273;173274;173275;173276;173277;173278;173279;173280;173281 173270 4 ITQEDIEGILQK Unmodified 1385.7402 0.74021007 3572 Q8WWH5 TRUB1 Probable tRNA pseudouridine synthase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 78.269 77.744 2 6.2177E-24 94677 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 197.21 144.95 417620000 0 249730000 0 6554500 9998600 16465000 10133000 13452000 9265400 15437000 13430000 20067000 12575000 15854000 24654000 25708 3572 23449 216897;216898;216899;216900;216901;216902;216903;216904;216905;216906;216907;216908;216909;216910 173282;173283;173284;173285;173286;173287;173288;173289;173290;173291;173292 173284 10 ITQLLSGEQNEQVK Unmodified 1585.8312 0.83115034 49 CON__ENSEMBL:ENSBTAP00000032840 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 50.076 50.27 2 0.0041379 56951 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 57.019 31.634 + 10115000 0 0 0 0 0 0 0 6087400 0 0 0 0 0 4027400 0 25709 49 23450 216911;216912 173293;173294 173293 2 ITQLTPFNGYAGAK Unmodified 1479.7722 0.7721789 233 O14975 SLC27A2 Very long-chain acyl-CoA synthetase yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 70.076 70.093 2 0.0052443 80656 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 47.559 37.872 67773000 0 0 0 4211100 5748800 6245600 5935300 8490800 5143400 9054000 9680600 13263000 0 0 0 25710 233 23451 216913;216914;216915;216916;216917;216918;216919;216920;216921 173295;173296;173297;173298 173298 2 ITQLVSDQANHVLAR Unmodified 1663.9006 0.90056731 3101 Q7Z4S6 KIF21A Kinesin-like protein KIF21A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 57.568 57.686 3 3.1719E-07 65660 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 68.283 63.578 271520000 0 0 0 11924000 11961000 19545000 18659000 15774000 12274000 36793000 28080000 35735000 21531000 20221000 39028000 25711 3101 23452 216922;216923;216924;216925;216926;216927;216928;216929;216930;216931;216932;216933 173299;173300;173301;173302;173303;173304;173305;173306;173307;173308;173309;173310;173311;173312;173313;173314;173315 173299 17 ITQNNAMK Unmodified 918.4593 0.45930096 877 P09012 SNRPA U1 small nuclear ribonucleoprotein A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 8.0109 7.4297 2 0.0024984 8401 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.79 90.32 548770000 48720000 447940000 0 3567500 5201900 6915300 8065900 9404100 7596000 5412800 0 2828000 3119200 0 0 25712 877 23453 216934;216935;216936;216937;216938;216939;216940;216941;216942;216943;216944 173316;173317;173318;173319;173320;173321;173322 173317 7 ITQQGTDPLVLAVQSK Unmodified 1696.9359 0.93594977 3339 Q8N556 AFAP1 Actin filament-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 75.798 75.49 2 2.2499E-38 93404 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.3 125.09 327970000 0 117470000 0 9845800 13734000 18076000 17616000 14642000 18221000 18642000 24195000 22824000 18555000 14829000 19324000 25713 3339 23454 216945;216946;216947;216948;216949;216950;216951;216952;216953;216954;216955;216956;216957 173323;173324;173325;173326;173327;173328;173329;173330;173331;173332;173333;173334;173335 173326 13 ITQQMPK Oxidation (M) 860.44259 0.44258826 2033 Q00341 HDLBP Vigilin yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.19 2.31 1 2 24 1 2 2 2 2 2 2 2 2 2 2 2 2 2 6.2845 6.01 2 0.014091 3145 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 106.76 52.236 270510000 1305500 77818000 0 8196500 8470600 15789000 17263000 9684800 11485000 22249000 20732000 22906000 15751000 19025000 19837000 25714 2033 23455 216958;216959;216960;216961;216962;216963;216964;216965;216966;216967;216968;216969;216970;216971;216972;216973;216974;216975;216976;216977;216978;216979;216980;216981;216982;216983;216984 173336;173337;173338;173339;173340;173341;173342;173343 173340 3289 8 ITQQMPK Unmodified 844.44767 0.44767364 2033 Q00341 HDLBP Vigilin yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 17.738 17.121 2 0.011136 22192 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.68 70.65 492970000 17418000 282140000 0 0 12092000 21553000 16825000 14266000 13267000 22512000 30948000 31598000 0 30342000 0 25715 2033 23455 216985;216986;216987;216988;216989;216990;216991;216992;216993;216994;216995 173344;173345;173346;173347;173348;173349;173350;173351;173352;173353;173354;173355 173350 11 ITQSEFDR Unmodified 994.47197 0.47197413 5139 Q9Y371 SH3GLB1 Endophilin-B1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 2 1 1 1 1 1 1 1 1 26.311 26.497 2 0.0044044 28201 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 110.81 75.314 242770000 0 0 0 9079000 17791000 26053000 18609000 17826000 9494300 25255000 22749000 31994000 27012000 15069000 21836000 25716 5139 23456 216996;216997;216998;216999;217000;217001;217002;217003;217004;217005;217006;217007;217008 173356;173357;173358;173359;173360;173361;173362;173363;173364;173365;173366;173367 173361 11 ITQSEFDRQAEITR Unmodified 1692.8431 0.84311201 5139 Q9Y371 SH3GLB1 Endophilin-B1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 43.947 44.121 2;3 6.2736E-136 48820 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 175.29 124.83 1046000000 0 0 0 65412000 58097000 69502000 74308000 127300000 72932000 87441000 76432000 100360000 130000000 54212000 129970000 25717 5139 23457 217009;217010;217011;217012;217013;217014;217015;217016;217017;217018;217019;217020;217021;217022;217023;217024;217025;217026;217027;217028;217029;217030;217031;217032 173368;173369;173370;173371;173372;173373;173374;173375;173376;173377;173378;173379;173380;173381;173382;173383;173384;173385;173386;173387;173388;173389 173386 22 ITQSNAILR Unmodified 1014.5822 0.58219329 1120;1503 P21266;P28161;P46439 GSTM3;GSTM2;GSTM5 Glutathione S-transferase Mu 3;Glutathione S-transferase Mu 2;Glutathione S-transferase Mu 5 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.866 35.047 2 0.0044372 38640 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 86.833 37.243 291930000 0 0 0 10141000 9686600 15703000 10864000 8446700 7980200 16264000 49925000 42665000 17860000 22048000 80352000 25718 1120;1503 23458 217033;217034;217035;217036;217037;217038;217039;217040;217041;217042;217043;217044 173390;173391;173392;173393;173394;173395;173396;173397;173398;173399;173400;173401;173402 173395 11 ITQVDFPPREIVTYTK Unmodified 1906.02 0.020013746 2281 Q13409 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 yes yes 0 0 1 By MS/MS 2 0 3 3 82.955 74.824 3 0.00066556 97560 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.225 54.611 46433000 46433000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25719 2281 23459 217045;217046;217047 173403;173404;173405 173403 2 ITQVSMASLK Unmodified 1076.59 0.58998078 3909 Q96KP1 EXOC2 Exocyst complex component 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 2 54.113 53.111 2 0.00075579 59932 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 120.33 92.596 280980000 17314000 112760000 0 8799200 9843200 15360000 8999000 10578000 6420800 0 24924000 25639000 16757000 23583000 0 25720 3909 23460 217048;217049;217050;217051;217052;217053;217054;217055;217056;217057;217058;217059;217060;217061 173406;173407;173408;173409;173410;173411;173412;173413;173414;173415;173416;173417;173418 173406 11 ITQVSMASLK Oxidation (M) 1092.5849 0.5848954 3909 Q96KP1 EXOC2 Exocyst complex component 2 yes yes 0 1 0 By MS/MS 2 0 1 1 38.183 31.685 2 0.018493 44138 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.299 35.737 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25721 3909 23460 217062 173419 173419 5408 1 ITRDVGAGK Unmodified 915.51378 0.51377937 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 7.8835 4.9506 2 0.0059779 8444 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 129.83 52.992 139390000 106340000 0 33053000 0 0 0 0 0 0 0 0 0 0 0 0 25722 2203 23461 217063;217064 173420;173421 173420 2 ITRHEAELLSK Unmodified 1295.7197 0.7197494 3915 Q96L91 EP400 E1A-binding protein p400 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 26.466 26.564 3 0.047132 28522 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 31.989 12.931 48515000 0 0 0 0 2653500 8796300 8665200 5340500 5799600 4702000 0 0 7815300 4742400 0 25723 3915 23462 217065;217066;217067;217068;217069;217070;217071;217072 173422 173422 1 ITRIEVGDVNPSETQYISEPK Unmodified 2374.2016 0.20161952 3157 Q86UV5 USP48 Ubiquitin carboxyl-terminal hydrolase 48 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 76.458 71.628 3 8.0093E-07 90364 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.917 63.093 94439000 6535200 45001000 42903000 0 0 0 0 0 0 0 0 0 0 0 0 25724 3157 23463 217073;217074;217075;217076 173423;173424;173425;173426;173427 173423 5 ITRKPVTVSPTTPTSPTEGEAS Unmodified 2255.1645 0.16450573 5282 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.408 42.584 3 1.4295E-05 46488 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.03 48.536 70082000 0 0 0 2619500 3744400 3276700 4296000 5184100 3407100 6729200 7458800 9840100 5574900 7238900 10713000 25725 5282 23464 217077;217078;217079;217080;217081;217082;217083;217084;217085;217086;217087;217088 173428;173429;173430 173428 3 ITRLTYEIEDEK Unmodified 1508.7722 0.77223848 1029 P15924 DSP Desmoplakin yes yes 0 0 1 By MS/MS 2 0 1 1 60.65 52.409 3 0.0092074 71249 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.03 29.351 63767000 63767000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25726 1029 23465 217089 173431 173431 1 ITRYTDINMEDFK Unmodified 1644.7818 0.78175731 3621 Q92547 TOPBP1 DNA topoisomerase 2-binding protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 75.445 67.314 3 0.04149 88857 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 33.842 22.133 9898300 9898300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25727 3621 23466 217090 173432 173432 1 ITRYTEDCFSDSNCVPNK Unmodified 2204.9467 0.94666716 4407 Q9H582 ZNF644 Zinc finger protein 644 yes yes 0 0 1 By MS/MS 2 0 1 1 48.993 45.09 3 0.046225 56793 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 25.824 20.615 4153800 0 0 4153800 0 0 0 0 0 0 0 0 0 0 0 0 25728 4407 23467 217091 173433 173433 1 ITSADGHIESSALLK Unmodified 1540.8097 0.80968662 3340 Q8N573 OXR1 Oxidation resistance protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 3 1 57.564 52.467 2;3 7.9046E-07 67890 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.71 82.021 119760000 0 108480000 11285000 0 0 0 0 0 0 0 0 0 0 0 0 25729 3340 23468 217092;217093;217094;217095 173434;173435;173436;173437 173435 3 ITSAPDMEDILTESEIK Oxidation (M) 1906.9081 0.90813961 4031 Q99598 TSNAX Translin-associated protein X yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 2 1 73.157 73.462 2 1.813E-30 84595 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 116.24 93.12 27969000 0 0 0 0 0 0 0 0 0 0 14018000 0 0 0 13951000 25730 4031 23469 217096;217097;217098;217099;217100;217101 173438;173439;173440;173441;173442 173438 5531 5 ITSAPDMEDILTESEIK Unmodified 1890.9132 0.91322499 4031 Q99598 TSNAX Translin-associated protein X yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 2 1 1 1 1 1 85.601 85.701 2 8.7924E-05 99466 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 88.101 73.225 74722000 0 0 0 0 3755800 0 3093300 7171200 3075000 10177000 0 0 3477100 11905000 32068000 25731 4031 23469 217102;217103;217104;217105;217106;217107;217108;217109;217110;217111 173443;173444;173445;173446;173447;173448;173449;173450;173451;173452;173453 173452 10 ITSAVWGPLGECIIAGHESGELNQYSAK Unmodified 2986.4495 0.44947114 2273 Q13347 EIF3I Eukaryotic translation initiation factor 3 subunit I yes yes 0 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 2 2 92.831 87.313 3 1.7175E-34 110244 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.326 86.404 66429000 41835000 24594000 0 0 0 0 0 0 0 0 0 0 0 0 0 25732 2273 23470 217112;217113;217114;217115 173454;173455;173456;173457 173454 4 ITSDEPLTK Unmodified 1002.5233 0.523341 4831 Q9UBB4 ATXN10 Ataxin-10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24.677 23.988 2 0.0035031 26011 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 103.56 35.582 1239800000 55360000 361930000 4170800 34594000 36914000 91030000 62490000 41665000 35183000 87809000 65015000 96899000 72620000 60172000 133920000 25733 4831 23471 217116;217117;217118;217119;217120;217121;217122;217123;217124;217125;217126;217127;217128;217129;217130 173458;173459;173460;173461;173462;173463;173464;173465;173466;173467;173468;173469;173470 173460 12 ITSEAEDLVANFFPK Unmodified 1679.8407 0.8406524 1844 P61289 PSME3 Proteasome activator complex subunit 3 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 94.267 94.397 2 0.00033045 109606 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 112.15 105.76 22563000 0 0 0 0 0 1096200 0 1265900 0 4894000 3164900 2075400 0 1740600 8326300 25734 1844 23472 217131;217132;217133;217134;217135;217136;217137 173471;173472 173472 0 ITSEAIGQLHR Unmodified 1223.6622 0.66223452 5045 Q9UNY4 TTF2 Transcription termination factor 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 39.032 39.342 3 0.0060523 42646 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 50.452 39.287 80379000 0 0 0 0 0 8093300 0 9462200 8508900 0 14325000 13784000 14835000 11371000 0 25735 5045 23473 217138;217139;217140;217141;217142;217143;217144 173473;173474;173475 173474 3 ITSEALLVTQQLVK Unmodified 1541.9029 0.90285872 3170 Q86VP6 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8 3.4 6 2 23 2 4 2 2 2 2 2 2 2 2 2 2 1 2 2 85.068 83.912 2;3 2.9908E-16 96851 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 142.07 124.2 2381700000 308600000 1408800000 144500000 12444000 20861000 87613000 27060000 30634000 22366000 74678000 44022000 52129000 13672000 37416000 96847000 25736 3170 23474 217145;217146;217147;217148;217149;217150;217151;217152;217153;217154;217155;217156;217157;217158;217159;217160;217161;217162;217163;217164;217165;217166;217167;217168;217169;217170;217171;217172;217173;217174;217175 173476;173477;173478;173479;173480;173481;173482;173483;173484;173485;173486;173487;173488;173489;173490;173491;173492;173493;173494;173495;173496;173497;173498;173499 173485 19 ITSEIPQTER Unmodified 1172.6037 0.60371659 2004 P82979 SARNP SAP domain-containing ribonucleoprotein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.634 33.818 2 0.00088144 36983 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 118.18 70.434 904410000 0 0 0 42494000 50923000 44445000 54904000 45227000 35282000 73730000 120390000 163300000 62222000 67958000 143530000 25737 2004 23475 217176;217177;217178;217179;217180;217181;217182;217183;217184;217185;217186;217187 173500;173501;173502;173503;173504;173505;173506;173507;173508;173509;173510;173511;173512 173505 13 ITSEIPQTERMQK Oxidation (M) 1575.7927 0.79265635 2004 P82979 SARNP SAP domain-containing ribonucleoprotein yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 31.221 26.701 3 0.0020282 35313 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.997 56.199 237680000 20344000 125720000 91617000 0 0 0 0 0 0 0 0 0 0 0 0 25738 2004 23476 217188;217189;217190;217191 173513;173514;173515;173516 173513 3253 3 ITSEIPQTERMQK Unmodified 1559.7977 0.79774172 2004 P82979 SARNP SAP domain-containing ribonucleoprotein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 1 3 2 41.491 36.674 2;3 0.0018514 45612 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 67.952 48.628 532200000 34002000 397840000 100350000 0 0 0 0 0 0 0 0 0 0 0 0 25739 2004 23476 217192;217193;217194;217195;217196;217197 173517;173518;173519;173520 173518 4 ITSELSEANALELLSK Unmodified 1716.9145 0.91454562 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 88.301 87.132 2 6.6106E-66 108579 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 217.21 192.87 270770000 4486000 219100000 5172800 0 2647300 2774300 1682200 2963300 2502000 7649900 3510200 4561000 2629400 4460700 6636800 25740 2804 23477 217198;217199;217200;217201;217202;217203;217204;217205;217206;217207;217208;217209;217210;217211;217212 173521;173522;173523;173524;173525;173526;173527;173528;173529;173530;173531;173532;173533;173534;173535 173523 15 ITSENPDEGFK Unmodified 1235.567 0.56699673 2231;180 Q13085;O00763 ACACA;ACACB Acetyl-CoA carboxylase 1;Biotin carboxylase;Acetyl-CoA carboxylase 2;Biotin carboxylase no no 0 0 0 By MS/MS By matching 10 0 2 1 1 32.186 32.34 2 0.007465 35139 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 62.303 49.249 17350000 0 0 0 0 0 11111000 0 0 0 0 0 0 0 6239300 0 25741 2231;180 23478 217213;217214 173536 173536 1 ITSENPDEGFKPSSGTVQELNFR Unmodified 2551.2191 0.2190605 2231;180 Q13085;O00763 ACACA;ACACB Acetyl-CoA carboxylase 1;Biotin carboxylase;Acetyl-CoA carboxylase 2;Biotin carboxylase no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 72.688 72.723 3 2.5995E-17 83634 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 84.327 72.54 142180000 0 0 0 7583700 7645900 15554000 8264200 9656300 5925300 19545000 12491000 27017000 13228000 15270000 0 25742 2231;180 23479 217215;217216;217217;217218;217219;217220;217221;217222;217223;217224;217225 173537;173538;173539;173540;173541;173542;173543;173544;173545;173546 173542 10 ITSFEEAK Unmodified 923.46001 0.46001246 2151 Q08209 PPP3CA Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27.537 26.984 2 0.016501 27854 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 67.169 34.699 608810000 15557000 501080000 0 5162400 4082800 9381100 4793100 4585200 3357100 7092900 10336000 10771000 5980000 9677100 16957000 25743 2151 23480 217226;217227;217228;217229;217230;217231;217232;217233;217234;217235;217236;217237;217238;217239 173547;173548;173549;173550;173551;173552;173553 173551 7 ITSGPFEPDLYK Unmodified 1365.6816 0.68163256 5067 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 71.599 71.884 2 0.00018423 82615 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 93.556 67.113 271740000 0 0 0 0 0 0 0 0 0 0 43149000 37815000 0 30547000 160230000 25744 5067 23481 217240;217241;217242;217243;217244 173554;173555;173556;173557;173558;173559 173556 5 ITSLDTSTMR Unmodified 1123.5543 0.55432356 2551 Q15596 NCOA2 Nuclear receptor coactivator 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 39.907 40.182 2 0.024578 44711 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 44.863 26.878 44793000 0 0 0 0 2918000 4667000 0 3424100 0 4265000 5829400 7388800 5477900 3245900 7576500 25745 2551 23482 217245;217246;217247;217248;217249;217250;217251;217252;217253 173560;173561 173560 2 ITSLHREVEK Unmodified 1210.667 0.66698555 1387 P37198 NUP62 Nuclear pore glycoprotein p62 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14.405 13.946 3 0.0049046 12589 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 54.471 22.993 346740000 119880000 6239800 0 8181700 9624900 7898500 12574000 17449000 10805000 25310000 24120000 26844000 27105000 20198000 30511000 25746 1387 23483 217254;217255;217256;217257;217258;217259;217260;217261;217262;217263;217264;217265;217266;217267 173562;173563;173564;173565;173566;173567;173568;173569;173570;173571;173572;173573 173567 9 ITSNCTIGLR Unmodified 1133.5863 0.58629239 5060 Q9UPT9 USP22 Ubiquitin carboxyl-terminal hydrolase 22 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 40.367 40.88 2 0.036585 44650 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 41.117 24.341 8555300 0 0 0 0 0 0 0 0 0 0 0 0 0 4351800 4203500 25747 5060 23484 217268;217269 173574 173574 1 ITSPLMEPSSIEK Unmodified 1430.7327 0.73268185 1228 P28066 PSMA5 Proteasome subunit alpha type-5 yes yes 0 0 0 By MS/MS By matching By matching By matching By matching 10 0 5 1 1 1 1 1 68.159 68.186 2 0.0096115 79298 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 45.077 32.871 18744000 0 0 0 2060700 0 0 0 2503700 0 0 5375800 0 4401600 4401800 0 25748 1228 23485 217270;217271;217272;217273;217274 173575 173575 1 ITSPVLMGEENNVVHNQK Unmodified 2008.0048 0.004774387 4778 Q9NZN5 ARHGEF12 Rho guanine nucleotide exchange factor 12 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 61.388 61.76 3 0.038649 69775 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 29.973 22.72 10420000 0 0 0 0 0 0 0 0 2241300 0 0 0 0 0 8178400 25749 4778 23486 217275;217276 173576 173576 0 ITSVAWSPHHDGR Unmodified 1461.7113 0.71130998 3518 Q8TEQ6 GEMIN5 Gem-associated protein 5 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 33.657 34.116 3 0.004649 36685 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 41.227 28.6 20093000 0 0 0 0 0 0 0 0 0 0 0 6827800 8881900 4383000 0 25750 3518 23487 217277;217278;217279 173577;173578 173577 2 ITSYFLNEGSQARPR Unmodified 1737.8798 0.87983187 540 O75792 RNASEH2A Ribonuclease H2 subunit A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 56.975 56.892 3 2.2832E-06 64590 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 83.692 69.946 23816000 0 0 0 0 5643500 0 12147000 0 6025300 0 0 0 0 0 0 25751 540 23488 217280;217281;217282 173579;173580;173581 173579 3 ITTDEMIK Unmodified 949.47903 0.47903335 2647 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 38.36 37.387 2 0.012113 47561 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.28 48.601 320410000 0 248010000 0 0 6436300 10817000 0 9365800 5223700 12526000 0 16598000 0 11438000 0 25752 2647 23489 217283;217284;217285;217286;217287;217288;217289;217290;217291 173582;173583;173584;173585;173586 173583 5 ITTDEMIK Oxidation (M) 965.47395 0.47394797 2647 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 7.71 3.61 2 5 1 1 1 1 1 1 1 22.222 20.977 2 0.016467 26729 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.754 67.055 86265000 5143000 52397000 0 4502100 0 7707800 0 4592900 0 5197400 0 0 6725300 0 0 25753 2647 23489 217292;217293;217294;217295;217296;217297;217298 173587;173588;173589;173590 173587 4310 4 ITTGSSSAGTQSSTSNR Unmodified 1640.7602 0.76017024 232 O14974 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 9.5489 9.682 2 2.4124E-60 6409 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 166.48 154.61 86866000 0 0 0 5847700 5566900 6056900 7488300 4726900 3888300 4835700 12541000 14350000 6741500 4681100 10142000 25754 232 23490 217299;217300;217301;217302;217303;217304;217305;217306;217307;217308;217309;217310 173591;173592;173593;173594;173595;173596;173597;173598;173599;173600;173601;173602 173596 12 ITTGSSSAGTQSSTSNRLWAEDSTEK Unmodified 2700.2475 0.24746009 232 O14974 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes yes 0 0 1 By MS/MS 2 0 1 1 49.895 45.98 3 5.8729E-05 57844 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 47.728 36.082 4239700 0 0 4239700 0 0 0 0 0 0 0 0 0 0 0 0 25755 232 23491 217311 173603 173603 1 ITTNQGVK Unmodified 859.47633 0.47633123 584 O94782 USP1 Ubiquitin carboxyl-terminal hydrolase 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 9.6298 6.8755 2 0.043559 9474 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.176 22.182 49616000 0 47359000 2256700 0 0 0 0 0 0 0 0 0 0 0 0 25756 584 23492 217312;217313 173604 173604 1 ITTQLDQVTAK Unmodified 1216.6663 0.66631685 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.6 3.67 3 7 1 1 1 1 1 1 1 1 1 1 46.52 43.907 2 0.0010553 49059 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 75.387 43.453 282340000 7095100 228220000 1446400 0 0 0 0 0 0 0 0 13783000 0 12382000 19407000 25757 2495 23493 217314;217315;217316;217317;217318;217319;217320;217321;217322;217323 173605;173606;173607;173608;173609;173610;173611;173612;173613;173614;173615 173610 10 ITTSLLPINNGSK Unmodified 1356.7613 0.76127986 2323 Q13596 SNX1 Sorting nexin-1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 76.373 70.865 2 1.5046E-10 91367 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 145.99 106.44 165140000 54115000 111020000 0 0 0 0 0 0 0 0 0 0 0 0 0 25758 2323 23494 217324;217325;217326 173616;173617 173617 2 ITTSMQK Unmodified 807.41604 0.41603916 2329 Q13617 CUL2 Cullin-2 yes yes 0 0 0 By MS/MS 2 0 1 1 14.296 10.982 2 0.015481 14700 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.22 41.277 241710000 0 241710000 0 0 0 0 0 0 0 0 0 0 0 0 0 25759 2329 23495 217327 173618 173618 1 ITTWQDPRK Unmodified 1143.6037 0.60365701 4309 Q9GZV5 WWTR1 WW domain-containing transcription regulator protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 35.616 30.755 3 0.028531 42827 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.461 40.788 42172000 32139000 6551000 3482000 0 0 0 0 0 0 0 0 0 0 0 0 25760 4309 23496 217328;217329;217330 173619 173619 0 ITTYVSFPLELDMTPFMASSK Unmodified 2377.1586 0.15855742 5060 Q9UPT9 USP22 Ubiquitin carboxyl-terminal hydrolase 22 yes yes 0 0 0 By MS/MS 2 0 1 1 67.311 59.016 5 0.049503 79043 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 15.006 10.899 20863000 20863000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25761 5060 23497 217331 173620 173620 0 ITVAECIETQSK Unmodified 1377.681 0.68098063 5005 Q9ULU4 ZMYND8 Protein kinase C-binding protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 54.398 49.051 2 0.024676 63102 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.704 48.389 25291000 0 25291000 0 0 0 0 0 0 0 0 0 0 0 0 0 25762 5005 23498 217332;217333 173621 173621 1 ITVALPR Unmodified 768.48577 0.48577371 1234 P28340 POLD1 DNA polymerase delta catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.491 56.616 2 0.023669 63820 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 84.359 30.649 231520000 0 0 0 15404000 17713000 17802000 19962000 17670000 10430000 16171000 16504000 26914000 19206000 18471000 35275000 25763 1234 23499 217334;217335;217336;217337;217338;217339;217340;217341;217342;217343;217344;217345 173622;173623;173624;173625;173626 173622 5 ITVCATDDSYQK Unmodified 1399.6289 0.62894506 1760 P55199 ELL RNA polymerase II elongation factor ELL yes yes 0 0 0 By MS/MS 2 0 1 1 39.745 34.733 2 0.0025211 45336 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.102 69.87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25764 1760 23500 217346 173627 173627 1 ITVEDDVGGVQGK Unmodified 1315.662 0.66195975 3746 Q96B01 RAD51AP1 RAD51-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.583 43.758 2 2.8114E-32 49675 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 163.38 121.27 733000000 0 0 0 41643000 35599000 35967000 66534000 52870000 47941000 68797000 73901000 73662000 78110000 47215000 110760000 25765 3746 23501 217347;217348;217349;217350;217351;217352;217353;217354;217355;217356;217357;217358 173628;173629;173630;173631;173632;173633;173634;173635;173636;173637;173638 173637 5 ITVFDENADEASTAELSK Unmodified 1938.9058 0.90583143 413 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.446 71.518 2 1.3415E-29 82366 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 113.76 109.05 60690000 0 0 0 3007900 1692900 5246800 3259400 3377800 4253200 5863800 7870600 6860600 3533900 5358000 10365000 25766 413 23502 217359;217360;217361;217362;217363;217364;217365;217366;217367;217368;217369;217370 173639;173640;173641;173642;173643;173644;173645;173646;173647;173648;173649;173650;173651;173652 173640 14 ITVLLDEVAEDMGK Unmodified 1531.7804 0.78036033 4869 Q9UDY8 MALT1 Mucosa-associated lymphoid tissue lymphoma translocation protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 92.949 87.783 2 9.8137E-06 110367 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.48 89.01 52433000 11632000 39656000 1145100 0 0 0 0 0 0 0 0 0 0 0 0 25767 4869 23503 217371;217372;217373 173653;173654;173655 173654 3 ITVLLDEVAEDMGK Oxidation (M) 1547.7753 0.77527495 4869 Q9UDY8 MALT1 Mucosa-associated lymphoid tissue lymphoma translocation protein 1 yes yes 0 1 0 By MS/MS 2 0 1 1 83.795 75.665 2 0.041332 98941 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.829 22.036 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25768 4869 23503 217374 173656 173656 1 ITVNEVELLVMK Oxidation (M) 1402.7742 0.77415274 5036 Q9UNM6 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.25 3.75 6 1 13 2 3 2 2 1 1 1 2 2 2 2 86.816 85.072 2 6.4181E-07 106379 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.78 93.695 289880000 26311000 64676000 26444000 0 15455000 8514300 0 0 3505200 42807000 32634000 53800000 0 0 15734000 25769 5036 23504 217375;217376;217377;217378;217379;217380;217381;217382;217383;217384;217385;217386;217387;217388;217389;217390;217391;217392;217393;217394 173657;173658;173659;173660;173661;173662;173663;173664;173665;173666;173667;173668;173669;173670;173671;173672;173673;173674;173675 173661 6384 15 ITVNEVELLVMK Unmodified 1386.7792 0.77923811 5036 Q9UNM6 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 95.794 90.645 2 0.0061192 113870 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.568 68.887 59168000 23921000 31752000 3495100 0 0 0 0 0 0 0 0 0 0 0 0 25770 5036 23504 217395;217396;217397 173676;173677 173676 1 ITVNGDSSAEAEELANEI Unmodified 1860.8589 0.85888124 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.31 2.4 1 12 1 1 1 1 1 1 1 2 2 1 1 84.871 85.046 2 2.5983E-231 96498 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 236.5 210.85 1920800000 0 16909000 0 0 6048300 3912400 69561000 108610000 113710000 453000000 476920000 657460000 4172300 0 10511000 25771 4226 23505 217398;217399;217400;217401;217402;217403;217404;217405;217406;217407;217408;217409;217410 173678;173679;173680;173681;173682;173683;173684;173685;173686;173687 173685 10 ITVNPESK Unmodified 886.476 0.47599688 4869 Q9UDY8 MALT1 Mucosa-associated lymphoid tissue lymphoma translocation protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 8.53 2.94 1 2 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 22.091 21.4 2 0.02323 22517 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 60.508 8.4899 245780000 66039 129580000 0 5314500 4325500 10097000 6770500 11155000 5358000 12076000 14425000 14919000 11199000 7943600 12552000 25772 4869 23506 217411;217412;217413;217414;217415;217416;217417;217418;217419;217420;217421;217422;217423;217424;217425 173688;173689;173690;173691;173692 173688 4 ITVPGNFQGHSGAQCITCSYK Unmodified 2324.0678 0.067785349 2163 Q08945 SSRP1 FACT complex subunit SSRP1 yes yes 0 0 0 By MS/MS 2 0 1 1 72.783 64.544 3 4.823E-09 85802 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.063 78.805 23224000 23224000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25773 2163 23507 217426 173693 173693 1 ITVPLSVISQPMK Oxidation (M) 1427.8058 0.80578722 2935 Q6P4R8 NFRKB Nuclear factor related to kappa-B-binding protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 80.221 80.262 2 0.002197 92925 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 54.259 43.43 45563000 0 0 0 2492300 0 5494000 6151200 0 5143600 8760200 0 10625000 0 6896900 0 25774 2935 23508 217427;217428;217429;217430;217431;217432;217433 173694;173695;173696;173697;173698;173699;173700 173699 4570 7 ITVPLSVISQPMK Unmodified 1411.8109 0.81087259 2935 Q6P4R8 NFRKB Nuclear factor related to kappa-B-binding protein yes yes 0 0 0 By MS/MS 10 0 1 1 84.413 84.606 2 0.017675 97948 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 38.783 28.259 4718700 0 0 0 0 0 0 0 4718700 0 0 0 0 0 0 0 25775 2935 23508 217434 173701 173701 1 ITVTSEVPFSK Unmodified 1206.6496 0.64960415 1350 P35268 RPL22 60S ribosomal protein L22 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 67.642 66.096 2 1.1411E-06 81177 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 123.63 73.018 3571900000 58948000 2295600000 29749000 82071000 76310000 78478000 89907000 70842000 67886000 101370000 144690000 149390000 100880000 88308000 137450000 25776 1350 23509 217435;217436;217437;217438;217439;217440;217441;217442;217443;217444;217445;217446;217447;217448;217449;217450;217451 173702;173703;173704;173705;173706;173707;173708;173709;173710;173711;173712;173713;173714;173715;173716;173717;173718;173719;173720;173721 173716 20 ITVVGVGAVGMACAISILMK Oxidation (M) 2005.0774 0.077410745 719 P00338 LDHA L-lactate dehydrogenase A chain yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 99.955 95.251 3 6.5267E-08 118711 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.057 63.773 20007000 9207400 9013700 1786200 0 0 0 0 0 0 0 0 0 0 0 0 25777 719 23510 217452;217453;217454;217455;217456 173722;173723;173724;173725;173726 173722 863;864 5 ITVVGVGAVGMACAISILMK 2 Oxidation (M) 2021.0723 0.072325367 719 P00338 LDHA L-lactate dehydrogenase A chain yes yes 0 2 0 By MS/MS By MS/MS 3 0 2 1 1 93.158 89.787 3 0.00020846 92523 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 47.397 44.388 8658700 7674700 984000 0 0 0 0 0 0 0 0 0 0 0 0 0 25778 719 23510 217457;217458 173727 173727 863;864 1 ITVVGVGAVGMACAISILMK Unmodified 1989.0825 0.082496122 719 P00338 LDHA L-lactate dehydrogenase A chain yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 103.27 97.776 3 4.6377E-05 103044 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 58.997 43.055 14581000 8017500 6563900 0 0 0 0 0 0 0 0 0 0 0 0 0 25779 719 23510 217459;217460;217461 173728;173729 173728 2 ITVVGVGQVGMACAISILGK Unmodified 1972.0849 0.084938963 836 P07195 LDHB L-lactate dehydrogenase B chain yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 2 2 2 2 98.755 93.825 3 2.6624E-47 117445 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 91.067 85.858 57269000 33418000 23851000 0 0 0 0 0 0 0 0 0 0 0 0 0 25780 836 23511 217462;217463;217464;217465 173730;173731;173732;173733;173734 173734 5 ITVVGVGQVGMACAISILGK Oxidation (M) 1988.0799 0.079853586 836 P07195 LDHB L-lactate dehydrogenase B chain yes yes 0 1 0 By MS/MS 2 0 1 1 94.209 86.078 3 2.483E-16 111440 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.783 63.995 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25781 836 23511 217466 173735 173735 1022 1 ITVVPSAK Unmodified 813.496 0.49600404 4263 Q9BZE4 GTPBP4 Nucleolar GTP-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.966 34.148 2 0.042547 37763 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 49.57 18.266 150750000 0 0 0 7971400 11141000 9403900 9052700 9511900 7027200 13656000 19514000 15184000 14725000 13613000 19953000 25782 4263 23512 217467;217468;217469;217470;217471;217472;217473;217474;217475;217476;217477;217478 173736 173736 1 ITVVSEK Unmodified 774.44872 0.4487195 2937 Q6P5R6 RPL22L1 60S ribosomal protein L22-like 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.452 21.657 2 0.037306 22806 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 69.998 14.557 904260000 0 0 0 53710000 48487000 69320000 62931000 59619000 38833000 98365000 111980000 118260000 76937000 67185000 98627000 25783 2937 23513 217479;217480;217481;217482;217483;217484;217485;217486;217487;217488;217489;217490 173737 173737 1 ITWLYDNTTGK Unmodified 1310.6507 0.65066678 2150 Q08188 TGM3 Protein-glutamine gamma-glutamyltransferase E;Protein-glutamine gamma-glutamyltransferase E 50 kDa catalytic chain;Protein-glutamine gamma-glutamyltransferase E 27 kDa non-catalytic chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.049 69.128 2 0.00047134 80106 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 104.42 81.683 96073000 0 0 0 23289000 4606500 4980600 4527800 15431000 3338100 7426300 5168000 11272000 5492600 4737300 5804200 25784 2150 23514 217491;217492;217493;217494;217495;217496;217497;217498;217499;217500;217501;217502 173738;173739;173740;173741;173742;173743;173744 173743 7 ITWSIIR Unmodified 887.52289 0.52288749 1398 P38606 ATP6V1A V-type proton ATPase catalytic subunit A yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.38 76.438 2 0.024216 87593 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.793 42.083 68558000 0 0 0 3087400 1692300 10321000 2740400 4079800 2543700 5664000 6518100 6019600 4386400 5783600 15721000 25785 1398 23515 217503;217504;217505;217506;217507;217508;217509;217510;217511;217512;217513;217514 173745;173746;173747 173745 3 ITWSNPPAQGAR Unmodified 1296.6575 0.65748349 1049 P17174 GOT1 Aspartate aminotransferase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 45.683 46.005 2 0.00084886 50521 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.645 71.935 70776000 0 0 0 5703700 0 0 0 0 0 0 8958800 10164000 0 6336300 39614000 25786 1049 23516 217515;217516;217517;217518;217519 173748;173749;173750;173751;173752 173748 5 ITYETQISPRPQPESVSCILQEPK Unmodified 2799.4113 0.41129472 227 O14920 IKBKB Inhibitor of nuclear factor kappa-B kinase subunit beta yes yes 0 0 1 By MS/MS 2 0 1 1 80.626 78.098 3 0.0082718 94732 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 18.699 12.404 3762700 0 0 3762700 0 0 0 0 0 0 0 0 0 0 0 0 25787 227 23517 217520 173753;173754 173753 2 ITYVPAEHLEEFK Unmodified 1574.7981 0.7980593 568 O75970 MPDZ Multiple PDZ domain protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 69.931 69.785 3 0.019873 86971 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 37.613 21.858 48266000 0 0 11003000 0 1362800 3427900 2335600 2995700 2713200 4013000 4401800 3931800 3256600 0 8824800 25788 568 23518 217521;217522;217523;217524;217525;217526;217527;217528;217529;217530;217531 173755;173756 173756 2 IVADFSASVK Unmodified 1035.5601 0.56006086 1612 P49915 GMPS GMP synthase [glutamine-hydrolyzing] yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.27 0.445 8 3 3 7 1 61.027 55.161 2 0.0030867 68548 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.033 58.491 922520000 48804000 862960000 10760000 0 0 0 0 0 0 0 0 0 0 0 0 25789 1612 23519 217532;217533;217534;217535;217536;217537;217538;217539;217540;217541;217542 173757;173758;173759;173760;173761;173762;173763;173764;173765;173766;173767;173768 173757 11 IVADKDYSVTANSK Unmodified 1509.7675 0.76748745 836 P07195 LDHB L-lactate dehydrogenase B chain yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 34.294 29.66 3 0.01571 39017 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 41.967 30.731 19756000 0 19756000 0 0 0 0 0 0 0 0 0 0 0 0 0 25790 836 23520 217543;217544 173769 173769 1 IVAEAIAR Unmodified 841.50215 0.50215205 4517 Q9HCK8 CHD8 Chromodomain-helicase-DNA-binding protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 34.494 34.542 2 0.030197 37899 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 55.676 21.938 142240000 0 0 0 13160000 10716000 17290000 17169000 16402000 13003000 20102000 23620000 0 10781000 0 0 25791 4517 23521 217545;217546;217547;217548;217549;217550;217551;217552;217553 173770;173771 173770 2 IVAELQDK Unmodified 914.5073 0.50729701 166 O00534 VWA5A von Willebrand factor A domain-containing protein 5A yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 35.306 29.713 2 0.0215 38985 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.568 36.007 142660000 3934300 138730000 0 0 0 0 0 0 0 0 0 0 0 0 0 25792 166 23522 217554;217555 173772 173772 1 IVAENHLK Unmodified 922.52362 0.52361577 1026 P15822 HIVEP1 Zinc finger protein 40 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 17.956 14.488 2 0.024584 21381 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.119 38.644 50347000 23605000 11186000 15556000 0 0 0 0 0 0 0 0 0 0 0 0 25793 1026 23523 217556;217557;217558 173773;173774 173773 2 IVAENLEK Unmodified 914.5073 0.50729701 2408 Q14457 BECN1 Beclin-1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 32.535 28.028 2 0.028065 36797 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.923 13.165 61720000 0 61720000 0 0 0 0 0 0 0 0 0 0 0 0 0 25794 2408 23524 217559;217560 173775;173776 173776 2 IVAERPGTNSTGPAPMAPPR Oxidation (M) 2034.0317 0.031657839 2262 Q13263 TRIM28 Transcription intermediary factor 1-beta yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 38.202 38.111 3 0.00010038 42340 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 49.188 39.904 125710000 0 0 0 17690000 17867000 25628000 20002000 20956000 0 23568000 0 0 0 0 0 25795 2262 23525 217561;217562;217563;217564;217565;217566 173777;173778;173779 173779 3685 3 IVAERPGTNSTGPAPMAPPR Unmodified 2018.0367 0.036743217 2262 Q13263 TRIM28 Transcription intermediary factor 1-beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.987 47.152 3 2.2828E-61 52989 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 132.79 121.47 684870000 0 0 0 38625000 32692000 63972000 32752000 32435000 20711000 64043000 67724000 79313000 56919000 52252000 143430000 25796 2262 23525 217567;217568;217569;217570;217571;217572;217573;217574;217575;217576;217577;217578 173780;173781;173782;173783;173784;173785;173786;173787;173788;173789;173790;173791;173792;173793;173794 173781 15 IVAERPGTNSTGPAPMAPPRAPGPLSK Oxidation (M) 2684.4068 0.40681846 2262 Q13263 TRIM28 Transcription intermediary factor 1-beta yes yes 0 1 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 2 1 1 2 1 2 1 1 2 51.582 51.85 3;4 2.9809E-20 58335 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 65.155 58.491 695600000 0 0 0 0 60439000 9557600 107020000 98945000 10884000 115660000 13520000 137050000 11227000 8252900 123040000 25797 2262 23526 217579;217580;217581;217582;217583;217584;217585;217586;217587;217588;217589;217590;217591;217592;217593 173795;173796;173797;173798;173799;173800;173801;173802;173803;173804;173805;173806;173807 173806 3685 12 IVAERPGTNSTGPAPMAPPRAPGPLSK Unmodified 2668.4119 0.41190384 2262 Q13263 TRIM28 Transcription intermediary factor 1-beta yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.68 1.57 1 24 1 2 2 2 2 2 2 2 2 2 2 2 2 60.275 60.046 3;4 9.9376E-84 68275 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 118.57 111.77 1229300000 12342000 0 0 47934000 36007000 88243000 59678000 92583000 47297000 109730000 112440000 127230000 84154000 111960000 299730000 25798 2262 23526 217594;217595;217596;217597;217598;217599;217600;217601;217602;217603;217604;217605;217606;217607;217608;217609;217610;217611;217612;217613;217614;217615;217616;217617;217618 173808;173809;173810;173811;173812;173813;173814;173815;173816;173817;173818;173819;173820;173821;173822;173823;173824;173825;173826;173827;173828 173818 21 IVAETMNNYLFGER Oxidation (M) 1671.7927 0.79265635 4250 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 69.278 69.372 2 0.00025008 79501 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.781 56.756 35689000 0 0 0 0 3581300 4114800 3353200 2646200 2541400 4358600 7262900 7830800 0 0 0 25799 4250 23527 217619;217620;217621;217622;217623;217624;217625;217626 173829;173830;173831;173832;173833;173834;173835;173836 173835 5716 8 IVAETMNNYLFGER Unmodified 1655.7977 0.79774172 4250 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 80.256 80.42 2 2.7915E-06 92562 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.767 55.463 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25800 4250 23527 217627;217628 173837;173838 173838 2 IVAFENAFER Unmodified 1194.6033 0.60332266 430 O60763 USO1 General vesicular transport factor p115 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.034 74.094 2 0.0047747 85210 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 71.614 46.691 377280000 0 0 0 16637000 16283000 39374000 21798000 26026000 16999000 37171000 34771000 49327000 26365000 25457000 67077000 25801 430 23528 217629;217630;217631;217632;217633;217634;217635;217636;217637;217638;217639;217640 173839;173840;173841;173842;173843;173844;173845;173846;173847;173848 173841 10 IVAIGTSDLDK Unmodified 1130.6183 0.61830402 1541 P48507 GCLM Glutamate--cysteine ligase regulatory subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 3 1 1 1 1 1 1 1 1 1 1 1 1 1 55.496 54.635 2 1.8252E-06 67823 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 121.73 87.48 1516400000 0 1081800000 22105000 24374000 18946000 44272000 40719000 23519000 12261000 42090000 51109000 39269000 21204000 35125000 59648000 25802 1541 23529 217641;217642;217643;217644;217645;217646;217647;217648;217649;217650;217651;217652;217653;217654;217655;217656 173849;173850;173851;173852;173853;173854;173855;173856;173857;173858;173859;173860;173861;173862;173863;173864;173865;173866 173860 16 IVAISCAADILK Unmodified 1272.7112 0.71115855 2828 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 82.588 81.374 2 3.3777E-05 101717 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.38 87.688 243300000 17291000 178750000 3308600 0 2411300 4525800 3094900 3254500 2717800 10859000 5753200 7841600 3489200 0 0 25803 2828 23530 217657;217658;217659;217660;217661;217662;217663;217664;217665;217666;217667;217668;217669 173867;173868;173869;173870;173871;173872;173873;173874;173875;173876;173877;173878;173879;173880 173870 14 IVALDLR Unmodified 798.49634 0.49633839 5221 Q9Y570 PPME1 Protein phosphatase methylesterase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.053 61.157 2 0.026498 68822 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 78.616 31.57 142500000 0 0 0 7918200 8689200 7505000 10412000 10706000 4602600 13005000 14156000 17547000 10751000 11602000 25610000 25804 5221 23531 217670;217671;217672;217673;217674;217675;217676;217677;217678;217679;217680;217681 173881;173882 173882 2 IVALSSSLSNAK Unmodified 1188.6714 0.67140222 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 52.944 53.085 2 6.5812E-08 59944 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 118.21 93.69 985870000 0 0 0 43327000 59443000 96079000 64199000 64309000 36229000 0 90497000 137460000 119130000 112350000 162850000 25805 528 23532 217682;217683;217684;217685;217686;217687;217688;217689;217690;217691;217692 173883;173884;173885;173886;173887;173888;173889;173890;173891;173892;173893 173883 11 IVANSANVNGR Unmodified 1113.5891 0.58906958 16 A3KMH1 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 17.328 17.522 2 0.019261 17018 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 43.185 26.727 12535000 0 0 0 0 1247500 0 1801900 1486200 0 1837500 2558000 3603600 0 0 0 25806 16 23533 217693;217694;217695;217696;217697;217698 173894;173895 173895 2 IVAPISDSPKPPPQR Unmodified 1600.8937 0.89369102 641 O95336 PGLS 6-phosphogluconolactonase yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 46.411 46.763 3 0.00012081 51778 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.651 71.212 84133000 0 0 0 0 0 16206000 3771300 0 0 14931000 0 18123000 0 0 31102000 25807 641 23534 217699;217700;217701;217702;217703 173896;173897;173898 173897 0 IVAPPGGR Unmodified 765.44972 0.44972255 2613 Q16555;Q14195;Q14194 DPYSL2;DPYSL3;CRMP1 Dihydropyrimidinase-related protein 2;Dihydropyrimidinase-related protein 3;Dihydropyrimidinase-related protein 1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 21.333 21.564 2 0.036964 21820 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 51.572 18.079 158000000 0 0 0 7784300 3853000 0 6107000 11626000 4071200 0 25582000 28823000 15308000 15934000 38916000 25808 2613 23535 217704;217705;217706;217707;217708;217709;217710;217711;217712;217713 173899 173899 1 IVASMWDSLGEEQK Oxidation (M) 1607.7501 0.75012283 592 O94842;O15405;Q96NM4 TOX4;TOX3;TOX2 TOX high mobility group box family member 4;TOX high mobility group box family member 3;TOX high mobility group box family member 2 yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 1 2 2 2 2 2 2 2 2 2 2 2 64.33 64.453 2 8.481E-21 74286 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 143.96 106.62 214800000 0 0 0 4858700 13120000 13823000 18500000 15905000 18793000 21278000 21439000 26529000 18724000 18600000 23231000 25809 592 23536 217714;217715;217716;217717;217718;217719;217720;217721;217722;217723;217724;217725;217726;217727;217728;217729;217730;217731;217732;217733;217734;217735;217736 173900;173901;173902;173903;173904;173905;173906;173907;173908;173909;173910;173911;173912;173913;173914;173915;173916;173917;173918;173919;173920;173921;173922;173923;173924 173911 746 25 IVASMWDSLGEEQK Unmodified 1591.7552 0.75520821 592 O94842;O15405;Q96NM4 TOX4;TOX3;TOX2 TOX high mobility group box family member 4;TOX high mobility group box family member 3;TOX high mobility group box family member 2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77.519 76.994 2 1.7321E-101 95139 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 220.94 199.48 265640000 0 77529000 1455500 5217000 9169900 15713000 7702600 19334000 20592000 23984000 24815000 24991000 12625000 22507000 0 25810 592 23536 217737;217738;217739;217740;217741;217742;217743;217744;217745;217746;217747;217748;217749;217750 173925;173926;173927;173928;173929;173930;173931;173932;173933;173934;173935;173936;173937;173938;173939;173940;173941;173942;173943;173944;173945;173946;173947 173929 23 IVASTLSNPELFEEWTGNVK Unmodified 2233.1267 0.12666366 1049 P17174 GOT1 Aspartate aminotransferase, cytoplasmic yes yes 0 0 0 By MS/MS 10 0 1 1 91.191 91.329 3 0.030294 105799 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 23.172 15.18 2103300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2103300 25811 1049 23537 217751 173948 173948 1 IVATKPLYVALAQR Unmodified 1541.9293 0.92934824 958 P11940;Q9H361 PABPC1;PABPC3 Polyadenylate-binding protein 1;Polyadenylate-binding protein 3 yes no 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 72.306 72.539 3 0.017014 83539 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 33.685 32.882 8158700 0 0 0 0 0 0 3833400 0 0 0 0 4325300 0 0 0 25812 958 23538 217752;217753 173949;173950 173949 2 IVATLPYIK Unmodified 1016.627 0.62701821 1291 P30876 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.383 75.442 2 0.0043999 86898 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 86.953 49.933 125630000 0 0 0 6080900 5852400 9786600 7522600 7879200 7644100 11338000 11013000 13784000 7710100 11411000 25606000 25813 1291 23539 217754;217755;217756;217757;217758;217759;217760;217761;217762;217763;217764;217765 173951;173952;173953;173954;173955;173956;173957;173958;173959;173960;173961;173962 173960 12 IVAVTGAEAQK Unmodified 1085.6081 0.60807369 1578 P49588 AARS Alanine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.543 28.738 2 6.2436E-05 30463 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 113.74 79.783 516610000 0 0 0 13421000 13143000 36665000 26397000 16480000 13607000 38770000 71003000 68479000 27175000 52626000 138840000 25814 1578 23540 217766;217767;217768;217769;217770;217771;217772;217773;217774;217775;217776;217777 173963;173964;173965;173966;173967;173968;173969;173970;173971;173972;173973;173974 173968 11 IVCDLIENK Unmodified 1102.5692 0.56924534 2215 Q12965 MYO1E Unconventional myosin-Ie yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.12 3.72 2 1 5 2 1 1 1 1 1 1 51.89 49.975 2 0.00074134 64217 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.69 88.335 689420000 0 617170000 10049000 12437000 11530000 0 12447000 14842000 0 0 0 0 0 10939000 0 25815 2215 23541 217778;217779;217780;217781;217782;217783;217784;217785 173975;173976;173977;173978;173979;173980;173981 173976 5 IVCSQPYSK Unmodified 1080.5274 0.52738052 1082 P18887 XRCC1 DNA repair protein XRCC1 yes yes 0 0 0 By MS/MS 2 0 1 1 22.827 18.801 2 0.0031178 24863 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.25 66.892 24145000 0 24145000 0 0 0 0 0 0 0 0 0 0 0 0 0 25816 1082 23542 217786 173982 173982 1 IVDAVIEQVK Unmodified 1112.6441 0.64412484 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.797 58.911 2 0.0023993 66052 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 83.998 43.647 131230000 0 0 0 8258500 7984700 10771000 10170000 8970200 9021600 12815000 12607000 15404000 9875400 11579000 13771000 25817 2193 23543 217787;217788;217789;217790;217791;217792;217793;217794;217795;217796;217797;217798 173983;173984;173985;173986;173987;173988;173989;173990;173991;173992;173993;173994 173990 12 IVDDLKDEAEQYRK Unmodified 1720.8632 0.86317875 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 2 1 2 1 2 1 1 2 2 2 2 2 46.173 46.383 3;4 7.4721E-22 51022 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 133.16 110.3 795610000 0 0 0 23787000 13800000 31300000 22125000 98683000 12980000 38807000 79673000 138000000 100540000 99348000 136570000 25818 516 23544 217799;217800;217801;217802;217803;217804;217805;217806;217807;217808;217809;217810;217811;217812;217813;217814;217815;217816;217817;217818 173995;173996;173997;173998;173999;174000;174001;174002;174003;174004;174005;174006;174007;174008;174009;174010;174011;174012 173998 17 IVDGAVFAVLK Unmodified 1130.6699 0.66994566 3709 Q93074 MED12 Mediator of RNA polymerase II transcription subunit 12 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 83.714 83.876 2 0.0066943 96721 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.908 26.991 13696000 0 0 0 0 0 0 0 2735700 3213200 0 0 0 2328000 0 5418700 25819 3709 23545 217819;217820;217821;217822 174013 174013 1 IVDIIDTTGSGDVNTATEVEPK Unmodified 2273.1275 0.12745152 1243 P29144 TPP2 Tripeptidyl-peptidase 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.84 3.72 4 4 11 4 4 1 1 1 1 1 1 1 1 1 1 1 77.895 75.82 2;3 9.2385E-191 88274 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 207.5 194.36 688040000 48112000 569360000 0 1793000 2752900 4469400 2414800 3224300 2429500 6238200 11956000 8826000 0 8179500 18287000 25820 1243 23546 217823;217824;217825;217826;217827;217828;217829;217830;217831;217832;217833;217834;217835;217836;217837;217838;217839;217840;217841 174014;174015;174016;174017;174018;174019;174020;174021;174022;174023;174024;174025;174026 174018 11 IVDILLK Unmodified 812.53714 0.53714057 3324 Q8N3P4 VPS8 Vacuolar protein sorting-associated protein 8 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 78.832 78.967 2 0.029815 91177 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 75.311 2.2718 94451000 0 0 0 0 0 0 0 0 0 22892000 0 0 16881000 17133000 37544000 25821 3324 23547 217842;217843;217844;217845 174027;174028;174029;174030 174027 4 IVDLGEEPEKPAPSLVGTAP Unmodified 2018.0572 0.057187113 646 O95361;Q309B1 TRIM16;TRIM16L Tripartite motif-containing protein 16;Tripartite motif-containing protein 16-like protein yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.221 78.281 2 1.0292E-05 90471 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 82.543 77.913 115610000 0 0 0 4354900 6942100 5386100 8775600 6518900 4469200 14012000 12419000 15056000 10359000 10342000 16977000 25822 646 23548 217846;217847;217848;217849;217850;217851;217852;217853;217854;217855;217856;217857 174031;174032;174033;174034;174035 174031 5 IVDNGYGYVSNGSVYFDTAK Unmodified 2168.0062 0.006214175 1579 P49589 CARS Cysteine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By matching 2 0 3 2 1 79.601 75.584 2;3 1.2986E-85 93782 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 204.23 177.52 258530000 0 255760000 2766800 0 0 0 0 0 0 0 0 0 0 0 0 25823 1579 23549 217858;217859;217860 174036;174037;174038 174036 3 IVDNLGASGNSLYQR Unmodified 1605.8111 0.8110836 2947 Q6PGP7 TTC37 Tetratricopeptide repeat protein 37 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 57.601 58.202 2 1.6047E-14 65483 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 102.4 92.447 7047500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7047500 25824 2947 23550 217861;217862;217863;217864 174039;174040;174041;174042 174040 4 IVDNLQSR Unmodified 943.50869 0.50869399 4483 Q9HAB8 PPCS Phosphopantothenate--cysteine ligase yes yes 0 0 0 By MS/MS 2 0 1 1 27.536 23.231 2 0.043728 30711 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.105 21.355 17088000 0 17088000 0 0 0 0 0 0 0 0 0 0 0 0 0 25825 4483 23551 217865 174043 174043 1 IVDPEIALK Unmodified 996.58555 0.58554733 1329 P33240 CSTF2 Cleavage stimulation factor subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.535 64.624 2 0.0051444 73762 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 82.241 63.458 242260000 0 0 0 10207000 12259000 10882000 15407000 15745000 12111000 18406000 29971000 29615000 19305000 24276000 44074000 25826 1329 23552 217866;217867;217868;217869;217870;217871;217872;217873;217874;217875;217876;217877 174044;174045;174046;174047;174048;174049;174050;174051;174052;174053 174049 10 IVDPNGLAR Unmodified 953.52943 0.52942943 1432 P41212 ETV6 Transcription factor ETV6 yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching 10 0 8 1 1 1 1 1 1 1 1 37.947 38.174 2 0.0097334 42327 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 65.88 37.706 42165000 0 0 0 3403200 0 3044400 0 4574900 3226700 6986000 0 9185900 5182400 0 6561000 25827 1432 23553 217878;217879;217880;217881;217882;217883;217884;217885 174054;174055 174055 2 IVDQIRPDR Unmodified 1110.6146 0.61455605 1062;3670 P17844;Q92841 DDX5;DDX17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.654 26.855 2 0.040274 28687 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 124.23 70.073 388140000 0 0 0 10376000 19404000 32892000 27540000 25756000 22435000 42751000 40505000 36594000 40433000 38545000 50905000 25828 1062;3670 23554 217886;217887;217888;217889;217890;217891;217892;217893;217894;217895;217896;217897 174056 174056 0 IVDRIDNDGDGFVTTEELK Unmodified 2135.0382 0.038242585 2515 Q15293 RCN1 Reticulocalbin-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.88 3.83 8 2 15 4 4 2 1 1 1 1 1 1 1 1 2 1 2 2 71.47 69.939 2;3 1.2466E-83 85719 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 176.75 141.1 2061200000 710410000 770720000 229340000 6789100 11206000 16975000 8772400 16357000 10737000 17314000 35048000 61229000 14161000 30678000 121460000 25829 2515 23555 217898;217899;217900;217901;217902;217903;217904;217905;217906;217907;217908;217909;217910;217911;217912;217913;217914;217915;217916;217917;217918;217919;217920;217921;217922 174057;174058;174059;174060;174061;174062;174063;174064;174065;174066;174067;174068;174069;174070;174071;174072;174073;174074;174075;174076;174077;174078;174079;174080;174081;174082;174083;174084;174085;174086;174087;174088;174089;174090;174091;174092;174093;174094 174085 38 IVDVIGEK Unmodified 871.50148 0.50148335 990 P13861 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43.22 42.7 2 0.017811 52724 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 89.752 26.446 897200000 0 521280000 9425600 29018000 18847000 20525000 24774000 25251000 18754000 31972000 44968000 40303000 30622000 29514000 51946000 25830 990 23556 217923;217924;217925;217926;217927;217928;217929;217930;217931;217932;217933;217934;217935;217936 174095;174096;174097 174095 3 IVDVMDSSQQK Unmodified 1248.602 0.60200203 535 O75717 WDHD1 WD repeat and HMG-box DNA-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38.53 37.836 2 0.00033962 40801 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 99.815 38.842 267320000 14286000 121800000 0 6105900 5382300 11021000 8241400 9849100 6606500 11163000 16579000 15897000 14843000 9838200 15704000 25831 535 23557 217937;217938;217939;217940;217941;217942;217943;217944;217945;217946;217947;217948;217949;217950 174098;174099;174100;174101;174102;174103;174104;174105;174106;174107;174108;174109 174103 12 IVDVMDSSQQK Oxidation (M) 1264.5969 0.59691665 535 O75717 WDHD1 WD repeat and HMG-box DNA-binding protein 1 yes yes 0 1 0 By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 21.318 21.504 2 0.0048001 22299 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 54.416 38.535 48710000 0 0 0 4228300 3837900 0 7906300 3537300 0 7014100 0 8650700 7552300 0 5983100 25832 535 23557 217951;217952;217953;217954;217955;217956;217957;217958;217959;217960 174110;174111;174112;174113;174114 174114 700 5 IVDYLLEK Unmodified 991.559 0.55899823 4530 Q9HD67 MYO10 Unconventional myosin-X yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.348 65.435 2 0.037548 75073 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.346 38.814 45245000 0 0 0 2526400 2531800 3773100 3098800 2316900 2745900 3911500 3473500 6242500 4149300 3298500 7176400 25833 4530 23558 217961;217962;217963;217964;217965;217966;217967;217968;217969;217970;217971;217972 174115;174116;174117;174118 174115 4 IVEAAENEYQTAISENYQTMSDTTFK Oxidation (M) 2998.339 0.33897722 1524 P47755 CAPZA2 F-actin-capping protein subunit alpha-2 yes yes 0 1 0 By MS/MS 2 0 1 1 78.703 73.967 3 1.097E-06 92115 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.442 59.078 125450000 0 125450000 0 0 0 0 0 0 0 0 0 0 0 0 0 25834 1524 23559 217973 174119 174119 2422 1 IVEAAENEYQTAISENYQTMSDTTFK Unmodified 2982.3441 0.34406259 1524 P47755 CAPZA2 F-actin-capping protein subunit alpha-2 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 84.453 80.964 3 2.5303E-169 100225 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 206.33 203.67 514380000 0 508490000 5883100 0 0 0 0 0 0 0 0 0 0 0 0 25835 1524 23559 217974;217975;217976 174120;174121;174122;174123 174120 4 IVEAILQEK Unmodified 1041.607 0.60701105 3328 Q8N3Y7 SDR16C5 Epidermal retinol dehydrogenase 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 54.525 54.602 2 0.0030604 61651 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 91.853 44.772 82858000 0 0 0 15429000 8885000 4997700 8971700 11216000 4029000 9340600 6447300 6362800 7178000 0 0 25836 3328 23560 217977;217978;217979;217980;217981;217982;217983;217984;217985;217986 174124;174125;174126;174127;174128;174129;174130;174131;174132 174130 8 IVEANPLLEAFGNAK Unmodified 1584.8512 0.8511575 5014 Q9UM54 MYO6 Unconventional myosin-VI yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 88.544 88.671 2 0.0013598 102658 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.344 36.489 12941000 0 0 0 0 0 2635200 0 0 0 0 2223900 3126700 0 2290500 2664700 25837 5014 23561 217987;217988;217989;217990;217991 174133;174134 174134 2 IVEDAPPIDLQAEAQHASGEVEEPPR Unmodified 2796.3566 0.35661661 1291 P30876 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 77.044 77.153 3 2.0542E-19 89171 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.133 70.68 109010000 0 0 0 0 4518500 8417000 3783700 6246500 6286500 15898000 9706600 13405000 7771800 10444000 22536000 25838 1291 23562 217992;217993;217994;217995;217996;217997;217998;217999;218000;218001;218002 174135;174136;174137;174138;174139;174140;174141;174142;174143;174144 174143 10 IVEDEPNK Unmodified 942.46583 0.46582612 1754 P55060 CSE1L Exportin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 11.649 11.796 2 0.006015 11007 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 104.45 92.679 537850000 0 0 0 22078000 24579000 79367000 37619000 30345000 20865000 69019000 40053000 50737000 38284000 57623000 67283000 25839 1754 23563 218003;218004;218005;218006;218007;218008;218009;218010;218011;218012;218013;218014 174145;174146;174147;174148;174149;174150;174151;174152;174153;174154 174146 9 IVEEALEAVK Unmodified 1099.6125 0.61249036 1200 P26232 CTNNA2 Catenin alpha-2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 72.432 67.397 2 0.017706 85663 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.27 20.552 227830000 0 227830000 0 0 0 0 0 0 0 0 0 0 0 0 0 25840 1200 23564 218015;218016 174155 174155 1 IVEEAVLK Unmodified 899.53278 0.53278348 1455 P42356 PI4KA Phosphatidylinositol 4-kinase alpha yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 47.117 41.907 2 0.043559 54486 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.176 29.073 32907000 0 32907000 0 0 0 0 0 0 0 0 0 0 0 0 0 25841 1455 23565 218017;218018 174156 174156 1 IVEEETK Unmodified 846.43346 0.43346336 1756 P55081 MFAP1 Microfibrillar-associated protein 1 yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 9.3735 5.8588 2 0.022033 8370 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.24 55.555 35126000 5328000 29798000 0 0 0 0 0 0 0 0 0 0 0 0 0 25842 1756 23566 218019;218020 174157;174158 174158 2 IVEEETKK Unmodified 974.52843 0.52842638 1756 P55081 MFAP1 Microfibrillar-associated protein 1 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 7.0275 3.7268 2 0.034397 5852 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.89 22.263 57605000 0 57605000 0 0 0 0 0 0 0 0 0 0 0 0 0 25843 1756 23567 218021;218022 174159;174160 174159 2 IVEEPQSNR Unmodified 1070.5356 0.53563702 684 O95747 OXSR1 Serine/threonine-protein kinase OSR1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.525 14.688 2 0.0029087 13205 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 124.98 104.99 454190000 0 0 0 22231000 22354000 41551000 28675000 24552000 18455000 57130000 51232000 47208000 38550000 38091000 64164000 25844 684 23568 218023;218024;218025;218026;218027;218028;218029;218030;218031;218032;218033;218034 174161;174162;174163;174164;174165;174166;174167;174168;174169;174170;174171 174167 11 IVEEPQSNRSVTFK Unmodified 1632.8471 0.84713476 684 O95747 OXSR1 Serine/threonine-protein kinase OSR1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 2 2 2 45.165 39.744 2;3 1.4367E-10 54992 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 91.441 77.855 276180000 50591000 91344000 134250000 0 0 0 0 0 0 0 0 0 0 0 0 25845 684 23569 218035;218036;218037;218038;218039;218040 174172;174173;174174;174175;174176;174177;174178;174179 174176 7 IVEGILK Unmodified 770.49019 0.49019038 2523 Q15370 TCEB2 Transcription elongation factor B polypeptide 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 64.15 64.169 2 0.043924 73399 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 67.035 22.424 78217000 0 0 0 2464200 5414300 7554100 8915000 13824000 12490000 7062700 8740600 11753000 0 0 0 25846 2523 23570 218041;218042;218043;218044;218045;218046;218047;218048;218049 174180;174181 174181 2 IVEGISQPIWLVSDTR Unmodified 1811.9781 0.97814893 2500 Q15126 PMVK Phosphomevalonate kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 88.237 88.366 2 1.0282E-20 102298 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 114.82 99.277 12192000 0 0 0 0 0 2632700 0 0 0 3029100 2164300 0 0 0 4366100 25847 2500 23571 218050;218051;218052;218053;218054;218055 174182;174183;174184;174185;174186;174187 174184 6 IVEGISQPIWLVSDTRR Unmodified 1968.0793 0.079259959 2500 Q15126 PMVK Phosphomevalonate kinase yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 83.308 83.336 3 3.4071E-06 96152 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.673 59.279 2945400 0 0 0 0 0 2945400 0 0 0 0 0 0 0 0 0 25848 2500 23572 218056;218057 174188;174189 174189 2 IVEHAEK Unmodified 824.43922 0.43921744 3076 Q7Z2Z2 EFTUD1 Elongation factor Tu GTP-binding domain-containing protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 5.7508 2.45 2 0.016505 4474 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.57 58.568 187860000 0 187860000 0 0 0 0 0 0 0 0 0 0 0 0 0 25849 3076 23573 218058;218059 174190;174191 174190 2 IVEIDAHIGCAMSGLIADAK Unmodified 2083.0442 0.044196361 1228 P28066 PSMA5 Proteasome subunit alpha type-5 yes yes 0 0 0 By MS/MS By MS/MS 2.14 0.639 1 4 2 4 3 94.978 91.052 2;3 2.2008E-05 109469 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.823 52.901 283580000 234030000 49557000 0 0 0 0 0 0 0 0 0 0 0 0 0 25850 1228 23574 218060;218061;218062;218063;218064;218065;218066 174192;174193;174194;174195;174196;174197;174198 174192 5 IVEIDAHIGCAMSGLIADAK Oxidation (M) 2099.0391 0.039110983 1228 P28066 PSMA5 Proteasome subunit alpha type-5 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 80.957 75.011 3 1.2792E-07 96490 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.568 49.469 24497000 24497000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25851 1228 23574 218067;218068 174199;174200 174200 1817 2 IVEIPFNSTNK Unmodified 1260.6714 0.67140222 792 P05023 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 68.393 67.56 2 0.00020441 77893 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 120.68 81.534 307240000 0 144390000 1385900 10156000 10927000 11366000 9918800 11268000 7683700 13762000 16596000 22350000 14901000 15360000 17178000 25852 792 23575 218069;218070;218071;218072;218073;218074;218075;218076;218077;218078;218079;218080;218081;218082;218083 174201;174202;174203;174204;174205;174206;174207;174208;174209 174209 7 IVELEVENR Unmodified 1099.5873 0.58733824 5191;610 O94964;Q9Y4B5 SOGA1;MTCL1 Protein SOGA1;N-terminal form;C-terminal 80 kDa form;Microtubule cross-linking factor 1 no no 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 49.456 49.647 2 0.013999 55148 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 91.069 49.766 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25853 610;5191 23576 218084;218085 174210;174211 174211 2 IVELLNETEK Unmodified 1186.6445 0.64451877 4077 Q99996 AKAP9 A-kinase anchor protein 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 59.135 59.206 2 0.0033866 67313 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 76.679 19.501 75572000 0 0 0 0 9458100 11622000 10985000 10981000 7575400 11511000 13439000 0 0 0 0 25854 4077 23577 218086;218087;218088;218089;218090;218091;218092 174212;174213;174214;174215;174216;174217;174218 174214 7 IVELPAPADFLSLSSETK Unmodified 1916.0143 0.014259666 2927 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 95.372 95.525 2 0.0045831 111055 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 36.847 30.411 8215100 0 0 0 0 0 0 0 0 0 2122900 1735600 0 0 0 4356700 25855 2927 23578 218093;218094;218095 174219;174220;174221 174219 3 IVELPAPADFLSLSSETKPK Unmodified 2141.162 0.16198654 2927 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 91.214 91.365 3 8.9061E-06 105881 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.288 45.356 8660600 0 0 0 0 0 0 0 1156900 0 2150400 0 0 0 0 5353300 25856 2927 23579 218096;218097;218098 174222;174223;174224;174225 174224 4 IVEMSTSK Unmodified 893.45282 0.4528186 1949 P63241;Q9GZV4 EIF5A;EIF5A2 Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.79 1 3 1 10 2 2 1 1 1 1 1 1 1 1 1 1 1 25.523 24.99 2 0.0068171 19357 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 95.531 34.743 11428000000 1226700000 8511000000 151910000 0 63309000 127110000 101000000 75762000 54175000 186630000 313970000 276320000 101550000 238160000 0 25857 1949 23580 218099;218100;218101;218102;218103;218104;218105;218106;218107;218108;218109;218110;218111;218112;218113 174226;174227;174228;174229;174230;174231;174232;174233;174234;174235;174236;174237;174238 174227 11 IVEMSTSK Oxidation (M) 909.44773 0.44773322 1949 P63241;Q9GZV4 EIF5A;EIF5A2 Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-2 yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 6.26 3.94 2 5 4 12 4 6 1 1 1 1 1 1 1 1 1 1 1 1 1 15.745 14.792 2 0.0042056 3827 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 101.33 38.18 8544900000 921440000 5866100000 175710000 31155000 39635000 61758000 83425000 43037000 45694000 128220000 255870000 232120000 85081000 182570000 393100000 25858 1949 23580 218114;218115;218116;218117;218118;218119;218120;218121;218122;218123;218124;218125;218126;218127;218128;218129;218130;218131;218132;218133;218134;218135;218136 174239;174240;174241;174242;174243;174244;174245;174246;174247;174248;174249;174250;174251 174243 3130 12 IVENSDAVTEILNNAELLK Unmodified 2084.1001 0.10011456 2602 Q16401 PSMD5 26S proteasome non-ATPase regulatory subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 94.113 94.255 2 1.6185E-17 109565 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 96.734 83.966 8359900 0 0 0 0 0 0 0 0 0 4570100 2388500 0 0 1401300 0 25859 2602 23581 218137;218138;218139 174252 174252 1 IVEPLLPPPATQISDLSK Unmodified 1917.0823 0.082279652 3669 Q92833 JARID2 Protein Jumonji yes yes 0 0 0 By MS/MS 2 0 1 1 92.98 88.07 2 0.001886 109409 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 56.122 39.745 8427900 0 8427900 0 0 0 0 0 0 0 0 0 0 0 0 0 25860 3669 23582 218140 174253 174253 1 IVEPPENIQEK Unmodified 1294.6769 0.67688153 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.49 43.665 2 0.00066247 48978 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 132.01 92.862 413160000 0 0 0 25054000 21789000 36659000 29019000 30523000 24231000 37651000 43882000 41713000 45625000 32579000 44433000 25861 19 23583 218141;218142;218143;218144;218145;218146;218147;218148;218149;218150;218151;218152 174254;174255;174256;174257;174258;174259 174254 2 IVEPYNK Unmodified 861.45962 0.45961853 5047 Q9UP83 COG5 Conserved oligomeric Golgi complex subunit 5 yes yes 0 0 0 By MS/MS 2 0 1 1 25.797 21.594 2 0.030967 28186 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.14 51.922 89688000 0 89688000 0 0 0 0 0 0 0 0 0 0 0 0 0 25862 5047 23584 218153 174260 174260 1 IVEQDTMPPK Unmodified 1156.5798 0.57981002 170 O00571;O15523 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 31.217 31.356 2 0.0056999 34106 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 67.897 46.597 29884000 0 0 0 0 2545800 4141300 4300900 2099800 2574800 4882500 0 0 4285100 0 5053800 25863 170 23585 218154;218155;218156;218157;218158;218159;218160;218161;218162;218163;218164 174261;174262;174263;174264;174265;174266 174261 6 IVEQDTMPPK Oxidation (M) 1172.5747 0.57472465 170 O00571;O15523 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.62 1.7 1 20 1 2 2 1 2 2 2 2 2 1 2 2 20.776 20.982 2 0.00065703 21115 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 110.87 75.623 148440000 0 0 0 15746000 18426000 6095300 7270600 0 4040000 20479000 8054000 23926000 15171000 7620700 21614000 25864 170 23585 218165;218166;218167;218168;218169;218170;218171;218172;218173;218174;218175;218176;218177;218178;218179;218180;218181;218182;218183;218184;218185 174267;174268;174269;174270;174271;174272;174273;174274;174275;174276;174277;174278;174279;174280;174281;174282;174283;174284;174285;174286;174287 174282 239 20 IVEQENAIQTMELR Oxidation (M) 1688.8403 0.84033482 5253 Q9Y5X2 SNX8 Sorting nexin-8 yes yes 0 1 0 By MS/MS 10 0 1 1 50.659 51.364 2 0.00038053 57612 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 87.363 55.52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25865 5253 23586 218186 174288 174288 6653 1 IVEQGHEDLVLSDISPK Unmodified 1877.9735 0.97345748 3436 Q8NEZ4 KMT2C Histone-lysine N-methyltransferase 2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 70.406 70.5 3 0.0022439 80229 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 43.454 37.423 14061000 0 0 0 0 0 3620600 0 0 0 3247600 0 0 3850900 3341700 0 25866 3436 23587 218187;218188;218189;218190 174289;174290 174290 2 IVEQPTVSVTEPK Unmodified 1425.7715 0.7715102 2489 Q15054 POLD3 DNA polymerase delta subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 51.725 50.219 2 1.6136E-19 57206 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 152.85 115.66 552160000 9962800 184620000 0 23958000 16551000 26013000 46959000 31608000 20205000 23186000 38269000 38372000 38469000 0 53988000 25867 2489 23588 218191;218192;218193;218194;218195;218196;218197;218198;218199;218200;218201;218202;218203;218204;218205;218206 174291;174292;174293;174294;174295;174296;174297;174298;174299;174300;174301;174302;174303;174304;174305;174306 174293 16 IVERDGLSEAAAQSR Unmodified 1600.8169 0.81689726 2230 Q13057 COASY Bifunctional coenzyme A synthase;Phosphopantetheine adenylyltransferase;Dephospho-CoA kinase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.12 33.304 3 3.6883E-20 36302 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 91.355 75.415 547670000 0 0 0 37277000 24309000 61731000 37810000 23842000 27667000 57217000 67928000 59153000 43035000 35369000 72335000 25868 2230 23589 218207;218208;218209;218210;218211;218212;218213;218214;218215;218216;218217;218218 174307;174308;174309;174310;174311;174312;174313;174314;174315;174316;174317;174318 174313 12 IVESDVGDSFYIR Unmodified 1498.7304 0.73037367 2136 Q07157 TJP1 Tight junction protein ZO-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 73.491 73.626 2 0.00096611 84845 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 79.693 41.4 28972000 0 0 0 0 0 8157000 0 0 7893500 7825600 0 5095900 0 0 0 25869 2136 23590 218219;218220;218221;218222;218223;218224 174319;174320;174321;174322;174323 174319 5 IVESTLFR Unmodified 963.53893 0.53893149 4433 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 56.903 57.264 2 0.011906 65390 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 75.854 25.83 31669000 0 0 0 0 0 5275900 0 6157200 0 0 5146500 8799200 0 0 6290000 25870 4433 23591 218225;218226;218227;218228;218229 174324;174325 174324 2 IVETEAYLGPEDEAAHSR Unmodified 1985.933 0.93304923 1246 P29372 MPG DNA-3-methyladenine glycosylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 54.228 54.369 3 0.00034397 60857 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.188 48.478 167830000 0 0 0 14309000 13949000 0 14405000 15446000 12771000 13036000 18322000 17733000 11805000 13164000 22893000 25871 1246 23592 218230;218231;218232;218233;218234;218235;218236;218237;218238;218239;218240 174326;174327;174328;174329;174330;174331;174332;174333;174334;174335;174336;174337;174338;174339;174340;174341;174342 174329 14 IVETHQPIVETYYGPGR Unmodified 1957.9898 0.98977625 4471 Q9H9E3 COG4 Conserved oligomeric Golgi complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 59.736 60.025 3 0.0029948 67707 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.844 35.514 53830000 0 0 0 0 0 0 4660200 4702600 0 9601700 4993800 6539200 7481600 6504400 9346400 25872 4471 23593 218241;218242;218243;218244;218245;218246;218247;218248 174343;174344;174345;174346 174344 4 IVETIEELK Unmodified 1072.6016 0.60159132 2390 Q14202 ZMYM3 Zinc finger MYM-type protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.386 58.462 2 0.0031256 65561 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.069 74.866 91618000 0 0 0 5507200 5345400 8105500 5555600 7637100 5257600 10619000 8258600 0 14341000 12058000 8932600 25873 2390 23594 218249;218250;218251;218252;218253;218254;218255;218256;218257;218258;218259;218260 174347;174348;174349;174350;174351;174352;174353;174354;174355;174356;174357 174350 10 IVETQNEEYPHTFQVSGK Unmodified 2105.0065 0.006548526 3923 Q96M96 FGD4 FYVE, RhoGEF and PH domain-containing protein 4 yes yes 0 0 0 By MS/MS 3 0 1 1 58.911 54.092 3 0.015684 66700 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 32.387 28.634 2598500 0 2598500 0 0 0 0 0 0 0 0 0 0 0 0 0 25874 3923 23595 218261 174358 174358 1 IVEVLGIPPAHILDQAPK Unmodified 1909.1037 0.1036838 2334 Q13627 DYRK1A Dual specificity tyrosine-phosphorylation-regulated kinase 1A yes yes 0 0 0 By MS/MS 2 0 1 1 93.291 85.16 3 0.0017304 110258 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 44.998 41.337 7759600 7759600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25875 2334 23596 218262 174359;174360 174360 2 IVEVLLMK Oxidation (M) 959.57254 0.5725398 1395 P38159;O75526 RBMX;RBMXL2 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA-binding motif protein, X-linked-like-2 yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 1 2 1 2 2 2 2 2 1 2 63.466 63.557 2 0.0064429 72380 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 81.784 81.784 157120000 0 0 0 14628000 12196000 6543200 18726000 4887500 15902000 16527000 12301000 19454000 12367000 5583400 18002000 25876 1395 23597 218263;218264;218265;218266;218267;218268;218269;218270;218271;218272;218273;218274;218275;218276;218277;218278;218279;218280;218281;218282;218283 174361;174362;174363;174364;174365;174366;174367;174368;174369;174370;174371;174372;174373 174367 2162 12 IVEVLLMK Unmodified 943.57763 0.57762518 1395 P38159;O75526 RBMX;RBMXL2 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA-binding motif protein, X-linked-like-2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.986 77.047 2 0.0053152 88537 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 107.32 95.596 81387000 0 0 0 4703700 3900900 6391100 4974800 5980400 5349400 7138600 6382000 9008700 4259900 5883200 17415000 25877 1395 23597 218284;218285;218286;218287;218288;218289;218290;218291;218292;218293;218294;218295 174374;174375;174376;174377;174378;174379;174380;174381;174382;174383;174384;174385 174378 12 IVFDSIDNLEAAPHDIGYVK Unmodified 2215.1161 0.11609898 4934 Q9UJ70 NAGK N-acetyl-D-glucosamine kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 89.475 84.321 3 1.0637E-06 106873 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.768 45.964 79670000 10787000 64225000 4657600 0 0 0 0 0 0 0 0 0 0 0 0 25878 4934 23598 218296;218297;218298 174386;174387;174388 174387 3 IVFLEEASQQEK Unmodified 1419.7246 0.72456001 5118 Q9Y2T3 GDA Guanine deaminase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.83 3.76 3 2 7 2 2 1 1 1 1 1 1 1 1 68.934 66.574 2 4.2549E-27 87757 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 212.03 169.92 1111300000 79241000 740840000 41978000 22361000 0 0 0 0 0 15117000 41066000 46364000 0 25013000 99325000 25879 5118 23599 218299;218300;218301;218302;218303;218304;218305;218306;218307;218308;218309;218310 174389;174390;174391;174392;174393;174394;174395;174396;174397;174398;174399;174400;174401;174402 174394 14 IVFSGNLFQHQEDSK Unmodified 1747.8529 0.85294842 4003 Q96TA1 FAM129B Niban-like protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.768 71.834 3 8.557E-07 82410 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 63.062 42.599 215330000 0 0 0 8102300 3650100 40969000 8562800 12747000 10579000 17959000 16507000 21272000 15583000 15999000 43401000 25880 4003 23600 218311;218312;218313;218314;218315;218316;218317;218318;218319;218320;218321;218322 174403;174404;174405;174406;174407;174408;174409;174410 174410 7 IVFSPEEAK Unmodified 1018.5335 0.53351176 4827 Q9P2R7 SUCLA2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 52.817 47.96 2 0.0080137 62369 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.318 52.526 82121000 0 77274000 4847000 0 0 0 0 0 0 0 0 0 0 0 0 25881 4827 23601 218323;218324 174411;174412 174411 2 IVFVPGCSIPLTIVK Unmodified 1641.9528 0.9527858 1733 P54136 RARS Arginine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 93.201 92.584 2 0.0028095 115418 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.815 46.21 99604000 39640000 0 0 0 0 4242000 947230 2890500 3315600 7315400 4753500 7961100 1836800 3803000 22899000 25882 1733 23602 218325;218326;218327;218328;218329;218330;218331;218332;218333;218334;218335 174413;174414;174415;174416;174417;174418;174419;174420 174414 8 IVFVTGNAK Unmodified 947.54402 0.54401687 4238 Q9BY32 ITPA Inosine triphosphate pyrophosphatase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 7.62 3.53 3 2 11 2 2 1 1 1 1 1 1 1 1 1 1 1 1 47.85 46.258 2 0.0075088 57466 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 97.093 60.073 994460000 527330000 160890000 30620000 0 12659000 54087000 17976000 19047000 11575000 27228000 22113000 27013000 17338000 19433000 47149000 25883 4238 23603 218336;218337;218338;218339;218340;218341;218342;218343;218344;218345;218346;218347;218348;218349;218350;218351 174421;174422;174423;174424;174425;174426;174427;174428 174423 4 IVGCSVHK Unmodified 898.46947 0.46947171 851 P07910;Q86SE5 HNRNPC;RALYL Heterogeneous nuclear ribonucleoproteins C1/C2;RNA-binding Raly-like protein yes no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 9.7322 8.9497 2 0.013016 10703 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 98.418 67.115 1986200000 1126600000 373840000 329070000 5483100 9235200 9263600 12253000 7877400 6678800 6402100 0 33514000 26665000 16214000 23141000 25884 851 23604 218352;218353;218354;218355;218356;218357;218358;218359;218360;218361;218362;218363;218364;218365;218366 174429;174430;174431;174432;174433;174434;174435;174436 174431 5 IVGDLFGAGK Unmodified 975.53893 0.53893149 4049 Q99707 MTR Methionine synthase yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 72.942 65.98 2 0.0084193 83859 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.334 42.841 77933000 18631000 59302000 0 0 0 0 0 0 0 0 0 0 0 0 0 25885 4049 23605 218367;218368 174437 174437 1 IVGDYQQLEER Unmodified 1348.6623 0.6622941 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 50.351 50.215 2 9.08E-05 56754 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 111.06 71.752 28704000 0 0 0 8051200 0 0 9073900 11579000 0 0 0 0 0 0 0 25886 2446 23606 218369;218370;218371 174438;174439;174440 174439 3 IVGELEQMVSEDVPLDHR Oxidation (M) 2081.0099 0.0099193444 2033 Q00341 HDLBP Vigilin yes yes 0 1 0 By MS/MS 10 0 1 1 77.104 77.369 3 3.7669E-05 88875 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.203 53.383 26335000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26335000 25887 2033 23607 218372 174441 174441 3290 1 IVGGSAAPPGAWPWLVR Unmodified 1732.9413 0.94130991 904 P0CW18 PRSS56 Serine protease 56 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 90.966 91.104 2 0.0051271 105552 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.917 30.913 23374000 0 0 0 0 0 2047700 0 2052800 1526700 2752500 2147400 3210800 0 1441500 8194900 25888 904 23608 218373;218374;218375;218376;218377;218378;218379;218380 174442;174443 174443 2 IVGNGSEQQLQK Unmodified 1299.6783 0.67827852 5171 Q9Y3P9 RABGAP1 Rab GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.213 22.418 2 3.0524E-08 22268 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 130.66 82.232 67823000 0 0 0 3021200 2520300 6829700 4042100 3293300 2723700 8495500 6551900 8808600 7568500 4773800 9193900 25889 5171 23609 218381;218382;218383;218384;218385;218386;218387;218388;218389;218390;218391;218392 174444;174445;174446;174447;174448;174449;174450;174451;174452;174453;174454 174451 11 IVGPEENLSQAEAR Unmodified 1511.758 0.7579854 159 O00469 PLOD2 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 53.266 47.922 2 1.4494E-05 61652 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.7 97.482 35650000 0 35650000 0 0 0 0 0 0 0 0 0 0 0 0 0 25890 159 23610 218393;218394 174455;174456;174457 174455 3 IVGWYHTGPK Unmodified 1156.6029 0.60292873 1668 P51665 PSMD7 26S proteasome non-ATPase regulatory subunit 7 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 2 1 1 42.894 43.069 2;3 0.0018649 48302 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 78.655 66.079 397910000 0 0 0 25699000 26759000 36801000 12310000 10887000 16341000 51856000 65630000 85106000 15041000 22995000 28488000 25891 1668 23611 218395;218396;218397;218398;218399;218400;218401;218402;218403;218404;218405;218406;218407 174458;174459;174460;174461;174462;174463;174464;174465;174466;174467;174468;174469 174459 8 IVGYVLAK Unmodified 861.53239 0.53238955 1435 P41227;Q9BSU3 NAA10;NAA11 N-alpha-acetyltransferase 10;N-alpha-acetyltransferase 11 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.24 2.35 2 19 1 1 1 2 1 2 2 2 2 2 3 1 1 52.691 52.179 1;2 0.0068885 59203 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 92.191 46.239 11713000000 208330000 56405000 0 41956000 102560000 118190000 679700000 720590000 887560000 1847600000 2838300000 4143500000 0 19229000 49473000 25892 1435 23612 218408;218409;218410;218411;218412;218413;218414;218415;218416;218417;218418;218419;218420;218421;218422;218423;218424;218425;218426;218427;218428 174470;174471;174472;174473;174474;174475;174476;174477;174478;174479;174480;174481;174482;174483 174480 11 IVHIANDLFLQEQK Unmodified 1666.9043 0.90425571 1494 P46020 PHKA1 Phosphorylase b kinase regulatory subunit alpha, skeletal muscle isoform yes yes 0 0 0 By MS/MS 2 0 1 1 82.977 74.847 3 5.1625E-30 97884 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 109.15 103.69 18036000 18036000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25893 1494 23613 218429 174484 174484 1 IVHKGDECILK Unmodified 1310.7017 0.70165649 1029 P15924 DSP Desmoplakin yes yes 0 0 1 By MS/MS By MS/MS By matching 10 0 3 1 1 1 23.918 23.743 3 0.040552 25211 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 47.971 34.292 18309000 0 0 0 15299000 1712200 1298300 0 0 0 0 0 0 0 0 0 25894 1029 23614 218430;218431;218432 174485 174485 0 IVIATNIAETSITIDDVVYVIDGGK Unmodified 2618.4055 0.40546428 4373 Q9H2U1 DHX36 ATP-dependent RNA helicase DHX36 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 102.4 96.532 3 0.00078495 121924 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 37.526 33.631 16212000 16212000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25895 4373 23615 218433;218434 174486;174487 174487 2 IVIDFDSINSRPSQK Unmodified 1717.8999 0.89989861 1319 P32321 DCTD Deoxycytidylate deaminase yes yes 0 0 1 By MS/MS 10 0 1 1 71.384 71.787 3 0.0041621 82051 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 31.677 13.313 7580900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7580900 25896 1319 23616 218435 174488 174488 1 IVIGYQSHADTATK Unmodified 1502.7729 0.77290718 826 P06730 EIF4E Eukaryotic translation initiation factor 4E yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.07 3.76 8 3 18 5 4 2 2 2 1 2 1 2 1 1 2 1 1 2 40.055 38.043 2;3 1.6419E-15 47798 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 107.35 89.604 2810800000 1700200000 224520000 229080000 25008000 26800000 55214000 33156000 37547000 34325000 59142000 72677000 90605000 51476000 54311000 116810000 25897 826 23617 218436;218437;218438;218439;218440;218441;218442;218443;218444;218445;218446;218447;218448;218449;218450;218451;218452;218453;218454;218455;218456;218457;218458;218459;218460;218461;218462;218463;218464 174489;174490;174491;174492;174493;174494;174495;174496;174497;174498;174499;174500;174501;174502;174503;174504;174505;174506;174507;174508;174509;174510;174511;174512;174513;174514;174515;174516 174509 23 IVILDEADSMTSAAQAALR Oxidation (M) 1990.0041 0.004105685 1347 P35249 RFC4 Replication factor C subunit 4 yes yes 0 1 0 By MS/MS By matching 10 0 2 1 1 79.102 79.25 2 7.2021E-24 91629 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 98.942 83.052 10840000 0 0 0 0 0 0 0 0 0 6358000 4481700 0 0 0 0 25898 1347 23618 218465;218466 174517 174517 2047 1 IVILDEADSMTSAAQAALRR Oxidation (M) 2146.1052 0.10521671 1347 P35249 RFC4 Replication factor C subunit 4 yes yes 0 1 1 By MS/MS By matching By MS/MS 10 0 3 1 1 1 76.106 76.073 3 0.0001994 86993 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.382 35.219 40563000 0 0 0 1796300 0 0 0 0 0 0 0 0 5740400 0 33026000 25899 1347 23619 218467;218468;218469 174518 174518 2047 1 IVILEYQPSK Unmodified 1188.6754 0.67542497 2528 Q15393 SF3B3 Splicing factor 3B subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 68.695 68.678 2 0.0021721 78690 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 85.862 55.442 675340000 0 0 0 49534000 63041000 0 110980000 83940000 83572000 131440000 0 152830000 0 0 0 25900 2528 23620 218470;218471;218472;218473;218474;218475;218476 174519;174520;174521 174520 2 IVILPDYLEIAR Unmodified 1413.8232 0.82315184 1488 P45974 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 92.387 92.502 2 0.0019141 107373 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 76.465 37.317 42304000 0 0 0 0 0 3654000 0 0 0 6800100 5010300 0 1927900 3496100 21415000 25901 1488 23621 218477;218478;218479;218480;218481;218482;218483 174522;174523;174524;174525;174526;174527;174528 174523 7 IVIPLIEEASK Unmodified 1210.7173 0.71728978 1747 P54750 PDE1A Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 86.763 85.418 2 0.00068609 107290 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.89 75.59 232680000 9711000 160700000 18618000 0 0 5033600 3106900 2734500 0 4402300 5547100 6019500 3602900 3592800 9615300 25902 1747 23622 218484;218485;218486;218487;218488;218489;218490;218491;218492;218493;218494;218495;218496;218497 174529;174530;174531;174532;174533;174534;174535;174536;174537;174538;174539;174540 174532 12 IVIPNEESVVIYYK Unmodified 1664.9025 0.90252437 1451 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 86.911 82.254 2 0.0008208 104123 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.944 64.573 24102000 7938400 14952000 1211700 0 0 0 0 0 0 0 0 0 0 0 0 25903 1451 23623 218498;218499;218500;218501 174541;174542;174543 174543 3 IVIPTDLER Unmodified 1054.6023 0.60226003 1789 P56962 STX17 Syntaxin-17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.446 70.521 2 0.0059097 81401 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 76.478 57.695 84000000 0 0 0 5774200 4527600 5641600 6533200 6618500 4894000 6782100 8904700 10430000 7879200 4959200 11056000 25904 1789 23624 218502;218503;218504;218505;218506;218507;218508;218509;218510;218511;218512;218513 174544;174545;174546;174547;174548;174549;174550;174551;174552;174553 174553 10 IVITDCGQLS Unmodified 1104.5485 0.5485099 1278 P30405 PPIF Peptidyl-prolyl cis-trans isomerase F, mitochondrial yes yes 0 0 0 By MS/MS 1 0 1 1 103.82 109.08 2 0.010628 89221 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 74.184 59.408 16200000 16200000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25905 1278 23625 218514 174554 174554 1 IVKPAEIPELK Unmodified 1235.7489 0.74892426 4215 Q9BWU0 SLC4A1AP Kanadaptin yes yes 0 0 1 By MS/MS 2 0 1 1 68.92 63.021 3 0.032624 80389 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 36.447 27.014 14654000 0 14654000 0 0 0 0 0 0 0 0 0 0 0 0 0 25906 4215 23626 218515 174555 174555 1 IVKPNGEKPDEFESGISQALLELEMNSDLK Unmodified 3329.6701 0.67008818 1871 P62081 RPS7 40S ribosomal protein S7 yes yes 0 0 2 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 98.054 92.335 4 3.3455E-50 116690 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.12 88.833 68215000 64522000 3693000 0 0 0 0 0 0 0 0 0 0 0 0 0 25907 1871 23627 218516;218517 174556;174557 174557 2 IVKPNGEKPDEFESGISQALLELEMNSDLK Oxidation (M) 3345.665 0.6650028 1871 P62081 RPS7 40S ribosomal protein S7 yes yes 0 1 2 By MS/MS 2 0 1 1 98.198 90.068 3 9.7209E-19 116260 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.82 69.854 10689000 10689000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25908 1871 23627 218518 174558 174558 3028 1 IVLAAQAISR Unmodified 1040.6342 0.63422886 4916 Q9UI10 EIF2B4 Translation initiation factor eIF-2B subunit delta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 57.016 57.123 2 0.032639 64947 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 42.348 9.5079 17303000 0 0 0 0 0 7211700 6613700 0 3477400 0 0 0 0 0 0 25909 4916 23628 218519;218520;218521 174559 174559 1 IVLANDPDADRLAVAEK Unmodified 1808.9632 0.96322715 3844 Q96G03 PGM2 Phosphoglucomutase-2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 63.444 63.607 3 3.6321E-07 72683 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 65.107 57.698 105720000 0 0 0 11043000 0 0 5085200 0 0 9503300 16158000 11940000 4682800 12220000 35082000 25910 3844 23629 218522;218523;218524;218525;218526;218527;218528;218529;218530 174560;174561;174562;174563;174564;174565;174566;174567;174568;174569;174570;174571 174565 12 IVLDNSVFSEHR Unmodified 1414.7205 0.72047768 2040;1723 P53675;Q00610 CLTCL1;CLTC Clathrin heavy chain 2;Clathrin heavy chain 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 1 2 2 2 2 2 1 2 64.182 64.264 2;3 8.3559E-10 72753 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 132.88 124.13 712630000 0 0 0 24562000 20590000 74671000 36313000 28139000 24955000 55450000 75225000 82661000 44692000 58541000 186830000 25911 1723;2040 23630 218531;218532;218533;218534;218535;218536;218537;218538;218539;218540;218541;218542;218543;218544;218545;218546;218547;218548;218549;218550;218551;218552 174572;174573;174574;174575;174576;174577;174578;174579;174580;174581;174582;174583;174584;174585;174586;174587;174588;174589;174590 174578 7 IVLDSDAAEYGGHQR Unmodified 1629.7747 0.7746981 2101 Q04446 GBE1 1,4-alpha-glucan-branching enzyme yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 44.207 44.706 3 0.0070362 48945 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 27.208 21.045 27603000 0 0 0 0 0 0 0 0 0 0 0 0 0 9297600 18306000 25912 2101 23631 218553;218554 174591 174591 1 IVLEDGTLHVTEGSGR Unmodified 1681.8635 0.8635131 2613 Q16555 DPYSL2 Dihydropyrimidinase-related protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 60.719 60.828 3 0.0014249 68669 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.348 33.92 49244000 0 0 0 0 2285000 0 0 4630200 0 0 0 0 5026800 0 37302000 25913 2613 23632 218555;218556;218557;218558 174592;174593;174594 174593 3 IVLENSSREDK Unmodified 1288.6623 0.6622941 3895 Q96JJ3 ELMO2 Engulfment and cell motility protein 2 no no 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 18.855 19.043 3 0.0081482 19773 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 35.664 15.534 30188000 0 0 0 0 2226300 4325700 2472100 0 2122200 4157500 0 5254400 0 3414100 6216200 25914 3895 23633 218559;218560;218561;218562;218563;218564;218565;218566 174595 174595 1 IVLHTEQK Unmodified 966.54983 0.54983053 3453 Q8NG31 CASC5 Protein CASC5 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 19.586 16.499 2 0.010984 20976 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 110.81 46.004 12765000 0 5968500 6796900 0 0 0 0 0 0 0 0 0 0 0 0 25915 3453 23634 218567;218568 174596 174596 1 IVLLDSSLEYK Unmodified 1278.7071 0.70711903 1570 P49368 CCT3 T-complex protein 1 subunit gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 4 2 12 3 3 1 1 1 1 1 1 1 1 1 1 1 1 79.856 78.794 2 0.00035883 91248 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 111.65 88.223 2149500000 40705000 215910000 0 44853000 76539000 159520000 101100000 101990000 135750000 207550000 201430000 244700000 115310000 188850000 315320000 25916 1570 23635 218569;218570;218571;218572;218573;218574;218575;218576;218577;218578;218579;218580;218581;218582;218583;218584;218585;218586 174597;174598;174599;174600;174601;174602;174603;174604;174605;174606;174607;174608;174609;174610;174611;174612;174613;174614;174615;174616;174617;174618;174619;174620 174611 24 IVLLDSSLEYKK Unmodified 1406.8021 0.80208205 1570 P49368 CCT3 T-complex protein 1 subunit gamma yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 1 1 1 2 1 2 2 2 2 1 2 69.694 69.831 2;3 0.0005819 80521 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 55.98 48.251 202130000 0 0 0 7380300 6722300 9378000 12171000 15296000 9037600 17583000 22427000 30219000 13854000 15492000 42566000 25917 1570 23636 218587;218588;218589;218590;218591;218592;218593;218594;218595;218596;218597;218598;218599;218600;218601;218602;218603;218604 174621;174622;174623;174624;174625;174626;174627;174628;174629;174630;174631;174632;174633;174634;174635;174636;174637 174621 15 IVLLSANSIR Unmodified 1084.6604 0.66044361 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.831 71.9 2 0.0029707 82588 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 78.264 28.137 217630000 0 0 0 11301000 12493000 16546000 15881000 14405000 11144000 24714000 19578000 23672000 17179000 20767000 29945000 25918 619 23637 218605;218606;218607;218608;218609;218610;218611;218612;218613;218614;218615;218616 174638;174639;174640;174641;174642;174643;174644;174645;174646;174647;174648;174649 174639 12 IVLNGIDLK Unmodified 983.60153 0.60153174 271 O15294 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.642 74.708 2 0.0031541 85484 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 92.439 22.172 323090000 0 0 0 12938000 17769000 23618000 26311000 26520000 18007000 28541000 33907000 36083000 26411000 27094000 45893000 25919 271 23638 218617;218618;218619;218620;218621;218622;218623;218624;218625;218626;218627;218628 174650;174651;174652;174653;174654;174655;174656;174657;174658;174659;174660;174661 174653 12 IVLQGNQLAALTQAK Unmodified 1566.9093 0.90934108 4517 Q9HCK8 CHD8 Chromodomain-helicase-DNA-binding protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.756 78.814 2 1.0509E-28 91143 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 143.79 127.16 203080000 0 0 0 8637400 13737000 13019000 16692000 12874000 17149000 22250000 19253000 21084000 15295000 16446000 26640000 25920 4517 23639 218629;218630;218631;218632;218633;218634;218635;218636;218637;218638;218639;218640 174662;174663;174664;174665;174666;174667;174668;174669;174670;174671;174672;174673;174674 174667 13 IVLQIDNAR Unmodified 1040.5978 0.59784335 814;68 P05783;CON__P08727;P08727 KRT18;KRT19 Keratin, type I cytoskeletal 18;Keratin, type I cytoskeletal 19 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 2 2 1 1 1 1 1 55.372 55.507 2 3.4069E-20 62509 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 174.27 101.23 + 9002700000 0 0 0 418350000 713570000 672810000 800910000 743390000 546980000 796510000 910270000 937770000 794860000 753150000 914130000 25921 814;68 23640 218641;218642;218643;218644;218645;218646;218647;218648;218649;218650;218651;218652;218653;218654 174675;174676;174677;174678;174679;174680;174681;174682;174683;174684;174685;174686;174687;174688;174689;174690;174691;174692;174693;174694;174695;174696;174697;174698;174699;174700;174701;174702;174703 174677 28 IVLTNPVCTEVGEK Unmodified 1557.8072 0.80724378 1427 P41091;Q2VIR3 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 69.854 68.216 2;3 4.2256E-18 87343 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 147.91 119.18 3428100000 104960000 2437700000 33712000 33011000 47943000 67544000 54825000 47117000 42386000 75110000 93846000 96510000 73851000 86646000 132970000 25922 1427 23641 218655;218656;218657;218658;218659;218660;218661;218662;218663;218664;218665;218666;218667;218668;218669;218670;218671 174704;174705;174706;174707;174708;174709;174710;174711;174712;174713;174714;174715;174716;174717;174718;174719;174720;174721;174722;174723;174724 174709 20 IVLVLPHDPSFAIK Unmodified 1547.9076 0.90755017 2713 Q56NI9 ESCO2 N-acetyltransferase ESCO2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 85.345 85.465 3 0.00092945 99215 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.625 43.448 12320000 0 0 0 0 0 0 0 0 0 5710600 0 6609100 0 0 0 25923 2713 23642 218672;218673 174725;174726;174727 174727 3 IVMEAIQQASVAK Unmodified 1386.7541 0.754086 3490 Q8TCS8 PNPT1 Polyribonucleotide nucleotidyltransferase 1, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 70.366 63.298 2 3.8114E-08 80970 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 139.15 95.871 54749000 12186000 42563000 0 0 0 0 0 0 0 0 0 0 0 0 0 25924 3490 23643 218674;218675 174728;174729;174730;174731 174730 4 IVMETVPVLK Unmodified 1127.6624 0.66241744 5288 Q9Y6K9 IKBKG NF-kappa-B essential modulator yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76.085 75.613 2 0.0040832 94108 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.318 91.318 396450000 0 315020000 8113300 3010500 3224400 4365100 2921700 3683200 3431000 6233800 8828300 8545300 3931800 7826100 17309000 25925 5288 23644 218676;218677;218678;218679;218680;218681;218682;218683;218684;218685;218686;218687;218688;218689 174732;174733;174734;174735;174736;174737;174738 174733 7 IVMFTIDIGEAPK Oxidation (M) 1448.7585 0.75850267 2519 Q15363 TMED2 Transmembrane emp24 domain-containing protein 2 yes yes 0 1 0 By MS/MS 2 0 1 1 89.683 81.553 2 0.0036326 105889 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.979 57.391 12799000 12799000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25926 2519 23645 218690 174739 174739 4141 1 IVMFTIDIGEAPK Unmodified 1432.7636 0.76358805 2519 Q15363 TMED2 Transmembrane emp24 domain-containing protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 95.392 87.261 2 3.3548E-06 112702 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.52 94.435 16679000 16679000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25927 2519 23645 218691 174740 174740 1 IVMLVNENPLLTEEAALNK Oxidation (M) 2126.1293 0.1293062 3221 Q8IV38 ANKMY2 Ankyrin repeat and MYND domain-containing protein 2 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 91.952 87.89 2 2.5657E-90 109314 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 182.02 160.79 21201000 0 21201000 0 0 0 0 0 0 0 0 0 0 0 0 0 25928 3221 23646 218692;218693 174741 174741 4839 1 IVMLVNENPLLTEEAALNK Unmodified 2110.1344 0.13439158 3221 Q8IV38 ANKMY2 Ankyrin repeat and MYND domain-containing protein 2 yes yes 0 0 0 By MS/MS 2 0 2 2 96.694 91.873 2;3 0.00029198 113863 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 56.121 50.311 29750000 0 29750000 0 0 0 0 0 0 0 0 0 0 0 0 0 25929 3221 23646 218694;218695 174742;174743;174744 174742 2 IVMSQLNPLK Unmodified 1141.6529 0.65291539 4753 Q9NYV6 RRN3 RNA polymerase I-specific transcription initiation factor RRN3 no no 0 0 0 By MS/MS 10 0 1 1 73.654 73.84 2 0.01279 85071 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 51.854 22.705 2781000 0 0 0 0 0 0 0 2781000 0 0 0 0 0 0 0 25930 4753 23647 218696 174745 174745 1 IVNDDQSFYADIYMEDGLIK Oxidation (M) 2364.0831 0.083143867 2613 Q16555;Q14195 DPYSL2;DPYSL3 Dihydropyrimidinase-related protein 2;Dihydropyrimidinase-related protein 3 yes no 0 1 0 By MS/MS By MS/MS 2.25 0.433 3 1 2 2 91.197 85.101 2;3 1.3597E-23 107682 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.24 97.604 52901000 19192000 33708000 0 0 0 0 0 0 0 0 0 0 0 0 0 25931 2613 23648 218697;218698;218699;218700 174746;174747;174748 174746 4266 3 IVNDDQSFYADIYMEDGLIK Unmodified 2348.0882 0.088229245 2613 Q16555;Q14195 DPYSL2;DPYSL3 Dihydropyrimidinase-related protein 2;Dihydropyrimidinase-related protein 3 yes no 0 0 0 By MS/MS 2.5 0.5 2 2 4 94.045 88.992 2;3 1.1775E-13 112510 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 127.71 118.42 38304000 38304000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25932 2613 23648 218701;218702;218703;218704 174749;174750;174751;174752;174753 174752 5 IVNGHLQPNLVDLCASVAELDDK Unmodified 2519.269 0.26898758 3311 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 yes yes 0 0 0 By MS/MS 2 0 1 1 93.158 85.028 3 0.0031182 110180 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 32.288 25.094 15770000 15770000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25933 3311 23649 218705 174754;174755 174755 2 IVNHWASPELR Unmodified 1320.6939 0.693869 242 O15027 SEC16A Protein transport protein Sec16A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 50.552 50.69 3 0.0002193 57237 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 74.611 66.201 128650000 0 0 0 11536000 0 0 12104000 0 0 17933000 0 0 34282000 22300000 30495000 25934 242 23650 218706;218707;218708;218709;218710;218711;218712;218713 174756;174757;174758;174759;174760 174760 4 IVNLGSSK Unmodified 816.47052 0.47051757 3067 Q7RTV0 PHF5A PHD finger-like domain-containing protein 5A yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 23.183 22.591 2 0.002399 27649 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 126.28 22.994 1944500000 0 1003400000 13426000 31413000 36140000 50538000 43976000 42937000 36315000 71417000 113700000 150600000 96930000 103440000 150170000 25935 3067 23651 218714;218715;218716;218717;218718;218719;218720;218721;218722;218723;218724;218725;218726;218727;218728 174761;174762;174763;174764;174765;174766;174767;174768;174769 174766 2 IVNQPSSLFGSK Unmodified 1275.6823 0.68230126 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 58.918 58.901 2 2.6463E-08 66231 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 157.38 107.25 173250000 0 0 0 32126000 0 55207000 0 0 0 0 0 0 0 0 85914000 25936 3119 23652 218729;218730;218731 174770;174771 174771 2 IVNSAQTGSFK Unmodified 1150.5982 0.59823728 567 O75964 ATP5L ATP synthase subunit g, mitochondrial yes yes 0 0 0 By MS/MS 10 0 1 1 27.729 27.48 2 0.035522 29684 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 37.556 26.336 2772100 0 0 0 2772100 0 0 0 0 0 0 0 0 0 0 0 25937 567 23653 218732 174772 174772 1 IVNSFLCLVPDDAK Unmodified 1589.8123 0.81232916 2836 Q5W0V3 FAM160B1 Protein FAM160B1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 88.693 88.098 2 0.00082086 109765 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.31 78.227 46502000 0 34969000 0 0 0 1641400 0 0 0 2094000 1855000 1968000 0 996350 2977900 25938 2836 23654 218733;218734;218735;218736;218737;218738;218739 174773;174774;174775;174776;174777;174778;174779 174775 7 IVNSSMELAQTAK Unmodified 1390.7126 0.71261511 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 47.082 46.274 2 5.8408E-21 58933 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.75 97.558 114410000 0 41115000 0 0 0 10461000 0 0 0 25802000 0 22592000 0 0 14436000 25939 5189 23655 218740;218741;218742;218743;218744;218745;218746;218747;218748;218749;218750 174780;174781;174782;174783;174784;174785;174786;174787;174788;174789;174790;174791 174784 12 IVNSSMELAQTAK Oxidation (M) 1406.7075 0.70752973 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 33.156 33.427 2 7.3179E-09 36095 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 110.39 89.015 57150000 0 0 0 0 4544000 6098300 0 5560200 0 8221700 6447600 8933400 7125800 4719800 5499600 25940 5189 23655 218751;218752;218753;218754;218755;218756;218757;218758;218759 174792;174793;174794;174795;174796;174797;174798;174799;174800 174799 6582 8 IVNTPFQVLMNSEK Unmodified 1618.8389 0.83887826 3620 Q92544 TM9SF4 Transmembrane 9 superfamily member 4 yes yes 0 0 0 By MS/MS 10 0 1 1 87.085 87.244 2 0.041109 100849 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.718 32.194 3465100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3465100 25941 3620 23656 218760 174801 174801 1 IVNTPQGCLWYK Unmodified 1477.7388 0.73877028 375 O43847 NRD1 Nardilysin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 69.935 68.259 2 1.0545E-12 88891 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 127.4 103.31 160170000 69288000 51102000 0 0 0 0 0 0 0 0 6268400 7264300 5711200 6083100 14453000 25942 375 23657 218761;218762;218763;218764;218765;218766;218767 174802;174803;174804;174805;174806;174807;174808 174804 7 IVNVSLADLR Unmodified 1098.6397 0.63970816 4489 Q9HAU0 PLEKHA5 Pleckstrin homology domain-containing family A member 5 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 76.25 76.283 2 0.0068811 88212 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 63.816 40.745 32457000 0 0 0 1622300 2117900 2571900 2053400 0 0 3818000 4052500 4668800 2929200 4065700 4557600 25943 4489 23658 218768;218769;218770;218771;218772;218773;218774;218775;218776;218777 174809;174810;174811;174812 174812 4 IVNVTSLATEGGLVDMGGSK Oxidation (M) 1962.9932 0.99320665 3241 Q8IWI9 MGA MAX gene-associated protein yes yes 0 1 0 By MS/MS By matching By MS/MS By matching 10 0 4 1 1 1 1 80.204 80.206 2 0.00096012 92767 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 41.644 32.69 10326000 0 0 0 0 2419700 3806900 2379600 0 0 0 0 0 0 1719800 0 25944 3241 23659 218778;218779;218780;218781 174813 174813 4854 1 IVPAPKPEPVSLVLK Unmodified 1585.9807 0.98071511 4487 Q9HAP2 MLXIP MLX-interacting protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 75.682 75.747 3 0.0036445 87246 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 42.242 38.77 125730000 0 0 0 8368400 7808600 0 10609000 12141000 8223500 11506000 12676000 18743000 0 13694000 21959000 25945 4487 23660 218782;218783;218784;218785;218786;218787;218788;218789;218790;218791 174814;174815;174816;174817;174818;174819;174820;174821;174822 174815 8 IVPASFSCEAAQTK Unmodified 1507.7341 0.73407884 3525 Q8TF40 FNIP1 Folliculin-interacting protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 57.052 51.715 2 0.011785 66438 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 54.27 30.42 52734000 0 52734000 0 0 0 0 0 0 0 0 0 0 0 0 0 25946 3525 23661 218792;218793 174823 174823 1 IVPEWQDYDQEIK Unmodified 1661.7937 0.7937022 4751 Q9NYU2 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 76.649 76.34 2 1.4104E-08 87827 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 130.94 118.73 207720000 0 102620000 0 3330300 4488400 11679000 3459900 6503700 6908900 9108700 10119000 12029000 4835500 7350500 25293000 25947 4751 23662 218794;218795;218796;218797;218798;218799;218800;218801;218802;218803;218804;218805;218806 174824;174825;174826;174827;174828;174829;174830;174831;174832;174833;174834;174835;174836 174829 13 IVPGLPSGWAK Unmodified 1123.639 0.63897988 1420 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 76.314 76.414 2 0.036836 87378 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 37.344 24.756 39573000 0 0 0 0 1222200 1949200 2928600 0 2939800 4212000 5368800 5334000 2580700 4021400 9016500 25948 1420 23663 218807;218808;218809;218810;218811;218812;218813;218814;218815;218816 174837 174837 1 IVPGQFLAVDPK Unmodified 1282.7285 0.72852317 2528 Q15393 SF3B3 Splicing factor 3B subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.816 78.874 2 0.0033507 90828 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 70.977 53.541 1664900000 0 0 0 59529000 80030000 86820000 111060000 118630000 80716000 149350000 173870000 199420000 134560000 186090000 284870000 25949 2528 23664 218817;218818;218819;218820;218821;218822;218823;218824;218825;218826;218827;218828 174838;174839;174840;174841;174842;174843;174844;174845;174846;174847;174848;174849;174850 174841 13 IVPNVLLEQGK Unmodified 1208.7129 0.71287311 490 O75390 CS Citrate synthase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.9 3.81 3 1 6 1 2 1 1 1 1 1 1 1 72.505 70.628 2 0.013168 80257 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.819 37.842 1096400000 49161000 971260000 19636000 5519800 0 0 0 3745300 0 0 8536600 7207300 0 4608400 26689000 25950 490 23665 218829;218830;218831;218832;218833;218834;218835;218836;218837;218838 174851;174852;174853;174854;174855;174856;174857;174858 174852 8 IVPQSQVPNPESPGK Unmodified 1575.8257 0.82567103 5000 Q9ULM3 YEATS2 YEATS domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.371 45.541 2 0.00029715 51704 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 67.153 50.9 99234000 0 0 0 6989400 7795300 7818800 5804000 5815100 5193700 11208000 13441000 16450000 7109000 5532100 6076900 25951 5000 23666 218839;218840;218841;218842;218843;218844;218845;218846;218847;218848;218849;218850 174859;174860;174861;174862;174863;174864;174865;174866;174867 174866 9 IVPTVYEDK Unmodified 1062.5597 0.55972651 3729 Q969X5 ERGIC1 Endoplasmic reticulum-Golgi intermediate compartment protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.53 2.94 1 2 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 43.394 42.759 2 0.019416 54492 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.478 41.182 499900000 237680 281420000 0 17611000 13699000 15640000 17297000 15778000 10219000 16297000 24747000 26364000 18547000 16668000 25371000 25952 3729 23667 218851;218852;218853;218854;218855;218856;218857;218858;218859;218860;218861;218862;218863;218864;218865 174868;174869;174870 174868 3 IVPVEITISLLK Unmodified 1323.8377 0.83773927 1268 P30085 CMPK1 UMP-CMP kinase yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 98.998 90.867 2 0.0046896 117192 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.228 53.175 24810000 24810000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25953 1268 23668 218866;218867 174871;174872 174872 2 IVPVVSQSECK Unmodified 1244.6435 0.64347291 3037 Q76L83 ASXL2 Putative Polycomb group protein ASXL2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.076 39.256 2 0.0023696 43411 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 68.016 42.879 72021000 0 0 0 4982500 4961000 5525000 5379200 4973700 3704700 6761600 6429600 7528900 7773100 7185500 6815900 25954 3037 23669 218868;218869;218870;218871;218872;218873;218874;218875;218876;218877;218878;218879 174873;174874;174875;174876;174877;174878;174879;174880;174881;174882;174883 174878 11 IVQEDRAVESR Unmodified 1300.6735 0.67352749 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16.633 16.042 3 0.00042387 15670 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 73.632 32.468 211650000 6899100 20909000 31347000 8106000 5853000 8624400 11543000 10874000 6079100 11133000 17972000 24799000 10923000 15520000 21065000 25955 2392 23670 218880;218881;218882;218883;218884;218885;218886;218887;218888;218889;218890;218891;218892;218893;218894 174884;174885;174886;174887;174888;174889;174890 174885 7 IVQEDRAVESRTTDLLTDWEK Unmodified 2503.2554 0.255446 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 2 By MS/MS 2 0 1 1 83.82 75.689 4 0.0007074 98863 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.392 30.023 25447000 25447000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25956 2392 23671 218895 174891 174891 1 IVQEFGK Unmodified 819.44905 0.44905385 676 O95630 STAMBP STAM-binding protein yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 31.23 26.112 2 0.032088 34075 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.866 43.82 270570000 41782000 228790000 0 0 0 0 0 0 0 0 0 0 0 0 0 25957 676 23672 218896;218897 174892 174892 1 IVQIPFCGEIDCEDWIK Unmodified 2120.9911 0.99109816 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 95.475 91.952 2 5.9906E-13 113868 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.38 102.62 73255000 0 71382000 1872900 0 0 0 0 0 0 0 0 0 0 0 0 25958 848 23673 218898;218899;218900;218901 174893;174894;174895;174896 174893 4 IVQISGNSMPR Oxidation (M) 1216.6234 0.62340617 4697 Q9NWH9 SLTM SAFB-like transcription modulator yes yes 0 1 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 31.77 31.865 2 0.0076117 34671 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 48.423 31.95 11388000 0 0 0 0 0 4114900 0 0 2984300 4288500 0 0 0 0 0 25959 4697 23674 218902;218903;218904 174897;174898 174898 6099 2 IVQISGNSMPR Unmodified 1200.6285 0.62849155 4697 Q9NWH9 SLTM SAFB-like transcription modulator yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 8 1 1 1 1 1 1 1 1 48.617 48.645 2 0.00099265 54891 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 90.15 67.659 42847000 0 0 0 5101300 7082900 0 5115500 4934200 0 7470100 0 0 0 3418700 9724100 25960 4697 23674 218905;218906;218907;218908;218909;218910;218911;218912 174899;174900;174901;174902 174900 4 IVQLGGSNAQR Unmodified 1141.6204 0.62036971 2753 Q5R3I4 TTC38 Tetratricopeptide repeat protein 38 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 27.897 28.187 2 0.010914 29206 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 49.06 24.905 39542000 0 0 0 0 2943100 0 2381700 3117500 0 0 6855200 6233500 4574800 4127800 9308700 25961 2753 23675 218913;218914;218915;218916;218917;218918;218919;218920 174903;174904;174905;174906;174907;174908 174905 6 IVQLLGQNEVDYR Unmodified 1545.8151 0.81510635 4277 Q9BZX2 UCK2 Uridine-cytidine kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 2 2 1 1 2 1 1 2 2 2 1 1 73.189 73.225 2;3 4.8885E-20 84427 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 156.48 99.751 1362900000 0 0 0 71510000 81081000 138530000 72663000 110270000 81940000 128110000 151210000 159880000 112190000 106850000 148700000 25962 4277 23676 218921;218922;218923;218924;218925;218926;218927;218928;218929;218930;218931;218932;218933;218934;218935;218936;218937;218938 174909;174910;174911;174912;174913;174914;174915;174916;174917;174918;174919;174920;174921;174922;174923;174924;174925;174926 174925 18 IVQLLGQNEVDYRQK Unmodified 1801.9686 0.96864688 4277 Q9BZX2 UCK2 Uridine-cytidine kinase 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 2 16 1 1 1 1 1 2 2 2 1 1 2 1 1 1 63.803 63.193 2;3 4.079E-40 85395 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 142.85 105.84 506690000 116790000 0 11672000 19623000 14724000 18751000 32864000 45467000 33655000 36412000 38344000 43367000 23229000 23311000 48480000 25963 4277 23677 218939;218940;218941;218942;218943;218944;218945;218946;218947;218948;218949;218950;218951;218952;218953;218954;218955;218956 174927;174928;174929;174930;174931;174932;174933;174934;174935;174936;174937;174938;174939;174940;174941 174933 13 IVQMTEAEVR Unmodified 1174.6016 0.6016081 1873 P62140 PPP1CB Serine/threonine-protein phosphatase PP1-beta catalytic subunit yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 43.2 43.26 2 0.002198 48407 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 85.676 32.96 200140000 0 0 0 13933000 12455000 16362000 14938000 21118000 14139000 18862000 35871000 0 22514000 29948000 0 25964 1873 23678 218957;218958;218959;218960;218961;218962;218963;218964;218965;218966;218967 174942;174943;174944;174945;174946;174947 174943 6 IVQMTEAEVR Oxidation (M) 1190.5965 0.59652272 1873 P62140 PPP1CB Serine/threonine-protein phosphatase PP1-beta catalytic subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 24.242 23.962 2 0.001008 24671 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 105.52 90.26 69436000 0 11307000 0 4896100 3191700 0 0 4441400 3110600 6261300 8785700 10741000 0 0 16701000 25965 1873 23678 218968;218969;218970;218971;218972;218973;218974;218975;218976 174948;174949;174950;174951;174952;174953;174954;174955;174956 174954 3030 7 IVQMTEAEVRGLCIK Oxidation (M) 1761.9117 0.91172562 1873 P62140 PPP1CB Serine/threonine-protein phosphatase PP1-beta catalytic subunit yes yes 0 1 1 By MS/MS 2 0 1 1 63.394 59.635 3 0.001468 74207 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 60.196 49.711 10030000 0 0 10030000 0 0 0 0 0 0 0 0 0 0 0 0 25966 1873 23679 218977 174957 174957 3030 0 IVQPMIDQSNR Oxidation (M) 1315.6554 0.65543458 24 A6NDR6;Q99687;O00470;O14770 MEIS3P1;MEIS3;MEIS1;MEIS2 Putative homeobox protein Meis3-like 1;Homeobox protein Meis3;Homeobox protein Meis1;Homeobox protein Meis2 yes no 0 1 0 By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 35.9 36.12 2 0.01404 39964 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 42.348 22.562 14952000 0 0 0 1791300 0 0 0 2209800 1222800 2670500 1974000 3324500 1759300 0 0 25967 24 23680 218978;218979;218980;218981;218982;218983;218984;218985 174958;174959 174959 24 2 IVQTYHVNMAGTNPYTTITPQEINGK Unmodified 2889.4331 0.43309279 971 P12814 ACTN1 Alpha-actinin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.75 3.85 4 1 7 2 2 1 1 1 1 1 1 1 1 78.134 76.547 3 3.0683E-76 88398 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 123.54 113 578680000 312770000 183310000 24839000 0 0 0 0 2336200 3581100 4951700 5464700 4300700 0 5360100 31768000 25968 971 23681 218986;218987;218988;218989;218990;218991;218992;218993;218994;218995;218996;218997 174960;174961;174962;174963;174964;174965;174966;174967;174968 174962 9 IVQTYHVNMAGTNPYTTITPQEINGK Oxidation (M) 2905.428 0.42800742 971 P12814 ACTN1 Alpha-actinin-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.33 3.77 3 6 1 1 1 1 1 1 1 1 1 72.895 71.305 3 1.3145E-67 89781 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 132.84 125.97 257490000 99836000 80253000 14405000 0 0 0 3052700 4465900 3095700 0 17056000 11885000 0 0 23439000 25969 971 23681 218998;218999;219000;219001;219002;219003;219004;219005;219006 174969;174970;174971;174972;174973 174969 1283 5 IVRASNGDAWVEAHGK Unmodified 1708.8645 0.86451616 1399 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 0 1 By MS/MS 2 0 2 2 42.782 36.047 3;4 3.4861E-05 49505 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.346 71.371 224680000 224680000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25970 1399 23682 219007;219008 174974;174975;174976 174976 3 IVRDYDVYAR Unmodified 1268.6513 0.65133548 1577 P49585 PCYT1A Choline-phosphate cytidylyltransferase A no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.983 38.164 3 0.0012974 41577 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 97.163 75.117 286190000 0 0 0 11156000 15770000 19147000 16313000 28481000 14345000 20372000 29391000 67384000 16109000 15938000 31780000 25971 1577 23683 219009;219010;219011;219012;219013;219014;219015;219016;219017;219018;219019;219020 174977;174978;174979;174980;174981;174982;174983;174984;174985;174986 174984 10 IVRGDQPAASGDSDDDEPPPLPR Unmodified 2403.1302 0.13024549 135 O00264 PGRMC1 Membrane-associated progesterone receptor component 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 49.88 49.975 3 2.5137E-34 56979 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 84.573 76.351 63552000 0 0 0 6827300 9721900 8565600 0 0 0 0 0 15433000 0 9770900 13233000 25972 135 23684 219021;219022;219023;219024;219025;219026;219027 174987;174988;174989;174990;174991;174992;174993;174994;174995 174995 9 IVSAGEQQSPQPVSSALSWPITGGR Unmodified 2551.3031 0.3030649 2517 Q15334 LLGL1 Lethal(2) giant larvae protein homolog 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 84.901 85.042 3 0.0011333 98513 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 28.665 24.861 8983100 0 0 0 0 0 0 0 0 0 4257200 0 0 0 0 4725900 25973 2517 23685 219028;219029 174996 174996 1 IVSDYQRDPAITSILEK Unmodified 1947.0313 0.031306714 4921 Q9UI42 CPA4 Carboxypeptidase A4 yes yes 0 0 1 By MS/MS By matching By matching 10 0 3 1 1 1 76.594 76.38 3 0.006745 88516 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 46.249 46.249 42546000 0 0 0 20541000 4957700 0 0 17048000 0 0 0 0 0 0 0 25974 4921 23686 219030;219031;219032 174997 174997 0 IVSGIITPIHEQWEK Unmodified 1748.9461 0.94612052 3614 Q92530 PSMF1 Proteasome inhibitor PI31 subunit yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 75.286 75.393 3 9.9501E-07 86973 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 71.279 58.108 100840000 0 0 0 0 1688600 9647900 0 5566800 4279500 8805300 8484200 9019000 3124200 6407100 43817000 25975 3614 23687 219033;219034;219035;219036;219037;219038;219039;219040;219041;219042 174998;174999;175000;175001;175002;175003;175004;175005;175006;175007;175008;175009;175010 174999 13 IVSGNLRILDH Unmodified 1235.6986 0.69862003 2638 Q16851 UGP2 UTP--glucose-1-phosphate uridylyltransferase yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 70.572 63.113 3 0.02134 82820 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.971 30.604 240670000 165840000 74837000 0 0 0 0 0 0 0 0 0 0 0 0 0 25976 2638 23688 219043;219044;219045 175011;175012 175012 2 IVSGSPISTPSPSPLPR Unmodified 1690.9254 0.92538508 5000 Q9ULM3 YEATS2 YEATS domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.968 70.044 2 5.1364E-37 80408 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 134.18 103.31 142910000 0 0 0 9639100 11533000 12674000 7289500 7167800 5509900 18714000 19952000 27235000 7842300 7539100 7816200 25977 5000 23689 219046;219047;219048;219049;219050;219051;219052;219053;219054;219055;219056;219057 175013;175014;175015;175016;175017;175018;175019;175020;175021;175022;175023;175024;175025;175026 175024 14 IVSLPECFNSPYGAK Unmodified 1680.8181 0.81814282 4573 Q9NQR4 NIT2 Omega-amidase NIT2 yes yes 0 0 0 By MS/MS By MS/MS 5 3.56 1 1 1 2 1 81.298 77.28 2 0.00052082 95926 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.752 82.279 160880000 0 160880000 0 0 0 0 0 0 0 0 0 0 0 0 0 25978 4573 23690 219058;219059;219060 175027;175028;175029;175030 175027 4 IVSNGDEQLEK Unmodified 1230.6092 0.6091959 2752 Q5R372 RABGAP1L Rab GTPase-activating protein 1-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 23.338 23.619 2 0.0020981 23403 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 69.276 36.955 28757000 0 0 0 0 0 3935000 3406700 0 1815500 0 3109400 0 5470700 4650800 6368500 25979 2752 23691 219061;219062;219063;219064;219065;219066;219067;219068 175031;175032;175033;175034;175035;175036;175037 175036 7 IVSNWDRYQDIEK Unmodified 1664.8158 0.81583463 4574 Q9NQS1 AVEN Cell death regulator Aven yes yes 0 0 1 By MS/MS 2 0 1 1 66.262 57.967 3 0.0047905 77818 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.189 26.456 56231000 56231000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25980 4574 23692 219069 175038 175038 1 IVSQPQPAR Unmodified 994.55598 0.55597854 3255 Q8IX12 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.357 16.537 2 0.0021269 16522 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 128.57 87.064 953480000 0 0 0 48096000 45289000 58386000 65798000 74713000 54675000 76633000 94037000 129050000 64207000 92430000 150160000 25981 3255 23693 219070;219071;219072;219073;219074;219075;219076;219077;219078;219079;219080;219081 175039;175040;175041;175042;175043;175044;175045;175046;175047;175048;175049 175039 9 IVSQPQPARR Unmodified 1150.6571 0.65708956 3255 Q8IX12 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.271 12.42 3 0.038066 10872 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.423 30.199 34510000 0 0 0 1784400 2711700 1731000 3535700 3222000 2292800 3303700 2528700 3755500 2374000 2676800 4593800 25982 3255 23694 219082;219083;219084;219085;219086;219087;219088;219089;219090;219091;219092;219093 175050;175051 175051 1 IVSRPEELREDDVGTGAGLLEIK Unmodified 2495.3231 0.32313164 1570 P49368 CCT3 T-complex protein 1 subunit gamma yes yes 0 0 2 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 2 75.656 75.854 3;4 2.9929E-54 86958 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 114.63 92.643 274410000 0 0 0 0 0 7387100 0 17301000 19666000 0 6415100 0 0 0 223640000 25983 1570 23695 219094;219095;219096;219097;219098;219099 175052;175053;175054;175055;175056;175057;175058 175053 7 IVSSIFR Unmodified 820.48069 0.48068833 4308 Q9GZU8 FAM192A Protein FAM192A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 53.833 53.971 2 0.015564 60755 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 117.7 42.867 318780000 0 0 0 15733000 14871000 19899000 21477000 17640000 16238000 27175000 42232000 33823000 23536000 29385000 56777000 25984 4308 23696 219100;219101;219102;219103;219104;219105;219106;219107;219108;219109;219110;219111 175059;175060;175061;175062;175063;175064;175065;175066;175067;175068 175064 10 IVSSLDLYK Unmodified 1036.5805 0.58046195 4770 Q9NZJ4 SACS Sacsin yes yes 0 0 0 By MS/MS 2 0 1 1 68.583 62.684 2 0.05336 80029 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.877 13.273 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25985 4770 23697 219112 175069 175069 1 IVSSSDVGHDEYSTQSLVK Unmodified 2049.9855 0.98547873 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 57.673 51.976 3 6.7983E-10 67101 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.32 80.179 1542100000 33975000 1496100000 11968000 0 0 0 0 0 0 0 0 0 0 0 0 25986 2047 23698 219113;219114;219115;219116 175070;175071;175072;175073;175074;175075;175076;175077 175071 8 IVSVGDDQEIHIYDCPI Unmodified 1971.9248 0.92479273 4304 Q9GZS3 WDR61 WD repeat-containing protein 61;WD repeat-containing protein 61, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.3 3.85 5 1 4 1 4 1 1 1 1 1 84.933 82.129 2 4.4188E-35 101591 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.37 123.83 905450000 67407000 804900000 19023000 0 1177100 0 0 0 0 5637000 4064200 3248700 0 0 0 25987 4304 23699 219117;219118;219119;219120;219121;219122;219123;219124;219125;219126 175078;175079;175080;175081;175082;175083;175084;175085 175079 8 IVSVHLQDSTLK Unmodified 1338.7507 0.75071518 1635 P50747 HLCS Biotin--protein ligase;Biotin--[methylmalonyl-CoA-carboxytransferase] ligase;Biotin--[propionyl-CoA-carboxylase [ATP-hydrolyzing]] ligase;Biotin--[methylcrotonoyl-CoA-carboxylase] ligase;Biotin--[acetyl-CoA-carboxylase] ligase yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 60.778 54.731 2 0.018591 74132 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.485 53.547 13758000 10012000 0 3745900 0 0 0 0 0 0 0 0 0 0 0 0 25988 1635 23700 219127;219128 175086 175086 1 IVSWLEMEYGLSEK Oxidation (M) 1698.8175 0.81747411 2294 Q13451 FKBP5 Peptidyl-prolyl cis-trans isomerase FKBP5;Peptidyl-prolyl cis-trans isomerase FKBP5, N-terminally processed yes yes 0 1 0 By MS/MS By matching By MS/MS 2 0 3 1 1 1 87.756 82.621 2 0.0032266 105002 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.121 42.341 17848000 4839700 12116000 891780 0 0 0 0 0 0 0 0 0 0 0 0 25989 2294 23701 219129;219130;219131 175087;175088 175087 3755 2 IVSWLEYESSFSNEEAQK Unmodified 2144.9902 0.99022976 2080 Q02790 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 6 2 2 4 2 89.242 84.574 2;3 3.9113E-81 106098 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 238.13 231.25 839750000 200640000 603020000 36083000 0 0 0 0 0 0 0 0 0 0 0 0 25990 2080 23702 219132;219133;219134;219135;219136;219137;219138;219139 175089;175090;175091;175092;175093;175094;175095 175089 6 IVTAQENGK Unmodified 958.50836 0.50835964 2734 Q5JSH3 WDR44 WD repeat-containing protein 44 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 8.9704 5.8848 2 0.0081026 10174 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 91.069 36.519 131830000 23946000 103420000 4459800 0 0 0 0 0 0 0 0 0 0 0 0 25991 2734 23703 219140;219141;219142 175096;175097 175097 2 IVTDRETGSSK Unmodified 1191.6095 0.60953025 1085 P19338 NCL Nucleolin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.58 3.03 5 1 27 1 3 2 2 3 3 3 2 2 1 3 2 2 2 2 7.0609 6.608 2;3 1.5125E-88 4393 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 208.84 167.42 1369100000 16825000 127920000 96630000 84847000 63906000 63346000 92402000 86543000 26649000 20482000 183350000 93224000 127260000 100970000 184730000 25992 1085 23704 219143;219144;219145;219146;219147;219148;219149;219150;219151;219152;219153;219154;219155;219156;219157;219158;219159;219160;219161;219162;219163;219164;219165;219166;219167;219168;219169;219170;219171;219172;219173;219174;219175 175098;175099;175100;175101;175102;175103;175104;175105;175106;175107;175108;175109;175110;175111;175112 175102 10 IVTGGSDNHLILVDLR Unmodified 1720.9472 0.94718315 1335 P34896 SHMT1 Serine hydroxymethyltransferase, cytosolic yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 78.323 78.504 3 0.0019982 90231 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.618 41.069 15822000 0 0 0 0 0 0 0 0 0 0 0 0 0 3484900 12337000 25993 1335 23705 219176;219177 175113 175113 1 IVTGLSESSVK Unmodified 1118.6183 0.61830402 3220 Q8IUR7 ARMC8 Armadillo repeat-containing protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.557 41.735 2 0.0025968 46366 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 66.962 36.458 53698000 0 0 0 2653100 3319300 4716400 3065100 4259800 2738200 4835000 5827700 4748500 5679200 4493000 7362900 25994 3220 23706 219178;219179;219180;219181;219182;219183;219184;219185;219186;219187;219188;219189 175114;175115;175116;175117;175118;175119;175120;175121;175122;175123 175115 10 IVTIEANK Unmodified 886.51238 0.51238239 564 O75943 RAD17 Cell cycle checkpoint protein RAD17 yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 28.632 28.913 2 0.031953 30551 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 54.611 13.384 54205000 0 0 0 0 2644800 0 0 4872700 0 9343500 0 12408000 6342800 8113600 10480000 25995 564 23707 219190;219191;219192;219193;219194;219195;219196 175124 175124 1 IVTISDPNNAGCSATMVAVPAGADPSTVAK Unmodified 2913.4212 0.42120748 2852 Q68CP9 ARID2 AT-rich interactive domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 79.264 79.264 3 3.7392E-15 90822 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 50.499 47.619 26577000 0 0 0 0 4090700 0 0 0 0 7982500 0 0 7309500 7194800 0 25996 2852 23708 219197;219198;219199;219200 175125;175126;175127 175126 3 IVTISDPNNAGCSATMVAVPAGADPSTVAK Oxidation (M) 2929.4161 0.4161221 2852 Q68CP9 ARID2 AT-rich interactive domain-containing protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 75.28 75.434 3 7.1624E-12 87096 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 43.622 36.823 36531000 0 0 0 0 0 0 0 0 0 12085000 0 14921000 0 9525500 0 25997 2852 23708 219201;219202;219203 175128 175128 4506 1 IVTLEEEPIK Unmodified 1169.6544 0.65435518 4584 Q9NR09 BIRC6 Baculoviral IAP repeat-containing protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 60.076 60.322 2 0.0081131 68715 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 60.828 31.911 91841000 0 0 0 0 0 9469900 6439300 6878100 5513600 8704100 10620000 10508000 8839800 9243000 15625000 25998 4584 23709 219204;219205;219206;219207;219208;219209;219210;219211;219212;219213 175129;175130;175131;175132;175133;175134 175130 6 IVTLTPFCTIANK Unmodified 1476.801 0.80103619 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 82.619 82.663 2 0.00082789 95784 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.781 57.891 34351000 0 0 0 1658000 1546300 2270500 2272200 2905400 2624400 2463600 4426500 7702600 6481300 0 0 25999 3023 23710 219214;219215;219216;219217;219218;219219;219220;219221;219222;219223 175135;175136;175137;175138;175139;175140 175139 5 IVTMDSNFVPVNDK Unmodified 1577.7759 0.77594365 36 A8K2U0 A2ML1 Alpha-2-macroglobulin-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 72.729 72.744 2 1.9537E-17 83763 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 124.42 72.496 77603000 0 0 0 29769000 5430100 0 3297300 8343600 0 9852200 8615600 7663100 4632000 0 0 26000 36 23711 219224;219225;219226;219227;219228;219229;219230;219231 175141;175142;175143;175144;175145;175146;175147;175148;175149;175150 175141 10 IVTMDSNFVPVNDK Oxidation (M) 1593.7709 0.77085827 36 A8K2U0 A2ML1 Alpha-2-macroglobulin-like protein 1 yes yes 0 1 0 By MS/MS By matching 10 0 2 1 1 58.119 57.857 2 0.00010995 66644 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 81.92 62.788 22693000 0 0 0 17313000 0 0 0 0 0 5379900 0 0 0 0 0 26001 36 23711 219232;219233 175151 175151 34 1 IVTNNLK Unmodified 800.4756 0.47560295 853 P07951 TPM2 Tropomyosin beta chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 22.314 18.426 2 0.016439 24211 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.01 59.35 963660000 102630000 842470000 18567000 0 0 0 0 0 0 0 0 0 0 0 0 26002 853 23712 219234;219235;219236;219237 175152;175153;175154;175155 175152 3 IVTSSETVVK Unmodified 1061.5968 0.5968403 4580 Q9NQX4 MYO5C Unconventional myosin-Vc yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.622 29.814 2 0.019051 31087 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.036 17.532 60556000 0 0 0 3708600 4456200 4570500 4280700 4762400 4139000 5772000 5084700 6555000 5483100 5064600 6679700 26003 4580 23713 219238;219239;219240;219241;219242;219243;219244;219245;219246;219247;219248;219249 175156;175157;175158;175159 175157 4 IVTTYIR Unmodified 864.5069 0.50690308 1630 P50570 DNM2 Dynamin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.994 42.171 2 0.015564 47007 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 117.7 63.174 848170000 0 0 0 44044000 43065000 62157000 60655000 50289000 42938000 97511000 89932000 94715000 68670000 70394000 123800000 26004 1630 23714 219250;219251;219252;219253;219254;219255;219256;219257;219258;219259;219260;219261 175160;175161;175162;175163;175164;175165;175166;175167;175168;175169;175170 175164 11 IVTVLPGLPTSPDSASSACGNSSATKPDK Unmodified 2856.4175 0.41750231 3112 Q7Z6J0 SH3RF1 E3 ubiquitin-protein ligase SH3RF1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 77.373 77.419 3 3.2085E-61 89451 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 108.57 102.2 127480000 0 0 0 7386500 10238000 12674000 10281000 13506000 8949800 15474000 12128000 0 9129600 9384400 18329000 26005 3112 23715 219262;219263;219264;219265;219266;219267;219268;219269;219270;219271;219272 175171;175172;175173;175174;175175;175176;175177;175178;175179;175180;175181;175182;175183;175184 175178 14 IVTVVPQDTK Unmodified 1098.6285 0.62847478 624 O95163 IKBKAP Elongator complex protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 42 42.177 2 0.00067415 45712 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 121.73 69.478 384160000 0 0 0 16787000 20387000 34617000 24293000 27212000 19164000 40124000 35017000 43816000 32942000 34102000 55701000 26006 624 23716 219273;219274;219275;219276;219277;219278;219279;219280;219281;219282;219283;219284;219285 175185;175186;175187;175188;175189;175190;175191;175192;175193;175194;175195;175196;175197 175189 13 IVVAMAK Oxidation (M) 746.43605 0.43604632 1267 P30084 ECHS1 Enoyl-CoA hydratase, mitochondrial yes yes 0 1 0 By MS/MS 2 0 1 1 21.155 17.441 1 0.015406 22973 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.906 44.214 4969600 0 4969600 0 0 0 0 0 0 0 0 0 0 0 0 0 26007 1267 23717 219286 175198 175198 1868 0 IVVDELSNLK Unmodified 1128.639 0.63903946 114 L0R819 ASNSD1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 70.895 70.567 2 0.0061036 81010 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 66.27 34.336 54635000 0 10302000 0 2809700 3567800 3412900 3824400 3885600 2972300 5025400 6852400 0 4463200 7518600 0 26008 114 23718 219287;219288;219289;219290;219291;219292;219293;219294;219295;219296;219297;219298;219299 175199;175200;175201;175202;175203;175204;175205;175206;175207 175202 9 IVVDSESR Unmodified 903.46616 0.46616048 2786 Q5T8P6 RBM26 RNA-binding protein 26 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.251 18.439 2 0.018283 19053 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 64.567 11.931 120800000 0 0 0 7878900 12779000 9330600 8859800 6848400 7595600 10895000 7729200 19283000 10727000 8468900 10407000 26009 2786 23719 219300;219301;219302;219303;219304;219305;219306;219307;219308;219309;219310;219311 175208;175209;175210 175208 3 IVVDSESRK Unmodified 1031.5611 0.56112349 2786 Q5T8P6 RBM26 RNA-binding protein 26 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 11.473 11.62 2 0.014242 9759 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 106.36 52.802 176160000 0 0 0 14913000 13404000 12364000 17077000 11731000 13872000 17517000 11641000 16941000 14510000 15554000 16633000 26010 2786 23720 219312;219313;219314;219315;219316;219317;219318;219319;219320;219321;219322;219323 175211;175212;175213;175214;175215;175216;175217;175218 175214 1 IVVEAPAK Unmodified 825.496 0.49600404 5241 Q9Y5N6 ORC6 Origin recognition complex subunit 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.65 31.837 2 0.030197 35280 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 55.676 29.849 1305100000 0 0 0 80589000 82693000 96766000 100820000 88676000 71184000 109570000 148590000 224060000 106850000 79909000 115390000 26011 5241 23721 219324;219325;219326;219327;219328;219329;219330;219331;219332;219333;219334;219335 175219;175220;175221 175221 3 IVVEEGGYEAICK Unmodified 1465.7123 0.71228076 1436 P41229 KDM5C Lysine-specific demethylase 5C yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 63.041 57.148 2 8.6011E-06 73234 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.92 71.177 30380000 0 30380000 0 0 0 0 0 0 0 0 0 0 0 0 0 26012 1436 23722 219336;219337 175222;175223 175222 2 IVVEFLQSNSDSTYEDLINK Unmodified 2313.1376 0.13762228 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 0 0 By MS/MS 2 0 2 2 93.231 85.1 2;3 2.2629E-12 110235 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 123.02 111.75 37514000 37514000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26013 1201 23723 219338;219339 175224;175225 175225 2 IVVEMIK Oxidation (M) 846.48848 0.48847582 4491 Q9HAV4 XPO5 Exportin-5 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 39.967 40.16 2 0.049603 43322 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.358 23.532 66072000 0 0 0 4642900 3954200 10959000 0 0 4585100 8824800 6607500 7037200 6008300 5019400 8433800 26014 4491 23724 219340;219341;219342;219343;219344;219345;219346;219347;219348;219349 175226 175226 1 IVVFQYSDGK Unmodified 1154.5972 0.59717465 2608 Q16531 DDB1 DNA damage-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.838 61.937 2 0.0024367 70229 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 83.623 51.496 325120000 0 0 0 15742000 18239000 17049000 18002000 11961000 13872000 20410000 37458000 49301000 20339000 27995000 74753000 26015 2608 23725 219350;219351;219352;219353;219354;219355;219356;219357;219358;219359;219360;219361 175227;175228;175229;175230;175231;175232;175233;175234;175235;175236;175237;175238 175236 11 IVVHLHPAPPNK Unmodified 1320.7666 0.76664001 3168 Q86VN1 VPS36 Vacuolar protein-sorting-associated protein 36 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS 10 0 4 1 1 1 1 37.503 37.773 3 0.0023719 42125 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 55.718 36.475 18029000 0 0 0 0 0 5156900 0 2642700 0 3477600 0 0 0 0 6751700 26016 3168 23726 219362;219363;219364;219365 175239;175240 175239 2 IVVIAPGR Unmodified 823.52797 0.52797287 4763 Q9NZC9 SMARCAL1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 46.604 46.893 2 0.017432 53060 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 65.672 37.418 17519000 0 0 0 0 0 2981100 2583100 0 2197300 0 2188100 0 2562900 1626900 3380100 26017 4763 23727 219366;219367;219368;219369;219370;219371;219372 175241 175241 1 IVVLFYK Unmodified 880.54223 0.54222595 5280;3043 Q9Y6E2;Q7L1Q6 BZW2;BZW1 Basic leucine zipper and W2 domain-containing protein 2;Basic leucine zipper and W2 domain-containing protein 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.53 2.94 1 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 78.316 77.356 2 0.023328 89419 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 91.093 72.288 1560900000 23525000 5838500 0 62964000 72536000 130990000 94144000 114040000 102790000 158060000 109580000 158010000 96004000 119000000 313380000 26018 5280;3043 23728 219373;219374;219375;219376;219377;219378;219379;219380;219381;219382;219383;219384;219385;219386;219387 175242;175243;175244;175245;175246;175247;175248;175249;175250;175251;175252;175253;175254;175255;175256 175252 15 IVVLGDGASGK Unmodified 1014.571 0.5709599 1650 P51157 RAB28 Ras-related protein Rab-28 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 44.696 40.15 2 0.033664 52345 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.414 25.69 38927000 0 37607000 1320200 0 0 0 0 0 0 0 0 0 0 0 0 26019 1650 23729 219388;219389 175257 175257 0 IVVLLQR Unmodified 839.55927 0.559273 2127 Q06323 PSME1 Proteasome activator complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.922 61.026 2 0.038607 69786 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 114.67 64.548 305210000 0 0 0 17703000 12122000 26785000 19351000 17012000 10092000 27252000 29459000 36840000 15986000 22024000 70590000 26020 2127 23730 219390;219391;219392;219393;219394;219395;219396;219397;219398;219399;219400;219401 175258 175258 0 IVVMPIAR Unmodified 897.54699 0.54699375 3547 Q8WUI4 HDAC7 Histone deacetylase 7 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 63.91 64.068 2 0.020219 73297 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 62.978 42.497 6244800 0 0 0 0 0 0 3350200 2894500 0 0 0 0 0 0 0 26021 3547 23731 219402;219403 175259 175259 1 IVVNLTGR Unmodified 870.5287 0.52870115 1878 P62244 RPS15A 40S ribosomal protein S15a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 50.668 50.821 2 0.0047287 57253 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 113.5 52.711 525170000 0 0 0 25767000 32244000 25696000 29510000 39818000 27331000 40143000 67065000 56200000 51847000 52728000 76821000 26022 1878 23732 219404;219405;219406;219407;219408;219409;219410;219411;219412;219413;219414;219415 175260;175261;175262;175263;175264;175265;175266;175267;175268;175269;175270;175271;175272;175273;175274;175275 175261 16 IVVPPLPGK Unmodified 918.59024 0.59023878 5022 Q9UMY4 SNX12 Sorting nexin-12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.781 68.861 2 0.025695 78649 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 50.127 34.495 244280000 0 0 0 11518000 9936600 27705000 17832000 11101000 9225100 32317000 29954000 21513000 14965000 20047000 38162000 26023 5022 23733 219416;219417;219418;219419;219420;219421;219422;219423;219424;219425;219426;219427 175276;175277;175278;175279;175280 175280 4 IVVSNTPR Unmodified 884.50797 0.50796571 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.737 22.942 2 0.0081134 23393 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 87.323 20.329 345770000 0 0 0 14251000 17866000 25135000 16411000 25013000 12715000 37976000 36977000 43440000 31573000 36728000 47685000 26024 3641 23734 219428;219429;219430;219431;219432;219433;219434;219435;219436;219437;219438;219439 175281;175282;175283;175284;175285;175286;175287;175288;175289;175290;175291 175290 10 IVVVDEADTMLK Oxidation (M) 1347.6956 0.69556806 2769 Q5T1V6 DDX59 Probable ATP-dependent RNA helicase DDX59 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.7 3.52 2 1 7 1 2 1 1 1 1 1 1 1 62.685 61.346 2 0.0073773 70498 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 45.598 32.621 45789000 0 28244000 0 2171000 0 3942500 2967100 2309800 0 3099800 0 0 3055300 0 0 26025 2769 23735 219440;219441;219442;219443;219444;219445;219446;219447;219448;219449 175292;175293;175294;175295;175296;175297;175298 175293 4401 7 IVVVTAGVR Unmodified 912.57565 0.57565135 836 P07195 LDHB L-lactate dehydrogenase B chain yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 2 1 1 1 47.999 48.162 2 0.0029277 53359 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 125.25 60.449 1266500000 0 0 0 8251300 9331200 19420000 14715000 12106000 8390600 20350000 198410000 164040000 22016000 134140000 655290000 26026 836 23736 219450;219451;219452;219453;219454;219455;219456;219457;219458;219459;219460;219461;219462 175299;175300;175301;175302;175303;175304;175305;175306;175307;175308;175309;175310;175311 175307 13 IVWLQEK Unmodified 914.52255 0.52255314 1704 P52888 THOP1 Thimet oligopeptidase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 61.388 60.029 2 0.027727 82092 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.068 65.764 81750000 13776000 0 3945900 3010300 0 0 0 0 1563300 0 14803000 8631600 0 7920000 28100000 26027 1704 23737 219463;219464;219465;219466;219467;219468;219469;219470 175312;175313;175314;175315;175316;175317 175314 6 IVYGHLDDPASQEIERGK Unmodified 2026.012 0.011968255 4061 Q99798 ACO2 Aconitate hydratase, mitochondrial yes yes 0 0 1 By matching By MS/MS 2 0 3 1 2 59.157 53.854 3;4 0.00073948 67256 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 58.246 49.537 48950000 5717500 0 43232000 0 0 0 0 0 0 0 0 0 0 0 0 26028 4061 23738 219471;219472;219473 175318;175319 175319 1 IVYLYTK Unmodified 898.51641 0.51640513 1562 P49207 RPL34 60S ribosomal protein L34 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 2 1 2 49.745 49.956 2 0.023501 56665 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 84.699 53.641 444930000 0 0 0 19775000 25072000 26940000 25645000 0 17769000 24781000 37882000 75520000 71186000 28646000 91711000 26029 1562 23739 219474;219475;219476;219477;219478;219479;219480;219481;219482;219483;219484;219485;219486 175320;175321;175322;175323;175324;175325;175326;175327 175320 8 IVYPTEK Unmodified 848.46437 0.46436956 2452 Q14847 LASP1 LIM and SH3 domain protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 30.258 29.16 2 0.022033 37746 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.24 76.124 4325100000 64118000 3851300000 46885000 10773000 6581000 9988600 10160000 0 7199000 9576200 38762000 67065000 12987000 52666000 137020000 26030 2452 23740 219487;219488;219489;219490;219491;219492;219493;219494;219495;219496;219497;219498;219499;219500;219501 175328;175329;175330;175331;175332;175333;175334;175335;175336;175337;175338;175339;175340;175341 175331 14 IVYVEEK Unmodified 878.47493 0.47493425 1146 P22735 TGM1 Protein-glutamine gamma-glutamyltransferase K yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 29.242 29.148 2 0.035807 31582 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 70.67 28.441 110360000 0 0 0 59158000 9567500 10409000 13539000 17687000 0 0 0 0 0 0 0 26031 1146 23741 219502;219503;219504;219505;219506 175342;175343 175342 2 IWADIPAPK Unmodified 1009.5597 0.55966693 1573 P49419 ALDH7A1 Alpha-aminoadipic semialdehyde dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 70.153 69.534 2 0.0072915 88069 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.114 76.129 1178100000 0 1087800000 32866000 4282400 1842500 3059500 0 3896100 0 3317000 7067000 7485000 3357600 6247800 16874000 26032 1573 23742 219507;219508;219509;219510;219511;219512;219513;219514;219515;219516;219517;219518 175344;175345;175346;175347;175348;175349 175344 6 IWALEEENAK Unmodified 1201.5979 0.59790293 399 O60437 PPL Periplakin yes yes 0 0 0 By MS/MS 10 0 1 1 60.258 59.572 2 0.0017004 68749 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 89.247 77.4 4778500 0 0 0 4778500 0 0 0 0 0 0 0 0 0 0 0 26033 399 23743 219519 175350;175351 175351 2 IWAPTAEASTELTGLK Unmodified 1686.8829 0.88285156 2791 Q5TAQ9 DCAF8 DDB1- and CUL4-associated factor 8 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 84.533 81.043 2 2.3296E-07 100772 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.1 90.437 482190000 0 477940000 4253100 0 0 0 0 0 0 0 0 0 0 0 0 26034 2791 23744 219520;219521;219522 175352;175353;175354 175352 3 IWCFGPDGTGPNILTDITK Unmodified 2104.0299 0.029926505 980 P13639 EEF2 Elongation factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.25 3.34 2 1 1 1 2 1 97.19 93.183 2 9.5347E-85 115746 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 197.19 189.06 202410000 39096000 162190000 0 0 0 0 0 0 0 0 0 0 0 0 1131700 26035 980 23745 219523;219524;219525;219526 175355;175356;175357;175358 175355 3 IWDISQPGSK Unmodified 1129.5768 0.57677356 2104 Q04726 TLE3 Transducin-like enhancer protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 58.755 55.833 2 0.00065942 71532 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.71 63.078 175830000 7360100 146350000 3494100 0 0 0 5367700 7172000 6079600 0 0 0 0 0 0 26036 2104 23746 219527;219528;219529;219530;219531;219532;219533;219534;219535;219536;219537 175359;175360;175361;175362;175363;175364;175365;175366;175367;175368 175362 10 IWDLADPEGK Unmodified 1142.5608 0.56078914 4836 Q9UBC2 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 69.811 70.045 2 0.0071865 79763 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.076 38.153 25903000 0 0 0 0 0 0 0 0 0 4132300 6427900 0 3032700 3983700 8326000 26037 4836 23747 219538;219539;219540;219541;219542;219543;219544 175369;175370;175371;175372;175373 175371 5 IWDLADTDGK Unmodified 1132.5401 0.5400537 1457 P42566 EPS15 Epidermal growth factor receptor substrate 15 yes yes 0 0 0 By MS/MS 2 0 1 1 67.51 61.594 2 0.020066 78634 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.711 39.713 34882000 0 34882000 0 0 0 0 0 0 0 0 0 0 0 0 0 26038 1457 23748 219545 175374 175374 1 IWDLEGK Unmodified 859.44397 0.44396847 1950 P63244 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 54.349 54.76 2 0.031632 61332 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 73.637 7.55 43870000 0 0 0 0 0 0 0 0 0 0 0 23790000 0 20080000 0 26039 1950 23749 219546;219547 175375 175375 1 IWDPTPSHTPAGAATPGR Unmodified 1830.9013 0.90129559 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 0 By MS/MS 10 0 1 1 49.565 50.275 3 4.2709E-05 55853 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.94 57.16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26040 516 23750 219548 175376 175376 1 IWDTASGQCLK Unmodified 1277.6074 0.60742176 1865 P61964 WDR5 WD repeat-containing protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 2 1 1 1 46.831 47.162 2 0.00053235 52069 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 96.331 84.484 28585000 0 0 0 0 2758400 0 0 0 0 0 3089100 8505700 4304200 4187400 5740200 26041 1865 23751 219549;219550;219551;219552;219553;219554;219555 175377;175378;175379;175380;175381;175382 175379 6 IWDVSSGK Unmodified 890.44978 0.44978213 1865 P61964 WDR5 WD repeat-containing protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 37.207 37.572 2 0.0076382 40478 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 88.954 17.576 225000000 0 0 0 0 0 15357000 0 18698000 0 27915000 28476000 36424000 25728000 22947000 49456000 26042 1865 23752 219556;219557;219558;219559;219560;219561;219562;219563;219564 175383;175384;175385;175386;175387;175388;175389 175387 7 IWDYQNK Unmodified 965.46068 0.46068117 1358 P35606 COPB2 Coatomer subunit beta' yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 36.38 36.612 2 0.027443 39240 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 77.496 58.136 68067000 0 0 0 0 0 0 0 0 8421600 16268000 0 0 23352000 20025000 0 26043 1358 23753 219565;219566;219567;219568 175390;175391 175391 2 IWEQIQPDLHTNDECVATYK Unmodified 2459.1427 0.14272443 2205 Q12904 AIMP1 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1;Endothelial monocyte-activating polypeptide 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.21 3.75 4 1 9 1 3 1 1 1 1 1 1 1 1 1 1 75.732 74.107 2;3 7.0908E-99 92296 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 190.86 179.42 457390000 21795000 304650000 33508000 0 3948100 5853800 0 4918900 8023400 12129000 12393000 11040000 0 10633000 28498000 26044 2205 23754 219569;219570;219571;219572;219573;219574;219575;219576;219577;219578;219579;219580;219581;219582 175392;175393;175394;175395;175396;175397;175398;175399;175400;175401;175402;175403;175404 175395 12 IWFSAQR Unmodified 906.47119 0.47118627 4979 Q9UKY1 ZHX1 Zinc fingers and homeoboxes protein 1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 56.344 56.552 2 0.026085 63389 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 79.454 56.434 86205000 0 0 0 0 4835500 8620000 0 6741500 7328600 10079000 7956700 8586600 10490000 7404900 14163000 26045 4979 23755 219583;219584;219585;219586;219587;219588;219589;219590;219591;219592 175405;175406;175407 175407 3 IWGAYDGK Unmodified 908.43922 0.43921744 1865 P61964 WDR5 WD repeat-containing protein 5 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 40.605 40.883 2 0.028474 44561 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 56.721 44.514 86713000 0 0 0 0 0 7470300 6297400 0 5073100 12419000 12860000 0 10033000 8936800 23623000 26046 1865 23756 219593;219594;219595;219596;219597;219598;219599;219600 175408;175409;175410 175409 3 IWGSAQGMDSMLK Unmodified 1422.6636 0.66355643 5078 Q9Y232 CDYL Chromodomain Y-like protein yes yes 0 0 0 By MS/MS 2 0 1 1 81.79 73.66 2 0.0020846 96499 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.456 78.353 10220000 10220000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26047 5078 23757 219601 175411 175411 1 IWHHTFYNELR Unmodified 1514.7419 0.74188183 1951;1815;1958 P60709;Q6S8J3;A5A3E0;P0CG38;Q9BYX7;P0CG39;P63261;P68032;P68133 ACTB;POTEE;POTEF;POTEI;POTEKP;POTEJ;ACTG1;ACTC1;ACTA1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;POTE ankyrin domain family member J;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha cardiac muscle 1;Actin, alpha skeletal muscle no no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 56 1 12 5 10 6 6 2 14 70.659 70.879 3 0.00016687 66968 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.313 77.634 368450000 0 0 0 1430000 0 109520000 0 13809000 45611000 0 0 30480000 20250000 3753000 143600000 26048 1815;1951;1958 23758 219602;219603;219604;219605;219606;219607;219608;219609;219610;219611;219612;219613;219614;219615;219616;219617;219618;219619;219620;219621;219622;219623;219624;219625;219626;219627;219628;219629;219630;219631;219632;219633;219634;219635;219636;219637;219638;219639;219640;219641;219642;219643;219644;219645;219646;219647;219648;219649;219650;219651;219652;219653;219654;219655;219656;219657 175412;175413;175414;175415;175416;175417;175418;175419;175420;175421;175422;175423;175424;175425;175426;175427;175428;175429;175430;175431;175432;175433;175434;175435;175436;175437;175438;175439;175440;175441 175428 26 IWIPEEPSQVPAALSPVW Unmodified 2018.0513 0.051313874 5276 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 100.54 95.823 2 0.030765 118517 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 50.354 36.926 28874000 0 28874000 0 0 0 0 0 0 0 0 0 0 0 0 0 26049 5276 23759 219658 175442;175443 175443 2 IWLVDSK Unmodified 859.48035 0.48035398 1534 P48163 ME1 NADP-dependent malic enzyme yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 70.513 63.445 2 0.035514 80936 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.244 33.207 161430000 119210000 42224000 0 0 0 0 0 0 0 0 0 0 0 0 0 26050 1534 23760 219659;219660 175444;175445 175444 2 IWNNVTR Unmodified 901.477 0.47699993 1210 P26640 VARS Valine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 31.716 32.226 2 0.048847 34265 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 64.803 28.618 18697000 0 0 0 0 0 0 0 0 0 0 0 0 0 6167500 12529000 26051 1210 23761 219661;219662 175446 175446 1 IWNPSPSLAAGK Unmodified 1239.6612 0.66117189 5370 yes yes 0 0 0 By MS/MS 10 0 1 1 16.53 17.043 3 0.039941 16628 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 30.889 15.746 + 6454300 0 0 0 0 0 0 0 0 0 0 0 6454300 0 0 0 26052 5370 23762 219663 175447 175447 1 IWPGYSELPAVK Unmodified 1358.7234 0.72343779 1118 P21127 CDK11B Cyclin-dependent kinase 11B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80.796 79.818 2 0.0037384 92289 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 72.643 43.17 147500000 23200000 70100000 3855600 1483300 1774900 3263700 2284000 4491600 3330500 5472300 5123900 6690000 3073500 2906900 10452000 26053 1118 23763 219664;219665;219666;219667;219668;219669;219670;219671;219672;219673;219674;219675;219676;219677;219678 175448;175449;175450;175451;175452;175453;175454;175455;175456;175457;175458;175459;175460;175461 175450 14 IWQDVQLK Unmodified 1028.5655 0.56548059 3892 Q96JG6 CCDC132 Coiled-coil domain-containing protein 132 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 58.249 58.439 2 0.016731 65587 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.799 31.907 42825000 0 0 0 0 2181800 4425900 3071800 4034500 0 5208500 4340600 4381700 4224600 3661600 7294200 26054 3892 23764 219679;219680;219681;219682;219683;219684;219685;219686;219687;219688 175462;175463;175464;175465;175466;175467;175468;175469;175470 175465 9 IWQGIDIETK Unmodified 1201.6343 0.63428844 3764 Q96BS2 TESC Calcineurin B homologous protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 6 4 2 2 1 1 1 1 73.712 71.955 2 0.013705 89784 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.17 53.933 77445000 0 67231000 1541100 0 0 0 0 0 0 0 2278400 0 0 0 6394800 26055 3764 23765 219689;219690;219691;219692 175471;175472 175471 2 IWQYVYSK Unmodified 1085.5546 0.55458155 1837;1444 P61163;P42025 ACTR1A;ACTR1B Alpha-centractin;Beta-centractin no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.294 59.403 2 0.0087284 68731 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 85.212 32.529 143250000 0 0 0 6888000 5824300 12814000 8015100 9327000 6902400 14025000 15732000 18692000 8714700 11748000 24565000 26056 1837;1444 23766 219693;219694;219695;219696;219697;219698;219699;219700;219701;219702;219703;219704 175473;175474;175475;175476;175477;175478;175479;175480;175481;175482;175483;175484;175485;175486 175485 13 IWSAEDASCVVTFK Unmodified 1611.7603 0.76029359 4111 Q9BRP4 PAAF1 Proteasomal ATPase-associated factor 1 yes yes 0 0 0 By MS/MS 2 0 1 1 83.446 78.726 2 0.0081201 97847 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.674 59.81 36264000 0 36264000 0 0 0 0 0 0 0 0 0 0 0 0 0 26057 4111 23767 219705 175487 175487 1 IWSVPNASCVQVVR Unmodified 1613.8348 0.83479593 5017 Q9UMS4 PRPF19 Pre-mRNA-processing factor 19 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 78.084 78.13 2 2.8017E-08 89405 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 118.4 91.074 234950000 0 0 0 9255200 8503600 22721000 9164400 14270000 15358000 20806000 0 39484000 23392000 22753000 49241000 26058 5017 23768 219706;219707;219708;219709;219710;219711;219712;219713;219714;219715;219716 175488;175489;175490;175491;175492;175493;175494;175495;175496;175497;175498;175499;175500 175495 12 IWTEDGNLASTLGQHK Unmodified 1768.8744 0.87441214 443 O60907 TBL1X F-box-like/WD repeat-containing protein TBL1X yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 68.026 68.174 3 0.0069748 77489 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.469 32.226 69025000 0 0 0 0 2654200 6196500 0 5786500 3127000 5112100 6782800 6905600 5641500 5963800 20855000 26059 443 23769 219717;219718;219719;219720;219721;219722;219723;219724;219725;219726 175501 175501 1 IWVNEETK Unmodified 1017.5131 0.51311067 3136 Q86TI2 DPP9 Dipeptidyl peptidase 9 yes yes 0 0 0 By MS/MS 2 0 2 2 38.107 35.609 2 0.01308 46273 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.299 43.75 185250000 0 185250000 0 0 0 0 0 0 0 0 0 0 0 0 0 26060 3136 23770 219727;219728 175502 175502 1 IYADPTK Unmodified 806.41742 0.41741937 5244 Q9Y5Q8 GTF3C5 General transcription factor 3C polypeptide 5 yes yes 0 0 0 By MS/MS 10 0 1 1 17.494 18.049 2 0.04888 17293 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.757 29.865 25195000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25195000 26061 5244 23771 219729 175503 175503 1 IYADTFGDINYQEFAK Unmodified 1893.8785 0.87849447 2481 Q15029 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 5.57 3.85 3 1 3 1 2 1 1 1 1 86.095 83.504 2 4.1334E-58 103741 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 207.47 199.06 534150000 18424000 480260000 13593000 0 0 0 0 0 0 5542900 4261100 0 0 0 12071000 26062 2481 23772 219730;219731;219732;219733;219734;219735;219736 175504;175505;175506;175507;175508;175509 175505 6 IYAGTGALEGK Unmodified 1078.5659 0.56587452 327 O43426 SYNJ1 Synaptojanin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 39.779 38.85 2 0.0011261 49264 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.584 32.379 84896000 0 52618000 0 0 3035000 3571400 0 0 0 4532800 4112300 0 4332500 5307700 7386800 26063 327 23773 219737;219738;219739;219740;219741;219742;219743;219744;219745 175510;175511;175512;175513 175512 4 IYAGTPR Unmodified 776.41809 0.41808807 533 O75694 NUP155 Nuclear pore complex protein Nup155 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 17.593 17.811 2 0.033465 17950 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 71.949 47.318 108150000 0 0 0 0 6470100 10472000 7773200 7855400 4076200 13144000 10217000 10892000 9738000 9754500 17753000 26064 533 23774 219746;219747;219748;219749;219750;219751;219752;219753;219754;219755;219756 175514;175515;175516 175515 3 IYALPDDLVEVKPK Unmodified 1598.892 0.89195969 2421 Q14651 PLS1 Plastin-1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 78.881 79.018 3 0.00081229 91230 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 46.318 24.651 45714000 0 0 0 0 0 6933100 0 3323000 0 4315600 4477800 6476600 2881800 5716700 11590000 26065 2421 23775 219757;219758;219759;219760;219761;219762;219763;219764 175517;175518;175519;175520;175521;175522 175517 6 IYAMGGGSYGK Unmodified 1102.5117 0.51173046 4362 Q9H2C0 GAN Gigaxonin yes yes 0 0 0 By MS/MS 2 0 1 1 42.141 37.045 2 0.043693 48221 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 56.916 24.981 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26066 4362 23776 219765 175523 175523 1 IYANFFPYGDASK Unmodified 1491.7034 0.70343063 1388 P37235;P84074 HPCAL1;HPCA Hippocalcin-like protein 1;Neuron-specific calcium-binding protein hippocalcin yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 81.175 80.147 2 0.00056132 92171 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 91.855 77.293 176030000 13498000 60397000 0 2776600 5149900 8612800 5360900 7787600 5814500 11416000 10876000 12846000 5188100 7868900 18436000 26067 1388 23777 219766;219767;219768;219769;219770;219771;219772;219773;219774;219775;219776;219777;219778;219779;219780 175524;175525;175526;175527;175528;175529;175530;175531;175532;175533;175534;175535;175536;175537;175538;175539 175535 16 IYAPEAPYTSHDK Unmodified 1490.7042 0.70415892 2647 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 41.444 41.625 3 0.00024402 46202 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 71.558 62.737 103400000 0 0 0 5593600 4779300 9435500 6936600 5626000 0 12506000 10511000 8540000 9255900 11818000 18395000 26068 2647 23778 219781;219782;219783;219784;219785;219786;219787;219788;219789;219790;219791 175540;175541;175542;175543;175544;175545;175546;175547;175548;175549;175550 175544 10 IYAVEASTMAQHAEVLVK Unmodified 1959.0135 0.013548159 3190 Q86X55 CARM1 Histone-arginine methyltransferase CARM1 yes yes 0 0 0 By MS/MS By matching 2.5 0.5 2 2 3 1 82.679 76.857 2;3 9.643E-05 78469 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 67.685 61.115 162890000 160750000 2143700 0 0 0 0 0 0 0 0 0 0 0 0 0 26069 3190 23779 219792;219793;219794;219795 175551;175552;175553 175551 3 IYCVACQELDSDVDK Unmodified 1813.7863 0.78625034 385 O60232 SSSCA1 Sjoegren syndrome/scleroderma autoantigen 1 yes yes 0 0 0 By MS/MS 2 0 1 1 66.683 60.766 2 8.7385E-08 77742 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.99 119.42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26070 385 23780 219796 175554 175554 1 IYDALDNR Unmodified 978.47706 0.47705951 2226 Q13042 CDC16 Cell division cycle protein 16 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.983 37.163 2 0.0075386 39666 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.296 73.856 250050000 0 0 0 15344000 15815000 18523000 14162000 14305000 14202000 25487000 19932000 32238000 23911000 20408000 35725000 26071 2226 23781 219797;219798;219799;219800;219801;219802;219803;219804;219805;219806;219807;219808 175555;175556;175557;175558;175559;175560;175561;175562;175563;175564;175565 175558 10 IYDALDNRTLATYSYK Unmodified 1905.9472 0.94724273 2226 Q13042 CDC16 Cell division cycle protein 16 homolog yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 75.331 71.51 3 0.00051649 89890 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.159 40.613 44776000 0 30531000 14245000 0 0 0 0 0 0 0 0 0 0 0 0 26072 2226 23782 219809;219810;219811 175566;175567;175568;175569;175570 175566 5 IYDALDVSLIERGESFYQDRMNDIVK Unmodified 3088.5176 0.5175507 1733 P54136 RARS Arginine--tRNA ligase, cytoplasmic yes yes 0 0 2 By MS/MS 2 0 1 1 97.315 89.185 4 0.013582 115181 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 23.566 17.405 18617000 18617000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26073 1733 23783 219812 175571 175571 1 IYDAQNELSAATHLTSK Unmodified 1860.9218 0.92175626 4965 Q9UKG1 APPL1 DCC-interacting protein 13-alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 68.187 68.351 3 9.2462E-10 78368 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 84.829 81.335 89391000 0 0 0 0 3098500 0 0 6697000 5417500 14990000 12846000 12126000 6240600 10705000 17271000 26074 4965 23784 219813;219814;219815;219816;219817;219818;219819;219820;219821 175572;175573;175574;175575;175576;175577;175578;175579 175572 8 IYDETQGR Unmodified 980.45632 0.45632407 28 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 13.222 13.351 2 0.040979 12242 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 50.127 13.106 25626000 0 0 0 1215700 1860900 3143400 2749900 0 1353400 3863700 3045600 3023100 2741100 2629000 0 26075 28 23785 219822;219823;219824;219825;219826;219827;219828;219829;219830;219831 175580 175580 1 IYDILSDNGPQQPSTTVK Unmodified 1974.9898 0.98983583 3976 Q96RT1 ERBB2IP Protein LAP2 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 76.792 71.954 2 3.1657E-05 82467 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 75.045 60.887 32377000 0 32377000 0 0 0 0 0 0 0 0 0 0 0 0 0 26076 3976 23786 219832;219833 175581;175582 175582 2 IYDLFQK Unmodified 925.49092 0.49091866 4763 Q9NZC9 SMARCAL1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 66.191 66.376 2 0.049926 76119 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 63.287 33.48 29238000 0 0 0 0 0 3979800 3597500 2533200 1994500 3389200 3647200 4691600 2395900 3009100 0 26077 4763 23787 219834;219835;219836;219837;219838;219839;219840;219841;219842 175583 175583 1 IYDLNKPEAEPK Unmodified 1415.7296 0.72964538 5167 Q9Y3F4 STRAP Serine-threonine kinase receptor-associated protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.08 1 1 22 2 2 2 2 1 1 2 2 2 2 2 2 2 38.159 37.916 2;3 8.1431E-05 41300 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.466 63.667 965010000 0 31914000 0 35048000 32286000 41577000 4260300 4601700 30941000 59931000 141490000 152410000 55907000 103020000 271620000 26078 5167 23788 219843;219844;219845;219846;219847;219848;219849;219850;219851;219852;219853;219854;219855;219856;219857;219858;219859;219860;219861;219862;219863;219864;219865;219866 175584;175585;175586;175587;175588;175589;175590;175591;175592;175593;175594;175595;175596;175597;175598;175599 175595 16 IYDPGGSVPSGEASAAFER Unmodified 1908.8854 0.88537076 2479 Q15025 TNIP1 TNFAIP3-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 66.868 67.213 2 0.00029587 77007 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 52.576 44.506 17646000 0 0 0 0 0 0 0 0 0 0 4115500 4036500 2678500 0 6816000 26079 2479 23789 219867;219868;219869;219870 175600;175601;175602 175602 3 IYDPQEGAVVVLPADSQQR Unmodified 2084.0538 0.05383307 4724 Q9NXF1 TEX10 Testis-expressed sequence 10 protein yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 2 2 1 2 2 1 1 2 2 2 75.677 75.706 2;3 2.2702E-06 86581 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 91.812 77.848 115270000 0 0 0 6150100 7071300 6584200 8830500 11147000 0 0 8169400 13497000 18509000 15969000 19341000 26080 4724 23790 219871;219872;219873;219874;219875;219876;219877;219878;219879;219880;219881;219882;219883;219884;219885;219886;219887 175603;175604;175605;175606;175607;175608;175609;175610;175611 175608 6 IYDREQTR Unmodified 1079.536 0.53597137 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 1 By matching By MS/MS By MS/MS 10 0 3 1 1 1 7.3106 7.2181 2 0.047356 5356 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 143.28 92.581 88062000 0 0 0 31716000 18093000 38253000 0 0 0 0 0 0 0 0 0 26081 1518 23791 219888;219889;219890 175612 175612 0 IYDREQTRYK Unmodified 1370.6943 0.69426293 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 2 By MS/MS 2 0 1 1 17.778 13.398 3 0.045193 19660 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.334 51.393 82926000 82926000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26082 1518 23792 219891 175613 175613 0 IYEDGDDDMK Oxidation (M) 1215.4601 0.4601484 4497 Q9HB71 CACYBP Calcyclin-binding protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 12.642 11.751 2 0.0012828 11338 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 87.476 84.797 375990000 79389000 110810000 3831000 6844700 6224600 24641000 13771000 7673300 8093900 23774000 16626000 22068000 12186000 14726000 25337000 26083 4497 23793 219892;219893;219894;219895;219896;219897;219898;219899;219900;219901;219902;219903;219904;219905;219906;219907;219908 175614;175615;175616;175617;175618;175619;175620;175621;175622;175623;175624;175625;175626;175627;175628 175623 5933 11 IYEDGDDDMK Unmodified 1199.4652 0.46523378 4497 Q9HB71 CACYBP Calcyclin-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.35 1 5 1 1 1 1 1 1 36.926 37.212 2 0.0070717 23644 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 98.033 91.365 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26084 4497 23793 219909;219910;219911;219912;219913;219914 175629;175630;175631;175632;175633;175634 175630 6 IYEEAWTK Unmodified 1038.5022 0.50221163 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44.64 43.522 2 0.0044102 48506 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 126.28 96.705 4836300000 10625000 335320000 6539400 3787900 6417700 12602000 178130000 355850000 254140000 828850000 893310000 1927800000 0 7818800 15088000 26085 4226 23794 219915;219916;219917;219918;219919;219920;219921;219922;219923;219924;219925;219926;219927;219928 175635;175636;175637;175638;175639;175640;175641;175642;175643;175644;175645;175646;175647;175648;175649;175650;175651 175644 16 IYEEPIILSR Unmodified 1231.6812 0.68123863 5263 Q9Y620 RAD54B DNA repair and recombination protein RAD54B yes yes 0 0 0 By matching By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 72.827 72.933 2 0.010197 83922 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 56.432 26.177 12381000 0 0 0 0 0 2918800 2842000 3443900 0 3176000 0 0 0 0 0 26086 5263 23795 219929;219930;219931;219932 175652 175652 1 IYEEPIILSREPSASEEEK Unmodified 2218.1005 0.10050849 5263 Q9Y620 RAD54B DNA repair and recombination protein RAD54B yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 69.281 68.706 3 5.7894E-31 78540 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 106.16 86.602 148570000 0 25225000 9304900 6319500 7367000 9277900 12038000 13706000 11835000 19085000 12481000 0 6897400 6056200 8977000 26087 5263 23796 219933;219934;219935;219936;219937;219938;219939;219940;219941;219942;219943;219944;219945 175653;175654;175655;175656;175657;175658;175659;175660;175661;175662;175663;175664 175653 11 IYEFPETDDEEENK Unmodified 1756.7316 0.73155546 2596 Q16181 SEPT7 Septin-7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 57.671 56.252 2 4.4336E-15 64319 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 125.74 119.51 268340000 12798000 79012000 0 10061000 9908000 12172000 9981600 9784700 8951900 15201000 36979000 18037000 14332000 11746000 19381000 26088 2596 23797 219946;219947;219948;219949;219950;219951;219952;219953;219954;219955;219956;219957;219958;219959;219960;219961 175665;175666;175667;175668;175669;175670;175671;175672;175673;175674;175675;175676;175677;175678;175679;175680;175681;175682 175668 18 IYEFTLQR Unmodified 1068.5604 0.56039521 367 O43795 MYO1B Unconventional myosin-Ib yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 67.59 67.74 2 0.014742 78096 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 69.998 25.306 75008000 0 0 0 0 5257500 6002900 4994600 8261800 4097800 8420100 6256900 8511800 8975700 6698000 7530800 26089 367 23798 219962;219963;219964;219965;219966;219967;219968;219969;219970;219971;219972 175683;175684;175685;175686;175687;175688;175689;175690;175691 175689 9 IYEGAYHVLHK Unmodified 1328.6877 0.68772099 4045 Q99685 MGLL Monoglyceride lipase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 40.128 39.636 3 0.010962 58155 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 38.58 21.009 114000000 10324000 0 0 0 0 10512000 7096000 13433000 9495200 0 8874000 14697000 9315700 5790000 24465000 26090 4045 23799 219973;219974;219975;219976;219977;219978;219979;219980;219981;219982 175692;175693 175693 2 IYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLAR Unmodified 3835.7523 0.75231426 1508 P46777 RPL5 60S ribosomal protein L5 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 96.256 90.439 3 2.4094E-22 114449 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.907 67.049 25115000 25115000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26091 1508 23800 219983;219984 175694;175695 175695 2 IYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNK Unmodified 4438.0547 0.05470387 1508 P46777 RPL5 60S ribosomal protein L5 yes yes 0 0 1 By MS/MS 2 0 1 1 95.64 87.509 4 0.017228 113136 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 18.321 14.437 8110300 8110300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26092 1508 23801 219985 175696 175696 1 IYEILPQR Unmodified 1030.5811 0.58113065 4797 Q9P0U4 CXXC1 CXXC-type zinc finger protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 61.472 61.57 2 0.0052262 69592 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.66 60.591 112950000 0 0 0 6251100 6192000 7226500 0 9328000 6526400 11157000 10550000 22277000 9119900 8573700 15745000 26093 4797 23802 219986;219987;219988;219989;219990;219991;219992;219993;219994;219995;219996 175697;175698;175699;175700;175701;175702;175703;175704 175698 6 IYELAAGGTAVGTGLNTR Unmodified 1762.9214 0.92136233 854 P07954 FH Fumarate hydratase, mitochondrial yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 71.593 71.842 2 5.2941E-26 81967 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 130.24 123.58 45582000 0 0 0 0 0 0 0 0 0 1744500 7470500 5543400 0 7152000 23672000 26094 854 23803 219997;219998;219999;220000;220001 175705;175706;175707;175708 175705 4 IYELAVWDENK Unmodified 1378.6769 0.67688153 2818 Q5VUA4 ZNF318 Zinc finger protein 318 yes yes 0 0 0 By MS/MS 2 0 1 1 46.539 39.061 3 0.032326 53992 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 31.431 7.6815 9213800 9213800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26095 2818 23804 220002 175709 175709 1 IYEPLDVK Unmodified 975.5277 0.5276981 1522 P47712 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.509 55.639 2 0.0063466 62710 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 101.64 81.088 1014800000 0 0 0 53846000 58057000 72932000 68573000 67722000 62525000 92348000 128820000 123390000 99736000 78636000 108230000 26096 1522 23805 220003;220004;220005;220006;220007;220008;220009;220010;220011;220012;220013;220014 175710;175711;175712;175713;175714;175715;175716;175717;175718;175719;175720;175721 175715 12 IYESHVGISSHEGK Unmodified 1541.7474 0.74742071 2101 Q04446 GBE1 1,4-alpha-glucan-branching enzyme yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 23.761 24.192 3 0.0017011 24430 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.158 37.798 45446000 0 0 0 0 0 4065200 0 0 0 0 6154100 7384700 0 5240500 22602000 26097 2101 23806 220015;220016;220017;220018;220019 175722 175722 1 IYESIEEAK Unmodified 1080.5339 0.53390569 455 O75116 ROCK2 Rho-associated protein kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 36.414 35.682 2 0.0012409 44305 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.06 105.17 396760000 0 307770000 2202800 4683900 4263800 10376000 7028800 5954400 5287700 8572600 11154000 6752700 5690100 7456200 9568800 26098 455 23807 220020;220021;220022;220023;220024;220025;220026;220027;220028;220029;220030;220031;220032;220033;220034 175723;175724;175725;175726;175727;175728;175729;175730;175731;175732;175733;175734;175735;175736;175737;175738;175739 175727 16 IYETLALAER Unmodified 1177.6343 0.63428844 4954 Q9UK59 DBR1 Lariat debranching enzyme yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 65.44 65.496 2 0.0096771 73992 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 66.621 23.375 94571000 0 0 0 4571900 7034500 7166000 8040000 5332200 4657500 11656000 10563000 0 8993600 8691900 17863000 26099 4954 23808 220035;220036;220037;220038;220039;220040;220041;220042;220043;220044;220045 175740;175741;175742;175743;175744;175745;175746;175747;175748;175749 175747 10 IYFMAGSSR Oxidation (M) 1046.4855 0.48551571 1002 P14625 HSP90B1 Endoplasmin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 14 1 1 2 1 2 1 1 2 1 1 1 39.485 39.631 2 0.0085076 43882 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 60.59 45.151 237560000 0 0 0 10484000 13332000 34781000 16851000 10583000 16280000 14626000 52189000 20492000 19804000 28141000 0 26100 1002 23809 220046;220047;220048;220049;220050;220051;220052;220053;220054;220055;220056;220057;220058;220059 175750;175751;175752;175753;175754;175755;175756;175757;175758;175759 175750 1360 10 IYFMAGSSR Unmodified 1030.4906 0.49060109 1002 P14625 HSP90B1 Endoplasmin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 53.447 53.588 2 5.2378E-10 60766 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 164.53 151.53 585200000 0 0 0 24232000 18287000 54893000 33000000 28801000 21223000 45911000 67696000 61947000 34770000 47952000 146490000 26101 1002 23809 220060;220061;220062;220063;220064;220065;220066;220067;220068;220069;220070;220071 175760;175761;175762;175763;175764;175765;175766;175767;175768;175769;175770;175771;175772;175773;175774;175775;175776;175777;175778;175779;175780;175781;175782;175783;175784;175785 175762 26 IYFMAGSSRK Oxidation (M) 1174.5805 0.58047873 1002 P14625 HSP90B1 Endoplasmin yes yes 0 1 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 8.67 2.98 1 5 1 1 1 1 1 1 27.913 28.242 3 0.0056748 30142 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 45.598 38.226 106790000 0 0 0 0 0 19245000 0 0 0 19584000 32369000 18567000 0 17026000 0 26102 1002 23810 220072;220073;220074;220075;220076;220077 175786;175787;175788 175786 1360 3 IYFMAGSSRK Unmodified 1158.5856 0.5855641 1002 P14625 HSP90B1 Endoplasmin yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 14 1 1 1 1 1 1 1 1 2 1 1 2 40.166 40.426 2;3 0.0029541 44739 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 58.246 43.573 521040000 0 0 0 13597000 9675800 31988000 24398000 19065000 18477000 46534000 41869000 80322000 34524000 39286000 161310000 26103 1002 23810 220078;220079;220080;220081;220082;220083;220084;220085;220086;220087;220088;220089;220090;220091 175789;175790;175791;175792;175793;175794;175795 175792 2 IYGADDIELLPEAQHK Unmodified 1810.9101 0.91012895 953 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.16 3.73 5 2 12 3 3 1 1 1 1 1 1 1 1 1 1 1 1 1 77.908 76.763 3 0.00019677 93486 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 83.856 78.483 1659200000 178590000 934020000 56044000 11653000 14228000 39147000 28655000 47694000 32903000 35477000 31544000 48636000 27735000 52351000 120560000 26104 953 23811 220092;220093;220094;220095;220096;220097;220098;220099;220100;220101;220102;220103;220104;220105;220106;220107;220108;220109;220110 175796;175797;175798;175799;175800;175801;175802;175803;175804;175805;175806;175807;175808;175809 175805 8 IYGAPGVEFTGLHR Unmodified 1515.7834 0.78341229 2517 Q15334 LLGL1 Lethal(2) giant larvae protein homolog 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 72.27 72.473 3 0.020548 83084 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 41.644 34.274 34872000 0 0 0 0 0 0 0 4305800 6379300 9351000 0 0 0 5303000 9533000 26105 2517 23812 220111;220112;220113;220114;220115;220116 175810;175811 175811 1 IYGDGNAVPR Unmodified 1060.5302 0.53015772 5075 Q9Y223 GNE Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase;UDP-N-acetylglucosamine 2-epimerase (hydrolyzing);N-acetylmannosamine kinase yes yes 0 0 0 By MS/MS By MS/MS By matching 7.33 3.77 1 2 1 1 1 32.908 31.373 2 0.016645 34959 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 49.418 31.094 41980000 0 35136000 0 0 0 4156700 0 0 0 2688300 0 0 0 0 0 26106 5075 23813 220117;220118;220119 175812;175813 175812 2 IYGDGNAVPRILK Unmodified 1414.7932 0.79324869 5075 Q9Y223 GNE Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase;UDP-N-acetylglucosamine 2-epimerase (hydrolyzing);N-acetylmannosamine kinase yes yes 0 0 1 By MS/MS 2 0 1 1 72.466 64.228 3 0.0052128 85214 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.674 44.416 17222000 17222000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26107 5075 23814 220120 175814 175814 1 IYGESADAVK Unmodified 1051.5186 0.51858998 1645 P51114 FXR1 Fragile X mental retardation syndrome-related protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 27.598 27.825 2 0.016599 28976 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.444 24.521 41318000 0 0 0 0 4295800 4233300 4666300 0 3952600 0 0 5263700 8099000 6317600 4489300 26108 1645 23815 220121;220122;220123;220124;220125;220126;220127;220128 175815;175816;175817;175818;175819 175816 5 IYGFYDECK Unmodified 1193.5063 0.50631073 1873;1872;1381 P62140;P62136;P36873 PPP1CB;PPP1CA;PPP1CC Serine/threonine-protein phosphatase PP1-beta catalytic subunit;Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit no no 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 56.212 56.616 2 0.025146 63392 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.23 49.285 25774000 0 0 0 0 0 0 0 0 0 0 7569300 0 0 4227700 13977000 26109 1873;1872;1381 23816 220129;220130;220131 175820 175820 1 IYGISFPDPK Unmodified 1135.5914 0.59136099 1209 P26639 TARS Threonine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 79.945 79.335 2 0.0017421 91638 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 88.948 76.901 1331000000 333880 461230000 18481000 14395000 13168000 24059000 20382000 23289000 13844000 36383000 147020000 122850000 22086000 88971000 324470000 26110 1209 23817 220132;220133;220134;220135;220136;220137;220138;220139;220140;220141;220142;220143;220144;220145;220146;220147 175821;175822;175823;175824;175825;175826;175827;175828;175829;175830;175831;175832;175833;175834;175835;175836;175837;175838;175839 175821 17 IYGLGSLALYEK Unmodified 1325.7231 0.72310344 1374 P36542 ATP5C1 ATP synthase subunit gamma, mitochondrial yes yes 0 0 0 By MS/MS 10 0 1 1 83.793 83.983 2 0.012063 96944 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.435 38.61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26111 1374 23818 220148 175840 175840 1 IYHEQEQALQELGNK Unmodified 1798.885 0.88497683 3582 Q8WXA3 RUFY2 RUN and FYVE domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 57.26 52.406 3 0.00023343 65273 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 83.692 56.043 22657000 0 12766000 9891300 0 0 0 0 0 0 0 0 0 0 0 0 26112 3582 23819 220149;220150 175841 175841 1 IYHEQQVK Unmodified 1043.54 0.53999412 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 0 By MS/MS 10 0 1 1 7.9861 8.3451 2 0.02313 6406 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 60.589 25.294 14700000 0 0 0 0 0 0 0 0 0 0 14700000 0 0 0 0 26113 2804 23820 220151 175842 175842 1 IYHGNCNTPIPED Unmodified 1528.6616 0.66164217 3394 Q8NBI6 XXYLT1 Xyloside xylosyltransferase 1 yes yes 0 0 0 By MS/MS 2 0 1 1 47.191 41.628 2 4.3523E-08 54293 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.57 92.309 10442000 0 10442000 0 0 0 0 0 0 0 0 0 0 0 0 0 26114 3394 23821 220152 175843 175843 1 IYHLQSK Unmodified 887.4865 0.48650199 2031 Q00169 PITPNA Phosphatidylinositol transfer protein alpha isoform yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 22.346 18.459 2 0.031783 26740 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.029 16.176 335200000 248930000 32989000 53281000 0 0 0 0 0 0 0 0 0 0 0 0 26115 2031 23822 220153;220154;220155 175844 175844 1 IYHPNIDEK Unmodified 1127.5611 0.56112349 1959 P68036;A0A1B0GUS4 UBE2L3 Ubiquitin-conjugating enzyme E2 L3 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 7.71 3.56 4 1 12 1 2 2 1 1 1 1 1 1 1 1 1 1 1 1 32.456 31.254 2 0.0005565 42046 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.35 57.282 1700000000 595790000 261750000 594700000 10747000 7971500 17345000 15594000 13064000 12386000 17926000 24873000 34074000 15961000 18736000 59108000 26116 1959 23823 220156;220157;220158;220159;220160;220161;220162;220163;220164;220165;220166;220167;220168;220169;220170;220171;220172 175845;175846;175847;175848;175849;175850;175851;175852;175853;175854;175855;175856;175857;175858;175859;175860;175861;175862;175863;175864 175849 18 IYHPNVDK Unmodified 984.50288 0.50288033 1833 P61088;Q5JXB2 UBE2N;UBE2NL Ubiquitin-conjugating enzyme E2 N;Putative ubiquitin-conjugating enzyme E2 N-like yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 4.43 3.54 4 1 2 2 2 1 1 1 23.38 20.32 2 0.0041325 27549 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.74 94.54 849260000 297280000 155230000 387160000 0 7646900 0 0 0 0 0 0 0 1940000 0 0 26117 1833 23824 220173;220174;220175;220176;220177;220178;220179 175865;175866;175867;175868;175869;175870;175871 175865 6 IYHVTVMPCYDK Unmodified 1524.7105 0.71050662 4419 Q9H6Q4 NARFL Cytosolic Fe-S cluster assembly factor NARFL yes yes 0 0 0 By MS/MS 2 0 2 2 70.115 61.83 2;3 0.008978 82374 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 36.679 23.698 69149000 69149000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26118 4419 23825 220180;220181 175872;175873 175872 2 IYHVTVMPCYDK Oxidation (M) 1540.7054 0.70542124 4419 Q9H6Q4 NARFL Cytosolic Fe-S cluster assembly factor NARFL yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 55.512 49.465 3 0.0063299 67574 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.03 58.148 36181000 27926000 0 8254700 0 0 0 0 0 0 0 0 0 0 0 0 26119 4419 23825 220182;220183 175874;175875 175874 5872 0 IYIDDNNK Unmodified 993.47673 0.47672516 1537 P48426 PIP4K2A Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha yes yes 0 0 0 By MS/MS 2 0 1 1 27.728 23.423 2 0.0024282 30809 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.25 78.417 31293000 0 31293000 0 0 0 0 0 0 0 0 0 0 0 0 0 26120 1537 23826 220184 175876 175876 1 IYIDRFEDLQK Unmodified 1438.7456 0.7456298 3370 Q8N8R7 ARL14EP ARL14 effector protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 66.908 67.202 3 0.018568 76280 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.785 29.942 19431000 0 0 0 0 0 0 0 2002000 0 2330700 2638400 3546600 0 1233400 7680300 26121 3370 23827 220185;220186;220187;220188;220189;220190 175877 175877 1 IYIDSNNNPER Unmodified 1333.6262 0.62624295 2040 Q00610 CLTC Clathrin heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 34.353 34.143 2 2.4917E-16 37820 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 192.92 129.44 1021500000 0 17096000 0 50135000 41172000 54360000 57757000 50859000 41412000 87544000 111220000 144130000 69012000 93647000 203140000 26122 2040 23828 220191;220192;220193;220194;220195;220196;220197;220198;220199;220200;220201;220202;220203 175878;175879;175880;175881;175882;175883;175884;175885;175886;175887;175888;175889 175878 7 IYIGDQVQK Unmodified 1062.571 0.5709599 4923 Q9UIA9 XPO7 Exportin-7 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 40.901 39.752 2 0.00063513 49854 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.13 49.99 458260000 26179000 328250000 4695400 7590500 3162800 14155000 4960200 4520000 3414400 11523000 10346000 10274000 5735300 7627100 15824000 26123 4923 23829 220204;220205;220206;220207;220208;220209;220210;220211;220212;220213;220214;220215;220216;220217;220218;220219 175890;175891;175892;175893;175894;175895;175896;175897;175898;175899;175900 175892 11 IYISLLK Unmodified 848.53714 0.53714057 426 O60716 CTNND1 Catenin delta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.234 77.295 2 0.023725 89171 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 84.244 4.7901 60488000 0 0 0 2211000 2918100 3952500 4465300 4931000 2774300 5036600 6949900 6990800 3840500 5238500 11179000 26124 426 23830 220220;220221;220222;220223;220224;220225;220226;220227;220228;220229;220230;220231 175901;175902 175902 2 IYISNTFSPSK Unmodified 1255.6449 0.64485312 3688 Q92925 SMARCD2 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 59.985 60.317 2 0.0012784 68585 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 84.17 70.903 46805000 0 0 0 0 0 0 0 0 0 8443300 9677500 7339500 6049400 5988100 9307500 26125 3688 23831 220232;220233;220234;220235;220236;220237;220238;220239 175903;175904;175905;175906;175907 175907 5 IYLAIESANELAVQK Unmodified 1660.9036 0.903587 3041 Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 86.343 79.711 2;3 2.723E-06 102705 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 129.82 114.85 28386000 28386000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26126 3041 23832 220240;220241;220242 175908;175909;175910;175911 175910 3 IYLDGAPNK Unmodified 989.5182 0.51819605 3903 Q96K76 USP47 Ubiquitin carboxyl-terminal hydrolase 47 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 40.98 36.531 2 0.0095683 45634 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 86.953 67.476 211750000 0 206430000 5320900 0 0 0 0 0 0 0 0 0 0 0 0 26127 3903 23833 220243;220244;220245 175912;175913;175914;175915 175915 4 IYLDLPQNFK Unmodified 1249.6707 0.67067394 4856 Q9UBS8 RNF14 E3 ubiquitin-protein ligase RNF14 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 81.961 82.098 2 0.0016604 94695 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 103.87 56.298 14444000 0 0 0 0 0 0 0 0 0 2732200 0 0 0 3762500 7949500 26128 4856 23834 220246;220247;220248;220249 175916;175917;175918 175916 3 IYLDMLNVYK Unmodified 1270.6631 0.66314572 237 O14980 XPO1 Exportin-1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 85.824 85.93 2 0.0095404 99331 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.59 36.719 12942000 0 0 0 0 0 1725800 0 0 0 1469600 0 0 0 1941400 7805300 26129 237 23835 220250;220251;220252;220253 175919 175919 1 IYLGQLQR Unmodified 989.56581 0.56581494 4435 Q9H7L9 SUDS3 Sin3 histone deacetylase corepressor complex component SDS3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.448 55.577 2 0.031664 62886 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 54.787 15.995 47637000 0 0 0 2934900 3241200 3345800 3551900 4144400 2678400 3521200 5118100 4351100 4593800 2789300 7366700 26130 4435 23836 220254;220255;220256;220257;220258;220259;220260;220261;220262;220263;220264;220265 175920;175921;175922 175921 3 IYLLPDPQK Unmodified 1085.6121 0.61209643 178 O00750 PIK3C2B Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 74.73 71.882 2 0.02512 81595 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 75.109 45.96 2078600 0 0 2078600 0 0 0 0 0 0 0 0 0 0 0 0 26131 178 23837 220266;220267;220268;220269;220270;220271;220272;220273 175923;175924;175925;175926;175927;175928;175929;175930;175931 175929 9 IYLSCLEELMK Unmodified 1397.6935 0.69345957 2557 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 97.049 92.275 2 0.0015413 114296 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.913 58.826 16446000 0 16446000 0 0 0 0 0 0 0 0 0 0 0 0 0 26132 2557 23838 220274 175932 175932 1 IYLSCLEELMK Oxidation (M) 1413.6884 0.6883742 2557 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog yes yes 0 1 0 By MS/MS 2 0 1 1 86.467 78.336 2 0.0052355 102174 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.643 56.103 5357200 5357200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26133 2557 23838 220275 175933 175933 4208 1 IYLYLTK Unmodified 912.53206 0.5320552 1440 P41250 GARS Glycine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 67.711 67.892 2 0.039143 77752 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 69.176 6.0281 39860000 0 0 0 0 2093100 0 3144100 0 0 0 8404500 7167000 0 5091800 13959000 26134 1440 23839 220276;220277;220278;220279;220280;220281 175934;175935;175936 175935 3 IYNCHVLLNSK Unmodified 1359.6969 0.69690547 3191 Q86X76 NIT1 Nitrilase homolog 1 yes yes 0 0 0 By MS/MS 2 0 1 1 53.221 45.173 3 0.0016663 61958 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.435 53.311 33175000 33175000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26135 3191 23840 220282 175937 175937 1 IYPELLK Unmodified 874.51641 0.51640513 3204 Q86Y56 DNAAF5 Dynein assembly factor 5, axonemal yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 62.829 62.996 2 0.018259 72157 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 118.69 50.653 352200000 0 0 0 0 22638000 27798000 25712000 32379000 15108000 39708000 33317000 49734000 36163000 30466000 39179000 26136 3204 23841 220283;220284;220285;220286;220287;220288;220289;220290;220291;220292;220293 175938;175939;175940;175941 175938 4 IYPGHGR Unmodified 798.41367 0.41367139 2006 P83731 RPL24 60S ribosomal protein L24 yes yes 0 0 0 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 6.8535 7.0377 2 0.044016 4384 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.994 50.446 36817000 0 0 0 0 0 0 10372000 0 9463600 0 0 0 7938900 0 9043100 26137 2006 23842 220294;220295;220296;220297 175942 175942 1 IYPSAYIK Unmodified 953.52222 0.52221879 2298 Q13485 SMAD4 Mothers against decapentaplegic homolog 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 51.929 52.148 2 0.033141 58057 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 53.891 27.026 102970000 0 0 0 0 5729200 12406000 6034900 6082500 6828800 11824000 11875000 12809000 6075900 9042400 14258000 26138 2298 23843 220298;220299;220300;220301;220302;220303;220304;220305;220306;220307;220308 175943 175943 1 IYPSREEYEAHQDR Unmodified 1791.8176 0.81762554 2130 Q06587 RING1 E3 ubiquitin-protein ligase RING1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 1 1 1 2 1 1 2 2 2 2 2 24.484 24.767 3;4 0.0013584 25052 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.136 13.145 297650000 0 0 0 11082000 11320000 16685000 12997000 17079000 12573000 17662000 26023000 44759000 30865000 22980000 73622000 26139 2130 23844 220309;220310;220311;220312;220313;220314;220315;220316;220317;220318;220319;220320;220321;220322;220323;220324;220325;220326 175944;175945;175946;175947;175948;175949;175950;175951;175952;175953;175954;175955;175956;175957 175948 12 IYPTATGEK Unmodified 978.50221 0.50221163 2113 Q05209 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.289 21.493 2 0.015842 21330 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.047 31.221 146260000 0 0 0 8536600 8330600 16764000 13263000 10687000 10007000 13592000 13530000 15209000 12258000 10009000 14073000 26140 2113 23845 220327;220328;220329;220330;220331;220332;220333;220334;220335;220336;220337;220338 175958;175959;175960 175958 3 IYPVGYFTK Unmodified 1086.575 0.57498264 2541 Q15517 CDSN Corneodesmosin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.998 72.067 2 0.024054 82761 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 50.805 38.252 828180000 0 0 0 134840000 46379000 58969000 41701000 166400000 31384000 52530000 63022000 88660000 57226000 35103000 51963000 26141 2541 23846 220339;220340;220341;220342;220343;220344;220345;220346;220347;220348;220349;220350 175961;175962 175962 2 IYQEEEMPESGAGSEFNRK Oxidation (M) 2215.9692 0.96917674 1351 P35269 GTF2F1 General transcription factor IIF subunit 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.53 1.88 1 16 1 1 1 1 2 1 2 2 2 1 1 2 39.591 39.533 3 1.6419E-17 44357 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 92.307 88.049 196020000 0 10019000 0 6828300 6511300 6041300 26456000 0 7115100 21370000 29160000 31035000 15876000 8673700 26935000 26142 1351 23847 220351;220352;220353;220354;220355;220356;220357;220358;220359;220360;220361;220362;220363;220364;220365;220366;220367 175963;175964;175965;175966;175967;175968;175969;175970;175971;175972;175973;175974;175975;175976;175977;175978;175979 175965 2053 17 IYQEEEMPESGAGSEFNRK Unmodified 2199.9743 0.97426212 1351 P35269 GTF2F1 General transcription factor IIF subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50.371 49.305 3 6.9549E-40 55308 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 117.84 105.94 504810000 9455000 58959000 15718000 24183000 22763000 19671000 27814000 26497000 31901000 34588000 55449000 49471000 37975000 20009000 70356000 26143 1351 23847 220368;220369;220370;220371;220372;220373;220374;220375;220376;220377;220378;220379;220380;220381;220382 175980;175981;175982;175983;175984;175985;175986;175987;175988;175989;175990;175991;175992;175993;175994;175995;175996;175997;175998;175999;176000;176001 175998 22 IYQGEDLPHPK Unmodified 1295.651 0.65100113 2869 Q6DD88 ATL3 Atlastin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4 3.46 3 1 2 1 1 41.302 38.586 2;3 0.010528 41648 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.444 0 76182000 0 55804000 14999000 0 0 0 0 0 0 0 0 0 0 0 5378200 26144 2869 23848 220383;220384;220385;220386 176002;176003;176004;176005;176006 176004 5 IYQHVINK Unmodified 1013.5658 0.56581494 4598 Q9NRF8 CTPS2 CTP synthase 2 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 19.528 19.742 2 0.03661 19892 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 51.787 12.463 35913000 0 0 0 2309100 2357000 3301800 0 2282400 0 4209700 5579000 5217000 0 3586200 7071300 26145 4598 23849 220387;220388;220389;220390;220391;220392;220393;220394;220395 176007 176007 1 IYQIYEGTSQIQR Unmodified 1597.81 0.81002097 944 P11310 ACADM Medium-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 60.727 61.055 2 0.00030564 68991 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.865 53.466 20234000 0 0 0 0 0 2382400 0 0 1241300 0 3540200 5089600 0 0 7980900 26146 944 23850 220396;220397;220398;220399;220400;220401 176008;176009;176010;176011 176008 4 IYQLLAK Unmodified 847.51674 0.51673948 2476 Q15021 NCAPD2 Condensin complex subunit 1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 53.449 53.342 2 0.027443 58889 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.496 32.762 47753000 0 0 0 6572900 5656500 0 10033000 0 0 0 0 0 0 0 25491000 26147 2476 23851 220402;220403;220404;220405 176012;176013;176014;176015 176013 4 IYQNIQDGSLDLNAAESGVQHK Unmodified 2399.1717 0.17171637 1834 P61106 RAB14 Ras-related protein Rab-14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 70.24 69.479 3 5.7635E-139 79821 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 190.67 165.16 759190000 0 365330000 3305800 0 11008000 52785000 14541000 22771000 32690000 41690000 45948000 45034000 23672000 31945000 68466000 26148 1834 23852 220406;220407;220408;220409;220410;220411;220412;220413;220414;220415;220416;220417;220418;220419 176016;176017;176018;176019;176020;176021;176022;176023;176024;176025;176026;176027;176028;176029;176030 176023 15 IYQNIQDGSLDLNAAESGVQHKPSAPQGGR Unmodified 3149.549 0.54900226 1834 P61106 RAB14 Ras-related protein Rab-14 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 1 1 1 2 2 1 2 1 2 65.636 65.827 3;4 2.8291E-125 75341 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 133.4 127.97 329870000 0 0 0 0 10725000 13264000 12639000 27375000 19312000 38375000 36543000 48159000 22094000 30055000 71329000 26149 1834 23853 220420;220421;220422;220423;220424;220425;220426;220427;220428;220429;220430;220431;220432;220433;220434 176031;176032;176033;176034;176035;176036;176037;176038;176039;176040;176041;176042;176043;176044;176045;176046;176047;176048 176034 18 IYQPSYLSINNEVEEK Unmodified 1924.9418 0.941823 4044 Q99683 MAP3K5 Mitogen-activated protein kinase kinase kinase 5 yes yes 0 0 0 By MS/MS 2 0 1 1 78.323 73.548 2 0.00032027 91791 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.122 70.517 19409000 0 19409000 0 0 0 0 0 0 0 0 0 0 0 0 0 26150 4044 23854 220435 176049 176049 1 IYQTTTERPFIQK Unmodified 1623.8621 0.86205654 4354 Q9H1Y0 ATG5 Autophagy protein 5 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.458 45.574 3 0.00027558 49871 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.318 66.905 97373000 0 0 0 4045300 5455800 9618700 10245000 4285600 3812000 9711100 11643000 0 8947800 8885200 20722000 26151 4354 23855 220436;220437;220438;220439;220440;220441;220442;220443;220444;220445;220446;220447 176050;176051;176052;176053;176054;176055 176052 6 IYQVLDFR Unmodified 1052.5655 0.56548059 5244 Q9Y5Q8 GTF3C5 General transcription factor 3C polypeptide 5 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.363 76.421 2 0.0043249 88144 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 111.82 69.42 127230000 0 0 0 5524500 6895900 10216000 8038400 9529100 7497900 10644000 12762000 11831000 12146000 11224000 20922000 26152 5244 23856 220448;220449;220450;220451;220452;220453;220454;220455;220456;220457;220458;220459 176056;176057;176058;176059;176060;176061;176062;176063;176064 176063 9 IYQYVINK Unmodified 1039.5702 0.57023162 1061 P17812 CTPS1 CTP synthase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48.291 47.061 2 0.0024642 63279 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 123.99 99.357 601110000 232530000 125920000 17703000 12146000 0 26662000 15066000 12214000 10399000 22009000 33528000 0 19603000 21787000 51547000 26153 1061 23857 220460;220461;220462;220463;220464;220465;220466;220467;220468;220469;220470;220471;220472;220473 176065;176066;176067;176068;176069;176070;176071;176072;176073;176074;176075;176076 176071 12 IYREIDVDR Unmodified 1177.6091 0.60913632 1057 P17655 CAPN2 Calpain-2 catalytic subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 2 1 1 1 1 1 1 1 34.505 34.687 3 0.0068478 37298 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 56.548 27.075 324970000 0 0 0 12964000 8863500 33009000 14630000 15376000 13146000 25872000 61007000 36183000 25628000 22150000 56139000 26154 1057 23858 220474;220475;220476;220477;220478;220479;220480;220481;220482;220483;220484;220485;220486 176077;176078;176079;176080;176081;176082;176083;176084;176085;176086;176087;176088;176089 176087 13 IYSFNSTNDSSGPANLDK Unmodified 1928.8752 0.8752 3095 Q7Z478 DHX29 ATP-dependent RNA helicase DHX29 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 7 3.69 1 1 3 2 1 1 1 61.387 59.446 2 7.7838E-81 74920 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 230.14 219.81 84190000 0 66714000 0 0 0 0 0 0 0 0 0 0 4945100 4618300 7913100 26155 3095 23859 220487;220488;220489;220490;220491 176090;176091 176090 2 IYSFTDNAPSPSIGGSSR Unmodified 1854.8748 0.87480607 240 O15014 ZNF609 Zinc finger protein 609 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.906 68.986 2 1.4259E-05 79280 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 93.011 70.537 51081000 0 0 0 2239100 2187400 4096100 3370800 3275900 2979800 6373600 4566800 4860200 5490800 5132600 6508300 26156 240 23860 220492;220493;220494;220495;220496;220497;220498;220499;220500;220501;220502;220503 176092;176093;176094;176095;176096;176097;176098;176099;176100;176101;176102;176103 176093 12 IYSHSLLPVLR Unmodified 1296.7554 0.75540662 1134 P22102 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 74.771 74.85 3 0.00049335 85905 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 66.92 61.705 33473000 0 0 0 0 0 23363000 0 0 10110000 0 0 0 0 0 0 26157 1134 23861 220504;220505 176104;176105 176105 2 IYSLSSQPIDHEGIK Unmodified 1685.8625 0.86245047 2988 Q6VY07 PACS1 Phosphofurin acidic cluster sorting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 4 12 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 59.741 58.468 2;3 9.7929E-06 66698 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 63.037 41.488 354480000 13064000 101380000 41396000 12376000 14596000 15702000 15125000 8865500 12240000 21112000 23849000 21236000 12465000 16011000 25062000 26158 2988 23862 220506;220507;220508;220509;220510;220511;220512;220513;220514;220515;220516;220517;220518;220519;220520;220521 176106;176107;176108;176109;176110;176111;176112;176113;176114;176115;176116;176117;176118;176119 176118 14 IYSNNQYAR Unmodified 1127.536 0.53597137 2167 Q08AM6 VAC14 Protein VAC14 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 19.828 19.994 2 0.0094557 19412 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 66.682 27.14 17979000 0 0 0 0 2333000 0 2120500 2473500 0 3530900 0 0 0 2789600 4731600 26159 2167 23863 220522;220523;220524;220525;220526;220527 176120;176121;176122;176123;176124 176123 5 IYSSEAIK Unmodified 909.48075 0.48074791 5014 Q9UM54 MYO6 Unconventional myosin-VI yes yes 0 0 0 By MS/MS By matching By matching By MS/MS 7 3.69 1 1 3 2 1 1 1 27.12 25.444 2 0.018051 26179 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.757 19.784 117490000 0 100320000 0 0 3475400 0 4773500 0 0 0 0 0 0 0 8923000 26160 5014 23864 220528;220529;220530;220531;220532 176125;176126 176126 2 IYSTCTDFER Unmodified 1290.5551 0.55505184 452 O75061 DNAJC6 Putative tyrosine-protein phosphatase auxilin yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 42.91 43.018 2 0.010295 47869 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 56.258 48.215 29726000 0 0 0 0 2439200 0 4242300 4881300 3441200 3457200 6947400 0 0 4317200 0 26161 452 23865 220533;220534;220535;220536;220537;220538;220539;220540 176127;176128;176129;176130;176131;176132 176129 6 IYSYVVSRPQPR Unmodified 1463.7885 0.78849767 3783 Q96CS3 FAF2 FAS-associated factor 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 44.707 44.899 3 0.0041632 49614 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 51.841 21.905 68161000 0 0 0 7246000 0 0 9241900 0 0 0 16295000 22123000 0 13255000 0 26162 3783 23866 220541;220542;220543;220544;220545 176133;176134 176134 2 IYTPVEESSIGK Unmodified 1321.6765 0.67654718 5013 Q9UM13 ANAPC10 Anaphase-promoting complex subunit 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.86 3.4 1 1 5 2 1 1 1 1 1 54.472 53.031 2 0.00013529 67375 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.52 115.9 217510000 0 182900000 0 0 6361200 0 6467800 4277500 0 0 0 0 0 7914900 9593400 26163 5013 23867 220546;220547;220548;220549;220550;220551;220552 176135;176136;176137;176138;176139;176140 176136 5 IYVASVHQDLSDDDIK Unmodified 1816.8843 0.88430813 4912 Q9UHX1 PUF60 Poly(U)-binding-splicing factor PUF60 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 60.618 60.723 2;3 7.3144E-72 68445 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 174.05 151.85 1349200000 0 0 0 40988000 54654000 101530000 77424000 97202000 66293000 128680000 118390000 152870000 116120000 121730000 273370000 26164 4912 23868 220553;220554;220555;220556;220557;220558;220559;220560;220561;220562;220563;220564;220565;220566;220567;220568;220569;220570;220571;220572;220573;220574;220575;220576 176141;176142;176143;176144;176145;176146;176147;176148;176149;176150;176151;176152;176153;176154;176155;176156;176157;176158;176159;176160;176161;176162;176163;176164;176165;176166 176149 25 IYVDDGLISLQVK Unmodified 1461.8079 0.80789571 1000 P14618 PKM Pyruvate kinase PKM yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.41 3.65 2 14 3 8 5 11 3 1 1 1 1 1 1 1 1 88.237 85.092 2;3 1.4639E-40 103356 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 187.97 159.76 6170400000 863370000 5146000000 128460000 0 5382100 0 5082400 3102100 7949200 0 0 11076000 0 0 0 26165 1000 23869 220577;220578;220579;220580;220581;220582;220583;220584;220585;220586;220587;220588;220589;220590;220591;220592;220593;220594;220595;220596;220597;220598;220599;220600;220601;220602;220603 176167;176168;176169;176170;176171;176172;176173;176174;176175;176176;176177;176178;176179;176180;176181;176182;176183;176184;176185;176186;176187;176188;176189;176190;176191;176192;176193;176194;176195;176196;176197;176198;176199;176200;176201;176202 176198 35 IYVEIER Unmodified 920.49673 0.49673232 130 O00232 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 50.205 50.407 2 0.026157 56857 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 79.307 27.007 149710000 0 0 0 0 16052000 0 0 0 0 31795000 40202000 52597000 0 9059500 0 26166 130 23870 220604;220605;220606;220607;220608 176203;176204;176205;176206;176207;176208 176203 6 IYVGLSK Unmodified 778.45889 0.45889025 389 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 48.162 42.362 2 0.025219 58555 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 100.74 47.557 156030000 90391000 61635000 3999500 0 0 0 0 0 0 0 0 0 0 0 0 26167 389 23871 220609;220610;220611 176209;176210;176211 176211 3 IYVGNASVAQDIPK Unmodified 1473.7827 0.78274359 1653 P51452 DUSP3 Dual specificity protein phosphatase 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 68.49 68.138 2 2.4952E-13 78109 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 133.07 115.21 827070000 0 263190000 0 31769000 38479000 54079000 46284000 44697000 37793000 54694000 46648000 48809000 41853000 41787000 76987000 26168 1653 23872 220612;220613;220614;220615;220616;220617;220618;220619;220620;220621;220622;220623;220624 176212;176213;176214;176215;176216;176217;176218;176219;176220;176221;176222;176223;176224;176225;176226 176220 15 IYVGNLPPDIR Unmodified 1255.6925 0.69247202 2145 Q07955 SRSF1 Serine/arginine-rich splicing factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 74.413 74.521 2 0.00053837 84549 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.972 41.97 194260000 0 0 0 0 14591000 0 19681000 15226000 0 26891000 28576000 0 18413000 29689000 41195000 26169 2145 23873 220625;220626;220627;220628;220629;220630;220631;220632 176227;176228;176229;176230;176231;176232;176233;176234;176235;176236;176237;176238;176239;176240;176241 176231 15 IYVGNLPTDVR Unmodified 1245.6717 0.67173657 2258 Q13242 SRSF9 Serine/arginine-rich splicing factor 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.431 68.509 2 0.0027475 77871 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.465 56.678 56444000 0 0 0 1966000 2690600 2795600 2678600 4123300 3279900 3592400 6059100 8525000 3663700 5120200 11950000 26170 2258 23874 220633;220634;220635;220636;220637;220638;220639;220640;220641;220642;220643;220644 176242;176243;176244;176245;176246;176247;176248;176249;176250;176251 176245 10 IYVISLAEPR Unmodified 1159.6601 0.66010926 1009 P14868 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.142 78.202 2 0.0041248 90400 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 73.985 62.821 301240000 0 0 0 14351000 14187000 26810000 17043000 23495000 18107000 30359000 31519000 32034000 22658000 23871000 46804000 26171 1009 23875 220645;220646;220647;220648;220649;220650;220651;220652;220653;220654;220655;220656 176252;176253;176254 176253 3 IYVSANSGAR Unmodified 1036.5302 0.53015772 2231 Q13085 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.404 23.608 2 0.012737 24943 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 51.949 24.244 118250000 0 0 0 5032400 5585100 9243700 6114000 6097500 4915200 12032000 10051000 16804000 14408000 12157000 15814000 26172 2231 23876 220657;220658;220659;220660;220661;220662;220663;220664;220665;220666;220667;220668 176255;176256;176257;176258;176259 176257 4 IYVVQPK Unmodified 845.50109 0.50108942 391 O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37.356 36.478 2 0.027199 38971 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.72 39.349 324820000 55026000 167740000 6280600 4394800 3710100 6093000 6299900 5745000 4965300 8623600 9402100 12946000 7258600 8575000 17766000 26173 391 23877 220669;220670;220671;220672;220673;220674;220675;220676;220677;220678;220679;220680;220681;220682;220683 176260;176261;176262;176263 176261 4 IYWGTATTGK Unmodified 1096.5553 0.55530983 1740 P54577 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching 6.12 3.89 3 1 4 1 2 1 1 1 1 1 50.004 47.348 2 0.0058282 60972 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.615 84.615 227060000 111340000 65704000 10229000 0 0 6602000 0 0 0 0 6453800 0 0 4492000 22232000 26174 1740 23878 220684;220685;220686;220687;220688;220689;220690;220691 176264;176265;176266;176267 176264 3 IYYGTEAQIGER Unmodified 1398.6779 0.67794416 1146 P22735 TGM1 Protein-glutamine gamma-glutamyltransferase K yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 49.755 49.528 2 0.00091386 55887 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 89.171 63.612 39293000 0 0 0 22096000 0 0 0 17198000 0 0 0 0 0 0 0 26175 1146 23879 220692;220693 176268;176269;176270 176268 3 IYYYNADDK Unmodified 1163.5135 0.5135046 2902 Q6NWY9 PRPF40B Pre-mRNA-processing factor 40 homolog B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 37.022 36.929 2 0.023307 40703 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 51.113 28.094 10650000 0 0 0 3670400 0 0 3168600 0 3810700 0 0 0 0 0 0 26176 2902 23880 220694;220695;220696 176271 176271 1 KAAEFNSNLNR Unmodified 1262.6367 0.63674805 3540 Q8WUB8 PHF10 PHD finger protein 10 yes yes 0 0 1 By MS/MS 10 0 1 1 59.422 59.57 2 0.018628 67920 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 83.168 13.343 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26177 3540 23881 220697 176272 176272 1 KADEVLEILK Unmodified 1156.6703 0.67033959 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.41 3.52 2 4 11 2 2 2 1 1 1 1 1 1 1 1 1 1 1 70.875 69.726 2;3 0.0054553 87432 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 108.7 64.889 299250000 1465700 14260000 70503000 8938600 0 17812000 9486000 15522000 11645000 21684000 21746000 27372000 20025000 25480000 33313000 26178 528 23882 220698;220699;220700;220701;220702;220703;220704;220705;220706;220707;220708;220709;220710;220711;220712;220713;220714 176273;176274;176275;176276;176277;176278;176279;176280 176279 4 KADIDLTK Unmodified 902.5073 0.50729701 1885 P62269 RPS18 40S ribosomal protein S18 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.219 20.421 2 0.044605 21301 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 102.07 12.925 569590000 0 0 0 39436000 64808000 22527000 33414000 27416000 21092000 51715000 71815000 52968000 72306000 55683000 56408000 26179 1885 23883 220715;220716;220717;220718;220719;220720;220721;220722;220723;220724;220725;220726 176281 176281 0 KADLPEQAHSIIK Unmodified 1448.7987 0.798728 204 O14727 APAF1 Apoptotic protease-activating factor 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 50.78 44.821 3 6.506E-08 62058 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.363 71.14 55132000 46329000 0 8803200 0 0 0 0 0 0 0 0 0 0 0 0 26180 204 23884 220727;220728 176282;176283 176282 0 KADPAAVVK Unmodified 897.52837 0.5283668 3339 Q8N556 AFAP1 Actin filament-associated protein 1 yes yes 0 0 1 By MS/MS 3 0 1 1 18.155 14.498 2 0.0051024 18047 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 107.69 57.567 6560400 0 6560400 0 0 0 0 0 0 0 0 0 0 0 0 0 26181 3339 23885 220729 176284 176284 0 KADVEEEFLAFRK Unmodified 1580.8199 0.81985737 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 2 By matching By MS/MS 10 0 2 1 1 69.062 69.484 3 0.013568 79246 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.843 45.928 12988000 0 0 0 0 0 0 0 0 0 0 0 2618800 0 0 10369000 26182 1492 23886 220730;220731 176285 176285 1 KADVEEEIK Unmodified 1059.5448 0.54480473 2510 Q15276 RABEP1 Rab GTPase-binding effector protein 1 yes yes 0 0 1 By MS/MS 2.67 0.471 1 2 3 23.105 19.147 2 0.006034 23479 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 133.23 52.789 49489000 0 49489000 0 0 0 0 0 0 0 0 0 0 0 0 0 26183 2510 23887 220732;220733;220734 176286;176287 176287 2 KAEAAAAPTVAPGPAQPGHVSPTPATTSPGEK Unmodified 2992.5254 0.52541327 5293 Q9Y6R0 NUMBL Numb-like protein yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 47.13 47.224 4 7.5364E-26 53043 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 58.861 52.212 85424000 0 0 0 11425000 7300500 0 9239100 6486200 8073600 9046100 13135000 0 0 11461000 9256900 26184 5293 23888 220735;220736;220737;220738;220739;220740;220741;220742;220743 176288;176289;176290;176291;176292;176293;176294;176295;176296;176297;176298 176288 11 KAEAAASALADADADLEER Unmodified 1915.9123 0.91231379 348 O43633 CHMP2A Charged multivesicular body protein 2a yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 63.291 63.485 3 0.00012836 71751 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.992 30.564 44808000 0 0 0 0 4253100 0 0 0 2544300 4196400 6546500 10791000 0 4509800 11967000 26185 348 23889 220744;220745;220746;220747;220748;220749;220750;220751 176299;176300;176301;176302;176303;176304;176305 176301 7 KAEAAASALADADADLEERLK Unmodified 2157.0913 0.091340788 348 O43633 CHMP2A Charged multivesicular body protein 2a yes yes 0 0 2 By MS/MS By MS/MS 2 0 4 2 2 82.301 75.878 3;4 3.0731E-91 97947 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 141.53 136.08 131170000 92335000 38832000 0 0 0 0 0 0 0 0 0 0 0 0 0 26186 348 23890 220752;220753;220754;220755 176306;176307;176308 176307 3 KAEADRIVFENPDPSDGFVLIPDLK Unmodified 2784.4334 0.43341037 3773 Q96C86 DCPS m7GpppX diphosphatase yes yes 0 0 2 By MS/MS 2 0 1 1 96.181 88.051 3 8.7897E-21 113754 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.297 82.708 31656000 31656000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26187 3773 23891 220756 176309 176309 1 KAEAGAGSATEFQFR Unmodified 1568.7583 0.75831975 1513 P46783;Q9NQ39 RPS10;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 1 1 1 1 2 2 1 1 2 1 2 46.841 47.052 2;3 8.3192E-08 52850 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 89.506 81.641 652240000 0 0 0 19268000 20239000 28719000 31280000 23263000 24019000 62508000 75648000 104380000 86866000 57201000 118850000 26188 1513 23892 220757;220758;220759;220760;220761;220762;220763;220764;220765;220766;220767;220768;220769;220770;220771;220772 176310;176311;176312;176313;176314;176315;176316;176317;176318;176319;176320;176321;176322;176323;176324;176325 176312 15 KAEALEAAIENLNEAK Unmodified 1712.8945 0.89447888 4945 Q9UJX4 ANAPC5 Anaphase-promoting complex subunit 5 yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76.053 75.339 3 1.1726E-10 86375 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.802 60.428 72949000 11378000 0 14660000 908910 1838700 3784700 1853300 3710600 2818900 4714900 4379200 5207000 2997000 3511900 11186000 26189 4945 23893 220773;220774;220775;220776;220777;220778;220779;220780;220781;220782;220783;220784;220785;220786 176326;176327;176328;176329;176330;176331;176332 176326 7 KAEDLFQDAYYQSPETR Unmodified 2059.9487 0.9486993 678 O95671 ASMTL N-acetylserotonin O-methyltransferase-like protein yes yes 0 0 1 By MS/MS 10 0 1 1 67.183 67.701 3 0.0003351 76933 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.487 47.883 8752900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8752900 26190 678 23894 220787 176333 176333 1 KAEEEAEAKPK Unmodified 1228.6299 0.62993134 4168 Q9BUQ8 DDX23 Probable ATP-dependent RNA helicase DDX23 yes yes 0 0 2 By MS/MS 2.5 0.5 1 1 2 5.7604 2.4596 3 0.023203 3880 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 59.84 49.847 20514000 0 20514000 0 0 0 0 0 0 0 0 0 0 0 0 0 26191 4168 23895 220788;220789 176334 176334 0 KAEEELGELEAK Unmodified 1344.6773 0.67727546 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 0 1 By MS/MS By matching 10 0 2 1 1 37.978 38.524 2 0.010978 42218 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 68.676 48.535 12001000 0 0 0 0 0 0 0 0 0 0 0 6255000 5745800 0 0 26192 5071 23896 220790;220791 176335 176335 1 KAEEIANEMIEAAK Unmodified 1545.7709 0.77085827 1578 P49588 AARS Alanine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.96 3.45 6 1 20 2 3 2 1 1 2 1 2 1 2 2 2 2 2 2 62.651 61.275 2;3 6.5469E-101 80488 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 244.58 220.29 2558700000 286020000 1788800000 269440000 2875400 2320800 11336000 2807500 9319100 3422100 18324000 22301000 21386000 11780000 19764000 88814000 26193 1578 23897 220792;220793;220794;220795;220796;220797;220798;220799;220800;220801;220802;220803;220804;220805;220806;220807;220808;220809;220810;220811;220812;220813;220814;220815;220816;220817;220818 176336;176337;176338;176339;176340;176341;176342;176343;176344;176345;176346;176347;176348;176349;176350;176351;176352;176353;176354;176355;176356;176357;176358;176359 176340 21 KAEEIANEMIEAAK Oxidation (M) 1561.7658 0.76577289 1578 P49588 AARS Alanine--tRNA ligase, cytoplasmic yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.89 3.63 4 2 3 1 3 2 1 1 1 36.381 33.474 2;3 1.5281E-23 43710 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 132.51 108.04 464510000 7197900 286420000 140350000 0 0 0 0 0 0 0 11562000 0 0 5799700 13172000 26194 1578 23897 220819;220820;220821;220822;220823;220824;220825;220826;220827 176360;176361;176362;176363;176364 176360 2529 5 KAEENAEGGESALGPDGEPIDESSQMSDLPVK Unmodified 3285.4831 0.48307527 1655 P51531 SMARCA2 Probable global transcription activator SNF2L2 yes yes 0 0 1 By MS/MS 2 0 1 1 77.371 72.596 3 1.176E-67 90626 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.63 109.26 24449000 0 24449000 0 0 0 0 0 0 0 0 0 0 0 0 0 26195 1655 23898 220828 176365 176365 1 KAEENAEGGESALGPDGEPIDESSQMSDLPVK Oxidation (M) 3301.478 0.47798989 1655 P51531 SMARCA2 Probable global transcription activator SNF2L2 yes yes 0 1 1 By MS/MS 10 0 1 1 64.478 64.922 3 5.3932E-21 74151 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 52.198 46.418 7383200 0 0 0 0 0 0 0 0 0 0 0 7383200 0 0 0 26196 1655 23898 220829 176366 176366 2662 1 KAEGAATEEEGTPK Unmodified 1416.6733 0.67325272 1993 P80723 BASP1 Brain acid soluble protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.61 4 1 34 1 3 1 3 3 3 3 3 3 3 2 3 3 2 3 7.773 7.4673 2;3 9.8302E-19 9240 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.11 86.708 1881000000 17699000 655870000 5653500 35793000 47775000 37304000 45721000 57100000 45421000 75377000 320760000 181830000 92465000 103680000 158500000 26197 1993 23899 220830;220831;220832;220833;220834;220835;220836;220837;220838;220839;220840;220841;220842;220843;220844;220845;220846;220847;220848;220849;220850;220851;220852;220853;220854;220855;220856;220857;220858;220859;220860;220861;220862;220863;220864;220865;220866;220867;220868 176367;176368;176369;176370;176371;176372;176373;176374;176375;176376;176377;176378;176379;176380;176381;176382 176370 2 KAEGGGGGGRPGAPAAGDGK Unmodified 1665.8183 0.81829425 2046 Q00839 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 2 24 1 1 2 2 2 2 2 2 2 2 2 2 2 2 6.5624 6.4566 3;4 6.9303E-08 7958 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.436 69.645 4433300000 393150000 0 55480000 211950000 321680000 121530000 300240000 240120000 208090000 359290000 487260000 535540000 437700000 380450000 380850000 26198 2046 23900 220869;220870;220871;220872;220873;220874;220875;220876;220877;220878;220879;220880;220881;220882;220883;220884;220885;220886;220887;220888;220889;220890;220891;220892;220893;220894 176383;176384;176385;176386;176387;176388;176389;176390;176391;176392;176393;176394 176386 9 KAELDIDALNGR Unmodified 1313.6939 0.69392858 4814 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 56.787 57.055 3 0.0041487 64052 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 34.386 25.098 21305000 0 0 0 0 0 0 3049900 7595900 0 0 0 0 0 4066600 6593000 26199 4814 23901 220895;220896;220897;220898;220899;220900 176395;176396;176397;176398;176399 176398 5 KAELEENQRSYK Unmodified 1493.7474 0.74742071 1498 P46100 ATRX Transcriptional regulator ATRX yes yes 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 15.185 11.976 3 0.033597 17440 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.481 28.359 24168000 11651000 0 12517000 0 0 0 0 0 0 0 0 0 0 0 0 26200 1498 23902 220901;220902 176400 176400 0 KAELEGVAVTAPRK Unmodified 1467.8409 0.84092717 5178 Q9Y3X0 CCDC9 Coiled-coil domain-containing protein 9 yes yes 0 0 2 By MS/MS 2 0 1 1 44.615 37.749 3 0.010603 51836 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.514 46.442 39170000 39170000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26201 5178 23903 220903 176401 176401 0 KAELLDNEK Unmodified 1058.5608 0.56078914 4497 Q9HB71 CACYBP Calcyclin-binding protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.39 3.7 5 1 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 17.813 16.615 2 1.2135E-158 14774 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 237.44 130.53 2307800000 211830000 1015000000 274490000 24305000 17053000 65039000 34860000 26106000 23090000 62492000 95836000 115310000 64970000 93715000 183650000 26202 4497 23904 220904;220905;220906;220907;220908;220909;220910;220911;220912;220913;220914;220915;220916;220917;220918;220919;220920;220921 176402;176403;176404;176405;176406;176407;176408;176409;176410;176411;176412;176413;176414;176415;176416;176417;176418;176419;176420 176407 16 KAENAEGQTPAIGPDGEPLDETSQMSDLPVK Oxidation (M) 3239.514 0.51398147 1656 P51532 SMARCA4 Transcription activator BRG1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 70.018 70.085 3 6.9748E-40 80481 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 78.286 72.999 70490000 0 0 0 6391900 8306100 0 6689100 0 0 8675800 7293200 12487000 8409500 5604400 6633000 26203 1656 23905 220922;220923;220924;220925;220926;220927;220928;220929;220930 176421;176422;176423;176424;176425;176426;176427;176428;176429;176430 176424 2667 10 KAENAEGQTPAIGPDGEPLDETSQMSDLPVK Unmodified 3223.5191 0.51906685 1656 P51532 SMARCA4 Transcription activator BRG1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 77.42 76.799 3 4.146E-78 94389 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.23 105.09 118290000 0 60252000 0 1527700 3490300 0 2898300 6666300 2894500 7317000 7981000 5933700 0 6942100 12385000 26204 1656 23905 220931;220932;220933;220934;220935;220936;220937;220938;220939;220940;220941;220942 176431;176432;176433;176434;176435;176436;176437;176438;176439;176440 176433 10 KAEPSEVDMNSPK Unmodified 1430.6711 0.67114423 4588 Q9NR30 DDX21 Nucleolar RNA helicase 2 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 22.935 22.406 3 0.010926 22921 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 23.489 15.174 116020000 0 22935000 0 0 4144300 7368400 11936000 5154700 6379800 9672200 0 10352000 9524400 11708000 16849000 26205 4588 23906 220943;220944;220945;220946;220947;220948;220949;220950;220951;220952;220953;220954 176441;176442;176443;176444 176444 3 KAERELSEQIQR Unmodified 1485.79 0.78995423 1017 P15311 EZR Ezrin yes yes 0 0 2 By MS/MS 2 0 1 1 28.269 22.751 3 8.7232E-05 32161 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.101 70.028 67618000 67618000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26206 1017 23907 220955 176445 176445 1 KAESFAQEMFIEQNK Unmodified 1798.856 0.85598488 6 A0MZ66 KIAA1598 Shootin-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 73.006 69.476 2;3 2.7294E-39 91605 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 143.25 110.75 43957000 11860000 0 20041000 0 0 0 0 0 0 0 0 0 0 0 12056000 26207 6 23908 220956;220957;220958 176446;176447;176448;176449 176448 4 KAESFAQEMFIEQNK Oxidation (M) 1814.8509 0.85089951 6 A0MZ66 KIAA1598 Shootin-1 yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 58.695 52.648 3 2.0111E-05 65666 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 97.797 92.742 25291000 12836000 0 12456000 0 0 0 0 0 0 0 0 0 0 0 0 26208 6 23908 220959;220960 176450;176451 176451 9 2 KAESTESIGSSEK Unmodified 1351.6467 0.64670362 4267 Q9BZI7 UPF3B Regulator of nonsense transcripts 3B yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 7.69 3.47 2 2 9 4 1 1 1 1 1 1 1 1 1 8.8721 7.9479 2;3 0.013681 5614 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 20.432 11.542 42639000 0 19468000 0 837990 0 1061000 2079600 2187300 2322100 1811200 6524900 0 0 1992600 4354800 26209 4267 23909 220961;220962;220963;220964;220965;220966;220967;220968;220969;220970;220971;220972;220973 176452;176453;176454;176455;176456;176457;176458 176455 4 KAGGGGGK Unmodified 630.34492 0.34492313 1109 P20648 ATP4A Potassium-transporting ATPase alpha chain 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 20.743 17.034 1 0.04316 24734 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 37.094 37.094 156390000 138930000 0 17459000 0 0 0 0 0 0 0 0 0 0 0 0 26210 1109 23910 220974;220975 176459 176459 0 KAKESEDK Unmodified 933.47673 0.47672516 2748 Q5MIZ7 SMEK2 Serine/threonine-protein phosphatase 4 regulatory subunit 3B yes yes 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 15.377 12.119 2 0.033059 15211 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 107.29 46.535 50384000 40773000 0 9611000 0 0 0 0 0 0 0 0 0 0 0 0 26211 2748 23911 220976;220977 176460 176460 0 KALEDEK Unmodified 831.4338 0.43379771 2741 Q5JTW2 CEP78 Centrosomal protein of 78 kDa yes yes 0 0 1 By MS/MS 3 0 1 1 2.9392 -0.44036 2 0.048862 1957 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 120.46 0 17230000 0 17230000 0 0 0 0 0 0 0 0 0 0 0 0 0 26212 2741 23912 220978 176461 176461 0 KALEDIDEK Unmodified 1059.5448 0.54480473 3591 Q8WXH0 SYNE2 Nesprin-2 yes yes 0 0 1 By MS/MS By MS/MS 2.67 0.471 1 2 1 2 24.236 19.992 2 0.0014182 24844 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 125.82 44.269 38904000 352810 38552000 0 0 0 0 0 0 0 0 0 0 0 0 0 26213 3591 23913 220979;220980;220981 176462;176463 176463 2 KANDGEGGDEEAGTEEAVPR Unmodified 2029.8825 0.88247022 4383 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 25.965 26.258 3 0.0021341 27958 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 32.305 28.701 34534000 0 0 0 5127800 0 0 3292200 2264100 0 2720100 6575000 6641900 3079000 2397700 2436200 26214 4383 23914 220982;220983;220984;220985;220986;220987;220988;220989;220990 176464;176465;176466 176465 3 KAPAEGVLTLR Unmodified 1153.6819 0.68190733 4423 Q9H6S3 EPS8L2 Epidermal growth factor receptor kinase substrate 8-like protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 48.275 48.507 3 0.0016152 54363 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 47.429 36.524 79147000 0 0 0 0 3377300 6663600 4763600 4300700 6353200 10968000 9313100 9555400 8782700 6181100 8888200 26215 4423 23915 220991;220992;220993;220994;220995;220996;220997;220998;220999;221000;221001 176467;176468;176469;176470;176471;176472;176473 176467 7 KAPAGQEEPGTPPSSPLSAEQLDR Unmodified 2461.2085 0.20849581 975 P13051 UNG Uracil-DNA glycosylase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 58.292 58.55 3 1.2834E-05 66047 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.086 32.399 24572000 0 0 0 0 0 3234500 5155300 0 0 3247900 6536400 0 0 0 6398000 26216 975 23916 221002;221003;221004;221005;221006 176474;176475;176476;176477;176478;176479 176478 6 KAPAPVTPPAPVQNK Unmodified 1513.8617 0.86166261 2097;913 Q03468;P0DP91 ERCC6 DNA excision repair protein ERCC-6 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 37.646 37.773 3 0.0032707 41652 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 27.938 23.136 37418000 0 0 0 4776000 5084900 0 0 0 2757600 7366600 5977700 6486600 4969100 0 0 26217 2097;913 23917 221007;221008;221009;221010;221011;221012;221013 176480;176481;176482 176480 3 KAPDAEELDK Unmodified 1114.5506 0.55061839 4921 Q9UI42 CPA4 Carboxypeptidase A4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.12 3.26 1 1 6 2 1 1 1 1 1 1 18.181 17.301 2 0.014911 17550 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 101.3 47.802 104990000 0 40879000 0 39305000 5856900 0 4357800 9251100 0 4516600 0 0 0 0 822460 26218 4921 23918 221014;221015;221016;221017;221018;221019;221020;221021 176483;176484 176484 2 KAPDFVFYAPR Unmodified 1309.6819 0.68190733 1198;1017;1345 P26038;P35241;P15311 MSN;RDX;EZR Moesin;Radixin;Ezrin no no 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 1 1 1 1 1 2 2 71.858 71.958 2;3 0.0020876 83236 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 42.243 37.538 290170000 0 0 0 7553000 3020500 8175600 7159500 9105500 4331300 7846400 23481000 27610000 7106600 31174000 153600000 26219 1198;1345;1017 23919 221022;221023;221024;221025;221026;221027;221028;221029;221030;221031;221032;221033;221034;221035 176485;176486;176487;176488;176489;176490;176491;176492;176493;176494;176495;176496 176493 9 KAPGCVLSNPDQK Unmodified 1412.7082 0.70819844 869 P08651 NFIC Nuclear factor 1 C-type yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.58 1.79 1 18 1 1 1 1 1 1 1 2 2 2 2 2 2 25.335 25.302 2;3 3.2898E-07 35378 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 111.63 80.208 246990000 32893000 0 0 18049000 14291000 5185000 15901000 12298000 10731000 15116000 24136000 15200000 20826000 28223000 34137000 26220 869 23920 221036;221037;221038;221039;221040;221041;221042;221043;221044;221045;221046;221047;221048;221049;221050;221051;221052;221053;221054 176497;176498;176499;176500;176501;176502;176503;176504;176505;176506;176507;176508;176509;176510;176511 176501 11 KAPIFTSEQGEK Unmodified 1333.6878 0.68778057 1035 P16333 NCK1 Cytoplasmic protein NCK1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 4 2 2 33.641 28.85 2;3 4.8939E-05 40857 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 145.41 124.57 189370000 170650000 0 18718000 0 0 0 0 0 0 0 0 0 0 0 0 26221 1035 23921 221055;221056;221057;221058 176512;176513;176514 176513 2 KAPIQTYVLGANNQETVK Unmodified 1973.0582 0.058190166 2862 Q69YN2 CWF19L1 CWF19-like protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 69.392 61.106 3 0.014565 81476 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 31.358 22.539 16221000 16221000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26222 2862 23922 221059 176515 176515 1 KAPNLTAQAAPR Unmodified 1236.6939 0.693869 3703 Q93015 NAT6 N-acetyltransferase 6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 2 2 2 1 2 1 25.794 25.966 2;3 1.0176E-08 27665 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 103.43 91.967 389140000 0 0 0 0 7148800 5227000 115400000 102060000 80481000 25446000 20970000 32404000 0 0 0 26223 3703 23923 221060;221061;221062;221063;221064;221065;221066;221067;221068;221069;221070;221071 176516;176517;176518;176519;176520;176521;176522;176523;176524;176525;176526 176522 10 KAPPPPPTSMPK Unmodified 1246.6744 0.67437911 242 O15027 SEC16A Protein transport protein Sec16A yes yes 0 0 1 By MS/MS 10 0 1 1 29.018 29.713 3 0.038549 31103 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 17.005 0 5812600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5812600 26224 242 23924 221072 176527 176527 1 KAPTPQEK Unmodified 897.49198 0.4919813 1351 P35269 GTF2F1 General transcription factor IIF subunit 1 yes yes 0 0 1 By MS/MS 3 0 1 1 5.7148 2.3536 2 0.043142 3751 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 102 57.885 34457000 0 34457000 0 0 0 0 0 0 0 0 0 0 0 0 0 26225 1351 23925 221073 176528 176528 1 KATDAEADVASLNRR Unmodified 1615.8278 0.8277963 90;853;884 CON__Q3SX28;P07951;P09493 TPM2;TPM1 Tropomyosin beta chain;Tropomyosin alpha-1 chain no no 0 0 2 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 33.169 33.527 3 0.047474 36040 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 41.912 28.047 + 30369000 0 0 0 0 2335200 0 0 0 0 0 7923600 12974000 0 2695800 4439800 26226 90;853;884 23926 221074;221075;221076;221077;221078 176529 176529 1 KCDEYIEALNTGK Unmodified 1539.7239 0.72390808 217 O14802 POLR3A DNA-directed RNA polymerase III subunit RPC1 yes yes 0 0 1 By MS/MS 3 0 1 1 53.531 48.642 3 0.014183 60205 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 30.308 26.446 2747400 0 2747400 0 0 0 0 0 0 0 0 0 0 0 0 0 26227 217 23927 221079 176530 176530 1 KCDLISIPK Unmodified 1072.5951 0.59506616 5008 Q9ULV4 CORO1C Coronin-1C yes yes 0 0 1 By MS/MS 2 0 1 1 57.832 54.005 2 0.040467 67372 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 89.029 43.057 21922000 0 0 21922000 0 0 0 0 0 0 0 0 0 0 0 0 26228 5008 23928 221080 176531 176531 0 KCPSTHSEELHDCIQK Unmodified 1967.8829 0.88294469 1541 P48507 GCLM Glutamate--cysteine ligase regulatory subunit yes yes 0 0 1 By MS/MS 2 0 1 1 26.49 21.267 3 6.4747E-43 29889 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 152.34 141.29 29643000 29643000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26229 1541 23929 221081 176532;176533 176533 2 KDCEVVMMIGLPGAGK 2 Oxidation (M) 1735.8307 0.83069811 2046 Q00839 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 0 2 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 61.12 61.421 3 3.2664E-08 69264 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 85.493 77.712 103000000 0 0 0 0 0 0 0 0 14540000 0 24289000 44003000 0 20172000 0 26230 2046 23930 221082;221083;221084;221085 176534;176535;176536;176537;176538 176537 3308;3309 5 KDDDDEEIGGPK Unmodified 1316.5732 0.57320432 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 2 2 2 2 2 2 13.691 13.926 2;3 0.0005451 12823 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 104.79 82.055 121900000 0 0 0 0 0 0 4227500 4330900 9700700 27195000 30501000 45947000 0 0 0 26231 4226 23931 221086;221087;221088;221089;221090;221091;221092;221093;221094;221095;221096;221097 176539;176540;176541;176542;176543 176542 4 KDDEENYLDLFSHK Unmodified 1751.8002 0.80024414 2138 Q07666 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.35 3.88 6 2 9 4 3 1 1 1 1 1 1 1 1 1 1 76.952 75.228 3;4 5.1465E-15 94515 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.853 80.368 959040000 688470000 186290000 7292500 0 0 6790800 0 4325300 5489400 3833000 4557200 9981700 4219500 6178700 31612000 26232 2138 23932 221098;221099;221100;221101;221102;221103;221104;221105;221106;221107;221108;221109;221110;221111;221112;221113;221114 176544;176545;176546;176547;176548;176549;176550;176551;176552;176553 176544 7 KDDENIPMETEETHLEETTESQQNGEEGTSTPEDK Oxidation (M) 3992.6713 0.67128256 3714 Q969G3 SMARCE1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 yes yes 0 1 1 By MS/MS 2 0 1 1 54.696 46.588 4 1.4516E-19 63983 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.302 58.027 19620000 19620000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26233 3714 23933 221115 176554;176555 176555 5292 2 KDDENIPMETEETHLEETTESQQNGEEGTSTPEDK Unmodified 3976.6764 0.67636794 3714 Q969G3 SMARCE1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 64.147 58.122 4 3.5118E-19 77250 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.397 64.397 22622000 15416000 0 7206200 0 0 0 0 0 0 0 0 0 0 0 0 26234 3714 23933 221116;221117 176556;176557 176556 1 KDDESNLVEEK Unmodified 1304.6096 0.60958983 2143 Q07866 KLC1 Kinesin light chain 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 6.83 3.76 3 2 7 1 4 1 1 1 1 1 1 1 20.464 18.879 2;3 4.8751E-98 24068 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 268.91 169.1 176690000 10864000 114660000 0 4546300 0 5490500 0 5622800 4023700 9005500 9102000 13377000 0 0 0 26235 2143 23934 221118;221119;221120;221121;221122;221123;221124;221125;221126;221127;221128;221129 176558;176559;176560;176561;176562;176563;176564 176560 6 KDDFVLDSEYLVTLLVVVPK Unmodified 2291.2665 0.26645161 1122 P21283 ATP6V1C1 V-type proton ATPase subunit C 1 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 103.57 97.694 3 5.3434E-05 103799 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 58.49 55.481 9896200 9896200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26236 1122 23935 221130;221131 176565;176566 176565 2 KDDINLLPSK Unmodified 1141.6343 0.63428844 5009 Q9ULW0 TPX2 Targeting protein for Xklp2 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.073 48.235 3 0.001135 54368 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 62.166 52.972 86298000 0 0 0 4593600 4966900 7192200 5579600 6452700 7396100 7105800 8830000 9776700 7069200 6836700 10498000 26237 5009 23936 221132;221133;221134;221135;221136;221137;221138;221139;221140;221141;221142;221143 176567;176568;176569;176570;176571;176572;176573;176574 176571 8 KDDQMLK Unmodified 876.4375 0.43750288 1682 P52292 KPNA2 Importin subunit alpha-1 yes yes 0 0 1 By MS/MS 3 0 1 1 9.6619 6.2995 2 0.030434 8389 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 137.18 72.376 9294400 0 9294400 0 0 0 0 0 0 0 0 0 0 0 0 0 26238 1682 23937 221144 176575 176575 0 KDDSETPHLK Unmodified 1168.5724 0.57241646 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 1 By MS/MS 3 0 1 1 13.286 9.8645 3 0.018204 12391 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 41.399 25.77 7920700 0 7920700 0 0 0 0 0 0 0 0 0 0 0 0 0 26239 3443 23938 221145 176576 176576 1 KDDSFLGK Unmodified 908.46035 0.46034682 4665 Q9NVD7 PARVA Alpha-parvin yes yes 0 0 1 By MS/MS 3 0 1 1 26.109 21.973 2 0.019728 27489 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 109.71 66.591 16612000 0 16612000 0 0 0 0 0 0 0 0 0 0 0 0 0 26240 4665 23939 221146 176577 176577 0 KDDTDDEIAK Unmodified 1148.5197 0.51971219 1227 P27824 CANX Calnexin yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 9.5876 6.279 2 0.014002 8515 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 117.7 83.445 30437000 0 30437000 0 0 0 0 0 0 0 0 0 0 0 0 0 26241 1227 23940 221147;221148 176578 176578 0 KDDVTSSTGPHK Unmodified 1270.6153 0.61534391 2768 Q5T1M5 FKBP15 FK506-binding protein 15 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 6.4595 3.396 3 0.015574 4766 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 35.657 23.026 155000000 27818000 106310000 20867000 0 0 0 0 0 0 0 0 0 0 0 0 26242 2768 23941 221149;221150;221151;221152 176579;176580 176580 2 KDECEEMLK Oxidation (M) 1196.5053 0.50532445 1636 P50748 KNTC1 Kinetochore-associated protein 1 yes yes 0 1 1 By MS/MS 3 0 1 1 10.555 7.183 3 0.023271 9317 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 44.98 36.76 5076400 0 5076400 0 0 0 0 0 0 0 0 0 0 0 0 0 26243 1636 23942 221153 176581 176581 1 KDECEEMLK Unmodified 1180.5104 0.51040983 1636 P50748 KNTC1 Kinetochore-associated protein 1 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 23.97 19.925 3 0.042603 24930 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 40.058 31.838 16900000 0 16900000 0 0 0 0 0 0 0 0 0 0 0 0 0 26244 1636 23942 221154;221155 176582 176582 0 KDEDIPLFPVQTK Unmodified 1528.8137 0.81370936 4302 Q9GZR7 DDX24 ATP-dependent RNA helicase DDX24 yes yes 0 0 1 By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 9 2.45 1 6 1 1 1 1 1 1 1 74.802 74.455 3 0.0050678 89891 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 42.317 34.593 24218000 0 4253100 0 0 0 1918300 0 0 1660100 0 0 2848300 3984600 3398200 6155400 26245 4302 23943 221156;221157;221158;221159;221160;221161;221162 176583;176584 176583 2 KDEEHILSGR Unmodified 1182.5993 0.59929991 3265 Q8IXQ4 GPALPP1 GPALPP motifs-containing protein 1 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 16.964 17.322 3 0.037155 16207 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 22.479 12.02 15531000 0 0 0 0 0 0 0 0 532590 0 0 5152900 2597800 3369000 3878700 26246 3265 23944 221163;221164;221165;221166;221167 176585 176585 1 KDEELDPMDPSSYSDAPR Unmodified 2050.879 0.87896475 435 O60828 PQBP1 Polyglutamine-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 63.097 63.419 3 0.039201 72321 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 13.378 10.702 69880000 0 0 0 0 0 0 0 8915400 0 0 8067800 13713000 7910400 9983200 21290000 26247 435 23945 221168;221169;221170;221171;221172;221173 176586;176587 176587 1 KDEELDPMDPSSYSDAPR Oxidation (M) 2066.8739 0.87387937 435 O60828 PQBP1 Polyglutamine-binding protein 1 yes yes 0 1 1 By MS/MS By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 14 2 1 1 1 2 1 1 2 1 1 1 47.289 47.391 3 6.2591E-05 54302 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 58.49 53.588 89341000 0 0 0 10222000 7284600 3637400 5854700 9210400 3886800 8009300 11029000 13420000 6590200 0 10196000 26248 435 23945 221174;221175;221176;221177;221178;221179;221180;221181;221182;221183;221184;221185;221186;221187 176588;176589;176590;176591 176591 558 4 KDEESGGGSNPFQHLEK Unmodified 1857.8493 0.8493196 5267 Q9Y678 COPG1 Coatomer subunit gamma-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 6 21 2 2 2 1 2 1 2 1 2 2 2 2 2 2 2 42.629 41.485 3;4 3.8751E-13 53505 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 82.349 75.942 534640000 66162000 50419000 111820000 12111000 8749300 22585000 23595000 13522000 16547000 37778000 19698000 44525000 33719000 25719000 47683000 26249 5267 23946 221188;221189;221190;221191;221192;221193;221194;221195;221196;221197;221198;221199;221200;221201;221202;221203;221204;221205;221206;221207;221208;221209;221210;221211;221212;221213;221214 176592;176593;176594;176595;176596;176597;176598;176599;176600;176601;176602;176603;176604;176605;176606;176607;176608 176602 15 KDEESGSGSNPFQHLEK Unmodified 1887.8599 0.85988429 4839 Q9UBF2 COPG2 Coatomer subunit gamma-2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 48.311 42.435 3 0.00035148 53500 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 60.949 60.949 23760000 6408500 0 17351000 0 0 0 0 0 0 0 0 0 0 0 0 26250 4839 23947 221215;221216 176609;176610 176610 2 KDEEVLK Unmodified 859.4651 0.46509784 2347;118 O00148;Q13838 DDX39A;DDX39B ATP-dependent RNA helicase DDX39A;Spliceosome RNA helicase DDX39B no no 0 0 1 By MS/MS 2 0 1 1 10.196 6.9315 2 0.03048 9744 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 146.54 21.655 969260000 0 969260000 0 0 0 0 0 0 0 0 0 0 0 0 0 26251 118;2347 23948 221217 176611 176611 1 KDEISVDSLDFNK Unmodified 1508.7359 0.73585297 1941;2847 P63151;Q66LE6 PPP2R2A;PPP2R2D Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform no no 0 0 1 By MS/MS 3 0 1 1 71.329 66.736 3 0.01919 81335 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 27.458 19.914 11865000 0 11865000 0 0 0 0 0 0 0 0 0 0 0 0 0 26252 1941;2847 23949 221218 176612 176612 1 KDELDSLITAITTNGAHPSK Unmodified 2110.0906 0.090612506 2298 Q13485 SMAD4 Mothers against decapentaplegic homolog 4 yes yes 0 0 1 By MS/MS 2 0 1 1 94.772 89.907 3 1.1718E-08 111561 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.214 66.027 10848000 0 10848000 0 0 0 0 0 0 0 0 0 0 0 0 0 26253 2298 23950 221219 176613;176614 176614 2 KDENEIEK Unmodified 1003.4822 0.48220447 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 6.0898 2.789 2 0.049127 4194 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 96.948 17.479 226720000 0 226720000 0 0 0 0 0 0 0 0 0 0 0 0 0 26254 2431 23951 221220;221221 176615 176615 1 KDENESSAPADGEGGSELQPK Unmodified 2143.9505 0.95054979 2548 Q15554 TERF2 Telomeric repeat-binding factor 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 26.45 26.608 3 1.0774E-28 28076 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 71.309 56.116 48942000 0 0 0 4097000 4335000 5661200 4857800 5180600 3850400 0 0 8660900 0 6307700 5991700 26255 2548 23952 221222;221223;221224;221225;221226;221227;221228;221229;221230 176616;176617;176618;176619;176620;176621;176622 176620 7 KDEQEHEFYK Unmodified 1351.6044 0.60444487 1482 P43686 PSMC4 26S protease regulatory subunit 6B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.24 2 1 10 1 1 1 1 1 1 1 1 1 1 1 1 1 15.788 15.088 3 0.00062588 13578 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 99.343 84.199 612560000 37318000 11585000 97843000 22225000 20021000 29419000 0 6577600 0 73995000 74948000 142320000 17557000 12892000 65860000 26256 1482 23953 221231;221232;221233;221234;221235;221236;221237;221238;221239;221240;221241;221242;221243 176623;176624;176625;176626;176627;176628;176629;176630;176631;176632;176633;176634 176625 10 KDEVCVNPYHYQR Unmodified 1706.7835 0.78348864 2579;2010 Q15796;P84022 SMAD2;SMAD3 Mothers against decapentaplegic homolog 2;Mothers against decapentaplegic homolog 3 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 36.951 37.131 3;4 1.0225E-05 39716 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.814 67.709 196160000 0 0 0 8580200 7703900 15332000 11034000 4686900 11688000 16562000 20801000 22351000 25881000 22199000 29335000 26257 2579;2010 23954 221244;221245;221246;221247;221248;221249;221250;221251;221252;221253;221254;221255;221256;221257;221258;221259;221260;221261;221262;221263;221264;221265;221266;221267 176635;176636;176637;176638;176639;176640;176641;176642;176643;176644;176645;176646;176647;176648;176649;176650 176638 14 KDFEEEDVILQPEK Unmodified 1717.841 0.84104633 20 A6H8Y1 BDP1 Transcription factor TFIIIB component B'' homolog yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 24.006 24.106 3 0.024692 24021 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 18.829 1.4269 18926000 0 0 0 1406200 1111600 1764700 1971300 1850800 0 2889400 0 0 0 2187000 5745100 26258 20 23955 221268;221269;221270;221271;221272;221273;221274;221275 176651 176651 1 KDGADFAK Unmodified 850.41848 0.418482 771;897 P04075;P09972 ALDOA;ALDOC Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase C no no 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 8.7687 5.8206 2 0.024324 7874 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 130.75 75.072 995920000 0 976230000 19694000 0 0 0 0 0 0 0 0 0 0 0 0 26259 771;897 23956 221276;221277;221278 176652;176653;176654;176655 176653 3 KDISAMEEEK Unmodified 1178.5489 0.54890383 3599 Q8WYA0 IFT81 Intraflagellar transport protein 81 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.638 68.718 3 0.024089 78055 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 27.481 10.643 98827000 0 0 0 5880100 6030500 5595600 7022900 6182600 5537900 7588500 13524000 13836000 2530200 8288900 16809000 26260 3599 23957 221279;221280;221281;221282;221283;221284;221285;221286;221287;221288;221289;221290 176656 176656 1 KDLPLDSENVQK Unmodified 1384.7198 0.71980898 2808 Q5VT06 CEP350 Centrosome-associated protein 350 yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 12.703 12.852 3 0.038699 12273 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 20.463 3.8435 45077000 0 0 0 6706200 4368100 4198400 3975200 3721600 0 3354500 2463400 6722200 2871300 3319900 3375800 26261 2808 23958 221291;221292;221293;221294;221295;221296;221297;221298;221299;221300;221301 176657 176657 1 KDLYANTVLSGGTTMYPGIADR Oxidation (M) 2358.1526 0.15256084 1951;1815 P60709;P63261 ACTB;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed no no 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 74.306 74.396 3 1.726E-10 85777 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 67.864 58.921 58925000 0 0 0 0 7582700 0 7093800 8561900 0 7603400 12514000 15570000 0 0 0 26262 1815;1951 23959 221302;221303;221304;221305;221306;221307 176658;176659;176660;176661;176662 176662 2940 5 KDNDSYVSFYNALLHEGYK Unmodified 2262.0593 0.059312378 204 O14727 APAF1 Apoptotic protease-activating factor 1 yes yes 0 0 1 By MS/MS By matching By matching 10 0 3 1 1 1 82.029 82.162 3 0.024225 95131 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 22.051 12.302 8437900 0 0 0 0 0 3513400 0 0 1808400 0 3116100 0 0 0 0 26263 204 23960 221308;221309;221310 176663 176663 1 KDPATQQAFVFGQNLR Unmodified 1818.9377 0.9376811 4428 Q9H6Z4 RANBP3 Ran-binding protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 1 1 2 70.558 70.656 2;3 6.3246E-30 81261 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 130.47 121.28 126260000 0 0 0 4338300 4622500 13428000 7075100 9461400 6542100 13096000 16668000 17790000 10471000 13255000 9515000 26264 4428 23961 221311;221312;221313;221314;221315;221316;221317;221318;221319;221320;221321;221322;221323 176664;176665;176666;176667;176668;176669;176670;176671;176672;176673;176674 176664 10 KDPQGLGLHFYK Unmodified 1401.7405 0.74048484 533 O75694 NUP155 Nuclear pore complex protein Nup155 yes yes 0 0 1 By MS/MS By matching By MS/MS 10 0 3 1 1 1 54.907 55.04 3 0.016878 62228 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 20.611 15.396 38517000 0 0 0 0 0 27664000 0 3926200 6926900 0 0 0 0 0 0 26265 533 23962 221324;221325;221326 176675;176676 176676 2 KDPSGASNPSADSPLHR Unmodified 1734.8285 0.82852458 1767 P55317 FOXA1 Hepatocyte nuclear factor 3-alpha yes yes 0 0 1 By matching By matching By matching By MS/MS By matching 10 0 5 1 1 1 1 1 23.564 23.959 3 0.014971 24577 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 26.412 16.416 11669000 0 0 0 0 0 0 1549800 0 1419900 0 2046800 4796700 0 0 1855300 26266 1767 23963 221327;221328;221329;221330;221331 176677 176677 1 KDSNELSDSAGEEDSADLK Unmodified 2008.8709 0.87090249 5299 Q9Y6X9 MORC2 MORC family CW-type zinc finger protein 2 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 37.198 32.44 3 0.00063549 42455 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 48.968 36.767 17714000 0 17714000 0 0 0 0 0 0 0 0 0 0 0 0 0 26267 5299 23964 221332;221333 176678;176679 176679 2 KDTETENPPVENTLSPK Unmodified 1897.9269 0.92690122 3974 Q96RS0 TGS1 Trimethylguanosine synthase yes yes 0 0 1 By MS/MS 3 0 1 1 43.665 38.892 3 0.024347 48356 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 25.558 20.184 2603000 0 2603000 0 0 0 0 0 0 0 0 0 0 0 0 0 26268 3974 23965 221334 176680 176680 1 KDVDAAYMNK Unmodified 1153.5438 0.54375887 74;66;58;779;80;53 P04259;CON__P50446;CON__P13647;P13647;CON__O95678;O95678;CON__P02538;P02538;CON__P04259 KRT6B;KRT5;KRT75;KRT6A Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 6A no no 0 0 1 By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 19.064 19.247 2 0.024598 19126 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 108.47 15.931 + 33054000 0 0 0 7897800 1651200 0 1228200 0 0 3360300 3626100 6512300 7548600 1229300 0 26269 779;80;74;53;58;66 23966 221335;221336;221337;221338;221339;221340;221341;221342 176681;176682 176682 0 KDVDEAYMNK Unmodified 1211.5492 0.54923818 67;51 CON__H-INV:HIT000292931;CON__P05787;P05787;CON__Q9H552 KRT8 Keratin, type II cytoskeletal 8 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 2 2 1 19.066 19.302 2;3 0.021051 18499 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.261 51.032 + 42932000 0 0 0 2272100 2781500 0 2363500 2304700 0 3892500 4313700 6080900 8369200 6144100 4409800 26270 51;67 23967 221343;221344;221345;221346;221347;221348;221349;221350;221351;221352;221353;221354 176683;176684;176685;176686;176687 176684 4 KDVDGAYMTK Unmodified 1126.5329 0.53285983 780 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 16.929 17.077 2 3.3763E-41 16439 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 185.33 94.727 + 407830000 0 0 0 34221000 25217000 13408000 18629000 101090000 18042000 23121000 27945000 102340000 31725000 12094000 0 26271 780 23968 221355;221356;221357;221358;221359;221360;221361;221362;221363;221364;221365 176688;176689;176690;176691;176692;176693;176694;176695;176696;176697;176698;176699;176700 176698 11 KDVDGAYMTK Oxidation (M) 1142.5278 0.52777445 780 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 2 2 1 1 2 1 2 2 2 2 2 8.6106 8.7427 2;3 1.81E-09 6963 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 143.5 49.192 + 232500000 0 0 0 31305000 17309000 8132900 6199500 15808000 8236000 10237000 26719000 71550000 23849000 6860100 6293600 26272 780 23968 221366;221367;221368;221369;221370;221371;221372;221373;221374;221375;221376;221377;221378;221379;221380;221381;221382;221383;221384;221385 176701;176702;176703;176704;176705;176706;176707;176708 176703 936 1 KDVDNAYMIK Unmodified 1195.5907 0.59070906 79 CON__P35908v2;P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 33.438 33.622 2;3 0.019073 36811 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 99.688 73.583 + 348150000 0 0 0 39539000 23194000 14499000 16063000 50754000 18017000 25709000 36184000 72707000 27685000 13216000 10585000 26273 79 23969 221386;221387;221388;221389;221390;221391;221392;221393;221394;221395;221396;221397;221398;221399;221400;221401;221402;221403;221404;221405;221406;221407;221408;221409 176709;176710;176711;176712;176713 176710 4 KDVDNAYMIK Oxidation (M) 1211.5856 0.58562368 79 CON__P35908v2;P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 1 1 By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 11 2 1 1 1 1 1 1 1 1 1 24.466 24.625 2;3 0.013002 26320 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 67.207 57.849 + 157160000 0 0 0 71718000 10282000 8472200 9246700 0 7809300 8412100 8322600 19903000 9907800 0 3085900 26274 79 23969 221410;221411;221412;221413;221414;221415;221416;221417;221418;221419;221420 176714;176715 176714 114 0 KDVIELTDDSFDK Unmodified 1523.7355 0.73551862 2496 Q15084 PDIA6 Protein disulfide-isomerase A6 yes yes 0 0 1 By MS/MS 3 0 1 1 68.856 64.195 3 0.0037092 78987 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 67.275 59.551 17946000 0 17946000 0 0 0 0 0 0 0 0 0 0 0 0 0 26275 2496 23970 221421 176716 176716 0 KEAPPMEK Unmodified 928.4688 0.46880301 1915 P62841 RPS15 40S ribosomal protein S15 yes yes 0 0 1 By MS/MS 2 0 1 1 98.283 93.549 1 0.039803 115861 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 38.806 9.4681 41512000 0 41512000 0 0 0 0 0 0 0 0 0 0 0 0 0 26276 1915 23971 221422 176717 176717 0 KEDELGDRSIMFTVQNED Unmodified 2124.9634 0.96336308 2367 Q14116 IL18 Interleukin-18 yes yes 0 0 2 By MS/MS 2 0 1 1 78.222 70.091 3 0.00011716 92146 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.261 64.6 71847000 71847000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26277 2367 23972 221423 176718 176718 0 KEDEVQAIATLIEK Unmodified 1585.8563 0.85630246 3927 Q96MW1 CCDC43 Coiled-coil domain-containing protein 43 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 4.25 3.34 2 1 1 2 1 1 86.196 83.616 3 8.4376E-05 104828 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.797 77.212 53117000 0 38902000 5485200 0 0 0 0 0 0 0 0 0 0 0 8729900 26278 3927 23973 221424;221425;221426;221427 176719;176720;176721;176722 176719 4 KEDGSEVGVGGAQVTGSNTRK Unmodified 2075.0243 0.024323855 2330 Q13618 CUL3 Cullin-3 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.72 2.93 4 21 2 2 1 1 2 2 2 1 2 2 2 2 2 2 23.451 22.98 3;4 2.1135E-127 29473 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 200.27 186.23 178880000 26130000 0 62615000 2293200 3042200 8926700 3923800 5917500 1990300 11202000 8975700 9337400 11330000 9089500 14105000 26279 2330 23974 221428;221429;221430;221431;221432;221433;221434;221435;221436;221437;221438;221439;221440;221441;221442;221443;221444;221445;221446;221447;221448;221449;221450;221451;221452 176723;176724;176725;176726;176727;176728;176729;176730 176727 7 KEDGTFYEFGEDIPEAPER Unmodified 2227.991 0.99095804 366 O43776 NARS Asparagine--tRNA ligase, cytoplasmic yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 77.763 77.997 3 7.629E-05 89649 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.668 51.429 26260000 0 0 0 0 0 0 0 0 0 0 3210200 0 0 0 23050000 26280 366 23975 221453;221454 176731 176731 1 KEDINLSVRK Unmodified 1200.6826 0.68263561 2557 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.31 3.99 6 7 2 3 1 1 1 1 1 1 1 1 28.775 27.343 2;3 0.0030229 40184 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 128.6 71.873 857430000 428180000 16225000 14033000 0 0 57629000 0 38431000 31071000 45267000 0 105050000 55818000 65719000 0 26281 2557 23976 221455;221456;221457;221458;221459;221460;221461;221462;221463;221464;221465;221466;221467 176732;176733;176734;176735;176736;176737;176738;176739;176740;176741;176742;176743;176744 176738 7 KEDLELIMTEMEISR 2 Oxidation (M) 1867.8907 0.89071541 4716 Q9NX55 HYPK Huntingtin-interacting protein K yes yes 0 2 1 By MS/MS 10 0 1 1 68.456 68.751 3 0.00042042 78688 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 46.249 44.369 51193000 0 0 0 0 0 0 0 0 0 0 51193000 0 0 0 0 26282 4716 23977 221468 176745 176745 6105;6106 1 KEDLISAFGTDDQTEICK Unmodified 2068.9623 0.96230045 5146 Q9Y3A5 SBDS Ribosome maturation protein SBDS yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 73.861 72.713 2;3 3.2909E-11 83118 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.203 78.72 550970000 7492100 375620000 19827000 5903400 6178100 17647000 5477600 6276600 10158000 10900000 16662000 17963000 9162500 11347000 30357000 26283 5146 23978 221469;221470;221471;221472;221473;221474;221475;221476;221477;221478;221479;221480;221481;221482;221483;221484 176746;176747;176748;176749;176750;176751;176752;176753;176754;176755;176756;176757;176758;176759;176760;176761 176750 16 KEDLRPSAPQQEGEASK Unmodified 1868.9228 0.9228189 574 O76070 SNCG Gamma-synuclein yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 1 2 1 2 2 2 2 2 19.764 19.969 3;4 2.652E-30 20070 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 89.344 61.254 198270000 0 0 0 21869000 21590000 10077000 15852000 6104900 14466000 7171900 25228000 26576000 19681000 14572000 15082000 26284 574 23979 221485;221486;221487;221488;221489;221490;221491;221492;221493;221494;221495;221496;221497;221498;221499;221500;221501;221502;221503;221504;221505;221506 176762;176763;176764;176765;176766;176767;176768;176769;176770;176771;176772 176770 10 KEDLVFIFWAPESAPLK Unmodified 1989.0612 0.061150279 1165;5088 P23528;Q9Y281 CFL1;CFL2 Cofilin-1;Cofilin-2 no no 0 0 1 By MS/MS By MS/MS By MS/MS 2.29 0.452 5 2 3 3 1 98.726 93.731 3 1.3388E-35 117234 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.227 93.61 686680000 623460000 59935000 3281100 0 0 0 0 0 0 0 0 0 0 0 0 26285 1165;5088 23980 221507;221508;221509;221510;221511;221512;221513 176773;176774;176775;176776;176777;176778;176779;176780;176781 176778 8 KEDLYLK Unmodified 907.50148 0.50148335 980 P13639 EEF2 Elongation factor 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 26.636 25.669 2 0.018424 34751 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.81 57.07 1069100000 39357000 592350000 93673000 13290000 9656400 17996000 17179000 18614000 14273000 14701000 24227000 30210000 14880000 36510000 132190000 26286 980 23981 221514;221515;221516;221517;221518;221519;221520;221521;221522;221523;221524;221525;221526;221527;221528;221529 176782;176783;176784;176785;176786 176782 3 KEDLYLKPIQR Unmodified 1401.798 0.79799972 980 P13639 EEF2 Elongation factor 2 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 43.661 44.005 3 0.016511 47905 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.815 44.342 344280000 0 0 0 0 0 0 22742000 23034000 8920100 15355000 43918000 50687000 0 32306000 147320000 26287 980 23982 221530;221531;221532;221533;221534;221535;221536;221537 176787;176788;176789;176790 176789 4 KEDVGTVVGIDLGTTYSCVGVFK Unmodified 2443.2305 0.23047681 932 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 91.846 86.012 3 3.2711E-05 109855 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.207 62.483 11890000 11890000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26288 932 23983 221538;221539 176791;176792 176792 2 KEEAEVKPEVK Unmodified 1284.6925 0.6925316 547 O75822 EIF3J Eukaryotic translation initiation factor 3 subunit J yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.56 3.62 4 1 11 2 1 2 1 1 1 1 1 1 1 1 1 1 1 12.917 11.965 2;3 9.8381E-08 15362 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 127.42 94.046 387700000 43289000 29452000 96333000 7588300 7288900 14528000 10354000 13571000 8657000 19603000 0 39961000 18948000 26267000 51862000 26289 547 23984 221540;221541;221542;221543;221544;221545;221546;221547;221548;221549;221550;221551;221552;221553;221554;221555 176793;176794;176795;176796;176797 176795 1 KEEAYEFVR Unmodified 1169.5717 0.57168818 2895 Q6N069 NAA16 N-alpha-acetyltransferase 16, NatA auxiliary subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 38.37 38.556 3 0.0016325 41891 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 72.607 37.096 78028000 0 0 0 0 4722800 0 5730400 5212600 0 14239000 21658000 26465000 0 0 0 26290 2895 23985 221556;221557;221558;221559;221560;221561 176798;176799;176800;176801;176802;176803 176803 6 KEEAYEFVRK Unmodified 1297.6667 0.6666512 2895 Q6N069 NAA16 N-alpha-acetyltransferase 16, NatA auxiliary subunit yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 28.531 28.654 3 0.0058796 30924 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 99.973 91.573 630360000 0 0 0 11355000 17647000 0 27488000 45428000 43344000 84139000 136600000 264360000 0 0 0 26291 2895 23986 221562;221563;221564;221565;221566;221567;221568;221569 176804;176805;176806;176807;176808;176809 176805 2 KEEAYELVR Unmodified 1135.5873 0.58733824 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 34.274 34.621 2 0.015517 37483 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 104.2 86.805 1841700000 0 0 0 0 0 0 73525000 85808000 107980000 258250000 624670000 682750000 0 0 8764800 26292 4226 23987 221570;221571;221572;221573;221574;221575;221576 176810;176811;176812;176813 176811 2 KEEAYELVRR Unmodified 1291.6884 0.68844927 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 0 2 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 29.086 29.338 3 0.012709 31615 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 91.584 38.794 972370000 0 0 0 0 1245300 0 52571000 81508000 91743000 147340000 289840000 297590000 0 5137900 5400600 26293 4226 23988 221577;221578;221579;221580;221581;221582;221583;221584;221585 176814;176815;176816;176817;176818;176819 176816 4 KEECPAVR Unmodified 987.48076 0.48076468 838 P07237 P4HB Protein disulfide-isomerase yes yes 0 0 1 By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 7.1901 7.3217 2 0.047549 4747 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 139.88 104.58 76027000 0 0 0 4312300 2245700 0 2578500 3642700 3536700 2955200 18615000 8246400 0 8695100 21199000 26294 838 23989 221586;221587;221588;221589;221590;221591;221592;221593;221594;221595 176820 176820 1 KEECPAVRLITLEEEMTK Unmodified 2175.0915 0.091540484 838 P07237 P4HB Protein disulfide-isomerase yes yes 0 0 2 By MS/MS By MS/MS 2 0.632 1 3 1 3 2 94.892 91.34 3;4 1.4608E-203 95923 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 235.24 221.81 55141000 51808000 3332700 0 0 0 0 0 0 0 0 0 0 0 0 0 26295 838 23990 221596;221597;221598;221599;221600 176821;176822;176823;176824;176825 176823 4 KEECPAVRLITLEEEMTK Oxidation (M) 2191.0865 0.086455106 838 P07237 P4HB Protein disulfide-isomerase yes yes 0 1 2 By MS/MS 1.5 0.5 1 1 2 95.311 93.877 3 8.4067E-13 96341 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 108.75 101.72 46005000 46005000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26296 838 23990 221601;221602 176826;176827 176827 1024 2 KEEDLEDK Unmodified 1004.4662 0.46622005 3633 Q92598 HSPH1 Heat shock protein 105 kDa yes yes 0 0 1 By matching By MS/MS 2.33 0.471 2 1 1 2 7.0675 3.6953 2 7.579E-05 5357 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 196.88 74.38 376540000 30501000 346040000 0 0 0 0 0 0 0 0 0 0 0 0 0 26297 3633 23991 221603;221604;221605 176828;176829;176830 176830 2 KEEDNDEIK Unmodified 1118.5091 0.5091475 4896 Q9UHD1 CHORDC1 Cysteine and histidine-rich domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 6.5538 3.2082 2 3.2791E-17 4714 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 209.73 155.52 433010000 13237000 419770000 0 0 0 0 0 0 0 0 0 0 0 0 0 26298 4896 23992 221606;221607;221608 176831;176832;176833 176832 1 KEEEATEWQHK Unmodified 1413.6525 0.6524577 1345 P35241 RDX Radixin yes yes 0 0 1 By matching By MS/MS 2 0 2 1 1 16.5 13.224 3 0.00049447 16719 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 87.713 69.654 16245000 6806200 0 9439000 0 0 0 0 0 0 0 0 0 0 0 0 26299 1345 23993 221609;221610 176834;176835 176835 2 KEEEDEELDLNK Unmodified 1489.6784 0.67839767 3107 Q7Z5K2 WAPAL Wings apart-like protein homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.6 2.8 1 4 1 1 1 1 1 31.828 31.229 3 3.4191E-07 38371 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 113.77 103.44 36300000 0 8860200 0 0 0 7442900 0 0 3345900 0 0 7999700 0 0 8651600 26300 3107 23994 221611;221612;221613;221614;221615 176836;176837 176837 2 KEEEDLAK Unmodified 960.47639 0.47639081 3659 Q92783 STAM Signal transducing adapter molecule 1 yes yes 0 0 1 By MS/MS 3 0 1 1 7.8511 4.4927 2 0.018749 6129 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 144.09 72.709 63649000 0 63649000 0 0 0 0 0 0 0 0 0 0 0 0 0 26301 3659 23995 221616 176838 176838 1 KEEEEEEEENRMSEEAEK Unmodified 2252.9227 0.92268006 3305 Q8N128 FAM177A1 Protein FAM177A1 yes yes 0 0 2 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 23.841 24.004 3 0.032306 25139 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 37.583 32.003 21039000 0 0 0 0 1021300 1359600 0 2722700 2492000 2727700 4443000 0 3836500 2436000 0 26302 3305 23996 221617;221618;221619;221620;221621;221622;221623;221624 176839 176839 1 KEEEEEETPK Unmodified 1246.5565 0.55649162 1081 P18858 LIG1 DNA ligase 1 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 6.9858 3.6851 2 0.040462 5796 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.067 44.668 11412000 0 11412000 0 0 0 0 0 0 0 0 0 0 0 0 0 26303 1081 23997 221625;221626 176840 176840 1 KEEELQAALAR Unmodified 1256.6725 0.67246486 1356;1366;3090 P35579;Q7Z406;P35749 MYH9;MYH14;MYH11 Myosin-9;Myosin-14;Myosin-11 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 2 2 1 2 39.585 39.759 2;3 1.168E-42 44527 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 202.2 178.77 4995100000 0 0 0 382500000 286610000 433470000 371080000 301600000 289620000 447460000 561090000 657000000 494520000 242270000 527870000 26304 1356;3090;1366 23998 221627;221628;221629;221630;221631;221632;221633;221634;221635;221636;221637;221638;221639;221640;221641;221642;221643;221644;221645;221646;221647;221648;221649 176841;176842;176843;176844;176845;176846;176847;176848;176849;176850;176851;176852;176853;176854;176855;176856;176857;176858;176859;176860;176861;176862;176863;176864;176865;176866 176842 19 KEEELQAALARVEEEAAQK Unmodified 2141.0964 0.096426166 1356 P35579 MYH9 Myosin-9 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS 3.29 2.81 1 3 2 1 4 2 1 88.727 85.521 3;4 3.0925E-147 95516 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 225.69 195.1 506600000 341000000 124360000 0 0 0 0 0 0 0 0 0 0 0 0 41239000 26305 1356 23999 221650;221651;221652;221653;221654;221655;221656 176867;176868;176869;176870;176871;176872;176873;176874;176875 176872 9 KEEGEAFAR Unmodified 1035.4985 0.49852324 1828 P61019 RAB2A Ras-related protein Rab-2A yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.366 12.515 2 0.029415 11137 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 114.89 54.135 99739000 0 0 0 5135900 6002000 4833900 7354200 7047700 6313700 10857000 11061000 9760700 13139000 9580900 8653200 26306 1828 24000 221657;221658;221659;221660;221661;221662;221663;221664;221665;221666;221667;221668 176876 176876 0 KEEGTGTLK Unmodified 961.50803 0.50802529 5201 Q9Y4G6 TLN2 Talin-2 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 6.6139 3.3121 2 0.025066 4769 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 102.55 17.281 33434000 0 33434000 0 0 0 0 0 0 0 0 0 0 0 0 0 26307 5201 24001 221669;221670 176877;176878 176878 2 KEEGVIDSSDK Unmodified 1205.5776 0.57756142 1751 P55010 EIF5 Eukaryotic translation initiation factor 5 yes yes 0 0 1 By MS/MS 3 0 2 2 13.628 10.19 2;3 0.017071 12880 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 78.655 53.096 9015000 0 9015000 0 0 0 0 0 0 0 0 0 0 0 0 0 26308 1751 24002 221671;221672 176879;176880 176880 0 KEEGYGEAAQFDGLK Unmodified 1640.7682 0.76821573 4991 Q9ULC6 PADI1 Protein-arginine deiminase type-1 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 19.727 19.877 3;4 0.0032559 59765 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 40.693 34.488 2928100 0 0 0 0 0 0 0 0 2928100 0 0 0 0 0 0 26309 4991 24003 221673;221674 176881;176882 176882 2 KEEIIAPCK Unmodified 1086.5743 0.57433072 455 O75116 ROCK2 Rho-associated protein kinase 2 yes yes 0 0 1 By MS/MS 3 0 1 1 28.898 24.554 2 0.010286 30697 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 171.56 135.68 11327000 0 11327000 0 0 0 0 0 0 0 0 0 0 0 0 0 26310 455 24004 221675 176883 176883 0 KEEILSSSDICQK Unmodified 1535.7501 0.75012283 1739 P54278 PMS2 Mismatch repair endonuclease PMS2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 39.615 39.742 3 0.024123 44864 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 28.351 24.164 50857000 0 0 0 6008300 3354800 0 6903600 6086400 3772000 7405700 0 7030300 0 0 10296000 26311 1739 24005 221676;221677;221678;221679;221680;221681;221682;221683 176884;176885 176885 2 KEEITGTLRK Unmodified 1173.6717 0.67173657 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 17.179 16.458 3 5.9853E-05 26436 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 124.67 100.58 1249400000 901230000 0 10894000 0 5981500 23752000 14291000 15028000 9083500 30158000 36590000 45106000 37718000 39394000 80131000 26312 5187 24006 221684;221685;221686;221687;221688;221689;221690;221691;221692;221693;221694;221695;221696;221697 176886;176887;176888;176889;176890;176891;176892;176893;176894 176890 3 KEELLNAMVAK Oxidation (M) 1260.6748 0.67477304 1796 P57737 CORO7 Coronin-7 yes yes 0 1 1 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 41.935 37.733 3 0.0051744 47472 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 59.84 37.812 14256000 0 7145300 7110800 0 0 0 0 0 0 0 0 0 0 0 0 26313 1796 24007 221698;221699 176895;176896 176896 2915 0 KEELTLEGIK Unmodified 1158.6496 0.64960415 2396 Q14240 EIF4A2 Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed yes yes 0 0 1 By MS/MS 2.67 0.471 1 2 3 58.226 53.053 2;3 1.1071E-15 65498 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 211.78 142.35 163690000 0 163690000 0 0 0 0 0 0 0 0 0 0 0 0 0 26314 2396 24008 221700;221701;221702 176897;176898;176899 176898 2 KEELTLEGIR Unmodified 1186.6558 0.65575216 1816 P60842 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 35 2 2 3 3 3 4 3 3 3 3 3 3 52.426 52.614 2;3 0.0002067 59241 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 104.43 45.735 2251100000 0 0 0 70677000 49787000 294900000 120160000 130660000 81965000 266100000 206150000 227520000 184920000 180970000 437280000 26315 1816 24009 221703;221704;221705;221706;221707;221708;221709;221710;221711;221712;221713;221714;221715;221716;221717;221718;221719;221720;221721;221722;221723;221724;221725;221726;221727;221728;221729;221730;221731;221732;221733;221734;221735;221736;221737 176900;176901;176902;176903;176904;176905;176906;176907;176908;176909;176910;176911;176912;176913;176914;176915;176916;176917 176901 12 KEELVAEQALK Unmodified 1256.6976 0.69761697 5280 Q9Y6E2 BZW2 Basic leucine zipper and W2 domain-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.86 3.48 1 10 5 42 5 7 4 3 3 4 3 3 3 4 4 4 4 3 4 41.191 40.11 2;3 6.4094E-181 49570 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 261.35 0 4864400000 165440000 2462000000 95576000 89416000 105790000 233520000 118330000 119250000 104010000 230380000 233660000 236180000 191830000 121780000 357290000 26316 5280 24010 221738;221739;221740;221741;221742;221743;221744;221745;221746;221747;221748;221749;221750;221751;221752;221753;221754;221755;221756;221757;221758;221759;221760;221761;221762;221763;221764;221765;221766;221767;221768;221769;221770;221771;221772;221773;221774;221775;221776;221777;221778;221779;221780;221781;221782;221783;221784;221785;221786;221787;221788;221789;221790;221791;221792;221793;221794;221795 176918;176919;176920;176921;176922;176923;176924;176925;176926;176927;176928;176929;176930;176931;176932;176933;176934;176935;176936;176937;176938;176939;176940;176941;176942;176943;176944;176945;176946;176947;176948;176949;176950;176951;176952;176953;176954;176955;176956;176957;176958;176959;176960;176961;176962;176963;176964;176965;176966;176967;176968 176927 28 KEELVPSEEDFQGITPGAQGPSSR Unmodified 2557.2296 0.22962518 463 O75150 RNF40 E3 ubiquitin-protein ligase BRE1B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.667 73.731 3 5.1329E-22 84520 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.573 81.297 295700000 0 0 0 12788000 16437000 26121000 12946000 28565000 18862000 24083000 30581000 28837000 29543000 23974000 42966000 26317 463 24011 221796;221797;221798;221799;221800;221801;221802;221803;221804;221805;221806;221807 176969;176970;176971;176972;176973;176974;176975;176976;176977;176978;176979;176980;176981;176982;176983;176984 176973 16 KEEMPATK Unmodified 932.46372 0.46371763 1600 P49790 NUP153 Nuclear pore complex protein Nup153 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 9.114 5.8054 2 0.021123 8319 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.35 87.002 77872000 0 77872000 0 0 0 0 0 0 0 0 0 0 0 0 0 26318 1600 24012 221808;221809 176985;176986 176985 1 KEENLADWYSQVITK Unmodified 1822.9101 0.91012895 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.92 3.89 5 8 1 2 2 1 1 1 1 1 1 2 83.333 81.683 2;3 0.00010211 94121 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.643 64.304 301970000 28466000 189560000 21447000 0 0 4861200 0 4606700 2970500 5790500 0 4041500 0 3555000 36671000 26319 848 24013 221810;221811;221812;221813;221814;221815;221816;221817;221818;221819;221820;221821;221822 176987;176988;176989;176990;176991;176992;176993;176994;176995;176996;176997 176991 10 KEEPPPSRVPR Unmodified 1290.7044 0.70443369 3944 Q96P48 ARAP1 Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 13.119 13.444 3 0.014328 12011 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 62.466 45.524 11960000 0 0 0 0 0 0 0 0 0 0 0 0 0 4356300 7604000 26320 3944 24014 221823;221824;221825 176998;176999 176999 1 KEEPQELLQSQDFVGEK Unmodified 2002.9848 0.98475045 636 O95260 ATE1 Arginyl-tRNA--protein transferase 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS 3.8 3.12 3 1 1 1 2 1 1 73.165 69.203 3 0.00010277 87746 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.548 65.449 76472000 10667000 57847000 4046300 0 0 0 0 0 0 0 3911500 0 0 0 0 26321 636 24015 221826;221827;221828;221829;221830 177000;177001;177002;177003;177004 177000 4 KEEQVIQVWNK Unmodified 1399.746 0.74596415 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 52.879 51.023 3 0.0051104 56988 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 44.564 13.74 12878000 0 0 2357600 0 0 0 0 10520000 0 0 0 0 0 0 0 26322 5216 24016 221831;221832;221833 177005;177006;177007 177005 3 KEESFVCEHPSK Unmodified 1475.6715 0.67147858 3389 Q8NB91 FANCB Fanconi anemia group B protein yes yes 0 0 1 By MS/MS 2 0 1 1 21.764 18.961 3 0.018677 24126 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 32.933 20.664 6222000 0 0 6222000 0 0 0 0 0 0 0 0 0 0 0 0 26323 3389 24017 221834 177008 177008 1 KEESHSNDQSPQIR Unmodified 1653.7707 0.77067535 4505 Q9HC35 EML4 Echinoderm microtubule-associated protein-like 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.67 1.6 1 23 1 1 2 2 2 2 2 2 2 2 2 2 2 7.8472 7.8863 3;4 2.3076E-08 5725 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 94.551 86.796 193780000 0 0 10974000 4498900 4775400 5439900 6324000 6989000 7858400 11993000 51718000 25235000 15213000 16629000 26133000 26324 4505 24018 221835;221836;221837;221838;221839;221840;221841;221842;221843;221844;221845;221846;221847;221848;221849;221850;221851;221852;221853;221854;221855;221856;221857;221858 177009;177010;177011;177012;177013;177014;177015;177016;177017;177018;177019;177020;177021;177022;177023 177010 14 KEESTEEVK Unmodified 1077.519 0.51898391 5269 Q9Y680 FKBP7 Peptidyl-prolyl cis-trans isomerase FKBP7 yes yes 0 0 1 By matching By MS/MS 2.33 0.471 2 1 1 2 5.5952 2.2688 2 3.6023E-31 4285 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 209.6 121.57 85800000 8542500 77258000 0 0 0 0 0 0 0 0 0 0 0 0 0 26325 5269 24019 221859;221860;221861 177024;177025 177024 2 KEETQPPVALK Unmodified 1238.6871 0.68705229 3405 Q8NC51 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 6 2 24 2 4 2 2 2 2 2 2 2 2 2 2 2 2 2 32.725 31.652 2;3 2.2667E-157 42122 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 280.55 190.67 2191300000 78418000 912530000 29261000 62185000 59206000 88668000 77858000 61374000 74545000 91379000 131990000 172630000 110060000 100520000 140640000 26326 3405 24020 221862;221863;221864;221865;221866;221867;221868;221869;221870;221871;221872;221873;221874;221875;221876;221877;221878;221879;221880;221881;221882;221883;221884;221885;221886;221887;221888;221889;221890;221891;221892;221893 177026;177027;177028;177029;177030;177031;177032;177033;177034;177035;177036;177037;177038;177039;177040;177041;177042;177043;177044;177045;177046;177047;177048;177049;177050 177034 21 KEETQPPVALKK Unmodified 1366.782 0.78201531 3405 Q8NC51 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 23.471 22.862 3 0.0004172 30513 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 74.237 63.675 220460000 34214000 0 40967000 12920000 9896600 0 13168000 12343000 3645200 0 22800000 31449000 0 13481000 25573000 26327 3405 24021 221894;221895;221896;221897;221898;221899;221900;221901;221902;221903;221904 177051;177052;177053;177054;177055;177056 177054 0 KEFSLEEIYTNK Unmodified 1499.7508 0.75077476 2800 Q5THK1 PRR14L Protein PRR14L no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.25 21.454 3 0.031517 22213 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 27.862 19.462 102320000 0 0 0 5468600 6492200 9708300 11488000 6978700 10754000 4566300 13704000 7965500 7144600 10762000 7285300 26328 2800 24022 221905;221906;221907;221908;221909;221910;221911;221912;221913;221914;221915;221916 177057 177057 1 KEGDLIAAQAR Unmodified 1170.6357 0.63568542 757 P02545 LMNA Prelamin-A/C;Lamin-A/C yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 26.695 27.083 3 0.023085 29150 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 31.722 17.487 54926000 0 0 0 0 0 4613800 0 0 0 6690800 16983000 12247000 0 9315900 5074800 26329 757 24023 221917;221918;221919;221920;221921;221922 177058;177059 177058 2 KEGDLIAAQARLK Unmodified 1411.8147 0.81471242 757 P02545 LMNA Prelamin-A/C;Lamin-A/C yes yes 0 0 2 By MS/MS 2 0 1 1 52.363 44.348 3 0.017805 61263 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.398 44.218 44051000 44051000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26330 757 24024 221923 177060 177060 0 KEGEEEEENTEEPPQGEEEESMETQE Unmodified 3051.1782 0.17823864 2206 Q12905 ILF2 Interleukin enhancer-binding factor 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 5.5 4.5 2 2 1 1 1 1 73.601 75.027 3 4.2299E-31 98953 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 103.29 97.856 44950000 16266000 20120000 0 0 4009400 4555000 0 0 0 0 0 0 0 0 0 26331 2206 24025 221924;221925;221926;221927 177061;177062;177063;177064 177063 4 KEGEEEEENTEEPPQGEEEESMETQE Oxidation (M) 3067.1732 0.17315326 2206 Q12905 ILF2 Interleukin enhancer-binding factor 2 yes yes 0 1 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.2 3.6 1 4 1 1 1 1 1 46.807 48.101 3 9.182E-26 91619 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 93.966 93.966 48805000 27863000 0 0 2455600 0 0 0 0 0 2578400 0 8163600 0 0 7744300 26332 2206 24025 221928;221929;221930;221931;221932 177065;177066;177067 177066 3588 3 KEGEEQPVLPEETESSK Unmodified 1914.9058 0.90583143 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.86 3.4 1 1 5 2 1 1 1 1 1 38.051 36.847 3 9.1742E-05 47666 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.902 63.193 73770000 0 26757000 0 4505000 0 0 0 0 0 0 13801000 0 9162200 7573800 11971000 26333 619 24026 221933;221934;221935;221936;221937;221938;221939 177068;177069;177070;177071;177072;177073;177074 177069 7 KEGEEQPVLPEETESSKPGPSAHDLAAQLK Unmodified 3200.5837 0.58371601 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 0 2 By MS/MS 2 0 1 1 67.697 63.974 4 0.048486 79150 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 15.813 10.326 9551200 0 0 9551200 0 0 0 0 0 0 0 0 0 0 0 0 26334 619 24027 221940 177075 177075 1 KEGITGPPADSSKPIGPDDAIDALSSDFTCGSPTAAGK Unmodified 3729.768 0.76796432 1113 P20810 CAST Calpastatin yes yes 0 0 2 By MS/MS 2 0 1 1 86.427 83.994 4 0.021131 101639 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 17.119 15.555 3929400 0 0 3929400 0 0 0 0 0 0 0 0 0 0 0 0 26335 1113 24028 221941 177076 177076 1 KEGPYDVVVLPGGNLGAQNLSESAAVK Unmodified 2711.413 0.41300928 4015 Q99497 PARK7 Protein deglycase DJ-1 yes yes 0 0 1 By MS/MS By MS/MS 6.5 3.5 1 1 1 1 83.322 81.806 3 6.3025E-16 94466 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.08 54.618 15951000 0 6815600 0 0 0 0 0 0 0 0 0 0 0 0 9135800 26336 4015 24029 221942;221943 177077;177078;177079 177077 3 KEIGVQNHDK Unmodified 1166.6044 0.60438529 2675 Q3T8J9 GON4L GON-4-like protein yes yes 0 0 1 By MS/MS 3 0 1 1 20.91 17.083 3 0.036665 21382 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 37.344 0 928370 0 928370 0 0 0 0 0 0 0 0 0 0 0 0 0 26337 2675 24030 221944 177080 177080 0 KELLPNK Unmodified 840.5069 0.50690308 4826 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 81.536 80.821 1 0.0097423 98335 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.616 43.723 56010000 0 22368000 0 0 2321200 0 7077000 11271000 8347500 0 0 4625100 0 0 0 26338 4826 24031 221945;221946;221947;221948;221949;221950 177081;177082;177083 177082 0 KENLEIQTSTVGGAEER Unmodified 1859.9225 0.92248455 5315 yes yes 0 0 1 By matching By MS/MS 10 0 3 1 2 36.127 36.196 3 0.027186 39880 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 14.959 3.6795 + 11423000 0 0 0 2135700 0 0 0 0 0 0 0 0 9287800 0 0 26339 5315 24032 221951;221952;221953 177084 177084 1 KENPLQFK Unmodified 1002.5498 0.54983053 1017;1345 P35241;P15311 RDX;EZR Radixin;Ezrin no no 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 40.518 35.406 2 0.013002 49598 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 171.73 127.04 40739000 31297000 0 9441900 0 0 0 0 0 0 0 0 0 0 0 0 26340 1345;1017 24033 221954;221955 177085;177086 177085 1 KEPAVLELEGK Unmodified 1211.6762 0.67615325 2055 Q01518 CAP1 Adenylyl cyclase-associated protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.55 3.56 6 4 21 4 4 2 2 2 2 2 2 1 1 2 2 1 2 2 51.806 50.091 2;3 0.00012261 56050 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 72.34 62.694 2186500000 156240000 855030000 686370000 40340000 13571000 53062000 37384000 29764000 16714000 12375000 48324000 55936000 11100000 36634000 133690000 26341 2055 24034 221956;221957;221958;221959;221960;221961;221962;221963;221964;221965;221966;221967;221968;221969;221970;221971;221972;221973;221974;221975;221976;221977;221978;221979;221980;221981;221982;221983;221984;221985;221986 177087;177088;177089;177090;177091;177092;177093;177094;177095;177096;177097;177098;177099;177100;177101;177102;177103;177104;177105;177106;177107;177108;177109;177110;177111;177112;177113;177114;177115 177089 22 KEPEVTVVSQPTEPQPVLIPSININSDSGENK Unmodified 3444.7624 0.76240866 4365 Q9H2G2 SLK STE20-like serine/threonine-protein kinase yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 88.307 84.653 3 0.0083212 105352 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 21.21 16.678 23464000 0 20290000 3173300 0 0 0 0 0 0 0 0 0 0 0 0 26342 4365 24035 221987;221988 177116 177116 1 KEPGGGAATEEGVNR Unmodified 1470.7063 0.70628418 3859 Q96GX5 MASTL Serine/threonine-protein kinase greatwall yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.433 12.583 3 0.00041401 11870 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 40.372 26.595 63606000 0 0 0 4010900 5226700 6880900 4154100 4540700 4884100 6240800 3735500 8015000 5252500 4019600 6645700 26343 3859 24036 221989;221990;221991;221992;221993;221994;221995;221996;221997;221998;221999;222000 177117;177118;177119;177120;177121;177122;177123;177124;177125;177126;177127;177128;177129;177130;177131 177119 15 KEPGGGGGGGGGGGGGGGGVSSEK Unmodified 1814.8143 0.81433108 3833 Q96F45 ZNF503 Zinc finger protein 503 yes yes 0 0 1 By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 6.041 6.2071 3 0.011372 3389 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 19.975 13.813 13202000 0 0 0 1075000 0 0 0 1416300 953160 1581000 1989100 1531400 1508900 1227200 1920000 26344 3833 24037 222001;222002;222003;222004;222005;222006;222007;222008;222009 177132 177132 1 KEPIQPETPQPK Unmodified 1390.7456 0.7456298 1583 P49643 PRIM2 DNA primase large subunit yes yes 0 0 1 By MS/MS By matching 2.33 0.471 2 1 2 1 31.867 27.81 3 0.0067414 36646 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 39.267 24.45 34061000 0 32968000 1093400 0 0 0 0 0 0 0 0 0 0 0 0 26345 1583 24038 222010;222011;222012 177133;177134;177135 177133 3 KEPVGDDESVPENVLSFDDLTADALANLK Unmodified 3100.5088 0.50881974 1580 P49591 SARS Serine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 98.023 95.142 3 2.0734E-23 115451 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 86.577 81.957 15705000 0 3702700 12002000 0 0 0 0 0 0 0 0 0 0 0 0 26346 1580 24039 222013;222014 177136;177137 177137 2 KESYSVYVYK Unmodified 1264.634 0.63395408 432 Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;P57053;O60814 HIST1H2BL;HIST1H2BM;HIST1H2BN;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;H2BFS;HIST1H2BK Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 2 1 1 1 1 1 1 42.095 42.148 2 0.020653 47919 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 82.749 59.678 42268000 0 0 0 9132100 2698500 0 0 0 0 9830500 6638800 0 3832200 4074800 6061000 26347 432 24040 222015;222016;222017;222018;222019;222020;222021;222022 177138;177139 177139 2 KETAEMADRNK Unmodified 1291.619 0.61904908 3025 Q70E73 RAPH1 Ras-associated and pleckstrin homology domains-containing protein 1 yes yes 0 0 2 By MS/MS 2 0 1 1 5.9684 3.7509 3 0.019757 5449 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 58.829 43.289 16554000 0 0 16554000 0 0 0 0 0 0 0 0 0 0 0 0 26348 3025 24041 222023 177140 177140 1 KETARPSCEIVDGTR Unmodified 1717.8417 0.8417318 3615 Q92538 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 0 0 2 By MS/MS 10 0 1 1 23.527 23.877 3 0.0397 25108 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 30.133 11.721 3475400 0 0 0 0 0 0 0 0 0 0 0 0 3475400 0 0 26349 3615 24042 222024 177141 177141 0 KETEGDVTSVK Unmodified 1191.5983 0.59829686 1641 P50990 CCT8 T-complex protein 1 subunit theta yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.54 3 3 2 21 1 4 2 2 2 2 2 2 2 2 2 2 1 11.947 11.353 2;3 1.3294E-08 14372 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 133.89 91.784 292970000 8165500 234660000 0 3289500 2995800 4106100 3816300 2783500 2533100 5500500 0 6712200 6380200 6653200 5370900 26350 1641 24043 222025;222026;222027;222028;222029;222030;222031;222032;222033;222034;222035;222036;222037;222038;222039;222040;222041;222042;222043;222044;222045;222046;222047;222048;222049;222050 177142;177143;177144;177145;177146;177147;177148;177149 177142 6 KETSFGSSENITMTSLSK Unmodified 1945.9303 0.93027204 5023 Q9UMZ2 SYNRG Synergin gamma yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.34 48.501 3 0.044634 54304 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 19.036 14.326 628430000 0 0 0 31986000 24848000 86313000 22537000 22311000 67302000 63964000 61778000 87447000 50200000 34860000 74889000 26351 5023 24044 222051;222052;222053;222054;222055;222056;222057;222058;222059;222060;222061;222062 177150 177150 1 KEVDMMK 2 Oxidation (M) 911.40924 0.40923922 579 O94760 DDAH1 N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 yes yes 0 2 1 By MS/MS 2 0 1 1 21.337 16.518 2 0.044777 23743 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.103 10.954 15979000 15979000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26352 579 24045 222063 177151 177151 0 KEVVEEAENGR Unmodified 1258.6153 0.61534391 821 P06454 PTMA Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 1 2 2 1 2 2 2 2 2 2 13.15 13.313 2;3 0.0012657 12587 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 62.705 40.064 123910000 0 0 0 6221400 6472900 1324800 9805000 9448100 1747800 6184500 22604000 12628000 11943000 9186900 26346000 26353 821 24046 222064;222065;222066;222067;222068;222069;222070;222071;222072;222073;222074;222075;222076;222077;222078;222079;222080;222081;222082;222083;222084;222085 177152;177153;177154;177155;177156;177157;177158;177159;177160;177161;177162 177152 10 KFAEALGSTEAK Unmodified 1250.6507 0.65066678 1977 P78347 GTF2I General transcription factor II-I yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 31.152 30.8 3 0.015541 33383 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 24.964 16.165 104950000 12294000 0 0 1460400 0 0 8561300 8493700 3888800 11249000 8065900 15226000 12130000 8912500 14673000 26354 1977 24047 222086;222087;222088;222089;222090;222091;222092;222093;222094;222095;222096 177163;177164;177165 177164 3 KFAETQPK Unmodified 947.50763 0.50763136 1211 P26641 EEF1G Elongation factor 1-gamma yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 12.083 8.9593 2 0.0164 14038 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 118.32 71.899 282070000 258230000 0 23836000 0 0 0 0 0 0 0 0 0 0 0 0 26355 1211 24048 222097;222098 177166 177166 1 KFDADPVELFEIPVK Unmodified 1745.924 0.9239881 4545 Q9NPB8 GPCPD1 Glycerophosphocholine phosphodiesterase GPCPD1 yes yes 0 0 1 By MS/MS 2 0 1 1 96.877 88.747 3 0.00039245 114647 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.594 59.522 5763300 5763300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26356 4545 24049 222099 177167 177167 1 KFDDENFILK Unmodified 1267.6449 0.64485312 5038 Q9UNP9 PPIE Peptidyl-prolyl cis-trans isomerase E yes yes 0 0 1 By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 66.935 66.189 3 0.0023542 83446 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 66.19 40.804 57040000 11235000 0 10584000 0 1325800 2340000 1349100 2540200 1678600 2423400 2504100 4428700 2636200 4589900 9404200 26357 5038 24050 222100;222101;222102;222103;222104;222105;222106;222107;222108;222109;222110;222111;222112 177168;177169 177169 2 KFDDFQK Unmodified 926.44978 0.44978213 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.67 0.471 1 2 1 1 1 27.801 23.719 2 0.038528 29839 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 124.83 78.483 181020000 619620 51260000 129140000 0 0 0 0 0 0 0 0 0 0 0 0 26358 2344 24051 222113;222114;222115 177170;177171 177170 0 KFDEALK Unmodified 849.45962 0.45961853 861 P08237 PFKM ATP-dependent 6-phosphofructokinase, muscle type yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 21.598 20.982 2 0.01495 26736 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 159.2 72.685 591570000 0 0 334410000 0 0 77524000 0 0 64858000 0 0 0 0 114780000 0 26359 861 24052 222116;222117;222118;222119 177172;177173;177174;177175 177174 1 KFDEGRNNFEGEVTK Unmodified 1768.838 0.83802663 838 P07237 P4HB Protein disulfide-isomerase yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.25 3.75 6 1 13 3 1 3 1 1 1 1 1 1 1 1 1 1 1 2 37.182 35.549 3;4 1.8661E-37 45485 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 116.78 86.799 1366600000 313810000 4856000 253940000 21310000 17877000 31711000 39389000 29320000 30101000 41399000 98061000 111380000 43086000 90549000 239840000 26360 838 24053 222120;222121;222122;222123;222124;222125;222126;222127;222128;222129;222130;222131;222132;222133;222134;222135;222136;222137;222138;222139 177176;177177;177178;177179;177180;177181;177182;177183;177184;177185;177186;177187;177188;177189 177185 10 KFDPMGQQTCSAHPAR Unmodified 1829.8301 0.83012126 4548 Q9NPE3 NOP10 H/ACA ribonucleoprotein complex subunit 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 29.816 30.053 4 0.0027246 32545 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 29.58 25.478 114920000 0 0 0 0 4843400 7161900 6425600 8470300 7649700 8970800 11572000 6622000 12942000 18479000 21782000 26361 4548 24054 222140;222141;222142;222143;222144;222145;222146;222147;222148;222149;222150 177190;177191;177192;177193;177194;177195 177192 6 KFDQLLAEEK Unmodified 1219.6449 0.64485312 1356;1357;1366;3090 P35579;Q7Z406;P35580;P35749 MYH9;MYH14;MYH10;MYH11 Myosin-9;Myosin-14;Myosin-10;Myosin-11 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.58 3.65 10 1 25 4 4 3 2 2 2 2 2 2 2 2 2 2 3 2 49.998 48.874 2;3 3.5143E-41 54547 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 185.08 103.53 10132000000 98258000 184440000 379060000 535990000 448070000 1004300000 531750000 547640000 534660000 893870000 919580000 1352300000 1238200000 592250000 871990000 26362 1356;3090;1357;1366 24055 222151;222152;222153;222154;222155;222156;222157;222158;222159;222160;222161;222162;222163;222164;222165;222166;222167;222168;222169;222170;222171;222172;222173;222174;222175;222176;222177;222178;222179;222180;222181;222182;222183;222184;222185;222186 177196;177197;177198;177199;177200;177201;177202;177203;177204;177205;177206;177207;177208;177209;177210;177211;177212;177213;177214;177215;177216;177217;177218;177219;177220;177221;177222;177223;177224;177225;177226;177227;177228 177216 17 KFEDEYSEYLK Unmodified 1449.6664 0.66637643 4366 Q9H2H8 PPIL3 Peptidyl-prolyl cis-trans isomerase-like 3 yes yes 0 0 1 By MS/MS By matching By MS/MS 5.4 3.77 2 1 2 3 1 1 64.931 61.819 2;3 4.3689E-16 79849 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 196.11 160.57 86821000 0 75078000 0 0 0 0 0 0 0 0 2288200 0 0 0 9455300 26363 4366 24056 222187;222188;222189;222190;222191 177229;177230;177231;177232;177233 177230 5 KFEDINQEFVK Unmodified 1395.7034 0.70343063 4264 Q9BZF9 UACA Uveal autoantigen with coiled-coil domains and ankyrin repeats yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.45 1 6 1 1 1 1 1 1 1 56.828 56.19 3 0.0083072 63486 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 40.516 31.561 24427000 0 3074700 0 0 0 4707600 3726500 3588800 0 0 5939200 0 3389700 0 0 26364 4264 24057 222192;222193;222194;222195;222196;222197;222198 177234;177235;177236;177237;177238 177237 4 KFEEFQTDMAAHEER Unmodified 1866.8207 0.82066201 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS 10 0 1 1 46.277 47.014 3 6.8138E-05 51917 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.685 66.499 8112200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8112200 26365 2344 24058 222199 177239 177239 1 KFEEFQTDMAAHEERVNEVNQFAAK Unmodified 2967.3821 0.38211985 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 2 By MS/MS 2 0 1 1 76.165 68.034 4 5.0382E-18 89789 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.297 70.393 12691000 12691000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26366 2344 24059 222200 177240 177240 1 KFEESIHDVAFHPSK Unmodified 1769.8737 0.87368386 371 O43815 STRN Striatin yes yes 0 0 1 By MS/MS By matching By MS/MS 10 0 3 1 1 1 47.695 48.263 4 0.00033569 53144 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.711 27.735 31904000 0 0 0 0 0 0 0 0 0 0 0 6704900 0 5181300 20018000 26367 371 24060 222201;222202;222203 177241 177241 1 KFFEMVNTITEEK Unmodified 1614.7963 0.79634474 4044 Q99683 MAP3K5 Mitogen-activated protein kinase kinase kinase 5 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 10.94 11.016 4 0.014704 8786 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 27.862 0 10146000 0 0 0 3029000 724040 1049100 0 1493200 0 1039500 0 1522600 0 1288200 0 26368 4044 24061 222204;222205;222206;222207;222208;222209;222210 177242 177242 1 KFGDMSYSIR Unmodified 1202.5754 0.57539335 2642 Q16890 TPD52L1 Tumor protein D53 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 50.787 51.287 3 0.014089 57438 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 38.875 25.669 19487000 0 0 0 0 0 0 0 0 0 0 0 12152000 7334900 0 0 26369 2642 24062 222211;222212;222213 177243;177244;177245 177245 2 KFGDPVVQSDMK Unmodified 1349.6649 0.66493664 908 P0DMV9;P0DMV8 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 0 0 1 By MS/MS By MS/MS 10 0 3 2 1 41.497 42.051 3 0.0383 46260 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 18.203 13.859 16564000 0 0 0 0 0 0 0 0 0 0 8410900 0 0 0 8153300 26370 908 24063 222214;222215;222216 177246;177247 177246 2 KFGNSEFDPPGPNVATTTVSDDVSMTFITSK Unmodified 3288.5496 0.54963869 546 O75821 EIF3G Eukaryotic translation initiation factor 3 subunit G yes yes 0 0 1 By MS/MS 2 0 1 1 93.004 84.873 3 3.4869E-44 109951 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.6 90.792 23781000 23781000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26371 546 24064 222217 177248 177248 1 KFGPVVAPK Unmodified 941.56984 0.56983769 2595 Q15942 ZYX Zyxin yes yes 0 0 1 By MS/MS 2 0 1 1 44.141 37.275 2 0.040224 51299 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.142 78.269 10547000 10547000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26372 2595 24065 222218 177249 177249 0 KFGTINIVHPK Unmodified 1252.7292 0.72919187 5261 Q9Y617 PSAT1 Phosphoserine aminotransferase yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 46.334 46.876 3 0.014724 51164 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 28.382 22.349 30482000 0 0 0 0 0 0 0 0 0 0 3785100 6437900 0 4893700 15365000 26373 5261 24066 222219;222220;222221;222222 177250;177251 177250 2 KFGVLSDNFK Unmodified 1153.6132 0.61315906 2124 Q06203 PPAT Amidophosphoribosyltransferase yes yes 0 0 1 By MS/MS 2 0 1 1 70.151 61.865 3 0.044379 82431 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 38.804 26.758 5969800 5969800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26374 2124 24067 222223 177252 177252 1 KFPASNISVNDATSSEEK Unmodified 1922.9222 0.92215019 2097 Q03468 ERCC6 DNA excision repair protein ERCC-6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.687 48.846 3 1.6086E-06 55172 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 41.912 40.051 161680000 0 0 0 9191600 10139000 13128000 11498000 7965100 8725800 12148000 14539000 19345000 19221000 11324000 24459000 26375 2097 24068 222224;222225;222226;222227;222228;222229;222230;222231;222232;222233;222234;222235 177253;177254;177255;177256;177257;177258;177259;177260;177261;177262;177263;177264;177265;177266;177267;177268 177255 16 KFPGSAALVGAVR Unmodified 1271.735 0.73500553 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 61.902 62.259 3 0.0038546 70685 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 28.433 21.512 19649000 0 0 0 0 0 0 0 0 0 0 0 7240600 4468500 2528400 5411600 26376 4139 24069 222236;222237;222238;222239 177269;177270;177271;177272 177272 4 KFPVTENSK Unmodified 1048.5553 0.55530983 1481 P43490 NAMPT Nicotinamide phosphoribosyltransferase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 19.379 18.848 2 0.0025468 27855 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 120.87 86.163 1081500000 885420000 0 123770000 0 0 4986400 5541800 4276600 4068600 7220600 9339700 0 5378400 6990400 24483000 26377 1481 24070 222240;222241;222242;222243;222244;222245;222246;222247;222248;222249;222250 177273;177274;177275;177276;177277 177276 2 KFTEDFGQEG Unmodified 1156.5037 0.50366819 484 O75351 VPS4B Vacuolar protein sorting-associated protein 4B yes yes 0 0 1 By MS/MS 3 0 1 1 46.348 41.489 2 0.017271 51494 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 87.639 77.653 25028000 0 25028000 0 0 0 0 0 0 0 0 0 0 0 0 0 26378 484 24071 222251 177278 177278 1 KFTNSLTTVGSNK Unmodified 1395.7358 0.73579339 3239 Q8IWE2 FAM114A1 Protein NOXP20 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 2 3 1 2 1 1 2 2 2 1 1 2 34.586 34.735 2;3 0.015826 38554 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 47.31 37.258 542890000 0 0 0 21622000 18795000 21055000 25876000 24902000 22401000 57186000 60274000 79950000 69155000 39629000 102040000 26379 3239 24072 222252;222253;222254;222255;222256;222257;222258;222259;222260;222261;222262;222263;222264;222265;222266;222267;222268;222269;222270;222271 177279;177280;177281 177279 2 KFTQVLEDDEK Unmodified 1350.6667 0.66671078 4633 Q9NTI5 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes yes 0 0 1 By MS/MS 2 0 1 1 43.409 39.687 3 0.0014918 50228 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 66.267 43.349 10347000 0 0 10347000 0 0 0 0 0 0 0 0 0 0 0 0 26380 4633 24073 222272 177282 177282 1 KFTTDDSICVLGISK Unmodified 1682.8549 0.85492225 2064 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 5.2 3.92 3 2 2 1 1 1 76.797 73.129 2;3 6.0546E-22 94754 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 128.71 107.41 173060000 95777000 0 5636500 0 0 0 0 0 0 0 24262000 0 0 0 47384000 26381 2064 24074 222273;222274;222275;222276;222277 177283;177284;177285;177286;177287 177284 3 KFVEEQHTK Unmodified 1144.5877 0.58767259 3732 Q96A49 SYAP1 Synapse-associated protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 8.8432 5.7576 3 0.016479 7298 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 57.267 45.905 437060000 402040000 18496000 16526000 0 0 0 0 0 0 0 0 0 0 0 0 26382 3732 24075 222278;222279;222280 177288;177289 177289 1 KFVETPGQK Unmodified 1032.5604 0.56039521 811 P05455 SSB Lupus La protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 23.257 19.289 2 1.035E-05 27373 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 175.91 110.24 425920000 375550000 25837000 24534000 0 0 0 0 0 0 0 0 0 0 0 0 26383 811 24076 222281;222282;222283 177290;177291;177292 177291 2 KFVLCPECENPETDLHVNPK Unmodified 2425.1406 0.14061594 1751 P55010 EIF5 Eukaryotic translation initiation factor 5 yes yes 0 0 1 By MS/MS 2 0 1 1 77.38 69.25 4 0.031645 91264 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 21.1 14.841 7835600 7835600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26384 1751 24077 222284 177293 177293 0 KFVTDSNAVVQLK Unmodified 1447.8035 0.80347903 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 1 By MS/MS 2 0 1 1 65.925 57.63 3 0.0045553 77389 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.098 39.908 7737500 7737500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26385 2361 24078 222285 177294 177294 0 KFYEQFSK Unmodified 1075.5338 0.53384611 850 P07900 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 0 0 1 By MS/MS 2 0 1 1 43.213 36.42 2 0.044922 50164 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 99.139 63.89 14321000 14321000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26386 850 24079 222286 177295 177295 1 KFYPLEIDYGQDEEAVK Unmodified 2042.9837 0.98368782 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 0 1 By MS/MS 2 0 1 1 83.541 75.411 3 0.047092 98525 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 26.837 22.138 28490000 28490000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26387 894 24080 222287 177296 177296 0 KGDDLLETNNPEPEK Unmodified 1697.8108 0.81080883 3974 Q96RS0 TGS1 Trimethylguanosine synthase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.56 1 1 13 2 1 1 1 1 1 1 1 1 1 1 2 1 39.259 38.761 3 3.1615E-27 43928 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 101.42 84.759 213280000 0 30679000 0 9839100 9240200 13993000 8614600 11361000 10721000 17947000 23066000 27035000 15778000 14051000 20958000 26388 3974 24081 222288;222289;222290;222291;222292;222293;222294;222295;222296;222297;222298;222299;222300;222301;222302 177297;177298;177299;177300;177301;177302;177303;177304;177305;177306 177305 10 KGDDQSRQGGAPDAGQE Unmodified 1714.7507 0.75066819 1570 P49368 CCT3 T-complex protein 1 subunit gamma yes yes 0 0 2 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 2 3 2 8.1699 5.0863 2;3 5.8744E-06 7019 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 93.495 89.324 480910000 95256000 368300000 17356000 0 0 0 0 0 0 0 0 0 0 0 0 26389 1570 24082 222303;222304;222305;222306;222307;222308;222309 177307;177308;177309 177308 3 KGDECELLGHSK Unmodified 1371.6453 0.64526383 1572 P49411 TUFM Elongation factor Tu, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.67 0.471 1 2 1 1 1 25.866 21.909 3 1.2908E-05 27900 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 100.02 87.014 118920000 700060 4892500 113330000 0 0 0 0 0 0 0 0 0 0 0 0 26390 1572 24083 222310;222311;222312 177310;177311;177312;177313;177314;177315 177314 6 KGDEDFTK Unmodified 938.43453 0.434526 4616 Q9NRY5 FAM114A2 Protein FAM114A2 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 8.9659 5.6573 2 0.018489 7586 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 144.5 86.938 81177000 0 81177000 0 0 0 0 0 0 0 0 0 0 0 0 0 26391 4616 24084 222313;222314 177316 177316 1 KGDEVQCEIEELGVIINK Unmodified 2072.046 0.0459705 3855 Q96GK7;Q6P2I3 FAHD2A;FAHD2B Fumarylacetoacetate hydrolase domain-containing protein 2A;Fumarylacetoacetate hydrolase domain-containing protein 2B yes no 0 0 1 By MS/MS 2 0 1 1 94.963 90.099 3 0.0010011 111759 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 39.364 31.176 8895500 0 8895500 0 0 0 0 0 0 0 0 0 0 0 0 0 26392 3855 24085 222315 177317 177317 1 KGDEYIINGQK Unmodified 1263.6459 0.64591575 944 P11310 ACADM Medium-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 0 0 1 By MS/MS 2.67 0.471 1 2 3 31.13 26.685 2;3 0.026464 35164 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.533 63.447 45266000 0 45266000 0 0 0 0 0 0 0 0 0 0 0 0 0 26393 944 24086 222316;222317;222318 177318;177319;177320 177318 2 KGDGISPLREEAAGAEDEK Unmodified 1970.9545 0.95451296 2164 Q08AD1 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 38.196 38.419 3 0.00083876 41449 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.719 28.868 41635000 0 0 0 0 2496200 3059300 4663400 2877700 2506900 4032400 5315000 8093000 0 0 8591000 26394 2164 24087 222319;222320;222321;222322;222323;222324;222325;222326;222327 177321;177322;177323 177322 2 KGDIIQLQR Unmodified 1069.6244 0.62439245 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.204 38.384 2 0.0002952 41667 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 117.76 87.124 299430000 0 0 0 11727000 12766000 24199000 16316000 10667000 14092000 21612000 27910000 52995000 20523000 30529000 56097000 26395 848 24088 222328;222329;222330;222331;222332;222333;222334;222335;222336;222337;222338;222339 177324;177325;177326;177327 177327 0 KGDILLDENCCVESLPDK Unmodified 2103.9817 0.98165568 4890 Q9UH65 SWAP70 Switch-associated protein 70 yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 74.934 68.895 3 9.3499E-05 89716 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.688 42.108 25964000 14866000 11098000 0 0 0 0 0 0 0 0 0 0 0 0 0 26396 4890 24089 222340;222341 177328;177329;177330 177330 3 KGDILTLLNSTNK Unmodified 1415.7984 0.79839365 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.62 1.7 1 20 1 1 1 2 2 1 1 2 2 2 2 2 2 75.502 75.207 2;3 1.914E-08 86648 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 78.529 69.932 178050000 19553000 0 0 3122900 2247800 15422000 8394600 5241800 5446900 16008000 14515000 22699000 8032900 11634000 45736000 26397 2344 24090 222342;222343;222344;222345;222346;222347;222348;222349;222350;222351;222352;222353;222354;222355;222356;222357;222358;222359;222360;222361;222362 177331;177332;177333;177334;177335;177336;177337;177338;177339;177340;177341;177342;177343;177344;177345;177346 177333 12 KGDIVDIK Unmodified 886.51238 0.51238239 1509 P46778 RPL21 60S ribosomal protein L21 yes yes 0 0 1 By matching By MS/MS 2.67 0.471 1 2 1 2 33.837 29.08 2 0.015616 36163 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 107.9 39.52 114590000 463160 114130000 0 0 0 0 0 0 0 0 0 0 0 0 0 26398 1509 24091 222363;222364;222365 177347 177347 0 KGDLLLNR Unmodified 927.55016 0.55016488 2471 Q15008 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.882 32.069 2 1.9799E-11 33520 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 191.63 128.32 568860000 0 0 0 32804000 46431000 54957000 16061000 14670000 11330000 78872000 106180000 129560000 14290000 18890000 44811000 26399 2471 24092 222366;222367;222368;222369;222370;222371;222372;222373;222374;222375;222376;222377 177348;177349;177350;177351;177352 177350 0 KGDLSVEEVMK Unmodified 1233.6275 0.6274885 3740 Q96AT1 KIAA1143 Uncharacterized protein KIAA1143 yes yes 0 0 1 By MS/MS By MS/MS 2.4 0.49 3 2 4 1 55.14 50.08 2;3 0.00030196 65192 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.492 64.348 89612000 0 85246000 4365200 0 0 0 0 0 0 0 0 0 0 0 0 26400 3740 24093 222378;222379;222380;222381;222382 177353;177354;177355;177356 177353 4 KGDLSVEEVMK Oxidation (M) 1249.6224 0.62240312 3740 Q96AT1 KIAA1143 Uncharacterized protein KIAA1143 yes yes 0 1 1 By MS/MS 3 0 2 2 34.535 29.993 2;3 0.0067165 37470 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 57.175 39.963 21251000 0 21251000 0 0 0 0 0 0 0 0 0 0 0 0 0 26401 3740 24093 222383;222384 177357;177358 177357 5318 0 KGDNVPQVNGENTER Unmodified 1655.7863 0.78632542 5050 Q9UPN6 SCAF8 Protein SCAF8 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 21.433 21.595 3 0.00058825 21436 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.711 28.509 38006000 0 0 0 5543700 4822800 0 5013400 4345300 4453600 3963300 0 4783300 0 0 5080900 26402 5050 24094 222385;222386;222387;222388;222389;222390;222391;222392 177359;177360;177361;177362;177363;177364;177365 177360 7 KGDSSAEELK Unmodified 1062.5193 0.51931826 1203 P26373 RPL13 60S ribosomal protein L13 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 7.0175 6.3308 2 1.2849E-10 6678 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 177.78 79.255 357350000 25068000 248890000 6238000 4740500 7377200 6575100 9282600 7866400 9201200 3329200 5925300 5863200 5433000 5335100 6232500 26403 1203 24095 222393;222394;222395;222396;222397;222398;222399;222400;222401;222402;222403;222404;222405;222406;222407;222408 177366;177367;177368;177369;177370;177371;177372;177373;177374;177375;177376;177377;177378 177370 13 KGDVEGSQSQDEGEGSGESER Unmodified 2165.8945 0.89449147 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 8.1535 8.2636 3 1.5561E-44 5639 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 116.35 106.29 86957000 0 0 0 6998000 3765400 3845700 3355400 5068600 4945700 6501300 0 24275000 7965500 6681700 13555000 26404 5071 24096 222409;222410;222411;222412;222413;222414;222415;222416;222417;222418;222419;222420 177379;177380;177381;177382;177383;177384;177385;177386;177387;177388;177389;177390;177391 177385 13 KGDYIEAESSYSR Unmodified 1503.6842 0.68415175 4034 Q99614 TTC1 Tetratricopeptide repeat protein 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 33.426 33.18 3 0.00082054 35366 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 44.132 38.63 69919000 0 0 3533200 0 0 4239700 0 0 0 6097700 0 16541000 0 13585000 25923000 26405 4034 24097 222421;222422;222423;222424;222425;222426;222427;222428 177392;177393;177394;177395;177396;177397 177395 5 KGDYPLFGCK Unmodified 1183.5696 0.56957969 296 O43148 RNMT mRNA cap guanine-N7 methyltransferase yes yes 0 0 1 By MS/MS 2 0 2 2 57.711 49.53 2;3 0.015399 67524 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.149 65.63 39790000 39790000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26406 296 24098 222429;222430 177398;177399 177398 1 KGEDFVK Unmodified 821.42832 0.42831841 1423 P40926 MDH2 Malate dehydrogenase, mitochondrial yes yes 0 0 1 By MS/MS 3 0 1 1 15.359 11.833 2 0.042936 14778 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 122.74 55.748 136080000 0 136080000 0 0 0 0 0 0 0 0 0 0 0 0 0 26407 1423 24099 222431 177400 177400 0 KGEDVLGSVRR Unmodified 1214.6731 0.67313356 1779 P56192 MARS Methionine--tRNA ligase, cytoplasmic yes yes 0 0 2 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 26.96 27.261 3 0.0094407 29008 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 76.655 45.783 287810000 0 0 0 0 0 26295000 17298000 19378000 12207000 29920000 36065000 28876000 31420000 28088000 58267000 26408 1779 24100 222432;222433;222434;222435;222436;222437;222438;222439;222440;222441 177401;177402;177403 177401 2 KGEFETGFEK Unmodified 1170.5557 0.55570376 1014 P15170;Q8IYD1 GSPT1;GSPT2 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A;Eukaryotic peptide chain release factor GTP-binding subunit ERF3B yes no 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 33.241 33.969 2 0.0076722 36648 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 111.73 58.241 34359000 0 0 0 0 0 0 0 0 0 0 0 22459000 0 0 11900000 26409 1014 24101 222442;222443 177404;177405 177405 2 KGEGAPIQGK Unmodified 983.53999 0.53999412 4817 Q9P2E9 RRBP1 Ribosome-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 9.5942 6.0795 2 0.011784 8540 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.143 54.034 11902000 3733900 8168100 0 0 0 0 0 0 0 0 0 0 0 0 0 26410 4817 24102 222444;222445 177406 177406 1 KGEGLPNFDNNNIK Unmodified 1558.774 0.77396981 4855 Q9UBS4 DNAJB11 DnaJ homolog subfamily B member 11 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 6.08 3.93 5 1 6 1 3 2 1 1 1 1 1 1 54.497 51.859 2;3 0.0008239 56513 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.509 34.594 263520000 14362000 98859000 43825000 10656000 0 0 10208000 9466900 0 0 0 0 19738000 17424000 38976000 26411 4855 24103 222446;222447;222448;222449;222450;222451;222452;222453;222454;222455;222456;222457 177407;177408;177409;177410;177411;177412;177413;177414;177415;177416;177417;177418;177419 177411 13 KGEIFELK Unmodified 962.54368 0.54368251 2178;1937 P63010;Q10567 AP2B1;AP1B1 AP-2 complex subunit beta;AP-1 complex subunit beta-1 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 50.676 49.37 2 1.9126E-05 63386 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 199.7 108.93 1386600000 555760000 77326000 125060000 30097000 26120000 78907000 32880000 34580000 40594000 60294000 64851000 50249000 64566000 61592000 83742000 26412 1937;2178 24104 222458;222459;222460;222461;222462;222463;222464;222465;222466;222467;222468;222469;222470;222471;222472;222473 177420;177421;177422;177423;177424;177425;177426;177427 177425 2 KGEITGEVR Unmodified 987.53491 0.53490874 1124 P21333 FLNA Filamin-A yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13.799 13.247 2 1.3702E-05 11630 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 158.87 102.33 445670000 7309700 15267000 30436000 10069000 14042000 18886000 21120000 11488000 12930000 46600000 56230000 49781000 34382000 32383000 84745000 26413 1124 24105 222474;222475;222476;222477;222478;222479;222480;222481;222482;222483;222484;222485;222486;222487;222488 177428;177429;177430;177431;177432;177433;177434;177435;177436;177437;177438;177439;177440 177436 2 KGEITGEVRMPSGK Unmodified 1487.7766 0.77661235 1124 P21333 FLNA Filamin-A yes yes 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 41.694 36.523 3 2.2167E-23 45998 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 132.65 117.26 524590000 492500000 0 32091000 0 0 0 0 0 0 0 0 0 0 0 0 26414 1124 24106 222489;222490 177441;177442;177443;177444 177444 4 KGEITGEVRMPSGK Oxidation (M) 1503.7715 0.77152697 1124 P21333 FLNA Filamin-A yes yes 0 1 2 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 23.374 19.384 3 0.0026245 24477 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 57.794 39.336 658320000 616410000 8389900 33519000 0 0 0 0 0 0 0 0 0 0 0 0 26415 1124 24106 222491;222492;222493 177445;177446 177446 1615 0 KGELTQEEK Unmodified 1060.5401 0.5400537 3221 Q8IV38 ANKMY2 Ankyrin repeat and MYND domain-containing protein 2 yes yes 0 0 1 By MS/MS 3 0 1 1 7.8882 4.5297 2 0.0049269 6258 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 130.98 36.673 8954300 0 8954300 0 0 0 0 0 0 0 0 0 0 0 0 0 26416 3221 24107 222494 177447 177447 0 KGENSVSVDGK Unmodified 1118.5568 0.5567664 193 O14617 AP3D1 AP-3 complex subunit delta-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8.3884 7.8645 2 3.0421E-24 9817 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 193.3 135.75 98604000 9220100 36881000 1001100 1801100 1900500 3681700 2724000 3387200 3647800 4051000 7949900 6999400 4968000 4214400 6177400 26417 193 24108 222495;222496;222497;222498;222499;222500;222501;222502;222503;222504;222505;222506;222507;222508;222509 177448;177449;177450;177451;177452;177453 177448 5 KGEPVSAEDLGVSGALTVLMK Oxidation (M) 2116.1086 0.10857076 953 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS 3.11 2.47 6 2 1 2 4 2 1 87.533 83.409 3 1.4082E-13 100235 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 96.633 88.679 137680000 27045000 78589000 23818000 0 0 0 0 0 0 0 0 0 0 0 8231800 26418 953 24109 222510;222511;222512;222513;222514;222515;222516;222517;222518 177454;177455;177456;177457;177458;177459;177460;177461;177462 177456 1230 6 KGEPVSAEDLGVSGALTVLMK Unmodified 2100.1137 0.11365613 953 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 93.898 89.557 3 4.5393E-14 109474 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 76.417 66.505 58765000 50443000 3546500 4776000 0 0 0 0 0 0 0 0 0 0 0 0 26419 953 24109 222519;222520;222521;222522;222523 177463;177464;177465;177466;177467 177467 5 KGEQMNSAVLPEMENQVAVSSLSAVIK 2 Oxidation (M) 2890.4416 0.44160857 1474 P43246 MSH2 DNA mismatch repair protein Msh2 yes yes 0 2 1 By MS/MS By MS/MS 10 0 2 1 1 82.34 82.488 3 1.5311E-14 95400 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 52.707 45.514 29577000 0 0 0 0 0 0 0 0 0 16480000 13097000 0 0 0 0 26420 1474 24110 222524;222525 177468;177469 177468 2320;2321 2 KGEQTSSGTLSAFASYFNSK Unmodified 2109.0015 0.0014631481 2021 P98082 DAB2 Disabled homolog 2 yes yes 0 0 1 By MS/MS 10 0 1 1 81.619 81.834 3 1.4786E-05 94364 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.588 49.878 5965400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5965400 26421 2021 24111 222526 177470 177470 1 KGESQTDIEITREEDFTR Unmodified 2153.0237 0.023655153 1570 P49368 CCT3 T-complex protein 1 subunit gamma yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.47 2 2 28 2 2 3 3 2 4 2 2 2 2 2 2 2 52.192 52.03 3;4 1.7241E-46 58767 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 156.13 146.17 769160000 16405000 0 0 42113000 29865000 110290000 50034000 69471000 46599000 65347000 64806000 79387000 58723000 43781000 92332000 26422 1570 24112 222527;222528;222529;222530;222531;222532;222533;222534;222535;222536;222537;222538;222539;222540;222541;222542;222543;222544;222545;222546;222547;222548;222549;222550;222551;222552;222553;222554;222555;222556 177471;177472;177473;177474;177475;177476;177477;177478;177479;177480;177481;177482;177483;177484;177485;177486;177487;177488;177489;177490;177491;177492;177493;177494;177495;177496 177471 16 KGETLSQEEQRK Unmodified 1431.7318 0.73177065 5083 Q9Y259 CHKB Choline/ethanolamine kinase yes yes 0 0 2 By MS/MS 2 0 1 1 8.053 5.8258 3 0.049345 7959 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 43.382 33.057 3771200 0 0 3771200 0 0 0 0 0 0 0 0 0 0 0 0 26423 5083 24113 222557 177497 177497 0 KGEVQTVASTQDLR Unmodified 1530.8002 0.80018457 674 O95625 ZBTB11 Zinc finger and BTB domain-containing protein 11 yes yes 0 0 1 By matching By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 33.794 34.104 3 0.01744 37130 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 26.929 15.985 32935000 0 0 0 0 0 9233400 5665000 0 0 0 10221000 0 0 0 7815900 26424 674 24114 222558;222559;222560;222561;222562 177498;177499;177500 177499 1 KGGDGIK Unmodified 673.37589 0.3758889 4636 Q9NTK5 OLA1 Obg-like ATPase 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 9.3409 5.8262 1 0.015312 9861 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.306 2.9619 58334000 4122700 54211000 0 0 0 0 0 0 0 0 0 0 0 0 0 26425 4636 24115 222563;222564 177501 177501 0 KGGEFDEFVNDDTDDDLPISK Unmodified 2355.039 0.039030446 2945 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 81.397 76.068 3 0.00020358 94420 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 57.826 54.773 18619000 11960000 0 6659000 0 0 0 0 0 0 0 0 0 0 0 0 26426 2945 24116 222565;222566 177502;177503;177504 177504 3 KGGPGPASARPSESK Unmodified 1424.7372 0.73719038 3938 Q96NU1 SAMD11 Sterile alpha motif domain-containing protein 11 yes yes 0 0 2 By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 6.6942 6.8274 3 0.020164 5050 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 53.981 42.937 31894000 0 0 0 1548900 1738500 0 2493300 1479500 1929300 0 5041000 4471300 4505400 4100100 4586600 26427 3938 24117 222567;222568;222569;222570;222571;222572;222573;222574;222575;222576 177505;177506 177505 1 KGGPSPGDVEAIK Unmodified 1253.6616 0.66156582 892 P09661 SNRPA1 U2 small nuclear ribonucleoprotein A' yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 6 2 24 2 4 2 2 2 2 2 2 2 2 2 2 2 2 2 34.482 33.392 2;3 9.3543E-07 41697 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 87.498 43.199 941940000 37259000 468120000 30575000 17325000 23035000 17934000 31606000 22578000 17433000 40438000 51055000 43246000 40678000 43666000 56991000 26428 892 24118 222577;222578;222579;222580;222581;222582;222583;222584;222585;222586;222587;222588;222589;222590;222591;222592;222593;222594;222595;222596;222597;222598;222599;222600;222601;222602;222603;222604;222605;222606;222607;222608 177507;177508;177509;177510;177511;177512;177513;177514;177515;177516;177517;177518;177519;177520;177521;177522;177523;177524;177525;177526;177527;177528;177529;177530;177531;177532 177519 23 KGGSFQLNELQGLK Unmodified 1517.8202 0.82019173 764 P02788 LTF Lactotransferrin;Lactoferricin-H;Kaliocin-1;Lactoferroxin-A;Lactoferroxin-B;Lactoferroxin-C yes yes 0 0 1 By MS/MS 10 0 1 1 69.949 70.064 3 0.0095119 80501 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 32.127 24.925 7478000 0 0 0 0 0 0 0 0 0 7478000 0 0 0 0 0 26429 764 24119 222609 177533 177533 1 KGGSWIQEINVAEK Unmodified 1557.8151 0.81510635 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching By MS/MS 8.77 2.89 2 11 2 1 1 1 1 1 1 1 1 1 1 1 70.594 69.453 2;3 3.3266E-43 92346 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 192.86 141.59 429330000 334970000 0 0 4623800 0 4236100 3301800 6712200 4374700 6510500 8869800 11881000 8288200 8777200 26784000 26430 1986 24120 222610;222611;222612;222613;222614;222615;222616;222617;222618;222619;222620;222621;222622 177534;177535;177536;177537;177538;177539 177537 4 KGHAVGDIPGVR Unmodified 1204.6677 0.66765425 1884 P62266 RPS23 40S ribosomal protein S23 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 1 1 2 1 2 2 1 3 2 2 29.484 29.747 3 0.0005819 33156 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 48.568 31.936 298470000 0 0 0 10477000 13459000 11728000 0 20497000 15464000 33018000 29121000 48524000 38849000 36236000 41095000 26431 1884 24121 222623;222624;222625;222626;222627;222628;222629;222630;222631;222632;222633;222634;222635;222636;222637;222638;222639;222640 177540;177541;177542;177543;177544;177545;177546;177547;177548;177549 177549 9 KGHEENGDVVTEPQVAEK Unmodified 1964.9439 0.94394827 4879 Q9UG63 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 2 2 2 1 1 2 2 2 2 2 2 28.238 28.456 3;4 0.0016583 30063 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 36.253 30.299 144760000 0 0 0 10471000 8613600 0 10411000 2743500 3858800 14792000 22522000 25640000 13945000 11097000 20670000 26432 4879 24122 222641;222642;222643;222644;222645;222646;222647;222648;222649;222650;222651;222652;222653;222654;222655;222656;222657;222658;222659;222660 177550;177551;177552;177553;177554;177555 177554 5 KGNFNYIEFTR Unmodified 1387.6884 0.68844927 229 P19105;O14950 MYL12A;MYL12B Myosin regulatory light chain 12A;Myosin regulatory light chain 12B yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 63.927 64.025 3 0.00015148 73620 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 71.555 61.503 99283000 0 0 0 5838000 5181100 0 0 11370000 9900700 6255900 11195000 16777000 9773700 9380100 13611000 26433 229 24123 222661;222662;222663;222664;222665;222666;222667;222668;222669;222670;222671 177556;177557;177558;177559;177560;177561;177562;177563;177564 177562 9 KGPAAIQK Unmodified 811.49159 0.49158736 1354 P35527;CON__P35527 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.72 2 13 1 1 1 1 1 1 1 1 1 1 1 1 2 1 6.4689 6.1911 2 1.8869E-47 4110 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 195.98 123.96 + 8813800000 2900500000 0 384520000 669520000 450220000 181350000 321750000 2517200000 225750000 195260000 217290000 343780000 235910000 90084000 80768000 26434 1354 24124 222672;222673;222674;222675;222676;222677;222678;222679;222680;222681;222682;222683;222684;222685;222686 177565;177566;177567;177568;177569;177570;177571;177572;177573;177574;177575;177576;177577;177578;177579;177580;177581 177566 16 KGPESVPPSLLK Unmodified 1250.7234 0.72343779 2823 Q5VW36 FOCAD Focadhesin yes yes 0 0 1 By MS/MS By MS/MS 2 0 5 3 2 57.679 51.188 2;3 0.0067426 70023 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.958 45.891 37237000 30658000 0 6578700 0 0 0 0 0 0 0 0 0 0 0 0 26435 2823 24125 222687;222688;222689;222690;222691 177582;177583;177584;177585 177585 3 KGPGEVAGTVTGQK Unmodified 1327.7096 0.70957864 3141 Q86U44 METTL3 N6-adenosine-methyltransferase 70 kDa subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.56 3.86 3 1 5 1 2 1 1 1 1 1 1 23.889 22.207 3 0.0016947 23034 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 44.44 22.681 84414000 21475000 12537000 8079100 0 0 9033400 0 0 0 0 8751100 0 5717300 6703400 12118000 26436 3141 24126 222692;222693;222694;222695;222696;222697;222698;222699;222700 177586;177587;177588;177589;177590;177591;177592 177586 6 KGPGLAVQSGDK Unmodified 1155.6248 0.62478638 3948 Q96PK6 RBM14 RNA-binding protein 14 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.04 2.6 3 22 1 1 1 2 2 2 2 2 2 2 1 2 2 2 1 17.91 17.578 2;3 0.0022068 26344 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.46 54.698 286070000 104570000 11879000 15348000 14440000 10589000 10731000 13620000 10508000 7889300 12700000 4090900 24807000 21810000 16402000 6687500 26437 3948 24127 222701;222702;222703;222704;222705;222706;222707;222708;222709;222710;222711;222712;222713;222714;222715;222716;222717;222718;222719;222720;222721;222722;222723;222724;222725 177593;177594;177595;177596;177597;177598;177599;177600 177595 4 KGPGPGGGVSGGK Unmodified 1053.5567 0.55670682 620 O95081 AGFG2 Arf-GAP domain and FG repeat-containing protein 2 yes yes 0 0 1 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6.5567 6.2542 2 0.00021584 3832 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.9 58.671 104270000 58269000 0 4992400 2947700 3097400 2801200 4483500 4515900 3857600 2342000 4382800 2045600 2773500 2694400 5065400 26438 620 24128 222726;222727;222728;222729;222730;222731;222732;222733;222734;222735;222736;222737;222738;222739 177601;177602;177603;177604;177605;177606;177607;177608;177609;177610;177611;177612 177604 12 KGPQEVGPQGPAVPSGGGR Unmodified 1773.9122 0.91219463 3559 Q8WVB6 CHTF18 Chromosome transmission fidelity protein 18 homolog yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 34.603 34.939 3 0.00047799 38502 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 44.054 31.908 16286000 0 0 0 0 0 0 0 0 0 0 0 0 16286000 0 0 26439 3559 24129 222740;222741 177613;177614 177614 2 KGPQSLFNAPR Unmodified 1213.6568 0.65675521 1497 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 44.859 45.154 3 0.033116 49882 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 29.317 20.511 9954400 0 0 0 0 0 0 0 0 0 0 0 0 6245500 3709000 0 26440 1497 24130 222742;222743 177615 177615 1 KGPSGYGFNLHSDK Unmodified 1505.7263 0.72629134 209 O14745 SLC9A3R1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 37.558 37.168 3 0.00025981 52531 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.476 56.693 145940000 31370000 0 0 0 0 0 5307500 4809500 4266100 5512400 13373000 29382000 8036900 7998600 35887000 26441 209 24131 222744;222745;222746;222747;222748;222749;222750;222751;222752;222753 177616;177617;177618;177619;177620 177617 5 KGPSTPYTK Unmodified 977.5182 0.51819605 3475 Q8TAQ2 SMARCC2 SWI/SNF complex subunit SMARCC2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10.919 10.382 2 0.0089312 13030 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 109.44 55.885 632220000 457120000 8885200 27996000 10066000 6892700 10771000 13571000 9383900 9477800 11956000 13303000 11742000 13446000 14434000 13181000 26442 3475 24132 222754;222755;222756;222757;222758;222759;222760;222761;222762;222763;222764;222765;222766;222767;222768 177621;177622;177623;177624;177625;177626;177627;177628;177629;177630;177631 177628 3 KGPSTVTDLEDTK Unmodified 1389.6987 0.69873919 613 O94973 AP2A2 AP-2 complex subunit alpha-2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 37.076 32.9 3 0.016313 43171 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 40.278 28.334 21499000 0 20238000 1260900 0 0 0 0 0 0 0 0 0 0 0 0 26443 613 24133 222769;222770 177632 177632 1 KGQAVDYEGSR Unmodified 1208.5786 0.57856447 982 P13667 PDIA4 Protein disulfide-isomerase A4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 11.526 11.69 3 0.0016102 10598 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 48.044 38.389 51483000 0 0 0 5074900 3568200 0 4860500 4272800 0 2976900 6063700 7598500 4142400 4827200 8098200 26444 982 24134 222771;222772;222773;222774;222775;222776;222777;222778;222779;222780 177633;177634;177635;177636;177637;177638;177639;177640;177641;177642;177643 177638 11 KGQAVDYEGSRTQEEIVAK Unmodified 2107.0546 0.054561351 982 P13667 PDIA4 Protein disulfide-isomerase A4 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.87 3.54 4 11 2 2 1 1 1 1 1 1 1 1 1 1 1 37.107 35.881 3;4 1.3334E-45 38137 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 126.26 109.51 433820000 45445000 0 294540000 5277800 3576500 0 8291600 10126000 4097200 6441400 8491900 11007000 8420500 6161500 21944000 26445 982 24135 222781;222782;222783;222784;222785;222786;222787;222788;222789;222790;222791;222792;222793;222794;222795 177644;177645;177646;177647;177648;177649;177650;177651;177652;177653;177654;177655;177656;177657 177647 14 KGQGGAGAGDDEEED Unmodified 1433.5543 0.55425979 1511 P46781 RPS9 40S ribosomal protein S9 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.53 3.84 2 3 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 18.534 18.654 2 1.849E-20 3805 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 141.93 141.93 261110000 100450000 98577000 1128400 4403800 6119600 4556300 8225700 7293200 5497900 2781500 4076900 4791000 5332300 2418000 5464800 26446 1511 24136 222796;222797;222798;222799;222800;222801;222802;222803;222804;222805;222806;222807;222808;222809;222810;222811;222812 177658;177659;177660;177661;177662;177663;177664;177665;177666;177667;177668;177669;177670;177671;177672 177659 15 KGQGTAATGNQATPK Unmodified 1428.7321 0.732105 2768 Q5T1M5 FKBP15 FK506-binding protein 15 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 2 5 2 1 1 1 1 1 6.375 5.4362 2;3 6.4866E-41 6915 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 164.48 135.75 98853000 88101000 0 0 2232300 1432500 0 0 0 0 2105000 0 0 2482600 0 2499700 26447 2768 24137 222813;222814;222815;222816;222817;222818;222819 177673;177674;177675 177674 3 KGQSEEIQK Unmodified 1045.5404 0.54038805 2006 P83731 RPL24 60S ribosomal protein L24 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 5.9894 2.6885 2 1.05E-05 4871 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 158.57 81.508 72791000 0 72791000 0 0 0 0 0 0 0 0 0 0 0 0 0 26448 2006 24138 222820;222821 177676 177676 1 KGQTPGGAQFVGLELYK Unmodified 1791.9519 0.95193418 2328 Q13616 CUL1 Cullin-1 yes yes 0 0 1 By MS/MS 2 0 1 1 82.563 74.432 3 0.0024134 97487 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.754 33.583 5695600 5695600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26449 2328 24139 222822 177677 177677 1 KGSEVESVK Unmodified 961.50803 0.50802529 1144 P22694 PRKACB cAMP-dependent protein kinase catalytic subunit beta yes yes 0 0 1 By MS/MS 3 0 1 1 7.6355 4.2771 2 0.0023706 6011 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 147.4 41.837 28003000 0 28003000 0 0 0 0 0 0 0 0 0 0 0 0 0 26450 1144 24140 222823 177678 177678 1 KGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSR Unmodified 3841.9738 0.97379842 823 P06576 ATP5B ATP synthase subunit beta, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 91.094 90.975 4 3.6132E-07 105947 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 30.237 25.705 11423000 0 0 0 4812400 2668300 0 0 0 0 0 0 0 0 0 3942400 26451 823 24141 222824;222825;222826 177679;177680;177681;177682 177680 3 KGTEVQVDDIK Unmodified 1230.6456 0.6455814 5077 Q9Y230 RUVBL2 RuvB-like 2 yes yes 0 0 1 By MS/MS 10 0 1 1 28.647 28.986 2 0.043213 31362 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 59.426 15.618 4804100 0 0 0 0 0 0 0 0 0 0 0 0 4804100 0 0 26452 5077 24142 222827 177683 177683 1 KGTNYLADVFEK Unmodified 1383.7034 0.70343063 1295 P31151 S100A7 Protein S100-A7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.71 1.48 1 27 1 4 2 1 2 2 2 2 2 3 2 3 2 72.166 71.914 2;3 5.6248E-08 82301 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 141.13 102.82 1124700000 11113000 0 0 623360000 28688000 16839000 33313000 44575000 16982000 45377000 85173000 94046000 34022000 27225000 64002000 26453 1295 24143 222828;222829;222830;222831;222832;222833;222834;222835;222836;222837;222838;222839;222840;222841;222842;222843;222844;222845;222846;222847;222848;222849;222850;222851;222852;222853;222854;222855 177684;177685;177686;177687;177688;177689;177690;177691;177692;177693;177694;177695;177696;177697;177698;177699;177700;177701;177702;177703;177704;177705;177706;177707 177692 18 KGTPWEGGLFK Unmodified 1218.6397 0.63970816 1952 P63279 UBE2I SUMO-conjugating enzyme UBC9 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 66.771 66.091 2;3 0.00012818 90806 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 115.78 69.356 64373000 17332000 0 0 2203200 1455900 0 2894400 5741700 1154700 2061700 5448300 0 4011100 6428200 15642000 26454 1952 24144 222856;222857;222858;222859;222860;222861;222862;222863;222864;222865;222866 177708;177709;177710;177711 177709 4 KGTVEGFEPADNK Unmodified 1390.6729 0.67285879 1386 P37108 SRP14 Signal recognition particle 14 kDa protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.12 2.45 2 1 23 2 1 2 2 2 2 2 2 2 1 2 2 2 2 28.464 28.152 2;3 9.3097E-12 30195 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 153.34 113.72 840650000 0 231560000 8300100 35683000 46119000 28340000 42727000 39763000 27417000 50310000 56204000 75198000 56154000 56024000 86849000 26455 1386 24145 222867;222868;222869;222870;222871;222872;222873;222874;222875;222876;222877;222878;222879;222880;222881;222882;222883;222884;222885;222886;222887;222888;222889;222890;222891;222892 177712;177713;177714;177715;177716;177717;177718;177719;177720;177721;177722;177723;177724;177725;177726;177727;177728 177715 11 KGVNLPGAAVDLPAVSEK Unmodified 1763.9781 0.97814893 1000 P14618 PKM Pyruvate kinase PKM yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.39 3.7 5 1 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 76.821 75.364 2;3 3.5215E-30 87155 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 114.56 106.26 607170000 88313000 45501000 8510800 15927000 23100000 14604000 37649000 29108000 31452000 34768000 55796000 104160000 11604000 28258000 78418000 26456 1000 24146 222893;222894;222895;222896;222897;222898;222899;222900;222901;222902;222903;222904;222905;222906;222907;222908;222909;222910 177729;177730;177731;177732;177733;177734;177735;177736;177737;177738;177739;177740;177741;177742;177743;177744;177745;177746;177747;177748;177749;177750;177751;177752;177753;177754;177755 177755 27 KGVVPGGGLK Unmodified 910.56 0.56000128 547 O75822 EIF3J Eukaryotic translation initiation factor 3 subunit J yes yes 0 0 1 By MS/MS 2 0 1 1 30.842 25.123 2 0.031093 35263 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.732 25.477 32998000 32998000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26457 547 24147 222911 177756 177756 1 KGYNVNDEK Unmodified 1065.5091 0.50908792 1993 P80723 BASP1 Brain acid soluble protein 1 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 9.3385 6.0299 2 0.03807 8617 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.744 37.829 19354000 0 19354000 0 0 0 0 0 0 0 0 0 0 0 0 0 26458 1993 24148 222912;222913 177757 177757 1 KHDNETNLSTEK Unmodified 1414.6688 0.66883604 396 O60333 KIF1B Kinesin-like protein KIF1B yes yes 0 0 1 By matching By MS/MS 2 0 2 1 1 7.6538 4.751 3 0.0010108 6660 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 81.552 58.831 42400000 4201600 0 38198000 0 0 0 0 0 0 0 0 0 0 0 0 26459 396 24149 222914;222915 177758 177758 1 KHDSGAADLER Unmodified 1197.5738 0.57381344 4716 Q9NX55 HYPK Huntingtin-interacting protein K yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching 10 0 11 1 1 2 1 1 1 1 1 1 1 7.5102 7.6244 3 0.00014559 5640 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 67.879 58.137 210210000 0 0 0 1250200 3156400 0 26217000 18526000 4085200 14935000 89599000 47681000 3931000 826720 0 26460 4716 24150 222916;222917;222918;222919;222920;222921;222922;222923;222924;222925;222926 177759;177760;177761;177762 177759 3 KHEAFESDLAAHQDR Unmodified 1752.818 0.81795989 356;971;1359 O43707;P12814;P35609 ACTN4;ACTN1;ACTN2 Alpha-actinin-4;Alpha-actinin-1;Alpha-actinin-2 no no 0 0 1 By MS/MS 10 0 1 1 26.448 27.129 3 0.0052938 28069 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 34.666 24.199 7786200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7786200 26461 356;971;1359 24151 222927 177763 177763 1 KHEEEEAK Unmodified 998.46689 0.46688876 1196 P25789 PSMA4 Proteasome subunit alpha type-4 yes yes 0 0 1 By MS/MS 1 0 1 1 108.98 114.24 2 0.0046971 95488 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 166.52 73.088 33382000 33382000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26462 1196 24152 222928 177764 177764 1 KHEETECPLR Unmodified 1297.6085 0.60848439 186 O14545 TRAFD1 TRAF-type zinc finger domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 10.339 10.463 3 0.011457 8097 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.034 21.109 30859000 0 0 0 1894400 0 1764600 2505900 1367300 1736700 3046600 0 0 6238800 5242300 7062700 26463 186 24153 222929;222930;222931;222932;222933;222934;222935;222936;222937 177765;177766 177765 2 KHETTASFLTDSLDK Unmodified 1691.8366 0.83662965 342 O43572 AKAP10 A-kinase anchor protein 10, mitochondrial yes yes 0 0 1 By MS/MS 2 0 1 1 68.657 60.362 3 0.0040621 80796 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 35.771 28.041 18565000 18565000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26464 342 24154 222938 177767 177767 0 KHFPEFPATR Unmodified 1228.6353 0.63529149 3230 Q8IVM0 CCDC50 Coiled-coil domain-containing protein 50 yes yes 0 0 1 By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 40.665 40.94 3 0.027413 45793 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 26.673 4.6801 27283000 0 0 0 1324400 0 3623300 0 0 0 0 0 4791300 7258400 3730600 6555000 26465 3230 24155 222939;222940;222941;222942;222943;222944 177768 177768 1 KHLSGEEHEK Unmodified 1192.5836 0.58364985 3822 Q96EU6 RRP36 Ribosomal RNA processing protein 36 homolog yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 16.236 12.511 2 0.036184 16142 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 75.043 24.57 76756000 7723200 69033000 0 0 0 0 0 0 0 0 0 0 0 0 0 26466 3822 24156 222945;222946;222947 177769;177770 177770 2 KHPDASVNFSEFSK Unmodified 1591.7631 0.76307078 883 P09429 HMGB1 High mobility group protein B1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.91 3.86 1 24 4 45 19 6 4 4 4 5 1 2 4 2 4 4 7 3 5 53.746 51.818 2;3;4 4.935E-48 70785 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 151.56 110.18 7205000000 3049500000 390770000 416630000 78965000 43568000 177540000 34505000 134620000 180350000 192510000 556210000 441510000 294800000 223640000 989890000 26467 883 24157 222948;222949;222950;222951;222952;222953;222954;222955;222956;222957;222958;222959;222960;222961;222962;222963;222964;222965;222966;222967;222968;222969;222970;222971;222972;222973;222974;222975;222976;222977;222978;222979;222980;222981;222982;222983;222984;222985;222986;222987;222988;222989;222990;222991;222992;222993;222994;222995;222996;222997;222998;222999;223000;223001;223002;223003;223004;223005;223006;223007;223008;223009;223010;223011;223012;223013;223014;223015;223016;223017;223018;223019;223020;223021 177771;177772;177773;177774;177775;177776;177777;177778;177779;177780;177781;177782;177783;177784;177785;177786;177787;177788;177789;177790;177791;177792;177793;177794;177795;177796;177797;177798;177799;177800;177801;177802;177803;177804;177805;177806;177807;177808;177809;177810;177811;177812;177813;177814;177815;177816;177817;177818;177819;177820;177821;177822;177823;177824;177825;177826;177827;177828;177829;177830;177831;177832;177833;177834;177835;177836;177837;177838;177839;177840;177841;177842 177800 64 KHPDSSVNFAEFSK Unmodified 1591.7631 0.76307078 1207 P26583 HMGB2 High mobility group protein B2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.92 3.93 11 2 12 9 2 2 1 1 1 1 1 1 1 1 1 1 2 51.321 48.852 2;3;4 1.2089E-18 68427 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 126.32 26.286 3651100000 3171800000 119850000 112480000 8727500 0 12116000 8885700 10519000 8823300 12247000 27941000 40702000 9372200 20401000 87238000 26468 1207 24158 223022;223023;223024;223025;223026;223027;223028;223029;223030;223031;223032;223033;223034;223035;223036;223037;223038;223039;223040;223041;223042;223043;223044;223045;223046 177843;177844;177845;177846;177847;177848;177849;177850;177851;177852;177853;177854;177855;177856;177857;177858;177859;177860;177861;177862;177863 177855 19 KHPFPCPTSYR Unmodified 1388.6659 0.66593969 1039 P16435 POR NADPH--cytochrome P450 reductase yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 33.744 34.086 3 0.0093359 37633 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 27.526 24.053 49355000 0 0 0 0 0 3446400 2852800 0 3991900 0 5182100 13492000 8307200 3866900 8215900 26469 1039 24159 223047;223048;223049;223050;223051;223052;223053;223054 177864;177865 177864 2 KHTTDPDIDKK Unmodified 1296.6674 0.66737948 4115 Q9BRS2 RIOK1 Serine/threonine-protein kinase RIO1 yes yes 0 0 2 By MS/MS 2 0 1 1 7.0125 3.5803 3 0.032799 6661 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.326 38.663 17382000 17382000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26470 4115 24160 223055 177866 177866 1 KIALSYAHSTDSNSIGEDLNALSDSACSVSVLDPSEPR Unmodified 4004.8909 0.89093301 5104 Q9Y2I7 PIKFYVE 1-phosphatidylinositol 3-phosphate 5-kinase yes yes 0 0 1 By MS/MS 2 0 1 1 78.18 70.049 5 0.018415 92322 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 12.234 3.6366 18350000 18350000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26471 5104 24161 223056 177867 177867 1 KIDAAQNWLADPNGGPEGEEQIR Unmodified 2507.2041 0.20407913 1073 P18206 VCL Vinculin yes yes 0 0 1 By MS/MS 10 0 1 1 72.162 72.565 3 4.907E-17 82958 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.885 78.904 15441000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15441000 26472 1073 24162 223057 177868 177868 1 KIDASQTEFEK Unmodified 1294.6405 0.64049603 614 O94979 SEC31A Protein transport protein Sec31A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.54 3 3 2 21 1 3 1 2 2 1 1 2 1 2 2 2 2 2 2 28.92 28.207 2;3 2.9603E-07 35235 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 155.97 109.51 345390000 6928100 93275000 2481800 16592000 13141000 6746200 9361800 20163000 4842200 21326000 27890000 27811000 29172000 25679000 39984000 26473 614 24163 223058;223059;223060;223061;223062;223063;223064;223065;223066;223067;223068;223069;223070;223071;223072;223073;223074;223075;223076;223077;223078;223079;223080;223081;223082;223083 177869;177870;177871;177872;177873;177874;177875;177876;177877;177878;177879;177880;177881 177873 7 KIDSEEEENELEAINRK Unmodified 2044.9913 0.99129239 4350 Q9H1H9 KIF13A Kinesin-like protein KIF13A yes yes 0 0 2 By MS/MS By MS/MS 2 0 3 2 1 57.062 50.292 3;4 0.00035738 68232 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.558 66.301 32769000 25993000 0 6775900 0 0 0 0 0 0 0 0 0 0 0 0 26474 4350 24164 223084;223085;223086 177882;177883;177884 177882 3 KIEDASNPLLLK Unmodified 1339.7711 0.77111627 1560 P49137 MAPKAPK2 MAP kinase-activated protein kinase 2 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 66.908 60.589 3 0.0074333 73464 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 46.88 33.2 46733000 4674100 42059000 0 0 0 0 0 0 0 0 0 0 0 0 0 26475 1560 24165 223087;223088;223089 177885;177886 177886 1 KIEDLGAAMEEALILDNK Unmodified 1972.0187 0.018693117 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 95.386 89.989 3 1.3068E-36 113566 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 130.56 120.56 122460000 90933000 31525000 0 0 0 0 0 0 0 0 0 0 0 0 0 26476 2344 24166 223090;223091;223092 177887;177888;177889 177889 3 KIEDLIK Unmodified 857.52222 0.52221879 561 O75935 DCTN3 Dynactin subunit 3 yes yes 0 0 1 By MS/MS 2 0 1 1 46.2 42.348 2 0.027153 53497 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 129.56 20.639 62048000 0 0 62048000 0 0 0 0 0 0 0 0 0 0 0 0 26477 561 24167 223093 177890 177890 0 KIEDLTELEGWEELEDNEK Unmodified 2318.0802 0.080166979 1613 P49916 LIG3 DNA ligase 3 yes yes 0 0 1 By MS/MS 2 0 1 1 90.218 82.087 3 0.0016998 106609 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.705 34.315 11440000 11440000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26478 1613 24168 223094 177891 177891 1 KIEDNNTLVFIVDVK Unmodified 1745.9564 0.95635086 1908 P62750 RPL23A 60S ribosomal protein L23a yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 89.203 83.353 3 0.00023137 86103 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 61.097 56.629 22153000 22153000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26479 1908 24169 223095;223096 177892;177893 177892 0 KIEEAEREAECK Unmodified 1490.7035 0.70350699 4758 Q9NZ09 UBAP1 Ubiquitin-associated protein 1 yes yes 0 0 2 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 12.087 11.695 3 0.043441 14768 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 47.712 41.235 183220000 8292300 0 42384000 9117800 8318700 10142000 9250500 11099000 7451700 12060000 0 17992000 12860000 13893000 20361000 26480 4758 24170 223097;223098;223099;223100;223101;223102;223103;223104;223105;223106;223107;223108;223109 177894;177895 177895 2 KIEEAMDGSETPQLFTVLPEK Oxidation (M) 2377.1723 0.17229323 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 2 1 2 1 2 81.277 80.159 3 4.6809E-54 92976 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 121.46 116.18 1305100000 40420000 114990000 32172000 34059000 61326000 100290000 0 0 105800000 162960000 130950000 195500000 93974000 0 232670000 26481 2290 24171 223110;223111;223112;223113;223114;223115;223116;223117;223118;223119;223120;223121;223122;223123;223124;223125 177896;177897;177898;177899;177900;177901;177902;177903;177904;177905;177906;177907;177908;177909;177910 177907 3737 15 KIEEAMDGSETPQLFTVLPEK Unmodified 2361.1774 0.1773786 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 2 1 84.37 83.203 3 4.8687E-38 96500 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 109.37 104.16 445630000 40203000 134050000 18767000 0 5585000 10448000 3711700 19128000 12662000 24290000 26177000 32839000 10842000 18875000 88046000 26482 2290 24171 223126;223127;223128;223129;223130;223131;223132;223133;223134;223135;223136;223137;223138;223139;223140;223141 177911;177912;177913;177914;177915;177916;177917;177918;177919;177920;177921;177922;177923;177924;177925;177926;177927 177926 16 KIEEFLSSFEEK Unmodified 1484.7399 0.73987572 375 O43847 NRD1 Nardilysin yes yes 0 0 1 By MS/MS 2 0 2 2 83.577 75.446 2;3 0.00087637 98559 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 114.24 77.858 62291000 62291000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26483 375 24172 223142;223143 177928;177929 177928 1 KIEEGIEFVK Unmodified 1190.6547 0.65468953 3762 Q96BP3 PPWD1 Peptidylprolyl isomerase domain and WD repeat-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 61.55 55.509 2 0.01738 68586 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 101.38 58.298 22445000 4473500 0 17971000 0 0 0 0 0 0 0 0 0 0 0 0 26484 3762 24173 223144;223145 177930;177931 177931 0 KIEEQLTLEK Unmodified 1229.6867 0.68671794 1289 P30740 SERPINB1 Leukocyte elastase inhibitor yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3.55 3.09 1 6 2 2 3 4 2 1 1 52.507 49.028 2;3 1.9163E-05 53231 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 176.48 98.335 472130000 81398000 288440000 74296000 0 0 0 0 0 0 0 0 0 0 4843000 23153000 26485 1289 24174 223146;223147;223148;223149;223150;223151;223152;223153;223154;223155;223156 177932;177933;177934;177935;177936;177937;177938;177939;177940;177941 177936 5 KIEESETIEDSSNQAAAR Unmodified 1976.9287 0.92869214 3340 Q8N573 OXR1 Oxidation resistance protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching 10 0 8 2 1 1 1 1 1 1 30.771 30.824 3 3.2536E-10 33227 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 63.918 53.721 19931000 0 0 0 2000900 0 3628600 3074600 0 1919400 5306300 0 0 4000700 0 0 26486 3340 24175 223157;223158;223159;223160;223161;223162;223163;223164 177942;177943;177944;177945 177944 4 KIEFPLPDEK Unmodified 1214.6547 0.65468953 1875 P62191 PSMC1 26S protease regulatory subunit 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 16 1 2 1 1 1 2 2 2 1 1 2 66.364 66.475 2;3 0.0044738 76085 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 128.03 98.948 113690000 0 0 0 5430200 8204600 4271500 2536500 2494700 0 16828000 23105000 32490000 2800700 2580200 12949000 26487 1875 24176 223165;223166;223167;223168;223169;223170;223171;223172;223173;223174;223175;223176;223177;223178;223179;223180 177946;177947;177948;177949;177950;177951 177948 5 KIEFPLPDRR Unmodified 1269.7194 0.71935547 1482 P43686 PSMC4 26S protease regulatory subunit 6B yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 56.524 56.617 3 0.04035 63082 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 71.349 57.231 38635000 0 0 0 4130300 0 7175700 0 0 0 0 6224300 21104000 0 0 0 26488 1482 24177 223181;223182;223183;223184 177952 177952 1 KIEFPPPNEEAR Unmodified 1425.7252 0.72522871 1876 P62195 PSMC5 26S protease regulatory subunit 8 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 46.717 47.258 3 0.038035 52442 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 23.179 16.275 28071000 0 0 0 0 0 0 0 0 0 0 9398300 9976600 0 4369700 4326300 26489 1876 24178 223185;223186;223187;223188 177953 177953 1 KIEFQPPEAK Unmodified 1185.6394 0.63937381 4287 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 51.774 45.785 3 0.0088971 63165 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.848 44.984 28178000 10243000 0 17935000 0 0 0 0 0 0 0 0 0 0 0 0 26490 4287 24179 223189;223190 177954;177955 177954 1 KIEFSLPDLEGR Unmodified 1402.7456 0.7456298 1369 P35998 PSMC2 26S protease regulatory subunit 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 81.038 81.182 3 0.0023521 93950 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 40.725 33 41555000 0 0 0 0 0 7624700 0 3180200 0 5290600 5535300 6640500 0 0 13284000 26491 1369 24180 223191;223192;223193;223194;223195;223196 177956;177957;177958;177959;177960 177957 5 KIEIGDGAELTAEFLYDEVHPK Unmodified 2473.2377 0.23767067 2884 Q6IBS0 TWF2 Twinfilin-2 yes yes 0 0 1 By MS/MS By MS/MS 2.38 0.696 1 3 4 5 3 98.174 94.512 3;4 2.2613E-88 115287 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 122.3 114.5 292980000 274730000 18251000 0 0 0 0 0 0 0 0 0 0 0 0 0 26492 2884 24181 223197;223198;223199;223200;223201;223202;223203;223204 177961;177962;177963;177964;177965;177966;177967 177966 6 KIEISQHAK Unmodified 1052.5978 0.59784335 1850 P61513 RPL37A 60S ribosomal protein L37a yes yes 0 0 1 By MS/MS 2 0 1 1 15.204 11.14 2 0.0016632 16549 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 124.74 72.488 47350000 47350000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26493 1850 24182 223205 177968;177969 177969 2 KIENIHIGEK Unmodified 1179.6612 0.66117189 128 O00203 AP3B1 AP-3 complex subunit beta-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 27.131 27.278 3 0.0085885 29178 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 44.207 19.915 51781000 0 0 0 5832400 4660800 0 0 4468300 3554600 5498800 0 0 11921000 7155100 8690800 26494 128 24183 223206;223207;223208;223209;223210;223211;223212;223213 177970;177971;177972 177971 3 KIENLCAMGFDR Oxidation (M) 1468.6803 0.68026913 1832 P61086 UBE2K Ubiquitin-conjugating enzyme E2 K yes yes 0 1 1 By MS/MS 10 0 1 1 45.95 46.002 3 0.031912 51819 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 41.996 36.336 16146000 0 0 0 0 0 16146000 0 0 0 0 0 0 0 0 0 26495 1832 24184 223214 177973 177973 0 KIENLCAMGFDR Unmodified 1452.6854 0.6853545 1832 P61086 UBE2K Ubiquitin-conjugating enzyme E2 K yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 60.8 61.067 3 0.047324 68874 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.839 30.524 30396000 0 0 0 0 0 3966200 0 2328200 1832900 0 0 4846000 6024900 0 11398000 26496 1832 24184 223215;223216;223217;223218;223219;223220 177974 177974 0 KIENLQEQLRDK Unmodified 1512.826 0.82600539 3217;250 Q8IUD2;O15083 ERC1;ERC2 ELKS/Rab6-interacting/CAST family member 1;ERC protein 2 no no 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 35.956 36.176 3 0.0013513 38358 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.536 67.433 83583000 0 0 0 6134800 0 7469800 5404300 10045000 5935700 7025200 8644500 13212000 0 0 19711000 26497 3217;250 24185 223221;223222;223223;223224;223225;223226;223227;223228;223229 177975;177976 177975 2 KIENVPTGPNNKPK Unmodified 1534.8467 0.84674083 331 O43447 PPIH Peptidyl-prolyl cis-trans isomerase H yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 18.754 18.937 3 0.011769 19260 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 54.871 42.666 57372000 0 0 0 4840700 5848300 3182400 6299700 5065100 3176500 4852200 3659200 6873400 0 4417400 9157500 26498 331 24186 223230;223231;223232;223233;223234;223235;223236;223237;223238;223239;223240 177977;177978;177979 177978 2 KIEPELDGSAQVTSHDASTNGLINFIK Unmodified 2883.4614 0.46141603 829 P06744 GPI Glucose-6-phosphate isomerase yes yes 0 0 1 By MS/MS By MS/MS 2.8 0.4 1 4 3 2 85.94 81.576 3;4 3.0874E-28 98244 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 85.423 77.971 214780000 162520000 52259000 0 0 0 0 0 0 0 0 0 0 0 0 0 26499 829 24187 223241;223242;223243;223244;223245 177980;177981;177982;177983 177982 3 KIEPELDGSSPVTSHDSSTNGLINFIK Unmodified 2884.4454 0.44543162 93 CON__Q3ZBD7 yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 2 2 3 1 87.533 81.76 3;4 3.6645E-56 104782 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 103.63 94.174 + 206440000 200290000 6157900 0 0 0 0 0 0 0 0 0 0 0 0 0 26500 93 24188 223246;223247;223248;223249 177984;177985;177986 177985 2 KIEPGTAADSQQIHEEK Unmodified 1879.9276 0.92756992 4236 Q9BXW9 FANCD2 Fanconi anemia group D2 protein yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 1 2 27.852 24.366 3;4 2.0549E-09 31029 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 78.078 65.793 64610000 0 13826000 50784000 0 0 0 0 0 0 0 0 0 0 0 0 26501 4236 24189 223250;223251;223252 177987;177988;177989;177990;177991 177990 5 KIEQDTDTK Unmodified 1076.535 0.53496832 153 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 5.7241 2.4233 2 4.9268E-07 4466 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 180.27 103.79 58923000 0 58923000 0 0 0 0 0 0 0 0 0 0 0 0 0 26502 153 24190 223253;223254 177992;177993 177992 2 KIEQELTAAK Unmodified 1129.6343 0.63428844 4390 Q9H444 CHMP4B Charged multivesicular body protein 4b yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 25.594 24.96 2 6.6123E-17 32360 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 204.34 131.55 594500000 0 261910000 210310000 10940000 4718700 3313800 8332900 5317700 4776200 6377900 11570000 20542000 5206900 15203000 25983000 26503 4390 24191 223255;223256;223257;223258;223259;223260;223261;223262;223263;223264;223265;223266;223267;223268;223269 177994;177995;177996;177997;177998;177999;178000 177998 3 KIEQQGGFTFENK Unmodified 1524.7573 0.75725712 282 O15397 IPO8 Importin-8 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 45.032 43.897 3 5.158E-05 56151 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 98.592 78.988 96217000 10050000 0 31988000 0 4223200 0 4652600 0 2797500 5716100 0 11599000 11783000 0 13407000 26504 282 24192 223270;223271;223272;223273;223274;223275;223276;223277;223278 178001;178002;178003;178004;178005;178006;178007;178008 178005 8 KIERLDTDDLDEIEK Unmodified 1830.9211 0.92108756 4655;5016 Q9NUU7;Q9UMR2 DDX19A;DDX19B ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX19B no no 0 0 2 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 4 1 2 66.14 59.934 3;4 1.7502E-81 80316 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 179.56 153.84 452140000 395810000 29644000 26679000 0 0 0 0 0 0 0 0 0 0 0 0 26505 4655;5016 24193 223279;223280;223281;223282;223283;223284;223285 178009;178010;178011;178012;178013;178014;178015;178016 178012 6 KIESFGSK Unmodified 894.48108 0.48108226 1278 P30405 PPIF Peptidyl-prolyl cis-trans isomerase F, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 17.907 14.415 2 0.020558 21382 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 129.47 36.773 365400000 310420000 0 54976000 0 0 0 0 0 0 0 0 0 0 0 0 26506 1278 24194 223286;223287 178017 178017 1 KIESFGSPK Unmodified 991.53385 0.53384611 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 1 By MS/MS 2 0 1 1 29.207 23.587 2 0.026163 33155 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.46 57.602 85815000 85815000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26507 1601 24195 223288 178018 178018 1 KIGDEYFTFITDCK Unmodified 1735.8127 0.81272309 1570 P49368 CCT3 T-complex protein 1 subunit gamma yes yes 0 0 1 By MS/MS By MS/MS By matching 2 0 3 1 1 1 86.582 81.455 3 0.01964 102647 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 26.781 20.365 44791000 23530000 19706000 1555900 0 0 0 0 0 0 0 0 0 0 0 0 26508 1570 24196 223289;223290;223291 178019;178020 178019 2 KIGEEEIQKPEEK Unmodified 1555.8094 0.80935227 2539 Q15459 SF3A1 Splicing factor 3A subunit 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.65 3.65 5 12 1 2 2 1 1 1 1 1 1 1 1 1 1 1 1 24.447 23.39 3;4 1.3631E-16 23965 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 133.48 133.48 1063600000 51028000 64637000 210660000 38986000 47533000 26940000 44783000 42531000 21772000 71691000 65564000 98816000 91998000 89372000 97260000 26509 2539 24197 223292;223293;223294;223295;223296;223297;223298;223299;223300;223301;223302;223303;223304;223305;223306;223307;223308 178021;178022;178023;178024;178025;178026;178027;178028;178029;178030;178031;178032;178033;178034;178035 178025 7 KIGQQPQQPGAPPQQDYTK Unmodified 2108.0651 0.065066458 3690 Q92945 KHSRP Far upstream element-binding protein 2 yes yes 0 0 1 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 33.284 33.505 3 0.0020727 35802 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.836 24.305 43215000 0 0 0 5337400 2618400 0 7628400 0 0 0 5889000 6996100 4251800 4752200 5741400 26510 3690 24198 223309;223310;223311;223312;223313;223314;223315;223316 178036;178037;178038;178039 178036 4 KIIEDQQESLNK Unmodified 1443.7569 0.75692277 811 P05455 SSB Lupus La protein yes yes 0 0 1 By MS/MS 2 0 1 1 31.464 27.012 2 0.010975 35368 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.156 68.413 6699400 0 6699400 0 0 0 0 0 0 0 0 0 0 0 0 0 26511 811 24199 223317 178040 178040 1 KINSWVESQTNEK Unmodified 1561.7736 0.77363546 1251;1545 P29508;P48594 SERPINB3;SERPINB4 Serpin B3;Serpin B4 no no 0 0 1 By MS/MS 10 0 1 1 36.255 35.802 3 0.015002 39979 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 20.657 14.22 5501600 0 0 0 5501600 0 0 0 0 0 0 0 0 0 0 0 26512 1251;1545 24200 223318 178041 178041 1 KIPDPDSDDVSEVDAR Unmodified 1756.8115 0.81153711 1656 P51532 SMARCA4 Transcription activator BRG1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.484 45.654 3 0.00010465 50802 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 47.113 36.325 123650000 0 0 0 11442000 7901100 12110000 7224400 7223700 6890300 7180500 13950000 15246000 9837300 7684400 16957000 26513 1656 24201 223319;223320;223321;223322;223323;223324;223325;223326;223327;223328;223329;223330 178042;178043;178044;178045;178046;178047;178048;178049;178050;178051;178052 178050 11 KIPDPDSDDVSEVDARHIIENAK Unmodified 2562.2562 0.25617428 1656 P51532 SMARCA4 Transcription activator BRG1 yes yes 0 0 2 By MS/MS 2 0 2 2 74.764 66.634 3;4 0.0033511 88094 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.235 48.185 77943000 77943000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26514 1656 24202 223331;223332 178053;178054 178054 2 KIPDTVLEK Unmodified 1041.607 0.60701105 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.14 0.639 1 4 2 3 3 1 53.439 49.707 2 0.024274 48725 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 96.668 40.546 1186100000 332850000 365820000 487430000 0 0 0 0 0 0 0 0 0 0 0 0 26515 1986 24203 223333;223334;223335;223336;223337;223338;223339 178055;178056;178057 178057 0 KIPEFEVENSPLSDVAK Unmodified 1900.9782 0.97820851 3098 Q7Z4H7 HAUS6 HAUS augmin-like complex subunit 6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 79.654 78.488 3 0.00011456 98846 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 49.141 42.16 126800000 4976700 35953000 16340000 0 3337500 5849800 2680700 6123800 4476800 7323000 6644500 7319400 3822600 5555200 16394000 26516 3098 24204 223340;223341;223342;223343;223344;223345;223346;223347;223348;223349;223350;223351;223352;223353;223354 178058;178059;178060;178061;178062;178063;178064;178065 178058 8 KIPPANGQAAAIK Unmodified 1277.7456 0.74557022 4421 Q9H6S0 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 41.312 41.768 3 0.0085013 45485 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 27.862 8.6179 89244000 0 0 0 0 0 0 0 0 0 12546000 16949000 17166000 8232900 13691000 20659000 26517 4421 24205 223355;223356;223357;223358;223359;223360 178066 178066 1 KIPQELNNITK Unmodified 1296.7402 0.74015049 4822 Q9P2N5 RBM27 RNA-binding protein 27 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 46.589 45.926 3 1.6219E-09 65220 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 128.08 110.87 127740000 39614000 0 0 0 8479200 7601300 7543100 9178300 8649500 9102300 7549000 0 0 17897000 12129000 26518 4822 24206 223361;223362;223363;223364;223365;223366;223367;223368;223369;223370 178067;178068;178069;178070;178071 178069 5 KIPQQLESK Unmodified 1069.6132 0.61315906 437 O60841 EIF5B Eukaryotic translation initiation factor 5B yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 27.258 22.995 2 2.4612E-05 32662 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 156.51 97.693 110570000 96030000 0 14543000 0 0 0 0 0 0 0 0 0 0 0 0 26519 437 24207 223371;223372 178072;178073;178074 178072 2 KIPSSFTSVDK Unmodified 1207.6449 0.64485312 2792 Q5TAX3 ZCCHC11 Terminal uridylyltransferase 4 yes yes 0 0 1 By MS/MS 2 0 1 1 50.443 42.542 2 0.018984 58674 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.496 48.144 11767000 11767000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26520 2792 24208 223373 178075 178075 1 KIPSVEDSLGEGSR Unmodified 1472.7471 0.74708636 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 47.845 47.963 3 0.029526 54433 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 25.066 9.1251 66776000 0 0 0 5061200 7503600 0 0 6770000 6474500 0 11536000 12280000 9139600 8011300 0 26521 4285 24209 223374;223375;223376;223377;223378;223379;223380;223381 178076 178076 1 KIQASTMAFK Unmodified 1123.606 0.6059652 1391 P37802 TAGLN2 Transgelin-2 yes yes 0 0 1 By MS/MS 2 0 1 1 45.257 38.265 2 0.021699 52669 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.869 44.906 18415000 18415000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26522 1391 24210 223382 178077 178077 1 KIQNDAGVR Unmodified 999.54614 0.54614213 3690;3737;3873 Q92945;Q96AE4;Q96I24 KHSRP;FUBP1;FUBP3 Far upstream element-binding protein 2;Far upstream element-binding protein 1;Far upstream element-binding protein 3 no no 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 7.0457 7.2905 2 0.037902 4647 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.205 43.082 61729000 0 0 0 0 0 0 0 5000900 0 8896100 27248000 0 0 9043400 11541000 26523 3690;3737;3873 24211 223383;223384;223385;223386;223387 178078;178079 178079 2 KITDGLHALQEASNK Unmodified 1623.858 0.8580338 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By matching By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 53.942 52.75 3 0.039808 75933 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 28.422 22.517 31144000 6233000 0 0 0 0 0 0 9906300 1867700 3318800 5142100 0 0 4675800 0 26524 643 24212 223388;223389;223390;223391;223392;223393 178080;178081 178080 2 KITDYGGDK Unmodified 995.49238 0.49237523 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 14.697 11.293 2 0.048122 14041 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 85.731 57.512 15089000 0 15089000 0 0 0 0 0 0 0 0 0 0 0 0 0 26525 528 24213 223394;223395 178082 178082 0 KITESVAETAQTIK Unmodified 1517.8301 0.83008771 3732 Q96A49 SYAP1 Synapse-associated protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 2 20 1 1 1 2 2 2 2 1 2 2 2 2 2 44.949 44.641 2;3 8.4215E-60 49775 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 217.68 137.45 347450000 0 10414000 7862200 8690100 29548000 0 33809000 31446000 10862000 19334000 51375000 50854000 49444000 21742000 22071000 26526 3732 24214 223396;223397;223398;223399;223400;223401;223402;223403;223404;223405;223406;223407;223408;223409;223410;223411;223412;223413;223414;223415;223416;223417 178083;178084;178085;178086;178087;178088;178089;178090;178091;178092;178093;178094;178095;178096;178097;178098;178099;178100;178101;178102;178103;178104 178098 20 KITESVAETAQTIKK Unmodified 1645.9251 0.92505073 3732 Q96A49 SYAP1 Synapse-associated protein 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 38.399 38.593 3 2.0612E-18 43477 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 110.55 100.48 171500000 0 0 0 18785000 13761000 0 25668000 13313000 9426200 13696000 15940000 22777000 14687000 8957300 14493000 26527 3732 24215 223418;223419;223420;223421;223422;223423;223424;223425;223426;223427;223428 178105;178106;178107;178108;178109;178110;178111;178112;178113 178112 8 KITIADCGQLE Unmodified 1246.6227 0.62273747 1931 P62937 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 53.952 52.717 2 0.00089533 65501 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 110.14 81.737 2794200000 47737000 2307900000 15798000 2536800 6970500 1799800 7994000 5533700 4411600 7888300 71561000 84198000 7981400 52450000 169390000 26528 1931 24216 223429;223430;223431;223432;223433;223434;223435;223436;223437;223438;223439;223440;223441;223442;223443;223444;223445 178114;178115;178116;178117;178118;178119;178120;178121;178122;178123 178118 9 KKDDDDEEIGGPK Unmodified 1444.6682 0.66816734 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.65 3.65 5 12 2 1 2 1 1 1 1 1 1 2 1 1 1 1 9.9574 9.1621 2;3 4.4412E-35 7497 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 143.42 119.75 2452500000 106810000 16266000 9866000 0 5300500 7647000 147360000 142000000 124160000 262280000 988270000 629730000 4623600 3664200 4548400 26529 4226 24217 223446;223447;223448;223449;223450;223451;223452;223453;223454;223455;223456;223457;223458;223459;223460;223461;223462 178124;178125;178126;178127;178128;178129;178130;178131;178132;178133;178134;178135;178136;178137 178137 8 KKDDETVDSLGPLEK Unmodified 1672.8519 0.85194536 4943 Q9UJX2 CDC23 Cell division cycle protein 23 homolog yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 44.466 43.752 3 9.4087E-05 47515 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.511 53.226 209390000 35203000 0 8775000 0 4378600 13359000 10237000 10515000 9091400 10909000 20035000 22134000 21882000 15800000 27076000 26530 4943 24218 223463;223464;223465;223466;223467;223468;223469;223470;223471;223472;223473;223474;223475 178138;178139;178140;178141;178142;178143;178144;178145;178146;178147;178148 178141 11 KKDEELSSALEK Unmodified 1375.7195 0.71947463 4063 Q99816 TSG101 Tumor susceptibility gene 101 protein yes yes 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 29.672 25.259 3 0.0060337 32211 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 65.563 50.175 70475000 28629000 0 41846000 0 0 0 0 0 0 0 0 0 0 0 0 26531 4063 24219 223476;223477 178149 178149 0 KKDPETYEVDSGTTK Unmodified 1696.8156 0.81555986 2666 Q3B726 TWISTNB DNA-directed RNA polymerase I subunit RPA43 yes yes 0 0 2 By matching By MS/MS 2 0 2 1 1 20.798 17.031 3 0.0059979 21878 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 42.947 36.331 7036200 3517400 0 3518900 0 0 0 0 0 0 0 0 0 0 0 0 26532 2666 24220 223478;223479 178150 178150 0 KKEEEATEWQHK Unmodified 1541.7474 0.74742071 1345 P35241 RDX Radixin yes yes 0 0 2 By MS/MS 2 0 1 1 14.281 10.233 3 5.9462E-07 15419 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 146.5 108.27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26533 1345 24221 223480 178151 178151 1 KKEEGVIDSSDK Unmodified 1333.6725 0.67252444 1751 P55010 EIF5 Eukaryotic translation initiation factor 5 yes yes 0 0 2 By MS/MS By matching By MS/MS 2 0 3 1 1 1 9.8638 6.7394 3 0.048924 8526 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 44.367 35.957 33775000 13701000 4955600 15118000 0 0 0 0 0 0 0 0 0 0 0 0 26534 1751 24222 223481;223482;223483 178152 178152 1 KKEPEPNFQLLDNPAR Unmodified 1894.9901 0.9901106 4011 Q99460 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 0 2 By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 2 2 2 2 1 61.719 61.865 3;4 0.017084 70598 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 41.088 34.671 143330000 0 0 0 4224300 3406300 5372600 0 2653200 10261000 21833000 25104000 50094000 12334000 0 8051300 26535 4011 24223 223484;223485;223486;223487;223488;223489;223490;223491;223492;223493;223494;223495;223496;223497 178153;178154;178155 178154 1 KKEPSVEEK Unmodified 1072.5764 0.57643921 3102 Q7Z4V5 HDGFRP2 Hepatoma-derived growth factor-related protein 2 yes yes 0 0 2 By MS/MS 2 0 1 1 5.6704 3.4653 2 6.1186E-67 5073 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 232.46 124.56 31305000 0 0 31305000 0 0 0 0 0 0 0 0 0 0 0 0 26536 3102 24224 223498 178156 178156 1 KKEPVGDDESVPENVLSFDDLTADALANLK Unmodified 3228.6038 0.60378275 1580 P49591 SARS Serine--tRNA ligase, cytoplasmic yes yes 0 0 2 By MS/MS 2 0 1 1 98.115 89.984 4 6.2137E-20 116206 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.516 67.812 101420000 101420000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26537 1580 24225 223499 178157 178157 1 KKMEDSVGCLETAEEVK Oxidation (M) 1967.918 0.91799279 1356 P35579 MYH9 Myosin-9 yes yes 0 1 2 By matching By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 39.22 39.268 3 0.0059841 43378 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 44.391 38.547 22319000 0 0 0 0 1637500 4575000 4403600 0 0 6480000 5223500 0 0 0 0 26538 1356 24226 223500;223501;223502;223503;223504 178158 178158 2080 1 KKPCSETSQIEDTPSSK Unmodified 1920.9099 0.90987095 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 16.273 15.739 3 6.2236E-07 14152 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.653 74.314 57003000 11727000 0 5502600 0 1672900 0 0 0 1112000 2026900 7719900 7290000 5933200 7067500 6951200 26539 1226 24227 223505;223506;223507;223508;223509;223510;223511;223512;223513;223514 178159;178160;178161;178162;178163;178164 178159 6 KKPEDSPSDDDVLIVYELTPTAEQK Unmodified 2816.3968 0.39675009 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 2 By MS/MS 2 0 2 2 88.093 79.963 3;4 0.00029238 104057 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 41.423 38.829 15046000 15046000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26540 1601 24228 223515;223516 178165;178166;178167 178166 3 KKPEEEGSAHQDTAEK Unmodified 1782.8384 0.83842057 5009 Q9ULW0 TPX2 Targeting protein for Xklp2 yes yes 0 0 2 By MS/MS 2 0 1 1 5.571 3.366 4 0.0075564 4978 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 40.801 27.388 74362000 0 0 74362000 0 0 0 0 0 0 0 0 0 0 0 0 26541 5009 24229 223517 178168 178168 1 KKPFMLDEEGDTQTEETQPSETK Unmodified 2667.2222 0.22215654 1099 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 0 0 2 By MS/MS By matching 2 0 3 2 1 53.844 47.131 3;4 1.919E-29 64809 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.625 80.65 29956000 21346000 0 8609900 0 0 0 0 0 0 0 0 0 0 0 0 26542 1099 24230 223518;223519;223520 178169;178170;178171;178172 178172 4 KKPLFITTDSSK Unmodified 1363.7711 0.77111627 3061 Q7LBC6 KDM3B Lysine-specific demethylase 3B yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 31.106 31.114 3 0.038607 33695 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 39.016 31.848 106030000 0 0 0 14883000 10624000 0 22710000 16167000 12396000 14703000 0 0 0 14549000 0 26543 3061 24231 223521;223522;223523;223524;223525;223526;223527 178173 178173 0 KKPNEDEVNQDSVK Unmodified 1628.8006 0.8005785 3740 Q96AT1 KIAA1143 Uncharacterized protein KIAA1143 yes yes 0 0 2 By MS/MS 2 0 1 1 13.094 10.813 3 6.8518E-09 13621 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 88.075 79.476 30717000 0 0 30717000 0 0 0 0 0 0 0 0 0 0 0 0 26544 3740 24232 223528 178174 178174 1 KKPTPIQLNPAPDGSAVNGTSSAETNLEALQK Unmodified 3275.6997 0.69974882 2079 Q02750 MAP2K1 Dual specificity mitogen-activated protein kinase kinase 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 72.47 72.633 4 1.6449E-20 83020 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.545 51.418 46194000 0 0 0 0 0 8802000 0 0 0 19224000 0 0 0 0 18168000 26545 2079 24233 223529;223530;223531 178175;178176;178177 178177 3 KLAVNMVPFPR Unmodified 1270.722 0.72199801 1963;842;4160;2350;4182;2306;2678;47 P07437;A6NNZ2;P68371;Q13509;Q13885;Q9BVA1;Q3ZCM7;Q9BUF5;CON__ENSEMBL:ENSBTAP00000025008;Q9H4B7 TUBB;TUBB4B;TUBB3;TUBB2A;TUBB2B;TUBB8;TUBB6;TUBB1 Tubulin beta chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-4B chain;Tubulin beta-3 chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-8 chain;Tubulin beta-6 chain;Tubulin beta-1 chain no no 0 0 1 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.896 74.96 3 0.003114 85651 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 50.292 41.987 + 56907000 0 0 0 2863000 1853200 1831700 2445700 2243700 3648800 3980900 4102700 15257000 3876000 3274600 11530000 26546 842;1963;2306;2350;4182;2678;4160;47 24234 223532;223533;223534;223535;223536;223537;223538;223539;223540;223541;223542;223543 178178;178179;178180;178181;178182;178183;178184;178185 178183 8 KLAVNMVPFPR Oxidation (M) 1286.7169 0.71691263 1963;842;4160;2350;4182;2306;2678;47 P07437;A6NNZ2;P68371;Q13509;Q13885;Q9BVA1;Q3ZCM7;Q9BUF5;CON__ENSEMBL:ENSBTAP00000025008;Q9H4B7 TUBB;TUBB4B;TUBB3;TUBB2A;TUBB2B;TUBB8;TUBB6;TUBB1 Tubulin beta chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-4B chain;Tubulin beta-3 chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-8 chain;Tubulin beta-6 chain;Tubulin beta-1 chain no no 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 63.112 63.213 3 0.0045525 73093 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 43.419 35.011 + 88444000 0 0 0 21209000 0 0 0 0 0 0 17493000 0 23576000 0 26166000 26547 842;1963;2306;2350;4182;2678;4160;47 24234 223544;223545;223546;223547 178186;178187 178187 40 2 KLDAGNQLALIEELHK Unmodified 1790.989 0.98904797 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 6.8 3.94 1 2 1 6 2 2 1 1 1 1 1 1 82.301 81.294 3 2.7784E-16 95693 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 114.01 103.2 151290000 28607000 59306000 0 0 0 8776700 0 3091400 7382200 5003700 0 0 0 5326200 33800000 26548 3641 24235 223548;223549;223550;223551;223552;223553;223554;223555;223556;223557 178188;178189;178190;178191;178192;178193;178194;178195;178196;178197;178198 178194 11 KLDAQVQELHAK Unmodified 1378.7569 0.75686319 1357 P35580 MYH10 Myosin-10 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.318 30.505 3 0.00036442 33788 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 52.79 44.739 85727000 0 0 0 3849900 5277400 9194700 6355300 6456100 6830300 9898300 8947400 9381900 8987300 4271100 6277300 26549 1357 24236 223558;223559;223560;223561;223562;223563;223564;223565;223566;223567;223568;223569 178199;178200;178201;178202;178203;178204;178205;178206;178207;178208;178209;178210;178211 178211 13 KLDASILEDRDK Unmodified 1401.7464 0.74635808 3660 Q92785 DPF2 Zinc finger protein ubi-d4 yes yes 0 0 2 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 45.753 45.914 3 0.046044 50322 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.732 37.813 70399000 0 0 0 3033000 0 10695000 0 7102000 8775400 8735900 0 0 8974200 4572700 18510000 26550 3660 24237 223570;223571;223572;223573;223574;223575;223576;223577 178212 178212 0 KLDDQSEDEALELEGPLITPGSGSIYSSPGLYSK Unmodified 3594.7465 0.74648382 3735 Q96AC1 FERMT2 Fermitin family homolog 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 4 3 1 92.275 85.559 3;4 1.9722E-33 110203 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.261 78.333 84211000 61507000 0 22704000 0 0 0 0 0 0 0 0 0 0 0 0 26551 3735 24238 223578;223579;223580;223581 178213;178214;178215;178216 178214 4 KLDEAVAEAHLGK Unmodified 1379.7409 0.74087877 1164 P23526 AHCY Adenosylhomocysteinase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 4.56 3.71 2 6 3 5 6 3 2 1 1 1 2 52.954 50.502 2;3 3.5141E-25 95563 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 184.65 154.51 3905600000 1497400000 993910000 1124000000 0 0 0 0 0 0 0 1586300 3612800 0 0 284980000 26552 1164 24239 223582;223583;223584;223585;223586;223587;223588;223589;223590;223591;223592;223593;223594;223595;223596;223597 178217;178218;178219;178220;178221;178222;178223;178224;178225;178226;178227;178228;178229;178230;178231;178232 178224 11 KLDEDASPNEEK Unmodified 1373.6311 0.63105355 4321 Q9H0B6 KLC2 Kinesin light chain 2 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 11.774 11.915 3 0.0023521 10886 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 40.725 30.603 44004000 0 0 0 0 4302100 3383500 3939100 0 0 5336400 0 10679000 7447400 3626100 5290700 26553 4321 24240 223598;223599;223600;223601;223602;223603;223604;223605 178233;178234;178235;178236;178237 178237 4 KLDEDSLTK Unmodified 1047.5448 0.54480473 2227 Q13043 STK4 Serine/threonine-protein kinase 4;Serine/threonine-protein kinase 4 37kDa subunit;Serine/threonine-protein kinase 4 18kDa subunit yes yes 0 0 1 By MS/MS 3 0 1 1 25.75 21.614 2 0.023518 27145 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 119.68 46.42 13924000 0 13924000 0 0 0 0 0 0 0 0 0 0 0 0 0 26554 2227 24241 223606 178238 178238 0 KLDEQYQK Unmodified 1050.5346 0.53457439 1856 P61758 VBP1 Prefoldin subunit 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 12.389 9.156 2 0.00012969 12372 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 194.2 102.29 492960000 58280000 419680000 15000000 0 0 0 0 0 0 0 0 0 0 0 0 26555 1856 24242 223607;223608;223609;223610 178239;178240;178241;178242 178239 1 KLDIVEDSIYIAYGPNGK Unmodified 1994.0361 0.03605774 4639 Q9NTZ6 RBM12 RNA-binding protein 12 yes yes 0 0 1 By MS/MS 2 0 1 1 88.81 80.679 3 0.00011779 104859 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.222 37.691 10603000 10603000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26556 4639 24243 223611 178243 178243 1 KLDPAQSASR Unmodified 1071.5673 0.5672715 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 10.456 10.597 2 0.049449 8655 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.376 53.751 54450000 0 0 0 4298600 1917700 5259100 3884700 2356900 3236800 4284900 892870 7653700 4428600 6794300 9442100 26557 2344 24244 223612;223613;223614;223615;223616;223617;223618;223619;223620;223621;223622;223623 178244 178244 0 KLDPELHLDIK Unmodified 1319.7449 0.74490152 2206 Q12905 ILF2 Interleukin enhancer-binding factor 2 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 62.75 63.117 3 0.0025437 70939 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.863 25.454 20116000 0 0 0 0 0 0 0 0 0 0 0 0 5029600 0 15086000 26558 2206 24245 223624;223625 178245 178245 1 KLDPGSEETQTLVR Unmodified 1571.8155 0.81550028 1211 P26641 EEF1G Elongation factor 1-gamma yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 2 2 1 2 1 1 2 2 2 1 43.22 43.351 2;3 0.00015715 47845 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 69.045 52.78 286390000 0 0 0 23989000 14614000 18609000 24422000 8665800 0 24854000 41856000 52302000 0 35087000 41990000 26559 1211 24246 223626;223627;223628;223629;223630;223631;223632;223633;223634;223635;223636;223637;223638;223639;223640;223641 178246;178247;178248;178249;178250;178251;178252;178253;178254;178255;178256 178253 11 KLDPGWNPQIPEK Unmodified 1520.7987 0.798728 4103 Q9BR61 ACBD6 Acyl-CoA-binding domain-containing protein 6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 60.374 60.703 3 0.02816 68483 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 18.789 8.989 46487000 0 0 0 0 0 0 0 21452000 0 0 0 5411600 4819000 4169500 10635000 26560 4103 24247 223642;223643;223644;223645;223646 178257 178257 1 KLDSELTAR Unmodified 1031.5611 0.56112349 417 O60610 DIAPH1 Protein diaphanous homolog 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.353 23.557 2 0.020967 25280 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 110.38 64.36 270300000 0 0 0 16436000 15343000 23905000 18644000 15487000 10343000 28577000 17430000 37078000 28311000 22686000 36059000 26561 417 24248 223647;223648;223649;223650;223651;223652;223653;223654;223655;223656;223657;223658 178258;178259;178260 178258 0 KLDVEEPDSANSSFYSTR Unmodified 2043.9385 0.93852854 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.648 56.768 3 3.1353E-15 64573 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 92.307 73.548 120570000 0 0 0 4213400 7520800 12499000 9252800 10017000 8455200 9840200 10201000 16328000 8723400 7917900 15605000 26562 2459 24249 223659;223660;223661;223662;223663;223664;223665;223666;223667;223668;223669;223670 178261;178262;178263;178264;178265;178266;178267;178268;178269;178270;178271;178272;178273;178274 178261 14 KLDYGQHVVAGTPGR Unmodified 1596.8372 0.83723877 1400 P38919 EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.445 35.626 3 0.00010985 37867 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.022 53.144 279590000 0 0 0 14907000 11353000 23108000 18873000 21336000 15379000 20051000 28979000 49680000 28550000 14724000 32654000 26563 1400 24250 223671;223672;223673;223674;223675;223676;223677;223678;223679;223680;223681;223682 178275;178276;178277;178278;178279;178280;178281;178282;178283;178284;178285 178278 11 KLEAAEER Unmodified 944.49271 0.49270958 1043;3705 P16949;Q9H169;Q93045 STMN1;STMN4;STMN2 Stathmin;Stathmin-4;Stathmin-2 no no 0 0 1 By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 6.9565 7.1522 2 0.041921 4484 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 144.38 57.053 174680000 0 0 0 0 0 0 10172000 6985200 4535900 3494900 46725000 19695000 4480800 23252000 55344000 26564 1043;3705 24251 223683;223684;223685;223686;223687;223688;223689;223690;223691 178286 178286 1 KLEADSLEVK Unmodified 1130.6183 0.61830402 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 1 By MS/MS 3 0 1 1 42.224 37.486 2 0.040676 46898 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 76.228 15.066 36662000 0 36662000 0 0 0 0 0 0 0 0 0 0 0 0 0 26565 2495 24252 223692 178287 178287 0 KLEDAATYLSLPSTK Unmodified 1635.872 0.87195252 2386 Q14185 DOCK1 Dedicator of cytokinesis protein 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 8.33 3.13 1 1 7 1 1 1 1 1 1 1 1 1 73.707 73.06 3 0.004346 88370 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 47.639 34.521 32335000 0 4810300 3128200 0 3096900 3471600 2924200 2479900 0 4766300 3129100 0 0 4528600 0 26566 2386 24253 223693;223694;223695;223696;223697;223698;223699;223700;223701 178288;178289;178290;178291 178289 4 KLEDGPK Unmodified 785.42832 0.42831841 1960 P68104;Q5VTE0 EEF1A1;EEF1A1P5 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.77 5 2 11 2 4 1 1 1 1 1 1 1 1 1 1 1 1 4.0028 2.8419 2 1.9237E-15 2229 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 172.15 102.76 36325000000 2528800000 33064000000 443670000 22748000 41043 0 47683000 37363000 28309000 30866000 31774000 31883000 22521000 13171000 22249000 26567 1960 24254 223702;223703;223704;223705;223706;223707;223708;223709;223710;223711;223712;223713;223714;223715;223716;223717;223718;223719 178292;178293;178294;178295;178296;178297;178298;178299;178300;178301;178302;178303 178292 9 KLEDLELK Unmodified 986.56481 0.56481189 2610 Q16537 PPP2R5E Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 50.279 44.649 2 0.026138 55755 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 115.7 11.333 84393000 18067000 39403000 26922000 0 0 0 0 0 0 0 0 0 0 0 0 26568 2610 24255 223720;223721;223722;223723 178304;178305;178306 178305 1 KLEDLLEK Unmodified 986.56481 0.56481189 3580 Q8WX92 NELFB Negative elongation factor B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.429 49.588 2 0.02083 56240 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 148.27 24.818 441920000 0 0 0 28613000 14691000 48251000 28189000 38276000 25627000 35699000 46812000 43527000 45494000 31430000 55313000 26569 3580 24256 223724;223725;223726;223727;223728;223729;223730;223731;223732;223733;223734;223735 178307;178308 178307 1 KLEDSTRETQSQLETER Unmodified 2048.9974 0.9974404 1029 P15924 DSP Desmoplakin yes yes 0 0 2 By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 6 1 1 1 1 1 1 29.724 29.899 3 0.0092991 32309 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 41.554 31.766 29986000 0 0 0 5449700 0 0 2626200 9942300 2235100 0 0 7454300 0 2278500 0 26570 1029 24257 223736;223737;223738;223739;223740;223741 178309 178309 1 KLEEAASRAAEEEK Unmodified 1559.7791 0.77911477 4890 Q9UH65 SWAP70 Switch-associated protein 70 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 25.66 21.228 2;3 0.015268 30248 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.652 8.2136 193440000 52646000 22240000 118550000 0 0 0 0 0 0 0 0 0 0 0 0 26571 4890 24258 223742;223743;223744;223745 178310;178311;178312 178311 3 KLEEEEAEVK Unmodified 1202.603 0.60304789 4326 Q9H0E9 BRD8 Bromodomain-containing protein 8 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 18.505 18.577 2 0.0041899 19112 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 125.74 95.124 63344000 0 0 0 6255300 5755600 7769200 5551900 7030900 4942700 8090100 0 0 10244000 7704300 0 26572 4326 24259 223746;223747;223748;223749;223750;223751;223752;223753;223754 178313;178314 178314 1 KLEEEGEQFVK Unmodified 1334.6718 0.67179615 1136 P22307 SCP2 Non-specific lipid-transfer protein yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 44.266 39.254 2 8.0133E-05 51279 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.52 67.48 26307000 0 26307000 0 0 0 0 0 0 0 0 0 0 0 0 0 26573 1136 24260 223755;223756 178315;178316;178317 178315 3 KLEEELEGMRR Unmodified 1388.7082 0.70819844 1029 P15924 DSP Desmoplakin yes yes 0 0 2 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 39.503 39.651 3 0.033556 44176 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 56.359 50.127 117830000 0 0 0 25200000 1176400 10627000 0 32560000 8578600 8129400 0 12626000 2921300 0 16011000 26574 1029 24261 223757;223758;223759;223760;223761;223762;223763;223764;223765 178318 178318 0 KLEEEQIILEDQNCK Unmodified 1887.9248 0.92479273 1356 P35579 MYH9 Myosin-9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.7 2.91 4 1 25 3 1 1 2 2 2 2 3 2 2 2 2 2 2 2 57.055 56.292 2;3 0 63398 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 338.79 323.04 3737900000 55313000 58273000 16254000 195090000 225990000 322070000 247990000 240000000 213410000 357070000 290710000 406530000 385590000 292010000 431640000 26575 1356 24262 223766;223767;223768;223769;223770;223771;223772;223773;223774;223775;223776;223777;223778;223779;223780;223781;223782;223783;223784;223785;223786;223787;223788;223789;223790;223791;223792;223793;223794;223795 178319;178320;178321;178322;178323;178324;178325;178326;178327;178328;178329;178330;178331;178332;178333;178334;178335;178336;178337;178338;178339;178340;178341;178342;178343;178344;178345;178346;178347;178348;178349;178350;178351;178352;178353;178354;178355;178356;178357;178358;178359 178353 30 KLEEEVSK Unmodified 960.51278 0.51277632 3509 Q8TDY2 RB1CC1 RB1-inducible coiled-coil protein 1 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 13.24 9.8818 2 0.033719 12512 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 103.55 44.565 16298000 0 16298000 0 0 0 0 0 0 0 0 0 0 0 0 0 26576 3509 24263 223796;223797 178360 178360 0 KLEEFQK Unmodified 920.49673 0.49673232 6 A0MZ66 KIAA1598 Shootin-1 yes yes 0 0 1 By MS/MS 3 0 1 1 22.112 18.224 2 1.2482E-06 22799 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 184.89 29.076 41957000 0 41957000 0 0 0 0 0 0 0 0 0 0 0 0 0 26577 6 24264 223798 178361 178361 0 KLEEHEESLVGR Unmodified 1424.726 0.72595699 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 26.401 26.859 3 0.042445 28169 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 24.935 2.461 15969000 0 0 0 0 0 0 0 0 0 0 5244700 5710200 2264800 2748900 0 26578 2446 24265 223799;223800;223801;223802 178362 178362 1 KLEEILPLGPNK Unmodified 1349.7919 0.79185171 3815 Q96EK7 FAM120B Constitutive coactivator of peroxisome proliferator-activated receptor gamma yes yes 0 0 1 By MS/MS 2 0 1 1 79.484 71.354 3 0.013522 93709 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 34.75 25.462 16337000 16337000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26579 3815 24266 223803 178363 178363 1 KLEEIPK Unmodified 855.50657 0.50656873 130 O00232 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.76 3.47 3 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 23.101 21.958 2 0.033953 28826 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 157.58 43.69 2280400000 44148000 1087500000 219100000 60973000 64882000 99751000 35765000 24299000 27201000 108980000 158290000 204250000 33765000 32036000 79468000 26580 130 24267 223804;223805;223806;223807;223808;223809;223810;223811;223812;223813;223814;223815;223816;223817;223818;223819;223820 178364;178365;178366;178367 178367 0 KLEELELDEQQK Unmodified 1500.7672 0.7671531 1373 P36507 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.73 2.84 3 2 25 3 2 2 2 2 2 2 2 2 2 3 2 2 2 47.118 46.201 2;3 1.1027E-13 64232 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 134.38 96.833 1049300000 84682000 170240000 0 36531000 31218000 83661000 63311000 46825000 45572000 66352000 71225000 85976000 91910000 56917000 114930000 26581 1373 24268 223821;223822;223823;223824;223825;223826;223827;223828;223829;223830;223831;223832;223833;223834;223835;223836;223837;223838;223839;223840;223841;223842;223843;223844;223845;223846;223847;223848;223849;223850 178368;178369;178370;178371;178372;178373;178374;178375;178376;178377;178378;178379;178380;178381;178382;178383;178384;178385;178386;178387;178388;178389 178378 22 KLEELELDEQQRK Unmodified 1656.8683 0.86826413 2079 Q02750 MAP2K1 Dual specificity mitogen-activated protein kinase kinase 1 yes yes 0 0 2 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40.327 39.65 3 1.2711E-123 42199 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 212.69 188.41 522880000 51194000 0 1747100 34162000 12688000 58013000 30410000 27050000 21954000 43857000 42341000 59275000 38604000 34458000 67133000 26582 2079 24269 223851;223852;223853;223854;223855;223856;223857;223858;223859;223860;223861;223862;223863;223864 178390;178391;178392;178393;178394;178395;178396;178397;178398;178399;178400;178401;178402 178394 9 KLEELEQK Unmodified 1015.555 0.55497548 1448 P42224 STAT1 Signal transducer and activator of transcription 1-alpha/beta yes yes 0 0 1 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By matching 7.87 3.54 4 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 18.503 17.576 2 0.0096965 17920 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 125.47 3.889 263510000 27691000 113540000 50563000 3921600 3081900 7363100 4899200 3815500 4055000 6517600 8251300 0 7147300 8751700 13908000 26583 1448 24270 223865;223866;223867;223868;223869;223870;223871;223872;223873;223874;223875;223876;223877;223878;223879 178403;178404;178405 178403 0 KLEELLIK Unmodified 984.62193 0.62193284 3038 Q7KZ85 SUPT6H Transcription elongation factor SPT6 yes yes 0 0 1 By MS/MS 2 0 1 1 69.58 61.294 2 0.037315 81788 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 112.41 15.378 37884000 37884000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26584 3038 24271 223880 178406 178406 1 KLEELQQK Unmodified 1014.571 0.5709599 1419 P40763 STAT3 Signal transducer and activator of transcription 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15.144 14.576 2 3.5521E-27 19357 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 212.2 65.932 426610000 34512000 126060000 45508000 13484000 7434500 24568000 14284000 13361000 8663300 22437000 26199000 18843000 20883000 19827000 30552000 26585 1419 24272 223881;223882;223883;223884;223885;223886;223887;223888;223889;223890;223891;223892;223893;223894;223895 178407;178408;178409;178410;178411;178412;178413;178414 178408 4 KLEEVVNK Unmodified 957.5495 0.54949617 3536 Q8WU90 ZC3H15 Zinc finger CCCH domain-containing protein 15 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 19.942 16.786 2 0.001261 21266 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 193.29 100.8 50431000 0 15480000 34952000 0 0 0 0 0 0 0 0 0 0 0 0 26586 3536 24273 223896;223897 178415 178415 0 KLEEVVQILGDK Unmodified 1369.7817 0.78168095 4238 Q9BY32 ITPA Inosine triphosphate pyrophosphatase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS 6.31 3.99 6 7 2 2 2 1 1 1 1 1 1 1 76.604 74.327 2;3 0.00095876 96274 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.069 70.148 284500000 111220000 116780000 22090000 0 0 7018600 2197400 0 2093800 0 4092800 4667600 0 3494800 10837000 26587 4238 24274 223898;223899;223900;223901;223902;223903;223904;223905;223906;223907;223908;223909;223910 178416;178417;178418;178419;178420;178421 178418 3 KLEGELTEEVEMAK Unmodified 1604.7967 0.79673867 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 70.051 62.983 3 0.0028491 80818 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 56.937 36.556 47528000 13589000 33939000 0 0 0 0 0 0 0 0 0 0 0 0 0 26588 2431 24275 223911;223912 178422;178423 178422 2 KLEGELTEEVEMAK Oxidation (M) 1620.7917 0.79165329 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 1 1 By MS/MS By MS/MS 2 0 4 2 2 61.521 55.48 2;3 0.0047507 74846 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 44.807 32.18 29089000 18675000 0 10414000 0 0 0 0 0 0 0 0 0 0 0 0 26589 2431 24275 223913;223914;223915;223916 178424;178425 178424 3995 2 KLEGGQQVGMHSK Unmodified 1397.7085 0.70853279 3496 Q8TD19 NEK9 Serine/threonine-protein kinase Nek9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 12.983 12.046 3 3.0881E-11 18838 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.059 76.418 101050000 87591000 0 1977200 0 0 1967700 0 0 0 0 0 2715400 2282200 0 4519500 26590 3496 24276 223917;223918;223919;223920;223921;223922 178426;178427;178428 178427 3 KLEGNSPQGSNQGVK Unmodified 1541.7798 0.77978347 1824 P61006 RAB8A Ras-related protein Rab-8A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.89 2.72 3 1 24 1 2 1 3 2 2 2 2 2 2 1 2 2 2 2 10.009 9.8533 2;3 2.6595E-08 6342 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 90.853 71.778 788400000 0 21187000 0 52002000 35551000 43361000 65603000 48603000 25643000 51427000 153320000 108470000 67310000 49612000 66307000 26591 1824 24277 223923;223924;223925;223926;223927;223928;223929;223930;223931;223932;223933;223934;223935;223936;223937;223938;223939;223940;223941;223942;223943;223944;223945;223946;223947;223948;223949;223950 178429;178430;178431;178432;178433;178434;178435;178436;178437;178438;178439;178440;178441;178442;178443;178444;178445 178438 15 KLELSDNR Unmodified 973.51926 0.51925868 1404 P39687 ANP32A Acidic leucine-rich nuclear phosphoprotein 32 family member A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.049 18.237 2 1.9345E-06 18825 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 160.63 53.201 409130000 0 0 0 18253000 19449000 13508000 21943000 21003000 13161000 20527000 45560000 58319000 29001000 36550000 111850000 26592 1404 24278 223951;223952;223953;223954;223955;223956;223957;223958;223959;223960;223961;223962 178446;178447;178448;178449;178450;178451;178452;178453;178454;178455;178456 178456 8 KLELSDNRVSGGLEVLAEK Unmodified 2056.1164 0.11643333 1404 P39687 ANP32A Acidic leucine-rich nuclear phosphoprotein 32 family member A yes yes 0 0 2 By MS/MS By MS/MS 2.25 0.829 1 1 2 3 1 86.758 84.236 3;4 3.8956E-13 95513 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 105.79 71.391 84960000 82784000 2175700 0 0 0 0 0 0 0 0 0 0 0 0 0 26593 1404 24279 223963;223964;223965;223966 178457;178458;178459 178458 3 KLELSENR Unmodified 987.53491 0.53490874 3651 Q92688 ANP32B Acidic leucine-rich nuclear phosphoprotein 32 family member B yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 19.035 19.341 2 0.0021204 20207 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 152.47 64.716 566030000 0 0 0 0 0 32508000 0 41319000 27341000 56916000 70570000 107970000 67647000 52020000 109740000 26594 3651 24280 223967;223968;223969;223970;223971;223972;223973;223974;223975 178460;178461;178462;178463;178464;178465 178460 1 KLELSHEYK Unmodified 1145.6081 0.60807369 4517 Q9HCK8 CHD8 Chromodomain-helicase-DNA-binding protein 8 yes yes 0 0 1 By MS/MS 10 0 1 1 21.636 22.297 3 0.013035 22745 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 43.651 28.713 17456000 0 0 0 0 0 0 0 0 0 0 0 17456000 0 0 0 26595 4517 24281 223976 178466 178466 1 KLEMATNK Unmodified 933.49535 0.49535211 4890 Q9UH65 SWAP70 Switch-associated protein 70 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 14.289 11.011 2 2.3713E-08 16528 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 203.55 91.818 391790000 310150000 47924000 33712000 0 0 0 0 0 0 0 0 0 0 0 0 26596 4890 24282 223977;223978;223979;223980 178467;178468;178469 178469 1 KLEMATNK Oxidation (M) 949.49027 0.49026674 4890 Q9UH65 SWAP70 Switch-associated protein 70 yes yes 0 1 1 By MS/MS 2 0 1 1 0.42163 -1.7309 2 0.033225 349 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 76.679 24.892 4253500 0 0 4253500 0 0 0 0 0 0 0 0 0 0 0 0 26597 4890 24282 223981 178470 178470 0 KLEMDLK Unmodified 875.47864 0.47863942 1356 P35579 MYH9 Myosin-9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 35.967 34.975 2 0.015812 48424 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.3 23.009 1615600000 131980000 204600000 0 0 0 169290000 129780000 125070000 124580000 141910000 257790000 329100000 0 1473400 0 26598 1356 24283 223982;223983;223984;223985;223986;223987;223988;223989;223990;223991 178471;178472 178471 0 KLENCNYAVELGK Unmodified 1536.7606 0.76062794 986;985 P13797;P13796 PLS3;LCP1 Plastin-3;Plastin-2 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.1 3.37 6 1 22 2 3 2 2 2 2 2 1 1 2 2 2 2 2 2 48.541 47.266 2;3 1.4212E-21 52227 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 142.83 0 1187500000 68120000 316310000 264900000 32341000 18190000 35358000 22268000 11927000 11517000 40569000 88936000 63069000 29889000 53153000 130910000 26599 986;985 24284 223992;223993;223994;223995;223996;223997;223998;223999;224000;224001;224002;224003;224004;224005;224006;224007;224008;224009;224010;224011;224012;224013;224014;224015;224016;224017;224018;224019;224020 178473;178474;178475;178476;178477;178478;178479;178480;178481;178482;178483;178484;178485;178486;178487;178488;178489;178490;178491;178492;178493;178494;178495;178496;178497;178498;178499;178500;178501 178499 19 KLENDTISK Unmodified 1046.5608 0.56078914 2598 Q16204 CCDC6 Coiled-coil domain-containing protein 6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 12.324 11.606 2 3.085E-05 9577 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 135.55 59.695 563850000 10147000 273190000 17979000 16691000 14889000 18275000 17371000 15812000 14610000 31310000 18827000 28396000 23601000 27761000 34991000 26600 2598 24285 224021;224022;224023;224024;224025;224026;224027;224028;224029;224030;224031;224032;224033;224034;224035;224036 178502;178503;178504;178505;178506;178507;178508;178509;178510;178511;178512;178513 178511 5 KLENEVEQR Unmodified 1143.5884 0.58840088 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 13.819 13.981 2;3 2.4334E-27 12570 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 204.91 141.34 722510000 0 0 0 40507000 43165000 37042000 37465000 29138000 23323000 88435000 70710000 85930000 75457000 68902000 122440000 26601 965 24286 224037;224038;224039;224040;224041;224042;224043;224044;224045;224046;224047;224048;224049;224050;224051;224052;224053;224054;224055;224056;224057;224058;224059;224060 178514;178515;178516;178517;178518;178519;178520;178521;178522;178523;178524;178525;178526;178527 178517 5 KLEPILK Unmodified 839.54804 0.54803961 3758 Q96BJ3 AIDA Axin interactor, dorsalization-associated protein yes yes 0 0 1 By MS/MS 2 0 1 1 46.079 39.088 2 0.035488 53630 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 126.28 30.926 42034000 42034000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26602 3758 24287 224061 178528 178528 0 KLEPLSQDEDQHADLTQSR Unmodified 2209.0611 0.061103292 1569 P49366 DHPS Deoxyhypusine synthase yes yes 0 0 1 By MS/MS 10 0 2 2 42.134 42.877 3;4 2.6076E-42 46917 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 122.53 108.9 37367000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37367000 26603 1569 24288 224062;224063 178529;178530 178529 2 KLEPVVFEK Unmodified 1087.6277 0.6277465 3535 Q8WU79 SMAP2 Stromal membrane-associated protein 2 yes yes 0 0 1 By MS/MS By matching By MS/MS 2 0 3 1 1 1 59.166 53.175 2 0.032086 72614 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.496 50.937 56359000 38823000 10782000 6754000 0 0 0 0 0 0 0 0 0 0 0 0 26604 3535 24289 224064;224065;224066 178531;178532 178531 1 KLESFYIQK Unmodified 1154.6336 0.63356015 845 P07686 HEXB Beta-hexosaminidase subunit beta;Beta-hexosaminidase subunit beta chain B;Beta-hexosaminidase subunit beta chain A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.55 47.713 2 0.03167 54597 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 100.02 41.202 53281000 0 0 0 9745900 1637800 3619000 2399700 5129900 2694500 3948600 4473100 7544200 3282900 3272800 5532200 26605 845 24290 224067;224068;224069;224070;224071;224072;224073;224074;224075;224076;224077;224078 178533 178533 1 KLESPPPSTNPFLEDEPTPEMEELATEK Unmodified 3154.4904 0.49039248 2805 Q5VIR6 VPS53 Vacuolar protein sorting-associated protein 53 homolog yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 87.611 82.329 3 3.2451E-12 105086 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.212 70.959 12069000 9698500 0 2370800 0 0 0 0 0 0 0 0 0 0 0 0 26606 2805 24291 224079;224080 178534;178535 178534 2 KLETAGEFVDDGTETHFSIGNHDCYIK Unmodified 3082.3978 0.3978295 4677 Q9NVQ4 FAIM Fas apoptotic inhibitory molecule 1 yes yes 0 0 1 By MS/MS 2 0 1 1 80.428 72.297 5 0.03186 94923 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 11.385 6.4071 12270000 12270000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26607 4677 24292 224081 178536 178536 1 KLETLSLNNNHLR Unmodified 1550.8529 0.85288884 3378 Q8N9N7 LRRC57 Leucine-rich repeat-containing protein 57 yes yes 0 0 1 By MS/MS 10 0 1 1 45.439 46.18 3 0.011093 50902 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.61 26.155 8339200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8339200 26608 3378 24293 224082 178537 178537 1 KLEVNEAELLR Unmodified 1312.7351 0.73506511 2911 Q6NZI2 PTRF Polymerase I and transcript release factor yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.318 62.415 3 0.00011773 71320 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 87.777 63.926 267960000 0 0 0 14201000 14393000 21092000 16760000 17799000 13692000 26719000 26216000 36732000 23278000 20097000 36978000 26609 2911 24294 224083;224084;224085;224086;224087;224088;224089;224090;224091;224092;224093;224094 178538;178539;178540;178541;178542;178543;178544;178545;178546;178547;178548;178549 178540 5 KLEYDSGSLK Unmodified 1138.587 0.58700389 3432 Q8NEY1 NAV1 Neuron navigator 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 29.492 29.588 2 0.02376 31545 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 78.939 38.872 28582000 0 0 0 2495100 2681900 0 5941000 0 0 0 5433800 0 0 0 12030000 26610 3432 24295 224095;224096;224097;224098;224099 178550;178551 178551 2 KLGALTAEEIALK Unmodified 1355.8024 0.8024164 2324 Q13601 KRR1 KRR1 small subunit processome component homolog yes yes 0 0 1 By MS/MS 2 0 1 1 78.672 70.541 3 0.00509 92673 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.199 39.568 11298000 11298000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26611 2324 24296 224100 178552 178552 1 KLGELTGTVK Unmodified 1044.6179 0.61791009 346 O43615 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 31.3 31.663 2 0.036018 33805 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 83.456 30.589 79079000 0 0 0 0 0 2722400 0 8211400 0 8804000 12270000 19592000 14102000 0 13377000 26612 346 24297 224101;224102;224103;224104;224105;224106;224107 178553 178553 0 KLGEMWNNLNDSEK Unmodified 1676.7828 0.78281994 274 O15347 HMGB3 High mobility group protein B3 yes yes 0 0 1 By MS/MS 2 0 1 1 69.384 61.099 3 0.0051834 81620 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.595 39.944 12586000 12586000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26613 274 24298 224108 178554 178554 1 KLGEMWNNLNDSEK Oxidation (M) 1692.7777 0.77773456 274 O15347 HMGB3 High mobility group protein B3 yes yes 0 1 1 By MS/MS 2 0 1 1 53.519 45.455 3 0.0062389 62614 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.958 28.917 15404000 15404000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26614 274 24298 224109 178555 178555 361 0 KLGEMWNNTAADDK Unmodified 1591.7301 0.73005609 883 P09429;B2RPK0 HMGB1;HMGB1P1 High mobility group protein B1;Putative high mobility group protein B1-like 1 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 44.517 43.957 3 0.00018066 49743 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 47.345 41.263 470180000 339140000 0 0 8698100 7645500 0 11833000 14707000 0 9364100 28391000 10843000 10143000 8703100 20711000 26615 883 24299 224110;224111;224112;224113;224114;224115;224116;224117;224118;224119;224120 178556;178557;178558;178559;178560;178561;178562 178561 6 KLGEMWNNTAADDK Oxidation (M) 1607.725 0.72497071 883 P09429;B2RPK0 HMGB1;HMGB1P1 High mobility group protein B1;Putative high mobility group protein B1-like 1 yes no 0 1 1 By MS/MS By matching By MS/MS 2 0 4 2 1 1 38.036 32.668 2;3 1.1789E-12 45482 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 122.78 117.88 126660000 109970000 13270000 3422600 0 0 0 0 0 0 0 0 0 0 0 0 26616 883 24299 224121;224122;224123;224124 178563;178564 178564 1137 1 KLGEMWSEQSAK Unmodified 1392.6708 0.6707503 1207 P26583 HMGB2 High mobility group protein B2 yes yes 0 0 1 By MS/MS 2 0 2 2 51.439 43.477 2;3 0.003314 59805 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.726 45.039 89812000 89812000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26617 1207 24300 224125;224126 178565;178566;178567 178566 3 KLGEMWSEQSAK Oxidation (M) 1408.6657 0.66566492 1207 P26583 HMGB2 High mobility group protein B2 yes yes 0 1 1 By MS/MS 2 0 1 1 37.131 30.634 3 0.012201 43093 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.28 28.747 44065000 44065000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26618 1207 24300 224127 178568 178568 1762 0 KLGGSLADSYLDEGFLLDK Unmodified 2040.0415 0.041537049 1980 P78371 CCT2 T-complex protein 1 subunit beta yes yes 0 0 1 By MS/MS By MS/MS 2.67 0.471 1 2 2 1 91.807 86.846 3 1.2961E-05 110474 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.09 62.807 93813000 90413000 3400500 0 0 0 0 0 0 0 0 0 0 0 0 0 26619 1980 24301 224128;224129;224130 178569;178570;178571;178572 178572 4 KLGGTIDDCELVEGLVLTQK Unmodified 2187.1457 0.14568454 1642 P50991 CCT4 T-complex protein 1 subunit delta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.5 0.5 2 2 2 1 1 90.38 86.045 3 6.4639E-07 109151 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.398 46.089 62376000 59141000 1654500 1580600 0 0 0 0 0 0 0 0 0 0 0 0 26620 1642 24302 224131;224132;224133;224134 178573;178574;178575;178576;178577;178578 178576 5 KLGNNCVFAPADVTSEK Unmodified 1848.904 0.90399771 4051 Q99714 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 64.107 58.074 3 0.00064744 78166 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.712 53.74 29465000 26953000 0 2511700 0 0 0 0 0 0 0 0 0 0 0 0 26621 4051 24303 224135;224136 178579 178579 1 KLIQESDQHLK Unmodified 1337.7303 0.73031409 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.62 1.7 1 20 1 1 1 1 2 2 1 2 2 2 2 2 2 20.554 20.531 2;3 2.1212E-05 21370 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 113.27 95.002 1092000000 48860000 0 0 109680000 107230000 42930000 149220000 84719000 32416000 74783000 79321000 114290000 81082000 102370000 65088000 26622 213 24304 224137;224138;224139;224140;224141;224142;224143;224144;224145;224146;224147;224148;224149;224150;224151;224152;224153;224154;224155;224156;224157 178580;178581;178582;178583;178584;178585;178586;178587;178588;178589;178590;178591;178592;178593;178594 178594 12 KLITDEFVK Unmodified 1091.6227 0.62266112 5031 Q9UNF1;Q12816 MAGED2;TRO Melanoma-associated antigen D2;Trophinin yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 56.802 55.73 2 0.017855 63047 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 100.25 54.91 230830000 74041000 13234000 0 6988000 7917700 0 10136000 8821300 0 15601000 22555000 19551000 20816000 9866000 21301000 26623 5031 24305 224158;224159;224160;224161;224162;224163;224164;224165;224166;224167;224168;224169 178595;178596;178597;178598;178599;178600;178601 178595 2 KLLETECPQYIR Unmodified 1548.797 0.79701344 797 P05109 S100A8 Protein S100-A8;Protein S100-A8, N-terminally processed yes yes 0 0 1 By MS/MS 10 0 1 1 52.879 52.229 3 8.0188E-06 59861 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 73.435 60.804 20773000 0 0 0 20773000 0 0 0 0 0 0 0 0 0 0 0 26624 797 24306 224170 178602 178602 1 KLLMENPYEGPDSQK Oxidation (M) 1763.84 0.84000047 4183 Q9BVC3 DSCC1 Sister chromatid cohesion protein DCC1 yes yes 0 1 1 By MS/MS 1 0 1 1 107.21 112.48 2 0.020978 93171 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 43.297 17.181 46564000 46564000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26625 4183 24307 224171 178603 178603 5669 0 KLNELESDLTFK Unmodified 1435.7559 0.75586013 2940 Q6P996 PDXDC1 Pyridoxal-dependent decarboxylase domain-containing protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 73.728 70.776 3 0.01814 86564 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 34.179 20.499 3367800 0 0 3367800 0 0 0 0 0 0 0 0 0 0 0 0 26626 2940 24308 224172 178604 178604 1 KLNVTEQEK Unmodified 1087.5873 0.58733824 827 P06733 ENO1 Alpha-enolase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8 3.46 3 9 1 1 1 1 1 1 1 1 1 1 1 1 12.517 11.846 2 3.037E-138 9656 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 249.13 153.22 829780000 179100000 207560000 154190000 25149000 0 0 5213300 4825800 0 5027800 27294000 87664000 4949400 30656000 98158000 26627 827 24309 224173;224174;224175;224176;224177;224178;224179;224180;224181;224182;224183;224184 178605;178606;178607;178608;178609;178610 178608 4 KLPATTATPDSSK Unmodified 1315.6983 0.69834526 3754 Q96B97 SH3KBP1 SH3 domain-containing kinase-binding protein 1 yes yes 0 0 1 By MS/MS By matching 2 0 2 1 1 23.977 19.476 2 0.017527 27256 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.666 27.665 28134000 19623000 8511200 0 0 0 0 0 0 0 0 0 0 0 0 0 26628 3754 24310 224185;224186 178611 178611 1 KLPEEEAECYFHSRPK Unmodified 2018.952 0.95201053 4681 Q9NVS9 PNPO Pyridoxine-5'-phosphate oxidase yes yes 0 0 2 By MS/MS 2 0 1 1 62.853 54.585 4 0.011148 73705 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 37.583 26.304 10316000 10316000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26629 4681 24311 224187 178612 178612 1 KLPEELGRDQNTVETLQR Unmodified 2125.1127 0.11274493 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 2 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 53.939 54.281 3 0.011853 60772 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.422 35.441 54038000 0 0 0 0 0 9061100 0 0 0 5467700 5702000 10377000 3768100 5548500 14114000 26630 2047 24312 224188;224189;224190;224191;224192;224193;224194 178613 178613 0 KLPEGESAPLELPAPPALPPK Unmodified 2150.1987 0.19870639 3768 Q96C00 ZBTB9 Zinc finger and BTB domain-containing protein 9 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 2 1 1 1 1 81.979 82.073 3 0.00014736 94925 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 50.425 41.171 32907000 0 0 0 0 2406700 2382700 1783100 3088600 2576400 3501100 4237700 4632500 1967900 6329900 0 26631 3768 24313 224195;224196;224197;224198;224199;224200;224201;224202;224203;224204;224205 178614;178615;178616;178617;178618;178619;178620;178621 178614 8 KLPEMDID Unmodified 959.46338 0.46338328 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 3 1 63.031 57.3 1;2 0.00144 73750 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.69 95.435 2072700000 130970000 1929000000 12785000 0 0 0 0 0 0 0 0 0 0 0 0 26632 1337 24314 224206;224207;224208;224209;224210 178622;178623;178624 178623 0 KLPEMDID Oxidation (M) 975.4583 0.45829791 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 1 1 By MS/MS 3 0 1 1 36.037 31.466 2 0.026901 39030 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 82.716 74.376 111120000 0 111120000 0 0 0 0 0 0 0 0 0 0 0 0 0 26633 1337 24314 224211 178625 178625 0 KLPEYNPR Unmodified 1015.5451 0.5450795 4806 Q9P258 RCC2 Protein RCC2 yes yes 0 0 1 By MS/MS 2 0 1 1 34.56 28.328 2 0.010059 39762 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 119.89 71.384 167020000 167020000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26634 4806 24315 224212 178626;178627 178627 2 KLPGYTDAALQEAQEIFGVDFDYDEFEK Unmodified 3237.503 0.50300608 3038 Q7KZ85 SUPT6H Transcription elongation factor SPT6 yes yes 0 0 1 By MS/MS 2 0 1 1 100.04 91.905 3 1.9275E-07 118452 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.884 50.104 8863900 8863900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26635 3038 24316 224213 178628 178628 1 KLPHPDLPAEEK Unmodified 1372.7351 0.73506511 2702 Q53GS9 USP39 U4/U6.U5 tri-snRNP-associated protein 2 yes yes 0 0 1 By MS/MS By MS/MS 1.75 0.433 1 3 3 1 64.105 60.507 2;3 7.0866E-10 59096 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 126.19 93.874 371220000 342710000 0 28506000 0 0 0 0 0 0 0 0 0 0 0 0 26636 2702 24317 224214;224215;224216;224217 178629;178630;178631;178632 178630 3 KLPIQEFHLSR Unmodified 1366.7721 0.77211932 1405 P39748 FEN1 Flap endonuclease 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 65.239 65.473 3 0.0011305 73564 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.727 57.579 148560000 0 0 0 0 0 25150000 0 6624500 7936500 4094300 6183000 14851000 10031000 8063600 65631000 26637 1405 24318 224218;224219;224220;224221;224222;224223;224224;224225;224226 178633;178634;178635;178636;178637;178638;178639 178635 6 KLPPGGLPGIDLSDPK Unmodified 1602.8981 0.8981077 281 O15391 YY2 Transcription factor YY2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.52 3.05 3 1 17 1 2 1 1 2 1 2 2 2 2 1 1 1 1 1 77.094 76.074 3 0.00037036 88039 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 39.685 0 179170000 49363000 19523000 9209000 3274000 9589400 13478000 5019100 7403100 11717000 13361000 10551000 12144000 5003600 9530100 0 26638 281 24319 224227;224228;224229;224230;224231;224232;224233;224234;224235;224236;224237;224238;224239;224240;224241;224242;224243;224244;224245;224246;224247 178640;178641;178642;178643;178644;178645;178646;178647;178648;178649;178650;178651;178652;178653;178654;178655;178656;178657;178658 178643 19 KLPPPPGSPLGHSPTASPPPTAR Unmodified 2258.2172 0.21715042 690 O95785 WIZ Protein Wiz yes yes 0 0 1 By MS/MS By matching By MS/MS By matching 10 0 4 1 1 1 1 53.717 53.604 4 0.0085764 60483 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 11.592 2.9916 43531000 0 0 0 6215800 13165000 0 15214000 0 0 0 0 8936200 0 0 0 26639 690 24320 224248;224249;224250;224251 178659 178659 1 KLPSDSGDLEALEGK Unmodified 1557.7886 0.78861683 410 O60524 NEMF Nuclear export mediator factor NEMF yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 59.589 58.827 3 0.0094555 76236 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 26.89 0 103120000 0 59825000 0 3726400 2790900 3387100 2750100 2829200 2638800 4343600 5797500 7652500 3787300 3593300 0 26640 410 24321 224252;224253;224254;224255;224256;224257;224258;224259;224260;224261;224262;224263;224264 178660;178661;178662;178663;178664;178665 178662 5 KLPSQPTTDTSTDK Unmodified 1517.7573 0.7573167 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.67 1.49 1 20 1 2 1 1 2 2 1 1 2 2 2 2 2 20.401 20.442 2;3 6.762E-15 20724 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 89.26 84.995 578380000 0 7127800 0 37279000 42302000 40682000 43848000 32254000 30973000 42843000 60130000 68924000 66619000 50567000 54826000 26641 3443 24322 224265;224266;224267;224268;224269;224270;224271;224272;224273;224274;224275;224276;224277;224278;224279;224280;224281;224282;224283;224284;224285 178666;178667;178668;178669;178670;178671;178672;178673;178674;178675;178676;178677;178678;178679;178680 178677 14 KLPTSASVGCDIQNSVGSNIK Unmodified 2174.1001 0.10013134 4407 Q9H582 ZNF644 Zinc finger protein 644 yes yes 0 0 1 By MS/MS 2 0 1 1 73.752 65.556 3 0.0016751 86853 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 26.151 16.229 12080000 12080000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26642 4407 24323 224286 178681 178681 1 KLPVDSVFNK Unmodified 1145.6445 0.64445919 1596 P49756 RBM25 RNA-binding protein 25 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.33 2.21 2 22 1 1 2 2 2 2 2 2 2 2 1 2 2 1 57.264 56.746 2;3 0.00054888 63042 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.804 81.426 460320000 11781000 32059000 0 25012000 20966000 49581000 38018000 29731000 69773000 38607000 39054000 9838900 30357000 47820000 17717000 26643 1596 24324 224287;224288;224289;224290;224291;224292;224293;224294;224295;224296;224297;224298;224299;224300;224301;224302;224303;224304;224305;224306;224307;224308;224309;224310 178682;178683;178684;178685;178686;178687;178688 178683 4 KLPVTFEDK Unmodified 1075.5914 0.59136099 2581;4774 Q15811;CON__ENSEMBL:ENSBTAP00000001528;Q9NZM3 ITSN1;ITSN2 Intersectin-1;Intersectin-2 no no 0 0 1 By MS/MS 2 0 1 1 57.463 49.282 2 0.020352 67107 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.57 44.009 + 105540000 105540000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26644 2581;4774 24325 224311 178689 178689 1 KLQEESDLELAK Unmodified 1401.7351 0.73512469 547 O75822 EIF3J Eukaryotic translation initiation factor 3 subunit J yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.93 3.43 6 2 22 2 4 2 2 2 1 2 2 2 2 2 1 2 2 2 43.848 42.478 2;3 5.6536E-14 53221 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 143.97 107.55 631590000 58982000 279710000 12540000 10000000 12710000 2871300 16672000 10587000 8964900 37909000 40776000 11790000 21412000 28655000 78014000 26645 547 24326 224312;224313;224314;224315;224316;224317;224318;224319;224320;224321;224322;224323;224324;224325;224326;224327;224328;224329;224330;224331;224332;224333;224334;224335;224336;224337;224338;224339;224340;224341 178690;178691;178692;178693;178694;178695;178696;178697;178698;178699;178700;178701;178702;178703;178704;178705;178706;178707 178698 15 KLQEYNVGGK Unmodified 1134.6033 0.60332266 1502 P46379 BAG6 Large proline-rich protein BAG6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 20.822 20.186 2 3.7037E-05 27929 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 132.01 70.011 60133000 33654000 0 0 0 0 1546500 3297200 3973800 0 0 6782100 10879000 0 0 0 26646 1502 24327 224342;224343;224344;224345;224346;224347 178708;178709;178710 178708 2 KLQGEVEK Unmodified 929.5182 0.51819605 264 O15212 PFDN6 Prefoldin subunit 6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 9.3336 6.1789 2 0.011477 8045 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 133.58 52.201 136580000 18827000 96798000 20951000 0 0 0 0 0 0 0 0 0 0 0 0 26647 264 24328 224348;224349;224350;224351 178711;178712;178713 178713 1 KLQNLEGK Unmodified 928.53418 0.53418046 3358 Q8N6H7 ARFGAP2 ADP-ribosylation factor GTPase-activating protein 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 15.126 11.868 2 0.020566 17955 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 141.23 99.928 33822000 26345000 0 7476400 0 0 0 0 0 0 0 0 0 0 0 0 26648 3358 24329 224352;224353 178714 178714 1 KLSEEEILENPDLFLTSEATDYGRQLHDDYFYHDEL Unmodified 4344.0023 0.0022575942 2400 Q14257 RCN2 Reticulocalbin-2 yes yes 0 0 2 By MS/MS 2 0 2 2 98.013 89.882 4;5 1.2504E-17 116060 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.434 54.36 99224000 99224000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26649 2400 24330 224354;224355 178715;178716 178716 2 KLTEDDLILLEK Unmodified 1428.8076 0.80756135 5085 Q9Y263 PLAA Phospholipase A-2-activating protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.43 3.54 4 1 2 1 2 2 1 1 79.109 76.108 2;3 0.0013421 95750 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.894 54.668 140740000 42560000 58330000 26714000 0 0 5038000 0 0 0 0 0 0 0 0 8102900 26650 5085 24331 224356;224357;224358;224359;224360;224361;224362 178717;178718;178719;178720;178721;178722 178717 6 KLTEESLTSDAANDNHIVAEGVSEESLNRLK Unmodified 3368.6696 0.66957091 3341 Q8N584 TTC39C Tetratricopeptide repeat protein 39C yes yes 0 0 2 By MS/MS 2 0 1 1 79.989 71.859 4 3.0814E-20 94390 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.174 69.743 13799000 13799000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26651 3341 24332 224363 178723 178723 1 KLTEIINTQHENVK Unmodified 1665.905 0.90498399 1128 P21695 GPD1 Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic yes yes 0 0 1 By MS/MS 2 0 1 1 50.447 42.547 3 0.040978 58928 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 29.217 20.453 8888700 8888700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26652 1128 24333 224364 178724 178724 1 KLTELGTVDPK Unmodified 1199.6762 0.67615325 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 6 2 22 2 4 2 2 1 2 2 2 2 2 2 2 2 2 1 41.211 39.879 2;3 8.3709E-16 50667 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 163.9 130.9 2498600000 149170000 552130000 255470000 146870000 89721000 111770000 127060000 102500000 83120000 162930000 201060000 175580000 125550000 99084000 116620000 26653 1518 24334 224365;224366;224367;224368;224369;224370;224371;224372;224373;224374;224375;224376;224377;224378;224379;224380;224381;224382;224383;224384;224385;224386;224387;224388;224389;224390;224391;224392;224393;224394 178725;178726;178727;178728;178729;178730;178731;178732;178733;178734;178735;178736;178737;178738;178739;178740;178741;178742;178743;178744;178745;178746;178747;178748;178749;178750;178751;178752 178735 13 KLTGGSNWQPK Unmodified 1214.6408 0.6407708 2300 Q13492 PICALM Phosphatidylinositol-binding clathrin assembly protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 25.917 26.121 3 0.012256 27711 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 37.144 27.489 131260000 0 0 0 10914000 10083000 2884200 13338000 12571000 5071400 0 12918000 20067000 12706000 13966000 16745000 26654 2300 24335 224395;224396;224397;224398;224399;224400;224401;224402;224403;224404;224405 178753;178754 178753 1 KLTPITYPQGLAMAK Unmodified 1630.9116 0.91164927 1936 P63000 RAC1 Ras-related C3 botulinum toxin substrate 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 74.329 73.259 3 1.7734E-05 83832 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.079 54.288 88211000 18901000 0 0 0 2656000 0 0 8263100 0 0 7336100 0 4912500 9401900 36741000 26655 1936 24336 224406;224407;224408;224409;224410;224411;224412;224413 178755;178756;178757;178758;178759;178760 178756 6 KLTPITYPQGLAMAK Oxidation (M) 1646.9066 0.90656389 1936 P63000 RAC1 Ras-related C3 botulinum toxin substrate 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 65.304 65.459 3 9.0769E-05 74743 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 65.219 61.611 67420000 0 0 0 0 8767700 10265000 0 0 0 0 11859000 20565000 0 0 15963000 26656 1936 24336 224414;224415;224416;224417;224418 178761;178762;178763;178764 178763 3113 4 KLTQIQESQVTSHNK Unmodified 1739.9166 0.91661131 3618 Q92541 RTF1 RNA polymerase-associated protein RTF1 homolog yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25.158 24.603 3 1.1333E-97 25138 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 173.71 158.75 338100000 110470000 0 7355500 16848000 15321000 12175000 28461000 23236000 16026000 16658000 21963000 0 20971000 15199000 33418000 26657 3618 24337 224419;224420;224421;224422;224423;224424;224425;224426;224427;224428;224429;224430;224431;224432 178765;178766;178767;178768;178769;178770;178771;178772;178773;178774;178775;178776;178777;178778;178779;178780;178781 178775 17 KLTQTSGETTHTDK Unmodified 1545.7635 0.76346471 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.12 3.39 4 13 1 1 2 1 1 1 1 1 1 1 2 1 1 2 6.2615 5.7101 3 0.00013484 4206 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 71.031 61.461 153340000 58209000 3523800 22986000 4007300 5934100 2539400 7779200 4166300 3448600 5056700 7957700 7985600 0 7191800 12558000 26658 1492 24338 224433;224434;224435;224436;224437;224438;224439;224440;224441;224442;224443;224444;224445;224446;224447;224448;224449 178782;178783;178784;178785;178786;178787 178787 5 KLTSDEEGEPSGK Unmodified 1375.6467 0.64670362 3560 Q8WVC0 LEO1 RNA polymerase-associated protein LEO1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.08 1 1 22 2 2 2 1 2 2 2 2 1 2 2 2 2 9.8145 9.6544 2;3 0.00054124 7980 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 62.162 50.843 220940000 0 27057000 0 10041000 11133000 1450200 12941000 9774600 6206600 10176000 29578000 32442000 22112000 19452000 28575000 26659 3560 24339 224450;224451;224452;224453;224454;224455;224456;224457;224458;224459;224460;224461;224462;224463;224464;224465;224466;224467;224468;224469;224470;224471;224472;224473 178788;178789;178790;178791;178792;178793;178794;178795;178796;178797;178798;178799;178800 178799 11 KLTSEEIEAK Unmodified 1146.6132 0.61321864 3704 Q93034 CUL5 Cullin-5 yes yes 0 0 1 By MS/MS 2 0 1 1 24.987 22.026 3 0.032812 28070 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 44.024 28.873 9614600 0 0 9614600 0 0 0 0 0 0 0 0 0 0 0 0 26660 3704 24340 224474 178801 178801 0 KLTVKPIETK Unmodified 1155.7227 0.72270951 4308 Q9GZU8 FAM192A Protein FAM192A yes yes 0 0 2 By MS/MS 2 0 1 1 35.424 29.076 3 0.02949 40806 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.062 51.626 41647000 41647000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26661 4308 24341 224475 178802 178802 0 KLTVNPGTK Unmodified 956.56548 0.56548059 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 15.59 14.806 2 0.0029786 19711 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 136.99 85.202 693350000 258670000 19544000 18890000 24957000 18920000 18894000 28968000 34514000 11387000 39325000 52320000 38019000 40523000 34326000 54094000 26662 894 24342 224476;224477;224478;224479;224480;224481;224482;224483;224484;224485;224486;224487;224488;224489;224490;224491 178803;178804;178805;178806;178807;178808;178809;178810;178811;178812 178809 2 KLTYDEEYNFENEGEDEAMFVEYRK Oxidation (M) 3163.3604 0.36044094 344 O43592 XPOT Exportin-T yes yes 0 1 2 By MS/MS 2 0 2 2 80.681 72.55 3;4 0.00021613 95040 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.468 41.798 45186000 45186000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26663 344 24343 224492;224493 178813;178814 178813 427 2 KLTYDEEYNFENEGEDEAMFVEYRK Unmodified 3147.3655 0.36552632 344 O43592 XPOT Exportin-T yes yes 0 0 2 By MS/MS 2 0 1 1 84.348 76.218 3 9.5979E-91 99567 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 140.41 138.13 18112000 18112000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26664 344 24343 224494 178815 178815 1 KLVIVGDGACGK Unmodified 1215.6645 0.66454271 1851;858 P08134;P61586 RHOC;RHOA Rho-related GTP-binding protein RhoC;Transforming protein RhoA no no 0 0 1 By MS/MS 2 0 1 1 45.105 38.24 2 0.00094137 52459 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.483 53.196 21454000 21454000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26665 858;1851 24344 224495 178816 178816 1 KLVPLDYGEDDK Unmodified 1390.698 0.6980109 1596 P49756 RBM25 RNA-binding protein 25 yes yes 0 0 1 By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 52.481 52.633 3 0.039474 58638 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 25.731 19.187 38154000 0 0 0 2288700 2013900 0 2705300 1772400 2095500 3721700 4492000 6992000 3945400 2574500 5552400 26666 1596 24345 224496;224497;224498;224499;224500;224501;224502;224503;224504;224505;224506 178817;178818 178818 2 KMDEYVASLHLPSFDAHLTELTDDQAK Unmodified 3073.4703 0.47026616 377 O43865 AHCYL1 Putative adenosylhomocysteinase 2 yes yes 0 0 1 By MS/MS 2 0 1 1 93.621 85.49 4 0.0008882 110665 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 34.272 28.552 10891000 10891000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26667 377 24346 224507 178819 178819 1 KMDQPPQAK Unmodified 1041.5277 0.52771487 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 10.479 7.2905 2 0.00025603 10579 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 152.86 124.68 125610000 23362000 99988000 2263500 0 0 0 0 0 0 0 0 0 0 0 0 26668 1337 24347 224508;224509;224510;224511 178820;178821;178822 178820 1 KMDQPPQAK Oxidation (M) 1057.5226 0.5226295 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 6.2942 2.958 2 0.0081523 5129 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.136 81.1 170410000 23235000 147180000 0 0 0 0 0 0 0 0 0 0 0 0 0 26669 1337 24347 224512;224513 178823 178823 2016 0 KMEADGVEVK Oxidation (M) 1120.5434 0.54342452 2236 Q13123 IK Protein Red yes yes 0 1 1 By MS/MS 2.5 0.5 1 1 2 14.277 10.886 2 0.016422 13570 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 91.867 39.151 20425000 0 20425000 0 0 0 0 0 0 0 0 0 0 0 0 0 26670 2236 24348 224514;224515 178824;178825 178825 3633 2 KMEADGVEVK Unmodified 1104.5485 0.5485099 2236 Q13123 IK Protein Red yes yes 0 0 1 By MS/MS 10 0 1 1 21.211 21.85 2 0.034927 21770 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 103.26 44.01 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26671 2236 24348 224516 178826 178826 1 KMEDSVGCLETAEEVK Oxidation (M) 1839.823 0.82302978 1356 P35579 MYH9 Myosin-9 yes yes 0 1 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.69 2.88 3 2 24 1 4 2 2 2 2 2 2 2 2 2 2 2 2 46.734 46.137 2;3 1.0633E-41 59851 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 152.07 118.18 1617200000 350230 190210000 0 109450000 142690000 90839000 148260000 124690000 15995000 131420000 144940000 178370000 157330000 100850000 81805000 26672 1356 24349 224517;224518;224519;224520;224521;224522;224523;224524;224525;224526;224527;224528;224529;224530;224531;224532;224533;224534;224535;224536;224537;224538;224539;224540;224541;224542;224543;224544;224545 178827;178828;178829;178830;178831;178832;178833;178834;178835;178836;178837;178838;178839;178840;178841;178842;178843;178844;178845;178846;178847;178848;178849;178850 178832 2080 23 KMEDSVGCLETAEEVK Unmodified 1823.8281 0.82811515 1356 P35579 MYH9 Myosin-9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.08 2.5 2 1 22 1 2 1 1 2 2 2 2 2 2 2 2 2 2 54.24 53.981 2;3 2.0154E-22 61209 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 142.85 134.34 1169400000 0 68162000 0 54571000 67193000 54280000 114980000 96123000 46926000 96170000 109020000 114210000 90360000 98386000 158990000 26673 1356 24349 224546;224547;224548;224549;224550;224551;224552;224553;224554;224555;224556;224557;224558;224559;224560;224561;224562;224563;224564;224565;224566;224567;224568;224569;224570 178851;178852;178853;178854;178855;178856;178857;178858;178859;178860;178861;178862;178863;178864;178865;178866;178867 178852 15 KMEGVTNAVLHEVK Oxidation (M) 1569.8185 0.81847717 4282 Q9C0B1 FTO Alpha-ketoglutarate-dependent dioxygenase FTO yes yes 0 1 1 By MS/MS 2 0 2 2 53.702 45.639 3;4 0.0033771 62846 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.323 33.291 92178000 92178000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26674 4282 24350 224571;224572 178868;178869 178868 5740 1 KMESDFEQK Unmodified 1140.5121 0.51212439 417 O60610 DIAPH1 Protein diaphanous homolog 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 8.12 3.26 1 1 6 2 1 1 1 1 1 1 16.043 15.377 2 0.00015952 14402 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 170.5 81.359 107250000 0 43860000 0 0 0 0 0 5810100 1493400 0 16789000 13905000 8065400 0 17328000 26675 417 24351 224573;224574;224575;224576;224577;224578;224579;224580 178870;178871;178872;178873 178872 4 KMESDFEQK Oxidation (M) 1156.507 0.50703901 417 O60610 DIAPH1 Protein diaphanous homolog 1 yes yes 0 1 1 By MS/MS By MS/MS 3 0 2 1 1 9.9442 6.3392 3 0.0062271 8305 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 72.607 60.56 19332000 135000 19197000 0 0 0 0 0 0 0 0 0 0 0 0 0 26676 417 24351 224581;224582 178874 178874 521 0 KMETSHNQCQELK Unmodified 1631.7396 0.73957492 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 0 1 By MS/MS By matching 2 0 2 1 1 12.744 9.6143 3 0.021003 14746 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 37.525 28.075 20185000 17870000 0 2315000 0 0 0 0 0 0 0 0 0 0 0 0 26677 1286 24352 224583;224584 178875 178875 1 KMSSSGGK Oxidation (M) 796.3749 0.37490263 3965 Q96RA2 OR7D2 Olfactory receptor 7D2 yes yes 0 1 1 By MS/MS By MS/MS 10 0 2 1 1 63.943 63.67 1 0.011187 73024 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 46.021 46.021 66383000 0 0 0 0 24536000 41847000 0 0 0 0 0 0 0 0 0 26678 3965 24353 224585;224586 178876;178877 178876 5450 0 KNDIYGED Unmodified 952.41379 0.41379055 1620 P50395 GDI2 Rab GDP dissociation inhibitor beta yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 19.693 15.59 2 0.020954 20313 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.55 109.07 119690000 10489000 109200000 0 0 0 0 0 0 0 0 0 0 0 0 0 26679 1620 24354 224587;224588 178878 178878 1 KNDLVDADNK Unmodified 1130.5568 0.5567664 1433 P41214 EIF2D Eukaryotic translation initiation factor 2D yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 15.2 11.767 2 2.4776E-10 15876 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 164.31 110.55 34191000 0 34191000 0 0 0 0 0 0 0 0 0 0 0 0 0 26680 1433 24355 224589;224590 178879;178880 178879 2 KNDMDEPPSGDFGGDEEK Unmodified 1965.7898 0.78981539 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 38.728 38.794 3 0.012546 42836 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 25.917 25.917 20790000 0 0 0 0 2845300 2784200 0 3480700 0 5186500 6493700 0 0 0 0 26681 2451 24356 224591;224592;224593;224594;224595 178881;178882;178883 178883 3 KNEEAADEVFK Unmodified 1278.6092 0.6091959 731 P00519 ABL1 Tyrosine-protein kinase ABL1 yes yes 0 0 1 By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 7 1 2 1 1 1 1 29.409 29.386 2;3 0.008453 31239 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 29.264 12.632 26448000 0 0 0 2006200 7102400 0 2744200 0 4451300 0 4918500 0 0 5225500 0 26682 731 24357 224596;224597;224598;224599;224600;224601;224602 178884;178885;178886 178885 3 KNEELEQLYQDQEVPK Unmodified 1988.9691 0.96910039 4681 Q9NVS9 PNPO Pyridoxine-5'-phosphate oxidase yes yes 0 0 1 By MS/MS 3 0 1 1 67.27 62.585 3 0.00018272 76611 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 59.513 56.915 5676200 0 5676200 0 0 0 0 0 0 0 0 0 0 0 0 0 26683 4681 24358 224603 178887 178887 1 KNEELEQLYQDQEVPKPK Unmodified 2214.1168 0.11682726 4681 Q9NVS9 PNPO Pyridoxine-5'-phosphate oxidase yes yes 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 66.246 61.418 4 0.00082391 79275 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 54.355 45.423 49696000 0 30041000 19655000 0 0 0 0 0 0 0 0 0 0 0 0 26684 4681 24359 224604;224605 178888;178889;178890;178891 178888 4 KNEGLTWPELVIGDK Unmodified 1697.8988 0.89883598 3975 Q96RS6 NUDCD1 NudC domain-containing protein 1 yes yes 0 0 1 By MS/MS 10 0 1 1 83.716 83.906 3 0.033124 96949 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 23.635 17.975 9185200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9185200 26685 3975 24360 224606 178892 178892 1 KNEIMVAPDK Unmodified 1143.5958 0.59579444 4542 Q9NP97 DYNLRB1 Dynein light chain roadblock-type 1 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching 6.93 3.77 4 2 9 1 4 1 1 1 1 1 1 1 1 1 1 30.248 28.542 2;3 1.3976E-10 36106 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 177.57 142.28 366240000 19119000 258590000 4562300 0 3420500 4090900 4737400 0 0 5783400 15814000 9542300 4925500 9925500 25733000 26686 4542 24361 224607;224608;224609;224610;224611;224612;224613;224614;224615;224616;224617;224618;224619;224620;224621 178893;178894;178895;178896;178897;178898;178899;178900;178901;178902;178903 178898 9 KNEIMVAPDK Oxidation (M) 1159.5907 0.59070906 4542 Q9NP97 DYNLRB1 Dynein light chain roadblock-type 1 yes yes 0 1 1 By MS/MS By MS/MS 2.67 0.471 2 4 2 4 24.36 20.115 2;3 5.2201E-08 24811 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 157.38 103.22 179890000 415560 179470000 0 0 0 0 0 0 0 0 0 0 0 0 0 26687 4542 24361 224622;224623;224624;224625;224626;224627 178904;178905;178906 178905 5958 1 KNELFSNL Unmodified 963.50255 0.50254598 209 O14745 SLC9A3R1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching 7.69 3.47 2 2 9 1 3 1 1 1 1 1 1 1 1 1 70.004 68.741 1;2 0.010345 84851 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 187.63 129.47 396880000 320660 305630000 0 3812900 0 4588300 0 5185500 3678900 0 13300000 17155000 7101400 12683000 23419000 26688 209 24362 224628;224629;224630;224631;224632;224633;224634;224635;224636;224637;224638;224639;224640 178907;178908;178909;178910 178909 2 KNEPEDEEEEEEEEDEDEEEEDEDEE Unmodified 3255.1026 0.10260989 1207 P26583 HMGB2 High mobility group protein B2 yes yes 0 0 1 By MS/MS 1 0 1 1 105.77 111.03 3 0.00013913 91601 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 40.104 40.104 13269000 13269000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26689 1207 24363 224641 178911 178911 1 KNEPIFK Unmodified 874.49125 0.49125301 244 O15042 U2SURP U2 snRNP-associated SURP motif-containing protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 24.279 20.255 2 0.020015 25461 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 149.4 41.807 116410000 79816000 11521000 25072000 0 0 0 0 0 0 0 0 0 0 0 0 26690 244 24364 224642;224643;224644 178912 178912 0 KNESSDEISDAEQMPQHTLK Unmodified 2286.0434 0.043404317 2670 Q3L8U1 CHD9 Chromodomain-helicase-DNA-binding protein 9 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 37.833 38.132 4 0.020845 41721 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 18.058 5.7547 51092000 0 0 0 0 0 3678500 0 0 5375300 0 0 34689000 0 7349200 0 26691 2670 24365 224645;224646;224647;224648 178913 178913 1 KNHEEEMLALR Unmodified 1368.682 0.68198369 70 CON__P08779;P08779;CON__Q9Z2K1;CON__Q3ZAW8 KRT16 Keratin, type I cytoskeletal 16 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 17.429 17.63 3 0.0031956 16698 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 39.917 32.552 + 53344000 0 0 0 0 0 12993000 0 0 12618000 11504000 16229000 0 0 0 0 26692 70 24366 224649;224650;224651;224652 178914;178915;178916;178917 178917 3 KNHEEEMNALR Unmodified 1369.6408 0.64084715 56;84 CON__P02533;P02533;CON__Q04695;Q04695 KRT14;KRT17 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 17 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 17.597 17.778 3 2.4089E-16 17331 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 132.32 104.89 + 614700000 0 0 0 57635000 11157000 25107000 12063000 114160000 17594000 50026000 42543000 72480000 157970000 25095000 28869000 26693 56;84 24367 224653;224654;224655;224656;224657;224658;224659;224660;224661;224662;224663;224664 178918;178919;178920;178921;178922;178923;178924;178925;178926;178927;178928;178929 178926 6 KNHEEEMNALR Oxidation (M) 1385.6358 0.63576177 56;84 CON__P02533;P02533;CON__Q04695;Q04695 KRT14;KRT17 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 17 no no 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 18 2 2 2 1 1 1 2 1 1 1 2 2 6.9845 7.0935 2;3 0.0057115 5183 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 66.663 52.102 + 482570000 0 0 0 141370000 37373000 30570000 2232600 5691000 37584000 72962000 72462000 2262300 13538000 44361000 22160000 26694 56;84 24367 224665;224666;224667;224668;224669;224670;224671;224672;224673;224674;224675;224676;224677;224678;224679;224680;224681;224682 178930;178931;178932 178932 58 2 KNPASLPLTQAALK Unmodified 1450.8508 0.85076357 2289 Q13428 TCOF1 Treacle protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 61.353 60.816 3 5.5872E-05 68243 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 60.345 56.554 225620000 15973000 0 0 10892000 14177000 8312300 17646000 18429000 7969000 18168000 23394000 26927000 17560000 16796000 29371000 26695 2289 24368 224683;224684;224685;224686;224687;224688;224689;224690;224691;224692;224693;224694;224695 178933;178934;178935;178936;178937;178938;178939;178940;178941;178942;178943;178944;178945 178941 13 KNPDDYTPVNIDGAHAQR Unmodified 2009.9555 0.95551601 3893 Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 yes yes 0 0 1 By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 2 1 1 1 2 2 1 42.725 42.869 3;4 3.2507E-05 47898 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 63.145 52.329 125910000 0 0 0 6467900 5174300 14304000 5096900 16923000 6469000 5805100 11968000 0 26285000 7365700 20050000 26696 3893 24369 224696;224697;224698;224699;224700;224701;224702;224703;224704;224705;224706;224707;224708;224709 178946;178947;178948;178949;178950;178951;178952 178948 7 KNPEVPVNFAEFSK Unmodified 1604.8199 0.81985738 274 O15347 HMGB3 High mobility group protein B3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 75.398 74.259 2;3 3.9685E-24 93821 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 133.15 103.4 569250000 81052000 132360000 162730000 10761000 9779800 13252000 9366900 13778000 11932000 12965000 19448000 22342000 9655800 16240000 43576000 26697 274 24370 224710;224711;224712;224713;224714;224715;224716;224717;224718;224719;224720;224721;224722;224723;224724;224725 178953;178954;178955;178956;178957;178958;178959;178960;178961;178962;178963;178964;178965;178966;178967 178955 14 KNPQAVLDVLK Unmodified 1223.7238 0.72377215 2248 Q13177;O75914 PAK2;PAK3 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34;Serine/threonine-protein kinase PAK 3 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.62 3.02 5 24 2 1 2 2 2 2 2 2 2 2 2 2 2 2 2 63.409 62.647 2;3 0.00014379 87106 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.596 79.489 411870000 191860000 0 16036000 7996000 6093200 17287000 13210000 11886000 9959200 21084000 21094000 25863000 17312000 18705000 33481000 26698 2248 24371 224726;224727;224728;224729;224730;224731;224732;224733;224734;224735;224736;224737;224738;224739;224740;224741;224742;224743;224744;224745;224746;224747;224748;224749;224750;224751;224752;224753;224754 178968;178969;178970;178971;178972;178973;178974;178975;178976;178977;178978;178979;178980;178981;178982;178983;178984;178985 178976 11 KPAAAAAPGTAEK Unmodified 1181.6404 0.64043645 1624 P50454 SERPINH1 Serpin H1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.29 6 1 24 2 3 2 2 2 2 2 2 2 2 2 2 2 2 2 8.555 7.9393 2;3 7.5246E-19 5673 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 176.32 132.88 1271800000 619130000 276760000 44756000 11756000 12275000 12939000 14169000 10719000 13057000 19056000 81967000 41793000 28173000 30234000 55030000 26699 1624 24372 224755;224756;224757;224758;224759;224760;224761;224762;224763;224764;224765;224766;224767;224768;224769;224770;224771;224772;224773;224774;224775;224776;224777;224778;224779;224780;224781;224782;224783;224784;224785 178986;178987;178988;178989;178990;178991;178992;178993;178994;178995;178996;178997;178998;178999;179000;179001;179002;179003;179004;179005;179006;179007;179008 178997 12 KPAAGLSAAPVPTAPAAGAPLMDFGNDFVPPAPR Oxidation (M) 3286.6809 0.68086806 4566 Q9NQC3 RTN4 Reticulon-4 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 87.94 88.09 3 1.9466E-20 102103 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.001 46.945 15814000 0 0 0 0 0 0 0 2776900 0 0 0 0 0 1064600 11972000 26700 4566 24373 224786;224787;224788 179009 179009 5974 1 KPADDQDPIDALSGDLDSCPSTTETSQNTAK Unmodified 3276.4576 0.4575888 1113 P20810 CAST Calpastatin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 77.102 75.895 3 1.4017E-151 93324 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 154.7 146.42 1065900000 101390000 605290000 0 14232000 17035000 18740000 17429000 15921000 16905000 17366000 41837000 70964000 17968000 36579000 74240000 26701 1113 24374 224789;224790;224791;224792;224793;224794;224795;224796;224797;224798;224799;224800;224801;224802;224803;224804 179010;179011;179012;179013;179014;179015;179016;179017;179018;179019;179020;179021;179022;179023;179024;179025;179026 179013 17 KPAEQAEETAPIEATATK Unmodified 1883.9476 0.94763666 3333 Q8N4Q1 CHCHD4 Mitochondrial intermembrane space import and assembly protein 40 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 39.61 34.771 3 0.0013826 45545 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 46.461 36.881 15582000 0 15582000 0 0 0 0 0 0 0 0 0 0 0 0 0 26702 3333 24375 224805;224806 179027;179028 179027 1 KPALQSSVVATSK Unmodified 1314.7507 0.75071518 4376 Q9H307 PNN Pinin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 2 2 2 2 2 1 2 2 2 2 27.407 27.657 2;3 6.9028E-06 28561 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 94.191 65.234 260570000 0 0 0 0 18551000 0 24790000 17735000 18397000 25745000 30391000 35523000 24291000 27715000 37432000 26703 4376 24376 224807;224808;224809;224810;224811;224812;224813;224814;224815;224816;224817;224818;224819;224820;224821;224822;224823;224824;224825 179029;179030;179031;179032;179033;179034;179035;179036;179037;179038;179039 179034 9 KPAPGPHSSPPEEK Unmodified 1456.731 0.73104237 473 O75182 SIN3B Paired amphipathic helix protein Sin3b yes yes 0 0 1 By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 7.8118 7.6017 3 0.012979 5024 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 30.567 22.157 41670000 16006000 0 0 0 647880 1171400 0 827140 1349000 1392100 12892000 1421500 1724700 1610100 2629100 26704 473 24377 224826;224827;224828;224829;224830;224831;224832;224833;224834;224835;224836 179040;179041;179042 179040 3 KPAPPPAPPQATK Unmodified 1298.7347 0.73467118 3167 Q86VM9 ZC3H18 Zinc finger CCCH domain-containing protein 18 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 22.29 21.538 3 0.0044826 30365 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.841 44.522 441640000 79298000 10862000 0 15145000 15501000 24786000 36479000 18478000 21720000 32328000 44005000 25523000 37531000 36506000 43484000 26705 3167 24378 224837;224838;224839;224840;224841;224842;224843;224844;224845;224846;224847;224848;224849;224850;224851 179043;179044;179045;179046;179047;179048;179049;179050;179051;179052;179053;179054;179055;179056;179057;179058;179059;179060 179050 17 KPASFMTSICDER Oxidation (M) 1556.6963 0.69631312 1714 P53396 ACLY ATP-citrate synthase yes yes 0 1 1 By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS 10 0 13 1 1 2 1 2 1 2 1 2 37.425 37.568 2;3 0.00069443 41668 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 56.648 44.087 499960000 0 0 0 3221500 6591600 41471000 27316000 200360000 16014000 53338000 13392000 138250000 0 0 0 26706 1714 24379 224852;224853;224854;224855;224856;224857;224858;224859;224860;224861;224862;224863;224864 179061;179062;179063;179064;179065 179061 2778 3 KPASFMTSICDER Unmodified 1540.7014 0.7013985 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 2 2 1 1 1 1 52.638 52.774 2;3 0.00023081 58235 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.879 62.441 759990000 0 0 0 27576000 40117000 28605000 150060000 186290000 104700000 46085000 66195000 89667000 0 4089300 16599000 26707 1714 24379 224865;224866;224867;224868;224869;224870;224871;224872;224873;224874;224875;224876;224877 179066;179067;179068;179069;179070;179071;179072;179073;179074;179075;179076;179077;179078 179070 13 KPASSSSAPQNIPK Unmodified 1410.7467 0.74669243 3835 Q96F86 EDC3 Enhancer of mRNA-decapping protein 3 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.08 4 1 21 2 1 2 2 2 2 2 1 2 2 2 1 2 2 1 18.706 18.089 2;3 5.2786E-23 25810 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 129.74 100.07 374810000 174410000 1541100 12880000 14861000 10323000 13914000 14355000 12625000 8251300 17436000 18407000 19127000 21674000 14073000 20935000 26708 3835 24380 224878;224879;224880;224881;224882;224883;224884;224885;224886;224887;224888;224889;224890;224891;224892;224893;224894;224895;224896;224897;224898;224899;224900;224901;224902;224903 179079;179080;179081;179082;179083;179084;179085;179086;179087;179088;179089;179090;179091;179092;179093 179085 12 KPATEVDPTHFEK Unmodified 1497.7464 0.74635808 1159 P23458 JAK1 Tyrosine-protein kinase JAK1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 35.743 34.917 3 0.015088 37386 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 31.043 18.682 102150000 5536500 0 14887000 6406100 4541000 0 6207400 4390900 13376000 7913300 11230000 19099000 0 8563300 0 26709 1159 24381 224904;224905;224906;224907;224908;224909;224910;224911;224912;224913;224914 179094;179095;179096;179097 179097 4 KPCSETSQIEDTPSSK Unmodified 1792.8149 0.81490793 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 20.257 20.524 3 0.0015424 21375 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 30.083 19.886 84248000 0 0 0 10798000 0 22219000 0 0 0 0 0 26169000 0 0 25062000 26710 1226 24382 224915;224916;224917;224918 179098;179099 179098 1 KPDAQSGPAGLVCGDQR Unmodified 1754.837 0.83698078 4683 Q9NVU0 POLR3E DNA-directed RNA polymerase III subunit RPC5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 37.83 38.028 3 0.0093103 41991 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 29.274 16.441 44828000 0 0 0 2611300 2370100 0 3475300 4363000 3140100 0 7779300 6150900 5216700 4785600 4935500 26711 4683 24383 224919;224920;224921;224922;224923;224924;224925;224926;224927;224928 179100;179101;179102;179103 179100 4 KPDCDDWESGLNAMECALHLEK Unmodified 2617.1247 0.12470788 766 P02794 FTH1 Ferritin heavy chain;Ferritin heavy chain, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 2 2 3 1 94.734 88.982 3;4 0.0030028 108237 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 31.775 30.36 105500000 98562000 6934900 0 0 0 0 0 0 0 0 0 0 0 0 0 26712 766 24384 224929;224930;224931;224932 179104;179105;179106;179107 179105 3 KPDIDITGPK Unmodified 1082.5972 0.59717465 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 38.15 37.392 2 0.03419 40819 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 84.817 55.668 269770000 0 60085000 10017000 12346000 10511000 11637000 12720000 16264000 12468000 13831000 16006000 23859000 27846000 17411000 24774000 26713 2172 24385 224933;224934;224935;224936;224937;224938;224939;224940;224941;224942;224943;224944;224945;224946;224947 179108;179109;179110 179110 0 KPDPASLRAASCGEGK Unmodified 1642.8097 0.80970339 2875 Q6FI81 CIAPIN1 Anamorsin yes yes 0 0 2 By MS/MS 2 0 1 1 30.113 24.493 3 0.00093433 34293 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.208 58.417 27321000 27321000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26714 2875 24386 224948 179111 179111 1 KPDPNIK Unmodified 810.45995 0.45995289 306 O43237 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 yes yes 0 0 1 By MS/MS 3 0 1 1 8.479 5.1206 2 0.036785 6966 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 170.73 31.877 50090000 0 50090000 0 0 0 0 0 0 0 0 0 0 0 0 0 26715 306 24387 224949 179112 179112 0 KPDQAIK Unmodified 798.45995 0.45995289 987 P13798 APEH Acylamino-acid-releasing enzyme yes yes 0 0 1 By MS/MS 2 0 1 1 5.7375 2.3601 2 0.042909 5225 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 125.01 40.763 143410000 143410000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26716 987 24388 224950 179113 179113 1 KPDREEIQMSNMGSNTK Oxidation (M) 1979.9041 0.90407406 426 O60716 CTNND1 Catenin delta-1 yes yes 0 1 2 By MS/MS 2 0 2 2 23.224 18.288 3 7.624E-06 26959 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.208 78.052 17944000 17944000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26717 426 24389 224951;224952 179114;179115 179115 538;539 2 KPDSEASALK Unmodified 1044.5451 0.54513908 4814 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 0 0 1 By MS/MS 3 0 1 1 12.753 9.3308 2 0.038188 11884 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 73.985 18.309 4984500 0 4984500 0 0 0 0 0 0 0 0 0 0 0 0 0 26718 4814 24390 224953 179116 179116 1 KPDSMVTNSSTENEA Unmodified 1608.6937 0.69373016 306 O43237 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 23.01 23.25 2 0.00012701 23434 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.959 86.094 76439000 0 0 0 0 4710600 6702500 3891900 5678300 3070200 5028400 8613000 10498000 7076600 7908500 13260000 26719 306 24391 224954;224955;224956;224957;224958;224959;224960;224961;224962;224963;224964 179117;179118;179119;179120 179117 4 KPDYDPEK Unmodified 990.46583 0.46582612 5047 Q9UP83 COG5 Conserved oligomeric Golgi complex subunit 5 yes yes 0 0 1 By MS/MS 3 0 1 1 13.047 9.6251 2 0.043252 12066 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 103.56 76.038 6488800 0 6488800 0 0 0 0 0 0 0 0 0 0 0 0 0 26720 5047 24392 224965 179121 179121 1 KPEAVRWEK Unmodified 1141.6244 0.62439245 5131 Q9Y2Z0 SUGT1 Suppressor of G2 allele of SKP1 homolog yes yes 0 0 2 By MS/MS By matching By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 17.129 17.56 3 0.048765 17214 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 74.173 54.339 120560000 0 0 0 0 0 0 0 0 0 0 17626000 31136000 23448000 13693000 34654000 26721 5131 24393 224966;224967;224968;224969;224970 179122 179122 0 KPEDRPNTSEILR Unmodified 1553.8162 0.81616898 1091 P19525 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.763 31.95 3 0.013756 34906 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.211 37.181 207820000 0 0 0 8384700 7530300 19911000 18812000 9786000 15493000 16999000 19343000 19280000 26568000 19359000 26354000 26722 1091 24394 224971;224972;224973;224974;224975;224976;224977;224978;224979;224980;224981;224982 179123;179124;179125;179126;179127 179123 4 KPEDWDEEMDGEWEPPVIQNPEYK Oxidation (M) 2975.2807 0.28073406 1225 P27797 CALR Calreticulin yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2 0 6 3 1 2 82.169 78.603 3 2.0162E-109 98867 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 164.42 163.3 464390000 225230000 81045000 158110000 0 0 0 0 0 0 0 0 0 0 0 0 26723 1225 24395 224983;224984;224985;224986;224987;224988 179128;179129;179130;179131;179132;179133;179134;179135 179129 1798 8 KPEDWDEEMDGEWEPPVIQNPEYK Unmodified 2959.2858 0.28581943 1225 P27797 CALR Calreticulin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.12 0.331 7 1 3 2 3 87.006 82.037 2;3;4 3.9927E-24 100652 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 101.3 99.509 321870000 42787000 110640000 168450000 0 0 0 0 0 0 0 0 0 0 0 0 26724 1225 24395 224989;224990;224991;224992;224993;224994;224995;224996 179136;179137;179138;179139;179140;179141;179142;179143;179144;179145;179146;179147 179143 12 KPEEITPENHVEGTAR Unmodified 1805.8908 0.89079049 5298 Q9Y6X8 ZHX2 Zinc fingers and homeoboxes protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 24.272 24.465 3 6.7201E-05 26101 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 66.965 51.081 31680000 0 0 0 0 3771100 0 5262600 3347800 0 0 0 0 8745900 4972800 5579900 26725 5298 24396 224997;224998;224999;225000;225001;225002;225003 179148;179149;179150;179151;179152;179153;179154;179155;179156 179148 9 KPEENPASK Unmodified 998.50327 0.50327426 1166 P23588 EIF4B Eukaryotic translation initiation factor 4B yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 5.507 2.1981 2 1.0324E-05 4817 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 168.25 112.13 83847000 77939000 5907500 0 0 0 0 0 0 0 0 0 0 0 0 0 26726 1166 24397 225004;225005 179157;179158 179158 2 KPELVISYLPPGMASK Unmodified 1728.9484 0.94842871 1977 P78347 GTF2I General transcription factor II-I yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 81.607 80.91 3 0.00047876 93631 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 50.966 45.511 143260000 4834200 0 0 3674900 4755800 17098000 0 13115000 10919000 13468000 11068000 11860000 0 10816000 41651000 26727 1977 24398 225006;225007;225008;225009;225010;225011;225012;225013;225014;225015;225016 179159;179160;179161;179162;179163;179164;179165;179166;179167;179168 179161 10 KPELVISYLPPGMASK Oxidation (M) 1744.9433 0.94334333 1977 P78347 GTF2I General transcription factor II-I yes yes 0 1 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 74.436 74.545 2 0.0019547 85561 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.495 51.686 61315000 0 0 0 0 3693500 5463900 3399100 0 5845000 6160100 8225600 9974000 4773300 4953500 8827200 26728 1977 24398 225017;225018;225019;225020;225021;225022;225023;225024;225025;225026 179169;179170;179171;179172;179173 179171 3183 2 KPEMFETAIK Unmodified 1192.6162 0.61619553 1977 P78347 GTF2I General transcription factor II-I yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.43 3.14 5 1 24 1 3 2 2 2 2 2 2 2 2 2 2 2 2 2 48.825 47.871 2;3 3.9965E-20 53467 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 188.99 143.91 1908300000 262180000 204940000 145380000 74377000 70107000 107950000 78898000 78859000 61310000 160520000 58019000 138130000 134830000 133050000 199700000 26729 1977 24399 225027;225028;225029;225030;225031;225032;225033;225034;225035;225036;225037;225038;225039;225040;225041;225042;225043;225044;225045;225046;225047;225048;225049;225050;225051;225052;225053;225054;225055;225056 179174;179175;179176;179177;179178;179179;179180;179181;179182;179183;179184;179185;179186;179187;179188;179189;179190;179191;179192;179193;179194;179195;179196;179197;179198;179199;179200;179201 179191 11 KPEMFETAIK Oxidation (M) 1208.6111 0.61111015 1977 P78347 GTF2I General transcription factor II-I yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS 5.95 3.86 7 3 9 3 4 3 1 1 1 1 1 1 1 1 1 37.461 34.99 2;3 0.0006043 44960 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 97.456 87.452 875960000 233560000 120090000 201970000 0 0 37007000 33339000 25648000 22753000 0 44755000 65874000 29281000 24651000 37038000 26730 1977 24399 225057;225058;225059;225060;225061;225062;225063;225064;225065;225066;225067;225068;225069;225070;225071;225072;225073;225074;225075 179202;179203;179204;179205;179206;179207;179208;179209;179210;179211;179212;179213;179214;179215 179213 3184 10 KPENEMSGK Unmodified 1018.4753 0.47534495 5054 Q9UPQ0 LIMCH1 LIM and calponin homology domains-containing protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 5.4107 2.1703 2 0.043574 4101 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.213 61.193 30145000 0 30145000 0 0 0 0 0 0 0 0 0 0 0 0 0 26731 5054 24400 225076 179216 179216 1 KPENEVAQNGGAETSHTEPVSPIPK Unmodified 2615.2827 0.28272339 621 O95104 SCAF4 Splicing factor, arginine/serine-rich 15 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 2 2 2 2 2 2 1 2 2 2 2 41.036 41.233 3;4 6.4692E-28 46510 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 87.659 81.684 259480000 0 0 0 11464000 16992000 20542000 18839000 21406000 16818000 20570000 17666000 38130000 29056000 21450000 26546000 26732 621 24401 225077;225078;225079;225080;225081;225082;225083;225084;225085;225086;225087;225088;225089;225090;225091;225092;225093;225094;225095;225096;225097;225098 179217;179218;179219;179220;179221;179222;179223;179224;179225;179226;179227;179228;179229;179230;179231;179232;179233;179234;179235 179234 19 KPENSAESNTEETK Unmodified 1562.706 0.70600941 3820 Q96ER3 SAAL1 Protein SAAL1 yes yes 0 0 1 By MS/MS By matching By MS/MS 5.6 3.61 1 2 2 3 1 1 5.9964 4.0795 2;3 9.2908E-244 4951 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 269.7 203.43 39667000 0 33809000 0 0 0 0 2173400 0 0 0 0 0 0 0 3684500 26733 3820 24402 225099;225100;225101;225102;225103 179236;179237;179238 179236 3 KPEPDAREEQPTGPPAESR Unmodified 2090.0029 0.0028601316 2879 Q6GQQ9 OTUD7B OTU domain-containing protein 7B yes yes 0 0 2 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 22.294 22.456 4 0.016183 23390 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 29.444 21.084 51607000 0 0 0 0 4052300 4957200 4828700 3490700 3878600 5054300 9915700 15430000 0 0 0 26734 2879 24403 225104;225105;225106;225107;225108;225109;225110;225111 179239;179240 179239 2 KPEPPVNLK Unmodified 1020.5968 0.59678072 391 O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 36.805 31.865 2 0.013398 39844 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 154.28 111.44 209250000 130520000 25355000 53375000 0 0 0 0 0 0 0 0 0 0 0 0 26735 391 24404 225112;225113;225114 179241;179242 179242 1 KPEQIVDFLK Unmodified 1215.6863 0.68632401 2727 Q5H9R7 PPP6R3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 yes yes 0 0 1 By MS/MS By matching By matching By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 71.27 71.461 3 0.0023787 81382 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.452 37.876 18150000 0 0 0 0 0 3569000 0 0 0 1967600 0 1428800 1898900 2381800 6903900 26736 2727 24405 225115;225116;225117;225118;225119;225120 179243;179244 179244 2 KPESEGYLQEEK Unmodified 1435.6831 0.68308912 2698 Q53EZ4 CEP55 Centrosomal protein of 55 kDa yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.08 2.43 1 2 21 1 2 2 2 1 2 1 2 2 1 2 2 2 2 22.65 22.278 2;3 0.0018689 23187 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 37.94 29.896 160540000 162270 13486000 0 8883700 6389500 6424900 13233000 5915300 9153800 17959000 10607000 17038000 15114000 14847000 21321000 26737 2698 24406 225121;225122;225123;225124;225125;225126;225127;225128;225129;225130;225131;225132;225133;225134;225135;225136;225137;225138;225139;225140;225141;225142;225143;225144 179245;179246;179247;179248;179249;179250;179251;179252;179253;179254;179255 179250 8 KPESTSFSAPR Unmodified 1205.6041 0.60405094 4135 Q9BT25 HAUS8 HAUS augmin-like complex subunit 8 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 21.96 22.204 3 0.0083072 23177 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 40.516 27.9 62940000 0 0 0 5323400 0 0 8113400 9765300 0 12866000 0 12884000 0 0 13987000 26738 4135 24407 225145;225146;225147;225148;225149;225150 179256;179257;179258 179258 3 KPEYDLEEDDQEVLK Unmodified 1848.8629 0.86290398 2283 Q13416 ORC2 Origin recognition complex subunit 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 58.386 57.182 3 5.2513E-31 75822 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 102.64 90.844 216120000 29241000 45608000 0 0 11819000 10752000 12508000 12631000 7961700 9861300 13177000 16348000 16205000 8833100 21179000 26739 2283 24408 225151;225152;225153;225154;225155;225156;225157;225158;225159;225160;225161;225162;225163;225164 179259;179260;179261;179262;179263;179264;179265;179266;179267;179268;179269 179266 11 KPFMLDEEGDTQTEETQPSETK Oxidation (M) 2555.1221 0.12210815 1099 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.55 3.09 2 9 1 1 1 1 2 1 1 1 1 1 47.573 46.485 3 1.1708E-15 62478 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.957 92.43 62122000 9564200 0 3784700 4994300 4989700 5337000 5120300 3990700 0 0 7104000 9684000 0 0 7552900 26740 1099 24409 225165;225166;225167;225168;225169;225170;225171;225172;225173;225174;225175 179270;179271;179272;179273;179274 179272 1574 4 KPFMLDEEGDTQTEETQPSETK Unmodified 2539.1272 0.12719353 1099 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6 4 3 3 1 1 1 1 1 1 56.069 53.032 3 5.9936E-50 71521 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.48 93.673 41409000 15331000 15247000 2456200 0 1673000 0 3176000 3526500 0 0 0 0 0 0 0 26741 1099 24409 225176;225177;225178;225179;225180;225181 179275;179276;179277;179278;179279 179277 5 KPFPDFVYK Unmodified 1139.6015 0.60153174 2613 Q16555 DPYSL2 Dihydropyrimidinase-related protein 2 yes yes 0 0 1 By matching By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 64.758 65.093 3 0.0279 73487 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.908 28.078 14766000 0 0 0 0 0 0 0 0 0 0 2178400 2178100 624630 2235200 7549700 26742 2613 24410 225182;225183;225184;225185;225186 179280 179280 1 KPGDGEVSPSTEDAPFQHSPLGK Unmodified 2379.1343 0.13426824 395 O60318 MCM3AP Germinal-center associated nuclear protein yes yes 0 0 1 By MS/MS By matching By MS/MS By matching 8 3.46 1 3 1 1 1 1 57.991 57.382 3 0.005744 71949 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 22.7 18.445 15120000 0 0 2241900 0 0 0 0 0 0 3008800 0 5584200 0 0 4284800 26743 395 24411 225187;225188;225189;225190 179281;179282 179281 2 KPGDLSDELR Unmodified 1128.5775 0.57750184 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.474 34.657 2 0.009427 38637 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 113.93 75.688 1401000000 0 0 0 55676000 55147000 86070000 84243000 85741000 79389000 116390000 239960000 198710000 117640000 110150000 171860000 26744 2290 24412 225191;225192;225193;225194;225195;225196;225197;225198;225199;225200;225201;225202 179283;179284;179285;179286;179287;179288;179289;179290;179291 179291 6 KPGMPNVSNDLSQK Unmodified 1513.7559 0.75587691 2171 Q09472 EP300 Histone acetyltransferase p300 yes yes 0 0 1 By MS/MS 2 0 1 1 48.976 41.151 3 0.026567 57187 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 35.891 25.281 8077100 8077100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26745 2171 24413 225203 179292 179292 0 KPGPPLSPEIR Unmodified 1189.6819 0.68190733 3897 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 42.637 42.878 3 0.0016102 47165 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.044 24.014 89779000 0 0 0 0 7105600 5493800 9322500 5317800 5962700 6163800 9434200 10348000 11652000 6679800 12298000 26746 3897 24414 225204;225205;225206;225207;225208;225209;225210;225211;225212;225213;225214 179293;179294;179295;179296;179297;179298 179298 6 KPGPSGPSESPK Unmodified 1166.5932 0.5931519 3897 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 20 2 2 2 2 1 2 1 2 1 1 2 2 7.5521 7.6683 2;3 0.0029206 5288 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.65 32.564 120870000 0 0 0 4957900 7631900 7149900 7187400 2140700 9836100 4542400 40175000 4139300 3448800 12851000 16807000 26747 3897 24415 225215;225216;225217;225218;225219;225220;225221;225222;225223;225224;225225;225226;225227;225228;225229;225230;225231;225232;225233;225234 179299;179300;179301;179302;179303;179304;179305;179306;179307;179308;179309;179310 179303 4 KPGQSFQEQVEHYRDK Unmodified 1974.9548 0.95478773 244 O15042 U2SURP U2 snRNP-associated SURP motif-containing protein yes yes 0 0 2 By MS/MS By matching By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 38.256 38.631 4 0.038077 42826 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 28.723 23.295 47574000 0 0 0 0 0 8778700 0 0 0 0 8243800 12782000 11650000 6119100 0 26748 244 24416 225235;225236;225237;225238;225239 179311 179311 1 KPGREIELENDLK Unmodified 1539.8257 0.82567103 2582 Q15813 TBCE Tubulin-specific chaperone E yes yes 0 0 2 By MS/MS 2 0 1 1 52.164 44.15 4 0.0013511 60972 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.098 47.745 33405000 33405000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26749 2582 24417 225240 179312 179312 0 KPGTAVVEFATVK Unmodified 1345.7606 0.76055158 4671 Q9NVM6 DNAJC17 DnaJ homolog subfamily C member 17 yes yes 0 0 1 By MS/MS 2 0 2 2 66.059 57.764 2;3 0.001143 77916 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.95 41.765 32075000 32075000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26750 4671 24418 225241;225242 179313;179314;179315;179316 179314 3 KPGVSGHGVYELK Unmodified 1369.7354 0.73539946 3246 Q8IWV7 UBR1 E3 ubiquitin-protein ligase UBR1 yes yes 0 0 1 By MS/MS 2 0 1 1 39.33 32.768 3 1.314E-08 45540 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.62 85.683 37497000 37497000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26751 3246 24419 225243 179317;179318 179318 2 KPHIYYGSLEEK Unmodified 1462.7456 0.7456298 303 O43172 PRPF4 U4/U6 small nuclear ribonucleoprotein Prp4 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.53 1.88 1 16 1 1 1 2 1 2 1 1 1 1 2 2 1 38.377 38.09 3 8.4682E-08 39742 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.105 80.893 299940000 18873000 0 0 6428200 3462100 26107000 11140000 16761000 35181000 16657000 11513000 33463000 55756000 11339000 53262000 26752 303 24420 225244;225245;225246;225247;225248;225249;225250;225251;225252;225253;225254;225255;225256;225257;225258;225259;225260 179319;179320;179321;179322;179323;179324;179325;179326;179327;179328;179329 179322 8 KPHVVIATPGR Unmodified 1173.6982 0.6982261 5294 Q9Y6V7 DDX49 Probable ATP-dependent RNA helicase DDX49 yes yes 0 0 1 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 27.914 28.005 3 0.032106 29878 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 29.55 19.241 39312000 0 0 0 2874500 2075600 0 3371700 0 0 5353200 7581500 0 9808500 8246900 0 26753 5294 24421 225261;225262;225263;225264;225265;225266;225267 179330;179331 179331 2 KPHVVTVAGENR Unmodified 1305.7153 0.71533272 3038 Q7KZ85 SUPT6H Transcription elongation factor SPT6 yes yes 0 0 1 By MS/MS 10 0 1 1 14.966 15.438 3 0.004026 14241 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.511 33.298 7687400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7687400 26754 3038 24422 225268 179332 179332 1 KPIAGQVVTAMGK Unmodified 1298.738 0.738042 1558 P49023 PXN Paxillin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 44.174 44.26 3 0.010799 49500 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 24.929 4.8228 23288000 0 0 0 0 0 10375000 8209700 0 4703100 0 0 0 0 0 0 26755 1558 24423 225269;225270;225271 179333 179333 1 KPIDQRLEGIVNK Unmodified 1508.8675 0.86747627 4011 Q99460 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 47.404 47.828 3 0.0058077 53254 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 68.83 41.501 163850000 0 0 0 0 0 28415000 0 0 0 28512000 0 68802000 0 0 38122000 26756 4011 24424 225272;225273;225274;225275 179334;179335;179336 179336 2 KPIDYTVLDDVGHGVK Unmodified 1754.9203 0.9202997 3297 Q8IZP0 ABI1 Abl interactor 1 yes yes 0 0 1 By MS/MS 10 0 1 1 67.606 68.124 3 0.014279 77514 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.113 15.428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26757 3297 24425 225276 179337 179337 1 KPIEDPANDTVDFPK Unmodified 1684.8308 0.83081599 426 O60716 CTNND1 Catenin delta-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.27 3.17 3 3 20 1 5 1 2 2 2 2 2 1 1 1 2 2 2 57.682 56.454 2;3 6.992E-22 63267 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 134.99 125.99 449480000 13305000 123200000 0 15175000 18924000 29572000 22916000 30492000 18414000 26528000 22252000 25207000 25928000 29030000 48536000 26758 426 24426 225277;225278;225279;225280;225281;225282;225283;225284;225285;225286;225287;225288;225289;225290;225291;225292;225293;225294;225295;225296;225297;225298;225299;225300;225301;225302 179338;179339;179340;179341;179342;179343;179344;179345;179346;179347;179348;179349;179350;179351;179352;179353;179354;179355;179356;179357 179344 20 KPILLEGSPGVGK Unmodified 1293.7656 0.76563696 4641 Q9NU22 MDN1 Midasin yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 49.22 49.464 2;3 0.00024252 55910 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 55.196 52.353 57592000 0 0 0 0 8518600 0 7453500 0 6741000 0 0 10894000 14948000 0 9037100 26759 4641 24427 225303;225304;225305;225306;225307;225308 179358;179359;179360;179361;179362 179360 5 KPIPDEHLILK Unmodified 1301.7707 0.77072234 614 O94979 SEC31A Protein transport protein Sec31A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 3 9 1 1 1 1 1 1 1 1 1 1 1 1 52.966 51.626 3 8.6225E-05 56265 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 91.123 75.751 502710000 177160000 39116000 19876000 10510000 0 34304000 15063000 16074000 25637000 0 21487000 42335000 0 32294000 68856000 26760 614 24428 225309;225310;225311;225312;225313;225314;225315;225316;225317;225318;225319;225320 179363;179364;179365;179366;179367;179368;179369;179370;179371;179372;179373;179374;179375 179373 11 KPISLGHPGSLK Unmodified 1232.7241 0.7241065 3432 Q8NEY1 NAV1 Neuron navigator 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 31.53 31.83 3 0.00048228 33698 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.104 43.9 131560000 0 0 0 0 0 15996000 5252800 12659000 8110300 18341000 16975000 34157000 0 6527000 13543000 26761 3432 24429 225321;225322;225323;225324;225325;225326;225327;225328;225329 179376;179377;179378;179379;179380;179381;179382;179383 179382 8 KPITDDDVDR Unmodified 1172.5673 0.56733108 1720 P53618 COPB1 Coatomer subunit beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 14.731 14.929 3 0.00080284 14316 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 83.045 59.296 80274000 0 0 0 0 2666700 6498100 4579400 2694300 0 8102400 8925600 9405200 10581000 12414000 14408000 26762 1720 24430 225330;225331;225332;225333;225334;225335;225336;225337;225338;225339 179384;179385;179386;179387;179388;179389;179390;179391 179391 7 KPITDDDVDRISLCLK Unmodified 1886.9772 0.97716265 1720 P53618 COPB1 Coatomer subunit beta yes yes 0 0 2 By MS/MS 2 0 1 1 77.889 69.758 4 0.00031739 91794 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.576 52.177 10789000 10789000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26763 1720 24431 225340 179392 179392 1 KPITTGGVTYR Unmodified 1191.6612 0.66117189 2389 Q14192 FHL2 Four and a half LIM domains protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 26.178 26.378 2;3 0.002786 26839 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.21 95.845 415040000 0 0 0 17239000 23100000 34461000 25318000 22299000 20031000 35229000 52803000 60527000 31812000 31730000 60493000 26764 2389 24432 225341;225342;225343;225344;225345;225346;225347;225348;225349;225350;225351;225352;225353;225354;225355;225356;225357;225358;225359;225360;225361;225362;225363;225364 179393;179394;179395;179396;179397;179398;179399;179400;179401;179402;179403 179396 3 KPIVEQLSAATIEGQK Unmodified 1710.9516 0.95159983 2648 Q2KHR2 RFX7 DNA-binding protein RFX7 yes yes 0 0 1 By MS/MS 2 0 1 1 76.01 67.879 3 0.0095187 89465 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 30.536 10.932 13013000 13013000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26765 2648 24433 225365 179404 179404 1 KPIVPLDTQK Unmodified 1137.6758 0.67575932 1277 P30307 CDC25C M-phase inducer phosphatase 3 yes yes 0 0 1 By MS/MS 2 0 1 1 45.826 38.834 2 0.011151 53188 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 119.21 93.587 16668000 16668000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26766 1277 24434 225366 179405 179405 1 KPLFITTDSSK Unmodified 1235.6762 0.67615325 3061 Q7LBC6 KDM3B Lysine-specific demethylase 3B yes yes 0 0 1 By matching By MS/MS By matching 10 0 3 1 1 1 40.769 40.929 3 0.031135 45570 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 21.656 11.831 8058000 0 0 0 0 0 0 2120500 0 2318800 0 0 0 0 3618600 0 26767 3061 24435 225367;225368;225369 179406 179406 1 KPLLESGTLGTK Unmodified 1242.7184 0.71835242 1137 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 1 By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.905 41.083 3 0.0029135 45861 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 35.763 24.765 123230000 0 0 0 6156100 5619100 6462900 10301000 7467300 3080900 8694800 15467000 14312000 7924400 12144000 25605000 26768 1137 24436 225370;225371;225372;225373;225374;225375;225376;225377;225378;225379;225380;225381 179407;179408;179409;179410;179411;179412;179413 179408 6 KPLPDHVSIVEPK Unmodified 1457.8242 0.82421447 1156 P23396 RPS3 40S ribosomal protein S3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.85 3.88 1 5 2 12 4 2 2 1 1 1 1 1 1 1 1 1 1 1 1 53.756 52.098 3 1.4878E-25 62100 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 131.66 111.99 1949600000 889820000 56490000 71489000 31314000 35520000 86269000 30162000 36711000 51220000 89360000 83987000 116540000 118670000 119280000 132760000 26769 1156 24437 225382;225383;225384;225385;225386;225387;225388;225389;225390;225391;225392;225393;225394;225395;225396;225397;225398;225399;225400;225401 179414;179415;179416;179417;179418;179419;179420;179421;179422;179423;179424;179425;179426;179427;179428;179429;179430;179431;179432;179433;179434;179435;179436;179437 179429 17 KPLPDHVSIVEPKDEILPTTPISEQK Unmodified 2909.575 0.57498923 1156 P23396 RPS3 40S ribosomal protein S3 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.67 3.78 1 12 1 7 13 1 1 1 1 1 1 1 1 82.323 78.457 3;4;5 1.93E-192 97252 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 179.38 179.38 1209400000 1080900000 0 13224000 0 0 0 0 6579700 0 8570100 8785000 13274000 7224900 8011200 62885000 26770 1156 24438 225402;225403;225404;225405;225406;225407;225408;225409;225410;225411;225412;225413;225414;225415;225416;225417;225418;225419;225420;225421;225422 179438;179439;179440;179441;179442;179443;179444;179445;179446;179447;179448;179449;179450;179451;179452;179453;179454;179455;179456;179457;179458;179459;179460;179461 179445 23 KPLTSSSAAPQRPISTQR Unmodified 1924.049 0.049022463 2564 Q15691 MAPRE1 Microtubule-associated protein RP/EB family member 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 25.96 26.16 3;4 7.1155E-29 27975 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 115.34 108.11 1004700000 0 0 0 51151000 37863000 106700000 55490000 47223000 46040000 107460000 116850000 116060000 71042000 69651000 179160000 26771 2564 24439 225423;225424;225425;225426;225427;225428;225429;225430;225431;225432;225433;225434;225435;225436;225437;225438;225439;225440;225441;225442;225443;225444;225445;225446 179462;179463;179464;179465;179466;179467;179468;179469;179470;179471;179472;179473;179474;179475;179476;179477;179478;179479;179480;179481 179464 10 KPLTTSGFHHSEEGTSSSGSK Unmodified 2160.0083 0.00833944 2759 Q5SW79 CEP170 Centrosomal protein of 170 kDa yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 14.983 15.233 4 0.00043325 14207 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 25.935 17.116 62171000 0 0 0 0 0 2560300 3657000 0 0 8891200 6386200 7690300 14366000 0 18620000 26772 2759 24440 225447;225448;225449;225450;225451;225452;225453 179482;179483;179484 179483 3 KPLVEMDETPQVEK Unmodified 1641.8284 0.82837315 4672 Q9NVM9 ASUN Protein asunder homolog yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 7.86 3.4 1 1 5 2 1 1 1 1 1 53.634 51.839 3 5.2052E-30 67859 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.3 114.5 69773000 0 33560000 0 0 5170900 0 10114000 8719400 0 0 0 0 0 12208000 0 26773 4672 24441 225454;225455;225456;225457;225458;225459;225460 179485;179486;179487;179488;179489 179485 5 KPLVEMDETPQVEK Oxidation (M) 1657.8233 0.82328777 4672 Q9NVM9 ASUN Protein asunder homolog yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 41.586 37.207 3 0.0036309 46853 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 46.964 28.142 16028000 0 13172000 2855700 0 0 0 0 0 0 0 0 0 0 0 0 26774 4672 24441 225461;225462 179490 179490 6084 1 KPMDLSTVK Unmodified 1017.5529 0.55286699 5052 Q9UPN9 TRIM33 E3 ubiquitin-protein ligase TRIM33 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 33.952 29.142 2 0.012002 40874 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 103.01 42.11 66908000 59448000 0 7459800 0 0 0 0 0 0 0 0 0 0 0 0 26775 5052 24442 225463;225464 179491;179492 179491 1 KPMSLASGLVPAAPPK Unmodified 1562.8854 0.88543452 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 68.638 68.763 3 0.0036128 78109 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 23.991 13.143 41404000 0 0 0 0 2464000 2400300 0 4769400 0 5682700 0 9072000 0 4295900 12720000 26776 1226 24443 225465;225466;225467;225468;225469;225470;225471 179493;179494;179495;179496;179497;179498 179495 6 KPMVLGHEASGTVEK Oxidation (M) 1597.8134 0.81339179 2045 Q00796 SORD Sorbitol dehydrogenase yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 4 1 1 28.535 23.7 2;3;4 4.782E-49 33654 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 160.65 122.08 640530000 609820000 16301000 14409000 0 0 0 0 0 0 0 0 0 0 0 0 26777 2045 24444 225472;225473;225474;225475;225476;225477 179499;179500;179501;179502;179503;179504 179502 3307 4 KPMVLGHEASGTVEK Unmodified 1581.8185 0.81847717 2045 Q00796 SORD Sorbitol dehydrogenase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6 4 4 4 2 2 1 1 1 1 30.631 28.476 3;4 6.1201E-16 42038 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 115.8 82.869 658160000 584020000 0 11300000 0 0 0 0 0 0 0 17276000 10310000 0 11458000 23792000 26778 2045 24444 225478;225479;225480;225481;225482;225483;225484;225485 179505;179506;179507;179508;179509;179510 179505 5 KPNAETTVASEIK Unmodified 1386.7355 0.73545904 3107 Q7Z5K2 WAPAL Wings apart-like protein homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.59 2.96 3 2 22 3 2 2 2 1 2 2 1 2 2 2 2 2 2 35.909 35.265 2;3 4.3457E-07 45324 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 135.02 98.461 356940000 0 36601000 59353000 14090000 10126000 18150000 14140000 12378000 12420000 22003000 25521000 37139000 30725000 20338000 43955000 26779 3107 24445 225486;225487;225488;225489;225490;225491;225492;225493;225494;225495;225496;225497;225498;225499;225500;225501;225502;225503;225504;225505;225506;225507;225508;225509;225510;225511;225512 179511;179512;179513;179514;179515;179516;179517;179518;179519;179520;179521;179522 179518 7 KPNEGADGQWK Unmodified 1228.5836 0.58364985 3405 Q8NC51 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 12.506 12.657 2;3 2.1925E-05 11515 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 144.47 92.069 464050000 0 0 0 27195000 25329000 28672000 28377000 20309000 25346000 42157000 46311000 86503000 52896000 44600000 36355000 26780 3405 24446 225513;225514;225515;225516;225517;225518;225519;225520;225521;225522;225523;225524;225525;225526;225527;225528;225529;225530;225531;225532;225533;225534;225535;225536 179523;179524;179525;179526;179527;179528;179529;179530;179531;179532;179533;179534;179535;179536;179537;179538;179539 179537 12 KPNPLANSNTSGYSESK Unmodified 1792.8592 0.85915601 2424 Q14669 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 27.004 27.097 3 5.4244E-05 29127 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.495 40.641 35901000 0 0 0 6132600 5335100 7035000 3618000 0 0 0 4338700 9441100 0 0 0 26781 2424 24447 225537;225538;225539;225540;225541;225542 179540;179541;179542;179543 179540 4 KPNSVPQELAATTEK Unmodified 1611.8468 0.84680041 5054 Q9UPQ0 LIMCH1 LIM and calponin homology domains-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 2 24 1 1 2 2 2 2 2 2 2 2 2 2 2 2 42.173 41.884 2;3 3.7129E-27 46828 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 101.53 80.943 646830000 26377000 0 43110000 23287000 30866000 44467000 40115000 44075000 35914000 57202000 65854000 54951000 56318000 51129000 73161000 26782 5054 24448 225543;225544;225545;225546;225547;225548;225549;225550;225551;225552;225553;225554;225555;225556;225557;225558;225559;225560;225561;225562;225563;225564;225565;225566;225567;225568 179544;179545;179546;179547;179548;179549;179550;179551;179552;179553;179554;179555;179556;179557;179558;179559 179549 15 KPNTVSTSHSGSFAPNNPDLAK Unmodified 2268.1135 0.11347321 1523 P47736 RAP1GAP Rap1 GTPase-activating protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 46.808 39.33 3 0.00022642 54378 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.032 51.81 7999100 7999100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26783 1523 24449 225569 179560;179561 179560 2 KPPCCVLSNPDQK Unmodified 1541.733 0.73303298 2199 Q12857;Q14938 NFIA;NFIX Nuclear factor 1 A-type;Nuclear factor 1 X-type yes no 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 35.885 30.982 3 0.0017333 43074 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.726 37.294 49378000 44953000 0 4424300 0 0 0 0 0 0 0 0 0 0 0 0 26784 2199 24450 225570;225571 179562;179563 179562 2 KPPEADMNIFEDIGDYVPSTTK Oxidation (M) 2482.1574 0.15737144 2236 Q13123 IK Protein Red yes yes 0 1 1 By MS/MS 10 0 1 1 86.74 86.899 3 2.9602E-05 100431 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.632 41.709 3696100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3696100 26785 2236 24451 225572 179564 179564 3634 1 KPPITVDSVCLK Unmodified 1355.7483 0.74827234 4440 Q9H7Z6 KAT8 Histone acetyltransferase KAT8 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 65.65 59.623 3 0.0077355 80065 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 41.242 24.892 16701000 13914000 0 2786500 0 0 0 0 0 0 0 0 0 0 0 0 26786 4440 24452 225573;225574 179565 179565 1 KPPLAAALGEAEPPGPVDATDLPK Unmodified 2353.2529 0.25292681 555 O75909 CCNK Cyclin-K yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 80.959 81.062 3 1.2721E-06 93381 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.273 43.66 101650000 0 0 0 0 5512300 9996200 5015300 6991900 5392300 9908100 8797100 10385000 6910700 9945000 22798000 26787 555 24453 225575;225576;225577;225578;225579;225580;225581;225582;225583;225584;225585 179566;179567;179568;179569;179570;179571;179572;179573;179574;179575;179576;179577 179569 12 KPPLLDRPGEGSYNR Unmodified 1697.8849 0.88491725 3433 Q8NEY8 PPHLN1 Periphilin-1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 35.985 36.075 3 0.010741 38760 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 42.314 30.794 84836000 0 0 0 4551700 3850700 11427000 6827400 6127300 6767100 0 0 21735000 14365000 9185400 0 26788 3433 24454 225586;225587;225588;225589;225590;225591;225592;225593;225594 179578;179579 179579 1 KPPLLNNADSVQAK Unmodified 1493.8202 0.82019173 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.2 3.27 5 2 23 3 2 2 2 2 2 2 2 2 2 2 2 2 1 2 39.616 38.52 2;3 2.509E-31 42382 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 158.42 123.72 1993800000 377310000 49642000 135800000 68121000 58126000 136310000 101180000 95749000 82980000 146580000 186900000 170270000 133290000 26825000 224710000 26789 894 24455 225595;225596;225597;225598;225599;225600;225601;225602;225603;225604;225605;225606;225607;225608;225609;225610;225611;225612;225613;225614;225615;225616;225617;225618;225619;225620;225621;225622;225623;225624 179580;179581;179582;179583;179584;179585;179586;179587;179588;179589;179590;179591;179592;179593;179594;179595;179596;179597;179598;179599;179600;179601;179602 179581 15 KPPPPELDMAIK Oxidation (M) 1350.7217 0.72172323 3360 Q8N6N3 C1orf52 UPF0690 protein C1orf52 yes yes 0 1 1 By MS/MS 3 0 1 1 48.339 43.463 3 0.00093636 54200 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 75.479 67.069 6518900 0 6518900 0 0 0 0 0 0 0 0 0 0 0 0 0 26790 3360 24456 225625 179603 179603 4936 1 KPPPPELDMAIK Unmodified 1334.7268 0.72680861 3360 Q8N6N3 C1orf52 UPF0690 protein C1orf52 yes yes 0 0 1 By matching By MS/MS 2 0 2 1 1 64.734 58.706 3 0.047628 72550 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 25.234 22.023 7674700 3220500 0 4454200 0 0 0 0 0 0 0 0 0 0 0 0 26791 3360 24456 225626;225627 179604 179604 0 KPPPVPALPSK Unmodified 1129.6859 0.68593008 2401 Q14258 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.494 45.663 2 0.037374 51153 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 61.161 23.075 90317000 0 0 0 6392900 4429600 7088000 4855600 5453900 5391100 10298000 9784800 6447900 6643400 9676200 13856000 26792 2401 24457 225628;225629;225630;225631;225632;225633;225634;225635;225636;225637;225638;225639 179605 179605 1 KPPTDEELK Unmodified 1055.5499 0.5498901 1365 P35659 DEK Protein DEK yes yes 0 0 1 By matching By MS/MS 3 0 2 1 1 18.026 14.09 2 0.0039343 17459 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 140.11 55.614 94662000 232340 94430000 0 0 0 0 0 0 0 0 0 0 0 0 0 26793 1365 24458 225640;225641 179606;179607;179608;179609 179606 4 KPPVKPPTEPIGFDLEIEK Unmodified 2133.1722 0.17215729 5009 Q9ULW0 TPX2 Targeting protein for Xklp2 yes yes 0 0 2 By MS/MS 2 0 1 1 84.207 76.076 4 0.0084452 99452 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 33.405 31.369 6469100 6469100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26794 5009 24459 225642 179610 179610 1 KPPVTFAEK Unmodified 1015.5702 0.57023162 2370 Q14134 TRIM29 Tripartite motif-containing protein 29 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 34.837 29.987 2 0.034994 42135 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 91.584 51.316 92941000 81688000 0 11253000 0 0 0 0 0 0 0 0 0 0 0 0 26795 2370 24460 225643;225644 179611 179611 0 KPQDQLVIER Unmodified 1224.6826 0.68263561 3573 Q8WWI1 LMO7 LIM domain only protein 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.94 35.122 3 0.0020736 37361 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.906 47.01 304520000 0 0 0 24416000 18809000 22743000 19414000 14339000 21891000 24021000 32542000 31363000 39783000 23569000 31633000 26796 3573 24461 225645;225646;225647;225648;225649;225650;225651;225652;225653;225654;225655;225656 179612;179613;179614;179615;179616;179617 179613 5 KPQDQLVIERER Unmodified 1509.8263 0.82633974 3573 Q8WWI1 LMO7 LIM domain only protein 7 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 30.374 30.677 3 0.0023183 33273 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 101.89 90.626 179950000 0 0 0 0 0 11966000 17482000 12406000 9907900 21553000 16110000 27456000 18208000 15306000 29559000 26797 3573 24462 225657;225658;225659;225660;225661;225662;225663;225664;225665;225666 179618;179619 179618 0 KPQLTQEELEAK Unmodified 1412.7511 0.75110911 2200 Q12872 SFSWAP Splicing factor, suppressor of white-apricot homolog yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching 9 2.65 1 7 1 1 1 1 1 1 1 1 34.189 33.977 3 0.00043253 37206 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 55.261 37.246 73267000 0 0 2943400 0 6659700 4608700 0 12430000 0 8944900 17863000 11060000 0 0 8757800 26798 2200 24463 225667;225668;225669;225670;225671;225672;225673;225674 179620;179621;179622;179623;179624 179621 2 KPQTLMELHQEK Unmodified 1480.7708 0.77079869 652 O95391 SLU7 Pre-mRNA-splicing factor SLU7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 31.739 31.309 3 0.0011821 31795 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.75 42.084 80630000 19316000 0 0 0 0 5670400 0 0 4394300 5159000 7418300 11521000 6023400 5947300 15180000 26799 652 24464 225675;225676;225677;225678;225679;225680;225681;225682;225683 179625;179626;179627;179628;179629 179627 5 KPRPPPALGPEETSASAGLPK Unmodified 2099.1375 0.13750312 2049 Q01105 SET Protein SET yes yes 0 0 2 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.24 2.35 2 19 2 1 1 2 2 1 2 1 2 1 2 2 2 52.272 51.662 3;4 8.603E-09 71779 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.361 65.72 526670000 54700000 0 0 10960000 6281700 40648000 17827000 12937000 32303000 25778000 77960000 33616000 54992000 54332000 104340000 26800 2049 24465 225684;225685;225686;225687;225688;225689;225690;225691;225692;225693;225694;225695;225696;225697;225698;225699;225700;225701;225702;225703;225704 179630;179631;179632;179633;179634;179635;179636;179637;179638;179639;179640;179641;179642;179643;179644 179638 10 KPRPSEGDEDCLPASK Unmodified 1784.8363 0.83631208 1976 P78346 RPP30 Ribonuclease P protein subunit p30 yes yes 0 0 2 By MS/MS By MS/MS 2 0 3 2 1 23.011 18.759 3;4 0.00058957 27054 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 91.657 73.561 103640000 91458000 0 12187000 0 0 0 0 0 0 0 0 0 0 0 0 26801 1976 24466 225705;225706;225707 179645;179646;179647;179648;179649 179647 4 KPSAAPEAGASALPNPPALK Unmodified 1886.0262 0.026161756 1406 P39880 CUX1 Homeobox protein cut-like 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62.505 61.731 3 4.0635E-28 70044 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 78.794 75.3 181970000 11480000 0 3397800 7942500 10473000 15127000 10241000 11462000 9603100 14598000 17299000 20463000 17224000 12775000 19885000 26802 1406 24467 225708;225709;225710;225711;225712;225713;225714;225715;225716;225717;225718;225719;225720;225721 179650;179651;179652;179653;179654;179655;179656;179657;179658;179659;179660;179661;179662;179663;179664;179665;179666;179667 179655 18 KPSAGDDFDLGDAVVDGENDDPRPPNPPK Unmodified 3033.3952 0.39518696 995 P14209 CD99 CD99 antigen yes yes 0 0 2 By MS/MS By MS/MS By MS/MS 4 3.46 3 1 2 1 1 74.309 71.611 3;4 0.0015759 88226 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 30.855 28.661 41129000 9675200 0 15089000 0 0 0 0 16365000 0 0 0 0 0 0 0 26803 995 24468 225722;225723;225724;225725 179668;179669;179670;179671 179671 3 KPSDEEFASRK Unmodified 1292.6361 0.63607935 2379 Q14155 ARHGEF7 Rho guanine nucleotide exchange factor 7 yes yes 0 0 2 By MS/MS 10 0 1 1 8.5181 8.877 3 0.02391 6974 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 60.364 52.3 13005000 0 0 0 0 0 0 0 0 0 0 13005000 0 0 0 0 26804 2379 24469 225726 179672 179672 1 KPSDGSPDTKPSR Unmodified 1370.679 0.6790068 3653 Q92733 PRCC Proline-rich protein PRCC yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 5.6461 5.7258 3 1.2228E-10 3717 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 104.41 81.297 89280000 0 0 0 11637000 9338700 0 20729000 10454000 0 0 17777000 10572000 0 8773400 0 26805 3653 24470 225727;225728;225729;225730;225731;225732;225733;225734 179673;179674;179675;179676;179677 179675 3 KPSEIQQVNNPELGLSR Unmodified 1908.0065 0.0064889465 3581 Q8WX93 PALLD Palladin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 1 2 2 2 54.541 54.65 2;3 6.0697E-32 61317 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 120.9 115.47 679980000 0 0 0 37274000 35577000 43402000 59251000 45757000 37039000 59211000 76804000 55741000 50334000 66669000 112920000 26806 3581 24471 225735;225736;225737;225738;225739;225740;225741;225742;225743;225744;225745;225746;225747;225748;225749;225750;225751;225752;225753;225754;225755;225756;225757 179678;179679;179680;179681;179682;179683;179684;179685;179686;179687;179688;179689;179690;179691;179692;179693;179694;179695;179696;179697;179698;179699;179700 179686 23 KPSGALGSESYK Unmodified 1222.6194 0.61936665 4469 Q9H9B1 EHMT1 Histone-lysine N-methyltransferase EHMT1 yes yes 0 0 1 By MS/MS By matching 2 0 2 1 1 22.201 18.312 2 3.7139E-06 26307 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 136.02 77.105 14067000 11529000 0 2537500 0 0 0 0 0 0 0 0 0 0 0 0 26807 4469 24472 225758;225759 179701 179701 1 KPSHTSAVSIAGK Unmodified 1281.7041 0.70409934 4505 Q9HC35 EML4 Echinoderm microtubule-associated protein-like 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 13.257 13.406 3 0.033869 12618 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 25.448 12.818 32215000 0 0 0 3145100 2876500 0 3594500 2036600 0 3780000 4218900 0 3197900 2259100 7106100 26808 4505 24473 225760;225761;225762;225763;225764;225765;225766;225767;225768 179702;179703 179702 1 KPSISITTESLK Unmodified 1302.7395 0.73948179 4976 Q9UKV3 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7 3.87 3 5 2 1 1 1 1 1 1 54.184 51.149 2;3 0.00066884 57065 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 50.222 40.535 96503000 56255000 0 0 0 0 0 0 11840000 0 0 13884000 0 0 0 14525000 26809 4976 24474 225769;225770;225771;225772;225773;225774;225775;225776 179704;179705;179706;179707;179708;179709;179710;179711 179709 7 KPSLTAVIDK Unmodified 1070.6336 0.63356015 2558 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 0 0 1 By MS/MS 10 0 1 1 43.422 43.766 2 0.04002 49076 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 71.159 18.07 14287000 0 0 0 0 0 0 0 0 0 0 0 0 14287000 0 0 26810 2558 24475 225777 179712 179712 1 KPSPSESPEPWKPFPAVSPEPR Unmodified 2445.2329 0.23286007 3897 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 0 0 2 By MS/MS 10 0 1 1 70.494 70.929 4 0.0080231 81028 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 27.408 19.017 5651600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5651600 26811 3897 24476 225778 179713 179713 1 KPSQTASYER Unmodified 1165.5728 0.57275081 3542 Q8WUF5 PPP1R13L RelA-associated inhibitor yes yes 0 0 1 By matching By matching By matching By matching By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 7.0493 7.1441 3 0.029761 5300 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 31.843 11.853 38275000 0 0 0 0 5046100 3523900 5596400 3166700 5928000 0 10867000 4146800 0 0 0 26812 3542 24477 225779;225780;225781;225782;225783;225784;225785 179714 179714 1 KPSSEERETEISLK Unmodified 1631.8366 0.83662965 505 O75475 PSIP1 PC4 and SFRS1-interacting protein yes yes 0 0 2 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.024 27.222 3 0.0030277 29165 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 59.709 46.29 142850000 0 0 0 4831700 4288200 20621000 5140500 4533700 11712000 13203000 12040000 20942000 15504000 9143900 20893000 26813 505 24478 225786;225787;225788;225789;225790;225791;225792;225793;225794;225795;225796;225797 179715;179716;179717;179718 179717 2 KPSVGVPPPASPSYPR Unmodified 1634.878 0.87804096 4802 Q9P206 KIAA1522 Uncharacterized protein KIAA1522 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 47.926 48.033 3 0.0053604 54019 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 30.418 19.313 12983000 0 0 0 0 0 6864100 0 0 6118500 0 0 0 0 0 0 26814 4802 24479 225798;225799 179719;179720 179720 2 KPSVSEEVQATPNK Unmodified 1512.7784 0.77838649 4968 Q9UKJ3 GPATCH8 G patch domain-containing protein 8 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 23.936 24.082 3 0.0090267 25921 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 33.008 20.213 36650000 0 0 0 2615600 2514600 0 3366500 3700200 2750200 4285600 0 7523900 5048900 4844300 0 26815 4968 24480 225800;225801;225802;225803;225804;225805;225806;225807;225808 179721;179722;179723;179724;179725;179726 179726 4 KPTDGASSSNCVTDISHLVR Unmodified 2143.0328 0.032780052 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 1 2 2 2 2 2 2 59.968 60.072 3;4 4.5081E-21 68412 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 105.96 102.35 653960000 0 0 0 16503000 14353000 34323000 26111000 34072000 9501600 47584000 73144000 89107000 40618000 66210000 202440000 26816 1564 24481 225809;225810;225811;225812;225813;225814;225815;225816;225817;225818;225819;225820;225821;225822;225823;225824;225825;225826;225827;225828;225829;225830;225831 179727;179728;179729;179730;179731;179732;179733;179734;179735;179736;179737;179738;179739;179740;179741;179742 179733 11 KPTMYPEWK Oxidation (M) 1194.5743 0.57433072 2116 Q05655 PRKCD Protein kinase C delta type;Protein kinase C delta type regulatory subunit;Protein kinase C delta type catalytic subunit yes yes 0 1 1 By MS/MS 2 0 1 1 42.474 35.738 3 0.034396 49298 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.297 34.338 6868300 6868300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26817 2116 24482 225832 179743 179743 0 KPTPIQLNPAPDGSAVNGTSSAETNLEALQK Unmodified 3147.6048 0.60478581 2079 Q02750 MAP2K1 Dual specificity mitogen-activated protein kinase kinase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 76.351 76.453 3 1.0146E-71 87888 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 106.44 100.54 110480000 0 0 0 0 4434500 14124000 5377400 6769900 0 17737000 15478000 10371000 5160200 8905200 22120000 26818 2079 24483 225833;225834;225835;225836;225837;225838;225839;225840;225841;225842 179744;179745;179746;179747;179748;179749;179750;179751;179752;179753;179754 179747 11 KPTSAKPSSTTPR Unmodified 1356.7361 0.73612775 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 0 2 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 5.7392 5.8566 3 0.00012013 3822 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 85.457 69.701 74691000 0 0 0 7972300 6198200 1522400 7438800 5222600 1299300 5967200 7500500 7278200 5453700 7347400 11490000 26819 1226 24484 225843;225844;225845;225846;225847;225848;225849;225850;225851;225852;225853;225854 179755;179756;179757;179758;179759;179760;179761;179762 179761 8 KPTSQIPETK Unmodified 1127.6186 0.61863837 4096 Q9BQG0 MYBBP1A Myb-binding protein 1A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 13.73 13.893 2 0.025508 12565 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.662 48.513 29703000 0 0 0 1968100 1562100 1481200 1620200 0 1005600 3280300 2870700 3739400 3473400 3671100 5030600 26820 4096 24485 225855;225856;225857;225858;225859;225860;225861;225862;225863;225864;225865 179763;179764;179765 179764 3 KPTTDEGTASSEVNATEEMSTLVNYIEPVK Unmodified 3239.5391 0.53913359 2067 Q01970 PLCB3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 yes yes 0 0 1 By MS/MS 2 0 1 1 94.209 91.715 3 0.0023129 110998 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 28.223 21.928 2173400 0 0 2173400 0 0 0 0 0 0 0 0 0 0 0 0 26821 2067 24486 225866 179766 179766 1 KPTVSIMEPGETRR Unmodified 1599.8403 0.84027524 2370 Q14134 TRIM29 Tripartite motif-containing protein 29 yes yes 0 0 2 By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 36.377 36.658 3 0.04973 39658 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 40.025 21.929 32770000 0 0 0 2219600 0 0 0 3556700 0 3121200 0 9172800 4482000 3636700 6581100 26822 2370 24487 225867;225868;225869;225870;225871;225872;225873 179767 179767 0 KPTWMCPVCDK Unmodified 1420.6301 0.63014781 3316 Q8N2W9 PIAS4 E3 SUMO-protein ligase PIAS4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 79.26 79.381 3 0.012162 91636 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 29.936 12.534 403950000 0 0 0 0 0 185290000 94540000 0 0 0 124120000 0 0 0 0 26823 3316 24488 225874;225875;225876 179768;179769;179770 179768 3 KPVADYFL Unmodified 951.50657 0.50656873 1811 P60510 PPP4C Serine/threonine-protein phosphatase 4 catalytic subunit yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 81.319 77.68 2 0.015061 93941 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 107.66 100.53 118170000 0 71430000 46741000 0 0 0 0 0 0 0 0 0 0 0 0 26824 1811 24489 225877;225878 179771 179771 0 KPVAGALDVSFNK Unmodified 1344.7402 0.74015049 4040 Q99627 COPS8 COP9 signalosome complex subunit 8 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 55.822 56.234 2 0.00073455 62960 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 105.03 68.338 21943000 0 0 0 0 0 0 0 0 0 0 0 3392900 5723200 4183800 8643100 26825 4040 24490 225879;225880;225881;225882 179772 179772 1 KPVEAESVEGVVR Unmodified 1397.7514 0.75144346 3871 Q96HW7 INTS4 Integrator complex subunit 4 yes yes 0 0 1 By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching 10 0 8 1 1 1 1 1 1 1 1 40.533 40.66 3 0.0295 45075 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 17.253 6.328 58618000 0 0 0 6734600 0 7286700 4680800 9247200 0 8260300 8427600 0 9439900 4541000 0 26826 3871 24491 225883;225884;225885;225886;225887;225888;225889;225890 179773 179773 1 KPVIVFVPSR Unmodified 1140.7019 0.70191449 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 1 By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 60.853 61.104 3 0.0053575 69232 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 40.154 34.658 29476000 0 0 0 0 0 2571200 3186100 0 1790600 2135900 2025300 5511400 4454900 2684500 5116000 26827 528 24492 225891;225892;225893;225894;225895;225896;225897;225898;225899 179774;179775;179776 179776 2 KPVIVFVPSRK Unmodified 1268.7969 0.79687751 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 47.797 47.926 3 0.010267 52487 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 65.695 62.393 87920000 0 0 0 4455300 2439500 14505000 6950200 4224900 10926000 4779400 0 16795000 8479400 0 14366000 26828 528 24493 225900;225901;225902;225903;225904;225905;225906;225907;225908;225909 179777;179778;179779 179779 1 KPVTVSPTTPTSPTEGEAS Unmodified 1884.9317 0.93165225 5282 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.162 43.339 2 4.1061E-25 48203 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 131.06 121.87 137210000 0 0 0 8743500 8732700 12109000 11117000 11401000 0 11558000 14844000 19981000 9891300 11528000 17305000 26829 5282 24494 225910;225911;225912;225913;225914;225915;225916;225917;225918;225919;225920;225921 179780;179781;179782;179783;179784;179785;179786;179787;179788;179789;179790;179791 179785 12 KPVVNIITPSHVEER Unmodified 1716.9523 0.95226853 2629 Q16719 KYNU Kynureninase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 49.574 50.098 3 0.0002203 55933 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 62.525 56.227 295120000 0 0 0 0 0 0 0 0 0 0 56318000 40451000 0 29950000 168400000 26830 2629 24495 225922;225923;225924;225925 179792;179793;179794;179795 179794 4 KPVVPSVPMASPAPGR Unmodified 1588.8759 0.87593247 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 0 1 By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 60.365 60.45 3 0.0043994 68304 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 34.928 28.2 40566000 0 0 0 2500000 2047400 4147800 3262900 0 0 0 7894700 5829700 4390200 4272500 6220400 26831 4139 24496 225926;225927;225928;225929;225930;225931;225932;225933;225934 179796;179797 179796 2 KPVVPSVPMASPAPGR Oxidation (M) 1604.8708 0.87084709 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 1 1 By MS/MS By MS/MS 10 0 2 1 1 50.019 50.071 3 0.0011619 55947 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 42.818 33.53 35294000 0 0 0 5418200 0 0 0 0 0 0 0 29876000 0 0 0 26832 4139 24496 225935;225936 179798 179798 5628 1 KPYCNAHYPK Unmodified 1276.6023 0.6022768 2452 Q14847 LASP1 LIM and SH3 domain protein 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.87 3 5 2 1 1 1 1 1 1 12.481 11.314 2;3 0.00058256 9465 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 89.08 77.979 564430000 436820000 0 2528700 2434500 0 0 0 0 0 0 18939000 32998000 0 15153000 55556000 26833 2452 24497 225937;225938;225939;225940;225941;225942;225943;225944 179799;179800;179801;179802;179803;179804;179805;179806 179806 7 KPYIWEYSR Unmodified 1240.6241 0.6240581 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 54.051 54.24 3 0.0084 60087 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.386 31.63 55734000 0 0 0 3413500 0 5212300 4348300 6645000 3734600 4490300 7018100 8671500 0 0 12201000 26834 848 24498 225945;225946;225947;225948;225949;225950;225951;225952;225953 179807;179808;179809;179810 179808 4 KPYPDDENLVEVK Unmodified 1544.7722 0.77223848 1771 P55786;A6NEC2 NPEPPS;NPEPPSL1 Puromycin-sensitive aminopeptidase;Puromycin-sensitive aminopeptidase-like protein yes no 0 0 1 By MS/MS 10 0 1 1 48.811 49.534 3 0.017399 54836 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 18.614 13.272 19388000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19388000 26835 1771 24499 225954 179811 179811 1 KPYPEDPAVYKPLSQEELQR Unmodified 2386.2169 0.21687565 675 O95628 CNOT4 CCR4-NOT transcription complex subunit 4 yes yes 0 0 2 By MS/MS By MS/MS 10 0 2 1 1 62.023 62.383 4 1.6524E-20 70499 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.45 79.36 22323000 0 0 0 0 0 0 0 0 0 7251800 0 0 0 0 15072000 26836 675 24500 225955;225956 179812 179812 1 KQAGPASVPLRTEEEFK Unmodified 1885.9898 0.98977625 1270 P30101 PDIA3 Protein disulfide-isomerase A3 yes yes 0 0 2 By MS/MS By matching 2 0 3 2 1 58.18 51.404 3;4 0.015418 69703 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 32.688 27.298 1546600000 1471400000 0 75206000 0 0 0 0 0 0 0 0 0 0 0 0 26837 1270 24501 225957;225958;225959 179813;179814;179815 179814 3 KQDEEERELR Unmodified 1330.6477 0.64770667 2945 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.4285 7.5507 3 0.034338 5964 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 61.353 52.142 281410000 0 0 0 8191600 11197000 9388400 15786000 17550000 12073000 22262000 72642000 635110 38745000 36425000 36516000 26838 2945 24502 225960;225961;225962;225963;225964;225965;225966;225967;225968;225969;225970;225971 179816;179817 179816 0 KQDEEINQIEEERTK Unmodified 1887.9174 0.91739917 4430 Q9H788 SH2D4A SH2 domain-containing protein 4A yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS 6 4 2 2 1 1 1 1 34.547 32.256 3 5.7349E-06 34052 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 86.214 79.798 117160000 17915000 0 81306000 0 0 0 0 0 0 0 12016000 0 0 5926500 0 26839 4430 24503 225972;225973;225974;225975 179818;179819;179820;179821 179821 4 KQDEPIDLFMIEIMEMK Oxidation (M) 2125.0145 0.014535716 1410 P40227 CCT6A T-complex protein 1 subunit zeta yes yes 0 1 1 By MS/MS By MS/MS By matching 2.17 0.373 5 1 3 2 1 98.577 92.752 2;3 4.2292E-69 118122 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 168.5 156.52 270470000 249390000 19785000 1290900 0 0 0 0 0 0 0 0 0 0 0 0 26840 1410 24504 225976;225977;225978;225979;225980;225981 179822;179823;179824;179825;179826 179826 2213;2214;2215 5 KQDEPIDLFMIEIMEMK Unmodified 2109.0196 0.019621094 1410 P40227 CCT6A T-complex protein 1 subunit zeta yes yes 0 0 1 By MS/MS By MS/MS 2 0.707 1 2 1 3 1 103.32 100.53 3 3.0597E-13 120381 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 108.49 105.89 201230000 191000000 10231000 0 0 0 0 0 0 0 0 0 0 0 0 0 26841 1410 24504 225982;225983;225984;225985 179827;179828;179829;179830;179831 179831 5 KQDEPIDLFMIEIMEMK 2 Oxidation (M) 2141.0095 0.0094503383 1410 P40227 CCT6A T-complex protein 1 subunit zeta yes yes 0 2 1 By MS/MS 2 0 2 2 96.717 88.586 3 1.215E-10 113877 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 106.28 101.46 47593000 47593000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26842 1410 24504 225986;225987 179832;179833;179834 179833 2213;2214;2215 3 KQDFDEDDILK Unmodified 1364.646 0.64597533 437 O60841 EIF5B Eukaryotic translation initiation factor 5B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.12 0.331 7 1 3 3 2 59.534 53.414 2;3 0.00083585 72089 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 99.539 70.24 113820000 49840000 59327000 4650300 0 0 0 0 0 0 0 0 0 0 0 0 26843 437 24505 225988;225989;225990;225991;225992;225993;225994;225995 179835;179836;179837;179838;179839;179840;179841 179839 5 KQDLSSSLTDDSK Unmodified 1422.6838 0.6838174 4584 Q9NR09 BIRC6 Baculoviral IAP repeat-containing protein 6 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 30.307 25.912 3 0.036848 32402 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 31.827 23.916 64232000 0 64232000 0 0 0 0 0 0 0 0 0 0 0 0 0 26844 4584 24506 225996;225997 179842 179842 1 KQDPPVTHDLR Unmodified 1304.6837 0.68369824 1191 P25685 DNAJB1 DnaJ homolog subfamily B member 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 17.711 17.899 3 0.00024676 16187 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.522 61.646 442100000 0 0 0 24338000 15747000 21221000 25419000 29403000 16824000 44625000 36754000 54334000 35704000 49866000 87870000 26845 1191 24507 225998;225999;226000;226001;226002;226003;226004;226005;226006;226007;226008;226009 179843;179844;179845;179846;179847;179848;179849;179850;179851;179852;179853;179854 179846 11 KQDRIFPPETSASVAATPPPSTASAPAAVNSSASADK Unmodified 3623.8067 0.80673309 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 0 2 By MS/MS 2 0 1 1 75.34 67.21 4 5.8825E-35 88697 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.965 72.259 26731000 26731000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26846 894 24508 226010 179855;179856 179856 2 KQEAEENEITEK Unmodified 1446.6838 0.6838174 1420 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 13.377 13.615 2;3 0.00021112 16157 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.97 68.112 31521000 0 0 0 0 1733200 0 0 1036300 2526300 0 4462000 5221800 4760300 3569100 8212300 26847 1420 24509 226011;226012;226013;226014;226015;226016;226017;226018;226019 179857;179858 179857 2 KQEDFMTTMDANEEK 2 Oxidation (M) 1847.7553 0.75534414 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 2 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 19.813 19.717 3 0.00047321 20315 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 44.925 42.781 11723000 0 0 0 0 2635900 6139900 2947500 0 0 0 0 0 0 0 0 26848 2047 24510 226020;226021;226022 179859 179859 3322;3323 1 KQEDFMTTMDANEEK Unmodified 1815.7655 0.7655149 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.83 2.61 1 5 1 1 1 1 1 1 48.548 47.973 3 0.0038259 59518 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 50.155 28.854 34866000 0 3223500 0 0 2232900 6036300 0 0 0 0 5611500 6986000 0 0 10775000 26849 2047 24510 226023;226024;226025;226026;226027;226028 179860;179861;179862 179862 3 KQEDFMTTMDANEEK Oxidation (M) 1831.7604 0.76042952 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 1 1 By MS/MS 2.5 0.5 1 1 2 35.499 30.804 3 0.00056519 40358 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.104 56.389 25848000 0 25848000 0 0 0 0 0 0 0 0 0 0 0 0 0 26850 2047 24510 226029;226030 179863 179863 3322;3323 1 KQEDGEEYVCPMELGQASGSASK Unmodified 2499.0894 0.089368232 3180 Q86W92 PPFIBP1 Liprin-beta-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.209 61.309 3 9.6212E-35 69947 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 87.748 87.263 192210000 0 0 0 7030300 7196900 8974500 7990700 26495000 8657100 15615000 19510000 20768000 13561000 15066000 41344000 26851 3180 24511 226031;226032;226033;226034;226035;226036;226037;226038;226039;226040;226041;226042 179864;179865;179866;179867;179868;179869;179870;179871;179872;179873;179874;179875;179876;179877;179878;179879;179880;179881;179882;179883 179877 20 KQEDGEEYVCPMELGQASGSASK Oxidation (M) 2515.0843 0.084282854 3180 Q86W92 PPFIBP1 Liprin-beta-1 yes yes 0 1 1 By MS/MS 10 0 1 1 51.232 50.702 3 4.3005E-09 57807 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 58.952 55.22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26852 3180 24511 226043 179884 179884 4801 1 KQEDSVTELTVEDSGESLEDLMAK Oxidation (M) 2668.2273 0.2273015 4311 Q9GZZ9 UBA5 Ubiquitin-like modifier-activating enzyme 5 yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 80.564 75.212 3 6.0783E-132 96302 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 187.79 179.45 33271000 22772000 0 10499000 0 0 0 0 0 0 0 0 0 0 0 0 26853 4311 24512 226044;226045 179885;179886;179887;179888;179889 179886 5772 5 KQEDSVTELTVEDSGESLEDLMAK Unmodified 2652.2324 0.23238688 4311 Q9GZZ9 UBA5 Ubiquitin-like modifier-activating enzyme 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 90.376 84.478 3 4.4563E-126 106357 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 180.66 178.08 144660000 94105000 34844000 15712000 0 0 0 0 0 0 0 0 0 0 0 0 26854 4311 24512 226046;226047;226048;226049 179890;179891 179890 2 KQEEEVSTLRK Unmodified 1345.7201 0.72014333 4891 Q9UH92 MLX Max-like protein X yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.742 11.862 3 0.012339 9674 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 52.788 46.839 132630000 0 0 0 5469100 6689500 9644200 11747000 13226000 8529100 14310000 0 19705000 14067000 11519000 17726000 26855 4891 24513 226050;226051;226052;226053;226054;226055;226056;226057;226058;226059;226060 179892;179893;179894;179895 179894 0 KQEELETLQSINK Unmodified 1558.8203 0.82025131 2240 Q13137 CALCOCO2 Calcium-binding and coiled-coil domain-containing protein 2 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 54.723 49.371 3 0.00066439 60817 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 66.004 51.559 20034000 0 20034000 0 0 0 0 0 0 0 0 0 0 0 0 0 26856 2240 24514 226061;226062 179896 179896 1 KQEELVQQVR Unmodified 1255.6884 0.68844927 707 O95983 MBD3 Methyl-CpG-binding domain protein 3 yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 25.917 26.026 3 0.015935 27265 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 37.717 21.085 22372000 0 0 0 2703300 1633800 0 3361000 0 1749100 3043400 3402000 0 3153800 3326000 0 26857 707 24515 226063;226064;226065;226066;226067;226068;226069;226070 179897 179897 1 KQEESADARAPSGK Unmodified 1472.7219 0.72193424 2228 Q13045 FLII Protein flightless-1 homolog yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 5.9172 6.0346 3 7.0758E-11 4203 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 83.499 58.779 64896000 0 0 0 5058000 3730800 3950200 5620700 5659200 4325900 6284500 6933400 7566700 5617100 4577400 5571800 26858 2228 24516 226071;226072;226073;226074;226075;226076;226077;226078;226079;226080;226081;226082 179898;179899;179900;179901;179902;179903;179904;179905;179906;179907;179908 179903 11 KQEETAVLEEDSADWEK Unmodified 2005.9116 0.91164509 3732 Q96A49 SYAP1 Synapse-associated protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.66 2.95 4 1 24 2 2 1 2 2 2 2 2 2 2 2 2 2 2 2 59.951 58.973 2;3 2.4386E-14 66275 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.767 76.982 760560000 50936000 82227000 6701600 22913000 25421000 30523000 30687000 45762000 34103000 52518000 77274000 61002000 61847000 47442000 131200000 26859 3732 24517 226083;226084;226085;226086;226087;226088;226089;226090;226091;226092;226093;226094;226095;226096;226097;226098;226099;226100;226101;226102;226103;226104;226105;226106;226107;226108;226109;226110;226111 179909;179910;179911;179912;179913;179914;179915;179916;179917;179918;179919;179920;179921;179922;179923;179924;179925;179926;179927 179914 19 KQEFLEK Unmodified 920.49673 0.49673232 4390;1804 Q9H444;P59074 CHMP4B;CHMP4BP1 Charged multivesicular body protein 4b;Putative charged multivesicular body protein 4B-like protein CHMP4BP1 no no 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 21.618 18.093 2 0.0037925 22492 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 194.44 79.662 210410000 0 83472000 126930000 0 0 0 0 0 0 0 0 0 0 0 0 26860 4390;1804 24518 226112;226113;226114 179928;179929;179930 179929 1 KQEFLEQK Unmodified 1048.5553 0.55530983 4241 Q9BY43 CHMP4A Charged multivesicular body protein 4a yes yes 0 0 1 By MS/MS By MS/MS 5 3.56 1 1 1 2 1 21.859 19.359 2 0.011517 26609 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 186.76 108.15 105640000 0 94461000 0 0 0 0 0 0 0 0 0 11180000 0 0 0 26861 4241 24519 226115;226116;226117 179931;179932;179933 179931 1 KQEGPATQVSK Unmodified 1171.6197 0.619701 2289 Q13428 TCOF1 Treacle protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.3 2.25 2 21 1 1 1 2 1 2 1 2 2 2 2 2 2 2 7.4196 7.2405 2;3 1.1193E-08 8619 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 141.08 88.602 133420000 4119600 15075000 0 0 4749700 2786000 4679200 3840300 5960300 16215000 27634000 11929000 11426000 7299600 17704000 26862 2289 24520 226118;226119;226120;226121;226122;226123;226124;226125;226126;226127;226128;226129;226130;226131;226132;226133;226134;226135;226136;226137;226138;226139;226140 179934;179935;179936;179937;179938;179939;179940;179941;179942;179943 179936 10 KQEGPGPEDARK Unmodified 1310.6579 0.65787742 3908 Q96KM6 ZNF512B Zinc finger protein 512B yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 6.0818 6.2075 3 0.029908 4269 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 59.975 47.762 30492000 0 0 0 3232600 2879000 0 3641600 1968300 0 2709000 4096300 3400400 3695900 1771800 3097400 26863 3908 24521 226141;226142;226143;226144;226145;226146;226147;226148;226149;226150 179944;179945 179945 2 KQEGTPEGLYL Unmodified 1233.6241 0.62411768 1875 P62191 PSMC1 26S protease regulatory subunit 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64.281 63.356 2 0.00017945 81642 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.71 94.082 1092400000 25336000 597630000 0 30300000 37835000 30036000 18905000 14037000 10707000 67411000 74039000 114140000 13158000 16326000 42538000 26864 1875 24522 226151;226152;226153;226154;226155;226156;226157;226158;226159;226160;226161;226162;226163;226164 179946;179947;179948;179949;179950;179951;179952;179953 179947 4 KQELDEHEK Unmodified 1154.5568 0.5567664 28 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 5.9876 3.2649 3 0.0044901 5166 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 80.755 53.866 129290000 0 25483000 103800000 0 0 0 0 0 0 0 0 0 0 0 0 26865 28 24523 226165;226166 179954 179954 1 KQELEEICHDLEAR Unmodified 1768.8414 0.84139745 1356 P35579 MYH9 Myosin-9 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 2 2 2 1 1 1 1 1 59.896 60.06 3 0.00023334 67770 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 54.812 52.742 264780000 0 0 0 1303000 0 31178000 4351000 18271000 19355000 19435000 16528000 28278000 16983000 19311000 89790000 26866 1356 24524 226167;226168;226169;226170;226171;226172;226173;226174;226175;226176;226177;226178;226179;226180 179955;179956;179957;179958;179959;179960;179961;179962;179963;179964 179959 9 KQELEVLTANIQDLK Unmodified 1740.9622 0.96216452 4502 Q9HBM1 SPC25 Kinetochore protein Spc25 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 4.25 3.34 2 1 1 2 1 1 82.621 80.069 3 0.0042478 95853 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 39.143 32.573 42459000 0 28107000 4558900 0 0 0 0 0 0 0 0 0 0 0 9792400 26867 4502 24525 226181;226182;226183;226184 179965;179966;179967;179968;179969 179969 4 KQELLEALTK Unmodified 1171.6812 0.68123863 973 P12956 XRCC6 X-ray repair cross-complementing protein 6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.57 3.6 8 3 24 4 4 3 2 2 2 2 2 2 2 2 2 2 2 2 60.833 59.133 2;3 3.032E-28 83677 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 203.02 132.17 3866200000 2051500000 377850000 287830000 43827000 58344000 87716000 85930000 71284000 83954000 99545000 129570000 80400000 102850000 121650000 183920000 26868 973 24526 226185;226186;226187;226188;226189;226190;226191;226192;226193;226194;226195;226196;226197;226198;226199;226200;226201;226202;226203;226204;226205;226206;226207;226208;226209;226210;226211;226212;226213;226214;226215;226216;226217;226218;226219 179970;179971;179972;179973;179974;179975;179976;179977;179978;179979;179980;179981;179982;179983;179984;179985;179986;179987;179988;179989;179990;179991;179992;179993;179994;179995;179996;179997;179998;179999;180000;180001;180002;180003;180004;180005;180006;180007;180008;180009 179988 27 KQELQDERDSLAAQLEITLTK Unmodified 2428.2809 0.28093247 455 O75116 ROCK2 Rho-associated protein kinase 2 yes yes 0 0 2 By MS/MS 2 0 1 1 89.84 81.71 4 0.003529 106155 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 35.421 28.145 7136800 7136800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26869 455 24527 226220 180010 180010 1 KQELQPGTAYK Unmodified 1261.6667 0.6666512 1663 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.43 3.14 5 1 24 2 3 1 2 2 2 2 2 2 2 2 2 2 2 2 21.77 21.057 2;3 9.4916E-107 21426 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 214.82 168.69 1206800000 43290000 189740000 10858000 51791000 39999000 46230000 64256000 59528000 50534000 77185000 115890000 135990000 109500000 85525000 126450000 26870 1663 24528 226221;226222;226223;226224;226225;226226;226227;226228;226229;226230;226231;226232;226233;226234;226235;226236;226237;226238;226239;226240;226241;226242;226243;226244;226245;226246;226247;226248;226249;226250 180011;180012;180013;180014;180015;180016;180017;180018;180019;180020;180021;180022;180023;180024;180025;180026;180027;180028;180029;180030;180031;180032;180033;180034;180035;180036;180037;180038;180039;180040 180013 19 KQEVDILDLK Unmodified 1199.6762 0.67615325 4621 Q9NS87 KIF15 Kinesin-like protein KIF15 yes yes 0 0 1 By MS/MS 3 0 1 1 70.59 65.997 3 0.038009 80621 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 33.088 4.8838 2821000 0 2821000 0 0 0 0 0 0 0 0 0 0 0 0 0 26871 4621 24529 226251 180041 180041 1 KQEVDLQQLIR Unmodified 1368.7725 0.77251325 400 O60443 DFNA5 Non-syndromic hearing impairment protein 5 yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 69.31 69.522 3 0.014724 79093 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 26.659 14.39 27066000 0 0 0 0 0 2243300 0 1751700 0 3489300 3121000 3886300 4788300 3484500 4301700 26872 400 24530 226252;226253;226254;226255;226256;226257;226258;226259 180042;180043;180044 180043 3 KQEVQAWDGEVR Unmodified 1443.7106 0.71064128 1488 P45974 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 37.879 38.16 3 0.0023708 41100 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.222 44.502 31383000 0 0 0 2348900 0 0 2806300 4277500 0 0 7132100 9468400 0 0 5349500 26873 1488 24531 226260;226261;226262;226263;226264;226265 180045;180046;180047;180048 180046 4 KQGGLGPMNIPLVSDPK Unmodified 1749.9447 0.94474031 2131 Q06830 PRDX1 Peroxiredoxin-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 79.117 78.028 3 0.0043106 100258 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 25.988 19.978 85819000 38852000 0 0 3607400 0 0 0 4732400 0 0 8453200 9918700 0 6360300 13895000 26874 2131 24532 226266;226267;226268;226269;226270;226271;226272 180049;180050 180049 2 KQGGLGPMNIPLVSDPKR Oxidation (M) 1922.0408 0.040765963 2131 Q06830 PRDX1 Peroxiredoxin-1 yes yes 0 1 2 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 60.59 60.578 4 0.00073896 68968 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 49.993 40.578 39830000 0 0 0 4257400 2086600 0 2455800 0 0 5766900 7592100 17671000 0 0 0 26875 2131 24533 226273;226274;226275;226276;226277;226278 180051;180052 180051 3434 2 KQISDVERDVQNFPAATDEK Unmodified 2289.1237 0.12370355 417 O60610 DIAPH1 Protein diaphanous homolog 1 yes yes 0 0 2 By MS/MS 2 0 1 1 77.329 69.198 4 0.030408 91280 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 24.011 15.651 21152000 21152000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26876 417 24534 226279 180053 180053 1 KQISNLQQSISDAEQR Unmodified 1843.9388 0.93880331 780 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 1 1 2 2 2 2 2 2 1 1 48.388 48.602 2;3 5.1351E-83 54180 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 184.76 171.1 + 1768700000 0 0 0 326940000 80566000 69684000 57108000 0 58452000 246180000 183580000 394320000 218000000 98658000 35231000 26877 780 24535 226280;226281;226282;226283;226284;226285;226286;226287;226288;226289;226290;226291;226292;226293;226294;226295;226296 180054;180055;180056;180057;180058;180059;180060;180061;180062;180063;180064;180065;180066;180067;180068;180069 180066 16 KQISNLQQSISDAEQRGENALK Unmodified 2456.2619 0.26192836 780 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 2 By MS/MS 10 0 2 2 72.943 73.127 3;4 0.011361 84301 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 24.901 21.169 + 24343000 0 0 0 0 0 0 0 24343000 0 0 0 0 0 0 0 26878 780 24536 226297;226298 180070;180071 180070 2 KQLMWLLNR Unmodified 1200.6801 0.68013319 2944 Q6PCT2 FBXL19 F-box/LRR-repeat protein 19 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 19.626 19.898 3 0.038271 19975 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 27.742 10.375 124670000 0 0 0 0 0 0 0 74626000 1546400 18816000 8014400 0 14911000 6754800 0 26879 2944 24537 226299;226300;226301;226302;226303;226304 180072 180072 1 KQNADPQAVTMPATETK Oxidation (M) 1844.8938 0.89382695 5031 Q9UNF1 MAGED2 Melanoma-associated antigen D2 yes yes 0 1 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 23.473 23.834 3 2.8562E-05 24482 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 72.932 69.297 31978000 0 0 0 3308900 0 0 0 3534400 0 0 4017100 10110000 4762100 0 6245300 26880 5031 24538 226305;226306;226307;226308;226309;226310 180073;180074;180075;180076 180075 6379 4 KQPAFPASYIPPSPPTPPVPVPPPTLPK Unmodified 2916.6153 0.6153379 3025 Q70E73 RAPH1 Ras-associated and pleckstrin homology domains-containing protein 1 yes yes 0 0 1 By MS/MS 10 0 1 1 89.838 89.976 3 6.5766E-08 104133 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.629 32.265 1675700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1675700 26881 3025 24539 226311 180077 180077 1 KQPALDVLYDVMK Unmodified 1518.8116 0.81160087 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 92.426 85.906 3 0.014183 108995 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 30.483 23.193 21708000 15070000 6638300 0 0 0 0 0 0 0 0 0 0 0 0 0 26882 2378 24540 226312;226313 180078;180079 180079 2 KQPDEEPMDMVVEK Oxidation (M) 1689.759 0.75897296 405 O60502 MGEA5 Protein O-GlcNAcase yes yes 0 1 1 By MS/MS 2 0 1 1 41.983 36.887 3 0.0020744 47992 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 55.186 43.666 15668000 0 15668000 0 0 0 0 0 0 0 0 0 0 0 0 0 26883 405 24541 226314 180080 180080 507;508 1 KQPDEEPMDMVVEK Unmodified 1673.7641 0.76405833 405 O60502 MGEA5 Protein O-GlcNAcase yes yes 0 0 1 By MS/MS By MS/MS 6.5 3.5 1 1 1 1 55.949 53.868 3 0.013675 59857 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 25.024 19.12 12815000 0 4673100 0 0 0 0 0 0 0 0 0 0 0 0 8142400 26884 405 24541 226315;226316 180081;180082 180081 2 KQPDEEPMDMVVEK 2 Oxidation (M) 1705.7539 0.75388758 405 O60502 MGEA5 Protein O-GlcNAcase yes yes 0 2 1 By MS/MS 3 0 1 1 26.531 22.316 3 0.0043605 27872 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 43.03 32.958 4678000 0 4678000 0 0 0 0 0 0 0 0 0 0 0 0 0 26885 405 24541 226317 180083 180083 507;508 1 KQPPQIESFYPPLDEPSIGSK Unmodified 2356.1951 0.19507758 448 O60934 NBN Nibrin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 80.021 80.124 3 0.0014211 92793 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 32.227 27.789 75185000 0 0 0 0 2259700 6619900 3511200 6941000 3879200 10574000 6652200 10411000 5083000 5579400 13674000 26886 448 24542 226318;226319;226320;226321;226322;226323;226324;226325;226326;226327;226328 180084 180084 1 KQPPVSPGTALVGSQK Unmodified 1592.8886 0.88860564 1048 P17096 HMGA1 High mobility group protein HMG-I/HMG-Y yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 42.539 42.489 3 0.029139 46757 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 34.395 21.628 91145000 0 0 0 8844500 10637000 11410000 15420000 0 9851500 14496000 0 0 0 20486000 0 26887 1048 24543 226329;226330;226331;226332;226333;226334;226335 180085 180085 0 KQPSLPLSEDAHPSVAK Unmodified 1802.9527 0.95266246 4983 Q9UL15 BAG5 BAG family molecular chaperone regulator 5 yes yes 0 0 1 By MS/MS By MS/MS 2 0 4 2 2 54.822 48.772 3;4 0.00046726 61092 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 66.289 55.822 188350000 158860000 0 29492000 0 0 0 0 0 0 0 0 0 0 0 0 26888 4983 24544 226336;226337;226338;226339 180086;180087;180088;180089 180088 2 KQPSVLVTFPK Unmodified 1242.7336 0.73360855 472 O75179 ANKRD17 Ankyrin repeat domain-containing protein 17 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.862 61.962 3 0.001993 70251 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 57.175 53.034 208340000 0 0 0 10304000 7839700 11368000 18098000 13313000 14675000 15637000 20663000 26321000 18394000 20710000 31018000 26889 472 24545 226340;226341;226342;226343;226344;226345;226346;226347;226348;226349;226350;226351 180090;180091;180092;180093;180094;180095;180096;180097;180098;180099 180097 5 KQPTPQPPVDCVK Unmodified 1492.7708 0.77079869 1160 P23490 LOR Loricrin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 12 2 1 1 1 1 1 1 1 1 1 1 34.103 34.189 2;3 0.00013356 38023 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 75.89 65.537 211330000 0 0 0 120920000 11342000 5970500 18670000 9062000 6598300 5977800 7372400 7689900 12297000 5435400 0 26890 1160 24546 226352;226353;226354;226355;226356;226357;226358;226359;226360;226361;226362;226363 180100;180101;180102;180103;180104 180102 4 KQQLEVELR Unmodified 1141.6455 0.64552182 1029 P15924 DSP Desmoplakin yes yes 0 0 1 By MS/MS By matching 10 0 2 1 1 39.137 39.593 3 0.032179 44275 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 28.956 14.838 7844100 0 0 0 0 0 0 0 4290700 0 0 0 3553400 0 0 0 26891 1029 24547 226364;226365 180105 180105 1 KQTALVELLK Unmodified 1141.7071 0.70705945 65 CON__P02769 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 65.498 65.585 2;3 0.012808 75930 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 99.973 52.399 + 147520000 0 0 0 17003000 13131000 5826800 12071000 9011800 7500900 15881000 15493000 20993000 10345000 8781200 11486000 26892 65 24548 226366;226367;226368;226369;226370;226371;226372;226373;226374;226375;226376;226377;226378;226379;226380;226381;226382;226383;226384;226385;226386;226387;226388;226389 180106;180107;180108;180109;180110 180110 1 KQTALVELVK Unmodified 1127.6914 0.69140938 64 CON__P02768-1;P02768 ALB Serum albumin yes no 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 51.979 51.74 2 0.006032 58194 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 120.65 67.786 + 323460000 0 0 0 34177000 0 0 0 289280000 0 0 0 0 0 0 0 26893 64 24549 226390;226391 180111;180112 180111 2 KQTGSGPLGNSYVER Unmodified 1591.7954 0.79543354 4872 Q9UER7 DAXX Death domain-associated protein 6 yes yes 0 0 1 By MS/MS By matching 10 0 2 1 1 34.789 34.881 3 0.0026444 38355 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 24.706 9.806 4641700 0 0 0 0 0 0 2835300 0 1806400 0 0 0 0 0 0 26894 4872 24550 226392;226393 180113 180113 1 KQVFDQYVK Unmodified 1153.6132 0.61315906 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 39.088 39.288 3 0.0023502 43417 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 60.828 48.039 72853000 0 0 0 4825700 6472800 0 6840000 6804300 0 6400000 7425000 15507000 6925400 5363800 6288900 26895 213 24551 226394;226395;226396;226397;226398;226399;226400;226401;226402;226403 180114;180115;180116;180117;180118;180119 180116 6 KRDEEEEEASGLK Unmodified 1518.7162 0.71618016 2895 Q6N069 NAA16 N-alpha-acetyltransferase 16, NatA auxiliary subunit yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.41 2.1 2 25 1 1 2 3 3 2 2 3 3 3 1 1 1 1 12.335 12.207 2;3;4 4.5914E-53 11474 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 198.52 179.44 1049500000 13178000 0 9800000 20437000 34567000 109630000 50815000 70096000 86416000 176060000 177280000 293510000 2380900 2246000 3088900 26896 2895 24552 226404;226405;226406;226407;226408;226409;226410;226411;226412;226413;226414;226415;226416;226417;226418;226419;226420;226421;226422;226423;226424;226425;226426;226427;226428;226429;226430 180120;180121;180122;180123;180124;180125;180126;180127;180128;180129;180130;180131;180132;180133;180134;180135;180136;180137;180138 180123 14 KRDIPDYLCGK Unmodified 1363.6918 0.69182009 5029 Q9UNE7 STUB1 E3 ubiquitin-protein ligase CHIP yes yes 0 0 2 By matching By MS/MS By MS/MS 10 0 3 1 1 1 39.707 40.359 3 0.03029 43618 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.275 42.241 23451000 0 0 0 0 0 0 0 0 0 0 4215000 6887000 0 0 12349000 26897 5029 24553 226431;226432;226433 180139 180139 1 KRDLEQAISQR Unmodified 1342.7317 0.73171107 2099 Q04206 RELA Transcription factor p65 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.734 26.93 3 0.027046 29039 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 48.568 20.285 78374000 0 0 0 3134700 2157200 5970000 4234300 4730500 4680400 6319500 7183800 11068000 8837800 6923400 13134000 26898 2099 24554 226434;226435;226436;226437;226438;226439;226440;226441;226442;226443;226444;226445 180140 180140 0 KRDVETLQQTIEEK Unmodified 1715.9054 0.90537792 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 2 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 42.938 42.383 3 5.1445E-11 45815 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 102.9 71.906 66622000 12065000 0 0 0 0 0 3537100 3788000 0 5721200 6814400 9211100 10585000 5077100 9822600 26899 2446 24555 226446;226447;226448;226449;226450;226451;226452;226453;226454 180141;180142;180143;180144 180142 4 KREAEEVYR Unmodified 1178.6044 0.60438529 5141 Q9Y383 LUC7L2 Putative RNA-binding protein Luc7-like 2 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 8.0717 8.1986 3 0.017802 5711 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 122.28 104.81 414190000 0 0 0 18251000 14861000 13209000 19157000 21279000 22291000 29827000 85652000 70854000 38918000 30399000 49488000 26900 5141 24556 226455;226456;226457;226458;226459;226460;226461;226462;226463;226464;226465;226466 180145;180146;180147;180148;180149;180150;180151;180152;180153;180154 180147 2 KREEEEEEEASEK Unmodified 1620.7115 0.71148872 384 O60231 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 5.8917 5.5533 3 2.0103E-50 3921 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 182.37 158.54 367050000 59176000 0 93252000 19181000 10656000 19166000 15621000 0 13109000 21198000 19869000 17881000 20272000 18636000 39028000 26901 384 24557 226467;226468;226469;226470;226471;226472;226473;226474;226475;226476;226477;226478;226479 180155;180156;180157;180158;180159;180160;180161;180162;180163;180164;180165;180166 180163 12 KREEILEEIAK Unmodified 1356.7613 0.76127986 2 A0AV96 RBM47 RNA-binding protein 47 yes yes 0 0 2 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 2 48.432 48.806 3 0.0024332 55302 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 103.43 87.888 216680000 0 0 0 0 0 12935000 0 16217000 26894000 16471000 23358000 20358000 31887000 12649000 55909000 26902 2 24558 226480;226481;226482;226483;226484;226485;226486;226487;226488;226489 180167;180168;180169 180169 2 KREESYLSNSQTPER Unmodified 1822.881 0.88095408 3098 Q7Z4H7 HAUS6 HAUS augmin-like complex subunit 6 yes yes 0 0 2 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 21.808 22.053 3 0.0035222 23140 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 64.565 53.295 30171000 0 0 0 0 0 4493800 0 0 3909000 4391500 6160200 0 5597000 5619100 0 26903 3098 24559 226490;226491;226492;226493;226494;226495;226496 180170;180171;180172;180173;180174 180174 3 KREGELTVAQGR Unmodified 1342.7317 0.73171107 2094 Q03252 LMNB2 Lamin-B2 yes yes 0 0 2 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 14.66 14.857 3 0.029012 14556 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 41.401 31.613 43736000 0 0 0 4233400 0 1607400 2208200 4116500 1681500 3949800 7702900 6664700 3215300 2453300 5903700 26904 2094 24560 226497;226498;226499;226500;226501;226502;226503;226504;226505;226506;226507 180175 180175 0 KREIYDQFGEEGLK Unmodified 1710.8577 0.85769944 4868 Q9UDY4 DNAJB4 DnaJ homolog subfamily B member 4 yes yes 0 0 2 By MS/MS 2 0 1 1 62.066 53.81 3 3.6541E-11 72872 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.981 88.942 26030000 26030000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26905 4868 24561 226508 180176 180176 0 KRELAAGAFGTK Unmodified 1247.6986 0.69862003 2411 Q14527 HLTF Helicase-like transcription factor yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 25.367 25.566 3 0.0010814 27147 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 81.803 67.109 667360000 0 0 0 24739000 19029000 36821000 66806000 78882000 48954000 60752000 62001000 71955000 58411000 56953000 82059000 26906 2411 24562 226509;226510;226511;226512;226513;226514;226515;226516;226517;226518;226519;226520 180177;180178;180179;180180;180181;180182;180183;180184;180185;180186;180187;180188 180183 6 KREMDDVAIEDEVLEQLFK Oxidation (M) 2322.1413 0.14132745 448 O60934 NBN Nibrin yes yes 0 1 2 By MS/MS 2 0 1 1 97.908 89.777 4 0.00062759 115913 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.726 39.539 23678000 23678000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26907 448 24563 226521 180189 180189 569 1 KREMDDVAIEDEVLEQLFK Unmodified 2306.1464 0.14641283 448 O60934 NBN Nibrin yes yes 0 0 2 By MS/MS 2 0 1 1 98.551 90.42 3 7.6325E-06 116615 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.264 73.01 18328000 18328000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26908 448 24563 226522 180190 180190 1 KREYENELAK Unmodified 1278.6568 0.65681479 1029 P15924 DSP Desmoplakin yes yes 0 0 2 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.355 13.51 3 0.006467 12897 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 107.55 83.263 343590000 0 0 0 56072000 11392000 14488000 22880000 76522000 1426700 17850000 20484000 41478000 49197000 15669000 16132000 26909 1029 24564 226523;226524;226525;226526;226527;226528;226529;226530;226531;226532;226533;226534 180191;180192;180193;180194;180195 180194 1 KRNEELK Unmodified 915.51378 0.51377937 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 2 By matching By MS/MS By matching 2 0 3 1 1 1 9.4779 6.3896 1 0.032509 9079 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 35.105 0 147280000 126940000 18919000 1421300 0 0 0 0 0 0 0 0 0 0 0 0 26910 3676 24565 226535;226536;226537 180196 180196 1 KRPAPQQIQQVQQQAVQNR Unmodified 2244.2199 0.21994439 3856 Q96GM5 SMARCD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 yes yes 0 0 2 By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 2 1 1 36.857 37.195 3;4 0.00062926 40603 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 58.159 49.558 46223000 0 0 0 0 0 4617200 3104700 3567600 2698400 3942400 0 14039000 0 3334300 10919000 26911 3856 24566 226538;226539;226540;226541;226542;226543;226544;226545;226546 180197;180198 180198 1 KRPEPVPIQK Unmodified 1190.7135 0.71354181 3283 Q8IYH5 ZZZ3 ZZ-type zinc finger-containing protein 3 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 19.065 19.07 3 0.034167 19614 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 71.349 19.071 59741000 0 0 0 6709400 10629000 9452000 8513900 5736100 5935500 12764000 0 0 0 0 0 26912 3283 24567 226547;226548;226549;226550;226551;226552;226553 180199;180200;180201;180202 180202 0 KRPETVATQFK Unmodified 1303.7248 0.72483478 121 O00159 MYO1C Unconventional myosin-Ic yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 21.665 21.868 3 0.039189 22210 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 46.796 38.096 108330000 0 0 0 0 0 12874000 20652000 8616400 11505000 15524000 12229000 0 20860000 6074300 0 26913 121 24568 226554;226555;226556;226557;226558;226559;226560;226561 180203 180203 1 KRPFEESETEQNNSSQPSK Unmodified 2221.0247 0.024717786 5219 Q9Y546 LRRC42 Leucine-rich repeat-containing protein 42 yes yes 0 0 2 By MS/MS 2 0 1 1 22.188 17.292 3 0.0060408 24801 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.708 41.42 14322000 14322000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26914 5219 24569 226562 180204 180204 1 KRPLENDGPVK Unmodified 1251.6935 0.69353465 1106 P20585 MSH3 DNA mismatch repair protein Msh3 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.86 2.8 1 6 1 1 1 1 1 1 1 14.283 13.821 3 0.018537 21811 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.951 53.747 92431000 40114000 0 0 0 6497700 0 0 0 0 11736000 6852800 0 8364100 6597100 12269000 26915 1106 24570 226563;226564;226565;226566;226567;226568;226569 180205;180206 180205 0 KRPMSQISGVK Oxidation (M) 1245.6863 0.68634078 2159 Q08499 PDE4D cAMP-specific 3',5'-cyclic phosphodiesterase 4D yes yes 0 1 2 By MS/MS 10 0 1 1 7.5731 7.932 3 0.011393 5897 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 57.885 40.518 10824000 0 0 0 0 0 0 0 0 0 0 10824000 0 0 0 0 26916 2159 24571 226570 180207 180207 3470 1 KRPMSQISGVK Unmodified 1229.6914 0.69142616 2159 Q08499 PDE4D cAMP-specific 3',5'-cyclic phosphodiesterase 4D yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 16.847 17.27 3 0.043095 16391 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 53.08 35.271 51940000 0 0 0 0 0 0 0 0 0 0 6818200 9635500 6914000 11073000 17499000 26917 2159 24571 226571;226572;226573;226574;226575 180208 180208 0 KSDFQVNLNNASR Unmodified 1491.743 0.74300404 426 O60716 CTNND1 Catenin delta-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 43.475 43.465 3 0.0025742 48676 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 30.959 21.116 36980000 0 0 0 9163300 0 0 0 8814400 0 0 0 0 19002000 0 0 26918 426 24572 226576;226577;226578 180209;180210;180211;180212 180209 4 KSDIDEIVLVGGSTR Unmodified 1587.8468 0.84680041 932 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.69 1.54 1 25 1 1 1 2 2 2 3 2 2 2 2 3 3 69.517 69.543 2;3 0.00044093 80925 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 52.887 52.887 606900000 0 0 4115800 18927000 12084000 31761000 23929000 27437000 25212000 33503000 54854000 81704000 36725000 40907000 215750000 26919 932 24573 226579;226580;226581;226582;226583;226584;226585;226586;226587;226588;226589;226590;226591;226592;226593;226594;226595;226596;226597;226598;226599;226600;226601;226602;226603;226604 180213;180214;180215;180216;180217;180218;180219;180220;180221;180222;180223;180224;180225;180226;180227;180228;180229;180230;180231;180232;180233;180234;180235;180236;180237;180238;180239 180239 23 KSDIDEIVLVGGSTRIPK Unmodified 1926.0786 0.078591257 932 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 2 By MS/MS 2.5 0.5 1 1 2 80.667 74.702 3;4 2.9089E-09 96403 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 102.47 93.06 114220000 114220000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26920 932 24574 226605;226606 180240;180241;180242 180242 2 KSDMEWTSSSK Unmodified 1284.5656 0.56561652 2411 Q14527 HLTF Helicase-like transcription factor yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 1 2 2 2 2 2 2 2 2 2 21.287 21.501 2;3 0.025521 22431 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 23.143 17.73 252410000 0 0 0 17479000 12608000 7148900 19937000 22818000 8979700 21305000 27295000 32740000 24194000 23597000 34305000 26921 2411 24575 226607;226608;226609;226610;226611;226612;226613;226614;226615;226616;226617;226618;226619;226620;226621;226622;226623;226624;226625;226626;226627;226628;226629 180243;180244 180243 1 KSDPVVSYRETVSEESNVLCLSK Unmodified 2625.2956 0.29559626 980 P13639 EEF2 Elongation factor 2 yes yes 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 78.497 73.086 4 0.014318 94100 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 25.257 17.635 211400000 206490000 0 4908100 0 0 0 0 0 0 0 0 0 0 0 0 26922 980 24576 226630;226631 180245;180246 180245 2 KSDQALNCGGTASTGSAGNVK Unmodified 2021.9436 0.94363069 139 O00287 RFXAP Regulatory factor X-associated protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 20.182 20.467 3 7.1977E-54 20744 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 88.071 80.423 139700000 0 0 0 0 16999000 0 15955000 9980800 0 0 25934000 31476000 14986000 12684000 11685000 26923 139 24577 226632;226633;226634;226635;226636;226637;226638;226639 180247;180248;180249;180250;180251;180252;180253 180248 7 KSDSNPLTEILK Unmodified 1343.7296 0.72964538 3874 Q96I25 RBM17 Splicing factor 45 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS 8.75 2.8 1 1 10 1 1 1 1 1 1 1 1 1 1 1 1 75.348 74.905 2;3 0.006599 92809 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 84.658 31.869 56253000 0 3977200 4051000 2234400 2506800 0 3235000 4336800 0 5298100 6382200 5329400 6121800 6081600 6699100 26924 3874 24578 226640;226641;226642;226643;226644;226645;226646;226647;226648;226649;226650;226651 180254;180255;180256 180255 1 KSDSSGQEYSL Unmodified 1199.5306 0.53061123 5225 Q9Y597 KCTD3 BTB/POZ domain-containing protein KCTD3 yes yes 0 0 1 By MS/MS 2 0 1 1 34.653 29.897 2 0.01678 39172 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.16 66.37 18845000 0 18845000 0 0 0 0 0 0 0 0 0 0 0 0 0 26925 5225 24579 226652 180257 180257 1 KSDVEAIFSK Unmodified 1122.5921 0.59208927 851 P07910;P0DMR1;O60812;B7ZW38;B2RXH8 HNRNPC;HNRNPCL4;HNRNPCL1;HNRNPCL3;HNRNPCL2 Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 2 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 4 3.46 3 1 1 1 1 1 53.467 49.173 2 0.0062283 64978 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.39 39.484 644310000 93267000 192550000 248440000 0 0 0 0 0 0 0 0 0 0 0 110060000 26926 851 24580 226653;226654;226655;226656 180258;180259;180260 180258 2 KSDVETIFSK Unmodified 1152.6027 0.60265396 4972 Q9UKM9 RALY RNA-binding protein Raly yes yes 0 0 1 By MS/MS 3 0 1 1 51.638 46.742 3 0.025092 57952 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 45.661 31.363 2895600 0 2895600 0 0 0 0 0 0 0 0 0 0 0 0 0 26927 4972 24581 226657 180261 180261 1 KSEAAVPPWVDTNDEETIQQQILALSADK Unmodified 3195.5936 0.59355242 3732 Q96A49 SYAP1 Synapse-associated protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 96.777 91.473 3 7.023E-08 115270 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.537 38.394 45874000 34095000 0 11779000 0 0 0 0 0 0 0 0 0 0 0 0 26928 3732 24582 226658;226659 180262;180263;180264;180265 180262 4 KSEAPAEVTHFSPK Unmodified 1526.7729 0.77290718 2953 Q6PID6 TTC33 Tetratricopeptide repeat protein 33 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 36.19 34.992 3 1.9782E-20 49497 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 126.69 126.69 264000000 166400000 17205000 32400000 2672000 0 0 4439300 4278400 0 5394800 8908500 7416500 4316200 0 10566000 26929 2953 24583 226660;226661;226662;226663;226664;226665;226666;226667;226668;226669;226670 180266;180267;180268;180269;180270 180267 5 KSEEEIDFLR Unmodified 1264.6299 0.62993134 5084 Q9Y262 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 0 0 1 By MS/MS By matching By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 57.38 57.49 3 0.0019623 64079 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.784 37.553 132160000 0 0 0 4648500 7395700 21196000 0 0 0 11925000 17686000 17743000 14055000 17696000 19814000 26930 5084 24584 226671;226672;226673;226674;226675;226676;226677;226678;226679 180271;180272;180273;180274 180271 4 KSEEEIDFLRSNPK Unmodified 1690.8526 0.85261407 5084 Q9Y262 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 58.237 52.178 3 5.119E-11 71379 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.74 71.714 47709000 22358000 0 25351000 0 0 0 0 0 0 0 0 0 0 0 0 26931 5084 24585 226680;226681 180275;180276 180275 0 KSEIQTLK Unmodified 945.5495 0.54949617 2401 Q14258 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 19.573 15.932 2 0.015105 20269 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 131.62 47.048 63266000 34041000 7659000 21566000 0 0 0 0 0 0 0 0 0 0 0 0 26932 2401 24586 226682;226683;226684 180277 180277 0 KSELLPAGWNNNK Unmodified 1469.7627 0.76267685 3614 Q92530 PSMF1 Proteasome inhibitor PI31 subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 53.735 53.032 3 0.0013798 75676 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.463 34.244 70531000 14324000 0 0 0 2296300 0 5062900 3318800 0 7849000 7942400 6165800 5350200 0 18221000 26933 3614 24587 226685;226686;226687;226688;226689;226690;226691;226692;226693 180278;180279;180280;180281 180280 2 KSEQLHNVTAFQGK Unmodified 1585.8213 0.82125436 3893 Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 29.913 30.131 3 0.04339 31075 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 23.055 14.74 42809000 0 0 0 5324500 0 0 6764000 5477000 0 4198200 5357000 0 0 7846100 7842300 26934 3893 24588 226694;226695;226696;226697;226698;226699;226700 180282 180282 1 KSLEDLLSEK Unmodified 1160.6289 0.62886871 4992 Q9ULD2 MTUS1 Microtubule-associated tumor suppressor 1 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 29.022 29.342 3 0.028616 31216 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 32.329 0.73247 36658000 0 0 0 0 0 0 0 0 0 9278800 5925200 0 17638000 3816500 0 26935 4992 24589 226701;226702;226703;226704 180283 180283 1 KSPDSDVAATLK Unmodified 1230.6456 0.6455814 437 O60841 EIF5B Eukaryotic translation initiation factor 5B yes yes 0 0 1 By MS/MS 3 0 1 1 34.55 30.007 3 0.046625 37529 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 27.33 12.186 2934100 0 2934100 0 0 0 0 0 0 0 0 0 0 0 0 0 26936 437 24590 226705 180284 180284 0 KSPLSWIEEK Unmodified 1215.6499 0.6499385 1708 P53004 BLVRA Biliverdin reductase A yes yes 0 0 1 By MS/MS 2 0 1 1 79.225 71.094 2 0.039311 93237 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.862 55.653 20757000 20757000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26937 1708 24591 226706 180285 180285 1 KSPNELVDDLFK Unmodified 1403.7296 0.72964538 5046 Q9UNZ2 NSFL1C NSFL1 cofactor p47 yes yes 0 0 1 By MS/MS 2 0 1 1 86.509 78.379 3 0.0095152 102256 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.712 35.081 3453500 3453500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26938 5046 24592 226707 180286 180286 1 KTDAPQPDVKEEEEEK Unmodified 1870.8796 0.87961668 1227 P27824 CANX Calnexin yes yes 0 0 2 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 19.943 20.108 3 0.018335 20552 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 60.209 52.801 40174000 0 0 0 1724200 2975100 5192700 2280100 2985000 4079900 4901700 4611400 3976100 3947000 3500500 0 26939 1227 24593 226708;226709;226710;226711;226712;226713;226714;226715;226716;226717;226718 180287;180288;180289;180290;180291 180288 4 KTDEIVALK Unmodified 1015.5914 0.59136099 1118;5069 P21127;Q9UQ88 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A no no 0 0 1 By MS/MS 3 0 1 1 40.738 36.037 2 0.024973 45022 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 96.331 25.412 9142700 0 9142700 0 0 0 0 0 0 0 0 0 0 0 0 0 26940 1118;5069 24594 226719 180292 180292 0 KTDESLTK Unmodified 920.48148 0.48147619 4517 Q9HCK8 CHD8 Chromodomain-helicase-DNA-binding protein 8 yes yes 0 0 1 By MS/MS 3 0 1 1 6.5812 3.22 2 0.0088309 4658 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 123.35 42.059 17136000 0 17136000 0 0 0 0 0 0 0 0 0 0 0 0 0 26941 4517 24595 226720 180293 180293 1 KTDIAAFVK Unmodified 991.57023 0.57023162 1505 P46734 MAP2K3 Dual specificity mitogen-activated protein kinase kinase 3 yes yes 0 0 1 By MS/MS 2 0 1 1 58.469 50.264 2 0.011093 68277 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 103.55 27.447 66935000 66935000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26942 1505 24596 226721 180294 180294 0 KTDPSSLGATSASFNFGK Unmodified 1813.8846 0.88464248 4978 Q9UKX7 NUP50 Nuclear pore complex protein Nup50 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.12 3 13 2 1 1 2 1 1 2 1 1 2 2 65.777 64.603 2;3 3.2097E-05 73177 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.264 82.996 230190000 67364000 0 3642700 8310900 13003000 0 3622600 0 0 24200000 26161000 21793000 4249100 17785000 40061000 26943 4978 24597 226722;226723;226724;226725;226726;226727;226728;226729;226730;226731;226732;226733;226734;226735;226736;226737 180295;180296;180297;180298;180299;180300;180301;180302 180297 7 KTEAPAAPAAQETK Unmodified 1411.7307 0.73070802 1993 P80723 BASP1 Brain acid soluble protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.23 3.29 6 1 24 3 2 2 2 2 2 2 2 2 2 2 2 2 2 2 15.521 14.84 2;3 7.5016E-29 19079 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.82 89.379 4049300000 170120000 1140200000 16114000 152940000 110800000 100430000 141580000 121060000 93200000 196810000 374160000 365800000 228920000 290000000 547140000 26944 1993 24598 226738;226739;226740;226741;226742;226743;226744;226745;226746;226747;226748;226749;226750;226751;226752;226753;226754;226755;226756;226757;226758;226759;226760;226761;226762;226763;226764;226765;226766;226767;226768 180303;180304;180305;180306;180307;180308;180309;180310;180311;180312;180313;180314;180315;180316;180317;180318;180319;180320;180321;180322;180323 180305 9 KTEEERPQETTNQHSTK Unmodified 2041.9665 0.96647463 602 O94913 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 5.7075 5.5788 4 5.5892E-36 2620 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 122.01 108.78 126620000 0 0 18465000 10524000 0 0 11452000 0 10227000 14725000 9906700 16601000 20284000 14435000 0 26945 602 24599 226769;226770;226771;226772;226773;226774;226775;226776;226777 180324;180325;180326;180327;180328;180329 180327 6 KTEFLDLDNSPLSPPSPR Unmodified 2012.0215 0.021470309 3409 Q8NCF5 NFATC2IP NFATC2-interacting protein yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 80.383 80.487 3 0.0010136 92663 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.878 34.328 49252000 0 0 0 0 1760600 4588200 1284500 4226000 3504600 5984100 4937200 4721400 2656900 2938400 12650000 26946 3409 24600 226778;226779;226780;226781;226782;226783;226784;226785;226786;226787;226788 180330;180331;180332;180333;180334;180335 180332 5 KTEINVEGVAK Unmodified 1186.6558 0.65575216 2708 Q53SF7 COBLL1 Cordon-bleu protein-like 1 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 38.758 33.937 3 0.0067349 42114 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 51.286 30.498 16704000 0 16704000 0 0 0 0 0 0 0 0 0 0 0 0 0 26947 2708 24601 226789;226790 180336;180337 180337 0 KTESASVQGRNTDVAQSPEAPK Unmodified 2299.1404 0.14041625 4817 Q9P2E9 RRBP1 Ribosome-binding protein 1 yes yes 0 0 2 By MS/MS 2 0 1 1 27.883 24.777 4 0.0002006 31493 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 61.181 52.701 8343200 0 0 8343200 0 0 0 0 0 0 0 0 0 0 0 0 26948 4817 24602 226791 180338 180338 1 KTESAVSQMQSVIELGR Oxidation (M) 1877.9517 0.95167618 1441 P41252 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 0 1 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 51.333 51.431 3 6.698E-05 57933 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 63.918 53.45 30602000 0 0 0 0 0 14959000 8857800 0 6785600 0 0 0 0 0 0 26949 1441 24603 226792;226793;226794;226795;226796;226797 180339;180340;180341;180342;180343;180344;180345 180339 2269 7 KTESAVSQMQSVIELGR Unmodified 1861.9568 0.95676156 1441 P41252 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 76.924 77.076 3 7.9316E-07 88449 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.332 70.513 68916000 0 0 0 0 0 4456400 2057900 3238100 3360500 5189400 5800400 7936900 2245600 4087600 30543000 26950 1441 24603 226798;226799;226800;226801;226802;226803;226804;226805;226806;226807 180346;180347;180348;180349;180350;180351;180352;180353;180354 180348 9 KTETAAHSLPQQTK Unmodified 1538.8053 0.80526994 2698 Q53EZ4 CEP55 Centrosomal protein of 55 kDa yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 4 12 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 12.132 11.483 3;4 1.1766E-09 17160 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.45 88.355 261790000 103990000 10718000 66312000 3361300 4724200 3665300 5848800 5853000 2807900 8147200 8171500 11059000 10121000 6165400 10848000 26951 2698 24604 226808;226809;226810;226811;226812;226813;226814;226815;226816;226817;226818;226819;226820;226821;226822;226823 180355;180356;180357;180358;180359;180360;180361;180362;180363;180364;180365;180366 180359 11 KTETMNVVMETNK Unmodified 1523.7324 0.73236428 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 38.946 37.803 3 1.0278E-18 48300 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 109 96.366 198590000 15081000 32550000 12240000 5618700 4189900 9597800 7700200 8160400 4925400 12945000 15802000 14706000 14453000 10670000 29953000 26952 965 24605 226824;226825;226826;226827;226828;226829;226830;226831;226832;226833;226834;226835;226836;226837;226838;226839 180367;180368;180369;180370;180371;180372;180373;180374;180375;180376;180377;180378 180376 9 KTETMNVVMETNK Oxidation (M) 1539.7273 0.7272789 965 P12270 TPR Nucleoprotein TPR yes yes 0 1 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 25.003 24.053 3 0.0001164 33092 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 94.122 78.181 92414000 0 27685000 8597200 0 0 0 0 0 10941000 0 12912000 20017000 0 0 12262000 26953 965 24605 226840;226841;226842;226843;226844;226845 180379;180380;180381;180382;180383;180384 180383 1266;1267 6 KTETMNVVMETNK 2 Oxidation (M) 1555.7222 0.72219352 965 P12270 TPR Nucleoprotein TPR yes yes 0 2 1 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 13.576 13.794 2 0.0025618 12860 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.741 38.217 20942000 0 0 0 0 1456800 0 1565900 0 1508600 2525400 2150100 3465800 3472000 2305800 2491900 26954 965 24605 226846;226847;226848;226849;226850;226851;226852;226853;226854 180385 180385 1266;1267 1 KTETVQEACER Unmodified 1349.6245 0.62452839 138 O00273 DFFA DNA fragmentation factor subunit alpha yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 9.0136 9.2536 3 0.01307 7073 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.175 40.921 13483000 0 0 0 0 0 0 0 0 612450 809830 0 4818700 0 1859100 5382800 26955 138 24606 226855;226856;226857;226858;226859 180386;180387 180386 1 KTGNFQVTELGR Unmodified 1348.7099 0.709913 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.023 46.14 3 0.001528 51845 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 44.426 27.484 74634000 0 0 0 7215600 5972400 3563300 7575600 6262300 3827200 6698800 8984800 10340000 8692600 5500700 0 26956 528 24607 226860;226861;226862;226863;226864;226865;226866;226867;226868;226869;226870;226871 180388;180389;180390;180391;180392;180393;180394;180395;180396;180397 180388 10 KTNPEIQSTLR Unmodified 1285.699 0.69901396 1310 P31944 CASP14 Caspase-14;Caspase-14 subunit p17, mature form;Caspase-14 subunit p10, mature form;Caspase-14 subunit p20, intermediate form;Caspase-14 subunit p8, intermediate form yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 27.187 27.399 3 0.0029744 29620 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 64.266 39.576 68856000 0 0 0 23608000 4813500 0 5244600 9617400 0 2805500 6740600 7419500 3314200 0 5292600 26957 1310 24608 226872;226873;226874;226875;226876;226877;226878;226879;226880 180398;180399;180400;180401 180401 3 KTNPEIQSTLRK Unmodified 1413.794 0.79397698 1310 P31944 CASP14 Caspase-14;Caspase-14 subunit p17, mature form;Caspase-14 subunit p10, mature form;Caspase-14 subunit p20, intermediate form;Caspase-14 subunit p8, intermediate form yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 20.102 20.23 3 2.2811E-05 20970 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 114.02 95.923 119160000 0 0 0 41701000 6448200 3918300 9402400 14575000 4602400 8344800 0 19067000 6832100 4268400 0 26958 1310 24609 226881;226882;226883;226884;226885;226886;226887;226888;226889;226890 180402;180403;180404 180404 0 KTPELGIVPPPPIPRPAK Unmodified 1906.1404 0.14040365 3516 Q8TEH3 DENND1A DENN domain-containing protein 1A yes yes 0 0 2 By MS/MS By matching By matching 10 0 3 1 1 1 74.659 74.82 4 0.021808 86269 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 32.746 29.305 12637000 0 0 0 0 0 0 0 0 0 0 0 6090100 4024900 2521600 0 26959 3516 24610 226891;226892;226893 180405 180405 0 KTPEQLHMLK Unmodified 1223.6696 0.66962808 4979 Q9UKY1 ZHX1 Zinc fingers and homeoboxes protein 1 yes yes 0 0 1 By matching By matching By matching By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 30.552 30.899 3 0.013699 32781 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 36.318 24.155 40637000 0 0 0 0 0 0 6625100 0 3608500 1506400 0 11650000 9294600 0 7952000 26960 4979 24611 226894;226895;226896;226897;226898;226899 180406 180406 1 KTPLALAGSPTPK Unmodified 1279.75 0.7499869 690 O95785 WIZ Protein Wiz yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 43.636 43.723 3 0.0073969 49551 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 36.938 31.475 50442000 0 0 0 4586200 5865700 0 8974900 6055800 3942900 5205600 6747600 9063700 0 0 0 26961 690 24612 226900;226901;226902;226903;226904;226905;226906;226907 180407;180408 180408 2 KTPNPANQYQFDK Unmodified 1549.7525 0.75250609 2343 Q13769 THOC5 THO complex subunit 5 homolog yes yes 0 0 1 By MS/MS 2 0 1 1 42.752 36.017 3 0.0035651 49560 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.32 46.881 23852000 23852000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26962 2343 24613 226908 180409 180409 1 KTPPAPSPFDLPELK Unmodified 1635.8872 0.88720866 632 O95239 KIF4A Chromosome-associated kinesin KIF4A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS 7.33 3.77 3 6 1 1 1 1 1 1 1 1 1 81.67 80.078 2;3 0.00023802 102544 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.98 59.815 156630000 27855000 89780000 22291000 0 0 0 0 1529800 1405900 0 2670000 3031600 0 1612300 6453700 26963 632 24614 226909;226910;226911;226912;226913;226914;226915;226916;226917 180410;180411;180412;180413 180412 3 KTPTEAPADCR Unmodified 1244.5819 0.58193529 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 2 1 1 1 1 9.2482 9.4014 3 0.0022731 6243 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 44.543 36.411 37609000 0 0 0 3005100 2247500 2452000 2495400 0 0 2088000 8060900 4897700 3036200 3685300 5640700 26964 3119 24615 226918;226919;226920;226921;226922;226923;226924;226925;226926;226927;226928 180414;180415 180415 2 KTPTEAPADCRALIDK Unmodified 1784.9091 0.90908309 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 2 By MS/MS 2 0 1 1 41.047 37.437 3 0.0029559 47186 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 80.609 63.208 26620000 0 0 26620000 0 0 0 0 0 0 0 0 0 0 0 0 26965 3119 24616 226929 180416 180416 1 KTQETLSQAGQK Unmodified 1317.6888 0.6888432 325 O43399 TPD52L2 Tumor protein D54 yes yes 0 0 1 By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 8.2308 8.405 2 0.037836 6928 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 68.893 48.023 12496000 0 0 0 0 625150 0 631420 0 0 753720 3014800 3382800 1458000 1319000 1311100 26966 325 24617 226930;226931;226932;226933;226934;226935;226936;226937 180417 180417 1 KTQNDVLHAENVK Unmodified 1494.7791 0.77905519 1345 P35241 RDX Radixin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 22.807 21.74 3 0.00059252 21441 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 61.423 49.49 58018000 17442000 0 15012000 0 0 0 0 0 0 0 5865800 8313700 0 3605200 7779000 26967 1345 24618 226938;226939;226940;226941;226942;226943 180418;180419;180420;180421;180422;180423 180423 6 KTSYAQHQQVR Unmodified 1344.6898 0.68984625 1842 P61247 RPS3A 40S ribosomal protein S3a yes yes 0 0 1 By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 6.1617 6.28 3 0.025497 4280 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 24.291 16.221 21898000 0 0 0 2618000 2375800 0 2688500 0 779590 1084500 2776500 4578300 2628900 0 2368400 26968 1842 24619 226944;226945;226946;226947;226948;226949;226950;226951;226952 180424;180425 180425 1 KVDAETVGR Unmodified 973.51926 0.51925868 936 P11172 UMPS Uridine 5'-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5'-phosphate decarboxylase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 10.606 10.747 2 0.028463 8475 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 103.8 56.737 89943000 0 0 0 5626000 4957300 12526000 7773200 5699100 0 8407400 3683600 9498300 8434700 10096000 13242000 26969 936 24620 226953;226954;226955;226956;226957;226958;226959;226960;226961;226962;226963 180426;180427;180428 180427 3 KVDAETVGRVK Unmodified 1200.6826 0.68263561 936 P11172 UMPS Uridine 5'-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5'-phosphate decarboxylase yes yes 0 0 2 By MS/MS By MS/MS 2 0 4 2 2 21.991 18.126 2;3 1.4293E-16 26165 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 203.03 178.75 1511800000 1461200000 0 50583000 0 0 0 0 0 0 0 0 0 0 0 0 26970 936 24621 226964;226965;226966;226967 180429;180430;180431;180432;180433 180429 3 KVDAGGK Unmodified 673.37589 0.3758889 2083 Q02878 RPL6 60S ribosomal protein L6 yes yes 0 0 1 By MS/MS 2 0 1 1 19.123 16.524 1 0.044867 21071 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 41.502 16.504 8354300 0 0 8354300 0 0 0 0 0 0 0 0 0 0 0 0 26971 2083 24622 226968 180434 180434 0 KVDEEAEAK Unmodified 1017.4979 0.49785453 2654 Q2NL82 TSR1 Pre-rRNA-processing protein TSR1 homolog yes yes 0 0 1 By MS/MS By MS/MS 2.75 0.433 1 3 1 3 6.0369 2.64 2 1.9147E-22 4721 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 201.18 129.88 190610000 323650 190290000 0 0 0 0 0 0 0 0 0 0 0 0 0 26972 2654 24623 226969;226970;226971;226972 180435;180436;180437 180435 3 KVDFQDTNAR Unmodified 1192.5836 0.58364985 2660 Q2YD98 UVSSA UV-stimulated scaffold protein A yes yes 0 0 1 By MS/MS By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 19.897 20.132 3 0.021972 20387 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 26.75 10.552 34878000 0 0 0 3421900 3424100 3102500 0 0 0 5207200 4554100 6161800 2470500 2271000 4265000 26973 2660 24624 226973;226974;226975;226976;226977;226978;226979;226980;226981 180438 180438 1 KVDGSVNAYAINVSQK Unmodified 1691.8842 0.88424855 3562 Q8WVK2 SNRNP27 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 48.967 49.11 3 6.3237E-20 55217 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 108.14 96.765 248490000 0 0 0 12948000 20605000 0 27834000 20114000 26910000 28426000 34135000 37410000 0 0 40113000 26974 3562 24625 226982;226983;226984;226985;226986;226987;226988;226989;226990 180439;180440;180441;180442;180443;180444;180445 180442 6 KVDKIEELDQENEAALENGIK Unmodified 2384.2071 0.20709883 1473 P43243 MATR3 Matrin-3 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 2 1 1 1 1 1 1 1 67.058 66.475 3;4 2.1737E-10 75815 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 79.942 71.755 105310000 0 0 19884000 0 0 0 0 8169900 5307400 9766900 9001400 14681000 9695800 0 28806000 26975 1473 24626 226991;226992;226993;226994;226995;226996;226997;226998;226999 180446;180447;180448;180449;180450;180451;180452;180453 180453 7 KVDQPPEAK Unmodified 1010.5397 0.53965977 3633 Q92598 HSPH1 Heat shock protein 105 kDa yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 9.1445 5.9897 2 7.1172E-16 7821 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 197.96 137.89 902350000 68326000 823470000 10559000 0 0 0 0 0 0 0 0 0 0 0 0 26976 3633 24627 227000;227001;227002;227003 180454;180455;180456;180457;180458 180456 5 KVDRIENNPR Unmodified 1239.6684 0.66838253 488 O75376 NCOR1 Nuclear receptor corepressor 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 7.3345 7.4138 3 0.027877 5738 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 66.595 19.89 69119000 0 0 0 5632900 0 5906500 8129100 8697100 10071000 0 0 17100000 13583000 0 0 26977 488 24628 227004;227005;227006;227007;227008;227009;227010 180459 180459 1 KVDWLTEK Unmodified 1017.5495 0.54949617 1816;1400;2396 P38919;P60842;Q14240 EIF4A3;EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed;Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 41.706 42.025 2 0.017517 47101 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 118.5 61.318 160390000 0 0 0 0 0 18040000 12723000 13216000 7653200 26172000 23459000 20751000 13338000 0 25039000 26978 1400;1816;2396 24629 227011;227012;227013;227014;227015;227016;227017;227018;227019 180460 180460 0 KVEAPETNIDK Unmodified 1242.6456 0.6455814 464 O75152 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 23.823 23.682 2;3 0.003336 23984 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 86.344 38.77 140950000 0 12699000 0 6526400 8023600 7614000 8198900 9058100 5050900 13149000 10676000 15763000 18709000 9237200 16240000 26979 464 24630 227020;227021;227022;227023;227024;227025;227026;227027;227028;227029;227030;227031;227032 180461;180462;180463;180464;180465;180466;180467;180468;180469;180470 180469 5 KVEAQLQELQVK Unmodified 1411.8035 0.80347903 1356 P35579 MYH9 Myosin-9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.28 3.23 6 2 28 2 4 2 3 3 3 2 2 2 2 2 2 3 2 2 52.339 51.117 2;3 3.8449E-80 57007 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 228.83 174.86 7748000000 50429000 459000000 255580000 417690000 463370000 548040000 477020000 423710000 421290000 641710000 745920000 1019500000 630360000 451410000 742990000 26980 1356 24631 227033;227034;227035;227036;227037;227038;227039;227040;227041;227042;227043;227044;227045;227046;227047;227048;227049;227050;227051;227052;227053;227054;227055;227056;227057;227058;227059;227060;227061;227062;227063;227064;227065;227066;227067;227068 180471;180472;180473;180474;180475;180476;180477;180478;180479;180480;180481;180482;180483;180484;180485;180486;180487;180488;180489;180490;180491;180492;180493;180494;180495;180496;180497;180498;180499;180500;180501;180502;180503;180504;180505;180506;180507;180508;180509;180510;180511;180512;180513;180514;180515;180516;180517;180518;180519;180520;180521;180522;180523;180524;180525;180526;180527;180528;180529;180530;180531;180532;180533;180534;180535;180536;180537;180538;180539;180540;180541;180542;180543;180544;180545 180471 74 KVEDMMK Oxidation (M) 895.41432 0.4143246 980 P13639 EEF2 Elongation factor 2 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 6 2 2 4 2 10.161 6.8663 2 0.037201 5752 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 98.523 21.465 4668200000 219800000 4262600000 185810000 0 0 0 0 0 0 0 0 0 0 0 0 26981 980 24632 227069;227070;227071;227072;227073;227074;227075;227076 180546;180547;180548;180549;180550 180548 1311;1312 0 KVEDMMK 2 Oxidation (M) 911.40924 0.40923922 980 P13639 EEF2 Elongation factor 2 yes yes 0 2 1 By MS/MS By MS/MS By MS/MS 2.2 0.4 12 3 4 7 4 4.4544 1.4129 2 0.017738 3518 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 94.806 34.329 456580000 2305400 428600000 25674000 0 0 0 0 0 0 0 0 0 0 0 0 26982 980 24632 227077;227078;227079;227080;227081;227082;227083;227084;227085;227086;227087;227088;227089;227090;227091 180551;180552;180553;180554;180555;180556;180557;180558 180557 1311;1312 4 KVEDMMK Unmodified 879.41941 0.41940998 980 P13639 EEF2 Elongation factor 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 19.184 16.097 2 0.044128 20078 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 122.18 32.88 2685600000 0 2406000000 279590000 0 0 0 0 0 0 0 0 0 0 0 0 26983 980 24632 227092;227093 180559 180559 0 KVEEAEPEEFVVEK Unmodified 1660.8196 0.8195826 2249 Q13185 CBX3 Chromobox protein homolog 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.74 3.52 7 3 24 4 4 2 2 2 2 2 2 2 2 2 2 2 2 2 54.621 53.228 2;3 5.2015E-45 72569 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 196.11 155.52 2116900000 394660000 400620000 58522000 64425000 56107000 102260000 75106000 61896000 57292000 98982000 145180000 176460000 103640000 107660000 214070000 26984 2249 24633 227094;227095;227096;227097;227098;227099;227100;227101;227102;227103;227104;227105;227106;227107;227108;227109;227110;227111;227112;227113;227114;227115;227116;227117;227118;227119;227120;227121;227122;227123;227124;227125;227126;227127 180560;180561;180562;180563;180564;180565;180566;180567;180568;180569;180570;180571;180572;180573;180574;180575;180576;180577;180578;180579;180580;180581;180582;180583;180584;180585;180586;180587;180588;180589;180590 180579 29 KVEEDLK Unmodified 859.4651 0.46509784 1625 P50502;Q8NFI4 ST13;ST13P5 Hsc70-interacting protein;Putative protein FAM10A5 yes no 0 0 1 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 2 3 1 11.02 7.6819 1;2 0.006076 10355 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.83 17.039 3123900000 285500000 2766900000 71522000 0 0 0 0 0 0 0 0 0 0 0 0 26985 1625 24634 227128;227129;227130;227131;227132;227133 180591;180592;180593;180594 180592 0 KVEEEDEEEEEEEEEEEEEEDE Unmodified 2797.9945 0.99450342 274 O15347 HMGB3 High mobility group protein B3 yes yes 0 0 1 By MS/MS By MS/MS 1 0 2 1 1 106.16 109.24 3 0.00014946 99180 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 62.303 61.772 36057000 17398000 18659000 0 0 0 0 0 0 0 0 0 0 0 0 0 26986 274 24635 227134;227135 180595;180596 180596 1 KVEELEGEITTLNHK Unmodified 1738.9101 0.91012895 2181 Q10589 BST2 Bone marrow stromal antigen 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 55.959 55.203 3 0.00021963 70296 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 71.279 66.811 186770000 6674100 0 10686000 0 6407500 18583000 16188000 16310000 18923000 12509000 13834000 22999000 14051000 13501000 16105000 26987 2181 24636 227136;227137;227138;227139;227140;227141;227142;227143;227144;227145;227146;227147;227148 180597;180598;180599;180600 180599 3 KVEELNSEIEK Unmodified 1316.6824 0.68236084 3992 Q96SN8 CDK5RAP2 CDK5 regulatory subunit-associated protein 2 yes yes 0 0 1 By MS/MS 3 0 1 1 35.284 30.742 3 0.013952 38473 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 37.327 17.669 3008500 0 3008500 0 0 0 0 0 0 0 0 0 0 0 0 0 26988 3992 24637 227149 180601 180601 1 KVEEVLEEEEEEYVVEK Unmodified 2108.0049 0.004876771 2009 P83916 CBX1 Chromobox protein homolog 1 yes yes 0 0 1 By MS/MS 2 0 1 1 78.353 70.222 3 2.02E-72 92538 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 174.59 164.45 195840000 195840000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26989 2009 24638 227150 180602 180602 1 KVEGFDLVQK Unmodified 1161.6394 0.63937381 4020 Q99541 PLIN2 Perilipin-2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.6 1.74 1 19 1 2 2 2 2 2 1 2 1 2 1 2 50.191 50.112 2;3 0.014893 64243 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 106.42 73.583 194300000 0 0 11448000 14247000 15490000 14740000 14144000 17420000 0 9694800 21441000 16275000 21999000 12837000 24564000 26990 4020 24639 227151;227152;227153;227154;227155;227156;227157;227158;227159;227160;227161;227162;227163;227164;227165;227166;227167;227168;227169;227170 180603;180604;180605;180606;180607;180608;180609 180605 6 KVEHEISEGNVATAAAAALASAATK Unmodified 2409.25 0.24996669 3687 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 yes yes 0 0 1 By MS/MS 2 0 2 2 88.918 80.787 3;4 3.19E-12 104974 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.529 67.537 55857000 55857000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26991 3687 24640 227171;227172 180610;180611;180612 180612 3 KVEIIIGRTDEAVECTEDELNNLGHPDNK Unmodified 3307.599 0.5990485 4869 Q9UDY8 MALT1 Mucosa-associated lymphoid tissue lymphoma translocation protein 1 yes yes 0 0 2 By MS/MS 2 0 1 1 88.602 80.472 4 0.027487 104726 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 18.689 10.615 7359900 7359900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26992 4869 24641 227173 180613 180613 1 KVEILENEIVQEK Unmodified 1569.8614 0.86138784 2676 Q3V6T2 CCDC88A Girdin yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 68.835 62.826 3 0.0088714 77429 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 47.189 24.304 6030400 2705600 0 3324800 0 0 0 0 0 0 0 0 0 0 0 0 26993 2676 24642 227174;227175 180614;180615 180615 2 KVENTRWDYLTQVEK Unmodified 1907.9741 0.97412619 4497 Q9HB71 CACYBP Calcyclin-binding protein yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 62.101 61.317 3 3.2083E-19 68509 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 114.69 92.86 84213000 16839000 0 0 0 0 6909400 0 2971000 2084900 3042200 4552500 7320800 0 0 40493000 26994 4497 24643 227176;227177;227178;227179;227180;227181;227182;227183 180616;180617;180618 180616 3 KVERQTELK Unmodified 1129.6455 0.64552182 958 P11940;Q9H361 PABPC1;PABPC3 Polyadenylate-binding protein 1;Polyadenylate-binding protein 3 yes no 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 7.7802 4.8473 2 1.597E-05 8428 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 162.31 85.54 641840000 632390000 0 9447100 0 0 0 0 0 0 0 0 0 0 0 0 26995 958 24644 227184;227185 180619 180619 1 KVESLQEEIAFLK Unmodified 1532.845 0.84500949 870 P08670 VIM Vimentin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 80.037 80.095 2;3 4.8626E-07 92783 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 121.02 87.933 184940000 0 0 0 4675300 5431800 6742400 9194300 19845000 11412000 18206000 14681000 20258000 8299300 9088900 57111000 26996 870 24645 227186;227187;227188;227189;227190;227191;227192;227193;227194;227195;227196;227197;227198;227199;227200;227201;227202;227203;227204;227205;227206;227207;227208;227209 180620;180621;180622;180623;180624;180625;180626;180627;180628;180629;180630;180631;180632;180633;180634;180635;180636;180637;180638;180639;180640;180641 180637 17 KVESTGAVPEFK Unmodified 1290.682 0.68196691 2997 Q6YN16 HSDL2 Hydroxysteroid dehydrogenase-like protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.25 2.26 1 1 18 2 1 2 2 2 2 2 2 2 1 2 39.19 38.941 2;3 0.011117 43336 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 68.536 48.206 87150000 0 17283000 0 2009300 0 6616300 6627600 0 5920900 8000000 10128000 9516200 8543600 4701900 7802600 26997 2997 24646 227210;227211;227212;227213;227214;227215;227216;227217;227218;227219;227220;227221;227222;227223;227224;227225;227226;227227;227228;227229 180642;180643;180644 180642 2 KVESTGAVPEFKEEK Unmodified 1676.8621 0.86211612 2997 Q6YN16 HSDL2 Hydroxysteroid dehydrogenase-like protein 2 yes yes 0 0 2 By MS/MS 2 0 1 1 39.012 35.463 3 0.034103 44848 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 44.252 30.573 8280800 0 0 8280800 0 0 0 0 0 0 0 0 0 0 0 0 26998 2997 24647 227230 180645 180645 0 KVEVAVK Unmodified 771.48544 0.48543935 3159 Q86V21 AACS Acetoacetyl-CoA synthetase yes yes 0 0 1 By MS/MS 3 0 1 1 16.403 12.811 2 0.018851 16239 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 132.57 45.701 45089000 0 45089000 0 0 0 0 0 0 0 0 0 0 0 0 0 26999 3159 24648 227231 180646 180646 0 KVFIQHITLSDEER Unmodified 1713.905 0.90498399 2411 Q14527 HLTF Helicase-like transcription factor yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 22.303 22.348 3 0.0064095 23226 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 24.415 0 18390000 0 0 0 0 0 4895500 2633000 0 0 10862000 0 0 0 0 0 27000 2411 24649 227232;227233;227234 180647;180648;180649 180648 3 KVGDDIAK Unmodified 844.46543 0.46543219 1266 P30050 RPL12 60S ribosomal protein L12 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 11.718 8.5018 2 0.016732 11892 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107 37.825 254370000 21575000 227010000 5775200 0 0 0 0 0 0 0 0 0 0 0 0 27001 1266 24650 227235;227236;227237;227238 180650;180651 180650 0 KVGLDPSQLPVGENGIV Unmodified 1720.9359 0.93594977 3860 Q96GX9 APIP Methylthioribulose-1-phosphate dehydratase yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 86.262 82.24 2 0.0017001 102327 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.345 59.912 59498000 0 59498000 0 0 0 0 0 0 0 0 0 0 0 0 0 27002 3860 24651 227239;227240 180652 180652 1 KVNQQPNTSDKK Unmodified 1385.7263 0.72629134 1741 P54578 USP14 Ubiquitin carboxyl-terminal hydrolase 14 yes yes 0 0 2 By MS/MS 2 0 1 1 5.5935 2.2161 3 0.0047079 5058 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.179 23.639 30153000 30153000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27003 1741 24652 227241 180653 180653 0 KVPLQEGPK Unmodified 994.58113 0.58113065 2113 Q05209 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19.372 18.646 2 0.0084224 27533 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 105.14 62.266 228080000 109230000 24636000 22702000 4454800 4866600 7238200 5533200 4793300 4289500 7752300 0 7754300 6675400 6303200 11857000 27004 2113 24653 227242;227243;227244;227245;227246;227247;227248;227249;227250;227251;227252;227253;227254;227255 180654;180655;180656 180655 0 KVPQVSTPTLVEVSR Unmodified 1638.9305 0.93047046 64;65 CON__P02769;CON__P02768-1;P02768 ALB Serum albumin no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 64.932 65.019 2;3 4.2297E-06 74361 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 79.346 66.514 + 3132800000 0 0 0 724750000 169210000 75607000 101680000 1186800000 69140000 180160000 172010000 168760000 118720000 73270000 92590000 27005 65;64 24654 227256;227257;227258;227259;227260;227261;227262;227263;227264;227265;227266;227267;227268;227269;227270;227271;227272;227273;227274;227275;227276;227277;227278;227279 180657;180658;180659;180660;180661;180662;180663;180664;180665;180666;180667;180668;180669;180670;180671;180672;180673 180661 12 KVPRLPATAAEPEAAVISNGEH Unmodified 2256.1862 0.18624423 2057 Q01581 HMGCS1 Hydroxymethylglutaryl-CoA synthase, cytoplasmic yes yes 0 0 2 By MS/MS 2 0 1 1 74.162 66.032 4 0.0069178 87282 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 25.935 21.068 12394000 12394000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27006 2057 24655 227280 180674;180675 180675 2 KVPSEASFSDVHLEEGESNSLTK Unmodified 2489.1922 0.19217704 3890 Q96JB2 COG3 Conserved oligomeric Golgi complex subunit 3 yes yes 0 0 1 By MS/MS 2 0 1 1 68.364 64.641 4 0.0055298 80244 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 32.956 30.154 5073200 0 0 5073200 0 0 0 0 0 0 0 0 0 0 0 0 27007 3890 24656 227281 180676 180676 1 KVPYLASSPSTSDGGTDSPGTASPSPTK Unmodified 2691.2875 0.28753399 5225 Q9Y597 KCTD3 BTB/POZ domain-containing protein KCTD3 yes yes 0 0 1 By MS/MS By matching By MS/MS 7.33 3.77 1 2 1 1 1 53.886 51.445 3 2.7846E-07 69099 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.262 46.492 16146000 6398400 0 0 0 0 0 0 0 0 0 0 0 0 4385300 5362400 27008 5225 24657 227282;227283;227284 180677;180678 180678 2 KVPYVDEEGNLVK Unmodified 1488.7824 0.78240924 2668 Q3KQV9 UAP1L1 UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 61.575 56.228 3 0.0017433 72666 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.004 55.651 53226000 0 53226000 0 0 0 0 0 0 0 0 0 0 0 0 0 27009 2668 24658 227285;227286 180679;180680 180679 2 KVQFGNENTK Unmodified 1163.5935 0.59348625 2786 Q5T8P6 RBM26 RNA-binding protein 26 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13.963 13.612 2;3 0.015276 12611 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 65.627 43.097 104340000 26429000 0 2772700 6809700 6541800 2703800 6999000 3979500 2864300 6898500 8000500 9554400 8101500 6380500 6303400 27010 2786 24659 227287;227288;227289;227290;227291;227292;227293;227294;227295;227296;227297;227298;227299;227300 180681;180682;180683;180684;180685 180684 2 KVQGGALEDSQLVAGVAFK Unmodified 1916.0367 0.036726442 4065 Q99832 CCT7 T-complex protein 1 subunit eta yes yes 0 0 1 By matching By MS/MS 2 0 2 1 1 81.472 77.835 3 9.7796E-05 94134 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 42.633 39.021 13806000 0 9696700 4108900 0 0 0 0 0 0 0 0 0 0 0 0 27011 4065 24660 227301;227302 180686 180686 1 KVQLTPGQTEVK Unmodified 1326.7507 0.75071518 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 1 By MS/MS 2 0 1 1 39.387 32.826 3 0.019723 45489 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.88 25.82 8778200 8778200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27012 2775 24661 227303 180687 180687 0 KVTAQDVRK Unmodified 1043.6087 0.60874239 1198 P26038 MSN Moesin yes yes 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 7.1415 4.2751 2 0.039559 7525 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 113.71 29.139 185490000 183250000 0 2238300 0 0 0 0 0 0 0 0 0 0 0 0 27013 1198 24662 227304;227305 180688 180688 0 KVTDPSVAK Unmodified 943.53385 0.53384611 405 O60502 MGEA5 Protein O-GlcNAcase yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 12.425 9.0794 2 0.0043537 11514 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 131.62 65.187 59245000 0 59245000 0 0 0 0 0 0 0 0 0 0 0 0 0 27014 405 24663 227306;227307 180689 180689 0 KVTEELLTDNR Unmodified 1316.6936 0.69359423 4895 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 37.645 37.771 3 0.0044816 41816 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 46.068 33.686 62326000 0 0 0 5074900 4470200 4779200 7275500 8424400 0 0 8749600 7494600 9829700 6227500 0 27015 4895 24664 227308;227309;227310;227311;227312;227313;227314;227315;227316 180690;180691;180692 180691 3 KVTHAVVTVPAYFNDAQR Unmodified 2015.0589 0.058858868 932 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 2 2 2 2 2 2 63.859 64.13 3;4 0.00061436 72290 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.082 42.11 141040000 0 0 0 0 0 0 4099000 10489000 0 13638000 0 31930000 10812000 12032000 58043000 27016 932 24665 227317;227318;227319;227320;227321;227322;227323;227324;227325;227326;227327;227328;227329 180693;180694;180695;180696;180697;180698;180699;180700;180701;180702 180693 7 KVTLGTQPTVLR Unmodified 1311.7874 0.78743503 2608 Q16531 DDB1 DNA damage-binding protein 1 yes yes 0 0 1 By MS/MS 10 0 1 1 47.968 48.699 3 0.0051648 53889 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.567 17.536 8212500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8212500 27017 2608 24666 227330 180703 180703 1 KVTQLDLDGPK Unmodified 1212.6714 0.67140222 2292 Q13442 PDAP1 28 kDa heat- and acid-stable phosphoprotein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.89 3.63 4 2 3 2 2 2 1 1 1 43.921 40.467 2;3 0.00013942 56742 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.156 83.006 169360000 57810000 42386000 43807000 0 0 0 0 0 0 0 0 7530100 0 5060600 12768000 27018 2292 24667 227331;227332;227333;227334;227335;227336;227337;227338;227339 180704;180705;180706;180707;180708;180709;180710;180711;180712;180713 180707 6 KVTQQDVKK Unmodified 1072.6241 0.6240581 1345 P35241 RDX Radixin yes yes 0 0 2 By MS/MS 2 0 1 1 5.7159 2.3384 2 5.486E-06 5211 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 179.81 44.807 289680000 289680000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27019 1345 24668 227340 180714 180714 1 KVVDYTTAK Unmodified 1023.5601 0.56006086 1911 P62820 RAB1A Ras-related protein Rab-1A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.969 15.14 2 0.042281 14254 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 81.547 52.398 97194000 0 0 0 7082000 4926400 2383000 9045300 4963700 3030700 7885500 14719000 16403000 9572500 8012000 9170700 27020 1911 24669 227341;227342;227343;227344;227345;227346;227347;227348;227349;227350;227351;227352 180715 180715 1 KWAGIMMETDEIR Oxidation (M) 1594.7483 0.74834869 5401 yes yes 0 1 1 By MS/MS 10 0 1 1 34.272 34.58 3 0.017427 37043 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 45.257 18.716 + 2086000 0 0 0 0 0 0 0 0 0 0 0 0 0 2086000 0 27021 5401 24670 227353 180716 180716 6771;6772 0 KWDLSELPK Unmodified 1114.6023 0.60226003 3670 Q92841 DDX17 Probable ATP-dependent RNA helicase DDX17 yes yes 0 0 1 By MS/MS 2 0 1 1 76.838 68.708 2 0.0039241 90566 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 140.16 84.488 46161000 46161000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27022 3670 24671 227354 180717 180717 1 KWEQQLQEEQEQK Unmodified 1729.8271 0.8271276 3573 Q8WWI1 LMO7 LIM domain only protein 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 1 2 2 1 2 2 2 1 1 2 33.512 33.801 2;3 1.0433E-18 36063 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 153.95 130.63 120410000 0 0 0 0 6216500 6216400 10070000 9004800 4291600 13318000 12372000 19596000 9735200 7849800 21737000 27023 3573 24672 227355;227356;227357;227358;227359;227360;227361;227362;227363;227364;227365;227366;227367;227368;227369;227370;227371 180718;180719;180720;180721;180722;180723;180724;180725;180726;180727;180728;180729 180721 12 KWNLDELPK Unmodified 1141.6132 0.61315906 1062 P17844 DDX5 Probable ATP-dependent RNA helicase DDX5 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 72.019 66.114 3 0.00029697 87669 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 125.82 89.26 75712000 72269000 0 3443100 0 0 0 0 0 0 0 0 0 0 0 0 27024 1062 24673 227372;227373 180730;180731 180730 1 KWQDEDGKK Unmodified 1132.5513 0.55128709 1402 P39023 RPL3 60S ribosomal protein L3 yes yes 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 6.4313 3.6065 2 0.027349 6466 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 102.62 65.063 14991000 11069000 0 3922500 0 0 0 0 0 0 0 0 0 0 0 0 27025 1402 24674 227374;227375 180732 180732 0 KWQNADLNGK Unmodified 1172.5938 0.5938206 1006 P14735 IDE Insulin-degrading enzyme yes yes 0 0 1 By MS/MS 2 0 2 2 28.546 23.027 2;3 0.00015272 32570 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 192.26 163.1 45128000 45128000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27026 1006 24675 227376;227377 180733;180734 180734 0 KWQVSREDQDK Unmodified 1417.695 0.69499121 4207 Q9BWD1 ACAT2 Acetyl-CoA acetyltransferase, cytosolic yes yes 0 0 2 By MS/MS 2 0 1 1 20.526 15.802 3 0.040593 22998 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.439 41.861 62475000 62475000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27027 4207 24676 227378 180735 180735 1 KYDAFLASESLIK Unmodified 1483.7922 0.79224564 1927 P62906 RPL10A 60S ribosomal protein L10a yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 6.56 3.9 6 1 9 3 2 2 1 1 1 1 1 1 1 1 1 79.291 77.035 2;3 1.0605E-92 99025 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 237.53 163.07 565520000 341780000 57495000 39633000 0 0 5439500 0 7426600 5351600 11676000 14202000 18398000 12011000 11046000 41065000 27028 1927 24677 227379;227380;227381;227382;227383;227384;227385;227386;227387;227388;227389;227390;227391;227392;227393;227394 180736;180737;180738;180739;180740;180741;180742;180743;180744;180745;180746 180741 6 KYDDDISPSEDK Unmodified 1410.6151 0.61506914 2143 Q07866 KLC1 Kinesin light chain 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 22.787 22.038 2;3 5.3426E-09 28337 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.42 103.33 154870000 8219100 53990000 0 5477500 3616000 8054000 8647800 5380100 4812600 9152600 7139300 10940000 10320000 6342200 12782000 27029 2143 24678 227395;227396;227397;227398;227399;227400;227401;227402;227403;227404;227405;227406;227407;227408;227409 180747;180748;180749;180750;180751 180747 5 KYDEAIK Unmodified 865.45453 0.45453316 4226;2895 Q6N069;Q9BXJ9 NAA16;NAA15 N-alpha-acetyltransferase 16, NatA auxiliary subunit;N-alpha-acetyltransferase 15, NatA auxiliary subunit no no 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 7.18 3.74 3 1 7 1 2 1 1 1 1 1 1 1 1 12.053 10.922 2 0.011472 13418 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 152.41 55.902 1007500000 51093000 467070000 31832000 5337800 7979600 6385700 0 45150000 67712000 0 0 321190000 0 0 3800500 27030 2895;4226 24679 227410;227411;227412;227413;227414;227415;227416;227417;227418;227419;227420 180752;180753;180754 180752 0 KYDIYFADGK Unmodified 1218.5921 0.59208927 3149 Q86UK7 ZNF598 Zinc finger protein 598 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 52.434 52.748 2 0.031282 59738 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 86.014 70.812 79769000 0 0 0 0 0 7955500 0 1499800 4482100 13104000 6472000 13751000 7705700 7032500 17767000 27031 3149 24680 227421;227422;227423;227424;227425;227426;227427;227428;227429 180755 180755 1 KYDYDSSSVRK Unmodified 1346.6466 0.64664404 4003 Q96TA1 FAM129B Niban-like protein 1 yes yes 0 0 2 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14.837 14.221 3 0.0038856 12952 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.352 80.497 526080000 389300000 5086300 23618000 3334100 2705600 14892000 4073700 3474000 0 15891000 14200000 12715000 9555900 7495900 19739000 27032 4003 24681 227430;227431;227432;227433;227434;227435;227436;227437;227438;227439;227440;227441;227442;227443 180756;180757;180758;180759;180760 180758 1 KYEDEINK Unmodified 1037.5029 0.50293991 79;960;2056;83;50 CON__ENSEMBL:ENSBTAP00000038253;CON__P35908v2;P35908;CON__P35908;CON__Q01546;P12035;CON__P12035;Q01546 KRT2;KRT3;KRT76 Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 3;Keratin, type II cytoskeletal 2 oral no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 13.531 12.818 2 2.4395E-178 12362 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 239.76 197.86 + 16663000000 49977000 1242000000 26532000 2147100000 783940000 1385300000 1001400000 1045000000 1022000000 1731600000 1200900000 1402000000 2076000000 869030000 680760000 27033 50;79;83;960;2056 24682 227444;227445;227446;227447;227448;227449;227450;227451;227452;227453;227454;227455;227456;227457;227458;227459 180761;180762;180763;180764;180765;180766;180767;180768;180769;180770;180771;180772;180773;180774 180774 10 KYEDEINKR Unmodified 1193.6041 0.60405094 79;960;2056;83;50 CON__ENSEMBL:ENSBTAP00000038253;CON__P35908v2;P35908;CON__P35908;CON__Q01546;P12035;CON__P12035;Q01546 KRT2;KRT3;KRT76 Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 3;Keratin, type II cytoskeletal 2 oral no no 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 30 3 2 3 2 3 3 3 2 2 2 3 2 12.763 12.899 2;3 3.3771E-10 10848 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 169.77 138.28 + 14648000000 0 0 0 1697100000 919840000 523150000 770210000 2087100000 795980000 814150000 663060000 4208500000 1423000000 543020000 203210000 27034 50;79;83;960;2056 24683 227460;227461;227462;227463;227464;227465;227466;227467;227468;227469;227470;227471;227472;227473;227474;227475;227476;227477;227478;227479;227480;227481;227482;227483;227484;227485;227486;227487;227488;227489 180775;180776;180777;180778;180779;180780;180781;180782;180783;180784;180785;180786;180787;180788;180789;180790;180791;180792;180793;180794 180785 6 KYEDICPSTHNMDVPNIK Oxidation (M) 2175.9929 0.99288907 1949 P63241;Q6IS14;Q9GZV4 EIF5A;EIF5AL1;EIF5A2 Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-1-like;Eukaryotic translation initiation factor 5A-2 yes no 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 5.51 3.95 1 19 2 17 6 6 10 1 2 2 1 2 1 1 2 2 1 2 52.34 50.56 3;4 1.7183E-145 52585 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 205.88 192.63 9881800000 777620000 1292900000 5592900000 31489000 67644000 152440000 63653000 87603000 40606000 113910000 433830000 333850000 74408000 0 818950000 27035 1949 24684 227490;227491;227492;227493;227494;227495;227496;227497;227498;227499;227500;227501;227502;227503;227504;227505;227506;227507;227508;227509;227510;227511;227512;227513;227514;227515;227516;227517;227518;227519;227520;227521;227522;227523;227524;227525;227526;227527;227528 180795;180796;180797;180798;180799;180800;180801;180802;180803;180804;180805;180806;180807;180808;180809;180810;180811;180812;180813;180814;180815;180816;180817;180818;180819;180820;180821;180822;180823;180824;180825;180826;180827 180802 3131 24 KYEDICPSTHNMDVPNIK Unmodified 2159.998 0.99797445 1949 P63241;Q6IS14;Q9GZV4 EIF5A;EIF5AL1;EIF5A2 Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-1-like;Eukaryotic translation initiation factor 5A-2 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.39 3.71 1 8 3 24 3 7 2 2 2 2 2 2 2 2 2 2 2 2 2 62.409 60.907 2;3;4 2.1337E-204 95343 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 247.89 218.8 9606000000 1071200000 2100400000 4312200000 22402000 14253000 74479000 26757000 58664000 35677000 100610000 263000000 204150000 74123000 276540000 971590000 27036 1949 24684 227529;227530;227531;227532;227533;227534;227535;227536;227537;227538;227539;227540;227541;227542;227543;227544;227545;227546;227547;227548;227549;227550;227551;227552;227553;227554;227555;227556;227557;227558;227559;227560;227561;227562;227563;227564 180828;180829;180830;180831;180832;180833;180834;180835;180836;180837;180838;180839;180840;180841;180842;180843;180844;180845;180846;180847;180848;180849;180850;180851;180852;180853;180854;180855;180856;180857;180858;180859;180860;180861 180844 26 KYEEALMAAEISQK Oxidation (M) 1625.7971 0.79707302 1594 P49754 VPS41 Vacuolar protein sorting-associated protein 41 homolog yes yes 0 1 1 By MS/MS 2 0 1 1 52.234 48.313 3 0.003895 60530 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 46.408 39.527 5547300 0 0 5547300 0 0 0 0 0 0 0 0 0 0 0 0 27037 1594 24685 227565 180862 180862 2562 1 KYEEALMAAEISQK Unmodified 1609.8022 0.8021584 1594 P49754 VPS41 Vacuolar protein sorting-associated protein 41 homolog yes yes 0 0 1 By MS/MS 2 0 1 1 65.125 61.369 3 0.01184 76137 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 40.278 30.478 5663700 0 0 5663700 0 0 0 0 0 0 0 0 0 0 0 0 27038 1594 24685 227566 180863;180864 180864 2 KYEEIDNAPEER Unmodified 1491.6842 0.68415175 1572 P49411 TUFM Elongation factor Tu, mitochondrial yes yes 0 0 1 By matching By MS/MS By matching By MS/MS By matching 10 0 5 1 1 1 1 1 26.429 26.828 2 0.034961 27610 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 65.5 55.547 21447000 0 0 0 0 0 0 0 1603700 0 0 5399100 0 3985000 2862500 7596800 27039 1572 24686 227567;227568;227569;227570;227571 180865 180865 1 KYEFGESDLR Unmodified 1242.5881 0.58806652 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 1 2 2 2 2 2 2 2 2 2 2 42.683 42.923 2;3 0.0005913 47198 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 70.675 51.543 477680000 0 0 0 11109000 12860000 51474000 27733000 30508000 32215000 35143000 56018000 58348000 48576000 31629000 82065000 27040 2392 24687 227572;227573;227574;227575;227576;227577;227578;227579;227580;227581;227582;227583;227584;227585;227586;227587;227588;227589;227590;227591;227592;227593 180866;180867;180868;180869;180870;180871;180872;180873;180874;180875;180876;180877;180878;180879;180880;180881;180882 180876 13 KYEFGESDLRSACDTVDTWLDDTAK Unmodified 2921.3025 0.30253213 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 2 By MS/MS By MS/MS 2.5 0.5 2 2 3 1 91.139 85.386 3;4 9.0211E-30 108987 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 103.85 88.347 111370000 109270000 2103600 0 0 0 0 0 0 0 0 0 0 0 0 0 27041 2392 24688 227594;227595;227596;227597 180883;180884;180885;180886 180886 4 KYELGRPAANTK Unmodified 1346.7306 0.73064844 1877 P62241 RPS8 40S ribosomal protein S8 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.799 18.992 3 0.0019122 18536 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 69.03 45.354 237090000 0 0 0 13720000 16314000 14882000 13751000 11445000 11033000 24401000 19460000 40878000 28624000 17354000 25231000 27042 1877 24689 227598;227599;227600;227601;227602;227603;227604;227605;227606;227607;227608;227609 180887;180888;180889;180890 180890 2 KYENILK Unmodified 906.51747 0.51746776 1712 P53367 ARFIP1 Arfaptin-1 yes yes 0 0 1 By MS/MS 2 0 1 1 36.247 29.818 2 0.045947 41733 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 121.31 7.6169 150230000 150230000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27043 1712 24690 227610 180891 180891 0 KYEPPRSEEVAVLK Unmodified 1643.8883 0.88827129 1675 P51946 CCNH Cyclin-H yes yes 0 0 2 By MS/MS 2 0 1 1 53.289 45.226 3 0.0054829 62610 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.112 36.591 73179000 73179000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27044 1675 24691 227611 180892 180892 0 KYEPPVPTR Unmodified 1085.5869 0.58694431 1875 P62191 PSMC1 26S protease regulatory subunit 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.923 30.114 2 0.0083415 32191 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 125.82 97.643 382840000 0 0 0 26913000 25963000 31516000 11657000 10346000 9911200 55844000 57462000 82656000 18634000 18611000 33328000 27045 1875 24692 227612;227613;227614;227615;227616;227617;227618;227619;227620;227621;227622;227623 180893;180894;180895;180896;180897;180898 180896 3 KYEPPVPTRVGK Unmodified 1369.7718 0.77178497 1875 P62191 PSMC1 26S protease regulatory subunit 4 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.191 34.373 3 0.037951 37234 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 44.406 39.908 139580000 0 0 0 8610800 7049500 8740800 6024300 4404900 5533300 20038000 24652000 29271000 4931200 5768000 14560000 27046 1875 24693 227624;227625;227626;227627;227628;227629;227630;227631;227632;227633;227634;227635 180899 180899 1 KYEQGFITDPVVLSPK Unmodified 1819.972 0.97200092 964 P12268 IMPDH2 Inosine-5'-monophosphate dehydrogenase 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.9 3.81 6 2 12 4 2 2 1 1 1 1 1 1 1 1 1 1 1 1 79.03 77.032 2;3 1.0479E-15 88243 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 103.04 92.187 931390000 76057000 412770000 188560000 4512700 5042400 11690000 11462000 16665000 12262000 18266000 25832000 31544000 9685800 28578000 78462000 27047 964 24694 227636;227637;227638;227639;227640;227641;227642;227643;227644;227645;227646;227647;227648;227649;227650;227651;227652;227653;227654;227655 180900;180901;180902;180903;180904;180905;180906;180907;180908;180909;180910;180911;180912;180913;180914;180915;180916;180917;180918 180904 12 KYGETANECGEAFFFYGK Unmodified 2116.92 0.9200417 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 0 1 By MS/MS 2 0 1 1 82.961 74.831 3 1.5488E-05 97835 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.618 71.859 40690000 40690000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27048 1564 24695 227656 180919 180919 1 KYIDNPK Unmodified 876.47052 0.47051757 3608 Q92499 DDX1 ATP-dependent RNA helicase DDX1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 13.296 10.14 2 0.041317 15381 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 125.81 74.848 44592000 40968000 0 3624700 0 0 0 0 0 0 0 0 0 0 0 0 27049 3608 24696 227657;227658 180920 180920 1 KYNILGTNAIMDK Unmodified 1479.7755 0.77554972 4162 Q9BUJ2 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 76.015 67.885 3 0.0085064 89530 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 35.054 29.739 6731400 6731400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27050 4162 24697 227659 180921 180921 1 KYNPTWHCIVGR Unmodified 1529.7562 0.75615168 1943 P63167;Q96FJ2 DYNLL1;DYNLL2 Dynein light chain 1, cytoplasmic;Dynein light chain 2, cytoplasmic yes no 0 0 1 By MS/MS By matching By MS/MS 10 0 3 1 1 1 47.91 48.189 3 0.020303 52875 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.563 38.949 8875200 0 0 0 0 0 0 0 0 0 0 0 0 5034800 3840300 0 27051 1943 24698 227660;227661;227662 180922;180923 180922 2 KYPDYESK Unmodified 1028.4815 0.48147619 5206 Q9Y4L1 HYOU1 Hypoxia up-regulated protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 16.999 13.561 2 0.024325 17672 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 111.74 85.845 110960000 5909800 102410000 2645100 0 0 0 0 0 0 0 0 0 0 0 0 27052 5206 24699 227663;227664;227665;227666 180924;180925 180924 0 KYQEEVPVYVPK Unmodified 1477.7817 0.78168095 311 O43264 ZW10 Centromere/kinetochore protein zw10 homolog yes yes 0 0 1 By MS/MS 3 0 1 1 61.894 57.11 3 0.019015 70122 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 42.095 28.895 11028000 0 11028000 0 0 0 0 0 0 0 0 0 0 0 0 0 27053 311 24700 227667 180926 180926 1 KYQELMNVK Unmodified 1151.6009 0.60087982 99 Q6KB66;CON__Q6KB66-1 KRT80 Keratin, type II cytoskeletal 80 yes no 0 0 1 By MS/MS 10 0 1 1 51.253 51.315 2 0.027918 58065 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 104.45 77.486 + 3527600 0 0 0 0 0 0 3527600 0 0 0 0 0 0 0 0 27054 99 24701 227668 180927 180927 1 KYQEQLVQEQELAK Unmodified 1732.8996 0.89956426 1463 P42695 NCAPD3 Condensin-2 complex subunit D3 yes yes 0 0 1 By MS/MS 2 0 1 1 53.054 47.262 3 0.043278 61269 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 18.669 8.597 18800000 0 18800000 0 0 0 0 0 0 0 0 0 0 0 0 0 27055 1463 24702 227669 180928 180928 1 KYSDADIEPFLK Unmodified 1424.7187 0.71874635 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 68.613 68.772 3 0.017614 78114 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 20.12 16.258 32699000 0 0 0 0 2515400 0 0 0 0 4685900 4660000 9304100 3322400 0 8211600 27056 2361 24703 227670;227671;227672;227673;227674;227675 180929;180930;180931 180929 3 KYSEIEEFYQK Unmodified 1462.698 0.6980109 2709 Q53T59 HS1BP3 HCLS1-binding protein 3 yes yes 0 0 1 By matching By MS/MS 2 0 2 1 1 61.801 55.76 3 0.01142 69186 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 58.132 51.446 10038000 1594000 0 8444400 0 0 0 0 0 0 0 0 0 0 0 0 27057 2709 24704 227676;227677 180932 180932 0 KYSSVSEPAK Unmodified 1094.5608 0.56078914 5085 Q9Y263 PLAA Phospholipase A-2-activating protein yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 13.769 10.604 2 1.9306E-10 15856 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 176.6 91.984 117760000 108620000 0 9139800 0 0 0 0 0 0 0 0 0 0 0 0 27058 5085 24705 227678;227679 180933;180934 180933 2 KYTQFNPK Unmodified 1024.5342 0.53418046 5075 Q9Y223 GNE Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase;UDP-N-acetylglucosamine 2-epimerase (hydrolyzing);N-acetylmannosamine kinase yes yes 0 0 1 By MS/MS 2 0 1 1 24.687 19.61 2 0.01201 27880 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 119.41 88.177 39073000 39073000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27059 5075 24706 227680 180935 180935 1 KYVHADAPTNK Unmodified 1242.6357 0.63568542 3687 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 yes yes 0 0 1 By MS/MS 2 0 1 1 13.808 9.8125 2 0.021233 14771 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.533 40.281 2809300 2809300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27060 3687 24707 227681 180936 180936 0 KYVSVCEGPLK Unmodified 1278.6642 0.66420836 25 A6NDU8 C5orf51 UPF0600 protein C5orf51 yes yes 0 0 1 By MS/MS 2 0 1 1 50.302 42.402 3 0.030585 58766 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.661 34.093 13365000 13365000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27061 25 24708 227682 180937 180937 0 LAAAANCQVSK Unmodified 1131.5706 0.57064232 4364 Q9H2F5 EPC1 Enhancer of polycomb homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 17.973 18.116 2 0.0043662 18360 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 61.65 28.809 21917000 0 0 0 0 2166900 2375700 1344400 2249100 2000700 3190200 3311500 0 2668700 2610000 0 27062 4364 24709 227683;227684;227685;227686;227687;227688;227689;227690;227691;227692;227693;227694 180938;180939;180940;180941;180942;180943;180944;180945;180946;180947;180948;180949 180945 12 LAAAEGLEPK Unmodified 997.54441 0.5444108 1437 P41236;Q6NXS1 PPP1R2;PPP1R2P3 Protein phosphatase inhibitor 2;Protein phosphatase inhibitor 2-like protein 3 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.8 4 1 8 1 3 1 1 1 1 1 1 1 1 1 40.013 38.183 1;2 5.9226E-06 49235 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.12 52.932 2511700000 59762000 2097300000 29446000 13716000 11988000 0 0 13442000 0 19181000 67883000 69969000 15838000 0 113170000 27063 1437 24710 227695;227696;227697;227698;227699;227700;227701;227702;227703;227704;227705;227706;227707 180950;180951;180952;180953;180954;180955;180956;180957;180958;180959;180960;180961;180962;180963;180964;180965;180966;180967 180952 17 LAAAISEVVSQTPASTTQAGAPPR Unmodified 2322.2179 0.21793829 1113 P20810 CAST Calpastatin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.497 76.555 3 2.9508E-78 87900 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 138.04 133.28 114030000 0 0 0 3398400 5327500 4198600 7863600 8293900 7411600 7368900 13574000 14408000 5703500 8295500 28182000 27064 1113 24711 227708;227709;227710;227711;227712;227713;227714;227715;227716;227717;227718;227719 180968;180969;180970;180971;180972;180973;180974;180975;180976;180977;180978;180979;180980 180971 13 LAAAISEVVSQTPASTTQAGAPPRDTSQSDK Unmodified 3083.5371 0.53710017 1113 P20810 CAST Calpastatin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 4 24 2 2 2 2 2 2 2 2 2 2 2 2 2 2 71.712 71.219 3;4 8.6336E-72 82090 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 109.41 101.34 695720000 0 140880000 70742000 10841000 23634000 21186000 25283000 22760000 26921000 36936000 58092000 84403000 28250000 43172000 102630000 27065 1113 24712 227720;227721;227722;227723;227724;227725;227726;227727;227728;227729;227730;227731;227732;227733;227734;227735;227736;227737;227738;227739;227740;227741;227742;227743;227744;227745;227746;227747 180981;180982;180983;180984;180985;180986;180987;180988;180989;180990;180991;180992;180993;180994;180995;180996;180997;180998;180999;181000;181001;181002 180991 20 LAAAQGQAPLEPTQDGSAIETCPK Unmodified 2452.1904 0.19040291 3076 Q7Z2Z2 EFTUD1 Elongation factor Tu GTP-binding domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 61.973 62.063 3 6.4648E-35 70971 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 100.19 91.797 69260000 0 0 0 4245800 3411500 11821000 0 2905500 0 7466400 6972100 10137000 6661700 5714800 9924000 27066 3076 24713 227748;227749;227750;227751;227752;227753;227754;227755;227756;227757 181003;181004;181005;181006;181007;181008;181009;181010;181011 181003 9 LAAAVAGPGGLSGSTLVDGR Unmodified 1767.9479 0.94791144 5061 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 74.25 74.47 2 0.0012072 85830 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 49.333 38.408 8695100 0 0 0 0 0 0 0 0 0 4351800 0 0 0 0 4343300 27067 5061 24714 227758;227759 181012 181012 1 LAADAGTFLSR Unmodified 1120.5877 0.58767259 5139 Q9Y371 SH3GLB1 Endophilin-B1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 2 1 1 1 1 1 62.219 61.958 2 2.0671E-05 71158 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 123.86 94.487 895940000 0 0 2777100 46289000 78318000 76987000 76994000 101770000 0 101060000 97829000 118790000 127420000 67707000 0 27068 5139 24715 227760;227761;227762;227763;227764;227765;227766;227767;227768;227769;227770;227771 181013;181014;181015;181016;181017;181018;181019;181020;181021;181022;181023;181024 181017 12 LAADDFR Unmodified 806.39227 0.39226725 56;70;72;84;814;981;76;57;68;86;87;52;94;111 CON__P13645;P13645;CON__Q148H6;CON__Q7Z3Y7;Q7Z3Y7;CON__Q2M2I5;Q2M2I5;CON__A2AB72;CON__P02535-1;CON__P02533;P02533;CON__P08779;P08779;CON__Q9Z2K1;CON__Q3ZAW8;CON__P19012;P19012;P13646;CON__ENSEMBL:ENSP00000377550;P05783;CON__Q04695;Q04695;CON__Q497I4;CON__Q14525;Q14525;CON__Q15323;CON__Q9UE12;Q15323;CON__REFSEQ:XP_986630;CON__P08727;P08727;CON__O76013;O76013 KRT10;KRT28;KRT24;KRT14;KRT16;KRT15;KRT13;KRT18;KRT17;KRT33B;KRT31;KRT19;KRT36 Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 28;Keratin, type I cytoskeletal 24;Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16;Keratin, type I cytoskeletal 15;Keratin, type I cytoskeletal 13;Keratin, type I cytoskeletal 18;Keratin, type I cytoskeletal 17;Keratin, type I cuticular Ha3-II;Keratin, type I cuticular Ha1;Keratin, type I cytoskeletal 19;Keratin, type I cuticular Ha6 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 39 4 2 3 4 3 3 3 2 4 4 4 3 32.58 32.778 1;2 1.0028E-05 37754 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 158.53 89.144 + 124140000000 0 0 0 18975000000 7213500000 8222400000 7887700000 11558000000 4950900000 11765000000 13195000000 17106000000 11607000000 6645300000 5010000000 27069 72;57;56;70;76;981;814;84;94;86;87;111;68;52 24716 227772;227773;227774;227775;227776;227777;227778;227779;227780;227781;227782;227783;227784;227785;227786;227787;227788;227789;227790;227791;227792;227793;227794;227795;227796;227797;227798;227799;227800;227801;227802;227803;227804;227805;227806;227807;227808;227809;227810 181025;181026;181027;181028;181029;181030;181031;181032;181033;181034;181035;181036;181037;181038;181039;181040;181041;181042;181043;181044;181045;181046;181047;181048;181049;181050;181051;181052;181053;181054;181055;181056;181057;181058;181059;181060;181061;181062;181063;181064;181065;181066;181067;181068;181069;181070;181071 181059 46 LAADDFRLK Unmodified 1047.5713 0.57129425 72;981;76;57 CON__P13645;P13645;CON__Q148H6;CON__Q7Z3Y7;Q7Z3Y7;CON__Q2M2I5;Q2M2I5;CON__P02535-1;CON__P19012;P19012;P13646;CON__ENSEMBL:ENSP00000377550 KRT10;KRT28;KRT24;KRT15;KRT13 Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 28;Keratin, type I cytoskeletal 24;Keratin, type I cytoskeletal 15;Keratin, type I cytoskeletal 13 no no 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.333 52.479 2 1.3251E-06 59371 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 176.09 0 + 871570000 0 0 0 119990000 14070000 38422000 24457000 52504000 79637000 71923000 45187000 168210000 111640000 100090000 45442000 27070 72;57;76;981 24717 227811;227812;227813;227814;227815;227816;227817;227818;227819;227820;227821;227822 181072;181073;181074;181075;181076 181072 0 LAADEDDDDDDEEDDDEDDDDDDFDDEEAEEK Unmodified 3722.1951 0.19506631 830 P06748 NPM1 Nucleophosmin yes yes 0 0 0 By MS/MS 1 0 2 2 105.3 110.56 3;4 1.2362E-205 90846 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 196.55 196.55 506090000 506090000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27071 830 24718 227823;227824 181077;181078;181079;181080;181081;181082 181077 6 LAADGTVMNTFAHK Unmodified 1474.7238 0.7238485 4864 Q9UBY9 HSPB7 Heat shock protein beta-7 yes yes 0 0 0 By MS/MS By MS/MS 2 0 4 2 2 65.284 59.255 2;3 0.00024722 73374 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 53.136 45.771 106310000 89628000 0 16683000 0 0 0 0 0 0 0 0 0 0 0 0 27072 4864 24719 227825;227826;227827;227828 181083;181084;181085 181085 2 LAADHPFLK Unmodified 1010.5549 0.5549159 3954 Q96QA5 GSDMA Gasdermin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.801 40.979 2 0.0033037 45758 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 93.374 73.587 225440000 0 0 0 72962000 8212500 11140000 12119000 13237000 10157000 19344000 14320000 30216000 18271000 10301000 5163300 27073 3954 24720 227829;227830;227831;227832;227833;227834;227835;227836;227837;227838;227839;227840 181086;181087;181088;181089;181090;181091;181092;181093;181094;181095;181096;181097;181098 181092 13 LAADLYNIK Unmodified 1019.5651 0.56514624 4994 Q9ULH1 ASAP1 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 66.873 60.957 2 0.0096112 77888 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.833 34.43 21421000 0 21421000 0 0 0 0 0 0 0 0 0 0 0 0 0 27074 4994 24721 227841 181099 181099 1 LAADPDPNVK Unmodified 1038.5346 0.53457439 2167 Q08AM6 VAC14 Protein VAC14 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 29.018 28.68 2 0.0072305 31256 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 62.969 53.381 124190000 0 32483000 0 0 8154000 12204000 8822800 0 7630400 12147000 16225000 0 0 10455000 16071000 27075 2167 24722 227842;227843;227844;227845;227846;227847;227848;227849;227850 181100;181101;181102;181103;181104;181105;181106;181107;181108;181109 181100 10 LAADPSVVNLGQGFPDISPPTYVK Unmodified 2484.29 0.2900406 2998 Q6YP21 CCBL2 Kynurenine--oxoglutarate transaminase 3 yes yes 0 0 0 By MS/MS By MS/MS 4.25 3.34 2 1 1 3 1 94.709 91.522 2;3 3.5303E-116 113116 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 170.11 156.03 143260000 0 140620000 0 0 0 0 0 0 0 0 0 0 0 0 2640000 27076 2998 24723 227851;227852;227853;227854 181110;181111;181112 181111 3 LAADTLAVRQK Unmodified 1184.6877 0.68772099 2600 Q16254 E2F4 Transcription factor E2F4 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 39.337 34.281 3 0.038796 47597 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.167 49.067 15432000 12358000 0 3074300 0 0 0 0 0 0 0 0 0 0 0 0 27077 2600 24724 227855;227856 181113 181113 0 LAADVILK Unmodified 841.5273 0.52730417 3489 Q8TCG1 KIAA1524 Protein CIP2A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 59.514 58.574 2 0.034949 76122 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.789 16.242 118190000 0 92506000 6720400 0 0 2994000 1951700 1815900 1793900 4126500 2974300 0 0 3311200 0 27078 3489 24725 227857;227858;227859;227860;227861;227862;227863;227864;227865 181114;181115 181115 2 LAAEIDDRK Unmodified 1029.5455 0.54547343 3942 Q96P16 RPRD1A Regulation of nuclear pre-mRNA domain-containing protein 1A yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 19.585 19.789 2 0.033729 20213 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 89.698 59.194 39518000 0 0 0 2017600 2830000 3024300 2835300 0 1987500 4358900 3522900 4838000 4374200 3555900 6173400 27079 3942 24726 227866;227867;227868;227869;227870;227871;227872;227873;227874;227875;227876 181116;181117 181117 1 LAAELEDR Unmodified 915.46616 0.46616048 4569 Q9NQG5 RPRD1B Regulation of nuclear pre-mRNA domain-containing protein 1B yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 30.822 30.998 2 0.0099634 33696 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 81.191 31.064 144780000 0 0 0 0 14835000 14992000 14416000 12282000 11470000 14478000 23865000 0 17207000 0 21239000 27080 4569 24727 227877;227878;227879;227880;227881;227882;227883;227884;227885;227886 181118;181119;181120;181121;181122;181123 181121 6 LAAELEDRR Unmodified 1071.5673 0.5672715 4569 Q9NQG5 RPRD1B Regulation of nuclear pre-mRNA domain-containing protein 1B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 24.963 25.163 2 0.026509 27069 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 123.69 51.975 56761000 0 0 0 0 4645500 5316800 6763900 0 5530300 5607100 5045600 7614300 7596300 8641400 0 27081 4569 24728 227887;227888;227889;227890;227891;227892;227893;227894;227895 181124 181124 1 LAAEQELIR Unmodified 1041.5819 0.58185893 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.753 49.909 2 0.0032698 55263 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 93.162 60.322 227590000 0 0 0 31630000 20764000 9827500 20145000 18010000 18156000 17948000 21202000 19857000 15818000 16804000 17429000 27082 2501 24729 227896;227897;227898;227899;227900;227901;227902;227903;227904;227905;227906;227907 181125;181126;181127;181128;181129;181130;181131;181132;181133;181134;181135;181136;181137;181138 181134 14 LAAFGQLHK Unmodified 983.55525 0.55525025 2207 Q12906 ILF3 Interleukin enhancer-binding factor 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 41.663 41.827 2 0.0051747 46760 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 81.297 51.959 292280000 0 0 0 22548000 21083000 24806000 18170000 21811000 0 31667000 37335000 34590000 0 31622000 48652000 27083 2207 24730 227908;227909;227910;227911;227912;227913;227914;227915;227916;227917;227918 181139;181140;181141;181142;181143;181144;181145;181146;181147;181148;181149;181150;181151 181141 13 LAAGRPFNTYPR Unmodified 1361.7204 0.7204181 714 O96013 PAK4 Serine/threonine-protein kinase PAK 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 44.383 44.564 3 0.00088469 50017 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 63.091 31.494 77248000 0 0 0 0 9675700 0 11955000 0 0 15283000 12369000 0 0 0 27966000 27084 714 24731 227919;227920;227921;227922;227923 181152;181153;181154;181155;181156;181157 181153 6 LAAGSAIMK Oxidation (M) 876.47389 0.47388839 2647 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 21.227 21.45 2 0.0050367 21793 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 71.877 20.912 105810000 0 0 0 11041000 0 20032000 12555000 0 0 11636000 12690000 14558000 12960000 10335000 0 27085 2647 24732 227924;227925;227926;227927;227928;227929;227930;227931 181158;181159;181160;181161;181162;181163;181164 181163 4311 7 LAAIAESGVER Unmodified 1114.5982 0.59823728 1230 P28072 PSMB6 Proteasome subunit beta type-6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.179 41.358 2 6.7629E-06 44868 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 140.83 97.589 651850000 0 0 0 45152000 15717000 15246000 16341000 24796000 12036000 29898000 95216000 90033000 28551000 54308000 224560000 27086 1230 24733 227932;227933;227934;227935;227936;227937;227938;227939;227940;227941;227942;227943 181165;181166;181167;181168;181169;181170;181171;181172;181173;181174;181175;181176;181177 181172 12 LAAIGEATR Unmodified 900.50288 0.50288033 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 31.379 30.999 2 0.0031256 34157 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 91.069 33.788 37960000 0 0 0 24404000 13557000 0 0 0 0 0 0 0 0 0 0 27087 2501 24734 227944;227945 181178;181179;181180;181181 181180 4 LAAIGEATRLK Unmodified 1141.6819 0.68190733 2501 Q15149 PLEC Plectin yes yes 0 0 1 By MS/MS 2 0 1 1 55.432 47.324 3 0.020118 64981 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.82 37.339 30318000 30318000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27088 2501 24735 227946 181182 181182 0 LAALAEALK Unmodified 898.54877 0.54876789 2950 Q6PI26 SHQ1 Protein SHQ1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 70.611 64.699 2 0.0080137 79455 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 91.318 50.091 35483000 11549000 16529000 7405200 0 0 0 0 0 0 0 0 0 0 0 0 27089 2950 24736 227947;227948;227949 181183;181184;181185 181185 3 LAALASDFSEDMLQEK Oxidation (M) 1782.8346 0.83458074 3548 Q8WUM0 NUP133 Nuclear pore complex protein Nup133 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 75.437 74.582 2 2.0933E-08 86145 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 90.614 81.292 75944000 0 40626000 0 3638600 0 6214300 5227100 4783800 5200700 0 4894000 5359100 0 0 0 27090 3548 24737 227950;227951;227952;227953;227954;227955;227956;227957;227958 181186;181187;181188;181189;181190;181191;181192;181193 181186 5043 8 LAALASDFSEDMLQEK Unmodified 1766.8397 0.83966612 3548 Q8WUM0 NUP133 Nuclear pore complex protein Nup133 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 85.311 83.161 2 4.6269E-58 103766 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 173.72 159.04 224860000 12732000 191750000 0 0 1413900 2435100 0 0 0 4756600 0 0 0 0 11771000 27091 3548 24737 227959;227960;227961;227962;227963;227964 181194;181195;181196;181197;181198 181195 5 LAALEEQR Unmodified 928.49779 0.49779495 167 O00541 PES1 Pescadillo homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 2 1 1 1 1 1 1 1 1 1 27.685 27.822 2 0.0065186 30328 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 100.19 41.207 771500000 0 0 0 92243000 84232000 86573000 62993000 52055000 0 88934000 0 95048000 77226000 57015000 75181000 27092 167 24738 227965;227966;227967;227968;227969;227970;227971;227972;227973;227974;227975 181199;181200;181201;181202;181203;181204;181205;181206;181207;181208 181207 6 LAALEEQRMEGK Oxidation (M) 1389.6922 0.69221402 167 O00541 PES1 Pescadillo homolog yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 22.843 23.048 2;3 0.00016665 24646 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 79.036 66.114 525910000 0 0 0 45729000 42901000 44208000 41308000 25179000 28365000 69733000 39316000 69703000 46905000 26717000 45844000 27093 167 24739 227976;227977;227978;227979;227980;227981;227982;227983;227984;227985;227986;227987;227988;227989;227990;227991;227992;227993;227994;227995;227996;227997;227998;227999 181209;181210;181211;181212;181213;181214;181215;181216;181217;181218;181219;181220;181221;181222 181222 232 14 LAALEEQRMEGK Unmodified 1373.6973 0.6972994 167 O00541 PES1 Pescadillo homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 35.276 35.458 2;3 1.8083E-05 39697 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 95.401 79.27 847410000 0 0 0 50503000 55393000 64359000 73495000 51184000 86133000 99706000 70262000 68968000 65164000 62492000 99753000 27094 167 24739 228000;228001;228002;228003;228004;228005;228006;228007;228008;228009;228010;228011;228012;228013;228014;228015;228016;228017;228018;228019;228020;228021;228022;228023 181223;181224;181225;181226;181227;181228;181229;181230;181231;181232;181233;181234;181235;181236;181237 181237 12 LAALEQEEAEAREK Unmodified 1585.7948 0.79476484 399 O60437 PPL Periplakin yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By matching 10 0 5 1 1 1 1 1 40.734 40.784 3 5.7135E-12 45826 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 83.729 59.887 22448000 0 0 0 6988000 2486000 0 0 0 0 3134600 0 0 3871800 0 5967800 27095 399 24740 228024;228025;228026;228027;228028 181238 181238 1 LAALESNK Unmodified 844.46543 0.46543219 4967 Q9UKI8 TLK1 Serine/threonine-protein kinase tousled-like 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 22.402 18.988 2 0.0098887 25239 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.7 40.657 29520000 0 28264000 1256100 0 0 0 0 0 0 0 0 0 0 0 0 27096 4967 24741 228029;228030 181239 181239 1 LAALESSIEQRLK Unmodified 1456.8249 0.82494275 3953 Q96Q15 SMG1 Serine/threonine-protein kinase SMG1 yes yes 0 0 1 By MS/MS 2 0 1 1 78.43 70.299 3 0.0003628 92462 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.644 60.433 15835000 15835000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27097 3953 24742 228031 181240;181241 181240 2 LAALNPESNTAGLDIFAK Unmodified 1843.968 0.96797818 140 O00299 CLIC1 Chloride intracellular channel protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.5 3.85 7 3 12 2 6 2 1 1 1 1 1 1 1 1 1 1 1 1 87.633 86.44 2;3 1.6726E-96 103328 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 205.8 175.99 8484800000 3557700 7786800000 158610000 3827500 8343500 11875000 9640300 14166000 9704700 25266000 64882000 63714000 10396000 44539000 269500000 27098 140 24743 228032;228033;228034;228035;228036;228037;228038;228039;228040;228041;228042;228043;228044;228045;228046;228047;228048;228049;228050;228051;228052;228053 181242;181243;181244;181245;181246;181247;181248;181249;181250;181251;181252;181253;181254;181255;181256;181257;181258;181259;181260;181261;181262;181263;181264;181265;181266;181267 181256 25 LAALPNVYEVISK Unmodified 1415.8024 0.8024164 1333 P33992 MCM5 DNA replication licensing factor MCM5 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 86.819 86.887 2 6.4519E-05 100313 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 104.79 96.87 260060000 0 0 0 4372100 10502000 18134000 12262000 14762000 14575000 24547000 29040000 33864000 10087000 21628000 66284000 27099 1333 24744 228054;228055;228056;228057;228058;228059;228060;228061;228062;228063;228064;228065 181268;181269;181270;181271;181272;181273;181274;181275;181276 181271 9 LAALSASLAR Unmodified 971.57638 0.57637963 167 O00541 PES1 Pescadillo homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.898 56.023 2 0.0019157 65089 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 99.802 46.636 992930000 0 0 0 73044000 95965000 73811000 94695000 66360000 56831000 96202000 71795000 110840000 84152000 66709000 102520000 27100 167 24745 228066;228067;228068;228069;228070;228071;228072;228073;228074;228075;228076;228077 181277;181278;181279;181280;181281;181282;181283;181284;181285;181286;181287;181288;181289;181290;181291;181292;181293;181294;181295;181296;181297;181298;181299;181300;181301 181301 25 LAALSDHNPSAPR Unmodified 1347.6895 0.6895119 4492 Q9HAW4 CLSPN Claspin yes yes 0 0 0 By MS/MS 10 0 1 1 33.648 33.216 3 0.011873 36616 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 38.189 24.789 13263000 0 0 0 0 13263000 0 0 0 0 0 0 0 0 0 0 27101 4492 24746 228078 181302;181303 181303 2 LAALTQGSYLHQR Unmodified 1456.7787 0.77866126 5209 Q9Y4R8 TELO2 Telomere length regulation protein TEL2 homolog yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 49.798 50.193 3 0.0027035 55654 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.29 56.903 61148000 0 0 0 0 0 0 0 9671400 0 0 0 0 21810000 0 29666000 27102 5209 24747 228079;228080;228081 181304 181304 0 LAAMANNLQK Oxidation (M) 1088.5648 0.56482866 3139 Q86U06 RBM23 Probable RNA-binding protein 23 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 20.793 20.978 2 0.0016677 21654 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 82.671 47.316 41373000 0 0 0 0 3445200 3612700 3341800 2637100 3468400 4553300 5665900 9681700 4967200 0 0 27103 3139 24748 228082;228083;228084;228085;228086;228087;228088;228089;228090;228091 181305;181306;181307;181308;181309;181310;181311;181312 181309 4762 8 LAANAFLAQR Unmodified 1073.5982 0.5981777 425 O60701 UGDH UDP-glucose 6-dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.589 60.695 2 0.00015022 68268 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 142.36 115.76 101790000 0 0 0 6403500 3558700 0 0 0 3672200 7612800 17460000 16261000 6620800 13300000 26902000 27104 425 24749 228092;228093;228094;228095;228096;228097;228098;228099;228100;228101;228102;228103 181313;181314;181315;181316;181317;181318;181319;181320;181321;181322;181323;181324 181316 12 LAANPDPK Unmodified 824.43922 0.43921744 2397 Q14241 TCEB3 Transcription elongation factor B polypeptide 3 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 13.595 13.729 2 0.017693 13177 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 65.252 20.641 75701000 0 0 0 5576700 4928200 7300400 5748100 0 6208800 9373300 8814100 8952300 11615000 7184300 0 27105 2397 24750 228104;228105;228106;228107;228108;228109;228110;228111;228112;228113 181325;181326;181327;181328;181329 181328 5 LAANSDHLMQIQK Unmodified 1467.7504 0.7503976 4672 Q9NVM9 ASUN Protein asunder homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 6.44 3.98 4 5 2 2 1 1 1 1 1 47.882 45.385 2;3 5.9645E-06 62990 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 126.71 74.218 220720000 123830000 0 36899000 0 6604000 7081000 0 0 0 0 17179000 13039000 0 0 16094000 27106 4672 24751 228114;228115;228116;228117;228118;228119;228120;228121;228122 181330;181331;181332;181333;181334;181335;181336 181332 6 LAANSDHLMQIQK Oxidation (M) 1483.7453 0.74531222 4672 Q9NVM9 ASUN Protein asunder homolog yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 6 2 2 2 36.479 31.571 2;3 5.021E-21 43902 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 133.89 106.15 148190000 64060000 40623000 43504000 0 0 0 0 0 0 0 0 0 0 0 0 27107 4672 24751 228123;228124;228125;228126;228127;228128 181337;181338;181339;181340;181341 181339 6085 3 LAANSSLFTQR Unmodified 1206.6357 0.63568542 189 O14578 CIT Citron Rho-interacting kinase yes yes 0 0 0 By MS/MS 10 0 1 1 54.072 54.712 2 0.0015064 61266 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.275 50.315 7169300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7169300 27108 189 24752 228129 181342 181342 1 LAANTLSTPSGSSLQRPK Unmodified 1826.985 0.98502522 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.272 47.436 3 2.693E-08 53388 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 77.795 62.203 398640000 0 0 0 22119000 24106000 27624000 29045000 22116000 27421000 45110000 46231000 47657000 32395000 26829000 47989000 27109 3443 24753 228130;228131;228132;228133;228134;228135;228136;228137;228138;228139;228140;228141 181343;181344;181345;181346;181347;181348;181349;181350;181351;181352;181353;181354 181351 12 LAAQENRPVTDHLDEQAVQGLK Unmodified 2431.2456 0.24555002 4152 Q9BTW9 TBCD Tubulin-specific chaperone D yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.12 3.39 4 13 1 1 2 1 2 1 1 2 2 1 1 2 58.305 57.221 3;4 1.1403E-75 64064 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 135.21 125.4 340950000 15111000 18238000 139100000 6273000 0 30180000 0 0 7207100 21182000 20274000 25176000 8852600 11621000 37732000 27110 4152 24754 228142;228143;228144;228145;228146;228147;228148;228149;228150;228151;228152;228153;228154;228155;228156;228157;228158 181355;181356;181357;181358;181359;181360;181361;181362;181363;181364;181365 181360 11 LAAQESSETEDMSVPR Unmodified 1748.7887 0.78869318 2840 Q641Q2 FAM21A WASH complex subunit FAM21A yes yes 0 0 0 By MS/MS 10 0 1 1 46.298 47.035 2 0.0004904 51955 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.924 58.38 3455500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3455500 27111 2840 24755 228159 181366 181366 1 LAAQFIPK Unmodified 886.52764 0.52763852 4278 Q9BZZ5 API5 Apoptosis inhibitor 5 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 56.378 56.461 2 0.046281 62927 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.377 62.857 76654000 0 0 0 5735900 6476700 6586400 6965700 0 6025600 12746000 0 11929000 6520000 0 13668000 27112 4278 24756 228160;228161;228162;228163;228164;228165;228166;228167;228168 181367 181367 0 LAAQSQHVGFAR Unmodified 1283.6735 0.67346791 2834 Q5VZL5 ZMYM4 Zinc finger MYM-type protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.828 31.017 3 0.0006619 32520 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 71.153 48.679 197370000 0 0 0 13466000 14042000 19869000 14092000 11820000 14120000 13887000 12190000 32262000 18558000 13901000 19163000 27113 2834 24757 228169;228170;228171;228172;228173;228174;228175;228176;228177;228178;228179;228180 181368;181369;181370;181371;181372;181373;181374;181375;181376;181377 181374 10 LAASASTQQLQEVK Unmodified 1472.7835 0.78347187 631 O95235 KIF20A Kinesin-like protein KIF20A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 43.971 44.544 2 6.3423E-27 48805 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 156.51 138.64 40239000 0 0 0 0 0 0 0 0 0 0 14433000 8718700 7525500 0 9562200 27114 631 24758 228181;228182;228183;228184;228185;228186;228187;228188;228189 181378;181379;181380;181381;181382;181383;181384;181385;181386 181380 9 LAASGEGGLQELSGHFENQK Unmodified 2070.997 0.99704647 2621 Q16643 DBN1 Drebrin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69.634 68.62 3 1.5607E-103 87851 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145.88 124.94 554160000 13290000 102830000 91650000 9736000 14785000 24357000 15625000 18245000 17919000 32764000 33766000 60890000 26012000 25201000 67096000 27115 2621 24759 228190;228191;228192;228193;228194;228195;228196;228197;228198;228199;228200;228201;228202;228203;228204 181387;181388;181389;181390;181391;181392;181393;181394;181395;181396;181397;181398;181399;181400;181401;181402 181390 16 LAASIAPEIYGHEDVK Unmodified 1711.8781 0.87810054 1334 P33993 MCM7 DNA replication licensing factor MCM7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.82 3.83 7 2 13 4 3 2 1 1 1 1 1 1 1 1 1 1 1 2 69.328 66.927 2;3 3.0964E-08 86695 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.38 126.94 2404800000 122640000 1719700000 249670000 4862700 10833000 40955000 13807000 17208000 13176000 30583000 27444000 34408000 17632000 31268000 70684000 27116 1334 24760 228205;228206;228207;228208;228209;228210;228211;228212;228213;228214;228215;228216;228217;228218;228219;228220;228221;228222;228223;228224;228225;228226 181403;181404;181405;181406;181407;181408;181409;181410;181411;181412;181413;181414;181415;181416;181417;181418;181419;181420;181421;181422;181423 181407 17 LAASIAPEIYGHEDVKK Unmodified 1839.9731 0.97306355 1334 P33993 MCM7 DNA replication licensing factor MCM7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 6 2 3 3 2 65.663 59.937 3;4 3.6214E-07 77625 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.141 68.929 368670000 79656000 210670000 78343000 0 0 0 0 0 0 0 0 0 0 0 0 27117 1334 24761 228227;228228;228229;228230;228231;228232;228233;228234 181424;181425;181426;181427;181428;181429;181430 181424 4 LAATGREDQGIETDDEK Unmodified 1846.8545 0.85446456 42 B7ZAP0 RABGAP1L Rab GTPase-activating protein 1-like, isoform 10 yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 27.089 26.39 3 0.00047292 35058 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.044 34.986 55179000 8709500 13760000 0 1982200 0 4383400 0 4466300 2540200 3387800 4846000 5799900 1905500 0 3399100 27118 42 24762 228235;228236;228237;228238;228239;228240;228241;228242;228243;228244;228245 181431;181432;181433;181434;181435 181434 5 LAATNALLNSLEFTK Unmodified 1604.8774 0.87737225 2457 Q14974 KPNB1 Importin subunit beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.11 3.8 6 1 12 2 3 2 1 1 1 1 1 1 1 1 1 1 1 1 90.786 89.031 2;3 4.28E-59 103107 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 215.72 119.71 1537600000 640860000 640800000 16996000 2998900 5099800 10667000 4651600 9042300 5786700 40476000 28413000 16213000 5500300 14310000 95823000 27119 2457 24763 228246;228247;228248;228249;228250;228251;228252;228253;228254;228255;228256;228257;228258;228259;228260;228261;228262;228263;228264 181436;181437;181438;181439;181440;181441;181442;181443;181444;181445;181446;181447;181448;181449;181450;181451;181452;181453;181454;181455 181441 20 LAATSEVGDLPWK Unmodified 1385.7191 0.7190807 4530 Q9HD67 MYO10 Unconventional myosin-X yes yes 0 0 0 By MS/MS 2 0 1 1 81.076 76.372 2 7.1789E-10 95014 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.82 85.258 46319000 0 46319000 0 0 0 0 0 0 0 0 0 0 0 0 0 27120 4530 24764 228265 181456 181456 1 LAAVALINAAIQK Unmodified 1294.7973 0.79727144 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 86.725 86.848 2 0.0015076 100375 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.969 41.119 8411500 0 0 0 0 0 0 0 0 0 2799200 0 0 0 875390 4736900 27121 1518 24765 228266;228267;228268 181457;181458 181458 2 LAAVAQGEEENASR Unmodified 1443.6954 0.69538514 3242 Q8IWJ2 GCC2 GRIP and coiled-coil domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 27.278 27.481 2 6.9923E-14 29197 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 114.83 95.047 54497000 0 0 0 2934500 2985600 4637000 3843900 2886700 0 4216800 5565300 6429600 3455700 5144600 12397000 27122 3242 24766 228269;228270;228271;228272;228273;228274;228275;228276;228277;228278;228279 181459;181460;181461;181462;181463;181464;181465;181466;181467;181468 181466 10 LAAVDATVNQVLASR Unmodified 1526.8417 0.84165545 2496 Q15084 PDIA6 Protein disulfide-isomerase A6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 2 2 2 1 1 2 2 1 1 1 2 79.865 79.928 2;3 2.8422E-41 92371 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 160.15 124.19 202000000 0 0 0 3402800 7602900 16058000 11201000 12017000 8815400 26662000 23222000 24988000 6625000 17188000 44217000 27123 2496 24767 228280;228281;228282;228283;228284;228285;228286;228287;228288;228289;228290;228291;228292;228293;228294;228295;228296;228297 181469;181470;181471;181472;181473;181474;181475;181476;181477;181478;181479;181480;181481;181482 181470 14 LAAVDVSAR Unmodified 900.50288 0.50288033 1802 P58107 EPPK1 Epiplakin yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 35.763 35.965 2 0.0078297 39985 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 71.379 21.253 58021000 0 0 0 0 0 7411100 7562800 10854000 5351000 7337800 7348200 0 7372700 4783800 0 27124 1802 24768 228298;228299;228300;228301;228302;228303;228304;228305 181483;181484;181485 181483 3 LAAVTYNGVDNNK Unmodified 1377.6888 0.6888432 2596 Q16181 SEPT7 Septin-7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 41.275 40.712 2 2.3458E-13 51113 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 137.98 85.26 310350000 0 142880000 0 7177300 9027600 10823000 10312000 9368300 7548500 20683000 33793000 19732000 11993000 10503000 16503000 27125 2596 24769 228306;228307;228308;228309;228310;228311;228312;228313;228314;228315;228316;228317;228318;228319 181486;181487;181488;181489;181490;181491;181492;181493;181494;181495;181496;181497;181498;181499;181500 181489 15 LAAVVSACK Unmodified 917.50044 0.50043749 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 29.813 29.858 2 0.0069711 32093 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 73.665 45.558 52799000 0 0 0 0 4755100 8104600 0 0 9517900 9474800 0 0 20946000 0 0 27126 1986 24770 228320;228321;228322;228323;228324 181501;181502 181502 2 LACDVDQVTR Unmodified 1175.5605 0.56047157 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 33.658 34.022 2 0.0027225 37259 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 80.755 50.068 141370000 0 0 0 0 0 0 0 16447000 6464500 20902000 0 28836000 16748000 18890000 33085000 27127 1986 24771 228325;228326;228327;228328;228329;228330;228331;228332;228333;228334;228335 181503;181504;181505;181506;181507;181508;181509;181510;181511 181509 8 LACGVIGIAQ Unmodified 1000.5376 0.53755128 725 P00441 SOD1 Superoxide dismutase [Cu-Zn] yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.942 71.016 2 0.01956 80702 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.743 30.967 444850000 0 0 0 11673000 5707300 5057700 4361200 2434300 2480000 7828300 70111000 75242000 4208700 64102000 191650000 27128 725 24772 228336;228337;228338;228339;228340;228341;228342;228343;228344;228345;228346;228347 181512;181513;181514 181512 2 LACLSEEGNEIESGK Unmodified 1634.7458 0.74576573 5110 Q9Y2L1 DIS3 Exosome complex exonuclease RRP44 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 50.542 50.823 2 3.0055E-14 56457 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 132.32 119.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27129 5110 24773 228348;228349;228350 181515;181516;181517 181517 3 LADALQELR Unmodified 1027.5662 0.56620887 757 P02545 LMNA Prelamin-A/C;Lamin-A/C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.022 61.126 2 2.035E-64 68772 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 201.97 60.19 1252800000 0 0 0 121940000 52207000 79516000 64172000 141370000 35007000 104060000 143260000 114910000 77778000 98713000 219820000 27130 757 24774 228351;228352;228353;228354;228355;228356;228357;228358;228359;228360;228361;228362 181518;181519;181520;181521;181522;181523;181524;181525;181526;181527;181528;181529;181530;181531 181521 14 LADDLSTLQEK Unmodified 1231.6296 0.62959699 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 51.981 51.709 2 9.8411E-06 57972 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 163.16 117.48 223200000 0 3663600 0 15422000 15930000 20223000 16906000 12510000 0 20391000 23232000 25089000 26836000 15817000 27177000 27131 2459 24775 228363;228364;228365;228366;228367;228368;228369;228370;228371;228372;228373;228374;228375 181532;181533;181534;181535;181536;181537;181538;181539 181539 7 LADDSEPTVR Unmodified 1101.5302 0.5302173 3524 Q8TF05 PPP4R1 Serine/threonine-protein phosphatase 4 regulatory subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 23.813 24.31 2 0.009388 24649 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.859 33.704 25406000 0 0 0 0 0 0 0 3768700 0 0 6896500 7333800 0 0 7406800 27132 3524 24776 228376;228377;228378;228379 181540;181541;181542 181540 3 LADDVDLEQVANETHGHVGADLAALCSEAALQAIRK Unmodified 3799.8799 0.87991481 1755 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 0 1 By MS/MS By MS/MS 2 0.707 1 2 1 3 1 98.197 94.641 4;5 1.9043E-60 95768 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 94.642 86.376 180190000 177210000 2979300 0 0 0 0 0 0 0 0 0 0 0 0 0 27133 1755 24777 228380;228381;228382;228383 181543;181544;181545;181546;181547 181544 5 LADFGLAR Unmodified 861.47085 0.47085192 4752;822;1637;1180;2037;2132;956;2360;2036;2035 P06493;Q96Q40;O94921;P50750;Q9NYV4;Q00536;Q07002;P24941;P11802;Q00535;Q00534;Q14004 CDK1;CDK15;CDK14;CDK9;CDK12;CDK16;CDK18;CDK2;CDK4;CDK5;CDK6;CDK13 Cyclin-dependent kinase 1;Cyclin-dependent kinase 15;Cyclin-dependent kinase 14;Cyclin-dependent kinase 9;Cyclin-dependent kinase 12;Cyclin-dependent kinase 16;Cyclin-dependent kinase 18;Cyclin-dependent kinase 2;Cyclin-dependent kinase 4;Cyclin-dependent-like kinase 5;Cyclin-dependent kinase 6;Cyclin-dependent kinase 13 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 1 2 2 2 2 2 2 2 2 2 2 56.451 56.642 2 0.00046967 64341 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 151.17 0 2827100000 0 0 0 151380000 186970000 264610000 228580000 173730000 175810000 242370000 272480000 342400000 218400000 187690000 382650000 27134 822;1637;4752;2037;2132;1180;956;2036;2035;2360 24778 228384;228385;228386;228387;228388;228389;228390;228391;228392;228393;228394;228395;228396;228397;228398;228399;228400;228401;228402;228403;228404;228405 181548;181549;181550;181551;181552;181553;181554;181555;181556;181557;181558;181559;181560;181561;181562;181563 181552 15 LADFGSCLK Unmodified 1009.4903 0.49026674 5247;2809 Q9Y5S2;Q09013;Q5VT25 CDC42BPB;DMPK;CDC42BPA Serine/threonine-protein kinase MRCK beta;Myotonin-protein kinase;Serine/threonine-protein kinase MRCK alpha no no 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 53.066 53.413 2 0.03575 60548 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 45.972 22.449 50529000 0 0 0 0 0 0 0 0 0 16904000 0 0 0 13876000 19749000 27135 5247;2809 24779 228406;228407;228408 181564;181565 181564 2 LADFGTCMK Oxidation (M) 1057.4573 0.45725205 455;2296 O75116;Q13464 ROCK2;ROCK1 Rho-associated protein kinase 2;Rho-associated protein kinase 1 no no 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 36.399 31.503 2 0.00030711 41033 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.52 87.304 78018000 4926100 67572000 5519800 0 0 0 0 0 0 0 0 0 0 0 0 27136 455;2296 24780 228409;228410;228411 181566;181567;181568 181567 576 3 LADFGVAGQLTDTMAK Oxidation (M) 1652.808 0.80797206 2250;2227 Q13188;Q13043 STK3;STK4 Serine/threonine-protein kinase 3;Serine/threonine-protein kinase 3 36kDa subunit;Serine/threonine-protein kinase 3 20kDa subunit;Serine/threonine-protein kinase 4;Serine/threonine-protein kinase 4 37kDa subunit;Serine/threonine-protein kinase 4 18kDa subunit no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.71 3.81 2 1 4 2 1 1 1 1 1 75.636 73.536 2 1.7198E-10 84697 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.766 79.608 336530000 0 312980000 6528000 0 0 0 0 0 0 0 0 0 0 7889100 9140700 27137 2250;2227 24781 228412;228413;228414;228415;228416;228417;228418 181569;181570;181571;181572;181573;181574 181570 3618 6 LADFGVAGQLTDTQIK Unmodified 1675.8781 0.87810054 4811;5279 Q9P289;Q9Y6E0 STK26;STK24 Serine/threonine-protein kinase 26;Serine/threonine-protein kinase 24;Serine/threonine-protein kinase 24 36 kDa subunit;Serine/threonine-protein kinase 24 12 kDa subunit no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.11 2.47 6 2 1 4 3 1 1 82.281 78.402 2 3.5742E-40 98011 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 188.26 157.39 3105800000 78612000 2808300000 59667000 0 0 0 0 0 0 0 0 0 0 0 159270000 27138 4811;5279 24782 228419;228420;228421;228422;228423;228424;228425;228426;228427 181575;181576;181577;181578;181579;181580;181581;181582 181575 7 LADFGVLHR Unmodified 1026.5611 0.56106391 1209 P26639 TARS Threonine--tRNA ligase, cytoplasmic yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 2 1 56.56 56.952 2 0.010514 63843 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.207 30.204 57863000 0 0 0 0 0 0 0 0 0 0 7751600 8334000 0 11817000 29960000 27139 1209 24783 228428;228429;228430;228431;228432 181583;181584;181585 181583 3 LADFGVSAK Unmodified 906.48108 0.48108226 4365;586 Q9H2G2;O94804 SLK;STK10 STE20-like serine/threonine-protein kinase;Serine/threonine-protein kinase 10 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 45.265 44.522 1;2 0.0054364 50483 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 77.732 25.049 202290000 0 52316000 0 0 11147000 18462000 0 10189000 0 18551000 20441000 18183000 13788000 12907000 26308000 27140 4365;586 24784 228433;228434;228435;228436;228437;228438;228439;228440;228441;228442;228443;228444 181586;181587;181588;181589;181590;181591;181592;181593;181594;181595;181596;181597;181598 181587 13 LADFGVSGELTASVAKR Unmodified 1719.9155 0.91554867 2198 Q12851 MAP4K2 Mitogen-activated protein kinase kinase kinase kinase 2 yes yes 0 0 1 By matching By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 56.736 57.009 4 0.012154 64294 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 15.635 2.217 43432000 0 0 0 0 0 8486700 0 0 0 7826400 5689200 11443000 0 9986200 0 27141 2198 24785 228445;228446;228447;228448;228449 181599 181599 1 LADGGATNQGR Unmodified 1058.5105 0.51048491 2157 Q08380 LGALS3BP Galectin-3-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 7.4948 7.6207 2 0.00017439 6126 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 111.46 58.819 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27142 2157 24786 228450;228451;228452;228453 181600;181601;181602;181603 181603 4 LADGRQASVTLQPLK Unmodified 1595.8995 0.89950468 1975 P78345 RPP38 Ribonuclease P protein subunit p38 yes yes 0 0 1 By MS/MS 2 0 1 1 63.562 55.293 3 0.0044862 74523 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.09 34.512 20397000 20397000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27143 1975 24787 228454 181604;181605 181604 2 LADHFGGK Unmodified 843.4239 0.42390173 5141;4557 Q9Y383;Q9NQ29 LUC7L2;LUC7L Putative RNA-binding protein Luc7-like 2;Putative RNA-binding protein Luc7-like 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 15.476 15.685 2 0.0085533 15376 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 85.813 63.19 255900000 0 0 0 0 0 0 28582000 23629000 0 46621000 0 52567000 52016000 52482000 0 27144 5141;4557 24788 228455;228456;228457;228458;228459;228460 181606;181607;181608 181608 3 LADILSPR Unmodified 883.51272 0.51271674 3947 Q96PE2 ARHGEF17 Rho guanine nucleotide exchange factor 17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.484 41.661 2 0.03661 46627 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 51.787 7.0203 128120000 0 0 0 5630900 4782400 9013700 4454400 5182800 4941100 8416400 7527300 9306400 7098000 5964100 55806000 27145 3947 24789 228461;228462;228463;228464;228465;228466;228467;228468;228469;228470;228471;228472 181609 181609 1 LADINGPAK Unmodified 897.49198 0.4919813 2406 Q14432;Q13370 PDE3A;PDE3B cGMP-inhibited 3',5'-cyclic phosphodiesterase A;cGMP-inhibited 3',5'-cyclic phosphodiesterase B yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 26.912 25.968 2 1.825E-05 28325 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 133.81 65.328 499240000 7656700 129520000 3030900 21983000 24485000 35347000 29282000 23322000 17937000 32451000 37286000 39391000 34986000 29289000 33272000 27146 2406 24790 228473;228474;228475;228476;228477;228478;228479;228480;228481;228482;228483;228484;228485;228486;228487;228488 181610;181611;181612;181613;181614;181615;181616;181617;181618;181619;181620;181621;181622;181623;181624;181625;181626 181612 15 LADINYEGR Unmodified 1049.5142 0.5141733 1707 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 39.752 39.88 2 0.00037755 43842 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 147.19 97.058 185700000 0 0 0 13861000 10357000 14991000 14995000 16083000 9515200 21181000 16814000 33866000 19451000 14584000 0 27147 1707 24791 228489;228490;228491;228492;228493;228494;228495;228496;228497;228498;228499 181627;181628;181629;181630;181631;181632;181633;181634;181635;181636;181637;181638;181639 181637 13 LADINYEGRLEAVSRK Unmodified 1832.9745 0.97446054 1707 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 58.227 58.51 4 0.014755 65750 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.947 22.474 25195000 0 0 0 0 0 0 0 3022900 3766000 0 0 0 0 4692800 13713000 27148 1707 24792 228500;228501;228502;228503 181640 181640 1 LADIQIEQLNR Unmodified 1311.7147 0.71466402 446 O60925 PFDN1 Prefoldin subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 69.408 68.757 2 1.9307E-05 78084 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 150.27 127.55 227080000 0 27196000 0 0 0 5614600 0 6238800 4265000 11352000 37577000 31759000 6217300 25197000 71667000 27149 446 24793 228504;228505;228506;228507;228508;228509;228510;228511;228512;228513;228514;228515;228516;228517 181641;181642;181643;181644;181645;181646;181647;181648;181649;181650;181651;181652;181653 181645 13 LADIQIEQLNRTK Unmodified 1540.8573 0.85730551 446 O60925 PFDN1 Prefoldin subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 2 2 2 67.54 61.759 2;3 1.6105E-08 76503 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 130.01 103.96 267400000 53370000 106430000 107600000 0 0 0 0 0 0 0 0 0 0 0 0 27150 446 24794 228518;228519;228520;228521;228522;228523 181654;181655;181656;181657;181658 181658 4 LADISLGK Unmodified 815.47527 0.4752686 2075 Q02413 DSG1 Desmoglein-1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 47.731 47.839 2 0.034963 54171 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 52.786 5.7917 67579000 0 0 0 0 26560000 0 0 0 0 0 0 41020000 0 0 0 27151 2075 24795 228524;228525 181659;181660 181660 2 LADIVVPR Unmodified 881.53345 0.53345218 4710 Q9NWZ5 UCKL1 Uridine-cytidine kinase-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.129 58.244 2 0.0087129 66438 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 85.265 58.303 113400000 0 0 0 5973500 5918600 8414600 9827700 7046600 5367200 11089000 13872000 12828000 11716000 8619200 12726000 27152 4710 24796 228526;228527;228528;228529;228530;228531;228532;228533;228534;228535;228536;228537 181661;181662;181663;181664;181665;181666;181667;181668;181669;181670;181671 181667 11 LADLEALK Unmodified 871.50148 0.50148335 540 O75792 RNASEH2A Ribonuclease H2 subunit A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.736 55.866 2 0.01701 63057 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 66.351 10.337 261330000 0 0 0 12528000 12621000 21084000 19319000 18507000 12767000 32082000 25439000 29112000 21431000 19014000 37430000 27153 540 24797 228538;228539;228540;228541;228542;228543;228544;228545;228546;228547;228548;228549 181672;181673;181674;181675;181676;181677;181678;181679;181680 181675 7 LADLQVPR Unmodified 910.52362 0.52361577 2374 Q14145 KEAP1 Kelch-like ECH-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.455 52.598 2 0.0052859 58318 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.43 49.966 72777000 0 0 0 3783100 4474000 4449400 4513300 5554300 2739300 6655700 7990800 9896500 7624500 5838500 9257700 27154 2374 24798 228550;228551;228552;228553;228554;228555;228556;228557;228558;228559;228560;228561 181681;181682;181683;181684;181685;181686;181687;181688;181689;181690;181691;181692;181693 181684 13 LADLVER Unmodified 814.45487 0.45486751 585 O94788 ALDH1A2 Retinal dehydrogenase 2 yes yes 0 0 0 By MS/MS 10 0 1 1 59.092 59.265 2 0.029815 67422 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 75.311 0 10297000 0 0 0 0 0 0 0 10297000 0 0 0 0 0 0 0 27155 585 24799 228562 181694 181694 1 LADMGIAIR Oxidation (M) 974.5219 0.52190122 5168 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 46.159 46.321 2 0.0023276 52017 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 89.752 45.06 274390000 0 0 0 23173000 22484000 20767000 24389000 29282000 19224000 27138000 27588000 29473000 26446000 0 24425000 27156 5168 24800 228563;228564;228565;228566;228567;228568;228569;228570;228571;228572;228573 181695;181696;181697;181698;181699;181700;181701;181702;181703;181704;181705;181706;181707 181704 6543 13 LADMGIAIR Unmodified 958.52699 0.52698659 5168 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.886 64.974 2 0.0035515 74180 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 108.46 69.669 260440000 0 0 0 14928000 13650000 18126000 17537000 17887000 15070000 25802000 23621000 27396000 20398000 21433000 44592000 27157 5168 24800 228574;228575;228576;228577;228578;228579;228580;228581;228582;228583;228584;228585 181708;181709;181710;181711;181712;181713;181714;181715;181716;181717;181718;181719 181713 12 LADMGIAIRVASPK Unmodified 1440.8123 0.81226958 5168 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog yes yes 0 0 1 By MS/MS 2 0 1 1 80.307 72.176 3 0.006373 94733 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.332 34.483 11740000 11740000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27158 5168 24801 228586 181720 181720 1 LADMHSTEISLQQR Oxidation (M) 1643.7937 0.79371898 533 O75694 NUP155 Nuclear pore complex protein Nup155 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 39.712 39.805 3 0.0022123 44403 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 42.388 35.498 21515000 0 0 0 6173300 0 7149100 0 0 0 0 0 8192500 0 0 0 27159 533 24802 228587;228588;228589 181721 181721 697 1 LADMHSTEISLQQR Unmodified 1627.7988 0.79880436 533 O75694 NUP155 Nuclear pore complex protein Nup155 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 51.814 51.81 3 1.624E-05 58796 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 62.081 54.402 127320000 0 0 0 9079700 9091000 15207000 10070000 20621000 8963300 20041000 0 0 14174000 20074000 0 27160 533 24802 228590;228591;228592;228593;228594;228595;228596;228597;228598;228599 181722;181723;181724;181725;181726;181727;181728;181729;181730;181731;181732;181733;181734;181735;181736 181726 15 LADPEVLK Unmodified 883.50148 0.50148335 675 O95628 CNOT4 CCR4-NOT transcription complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 43.496 43.663 2 0.015495 48434 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 68.787 40.364 139150000 0 0 0 7327500 6547900 8945100 11781000 6629500 8807500 12523000 15952000 14919000 12315000 0 33400000 27161 675 24803 228600;228601;228602;228603;228604;228605;228606;228607;228608;228609;228610 181737;181738;181739;181740;181741;181742 181741 6 LADPVPSGGSSSPR Unmodified 1325.6575 0.65754307 3800 Q96DN6 MBD6 Methyl-CpG-binding domain protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 36.413 36.519 2 0.0031338 40888 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 48.981 30.669 16742000 0 0 0 0 2329300 0 2568300 3095800 0 0 4584500 0 0 4164400 0 27162 3800 24804 228611;228612;228613;228614;228615 181743;181744;181745;181746;181747;181748 181748 6 LADPVTPVETILQR Unmodified 1550.8668 0.86680757 4674 Q9NVN8 GNL3L Guanine nucleotide-binding protein-like 3-like protein yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 85.252 85.353 2 1.0247E-06 98973 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 91.313 80.988 81920000 0 0 0 0 5742500 6472500 5923900 8286800 5373300 11222000 9608900 15390000 7309400 6590900 0 27163 4674 24805 228616;228617;228618;228619;228620;228621;228622;228623;228624;228625 181749;181750;181751;181752;181753;181754;181755;181756 181753 8 LADQIFAYYK Unmodified 1230.6285 0.62847478 3050 Q7L576;Q96F07 CYFIP1;CYFIP2 Cytoplasmic FMR1-interacting protein 1;Cytoplasmic FMR1-interacting protein 2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.23 3.24 2 1 10 2 1 1 1 1 1 1 1 1 1 1 1 78.571 77.563 2 6.5749E-06 95872 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.69 98.369 95589000 0 38241000 3806900 3479500 0 0 4056000 5879500 0 9512500 6603500 0 3338900 0 20671000 27164 3050 24806 228626;228627;228628;228629;228630;228631;228632;228633;228634;228635;228636;228637;228638 181757;181758;181759;181760;181761;181762;181763;181764;181765;181766;181767;181768 181758 12 LADQPLTPK Unmodified 981.5495 0.54949617 3986 Q96S82 UBL7 Ubiquitin-like protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 33.192 32.758 2 0.0010459 41419 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 141.2 119.9 350790000 0 279430000 4651100 0 1983800 6164200 4327000 3320700 2058800 8776300 7447300 7392300 5921800 6057500 13263000 27165 3986 24807 228639;228640;228641;228642;228643;228644;228645;228646;228647;228648;228649;228650;228651 181769;181770;181771;181772;181773;181774;181775;181776;181777;181778;181779;181780 181774 12 LADSGDGAGPSPEEK Unmodified 1428.6369 0.63686721 3686 Q92917 GPKOW G patch domain and KOW motifs-containing protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.64 19.841 2 1.0086E-30 20150 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 147.24 134.67 486800000 0 0 0 37915000 28395000 33191000 36623000 24788000 28538000 44240000 47990000 54794000 42731000 30220000 77377000 27166 3686 24808 228652;228653;228654;228655;228656;228657;228658;228659;228660;228661;228662;228663 181781;181782;181783;181784;181785;181786;181787;181788;181789;181790;181791 181782 11 LADSPPPQVWQLISK Unmodified 1677.909 0.90900673 948 P11441 UBL4A Ubiquitin-like protein 4A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 88.505 88.613 2 0.0012981 102649 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 48.004 39.491 49469000 0 0 0 0 2913200 3657100 2376800 4466800 3177100 5461900 5046900 5912800 2511300 3171700 10773000 27167 948 24809 228664;228665;228666;228667;228668;228669;228670;228671;228672;228673;228674 181792;181793;181794;181795;181796;181797 181792 6 LADVAPTPPK Unmodified 1007.5651 0.56514624 5015 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 39.425 39.401 2 0.011165 43693 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 54.722 37.357 22718000 0 0 0 3945600 2982300 0 4393800 0 3609200 0 0 0 4568200 3218700 0 27168 5015 24810 228675;228676;228677;228678;228679;228680 181798;181799;181800;181801;181802;181803 181801 6 LADVGGDLK Unmodified 886.476 0.47599688 5023 Q9UMZ2 SYNRG Synergin gamma yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 6 4 2 2 1 1 1 1 37.468 34.74 2 0.021614 44620 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.442 40.461 73694000 1724300 56198000 0 0 0 0 4735300 0 0 0 0 0 0 0 11037000 27169 5023 24811 228681;228682;228683;228684 181804;181805 181804 1 LADVPGEILK Unmodified 1053.607 0.60701105 1106 P20585 MSH3 DNA mismatch repair protein Msh3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 68.696 68.373 2 0.0061036 78560 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 66.27 47.495 210150000 0 136970000 0 2757000 3489500 7840300 4184500 4597800 4797100 8956700 6867100 5847700 8201700 6474500 9159700 27170 1106 24812 228685;228686;228687;228688;228689;228690;228691;228692;228693;228694;228695;228696;228697 181806;181807;181808;181809;181810;181811;181812;181813;181814;181815 181814 10 LAEAAVAEK Unmodified 900.49165 0.49164694 3315 Q8N201 INTS1 Integrator complex subunit 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.779 20.983 2 0.0052791 21615 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 78.149 22.027 126960000 0 0 0 8964500 6669000 8106700 7068600 7921900 6534900 11767000 10455000 15760000 15540000 12530000 15638000 27171 3315 24813 228698;228699;228700;228701;228702;228703;228704;228705;228706;228707;228708;228709 181816;181817;181818;181819;181820;181821;181822;181823;181824;181825 181817 10 LAEAEETAR Unmodified 988.48254 0.48253882 3308 Q8N163 CCAR2 Cell cycle and apoptosis regulator protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.267 13.421 2 0.0031256 12648 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 91.069 54.368 377670000 0 0 0 21170000 22763000 32917000 27511000 20877000 19938000 32036000 32842000 37789000 42879000 36336000 50617000 27172 3308 24814 228710;228711;228712;228713;228714;228715;228716;228717;228718;228719;228720;228721 181826;181827;181828;181829;181830;181831;181832;181833;181834;181835;181836;181837;181838 181826 12 LAEAFAEELHER Unmodified 1413.6888 0.6888432 4049 Q99707 MTR Methionine synthase yes yes 0 0 0 By MS/MS 10 0 1 1 59.783 60.369 3 0.041494 68202 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.195 21.732 9182300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9182300 27173 4049 24815 228722 181839 181839 0 LAEAGETGRIILPNVNSDSVHTK Unmodified 2420.266 0.26595111 2561 Q15652 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C yes yes 0 0 1 By MS/MS 2 0 1 1 75.621 67.49 4 0.042214 89167 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 22.886 11.883 6392100 6392100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27174 2561 24816 228723 181840 181840 1 LAEAHQQECCQK Unmodified 1500.6449 0.64494625 5254 Q9Y5X3 SNX5 Sorting nexin-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 7.7779 4.6932 3 1.9103E-06 6639 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 112.13 95.593 252720000 14227000 232230000 6268600 0 0 0 0 0 0 0 0 0 0 0 0 27175 5254 24817 228724;228725;228726;228727 181841;181842;181843 181843 3 LAEALYIADRK Unmodified 1261.703 0.7030367 2320 Q13573 SNW1 SNW domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.04 2.54 2 1 21 1 2 1 1 2 2 2 2 2 2 1 2 2 2 52.834 52.481 2;3 0.00016166 58801 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 111.61 58.44 445220000 0 5421900 20353000 13735000 13309000 41009000 28789000 23835000 33554000 40041000 47954000 55098000 26671000 24520000 70931000 27176 2320 24818 228728;228729;228730;228731;228732;228733;228734;228735;228736;228737;228738;228739;228740;228741;228742;228743;228744;228745;228746;228747;228748;228749;228750;228751 181844;181845;181846;181847;181848;181849;181850;181851;181852;181853;181854 181851 7 LAEANLLLAQNR Unmodified 1324.7463 0.7462985 2763 Q5SXM2 SNAPC4 snRNA-activating protein complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.518 70.565 2 1.8029E-06 81411 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 114.5 77.152 48799000 0 0 0 3744600 3678700 4319600 3877500 4572600 2203700 5581500 6054900 0 4306800 3872300 6587100 27177 2763 24819 228752;228753;228754;228755;228756;228757;228758;228759;228760;228761;228762;228763 181855;181856;181857;181858;181859;181860;181861;181862;181863;181864;181865 181863 11 LAEAPSAQPNQTQEK Unmodified 1610.79 0.79001381 2594 Q15911 ZFHX3 Zinc finger homeobox protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.219 24.381 2 2.2993E-05 25259 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 86.014 69.761 98647000 0 0 0 7301400 5672900 7496800 9121600 7054000 8110600 8763100 11408000 0 11267000 7822500 14629000 27178 2594 24820 228764;228765;228766;228767;228768;228769;228770;228771;228772;228773;228774;228775 181866;181867;181868;181869;181870;181871;181872;181873;181874;181875;181876 181874 11 LAEAPSPAPTPSPTPVEDLGPQTSTSPGR Unmodified 2856.4141 0.41413149 2381 Q14160 SCRIB Protein scribble homolog yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 74.534 74.337 3 1.3165E-31 85715 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 78.752 72.848 36972000 0 0 0 4520200 10098000 12691000 9662200 0 0 0 0 0 0 0 0 27179 2381 24821 228776;228777;228778;228779 181877;181878 181877 2 LAEAQIEELRQK Unmodified 1426.778 0.77799256 4587 Q9NR28 DIABLO Diablo homolog, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.87 3 5 1 1 1 1 1 1 1 1 51.129 49.058 3 0.00010667 62114 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 85.522 64.221 215040000 13266000 68116000 84889000 0 0 5665100 0 3503600 0 11370000 0 0 0 11233000 16996000 27180 4587 24822 228780;228781;228782;228783;228784;228785;228786;228787 181879;181880;181881;181882;181883;181884;181885 181884 7 LAEARLAAK Unmodified 941.56581 0.56581494 2661 Q32MZ4 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 23.776 19.805 2 0.015226 28080 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 109.48 38.183 285220000 281490000 0 3723700 0 0 0 0 0 0 0 0 0 0 0 0 27181 2661 24823 228788;228789 181886 181886 0 LAEAVQER Unmodified 914.48214 0.48214489 3361 Q8N6R0 METTL13 Methyltransferase-like protein 13 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 17.4 17.556 2 0.01042 16309 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.713 10.926 132330000 0 0 0 9087200 8270600 12114000 10913000 8343300 8407200 13415000 0 19164000 12174000 11921000 18524000 27182 3361 24824 228790;228791;228792;228793;228794;228795;228796;228797;228798;228799;228800 181887;181888;181889 181888 3 LAEDAPNFDGPAAEGQPGQK Unmodified 2010.9283 0.9282982 1974 P78344 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 1 2 2 2 2 2 2 2 2 2 2 54.193 54.354 2;3 1.9646E-21 62086 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 135.81 124.2 2696800000 0 0 0 114390000 105700000 179450000 174620000 237310000 149930000 263120000 343560000 291800000 242260000 228680000 366020000 27183 1974 24825 228801;228802;228803;228804;228805;228806;228807;228808;228809;228810;228811;228812;228813;228814;228815;228816;228817;228818;228819;228820;228821;228822;228823 181890;181891;181892;181893;181894;181895;181896;181897;181898;181899;181900;181901;181902;181903;181904;181905;181906;181907;181908;181909;181910;181911;181912;181913 181912 21 LAEDEAFQR Unmodified 1077.5091 0.50908792 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 34.691 35.01 2 0.0036184 38461 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 109.86 78.789 56524000 0 0 0 0 0 7542700 5412700 0 0 0 11135000 18628000 13806000 0 0 27184 2501 24826 228824;228825;228826;228827;228828;228829;228830 181914;181915;181916;181917;181918;181919;181920 181916 7 LAEDEAFQRR Unmodified 1233.6102 0.61019895 2501 Q15149 PLEC Plectin yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 28.862 29.129 3 0.010125 31522 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 42.718 27.178 102450000 0 0 0 17902000 0 0 7909800 9953700 0 14930000 0 12159000 14733000 9624900 15241000 27185 2501 24827 228831;228832;228833;228834;228835;228836;228837;228838 181921;181922;181923;181924 181921 2 LAEDILNTMFDTSYSK Oxidation (M) 1862.8608 0.86079549 2228 Q13045 FLII Protein flightless-1 homolog yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 79.604 79.761 2 2.3179E-06 92313 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 81.92 65.666 12852000 0 0 0 0 0 0 0 0 2562500 5508300 4781400 0 0 0 0 27186 2228 24828 228839;228840;228841;228842 181925;181926;181927 181926 3619 3 LAEDILNTMFDTSYSK Unmodified 1846.8659 0.86588087 2228 Q13045 FLII Protein flightless-1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.8 3.12 3 1 1 1 2 1 1 93.852 90.134 2 1.7901E-73 112592 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 263.44 247.31 198680000 7040800 186020000 3216700 0 0 0 0 0 0 0 0 0 0 0 2398900 27187 2228 24828 228843;228844;228845;228846;228847 181928;181929;181930;181931 181928 3 LAEDLPPNTLDELIDELGGPENVAEMTGRK Unmodified 3235.5918 0.59183786 17 A3KN83 SBNO1 Protein strawberry notch homolog 1 yes yes 0 0 1 By MS/MS 2 0 1 1 99.985 91.855 3 0.00012541 118368 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 37.678 27.349 13130000 13130000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27188 17 24829 228848 181932 181932 1 LAEDVVTFQTLPPQR Unmodified 1712.9097 0.90973501 4491 Q9HAV4 XPO5 Exportin-5 yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 78.306 78.344 2 0.00011225 90721 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 88.441 73.239 64524000 0 0 0 3072900 4019600 7873500 0 4039100 0 9916800 5409800 8165300 5125500 6540400 10362000 27189 4491 24830 228849;228850;228851;228852;228853;228854;228855;228856;228857;228858 181933;181934;181935;181936;181937 181936 3 LAEEEDLFDSAHPEEGDLDLASESTAHAQSSK Unmodified 3427.5175 0.51754652 2532;2377 Q15424;Q14151 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.67 3.89 4 1 4 3 2 1 1 1 1 78.457 76.554 3;4 9.2424E-51 92989 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 100.68 94.775 264030000 0 153190000 70495000 0 0 0 0 0 0 8774300 10257000 5719800 0 0 15595000 27190 2532;2377 24831 228859;228860;228861;228862;228863;228864;228865;228866;228867 181938;181939;181940;181941;181942;181943;181944;181945;181946 181945 9 LAEEFFLSTEGTVLGLDLSGDPTVGQAK Unmodified 2893.4597 0.4596847 2870 Q6DHV7 ADAL Adenosine deaminase-like protein yes yes 0 0 0 By MS/MS 2 0 1 1 99.578 91.448 3 5.5656E-06 117890 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 29.154 23.251 4443000 4443000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27191 2870 24832 228868 181947 181947 1 LAEEIEK Unmodified 830.43855 0.43854874 479 O75334 PPFIA2 Liprin-alpha-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 23.739 23.9 2 0.026086 25183 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 79.451 13.022 389930000 0 0 0 0 68519000 55712000 73355000 0 57677000 111430000 0 0 662190 6343600 16227000 27192 479 24833 228869;228870;228871;228872;228873;228874;228875;228876 181948 181948 1 LAEEIPLK Unmodified 911.53278 0.53278348 5290 Q9Y6M1 IGF2BP2 Insulin-like growth factor 2 mRNA-binding protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 59.475 53.633 2 0.0125 69043 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.375 14.459 25552000 0 25552000 0 0 0 0 0 0 0 0 0 0 0 0 0 27193 5290 24834 228877 181949 181949 1 LAEEIPNPSNK Unmodified 1210.6194 0.61936665 591 O94829 IPO13 Importin-13 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 46.651 41.441 2 0.009322 54165 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.688 69.537 41755000 0 41755000 0 0 0 0 0 0 0 0 0 0 0 0 0 27194 591 24835 228878;228879 181950 181950 1 LAEELGRSRDEVTSHQK Unmodified 1953.9868 0.98681614 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 0 2 By MS/MS 2 0 1 1 35.865 29.518 4 0.020387 41271 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 21.233 6.311 36379000 36379000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27195 1286 24836 228880 181951 181951 1 LAEEQLR Unmodified 857.46068 0.46068117 4695 Q9NWB6 ARGLU1 Arginine and glutamate-rich protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 23.074 23.353 2 0.020936 23976 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 119.22 35.196 389440000 0 0 0 27519000 0 0 33747000 29117000 22221000 34341000 54246000 65986000 41597000 33213000 47450000 27196 4695 24837 228881;228882;228883;228884;228885;228886;228887;228888;228889;228890 181952;181953;181954 181953 1 LAEEVPPPPEGLIPAPPVPETTPTPPTK Unmodified 2870.5317 0.53172743 266 O15234 CASC3 Protein CASC3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 89.068 89.177 3 7.5369E-11 103283 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.307 39.873 56131000 0 0 0 0 4184800 3701800 3367300 4949900 3012500 7462100 5994700 7399800 3729800 3699700 8629200 27197 266 24838 228891;228892;228893;228894;228895;228896;228897;228898;228899;228900;228901 181955;181956;181957;181958;181959;181960;181961;181962;181963;181964;181965;181966;181967;181968;181969;181970 181959 16 LAEFQTDSQGK Unmodified 1222.583 0.58298115 3136 Q86TI2 DPP9 Dipeptidyl peptidase 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 7.44 3.62 2 1 6 1 2 1 1 1 1 1 1 31.517 29.727 2 2.8609E-05 37749 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.17 89.563 300790000 9161800 260420000 0 0 0 5085100 2649900 0 2615300 0 0 0 0 5332300 15523000 27198 3136 24839 228902;228903;228904;228905;228906;228907;228908;228909;228910 181971;181972;181973;181974;181975;181976 181971 6 LAEGEQILSGGVFNK Unmodified 1560.8148 0.814772 1273 P30260 CDC27 Cell division cycle protein 27 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 78.291 77.163 2 9.3331E-40 95386 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 174.24 124.94 628240000 8564400 251890000 7170400 12357000 19975000 30400000 19063000 25965000 21751000 45846000 30350000 41489000 31888000 35885000 45645000 27199 1273 24840 228911;228912;228913;228914;228915;228916;228917;228918;228919;228920;228921;228922;228923;228924;228925;228926 181977;181978;181979;181980;181981;181982;181983;181984;181985;181986;181987;181988;181989;181990;181991;181992;181993;181994;181995 181981 19 LAEGLDIQLK Unmodified 1098.6285 0.62847478 3387 Q8NB78 KDM1B Lysine-specific histone demethylase 1B yes yes 0 0 0 By MS/MS 2 0 1 1 78.184 73.408 2 0.015808 91550 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.016 44.997 38031000 0 38031000 0 0 0 0 0 0 0 0 0 0 0 0 0 27200 3387 24841 228927 181996 181996 1 LAEGSAYEEVPTSMMYSENDISNSIK Unmodified 2864.2732 0.27320584 1083 P19174 PLCG1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 yes yes 0 0 0 By MS/MS 2 0 1 1 87.121 82.312 3 1.2312E-78 102267 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.34 133.35 123420000 0 123420000 0 0 0 0 0 0 0 0 0 0 0 0 0 27201 1083 24842 228928 181997 181997 1 LAEGVLDVK Unmodified 942.5386 0.53859714 2800 Q5THK1 PRR14L Protein PRR14L yes yes 0 0 0 By MS/MS 2 0 1 1 59.253 53.411 2 0.036336 68720 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.969 20.134 22503000 0 22503000 0 0 0 0 0 0 0 0 0 0 0 0 0 27202 2800 24843 228929 181998 181998 1 LAEGVQLLCLIDK Unmodified 1470.8116 0.81160087 4266 Q9BZH6 WDR11 WD repeat-containing protein 11 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 96.084 92.45 2 3.769E-10 114523 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.86 96.861 19659000 0 19198000 460700 0 0 0 0 0 0 0 0 0 0 0 0 27203 4266 24844 228930;228931 181999 181999 1 LAEHIEHEQQK Unmodified 1360.6735 0.67352749 1125 P21359 NF1 Neurofibromin;Neurofibromin truncated yes yes 0 0 0 By MS/MS 2 0 1 1 12.807 10.526 3 0.028899 13297 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 38.783 26.206 9104400 0 0 9104400 0 0 0 0 0 0 0 0 0 0 0 0 27204 1125 24845 228932 182000 182000 1 LAEIEEIK Unmodified 943.52261 0.52261272 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8 3.28 1 2 8 1 2 1 1 1 1 1 1 1 1 49.494 48.221 2 0.012605 54585 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 74.255 7.8258 483550000 366950 394250000 0 7953000 0 0 5710200 5133400 0 0 13843000 14021000 6224400 11709000 24335000 27205 2495 24846 228933;228934;228935;228936;228937;228938;228939;228940;228941;228942;228943 182001;182002;182003;182004;182005;182006;182007 182001 7 LAEIGAPIQGNR Unmodified 1237.6779 0.67788459 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 51.662 51.782 2 0.0047827 58731 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 56.432 48.111 40378000 0 0 0 0 5185700 5822100 4804100 0 3634200 5137500 0 10546000 0 5248300 0 27206 2290 24847 228944;228945;228946;228947;228948;228949;228950 182008;182009;182010;182011;182012;182013 182010 6 LAEIGAPIQGNREELVER Unmodified 1993.0593 0.059252799 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 2 1 1 1 1 1 1 65.365 65.453 3 1.893E-39 75335 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 138.08 119.32 2876100000 0 0 0 131010000 125980000 204350000 182090000 283690000 189760000 222290000 257370000 411010000 216690000 262460000 389350000 27207 2290 24848 228951;228952;228953;228954;228955;228956;228957;228958;228959;228960;228961;228962;228963 182014;182015;182016;182017;182018;182019;182020;182021;182022;182023;182024;182025;182026;182027;182028;182029;182030;182031;182032;182033;182034;182035;182036 182032 23 LAEIIWQNR Unmodified 1141.6244 0.62439245 1669;1450 P42229;P51692 STAT5A;STAT5B Signal transducer and activator of transcription 5A;Signal transducer and activator of transcription 5B no no 0 0 0 By matching By MS/MS 10 0 2 1 1 69.735 69.953 2 0.0071339 79686 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.568 42.459 7942400 0 0 0 0 0 3553400 0 0 0 0 0 0 0 0 4389000 27208 1450;1669 24849 228964;228965 182037 182037 1 LAEIMNRK Oxidation (M) 989.5328 0.53280025 455;2296 O75116;Q13464 ROCK2;ROCK1 Rho-associated protein kinase 2;Rho-associated protein kinase 1 no no 0 1 1 By MS/MS 2 0 1 1 15.344 11.232 2 0.042025 16714 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.787 25.663 17508000 17508000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27209 455;2296 24850 228966 182038 182038 0 LAEIQELHQSVR Unmodified 1421.7627 0.76267685 434 O60826 CCDC22 Coiled-coil domain-containing protein 22 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 48.406 48.664 3 0.00090934 54749 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 67.952 58.127 148490000 0 0 0 0 0 21252000 11513000 12408000 10952000 20471000 19928000 0 10579000 12499000 28889000 27210 434 24851 228967;228968;228969;228970;228971;228972;228973;228974;228975;228976 182039;182040;182041;182042;182043;182044;182045;182046 182042 8 LAEISDVWEEMK Oxidation (M) 1464.6806 0.68064628 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 1 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 73.759 73.926 2 0.00025042 85268 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 81.017 71.828 27870000 0 0 0 0 0 8479800 0 2338600 0 0 5746900 0 4199400 0 7105100 27211 2047 24852 228977;228978;228979;228980;228981;228982 182047;182048;182049;182050;182051 182048 3324 5 LAEISDVWEEMK Unmodified 1448.6857 0.68573166 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 87.397 83.122 2 2.0672E-15 104421 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 150.61 107.1 58593000 6591100 44919000 0 0 0 0 0 0 0 0 0 0 0 0 7082800 27212 2047 24852 228983;228984;228985 182052;182053;182054 182052 3 LAELARQLQESAAK Unmodified 1526.8417 0.84165545 4068 Q99871 HAUS7 HAUS augmin-like complex subunit 7 yes yes 0 0 1 By MS/MS 2 0 1 1 65.792 57.504 2 0.008355 77324 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.159 44.452 8118300 8118300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27213 4068 24853 228986 182055 182055 1 LAELEEALQK Unmodified 1142.6183 0.61830402 74 CON__P13647;P13647 KRT5 Keratin, type II cytoskeletal 5 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 2 14 1 1 2 1 1 2 1 1 1 1 1 1 1 1 62.031 61.176 2 1.6124E-69 71200 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 204.36 108.45 + 8735500000 13438000 716940000 0 1573100000 395880000 478870000 337510000 1384100000 230890000 806980000 620320000 683700000 857650000 307640000 328440000 27214 74 24854 228987;228988;228989;228990;228991;228992;228993;228994;228995;228996;228997;228998;228999;229000;229001;229002 182056;182057;182058;182059;182060;182061;182062;182063;182064;182065;182066;182067;182068;182069;182070;182071;182072;182073;182074;182075;182076;182077;182078;182079;182080;182081;182082;182083;182084;182085;182086;182087;182088;182089 182085 34 LAELEEFINGPNNAHIQQVGDR Unmodified 2463.2142 0.21424989 2040 Q00610 CLTC Clathrin heavy chain 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 80.735 80.867 3 3.5216E-20 93156 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.208 79.496 71222000 0 0 0 0 0 4872300 0 4168000 0 8115200 7570400 5450600 1759600 3676400 35609000 27215 2040 24855 229003;229004;229005;229006;229007;229008;229009;229010 182090;182091;182092;182093;182094;182095 182092 6 LAELHADLK Unmodified 1008.5604 0.56039521 1284 P30533 LRPAP1 Alpha-2-macroglobulin receptor-associated protein yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 38.793 39.394 2 0.010372 42522 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.42 33.784 15170000 0 0 0 0 0 0 0 0 0 0 4940400 0 0 0 10230000 27216 1284 24856 229011;229012 182096 182096 1 LAELNRNFEK Unmodified 1232.6513 0.65133548 1517 P46939 UTRN Utrophin yes yes 0 0 1 By MS/MS 2 0 1 1 45.182 38.19 3 0.035603 52544 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 35.348 20.669 33734000 33734000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27217 1517 24857 229013 182097 182097 1 LAELPPTPLR Unmodified 1105.6495 0.64954457 3432 Q8NEY1 NAV1 Neuron navigator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.017 69.096 2 0.0069975 78908 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 63.534 48.865 51963000 0 0 0 2817200 3045400 3431400 4228400 3441500 2808200 3863100 7055100 4838900 4744900 4015400 7672900 27218 3432 24858 229014;229015;229016;229017;229018;229019;229020;229021;229022;229023;229024;229025 182098;182099;182100;182101;182102;182103;182104 182103 7 LAELQAK Unmodified 771.44905 0.44905385 207 O14737 PDCD5 Programmed cell death protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 22.529 21.795 2 0.023423 22505 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 85.89 11.915 621070000 10185000 201710000 5627200 0 8404400 0 17111000 10815000 11249000 20380000 72786000 69973000 14900000 56615000 121320000 27219 207 24859 229026;229027;229028;229029;229030;229031;229032;229033;229034;229035;229036;229037;229038 182105;182106;182107;182108;182109;182110;182111;182112 182112 8 LAELQEQLK Unmodified 1070.5972 0.59717465 441;2493 O60885;Q15059 BRD4;BRD3 Bromodomain-containing protein 4;Bromodomain-containing protein 3 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 47.74 47.965 2 0.0043294 54035 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 87.181 28.585 430030000 0 0 0 25365000 0 30428000 33378000 30374000 26632000 48067000 50973000 43259000 41506000 36694000 63351000 27220 441;2493 24860 229039;229040;229041;229042;229043;229044;229045;229046;229047;229048;229049 182113;182114;182115;182116;182117;182118;182119;182120;182121;182122 182119 3 LAELQEQLR Unmodified 1098.6033 0.60332266 1189 P25440 BRD2 Bromodomain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 49.47 49.695 2 0.0030909 54977 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 127.56 48.096 51636000 0 0 0 13969000 0 0 10869000 0 0 0 0 9443700 0 0 17354000 27221 1189 24861 229050;229051;229052;229053;229054;229055;229056;229057;229058 182123;182124;182125;182126;182127;182128;182129;182130;182131;182132 182128 10 LAELTGRPMR Unmodified 1142.623 0.62301224 1506 P46736 BRCC3 Lys-63-specific deubiquitinase BRCC36 yes yes 0 0 1 By MS/MS By matching 10 0 2 1 1 34.901 35.418 3 0.039011 38154 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 28.956 11.483 23868000 0 0 0 0 0 0 0 0 0 0 0 0 0 7469200 16399000 27222 1506 24862 229059;229060 182133 182133 1 LAEMLDQR Unmodified 974.48552 0.48551571 2816 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 40.345 40.473 2 0.020339 44885 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 62.88 42.181 210180000 0 0 0 10440000 12707000 16252000 15806000 14632000 12864000 19675000 22697000 0 18560000 20345000 46200000 27223 2816 24863 229061;229062;229063;229064;229065;229066;229067;229068;229069;229070;229071 182134;182135;182136 182135 2 LAEMLDQR Oxidation (M) 990.48043 0.48043033 2816 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 0 1 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 24.964 25.179 2 0.015237 26530 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 60.59 14.638 82366000 0 0 0 0 5513600 6872900 7632000 7333200 6676600 7783600 0 10797000 14993000 4595400 10170000 27224 2816 24863 229072;229073;229074;229075;229076;229077;229078;229079;229080;229081 182137;182138;182139;182140;182141;182142 182138 4455 6 LAEMLDQRQAIEDELREHIEK Unmodified 2565.2857 0.28570027 2816 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 0 0 2 By MS/MS 2 0 1 1 86.209 78.079 4 3.0279E-10 101800 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.334 55.18 24488000 24488000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27225 2816 24864 229082 182143 182143 1 LAEMPADSGYPAYLGAR Oxidation (M) 1796.8403 0.84033482 1398 P38606 ATP6V1A V-type proton ATPase catalytic subunit A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 66.097 66.161 2 3.205E-25 75813 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 108.35 99.835 63189000 0 0 0 4623400 2980100 11034000 5161900 3297200 0 0 6130200 10603000 0 8334700 11025000 27226 1398 24865 229083;229084;229085;229086;229087;229088;229089;229090;229091 182144;182145;182146;182147;182148;182149 182144 2164 6 LAEMPADSGYPAYLGAR Unmodified 1780.8454 0.8454202 1398 P38606 ATP6V1A V-type proton ATPase catalytic subunit A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 75.676 75.682 2 1.674E-25 87403 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 140.24 123.99 99473000 0 0 0 6064800 3695900 12420000 4627200 0 0 13160000 20371000 15436000 9109800 14588000 0 27227 1398 24865 229092;229093;229094;229095;229096;229097;229098;229099;229100;229101 182150;182151;182152;182153;182154;182155;182156;182157;182158;182159 182153 10 LAEMSLEQDNIK Oxidation (M) 1405.6759 0.67589525 5245 Q9Y5Q9 GTF3C3 General transcription factor 3C polypeptide 3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 42.434 42.563 2 0.0022763 47631 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 60.342 19.233 158720000 0 0 0 37105000 0 0 0 0 0 52277000 0 69338000 0 0 0 27228 5245 24866 229102;229103;229104 182160;182161;182162 182160 6649 2 LAEMSLEQDNIK Unmodified 1389.681 0.68098063 5245 Q9Y5Q9 GTF3C3 General transcription factor 3C polypeptide 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 57.857 58.283 2 2.6139E-08 65224 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 132.91 116.28 712610000 0 0 0 0 0 0 0 103980000 0 0 175140000 202770000 0 0 230730000 27229 5245 24866 229105;229106;229107;229108 182163;182164;182165;182166 182163 4 LAENACTLADLTEGQVGK Unmodified 1888.92 0.9200417 810 P05423 POLR3D DNA-directed RNA polymerase III subunit RPC4 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 76.97 76.153 2 1.9881E-53 93559 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 192.4 164.43 248490000 0 224290000 0 0 0 5287500 5865500 5188800 0 0 0 0 0 0 7854000 27230 810 24867 229109;229110;229111;229112;229113 182167;182168;182169;182170 182168 4 LAENIDAQLK Unmodified 1113.603 0.60298831 1387 P37198 NUP62 Nuclear pore glycoprotein p62 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 49.102 48.829 2 8.186E-11 54087 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 172.25 97.205 1254000000 0 293280000 0 0 56890000 53657000 72865000 75442000 63720000 99853000 94329000 129490000 101060000 93624000 119820000 27231 1387 24868 229114;229115;229116;229117;229118;229119;229120;229121;229122;229123;229124;229125;229126;229127;229128 182171;182172;182173;182174;182175;182176;182177;182178;182179;182180;182181;182182;182183;182184;182185;182186;182187;182188;182189;182190 182185 19 LAEPQSQGNSQVLLDAPIQLSK Unmodified 2335.2383 0.23833938 4653 Q9NUQ8 ABCF3 ATP-binding cassette sub-family F member 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 82.991 83.054 2;3 7.3813E-72 96423 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 126.02 122.73 1190800000 0 0 0 18168000 66248000 89443000 65242000 77027000 67197000 115520000 150000000 152080000 101060000 116850000 171970000 27232 4653 24869 229129;229130;229131;229132;229133;229134;229135;229136;229137;229138;229139;229140;229141;229142;229143;229144;229145;229146;229147;229148;229149;229150;229151;229152 182191;182192;182193;182194;182195;182196;182197;182198;182199;182200;182201;182202;182203;182204 182199 14 LAEPSQLLK Unmodified 997.5808 0.5807963 1010 P14923 JUP Junction plakoglobin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 57.906 58.024 2 0.0031256 65769 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 89.698 37.911 975430000 0 0 0 220620000 46266000 49855000 47269000 235590000 32462000 44774000 67080000 69256000 90290000 37920000 34041000 27233 1010 24870 229153;229154;229155;229156;229157;229158;229159;229160;229161;229162;229163;229164 182205;182206;182207;182208;182209;182210;182211;182212;182213;182214;182215;182216;182217;182218 182206 14 LAEPTEK Unmodified 786.41233 0.41233399 4641 Q9NU22 MDN1 Midasin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 12.331 12.58 2 0.029029 11272 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.035 32.968 20641000 0 0 0 0 2785300 0 0 0 0 0 2760500 4706100 3902100 3114700 3371900 27234 4641 24871 229165;229166;229167;229168;229169;229170 182219;182220 182220 2 LAEPYGK Unmodified 776.40685 0.40685468 1473 P43243 MATR3 Matrin-3 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.489 20.693 2 0.025846 21403 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 79.939 79.939 3074100000 0 0 0 144980000 192550000 175870000 260310000 283130000 184790000 227230000 320300000 341940000 332240000 257310000 353490000 27235 1473 24872 229171;229172;229173;229174;229175;229176;229177;229178;229179;229180;229181;229182 182221;182222;182223;182224;182225;182226 182225 6 LAEQAER Unmodified 815.41373 0.41373097 1940;1882;1312;1869;1311;1214;2109 P62258;P61981;P27348;P31946;P31947;P63104;Q04917 YWHAE;YWHAG;YWHAQ;YWHAB;SFN;YWHAZ;YWHAH 14-3-3 protein epsilon;14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed;14-3-3 protein theta;14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein sigma;14-3-3 protein zeta/delta;14-3-3 protein eta no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 2 1 1 2 1 1 1 1 1 2 1 7.1135 7.2146 2 0.02229 5200 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 105.2 46.955 226020000 0 0 0 18199000 11100000 21094000 14572000 17655000 13517000 13563000 59447000 19296000 13533000 24047000 0 27236 1882;1869;1214;1311;1312;1940;2109 24873 229183;229184;229185;229186;229187;229188;229189;229190;229191;229192;229193;229194;229195;229196;229197 182227;182228;182229;182230;182231;182232;182233;182234;182235;182236 182227 9 LAEQAERYDDMAAAMK Unmodified 1811.8182 0.81821917 1869;1311 P61981;P31946 YWHAG;YWHAB 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed;14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.35 3.62 4 3 13 2 4 1 1 1 1 1 1 1 1 2 2 1 1 58.528 56.605 2;3 6.7561E-08 64416 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 88.73 82.825 2958500000 205220000 1959100000 177260000 12559000 10992000 16253000 12471000 16045000 0 25999000 80745000 80783000 27475000 77085000 256520000 27237 1869;1311 24874 229198;229199;229200;229201;229202;229203;229204;229205;229206;229207;229208;229209;229210;229211;229212;229213;229214;229215;229216;229217 182237;182238;182239;182240;182241;182242;182243;182244;182245;182246;182247;182248;182249;182250;182251;182252;182253 182246 14 LAEQAERYDDMAAAMK 2 Oxidation (M) 1843.808 0.80804841 1869;1311 P61981;P31946 YWHAG;YWHAB 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed;14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed no no 0 2 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 6.33 3.93 6 1 8 2 3 2 1 1 1 2 2 1 31.881 29.868 2;3 2.2272E-05 32635 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 73.156 17.821 1048900000 66468000 600000000 117220000 0 0 18886000 23730000 0 11899000 0 62806000 141020000 0 6900000 0 27238 1869;1311 24874 229218;229219;229220;229221;229222;229223;229224;229225;229226;229227;229228;229229;229230;229231;229232 182254;182255;182256;182257;182258;182259;182260;182261;182262;182263;182264 182261 1943;1944;3024;3025 8 LAEQAERYDDMAAAMK Oxidation (M) 1827.8131 0.81313379 1869;1311 P61981;P31946 YWHAG;YWHAB 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed;14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed no no 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.87 3.54 4 11 2 1 1 1 1 2 1 1 2 1 2 42.412 41.041 2;3 8.8585E-05 43972 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.331 15.05 827300000 98644000 280550000 68556000 10836000 0 0 7133200 20080000 9682900 0 33912000 86609000 10245000 0 201050000 27239 1869;1311 24874 229233;229234;229235;229236;229237;229238;229239;229240;229241;229242;229243;229244;229245;229246;229247 182265;182266;182267;182268;182269;182270;182271;182272;182273;182274;182275 182268 1943;1944;3024;3025 10 LAEQAERYDDMAACMK Oxidation (M) 1916.8067 0.80666821 1940 P63104 YWHAZ 14-3-3 protein zeta/delta yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.42 3.92 13 2 18 5 6 4 2 1 1 1 2 1 1 2 2 1 2 2 42.318 39.91 2;3 2.2608E-21 49522 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.34 112.91 4019000000 324700000 2817300000 241710000 21913000 3930100 10018000 12873000 12529000 6678100 20335000 123180000 108510000 20736000 69054000 225590000 27240 1940 24875 229248;229249;229250;229251;229252;229253;229254;229255;229256;229257;229258;229259;229260;229261;229262;229263;229264;229265;229266;229267;229268;229269;229270;229271;229272;229273;229274;229275;229276;229277;229278;229279;229280 182276;182277;182278;182279;182280;182281;182282;182283;182284;182285;182286;182287;182288;182289;182290;182291;182292;182293;182294;182295;182296;182297;182298;182299;182300;182301;182302;182303;182304;182305;182306;182307;182308;182309 182280 3117;3118 33 LAEQAERYDDMAACMK Unmodified 1900.8118 0.81175358 1940 P63104 YWHAZ 14-3-3 protein zeta/delta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.82 3.83 7 2 13 2 5 2 1 1 1 1 2 2 1 2 2 54.982 52.86 2;3 3.1605E-50 68986 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 165.86 145.09 5660700000 298200000 4149700000 271870000 0 0 23115000 0 31566000 12747000 28301000 131050000 116710000 38188000 134560000 424690000 27241 1940 24875 229281;229282;229283;229284;229285;229286;229287;229288;229289;229290;229291;229292;229293;229294;229295;229296;229297;229298;229299;229300;229301;229302 182310;182311;182312;182313;182314;182315;182316;182317;182318;182319;182320;182321;182322;182323;182324;182325;182326;182327;182328 182315 18 LAEQAERYDDMAACMK 2 Oxidation (M) 1932.8016 0.80158283 1940 P63104 YWHAZ 14-3-3 protein zeta/delta yes yes 0 2 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.89 3.63 4 2 3 1 3 2 1 1 1 32.654 29.756 3 8.7665E-05 40420 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 64.52 61.292 1417700000 98016000 1149400000 99297000 0 0 0 21889000 0 0 22388000 0 0 26723000 0 0 27242 1940 24875 229303;229304;229305;229306;229307;229308;229309;229310;229311 182329;182330;182331;182332;182333;182334;182335 182332 3117;3118 6 LAEQAERYDDMASAMK Unmodified 1827.8131 0.81313379 2109 Q04917 YWHAH 14-3-3 protein eta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 4 2 12 2 3 1 2 1 1 2 3 3 46.567 44.996 2;3 0.00034699 51315 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 52.862 0 930280000 54123000 599010000 68556000 0 0 17514000 0 0 0 8159200 12334000 26803000 0 56848000 86931000 27243 2109 24876 229312;229313;229314;229315;229316;229317;229318;229319;229320;229321;229322;229323;229324;229325;229326;229327;229328;229329 182336;182337;182338;182339;182340;182341;182342;182343;182344;182345;182346;182347;182348;182349;182350;182351;182352;182353;182354 182344 17 LAEQAERYDDMASAMK Oxidation (M) 1843.808 0.80804841 2109 Q04917 YWHAH 14-3-3 protein eta yes yes 0 1 1 By MS/MS 3 0 1 1 44.114 39.307 3 0.0042281 48956 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 52.823 7.2094 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27244 2109 24876 229330 182355 182355 3412;3413 1 LAEQAERYDDMASAMK 2 Oxidation (M) 1859.803 0.80296304 2109 Q04917 YWHAH 14-3-3 protein eta yes yes 0 2 1 By MS/MS 3 0 1 1 31.827 27.386 3 0.004642 34367 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 45.33 39.67 7328000 0 7328000 0 0 0 0 0 0 0 0 0 0 0 0 0 27245 2109 24876 229331 182356 182356 3412;3413 0 LAEQAERYDDMATCMK Unmodified 1930.8223 0.82231827 1214 P27348 YWHAQ 14-3-3 protein theta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 6.45 3.89 4 1 6 2 2 1 1 1 1 1 2 54.04 51.437 2;3 1.9553E-31 66052 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.29 119.92 2169400000 105230000 1889500000 53258000 0 0 0 0 7932300 0 9235100 18649000 0 0 15512000 70164000 27246 1214 24877 229332;229333;229334;229335;229336;229337;229338;229339;229340;229341;229342 182357;182358;182359;182360;182361;182362;182363;182364;182365;182366;182367;182368;182369 182358 13 LAEQAERYDDMATCMK Oxidation (M) 1946.8172 0.81723289 1214 P27348 YWHAQ 14-3-3 protein theta yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 5.14 3.82 11 2 8 3 6 4 1 1 2 1 2 1 42.42 39.356 2;3 3.1889E-21 48849 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.53 113.87 1511900000 98405000 1226000000 63322000 0 0 5787500 0 2964600 0 0 49791000 25301000 23828000 16473000 0 27247 1214 24877 229343;229344;229345;229346;229347;229348;229349;229350;229351;229352;229353;229354;229355;229356;229357;229358;229359;229360;229361;229362;229363 182370;182371;182372;182373;182374;182375;182376;182377;182378;182379;182380;182381;182382;182383;182384;182385;182386 182371 1782;1783 17 LAEQAERYDDMATCMK 2 Oxidation (M) 1962.8121 0.81214751 1214 P27348 YWHAQ 14-3-3 protein theta yes yes 0 2 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 34.116 28.948 3 0.0024747 40450 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.527 48.755 451780000 46162000 405610000 0 0 0 0 0 0 0 0 0 0 0 0 0 27248 1214 24877 229364;229365;229366 182387;182388 182388 1782;1783 0 LAEQAERYDEMVESMK Oxidation (M) 1943.8605 0.86047792 1882 P62258 YWHAE 14-3-3 protein epsilon yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.97 3.91 12 3 14 4 7 4 2 1 1 1 1 2 2 4 54.878 52.018 2;3 2.4157E-07 58126 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.41 79.115 4780100000 712420000 2594000000 1074500000 10133000 2027200 11572000 0 0 0 25061000 47340000 51839000 0 38410000 212800000 27249 1882 24878 229367;229368;229369;229370;229371;229372;229373;229374;229375;229376;229377;229378;229379;229380;229381;229382;229383;229384;229385;229386;229387;229388;229389;229390;229391;229392;229393;229394;229395 182389;182390;182391;182392;182393;182394;182395;182396;182397;182398;182399;182400;182401;182402;182403;182404;182405;182406;182407;182408;182409;182410;182411;182412;182413;182414;182415;182416;182417;182418;182419;182420 182396 3052;3053 27 LAEQAERYDEMVESMK Unmodified 1927.8656 0.86556329 1882 P62258 YWHAE 14-3-3 protein epsilon yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.26 3.89 10 3 14 5 5 3 1 1 1 1 1 2 2 1 2 2 70.632 68.476 2;3 4.2145E-58 86940 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 165.49 143.82 8213200000 1964000000 5192700000 579580000 0 8557400 16171000 0 12386000 4533200 15895000 39356000 38789000 6492300 42686000 291970000 27250 1882 24878 229396;229397;229398;229399;229400;229401;229402;229403;229404;229405;229406;229407;229408;229409;229410;229411;229412;229413;229414;229415;229416;229417;229418;229419;229420;229421;229422 182421;182422;182423;182424;182425;182426;182427;182428;182429;182430;182431;182432;182433;182434;182435;182436;182437;182438;182439;182440;182441;182442;182443;182444;182445;182446 182425 24 LAEQAERYDEMVESMK 2 Oxidation (M) 1959.8554 0.85539254 1882 P62258 YWHAE 14-3-3 protein epsilon yes yes 0 2 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By MS/MS 6.37 3.84 6 3 10 3 4 2 1 1 1 1 1 1 1 1 1 1 41.993 39.602 2;3 0.00010324 44070 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.529 66.521 1566900000 86392000 767220000 547830000 10671000 7597600 9921500 9505200 5082400 5052800 17874000 0 31027000 9595700 0 59101000 27251 1882 24878 229423;229424;229425;229426;229427;229428;229429;229430;229431;229432;229433;229434;229435;229436;229437;229438;229439;229440;229441 182447;182448;182449;182450;182451;182452;182453 182449 3052;3053 6 LAEQAERYDEMVESMKK Unmodified 2055.9605 0.96052631 1882 P62258 YWHAE 14-3-3 protein epsilon yes yes 0 0 2 By MS/MS By MS/MS 2 0 3 2 1 71.007 63.557 3;4 2.7111E-26 83899 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 122.08 112.55 113970000 69071000 44904000 0 0 0 0 0 0 0 0 0 0 0 0 0 27252 1882 24879 229442;229443;229444 182454;182455;182456 182456 2 LAEQAERYEDMAAFMK Oxidation (M) 1917.8601 0.86008398 1312 P31947 SFN 14-3-3 protein sigma yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 6 2 2 4 2 67.959 62.317 3 9.2632E-05 78324 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 91.076 75.838 765530000 129130000 389620000 246780000 0 0 0 0 0 0 0 0 0 0 0 0 27253 1312 24880 229445;229446;229447;229448;229449;229450;229451;229452 182457;182458;182459;182460;182461;182462;182463;182464 182461 1946;1947 7 LAEQAERYEDMAAFMK Unmodified 1901.8652 0.86516936 1312 P31947 SFN 14-3-3 protein sigma yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.83 3.67 3 1 2 1 2 1 1 1 78.529 75.463 3 8.3893E-24 94214 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.92 102.77 776050000 195020000 432630000 86052000 0 0 0 0 0 0 0 0 0 0 5609200 56735000 27254 1312 24880 229453;229454;229455;229456;229457;229458 182465;182466;182467;182468;182469 182465 4 LAEQAERYEDMAAFMK 2 Oxidation (M) 1933.855 0.85499861 1312 P31947 SFN 14-3-3 protein sigma yes yes 0 2 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching 5.4 3.77 2 1 2 1 1 1 1 1 53.236 49.76 2;3 6.4224E-05 66764 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.472 50.079 214850000 38305000 144560000 19348000 8000500 0 0 0 0 0 0 0 0 0 4644400 0 27255 1312 24880 229459;229460;229461;229462;229463 182470;182471;182472;182473 182471 1946;1947 3 LAEQFPR Unmodified 859.4552 0.45520186 3900 Q96K17 BTF3L4 Transcription factor BTF3 homolog 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 37.782 37.965 2 0.019693 42223 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 109.7 78.125 522840000 0 0 0 30500000 28659000 22504000 39725000 0 22722000 38467000 73432000 69258000 46271000 60939000 90361000 27256 3900 24881 229464;229465;229466;229467;229468;229469;229470;229471;229472;229473;229474 182474;182475;182476;182477;182478;182479;182480;182481;182482;182483 182476 7 LAEQFPRQVLDSK Unmodified 1529.8202 0.82019173 3900 Q96K17 BTF3L4 Transcription factor BTF3 homolog 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 2 2 2 67.037 61.252 2;3 3.7641E-20 81535 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 140.14 113.36 665130000 503030000 72630000 89477000 0 0 0 0 0 0 0 0 0 0 0 0 27257 3900 24882 229475;229476;229477;229478;229479;229480 182484;182485;182486;182487;182488;182489 182487 6 LAEQLPGK Unmodified 854.48617 0.48616764 4399 Q9H4I2 ZHX3 Zinc fingers and homeoboxes protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 31.271 30.43 2 0.017177 38169 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.862 49.21 99895000 0 52273000 0 3021600 5079300 6060300 5777000 5203400 5068500 0 7256900 0 0 0 10155000 27258 4399 24883 229481;229482;229483;229484;229485;229486;229487;229488;229489;229490 182490;182491;182492;182493 182491 4 LAEQYDAFVK Unmodified 1182.5921 0.59208927 2703 Q53H80 AKIRIN2 Akirin-2 yes yes 0 0 0 By MS/MS 2 0 1 1 65.217 59.299 2 0.0040347 75861 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.649 52.871 27025000 0 27025000 0 0 0 0 0 0 0 0 0 0 0 0 0 27259 2703 24884 229491 182494;182495 182495 2 LAESEGLSLLNVGIGPK Unmodified 1695.9407 0.94070079 3940 Q96NY9 MUS81 Crossover junction endonuclease MUS81 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 88.503 88.424 2 0.049307 102524 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 37.968 28.313 1804000 0 0 0 0 878920 925080 0 0 0 0 0 0 0 0 0 27260 3940 24885 229492;229493 182496 182496 1 LAESMIQNLIK Oxidation (M) 1274.6904 0.69042311 4630 Q9NSV4 DIAPH3 Protein diaphanous homolog 3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 73.795 73.966 2 0.00027258 85262 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 86.136 55.062 39540000 0 0 0 0 0 6074200 0 2875900 0 7996300 5133400 8012500 4385400 0 5062600 27261 4630 24886 229494;229495;229496;229497;229498;229499;229500;229501 182497;182498;182499;182500;182501;182502;182503 182498 6024 7 LAESMIQNLIK Unmodified 1258.6955 0.69550848 4630 Q9NSV4 DIAPH3 Protein diaphanous homolog 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 83.315 83.412 2 0.0069149 96531 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 69.598 54.447 46889000 0 0 0 0 2221800 2882800 1615600 3329300 0 7222200 4404100 6256400 3331800 4968700 10657000 27262 4630 24886 229502;229503;229504;229505;229506;229507;229508;229509;229510;229511 182504;182505;182506 182505 3 LAESVEK Unmodified 774.41233 0.41233399 5231 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 0 0 By MS/MS 2 0 1 1 14.211 10.896 2 0.040529 14534 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.462 12.064 548100000 0 548100000 0 0 0 0 0 0 0 0 0 0 0 0 0 27263 5231 24887 229512 182507 182507 1 LAETMNNIDR Unmodified 1175.5605 0.56047157 2766 Q5T0N5 FNBP1L Formin-binding protein 1-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 35.743 36.076 2 0.011313 39387 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 74.92 33.268 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27264 2766 24888 229513;229514;229515;229516;229517 182508;182509;182510;182511;182512 182510 5 LAETVFNFQEK Unmodified 1324.6663 0.66631685 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.168 74.229 2 1.9611E-05 84552 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 150.35 100.54 508640000 0 0 0 30619000 27711000 46892000 35992000 42750000 39957000 51629000 43961000 58550000 37792000 36231000 56558000 27265 2392 24889 229518;229519;229520;229521;229522;229523;229524;229525;229526;229527;229528;229529 182513;182514;182515;182516;182517;182518;182519;182520;182521;182522;182523;182524 182520 11 LAEVAEGGDVLR Unmodified 1227.6459 0.64591575 5396 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 39 4 3 4 3 3 4 3 2 4 3 3 3 60.04 60.13 2 0.0050984 69901 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 69.825 33.429 + 301080000 0 0 0 37465000 9077000 38410000 9895200 29191000 28441000 23321000 16390000 57957000 23822000 12411000 14703000 27266 5396 24890 229530;229531;229532;229533;229534;229535;229536;229537;229538;229539;229540;229541;229542;229543;229544;229545;229546;229547;229548;229549;229550;229551;229552;229553;229554;229555;229556;229557;229558;229559;229560;229561;229562;229563;229564;229565;229566;229567;229568 182525;182526;182527;182528;182529;182530;182531;182532;182533;182534;182535;182536;182537;182538;182539;182540;182541;182542;182543;182544 182526 15 LAEVEAALEK Unmodified 1071.5812 0.58119023 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.685 51.777 2 0.00054531 58619 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 133.13 54.618 161260000 0 0 0 24368000 11650000 13663000 12022000 0 12780000 12830000 20633000 29125000 14528000 9656400 0 27267 2501 24891 229569;229570;229571;229572;229573;229574;229575;229576;229577;229578;229579;229580 182545;182546;182547;182548;182549;182550;182551;182552;182553;182554;182555;182556;182557;182558 182545 14 LAEVGQYEQVK Unmodified 1262.6507 0.65066678 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.83 44.004 2 2.7508E-06 48938 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 169.09 140.88 355340000 0 0 0 14695000 21488000 28940000 27405000 34070000 26920000 22472000 32319000 33724000 32518000 39662000 41127000 27268 19 24892 229581;229582;229583;229584;229585;229586;229587;229588;229589;229590;229591;229592 182559;182560;182561;182562;182563;182564;182565;182566;182567;182568;182569 182564 11 LAEVILK Unmodified 784.50584 0.50584045 3547 Q8WUI4 HDAC7 Histone deacetylase 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 52.707 51.999 2 0.021131 67575 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.61 36.421 108080000 0 36137000 0 5391800 4391000 7610600 5122100 5635700 6481800 6283800 8737200 8891100 0 6058200 7340000 27269 3547 24893 229593;229594;229595;229596;229597;229598;229599;229600;229601;229602;229603;229604;229605 182570;182571;182572;182573;182574 182571 5 LAEVLVGEQQQCQDAK Unmodified 1814.8833 0.88326227 4413 Q9H6D7 HAUS4 HAUS augmin-like complex subunit 4 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 1 1 6 2 1 1 1 1 1 1 52.91 50.97 2 3.0574E-103 64394 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 218.62 209.36 63815000 0 43600000 0 4989200 4100100 0 5806600 5319700 0 0 0 0 0 0 0 27270 4413 24894 229606;229607;229608;229609;229610;229611;229612;229613 182575;182576;182577;182578;182579;182580;182581 182577 7 LAEVQDSSMPVPAQPK Unmodified 1695.8502 0.85017123 3940 Q96NY9 MUS81 Crossover junction endonuclease MUS81 yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By matching 10 0 7 1 1 1 1 1 1 1 59.063 59.155 2 4.8259E-06 67491 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 80.763 65.62 28258000 0 0 0 2706500 0 4060600 0 0 2576400 5546200 0 0 5209600 3291700 4867100 27271 3940 24895 229614;229615;229616;229617;229618;229619;229620 182582;182583 182582 2 LAEVSQNIEK Unmodified 1129.5979 0.59790293 3979 Q96RU3 FNBP1 Formin-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 33.603 33.084 2 0.0014446 36174 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 92.051 50.175 326810000 0 167220000 0 11737000 10781000 11964000 8715900 7010600 9579600 13369000 18904000 17998000 17987000 9893300 21656000 27272 3979 24896 229621;229622;229623;229624;229625;229626;229627;229628;229629;229630;229631;229632;229633;229634 182584;182585;182586;182587;182588;182589;182590;182591;182592;182593;182594;182595;182596;182597 182591 14 LAEVTEEEWLSIPEVGDARNK Unmodified 2384.186 0.18596945 601 O94906 PRPF6 Pre-mRNA-processing factor 6 yes yes 0 0 1 By MS/MS 2 0 1 1 90.631 82.501 3 2.2811E-09 107073 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.974 78.262 12190000 12190000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27273 601 24897 229635 182598 182598 1 LAEYLVER Unmodified 991.53385 0.53384611 3432 Q8NEY1 NAV1 Neuron navigator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 51.002 51.41 2 0.039991 58030 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 80.684 12.469 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27274 3432 24898 229636;229637;229638;229639 182599;182600;182601;182602 182600 4 LAFDMATNAACASLLK Oxidation (M) 1711.8273 0.82732729 3678 Q92882 OSTF1 Osteoclast-stimulating factor 1 yes yes 0 1 0 By MS/MS By matching 2 0 2 1 1 82.532 78.927 2 0.0097923 97997 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 47.189 35.734 54959000 0 52988000 1970500 0 0 0 0 0 0 0 0 0 0 0 0 27275 3678 24899 229640;229641 182603 182603 5229 1 LAFDMATNAACASLLK Unmodified 1695.8324 0.83241267 3678 Q92882 OSTF1 Osteoclast-stimulating factor 1 yes yes 0 0 0 By MS/MS 2 0 1 1 90.214 85.318 2 0.0011507 105992 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.46 75.041 40600000 0 40600000 0 0 0 0 0 0 0 0 0 0 0 0 0 27276 3678 24899 229642 182604 182604 1 LAFNSLLEK Unmodified 1033.5808 0.5807963 494 O75400 PRPF40A Pre-mRNA-processing factor 40 homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78.054 77.079 2 1.5364E-13 88968 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 167.23 88.113 2917700000 246220000 115230000 44747000 103400000 103630000 130310000 194190000 159860000 199470000 250700000 300650000 255110000 169600000 237120000 407500000 27277 494 24900 229643;229644;229645;229646;229647;229648;229649;229650;229651;229652;229653;229654;229655;229656;229657 182605;182606;182607;182608;182609;182610;182611;182612;182613;182614;182615;182616;182617;182618;182619 182605 15 LAFPGETLSDIPCK Unmodified 1546.7701 0.77012999 2234 Q13111 CHAF1A Chromatin assembly factor 1 subunit A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.24 2 1 10 2 1 1 1 1 1 1 1 1 1 1 1 81.57 80.791 2 9.0394E-06 99653 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.79 87.096 194710000 0 152530000 2562300 1392700 3035600 3386000 0 3899900 3452400 4552500 4908200 5043900 4047100 5901000 0 27278 2234 24901 229658;229659;229660;229661;229662;229663;229664;229665;229666;229667;229668;229669;229670 182620;182621;182622;182623;182624;182625;182626;182627;182628;182629;182630;182631;182632 182622 13 LAFSNFGNLR Unmodified 1137.5931 0.59309232 3180 Q86W92 PPFIBP1 Liprin-beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.261 77.315 2 0.0014004 89266 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 105.57 61.76 65434000 0 0 0 6619300 0 6798900 6450600 6036600 9846600 8199100 0 13766000 7716200 0 0 27279 3180 24902 229671;229672;229673;229674;229675;229676;229677;229678;229679;229680;229681;229682 182633;182634;182635;182636;182637;182638;182639;182640;182641;182642;182643;182644 182633 12 LAFSNFGNLRK Unmodified 1265.6881 0.68805534 3180 Q86W92 PPFIBP1 Liprin-beta-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.621 65.707 3 0.00012224 75659 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 87.298 53.337 302000000 0 0 0 12693000 5794600 40401000 14921000 20994000 33911000 15103000 20262000 45766000 23252000 19354000 49553000 27280 3180 24903 229683;229684;229685;229686;229687;229688;229689;229690;229691;229692;229693;229694 182645;182646;182647;182648;182649;182650;182651;182652;182653;182654;182655;182656;182657;182658;182659;182660 182656 16 LAFSVTNNVIR Unmodified 1232.6877 0.68772099 2756 Q5SRE5 NUP188 Nucleoporin NUP188 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 75.547 75.647 2 0.00047061 87286 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 84.213 62.127 35708000 0 0 0 0 3957900 0 0 5553300 0 5015400 0 6011200 0 7087600 8082300 27281 2756 24904 229695;229696;229697;229698;229699;229700;229701;229702;229703 182661;182662;182663;182664;182665;182666;182667;182668;182669 182668 9 LAFYPNQDGDILR Unmodified 1520.7623 0.7623425 2463 Q14C86 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.518 79.608 2 4.5746E-05 91976 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 88.681 73.708 60526000 0 0 0 0 3798700 7107900 4593800 5377000 3626400 7339200 7949800 9375400 4424900 6933000 0 27282 2463 24905 229704;229705;229706;229707;229708;229709;229710;229711;229712;229713;229714 182670;182671;182672;182673;182674;182675;182676;182677;182678;182679;182680 182670 11 LAGANPAVITCDELLLGHEK Unmodified 2120.0936 0.093589394 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.39 3.71 1 3 2 12 3 2 1 1 1 1 1 1 1 1 1 1 1 1 1 84.289 83.387 3 8.104E-45 102907 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 137.13 131.81 2671900000 257680000 1327600000 430980000 8948700 25849000 51955000 23366000 31840000 41779000 103390000 57396000 67792000 26388000 60510000 156430000 27283 1986 24906 229715;229716;229717;229718;229719;229720;229721;229722;229723;229724;229725;229726;229727;229728;229729;229730;229731;229732 182681;182682;182683;182684;182685;182686;182687;182688;182689;182690;182691;182692;182693;182694;182695;182696;182697;182698;182699;182700;182701;182702;182703 182684 22 LAGAPSEDPQFPK Unmodified 1355.6721 0.67213051 145 O00391 QSOX1 Sulfhydryl oxidase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 53.767 53.427 2 0.0007354 61221 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 71.349 61.955 17978000 0 0 0 9185900 3557800 0 0 5234000 0 0 0 0 0 0 0 27284 145 24907 229733;229734;229735 182704;182705;182706 182705 3 LAGAQQVQTQIQVAK Unmodified 1581.8839 0.88385462 3915 Q96L91 EP400 E1A-binding protein p400 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 54.187 53.813 2 1.056E-18 61186 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 135.86 118.42 76983000 0 22132000 0 0 0 6384900 7011900 8095700 0 8227500 6982900 6611900 5166200 0 6369200 27285 3915 24908 229736;229737;229738;229739;229740;229741;229742;229743;229744;229745;229746 182707;182708;182709;182710;182711;182712;182713;182714;182715 182709 9 LAGASPATVAAAAAAGSGPK Unmodified 1637.8737 0.87368386 2228 Q13045 FLII Protein flightless-1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.893 64.98 2 5.6866E-05 74356 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 74.789 55.546 71865000 0 0 0 4173600 3388300 4788900 5121600 4140800 4224400 7576800 7494000 10695000 4445200 6583100 9234000 27286 2228 24909 229747;229748;229749;229750;229751;229752;229753;229754;229755;229756;229757;229758 182716;182717;182718;182719;182720;182721;182722;182723;182724;182725;182726 182716 11 LAGATLLIFANK Unmodified 1230.7336 0.73360855 1370 P36404 ARL2 ADP-ribosylation factor-like protein 2 yes yes 0 0 0 By MS/MS 10 0 1 1 86.745 86.904 2 0.011389 100457 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.368 38.148 3723300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3723300 27287 1370 24910 229759 182727 182727 1 LAGEELAGEEAPQEK Unmodified 1569.7522 0.75223132 3102 Q7Z4V5 HDGFRP2 Hepatoma-derived growth factor-related protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 44.364 43.023 2 1.2967E-83 48608 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 187.58 175.65 1652400000 22365000 985110000 0 36076000 39399000 34308000 43030000 47851000 42229000 43798000 60331000 79499000 47338000 60400000 110710000 27288 3102 24911 229760;229761;229762;229763;229764;229765;229766;229767;229768;229769;229770;229771;229772;229773;229774;229775 182728;182729;182730;182731;182732;182733;182734;182735;182736;182737;182738;182739;182740;182741;182742;182743;182744;182745 182742 18 LAGESESNLRK Unmodified 1202.6255 0.62551466 1755 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 6 2 24 2 4 2 2 2 2 2 2 2 2 2 2 2 2 2 15.545 14.779 2;3 7.0271E-27 13437 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 173.39 99.091 7485900000 1023800000 1449700000 2577000000 131480000 56989000 144550000 83244000 65732000 68823000 148210000 341020000 269730000 96266000 243960000 785340000 27289 1755 24912 229776;229777;229778;229779;229780;229781;229782;229783;229784;229785;229786;229787;229788;229789;229790;229791;229792;229793;229794;229795;229796;229797;229798;229799;229800;229801;229802;229803;229804;229805;229806;229807 182746;182747;182748;182749;182750;182751;182752;182753;182754;182755;182756;182757;182758;182759;182760;182761;182762;182763;182764;182765;182766;182767;182768;182769;182770;182771;182772;182773;182774 182753 26 LAGFELR Unmodified 804.44939 0.4493882 3384 Q8NB16 MLKL Mixed lineage kinase domain-like protein yes yes 0 0 0 By MS/MS By MS/MS By matching By matching 10 0 4 1 1 1 1 53.152 53.099 2 0.029815 61037 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 75.311 28.265 62257000 0 0 0 10431000 0 0 12810000 0 0 21658000 0 0 0 17359000 0 27290 3384 24913 229808;229809;229810;229811 182775 182775 1 LAGFLDLTEQEFR Unmodified 1537.7777 0.77765821 5084 Q9Y262 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 0 0 0 By MS/MS 10 0 1 1 90.17 90.309 2 0.0082396 104592 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.551 53.286 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27291 5084 24914 229812 182776 182776 1 LAGGAQHVR Unmodified 907.4988 0.49879801 4309 Q9GZV5 WWTR1 WW domain-containing transcription regulator protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 6.8528 7.0815 2 0.03885 4263 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.767 22.145 17172000 0 0 0 0 0 0 2935600 0 0 0 5594300 0 0 0 8642500 27292 4309 24915 229813;229814;229815 182777 182777 1 LAGGGVLGPAGLGPAQTPPYRPGPPDPPPPPR Unmodified 3052.6247 0.62467381 4999 Q9ULL5 PRR12 Proline-rich protein 12 yes yes 0 0 1 By matching By MS/MS By MS/MS By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 80.358 80.49 3 4.7433E-05 92931 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 28.405 22.502 34226000 0 0 0 0 0 3877700 0 4548900 0 7393100 0 6700000 0 3054300 8651900 27293 4999 24916 229816;229817;229818;229819;229820;229821 182778;182779;182780 182780 3 LAGGQTSQPTTPLTSPQR Unmodified 1838.9486 0.94863972 623 O95155 UBE4B Ubiquitin conjugation factor E4 B yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 45.377 45.704 2 2.3329E-33 51261 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 123.84 110.17 53083000 0 0 0 0 0 7224700 4505800 0 2143500 5846400 5763900 7834100 0 7124300 12641000 27294 623 24917 229822;229823;229824;229825;229826;229827;229828;229829;229830 182781;182782;182783;182784;182785;182786;182787;182788 182785 8 LAGGYENVPTVDIHMK Unmodified 1742.8662 0.86615564 414 O60568 PLOD3 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 70.745 71.052 3 0.011192 81089 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.692 22.904 19370000 0 0 0 0 0 0 0 0 0 0 2800100 4587800 0 2628300 9354100 27295 414 24918 229831;229832;229833;229834 182789 182789 1 LAGHFTQDK Unmodified 1015.5087 0.50869399 1627 P50542 PEX5 Peroxisomal targeting signal 1 receptor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.87 3 5 1 1 1 1 1 1 1 1 15.754 14.666 2 5.2567E-05 21829 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 153.04 121.75 118130000 91014000 6111600 7454000 0 0 0 0 0 1022800 0 2914200 3347600 3157100 0 3108600 27296 1627 24919 229835;229836;229837;229838;229839;229840;229841;229842 182790;182791;182792;182793 182791 4 LAGIENQSLDQTPQSHSSEQIQAIK Unmodified 2721.357 0.35695096 2406 Q14432 PDE3A cGMP-inhibited 3',5'-cyclic phosphodiesterase A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 63.912 63.97 3 4.4324E-51 72536 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 109.44 98.52 117820000 0 0 0 4239900 3916500 19081000 8075700 6652600 15248000 9828800 11882000 0 12462000 7497600 18935000 27297 2406 24920 229843;229844;229845;229846;229847;229848;229849;229850;229851;229852;229853 182794;182795;182796;182797;182798;182799;182800;182801;182802;182803;182804;182805;182806 182797 13 LAGIENQSLDQTPQSHSSEQIQAIKEEEEEK Unmodified 3494.6649 0.66487946 2406 Q14432 PDE3A cGMP-inhibited 3',5'-cyclic phosphodiesterase A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.89 64.978 4 1.034E-270 73792 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 214.78 207.01 338250000 0 0 0 4605800 11957000 26502000 10913000 21704000 34788000 49596000 37994000 52796000 17017000 20598000 49781000 27298 2406 24921 229854;229855;229856;229857;229858;229859;229860;229861;229862;229863;229864;229865 182807;182808;182809;182810;182811;182812;182813;182814;182815;182816;182817;182818;182819;182820 182811 14 LAGIINFQRPK Unmodified 1255.7401 0.74009091 130 O00232 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 2 1 1 1 1 1 2 1 1 2 64.588 64.725 2;3 0.0012982 73108 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.056 55.563 138120000 0 0 0 5868400 5152400 24316000 3906500 3393100 4732300 12837000 11371000 35773000 3994600 5632900 21142000 27299 130 24922 229866;229867;229868;229869;229870;229871;229872;229873;229874;229875;229876;229877;229878;229879;229880 182821;182822;182823;182824;182825;182826 182823 5 LAGIQEFQDK Unmodified 1147.5873 0.58733824 327 O43426 SYNJ1 Synaptojanin-1 yes yes 0 0 0 By MS/MS 2 0 1 1 59.329 53.486 2 0.013471 68888 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.37 78.649 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27300 327 24923 229881 182827 182827 1 LAGLALPR Unmodified 809.51232 0.51232281 4190 Q9BVJ7 DUSP23 Dual specificity protein phosphatase 23 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.285 65.373 2 0.0065503 74711 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 99.919 37.205 323100000 0 0 0 12596000 17518000 24755000 23136000 30297000 14454000 33284000 35035000 36168000 26907000 25526000 43427000 27301 4190 24924 229882;229883;229884;229885;229886;229887;229888;229889;229890;229891;229892;229893 182828;182829;182830;182831;182832;182833;182834;182835;182836;182837;182838;182839 182830 12 LAGLDITDASLR Unmodified 1243.6772 0.67721588 3457 Q8NHM5 KDM2B Lysine-specific demethylase 2B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 77.393 77.559 2 0.025034 89529 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 46.706 25.836 20544000 0 0 0 0 0 0 2786600 4205500 0 5463000 0 0 0 3613000 4475800 27302 3457 24925 229894;229895;229896;229897;229898 182840;182841 182841 2 LAGLDITDATLR Unmodified 1257.6929 0.69286595 5109 Q9Y2K7 KDM2A Lysine-specific demethylase 2A yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching 10 0 8 1 1 1 1 1 1 1 1 79.07 79.069 2 0.010467 91509 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 56.359 16.737 28331000 0 0 0 1796200 2344100 3109900 0 0 0 4784100 4896000 0 2996200 2822900 5581000 27303 5109 24926 229899;229900;229901;229902;229903;229904;229905;229906 182842;182843;182844;182845;182846 182846 5 LAGLEEALQK Unmodified 1070.5972 0.59717465 108 CON__Q9NSB4;Q9NSB4 KRT82 Keratin, type II cuticular Hb2 yes no 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 60.041 60.422 2 0.0057145 67890 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.838 16.103 + 47543000 0 0 0 0 0 0 0 24224000 0 0 0 0 0 0 23318000 27304 108 24927 229907;229908 182847;182848 182847 2 LAGLFNEQRK Unmodified 1174.6459 0.64585618 5206 Q9Y4L1 HYOU1 Hypoxia up-regulated protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.203 42.38 3 0.0013927 47545 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 60.398 36.106 140550000 0 0 0 7778200 4187200 12580000 8493400 7864300 5172400 10757000 14515000 20325000 12230000 11626000 25026000 27305 5206 24928 229909;229910;229911;229912;229913;229914;229915;229916;229917;229918;229919;229920 182849;182850;182851;182852;182853;182854;182855;182856;182857;182858;182859;182860 182849 12 LAGMEEEDLAFSTK Oxidation (M) 1555.7076 0.70758931 1089 P19447 ERCC3 TFIIH basal transcription factor complex helicase XPB subunit yes yes 0 1 0 By MS/MS 2 0 1 1 64.823 58.906 2 0.00071316 75391 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.962 57.936 14153000 0 14153000 0 0 0 0 0 0 0 0 0 0 0 0 0 27306 1089 24929 229921 182861 182861 1564 1 LAGMEEEDLAFSTK Unmodified 1539.7127 0.71267469 1089 P19447 ERCC3 TFIIH basal transcription factor complex helicase XPB subunit yes yes 0 0 0 By MS/MS 2 0 1 1 76.889 72.052 2 0.00099607 89913 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.112 69.773 25514000 0 25514000 0 0 0 0 0 0 0 0 0 0 0 0 0 27307 1089 24929 229922 182862 182862 1 LAGNEQVTR Unmodified 986.51451 0.51450765 1778 P56182 RRP1 Ribosomal RNA processing protein 1 homolog A yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 14.004 14.146 2 0.0064509 13224 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 75.043 45.942 14512000 0 0 0 1927700 2132700 2285900 0 0 755040 0 2062400 0 0 1992500 3355800 27308 1778 24930 229923;229924;229925;229926;229927;229928;229929 182863 182863 1 LAGPQLVQMFIGDGAK Oxidation (M) 1659.8654 0.86542736 1066 P17980 PSMC3 26S protease regulatory subunit 6A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 89.77 88.998 2 8.9136E-28 103697 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 133.32 108.47 110880000 10684000 0 0 1578600 7217800 12791000 3032200 3953900 0 27335000 19784000 23140000 1363000 0 0 27309 1066 24931 229930;229931;229932;229933;229934;229935;229936;229937;229938;229939;229940 182864;182865;182866;182867;182868;182869;182870;182871;182872;182873;182874 182873 1504 11 LAGPQLVQMFIGDGAK Unmodified 1643.8705 0.87051274 1066 P17980 PSMC3 26S protease regulatory subunit 6A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 95.577 93.66 2 1.5813E-10 116500 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 140.63 118.15 34746000 26543000 0 0 0 0 0 0 0 0 3207100 1802500 0 0 0 3193400 27310 1066 24931 229941;229942;229943;229944 182875;182876;182877;182878 182877 4 LAGPVPAR Unmodified 779.46537 0.46537261 3204 Q86Y56 DNAAF5 Dynein assembly factor 5, axonemal yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.44 27.638 2 0.011189 28446 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.496 39.543 459140000 0 0 0 26112000 25754000 45182000 32676000 35086000 26339000 43512000 43887000 59385000 33638000 35168000 52398000 27311 3204 24932 229945;229946;229947;229948;229949;229950;229951;229952;229953;229954;229955;229956 182879;182880;182881;182882;182883;182884;182885;182886;182887;182888 182882 9 LAGSLVTQAPISAR Unmodified 1382.7882 0.78816332 299 O43156 TTI1 TELO2-interacting protein 1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.503 64.592 2 0.0003954 73092 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.618 62.428 108710000 0 0 0 5578700 5996300 9207200 7782100 7457600 4095000 10592000 9283700 13153000 9322500 10475000 15764000 27312 299 24933 229957;229958;229959;229960;229961;229962;229963;229964;229965;229966;229967;229968 182889;182890;182891;182892;182893;182894;182895;182896;182897;182898;182899;182900;182901 182892 13 LAGTQPLEVLEAVQR Unmodified 1622.8992 0.89917033 1137 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 86.645 86.713 2;3 1.1305E-83 100339 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 188.06 118.03 851610000 0 0 0 8035900 21654000 48805000 28824000 32865000 25152000 81064000 91629000 108470000 31630000 78185000 295290000 27313 1137 24934 229969;229970;229971;229972;229973;229974;229975;229976;229977;229978;229979;229980;229981;229982;229983;229984;229985;229986;229987;229988;229989;229990;229991;229992 182902;182903;182904;182905;182906;182907;182908;182909;182910;182911;182912;182913;182914;182915;182916;182917;182918;182919;182920;182921;182922;182923 182906 21 LAGVTLGQR Unmodified 913.53451 0.53451481 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 43.075 43.254 2 0.0033336 47096 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.561 53.358 192450000 0 0 0 13357000 12096000 15437000 14183000 0 0 18921000 23009000 28614000 17557000 17621000 31650000 27314 1201 24935 229993;229994;229995;229996;229997;229998;229999;230000;230001;230002 182924;182925;182926;182927;182928;182929;182930;182931 182927 7 LAGYNALLR Unmodified 989.56581 0.56581494 2120 Q05BQ5 MBTD1 MBT domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 63.747 63.699 2 0.014504 72005 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 58.194 24.678 9368300 0 0 0 0 2032600 0 0 2943900 0 0 0 0 0 4391800 0 27315 2120 24936 230003;230004;230005;230006 182932;182933 182933 2 LAHEDAECEK Unmodified 1200.5081 0.50810164 4879 Q9UG63 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 1 2 2 2 2 2 1 2 2 2 6.5646 6.6948 2;3 3.3423E-06 4895 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 168.83 143.21 522270000 0 0 0 31816000 41594000 11825000 43280000 53719000 38977000 45602000 65679000 8179900 54562000 53379000 73653000 27316 4879 24937 230007;230008;230009;230010;230011;230012;230013;230014;230015;230016;230017;230018;230019;230020;230021;230022;230023;230024;230025;230026;230027;230028 182934;182935;182936;182937;182938;182939;182940;182941;182942;182943;182944;182945;182946;182947;182948;182949;182950 182942 13 LAHEIEALK Unmodified 1022.576 0.57604528 375 O43847 NRD1 Nardilysin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.919 37.099 2 0.0095883 41772 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 66.299 33.689 93626000 0 0 0 4112900 3057900 4471600 4230300 4031900 3188200 7773700 11069000 9714300 11595000 9291500 21090000 27317 375 24938 230029;230030;230031;230032;230033;230034;230035;230036;230037;230038;230039;230040 182951;182952;182953;182954;182955;182956 182955 6 LAHEVGWK Unmodified 938.4974 0.49740102 1415 P40429 RPL13A 60S ribosomal protein L13a yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 27.264 27.478 2 0.039356 29941 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 50.703 18.768 79406000 0 0 0 0 4579400 6096000 5720800 4790200 7033400 9218400 0 8875300 10076000 10461000 12556000 27318 1415 24939 230041;230042;230043;230044;230045;230046;230047;230048;230049;230050 182957;182958;182959 182959 3 LAHGLLEELK Unmodified 1121.6445 0.64445919 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 4 2 2 70.033 63.236 2 3.2721E-11 86747 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 161.79 107.63 76092000 34643000 41449000 0 0 0 0 0 0 0 0 0 0 0 0 0 27319 3641 24940 230051;230052;230053;230054 182960;182961;182962 182961 3 LAHMTARNENDFDEK Oxidation (M) 1805.8003 0.80026092 3303 Q8N108 MIER1 Mesoderm induction early response protein 1 yes yes 0 1 1 By MS/MS 2 0 1 1 21.933 17.114 3 1.3148E-06 24398 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 100.54 83.798 66820000 66820000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27320 3303 24941 230055 182963;182964 182963 4899 2 LAHMTARNENDFDEK Unmodified 1789.8053 0.8053463 3303 Q8N108 MIER1 Mesoderm induction early response protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 35.731 29.383 3 0.00031725 41165 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.022 53.418 19256000 19256000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27321 3303 24941 230056 182965;182966 182966 2 LAIHNPNLPTTLPVNSQNIQPVR Unmodified 2535.3922 0.39215468 2351 Q13887 KLF5 Krueppel-like factor 5 yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 79.884 80.03 3 1.3398E-13 92199 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.091 70.405 44048000 0 0 0 0 0 0 0 0 0 7766600 5743500 6848200 1893400 3794500 18001000 27322 2351 24942 230057;230058;230059;230060;230061;230062 182967 182967 1 LAILDQELEHK Unmodified 1307.7085 0.70851601 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 6 12 1 2 3 1 1 1 1 1 1 1 1 1 1 1 1 67.552 65.963 2;3 6.6985E-17 85867 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 164.64 134.83 270060000 10257000 111440000 47537000 3134600 3409600 7339900 5072700 4512400 4724100 8609200 10381000 12198000 10062000 11867000 19511000 27323 2203 24943 230063;230064;230065;230066;230067;230068;230069;230070;230071;230072;230073;230074;230075;230076;230077;230078;230079;230080 182968;182969;182970;182971;182972;182973;182974;182975;182976;182977;182978;182979;182980;182981 182972 13 LAILGIHNEVSK Unmodified 1292.7452 0.74523587 971 P12814 ACTN1 Alpha-actinin-1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 2 62.937 63.065 2;3 0.0050661 71586 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 41.644 19.598 120330000 0 0 0 6245700 3259900 9548100 0 0 4582400 7798600 12093000 20100000 5436700 10745000 40525000 27324 971 24944 230081;230082;230083;230084;230085;230086;230087;230088;230089;230090;230091 182982;182983;182984;182985 182985 3 LAILQVGNR Unmodified 982.59236 0.59236404 953 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 2 1 1 1 1 63.515 63.62 2 0.00508 71898 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.244 45.452 23589000 0 0 0 2587000 0 3458500 2836300 3542200 0 0 0 5278000 0 0 5887300 27325 953 24945 230092;230093;230094;230095;230096;230097;230098;230099;230100;230101 182986;182987;182988;182989;182990;182991;182992;182993;182994;182995 182989 10 LAILYAK Unmodified 790.49528 0.49527576 1625 P50502;Q8NFI4;Q8IZP2 ST13;ST13P5;ST13P4 Hsc70-interacting protein;Putative protein FAM10A5;Putative protein FAM10A4 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.212 56.338 2 0.02563 62871 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 80.377 32.135 946690000 0 0 0 36101000 35703000 33560000 53013000 59836000 32759000 89306000 120640000 119900000 40610000 109000000 216260000 27326 1625 24946 230102;230103;230104;230105;230106;230107;230108;230109;230110;230111;230112;230113 182996;182997;182998;182999;183000;183001;183002;183003;183004;183005;183006 183004 11 LAINLLAK Unmodified 854.55894 0.55893865 4423 Q9H6S3 EPS8L2 Epidermal growth factor receptor kinase substrate 8-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.646 74.711 2 0.023059 86098 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 60.648 14.766 81181000 0 0 0 2732500 3504000 8850000 5331100 3812100 3792100 10886000 7851900 7069600 4484000 8421700 14446000 27327 4423 24947 230114;230115;230116;230117;230118;230119;230120;230121;230122;230123;230124;230125 183007;183008 183007 2 LAINYDPLEK Unmodified 1174.6234 0.6233894 3134 Q86TC9 MYPN Myopalladin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 74.675 74.145 2 0.0011859 85025 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 108.98 84.823 666030000 0 83151000 0 36179000 38780000 38410000 43060000 59634000 42168000 50484000 51202000 67759000 43724000 43489000 67987000 27328 3134 24948 230126;230127;230128;230129;230130;230131;230132;230133;230134;230135;230136;230137;230138;230139 183009;183010;183011;183012;183013;183014;183015;183016;183017;183018;183019;183020 183014 10 LAIQGPEDSPSR Unmodified 1268.6361 0.63607935 2575 Q15773 MLF2 Myeloid leukemia factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 41.363 41.517 2 8.2072E-07 46522 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 114.4 78.457 204650000 0 0 0 21361000 13256000 15694000 18706000 16267000 0 28840000 23750000 30123000 0 0 36654000 27329 2575 24949 230140;230141;230142;230143;230144;230145;230146;230147;230148 183021;183022;183023;183024;183025;183026;183027;183028;183029;183030 183022 7 LAIQLLK Unmodified 797.53747 0.53747492 2756 Q5SRE5 NUP188 Nucleoporin NUP188 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 73.099 73.273 2 0.023344 84525 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 91.584 0 81931000 0 0 0 0 0 9824400 5116900 9436300 5804000 10949000 7252600 7342900 9036000 8068500 9100500 27330 2756 24950 230149;230150;230151;230152;230153;230154;230155;230156;230157;230158 183031;183032;183033;183034;183035;183036;183037;183038;183039 183031 9 LAISEDHVASVK Unmodified 1267.6772 0.67721588 4505 Q9HC35 EML4 Echinoderm microtubule-associated protein-like 4 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 2 1 1 1 41.22 41.48 2;3 0.0032804 45207 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.106 44.311 121530000 0 0 0 0 1449300 13913000 10006000 0 11528000 15757000 19901000 17679000 0 10239000 21059000 27331 4505 24951 230159;230160;230161;230162;230163;230164;230165;230166;230167;230168 183040;183041;183042;183043 183041 3 LAIVLFTK Unmodified 903.57934 0.57933974 3398 Q8NBN7 RDH13 Retinol dehydrogenase 13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 82.673 82.73 2 0.033014 95574 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 53.968 32.421 32493000 0 0 0 916230 1756700 2764600 2586800 2721700 3200700 2925100 2172200 3872800 0 0 9575900 27332 3398 24952 230169;230170;230171;230172;230173;230174;230175;230176;230177;230178 183044;183045;183046;183047;183048;183049 183046 6 LAIWDTAGQER Unmodified 1258.6306 0.63060004 4536 Q9NP72 RAB18 Ras-related protein Rab-18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 65.423 65.389 2 0.00047061 74684 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 84.213 48.701 48383000 0 0 0 5307400 4775000 0 6390500 7714000 4286500 0 11780000 0 8128800 0 0 27333 4536 24953 230179;230180;230181;230182;230183;230184;230185;230186;230187 183050;183051;183052;183053;183054;183055;183056 183053 6 LAKVETPLEEAIK Unmodified 1439.8235 0.82354577 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 0 1 By MS/MS 10 0 1 1 64.852 65.296 3 0.048346 74673 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 27.005 21.852 7226300 0 0 0 0 0 0 0 0 0 0 0 7226300 0 0 0 27334 4226 24954 230188 183057 183057 1 LALAGIGQPVK Unmodified 1065.6546 0.65462995 5009 Q9ULW0 TPX2 Targeting protein for Xklp2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67.902 66.996 2 0.00049927 77647 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 83.265 44.473 226690000 22564000 24539000 0 9372300 10854000 14002000 12431000 12730000 11675000 18159000 20680000 17009000 12617000 14378000 25677000 27335 5009 24955 230189;230190;230191;230192;230193;230194;230195;230196;230197;230198;230199;230200;230201;230202 183058;183059;183060;183061;183062;183063;183064;183065;183066;183067;183068 183068 11 LALALENEGYIK Unmodified 1332.7289 0.7289171 2748;2888 Q6IN85;Q5MIZ7 SMEK1;SMEK2 Serine/threonine-protein phosphatase 4 regulatory subunit 3A;Serine/threonine-protein phosphatase 4 regulatory subunit 3B no no 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 80.93 76.245 2 8.1607E-07 95284 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.45 114.82 245750000 18732000 218320000 8696500 0 0 0 0 0 0 0 0 0 0 0 0 27336 2888;2748 24956 230203;230204;230205;230206 183069;183070;183071;183072 183069 4 LALASLGYEK Unmodified 1063.5914 0.59136099 3549 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.5 0.5 2 2 1 2 1 72.514 68.184 2 0.0022808 83487 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 106.68 43.377 364290000 958850 332600000 30724000 0 0 0 0 0 0 0 0 0 0 0 0 27337 3549 24957 230207;230208;230209;230210 183073;183074;183075 183075 3 LALCLCMINFYHGGLK Unmodified 1908.9413 0.94125161 2484 Q15042 RAB3GAP1 Rab3 GTPase-activating protein catalytic subunit yes yes 0 0 0 By MS/MS 10 0 1 1 63.553 64.116 3 0.049094 72631 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 16.939 6.4716 6758600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6758600 27338 2484 24958 230211 183076 183076 1 LALDIEIATYRK Unmodified 1404.7977 0.79766537 67;77;69;88;51;99;107 CON__H-INV:HIT000292931;CON__P05787;P05787;CON__P19013;P19013;Q6KB66;CON__Q6KB66-1;CON__P08729;CON__Q3KNV1;P08729;CON__Q9DCV7 KRT8;KRT4;KRT80;KRT7 Keratin, type II cytoskeletal 8;Keratin, type II cytoskeletal 4;Keratin, type II cytoskeletal 80;Keratin, type II cytoskeletal 7 no no 0 0 1 By MS/MS 2 0 1 1 84.495 76.365 3 0.0017204 99737 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.435 58.048 + 7162100 7162100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27339 51;67;77;99;69;88;107 24959 230212 183077 183077 1 LALDLEIATYR Unmodified 1276.7027 0.70270235 780 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 88.274 84.022 2 0.013716 107001 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.067 0 + 10476000 6885600 0 0 3590200 0 0 0 0 0 0 0 0 0 0 0 27340 780 24960 230213;230214 183078;183079;183080 183078 3 LALDVEIATYRK Unmodified 1390.782 0.78201531 79;74;66;58;779;80;96;960;2056;83;53;105 CON__P35908v2;P35908;CON__P35908;P04259;CON__P50446;CON__Q8BGZ7;CON__Q01546;P12035;CON__P12035;Q01546;CON__P13647;P13647;CON__O95678;O95678;CON__P02538;P02538;CON__P04259;CON__Q5XKE5;Q5XKE5 KRT2;KRT6B;KRT3;KRT76;KRT5;KRT75;KRT6A;KRT79 Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 3;Keratin, type II cytoskeletal 2 oral;Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 79 no no 0 0 1 By MS/MS 2 0 1 1 80.451 72.32 3 0.00034114 94819 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.356 73.436 + 18758000 18758000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27341 79;779;80;105;83;960;2056;74;53;58;66;96 24961 230215 183081 183081 1 LALDYGIK Unmodified 891.50657 0.50656873 1824 P61006 RAB8A Ras-related protein Rab-8A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.68 1.57 1 24 1 2 2 2 2 2 2 2 2 2 2 2 2 61.6 61.547 2 0.015996 71565 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 67.981 0 1051200000 0 0 4226800 63239000 54958000 64001000 82556000 85842000 53355000 102990000 135180000 123320000 80690000 76584000 124260000 27342 1824 24962 230216;230217;230218;230219;230220;230221;230222;230223;230224;230225;230226;230227;230228;230229;230230;230231;230232;230233;230234;230235;230236;230237;230238;230239;230240 183082;183083;183084;183085;183086;183087 183087 6 LALEGLTEDK Unmodified 1087.5761 0.57610486 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 62.041 61.618 2 0.0049347 78586 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.258 58.836 155460000 0 63456000 0 6526900 4998800 5724100 7855600 7229400 5302900 7463000 0 12237000 11082000 7309700 16273000 27343 2446 24963 230241;230242;230243;230244;230245;230246;230247;230248;230249;230250;230251;230252 183088;183089;183090;183091;183092;183093 183089 6 LALEGVEK Unmodified 857.48583 0.48583328 2549 Q15555 MAPRE2 Microtubule-associated protein RP/EB family member 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 46.507 40.848 2 0.02908 53260 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.058 26.426 279820000 4494900 271850000 3475400 0 0 0 0 0 0 0 0 0 0 0 0 27344 2549 24964 230253;230254;230255 183094 183094 1 LALEQQQLICK Unmodified 1342.7279 0.72787125 3249 Q8IWX8 CHERP Calcium homeostasis endoplasmic reticulum protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 62.696 62.023 2 3.682E-09 78975 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 135.71 95.644 280040000 0 154890000 0 5798300 7831600 7207900 8461200 8851200 6605800 10132000 12562000 12431000 15127000 13057000 17081000 27345 3249 24965 230256;230257;230258;230259;230260;230261;230262;230263;230264;230265;230266;230267;230268;230269 183095;183096;183097;183098;183099;183100;183101;183102;183103 183097 8 LALETTVLVESYTLPDGRIIK Unmodified 2330.3097 0.30971341 1836 P61160 ACTR2 Actin-related protein 2 yes yes 0 0 1 By MS/MS 2 0 1 1 96.407 88.277 3 9.7843E-08 114108 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.21 57.618 21214000 21214000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27346 1836 24966 230270 183104 183104 1 LALFQAIGK Unmodified 959.5804 0.58040237 1802 P58107 EPPK1 Epiplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.463 79.524 2 0.021439 92011 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 52.268 17.068 122300000 0 0 0 9672200 8003600 12074000 8116700 9685800 7542900 9666300 8984400 16494000 9563900 9564300 12927000 27347 1802 24967 230271;230272;230273;230274;230275;230276;230277;230278;230279;230280;230281;230282 183105;183106;183107 183107 3 LALGDDSPALK Unmodified 1098.5921 0.59208927 1049 P17174 GOT1 Aspartate aminotransferase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 56.239 55.458 2 0.001453 63895 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 72.643 31.195 160560000 0 10394000 0 7973600 0 0 0 0 0 0 31149000 30549000 0 17415000 63085000 27348 1049 24968 230283;230284;230285;230286;230287;230288 183108;183109;183110;183111;183112;183113;183114;183115 183115 8 LALGDDSPALKEK Unmodified 1355.7296 0.72964538 1049 P17174 GOT1 Aspartate aminotransferase, cytoplasmic yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 12.181 12.299 3 0.012794 11328 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 28.327 6.0953 144940000 0 0 0 6382000 6330300 20918000 8420400 7509800 8273500 15390000 0 17150000 11138000 7181800 36244000 27349 1049 24969 230289;230290;230291;230292;230293;230294;230295;230296;230297;230298;230299 183116;183117;183118;183119;183120;183121;183122;183123;183124;183125;183126 183118 9 LALGIPLPELR Unmodified 1190.7387 0.73869393 1224 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 92.541 92.647 2 0.0047039 107373 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.828 51.435 23136000 0 0 0 0 760030 1200200 670190 1224100 965900 3314600 2128900 1704500 738350 2106000 8323000 27350 1224 24970 230300;230301;230302;230303;230304;230305;230306;230307;230308;230309;230310 183127;183128;183129;183130 183128 3 LALGQINIAK Unmodified 1039.639 0.63897988 4263 Q9BZE4 GTPBP4 Nucleolar GTP-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 73.317 72.586 2 0.00083961 83626 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 118.89 88.258 223360000 32763000 0 0 0 15156000 15937000 12405000 0 13730000 24054000 25223000 31209000 28238000 24650000 0 27351 4263 24971 230311;230312;230313;230314;230315;230316;230317;230318;230319;230320 183131;183132;183133;183134;183135;183136;183137;183138;183139;183140 183139 9 LALGSFVEEYNNK Unmodified 1482.7355 0.73545904 1864 P61962 DCAF7 DDB1- and CUL4-associated factor 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.758 79.817 2 5.7967E-08 92054 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 121.83 84.639 178960000 0 0 0 5395400 7498700 12065000 9597000 13091000 11615000 17702000 17246000 21820000 11102000 12935000 38897000 27352 1864 24972 230321;230322;230323;230324;230325;230326;230327;230328;230329;230330;230331;230332 183141;183142;183143;183144;183145;183146;183147;183148;183149;183150;183151;183152 183143 11 LALHLSEIPNQK Unmodified 1361.7667 0.76669959 2870 Q6DHV7 ADAL Adenosine deaminase-like protein yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 71.833 65.927 3 0.00038686 87372 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.695 58.675 46311000 43968000 0 2342700 0 0 0 0 0 0 0 0 0 0 0 0 27353 2870 24973 230333;230334 183153;183154 183154 2 LALHNFG Unmodified 770.40752 0.40752338 1867 P61970 NUTF2 Nuclear transport factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 50.023 49.225 2 0.025571 54666 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 80.498 80.498 530510000 93332000 0 46914000 29502000 5456900 12172000 14423000 11945000 0 12461000 46837000 53603000 12794000 42582000 148490000 27354 1867 24974 230335;230336;230337;230338;230339;230340;230341;230342;230343;230344;230345;230346;230347 183155;183156;183157;183158;183159;183160;183161 183161 7 LALIQPSREQVQR Unmodified 1536.8736 0.87362428 1972 P78330 PSPH Phosphoserine phosphatase yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 49.978 49.979 3 0.0025619 55013 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.209 23.797 60257000 0 0 0 4863900 3755100 0 3951900 5329100 0 0 0 0 0 8362600 33995000 27355 1972 24975 230348;230349;230350;230351;230352;230353 183162;183163 183162 2 LALLGLAQPSEK Unmodified 1238.7234 0.72343779 5210 Q9Y4U1 MMACHC Methylmalonic aciduria and homocystinuria type C protein yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.034 79.093 2 0.014471 91929 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 74.162 59.011 159770000 0 0 0 6482300 7660800 14604000 11540000 9149100 12841000 16124000 17340000 17155000 12089000 12982000 21807000 27356 5210 24976 230354;230355;230356;230357;230358;230359;230360;230361;230362;230363;230364;230365 183164;183165 183165 1 LALLHEGTGPR Unmodified 1162.6459 0.64585618 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 2 2 3 1 2 1 1 2 2 1 43.811 43.898 2;3 0.0030734 49766 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 51.013 30.143 467680000 0 0 0 30557000 22531000 42790000 30178000 35276000 19745000 49881000 46851000 41880000 52704000 46981000 48310000 27357 5071 24977 230366;230367;230368;230369;230370;230371;230372;230373;230374;230375;230376;230377;230378;230379;230380;230381;230382;230383;230384;230385;230386 183166;183167;183168;183169;183170;183171;183172;183173;183174;183175;183176;183177;183178;183179;183180 183178 12 LALLNEK Unmodified 799.48035 0.48035398 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 46.989 47.131 2 0.023501 51972 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 84.699 21.551 49046000 0 0 0 0 5439600 6504600 6921600 6005200 4870300 0 0 10178000 9125900 0 0 27358 2459 24978 230387;230388;230389;230390;230391;230392;230393 183181 183181 1 LALLQEERDK Unmodified 1213.6667 0.6666512 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching 10 0 14 2 2 1 1 1 1 1 1 1 1 1 1 42.21 42.288 3 0.0092675 48163 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 51.436 32.764 144420000 0 0 0 9438400 8446000 9973800 12925000 7917200 7476000 14938000 16340000 12274000 16301000 11588000 16803000 27359 2446 24979 230394;230395;230396;230397;230398;230399;230400;230401;230402;230403;230404;230405;230406;230407 183182;183183;183184;183185;183186;183187;183188 183188 3 LALLSVTTGGTAEMYTK Oxidation (M) 1770.9074 0.90735175 1032 P16083 NQO2 Ribosyldihydronicotinamide dehydrogenase [quinone] yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 82.361 77.691 2 6.009E-36 98796 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 132.79 118.99 135950000 71187000 55363000 9397500 0 0 0 0 0 0 0 0 0 0 0 0 27360 1032 24980 230408;230409;230410;230411 183189;183190;183191;183192 183191 1457 4 LALLSVTTGGTAEMYTK Unmodified 1754.9124 0.91243713 1032 P16083 NQO2 Ribosyldihydronicotinamide dehydrogenase [quinone] yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 87.564 80.94 2 1.3757E-18 103880 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 150.49 139.54 35760000 35760000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27361 1032 24980 230412;230413;230414 183193;183194;183195 183194 3 LALPADIR Unmodified 867.5178 0.51780212 2465 Q14CX7 NAA25 N-alpha-acetyltransferase 25, NatB auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 64.888 65.045 2 0.011282 74330 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 77.282 37.179 1661900000 0 0 0 0 2021500 6346300 536590000 544320000 443280000 26688000 35784000 49726000 3817400 4428000 8944700 27362 2465 24981 230415;230416;230417;230418;230419;230420;230421;230422;230423;230424;230425 183196;183197;183198;183199;183200;183201;183202;183203;183204 183202 9 LALPADSVNIK Unmodified 1139.655 0.65502388 3704 Q93034 CUL5 Cullin-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 69.949 69.324 2 0.00432 87584 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.755 48.995 432920000 0 378960000 2947600 0 0 7330200 4185100 2768800 0 5013400 6748600 6800600 0 6091500 12069000 27363 3704 24982 230426;230427;230428;230429;230430;230431;230432;230433;230434;230435 183205;183206;183207;183208 183207 3 LALPPATK Unmodified 809.50109 0.50108942 869 P08651 NFIC Nuclear factor 1 C-type yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 42.904 43.059 2 0.034963 47757 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 52.786 33.347 9103900 0 0 0 0 0 0 2833500 0 1013300 0 0 0 0 5257000 0 27364 869 24983 230436;230437;230438 183209 183209 1 LALPPYLTPDAR Unmodified 1325.7343 0.73433683 4854 Q9UBS0 RPS6KB2 Ribosomal protein S6 kinase beta-2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 83.205 83.242 2 0.0057565 96586 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 51.927 41.097 141010000 0 0 0 6675200 8795100 17602000 12092000 12479000 10902000 20341000 0 20660000 16896000 14563000 0 27365 4854 24984 230439;230440;230441;230442;230443;230444;230445;230446;230447;230448 183210 183210 1 LALQALTEK Unmodified 985.5808 0.5807963 2135 Q07065 CKAP4 Cytoskeleton-associated protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.57 61.67 2 0.003452 69368 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 104.06 59.94 188720000 0 0 0 17719000 13819000 13201000 11898000 12836000 10226000 16085000 15644000 25677000 15316000 12504000 23797000 27366 2135 24985 230449;230450;230451;230452;230453;230454;230455;230456;230457;230458;230459;230460 183211;183212;183213;183214;183215;183216;183217;183218;183219;183220;183221;183222;183223 183214 13 LALQEEPDHSK Unmodified 1265.6252 0.62518031 1636 P50748 KNTC1 Kinetochore-associated protein 1 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 26.043 26.209 2 0.032637 28289 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 45.137 36.224 1966400 0 0 0 0 0 1166000 0 0 0 0 0 0 0 800360 0 27367 1636 24986 230461;230462 183224 183224 1 LALQLHPDRNPDDPQAQEK Unmodified 2184.0923 0.092343841 4855 Q9UBS4 DNAJB11 DnaJ homolog subfamily B member 11 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.06 2.58 2 15 1 1 1 1 1 1 1 1 1 2 2 2 2 49.624 49.067 3;4 1.3629E-08 53822 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.709 70.581 439100000 110970000 14715000 0 0 7922600 17749000 10856000 14031000 24592000 14406000 27795000 50973000 25883000 35679000 83530000 27368 4855 24987 230463;230464;230465;230466;230467;230468;230469;230470;230471;230472;230473;230474;230475;230476;230477;230478;230479 183225;183226;183227;183228;183229;183230;183231;183232;183233;183234;183235;183236;183237;183238;183239;183240 183229 15 LALQWHPDNFQNEEEK Unmodified 1996.9279 0.92790427 2254 Q13217 DNAJC3 DnaJ homolog subfamily C member 3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching 9 2.65 1 7 1 1 1 1 1 1 1 1 72.523 71.662 3 0.00015144 93019 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.898 64.079 58741000 19291000 0 0 0 0 4153400 1905200 5966100 3216600 1546900 4464500 0 0 0 18197000 27369 2254 24988 230480;230481;230482;230483;230484;230485;230486;230487 183241;183242;183243 183242 3 LALSDFEK Unmodified 921.48075 0.48074791 1636 P50748 KNTC1 Kinetochore-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 6 4 3 3 1 1 1 1 1 1 68.903 65.901 2 0.012704 83770 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.997 46.313 228880000 10648000 197580000 5938200 0 4666800 8110300 1936900 0 0 0 0 0 0 0 0 27370 1636 24989 230488;230489;230490;230491;230492;230493 183244;183245;183246;183247 183247 4 LALSIPAEK Unmodified 940.55933 0.55933258 4264 Q9BZF9 UACA Uveal autoantigen with coiled-coil domains and ankyrin repeats yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65.888 64.963 2 0.0051666 74417 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 81.548 53.33 143580000 3094400 59093000 0 6028300 4980300 4405800 6172600 4769800 6445300 8214000 9209200 10285000 6613300 7173500 7098500 27371 4264 24990 230494;230495;230496;230497;230498;230499;230500;230501;230502;230503;230504;230505;230506;230507 183248;183249;183250;183251;183252;183253;183254;183255;183256;183257;183258;183259;183260 183255 13 LALSMLGQSDAYGAADAR Oxidation (M) 1824.8676 0.8676122 1627 P50542 PEX5 Peroxisomal targeting signal 1 receptor yes yes 0 1 0 By MS/MS 10 0 1 1 70.514 70.862 2 2.4376E-05 81458 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 61.11 44.478 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27372 1627 24991 230508 183261 183261 2607 1 LALSPSPR Unmodified 839.4865 0.48650199 4668 Q9NVH2 INTS7 Integrator complex subunit 7 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.831 37.013 2 0.006803 41187 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 96.19 71.992 102530000 0 0 0 4928200 6913600 8732200 7251500 7606400 5470900 11439000 7937500 9576800 12438000 8779800 11454000 27373 4668 24992 230509;230510;230511;230512;230513;230514;230515;230516;230517;230518;230519;230520 183262;183263;183264;183265 183262 4 LALSQNQQSSGAAGPTGK Unmodified 1713.8646 0.86457574 630 O95232 LUC7L3 Luc7-like protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 2 2 2 2 2 2 2 2 2 2 1 32.813 32.993 2;3 1.0382E-61 35939 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 196.11 172.26 617590000 0 0 0 24630000 42715000 51705000 49126000 48843000 35081000 70357000 70489000 66104000 51887000 52465000 54185000 27374 630 24993 230521;230522;230523;230524;230525;230526;230527;230528;230529;230530;230531;230532;230533;230534;230535;230536;230537;230538;230539;230540;230541;230542 183266;183267;183268;183269;183270;183271;183272;183273;183274;183275;183276;183277;183278;183279;183280;183281 183276 16 LALSQNQQSSGAAGPTGKNEEK Unmodified 2214.0877 0.087652394 630 O95232 LUC7L3 Luc7-like protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 27.701 27.93 3 2.2922E-26 29552 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 96.379 82.547 68491000 0 0 0 7439200 5723400 0 9981000 0 0 5292500 8620200 11054000 7027900 6040000 7312200 27375 630 24994 230543;230544;230545;230546;230547;230548;230549;230550;230551 183282;183283;183284;183285;183286;183287;183288;183289;183290;183291;183292;183293;183294 183290 13 LALSSVDASEQTEWQQLVDDAK Unmodified 2432.1707 0.17071332 1636 P50748 KNTC1 Kinetochore-associated protein 1 yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 93.277 88.94 2;3 7.4949E-89 110534 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 206.2 191.77 69266000 0 69266000 0 0 0 0 0 0 0 0 0 0 0 0 0 27376 1636 24995 230552;230553;230554 183295;183296 183295 2 LALVISELEGK Unmodified 1170.686 0.68598966 2204 Q12899 TRIM26 Tripartite motif-containing protein 26 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 83.317 83.418 2 0.00026232 96117 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 109.29 76.45 55838000 0 0 0 0 2126300 5154800 2780100 3230900 5274500 9259400 7999100 0 4117800 0 15895000 27377 2204 24996 230555;230556;230557;230558;230559;230560;230561;230562;230563;230564 183297;183298;183299;183300;183301;183302;183303;183304 183298 8 LALVNNLQIVDSK Unmodified 1425.8191 0.81912909 4807 Q9P260 KIAA1468 LisH domain and HEAT repeat-containing protein KIAA1468 yes yes 0 0 0 By MS/MS 2 0 1 1 85.767 77.636 2 0.022258 101308 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.069 53.402 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27378 4807 24997 230565 183305 183305 1 LALVNNTQPK Unmodified 1096.6241 0.6240581 2947 Q6PGP7 TTC37 Tetratricopeptide repeat protein 37 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 39.887 38.912 2 0.0027014 52270 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.72 43.117 266120000 33293000 152290000 0 3080000 4070500 6489300 5530100 3634400 2626700 7399700 11295000 9171400 6605000 5581400 15045000 27379 2947 24998 230566;230567;230568;230569;230570;230571;230572;230573;230574;230575;230576;230577;230578;230579;230580 183306;183307;183308;183309;183310;183311;183312;183313;183314;183315;183316;183317;183318 183313 11 LALYTACGGMNPQECLPVILDVGTENEELLK Oxidation (M) 3462.6721 0.67207879 1534 P48163 ME1 NADP-dependent malic enzyme yes yes 0 1 0 By MS/MS 2 0 1 1 98.738 94.004 3 3.0851E-10 116342 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 49.888 44.047 9608000 0 9608000 0 0 0 0 0 0 0 0 0 0 0 0 0 27380 1534 24999 230581 183319 183319 2438 1 LAMAALQEK Unmodified 973.52665 0.52665224 4363 Q9H2D6 TRIOBP TRIO and F-actin-binding protein yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 47.041 47.291 2 0.030755 53879 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 48.036 26.748 38536000 0 0 0 0 3661200 2678300 3135500 0 0 3785000 5379600 5261800 5034600 3414500 6185100 27381 4363 25000 230582;230583;230584;230585;230586;230587;230588;230589;230590 183320 183320 1 LAMAIPDK Unmodified 857.46807 0.46807473 2101 Q04446 GBE1 1,4-alpha-glucan-branching enzyme yes yes 0 0 0 By matching By matching By matching By MS/MS By matching 10 0 5 1 1 1 1 1 6.0614 6.1787 2 0.022027 4200 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 61.494 2.8076 9819400 0 0 0 0 0 1303100 0 1751200 0 2387800 0 2810600 1566700 0 0 27382 2101 25001 230591;230592;230593;230594;230595 183321 183321 1 LAMDEIFQK Unmodified 1093.5478 0.54778161 2869 Q6DD88 ATL3 Atlastin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.315 75.374 2 0.0061887 86847 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 75.738 50.815 81481000 0 0 0 3897500 4044500 6340500 5239700 5965700 3825600 7448000 7099300 8934800 6892400 7103200 14689000 27383 2869 25002 230596;230597;230598;230599;230600;230601;230602;230603;230604;230605;230606;230607 183322;183323;183324;183325;183326;183327;183328;183329;183330 183327 9 LAMEQEQMGK Unmodified 1163.5315 0.53147962 4293 Q9C0J8 WDR33 pre-mRNA 3' end processing protein WDR33 yes yes 0 0 0 By MS/MS 2 0 1 1 34.673 29.917 2 0.016255 39855 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.507 36.943 24891000 0 24891000 0 0 0 0 0 0 0 0 0 0 0 0 0 27384 4293 25003 230608 183331 183331 1 LAMLEEDLLALK Oxidation (M) 1373.7476 0.74760363 2900 Q6NVY1 HIBCH 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial yes yes 0 1 0 By MS/MS 2 0 1 1 93.702 88.806 2 0.041586 110255 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 51.872 32.601 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27385 2900 25004 230609 183332 183332 1 LAMLSGILLGNGTLPATILTSLFTDSLVK Unmodified 2958.6715 0.67153215 5280 Q9Y6E2 BZW2 Basic leucine zipper and W2 domain-containing protein 2 yes yes 0 0 0 By MS/MS 3 0 1 1 106.61 102.94 3 1.5198E-11 123780 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 68.074 65.85 4823300 0 4823300 0 0 0 0 0 0 0 0 0 0 0 0 0 27386 5280 25005 230610 183333 183333 1 LAMQEFMILPVGAANFR 2 Oxidation (M) 1938.9696 0.96957485 827 P06733 ENO1 Alpha-enolase yes yes 0 2 0 By matching By MS/MS 10 0 2 1 1 88.982 89.147 2 0.00018085 103560 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.175 51.568 24650000 0 0 0 0 0 0 0 0 0 0 12329000 12321000 0 0 0 27387 827 25006 230611;230612 183334 183334 995;996 1 LAMQLEEQASR Oxidation (M) 1290.6238 0.6238001 4043 Q99661 KIF2C Kinesin-like protein KIF2C yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 32.952 32.887 2 1.82E-05 36132 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 119.68 101.46 38343000 0 0 0 6572800 7787600 9061100 7812900 0 0 0 7109000 0 0 0 0 27388 4043 25007 230613;230614;230615;230616;230617;230618;230619;230620;230621 183335;183336;183337;183338;183339;183340;183341;183342;183343 183335 5546 8 LAMQLEEQASR Unmodified 1274.6289 0.62888548 4043 Q99661 KIF2C Kinesin-like protein KIF2C yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 49.119 49.339 2 0.00028295 55701 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 93.096 71.01 169980000 0 0 0 0 9321000 17776000 13179000 8989100 14770000 25928000 14358000 18182000 0 19025000 28456000 27389 4043 25007 230622;230623;230624;230625;230626;230627;230628;230629;230630;230631 183344;183345;183346;183347;183348;183349;183350;183351 183348 8 LAMTGAGIDR Oxidation (M) 1019.507 0.50697943 3613 Q92523 CPT1B Carnitine O-palmitoyltransferase 1, muscle isoform yes yes 0 1 0 By MS/MS 10 0 1 1 11.462 11.846 2 0.0046013 10037 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.565 15.717 3215300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3215300 27390 3613 25008 230632 183352 183352 5108 1 LANEERDAENPDEPK Unmodified 1725.7806 0.78057134 4370 Q9H2M9 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 19.322 18.639 2;3 8.045E-05 19104 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 71.98 57.896 217420000 4796300 26886000 0 12306000 9898500 20031000 14223000 14340000 19685000 17337000 14249000 19721000 15097000 10047000 18806000 27391 4370 25009 230633;230634;230635;230636;230637;230638;230639;230640;230641;230642;230643;230644;230645;230646;230647 183353;183354;183355;183356;183357;183358;183359;183360;183361;183362 183356 8 LANEGACNEPVLRR Unmodified 1597.7995 0.79947306 4823 Q9P2N6 KANSL3 KAT8 regulatory NSL complex subunit 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 34.039 34.279 3 0.00074348 37588 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 40.552 27.415 44043000 0 0 0 0 4972400 0 4422200 3885800 3641100 3788700 0 7605900 5951400 4633300 5142500 27392 4823 25010 230648;230649;230650;230651;230652;230653;230654;230655;230656 183363;183364;183365;183366;183367;183368;183369 183363 7 LANELPDWFQTAK Unmodified 1531.7671 0.76709352 4867 Q9UDY2 TJP2 Tight junction protein ZO-2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 88.891 85.226 2 0.0031955 106003 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.187 68.528 49599000 0 48580000 1018600 0 0 0 0 0 0 0 0 0 0 0 0 27393 4867 25011 230657;230658 183370 183370 1 LANGLGREEAVAEGAR Unmodified 1611.8329 0.83288168 3213 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 2 1 2 2 42.148 42.291 2;3 1.8837E-31 47486 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 147.24 128.03 549890000 0 0 0 29588000 35982000 43016000 51001000 38670000 44592000 68106000 62033000 10905000 55239000 38621000 72140000 27394 3213 25012 230659;230660;230661;230662;230663;230664;230665;230666;230667;230668;230669;230670;230671;230672;230673;230674;230675;230676;230677;230678;230679;230680;230681 183371;183372;183373;183374;183375;183376;183377;183378;183379;183380;183381;183382;183383;183384 183371 12 LANGLGREEAVAEGARR Unmodified 1767.934 0.93399271 3213 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 25 2 2 2 2 2 2 3 2 2 2 2 2 37.927 38.106 3;4 0.0097511 42112 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 44.252 21.777 360620000 0 0 0 16801000 12649000 19510000 28499000 35915000 26007000 32195000 28020000 71646000 22102000 22549000 44730000 27395 3213 25013 230682;230683;230684;230685;230686;230687;230688;230689;230690;230691;230692;230693;230694;230695;230696;230697;230698;230699;230700;230701;230702;230703;230704;230705;230706 183385;183386;183387;183388;183389;183390;183391;183392;183393;183394 183388 5 LANGLPLGR Unmodified 909.5396 0.53960019 4683 Q9NVU0 POLR3E DNA-directed RNA polymerase III subunit RPC5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 2 1 1 1 52.203 52.46 2 0.0051747 59505 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 81.297 57.324 95481000 0 0 0 0 4081600 7636600 5130800 4953700 3807500 7397300 6821500 32382000 8075000 5473900 9720700 27396 4683 25014 230707;230708;230709;230710;230711;230712;230713;230714;230715;230716;230717;230718 183395;183396;183397;183398;183399;183400;183401;183402;183403;183404;183405 183397 11 LANIDEEMLQK Unmodified 1302.649 0.64895222 1733 P54136 RARS Arginine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.01 62.11 2 4.1749E-05 70812 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 136.57 123.52 199920000 0 0 0 9144600 13287000 16414000 15308000 12836000 9060500 15965000 31439000 20786000 12898000 10485000 32300000 27397 1733 25015 230719;230720;230721;230722;230723;230724;230725;230726;230727;230728;230729;230730 183406;183407;183408;183409;183410;183411;183412;183413;183414;183415;183416;183417;183418;183419 183411 14 LANIDEEMLQK Oxidation (M) 1318.6439 0.64386684 1733 P54136 RARS Arginine--tRNA ligase, cytoplasmic yes yes 0 1 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.086 45.258 2 0.00080215 50578 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 74.267 54.48 108780000 0 0 0 6905500 5541400 12905000 7918700 6930600 5175800 8559600 12212000 15747000 7472100 7409300 11999000 27398 1733 25015 230731;230732;230733;230734;230735;230736;230737;230738;230739;230740;230741;230742 183420;183421;183422;183423;183424 183421 2812 5 LANLHQK Unmodified 822.47119 0.47118627 3489 Q8TCG1 KIAA1524 Protein CIP2A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 9.9899 6.7054 2 0.018034 8823 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 116 23.719 207600000 176270000 17428000 13899000 0 0 0 0 0 0 0 0 0 0 0 0 27399 3489 25016 230743;230744;230745;230746 183425;183426;183427;183428 183428 4 LANLINAEER Unmodified 1141.6091 0.60913632 1694 P52701 MSH6 DNA mismatch repair protein Msh6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.163 51.3 2 0.005704 57874 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 67.881 38.464 187280000 0 0 0 9472200 11741000 18455000 13022000 10661000 12918000 20140000 21734000 19512000 0 17063000 32559000 27400 1694 25017 230747;230748;230749;230750;230751;230752;230753;230754;230755;230756;230757;230758 183429;183430;183431;183432;183433;183434;183435;183436;183437;183438;183439;183440 183430 12 LANLINAEERR Unmodified 1297.7102 0.71024735 1694 P52701 MSH6 DNA mismatch repair protein Msh6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 43.152 43.341 3 6.2908E-06 48151 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 110.66 62.222 408060000 0 0 0 0 17180000 45879000 32138000 29169000 26369000 65400000 52659000 0 51144000 33479000 54642000 27401 1694 25018 230759;230760;230761;230762;230763;230764;230765;230766;230767;230768 183441;183442;183443;183444;183445;183446;183447;183448;183449;183450;183451;183452;183453;183454;183455 183450 14 LANLINAEERRDVSLK Unmodified 1840.0167 0.016659702 1694 P52701 MSH6 DNA mismatch repair protein Msh6 yes yes 0 0 2 By MS/MS 2 0 1 1 70.03 61.744 4 0.026961 82363 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 35.303 24.516 5771000 5771000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27402 1694 25019 230769 183456 183456 0 LANLPEEVIQK Unmodified 1252.7027 0.70270235 1694 P52701 MSH6 DNA mismatch repair protein Msh6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 67.454 67.104 2 3.7368E-09 85315 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 158.76 135.68 942010000 0 147640000 0 39503000 41725000 72925000 57646000 48799000 45594000 86750000 79677000 84066000 66229000 59120000 112340000 27403 1694 25020 230770;230771;230772;230773;230774;230775;230776;230777;230778;230779;230780;230781;230782 183457;183458;183459;183460;183461;183462;183463;183464;183465;183466;183467;183468;183469 183460 4 LANNGTVLR Unmodified 956.54033 0.54032847 2797 Q5TFE4 NT5DC1 5'-nucleotidase domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 26.23 26.446 2 0.0036824 27589 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 95.741 54.439 42069000 0 0 0 1858300 1805400 3642600 0 0 0 3283200 7791800 7897200 0 4205200 11586000 27404 2797 25021 230783;230784;230785;230786;230787;230788;230789;230790;230791;230792 183470;183471;183472;183473;183474;183475;183476;183477 183476 8 LANNPDIVK Unmodified 982.54475 0.54474515 5068 Q9UQ84 EXO1 Exonuclease 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 31.539 31.678 2 0.0095702 34270 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 66.351 12.797 113610000 0 0 0 4756500 7704700 10604000 7556500 8763100 5528500 14356000 14491000 17828000 11124000 10897000 0 27405 5068 25022 230793;230794;230795;230796;230797;230798;230799;230800;230801;230802;230803 183478;183479;183480;183481;183482 183480 5 LANQAADYFGDAFK Unmodified 1529.7151 0.71505795 3549 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.56 3.62 4 1 11 1 3 1 1 1 1 1 1 1 1 1 1 1 1 79.868 78.439 2;3 7.6933E-44 97320 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 168.85 161.9 941070000 37784000 704540000 15309000 6989900 7646500 24224000 0 13615000 11200000 22435000 16884000 27230000 9532100 11934000 31747000 27406 3549 25023 230804;230805;230806;230807;230808;230809;230810;230811;230812;230813;230814;230815;230816;230817;230818;230819 183483;183484;183485;183486;183487;183488;183489;183490;183491;183492;183493;183494;183495;183496;183497;183498;183499 183485 17 LANQDEGPEDEEDEVPK Unmodified 1912.8174 0.81741035 2921 Q6P1N0 CC2D1A Coiled-coil and C2 domain-containing protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 40.488 40.734 2 6.1574E-05 44444 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.479 72.965 30514000 0 0 0 0 1721800 2974600 2755900 0 2160600 4880000 2935300 4141300 2170200 0 6774700 27407 2921 25024 230820;230821;230822;230823;230824;230825;230826;230827;230828 183500;183501 183501 2 LANQDEGPEDEEDEVPKK Unmodified 2040.9124 0.91237337 2921 Q6P1N0 CC2D1A Coiled-coil and C2 domain-containing protein 1A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 32.427 31.505 3 1.6086E-06 35050 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 73.168 69.728 95383000 12489000 16988000 0 6961800 5921700 5842300 6024600 5516800 6041700 0 14792000 0 5239100 0 9565800 27408 2921 25025 230829;230830;230831;230832;230833;230834;230835;230836;230837;230838;230839 183502;183503;183504;183505;183506;183507;183508;183509;183510 183510 9 LANQFAIYK Unmodified 1066.5811 0.58113065 1464 P42704 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 58.772 59.042 2 0.021439 67360 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 52.268 33.486 19052000 0 0 0 0 0 3372300 0 0 0 2301000 5073000 0 0 3116900 5188500 27409 1464 25026 230840;230841;230842;230843;230844 183511 183511 1 LANRAPEPTPQQVAQQQ Unmodified 1874.9599 0.9598731 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 41.55 41.728 2;3 8.1285E-37 46515 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 140.91 127.24 770030000 0 0 0 46467000 40552000 54938000 59943000 52636000 41830000 71261000 106540000 80639000 70225000 58305000 86694000 27410 2451 25027 230845;230846;230847;230848;230849;230850;230851;230852;230853;230854;230855;230856;230857;230858;230859;230860;230861;230862;230863;230864;230865;230866;230867;230868 183512;183513;183514;183515;183516;183517;183518;183519;183520;183521;183522;183523;183524;183525;183526;183527;183528;183529 183524 16 LANRLYGEK Unmodified 1062.5822 0.58219329 1289 P30740 SERPINB1 Leukocyte elastase inhibitor yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 28.66 24.302 2 0.031269 34189 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 99.442 64.634 134040000 122610000 7738700 3692800 0 0 0 0 0 0 0 0 0 0 0 0 27411 1289 25028 230869;230870;230871 183530 183530 0 LANSEPVGTQTAK Unmodified 1314.6779 0.67794416 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 21.417 21.625 2 3.3368E-05 21995 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 92.611 63.524 87129000 0 0 0 5008800 4558300 9922000 9353200 5351800 6747600 0 8920500 13444000 7256000 5716700 10851000 27412 5049 25029 230872;230873;230874;230875;230876;230877;230878;230879;230880;230881;230882 183531;183532;183533;183534;183535;183536;183537;183538;183539 183535 9 LANTCFNEIEK Unmodified 1337.6286 0.62855113 4534 Q9NP61 ARFGAP3 ADP-ribosylation factor GTPase-activating protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.72 2 13 1 1 1 1 1 1 1 1 1 1 2 1 1 1 51.612 51.048 2 3.648E-09 65000 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.84 93.19 632210000 0 122280000 2979500 26394000 28967000 35101000 30873000 35846000 28711000 42104000 52224000 75909000 44655000 34895000 71273000 27413 4534 25030 230883;230884;230885;230886;230887;230888;230889;230890;230891;230892;230893;230894;230895;230896;230897 183540;183541;183542;183543;183544;183545;183546;183547;183548;183549;183550;183551;183552;183553;183554;183555;183556 183543 17 LANVMMGPYRQDLLAK Oxidation (M) 1834.9434 0.9433601 1073 P18206 VCL Vinculin yes yes 0 1 1 By matching By matching By MS/MS 10 0 3 1 1 1 70.6 70.795 3 0.00073078 80892 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.899 30.936 21701000 0 0 0 0 0 4313700 0 0 0 0 0 0 0 3303200 14084000 27414 1073 25031 230898;230899;230900 183557 183557 1532 1 LANVMMGPYRQDLLAK Unmodified 1818.9484 0.94844548 1073 P18206 VCL Vinculin yes yes 0 0 1 By MS/MS 10 0 1 1 76.364 76.65 3 0.00011948 88010 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.326 60.095 14524000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14524000 27415 1073 25031 230901 183558 183558 1 LANVRAVPGTDLK Unmodified 1352.7776 0.77759863 4550 Q9NPF5 DMAP1 DNA methyltransferase 1-associated protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 53.976 47.941 3 0.034109 65649 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 30.905 18.637 75267000 71934000 0 3333300 0 0 0 0 0 0 0 0 0 0 0 0 27416 4550 25032 230902;230903 183559 183559 1 LAPALALPAPALR Unmodified 1272.7918 0.79179213 904 P0CW18 PRSS56 Serine protease 56 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 1 2 2 2 2 2 2 84.495 84.555 2;3 1.0995E-08 97863 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 110.41 95.257 702300000 0 0 0 32457000 49266000 58325000 47889000 57446000 39228000 66111000 65083000 92743000 54897000 58823000 80035000 27417 904 25033 230904;230905;230906;230907;230908;230909;230910;230911;230912;230913;230914;230915;230916;230917;230918;230919;230920;230921;230922;230923;230924;230925;230926 183560;183561;183562;183563;183564;183565;183566;183567;183568;183569;183570;183571;183572;183573;183574;183575;183576 183564 17 LAPALPAWPHR Unmodified 1227.6877 0.68766141 3941 Q96P11 NSUN5 Probable 28S rRNA (cytosine-C(5))-methyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 72.283 72.397 3 0.00035063 82563 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.726 52.388 173200000 0 0 0 8799800 0 19310000 9113900 22143000 10803000 14643000 17384000 25334000 14693000 11472000 19506000 27418 3941 25034 230927;230928;230929;230930;230931;230932;230933;230934;230935;230936;230937 183577;183578;183579;183580;183581;183582;183583;183584;183585 183580 6 LAPAQYIR Unmodified 930.5287 0.52870115 2320 Q13573 SNW1 SNW domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.843 48.006 2 0.0083495 53047 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 86.512 51.688 371880000 0 0 0 20531000 22021000 25718000 27450000 23740000 19960000 43866000 40101000 35977000 19835000 34629000 58049000 27419 2320 25035 230938;230939;230940;230941;230942;230943;230944;230945;230946;230947;230948;230949 183586;183587;183588;183589;183590 183590 5 LAPASNMTSQRPVSSTGINFDNPSVQK Unmodified 2845.4029 0.4028553 4510 Q9HCD5 NCOA5 Nuclear receptor coactivator 5 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 68.861 69.131 3 0.0034842 78876 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 23.917 21.168 15123000 0 0 0 0 0 0 0 2198200 0 3337400 4187800 0 0 0 5399400 27420 4510 25036 230950;230951;230952;230953 183591 183591 1 LAPDAEDSK Unmodified 944.44509 0.44509068 1187 P25391 LAMA1 Laminin subunit alpha-1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 10.725 10.841 2 0.02342 8836 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.066 27.094 18304000 0 0 0 1507100 959640 1523900 1345200 1140700 1188600 1766300 0 2708500 2117100 1360800 2686200 27421 1187 25037 230954;230955;230956;230957;230958;230959;230960;230961;230962;230963;230964 183592;183593 183593 2 LAPDRESLLLK Unmodified 1253.7343 0.73433683 2224 Q13017 ARHGAP5 Rho GTPase-activating protein 5 yes yes 0 0 1 By MS/MS 2 0 1 1 65.69 57.402 3 0.013637 77065 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.976 25.31 43766000 43766000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27422 2224 25038 230965 183594 183594 1 LAPDYDALDVANK Unmodified 1403.6933 0.69325988 1908 P62750 RPL23A 60S ribosomal protein L23a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 67.105 65.828 2 0.00054263 76075 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 78.342 78.342 2401600000 9064300 132810000 0 146870000 144210000 159660000 166020000 161180000 146010000 245400000 290980000 299490000 227600000 0 272350000 27423 1908 25039 230966;230967;230968;230969;230970;230971;230972;230973;230974;230975;230976;230977;230978;230979 183595;183596;183597;183598;183599;183600;183601;183602;183603;183604;183605;183606;183607 183596 10 LAPEFAK Unmodified 774.42759 0.42759012 1261 P30041 PRDX6 Peroxiredoxin-6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 36.033 34.928 2 0.02222 44447 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.74 51.718 15193000000 1399400000 11382000000 685100000 51320000 34969000 67644000 51805000 37999000 39411000 84868000 245930000 256930000 58900000 210910000 585520000 27424 1261 25040 230980;230981;230982;230983;230984;230985;230986;230987;230988;230989;230990;230991;230992;230993;230994;230995 183608;183609;183610;183611 183609 4 LAPEYEAAATR Unmodified 1190.5932 0.5931519 1270 P30101 PDIA3 Protein disulfide-isomerase A3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.945 37.126 2 0.0016022 39853 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.614 57.099 115370000 0 0 0 5587100 5300700 3129400 6642000 3639900 4085100 4261000 14621000 24077000 5267200 9530800 29224000 27425 1270 25041 230996;230997;230998;230999;231000;231001;231002;231003;231004;231005;231006;231007 183612;183613;183614;183615;183616;183617;183618;183619 183613 8 LAPEYEK Unmodified 848.42798 0.42798405 982 P13667 PDIA4 Protein disulfide-isomerase A4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.871 20.075 2 0.023725 20761 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 84.244 39.633 408310000 0 0 0 25432000 27429000 15980000 22517000 25341000 20136000 32858000 59447000 34560000 30807000 40341000 73463000 27426 982 25042 231008;231009;231010;231011;231012;231013;231014;231015;231016;231017;231018;231019 183620;183621;183622;183623;183624;183625;183626;183627 183622 8 LAPGFDAELIVK Unmodified 1271.7125 0.71253876 640 O95302;Q75LS8 FKBP9;FKBP9P1 Peptidyl-prolyl cis-trans isomerase FKBP9;Putative FK506-binding protein 9-like protein yes no 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 86.373 81.245 2 0.026524 102528 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 51.765 35.432 148100000 11272000 130760000 6063800 0 0 0 0 0 0 0 0 0 0 0 0 27427 640 25043 231020;231021;231022 183628;183629 183628 2 LAPGTIVEVWK Unmodified 1211.6914 0.69140938 845 P07686 HEXB Beta-hexosaminidase subunit beta;Beta-hexosaminidase subunit beta chain B;Beta-hexosaminidase subunit beta chain A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81.532 81.067 2 0.00047061 93576 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 84.213 65.81 90594000 0 19784000 18405000 7023900 1792300 2782800 2937300 3973900 2708900 4966900 4361400 7323300 2634700 3339000 8560900 27428 845 25044 231023;231024;231025;231026;231027;231028;231029;231030;231031;231032;231033;231034;231035;231036 183630;183631;183632;183633;183634;183635;183636;183637;183638;183639;183640;183641;183642;183643 183637 14 LAPGYDPDTVASPK Unmodified 1429.7089 0.70890994 5004 Q9ULT8 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 49.443 49.115 2 0.018274 56300 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 36.252 25.5 19159000 0 0 0 4555600 2943500 0 0 0 0 11660000 0 0 0 0 0 27429 5004 25045 231037;231038;231039 183644 183644 1 LAPIMFGIK Unmodified 988.57796 0.57795953 5075 Q9Y223 GNE Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase;UDP-N-acetylglucosamine 2-epimerase (hydrolyzing);N-acetylmannosamine kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 85.153 83.094 2 0.018417 106382 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.674 58.943 78430000 36928000 20397000 0 0 0 0 0 0 0 0 4045700 2432400 0 4127100 10499000 27430 5075 25046 231040;231041;231042;231043;231044;231045 183645;183646;183647 183647 3 LAPITSDPTEATAVGAVEASFK Unmodified 2174.1107 0.11067925 1000 P14618 PKM Pyruvate kinase PKM yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 87.387 87.457 2;3 1.4807E-111 101420 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 218.78 203.39 1078500000 0 0 0 9807300 46904000 22390000 21109000 55428000 32717000 211280000 182400000 141560000 7119600 53951000 293850000 27431 1000 25047 231046;231047;231048;231049;231050;231051;231052;231053;231054;231055;231056;231057;231058;231059;231060;231061;231062;231063;231064;231065;231066;231067;231068;231069 183648;183649;183650;183651;183652;183653;183654;183655;183656;183657;183658;183659;183660;183661;183662;183663;183664;183665;183666;183667 183651 17 LAPLLLGNPQPMVM 2 Oxidation (M) 1524.8044 0.80440701 4345 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 87.17 87.249 2 0.00095982 101112 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 49.418 43.177 24227000 0 0 0 2106700 0 2807000 3951900 0 1709800 3757800 3887000 0 0 2920700 3086300 27432 4345 25048 231070;231071;231072;231073;231074;231075;231076;231077 183668 183668 5807;5808 1 LAPLNEGGTAELLNK Unmodified 1538.8304 0.83042206 4559 Q9NQ48 LZTFL1 Leucine zipper transcription factor-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 72.893 72.137 2 3.5561E-40 89979 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145.23 118.63 352380000 0 302870000 2480200 1727900 1498700 4928400 2919800 4158600 0 5829900 5080000 4547500 3579000 3956600 8801300 27433 4559 25049 231078;231079;231080;231081;231082;231083;231084;231085;231086;231087;231088;231089;231090;231091;231092 183669;183670;183671;183672;183673;183674;183675;183676;183677;183678;183679 183672 11 LAPNEFPHK Unmodified 1051.5451 0.5450795 3916 Q96L92 SNX27 Sorting nexin-27 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 33.995 32.559 2 0.016224 34315 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.721 40.518 73562000 35438000 0 27191000 0 0 1799800 0 0 0 1954300 2697200 0 0 0 4481700 27434 3916 25050 231093;231094;231095;231096;231097;231098 183680;183681;183682 183680 3 LAPPPPPAAAPGTPHLLSK Unmodified 1831.0356 0.03560423 4486 Q9HAH7 FBRS Probable fibrosin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.238 69.314 3 0.014558 78827 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 32.981 22.194 83604000 0 0 0 5174300 4859100 4589800 6190700 7170500 6544400 5517400 9063600 8867900 6355100 7477500 11794000 27435 4486 25051 231099;231100;231101;231102;231103;231104;231105;231106;231107;231108;231109;231110 183683;183684;183685 183685 2 LAPSEDELTCFSK Unmodified 1495.6865 0.68645994 2986 Q6VMQ6 ATF7IP Activating transcription factor 7-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 65.637 65.27 2 0.00028506 74758 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 82.171 63.499 272590000 0 177660000 0 4316700 5095200 6096000 6306400 5859200 4621200 12487000 8666400 9419600 9950300 8931200 13191000 27436 2986 25052 231111;231112;231113;231114;231115;231116;231117;231118;231119;231120;231121;231122;231123 183686;183687;183688;183689;183690;183691;183692;183693;183694;183695;183696;183697;183698;183699;183700 183695 15 LAPVPSPEPQKPAPVSPESVK Unmodified 2153.1732 0.17321992 3897 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 60.31 59.643 3 1.6184E-05 67215 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 54.637 49.984 138820000 0 32741000 0 10006000 6392000 3790400 8951400 9333500 4688500 11490000 9858900 11250000 9371600 7821700 13122000 27437 3897 25053 231124;231125;231126;231127;231128;231129;231130;231131;231132;231133;231134;231135;231136;231137 183701;183702;183703;183704;183705;183706;183707;183708;183709;183710;183711;183712;183713;183714 183709 14 LAQAAQSSAATITQLAEVVK Unmodified 1999.095 0.094969603 5201 Q9Y4G6 TLN2 Talin-2 yes yes 0 0 0 By MS/MS 2 0 2 2 91.743 86.832 2;3 5.1556E-86 107894 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 157.68 135.15 66239000 0 66239000 0 0 0 0 0 0 0 0 0 0 0 0 0 27438 5201 25054 231138;231139 183715;183716 183716 2 LAQAAQSSVATITR Unmodified 1415.7732 0.77324153 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.232 45.401 2 1.4078E-12 49865 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 134.3 109.17 751010000 0 0 0 31327000 29231000 87510000 44219000 40597000 33200000 84990000 68046000 86577000 53929000 56523000 134870000 27439 5187 25055 231140;231141;231142;231143;231144;231145;231146;231147;231148;231149;231150;231151 183717;183718;183719;183720;183721;183722;183723;183724;183725;183726;183727 183723 11 LAQAAQSSVATITRLADVVK Unmodified 2041.1532 0.15315318 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 1 By MS/MS 2 0 1 1 92.713 84.583 3 4.4303E-07 109674 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.705 59.838 17820000 17820000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27440 5187 25056 231152 183728;183729 183729 2 LAQAEEQLEQETR Unmodified 1543.7478 0.74781464 3090 Q7Z406 MYH14 Myosin-14 yes yes 0 0 0 By MS/MS 10 0 1 1 44.409 43.868 2 4.0705E-08 49740 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 126.19 119.59 8155900 0 0 0 8155900 0 0 0 0 0 0 0 0 0 0 0 27441 3090 25057 231153 183730 183730 1 LAQAGYR Unmodified 777.41334 0.41333704 3882 Q96IU4 ABHD14B Alpha/beta hydrolase domain-containing protein 14B yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 13.087 13.175 2 0.038665 12376 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 69.39 10.729 42015000 0 0 0 0 3457700 4976400 5162500 3774700 3822200 5264100 0 0 9401900 6155500 0 27442 3882 25058 231154;231155;231156;231157;231158;231159;231160;231161 183731 183731 1 LAQAHPAGPPTLDPVNDLQLK Unmodified 2194.1746 0.17461691 2540 Q15477 SKIV2L Helicase SKI2W yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.169 78.262 3 9.9651E-12 90027 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.89 73.182 118520000 0 0 0 5223400 0 11746000 6432000 4900400 6871200 15040000 9777700 17176000 8495200 10816000 22039000 27443 2540 25059 231162;231163;231164;231165;231166;231167;231168;231169;231170;231171;231172;231173 183732;183733;183734;183735;183736;183737;183738;183739;183740;183741;183742;183743;183744;183745;183746 183736 15 LAQALLEQGGR Unmodified 1154.6408 0.6407708 3197 Q86XL3 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 48.201 48.463 2 0.0021805 53495 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.893 43.494 35562000 0 0 0 0 3512900 3961100 0 3617500 2565400 0 4570700 7095100 4467100 0 5772600 27444 3197 25060 231174;231175;231176;231177;231178;231179;231180;231181 183747;183748;183749 183747 3 LAQANGWGVMVSHR Unmodified 1524.762 0.76196534 827 P06733 ENO1 Alpha-enolase yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 2 2 60.022 60.218 2;3 0.001124 69419 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 55.213 49.729 468150000 0 0 0 20584000 0 0 4709700 0 0 0 44780000 0 0 49146000 348930000 27445 827 25061 231182;231183;231184;231185;231186;231187;231188 183750;183751;183752;183753;183754 183754 3 LAQANGWGVMVSHR Oxidation (M) 1540.7569 0.75687996 827 P06733 ENO1 Alpha-enolase yes yes 0 1 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 47.535 48.008 3 0.0027028 53265 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 40.983 15.862 114590000 0 0 0 0 0 0 0 0 0 0 59175000 7484500 0 47928000 0 27446 827 25061 231189;231190;231191 183755;183756 183756 997 1 LAQATQER Unmodified 915.47739 0.47739386 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 7.0419 7.1396 2 0.0048728 5058 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 109.01 34.597 61529000 0 0 0 4217100 4532900 9324100 5386100 8446000 5485900 6416600 0 4808900 0 4555400 8356000 27447 5071 25062 231192;231193;231194;231195;231196;231197;231198;231199;231200;231201 183757;183758;183759;183760;183761;183762;183763;183764;183765;183766;183767 183758 11 LAQATQERTDLYAK Unmodified 1606.8315 0.83148469 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 32.88 32.362 3 0.0089413 42714 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 35.037 14.374 197690000 0 18299000 0 6080200 10329000 13592000 11812000 11835000 12711000 12427000 21907000 21077000 13836000 13250000 30533000 27448 5071 25063 231202;231203;231204;231205;231206;231207;231208;231209;231210;231211;231212;231213;231214;231215 183768;183769;183770;183771;183772 183768 2 LAQAYYESTR Unmodified 1200.5775 0.57750184 78 CON__P20930;P20930 FLG Filaggrin yes no 0 0 0 By MS/MS 10 0 1 1 32.896 32.517 2 0.0023307 35819 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 89.886 60.968 + 34345000 0 0 0 34345000 0 0 0 0 0 0 0 0 0 0 0 27449 78 25064 231216 183773 183773 1 LAQAYYESTRK Unmodified 1328.6725 0.67246486 78 CON__P20930;P20930 FLG Filaggrin yes no 0 0 1 By MS/MS By matching By MS/MS 10 0 4 2 1 1 24.094 23.961 2;3 0.00056064 25236 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 59.496 51.772 + 1056100000 0 0 0 1037000000 667360 0 0 18404000 0 0 0 0 0 0 0 27450 78 25065 231217;231218;231219;231220 183774;183775 183775 2 LAQDFLDSQNLSAYNTR Unmodified 1954.9385 0.93846896 4737 Q9NY33 DPP3 Dipeptidyl peptidase 3 yes yes 0 0 0 By MS/MS 10 0 1 1 77.789 78.054 2 1.4819E-38 89693 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 178.84 147.96 31596000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31596000 27451 4737 25066 231221 183776 183776 1 LAQDPFPLYPGEVLEK Unmodified 1814.9455 0.94545182 2444 Q14764 MVP Major vault protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 89.218 89.351 2 0.00027027 103485 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.102 69.257 37281000 0 0 0 0 0 3328500 0 5712000 0 7381400 5703200 0 2592500 0 12563000 27452 2444 25067 231222;231223;231224;231225;231226;231227 183777;183778;183779;183780;183781;183782 183779 6 LAQEEESEAK Unmodified 1132.5248 0.52479757 167 O00541 PES1 Pescadillo homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 9.3054 9.4645 2 5.2139E-05 6471 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 144.09 131.13 268540000 0 0 0 32112000 0 23236000 23964000 9860300 13098000 24758000 39544000 34683000 22691000 15443000 29154000 27453 167 25068 231228;231229;231230;231231;231232;231233;231234;231235;231236;231237;231238 183783;183784;183785;183786;183787;183788;183789;183790;183791;183792;183793 183788 10 LAQEEESEAKR Unmodified 1288.6259 0.62590859 167 O00541 PES1 Pescadillo homolog yes yes 0 0 1 By MS/MS 10 0 1 1 8.8098 8.6719 3 0.037513 6948 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 35.677 26.165 5134300 0 0 0 0 5134300 0 0 0 0 0 0 0 0 0 0 27454 167 25069 231239 183794 183794 0 LAQEGIYTLYPFINSR Unmodified 1883.9781 0.97814893 2168 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 2 2 1 2 2 2 1 2 2 90.996 91.129 2;3 2.4949E-10 106053 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 93.959 77.822 59417000 0 0 0 0 0 4464200 0 4063600 1326700 10264000 5215600 4955400 812420 3852200 24463000 27455 2168 25070 231240;231241;231242;231243;231244;231245;231246;231247;231248;231249;231250;231251;231252;231253;231254;231255 183795;183796;183797;183798;183799;183800;183801;183802;183803;183804 183804 10 LAQENMDLFK Oxidation (M) 1223.5856 0.58562368 1340 P35221 CTNNA1 Catenin alpha-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48.659 48.431 2 0.00086549 55271 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 107.69 90.454 411470000 0 10934000 0 34946000 24123000 36161000 30707000 24807000 23126000 37059000 33831000 50483000 48536000 26968000 29794000 27456 1340 25071 231256;231257;231258;231259;231260;231261;231262;231263;231264;231265;231266;231267;231268;231269 183805;183806;183807;183808;183809;183810;183811;183812;183813;183814;183815;183816;183817;183818;183819 183819 2027 15 LAQENMDLFK Unmodified 1207.5907 0.59070906 1340 P35221 CTNNA1 Catenin alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67.719 66.954 2 0.00093431 76788 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 128.36 128.36 380110000 18454000 0 3717800 18726000 16828000 28983000 21422000 23539000 15104000 38057000 38522000 35235000 26942000 30288000 64294000 27457 1340 25071 231270;231271;231272;231273;231274;231275;231276;231277;231278;231279;231280;231281;231282;231283 183820;183821;183822;183823;183824;183825;183826;183827;183828;183829;183830;183831;183832;183833 183825 9 LAQEQGGGDNSLLVR Unmodified 1555.7954 0.79543354 4924 Q9UID3 VPS51 Vacuolar protein sorting-associated protein 51 homolog yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 48.697 48.841 2 5.7275E-06 55042 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 105.46 74.039 41548000 0 0 0 5384600 0 9030900 0 0 0 0 0 0 7100200 7490500 12541000 27458 4924 25072 231284;231285;231286;231287;231288 183834;183835;183836;183837;183838 183837 5 LAQFEPSQR Unmodified 1074.5458 0.54580778 2152 Q08211 DHX9 ATP-dependent RNA helicase A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.592 34.776 2 0.0030525 38745 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 91.069 91.069 541510000 0 0 0 47462000 34168000 56082000 32465000 26335000 25761000 55695000 57807000 58966000 41752000 37575000 67441000 27459 2152 25073 231289;231290;231291;231292;231293;231294;231295;231296;231297;231298;231299;231300 183839;183840;183841;183842;183843;183844;183845;183846;183847;183848;183849;183850;183851;183852;183853;183854 183853 14 LAQFSSSAAPPEPEGAAAR Unmodified 1855.9064 0.90644055 5353 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 2 1 2 1 2 1 1 2 2 77.64 77.688 3 0.0031209 90053 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 23.33 7.1917 + 194260000 0 0 0 6125700 21808000 11430000 0 27144000 8642700 35295000 13914000 16639000 21896000 0 31367000 27460 5353 25074 231301;231302;231303;231304;231305;231306;231307;231308;231309;231310;231311;231312;231313;231314;231315 183855;183856;183857;183858;183859 183858 5 LAQFVAR Unmodified 803.46537 0.46537261 3249 Q8IWX8 CHERP Calcium homeostasis endoplasmic reticulum protein yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 36.798 36.939 2 0.023333 40722 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 90.836 9.8371 275810000 0 0 0 18319000 20283000 23215000 23689000 20490000 19046000 32896000 0 46199000 34327000 0 37340000 27461 3249 25075 231316;231317;231318;231319;231320;231321;231322;231323;231324;231325 183860;183861;183862;183863 183861 4 LAQFVARNGPEFEK Unmodified 1604.8311 0.83109076 3249 Q8IWX8 CHERP Calcium homeostasis endoplasmic reticulum protein yes yes 0 0 1 By MS/MS 2 0 2 2 65.954 57.659 2;3 2.1046E-12 77462 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 111.63 76.089 34707000 34707000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27462 3249 25076 231326;231327 183864;183865 183865 2 LAQFVEHWK Unmodified 1156.6029 0.60292873 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 2 1 1 1 1 1 2 1 2 55.971 56.283 2;3 0.011032 63347 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 75.043 56.818 133350000 0 0 0 0 0 21077000 6975600 6781100 5761700 8529500 12003000 23317000 0 939510 47965000 27463 2344 25077 231328;231329;231330;231331;231332;231333;231334;231335;231336;231337;231338;231339 183866;183867;183868 183868 3 LAQGEYIAPEK Unmodified 1217.6292 0.62920306 1327 P33121;Q9ULC5 ACSL1;ACSL5 Long-chain-fatty-acid--CoA ligase 1;Long-chain-fatty-acid--CoA ligase 5 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.672 38.82 2 0.00038093 43735 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 87.258 46.99 35361000 0 0 0 3653600 2752800 0 0 4179500 2574400 3981300 3250100 6840900 4403000 3725800 0 27464 1327 25078 231340;231341;231342;231343;231344;231345;231346;231347;231348;231349;231350;231351 183869;183870;183871;183872;183873;183874;183875;183876;183877;183878;183879;183880 183879 12 LAQGHTTVDELAR Unmodified 1409.7263 0.72629134 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.612 34.747 3 4.331E-08 37425 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 79.089 66.473 145980000 0 0 0 12143000 9752100 13114000 13962000 10045000 0 12465000 21318000 26168000 15723000 11286000 0 27465 2501 25079 231352;231353;231354;231355;231356;231357;231358;231359;231360;231361;231362;231363 183881;183882;183883;183884;183885;183886;183887;183888;183889;183890;183891;183892 183890 9 LAQGHTTVDELARR Unmodified 1565.8274 0.82740237 2501 Q15149 PLEC Plectin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 32.325 32.503 4 0.00082997 34669 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 33.842 26.783 60122000 0 0 0 3610800 2645800 3992800 8758000 5964000 4321800 0 5487800 11782000 4898400 0 8660000 27466 2501 25080 231364;231365;231366;231367;231368;231369;231370;231371;231372;231373 183893;183894;183895;183896;183897 183897 5 LAQGLTHLGK Unmodified 1036.6029 0.60292873 2252 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.121 35.303 2 0.001444 38120 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 91.087 47.964 508730000 0 0 0 24693000 37070000 52733000 17816000 19481000 9434500 69396000 85901000 87159000 24361000 22889000 57791000 27467 2252 25081 231374;231375;231376;231377;231378;231379;231380;231381;231382;231383;231384;231385 183898;183899;183900;183901;183902;183903;183904;183905;183906;183907;183908;183909 183904 12 LAQGPELAEDDANLLHK Unmodified 1832.9268 0.92684164 3623 Q92558 WASF1 Wiskott-Aldrich syndrome protein family member 1 yes yes 0 0 0 By MS/MS 2 0 1 1 73.68 68.135 3 1.8533E-54 86104 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.96 107.9 76345000 0 76345000 0 0 0 0 0 0 0 0 0 0 0 0 0 27468 3623 25082 231386 183910;183911 183911 2 LAQGSPAVAR Unmodified 968.54033 0.54032847 2795 Q5TCZ1 SH3PXD2A SH3 and PX domain-containing protein 2A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.427 19.625 2 0.0017953 19938 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 101.72 39.004 152630000 0 0 0 10344000 9672100 13890000 12933000 9579500 9111000 14148000 17177000 18509000 12107000 10080000 15080000 27469 2795 25083 231387;231388;231389;231390;231391;231392;231393;231394;231395;231396;231397;231398 183912;183913;183914;183915;183916;183917;183918;183919;183920;183921 183914 6 LAQHITYVHQHSR Unmodified 1588.8223 0.82225741 1334 P33993 MCM7 DNA replication licensing factor MCM7 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 19.824 20.025 4 0.004452 20551 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 49.12 41.75 30852000 0 0 0 0 0 11560000 0 3915700 6165300 0 9211400 0 0 0 0 27470 1334 25084 231399;231400;231401;231402 183922;183923 183922 2 LAQHVKPEEHEQVK Unmodified 1670.874 0.87401821 4264 Q9BZF9 UACA Uveal autoantigen with coiled-coil domains and ankyrin repeats yes yes 0 0 1 By MS/MS 2 0 1 1 17.941 13.561 4 0.028349 19899 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 38.337 24.918 17642000 17642000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27471 4264 25085 231403 183924 183924 1 LAQILAAR Unmodified 854.53379 0.53378653 3359 Q8N6M0 OTUD6B OTU domain-containing protein 6B yes yes 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 46.887 47.248 2 0.021946 51849 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.561 22.589 49559000 0 0 0 0 0 0 4928100 3385800 0 4687600 6653600 5716400 6963000 5427600 11797000 27472 3359 25086 231404;231405;231406;231407;231408;231409;231410;231411 183925;183926 183925 2 LAQIQQAK Unmodified 898.52362 0.52361577 4647 Q9NUL3;O95793 STAU2;STAU1 Double-stranded RNA-binding protein Staufen homolog 2;Double-stranded RNA-binding protein Staufen homolog 1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 2 1 1 1 1 1 1 1 1 1 19.758 20.023 2 0.0048806 16591 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 108.98 29.043 46887000 0 0 0 0 0 15515000 0 2898100 2868400 3631800 3912000 8127700 0 4303600 5630100 27473 4647 25087 231412;231413;231414;231415;231416;231417;231418;231419;231420;231421;231422;231423 183927;183928;183929;183930;183931;183932;183933;183934;183935;183936;183937;183938 183931 12 LAQLEAALQQAK Unmodified 1282.7245 0.72450043 99 Q6KB66;CON__Q6KB66-1 KRT80 Keratin, type II cytoskeletal 80 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching 10 0 5 1 1 1 1 1 67.455 67.368 2 1.377E-08 77151 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 152.54 110.66 + 175240000 0 0 0 41407000 13591000 0 0 40538000 0 0 0 49343000 30361000 0 0 27474 99 25088 231424;231425;231426;231427;231428 183939;183940;183941 183939 2 LAQLLEGYAR Unmodified 1132.6241 0.6240581 611 O94966 USP19 Ubiquitin carboxyl-terminal hydrolase 19 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 67.09 67.235 2 0.010028 77320 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 56.729 36.739 18885000 0 0 0 0 1497700 3150100 0 0 0 3047100 2300300 3045900 0 2767500 3076800 27475 611 25089 231429;231430;231431;231432;231433;231434;231435 183942;183943;183944;183945;183946;183947 183942 6 LAQLVEK Unmodified 799.48035 0.48035398 125 O00186 STXBP3 Syntaxin-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 29.289 28.971 2 0.034409 31656 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 71.296 17.239 106400000 0 40991000 0 9012200 0 0 6758600 0 0 9313200 15320000 7771900 9743500 0 7488400 27476 125 25090 231436;231437;231438;231439;231440;231441;231442;231443 183948;183949;183950 183948 2 LAQMEEAPLFPGESIK Oxidation (M) 1774.8811 0.881137 2326 Q13613 MTMR1 Myotubularin-related protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 1 1 6 2 1 1 1 1 1 1 76.973 75.526 2 6.1982E-42 93567 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 149.69 134.82 93869000 0 73921000 0 4736800 3531600 0 3569900 0 0 8109300 0 0 0 0 0 27477 2326 25091 231444;231445;231446;231447;231448;231449;231450;231451 183951;183952;183953;183954;183955;183956;183957;183958 183954 3789 8 LAQMEEAPLFPGESIK Unmodified 1758.8862 0.88622238 2326 Q13613 MTMR1 Myotubularin-related protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 82.949 81.456 2 0.0048855 94383 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 51.774 38.574 137730000 0 127950000 0 0 0 0 0 0 0 5564700 4214600 0 0 0 0 27478 2326 25091 231452;231453;231454;231455 183959;183960;183961;183962 183959 4 LAQMFSDMVLK Unmodified 1281.6461 0.64611545 762 P02786 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 89.5 81.37 2 0.01217 104724 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.08 57.85 7449800 7449800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27479 762 25092 231456;231457 183963;183964 183963 2 LAQMFSDMVLK Oxidation (M) 1297.641 0.64103007 762 P02786 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 7 1 1 1 1 1 1 1 73.889 74.089 2 0.016664 85363 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 40.725 26.056 24285000 0 0 0 0 0 0 2215900 2887100 0 0 3352200 5771200 3214300 2662900 4181000 27480 762 25092 231458;231459;231460;231461;231462;231463;231464 183965 183965 914 1 LAQMISDHNDADFEEK Oxidation (M) 1877.8102 0.8101569 2380 Q14157 UBAP2L Ubiquitin-associated protein 2-like yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 2 1 2 1 2 2 2 2 1 2 39.651 39.832 2;3 7.605E-28 44452 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 127.75 124.58 753570000 0 0 0 52912000 58538000 56125000 9182500 59659000 5834000 89223000 92461000 96581000 84998000 51182000 96875000 27481 2380 25093 231465;231466;231467;231468;231469;231470;231471;231472;231473;231474;231475;231476;231477;231478;231479;231480;231481;231482;231483;231484;231485 183966;183967;183968;183969;183970;183971;183972;183973;183974;183975;183976;183977;183978;183979;183980;183981;183982;183983 183983 3871 17 LAQMISDHNDADFEEK Unmodified 1861.8152 0.81524228 2380 Q14157 UBAP2L Ubiquitin-associated protein 2-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 2 1 2 2 50.979 51.124 2;3 1.3433E-59 57539 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 171.91 162.12 1584200000 0 0 0 97379000 74139000 106360000 113050000 121120000 109360000 164790000 184700000 167690000 96956000 126220000 222390000 27482 2380 25093 231486;231487;231488;231489;231490;231491;231492;231493;231494;231495;231496;231497;231498;231499;231500;231501;231502;231503;231504;231505;231506;231507;231508 183984;183985;183986;183987;183988;183989;183990;183991;183992;183993;183994;183995;183996;183997;183998;183999;184000;184001;184002;184003;184004;184005 183984 22 LAQNPLFWK Unmodified 1115.6128 0.61276513 2700 Q53FT3 C11orf73 Protein Hikeshi yes yes 0 0 0 By MS/MS 10 0 1 1 77.102 77.289 2 0.031455 89364 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 68.915 31.357 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27483 2700 25094 231509 184006 184006 1 LAQPAPELAVFQK Unmodified 1410.7871 0.78710068 530 O75665 OFD1 Oral-facial-digital syndrome 1 protein yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.938 77.997 2 0.029403 90183 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 43.651 33.996 54673000 0 0 0 4184300 3778700 3640500 3028700 4764000 4162500 5514500 5433800 4692900 3246200 5300100 6927300 27484 530 25095 231510;231511;231512;231513;231514;231515;231516;231517;231518;231519;231520;231521 184007;184008;184009 184009 3 LAQQELQK Unmodified 956.5291 0.52909508 5053 Q9UPP1 PHF8 Histone lysine demethylase PHF8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 17.123 16.874 2 0.012754 21259 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.904 15.54 67156000 0 18763000 0 1378400 1532000 6126400 0 0 0 6634500 0 9612200 7179500 4719200 11210000 27485 5053 25096 231522;231523;231524;231525;231526;231527;231528;231529;231530 184010;184011 184011 2 LAQQGNLLEK Unmodified 1112.619 0.61897272 5048 Q9UPM8 AP4E1 AP-4 complex subunit epsilon-1 yes yes 0 0 0 By MS/MS 2 0 1 1 42.312 37.216 2 0.027276 48373 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.045 31.827 62518000 0 62518000 0 0 0 0 0 0 0 0 0 0 0 0 0 27486 5048 25097 231531 184012 184012 1 LAQQGSDLIVPAGGQR Unmodified 1608.8584 0.85836815 1712 P53367 ARFIP1 Arfaptin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.588 55.715 2 1.2949E-07 62801 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 107.18 83.189 69020000 0 0 0 3219400 3153100 4511000 5288400 5065300 3624200 7111900 8046000 8135300 6382300 4640600 9842500 27487 1712 25098 231532;231533;231534;231535;231536;231537;231538;231539;231540;231541;231542;231543 184013;184014;184015;184016;184017;184018;184019;184020;184021;184022;184023;184024 184022 12 LAQQISDEASR Unmodified 1216.6048 0.60477922 3701 Q93008 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.036 27.233 2 2.0671E-05 28089 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 123.86 90.313 251750000 0 0 0 11711000 13952000 23764000 14273000 13876000 10691000 27250000 29122000 28515000 20823000 23800000 33975000 27488 3701 25099 231544;231545;231546;231547;231548;231549;231550;231551;231552;231553;231554;231555 184025;184026;184027;184028;184029;184030;184031;184032;184033;184034;184035;184036 184028 11 LAQQLTMER Oxidation (M) 1104.5597 0.55974328 3239 Q8IWE2 FAM114A1 Protein NOXP20 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 2 1 1 2 1 1 2 2 2 1 27.407 27.62 2 0.0026096 28945 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 88.37 54.819 107320000 0 0 0 8276500 5512000 5652700 14721000 5568200 0 7433800 17983000 17972000 17790000 0 6414200 27489 3239 25100 231556;231557;231558;231559;231560;231561;231562;231563;231564;231565;231566;231567;231568;231569;231570 184037;184038;184039;184040;184041;184042;184043;184044 184044 4851 7 LAQQLTMER Unmodified 1088.5648 0.56482866 3239 Q8IWE2 FAM114A1 Protein NOXP20 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.792 39.971 2 0.0034711 44279 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 103.87 73.136 204740000 0 0 0 10517000 10324000 16375000 10953000 10665000 8898700 15216000 22310000 23304000 22138000 15012000 39028000 27490 3239 25100 231571;231572;231573;231574;231575;231576;231577;231578;231579;231580;231581;231582 184045;184046;184047;184048;184049;184050 184049 4 LAQQMENRPSVQAALK Oxidation (M) 1798.936 0.93596654 5179 Q9Y3Y2 CHTOP Chromatin target of PRMT1 protein yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 38.177 38.475 3 0.00080739 42848 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 48.177 38.428 30374000 0 0 0 0 0 6017000 0 0 5405100 0 0 0 0 9875000 9077200 27491 5179 25101 231583;231584;231585;231586 184051;184052;184053 184051 6551 3 LAQQMENRPSVQAALK Unmodified 1782.9411 0.94105192 5179 Q9Y3Y2 CHTOP Chromatin target of PRMT1 protein yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 2 1 1 1 1 1 1 1 47.299 47.54 3 8.3051E-15 53408 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 73.296 48.881 144080000 0 0 0 0 10739000 15682000 0 14480000 5988700 0 22593000 25776000 14756000 14543000 19525000 27492 5179 25101 231587;231588;231589;231590;231591;231592;231593;231594;231595;231596 184054;184055;184056;184057;184058;184059;184060;184061;184062 184057 8 LAQQPHQNQAK Unmodified 1261.6527 0.65273247 4079 Q9BPX3 NCAPG Condensin complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 5.7853 5.9088 3 0.0020936 3568 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 59.067 44.81 125620000 0 0 0 12506000 10678000 0 9694700 13655000 8483500 14746000 10532000 11031000 0 10887000 23408000 27493 4079 25102 231597;231598;231599;231600;231601;231602;231603;231604;231605;231606;231607 184063;184064;184065;184066;184067;184068;184069;184070;184071;184072 184066 10 LAQQQAAAAAAAAAAASQQGSAK Unmodified 2054.0505 0.050479026 4270 Q9BZK7 TBL1XR1 F-box-like/WD repeat-containing protein TBL1XR1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.15 2.41 2 1 24 1 2 2 2 2 2 2 2 2 2 2 2 2 2 65.886 65.27 2;3 4.5556E-81 81946 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.711 92.151 1944600000 11335000 281250000 0 74374000 84351000 108050000 123630000 118560000 94133000 143170000 163620000 229590000 126270000 159430000 226860000 27494 4270 25103 231608;231609;231610;231611;231612;231613;231614;231615;231616;231617;231618;231619;231620;231621;231622;231623;231624;231625;231626;231627;231628;231629;231630;231631;231632;231633;231634 184073;184074;184075;184076;184077;184078;184079;184080;184081;184082;184083;184084;184085;184086;184087;184088;184089;184090 184078 16 LAQQQAALLMQQEER Oxidation (M) 1771.8887 0.888682 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 33 3 2 3 2 3 3 3 3 3 3 2 3 51.453 51.622 2;3 2.7548E-49 57925 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 164.81 149.94 1415000000 0 0 0 99254000 49462000 99867000 62906000 129480000 114990000 139970000 164220000 207400000 152840000 68296000 126340000 27495 2290 25104 231635;231636;231637;231638;231639;231640;231641;231642;231643;231644;231645;231646;231647;231648;231649;231650;231651;231652;231653;231654;231655;231656;231657;231658;231659;231660;231661;231662;231663;231664;231665;231666;231667 184091;184092;184093;184094;184095;184096;184097;184098;184099;184100;184101;184102;184103;184104;184105;184106;184107;184108;184109 184100 3739 16 LAQQQAALLMQQEER Unmodified 1755.8938 0.89376737 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 65.588 65.675 2;3 7.9435E-72 75594 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 150.12 139.63 1695500000 0 0 0 74158000 109000000 101340000 100510000 127370000 99338000 141900000 170230000 230660000 140630000 155500000 244900000 27496 2290 25104 231668;231669;231670;231671;231672;231673;231674;231675;231676;231677;231678;231679;231680;231681;231682;231683;231684;231685;231686;231687;231688;231689;231690;231691 184110;184111;184112;184113;184114;184115;184116;184117;184118;184119;184120;184121;184122;184123;184124;184125;184126 184126 14 LAQQQAALLMQQEERAK Oxidation (M) 1971.0208 0.020758802 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2.38 0.484 5 3 3 4 1 55.98 50.099 3 1.1701E-73 67315 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 179.81 150.07 416310000 196160000 165620000 54521000 0 0 0 0 0 0 0 0 0 0 0 0 27497 2290 25105 231692;231693;231694;231695;231696;231697;231698;231699 184127;184128;184129;184130;184131;184132;184133;184134 184132 3739 8 LAQQQAALLMQQEERAK Unmodified 1955.0258 0.02584418 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 2 2 2 68.494 62.73 2;3 2.1675E-104 83135 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 209.64 192.27 922490000 562350000 258570000 101560000 0 0 0 0 0 0 0 0 0 0 0 0 27498 2290 25105 231700;231701;231702;231703;231704;231705 184135;184136;184137;184138;184139;184140;184141;184142 184141 7 LAQQQASAAAAAAAATAAATAATTTSAGVSHQNPSK Unmodified 3265.6287 0.62870915 443 O60907 TBL1X F-box-like/WD repeat-containing protein TBL1X yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 82.215 82.36 4 6.8861E-22 95294 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 44.915 33.912 10736000 0 0 0 0 0 0 0 4658100 0 6077700 0 0 0 0 0 27499 443 25106 231706;231707 184143;184144 184143 2 LAQQYVMTSLQQEYK Unmodified 1828.9029 0.90293508 2114 Q05397 PTK2 Focal adhesion kinase 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 1 2 79.594 73.161 2;3 1.4012E-41 92847 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.25 98.731 90167000 7940200 82227000 0 0 0 0 0 0 0 0 0 0 0 0 0 27500 2114 25107 231708;231709;231710 184145;184146;184147 184145 3 LAQQYYLVYQEPIPTAQLVQR Unmodified 2520.3377 0.33765949 1194 P25787 PSMA2 Proteasome subunit alpha type-2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 3 1 2 88.26 88.428 2;3 3.2202E-09 102340 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.651 77.238 21876000 0 0 0 0 0 0 0 0 0 0 4533400 0 0 0 17342000 27501 1194 25108 231711;231712;231713 184148;184149 184149 2 LAQSHHVK Unmodified 918.50355 0.50354903 1134 P22102 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes yes 0 0 0 By MS/MS 2 0 1 1 1.8423 -1.4523 2 0.0089743 1778 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 114.5 57.951 903690000 903690000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27502 1134 25109 231714 184150;184151 184151 2 LAQSVQK Unmodified 772.4443 0.44430282 5206 Q9Y4L1 HYOU1 Hypoxia up-regulated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching 2 0 3 1 1 1 8.1181 5.0802 2 0.043196 7522 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.307 11.566 556470000 47658000 450540000 58272000 0 0 0 0 0 0 0 0 0 0 0 0 27503 5206 25110 231715;231716;231717 184152 184152 1 LAQTSDVNK Unmodified 974.50327 0.50327426 2861 Q68EM7 ARHGAP17 Rho GTPase-activating protein 17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 9.3672 9.241 2 0.0041698 7176 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.696 41.979 53097000 0 17437000 0 2267300 0 3969500 3160600 2270400 1148600 3001800 4401000 4838200 3237900 2185400 5179000 27504 2861 25111 231718;231719;231720;231721;231722;231723;231724;231725;231726;231727;231728;231729 184153;184154;184155;184156;184157;184158;184159;184160 184157 8 LAQVIFDK Unmodified 932.53312 0.53311783 2779 Q5T6F2 UBAP2 Ubiquitin-associated protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.92 56.046 2 0.0045343 63642 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 110.31 76.794 531070000 0 0 0 31707000 30693000 28859000 44953000 46566000 39237000 46543000 55564000 47197000 46162000 47029000 66563000 27505 2779 25112 231730;231731;231732;231733;231734;231735;231736;231737;231738;231739;231740;231741 184161;184162;184163;184164;184165;184166;184167;184168;184169;184170;184171;184172 184169 12 LAQVQVQK Unmodified 912.53927 0.53926584 2062 Q01780 EXOSC10 Exosome component 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 23.802 23.227 2 0.0049612 29899 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.82 63.013 125000000 4027400 38117000 0 4458800 4003600 4919900 4581900 4888600 0 7158300 8979000 11696000 12433000 8923800 10812000 27506 2062 25113 231742;231743;231744;231745;231746;231747;231748;231749;231750;231751;231752;231753;231754 184173;184174;184175;184176;184177;184178;184179;184180;184181;184182;184183;184184 184176 12 LAQVSPELLLASVR Unmodified 1494.877 0.87697832 344 O43592 XPOT Exportin-T yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 91.298 91.429 2 0.0091432 106020 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 41.283 23.847 18964000 0 0 0 0 0 2147800 0 1329300 0 3118300 2438200 1384000 0 1673900 6872300 27507 344 25114 231755;231756;231757;231758;231759;231760;231761 184185;184186;184187;184188;184189;184190 184189 6 LAQYEPPQEEK Unmodified 1330.6405 0.64049603 4005 Q99417 MYCBP C-Myc-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.72 2 13 1 1 1 1 1 1 1 1 1 1 1 1 1 2 33.584 33.023 2 1.0347E-13 36859 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 145.9 137.44 446420000 9435800 95231000 0 20140000 19090000 17283000 22678000 18095000 20115000 33668000 38630000 40839000 35118000 26035000 50066000 27508 4005 25115 231762;231763;231764;231765;231766;231767;231768;231769;231770;231771;231772;231773;231774;231775;231776 184191;184192;184193;184194;184195;184196;184197;184198;184199;184200;184201;184202;184203;184204;184205;184206 184206 15 LAQYESK Unmodified 837.42323 0.42323303 1174 P24534 EEF1B2 Elongation factor 1-beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 9.7448 9.9831 2 0.023433 7446 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 85.359 16.875 71848000 0 0 0 0 0 16475000 0 0 0 0 24441000 0 0 0 30932000 27509 1174 25116 231777;231778;231779 184207;184208;184209 184209 2 LARAPADPGK Unmodified 994.55598 0.55597854 1710 P53350 PLK1 Serine/threonine-protein kinase PLK1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 15.107 11.38 2 0.0052546 16790 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 100.02 59.914 33754000 29112000 4641900 0 0 0 0 0 0 0 0 0 0 0 0 0 27510 1710 25117 231780;231781 184210 184210 0 LARASGNYATVISHNPETK Unmodified 2028.0389 0.038851707 1930 P62917 RPL8 60S ribosomal protein L8 yes yes 0 0 1 By MS/MS 2 0 2 2 51.354 43.392 3;4 2.6345E-15 59996 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 106.75 91.826 39361000 39361000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27511 1930 25118 231782;231783 184211;184212;184213 184212 2 LAREEMDRAVAEGK Unmodified 1573.7882 0.78823967 2230 Q13057 COASY Bifunctional coenzyme A synthase;Phosphopantetheine adenylyltransferase;Dephospho-CoA kinase yes yes 0 0 2 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 34.594 29.776 3 4.1458E-14 41489 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 132.65 107.2 114120000 83348000 17273000 13501000 0 0 0 0 0 0 0 0 0 0 0 0 27512 2230 25119 231784;231785;231786 184214;184215;184216 184215 1 LAREEPDIYQIAK Unmodified 1544.8199 0.81985738 2136 Q07157 TJP1 Tight junction protein ZO-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.18 3.74 3 1 7 1 2 1 1 1 1 1 1 1 1 60.349 58.251 3 1.759E-07 73302 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 123.02 108.67 176770000 12058000 41794000 36409000 14175000 11825000 0 12721000 8057800 0 16352000 0 0 9615500 13763000 0 27513 2136 25120 231787;231788;231789;231790;231791;231792;231793;231794;231795;231796;231797 184217;184218;184219;184220;184221;184222;184223;184224;184225;184226;184227 184223 8 LAREGENPPDGFMAPK Unmodified 1727.8301 0.83010449 642 O95340 PAPSS2 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 4 1 1 2 54.361 48.899 3 0.00073689 62264 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 55.011 51.178 358240000 17801000 247510000 92935000 0 0 0 0 0 0 0 0 0 0 0 0 27514 642 25121 231798;231799;231800;231801 184228;184229;184230;184231;184232;184233;184234 184234 7 LAREGENPPDGFMAPK Oxidation (M) 1743.825 0.82501911 642 O95340 PAPSS2 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes yes 0 1 1 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 46.776 42.412 3 0.00077251 53864 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 62.237 51.602 209650000 0 28293000 181360000 0 0 0 0 0 0 0 0 0 0 0 0 27515 642 25121 231802;231803 184235;184236;184237 184237 778 3 LAREIGLLSEEVELYGETK Unmodified 2148.1314 0.13141469 953 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS 2.25 0.433 3 1 3 1 92.466 86.289 2;3 3.2307E-24 109817 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 119.38 114.57 123430000 105680000 17747000 0 0 0 0 0 0 0 0 0 0 0 0 0 27516 953 25122 231804;231805;231806;231807 184238;184239;184240;184241 184240 3 LARFVAEGGPELEK Unmodified 1514.8093 0.80929269 3251 Q8IWZ8 SUGP1 SURP and G-patch domain-containing protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 66.031 57.737 3 0.00017921 77447 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.391 63.764 52920000 52920000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27517 3251 25123 231808 184242 184242 1 LASAAYPDPSK Unmodified 1118.5608 0.56078914 1740 P54577 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 33.571 32.588 2 2.6041E-09 38836 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 142.43 106.03 1140500000 1700300 850290000 2442400 11634000 9263200 21186000 15348000 10786000 11042000 23307000 38786000 29305000 15090000 24802000 75481000 27518 1740 25124 231809;231810;231811;231812;231813;231814;231815;231816;231817;231818;231819;231820;231821;231822;231823;231824 184243;184244;184245;184246;184247;184248;184249;184250;184251;184252;184253;184254;184255;184256;184257;184258;184259;184260 184252 16 LASADDIGTLICK Unmodified 1375.7017 0.70171607 2195 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 75.321 74.793 2 0.00092713 86383 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 82.171 72.379 338510000 0 111400000 0 14303000 13875000 15882000 15508000 11045000 13936000 23697000 22588000 30913000 19520000 21090000 24750000 27519 2195 25125 231825;231826;231827;231828;231829;231830;231831;231832;231833;231834;231835;231836;231837;231838 184261;184262;184263 184262 3 LASAFTEEQAVLYNQR Unmodified 1838.9163 0.91627696 4895 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 2 1 1 1 1 1 1 1 75.859 75.908 2;3 2.0234E-215 87437 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 232 198.94 235830000 0 0 0 7121900 11789000 25455000 23276000 25080000 16338000 26991000 26448000 33946000 25724000 13667000 0 27520 4895 25126 231839;231840;231841;231842;231843;231844;231845;231846;231847;231848;231849;231850 184264;184265;184266;184267;184268;184269;184270;184271;184272;184273;184274;184275;184276;184277 184272 14 LASAGVDTNVR Unmodified 1101.5778 0.57783619 2235 Q13112 CHAF1B Chromatin assembly factor 1 subunit B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.478 30.667 2 0.0012018 32901 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 74.376 11.718 80309000 0 0 0 4355600 3602400 4497300 5269900 3938100 2334900 7273100 9098600 12513000 7585600 6347300 13494000 27521 2235 25127 231851;231852;231853;231854;231855;231856;231857;231858;231859;231860;231861;231862 184278;184279;184280;184281;184282;184283;184284;184285;184286;184287;184288 184282 10 LASALAPSIYEHEDIK Unmodified 1755.9043 0.90431529 1332 P33991 MCM4 DNA replication licensing factor MCM4 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 69.931 68.648 2;3 2.3946E-23 77306 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 119.39 95.781 10556000 0 0 2583900 0 0 0 0 0 0 0 0 0 0 0 7972200 27522 1332 25128 231863;231864 184289;184290 184289 2 LASALAPSIYEHEDIKK Unmodified 1883.9993 0.9992783 1332 P33991 MCM4 DNA replication licensing factor MCM4 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 58.804 58.991 3 0.00061031 67093 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 48.423 43.319 88219000 0 0 0 0 2613300 4052000 4467400 6092100 0 8021700 11085000 10313000 6303400 11332000 23940000 27523 1332 25129 231865;231866;231867;231868;231869;231870;231871;231872;231873;231874 184291;184292 184292 2 LASALDLPLLR Unmodified 1180.718 0.71795849 2183 Q12768 KIAA0196 WASH complex subunit strumpellin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 89.566 89.699 2 0.00015167 104147 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 108.98 93.827 30693000 0 0 0 0 0 2892000 2010800 2645300 0 4506000 2545900 2653700 2226400 3582500 7630000 27524 2183 25130 231875;231876;231877;231878;231879;231880;231881;231882;231883 184293;184294;184295;184296;184297;184298;184299;184300;184301 184295 8 LASALLAEQEPQPER Unmodified 1650.8577 0.85769944 654 O95396 MOCS3 Adenylyltransferase and sulfurtransferase MOCS3;Molybdopterin-synthase adenylyltransferase;Molybdopterin-synthase sulfurtransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 61.282 61.431 2 8.5986E-19 69415 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 134.13 112.1 46115000 0 0 0 0 2546400 4563300 3006000 0 0 7203100 0 8662200 4765600 5350400 10018000 27525 654 25131 231884;231885;231886;231887;231888;231889;231890;231891;231892 184302;184303;184304;184305;184306;184307;184308;184309;184310 184305 9 LASAQEVAGSTSAK Unmodified 1318.6729 0.67285879 3285 Q8IYL3 C1orf174 UPF0688 protein C1orf174 yes yes 0 0 0 By MS/MS By matching By matching By matching 10 0 4 1 1 1 1 27.006 27.067 2 0.00049574 29237 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 85.958 63.872 8551100 0 0 0 0 2649400 0 2099300 0 1280300 0 2522100 0 0 0 0 27526 3285 25132 231893;231894;231895;231896 184311 184311 1 LASAQQLEGERK Unmodified 1328.7048 0.70482762 5337 yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 30.418 30.562 3 0.024587 32882 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 46.796 20.138 + 7721000 0 0 0 0 0 0 0 0 1364100 6356900 0 0 0 0 0 27527 5337 25133 231897;231898 184312 184312 0 LASAYGAR Unmodified 807.4239 0.42390173 2157 Q08380 LGALS3BP Galectin-3-binding protein yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 15.864 15.934 2 0.023059 14483 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 60.648 10.109 37837000 0 0 0 4805900 3945900 3540200 4447600 0 0 5715000 0 6265500 0 9116900 0 27528 2157 25134 231899;231900;231901;231902;231903;231904;231905 184313;184314;184315 184314 3 LASCSDDRTVR Unmodified 1278.5986 0.59864799 575 O76071 CIAO1 Probable cytosolic iron-sulfur protein assembly protein CIAO1 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 10.235 10.369 3 0.007522 8056 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 38.783 27.57 70019000 0 0 0 5369600 3327000 4265600 5686900 4752200 0 5118600 8785100 6556500 7842200 7093000 11222000 27529 575 25135 231906;231907;231908;231909;231910;231911;231912;231913;231914;231915;231916 184316;184317;184318;184319;184320;184321;184322;184323 184322 6 LASDAGIFFTR Unmodified 1196.619 0.61897272 4592 Q9NR46 SH3GLB2 Endophilin-B2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.778 76.838 2 0.00050177 88795 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 98.048 85.46 443160000 0 0 0 13320000 18939000 34147000 27814000 42166000 29621000 46255000 51446000 46715000 53529000 29801000 49405000 27530 4592 25136 231917;231918;231919;231920;231921;231922;231923;231924;231925;231926;231927;231928 184324;184325;184326;184327;184328;184329;184330;184331 184331 8 LASDSDAESDSR Unmodified 1251.5215 0.5215031 3590 Q8WXG6 MADD MAP kinase-activating death domain protein yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 8.0701 8.2338 2 0.0010299 6817 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 83 72.768 48427000 0 0 0 0 3093800 2796100 0 3544500 4296400 3571300 13649000 0 6245500 4397000 6833600 27531 3590 25137 231929;231930;231931;231932;231933;231934;231935;231936;231937;231938 184332;184333;184334;184335 184332 3 LASEEPPDDEEALATIR Unmodified 1854.8847 0.88470206 4831 Q9UBB4 ATXN10 Ataxin-10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 1 2 2 2 2 2 2 69.592 69.664 2;3 5.3295E-128 80106 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 204.48 163.32 451400000 0 0 0 21133000 20740000 40286000 34219000 31075000 11283000 61738000 48149000 42849000 36955000 35774000 67204000 27532 4831 25138 231939;231940;231941;231942;231943;231944;231945;231946;231947;231948;231949;231950;231951;231952;231953;231954;231955;231956;231957;231958;231959;231960;231961 184336;184337;184338;184339;184340;184341;184342;184343;184344;184345;184346 184336 10 LASEFFVDGLDSDESTLEHFK Unmodified 2385.1012 0.10123677 4173 Q9BV29 C15orf57 Uncharacterized protein C15orf57 yes yes 0 0 0 By MS/MS 2 0 1 1 94.768 86.638 3 5.3008E-10 112085 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.748 73.691 10073000 10073000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27533 4173 25139 231962 184347;184348 184348 2 LASEILMQNWDAAMEDLTRLK Unmodified 2447.2189 0.21886626 1809 P60228 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 0 0 1 By MS/MS 3 0 1 1 100.07 96.66 3 0.0071902 115910 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 29.126 24.87 2925800 0 2925800 0 0 0 0 0 0 0 0 0 0 0 0 0 27534 1809 25140 231963 184349 184349 1 LASEPQDPAAVSLPTSSVPETR Unmodified 2251.1332 0.1332056 2910 Q6NZ67;Q6P582 MZT2B;MZT2A Mitotic-spindle organizing protein 2B;Mitotic-spindle organizing protein 2A yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 73.796 73.857 2;3 9.3911E-86 85100 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 154.69 148 500870000 0 0 0 26865000 37273000 48314000 38176000 39713000 29775000 39340000 51767000 53641000 31716000 33264000 71030000 27535 2910 25141 231964;231965;231966;231967;231968;231969;231970;231971;231972;231973;231974;231975;231976;231977;231978;231979;231980;231981;231982;231983;231984;231985;231986;231987 184350;184351;184352;184353;184354;184355;184356;184357;184358;184359;184360;184361;184362;184363;184364;184365;184366;184367;184368;184369;184370;184371 184359 20 LASEYLTPEEMVTFK Oxidation (M) 1772.8543 0.85425355 312 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.648 76.706 2 4.403E-19 88646 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 108.35 100.03 71547000 0 0 0 2904500 3891700 6390600 4728800 5165300 7151600 6378900 6859300 8123300 5103400 5972600 8877200 27536 312 25142 231988;231989;231990;231991;231992;231993;231994;231995;231996;231997;231998;231999 184372;184373;184374;184375;184376;184377;184378;184379;184380;184381;184382 184377 403 11 LASEYLTPEEMVTFK Unmodified 1756.8593 0.85933893 312 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 85.196 85.364 2 0.0012656 98624 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.175 36.397 8067600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8067600 27537 312 25142 232000 184383 184383 1 LASEYNWGGPESSDK Unmodified 1638.7162 0.71618016 3907 Q96KG9 SCYL1 N-terminal kinase-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 52.684 52.888 2 2.0803E-83 59099 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 185.3 173.43 354680000 0 0 0 12273000 0 27409000 15601000 18272000 17688000 27712000 28524000 25173000 127820000 25308000 28892000 27538 3907 25143 232001;232002;232003;232004;232005;232006;232007;232008;232009;232010;232011 184384;184385;184386;184387;184388;184389;184390;184391;184392;184393 184393 10 LASFFLSR Unmodified 939.5178 0.51780212 3296 Q8IZL8 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.221 76.266 2 0.0059797 87043 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 104.75 82.976 121420000 0 0 0 6017900 6593700 9497700 9876300 9770100 0 10582000 8172000 16997000 0 15205000 28711000 27539 3296 25144 232012;232013;232014;232015;232016;232017;232018;232019;232020;232021;232022;232023 184394;184395;184396;184397;184398;184399;184400;184401;184402;184403;184404 184400 11 LASFYER Unmodified 884.43922 0.43921744 1398 P38606 ATP6V1A V-type proton ATPase catalytic subunit A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.628 40.806 2 0.034409 46442 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 71.296 41.958 261060000 0 0 0 17527000 12168000 28562000 20192000 10172000 9697500 26986000 29090000 26868000 16764000 24687000 38344000 27540 1398 25145 232024;232025;232026;232027;232028;232029;232030;232031;232032;232033;232034;232035 184405;184406;184407;184408 184408 3 LASGEDDPFDSDFSCPVK Unmodified 1984.836 0.8360373 4023 Q99567 NUP88 Nuclear pore complex protein Nup88 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 77.125 76.257 2 5.9329E-73 93409 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 218.5 198.29 644310000 8832500 272950000 0 17002000 23643000 21706000 17973000 36991000 23789000 27548000 27264000 44949000 29399000 42024000 50247000 27541 4023 25146 232036;232037;232038;232039;232040;232041;232042;232043;232044;232045;232046;232047;232048;232049;232050 184409;184410;184411;184412;184413;184414;184415;184416;184417;184418;184419;184420;184421;184422;184423 184412 15 LASGETVAAFCLTEPSSGSDAASIR Unmodified 2496.1802 0.18023215 1591 P49748 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 2 1 2 2 2 1 1 2 80.842 80.931 2;3 1.0579E-50 93741 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 140.74 129.12 67611000 0 0 0 0 4337600 0 0 0 3221900 12804000 16238000 9273100 2696300 3429400 15610000 27542 1591 25147 232051;232052;232053;232054;232055;232056;232057;232058;232059;232060;232061;232062;232063 184424;184425;184426;184427;184428;184429;184430;184431 184428 8 LASGFGEDVDGYCDTIVAVAEVIK Unmodified 2527.2152 0.21522067 419 O60645 EXOC3 Exocyst complex component 3 yes yes 0 0 0 By MS/MS 2 0 1 1 99.236 91.105 3 0.026308 117491 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 11.592 4.4913 14839000 14839000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27543 419 25148 232064 184432 184432 1 LASGSFDK Unmodified 823.40758 0.40758296 3887 Q96J01 THOC3 THO complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 19.107 19.403 2 0.033696 19748 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 53.554 17.369 103830000 0 0 0 0 9652700 0 0 0 7596100 13460000 14914000 17511000 15439000 0 25259000 27544 3887 25149 232065;232066;232067;232068;232069;232070;232071 184433;184434;184435;184436;184437 184433 4 LASGVEGSDIPDDGK Unmodified 1458.6838 0.6838174 684 O95747 OXSR1 Serine/threonine-protein kinase OSR1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.88 3.69 2 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 49.679 49.447 2 2.3035E-27 45724 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 136.27 126.04 428500000 32815000 37176000 0 15886000 14863000 34537000 26357000 18882000 16828000 34639000 39843000 41150000 31853000 29350000 54327000 27545 684 25150 232072;232073;232074;232075;232076;232077;232078;232079;232080;232081;232082;232083;232084;232085;232086;232087 184438;184439;184440;184441;184442;184443;184444;184445;184446;184447;184448;184449;184450;184451;184452;184453;184454;184455 184449 16 LASHMVMK 2 Oxidation (M) 947.45686 0.45685812 4094 Q9BQE5 APOL2 Apolipoprotein L2 yes yes 0 2 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 5.8345 5.9703 2 0.0033996 3670 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 79.469 63.832 45054000 0 0 0 3732700 0 3011500 5060300 3533700 0 5143700 3400200 5244700 7309300 4601000 4016500 27546 4094 25151 232088;232089;232090;232091;232092;232093;232094;232095;232096;232097 184456;184457;184458;184459;184460;184461 184456 5597;5598 6 LASHMVMK Oxidation (M) 931.46194 0.4619435 4094 Q9BQE5 APOL2 Apolipoprotein L2 yes yes 0 1 0 By MS/MS 2 0 1 1 13.601 11.32 2 0.042776 14394 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 66.799 36.131 4638700 0 0 4638700 0 0 0 0 0 0 0 0 0 0 0 0 27547 4094 25151 232098 184462 184462 5597;5598 1 LASHMVMK Unmodified 915.46703 0.46702887 4094 Q9BQE5 APOL2 Apolipoprotein L2 yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 20.269 20.554 2 0.034963 20770 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 52.786 8.0646 76362000 0 0 0 6906000 0 0 5425500 0 0 0 0 24539000 13438000 16203000 9850600 27548 4094 25151 232099;232100;232101;232102;232103;232104 184463 184463 1 LASIDEK Unmodified 774.41233 0.41233399 2146 Q07960 ARHGAP1 Rho GTPase-activating protein 1 yes yes 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 17.887 18.104 2 0.039143 16951 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.176 8.3769 163350000 0 0 0 0 10265000 24787000 14648000 0 11509000 22859000 17663000 20800000 0 18757000 22065000 27549 2146 25152 232105;232106;232107;232108;232109;232110;232111;232112;232113 184464 184464 1 LASILTSAAR Unmodified 1001.5869 0.58694431 2230 Q13057 COASY Bifunctional coenzyme A synthase;Phosphopantetheine adenylyltransferase;Dephospho-CoA kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 54.752 54.888 2 0.0019472 62074 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 87.476 48.684 248950000 0 0 0 14702000 13294000 29635000 16775000 19405000 10893000 30266000 21996000 17782000 18303000 21346000 34556000 27550 2230 25153 232114;232115;232116;232117;232118;232119;232120;232121;232122;232123;232124;232125 184465;184466;184467;184468;184469;184470;184471;184472;184473;184474;184475 184469 11 LASLEELK Unmodified 901.51205 0.51204804 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54.065 52.983 2 0.0068825 59266 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 92.47 13.354 2074200000 5315500 348010000 6693700 289040000 66918000 92296000 63681000 239940000 111200000 101230000 133230000 229750000 208530000 57643000 120700000 27551 1029 25154 232126;232127;232128;232129;232130;232131;232132;232133;232134;232135;232136;232137;232138;232139;232140 184476;184477;184478;184479;184480;184481;184482;184483;184484;184485;184486 184483 6 LASLEELKR Unmodified 1057.6132 0.61315906 1029 P15924 DSP Desmoplakin yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 44.265 44.078 2 0.042414 49370 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 82.279 51.667 24624000 0 0 0 9093600 0 0 0 15530000 0 0 0 0 0 0 0 27552 1029 25155 232141;232142 184487 184487 0 LASLQQENK Unmodified 1029.5455 0.54547343 2598 Q16204 CCDC6 Coiled-coil domain-containing protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.924 19.12 2 0.00039003 18188 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 147.04 78.823 154080000 0 0 0 7745900 8265600 8346700 10049000 6763700 6899500 15492000 17872000 16936000 13453000 13170000 29091000 27553 2598 25156 232143;232144;232145;232146;232147;232148;232149;232150;232151;232152;232153;232154 184488;184489;184490;184491;184492;184493;184494;184495;184496;184497;184498;184499;184500 184491 13 LASMSNDFK Unmodified 1011.4695 0.46953129 2251 Q13190 STX5 Syntaxin-5 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 38.238 38.607 2 0.013293 41679 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.019 28.084 20730000 0 0 0 0 3666300 0 0 0 0 0 4743200 7033600 0 0 5287200 27554 2251 25157 232155;232156;232157;232158 184501;184502 184501 2 LASMSNDFK Oxidation (M) 1027.4644 0.46444592 2251 Q13190 STX5 Syntaxin-5 yes yes 0 1 0 By MS/MS 10 0 1 1 19.392 20.013 2 0.014019 20020 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 52.403 34.708 3399000 0 0 0 0 0 0 0 0 0 0 0 3399000 0 0 0 27555 2251 25157 232159 184503 184503 3658 1 LASMSPIGTDLETVK Unmodified 1560.8069 0.80690943 2086 Q03001 DST Dystonin yes yes 0 0 0 By MS/MS 2 0 1 1 80.429 75.717 2 0.0071023 94263 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.846 8.6217 86183000 0 86183000 0 0 0 0 0 0 0 0 0 0 0 0 0 27556 2086 25158 232160 184504 184504 1 LASPELER Unmodified 913.4869 0.48689592 1054 P17535;P05412 JUND;JUN Transcription factor jun-D;Transcription factor AP-1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 34.595 34.796 2 0.030437 38187 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 55.531 24.241 45815000 0 0 0 6293800 0 0 9538600 0 0 0 0 13546000 8082000 8354400 0 27557 1054 25159 232161;232162;232163;232164;232165 184505;184506;184507;184508;184509 184507 5 LASPSGSTSSGLEVVAPEGTSAPGGGPGTLDDSATICR Unmodified 3557.6791 0.67914932 2262 Q13263 TRIM28 Transcription intermediary factor 1-beta yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 79.43 79.572 3 9.3258E-49 91980 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 67.015 55.63 54565000 0 0 0 0 0 5231300 0 4188700 0 11118000 9275100 8517300 0 5318200 10917000 27558 2262 25160 232166;232167;232168;232169;232170;232171;232172 184510;184511;184512;184513;184514 184510 5 LASQADSTEQVDDTILT Unmodified 1805.8531 0.85306758 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.58 3.17 1 1 10 2 1 1 1 1 1 1 1 1 1 1 73.609 73.444 2 1.8101E-38 80818 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 153.74 147.89 310620000 19089000 0 0 0 27131000 31702000 30905000 25650000 17327000 40164000 0 42985000 0 34453000 41218000 27559 3641 25161 232173;232174;232175;232176;232177;232178;232179;232180;232181;232182;232183;232184 184515;184516;184517;184518;184519;184520;184521;184522 184517 8 LASQANIAQVLAELK Unmodified 1567.8934 0.89335667 2178;1937 P63010;Q10567 AP2B1;AP1B1 AP-2 complex subunit beta;AP-1 complex subunit beta-1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 2 92.413 92.549 2;3 0.00025871 107443 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 102.97 78.679 47043000 0 0 0 0 0 0 0 0 0 11193000 4442700 3648700 0 3562000 24196000 27560 1937;2178 25162 232185;232186;232187;232188;232189;232190 184523;184524;184525;184526 184525 3 LASQGDSISSQLGPIHPPPR Unmodified 2056.0702 0.070151836 3690 Q92945 KHSRP Far upstream element-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 2 1 1 2 1 2 1 2 2 1 2 2 66.231 66.343 2;3 3.2256E-87 76305 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 168.89 156.59 1197700000 0 0 0 48563000 54988000 81055000 81274000 71221000 69378000 110870000 114540000 143280000 73921000 114710000 233860000 27561 3690 25163 232191;232192;232193;232194;232195;232196;232197;232198;232199;232200;232201;232202;232203;232204;232205;232206;232207;232208;232209 184527;184528;184529;184530;184531;184532;184533;184534;184535;184536;184537;184538;184539;184540;184541;184542;184543;184544;184545;184546;184547;184548;184549;184550;184551;184552;184553 184527 25 LASQLGVYK Unmodified 977.55458 0.55458155 2219 Q12979 ABR Active breakpoint cluster region-related protein yes yes 0 0 0 By MS/MS 10 0 1 1 43.688 43.739 2 0.042663 49112 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 60.972 13.056 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27562 2219 25164 232210 184554 184554 1 LASQPGTQGTSSAEAPR Acetyl (Protein N-term) 1698.8173 0.81729119 5405 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 2 2 2 1 1 1 1 1 1 79.66 79.7 2 0.00083864 92008 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 45.911 10.4 + 6658800000 0 0 0 1171600000 0 708670000 0 2160700000 217710000 0 338140000 957160000 548800000 310510000 245540000 27563 5405 25165 232211;232212;232213;232214;232215;232216;232217;232218;232219;232220;232221;232222 184555;184556;184557;184558 184555 3 LASSDTGESDQSSTETDSTVK Unmodified 2143.9241 0.92406027 3745 Q96AY4 TTC28 Tetratricopeptide repeat protein 28 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 22.137 22.321 2 4.5561E-15 22139 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 107.14 107.14 45193000 0 0 0 3379400 1751500 3963200 0 4657900 3136000 6568400 6672800 0 4627600 3976100 6460300 27564 3745 25166 232223;232224;232225;232226;232227;232228;232229;232230;232231;232232 184559;184560;184561;184562;184563 184562 5 LASSELER Unmodified 903.46616 0.46616048 1052 P17275 JUNB Transcription factor jun-B yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By matching 10 0 8 1 1 1 1 1 1 1 1 22.977 23.119 2 0.039082 24105 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 85.642 50.392 81716000 0 0 0 9445400 0 7248000 8766500 6466700 7642800 16734000 10565000 0 14848000 0 0 27565 1052 25167 232233;232234;232235;232236;232237;232238;232239;232240 184564 184564 0 LASSGALR Unmodified 773.43955 0.43955179 4114 Q9BRQ8 AIFM2 Apoptosis-inducing factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.283 16.46 2 0.029462 15643 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 56.122 11.149 119960000 0 0 0 6141400 5150600 7612100 8267700 7437200 5858900 11520000 16296000 14423000 12397000 10062000 14797000 27566 4114 25168 232241;232242;232243;232244;232245;232246;232247;232248;232249;232250;232251;232252 184565 184565 1 LASSILPNGAESLK Unmodified 1398.7718 0.77184455 5041 Q9UNS1 TIMELESS Protein timeless homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 70.784 70.228 2 0.00062288 88152 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.74 93.935 234660000 0 168390000 0 3065000 0 7741100 5516600 4203500 5156900 6810700 9155500 9222700 4702300 4439900 6252600 27567 5041 25169 232253;232254;232255;232256;232257;232258;232259;232260;232261;232262;232263;232264;232265 184566;184567;184568 184566 2 LASSLPGLAQISNQASGLK Unmodified 1854.0211 0.021076378 4823 Q9P2N6 KANSL3 KAT8 regulatory NSL complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 83.588 83.58 2 0.00028699 96462 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.891 47.168 8898700 0 0 0 0 1439900 2201900 0 0 0 0 0 0 0 0 5256900 27568 4823 25170 232266;232267;232268;232269 184569;184570;184571 184570 3 LASTFHSTSCLR Unmodified 1378.6663 0.66633362 4758 Q9NZ09 UBAP1 Ubiquitin-associated protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.281 35.463 3 0.01209 37685 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.218 28.081 126440000 0 0 0 4594300 6232400 7517800 6542700 6360100 9202900 10947000 13013000 16111000 16801000 12375000 16738000 27569 4758 25171 232270;232271;232272;232273;232274;232275;232276;232277;232278;232279;232280;232281 184572;184573;184574;184575;184576;184577;184578 184573 7 LASTGSGQSFLAR Unmodified 1293.6677 0.66771383 3174 Q86VS8 HOOK3 Protein Hook homolog 3 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 48.69 48.541 2 0.027375 55161 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 35.664 12.593 7761300 0 0 0 0 3826300 0 0 0 0 0 0 0 0 3935000 0 27570 3174 25172 232282;232283 184579 184579 1 LASTGTSEYAAYDQNITPLHTDFSGSSTERI Unmodified 3331.5481 0.54805879 3996 Q96SY0 VWA9 von Willebrand factor A domain-containing protein 9 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 83.63 80.145 3 2.1557E-78 99768 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.89 117.31 58965000 0 53652000 5313700 0 0 0 0 0 0 0 0 0 0 0 0 27571 3996 25173 232284;232285;232286 184580;184581;184582 184580 3 LASTIADNQEQDLEK Unmodified 1673.8108 0.81080883 3964 Q96R06 SPAG5 Sperm-associated antigen 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 45.927 45.32 2 1.7053E-168 51118 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 218.54 193.07 472010000 0 73358000 0 23165000 23122000 28047000 25711000 23377000 21775000 34993000 42032000 53421000 45334000 33720000 43955000 27572 3964 25174 232287;232288;232289;232290;232291;232292;232293;232294;232295;232296;232297;232298;232299;232300 184583;184584;184585;184586;184587;184588;184589;184590;184591;184592;184593;184594;184595 184590 13 LASTLVHLGEYQAAVDGAR Unmodified 1970.0221 0.022139011 2040 Q00610 CLTC Clathrin heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 1 1 1 1 2 2 2 2 2 2 76.058 76.191 3 1.8981E-13 87696 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 99.413 88.82 334250000 0 0 0 0 5802300 20456000 6381600 16701000 11838000 37917000 32022000 31561000 14893000 24023000 132650000 27573 2040 25175 232301;232302;232303;232304;232305;232306;232307;232308;232309;232310;232311;232312;232313;232314;232315;232316;232317 184596;184597;184598;184599;184600;184601;184602;184603;184604 184599 6 LASTNSSVLGADLPSSMK Oxidation (M) 1792.8877 0.88767894 2289 Q13428 TCOF1 Treacle protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.759 62.855 2 3.1716E-128 71796 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 201.48 185.89 397220000 0 0 0 25413000 28591000 25416000 31228000 28185000 21523000 38329000 43211000 46698000 37243000 30406000 40973000 27574 2289 25176 232318;232319;232320;232321;232322;232323;232324;232325;232326;232327;232328;232329 184605;184606;184607;184608;184609;184610;184611;184612;184613;184614;184615;184616;184617 184615 3725 13 LASTNSSVLGADLPSSMK Unmodified 1776.8928 0.89276432 2289 Q13428 TCOF1 Treacle protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 74.339 74.031 2 5.7735E-129 85317 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 204.28 185.15 457510000 0 57907000 0 20509000 21093000 25817000 18312000 29620000 16842000 32088000 43804000 54885000 31969000 36163000 68498000 27575 2289 25176 232330;232331;232332;232333;232334;232335;232336;232337;232338;232339;232340;232341;232342 184618;184619;184620;184621;184622;184623;184624;184625;184626;184627;184628;184629;184630;184631 184619 14 LASTPFK Unmodified 762.42759 0.42759012 1446 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34.233 33.382 2 0.023879 36580 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 94.163 28.9 2374200000 330380000 554670000 25029000 93706000 80196000 97908000 96324000 92317000 69507000 139000000 153470000 203110000 149090000 107930000 181560000 27576 1446 25177 232343;232344;232345;232346;232347;232348;232349;232350;232351;232352;232353;232354;232355;232356;232357 184632;184633;184634;184635;184636;184637;184638 184632 7 LASVLGSEPSLDSEVTSK Unmodified 1817.9258 0.92583859 4737 Q9NY33 DPP3 Dipeptidyl peptidase 3 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.86 3.4 1 1 5 2 1 1 1 1 1 75.238 74.212 2 9.3656E-71 91548 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 170 152.2 251250000 0 167410000 0 0 0 0 0 0 0 3690600 16051000 13031000 0 11439000 39625000 27577 4737 25178 232358;232359;232360;232361;232362;232363;232364 184639;184640;184641;184642;184643;184644;184645 184639 7 LASVLPEVKPK Unmodified 1179.7227 0.72270951 202 O14686 KMT2D Histone-lysine N-methyltransferase 2D yes yes 0 0 1 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 52.248 52.698 3 0.012957 58561 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.343 34.042 50107000 0 0 0 0 0 0 0 0 0 5003200 0 24049000 7865200 0 13189000 27578 202 25179 232365;232366;232367;232368 184646 184646 1 LASVPAGGAVAVSAAPGSAAPAAGSAPAAAEEK Unmodified 2773.4246 0.4246366 807 P05387 RPLP2 60S acidic ribosomal protein P2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.02 2.63 1 3 1 36 2 2 1 3 3 3 3 3 3 3 3 3 3 3 3 71.395 71.088 2;3;4 1.1361E-79 92620 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 116.45 104.13 4079400000 258540000 122470000 4697500 145710000 210300000 194590000 203040000 204670000 136480000 272190000 457360000 493750000 401230000 385590000 588770000 27579 807 25180 232369;232370;232371;232372;232373;232374;232375;232376;232377;232378;232379;232380;232381;232382;232383;232384;232385;232386;232387;232388;232389;232390;232391;232392;232393;232394;232395;232396;232397;232398;232399;232400;232401;232402;232403;232404;232405;232406;232407;232408;232409 184647;184648;184649;184650;184651;184652;184653;184654;184655;184656;184657;184658;184659;184660;184661;184662;184663;184664;184665;184666;184667;184668;184669;184670;184671;184672;184673;184674;184675 184661 20 LASVPEYR Unmodified 933.49198 0.4919813 2019 P85037 FOXK1 Forkhead box protein K1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 39.201 39.366 2 0.00017401 42553 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 154.31 78.997 440360000 0 0 0 32373000 25766000 41241000 34696000 33884000 27860000 41629000 46706000 52428000 0 43106000 60666000 27580 2019 25181 232410;232411;232412;232413;232414;232415;232416;232417;232418;232419;232420 184676;184677;184678;184679;184680;184681;184682;184683;184684;184685;184686;184687;184688;184689 184686 14 LASVPGSQTVVVK Unmodified 1283.7449 0.74490152 171 O00592 PODXL Podocalyxin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 15 1 2 1 1 1 1 2 2 1 1 1 1 52.709 52.828 2 0.003676 59699 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 52.579 33.484 158380000 0 0 0 5740400 17610000 7145600 8861700 7162800 5771800 17656000 23815000 17489000 16905000 14868000 15358000 27581 171 25182 232421;232422;232423;232424;232425;232426;232427;232428;232429;232430;232431;232432;232433;232434;232435 184690;184691;184692;184693;184694;184695;184696;184697 184690 8 LASYLDK Unmodified 808.43307 0.43306943 56;70;1354;72;84;76;68 CON__P13645;P13645;CON__P02533;P02533;CON__P08779;P08779;CON__P19012;P19012;P35527;CON__P35527;CON__Q04695;Q04695;CON__P08727;P08727 KRT10;KRT14;KRT16;KRT15;KRT9;KRT17;KRT19 Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16;Keratin, type I cytoskeletal 15;Keratin, type I cytoskeletal 9;Keratin, type I cytoskeletal 17;Keratin, type I cytoskeletal 19 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 30.893 31.082 1;2 6.5676E-09 34343 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 167.24 68.821 + 125140000000 0 0 0 18437000000 8452200000 10071000000 7334000000 15499000000 6784100000 11732000000 9418300000 14904000000 11626000000 6290900000 4591400000 27582 72;56;70;76;1354;84;68 25183 232436;232437;232438;232439;232440;232441;232442;232443;232444;232445;232446;232447;232448;232449;232450;232451;232452;232453;232454;232455;232456;232457;232458;232459 184698;184699;184700;184701;184702;184703;184704;184705;184706;184707;184708;184709;184710;184711;184712;184713;184714;184715;184716;184717;184718;184719;184720;184721;184722;184723;184724;184725;184726;184727;184728;184729;184730;184731;184732;184733;184734;184735;184736 184732 38 LASYLDR Unmodified 836.43922 0.43921744 814 P05783 KRT18 Keratin, type I cytoskeletal 18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.048 35.229 2 0.017052 39157 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 114.72 84.651 3110600000 0 0 0 204620000 244160000 339060000 231580000 234600000 173580000 329390000 304800000 425020000 350550000 270290000 2901700 27583 814 25184 232460;232461;232462;232463;232464;232465;232466;232467;232468;232469;232470;232471 184737;184738;184739;184740;184741;184742;184743;184744;184745;184746;184747;184748 184748 9 LASYLEK Unmodified 822.44872 0.4487195 73;981;106;86;87;94 CON__P13646-1;P13646;CON__ENSEMBL:ENSP00000377550;Q9C075;CON__Q9C075;CON__Q497I4;CON__Q14525;Q14525;CON__Q15323;CON__Q9UE12;Q15323 KRT13;KRT23;KRT33B;KRT31 Keratin, type I cytoskeletal 13;Keratin, type I cytoskeletal 23;Keratin, type I cuticular Ha3-II;Keratin, type I cuticular Ha1 no no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 2 2 1 2 2 1 31.877 32.109 1;2 0.023356 34890 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 89.55 37.977 + 758780000 0 0 0 0 19853000 0 203180000 364740000 6861800 0 0 86206000 68705000 9239100 0 27584 73;981;106;94;86;87 25185 232472;232473;232474;232475;232476;232477;232478;232479;232480;232481;232482 184749;184750;184751;184752 184751 3 LATALQK Unmodified 743.45414 0.45413923 1957;90;853;831;884 CON__Q3SX28;P06753;P07951;P09493;P67936 TPM3;TPM2;TPM1;TPM4 Tropomyosin alpha-3 chain;Tropomyosin beta chain;Tropomyosin alpha-1 chain;Tropomyosin alpha-4 chain no no 0 0 0 By matching By MS/MS By matching By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 20.088 20.462 1 0.047006 21160 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 131.04 24.751 + 141310000 0 0 0 9126200 0 0 0 0 0 0 38817000 34296000 19372000 13896000 25800000 27585 90;831;853;884;1957 25186 232483;232484;232485;232486;232487;232488 184753;184754 184754 0 LATAMQEGEYDAERPPSKPPPVELR Oxidation (M) 2796.3752 0.37524356 2391 Q14203 DCTN1 Dynactin subunit 1 yes yes 0 1 2 By MS/MS By MS/MS 10 0 2 1 1 58.305 58.432 4 5.3057E-06 66485 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 42.806 39.405 22318000 0 0 0 0 0 12499000 0 0 0 0 0 0 9819400 0 0 27586 2391 25187 232489;232490 184755;184756 184755 3891 2 LATAQFK Unmodified 777.43849 0.43848916 4260 Q9BZD4 NUF2 Kinetochore protein Nuf2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 30.072 25.666 2 0.036783 35696 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.287 36.521 153510000 46605000 103550000 3350700 0 0 0 0 0 0 0 0 0 0 0 0 27587 4260 25188 232491;232492;232493 184757 184757 1 LATCSSDR Unmodified 908.40218 0.40218001 1769 P55735 SEC13 Protein SEC13 homolog yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 6.1741 6.2155 2 0.017693 4266 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 65.252 36.103 12645000 0 0 0 1318800 1984900 2984600 0 2942100 2739000 675540 0 0 0 0 0 27588 1769 25189 232494;232495;232496;232497;232498;232499 184758;184759;184760 184760 3 LATEGSSGATEK Unmodified 1149.5513 0.55134667 4691 Q9NW68 BSDC1 BSD domain-containing protein 1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 8.4076 8.5372 2 5.943E-08 7013 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 119.53 101.62 74724000 0 0 0 3985900 3780200 3081300 4012800 4756100 4097200 4200900 19751000 6776700 8760400 4834500 6686800 27589 4691 25190 232500;232501;232502;232503;232504;232505;232506;232507;232508;232509;232510;232511 184761;184762;184763;184764;184765;184766 184765 5 LATELPDAELRR Unmodified 1382.7518 0.75177781 3704 Q93034 CUL5 Cullin-5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 55.59 55.78 3 0.0017192 63400 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 45.257 28.315 33499000 0 0 0 0 0 9172800 4878300 0 0 6594100 7804200 0 5049600 0 0 27590 3704 25191 232512;232513;232514;232515;232516 184767;184768;184769;184770;184771 184767 5 LATELYHQK Unmodified 1101.5819 0.58185893 2125 Q06210 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.23 3.24 2 1 10 1 1 1 1 1 1 1 1 1 1 1 1 1 29.486 28.547 2 0.0035332 30214 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 89.752 65.959 643920000 426510000 7792500 152250000 0 3395400 4732400 3432500 2610300 2874600 6909600 7450700 0 5253300 5525700 15194000 27591 2125 25192 232517;232518;232519;232520;232521;232522;232523;232524;232525;232526;232527;232528;232529 184772;184773;184774;184775;184776;184777;184778;184779;184780 184777 9 LATEVNWDEEK Unmodified 1332.6198 0.61976058 1418 P40692 MLH1 DNA mismatch repair protein Mlh1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 52.558 52.653 2 0.0022548 59681 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 87.895 64.842 187920000 0 0 0 6581500 11479000 19703000 15729000 13335000 12098000 26129000 23196000 26177000 17859000 15634000 0 27592 1418 25193 232530;232531;232532;232533;232534;232535;232536;232537;232538;232539;232540 184781;184782;184783;184784;184785;184786;184787;184788;184789;184790;184791;184792 184787 11 LATEYMSSARSLSSEEK Unmodified 1887.8884 0.88840723 5035 Q9UNL4 ING4 Inhibitor of growth protein 4 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 58.499 52.452 3 0.00065235 70941 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 59.862 41.03 14964000 12451000 0 2512800 0 0 0 0 0 0 0 0 0 0 0 0 27593 5035 25194 232541;232542 184793;184794 184793 2 LATGEEEGGGSSSK Unmodified 1307.5841 0.58410336 731 P00519 ABL1 Tyrosine-protein kinase ABL1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 8.0228 8.1536 2 6.3699E-20 5912 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 140.78 129.56 53910000 0 0 0 2096900 2365000 2700500 3445600 2926300 2792200 3821700 11094000 7518100 4679700 3585900 6883800 27594 731 25195 232543;232544;232545;232546;232547;232548;232549;232550;232551;232552;232553;232554 184795;184796;184797;184798;184799;184800;184801;184802;184803;184804;184805 184800 11 LATGSDDNCAAFFEGPPFK Unmodified 2042.9044 0.90439164 453 O75083 WDR1 WD repeat-containing protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 83.861 84.052 3 0.00018448 97111 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.784 48.075 8267700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8267700 27595 453 25196 232555 184806;184807 184807 2 LATLGGSQALGLDGEIGNFEVGK Unmodified 2245.159 0.15902642 5118 Q9Y2T3 GDA Guanine deaminase yes yes 0 0 0 By MS/MS 2 0 1 1 93.119 88.209 2 2.2586E-13 109595 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.89 77.254 11152000 0 11152000 0 0 0 0 0 0 0 0 0 0 0 0 0 27596 5118 25197 232556 184808 184808 1 LATLLGLQAPPTR Unmodified 1349.8031 0.8030851 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.566 80.627 2 1.4939E-09 93130 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 116.23 104.46 122490000 0 0 0 4269800 4318600 10427000 5913900 8145900 5161000 13259000 12164000 15059000 7622200 10726000 25421000 27597 2378 25198 232557;232558;232559;232560;232561;232562;232563;232564;232565;232566;232567;232568 184809;184810;184811;184812;184813;184814;184815;184816;184817;184818;184819;184820 184818 12 LATLNEK Unmodified 787.44397 0.44396847 3552 Q8WUW1 BRK1 Protein BRICK1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.934 19.13 2 0.023433 19430 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 85.359 2.0723 92624000 0 0 0 8050500 5252300 6703500 5639100 5604500 4535100 9139300 9611600 11115000 7301200 6606700 13065000 27598 3552 25199 232569;232570;232571;232572;232573;232574;232575;232576;232577;232578;232579;232580 184821 184821 1 LATLNIHDYLTK Unmodified 1400.7664 0.76636524 4345 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 75.398 75.551 3 0.011107 86289 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 34.685 27.314 62154000 0 0 0 0 0 6649700 0 0 0 7026300 7844400 7743200 5860600 6190800 20839000 27599 4345 25200 232581;232582;232583;232584;232585;232586;232587 184822 184822 1 LATLSVR Unmodified 758.46504 0.46503826 3076 Q7Z2Z2 EFTUD1 Elongation factor Tu GTP-binding domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 38.459 38.624 2 0.026498 41631 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 78.616 27.579 50918000 0 0 0 2654800 2813300 5870000 3897900 0 3666200 6488300 7139700 6510300 0 4134500 7742900 27600 3076 25201 232588;232589;232590;232591;232592;232593;232594;232595;232596;232597 184823;184824;184825;184826 184825 4 LATMEDTVEYCLFLIPDESRDSDK Unmodified 2846.299 0.29902666 705 O95905 ECD Protein SGT1 yes yes 0 0 1 By MS/MS 2 0 1 1 97.128 88.998 3 1.2134E-15 114931 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.168 85.288 31619000 31619000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27601 705 25202 232598 184827 184827 1 LATMYSSGSPEGGSDSSESRSEFLEK Unmodified 2737.2025 0.20248373 5004 Q9ULT8 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 0 0 1 By MS/MS By MS/MS 6 4 1 1 1 1 60.971 59.387 3 1.7335E-08 67207 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.638 42.016 15396000 0 0 3719800 0 0 0 0 0 0 0 0 0 0 0 11676000 27602 5004 25203 232599;232600 184828;184829 184828 2 LATMYSSGSPEGGSDSSESRSEFLEK Oxidation (M) 2753.1974 0.19739836 5004 Q9ULT8 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 56.692 50.64 3 3.227E-06 68691 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.589 61.061 15708000 6878700 0 8829700 0 0 0 0 0 0 0 0 0 0 0 0 27603 5004 25203 232601;232602 184830;184831 184830 6348 2 LATNAAVTVLR Unmodified 1127.6663 0.66625727 1641 P50990 CCT8 T-complex protein 1 subunit theta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.717 58.832 2 4.7175E-21 65982 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 169.41 115.25 1012800000 0 0 0 34040000 44171000 104360000 63518000 64817000 39501000 96756000 112510000 84606000 67439000 97703000 203350000 27604 1641 25204 232603;232604;232605;232606;232607;232608;232609;232610;232611;232612;232613;232614 184832;184833;184834;184835;184836;184837;184838;184839;184840;184841;184842;184843;184844 184840 13 LATNTSAPDLK Unmodified 1129.5979 0.59790293 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.884 35.065 2 3.0919E-06 37351 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 143.03 74.119 790410000 0 0 0 46371000 37718000 60327000 46675000 38943000 45278000 76906000 86422000 94900000 77013000 66187000 113670000 27605 1226 25205 232615;232616;232617;232618;232619;232620;232621;232622;232623;232624;232625;232626 184845;184846;184847;184848;184849;184850;184851;184852;184853 184849 6 LATPAGLK Unmodified 769.46979 0.46978929 2489 Q15054 POLD3 DNA polymerase delta subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 3 9 1 1 1 1 1 1 1 1 1 1 1 1 36.986 35.885 2 0.012025 46142 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.43 56.393 548070000 48179000 370540000 10042000 9529600 0 14444000 11648000 0 7722200 14769000 16060000 14356000 0 10580000 20208000 27606 2489 25206 232627;232628;232629;232630;232631;232632;232633;232634;232635;232636;232637;232638 184854;184855;184856;184857;184858;184859;184860;184861;184862;184863;184864 184857 11 LATPELLETAQALER Unmodified 1653.8938 0.8937506 3361 Q8N6R0 METTL13 Methyltransferase-like protein 13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 86.876 86.977 2 1.0589E-14 101001 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 110.86 93.831 50482000 0 0 0 0 2710300 4231800 0 4071300 3636000 7833900 4485900 5428100 1719600 4517000 11848000 27607 3361 25207 232639;232640;232641;232642;232643;232644;232645;232646;232647;232648 184865;184866;184867;184868;184869;184870;184871;184872;184873;184874 184873 10 LATPPAAQESSR Unmodified 1226.6255 0.62551466 5190 Q9Y4B4 RAD54L2 Helicase ARIP4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 25.294 25.531 2 0.048143 25916 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.088 11.625 28977000 0 0 0 0 2200500 2686800 0 4458700 0 3405600 0 5221400 0 3156500 7847900 27608 5190 25208 232649;232650;232651;232652;232653;232654;232655 184875 184875 1 LATQLTGPVMPVR Oxidation (M) 1397.7701 0.77007041 1203 P26373 RPL13 60S ribosomal protein L13 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.121 61.223 2 5.7673E-10 70024 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 117.02 97.261 588880000 0 0 0 25989000 37860000 38182000 45120000 38360000 35853000 52773000 62500000 94467000 54007000 50032000 53736000 27609 1203 25209 232656;232657;232658;232659;232660;232661;232662;232663;232664;232665;232666;232667 184876;184877;184878;184879;184880;184881;184882;184883;184884;184885;184886;184887;184888;184889 184885 1759 14 LATQLTGPVMPVR Unmodified 1381.7752 0.77515579 1203 P26373 RPL13 60S ribosomal protein L13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.701 73.767 2 2.8347E-107 84286 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 239.93 216.17 792470000 0 0 0 32351000 43412000 53806000 40641000 45136000 46205000 70192000 81959000 96873000 62550000 86224000 133120000 27610 1203 25209 232668;232669;232670;232671;232672;232673;232674;232675;232676;232677;232678;232679 184890;184891;184892;184893;184894;184895;184896;184897;184898;184899;184900;184901;184902 184894 13 LATQSNEITIPVTFESR Unmodified 1904.9844 0.98435652 786 P04792 HSPB1 Heat shock protein beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.61 3.63 9 1 23 2 5 3 1 2 2 2 2 2 2 2 2 2 2 2 83.176 82.309 2;3 0 95022 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 331.7 321.16 28705000000 65534000 6691700000 81524000 508630000 682620000 1357700000 1216300000 1348900000 1165200000 2000100000 1865700000 1948200000 1604900000 1998600000 6169100000 27611 786 25210 232680;232681;232682;232683;232684;232685;232686;232687;232688;232689;232690;232691;232692;232693;232694;232695;232696;232697;232698;232699;232700;232701;232702;232703;232704;232705;232706;232707;232708;232709;232710;232711;232712 184903;184904;184905;184906;184907;184908;184909;184910;184911;184912;184913;184914;184915;184916;184917;184918;184919;184920;184921;184922;184923;184924;184925;184926;184927;184928;184929;184930;184931;184932;184933;184934 184915 26 LATQSNEITIPVTFESRAQLGGPEAAK Unmodified 2827.4716 0.47158679 786 P04792 HSPB1 Heat shock protein beta-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 86.195 81.751 3 5.5932E-137 100190 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 133.95 122.18 1394100000 178500000 839870000 375690000 0 0 0 0 0 0 0 0 0 0 0 0 27612 786 25211 232713;232714;232715;232716;232717 184935;184936;184937;184938;184939;184940;184941;184942;184943;184944 184943 10 LATQVIK Unmodified 771.48544 0.48543935 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 28.642 28.841 2 0.034267 31433 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 118.01 30.429 411210000 0 0 0 26559000 37662000 34277000 32117000 41210000 25248000 0 47379000 54719000 47684000 35151000 29204000 27613 3023 25212 232718;232719;232720;232721;232722;232723;232724;232725;232726;232727;232728 184945 184945 0 LATTILQHWK Unmodified 1209.687 0.68699271 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.18 66.265 3 0.002428 75108 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 62.823 52.818 132830000 0 0 0 3593700 2957300 16486000 4793900 8786600 8869000 5697000 6624300 12640000 6380700 13738000 42259000 27614 1986 25213 232729;232730;232731;232732;232733;232734;232735;232736;232737;232738;232739;232740 184946;184947;184948;184949;184950;184951;184952;184953;184954 184952 8 LATVISVWNSDTQNPYHQQALAEK Unmodified 2712.3507 0.35074337 1794 P57678 GEMIN4 Gem-associated protein 4 yes yes 0 0 0 By MS/MS 2 0 1 1 86.4 78.269 3 4.4873E-31 101743 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 92.95 89.852 104000000 104000000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27615 1794 25214 232741 184955 184955 1 LATVRITDSPEEIVQK Unmodified 1797.9836 0.98362824 4884 Q9UGM6 WARS2 Tryptophan--tRNA ligase, mitochondrial yes yes 0 0 1 By MS/MS 2 0 1 1 71.899 68.616 3 0.0024464 84256 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 56.514 38.101 3369600 0 0 3369600 0 0 0 0 0 0 0 0 0 0 0 0 27616 4884 25215 232742 184956 184956 1 LAVADAVIEK Unmodified 1027.5914 0.59136099 4884 Q9UGM6 WARS2 Tryptophan--tRNA ligase, mitochondrial yes yes 0 0 0 By MS/MS 10 0 1 1 56.595 56.695 2 0.019341 65036 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 47.869 21.93 25005000 0 0 0 0 0 0 25005000 0 0 0 0 0 0 0 0 27617 4884 25216 232743 184957 184957 1 LAVADLEK Unmodified 857.48583 0.48583328 1575 P49454 CENPF Centromere protein F yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 48.723 48.309 2 0.033855 61989 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.248 26.166 78143000 0 29386000 0 0 5170100 4925900 6403700 3992400 0 3615900 7706300 0 6543000 4724000 5675700 27618 1575 25217 232744;232745;232746;232747;232748;232749;232750;232751;232752;232753 184958;184959 184959 2 LAVAEVRAENLK Unmodified 1311.751 0.75104953 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.16 3.73 5 2 12 3 2 2 1 1 1 1 1 1 1 1 1 1 1 1 50.293 48.275 2;3 7.32E-53 66855 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 208.6 126.63 1858700000 1481500000 105930000 173610000 5441300 3794800 5924000 10822000 4633100 8073500 9875500 11771000 10170000 5997700 8082800 13007000 27619 965 25218 232754;232755;232756;232757;232758;232759;232760;232761;232762;232763;232764;232765;232766;232767;232768;232769;232770;232771;232772 184960;184961;184962;184963;184964;184965;184966;184967;184968;184969;184970;184971;184972 184967 10 LAVASVTEILK Unmodified 1142.6911 0.69107503 467 O75165 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 0 0 0 By MS/MS 2 0 1 1 88.452 80.321 2 0.044756 104544 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.869 32.327 2907600 2907600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27620 467 25219 232773 184973 184973 1 LAVDDFR Unmodified 834.42357 0.42356738 73 CON__P13646-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 49.743 49.791 2 0.024481 56966 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 97.071 62.179 + 1309900000 0 0 0 39651000 25397000 0 452170000 564160000 0 0 0 89254000 131900000 7367700 0 27621 73 25220 232774;232775;232776;232777;232778;232779;232780 184974;184975;184976;184977 184977 4 LAVDEEENADNNTK Unmodified 1560.6904 0.69035934 762 P02786 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 25.727 25.929 2 1.5856E-117 27594 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 209.85 208.25 282990000 0 0 0 18096000 24733000 26112000 20794000 20548000 19375000 23416000 22200000 40652000 21346000 20785000 24932000 27622 762 25221 232781;232782;232783;232784;232785;232786;232787;232788;232789;232790;232791;232792 184978;184979;184980;184981;184982;184983;184984;184985;184986;184987;184988;184989;184990;184991;184992;184993;184994 184980 17 LAVDTFPAR Unmodified 988.53418 0.53418046 4507 Q9HC52 CBX8 Chromobox protein homolog 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 54.225 54.649 2 0.0074164 62115 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 72.485 47.562 81941000 0 0 0 0 0 0 0 0 0 0 16775000 16079000 12701000 14414000 21973000 27623 4507 25222 232793;232794;232795;232796;232797 184995;184996;184997 184996 3 LAVDTFPARVIK Unmodified 1328.7816 0.78162138 4507 Q9HC52 CBX8 Chromobox protein homolog 8 yes yes 0 0 1 By MS/MS 2 0 1 1 78.709 70.578 3 0.039821 92802 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 39.58 28.345 7875100 7875100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27624 4507 25223 232798 184998 184998 1 LAVEALSSLDGDLAGR Unmodified 1585.8312 0.83115034 967 P12277 CKB Creatine kinase B-type yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 84.48 84.622 2 2.1926E-07 97762 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 111.94 102.16 19891000 0 0 0 0 0 0 0 0 0 0 0 0 0 2331000 17560000 27625 967 25224 232799;232800 184999;185000;185001 185000 3 LAVEALSSLDGDLAGRYYALK Unmodified 2224.1739 0.17394821 967 P12277 CKB Creatine kinase B-type yes yes 0 0 1 By MS/MS 3 0 1 1 92.41 89.185 3 0.0023441 106809 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 42.711 34.111 3598600 0 3598600 0 0 0 0 0 0 0 0 0 0 0 0 0 27626 967 25225 232801 185002 185002 1 LAVEAVLR Unmodified 869.53345 0.53345218 1980 P78371 CCT2 T-complex protein 1 subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.471 63.564 2 0.0050217 72298 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 114.72 22.254 688530000 0 0 0 22261000 41943000 55762000 58279000 34911000 32434000 79636000 73879000 62429000 53903000 71311000 101780000 27627 1980 25226 232802;232803;232804;232805;232806;232807;232808;232809;232810;232811;232812;232813 185003;185004;185005;185006;185007;185008;185009;185010;185011;185012;185013;185014;185015;185016;185017;185018;185019;185020;185021;185022;185023;185024;185025;185026;185027;185028;185029 185015 27 LAVEETK Unmodified 788.42798 0.42798405 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 16.169 15.793 2 0.01917 15652 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 110.61 50.971 6240300000 0 736920000 4784800 0 7014100 12095000 321060000 339440000 282200000 1033400000 1541700000 1946800000 0 0 14888000 27628 4226 25227 232814;232815;232816;232817;232818;232819;232820;232821;232822;232823;232824 185030;185031;185032;185033;185034;185035;185036;185037;185038;185039;185040;185041;185042;185043 185031 12 LAVEILNK Unmodified 898.54877 0.54876789 1091 P19525 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.922 61.026 2 0.011813 69654 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 114.78 47.748 184700000 0 0 0 10083000 10992000 14428000 13429000 17259000 9309900 17518000 18152000 18715000 14388000 14636000 25793000 27629 1091 25228 232825;232826;232827;232828;232829;232830;232831;232832;232833;232834;232835;232836 185044;185045;185046;185047;185048;185049;185050;185051;185052;185053;185054 185045 9 LAVFGDLGADNPK Unmodified 1315.6772 0.67721588 3003 Q6ZNF0 PAPL Iron/zinc purple acid phosphatase-like protein yes yes 0 0 0 By MS/MS 10 0 1 1 75.834 75.313 2 0.00833 87393 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 74.962 56.737 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27630 3003 25229 232837 185055 185055 1 LAVGDNNSK Unmodified 916.46141 0.46140945 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 11.551 10.847 2 3.1717E-06 12244 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 169.06 130.24 1946800000 76867000 1249600000 6747100 54887000 36203000 75756000 51964000 44613000 42069000 55004000 50218000 47223000 46060000 41447000 68103000 27631 1518 25230 232838;232839;232840;232841;232842;232843;232844;232845;232846;232847;232848;232849;232850;232851;232852;232853 185056;185057;185058;185059;185060;185061;185062;185063;185064;185065;185066;185067;185068;185069;185070;185071;185072 185064 15 LAVHPSGVALQDR Unmodified 1361.7415 0.74154747 801 P05161 ISG15 Ubiquitin-like protein ISG15 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 45.504 45.834 3 0.0022534 51728 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 41.621 33.316 57097000 0 0 0 0 0 9549100 4211800 3306500 0 5472900 6318600 5601700 4285500 5612900 12738000 27632 801 25231 232854;232855;232856;232857;232858;232859;232860;232861;232862 185073;185074 185073 2 LAVIQEAR Unmodified 898.52362 0.52361577 2051 Q01167 FOXK2 Forkhead box protein K2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 38.209 38.347 2 0.01524 42231 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 69.198 34.305 175140000 0 0 0 15755000 13453000 0 20710000 12578000 12287000 14738000 19781000 0 21023000 20309000 24510000 27633 2051 25232 232863;232864;232865;232866;232867;232868;232869;232870;232871;232872 185075;185076;185077;185078;185079;185080 185080 3 LAVLDETTEK Unmodified 1117.5867 0.58666954 5326 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 2 4 3 1 1 1 2 2 54.086 54.009 2 0.0013167 79047 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 107.66 77.479 + 412110000 0 0 0 21217000 36650000 41248000 2550500 0 1814500 42480000 106590000 159560000 0 0 0 27634 5326 25233 232873;232874;232875;232876;232877;232878;232879;232880;232881;232882;232883;232884;232885;232886;232887;232888 185081;185082;185083;185084;185085;185086;185087;185088;185089;185090;185091;185092 185086 6 LAVLDPALSPQR Unmodified 1278.7296 0.7295858 34 A7E2V4 ZSWIM8 Zinc finger SWIM domain-containing protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 73.168 73.219 2 0.0018775 84189 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 77.379 59.515 146260000 0 0 0 6282000 12698000 13665000 10818000 13518000 0 0 16901000 18767000 18742000 15440000 19426000 27635 34 25234 232889;232890;232891;232892;232893;232894;232895;232896;232897;232898 185093;185094;185095;185096;185097;185098;185099;185100;185101;185102;185103 185097 10 LAVLDWNQR Unmodified 1113.5931 0.59309232 3831 Q96F10 SAT2 Diamine acetyltransferase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 74.251 74.222 2 0.0035332 85566 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 89.752 80.538 999070000 0 0 0 82168000 138960000 141470000 1117100 0 0 186660000 189450000 259250000 0 0 0 27636 3831 25235 232899;232900;232901;232902;232903;232904;232905 185104;185105;185106;185107;185108;185109 185104 6 LAVLPYELR Unmodified 1072.6281 0.62808085 5010 Q9ULX3 NOB1 RNA-binding protein NOB1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.942 79 2 0.0079891 91736 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 70.919 52.136 83900000 0 0 0 4219600 4342500 6354200 5742600 3777400 5559600 8261100 9142900 10072000 8033900 7831800 10562000 27637 5010 25236 232906;232907;232908;232909;232910;232911;232912;232913;232914;232915;232916;232917 185110;185111;185112;185113;185114;185115;185116;185117;185118;185119 185118 10 LAVNFGVSK Unmodified 933.52837 0.5283668 3295 Q8IZH2 XRN1 5'-3' exoribonuclease 1 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 58.988 59.263 2 0.03575 67449 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 45.972 12.457 6843600 0 0 0 0 0 0 0 0 3414800 0 3428800 0 0 0 0 27638 3295 25237 232918;232919 185120 185120 1 LAVNMVPFPR Oxidation (M) 1158.6219 0.62194961 1963;842;4160;2350;4182;2306;2678;47 P07437;A6NNZ2;P68371;Q13509;Q13885;Q9BVA1;Q3ZCM7;Q9BUF5;CON__ENSEMBL:ENSBTAP00000025008;Q9H4B7 TUBB;TUBB4B;TUBB3;TUBB2A;TUBB2B;TUBB8;TUBB6;TUBB1 Tubulin beta chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-4B chain;Tubulin beta-3 chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-8 chain;Tubulin beta-6 chain;Tubulin beta-1 chain no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 111 7 8 7 7 10 8 12 10 11 12 9 10 76.367 76.445 2;3 2.2731E-11 84080 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 159.2 159.2 + 51551000000 0 0 0 2615400000 3237700000 4216600000 3812100000 3653900000 3146800000 4876700000 5402000000 6048800000 5187900000 3885900000 5467400000 27639 842;1963;2306;2350;4182;2678;4160;47 25238 232920;232921;232922;232923;232924;232925;232926;232927;232928;232929;232930;232931;232932;232933;232934;232935;232936;232937;232938;232939;232940;232941;232942;232943;232944;232945;232946;232947;232948;232949;232950;232951;232952;232953;232954;232955;232956;232957;232958;232959;232960;232961;232962;232963;232964;232965;232966;232967;232968;232969;232970;232971;232972;232973;232974;232975;232976;232977;232978;232979;232980;232981;232982;232983;232984;232985;232986;232987;232988;232989;232990;232991;232992;232993;232994;232995;232996;232997;232998;232999;233000;233001;233002;233003;233004;233005;233006;233007;233008;233009;233010;233011;233012;233013;233014;233015;233016;233017;233018;233019;233020;233021;233022;233023;233024;233025;233026;233027;233028;233029;233030 185121;185122;185123;185124;185125;185126;185127;185128;185129;185130;185131;185132;185133;185134;185135;185136;185137;185138;185139;185140;185141;185142;185143;185144;185145;185146;185147;185148;185149;185150;185151;185152;185153;185154;185155;185156;185157;185158;185159;185160;185161;185162;185163;185164;185165;185166;185167;185168;185169;185170;185171;185172;185173;185174;185175;185176;185177;185178;185179;185180;185181;185182;185183;185184;185185;185186;185187;185188;185189;185190;185191;185192;185193;185194;185195;185196;185197;185198;185199;185200;185201;185202;185203;185204;185205;185206;185207;185208;185209;185210;185211;185212;185213;185214;185215;185216;185217;185218;185219;185220 185121 40 82 LAVNMVPFPR Unmodified 1142.627 0.62703499 1963;842;4160;2350;4182;2306;2678;47 P07437;A6NNZ2;P68371;Q13509;Q13885;Q9BVA1;Q3ZCM7;Q9BUF5;CON__ENSEMBL:ENSBTAP00000025008;Q9H4B7 TUBB;TUBB4B;TUBB3;TUBB2A;TUBB2B;TUBB8;TUBB6;TUBB1 Tubulin beta chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-4B chain;Tubulin beta-3 chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-8 chain;Tubulin beta-6 chain;Tubulin beta-1 chain no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 81.411 81.472 2;3 4.622E-84 94097 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 208.67 189.69 + 25382000000 0 0 0 806000000 1139000000 1792000000 1094800000 2116500000 1157100000 2622700000 2712100000 2931700000 1788300000 2086800000 5134900000 27640 842;1963;2306;2350;4182;2678;4160;47 25238 233031;233032;233033;233034;233035;233036;233037;233038;233039;233040;233041;233042;233043;233044;233045;233046;233047;233048;233049;233050;233051;233052;233053;233054 185221;185222;185223;185224;185225;185226;185227;185228;185229;185230;185231;185232;185233;185234;185235;185236;185237;185238;185239;185240;185241;185242;185243 185221 20 LAVNNIAGIEEVNMIK Unmodified 1726.9288 0.9287559 3900 Q96K17 BTF3L4 Transcription factor BTF3 homolog 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.2 3.82 3 2 5 1 3 1 1 1 1 1 1 86.76 84.647 2;3 6.9791E-31 105560 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 159.99 145.31 1158100000 17697000 1088400000 10527000 0 0 0 0 0 0 6420500 6850200 6271100 0 4040300 17935000 27641 3900 25239 233055;233056;233057;233058;233059;233060;233061;233062;233063;233064 185244;185245;185246;185247;185248;185249;185250;185251;185252;185253;185254 185245 11 LAVNNIAGIEEVNMIK Oxidation (M) 1742.9237 0.92367052 3900 Q96K17 BTF3L4 Transcription factor BTF3 homolog 4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.67 3.89 4 1 4 1 3 1 1 1 1 1 82.514 79.994 2 1.5799E-31 99211 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 132.03 125.28 903550000 9892900 804580000 13594000 0 0 0 7634000 13231000 0 27528000 27094000 0 0 0 0 27642 3900 25239 233065;233066;233067;233068;233069;233070;233071;233072;233073 185255;185256;185257;185258;185259;185260;185261;185262;185263;185264 185257 5404 7 LAVQNSSLHDIQHAPK Unmodified 1756.922 0.92203104 238 O14981 BTAF1 TATA-binding protein-associated factor 172 yes yes 0 0 0 By MS/MS By MS/MS 2 0 4 2 2 48.912 43.005 3;4 8.5081E-05 59238 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.37 71.896 353300000 307530000 0 45770000 0 0 0 0 0 0 0 0 0 0 0 0 27643 238 25240 233074;233075;233076;233077 185265;185266;185267;185268;185269 185266 3 LAVQQVEEAQQLR Unmodified 1510.8104 0.81035532 158 O00461 GOLIM4 Golgi integral membrane protein 4 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 61.252 61.493 2 3.0565E-13 70176 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 137.95 126.74 54613000 0 0 0 0 0 4341000 4741900 5815000 3356300 5432900 5846700 7192900 4804200 3743600 9338700 27644 158 25241 233078;233079;233080;233081;233082;233083;233084;233085;233086;233087;233088 185270;185271;185272;185273;185274;185275;185276;185277;185278;185279 185274 10 LAVTNQK Unmodified 772.4443 0.44430282 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.5 3.55 1 1 4 2 1 1 1 1 11.429 10.383 2 0.025846 9259 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 79.939 35.408 170350000 0 161610000 0 0 0 2477100 853590 0 0 1960900 0 3443900 0 0 0 27645 645 25242 233089;233090;233091;233092;233093;233094 185280;185281 185281 1 LAVTSYADIADLMDCGNK Unmodified 1955.8969 0.89686342 378 O43896 KIF1C Kinesin-like protein KIF1C yes yes 0 0 0 By MS/MS 2 0 1 1 94.127 89.231 2 0.00010471 110752 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.651 86.819 23552000 0 23552000 0 0 0 0 0 0 0 0 0 0 0 0 0 27646 378 25243 233095 185282 185282 1 LAVTSYTDIADLMDAGNK Unmodified 1896.9139 0.91389369 396 O60333 KIF1B Kinesin-like protein KIF1B yes yes 0 0 0 By MS/MS 2 0 1 1 94.415 89.519 2 0.00011428 111044 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.631 81.725 36609000 0 36609000 0 0 0 0 0 0 0 0 0 0 0 0 0 27647 396 25244 233096 185283 185283 1 LAVVDPLFGMQPIR Oxidation (M) 1570.8541 0.85413439 864 P08243 ASNS Asparagine synthetase [glutamine-hydrolyzing] yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 86.557 86.625 2 1.1257E-09 100376 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 98.048 88.393 116190000 0 0 0 2509100 3692800 12251000 3945500 5848400 5201900 14208000 11996000 12919000 7081100 10020000 26517000 27648 864 25245 233097;233098;233099;233100;233101;233102;233103;233104;233105;233106;233107;233108 185284;185285;185286;185287;185288;185289;185290;185291;185292;185293;185294;185295;185296;185297 185285 1106 14 LAVVDPLFGMQPIR Unmodified 1554.8592 0.85921977 864 P08243 ASNS Asparagine synthetase [glutamine-hydrolyzing] yes yes 0 0 0 By MS/MS 10 0 1 1 92.695 92.833 2 0.00044052 107526 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.162 64.209 2931600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2931600 27649 864 25245 233109 185298 185298 1 LAVYCLK Unmodified 865.47316 0.47316011 1234 P28340 POLD1 DNA polymerase delta catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 52.816 52.966 2 0.046463 59994 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 65.897 41.541 186560000 0 0 0 5297400 5541800 26951000 0 5080200 8419600 10435000 26005000 31555000 27882000 14425000 24967000 27650 1234 25246 233110;233111;233112;233113;233114;233115;233116;233117;233118;233119;233120 185299 185299 1 LAVYIDR Unmodified 848.4756 0.47560295 757 P02545 LMNA Prelamin-A/C;Lamin-A/C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.259 49.418 2 0.023929 55675 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 94.407 37.305 525290000 0 0 0 46332000 27160000 34555000 27951000 30222000 30593000 43409000 48969000 66985000 33308000 50862000 84941000 27651 757 25247 233121;233122;233123;233124;233125;233126;233127;233128;233129;233130;233131;233132 185300;185301;185302;185303 185302 4 LAWTLTANQPSSQATTSK Unmodified 1903.964 0.96395543 3787 Q96CW5 TUBGCP3 Gamma-tubulin complex component 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.14 69.217 2 4.1404E-26 78841 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 106.32 77.559 62472000 0 0 0 3410600 3245700 4443300 4270000 3375500 3324000 4901700 6022600 8063200 5177800 5074500 11163000 27652 3787 25248 233133;233134;233135;233136;233137;233138;233139;233140;233141;233142;233143;233144 185304;185305;185306;185307;185308;185309;185310;185311;185312;185313;185314;185315;185316 185307 13 LAYELYTEALGIDPNNIK Unmodified 2036.0466 0.046622427 4035 Q99615 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 6 4 2 2 1 1 1 1 92.793 91.017 2;3 0.0006999 105696 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.55 49.674 90084000 0 79741000 3935600 0 0 0 0 0 0 2609900 0 0 0 0 3797400 27653 4035 25249 233145;233146;233147;233148 185317;185318;185319;185320 185319 4 LAYFNDIAVGAVCCR Unmodified 1727.8123 0.81234593 4310 Q9GZZ1 NAA50 N-alpha-acetyltransferase 50 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 82.626 82.666 2 4.8455E-28 95803 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 140.3 114.86 83478000 0 0 0 1331500 5153900 5644500 2110200 5443700 9826700 11849000 16150000 25969000 0 0 0 27654 4310 25250 233149;233150;233151;233152;233153;233154;233155;233156;233157 185321;185322;185323;185324;185325;185326;185327;185328;185329;185330 185326 10 LAYHPLK Unmodified 840.48577 0.48577371 4003 Q96TA1 FAM129B Niban-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 26.296 26.453 2 0.049222 28286 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 64.276 27.719 37573000 0 0 0 1991700 0 8262500 4671800 3179900 2395800 4935800 4817400 0 3802200 3516300 0 27655 4003 25251 233158;233159;233160;233161;233162;233163;233164;233165;233166 185331 185331 1 LAYIAHPK Unmodified 911.52289 0.52288749 1529 P47914 RPL29 60S ribosomal protein L29 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 25.484 25.746 2 0.020541 27210 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 62.714 32.211 84894000 0 0 0 0 7291200 0 9344000 0 7395300 9142800 9143600 11608000 0 11394000 19574000 27656 1529 25252 233167;233168;233169;233170;233171;233172;233173;233174 185332;185333;185334 185333 2 LAYINPDLALEEK Unmodified 1487.7872 0.78716026 1313 P31948 STIP1 Stress-induced-phosphoprotein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.999 80.058 2 2.4288E-07 92111 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 120.04 106.68 1088800000 0 0 0 17779000 21366000 24968000 37895000 32547000 23210000 46996000 149070000 157110000 37471000 138460000 401960000 27657 1313 25253 233175;233176;233177;233178;233179;233180;233181;233182;233183;233184;233185;233186 185335;185336;185337;185338;185339;185340;185341;185342;185343;185344;185345;185346 185338 12 LAYLPTAPQPFSSR Unmodified 1546.8144 0.81437807 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.767 79.826 2 1.3003E-07 91917 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.636 60.142 215660000 0 0 0 8666300 11098000 13307000 12691000 18031000 12654000 21602000 16912000 28172000 14386000 19871000 38268000 27658 5262 25254 233187;233188;233189;233190;233191;233192;233193;233194;233195;233196;233197;233198 185347;185348;185349;185350;185351;185352;185353;185354;185355;185356;185357;185358;185359;185360 185351 14 LAYLQILSEETSVK Unmodified 1592.8661 0.86613887 1091 P19525 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 4 10 2 1 1 1 1 1 1 1 1 1 1 1 1 89.292 87.683 2 2.5168E-05 101724 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 108.7 99.264 95823000 48217000 20806000 4133700 0 922650 1345500 1098100 1202600 860250 3312600 3544100 2686800 0 1549800 6143900 27659 1091 25255 233199;233200;233201;233202;233203;233204;233205;233206;233207;233208;233209;233210;233211;233212 185361;185362;185363;185364;185365;185366;185367;185368;185369;185370;185371 185364 10 LAYNEEQIHK Unmodified 1243.6197 0.619701 4897 Q9UHD2 TBK1 Serine/threonine-protein kinase TBK1 yes yes 0 0 0 By MS/MS 10 0 1 1 28.468 28.472 3 0.04733 30899 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 24.511 8.8813 4860400 0 0 0 0 0 4860400 0 0 0 0 0 0 0 0 0 27660 4897 25256 233213 185372 185372 1 LAYNENDNTYYAMK Oxidation (M) 1724.7352 0.73520105 3973 Q96RR4 CAMKK2 Calcium/calmodulin-dependent protein kinase kinase 2 yes yes 0 1 0 By MS/MS 2 0 1 1 47.534 41.971 2 0.0085908 54701 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 56.094 46.906 8419500 0 8419500 0 0 0 0 0 0 0 0 0 0 0 0 0 27661 3973 25257 233214 185373 185373 5457 1 LAYNENDNTYYAMK Unmodified 1708.7403 0.74028643 3973 Q96RR4 CAMKK2 Calcium/calmodulin-dependent protein kinase kinase 2 yes yes 0 0 0 By MS/MS 2 0 1 1 59.417 53.574 2 0.0017579 68963 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.79 88.541 9651500 0 9651500 0 0 0 0 0 0 0 0 0 0 0 0 0 27662 3973 25257 233215 185374 185374 1 LAYPETKPEVR Unmodified 1301.698 0.69795133 2525 Q15386 UBE3C Ubiquitin-protein ligase E3C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.878 38.059 3 0.0049017 41526 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 45.077 37.669 78579000 0 0 0 3937300 4708500 5918400 6083300 6151800 4689400 8191600 7531100 10319000 5607500 5145700 10296000 27663 2525 25258 233216;233217;233218;233219;233220;233221;233222;233223;233224;233225;233226;233227 185375;185376;185377;185378;185379 185379 5 LAYQELQIDR Unmodified 1247.651 0.65100113 3358 Q8N6H7 ARFGAP2 ADP-ribosylation factor GTPase-activating protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.642 63.733 2 1.0887E-09 72838 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 158.76 118.75 400980000 0 0 0 21667000 23550000 27104000 28762000 26164000 25361000 42892000 42609000 41879000 31006000 29462000 60526000 27664 3358 25259 233228;233229;233230;233231;233232;233233;233234;233235;233236;233237;233238;233239 185380;185381;185382;185383;185384;185385;185386;185387 185387 1 LAYQELQIDRK Unmodified 1375.746 0.74596415 3358 Q8N6H7 ARFGAP2 ADP-ribosylation factor GTPase-activating protein 2 yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 52.276 52.371 3 0.00010241 59156 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 89.403 75.374 129780000 0 0 0 6086200 5579900 15641000 11873000 6106700 14602000 12476000 12747000 0 11689000 10611000 22365000 27665 3358 25260 233240;233241;233242;233243;233244;233245;233246;233247;233248;233249;233250 185388;185389;185390;185391;185392;185393 185392 5 LAYQESEVAALLK Unmodified 1433.7766 0.77659558 34 A7E2V4 ZSWIM8 Zinc finger SWIM domain-containing protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 82.293 82.397 2 5.1593E-08 95025 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 125.75 98.493 89527000 0 0 0 0 4504600 5691300 3954200 8611800 7879200 9470800 8268400 11717000 8007000 8602600 12820000 27666 34 25261 233251;233252;233253;233254;233255;233256;233257;233258;233259;233260;233261 185394;185395;185396;185397;185398;185399;185400;185401;185402;185403 185396 10 LAYQVLAEK Unmodified 1033.5808 0.5807963 4079 Q9BPX3 NCAPG Condensin complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 56.092 54.48 2 0.0047986 61270 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 85.666 45.568 662790000 152560000 283360000 62849000 9170400 9169700 14891000 11894000 13433000 9130500 17013000 14097000 18269000 14529000 11657000 20769000 27667 4079 25262 233262;233263;233264;233265;233266;233267;233268;233269;233270;233271;233272;233273;233274;233275;233276;233277;233278 185404;185405;185406;185407;185408;185409;185410;185411;185412;185413;185414;185415;185416;185417 185415 13 LAYSGSESGADGRK Unmodified 1396.6583 0.65827136 2887 Q6ICG6 KIAA0930 Uncharacterized protein KIAA0930 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 15.259 14.784 3 0.00053136 13960 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 43.813 34.618 72782000 0 13138000 0 3470000 3449500 4467200 4837800 0 3741200 6582100 9583700 0 5095200 4141400 14276000 27668 2887 25263 233279;233280;233281;233282;233283;233284;233285;233286;233287;233288;233289;233290 185418;185419;185420;185421;185422;185423;185424;185425;185426;185427;185428 185424 10 LAYSSQTAQQK Unmodified 1223.6146 0.61461563 4350 Q9H1H9 KIF13A Kinesin-like protein KIF13A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.192 18.38 2 0.013991 18780 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 46.001 28.016 34980000 0 0 0 1482100 2285400 3538400 2453000 1651800 1219000 4668500 3711200 3000500 3026300 2994800 4948800 27669 4350 25264 233291;233292;233293;233294;233295;233296;233297;233298;233299;233300;233301;233302 185429;185430;185431;185432;185433 185431 5 LAYTLLNK Unmodified 934.54877 0.54876789 4808;2435 Q9P265;Q14689 DIP2B;DIP2A Disco-interacting protein 2 homolog B;Disco-interacting protein 2 homolog A no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60.216 59.016 2 0.03731 67206 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.43 17.617 73886000 18232000 11751000 2452100 3305500 2336300 4240500 3053300 2438100 2128100 3653500 3903300 5381300 2840200 0 8171800 27670 4808;2435 25265 233303;233304;233305;233306;233307;233308;233309;233310;233311;233312;233313;233314;233315;233316 185434;185435;185436;185437;185438 185434 5 LAYVAAGDLAPINAFIGGLAAQEVMK Oxidation (M) 2618.3778 0.37780975 1137 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 1 0 By MS/MS 2 0 1 1 101.65 96.936 3 2.8667E-05 119762 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 47.745 40.385 21518000 0 21518000 0 0 0 0 0 0 0 0 0 0 0 0 0 27671 1137 25266 233317 185439 185439 1633 1 LAYVAAGDLAPINAFIGGLAAQEVMK Unmodified 2602.3829 0.38289512 1137 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 By MS/MS 2 0 1 1 102.72 98.005 3 1.6564E-56 121111 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.08 82.681 21584000 0 21584000 0 0 0 0 0 0 0 0 0 0 0 0 0 27672 1137 25266 233318 185440;185441 185441 2 LAYVAPTIPR Unmodified 1099.639 0.63897988 232 O14974 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 67.912 67.94 2 0.002754 78404 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 80.438 62.926 178960000 0 0 0 15251000 18805000 23040000 18259000 0 18463000 0 24163000 0 19344000 16796000 24839000 27673 232 25267 233319;233320;233321;233322;233323;233324;233325;233326;233327 185442;185443;185444;185445;185446 185446 5 LAYYSTVQHK Unmodified 1208.619 0.61897272 4666 Q9NVE7 PANK4 Pantothenate kinase 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 8 3.46 4 12 2 2 2 2 2 1 1 2 1 1 31.715 30.502 2;3 4.9664E-10 33511 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 157.86 129.98 1206300000 109540000 0 31171000 200330000 390390000 393450000 3944700 23594000 19973000 0 10497000 23438000 0 0 0 27674 4666 25268 233328;233329;233330;233331;233332;233333;233334;233335;233336;233337;233338;233339;233340;233341;233342;233343 185447;185448;185449;185450;185451;185452;185453;185454 185454 4 LAYYYQR Unmodified 975.48142 0.48141661 1826 P61011 SRP54 Signal recognition particle 54 kDa protein yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.532 39.711 2 0.017078 43967 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 114.67 75.449 648420000 0 0 0 31524000 47374000 42058000 46652000 54374000 42101000 60680000 61308000 77648000 65242000 43217000 76239000 27675 1826 25269 233344;233345;233346;233347;233348;233349;233350;233351;233352;233353;233354;233355 185455;185456;185457;185458;185459;185460;185461;185462 185456 8 LCAEDVK Unmodified 833.3953 0.39530372 4683 Q9NVU0 POLR3E DNA-directed RNA polymerase III subunit RPC5 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 19.963 16.29 2 0.045032 21219 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.616 20.37 87076000 0 87076000 0 0 0 0 0 0 0 0 0 0 0 0 0 27676 4683 25270 233356;233357 185463 185463 1 LCALYGK Unmodified 823.42621 0.42620992 4235 Q9BXW6 OSBPL1A Oxysterol-binding protein-related protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 37.655 32.74 2 0.047411 42790 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.72 47.878 21176000 0 21176000 0 0 0 0 0 0 0 0 0 0 0 0 0 27677 4235 25271 233358 185464 185464 1 LCDEQLSSQSHYDFGLR Unmodified 2053.9164 0.91635331 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 68.463 68.598 3 0.00040619 78725 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 56.215 53.471 51744000 0 0 0 0 2682900 0 0 6658700 5704200 7169200 7722800 0 4326600 4837100 12643000 27678 2392 25272 233359;233360;233361;233362;233363;233364;233365;233366;233367 185465;185466;185467;185468;185469;185470;185471;185472 185466 8 LCDFGFAK Unmodified 956.44259 0.44258826 3234 Q8IW41 MAPKAPK5 MAP kinase-activated protein kinase 5 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.272 58.387 2 0.011082 65517 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.741 0 99328000 0 0 0 5171900 3678400 9188000 5264100 3711300 5094400 8661200 10699000 10962000 12017000 12070000 12811000 27679 3234 25273 233368;233369;233370;233371;233372;233373;233374;233375;233376;233377;233378;233379 185473 185473 1 LCDFGISGQLVDSIAK Unmodified 1721.8658 0.86582129 1491 P45985 MAP2K4 Dual specificity mitogen-activated protein kinase kinase 4 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 91.766 88.074 2 0.00025923 109335 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.629 65.643 40002000 0 39170000 832450 0 0 0 0 0 0 0 0 0 0 0 0 27680 1491 25274 233380;233381 185474 185474 1 LCDFGISGR Unmodified 1023.4808 0.48076468 206 O14733 MAP2K7 Dual specificity mitogen-activated protein kinase kinase 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 4 2 1 1 52.757 53.037 2 0.014892 60227 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 57.859 16.206 21431000 0 0 0 0 0 0 0 0 0 0 0 0 21431000 0 0 27681 206 25275 233382;233383;233384;233385 185475;185476;185477;185478;185479 185476 5 LCDFGSAK Unmodified 896.4062 0.40620276 1605;1604 P49840;P49841 GSK3A;GSK3B Glycogen synthase kinase-3 alpha;Glycogen synthase kinase-3 beta no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 8 3.46 3 9 1 1 1 1 1 1 1 1 1 1 1 1 26.536 25.629 2 0.0088146 26210 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.916 47.756 555380000 15512000 449390000 4600100 5442700 0 7687600 4068400 0 6164200 11775000 11296000 13477000 13399000 0 12562000 27682 1604;1605 25276 233386;233387;233388;233389;233390;233391;233392;233393;233394;233395;233396;233397 185480;185481;185482;185483;185484;185485;185486 185482 7 LCDFNPK Unmodified 892.41129 0.41128813 885 P09496 CLTA Clathrin light chain A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 31.497 30.818 2 0.020191 39311 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.08 94.418 838230000 0 431240000 7090500 0 30526000 32283000 33014000 0 25477000 29694000 0 125590000 35267000 88046000 0 27683 885 25277 233398;233399;233400;233401;233402;233403;233404;233405;233406;233407 185487;185488;185489;185490;185491 185488 5 LCDGINK Unmodified 818.39564 0.39563807 651 O95379 TNFAIP8 Tumor necrosis factor alpha-induced protein 8 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 18.769 14.738 2 0.035362 19114 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.359 32.128 126300000 6971300 119330000 0 0 0 0 0 0 0 0 0 0 0 0 0 27684 651 25278 233408;233409 185492 185492 1 LCDLEIMPSSEAADGEK Unmodified 1863.823 0.82302978 3780 Q96CN9 GCC1 GRIP and coiled-coil domain-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 75.32 70.379 2 5.0177E-47 88134 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 169.62 137.56 33555000 0 33555000 0 0 0 0 0 0 0 0 0 0 0 0 0 27685 3780 25279 233410 185493 185493 1 LCDLERANQTLK Unmodified 1459.7453 0.74531222 2849 Q676U5 ATG16L1 Autophagy-related protein 16-1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 43.408 38.964 3 0.02232 48784 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 46.592 16.657 55069000 0 22451000 32619000 0 0 0 0 0 0 0 0 0 0 0 0 27686 2849 25280 233411;233412 185494 185494 1 LCDPHPSK Unmodified 952.44365 0.44365089 2112 Q05086 UBE3A Ubiquitin-protein ligase E3A yes yes 0 0 0 By MS/MS 2 0 1 1 10.473 7.2079 2 0.042482 10112 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.628 46.892 14840000 0 14840000 0 0 0 0 0 0 0 0 0 0 0 0 0 27687 2112 25281 233413 185495 185495 1 LCDSGELVAIK Unmodified 1203.6169 0.61692381 1605 P49841 GSK3B Glycogen synthase kinase-3 beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 58.64 58.569 2 0.013397 65651 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 54.608 30.758 57037000 0 0 0 7352200 8066400 11801000 8130000 0 0 9274600 0 0 1887200 10525000 0 27688 1605 25282 233414;233415;233416;233417;233418;233419;233420 185496;185497 185497 2 LCDSYEIRPGK Unmodified 1336.6445 0.64453555 322 O43390 HNRNPR Heterogeneous nuclear ribonucleoprotein R yes yes 0 0 1 By MS/MS By MS/MS 2.2 0.4 4 1 3 2 41.743 37.293 2;3 0.002774 46862 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 105.4 74.093 259920000 0 129450000 130460000 0 0 0 0 0 0 0 0 0 0 0 0 27689 322 25283 233421;233422;233423;233424;233425 185498;185499;185500;185501;185502 185501 4 LCEACPMHSLHK Unmodified 1481.6578 0.65775954 398 O60343 TBC1D4 TBC1 domain family member 4 yes yes 0 0 0 By MS/MS 2 0 1 1 39.053 32.491 3 6.9936E-05 45099 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.911 73.71 16958000 16958000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27690 398 25284 233426 185503 185503 1 LCEEEAVIADK Unmodified 1275.6017 0.60166768 2086 Q03001 DST Dystonin yes yes 0 0 0 By MS/MS 2 0 1 1 47.968 42.405 2 0.0090936 55207 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.652 47.77 21004000 0 21004000 0 0 0 0 0 0 0 0 0 0 0 0 0 27691 2086 25285 233427 185504 185504 1 LCEELQATLDGLTK Unmodified 1589.7971 0.79707302 4202 Q9BW66 CINP Cyclin-dependent kinase 2-interacting protein yes yes 0 0 0 By MS/MS 2 0 1 1 87.971 83.129 3 0.0045734 103362 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 50.843 41.043 9442800 0 9442800 0 0 0 0 0 0 0 0 0 0 0 0 0 27692 4202 25286 233428 185505 185505 1 LCEGFNEVLK Unmodified 1207.5907 0.59070906 5283 Q9Y6H1 CHCHD2 Coiled-coil-helix-coiled-coil-helix domain-containing protein 2 yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 69.936 65.187 2 0.0086877 83025 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.52 94.342 250750000 0 248070000 2686200 0 0 0 0 0 0 0 0 0 0 0 0 27693 5283 25287 233429;233430 185506 185506 0 LCEGTPQEGGLR Unmodified 1315.619 0.61904908 3226 Q8IVF2 AHNAK2 Protein AHNAK2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 32.598 32.85 2 2.4923E-05 34861 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.111 51.131 48865000 0 0 0 0 5190700 4111300 0 5008800 3359100 4036600 7820000 6108700 6940200 0 6290100 27694 3226 25288 233431;233432;233433;233434;233435;233436;233437;233438;233439;233440;233441 185507;185508;185509;185510;185511;185512;185513;185514;185515;185516 185509 10 LCELQPEEK Unmodified 1144.5434 0.54342452 1556 P49005 POLD2 DNA polymerase delta subunit 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 31.683 31.169 2 0.0037422 33926 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 101.25 76.733 78824000 0 47582000 1138700 0 0 0 1802500 1687600 2789800 0 4526800 6875400 4152400 3367700 4900400 27695 1556 25289 233442;233443;233444;233445;233446;233447;233448;233449;233450;233451;233452 185517;185518;185519;185520;185521;185522;185523 185523 7 LCEQGINPEALSSVIK Unmodified 1756.9029 0.90293508 2166 Q08AG7 MZT1 Mitotic-spindle organizing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 83.709 83.818 2 0.00027462 97395 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 68.676 59.354 19151000 0 0 0 0 0 0 0 0 0 0 0 9902500 3902200 5345800 0 27696 2166 25290 233453;233454;233455 185524;185525;185526 185525 3 LCESEEAGVIETIK Unmodified 1576.7654 0.76543854 3341 Q8N584 TTC39C Tetratricopeptide repeat protein 39C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.4 3.68 4 1 10 2 2 1 1 1 1 1 1 1 1 1 1 1 67.93 66.543 2 4.9797E-15 83921 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.45 95.067 158290000 0 128890000 2111800 0 0 5140200 1888100 0 0 5229500 4070100 4928700 0 0 6032200 27697 3341 25291 233456;233457;233458;233459;233460;233461;233462;233463;233464;233465;233466;233467;233468;233469;233470 185527;185528;185529;185530;185531;185532;185533;185534;185535;185536;185537;185538;185539;185540 185530 14 LCESNRVDAK Unmodified 1190.5714 0.5713706 4895 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 9.6222 9.7547 2;3 0.014424 6513 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 128.86 97.554 568170000 0 0 0 28760000 29700000 30609000 42739000 35959000 28375000 42407000 83575000 77245000 60443000 44880000 63475000 27698 4895 25292 233471;233472;233473;233474;233475;233476;233477;233478;233479;233480;233481;233482;233483;233484;233485;233486;233487;233488;233489;233490;233491;233492;233493;233494 185541;185542;185543;185544;185545;185546;185547;185548;185549;185550;185551;185552;185553 185546 5 LCFDNSFSTISEK Unmodified 1546.6974 0.69735898 2293 Q13445 TMED1 Transmembrane emp24 domain-containing protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.24 2 1 10 2 1 1 1 1 1 1 1 1 1 1 1 75.796 75.004 2 0.00045173 86216 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.693 64.064 169520000 0 101620000 741570 2385100 3440400 0 3843700 6180300 0 7901500 8904800 13255000 5977600 5098900 10171000 27699 2293 25293 233495;233496;233497;233498;233499;233500;233501;233502;233503;233504;233505;233506;233507 185554;185555;185556;185557;185558;185559;185560;185561;185562 185556 9 LCFSTAQHAS Unmodified 1120.4971 0.49714303 1008 P14866 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 38.15 37.026 2 4.9415E-06 50064 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 145.63 126.27 2206700000 830180000 1012300000 23972000 16358000 10858000 24042000 17546000 18478000 21521000 30006000 41377000 38587000 39207000 32318000 49930000 27700 1008 25294 233508;233509;233510;233511;233512;233513;233514;233515;233516;233517;233518;233519;233520;233521;233522;233523 185563;185564;185565;185566;185567;185568;185569;185570;185571;185572;185573;185574;185575;185576;185577;185578 185571 15 LCFSTSSHL Unmodified 1050.4804 0.48043033 3567 Q8WVV9 HNRNPLL Heterogeneous nuclear ribonucleoprotein L-like yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 65.515 59.488 2 0.024946 79353 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.912 43.426 81667000 72332000 0 9334600 0 0 0 0 0 0 0 0 0 0 0 0 27701 3567 25295 233524;233525 185579;185580 185579 2 LCGDTSLNNMQR Unmodified 1407.6235 0.62348253 149 O00410 IPO5 Importin-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 37.567 37.819 2 2.263E-08 41874 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 134.25 112.4 61663000 0 0 0 0 2325300 4139600 2530100 3848400 0 5216400 7501100 6785700 7808400 5828300 15680000 27702 149 25296 233526;233527;233528;233529;233530;233531;233532;233533;233534;233535 185581;185582;185583;185584;185585;185586;185587;185588;185589;185590 185588 10 LCGDTSLNNMQR Oxidation (M) 1423.6184 0.61839715 149 O00410 IPO5 Importin-5 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 23.392 23.81 2 0.0069056 24927 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 46.462 38.242 18664000 0 0 0 0 0 0 1302600 0 0 0 2884900 3071800 2598900 2596300 6209800 27703 149 25296 233536;233537;233538;233539;233540;233541 185591;185592;185593 185593 205 3 LCGPYEK Unmodified 865.40039 0.4003891 3633 Q92598 HSPH1 Heat shock protein 105 kDa yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 22.567 18.68 2 0.025219 24563 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.74 72.213 505990000 37371000 451580000 17038000 0 0 0 0 0 0 0 0 0 0 0 0 27704 3633 25297 233542;233543;233544 185594;185595 185594 2 LCIEVTPQSK Unmodified 1173.6064 0.60635913 1839 P61221 ABCE1 ATP-binding cassette sub-family E member 1 yes yes 0 0 0 By MS/MS 2 0 1 1 57.339 51.517 2 0.017663 66350 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.299 37.129 73847000 0 73847000 0 0 0 0 0 0 0 0 0 0 0 0 0 27705 1839 25298 233545 185596 185596 1 LCIGNITNK Unmodified 1031.5434 0.54336494 3406 Q8NC96 NECAP1 Adaptin ear-binding coat-associated protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 58.862 50.656 2 0.035569 69033 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.419 33.846 4800600 4800600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27706 3406 25299 233546 185597 185597 1 LCLASSVMR Oxidation (M) 1051.5154 0.51543563 4326 Q9H0E9 BRD8 Bromodomain-containing protein 8 yes yes 0 1 0 By MS/MS 10 0 1 1 43.912 43.405 2 0.016007 49098 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 50.703 21.327 2716900 0 0 0 0 2716900 0 0 0 0 0 0 0 0 0 0 27707 4326 25300 233547 185598 185598 5792 1 LCLQQGQLCEPLPSLAESR Unmodified 2198.0824 0.082372781 2991 Q6XQN6 NAPRT Nicotinate phosphoribosyltransferase yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 82.323 82.522 3 0.048245 95221 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 22.01 13.51 17716000 0 0 0 0 0 0 0 0 0 0 7169900 0 0 0 10547000 27708 2991 25301 233548;233549 185599 185599 1 LCNEEQELLR Unmodified 1302.6238 0.6238001 2226 Q13042 CDC16 Cell division cycle protein 16 homolog yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 51.045 51.174 2 0.0049755 57151 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 70.816 48.076 155700000 0 0 0 11618000 7846300 8995500 0 6314300 0 20552000 0 27311000 19896000 18967000 34199000 27709 2226 25302 233550;233551;233552;233553;233554;233555;233556;233557;233558 185600;185601;185602;185603;185604;185605;185606;185607 185605 8 LCNNQEENDAVSSAK Unmodified 1677.7264 0.72642727 2681 Q49AR2 C5orf22 UPF0489 protein C5orf22 yes yes 0 0 0 By MS/MS 10 0 1 1 20.653 21.292 2 0.0012694 21130 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.019 49.094 2911300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2911300 27710 2681 25303 233559 185608 185608 1 LCNSEFCGENLSK Unmodified 1556.6599 0.65992761 3002 Q6ZNE5 ATG14 Beclin 1-associated autophagy-related key regulator yes yes 0 0 0 By MS/MS 2 0 1 1 50.143 44.436 2 1.5353E-05 57828 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.616 79.926 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27711 3002 25304 233560 185609 185609 1 LCPEASDIATSVR Unmodified 1417.6871 0.68712864 3998 Q96T51 RUFY1 RUN and FYVE domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 56.501 56.18 2 0.00060699 64071 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 76.143 55.272 117350000 0 22554000 0 5584800 0 9974400 5678000 3548400 4334000 8868800 10642000 14293000 8347300 7805200 15720000 27712 3998 25305 233561;233562;233563;233564;233565;233566;233567;233568;233569;233570;233571;233572;233573 185610;185611;185612;185613;185614;185615;185616;185617;185618;185619;185620;185621;185622 185619 13 LCPEASDIATSVRNLPELK Unmodified 2112.0885 0.088504016 3998 Q96T51 RUFY1 RUN and FYVE domain-containing protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 86.712 81.903 3 7.95E-05 101826 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.874 53.836 47297000 0 47297000 0 0 0 0 0 0 0 0 0 0 0 0 0 27713 3998 25306 233574 185623;185624 185623 2 LCPGGQLPFLLYGTEVHTDTNK Unmodified 2459.2155 0.21549544 140 O00299 CLIC1 Chloride intracellular channel protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4 3.46 3 1 2 1 1 93.565 88.321 3 2.009E-33 112268 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 119.87 112.48 133030000 78230000 33797000 0 0 0 0 0 0 0 0 0 0 0 0 21001000 27714 140 25307 233575;233576;233577;233578 185625;185626;185627;185628;185629 185627 5 LCPNSTGAEIR Unmodified 1216.587 0.58702067 1369 P35998 PSMC2 26S protease regulatory subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 30.801 31.049 2 0.00057665 33415 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 87.639 70.4 77010000 0 0 0 0 10774000 6379900 2357000 0 0 9780100 11720000 22477000 0 7166000 6356800 27715 1369 25308 233579;233580;233581;233582;233583;233584;233585;233586 185630;185631;185632;185633;185634 185632 5 LCPPGIPTPGSGLPPPRK Unmodified 1840.0029 0.0029238935 1224 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 70.529 70.669 3 0.044634 81739 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 19.036 9.2479 18452000 0 0 0 0 0 3005000 2432400 0 0 2797600 0 6123100 4094000 0 0 27716 1224 25309 233587;233588;233589;233590;233591 185635 185635 1 LCQALAINK Unmodified 1029.5641 0.56410038 1246 P29372 MPG DNA-3-methyladenine glycosylase yes yes 0 0 0 By MS/MS 2 0 1 1 48.615 40.789 2 0.01134 56741 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.37 62.713 11843000 11843000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27717 1246 25310 233592 185636 185636 0 LCQDLPCFSREK Unmodified 1551.7174 0.71738291 228 O14929 HAT1 Histone acetyltransferase type B catalytic subunit yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 59.197 53.143 3 0.033936 66278 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 32.068 24.287 35602000 28112000 0 7490100 0 0 0 0 0 0 0 0 0 0 0 0 27718 228 25311 233593;233594 185637;185638 185638 2 LCQEPGEEER Unmodified 1245.5296 0.52956537 3427 Q8NEM2 SHCBP1 SHC SH2 domain-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 15.197 15.336 2 0.031373 14917 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 50.607 25.684 44967000 0 0 0 2217500 1770600 3342500 3155800 1964600 2313000 3877200 0 5176200 5676000 4213100 11260000 27719 3427 25312 233595;233596;233597;233598;233599;233600;233601;233602;233603;233604;233605 185639;185640;185641;185642;185643 185643 4 LCQEQLELLSEK Unmodified 1488.7494 0.74939455 4449 Q9H8G2 CAAP1 Caspase activity and apoptosis inhibitor 1 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 71.384 71.621 2 0.0047471 82376 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 56.548 39.877 15534000 0 0 0 0 0 0 0 0 0 3853700 4914100 6766500 0 0 0 27720 4449 25313 233606;233607;233608 185644 185644 1 LCQVTSTDHGR Unmodified 1272.5881 0.5880833 5173 Q9Y3R4 NEU2 Sialidase-2 yes yes 0 0 0 By MS/MS 10 0 1 1 11.772 11.636 3 0.0074207 10658 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 69.346 64.13 13467000 0 0 0 13467000 0 0 0 0 0 0 0 0 0 0 0 27721 5173 25314 233609 185645 185645 0 LCRDLVHSNK Unmodified 1240.6346 0.63463956 5122 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 0 0 1 By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 14.346 14.573 3 0.011197 13714 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 47.844 31.126 35226000 0 0 0 0 0 2087300 1284700 2477300 4310000 3277500 3316000 5591100 4928600 3034700 4919100 27722 5122 25315 233610;233611;233612;233613;233614;233615;233616;233617;233618;233619 185646 185646 1 LCRVEQDLAMGTDAEGEK Unmodified 2020.9194 0.91938978 1857 P61764 STXBP1 Syntaxin-binding protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 59.52 53.678 3 0.0027203 69119 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 34.649 26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27723 1857 25316 233620 185647 185647 1 LCRVEQDLAMGTDAEGEK Oxidation (M) 2036.9143 0.9143044 1857 P61764 STXBP1 Syntaxin-binding protein 1 yes yes 0 1 1 By MS/MS 2 0 1 1 48.303 44.401 3 7.476E-06 55798 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 88.565 79.401 32480000 0 0 32480000 0 0 0 0 0 0 0 0 0 0 0 0 27724 1857 25316 233621 185648 185648 3012 1 LCSAHGVLVPGGFGVR Unmodified 1624.8508 0.85078035 1061 P17812 CTPS1 CTP synthase 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.099 72.17 3 0.020358 83084 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 21.841 1.4596 67357000 0 0 0 2934200 1500800 9212500 1677900 2298800 4811700 4755100 4465500 11706000 6753600 6296000 10945000 27725 1061 25317 233622;233623;233624;233625;233626;233627;233628;233629;233630;233631;233632;233633 185649 185649 1 LCSIQSENMMMK Unmodified 1470.6339 0.63391256 3242 Q8IWJ2 GCC2 GRIP and coiled-coil domain-containing protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 62.941 57.048 2 0.0035898 73122 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.58 90.58 19176000 0 19176000 0 0 0 0 0 0 0 0 0 0 0 0 0 27726 3242 25318 233634 185650 185650 1 LCSLEEAQR Unmodified 1104.5234 0.52335778 1250 P29466 CASP1 Caspase-1;Caspase-1 subunit p20;Caspase-1 subunit p10 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 29.033 29.54 2 0.027554 30682 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 49.358 31.323 12371000 0 0 0 0 0 0 0 0 0 0 0 0 0 4463900 7906900 27727 1250 25319 233635;233636 185651;185652;185653 185652 3 LCSLFYTNEEVAK Unmodified 1572.7494 0.74939455 1473 P43243 MATR3 Matrin-3 yes yes 0 0 0 By MS/MS 2 0 1 1 77.492 72.717 2 0.004012 90687 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.843 53.926 67954000 0 67954000 0 0 0 0 0 0 0 0 0 0 0 0 0 27728 1473 25320 233637 185654 185654 1 LCSLLDSEDYNTCEGAFGALQK Unmodified 2490.1043 0.10429001 3692 Q92973 TNPO1 Transportin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.77 3.93 6 1 6 1 4 2 1 1 1 1 1 1 85.7 83.625 2;3 0 103508 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 332.06 261.12 1183800000 18853000 1108900000 12545000 0 0 0 0 4693300 5160500 8044900 7140100 6883700 0 0 11574000 27729 3692 25321 233638;233639;233640;233641;233642;233643;233644;233645;233646;233647;233648;233649;233650 185655;185656;185657;185658;185659;185660;185661;185662;185663;185664;185665 185656 10 LCSQMEQLEQENQQLK Unmodified 2004.9245 0.92447516 2689 Q4V328 GRIPAP1 GRIP1-associated protein 1 yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 66.554 61.034 2;3 1.0719E-41 78318 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 190.78 180.17 164730000 0 164730000 0 0 0 0 0 0 0 0 0 0 0 0 0 27730 2689 25322 233651;233652;233653 185666;185667;185668 185668 3 LCSQMEQLEQENQQLK Oxidation (M) 2020.9194 0.91938978 2689 Q4V328 GRIPAP1 GRIP1-associated protein 1 yes yes 0 1 0 By MS/MS 2 0 1 1 47.302 41.739 2 1.2726E-26 54408 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.56 119.95 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27731 2689 25322 233654 185669 185669 4344 1 LCSQYQNQAK Unmodified 1238.5714 0.5713706 4558 Q9NQ38 SPINK5 Serine protease inhibitor Kazal-type 5;Hemofiltrate peptide HF6478;Hemofiltrate peptide HF7665 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 55.89 49.926 2 0.018298 64558 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.88 45.255 379540000 14211000 361590000 3735100 0 0 0 0 0 0 0 0 0 0 0 0 27732 4558 25323 233655;233656;233657 185670 185670 1 LCSSCGLPLGK Unmodified 1190.5788 0.57876417 5054 Q9UPQ0 LIMCH1 LIM and calponin homology domains-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 56.497 49.499 2 0.025594 64334 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 55.549 27.536 37317000 4999900 32317000 0 0 0 0 0 0 0 0 0 0 0 0 0 27733 5054 25324 233658;233659 185671;185672 185671 2 LCSVEQDLAMGSDAEGEK Oxidation (M) 1953.8296 0.82957172 2587 Q15833 STXBP2 Syntaxin-binding protein 2 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 58.31 52.976 2 1.9935E-05 67913 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.944 81.076 23948000 0 23948000 0 0 0 0 0 0 0 0 0 0 0 0 0 27734 2587 25325 233660;233661 185673 185673 4235 1 LCSVEQDLAMGSDAEGEK Unmodified 1937.8347 0.8346571 2587 Q15833 STXBP2 Syntaxin-binding protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 69.79 63.921 2 1.7632E-53 81286 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 182.33 178.79 46143000 0 46143000 0 0 0 0 0 0 0 0 0 0 0 0 0 27735 2587 25325 233662 185674 185674 1 LCTDLEEK Unmodified 1006.4641 0.46411156 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 29.462 29.475 2 0.013375 32084 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 72.492 49.601 76804000 0 0 0 8259300 8553100 9532000 13837000 12812000 9239400 0 14572000 0 0 0 0 27736 2556 25326 233663;233664;233665;233666;233667;233668;233669 185675;185676;185677 185677 3 LCTFILK Unmodified 893.50446 0.50446024 1751 P55010 EIF5 Eukaryotic translation initiation factor 5 yes yes 0 0 0 By MS/MS 2 0 1 1 78.077 69.946 2 0.033331 91911 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.89 44.969 60986000 60986000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27737 1751 25327 233670 185678 185678 1 LCTFTITQK Unmodified 1110.5743 0.57433072 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 By MS/MS 2 0 1 1 62.289 54.034 2 0.001064 72967 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 130.22 90.558 86710000 86710000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27738 2775 25328 233671 185679 185679 1 LCTLTVPLGVTQEIK Unmodified 1670.9277 0.92769326 5370 yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 70.753 71.069 3 0.040399 81846 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 27.029 11.867 + 44044000 0 0 0 0 0 0 0 0 9549400 0 0 15244000 0 0 19250000 27739 5370 25329 233672;233673;233674 185680 185680 0 LCTMPPVGTDLNTVK Unmodified 1644.8215 0.82151363 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS 2 0 1 1 77.654 72.879 2 1.4044E-07 90946 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.345 76.134 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27740 5049 25330 233675 185681 185681 1 LCTQLEGLQSTVTGHVER Unmodified 2027.0106 0.010588046 2927 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 72.669 72.822 3 0.00012272 82983 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 56.424 46.894 40007000 0 0 0 0 0 0 2829100 0 7739800 8436200 8556500 0 6090000 6355200 0 27741 2927 25331 233676;233677;233678;233679;233680;233681 185682;185683;185684;185685;185686 185685 5 LCTVATLR Unmodified 932.51134 0.51133653 64 CON__P02768-1;P02768 ALB Serum albumin yes no 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 41.778 41.94 2 0.030702 46472 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 55.37 24.081 + 254770000 0 0 0 201850000 5757700 8626400 0 6610000 0 0 10448000 15363000 0 0 6115300 27742 64 25332 233682;233683;233684;233685;233686;233687;233688 185687;185688;185689 185687 3 LCTVNSVEEK Unmodified 1177.5649 0.56488824 1656;1655 P51532;P51531 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.277 27.475 2 0.00039395 29658 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 138.06 72.816 280480000 0 0 0 14074000 14601000 22229000 13730000 15632000 17301000 20712000 29823000 35484000 28185000 22040000 46670000 27743 1656;1655 25333 233689;233690;233691;233692;233693;233694;233695;233696;233697;233698;233699;233700 185690;185691;185692;185693;185694;185695;185696;185697;185698;185699;185700;185701 185690 11 LCVIAECGELK Unmodified 1290.6312 0.63119367 2162 Q08752 PPID Peptidyl-prolyl cis-trans isomerase D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 67.494 61.833 2 0.010418 81915 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.465 42.599 103290000 10942000 87397000 4948100 0 0 0 0 0 0 0 0 0 0 0 0 27744 2162 25334 233701;233702;233703;233704 185702;185703;185704;185705 185704 2 LCVPAMNVNDSVTK Unmodified 1546.7483 0.74834869 377;3868 O43865;Q96HN2 AHCYL1;AHCYL2 Putative adenosylhomocysteinase 2;Putative adenosylhomocysteinase 3 no no 0 0 0 By MS/MS 2.5 0.5 1 1 2 74.046 69.495 2 0.0013123 87302 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.03 83.707 487790000 0 487790000 0 0 0 0 0 0 0 0 0 0 0 0 0 27745 377;3868 25335 233705;233706 185706 185706 1 LCVPAMNVNDSVTK Oxidation (M) 1562.7433 0.74326331 377;3868 O43865;Q96HN2 AHCYL1;AHCYL2 Putative adenosylhomocysteinase 2;Putative adenosylhomocysteinase 3 no no 0 1 0 By MS/MS 2 0 1 1 55.097 49.291 2 0.0087588 63825 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.435 27.277 177970000 0 177970000 0 0 0 0 0 0 0 0 0 0 0 0 0 27746 377;3868 25335 233707 185707 185707 479 0 LCVQNSHQEAR Unmodified 1340.6255 0.62553144 4333 Q9H0L4 CSTF2T Cleavage stimulation factor subunit 2 tau variant yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 11.471 11.724 3 0.029424 10142 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 25.42 11.912 11125000 0 0 0 0 0 0 0 0 0 2987000 0 4956600 0 3181400 0 27747 4333 25336 233708;233709;233710 185708 185708 1 LCVQNSPQEAR Unmodified 1300.6194 0.61938343 1329 P33240 CSTF2 Cleavage stimulation factor subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 25.088 25.295 2 1.9284E-05 25624 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 125.56 95.754 90939000 0 0 0 5865600 3195800 5438200 5777500 0 4530400 7599200 8662600 12127000 7792400 7850500 22100000 27748 1329 25337 233711;233712;233713;233714;233715;233716;233717;233718;233719;233720;233721;233722 185709;185710;185711;185712;185713;185714;185715;185716;185717;185718;185719;185720;185721 185712 13 LCYSSDHEK Unmodified 1137.4761 0.47607323 1120 P21266 GSTM3 Glutathione S-transferase Mu 3 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 2 1 1 1 1 1 2 2 2 10.055 10.191 2;3 0.022503 7934 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 58.981 22.585 20492000 0 0 0 1285200 487970 0 1191800 0 342930 615570 0 2762100 2489600 4496900 6819800 27749 1120 25338 233723;233724;233725;233726;233727;233728;233729;233730;233731;233732;233733;233734;233735 185722;185723 185723 2 LCYVALDFENEMATAASSSSLEK Oxidation (M) 2551.1458 0.14582048 1958 P68032;P63267;P68133;P62736 ACTC1;ACTG2;ACTA1;ACTA2 Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, aortic smooth muscle yes no 0 1 0 By MS/MS By MS/MS 2.67 0.471 1 2 2 1 97.945 94.535 2;3 0.00019038 113444 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 56.488 49.39 217070000 195810000 21258000 0 0 0 0 0 0 0 0 0 0 0 0 0 27750 1958 25339 233736;233737;233738 185724;185725 185724 3143 2 LCYVALDFEQEMATAASSSSLEK Oxidation (M) 2565.1615 0.16147054 1951;1815 P60709;Q6S8J3;P63261 ACTB;POTEE;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.85 3.67 1 17 8 13 7 13 6 1 1 1 1 2 2 2 1 2 89.245 86.779 2;3 1.297E-107 84622 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 160.81 141.97 2866600000 870810000 1446800000 231450000 24966000 21491000 11642000 0 11365000 0 83396000 55716000 47437000 0 14992000 46484000 27751 1815;1951 25340 233739;233740;233741;233742;233743;233744;233745;233746;233747;233748;233749;233750;233751;233752;233753;233754;233755;233756;233757;233758;233759;233760;233761;233762;233763;233764;233765;233766;233767;233768;233769;233770;233771;233772;233773;233774;233775;233776;233777 185726;185727;185728;185729;185730;185731;185732;185733;185734;185735;185736;185737;185738;185739;185740;185741;185742;185743;185744;185745;185746;185747;185748;185749;185750;185751;185752;185753;185754;185755;185756;185757;185758;185759;185760;185761;185762;185763;185764;185765;185766;185767;185768 185739 2945 41 LCYVALDFEQEMATAASSSSLEK Unmodified 2549.1666 0.16655592 1951;1815 P60709;Q6S8J3;P63261 ACTB;POTEE;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2.56 1.92 2 39 6 3 9 24 14 2 1 98.906 95.222 2;3;4 6.608E-174 113356 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 308.04 301.6 18524000000 8256300000 8239000000 2019000000 6887600 0 0 0 0 0 2446000 0 0 0 0 0 27752 1815;1951 25340 233778;233779;233780;233781;233782;233783;233784;233785;233786;233787;233788;233789;233790;233791;233792;233793;233794;233795;233796;233797;233798;233799;233800;233801;233802;233803;233804;233805;233806;233807;233808;233809;233810;233811;233812;233813;233814;233815;233816;233817;233818;233819;233820;233821;233822;233823;233824;233825;233826;233827 185769;185770;185771;185772;185773;185774;185775;185776;185777;185778;185779;185780;185781;185782;185783;185784;185785;185786;185787;185788;185789;185790;185791;185792;185793;185794;185795;185796;185797;185798;185799;185800;185801;185802;185803;185804;185805;185806;185807;185808;185809;185810;185811;185812;185813;185814;185815;185816;185817;185818;185819;185820;185821;185822;185823;185824;185825;185826 185823 53 LCYVGYNIEQEQK Unmodified 1642.7661 0.76610724 1836 P61160 ACTR2 Actin-related protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 62.841 62.428 2 1.2186E-40 77887 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 188.87 172.34 244110000 0 135080000 0 7001700 4461600 5490500 6413100 0 3505600 11369000 13318000 10269000 10309000 10596000 26302000 27753 1836 25341 233828;233829;233830;233831;233832;233833;233834;233835;233836;233837;233838;233839 185827;185828;185829;185830;185831;185832;185833;185834;185835;185836;185837;185838;185839;185840;185841 185829 15 LDADKYENDPELEK Unmodified 1677.7734 0.77336069 4177 Q9BV57 ADI1 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 6.82 3.81 5 2 10 2 4 1 1 1 1 1 1 1 1 1 2 43.507 41.329 2;3 2.8424E-30 55166 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 162.32 126.81 594000000 98217000 383160000 10853000 1900500 2444800 2159400 0 2790600 0 4638100 19614000 13369000 0 10346000 44514000 27754 4177 25342 233840;233841;233842;233843;233844;233845;233846;233847;233848;233849;233850;233851;233852;233853;233854;233855;233856 185842;185843;185844;185845;185846;185847;185848;185849;185850;185851;185852;185853;185854;185855 185851 14 LDADMPEVAVEGPNGK Unmodified 1640.7716 0.77158655 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 67.699 67.333 2 2.3946E-23 76682 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 119.39 103.81 143520000 0 41235000 0 5542400 5164200 7877800 7561800 7067900 5016700 7325900 8770100 12105000 10289000 8492200 17074000 27755 2172 25343 233857;233858;233859;233860;233861;233862;233863;233864;233865;233866;233867;233868;233869 185856;185857;185858;185859;185860;185861;185862;185863;185864;185865;185866;185867;185868 185860 13 LDADPSLQR Unmodified 1013.5142 0.5141733 69;88 CON__P08729;CON__Q3KNV1;P08729 KRT7 Keratin, type II cytoskeletal 7 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 33.551 33.615 2 0.00387 36759 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 100.02 49.41 + 76239000 0 0 0 7989000 11568000 11258000 0 11643000 0 0 0 21513000 12268000 0 0 27756 69;88 25344 233870;233871;233872;233873;233874;233875;233876;233877 185869;185870;185871;185872;185873;185874;185875;185876 185873 8 LDADYIK Unmodified 836.42798 0.42798405 3609 Q92503 SEC14L1 SEC14-like protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 1 2 2 2 2 38.122 38.289 2 0.020538 43439 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 108.24 19.504 447900000 0 0 0 24020000 19718000 54408000 34036000 33982000 39625000 47002000 16313000 39919000 43891000 37951000 57035000 27757 3609 25345 233878;233879;233880;233881;233882;233883;233884;233885;233886;233887;233888;233889;233890;233891;233892;233893;233894;233895;233896;233897;233898;233899;233900 185877;185878;185879;185880;185881 185881 5 LDADYPLR Unmodified 961.4869 0.48689592 343 O43583 DENR Density-regulated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 49.531 49.669 2 0.0087284 54890 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.212 56.062 63730000 0 0 0 0 5104000 0 0 0 0 0 0 0 0 12249000 46376000 27758 343 25346 233901;233902;233903;233904;233905 185882;185883;185884;185885;185886 185882 5 LDAEPRPPPTQEAA Unmodified 1490.7365 0.73652168 5090 Q9Y285 FARSA Phenylalanine--tRNA ligase alpha subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.987 41.166 2 6.9151E-21 45961 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 148.13 134.54 313990000 0 0 0 16496000 16689000 19802000 26522000 20996000 17328000 26055000 33318000 43521000 27005000 24250000 42007000 27759 5090 25347 233906;233907;233908;233909;233910;233911;233912;233913;233914;233915;233916;233917 185887;185888;185889;185890;185891;185892;185893;185894;185895;185896 185893 5 LDAEVPTR Unmodified 899.47125 0.47124585 2346 Q13835 PKP1 Plakophilin-1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 33.136 33.099 2 0.006809 36655 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 95.909 35.149 50616000 0 0 0 37376000 0 0 0 0 0 0 0 0 13240000 0 0 27760 2346 25348 233918;233919 185897;185898;185899;185900 185898 4 LDAEVPTRYR Unmodified 1218.6357 0.63568542 2346 Q13835 PKP1 Plakophilin-1 yes yes 0 0 1 By MS/MS By matching 10 0 2 1 1 41.081 40.586 3 0.016442 45762 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 70.1 41.144 20187000 0 0 0 16808000 3379200 0 0 0 0 0 0 0 0 0 0 27761 2346 25349 233920;233921 185901 185901 0 LDAEVSK Unmodified 760.39668 0.39668393 1340 P35221 CTNNA1 Catenin alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By matching 2 0 3 1 1 1 15.49 12.237 2 0.02978 17699 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.262 17.415 245240000 21386000 223210000 642590 0 0 0 0 0 0 0 0 0 0 0 0 27762 1340 25350 233922;233923;233924 185902 185902 1 LDAFLQPLSK Unmodified 1130.6336 0.63356015 1418 P40692 MLH1 DNA mismatch repair protein Mlh1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 77.678 76.551 2 0.00058735 95530 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.3 92.15 678290000 10380000 169630000 9997700 21748000 22999000 37690000 38535000 34843000 28491000 43713000 48696000 59662000 41660000 44541000 65698000 27763 1418 25351 233925;233926;233927;233928;233929;233930;233931;233932;233933;233934;233935;233936;233937;233938;233939;233940 185903;185904;185905;185906;185907;185908;185909;185910;185911;185912;185913;185914;185915;185916;185917;185918;185919;185920 185907 17 LDAFVEGVVK Unmodified 1075.5914 0.59136099 1122 P21283 ATP6V1C1 V-type proton ATPase subunit C 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.42 3.66 3 1 8 1 2 1 1 1 1 1 1 1 1 1 72.249 70.671 2 0.008804 80598 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.153 27.849 295120000 17575000 239380000 11358000 0 1696000 3644700 1708400 0 0 3897800 4295400 0 2043300 3365300 6158900 27764 1122 25352 233941;233942;233943;233944;233945;233946;233947;233948;233949;233950;233951;233952 185921;185922;185923;185924;185925;185926;185927;185928 185923 8 LDAGNQLALIEELHK Unmodified 1662.8941 0.89408495 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 82.35 81.727 3 0.00023085 94316 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 65.467 53.853 194160000 0 113010000 0 0 1251100 11612000 0 0 4940200 0 11029000 0 0 22335000 29982000 27765 3641 25353 233953;233954;233955;233956;233957;233958;233959 185929;185930;185931;185932;185933 185929 5 LDAIEDLMVVPDK Oxidation (M) 1472.7432 0.74324654 1694 P52701 MSH6 DNA mismatch repair protein Msh6 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 2 1 1 1 1 79.737 79.752 2 0.00054705 92446 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 69.672 59.718 44427000 0 0 0 2168600 3814300 8044000 5210800 0 0 0 6113400 6918300 3964800 0 8193000 27766 1694 25354 233960;233961;233962;233963;233964;233965;233966;233967;233968 185934;185935;185936;185937;185938;185939;185940 185937 2744 6 LDAIEDLMVVPDK Unmodified 1456.7483 0.74833192 1694 P52701 MSH6 DNA mismatch repair protein Msh6 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 87.127 87.279 2 0.0024326 100886 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.676 40.812 5454000 0 0 0 0 0 0 0 1188500 0 0 0 0 0 1447100 2818400 27767 1694 25354 233969;233970;233971 185941;185942 185941 2 LDAINVEK Unmodified 900.49165 0.49164694 1719 P53611 RABGGTB Geranylgeranyl transferase type-2 subunit beta yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 40.626 36.304 2 0.024862 47495 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.41 61.652 331480000 0 328770000 2709400 0 0 0 0 0 0 0 0 0 0 0 0 27768 1719 25355 233972;233973 185943 185943 0 LDALDSFGSTR Unmodified 1180.5724 0.57241646 4888 Q9UGR2 ZC3H7B Zinc finger CCCH domain-containing protein 7B yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 62.392 62.469 2 0.0019204 71604 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 70.1 52.714 53263000 0 0 0 5209500 3013600 3960200 0 0 0 5406500 6993000 6867700 3745600 5816600 12250000 27769 4888 25356 233974;233975;233976;233977;233978;233979;233980;233981;233982 185944;185945;185946;185947;185948;185949;185950;185951 185949 8 LDALEIACEVR Unmodified 1287.6493 0.64928657 2921 Q6P1N0 CC2D1A Coiled-coil and C2 domain-containing protein 1A yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 79.905 79.972 2 0.0057147 92492 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 58.37 41.139 11612000 0 0 0 0 682430 1814400 1208800 0 0 0 2128400 0 1202700 0 4575200 27770 2921 25357 233983;233984;233985;233986;233987;233988;233989 185952;185953;185954 185952 2 LDAPVDYFYRPETQHR Unmodified 2005.9646 0.96462413 5244 Q9Y5Q8 GTF3C5 General transcription factor 3C polypeptide 5 yes yes 0 0 1 By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.833 71.902 4 0.012463 82476 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 34.498 30.657 97018000 0 0 0 2588000 1745400 9530900 3194400 5070700 5884400 6581700 6640300 10219000 7925700 7813800 29824000 27771 5244 25358 233990;233991;233992;233993;233994;233995;233996;233997;233998;233999;234000;234001 185955;185956;185957;185958 185958 4 LDASESLRK Unmodified 1017.5455 0.54547343 2040 Q00610 CLTC Clathrin heavy chain 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 20.336 19.499 2 1.7186E-15 26794 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 195.06 76.32 1242400000 64453000 506400000 321190000 12854000 13682000 32813000 17602000 18147000 15573000 36392000 37618000 37360000 29497000 33924000 64915000 27772 2040 25359 234002;234003;234004;234005;234006;234007;234008;234009;234010;234011;234012;234013;234014;234015;234016;234017 185959;185960;185961;185962;185963;185964;185965;185966;185967;185968;185969 185966 7 LDASISNNSTSK Unmodified 1235.5994 0.59935949 970 P12757 SKIL Ski-like protein yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 22.422 22.697 2 0.010588 23701 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 46.334 26.005 26346000 0 0 0 0 0 2667700 2004500 0 1569900 2559600 0 8231900 0 4044700 5267400 27773 970 25360 234018;234019;234020;234021;234022;234023;234024;234025 185970;185971;185972;185973;185974 185971 5 LDDAIEDCTNAVK Unmodified 1462.661 0.66097347 4035 Q99615 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.71 1 2 22 1 2 2 1 1 2 2 2 2 2 1 2 2 3 44.864 44.537 2 1.2902E-13 59733 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 125.22 99.831 1135300000 21217000 622990000 0 19150000 17904000 25718000 35594000 22105000 29744000 37157000 48839000 36941000 53813000 55403000 108760000 27774 4035 25361 234026;234027;234028;234029;234030;234031;234032;234033;234034;234035;234036;234037;234038;234039;234040;234041;234042;234043;234044;234045;234046;234047;234048;234049;234050 185975;185976;185977;185978;185979;185980;185981;185982;185983;185984;185985;185986;185987;185988;185989;185990;185991;185992;185993;185994;185995 185984 21 LDDCGLTEAR Unmodified 1148.5132 0.51318702 979 P13489 RNH1 Ribonuclease inhibitor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 35.981 35.781 2 0.0081998 38236 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 91.087 69.787 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27775 979 25362 234051;234052;234053 185996;185997;185998 185996 3 LDDDGLIAPGVR Unmodified 1239.6459 0.64591575 1291 P30876 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 64.623 64.78 2 2.5546E-05 74173 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 117.31 92.174 107910000 0 0 0 0 5059800 8643900 6288300 0 5433000 11117000 11974000 14874000 10355000 11702000 22463000 27776 1291 25363 234054;234055;234056;234057;234058;234059;234060;234061;234062;234063 185999;186000;186001;186002;186003;186004;186005;186006;186007;186008 186004 8 LDDDGLIAPGVRVSGDDVIIGK Unmodified 2223.1747 0.17467649 1291 P30876 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 86.707 82.259 3 0.0011663 98999 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 50.358 44.648 76718000 47600000 20867000 8251300 0 0 0 0 0 0 0 0 0 0 0 0 27777 1291 25364 234064;234065;234066;234067;234068 186009;186010;186011;186012 186010 3 LDDDGLPFIGAK Unmodified 1259.6398 0.63976774 4479 Q9H9Y6 POLR1B DNA-directed RNA polymerase I subunit RPA2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 82.176 80.853 2 0.0003975 94109 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 80.688 49.267 148250000 7495500 88973000 0 2205700 3386900 5268300 2844800 0 4508000 0 5574600 0 5789900 6664200 15534000 27778 4479 25365 234069;234070;234071;234072;234073;234074;234075;234076;234077;234078;234079;234080;234081;234082 186013;186014;186015;186016;186017;186018;186019;186020;186021;186022;186023;186024;186025;186026 186022 14 LDDFLDLNHK Unmodified 1228.6088 0.60880197 3568 Q8WVY7 UBLCP1 Ubiquitin-like domain-containing CTD phosphatase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.43 3.65 5 2 14 3 3 1 1 1 1 1 1 1 1 1 2 1 1 2 70.92 69.247 2;3 2.6207E-08 90914 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 154.49 114.42 496090000 106620000 235950000 31919000 3151600 2845400 13354000 5511100 5599700 5642200 8497000 10317000 18499000 5841700 11659000 30681000 27779 3568 25366 234083;234084;234085;234086;234087;234088;234089;234090;234091;234092;234093;234094;234095;234096;234097;234098;234099;234100;234101;234102;234103 186027;186028;186029;186030;186031;186032;186033;186034;186035;186036;186037;186038;186039 186034 13 LDDICLK Unmodified 875.44225 0.44225391 2778 Q5T5Y3 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 49.482 44.184 2 0.032088 57600 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.866 19.831 26895000 0 26895000 0 0 0 0 0 0 0 0 0 0 0 0 0 27780 2778 25367 234104;234105 186040 186040 1 LDDIEEFENIRK Unmodified 1519.7518 0.75183739 3462 Q8NHZ8 CDC26 Anaphase-promoting complex subunit CDC26 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 69.506 68.296 3 9.8052E-15 89199 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 115.14 103.9 357960000 24328000 57289000 13828000 10087000 12560000 21772000 9589200 17682000 20320000 19728000 19041000 33764000 18568000 24922000 54484000 27781 3462 25368 234106;234107;234108;234109;234110;234111;234112;234113;234114;234115;234116;234117;234118;234119;234120;234121 186041;186042;186043;186044;186045;186046;186047;186048;186049;186050;186051;186052;186053;186054;186055;186056 186048 16 LDDIFEPVLIPEPK Unmodified 1623.876 0.87597527 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 93.165 92.117 2 0.00017915 107145 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 94.801 85.114 354490000 15429000 188160000 2654200 3267200 6769900 12166000 5859000 12615000 9604200 21034000 14322000 16404000 7004500 11700000 27503000 27782 2361 25369 234122;234123;234124;234125;234126;234127;234128;234129;234130;234131;234132;234133;234134;234135;234136;234137;234138 186057;186058;186059;186060;186061;186062;186063;186064;186065;186066;186067;186068;186069;186070;186071;186072;186073;186074 186058 17 LDDIGEYTYK Unmodified 1215.5659 0.5659341 3603 Q8WZ42 TTN Titin yes yes 0 0 0 By MS/MS 1 0 1 1 107.56 112.82 2 0.037791 93755 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 63.21 4.494 21709000 21709000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27783 3603 25370 234139 186075 186075 1 LDDIVQHIYK Unmodified 1242.6608 0.66083754 3964 Q96R06 SPAG5 Sperm-associated antigen 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61.084 60.483 3 0.0074507 68651 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 53.756 53.756 213440000 0 25844000 20746000 6972300 8055800 11837000 10184000 12325000 9891500 15571000 17180000 20525000 12437000 13470000 28398000 27784 3964 25371 234140;234141;234142;234143;234144;234145;234146;234147;234148;234149;234150;234151;234152;234153 186076;186077;186078;186079;186080;186081;186082;186083;186084;186085;186086;186087 186081 11 LDDKSSGQHHLKR Unmodified 1519.7855 0.78553755 5402 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 2 3 1 2 1 23.913 24.072 4 0.014534 24773 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 28.903 16.521 + 103530000 0 0 0 5683700 0 7117200 8874300 0 13916000 8659000 0 0 19292000 0 39985000 27785 5402 25372 234154;234155;234156;234157;234158;234159;234160;234161;234162;234163;234164 186088;186089;186090;186091 186091 3 LDDLALLEDLEK Unmodified 1385.729 0.72897668 2308 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 93.006 92.154 2 0.00020295 113805 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.13 58.798 37960000 0 32344000 0 0 0 0 0 0 0 1354500 1076800 0 0 983240 2201000 27786 2308 25373 234165;234166;234167;234168;234169 186092;186093;186094;186095 186093 4 LDDLFLK Unmodified 862.48002 0.48001963 1464 P42704 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72.169 71.686 2 0.020538 81499 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 108.24 22.152 333090000 0 203620000 14787000 7184600 5866600 13631000 7272600 6488000 5551600 11694000 10176000 11090000 7992400 9003200 18733000 27787 1464 25374 234170;234171;234172;234173;234174;234175;234176;234177;234178;234179;234180;234181;234182;234183 186096;186097;186098;186099;186100;186101;186102;186103 186098 8 LDDLHTLYHK Unmodified 1253.6404 0.64043645 4525 Q9HD26 GOPC Golgi-associated PDZ and coiled-coil motif-containing protein yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 42.236 40.592 2;3 0.023344 57636 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.546 39.118 33829000 3712500 0 0 0 0 0 0 0 0 10066000 0 0 6357700 0 13693000 27788 4525 25375 234184;234185;234186;234187 186104;186105 186104 2 LDDLLAYLPSDDSSLPK Unmodified 1860.9357 0.93567499 3532 Q8WTW3 COG1 Conserved oligomeric Golgi complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 94.83 91.173 2 0.026521 110431 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 37.144 27.632 81379000 0 80263000 1116200 0 0 0 0 0 0 0 0 0 0 0 0 27789 3532 25376 234188;234189 186106 186106 1 LDDLVRPYVHK Unmodified 1353.7405 0.74048484 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 48.664 47.925 3 0.014565 53627 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 42.21 10.051 407210000 42447000 0 5782200 11093000 0 42727000 20764000 27678000 27551000 30942000 22405000 35199000 40661000 42330000 57628000 27790 516 25377 234190;234191;234192;234193;234194;234195;234196;234197;234198;234199;234200;234201;234202 186107;186108;186109;186110;186111 186107 4 LDDLVSK Unmodified 788.42798 0.42798405 288 O15498 YKT6 Synaptobrevin homolog YKT6 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 28.364 28.545 2 0.0245 30979 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 82.671 20.013 380550000 0 0 0 24791000 20128000 38009000 34932000 21007000 20768000 45554000 50220000 42175000 0 27446000 55519000 27791 288 25378 234203;234204;234205;234206;234207;234208;234209;234210;234211;234212;234213 186112;186113;186114;186115 186112 4 LDDLVSTGK Unmodified 946.49713 0.49712625 3608 Q92499 DDX1 ATP-dependent RNA helicase DDX1 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 34.806 35.05 2 0.027409 38523 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 49.418 5.0234 55983000 0 0 0 6748600 0 6294400 3026500 0 0 0 0 10355000 14273000 6799200 8485900 27792 3608 25379 234214;234215;234216;234217;234218;234219;234220 186116 186116 1 LDDLYQQK Unmodified 1021.508 0.50802529 214 O14777 NDC80 Kinetochore protein NDC80 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 31.516 31.707 2 0.0073265 34336 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 124.34 73.711 80551000 0 0 0 0 5353400 9112200 5462200 5379500 6323400 8959600 8922200 16523000 6465200 8050100 0 27793 214 25380 234221;234222;234223;234224;234225;234226;234227;234228;234229;234230 186117;186118;186119;186120;186121;186122 186120 6 LDDNEALIEK Unmodified 1158.5768 0.57683314 1826 P61011 SRP54 Signal recognition particle 54 kDa protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.53 2.94 1 2 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 43.444 42.539 2 0.00057472 47575 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 127.4 90.696 1691700000 670090 203280000 0 100550000 105950000 106020000 115050000 143030000 90017000 120990000 160250000 148320000 154320000 101800000 141480000 27794 1826 25381 234231;234232;234233;234234;234235;234236;234237;234238;234239;234240;234241;234242;234243;234244;234245 186123;186124;186125;186126;186127;186128;186129;186130;186131;186132;186133;186134;186135;186136 186124 12 LDDPSCPRPECYR Unmodified 1663.7083 0.70827479 1427 P41091 EIF2S3 Eukaryotic translation initiation factor 2 subunit 3 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 38.404 33.377 3 0.02265 42321 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 41.54 35.645 6964000 3263500 0 3700400 0 0 0 0 0 0 0 0 0 0 0 0 27795 1427 25382 234246;234247 186137 186137 1 LDDPSCPRPECYRSCGSSTPDEFPTDIPGTK Unmodified 3540.5232 0.52318272 1427 P41091 EIF2S3 Eukaryotic translation initiation factor 2 subunit 3 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS 2.5 0.5 2 2 2 1 1 73.999 69.187 4 8.1485E-12 89306 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.825 56.187 165220000 32341000 2988000 129890000 0 0 0 0 0 0 0 0 0 0 0 0 27796 1427 25383 234248;234249;234250;234251 186138;186139;186140 186139 3 LDDTDPVPRGAGSAMSTDAYPK Unmodified 2263.0427 0.042676036 683 O95721 SNAP29 Synaptosomal-associated protein 29 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 63.083 57.746 3 9.9867E-26 74065 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.71 100.62 54743000 0 54743000 0 0 0 0 0 0 0 0 0 0 0 0 0 27797 683 25384 234252;234253 186141 186141 1 LDDTPSGAGK Unmodified 959.45599 0.45598972 4507 Q9HC52 CBX8 Chromobox protein homolog 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.597 11.705 2 0.002198 10201 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 85.676 13.537 42755000 0 0 0 3927900 3115400 3960200 4122600 2931700 3547500 4362600 0 5739400 4193400 0 6854000 27798 4507 25385 234254;234255;234256;234257;234258;234259;234260;234261;234262;234263;234264 186142;186143;186144;186145;186146;186147;186148 186148 7 LDDTQASRK Unmodified 1032.52 0.51998696 3839 Q96FV9 THOC1 THO complex subunit 1 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 6.1816 2.8808 2 5.1274E-06 4347 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 163.99 119.26 43313000 0 43313000 0 0 0 0 0 0 0 0 0 0 0 0 0 27799 3839 25386 234265;234266 186149 186149 1 LDDTYIK Unmodified 866.43855 0.43854874 4035 Q99615 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 38.094 33.201 2 0.023604 43815 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.45 23.348 735390000 28451000 699040000 7903900 0 0 0 0 0 0 0 0 0 0 0 0 27800 4035 25387 234267;234268;234269;234270 186150;186151;186152;186153 186151 4 LDDYQER Unmodified 937.41412 0.4141249 2407 Q14444 CAPRIN1 Caprin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.031 14.193 2 0.015828 13228 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 117.17 44.13 835870000 0 0 0 38139000 71988000 64059000 68509000 46728000 56723000 86232000 78799000 70283000 67969000 74656000 111780000 27801 2407 25388 234271;234272;234273;234274;234275;234276;234277;234278;234279;234280;234281;234282 186154;186155;186156;186157;186158;186159;186160;186161;186162;186163;186164;186165;186166 186160 12 LDDYQERMNK Unmodified 1310.5925 0.59249998 2407 Q14444 CAPRIN1 Caprin-1 yes yes 0 0 1 By MS/MS By MS/MS 2.2 0.4 4 1 3 2 24.543 20.886 2;3 0.0025239 26555 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 86.18 69.407 165400000 0 141890000 23501000 0 0 0 0 0 0 0 0 0 0 0 0 27802 2407 25389 234283;234284;234285;234286;234287 186167;186168;186169;186170;186171;186172;186173;186174 186173 7 LDDYQERMNK Oxidation (M) 1326.5874 0.5874146 2407 Q14444 CAPRIN1 Caprin-1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 12.911 9.7261 3 0.017408 12910 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.831 75.264 87204000 13459000 54575000 19170000 0 0 0 0 0 0 0 0 0 0 0 0 27803 2407 25389 234288;234289;234290 186175 186175 3945 0 LDEAEDDFK Unmodified 1080.4611 0.46113468 2254 Q13217 DNAJC3 DnaJ homolog subfamily C member 3 yes yes 0 0 0 By MS/MS 2 0 1 1 34.444 29.688 2 0.023396 38973 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.23 61.762 5993800 0 5993800 0 0 0 0 0 0 0 0 0 0 0 0 0 27804 2254 25390 234291 186176 186176 1 LDEAEDDFKK Unmodified 1208.5561 0.55609769 2254 Q13217 DNAJC3 DnaJ homolog subfamily C member 3 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.3 2.1 1 9 1 1 1 1 1 1 1 1 1 1 24.431 24.097 3 0.026035 24313 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 24.689 8.0573 143610000 0 53062000 0 7388300 5797700 7973200 10342000 10101000 5881900 11049000 0 0 0 8516300 23497000 27805 2254 25391 234292;234293;234294;234295;234296;234297;234298;234299;234300;234301 186177;186178;186179 186178 2 LDEALEDYK Unmodified 1094.5132 0.51317025 4034 Q99614 TTC1 Tetratricopeptide repeat protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 45.62 45.737 2 0.0035649 51807 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 108.74 94.585 174910000 0 0 0 4419100 6717300 11463000 6710800 9966400 10480000 15793000 28933000 0 11668000 20516000 48247000 27806 4034 25392 234302;234303;234304;234305;234306;234307;234308;234309;234310;234311;234312 186180;186181;186182;186183;186184;186185;186186;186187;186188;186189;186190;186191;186192;186193 186193 13 LDEAQAVLRETK Unmodified 1371.7358 0.73579339 3253 Q8IX03 WWC1 Protein KIBRA yes yes 0 0 1 By MS/MS 3 0 1 1 51.416 46.52 3 0.014049 57628 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 66.498 40.38 6378400 0 6378400 0 0 0 0 0 0 0 0 0 0 0 0 0 27807 3253 25393 234313 186194 186194 0 LDEAVAEAHLGK Unmodified 1251.6459 0.64591575 1164 P23526 AHCY Adenosylhomocysteinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 1 3 2 46.785 41.662 2;3 0.00044917 52671 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 98.04 71.598 500760000 7201800 455010000 38548000 0 0 0 0 0 0 0 0 0 0 0 0 27808 1164 25394 234314;234315;234316;234317;234318;234319 186195;186196;186197;186198;186199;186200 186200 4 LDECEEAFQGTK Unmodified 1425.6082 0.60820962 1844 P61289 PSME3 Proteasome activator complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 38.694 39.153 2 0.0011122 43264 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 88.056 74.679 58476000 0 0 0 0 0 0 0 0 0 6294100 7886100 11527000 5210700 8233600 19325000 27809 1844 25395 234320;234321;234322;234323;234324;234325 186201;186202;186203;186204;186205;186206 186203 6 LDEDASPNEEK Unmodified 1245.5361 0.53609053 4321 Q9H0B6 KLC2 Kinesin light chain 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 14.743 14.573 2 6.3514E-37 13618 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 211.27 171.22 306310000 2643600 0 0 17803000 15374000 23298000 16102000 18738000 22221000 30535000 41099000 30629000 26232000 21679000 39954000 27810 4321 25396 234326;234327;234328;234329;234330;234331;234332;234333;234334;234335;234336;234337;234338 186207;186208;186209;186210;186211;186212;186213;186214;186215;186216;186217;186218;186219;186220 186210 14 LDEDEDEDDADLSK Unmodified 1607.6322 0.63223534 627 O95218 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.2 3.6 1 4 1 1 1 1 1 45.962 47.218 2 8.57E-39 92318 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 161.94 151.99 41582000 17457000 0 0 0 0 0 2618100 4195000 0 0 7620700 0 9691100 0 0 27811 627 25397 234339;234340;234341;234342;234343 186221;186222;186223 186221 3 LDEDLTTLGQMSK Unmodified 1449.7021 0.70211 3947 Q96PE2 ARHGEF17 Rho guanine nucleotide exchange factor 17 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.207 73.272 2 0.018019 84685 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 38.567 7.4937 742030000 0 0 0 26507000 19604000 32549000 30346000 20313000 46761000 44420000 123080000 84276000 55508000 74813000 183850000 27812 3947 25398 234344;234345;234346;234347;234348;234349;234350;234351;234352;234353;234354;234355 186224;186225 186225 2 LDEEAENLVATVVPTHLAAAVPEVAVYLK Unmodified 3060.6383 0.63831777 2509 Q15257 PPP2R4 Serine/threonine-protein phosphatase 2A activator yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 100.23 94.831 3 1.1014E-30 118834 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 92.412 88.898 50863000 12791000 38071000 0 0 0 0 0 0 0 0 0 0 0 0 0 27813 2509 25399 234356;234357;234358 186226;186227 186227 2 LDEFGEQLSK Unmodified 1164.5663 0.56626845 1041 P16615;O14983 ATP2A2;ATP2A1 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 yes no 0 0 0 By MS/MS By matching 10 0 2 1 1 51.725 51.486 2 0.0079547 58973 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 74.173 44.097 11969000 0 0 0 4972500 0 0 0 6996600 0 0 0 0 0 0 0 27814 1041 25400 234359;234360 186228 186228 1 LDEFNELAIQK Unmodified 1318.6769 0.67688153 672 O95613 PCNT Pericentrin yes yes 0 0 0 By MS/MS 10 0 1 1 71.552 71.659 2 0.030632 82477 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 38.55 17.102 3137200 0 0 0 0 0 0 0 0 0 3137200 0 0 0 0 0 27815 672 25401 234361 186229 186229 1 LDEFYIGQIPLK Unmodified 1434.7759 0.7758673 245 O15047 SETD1A Histone-lysine N-methyltransferase SETD1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 87.81 87.919 2 0.0023325 101707 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.334 67.577 34602000 0 0 0 0 1179000 3037700 1444000 2291900 2529900 4997800 3069900 3708300 1551800 2994500 7797600 27816 245 25402 234362;234363;234364;234365;234366;234367;234368;234369;234370;234371;234372 186230;186231;186232;186233;186234;186235;186236 186232 6 LDEGWVPLEIMIK Oxidation (M) 1557.8113 0.81126652 811 P05455 SSB Lupus La protein yes yes 0 1 0 By MS/MS 2 0 1 1 96.495 91.674 2 0.0011908 113559 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.306 63.712 137580000 0 137580000 0 0 0 0 0 0 0 0 0 0 0 0 0 27817 811 25403 234373 186237 186237 971 1 LDEGWVPLEIMIK Unmodified 1541.8164 0.8163519 811 P05455 SSB Lupus La protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 3 1 99.136 94.464 2 0.0033537 117704 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.53 79.998 189090000 32031000 153620000 3445800 0 0 0 0 0 0 0 0 0 0 0 0 27818 811 25403 234374;234375;234376;234377;234378 186238;186239;186240;186241;186242 186241 4 LDEHSQIFAR Unmodified 1214.6044 0.60438529 3216 Q8IUC6 TICAM1 TIR domain-containing adapter molecule 1 yes yes 0 0 0 By MS/MS 10 0 1 1 39.782 40.523 3 0.023441 44094 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.6 47.486 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27819 3216 25404 234379 186243 186243 1 LDEIYVAGLVAHSDLDERAIEALK Unmodified 2639.3806 0.38064652 407 O60506 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.38 0.484 5 3 3 4 1 96.038 91.248 3;4 2.0562E-122 114623 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 177.32 148.91 1152400000 1026600000 125200000 671480 0 0 0 0 0 0 0 0 0 0 0 0 27820 407 25405 234380;234381;234382;234383;234384;234385;234386;234387 186244;186245;186246;186247;186248;186249;186250 186249 6 LDELCNDIATK Unmodified 1290.6126 0.61256672 4326 Q9H0E9 BRD8 Bromodomain-containing protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.379 48.535 2 0.0010421 54759 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 87.298 50.107 75356000 0 0 0 5679900 5162900 7413700 5310900 4598000 4999700 7046500 7279400 7620100 8729400 0 11516000 27821 4326 25406 234388;234389;234390;234391;234392;234393;234394;234395;234396;234397;234398;234399 186251;186252;186253;186254;186255;186256;186257;186258;186259 186255 9 LDELDCLIK Unmodified 1117.5689 0.56891099 4257 Q9BZ23 PANK2 Pantothenate kinase 2, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 6 1 1 1 1 1 1 76.424 76.37 2 0.021251 88595 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 93.374 36.093 43202000 0 0 0 3492900 7431400 7092400 0 0 0 4562400 7543300 13079000 0 0 0 27822 4257 25407 234400;234401;234402;234403;234404;234405 186260;186261;186262 186261 0 LDELDCLVK Unmodified 1103.5533 0.55326092 4466 Q9H999 PANK3 Pantothenate kinase 3 yes yes 0 0 0 By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching 10 0 8 1 1 1 1 1 1 1 1 69.142 69.142 2 0.0036305 79263 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 110.12 62.267 146260000 0 0 0 14647000 32371000 24461000 0 0 1110500 14900000 22513000 34238000 0 2025300 0 27823 4466 25408 234406;234407;234408;234409;234410;234411;234412;234413 186263 186263 1 LDELFEQER Unmodified 1177.5615 0.56151742 4797 Q9P0U4 CXXC1 CXXC-type zinc finger protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 55.663 55.876 2 0.0089221 63543 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 68.224 49.158 157080000 0 0 0 0 53372000 8838500 0 0 8739400 11286000 12862000 18579000 14124000 12156000 17126000 27824 4797 25409 234414;234415;234416;234417;234418;234419;234420;234421;234422;234423 186264;186265;186266;186267;186268;186269;186270;186271;186272 186264 9 LDELLQSQIEK Unmodified 1314.7031 0.70309628 1738 P54277 PMS1 PMS1 protein homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 63.955 63.056 2 0.00031904 71515 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 101.38 24.189 59620000 0 38596000 0 0 0 0 0 0 0 0 0 5795200 5612900 3967900 5647900 27825 1738 25410 234424;234425;234426;234427;234428;234429;234430 186273;186274;186275;186276;186277;186278 186275 5 LDELQASDVSVK Unmodified 1302.6667 0.66671078 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 52.59 51.358 2 2.0702E-26 58535 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 166.93 117.11 1844300000 28042000 865880000 0 58237000 54760000 78557000 74334000 0 74747000 90875000 112010000 98994000 89320000 90841000 127720000 27826 965 25411 234431;234432;234433;234434;234435;234436;234437;234438;234439;234440;234441;234442;234443;234444 186279;186280;186281;186282;186283;186284;186285;186286;186287;186288;186289;186290;186291;186292;186293;186294;186295 186279 17 LDELRDEGK Unmodified 1073.5353 0.53530267 64 CON__P02768-1;P02768 ALB Serum albumin yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 15.913 16.131 2 3.535E-05 16067 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 162.88 100.33 + 437650000 0 0 0 145840000 631000 0 0 145620000 8398500 13092000 19436000 34518000 39848000 13670000 16596000 27827 64 25412 234445;234446;234447;234448;234449;234450;234451;234452;234453;234454 186296;186297;186298;186299;186300;186301;186302 186298 2 LDELSAK Unmodified 774.41233 0.41233399 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 22.255 18.841 2 0.047355 24650 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.741 20.638 325040000 0 321860000 3181000 0 0 0 0 0 0 0 0 0 0 0 0 27828 5071 25413 234455;234456 186303 186303 1 LDEMEFNPVQQPQLNEK Unmodified 2057.9728 0.97280556 5123 Q9Y2W2 WBP11 WW domain-binding protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.15 2.35 1 2 23 3 1 2 2 2 2 2 2 2 2 2 2 2 77.14 76.773 2;3 1.0981E-37 88679 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 172.09 150.22 447380000 0 172390000 0 5368400 15147000 14175000 18535000 28864000 13937000 30698000 21050000 32976000 15803000 31221000 47217000 27829 5123 25414 234457;234458;234459;234460;234461;234462;234463;234464;234465;234466;234467;234468;234469;234470;234471;234472;234473;234474;234475;234476;234477;234478;234479;234480;234481;234482 186304;186305;186306;186307;186308;186309;186310;186311;186312;186313;186314;186315;186316;186317;186318;186319;186320;186321 186313 17 LDEMEFNPVQQPQLNEK Oxidation (M) 2073.9677 0.96772018 5123 Q9Y2W2 WBP11 WW domain-binding protein 11 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching 9.32 2.16 1 1 20 2 2 2 1 2 2 2 2 1 2 2 1 1 70.123 69.724 2;3 2.5891E-57 86137 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 154.74 140.48 389320000 0 66436000 0 22631000 35446000 12874000 38991000 29056000 27929000 33119000 21475000 46295000 26159000 12245000 16669000 27830 5123 25414 234483;234484;234485;234486;234487;234488;234489;234490;234491;234492;234493;234494;234495;234496;234497;234498;234499;234500;234501;234502;234503;234504 186322;186323;186324;186325;186326;186327;186328;186329;186330;186331;186332 186324 6514 11 LDENSAFLQFNWK Unmodified 1610.7729 0.77290718 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS 2 0 1 1 92.614 87.704 2 0.0059291 108935 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.017 66.141 23650000 0 23650000 0 0 0 0 0 0 0 0 0 0 0 0 0 27831 2344 25415 234505 186333 186333 1 LDEQCSAIPTR Unmodified 1288.6082 0.60815004 4946 Q9UJX5 ANAPC4 Anaphase-promoting complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 36.381 36.76 2 5.1851E-05 39577 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 117.7 56.788 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27832 4946 25416 234506;234507;234508;234509;234510;234511;234512;234513 186334;186335;186336;186337;186338;186339;186340;186341 186335 8 LDEREAGITEK Unmodified 1259.6357 0.635745 1808 P60174 TPI1 Triosephosphate isomerase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.87 3 7 4 23 8 4 2 2 2 2 2 2 1 2 2 2 2 2 2 29.908 28.955 2;3 2.1802E-08 94948 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 152.67 64.865 18642000000 2728500000 12690000000 701160000 159090000 17970000 15700000 18216000 34678000 1581000 20463000 426170000 382380000 28812000 259620000 1157100000 27833 1808 25417 234514;234515;234516;234517;234518;234519;234520;234521;234522;234523;234524;234525;234526;234527;234528;234529;234530;234531;234532;234533;234534;234535;234536;234537;234538;234539;234540;234541;234542;234543;234544;234545;234546;234547;234548;234549;234550 186342;186343;186344;186345;186346;186347;186348;186349;186350;186351;186352;186353;186354;186355;186356;186357;186358;186359;186360;186361;186362;186363;186364;186365;186366;186367;186368;186369;186370;186371;186372;186373;186374;186375;186376;186377;186378;186379;186380;186381;186382;186383 186362 33 LDETDDPDDYGDR Unmodified 1524.5852 0.58522557 841 P07384 CAPN1 Calpain-1 catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 31.82 32.242 2 7.3258E-08 34994 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 101.95 94.748 30104000 0 0 0 0 0 0 0 4417000 0 3641100 5645700 5015000 0 2210400 9174700 27834 841 25418 234551;234552;234553;234554;234555;234556;234557;234558;234559 186384;186385;186386;186387;186388;186389;186390;186391 186387 8 LDETPFGK Unmodified 905.44945 0.44944778 4939 Q9UJK0 TSR3 Ribosome biogenesis protein TSR3 homolog yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 41.795 41.883 2 0.010501 46496 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 79.451 42.895 94421000 0 0 0 8307700 9859100 11110000 0 10057000 8006200 13154000 14231000 19695000 0 0 0 27835 4939 25419 234560;234561;234562;234563;234564;234565;234566;234567 186392;186393;186394;186395 186393 4 LDEVISK Unmodified 802.44363 0.44363412 4872 Q9UER7 DAXX Death domain-associated protein 6 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 26.302 26.48 2 0.023409 27018 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 91.9 24.907 188920000 0 0 0 18236000 19019000 18438000 18190000 11681000 0 23346000 0 20997000 22799000 16404000 19814000 27836 4872 25420 234568;234569;234570;234571;234572;234573;234574;234575;234576;234577 186396;186397;186398;186399;186400;186401 186398 6 LDEYIAIAK Unmodified 1034.5648 0.56481189 4971;4820 Q9P2K3;Q9UKL0 RCOR3;RCOR1 REST corepressor 3;REST corepressor 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.53 2.94 1 2 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 61.779 60.811 2 0.00093841 68567 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 143.61 88.106 724400000 451260 257220000 0 26371000 29004000 30193000 32595000 50950000 27825000 50138000 42932000 43572000 41162000 32059000 59926000 27837 4820;4971 25421 234578;234579;234580;234581;234582;234583;234584;234585;234586;234587;234588;234589;234590;234591;234592 186402;186403;186404;186405;186406;186407;186408;186409;186410;186411;186412;186413;186414;186415;186416 186408 15 LDEYLNSPLPDEIDENSMEDIK Oxidation (M) 2594.1582 0.1581593 5270 Q9Y696 CLIC4 Chloride intracellular channel protein 4 yes yes 0 1 0 By MS/MS By MS/MS 2.67 0.471 1 2 1 2 83.843 79.957 3 6.9224E-75 99140 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 144.57 138.51 154540000 639730 153900000 0 0 0 0 0 0 0 0 0 0 0 0 0 27838 5270 25422 234593;234594;234595 186417;186418 186417 6677 2 LDEYLNSPLPDEIDENSMEDIK Unmodified 2578.1632 0.16324468 5270 Q9Y696 CLIC4 Chloride intracellular channel protein 4 yes yes 0 0 0 By MS/MS By MS/MS 2.4 0.49 3 2 1 4 88.47 83.609 2;3 2.8378E-221 104510 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 187.43 180.55 514080000 14367000 499710000 0 0 0 0 0 0 0 0 0 0 0 0 0 27839 5270 25422 234596;234597;234598;234599;234600 186419;186420;186421;186422;186423;186424 186420 6 LDFDGLPSGIGK Unmodified 1217.6292 0.62920306 2228 Q13045 FLII Protein flightless-1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 79.411 79.5 2 0.0015548 91902 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 66.92 38.702 71582000 0 0 0 0 6642900 13757000 7260100 8312600 7991300 0 13098000 14520000 0 0 0 27840 2228 25423 234601;234602;234603;234604;234605;234606;234607 186425;186426;186427;186428;186429;186430 186430 5 LDFDLEPEPPPAPPR Unmodified 1688.841 0.84098675 2604 Q16513 PKN2 Serine/threonine-protein kinase N2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.004 82.065 2 1.0545E-26 94592 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 126.71 114.98 254160000 0 0 0 8710600 12078000 27016000 13609000 15988000 15835000 30783000 27798000 26475000 15962000 19065000 40840000 27841 2604 25424 234608;234609;234610;234611;234612;234613;234614;234615;234616;234617;234618;234619 186431;186432;186433;186434;186435;186436;186437;186438;186439;186440;186441 186435 11 LDFEETENK Unmodified 1123.5033 0.50333384 4326 Q9H0E9 BRD8 Bromodomain-containing protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 37.214 37.446 2 0.038908 41295 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 44.753 12.398 67840000 0 0 0 0 0 0 0 0 5272300 22132000 0 0 24827000 15609000 0 27842 4326 25425 234620;234621;234622;234623 186442 186442 1 LDFEGPDAK Unmodified 990.46583 0.46582612 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.66 43.834 2 0.0077155 48941 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 71.692 43.987 360570000 0 0 0 19104000 14929000 16007000 20500000 19881000 16880000 31232000 32925000 42771000 60035000 30584000 55724000 27843 2172 25426 234624;234625;234626;234627;234628;234629;234630;234631;234632;234633;234634;234635 186443;186444;186445;186446;186447;186448;186449;186450;186451;186452;186453;186454;186455 186447 13 LDFGNSQGK Unmodified 964.46141 0.46140945 476 O75223 GGCT Gamma-glutamylcyclotransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 27.913 26.827 2 0.0010747 32506 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 130.27 69.31 1443800000 59244000 812560000 18499000 152680000 0 26822000 23847000 56165000 20107000 49130000 59635000 61584000 0 40732000 62820000 27844 476 25427 234636;234637;234638;234639;234640;234641;234642;234643;234644;234645;234646;234647;234648;234649 186456;186457;186458;186459;186460;186461;186462;186463;186464;186465;186466 186458 11 LDFHEAQQK Unmodified 1114.5407 0.5407224 2456 Q14966 ZNF638 Zinc finger protein 638 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.163 26.364 2 0.026405 26941 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 49.833 26.791 38513000 0 0 0 2190800 2426300 3384400 3248300 2091700 2225600 3878500 3718200 4424300 4007400 2540900 4376400 27845 2456 25428 234650;234651;234652;234653;234654;234655;234656;234657;234658;234659;234660;234661 186467 186467 1 LDFHEAQQKK Unmodified 1242.6357 0.63568542 2456 Q14966 ZNF638 Zinc finger protein 638 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 32.543 32.679 3 0.011224 36196 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 32.415 3.7067 337910000 0 0 0 22385000 23629000 27141000 25213000 37872000 21536000 30381000 35862000 47929000 34272000 31687000 0 27846 2456 25429 234662;234663;234664;234665;234666;234667;234668;234669;234670;234671;234672 186468 186468 1 LDFIESDSPCSSEALSK Unmodified 1883.8459 0.84587371 329 O43432 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 71.962 71.408 2 3.1213E-31 82486 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 118.37 106.1 155690000 0 76001000 0 4025200 5374300 6204000 5897300 6069500 4708100 6646700 9780900 8867700 5639500 7053600 9426800 27847 329 25430 234673;234674;234675;234676;234677;234678;234679;234680;234681;234682;234683;234684;234685;234686 186469;186470;186471;186472;186473;186474;186475;186476;186477;186478;186479;186480;186481;186482;186483;186484;186485;186486 186471 18 LDFLEGDQK Unmodified 1063.5186 0.51858998 4066 Q99848 EBNA1BP2 Probable rRNA-processing protein EBP2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 56.655 56.998 2 0.0087831 63992 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 68.625 38.013 36924000 0 0 0 0 0 0 0 0 0 0 0 0 13628000 10818000 12479000 27848 4066 25431 234687;234688;234689 186487;186488;186489 186488 3 LDFLGEGQFATVYK Unmodified 1586.7981 0.7980593 1633 P50613 CDK7 Cyclin-dependent kinase 7 yes yes 0 0 0 By MS/MS 2 0 1 1 91.144 86.248 2 0.018243 107184 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.691 31.893 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27849 1633 25432 234690 186490 186490 1 LDFLIPLSK Unmodified 1044.6219 0.62193284 1540 P48506 GCLC Glutamate--cysteine ligase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 93.733 90.059 2 0.039985 112142 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.828 5.7167 9762400 0 8756700 1005800 0 0 0 0 0 0 0 0 0 0 0 0 27850 1540 25433 234691;234692 186491 186491 1 LDFLRPYTVPNK Unmodified 1461.798 0.79799972 4007 Q99436 PSMB7 Proteasome subunit beta type-7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 2 75.386 74.391 2;3 0.0022164 85330 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 101.66 82.311 233090000 26343000 0 0 0 0 11828000 0 0 0 0 0 27883000 9045200 26365000 131620000 27851 4007 25434 234693;234694;234695;234696;234697;234698;234699 186492;186493;186494;186495;186496;186497 186493 6 LDFNLIR Unmodified 889.50215 0.50215205 1307 P31939 ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 78.054 78.247 2 0.024216 89821 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.793 49.13 80191000 0 0 0 0 0 0 0 0 0 0 12698000 10066000 0 8816600 48610000 27852 1307 25435 234700;234701;234702;234703 186498;186499 186498 2 LDFNTDEEK Unmodified 1109.4877 0.48768378 1451 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37.694 37.006 2 1.7586E-05 40632 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 152.63 112.53 509610000 14600000 265360000 0 11280000 11501000 16650000 14571000 12072000 11332000 28035000 17597000 24356000 22408000 18663000 41176000 27853 1451 25436 234704;234705;234706;234707;234708;234709;234710;234711;234712;234713;234714;234715;234716;234717 186500;186501;186502;186503;186504;186505;186506;186507;186508;186509;186510;186511;186512;186513 186511 14 LDFNWVTR Unmodified 1049.5294 0.52942943 3180 Q86W92 PPFIBP1 Liprin-beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.737 79.826 2 0.0050168 91872 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 108.46 74.722 103660000 0 0 0 1697400 0 8803400 6284700 10111000 6967000 6821100 9943300 10548000 6443300 8855200 27189000 27854 3180 25437 234718;234719;234720;234721;234722;234723;234724;234725;234726;234727;234728 186514;186515;186516;186517;186518;186519;186520;186521;186522;186523;186524 186517 11 LDFPSASFDVVLEK Unmodified 1565.7977 0.79772495 915 P0DPD7;P0DPD8 yes no 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 95.557 87.426 2 0.0011672 113035 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.18 81.937 14005000 14005000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27855 915 25438 234729;234730 186525;186526 186526 2 LDFSDTMVQQK Oxidation (M) 1326.6126 0.61256672 2604 Q16513 PKN2 Serine/threonine-protein kinase N2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.15 2.41 2 1 24 3 2 2 2 2 2 2 2 2 2 2 2 2 47.867 47.406 2 8.3075E-06 53965 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 137.13 110.75 298310000 0 76768000 0 16274000 13093000 19970000 17922000 13718000 14259000 26744000 22896000 21480000 22238000 12348000 20604000 27856 2604 25439 234731;234732;234733;234734;234735;234736;234737;234738;234739;234740;234741;234742;234743;234744;234745;234746;234747;234748;234749;234750;234751;234752;234753;234754;234755;234756;234757 186527;186528;186529;186530;186531;186532;186533;186534;186535;186536;186537;186538;186539;186540;186541;186542;186543;186544;186545;186546;186547 186528 4245 18 LDFSDTMVQQK Unmodified 1310.6177 0.61765209 2604 Q16513 PKN2 Serine/threonine-protein kinase N2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62.996 62.064 2 3.8648E-23 77664 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 191.17 164.79 423100000 6680100 260520000 0 7442200 7195800 14089000 10891000 11800000 7684700 15145000 17003000 19464000 9630600 11055000 24498000 27857 2604 25439 234758;234759;234760;234761;234762;234763;234764;234765;234766;234767;234768;234769;234770;234771 186548;186549;186550;186551;186552;186553;186554;186555;186556;186557;186558;186559;186560;186561;186562 186551 15 LDFSSAEPEVK Unmodified 1220.5925 0.5924832 4258 Q9BZ29 DOCK9 Dedicator of cytokinesis protein 9 yes yes 0 0 0 By MS/MS 2 0 1 1 62.602 56.708 2 0.0016238 72769 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.94 58.941 103440000 0 103440000 0 0 0 0 0 0 0 0 0 0 0 0 0 27858 4258 25440 234772 186563 186563 1 LDGARLEGDLSLADK Unmodified 1571.8155 0.81550028 3226 Q8IVF2 AHNAK2 Protein AHNAK2 yes no 0 0 1 By MS/MS By matching By MS/MS 2 0 3 1 1 1 73.989 68.524 3 0.0030505 88317 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 41.542 0 114010000 10978000 93112000 9919500 0 0 0 0 0 0 0 0 0 0 0 0 27859 3226 25441 234773;234774;234775 186564;186565 186564 2 LDGEASINNR Unmodified 1087.5258 0.52580062 661 O95433 AHSA1 Activator of 90 kDa heat shock protein ATPase homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 21.604 21.771 2 0.0033461 21665 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.827 26.22 71143000 0 0 0 4302200 3199500 8358500 6202200 0 0 8486300 8399900 0 11211000 8329000 12655000 27860 661 25442 234776;234777;234778;234779;234780;234781;234782;234783;234784 186566;186567;186568;186569;186570;186571 186567 6 LDGEASINNRK Unmodified 1215.6208 0.62076364 661 O95433 AHSA1 Activator of 90 kDa heat shock protein ATPase homolog 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.68 3.6 9 1 24 4 3 3 2 2 2 2 2 2 2 2 2 2 2 2 15.65 14.846 2;3 1.9166E-16 19467 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 175.91 41.653 1663800000 141800000 397780000 380530000 23845000 17279000 65207000 47284000 32918000 17209000 77794000 85376000 57119000 49191000 66058000 204430000 27861 661 25443 234785;234786;234787;234788;234789;234790;234791;234792;234793;234794;234795;234796;234797;234798;234799;234800;234801;234802;234803;234804;234805;234806;234807;234808;234809;234810;234811;234812;234813;234814;234815;234816;234817;234818 186572;186573;186574;186575;186576;186577;186578;186579;186580;186581;186582;186583;186584;186585;186586;186587;186588;186589;186590;186591;186592;186593;186594;186595;186596;186597;186598;186599;186600;186601;186602;186603;186604;186605;186606;186607;186608 186580 24 LDGEIIPHIPANQEVLNK Unmodified 1999.0738 0.07384023 1283 P30520 ADSS Adenylosuccinate synthetase isozyme 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 5.56 3.98 5 4 1 2 2 1 1 1 1 80.515 78.087 2;3 1.5544E-05 98100 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.84 96.249 1458400000 39907000 1190100000 184340000 0 0 0 0 0 0 0 4171600 7417500 0 6318300 26119000 27862 1283 25444 234819;234820;234821;234822;234823;234824;234825;234826;234827 186609;186610;186611;186612;186613;186614 186610 4 LDGFGDSTK Unmodified 938.43453 0.434526 4459 Q9H900 ZWILCH Protein zwilch homolog yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 32.246 27.739 2 0.039985 34980 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 60.828 30.216 107100000 0 107100000 0 0 0 0 0 0 0 0 0 0 0 0 0 27863 4459 25445 234828;234829 186615;186616 186616 2 LDGFPLLR Unmodified 929.53345 0.53345218 892 P09661 SNRPA1 U2 small nuclear ribonucleoprotein A' yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 82.386 82.541 2 0.0061831 95232 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 119.57 53.894 85507000 0 0 0 0 0 0 0 0 0 0 0 0 0 28261000 57247000 27864 892 25446 234830;234831 186617;186618 186617 2 LDGFSVLMR Oxidation (M) 1052.5325 0.5324659 4771 Q9NZL4 HSPBP1 Hsp70-binding protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 72.082 72.098 2 0.020527 82995 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 47.869 37.177 55559000 0 0 0 3876800 2495300 9954500 4675700 4513700 2361200 6552700 0 9468000 5740700 5920300 0 27865 4771 25447 234832;234833;234834;234835;234836;234837;234838;234839;234840;234841 186619;186620 186619 2 LDGFSVLMR Unmodified 1036.5376 0.53755128 4771 Q9NZL4 HSPBP1 Hsp70-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 80.614 80.751 2 0.0052023 92950 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.438 45.546 28414000 0 0 0 0 0 3455300 0 1871300 0 3465400 2645400 0 0 2817700 14159000 27866 4771 25447 234842;234843;234844;234845;234846;234847 186621 186621 1 LDGGIEPYRLPEVIQK Unmodified 1825.9938 0.993799 4971 Q9UKL0 RCOR1 REST corepressor 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 83.337 78.678 3 3.6643E-31 99005 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.451 66.635 148460000 12194000 102880000 33383000 0 0 0 0 0 0 0 0 0 0 0 0 27867 4971 25448 234848;234849;234850;234851 186622;186623;186624;186625 186622 4 LDGHTISDLSR Unmodified 1212.6099 0.6098646 917 P10244 MYBL2 Myb-related protein B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.561 41.74 3 0.001835 45464 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.343 39.243 86466000 0 0 0 5398100 4853400 9094700 7104600 7072100 4972200 5698400 8576900 10599000 8906500 6249100 7940800 27868 917 25449 234852;234853;234854;234855;234856;234857;234858;234859;234860;234861;234862;234863 186626;186627;186628 186627 3 LDGILSETIPIHGR Unmodified 1519.8358 0.83584179 3880 Q96IP4 FAM46A Protein FAM46A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 77.243 77.356 3 0.0068001 89342 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 40.025 27.859 18511000 0 0 0 0 0 4186400 0 3504300 4230200 0 0 0 3082800 3507100 0 27869 3880 25450 234864;234865;234866;234867;234868;234869 186629;186630;186631;186632 186629 4 LDGLDEDGEK Unmodified 1089.4826 0.4825984 1284 P30533 LRPAP1 Alpha-2-macroglobulin receptor-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 6 4 2 2 1 1 1 1 29.212 25.949 2 0.00361 34828 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.649 79.492 67410000 13775000 47940000 0 0 0 0 0 0 0 0 0 0 0 5694400 0 27870 1284 25451 234870;234871;234872;234873 186633;186634;186635;186636 186634 4 LDGLLER Unmodified 814.45487 0.45486751 2195 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 45.842 45.917 2 0.028147 51926 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 76.847 20.336 28353000 0 0 0 0 2997000 4888700 4707400 3205900 4118600 4617300 3818200 0 0 0 0 27871 2195 25452 234874;234875;234876;234877;234878;234879;234880 186637 186637 1 LDGLVETPTGYIESLPR Unmodified 1858.9676 0.96764382 1761 P55209 NAP1L1 Nucleosome assembly protein 1-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 1 2 1 1 2 2 2 2 1 1 2 86.611 86.703 2;3 1.1576E-31 100514 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 122.39 89.393 323850000 0 0 0 1976300 6732800 8203500 6633800 12747000 10900000 32493000 44230000 34792000 8279100 19328000 137530000 27872 1761 25453 234881;234882;234883;234884;234885;234886;234887;234888;234889;234890;234891;234892;234893;234894;234895;234896;234897;234898 186638;186639;186640;186641;186642;186643;186644;186645;186646;186647;186648;186649;186650;186651;186652;186653;186654 186644 17 LDGNELDLSLSDLNEVPVK Unmodified 2069.0528 0.052830017 3738 Q96AG4 LRRC59 Leucine-rich repeat-containing protein 59 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 90.09 90.2 2 8.4626E-05 104672 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 80.469 68.855 20773000 0 0 0 0 1425400 0 0 1373600 1487000 4599500 2778500 2413300 0 1969000 4726800 27873 3738 25454 234899;234900;234901;234902;234903;234904;234905;234906 186655;186656;186657 186655 3 LDGNLLTQPGQAR Unmodified 1381.7314 0.73137672 4152 Q9BTW9 TBCD Tubulin-specific chaperone D yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 75.89 76.019 3 0.043652 87394 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 20.585 6.8681 7930900 0 0 0 0 0 0 0 0 3669200 0 0 0 4261700 0 0 27874 4152 25455 234907;234908 186658;186659 186658 2 LDGQTPISQR Unmodified 1113.5778 0.57783619 5263 Q9Y620 RAD54B DNA repair and recombination protein RAD54B yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 26.953 26.978 2 0.00025595 28359 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 129.85 58.939 45845000 0 0 0 6946400 0 0 12371000 18243000 8284900 0 0 0 0 0 0 27875 5263 25456 234909;234910;234911;234912;234913;234914 186660;186661;186662;186663;186664;186665 186665 6 LDGSMAQK Unmodified 848.4062 0.40620276 2411 Q14527 HLTF Helicase-like transcription factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 10.761 10.935 2 0.0053152 8769 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 107.32 42.054 79576000 0 0 0 6555500 7431100 0 0 12958000 7441000 0 10471000 7643800 0 8000200 19075000 27876 2411 25457 234915;234916;234917;234918;234919;234920;234921;234922 186666;186667;186668;186669;186670;186671;186672 186670 5 LDGSMSYSER Oxidation (M) 1159.4816 0.48155254 4617 Q9NRZ9 HELLS Lymphoid-specific helicase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 16.215 16.497 2 0.024932 16174 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 40.724 27.687 7769700 0 0 0 0 0 0 1119100 942120 0 0 0 1563300 1749100 1165500 1230600 27877 4617 25458 234923;234924;234925;234926;234927;234928 186673 186673 1 LDGTEINGR Unmodified 973.48287 0.48287317 2260 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 22.273 22.377 2 0.006387 23327 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 75.213 16.295 85517000 0 0 0 0 10587000 0 12804000 8624600 0 0 0 0 30150000 23351000 0 27878 2260 25459 234929;234930;234931;234932;234933;234934;234935;234936 186674;186675;186676;186677;186678;186679 186676 6 LDGTEVNGRK Unmodified 1087.5622 0.56218613 2149 Q08170 SRSF4 Serine/arginine-rich splicing factor 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 12.144 8.9687 2 0.029609 11623 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 78.516 47.094 16870000 4020600 9360200 3489300 0 0 0 0 0 0 0 0 0 0 0 0 27879 2149 25460 234937;234938;234939 186680;186681 186681 1 LDGVRQK Unmodified 814.4661 0.4661009 4031 Q99598 TSNAX Translin-associated protein X yes yes 0 0 1 By matching By MS/MS 2 0 2 1 1 6.9958 4.1295 2 0.049622 5804 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 128.75 39.082 163660000 70745000 0 92918000 0 0 0 0 0 0 0 0 0 0 0 0 27880 4031 25461 234940;234941 186682 186682 0 LDHDVAAAVSGVYRR Unmodified 1627.8431 0.84305243 2964 Q6QNY0 BLOC1S3 Biogenesis of lysosome-related organelles complex 1 subunit 3 yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 55.669 56.059 3 0.00044912 62924 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.685 20.441 10548000 0 0 0 0 0 0 0 0 0 1716600 0 0 0 0 8831400 27881 2964 25462 234942;234943 186683 186683 1 LDHKFDLMYAK Oxidation (M) 1395.6857 0.68567208 1961;3031;4093;1962 P68363;A6NHL2;Q71U36;P0DPH8;P0DPH7;Q9NY65;Q9BQE3;P68366 TUBA1B;TUBAL3;TUBA1A;TUBA8;TUBA1C;TUBA4A Tubulin alpha-1B chain;Tubulin alpha chain-like 3;Tubulin alpha-1A chain;Tubulin alpha-8 chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain no no 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 46.826 46.966 3 0.00014802 52133 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 85.554 60.859 717790000 0 0 0 29199000 23622000 46541000 65753000 56520000 43344000 60125000 0 160400000 76349000 45340000 110590000 27882 1961;3031;4093;1962 25463 234944;234945;234946;234947;234948;234949;234950;234951;234952;234953;234954 186684;186685;186686;186687;186688;186689;186690;186691;186692;186693;186694 186692 3155 6 LDHKFDLMYAK Unmodified 1379.6908 0.69075746 1961;3031;4093;1962 P68363;A6NHL2;Q71U36;P0DPH8;P0DPH7;Q9NY65;Q9BQE3;P68366 TUBA1B;TUBAL3;TUBA1A;TUBA8;TUBA1C;TUBA4A Tubulin alpha-1B chain;Tubulin alpha chain-like 3;Tubulin alpha-1A chain;Tubulin alpha-8 chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain no no 0 0 1 By MS/MS 10 0 1 1 55.327 55.951 3 0.00652 62433 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.275 35.713 161890000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 161890000 27883 1961;3031;4093;1962 25463 234955 186695 186695 1 LDHLAEK Unmodified 824.43922 0.43921744 356;971 O43707;P12814 ACTN4;ACTN1 Alpha-actinin-4;Alpha-actinin-1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 9.6863 9.7989 2 0.028962 7361 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 135.84 38.772 78306000 0 0 0 4087800 2085100 5167400 3725800 3552700 1800900 3808900 0 11025000 3890800 6294400 32866000 27884 356;971 25464 234956;234957;234958;234959;234960;234961;234962;234963;234964;234965;234966 186696;186697 186696 2 LDHVRAEAETLPSLSITK Unmodified 1979.0688 0.068754852 642 O95340 PAPSS2 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 5.43 3.96 4 3 2 1 1 1 1 1 73.048 69.705 3;4 8.5506E-05 89971 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.263 61.265 506310000 417130000 53880000 6949800 0 0 6293100 0 0 0 0 0 0 0 7472000 14588000 27885 642 25465 234967;234968;234969;234970;234971;234972;234973 186698;186699;186700;186701;186702 186698 4 LDHVVTIIK Unmodified 1036.6281 0.62808085 4069 Q99873 PRMT1 Protein arginine N-methyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.78 3.74 1 3 2 3 3 2 1 1 1 1 62.648 59.904 2 9.6941E-06 55805 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 155.07 104.94 887040000 496630000 84523000 236510000 0 0 0 0 0 0 0 0 0 0 16062000 53308000 27886 4069 25466 234974;234975;234976;234977;234978;234979;234980;234981;234982 186703;186704;186705;186706;186707;186708;186709;186710 186703 7 LDHYAIIK Unmodified 971.54402 0.54401687 1908 P62750 RPL23A 60S ribosomal protein L23a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 40.925 40.488 2 0.006389 44993 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 101.28 31.901 420890000 26671000 0 0 17229000 17124000 26200000 29325000 21107000 25968000 41275000 43339000 59126000 29025000 32332000 52168000 27887 1908 25467 234983;234984;234985;234986;234987;234988;234989;234990;234991;234992;234993;234994;234995 186711;186712;186713;186714;186715;186716;186717;186718;186719;186720;186721;186722;186723;186724 186711 12 LDIAQLEENLK Unmodified 1284.6925 0.6925316 478 O75330 HMMR Hyaluronan mediated motility receptor yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 83.738 83.771 2 0.0021012 96674 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.882 60.943 52772000 0 0 0 1851500 2625200 5152300 0 4315200 0 10875000 5756300 6494300 5764300 0 9937800 27888 478 25468 234996;234997;234998;234999;235000;235001;235002;235003;235004 186725;186726;186727;186728;186729;186730;186731;186732;186733 186728 9 LDIDPETITWQR Unmodified 1485.7464 0.74635808 953 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 81.7 81.829 2 0.011599 94115 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 58.699 42.561 70983000 0 0 0 0 0 16443000 0 0 12920000 0 0 0 0 11788000 29833000 27889 953 25469 235005;235006;235007;235008 186734;186735;186736 186736 3 LDIDSPPITAR Unmodified 1196.6401 0.6401021 1000 P14618 PKM Pyruvate kinase PKM yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.546 64.634 2 4.8525E-37 72938 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 182.39 121.8 4288400000 0 0 0 221800000 179400000 245750000 257120000 275640000 193350000 277170000 601600000 695410000 114390000 259700000 967110000 27890 1000 25470 235009;235010;235011;235012;235013;235014;235015;235016;235017;235018;235019;235020 186737;186738;186739;186740;186741;186742;186743;186744;186745;186746;186747;186748;186749;186750;186751;186752;186753;186754;186755 186749 19 LDIETGFHR Unmodified 1086.5458 0.54580778 5131 Q9Y2Z0 SUGT1 Suppressor of G2 allele of SKP1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 50.946 51.043 2 0.011248 56431 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.01 74.88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27891 5131 25471 235021;235022;235023;235024;235025;235026 186756;186757;186758;186759;186760;186761 186758 6 LDIISPQLSSASLLTPQSAECLR Unmodified 2498.305 0.30503873 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 2 1 2 92.134 92.286 2;3 0.000261 107032 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 36.246 33.323 13717000 0 0 0 0 0 0 0 832540 0 4532900 2375600 0 0 0 5976400 27892 2556 25472 235027;235028;235029;235030;235031;235032 186762;186763;186764;186765;186766 186766 5 LDIKLDSEDK Unmodified 1174.6081 0.60813326 980 P13639 EEF2 Elongation factor 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 46.137 45.522 3 0.0016728 59150 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.397 32.12 308310000 0 125960000 0 11754000 5835500 3175300 8492700 13937000 5473800 7570400 27174000 27242000 10794000 17575000 43327000 27893 980 25473 235033;235034;235035;235036;235037;235038;235039;235040;235041;235042;235043;235044;235045;235046 186767;186768;186769;186770;186771;186772;186773;186774;186775 186768 7 LDILDMFTEIK Oxidation (M) 1352.6898 0.6897544 1283 P30520 ADSS Adenylosuccinate synthetase isozyme 2 yes yes 0 1 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 94.96 91.441 2 0.016446 109383 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 59.8 39.47 75307000 0 73467000 1839800 0 0 0 0 0 0 0 0 0 0 0 0 27894 1283 25474 235047;235048;235049 186776;186777;186778 186777 1886 3 LDILDMFTEIK Unmodified 1336.6948 0.69483978 1283 P30520 ADSS Adenylosuccinate synthetase isozyme 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 2 3 1 100.65 96.168 2 5.2115E-09 119685 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 127.76 78.347 158620000 72067000 85930000 621980 0 0 0 0 0 0 0 0 0 0 0 0 27895 1283 25474 235050;235051;235052;235053;235054;235055 186779;186780;186781 186781 2 LDILDQER Unmodified 1000.5189 0.51892433 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 53.671 54.099 2 0.027935 60406 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.047 18.914 7625600 0 0 0 0 0 0 0 0 0 0 0 0 0 2499400 5126200 27896 2344 25475 235056;235057 186782;186783 186782 2 LDILDQERADLEK Unmodified 1556.8046 0.80460124 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.4 3.68 4 1 10 3 2 1 1 1 1 1 1 1 1 1 1 71.734 70.519 2;3 3.6947E-20 88668 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 143.42 76.504 523240000 0 375270000 11883000 5733400 0 14999000 5497800 7264500 9361300 12925000 12850000 12498000 0 14461000 40497000 27897 2344 25476 235058;235059;235060;235061;235062;235063;235064;235065;235066;235067;235068;235069;235070;235071;235072 186784;186785;186786;186787;186788;186789;186790;186791;186792;186793;186794;186795 186787 12 LDILDVLGEVK Unmodified 1212.6966 0.69655434 3307 Q8N142 ADSSL1 Adenylosuccinate synthetase isozyme 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 99.306 91.175 2 0.0054352 117598 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.885 33.534 5672000 5672000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27898 3307 25477 235073;235074 186796;186797 186797 2 LDILGAAETGSGK Unmodified 1230.6456 0.6455814 4302 Q9GZR7 DDX24 ATP-dependent RNA helicase DDX24 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.761 65.847 2 0.00032179 75255 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 81.625 45.681 59253000 0 0 0 2676600 3055500 3875200 3848500 3190300 3613000 6234200 4444300 7169400 6566800 6685800 7893700 27899 4302 25478 235075;235076;235077;235078;235079;235080;235081;235082;235083;235084;235085;235086 186798;186799;186800;186801;186802;186803;186804;186805;186806;186807;186808;186809;186810 186807 13 LDINTLTGEERVPVVNK Unmodified 1896.0316 0.031641064 4814 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.508 76.566 3 9.4306E-14 88315 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 93.754 48.32 259660000 0 0 0 4920200 11117000 22436000 12910000 24767000 27975000 23928000 19271000 37054000 16053000 19434000 39799000 27900 4814 25479 235087;235088;235089;235090;235091;235092;235093;235094;235095;235096;235097;235098 186811;186812;186813;186814;186815;186816;186817;186818;186819;186820;186821;186822 186817 12 LDIPTGTTPQRK Unmodified 1325.7303 0.73031409 1695 P52732 KIF11 Kinesin-like protein KIF11 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 40.874 41.052 3 0.00029555 45838 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 69.451 56.173 184500000 0 0 0 8079100 8735700 20422000 13911000 13617000 9973400 22186000 14145000 21806000 14848000 11754000 25020000 27901 1695 25480 235099;235100;235101;235102;235103;235104;235105;235106;235107;235108;235109;235110;235111 186823;186824;186825;186826;186827;186828;186829;186830;186831;186832;186833;186834;186835 186829 13 LDIQCDLK Unmodified 1003.5008 0.50083142 636 O95260 ATE1 Arginyl-tRNA--protein transferase 1 yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 54.896 50.04 2 0.01951 64656 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.794 16.795 123990000 0 122910000 1081700 0 0 0 0 0 0 0 0 0 0 0 0 27902 636 25481 235112;235113 186836 186836 1 LDISDEFSEAIK Unmodified 1365.6664 0.66637643 4357 Q9H223 EHD4 EH domain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 83.939 80.337 2 0.00064463 99532 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.83 76.409 98498000 0 97006000 1492300 0 0 0 0 0 0 0 0 0 0 0 0 27903 4357 25482 235114;235115;235116 186837;186838;186839 186837 3 LDISDEFSEVIK Unmodified 1393.6977 0.69767655 4403 Q9H4M9 EHD1 EH domain-containing protein 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 89.535 84.382 2 7.5754E-15 106713 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 168.74 108.94 306640000 50085000 251260000 5288600 0 0 0 0 0 0 0 0 0 0 0 0 27904 4403 25483 235117;235118;235119 186840;186841;186842;186843;186844 186842 5 LDLAGRDLTDYLMK Oxidation (M) 1638.8287 0.8287075 1951;1815;1958;2711 P60709;P63261;P68032;P63267;P68133;P62736;Q562R1 ACTB;ACTG1;ACTC1;ACTG2;ACTA1;ACTA2;ACTBL2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, aortic smooth muscle;Beta-actin-like protein 2 no no 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 2 2 1 2 1 1 2 2 2 2 80.156 80.2 2;3 1.6965E-10 92489 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 100.04 57.701 6960900000 0 0 0 98332000 148380000 603360000 237160000 82168000 604680000 189450000 163080000 791360000 364770000 509940000 3168200000 27905 1815;1951;1958;2711 25484 235120;235121;235122;235123;235124;235125;235126;235127;235128;235129;235130;235131;235132;235133;235134;235135;235136;235137;235138;235139;235140 186845;186846;186847;186848;186849;186850;186851;186852;186853;186854;186855;186856;186857;186858;186859;186860;186861 186851 2939 14 LDLAGRDLTDYLMK Unmodified 1622.8338 0.83379288 1951;1815;1958;2711 P60709;P63261;P68032;P63267;P68133;P62736;Q562R1 ACTB;ACTG1;ACTC1;ACTG2;ACTA1;ACTA2;ACTBL2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, aortic smooth muscle;Beta-actin-like protein 2 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 84.387 84.538 3 7.5526E-05 97528 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.04 43.658 234700000 0 0 0 0 0 0 0 12623000 9963200 15799000 0 9675500 0 5412600 181230000 27906 1815;1951;1958;2711 25484 235141;235142;235143;235144;235145;235146 186862;186863;186864;186865;186866;186867 186863 5 LDLAGTLPGSK Unmodified 1070.5972 0.59717465 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65.58 64.463 2 5.0441E-05 81278 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.93 62.191 288210000 5486600 110640000 2199600 10244000 9625000 10883000 11879000 12445000 9610400 14264000 17725000 19869000 13138000 14796000 25402000 27907 1492 25485 235147;235148;235149;235150;235151;235152;235153;235154;235155;235156;235157;235158;235159;235160;235161 186868;186869;186870;186871;186872;186873;186874;186875 186871 3 LDLAVAGK Unmodified 785.4647 0.46470391 3606 Q8WZA9 IRGQ Immunity-related GTPase family Q protein yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 45.149 45.257 2 0.025549 50576 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 58.604 2.0942 6817900 0 0 0 0 0 3619200 0 0 0 3198700 0 0 0 0 0 27908 3606 25486 235162;235163 186876 186876 1 LDLDFPNLPYLLDGK Unmodified 1731.9083 0.90833803 1120 P21266 GSTM3 Glutathione S-transferase Mu 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.43 0.495 4 3 2 4 1 99.757 95.436 2 0.00016197 118444 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.21 115.02 208950000 95576000 111210000 2155300 0 0 0 0 0 0 0 0 0 0 0 0 27909 1120 25487 235164;235165;235166;235167;235168;235169;235170 186877;186878;186879;186880;186881;186882;186883 186877 6 LDLGAQGK Unmodified 800.43922 0.43921744 134 O00257 CBX4 E3 SUMO-protein ligase CBX4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 24.967 25.077 2 0.019937 25060 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 63.21 21.318 33583000 0 0 0 0 4166300 5768000 5930300 0 3630100 5481800 3666300 0 0 4939800 0 27910 134 25488 235171;235172;235173;235174;235175;235176;235177 186884;186885;186886;186887;186888 186887 5 LDLGEDYPSGK Unmodified 1192.5612 0.56118307 295 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 50.356 50.31 2 0.0013651 55893 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.048 57.166 26086000 0 0 0 5367500 0 0 5786500 6317200 0 0 0 0 0 8614700 0 27911 295 25489 235178;235179;235180;235181;235182 186889;186890;186891;186892;186893 186890 5 LDLGGSER Unmodified 845.4243 0.42429566 3516 Q8TEH3 DENND1A DENN domain-containing protein 1A yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 2 1 1 2 1 2 2 2 2 2 1 39.346 39.533 2 0.011863 64748 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 117.93 17.868 248030000 0 0 0 9140400 19605000 10753000 13614000 43099000 14528000 23573000 25939000 34264000 26092000 23067000 4359000 27912 3516 25490 235183;235184;235185;235186;235187;235188;235189;235190;235191;235192;235193;235194;235195;235196;235197;235198;235199;235200;235201 186894;186895;186896;186897;186898 186895 3 LDLIHESILHK Unmodified 1316.7452 0.74523587 1974 P78344 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 2 1 1 1 1 2 67.273 67.505 2;3 4.972E-05 77686 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 94.767 70.916 317750000 0 0 0 0 0 35691000 6702100 22891000 33468000 13800000 14426000 26608000 21736000 20984000 121440000 27913 1974 25491 235202;235203;235204;235205;235206;235207;235208;235209;235210;235211;235212;235213 186899;186900;186901;186902;186903;186904;186905;186906;186907;186908;186909;186910 186900 6 LDLLEDR Unmodified 872.46035 0.46034682 2441 Q14697 GANAB Neutral alpha-glucosidase AB yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 55.391 55.594 2 0.026086 62145 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 79.451 38.329 110020000 0 0 0 0 4061200 4575900 5025400 6290500 2113000 7307600 18011000 15674000 8684100 8676500 29599000 27914 2441 25492 235214;235215;235216;235217;235218;235219;235220;235221;235222;235223;235224 186911;186912;186913;186914 186912 4 LDLLEEK Unmodified 858.46985 0.46984887 2231 Q13085 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 58.008 53.16 2 0.023949 68611 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.04 0 288940000 0 285260000 3685100 0 0 0 0 0 0 0 0 0 0 0 0 27915 2231 25493 235225;235226 186915 186915 1 LDLLGNLPGSK Unmodified 1125.6394 0.63937381 1492 P46013 MKI67 Antigen KI-67 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80.313 79.847 2 0.00032497 92604 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 89.171 67.211 225190000 0 28526000 1610200 9601300 10962000 12589000 13779000 12398000 11442000 20552000 21521000 22951000 13200000 15729000 30333000 27916 1492 25494 235227;235228;235229;235230;235231;235232;235233;235234;235235;235236;235237;235238;235239;235240 186916;186917;186918;186919;186920;186921;186922;186923;186924;186925;186926;186927;186928 186925 13 LDLLSDTNMVDFAMDVYK 2 Oxidation (M) 2120.9646 0.96460864 1809 P60228 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 0 2 0 By MS/MS 2.5 0.5 1 1 2 90.992 86.93 2 6.7548E-05 107997 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.649 61.448 20929000 0 20929000 0 0 0 0 0 0 0 0 0 0 0 0 0 27917 1809 25495 235241;235242 186929 186929 2929;2930 1 LDLLSDTNMVDFAMDVYK Oxidation (M) 2104.9697 0.96969401 1809 P60228 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 0 1 0 By MS/MS By MS/MS 2.4 0.49 3 2 3 2 97.338 91.767 2 1.8333E-47 115999 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 138.77 105.82 143810000 88764000 55044000 0 0 0 0 0 0 0 0 0 0 0 0 0 27918 1809 25495 235243;235244;235245;235246;235247 186930;186931;186932;186933 186933 2929;2930 4 LDLLSDTNMVDFAMDVYK Unmodified 2088.9748 0.97477939 1809 P60228 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 0 0 0 By MS/MS By MS/MS 2.4 0.49 3 2 2 3 99.454 94.567 2 6.2314E-10 117945 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 131.35 121.03 199660000 153570000 46085000 0 0 0 0 0 0 0 0 0 0 0 0 0 27919 1809 25495 235248;235249;235250;235251;235252 186934;186935;186936;186937 186937 4 LDLLTSK Unmodified 788.46437 0.46436956 2973 Q6ULP2 AFTPH Aftiphilin yes yes 0 0 0 By MS/MS 2 0 1 1 55.293 49.479 2 0.029487 64012 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.662 6.6336 37288000 0 37288000 0 0 0 0 0 0 0 0 0 0 0 0 0 27920 2973 25496 235253 186938 186938 1 LDLMAEISNLK Oxidation (M) 1261.6588 0.65878863 3180 Q86W92 PPFIBP1 Liprin-beta-1 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 1 2 2 2 2 2 2 2 2 2 2 2 79.796 79.876 2 1.3743E-05 92289 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 123.75 65.072 192440000 0 0 0 1694700 6417600 11214000 11388000 7725800 17104000 28959000 24874000 22250000 14431000 13505000 32878000 27921 3180 25497 235254;235255;235256;235257;235258;235259;235260;235261;235262;235263;235264;235265;235266;235267;235268;235269;235270;235271;235272;235273;235274;235275;235276 186939;186940;186941;186942;186943;186944;186945;186946;186947;186948;186949;186950;186951;186952;186953;186954;186955;186956;186957;186958;186959;186960 186957 4802 12 LDLMAEISNLK Unmodified 1245.6639 0.663874 3180 Q86W92 PPFIBP1 Liprin-beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 90.025 89.624 2 0.0013382 103705 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.898 65.048 61129000 0 41797000 0 0 0 0 583920 748290 1155000 3356600 2453000 1441600 0 1687200 7906700 27922 3180 25497 235277;235278;235279;235280;235281;235282;235283;235284;235285 186961;186962;186963;186964;186965;186966 186963 6 LDLMDAGTDAMDVLMGR 3 Oxidation (M) 1870.8111 0.81108488 154 O00429 DNM1L Dynamin-1-like protein yes yes 0 3 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 80.977 81.073 2 7.5214E-10 93898 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 86.772 80.331 25324000 0 0 0 0 1795700 0 2049800 0 0 0 7495400 6228500 0 3248100 4507000 27923 154 25498 235286;235287;235288;235289;235290;235291;235292 186967;186968;186969 186968 214;215;216 3 LDLMDEGTDARDVLENK Oxidation (M) 1948.9048 0.90478557 1630 P50570;Q05193;Q9UQ16 DNM2;DNM1;DNM3 Dynamin-2;Dynamin-1;Dynamin-3 yes no 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 6.75 3.85 4 1 7 2 2 1 1 1 1 1 1 2 70.773 68.246 2;3 6.8645E-19 78561 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 101.05 90.679 274140000 66468000 72609000 3406300 0 0 30402000 1299900 13992000 0 0 17949000 26594000 0 0 41418000 27924 1630 25499 235293;235294;235295;235296;235297;235298;235299;235300;235301;235302;235303;235304 186970;186971;186972;186973;186974;186975;186976;186977;186978 186972 2620 8 LDLMDEGTDARDVLENK Unmodified 1932.9099 0.90987095 1630 P50570;Q05193;Q9UQ16 DNM2;DNM1;DNM3 Dynamin-2;Dynamin-1;Dynamin-3 yes no 0 0 1 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 77.198 76.713 3 1.7208E-31 88324 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.152 83.591 250670000 0 177310000 1561000 0 0 4127800 2021500 3319300 2989900 5872100 5454500 4247300 2760700 5540500 35469000 27925 1630 25499 235305;235306;235307;235308;235309;235310;235311;235312;235313;235314;235315;235316 186979;186980;186981;186982;186983;186984 186982 5 LDLNGNTLGEEGCEQLQEVLEGFNMAK Oxidation (M) 3023.3852 0.3852159 1495 P46060 RANGAP1 Ran GTPase-activating protein 1 yes yes 0 1 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 98.287 92.568 3 1.3399E-30 113508 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 93.229 89.818 32847000 18134000 14713000 0 0 0 0 0 0 0 0 0 0 0 0 0 27926 1495 25500 235317;235318 186985;186986 186985 2354 2 LDLNGNTLGEEGCEQLQEVLEGFNMAK Unmodified 3007.3903 0.39030128 1495 P46060 RANGAP1 Ran GTPase-activating protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 99.817 91.687 3 0.00010178 118143 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 38.843 32.616 9395300 9395300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27927 1495 25500 235319 186987 186987 1 LDLNLAAAVHK Unmodified 1163.6663 0.66625727 1436 P41229 KDM5C Lysine-specific demethylase 5C yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 75.376 71.481 3 0.0046506 89622 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.408 40.662 20329000 0 19456000 873600 0 0 0 0 0 0 0 0 0 0 0 0 27928 1436 25501 235320;235321 186988 186988 1 LDLPGNLPGSK Unmodified 1109.6081 0.60807369 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.635 67.718 2 0.0025642 78010 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 67.113 44.042 110300000 0 0 0 9720500 5009600 6065500 7357300 8105400 5770200 12070000 11207000 12474000 9176000 8726000 14614000 27929 1492 25502 235322;235323;235324;235325;235326;235327;235328;235329;235330;235331;235332;235333 186989;186990;186991;186992;186993;186994;186995 186994 7 LDLQQGQNLLQGLSK Unmodified 1653.905 0.90498399 4513 Q9HCE1 MOV10 Putative helicase MOV-10 yes yes 0 0 0 By MS/MS 10 0 1 1 84.646 84.825 2 8.7561E-05 97984 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.258 74.99 7162700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7162700 27930 4513 25503 235334 186996 186996 1 LDLRDDKDTIEK Unmodified 1459.7518 0.75183739 1936 P63000;P15153 RAC1;RAC2 Ras-related C3 botulinum toxin substrate 1;Ras-related C3 botulinum toxin substrate 2 yes no 0 0 2 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 35.401 35.588 3 0.014207 39352 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 62.891 32.955 140470000 0 0 0 14530000 5965300 6115400 14605000 12685000 0 9060300 12895000 18552000 21083000 7313300 17668000 27931 1936 25504 235335;235336;235337;235338;235339;235340;235341;235342;235343;235344;235345 186997;186998;186999;187000 186999 2 LDLSVTEAVVAGIAK Unmodified 1484.845 0.84500949 1134 P22102 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.3 0.64 1 5 4 5 4 1 95.571 90.921 2;3 3.1414E-46 94280 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 159.94 134.28 381190000 313600000 60775000 6817100 0 0 0 0 0 0 0 0 0 0 0 0 27932 1134 25505 235346;235347;235348;235349;235350;235351;235352;235353;235354;235355 187001;187002;187003;187004;187005;187006;187007;187008;187009;187010;187011;187012;187013;187014 187005 14 LDLTDAK Unmodified 774.41233 0.41233399 2688 Q4LE39 ARID4B AT-rich interactive domain-containing protein 4B yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 31.998 32.11 2 0.039143 34929 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 69.176 3.038 18724000 0 0 0 0 0 0 6130500 0 5505600 7087600 0 0 0 0 0 27933 2688 25506 235356;235357;235358 187015 187015 1 LDLTENLTGSK Unmodified 1189.619 0.6190323 1492 P46013 MKI67 Antigen KI-67 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 61.024 60.665 2 1.8152E-21 69403 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 180.67 119.76 514960000 0 216490000 0 15944000 18529000 19578000 23567000 21974000 15210000 29149000 28864000 33641000 23520000 25038000 43458000 27934 1492 25507 235359;235360;235361;235362;235363;235364;235365;235366;235367;235368;235369;235370;235371 187016;187017;187018;187019;187020;187021;187022;187023;187024;187025;187026;187027;187028;187029 187018 10 LDLTGTSGTAVPARR Unmodified 1513.8213 0.82125436 315 O43301 HSPA12A Heat shock 70 kDa protein 12A yes yes 0 0 1 By matching By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 46.267 46.596 3 0.0061611 51371 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 26.729 12.699 17589000 0 0 0 0 0 0 1552000 0 0 3863400 4714300 0 0 2489400 4970300 27935 315 25508 235372;235373;235374;235375;235376 187030;187031 187030 2 LDLTLEIQTVGEQENGDEAPGVWMIPTSDPAANLHPAK Unmodified 4055.9786 0.9786258 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS 2 0 1 1 98.065 89.935 4 5.7414E-12 116332 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.166 46.891 194160000 194160000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27936 1986 25509 235377 187032 187032 1 LDLVTNK Unmodified 801.45962 0.45961853 3377 Q8N9N5 BANP Protein BANP yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 34.946 33.986 2 0.027727 44026 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.068 17.614 5360100000 2896800 5299400000 0 0 0 0 0 6001400 0 7495800 11286000 9125300 6653200 5441400 11791000 27937 3377 25510 235378;235379;235380;235381;235382;235383;235384;235385;235386 187033;187034 187033 2 LDMEEEERNK Oxidation (M) 1307.5663 0.5663448 5188 Q9Y496 KIF3A Kinesin-like protein KIF3A yes yes 0 1 1 By MS/MS 3 0 1 1 8.5293 5.1709 3 0.035026 7022 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 45.433 37.128 4269400 0 4269400 0 0 0 0 0 0 0 0 0 0 0 0 0 27938 5188 25511 235387 187035 187035 1 LDMEIDGQK Unmodified 1047.4907 0.49066067 2194 Q12824 SMARCB1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 43.754 44.148 2 0.0051747 48325 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.296 39.867 64861000 0 0 0 0 0 7456400 0 5362800 0 0 0 12575000 0 13347000 26120000 27939 2194 25512 235388;235389;235390;235391;235392;235393;235394 187036;187037;187038;187039;187040;187041 187038 6 LDMEIDGQK Oxidation (M) 1063.4856 0.48557529 2194 Q12824 SMARCB1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 21.102 21.35 2 0.0050828 20950 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 71.692 36.884 36529000 0 0 0 2831600 0 3424500 3829300 1887700 1748400 2939900 3811600 3796200 3231500 3819400 5209100 27940 2194 25512 235395;235396;235397;235398;235399;235400;235401;235402;235403;235404;235405 187042;187043;187044 187042 3562 3 LDMEIER Oxidation (M) 920.42733 0.42733213 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.14 22.346 2 0.042646 23314 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 52.403 14.757 49181000 0 0 0 2369700 2436700 4017600 2850600 3051300 3005100 5900700 3476600 6871900 5622600 4251800 5326900 27941 2392 25513 235406;235407;235408;235409;235410;235411;235412;235413;235414;235415;235416;235417 187045 187045 1 LDNIFLTR Unmodified 990.54983 0.54983053 4086 Q9BQ52 ELAC2 Zinc phosphodiesterase ELAC protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 72.034 72.319 2 0.035464 82680 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.482 15.507 24560000 0 0 0 0 0 0 0 0 0 0 5494300 7095200 0 3688400 8282300 27942 4086 25514 235418;235419;235420;235421 187046;187047;187048 187046 3 LDNILSGPK Unmodified 955.53385 0.53384611 2830 Q5VZ89 DENND4C DENN domain-containing protein 4C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.56 1 1 13 2 1 1 2 1 1 1 1 1 1 1 1 1 50.757 50.003 2 0.0036211 55307 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.358 58.771 354880000 0 99274000 0 17246000 21029000 0 19528000 23778000 0 19746000 23095000 31538000 37691000 25975000 35984000 27943 2830 25515 235422;235423;235424;235425;235426;235427;235428;235429;235430;235431;235432;235433;235434;235435;235436 187049;187050;187051;187052;187053;187054;187055;187056;187057;187058;187059;187060;187061;187062;187063 187054 12 LDNIYSSDK Unmodified 1053.4979 0.49785453 774 P04114 APOB Apolipoprotein B-100;Apolipoprotein B-48 yes yes 0 0 0 By MS/MS 2 0 1 1 30.744 26.35 2 0.016282 34333 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.219 52.045 24266000 0 24266000 0 0 0 0 0 0 0 0 0 0 0 0 0 27944 774 25516 235437 187064 187064 1 LDNLLLDTEGFVK Unmodified 1475.7872 0.78716026 2604 Q16513 PKN2 Serine/threonine-protein kinase N2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 89.663 88.469 2 2.2341E-22 110155 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 150.46 102.03 449150000 12020000 346550000 6230500 1664400 4135900 0 4293200 6004500 5796800 14373000 8622100 8394900 2994100 6340200 21723000 27945 2604 25517 235438;235439;235440;235441;235442;235443;235444;235445;235446;235447;235448;235449;235450;235451;235452 187065;187066;187067;187068;187069;187070;187071;187072;187073;187074;187075;187076;187077;187078;187079 187067 13 LDNLLLDTEGYVK Unmodified 1491.7821 0.78207489 2603 Q16512 PKN1 Serine/threonine-protein kinase N1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 84.686 83.557 2 6.8539E-25 103472 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 186.74 144.55 97020000 0 83412000 0 0 0 3201700 0 0 0 6072900 4333400 0 0 0 0 27946 2603 25518 235453;235454;235455;235456;235457 187080;187081;187082 187081 3 LDNLVAILDINR Unmodified 1367.7773 0.77726428 1249 P29401 TKT Transketolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 91.659 91.789 2 0.0034341 106175 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.555 62.974 30571000 0 0 0 0 0 0 0 0 0 836060 3019200 2516300 601170 3602300 19996000 27947 1249 25519 235458;235459;235460;235461;235462;235463 187083;187084 187083 2 LDNMLLAEGVAGPEK Oxidation (M) 1571.7865 0.78650834 1413;1412 P40425;P40424 PBX2;PBX1 Pre-B-cell leukemia transcription factor 2;Pre-B-cell leukemia transcription factor 1 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.482 67.564 2 2.5559E-14 77413 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 99.011 68.461 122790000 0 0 0 6386200 8885500 13285000 10289000 6929200 7265200 13734000 13240000 14180000 11111000 6490000 11000000 27948 1413;1412 25520 235464;235465;235466;235467;235468;235469;235470;235471;235472;235473;235474;235475 187085;187086;187087;187088;187089;187090;187091;187092;187093;187094;187095;187096;187097;187098 187086 2222 14 LDNMLLAEGVAGPEK Unmodified 1555.7916 0.79159371 1413;1412 P40425;P40424 PBX2;PBX1 Pre-B-cell leukemia transcription factor 2;Pre-B-cell leukemia transcription factor 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.814 76.874 2 5.4418E-19 88225 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 109 93.107 81470000 0 0 0 2684700 4429800 6583900 4862400 6870600 4690000 8069500 8697300 7616900 6757800 6416300 13791000 27949 1413;1412 25520 235476;235477;235478;235479;235480;235481;235482;235483;235484;235485;235486;235487 187099;187100;187101;187102;187103;187104;187105;187106;187107;187108;187109 187101 11 LDNMNVSR Unmodified 947.44946 0.44946455 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 22.335 22.597 2 0.0095499 23510 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 82.529 32.49 53813000 0 0 0 2596500 0 4895400 2424000 2880800 0 5945800 7651800 6650200 4281700 6334500 10152000 27950 3119 25521 235488;235489;235490;235491;235492;235493;235494;235495;235496;235497 187110;187111;187112;187113;187114;187115;187116;187117;187118 187110 9 LDNMNVSRK Unmodified 1075.5444 0.54442757 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 3 6 1 1 1 1 1 1 1 1 1 15.469 14.513 2 4.0995E-05 21166 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 154.12 108.15 121090000 56194000 17857000 15361000 0 0 4736000 0 0 0 0 6800700 5361800 3101100 3671700 8006200 27951 3119 25522 235498;235499;235500;235501;235502;235503;235504;235505;235506 187119;187120;187121;187122;187123;187124;187125;187126 187122 8 LDNMNVSRK Oxidation (M) 1091.5393 0.53934219 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 1 1 By matching By MS/MS By MS/MS 2 0 3 1 1 1 7.039 4.0471 2 0.021888 6090 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 110.41 53.127 78970000 27283000 20783000 30904000 0 0 0 0 0 0 0 0 0 0 0 0 27952 3119 25522 235507;235508;235509 187127 187127 1 LDNNFEVNFDK Unmodified 1353.6201 0.62009493 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.547 68.626 2 0.00010612 78681 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 110.53 94.904 127320000 0 0 0 3018500 6837100 12263000 5557800 9496200 9952100 12427000 14247000 18683000 9479500 10310000 15049000 27953 3023 25523 235510;235511;235512;235513;235514;235515;235516;235517;235518;235519;235520;235521 187128;187129;187130;187131;187132;187133;187134;187135;187136;187137;187138;187139;187140 187129 13 LDNNQMVMESDILQEDHHTSQK Unmodified 2611.1643 0.16426451 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 65.075 65.386 4 3.3102E-06 74226 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.688 33.526 17898000 0 0 0 0 0 0 0 4647200 0 0 0 0 0 3390400 9860300 27954 2804 25524 235522;235523;235524 187141 187141 1 LDNNWGREER Unmodified 1287.5956 0.59561152 1065 P17931 LGALS3 Galectin-3 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 24.83 25.084 3 0.025026 25467 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.284 34.744 143790000 0 0 0 0 6179200 0 8857700 24501000 6313500 12380000 15200000 17430000 0 17811000 35112000 27955 1065 25525 235525;235526;235527;235528;235529;235530;235531;235532;235533 187142 187142 0 LDNQRLK Unmodified 885.50321 0.50321468 173 O00629 KPNA4 Importin subunit alpha-3 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 9.1014 6.1004 2 0.031126 10541 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 132.72 41.624 382150000 329450000 0 52708000 0 0 0 0 0 0 0 0 0 0 0 0 27956 173 25526 235534;235535 187143 187143 0 LDNSPNMNITQPSK Unmodified 1557.7457 0.74570615 5292 Q9Y6Q9 NCOA3 Nuclear receptor coactivator 3 yes yes 0 0 0 By MS/MS 2 0 1 1 48.33 42.682 2 0.0026027 55645 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.744 58.429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27957 5292 25527 235536 187144 187144 1 LDNTPASPPRSPAEPNDIPIAK Unmodified 2299.1808 0.1808245 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 67.172 61.869 3 4.7334E-07 79365 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.145 56.42 52580000 0 52580000 0 0 0 0 0 0 0 0 0 0 0 0 0 27958 645 25528 235537;235538 187145;187146 187145 2 LDNTTAAVQELGR Unmodified 1386.7103 0.71030693 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 0 By MS/MS 10 0 1 1 52.792 52.994 2 0.0070427 59095 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 58.172 46.125 5421700 0 0 0 0 0 0 0 0 0 0 0 0 0 5421700 0 27959 2495 25529 235539 187147 187147 1 LDNTTAAVQELGRENQSLQIK Unmodified 2327.2081 0.20810188 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6 4 3 3 1 1 1 1 1 1 75.557 73.079 3 1.1419E-29 84483 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 104.61 80.309 286400000 19355000 216690000 14492000 0 0 0 0 0 0 0 0 9409600 0 10312000 16147000 27960 2495 25530 235540;235541;235542;235543;235544;235545 187148;187149;187150;187151;187152;187153;187154 187150 6 LDNTVVGQTSWK Unmodified 1346.683 0.68302954 2604;2603 Q16512;Q16513 PKN1;PKN2 Serine/threonine-protein kinase N1;Serine/threonine-protein kinase N2 no no 0 0 0 By MS/MS 2 0 1 1 58.346 52.515 2 3.4611E-05 67537 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.69 81.333 59481000 0 59481000 0 0 0 0 0 0 0 0 0 0 0 0 0 27961 2603;2604 25531 235546 187155 187155 1 LDNTVVGQTSWKPISNQSWDQK Unmodified 2530.2452 0.24521567 2604 Q16513 PKN2 Serine/threonine-protein kinase N2 yes yes 0 0 1 By MS/MS By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 74.683 74.854 3 5.1402E-26 85915 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.201 82.569 35455000 0 0 0 0 0 0 0 4905700 0 10926000 0 0 2832600 2689100 14102000 27962 2604 25532 235547;235548;235549;235550;235551 187156;187157 187156 2 LDNVLLDSEGHIK Unmodified 1451.762 0.76200815 1443 P41743 PRKCI Protein kinase C iota type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.48 3.14 4 17 1 1 2 2 2 1 1 2 1 1 1 1 2 1 2 66.432 65.41 2;3 2.1543E-18 85288 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.65 88.787 869290000 27560000 385230000 53142000 28971000 25349000 35173000 0 29604000 19950000 36836000 38634000 39379000 39604000 37403000 72449000 27963 1443 25533 235552;235553;235554;235555;235556;235557;235558;235559;235560;235561;235562;235563;235564;235565;235566;235567;235568;235569;235570;235571;235572 187158;187159;187160;187161;187162;187163;187164;187165;187166;187167;187168;187169;187170;187171;187172;187173;187174;187175;187176;187177 187161 19 LDNVMLDSEGHIK Unmodified 1469.7184 0.71842877 1051 P17252;P05771 PRKCA;PRKCB Protein kinase C alpha type;Protein kinase C beta type yes no 0 0 0 By MS/MS 2 0 1 1 62.712 56.819 3 0.00019999 72844 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.933 40.277 37355000 0 37355000 0 0 0 0 0 0 0 0 0 0 0 0 0 27964 1051 25534 235573 187178 187178 1 LDNVPHTPSSYIETLPK Unmodified 1909.9785 0.97854286 4057 Q99733 NAP1L4 Nucleosome assembly protein 1-like 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 1 1 1 1 1 2 2 1 1 2 73.096 73.209 2;3 9.8403E-71 83475 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 168.42 159.36 883170000 0 0 0 21494000 28277000 53887000 25716000 45169000 34338000 54282000 120200000 146300000 50023000 84153000 219320000 27965 4057 25535 235574;235575;235576;235577;235578;235579;235580;235581;235582;235583;235584;235585;235586;235587;235588 187179;187180;187181;187182;187183;187184;187185;187186;187187 187185 7 LDPAASVTGSK Unmodified 1044.5451 0.54513908 1492 P46013 MKI67 Antigen KI-67 yes no 0 0 0 By MS/MS By matching By MS/MS By MS/MS 6 4 2 2 1 1 1 1 35.959 31.83 2 0.0004657 41527 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.97 63.652 188010000 0 183920000 4092800 0 0 0 0 0 0 0 0 0 0 0 0 27966 1492 25536 235589;235590;235591;235592 187188;187189;187190 187190 3 LDPADFSVGYVDR Unmodified 1452.6885 0.68850885 3753 Q96B70 LENG9 Leukocyte receptor cluster member 9 yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 79.184 79.234 2 0.039144 91602 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 32.254 20.54 14457000 0 0 0 0 1936400 0 0 0 0 0 5771000 0 0 0 6749700 27967 3753 25537 235593;235594;235595 187191 187191 1 LDPAVQQLK Unmodified 1010.576 0.57604528 99 Q6KB66;CON__Q6KB66-1 KRT80 Keratin, type II cytoskeletal 80 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.119 42.296 2 0.0057978 47277 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 76.774 47.673 + 320370000 0 0 0 78234000 15470000 13088000 13611000 49202000 12432000 26724000 23721000 34200000 30593000 14055000 9041300 27968 99 25538 235596;235597;235598;235599;235600;235601;235602;235603;235604;235605;235606;235607 187192;187193;187194;187195;187196;187197;187198;187199;187200;187201 187196 10 LDPEIVPEEK Unmodified 1167.6023 0.60231961 296 O43148 RNMT mRNA cap guanine-N7 methyltransferase yes yes 0 0 0 By MS/MS 2 0 1 1 58.16 52.329 2 0.022748 67479 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.263 68.303 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27969 296 25539 235608 187202 187202 1 LDPELHLDIK Unmodified 1191.6499 0.6499385 2206 Q12905 ILF2 Interleukin enhancer-binding factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 71.025 70.492 3 0.004114 80631 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 64.82 39.346 463240000 0 202980000 40523000 6937200 6937800 28525000 0 9590100 12520000 20974000 15284000 22665000 24790000 22261000 49257000 27970 2206 25540 235609;235610;235611;235612;235613;235614;235615;235616;235617;235618;235619;235620;235621 187203;187204;187205;187206;187207;187208;187209;187210;187211;187212;187213;187214;187215 187211 12 LDPETLESLGLIK Unmodified 1426.7919 0.79191129 3465 Q8NI27 THOC2 THO complex subunit 2 yes yes 0 0 0 By MS/MS 10 0 1 1 89.767 89.88 2 0.032355 104326 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 47.302 25.216 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27971 3465 25541 235622 187216 187216 1 LDPFADGGK Unmodified 918.4447 0.44469675 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.462 43.637 2 0.0051431 49124 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 82.279 55.112 379700000 0 0 0 20081000 20366000 27483000 21924000 22999000 22463000 22647000 33279000 50479000 44305000 36275000 57400000 27972 516 25542 235623;235624;235625;235626;235627;235628;235629;235630;235631;235632;235633;235634 187217;187218;187219;187220;187221;187222;187223;187224;187225;187226 187217 10 LDPFESSDPFSSSSVSSK Unmodified 1901.8531 0.85306758 4836 Q9UBC2 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 yes yes 0 0 0 By MS/MS By MS/MS 5 3.56 1 1 1 2 1 80.607 78.021 2 4.7055E-14 96186 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 139.77 128.51 151380000 0 141180000 0 0 0 0 0 0 0 0 0 0 0 0 10204000 27973 4836 25543 235635;235636;235637 187227;187228;187229;187230;187231 187227 5 LDPFQEVVLESSSVDELREK Unmodified 2318.1642 0.16417138 3903 Q96K76 USP47 Ubiquitin carboxyl-terminal hydrolase 47 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 95.827 89.351 3 1.0114E-71 113140 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 141.47 126.13 77585000 50515000 27070000 0 0 0 0 0 0 0 0 0 0 0 0 0 27974 3903 25544 235638;235639 187232;187233 187233 2 LDPGAVSDVPEAIK Unmodified 1409.7402 0.74021007 1455 P42356 PI4KA Phosphatidylinositol 4-kinase alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 69.352 69.415 2 0.027821 79773 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 45.764 28.252 41978000 0 0 0 3212500 2025400 4400300 2656100 2906800 2289000 3623200 5410200 6610700 3798400 0 5045200 27975 1455 25545 235640;235641;235642;235643;235644;235645;235646;235647;235648;235649;235650 187234 187234 0 LDPGLALGPGER Unmodified 1193.6404 0.64043645 4199 Q9BW19 KIFC1 Kinesin-like protein KIFC1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 63.082 63.375 2 0.0041779 72261 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 58.37 33.426 35108000 0 0 0 0 0 0 0 0 3325800 4375500 6562700 8786800 4240100 3279300 4537800 27976 4199 25546 235651;235652;235653;235654;235655;235656;235657;235658 187235;187236;187237;187238;187239;187240;187241 187241 7 LDPGLIMEQVK Unmodified 1241.669 0.66895938 5239 Q9Y5L4 TIMM13 Mitochondrial import inner membrane translocase subunit Tim13 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 80.704 80.46 2 0.0085907 99651 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.48 70.667 47072000 0 0 9877500 1010900 1743800 2746200 1207200 970120 0 0 5676200 5703200 0 0 18137000 27977 5239 25547 235659;235660;235661;235662;235663;235664;235665;235666;235667;235668 187242;187243;187244;187245 187242 4 LDPGSEETQTLVR Unmodified 1443.7205 0.72053726 1211 P26641 EEF1G Elongation factor 1-gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 50.075 50.086 2 1.8245E-26 55484 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 164.43 164.43 1867000000 0 0 0 127970000 114420000 375880000 145440000 146330000 119640000 238620000 334180000 0 0 264550000 0 27978 1211 25548 235669;235670;235671;235672;235673;235674;235675;235676;235677 187246;187247;187248;187249;187250;187251;187252;187253;187254;187255;187256 187254 10 LDPHLVLDQLR Unmodified 1317.7405 0.74048484 1356;1357 P35579;P35580 MYH9;MYH10 Myosin-9;Myosin-10 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 1 2 2 2 2 2 2 2 2 2 2 80.567 80.642 2;3 0.0012784 92804 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.17 73.412 1408300000 0 0 0 27429000 8951100 197760000 53568000 86595000 110520000 139530000 97001000 152550000 97549000 93618000 343220000 27979 1356;1357 25549 235678;235679;235680;235681;235682;235683;235684;235685;235686;235687;235688;235689;235690;235691;235692;235693;235694;235695;235696;235697;235698;235699;235700 187257;187258;187259;187260;187261;187262;187263;187264;187265;187266;187267;187268;187269;187270;187271;187272;187273;187274;187275 187263 11 LDPHNHVLYSNR Unmodified 1463.727 0.72696004 1313 P31948 STIP1 Stress-induced-phosphoprotein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 2 3 1 2 29.056 28.803 2;3 7.5375E-07 30616 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 107.09 74 415850000 12584000 0 0 0 0 0 0 0 0 0 122900000 100620000 0 0 179750000 27980 1313 25550 235701;235702;235703;235704;235705;235706;235707;235708;235709 187276;187277;187278;187279;187280;187281;187282;187283;187284;187285 187280 8 LDPNFLLK Unmodified 958.54877 0.54876789 4236 Q9BXW9 FANCD2 Fanconi anemia group D2 protein yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 78.076 78.15 2 0.010759 90623 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 78.616 50.509 55232000 0 0 0 13913000 0 5347100 3618700 0 0 5524200 5247800 5602500 4529500 5294200 6154900 27981 4236 25551 235710;235711;235712;235713;235714;235715;235716;235717;235718 187286;187287;187288 187288 3 LDPNVQK Unmodified 812.43922 0.43921744 2916 Q6P1J9 CDC73 Parafibromin yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 14.907 15.095 2 0.02459 14548 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 97.596 65.126 264180000 0 0 0 13812000 11755000 13882000 0 12142000 10791000 24275000 37423000 32472000 36375000 35502000 35752000 27982 2916 25552 235719;235720;235721;235722;235723;235724;235725;235726;235727;235728;235729 187289;187290;187291;187292;187293 187291 5 LDPPEDK Unmodified 812.3916 0.39159855 4690 Q9NW64 RBM22 Pre-mRNA-splicing factor RBM22 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 15.759 15.732 2 0.044016 15102 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 66.993 18.82 22707000 0 0 0 0 5593100 7135100 0 0 0 9979200 0 0 0 0 0 27983 4690 25553 235730;235731;235732 187294 187294 1 LDPPGGQFYNSK Unmodified 1321.6303 0.63026569 655 O95400 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 52.825 52.517 2 0.0027633 66094 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.914 55.66 133990000 0 80013000 0 0 0 26783000 1022800 0 2175500 3916700 4828200 3930300 3378100 2626300 5317700 27984 655 25554 235733;235734;235735;235736;235737;235738;235739;235740;235741;235742 187295;187296 187295 2 LDPQELAQK Unmodified 1040.5502 0.55022446 3745 Q96AY4 TTC28 Tetratricopeptide repeat protein 28 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 42.868 42.499 2 0.014237 47845 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 58.596 24.593 69498000 0 24511000 0 3281500 2687800 6842200 3967700 3694700 2832700 6114100 0 5971500 4582600 0 5012500 27985 3745 25555 235743;235744;235745;235746;235747;235748;235749;235750;235751;235752;235753 187297;187298;187299;187300 187297 4 LDPSIFESLQK Unmodified 1275.6711 0.67106787 5086 Q9Y265 RUVBL1 RuvB-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 6 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 83.419 82.076 2 1.9669E-05 95024 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 128.28 104.06 5148300000 100600000 3058000000 62296000 61408000 89935000 152100000 106610000 120030000 100990000 183220000 165870000 213720000 166270000 192660000 374690000 27986 5086 25556 235754;235755;235756;235757;235758;235759;235760;235761;235762;235763;235764;235765;235766;235767;235768;235769;235770;235771 187301;187302;187303;187304;187305;187306;187307;187308;187309;187310;187311;187312;187313;187314;187315;187316;187317;187318 187306 17 LDPSPQTIYK Unmodified 1160.6077 0.60773933 1974 P78344 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 2 1 1 1 1 2 1 1 48.439 48.611 2 0.0013256 54126 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 107.57 87.788 1573400000 0 0 0 82315000 118470000 129860000 110110000 133930000 120830000 143480000 149530000 195030000 115380000 110250000 164180000 27987 1974 25557 235772;235773;235774;235775;235776;235777;235778;235779;235780;235781;235782;235783;235784;235785 187319;187320;187321;187322;187323;187324;187325;187326;187327;187328;187329;187330;187331;187332 187328 13 LDPTQTSFLK Unmodified 1148.6077 0.60773933 5025 Q9UN36 NDRG2 Protein NDRG2 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 66.329 63.032 2 0.00033947 79904 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.33 76.458 26750000 0 19302000 0 7448100 0 0 0 0 0 0 0 0 0 0 0 27988 5025 25558 235786;235787 187333;187334;187335 187334 3 LDPVEQGQEDTVAPEVAAEK Unmodified 2124.0223 0.02225817 5078 Q9Y232 CDYL Chromodomain Y-like protein yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 62.44 62.528 2 6.7166E-28 70826 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 119.32 109.26 54997000 0 0 0 2432700 2516800 6359500 3735200 0 4750000 4830100 4960000 8026700 3848800 4991900 8545100 27989 5078 25559 235788;235789;235790;235791;235792;235793;235794;235795;235796;235797;235798 187336;187337;187338;187339;187340;187341;187342;187343;187344;187345 187338 10 LDPYDYEMIEVVLK Unmodified 1725.8535 0.85352527 1636 P50748 KNTC1 Kinetochore-associated protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 98.74 90.61 2 0.024808 116882 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.7 31.464 7398800 7398800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27990 1636 25560 235799 187346 187346 1 LDQAVLDLQR Unmodified 1169.6404 0.64043645 4387 Q9H3U1 UNC45A Protein unc-45 homolog A yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 62.895 62.976 2 0.0028825 72049 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 79.148 43.53 10164000 0 0 0 0 0 6127800 0 4035900 0 0 0 0 0 0 0 27991 4387 25561 235800;235801;235802;235803;235804;235805 187347;187348;187349;187350;187351 187347 5 LDQCPESPLQR Unmodified 1341.6347 0.63469914 2781 Q5T749 KPRP Keratinocyte proline-rich protein yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching 10 0 5 1 1 1 1 1 40.71 40.623 2 0.0014692 45805 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 78.939 50.73 27426000 0 0 0 15370000 2113500 0 2812400 0 0 2733100 0 0 4397100 0 0 27992 2781 25562 235806;235807;235808;235809;235810 187352 187352 1 LDQDINATK Unmodified 1016.5138 0.51383895 2555 Q15642 TRIP10 Cdc42-interacting protein 4 yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 19.418 19.815 2 0.04445 18986 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.442 16.749 14259000 0 0 0 0 0 0 8811100 0 0 0 0 2288300 0 0 3159600 27993 2555 25563 235811;235812;235813 187353 187353 1 LDQDLNEVK Unmodified 1072.5401 0.5400537 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 32.27 32.521 2 0.011113 35566 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 105.52 41.955 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27994 5071 25564 235814;235815;235816 187354;187355;187356 187355 3 LDQEDALLGSYPVDDGCR Unmodified 2021.9 0.90003454 4006 Q99426 TBCB Tubulin-folding cofactor B yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 76.249 76.31 2 1.4371E-37 87681 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 162.94 157.22 49969000 0 0 0 1704500 0 6697300 0 0 0 5096700 7729900 6717400 0 6771800 15251000 27995 4006 25565 235817;235818;235819;235820;235821;235822;235823 187357;187358;187359;187360;187361;187362 187359 6 LDQELAK Unmodified 815.43888 0.43888309 4732 Q9NXR8 ING3 Inhibitor of growth protein 3 yes yes 0 0 0 By MS/MS 2 0 1 1 20.042 16.467 2 0.031432 21705 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.369 23.232 37869000 0 37869000 0 0 0 0 0 0 0 0 0 0 0 0 0 27996 4732 25566 235824 187363;187364 187364 2 LDQEMEQLNHHTTTR Unmodified 1851.8534 0.85335912 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 31.323 31.51 3;4 5.9757E-27 33680 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 128.06 116.45 456700000 0 0 0 26076000 25895000 39051000 30266000 35612000 20249000 35079000 42429000 48895000 40338000 41443000 71371000 27997 3676 25567 235825;235826;235827;235828;235829;235830;235831;235832;235833;235834;235835;235836;235837;235838;235839;235840;235841;235842;235843;235844;235845;235846;235847;235848 187365;187366;187367;187368;187369;187370;187371;187372;187373;187374;187375;187376;187377;187378;187379;187380;187381;187382;187383;187384;187385 187380 20 LDQEMEQLNHHTTTR Oxidation (M) 1867.8483 0.84827374 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 2 17.79 17.951 3 0.00037338 17168 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 55.186 44.131 35892000 0 0 0 2380900 4128500 2926600 2950300 2630500 2495000 0 3881700 5535300 3740000 5223100 0 27998 3676 25567 235849;235850;235851;235852;235853;235854;235855;235856;235857;235858;235859 187386;187387 187387 5214 2 LDQEMEQLNHHTTTRTQMEMLTK Oxidation (M) 2830.3048 0.30479751 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 1 1 By MS/MS 2 0 1 1 56.69 48.509 4 0.0014512 66325 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 41.711 34.435 13649000 13649000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27999 3676 25568 235860 187388 187388 5214;5215;5216 1 LDQETLRAENK Unmodified 1315.6732 0.67319314 2337 Q13637 RAB32 Ras-related protein Rab-32 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.42 1.93 1 11 1 1 1 1 1 1 1 1 1 1 1 1 22.49 22.365 3 0.013191 27466 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 54.343 26.699 109480000 0 12219000 0 0 4174700 7969900 5719300 6027600 6345900 10663000 12725000 12422000 13063000 7615200 10532000 28000 2337 25569 235861;235862;235863;235864;235865;235866;235867;235868;235869;235870;235871;235872 187389;187390;187391;187392;187393;187394 187391 6 LDQEVAEVDK Unmodified 1144.5612 0.56118307 4063 Q99816 TSG101 Tumor susceptibility gene 101 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.565 31.752 2 0.00055023 34654 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 128.27 51.591 133940000 0 0 0 8051600 9862500 12354000 9361600 7373700 5453800 13004000 10486000 21039000 10613000 11734000 14610000 28001 4063 25570 235873;235874;235875;235876;235877;235878;235879;235880;235881;235882;235883;235884 187395;187396;187397;187398;187399;187400;187401;187402;187403;187404;187405;187406 187396 10 LDQEVEGGRGDEQYK Unmodified 1721.7857 0.78565671 4433 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24.055 23.531 3 2.1101E-20 24123 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.911 79.318 106320000 3900000 22888000 0 5385100 4717700 5924400 6553600 4341400 4208200 7571800 4491700 7716800 8295800 7468500 12860000 28002 4433 25571 235885;235886;235887;235888;235889;235890;235891;235892;235893;235894;235895;235896;235897;235898 187407;187408;187409;187410;187411;187412;187413;187414;187415;187416;187417;187418;187419;187420;187421 187411 15 LDQGGVIQDFINALDQLSNPELLFK Unmodified 2786.4491 0.44906043 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS 3 0 1 1 106.53 102.86 3 3.7743E-66 123674 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 128.29 122.03 10489000 0 10489000 0 0 0 0 0 0 0 0 0 0 0 0 0 28003 1986 25572 235899 187422 187422 1 LDQGNLHTSVSSAQGQDAAQSEEK Unmodified 2499.1474 0.14735212 4841 Q9UBG3 CRNN Cornulin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 36.457 36.643 3 9.3098E-12 40627 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 48.182 43.529 21169000 0 0 0 0 0 0 3063100 11038000 0 0 0 0 7067500 0 0 28004 4841 25573 235900;235901;235902 187423;187424;187425 187425 3 LDQILLNGNNITMLVPGGEGPEV Unmodified 2392.2308 0.23081116 5213 Q9Y4Y9 LSM5 U6 snRNA-associated Sm-like protein LSm5 yes yes 0 0 0 By MS/MS By MS/MS 1.5 0.5 1 1 1 1 102.45 102.71 2;3 0.0088658 92041 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 36.663 32.635 217170000 13357000 203810000 0 0 0 0 0 0 0 0 0 0 0 0 0 28005 5213 25574 235903;235904 187426;187427 187427 1 LDQIRQRESDITK Unmodified 1600.8533 0.85328277 1067 P17987 TCP1 T-complex protein 1 subunit alpha yes yes 0 0 2 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 3 1 1 32.965 27.911 3 2.8144E-07 38985 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 108.72 82.184 1117300000 1037300000 65151000 14844000 0 0 0 0 0 0 0 0 0 0 0 0 28006 1067 25575 235905;235906;235907;235908;235909 187428;187429;187430;187431 187430 1 LDQLDGSFDDPNTVVAK Unmodified 1832.8792 0.87922275 4937 Q9UJC3 HOOK1 Protein Hook homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 70.951 70.998 2 2.2169E-36 87157 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.59 67.751 51335000 0 0 0 3120100 2318200 6957700 3435500 3265700 2538500 5279500 4899100 0 5485700 5642700 8391800 28007 4937 25576 235910;235911;235912;235913;235914;235915;235916;235917;235918;235919;235920;235921 187432;187433;187434;187435;187436;187437;187438;187439;187440;187441;187442;187443;187444;187445;187446;187447 187436 16 LDQLIYIPLPDEK Unmodified 1555.8498 0.84976052 1755 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 90.343 90.481 2 0.0025616 105173 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 70.488 51.532 70964000 0 0 0 0 0 4032700 2329500 2515700 1691000 4871500 7687800 7548100 1459800 5465000 33363000 28008 1755 25577 235922;235923;235924;235925;235926;235927;235928;235929;235930;235931 187448;187449;187450;187451;187452;187453;187454 187454 7 LDQMDEDELERLK Unmodified 1632.7665 0.76650118 185 O14530 TXNDC9 Thioredoxin domain-containing protein 9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 5.57 3.85 3 1 3 1 2 1 1 1 1 66.235 63.18 3 0.0003668 77324 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 89.959 76.28 108690000 20339000 68675000 2724000 0 0 0 0 0 0 3711900 0 4367100 0 0 8876900 28009 185 25578 235932;235933;235934;235935;235936;235937;235938 187455;187456;187457;187458;187459 187457 5 LDQMDEDELERLK Oxidation (M) 1648.7614 0.7614158 185 O14530 TXNDC9 Thioredoxin domain-containing protein 9 yes yes 0 1 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 60.872 54.561 3 2.1633E-22 67153 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 146.79 135.17 72032000 15267000 56765000 0 0 0 0 0 0 0 0 0 0 0 0 0 28010 185 25578 235939;235940;235941 187460;187461;187462;187463 187461 254 3 LDQPANLLR Unmodified 1038.5822 0.58219329 329 O43432 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 56.669 56.8 2 0.0062061 63405 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.692 48.903 40240000 0 0 0 0 5537700 0 6160600 0 8935800 0 0 0 5090400 6219800 8295600 28011 329 25579 235942;235943;235944;235945;235946;235947;235948 187464;187465;187466 187464 3 LDQPDRFSFK Unmodified 1251.6248 0.62478638 2189 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 51.669 50.847 3 0.001614 57234 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 87.789 69.454 302600000 16864000 0 4565600 17752000 12040000 33837000 12618000 14770000 20432000 30781000 0 33003000 41929000 28183000 35821000 28012 2189 25580 235949;235950;235951;235952;235953;235954;235955;235956;235957;235958;235959;235960;235961 187467;187468;187469;187470;187471;187472;187473;187474;187475;187476;187477;187478;187479;187480;187481;187482;187483;187484;187485 187468 19 LDQPFIDCIRVAPDEK Unmodified 1914.9509 0.9509479 2685 Q4J6C6 PREPL Prolyl endopeptidase-like yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 82.294 77.625 3 0.00033988 94926 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 70.197 50.106 91734000 14040000 63866000 13828000 0 0 0 0 0 0 0 0 0 0 0 0 28013 2685 25581 235962;235963;235964;235965 187486;187487;187488;187489;187490 187490 5 LDQPGNLPGSNRR Unmodified 1422.7328 0.7327737 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.624 29.816 3 0.0010552 32201 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 67.879 54.476 215980000 0 0 0 12960000 11453000 12662000 13712000 13476000 15881000 19082000 22512000 23974000 23637000 16546000 30081000 28014 1492 25582 235966;235967;235968;235969;235970;235971;235972;235973;235974;235975;235976;235977 187491;187492;187493;187494;187495;187496;187497;187498;187499;187500;187501 187496 10 LDQPMTEIVSR Unmodified 1287.6493 0.64928657 1137 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 61.045 61.139 2 0.00022549 68933 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 109.42 66.82 20834000 0 0 0 1907400 0 0 0 0 0 0 5831400 8409600 0 4685900 0 28015 1137 25583 235978;235979;235980;235981;235982 187502;187503;187504;187505;187506;187507 187502 6 LDQPVSAPPSPR Unmodified 1262.6619 0.66190017 2598 Q16204 CCDC6 Coiled-coil domain-containing protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 40.747 40.91 2 0.0012935 45530 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 79.693 49.123 96275000 0 0 0 5018800 4049500 5501100 6443100 0 4556800 10298000 14269000 15752000 0 8545200 21842000 28016 2598 25584 235983;235984;235985;235986;235987;235988;235989;235990;235991;235992;235993 187508;187509;187510;187511;187512;187513;187514;187515;187516;187517 187515 10 LDQQTLPLGGR Unmodified 1196.6513 0.65133548 2025 P98175 RBM10 RNA-binding protein 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 2 1 1 1 52.716 52.866 2 2.9598E-05 58815 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 118.5 83.05 117250000 0 0 0 5094900 4519600 0 4736900 4798100 5076300 10240000 10758000 26317000 11295000 7076600 27333000 28017 2025 25585 235994;235995;235996;235997;235998;235999;236000;236001;236002;236003;236004;236005 187518;187519;187520;187521;187522;187523;187524;187525;187526;187527 187523 10 LDQSEIK Unmodified 831.4338 0.43379771 4258 Q9BZ29 DOCK9 Dedicator of cytokinesis protein 9 yes yes 0 0 0 By MS/MS 2 0 1 1 19.425 15.85 2 0.029852 20867 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.163 16.444 12712000 0 12712000 0 0 0 0 0 0 0 0 0 0 0 0 0 28018 4258 25586 236006 187528 187528 1 LDQTHLETVIPAPGK Unmodified 1617.8726 0.87262123 439 O60870 KIN DNA/RNA-binding protein KIN17 yes yes 0 0 0 By MS/MS 2 0 1 1 72.627 67.082 3 0.0011235 84660 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 59.864 49.01 60505000 0 60505000 0 0 0 0 0 0 0 0 0 0 0 0 0 28019 439 25587 236007 187529 187529 1 LDQTIARK Unmodified 943.54508 0.5450795 3688 Q92925 SMARCD2 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 yes yes 0 0 1 By MS/MS By matching By MS/MS 2 0 3 1 1 1 15.343 12.091 2 0.029205 17791 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 113.89 53.531 69212000 21601000 30147000 17465000 0 0 0 0 0 0 0 0 0 0 0 0 28020 3688 25588 236008;236009;236010 187530 187530 0 LDQTMGLSIR Oxidation (M) 1148.586 0.58595803 5278 Q9Y6D9 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 46.8 46.686 2 0.0017552 52689 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 81.338 47.249 31683000 0 0 0 3415100 4813800 6488000 6629600 0 3873000 6464000 0 0 0 0 0 28021 5278 25589 236011;236012;236013;236014;236015;236016 187531;187532;187533;187534 187532 6682 3 LDQTMSALK Unmodified 1005.5165 0.51648149 4809 Q9P270 SLAIN2 SLAIN motif-containing protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 42.185 37.089 2 0.0089039 48290 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.819 29.614 24013000 0 24013000 0 0 0 0 0 0 0 0 0 0 0 0 0 28022 4809 25590 236017 187535 187535 1 LDQVEQELNELR Unmodified 1484.7471 0.74708636 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 81.625 81.78 2 0.033028 94490 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 36.424 19.753 38129000 0 0 0 0 0 0 8677600 0 0 13973000 15478000 0 0 0 0 28023 5071 25591 236018;236019;236020 187536 187536 1 LDRLAYIAHPK Unmodified 1295.735 0.73500553 1529 P47914 RPL29 60S ribosomal protein L29 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 41.539 41.707 3 0.010169 45510 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 33.207 27.206 113720000 0 0 0 5371100 2407700 7370600 7239100 10725000 12090000 7371300 13833000 16391000 10968000 0 19954000 28024 1529 25592 236021;236022;236023;236024;236025;236026;236027;236028;236029;236030;236031 187537;187538;187539;187540 187539 4 LDSDGADLLTK Unmodified 1146.5768 0.57683314 2037 Q00536 CDK16 Cyclin-dependent kinase 16 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 51.813 51.954 2 0.0057959 58901 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 70.028 25.679 104640000 0 0 0 12040000 6879500 11154000 7581200 10197000 0 10087000 12116000 10572000 10128000 0 13884000 28025 2037 25593 236032;236033;236034;236035;236036;236037;236038;236039;236040;236041 187541;187542;187543 187542 2 LDSEADAEPQDLESTNLLESEAPR Unmodified 2628.2039 0.20386394 3918 Q96LD4 TRIM47 Tripartite motif-containing protein 47 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 79.191 79.204 3 0.018344 91546 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 21.022 14.147 21391000 0 0 0 0 3714500 3739300 0 0 0 4458300 0 0 0 0 9478800 28026 3918 25594 236042;236043;236044;236045 187544 187544 1 LDSEADAEPQDLESTNLLESEAPRDYFLK Unmodified 3294.5416 0.54157643 3918 Q96LD4 TRIM47 Tripartite motif-containing protein 47 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 90.222 84.935 3 5.0724E-30 108045 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.397 87.766 36240000 29934000 0 6306300 0 0 0 0 0 0 0 0 0 0 0 0 28027 3918 25595 236046;236047 187545;187546 187545 2 LDSEAWPGALDIEK Unmodified 1542.7566 0.75658842 2866 Q6AWC2 WWC2 Protein WWC2 yes yes 0 0 0 By MS/MS 2 0 1 1 84.664 79.92 2 0.0049186 99350 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.676 65.044 32346000 0 32346000 0 0 0 0 0 0 0 0 0 0 0 0 0 28028 2866 25596 236048 187547 187547 1 LDSELSALER Unmodified 1131.5772 0.57716749 3509 Q8TDY2 RB1CC1 RB1-inducible coiled-coil protein 1 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 59.269 59.542 2 0.046806 68087 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 38.086 13.164 6760900 0 0 0 0 0 2773800 0 0 0 0 0 3987100 0 0 0 28029 3509 25597 236049;236050 187548 187548 1 LDSELSALERQK Unmodified 1387.7307 0.73070802 3509 Q8TDY2 RB1CC1 RB1-inducible coiled-coil protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 57.717 52.869 3 0.0045886 66097 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 75.479 59.723 19852000 0 13665000 6186600 0 0 0 0 0 0 0 0 0 0 0 0 28030 3509 25598 236051;236052 187549 187549 0 LDSEQLPLRPK Unmodified 1294.7245 0.72450043 5236 Q9Y5K6 CD2AP CD2-associated protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 56.212 50.239 3 0.0057336 62996 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 70.675 59.092 55544000 8533600 30334000 16677000 0 0 0 0 0 0 0 0 0 0 0 0 28031 5236 25599 236053;236054;236055 187550 187550 0 LDSGDLLQQAQEIR Unmodified 1584.8107 0.81074925 2991 Q6XQN6 NAPRT Nicotinate phosphoribosyltransferase yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 78.163 78.307 2 1.2041E-177 90092 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 227.2 181.2 48886000 0 0 0 0 0 3228500 0 0 0 7881600 5960600 7006100 0 6384600 18425000 28032 2991 25600 236056;236057;236058;236059;236060;236061 187551;187552;187553;187554;187555 187552 5 LDSGDLLQQAQEIRK Unmodified 1712.9057 0.90571227 2991 Q6XQN6 NAPRT Nicotinate phosphoribosyltransferase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 72.39 72.45 3 1.5279E-28 82787 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 115.82 88.787 143620000 0 0 0 6616600 4018800 8068800 5663000 0 10937000 8485600 15461000 14287000 7860800 15895000 46330000 28033 2991 25601 236062;236063;236064;236065;236066;236067;236068;236069;236070;236071;236072 187556;187557;187558;187559;187560;187561;187562;187563;187564;187565;187566;187567;187568 187560 13 LDSGINMTTAGSDK Unmodified 1408.6504 0.65040879 5376 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 14 2 2 2 1 1 2 1 1 1 1 55.589 55.525 2 0.00095192 63505 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 62.303 34.098 + 68608000 0 0 0 5710900 9545700 10750000 4605400 0 10281000 7801300 7167300 0 7023200 5722900 0 28034 5376 25602 236073;236074;236075;236076;236077;236078;236079;236080;236081;236082;236083;236084;236085;236086 187569;187570;187571;187572;187573;187574 187574 6 LDSLADELK Unmodified 1002.5233 0.523341 4770 Q9NZJ4 SACS Sacsin yes yes 0 0 0 By MS/MS 2 0 1 1 62.757 56.864 2 0.0082307 72828 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.709 34.807 13882000 0 13882000 0 0 0 0 0 0 0 0 0 0 0 0 0 28035 4770 25603 236087 187575 187575 1 LDSLCLHQK Unmodified 1112.5648 0.56482866 3477 Q8TB03 CXorf38 Uncharacterized protein CXorf38 yes yes 0 0 0 By MS/MS 2 0 1 1 36.486 33.102 2 0.0074102 41848 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 95.741 56.079 6253500 0 0 6253500 0 0 0 0 0 0 0 0 0 0 0 0 28036 3477 25604 236088 187576;187577 187577 2 LDSLPPVIK Unmodified 980.59063 0.59063271 3447 Q8NFH4 NUP37 Nucleoporin Nup37 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 67.332 67.588 2 0.037292 76616 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.335 16.913 28922000 0 0 0 0 0 4448800 0 0 0 0 3946900 6832500 2800600 3582600 7310900 28037 3447 25605 236089;236090;236091;236092;236093;236094 187578 187578 1 LDSLQDIGMDHQALLK Oxidation (M) 1811.9087 0.90874874 1992 P80303 NUCB2 Nucleobindin-2;Nesfatin-1 yes yes 0 1 0 By MS/MS 2 0 1 1 77.885 73.11 3 0.0041628 91156 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 43.297 30.458 38972000 0 38972000 0 0 0 0 0 0 0 0 0 0 0 0 0 28038 1992 25606 236095 187579 187579 3245 1 LDSLQDIGMDHQALLK Unmodified 1795.9138 0.91383411 1992 P80303 NUCB2 Nucleobindin-2;Nesfatin-1 yes yes 0 0 0 By MS/MS 2 0 1 1 82.573 77.868 3 2.189E-05 96780 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.346 66.964 43034000 0 43034000 0 0 0 0 0 0 0 0 0 0 0 0 0 28039 1992 25606 236096 187580 187580 1 LDSLQTLNACCAVYGQK Unmodified 1939.9132 0.91318219 4001 Q96T76 MMS19 MMS19 nucleotide excision repair protein homolog yes yes 0 0 0 By MS/MS 2 0 2 2 76.022 71.082 2;3 2.1768E-57 88883 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 197.3 182.1 82334000 0 82334000 0 0 0 0 0 0 0 0 0 0 0 0 0 28040 4001 25607 236097;236098 187581;187582 187581 2 LDSPAGTALSPSGHTK Unmodified 1537.7736 0.77363546 1320 P32322 PYCR1 Pyrroline-5-carboxylate reductase 1, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 3 2 1 1 1 1 1 1 1 1 1 1 1 1 38.719 37.537 2;3 2.5859E-31 46344 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 105.53 93.167 403670000 0 279410000 18637000 5251500 4058800 7752600 6263200 7967600 3542400 9338000 13017000 11334000 10696000 8139200 18261000 28041 1320 25608 236099;236100;236101;236102;236103;236104;236105;236106;236107;236108;236109;236110;236111;236112;236113;236114;236115 187583;187584;187585;187586;187587;187588;187589;187590;187591;187592;187593;187594;187595;187596 187587 14 LDSPPPSPITEASEAAEAAEAGNLAVSSR Unmodified 2836.3727 0.37266061 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 89.385 89.539 3 1.5094E-06 103862 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 31.896 29.016 10740000 0 0 0 0 0 0 0 0 0 4551100 3317900 0 0 0 2871300 28042 4285 25609 236116;236117;236118 187597;187598;187599;187600 187599 4 LDSQRGAVIATELK Unmodified 1499.8308 0.83075641 278 O15371 EIF3D Eukaryotic translation initiation factor 3 subunit D yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 2 3 2 57.31 51.491 2;3 1.7036E-28 67005 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.45 82.09 578630000 131670000 247800000 199160000 0 0 0 0 0 0 0 0 0 0 0 0 28043 278 25610 236119;236120;236121;236122;236123;236124;236125 187601;187602;187603;187604;187605;187606;187607 187602 7 LDSSDIYNELK Unmodified 1295.6245 0.62451161 1243 P29144 TPP2 Tripeptidyl-peptidase 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.91 3.42 2 1 8 1 2 1 1 1 1 1 1 1 1 71.9 70.418 2 8.3981E-45 87256 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 208.63 177.94 805020000 10090000 754150000 0 1621400 0 2790400 1901300 2243200 0 0 5040500 7114500 0 5941700 14126000 28044 1243 25611 236126;236127;236128;236129;236130;236131;236132;236133;236134;236135;236136 187608;187609;187610;187611;187612;187613;187614;187615;187616;187617 187610 9 LDSSDSDSASGQGQVK Unmodified 1579.6962 0.696173 2609 Q16533 SNAPC1 snRNA-activating protein complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 13.12 13.359 2 2.0497E-19 12117 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 130.01 113.75 21079000 0 0 0 0 4476200 0 0 0 0 0 6059500 6952600 0 3590300 0 28045 2609 25612 236137;236138;236139;236140 187618;187619;187620;187621 187618 4 LDSSETTMVK Unmodified 1109.5274 0.5274401 4838 Q9UBE0 SAE1 SUMO-activating enzyme subunit 1;SUMO-activating enzyme subunit 1, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 29.561 28.207 2 0.0024043 30193 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.948 71.741 326890000 8438800 234100000 0 0 0 0 0 0 0 0 20472000 13233000 0 10814000 39831000 28046 4838 25613 236141;236142;236143;236144;236145;236146;236147 187622;187623;187624;187625;187626;187627;187628 187624 7 LDSSETTMVK Oxidation (M) 1125.5224 0.52235473 4838 Q9UBE0 SAE1 SUMO-activating enzyme subunit 1;SUMO-activating enzyme subunit 1, N-terminally processed yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.8 3.12 3 1 1 1 2 1 1 18.325 15.574 2 0.00029495 19877 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.33 99.558 134960000 28792000 89545000 2015400 0 0 0 0 0 0 0 0 0 0 0 14606000 28047 4838 25613 236148;236149;236150;236151;236152 187629;187630;187631;187632 187629 6207 4 LDSSIISEGK Unmodified 1047.5448 0.54480473 1273 P30260 CDC27 Cell division cycle protein 27 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.64 2.9 1 1 9 2 1 1 1 1 1 1 1 1 1 47.185 41.974 2 7.0502E-06 49081 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 158.37 99.584 337370000 0 337370000 0 0 0 0 0 0 0 0 0 0 0 0 0 28048 1273 25614 236153;236154;236155;236156;236157;236158;236159;236160;236161;236162;236163 187633;187634;187635;187636;187637;187638;187639;187640;187641;187642;187643 187641 11 LDSSPSVSSTLAAK Unmodified 1361.7038 0.70382456 2289 Q13428 TCOF1 Treacle protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46.799 45.947 2 7.6186E-24 57794 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 156.58 121.14 1150600000 9147700 408130000 0 0 33672000 60961000 44163000 62762000 42692000 83621000 87312000 85964000 82296000 55590000 94293000 28049 2289 25615 236164;236165;236166;236167;236168;236169;236170;236171;236172;236173;236174;236175;236176;236177 187644;187645;187646;187647;187648;187649;187650;187651;187652;187653;187654;187655;187656;187657 187648 13 LDSSPVSSPRK Unmodified 1171.6197 0.619701 392 O60293 ZFC3H1 Zinc finger C3H1 domain-containing protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.951 17.13 3 0.033754 17176 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 25.892 13.276 57836000 0 0 0 3303900 4089000 3719000 4674200 3918300 3940500 4704200 5440100 7187200 6597600 4566400 5696100 28050 392 25616 236178;236179;236180;236181;236182;236183;236184;236185;236186;236187;236188;236189 187658;187659 187658 1 LDSSRETSHGSPTVTK Unmodified 1700.8329 0.83294126 3463 Q8NI08 NCOA7 Nuclear receptor coactivator 7 yes yes 0 0 1 By MS/MS 2 0 1 1 14.845 12.54 3 0.003456 15880 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 51.147 32.072 4437400 0 0 4437400 0 0 0 0 0 0 0 0 0 0 0 0 28051 3463 25617 236190 187660 187660 1 LDSTDFTGTIK Unmodified 1196.5925 0.5924832 762 P02786 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.36 2.01 1 10 1 1 1 1 1 1 1 1 1 1 1 57.771 57.962 2 1.1363E-05 66037 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 138.08 103.91 305460000 0 0 0 0 26674000 29169000 27121000 22926000 23081000 33813000 33936000 45670000 29316000 0 33752000 28052 762 25618 236191;236192;236193;236194;236195;236196;236197;236198;236199;236200;236201 187661;187662;187663;187664;187665;187666;187667;187668;187669;187670;187671;187672;187673;187674;187675 187662 13 LDSTQLQQLHNQVLLEQHQLQNPPPSSPK Unmodified 3316.7164 0.71640194 3134 Q86TC9 MYPN Myopalladin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 79.128 79.308 4 6.7247E-22 91276 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.801 56.089 46230000 0 0 0 0 0 0 0 0 0 12174000 5359400 0 0 0 28697000 28053 3134 25619 236202;236203;236204 187676;187677 187677 2 LDSTQVGDFLGDSAR Unmodified 1579.7478 0.74781464 5276 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 75.232 75.276 2 0.00014404 86878 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 93.839 77.207 50949000 0 0 0 3714500 2950200 3992400 3968300 4420900 0 5600200 5952200 7760700 0 4025300 8564800 28054 5276 25620 236205;236206;236207;236208;236209;236210;236211;236212;236213;236214;236215 187678;187679;187680;187681;187682;187683;187684;187685;187686;187687;187688 187678 10 LDSVDMLLPSK Oxidation (M) 1232.6322 0.63223953 5100 Q9Y2H0 DLGAP4 Disks large-associated protein 4 yes yes 0 1 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 92.814 87.394 2 0.018308 109848 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.433 40.614 31692000 19147000 12545000 0 0 0 0 0 0 0 0 0 0 0 0 0 28055 5100 25621 236216;236217;236218 187689;187690 187689 6499 2 LDSVPVEEQEEFK Unmodified 1547.7355 0.73551862 4260 Q9BZD4 NUF2 Kinetochore protein Nuf2 yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 59.806 59.895 2 0.030515 68613 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 34.755 26.829 9974400 0 0 0 0 3327200 0 0 0 0 0 0 0 3014700 0 3632500 28056 4260 25622 236219;236220;236221 187691 187691 1 LDSVVVNSGK Unmodified 1016.5502 0.55022446 2433 Q14686 NCOA6 Nuclear receptor coactivator 6 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 1 2 1 29.571 29.773 2 0.0029978 32130 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 78.098 39.322 85613000 0 0 0 6177700 4130400 6154500 6781000 5788600 5879100 8514600 7006200 8950800 8443500 9527700 8258800 28057 2433 25623 236222;236223;236224;236225;236226;236227;236228;236229;236230;236231;236232;236233;236234 187692;187693;187694;187695;187696;187697;187698;187699;187700;187701;187702 187698 8 LDTAYDDLGNSGHFTIIYNQGFEIVLNDYK Unmodified 3434.6307 0.63066621 1722 P53634 CTSC Dipeptidyl peptidase 1;Dipeptidyl peptidase 1 exclusion domain chain;Dipeptidyl peptidase 1 heavy chain;Dipeptidyl peptidase 1 light chain yes yes 0 0 0 By MS/MS 3 0 1 1 97.465 93.953 3 0.0012685 97352 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 30.855 25.481 2394800 2394800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28058 1722 25624 236235 187703 187703 1 LDTDDLDEIEK Unmodified 1304.5984 0.59835644 4655;5016 Q9NUU7;Q9UMR2 DDX19A;DDX19B ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX19B no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 2 2 1 2 2 1 1 1 2 2 2 2 60.983 61.073 2 0.00091927 69198 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 90.827 71.733 184450000 0 0 0 15906000 10906000 12141000 14994000 14861000 3115300 7793000 10587000 27369000 19783000 16408000 30582000 28059 4655;5016 25625 236236;236237;236238;236239;236240;236241;236242;236243;236244;236245;236246;236247;236248;236249;236250;236251;236252;236253;236254;236255 187704;187705;187706;187707;187708;187709;187710;187711;187712;187713;187714;187715;187716 187707 12 LDTDISLIR Unmodified 1044.5815 0.58152458 3258 Q8IXH7 NELFCD Negative elongation factor C/D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.299 72.381 2 0.0032668 83382 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 93.143 59.14 29557000 0 0 0 0 0 16629000 0 12928000 0 0 0 0 0 0 0 28060 3258 25626 236256;236257;236258;236259;236260;236261;236262;236263;236264;236265;236266;236267 187717;187718;187719;187720;187721;187722;187723;187724;187725;187726;187727 187717 11 LDTDLAR Unmodified 802.41848 0.418482 5035 Q9UNL4 ING4 Inhibitor of growth protein 4 yes yes 0 0 0 By matching By MS/MS By matching 10 0 3 1 1 1 26.992 27.501 2 0.048847 28816 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.803 4.0154 16881000 0 0 0 0 0 0 0 0 0 1282400 0 5340100 0 0 10259000 28061 5035 25627 236268;236269;236270 187728 187728 1 LDTEAPYCGPSSYNQGQESGAGCGPGDVFPER Unmodified 3401.4201 0.42009786 2781 Q5T749 KPRP Keratinocyte proline-rich protein yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 75.721 75.538 3 2.8224E-21 87520 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 56.984 56.847 11110000 0 0 0 8497300 0 0 2612200 0 0 0 0 0 0 0 0 28062 2781 25628 236271;236272 187729;187730 187730 2 LDTEAPYCGPSSYNQGQESGAGCGPGDVFPERR Unmodified 3557.5212 0.52120889 2781 Q5T749 KPRP Keratinocyte proline-rich protein yes yes 0 0 1 By MS/MS 10 0 1 1 71.355 70.728 3 0.02708 82002 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 13.663 11.873 3416100 0 0 0 3416100 0 0 0 0 0 0 0 0 0 0 0 28063 2781 25629 236273 187731 187731 1 LDTETEGVPSTAIR Unmodified 1487.7468 0.74675201 1180 P24941 CDK2 Cyclin-dependent kinase 2 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 51.77 52.179 2 0.0039209 58489 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.836 43.601 22508000 0 0 0 0 0 5335000 0 3284400 0 0 0 6310600 0 0 7578200 28064 1180 25630 236274;236275;236276;236277 187732 187732 1 LDTFCGSPPYAAPELFQGK Unmodified 2096.9877 0.98772734 3040;4795;1216 Q7KZI7;P27448;Q9P0L2 MARK2;MARK3;MARK1 Serine/threonine-protein kinase MARK2;MAP/microtubule affinity-regulating kinase 3;Serine/threonine-protein kinase MARK1 no no 0 0 0 By MS/MS 10 0 1 1 85.378 85.546 2 0.00112 98840 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.211 38.444 4578800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4578800 28065 3040;1216;4795 25631 236278 187733 187733 1 LDTGPQSLSGK Unmodified 1101.5666 0.5666028 1351 P35269 GTF2F1 General transcription factor IIF subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.258 31.447 2 0.001856 34025 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 70.399 17.232 631280000 0 0 0 39257000 43768000 43607000 52412000 42851000 38848000 51146000 70517000 60871000 50751000 43776000 93481000 28066 1351 25632 236279;236280;236281;236282;236283;236284;236285;236286;236287;236288;236289;236290 187734;187735;187736;187737;187738;187739;187740;187741;187742;187743;187744;187745;187746 187744 8 LDTIFFAK Unmodified 953.52222 0.52221879 5235 Q9Y5K5 UCHL5 Ubiquitin carboxyl-terminal hydrolase isozyme L5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.083 77.178 2 0.0052431 88478 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.59 52.153 169850000 0 0 0 8633000 0 16495000 10620000 9443800 7882800 17119000 20041000 20939000 13859000 14348000 30474000 28067 5235 25633 236291;236292;236293;236294;236295;236296;236297;236298;236299;236300;236301;236302 187747;187748;187749;187750;187751;187752;187753;187754;187755;187756;187757;187758;187759 187750 12 LDTMAETNSISLNGPLR Oxidation (M) 1846.9095 0.90947702 3964 Q96R06 SPAG5 Sperm-associated antigen 5 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 72.566 72.664 2 0.00010088 84101 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 71.176 62.221 14468000 0 0 0 0 0 2904500 2949400 0 0 0 0 0 5796300 2818200 0 28068 3964 25634 236303;236304;236305;236306 187760;187761;187762 187762 5448 2 LDTPATSDPLSEEK Unmodified 1501.7148 0.71478318 3353 Q8N5U6 RNF10 RING finger protein 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 52.026 52.319 2 0.00093882 59499 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 62.408 43.165 50571000 0 0 0 0 0 4186700 5596500 3200000 2579000 5083100 5854200 7102100 4818600 4134500 8015900 28069 3353 25635 236307;236308;236309;236310;236311;236312;236313;236314;236315;236316;236317 187763;187764;187765;187766 187765 4 LDTPNSYGQGTPLTPR Unmodified 1715.8479 0.84786304 5057 Q9UPS6 SETD1B Histone-lysine N-methyltransferase SETD1B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.055 59.165 2 1.2043E-06 67359 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 94.191 78.652 67932000 0 0 0 2594300 2989700 2979600 3703300 5350000 3059600 6708500 8632300 8596100 9858100 5565800 7895300 28070 5057 25636 236318;236319;236320;236321;236322;236323;236324;236325;236326;236327;236328;236329 187767;187768;187769;187770;187771;187772;187773;187774;187775;187776;187777 187775 11 LDTSEVVFNSK Unmodified 1237.619 0.6190323 1530 P47929 LGALS7 Galectin-7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 56.004 56.076 2 7.1296E-37 63892 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 212.21 152.41 821280000 0 0 0 483500000 26251000 21429000 30890000 128490000 0 30452000 27940000 32625000 23452000 16241000 0 28071 1530 25637 236330;236331;236332;236333;236334;236335;236336;236337;236338;236339 187778;187779;187780;187781;187782;187783;187784;187785;187786;187787;187788 187782 10 LDTSQWPLLLK Unmodified 1312.7391 0.73908786 436 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 89.207 89.343 2 9.6225E-05 103466 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.87 81.785 27850000 0 0 0 0 0 3753200 0 3755600 3410500 0 0 3213500 0 3003400 10714000 28072 436 25638 236340;236341;236342;236343;236344;236345 187789;187790;187791;187792;187793 187791 3 LDTVQTLK Unmodified 916.52295 0.52294707 3343 Q8N5C6 SRBD1 S1 RNA-binding domain-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 38.052 33.085 2 0.015843 43174 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.195 32.224 27244000 0 27244000 0 0 0 0 0 0 0 0 0 0 0 0 0 28073 3343 25639 236346 187794;187795;187796 187796 3 LDTWTLK Unmodified 875.47527 0.4752686 2450 Q14814 MEF2D Myocyte-specific enhancer factor 2D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 56.623 56.769 2 0.025177 64508 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 81.297 30.331 18789000 0 0 0 0 0 0 3880200 10627000 4282200 0 0 0 0 0 0 28074 2450 25640 236347;236348;236349 187797 187797 1 LDVATDNFFQNPELYIRESVK Unmodified 2497.2489 0.24890406 3854 Q96GG9 DCUN1D1 DCN1-like protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 95.75 90.353 3 8.9156E-09 113709 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.325 66.236 32235000 12026000 20208000 0 0 0 0 0 0 0 0 0 0 0 0 0 28075 3854 25641 236350;236351;236352 187798;187799;187800 187798 3 LDVDAPR Unmodified 784.40792 0.40791731 3609 Q92503 SEC14L1 SEC14-like protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 29.231 29.484 2 0.023406 31996 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 86.866 47.648 508090000 0 0 0 29420000 0 37951000 36164000 0 32817000 58017000 55519000 77961000 56831000 46306000 77104000 28076 3609 25642 236353;236354;236355;236356;236357;236358;236359;236360;236361;236362 187801;187802;187803;187804;187805;187806;187807;187808 187802 7 LDVDAPRLLK Unmodified 1138.671 0.67100829 3609 Q92503 SEC14L1 SEC14-like protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 71.017 65.057 3 0.024204 86463 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.04 49.374 16790000 14666000 0 2123700 0 0 0 0 0 0 0 0 0 0 0 0 28077 3609 25643 236363;236364 187809 187809 1 LDVDRILDELDK Unmodified 1442.7617 0.76167379 4425 Q9H6T3 RPAP3 RNA polymerase II-associated protein 3 yes yes 0 0 1 By MS/MS 2 0 1 1 94.564 86.433 3 9.0453E-08 111795 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 119.01 84.33 32223000 32223000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28078 4425 25644 236365 187810 187810 1 LDVEMTFDK Oxidation (M) 1112.506 0.50597638 5341 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 2 1 2 2 2 17.165 17.382 2 0.010822 16886 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 56.547 33.504 + 30481000 0 0 0 1888400 1431400 0 3384800 2170700 0 0 7058800 0 0 5209800 9337700 28079 5341 25645 236366;236367;236368;236369;236370;236371;236372;236373;236374;236375;236376 187811;187812;187813;187814;187815;187816;187817 187815 6732 5 LDVFDMAEISIK Unmodified 1379.7007 0.70065344 5370 yes yes 0 0 0 By MS/MS 2 0 1 1 27.891 22.372 3 0.034337 31721 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 36.284 11.589 + 7373400 7373400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28080 5370 25646 236377 187818 187818 0 LDVFQSYQSATHEQTK Unmodified 1880.8905 0.89045614 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63.39 62.785 3 2.5474E-11 70819 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 82.349 78.445 184180000 0 27377000 7821600 6513200 8058700 11569000 9075700 12397000 9846300 17157000 16442000 19056000 12376000 9129900 17364000 28081 2291 25647 236378;236379;236380;236381;236382;236383;236384;236385;236386;236387;236388;236389;236390;236391 187819;187820;187821;187822;187823;187824;187825;187826;187827;187828;187829;187830;187831 187828 13 LDVGEAMAPPSHRK Oxidation (M) 1522.7562 0.75621126 3296 Q8IZL8 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 yes yes 0 1 1 By MS/MS 2 0 1 1 30 24.38 3 0.0045859 34005 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.115 25.904 18851000 18851000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28082 3296 25648 236392 187832 187832 4894 1 LDVGEAMAPPSHRK Unmodified 1506.7613 0.76129664 3296 Q8IZL8 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 47.613 39.898 3 0.0020055 55534 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.071 45.091 24214000 24214000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28083 3296 25648 236393 187833 187833 0 LDVGNAEVK Unmodified 943.49746 0.4974606 1660 P51572 BCAP31 B-cell receptor-associated protein 31 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 36.84 31.925 2 0.018298 36901 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 86.67 32.961 268250000 0 268250000 0 0 0 0 0 0 0 0 0 0 0 0 0 28084 1660 25649 236394;236395;236396;236397 187834;187835;187836;187837 187834 4 LDVGNAEVKLEEENR Unmodified 1713.8533 0.85334235 1660 P51572 BCAP31 B-cell receptor-associated protein 31 yes yes 0 0 1 By MS/MS 10 0 1 1 57.523 57.695 3 0.037843 65710 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 53.403 41.712 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28085 1660 25650 236398 187838 187838 1 LDVLESLIK Unmodified 1028.6118 0.61176208 2086 Q03001 DST Dystonin yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 91.708 88.024 2 0.033862 109557 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.42 15.665 7200000 0 6727100 472860 0 0 0 0 0 0 0 0 0 0 0 0 28086 2086 25651 236399;236400 187839 187839 1 LDVNSLTGEER Unmodified 1231.6044 0.60444487 2670 Q3L8U1 CHD9 Chromodomain-helicase-DNA-binding protein 9 yes yes 0 0 0 By MS/MS 10 0 1 1 55.832 55.17 2 0.039698 63413 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 51.276 19.973 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28087 2670 25652 236401 187840 187840 1 LDVNSNCVNEEQPEAEVGISQK Unmodified 2458.1282 0.12819658 3221 Q8IV38 ANKMY2 Ankyrin repeat and MYND domain-containing protein 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 62.713 62.669 3 0.00021772 70830 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 40.756 36.952 18043000 0 0 0 0 2086900 8505100 0 0 2482200 0 0 0 0 4968900 0 28088 3221 25653 236402;236403;236404;236405 187841;187842;187843 187843 3 LDVQFSGLTK Unmodified 1106.5972 0.59717465 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 72.502 71.338 2 4.733E-06 91131 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 145.89 87.291 3889700000 99220000 3038900000 44607000 27087000 29935000 54499000 37021000 37375000 31910000 59589000 81622000 90300000 42205000 66042000 149380000 28089 1124 25654 236406;236407;236408;236409;236410;236411;236412;236413;236414;236415;236416;236417;236418;236419;236420;236421 187844;187845;187846;187847;187848;187849;187850;187851;187852;187853;187854;187855;187856;187857;187858;187859 187852 15 LDVRDTAYPETNDAIPMISK Oxidation (M) 2264.0995 0.099462633 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 1 1 By MS/MS 2 0 1 1 76.732 71.894 3 2.4807E-05 89789 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 63.726 54.669 68343000 0 68343000 0 0 0 0 0 0 0 0 0 0 0 0 0 28090 5071 25655 236422 187860 187860 6441 1 LDVRDTAYPETNDAIPMISK Unmodified 2248.1045 0.10454801 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 81.042 77.048 2;3 8.2092E-12 95838 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.993 62.308 162640000 0 158600000 4032500 0 0 0 0 0 0 0 0 0 0 0 0 28091 5071 25655 236423;236424;236425 187861;187862;187863 187862 3 LDVSLPFVSR Unmodified 1131.6288 0.62880913 2427 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 86.26 86.343 2 0.005999 100110 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.692 46.905 35362000 0 0 0 1042300 0 2661200 1812600 2406400 0 4265300 3580000 5229400 2257500 3414200 8693500 28092 2427 25656 236426;236427;236428;236429;236430;236431;236432;236433;236434;236435 187864;187865;187866;187867;187868;187869 187864 6 LDVSNVATDTERLELK Unmodified 1801.9422 0.94215736 1638 P50851 LRBA Lipopolysaccharide-responsive and beige-like anchor protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 79.284 74.573 3 1.0882E-10 90239 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 87.932 71.794 206640000 18226000 180800000 7607700 0 0 0 0 0 0 0 0 0 0 0 0 28093 1638 25657 236436;236437;236438;236439 187870;187871;187872;187873;187874 187872 5 LDVTILSPSR Unmodified 1099.6237 0.62372375 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS 10 0 1 1 72.459 72.744 2 0.037846 83589 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 40.724 4.3901 22877000 0 0 0 0 0 0 0 0 0 0 0 22877000 0 0 0 28094 487 25658 236440 187875 187875 1 LDVTILSPSRK Unmodified 1227.7187 0.71868677 487 O75369 FLNB Filamin-B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.65 1.63 1 22 1 2 2 2 2 2 2 2 2 2 2 2 62.013 61.804 2;3 0.0056372 70278 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 43.897 22.501 185000000 13834000 0 0 7153200 0 14204000 6669100 7067300 5608100 11141000 21569000 23505000 11346000 21303000 41605000 28095 487 25659 236441;236442;236443;236444;236445;236446;236447;236448;236449;236450;236451;236452;236453;236454;236455;236456;236457;236458;236459;236460;236461;236462;236463 187876;187877;187878;187879;187880;187881 187879 5 LDVTLAK Unmodified 758.4538 0.45380487 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.7 3.52 2 1 7 1 2 1 1 1 1 1 1 1 44.972 43.414 2 0.021122 56194 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.63 5.3644 5401600000 209800000 4744400000 0 0 0 0 42355000 0 34671000 0 74187000 99760000 60859000 48837000 86690000 28096 1226 25660 236464;236465;236466;236467;236468;236469;236470;236471;236472;236473 187882;187883;187884;187885;187886;187887;187888;187889;187890 187885 9 LDVTLGDLTK Unmodified 1073.5968 0.5968403 276 O15357 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 79.059 75.488 2 0.00058735 93566 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.3 58.075 259930000 0 255030000 4898000 0 0 0 0 0 0 0 0 0 0 0 0 28097 276 25661 236474;236475;236476 187891;187892;187893;187894 187891 4 LDVTLGPVPEIGGSEAPAPQNK Unmodified 2188.1376 0.1375627 4066 Q99848 EBNA1BP2 Probable rRNA-processing protein EBP2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 83.21 83.283 3 7.8679E-10 96473 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 65.149 60.08 58764000 0 0 0 0 3273800 3146300 1437700 0 0 11503000 11800000 12906000 0 14697000 0 28098 4066 25662 236477;236478;236479;236480;236481;236482;236483 187895;187896;187897;187898;187899 187896 5 LDVTSVEDYK Unmodified 1167.5659 0.5659341 1548 P48643 CCT5 T-complex protein 1 subunit epsilon yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.85 3.88 1 5 2 12 3 4 1 1 1 1 1 1 1 1 1 1 1 1 1 61.349 59.922 2 7.202E-08 66265 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 152.34 131.04 8455600000 250990000 6585300000 18446000 76218000 97102000 182200000 134170000 87043000 68659000 150010000 165840000 139650000 98109000 158260000 243600000 28099 1548 25663 236484;236485;236486;236487;236488;236489;236490;236491;236492;236493;236494;236495;236496;236497;236498;236499;236500;236501;236502;236503 187900;187901;187902;187903;187904;187905;187906;187907;187908;187909;187910;187911;187912;187913;187914;187915;187916;187917;187918;187919;187920;187921 187902 22 LDVYTQWHQQSQSTK Unmodified 1847.8802 0.8802258 3581 Q8WX93 PALLD Palladin yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 50.906 51.335 3 8.8073E-38 56984 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 129.38 90.867 35883000 0 0 0 0 0 0 0 0 13073000 0 0 0 0 0 22810000 28100 3581 25664 236504;236505 187922;187923 187922 1 LDWELEQRK Unmodified 1215.6248 0.62478638 2343 Q13769 THOC5 THO complex subunit 5 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 51.185 51.169 3 0.0021831 56609 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.165 51.047 64511000 0 0 0 5427800 7630300 0 0 14989000 0 0 0 0 0 14886000 21577000 28101 2343 25665 236506;236507;236508;236509;236510;236511;236512;236513 187924;187925;187926;187927;187928;187929;187930;187931;187932 187926 9 LDWESFK Unmodified 923.43888 0.43888309 4871 Q9UEE9 CFDP1 Craniofacial development protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 75.498 71.604 2 0.029674 89592 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.407 31.693 28315000 0 26600000 1715000 0 0 0 0 0 0 0 0 0 0 0 0 28102 4871 25666 236514;236515 187933 187933 1 LDWESFKEEEGIGEELAIHNRGK Unmodified 2685.3035 0.30345883 4871 Q9UEE9 CFDP1 Craniofacial development protein 1 yes yes 0 0 2 By MS/MS 2 0 1 1 88.326 80.195 5 0.0090691 104406 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 13.475 5.9415 9978500 9978500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28103 4871 25667 236516 187934 187934 1 LDYDEDASAMLK Oxidation (M) 1385.6021 0.60206161 1625 P50502;Q8NFI4 ST13;ST13P5 Hsc70-interacting protein;Putative protein FAM10A5 yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.47 3.59 3 2 10 2 3 1 1 1 1 1 1 1 1 1 1 48.998 47.497 2 2.0629E-14 61688 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 142 130.04 664310000 41615000 401710000 0 0 0 8527000 8697900 10406000 7900300 18647000 30788000 32865000 14394000 25801000 62960000 28104 1625 25668 236517;236518;236519;236520;236521;236522;236523;236524;236525;236526;236527;236528;236529;236530;236531 187935;187936;187937;187938;187939;187940;187941;187942;187943;187944;187945;187946;187947;187948;187949;187950;187951;187952;187953;187954;187955;187956 187949 2605 22 LDYDEDASAMLK Unmodified 1369.6071 0.60714699 1625 P50502;Q8NFI4 ST13;ST13P5 Hsc70-interacting protein;Putative protein FAM10A5 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 67.044 65.704 2 0.00016732 84789 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.456 83.158 3085800000 90434000 2633000000 2939900 7709200 9165600 13411000 9910000 16074000 8219400 28064000 69236000 39355000 11991000 34275000 112030000 28105 1625 25668 236532;236533;236534;236535;236536;236537;236538;236539;236540;236541;236542;236543;236544;236545;236546;236547 187957;187958;187959;187960;187961;187962;187963;187964;187965 187962 9 LDYEEVGACQK Unmodified 1310.5813 0.58126659 398 O60343 TBC1D4 TBC1 domain family member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 40.92 40.428 2 3.9083E-05 49697 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 144.5 100.69 107380000 0 69807000 0 3780000 3372700 5483700 0 4124700 3884600 0 0 6228300 6623800 4075000 0 28106 398 25669 236548;236549;236550;236551;236552;236553;236554;236555;236556;236557;236558;236559 187966;187967;187968;187969;187970;187971;187972;187973;187974;187975;187976;187977;187978 187970 13 LDYELGRELVK Unmodified 1333.7242 0.72416608 4669 Q9NVI1 FANCI Fanconi anemia group I protein yes yes 0 0 1 By MS/MS 2 0 1 1 75.248 70.308 3 0.0038752 88001 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 55.452 32.226 45514000 0 45514000 0 0 0 0 0 0 0 0 0 0 0 0 0 28107 4669 25670 236560 187979 187979 1 LDYGQHVVAGTPGR Unmodified 1468.7423 0.74227576 1400 P38919 EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.991 41.169 3 7.7971E-05 45847 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 82.908 73.374 666720000 0 0 0 31086000 26578000 51826000 51575000 68895000 35843000 60387000 91468000 80349000 41123000 40389000 87203000 28108 1400 25671 236561;236562;236563;236564;236565;236566;236567;236568;236569;236570;236571;236572 187980;187981;187982;187983;187984;187985;187986;187987;187988;187989;187990;187991;187992;187993;187994;187995 187988 15 LDYILGLK Unmodified 933.55352 0.55351892 1511 P46781 RPS9 40S ribosomal protein S9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 79.137 78.081 2 0.0062194 90136 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 102.72 55.652 1995500000 71829000 355470000 62916000 55795000 73004000 122880000 76399000 100930000 98871000 160660000 119040000 164520000 148650000 158210000 226330000 28109 1511 25672 236573;236574;236575;236576;236577;236578;236579;236580;236581;236582;236583;236584;236585;236586;236587;236588;236589 187996;187997;187998;187999;188000;188001;188002;188003;188004;188005;188006;188007;188008;188009;188010 188008 15 LDYLGVSYGLTPR Unmodified 1452.7613 0.76127986 4319 Q9H0A0 NAT10 N-acetyltransferase 10 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 81.757 81.943 2 0.0010082 94442 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 79.659 27.169 7505200 0 0 0 0 0 0 0 4574400 2930800 0 0 0 0 0 0 28110 4319 25673 236590;236591 188011 188011 1 LDYNNIPTVVFSHPPIGTVGLTEDEAIHK Unmodified 3175.619 0.61897931 724 P00390 GSR Glutathione reductase, mitochondrial yes yes 0 0 0 By MS/MS 3 0 1 1 93.6 90.361 4 0.0018541 108324 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 31.111 26.058 4428000 0 4428000 0 0 0 0 0 0 0 0 0 0 0 0 0 28111 724 25674 236592 188012 188012 1 LEAAAQVR Unmodified 856.47667 0.47666558 1771 P55786;A6NEC2 NPEPPS;NPEPPSL1 Puromycin-sensitive aminopeptidase;Puromycin-sensitive aminopeptidase-like protein yes no 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 2 1 1 1 1 1 20.596 20.757 2 0.0068781 20307 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 92.677 38.151 135020000 0 0 0 14340000 11367000 1968800 8254500 8226600 27076000 12213000 19603000 0 4284300 12270000 15420000 28112 1771 25675 236593;236594;236595;236596;236597;236598;236599;236600;236601;236602;236603;236604 188013;188014;188015;188016 188015 4 LEAAHFDEK Unmodified 1058.5033 0.50327426 5294 Q9Y6V7 DDX49 Probable ATP-dependent RNA helicase DDX49 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.6 3.67 3 7 1 1 1 1 1 1 1 1 1 1 26.434 25.09 2 0.0052093 25288 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.219 55.22 35645000 3695600 4853900 7360000 4436600 0 2797600 2405100 0 0 2305100 2724000 0 0 0 5067000 28113 5294 25676 236605;236606;236607;236608;236609;236610;236611;236612;236613;236614 188017;188018;188019;188020;188021;188022;188023 188019 6 LEAAHTLEDCASR Unmodified 1471.6725 0.67254121 4321 Q9H0B6 KLC2 Kinesin light chain 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 33.505 33.69 2;3 2.2036E-32 37290 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 164.64 136.9 394780000 0 0 0 22473000 29073000 23126000 26760000 23681000 20265000 36123000 49773000 59781000 39721000 21998000 42003000 28114 4321 25677 236615;236616;236617;236618;236619;236620;236621;236622;236623;236624;236625;236626;236627;236628;236629;236630;236631;236632;236633;236634;236635;236636;236637;236638 188024;188025;188026;188027;188028;188029;188030;188031;188032;188033;188034;188035;188036;188037;188038;188039;188040;188041;188042 188042 8 LEAAIAEAEERGELALK Unmodified 1811.9629 0.9628928 69;88 CON__P08729;CON__Q3KNV1;P08729 KRT7 Keratin, type II cytoskeletal 7 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.12 3.79 4 1 3 2 2 1 1 1 1 79.22 76.145 3 2.3419E-18 87727 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.281 67.319 + 85140000 19013000 42607000 10211000 0 0 0 0 0 0 0 0 0 0 0 13310000 28115 69;88 25678 236639;236640;236641;236642;236643;236644;236645;236646 188043;188044;188045;188046;188047;188048;188049;188050 188044 8 LEAALGEAK Unmodified 900.49165 0.49164694 757 P02545 LMNA Prelamin-A/C;Lamin-A/C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.18 3.29 3 1 13 1 2 1 1 1 1 1 2 1 1 1 1 1 1 1 31.181 30.22 2 0.0033124 32490 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 93.429 19.812 4826900000 102690000 3550000000 24986000 120020000 36498000 66685000 52917000 104640000 36884000 89786000 115510000 114060000 85059000 113030000 214150000 28116 757 25679 236647;236648;236649;236650;236651;236652;236653;236654;236655;236656;236657;236658;236659;236660;236661;236662;236663 188051;188052;188053;188054;188055;188056;188057;188058;188059;188060;188061;188062;188063;188064;188065;188066;188067;188068;188069 188060 18 LEAAQNVLLCK Unmodified 1257.6751 0.67510739 4664 Q9NVC6 MED17 Mediator of RNA polymerase II transcription subunit 17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 59.968 59.641 2 0.00030956 67799 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 89.698 80.34 68722000 0 25240000 0 0 3330200 3883000 3158500 2358200 2165700 5746700 4163700 4267100 4448300 3767900 6192900 28117 4664 25680 236664;236665;236666;236667;236668;236669;236670;236671;236672;236673;236674;236675 188070;188071;188072;188073;188074;188075;188076;188077;188078;188079;188080;188081;188082;188083;188084;188085 188079 16 LEAASSALGGPTLTHAVTR Unmodified 1850.985 0.98502522 5061 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 62.014 62.216 3 0.0011264 70317 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.716 30.515 35696000 0 0 0 0 0 6828000 0 3439900 2562400 5874300 0 0 4915800 3762800 8312400 28118 5061 25681 236676;236677;236678;236679;236680;236681;236682 188086;188087;188088;188089;188090;188091 188088 4 LEAATQQNQQLR Unmodified 1398.7215 0.72154031 2156 Q08379 GOLGA2 Golgin subfamily A member 2 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 24.475 24.8 2 0.033062 25116 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 47.603 36.113 4772300 0 0 0 0 0 0 0 0 0 1383400 1754500 0 0 1634400 0 28119 2156 25682 236683;236684;236685 188092;188093 188093 2 LEAAVRIVPEWQDYDQEIK Unmodified 2301.1641 0.1641118 4751 Q9NYU2 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes yes 0 0 1 By MS/MS 2 0 1 1 88.877 80.746 3 6.6066E-68 105096 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 118.46 100.63 24172000 24172000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28120 4751 25683 236686 188094;188095 188095 2 LEAAYLDLQR Unmodified 1190.6295 0.62953741 482 O75347 TBCA Tubulin-specific chaperone A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 67.672 67.974 2 0.00088144 78029 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 118.18 62.167 89267000 0 0 0 0 0 0 0 0 0 0 28128000 38364000 0 22775000 0 28121 482 25684 236687;236688;236689 188096;188097;188098;188099 188097 3 LEACILTQGDK Unmodified 1246.6227 0.62273747 4669 Q9NVI1 FANCI Fanconi anemia group I protein yes yes 0 0 0 By MS/MS 2 0 1 1 58.097 52.266 2 1.3892E-06 67205 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.94 22.37 64537000 0 64537000 0 0 0 0 0 0 0 0 0 0 0 0 0 28122 4669 25685 236690 188100 188100 1 LEADFETDEK Unmodified 1195.5245 0.52446322 3086 Q7Z3T8 ZFYVE16 Zinc finger FYVE domain-containing protein 16 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 34.288 30.21 2;3 0.024838 49241 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 61.56 29.608 41904000 0 40524000 1380000 0 0 0 0 0 0 0 0 0 0 0 0 28123 3086 25686 236691;236692 188101;188102 188101 2 LEADLEK Unmodified 816.4229 0.42289868 1528 P47897 QARS Glutamine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 25.554 24.8 2 0.023356 26976 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 89.55 26.835 1137300000 37003000 862660000 0 16419000 13132000 29247000 0 17310000 0 30989000 36871000 39194000 28957000 25471000 0 28124 1528 25687 236693;236694;236695;236696;236697;236698;236699;236700;236701;236702;236703 188103;188104;188105;188106;188107 188107 5 LEADSLEVK Unmodified 1002.5233 0.523341 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 0 By MS/MS 2 0 1 1 47.55 41.987 2 0.011712 54634 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.743 14.218 12222000 0 12222000 0 0 0 0 0 0 0 0 0 0 0 0 0 28125 2495 25688 236704 188108 188108 1 LEADYDK Unmodified 852.38651 0.38651317 3683 Q92900 UPF1 Regulator of nonsense transcripts 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 17.711 14.172 2 0.03416 18450 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.265 24.907 50114000 0 50114000 0 0 0 0 0 0 0 0 0 0 0 0 0 28126 3683 25689 236705;236706 188109 188109 1 LEAEGMR Unmodified 804.37999 0.379988 3006 Q6ZRS2 SRCAP Helicase SRCAP yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 14.495 14.626 2 0.02563 14347 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 80.377 0 603860000 0 0 0 20788000 33446000 56254000 32056000 25759000 24799000 50237000 0 68783000 44752000 89366000 157620000 28127 3006 25690 236707;236708;236709;236710;236711;236712;236713;236714;236715;236716;236717 188110 188110 1 LEAEGVPEVSEK Unmodified 1285.6402 0.64016167 570 O76003 GLRX3 Glutaredoxin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 47.188 45.666 2 5.7249E-06 51937 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 110.46 78.523 1551000000 64991000 585880000 4280100 38894000 22877000 105750000 55108000 56061000 28780000 108400000 83682000 85267000 75543000 69642000 165840000 28128 570 25691 236718;236719;236720;236721;236722;236723;236724;236725;236726;236727;236728;236729;236730;236731;236732;236733;236734 188111;188112;188113;188114;188115;188116;188117;188118;188119;188120;188121;188122;188123;188124;188125;188126;188127;188128;188129;188130;188131;188132 188123 21 LEAEIATYR Unmodified 1064.5502 0.55022446 814 P05783 KRT18 Keratin, type I cytoskeletal 18 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.55 1 1 4 2 1 1 1 1 49.077 47.635 2 0.0016381 61303 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.48 88.76 706210000 0 62545000 0 0 0 0 0 0 0 0 0 175990000 105120000 102540000 260020000 28129 814 25692 236735;236736;236737;236738;236739;236740 188133;188134;188135;188136;188137 188133 5 LEAEIATYRR Unmodified 1220.6513 0.65133548 814 P05783 KRT18 Keratin, type I cytoskeletal 18 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.72 1.46 1 28 1 2 2 2 2 3 2 2 3 2 2 3 3 39.225 39.173 2;3 7.9147E-15 43433 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 180.44 103.16 3219200000 19571000 0 0 105040000 173930000 189870000 199130000 244520000 228770000 339340000 339730000 355740000 336470000 251210000 435840000 28130 814 25693 236741;236742;236743;236744;236745;236746;236747;236748;236749;236750;236751;236752;236753;236754;236755;236756;236757;236758;236759;236760;236761;236762;236763;236764;236765;236766;236767;236768;236769 188138;188139;188140;188141;188142;188143;188144;188145;188146;188147;188148;188149;188150;188151;188152;188153;188154;188155;188156;188157;188158;188159;188160;188161;188162;188163;188164;188165 188148 18 LEAEIATYRRLLEDGEDFNLGDALDSSNSMQTIQK Oxidation (M) 3957.8902 0.89020472 814 P05783 KRT18 Keratin, type I cytoskeletal 18 yes yes 0 1 2 By MS/MS 2 0 1 1 96.264 88.134 4 3.0509E-80 113853 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 115.44 96.572 58265000 58265000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28131 814 25694 236770 188166 188166 980 1 LEAEIATYRRLLEDGEDFNLGDALDSSNSMQTIQK Unmodified 3941.8953 0.8952901 814 P05783 KRT18 Keratin, type I cytoskeletal 18 yes yes 0 0 2 By MS/MS 2 0 1 1 96.948 88.817 4 1.4706E-118 114715 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 134.63 114.86 46670000 46670000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28132 814 25694 236771 188167 188167 1 LEAELGNMQGLVEDFK Oxidation (M) 1807.8662 0.86621522 67 CON__P05787;P05787 KRT8 Keratin, type II cytoskeletal 8 yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.53 3.67 9 1 22 2 6 2 2 2 2 2 1 2 2 2 2 2 1 2 78.995 78.097 2;3 1.9819E-113 90143 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 201.38 183.11 + 2720700000 34176000 1192700000 3951500 43174000 106780000 145710000 74637000 86349000 89771000 231080000 200470000 159800000 97443000 106970000 147670000 28133 67 25695 236772;236773;236774;236775;236776;236777;236778;236779;236780;236781;236782;236783;236784;236785;236786;236787;236788;236789;236790;236791;236792;236793;236794;236795;236796;236797;236798;236799;236800;236801;236802;236803 188168;188169;188170;188171;188172;188173;188174;188175;188176;188177;188178;188179;188180;188181;188182;188183;188184;188185;188186;188187;188188;188189 188170 76 20 LEAELGNMQGLVEDFK Unmodified 1791.8713 0.8713006 67 CON__P05787;P05787 KRT8 Keratin, type II cytoskeletal 8 yes no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.16 3.73 5 2 12 3 3 1 1 1 1 1 1 1 1 1 1 1 1 1 90.851 89.04 2;3 1.1139E-102 110803 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 215.02 191.42 + 1999900000 141420000 1620100000 2402900 2229900 7175600 6365900 4446000 14778000 9501900 58373000 29888000 15676000 3504900 13620000 70423000 28134 67 25695 236804;236805;236806;236807;236808;236809;236810;236811;236812;236813;236814;236815;236816;236817;236818;236819;236820;236821;236822 188190;188191;188192;188193;188194;188195;188196;188197;188198;188199;188200;188201;188202;188203;188204;188205;188206;188207;188208;188209;188210 188194 21 LEAELLQIEER Unmodified 1341.714 0.71399532 3714 Q969G3 SMARCE1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.782 76.791 2 0.00027754 88676 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 106.62 76.543 157310000 0 0 0 9471100 10468000 22864000 16208000 10870000 15788000 24718000 25981000 0 20936000 0 0 28135 3714 25696 236823;236824;236825;236826;236827;236828;236829;236830;236831;236832;236833;236834 188211;188212;188213;188214;188215;188216;188217;188218;188219;188220;188221 188211 11 LEAELLQIEERHQEK Unmodified 1863.969 0.96904081 3714 Q969G3 SMARCE1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 yes yes 0 0 1 By MS/MS 1.67 0.471 1 2 3 85.06 81.351 3;4 1.5843E-61 95580 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 167.61 130.06 60081000 60081000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28136 3714 25697 236835;236836;236837 188222;188223;188224;188225 188222 4 LEAERFENLR Unmodified 1275.6571 0.65714914 1580 P49591 SARS Serine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.618 47.781 3 0.0029441 52678 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.067 31.783 156750000 0 0 0 4821300 4940700 10836000 5057900 5242200 6932100 7863500 14507000 20596000 7299700 14754000 53904000 28137 1580 25698 236838;236839;236840;236841;236842;236843;236844;236845;236846;236847;236848;236849 188226;188227;188228 188226 3 LEAESLNISK Unmodified 1102.587 0.58700389 4515 Q9HCH0 NCKAP5L Nck-associated protein 5-like yes yes 0 0 0 By MS/MS 2 0 1 1 52.569 46.796 2 0.018886 60751 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.688 26.934 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28138 4515 25699 236850 188229 188229 1 LEAESMGFFTK Unmodified 1258.5904 0.59037471 4145 Q9BTE7 DCUN1D5 DCN1-like protein 5 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 6.71 3.81 2 1 4 1 2 1 1 1 1 76.23 74.853 2 0.0051581 93587 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.108 21.687 225320000 0 213150000 0 0 1856400 4089900 0 0 0 3513800 0 0 0 2710700 0 28139 4145 25700 236851;236852;236853;236854;236855;236856;236857 188230;188231;188232;188233 188231 2 LEAESMGFFTK Oxidation (M) 1274.5853 0.58528933 4145 Q9BTE7 DCUN1D5 DCN1-like protein 5 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 61.865 57.026 2 0.020877 70770 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 56.548 45.185 60773000 0 57263000 3510500 0 0 0 0 0 0 0 0 0 0 0 0 28140 4145 25700 236858;236859 188234 188234 1 LEAGDYADLVK Unmodified 1192.5976 0.59756858 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 68.66 66.78 2 0.00029757 76999 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 90.108 53.602 183770000 0 126370000 0 0 0 27531000 0 0 0 29862000 0 0 0 0 0 28141 2361 25701 236860;236861;236862;236863 188235;188236;188237;188238;188239 188236 5 LEAGTVTK Unmodified 817.45453 0.45453316 3116 Q7Z6K5 ARPIN Arpin yes yes 0 0 0 By matching By MS/MS 2.5 0.5 1 1 1 1 16.298 12.565 2 0.014574 16907 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.531 24.618 114020000 174190 113850000 0 0 0 0 0 0 0 0 0 0 0 0 0 28142 3116 25702 236864;236865 188240 188240 1 LEAHSDWVR Unmodified 1111.5411 0.54105675 1769 P55735 SEC13 Protein SEC13 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 32.975 33.281 2 0.009002 36430 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 67.993 34.196 52038000 0 0 0 0 0 4919600 0 5044600 0 5772200 11276000 0 7531400 3922800 13571000 28143 1769 25703 236866;236867;236868;236869;236870;236871;236872 188241;188242;188243;188244 188243 4 LEAIEDDSVK Unmodified 1117.5503 0.55028404 1741 P54578 USP14 Ubiquitin carboxyl-terminal hydrolase 14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.79 1 4 1 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 42.493 41.676 2 0.001444 41516 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 91.087 43.513 1687300000 110660000 1212500000 5207200 16384000 11044000 51925000 23427000 12047000 9952000 46899000 0 43376000 29790000 44781000 69357000 28144 1741 25704 236873;236874;236875;236876;236877;236878;236879;236880;236881;236882;236883;236884;236885;236886;236887;236888;236889;236890 188245;188246;188247;188248;188249;188250;188251;188252;188253;188254;188255;188256;188257;188258;188259;188260;188261;188262;188263;188264;188265 188245 19 LEALDANSR Unmodified 987.49852 0.49852324 885 P09496 CLTA Clathrin light chain A yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 27.68 28.022 2 0.014773 30215 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 57.96 21.565 2821300 0 0 0 0 0 0 0 0 0 0 0 0 2821300 0 0 28145 885 25705 236891;236892 188266;188267 188266 2 LEALDANSRK Unmodified 1115.5935 0.59348625 885 P09496 CLTA Clathrin light chain A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 19.447 19.694 2 0.016127 20328 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 87.308 28.062 78853000 0 0 0 0 4158300 6605400 3627700 0 0 0 15422000 15600000 0 10767000 22672000 28146 885 25706 236893;236894;236895;236896;236897;236898;236899 188268;188269;188270;188271;188272 188272 4 LEALFPDLPK Unmodified 1141.6383 0.63831118 3137 Q86TP1 PRUNE Protein prune homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 4 3.46 3 1 1 1 1 1 87.145 84.761 2 0.0027078 105742 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.65 101.65 178570000 0 156940000 7010500 0 0 0 0 0 0 0 0 0 0 0 14628000 28147 3137 25707 236900;236901;236902;236903 188273;188274;188275;188276 188273 4 LEALITQTR Unmodified 1043.5975 0.597509 4895 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.241 49.399 2 0.00089942 54715 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 143.73 72.392 1278400000 0 0 0 92233000 80188000 95603000 89370000 108480000 72347000 124510000 121040000 149210000 143510000 97545000 104350000 28148 4895 25708 236904;236905;236906;236907;236908;236909;236910;236911;236912;236913;236914;236915 188277;188278;188279;188280;188281;188282;188283;188284;188285;188286;188287;188288;188289;188290;188291;188292;188293 188287 17 LEALLEAAGIGK Unmodified 1183.6812 0.68123863 472;3250 Q8IWZ3;O75179 ANKHD1;ANKRD17 Ankyrin repeat and KH domain-containing protein 1;Ankyrin repeat domain-containing protein 17 no no 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.677 79.736 2 2.8065E-05 92557 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 98.943 61.751 165440000 0 0 0 7287600 8460700 10931000 8796300 12785000 10064000 15535000 15859000 22912000 14134000 14320000 24355000 28149 3250;472 25709 236916;236917;236918;236919;236920;236921;236922;236923;236924;236925;236926;236927 188294;188295;188296 188295 3 LEALMCTNPEIK Unmodified 1417.6945 0.69452221 3815 Q96EK7 FAM120B Constitutive coactivator of peroxisome proliferator-activated receptor gamma yes yes 0 0 0 By MS/MS 2 0 1 1 72.673 67.128 2 0.016936 84909 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.721 42.606 39379000 0 39379000 0 0 0 0 0 0 0 0 0 0 0 0 0 28150 3815 25710 236928 188297 188297 1 LEALNSAHQLDQLR Unmodified 1606.8427 0.84271808 3432 Q8NEY1 NAV1 Neuron navigator 1 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 60.954 61.345 3 0.01252 69267 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 30.332 19.979 9584900 0 0 0 0 0 0 0 0 0 0 0 0 0 4063700 5521100 28151 3432 25711 236929;236930 188298 188298 1 LEALRAEVSK Unmodified 1114.6346 0.63462279 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 39.649 34.593 2 0.0054504 48078 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 99.855 22.798 31116000 28165000 0 2950700 0 0 0 0 0 0 0 0 0 0 0 0 28152 2459 25712 236931;236932 188299 188299 0 LEALSVK Unmodified 758.4538 0.45380487 1480 P43487;Q9C010 RANBP1;PKIB Ran-specific GTPase-activating protein;cAMP-dependent protein kinase inhibitor beta yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.56 3.62 4 1 11 1 2 2 1 1 1 1 1 1 1 1 1 1 1 39.051 37.715 2 0.025165 41725 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 81.32 8.9658 7317300000 237410000 6174400000 122290000 0 13619000 17702000 19621000 16887000 11595000 23751000 111340000 146050000 23615000 70392000 328640000 28153 1480 25713 236933;236934;236935;236936;236937;236938;236939;236940;236941;236942;236943;236944;236945;236946;236947;236948 188300;188301;188302;188303;188304;188305;188306;188307 188306 8 LEAMCFDGVK Unmodified 1168.5257 0.52566596 1526 P47813 EIF1AX Eukaryotic translation initiation factor 1A, X-chromosomal yes yes 0 0 0 By MS/MS 10 0 1 1 63.08 63.653 2 0.014809 72040 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.473 37.436 6230600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6230600 28154 1526 25714 236949 188308 188308 1 LEAMTNSK Oxidation (M) 908.42733 0.42733213 1073 P18206 VCL Vinculin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 5.7795 5.861 2 0.0053449 3675 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 87.323 48.531 28134000 0 0 0 2223600 912290 4635900 2321500 0 1293900 3183900 0 3276200 2059800 0 8226900 28155 1073 25715 236950;236951;236952;236953;236954;236955;236956;236957;236958 188309;188310;188311;188312;188313 188310 1533 5 LEAMTNSK Unmodified 892.43242 0.43241751 1073 P18206 VCL Vinculin yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13.254 12.855 2 0.0010274 15668 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 156.4 67.667 422710000 31484000 331020000 0 5686100 2059800 5516500 2509400 2830900 1628200 5513100 9160700 6446800 2011000 4152900 12695000 28156 1073 25715 236959;236960;236961;236962;236963;236964;236965;236966;236967;236968;236969;236970;236971;236972 188314;188315;188316;188317;188318;188319;188320;188321 188315 8 LEANHGLLVAR Unmodified 1191.6724 0.67240528 3715 Q969G5 PRKCDBP Protein kinase C delta-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.247 42.424 3 0.00071054 46442 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 74.962 50.67 182250000 0 0 0 11311000 10904000 12238000 12258000 18793000 8492200 16479000 12142000 30839000 18318000 6714800 23757000 28157 3715 25716 236973;236974;236975;236976;236977;236978;236979;236980;236981;236982;236983;236984 188322;188323;188324;188325;188326;188327;188328;188329;188330 188329 7 LEAPLEELR Unmodified 1068.5815 0.58152458 2602 Q16401 PSMD5 26S proteasome non-ATPase regulatory subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.48 69.555 2 0.010961 79575 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 63.534 34.384 168820000 0 0 0 6493400 6822000 16592000 8505500 7379100 5820500 16338000 23221000 23532000 13959000 13579000 26581000 28158 2602 25717 236985;236986;236987;236988;236989;236990;236991;236992;236993;236994;236995;236996 188331;188332;188333;188334;188335;188336 188334 4 LEAQDSGEEAR Unmodified 1203.5368 0.53675924 3601 Q8WYP5 AHCTF1 Protein ELYS yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.542 11.707 2 0.0019204 10810 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 70.1 60.113 40537000 0 0 0 3708900 3804100 0 2595200 3052100 1889300 3774900 2775000 7360400 2729400 5120200 3727600 28159 3601 25718 236997;236998;236999;237000;237001;237002;237003;237004;237005;237006;237007 188337;188338;188339;188340;188341;188342 188338 6 LEAQETLNK Unmodified 1044.5451 0.54513908 158 O00461 GOLIM4 Golgi integral membrane protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 23.872 23.997 2 0.0021085 25382 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 139.88 84.437 76055000 0 0 0 6240200 4752900 0 8425000 6208200 5426000 9221300 11386000 0 14066000 10330000 0 28160 158 25719 237008;237009;237010;237011;237012;237013;237014;237015;237016 188343;188344;188345;188346;188347;188348;188349;188350;188351;188352 188348 9 LEAQLTENNIVK Unmodified 1370.7405 0.74054442 264 O15212 PFDN6 Prefoldin subunit 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.25 3.34 2 1 1 1 2 1 61.03 56.439 2;3 0.00023353 73716 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.113 58.558 2489800000 32973000 2355300000 0 0 0 0 0 0 0 0 0 0 0 0 101500000 28161 264 25720 237017;237018;237019;237020 188353;188354;188355;188356 188353 4 LEAQLVDLK Unmodified 1027.5914 0.59136099 4525 Q9HD26 GOPC Golgi-associated PDZ and coiled-coil motif-containing protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65.85 64.739 2 0.0039854 73090 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 97.635 54.389 303770000 12352000 193480000 4423600 4016800 3683300 9756100 5413200 4624100 3578900 9518800 12000000 10512000 7769000 7439900 15201000 28162 4525 25721 237021;237022;237023;237024;237025;237026;237027;237028;237029;237030;237031;237032;237033;237034;237035 188357;188358;188359;188360;188361;188362;188363;188364 188362 7 LEARLNVLEK Unmodified 1183.6925 0.69247202 1255 P29692 EEF1D Elongation factor 1-delta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.38 0.484 5 3 3 4 1 62.13 56.258 2;3 0.0003137 76487 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 112.36 44.341 2417000000 2192000000 173800000 51280000 0 0 0 0 0 0 0 0 0 0 0 0 28163 1255 25722 237036;237037;237038;237039;237040;237041;237042;237043 188365;188366;188367;188368;188369;188370;188371;188372;188373 188372 7 LEARQQEK Unmodified 1000.5302 0.53015772 3205 Q86Y91 KIF18B Kinesin-like protein KIF18B yes yes 0 0 1 By MS/MS 2 0 1 1 18.261 15.776 2 0.031929 20096 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 129.55 47.169 25593000 0 0 25593000 0 0 0 0 0 0 0 0 0 0 0 0 28164 3205 25723 237044 188374 188374 0 LEASELFK Unmodified 935.4964 0.49639797 367 O43795 MYO1B Unconventional myosin-Ib yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 63.205 63.372 2 0.0063839 72295 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 101.33 54.26 123770000 0 0 0 0 8657000 10612000 12067000 9721800 6046300 14098000 13329000 17790000 9734400 8646600 13064000 28165 367 25724 237045;237046;237047;237048;237049;237050;237051;237052;237053;237054;237055 188375;188376;188377;188378;188379;188380;188381;188382;188383;188384;188385 188380 10 LEASIER Unmodified 816.43413 0.43413207 4843 Q9UBI6 GNG12 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 24.965 25.189 2 0.023797 26465 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 84.097 28.494 462400000 0 0 0 0 0 0 0 10230000 0 441260000 0 0 10912000 0 0 28166 4843 25725 237056;237057;237058 188386;188387;188388 188388 3 LEATAASSVK Unmodified 975.52368 0.52367535 4577 Q9NQW6 ANLN Actin-binding protein anillin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.555 20.759 2 0.00076823 21354 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 120.12 85.311 269040000 0 0 0 19266000 17694000 16622000 14210000 15438000 12367000 21266000 30660000 48058000 16821000 19878000 36761000 28167 4577 25726 237059;237060;237061;237062;237063;237064;237065;237066;237067;237068;237069;237070 188389;188390;188391;188392;188393;188394;188395;188396;188397;188398;188399;188400;188401 188391 13 LEATINELV Unmodified 1000.5441 0.54407645 923 P10599 TXN Thioredoxin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.42 3.67 1 7 4 24 5 4 3 2 2 2 2 2 2 2 2 2 2 2 2 82.856 82.169 1;2 3.8733E-05 94381 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 150.84 114.96 10828000000 4053200000 3653900000 40828000 127170000 95353000 102230000 109290000 109700000 91948000 157330000 436510000 439280000 114610000 431890000 864490000 28168 923 25727 237071;237072;237073;237074;237075;237076;237077;237078;237079;237080;237081;237082;237083;237084;237085;237086;237087;237088;237089;237090;237091;237092;237093;237094;237095;237096;237097;237098;237099;237100;237101;237102;237103;237104;237105;237106 188402;188403;188404;188405;188406;188407;188408;188409;188410;188411;188412;188413;188414;188415;188416;188417;188418;188419;188420;188421;188422;188423;188424;188425 188410 17 LEATNRYHMPK Oxidation (M) 1374.6714 0.671419 384 O60231 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 yes yes 0 1 1 By MS/MS 2 0 1 1 18.858 14.273 3 0.021824 20879 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.352 16.819 18764000 18764000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28169 384 25728 237107 188426 188426 1 LEAVALR Unmodified 770.46504 0.46503826 2824 Q5VWJ9 SNX30 Sorting nexin-30 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 41.295 41.457 2 0.033387 46592 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 72.021 15.511 103130000 0 0 0 3914300 1696700 8044300 15183000 0 10907000 10904000 13214000 16222000 0 9277100 13761000 28170 2824 25729 237108;237109;237110;237111;237112;237113;237114;237115;237116;237117 188427 188427 1 LEAVDLMEPR Oxidation (M) 1187.5856 0.58562368 2120;3722 Q05BQ5;Q969R5 MBTD1;L3MBTL2 MBT domain-containing protein 1;Lethal(3)malignant brain tumor-like protein 2 no no 0 1 0 By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 54.678 54.641 2 0.0027173 61977 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 73.985 58.834 33794000 0 0 0 4810900 3857000 4663500 3732600 3366500 2577100 5188500 0 0 5597600 0 0 28171 2120;3722 25730 237118;237119;237120;237121;237122;237123;237124;237125 188428;188429;188430;188431;188432;188433;188434 188432 3425 7 LEAVDLMEPR Unmodified 1171.5907 0.59070906 2120;3722 Q05BQ5;Q969R5 MBTD1;L3MBTL2 MBT domain-containing protein 1;Lethal(3)malignant brain tumor-like protein 2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 71.242 71.138 2 0.010238 82110 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 65.305 29.867 9674600 0 0 0 2720300 0 0 0 0 0 0 0 0 3241100 3713200 0 28172 2120;3722 25730 237126;237127;237128;237129;237130 188435;188436;188437;188438 188438 4 LEAVQYK Unmodified 849.45962 0.45961853 742 P01040 CSTA Cystatin-A;Cystatin-A, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.484 27.681 2 0.023354 29407 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 89.673 33.163 4192700000 0 0 0 1268200000 211290000 207550000 192110000 340270000 111850000 230170000 343110000 561120000 243210000 221340000 262490000 28173 742 25731 237131;237132;237133;237134;237135;237136;237137;237138;237139;237140;237141;237142 188439;188440;188441;188442;188443;188444;188445;188446;188447;188448 188446 10 LEAVSHTSDMHR Unmodified 1381.6408 0.64084715 2055 Q01518 CAP1 Adenylyl cyclase-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.658 16.837 3 0.00025227 15198 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.295 58.064 108370000 0 0 0 2733600 1897000 9776500 4519300 3107500 2343800 6179200 9195100 13998000 6966500 10181000 37476000 28174 2055 25732 237143;237144;237145;237146;237147;237148;237149;237150;237151;237152;237153;237154 188449;188450;188451;188452;188453;188454;188455 188451 6 LEAYQHLFYLLQTNPTYLAK Unmodified 2425.2682 0.26818294 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS 3 0 1 1 97.27 93.962 3 0.0002589 112691 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 49.089 41 3423300 0 3423300 0 0 0 0 0 0 0 0 0 0 0 0 0 28175 1518 25733 237155 188456 188456 1 LECSEELGDLVK Unmodified 1390.665 0.66499622 2040;1723 P53675;Q00610 CLTCL1;CLTC Clathrin heavy chain 2;Clathrin heavy chain 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.79 1 4 1 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 72.365 71.284 2 1.4858E-27 79149 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 199.11 154.03 3718900000 219580000 2897000000 16138000 17557000 24629000 53538000 25059000 26450000 26508000 58294000 63587000 62054000 36547000 67411000 124540000 28176 1723;2040 25734 237156;237157;237158;237159;237160;237161;237162;237163;237164;237165;237166;237167;237168;237169;237170;237171;237172;237173 188457;188458;188459;188460;188461;188462;188463;188464;188465;188466;188467;188468;188469;188470;188471;188472;188473;188474;188475 188468 18 LEDAADVYR Unmodified 1050.4982 0.49818889 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 36.622 36.857 2 1.6273E-05 39978 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 153.04 112.93 4694500000 0 0 0 0 16696000 25362000 295060000 395830000 268590000 796850000 1223400000 1636700000 10656000 0 25311000 28177 4226 25735 237174;237175;237176;237177;237178;237179;237180;237181;237182;237183 188476;188477;188478;188479;188480;188481;188482;188483;188484;188485;188486;188487;188488 188486 13 LEDAADVYRGLQER Unmodified 1633.806 0.80599822 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 13 2 2 2 2 2 2 1 62.197 62.461 2;3 5.6727E-12 71093 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 85.42 51.735 630740000 0 0 0 0 0 0 29744000 47567000 34043000 96490000 160420000 258280000 0 0 4192300 28178 4226 25736 237184;237185;237186;237187;237188;237189;237190;237191;237192;237193;237194;237195;237196 188489;188490;188491;188492;188493;188494;188495;188496;188497;188498 188496 9 LEDAESSNPNLQSLLSTDALPSASK Unmodified 2586.2661 0.26607027 5091 Q9Y294 ASF1A Histone chaperone ASF1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.24 3.19 2 2 13 4 1 1 1 1 2 2 2 1 1 1 87.151 86.282 2;3 2.7069E-167 106039 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 265.27 249.09 509490000 0 404270000 0 0 5760200 7060700 0 6078400 5596300 18172000 14924000 14090000 4914800 6955500 21659000 28179 5091 25737 237197;237198;237199;237200;237201;237202;237203;237204;237205;237206;237207;237208;237209;237210;237211;237212;237213 188499;188500;188501;188502;188503;188504;188505;188506;188507;188508;188509;188510;188511;188512;188513;188514;188515 188504 17 LEDAGVR Unmodified 758.39227 0.39226725 979 P13489 RNH1 Ribonuclease inhibitor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 12.616 12.823 2 0.024897 11107 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.864 28.766 19410000 0 0 0 0 0 3236000 0 1668900 636790 3441100 0 2519000 2586900 0 5321100 28180 979 25738 237214;237215;237216;237217;237218;237219;237220 188516;188517 188517 2 LEDAMHTNYIR Oxidation (M) 1377.6347 0.63469914 5339 yes yes 0 1 0 By MS/MS By matching 10 0 3 2 1 35.976 36.137 2 0.0023576 40119 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 63.565 13.525 + 17050000 0 0 0 0 0 12552000 0 0 0 0 4497700 0 0 0 0 28181 5339 25739 237221;237222;237223 188518;188519 188518 6731 1 LEDANLPSLQK Unmodified 1226.6507 0.65066678 2837 Q5XPI4 RNF123 E3 ubiquitin-protein ligase RNF123 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 61.46 56.122 2 1.2095E-12 72030 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 157.99 97.021 45832000 0 45832000 0 0 0 0 0 0 0 0 0 0 0 0 0 28182 2837 25740 237224;237225 188520;188521;188522;188523 188523 4 LEDAYVFPGDGASHTK Unmodified 1705.7948 0.79476484 5218 Q9Y535 POLR3H DNA-directed RNA polymerase III subunit RPC8 yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 55.261 55.466 3 0.0027377 62016 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.917 23.259 46547000 0 0 0 0 3283100 3787900 3780500 0 2074800 4278200 5859600 4609300 3753500 4640700 10480000 28183 5218 25741 237226;237227;237228;237229;237230;237231;237232;237233;237234;237235 188524;188525;188526 188524 1 LEDEEARGSGGAGALPEAAR Unmodified 1954.9344 0.93444622 2278 Q13395 TARBP1 Probable methyltransferase TARBP1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 39.183 39.413 3 0.00035101 42795 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.786 17.83 58675000 0 0 0 0 2906600 11208000 5612300 0 0 10859000 0 11944000 6452600 0 9692600 28184 2278 25742 237236;237237;237238;237239;237240;237241;237242 188527;188528;188529;188530 188529 3 LEDELNR Unmodified 887.43486 0.43486035 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.953 23.159 2 0.018259 24541 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 118.69 38.309 890090000 0 0 0 171110000 50626000 47648000 46708000 142840000 33534000 56419000 60508000 89780000 105070000 46704000 39141000 28185 1029 25743 237243;237244;237245;237246;237247;237248;237249;237250;237251;237252;237253;237254 188531;188532;188533;188534;188535;188536;188537;188538 188532 5 LEDFFAR Unmodified 896.43922 0.43921744 947 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.883 63.974 2 0.024381 72162 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 82.913 60.291 650470000 0 0 0 21034000 18108000 56828000 30679000 27143000 39536000 37518000 80182000 74383000 30850000 62393000 171810000 28186 947 25744 237255;237256;237257;237258;237259;237260;237261;237262;237263;237264;237265;237266 188539;188540;188541;188542;188543;188544;188545 188543 5 LEDFLDNQR Unmodified 1148.5462 0.54620171 2604 Q16513 PKN2 Serine/threonine-protein kinase N2 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 56.298 56.429 2 0.0052437 64148 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 91.069 53.51 38879000 0 0 0 0 5114300 0 4429400 0 0 10014000 0 0 6844400 5329900 7147200 28187 2604 25745 237267;237268;237269;237270;237271;237272 188546;188547;188548;188549;188550 188549 5 LEDFRDYRR Unmodified 1268.6262 0.62618337 356;971;1359 O43707;P12814;P35609 ACTN4;ACTN1;ACTN2 Alpha-actinin-4;Alpha-actinin-1;Alpha-actinin-2 no no 0 0 2 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.216 33.4 3 0.029799 35484 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.688 49.816 474120000 0 0 0 13335000 4045000 32314000 821490 15377000 13772000 19812000 40750000 81264000 23047000 29235000 200350000 28188 356;971;1359 25746 237273;237274;237275;237276;237277;237278;237279;237280;237281;237282;237283;237284 188551 188551 0 LEDGDGINLNDIEK Unmodified 1543.7366 0.73658126 316 O43310 CTIF CBP80/20-dependent translation initiation factor yes yes 0 0 0 By MS/MS 2 0 1 1 74.926 69.829 2 2.0161E-18 87658 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.34 89.721 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28189 316 25747 237285 188552 188552 1 LEDGDIEEAPGAGGRR Unmodified 1640.7754 0.77542638 5260 Q9Y613 FHOD1 FH1/FH2 domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.702 33.886 3 2.5317E-28 37280 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 111.74 75.456 208740000 0 0 0 15083000 10447000 17236000 11938000 13517000 9407300 17442000 30719000 28291000 17530000 17740000 19389000 28190 5260 25748 237286;237287;237288;237289;237290;237291;237292;237293;237294;237295;237296;237297 188553;188554;188555;188556;188557;188558;188559;188560;188561;188562;188563;188564;188565;188566;188567;188568;188569;188570 188565 18 LEDGQTADGQTEEAAEPGEQLQTQK Unmodified 2672.2049 0.20492658 3848 Q96G46 DUS3L tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 44.958 45.441 3 0.046658 50834 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 17.216 14.454 18457000 0 0 0 0 0 0 0 0 0 0 5784700 7761600 0 4910800 0 28191 3848 25749 237298;237299;237300 188571 188571 1 LEDGTEFDSSLPQNQPFVFSLGTGQVIK Unmodified 3052.5029 0.5029465 1212 P26885 FKBP2 Peptidyl-prolyl cis-trans isomerase FKBP2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 97.259 93.234 3 5.1635E-11 115069 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.657 62.43 65372000 0 65372000 0 0 0 0 0 0 0 0 0 0 0 0 0 28192 1212 25750 237301;237302 188572;188573 188572 2 LEDHEYKPLDPK Unmodified 1482.7355 0.73545904 3249 Q8IWX8 CHERP Calcium homeostasis endoplasmic reticulum protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 29.979 30.162 3 0.014958 31239 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.581 27.415 159910000 0 0 0 11907000 8116100 0 12508000 10950000 11724000 13362000 0 21062000 21183000 18480000 30616000 28193 3249 25751 237303;237304;237305;237306;237307;237308;237309;237310;237311;237312 188574 188574 1 LEDHLLAGSCLK Unmodified 1354.6915 0.69148574 3078 Q7Z333 SETX Probable helicase senataxin yes yes 0 0 0 By MS/MS 2 0 1 1 63.063 57.17 3 0.021267 73446 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 30.023 20.573 14893000 0 14893000 0 0 0 0 0 0 0 0 0 0 0 0 0 28194 3078 25752 237313 188575 188575 1 LEDIANAALAASAVTQVAK Unmodified 1855.0051 0.005091963 3564 Q8WVM8 SCFD1 Sec1 family domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 4.43 3.54 4 1 2 3 2 1 1 89.032 86.078 2;3 1.8807E-51 106771 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 177.63 154.26 219090000 0 205990000 10949000 0 0 0 0 0 0 0 0 0 0 0 2146400 28195 3564 25753 237314;237315;237316;237317;237318;237319;237320 188576;188577;188578;188579;188580;188581 188577 6 LEDIFQQEFSTPSRK Unmodified 1823.9054 0.90537792 4400 Q9H4L4 SENP3 Sentrin-specific protease 3 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 75.246 75.1 3 4.2364E-06 86870 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 79.337 73.366 103520000 0 0 2393700 2543000 2638000 11368000 4110200 6237600 7636700 6554700 7826300 11252000 8732300 8475700 23749000 28196 4400 25754 237321;237322;237323;237324;237325;237326;237327;237328;237329;237330;237331;237332;237333 188582;188583;188584;188585;188586;188587;188588;188589;188590;188591;188592;188593;188594 188592 13 LEDILESINSIK Unmodified 1372.745 0.7449611 5147 Q9Y3A6 TMED5 Transmembrane emp24 domain-containing protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 86.142 86.258 2 2.621E-05 99729 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.616 65.889 15070000 0 0 0 0 0 2158200 0 0 2077300 2732200 0 0 1358400 2185500 4557900 28197 5147 25755 237334;237335;237336;237337;237338;237339 188595;188596;188597;188598;188599 188597 5 LEDLEAELADEEFLFGDVELSRHERQELK Unmodified 3458.6842 0.68415834 384 O60231 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 yes yes 0 0 2 By MS/MS 2.5 0.5 1 1 2 96.714 90.896 5 3.2069E-35 115281 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.441 92.584 106820000 106820000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28198 384 25756 237340;237341 188600;188601 188601 2 LEDLELK Unmodified 858.46985 0.46984887 2610 Q16537 PPP2R5E Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform yes yes 0 0 0 By MS/MS 10 0 1 1 49.655 49.82 2 0.029861 56351 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 75.269 0 8908300 0 0 0 0 0 0 0 8908300 0 0 0 0 0 0 0 28199 2610 25757 237342 188602 188602 1 LEDLEVIQHR Unmodified 1250.6619 0.66190017 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 51.35 51.466 3 0.0016816 58004 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 79.148 61.329 52042000 0 0 0 0 0 17487000 0 34555000 0 0 0 0 0 0 0 28200 2047 25758 237343;237344;237345 188603;188604;188605 188603 3 LEDLIVK Unmodified 828.49567 0.49566969 1177 P24752 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By matching 2 0 3 1 1 1 57.887 51.91 2 0.03062 67687 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.467 18.83 394370000 15234000 367460000 11673000 0 0 0 0 0 0 0 0 0 0 0 0 28201 1177 25759 237346;237347;237348 188606 188606 1 LEDLLQDAQDEK Unmodified 1415.678 0.67800374 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 2 62.416 62.477 2 3.2938E-08 71229 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 126.67 100.16 54010000 0 0 0 4342500 5094800 0 6608400 6830500 4257600 5681500 6298600 7751300 0 7144900 0 28202 2501 25760 237349;237350;237351;237352;237353;237354;237355;237356;237357;237358;237359 188607;188608;188609;188610;188611;188612;188613;188614;188615;188616 188614 10 LEDLLRK Unmodified 885.52837 0.5283668 973 P12956 XRCC6 X-ray repair cross-complementing protein 6 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36.498 35.614 2 0.023404 46310 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 148.21 52.158 1192800000 102760000 8795800 254470000 26544000 27929000 54158000 57292000 50702000 60089000 59192000 76530000 93299000 74610000 90962000 155470000 28203 973 25761 237360;237361;237362;237363;237364;237365;237366;237367;237368;237369;237370;237371;237372;237373;237374 188617;188618 188617 0 LEDLQQFQK Unmodified 1147.5873 0.58733824 5000 Q9ULM3 YEATS2 YEATS domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 52.439 49.271 2 0.00076164 63174 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 137.18 78.198 46958000 0 37670000 0 0 9288500 0 0 0 0 0 0 0 0 0 0 28204 5000 25762 237375;237376 188619;188620;188621 188619 3 LEDLSYLDGQR Unmodified 1307.6357 0.635745 4288 Q9C0D5 TANC1 Protein TANC1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 64.698 64.933 2 0.00034474 73657 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.496 48.144 47304000 0 0 0 0 0 4802200 5707200 5404600 0 7257700 0 12431000 0 0 11701000 28205 4288 25763 237377;237378;237379;237380;237381;237382 188622;188623;188624;188625;188626;188627 188625 5 LEDLVQESMEEK Unmodified 1448.6705 0.67047553 2086 Q03001 DST Dystonin yes yes 0 0 0 By MS/MS 2 0 1 1 66.476 60.559 2 1.3519E-14 77497 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 169.93 122.33 13397000 0 13397000 0 0 0 0 0 0 0 0 0 0 0 0 0 28206 2086 25764 237383 188628 188628 1 LEDLVSPPSIIDK Unmodified 1424.7763 0.77626123 3627 Q92570 NR4A3 Nuclear receptor subfamily 4 group A member 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 79.938 79.835 2 0.00090494 91802 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.355 41.241 24736000 0 0 0 5085000 0 0 0 0 0 0 0 0 0 0 19651000 28207 3627 25765 237384;237385;237386 188629;188630;188631 188630 3 LEDPTEVTPGLSFFNPVCATPNSK Unmodified 2619.2527 0.25266881 632 O95239;Q2VIQ3 KIF4A;KIF4B Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B yes no 0 0 0 By MS/MS 2.5 0.5 1 1 2 94.825 90.773 3 0.00018512 112782 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 50.271 43.055 32314000 0 32314000 0 0 0 0 0 0 0 0 0 0 0 0 0 28208 632 25766 237387;237388 188632 188632 1 LEDQNEYESR Unmodified 1281.5473 0.54732392 3995 Q96SU4 OSBPL9 Oxysterol-binding protein-related protein 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 18.876 18.772 2 2.5893E-08 22300 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 154.56 135.78 141430000 0 9885500 0 7555700 10005000 8501700 8588500 9166000 9807600 11906000 12803000 14038000 12045000 9123400 18003000 28209 3995 25767 237389;237390;237391;237392;237393;237394;237395;237396;237397;237398;237399;237400;237401 188633;188634;188635;188636;188637;188638;188639;188640;188641;188642;188643;188644;188645;188646 188637 14 LEDQNEYESRSLWK Unmodified 1795.8377 0.83769228 3995 Q96SU4 OSBPL9 Oxysterol-binding protein-related protein 9 yes yes 0 0 1 By MS/MS 2 0 1 1 57.625 53.798 3 0.032342 67100 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 38.799 20.203 3574000 0 0 3574000 0 0 0 0 0 0 0 0 0 0 0 0 28210 3995 25768 237402 188647 188647 1 LEDSEVR Unmodified 846.40831 0.40831125 3308 Q8N163 CCAR2 Cell cycle and apoptosis regulator protein 2 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 12.012 12.175 2 0.029029 11282 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 76.035 27.861 76254000 0 0 0 9612500 0 0 0 10854000 0 0 0 19032000 19373000 17383000 0 28211 3308 25769 237403;237404;237405;237406;237407 188648;188649 188649 2 LEDSEVRSVASNQSEMEFSSLQDMPK 2 Oxidation (M) 2974.3172 0.31719592 3308 Q8N163 CCAR2 Cell cycle and apoptosis regulator protein 2 yes yes 0 2 1 By MS/MS By matching 2.33 0.471 2 1 2 1 71.093 66.462 3 7.9119E-21 84580 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.829 86.339 24048000 0 19447000 4600900 0 0 0 0 0 0 0 0 0 0 0 0 28212 3308 25770 237408;237409;237410 188650;188651;188652 188650 4900;4901 3 LEDSEVRSVASNQSEMEFSSLQDMPK Oxidation (M) 2958.3223 0.32228129 3308 Q8N163 CCAR2 Cell cycle and apoptosis regulator protein 2 yes yes 0 1 1 By matching By MS/MS By MS/MS 2 0 4 1 2 1 77.662 72.524 3 5.968E-108 92666 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 151.66 146.04 102880000 6644000 93192000 3041100 0 0 0 0 0 0 0 0 0 0 0 0 28213 3308 25770 237411;237412;237413;237414 188653;188654 188654 4900;4901 2 LEDSSQKDEHLDIR Unmodified 1683.8064 0.80639216 2867 Q6BDS2 UHRF1BP1 UHRF1-binding protein 1 yes yes 0 0 1 By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 29.557 29.696 3 0.0012306 31720 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 54.598 42.683 31938000 0 0 0 2507600 2605500 0 3382200 0 0 0 4411400 12246000 6785600 0 0 28214 2867 25771 237415;237416;237417;237418;237419;237420;237421 188655;188656 188656 2 LEDSTRETQSQLETER Unmodified 1920.9025 0.90247738 1029 P15924 DSP Desmoplakin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.411 30.6 3 1.6244E-07 32922 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 84.859 45.35 584320000 0 0 0 108090000 26955000 30362000 30605000 76852000 33099000 32503000 42106000 63183000 85562000 26519000 28481000 28215 1029 25772 237422;237423;237424;237425;237426;237427;237428;237429;237430;237431;237432;237433 188657;188658;188659;188660;188661;188662;188663;188664;188665;188666;188667;188668;188669 188666 13 LEDSYRFQFFQRDAEELEK Unmodified 2449.155 0.15500368 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 2 By MS/MS 2 0 1 1 86.204 78.074 4 0.0089391 101852 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 33.142 24.433 7611700 7611700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28216 2344 25773 237434 188670 188670 1 LEDTENWLYEDGEDQPK Unmodified 2079.8909 0.89090965 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.06 3.7 4 3 11 2 5 1 1 1 1 2 1 2 2 73.447 71.631 2;3 3.5405E-163 89045 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 289.37 287.36 885570000 45061000 715050000 0 0 2086200 3637800 2561100 0 0 4839000 19484000 12269000 0 19110000 61473000 28217 1337 25774 237435;237436;237437;237438;237439;237440;237441;237442;237443;237444;237445;237446;237447;237448;237449;237450;237451;237452 188671;188672;188673;188674;188675;188676;188677;188678;188679;188680;188681;188682;188683;188684;188685;188686 188676 14 LEDTHFVQCPSVPGHK Unmodified 1849.8781 0.87811731 3213 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 47.062 47.806 4 0.018653 53361 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 19.669 0 10341000 0 0 0 0 0 0 0 0 0 0 0 10341000 0 0 0 28218 3213 25775 237453 188687 188687 1 LEDTHFVQCPSVPSHK Unmodified 1879.8887 0.888682 3108;4346 Q7Z5L9;Q9H1B7 IRF2BP2;IRF2BPL Interferon regulatory factor 2-binding protein 2;Interferon regulatory factor 2-binding protein-like no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 2 1 1 2 2 2 2 2 2 1 1 1 46.558 46.723 3;4 3.8972E-05 52468 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 64.476 57.418 209780000 0 0 0 13168000 6823100 12608000 17264000 14274000 14077000 16576000 28631000 27085000 15044000 14399000 29833000 28219 3108;4346 25776 237454;237455;237456;237457;237458;237459;237460;237461;237462;237463;237464;237465;237466;237467;237468;237469;237470;237471;237472 188688;188689;188690;188691 188688 4 LEDTITLIK Unmodified 1044.6067 0.6066767 423 O60678 PRMT3 Protein arginine N-methyltransferase 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 71.055 69.882 2 0.00051001 88584 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.08 29.818 462230000 15959000 328750000 12561000 5577100 6389300 7898900 7560900 6140000 5152800 12534000 12633000 11930000 6497700 7338900 15309000 28220 423 25777 237473;237474;237475;237476;237477;237478;237479;237480;237481;237482;237483;237484;237485;237486;237487;237488 188692;188693;188694;188695;188696;188697;188698;188699;188700 188693 6 LEDTYFDRDVEK Unmodified 1528.7046 0.70455285 2057 Q01581 HMGCS1 Hydroxymethylglutaryl-CoA synthase, cytoplasmic yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 5.09 3.73 5 2 4 2 4 1 1 1 1 1 53.087 49.423 2;3 3.3577E-07 61294 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 116.01 96.271 312410000 81061000 152430000 8623900 0 12721000 0 0 0 0 0 12847000 15580000 0 0 29154000 28221 2057 25778 237489;237490;237491;237492;237493;237494;237495;237496;237497;237498;237499 188701;188702;188703;188704;188705;188706;188707;188708;188709;188710;188711;188712 188705 11 LEDVLPLAFTR Unmodified 1272.7078 0.70778773 2757 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 88.136 88.206 2 0.0038839 102227 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 62.823 47.161 47686000 0 0 0 1257400 2408400 4422900 1749700 3351800 3094900 6281400 4318600 5120400 3758500 3358500 8564100 28222 2757 25779 237500;237501;237502;237503;237504;237505;237506;237507;237508;237509;237510;237511 188713;188714;188715;188716;188717;188718;188719;188720;188721;188722;188723;188724 188713 11 LEDVNALTNIK Unmodified 1228.6663 0.66631685 4932 Q9UIY3 RWDD2A RWD domain-containing protein 2A yes yes 0 0 0 By MS/MS 2 0 1 1 70.8 64.983 2 0.00045337 82612 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.98 53.259 31488000 0 31488000 0 0 0 0 0 0 0 0 0 0 0 0 0 28223 4932 25780 237512 188725;188726 188725 2 LEDYQQK Unmodified 922.43961 0.43961137 2184 Q12769 NUP160 Nuclear pore complex protein Nup160 yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 12.173 9.3938 2 0.013186 12514 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.98 31.394 45252000 0 43907000 1345200 0 0 0 0 0 0 0 0 0 0 0 0 28224 2184 25781 237513;237514 188727 188727 1 LEEAASRAAEEEK Unmodified 1431.6842 0.68415175 4890 Q9UH65 SWAP70 Switch-associated protein 70 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 21.012 17.242 2 3.56E-20 22800 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.75 38.583 16721000 0 16721000 0 0 0 0 0 0 0 0 0 0 0 0 0 28225 4890 25782 237515;237516 188728 188728 1 LEEAILGSIGAR Unmodified 1227.6823 0.68230126 3933 Q96N67 DOCK7 Dedicator of cytokinesis protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.065 74.984 2 0.00033522 86677 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 81.865 33.069 23565000 0 0 0 1876800 4609600 0 5973600 0 0 5199100 5905600 0 0 0 0 28226 3933 25783 237517;237518;237519;237520;237521;237522;237523;237524;237525;237526;237527;237528 188729;188730;188731;188732;188733;188734;188735;188736;188737;188738;188739 188739 10 LEEAMSELTMPSSVLK Oxidation (M) 1779.8634 0.86343803 5003 Q9ULT0 TTC7A Tetratricopeptide repeat protein 7A yes yes 0 1 0 By MS/MS By MS/MS By matching 2.25 0.433 3 1 1 2 1 57.889 52.203 2;3 0.0024342 67576 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 48.704 33.069 225010000 8826500 213350000 2830400 0 0 0 0 0 0 0 0 0 0 0 0 28227 5003 25784 237529;237530;237531;237532 188740;188741;188742 188742 6346;6347 3 LEEANGNTQMVEK Unmodified 1461.677 0.67695789 601 O94906 PRPF6 Pre-mRNA-processing factor 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.769 27.967 2 3.1835E-13 30042 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 164.64 69.14 145920000 0 0 0 8127100 9666000 10929000 6338300 11199000 7585700 14380000 17786000 17273000 12011000 14127000 16498000 28228 601 25785 237533;237534;237535;237536;237537;237538;237539;237540;237541;237542;237543;237544 188743;188744;188745;188746;188747;188748;188749;188750;188751;188752;188753 188744 11 LEEANGNTQMVEK Oxidation (M) 1477.6719 0.67187251 601 O94906 PRPF6 Pre-mRNA-processing factor 6 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 17.01 17.264 2 0.00039116 17323 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.655 22.972 41340000 0 0 0 0 0 2229000 3122600 2923000 2997400 2975200 4521000 10664000 4955600 3577200 3375700 28229 601 25785 237545;237546;237547;237548;237549;237550;237551;237552;237553;237554 188754;188755;188756;188757 188757 749 3 LEEAQSEAPETK Unmodified 1330.6252 0.62523989 3309 Q8N196 SIX5 Homeobox protein SIX5 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 18.886 18.939 2 0.0055203 19451 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 68.557 42.174 6069200 0 0 0 0 1469300 1588200 0 1147700 0 0 0 0 0 1863900 0 28230 3309 25786 237555;237556;237557;237558 188758 188758 1 LEEDAEMK Unmodified 963.42191 0.4219124 811 P05455 SSB Lupus La protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 18.697 18.914 2 0.0067419 17873 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.299 85.311 135060000 0 0 0 5108400 4638500 7864400 0 6291600 6962400 8823200 15774000 16138000 13311000 12822000 37329000 28231 811 25787 237559;237560;237561;237562;237563;237564;237565;237566;237567;237568;237569 188759;188760;188761;188762;188763;188764;188765;188766;188767;188768;188769;188770;188771 188761 13 LEEDAEMK Oxidation (M) 979.41683 0.41682702 811 P05455 SSB Lupus La protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.08 3.52 1 2 10 2 1 1 1 1 1 1 1 1 1 1 1 15.757 15.763 2 0.0049175 5562 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.55 62.588 160620000 61435000 33047000 0 0 0 2523600 2276000 1914800 4085200 3647200 14744000 10403000 7776400 6878700 11889000 28232 811 25787 237570;237571;237572;237573;237574;237575;237576;237577;237578;237579;237580;237581;237582 188772;188773;188774;188775;188776;188777;188778;188779;188780;188781;188782;188783 188775 972 12 LEEDGGCVIGGDR Unmodified 1375.6038 0.60379294 3893 Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 37.486 37.676 2 0.0010494 41657 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 77.64 47.076 37526000 0 0 0 0 2019700 3896900 2734800 2605000 1916800 4956700 3141700 0 5286500 4628000 6339900 28233 3893 25788 237583;237584;237585;237586;237587;237588;237589;237590;237591;237592 188784;188785;188786;188787;188788;188789;188790;188791;188792;188793 188792 10 LEEDGGCVIGGDRSLQDK Unmodified 1946.9004 0.90036889 3893 Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 49.493 44.605 3 2.13E-05 55454 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 73.166 55.249 3359700 0 3359700 0 0 0 0 0 0 0 0 0 0 0 0 0 28234 3893 25789 237593;237594 188794;188795;188796;188797 188796 4 LEEDINSSMTNSTAASRPPVTLR Oxidation (M) 2504.2177 0.21768029 2520 Q15365 PCBP1 Poly(rC)-binding protein 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.958 57.078 3 4.2274E-81 65509 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 146.13 134.28 2092700000 0 0 0 71507000 88162000 322710000 148780000 97338000 147170000 216420000 187280000 197350000 150150000 156460000 309340000 28235 2520 25790 237595;237596;237597;237598;237599;237600;237601;237602;237603;237604;237605;237606 188798;188799;188800;188801;188802;188803;188804;188805;188806;188807;188808;188809;188810;188811;188812;188813;188814;188815;188816;188817;188818 188812 4145 21 LEEDINSSMTNSTAASRPPVTLR Unmodified 2488.2228 0.22276567 2520 Q15365 PCBP1 Poly(rC)-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.8 66.882 3 8.8686E-81 76600 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 145.75 137.76 1371200000 0 0 0 15330000 37671000 182100000 34394000 68325000 66552000 161870000 132870000 100340000 72055000 123910000 375810000 28236 2520 25790 237607;237608;237609;237610;237611;237612;237613;237614;237615;237616;237617;237618 188819;188820;188821;188822;188823;188824;188825;188826;188827;188828;188829;188830;188831;188832;188833;188834;188835 188819 17 LEEDISSSMTNSTAASRPPVTLR Oxidation (M) 2477.2068 0.20678125 2521 Q15366 PCBP2 Poly(rC)-binding protein 2 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.07 58.185 3 4.4111E-81 66040 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 145.9 133.6 2494100000 0 0 0 95666000 124340000 318010000 177570000 127480000 169270000 262130000 246490000 248150000 244250000 184940000 295780000 28237 2521 25791 237619;237620;237621;237622;237623;237624;237625;237626;237627;237628;237629;237630 188836;188837;188838;188839;188840;188841;188842;188843;188844;188845;188846;188847;188848;188849;188850;188851;188852;188853;188854;188855;188856;188857;188858;188859 188840 4152 24 LEEDISSSMTNSTAASRPPVTLR Unmodified 2461.2119 0.21186663 2521 Q15366 PCBP2 Poly(rC)-binding protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.427 69.501 3 1.2127E-20 79732 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 88.755 70.931 992670000 0 0 0 10582000 21785000 116690000 21018000 53899000 56710000 128390000 97863000 74708000 43583000 76511000 290940000 28238 2521 25791 237631;237632;237633;237634;237635;237636;237637;237638;237639;237640;237641;237642 188860;188861;188862;188863;188864;188865;188866;188867;188868;188869;188870;188871;188872;188873;188874 188861 13 LEEEDEDEEDGESGCTFLVGLIQK Unmodified 2740.1909 0.190916 1057 P17655 CAPN2 Calpain-2 catalytic subunit yes yes 0 0 0 By MS/MS 2 0 1 1 94.123 85.993 3 2.5455E-08 111264 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.771 70.048 10462000 10462000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28239 1057 25792 237643 188875 188875 1 LEEEEGMAASLSAAK Unmodified 1534.7185 0.71848835 4418 Q9H6N6 MYH16 Putative uncharacterized protein MYH16 yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 69.124 63.654 2 0.010516 80878 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 52.579 12.534 52484000 605810 51878000 0 0 0 0 0 0 0 0 0 0 0 0 0 28240 4418 25793 237644;237645 188876 188876 1 LEEEEGMAASLSAAK Oxidation (M) 1550.7134 0.71340297 4418 Q9H6N6 MYH16 Putative uncharacterized protein MYH16 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 22.717 22.923 2 0.0027108 22786 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 43.77 19.74 31802000 0 0 0 0 2276200 0 2605400 2591600 3173500 6049800 5611900 5178300 0 4315300 0 28241 4418 25793 237646;237647;237648;237649;237650;237651;237652;237653 188877 188877 5871 1 LEEEIVEQTMR Oxidation (M) 1391.6602 0.66024519 496 O75419 CDC45 Cell division control protein 45 homolog yes yes 0 1 0 By matching By MS/MS 10 0 2 1 1 46.177 46.267 2 0.036184 51429 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 52.725 17.457 6842600 0 0 0 1969200 0 0 0 0 0 0 0 4873400 0 0 0 28242 496 25794 237654;237655 188878 188878 0 LEEELAAERK Unmodified 1186.6194 0.61936665 4812 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.3 2.1 1 9 1 1 1 1 1 1 1 1 1 1 25.342 25.086 3 0.010267 31148 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 57.347 47.692 76002000 0 7599400 0 0 5938900 7630700 6644900 0 5923500 7294300 6176600 0 6445400 9434100 12914000 28243 4812 25795 237656;237657;237658;237659;237660;237661;237662;237663;237664;237665 188879;188880;188881;188882 188881 3 LEEELSVLK Unmodified 1058.5859 0.58594126 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 67.292 64.011 2 0.0073021 81330 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.64 61.54 73653000 0 69558000 0 4094600 0 0 0 0 0 0 0 0 0 0 0 28244 2291 25796 237666;237667;237668;237669;237670;237671;237672;237673;237674;237675;237676;237677 188883;188884;188885;188886;188887;188888;188889;188890;188891;188892;188893;188894 188886 11 LEEENRSLK Unmodified 1116.5775 0.57750184 1660 P51572 BCAP31 B-cell receptor-associated protein 31 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 15.297 12.045 2 0.021482 15527 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 111.17 28.715 53677000 6756600 34141000 12779000 0 0 0 0 0 0 0 0 0 0 0 0 28245 1660 25797 237678;237679;237680 188895;188896 188896 1 LEEEQIILEDQNCK Unmodified 1759.8298 0.82982971 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 63.121 63.29 2 3.72E-22 72373 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 174.24 155.97 80147000 0 0 0 0 3560200 9720800 0 0 6613000 11800000 8869200 14485000 7851900 8971900 8275600 28246 1356 25798 237681;237682;237683;237684;237685;237686;237687;237688;237689 188897;188898;188899;188900;188901;188902;188903;188904;188905 188901 9 LEEERSVLNNQLLEMK Oxidation (M) 1959.9935 0.993541 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 1 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 70.166 66.217 3 4.6447E-06 81698 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 99.451 86.039 34635000 0 4157800 30478000 0 0 0 0 0 0 0 0 0 0 0 0 28247 1286 25799 237690;237691;237692 188906;188907;188908;188909;188910 188909 1892 3 LEEETEEDEEEK Unmodified 1507.605 0.60495796 3372 Q8N954 GPATCH11 G patch domain-containing protein 11 yes yes 0 0 0 By MS/MS 10 0 1 1 15.79 16.303 2 0.0023783 15270 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.283 61.9 3218800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3218800 28248 3372 25800 237693 188911 188911 1 LEEFEEK Unmodified 922.42838 0.42837799 4630 Q9NSV4 DIAPH3 Protein diaphanous homolog 3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.432 27.63 2 0.023411 29236 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 91.906 60.327 389380000 0 0 0 18658000 21960000 45529000 24066000 25072000 25372000 36183000 37879000 48395000 32336000 33355000 40574000 28249 4630 25801 237694;237695;237696;237697;237698;237699;237700;237701;237702;237703;237704;237705 188912;188913;188914;188915;188916;188917;188918 188915 7 LEEFVNGLDK Unmodified 1162.587 0.58700389 2810 Q5VT52 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 2 1 1 1 63.065 60.909 2 0.00040238 69528 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 123.21 82.179 57019000 0 40797000 0 14662000 0 0 0 0 0 1559900 0 0 0 0 0 28250 2810 25802 237706;237707;237708;237709;237710;237711;237712;237713;237714 188919;188920;188921;188922;188923;188924;188925;188926;188927 188926 9 LEEGLVNNK Unmodified 1014.5346 0.53457439 3467 Q8NI36 WDR36 WD repeat-containing protein 36 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.8 3.92 2 3 1 1 1 1 1 29.747 28.234 2 0.00041358 36369 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.58 78.517 953350000 0 922010000 6173500 0 5396000 0 0 0 6136400 0 0 0 13630000 0 0 28251 3467 25803 237715;237716;237717;237718;237719 188928;188929;188930;188931;188932 188929 4 LEEHEESLVGR Unmodified 1296.631 0.63099397 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 30.311 30.549 3 0.0070143 31893 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 48.948 34.262 135090000 0 0 0 0 6407900 10488000 6874600 7784000 10931000 12162000 16508000 15479000 16071000 9531800 22852000 28252 2446 25804 237720;237721;237722;237723;237724;237725;237726;237727;237728;237729;237730 188933;188934;188935;188936;188937;188938;188939 188937 6 LEEIDGFFAR Unmodified 1195.5873 0.58733824 145 O00391 QSOX1 Sulfhydryl oxidase 1 yes yes 0 0 0 By MS/MS 10 0 1 1 80.092 79.657 2 0.031631 92492 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 57.59 44.8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28253 145 25805 237731 188940 188940 1 LEEIEADK Unmodified 945.46549 0.46549177 4653 Q9NUQ8 ABCF3 ATP-binding cassette sub-family F member 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24.524 24.001 2 0.003081 25539 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 147.52 44.805 806050000 16257000 178780000 0 36401000 28189000 48945000 47060000 42598000 32891000 57670000 59311000 66189000 61668000 46817000 83272000 28254 4653 25806 237732;237733;237734;237735;237736;237737;237738;237739;237740;237741;237742;237743;237744;237745 188941;188942;188943;188944;188945;188946;188947;188948;188949;188950;188951;188952;188953;188954;188955;188956;188957 188942 17 LEEIEADKAPAR Unmodified 1340.6936 0.69359423 4653 Q9NUQ8 ABCF3 ATP-binding cassette sub-family F member 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 30.614 30.78 3 1.888E-05 32942 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 83.617 51.609 54690000 0 0 0 5799800 4080800 0 7320300 0 2145300 4917300 0 19707000 5228100 0 5491300 28255 4653 25807 237746;237747;237748;237749;237750;237751;237752;237753 188958;188959;188960;188961;188962;188963 188961 5 LEEIQQQILQQK Unmodified 1496.8199 0.81985738 3591 Q8WXH0 SYNE2 Nesprin-2 yes yes 0 0 0 By MS/MS 2 0 1 1 68.918 63.019 2 0.0029659 80448 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.15 84.058 11774000 0 11774000 0 0 0 0 0 0 0 0 0 0 0 0 0 28256 3591 25808 237754 188964 188964 1 LEELDADK Unmodified 931.44984 0.44984171 4879 Q9UG63 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.922 25.125 2 0.013883 25296 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 71.379 10.62 158470000 0 0 0 9250900 7402500 18745000 11213000 10044000 7272800 17818000 14113000 15305000 14576000 10187000 22539000 28257 4879 25809 237755;237756;237757;237758;237759;237760;237761;237762;237763;237764;237765;237766 188965;188966;188967;188968 188966 4 LEELDADKAEMR Oxidation (M) 1434.6661 0.66605885 4879 Q9UG63 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 0 1 1 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 29.941 30.254 3 0.0043347 32512 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 44.457 28.701 64339000 0 0 0 9971600 0 0 0 0 3036600 6763700 6452400 13482000 9441300 6915800 8275500 28258 4879 25810 237767;237768;237769;237770;237771;237772;237773;237774 188969;188970 188970 6228 2 LEELHVIDVK Unmodified 1193.6656 0.66558856 2608 Q16531 DDB1 DNA damage-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 61.499 62.078 2 0.0024906 70070 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.149 59.325 6146200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6146200 28259 2608 25811 237775;237776 188971;188972 188971 2 LEELILEDTSLSPEER Unmodified 1871.9364 0.93640328 2465 Q14CX7 NAA25 N-alpha-acetyltransferase 25, NatB auxiliary subunit yes yes 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 82.719 82.901 3 0.031264 95723 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 25.167 21.563 12812000 0 0 0 0 0 0 2590200 4973700 5247800 0 0 0 0 0 0 28260 2465 25812 237777;237778;237779 188973 188973 0 LEELILEDTSLSPEERK Unmodified 2000.0314 0.031366293 2465 Q14CX7 NAA25 N-alpha-acetyltransferase 25, NatB auxiliary subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.56 3.47 1 2 6 2 1 1 1 1 1 1 1 79.089 77.517 3 8.8087E-83 89576 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 181.74 165.62 850640000 51048000 8322900 0 0 0 0 138310000 248310000 346830000 22460000 17199000 18160000 0 0 0 28261 2465 25813 237780;237781;237782;237783;237784;237785;237786;237787;237788 188974;188975;188976;188977;188978;188979;188980;188981;188982;188983;188984;188985 188982 12 LEELRQHAACK Unmodified 1353.6823 0.68231804 632 O95239 KIF4A Chromosome-associated kinesin KIF4A yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14.627 14.252 2;3 0.0011291 12632 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.434 28.104 75873000 3970700 0 1035700 3907800 4592900 3919800 4652200 4270500 2664400 8671800 5547700 9035300 6730000 5501200 11373000 28262 632 25814 237789;237790;237791;237792;237793;237794;237795;237796;237797;237798;237799;237800;237801;237802 188986;188987;188988;188989;188990;188991;188992;188993 188987 8 LEELSLEGNPFLTVNDNLK Unmodified 2144.1001 0.10011456 4876 Q9UFC0 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 98.203 91.727 2 1.3381E-06 113753 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.42 111.44 53630000 40424000 13206000 0 0 0 0 0 0 0 0 0 0 0 0 0 28263 4876 25815 237803;237804 188994 188994 1 LEELSNQLHR Unmodified 1237.6415 0.64149908 4580 Q9NQX4 MYO5C Unconventional myosin-Vc yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 37.628 37.89 3 0.0027524 40902 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 60.398 42.589 72388000 0 0 0 0 5985400 9134300 6509900 0 0 10961000 7603900 9698300 7634600 8521700 6338700 28264 4580 25816 237805;237806;237807;237808;237809;237810;237811;237812;237813 188995;188996;188997;188998;188999;189000;189001;189002 188999 8 LEELYTK Unmodified 894.46985 0.46984887 5036 Q9UNM6 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 33.633 33.641 2 0.018227 36671 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 112.37 41.229 198040000 0 0 0 26321000 37768000 42144000 0 0 0 43626000 0 48186000 0 0 0 28265 5036 25817 237814;237815;237816;237817;237818 189003;189004;189005;189006;189007 189005 5 LEEMFPDEVDTPRDVAAR Oxidation (M) 2104.9735 0.97353384 2654 Q2NL82 TSR1 Pre-rRNA-processing protein TSR1 homolog yes yes 0 1 1 By MS/MS 10 0 1 1 64.805 65.003 3 0.0018493 73478 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 45.14 39.81 4755400 0 0 0 0 0 0 0 0 0 0 0 0 0 4755400 0 28266 2654 25818 237819 189008 189008 4321 0 LEEMGFK Oxidation (M) 868.40005 0.40005474 2373;4663 Q14141;Q9NVA2 SEPT6;SEPT11 Septin-6;Septin-11 no no 0 1 0 By MS/MS 10 0 1 1 23.382 23.877 2 0.034262 24699 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 60.358 15.827 4062600 0 0 0 0 0 0 0 0 0 0 4062600 0 0 0 0 28267 2373;4663 25819 237820 189009 189009 1 LEEMGFK Unmodified 852.40514 0.40514012 2373;4663 Q14141;Q9NVA2 SEPT6;SEPT11 Septin-6;Septin-11 no no 0 0 0 By MS/MS 10 0 1 1 41.671 42.131 2 0.030762 46791 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 74.439 27.775 11391000 0 0 0 0 0 0 0 0 0 0 11391000 0 0 0 0 28268 2373;4663 25819 237821 189010 189010 1 LEEMGFTDVGPENKPVSVQETYEAK Oxidation (M) 2812.3113 0.3113059 4799 Q9P0V9 SEPT10 Septin-10 yes yes 0 1 1 By MS/MS 2 0 1 1 73.467 67.922 3 5.9722E-22 85902 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.54 64.587 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28269 4799 25820 237822 189011 189011 6156 1 LEEMVTRLDQEVAEVDK Unmodified 2002.9881 0.98812127 4063 Q99816 TSG101 Tumor susceptibility gene 101 protein yes yes 0 0 1 By MS/MS By matching By MS/MS 2 0 3 1 1 1 84.023 78.902 3 0.0036871 96790 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 47.639 30.358 64516000 12245000 47719000 4552400 0 0 0 0 0 0 0 0 0 0 0 0 28270 4063 25821 237823;237824;237825 189012;189013 189013 2 LEEMVTRLDQEVAEVDK Oxidation (M) 2018.983 0.98303589 4063 Q99816 TSG101 Tumor susceptibility gene 101 protein yes yes 0 1 1 By MS/MS 2 0 1 1 72.722 69.637 3 0.0025642 85160 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 51.695 29.541 7685700 0 0 7685700 0 0 0 0 0 0 0 0 0 0 0 0 28271 4063 25821 237826 189014 189014 5561 1 LEENHELFSK Unmodified 1244.6037 0.60371659 4874 Q9UEY8 ADD3 Gamma-adducin yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 36.721 36.053 2;3 0.003801 45932 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 99.815 54.734 257390000 0 30104000 90013000 2179700 10210000 10644000 9615700 9775700 7947900 11646000 14787000 16986000 12781000 10011000 20688000 28272 4874 25822 237827;237828;237829;237830;237831;237832;237833;237834;237835;237836;237837;237838;237839;237840;237841 189015;189016;189017 189016 2 LEENIDNIK Unmodified 1086.5557 0.55570376 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 42.223 41.429 2 0.00080005 52883 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145.63 52.371 785620000 0 264280000 1934100 25198000 28078000 44066000 33195000 51310000 32621000 50292000 46596000 45855000 51032000 41829000 69330000 28273 3676 25823 237842;237843;237844;237845;237846;237847;237848;237849;237850;237851;237852;237853;237854;237855;237856 189018;189019;189020;189021;189022;189023;189024;189025;189026;189027;189028;189029;189030;189031;189032 189021 15 LEENLPILQQPTEK Unmodified 1650.8829 0.88285156 421 O60664 PLIN3 Perilipin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.81 3.5 7 2 23 2 5 2 2 2 2 2 2 2 2 2 2 2 2 1 77.127 76.239 2;3 7.6098E-19 87952 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 146.16 125.39 10455000000 40975000 4663800000 7658200 281220000 386360000 377620000 410970000 581900000 333240000 567930000 546990000 814180000 538980000 420400000 482820000 28274 421 25824 237857;237858;237859;237860;237861;237862;237863;237864;237865;237866;237867;237868;237869;237870;237871;237872;237873;237874;237875;237876;237877;237878;237879;237880;237881;237882;237883;237884;237885;237886;237887;237888 189033;189034;189035;189036;189037;189038;189039;189040;189041;189042;189043;189044;189045;189046;189047;189048;189049;189050;189051;189052;189053;189054;189055;189056;189057;189058;189059;189060;189061 189050 16 LEEPMMNLK Oxidation (M) 1119.5304 0.53041699 5380 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 19.519 19.999 2 0.0091129 20214 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 59.205 25.26 + 15583000 0 0 0 0 0 0 0 0 0 2930900 3468300 5007400 0 0 4176700 28275 5380 25825 237889;237890;237891;237892 189062;189063;189064;189065 189064 6757 4 LEEPPELNR Unmodified 1095.556 0.55603812 3108 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 44.703 44.875 2 0.0032698 50176 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 93.162 57.282 510610000 0 0 0 24785000 21360000 28510000 40313000 27739000 31597000 39097000 55458000 56245000 50430000 46753000 88323000 28276 3108 25826 237893;237894;237895;237896;237897;237898;237899;237900;237901;237902;237903;237904 189066;189067;189068;189069;189070;189071;189072;189073;189074;189075;189076;189077;189078;189079;189080;189081;189082;189083 189074 16 LEEPSLR Unmodified 842.44978 0.44978213 154 O00429 DNM1L Dynamin-1-like protein yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 37.254 37.383 2 0.026251 41374 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 79.116 18.328 100620000 0 0 0 5601200 7670300 9521100 7418700 7131900 4708300 16159000 10016000 12368000 9612500 10414000 0 28277 154 25827 237905;237906;237907;237908;237909;237910;237911;237912;237913;237914;237915 189084;189085 189085 2 LEEQARAK Unmodified 943.50869 0.50869399 2399 Q14247 CTTN Src substrate cortactin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 6.2011 3.2419 2 0.017233 5075 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.89 16.175 344790000 27657000 196880000 120250000 0 0 0 0 0 0 0 0 0 0 0 0 28278 2399 25828 237916;237917;237918 189086 189086 1 LEEQDEFEK Unmodified 1165.5139 0.51389853 4635 Q9NTJ5 SACM1L Phosphatidylinositide phosphatase SAC1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 30.719 30.806 2 0.0031541 33400 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 92.439 47.992 24551000 0 0 0 2717200 1875100 0 2732200 0 2348100 3824300 3051600 0 4690500 3312400 0 28279 4635 25829 237919;237920;237921;237922;237923;237924;237925;237926;237927;237928;237929;237930;237931 189087;189088;189089;189090;189091;189092;189093;189094;189095;189096;189097 189092 11 LEEQLGR Unmodified 843.44503 0.4450311 4104 Q9BR76;A9Z1Z3 CORO1B;FER1L4 Coronin-1B;Fer-1-like protein 4 yes no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.12 22.326 2 0.030762 22070 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 74.439 17.336 72928000 0 0 0 3055300 2322000 4014800 2707000 3208200 2671700 4319500 13252000 9387200 6221900 7828100 13940000 28280 4104 25830 237932;237933;237934;237935;237936;237937;237938;237939;237940;237941;237942;237943 189098;189099 189098 2 LEEQLHNEMQLK Unmodified 1510.745 0.74497787 2296 Q13464 ROCK1 Rho-associated protein kinase 1 yes yes 0 0 0 By MS/MS 2 0 2 2 54.555 48.749 2;3 8.1607E-07 63153 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.33 87.118 46452000 0 46452000 0 0 0 0 0 0 0 0 0 0 0 0 0 28281 2296 25831 237944;237945 189100;189101 189101 2 LEEQLSRSHGQEVNELK Unmodified 1995.0021 0.0021318501 3806 Q96EA4 SPDL1 Protein Spindly yes yes 0 0 1 By MS/MS 2 0 1 1 41.056 37.447 4 0.0029832 47144 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 51.888 34.486 12639000 0 0 12639000 0 0 0 0 0 0 0 0 0 0 0 0 28282 3806 25832 237946 189102 189102 1 LEEQNRLLETDSK Unmodified 1573.7948 0.79476484 401 O60447 EVI5 Ecotropic viral integration site 5 protein homolog yes yes 0 0 1 By MS/MS 3 0 1 1 42.132 37.394 3 0.020158 46599 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 43.03 28.428 3405100 0 3405100 0 0 0 0 0 0 0 0 0 0 0 0 0 28283 401 25833 237947 189103 189103 1 LEEQRDEQTSR Unmodified 1389.6484 0.64843495 3639 Q92614 MYO18A Unconventional myosin-XVIIIa yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 6.5256 6.6562 3 1.2075E-05 4065 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 133.07 82.786 51770000 0 0 0 0 3296700 4001300 3120200 4936200 3339100 7141900 0 7260500 5988900 4144800 8540500 28284 3639 25834 237948;237949;237950;237951;237952;237953;237954;237955;237956;237957;237958 189104;189105;189106;189107;189108;189109;189110;189111;189112;189113 189106 10 LEEQRPERVK Unmodified 1282.6993 0.69934831 984 P13693;Q9HAU6 TPT1;TPT1P8 Translationally-controlled tumor protein;Putative translationally-controlled tumor protein-like protein TPT1P8 yes no 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 13.715 10.55 3 0.046522 13424 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 66.435 50.181 956930000 791380000 0 165550000 0 0 0 0 0 0 0 0 0 0 0 0 28285 984 25835 237959;237960 189114 189114 0 LEERLTDTEAEK Unmodified 1432.7046 0.70455285 4179 Q9BV73 CEP250 Centrosome-associated protein CEP250 yes yes 0 0 1 By MS/MS By matching 2 0 2 1 1 32.197 28.313 3 0.028621 37253 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 42.209 29.941 9084100 0 7611700 1472500 0 0 0 0 0 0 0 0 0 0 0 0 28286 4179 25836 237961;237962 189115 189115 1 LEERPHLPSTFNYNPAQQAF Unmodified 2358.1393 0.13929403 4779 Q9NZN8 CNOT2 CCR4-NOT transcription complex subunit 2 yes yes 0 0 1 By MS/MS By MS/MS 6 4 1 1 1 1 83.413 79.462 3 1.9417E-05 92810 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.281 51.659 32775000 17126000 0 0 0 0 0 0 0 0 0 0 0 0 0 15649000 28287 4779 25837 237963;237964 189116;189117;189118 189116 3 LEESADNILSIVK Unmodified 1429.7664 0.76642482 139 O00287 RFXAP Regulatory factor X-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83.843 83.377 2 2.6428E-13 96135 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 138.71 92.251 420390000 0 58582000 713410 6241800 15118000 17311000 13737000 21193000 35271000 49417000 43078000 43535000 25738000 35403000 55055000 28288 139 25838 237965;237966;237967;237968;237969;237970;237971;237972;237973;237974;237975;237976;237977;237978 189119;189120;189121;189122;189123;189124;189125;189126;189127;189128;189129;189130;189131 189125 12 LEESAVTVMFDK Oxidation (M) 1383.6592 0.65918256 4772 Q9NZL9 MAT2B Methionine adenosyltransferase 2 subunit beta yes yes 0 1 0 By MS/MS By MS/MS By matching 2.25 0.433 3 1 1 2 1 66.77 61.102 2 2.4109E-05 78043 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.4 87.793 226320000 20500000 201740000 4078600 0 0 0 0 0 0 0 0 0 0 0 0 28289 4772 25839 237979;237980;237981;237982 189132;189133;189134;189135 189133 6141 4 LEESAVTVMFDK Unmodified 1367.6643 0.66426794 4772 Q9NZL9 MAT2B Methionine adenosyltransferase 2 subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 1 3 1 81.652 75.235 2 0.0002606 91878 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 94.616 68.678 348890000 41453000 307430000 0 0 0 0 0 0 0 0 0 0 0 0 0 28290 4772 25839 237983;237984;237985;237986;237987 189136;189137;189138;189139;189140;189141 189139 6 LEESHNRFSATEVTNK Unmodified 1860.8966 0.89660415 3308 Q8N163 CCAR2 Cell cycle and apoptosis regulator protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 32.174 30.966 3 0.00014684 44027 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.317 67.804 163910000 123220000 12601000 0 1807200 1541700 0 3649400 3587900 5151400 0 0 8112300 0 4243900 0 28291 3308 25840 237988;237989;237990;237991;237992;237993;237994;237995;237996 189142;189143;189144 189144 3 LEESLLATEK Unmodified 1131.6023 0.60231961 4621 Q9NS87 KIF15 Kinesin-like protein KIF15 yes yes 0 0 0 By MS/MS 2 0 1 1 56.299 50.484 2 0.006303 65314 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.309 27.298 55121000 0 55121000 0 0 0 0 0 0 0 0 0 0 0 0 0 28292 4621 25841 237997 189145 189145 1 LEESQPTHLIPPLPEK Unmodified 1826.9778 0.97781458 2824 Q5VWJ9 SNX30 Sorting nexin-30 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 77.077 74.366 3 3.0436E-07 92975 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.138 70.454 107400000 350220 103830000 3226700 0 0 0 0 0 0 0 0 0 0 0 0 28293 2824 25842 237998;237999;238000;238001 189146;189147;189148 189146 3 LEESTNYNQQLR Unmodified 1493.711 0.71103521 2676 Q3V6T2 CCDC88A Girdin yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 35.921 36.307 2 0.013096 39767 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 71.349 47.319 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28294 2676 25843 238002;238003 189149;189150 189149 2 LEESYDLEPFLR Unmodified 1509.7351 0.73512469 1623 P50452 SERPINB8 Serpin B8 yes yes 0 0 0 By MS/MS 10 0 1 1 84.986 84.603 2 0.0014896 98345 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 81.338 38.594 3684000 0 0 0 3684000 0 0 0 0 0 0 0 0 0 0 0 28295 1623 25844 238004 189151 189151 1 LEESYDMESVLR Unmodified 1469.6708 0.67080988 1344 P35237 SERPINB6 Serpin B6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74.294 73.725 2 2.385E-05 85248 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 91.855 79.848 238150000 15542000 0 0 4224100 6204400 13084000 7531200 7704000 11686000 14649000 29167000 23750000 11118000 21398000 72096000 28296 1344 25845 238005;238006;238007;238008;238009;238010;238011;238012;238013;238014;238015;238016;238017;238018 189152;189153;189154;189155;189156;189157;189158;189159;189160;189161;189162;189163;189164;189165 189153 13 LEESYDMESVLR Oxidation (M) 1485.6657 0.6657245 1344 P35237 SERPINB6 Serpin B6 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.64 2.9 1 1 9 2 1 1 1 1 1 1 1 1 1 53.863 52.725 2 4.6824E-11 58696 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 148.32 125 156000000 0 72408000 0 4311500 4216300 0 7168300 3548400 0 0 22582000 0 8613300 0 33155000 28297 1344 25845 238019;238020;238021;238022;238023;238024;238025;238026;238027;238028;238029 189166;189167;189168;189169;189170;189171;189172;189173;189174;189175 189168 2039 10 LEESYDMESVLRNLGMTDAFELGK Oxidation (M) 2762.2779 0.27789728 1344 P35237 SERPINB6 Serpin B6 yes yes 0 1 1 By MS/MS By MS/MS 2.4 0.49 3 2 3 2 97.11 91.539 3 7.241E-103 115935 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 153.83 132.22 172740000 128740000 44000000 0 0 0 0 0 0 0 0 0 0 0 0 0 28298 1344 25846 238030;238031;238032;238033;238034 189176;189177;189178;189179;189180;189181 189181 2039;2040 6 LEESYDMESVLRNLGMTDAFELGK Unmodified 2746.283 0.28298266 1344 P35237 SERPINB6 Serpin B6 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 99.34 95.308 3 1.0379E-108 114200 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 162.01 141.93 117460000 0 117460000 0 0 0 0 0 0 0 0 0 0 0 0 0 28299 1344 25846 238035;238036 189182;189183 189183 2 LEESYDMESVLRNLGMTDAFELGK 2 Oxidation (M) 2778.2728 0.27281191 1344 P35237 SERPINB6 Serpin B6 yes yes 0 2 1 By MS/MS 3 0 1 1 89.615 86.404 3 0.0036389 103347 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 54.672 52.095 6972900 0 6972900 0 0 0 0 0 0 0 0 0 0 0 0 0 28300 1344 25846 238037 189184 189184 2039;2040 1 LEESYTLNSDLAR Unmodified 1509.7311 0.73110195 1289 P30740 SERPINB1 Leukocyte elastase inhibitor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 62.339 61.664 2 1.0216E-54 77169 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 203.02 151.1 285480000 0 177720000 0 2103300 1830800 5797700 2765800 4534400 4501800 8571000 14657000 10915000 5081000 10609000 36395000 28301 1289 25847 238038;238039;238040;238041;238042;238043;238044;238045;238046;238047;238048;238049;238050;238051;238052 189185;189186;189187;189188;189189;189190;189191;189192;189193;189194;189195;189196;189197;189198;189199;189200;189201 189189 17 LEESYTLNSDLARLGVQDLFNSSK Unmodified 2698.345 0.34498929 1289 P30740 SERPINB1 Leukocyte elastase inhibitor yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 96.258 92.981 3 4.312E-35 115643 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.387 85.796 2486500 0 2486500 0 0 0 0 0 0 0 0 0 0 0 0 0 28302 1289 25848 238053;238054 189202;189203 189202 2 LEETLAQFPLQPGK Unmodified 1569.8403 0.84025847 3951 Q96Q05 TRAPPC9 Trafficking protein particle complex subunit 9 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 84.123 80.126 2 1.4323E-29 99554 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 142.83 107.6 80245000 0 80245000 0 0 0 0 0 0 0 0 0 0 0 0 0 28303 3951 25849 238055;238056 189204 189204 1 LEETLPVIR Unmodified 1068.6179 0.61791009 353 O43681 ASNA1 ATPase ASNA1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 69.712 69.229 2 0.0035134 79311 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 107.66 40.983 529090000 0 49511000 0 33311000 31941000 53460000 39071000 47953000 0 60964000 75257000 73320000 64300000 0 0 28304 353 25850 238057;238058;238059;238060;238061;238062;238063;238064;238065;238066;238067;238068;238069 189205;189206;189207;189208;189209;189210;189211;189212;189213;189214;189215;189216;189217 189205 13 LEEVFSEK Unmodified 979.48623 0.48622722 1718 P53609 PGGT1B Geranylgeranyl transferase type-1 subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 46.64 40.981 2 0.011953 53230 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.66 28.068 112690000 5086500 105170000 2434700 0 0 0 0 0 0 0 0 0 0 0 0 28305 1718 25851 238070;238071;238072 189218;189219;189220;189221;189222 189219 5 LEEVLSTEGAEENGNSDK Unmodified 1919.8596 0.85960952 275 O15355 PPM1G Protein phosphatase 1G yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 45.164 45.514 2 4.2673E-38 49924 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 159.64 145.22 54511000 0 0 0 0 0 6204700 2866700 0 3497000 0 9198800 8111700 6442600 5240800 12949000 28306 275 25852 238073;238074;238075;238076;238077;238078;238079;238080;238081 189223;189224;189225;189226;189227;189228;189229;189230;189231 189224 9 LEEVLSTEGAEENGNSDKK Unmodified 2047.9546 0.95457254 275 O15355 PPM1G Protein phosphatase 1G yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.71 3.81 2 1 4 1 2 1 1 1 1 40.175 38.103 3 1.3199E-23 48965 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.57 70.556 102420000 18182000 55152000 0 0 0 0 0 0 0 0 7178300 7963500 0 5625600 8317400 28307 275 25853 238082;238083;238084;238085;238086;238087;238088 189232;189233;189234;189235;189236;189237;189238;189239 189232 8 LEEVLTNK Unmodified 944.51786 0.51786169 1984 P78417 GSTO1 Glutathione S-transferase omega-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 6.9 3.81 3 1 6 1 2 1 1 1 1 1 1 1 34.198 32.463 2 0.0067028 34704 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 98.629 25.306 1851700000 69563000 1648300000 23921000 6339300 0 0 0 4367000 0 0 17782000 16912000 0 12539000 51981000 28308 1984 25854 238089;238090;238091;238092;238093;238094;238095;238096;238097;238098 189240;189241;189242;189243;189244;189245;189246;189247 189246 7 LEEVLTNKK Unmodified 1072.6128 0.61282471 1984 P78417 GSTO1 Glutathione S-transferase omega-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.12 3.89 3 1 4 1 2 1 1 1 1 1 25.617 23.618 2 0.0019909 23207 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 130.28 52.996 364880000 29658000 264000000 42306000 3423000 0 0 0 0 0 0 6138900 0 0 4790500 14564000 28309 1984 25855 238099;238100;238101;238102;238103;238104;238105;238106 189248;189249;189250;189251;189252;189253;189254;189255;189256 189251 7 LEEVRQPPPR Unmodified 1219.6673 0.6673199 690 O95785 WIZ Protein Wiz yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 21.298 21.507 3 0.0067151 22516 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 49.472 23.429 168070000 0 0 0 12832000 9657500 16882000 18297000 10440000 0 15745000 16997000 17796000 13317000 18428000 17673000 28310 690 25856 238107;238108;238109;238110;238111;238112;238113;238114;238115;238116;238117 189257;189258;189259;189260;189261;189262;189263;189264;189265 189259 5 LEEYITTSK Unmodified 1082.5496 0.54955575 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 38.314 37.569 2 0.00076164 47399 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.15 81.917 739460000 0 453820000 2829100 12627000 17809000 19976000 21776000 18615000 13905000 24437000 27437000 32337000 31906000 26592000 35391000 28311 2431 25857 238118;238119;238120;238121;238122;238123;238124;238125;238126;238127;238128;238129;238130;238131;238132 189266;189267;189268;189269;189270;189271;189272;189273;189274;189275;189276;189277;189278;189279 189270 13 LEFDVSDGATSK Unmodified 1267.5932 0.59321148 5273 Q9Y6A5 TACC3 Transforming acidic coiled-coil-containing protein 3 yes yes 0 0 0 By MS/MS 2 0 1 1 58.712 52.869 2 0.0021332 67945 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.43 71.593 78156000 0 78156000 0 0 0 0 0 0 0 0 0 0 0 0 0 28312 5273 25858 238133 189280 189280 1 LEFFGFEDHETGGDEGGSGSSNYK Unmodified 2565.0568 0.056805775 3107 Q7Z5K2 WAPAL Wings apart-like protein homolog yes yes 0 0 0 By MS/MS 2 0 1 1 84.396 76.265 3 2.1208E-05 99598 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.559 60.429 17552000 17552000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28313 3107 25859 238134 189281 189281 1 LEFGEENLPK Unmodified 1174.587 0.58700389 4077 Q99996 AKAP9 A-kinase anchor protein 9 yes yes 0 0 0 By MS/MS 2 0 1 1 69.315 63.446 2 0.0027412 80856 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.25 24.478 110060000 0 110060000 0 0 0 0 0 0 0 0 0 0 0 0 0 28314 4077 25860 238135 189282 189282 1 LEFSDETFGSNIPK Unmodified 1582.7515 0.75150304 3972 Q96RP9 GFM1 Elongation factor G, mitochondrial yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 80.675 75.963 2 1.3957E-10 94513 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 141.08 103.54 142500000 0 142500000 0 0 0 0 0 0 0 0 0 0 0 0 0 28315 3972 25861 238136;238137 189283;189284 189283 2 LEGAGSSSAPER Unmodified 1159.5469 0.54692999 1792 P57086 SCAND1 SCAN domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.602 13.763 2 3.1334E-07 12764 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 121.9 88.636 99147000 0 0 0 6597700 6904300 5746400 6481200 5787500 5513700 8909200 10031000 9544700 9959600 8063900 15608000 28316 1792 25862 238138;238139;238140;238141;238142;238143;238144;238145;238146;238147;238148;238149 189285;189286;189287;189288;189289;189290;189291;189292;189293;189294;189295 189290 9 LEGALGADTTEDGDEK Unmodified 1619.7162 0.71623974 4773 Q9NZM1 MYOF Myoferlin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 36.224 36.301 2 6.5609E-21 39635 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 116.01 106.06 24834000 0 0 0 2180200 3249300 5379600 0 0 0 0 0 5695800 4912000 3417600 0 28317 4773 25863 238150;238151;238152;238153;238154;238155;238156;238157;238158 189296;189297;189298;189299;189300;189301;189302;189303 189301 7 LEGCTSSK Unmodified 880.39603 0.396032 6 A0MZ66 KIAA1598 Shootin-1 yes yes 0 0 0 By MS/MS 2 0 1 1 1.6278 -1.6234 2 0.028816 1245 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.282 7.284 5400900 0 5400900 0 0 0 0 0 0 0 0 0 0 0 0 0 28318 6 25864 238159 189304 189304 1 LEGDAALNR Unmodified 957.48796 0.48795855 5131 Q9Y2Z0 SUGT1 Suppressor of G2 allele of SKP1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.442 24.644 2 0.0021081 26252 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 128.61 61.808 812410000 0 0 0 53675000 48749000 64343000 64784000 51406000 38975000 75394000 64569000 78614000 87389000 65129000 119390000 28319 5131 25865 238160;238161;238162;238163;238164;238165;238166;238167;238168;238169;238170;238171 189305;189306;189307;189308;189309;189310;189311;189312;189313;189314;189315;189316 189309 10 LEGDAALNRLFQQIYSDGSDEVK Unmodified 2567.2504 0.25036063 5131 Q9Y2Z0 SUGT1 Suppressor of G2 allele of SKP1 homolog yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 97.148 91.444 3 0.00048488 111830 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 54.656 42.7 34514000 29612000 4901900 0 0 0 0 0 0 0 0 0 0 0 0 0 28320 5131 25866 238172;238173 189317;189318 189317 1 LEGDLSLADK Unmodified 1059.5448 0.54480473 3226 Q8IVF2 AHNAK2 Protein AHNAK2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 48.975 49.086 2 0.0015449 55266 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 93.111 40.174 264580000 0 0 0 16338000 17039000 0 16947000 26712000 17232000 26989000 31429000 0 24102000 24907000 62889000 28321 3226 25867 238174;238175;238176;238177;238178;238179;238180;238181;238182;238183 189319;189320;189321;189322;189323;189324;189325;189326;189327;189328;189329 189319 10 LEGDLTGPSVDVEVPDVELECPDAK Unmodified 2682.2582 0.2582077 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS 2.2 0.4 4 1 1 4 88.927 83.741 2;3 1.1802E-119 105577 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 157.42 146.93 88704000 7530200 81174000 0 0 0 0 0 0 0 0 0 0 0 0 0 28322 2172 25868 238184;238185;238186;238187;238188 189330;189331;189332;189333 189332 4 LEGDLTGPSVGVEVPDVELECPDAK Unmodified 2624.2527 0.25272839 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.04 3.33 4 3 20 2 5 2 1 1 2 2 2 2 2 2 2 2 86.46 85.328 2;3 2.2696E-120 104842 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 158.37 151.34 507980000 17796000 344740000 0 0 11655000 4239400 3816000 12648000 10006000 22141000 17238000 22627000 6721000 11393000 22964000 28323 2172 25869 238189;238190;238191;238192;238193;238194;238195;238196;238197;238198;238199;238200;238201;238202;238203;238204;238205;238206;238207;238208;238209;238210;238211;238212;238213;238214;238215 189334;189335;189336;189337;189338;189339;189340;189341;189342;189343;189344;189345;189346;189347;189348;189349;189350;189351;189352;189353;189354;189355;189356;189357;189358 189342 25 LEGDNVNPESQLIQQSEQSESETAGSTK Unmodified 3004.3745 0.3745111 3701 Q93008 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 71.44 70.347 3 6.1831E-51 88140 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.974 81.346 239750000 11534000 34779000 0 4490300 13125000 23095000 11435000 12066000 8229300 20584000 19963000 20904000 12355000 14945000 32243000 28324 3701 25870 238216;238217;238218;238219;238220;238221;238222;238223;238224;238225;238226;238227;238228;238229;238230;238231 189359;189360;189361;189362;189363;189364;189365;189366;189367;189368;189369;189370;189371;189372;189373;189374;189375;189376 189367 18 LEGDSTDLSDQIAELQAQIAELK Unmodified 2486.2388 0.23879289 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 4 2 1 5 99.309 94.48 2;3 0 117220 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 271.68 231.94 1541300000 320050000 1221200000 0 0 0 0 0 0 0 0 0 0 0 0 0 28325 1356 25871 238232;238233;238234;238235;238236;238237 189377;189378;189379;189380 189377 4 LEGEHERDLESTSR Unmodified 1656.7703 0.770341 2770 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 18.348 18.355 3 0.00098396 18347 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 58.21 38.633 14243000 0 0 0 0 2525200 4174400 2526900 0 1390400 3626100 0 0 0 0 0 28326 2770 25872 238238;238239;238240;238241;238242 189381;189382;189383;189384;189385 189381 5 LEGELQAPDLELSLPAIHVEGLDIK Unmodified 2698.4429 0.44291242 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 98.473 93.082 3 3.1738E-12 116674 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.326 62.255 42679000 32468000 10211000 0 0 0 0 0 0 0 0 0 0 0 0 0 28327 2172 25873 238243;238244;238245 189386;189387;189388 189387 3 LEGELTEEVEMAK Oxidation (M) 1492.6967 0.69669028 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 1 0 By MS/MS 2 0 2 2 62.838 56.944 2 0.001847 72532 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.879 59.781 26011000 0 26011000 0 0 0 0 0 0 0 0 0 0 0 0 0 28328 2431 25874 238246;238247 189389;189390 189389 3995 2 LEGELTEEVEMAK Unmodified 1476.7018 0.70177565 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 0 By MS/MS 2 0 1 1 71.503 65.776 2 0.0018622 83396 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.06 84.414 24599000 0 24599000 0 0 0 0 0 0 0 0 0 0 0 0 0 28329 2431 25874 238248 189391 189391 1 LEGEPSVRKPK Unmodified 1238.6983 0.69828568 2958 Q6PJG2 ELMSAN1 ELM2 and SANT domain-containing protein 1 yes yes 0 0 2 By MS/MS 2 0 1 1 22.649 17.753 3 0.0024544 25538 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 91.549 66.696 19376000 19376000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28330 2958 25875 238249 189392 189392 0 LEGEVTPNSLSTSYK Unmodified 1623.7992 0.79918151 3250 Q8IWZ3 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 57.015 57.329 2 1.3909E-05 64282 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 92.866 67.207 42272000 0 0 0 0 0 5637800 0 0 0 4558700 6435300 7242300 5736200 4290400 8371300 28331 3250 25876 238250;238251;238252;238253;238254;238255;238256;238257;238258 189393;189394;189395;189396;189397;189398;189399 189397 7 LEGFHTQISK Unmodified 1158.6033 0.60332266 2127 Q06323 PSME1 Proteasome activator complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 6.63 3.86 10 3 17 7 2 4 1 1 1 2 1 2 1 2 1 2 2 1 40.989 38.697 2;3 1.0395E-10 49326 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 172.88 127.16 7476500000 4165000000 1247500000 1322500000 34264000 1074900 72503000 45391000 45131000 23340000 62710000 114390000 127240000 64917000 87555000 62898000 28332 2127 25877 238259;238260;238261;238262;238263;238264;238265;238266;238267;238268;238269;238270;238271;238272;238273;238274;238275;238276;238277;238278;238279;238280;238281;238282;238283;238284;238285;238286;238287;238288 189400;189401;189402;189403;189404;189405;189406;189407;189408;189409;189410;189411;189412;189413;189414;189415;189416;189417;189418;189419;189420;189421 189418 16 LEGGEVDLK Unmodified 958.49713 0.49712625 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.491 35.685 2 0.0099526 37999 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.246 20.554 430760000 0 0 0 21544000 18752000 23455000 0 36283000 27757000 29510000 33357000 56975000 58231000 41135000 83758000 28333 2172 25878 238289;238290;238291;238292;238293;238294;238295;238296;238297;238298;238299;238300 189422;189423;189424;189425;189426;189427;189428;189429;189430;189431;189432;189433 189425 12 LEGGGGPAGGFEDEGEDK Unmodified 1719.7224 0.72238775 1628 P50548 ERF ETS domain-containing transcription factor ERF yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 41.13 41.309 2 1.6395E-32 45127 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 124.3 120.63 76951000 0 0 0 6188100 4646200 6235200 5681900 0 6157500 10234000 6196200 8875300 8542800 4563700 9630100 28334 1628 25879 238301;238302;238303;238304;238305;238306;238307;238308;238309;238310;238311 189434;189435;189436;189437;189438;189439;189440;189441;189442;189443;189444 189437 11 LEGGGGPAGGFEDEGEDKK Unmodified 1847.8174 0.81735077 1628 P50548 ERF ETS domain-containing transcription factor ERF yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 34.302 34.435 3 0.00042749 37828 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 44.788 42.899 72377000 0 0 0 5738700 5806200 5693500 8502800 4631800 5506000 5911500 10494000 0 6974300 6258300 6859900 28335 1628 25880 238312;238313;238314;238315;238316;238317;238318;238319;238320;238321;238322 189445;189446;189447;189448;189449;189450;189451;189452;189453;189454;189455 189446 10 LEGGGGPAPPPAPPSTGRK Unmodified 1741.9111 0.911132 4113 Q9BRQ0 PYGO2 Pygopus homolog 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 34.147 34.083 3 6.0478E-05 37284 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 45.577 37.867 198790000 0 0 5102000 7988000 0 12045000 14265000 12072000 13069000 13663000 31646000 25884000 15870000 16023000 31162000 28336 4113 25881 238323;238324;238325;238326;238327;238328;238329;238330;238331;238332;238333;238334 189456;189457;189458;189459;189460;189461;189462;189463;189464;189465;189466;189467 189460 12 LEGGQQVGMHSK Unmodified 1269.6136 0.61356977 3496 Q8TD19 NEK9 Serine/threonine-protein kinase Nek9 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 18.583 15.599 3 0.041455 19649 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 23.468 10.512 15783000 0 11736000 4046800 0 0 0 0 0 0 0 0 0 0 0 0 28337 3496 25882 238335;238336 189468 189468 1 LEGGSGGDSEVQR Unmodified 1289.5848 0.58477206 1876 P62195 PSMC5 26S protease regulatory subunit 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 13.298 13.433 2 1.8245E-26 12612 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 164.43 152.2 459280000 0 0 0 37040000 51997000 0 20208000 0 0 96242000 0 156110000 21421000 23958000 52307000 28338 1876 25883 238337;238338;238339;238340;238341;238342;238343;238344;238345;238346 189469;189470;189471;189472;189473;189474;189475;189476;189477;189478;189479 189479 11 LEGHELPADLPPHLVPPSK Unmodified 2045.0946 0.094575672 4403 Q9H4M9 EHD1 EH domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 1.8 0.4 1 4 2 1 2 85.066 82.474 3;4 8.0194E-05 91622 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 66.261 56.891 173120000 53139000 90276000 29708000 0 0 0 0 0 0 0 0 0 0 0 0 28339 4403 25884 238347;238348;238349;238350;238351 189480;189481;189482;189483;189484;189485 189484 5 LEGHGLPANLPR Unmodified 1272.6939 0.693869 4777 Q9NZN4 EHD2 EH domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 50.071 50.226 3 1.5967E-06 56986 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 113.03 79.801 474890000 0 0 0 22873000 22547000 45259000 32512000 28949000 0 45785000 49939000 74187000 44746000 34647000 73446000 28340 4777 25885 238352;238353;238354;238355;238356;238357;238358;238359;238360;238361;238362;238363 189486;189487;189488;189489;189490;189491;189492;189493;189494;189495;189496;189497;189498;189499;189500;189501;189502;189503;189504;189505 189492 20 LEGIITR Unmodified 800.4756 0.47560295 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.716 39.895 2 0.03326 44293 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 72.138 0 139390000 0 0 0 7146400 5778000 12920000 9979100 10008000 4937700 15123000 14416000 17189000 10083000 12228000 19580000 28341 5071 25886 238364;238365;238366;238367;238368;238369;238370;238371;238372;238373;238374;238375 189506;189507 189507 2 LEGIPAYIVVPQTAPDCK Unmodified 1970.0183 0.018299186 4305 Q9GZT4 SRR Serine racemase yes yes 0 0 0 By MS/MS 2 0 2 2 90.694 85.798 2;3 2.3398E-07 106523 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.69 105 80890000 0 80890000 0 0 0 0 0 0 0 0 0 0 0 0 0 28342 4305 25887 238376;238377 189508;189509;189510 189508 3 LEGIVNK Unmodified 771.44905 0.44905385 4011 Q99460 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 24.666 24.905 2 0.024293 26736 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 99.384 54.411 275080000 0 0 0 0 11491000 13255000 15142000 13673000 9855900 59700000 21194000 80374000 10398000 8851700 31150000 28343 4011 25888 238378;238379;238380;238381;238382;238383;238384;238385;238386;238387;238388 189511;189512 189511 2 LEGLEDALQK Unmodified 1114.587 0.58700389 66;58;779;80 P04259;CON__P50446;CON__P02538;P02538;CON__P04259 KRT6B;KRT6A Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 6A no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.18 3.29 3 1 13 1 2 1 2 1 1 1 1 1 1 1 1 1 1 1 61.344 60.043 2 7.6641E-08 67541 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 151.97 70.855 + 2716900000 14018000 388450000 3047700 574120000 81445000 97375000 126400000 249080000 70007000 167860000 111980000 134930000 517680000 98725000 81830000 28344 779;80;58;66 25889 238389;238390;238391;238392;238393;238394;238395;238396;238397;238398;238399;238400;238401;238402;238403;238404;238405 189513;189514;189515;189516;189517;189518;189519;189520;189521;189522;189523;189524;189525;189526;189527;189528;189529;189530;189531;189532;189533;189534;189535 189527 22 LEGLGSSEADQDGLASTVR Unmodified 1903.9123 0.91231379 2135 Q07065 CKAP4 Cytoskeleton-associated protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 64.702 64.782 2 4.4545E-09 74293 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 95.264 82.634 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28345 2135 25890 238406;238407;238408;238409;238410;238411;238412;238413;238414;238415;238416 189536;189537;189538;189539;189540;189541;189542;189543;189544;189545;189546 189536 11 LEGLPPSWYK Unmodified 1188.6179 0.61791009 435 O60828 PQBP1 Polyglutamine-binding protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 76.088 76.275 2 0.016128 87844 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 49.715 20.757 9255400 0 0 0 0 0 0 0 9255400 0 0 0 0 0 0 0 28346 435 25891 238417 189547 189547 1 LEGLTDEFEELEFLSTINVGLTSIANLPK Unmodified 3191.6489 0.64894203 1404 P39687 ANP32A Acidic leucine-rich nuclear phosphoprotein 32 family member A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.5 0.5 2 2 1 2 1 104.96 101.35 3 3.0368E-121 124914 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 152.5 150.13 66049000 13959000 48933000 3156600 0 0 0 0 0 0 0 0 0 0 0 0 28347 1404 25892 238418;238419;238420;238421 189548;189549;189550;189551;189552 189548 5 LEGLTDEINFLR Unmodified 1418.7405 0.74054442 67;51 CON__H-INV:HIT000292931;CON__P05787;P05787 KRT8 Keratin, type II cytoskeletal 8 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.12 3 13 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 87.604 87.668 2 1.7699E-97 101261 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 208.25 176.83 + 959460000 1279300 632050 260460 11858000 45702000 78996000 38766000 64588000 55750000 130760000 94518000 97383000 32894000 72311000 233760000 28348 51;67 25893 238422;238423;238424;238425;238426;238427;238428;238429;238430;238431;238432;238433;238434;238435;238436;238437 189553;189554;189555;189556;189557;189558;189559;189560;189561;189562;189563;189564;189565;189566;189567;189568;189569;189570;189571;189572;189573;189574 189558 21 LEGNSPQGSNQGVK Unmodified 1413.6848 0.68482046 1824 P61006 RAB8A Ras-related protein Rab-8A yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.738 12.894 2 1.0765E-60 11445 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 181.68 144.21 115700000 0 0 0 4837900 5871400 13164000 6645700 6012500 8673300 13171000 10693000 14421000 9854800 6758100 15600000 28349 1824 25894 238438;238439;238440;238441;238442;238443;238444;238445;238446;238447;238448;238449 189575;189576;189577;189578;189579;189580 189576 6 LEGNTVGVEAAR Unmodified 1214.6255 0.62551466 1495 P46060 RANGAP1 Ran GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.641 32.889 2 2.4714E-05 35444 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 92.866 29.387 67598000 0 0 0 4415900 0 3856200 5699800 0 3588300 6020300 8039700 9725700 6400900 6815600 13036000 28350 1495 25895 238450;238451;238452;238453;238454;238455;238456;238457;238458;238459;238460;238461 189581;189582;189583;189584;189585;189586;189587;189588;189589;189590;189591 189589 11 LEGPDVSLK Unmodified 956.51786 0.51786169 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50.142 49.077 2 0.0037823 55965 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 88.948 50.815 637720000 4253300 61663000 1779900 32460000 26495000 38437000 51724000 41528000 42861000 35163000 50092000 60133000 66189000 49728000 75214000 28351 2172 25896 238462;238463;238464;238465;238466;238467;238468;238469;238470;238471;238472;238473;238474;238475;238476 189592;189593;189594;189595;189596;189597;189598;189599;189600;189601;189602;189603;189604;189605;189606;189607 189593 16 LEGQAQAEAK Unmodified 1043.5247 0.52473799 167 O00541 PES1 Pescadillo homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 9.3064 9.456 2 0.00042243 8112 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 137.14 83.969 447920000 0 0 0 35186000 43376000 0 46542000 28326000 27233000 38215000 52576000 55607000 37628000 31733000 51501000 28352 167 25897 238477;238478;238479;238480;238481;238482;238483;238484;238485;238486;238487;238488 189608;189609;189610;189611;189612;189613;189614;189615;189616;189617;189618;189619;189620;189621;189622;189623;189624;189625;189626 189610 19 LEGQATAVTPNK Unmodified 1227.6459 0.64591575 4222 Q9BXB4 OSBPL11 Oxysterol-binding protein-related protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 24.167 24.292 2 2.9065E-05 25986 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 123.11 83.067 76753000 0 0 0 3917500 8048500 0 8946500 9626700 4339400 4598900 12272000 0 11988000 13016000 0 28353 4222 25898 238489;238490;238491;238492;238493;238494;238495;238496;238497 189627;189628;189629;189630;189631;189632;189633 189629 6 LEGQGDVPTPK Unmodified 1139.5823 0.58225287 5131 Q9Y2Z0 SUGT1 Suppressor of G2 allele of SKP1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.48 1 2 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 38.131 37.332 2 4.116E-09 40413 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 132.01 113.23 1015400000 22120000 328830000 0 34869000 27949000 64735000 51380000 45128000 35789000 72159000 71168000 61801000 46049000 51142000 102250000 28354 5131 25899 238498;238499;238500;238501;238502;238503;238504;238505;238506;238507;238508;238509;238510;238511;238512;238513 189634;189635;189636;189637;189638;189639;189640;189641;189642;189643;189644;189645;189646;189647;189648;189649;189650;189651 189637 18 LEGQVESYK Unmodified 1051.5186 0.51858998 3174 Q86VS8 HOOK3 Protein Hook homolog 3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 24.94 25.209 2 0.0061887 27092 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 75.738 19.616 7795700 0 0 0 0 0 3045500 0 0 1427600 0 0 0 0 0 3322600 28355 3174 25900 238514;238515;238516;238517 189652;189653 189652 2 LEGQVESYKK Unmodified 1179.6136 0.61355299 3174 Q86VS8 HOOK3 Protein Hook homolog 3 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 21.058 17.288 3 0.021171 21538 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 36.318 22.181 13114000 0 13114000 0 0 0 0 0 0 0 0 0 0 0 0 0 28356 3174 25901 238518;238519 189654 189654 1 LEGSSGGIGER Unmodified 1060.5149 0.51490158 5229 Q9Y5B6 PAXBP1 PAX3- and PAX7-binding protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 18.567 18.766 2 0.0062945 19330 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 56.916 32.284 10332000 0 0 0 1655400 0 0 1255500 0 0 1793300 0 2651400 1573100 1403400 0 28357 5229 25902 238520;238521;238522;238523;238524;238525 189655;189656;189657;189658;189659 189656 3 LEGTEDLSDVLVR Unmodified 1444.7409 0.74093835 2467 Q15003 NCAPH Condensin complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.7 77.855 2 7.97E-42 89827 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 175.86 120.31 279770000 0 0 0 0 0 33498000 18310000 19484000 17080000 37241000 32766000 38269000 0 31350000 51768000 28358 2467 25903 238526;238527;238528;238529;238530;238531;238532;238533;238534;238535;238536;238537 189660;189661;189662;189663;189664;189665;189666;189667;189668;189669;189670;189671;189672;189673;189674;189675 189663 15 LEGTEDLSDVLVRQGD Unmodified 1744.8479 0.84792262 2467 Q15003 NCAPH Condensin complex subunit 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 80.143 75.641 2 8.3484E-131 94195 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 286.34 242.83 1293400000 61335000 1227200000 4851400 0 0 0 0 0 0 0 0 0 0 0 0 28359 2467 25904 238538;238539;238540;238541;238542 189676;189677;189678;189679 189676 4 LEGTPYLCK Unmodified 1079.5321 0.53213155 2435 Q14689 DIP2A Disco-interacting protein 2 homolog A yes yes 0 0 0 By MS/MS 2 0 1 1 49.985 44.279 2 0.0080137 57653 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.318 57.521 45554000 0 45554000 0 0 0 0 0 0 0 0 0 0 0 0 0 28360 2435 25905 238543 189680;189681 189680 2 LEGVAEETDNLQK Unmodified 1444.7046 0.70455285 1187 P25391 LAMA1 Laminin subunit alpha-1 yes yes 0 0 0 By MS/MS 2 0 1 1 47.779 42.216 2 1.4369E-10 54887 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 149.33 102.87 26108000 0 26108000 0 0 0 0 0 0 0 0 0 0 0 0 0 28361 1187 25906 238544 189682;189683 189683 2 LEGVLAEVAQHYQDTLIRAK Unmodified 2253.2117 0.2117307 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 1 By MS/MS 3 0 1 1 92.78 89.551 4 0.016507 107275 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 31.233 22.524 2753900 0 2753900 0 0 0 0 0 0 0 0 0 0 0 0 0 28362 1518 25907 238545 189684 189684 1 LEGVLVNHNEPR Unmodified 1375.7208 0.72081203 3134 Q86TC9 MYPN Myopalladin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 1 2 1 1 2 1 1 2 3 3 3 41.533 41.765 2;3 1.1197E-16 41915 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 113.77 84.427 943220000 0 0 0 63035000 40081000 60768000 67705000 52825000 49933000 65617000 72170000 95042000 147990000 95667000 132380000 28363 3134 25908 238546;238547;238548;238549;238550;238551;238552;238553;238554;238555;238556;238557;238558;238559;238560;238561;238562;238563;238564;238565;238566;238567 189685;189686;189687;189688;189689;189690;189691;189692;189693;189694;189695;189696;189697;189698;189699;189700;189701;189702;189703 189693 6 LEGWLSLPVR Unmodified 1168.6604 0.66044361 455 O75116 ROCK2 Rho-associated protein kinase 2 yes yes 0 0 0 By MS/MS 10 0 1 1 86.659 86.817 2 0.0066244 100426 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.985 39.732 3657400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3657400 28364 455 25909 238568 189704 189704 1 LEHALEK Unmodified 838.45487 0.45486751 1638 P50851 LRBA Lipopolysaccharide-responsive and beige-like anchor protein yes yes 0 0 0 By matching By MS/MS 1.5 0.5 1 1 1 1 48.044 36.643 2 0.031598 46259 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 88.734 10.986 99950000 1041400 0 98908000 0 0 0 0 0 0 0 0 0 0 0 0 28365 1638 25910 238569;238570 189705 189705 1 LEHAYKPVQFEGSLGK Unmodified 1801.9363 0.93628412 3133 Q86TB9 PATL1 Protein PAT1 homolog 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 53.754 53.117 3;4 0.00010115 59328 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 59.345 49.006 214360000 22925000 0 0 4596200 4221500 17202000 8831200 20356000 15988000 0 31093000 35433000 0 18506000 35210000 28366 3133 25911 238571;238572;238573;238574;238575;238576;238577;238578;238579;238580;238581 189706;189707;189708;189709;189710;189711;189712;189713;189714;189715;189716 189715 11 LEHDVNIQFPDK Unmodified 1453.7201 0.72014333 2033 Q00341 HDLBP Vigilin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.038 59.148 3 7.5375E-07 67255 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 96.745 89.02 285710000 0 0 0 11000000 8795600 26562000 18160000 14956000 17965000 25347000 31535000 34586000 14961000 25375000 56467000 28367 2033 25912 238582;238583;238584;238585;238586;238587;238588;238589;238590;238591;238592;238593 189717;189718;189719;189720;189721;189722;189723;189724;189725;189726;189727;189728;189729;189730;189731 189717 15 LEHEISHLK Unmodified 1104.5928 0.59275797 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 19.554 19.446 2 0.0040547 19003 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 98.233 27.377 53288000 0 0 11470000 0 0 3405200 0 0 3081800 7140700 5377800 9083700 7301300 6427400 0 28368 965 25913 238594;238595;238596;238597;238598;238599;238600;238601 189732;189733;189734;189735;189736;189737;189738;189739 189739 8 LEHEVFDAGEVFGIMQVEEVEEEEDEAAREVRK Unmodified 3846.7894 0.78942805 2384 Q14166 TTLL12 Tubulin--tyrosine ligase-like protein 12 yes yes 0 0 2 By MS/MS By matching 2.5 0.5 2 2 3 1 96.883 91.122 4;5 1.0533E-281 115407 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 224.83 218.04 660070000 659180000 888180 0 0 0 0 0 0 0 0 0 0 0 0 0 28369 2384 25914 238602;238603;238604;238605 189740;189741;189742 189741 2 LEHEVFDAGEVFGIMQVEEVEEEEDEAAREVRK Oxidation (M) 3862.7843 0.78434267 2384 Q14166 TTLL12 Tubulin--tyrosine ligase-like protein 12 yes yes 0 1 2 By MS/MS 2 0 2 2 96.259 88.129 4;5 8.4402E-104 113665 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 130.46 129.08 120890000 120890000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28370 2384 25914 238606;238607 189743;189744;189745 189743 3880 3 LEHEVVAR Unmodified 951.51378 0.51377937 4517 Q9HCK8 CHD8 Chromodomain-helicase-DNA-binding protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.006 14.169 2 0.020339 13169 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 62.88 18.113 45595000 0 0 0 2557900 3770700 3399000 3217500 1792800 2371700 4216700 5327100 4846100 4945100 3803300 5346800 28371 4517 25915 238608;238609;238610;238611;238612;238613;238614;238615;238616;238617;238618;238619 189746;189747 189746 2 LEHEYIQNFK Unmodified 1319.651 0.65100113 2564 Q15691 MAPRE1 Microtubule-associated protein RP/EB family member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 6.74 3.84 6 2 11 3 3 2 1 1 1 1 1 1 1 1 1 1 1 47.108 44.836 2;3 4.6469E-172 62651 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 264.62 226.89 2425400000 671610000 559890000 804410000 0 27736000 44268000 26969000 34621000 16764000 32626000 37962000 27283000 29829000 32752000 78673000 28372 2564 25916 238620;238621;238622;238623;238624;238625;238626;238627;238628;238629;238630;238631;238632;238633;238634;238635;238636;238637;238638 189748;189749;189750;189751;189752;189753;189754;189755;189756;189757;189758;189759;189760;189761;189762;189763;189764;189765;189766;189767;189768;189769;189770;189771;189772;189773 189762 21 LEHLTGNK Unmodified 910.48723 0.48723027 2296 Q13464 ROCK1 Rho-associated protein kinase 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 4 3.46 3 1 1 1 1 1 12.996 9.7936 2 0.0070885 12373 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 138.54 49.81 95396000 61636000 16345000 17415000 0 0 0 0 0 0 0 0 0 0 0 0 28373 2296 25917 238639;238640;238641;238642 189774;189775 189774 2 LEHTAQTYSELQGER Unmodified 1760.8329 0.83294126 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.262 36.443 3 1.0109E-21 40219 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 96.414 79.195 202010000 0 0 0 9438200 8924900 18543000 16144000 12904000 8836300 15035000 16164000 22438000 18531000 26691000 28365000 28374 619 25918 238643;238644;238645;238646;238647;238648;238649;238650;238651;238652;238653;238654 189776;189777;189778;189779;189780;189781;189782;189783;189784;189785;189786;189787;189788;189789;189790 189784 15 LEHVVEEEK Unmodified 1110.5557 0.55570376 1424 P40937 RFC5 Replication factor C subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.555 15.725 2 5.2547E-20 15689 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 172.23 127.88 269930000 0 0 0 11918000 10220000 13012000 12946000 10198000 11712000 20521000 30006000 39989000 31828000 31103000 46474000 28375 1424 25919 238655;238656;238657;238658;238659;238660;238661;238662;238663;238664;238665;238666 189791;189792;189793;189794;189795;189796;189797;189798;189799;189800;189801 189794 11 LEICNLTPDALK Unmodified 1385.7225 0.72245152 841 P07384 CAPN1 Calpain-1 catalytic subunit yes yes 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.646 79.704 2 0.0098477 91377 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 47.228 30.51 55295000 0 0 0 3230900 3405300 2898000 3713800 3829700 2919200 3135000 6092200 6034400 3866900 4997700 11172000 28376 841 25920 238667;238668;238669;238670;238671;238672;238673;238674;238675;238676;238677;238678 189802 189802 1 LEICNLTPDTLTSDTYK Unmodified 1982.9507 0.95067313 1057 P17655 CAPN2 Calpain-2 catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 81.896 82 2 1.0324E-24 94937 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 104.87 88.613 44128000 0 0 0 0 1770700 3965300 1509700 2551500 2421300 4447300 4615400 5897100 2536600 4894300 9519300 28377 1057 25921 238679;238680;238681;238682;238683;238684;238685;238686;238687;238688;238689 189803;189804;189805;189806;189807;189808;189809;189810;189811;189812 189804 10 LEICNLTPDTLTSDTYKK Unmodified 2111.0456 0.045636149 1057 P17655 CAPN2 Calpain-2 catalytic subunit yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 77.014 77.196 3 0.0012327 89085 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 52.612 42.824 47822000 0 0 0 0 0 0 0 0 0 7698900 7528500 7324200 0 7287900 17982000 28378 1057 25922 238690;238691;238692;238693;238694 189813 189813 0 LEIDDLTR Unmodified 973.50803 0.50802529 5316 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 53.396 53.494 2 0.0082464 60958 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 86.866 3.2519 + 144630000 0 0 0 0 20279000 0 27793000 0 0 39697000 0 56860000 0 0 0 28379 5316 25923 238695;238696;238697;238698 189814;189815;189816;189817 189815 3 LEILQQQLQVANEAR Unmodified 1751.953 0.95299681 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 78.035 78.183 2 5.5473E-23 90110 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 143.17 136.28 72071000 0 0 0 0 0 6373300 4155000 4542100 5277700 9458800 10307000 10641000 3901400 4501900 12913000 28380 2459 25924 238699;238700;238701;238702;238703;238704;238705;238706;238707;238708;238709 189818;189819;189820;189821;189822;189823;189824;189825;189826;189827;189828 189820 11 LEILSGDHEQR Unmodified 1295.647 0.64697839 2684 Q4G0J3 LARP7 La-related protein 7 yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 38.2 38.561 2 0.0049396 41560 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.347 29.902 25989000 0 0 0 0 0 0 0 2511600 0 4090400 6255900 0 3731900 4020800 5378200 28381 2684 25925 238710;238711;238712;238713;238714;238715;238716 189829;189830;189831 189829 3 LEIPGSRLEQEEPLTDAER Unmodified 2181.0913 0.091340788 2738 Q5JTD0 TJAP1 Tight junction-associated protein 1 yes yes 0 0 1 By MS/MS 10 0 1 1 73.652 73.991 3 8.1103E-06 84800 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.814 34.276 14450000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14450000 28382 2738 25926 238717 189832 189832 1 LEISDEFSEAIGALRGHEDK Unmodified 2215.0757 0.075690724 4777 Q9NZN4 EHD2 EH domain-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 2 2 3 1 92.916 87.164 3;4 2.7362E-165 111345 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 188.84 159.5 148500000 142720000 5781400 0 0 0 0 0 0 0 0 0 0 0 0 0 28383 4777 25927 238718;238719;238720;238721 189833;189834;189835;189836 189836 4 LEITMLSQGVSMLYSFFMPAAK Unmodified 2463.2252 0.22519719 1137 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0.816 1 1 1 1 2 107.12 106.07 3 1.5001E-10 95622 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 76.015 65.513 20186000 12118000 8067600 0 0 0 0 0 0 0 0 0 0 0 0 0 28384 1137 25928 238722;238723;238724 189837;189838;189839 189839 3 LEITTQHIYFYDGSIEK Unmodified 2056.0153 0.015322298 3009 Q6ZS30 NBEAL1 Neurobeachin-like protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 40.612 37.002 3 0.017192 46793 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 24.287 7.981 4717800 0 0 4717800 0 0 0 0 0 0 0 0 0 0 0 0 28385 3009 25929 238725 189840 189840 1 LEIYISEGTHSTEEDINK Unmodified 2076.9851 0.98514438 4410 Q9H5X1 FAM96A MIP18 family protein FAM96A yes yes 0 0 0 By MS/MS 2 0 1 1 72.631 64.393 3 2.2603E-05 85473 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.97 58.27 13963000 13963000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28386 4410 25930 238726 189841 189841 1 LEIYQSSQDEPIALDK Unmodified 1847.9153 0.9152739 3930 Q96MY1 NOL4L Nucleolar protein 4-like yes yes 0 0 0 By MS/MS 10 0 1 1 74.432 74.66 2 0.00018799 86127 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 81.431 61.773 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28387 3930 25931 238727 189842 189842 1 LEKPETQSSPITVQSSK Unmodified 1857.9684 0.96837211 3775 Q96CB8 INTS12 Integrator complex subunit 12 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 38.408 38.681 3 0.0031312 43215 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 40.962 38.575 66123000 0 0 0 0 4634600 5869200 0 4909800 0 7284000 11162000 11289000 7174800 6110200 7689900 28388 3775 25932 238728;238729;238730;238731;238732;238733;238734;238735;238736 189843;189844;189845;189846 189846 4 LELDILPLQEANAELSEK Unmodified 2024.0678 0.067751799 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.44 0.497 5 4 4 4 1 97.003 92.354 2;3 9.8059E-81 115003 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 188.4 159.07 921170000 193000000 711490000 16680000 0 0 0 0 0 0 0 0 0 0 0 0 28389 965 25933 238737;238738;238739;238740;238741;238742;238743;238744;238745 189847;189848;189849;189850;189851;189852;189853;189854;189855 189847 9 LELDIPDDAK Unmodified 1127.571 0.57101948 2529 Q15398 DLGAP5 Disks large-associated protein 5 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 73.995 68.84 2 0.0072196 86390 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.787 55.969 53250000 0 53250000 0 0 0 0 0 0 0 0 0 0 0 0 0 28390 2529 25934 238746;238747 189856;189857 189856 2 LELEITDSK Unmodified 1046.5496 0.54955575 430 O60763 USO1 General vesicular transport factor p115 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 5 3.56 1 1 1 1 1 1 60.521 56.837 2 0.0077063 72454 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.802 70.701 69181000 453790 64897000 0 0 0 3830500 0 0 0 0 0 0 0 0 0 28391 430 25935 238748;238749;238750 189858;189859 189859 1 LELEQTYQAK Unmodified 1221.6241 0.62411768 2094 Q03252 LMNB2 Lamin-B2 yes yes 0 0 0 By MS/MS 2 0 1 1 49.374 43.69 2 0.0042159 56847 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.55 40.06 23765000 0 23765000 0 0 0 0 0 0 0 0 0 0 0 0 0 28392 2094 25936 238751 189860;189861 189861 2 LELETTLK Unmodified 945.53826 0.53826279 4077 Q99996 AKAP9 A-kinase anchor protein 9 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 61.196 55.857 2 0.028065 71583 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.923 31.087 30426000 0 30426000 0 0 0 0 0 0 0 0 0 0 0 0 0 28393 4077 25937 238752;238753 189862 189862 1 LELFLPEEYPMAAPK Oxidation (M) 1762.8852 0.88515975 1833 P61088 UBE2N Ubiquitin-conjugating enzyme E2 N yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.76 2.85 3 1 21 1 2 1 2 2 2 2 2 1 2 2 1 2 2 1 87.994 87.293 2;3 2.6194E-07 101338 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 88.441 72.551 1407300000 43459000 866480000 26288000 7582300 17405000 64040000 27369000 25362000 25300000 82660000 46277000 35845000 25732000 36562000 76965000 28394 1833 25938 238754;238755;238756;238757;238758;238759;238760;238761;238762;238763;238764;238765;238766;238767;238768;238769;238770;238771;238772;238773;238774;238775;238776;238777;238778 189863;189864;189865;189866;189867;189868;189869;189870;189871;189872;189873;189874;189875;189876;189877;189878;189879;189880 189865 2972 18 LELFLPEEYPMAAPK Unmodified 1746.8902 0.89024513 1833 P61088 UBE2N Ubiquitin-conjugating enzyme E2 N yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 92.508 91.271 2 2.7506E-06 113611 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.87 97.631 1344200000 41064000 1249400000 12458000 0 0 2957900 834590 2198600 1694800 6310500 3931300 2129100 745460 2289800 18178000 28395 1833 25938 238779;238780;238781;238782;238783;238784;238785;238786;238787;238788;238789;238790;238791;238792 189881;189882;189883;189884;189885;189886;189887;189888;189889;189890;189891;189892;189893;189894;189895;189896 189884 16 LELFTSR Unmodified 864.47052 0.47051757 3326;4935 Q8N3U4;Q9UJ98 STAG2;STAG3 Cohesin subunit SA-2;Cohesin subunit SA-3 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 58.243 58.43 2 0.023601 65736 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 92.822 20.97 141410000 0 0 0 0 5939500 15184000 7640700 7940800 8497300 17381000 11483000 13455000 13918000 15945000 24024000 28396 3326;4935 25939 238793;238794;238795;238796;238797;238798;238799;238800;238801;238802;238803 189897;189898;189899;189900 189899 4 LELGNDWDSATK Unmodified 1347.6307 0.63065962 4969 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 62.939 63.242 2 0.0013151 71402 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 68.893 28.892 14638000 0 0 0 0 0 0 0 0 0 3294900 0 0 0 3712400 7630600 28397 4969 25940 238804;238805;238806 189901;189902 189902 2 LELLHPIIPEQSTFK Unmodified 1763.9822 0.98217168 5131 Q9Y2Z0 SUGT1 Suppressor of G2 allele of SKP1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.56 3.62 4 1 11 3 2 1 1 1 1 1 1 1 1 1 1 1 85.38 83.413 3 1.7077E-19 96385 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 110.44 89.166 825800000 415790000 13873000 0 2974000 0 27663000 7497300 19352000 20612000 38799000 32339000 28252000 16307000 25033000 177310000 28398 5131 25941 238807;238808;238809;238810;238811;238812;238813;238814;238815;238816;238817;238818;238819;238820;238821;238822 189903;189904;189905;189906;189907;189908;189909;189910;189911;189912;189913;189914;189915;189916;189917 189904 14 LELLLQK Unmodified 855.54295 0.54295423 3326;3563 Q8N3U4;Q8WVM7 STAG2;STAG1 Cohesin subunit SA-2;Cohesin subunit SA-1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.08 67.164 2 0.023423 76833 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 85.89 0 75565000 0 0 0 3722100 3615600 8966500 5398100 3779900 3785400 7533600 7051400 8098200 4702200 6528700 12383000 28399 3326;3563 25942 238823;238824;238825;238826;238827;238828;238829;238830;238831;238832;238833;238834 189918;189919;189920;189921;189922 189918 5 LELLVGSPASCMELELYGVDDK Unmodified 2437.1757 0.17566404 4006 Q99426 TBCB Tubulin-folding cofactor B yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 97.647 91.825 3 2.5127E-27 116045 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 113.26 102.57 31898000 31898000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28400 4006 25943 238835;238836 189923;189924 189924 2 LELNSMQEQLIQAQNTLK Unmodified 2100.0885 0.088504016 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 0 By MS/MS 2 0 2 2 90.594 85.698 2;3 1.7623E-23 106481 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 169.66 153.53 230400000 0 230400000 0 0 0 0 0 0 0 0 0 0 0 0 0 28401 2495 25944 238837;238838 189925;189926 189926 1 LELPADLLR Unmodified 1038.6073 0.6073454 3938 Q96NU1 SAMD11 Sterile alpha motif domain-containing protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 85.051 85.117 2 0.0052698 98195 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.334 26.48 147560000 0 0 0 6244500 10147000 10960000 10809000 14051000 9838600 14711000 15031000 16268000 8635600 10484000 20377000 28402 3938 25945 238839;238840;238841;238842;238843;238844;238845;238846;238847;238848;238849;238850 189927;189928;189929;189930;189931;189932 189928 6 LELQENQK Unmodified 1000.5189 0.51892433 5317 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching 8.22 3.33 2 7 2 2 1 1 2 1 45.991 45.146 2 0.016764 17503 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.584 17.098 + 506160000 0 463510000 0 15171000 1692000 4403200 0 15947000 0 0 0 5436800 0 0 0 28403 5317 25946 238851;238852;238853;238854;238855;238856;238857;238858;238859 189933;189934;189935 189933 3 LELQFPR Unmodified 901.50215 0.50215205 1549 P48681 NES Nestin yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching 10 0 7 1 1 1 1 1 1 1 72.541 72.556 2 0.029815 83400 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 75.311 32.31 36469000 0 0 0 2013100 2181900 0 2839400 0 0 5656100 0 8959900 6977000 0 7841900 28404 1549 25947 238860;238861;238862;238863;238864;238865;238866 189936 189936 1 LELQGPR Unmodified 811.4552 0.45520186 1085 P19338 NCL Nucleolin yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS 10 0 17 2 1 2 1 1 1 2 2 2 2 1 33.603 33.809 2 0.016524 37834 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 115.78 57.967 249770000 0 0 0 21833000 16122000 15684000 3720700 3320900 0 4142600 34963000 48314000 20228000 23389000 58058000 28405 1085 25948 238867;238868;238869;238870;238871;238872;238873;238874;238875;238876;238877;238878;238879;238880;238881;238882;238883 189937;189938;189939 189939 3 LELQGVK Unmodified 785.4647 0.46470391 4506 Q9HC38 GLOD4 Glyoxalase domain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.3 2.1 1 9 1 1 1 1 1 1 1 1 1 1 37.455 37.231 2 0.023371 39933 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.734 8.3571 117170000 0 30887000 0 7203500 0 0 2917000 2401900 0 10924000 10013000 10401000 3344700 11087000 27994000 28406 4506 25949 238884;238885;238886;238887;238888;238889;238890;238891;238892;238893 189940;189941;189942;189943;189944;189945 189940 6 LELQNVPR Unmodified 967.54508 0.5450795 3291 Q8IZ69 TRMT2A tRNA (uracil-5-)-methyltransferase homolog A yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 47.583 47.87 2 0.018051 54020 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 64.757 32.287 28321000 0 0 0 0 0 0 5171200 0 3479500 6031700 0 0 7031900 0 6607200 28407 3291 25950 238894;238895;238896;238897;238898 189946;189947 189947 2 LELSDNIISGGLEVLAEK Unmodified 1899.0201 0.020073325 4149 Q9BTT0 ANP32E Acidic leucine-rich nuclear phosphoprotein 32 family member E yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.36 0.481 7 4 4 5 2 98.183 93.727 2;3 1.4213E-64 116688 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 213.52 166.24 828270000 267920000 545970000 14378000 0 0 0 0 0 0 0 0 0 0 0 0 28408 4149 25951 238899;238900;238901;238902;238903;238904;238905;238906;238907;238908;238909 189948;189949;189950;189951;189952;189953;189954;189955;189956;189957;189958 189955 9 LELSDNRVSGGLEVLAEK Unmodified 1928.0215 0.021470309 1404 P39687 ANP32A Acidic leucine-rich nuclear phosphoprotein 32 family member A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 2 1 1 82.123 77.347 3 0.00022973 98368 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.298 30.351 51942000 34924000 14545000 2472400 0 0 0 0 0 0 0 0 0 0 0 0 28409 1404 25952 238910;238911;238912;238913 189959;189960;189961;189962 189961 4 LELSFSK Unmodified 822.44872 0.4487195 2264 Q13287 NMI N-myc-interactor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 64.252 58.264 2 0.021122 74729 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.63 31.18 71689000 8767000 58921000 4001700 0 0 0 0 0 0 0 0 0 0 0 0 28410 2264 25953 238914;238915;238916 189963;189964 189963 2 LELSVLYK Unmodified 963.56408 0.56408361 3840 Q96FW1 OTUB1 Ubiquitin thioesterase OTUB1 yes yes 0 0 0 By MS/MS 10 0 1 1 75.407 75.719 2 0.049549 86955 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.082 23.773 9491600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9491600 28411 3840 25954 238917 189965 189965 1 LELSWYHTAGKNLDQVEVAVVR Unmodified 2526.3231 0.32307206 5310 yes yes 0 0 1 By MS/MS 2 0 1 1 95.239 87.109 4 0.031051 112659 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 13.608 6.9609 + 9477200 9477200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28412 5310 25955 238918 189966 189966 1 LELYSNRDSDDK Unmodified 1453.6685 0.66850169 3620 Q92544 TM9SF4 Transmembrane 9 superfamily member 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 30.452 30.505 3 0.0039877 33550 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 52.693 23.352 20973000 0 0 0 3101200 1800500 0 0 3562500 0 6165900 0 0 0 0 6342500 28413 3620 25956 238919;238920;238921;238922;238923 189967;189968;189969 189969 3 LEMEGITVK Unmodified 1018.5369 0.53688258 3041 Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 61.82 61.882 2 0.0069711 71686 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 73.665 11.006 142340000 0 0 0 11183000 9836900 0 13081000 8862600 6951400 13440000 23728000 20262000 15020000 19978000 0 28414 3041 25957 238924;238925;238926;238927;238928;238929;238930;238931;238932;238933;238934 189970;189971;189972;189973;189974 189974 5 LEMEMEAAR 2 Oxidation (M) 1110.4685 0.46854502 2508 Q15233 NONO Non-POU domain-containing octamer-binding protein yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 2 1 1 1 1 10.955 11.088 2 0.0041831 9871 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 60.59 50.176 13335000 0 0 0 0 0 1312800 4591100 0 1036500 0 0 0 2554100 1433700 2407100 28415 2508 25958 238935;238936;238937;238938;238939;238940;238941 189975;189976;189977;189978;189979 189976 4119;4120 3 LEMENQSLTK Unmodified 1191.5805 0.58053831 2676 Q3V6T2 CCDC88A Girdin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 37.654 37.837 2 0.0035551 42121 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 76.064 40.769 20253000 0 0 0 0 2053500 2775600 2561800 2433500 0 0 4800100 1654500 0 3973600 0 28416 2676 25959 238942;238943;238944;238945;238946;238947;238948;238949;238950 189980;189981;189982;189983;189984;189985;189986;189987 189980 8 LEMEVLENLQELK Oxidation (M) 1602.8175 0.81747411 4205 Q9BW85 CCDC94 Coiled-coil domain-containing protein 94 yes yes 0 1 0 By MS/MS By matching 2.33 0.471 2 1 2 1 84.711 81.227 2 0.0027445 100885 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.094 48.855 29793000 0 28123000 1669800 0 0 0 0 0 0 0 0 0 0 0 0 28417 4205 25960 238951;238952;238953 189988;189989 189988 5680 2 LEMEVLENLQELK Unmodified 1586.8226 0.82255949 4205 Q9BW85 CCDC94 Coiled-coil domain-containing protein 94 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 93.581 90.055 2 2.3145E-25 111961 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 158.05 124.3 60793000 0 60340000 452740 0 0 0 0 0 0 0 0 0 0 0 0 28418 4205 25960 238954;238955;238956;238957 189990;189991;189992 189990 3 LEMIGFK Oxidation (M) 852.44153 0.44152563 2443 Q14746 COG2 Conserved oligomeric Golgi complex subunit 2 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 53.633 48.282 2 0.034155 62870 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.381 50.713 11528000 0 11528000 0 0 0 0 0 0 0 0 0 0 0 0 0 28419 2443 25961 238958;238959 189993 189993 1 LEMLEEMER 2 Oxidation (M) 1210.521 0.52097452 5377 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 2 1 1 1 1 1 40.697 41.046 2 0.013022 45978 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 44.447 27.061 + 48835000 0 0 0 0 0 11060000 5119900 0 0 0 5920700 9537600 7623600 0 9572800 28420 5377 25962 238960;238961;238962;238963;238964;238965;238966 189994 189994 6755;6756 1 LEMLGAEK Unmodified 889.4579 0.45790397 4461 Q9H944 MED20 Mediator of RNA polymerase II transcription subunit 20 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 40.629 41.282 2 0.047929 44767 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.657 0.84441 28521000 0 0 0 0 0 0 0 0 0 0 7620500 6509500 0 0 14391000 28421 4461 25963 238967;238968;238969 189995 189995 1 LEMYNILK Unmodified 1022.5471 0.54705333 1209 P26639 TARS Threonine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.464 76.511 2 0.0064875 87569 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.45 70.266 263430000 0 0 0 3086500 4601900 7180700 5368000 6846000 0 9162800 39191000 32394000 7181100 956150 147460000 28422 1209 25964 238970;238971;238972;238973;238974;238975;238976;238977;238978;238979;238980 189996;189997;189998;189999;190000;190001;190002 189999 7 LENAGGDLK Unmodified 915.46616 0.46616048 1612 P49915 GMPS GMP synthase [glutamine-hydrolyzing] yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 17.197 16.457 2 0.0031256 15771 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 91.069 1.3951 1733900000 2246900 1312000000 10378000 11563000 8725400 47011000 18724000 12976000 11413000 39748000 46681000 52216000 25892000 46710000 87633000 28423 1612 25965 238981;238982;238983;238984;238985;238986;238987;238988;238989;238990;238991;238992;238993;238994;238995;238996 190003;190004;190005;190006;190007;190008;190009;190010;190011;190012;190013;190014;190015;190016;190017;190018 190013 9 LENCNYAVELGK Unmodified 1408.6657 0.66566492 986;985 P13797;P13796 PLS3;LCP1 Plastin-3;Plastin-2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.55 1 1 4 2 1 1 1 1 55.78 53.382 2 3.6405E-18 68086 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 158.08 0 359180000 0 339270000 0 0 0 0 0 0 0 0 5822700 0 0 0 14093000 28424 986;985 25966 238997;238998;238999;239000;239001;239002 190019;190020;190021;190022;190023;190024;190025 190021 6 LENDGSRKPGVIDK Unmodified 1526.8053 0.80526994 3311 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 yes yes 0 0 2 By matching By MS/MS 2 0 2 1 1 21.29 17.485 4 0.013772 22351 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 50.897 30.04 45037000 21644000 0 23392000 0 0 0 0 0 0 0 0 0 0 0 0 28425 3311 25967 239003;239004 190026 190026 1 LENDIAEIMK Oxidation (M) 1190.5853 0.58528933 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 1 0 By MS/MS 2.5 0.5 2 2 4 52.322 46.983 2 0.0022808 60452 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.62 77.803 95979000 0 95979000 0 0 0 0 0 0 0 0 0 0 0 0 0 28426 1286 25968 239005;239006;239007;239008 190027;190028;190029 190027 1893 3 LENDIAEIMK Unmodified 1174.5904 0.59037471 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 72.219 71.731 2 1.1568E-05 89660 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.68 77.499 405690000 0 318520000 2530100 4939300 4037900 5037100 4054100 3691000 3074400 7513200 9347100 11023000 5883200 8431600 17600000 28427 1286 25968 239009;239010;239011;239012;239013;239014;239015;239016;239017;239018;239019;239020;239021;239022;239023 190030;190031;190032;190033 190030 4 LENDQIESLR Unmodified 1215.6095 0.60953025 1779 P56192 MARS Methionine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.913 46.083 2 1.4052E-54 50642 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 195.57 126.79 554940000 0 0 0 24376000 29863000 58580000 37696000 29834000 28612000 56486000 56977000 59145000 56280000 44483000 72608000 28428 1779 25969 239024;239025;239026;239027;239028;239029;239030;239031;239032;239033;239034;239035 190034;190035;190036;190037;190038;190039;190040;190041;190042;190043;190044;190045 190037 12 LENDQIESLRQR Unmodified 1499.7692 0.76921879 1779 P56192 MARS Methionine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 39.854 40 3 0.0086817 44450 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 36.284 1.0805 24978000 0 0 0 0 0 0 0 0 8756000 16222000 0 0 0 0 0 28429 1779 25970 239036;239037 190046;190047 190047 2 LENEGSDEDIETDVLYSPQMALK Unmodified 2595.1898 0.18979378 405 O60502 MGEA5 Protein O-GlcNAcase yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 88.565 84.245 2;3 1.2024E-80 104680 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 178.12 151.5 64939000 0 64939000 0 0 0 0 0 0 0 0 0 0 0 0 0 28430 405 25971 239038;239039;239040 190048;190049 190049 2 LENEIQTYR Unmodified 1164.5775 0.57750184 72;57 CON__P13645;P13645;CON__P02535-1 KRT10 Keratin, type I cytoskeletal 10 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 2 2 2 2 1 1 1 2 2 2 37.963 38.103 2 1.4129E-136 42141 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 227.3 174.58 + 7950300000 0 0 0 1403900000 427370000 566180000 441110000 869610000 338410000 750210000 573970000 956790000 742120000 445830000 434870000 28431 72;57 25972 239041;239042;239043;239044;239045;239046;239047;239048;239049;239050;239051;239052;239053;239054;239055;239056;239057;239058;239059;239060;239061 190050;190051;190052;190053;190054;190055;190056;190057;190058;190059;190060;190061;190062;190063;190064;190065;190066;190067;190068;190069 190067 20 LENELASK Unmodified 902.47091 0.4709115 460 O75145 PPFIA3 Liprin-alpha-3 yes yes 0 0 0 By MS/MS 3 0 1 1 18.171 14.514 2 0.039421 18507 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 70.912 3.919 137490000 0 137490000 0 0 0 0 0 0 0 0 0 0 0 0 0 28432 460 25973 239062 190070 190070 1 LENELASKESLYRQSEEK Unmodified 2152.0648 0.064791686 460 O75145 PPFIA3 Liprin-alpha-3 yes yes 0 0 2 By MS/MS By matching 2 0 2 1 1 80.014 76.375 3 0.04574 94775 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 34.395 18.089 68982000 0 63568000 5413100 0 0 0 0 0 0 0 0 0 0 0 0 28433 460 25974 239063;239064 190071 190071 0 LENGELEHIRPK Unmodified 1433.7627 0.76267685 2497 Q15102 PAFAH1B3 Platelet-activating factor acetylhydrolase IB subunit gamma yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 36.709 36.851 3 8.61E-05 40404 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 87.001 70.228 94031000 0 0 0 3957000 2157100 0 4711200 4470500 2968500 9153500 12659000 0 7753700 9122800 37077000 28434 2497 25975 239065;239066;239067;239068;239069;239070;239071;239072;239073;239074;239075 190072;190073;190074;190075;190076;190077;190078;190079;190080;190081 190078 9 LENGGFPYEK Unmodified 1152.5451 0.54513908 4117 Q9BRT3 MIEN1 Migration and invasion enhancer 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 6 4 2 2 1 1 1 1 47.25 45.075 2 7.3782E-06 57838 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.38 103.65 306420000 0 285940000 3968000 0 0 0 0 5123300 0 0 0 0 0 0 11386000 28435 4117 25976 239076;239077;239078;239079 190082;190083;190084;190085 190082 3 LENGGLVR Unmodified 856.47667 0.47666558 2835 Q5W0B1 RNF219 RING finger protein 219 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 25.269 25.518 2 0.029462 27194 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 56.122 2.4121 26240000 0 0 0 0 0 0 0 19842000 0 0 0 0 0 6397500 0 28436 2835 25977 239080;239081 190086;190087 190086 2 LENIGMEPLEK Oxidation (M) 1287.6381 0.63805318 3951 Q96Q05 TRAPPC9 Trafficking protein particle complex subunit 9 yes yes 0 1 0 By MS/MS 2 0 1 1 52.797 47.024 2 0.01087 60814 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.654 38.549 25884000 0 25884000 0 0 0 0 0 0 0 0 0 0 0 0 0 28437 3951 25978 239082 190088 190088 5439 1 LENIGMEPLEK Unmodified 1271.6431 0.64313856 3951 Q96Q05 TRAPPC9 Trafficking protein particle complex subunit 9 yes yes 0 0 0 By MS/MS 2 0 1 1 69.467 63.598 2 0.031772 81127 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.627 24.633 68750000 0 68750000 0 0 0 0 0 0 0 0 0 0 0 0 0 28438 3951 25978 239083 190089 190089 1 LENIISTLK Unmodified 1029.607 0.60701105 3970 Q96RL7 VPS13A Vacuolar protein sorting-associated protein 13A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 2 1 1 1 1 1 1 1 1 1 1 1 70.935 70.961 2 0.0042902 81534 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 87.308 33.15 74034000 0 0 0 3219100 6651000 0 6031200 5460200 4607600 7137900 8843900 8969900 6269700 8670000 8173200 28439 3970 25979 239084;239085;239086;239087;239088;239089;239090;239091;239092;239093;239094;239095;239096 190090;190091;190092;190093;190094;190095;190096;190097;190098;190099;190100;190101 190096 12 LENIIVTDVDPK Unmodified 1354.7344 0.73439641 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.333 72.404 2 2.843E-05 83521 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 97.214 33.931 414130000 0 0 0 23336000 31345000 27352000 26059000 47166000 25654000 41021000 36052000 57697000 34974000 27674000 35795000 28440 3023 25980 239097;239098;239099;239100;239101;239102;239103;239104;239105;239106;239107;239108 190102;190103;190104;190105;190106;190107;190108;190109;190110;190111;190112;190113;190114;190115 190103 14 LENLFEALNNK Unmodified 1303.6772 0.67721588 1310 P31944 CASP14 Caspase-14;Caspase-14 subunit p17, mature form;Caspase-14 subunit p10, mature form;Caspase-14 subunit p20, intermediate form;Caspase-14 subunit p8, intermediate form yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83.469 83.349 2 1.2405E-127 95527 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 223.84 174.02 1010900000 176400 0 6212100 238370000 31366000 53892000 40245000 79048000 41813000 82408000 105620000 142070000 52612000 54156000 82872000 28441 1310 25981 239109;239110;239111;239112;239113;239114;239115;239116;239117;239118;239119;239120;239121;239122 190116;190117;190118;190119;190120;190121;190122 190120 6 LENLGIPEEELLR Unmodified 1523.8195 0.81952302 2060 Q01658 DR1 Protein Dr1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 84.25 84.386 2 1.0678E-12 97479 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 130.01 108.54 89403000 0 0 0 0 0 9384500 0 9569100 5229200 14145000 12404000 13346000 5769300 6475500 13080000 28442 2060 25982 239123;239124;239125;239126;239127;239128;239129;239130;239131;239132 190123;190124;190125;190126;190127;190128;190129;190130;190131;190132;190133;190134 190128 12 LENLLQQVSAEDFEKQNEEAR Unmodified 2489.2034 0.20341043 3439 Q8NF50 DOCK8 Dedicator of cytokinesis protein 8 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 67.108 67.35 3 0.020848 76566 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 23.726 12.737 41114000 0 0 0 0 0 10693000 0 3892800 0 0 8741100 0 0 0 17787000 28443 3439 25983 239133;239134;239135;239136 190135 190135 1 LENLMLDK Oxidation (M) 990.50558 0.50558245 1305;1304 P31749;Q9Y243;P31751 AKT1;AKT3;AKT2 RAC-alpha serine/threonine-protein kinase;RAC-gamma serine/threonine-protein kinase;RAC-beta serine/threonine-protein kinase no no 0 1 0 By MS/MS 2 0 1 1 48.91 43.262 2 0.01053 56200 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.64 60.141 72643000 0 72643000 0 0 0 0 0 0 0 0 0 0 0 0 0 28444 1304;1305 25984 239137 190136 190136 1926 1 LENLPDTEDQETVDINSVSEGK Unmodified 2431.1238 0.12382271 4365 Q9H2G2 SLK STE20-like serine/threonine-protein kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 72.569 71.545 2;3 7.6121E-72 83079 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 127.88 122.99 94011000 12033000 18770000 0 0 3441200 7348500 3993600 3053700 3803200 9247100 9555600 11937000 4273400 6554800 0 28445 4365 25985 239138;239139;239140;239141;239142;239143;239144;239145;239146;239147;239148;239149 190137;190138;190139;190140;190141;190142;190143;190144;190145;190146;190147 190142 10 LENNDNKPVTNSR Unmodified 1499.7328 0.73283328 3120;4251 Q7Z739;Q9BYJ9 YTHDF3;YTHDF1 YTH domain-containing family protein 3;YTH domain-containing family protein 1 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.7781 7.9054 3 2.7194E-25 6407 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 151.44 139.46 1217600000 0 0 0 46318000 31596000 38625000 65628000 46841000 71547000 106460000 299000000 155420000 97469000 114040000 144660000 28446 3120;4251 25986 239150;239151;239152;239153;239154;239155;239156;239157;239158;239159;239160;239161 190148;190149;190150;190151;190152;190153;190154;190155;190156;190157;190158 190156 11 LENNDNKPVTNSRDTQEVPLEK Unmodified 2539.2514 0.25142326 3120;4251 Q7Z739;Q9BYJ9 YTHDF3;YTHDF1 YTH domain-containing family protein 3;YTH domain-containing family protein 1 no no 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 2 1 2 2 2 2 2 1 1 1 2 36.079 36.258 3;4 4.1908E-08 39997 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 61.767 53.843 224230000 0 0 0 10469000 12519000 10142000 22620000 18749000 16133000 23768000 24662000 11528000 12749000 19669000 41221000 28447 3120;4251 25987 239162;239163;239164;239165;239166;239167;239168;239169;239170;239171;239172;239173;239174;239175;239176;239177;239178;239179;239180 190159;190160;190161;190162;190163;190164;190165;190166;190167;190168;190169;190170;190171;190172;190173;190174;190175 190170 17 LENNENKPVTNSR Unmodified 1513.7485 0.74848335 5227 Q9Y5A9 YTHDF2 YTH domain-containing family protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 8.318 8.4437 3 7.4392E-09 5762 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 119.39 96.665 314890000 0 0 0 16009000 10711000 11884000 16268000 9031400 13336000 22843000 66551000 35418000 27320000 29509000 56013000 28448 5227 25988 239181;239182;239183;239184;239185;239186;239187;239188;239189;239190;239191;239192 190176;190177;190178;190179;190180;190181;190182;190183;190184;190185 190179 6 LENNENKPVTNSRDTQEVPLEK Unmodified 2553.2671 0.26707332 5227 Q9Y5A9 YTHDF2 YTH domain-containing family protein 2 yes yes 0 0 2 By matching By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 35.799 36.097 4 0.022912 39886 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 23.509 15.321 39738000 0 0 0 0 0 2353400 0 0 4330700 6862400 5180000 0 0 0 21012000 28449 5227 25989 239193;239194;239195;239196;239197 190186;190187 190186 2 LENQEGIDFIK Unmodified 1304.6612 0.66123147 3256 Q8IX90 SKA3 Spindle and kinetochore-associated protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 2 1 1 1 1 1 1 1 82.01 81.975 2 0.013096 98721 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 46.891 16.321 32968000 0 0 0 13284000 2168200 2869700 2285300 3966300 0 3104800 3333200 0 1956100 0 0 28450 3256 25990 239198;239199;239200;239201;239202;239203;239204;239205;239206 190188;190189 190189 2 LENRQEARPEPAR Unmodified 1564.807 0.80700128 1766 P55265 ADAR Double-stranded RNA-specific adenosine deaminase yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 2 2 2 2 2 2 9.4298 9.5429 3;4 0.016275 7108 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.219 32.782 127180000 0 0 0 8524100 8078700 6936900 9530600 10287000 5770400 10181000 0 21828000 15504000 10732000 19810000 28451 1766 25991 239207;239208;239209;239210;239211;239212;239213;239214;239215;239216;239217;239218;239219;239220;239221;239222;239223;239224;239225;239226;239227;239228 190190;190191;190192 190190 2 LENSAAPK Unmodified 828.43413 0.43413207 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By matching 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 7.3132 6.7291 2 0.0068357 5196 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 94.662 12.4 700330000 49111000 426140000 0 13973000 22994000 27960000 30082000 31434000 26067000 17405000 1633000 14784000 13949000 9088900 15708000 28452 2290 25992 239229;239230;239231;239232;239233;239234;239235;239236;239237;239238;239239;239240;239241;239242;239243 190193;190194;190195;190196;190197;190198;190199;190200;190201 190193 8 LENSIIPVHK Unmodified 1148.6554 0.65535823 5058 Q9UPT5 EXOC7 Exocyst complex component 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.08 3.42 6 19 2 2 2 2 2 2 2 2 1 2 1 2 1 2 49.123 47.796 2;3 0.00013557 66641 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 175.51 107.53 510540000 151320000 132770000 62199000 10010000 11966000 0 16630000 13677000 11061000 16174000 21788000 3867000 19625000 11893000 27566000 28453 5058 25993 239244;239245;239246;239247;239248;239249;239250;239251;239252;239253;239254;239255;239256;239257;239258;239259;239260;239261;239262;239263;239264;239265;239266;239267;239268 190202;190203;190204;190205;190206;190207;190208;190209;190210;190211;190212;190213;190214;190215 190208 12 LENSPVENVTAASTLLSQAK Unmodified 2071.0797 0.079713469 2724 Q5FWF5 ESCO1 N-acetyltransferase ESCO1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 6 2 2 2 83.84 83.987 2;3 4.1414E-09 97390 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 74.11 57.032 78543000 0 0 0 0 0 0 0 0 0 21654000 20918000 35972000 0 0 0 28454 2724 25994 239269;239270;239271;239272;239273;239274 190216;190217;190218;190219 190218 4 LENSSLQEK Unmodified 1046.5244 0.52440364 478 O75330 HMMR Hyaluronan mediated motility receptor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 14.887 14.785 2 0.0029321 14283 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 125.31 68.768 92413000 0 8728500 0 5787600 3380800 5099500 6350900 5283600 4326300 8238600 7870000 8710100 8849600 7327200 12461000 28455 478 25995 239275;239276;239277;239278;239279;239280;239281;239282;239283;239284;239285;239286;239287 190220;190221;190222;190223;190224;190225;190226;190227;190228;190229;190230;190231;190232 190221 12 LENTFCCQQK Unmodified 1326.5697 0.56965604 4630 Q9NSV4 DIAPH3 Protein diaphanous homolog 3 yes yes 0 0 0 By MS/MS 2 0 1 1 32.217 27.683 2 0.013159 36059 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.853 62.044 11884000 0 11884000 0 0 0 0 0 0 0 0 0 0 0 0 0 28456 4630 25996 239288 190233 190233 0 LENTSPMVK Oxidation (M) 1033.5114 0.51139611 488 O75376 NCOR1 Nuclear receptor corepressor 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 16.773 16.86 2 0.0079076 16253 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 61.962 14.114 17730000 0 0 0 1976200 2414600 1908900 3000900 1404800 1505200 0 0 3277700 0 2241800 0 28457 488 25997 239289;239290;239291;239292;239293;239294;239295;239296 190234;190235;190236;190237;190238 190238 633 5 LENTSPMVK Unmodified 1017.5165 0.51648149 488 O75376 NCOR1 Nuclear receptor corepressor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 26.812 26.355 2 0.0067965 26895 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.127 13.339 105860000 0 39156000 0 2957500 5436400 4839800 6258100 4060500 3467600 5854400 7749000 6767500 5885800 5506800 7924900 28458 488 25997 239297;239298;239299;239300;239301;239302;239303;239304;239305;239306;239307;239308;239309;239310 190239;190240;190241;190242;190243;190244;190245;190246;190247;190248 190243 9 LENTTPTQPLTPLHVVTQNGAEASSVK Unmodified 2831.4665 0.46650141 240 O15014 ZNF609 Zinc finger protein 609 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 74.87 74.968 3 8.5642E-26 86083 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.522 71.681 85503000 0 0 0 4235600 0 6687500 4445800 6907400 6933300 9251200 7903500 9789000 8416300 8469200 12465000 28459 240 25998 239311;239312;239313;239314;239315;239316;239317;239318;239319;239320;239321 190249;190250;190251;190252;190253;190254;190255;190256;190257;190258;190259 190252 11 LENVLNR Unmodified 856.47667 0.47666558 3909 Q96KP1 EXOC2 Exocyst complex component 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching 10 0 4 1 1 1 1 24.85 25.394 2 0.033387 26845 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 72.021 0.30592 51509000 0 0 0 0 0 0 0 0 0 0 6196500 8976600 21837000 0 14499000 28460 3909 25999 239322;239323;239324;239325 190260 190260 1 LENVSLSQQLTETQHR Unmodified 1881.9545 0.95445338 2155 Q08378 GOLGA3 Golgin subfamily A member 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 59.266 58.376 3 0.0020765 72766 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 46.892 37.486 93615000 0 14649000 10601000 0 0 7048900 7169000 0 8762200 9137400 9272600 0 11423000 0 15552000 28461 2155 26000 239326;239327;239328;239329;239330;239331;239332;239333;239334 190261;190262;190263 190263 3 LENVSQLSLDK Unmodified 1244.6612 0.66123147 3179 Q86W56 PARG Poly(ADP-ribose) glycohydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.64 2.9 1 1 9 2 1 1 1 1 1 1 1 1 1 58.978 57.638 2 1.9886E-05 73168 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 139.43 78.751 164410000 0 117800000 0 0 0 0 8673000 7285100 0 0 0 0 10395000 7301300 12948000 28462 3179 26001 239335;239336;239337;239338;239339;239340;239341;239342;239343;239344;239345 190264;190265;190266;190267;190268;190269;190270;190271;190272;190273;190274 190265 11 LENYFEELLK Unmodified 1296.6602 0.66016884 261 O15164 TRIM24 Transcription intermediary factor 1-alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 6.57 3.96 3 4 1 1 1 1 1 1 1 92.359 90.235 2 0.00072526 113129 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.38 98.812 63129000 7072500 48595000 1145000 0 0 0 0 0 0 1108500 1096400 692740 0 0 3419100 28463 261 26002 239346;239347;239348;239349;239350;239351;239352 190275;190276;190277;190278 190276 4 LENYGFDK Unmodified 984.45526 0.45526144 1738 P54277 PMS1 PMS1 protein homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 38.618 38.848 2 0.014312 42960 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 70.69 22.575 18162000 0 0 0 0 0 4184800 0 2930600 0 3853000 3770100 0 3423200 0 0 28464 1738 26003 239353;239354;239355;239356;239357 190279;190280;190281 190280 3 LENYPIPEPGPNEVLLR Unmodified 1949.0258 0.025827405 2045 Q00796 SORD Sorbitol dehydrogenase yes yes 0 0 0 By MS/MS 10 0 1 1 84.575 84.754 2 0.00037044 97823 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.486 55.569 10470000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10470000 28465 2045 26004 239358 190282 190282 1 LEPAFLSGLR Unmodified 1101.6182 0.61824444 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 81.361 81.436 2 0.018376 94236 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 48.423 25.352 84941000 0 0 0 3598700 0 0 0 13607000 7254400 15407000 15347000 12333000 7769500 9624600 0 28466 5189 26005 239359;239360;239361;239362;239363;239364;239365;239366 190283;190284;190285 190284 3 LEPAGPACPEGGR Unmodified 1309.6085 0.60848439 3928 Q96MW5 COG8 Conserved oligomeric Golgi complex subunit 8 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 38.653 38.419 2 0.027905 43124 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 35.511 17.199 5048300 0 0 0 2930500 0 2117800 0 0 0 0 0 0 0 0 0 28467 3928 26006 239367;239368 190286 190286 1 LEPASPPEDTSAEVSR Unmodified 1683.7952 0.79515877 4904 Q9UHL9 GTF2IRD1 General transcription factor II-I repeat domain-containing protein 1 yes yes 0 0 0 By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 42.035 42.403 2 0.0029244 47140 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 51.841 45.601 30589000 0 0 0 0 0 2579300 0 2111200 0 4369800 4974000 5295200 3749600 2758000 4751900 28468 4904 26007 239369;239370;239371;239372;239373;239374;239375;239376 190287;190288 190287 2 LEPASSFAVDFNEPLDFSQK Unmodified 2240.0637 0.063729054 3657 Q92766 RREB1 Ras-responsive element-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 2 1 2 91.533 90.841 2;3 7.1093E-86 111871 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 206.55 193.14 58223000 0 47323000 0 0 0 0 0 0 0 5649000 2056200 0 0 0 3194800 28469 3657 26008 239377;239378;239379;239380;239381;239382 190289;190290;190291 190290 3 LEPDILLR Unmodified 967.57023 0.57023162 2053 Q01433 AMPD2 AMP deaminase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 75.045 75.107 2 0.013906 85910 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.342 28.219 106410000 0 0 0 3561100 3845100 5563000 4825500 4006700 5860600 8619100 13739000 13849000 7258900 10680000 24601000 28470 2053 26009 239383;239384;239385;239386;239387;239388;239389;239390;239391;239392;239393;239394;239395 190292;190293;190294;190295;190296;190297;190298;190299;190300;190301;190302 190296 11 LEPDILLRAK Unmodified 1166.7023 0.70230842 2053 Q01433 AMPD2 AMP deaminase 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 2 1 1 74.801 69.741 3 0.0083783 85103 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 89.886 71.618 222630000 144020000 51639000 26972000 0 0 0 0 0 0 0 0 0 0 0 0 28471 2053 26010 239396;239397;239398;239399 190303;190304;190305 190305 2 LEPEAPALALPVTPQK Unmodified 1672.94 0.93997251 4211 Q9BWH6 RPAP1 RNA polymerase II-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 82.235 81.882 2 0.00091439 95162 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 57.175 47.17 131470000 0 86801000 0 1765100 2215000 5797600 2249800 0 1922000 5000900 4630800 3772400 2784200 5799000 8729300 28472 4211 26011 239400;239401;239402;239403;239404;239405;239406;239407;239408;239409;239410;239411 190306;190307;190308;190309 190309 4 LEPHEGLLLR Unmodified 1175.6663 0.66625727 860 P08195 SLC3A2 4F2 cell-surface antigen heavy chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 26 1 2 2 2 2 2 3 2 3 2 2 3 46.081 46.314 3 0.0034687 58740 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.893 41.59 954190000 0 0 0 34761000 51858000 68525000 66364000 69057000 53488000 60479000 79432000 148170000 82197000 95712000 144140000 28473 860 26012 239412;239413;239414;239415;239416;239417;239418;239419;239420;239421;239422;239423;239424;239425;239426;239427;239428;239429;239430;239431;239432;239433;239434;239435;239436;239437 190310;190311;190312;190313;190314;190315;190316;190317;190318;190319;190320;190321 190312 9 LEPIVNLLPDK Unmodified 1249.7282 0.72818882 3799 Q96DM3 C18orf8 Uncharacterized protein C18orf8 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 90.2 86.139 2 0.0094925 107259 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.113 31.889 40643000 0 40643000 0 0 0 0 0 0 0 0 0 0 0 0 0 28474 3799 26013 239438;239439 190322 190322 1 LEPKPQPPVAEATPR Unmodified 1628.8886 0.88860564 4898 Q9UHD8 SEPT9 Septin-9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 42.019 42.26 3 0.00011289 46917 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 70.47 49.517 253100000 0 0 0 0 18822000 19303000 22778000 19757000 16017000 26227000 33186000 33191000 20596000 16711000 26509000 28475 4898 26014 239440;239441;239442;239443;239444;239445;239446;239447;239448;239449;239450 190323;190324;190325;190326;190327;190328;190329;190330;190331;190332;190333;190334;190335;190336;190337 190325 15 LEPMIVPDLDLK Oxidation (M) 1397.7476 0.74760363 5301 Q9Y6Y8 SEC23IP SEC23-interacting protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 83.906 84.039 2 0.0041895 97312 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.436 39.152 51720000 0 0 0 0 0 10056000 0 10187000 0 0 10394000 10064000 0 11020000 0 28476 5301 26015 239451;239452;239453;239454;239455 190338;190339;190340;190341 190338 6706 4 LEPNLGEDDEDK Unmodified 1372.5994 0.59941907 3663 Q92797 SYMPK Symplekin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 37.232 36.517 2 5.4286E-06 47278 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 112.36 87.463 103600000 6069100 9715600 0 0 0 11772000 5767200 4671600 8035100 9843400 7535700 9247700 10645000 7805700 12491000 28477 3663 26016 239456;239457;239458;239459;239460;239461;239462;239463;239464;239465;239466;239467 190342;190343;190344;190345;190346;190347;190348;190349 190346 7 LEPPLWHAEFTK Unmodified 1466.7558 0.75580056 3242 Q8IWJ2 GCC2 GRIP and coiled-coil domain-containing protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 83.505 75.375 3 0.024332 98588 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.496 50.939 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28478 3242 26017 239468 190350 190350 1 LEPQELSPLSATVFPK Unmodified 1754.9455 0.94545182 2675 Q3T8J9 GON4L GON-4-like protein no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 87.88 87.404 2 0.00025105 101120 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.76 50.295 48816000 0 25251000 0 0 2220000 2722000 0 0 0 2986400 2534200 3399900 2012700 2755000 4934500 28479 2675 26018 239469;239470;239471;239472;239473;239474;239475;239476;239477 190351;190352;190353;190354;190355;190356;190357;190358;190359 190355 9 LEPQGLLYAK Unmodified 1130.6336 0.63356015 3020 Q6ZW31 SYDE1 Rho GTPase-activating protein SYDE1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 65.297 65.455 2 0.0038168 75279 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 75.109 40.301 43328000 0 0 0 4218900 0 0 4585700 0 3784400 6049900 5279500 5377900 4110200 5105300 4816100 28480 3020 26019 239478;239479;239480;239481;239482;239483;239484;239485;239486;239487 190360;190361;190362;190363;190364;190365;190366;190367;190368;190369;190370;190371 190368 12 LEPQIASASEYAHR Unmodified 1570.774 0.77396981 421 O60664 PLIN3 Perilipin-3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.89 2.72 3 1 24 1 2 1 2 2 2 2 2 2 2 2 2 2 2 2 50.627 50.237 2;3 2.1945E-16 56621 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 120.77 108.56 9580700000 345750 63686000 33229000 361950000 348900000 657190000 500330000 698900000 413860000 781550000 940030000 1169700000 1219700000 946000000 1445300000 28481 421 26020 239488;239489;239490;239491;239492;239493;239494;239495;239496;239497;239498;239499;239500;239501;239502;239503;239504;239505;239506;239507;239508;239509;239510;239511;239512;239513;239514;239515 190372;190373;190374;190375;190376;190377;190378;190379;190380;190381;190382;190383;190384;190385;190386;190387;190388;190389;190390;190391;190392;190393;190394;190395;190396;190397;190398;190399;190400;190401;190402;190403;190404;190405 190387 31 LEPQIASASEYAHRGLDK Unmodified 1984.0014 0.0014035686 421 O60664 PLIN3 Perilipin-3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 7 3 2 2 65.042 58.721 3;4 5.7395E-20 75563 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.48 97.541 2545700000 2134000000 221090000 190620000 0 0 0 0 0 0 0 0 0 0 0 0 28482 421 26021 239516;239517;239518;239519;239520;239521;239522 190406;190407;190408;190409;190410;190411;190412;190413;190414 190406 9 LEPQIAVANTYACK Unmodified 1576.7919 0.79192807 4020 Q99541 PLIN2 Perilipin-2 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 64.201 64.349 2 0.00040197 73432 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 71.555 50.778 107430000 0 0 0 6358400 0 1257000 0 6278800 7966200 12764000 11503000 25800000 11548000 9877700 14074000 28483 4020 26022 239523;239524;239525;239526;239527;239528;239529;239530;239531;239532 190415;190416;190417;190418;190419;190420 190418 6 LEPSTSTDQPVTPEPTSQATR Unmodified 2241.0761 0.076084654 2427 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 25 2 2 2 2 2 3 2 2 2 2 2 2 46.471 46.637 2;3 9.5902E-08 51547 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.911 60.104 199360000 0 0 0 10027000 10380000 14190000 12696000 9896200 21124000 19027000 19721000 21947000 20613000 15276000 24460000 28484 2427 26023 239533;239534;239535;239536;239537;239538;239539;239540;239541;239542;239543;239544;239545;239546;239547;239548;239549;239550;239551;239552;239553;239554;239555;239556;239557 190421;190422;190423;190424;190425;190426;190427;190428;190429;190430;190431;190432;190433;190434;190435;190436;190437 190425 17 LEPTQGHR Unmodified 936.47773 0.47772821 412 O60563 CCNT1 Cyclin-T1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 7 1 1 1 1 1 1 1 6.2903 6.4092 2 0.030197 4290 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 55.676 40.9 11104000 0 0 0 1304600 0 1982200 0 1962000 2266500 0 0 954930 0 1230000 1403500 28485 412 26024 239558;239559;239560;239561;239562;239563;239564 190438 190438 1 LEPVIMELER Oxidation (M) 1243.6482 0.64822394 433;2640 O60825;P16118;Q16877;Q16875 PFKFB2;PFKFB1;PFKFB4;PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase;6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 1;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase;6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 4;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase;6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching 10 0 17 2 2 2 1 1 2 1 1 1 2 1 1 73.711 73.719 2 0.0034065 84895 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 70.028 29.983 257870000 0 0 0 22956000 32469000 45749000 15669000 11589000 20667000 20029000 12077000 27730000 24842000 9932000 14163000 28486 433;2640 26025 239565;239566;239567;239568;239569;239570;239571;239572;239573;239574;239575;239576;239577;239578;239579;239580;239581 190439;190440;190441;190442;190443;190444;190445;190446;190447;190448 190440 555 8 LEPVIMELER Unmodified 1227.6533 0.65330932 433;2640 O60825;P16118;Q16877;Q16875 PFKFB2;PFKFB1;PFKFB4;PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase;6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 1;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase;6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 4;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase;6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase no no 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.57 81.632 2 0.010238 94763 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 54.982 40.206 151260000 0 0 0 6097800 13021000 15841000 11666000 16630000 7976400 14365000 10225000 11602000 8101400 11036000 24695000 28487 433;2640 26025 239582;239583;239584;239585;239586;239587;239588;239589;239590;239591;239592;239593 190449;190450;190451;190452;190453 190453 5 LEPVNAASFGK Unmodified 1131.5924 0.59242362 1142 P22670 RFX1 MHC class II regulatory factor RFX1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.12 3.26 1 1 6 2 1 1 1 1 1 1 54.961 53.33 2 0.0021805 61511 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 68.893 11.846 257400000 0 183800000 0 13506000 11871000 0 17782000 12279000 0 0 0 0 0 18155000 0 28488 1142 26026 239594;239595;239596;239597;239598;239599;239600;239601 190454;190455;190456;190457;190458;190459 190458 5 LEQAAIVK Unmodified 870.51747 0.51746776 2294 Q13451 FKBP5 Peptidyl-prolyl cis-trans isomerase FKBP5;Peptidyl-prolyl cis-trans isomerase FKBP5, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 34.776 29.28 2 0.041598 40766 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.998 11.338 793040000 30445000 762600000 0 0 0 0 0 0 0 0 0 0 0 0 0 28489 2294 26027 239602;239603 190460 190460 1 LEQANDDAR Unmodified 1030.468 0.46795139 3219 Q8IUR0 TRAPPC5 Trafficking protein particle complex subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.9068 7.0304 2 0.0030095 4945 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 126.41 109.64 64014000 0 0 0 2526400 2611700 10592000 3702400 3695900 7498400 4196100 6037200 4988500 6100500 3559000 8505800 28490 3219 26028 239604;239605;239606;239607;239608;239609;239610;239611;239612;239613;239614;239615 190461;190462;190463;190464;190465;190466;190467;190468;190469;190470;190471;190472 190461 12 LEQAQNELSAWK Unmodified 1415.7045 0.70449327 2470 Q15007 WTAP Pre-mRNA-splicing regulator WTAP yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 59.651 59.325 2 4.8599E-14 75719 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 156.48 93.934 112010000 0 47787000 0 0 3735800 5797400 3960000 5872400 3442500 6046500 7225400 8582000 5932100 6041900 7584000 28491 2470 26029 239616;239617;239618;239619;239620;239621;239622;239623;239624;239625;239626;239627 190473;190474;190475;190476;190477;190478;190479;190480;190481;190482;190483;190484;190485;190486 190477 14 LEQASGASSSQEAGSSQAAK Unmodified 1892.8712 0.87117726 4133 Q9BSV6 TSEN34 tRNA-splicing endonuclease subunit Sen34 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 2 24 1 1 2 2 2 2 2 2 2 2 2 2 2 2 13.832 13.995 2;3 4.0538E-87 13290 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 207.72 207.72 269850000 0 0 0 13733000 23787000 21795000 15279000 12162000 14422000 28953000 24161000 29509000 26960000 17883000 41208000 28492 4133 26030 239628;239629;239630;239631;239632;239633;239634;239635;239636;239637;239638;239639;239640;239641;239642;239643;239644;239645;239646;239647;239648;239649;239650;239651;239652;239653 190487;190488;190489;190490;190491;190492;190493;190494;190495;190496;190497;190498;190499;190500;190501;190502 190488 15 LEQAVEWPLK Unmodified 1211.655 0.65502388 3388 Q8NB90 SPATA5 Spermatogenesis-associated protein 5 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 76.591 75.976 2 1.021E-05 94468 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 154.56 127.03 57646000 0 33160000 0 1467100 2167700 3747900 0 0 0 4378100 0 0 2852700 2606800 7265200 28493 3388 26031 239654;239655;239656;239657;239658;239659;239660;239661;239662 190503;190504;190505;190506 190504 4 LEQAWMNEK Oxidation (M) 1163.5281 0.5281088 4118 Q9BRT9 GINS4 DNA replication complex GINS protein SLD5;DNA replication complex GINS protein SLD5, N-terminally processed yes yes 0 1 0 By MS/MS 3 0 1 1 25.724 21.588 3 0.039241 26532 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 40.002 20.24 6453400 0 6453400 0 0 0 0 0 0 0 0 0 0 0 0 0 28494 4118 26032 239663 190507 190507 1 LEQCNTELK Unmodified 1133.5387 0.53867349 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 23.35 18.849 2 0.005964 25151 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.36 50.826 60674000 4914300 55760000 0 0 0 0 0 0 0 0 0 0 0 0 0 28495 5071 26033 239664;239665 190508;190509 190508 2 LEQDFVSR Unmodified 992.49271 0.49270958 855 P07992 ERCC1 DNA excision repair protein ERCC-1 yes yes 0 0 0 By MS/MS 10 0 1 1 35.825 36.557 2 0.035464 39450 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.482 10.59 47128000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47128000 28496 855 26034 239666 190510 190510 1 LEQDMTTVDEGDEGSMPADIATLLK Unmodified 2678.2303 0.23027839 4402 Q9H4L7 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 95.591 91.553 3 1.0664E-05 113447 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.582 59.015 50458000 0 50458000 0 0 0 0 0 0 0 0 0 0 0 0 0 28497 4402 26035 239667;239668 190511 190511 1 LEQDQLWIGTK Unmodified 1329.6929 0.69286595 188 O14562 UBFD1 Ubiquitin domain-containing protein UBFD1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 69.717 68.955 2 4.489E-09 87015 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 152.54 100.68 477160000 0 365470000 7140000 3820700 3322300 8732000 5664700 4181700 3593100 9852500 11024000 14471000 5362200 7841000 26691000 28498 188 26036 239669;239670;239671;239672;239673;239674;239675;239676;239677;239678;239679;239680;239681;239682;239683 190512;190513;190514;190515;190516;190517;190518;190519;190520;190521;190522;190523 190513 12 LEQEAGAR Unmodified 872.43519 0.4351947 3581 Q8WX93 PALLD Palladin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 6.7109 6.8269 2 0.0068946 4680 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 91.906 14.158 52557000 0 0 0 0 0 19380000 18706000 0 0 0 0 0 0 0 14471000 28499 3581 26037 239684;239685;239686 190524;190525;190526 190525 3 LEQEAGARQPPPAPR Unmodified 1615.8431 0.84305243 3581 Q8WX93 PALLD Palladin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 24.833 25.031 3 2.3583E-14 26573 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 85.457 44.057 165530000 0 0 0 18267000 9404000 10782000 0 11542000 14970000 0 0 16711000 17848000 18107000 47896000 28500 3581 26038 239687;239688;239689;239690;239691;239692;239693;239694;239695 190527;190528;190529;190530;190531;190532;190533;190534;190535;190536;190537 190532 11 LEQEEYMK Oxidation (M) 1084.4747 0.47467625 4580;5006;5204 Q9NQX4;Q9ULV0;Q9Y4I1 MYO5C;MYO5B;MYO5A Unconventional myosin-Vc;Unconventional myosin-Vb;Unconventional myosin-Va no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 8 1 1 1 1 1 1 1 1 14.999 15.161 2 0.01493 14567 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 60.972 49.561 25014000 0 0 0 0 2642300 2676900 3045500 0 2819500 3179800 2682800 4199700 3767700 0 0 28501 4580;5006;5204 26039 239696;239697;239698;239699;239700;239701;239702;239703 190538;190539 190538 5983 2 LEQEEYMK Unmodified 1068.4798 0.47976163 4580;5006;5204 Q9NQX4;Q9ULV0;Q9Y4I1 MYO5C;MYO5B;MYO5A Unconventional myosin-Vc;Unconventional myosin-Vb;Unconventional myosin-Va no no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.171 28.365 2 0.03403 30983 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 53.351 42.66 61426000 0 0 0 3068200 6051900 5056500 4435200 3240400 3452900 4925700 7076200 7284900 4728200 5322800 6783500 28502 4580;5006;5204 26039 239704;239705;239706;239707;239708;239709;239710;239711;239712;239713;239714;239715 190540;190541 190541 1 LEQEIATYR Unmodified 1121.5717 0.57168818 56;70;84;73;981;76;68;97 CON__P02533;P02533;CON__Q9D312;CON__Q8N1A0;Q8N1A0;CON__P08779;P08779;CON__Q9Z2K1;CON__Q3ZAW8;CON__P13646-1;CON__P19012;P19012;P13646;CON__ENSEMBL:ENSP00000377550;CON__Q04695;Q04695;CON__Q61782;CON__P08727;P08727 KRT14;KRT222;KRT16;KRT15;KRT13;KRT17;KRT19 Keratin, type I cytoskeletal 14;Keratin-like protein KRT222;Keratin, type I cytoskeletal 16;Keratin, type I cytoskeletal 15;Keratin, type I cytoskeletal 13;Keratin, type I cytoskeletal 17;Keratin, type I cytoskeletal 19 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.731 39.91 2 0.00047511 44915 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 146.03 83.372 + 330920000 0 0 0 38663000 21258000 14554000 29842000 43840000 10408000 22526000 19260000 34638000 69669000 15245000 11016000 28503 56;70;73;76;981;84;97;68 26040 239716;239717;239718;239719;239720;239721;239722;239723;239724;239725;239726;239727 190542;190543;190544;190545;190546;190547;190548;190549;190550;190551 190550 10 LEQEIATYRR Unmodified 1277.6728 0.67279921 56;70;84;97 CON__P02533;P02533;CON__Q9D312;CON__P08779;P08779;CON__Q9Z2K1;CON__Q3ZAW8;CON__Q04695;Q04695;CON__Q61782 KRT14;KRT16;KRT17 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16;Keratin, type I cytoskeletal 17 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.224 32.415 3 4.2186E-10 35914 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 132.91 82.63 + 437010000 0 0 0 59150000 28050000 21943000 37733000 52861000 0 33123000 29245000 36490000 95191000 18503000 24715000 28504 56;70;84;97 26041 239728;239729;239730;239731;239732;239733;239734;239735;239736;239737;239738;239739 190552;190553;190554;190555;190556;190557;190558;190559;190560;190561;190562;190563 190562 10 LEQEILDFIGNNESPRK Unmodified 2001.0167 0.016719282 2482 Q15032 R3HDM1 R3H domain-containing protein 1 yes yes 0 0 1 By MS/MS 3 0 1 1 52.736 47.841 4 0.011034 59270 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 32.152 13.116 1631100 0 1631100 0 0 0 0 0 0 0 0 0 0 0 0 0 28505 2482 26042 239740 190564 190564 0 LEQELFSGGNTGINFEK Unmodified 1881.9109 0.91085723 170 O00571;O15523 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 79.313 79.439 2 1.5442E-40 91483 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 194.98 157.65 68486000 0 0 0 0 0 8778800 0 0 6656100 17370000 10960000 17262000 0 7458600 0 28506 170 26043 239741;239742;239743;239744;239745;239746;239747;239748;239749 190565;190566;190567;190568;190569;190570;190571 190568 7 LEQELTEGR Unmodified 1073.5353 0.53530267 2204 Q12899 TRIM26 Tripartite motif-containing protein 26 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 27.513 27.551 2 0.0034374 28499 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 104.2 58.069 5445200 0 0 0 2672300 0 0 0 0 0 0 0 0 0 2772900 0 28507 2204 26044 239750;239751 190572 190572 1 LEQELTEGREK Unmodified 1330.6729 0.67285879 2204 Q12899 TRIM26 Tripartite motif-containing protein 26 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.461 21.665 3 0.0058356 22585 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 51.286 35.909 212800000 0 0 0 11000000 11647000 17225000 11605000 13177000 15708000 12930000 20598000 22229000 23179000 31414000 22088000 28508 2204 26045 239752;239753;239754;239755;239756;239757;239758;239759;239760;239761;239762;239763 190573;190574;190575;190576;190577;190578;190579;190580 190578 7 LEQENDDLAHELVTSK Unmodified 1839.885 0.88503641 5171;42 Q9Y3P9;B7ZAP0 RABGAP1;RABGAP1L Rab GTPase-activating protein 1;Rab GTPase-activating protein 1-like, isoform 10 no no 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 59.008 59.564 3 0.00010151 67711 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 68.173 57.58 25763000 0 0 0 0 0 0 0 0 0 0 0 8880300 0 0 16882000 28509 5171;42 26046 239764;239765 190581;190582 190582 2 LEQENMEK Unmodified 1019.4594 0.45936054 2770 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.43 12.578 2 0.028761 10774 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.547 15.974 20016000 0 0 0 1424200 1196600 1821000 1320000 878760 1507700 1843200 1696200 2511000 1819900 1624600 2373200 28510 2770 26047 239766;239767;239768;239769;239770;239771;239772;239773;239774;239775;239776;239777 190583;190584 190584 2 LEQEQLER Unmodified 1043.5247 0.52473799 3371 Q8N8S7 ENAH Protein enabled homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 2 2 2 2 1 1 2 2 1 1 1 1 26.512 26.594 2 0.0093228 24736 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 83.265 22.303 58892000 0 0 0 5097400 5110800 7878300 12633000 2244700 2128600 7545800 2931000 3434500 5326300 4561300 0 28511 3371 26048 239778;239779;239780;239781;239782;239783;239784;239785;239786;239787;239788;239789;239790;239791;239792;239793;239794;239795 190585;190586;190587;190588;190589;190590;190591 190591 6 LEQEQLERER Unmodified 1328.6684 0.66844211 3371 Q8N8S7 ENAH Protein enabled homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 22.423 22.589 3 0.044912 22505 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 32.209 7.8656 22123000 0 0 0 0 3737100 0 0 0 3103400 0 10028000 0 0 5253700 0 28512 3371 26049 239796;239797;239798;239799 190592 190592 1 LEQFVSILMASIPLPDK Unmodified 1900.038 0.037971996 728 P00491 PNP Purine nucleoside phosphorylase yes yes 0 0 0 By MS/MS 2 0 1 1 103.89 99.158 3 0.0027234 122480 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 32.366 28.017 2995000 0 2995000 0 0 0 0 0 0 0 0 0 0 0 0 0 28513 728 26050 239800 190593 190593 1 LEQGGTADGLR Unmodified 1115.5571 0.55710075 312 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.441 22.646 2 0.001189 23652 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 74.464 18.788 56643000 0 0 0 2724000 1139200 1872400 2583600 2210800 2042900 4345300 7980500 8882300 8227800 5643500 8990300 28514 312 26051 239801;239802;239803;239804;239805;239806;239807;239808;239809;239810;239811;239812 190594;190595;190596;190597;190598;190599;190600;190601 190595 8 LEQGGTADGLRER Unmodified 1400.7008 0.70080487 312 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 20.89 20.977 3 0.0024842 21538 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 52.495 22.491 35120000 0 0 0 0 0 6197500 7603500 5784700 6723100 8811500 0 0 0 0 0 28515 312 26052 239813;239814;239815;239816;239817;239818 190602;190603;190604;190605 190604 3 LEQGQAIDDLMPAQK Oxidation (M) 1671.8138 0.81378572 967 P12277 CKB Creatine kinase B-type yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 52.248 52.684 2 2.3396E-14 58602 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 99.5 81.188 28992000 0 0 0 0 0 0 0 0 0 0 7139800 0 0 5146100 16706000 28516 967 26053 239819;239820;239821 190606;190607;190608 190606 1276 3 LEQGQAIDDLMPAQK Unmodified 1655.8189 0.8188711 967 P12277 CKB Creatine kinase B-type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 70.177 70.499 2 1.0389E-30 80301 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 178.1 141.77 84167000 0 0 0 0 0 0 0 0 0 0 13646000 9582100 0 10686000 50254000 28517 967 26053 239822;239823;239824;239825 190609;190610;190611;190612 190609 4 LEQGTSALIR Unmodified 1086.6033 0.60332266 3238 Q8IWC1 MAP7D3 MAP7 domain-containing protein 3 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 41.481 41.989 2 0.00046371 45921 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 135.79 81.242 21115000 0 0 0 0 0 0 0 0 0 0 0 0 0 8181700 12933000 28518 3238 26054 239826;239827 190613;190614 190614 2 LEQIAAEQK Unmodified 1028.5502 0.55022446 4972 Q9UKM9 RALY RNA-binding protein Raly yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.172 23.376 2 0.0070058 23853 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.573 29.456 118930000 0 0 0 6154800 5229200 6349700 5774800 4837500 2677800 9286500 8668900 17285000 18405000 13006000 21257000 28519 4972 26055 239828;239829;239830;239831;239832;239833;239834;239835;239836;239837;239838;239839 190615;190616;190617;190618;190619 190619 3 LEQIDGHIAEHNSK Unmodified 1589.7798 0.77978347 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.97 3.45 7 1 23 2 2 4 2 2 2 2 2 2 2 2 2 1 2 2 29.165 28.19 2;3;4 0.00045311 39199 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 70.889 56.202 1061300000 59172000 140890000 362680000 20503000 24072000 62266000 28021000 33939000 43158000 43443000 42550000 57053000 14562000 43591000 85431000 28520 4634 26056 239840;239841;239842;239843;239844;239845;239846;239847;239848;239849;239850;239851;239852;239853;239854;239855;239856;239857;239858;239859;239860;239861;239862;239863;239864;239865;239866;239867;239868;239869;239870 190620;190621;190622;190623;190624;190625;190626;190627;190628;190629;190630;190631;190632;190633;190634;190635;190636;190637;190638;190639;190640;190641;190642;190643;190644;190645 190640 17 LEQIQSK Unmodified 844.46543 0.46543219 2986 Q6VMQ6 ATF7IP Activating transcription factor 7-interacting protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 12.355 12.761 2 0.027176 11070 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.741 6.026 3691400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3691400 28521 2986 26057 239871 190646 190646 1 LEQISQK Unmodified 844.46543 0.46543219 3128 Q86SQ7 SDCCAG8 Serologically defined colon cancer antigen 8 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 12.512 12.795 2 0.026498 11735 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 78.616 4.9992 6655200 0 0 0 0 0 0 0 0 2588900 0 0 4066300 0 0 0 28522 3128 26058 239872;239873 190647 190647 1 LEQLAAK Unmodified 771.44905 0.44905385 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 20.297 19.508 2 0.021122 24357 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.63 38.684 198260000 5081000 128040000 0 6567700 5147700 0 9597100 6849200 5814400 9582000 0 0 0 11053000 10530000 28523 1601 26059 239874;239875;239876;239877;239878;239879;239880;239881;239882;239883 190648;190649;190650;190651;190652;190653 190650 6 LEQLDHR Unmodified 909.46683 0.46682918 3580 Q8WX92 NELFB Negative elongation factor B yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 13.065 13.239 2 0.023725 12657 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 84.244 45.025 40512000 0 0 0 2954000 3167100 0 3837400 2377700 2101500 6374800 5158900 3128400 4900800 3675100 2835900 28524 3580 26060 239884;239885;239886;239887;239888;239889;239890;239891;239892;239893;239894 190654;190655;190656;190657 190657 4 LEQLELEK Unmodified 1000.5441 0.54407645 4318 Q9H098 FAM107B Protein FAM107B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.12 3.89 3 1 4 1 2 1 1 1 1 1 50.593 48.021 2 4.7327E-08 53550 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 163.9 81.225 469300000 10245000 418880000 2839600 0 0 0 0 0 0 0 7283700 7753500 0 6606700 15694000 28525 4318 26061 239895;239896;239897;239898;239899;239900;239901;239902 190658;190659;190660;190661;190662;190663;190664;190665 190664 7 LEQLFQDEVAK Unmodified 1318.6769 0.67688153 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.143 65.231 2 0.00029757 74911 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 90.108 50.107 144080000 0 0 0 8305000 9546700 12395000 10568000 10274000 7503000 14157000 15012000 16455000 12692000 11812000 15359000 28526 2501 26062 239903;239904;239905;239906;239907;239908;239909;239910;239911;239912;239913;239914 190666;190667;190668;190669;190670;190671;190672;190673;190674;190675;190676;190677 190674 11 LEQLGIPR Unmodified 924.53927 0.53926584 2146 Q07960 ARHGAP1 Rho GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 54.656 54.791 2 0.0055122 61912 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 134.44 67.403 366020000 0 0 0 20963000 20897000 37988000 28410000 26070000 13608000 47026000 35723000 31033000 26548000 39534000 38219000 28527 2146 26063 239915;239916;239917;239918;239919;239920;239921;239922;239923;239924;239925;239926 190678;190679;190680;190681;190682;190683;190684;190685;190686;190687;190688 190683 2 LEQLGIPRQVLK Unmodified 1392.8453 0.84528426 2146 Q07960 ARHGAP1 Rho GTPase-activating protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 77.899 69.769 3 0.0020565 91723 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.744 63.113 46788000 46788000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28528 2146 26064 239927 190689 190689 1 LEQLHIMQEQQK Unmodified 1523.7766 0.77661235 2932 Q6P3W7 SCYL2 SCY1-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 48.738 48.466 3 0.00077882 53288 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.641 49.9 216420000 0 21923000 0 0 8567900 10961000 17508000 23039000 13756000 19897000 16844000 19215000 20293000 15063000 29359000 28529 2932 26065 239928;239929;239930;239931;239932;239933;239934;239935;239936;239937;239938;239939 190690;190691;190692;190693;190694;190695;190696;190697;190698;190699;190700 190694 8 LEQMMEASVR Oxidation (M) 1208.5529 0.55294335 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 31.41 31.531 2 0.0043056 34693 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 64.654 35.736 36360000 0 0 0 2356400 3668300 2852600 3430500 4558000 2205900 4724600 4670600 0 4137000 0 3755700 28530 3023 26066 239940;239941;239942;239943;239944;239945;239946;239947;239948;239949 190701;190702;190703;190704;190705;190706;190707 190701 4629;4630 7 LEQMMEASVR Unmodified 1192.558 0.55802872 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 45.345 45.71 2 0.0052474 51395 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 80.688 26.531 72627000 0 0 0 0 0 0 4446000 6589000 0 6819000 9373000 13399000 16033000 5457200 10511000 28531 3023 26066 239950;239951;239952;239953;239954;239955;239956;239957;239958 190708;190709;190710;190711;190712;190713;190714;190715;190716 190713 9 LEQMPSK Unmodified 831.41604 0.41603916 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.59 3.05 3 14 1 1 1 2 1 1 1 2 1 1 1 1 1 1 1 17.889 17.383 2 0.015833 16600 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 117.16 19.564 791150000 24075000 433240000 2044500 17034000 12313000 36346000 18942000 22122000 16305000 29948000 32452000 39581000 29751000 30329000 46670000 28532 894 26067 239959;239960;239961;239962;239963;239964;239965;239966;239967;239968;239969;239970;239971;239972;239973;239974;239975 190717;190718;190719;190720;190721;190722;190723;190724 190720 7 LEQMPSK Oxidation (M) 847.41095 0.41095378 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 9.42 1.93 1 11 1 1 1 1 1 1 1 1 1 1 1 1 6.3685 6.1829 2 0.017294 4429 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 79.116 24.591 74843000 0 3970600 0 2526800 3349500 8495700 7269400 2451900 4668400 11987000 0 7695000 8307800 8045000 6076700 28533 894 26067 239976;239977;239978;239979;239980;239981;239982;239983;239984;239985;239986;239987 190725;190726;190727;190728;190729;190730;190731;190732 190731 1150 8 LEQNQQHLQELQQEK Unmodified 1891.9388 0.93880331 1506 P46736 BRCC3 Lys-63-specific deubiquitinase BRCC36 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 33.388 33.558 3 0.012655 36813 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 21.886 4.6049 18624000 0 0 0 0 0 4469300 3118800 2914100 0 0 8121300 0 0 0 0 28534 1506 26068 239988;239989;239990;239991 190733;190734 190734 2 LEQPDLSSEMSK Oxidation (M) 1378.6286 0.62861071 3538 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 yes yes 0 1 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 35.957 36.146 2 0.0096596 40458 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 43.419 20.678 14095000 0 0 0 5880100 0 0 0 0 0 0 0 0 0 4425400 3789000 28535 3538 26069 239992;239993;239994 190735 190735 5030 1 LEQPDPGAVAAAAILR Unmodified 1590.873 0.87295558 2672 Q3LXA3 DAK Bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase (cyclizing);ATP-dependent dihydroxyacetone kinase;FAD-AMP lyase (cyclizing) yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 2 1 2 2 2 1 2 2 84.618 84.746 2;3 4.9745E-06 98198 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 100.55 75.716 103460000 0 0 0 0 0 13527000 0 0 2808900 9957300 15877000 18278000 3986200 10608000 28421000 28536 2672 26070 239995;239996;239997;239998;239999;240000;240001;240002;240003;240004;240005;240006;240007;240008 190736;190737;190738;190739;190740;190741;190742 190740 6 LEQPEEDK Unmodified 986.45566 0.45565537 1759 P55198 MLLT6 Protein AF-17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 12.109 12.206 2 0.038617 11132 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 50.966 34.812 7354500 0 0 0 0 948560 0 1287900 1150000 1199500 0 0 0 1546300 1222100 0 28537 1759 26071 240009;240010;240011;240012;240013;240014 190743;190744 190743 2 LEQQMAK Unmodified 846.42694 0.4269382 5008 Q9ULV4 CORO1C Coronin-1C yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 11.505 7.8952 2 0.036349 10834 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.614 27.104 496620000 34715000 461910000 0 0 0 0 0 0 0 0 0 0 0 0 0 28538 5008 26072 240015;240016 190745 190745 1 LEQQSVPAAVFGSLK Unmodified 1572.8512 0.8511575 4521 Q9HCS7 XAB2 Pre-mRNA-splicing factor SYF1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.819 81.881 2 3.4215E-05 94673 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 77.062 46.19 83018000 0 0 0 2503600 5024700 5935500 5836600 5747600 5052100 6838100 6316200 12031000 5534800 7500100 14698000 28539 4521 26073 240017;240018;240019;240020;240021;240022;240023;240024;240025;240026;240027;240028 190746;190747;190748;190749;190750;190751;190752;190753;190754;190755;190756 190752 11 LEQQVPVNQVFGQDEMIDVIGVTK Oxidation (M) 2701.3633 0.36328189 1402 P39023 RPL3 60S ribosomal protein L3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 87.632 87.664 3 4.9968E-07 101686 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 49.25 45.179 19003000 0 0 0 0 2410200 0 0 2159700 0 14433000 0 0 0 0 0 28540 1402 26074 240029;240030;240031 190757 190757 2189 1 LEQSEAQLGR Unmodified 1129.5728 0.57275081 3684 Q92905 COPS5 COP9 signalosome complex subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.382 24.586 2 3.4144E-32 25835 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 182.69 114.27 389980000 0 0 0 28758000 20269000 29434000 28572000 20813000 15848000 33676000 42891000 43037000 30690000 31154000 64841000 28541 3684 26075 240032;240033;240034;240035;240036;240037;240038;240039;240040;240041;240042;240043 190758;190759;190760;190761;190762;190763;190764;190765;190766;190767;190768;190769;190770 190759 11 LEQSTIVK Unmodified 916.52295 0.52294707 2080 Q02790 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.78 3.74 1 3 2 3 2 3 1 1 1 1 36.25 34.008 2 0.0031941 24497 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 119.57 22.495 7370000000 316740000 6423800000 64391000 0 0 0 0 0 52360000 0 0 0 0 130060000 382630000 28542 2080 26076 240044;240045;240046;240047;240048;240049;240050;240051;240052 190771;190772;190773;190774;190775;190776;190777;190778;190779;190780 190772 7 LEQTRLEAEFSK Unmodified 1449.7464 0.74635808 2676 Q3V6T2 CCDC88A Girdin yes yes 0 0 1 By MS/MS 2 0 1 1 54.894 50.997 3 0.023484 63924 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 44.616 21.699 6541300 0 0 6541300 0 0 0 0 0 0 0 0 0 0 0 0 28543 2676 26077 240053 190781 190781 1 LEQTSSSLAAALR Unmodified 1345.7201 0.72014333 3588 Q8WXE0 CASKIN2 Caskin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.395 60.5 2 1.6456E-08 68947 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 109.42 74.124 70853000 0 0 0 4744200 4142500 3989900 7126200 4341400 4499100 6284300 8070300 6230800 4465600 6106400 10852000 28544 3588 26078 240054;240055;240056;240057;240058;240059;240060;240061;240062;240063;240064;240065 190782;190783;190784;190785;190786;190787;190788;190789;190790;190791;190792;190793 190784 12 LEQVLSSMK Oxidation (M) 1049.5427 0.54269624 374 O43837 IDH3B Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial yes yes 0 1 0 By MS/MS 2 0 1 1 34.003 29.359 2 0.0030011 38441 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.7 55.34 24689000 0 24689000 0 0 0 0 0 0 0 0 0 0 0 0 0 28545 374 26079 240066 190794 190794 473 1 LEQVLSSMK Unmodified 1033.5478 0.54778161 374 O43837 IDH3B Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 54.252 48.447 2 0.0005659 62630 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.81 49.39 67445000 0 67445000 0 0 0 0 0 0 0 0 0 0 0 0 0 28546 374 26079 240067 190795 190795 1 LEQVRPQELSR Unmodified 1353.7365 0.7364621 2434 Q14687 GSE1 Genetic suppressor element 1 yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 35.853 36.116 3 0.0005466 39243 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 77.062 37.883 100580000 0 0 0 0 0 10574000 2248600 10167000 8511700 13549000 10027000 15082000 14603000 15818000 0 28547 2434 26080 240068;240069;240070;240071;240072;240073;240074;240075;240076 190796;190797;190798;190799;190800;190801 190801 4 LEQVSDSHFQR Unmodified 1344.6422 0.64222736 488 O75376 NCOR1 Nuclear receptor corepressor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.289 29.481 3 0.0015002 31321 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 68.069 56.536 229720000 0 0 0 11684000 12360000 13208000 15109000 23145000 11677000 23035000 18197000 21691000 25884000 18178000 35549000 28548 488 26081 240077;240078;240079;240080;240081;240082;240083;240084;240085;240086;240087;240088 190802;190803;190804;190805;190806;190807;190808;190809;190810;190811;190812;190813;190814 190812 13 LEQVSSDEGIGTLAENLLEALREHPDVNK Unmodified 3175.5997 0.59970043 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 1 By MS/MS 2 0 1 1 100.73 92.602 4 3.9264E-22 119291 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.881 67.161 10481000 10481000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28549 2775 26082 240089 190815 190815 0 LEQYTSAIEGTK Unmodified 1338.6667 0.66671078 2117 Q05682 CALD1 Caldesmon yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.549 45.789 2 1.7344E-09 50374 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 143.89 92.036 114460000 0 0 0 8029700 0 6156700 5793500 8308000 0 7092300 15739000 20209000 10975000 10141000 22020000 28550 2117 26083 240090;240091;240092;240093;240094;240095;240096;240097;240098;240099;240100;240101 190816;190817;190818;190819;190820;190821;190822;190823;190824;190825;190826 190822 11 LERALLVTASQCQQPAENK Unmodified 2155.1056 0.10555106 2055 Q01518 CAP1 Adenylyl cyclase-associated protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 58.917 52.938 3 1.0879E-40 71520 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 130.02 124.76 595470000 544810000 44289000 6369300 0 0 0 0 0 0 0 0 0 0 0 0 28551 2055 26084 240102;240103;240104 190827;190828;190829;190830;190831 190829 5 LERDLYTQQK Unmodified 1292.6725 0.67246486 3605 Q8WZA0 LZIC Protein LZIC yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 27.537 23.867 3 0.010764 30444 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 74.841 45.074 51753000 0 11636000 40117000 0 0 0 0 0 0 0 0 0 0 0 0 28552 3605 26085 240105;240106 190832;190833 190833 1 LERENAEVDGDDDAEEMEAK Oxidation (M) 2279.9336 0.9335791 804 P05198 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 26.343 26.504 3 2.622E-09 27995 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.405 70.807 43543000 0 0 0 2106400 4241300 8211600 4631600 1986800 0 0 0 12347000 0 3742300 6276100 28553 804 26086 240107;240108;240109;240110;240111;240112;240113;240114 190834;190835;190836;190837;190838 190838 965 5 LERENAEVDGDDDAEEMEAK Unmodified 2263.9387 0.93866447 804 P05198 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 37.141 37.308 3 4.4466E-09 40304 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.047 70.659 77526000 0 0 0 4916000 4380000 6388300 2348500 3037600 3101900 8454200 9081800 16279000 0 5267300 14271000 28554 804 26086 240115;240116;240117;240118;240119;240120;240121;240122;240123;240124;240125 190839;190840;190841;190842;190843;190844;190845;190846;190847;190848;190849;190850 190842 12 LEREQQQLR Unmodified 1198.6418 0.64183343 2061 Q01664 TFAP4 Transcription factor AP-4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 11.684 11.816 3 0.0077983 9908 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.124 23.197 79228000 0 0 0 4645300 6164800 0 6140000 6933700 0 10104000 0 13012000 8524600 8641200 15063000 28555 2061 26087 240126;240127;240128;240129;240130;240131;240132;240133;240134 190851;190852;190853 190851 1 LERFEIPIK Unmodified 1143.6652 0.66519463 403 O60488 ACSL4 Long-chain-fatty-acid--CoA ligase 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71.656 70.801 3 0.0040406 80886 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 75.509 46.551 649140000 95963000 22615000 0 20435000 15087000 39143000 33827000 37459000 39456000 47406000 45241000 71673000 48053000 42932000 89854000 28556 403 26088 240135;240136;240137;240138;240139;240140;240141;240142;240143;240144;240145;240146;240147;240148 190854;190855;190856;190857;190858;190859;190860;190861;190862;190863;190864;190865;190866;190867 190854 13 LERIQLPVPNAAEK Unmodified 1576.8937 0.89369102 2650 Q2KHT3 CLEC16A Protein CLEC16A yes yes 0 0 1 By MS/MS 2 0 1 1 78.987 70.857 3 0.016081 93113 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 28.11 17.322 10326000 10326000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28557 2650 26089 240149 190868 190868 1 LERLDSVPVEEQEEFK Unmodified 1945.9633 0.96328673 4260 Q9BZD4 NUF2 Kinetochore protein Nuf2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 67.25 65.938 3 0.00032084 86832 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 92.8 86.896 211570000 29975000 68804000 15389000 4290300 3104700 8060900 6734700 8866200 5506300 10566000 9647700 12864000 6022400 8552300 13186000 28558 4260 26090 240150;240151;240152;240153;240154;240155;240156;240157;240158;240159;240160;240161;240162;240163;240164;240165 190869;190870;190871;190872;190873;190874;190875;190876;190877;190878;190879;190880;190881;190882;190883;190884;190885 190876 14 LERLQSQLQENEEFQK Unmodified 2018.0069 0.006882877 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 1 By MS/MS 2 0 1 1 61.852 53.596 3 0.0045671 72457 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.188 41.025 7924400 7924400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28559 5049 26091 240166 190886 190886 1 LERPPETPTVDPTVK Unmodified 1677.8938 0.8937506 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.56 3 2 1 13 2 1 2 1 1 1 1 1 1 1 1 1 1 1 51.16 50.31 3 3.9461E-06 56800 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 82.59 70.435 1654600000 0 154930000 9538900 93533000 78237000 133450000 116400000 103930000 96037000 118210000 134320000 135690000 125140000 146470000 208770000 28560 2451 26092 240167;240168;240169;240170;240171;240172;240173;240174;240175;240176;240177;240178;240179;240180;240181;240182 190887;190888;190889;190890;190891;190892;190893;190894;190895;190896;190897;190898;190899;190900;190901;190902;190903;190904;190905;190906;190907;190908;190909;190910;190911;190912;190913;190914;190915;190916;190917 190911 29 LERTPNGPNIDK Unmodified 1352.7048 0.70482762 3633 Q92598 HSPH1 Heat shock protein 105 kDa yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 2 2 29.728 25.565 2;3 0.00012068 35603 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 108.7 74.736 219400000 11424000 21418000 186560000 0 0 0 0 0 0 0 0 0 0 0 0 28561 3633 26093 240183;240184;240185;240186;240187 190918;190919;190920;190921;190922;190923 190920 5 LERVENPLEEAVK Unmodified 1524.8148 0.814772 2895 Q6N069 NAA16 N-alpha-acetyltransferase 16, NatA auxiliary subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.6 1.74 1 19 1 2 2 2 2 2 2 2 2 2 1 63.002 62.865 2;3 7.2325E-13 71615 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 106.58 85.277 1741400000 0 0 26513000 42235000 69079000 86349000 88743000 142620000 119310000 254710000 361140000 547570000 0 0 3120600 28562 2895 26094 240188;240189;240190;240191;240192;240193;240194;240195;240196;240197;240198;240199;240200;240201;240202;240203;240204;240205;240206;240207 190924;190925;190926;190927;190928;190929;190930;190931;190932;190933;190934;190935;190936;190937;190938;190939;190940;190941;190942;190943;190944;190945;190946;190947;190948;190949;190950;190951;190952 190937 21 LERYDECLAVYR Unmodified 1585.7559 0.75587691 578 O76094 SRP72 Signal recognition particle subunit SRP72 yes yes 0 0 1 By MS/MS 10 0 1 1 57.452 57.996 3 0.023803 65773 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 44.193 32.17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28563 578 26095 240208 190953 190953 1 LESAEGVLRPGAIR Unmodified 1466.8205 0.82052608 2142 Q07864 POLE DNA polymerase epsilon catalytic subunit A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 56.125 56.172 3 0.00024822 62816 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.804 28.26 47358000 0 0 0 3883700 3373500 7013200 0 3581800 3522600 6831900 0 0 4816300 5629700 8705100 28564 2142 26096 240209;240210;240211;240212;240213;240214;240215;240216;240217 190954;190955;190956;190957;190958 190956 5 LESAEPPEK Unmodified 998.49204 0.49204087 4067 Q99856 ARID3A AT-rich interactive domain-containing protein 3A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 17.227 17.465 2 0.017618 17001 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.531 0 17473000 0 0 0 1528000 0 1431500 0 1633100 986970 1477000 1901800 4040000 0 0 4475100 28565 4067 26097 240218;240219;240220;240221;240222;240223;240224;240225 190959 190959 1 LESALTELEQLRK Unmodified 1528.8461 0.84607213 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.29 3.67 4 2 11 3 2 1 1 1 1 1 1 1 1 1 1 1 1 80.058 78.335 2;3 2.2603E-18 99484 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.65 77.079 1026000000 234620000 480270000 17292000 0 6596800 27651000 9734500 16311000 20650000 34549000 22325000 26225000 21225000 21617000 86960000 28566 965 26098 240226;240227;240228;240229;240230;240231;240232;240233;240234;240235;240236;240237;240238;240239;240240;240241;240242 190960;190961;190962;190963;190964;190965;190966;190967;190968;190969;190970;190971;190972;190973;190974 190963 10 LESCGVTSDNCRDLCGIVASK Unmodified 2340.0508 0.050814656 979 P13489 RNH1 Ribonuclease inhibitor yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 65.856 60.182 3 8.5304E-09 79759 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.783 70.121 190250000 12170000 169980000 8095800 0 0 0 0 0 0 0 0 0 0 0 0 28567 979 26099 240243;240244;240245;240246 190975;190976;190977;190978;190979 190977 5 LESDYEILER Unmodified 1265.6139 0.61394692 1441 P41252 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 63.011 63.209 2 0.0018863 72277 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 87.913 51.356 66929000 0 0 0 0 4779600 0 0 0 0 10327000 12073000 9272900 7694200 9162900 13620000 28568 1441 26100 240247;240248;240249;240250;240251;240252;240253;240254;240255;240256;240257 190980;190981;190982;190983;190984;190985;190986;190987;190988;190989;190990;190991;190992 190981 11 LESDYEILERFPGAYLK Unmodified 2042.0361 0.03605774 1441 P41252 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 2 2 2 2 93.353 88.418 3 2.0891E-54 111712 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 151.48 131.59 105790000 80687000 25102000 0 0 0 0 0 0 0 0 0 0 0 0 0 28569 1441 26101 240258;240259;240260;240261 190993;190994;190995;190996 190996 4 LESEEEGVPSTAIR Unmodified 1515.7417 0.74166663 822 P06493 CDK1 Cyclin-dependent kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.914 48.077 2 0.00011452 54264 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 106.62 78.876 134660000 0 0 0 8180500 5446500 12686000 8263100 6948500 5925800 15669000 12388000 17336000 13028000 11723000 17066000 28570 822 26102 240262;240263;240264;240265;240266;240267;240268;240269;240270;240271;240272;240273 190997;190998;190999;191000;191001;191002;191003;191004;191005;191006;191007;191008 190997 12 LESEHPDQAQAILSR Unmodified 1692.8431 0.84311201 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 47.543 46.684 3 3.6526E-28 52292 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 119.92 101.19 401910000 0 78061000 12623000 0 15099000 36554000 23415000 18008000 15732000 34389000 38236000 40485000 22200000 20464000 46644000 28571 2047 26103 240274;240275;240276;240277;240278;240279;240280;240281;240282;240283;240284;240285;240286;240287 191009;191010;191011;191012;191013;191014;191015;191016;191017;191018;191019;191020;191021;191022;191023;191024;191025;191026;191027;191028;191029;191030 191019 22 LESEHPDQAQAILSRLAEISDVWEEMK Unmodified 3123.5183 0.51827899 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS 2 0 1 1 101.33 93.203 4 1.5194E-40 119983 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 106.63 100.34 20111000 20111000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28572 2047 26104 240288 191031 191031 1 LESELANFGPR Unmodified 1231.6197 0.619701 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 67.376 65.279 2 1.1772E-05 75048 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 122.13 80.026 16239000 0 0 6486600 0 9752400 0 0 0 0 0 0 0 0 0 0 28573 2431 26105 240289;240290;240291;240292;240293;240294 191032;191033;191034;191035;191036;191037 191034 6 LESELANFGPRINDIK Unmodified 1814.9527 0.95266246 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 82.08 76.959 3 0.00029422 98190 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.85 58.486 102560000 21910000 63770000 16880000 0 0 0 0 0 0 0 0 0 0 0 0 28574 2431 26106 240295;240296;240297 191038;191039;191040 191039 3 LESELIK Unmodified 830.47493 0.47493425 3229 Q8IVL5 LEPREL1 Prolyl 3-hydroxylase 2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 55.342 49.995 2 0.016687 64669 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.7 23.437 22125000 0 22125000 0 0 0 0 0 0 0 0 0 0 0 0 0 28575 3229 26107 240298;240299 191041 191041 1 LESEMEDAYHEHQANLLR Unmodified 2183.9906 0.99058089 1151 P23246 SFPQ Splicing factor, proline- and glutamine-rich yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 58.446 58.716 4 0.00022534 66061 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.589 51.483 19869000 0 0 0 0 0 4507700 0 0 4125700 0 0 0 0 0 11236000 28576 1151 26108 240300;240301;240302 191042 191042 1 LESENDEYER Unmodified 1282.5313 0.53133951 601 O94906 PRPF6 Pre-mRNA-processing factor 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.108 18.296 2 0.0013675 18708 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 107.15 98.291 122520000 0 0 0 6992400 8097100 7984200 9476100 8805000 7359200 14490000 9580700 10620000 11195000 14057000 13867000 28577 601 26109 240303;240304;240305;240306;240307;240308;240309;240310;240311;240312;240313;240314 191043;191044;191045;191046;191047;191048;191049;191050;191051;191052;191053;191054;191055 191055 13 LESENDEYERAR Unmodified 1509.6696 0.66956432 601 O94906 PRPF6 Pre-mRNA-processing factor 6 yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 18.847 19.073 3 0.0077236 19015 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 45.257 24.006 56886000 0 0 0 0 1902400 5296600 5291100 5116900 3371200 6472100 5372000 7486100 6111300 4126700 6340200 28578 601 26110 240315;240316;240317;240318;240319;240320;240321;240322;240323;240324;240325 191056;191057;191058;191059;191060;191061 191058 3 LESESTSPSLEMK Unmodified 1436.6705 0.67047553 2810 Q5VT52 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 44.799 44.971 2 3.2971E-106 50384 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 205.13 176.92 402990000 0 0 0 16183000 21672000 21195000 27443000 36161000 27571000 34876000 51994000 37968000 38563000 33289000 56079000 28579 2810 26111 240326;240327;240328;240329;240330;240331;240332;240333;240334;240335;240336;240337;240338 191062;191063;191064;191065;191066;191067;191068;191069;191070;191071;191072;191073;191074;191075;191076 191071 15 LESESTSPSLEMK Oxidation (M) 1452.6654 0.66539015 2810 Q5VT52 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 1 2 2 2 2 2 2 2 2 2 2 31.005 31.22 2 1.7268E-13 34181 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 138.76 120.9 328810000 0 0 0 20228000 10493000 22266000 33247000 28989000 26726000 34302000 24254000 41212000 36844000 26060000 24189000 28580 2810 26111 240339;240340;240341;240342;240343;240344;240345;240346;240347;240348;240349;240350;240351;240352;240353;240354;240355;240356;240357;240358;240359;240360;240361 191077;191078;191079;191080;191081;191082;191083;191084;191085;191086;191087;191088;191089;191090 191080 4443 11 LESEVSRYK Unmodified 1109.5717 0.57168818 2676 Q3V6T2 CCDC88A Girdin yes yes 0 0 1 By MS/MS 2 0 1 1 22.814 19.947 2 0.034043 25522 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 108.46 57.495 3548800 0 0 3548800 0 0 0 0 0 0 0 0 0 0 0 0 28581 2676 26112 240362 191091 191091 1 LESGMQNMSIHTK 2 Oxidation (M) 1506.6807 0.68066306 67 CON__P05787;P05787;CON__REFSEQ:XP_092267 KRT8 Keratin, type II cytoskeletal 8 yes no 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 18 2 2 2 1 2 2 2 1 2 1 1 12.558 12.677 2;3 0.00062643 11866 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 72.496 64.086 + 410530000 0 0 0 37691000 47933000 48823000 45687000 28175000 26426000 53270000 3499300 80049000 7420900 0 31553000 28582 67 26113 240363;240364;240365;240366;240367;240368;240369;240370;240371;240372;240373;240374;240375;240376;240377;240378;240379;240380 191092;191093;191094;191095;191096;191097;191098;191099;191100;191101 191095 77;78 4 LESGMQNMSIHTK Unmodified 1474.6908 0.69083381 67 CON__P05787;P05787;CON__REFSEQ:XP_092267 KRT8 Keratin, type II cytoskeletal 8 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 2 2 1 2 2 1 2 39.146 39.308 2;3 4.1282E-32 42996 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 149 120.27 + 1582900000 0 0 0 102110000 89045000 114900000 115160000 113000000 59213000 123090000 156090000 191430000 162250000 125250000 231390000 28583 67 26113 240381;240382;240383;240384;240385;240386;240387;240388;240389;240390;240391;240392;240393;240394;240395;240396;240397;240398;240399;240400;240401;240402 191102;191103;191104;191105;191106;191107;191108;191109;191110;191111;191112;191113;191114;191115;191116;191117;191118;191119;191120;191121;191122 191118 20 LESGMQNMSIHTK Oxidation (M) 1490.6857 0.68574843 67 CON__P05787;P05787;CON__REFSEQ:XP_092267 KRT8 Keratin, type II cytoskeletal 8 yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 30 3 3 3 2 3 3 2 3 2 2 2 2 23.588 23.762 2;3 3.3264E-12 27107 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 123.64 111.28 + 624850000 0 0 0 84928000 66900000 106350000 56596000 39866000 43853000 36898000 64917000 6982800 47611000 32188000 37758000 28584 67 26113 240403;240404;240405;240406;240407;240408;240409;240410;240411;240412;240413;240414;240415;240416;240417;240418;240419;240420;240421;240422;240423;240424;240425;240426;240427;240428;240429;240430;240431;240432 191123;191124;191125;191126;191127;191128;191129;191130;191131;191132;191133;191134;191135;191136;191137;191138;191139;191140;191141;191142;191143 191124 77;78 15 LESGSICK Unmodified 892.43242 0.43241751 1014 P15170 GSPT1 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.18 3.74 3 1 7 1 2 1 1 1 1 1 1 1 1 15.784 14.686 2 0.01026 14332 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 80.229 34.213 1528000000 45163000 1227600000 10250000 0 0 0 15704000 8542600 0 23442000 54251000 0 42917000 47738000 52410000 28585 1014 26114 240433;240434;240435;240436;240437;240438;240439;240440;240441;240442;240443 191144;191145;191146;191147;191148;191149;191150;191151;191152;191153;191154 191153 11 LESIADMK Unmodified 905.45282 0.4528186 4612 Q9NRW7 VPS45 Vacuolar protein sorting-associated protein 45 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 42.394 42.666 2 0.025333 47697 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 58.782 10.866 35520000 0 0 0 0 0 6594100 6218200 0 0 7258200 0 0 6267200 0 9182700 28586 4612 26115 240444;240445;240446;240447;240448 191155 191155 1 LESIASVFK Unmodified 992.55425 0.5542472 4968 Q9UKJ3 GPATCH8 G patch domain-containing protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 76.239 75.397 2 0.00355 86660 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 89.698 52.677 113970000 0 27317000 6003200 7810600 9828000 8606500 0 11948000 0 15813000 14002000 0 0 12638000 0 28587 4968 26116 240449;240450;240451;240452;240453;240454;240455;240456;240457;240458 191156;191157;191158;191159;191160;191161;191162;191163;191164;191165;191166 191157 10 LESIDGNEEESMK Oxidation (M) 1495.6348 0.6348183 3518 Q8TEQ6 GEMIN5 Gem-associated protein 5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 26.75 26.947 2 0.00044003 27791 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.781 67.34 58785000 0 0 0 0 3734200 7445800 4005600 0 4392900 7063400 9263700 0 8800100 6061700 8017200 28588 3518 26117 240459;240460;240461;240462;240463;240464;240465;240466;240467;240468 191167;191168;191169;191170;191171;191172;191173;191174;191175;191176 191170 5020 10 LESIDGNEEESMK Unmodified 1479.6399 0.63990368 3518 Q8TEQ6 GEMIN5 Gem-associated protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 38.891 38.877 2 6.9861E-16 43008 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 164.64 145.4 44565000 0 0 0 4064600 3651600 9074000 5141000 4383300 0 7919900 10331000 0 0 0 0 28589 3518 26117 240469;240470;240471;240472;240473;240474;240475 191177;191178;191179;191180;191181;191182;191183 191180 6 LESIISGAALMADSSCTR Oxidation (M) 1896.8921 0.89211239 1340;1200 P35221;P26232 CTNNA1;CTNNA2 Catenin alpha-1;Catenin alpha-2 no no 0 1 0 By MS/MS 10 0 1 1 75.158 74.637 2 3.1675E-05 86587 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 59.57 43.037 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28590 1340;1200 26118 240476 191184 191184 1749 1 LESLDGEELMK Oxidation (M) 1278.6013 0.60133333 2771 Q5T2E6 C10orf76 UPF0668 protein C10orf76 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 48.366 48.532 2 0.0035526 53806 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 59.153 31.329 29803000 0 0 0 0 3831400 0 4292500 5741600 3028800 0 0 3145500 5056600 4707200 0 28591 2771 26119 240477;240478;240479;240480;240481;240482;240483 191185;191186;191187;191188 191187 4403 4 LESLDGEELMK Unmodified 1262.6064 0.60641871 2771 Q5T2E6 C10orf76 UPF0668 protein C10orf76 yes yes 0 0 0 By MS/MS 10 0 1 1 63.707 64.271 2 0.0055913 72831 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.377 45.31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28592 2771 26119 240484 191189 191189 1 LESLEAK Unmodified 788.42798 0.42798405 214 O14777 NDC80 Kinetochore protein NDC80 homolog yes yes 0 0 0 By matching By MS/MS By matching 10 0 3 1 1 1 21.142 21.255 2 0.026498 22315 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 78.616 15.901 35114000 0 0 0 27834000 0 6380300 0 0 0 0 899970 0 0 0 0 28593 214 26120 240485;240486;240487 191190 191190 1 LESLEETNPEYAK Unmodified 1521.7199 0.71986856 2818 Q5VUA4 ZNF318 Zinc finger protein 318 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 47.863 47.569 2 1.8098E-11 52625 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 120.09 102.65 98600000 0 27473000 0 3775300 4866900 6347800 5790300 5994400 4370600 6514000 7159200 6242000 5095600 4881000 10090000 28594 2818 26121 240488;240489;240490;240491;240492;240493;240494;240495;240496;240497;240498;240499;240500 191191;191192;191193;191194;191195;191196;191197;191198;191199;191200;191201;191202;191203 191195 13 LESLSAATTFEPLEPVK Unmodified 1830.9615 0.96149581 3311 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 84.424 84.49 2 5.7546E-96 97644 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 189.33 171.52 207120000 0 0 0 6585900 11742000 14165000 11987000 22382000 14251000 26306000 21021000 20681000 10539000 13732000 33727000 28595 3311 26122 240501;240502;240503;240504;240505;240506;240507;240508;240509;240510;240511;240512 191204;191205;191206;191207;191208;191209;191210;191211;191212;191213;191214;191215;191216;191217;191218 191208 15 LESLSQVGPVNENVMEEDLK Unmodified 2229.0835 0.083478218 2456 Q14966 ZNF638 Zinc finger protein 638 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 84.688 80.676 3 0.036982 100254 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 21.701 16.491 80676000 0 80676000 0 0 0 0 0 0 0 0 0 0 0 0 0 28596 2456 26123 240513;240514 191219 191219 1 LESMETYLK Unmodified 1112.5424 0.54236189 1535 P48200 IREB2 Iron-responsive element-binding protein 2 yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 68.124 61.022 2 0.024029 77545 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.692 51.989 56203000 4506000 51697000 0 0 0 0 0 0 0 0 0 0 0 0 0 28597 1535 26124 240515;240516 191220 191220 1 LESPSFTGTGDTEIAHATEDLENNGSK Unmodified 2819.2733 0.27334049 2168 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 77.666 76.536 3 0 94403 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 219.38 209.93 1505000000 49320000 1041700000 27116000 4562000 15608000 29524000 7845400 20795000 18857000 50677000 34256000 45779000 13211000 38442000 107320000 28598 2168 26125 240517;240518;240519;240520;240521;240522;240523;240524;240525;240526;240527;240528;240529;240530;240531;240532 191221;191222;191223;191224;191225;191226;191227;191228;191229;191230;191231;191232;191233;191234;191235 191225 15 LESPTVSTLTPSSPGK Unmodified 1599.8356 0.83556702 3772 Q96C36 PYCR2 Pyrroline-5-carboxylate reductase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 2 1 1 1 1 1 1 1 1 1 1 59.849 59.476 2 5.9471E-15 67882 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 101.6 41.161 129140000 0 86209000 0 0 1663300 3631900 3891900 3249500 2429000 4412000 5994900 7884800 0 3618900 6154000 28599 3772 26126 240533;240534;240535;240536;240537;240538;240539;240540;240541;240542;240543;240544;240545 191236;191237;191238;191239;191240;191241;191242;191243;191244;191245;191246;191247 191246 12 LESQAGQQVSR Unmodified 1201.6051 0.60511357 1602 P49815 TSC2 Tuberin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.601 13.763 2 2.0862E-05 13269 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 123.75 61.202 98919000 0 0 0 5907600 5208100 4865500 5768500 7104200 5849100 9169700 8854700 13091000 10723000 8614800 13763000 28600 1602 26127 240546;240547;240548;240549;240550;240551;240552;240553;240554;240555;240556;240557 191248;191249;191250;191251;191252;191253;191254;191255;191256;191257 191254 10 LESRALAEIAK Unmodified 1199.6874 0.68738664 1151 P23246 SFPQ Splicing factor, proline- and glutamine-rich yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 54.696 49.056 2;3 0.005439 64577 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106 47.087 1620600000 1436100000 106540000 77966000 0 0 0 0 0 0 0 0 0 0 0 0 28601 1151 26128 240558;240559;240560;240561;240562 191258;191259;191260;191261;191262 191258 4 LESSEGEIIQTVDR Unmodified 1574.7788 0.77878042 4030 Q99590 SCAF11 Protein SCAF11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 63.946 63.92 2 1.7113E-18 72121 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 119.45 67.377 37387000 0 0 0 6803300 0 0 0 0 0 0 0 16518000 14066000 0 0 28602 4030 26129 240563;240564;240565;240566;240567;240568;240569;240570;240571 191263;191264;191265;191266;191267;191268;191269;191270;191271;191272 191267 10 LESSQLQIAGLEHLR Unmodified 1692.9159 0.91588303 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 76.556 76.728 3 0.022402 88158 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 24.538 17.336 27806000 0 0 0 0 0 0 0 1775800 4022600 0 0 0 3390400 5929200 12688000 28603 2446 26130 240572;240573;240574;240575;240576 191273 191273 1 LESTESR Unmodified 820.39266 0.39266118 757 P02545 LMNA Prelamin-A/C;Lamin-A/C yes yes 0 0 0 By MS/MS 2 0 1 1 5.4579 2.2175 2 0.02978 4135 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.262 33.968 75076000 0 75076000 0 0 0 0 0 0 0 0 0 0 0 0 0 28604 757 26131 240577 191274 191274 1 LESTESRSSFSQHAR Unmodified 1720.8129 0.81287452 757 P02545 LMNA Prelamin-A/C;Lamin-A/C yes yes 0 0 1 By MS/MS By MS/MS 2.25 0.433 3 1 3 1 21.812 17.562 3;4 0.0063054 25152 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 36.029 36.029 304510000 301270000 0 3239600 0 0 0 0 0 0 0 0 0 0 0 0 28605 757 26132 240578;240579;240580;240581 191275;191276;191277 191277 3 LESTLDGLER Unmodified 1131.5772 0.57716749 3441 Q8NF91 SYNE1 Nesprin-1 yes yes 0 0 0 By MS/MS 10 0 1 1 36.487 37.231 2 0.02315 40652 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 45.68 3.804 13183000 0 0 0 0 0 0 0 0 0 0 0 13183000 0 0 0 28606 3441 26133 240582 191278 191278 1 LESTLNYGMER Unmodified 1311.6129 0.61290107 1358 P35606 COPB2 Coatomer subunit beta' yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 50.788 51.22 2 0.012555 56836 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.064 40.749 23517000 0 0 0 0 0 0 0 4792500 0 0 0 0 0 0 18724000 28607 1358 26134 240583;240584 191279 191279 1 LESTVGSPEK Unmodified 1045.5292 0.52915466 4440 Q9H7Z6 KAT8 Histone acetyltransferase KAT8 yes yes 0 0 0 By MS/MS 2 0 1 1 21.299 17.586 2 0.0032899 23109 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.331 40.32 29078000 0 29078000 0 0 0 0 0 0 0 0 0 0 0 0 0 28608 4440 26135 240585 191280 191280 1 LESVAEEHEILTK Unmodified 1496.7722 0.77223848 3489 Q8TCG1 KIAA1524 Protein CIP2A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 49.935 48.631 3 7.4289E-07 61283 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 83.499 69.146 505110000 22970000 247730000 59318000 8189800 7817600 14906000 11355000 10005000 9547900 18531000 18187000 21594000 16453000 13476000 25028000 28609 3489 26136 240586;240587;240588;240589;240590;240591;240592;240593;240594;240595;240596;240597;240598;240599;240600;240601 191281;191282;191283;191284;191285;191286;191287;191288;191289;191290;191291;191292;191293 191290 13 LESVSEDPTQLEEVEK Unmodified 1830.8735 0.87346867 3907 Q96KG9 SCYL1 N-terminal kinase-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 65.245 64.058 2 8.5349E-42 73833 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 159.77 124.1 417890000 9763000 29794000 0 23987000 21953000 35234000 27205000 30332000 20064000 36421000 39460000 43539000 26372000 32193000 41574000 28610 3907 26137 240602;240603;240604;240605;240606;240607;240608;240609;240610;240611;240612;240613;240614;240615;240616 191294;191295;191296;191297;191298;191299;191300;191301;191302;191303;191304;191305;191306;191307;191308;191309 191295 16 LETADETSHLQPLNK Unmodified 1694.8475 0.84752869 297 O43149 ZZEF1 Zinc finger ZZ-type and EF-hand domain-containing protein 1 yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 50.571 45.108 2;3 0.020558 58697 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 59.198 38.199 96711000 0 96711000 0 0 0 0 0 0 0 0 0 0 0 0 0 28611 297 26138 240617;240618;240619 191310;191311 191310 1 LETAIASHQQAMEELK Unmodified 1797.8931 0.89309867 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.09 3.85 4 7 1 1 2 1 1 1 1 1 1 1 57.225 55.406 3 2.379E-42 72583 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 149.3 119.16 257960000 8131100 130530000 55045000 0 5976800 0 0 0 0 7304800 8235400 10113000 6198000 7032100 19398000 28612 1286 26139 240620;240621;240622;240623;240624;240625;240626;240627;240628;240629;240630 191312;191313;191314;191315;191316;191317;191318;191319;191320;191321 191314 10 LETAIASHQQAMEELK Oxidation (M) 1813.888 0.88801329 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 5.4 3.77 2 1 2 1 2 1 1 44.435 41.346 2;3 0.00052259 52008 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 84.658 60.315 50945000 0 4380300 42179000 0 0 0 0 0 4385500 0 0 0 0 0 0 28613 1286 26139 240631;240632;240633;240634;240635 191322;191323;191324;191325;191326 191325 1894 3 LETDSRPVSR Unmodified 1158.5993 0.59929991 3194 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 13.1 13.234 3 0.0038185 12384 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 58.37 21.026 123900000 0 0 0 7545300 9213700 15432000 0 7708200 0 20071000 0 16979000 15455000 12116000 19375000 28614 3194 26140 240636;240637;240638;240639;240640;240641;240642;240643;240644 191327;191328;191329;191330;191331;191332;191333;191334 191333 3 LETEASNMK Unmodified 1021.475 0.4750106 1181 P25054 APC Adenomatous polyposis coli protein yes yes 0 0 0 By MS/MS 2 0 1 1 18.796 15.313 2 0.035569 20114 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 63.419 35.201 3308700 0 3308700 0 0 0 0 0 0 0 0 0 0 0 0 0 28615 1181 26141 240645 191335 191335 1 LETELQEATK Unmodified 1160.5925 0.5924832 2264 Q13287 NMI N-myc-interactor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.17 3.85 2 1 3 1 2 1 1 1 38.629 36.023 2 0.0045335 45978 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.2 55.639 310550000 6406800 290630000 0 0 0 5392400 2264200 0 0 0 0 5848700 0 0 0 28616 2264 26142 240646;240647;240648;240649;240650;240651 191336;191337;191338;191339;191340;191341 191339 6 LETGAPRPPATVTNAVSWR Unmodified 2022.0647 0.064672527 4232 Q9BXS5 AP1M1 AP-1 complex subunit mu-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 70.965 71.168 3 5.3408E-06 81875 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 69.737 35.239 40836000 0 0 0 0 0 9429700 0 2855000 2049400 6808100 0 5289900 0 0 14404000 28617 4232 26143 240652;240653;240654;240655;240656;240657;240658;240659;240660 191342;191343;191344;191345;191346;191347;191348;191349 191342 8 LETGQATDCVRSVCR Unmodified 1750.8091 0.80905147 2121 Q05BV3 EML5 Echinoderm microtubule-associated protein-like 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 9 2.65 1 7 1 1 1 1 1 1 1 1 66.502 65.912 2 0.0037881 83004 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.974 47.027 138470000 0 26671000 0 0 0 16674000 0 10487000 8909600 13965000 18661000 0 17714000 25386000 0 28618 2121 26144 240661;240662;240663;240664;240665;240666;240667;240668 191350;191351 191351 2 LETGQFLTFR Unmodified 1210.6346 0.63462279 3 A0AVT1 UBA6 Ubiquitin-like modifier-activating enzyme 6 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 79.182 79.316 2 0.0019344 91604 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 102.62 55.627 55626000 0 0 0 0 0 8198100 2772300 0 0 4662100 6252700 7158000 5766200 6274300 14542000 28619 3 26145 240669;240670;240671;240672;240673;240674;240675;240676 191352;191353;191354;191355;191356;191357;191358 191352 7 LETHMTPEMFR Unmodified 1390.6373 0.63734168 2152 Q08211 DHX9 ATP-dependent RNA helicase A yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 60.258 60.415 3 0.0042585 68082 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.442 39.487 53942000 0 0 0 0 2436100 5707100 2866500 5534900 0 5676800 0 5444500 6263500 5167200 14845000 28620 2152 26146 240677;240678;240679;240680;240681;240682;240683;240684;240685 191359;191360;191361;191362;191363;191364 191361 6 LETIQAQLDSLT Unmodified 1330.698 0.6980109 5281 Q9Y6G5 COMMD10 COMM domain-containing protein 10 yes yes 0 0 0 By MS/MS By MS/MS 2 0.816 1 1 1 1 2 87.524 83.495 2 2.8954E-05 103406 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.4 85.067 60983000 0 60983000 0 0 0 0 0 0 0 0 0 0 0 0 0 28621 5281 26147 240686;240687;240688 191365;191366;191367 191365 3 LETKVETQTEELKQNESR Unmodified 2161.0863 0.08625541 2891 Q6KC79 NIPBL Nipped-B-like protein yes yes 0 0 2 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 101.37 97.227 3 0.027012 120404 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 32.688 3.0525 17393000 3581300 13812000 0 0 0 0 0 0 0 0 0 0 0 0 0 28622 2891 26148 240689;240690 191368 191368 1 LETLGIGQR Unmodified 985.55564 0.55564418 4772 Q9NZL9 MAT2B Methionine adenosyltransferase 2 subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.883 48.929 2 0.0038397 54085 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 112.17 39.132 97174000 0 0 0 8982500 6183500 11392000 9687900 5816700 6737400 9818600 0 22099000 0 16456000 0 28623 4772 26149 240691;240692;240693;240694;240695;240696;240697;240698;240699;240700;240701;240702 191369;191370;191371;191372;191373;191374;191375;191376;191377;191378;191379;191380;191381 191376 13 LETLLRPQLK Unmodified 1209.7445 0.74450759 246 O15056 SYNJ2 Synaptojanin-2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 59.01 59.195 3 0.0023177 66396 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.465 44.457 50151000 0 0 0 0 2029900 4171700 5014000 3847300 3733100 4894500 7008500 4274700 3385500 4752700 7038700 28624 246 26150 240703;240704;240705;240706;240707;240708;240709;240710;240711;240712;240713 191382;191383;191384;191385;191386;191387;191388 191385 7 LETLTNQFSDSK Unmodified 1381.6725 0.67252444 3217 Q8IUD2 ERC1 ELKS/Rab6-interacting/CAST family member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 2 1 6 1 2 1 1 1 1 1 1 54.932 52.449 2 8.9412E-07 67250 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.78 112.96 307410000 0 282960000 0 0 0 0 6624400 0 0 0 0 0 0 0 17833000 28625 3217 26151 240714;240715;240716;240717;240718;240719;240720;240721;240722 191389;191390;191391;191392;191393;191394;191395;191396;191397 191391 9 LETNENSHQK Unmodified 1198.5578 0.55782903 1026 P15822 HIVEP1 Zinc finger protein 40 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.31 2.4 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 58.825 59.352 3 0.011537 62213 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 38.567 21.094 728310000 84329000 0 0 41740000 58715000 52511000 47309000 48381000 43965000 51233000 70658000 57164000 43410000 57043000 71848000 28626 1026 26152 240723;240724;240725;240726;240727;240728;240729;240730;240731;240732;240733;240734;240735 191398;191399 191398 2 LETNPDIKPSNVEPMEK Oxidation (M) 1955.951 0.95100748 4195 Q9BVP2 GNL3 Guanine nucleotide-binding protein-like 3 yes yes 0 1 1 By MS/MS 3 0 1 1 49.621 44.725 3 0.0057919 55523 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 42.647 32.725 4184100 0 4184100 0 0 0 0 0 0 0 0 0 0 0 0 0 28627 4195 26153 240736 191400 191400 5673 1 LETPAQFR Unmodified 960.50288 0.50288033 3668 Q92830 KAT2A Histone acetyltransferase KAT2A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.616 45.785 2 0.0068357 51365 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 94.662 49.689 77181000 0 0 0 4232700 5417900 8084000 3672500 4715400 4370100 10851000 9126300 10661000 4789300 5930000 5330300 28628 3668 26154 240737;240738;240739;240740;240741;240742;240743;240744;240745;240746;240747;240748 191401;191402;191403;191404;191405;191406;191407;191408;191409;191410;191411;191412;191413 191402 13 LETPPSK Unmodified 770.41742 0.41741937 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 13.488 13.675 2 0.0245 12636 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 82.671 28.146 171970000 0 0 0 11656000 0 12041000 13987000 16053000 14528000 19398000 18427000 21900000 0 23291000 20694000 28629 1364 26155 240749;240750;240751;240752;240753;240754;240755;240756;240757;240758 191414;191415;191416;191417;191418;191419;191420 191418 7 LETQPQEEYEIINVEVK Unmodified 2060.0314 0.031366293 2685 Q4J6C6 PREPL Prolyl endopeptidase-like yes yes 0 0 0 By MS/MS By MS/MS 2.4 0.49 3 2 1 4 83.582 78.759 2;3 8.4169E-09 99776 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.53 88.901 90443000 5859700 84584000 0 0 0 0 0 0 0 0 0 0 0 0 0 28630 2685 26156 240759;240760;240761;240762;240763 191421;191422;191423 191423 3 LETTHGQTGDTTR Unmodified 1415.6641 0.66408501 95 CON__Q5D862;Q5D862 FLG2 Filaggrin-2 yes no 0 0 0 By MS/MS 10 0 1 1 7.3055 7.1779 3 0.00037077 5293 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 77.078 47.779 + 7302400 0 0 0 7302400 0 0 0 0 0 0 0 0 0 0 0 28631 95 26157 240764 191424 191424 1 LETTQLLAK Unmodified 1015.5914 0.59136099 4603 Q9NRG7 SDR39U1 Epimerase family protein SDR39U1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 51.85 51.616 2 0.015842 58896 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 57.047 11.966 11567000 0 0 0 0 5552400 0 6014200 0 0 0 0 0 0 0 0 28632 4603 26158 240765;240766 191425 191425 1 LETVDPTYIFHPR Unmodified 1586.8093 0.80929269 623 O95155 UBE4B Ubiquitin conjugation factor E4 B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 79.651 79.767 3 0.0023388 92184 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 52.576 45.374 32374000 0 0 0 0 0 8904200 6716200 0 4365500 0 0 0 0 12388000 0 28633 623 26159 240767;240768;240769;240770 191426;191427;191428 191426 3 LETVVCTGSVPVDK Unmodified 1502.765 0.76504461 3525 Q8TF40 FNIP1 Folliculin-interacting protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 63.224 57.331 2 0.0015084 73554 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.403 53.444 10470000 0 10470000 0 0 0 0 0 0 0 0 0 0 0 0 0 28634 3525 26160 240771 191429 191429 1 LETYENAR Unmodified 994.47197 0.47197413 601 O94906 PRPF6 Pre-mRNA-processing factor 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 19.784 19.922 2 0.010495 19144 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 79.469 47.355 37548000 0 0 0 0 4899700 4256100 6517900 4887200 3050900 0 0 9064500 0 4871700 0 28635 601 26161 240772;240773;240774;240775;240776;240777;240778 191430;191431;191432;191433;191434 191433 5 LETYENARK Unmodified 1122.5669 0.56693715 601 O94906 PRPF6 Pre-mRNA-processing factor 6 yes yes 0 0 1 By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.011 13.167 2 0.029921 11890 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 89.355 64.579 38139000 0 0 0 1581200 1430500 1840200 2487400 2736400 1988600 3509600 3228800 5471500 4982000 3887200 4995300 28636 601 26162 240779;240780;240781;240782;240783;240784;240785;240786;240787;240788;240789;240790 191435;191436 191435 1 LEVAPISDIIAIK Unmodified 1380.8228 0.82281749 988 P13804 ETFA Electron transfer flavoprotein subunit alpha, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.8 3.12 3 1 1 1 2 1 1 94.672 90.963 2 0.0040683 109408 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 84.17 73.418 305820000 9404800 288100000 3552600 0 0 0 0 0 0 0 0 0 0 0 4759400 28637 988 26163 240791;240792;240793;240794;240795 191437;191438;191439;191440;191441 191439 5 LEVCREFQR Unmodified 1235.6081 0.60809046 2832;4646 Q5VZF2;Q9NUK0 MBNL2;MBNL3 Muscleblind-like protein 2;Muscleblind-like protein 3 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 39.72 39.98 3 0.021441 44505 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 39.848 11.122 58610000 0 0 0 4243300 0 0 6995300 5320600 5150100 6467900 4642800 4220900 4963500 6297400 10309000 28638 2832;4646 26164 240796;240797;240798;240799;240800;240801;240802;240803;240804;240805 191442;191443 191442 2 LEVDIPLVK Unmodified 1024.6168 0.61684746 1974 P78344 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.39 3.7 5 1 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 83.118 82.127 2 0.0037643 95424 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 96.253 59.858 1343100000 8439600 156680000 3644500 22994000 53950000 86953000 48722000 86100000 63531000 115660000 101810000 118640000 69791000 187190000 218990000 28639 1974 26165 240806;240807;240808;240809;240810;240811;240812;240813;240814;240815;240816;240817;240818;240819;240820;240821;240822;240823 191444;191445;191446;191447;191448;191449;191450;191451;191452;191453;191454;191455;191456;191457;191458;191459;191460;191461 191457 18 LEVEANNAFDQYR Unmodified 1567.7267 0.72668527 1525 P47756 CAPZB F-actin-capping protein subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.728 64.815 2 1.4813E-13 74065 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 169.37 153.24 275630000 0 0 0 11078000 12824000 30783000 12523000 13359000 12593000 23084000 31708000 32141000 17899000 22142000 55491000 28640 1525 26166 240824;240825;240826;240827;240828;240829;240830;240831;240832;240833;240834;240835 191462;191463;191464;191465;191466;191467;191468;191469;191470;191471;191472;191473 191467 12 LEVEINK Unmodified 843.47018 0.47018322 5370 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 2 2 1 2 2 2 2 2 2 38.178 38.24 2 0.02225 42277 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 105.27 0 + 131160000 0 0 0 12248000 12029000 8311200 16168000 15577000 0 17219000 23933000 0 15417000 10255000 0 28641 5370 26167 240836;240837;240838;240839;240840;240841;240842;240843;240844;240845;240846;240847;240848;240849;240850;240851;240852 191474;191475;191476;191477;191478;191479;191480;191481 191474 8 LEVEYEQK Unmodified 1036.5077 0.50769094 5123 Q9Y2W2 WBP11 WW domain-binding protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.17 3.18 1 2 9 1 2 1 1 1 1 1 1 1 1 1 34.25 33.171 2 0.0025649 41506 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.46 55.419 527630000 222740 281040000 0 0 18420000 19812000 25084000 0 20966000 34527000 37473000 40061000 26337000 23692000 0 28642 5123 26168 240853;240854;240855;240856;240857;240858;240859;240860;240861;240862;240863;240864 191482;191483;191484;191485;191486;191487;191488;191489;191490;191491;191492 191486 9 LEVFTTPK Unmodified 933.51713 0.51713341 3601 Q8WYP5 AHCTF1 Protein ELYS yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 53.655 53.802 2 0.048162 61211 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 47.574 25.083 30187000 0 0 0 0 0 0 7722000 10958000 0 0 0 0 0 11507000 0 28643 3601 26169 240865;240866;240867 191493 191493 1 LEVGEVR Unmodified 800.43922 0.43921744 2463 Q14C86 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 31.28 31.397 2 0.050331 32707 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.717 7.2762 83645000 0 0 0 22476000 2692000 0 0 0 0 0 0 0 16796000 16020000 25661000 28644 2463 26170 240868;240869;240870;240871;240872 191494 191494 1 LEVLESQLSEGSQK Unmodified 1545.7886 0.78861683 4214 Q9BWT6 MND1 Meiotic nuclear division protein 1 homolog yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 64.608 59.276 2 5.6269E-44 76003 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 215.04 175.1 39151000 0 39151000 0 0 0 0 0 0 0 0 0 0 0 0 0 28645 4214 26171 240873;240874 191495;191496 191495 2 LEVNEAELLR Unmodified 1184.6401 0.6401021 2911 Q6NZI2 PTRF Polymerase I and transcript release factor yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 71.253 71.316 2 0.0052248 82285 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 69.812 32.084 14895000 0 0 0 0 1981800 0 0 0 0 3204700 0 4849400 2941400 1918000 0 28646 2911 26172 240875;240876;240877;240878;240879 191497;191498 191498 2 LEVNLQAMK Unmodified 1044.5638 0.56376603 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 63.938 64.122 2 0.0061449 73805 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 75.854 22.688 99971000 0 0 0 0 7013300 0 7625900 5721800 0 12181000 10306000 15375000 12483000 9846900 19418000 28647 1356 26173 240880;240881;240882;240883;240884;240885;240886;240887;240888 191499;191500;191501;191502;191503;191504 191504 4 LEVNLQAMK Oxidation (M) 1060.5587 0.55868065 1356 P35579 MYH9 Myosin-9 yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 44.974 45.52 2 0.012666 51067 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 54.157 7.7314 19358000 0 0 0 0 0 0 0 0 0 0 0 8811300 10546000 0 0 28648 1356 26173 240889;240890 191505 191505 2081 1 LEVNMQALK Unmodified 1044.5638 0.56376603 1366 P35749 MYH11 Myosin-11 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 64.377 64.199 2 0.027353 73783 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 49.442 0 12198000 0 0 0 0 7013300 0 0 0 5184600 0 0 0 0 0 0 28649 1366 26174 240891;240892 191506;191507 191507 2 LEVPDMNIR Unmodified 1085.5539 0.55392962 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 71.206 71.4 2 0.019448 81161 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 53.968 3.2645 41908000 0 0 0 0 0 9848500 0 0 0 0 0 0 0 12171000 19888000 28650 2172 26175 240893;240894;240895 191508;191509;191510 191510 3 LEVPDMNIRGPK Unmodified 1367.7231 0.72312022 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.29 65.377 3 0.0018157 74446 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 62.408 55.278 173460000 0 0 0 7068700 5231100 12077000 7277900 15983000 15905000 14657000 14622000 19324000 13866000 14439000 33012000 28651 2172 26176 240896;240897;240898;240899;240900;240901;240902;240903;240904;240905;240906;240907 191511;191512;191513;191514;191515;191516;191517;191518;191519;191520 191514 9 LEVPDMNIRGPK Oxidation (M) 1383.718 0.71803484 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 47.008 46.856 3 0.0018181 52808 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 54.772 38.3 35845000 0 0 0 5797100 7446800 0 0 9611000 0 0 0 0 12990000 0 0 28652 2172 26176 240908;240909;240910;240911 191521;191522 191521 3524 2 LEVPEDIR Unmodified 969.51311 0.51311067 4947 Q9UJX6 ANAPC2 Anaphase-promoting complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 54.063 54.275 2 0.02313 60381 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.59 32.372 38978000 0 0 0 4920300 0 4192100 0 0 0 4250700 5503300 6804800 0 6252200 7055000 28653 4947 26177 240912;240913;240914;240915;240916;240917;240918 191523 191523 1 LEVPSEFLQDETVADTNK Unmodified 2033.9793 0.97933072 3599 Q8WYA0 IFT81 Intraflagellar transport protein 81 homolog yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 82.558 82.663 2 0.00039416 95677 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 72.089 58.889 16562000 0 0 0 0 1544500 0 979130 2504200 1565200 3483500 2995300 3490400 0 0 0 28654 3599 26178 240919;240920;240921;240922;240923;240924;240925;240926 191524;191525;191526;191527 191527 4 LEVQAEEERK Unmodified 1229.6252 0.62518031 4376 Q9H307 PNN Pinin yes yes 0 0 1 By MS/MS 3 0 1 1 22.582 18.694 3 0.011611 23327 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 66.056 42.736 7894900 0 7894900 0 0 0 0 0 0 0 0 0 0 0 0 0 28655 4376 26179 240927 191528 191528 0 LEVQATDREENK Unmodified 1430.7001 0.70013617 945 P11387 TOP1 DNA topoisomerase 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.08 1 1 22 2 1 2 2 2 2 2 2 2 2 2 2 1 18.808 18.662 2;3 7.5631E-05 18694 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 87.667 59.307 146330000 0 33609000 0 1160200 8833600 9677200 12122000 9468900 9055600 11032000 9944900 14772000 8428500 6690500 11541000 28656 945 26180 240928;240929;240930;240931;240932;240933;240934;240935;240936;240937;240938;240939;240940;240941;240942;240943;240944;240945;240946;240947;240948;240949;240950;240951 191529;191530;191531;191532;191533;191534;191535;191536;191537;191538;191539;191540;191541 191540 13 LEVQYSNDIMR Oxidation (M) 1382.65 0.65001485 5344 yes yes 0 1 0 By matching By MS/MS 10 0 3 1 2 52.684 53.009 2 0.017833 59824 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 40.002 16.573 + 431150000 0 0 0 0 0 0 0 0 0 0 23275000 0 407870000 0 0 28657 5344 26181 240952;240953;240954 191542 191542 6735 1 LEVSELATVK Unmodified 1087.6125 0.61249036 1498 P46100 ATRX Transcriptional regulator ATRX yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 65.108 64.226 2 0.0059744 81715 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.213 39.252 108460000 0 71997000 0 0 0 3908900 0 3455200 2865800 5569500 4365600 0 4300200 3940400 8062100 28658 1498 26182 240955;240956;240957;240958;240959;240960;240961;240962;240963;240964 191543;191544 191543 2 LEVTEIVKPSPK Unmodified 1338.7759 0.7758673 3111 Q7Z6E9 RBBP6 E3 ubiquitin-protein ligase RBBP6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.359 56.484 3 0.0032811 64068 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 56.122 41.091 132710000 0 0 0 5969300 9059800 9050000 9402700 9217200 10427000 12777000 14806000 14047000 10952000 10112000 16892000 28659 3111 26183 240965;240966;240967;240968;240969;240970;240971;240972;240973;240974;240975;240976 191545;191546;191547;191548;191549;191550;191551;191552;191553;191554 191547 10 LEVVDKSQVSR Unmodified 1258.6881 0.68811492 3722 Q969R5 L3MBTL2 Lethal(3)malignant brain tumor-like protein 2 yes yes 0 0 1 By MS/MS 10 0 1 1 34.841 34.996 3 0.021031 38468 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 31.431 1.6237 14307000 0 0 0 0 0 0 0 0 0 14307000 0 0 0 0 0 28660 3722 26184 240977 191555 191555 1 LEVVRMTQQQENPK Unmodified 1698.8723 0.87230365 2228 Q13045 FLII Protein flightless-1 homolog yes yes 0 0 1 By MS/MS 2 0 1 1 49.595 41.77 3 0.021137 57746 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.621 35.456 70146000 70146000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28661 2228 26185 240978 191556 191556 0 LEVVRMTQQQENPK Oxidation (M) 1714.8672 0.86721827 2228 Q13045 FLII Protein flightless-1 homolog yes yes 0 1 1 By MS/MS 2 0 1 1 28.974 25.82 3 0.011134 32806 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 44.457 18.927 10547000 0 0 10547000 0 0 0 0 0 0 0 0 0 0 0 0 28662 2228 26185 240979 191557 191557 3620 1 LEWAYGYR Unmodified 1056.5029 0.50288033 4505 Q9HC35 EML4 Echinoderm microtubule-associated protein-like 4 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 64.502 64.999 2 0.011827 73759 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.035 58.049 13371000 0 0 0 0 0 0 0 0 0 0 0 3617900 0 0 9752800 28663 4505 26186 240980;240981 191558;191559 191558 2 LEWPLTEVAEGVFETEAPGGYK Unmodified 2421.174 0.17400778 4506 Q9HC38 GLOD4 Glyoxalase domain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 99.88 95.225 2;3 1.5978E-19 118642 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 119.95 115.06 37433000 15078000 20959000 1397000 0 0 0 0 0 0 0 0 0 0 0 0 28664 4506 26187 240982;240983;240984;240985 191560;191561;191562;191563;191564 191564 5 LEWVQDNIR Unmodified 1171.5986 0.59857163 601 O94906 PRPF6 Pre-mRNA-processing factor 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 65.25 64.645 2 0.005264 74897 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 78.516 54.361 13258000 0 0 0 6772400 6485300 0 0 0 0 0 0 0 0 0 0 28665 601 26188 240986;240987;240988;240989;240990;240991 191565;191566;191567;191568;191569;191570;191571 191570 7 LEYDDLR Unmodified 922.43961 0.43961137 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 42.995 43.023 2 0.025177 48872 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 81.297 26.772 33807000 0 0 0 10358000 0 0 0 15113000 2686700 0 0 0 5649300 0 0 28666 1029 26189 240992;240993;240994;240995 191572 191572 1 LEYGDNAEK Unmodified 1037.4666 0.46655441 5076 Q9Y224 C14orf166 UPF0568 protein C14orf166 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 17.562 17.719 2 0.016563 17606 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 56.432 7.8703 282050000 0 0 0 17868000 19614000 20992000 20363000 18376000 11382000 36276000 0 40076000 25778000 24810000 46514000 28667 5076 26190 240996;240997;240998;240999;241000;241001;241002;241003;241004;241005;241006 191573;191574;191575;191576;191577 191576 3 LEYGGLGR Unmodified 863.45012 0.45011648 3796 Q96DG6 CMBL Carboxymethylenebutenolidase homolog yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 40.058 40.273 2 0.0058676 44623 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 105.2 62.482 185820000 0 0 0 0 7285300 0 11858000 9687400 9668700 0 47305000 52857000 17219000 29940000 0 28668 3796 26191 241007;241008;241009;241010;241011;241012;241013;241014 191578;191579;191580 191578 3 LEYHQVIQQMEQK Unmodified 1672.8243 0.82429083 1992 P80303 NUCB2 Nucleobindin-2;Nesfatin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 5 2 1 2 69.752 63.796 2;3 3.6518E-36 84338 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 180.2 145.67 124540000 48757000 64737000 11050000 0 0 0 0 0 0 0 0 0 0 0 0 28669 1992 26192 241015;241016;241017;241018;241019 191581;191582;191583;191584;191585 191584 4 LEYLSLVSK Unmodified 1050.5961 0.59611202 2414 Q14562 DHX8 ATP-dependent RNA helicase DHX8 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 79.308 75.737 2 0.0074778 94330 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.668 70.445 46976000 0 43606000 3369600 0 0 0 0 0 0 0 0 0 0 0 0 28670 2414 26193 241020;241021;241022 191586;191587;191588 191586 3 LEYNYNSHNVYIMADK Unmodified 1972.8989 0.89891233 110 CON__Q9U6Y5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 71.997 66.19 3 6.8343E-39 84993 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.97 101.49 + 95168000 25771000 64914000 4482800 0 0 0 0 0 0 0 0 0 0 0 0 28671 110 26194 241023;241024;241025 191589;191590;191591;191592 191590 4 LEYNYNSHNVYIMADK Oxidation (M) 1988.8938 0.89382695 110 CON__Q9U6Y5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 62.284 56.252 3 0.0025219 73072 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 54.768 44.668 + 21541000 16189000 0 5352700 0 0 0 0 0 0 0 0 0 0 0 0 28672 110 26194 241026;241027;241028 191593;191594 191593 143 2 LEYNYNSHNVYIMADKQK Unmodified 2229.0525 0.052452861 110 CON__Q9U6Y5 yes yes 0 0 1 By MS/MS 2 0 2 2 67.025 58.73 3;4 0.00022513 78917 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.507 47.429 + 62052000 62052000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28673 110 26195 241029;241030 191595;191596;191597 191596 2 LEYVMSK Unmodified 868.43644 0.43644025 3188 Q86X27 RALGPS2 Ras-specific guanine nucleotide-releasing factor RalGPS2 yes yes 0 0 0 By MS/MS 2 0 1 1 41.817 36.721 2 0.030767 47730 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.906 24.913 13509000 0 13509000 0 0 0 0 0 0 0 0 0 0 0 0 0 28674 3188 26196 241031 191598;191599 191598 2 LFACEEHPSHK Unmodified 1353.6136 0.61356977 4983 Q9UL15 BAG5 BAG family molecular chaperone regulator 5 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 21.512 18.709 2;3 0.00014035 27361 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 116.52 73.435 5236700 0 0 5236700 0 0 0 0 0 0 0 0 0 0 0 0 28675 4983 26197 241032;241033 191600;191601 191600 2 LFACMNPATDVGK Unmodified 1422.6636 0.66355643 4641 Q9NU22 MDN1 Midasin yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 67.292 67.458 2 0.038373 77764 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 39.873 31.638 7221400 0 0 0 0 0 0 0 0 0 0 0 0 3505600 3715800 0 28676 4641 26198 241034;241035 191602 191602 1 LFACMNPATDVGK Oxidation (M) 1438.6585 0.65847105 4641 Q9NU22 MDN1 Midasin yes yes 0 1 0 By MS/MS By matching By matching 10 0 3 1 1 1 51.805 52.202 2 0.023295 58597 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 50.452 11.647 13803000 0 0 0 0 0 0 0 0 0 0 0 5252900 5132700 3417300 0 28677 4641 26198 241036;241037;241038 191603 191603 0 LFADAEEEQRR Unmodified 1362.6528 0.65279205 1504 P46459 NSF Vesicle-fusing ATPase yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 30.447 30.48 3 0.038773 31864 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 22.232 9.095 33191000 0 0 0 4983100 2388600 0 3316100 3888400 3977000 0 0 0 8169700 6468400 0 28678 1504 26199 241039;241040;241041;241042;241043;241044;241045 191604;191605 191604 2 LFADAVQELLPQYK Unmodified 1633.8716 0.87155859 1334 P33993 MCM7 DNA replication licensing factor MCM7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.3 3.85 5 1 4 1 4 1 1 1 1 1 93.864 91.081 2;3 1.0561E-07 105820 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 117.7 91.76 372570000 67726000 285440000 3969700 0 0 1151800 0 0 0 2499300 2098800 0 0 0 9678600 28679 1334 26200 241046;241047;241048;241049;241050;241051;241052;241053;241054;241055 191606;191607;191608;191609;191610;191611 191608 6 LFAEAVQK Unmodified 904.50182 0.5018177 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39.353 38.451 2 0.012121 47884 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 101.69 44.589 1007600000 77046000 666090000 100280000 7560300 10840000 9900500 11790000 9114000 7754900 12092000 17596000 21402000 11606000 13771000 30716000 28680 1300 26201 241056;241057;241058;241059;241060;241061;241062;241063;241064;241065;241066;241067;241068;241069;241070 191612;191613;191614;191615;191616 191615 5 LFAECHVINPSK Unmodified 1413.7075 0.70747015 5212 Q9Y4X5 ARIH1 E3 ubiquitin-protein ligase ARIH1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 50.715 49.464 3 0.00016168 54668 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 70.622 61.334 359580000 176640000 24717000 20618000 6124800 5276700 10088000 0 4851300 10706000 0 21004000 25905000 18516000 13082000 22048000 28681 5212 26202 241071;241072;241073;241074;241075;241076;241077;241078;241079;241080;241081;241082;241083 191617;191618;191619;191620;191621;191622;191623;191624;191625;191626 191626 10 LFAELEIK Unmodified 961.54843 0.54843354 562 O75937 DNAJC8 DnaJ homolog subfamily C member 8 yes yes 0 0 0 By MS/MS 2 0 1 1 83.058 74.927 2 0.028816 97862 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.282 30.912 32201000 32201000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28682 562 26203 241084 191627 191627 1 LFAIEEETTTR Unmodified 1308.6561 0.65614609 4897 Q9UHD2 TBK1 Serine/threonine-protein kinase TBK1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 62.624 62.902 2 0.00032275 71078 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.247 59.438 10482000 0 0 0 0 0 4618600 0 0 0 0 0 0 0 0 5863500 28683 4897 26204 241085;241086;241087;241088 191628;191629;191630 191629 3 LFALVLR Unmodified 830.53781 0.53780928 4982 Q9UL03;Q5JSJ4 INTS6;DDX26B Integrator complex subunit 6;Protein DDX26B yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 82.845 82.918 2 0.023833 96011 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 84.025 21.686 28364000 0 0 0 1077900 0 4369700 2322800 2790900 3799300 3290400 0 0 0 4148500 6564700 28684 4982 26205 241089;241090;241091;241092;241093;241094;241095;241096 191631;191632 191631 2 LFAMEFVK Oxidation (M) 999.50994 0.50993955 3246 Q8IWV7 UBR1 E3 ubiquitin-protein ligase UBR1 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 73.425 67.718 2 0.025266 83366 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 77.058 52.426 19518000 13884000 0 5634700 0 0 0 0 0 0 0 0 0 0 0 0 28685 3246 26206 241097;241098 191633 191633 1 LFAMEFVK Unmodified 983.51502 0.51502492 3246 Q8IWV7 UBR1 E3 ubiquitin-protein ligase UBR1 yes yes 0 0 0 By MS/MS 2 0 1 1 84.856 82.423 2 0.02908 99863 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 77.058 46.873 4903000 0 0 4903000 0 0 0 0 0 0 0 0 0 0 0 0 28686 3246 26206 241099 191634 191634 1 LFAPQQILQCSPAN Unmodified 1585.7923 0.79226242 778 P04183 TK1 Thymidine kinase, cytosolic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 86.329 85.303 2 4.7358E-24 103852 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 132.25 117.29 516750000 15551000 331900000 0 6122300 14554000 13549000 10596000 13080000 12337000 14012000 17616000 19490000 13003000 14064000 20872000 28687 778 26207 241100;241101;241102;241103;241104;241105;241106;241107;241108;241109;241110;241111;241112;241113;241114 191635;191636;191637;191638;191639;191640;191641;191642;191643;191644;191645;191646;191647;191648 191637 14 LFATKPELLDYK Unmodified 1436.7915 0.79151736 2834 Q5VZL5 ZMYM4 Zinc finger MYM-type protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 72.48 72.643 3 0.015677 82954 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.516 28.019 28709000 0 0 0 0 0 4931500 0 0 4017900 0 0 0 4204600 4696800 10858000 28688 2834 26208 241115;241116;241117;241118;241119 191649 191649 1 LFAWADPTGTR Unmodified 1233.6142 0.6142217 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By MS/MS 10 0 1 1 76.008 76.212 2 0.024594 88053 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 56.258 31.335 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28689 3023 26209 241120 191650 191650 1 LFAWADPTGTRK Unmodified 1361.7092 0.70918471 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.784 65.87 3 0.0017726 75613 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 48.044 41.005 163290000 0 0 0 4902100 5940700 14535000 9060400 16997000 10891000 12479000 10820000 24248000 14670000 15844000 22899000 28690 3023 26210 241121;241122;241123;241124;241125;241126;241127;241128;241129;241130;241131;241132 191651;191652;191653;191654;191655;191656;191657;191658;191659;191660;191661;191662;191663 191652 13 LFAYPDTHR Unmodified 1118.5509 0.55089316 768 P04040 CAT Catalase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 43.178 42.991 2 0.0030483 48012 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 91.318 74.778 38752000 0 0 0 19004000 0 0 0 19748000 0 0 0 0 0 0 0 28691 768 26211 241133;241134;241135 191664;191665;191666;191667 191665 4 LFCVGFTK Unmodified 970.49462 0.49462383 1842 P61247 RPS3A 40S ribosomal protein S3a yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.946 70.023 2 0.0075386 80076 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 89.296 89.296 147230000 0 0 0 4082300 11960000 11414000 6376200 15581000 7979200 12520000 11407000 21421000 12082000 14844000 17559000 28692 1842 26212 241136;241137;241138;241139;241140;241141;241142;241143;241144;241145;241146;241147 191668;191669;191670;191671;191672;191673;191674;191675 191674 7 LFDAPEAPLPSRK Unmodified 1439.7773 0.77726428 1454 P42345 MTOR Serine/threonine-protein kinase mTOR yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63.239 62.084 3 0.0007448 70761 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 59.227 52.346 193350000 71133000 12871000 4244200 7249600 0 11721000 6631900 9706500 6474700 11379000 9647500 16431000 7678100 7935200 10249000 28693 1454 26213 241148;241149;241150;241151;241152;241153;241154;241155;241156;241157;241158;241159;241160;241161;241162 191676;191677;191678;191679;191680;191681;191682;191683;191684;191685;191686;191687;191688;191689;191690 191676 14 LFDAPLSISK Unmodified 1089.607 0.60701105 44;4563 C4AMC7;Q6VEQ5;A8K0Z3;A8MWX3;Q9NQA3 WASH3P;WASH2P;WASH1;WASH4P;WASH6P Putative WAS protein family homolog 3;WAS protein family homolog 2;WAS protein family homolog 1;Putative WAS protein family homolog 4;WAS protein family homolog 6 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.37 3.17 3 1 15 1 2 1 1 2 1 1 1 1 2 1 1 2 1 1 76.591 75.631 2 0.0021904 87859 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 85.731 58.769 377470000 38116000 153500000 27027000 6475900 9569400 14708000 11041000 10215000 8588600 18387000 15064000 17451000 13044000 9937200 24340000 28694 44;4563 26214 241163;241164;241165;241166;241167;241168;241169;241170;241171;241172;241173;241174;241175;241176;241177;241178;241179;241180;241181 191691;191692;191693;191694;191695;191696;191697;191698;191699;191700;191701;191702;191703;191704 191703 14 LFDATLTQYVK Unmodified 1297.6918 0.69180331 2753 Q5R3I4 TTC38 Tetratricopeptide repeat protein 38 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 6.57 3.96 3 4 1 1 1 1 1 1 1 82.668 80.174 2 2.5835E-07 99894 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.07 78.986 119360000 12619000 88873000 8622300 0 0 0 0 0 0 2962600 3654400 0 2630700 0 0 28695 2753 26215 241182;241183;241184;241185;241186;241187;241188 191705;191706;191707;191708;191709;191710 191705 6 LFDAVNTK Unmodified 906.48108 0.48108226 2786 Q5T8P6 RBM26 RNA-binding protein 26 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.44 3.62 4 2 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 41.899 40.27 2 0.00070974 45367 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 150.84 86.06 1302100000 55320000 302280000 31880000 55072000 56312000 67338000 79878000 65698000 68689000 80784000 90174000 101600000 78618000 63991000 104440000 28696 2786 26216 241189;241190;241191;241192;241193;241194;241195;241196;241197;241198;241199;241200;241201;241202;241203;241204;241205;241206 191711;191712;191713;191714;191715;191716;191717;191718;191719;191720;191721;191722 191716 11 LFDDCTQQFK Unmodified 1300.5758 0.57578728 2275 Q13362 PPP2R5C Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.4 3.2 1 4 1 1 1 1 1 54.999 54.047 2 9.281E-06 67962 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.03 131.03 124320000 0 99634000 0 0 0 2390000 0 0 0 3324000 0 0 0 12840000 6129700 28697 2275 26217 241207;241208;241209;241210;241211 191723;191724;191725 191724 3 LFDDCTQQYK Unmodified 1316.5707 0.5707019 2442 Q14738 PPP2R5D Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 46.454 40.69 2 0.0033262 56092 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.027 87.984 12672000 9806100 0 2865900 0 0 0 0 0 0 0 0 0 0 0 0 28698 2442 26218 241212;241213 191726 191726 1 LFDDDETGK Unmodified 1038.4506 0.45056999 1431 P41208;Q12798 CETN2;CETN1 Centrin-2;Centrin-1 yes no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 29.67 28.523 2 0.0052256 30595 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.713 31.864 149550000 5294300 91237000 0 0 5262800 5080700 5530600 0 0 0 9756700 0 0 13023000 14364000 28699 1431 26219 241214;241215;241216;241217;241218;241219;241220;241221 191727;191728 191728 2 LFDDEASVDEPR Unmodified 1391.6205 0.62048887 3466 Q8NI35 INADL InaD-like protein yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 51.791 52.468 2 0.024885 58450 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.238 29.544 8513000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8513000 28700 3466 26220 241222;241223 191729;191730 191729 2 LFDDLTSSYK Unmodified 1187.571 0.57101948 2504 Q15172 PPP2R5A Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 72.095 67.535 2 0.02041 85667 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.485 45.702 189910000 0 185230000 4676200 0 0 0 0 0 0 0 0 0 0 0 0 28701 2504 26221 241224;241225 191731;191732;191733 191731 3 LFDDSDER Unmodified 995.4196 0.41960421 360 O43719 HTATSF1 HIV Tat-specific factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.23 27.428 2 0.036499 29342 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 51.854 16.221 241860000 0 0 0 11128000 11707000 16639000 11224000 12143000 11622000 14627000 23079000 29591000 29527000 31797000 38770000 28702 360 26222 241226;241227;241228;241229;241230;241231;241232;241233;241234;241235;241236;241237 191734;191735;191736;191737 191734 4 LFDDVPQVR Unmodified 1087.5662 0.56620887 3204 Q86Y56 DNAAF5 Dynein assembly factor 5, axonemal yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.005 65.093 2 0.0040115 74751 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 97.798 72.224 348260000 0 0 0 21136000 18675000 29402000 23043000 25691000 14796000 31747000 29474000 48407000 28867000 31460000 45560000 28703 3204 26223 241238;241239;241240;241241;241242;241243;241244;241245;241246;241247;241248;241249 191738;191739;191740;191741;191742;191743;191744;191745;191746;191747;191748;191749;191750;191751 191748 14 LFDDVPQVRR Unmodified 1243.6673 0.6673199 3204 Q86Y56 DNAAF5 Dynein assembly factor 5, axonemal yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 54.573 54.675 3 0.0024609 62069 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 52.79 29.872 82888000 0 0 0 6216500 5706000 7925100 0 8824200 0 8747100 0 11067000 10362000 10304000 13736000 28704 3204 26224 241250;241251;241252;241253;241254;241255;241256;241257;241258 191752;191753;191754;191755;191756;191757;191758 191755 7 LFDEEEDSSEK Unmodified 1326.5463 0.54632087 360 O43719 HTATSF1 HIV Tat-specific factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32.08 31.455 2 3.7276E-09 38262 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 152.28 140.92 340460000 16516000 168560000 0 8423700 7098800 6429300 7979000 5093300 5719400 16460000 16089000 22451000 17634000 18831000 23169000 28705 360 26225 241259;241260;241261;241262;241263;241264;241265;241266;241267;241268;241269;241270;241271;241272 191759;191760;191761;191762;191763;191764;191765;191766;191767;191768;191769;191770;191771 191763 13 LFDFPGR Unmodified 850.43374 0.43373813 4806 Q9P258 RCC2 Protein RCC2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.622 70.694 2 0.043924 82038 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 67.035 56.728 108410000 0 0 0 7278400 5465900 5947400 7095400 8753100 5336700 9955200 11976000 13155000 6230700 6943200 20270000 28706 4806 26226 241273;241274;241275;241276;241277;241278;241279;241280;241281;241282;241283;241284 191772 191772 1 LFDFVNAK Unmodified 952.50182 0.5018177 2163 Q08945 SSRP1 FACT complex subunit SSRP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 79.58 74.394 2 0.03028 90633 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 76.035 56.557 411630000 14165000 221700000 175770000 0 0 0 0 0 0 0 0 0 0 0 0 28707 2163 26227 241285;241286;241287 191773;191774 191774 2 LFDHPESPTPNPTEPLFLAQAEVYK Unmodified 2839.4069 0.40686127 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS 10 0 1 1 89.42 89.563 3 0.001935 103598 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 25.819 23.17 6285800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6285800 28708 1565 26228 241288 191775 191775 1 LFDIKPEQQR Unmodified 1272.6826 0.68263561 681 O95707 POP4 Ribonuclease P protein subunit p29 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 49.005 49.134 3 0.02575 54521 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 40.589 9.4037 32202000 0 0 0 0 0 11567000 8756400 5200000 0 0 0 0 0 6678300 0 28709 681 26229 241289;241290;241291;241292 191776 191776 1 LFDLLNK Unmodified 861.496 0.49600404 4043 Q99661 KIF2C Kinesin-like protein KIF2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 81.273 76.136 2 0.012128 95748 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.89 16.649 152680000 89118000 40095000 23470000 0 0 0 0 0 0 0 0 0 0 0 0 28710 4043 26230 241293;241294;241295 191777;191778;191779 191777 3 LFDLLYPEK Unmodified 1136.6118 0.61176208 4998 Q9ULK4 MED23 Mediator of RNA polymerase II transcription subunit 23 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 3 9 1 1 1 1 1 1 1 1 1 1 1 1 86.097 84.91 2 0.0074131 106630 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.25 71.068 54597000 10320000 14921000 2188200 0 0 3451800 0 3029100 2020500 3258000 2789400 2768100 1900600 2023400 5926500 28711 4998 26231 241296;241297;241298;241299;241300;241301;241302;241303;241304;241305;241306;241307 191780;191781;191782;191783;191784;191785;191786;191787;191788;191789 191782 10 LFDQAFGLPR Unmodified 1162.6135 0.61349341 786 P04792 HSPB1 Heat shock protein beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.74 2.92 3 16 1 1 1 2 1 2 1 1 1 1 1 1 2 2 1 81.602 81.637 2 5.8768E-12 94324 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 163.77 115.27 11303000000 3735500 1883000 618920 359110000 312330000 870230000 564340000 941960000 601580000 1211800000 1139100000 1213800000 629920000 767710000 2685300000 28712 786 26232 241308;241309;241310;241311;241312;241313;241314;241315;241316;241317;241318;241319;241320;241321;241322;241323;241324;241325;241326 191790;191791;191792;191793;191794;191795;191796;191797;191798;191799;191800;191801;191802;191803;191804;191805;191806;191807;191808;191809;191810;191811;191812 191805 22 LFDRPQELK Unmodified 1144.6241 0.6240581 2830 Q5VZ89 DENND4C DENN domain-containing protein 4C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 43.161 43.335 3 0.043765 48451 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 38.567 19.324 187190000 0 0 0 0 21780000 0 26169000 28929000 21213000 0 0 0 41160000 27404000 20534000 28713 2830 26233 241327;241328;241329;241330;241331;241332;241333 191813 191813 1 LFDSDPITVTVPVEVSR Unmodified 1872.9833 0.98329389 931 P10909 CLU Clusterin;Clusterin beta chain;Clusterin alpha chain yes yes 0 0 0 By MS/MS 10 0 1 1 87.891 88.001 2 0.012974 102160 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 41.54 30.328 2213700 0 0 0 0 0 0 0 0 0 2213700 0 0 0 0 0 28714 931 26234 241334 191814 191814 1 LFDSDPITVTVPVEVSRK Unmodified 2001.0783 0.078256906 931 P10909 CLU Clusterin;Clusterin beta chain;Clusterin alpha chain yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 7.91 3.42 2 1 8 2 1 1 1 1 1 1 1 1 1 83.838 82.955 3 6.3914E-06 95907 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 70.96 55.435 96187000 0 27256000 3175900 0 3573100 5710400 0 4996100 4282500 8694000 6677300 7517600 0 0 24304000 28715 931 26235 241335;241336;241337;241338;241339;241340;241341;241342;241343;241344;241345 191815;191816;191817;191818;191819;191820;191821;191822;191823;191824;191825 191815 11 LFDSICNNK Unmodified 1109.5175 0.51754412 872;790 P04899;P08754 GNAI2;GNAI3 Guanine nucleotide-binding protein G(i) subunit alpha-2;Guanine nucleotide-binding protein G(k) subunit alpha no no 0 0 0 By MS/MS By matching By MS/MS 7.33 3.77 1 2 1 1 1 46.36 46.194 2 0.034875 50757 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 46.334 18.452 7824000 0 0 0 3851700 0 0 0 0 0 0 0 0 0 3972300 0 28716 790;872 26236 241346;241347;241348 191826;191827 191827 2 LFDSTIADEGTWTLEDRK Unmodified 2096.0062 0.006214175 3561 Q8WVJ2 NUDCD2 NudC domain-containing protein 2 yes yes 0 0 1 By MS/MS 2 0 1 1 85.476 77.345 3 6.5685E-12 101037 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 105.9 43.429 73658000 73658000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28717 3561 26237 241349 191828 191828 0 LFDSTTLEHQK Unmodified 1317.6565 0.65648044 2273 Q13347 EIF3I Eukaryotic translation initiation factor 3 subunit I yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.83 3.5 4 1 13 2 2 1 1 1 1 1 1 1 1 1 2 1 1 1 44.946 43.794 2;3 6.0676E-11 48831 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 126.71 97.157 2943400000 131240000 1236500000 658230000 43679000 36119000 55507000 46865000 53601000 42655000 66840000 121360000 117410000 87730000 86115000 159540000 28718 2273 26238 241350;241351;241352;241353;241354;241355;241356;241357;241358;241359;241360;241361;241362;241363;241364;241365;241366;241367 191829;191830;191831;191832;191833;191834;191835;191836;191837;191838;191839;191840;191841;191842;191843;191844;191845;191846 191841 16 LFDTLNEDLFQK Unmodified 1481.7402 0.74021007 1550 P48723 HSPA13 Heat shock 70 kDa protein 13 yes yes 0 0 0 By MS/MS 2 0 1 1 90.002 85.13 2 0.0053133 105846 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.957 78.35 33711000 0 33711000 0 0 0 0 0 0 0 0 0 0 0 0 0 28719 1550 26239 241368 191847 191847 1 LFDVCGSQDFESDLDRLK Unmodified 2142.9892 0.9891839 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 89.118 83.447 3 2.5803E-05 101664 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 76.151 67.791 67898000 58923000 8974400 0 0 0 0 0 0 0 0 0 0 0 0 0 28720 3676 26240 241369;241370 191848;191849 191848 2 LFEAEAQDLFR Unmodified 1337.6616 0.66156582 4357 Q9H223 EHD4 EH domain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 82.194 82.358 2 0.00071015 95465 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 103.7 60.454 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28721 4357 26241 241371;241372;241373;241374;241375 191850;191851;191852;191853;191854 191854 5 LFEAEEQDLFK Unmodified 1367.6609 0.66089712 4403 Q9H4M9 EHD1 EH domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 2 2 1 83.323 77.962 2 4.0744E-09 97697 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 156.83 121.56 364570000 48172000 306540000 9857400 0 0 0 0 0 0 0 0 0 0 0 0 28722 4403 26242 241376;241377;241378;241379;241380 191855;191856;191857;191858 191855 3 LFEALTK Unmodified 820.46945 0.46945494 4262 Q9BZE2 PUS3 tRNA pseudouridine(38/39) synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 60.543 54.559 2 0.031783 73807 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.029 47.177 75538000 32384000 27968000 15186000 0 0 0 0 0 0 0 0 0 0 0 0 28723 4262 26243 241381;241382;241383 191859;191860 191860 2 LFEAPNFFQK Unmodified 1239.6288 0.62880913 1644 P51003 PAPOLA Poly(A) polymerase alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 84.214 83.013 2 0.00080802 104910 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 114.5 102.14 138040000 42645000 25111000 5722700 1542800 1692100 10163000 3186800 4837500 3336200 10046000 5190200 0 3940500 6979600 13651000 28724 1644 26244 241384;241385;241386;241387;241388;241389;241390;241391;241392;241393;241394;241395;241396;241397;241398 191861;191862;191863;191864;191865;191866;191867;191868;191869;191870;191871 191868 10 LFEAQEK Unmodified 863.43888 0.43888309 1579 P49589 CARS Cysteine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 23.87 23.092 2 0.024481 23388 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 97.068 32.264 312870000 0 273580000 6149900 2340900 2221400 0 0 3405600 0 0 0 0 3980300 5641600 15548000 28725 1579 26245 241399;241400;241401;241402;241403;241404;241405;241406 191872;191873;191874 191873 3 LFEAQGKPELK Unmodified 1258.6921 0.69213767 4643 Q9NUG6 PDRG1 p53 and DNA damage-regulated protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.869 42.045 3 0.0040545 45739 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.314 42.14 92272000 0 0 0 3028500 4307200 5149600 6822600 4717100 3685600 6600700 13553000 13431000 8335000 7709100 14933000 28726 4643 26246 241407;241408;241409;241410;241411;241412;241413;241414;241415;241416;241417;241418 191875;191876;191877;191878;191879;191880;191881;191882;191883 191878 9 LFEAVEEGR Unmodified 1048.5189 0.51892433 323 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.834 47.997 2 0.0032531 54190 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 90.657 31.451 863020000 0 0 0 42066000 51736000 57295000 60901000 58498000 57280000 85959000 91883000 102090000 81309000 62800000 111210000 28727 323 26247 241419;241420;241421;241422;241423;241424;241425;241426;241427;241428;241429;241430 191884;191885;191886;191887;191888;191889;191890;191891;191892;191893;191894;191895;191896 191884 13 LFEDDDSNEK Unmodified 1210.499 0.49897675 360 O43719 HTATSF1 HIV Tat-specific factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 25.466 24.696 2 8.3253E-05 29838 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.33 89.208 254100000 14089000 109710000 0 7136300 6409200 5210000 4713000 5449400 3448200 15046000 10617000 19054000 16498000 12826000 23891000 28728 360 26248 241431;241432;241433;241434;241435;241436;241437;241438;241439;241440;241441;241442;241443;241444;241445 191897;191898;191899;191900;191901;191902;191903;191904;191905;191906;191907;191908;191909;191910;191911;191912 191900 16 LFEDLKEDDK Unmodified 1250.603 0.60304789 2411 Q14527 HLTF Helicase-like transcription factor yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 43.73 43.912 3 0.007711 49274 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 54.198 39.518 206820000 0 0 0 0 15147000 12478000 22785000 27178000 12201000 21014000 28812000 43237000 23967000 0 0 28729 2411 26249 241446;241447;241448;241449;241450;241451;241452;241453;241454 191913;191914;191915 191913 3 LFEDMGLFEAFK Oxidation (M) 1461.685 0.68500338 2406 Q14432 PDE3A cGMP-inhibited 3',5'-cyclic phosphodiesterase A yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 90.125 90.252 2 0.0070714 104437 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.158 32.04 3638300 0 0 0 0 0 0 0 0 0 1295800 0 0 0 0 2342600 28730 2406 26250 241455;241456 191916 191916 3943 1 LFEELGK Unmodified 834.44872 0.4487195 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.47 3.59 3 2 10 2 2 1 1 1 1 1 1 1 1 1 1 1 52.923 51.189 2 0.02333 59231 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 90.986 16.268 3705800000 197490000 2794400000 270530000 17128000 0 16258000 15494000 0 9579900 19317000 67335000 57706000 25224000 58912000 156460000 28731 1337 26251 241457;241458;241459;241460;241461;241462;241463;241464;241465;241466;241467;241468;241469;241470;241471 191917;191918;191919;191920;191921;191922;191923;191924;191925;191926;191927;191928 191928 12 LFEEPEDPSNR Unmodified 1331.5994 0.59935949 1941 P63151;Q9Y2T4 PPP2R2A;PPP2R2C Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B gamma isoform yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.327 43.501 2 0.00027424 48668 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 90.906 82.966 201660000 0 0 0 9613100 10754000 14976000 9344600 7833700 9594000 12093000 21028000 35322000 12319000 15272000 43512000 28732 1941 26252 241472;241473;241474;241475;241476;241477;241478;241479;241480;241481;241482;241483 191929;191930;191931;191932;191933;191934;191935;191936;191937;191938;191939;191940 191937 12 LFEEPEDPSNRSFFSEIISSISDVK Unmodified 2871.3814 0.38143438 1941 P63151 PPP2R2A Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform yes yes 0 0 1 By MS/MS 2 0 1 1 101.39 93.258 3 5.3763E-25 120005 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.449 88.729 40452000 40452000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28733 1941 26253 241484 191941 191941 1 LFEEPEKPPPTGRPPAPPR Unmodified 2111.1164 0.11637375 276 O15357 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.459 51.606 4 4.2427E-06 58715 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 58.577 35.932 314770000 0 0 0 15558000 15555000 26534000 16557000 25112000 23721000 26103000 33479000 25993000 33294000 30467000 42395000 28734 276 26254 241485;241486;241487;241488;241489;241490;241491;241492;241493;241494;241495;241496 191942;191943;191944;191945;191946;191947;191948;191949;191950;191951;191952;191953;191954;191955;191956;191957;191958;191959;191960 191955 19 LFEESDDKEDEDADGK Unmodified 1840.7487 0.74866208 360 O43719 HTATSF1 HIV Tat-specific factor 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 3 1 1 1 1 1 1 1 1 1 1 1 28.699 27.809 2;3 1.1594E-38 36588 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 136.01 129.61 199190000 19734000 28752000 0 5913900 7784000 10099000 6702100 10098000 6552300 0 21033000 19788000 23053000 17755000 21930000 28735 360 26255 241497;241498;241499;241500;241501;241502;241503;241504;241505;241506;241507;241508;241509;241510;241511 191961;191962;191963;191964;191965;191966;191967;191968;191969;191970;191971;191972;191973;191974;191975 191968 14 LFEETGHEDPITK Unmodified 1514.7253 0.72528829 2685 Q4J6C6 PREPL Prolyl endopeptidase-like yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS 4.12 3.41 5 1 2 1 3 2 1 1 49.765 46.184 2;3 2.3877E-21 60725 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 144.55 120.46 124670000 22747000 30422000 31001000 0 0 0 0 0 0 0 0 13184000 0 0 27316000 28736 2685 26256 241512;241513;241514;241515;241516;241517;241518;241519 191976;191977;191978;191979;191980;191981 191976 5 LFEFAGYDVLR Unmodified 1328.6765 0.6764876 1733 P54136 RARS Arginine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 89.098 89.239 2 0.0003115 103637 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 116.52 73.495 16563000 0 0 0 0 0 2459200 0 0 1367000 3180400 2288800 0 0 0 7267800 28737 1733 26257 241520;241521;241522;241523;241524;241525 191982;191983;191984;191985;191986;191987;191988 191983 7 LFEGNALLR Unmodified 1031.5764 0.57637963 1511 P46781 RPS9 40S ribosomal protein S9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.718 69.795 2 0.0030679 79121 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.9 34.341 886790000 0 0 0 46726000 53659000 53748000 52187000 64847000 39606000 67932000 96029000 129340000 80918000 75571000 126220000 28738 1511 26258 241526;241527;241528;241529;241530;241531;241532;241533;241534;241535;241536;241537 191989;191990;191991;191992;191993;191994;191995;191996;191997;191998;191999;192000;192001 191992 13 LFEGNALLRR Unmodified 1187.6775 0.67749065 1511 P46781 RPS9 40S ribosomal protein S9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 58.596 58.783 3 0.0011628 66086 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.04 36.027 256640000 0 0 0 0 9686600 22840000 14199000 19183000 21557000 17191000 19981000 39848000 26256000 22547000 43355000 28739 1511 26259 241538;241539;241540;241541;241542;241543;241544;241545;241546;241547;241548 192002;192003;192004;192005;192006;192007;192008;192009;192010;192011;192012 192011 11 LFEHYYQELK Unmodified 1368.6714 0.67140222 2168 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.06 3.8 5 1 10 2 2 2 1 1 1 1 1 1 1 1 1 1 66.894 64.916 2;3 6.9144E-06 86827 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 163.16 136.78 448760000 137170000 115080000 7913800 0 0 24971000 5210000 8733200 13758000 15184000 13610000 20711000 12195000 15201000 59020000 28740 2168 26260 241549;241550;241551;241552;241553;241554;241555;241556;241557;241558;241559;241560;241561;241562;241563;241564 192013;192014;192015;192016;192017;192018;192019;192020;192021 192018 9 LFEILNDK Unmodified 990.5386 0.53859714 2769 Q5T1V6 DDX59 Probable ATP-dependent RNA helicase DDX59 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74.824 73.808 2 0.0025172 90269 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 122.13 30.222 122090000 12765000 26663000 16167000 0 1852800 10991000 5028900 4496500 4648600 6659700 5969600 7131800 5958100 6108900 7646000 28741 2769 26261 241565;241566;241567;241568;241569;241570;241571;241572;241573;241574;241575;241576;241577;241578 192022;192023;192024;192025;192026;192027;192028;192029;192030;192031;192032;192033 192030 12 LFEISDIVIK Unmodified 1175.6802 0.680176 4625 Q9NSD9 FARSB Phenylalanine--tRNA ligase beta subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.6 3.67 3 7 1 1 1 1 1 1 1 1 1 1 90.69 89.055 2 0.0014533 111626 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.87 80.705 70245000 21644000 25058000 11341000 0 0 2060500 1260000 0 1335000 2709500 0 2393400 0 2444100 0 28742 4625 26262 241579;241580;241581;241582;241583;241584;241585;241586;241587;241588 192034;192035;192036;192037;192038;192039;192040;192041 192036 8 LFELEEQDLFR Unmodified 1437.714 0.71399532 4777 Q9NZN4 EHD2 EH domain-containing protein 2 yes yes 0 0 0 By MS/MS 10 0 1 1 88.102 88.252 2 0.011088 102114 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.435 35.361 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28743 4777 26263 241589 192042 192042 1 LFELLEK Unmodified 890.51132 0.51131975 389 O60264;P28370 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.433 76.491 2 0.031655 88191 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.616 0 82226000 0 0 0 4616000 3420200 8684300 4486100 6967000 5411600 6242000 7037000 6807800 7840200 6911100 13803000 28744 389 26264 241590;241591;241592;241593;241594;241595;241596;241597;241598;241599;241600;241601 192043;192044;192045;192046;192047;192048;192049 192048 7 LFELYTK Unmodified 912.49567 0.49566969 3367 Q8N806 UBR7 Putative E3 ubiquitin-protein ligase UBR7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 6.57 3.96 3 4 1 1 1 1 1 1 1 68.449 66.088 2 0.02978 87710 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.262 62.148 151120000 89672000 20785000 26677000 0 0 0 1664100 0 1445500 0 6911000 0 0 3964700 0 28745 3367 26265 241602;241603;241604;241605;241606;241607;241608 192050;192051;192052 192051 3 LFEMAYK Oxidation (M) 916.43644 0.43644025 1399 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 1 0 By MS/MS By matching By MS/MS 2 0 3 1 1 1 43.858 38.565 2 0.030724 53140 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.359 26.895 83401000 18318000 46178000 18904000 0 0 0 0 0 0 0 0 0 0 0 0 28746 1399 26266 241609;241610;241611 192053 192053 1 LFENYIELK Unmodified 1167.6176 0.61757574 3909 Q96KP1 EXOC2 Exocyst complex component 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.069 80.128 2 0.0051942 92239 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.318 46.237 47881000 0 0 0 1251700 2454400 4904200 3451800 3184100 2923600 4755700 3292500 5276300 3508600 4028300 8849700 28747 3909 26267 241612;241613;241614;241615;241616;241617;241618;241619;241620;241621;241622;241623 192054;192055;192056;192057;192058;192059;192060;192061;192062;192063 192056 10 LFEPLVIK Unmodified 957.5899 0.58990443 1469 P42858 HTT Huntingtin yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.262 80.322 2 0.0092148 92923 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 83.614 57.505 36695000 0 0 0 1122800 1120600 4847600 1707200 2625600 2046300 3561200 3730300 3509100 1672500 3344200 7407900 28748 1469 26268 241624;241625;241626;241627;241628;241629;241630;241631;241632;241633;241634;241635 192064;192065 192064 2 LFEPSLQPPVMQQQPLEK Unmodified 2108.0976 0.09761214 3617 Q92540 SMG7 Protein SMG7 yes yes 0 0 0 By MS/MS 2 0 1 1 88.247 83.405 3 0.0011813 103717 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 47.223 37.693 12504000 0 12504000 0 0 0 0 0 0 0 0 0 0 0 0 0 28749 3617 26269 241636 192066 192066 1 LFEQDAEK Unmodified 978.46583 0.46582612 566 O75962;O60229 TRIO;KALRN Triple functional domain protein;Kalirin yes no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 25.218 25.358 2 0.015996 27406 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 67.981 24.981 26100000 0 0 0 0 2730600 3994700 3232400 2976400 0 4028400 0 0 0 4020100 5117300 28750 566 26270 241637;241638;241639;241640;241641;241642;241643 192067 192067 1 LFEQEVAQR Unmodified 1118.572 0.57202253 4254 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 yes yes 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching 10 0 7 1 1 1 1 1 1 1 41.932 41.977 2 0.0049392 46807 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 85.212 43.909 29159000 0 0 0 3531100 3712300 4181300 3411200 0 3676500 0 0 6419500 4227000 0 0 28751 4254 26271 241644;241645;241646;241647;241648;241649;241650 192068 192068 1 LFEQEVAQREAQK Unmodified 1574.8053 0.80526994 4254 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 yes yes 0 0 1 By MS/MS 2 0 1 1 44.593 40.823 3 0.036767 51379 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 26.359 18.575 9185100 0 0 9185100 0 0 0 0 0 0 0 0 0 0 0 0 28752 4254 26272 241651 192069 192069 1 LFEQILK Unmodified 889.5273 0.52730417 3214 Q8IU85;Q14012 CAMK1D;CAMK1 Calcium/calmodulin-dependent protein kinase type 1D;Calcium/calmodulin-dependent protein kinase type 1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73.59 73.111 2 0.036664 91772 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.377 28.806 189080000 0 57798000 50069000 5769700 2537600 8759900 4954400 4714900 4134500 5893800 7548100 8559300 5010700 5987400 17344000 28753 3214 26273 241652;241653;241654;241655;241656;241657;241658;241659;241660;241661;241662;241663;241664;241665 192070;192071;192072 192071 3 LFEQNVQR Unmodified 1032.5352 0.53524309 1831 P61081 UBE2M NEDD8-conjugating enzyme Ubc12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 32.094 32.199 2 0.0043449 33841 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 111.04 63.293 527220000 0 0 0 40235000 38346000 79375000 62821000 41652000 35690000 68453000 0 0 45665000 34713000 80266000 28754 1831 26274 241666;241667;241668;241669;241670;241671;241672;241673;241674;241675 192073;192074;192075;192076;192077;192078;192079;192080;192081;192082 192076 3 LFESLYTK Unmodified 999.5277 0.5276981 4822 Q9P2N5 RBM27 RNA-binding protein 27 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64.838 63.689 2 0.012186 72816 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 75.213 47.106 183420000 29274000 28400000 7488000 0 6905300 9956900 9042400 8392800 7574600 11838000 11385000 17820000 10899000 9465200 14981000 28755 4822 26275 241676;241677;241678;241679;241680;241681;241682;241683;241684;241685;241686;241687;241688;241689 192083;192084;192085;192086;192087;192088;192089;192090;192091;192092;192093;192094;192095;192096;192097 192084 15 LFETQESGDLNEELVK Unmodified 1849.8945 0.89453846 3211 Q86YT6 MIB1 E3 ubiquitin-protein ligase MIB1 yes yes 0 0 0 By MS/MS 2 0 1 1 77.955 73.179 2 9.0591E-07 91266 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.18 107.77 41855000 0 41855000 0 0 0 0 0 0 0 0 0 0 0 0 0 28756 3211 26276 241690 192098;192099 192098 2 LFEVGGSPANTR Unmodified 1246.6306 0.63060004 2151 Q08209;P16298 PPP3CA;PPP3CB Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform;Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform yes no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 2 50.851 50.896 2 0.0066448 58436 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 51.092 23.35 76917000 0 0 0 11242000 0 0 13162000 8763400 0 0 32049000 0 0 11700000 0 28757 2151 26277 241691;241692;241693;241694;241695;241696 192100;192101;192102 192102 2 LFEVIETEK Unmodified 1106.5859 0.58594126 3040;4795;1216 Q7KZI7;P27448;Q9P0L2 MARK2;MARK3;MARK1 Serine/threonine-protein kinase MARK2;MAP/microtubule affinity-regulating kinase 3;Serine/threonine-protein kinase MARK1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.405 66.489 2 0.005211 76200 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 80.165 35.771 93320000 0 0 0 7045400 5640000 7496300 6763600 6546700 5389000 9950900 9192900 10267000 7258300 5746400 12023000 28758 3040;1216;4795 26278 241697;241698;241699;241700;241701;241702;241703;241704;241705;241706;241707;241708 192103;192104;192105;192106;192107;192108;192109;192110;192111 192107 8 LFFAGEHTIR Unmodified 1189.6244 0.62439245 397 O60341 KDM1A Lysine-specific histone demethylase 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 2 2 1 1 2 2 2 2 1 2 58.891 59.117 2;3 0.0036259 67073 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 57.348 47.693 427630000 0 0 0 0 12914000 47579000 28145000 26028000 28174000 33258000 30055000 53658000 52574000 30337000 84909000 28759 397 26279 241709;241710;241711;241712;241713;241714;241715;241716;241717;241718;241719;241720;241721;241722;241723;241724;241725;241726 192112;192113;192114;192115;192116;192117;192118;192119;192120;192121;192122;192123 192113 11 LFFIQACGGEQK Unmodified 1396.6809 0.68092105 1763 P55211 CASP9 Caspase-9;Caspase-9 subunit p35;Caspase-9 subunit p10 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 80.288 74.909 2 1.3211E-14 96804 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 144.65 115.69 34652000 30680000 0 3971900 0 0 0 0 0 0 0 0 0 0 0 0 28760 1763 26280 241727;241728 192124;192125;192126 192124 3 LFFQPHQAGLSK Unmodified 1371.7299 0.72992016 4311 Q9GZZ9 UBA5 Ubiquitin-like modifier-activating enzyme 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 1 2 2 2 2 2 2 2 1 2 59.018 59.191 2;3 0.0024629 66498 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 101.65 92.252 422490000 0 0 0 19635000 14657000 50871000 30493000 39690000 22090000 40070000 43355000 39119000 0 41374000 81138000 28761 4311 26281 241729;241730;241731;241732;241733;241734;241735;241736;241737;241738;241739;241740;241741;241742;241743;241744;241745;241746;241747 192127;192128;192129;192130;192131;192132;192133;192134;192135;192136;192137;192138;192139 192132 10 LFFVDTGSK Unmodified 1012.5229 0.52294707 4776 Q9NZM5 GLTSCR2 Glioma tumor suppressor candidate region gene 2 protein yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.979 71.053 2 0.011037 82168 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 63.419 31.464 142910000 0 0 0 6626400 8084400 9968700 8176000 6468900 7085600 13947000 14316000 20961000 18093000 14062000 15117000 28762 4776 26282 241748;241749;241750;241751;241752;241753;241754;241755;241756;241757;241758;241759 192140;192141;192142;192143;192144 192144 5 LFFVGSR Unmodified 824.45447 0.45447358 2059 Q01650;Q9UM01;Q92536 SLC7A5;SLC7A7;SLC7A6 Large neutral amino acids transporter small subunit 1;Y+L amino acid transporter 1;Y+L amino acid transporter 2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 66.481 66.635 2 0.030762 76183 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 74.439 26.197 228460000 0 0 0 0 14747000 18999000 13801000 18437000 10842000 17346000 23594000 35271000 21076000 24044000 30304000 28763 2059 26283 241760;241761;241762;241763;241764;241765;241766;241767;241768;241769;241770 192145;192146;192147 192145 3 LFFVSEPQSIR Unmodified 1321.703 0.7030367 3603 Q8WZ42 TTN Titin yes yes 0 0 0 By MS/MS 10 0 1 1 86.91 87.04 2 0.011179 101111 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.796 2.7997 1770000 0 0 0 0 0 0 0 0 0 0 0 1770000 0 0 0 28764 3603 26284 241771 192148 192148 1 LFFWNSK Unmodified 940.48069 0.48068833 1126 P21399 ACO1 Cytoplasmic aconitate hydratase yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 80.101 80.272 2 0.029029 92358 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.035 24.462 12629000 0 0 0 0 0 0 0 0 0 0 0 0 0 1982200 10647000 28765 1126 26285 241772;241773 192149 192149 1 LFGAAEVQR Unmodified 989.52943 0.52942943 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 46.162 46.14 2 0.0099526 51707 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 65.246 38.862 110920000 0 0 0 20351000 0 0 31515000 0 0 0 59055000 0 0 0 0 28766 2344 26286 241774;241775;241776 192150;192151;192152 192150 3 LFGALLER Unmodified 917.53345 0.53345218 4188 Q9BVI4 NOC4L Nucleolar complex protein 4 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.45 76.558 2 0.012186 88317 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 75.213 14.425 45525000 0 0 0 0 2142700 5991400 2269600 3105600 2820600 3132300 4066200 7570100 4115200 3153500 7157800 28767 4188 26287 241777;241778;241779;241780;241781;241782;241783;241784;241785;241786;241787 192153;192154;192155;192156;192157;192158;192159 192159 7 LFGALTPLEPR Unmodified 1212.6867 0.68665836 193 O14617 AP3D1 AP-3 complex subunit delta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.474 82.535 2 1.986E-05 94662 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 129.63 72.344 219860000 0 0 0 6436000 7674300 18223000 12206000 17455000 15341000 20769000 15970000 21114000 21127000 21330000 42219000 28768 193 26288 241788;241789;241790;241791;241792;241793;241794;241795;241796;241797;241798;241799 192160;192161;192162;192163;192164;192165;192166;192167 192166 8 LFGAPEPSTIAR Unmodified 1257.6717 0.67173657 2961 Q6PKG0 LARP1 La-related protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.452 67.534 2 0.0035514 77388 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 70.399 40.006 246740000 0 0 0 12104000 17129000 18907000 20209000 13751000 11338000 21186000 28088000 32163000 16223000 20359000 35280000 28769 2961 26289 241800;241801;241802;241803;241804;241805;241806;241807;241808;241809;241810;241811 192168;192169;192170;192171;192172 192171 2 LFGATNPK Unmodified 846.45995 0.45995289 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 31.473 31.801 2 0.0043449 34186 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 111.04 53.583 5330600000 0 0 0 0 0 0 0 386800000 305630000 1100200000 1273800000 2264200000 0 0 0 28770 4226 26290 241812;241813;241814;241815;241816;241817;241818;241819 192173;192174;192175;192176;192177;192178;192179;192180;192181 192179 9 LFGEAGPASGVGSSGGGGSGSGTGGGDAALDFK Unmodified 2783.2634 0.26344451 3250 Q8IWZ3 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 77.657 77.761 3 3.9081E-38 89390 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.01 59.552 80081000 0 0 0 0 5694900 0 0 0 7890100 10985000 15359000 13575000 0 7970500 18607000 28771 3250 26291 241820;241821;241822;241823;241824;241825;241826 192182;192183;192184;192185;192186;192187;192188;192189;192190;192191;192192 192183 11 LFGETTLVK Unmodified 1006.5699 0.56989727 1636 P50748 KNTC1 Kinetochore-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65.046 63.938 2 0.0057635 79302 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 107.29 49.831 327540000 71769000 127220000 60599000 2262200 3046800 7525200 5519100 4790300 2775600 7012300 6084400 6253900 5771100 6746500 10161000 28772 1636 26292 241827;241828;241829;241830;241831;241832;241833;241834;241835;241836;241837;241838;241839;241840;241841 192193;192194;192195;192196;192197;192198 192197 6 LFGFKEDPFVFIPEDDPLFPPIEK Unmodified 2835.4411 0.44112151 2168 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 0 0 1 By MS/MS 2 0 1 1 101.97 93.844 3 1.6951E-05 120726 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.213 59.508 24904000 24904000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28773 2168 26293 241842 192199;192200 192199 2 LFGGNFAHQASVAR Unmodified 1473.7477 0.74769548 212 O14773 TPP1 Tripeptidyl-peptidase 1 yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 55.085 55.13 3 0.0026548 63726 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 46.318 27.186 20603000 0 0 0 7502800 0 0 0 0 0 3501500 0 0 0 0 9598700 28774 212 26294 241843;241844;241845 192201 192201 1 LFGLAQR Unmodified 803.46537 0.46537261 2042 Q00653 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 56.486 56.52 2 0.023593 63216 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 92.785 18.188 85605000 0 0 0 5218500 4805100 10361000 7169800 9546000 0 8911700 0 21474000 8731000 9388200 0 28775 2042 26295 241846;241847;241848;241849;241850;241851;241852;241853;241854 192202;192203;192204;192205;192206 192204 5 LFGLASAAVDR Unmodified 1118.6084 0.60840804 2005 P83436 COG7 Conserved oligomeric Golgi complex subunit 7 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 74.014 74.199 2 0.0080511 84708 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 52.49 18.237 12981000 0 0 0 0 0 0 2390700 0 0 2582500 0 0 0 2744000 5263900 28776 2005 26296 241855;241856;241857;241858 192207;192208 192208 2 LFGNILDK Unmodified 918.51747 0.51746776 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.884 72.95 2 0.0068474 83262 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.114 47.744 178380000 0 0 0 8608800 9849700 15619000 12736000 9930500 10438000 13564000 15826000 20202000 11545000 11875000 38182000 28777 1201 26297 241859;241860;241861;241862;241863;241864;241865;241866;241867;241868;241869;241870 192209;192210;192211;192212;192213;192214;192215;192216;192217;192218 192212 10 LFGNMEGDCPSDWK Oxidation (M) 1670.6705 0.6704923 762 P02786 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes yes 0 1 0 By MS/MS 10 0 1 1 62.809 62.972 2 0.013312 71720 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 50.292 43.633 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28778 762 26298 241871 192219 192219 915 1 LFGQETPEQR Unmodified 1203.5884 0.58840088 628 O95219 SNX4 Sorting nexin-4 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 38.811 39.055 2 0.0061036 43404 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 66.27 31.462 26086000 0 0 0 0 1621900 3897500 0 2099500 0 4005000 0 4890700 3239800 0 6331400 28779 628 26299 241872;241873;241874;241875;241876;241877;241878 192220;192221;192222;192223 192221 4 LFGSAANVVSAK Unmodified 1162.6346 0.63462279 712 O96006 ZBED1 Zinc finger BED domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 57.037 57.158 2 0.0056028 66018 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 63.624 46.229 204030000 0 0 0 13413000 12024000 19051000 14628000 17215000 11229000 16478000 14493000 24297000 15289000 13838000 32076000 28780 712 26300 241879;241880;241881;241882;241883;241884;241885;241886;241887;241888;241889;241890 192224;192225;192226;192227;192228;192229;192230;192231;192232;192233;192234;192235 192233 12 LFGVPGGPAENENGALK Unmodified 1668.8471 0.84713476 4194 Q9BVN2 RUSC1 RUN and SH3 domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.1 74.161 2 0.0001623 85428 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 71.555 42.082 59198000 0 0 0 2956700 3547700 3641100 5631800 6083400 2278000 4867900 6218100 9270700 3643100 5558000 5501000 28781 4194 26301 241891;241892;241893;241894;241895;241896;241897;241898;241899;241900;241901;241902 192236;192237;192238;192239;192240;192241;192242;192243;192244;192245 192240 10 LFGYEMAEFK Oxidation (M) 1249.5689 0.56891099 4962 Q9UKD2 MRTO4 mRNA turnover protein 4 homolog yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 72.621 72.38 2 0.010252 83039 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 50.04 32.944 47089000 0 0 11211000 0 3433200 4468600 5052600 0 0 4962300 5091000 4436200 4680300 3754500 0 28782 4962 26302 241903;241904;241905;241906;241907;241908;241909;241910;241911 192246;192247;192248;192249;192250 192248 6305 5 LFGYEMAEFK Unmodified 1233.574 0.57399637 4962 Q9UKD2 MRTO4 mRNA turnover protein 4 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 87.321 79.191 2 0.004396 103133 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 106.6 97.686 18190000 18190000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28783 4962 26302 241912 192251 192251 1 LFGYEPTIYYPK Unmodified 1489.7493 0.74931819 3412 Q8NCW5 APOA1BP NAD(P)H-hydrate epimerase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 6.56 3.86 3 1 5 1 2 1 1 1 1 1 1 85.047 83.051 2 1.5797E-10 103908 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.31 93.421 654460000 278460000 263440000 25668000 0 0 1981700 0 0 0 0 11017000 9084100 0 6714700 58085000 28784 3412 26303 241913;241914;241915;241916;241917;241918;241919;241920;241921 192252;192253;192254;192255;192256;192257 192252 6 LFHANEEEEPEK Unmodified 1470.6627 0.66268803 3432 Q8NEY1 NAV1 Neuron navigator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.077 27.274 3 0.005549 29237 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 48.585 42.708 107670000 0 0 0 4883300 5177200 12245000 5692800 6842600 8432500 9655400 11418000 15875000 10614000 5963300 10876000 28785 3432 26304 241922;241923;241924;241925;241926;241927;241928;241929;241930;241931;241932;241933 192258;192259;192260;192261;192262 192259 5 LFHANEEEEPEKK Unmodified 1598.7577 0.75765105 3432 Q8NEY1 NAV1 Neuron navigator 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 20.502 20.772 3 3.0706E-05 20812 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 85.554 77.51 77053000 0 0 0 0 3411500 0 4031500 0 3080600 0 14232000 31734000 0 0 20563000 28786 3432 26305 241934;241935;241936;241937;241938;241939 192263;192264;192265 192265 3 LFHSTDTK Unmodified 947.47125 0.47124585 5215 Q9Y508 RNF114 E3 ubiquitin-protein ligase RNF114 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8 3.46 3 9 1 1 1 1 1 1 1 1 1 1 1 1 12.065 11.307 2 0.019704 13998 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 108.46 74.722 317670000 209530000 18287000 75797000 1290700 889090 1414200 1517000 1134800 1252800 2255900 0 0 1635500 2670000 0 28787 5215 26306 241940;241941;241942;241943;241944;241945;241946;241947;241948;241949;241950;241951 192266;192267;192268 192267 2 LFHVSEDPSDLNEK Unmodified 1628.7682 0.76821573 1355 P35573 AGL Glycogen debranching enzyme;4-alpha-glucanotransferase;Amylo-alpha-1,6-glucosidase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.94 3.84 6 1 11 2 3 2 1 1 1 1 1 1 1 1 1 2 70.693 68.512 2;3 0.0010974 75524 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.321 55.483 1921300000 23209000 243180000 55591000 139420000 0 108350000 0 205410000 62204000 283050000 207830000 142410000 197490000 148660000 104500000 28788 1355 26307 241952;241953;241954;241955;241956;241957;241958;241959;241960;241961;241962;241963;241964;241965;241966;241967;241968;241969 192269;192270;192271;192272;192273;192274;192275 192274 6 LFIEDLAIK Unmodified 1060.6168 0.61684746 2278 Q13395 TARBP1 Probable methyltransferase TARBP1 yes yes 0 0 0 By MS/MS 2 0 1 1 87.653 85.219 2 0.024253 103089 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 71.501 43.976 10442000 0 0 10442000 0 0 0 0 0 0 0 0 0 0 0 0 28789 2278 26308 241970 192276 192276 1 LFIEYPTGSGNVYSSASGVAK Unmodified 2146.0582 0.058249746 4346 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like yes yes 0 0 0 By MS/MS By matching By MS/MS 7.33 3.77 1 2 1 1 1 81.224 79.764 2 5.1404E-18 98574 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.31 84.651 33738000 0 23207000 0 0 0 0 0 0 0 0 0 0 0 2595800 7935000 28790 4346 26309 241971;241972;241973 192277;192278 192277 2 LFIGGIPK Unmodified 843.52182 0.52182486 2 A0AV96 RBM47 RNA-binding protein 47 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.369 71.442 2 0.035132 82112 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 52.683 8.0723 212920000 0 0 0 10723000 12146000 15102000 16516000 17311000 10811000 20449000 20567000 23040000 19167000 17990000 29096000 28791 2 26310 241974;241975;241976;241977;241978;241979;241980;241981;241982;241983;241984;241985 192279;192280;192281;192282;192283;192284;192285;192286;192287;192288 192279 10 LFIGGLNTETNEK Unmodified 1434.7355 0.73545904 1395 P38159;Q96E39 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 70.687 69.426 2 3.6382E-107 79639 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 210.64 172.35 1197500000 95059000 596830000 0 29390000 31658000 45517000 41644000 32317000 34353000 40978000 43842000 59451000 32620000 34968000 78905000 28792 1395 26311 241986;241987;241988;241989;241990;241991;241992;241993;241994;241995;241996;241997;241998;241999;242000;242001 192289;192290;192291;192292;192293;192294;192295;192296;192297;192298;192299;192300;192301;192302;192303;192304;192305;192306;192307;192308;192309;192310 192304 22 LFIGGLPNYLNDDQVK Unmodified 1804.9359 0.93594977 1202 P26368 U2AF2 Splicing factor U2AF 65 kDa subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 89.241 88.491 2 2.2357E-23 103068 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 119.74 80.564 593900000 103610000 10832000 0 4633900 18027000 29835000 12906000 26630000 24401000 113340000 43895000 37827000 10427000 29112000 128420000 28793 1202 26312 242002;242003;242004;242005;242006;242007;242008;242009;242010;242011;242012;242013;242014;242015;242016 192311;192312;192313;192314;192315;192316;192317;192318;192319;192320;192321;192322;192323;192324;192325;192326;192327;192328;192329;192330 192326 20 LFIGGLSFETTDDSLREHFEK Unmodified 2440.1911 0.19105483 1679 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 yes yes 0 0 1 By MS/MS 2 0 1 1 93.497 85.366 4 0.0053143 110469 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 37.292 33.195 38884000 38884000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28794 1679 26313 242017 192331 192331 1 LFIGGLSFETTDESLR Unmodified 1783.8992 0.89922991 891 P09651;Q32P51 HNRNPA1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 yes no 0 0 0 By MS/MS 10 0 1 1 89.953 90.092 2 0.0070659 104332 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.55 40.7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28795 891 26314 242018 192332 192332 1 LFIGMISK Unmodified 907.52011 0.5201103 3677 Q92879 CELF1 CUGBP Elav-like family member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 75.772 75.93 2 0.0075386 86959 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.296 37.065 151450000 0 0 0 0 0 10193000 6414400 17244000 11474000 13074000 13122000 19671000 11809000 11834000 36613000 28796 3677 26315 242019;242020;242021;242022;242023;242024;242025;242026;242027;242028 192333;192334;192335;192336;192337;192338;192339;192340;192341 192336 9 LFIGMISK Oxidation (M) 923.51502 0.51502492 3677 Q92879 CELF1 CUGBP Elav-like family member 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 2 2 1 1 1 1 1 62.945 62.746 2 0.032641 72580 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 47.082 22.45 130580000 0 0 0 32101000 21760000 12308000 16343000 17333000 15727000 0 0 0 15009000 0 0 28797 3677 26315 242029;242030;242031;242032;242033;242034;242035;242036;242037 192342;192343;192344;192345 192345 4 LFIGNLPR Unmodified 928.54944 0.54943659 4209 Q9BWF3;Q9BQ04 RBM4;RBM4B RNA-binding protein 4;RNA-binding protein 4B yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 2 2 1 2 1 1 1 2 2 2 1 2 73.931 73.98 2 0.0052037 84911 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 107.74 29.996 412040000 0 0 0 20381000 18834000 28601000 28654000 29974000 23995000 33390000 52426000 41903000 40919000 33743000 59214000 28798 4209 26316 242038;242039;242040;242041;242042;242043;242044;242045;242046;242047;242048;242049;242050;242051;242052;242053;242054;242055;242056 192346;192347;192348;192349;192350;192351;192352;192353;192354;192355;192356;192357;192358 192347 13 LFILDEADK Unmodified 1062.5597 0.55972651 4902 Q9UHI6 DDX20 Probable ATP-dependent RNA helicase DDX20 yes yes 0 0 0 By MS/MS 10 0 1 1 74.788 75.099 2 0.014892 86015 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.859 39.128 21332000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21332000 28799 4902 26317 242057 192359 192359 1 LFILGTEGGFPLK Unmodified 1390.786 0.78603805 3825 Q96EX3 WDR34 WD repeat-containing protein 34 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 92.077 92.205 2 0.003452 106769 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.683 34.903 3004200 0 0 0 0 0 0 0 0 0 648570 0 0 0 0 2355700 28800 3825 26318 242058;242059 192360 192360 1 LFIPEAIQDR Unmodified 1200.6503 0.65027285 4627 Q9NSG2 C1orf112 Uncharacterized protein C1orf112 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 77.361 77.467 2 0.0060165 88969 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.621 24.023 61036000 0 0 0 0 4481400 6245100 3641500 5803300 3540400 8409800 4510700 5057100 4600000 4760900 9986000 28801 4627 26319 242060;242061;242062;242063;242064;242065;242066;242067;242068;242069;242070 192361;192362;192363;192364;192365;192366;192367;192368;192369;192370 192364 10 LFIPSSK Unmodified 790.45889 0.45889025 3953 Q96Q15 SMG1 Serine/threonine-protein kinase SMG1 yes yes 0 0 0 By MS/MS 2 0 1 1 61.58 53.325 2 0.029674 72360 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.407 32.41 9421400 9421400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28802 3953 26320 242071 192371 192371 1 LFIPWTNQK Unmodified 1145.6233 0.62332982 2789 Q5TA45 CPSF3L Integrator complex subunit 11 yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 81.011 81.082 2 0.012914 92985 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 60.59 26.501 20726000 0 0 0 0 2408400 0 2072800 0 4678200 0 0 4423900 3620100 3523000 0 28803 2789 26321 242072;242073;242074;242075;242076;242077 192372;192373 192372 2 LFISGLPFSCTK Unmodified 1368.7112 0.71115855 2475 Q15020 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 87.75 87.853 2 0.042265 101619 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.318 31.281 8120400 0 0 0 0 0 881800 0 0 0 0 0 1830500 938320 1236900 3233000 28804 2475 26322 242078;242079;242080;242081;242082 192374 192374 1 LFIVESNSSSSTR Unmodified 1425.71 0.70997257 1541 P48507 GCLM Glutamate--cysteine ligase regulatory subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 53.334 53.475 2 5.58E-14 60251 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 143.5 130.15 363400000 0 0 0 19409000 12388000 39315000 23722000 18574000 15051000 46882000 35802000 39021000 29841000 25089000 58304000 28805 1541 26323 242083;242084;242085;242086;242087;242088;242089;242090;242091;242092;242093;242094 192375;192376;192377;192378;192379;192380;192381;192382;192383;192384;192385;192386;192387;192388;192389 192381 15 LFKPGQEAVK Unmodified 1115.6339 0.63389451 3402 Q8NBS9 TXNDC5 Thioredoxin domain-containing protein 5 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 38.112 32.374 2 0.022509 44898 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.178 51.526 178470000 166200000 12270000 0 0 0 0 0 0 0 0 0 0 0 0 0 28806 3402 26324 242095;242096 192390 192390 1 LFKPPQPPAR Unmodified 1149.6659 0.66586334 279 O15372 EIF3H Eukaryotic translation initiation factor 3 subunit H yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 44.841 44.946 3 0.0014787 49184 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.676 78.276 158520000 0 0 0 13229000 13159000 14452000 12466000 15322000 7977900 16449000 21628000 0 14749000 0 29090000 28807 279 26325 242097;242098;242099;242100;242101;242102;242103;242104;242105;242106;242107 192391;192392;192393;192394;192395;192396;192397;192398;192399;192400;192401 192393 11 LFLAGYDPTPTMR Oxidation (M) 1496.7334 0.73335055 498 O75436 VPS26A Vacuolar protein sorting-associated protein 26A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.687 75.749 2 9.9209E-05 86819 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.17 71.594 161100000 0 0 0 7425600 6032100 8874200 8726600 8992600 7400000 9651700 16285000 21943000 10924000 11478000 43367000 28808 498 26326 242108;242109;242110;242111;242112;242113;242114;242115;242116;242117;242118;242119 192402;192403;192404;192405;192406;192407;192408;192409;192410;192411;192412;192413 192405 648 12 LFLAGYDPTPTMR Unmodified 1480.7384 0.73843593 498 O75436 VPS26A Vacuolar protein sorting-associated protein 26A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 80.745 80.803 2 0.0003348 92600 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 96.89 48.25 30029000 0 0 0 0 3686300 0 0 7591000 0 0 8679000 0 0 10073000 0 28809 498 26326 242120;242121;242122;242123 192414;192415;192416 192416 3 LFLDFLEEFQSSDGEIK Unmodified 2015.9728 0.97278878 2415 Q14566 MCM6 DNA replication licensing factor MCM6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.29 0.452 5 2 2 4 1 100.64 96.157 2;3 1.2604E-07 119368 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.22 87.215 74314000 14076000 58978000 1259000 0 0 0 0 0 0 0 0 0 0 0 0 28810 2415 26327 242124;242125;242126;242127;242128;242129;242130 192417;192418;192419;192420;192421 192418 4 LFLDGEEEK Unmodified 1078.5183 0.51825563 4607 Q9NRN7 AASDHPPT L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 49.891 50.065 2 0.0034222 56664 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 94.114 53.846 108560000 0 0 0 7999800 0 0 11663000 14123000 0 15923000 24113000 0 10301000 0 24433000 28811 4607 26328 242131;242132;242133;242134;242135;242136;242137;242138 192422;192423;192424;192425;192426;192427;192428;192429;192430;192431 192427 10 LFLDYTIK Unmodified 1011.5641 0.56408361 214 O14777 NDC80 Kinetochore protein NDC80 homolog yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80.551 79.535 2 0.0082209 91651 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 86.953 68.918 123110000 50117000 17525000 9793000 0 1752300 3791300 2769500 2603700 3798700 4379300 5743800 5876500 2273500 3758500 8931700 28812 214 26329 242139;242140;242141;242142;242143;242144;242145;242146;242147;242148;242149;242150;242151;242152 192432;192433;192434;192435;192436;192437;192438;192439;192440;192441;192442;192443;192444 192436 13 LFLELEPQVR Unmodified 1242.6972 0.69722304 2232 Q13098 GPS1 COP9 signalosome complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 83.098 83.203 2 0.0017456 96367 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 102.51 89.161 232420000 0 0 0 0 5120400 12518000 4726300 8891000 6092500 23013000 34982000 28368000 9301900 18325000 81086000 28813 2232 26330 242153;242154;242155;242156;242157;242158;242159;242160;242161;242162;242163 192445;192446;192447;192448;192449;192450;192451;192452;192453;192454;192455;192456;192457;192458 192447 14 LFLESSDANPVR Unmodified 1346.683 0.68302954 4641 Q9NU22 MDN1 Midasin yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.9 64.988 2 2.1827E-06 75357 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 113.71 76.231 145520000 0 0 0 5907900 8119800 11682000 9109400 8582100 6941500 17430000 11895000 18864000 15986000 16719000 14289000 28814 4641 26331 242164;242165;242166;242167;242168;242169;242170;242171;242172;242173;242174;242175 192459;192460;192461;192462;192463;192464;192465;192466;192467;192468;192469;192470 192470 10 LFLFGEEPSK Unmodified 1165.6019 0.60192568 3197 Q86XL3 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 80.249 80.277 2 0.013776 92890 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 51.066 32.291 15519000 0 0 0 768700 751820 1694400 1081000 1150600 0 0 0 3725700 1266300 2387100 2693200 28815 3197 26332 242176;242177;242178;242179;242180;242181;242182;242183;242184 192471;192472;192473 192471 3 LFLNETQTQEITEDIPVK Unmodified 2117.0892 0.089215523 1441 P41252 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.95 3.86 7 3 9 2 6 2 1 1 2 1 1 1 2 87.709 85.942 2;3 7.061E-47 99819 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 187.44 166.49 2874700000 76833000 2692600000 58384000 0 1696400 0 0 1795800 0 15445000 5645000 4775500 0 2544100 14909000 28816 1441 26333 242185;242186;242187;242188;242189;242190;242191;242192;242193;242194;242195;242196;242197;242198;242199;242200;242201;242202;242203 192474;192475;192476;192477;192478;192479;192480;192481;192482;192483;192484;192485;192486;192487;192488;192489;192490 192480 15 LFLPEGPCDHTVVK Unmodified 1610.8127 0.81266351 2540 Q15477 SKIV2L Helicase SKI2W yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.8 3.12 3 1 1 2 1 1 1 73.833 69.884 3 2.0187E-06 91090 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.746 72.695 305330000 176220000 44019000 73492000 0 0 0 0 0 0 0 0 0 0 0 11599000 28817 2540 26334 242204;242205;242206;242207;242208 192491;192492;192493;192494 192493 4 LFLQALK Unmodified 831.52182 0.52182486 2685 Q4J6C6 PREPL Prolyl endopeptidase-like yes yes 0 0 0 By MS/MS 10 0 1 1 75.251 75.478 2 0.033415 87087 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 71.995 7.1919 4575200 0 0 0 0 0 0 0 0 0 0 0 4575200 0 0 0 28818 2685 26335 242209 192495 192495 1 LFLQNNLIR Unmodified 1129.6608 0.66077796 3150 Q86UN3 RTN4RL2 Reticulon-4 receptor-like 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.811 77.871 2 0.003795 89950 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 100.74 57.496 82246000 0 0 0 3834500 4827400 6122000 5121300 7275800 3678100 9399600 6726800 11769000 5088900 7194200 11209000 28819 3150 26336 242210;242211;242212;242213;242214;242215;242216;242217;242218;242219;242220;242221 192496;192497;192498;192499;192500;192501;192502;192503 192502 7 LFLSFSGSDVQNK Unmodified 1440.7249 0.72489436 5253 Q9Y5X2 SNX8 Sorting nexin-8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.4 3.77 2 1 2 1 1 1 1 1 74.413 71.666 2 8.6293E-18 98864 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 129.16 100.43 44181000 28077000 1585900 1719700 0 0 5140600 0 0 0 0 0 0 0 7658400 0 28820 5253 26337 242222;242223;242224;242225;242226 192504;192505;192506;192507;192508;192509 192506 5 LFLSMDPVHGDISR Oxidation (M) 1601.7872 0.78717704 4641 Q9NU22 MDN1 Midasin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 66.773 66.837 3 0.0012639 76448 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 45.614 38.412 32439000 0 0 0 0 2655500 8299800 0 0 0 6745100 6388000 8350800 0 0 0 28821 4641 26338 242227;242228;242229;242230;242231 192510;192511;192512;192513 192513 6057 3 LFLSNMER Oxidation (M) 1024.5012 0.50116577 205 O14732 IMPA2 Inositol monophosphatase 2 yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 43.081 43.83 2 0.015101 48577 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.76 33.798 20456000 0 0 0 0 0 0 0 0 0 0 0 9898500 0 0 10557000 28822 205 26339 242232;242233 192514;192515 192515 273 2 LFLSNMER Unmodified 1008.5063 0.50625115 205 O14732 IMPA2 Inositol monophosphatase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 62.301 62.323 2 0.013529 72251 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 72.138 14.675 31289000 0 0 0 13533000 0 0 0 3067300 0 0 0 0 0 0 14688000 28823 205 26339 242234;242235;242236 192516;192517;192518;192519 192519 4 LFLTPEDLDDPVNRAK Unmodified 1841.9523 0.95232811 4332 Q9H0K6 PUS7L Pseudouridylate synthase 7 homolog-like protein yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 84.046 78.75 3 0.0054446 101102 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 38.889 30.096 14590000 9220100 0 5370100 0 0 0 0 0 0 0 0 0 0 0 0 28824 4332 26340 242237;242238 192520;192521 192520 2 LFLVQLQEK Unmodified 1116.6543 0.6542956 369 O43809 NUDT21 Cleavage and polyadenylation specificity factor subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 79.898 79.124 2 0.00085161 91522 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 143.89 89.919 2859500000 298080000 33478000 52575000 88174000 119000000 157420000 176060000 189490000 243420000 251900000 236240000 284670000 178770000 186030000 364120000 28825 369 26341 242239;242240;242241;242242;242243;242244;242245;242246;242247;242248;242249;242250;242251;242252;242253;242254;242255 192522;192523;192524;192525;192526;192527;192528;192529;192530;192531;192532;192533;192534;192535;192536;192537 192537 16 LFLYDIAEGK Unmodified 1167.6176 0.61757574 2809 Q5VT25 CDC42BPA Serine/threonine-protein kinase MRCK alpha yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 86.811 81.53 2 0.019167 104438 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.305 30.481 9712200 5705600 0 4006600 0 0 0 0 0 0 0 0 0 0 0 0 28826 2809 26342 242256;242257 192538;192539;192540 192538 3 LFLYDLPEGK Unmodified 1193.6332 0.6332258 5247 Q9Y5S2 CDC42BPB Serine/threonine-protein kinase MRCK beta yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 85.366 80.079 2 0.004113 98575 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 99.442 60.65 20911000 9383500 0 11528000 0 0 0 0 0 0 0 0 0 0 0 0 28827 5247 26343 242258;242259 192541;192542 192542 1 LFMAQALQEYNN Oxidation (M) 1456.6657 0.66566492 279 O15372 EIF3H Eukaryotic translation initiation factor 3 subunit H yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 73.126 71.588 2 0.0023306 89220 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.168 73.833 149320000 85183000 0 0 0 0 12314000 0 0 0 16285000 22076000 0 13467000 0 0 28828 279 26344 242260;242261;242262;242263;242264;242265 192543;192544;192545;192546;192547;192548 192546 369 3 LFMAQALQEYNN Unmodified 1440.6708 0.6707503 279 O15372 EIF3H Eukaryotic translation initiation factor 3 subunit H yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.65 3.66 1 3 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 85.324 84.585 2 5.252E-07 99623 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 117.04 105.88 1089700000 390550000 544570000 17614000 2365700 4908200 7596000 4444400 9192800 6955400 15989000 19547000 12340000 8510400 13913000 31166000 28829 279 26344 242266;242267;242268;242269;242270;242271;242272;242273;242274;242275;242276;242277;242278;242279;242280;242281;242282 192549;192550;192551;192552;192553;192554;192555;192556;192557;192558;192559;192560;192561 192557 10 LFMEMNQK Oxidation (M) 1055.478 0.47798749 2442;2275 Q14738;Q13362 PPP2R5D;PPP2R5C Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform;Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 3 6 1 1 1 1 1 1 1 1 1 37.04 35.342 2 0.004542 37866 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.906 68.887 208230000 49043000 113960000 18189000 0 0 5018600 2719500 0 0 4394500 0 7402000 0 0 7502900 28830 2442;2275 26345 242283;242284;242285;242286;242287;242288;242289;242290;242291 192562;192563;192564;192565;192566;192567;192568 192564 3709 7 LFMEMNQK Unmodified 1039.4831 0.48307287 2442;2275 Q14738;Q13362 PPP2R5D;PPP2R5C Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform;Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 53.587 52.685 2 0.0086853 58302 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.359 75.28 295970000 143960000 95830000 0 0 1980600 11408000 2000300 2708100 2167300 5953500 4608300 5727300 3401600 4208800 12014000 28831 2442;2275 26345 242292;242293;242294;242295;242296;242297;242298;242299;242300;242301;242302;242303;242304 192569;192570;192571;192572 192572 4 LFMEMNQK 2 Oxidation (M) 1071.4729 0.47290211 2442;2275 Q14738;Q13362 PPP2R5D;PPP2R5C Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform;Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform no no 0 2 0 By matching By MS/MS By MS/MS 2 0.632 1 3 1 1 3 1 26.954 20.081 2 0.02386 25096 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 77.741 65.547 78465000 121370 61080000 17263000 0 0 0 0 0 0 0 0 0 0 0 0 28832 2442;2275 26345 242305;242306;242307;242308;242309 192573;192574;192575;192576 192576 3709 2 LFMLLLEK Oxidation (M) 1021.5882 0.58818987 2608 Q16531 DDB1 DNA damage-binding protein 1 yes yes 0 1 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 84.246 84.301 2 0.0094958 96711 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 70.525 24.099 83548000 0 0 0 3647500 4093900 0 6609800 0 4818800 7198400 11258000 13384000 4606500 8784100 19147000 28833 2608 26346 242310;242311;242312;242313;242314;242315;242316;242317;242318;242319 192577;192578;192579;192580;192581 192580 4255 5 LFMLLLEK Unmodified 1005.5933 0.59327524 2608 Q16531 DDB1 DNA damage-binding protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 90.209 90.347 2 0.032702 104579 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.157 22.854 3476700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3476700 28834 2608 26346 242320 192582 192582 1 LFMSLLEDTLSK Oxidation (M) 1411.7269 0.72686819 3157 Q86UV5 USP48 Ubiquitin carboxyl-terminal hydrolase 48 yes yes 0 1 0 By MS/MS 2 0 1 1 92.653 84.522 2 0.0019664 109573 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.017 59.553 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28835 3157 26347 242321 192583 192583 4777 1 LFNEHIEALTK Unmodified 1313.698 0.69795133 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.22 3.81 8 15 2 3 3 1 1 1 2 1 2 1 1 1 1 2 1 65.099 63.127 2;3 3.0031E-16 82879 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 172.17 129.98 2294200000 533290000 231380000 101100000 34089000 68733000 104940000 80927000 113060000 92940000 119710000 131560000 198040000 129770000 161860000 192790000 28836 213 26348 242322;242323;242324;242325;242326;242327;242328;242329;242330;242331;242332;242333;242334;242335;242336;242337;242338;242339;242340;242341;242342;242343;242344 192584;192585;192586;192587;192588;192589;192590;192591;192592;192593;192594;192595;192596;192597;192598;192599;192600;192601;192602;192603;192604;192605 192588 18 LFNETAK Unmodified 821.42832 0.42831841 5183 Q9Y448 KNSTRN Small kinetochore-associated protein yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 26.106 22.473 2 0.025014 29646 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.21 31.822 102190000 0 95667000 6526500 0 0 0 0 0 0 0 0 0 0 0 0 28837 5183 26349 242345;242346 192606 192606 1 LFNEVQEK Unmodified 1005.5131 0.51311067 4319 Q9H0A0 NAT10 N-acetyltransferase 10 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 35.7 35.85 2 0.0090656 39429 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 84.097 45.261 24825000 0 0 0 0 3316700 0 0 16477000 0 0 0 5031300 0 0 0 28838 4319 26350 242347;242348;242349;242350;242351 192607;192608;192609 192609 3 LFNGTEPIVLDSLK Unmodified 1544.845 0.84500949 3990 Q96SI1 KCTD15 BTB/POZ domain-containing protein KCTD15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 86.413 86.557 2 0.0014627 100345 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 68.551 34.591 13261000 0 0 0 0 0 0 0 0 0 2821000 2679100 0 0 1930900 5829800 28839 3990 26351 242352;242353;242354;242355 192610;192611;192612 192610 3 LFNHANQEVQR Unmodified 1354.6742 0.67419619 5182 Q9Y446 PKP3 Plakophilin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 1 2 2 1 2 2 1 2 1 2 24.312 24.583 2;3 1.913E-05 26012 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 92.112 65.143 219870000 0 0 0 18259000 0 18398000 16152000 27338000 11501000 26362000 20464000 16300000 25495000 13749000 25853000 28840 5182 26352 242356;242357;242358;242359;242360;242361;242362;242363;242364;242365;242366;242367;242368;242369;242370;242371;242372 192613;192614;192615;192616;192617;192618;192619;192620;192621;192622;192623;192624;192625;192626;192627 192621 15 LFNPNDDGK Unmodified 1018.472 0.47197413 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 28.37 28.618 2 0.0031256 30870 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 91.069 68.577 2094900000 0 0 0 3616200 0 11492000 85992000 132750000 147510000 429040000 575020000 693360000 4355700 3044100 8750500 28841 4226 26353 242373;242374;242375;242376;242377;242378;242379;242380;242381;242382;242383 192628;192629;192630;192631;192632;192633;192634;192635;192636;192637;192638 192633 11 LFNQINIS Unmodified 947.50763 0.50763136 3684 Q92905 COPS5 COP9 signalosome complex subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.52 76.578 2 0.025986 88371 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 58.246 23.422 123270000 0 0 0 4339000 5102600 8603800 8170800 7632200 5979000 11159000 15847000 12152000 9704300 10968000 23610000 28842 3684 26354 242384;242385;242386;242387;242388;242389;242390;242391;242392;242393;242394;242395 192639;192640;192641;192642;192643;192644 192641 6 LFNSLLLGPTASNNK Unmodified 1587.8621 0.86205654 3061 Q7LBC6 KDM3B Lysine-specific demethylase 3B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.68 1.57 1 24 1 2 2 2 2 2 2 2 2 2 2 2 2 82.855 82.918 2;3 3.0221E-27 95749 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 161.48 71.593 630550000 0 0 0 19259000 31324000 46788000 35863000 45632000 35404000 43692000 46250000 62000000 60697000 70164000 133480000 28843 3061 26355 242396;242397;242398;242399;242400;242401;242402;242403;242404;242405;242406;242407;242408;242409;242410;242411;242412;242413;242414;242415;242416;242417;242418;242419;242420 192645;192646;192647;192648;192649;192650;192651;192652;192653;192654;192655;192656;192657;192658;192659;192660;192661;192662;192663;192664 192648 14 LFNSVLR Unmodified 847.49159 0.49158736 4769 Q9NZJ0 DTL Denticleless protein homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 38.813 39.214 2 0.039014 42816 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 69.234 5.6708 59813000 0 0 0 0 0 0 4943100 0 0 7577000 7110400 8617800 14182000 9216100 8167100 28844 4769 26356 242421;242422;242423;242424;242425;242426;242427 192665 192665 1 LFNTAVCESK Unmodified 1167.5594 0.55940893 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 42.209 42.299 2 0.00020032 46382 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 141.48 80.692 878950000 0 0 0 4259400 2453300 0 42896000 75680000 48583000 164410000 241730000 298940000 0 0 0 28845 4226 26357 242428;242429;242430;242431;242432;242433;242434;242435 192666;192667;192668;192669;192670;192671;192672 192672 7 LFPADTSPSTATK Unmodified 1334.6718 0.67179615 2912 Q6NZY4 ZCCHC8 Zinc finger CCHC domain-containing protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 47.302 46.24 2 0.0047677 57951 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.726 43.957 109670000 0 59015000 0 4517700 3969700 7611400 4277900 4298300 0 8965000 8920200 0 0 8092900 0 28846 2912 26358 242436;242437;242438;242439;242440;242441;242442;242443;242444;242445 192673;192674;192675;192676;192677;192678 192674 6 LFPAVPLPDIR Unmodified 1236.723 0.72304386 5199 Q9Y4F3 KIAA0430 Meiosis arrest female protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 90.346 90.444 2 0.018629 105224 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 43.442 23.665 16657000 0 0 0 0 1070600 1634700 1204100 1481200 925240 2267000 0 2776800 995880 1602300 2699100 28847 5199 26359 242446;242447;242448;242449;242450;242451;242452;242453;242454;242455 192679;192680;192681 192681 3 LFPDTPLALDANK Unmodified 1413.7504 0.75038083 2207 Q12906 ILF3 Interleukin enhancer-binding factor 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 7.76 3.47 3 2 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 82.754 81.688 2;3 6.3416E-05 94672 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 87.568 66.868 2057800000 698370 1481400000 43164000 29234000 23234000 49235000 25990000 25380000 27269000 57890000 42014000 54026000 40583000 56641000 101010000 28848 2207 26360 242456;242457;242458;242459;242460;242461;242462;242463;242464;242465;242466;242467;242468;242469;242470;242471;242472 192682;192683;192684;192685;192686;192687;192688;192689;192690;192691;192692;192693;192694;192695;192696;192697;192698 192698 13 LFPDTPLALDANKK Unmodified 1541.8453 0.84534384 2207 Q12906 ILF3 Interleukin enhancer-binding factor 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 76.901 75.356 3 3.9916E-08 87112 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 86.944 78.147 335270000 19252000 71977000 29391000 13676000 9837900 9607100 15093000 13499000 7324900 21959000 18285000 29101000 16513000 18490000 41266000 28849 2207 26361 242473;242474;242475;242476;242477;242478;242479;242480;242481;242482;242483;242484;242485;242486;242487;242488;242489 192699;192700;192701;192702;192703;192704;192705;192706;192707;192708;192709;192710;192711;192712;192713;192714 192713 15 LFPDVLFPADSEHNK Unmodified 1727.8519 0.85188578 1489 P45983 MAPK8 Mitogen-activated protein kinase 8 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 89.166 85.5 3 0.016609 106871 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 21.254 10.899 11582000 0 10137000 1445900 0 0 0 0 0 0 0 0 0 0 0 0 28850 1489 26362 242490;242491 192715;192716 192715 2 LFPEPLLPK Unmodified 1052.627 0.62701821 3065 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.95 82.012 2 0.010025 94441 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.038 59.277 79305000 0 0 0 4928900 4433200 6688000 5072100 4300200 4559100 8806600 7586100 9201500 4949400 5881500 12898000 28851 3065 26363 242492;242493;242494;242495;242496;242497;242498;242499;242500;242501;242502;242503 192717;192718 192717 2 LFPGFEIETVK Unmodified 1278.686 0.68598966 864 P08243 ASNS Asparagine synthetase [glutamine-hydrolyzing] yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.8 3.12 3 1 1 1 2 1 1 88.706 85.007 2 0.0012634 98277 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.087 32.955 1011700000 122610000 682310000 143590000 0 0 0 0 0 0 0 0 0 0 0 63163000 28852 864 26364 242504;242505;242506;242507;242508 192719;192720;192721;192722;192723;192724 192721 5 LFPGLAIK Unmodified 857.53747 0.53747492 4043 Q99661 KIF2C Kinesin-like protein KIF2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.484 77.542 2 0.034341 88549 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 53.163 21.86 383120000 0 0 0 20718000 20736000 25506000 28734000 26093000 23939000 39183000 41915000 42402000 27885000 28758000 57253000 28853 4043 26365 242509;242510;242511;242512;242513;242514;242515;242516;242517;242518;242519;242520 192725;192726;192727;192728 192728 4 LFPGSPAIYK Unmodified 1091.6015 0.60153174 1601;32 P49792;P0DJD0;P0DJD1;A6NKT7;Q7Z3J3 RANBP2;RGPD1;RGPD2;RGPD3;RGPD4 E3 SUMO-protein ligase RanBP2;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RanBP2-like and GRIP domain-containing protein 3;RanBP2-like and GRIP domain-containing protein 4 no no 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 71.335 67.704 2 0.011214 88932 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.248 51.948 84885000 49353000 0 6208300 0 0 0 0 0 0 0 0 0 0 0 29324000 28854 1601;32 26366 242521;242522;242523 192729;192730 192730 1 LFPLIQTMHSNLAGK Oxidation (M) 1684.8971 0.89706184 2268 Q13310 PABPC4 Polyadenylate-binding protein 4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 74.057 74.145 3 0.002024 84780 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.242 29.186 41911000 0 0 0 4168900 0 0 2925900 5023700 0 5793900 5643300 0 3938000 2772400 11644000 28855 2268 26367 242524;242525;242526;242527;242528;242529;242530;242531 192731 192731 3700 1 LFPLNQQDVPDK Unmodified 1412.73 0.72997974 2395 Q14232 EIF2B1 Translation initiation factor eIF-2B subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 62.935 62.48 2;3 2.3682E-05 80044 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 91.658 73.347 205290000 0 29955000 11278000 0 6728700 23782000 13676000 7943300 7508300 16917000 15284000 19229000 10696000 13410000 28888000 28856 2395 26368 242532;242533;242534;242535;242536;242537;242538;242539;242540;242541;242542;242543;242544 192732;192733;192734;192735;192736;192737 192732 4 LFPNSLDQTDMHGDSEYNIMFGPDICGPGTK Oxidation (M) 3471.5057 0.50574174 1225 P27797 CALR Calreticulin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 5 3 1 1 90.737 84.39 3;4 8.9109E-16 109717 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.43 66.808 134730000 82291000 34086000 18352000 0 0 0 0 0 0 0 0 0 0 0 0 28857 1225 26369 242545;242546;242547;242548;242549 192738;192739;192740;192741;192742;192743 192741 1799;1800 6 LFPNSLDQTDMHGDSEYNIMFGPDICGPGTK Unmodified 3455.5108 0.51082712 1225 P27797 CALR Calreticulin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 3 1 93.751 89.041 3 1.0868E-12 113406 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 61.112 59.284 140470000 32438000 98227000 9800200 0 0 0 0 0 0 0 0 0 0 0 0 28858 1225 26369 242550;242551;242552;242553;242554 192744;192745;192746;192747;192748;192749;192750;192751;192752;192753 192748 10 LFPNSLDQTDMHGDSEYNIMFGPDICGPGTK 2 Oxidation (M) 3487.5007 0.50065637 1225 P27797 CALR Calreticulin yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 4.83 3.67 3 1 2 1 1 2 1 1 86.497 83.858 3;4 1.0972E-20 102059 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 77.065 75.116 120560000 49795000 13635000 43953000 0 0 0 0 0 0 0 3137800 0 0 0 10042000 28859 1225 26369 242555;242556;242557;242558;242559;242560 192754;192755;192756;192757;192758;192759;192760;192761 192759 1799;1800 8 LFPPDDSPLPVSSR Unmodified 1525.7777 0.77765821 2115 Q05519 SRSF11 Serine/arginine-rich splicing factor 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.593 76.651 2 0.0026755 87889 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 63.408 46.383 422500000 0 0 0 20383000 24426000 27110000 31650000 31216000 30078000 40000000 41760000 53868000 40599000 35661000 45743000 28860 2115 26370 242561;242562;242563;242564;242565;242566;242567;242568;242569;242570;242571;242572 192762;192763;192764;192765;192766;192767;192768;192769;192770;192771;192772 192766 9 LFPQETLFLEAK Unmodified 1434.7759 0.7758673 5037 Q9UNN5 FAF1 FAS-associated factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 3 9 1 1 1 1 1 1 1 1 1 1 1 1 88.149 86.958 2 3.9649E-07 109885 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 140.16 108.74 173620000 14866000 104210000 13807000 0 0 7755900 2706600 0 3807600 6463200 3438600 4350400 1691400 2473200 8055200 28861 5037 26371 242573;242574;242575;242576;242577;242578;242579;242580;242581;242582;242583;242584 192773;192774;192775;192776;192777;192778;192779;192780;192781;192782;192783;192784 192781 12 LFPQETLFLEAKE Unmodified 1563.8185 0.81846039 5037 Q9UNN5 FAF1 FAS-associated factor 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 91.63 86.463 2 0.0049526 108976 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.618 79.24 120570000 17676000 96688000 6207600 0 0 0 0 0 0 0 0 0 0 0 0 28862 5037 26372 242585;242586;242587 192785;192786;192787 192785 1 LFPVECPK Unmodified 988.50519 0.50518852 3762 Q96BP3 PPWD1 Peptidylprolyl isomerase domain and WD repeat-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 58.528 53.693 2 0.04418 68852 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.915 55.336 119410000 0 116520000 2887200 0 0 0 0 0 0 0 0 0 0 0 0 28863 3762 26373 242588;242589 192788 192788 1 LFPYALAFMPPGYEEDMK Oxidation (M) 2133.9791 0.97913649 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 96.17 96.323 2 0.0010829 112072 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 46.592 40.559 11913000 0 0 0 0 0 0 0 0 0 6021400 5891300 0 0 0 0 28864 4226 26374 242590;242591 192789;192790 192790 5700;5701 2 LFPYALAFMPPGYEEDMK 2 Oxidation (M) 2149.9741 0.97405111 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 2 1 1 2 1 1 92.104 92.252 2;3 1.0598E-38 107210 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 133.15 120.38 348130000 0 0 0 0 0 1335100 8542900 19973000 0 95747000 158450000 61054000 0 0 3026300 28865 4226 26374 242592;242593;242594;242595;242596;242597;242598;242599;242600 192791;192792;192793;192794 192791 5700;5701 3 LFQCAVCNK Unmodified 1138.5263 0.52633467 2594 Q15911;Q86UP3 ZFHX3;ZFHX4 Zinc finger homeobox protein 3;Zinc finger homeobox protein 4 yes no 0 0 0 By MS/MS 2 0 1 1 43.156 36.362 2 0.028492 50121 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.469 14.665 10008000 10008000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28866 2594 26375 242601 192795 192795 1 LFQECCPHSTDR Unmodified 1548.6449 0.64494625 1868 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 27.431 27.855 3 0.0041344 29486 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 41.401 34.271 21083000 0 0 0 0 0 2346400 0 0 0 0 0 8722300 0 5323100 4691600 28867 1868 26376 242602;242603;242604;242605 192796;192797;192798 192798 3 LFQFLQAEPHNSLGK Unmodified 1727.8995 0.89950468 2927 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching 10 0 6 1 1 1 1 1 1 78.254 78.398 3 0.0080525 90533 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 47.622 43.379 27036000 0 0 0 0 0 5399200 0 5437500 4538400 0 3021900 3215800 0 5422900 0 28868 2927 26377 242606;242607;242608;242609;242610;242611 192799 192799 0 LFQKPANFEQR Unmodified 1376.7201 0.72008375 952 P11532 DMD Dystrophin yes yes 0 0 1 By MS/MS 10 0 1 1 32.79 33.125 3 0.047051 36296 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 32.008 0 7353200 0 0 0 0 0 0 0 0 0 0 0 0 7353200 0 0 28869 952 26378 242612 192800 192800 1 LFQLGPPSPVK Unmodified 1181.6808 0.6808447 709 O95997;Q9NZH5 PTTG1;PTTG2 Securin;Securin-2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77.001 76.286 2 3.0126E-05 88134 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 118.18 63.628 240940000 11407000 0 2147300 9898600 11827000 11985000 17762000 13082000 16111000 22635000 29424000 21827000 15525000 18060000 39252000 28870 709 26379 242613;242614;242615;242616;242617;242618;242619;242620;242621;242622;242623;242624;242625;242626 192801;192802;192803;192804;192805;192806;192807;192808;192809;192810;192811;192812;192813;192814;192815;192816 192802 16 LFQLQTLGLK Unmodified 1159.6965 0.69649476 3919 Q96LI5;Q9ULM6 CNOT6L;CNOT6 CCR4-NOT transcription complex subunit 6-like;CCR4-NOT transcription complex subunit 6 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 84.741 84.86 2 0.012563 98639 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 52.255 10.753 14370000 0 0 0 0 0 3066100 0 3143800 0 0 0 0 1650000 1381400 5128700 28871 3919 26380 242627;242628;242629;242630;242631 192817;192818;192819;192820 192820 4 LFQLTEK Unmodified 877.49092 0.49091866 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 59.688 53.705 2 0.020877 69179 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 111.28 28.049 298550000 139030000 110530000 48987000 0 0 0 0 0 0 0 0 0 0 0 0 28872 2775 26381 242632;242633;242634 192821;192822;192823 192821 3 LFQPFGK Unmodified 835.45922 0.4592246 2456 Q14966 ZNF638 Zinc finger protein 638 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 62.754 62.56 2 0.04788 71433 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 65.263 33.149 15753000 0 0 0 0 6760900 0 8992500 0 0 0 0 0 0 0 0 28873 2456 26382 242635;242636 192824 192824 1 LFQPVQYGQKPEGR Unmodified 1645.8576 0.85763986 3915 Q96L91 EP400 E1A-binding protein p400 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 49.794 49.897 3 0.00060868 55144 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.68 55.951 190110000 0 0 0 12291000 11841000 22867000 15606000 15890000 13884000 19206000 20018000 0 17403000 20304000 20803000 28874 3915 26383 242637;242638;242639;242640;242641;242642;242643;242644;242645;242646;242647 192825;192826;192827;192828;192829;192830;192831;192832;192833;192834;192835;192836 192828 12 LFQQIYSDGSDEVK Unmodified 1627.773 0.77296676 5131 Q9Y2Z0 SUGT1 Suppressor of G2 allele of SKP1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.8 3.92 2 3 1 1 1 1 1 67.984 66.182 2 0.00050092 83906 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.47 87.427 85131000 268010 16731000 0 0 0 0 0 0 0 0 68132000 0 0 0 0 28875 5131 26384 242648;242649;242650;242651;242652 192837;192838;192839;192840 192837 4 LFQSDTNAMLGK Unmodified 1323.6493 0.64928657 673 O95619 YEATS4 YEATS domain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 60.005 59.608 2 2.6339E-05 66996 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 115.71 71.907 204210000 0 81335000 0 7124700 9616000 9679300 7063300 8335900 0 11132000 11892000 11455000 10401000 10949000 25229000 28876 673 26385 242653;242654;242655;242656;242657;242658;242659;242660;242661;242662;242663;242664 192841;192842;192843;192844;192845;192846;192847;192848;192849;192850;192851;192852 192845 12 LFQSDTNAMLGK Oxidation (M) 1339.6442 0.6442012 673 O95619 YEATS4 YEATS domain-containing protein 4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 2 1 1 1 1 44.503 44.66 2 3.5868E-05 49992 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 90.15 72.92 46452000 0 0 0 0 0 9722400 8476900 6756900 0 14518000 0 0 6978400 0 0 28877 673 26385 242665;242666;242667;242668;242669;242670;242671;242672;242673;242674;242675 192853;192854;192855;192856;192857;192858;192859;192860;192861 192857 815 9 LFQSNDPTLR Unmodified 1189.6091 0.60913632 5267 Q9Y678 COPG1 Coatomer subunit gamma-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 48.192 48.421 2 0.0019472 53562 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 87.476 31.465 19930000 0 0 0 0 0 0 0 0 0 0 0 0 0 19930000 0 28878 5267 26386 242676;242677;242678;242679;242680;242681 192862;192863;192864;192865;192866;192867 192866 6 LFQSNDPTLRR Unmodified 1345.7102 0.71024735 5267 Q9Y678 COPG1 Coatomer subunit gamma-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.723 38.902 3 0.00010116 43180 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 81.865 25.302 347540000 0 0 0 19299000 13968000 33328000 20796000 26105000 14891000 33645000 29596000 45016000 35187000 27552000 48155000 28879 5267 26387 242682;242683;242684;242685;242686;242687;242688;242689;242690;242691;242692;242693 192868;192869;192870;192871;192872;192873;192874;192875;192876;192877;192878;192879 192874 8 LFQSNDQTLRR Unmodified 1376.7161 0.71606101 4839 Q9UBF2 COPG2 Coatomer subunit gamma-2 yes yes 0 0 1 By MS/MS 10 0 1 1 32.866 33.178 3 0.0092636 35203 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 30.889 0 5049400 0 0 0 0 0 0 0 0 0 0 0 0 0 5049400 0 28880 4839 26388 242694 192880 192880 1 LFQSNLVPADPE Unmodified 1328.6612 0.66123147 191 O14593 RFXANK DNA-binding protein RFXANK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.612 78.67 2 0.0016138 91112 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 66.435 57.476 282680000 0 0 0 14887000 23445000 25584000 27345000 20979000 20430000 25860000 27655000 25978000 20519000 18052000 31950000 28881 191 26389 242695;242696;242697;242698;242699;242700;242701;242702;242703;242704;242705;242706 192881;192882;192883;192884;192885;192886;192887;192888;192889;192890;192891 192888 11 LFQTAFPAPYGPSPASR Unmodified 1805.9101 0.91006937 5287 Q9Y6J9 TAF6L TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 81.207 81.255 2 2.3923E-06 93870 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 79.492 49.287 31798000 0 0 0 2377300 0 4618100 3275300 5772600 4216900 0 0 11537000 0 0 0 28882 5287 26390 242707;242708;242709;242710;242711;242712;242713 192892;192893;192894;192895;192896 192893 5 LFQVEYAIEAIK Unmodified 1422.7759 0.7758673 1228 P28066 PSMA5 Proteasome subunit alpha type-5 yes yes 0 0 0 By MS/MS 10 0 1 1 89.225 89.368 2 0.00057105 103427 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.111 69.682 3101800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3101800 28883 1228 26391 242714 192897 192897 1 LFQYASTDMDK Oxidation (M) 1333.586 0.58601761 2450;2069 Q02078;Q06413;Q14814 MEF2A;MEF2C;MEF2D Myocyte-specific enhancer factor 2A;Myocyte-specific enhancer factor 2C;Myocyte-specific enhancer factor 2D no no 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 44.234 43.606 2 8.5337E-05 55406 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.71 102.48 189080000 0 59039000 4401700 8688500 6293700 9269500 8620600 9802800 11597000 17036000 16605000 0 15127000 9040800 13560000 28884 2069;2450 26392 242715;242716;242717;242718;242719;242720;242721;242722;242723;242724;242725;242726;242727 192898;192899;192900;192901;192902;192903;192904;192905;192906;192907;192908 192901 3361 11 LFQYASTDMDK Unmodified 1317.5911 0.59110299 2450;2069 Q02078;Q06413;Q14814 MEF2A;MEF2C;MEF2D Myocyte-specific enhancer factor 2A;Myocyte-specific enhancer factor 2C;Myocyte-specific enhancer factor 2D no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 55.864 55.533 2 0.0057248 62125 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.48 95.488 180520000 0 11331000 0 6354700 7163100 10730000 9703400 12728000 8745600 12573000 18431000 24094000 12138000 14684000 31838000 28885 2069;2450 26392 242728;242729;242730;242731;242732;242733;242734;242735;242736;242737;242738;242739;242740 192909;192910;192911;192912;192913;192914;192915 192911 6 LFRFASENDLPEWK Unmodified 1750.8679 0.8678702 1480 P43487 RANBP1 Ran-specific GTPase-activating protein yes yes 0 0 1 By MS/MS 2 0 1 1 88.144 80.014 3 0.028 104185 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 35.809 30.905 4615000 4615000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28886 1480 26393 242741 192916 192916 1 LFRFDVESK Unmodified 1139.5975 0.597509 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 1 By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 60.57 60.704 3 0.02897 68150 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.77 17.097 26198000 0 0 0 1177500 0 2033300 2227800 1948400 2382200 1662000 0 6233500 0 2474500 6058800 28887 1601 26394 242742;242743;242744;242745;242746;242747;242748;242749;242750 192917 192917 1 LFRNPVTNDR Unmodified 1230.6469 0.64691881 5292 Q9Y6Q9 NCOA3 Nuclear receptor coactivator 3 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 38.013 38.158 3 0.017582 40868 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.514 23.161 54330000 0 0 0 5302000 5420700 6070900 0 6052700 0 0 0 11891000 0 9416800 10176000 28888 5292 26395 242751;242752;242753;242754;242755;242756;242757 192918;192919 192918 2 LFRPPSPAPAAPGAR Unmodified 1503.831 0.83103118 3144 Q86U90 YRDC YrdC domain-containing protein, mitochondrial yes yes 0 0 1 By MS/MS By matching By matching 10 0 3 1 1 1 52.579 52.408 3 0.0092987 60362 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 35.891 23.915 17298000 0 0 0 5225000 0 7409900 4663500 0 0 0 0 0 0 0 0 28889 3144 26396 242758;242759;242760 192920 192920 1 LFSADPFDLEAQAK Unmodified 1550.7617 0.76167379 2796 Q5TDH0 DDI2 Protein DDI1 homolog 2 yes yes 0 0 0 By MS/MS 10 0 1 1 84.962 85.141 2 0.006965 98346 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.728 50.162 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28890 2796 26397 242761 192921 192921 1 LFSDEAANIYER Unmodified 1426.6729 0.67285879 2222 Q12996 CSTF3 Cleavage stimulation factor subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 66.094 66.248 2 0.00050526 76001 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 78.653 47.222 74475000 0 0 0 0 2556100 10414000 5961200 4102400 3167200 6650900 8133700 10181000 6338300 7401400 9569600 28891 2222 26398 242762;242763;242764;242765;242766;242767;242768;242769;242770;242771;242772 192922;192923;192924;192925;192926;192927;192928;192929;192930 192923 9 LFSDEDDRQINTR Unmodified 1607.754 0.75396265 2801 Q5TKA1 LIN9 Protein lin-9 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 38.56 38.799 3 0.0035026 42842 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 47.189 39.952 109360000 0 0 0 5964900 0 8522100 6242600 8211900 6084400 9167300 12641000 13930000 9911400 9560200 19124000 28892 2801 26399 242773;242774;242775;242776;242777;242778;242779;242780;242781;242782;242783 192931;192932;192933;192934;192935;192936;192937;192938 192934 6 LFSDGGLSQSQDDSIVGTR Unmodified 1980.9389 0.93886289 3520 Q8TEU7 RAPGEF6 Rap guanine nucleotide exchange factor 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.979 71.053 2 1.9039E-17 82022 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 123.02 99.269 47223000 0 0 0 2481800 2449700 4365600 3043000 2319200 3281200 4823000 4765900 5907300 4777200 3626700 5382700 28893 3520 26400 242784;242785;242786;242787;242788;242789;242790;242791;242792;242793;242794;242795 192939;192940;192941;192942;192943;192944;192945;192946;192947;192948;192949 192946 11 LFSEGLFSAK Unmodified 1097.5757 0.57571092 2463 Q14C86 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.952 77.014 2 0.021799 88892 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 46.457 26.753 76966000 0 0 0 1579800 3147200 5967700 2871900 6099100 4002200 8184900 5112300 6651500 6088500 9550700 17710000 28894 2463 26401 242796;242797;242798;242799;242800;242801;242802;242803;242804;242805;242806;242807 192950;192951;192952;192953 192950 4 LFSEVENK Unmodified 964.48656 0.48656157 1006 P14735 IDE Insulin-degrading enzyme yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 34.944 34.848 2 0.0076113 37862 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 89.046 12.912 201170000 0 0 23526000 66843000 3076400 7971900 4749300 6418400 5408600 6694700 13553000 10351000 8489500 9597500 34489000 28895 1006 26402 242808;242809;242810;242811;242812;242813;242814;242815;242816;242817;242818;242819;242820 192954;192955;192956;192957;192958;192959;192960 192958 7 LFSFPAAK Unmodified 879.48544 0.48543935 2646 Q27J81 INF2 Inverted formin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.643 69.72 2 0.006875 80316 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 92.822 66.481 369420000 0 0 0 18789000 19101000 24909000 28587000 29330000 22324000 35768000 34863000 44082000 30854000 31265000 49549000 28896 2646 26403 242821;242822;242823;242824;242825;242826;242827;242828;242829;242830;242831;242832 192961;192962;192963;192964;192965;192966;192967;192968;192969;192970 192961 10 LFSFYDYASK Unmodified 1239.5812 0.58119023 2473 Q15018 FAM175B BRISC complex subunit Abro1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 80.817 79.856 2 0.0082501 101299 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 92.051 51.064 116730000 85526000 0 0 2661200 0 2430800 0 0 1555700 0 4904600 6110700 0 3152800 10391000 28897 2473 26404 242833;242834;242835;242836;242837;242838;242839;242840 192971;192972;192973;192974;192975;192976;192977 192974 7 LFSGLSVSSEGPSQR Unmodified 1549.7736 0.77363546 2529 Q15398 DLGAP5 Disks large-associated protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.859 65.933 2 4.3208E-14 75360 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 98.353 62.41 38678000 0 0 0 2203600 2420000 3031300 3729400 2979800 0 0 3382300 4509700 3020200 4575700 8826100 28898 2529 26405 242841;242842;242843;242844;242845;242846;242847;242848;242849;242850;242851;242852 192978;192979;192980;192981;192982;192983;192984;192985;192986;192987;192988 192986 11 LFSGPNAANNK Unmodified 1131.5673 0.5672715 3991 Q96SI9 STRBP Spermatid perinuclear RNA-binding protein yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 34.222 28.727 2 0.012435 37722 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.711 29.462 51507000 21711000 29796000 0 0 0 0 0 0 0 0 0 0 0 0 0 28899 3991 26406 242853;242854 192989 192989 1 LFSLELVDESGEIRATAFNEQVDK Unmodified 2709.3497 0.34974032 1221 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 94.811 88.992 3 8.9631E-109 113349 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 162.65 125.19 126450000 126450000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28900 1221 26407 242855;242856 192990;192991;192992 192992 3 LFSLSNPSLSTTNLSGPSR Unmodified 1977.0167 0.016719282 2975 Q6UUV7 CRTC3 CREB-regulated transcription coactivator 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 2 1 1 1 1 1 1 1 2 82.106 82.185 2;3 4.0187E-59 95240 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 157.75 135.03 238280000 0 0 0 3335400 12319000 15375000 12965000 17476000 14879000 28949000 23227000 24883000 14604000 12259000 58006000 28901 2975 26408 242857;242858;242859;242860;242861;242862;242863;242864;242865;242866;242867;242868;242869;242870 192993;192994;192995;192996;192997;192998;192999;193000;193001;193002;193003;193004;193005 193003 12 LFSLSNPSLSTTNLSGPSRR Unmodified 2133.1178 0.11783031 2975 Q6UUV7 CRTC3 CREB-regulated transcription coactivator 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 77.414 77.558 3 9.0639E-08 89175 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.148 39.461 36943000 0 0 0 0 0 3851400 0 5832600 5649600 5882100 0 0 0 0 15727000 28902 2975 26409 242871;242872;242873;242874;242875 193006;193007;193008;193009;193010;193011 193008 6 LFSLTLK Unmodified 820.50584 0.50584045 2988 Q6VY07 PACS1 Phosphofurin acidic cluster sorting protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.116 77.177 2 0.030787 88455 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.415 24.296 29411000 0 0 0 1184400 1932700 2975800 1723400 1648900 1742800 2764100 2522200 2540000 1869000 2501900 6005500 28903 2988 26410 242876;242877;242878;242879;242880;242881;242882;242883;242884;242885;242886;242887 193012;193013;193014 193013 3 LFSLTPAEVEQRR Unmodified 1544.8311 0.83109076 2483 Q15036 SNX17 Sorting nexin-17 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 69.702 69.903 3 0.002497 80519 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 35.737 13.691 14206000 0 0 0 0 0 3120800 0 2455500 0 0 0 0 0 3873900 4755600 28904 2483 26411 242888;242889;242890;242891 193015;193016 193015 2 LFSPNIK Unmodified 817.46979 0.46978929 3087 Q7Z3U7 MON2 Protein MON2 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 6 4 2 2 1 1 1 1 52.067 49.281 2 0.015481 61521 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 119.22 41.502 211590000 156210000 0 27579000 0 0 0 0 0 0 0 0 0 0 9391200 18408000 28905 3087 26412 242892;242893;242894;242895 193017;193018;193019;193020 193020 4 LFSPVIAR Unmodified 901.53854 0.53853756 2830 Q5VZ89 DENND4C DENN domain-containing protein 4C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.851 63.942 2 0.0051134 72579 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 134.44 59.127 291880000 0 0 0 14020000 17939000 22019000 26474000 29015000 17153000 23069000 31806000 27272000 29008000 23800000 30304000 28906 2830 26413 242896;242897;242898;242899;242900;242901;242902;242903;242904;242905;242906;242907 193021;193022;193023;193024;193025;193026;193027;193028;193029;193030;193031;193032 193030 12 LFSQDECAK Unmodified 1096.4859 0.48590964 2939 Q6P6C2 ALKBH5 RNA demethylase ALKBH5 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 25.15 25.462 2 0.02342 25790 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.066 29.385 30546000 0 0 0 0 0 3514000 2611900 0 2904900 3654900 4318000 4232400 3551800 1979400 3778600 28907 2939 26414 242908;242909;242910;242911;242912;242913;242914;242915;242916 193033;193034;193035 193034 3 LFSQDHLVIYK Unmodified 1361.7343 0.73433683 4206 Q9BW91 NUDT9 ADP-ribose pyrophosphatase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 74.363 68.753 3 0.00041835 90228 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.266 65.89 58379000 53061000 0 5318000 0 0 0 0 0 0 0 0 0 0 0 0 28908 4206 26415 242917;242918 193036 193036 1 LFSQGIGGEQAQAK Unmodified 1432.731 0.73104237 4471 Q9H9E3 COG4 Conserved oligomeric Golgi complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 49.292 44.487 2 7.3424E-45 58145 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 175.54 143.6 71265000 0 69110000 2154800 0 0 0 0 0 0 0 0 0 0 0 0 28909 4471 26416 242919;242920 193037;193038;193039;193040 193040 4 LFSSQYGK Unmodified 928.46543 0.46543219 1601;32 P49792;A6NKT7 RANBP2;RGPD3 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 3 no no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 33.092 32.646 2 0.012121 41634 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.69 66.197 128010000 0 37255000 0 10239000 7740300 11739000 9744900 8549800 7964600 11739000 11875000 0 11164000 0 0 28910 1601;32 26417 242921;242922;242923;242924;242925;242926;242927;242928;242929;242930 193041;193042;193043;193044;193045;193046;193047 193042 7 LFSSSASSNEVK Unmodified 1254.6092 0.6091959 4244 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 yes yes 0 0 0 By MS/MS 2 0 1 1 35.781 30.933 2 0.0053148 40554 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.885 43.315 9765100 0 9765100 0 0 0 0 0 0 0 0 0 0 0 0 0 28911 4244 26418 242931 193048 193048 1 LFSSSSNTTK Unmodified 1070.5244 0.52440364 391 O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 17.365 17.706 2 0.034153 17284 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 41.876 31.166 5671600 0 0 0 0 0 0 0 0 0 2176400 3495200 0 0 0 0 28912 391 26419 242932;242933 193049 193049 1 LFSSVTFETVEESK Unmodified 1601.7825 0.78246882 4491 Q9HAV4 XPO5 Exportin-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 82.667 77.54 2 5.3437E-06 98166 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.82 118.99 109240000 57298000 27742000 24204000 0 0 0 0 0 0 0 0 0 0 0 0 28913 4491 26420 242934;242935;242936 193050;193051;193052 193050 2 LFSVIFK Unmodified 852.51093 0.51092582 4666 Q9NVE7 PANK4 Pantothenate kinase 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 81.777 81.558 2 0.028147 94199 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 76.847 47.508 64078000 0 0 0 11630000 20739000 31709000 0 0 0 0 0 0 0 0 0 28914 4666 26421 242937;242938;242939 193053;193054 193053 2 LFSVPDFVGDACK Unmodified 1453.6912 0.69115139 2444 Q14764 MVP Major vault protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 86.713 85.999 2 0.002054 99827 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.434 49.269 11473000 0 0 1671000 0 0 0 0 0 0 0 0 5440000 0 0 4362500 28915 2444 26422 242940;242941;242942 193055;193056;193057 193056 3 LFSVPSVFTPAVDTK Unmodified 1606.8607 0.86065956 2659 Q2VPK5 CTU2 Cytoplasmic tRNA 2-thiolation protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 89.618 89.726 2 0.00019704 103929 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.721 59.489 29350000 0 0 0 0 1354200 2115200 1551700 1438700 1291100 4389000 3516900 3298500 1527000 2165700 6702200 28916 2659 26423 242943;242944;242945;242946;242947;242948;242949;242950;242951;242952;242953 193058;193059;193060;193061;193062;193063;193064;193065;193066;193067 193060 10 LFTAESLIGLK Unmodified 1190.6911 0.69107503 1538 P48444 ARCN1 Coatomer subunit delta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.65 3.66 1 3 1 12 3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87.259 86.497 2 3.5506E-09 110115 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 161.92 118.79 1310600000 594540000 362870000 98308000 3943500 9601500 22978000 13680000 14981000 15118000 30037000 28464000 22750000 14036000 19259000 60001000 28917 1538 26424 242954;242955;242956;242957;242958;242959;242960;242961;242962;242963;242964;242965;242966;242967;242968;242969;242970 193068;193069;193070;193071;193072;193073;193074;193075;193076;193077;193078;193079;193080;193081;193082;193083;193084;193085;193086 193075 18 LFTAGRDSIIR Unmodified 1247.6986 0.69862003 3470 Q8TAF3 WDR48 WD repeat-containing protein 48 yes yes 0 0 1 By MS/MS 10 0 1 1 56.438 56.538 3 0.037683 64212 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 26.118 5.9108 7131900 0 0 0 0 0 0 7131900 0 0 0 0 0 0 0 0 28918 3470 26425 242971 193087 193087 1 LFTDGDAALEFADFYDFRSSYPDHK Unmodified 2926.3086 0.30860379 3723 Q969S3 ZNF622 Zinc finger protein 622 yes yes 0 0 1 By MS/MS 2 0 1 1 97.201 89.07 4 0.00036415 115074 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 44.052 40.922 15679000 15679000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28919 3723 26426 242972 193088 193088 1 LFTDMIDCK Unmodified 1141.5148 0.51476693 5374 yes yes 0 0 0 By MS/MS By matching 10 0 3 2 1 15.312 15.271 2 0.045797 14865 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 43.124 11.894 + 14089000 0 0 0 0 4903300 0 0 0 0 0 0 0 0 9186100 0 28920 5374 26427 242973;242974;242975 193089 193089 1 LFTEEELAR Unmodified 1106.5608 0.56078914 5020 Q9UMX5 NENF Neudesin yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 56.575 56.737 2 0.00355 64266 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 89.698 40.601 34734000 0 0 0 0 915120 0 0 0 0 0 11229000 13971000 0 8619700 0 28921 5020 26428 242976;242977;242978;242979 193090;193091;193092 193092 3 LFTEHVAEK Unmodified 1072.5553 0.55530983 3203 Q86Y37 CACUL1 CDK2-associated and cullin domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 35.883 30.981 2 0.00090526 43554 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 143.73 39.369 79427000 65767000 0 13660000 0 0 0 0 0 0 0 0 0 0 0 0 28922 3203 26429 242980;242981 193093;193094;193095 193094 3 LFTEVEGTCTGK Unmodified 1340.6282 0.62821678 1901 P62487 POLR2G DNA-directed RNA polymerase II subunit RPB7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 48.837 45.866 2 7.2119E-18 58976 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 182.64 141.19 244950000 0 237330000 2837500 0 0 0 0 0 0 0 0 0 0 0 4782400 28923 1901 26430 242982;242983;242984 193096;193097 193096 2 LFTFHADICTLPDTEK Unmodified 1906.9135 0.91349976 65 CON__P02769 yes yes 0 0 0 By MS/MS 2 0 1 1 87.225 79.094 3 0.00062833 103105 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.077 43.915 + 8171800 8171800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28924 65 26431 242985 193098 193098 1 LFTIGGVQK Unmodified 961.55967 0.55966693 535 O75717 WDHD1 WD repeat and HMG-box DNA-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.998 61.101 2 0.0039756 69547 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 98.997 58.728 83272000 0 0 0 4682000 4827600 5273900 4986400 12311000 2772700 7748500 7916600 5906400 7821700 6681600 12343000 28925 535 26432 242986;242987;242988;242989;242990;242991;242992;242993;242994;242995;242996;242997 193099;193100;193101;193102;193103;193104;193105;193106;193107;193108;193109;193110 193100 12 LFTLAESLGGFESLAELPAIMTHASVLK Unmodified 2944.562 0.5619817 1325 P32929 CTH Cystathionine gamma-lyase yes yes 0 0 0 By MS/MS 3 0 1 1 103.52 99.896 3 0.003014 120092 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 17.158 14.905 1157900 0 1157900 0 0 0 0 0 0 0 0 0 0 0 0 0 28926 1325 26433 242998 193111;193112 193111 2 LFTLTALR Unmodified 933.56475 0.56475231 1528 P47897 QARS Glutamine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 80.087 80.177 2 0.0076415 92630 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 88.942 51.922 118630000 0 0 0 4381500 0 12630000 8422800 8021600 5896700 11961000 9261300 13818000 6929900 8593900 28714000 28927 1528 26434 242999;243000;243001;243002;243003;243004;243005;243006;243007;243008;243009 193113;193114;193115;193116;193117;193118;193119;193120;193121;193122;193123 193113 11 LFTNDCIFLK Unmodified 1269.6427 0.64274463 3223 Q8IV50 LYSMD2 LysM and putative peptidoglycan-binding domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 87.661 79.531 2 0.0032163 103526 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.948 49.866 13619000 13619000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28928 3223 26435 243010;243011 193124;193125 193124 2 LFTNFSGADLLK Unmodified 1324.7027 0.70270235 2192 Q12800 TFCP2 Alpha-globin transcription factor CP2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 85.217 85.324 2 0.0016013 98903 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 85.807 63.067 113420000 0 0 0 0 4130700 7673700 5192200 5854500 6947200 13461000 9676900 7172600 5004400 9762700 38542000 28929 2192 26436 243012;243013;243014;243015;243016;243017;243018;243019;243020;243021;243022 193126;193127;193128;193129;193130;193131;193132;193133;193134;193135;193136 193131 11 LFTPDVIR Unmodified 959.54402 0.54401687 1154 P23368 ME2 NAD-dependent malic enzyme, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 70.228 70.256 2 0.0059861 80570 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 127.84 47.55 726290000 0 0 0 39823000 62093000 51222000 74380000 77761000 77804000 83387000 108930000 149850000 1038100 0 0 28930 1154 26437 243023;243024;243025;243026;243027;243028;243029;243030;243031;243032 193137;193138;193139;193140;193141;193142;193143;193144;193145;193146;193147;193148 193142 12 LFTPYTETEINEEELTK Unmodified 2055.9888 0.98883278 1204 P26374 CHML Rab proteins geranylgeranyltransferase component A 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 80.824 79.659 2 6.5775E-147 98434 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 232.6 204.43 541550000 12111000 473010000 6124400 0 2118100 4846700 2132700 2851100 2121400 5590000 5043000 6111700 2199200 3540400 13750000 28931 1204 26438 243033;243034;243035;243036;243037;243038;243039;243040;243041;243042;243043;243044;243045;243046;243047 193149;193150;193151;193152;193153;193154;193155;193156;193157;193158;193159;193160;193161 193151 13 LFTSDSSTTK Unmodified 1085.5241 0.52406928 1273 P30260 CDC27 Cell division cycle protein 27 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 2 1 1 1 23.062 23.303 2 0.0010088 24216 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 110.76 64.741 266170000 0 0 0 15270000 14574000 15543000 15526000 11662000 11742000 21980000 29201000 36076000 30207000 27989000 36396000 28932 1273 26439 243048;243049;243050;243051;243052;243053;243054;243055;243056;243057;243058;243059;243060 193162;193163;193164;193165;193166;193167;193168;193169;193170;193171;193172;193173 193163 10 LFTSEEEHLAETVK Unmodified 1631.8043 0.80426689 4642 Q9NUA8 ZBTB40 Zinc finger and BTB domain-containing protein 40 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 71.152 66.539 3 0.0021048 85170 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.885 38.761 28887000 0 23448000 5439900 0 0 0 0 0 0 0 0 0 0 0 0 28933 4642 26440 243061;243062 193174;193175 193174 2 LFTSELGVTEHVEGDPCK Unmodified 2016.9463 0.94625646 566 O75962 TRIO Triple functional domain protein yes yes 0 0 0 By MS/MS 2 0 1 1 76.829 71.992 3 0.021084 89900 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 26.362 10.239 18805000 0 18805000 0 0 0 0 0 0 0 0 0 0 0 0 0 28934 566 26441 243063 193176 193176 1 LFTTMELMR 2 Oxidation (M) 1172.557 0.55696609 130 O00232 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 54.307 54.502 2 0.0010217 61365 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 92.439 74.531 223620000 0 0 0 29473000 0 22980000 15038000 8715200 10327000 32785000 37434000 38519000 9387100 9187700 9771800 28935 130 26442 243064;243065;243066;243067;243068;243069;243070;243071;243072;243073;243074 193177;193178;193179;193180;193181;193182;193183;193184;193185;193186 193185 175;176 8 LFTTMELMR Unmodified 1140.5671 0.56713685 130 O00232 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.896 79.955 2 0.0030483 92427 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 91.318 46.923 84108000 0 0 0 1504000 4008500 8015700 1681600 3754500 2193000 9683900 11072000 13005000 1008500 4775700 23405000 28936 130 26442 243075;243076;243077;243078;243079;243080;243081;243082;243083;243084;243085;243086 193187;193188;193189;193190;193191;193192;193193 193192 7 LFTTMELMR Oxidation (M) 1156.5621 0.56205147 130 O00232 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 0 1 0 By MS/MS 10 0 1 1 68.879 68.998 2 0.036751 79267 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 58.596 33.777 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28937 130 26442 243087 193194 193194 175;176 1 LFVADLQR Unmodified 960.53927 0.53926584 3668 Q92830 KAT2A Histone acetyltransferase KAT2A yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 62.946 63.067 2 0.011111 72213 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 77.674 40.653 95206000 0 0 0 0 11244000 10462000 8358300 7783000 4719400 12670000 10890000 24018000 0 5062600 0 28938 3668 26443 243088;243089;243090;243091;243092;243093;243094;243095;243096 193195;193196;193197;193198;193199;193200 193195 6 LFVALQGCMDK Oxidation (M) 1296.6206 0.62062898 1591 P49748 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 0 1 0 By MS/MS 10 0 1 1 63.14 63.482 2 0.036626 72573 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 48.794 32.65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28939 1591 26444 243097 193201 193201 1 LFVDTDADTR Unmodified 1151.5459 0.54586736 4277 Q9BZX2 UCK2 Uridine-cytidine kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.907 47.074 2 0.00099736 53417 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 110.87 94.096 1552400000 0 0 0 81038000 100830000 116530000 107840000 119240000 68866000 144300000 186550000 203290000 139110000 112670000 172090000 28940 4277 26445 243098;243099;243100;243101;243102;243103;243104;243105;243106;243107;243108;243109 193202;193203;193204;193205;193206;193207;193208;193209;193210;193211;193212;193213;193214;193215;193216;193217;193218;193219;193220;193221;193222;193223;193224;193225;193226 193203 25 LFVDTDSDVR Unmodified 1165.5615 0.56151742 4480 Q9HA47 UCK1 Uridine-cytidine kinase 1 yes yes 0 0 0 By MS/MS 10 0 1 1 52.491 51.961 2 0.012383 59261 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 70.919 56.916 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28941 4480 26446 243110 193227 193227 1 LFVEALGQIGPAPPLK Unmodified 1648.9552 0.95522864 1224 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 0 0 0 By MS/MS 2 0 2 2 95.278 87.147 2;3 4.7486E-45 112664 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 154.35 135.39 27333000 27333000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28942 1224 26447 243111;243112 193228;193229 193228 2 LFVETGK Unmodified 792.43815 0.43815481 5163 Q9Y3D9 MRPS23 28S ribosomal protein S23, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 34.203 34.422 2 0.03372 36845 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 71.715 30.413 43677000 0 0 0 0 5301200 0 0 0 0 9557400 0 8758200 10698000 9362500 0 28943 5163 26448 243113;243114;243115;243116;243117 193230;193231;193232 193230 3 LFVGGLDWSTTQETLR Unmodified 1821.9261 0.92611336 3818 Q96EP5 DAZAP1 DAZ-associated protein 1 yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 87.896 88.049 2 0.017302 101913 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.28 31.852 6722800 0 0 0 0 0 0 0 0 0 0 1126900 0 0 747080 4848900 28944 3818 26449 243118;243119;243120 193233 193233 1 LFVGNLPADITEDEFK Unmodified 1806.904 0.90398093 1151 P23246 SFPQ Splicing factor, proline- and glutamine-rich yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 89.298 89.369 2 8.1518E-15 103728 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 123.84 97.164 101350000 0 0 0 990820 3269100 4524400 3221600 4715300 3751800 17371000 11870000 9791500 1350100 5310900 35185000 28945 1151 26450 243121;243122;243123;243124;243125;243126;243127;243128;243129;243130;243131;243132 193234;193235;193236;193237;193238;193239;193240;193241;193242;193243;193244 193238 11 LFVGNLPPDITEEEMR Oxidation (M) 1874.9084 0.90841439 2508 Q15233 NONO Non-POU domain-containing octamer-binding protein yes yes 0 1 0 By MS/MS 10 0 1 1 81.74 81.886 2 0.031288 94934 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 40.616 20.189 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28946 2508 26451 243133 193245 193245 4121 1 LFVGNLPPDITEEEMRK Oxidation (M) 2003.0034 0.0033774035 2508 Q15233 NONO Non-POU domain-containing octamer-binding protein yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 77.178 77.329 3 2.5729E-05 89536 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 73.464 62.61 227140000 0 0 0 0 0 22639000 19671000 0 16708000 26381000 31483000 40794000 0 30321000 39142000 28947 2508 26452 243134;243135;243136;243137;243138;243139;243140;243141 193246;193247;193248;193249;193250;193251;193252;193253;193254 193247 4121 9 LFVGNLPPDITEEEMRK Unmodified 1987.0085 0.0084627814 2508 Q15233 NONO Non-POU domain-containing octamer-binding protein yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 80.085 80.145 3 0.015496 92897 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 26.146 20.487 36752000 0 0 0 0 1494600 0 0 0 2906200 0 0 0 0 5377400 26974000 28948 2508 26452 243142;243143;243144;243145 193255;193256 193256 2 LFVGNLPTDITEEDFK Unmodified 1836.9145 0.91454562 3589 Q8WXF1 PSPC1 Paraspeckle component 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 88.808 88.438 2 5.3365E-06 102375 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.312 70.99 76592000 0 27620000 0 0 0 2565300 1980100 4066600 0 9305700 5583700 4666800 1018800 4497200 15288000 28949 3589 26453 243146;243147;243148;243149;243150;243151;243152;243153;243154;243155 193257;193258;193259;193260;193261;193262;193263 193260 7 LFVGSIPK Unmodified 859.51674 0.51673948 322;407 O43390;O60506 HNRNPR;SYNCRIP Heterogeneous nuclear ribonucleoprotein R;Heterogeneous nuclear ribonucleoprotein Q no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.407 62.504 2 0.040979 72419 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 50.127 19.458 413270000 0 0 0 30143000 29915000 26975000 26644000 33036000 14388000 37015000 33432000 49255000 34181000 32203000 66088000 28950 322;407 26454 243156;243157;243158;243159;243160;243161;243162;243163;243164;243165;243166;243167 193264 193264 1 LFVLLPEQSPVSYSK Unmodified 1705.9291 0.92907347 3903 Q96K76 USP47 Ubiquitin carboxyl-terminal hydrolase 47 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 87.869 88.015 2 0.00011916 102018 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 72.006 59.429 19434000 0 0 0 0 0 2494400 1509000 1463300 1138600 2728400 2562400 2092200 0 1408400 4037500 28951 3903 26455 243168;243169;243170;243171;243172;243173;243174;243175;243176 193265;193266;193267;193268;193269;193270;193271;193272;193273 193265 9 LFVLLQTSK Unmodified 1047.6328 0.63283187 3903 Q96K76 USP47 Ubiquitin carboxyl-terminal hydrolase 47 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 78.563 78.66 2 0.040615 90244 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.349 33.128 28696000 0 0 0 0 3139200 4698500 1571800 3128700 3716500 0 0 3981900 0 2880700 5578800 28952 3903 26456 243177;243178;243179;243180;243181;243182;243183;243184 193274 193274 1 LFVLTTK Unmodified 820.50584 0.50584045 3975 Q96RS6 NUDCD1 NudC domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.508 61.61 2 0.023725 69047 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.244 18.981 205770000 0 0 0 6735200 7415300 15088000 9411700 11647000 6427800 19507000 25637000 25189000 13835000 18119000 46758000 28953 3975 26457 243185;243186;243187;243188;243189;243190;243191;243192;243193;243194;243195;243196 193275;193276;193277;193278;193279;193280;193281;193282 193277 8 LFVNAQR Unmodified 846.47119 0.47118627 2484 Q15042 RAB3GAP1 Rab3 GTPase-activating protein catalytic subunit yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 34.99 34.92 2 0.034267 38120 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 71.359 3.3261 44839000 0 0 0 7354000 5159000 0 10346000 0 0 12759000 0 0 9221200 0 0 28954 2484 26458 243197;243198;243199;243200;243201 193283;193284;193285 193283 3 LFVNAQRAAAMTPPEEELK Unmodified 2114.083 0.083024708 2484 Q15042 RAB3GAP1 Rab3 GTPase-activating protein catalytic subunit yes yes 0 0 1 By MS/MS 2 0 1 1 79.548 71.417 3 1.3248E-05 93827 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.975 60.324 8963400 8963400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28955 2484 26459 243202 193286 193286 1 LFVPEPRPVPK Unmodified 1277.7496 0.74959297 3187 Q86X10 RALGAPB Ral GTPase-activating protein subunit beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.912 59.024 3 0.0071456 66978 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 49.35 38.138 108950000 0 0 0 7024900 6670000 8360400 7807400 7874000 7522400 9281400 9581400 10027000 9860700 10607000 14333000 28956 3187 26460 243203;243204;243205;243206;243207;243208;243209;243210;243211;243212;243213;243214 193287;193288;193289;193290;193291;193292;193293;193294;193295;193296;193297 193292 10 LFVPNTQSGQR Unmodified 1245.6466 0.64658446 2066 Q01968 OCRL Inositol polyphosphate 5-phosphatase OCRL-1 yes yes 0 0 0 By MS/MS 10 0 1 1 44.412 44.462 2 0.028876 49935 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 47.198 25.734 5231700 0 0 0 0 0 5231700 0 0 0 0 0 0 0 0 0 28957 2066 26461 243215 193298 193298 1 LFVPYTEMEIENEQVEK Oxidation (M) 2112.9925 0.99253795 1172 P24386 CHM Rab proteins geranylgeranyltransferase component A 1 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 81.659 77.656 2 7.2963E-13 96513 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.15 91.551 34664000 0 34664000 0 0 0 0 0 0 0 0 0 0 0 0 0 28958 1172 26462 243216;243217 193299;193300;193301 193299 1700 3 LFVPYTEMEIENEQVEK Unmodified 2096.9976 0.99762332 1172 P24386 CHM Rab proteins geranylgeranyltransferase component A 1 yes yes 0 0 0 By MS/MS 2 0 1 1 88.775 83.933 2 0.04709 104413 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.338 37.385 63993000 0 63993000 0 0 0 0 0 0 0 0 0 0 0 0 0 28959 1172 26462 243218 193302 193302 0 LFVQDEK Unmodified 877.45453 0.45453316 4737 Q9NY33 DPP3 Dipeptidyl peptidase 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 6.9 3.81 3 1 6 1 2 1 1 1 1 1 1 1 31.948 30.303 2 0.01947 38839 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.19 36.69 937950000 26462000 843930000 12137000 0 0 0 0 2945200 0 3295600 9626800 11454000 0 7598900 20494000 28960 4737 26463 243219;243220;243221;243222;243223;243224;243225;243226;243227;243228 193303;193304;193305;193306;193307;193308 193303 6 LFVQDLATR Unmodified 1061.5869 0.58694431 1328 P33176 KIF5B Kinesin-1 heavy chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.081 67.165 2 0.0032531 76809 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 90.657 49.154 989960000 0 0 0 57260000 54405000 73943000 70448000 61482000 62962000 95199000 104020000 109780000 80859000 67190000 152410000 28961 1328 26464 243229;243230;243231;243232;243233;243234;243235;243236;243237;243238;243239;243240 193309;193310;193311;193312;193313;193314;193315;193316;193317;193318;193319;193320;193321;193322 193312 14 LFVQDLATRVK Unmodified 1288.7503 0.75032125 1328 P33176 KIF5B Kinesin-1 heavy chain yes yes 0 0 1 By MS/MS 2 0 1 1 79.455 71.325 3 0.017215 93719 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.013 28.435 8968200 8968200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28962 1328 26465 243241 193323 193323 1 LFVSDGVPGCLPVLAAAGR Unmodified 1898.0084 0.0084032019 1779 P56192 MARS Methionine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 91.71 91.838 2 0.042048 106428 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 29.341 17.475 2292300 0 0 0 0 0 0 0 0 0 684610 0 0 0 0 1607700 28963 1779 26466 243242;243243 193324 193324 1 LFVSGACDASAK Unmodified 1224.5809 0.58087266 1921 P62873 GNB1 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 40.211 40.741 2 0.002078 44800 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.103 23.835 20945000 0 0 0 0 0 0 0 0 0 0 0 7401100 4533900 4436900 4572900 28964 1921 26467 243244;243245;243246;243247 193325;193326;193327;193328 193328 4 LFVTNDAATILR Unmodified 1332.7402 0.74015049 1641 P50990 CCT8 T-complex protein 1 subunit theta yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 80.801 80.231 2 1.8695E-23 92576 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 179.8 120.01 1937300000 9987200 0 0 35476000 62859000 190760000 83823000 100370000 75073000 213720000 186910000 214780000 105030000 189370000 469110000 28965 1641 26468 243248;243249;243250;243251;243252;243253;243254;243255;243256;243257;243258;243259;243260 193329;193330;193331;193332;193333;193334;193335;193336;193337;193338 193332 4 LFVTNDAATILRELEVQHPAAK Unmodified 2435.3173 0.3172584 1641 P50990 CCT8 T-complex protein 1 subunit theta yes yes 0 0 1 By MS/MS 3 0 1 1 95.84 92.585 4 8.6122E-05 110882 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 65.521 62.979 13499000 0 13499000 0 0 0 0 0 0 0 0 0 0 0 0 0 28966 1641 26469 243261 193339 193339 1 LFVTPPEGSSR Unmodified 1188.6139 0.61388734 2398 Q14244 MAP7 Ensconsin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.984 53.127 2 0.008254 59694 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 64.654 41.225 558190000 0 0 0 37131000 35015000 43396000 47576000 33029000 40076000 59536000 60609000 64360000 55691000 30613000 51156000 28967 2398 26470 243262;243263;243264;243265;243266;243267;243268;243269;243270;243271;243272;243273 193340;193341;193342;193343;193344;193345;193346;193347;193348;193349;193350;193351;193352;193353 193344 12 LFVVDHVIK Unmodified 1068.6332 0.63316622 3157 Q86UV5 USP48 Ubiquitin carboxyl-terminal hydrolase 48 yes yes 0 0 0 By MS/MS 2 0 1 1 76.95 68.82 2 0.0094872 90650 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.181 48.39 12014000 12014000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28968 3157 26471 243274 193354 193354 1 LFVVSHDAK Unmodified 1014.5498 0.54983053 3009 Q6ZS30 NBEAL1 Neurobeachin-like protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 41.224 34.543 2 0.028967 47675 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.494 45.534 40754000 40754000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28969 3009 26472 243275 193355 193355 1 LFVYDPNNPPSSEVLR Unmodified 1845.9261 0.92611336 2503 Q15165 PON2 Serum paraoxonase/arylesterase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.201 80.259 2 8.0708E-15 92815 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 109.6 93.345 226930000 0 0 0 9940500 12497000 15619000 12552000 18692000 16218000 23980000 24049000 34496000 19467000 16659000 22758000 28970 2503 26473 243276;243277;243278;243279;243280;243281;243282;243283;243284;243285;243286;243287 193356;193357;193358;193359;193360;193361;193362;193363;193364;193365;193366;193367 193361 12 LFWVAPR Unmodified 887.50176 0.50175812 413 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.219 76.268 2 0.023833 87895 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 84.025 70.039 61325000 0 0 0 2490600 2801000 5821500 4357700 0 3781600 6855000 5208300 8272300 4373500 4821000 12542000 28971 413 26474 243288;243289;243290;243291;243292;243293;243294;243295;243296;243297;243298 193368;193369;193370;193371 193371 4 LFYGMSSEMAMK Unmodified 1393.608 0.60801538 4828 Q9P2T1 GMPR2 GMP reductase 2 yes yes 0 0 0 By MS/MS 2 0 1 1 81.743 73.612 2 0.012358 96522 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.353 47.235 8712900 8712900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28972 4828 26475 243299 193372 193372 1 LFYLALPPTVYEAVTK Unmodified 1824.0073 0.0073237944 947 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase yes yes 0 0 0 By MS/MS 10 0 1 1 97.15 97.313 2 0.0027021 112959 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.348 46.443 4056400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4056400 28973 947 26476 243300 193373 193373 1 LFYSADAVCFDVDSTVIREEGIDELAK Unmodified 3061.459 0.45903277 1972 P78330 PSPH Phosphoserine phosphatase yes yes 0 0 1 By MS/MS 2 0 2 2 97.084 88.953 3;4 2.0638E-201 114862 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 208.37 195.88 231740000 231740000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28974 1972 26477 243301;243302 193374;193375;193376 193375 3 LFYSTFATDDRK Unmodified 1462.7092 0.70924429 1267 P30084 ECHS1 Enoyl-CoA hydratase, mitochondrial yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 61.383 60.359 3 8.4944E-05 82668 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.401 86.206 229970000 196690000 0 0 2201600 0 0 2825600 0 0 0 4296800 6363200 0 3772800 13821000 28975 1267 26478 243303;243304;243305;243306;243307;243308;243309 193377;193378 193378 2 LGAAAADAVTGR Unmodified 1071.5673 0.5672715 4393 Q9H4A3 WNK1 Serine/threonine-protein kinase WNK1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.676 35.858 2 0.00075683 39387 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 74.944 52.204 777050000 0 0 0 49218000 50424000 52459000 50444000 63240000 43193000 57897000 74330000 87852000 72116000 69080000 106800000 28976 4393 26479 243310;243311;243312;243313;243314;243315;243316;243317;243318;243319;243320;243321 193379;193380;193381;193382;193383;193384;193385;193386;193387;193388;193389;193390 193387 11 LGAAAADAVTGRTEEYR Unmodified 1749.8646 0.86457574 4393 Q9H4A3 WNK1 Serine/threonine-protein kinase WNK1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 46.69 46.866 3 5.9387E-05 51665 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.257 48.391 74282000 0 0 0 4061500 3281700 4166000 0 9497200 3956800 6883900 7802200 10392000 7914600 6695400 9630600 28977 4393 26480 243322;243323;243324;243325;243326;243327;243328;243329;243330;243331;243332 193391;193392;193393;193394;193395;193396;193397;193398;193399;193400 193393 10 LGAAAADAVTGRTEEYRR Unmodified 1905.9657 0.96568676 4393 Q9H4A3 WNK1 Serine/threonine-protein kinase WNK1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 2 1 2 1 2 1 2 1 1 2 41.796 42.077 3;4 1.2694E-05 46173 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 73.208 50.109 203130000 0 0 0 7955500 0 17235000 11207000 29290000 16959000 23807000 11304000 30589000 11193000 12166000 31422000 28978 4393 26481 243333;243334;243335;243336;243337;243338;243339;243340;243341;243342;243343;243344;243345;243346;243347;243348 193401;193402;193403;193404;193405;193406;193407 193406 6 LGAAPEEESAYVAGEK Unmodified 1619.7679 0.76788138 5046 Q9UNZ2 NSFL1C NSFL1 cofactor p47 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 2 1 1 1 1 48.223 48.419 2 1.8661E-23 54669 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 120.57 108.84 196700000 0 0 0 5636400 2185000 14387000 0 9381200 0 14499000 32207000 31392000 7021900 22217000 57769000 28979 5046 26482 243349;243350;243351;243352;243353;243354;243355;243356;243357;243358;243359 193408;193409;193410;193411;193412;193413;193414;193415 193410 8 LGAASLGAEDPETQVVLINAVK Unmodified 2194.1845 0.18451289 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.2 3.27 5 2 23 1 4 2 1 2 2 2 2 2 2 2 2 2 2 2 87.17 86.512 2;3 4.238E-115 103124 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 136.84 120.72 1826300000 0 1400600000 27710000 2488700 17382000 38376000 20630000 22834000 21547000 69554000 38116000 49258000 16728000 30627000 70379000 28980 5187 26483 243360;243361;243362;243363;243364;243365;243366;243367;243368;243369;243370;243371;243372;243373;243374;243375;243376;243377;243378;243379;243380;243381;243382;243383;243384;243385;243386;243387;243388;243389 193416;193417;193418;193419;193420;193421;193422;193423;193424;193425;193426;193427;193428;193429;193430;193431;193432;193433;193434;193435;193436;193437;193438;193439;193440;193441;193442;193443;193444;193445;193446;193447;193448;193449;193450 193431 30 LGAASLGSDDPETQVVLINAIK Unmodified 2210.1794 0.17942751 5201 Q9Y4G6 TLN2 Talin-2 yes yes 0 0 0 By MS/MS By matching 2.33 0.471 2 1 2 1 91.882 88.347 3 4.1756E-26 109802 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.849 74.443 31509000 0 30774000 735080 0 0 0 0 0 0 0 0 0 0 0 0 28981 5201 26484 243390;243391;243392 193451;193452 193451 2 LGADAVGMSTVPEVIVAR Oxidation (M) 1799.9451 0.94513424 728 P00491 PNP Purine nucleoside phosphorylase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 77.768 77.82 2 1.0922E-37 89915 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 128.61 117.4 153920000 0 0 0 11041000 4497700 0 4488400 14858000 0 8560800 23859000 20359000 5592900 13603000 47061000 28982 728 26485 243393;243394;243395;243396;243397;243398;243399;243400;243401;243402 193453;193454;193455;193456;193457;193458;193459;193460;193461;193462 193456 877 10 LGADAVGMSTVPEVIVAR Unmodified 1783.9502 0.95021962 728 P00491 PNP Purine nucleoside phosphorylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 83.925 84.09 2 3.9294E-05 97458 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 93.766 88.272 61793000 0 0 0 0 0 0 0 6264400 0 0 7763100 7481900 0 6376500 33908000 28983 728 26485 243403;243404;243405;243406;243407 193463;193464;193465;193466 193464 4 LGADDVIDYK Unmodified 1107.5448 0.54480473 3577 Q8WWV3 RTN4IP1 Reticulon-4-interacting protein 1, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 58.586 58.355 2 0.021799 66374 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 46.457 28.054 21852000 0 0 0 5720000 5002000 0 6105700 0 5024700 0 0 0 0 0 0 28984 3577 26486 243408;243409;243410;243411;243412;243413 193467;193468;193469;193470 193468 4 LGADESEEEGRR Unmodified 1346.6062 0.60623578 375 O43847 NRD1 Nardilysin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 2 11.86 12.001 3 0.013157 9762 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 26.541 9.5988 60805000 0 0 0 3939500 2163700 3273100 3174400 0 3816300 4310400 0 10141000 6690700 7623600 15672000 28985 375 26487 243414;243415;243416;243417;243418;243419;243420;243421;243422;243423;243424 193471;193472 193472 2 LGADESEEEGRRGSLSNAGDPEIVK Unmodified 2614.2471 0.24706616 375 O43847 NRD1 Nardilysin yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 2 16 1 1 1 2 1 1 1 2 2 2 2 2 47.075 46.615 3;4 2.2408E-11 51341 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.324 39.786 254330000 9890500 0 12577000 7541300 9792600 0 3075200 0 9258700 15154000 36015000 41257000 32103000 18104000 59565000 28986 375 26488 243425;243426;243427;243428;243429;243430;243431;243432;243433;243434;243435;243436;243437;243438;243439;243440;243441;243442 193473;193474;193475;193476;193477;193478;193479;193480;193481;193482 193473 10 LGADLLSEAVQK Unmodified 1242.682 0.68196691 2769 Q5T1V6 DDX59 Probable ATP-dependent RNA helicase DDX59 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 75.106 74.433 2 1.3483E-05 92614 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.05 57.763 323000000 0 215510000 6969200 5882300 6567700 9949600 9583000 7684400 8123800 11047000 7103100 10226000 6476800 7601100 10283000 28987 2769 26489 243443;243444;243445;243446;243447;243448;243449;243450;243451;243452;243453;243454;243455;243456;243457;243458 193483;193484;193485;193486;193487;193488;193489;193490;193491;193492;193493;193494;193495;193496;193497 193485 14 LGAEDPWYCPNCK Unmodified 1608.6701 0.67009837 5198 Q9Y4E8 USP15 Ubiquitin carboxyl-terminal hydrolase 15 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 67.619 62.315 2 0.0020826 76166 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 80.239 75.94 57344000 0 57344000 0 0 0 0 0 0 0 0 0 0 0 0 0 28988 5198 26490 243459;243460 193498;193499;193500 193499 3 LGAFFLER Unmodified 951.5178 0.51780212 4120 Q9BRX5 GINS3 DNA replication complex GINS protein PSF3 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 79.038 79.193 2 0.018652 91017 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.265 45.482 37344000 0 0 0 0 0 0 0 0 3585500 2680300 4280800 6717400 3678900 3496900 12904000 28989 4120 26491 243461;243462;243463;243464;243465;243466;243467 193501;193502 193501 2 LGAFQAQEK Unmodified 990.51345 0.51344502 1582 P49642 PRIM1 DNA primase small subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 30.228 29.675 2 0.0031933 36644 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 136.16 90.437 514290000 0 336120000 0 13383000 10542000 13469000 16642000 10369000 11258000 13086000 19488000 22235000 0 16280000 31415000 28990 1582 26492 243468;243469;243470;243471;243472;243473;243474;243475;243476;243477;243478;243479;243480 193503;193504;193505;193506;193507;193508;193509;193510;193511;193512;193513;193514;193515 193509 10 LGAGEGGEASVSPEK Unmodified 1386.6627 0.66268803 2289 Q13428 TCOF1 Treacle protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 28.552 28.354 2 1.7304E-05 30425 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 96.64 83.287 50855000 0 9522200 0 0 2140300 3156900 2635200 2578100 2848300 3979400 7056800 4743300 0 5291800 6902900 28991 2289 26493 243481;243482;243483;243484;243485;243486;243487;243488;243489;243490;243491;243492;243493 193516;193517;193518;193519;193520;193521;193522;193523;193524;193525;193526;193527 193521 12 LGAGGGSPEK Unmodified 871.43995 0.43994572 5029 Q9UNE7 STUB1 E3 ubiquitin-protein ligase CHIP yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 7.7111 8.0618 2 0.019341 5702 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.869 23.67 10768000 0 0 0 0 0 0 0 0 0 0 5192800 0 0 0 5575400 28992 5029 26494 243494;243495 193528 193528 1 LGAGISGPVR Unmodified 925.53451 0.53451481 3234 Q8IW41 MAPKAPK5 MAP kinase-activated protein kinase 5 yes yes 0 0 0 By MS/MS 10 0 1 1 39.39 40.132 2 0.035593 43583 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.427 4.2675 6465000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6465000 28993 3234 26495 243496 193529 193529 1 LGAGPDGVEEIK Unmodified 1183.6085 0.60846762 1672 P51812 RPS6KA3 Ribosomal protein S6 kinase alpha-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.853 47.019 2 2.5971E-06 52715 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 128.91 94.733 320950000 0 0 0 18550000 15584000 36372000 20510000 17002000 16272000 35157000 37536000 30267000 25284000 27993000 40423000 28994 1672 26496 243497;243498;243499;243500;243501;243502;243503;243504;243505;243506;243507;243508 193530;193531;193532;193533;193534;193535;193536;193537;193538;193539;193540;193541;193542;193543;193544 193536 15 LGAGPGDAGEVQAHPFFR Unmodified 1824.8907 0.89073091 1158 P23443 RPS6KB1 Ribosomal protein S6 kinase beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.334 67.415 3 0.00040582 77149 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 51.495 39.294 196340000 0 0 0 9820800 7178900 25494000 8498300 17612000 12831000 15693000 16959000 24934000 12512000 15581000 29226000 28995 1158 26497 243509;243510;243511;243512;243513;243514;243515;243516;243517;243518;243519;243520 193545;193546;193547;193548;193549;193550;193551;193552;193553;193554;193555;193556;193557 193552 11 LGAHQLDSYSEDAK Unmodified 1532.7107 0.71070086 2624 Q16651 PRSS8 Prostasin;Prostasin light chain;Prostasin heavy chain yes yes 0 0 0 By MS/MS 10 0 1 1 36.745 36.277 3 0.014332 40573 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 22.911 15.872 4479200 0 0 0 4479200 0 0 0 0 0 0 0 0 0 0 0 28996 2624 26498 243521 193558 193558 1 LGALALPR Unmodified 809.51232 0.51232281 2968 Q6SPF0 SAMD1 Atherin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.571 62.669 2 0.017995 71622 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 64.803 20.111 143980000 0 0 0 10860000 9831800 10492000 10584000 10181000 8088400 13273000 13489000 18421000 10791000 12484000 15480000 28997 2968 26499 243522;243523;243524;243525;243526;243527;243528;243529;243530;243531;243532;243533 193559;193560 193559 2 LGALGGNTQEVTLQPGEYITK Unmodified 2188.1376 0.1375627 3792 Q96DA0 ZG16B Zymogen granule protein 16 homolog B yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 80.002 79.945 3 1.0267E-06 92361 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 64.249 55.43 25262000 0 0 0 2744400 2824000 0 0 7416700 0 0 0 8456400 3820100 0 0 28998 3792 26500 243534;243535;243536;243537;243538 193561;193562;193563;193564 193561 4 LGALQGDPEALTLYR Unmodified 1615.857 0.85697116 4805 Q9P253 VPS18 Vacuolar protein sorting-associated protein 18 homolog yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 80.897 80.986 2 0.00061872 93746 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 77.64 62.375 43828000 0 0 0 1323700 0 3568800 1954400 4052400 2115000 5207900 4724700 5178400 3318700 4289900 8093700 28999 4805 26501 243539;243540;243541;243542;243543;243544;243545;243546;243547;243548;243549 193565;193566;193567;193568;193569;193570;193571;193572 193566 8 LGALTAEEIALK Unmodified 1227.7075 0.70745338 2324 Q13601 KRR1 KRR1 small subunit processome component homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 76.891 76.224 2 0.0018775 87040 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 77.379 54.639 195240000 0 95619000 21914000 2740800 4683100 6776500 3244700 3014000 5323000 7870600 7541200 11051000 5572600 7463300 12422000 29000 2324 26502 243550;243551;243552;243553;243554;243555;243556;243557;243558;243559;243560;243561;243562;243563;243564 193573;193574;193575;193576;193577;193578;193579;193580;193581;193582;193583 193581 11 LGAMSAAPSQPNSQIR Oxidation (M) 1642.8097 0.80970339 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 35.294 35.48 2 2.0752E-27 38631 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 125.74 108.37 93417000 0 0 0 6399500 5476700 7013800 7656800 6039800 0 8614700 10751000 11628000 10672000 6802900 12363000 29001 4139 26503 243565;243566;243567;243568;243569;243570;243571;243572;243573;243574;243575 193584;193585;193586;193587;193588;193589;193590;193591;193592;193593;193594;193595 193592 5629 12 LGAMSAAPSQPNSQIR Unmodified 1626.8148 0.81478877 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.647 46.813 2 1.3802E-20 52702 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 113.69 98.057 75183000 0 0 0 3423700 4294900 4571400 3291900 4719200 3331900 7497200 10179000 11479000 9302100 4768200 8324500 29002 4139 26503 243576;243577;243578;243579;243580;243581;243582;243583;243584;243585;243586;243587 193596;193597;193598;193599;193600;193601;193602;193603;193604;193605 193603 10 LGANILLETFK Unmodified 1217.702 0.70197407 4669 Q9NVI1 FANCI Fanconi anemia group I protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 88.442 87.623 2 0.00035672 111718 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 122.26 92.448 24092000 12741000 0 0 0 1191500 0 0 805350 1077400 1992900 0 1180600 829990 1264900 3008600 29003 4669 26504 243588;243589;243590;243591;243592;243593;243594;243595;243596 193606;193607;193608 193608 3 LGAPAAGGEEEWGQQQR Unmodified 1782.8285 0.82852458 615 O94992 HEXIM1 Protein HEXIM1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.56 1.83 1 17 1 1 2 1 1 1 2 2 1 2 2 2 49.356 49.502 2;3 9.6158E-111 55677 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 193.28 182.07 410430000 0 0 0 22194000 25610000 22627000 17184000 0 18262000 42239000 55222000 39948000 61507000 58913000 46728000 29004 615 26505 243597;243598;243599;243600;243601;243602;243603;243604;243605;243606;243607;243608;243609;243610;243611;243612;243613;243614 193609;193610;193611;193612;193613;193614;193615;193616;193617;193618;193619;193620;193621;193622;193623;193624;193625;193626 193618 18 LGAPAAGGEEEWGQQQRQLGK Unmodified 2209.0876 0.087592814 615 O94992 HEXIM1 Protein HEXIM1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 59.167 53.12 3 0.0018737 66449 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 43.955 26.131 71635000 13623000 0 58012000 0 0 0 0 0 0 0 0 0 0 0 0 29005 615 26506 243615;243616 193627;193628 193628 2 LGAPALTSR Unmodified 884.50797 0.50796571 1336 P34897 SHMT2 Serine hydroxymethyltransferase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 39.292 39.698 2 0.009035 42957 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.897 37.394 48717000 0 0 0 0 0 2327300 0 0 0 2481500 11638000 5483300 0 5901500 20885000 29006 1336 26507 243617;243618;243619;243620;243621;243622 193629 193629 1 LGAPGFAWEPFR Unmodified 1346.6772 0.6771563 4518 Q9HCM7 FBRSL1 Fibrosin-1-like protein yes yes 0 0 0 By MS/MS 10 0 1 1 88.431 88.581 2 0.024046 102507 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.683 42.853 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29007 4518 26508 243623 193630 193630 1 LGAPQTHLGLK Unmodified 1133.6557 0.65569258 3770 Q96C19;Q9BUP0 EFHD2;EFHD1 EF-hand domain-containing protein D2;EF-hand domain-containing protein D1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45.576 44.865 2 1.4848E-05 48649 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 135.43 88.347 460280000 218870000 0 34649000 8957400 8825700 9962900 15236000 10035000 11067000 20883000 21374000 23565000 17586000 20993000 38280000 29008 3770 26509 243624;243625;243626;243627;243628;243629;243630;243631;243632;243633;243634;243635;243636;243637 193631;193632;193633;193634;193635;193636;193637;193638;193639;193640;193641;193642;193643;193644;193645 193634 15 LGAPSTGLSQAPSQIANSGSAGLINPAATVNDESGRDSEVSAR Unmodified 4152.0319 0.031935014 4325 Q9H0E3 SAP130 Histone deacetylase complex subunit SAP130 yes yes 0 0 1 By MS/MS 10 0 1 1 80.194 80.292 3 1.5327E-26 92873 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 47.522 43.247 5365700 0 0 0 0 0 0 0 0 0 5365700 0 0 0 0 0 29009 4325 26510 243638 193646 193646 1 LGAQASPGSRQEGLTQTYAPSGR Unmodified 2331.1567 0.15673501 2722 Q5D1E8 ZC3H12A Ribonuclease ZC3H12A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 44.835 45.259 3 4.0656E-10 49789 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.425 56.931 26941000 0 0 0 0 0 0 0 0 0 5655800 5159800 0 5049300 0 11076000 29010 2722 26511 243639;243640;243641;243642 193647;193648;193649;193650 193648 4 LGAQDDSLSQIDK Unmodified 1388.6783 0.6783381 526 O75635 SERPINB7 Serpin B7 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 48.985 48.853 2 6.5934E-13 55153 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 160.18 109.58 20539000 0 0 0 5771400 0 0 2805500 11962000 0 0 0 0 0 0 0 29011 526 26512 243643;243644;243645 193651 193651 1 LGAQLADLHLDNK Unmodified 1406.7518 0.75177781 4481 Q9HA64 FN3KRP Ketosamine-3-kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.29 3.67 4 2 11 3 2 1 1 1 1 1 1 1 1 1 1 1 1 69.366 67.488 2;3 2.0774E-07 87599 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.552 79.807 824570000 215930000 430090000 78490000 3340300 3102100 6351500 4566900 6229800 4209300 6145600 12862000 13816000 0 10767000 28672000 29012 4481 26513 243646;243647;243648;243649;243650;243651;243652;243653;243654;243655;243656;243657;243658;243659;243660;243661;243662 193652;193653;193654;193655;193656;193657;193658;193659;193660;193661;193662;193663;193664 193654 13 LGASNSPGQPNSVK Unmodified 1354.6841 0.68409218 1596 P49756 RBM25 RNA-binding protein 25 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21.641 21.012 2 0 22031 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 263.3 227.36 3119300000 21119000 179820000 1123200 157160000 144650000 192030000 284800000 199750000 210010000 249860000 320730000 299350000 235940000 279660000 343290000 29013 1596 26514 243663;243664;243665;243666;243667;243668;243669;243670;243671;243672;243673;243674;243675;243676;243677 193665;193666;193667;193668;193669;193670;193671;193672;193673;193674;193675;193676;193677;193678;193679;193680;193681;193682 193672 18 LGASNSPGQPNSVKR Unmodified 1510.7852 0.7852032 1596 P49756 RBM25 RNA-binding protein 25 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 16.909 17.093 3 0.019055 16513 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 23.901 16.699 47062000 0 0 0 4142300 7240700 0 4963100 3068300 2548100 3942400 6003400 8391300 0 0 6762300 29014 1596 26515 243678;243679;243680;243681;243682;243683;243684;243685;243686 193683;193684;193685 193685 3 LGASPLHVDLATLR Unmodified 1461.8304 0.83036248 2591 Q15904 ATP6AP1 V-type proton ATPase subunit S1 yes yes 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 78.516 78.649 3 0.0034631 90494 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.294 32.975 29565000 0 0 0 0 0 3097700 0 3509700 0 4271500 3186800 0 4038200 4105100 7356200 29015 2591 26516 243687;243688;243689;243690;243691;243692;243693 193686 193686 1 LGATLANGNQSEEAVAAYRR Unmodified 2090.0505 0.050479026 1627 P50542 PEX5 Peroxisomal targeting signal 1 receptor yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 54.425 54.56 3 1.0368E-17 61900 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 91.457 66.403 64196000 0 0 0 7160800 0 5347000 0 6918200 6946800 9263900 10589000 0 0 0 17970000 29016 1627 26517 243694;243695;243696;243697;243698;243699;243700 193687;193688;193689;193690;193691;193692;193693 193692 7 LGAVDESLSEETQK Unmodified 1504.7257 0.72568222 3866 Q96HE7 ERO1L ERO1-like protein alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.742 46.908 2 2.2064E-32 52351 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 160.18 160.18 120740000 0 0 0 9854300 5313200 10388000 6822900 3659700 3477100 7225800 17407000 14767000 6789400 9067200 25968000 29017 3866 26518 243701;243702;243703;243704;243705;243706;243707;243708;243709;243710;243711;243712 193694;193695;193696;193697;193698;193699;193700;193701;193702;193703;193704;193705;193706 193704 13 LGAVGGSGFK Unmodified 891.48142 0.48141661 624 O95163 IKBKAP Elongator complex protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.18 3.74 3 1 7 1 2 1 1 1 1 1 1 1 1 36.309 34.682 2 0.0015463 44794 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.41 58.835 955420000 520040000 243620000 64828000 6815600 0 0 12194000 9297100 0 0 0 25157000 16696000 17600000 39173000 29018 624 26519 243713;243714;243715;243716;243717;243718;243719;243720;243721;243722;243723 193707;193708;193709;193710;193711;193712;193713;193714 193707 5 LGAVYDVSHYNALLK Unmodified 1661.8777 0.8777066 1464 P42704 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS 7.6 3.67 3 7 1 1 1 1 1 1 1 1 1 1 79.127 77.692 3 0.00021326 94982 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 86.291 79.71 158030000 85732000 10210000 9139100 0 0 7776000 0 7531000 4524300 0 4289700 0 2552200 3612800 22667000 29019 1464 26520 243724;243725;243726;243727;243728;243729;243730;243731;243732;243733 193715;193716;193717 193717 3 LGAVYGFVR Unmodified 980.54435 0.54435122 4276 Q9BZV1 UBXN6 UBX domain-containing protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 67.008 67.141 2 0.003469 76961 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 94.407 76.372 42034000 0 0 0 1994800 0 3664100 3254600 0 2066700 4571400 4612100 5215700 4671900 3466200 8516900 29020 4276 26521 243734;243735;243736;243737;243738;243739;243740;243741;243742;243743;243744 193718;193719;193720;193721;193722;193723;193724;193725;193726;193727;193728 193719 11 LGAYYVTGK Unmodified 970.51238 0.51238239 3763 Q96BR5 COA7 Cytochrome c oxidase assembly factor 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 45.633 40.11 2 0.02838 55197 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.993 40.468 158220000 80696000 74098000 3426900 0 0 0 0 0 0 0 0 0 0 0 0 29021 3763 26522 243745;243746;243747 193729;193730;193731 193730 3 LGCFNLTVK Unmodified 1050.5532 0.55320134 3658 Q92769 HDAC2 Histone deacetylase 2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 68.929 69.103 2 0.030755 78354 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 48.036 23.404 5828400 0 0 0 0 0 0 0 0 1644500 0 0 0 0 4183900 0 29022 3658 26523 243748;243749 193732 193732 1 LGCQDAFPEVYDK Unmodified 1540.6868 0.68679429 2527 Q15392 DHCR24 Delta(24)-sterol reductase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 67.952 66.304 2 0.0048564 76616 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 60.434 45.168 35806000 0 25329000 0 3350300 2859700 0 0 0 0 0 4266800 0 0 0 0 29023 2527 26524 243750;243751;243752;243753 193733;193734;193735;193736 193736 4 LGCRQFVTPADVVSGNPK Unmodified 1943.9887 0.98873039 986 P13797 PLS3 Plastin-3 yes yes 0 0 1 By MS/MS 2 0 2 2 74.493 66.362 2;3 5.6872E-35 87640 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 126.95 111.19 143210000 143210000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29024 986 26525 243754;243755 193737;193738 193737 1 LGDDEVRTDLK Unmodified 1259.6357 0.635745 2407 Q14444 CAPRIN1 Caprin-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.78 3.55 8 1 23 3 4 2 2 2 1 2 2 2 2 2 2 2 2 2 36.022 35.179 2;3 2.0643E-55 45105 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 252.82 190.83 5162500000 297140000 724330000 6655600 308610000 278880000 225850000 339730000 296540000 281040000 421480000 385770000 456990000 334370000 294830000 510260000 29025 2407 26526 243756;243757;243758;243759;243760;243761;243762;243763;243764;243765;243766;243767;243768;243769;243770;243771;243772;243773;243774;243775;243776;243777;243778;243779;243780;243781;243782;243783;243784;243785;243786;243787 193739;193740;193741;193742;193743;193744;193745;193746;193747;193748;193749;193750;193751;193752;193753;193754;193755;193756;193757;193758;193759;193760 193744 12 LGDDIDLIVR Unmodified 1127.6186 0.61863837 278 O15371 EIF3D Eukaryotic translation initiation factor 3 subunit D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.986 78.045 2 0.00099736 89217 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 110.87 75.427 98442000 0 0 0 3444300 4782200 7610800 5117900 2944400 6750200 9061900 9006700 12953000 5353900 12065000 19351000 29026 278 26527 243788;243789;243790;243791;243792;243793;243794;243795;243796;243797;243798;243799 193761;193762;193763;193764;193765;193766;193767;193768;193769;193770;193771;193772;193773 193769 13 LGDDIDLIVRCEHDGVMTGANGEVSFINIK Unmodified 3286.5962 0.59621173 278 O15371 EIF3D Eukaryotic translation initiation factor 3 subunit D yes yes 0 0 1 By MS/MS 2 0 1 1 94.801 86.67 4 2.8935E-15 112118 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.952 59.028 20340000 20340000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29027 278 26528 243800 193774;193775;193776 193776 3 LGDEDEEIDGDTNK Unmodified 1548.6427 0.64274045 895 P09884 POLA1 DNA polymerase alpha catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.34 1 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 35.853 35.65 2 3.388E-117 33725 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 208.17 195.94 261170000 40513000 7907200 0 13777000 10061000 20328000 13369000 12530000 13899000 16749000 21648000 25674000 19137000 19374000 26208000 29028 895 26529 243801;243802;243803;243804;243805;243806;243807;243808;243809;243810;243811;243812;243813;243814;243815 193777;193778;193779;193780;193781;193782;193783;193784;193785;193786;193787;193788;193789;193790;193791;193792;193793 193778 17 LGDFGLAR Unmodified 847.4552 0.45520186 1664 P51617;P51955 IRAK1;NEK2 Interleukin-1 receptor-associated kinase 1;Serine/threonine-protein kinase Nek2 yes no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 55.913 55.739 2 0.016731 63243 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 66.799 0 26447000 0 0 0 5123600 4961500 5563800 4975400 5822600 0 0 0 0 0 0 0 29029 1664 26530 243816;243817;243818;243819;243820 193794;193795 193795 2 LGDFGLSR Unmodified 863.45012 0.45011648 2114 Q05397 PTK2 Focal adhesion kinase 1 no no 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 53.041 53.347 2 0.0067966 59469 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 96.492 19.209 181230000 0 0 0 0 0 33243000 13174000 14611000 15866000 0 28061000 29371000 0 15665000 31239000 29030 2114 26531 243821;243822;243823;243824;243825;243826;243827;243828 193796;193797;193798;193799;193800;193801;193802;193803 193801 8 LGDFPYVSILDPR Unmodified 1490.7769 0.77692993 598 O94888 UBXN7 UBX domain-containing protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 92.544 92.689 2 0.012516 107455 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.001 32.047 11597000 0 0 0 0 0 766770 0 839910 762700 2654500 1499700 0 0 0 5073500 29031 598 26532 243829;243830;243831;243832;243833;243834 193804;193805 193805 2 LGDGEVFFLK Unmodified 1123.5914 0.59136099 7 A1A4S6 ARHGAP10 Rho GTPase-activating protein 10 yes yes 0 0 0 By MS/MS 2 0 1 1 85.097 82.664 2 0.029043 100112 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 59.35 40.567 2462100 0 0 2462100 0 0 0 0 0 0 0 0 0 0 0 0 29032 7 26533 243835 193806 193806 1 LGDGVDKDEAK Unmodified 1145.5564 0.55643205 3763 Q96BR5 COA7 Cytochrome c oxidase assembly factor 7 yes yes 0 0 1 By MS/MS 3 0 1 1 13.571 10.149 3 0.0094102 12772 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 59.367 31.595 36343000 0 36343000 0 0 0 0 0 0 0 0 0 0 0 0 0 29033 3763 26534 243836 193807 193807 1 LGDHQSPATPAFK Unmodified 1367.6834 0.68336389 3518 Q8TEQ6 GEMIN5 Gem-associated protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.12 3.79 4 1 3 2 2 1 1 1 1 38.792 35.996 2;3 0.001793 45188 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 65.295 54.969 378790000 1899600 131340000 206880000 0 0 20394000 0 15994000 0 0 0 0 2288800 0 0 29034 3518 26535 243837;243838;243839;243840;243841;243842;243843;243844 193808;193809;193810;193811;193812;193813 193810 5 LGDIDAATEQK Unmodified 1159.5721 0.57208211 4223 Q9BXB5 OSBPL10 Oxysterol-binding protein-related protein 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 32.507 32.661 2 0.00039146 35924 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 86.898 51.603 17275000 0 0 0 0 0 5949000 0 0 0 5984700 0 0 0 5341400 0 29035 4223 26536 243845;243846;243847;243848;243849;243850 193814;193815;193816;193817;193818;193819 193814 5 LGDIMGVK Unmodified 831.45242 0.45242467 3642 Q92620 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 yes yes 0 0 0 By MS/MS 2 0 1 1 56.154 50.34 2 0.033116 64898 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.616 14.007 90609000 0 90609000 0 0 0 0 0 0 0 0 0 0 0 0 0 29036 3642 26537 243851 193820 193820 1 LGDISAVSTEPGK Unmodified 1272.6561 0.65614609 3240 Q8IWE5 PLEKHM2 Pleckstrin homology domain-containing family M member 2 yes yes 0 0 0 By MS/MS 2 0 1 1 50.89 45.144 2 0.0021071 58595 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.08 78.189 35607000 0 35607000 0 0 0 0 0 0 0 0 0 0 0 0 0 29037 3240 26538 243852 193821 193821 1 LGDLDVALHQAK Unmodified 1278.6932 0.6932003 96 CON__Q5XKE5;Q5XKE5 KRT79 Keratin, type II cytoskeletal 79 yes no 0 0 0 By MS/MS 10 0 1 1 57.482 56.809 3 0.027463 65283 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 34.185 26.506 + 23961000 0 0 0 23961000 0 0 0 0 0 0 0 0 0 0 0 29038 96 26539 243853 193822 193822 1 LGDLGAIDEK Unmodified 1029.5342 0.53424004 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 2 1 1 1 1 1 1 1 1 1 49.742 49.898 2 0.00088144 56411 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 118.18 91.215 490620000 0 0 0 21787000 23965000 30164000 33645000 32996000 26878000 42798000 52903000 55873000 45596000 42384000 81629000 29039 4634 26540 243854;243855;243856;243857;243858;243859;243860;243861;243862;243863;243864;243865;243866 193823;193824;193825;193826;193827;193828;193829;193830;193831;193832 193825 9 LGDLGLGR Unmodified 799.4552 0.45520186 3508 Q8TDX7;Q9HC98 NEK7;NEK6 Serine/threonine-protein kinase Nek7;Serine/threonine-protein kinase Nek6 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 47.651 47.699 2 0.014036 54305 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 71.134 12.888 117640000 0 0 0 6635600 7741200 17651000 9771100 13456000 6263400 17364000 16395000 0 12259000 10104000 0 29040 3508 26541 243867;243868;243869;243870;243871;243872;243873;243874;243875;243876 193833;193834;193835;193836;193837 193837 5 LGDLLISQFSGPSAEQMCK Oxidation (M) 2095.9918 0.99182644 3693 Q92974 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 83.137 83.235 2;3 0.00020791 96424 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 51.875 45.903 41153000 0 0 0 0 3194500 0 0 3383800 0 1753500 9379500 7240600 0 6824500 9377000 29041 3693 26542 243877;243878;243879;243880;243881;243882;243883 193838;193839;193840;193841 193840 5260 4 LGDLYEEEMR Oxidation (M) 1269.5547 0.55471749 870 P08670 VIM Vimentin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 42.935 43.122 2 0.0050863 47872 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 61.78 56.47 156340000 0 0 0 12600000 0 14329000 12541000 9978000 9359400 16269000 20018000 24907000 23350000 12988000 0 29042 870 26543 243884;243885;243886;243887;243888;243889;243890;243891;243892;243893 193842;193843;193844;193845;193846;193847;193848;193849;193850;193851 193847 1117 10 LGDLYEEEMR Unmodified 1253.5598 0.55980286 870 P08670 VIM Vimentin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.327 56.455 2 0.0016808 63595 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 103.55 89.828 301050000 0 0 0 18899000 22327000 24381000 0 13228000 14115000 29969000 31566000 38148000 25187000 26599000 56634000 29043 870 26543 243894;243895;243896;243897;243898;243899;243900;243901;243902;243903;243904;243905 193852;193853;193854;193855;193856;193857;193858;193859;193860;193861;193862;193863;193864;193865 193863 14 LGDLYEEEMRELR Oxidation (M) 1667.7825 0.78248559 870 P08670 VIM Vimentin yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 60.477 60.37 3 0.0026359 68079 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.28 30.593 47350000 0 0 0 7261900 7837800 0 0 0 0 0 0 0 0 11504000 20746000 29044 870 26544 243906;243907;243908;243909 193866;193867 193866 1117 2 LGDLYEEEMRELR Unmodified 1651.7876 0.78757097 870 P08670 VIM Vimentin yes yes 0 0 1 By MS/MS 10 0 1 1 73.312 73.682 3 0.01241 84368 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.3 25.422 10378000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10378000 29045 870 26544 243910 193868 193868 1 LGDMRNSATFK Oxidation (M) 1254.6027 0.60267073 325 O43399 TPD52L2 Tumor protein D54 yes yes 0 1 1 By MS/MS 2 0 1 1 24.472 19.395 2 0.020224 27702 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.171 35.014 97379000 97379000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29046 325 26545 243911 193869 193869 416 0 LGDNTGELQEK Unmodified 1202.5779 0.57789577 3036 Q76I76 SSH2 Protein phosphatase Slingshot homolog 2 yes yes 0 0 0 By MS/MS 2 0 1 1 27.507 23.202 2 0.025743 30615 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.098 26.752 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29047 3036 26546 243912 193870 193870 1 LGDPEELMFQYFK Oxidation (M) 1631.7541 0.75414558 2465 Q14CX7 NAA25 N-alpha-acetyltransferase 25, NatB auxiliary subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 2 2 2 1 1 1 84.297 83.967 2;3 7.543E-13 96745 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 128.03 121.93 704800000 0 24710000 0 0 0 0 135740000 266820000 232830000 15340000 12794000 16561000 0 0 0 29048 2465 26547 243913;243914;243915;243916;243917;243918;243919;243920;243921;243922 193871;193872;193873;193874;193875;193876;193877;193878;193879;193880;193881 193875 4058 8 LGDPEELMFQYFK Unmodified 1615.7592 0.75923095 2465 Q14CX7 NAA25 N-alpha-acetyltransferase 25, NatB auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 95.762 94.707 2 0.0012213 109972 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 64.297 60.251 39296000 0 26309000 0 0 0 0 1810500 7055200 4120900 0 0 0 0 0 0 29049 2465 26547 243923;243924;243925;243926 193882;193883;193884;193885 193884 4 LGDSHDLQR Unmodified 1039.5047 0.50467125 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By matching 10 0 7 1 1 1 1 1 1 1 14.005 14.314 2 0.021454 13506 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 52.255 33.473 24147000 0 0 0 0 0 0 0 1280000 0 2268500 3694800 4575800 3105500 2642300 6579700 29050 2344 26548 243927;243928;243929;243930;243931;243932;243933 193886;193887 193887 2 LGDSQLVK Unmodified 858.48108 0.48108226 2608 Q16531 DDB1 DNA damage-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 29.132 29.315 2 0.0099559 32098 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 81.215 16.648 410170000 0 0 0 28255000 15322000 23453000 22694000 17861000 15991000 26774000 50112000 63775000 33495000 0 112440000 29051 2608 26549 243934;243935;243936;243937;243938;243939;243940;243941;243942;243943;243944 193888;193889;193890;193891;193892;193893;193894 193894 3 LGDSSGPALK Unmodified 943.49746 0.4974606 4898 Q9UHD8 SEPT9 Septin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 25.835 26.072 2 0.0060455 27923 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 66.504 38.67 29324000 0 0 0 0 0 5237200 4798100 0 5813400 0 0 9604300 3871400 0 0 29052 4898 26550 243945;243946;243947;243948;243949;243950;243951;243952;243953 193895;193896;193897;193898;193899;193900;193901;193902 193897 8 LGDTALHAAAWK Unmodified 1252.6564 0.65642086 3678 Q92882 OSTF1 Osteoclast-stimulating factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.14 2.8 6 1 2 2 2 1 57.85 52.823 2;3 3.1171E-14 72197 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 147.73 127.21 810490000 527980000 162910000 104850000 0 0 0 0 0 0 0 0 0 0 0 14751000 29053 3678 26551 243954;243955;243956;243957;243958;243959;243960 193903;193904;193905;193906;193907;193908;193909;193910;193911 193906 7 LGDTPGVSYSDIAAR Unmodified 1520.7471 0.74708636 4359 Q9H269 VPS16 Vacuolar protein sorting-associated protein 16 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 62.873 63.04 2 1.2188E-05 71365 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.103 72.073 67065000 0 0 0 0 4338300 6179800 5469600 7936800 0 7000700 7883600 9637300 0 6137100 12482000 29054 4359 26552 243961;243962;243963;243964;243965;243966;243967;243968;243969 193912;193913;193914;193915;193916;193917;193918;193919;193920;193921 193916 10 LGDTYPSISNAR Unmodified 1292.6361 0.63607935 4394 Q9H4A4 RNPEP Aminopeptidase B yes yes 0 0 0 By matching By MS/MS By matching 10 0 3 1 1 1 47.105 47.516 2 0.0092956 53623 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 47.894 24.371 20762000 0 0 0 0 0 5695400 0 0 0 0 4771200 0 0 0 10295000 29055 4394 26553 243970;243971;243972 193922 193922 1 LGDVGMAELCPGLLHPSSR Oxidation (M) 2023.9819 0.98193045 979 P13489 RNH1 Ribonuclease inhibitor yes yes 0 1 0 By MS/MS 10 0 1 1 74.459 74.554 3 0.00037221 86270 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 47.568 37.646 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29056 979 26554 243973 193923 193923 1304 1 LGDVISIQPCPDVK Unmodified 1539.7967 0.79667909 1755 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.321 74.382 2 9.1515E-08 85726 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 93.561 79.475 225250000 0 0 0 12317000 8496900 6945500 10461000 10806000 6234100 11581000 38241000 30451000 6186200 23589000 59941000 29057 1755 26555 243974;243975;243976;243977;243978;243979;243980;243981;243982;243983;243984;243985 193924;193925;193926;193927;193928;193929;193930;193931;193932;193933;193934;193935 193929 12 LGDVYVNDAFGTAHR Unmodified 1633.7849 0.78486885 733;837 P00558;P07205 PGK1;PGK2 Phosphoglycerate kinase 1;Phosphoglycerate kinase 2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.96 2.69 3 20 2 1 1 1 1 1 1 2 2 3 2 1 2 3 65.313 64.961 2;3 1.7253E-53 73591 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 156.36 120.71 2260900000 21695000 0 31443000 20308000 9785700 23450000 21966000 25697000 17783000 31509000 294420000 276940000 26525000 270870000 1188500000 29058 733;837 26556 243986;243987;243988;243989;243990;243991;243992;243993;243994;243995;243996;243997;243998;243999;244000;244001;244002;244003;244004;244005;244006;244007;244008 193936;193937;193938;193939;193940;193941;193942;193943;193944;193945;193946;193947;193948;193949;193950;193951;193952;193953;193954;193955;193956;193957;193958 193943 18 LGDYGLAK Unmodified 835.44397 0.44396847 3496 Q8TD19 NEK9 Serine/threonine-protein kinase Nek9 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 41.617 35.724 2 0.022229 46668 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.753 27.206 147040000 9084800 137960000 0 0 0 0 0 0 0 0 0 0 0 0 0 29059 3496 26557 244009;244010 193959 193959 1 LGEAEYPHHR Unmodified 1207.5734 0.57341951 3638 Q92613 JADE3 Protein Jade-3 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching 10 0 7 1 1 1 1 1 1 1 15.15 15.248 3 0.027545 14632 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 32.523 22.868 55262000 0 0 0 4718800 2346300 3882200 0 0 2505900 11955000 0 22539000 0 7314800 0 29060 3638 26558 244011;244012;244013;244014;244015;244016;244017 193960 193960 1 LGEASDSELADADK Unmodified 1419.6365 0.63653286 2759 Q5SW79 CEP170 Centrosomal protein of 170 kDa yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.187 37.367 2 4.7055E-14 40904 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 140.24 118.87 130270000 0 0 0 7956900 7694200 11406000 9182200 7194500 7038000 11825000 12631000 16281000 14272000 11479000 13309000 29061 2759 26559 244018;244019;244020;244021;244022;244023;244024;244025;244026;244027;244028;244029 193961;193962;193963;193964;193965;193966;193967;193968;193969;193970;193971;193972 193970 12 LGEDESLLMK Unmodified 1133.5638 0.56382561 2727 Q5H9R7 PPP6R3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 60.054 60.047 2 0.02504 68226 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 44.719 23.419 22678000 0 0 0 3196300 2064400 3821300 0 3648400 0 0 3231000 0 0 0 6716100 29062 2727 26560 244030;244031;244032;244033;244034;244035 193973 193973 1 LGEDLNK Unmodified 787.40758 0.40758296 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 17.983 18.099 2 0.0174 17562 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 114.02 54.414 146950000 0 0 0 7536800 8127300 9855000 11596000 0 11943000 13547000 0 0 27178000 22701000 34469000 29063 2392 26561 244036;244037;244038;244039;244040;244041;244042;244043;244044 193974;193975;193976 193974 3 LGEEAFFYHSNCK Unmodified 1600.698 0.69802768 4787 Q9P016 THYN1 Thymocyte nuclear protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 64.605 60.848 3 0.041228 75643 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 40.066 35.914 2834200 0 0 2834200 0 0 0 0 0 0 0 0 0 0 0 0 29064 4787 26562 244045 193977 193977 0 LGEEDPVLPPVPDGAGEPTVPEGAIWEGSGLQPK Unmodified 3436.7038 0.70383115 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 95.704 91.666 3 0.0014976 109812 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 26.659 24.575 36824000 0 36824000 0 0 0 0 0 0 0 0 0 0 0 0 0 29065 645 26563 244046;244047 193978;193979 193979 2 LGEFFQTK Unmodified 968.49673 0.49673232 2481 Q15029 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 59.9 58.566 2 0.0024727 72096 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 123.69 75.774 1064500000 274150000 172880000 114570000 23780000 26917000 35840000 31858000 26656000 30275000 45606000 48532000 56517000 56550000 53141000 67216000 29066 2481 26564 244048;244049;244050;244051;244052;244053;244054;244055;244056;244057;244058;244059;244060;244061;244062;244063 193980;193981;193982;193983;193984;193985;193986;193987;193988;193989;193990;193991;193992;193993;193994;193995;193996;193997;193998;193999;194000;194001 193987 22 LGEGCEPISK Unmodified 1088.5172 0.51720977 3484 Q8TBZ6 TRMT10A tRNA methyltransferase 10 homolog A yes yes 0 0 0 By MS/MS 10 0 2 2 26.769 27.094 2 0.01172 27939 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 73.985 30.177 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29067 3484 26565 244064;244065 194002;194003 194002 2 LGEGEGSMTK Unmodified 1007.4594 0.45936054 5254;5032 Q9UNH7;Q9Y5X3 SNX6;SNX5 Sorting nexin-6;Sorting nexin-6, N-terminally processed;Sorting nexin-5 no no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.6 3.67 3 7 1 1 1 1 1 1 1 1 1 1 16.565 15.626 2 0.0024915 18963 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.2 68.902 553000000 17279000 371970000 2352500 9993000 0 28355000 0 11566000 7387900 24979000 0 0 23539000 0 55578000 29068 5032;5254 26566 244066;244067;244068;244069;244070;244071;244072;244073;244074;244075 194004;194005;194006;194007;194008;194009 194006 3 LGEGEGSMTK Oxidation (M) 1023.4543 0.45427516 5254;5032 Q9UNH7;Q9Y5X3 SNX6;SNX5 Sorting nexin-6;Sorting nexin-6, N-terminally processed;Sorting nexin-5 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.12 3 13 1 1 1 1 1 1 1 2 1 2 1 1 1 1 7.2299 6.5775 2 0.000164 4673 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 125.16 88.319 330640000 18033000 213780000 3867100 0 7201500 16049000 0 7387900 10966000 21966000 29851000 1531800 0 0 0 29069 5032;5254 26566 244076;244077;244078;244079;244080;244081;244082;244083;244084;244085;244086;244087;244088;244089;244090;244091 194010;194011;194012;194013;194014;194015;194016;194017;194018;194019;194020 194011 6380 11 LGEGSYGSVFK Unmodified 1142.5608 0.56078914 2250 Q13188 STK3 Serine/threonine-protein kinase 3;Serine/threonine-protein kinase 3 36kDa subunit;Serine/threonine-protein kinase 3 20kDa subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 57.532 57.196 2 0.00060942 73437 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.048 67.973 218450000 0 125100000 0 0 0 8199900 0 8177300 6206400 10228000 11595000 17810000 8130400 6018000 16987000 29070 2250 26567 244092;244093;244094;244095;244096;244097;244098;244099;244100;244101 194021;194022;194023;194024;194025 194022 4 LGEGTYATVFK Unmodified 1184.6077 0.60773933 2132 Q07002 CDK18 Cyclin-dependent kinase 18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 64.442 64.636 2 0.00032914 73584 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 89.029 16.15 82828000 0 0 0 0 0 11486000 10360000 12367000 9684200 0 0 0 10650000 9052500 19229000 29071 2132 26568 244102;244103;244104;244105;244106;244107;244108 194026;194027;194028;194029;194030;194031;194032 194029 7 LGEGTYATVYK Unmodified 1200.6027 0.60265396 2037 Q00536 CDK16 Cyclin-dependent kinase 16 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 47.681 46.773 2 0.0047336 59247 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.013 73.759 207880000 0 56048000 0 10220000 0 12767000 0 0 13031000 24968000 30076000 32058000 15564000 13144000 0 29072 2037 26569 244109;244110;244111;244112;244113;244114;244115;244116;244117;244118 194033;194034;194035 194033 3 LGEHNIDVLEGNEQFINAAK Unmodified 2210.0968 0.096760517 54 CON__P00761 yes yes 0 0 0 By MS/MS 2 0 1 1 83.132 75.002 3 0.00030732 98241 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 37.884 28.952 + 9836900 9836900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29073 54 26570 244119 194036 194036 1 LGEINVIGEPFLNVNCEHIK Unmodified 2294.1729 0.17290235 1332 P33991 MCM4 DNA replication licensing factor MCM4 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 90.24 87.871 3 1.9629E-05 100554 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.87 46.614 49931000 0 37400000 0 0 0 0 0 0 0 0 0 0 0 0 12530000 29074 1332 26571 244120;244121 194037;194038 194038 2 LGEIVTTIPTIGFNVETVEYK Unmodified 2322.2359 0.23587976 2011;1071;2012 P84077;P61204;P18085;P84085 ARF1;ARF3;ARF4;ARF5 ADP-ribosylation factor 1;ADP-ribosylation factor 3;ADP-ribosylation factor 4;ADP-ribosylation factor 5 no no 0 0 0 By MS/MS By MS/MS By MS/MS 2.36 0.481 7 4 4 6 1 97.439 92.776 2;3 1.1749E-86 112310 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 156.39 155.17 960600000 231680000 685160000 43757000 0 0 0 0 0 0 0 0 0 0 0 0 29075 2011;1071;2012 26572 244122;244123;244124;244125;244126;244127;244128;244129;244130;244131;244132 194039;194040;194041;194042;194043;194044;194045;194046;194047 194044 9 LGELAGESVENQEVQSK Unmodified 1815.885 0.88503641 3999 Q96T58 SPEN Msx2-interacting protein yes yes 0 0 0 By MS/MS 10 0 1 1 49.418 49.477 2 2.3654E-06 55918 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 89.629 65.779 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29076 3999 26573 244133 194048 194048 1 LGELELQLK Unmodified 1041.607 0.60701105 2823 Q5VW36 FOCAD Focadhesin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.449 74.512 2 0.0031256 85773 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 91.069 36.457 95597000 0 0 0 4436600 8010200 11327000 8052900 7868800 7050600 12604000 5906000 11774000 5210600 6408600 6947700 29077 2823 26574 244134;244135;244136;244137;244138;244139;244140;244141;244142;244143;244144;244145 194049;194050;194051;194052;194053;194054;194055;194056;194057;194058;194059;194060 194058 12 LGELGSSAESK Unmodified 1076.535 0.53496832 5191 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 26.532 22.317 2 0.0011356 29377 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.42 64.155 996020 0 996020 0 0 0 0 0 0 0 0 0 0 0 0 0 29078 5191 26575 244146;244147 194061;194062 194061 2 LGELLHDK Unmodified 923.50763 0.50763136 2831 Q5VZE5 NAA35 N-alpha-acetyltransferase 35, NatC auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 31.727 31.817 2 0.017303 33619 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 65.88 23.988 175640000 0 0 0 9163700 9327100 8025300 2910700 0 2565300 30611000 44290000 68747000 0 0 0 29079 2831 26576 244148;244149;244150;244151;244152;244153;244154;244155 194063;194064;194065;194066 194065 4 LGELPEINGK Unmodified 1068.5815 0.58152458 2192 Q12800 TFCP2 Alpha-globin transcription factor CP2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 59.197 58.847 2 0.0018673 74953 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.81 73.45 180250000 0 69636000 0 5272200 3986000 9755000 7203300 6193200 6348800 10781000 11319000 8965500 10270000 10533000 19988000 29080 2192 26577 244156;244157;244158;244159;244160;244161;244162;244163;244164;244165;244166;244167;244168 194067;194068;194069;194070;194071;194072;194073;194074;194075;194076;194077;194078 194070 10 LGELQDEAR Unmodified 1029.5091 0.50908792 3216 Q8IUC6 TICAM1 TIR domain-containing adapter molecule 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 28.704 29.023 2 0.02342 30269 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 51.066 17.27 3637200 0 0 0 0 0 0 0 0 0 0 0 0 0 3637200 0 29081 3216 26578 244169;244170 194079;194080 194079 2 LGELQTTAGR Unmodified 1044.5564 0.55637247 960;2056;83 CON__Q01546;P12035;CON__P12035;Q01546 KRT3;KRT76 Keratin, type II cytoskeletal 3;Keratin, type II cytoskeletal 2 oral no no 0 0 0 By MS/MS 10 0 1 1 30.006 30.045 2 0.032915 32547 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 74.941 19.068 + 15411000 0 0 0 0 0 0 15411000 0 0 0 0 0 0 0 0 29082 83;960;2056 26579 244171 194081 194081 0 LGELSDK Unmodified 760.39668 0.39668393 2428 Q14677 CLINT1 Clathrin interactor 1 yes yes 0 0 0 By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 18.297 18.476 2 0.023846 17311 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.006 22.629 201980000 0 0 0 11847000 18353000 16145000 17731000 17563000 13792000 19780000 20680000 21595000 22741000 0 21752000 29083 2428 26580 244172;244173;244174;244175;244176;244177;244178;244179;244180;244181;244182 194082;194083 194083 2 LGELTGTVK Unmodified 916.52295 0.52294707 346 O43615 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.042 37.221 2 0.0031256 39658 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.069 42.01 461280000 0 0 0 21598000 22328000 38995000 27356000 39847000 30562000 41191000 44668000 66855000 50705000 28685000 48486000 29084 346 26581 244183;244184;244185;244186;244187;244188;244189;244190;244191;244192;244193;244194 194084;194085;194086;194087;194088 194086 5 LGELTMQLHPVADSSPAGAK Oxidation (M) 2037.0201 0.0200901 3263 Q8IXM2 BAP18 Chromatin complexes subunit BAP18 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 61.042 59.836 3 5.4644E-05 67886 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 50.232 34.64 25978000 0 0 9985700 0 0 5200000 10792000 0 0 0 0 0 0 0 0 29085 3263 26582 244195;244196;244197 194089;194090;194091;194092 194090 4877 4 LGELTMQLHPVADSSPAGAK Unmodified 2021.0252 0.025175478 3263 Q8IXM2 BAP18 Chromatin complexes subunit BAP18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 6.8 3.92 2 3 1 1 1 1 1 73.472 71.365 3 1.6445E-07 92728 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.568 49.923 68378000 49567000 0 10508000 0 0 0 1829500 2951200 0 3521700 0 0 0 0 0 29086 3263 26582 244198;244199;244200;244201;244202 194093;194094;194095 194093 2 LGELVHNGCIK Unmodified 1238.6441 0.64414162 199 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 38.64 38.821 3 0.0081345 42276 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 42.802 25.582 45395000 0 0 0 2346600 1596300 2902500 2191000 0 2754100 3256900 5400800 11626000 4689600 3350100 5281200 29087 199 26583 244203;244204;244205;244206;244207;244208;244209;244210;244211;244212;244213 194096;194097;194098;194099;194100 194100 5 LGEMWNNLNDSEK Oxidation (M) 1564.6828 0.68277155 274 O15347 HMGB3 High mobility group protein B3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.42 3.66 3 1 8 1 2 1 1 1 1 1 1 2 1 52.561 51.266 2 4.0289E-22 62587 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 147.28 132.59 289090000 0 206480000 14103000 0 4864200 6115100 4395600 0 0 0 12001000 16538000 0 6429200 18160000 29088 274 26584 244214;244215;244216;244217;244218;244219;244220;244221;244222;244223;244224;244225 194101;194102;194103;194104;194105;194106;194107;194108;194109 194103 361 9 LGEMWNNLNDSEK Unmodified 1548.6879 0.68785692 274 O15347 HMGB3 High mobility group protein B3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 6.12 3.89 3 1 4 1 2 1 1 1 1 1 67.524 64.878 2 1.9015E-25 79779 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 158.41 131.73 235770000 12904000 137020000 19253000 0 0 0 0 5898400 0 0 15029000 0 0 10486000 35173000 29089 274 26584 244226;244227;244228;244229;244230;244231;244232;244233 194110;194111;194112;194113;194114 194114 5 LGEMWNNTAADDK Unmodified 1463.6351 0.63509307 883 P09429;B2RPK0 HMGB1;HMGB1P1 High mobility group protein B1;Putative high mobility group protein B1-like 1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 51.852 50.426 2 2.858E-25 57388 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 185.77 179.17 3454800000 59719000 2449600000 11494000 44667000 48330000 59207000 36825000 45338000 56237000 105460000 0 98109000 74923000 65956000 299000000 29090 883 26585 244234;244235;244236;244237;244238;244239;244240;244241;244242;244243;244244;244245;244246;244247;244248 194115;194116;194117;194118;194119;194120;194121;194122;194123;194124;194125;194126;194127;194128;194129;194130;194131;194132;194133;194134;194135;194136;194137 194126 23 LGEMWNNTAADDK Oxidation (M) 1479.63 0.63000769 883 P09429;B2RPK0 HMGB1;HMGB1P1 High mobility group protein B1;Putative high mobility group protein B1-like 1 yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.22 3.54 9 15 13 1 22 1 1 1 2 1 1 1 1 1 1 1 1 1 42.233 39.206 2 1.5719E-29 47265 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 160.36 150.07 1916800000 37931000 1464100000 13870000 25109000 24323000 23605000 19127000 20866000 24260000 32033000 64214000 42360000 28131000 24223000 72722000 29091 883 26585 244249;244250;244251;244252;244253;244254;244255;244256;244257;244258;244259;244260;244261;244262;244263;244264;244265;244266;244267;244268;244269;244270;244271;244272;244273;244274;244275;244276;244277;244278;244279;244280;244281;244282;244283;244284;244285 194138;194139;194140;194141;194142;194143;194144;194145;194146;194147;194148;194149;194150;194151;194152;194153;194154;194155;194156;194157;194158;194159;194160;194161;194162;194163;194164;194165;194166;194167;194168;194169;194170;194171;194172;194173;194174;194175;194176;194177;194178;194179;194180;194181;194182 194142 1137 42 LGEMWNNTAADDKQPYEK Unmodified 2108.9473 0.94731909 883 P09429 HMGB1 High mobility group protein B1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 55.111 54.602 3 2.2008E-11 61931 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 89.468 80.989 66247000 0 0 11783000 0 4337100 0 7468200 8741700 0 0 19366000 0 0 0 14551000 29092 883 26586 244286;244287;244288;244289;244290;244291 194183;194184;194185;194186;194187;194188 194185 6 LGEMWNNTAADDKQPYEK Oxidation (M) 2124.9422 0.94223371 883 P09429 HMGB1 High mobility group protein B1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 45.29 45.274 3 0.00010075 50566 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 57.708 53.228 34640000 0 0 0 9296500 0 0 10906000 0 0 0 14438000 0 0 0 0 29093 883 26586 244292;244293;244294 194189 194189 1137 1 LGEMWSEQSAK Unmodified 1264.5758 0.57578728 1207 P26583 HMGB2 High mobility group protein B2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 49.549 48.153 2 3.6737E-09 58903 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 157.96 129.78 1172900000 20268000 911650000 19662000 9437900 9537000 15941000 7593600 8632600 5640300 0 36487000 27310000 11107000 20008000 69646000 29094 1207 26587 244295;244296;244297;244298;244299;244300;244301;244302;244303;244304;244305;244306;244307;244308;244309 194190;194191;194192;194193;194194;194195;194196;194197;194198;194199;194200;194201;194202;194203;194204;194205 194196 16 LGEMWSEQSAK Oxidation (M) 1280.5707 0.5707019 1207 P26583 HMGB2 High mobility group protein B2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 6 2 20 1 5 2 1 1 2 2 1 2 1 2 2 2 2 2 37.233 36.028 2 1.6961E-16 44635 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 166.19 145.86 542480000 10095000 372530000 14597000 3999900 4013800 13485000 7904400 2261600 10478000 4642700 23806000 21713000 12642000 11976000 28336000 29095 1207 26587 244310;244311;244312;244313;244314;244315;244316;244317;244318;244319;244320;244321;244322;244323;244324;244325;244326;244327;244328;244329;244330;244331;244332;244333;244334;244335;244336;244337 194206;194207;194208;194209;194210;194211;194212;194213;194214;194215;194216;194217 194206 1762 9 LGENMILK Oxidation (M) 932.5001 0.50010314 1483 P43897 TSFM Elongation factor Ts, mitochondrial yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 43.05 38.579 2 0.03098 50012 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.492 24.644 36213000 0 31602000 4610800 0 0 0 0 0 0 0 0 0 0 0 0 29096 1483 26588 244338;244339 194218 194218 1 LGENVANIYK Unmodified 1119.5924 0.59242362 5169 Q9Y3I1 FBXO7 F-box only protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 52.851 52.015 2 2.7191E-08 66707 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 154.28 106.54 248970000 0 123090000 0 6855700 7336400 14535000 9125900 9290300 8550400 16355000 0 0 10126000 14168000 29545000 29097 5169 26589 244340;244341;244342;244343;244344;244345;244346;244347;244348;244349;244350;244351;244352 194219;194220;194221;194222;194223;194224;194225;194226;194227;194228;194229;194230;194231 194222 12 LGEPSEIDQR Unmodified 1142.5568 0.5567664 2652 Q2M389 KIAA1033 WASH complex subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 2 1 1 7.0659 7.1865 2;3 0.018932 4989 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 35.511 17.702 70842000 0 0 0 5789200 4466200 289300 5633600 0 4033400 8129700 11804000 6440600 7033400 6441200 10782000 29098 2652 26590 244353;244354;244355;244356;244357;244358;244359;244360;244361;244362;244363;244364 194232;194233;194234 194234 3 LGEPSEIDQRDK Unmodified 1385.6787 0.67867245 2652 Q2M389 KIAA1033 WASH complex subunit 7 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 31.225 26.778 3 0.005308 35058 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.924 46.574 46332000 0 46332000 0 0 0 0 0 0 0 0 0 0 0 0 0 29099 2652 26591 244365;244366 194235;194236 194236 2 LGEQCEAVVR Unmodified 1159.5656 0.56555694 4668 Q9NVH2 INTS7 Integrator complex subunit 7 yes yes 0 0 0 By MS/MS 10 0 1 1 31.676 31.672 2 0.045161 34685 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 53.493 17.613 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29100 4668 26592 244367 194237 194237 1 LGEQCEAVVRFPR Unmodified 1559.7878 0.78784574 4668 Q9NVH2 INTS7 Integrator complex subunit 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 59.77 59.976 3 0.018248 68696 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 35.737 22.02 41273000 0 0 0 0 2400200 0 5366600 0 2963300 0 5852000 9918600 5660100 0 9111700 29101 4668 26593 244368;244369;244370;244371;244372;244373;244374 194238 194238 1 LGEQVFGTTGK Unmodified 1135.5873 0.58733824 4367 Q9H2H9 SLC38A1 Sodium-coupled neutral amino acid transporter 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 47.729 47.101 2 0.0004754 52196 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 84.054 72.694 99842000 0 38304000 0 0 0 5073100 4672600 4725400 3912800 6594300 5442300 8006000 5378400 6968400 10764000 29102 4367 26594 244375;244376;244377;244378;244379;244380;244381;244382;244383;244384;244385;244386;244387 194239;194240;194241;194242;194243;194244;194245;194246;194247;194248;194249;194250;194251 194249 13 LGEQYSCYGDGGK Unmodified 1432.5929 0.59289391 2777 Q5T5X7 BEND3 BEN domain-containing protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 34.749 34.331 2 0.0018446 42137 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.155 75.579 61545000 0 27626000 0 2122300 2416600 0 2445000 3205600 2655400 3969000 10849000 0 3842700 2413100 0 29103 2777 26595 244388;244389;244390;244391;244392;244393;244394;244395;244396;244397 194252;194253;194254;194255;194256;194257;194258;194259 194253 8 LGERDDTIPPEYR Unmodified 1559.758 0.7579854 1113 P20810 CAST Calpastatin yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 1 1 2 1 2 2 2 1 2 1 45.326 45.509 3 0.0023339 49933 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 43.798 37.365 191590000 0 0 0 9408400 11242000 8307300 15140000 8201700 0 24505000 28113000 28495000 10929000 14967000 32283000 29104 1113 26596 244398;244399;244400;244401;244402;244403;244404;244405;244406;244407;244408;244409;244410;244411;244412;244413 194260;194261;194262;194263;194264;194265;194266 194263 5 LGERDDTIPPEYRHLLDDNGQDK Unmodified 2695.2838 0.28378602 1113 P20810 CAST Calpastatin yes yes 0 0 2 By MS/MS 2 0 2 2 77.382 69.252 3;4 2.7315E-29 91175 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 109.64 89.92 143610000 143610000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29105 1113 26597 244414;244415 194267;194268 194267 1 LGESQTLQQFSR Unmodified 1392.6997 0.69974224 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 54.01 54.218 2 2.5772E-67 61241 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 197.06 139.46 213170000 0 0 0 11226000 0 25427000 0 9944300 9403200 17605000 27221000 32817000 16332000 17151000 46047000 29106 2344 26598 244416;244417;244418;244419;244420;244421;244422;244423;244424;244425;244426 194269;194270;194271;194272;194273;194274;194275;194276;194277;194278;194279;194280;194281 194274 13 LGESQTLQQFSRDVDEIEAWISEK Unmodified 2807.3614 0.36136764 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 102.46 96.036 3 5.4615E-31 121072 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.68 93.889 82886000 73903000 8983200 0 0 0 0 0 0 0 0 0 0 0 0 0 29107 2344 26599 244427;244428 194282;194283 194283 2 LGESVQDLSSFDEYSSELK Unmodified 2131.9797 0.97972465 4917 Q9UI12 ATP6V1H V-type proton ATPase subunit H yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 6.9 3.81 3 1 6 1 2 1 1 1 1 1 1 1 84.399 82.409 2 0 101634 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 313.53 297.4 639220000 8262500 602500000 3490100 0 0 5285000 2368400 3444900 0 0 0 0 0 3235700 10627000 29108 4917 26600 244429;244430;244431;244432;244433;244434;244435;244436;244437;244438 194284;194285;194286;194287;194288;194289;194290;194291 194286 8 LGETYKDHENIVIAK Unmodified 1728.9046 0.90464964 838 P07237 P4HB Protein disulfide-isomerase yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 51.062 45.103 4 0.0077656 56829 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 56.569 46.769 23813000 7629000 0 16184000 0 0 0 0 0 0 0 0 0 0 0 0 29109 838 26601 244439;244440 194292 194292 0 LGEVQQK Unmodified 800.43922 0.43921744 450 O60942 RNGTT mRNA-capping enzyme;Polynucleotide 5'-triphosphatase;mRNA guanylyltransferase yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 8.9559 6.2108 2 0.030692 9001 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.191 20.895 48138000 0 47533000 605240 0 0 0 0 0 0 0 0 0 0 0 0 29110 450 26602 244441;244442 194293 194293 1 LGEVVNTHGPVEPDK Unmodified 1589.8049 0.80493559 1280 P30419 NMT1 Glycylpeptide N-tetradecanoyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.66 6 1 15 2 3 2 1 1 1 1 1 1 1 2 1 1 2 2 43.547 41.814 2;3 6.7876E-27 45757 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 131.13 99.7 2019400000 56525000 1616200000 120520000 8147300 9097500 14005000 10538000 11453000 8109500 21468000 47945000 33006000 16248000 33091000 13040000 29111 1280 26603 244443;244444;244445;244446;244447;244448;244449;244450;244451;244452;244453;244454;244455;244456;244457;244458;244459;244460;244461;244462;244463;244464 194294;194295;194296;194297;194298;194299;194300;194301;194302;194303;194304;194305;194306;194307;194308;194309;194310;194311;194312;194313;194314;194315;194316 194299 23 LGEWNEK Unmodified 874.41848 0.418482 325 O43399 TPD52L2 Tumor protein D54 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 29.549 28.54 2 0.03062 35084 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 92.467 63.938 959390000 9658800 154640000 6898900 37643000 47978000 48173000 45146000 79922000 38168000 83797000 90837000 91710000 65344000 62336000 97140000 29112 325 26604 244465;244466;244467;244468;244469;244470;244471;244472;244473;244474;244475;244476;244477;244478;244479;244480 194317;194318;194319;194320;194321;194322;194323;194324 194317 5 LGEWVGLCK Unmodified 1060.5376 0.53755128 1188 P25398 RPS12 40S ribosomal protein S12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 68.349 67.082 2 0.0065007 82918 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 130.27 110.64 209700000 126180000 0 27095000 0 0 2942000 0 0 0 0 8392000 11552000 7412200 8796200 17327000 29113 1188 26605 244481;244482;244483;244484;244485;244486;244487;244488 194325;194326;194327;194328;194329;194330;194331 194328 6 LGEYEDVSR Unmodified 1066.4931 0.49310351 4006 Q99426 TBCB Tubulin-folding cofactor B yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 30.497 30.852 2 0.0099322 33608 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 65.305 27.067 8225500 0 0 0 0 0 4232700 0 0 0 0 0 3992700 0 0 0 29114 4006 26606 244489;244490 194332 194332 1 LGEYEDVSRVEK Unmodified 1422.6991 0.69907354 4006 Q99426 TBCB Tubulin-folding cofactor B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.868 39.049 3 0.00032182 43299 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 68.676 59.626 172760000 0 0 0 9902200 5171300 14216000 10108000 7005400 5603600 18435000 24866000 23932000 9636800 15343000 28539000 29115 4006 26607 244491;244492;244493;244494;244495;244496;244497;244498;244499;244500;244501;244502 194333;194334;194335;194336;194337;194338;194339;194340;194341;194342;194343;194344 194336 12 LGEYGFQNALIVR Unmodified 1478.7882 0.78816332 65 CON__P02769 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.003 82.064 2 1.8609E-25 94664 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 161.76 135.72 + 833790000 0 0 0 36795000 77973000 54328000 38110000 60711000 52524000 158450000 94164000 84804000 25683000 41288000 108960000 29116 65 26608 244503;244504;244505;244506;244507;244508;244509;244510;244511;244512;244513;244514 194345;194346;194347;194348;194349;194350;194351;194352;194353;194354;194355;194356;194357;194358;194359 194351 13 LGEYMEK Unmodified 868.40005 0.40005474 4003 Q96TA1 FAM129B Niban-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 29.307 24.917 2 0.031783 32857 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.029 32.003 457650000 16699000 434620000 6336400 0 0 0 0 0 0 0 0 0 0 0 0 29117 4003 26609 244515;244516;244517 194360 194360 1 LGFAGLVQEISFGTTK Unmodified 1666.893 0.89302232 1548 P48643 CCT5 T-complex protein 1 subunit epsilon yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.17 3.85 2 1 3 1 2 1 1 1 96.889 94.27 2 4.5339E-57 116945 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 171.49 149.5 41520000 22327000 12225000 0 0 0 0 0 0 0 1903600 1023200 0 0 0 4042000 29118 1548 26610 244518;244519;244520;244521;244522;244523 194361;194362;194363;194364;194365 194364 5 LGFATSSDVIEMK Unmodified 1396.6908 0.69081704 1451 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.607 76.716 2 0.010037 88080 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.577 37.728 62399000 0 0 0 0 2184900 3990100 3199900 2943800 3201000 5704700 6604700 7904600 5200900 7909500 13555000 29119 1451 26611 244524;244525;244526;244527;244528;244529;244530;244531;244532;244533;244534 194366;194367;194368;194369 194367 4 LGFATSSDVIEMK Oxidation (M) 1412.6857 0.68573166 1451 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes yes 0 1 0 By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 2 1 2 2 65.281 65.437 2 0.0021858 74910 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 54.343 33.473 51860000 0 0 0 0 3922300 5411000 4410200 0 3016100 5835500 6020500 7017500 4253200 5022800 6950500 29120 1451 26611 244535;244536;244537;244538;244539;244540;244541;244542;244543;244544;244545;244546;244547 194370;194371;194372;194373;194374;194375;194376 194375 2286 5 LGFDVVFNYK Unmodified 1200.6179 0.61791009 2454 Q14914 PTGR1 Prostaglandin reductase 1 yes yes 0 0 0 By MS/MS 2 0 1 1 92.479 84.349 2 0.043214 109357 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.775 33.445 5240300 5240300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29121 2454 26612 244548 194377 194377 1 LGFEEFK Unmodified 868.43307 0.43306943 784;3914 P04632;Q96L46 CAPNS1;CAPNS2 Calpain small subunit 1;Calpain small subunit 2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.53 2.94 1 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63.376 62.553 2 0.023406 71264 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 86.866 49.221 2515700000 1598800 72891000 347580000 144080000 117070000 135970000 183320000 219140000 117330000 164330000 206870000 184890000 166480000 150900000 303290000 29122 784;3914 26613 244549;244550;244551;244552;244553;244554;244555;244556;244557;244558;244559;244560;244561;244562;244563 194378;194379;194380;194381 194378 4 LGFESIYK Unmodified 955.50148 0.50148335 1583 P49643 PRIM2 DNA primase large subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 1 68.514 67.186 2 0.012096 86026 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.45 59.149 481100000 99595000 181770000 66696000 0 6459500 12237000 8637300 8511900 6828300 11911000 14012000 15527000 11588000 11947000 25378000 29123 1583 26614 244564;244565;244566;244567;244568;244569;244570;244571;244572;244573;244574;244575;244576;244577;244578 194382;194383;194384;194385;194386 194384 5 LGFGDLTSGK Unmodified 993.51311 0.51311067 2682 Q49B96 COX19 Cytochrome c oxidase assembly protein COX19 yes yes 0 0 0 By MS/MS 2 0 1 1 70.166 64.297 2 0.0036037 82084 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.701 50.866 29930000 0 29930000 0 0 0 0 0 0 0 0 0 0 0 0 0 29124 2682 26615 244579 194387;194388 194388 2 LGFLYDLDK Unmodified 1082.5648 0.56481189 3008 Q6ZS17 FAM65A Protein FAM65A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 82.156 82.124 2 0.011592 94200 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 62.582 41.883 10524000 0 0 0 2367800 0 0 0 0 0 0 0 0 0 2856600 5299500 29125 3008 26616 244580;244581;244582 194389;194390 194390 2 LGFSLTPSK Unmodified 948.52803 0.52803245 1397 P38432 COIL Coilin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 65.784 65.64 2 0.028589 75114 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 82.426 64.578 37299000 0 0 0 5324100 6945400 0 8704000 8805600 7520100 0 0 0 0 0 0 29126 1397 26617 244583;244584;244585;244586;244587 194391 194391 0 LGFSSPYEGVLNK Unmodified 1409.7191 0.7190807 2295 Q13459 MYO9B Unconventional myosin-IXb yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 77.207 76.637 2 0.00086786 88292 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.01 57.417 145930000 50630000 0 0 3848800 4872200 8019800 6595900 6937200 5762400 9686000 8687300 10325000 7978200 8723600 13866000 29127 2295 26618 244588;244589;244590;244591;244592;244593;244594;244595;244596;244597;244598;244599;244600 194392;194393;194394;194395;194396 194393 5 LGFSSSPTK Unmodified 922.476 0.47599688 3226 Q8IVF2 AHNAK2 Protein AHNAK2 yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 37.809 32.07 2 0.016812 44714 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.596 31.681 37185000 18096000 19089000 0 0 0 0 0 0 0 0 0 0 0 0 0 29128 3226 26619 244601;244602 194397 194397 1 LGFTDVNK Unmodified 892.46543 0.46543219 3620 Q92544 TM9SF4 Transmembrane 9 superfamily member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 42.73 42.795 2 0.041524 46520 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.933 5.5129 63369000 0 0 0 8326000 5225500 0 9089900 6986800 0 8844500 0 0 9018400 0 15877000 29129 3620 26620 244603;244604;244605;244606;244607;244608;244609 194398;194399 194398 2 LGFTQGDVGLAMGK Oxidation (M) 1408.7021 0.70205043 1007 P14859;Q9UKI9;P09086 POU2F1;POU2F3;POU2F2 POU domain, class 2, transcription factor 1;POU domain, class 2, transcription factor 3;POU domain, class 2, transcription factor 2 yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 66.224 66.301 2 1.3765E-85 76381 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 193.96 167.92 346800000 0 0 0 21135000 23862000 21927000 32760000 35496000 0 30434000 31689000 44986000 40914000 28062000 35538000 29130 1007 26621 244610;244611;244612;244613;244614;244615;244616;244617;244618;244619;244620 194400;194401;194402;194403;194404;194405;194406;194407;194408;194409;194410;194411;194412;194413;194414 194410 1379 15 LGFTQGDVGLAMGK Unmodified 1392.7071 0.7071358 1007 P14859;Q9UKI9;P09086 POU2F1;POU2F3;POU2F2 POU domain, class 2, transcription factor 1;POU domain, class 2, transcription factor 3;POU domain, class 2, transcription factor 2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 77.357 76.786 2 2.0208E-26 88876 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 153.12 132.82 390550000 0 126450000 0 8989100 14097000 16749000 17337000 31635000 14328000 0 27386000 29217000 22830000 25061000 56471000 29131 1007 26621 244621;244622;244623;244624;244625;244626;244627;244628;244629;244630;244631;244632;244633;244634 194415;194416;194417;194418;194419;194420;194421;194422;194423;194424;194425;194426;194427 194427 13 LGFTQSQIDEIDHDYERDGLK Unmodified 2478.1663 0.16629665 2313 Q13546 RIPK1 Receptor-interacting serine/threonine-protein kinase 1 yes yes 0 0 1 By MS/MS 2 0 1 1 82.944 74.813 4 0.0063169 97841 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 35.421 27.524 23778000 23778000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29132 2313 26622 244635 194428 194428 1 LGGAGMER Unmodified 789.38032 0.38032236 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 14.548 14.712 2 0.0059094 14263 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 105.04 60.429 917920000 0 0 0 0 73795000 790420 73291000 85332000 64061000 122990000 144410000 94233000 129490000 129520000 0 29133 1681 26623 244636;244637;244638;244639;244640;244641;244642;244643;244644;244645 194429;194430;194431;194432;194433;194434 194432 4 LGGAGMER Oxidation (M) 805.37524 0.37523698 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 6.4658 6.583 2 0.004459 3387 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 97.798 33.022 343670000 0 0 0 17815000 26276000 28399000 34408000 28226000 31980000 0 43459000 0 49570000 40216000 43322000 29134 1681 26623 244646;244647;244648;244649;244650;244651;244652;244653;244654;244655 194435;194436;194437;194438;194439;194440 194438 2698 6 LGGAVLSFSEATSSVQK Unmodified 1679.873 0.87301516 1224 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.819 76.928 2 0.00043058 88360 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.279 70.016 47587000 0 0 0 0 2083500 2928000 2677600 4346800 2180300 4124200 5487800 6792700 2248000 3061300 11657000 29135 1224 26624 244656;244657;244658;244659;244660;244661;244662;244663;244664;244665;244666 194441;194442;194443;194444;194445;194446;194447;194448;194449 194444 9 LGGAVPFAPPEVSPEQAK Unmodified 1792.9359 0.93594977 3011 Q6ZSR9 Uncharacterized protein FLJ45252 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 79.414 78.89 2 9.1111E-06 91270 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 75.479 51.729 415040000 0 250950000 0 8264800 8530800 13387000 13392000 12873000 9415100 15862000 13911000 18145000 11917000 16420000 21970000 29136 3011 26625 244667;244668;244669;244670;244671;244672;244673;244674;244675;244676;244677;244678;244679;244680 194450;194451;194452;194453;194454;194455;194456;194457;194458;194459;194460;194461;194462;194463;194464 194451 15 LGGFDNIESGAVWK Unmodified 1491.7358 0.73579339 2688 Q4LE39 ARID4B AT-rich interactive domain-containing protein 4B yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS 8.4 3.2 1 4 1 1 1 1 1 80.632 80.251 2 0.0026755 92572 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.408 50.289 21189000 0 0 1791100 0 0 0 2718300 0 0 0 0 0 3357200 2685500 10637000 29137 2688 26626 244681;244682;244683;244684;244685 194465;194466 194465 2 LGGGLGGTR Unmodified 786.4348 0.43480077 868 P08621 SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.784 19.985 2 0.0051376 19226 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 82.452 0.66861 245350000 0 0 0 15536000 17418000 13314000 19076000 16025000 12267000 25216000 27883000 30100000 19003000 18611000 30905000 29138 868 26627 244686;244687;244688;244689;244690;244691;244692;244693;244694;244695;244696;244697 194467;194468;194469;194470 194468 3 LGGGLGVAGGNSTR Unmodified 1214.6367 0.63674805 4555 Q9NPJ6 MED4 Mediator of RNA polymerase II transcription subunit 4 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 35.63 35.956 2 0.004364 39639 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 45.829 15.662 44322000 0 0 0 0 0 3226800 3769400 2612500 2292600 0 6295900 7450200 4298200 5516500 8860100 29139 4555 26628 244698;244699;244700;244701;244702;244703;244704;244705;244706;244707 194471;194472;194473;194474 194473 4 LGGHGPSFPLK Unmodified 1108.6029 0.60292873 974 P13010 XRCC5 X-ray repair cross-complementing protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.117 49.274 2 1.3823E-05 55574 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 136.21 108.33 463740000 0 0 0 17174000 10088000 26777000 21830000 21425000 27966000 28739000 43852000 75790000 41266000 40258000 108580000 29140 974 26629 244708;244709;244710;244711;244712;244713;244714;244715;244716;244717;244718;244719 194475;194476;194477;194478;194479;194480;194481;194482;194483;194484;194485;194486;194487;194488;194489;194490;194491 194475 17 LGGIGQFLAK Unmodified 1002.5862 0.58621603 2152 Q08211 DHX9 ATP-dependent RNA helicase A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.898 75.961 2 0.0033605 87215 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 76.774 56.075 278550000 0 0 0 18276000 16948000 29279000 15827000 16233000 15367000 24923000 23214000 24704000 31508000 22508000 39757000 29141 2152 26630 244720;244721;244722;244723;244724;244725;244726;244727;244728;244729;244730;244731 194492;194493;194494;194495;194496;194497;194498;194499;194500;194501 194496 8 LGGIPVGVVAVETR Unmodified 1365.798 0.79799972 2231 Q13085 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.222 80.281 2 0.0017427 93008 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.452 39.199 248730000 0 0 0 8655600 13356000 24493000 13977000 12307000 13322000 29125000 25983000 33126000 16958000 18849000 38576000 29142 2231 26631 244732;244733;244734;244735;244736;244737;244738;244739;244740;244741;244742;244743 194502;194503;194504;194505;194506;194507;194508;194509;194510;194511;194512;194513 194511 12 LGGISSTEEMDLK Unmodified 1378.665 0.66499622 463 O75150 RNF40 E3 ubiquitin-protein ligase BRE1B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.435 60.54 2 7.1206E-08 68714 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 120.06 78.186 148380000 0 0 0 5828600 6896600 11088000 9965300 10330000 8126100 12544000 16201000 18964000 11054000 12999000 24384000 29143 463 26632 244744;244745;244746;244747;244748;244749;244750;244751;244752;244753;244754;244755 194514;194515;194516;194517;194518;194519;194520;194521;194522;194523;194524;194525 194518 12 LGGLQVLR Unmodified 854.53379 0.53378653 4344 Q9H173 SIL1 Nucleotide exchange factor SIL1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.67 59.78 2 0.023374 67453 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.39 22.781 72373000 0 0 0 3772200 3414800 6347900 5786600 4816200 3252500 6743800 7243900 6782500 5017500 6661000 12534000 29144 4344 26633 244756;244757;244758;244759;244760;244761;244762;244763;244764;244765;244766;244767 194526;194527 194527 2 LGGLRPESPESLTSVSR Unmodified 1783.9428 0.94282606 4416 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 61.805 61.749 3 0.034598 69721 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 25.611 14.977 24429000 0 0 0 1987100 3384300 0 2696200 4632800 0 4858800 0 0 3341000 3528400 0 29145 4416 26634 244768;244769;244770;244771;244772;244773;244774 194528 194528 1 LGGLTQAPGNPVLAVQINQDK Unmodified 2132.159 0.15896684 1202 P26368 U2AF2 Splicing factor U2AF 65 kDa subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.569 81.63 3 1.9927E-79 94321 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 163.79 153.54 1394600000 0 0 0 23648000 96517000 113160000 67078000 83834000 105400000 217420000 145560000 146130000 78903000 115870000 201100000 29146 1202 26635 244775;244776;244777;244778;244779;244780;244781;244782;244783;244784;244785;244786 194529;194530;194531;194532;194533;194534;194535;194536;194537;194538;194539;194540;194541;194542;194543;194544;194545 194534 17 LGGLVIEK Unmodified 827.51165 0.5116541 3621 Q92547 TOPBP1 DNA topoisomerase 2-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 2 51.333 51.371 2 0.010501 57800 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 79.451 36.537 105920000 0 0 0 9214000 7975700 10774000 10009000 9124400 8481200 11763000 12734000 0 13422000 12424000 0 29147 3621 26636 244787;244788;244789;244790;244791;244792;244793;244794;244795;244796;244797;244798 194546;194547;194548;194549;194550;194551;194552;194553;194554;194555 194550 10 LGGNEIVSFLK Unmodified 1175.655 0.65502388 429 O60762 DPM1 Dolichol-phosphate mannosyltransferase subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 82.916 82.952 2 0.00059844 96366 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 79.986 54.848 43425000 0 0 0 1182500 3180700 4086900 2495400 4169200 3215900 5289500 0 6586400 7236900 5981900 0 29148 429 26637 244799;244800;244801;244802;244803;244804;244805;244806;244807;244808;244809;244810 194556;194557;194558;194559;194560;194561;194562;194563;194564 194562 9 LGGNPGTNSR Unmodified 971.47846 0.4784565 3714 Q969G3 SMARCE1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.7908 7.9177 2 0.0021885 5813 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 85.744 67.013 195520000 0 0 0 7639600 7042500 8169000 10273000 11591000 10814000 22724000 31016000 25797000 17012000 20167000 23275000 29149 3714 26638 244811;244812;244813;244814;244815;244816;244817;244818;244819;244820;244821;244822 194565;194566;194567;194568;194569;194570;194571;194572 194567 7 LGGNVVVSLEGK Unmodified 1170.6608 0.66083754 5088 Q9Y281 CFL2 Cofilin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 1 4 2 70.857 65.525 2 1.1976E-22 83542 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 200.71 156.36 428880000 51452000 363910000 13514000 0 0 0 0 0 0 0 0 0 0 0 0 29150 5088 26639 244823;244824;244825;244826;244827;244828;244829 194573;194574;194575;194576;194577;194578;194579;194580;194581 194575 9 LGGNVVVSLEGKPL Unmodified 1380.7977 0.79766537 5088 Q9Y281 CFL2 Cofilin-2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 84.836 79.714 2 0.020909 101959 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.293 47.935 309730000 80851000 221030000 7853700 0 0 0 0 0 0 0 0 0 0 0 0 29151 5088 26640 244830;244831;244832 194582;194583 194583 1 LGGSAVISLEGK Unmodified 1129.6343 0.63428844 1165 P23528 CFL1 Cofilin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2.71 2.15 1 94 11 9 33 45 28 1 1 1 1 1 1 1 1 1 83.481 79.43 1;2 3.8696E-37 60283 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 198.25 147.19 12912000000 1570700000 10420000000 735960000 0 0 8052700 2731700 0 5323600 8900800 27669000 20116000 5134100 20887000 86247000 29152 1165 26641 244833;244834;244835;244836;244837;244838;244839;244840;244841;244842;244843;244844;244845;244846;244847;244848;244849;244850;244851;244852;244853;244854;244855;244856;244857;244858;244859;244860;244861;244862;244863;244864;244865;244866;244867;244868;244869;244870;244871;244872;244873;244874;244875;244876;244877;244878;244879;244880;244881;244882;244883;244884;244885;244886;244887;244888;244889;244890;244891;244892;244893;244894;244895;244896;244897;244898;244899;244900;244901;244902;244903;244904;244905;244906;244907;244908;244909;244910;244911;244912;244913;244914;244915;244916;244917;244918;244919;244920;244921;244922;244923;244924;244925;244926;244927;244928;244929;244930;244931;244932;244933;244934;244935;244936;244937;244938;244939;244940;244941;244942;244943;244944;244945;244946;244947 194584;194585;194586;194587;194588;194589;194590;194591;194592;194593;194594;194595;194596;194597;194598;194599;194600;194601;194602;194603;194604;194605;194606;194607;194608;194609;194610;194611;194612;194613;194614;194615;194616;194617;194618;194619;194620;194621;194622;194623;194624;194625;194626;194627;194628;194629;194630;194631;194632;194633;194634;194635;194636;194637;194638;194639;194640;194641;194642;194643;194644;194645;194646;194647;194648;194649;194650;194651;194652;194653;194654;194655;194656;194657;194658;194659;194660;194661;194662;194663;194664;194665;194666;194667;194668;194669;194670;194671;194672;194673;194674;194675;194676;194677;194678;194679;194680;194681;194682;194683;194684;194685;194686;194687;194688;194689;194690;194691;194692;194693;194694;194695;194696;194697;194698;194699;194700;194701;194702;194703;194704;194705;194706;194707;194708;194709;194710;194711;194712;194713;194714;194715;194716;194717;194718;194719;194720;194721;194722;194723;194724;194725;194726;194727;194728;194729;194730;194731;194732;194733;194734;194735;194736;194737;194738;194739;194740;194741;194742;194743;194744;194745;194746;194747;194748;194749;194750;194751;194752;194753;194754;194755;194756;194757;194758;194759;194760;194761;194762;194763;194764 194642 173 LGGSAVISLEGKPL Unmodified 1339.7711 0.77111627 1165 P23528 CFL1 Cofilin-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3.22 2.82 1 31 3 6 14 13 8 1 1 1 1 1 1 89.225 85.583 2;3 6.9055E-23 94815 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 166.29 147.05 19699000000 5124200000 13626000000 836260000 0 0 0 3614100 0 0 7719900 19611000 15085000 0 13418000 53157000 29153 1165 26642 244948;244949;244950;244951;244952;244953;244954;244955;244956;244957;244958;244959;244960;244961;244962;244963;244964;244965;244966;244967;244968;244969;244970;244971;244972;244973;244974;244975;244976;244977;244978;244979;244980;244981;244982;244983;244984;244985;244986;244987;244988 194765;194766;194767;194768;194769;194770;194771;194772;194773;194774;194775;194776;194777;194778;194779;194780;194781;194782;194783;194784;194785;194786;194787;194788;194789;194790;194791;194792;194793;194794;194795;194796;194797;194798;194799;194800;194801;194802;194803;194804;194805;194806;194807;194808;194809;194810;194811;194812;194813;194814 194782 37 LGGSLADSYLDEGFLLDK Unmodified 1911.9466 0.94657403 1980 P78371 CCT2 T-complex protein 1 subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.4 3.68 4 1 10 1 3 1 1 1 1 1 1 1 1 1 1 1 92.644 91.136 2 0 114347 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 292.8 279.6 3141100000 893160000 2153900000 49913000 1125300 0 1716000 889770 1305900 2177000 10101000 6220100 2145400 0 2132500 16286000 29154 1980 26643 244989;244990;244991;244992;244993;244994;244995;244996;244997;244998;244999;245000;245001;245002;245003 194815;194816;194817;194818;194819;194820;194821;194822;194823;194824;194825;194826;194827;194828;194829;194830;194831;194832;194833 194820 19 LGGSLADSYLDEGFLLDKK Unmodified 2040.0415 0.041537049 1980 P78371 CCT2 T-complex protein 1 subunit beta yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 91.855 86.437 3 4.39E-06 109124 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.358 65.778 66943000 35333000 31610000 0 0 0 0 0 0 0 0 0 0 0 0 0 29155 1980 26644 245004;245005;245006 194834;194835;194836 194834 3 LGGSLIVAFEGCPV Unmodified 1417.7275 0.72753689 1822 P60981 DSTN Destrin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 3 2 1 97.753 92.704 2 0.0021107 115612 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.016 54.834 298490000 154020000 136790000 7682200 0 0 0 0 0 0 0 0 0 0 0 0 29156 1822 26645 245007;245008;245009;245010;245011;245012 194837;194838;194839;194840;194841;194842;194843;194844;194845;194846 194837 10 LGGSPFGPAGTGK Unmodified 1144.5877 0.58767259 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.124 46.292 2 1.0928E-12 51487 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 157.38 114.78 481540000 0 0 0 31777000 26406000 41258000 28915000 60451000 22978000 43425000 41822000 51517000 31867000 47010000 54115000 29157 2392 26646 245013;245014;245015;245016;245017;245018;245019;245020;245021;245022;245023;245024 194847;194848;194849;194850;194851;194852;194853;194854;194855;194856;194857 194855 11 LGGSPTSLGTWGSWIGPDHDK Unmodified 2167.0334 0.033431979 996 P14314 PRKCSH Glucosidase 2 subunit beta yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 6 4 2 2 1 1 1 1 86.748 83.552 3 8.5828E-05 96841 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.982 43.341 74317000 27982000 19677000 0 0 0 1777500 0 0 0 0 0 0 0 0 24881000 29158 996 26647 245025;245026;245027;245028 194858;194859;194860 194859 2 LGGSQEDQIK Unmodified 1073.5353 0.53530267 1392 P37837 TALDO1 Transaldolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.24 2 1 10 1 2 1 1 1 1 1 1 1 1 1 1 19.545 18.754 2 6.7455E-12 19095 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 176.6 130.59 3949200000 177170000 3531300000 0 20159000 0 3094400 3065700 4670900 1404700 5271100 31029000 25576000 0 20437000 126010000 29159 1392 26648 245029;245030;245031;245032;245033;245034;245035;245036;245037;245038;245039;245040;245041 194861;194862;194863;194864;194865;194866;194867;194868;194869;194870;194871 194867 5 LGGTCVNVGCVPK Unmodified 1359.6639 0.66389078 724 P00390 GSR Glutathione reductase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 55.787 50.925 2 1.1563E-33 65945 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 204.34 184.55 149700000 0 147550000 2154400 0 0 0 0 0 0 0 0 0 0 0 0 29160 724 26649 245042;245043;245044 194872;194873 194872 2 LGGTIDDCELVEGLVLTQK Unmodified 2059.0507 0.050721527 1642 P50991 CCT4 T-complex protein 1 subunit delta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.88 3.83 9 5 12 4 7 3 1 2 1 1 2 2 1 2 92.797 90.549 2;3 8.6357E-91 109685 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 182.15 157.87 1599800000 254100000 1176300000 136460000 0 1365300 2491100 0 515590 623170 9924000 5741900 0 0 1549000 10716000 29161 1642 26650 245045;245046;245047;245048;245049;245050;245051;245052;245053;245054;245055;245056;245057;245058;245059;245060;245061;245062;245063;245064;245065;245066;245067;245068;245069;245070 194874;194875;194876;194877;194878;194879;194880;194881;194882;194883;194884;194885;194886;194887;194888;194889;194890;194891;194892;194893;194894;194895 194895 19 LGGTPPADGK Unmodified 911.47125 0.47124585 3768 Q96C00 ZBTB9 Zinc finger and BTB domain-containing protein 9 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 13.803 13.948 2 0.035123 13489 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 69.628 40.29 34972000 0 0 0 3127400 4468300 3940100 0 0 2603600 4815300 5551700 6188900 0 4276500 0 29162 3768 26651 245071;245072;245073;245074;245075;245076;245077;245078 194896;194897 194896 1 LGGVSSTEELDIR Unmodified 1374.6991 0.69907354 2816 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 61.669 61.993 2 1.7551E-08 70614 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 113.47 89.129 115130000 0 0 0 0 0 0 0 0 0 18732000 20899000 17478000 15025000 14162000 28837000 29163 2816 26652 245079;245080;245081;245082;245083;245084 194898;194899;194900;194901;194902;194903 194900 6 LGGVSSTEELDIRTLQTK Unmodified 1946.032 0.032034995 2816 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 76.32 71.477 3 1.5173E-28 87798 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 126.63 115.59 104510000 17181000 53445000 33885000 0 0 0 0 0 0 0 0 0 0 0 0 29164 2816 26653 245085;245086;245087;245088 194904;194905;194906;194907 194907 4 LGHAETDEQLQNIISK Unmodified 1794.9112 0.91119158 2828 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 62.956 62.145 2;3 0.00040441 71604 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 60.549 54.769 258290000 0 64678000 21032000 5240400 4773800 19609000 8902700 8207900 10093000 19644000 13119000 22633000 12804000 11457000 36093000 29165 2828 26654 245089;245090;245091;245092;245093;245094;245095;245096;245097;245098;245099;245100;245101;245102;245103 194908;194909;194910;194911;194912;194913;194914;194915;194916;194917;194918 194917 10 LGHASDRIIALDGDTK Unmodified 1680.8795 0.87949752 1249 P29401 TKT Transketolase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 4.31 3.48 1 13 5 7 11 6 2 1 1 1 1 1 2 56.852 52.706 3;4 1.0015E-42 95560 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 152.32 126.19 4694400000 3349900000 672760000 37205000 0 0 0 0 8015700 0 0 33935000 64571000 11088000 43343000 473550000 29166 1249 26655 245104;245105;245106;245107;245108;245109;245110;245111;245112;245113;245114;245115;245116;245117;245118;245119;245120;245121;245122;245123;245124;245125;245126;245127;245128;245129 194919;194920;194921;194922;194923;194924;194925;194926;194927;194928;194929;194930;194931;194932;194933;194934;194935;194936;194937;194938;194939;194940;194941;194942;194943;194944;194945;194946;194947 194931 19 LGHCSSACPSDSVSQTNIQNLK Unmodified 2402.0955 0.095456663 2687 Q4L235 AASDH Acyl-CoA synthetase family member 4 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 54.407 48.372 3 9.1031E-07 65783 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.226 41.062 12072000 9861800 0 2209900 0 0 0 0 0 0 0 0 0 0 0 0 29167 2687 26656 245130;245131 194948;194949 194948 2 LGHELQQAGLK Unmodified 1192.6564 0.65642086 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 1 1 1 2 1 1 2 33.238 33.5 2;3 0.0069935 36588 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 48.981 23.544 135960000 0 0 0 6652000 7006900 12335000 6040600 6411100 4396700 10544000 13076000 20514000 12008000 17231000 19751000 29168 2459 26657 245132;245133;245134;245135;245136;245137;245138;245139;245140;245141;245142;245143;245144;245145 194950;194951;194952;194953;194954;194955;194956 194951 6 LGHGEEELETEK Unmodified 1369.6361 0.63613893 393 O60306 AQR Intron-binding protein aquarius yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.575 22.781 3 0.0063669 23275 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 63.473 49.664 119620000 0 0 0 7357600 6351200 9354300 6991100 9449600 5000200 8930500 11730000 17387000 10815000 13926000 12329000 29169 393 26658 245146;245147;245148;245149;245150;245151;245152;245153;245154;245155;245156;245157 194957;194958;194959;194960;194961;194962;194963;194964 194960 2 LGHGLLSGEYSK Unmodified 1259.651 0.65100113 1488 P45974 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.2 3.92 3 2 1 1 1 1 1 49.173 45.761 2;3 0.00029092 64997 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 139.15 116.11 71577000 31963000 11346000 8070500 0 0 6069600 0 0 0 0 0 0 0 0 14128000 29170 1488 26659 245158;245159;245160;245161;245162 194965;194966;194967;194968 194967 1 LGHGLLSGEYSKPVPESGDGERVPEQK Unmodified 2864.4305 0.43045026 1488 P45974 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes yes 0 0 2 By MS/MS 10 0 1 1 54.663 55.303 4 1.4688E-20 61970 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.213 58.78 10911000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10911000 29171 1488 26660 245163 194969;194970 194970 2 LGHGVNNAAGQVGK Unmodified 1320.6898 0.68984625 2981 Q6UWP8 SBSN Suprabasin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 1 2 2 1 2 2 2 2 2 2 16.709 16.899 2;3 1.6818E-13 17439 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 125.48 112.52 192160000 0 0 0 41253000 12200000 11599000 12490000 22367000 4888700 7295500 16556000 29064000 14908000 9108600 10425000 29172 2981 26661 245164;245165;245166;245167;245168;245169;245170;245171;245172;245173;245174;245175;245176;245177;245178;245179;245180;245181;245182;245183;245184;245185 194971;194972;194973;194974;194975;194976;194977;194978;194979;194980 194978 5 LGHPDTLNQGEFK Unmodified 1454.7154 0.7153923 824 P06702 S100A9 Protein S100-A9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.74 2.87 4 1 26 2 2 1 2 2 2 3 3 2 2 2 2 2 2 2 41.566 41 2;3 7.4862E-16 45191 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 148.78 122.85 10649000000 25378000 197210000 160790000 5355500000 393930000 418400000 413650000 516920000 200080000 569730000 757490000 545170000 471090000 344160000 279400000 29173 824 26662 245186;245187;245188;245189;245190;245191;245192;245193;245194;245195;245196;245197;245198;245199;245200;245201;245202;245203;245204;245205;245206;245207;245208;245209;245210;245211;245212;245213;245214;245215;245216 194981;194982;194983;194984;194985;194986;194987;194988;194989;194990;194991;194992;194993;194994;194995;194996;194997;194998;194999;195000;195001;195002;195003;195004;195005;195006;195007;195008;195009;195010;195011;195012 194994 23 LGHPEALSAGTGSPQPPSFTYAQQR Unmodified 2596.267 0.26701374 2595 Q15942 ZYX Zyxin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 69.381 68.829 3 1.209E-75 78511 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 123.14 118.72 351620000 8395500 0 0 10444000 11690000 16935000 15796000 17066000 16966000 37751000 39800000 44299000 17635000 40812000 74033000 29174 2595 26663 245217;245218;245219;245220;245221;245222;245223;245224;245225;245226;245227;245228;245229 195013;195014;195015;195016;195017;195018;195019;195020;195021;195022;195023;195024;195025;195026;195027;195028;195029;195030;195031 195019 19 LGHPEALSAGTGSPQPPSFTYAQQREK Unmodified 2853.4046 0.40456986 2595 Q15942 ZYX Zyxin yes yes 0 0 1 By MS/MS 2 0 2 2 72.464 64.226 3;4 2.0289E-29 85221 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 91.643 72.53 73738000 73738000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29175 2595 26664 245230;245231 195032;195033;195034;195035 195034 4 LGHSFSLVGNK Unmodified 1157.6193 0.61930707 1663 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 1 2 2 2 2 46.341 46.496 2;3 0.00011252 52249 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 156.18 97.197 1088200000 0 0 0 57368000 55681000 103930000 73839000 91573000 81613000 123250000 22470000 144010000 104830000 74672000 154970000 29176 1663 26665 245232;245233;245234;245235;245236;245237;245238;245239;245240;245241;245242;245243;245244;245245;245246;245247;245248;245249;245250;245251;245252;245253;245254 195036;195037;195038;195039;195040;195041;195042;195043;195044;195045;195046;195047;195048;195049;195050;195051;195052 195039 6 LGHTDILVGVK Unmodified 1150.671 0.67100829 2478 Q15024 EXOSC7 Exosome complex component RRP42 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 4.29 3.61 5 2 2 1 2 2 59.133 55.036 2;3 3.6162E-09 68855 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 160.59 124.71 258540000 162050000 16272000 51869000 0 0 0 0 0 0 0 0 0 0 0 28343000 29177 2478 26666 245255;245256;245257;245258;245259;245260;245261 195053;195054;195055;195056;195057;195058;195059 195058 4 LGHVVMGNNAVSPYQQVIEK Unmodified 2182.1205 0.12047285 1809 P60228 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 71.459 70.127 3 4.1069E-83 91145 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 113.88 104.19 698520000 462680000 81457000 7842000 2404800 3798300 8088800 3994600 11181000 5348200 9855900 13084000 13407000 9617800 14953000 50804000 29178 1809 26667 245262;245263;245264;245265;245266;245267;245268;245269;245270;245271;245272;245273;245274;245275;245276;245277;245278 195060;195061;195062;195063;195064;195065;195066;195067;195068;195069;195070;195071;195072;195073;195074;195075;195076;195077;195078;195079;195080 195067 21 LGHVVMGNNAVSPYQQVIEK Oxidation (M) 2198.1154 0.11538747 1809 P60228 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 62.396 61.583 3 1.4868E-09 69935 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 69.333 63.519 417600000 194230000 0 0 0 0 0 21908000 26161000 0 39289000 35428000 0 31645000 29927000 39009000 29179 1809 26667 245279;245280;245281;245282;245283;245284;245285;245286 195081;195082;195083;195084;195085;195086;195087;195088;195089;195090;195091 195084 2931 10 LGHYATQLQK Unmodified 1157.6193 0.61930707 1450 P42229 STAT5A Signal transducer and activator of transcription 5A yes yes 0 0 0 By MS/MS 2 0 1 1 34.553 28.321 3 0.009266 39852 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.527 33.663 24050000 24050000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29180 1450 26668 245287 195092 195092 1 LGHYSLSPVYESGQQMFQGVK Oxidation (M) 2370.1314 0.13143146 5138 Q9Y337 KLK5 Kallikrein-5 yes yes 0 1 0 By MS/MS 10 0 1 1 72.045 72.229 3 2.6047E-12 83132 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 66.893 62.822 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29181 5138 26669 245288 195093 195093 6524 1 LGHYTDAIK Unmodified 1016.5291 0.52909508 3819 Q96EQ0 SGTB Small glutamine-rich tetratricopeptide repeat-containing protein beta yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 34.96 30.11 2 0.0081026 37983 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 91.069 15.214 35175000 26874000 0 8300700 0 0 0 0 0 0 0 0 0 0 0 0 29182 3819 26670 245289;245290 195094;195095 195095 2 LGIFENLNK Unmodified 1046.576 0.57604528 2326 Q13613 MTMR1 Myotubularin-related protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 74.094 73.055 2 0.0067752 83206 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.184 40.011 156650000 43043000 22634000 0 4996600 5399000 9318500 5106300 5894000 6084700 9516500 6773600 11337000 7302800 6170100 13072000 29183 2326 26671 245291;245292;245293;245294;245295;245296;245297;245298;245299;245300;245301;245302;245303;245304;245305 195096;195097;195098;195099;195100;195101;195102;195103;195104;195105;195106 195098 11 LGIGMDTCVIPLR Unmodified 1443.7578 0.75779117 1610 P49903 SEPHS1 Selenide, water dikinase 1 yes yes 0 0 0 By MS/MS 10 0 1 1 85.679 85.847 2 0.0012048 99227 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.374 44.191 4138300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4138300 29184 1610 26672 245306 195107 195107 1 LGIGMDTCVIPLR Oxidation (M) 1459.7527 0.75270579 1610 P49903 SEPHS1 Selenide, water dikinase 1 yes yes 0 1 0 By MS/MS 10 0 1 1 80.12 80.232 2 0.015544 91941 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 51.927 31.937 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29185 1610 26672 245307 195108 195108 2588 1 LGIHEDSQNR Unmodified 1167.5632 0.56324876 850 P07900 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.9 5 27 2 1 2 2 2 3 2 2 2 2 2 2 3 2 3 14.897 14.828 2;3 0.002233 13328 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 76.228 62.021 3668500000 30765000 259850 31714000 195970000 107030000 188630000 216680000 171860000 95671000 329090000 508570000 414890000 326180000 329420000 721760000 29186 850 26673 245308;245309;245310;245311;245312;245313;245314;245315;245316;245317;245318;245319;245320;245321;245322;245323;245324;245325;245326;245327;245328;245329;245330;245331;245332;245333;245334;245335;245336;245337;245338;245339 195109;195110;195111;195112;195113;195114;195115;195116;195117;195118;195119;195120;195121;195122;195123;195124 195119 14 LGIHEDSQNRK Unmodified 1295.6582 0.65821178 850 P07900 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.62 3.92 1 6 2 12 4 3 2 1 1 1 1 1 1 1 2 1 1 1 16.106 15.13 2;3 8.7889E-07 10924 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 120.06 73.71 11904000000 7493600000 460720000 441470000 137300000 0 313890000 207120000 143210000 155080000 208130000 756750000 467610000 0 300990000 817710000 29187 850 26674 245340;245341;245342;245343;245344;245345;245346;245347;245348;245349;245350;245351;245352;245353;245354;245355;245356;245357;245358;245359;245360 195125;195126;195127;195128;195129;195130;195131;195132;195133;195134;195135;195136;195137;195138;195139;195140;195141;195142;195143;195144;195145;195146;195147;195148 195131 19 LGIHEDSQNRKK Unmodified 1423.7532 0.75317479 850 P07900 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 7.563 7.2869 3 0.026602 11810 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.401 31.953 78181000 46198000 0 0 0 0 781250 2655200 2195800 0 0 6442000 3196700 3164200 3292600 10255000 29188 850 26675 245361;245362;245363;245364;245365;245366;245367;245368;245369 195149;195150 195150 1 LGIHEDSTNR Unmodified 1140.5523 0.55234972 862 P08238 HSP90AB1 Heat shock protein HSP 90-beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 30 2 3 2 2 2 2 3 3 2 3 3 3 16.253 16.444 2;3 4.8294E-27 14917 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 193.38 170.85 14345000000 0 0 0 585510000 412080000 1314100000 806100000 606300000 582910000 1158500000 1833400000 1599800000 1286300000 1173300000 2986400000 29189 862 26676 245370;245371;245372;245373;245374;245375;245376;245377;245378;245379;245380;245381;245382;245383;245384;245385;245386;245387;245388;245389;245390;245391;245392;245393;245394;245395;245396;245397;245398;245399 195151;195152;195153;195154;195155;195156;195157;195158;195159;195160;195161;195162;195163;195164;195165;195166;195167;195168;195169;195170;195171;195172;195173;195174 195158 20 LGIHEDSTNRR Unmodified 1296.6535 0.65346075 862 P08238 HSP90AB1 Heat shock protein HSP 90-beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 1 1 2 3 2 2 2 2 2 2 2 2 12.684 12.858 2;3 6.2459E-06 11165 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 107.83 83.54 801740000 0 0 0 37025000 30655000 98717000 55634000 46451000 34985000 72216000 93951000 79603000 60266000 51638000 140600000 29190 862 26677 245400;245401;245402;245403;245404;245405;245406;245407;245408;245409;245410;245411;245412;245413;245414;245415;245416;245417;245418;245419;245420;245421;245422 195175;195176;195177;195178;195179;195180;195181;195182;195183;195184;195185;195186;195187 195183 10 LGIHEDSTNRRR Unmodified 1452.7546 0.75457178 862 P08238 HSP90AB1 Heat shock protein HSP 90-beta yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 9.8449 10.108 3 0.011868 8300 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.439 33.549 11807000 0 0 0 0 0 0 0 0 0 0 0 1981300 2516000 1572800 5737300 29191 862 26678 245423;245424;245425;245426 195188 195188 1 LGIHSALLDEK Unmodified 1194.6608 0.66083754 3129 Q86SX6 GLRX5 Glutaredoxin-related protein 5, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS 6 4 3 3 2 1 1 1 1 62.049 58.45 2;3 2.7006E-08 80312 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 153.97 96.01 120860000 95592000 13410000 0 0 0 0 1766400 0 0 0 0 0 0 3400500 6689500 29192 3129 26679 245427;245428;245429;245430;245431;245432 195189;195190;195191;195192 195192 3 LGIIGVVNR Unmodified 939.58655 0.58655038 154 O00429 DNM1L Dynamin-1-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.771 67.854 2 2.1393E-05 77553 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 135.87 99.68 794280000 0 0 0 44130000 40920000 96918000 63727000 48711000 45354000 84446000 72054000 84537000 63315000 53788000 96378000 29193 154 26680 245433;245434;245435;245436;245437;245438;245439;245440;245441;245442;245443;245444 195193;195194;195195;195196;195197;195198;195199;195200;195201 195201 7 LGILDLLDEECK Unmodified 1416.717 0.71703179 5006;5204 Q9ULV0;Q9Y4I1 MYO5B;MYO5A Unconventional myosin-Vb;Unconventional myosin-Va no no 0 0 0 By MS/MS 10 0 1 1 94.775 94.922 2 0.0057565 110051 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.283 52.454 1353400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1353400 29194 5006;5204 26681 245445 195202 195202 1 LGINDIEGQR Unmodified 1113.5778 0.57783619 2852 Q68CP9 ARID2 AT-rich interactive domain-containing protein 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 54.646 54.777 2 0.020528 61071 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.187 24.695 151460000 0 0 0 8039000 7650800 17706000 13045000 9798100 7656700 15497000 12354000 15677000 12149000 16450000 15437000 29195 2852 26682 245446;245447;245448;245449;245450;245451;245452;245453;245454;245455;245456;245457 195203;195204 195203 1 LGINSLQELK Unmodified 1113.6394 0.63937381 1768 P55327 TPD52 Tumor protein D52 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 73.968 72.821 2 5.6287E-189 83723 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 238.54 148.23 10352000000 1284300000 3135900000 594390000 207690000 448980000 315230000 285820000 501240000 326870000 514020000 568990000 688110000 430730000 401260000 648970000 29196 1768 26683 245458;245459;245460;245461;245462;245463;245464;245465;245466;245467;245468;245469;245470;245471;245472;245473;245474 195205;195206;195207;195208;195209;195210;195211;195212;195213;195214;195215;195216;195217;195218;195219;195220;195221;195222;195223;195224 195217 20 LGIQQLK Unmodified 798.49634 0.49633839 4260 Q9BZD4 NUF2 Kinetochore protein Nuf2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.57 3.96 3 4 1 1 1 1 1 1 1 46.742 44.425 2 0.013904 57860 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.68 34.749 406050000 198110000 149410000 8897900 0 0 0 0 11053000 8744300 0 0 0 14007000 0 15816000 29197 4260 26684 245475;245476;245477;245478;245479;245480;245481 195225;195226;195227;195228;195229;195230 195225 6 LGIQTDDK Unmodified 888.45526 0.45526144 724 P00390 GSR Glutathione reductase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 23.823 23.056 2 0.0087284 23509 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.212 48.237 1253300000 0 1171200000 6013200 0 0 2740300 0 0 2650200 0 0 19787000 0 15564000 35392000 29198 724 26685 245482;245483;245484;245485;245486;245487;245488 195231;195232 195232 1 LGISDVAWSSDSNLLVSASDDK Unmodified 2278.0965 0.096485745 1865 P61964 WDR5 WD repeat-containing protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 2 3 2 91.911 87.019 2;3 1.078E-60 109644 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 135.47 120.86 80140000 30803000 39661000 9675800 0 0 0 0 0 0 0 0 0 0 0 0 29199 1865 26686 245489;245490;245491;245492;245493;245494;245495 195233;195234;195235;195236;195237;195238;195239 195235 6 LGISGDIDLTSASYTMI Oxidation (M) 1771.855 0.85498183 1065 P17931 LGALS3 Galectin-3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.27 0.617 1 6 4 4 5 2 95.507 92.247 2 4.8049E-35 91109 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 128.35 115.85 220980000 71953000 122260000 26763000 0 0 0 0 0 0 0 0 0 0 0 0 29200 1065 26687 245496;245497;245498;245499;245500;245501;245502;245503;245504;245505;245506 195240;195241;195242;195243;195244;195245;195246;195247;195248;195249 195248 1499 9 LGISGDIDLTSASYTMI Unmodified 1755.8601 0.86006721 1065 P17931 LGALS3 Galectin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0.577 1 4 1 2 3 1 99.501 97.015 2 2.5153E-35 115420 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.12 112.02 142440000 24554000 108350000 9539600 0 0 0 0 0 0 0 0 0 0 0 0 29201 1065 26687 245507;245508;245509;245510;245511;245512 195250;195251;195252;195253;195254;195255;195256 195251 7 LGISLTR Unmodified 758.46504 0.46503826 3736 Q96AD5;Q7Z6Z6 PNPLA2;PNPLA5 Patatin-like phospholipase domain-containing protein 2;Patatin-like phospholipase domain-containing protein 5 yes no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 53.068 53.367 2 0.025588 60324 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 80.462 0 99520000 0 0 0 0 0 0 10172000 0 0 18281000 19134000 0 15660000 12643000 23631000 29202 3736 26688 245513;245514;245515;245516;245517;245518 195257;195258;195259 195259 3 LGITHVLNAAEGR Unmodified 1349.7415 0.74154747 1653 P51452 DUSP3 Dual specificity protein phosphatase 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 1 2 2 2 1 2 2 2 2 2 1 61.382 61.526 2;3 3.8321E-08 69151 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 105.46 88.828 153950000 0 0 0 2984500 3798900 14494000 8191100 13651000 6724600 24001000 19064000 20501000 12567000 14257000 13714000 29203 1653 26689 245519;245520;245521;245522;245523;245524;245525;245526;245527;245528;245529;245530;245531;245532;245533;245534;245535;245536;245537;245538 195260;195261;195262;195263;195264;195265 195261 5 LGITQLR Unmodified 799.49159 0.49158736 5090 Q9Y285 FARSA Phenylalanine--tRNA ligase alpha subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 49.763 49.905 2 0.023018 56693 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 103.29 0 337010000 0 0 0 22265000 18637000 27884000 23288000 30816000 20360000 29833000 35375000 35341000 0 32726000 60490000 29204 5090 26690 245539;245540;245541;245542;245543;245544;245545;245546;245547;245548;245549 195266;195267;195268;195269;195270;195271 195267 6 LGIYEAMK Oxidation (M) 939.47355 0.47355404 1029 P15924 DSP Desmoplakin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 38.16 38.3 2 0.010208 43191 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 68.787 29.981 546770000 0 0 0 154070000 36107000 0 41531000 87328000 24998000 33265000 32761000 44228000 60374000 32112000 0 29205 1029 26691 245550;245551;245552;245553;245554;245555;245556;245557;245558;245559 195272;195273;195274;195275;195276;195277;195278;195279 195278 1434 8 LGKDAVEDLESVGK Unmodified 1458.7566 0.75658842 1995 P81605 DCD Dermcidin;Survival-promoting peptide;DCD-1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 10 1 1 2 1 1 1 2 1 61.519 61.599 2;3 0.0009897 70885 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 42.52 37.403 96823000 0 0 0 4690800 1116500 0 35130000 4190900 0 1937000 0 15731000 7425900 0 26601000 29206 1995 26692 245560;245561;245562;245563;245564;245565;245566;245567;245568;245569 195280;195281 195281 2 LGKPDFDCSK Unmodified 1165.5438 0.54375887 1772 P55789 GFER FAD-linked sulfhydryl oxidase ALR yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 33.188 28.485 3 0.032322 37760 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 47.559 32.893 21913000 4563200 12007000 5343000 0 0 0 0 0 0 0 0 0 0 0 0 29207 1772 26693 245570;245571;245572 195282 195282 1 LGLAEGTSPFIK Unmodified 1231.6812 0.68123863 1254 P29597 TYK2 Non-receptor tyrosine-protein kinase TYK2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 76.011 75.985 2 0.023884 87651 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 53.756 28.503 10701000 0 0 0 0 2342900 0 2765200 0 0 5593100 0 0 0 0 0 29208 1254 26694 245573;245574;245575;245576 195283;195284;195285 195284 3 LGLAEPDMLR Unmodified 1113.5852 0.58522975 5241 Q9Y5N6 ORC6 Origin recognition complex subunit 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 73.217 73.395 2 0.0069846 83903 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.565 38.642 65308000 0 0 0 0 0 4842600 0 7027100 0 7071700 9023100 15029000 7219900 8804800 6289100 29209 5241 26695 245577;245578;245579;245580;245581;245582;245583;245584;245585 195286;195287;195288;195289;195290;195291;195292 195287 7 LGLAEPDMLRK Unmodified 1241.6802 0.68019277 5241 Q9Y5N6 ORC6 Origin recognition complex subunit 6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 1 2 2 2 2 2 2 2 2 2 61.549 61.654 2;3 0.0024632 70184 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 42.243 36.209 552640000 0 0 0 18124000 25315000 39032000 33443000 54989000 30366000 40172000 59267000 66260000 47924000 48615000 89138000 29210 5241 26696 245586;245587;245588;245589;245590;245591;245592;245593;245594;245595;245596;245597;245598;245599;245600;245601;245602;245603;245604;245605;245606;245607;245608 195293;195294;195295;195296;195297;195298;195299;195300;195301;195302;195303;195304;195305 195298 10 LGLAEPDMLRK Oxidation (M) 1257.6751 0.67510739 5241 Q9Y5N6 ORC6 Origin recognition complex subunit 6 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 2 1 1 1 2 1 2 2 1 47.247 47.407 3 0.0012034 53806 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 60.255 18.856 408270000 0 0 0 16970000 41361000 0 31890000 0 25284000 28215000 69626000 50763000 65347000 46647000 32163000 29211 5241 26696 245609;245610;245611;245612;245613;245614;245615;245616;245617;245618;245619;245620;245621;245622 195306;195307;195308;195309;195310;195311;195312;195313;195314;195315;195316 195313 6640 10 LGLALNFSVFYYEILNSPDR Unmodified 2330.1947 0.19468365 1882 P62258 YWHAE 14-3-3 protein epsilon yes yes 0 0 0 By MS/MS By MS/MS 2.6 0.49 2 3 4 1 101.08 98.697 2;3 0.010398 118574 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 29.636 21.547 1840300 694410 1145900 0 0 0 0 0 0 0 0 0 0 0 0 0 29212 1882 26697 245623;245624;245625;245626;245627 195317;195318;195319 195318 3 LGLAPQIQDLYGK Unmodified 1414.782 0.78201531 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.85 3.86 7 1 12 2 4 2 1 1 1 1 1 1 1 1 1 1 1 1 83.079 81.583 2 1.9573E-11 94348 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 119.68 101.82 4447000000 329860000 1368400000 23425000 71130000 159700000 284910000 155060000 162660000 182850000 335720000 264630000 274200000 143430000 206090000 484950000 29213 1518 26698 245628;245629;245630;245631;245632;245633;245634;245635;245636;245637;245638;245639;245640;245641;245642;245643;245644;245645;245646;245647 195320;195321;195322;195323;195324;195325;195326;195327;195328;195329;195330;195331;195332;195333;195334;195335;195336 195331 16 LGLDDFESLK Unmodified 1135.5761 0.57610486 5101 Q9Y2H1 STK38L Serine/threonine-protein kinase 38-like yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 4 1 2 1 81.028 81.101 2 0.010746 94036 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 55.461 33.33 11711000 0 0 0 0 0 4321400 0 0 0 3539100 0 0 0 3850500 0 29214 5101 26699 245648;245649;245650;245651 195337;195338 195337 2 LGLDSEEDYYTPQK Unmodified 1656.7519 0.75189697 3496 Q8TD19 NEK9 Serine/threonine-protein kinase Nek9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 62.14 62.447 2 0.0003697 71274 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 91.937 78.128 38012000 0 0 0 0 0 4859000 0 0 0 0 0 7066100 0 4177400 21909000 29215 3496 26700 245652;245653;245654;245655 195339;195340;195341;195342 195342 4 LGLDYSYDLAPR Unmodified 1381.6878 0.68778057 2934 Q6P4A8 PLBD1 Phospholipase B-like 1;Phospholipase B-like 1 chain A;Phospholipase B-like 1 chain B;Phospholipase B-like 1 chain C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 78.343 78.404 2 1.3684E-05 90981 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 107.24 88.464 40931000 0 0 0 4557300 0 4130800 2190800 8615100 2847000 5461700 0 6157100 3157300 3814000 0 29216 2934 26701 245656;245657;245658;245659;245660;245661;245662;245663;245664;245665 195343;195344;195345;195346;195347;195348;195349 195348 7 LGLEDFDFK Unmodified 1082.5284 0.52842638 2691 Q504Q3 PAN2 PAB-dependent poly(A)-specific ribonuclease subunit PAN2 yes yes 0 0 0 By MS/MS 2 0 1 1 88.498 80.367 2 0.049195 104588 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.301 38.421 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29217 2691 26702 245666 195350 195350 1 LGLEDFESLK Unmodified 1149.5918 0.59175492 2507 Q15208 STK38 Serine/threonine-protein kinase 38 yes yes 0 0 0 By MS/MS 10 0 1 1 82.26 82.369 2 0.049771 94359 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 44.203 28 27937000 0 0 0 0 0 0 0 0 0 0 0 0 0 27937000 0 29218 2507 26703 245667 195351 195351 1 LGLEFFDQPAVPLAR Unmodified 1671.8984 0.89844205 1246 P29372 MPG DNA-3-methyladenine glycosylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 93.25 93.352 2 0.0024684 108427 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.434 50.746 23491000 0 0 0 0 911470 1538100 0 1460000 1323800 3862600 2630800 2304600 701700 1280700 7477800 29219 1246 26704 245668;245669;245670;245671;245672;245673;245674;245675;245676;245677 195352;195353;195354;195355;195356;195357 195355 4 LGLENAEALIR Unmodified 1197.6717 0.67173657 916 P10155 TROVE2 60 kDa SS-A/Ro ribonucleoprotein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 81.022 80.888 2 0.00031183 93114 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 118.18 70.98 178350000 0 0 2350900 4754800 7206900 6958700 7907000 11065000 7465600 13818000 19402000 20888000 10454000 18272000 47807000 29220 916 26705 245678;245679;245680;245681;245682;245683;245684;245685;245686;245687;245688;245689;245690 195358;195359;195360;195361;195362;195363;195364;195365;195366;195367;195368;195369 195360 11 LGLFPSNFVK Unmodified 1120.6281 0.62808085 5236 Q9Y5K6 CD2AP CD2-associated protein yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.45 3.29 1 1 9 2 1 1 1 1 1 1 1 1 1 85.031 84.806 2 0.0074458 108689 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.165 65.496 59414000 10225000 0 0 1961200 3533800 0 0 3949200 0 5395800 5092700 9592400 3391200 4123100 12150000 29221 5236 26706 245691;245692;245693;245694;245695;245696;245697;245698;245699;245700;245701 195370;195371;195372;195373;195374;195375 195371 6 LGLGDSNNQSTLK Unmodified 1345.6838 0.68375782 2573 Q15751 HERC1 Probable E3 ubiquitin-protein ligase HERC1 yes yes 0 0 0 By matching By MS/MS By matching By matching 10 0 4 1 1 1 1 41.56 41.649 2 0.0086301 46767 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 44.425 27.793 9753800 0 0 0 0 1030100 2715000 1702400 0 0 0 0 0 0 0 4306300 29222 2573 26707 245702;245703;245704;245705 195376 195376 1 LGLGEGAEEK Unmodified 1001.5029 0.50293991 1078 P18754 RCC1 Regulator of chromosome condensation yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 29.698 30.014 2 0.0018552 31176 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.136 42.254 123960000 0 0 0 0 0 6404100 7947900 5923400 4470800 0 16961000 21240000 0 16548000 44469000 29223 1078 26708 245706;245707;245708;245709;245710;245711;245712;245713 195377;195378;195379;195380;195381;195382;195383;195384 195379 5 LGLGGNAPVSIPQQSQSVK Unmodified 1879.0163 0.016325351 4371 Q9H2P0 ADNP Activity-dependent neuroprotector homeobox protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.632 71.698 2 0.00014121 81850 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.527 64.76 143960000 0 0 0 8142300 7892800 10455000 10686000 9720000 8180800 14386000 14328000 15096000 12555000 13888000 18627000 29224 4371 26709 245714;245715;245716;245717;245718;245719;245720;245721;245722;245723;245724;245725 195385;195386;195387;195388;195389;195390;195391 195387 7 LGLGIDEDDPTADDTSAAVTEEMPPLEGDDDTSRMEEVD 2 Oxidation (M) 4181.7424 0.7423986 850 P07900 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 0 2 1 By MS/MS By MS/MS 1.75 0.433 1 3 3 1 89.803 85.873 3;4 5.251E-86 92200 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 112.09 110.72 121770000 90552000 31216000 0 0 0 0 0 0 0 0 0 0 0 0 0 29225 850 26710 245726;245727;245728;245729 195392;195393;195394;195395 195393 1071;1072 4 LGLGIDEDDPTADDTSAAVTEEMPPLEGDDDTSRMEEVD Oxidation (M) 4165.7475 0.74748397 850 P07900 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 0 1 1 By MS/MS By MS/MS 1.67 0.471 1 2 2 1 93.156 90.609 3 4.6802E-106 92487 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 123.49 122.15 166210000 98330000 67879000 0 0 0 0 0 0 0 0 0 0 0 0 0 29226 850 26710 245730;245731;245732 195396;195397;195398 195397 1071;1072 3 LGLGIDEDDPTADDTSAAVTEEMPPLEGDDDTSRMEEVD Unmodified 4149.7526 0.75256935 850 P07900 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 0 0 1 By MS/MS By MS/MS 2 0.707 1 2 1 2 2 94.966 92.218 3 4.55E-203 92848 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 164.65 163.36 260360000 170880000 89474000 0 0 0 0 0 0 0 0 0 0 0 0 0 29227 850 26710 245733;245734;245735;245736 195399;195400;195401;195402 195401 4 LGLGIDEDEVAAEEPNAAVPDEIPPLEGDEDASR Unmodified 3531.6377 0.63766166 862 P08238 HSP90AB1 Heat shock protein HSP 90-beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 90.056 90.034 3 0.046361 104342 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 13.845 12.099 6207900 0 0 0 2220200 0 0 0 0 0 0 0 1319300 0 0 2668400 29228 862 26711 245737;245738;245739 195403 195403 1 LGLGIDEDEVAAEEPNAAVPDEIPPLEGDEDASRMEEVD Oxidation (M) 4150.8536 0.85360403 862 P08238 HSP90AB1 Heat shock protein HSP 90-beta yes yes 0 1 1 By MS/MS By MS/MS 2 0.707 1 2 1 3 1 96.461 93.635 3;4 6.6517E-31 93051 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 69.522 65.525 690340000 416130000 274210000 0 0 0 0 0 0 0 0 0 0 0 0 0 29229 862 26712 245740;245741;245742;245743 195404;195405;195406;195407 195406 1098 4 LGLGIDEDEVAAEEPNAAVPDEIPPLEGDEDASRMEEVD Unmodified 4134.8587 0.8586894 862 P08238 HSP90AB1 Heat shock protein HSP 90-beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.08 0.474 1 10 2 7 3 3 95.454 90.893 3;4 3.2925E-85 112551 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.74 110.47 1719800000 1125800000 560950000 33035000 0 0 0 0 0 0 0 0 0 0 0 0 29230 862 26712 245744;245745;245746;245747;245748;245749;245750;245751;245752;245753;245754;245755;245756 195408;195409;195410;195411;195412;195413;195414;195415;195416;195417;195418;195419;195420;195421;195422;195423;195424;195425 195419 18 LGLGLDDESNNQQAAATQSPGDSR Unmodified 2443.1211 0.12113737 2171 Q09472 EP300 Histone acetyltransferase p300 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.459 59.569 3 5.0576E-18 67819 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 83.602 69.871 99985000 0 0 0 8625400 5344100 7239700 6322700 9528800 4653400 8484100 9709900 12820000 6941900 8231000 12084000 29231 2171 26713 245757;245758;245759;245760;245761;245762;245763;245764;245765;245766;245767;245768 195426;195427;195428;195429;195430;195431;195432;195433;195434;195435;195436;195437;195438;195439;195440;195441;195442 195438 17 LGLGLDDESNNQQAAATQSPGDSRR Unmodified 2599.2222 0.22224839 2171 Q09472 EP300 Histone acetyltransferase p300 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 52.795 52.83 3 2.8791E-13 59767 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 60.278 57.701 59922000 0 0 0 4423000 3312100 4417700 6469800 4749100 3510700 5147700 6132900 0 12408000 9350700 0 29232 2171 26714 245769;245770;245771;245772;245773;245774;245775;245776;245777;245778 195443;195444;195445;195446;195447;195448;195449;195450;195451 195447 9 LGLGTISGSSSR Unmodified 1133.6041 0.60405094 3183 Q86WG5 SBF2 Myotubularin-related protein 13 yes yes 0 0 0 By MS/MS 10 0 1 1 49.251 49.414 2 0.0039224 55862 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 59.067 38.547 12474000 0 0 0 0 0 0 0 0 0 12474000 0 0 0 0 0 29233 3183 26715 245779 195452 195452 1 LGLGTLSSSLSR Unmodified 1189.6667 0.6666512 634 O95248 SBF1 Myotubularin-related protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.893 74.956 2 0.0048244 86749 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 73.841 50.77 48141000 0 0 0 2470100 3264500 5242700 2610000 2608800 3351500 6441300 4413500 5325200 3218000 3304200 5890800 29234 634 26716 245780;245781;245782;245783;245784;245785;245786;245787;245788;245789;245790;245791 195453;195454;195455;195456;195457;195458;195459 195457 6 LGLHQQGSEPSYLDR Unmodified 1698.8325 0.83254733 4174 Q9BV38 WDR18 WD repeat-containing protein 18 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 48.113 48.497 3 0.014127 54744 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 31.978 27.806 76745000 0 0 0 0 0 7704700 0 8560500 0 0 7647500 11737000 13810000 8818300 18467000 29235 4174 26717 245792;245793;245794;245795;245796;245797;245798 195460 195460 1 LGLHSLR Unmodified 794.47627 0.47627165 2011 P84077;P61204 ARF1;ARF3 ADP-ribosylation factor 1;ADP-ribosylation factor 3 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 33.517 33.649 2 0.040205 36317 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 68.7 4.1771 830590000 0 0 0 48699000 35129000 58961000 73950000 55135000 40720000 72963000 122270000 0 70550000 61795000 190410000 29236 2011 26718 245799;245800;245801;245802;245803;245804;245805;245806;245807;245808;245809 195461 195461 1 LGLHVTPSNVDQVSTPPAAK Unmodified 2030.0797 0.07965389 4605 Q9NRL2 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 66.155 64.832 3 3.2874E-86 86343 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 155.03 144.97 270250000 138190000 52405000 13406000 4803500 3640000 6902900 5723600 3733000 3081700 5856500 5833100 8465200 4963000 5152700 8097600 29237 4605 26719 245810;245811;245812;245813;245814;245815;245816;245817;245818;245819;245820;245821;245822;245823;245824;245825 195462;195463;195464;195465;195466;195467;195468;195469;195470;195471;195472;195473;195474;195475;195476;195477;195478 195471 17 LGLIPIHADPR Unmodified 1200.6979 0.69789175 260 O15160 POLR1C DNA-directed RNA polymerases I and III subunit RPAC1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.279 69.356 3 0.017808 78524 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.625 29.937 204820000 0 0 0 9254900 6114300 21748000 10768000 10350000 8921800 17295000 19670000 28484000 16197000 18988000 37025000 29238 260 26720 245826;245827;245828;245829;245830;245831;245832;245833;245834;245835;245836;245837 195479;195480 195480 1 LGLLDNHSSEFNVTR Unmodified 1700.8482 0.84819739 1379 P36776 LONP1 Lon protease homolog, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 70.909 71.098 3 0.0019563 81138 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.757 23.841 29876000 0 0 0 0 0 6840200 0 3157200 2855100 4648000 5394200 0 0 0 6981500 29239 1379 26721 245838;245839;245840;245841;245842;245843 195481 195481 1 LGLLDTQTSQVLTAVDK Unmodified 1800.9833 0.98329389 1802 P58107 EPPK1 Epiplakin yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 85.842 85.909 2 1.5737E-36 99293 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 155.42 124.55 56584000 0 0 0 1467500 3351100 3617100 3673500 3768800 2975300 9047700 5399400 5970800 3816000 3598000 9899200 29240 1802 26722 245844;245845;245846;245847;245848;245849;245850;245851;245852;245853;245854;245855 195482;195483;195484;195485;195486;195487;195488;195489;195490;195491;195492 195485 11 LGLLEALLK Unmodified 968.62702 0.62701821 3465 Q8NI27 THOC2 THO complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 93.801 93.931 2 0.040615 108906 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.349 26.364 2644700 0 0 0 0 0 0 0 0 0 872020 0 0 0 0 1772700 29241 3465 26723 245856;245857 195493 195493 1 LGLLGLPAPK Unmodified 977.62735 0.62735256 4010 Q99459 CDC5L Cell division cycle 5-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.704 81.766 2 0.0030458 94098 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.923 53.104 394280000 0 0 0 17206000 20138000 27762000 25014000 24992000 22447000 43495000 38135000 47379000 28930000 33209000 65573000 29242 4010 26725 245858;245859;245860;245861;245862;245863;245864;245865;245866;245867;245868;245869 195494;195495;195496;195497;195498;195499;195500;195501;195502;195503;195504;195505 195497 12 LGLLTSDADCEIEK Unmodified 1562.7498 0.74978848 4859 Q9UBT7 CTNNAL1 Alpha-catulin yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 74.864 70.558 2 0.00081965 84979 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 73.781 64.593 35710000 0 35710000 0 0 0 0 0 0 0 0 0 0 0 0 0 29243 4859 26726 245870;245871 195506 195506 1 LGLMPPPEPK Oxidation (M) 1093.5842 0.58416712 323 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 13 1 1 1 1 1 1 2 2 1 1 1 52.996 53.089 2 0.0066061 60284 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 56.729 32.574 227010000 0 0 0 14222000 10922000 22185000 18893000 17734000 13524000 26833000 28396000 0 31645000 22993000 19668000 29244 323 26727 245872;245873;245874;245875;245876;245877;245878;245879;245880;245881;245882;245883;245884 195507;195508;195509;195510;195511;195512;195513;195514 195511 410 5 LGLMPPPEPK Unmodified 1077.5893 0.5892525 323 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 63.918 64.014 2 0.0077624 72977 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 61.679 15.253 146760000 0 0 0 8571300 6463500 0 11312000 15271000 0 15070000 12559000 20730000 16096000 12232000 28458000 29245 323 26727 245885;245886;245887;245888;245889;245890;245891;245892;245893;245894 195515;195516;195517;195518;195519;195520;195521;195522;195523;195524;195525;195526;195527 195517 13 LGLNLPAGR Unmodified 909.5396 0.53960019 3118 Q7Z6R9 TFAP2D Transcription factor AP-2-delta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.763 60.868 2 0.0030679 70444 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 91.9 0 234400000 0 0 0 14499000 12245000 16044000 18231000 22887000 13580000 21312000 23219000 23114000 20095000 18846000 30332000 29246 3118 26728 245895;245896;245897;245898;245899;245900;245901;245902;245903;245904;245905;245906 195528;195529;195530;195531;195532;195533;195534;195535;195536;195537;195538 195537 11 LGLPGDEVDNK Unmodified 1155.5772 0.57716749 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 48.853 48.991 2 0.0057959 54799 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 70.028 53.252 115230000 0 0 0 5726800 5591800 0 6631400 4277000 0 15705000 0 21457000 18806000 8045300 28993000 29247 1986 26729 245907;245908;245909;245910;245911;245912;245913;245914;245915 195539;195540;195541;195542 195541 4 LGLPGEAGLEGSEPSDALGPDDKK Unmodified 2351.1492 0.1492496 202 O14686 KMT2D Histone-lysine N-methyltransferase 2D yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 73.785 73.883 3 6.9429E-05 85055 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 36.9 32.547 50683000 0 0 0 0 5494800 5776200 4269900 7050600 0 0 0 6733900 7260200 6794500 7302600 29248 202 26730 245916;245917;245918;245919;245920;245921;245922;245923 195543;195544;195545;195546 195543 4 LGLPGEVFGR Unmodified 1043.5764 0.57637963 658 O95409 ZIC2 Zinc finger protein ZIC 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 77.414 77.564 2 0.034153 89062 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.876 18.834 27931000 0 0 0 0 0 2961300 1751400 0 2268300 4494200 4675800 0 0 0 11780000 29249 658 26731 245924;245925;245926;245927;245928;245929 195547 195547 1 LGLPLLLMPEEAR Oxidation (M) 1466.8167 0.81668625 4133 Q9BSV6 TSEN34 tRNA-splicing endonuclease subunit Sen34 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 91.258 91.392 2 0.0018598 105920 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 56.783 45.632 28279000 0 0 0 0 0 2812800 2129900 2934500 2294700 5723300 0 3474300 0 1985500 6923900 29250 4133 26732 245930;245931;245932;245933;245934;245935;245936;245937 195548;195549;195550;195551;195552 195551 5615 5 LGLPLLLMPEEAR Unmodified 1450.8218 0.82177163 4133 Q9BSV6 TSEN34 tRNA-splicing endonuclease subunit Sen34 yes yes 0 0 0 By MS/MS 10 0 1 1 96.15 96.304 2 0.014779 111747 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.589 32.369 1005100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1005100 29251 4133 26732 245938 195553 195553 1 LGLPPLTPEQQEALQK Unmodified 1760.9672 0.96724989 4912 Q9UHX1 PUF60 Poly(U)-binding-splicing factor PUF60 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.29 6 1 24 2 3 2 2 2 2 2 2 2 2 2 2 2 2 2 80.171 79.383 2;3 1.3443E-35 91536 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 199.03 179.79 6457700000 55513000 2954700000 29190000 144850000 230780000 236160000 231480000 244450000 209740000 355880000 308250000 341670000 293090000 358890000 463060000 29252 4912 26733 245939;245940;245941;245942;245943;245944;245945;245946;245947;245948;245949;245950;245951;245952;245953;245954;245955;245956;245957;245958;245959;245960;245961;245962;245963;245964;245965;245966;245967;245968;245969 195554;195555;195556;195557;195558;195559;195560;195561;195562;195563;195564;195565;195566;195567;195568;195569;195570;195571;195572;195573;195574;195575;195576;195577;195578;195579;195580;195581;195582;195583 195563 23 LGLQASDIK Unmodified 943.53385 0.53384611 2443 Q14746 COG2 Conserved oligomeric Golgi complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 48.412 46.608 2 0.016525 60239 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.72 52.966 118300000 0 88760000 1851800 0 0 9059900 0 6922600 0 0 11701000 0 0 0 0 29253 2443 26734 245970;245971;245972;245973;245974;245975;245976;245977 195584;195585;195586;195587;195588;195589 195587 5 LGLQDGSTSLLPEQLLSAPK Unmodified 2066.1259 0.12593538 2784 Q5T7V8 GORAB RAB6-interacting golgin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 92.225 92.378 2 0.00028047 107064 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.31 44.031 6447100 0 0 0 0 0 0 0 0 0 2190200 1277300 0 0 0 2979600 29254 2784 26735 245978;245979;245980 195590 195590 1 LGLQEGSNNSSPVDFVNNK Unmodified 2017.9705 0.97049737 3964 Q96R06 SPAG5 Sperm-associated antigen 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.17 3.18 1 2 9 3 1 1 1 1 1 1 2 1 74.37 73.246 2;3 1.5964E-73 84703 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 215.87 193.15 160450000 0 71802000 0 5298500 0 0 0 0 0 17798000 13297000 17967000 19041000 0 15243000 29255 3964 26736 245981;245982;245983;245984;245985;245986;245987;245988;245989;245990;245991;245992 195591;195592;195593;195594;195595;195596;195597;195598;195599;195600;195601;195602;195603 195601 13 LGLQHLR Unmodified 835.50282 0.50282075 2012 P84085 ARF5 ADP-ribosylation factor 5 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.985 32.172 2 0.023328 35241 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 91.093 56.201 264710000 0 0 0 15843000 11010000 15659000 23914000 16809000 17806000 11891000 23690000 52653000 20539000 17322000 37578000 29256 2012 26737 245993;245994;245995;245996;245997;245998;245999;246000;246001;246002;246003;246004 195604;195605;195606;195607 195605 3 LGLQNDLFSLAR Unmodified 1345.7354 0.73539946 1771 P55786 NPEPPS Puromycin-sensitive aminopeptidase yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 87.717 87.871 2 0.0015046 101729 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 67.334 45.87 7822700 0 0 0 0 0 0 0 0 0 0 3364100 0 0 4458600 0 29257 1771 26738 246005;246006 195608;195609 195608 2 LGLQSLR Unmodified 785.47594 0.4759373 1071 P18085 ARF4 ADP-ribosylation factor 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 50.409 50.564 2 1.0279E-05 57801 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 158.38 50.827 2083000000 0 0 0 136990000 119980000 157150000 184250000 135660000 91478000 171240000 252670000 257750000 147260000 141550000 286970000 29258 1071 26739 246007;246008;246009;246010;246011;246012;246013;246014;246015;246016;246017;246018 195610;195611;195612;195613;195614;195615;195616;195617;195618;195619;195620;195621;195622;195623;195624;195625;195626;195627;195628 195627 18 LGLQYSQGLVSGSNAR Unmodified 1648.8533 0.85328277 4916 Q9UI10 EIF2B4 Translation initiation factor eIF-2B subunit delta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 66.656 66.804 2 0.00036297 76651 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 65.234 50.543 44162000 0 0 0 0 2505300 4485300 3719200 0 0 4816100 4851300 5215100 5203400 5998900 7366900 29259 4916 26740 246019;246020;246021;246022;246023;246024;246025;246026;246027;246028;246029 195629;195630;195631;195632;195633;195634;195635;195636;195637;195638;195639 195630 11 LGLSDNEIQR Unmodified 1143.5884 0.58840088 2381 Q14160;Q9BTT6 SCRIB;LRRC1 Protein scribble homolog;Leucine-rich repeat-containing protein 1 yes no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 46.939 47.106 2 0.0023937 52936 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 103.87 79.717 125770000 0 0 0 9505200 6507400 13501000 8561000 0 0 11573000 13343000 17863000 14173000 11549000 19196000 29260 2381 26741 246030;246031;246032;246033;246034;246035;246036;246037;246038;246039 195640;195641;195642;195643;195644;195645;195646;195647 195640 8 LGLSLVVPGGGIK Unmodified 1208.7493 0.74925861 4059 Q99747 NAPG Gamma-soluble NSF attachment protein yes yes 0 0 0 By MS/MS 2 0 1 1 91.033 82.902 2 0.028425 107633 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.064 26.855 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29261 4059 26742 246040 195648 195648 1 LGLSTLGELK Unmodified 1029.607 0.60701105 325 O43399 TPD52L2 Tumor protein D54 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.279 76.337 2 0.00052219 88482 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 126.41 77.656 2442200000 0 0 0 91560000 130150000 135420000 140740000 183130000 132850000 261230000 304160000 327820000 212100000 215720000 307330000 29262 325 26743 246041;246042;246043;246044;246045;246046;246047;246048;246049;246050;246051;246052 195649;195650;195651;195652;195653;195654;195655;195656;195657;195658;195659;195660;195661 195658 13 LGLTEDQFIR Unmodified 1190.6295 0.62953741 1234 P28340 POLD1 DNA polymerase delta catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.642 73.709 2 0.0021243 85282 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 86.205 65.972 517470000 0 0 0 21440000 27750000 55850000 35662000 41802000 39122000 40130000 43481000 60031000 49359000 43349000 59497000 29263 1234 26744 246053;246054;246055;246056;246057;246058;246059;246060;246061;246062;246063;246064 195662;195663;195664;195665;195666;195667;195668;195669;195670;195671;195672;195673;195674;195675;195676 195672 15 LGLTEDQFIRTPTGDEFVK Unmodified 2165.1004 0.10044891 1234 P28340 POLD1 DNA polymerase delta catalytic subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 2 1 6 2 1 1 1 1 1 1 1 82.409 81.339 3 3.413E-88 101708 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 135.29 117.13 278160000 0 190180000 31353000 0 0 6353900 0 4099100 5882700 10554000 0 9139400 0 0 20600000 29264 1234 26745 246065;246066;246067;246068;246069;246070;246071;246072;246073 195677;195678;195679;195680;195681;195682;195683;195684 195679 8 LGLVFDDVVGIVEIINSK Unmodified 1929.0823 0.082279652 2055 Q01518 CAP1 Adenylyl cyclase-associated protein 1 yes yes 0 0 0 By MS/MS 2 0.816 1 1 1 3 106.08 103.91 3 0.00015261 124563 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.691 58.031 17693000 17693000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29265 2055 26746 246074;246075;246076 195685;195686;195687 195687 3 LGLVGVNLTLDGVK Unmodified 1396.829 0.8289655 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.47 3.59 3 2 10 2 2 1 1 1 1 1 1 1 1 1 1 1 90.059 88.649 2 4.3499E-18 111460 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 121.08 87.21 682990000 301430000 95312000 12660000 0 18342000 11901000 26333000 41897000 87450000 35443000 24161000 20479000 0 1435500 6144700 29266 1714 26747 246077;246078;246079;246080;246081;246082;246083;246084;246085;246086;246087;246088;246089;246090;246091 195688;195689;195690;195691;195692;195693;195694;195695;195696;195697;195698;195699;195700;195701;195702;195703;195704;195705;195706;195707;195708;195709 195699 22 LGLVIPSSGSGSGNQSIDR Unmodified 1842.9436 0.94355434 4997 Q9ULJ3 ZBTB21 Zinc finger and BTB domain-containing protein 21 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.549 71.62 2 4.0565E-24 82186 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 102.62 88.958 233400000 0 0 0 13830000 16617000 16802000 15531000 16106000 12016000 22997000 31259000 26477000 18855000 17448000 25463000 29267 4997 26748 246092;246093;246094;246095;246096;246097;246098;246099;246100;246101;246102;246103 195710;195711;195712;195713;195714;195715;195716;195717;195718;195719;195720;195721 195719 12 LGMAGVPEDGEQPGWPSPAK Unmodified 2021.9517 0.95167618 1462 P42684 ABL2 Abelson tyrosine-protein kinase 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 76.36 76.439 2 0.00024419 88186 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 49.12 43.514 30912000 0 0 0 0 2871200 0 0 0 0 5138200 6884200 0 3635400 3669300 8713400 29268 1462 26749 246104;246105;246106;246107;246108;246109 195722;195723;195724;195725;195726 195722 3 LGMAVSSDTCR Unmodified 1195.5325 0.53254226 3096 Q7Z4G1 COMMD6 COMM domain-containing protein 6 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 35.256 35.393 2 0.0043894 37793 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.593 33.171 10085000 0 0 0 0 3071700 0 0 0 0 0 0 0 0 0 7013700 29269 3096 26750 246110;246111 195727;195728 195727 2 LGMAVSSDTCRSLK Oxidation (M) 1539.7385 0.73851229 3096 Q7Z4G1 COMMD6 COMM domain-containing protein 6 yes yes 0 1 1 By MS/MS 2 0 1 1 35.695 29.348 3 0.00071787 41076 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.92 56.783 17697000 17697000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29270 3096 26751 246112 195729 195729 4705 1 LGMAVSSDTCRSLK Unmodified 1523.7436 0.74359766 3096 Q7Z4G1 COMMD6 COMM domain-containing protein 6 yes yes 0 0 1 By MS/MS 2 0 1 1 50.929 42.967 3 0.00033605 59386 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.823 63.385 34192000 34192000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29271 3096 26751 246113 195730 195730 1 LGMENDDTAVQYAIGR Oxidation (M) 1767.8098 0.80976297 2111 Q05048 CSTF1 Cleavage stimulation factor subunit 1 yes yes 0 1 0 By MS/MS By MS/MS 10 0 3 2 1 63.04 62.846 2 4.9983E-08 71885 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 89.403 73.514 5910600 0 0 0 0 1789500 0 4121100 0 0 0 0 0 0 0 0 29272 2111 26752 246114;246115;246116 195731;195732 195731 3414 2 LGMENDDTAVQYAIGR Unmodified 1751.8148 0.81484835 2111 Q05048 CSTF1 Cleavage stimulation factor subunit 1 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 72.695 72.958 2 5.0853E-06 83487 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 99.522 83.633 9435000 0 0 0 0 0 0 0 0 0 0 0 0 0 2317600 7117500 29273 2111 26752 246117;246118;246119 195733;195734 195733 2 LGMEVNQPK Oxidation (M) 1030.5117 0.51173046 4490 Q9HAU5 UPF2 Regulator of nonsense transcripts 2 yes yes 0 1 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 16.829 17.031 2 0.013607 15832 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.937 33.16 21975000 0 0 0 1534600 1603300 0 1567200 1615800 0 2189300 2808000 3322100 2413800 2423100 2497700 29274 4490 26753 246120;246121;246122;246123;246124;246125;246126;246127;246128;246129 195735;195736 195735 5917 2 LGMGLVSR Unmodified 831.46366 0.46365805 3358 Q8N6H7 ARFGAP2 ADP-ribosylation factor GTPase-activating protein 2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 50.277 50.714 2 0.018722 56017 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.207 37.866 57538000 0 0 0 0 0 0 0 17984000 0 0 0 0 0 0 39554000 29275 3358 26754 246130;246131 195737;195738;195739 195737 3 LGMIDAFDEAK Unmodified 1208.5747 0.57472465 1623 P50452 SERPINB8 Serpin B8 yes yes 0 0 0 By MS/MS By matching By matching By matching 10 0 4 1 1 1 1 76.808 76.787 2 0.0096832 89113 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 50.284 40.89 12025000 0 0 0 5231900 0 0 0 0 0 2449500 0 2797400 1546600 0 0 29276 1623 26755 246132;246133;246134;246135 195740 195740 1 LGMLSPEGTCK Oxidation (M) 1207.5577 0.55769437 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 32.477 32.799 2 0.00059231 35100 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.465 41.17 67019000 0 0 0 0 0 11354000 6378100 0 2260100 11180000 9415700 8172200 5890200 0 12369000 29277 1565 26756 246136;246137;246138;246139;246140;246141;246142;246143;246144;246145 195741;195742;195743;195744;195745;195746;195747;195748 195747 2496 8 LGMLSPEGTCK Unmodified 1191.5628 0.56277975 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 48.007 48.154 2 4.3531E-05 53976 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 116.3 79.909 122610000 0 0 0 5879400 5379100 10991000 5797400 8870500 0 9987300 18680000 9946100 0 19056000 28028000 29278 1565 26756 246146;246147;246148;246149;246150;246151;246152;246153;246154;246155 195749;195750;195751;195752;195753;195754;195755;195756;195757;195758 195753 10 LGMNLMNELK 2 Oxidation (M) 1193.5784 0.57842982 2642 Q16890 TPD52L1 Tumor protein D53 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.57 3.06 5 23 2 1 2 1 2 2 2 2 2 2 2 2 2 2 2 48.191 47.287 2 0.00021617 53575 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 121.85 95.744 814410000 33850000 41280000 28013000 37007000 49516000 51789000 53390000 65280000 38786000 80117000 73233000 92564000 79503000 40357000 49725000 29279 2642 26757 246156;246157;246158;246159;246160;246161;246162;246163;246164;246165;246166;246167;246168;246169;246170;246171;246172;246173;246174;246175;246176;246177;246178;246179;246180;246181;246182;246183 195759;195760;195761;195762;195763;195764;195765;195766;195767;195768;195769;195770;195771;195772;195773;195774;195775;195776;195777;195778;195779;195780;195781;195782 195772 4297;4298 22 LGMNLMNELK Unmodified 1161.5886 0.58860057 2642 Q16890 TPD52L1 Tumor protein D53 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 80.859 79.786 2 0.0014072 92279 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 114.39 87.971 511080000 147080000 173630000 9137300 0 0 8208800 5616300 16466000 7157500 16816000 19121000 23266000 13367000 15759000 55460000 29280 2642 26757 246184;246185;246186;246187;246188;246189;246190;246191;246192;246193;246194;246195;246196 195783;195784;195785;195786;195787;195788;195789;195790;195791;195792;195793;195794 195794 12 LGMNLMNELK Oxidation (M) 1177.5835 0.58351519 2642 Q16890 TPD52L1 Tumor protein D53 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.96 2.69 3 20 1 1 1 1 1 3 2 1 3 3 2 2 2 67.063 66.536 2 8.9326E-06 89430 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 138.06 105.45 423060000 52261000 37492000 11414000 0 9168200 6789600 0 52760000 14992000 16069000 57079000 66765000 26997000 23866000 47410000 29281 2642 26757 246197;246198;246199;246200;246201;246202;246203;246204;246205;246206;246207;246208;246209;246210;246211;246212;246213;246214;246215;246216;246217;246218;246219 195795;195796;195797;195798;195799;195800;195801;195802;195803;195804;195805;195806;195807;195808 195799 4297;4298 13 LGMSADPDNEDATDK Unmodified 1577.6515 0.651531 464 O75152 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 34.295 34.399 2 4.1058E-05 36861 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.655 70.122 31594000 0 0 0 2931300 2780000 2979600 2808700 0 0 2449300 7403600 0 0 4000900 6241000 29282 464 26758 246220;246221;246222;246223;246224;246225;246226;246227 195809;195810;195811;195812;195813;195814 195811 6 LGMSADPDNEDATDK Oxidation (M) 1593.6464 0.64644562 464 O75152 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 19.181 19.345 2 0.0017712 19446 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 46.706 40.017 13881000 0 0 0 865520 1117000 999300 0 0 1062400 2156600 2104000 4213000 0 1363300 0 29283 464 26758 246228;246229;246230;246231;246232;246233;246234;246235 195815 195815 590 1 LGNAPAEVDEEGK Unmodified 1327.6256 0.62557424 652 O95391 SLU7 Pre-mRNA-splicing factor SLU7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 30.142 29.865 2 0.00024855 36647 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.734 72.175 109290000 0 14349000 0 7352700 5075400 6059600 7917500 7324900 7924100 9575900 0 16992000 0 9088500 17636000 29284 652 26759 246236;246237;246238;246239;246240;246241;246242;246243;246244;246245;246246;246247;246248 195816;195817;195818;195819;195820;195821;195822;195823;195824;195825;195826;195827;195828;195829 195819 14 LGNDFHTNK Unmodified 1044.4989 0.49885759 871 P08708 RPS17 40S ribosomal protein S17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.493 14.655 2 8.748E-80 13896 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 208.72 185.57 634860000 0 0 0 24758000 28537000 29331000 27438000 28488000 22758000 63026000 71954000 77738000 76872000 81275000 102680000 29285 871 26760 246249;246250;246251;246252;246253;246254;246255;246256;246257;246258;246259;246260 195830;195831;195832;195833;195834;195835;195836;195837;195838;195839;195840;195841 195839 12 LGNDFHTNKR Unmodified 1200.6 0.59996862 871 P08708 RPS17 40S ribosomal protein S17 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 10.654 10.785 3 0.0018484 8453 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 67.726 41.053 64926000 0 0 0 5587500 0 4654100 6436900 0 3291800 0 0 21912000 0 11738000 11306000 29286 871 26761 246261;246262;246263;246264;246265;246266;246267 195842;195843;195844;195845 195843 3 LGNFFSPK Unmodified 908.4756 0.47560295 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 61.966 60.71 2 0.0066594 69724 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 98.997 43.556 3543600000 490890000 216460000 67898000 208990000 182610000 307830000 196850000 143250000 190210000 254180000 261790000 277390000 236110000 198380000 310780000 29287 1518 26762 246268;246269;246270;246271;246272;246273;246274;246275;246276;246277;246278;246279;246280;246281;246282;246283;246284 195846;195847;195848;195849;195850;195851;195852;195853;195854;195855;195856;195857;195858;195859;195860;195861;195862;195863 195863 14 LGNFNLQDIEK Unmodified 1289.6616 0.66156582 2829 Q5VYS8 ZCCHC6 Terminal uridylyltransferase 7 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 79.767 75.725 2 0.020163 94287 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 59.013 17.584 26195000 0 26195000 0 0 0 0 0 0 0 0 0 0 0 0 0 29288 2829 26763 246285;246286 195864 195864 1 LGNFSYQK Unmodified 955.47633 0.47633123 3950 Q96PZ0 PUS7 Pseudouridylate synthase 7 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 41.394 36.359 2 0.021166 49901 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 109.01 41.978 280830000 168070000 99113000 13641000 0 0 0 0 0 0 0 0 0 0 0 0 29289 3950 26764 246287;246288;246289;246290 195865;195866;195867 195866 1 LGNFTKPEMK Unmodified 1163.6009 0.60087982 5102 Q9Y2H2 INPP5F Phosphatidylinositide phosphatase SAC2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 37.507 38.115 3 0.0067459 41056 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.37 37.371 41153000 0 0 0 0 0 0 0 0 0 0 0 18639000 9753900 0 12760000 29290 5102 26765 246291;246292;246293 195868;195869;195870 195868 3 LGNGSGAGGILDLLK Unmodified 1383.7722 0.7721789 5053 Q9UPP1 PHF8 Histone lysine demethylase PHF8 yes yes 0 0 0 By MS/MS 10 0 1 1 89.389 89.532 2 0.014349 103659 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.645 21.876 1784000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1784000 29291 5053 26766 246294 195871 195871 1 LGNHLEDRVNK Unmodified 1293.6789 0.67894722 3662 Q92793 CREBBP CREB-binding protein yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 18.428 18.639 3 0.0098405 17190 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.426 11.308 58010000 0 0 0 5855900 3399400 0 5092700 7447000 0 7394600 4696700 7176100 4342100 3798300 8807300 29292 3662 26767 246295;246296;246297;246298;246299;246300;246301;246302;246303;246304 195872;195873 195873 2 LGNIEFKPESR Unmodified 1288.6776 0.67755023 367 O43795 MYO1B Unconventional myosin-Ib yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.778 47.941 3 0.00029326 52697 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.76 46.898 233320000 0 0 0 13777000 18641000 21271000 19651000 13912000 13592000 21820000 25027000 29867000 19682000 16894000 19185000 29293 367 26768 246305;246306;246307;246308;246309;246310;246311;246312;246313;246314;246315;246316 195874;195875;195876;195877;195878;195879;195880;195881;195882;195883;195884;195885 195877 11 LGNLFLNEDLEVK Unmodified 1502.7981 0.7980593 1710 P53350 PLK1 Serine/threonine-protein kinase PLK1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 88.983 85.317 2 0.027048 106209 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.829 29.871 55577000 0 54676000 901400 0 0 0 0 0 0 0 0 0 0 0 0 29294 1710 26769 246317;246318 195886 195886 0 LGNLGEAK Unmodified 800.43922 0.43921744 2945 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog yes yes 0 0 0 By MS/MS 10 0 1 1 20.442 20.179 2 0.041524 20765 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 49.933 1.1459 21198000 0 0 0 0 21198000 0 0 0 0 0 0 0 0 0 0 29295 2945 26770 246319 195887 195887 1 LGNNCVFAPADVTSEK Unmodified 1720.809 0.80903469 4051 Q99714 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65.688 65.082 2 6.1263E-05 73983 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.326 66.137 328450000 0 245360000 2856800 4530300 3175400 4682700 3304900 3928900 4153400 5184200 10531000 11565000 8187700 7427500 13572000 29296 4051 26771 246320;246321;246322;246323;246324;246325;246326;246327;246328;246329;246330;246331;246332;246333 195888;195889;195890;195891;195892;195893;195894;195895;195896;195897;195898;195899;195900 195892 13 LGNPIVPLNIR Unmodified 1204.7292 0.72919187 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.684 80.745 2 0.0072061 93033 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.429 87.124 402170000 0 0 0 16405000 23075000 32181000 26702000 32336000 16553000 35043000 33175000 36499000 20675000 41623000 87905000 29297 1986 26772 246334;246335;246336;246337;246338;246339;246340;246341;246342;246343;246344;246345 195901;195902 195901 0 LGNQTLKPDGQK Unmodified 1297.699 0.69901396 2893 Q6MZP7 LIN54 Protein lin-54 homolog yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17.653 17.263 3 0.024365 22467 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 35.006 20.997 131200000 24834000 0 5410100 7057600 6325200 9405600 6307700 6433600 4854500 7859500 8966400 11869000 9884900 7793700 14202000 29298 2893 26773 246346;246347;246348;246349;246350;246351;246352;246353;246354;246355;246356;246357;246358;246359 195903;195904 195903 1 LGNSHQPEK Unmodified 1008.4989 0.49885759 1614 P49959 MRE11A Double-strand break repair protein MRE11A yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 6.0411 3.2225 2 0.0070244 5182 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 102.62 53.866 46588000 32224000 0 14364000 0 0 0 0 0 0 0 0 0 0 0 0 29299 1614 26774 246360;246361 195905;195906 195905 2 LGNSLLLK Unmodified 856.5382 0.53820321 2179 Q10570 CPSF1 Cleavage and polyadenylation specificity factor subunit 1 yes yes 0 0 0 By MS/MS 10 0 1 1 54.645 55.27 2 0.025413 62356 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 58.716 5.5532 9762500 0 0 0 0 0 0 0 0 0 0 0 9762500 0 0 0 29300 2179 26775 246362 195907 195907 1 LGNTECHPEQFLER Unmodified 1728.789 0.78896795 4955 Q9UK61 FAM208A Protein FAM208A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.957 37.139 2 0.020299 40665 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 35.511 15.749 73190000 0 0 0 5005600 6555200 3844100 4176000 4869800 2649600 7492900 9715000 8088000 5607900 5414900 9770600 29301 4955 26776 246363;246364;246365;246366;246367;246368;246369;246370;246371;246372;246373;246374 195908 195908 1 LGNTISSLFGGGTTPDAK Unmodified 1734.8788 0.87882882 5206 Q9Y4L1 HYOU1 Hypoxia up-regulated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 81.984 81.009 2 1.1629E-32 93827 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 120.14 79.639 326400000 56472000 62429000 5486100 5700600 7544500 16200000 10067000 10045000 11307000 20232000 21321000 27908000 12215000 12944000 46527000 29302 5206 26777 246375;246376;246377;246378;246379;246380;246381;246382;246383;246384;246385;246386;246387;246388;246389;246390 195909;195910;195911;195912;195913;195914;195915;195916;195917;195918;195919;195920;195921;195922;195923 195909 15 LGNTTVICGVK Unmodified 1160.6223 0.62234354 3749 Q96B26 EXOSC8 Exosome complex component RRP43 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 47.299 45.977 2 0.00052375 59161 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 111.06 80.894 113880000 20186000 66743000 0 0 0 4199700 1647400 0 2810200 3763300 4051500 5662300 0 4821500 0 29303 3749 26778 246391;246392;246393;246394;246395;246396;246397;246398;246399;246400;246401 195924;195925;195926;195927;195928;195929;195930;195931;195932;195933 195926 10 LGNYAGAVQDCER Unmodified 1451.6463 0.64632646 364 O43765 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 39.273 38.626 2 1.5302E-07 42971 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 97.734 81.536 80475000 0 23304000 0 2921100 1861400 0 0 4380300 2065300 3734300 12799000 7584000 4209500 7490400 10126000 29304 364 26779 246402;246403;246404;246405;246406;246407;246408;246409;246410;246411;246412;246413;246414 195934;195935;195936;195937;195938;195939;195940;195941;195942;195943;195944;195945;195946 195940 13 LGNYAGAVQDCERAICIDPAYSK Unmodified 2570.1894 0.18935705 364 O43765 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 78.802 73.391 3 0.00022453 91079 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 56.247 52.443 28651000 11210000 0 17441000 0 0 0 0 0 0 0 0 0 0 0 0 29305 364 26780 246415;246416 195947;195948 195948 2 LGNYTLK Unmodified 807.44905 0.44905385 28 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 39.649 33.853 2 0.01448 46821 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 120.65 55.382 286380000 149570000 136810000 0 0 0 0 0 0 0 0 0 0 0 0 0 29306 28 26781 246417;246418 195949;195950 195950 2 LGPAALHALGAR Unmodified 1145.6669 0.66692597 4196 Q9BVQ7 SPATA5L1 Spermatogenesis-associated protein 5-like protein 1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 57.27 57.38 3 0.00043149 65310 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 69.721 58.127 29247000 0 0 0 3002100 2664000 2651300 0 0 2803000 2572300 3059300 3286500 4500800 0 4708100 29307 4196 26782 246419;246420;246421;246422;246423;246424;246425;246426;246427 195951;195952;195953;195954;195955 195951 5 LGPAEVWTSR Unmodified 1114.5771 0.57710791 3617 Q92540 SMG7 Protein SMG7 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 61.249 61.398 2 0.011956 70095 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 53.327 25.118 25373000 0 0 0 0 2654700 0 4009500 0 0 4959900 4236800 0 0 4164600 5347200 29308 3617 26783 246428;246429;246430;246431;246432;246433 195956;195957;195958 195956 3 LGPALATGNVVVMK Oxidation (M) 1384.7748 0.77482144 796 P05091 ALDH2 Aldehyde dehydrogenase, mitochondrial yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 65.699 65.446 2 0.0066602 75594 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 40.496 25.83 9210400 0 0 0 4576700 0 0 0 4633700 0 0 0 0 0 0 0 29309 796 26784 246434;246435 195959 195959 962 1 LGPASAADTGSEAK Unmodified 1273.615 0.61500956 4739 Q9NYB0 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 24.517 24.602 2 0.0014672 26426 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 58.172 33.249 41413000 0 0 0 3717000 6516000 5827200 0 0 4856800 6270500 6578500 0 7646800 0 0 29310 4739 26785 246436;246437;246438;246439;246440;246441;246442;246443;246444;246445 195960;195961;195962;195963;195964;195965;195966;195967;195968 195960 9 LGPASAADTGSEAKPGALAEGAAEPEPQR Unmodified 2747.3362 0.33621552 4739 Q9NYB0 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 56.435 56.471 3 2.362E-52 63610 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 104.51 99.889 49626000 0 0 0 4212500 5115900 0 4802000 6515100 0 5292000 14038000 0 0 0 9650200 29311 4739 26786 246446;246447;246448;246449;246450;246451;246452 195969;195970;195971;195972;195973;195974;195975 195971 7 LGPDDPNVAK Unmodified 1024.5189 0.51892433 4321;2143 Q9H0B6;Q07866 KLC2;KLC1 Kinesin light chain 2;Kinesin light chain 1 no no 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.6 3.67 3 7 1 1 1 1 1 1 1 1 1 1 30.753 29.377 2 0.0029937 32396 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 78.113 52.174 568600000 13959000 242350000 8119500 40568000 32901000 43076000 45153000 0 34923000 0 62879000 0 0 44670000 0 29312 4321;2143 26787 246453;246454;246455;246456;246457;246458;246459;246460;246461;246462 195976;195977;195978;195979;195980;195981 195977 6 LGPGAGAGFGVLR Unmodified 1170.6509 0.65094155 4164 Q9BUL5 PHF23 PHD finger protein 23 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 73.113 73.483 2 0.0031318 84145 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.451 46.528 19414000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19414000 29313 4164 26788 246463;246464;246465;246466;246467;246468;246469;246470;246471 195982;195983;195984;195985;195986;195987;195988;195989;195990 195983 9 LGPISPPQPPSVSAWNK Unmodified 1773.9414 0.94136949 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.57 80.631 2 0.0017215 92334 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 55.261 42.281 81473000 0 0 0 1784800 3910600 6984600 3800600 5756700 6146400 7706200 6616400 12287000 6684300 7302400 12493000 29314 5216 26789 246472;246473;246474;246475;246476;246477;246478;246479;246480;246481;246482;246483 195991;195992;195993;195994;195995;195996 195995 6 LGPLLLDPSLAVR Unmodified 1362.8235 0.82348619 3100 Q7Z4Q2 HEATR3 HEAT repeat-containing protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 91.073 91.146 2 0.0036808 105766 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 64.297 62.143 58387000 0 0 0 993570 1451700 5552600 2442600 3114200 3323100 7847300 5532900 6467800 4121000 4509000 13031000 29315 3100 26790 246484;246485;246486;246487;246488;246489;246490;246491;246492;246493;246494;246495 195997;195998;195999;196000;196001;196002;196003;196004;196005;196006;196007 195998 11 LGPNGERSAELLLGK Unmodified 1552.8573 0.85730551 3061 Q7LBC6 KDM3B Lysine-specific demethylase 3B yes yes 0 0 1 By MS/MS 2 0 1 1 75.203 67.072 3 0.0039743 88410 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.186 41.773 20437000 20437000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29316 3061 26791 246496 196008 196008 1 LGPNSETDHVTPMISK Unmodified 1724.8403 0.84033482 566 O75962 TRIO Triple functional domain protein yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 55.862 51.003 3 0.0053516 66182 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 43.297 26.991 43727000 0 35335000 8392100 0 0 0 0 0 0 0 0 0 0 0 0 29317 566 26792 246497;246498 196009;196010;196011 196009 3 LGPNSETDHVTPMISK Oxidation (M) 1740.8352 0.83524944 566 O75962 TRIO Triple functional domain protein yes yes 0 1 0 By MS/MS 3 0 1 1 47.807 42.931 3 0.0019587 53235 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 52.172 32.849 9710000 0 9710000 0 0 0 0 0 0 0 0 0 0 0 0 0 29318 566 26792 246499 196012 196012 727 1 LGPNTNPSEGLGPLPNPTANK Unmodified 2087.0647 0.064732107 3479 Q8TB72 PUM2 Pumilio homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 19 2 3 2 2 2 2 2 2 2 74.684 74.72 2;3 1.5125E-05 85759 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.74 49.648 95740000 0 0 0 5222500 10533000 0 10140000 10593000 0 0 10432000 12905000 10485000 9002300 16429000 29319 3479 26793 246500;246501;246502;246503;246504;246505;246506;246507;246508;246509;246510;246511;246512;246513;246514;246515;246516;246517;246518 196013;196014;196015;196016;196017;196018;196019 196016 7 LGPPDVYPQDPK Unmodified 1324.6663 0.66631685 3709 Q93074;Q86YW9 MED12;MED12L Mediator of RNA polymerase II transcription subunit 12;Mediator of RNA polymerase II transcription subunit 12-like protein yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 57.214 57.336 2 0.0046235 65070 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 58.37 41.344 60508000 0 0 0 6438200 0 6852400 6074600 7369400 5125700 6541300 10311000 0 0 0 11796000 29320 3709 26794 246519;246520;246521;246522;246523;246524;246525;246526 196020;196021 196020 2 LGPPPEPPGGLCHGHPQPQVH Unmodified 2207.0694 0.069440329 2042 Q00653 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.87 3.84 5 1 9 3 3 1 1 1 1 1 1 1 1 1 54.061 51.977 3;4 7.4869E-09 71086 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.8 82.09 623530000 432110000 0 62296000 0 5520300 0 8723200 16708000 0 13332000 13484000 20432000 12085000 11770000 27071000 29321 2042 26795 246527;246528;246529;246530;246531;246532;246533;246534;246535;246536;246537;246538;246539;246540;246541 196022;196023;196024;196025;196026;196027;196028;196029;196030;196031 196028 9 LGPQASSQVVMPPLVR Unmodified 1677.9236 0.92361094 3208 Q86YP4 GATAD2A Transcriptional repressor p66-alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 80.632 80.68 2 2.6287E-06 92954 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 99.531 94.035 55334000 0 0 0 2297200 2447200 3840800 2639500 3595000 3255000 7197500 0 7404400 4446100 5152300 13059000 29322 3208 26796 246542;246543;246544;246545;246546;246547;246548;246549;246550;246551;246552 196032;196033;196034;196035;196036;196037;196038;196039;196040;196041;196042 196035 11 LGPQASSQVVMPPLVR Oxidation (M) 1693.9185 0.91852556 3208 Q86YP4 GATAD2A Transcriptional repressor p66-alpha yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 71.329 71.397 2 0.00071033 82846 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 54.471 47.811 30684000 0 0 0 3768800 0 0 0 4282700 0 5696700 5404000 6623200 4908500 0 0 29323 3208 26796 246553;246554;246555;246556;246557;246558 196043;196044;196045 196045 4827 3 LGPQDSDPTEANLESADPELCIR Unmodified 2526.1544 0.15441133 2646 Q27J81 INF2 Inverted formin-2 yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 79.388 79.548 3 0.00023045 92083 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 24.454 21.613 23612000 0 0 0 0 0 0 0 0 0 0 0 6298400 5912000 0 11401000 29324 2646 26797 246559;246560;246561 196046;196047 196047 2 LGPRPVPPPRPESTGTVGPGQAQQR Unmodified 2578.3728 0.37281622 3588 Q8WXE0 CASKIN2 Caskin-2 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 45.816 46.07 4 1.8336E-19 50578 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.352 63.32 133510000 0 0 0 0 6915200 0 11812000 16906000 11346000 13396000 15974000 14400000 12434000 9105000 21222000 29325 3588 26798 246562;246563;246564;246565;246566;246567;246568;246569;246570;246571 196048;196049;196050;196051;196052;196053;196054;196055;196056;196057 196050 10 LGPVPQPPAPQDEPVFAQLK Unmodified 2127.1364 0.13644049 2351 Q13887 KLF5 Krueppel-like factor 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 1 2 2 2 2 2 2 2 2 85.681 85.802 2;3 6.8809E-10 98742 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 72.958 67.679 102600000 0 0 0 0 2815700 7920200 0 8604900 9581000 11524000 12554000 12114000 7463800 8872400 21150000 29326 2351 26799 246572;246573;246574;246575;246576;246577;246578;246579;246580;246581;246582;246583;246584;246585;246586;246587;246588;246589 196058;196059;196060;196061;196062;196063;196064;196065;196066;196067;196068;196069;196070;196071;196072;196073;196074;196075;196076 196069 18 LGPVPSGLSQK Unmodified 1081.6132 0.61315906 4486 Q9HAH7 FBRS Probable fibrosin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 50.071 50.095 2 0.011889 56683 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 48.091 30.105 48579000 0 0 0 7311800 5512200 0 7309900 0 0 0 0 0 9218800 7567700 11658000 29327 4486 26800 246590;246591;246592;246593;246594;246595 196077;196078;196079;196080 196077 4 LGPVPSSTIEPAEAQSASSDLPQNVTK Unmodified 2722.3661 0.36611866 2786 Q5T8P6 RBM26 RNA-binding protein 26 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.899 76.938 3 7.433E-05 88794 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 31.127 25.097 47088000 0 0 0 1897200 3926300 4182000 4166400 4134000 3267100 5434600 4684300 6764200 3234700 5397300 0 29328 2786 26801 246596;246597;246598;246599;246600;246601;246602;246603;246604;246605;246606 196081;196082;196083;196084;196085;196086;196087;196088 196086 8 LGPYVDHYYR Unmodified 1281.6142 0.6142217 4345 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 47.48 47.741 3 0.016765 53857 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 38.634 33.536 39121000 0 0 0 0 0 8734000 3007800 0 3420900 0 0 0 6614800 5893000 11450000 29329 4345 26802 246607;246608;246609;246610;246611;246612 196089;196090;196091 196089 3 LGQALTEVYAK Unmodified 1191.6499 0.6499385 2033 Q00341 HDLBP Vigilin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 57.632 56.305 2 2.5509E-05 76417 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 143.04 78.617 2086900000 184480000 1091600000 115050000 33245000 31860000 55262000 46019000 42197000 33985000 76193000 76047000 83729000 49642000 54038000 113520000 29330 2033 26803 246613;246614;246615;246616;246617;246618;246619;246620;246621;246622;246623;246624;246625;246626;246627;246628 196092;196093;196094;196095;196096;196097;196098;196099;196100;196101;196102;196103;196104;196105;196106;196107;196108;196109 196100 12 LGQDEDMDVK Unmodified 1148.502 0.50195363 1272 P30154 PPP2R1B Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 29.282 28.756 2 0.0089104 35758 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.18 82.75 89150000 0 51633000 0 0 0 0 0 0 0 0 8561500 0 8126300 6591600 14237000 29331 1272 26804 246629;246630;246631;246632;246633 196110;196111 196110 1 LGQDEDMDVK Oxidation (M) 1164.4969 0.49686826 1272 P30154 PPP2R1B Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform yes yes 0 1 0 By MS/MS By matching By matching By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 15.365 15.55 2 0.024932 15061 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 40.724 28.955 11791000 0 0 0 0 1155000 1051300 0 576970 0 0 0 3230800 2552700 0 3224400 29332 1272 26804 246634;246635;246636;246637;246638;246639 196112 196112 1 LGQDRPIK Unmodified 925.53451 0.53451481 4270 Q9BZK7 TBL1XR1 F-box-like/WD repeat-containing protein TBL1XR1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 11.823 11.973 2 0.042099 11151 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 113.26 36.409 234790000 0 0 0 9911500 10928000 12158000 12595000 13903000 12021000 21118000 13232000 38088000 28212000 28459000 34162000 29333 4270 26805 246640;246641;246642;246643;246644;246645;246646;246647;246648;246649;246650;246651 196113;196114 196113 0 LGQDSLTPEQVAWR Unmodified 1598.8053 0.80526994 3155 Q86UU0 BCL9L B-cell CLL/lymphoma 9-like protein yes yes 0 0 0 By MS/MS 10 0 1 1 73.246 73.616 2 0.00059608 84325 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.155 73.183 9790200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9790200 29334 3155 26806 246652 196115 196115 1 LGQDSLTPEQVAWRK Unmodified 1726.9002 0.90023296 3155 Q86UU0 BCL9L B-cell CLL/lymphoma 9-like protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.398 62.494 3 0.0014854 71325 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 43.184 38.715 182310000 0 0 0 7882500 6661400 8387100 9060300 16688000 11301000 14570000 19102000 26994000 13942000 15636000 32089000 29335 3155 26807 246653;246654;246655;246656;246657;246658;246659;246660;246661;246662;246663;246664 196116;196117;196118;196119;196120;196121;196122;196123;196124;196125;196126 196116 11 LGQEATVGK Unmodified 901.4869 0.48689592 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 14.507 14.616 2 0.0041698 13263 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.696 45.804 4222000000 0 0 0 328260000 0 0 1784000000 1966000000 0 0 0 0 0 0 143740000 29336 1714 26808 246665;246666;246667;246668 196127;196128;196129;196130 196128 1 LGQERDPGGITAGSTDEPPMLTK Unmodified 2369.1533 0.15328912 3555 Q8WUZ0 BCL7C B-cell CLL/lymphoma 7 protein family member C yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 63.705 63.793 3 2.8672E-10 72325 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.217 49.159 32918000 0 0 0 3451400 0 0 3702800 0 3745600 0 0 0 5475600 7278400 9263800 29337 3555 26809 246669;246670;246671;246672;246673;246674 196131;196132;196133;196134 196132 4 LGQGAHHAAGQAGK Unmodified 1301.6589 0.65888048 2981 Q6UWP8 SBSN Suprabasin yes yes 0 0 0 By MS/MS 10 0 1 1 5.5349 5.4116 3 0.018641 3201 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 20.806 0 21608000 0 0 0 21608000 0 0 0 0 0 0 0 0 0 0 0 29338 2981 26810 246675 196135 196135 1 LGQGIGPIHLNEIQCTGNEK Unmodified 2177.0899 0.089901 5205 Q9Y4K0 LOXL2 Lysyl oxidase homolog 2 yes yes 0 0 0 By MS/MS 2 0 1 1 61.265 53.024 3 0.01543 71857 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 16.487 1.5586 8895100 8895100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29339 5205 26811 246676 196136;196137 196136 2 LGQGVLVQVSPSLVK Unmodified 1522.9083 0.90827845 2349 Q13868 EXOSC2 Exosome complex component RRP4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.24 2 1 10 1 2 1 1 1 1 1 1 1 1 1 1 81.877 80.708 2 1.4673E-30 100874 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.82 115.4 90478000 16310000 21971000 0 0 2794900 4174200 0 2907700 2395400 5799800 6180200 6423700 2809600 4601200 14110000 29340 2349 26812 246677;246678;246679;246680;246681;246682;246683;246684;246685;246686;246687;246688;246689 196138;196139;196140;196141;196142;196143;196144;196145;196146;196147;196148;196149;196150 196140 13 LGQGVNHAADQAGK Unmodified 1364.6797 0.6796755 2981 Q6UWP8 SBSN Suprabasin yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 12.746 12.932 3 0.0011709 12020 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 50.843 35.456 68372000 0 0 0 34737000 0 0 7276200 10906000 0 0 5384100 0 6508500 0 3560700 29341 2981 26813 246690;246691;246692;246693;246694;246695 196151;196152 196151 2 LGQHVVGMAPLSVGSLDDEPGGEAETK Oxidation (M) 2708.2963 0.29632454 1483 P43897 TSFM Elongation factor Ts, mitochondrial yes yes 0 1 0 By MS/MS By matching By matching By matching 10 0 4 1 1 1 1 71.796 71.997 3 2.108E-18 82867 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 62.237 58.669 18998000 0 0 0 0 0 5572000 0 0 0 0 3360300 0 0 3386900 6678600 29342 1483 26814 246696;246697;246698;246699 196153 196153 2331 1 LGQMDTK Unmodified 791.38474 0.38473903 3609 Q92503;O43304 SEC14L1;SEC14L5 SEC14-like protein 1;SEC14-like protein 5 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 11.148 11.265 2 0.023398 10031 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 87.284 21.146 20868000 0 0 0 0 4881500 0 0 7557400 0 3495600 0 4933300 0 0 0 29343 3609 26815 246700;246701;246702;246703 196154;196155 196154 2 LGQMIVDYENPLK Oxidation (M) 1534.7701 0.77012999 5094 Q9Y2A7 NCKAP1 Nck-associated protein 1 yes yes 0 1 0 By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 73.536 73.706 2 0.0019164 85026 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 56.359 48.979 49032000 0 0 0 0 0 7951400 5940500 5627900 5982700 5993700 10266000 0 0 0 7269200 29344 5094 26816 246704;246705;246706;246707;246708;246709;246710;246711 196156;196157;196158;196159 196158 6492 3 LGQMVLSGVDTVLGK Oxidation (M) 1531.828 0.82797922 421 O60664 PLIN3 Perilipin-3 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 81.038 81.102 2 1.5386E-63 93849 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 182.71 164.66 200080000 0 0 0 4625400 7497100 0 9712000 14955000 16107000 29567000 26881000 27056000 8695700 14084000 40901000 29345 421 26817 246712;246713;246714;246715;246716;246717;246718;246719;246720;246721;246722 196160;196161;196162;196163;196164;196165;196166;196167;196168;196169 196160 529 2 LGQNGTAITFINNNSK Unmodified 1690.8638 0.86384745 2769 Q5T1V6 DDX59 Probable ATP-dependent RNA helicase DDX59 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 65.561 65.858 2 0.00053835 74608 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 62.14 44.704 27952000 0 0 0 0 0 0 0 0 0 4471700 4435000 7000100 2719000 3056000 6269800 29346 2769 26818 246723;246724;246725;246726;246727;246728 196170;196171;196172;196173;196174;196175 196173 5 LGQPLLNENPQLSEGWEIPK Unmodified 2261.1692 0.16919718 2912 Q6NZY4 ZCCHC8 Zinc finger CCHC domain-containing protein 8 yes yes 0 0 0 By MS/MS 2 0 1 1 91.749 86.839 2 1.4647E-12 107869 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.86 102.56 33480000 0 33480000 0 0 0 0 0 0 0 0 0 0 0 0 0 29347 2912 26819 246729 196176 196176 1 LGQSDPAPLQHQMDIYQK Unmodified 2068.0048 0.004774387 1249 P29401 TKT Transketolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.21 62.307 3 2.0821E-37 70941 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 124.91 105.62 1205300000 0 0 0 12891000 4973400 13885000 8237300 18635000 6498100 19425000 145160000 140600000 13092000 123330000 698620000 29348 1249 26820 246730;246731;246732;246733;246734;246735;246736;246737;246738;246739;246740;246741 196177;196178;196179;196180;196181;196182;196183;196184;196185;196186;196187;196188;196189 196188 13 LGQSDPAPLQHQMDIYQK Oxidation (M) 2083.9997 0.99968901 1249 P29401 TKT Transketolase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 48.28 48.52 3 2.1656E-11 54008 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 86.8 78.305 816540000 0 0 0 21092000 0 0 14752000 15073000 7967700 0 153400000 130210000 0 118150000 355910000 29349 1249 26820 246742;246743;246744;246745;246746;246747;246748;246749 196190;196191;196192;196193;196194;196195;196196;196197 196196 1840 8 LGQSESQGPPR Unmodified 1154.568 0.56799978 131 O00233 PSMD9 26S proteasome non-ATPase regulatory subunit 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.013 15.184 2 9.5382E-11 14494 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 151.44 134.06 198540000 0 0 0 9291900 8953000 7608800 12162000 8275000 7306000 12664000 33369000 28320000 14178000 20342000 36071000 29350 131 26821 246750;246751;246752;246753;246754;246755;246756;246757;246758;246759;246760;246761 196198;196199;196200;196201;196202;196203;196204;196205;196206;196207;196208;196209 196201 10 LGQSESQGPPRAFAK Unmodified 1571.8056 0.80560429 131 O00233 PSMD9 26S proteasome non-ATPase regulatory subunit 9 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 39.109 34.052 3 2.1903E-05 47164 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 99.161 85.444 175320000 173880000 0 1437000 0 0 0 0 0 0 0 0 0 0 0 0 29351 131 26822 246762;246763 196210;196211 196211 2 LGQSIESSYSSIQK Unmodified 1525.7624 0.76240208 4946 Q9UJX5 ANAPC4 Anaphase-promoting complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.86 3.4 1 1 5 2 1 1 1 1 1 53.75 51.269 2 5.2707E-39 66145 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 163.78 149.57 179640000 0 141040000 0 0 0 13441000 0 0 0 0 0 0 0 0 25166000 29352 4946 26823 246764;246765;246766;246767;246768;246769;246770 196212;196213;196214;196215;196216;196217;196218;196219;196220 196217 9 LGQSVTTIPTVGFNVETVTYK Unmodified 2253.1893 0.18926392 1897 P62330 ARF6 ADP-ribosylation factor 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 87.49 87.619 3 3.3216E-08 108378 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 45.992 36.808 7337200 0 0 0 0 0 0 0 0 0 3235300 0 0 0 0 4102000 29353 1897 26824 246771;246772;246773 196221;196222;196223 196222 3 LGQYIRLVEPGSPAEK Unmodified 1755.9519 0.95193418 209 O14745 SLC9A3R1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 yes yes 0 0 1 By MS/MS 2 0 1 1 78.778 70.647 3 1.8297E-23 92979 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 122.75 95.716 60877000 60877000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29354 209 26825 246774 196224 196224 1 LGRCESQSTLDPGAGEAR Unmodified 1902.8854 0.88538753 2584 Q15818 NPTX1 Neuronal pentraxin-1 yes yes 0 0 1 By MS/MS 10 0 1 1 30.803 31.271 3 0.013389 33844 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 29.582 18.303 4692400 0 0 0 0 0 0 0 0 0 0 4692400 0 0 0 0 29355 2584 26826 246775 196225 196225 1 LGRDHELGAPPK Unmodified 1288.6888 0.68878362 512 O75528 TADA3 Transcriptional adapter 3 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 21.02 21.165 3 0.044739 21220 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 27.098 10.156 69660000 0 0 0 3842400 5381600 5772900 5899100 4482900 3939000 9188000 7799700 19279000 0 4075300 0 29356 512 26827 246776;246777;246778;246779;246780;246781;246782;246783;246784;246785 196226 196226 1 LGREEPAMSMDANGK Unmodified 1604.7287 0.72867588 1358 P35606 COPB2 Coatomer subunit beta' yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35.903 35.033 3 5.7886E-05 44084 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 69.403 64.512 322430000 9011000 76888000 43607000 5973200 4458600 11163000 9177000 10601000 14693000 17505000 24139000 19254000 16597000 18378000 40983000 29357 1358 26828 246786;246787;246788;246789;246790;246791;246792;246793;246794;246795;246796;246797;246798;246799;246800 196227;196228;196229;196230;196231;196232;196233;196234;196235;196236;196237;196238 196233 9 LGREEPAMSMDANGK Oxidation (M) 1620.7236 0.7235905 1358 P35606 COPB2 Coatomer subunit beta' yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 25.394 21.812 3 0.0002202 27816 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 75.968 67.584 56427000 0 19288000 37139000 0 0 0 0 0 0 0 0 0 0 0 0 29358 1358 26828 246801;246802 196239;196240;196241 196241 2102;2103 3 LGREEPAMSMDANGK 2 Oxidation (M) 1636.7185 0.71850513 1358 P35606 COPB2 Coatomer subunit beta' yes yes 0 2 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 8.48 3.14 4 17 1 1 2 2 2 1 2 1 2 2 2 1 1 1 11.89 11.4 3 0.00026656 9728 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 63.29 56.251 213080000 13779000 20368000 110720000 5337500 3784400 2486800 7241600 3703900 6194400 8944600 0 14074000 5851400 5293500 5300600 29359 1358 26828 246803;246804;246805;246806;246807;246808;246809;246810;246811;246812;246813;246814;246815;246816;246817;246818;246819;246820;246821;246822;246823 196242;196243;196244;196245 196245 2102;2103 1 LGRETEEQDSDSAEQGDPAGEGK Unmodified 2404.0262 0.026233928 646 O95361 TRIM16 Tripartite motif-containing protein 16 yes yes 0 0 1 By MS/MS 2 0 1 1 24.531 19.453 3 1.1314E-06 27685 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.832 63.726 16347000 16347000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29360 646 26829 246824 196246 196246 1 LGRLDAVLQR Unmodified 1139.6775 0.67749065 1253 P29590 PML Protein PML yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 54.838 55.042 3 0.0061398 62126 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 58.37 12.212 81362000 0 0 0 0 2179700 7450800 5612700 6692800 5073200 9107100 7499300 10945000 8875000 5615700 12310000 29361 1253 26830 246825;246826;246827;246828;246829;246830;246831;246832;246833;246834;246835 196247;196248;196249;196250;196251;196252;196253;196254;196255;196256;196257 196249 11 LGRLDQAVLDLQR Unmodified 1495.8471 0.84707518 4387 Q9H3U1 UNC45A Protein unc-45 homolog A yes yes 0 0 1 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 73.915 74.131 3 0.0045235 84866 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.657 27.315 15300000 0 0 0 0 0 0 0 0 2404500 2943900 0 2526500 0 0 7425000 29362 4387 26831 246836;246837;246838;246839 196258 196258 1 LGRLQVDSAEYGCLK Unmodified 1707.8614 0.86140461 922 P10588 NR2F6 Nuclear receptor subfamily 2 group F member 6 yes yes 0 0 1 By MS/MS 2 0 1 1 69.98 61.695 3 0.0012085 82258 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.894 52.947 8239400 8239400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29363 922 26832 246840 196259 196259 1 LGRTIADHCPDSACK Unmodified 1699.777 0.77702306 1340 P35221 CTNNA1 Catenin alpha-1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 4 3 1 27.812 22.608 2;3;4 1.882E-05 31800 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.18 79.847 199110000 186180000 12932000 0 0 0 0 0 0 0 0 0 0 0 0 0 29364 1340 26833 246841;246842;246843;246844 196260;196261;196262 196261 2 LGSAADFLLDISETDLSSLTASIK Unmodified 2466.2741 0.27411576 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 4 2 3 3 103.59 98.102 2;3 6.4993E-68 122942 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 173.58 160.75 92077000 61103000 30974000 0 0 0 0 0 0 0 0 0 0 0 0 0 29365 487 26834 246845;246846;246847;246848;246849;246850 196263;196264;196265;196266;196267 196267 5 LGSAEEFNYTR Unmodified 1285.5939 0.59388018 4580 Q9NQX4 MYO5C Unconventional myosin-Vc yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.908 48.071 2 1.4613E-07 54006 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 147.4 123.25 74614000 0 0 0 4175300 6348300 5769400 4836100 4533700 5902700 6261800 7604200 7229100 9229100 5577200 7147200 29366 4580 26835 246851;246852;246853;246854;246855;246856;246857;246858;246859;246860;246861;246862 196268;196269;196270;196271;196272;196273;196274;196275;196276;196277;196278;196279;196280;196281 196274 14 LGSAGGTDFSMK Oxidation (M) 1185.5336 0.53358811 4387 Q9H3U1 UNC45A Protein unc-45 homolog A yes yes 0 1 0 By MS/MS By MS/MS 2 0 4 2 2 31.207 27.365 2 9.1606E-07 36115 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.93 86.19 167460000 0 163170000 4285700 0 0 0 0 0 0 0 0 0 0 0 0 29367 4387 26836 246863;246864;246865;246866 196282;196283 196283 5844 2 LGSAGGTDFSMK Unmodified 1169.5387 0.53867349 4387 Q9H3U1 UNC45A Protein unc-45 homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 47.312 44.364 2 0.0031927 57292 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.568 82.792 203680000 0 178610000 2152400 0 0 0 0 0 0 0 0 0 0 0 22918000 29368 4387 26836 246867;246868;246869 196284;196285;196286 196284 3 LGSASQAGPPGSSR Unmodified 1270.6266 0.6265773 4793 Q9P0K8 FOXJ2 Forkhead box protein J2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.139 18.327 2 0.00036794 17907 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 74.944 63.581 41414000 0 0 0 2990100 3577200 2367100 3701200 4353400 1832000 3626700 4022100 4160600 3666200 2890100 4226700 29369 4793 26837 246870;246871;246872;246873;246874;246875;246876;246877;246878;246879;246880;246881 196287;196288;196289;196290;196291;196292;196293;196294;196295 196291 8 LGSASQAGPPGSSRK Unmodified 1398.7215 0.72154031 4793 Q9P0K8 FOXJ2 Forkhead box protein J2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.67 1.6 1 23 1 2 2 2 2 2 2 2 1 2 2 2 2 11.644 11.598 2;3 0.0013732 11171 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 43.592 33.804 274420000 5184500 0 0 19134000 17276000 20242000 18185000 21182000 16365000 23092000 15144000 29932000 24970000 22513000 41198000 29370 4793 26838 246882;246883;246884;246885;246886;246887;246888;246889;246890;246891;246892;246893;246894;246895;246896;246897;246898;246899;246900;246901;246902;246903;246904;246905 196296;196297;196298;196299;196300;196301;196302;196303;196304;196305;196306;196307;196308 196297 10 LGSDFGSSR Unmodified 924.43011 0.43010932 3108 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 23.315 23.568 2 0.017806 24300 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 55.37 28.249 41445000 0 0 0 2855300 0 2540100 3682400 2444700 1849300 4468000 5062600 4657900 3841900 3644200 6398300 29371 3108 26839 246906;246907;246908;246909;246910;246911;246912;246913;246914;246915;246916 196309;196310;196311;196312;196313 196310 5 LGSDLTSAQK Unmodified 1018.5295 0.52948901 2155 Q08378 GOLGA3 Golgin subfamily A member 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 23.229 23.463 2 0.00052843 23638 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 126.82 63.523 48392000 0 0 0 4786100 0 3776600 5661500 0 0 0 8670900 0 7361300 5114200 13022000 29372 2155 26840 246917;246918;246919;246920;246921;246922;246923 196314;196315;196316;196317;196318;196319;196320 196316 6 LGSFPVR Unmodified 774.43882 0.43882351 3548 Q8WUM0 NUP133 Nuclear pore complex protein Nup133 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 45.195 45.359 2 0.020823 50899 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 107.74 30.025 51352000 0 0 0 6148200 0 7973900 0 5436400 0 8882900 0 0 7874000 6817600 8218900 29373 3548 26841 246924;246925;246926;246927;246928;246929;246930 196321;196322;196323;196324;196325 196321 5 LGSGEPSHSVK Unmodified 1096.5513 0.55128709 636 O95260 ATE1 Arginyl-tRNA--protein transferase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 12.418 9.2943 2 0.00047103 14201 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 100.25 55.553 36433000 18636000 0 17797000 0 0 0 0 0 0 0 0 0 0 0 0 29374 636 26842 246931;246932;246933 196326;196327;196328;196329 196327 4 LGSGPDGAEEIK Unmodified 1171.5721 0.57208211 2531 Q15418 RPS6KA1 Ribosomal protein S6 kinase alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.903 31.092 2 7.5064E-27 33538 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 169.76 141.94 237070000 0 0 0 12076000 10888000 29078000 20416000 17872000 14583000 20547000 20580000 24716000 18147000 19453000 28715000 29375 2531 26843 246934;246935;246936;246937;246938;246939;246940;246941;246942;246943;246944;246945 196330;196331;196332;196333;196334;196335;196336;196337;196338;196339;196340;196341;196342;196343 196338 14 LGSGPDGAEEIKR Unmodified 1327.6732 0.67319314 2531 Q15418 RPS6KA1 Ribosomal protein S6 kinase alpha-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 25.98 26.073 3 0.03292 27697 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 25.731 6.1267 36484000 0 0 0 6652000 4246600 4571600 3398300 3532800 0 0 4616000 0 4970000 4496300 0 29376 2531 26844 246946;246947;246948;246949;246950;246951;246952;246953 196344;196345;196346 196345 3 LGSIAEIDLGVPPPVMK Oxidation (M) 1750.9539 0.95390802 4230 Q9BXP5 SRRT Serrate RNA effector molecule homolog yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 85.219 85.373 2 4.5207E-10 98739 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.338 71.96 37237000 0 0 0 0 0 0 0 0 4362600 10181000 5858100 0 0 5425700 11410000 29377 4230 26845 246954;246955;246956;246957;246958 196347;196348;196349;196350;196351;196352 196348 5705 6 LGSIAIQGAIEK Unmodified 1198.6921 0.69213767 1177 P24752 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 1 4 1 70.967 65.353 2 3.5584E-10 85724 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 125.74 48.914 299710000 63800000 224530000 11376000 0 0 0 0 0 0 0 0 0 0 0 0 29378 1177 26846 246959;246960;246961;246962;246963;246964 196353;196354;196355;196356;196357;196358;196359;196360;196361 196359 9 LGSLALHNSESLDQEHAK Unmodified 1947.965 0.96501806 3048 Q7L3B6 CDC37L1 Hsp90 co-chaperone Cdc37-like 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 4 2 2 52.432 46.42 3;4 4.2571E-14 64209 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.98 96.059 135430000 127520000 0 7911500 0 0 0 0 0 0 0 0 0 0 0 0 29379 3048 26847 246965;246966;246967;246968 196362;196363;196364;196365;196366 196363 5 LGSLNNEPALPSTSYLPSTPSVVPASSYIPSSETPPAPSSR Unmodified 4154.0695 0.069549298 4381 Q9H3P2 NELFA Negative elongation factor A yes yes 0 0 0 By MS/MS 10 0 1 1 90.583 90.698 3 0.0002165 105247 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 22.152 20.813 4526400 0 0 0 0 0 0 0 0 0 4526400 0 0 0 0 0 29380 4381 26848 246969 196367 196367 1 LGSLSER Unmodified 760.40792 0.40791731 421 O60664 PLIN3 Perilipin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.764 18.959 2 0.019157 19606 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 110.63 29.252 2815900000 0 0 0 161460000 177200000 182560000 223610000 241230000 187650000 272850000 241300000 329250000 284210000 201950000 312650000 29381 421 26849 246970;246971;246972;246973;246974;246975;246976;246977;246978;246979;246980;246981 196368;196369;196370;196371;196372;196373;196374;196375;196376;196377 196377 7 LGSLTPEIVSTPSSPEEEDK Unmodified 2114.0267 0.026674846 2464 Q14CS0 UBXN2B UBX domain-containing protein 2B yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 76.819 72.653 2 2.5958E-17 90652 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.13 89.95 39381000 0 39381000 0 0 0 0 0 0 0 0 0 0 0 0 0 29382 2464 26850 246982;246983 196378;196379 196378 2 LGSLVDEFK Unmodified 1006.5335 0.53351176 973 P12956 XRCC6 X-ray repair cross-complementing protein 6 yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 69.435 69.534 2 0.0032698 79048 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.162 26.128 39893000 0 0 0 399380 0 3412300 0 2412800 4186400 0 0 14788000 0 5975800 8719000 29383 973 26851 246984;246985;246986;246987;246988;246989;246990 196380;196381;196382 196380 3 LGSLVENNER Unmodified 1129.5728 0.57275081 4033 Q99613;B5ME19 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.195 31.384 2 0.00058764 34599 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 130.75 95.94 259960000 0 0 0 14232000 13920000 16819000 15059000 14051000 11103000 20083000 30783000 34205000 26247000 24509000 38945000 29384 4033 26852 246991;246992;246993;246994;246995;246996;246997;246998;246999;247000;247001;247002 196383;196384;196385;196386;196387;196388;196389;196390;196391;196392;196393;196394 196394 11 LGSLVENNERVFDHK Unmodified 1755.8904 0.89039656 4033 Q99613;B5ME19 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 0 0 1 By MS/MS 2 0 1 1 63.2 54.932 3 0.044591 74028 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 30.961 11.384 27549000 27549000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29385 4033 26853 247003 196395 196395 1 LGSPDYGNSALLSLPGYRPTTR Unmodified 2334.1968 0.19680891 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 80.78 80.93 3 7.0099E-09 93537 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 56.529 42.657 25901000 0 0 0 0 0 4130600 0 3783400 3590400 0 0 0 0 0 14396000 29386 2459 26854 247004;247005;247006;247007 196396;196397;196398;196399 196396 2 LGSPPPHK Unmodified 831.46029 0.46028724 4890 Q9UH65 SWAP70 Switch-associated protein 70 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 8.7741 5.6885 2 0.013456 9785 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.602 41.576 282400000 164350000 72648000 45407000 0 0 0 0 0 0 0 0 0 0 0 0 29387 4890 26855 247008;247009;247010 196400;196401;196402 196400 3 LGSPSPASR Unmodified 870.45593 0.45593014 5200 Q9Y4F5 CEP170B Centrosomal protein of 170 kDa protein B yes yes 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 14.156 14.318 2 0.031803 12829 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 47.603 30.363 23107000 0 0 0 1322100 1827100 1507400 1538800 1422300 0 2507200 2625200 2107100 3160300 2515300 2574400 29388 5200 26856 247011;247012;247013;247014;247015;247016;247017;247018;247019;247020;247021 196403 196403 1 LGSQAGEAAK Unmodified 930.47706 0.47705951 2409 Q14469 HES1 Transcription factor HES-1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 7.2829 7.4468 2 0.032639 5553 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 42.348 3.5568 13230000 0 0 0 0 0 0 0 0 0 0 0 5048400 8182000 0 0 29389 2409 26857 247022;247023 196404 196404 1 LGSQIFIK Unmodified 904.5382 0.53820321 616 O95049 TJP3 Tight junction protein ZO-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 59.179 58.557 2 0.0051142 66603 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 108.09 22.198 159290000 27097000 0 0 13013000 13833000 14048000 11727000 9710700 10728000 12191000 12060000 0 15637000 9235900 10013000 29390 616 26858 247024;247025;247026;247027;247028;247029;247030;247031;247032;247033;247034;247035 196405;196406;196407;196408;196409;196410;196411;196412 196405 7 LGSQIFVK Unmodified 890.52255 0.52255314 4867 Q9UDY2 TJP2 Tight junction protein ZO-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 51.379 51.209 2 0.01475 57866 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 69.984 39.348 48810000 0 0 0 11684000 8904300 0 9204100 0 0 0 19018000 0 0 0 0 29391 4867 26859 247036;247037;247038;247039 196413;196414;196415;196416;196417 196413 5 LGSQVSLVSGSSSSSK Unmodified 1508.7682 0.76821574 3253 Q8IX03 WWC1 Protein KIBRA yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 48.002 41.307 2 2.1635E-23 54390 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.48 96.864 25091000 3348300 21743000 0 0 0 0 0 0 0 0 0 0 0 0 0 29392 3253 26860 247040;247041 196418;196419 196418 2 LGSRVITDPSLSK Unmodified 1371.7722 0.7721789 4584 Q9NR09 BIRC6 Baculoviral IAP repeat-containing protein 6 yes yes 0 0 1 By MS/MS 2 0 1 1 53.804 45.741 3 0.013857 62728 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.797 16.592 51807000 51807000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29393 4584 26861 247042 196420 196420 1 LGSSCSGSGDSGRR Unmodified 1381.6004 0.6004389 95 CON__Q5D862;Q5D862 FLG2 Filaggrin-2 yes no 0 0 1 By MS/MS 10 0 1 1 5.6648 5.5414 3 0.00083229 3330 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 61.212 49.999 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29394 95 26862 247043 196421 196421 1 LGSSERDAEDVK Unmodified 1304.6208 0.62082322 2603 Q16512 PKN1 Serine/threonine-protein kinase N1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 13.539 13.764 3 0.019167 12216 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 37.426 20.4 131380000 0 0 0 0 0 11267000 10033000 7692300 9481300 17176000 13396000 15458000 18095000 13627000 15155000 29395 2603 26863 247044;247045;247046;247047;247048;247049;247050;247051;247052;247053 196422;196423 196423 2 LGSSFTK Unmodified 738.3912 0.39120462 2638 Q16851 UGP2 UTP--glucose-1-phosphate uridylyltransferase yes yes 0 0 0 By matching By MS/MS By MS/MS 2 0 3 1 1 1 23.118 19.183 1 0.043997 25233 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.04 130.04 147910000 106030000 37585000 4292600 0 0 0 0 0 0 0 0 0 0 0 0 29396 2638 26864 247054;247055;247056 196424 196424 0 LGSSGLGSASSIQAAVR Unmodified 1559.8267 0.82673367 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.798 63.889 2 1.166E-143 72482 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 206.69 189.67 440880000 0 0 0 18058000 17609000 43335000 26254000 27156000 22803000 49707000 48556000 53104000 28611000 41329000 64359000 29397 3119 26865 247057;247058;247059;247060;247061;247062;247063;247064;247065;247066;247067;247068 196425;196426;196427;196428;196429;196430;196431;196432;196433;196434;196435;196436;196437 196428 12 LGSSLDWDR Unmodified 1047.4985 0.49852324 1210 P26640 VARS Valine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 52.657 53.334 2 0.012192 59513 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.679 49.152 16280000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16280000 29398 1210 26866 247069;247070 196438;196439 196439 2 LGSSSLTNIPEEVR Unmodified 1500.7784 0.77838649 2932 Q6P3W7 SCYL2 SCY1-like protein 2 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 69.417 69.472 2 0.018434 78935 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 44.616 31.496 32401000 0 0 0 1398300 1593800 3132600 2215100 2490900 1230500 2964900 0 4527200 2261800 3200000 7386200 29399 2932 26867 247071;247072;247073;247074;247075;247076;247077;247078;247079;247080;247081 196440;196441;196442 196442 3 LGSTAIGIQTSEGVCLAVEK Unmodified 2032.0511 0.051055878 1228 P28066 PSMA5 Proteasome subunit alpha type-5 yes yes 0 0 0 By MS/MS By MS/MS 3 0 3 1 2 82.863 79.457 2;3 0.00094885 95870 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 70.26 54.887 20960000 7456100 13504000 0 0 0 0 0 0 0 0 0 0 0 0 0 29400 1228 26868 247082;247083;247084 196443;196444;196445 196444 2 LGSTAPQVLSTSSPAQQAENEAK Unmodified 2313.1448 0.14483292 5046 Q9UNZ2 NSFL1C NSFL1 cofactor p47 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.12 3.72 4 2 10 1 4 1 1 1 1 1 1 1 1 1 1 1 63.185 61.166 2;3 1.5026E-107 76684 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 204.43 179.1 686530000 14885000 541830000 3290000 5201700 2729300 0 5807200 5941000 0 10528000 18730000 19187000 6336700 15759000 36301000 29401 5046 26869 247085;247086;247087;247088;247089;247090;247091;247092;247093;247094;247095;247096;247097;247098;247099;247100 196446;196447;196448;196449;196450;196451;196452;196453;196454;196455;196456;196457;196458;196459;196460 196450 15 LGSTEVASNVPK Unmodified 1200.635 0.63501672 5227 Q9Y5A9 YTHDF2 YTH domain-containing family protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.06 2.49 1 1 14 2 1 2 1 1 2 1 1 1 1 1 1 1 38.402 37.903 2 2.7422E-05 41658 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 96.034 66.194 1236400000 0 334460000 0 37434000 38687000 48031000 70783000 85198000 56527000 95519000 102590000 78942000 78369000 79545000 130360000 29402 5227 26870 247101;247102;247103;247104;247105;247106;247107;247108;247109;247110;247111;247112;247113;247114;247115;247116 196461;196462;196463;196464;196465;196466;196467;196468;196469;196470 196470 9 LGSTVFVANLDYK Unmodified 1425.7504 0.75038083 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.035 79.09 2 1.9509E-25 91521 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 161.62 125.68 528410000 0 0 0 8039600 30365000 38731000 30077000 42674000 37335000 0 55301000 77861000 40991000 51257000 115780000 29403 1681 26871 247117;247118;247119;247120;247121;247122;247123;247124;247125;247126;247127;247128 196471;196472;196473;196474;196475;196476;196477;196478;196479;196480;196481;196482;196483;196484;196485;196486;196487 196483 17 LGSTVVDLSVPGK Unmodified 1270.7133 0.71326704 3144 Q86U90 YRDC YrdC domain-containing protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.727 70.799 2 0.0033475 80697 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.198 42.978 70773000 0 0 0 4558800 3803300 7037800 4779400 3368200 3451400 9913300 5979300 8558300 5315900 5059600 8947800 29404 3144 26872 247129;247130;247131;247132;247133;247134;247135;247136;247137;247138;247139;247140 196488;196489;196490;196491;196492;196493;196494;196495;196496;196497 196491 7 LGSVDSFER Unmodified 1008.4876 0.4876242 398 O60343 TBC1D4 TBC1 domain family member 4 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 42.137 42.329 2 0.031803 47517 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 47.603 12.308 72683000 0 0 0 0 4482500 9879900 7471600 6519600 6251700 0 10601000 0 9585600 6853600 11038000 29405 398 26873 247141;247142;247143;247144;247145;247146;247147;247148;247149 196498;196499;196500;196501 196498 4 LGSVEAPK Unmodified 799.44397 0.44396847 1497 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes yes 0 0 0 By MS/MS 10 0 1 1 22.122 22.469 2 0.027935 23531 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 57.047 7.4575 4702200 0 0 0 0 0 0 0 0 0 0 0 0 4702200 0 0 29406 1497 26874 247150 196502 196502 1 LGSVLSPESPKPTPLTPLEPQK Unmodified 2314.2784 0.27841328 3897 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77.833 77.124 3 1.137E-16 88671 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.723 69.286 296720000 9993800 0 3076700 10500000 13086000 23463000 18133000 15954000 22387000 27156000 28776000 31518000 21134000 28737000 42804000 29407 3897 26875 247151;247152;247153;247154;247155;247156;247157;247158;247159;247160;247161;247162;247163;247164 196503;196504;196505;196506;196507;196508;196509;196510;196511;196512;196513;196514;196515;196516;196517;196518;196519;196520 196507 18 LGSVPVTVK Unmodified 898.54877 0.54876789 5194 Q9Y4C2 TCAF1 TRPM8 channel-associated factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 2 1 1 1 45.357 45.43 2 0.01612 51387 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 56.81 31.867 135180000 0 0 0 0 6990500 29574000 32638000 34469000 16236000 6483400 0 0 8789800 0 0 29408 5194 26876 247165;247166;247167;247168;247169;247170;247171;247172 196521;196522;196523;196524;196525 196522 5 LGSVSLDLCDGDTGEPR Unmodified 1789.8152 0.81524228 3361 Q8N6R0 METTL13 Methyltransferase-like protein 13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 71.493 71.712 2 1.2571E-28 81843 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 116.01 106.82 26135000 0 0 0 0 0 6064300 0 0 3988500 0 0 9009800 0 0 7072300 29409 3361 26877 247173;247174;247175;247176;247177 196526;196527;196528;196529;196530 196527 5 LGSVSLIPLR Unmodified 1053.6546 0.65462995 3944 Q96P48 ARAP1 Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 80.575 80.657 2 0.0016798 93353 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 103.56 79.408 23916000 0 0 0 1455900 0 2801400 1282800 1391200 0 2348900 2808400 3316000 1888500 1854100 4768500 29410 3944 26878 247178;247179;247180;247181;247182;247183;247184;247185;247186;247187;247188 196531;196532;196533;196534;196535;196536;196537;196538 196531 8 LGSWLAIR Unmodified 914.53379 0.53378653 2136 Q07157 TJP1 Tight junction protein ZO-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 76.744 76.768 2 0.020537 88667 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 62.717 42.162 24386000 0 0 0 1457500 1282100 3844300 2803800 2547500 2590500 3105100 3530200 3225300 0 0 0 29411 2136 26879 247189;247190;247191;247192;247193;247194;247195;247196;247197;247198 196539;196540;196541;196542 196539 4 LGSYSGPTSVSR Unmodified 1209.599 0.59896556 4257 Q9BZ23 PANK2 Pantothenate kinase 2, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 35.819 35.897 2 2.4072E-06 39871 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 110.39 91.293 324110000 0 0 0 36709000 63963000 55668000 0 0 0 31740000 51710000 84322000 0 0 0 29412 4257 26880 247199;247200;247201;247202;247203;247204 196543;196544;196545;196546;196547;196548 196548 4 LGTDEISPR Unmodified 986.50327 0.50327426 121 O00159 MYO1C Unconventional myosin-Ic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.782 33.965 2 0.003518 37204 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 103.42 58.698 253820000 0 0 0 15171000 17193000 19299000 23332000 18530000 12987000 21077000 36371000 31372000 21490000 16757000 20247000 29413 121 26881 247205;247206;247207;247208;247209;247210;247211;247212;247213;247214;247215;247216 196549;196550;196551;196552;196553;196554;196555;196556;196557;196558;196559;196560;196561 196552 11 LGTDESCFNMILATR Oxidation (M) 1742.7968 0.79675545 1100 P20073 ANXA7 Annexin A7 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 78.327 78.417 2 4.0067E-05 89782 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 75.479 61.816 118310000 0 0 0 3480700 0 15506000 5071600 6227000 5024700 19906000 12851000 12422000 6478200 9705400 21640000 29414 1100 26882 247217;247218;247219;247220;247221;247222;247223;247224;247225;247226;247227 196562;196563;196564;196565;196566;196567;196568;196569;196570;196571;196572 196569 1579 11 LGTDESCFNMILATR Unmodified 1726.8018 0.80184082 1100 P20073 ANXA7 Annexin A7 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 83.515 83.661 2 0.0010706 96453 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.46 59.781 13123000 0 0 0 0 0 0 0 0 0 3925200 0 0 0 0 9197600 29415 1100 26882 247228;247229 196573 196573 1 LGTDLEYLK Unmodified 1050.5597 0.55972651 271 O15294 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 65.721 64.384 2 0.001465 73669 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 141.93 87.725 624770000 7555400 279490000 9454000 14734000 18747000 21914000 22790000 22868000 18840000 33729000 30879000 33007000 32318000 30061000 48387000 29416 271 26883 247230;247231;247232;247233;247234;247235;247236;247237;247238;247239;247240;247241;247242;247243;247244;247245 196574;196575;196576;196577;196578;196579;196580;196581;196582;196583;196584;196585;196586;196587;196588;196589 196581 15 LGTGFNPNTLDK Unmodified 1275.6459 0.64591575 3933 Q96N67 DOCK7 Dedicator of cytokinesis protein 7 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 59.808 58.201 2 3.1081E-14 74827 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 135.86 100.5 332790000 6982100 167300000 1417100 15097000 14857000 14848000 17707000 13121000 11049000 16842000 18713000 0 17365000 17496000 0 29417 3933 26884 247246;247247;247248;247249;247250;247251;247252;247253;247254;247255;247256;247257;247258;247259 196590;196591;196592;196593;196594;196595;196596 196591 7 LGTGFSDEELEEHHQSLK Unmodified 2054.9545 0.95451296 1081 P18858 LIG1 DNA ligase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 6.07 3.94 6 1 7 3 2 2 1 1 1 1 1 1 1 56.482 53.38 3;4 7.0776E-06 72971 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.367 81.049 371050000 119900000 85206000 71609000 7275200 5211800 19223000 10199000 0 9552600 13320000 29546000 0 0 0 0 29418 1081 26885 247260;247261;247262;247263;247264;247265;247266;247267;247268;247269;247270;247271;247272;247273 196597;196598;196599;196600;196601;196602;196603;196604 196601 4 LGTITPDGADVYSFQEEEPVLDPHLAK Unmodified 2940.4393 0.43928361 3699 Q92995 USP13 Ubiquitin carboxyl-terminal hydrolase 13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.25 3.34 2 1 1 2 1 1 88.763 86.167 3 2.2568E-08 107156 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.315 61.194 69540000 0 56587000 7474800 0 0 0 0 0 0 0 0 0 0 0 5477600 29419 3699 26886 247274;247275;247276;247277 196605;196606;196607;196608;196609;196610 196606 6 LGTITPDGADVYSYDEDDMVLDPSLAEHLSHFGIDMLK Oxidation (M) 4194.929 0.928958 1488 P45974 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes yes 0 1 0 By MS/MS 2 0 1 1 98.267 90.136 4 6.8453E-74 116333 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 103.55 102.13 34621000 34621000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29420 1488 26887 247278 196611 196611 2335 1 LGTLSALDILIK Unmodified 1255.7751 0.77513901 3170 Q86VP6 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.55 3.8 3 2 6 2 2 1 1 1 1 1 1 1 95.875 93.927 2 4.7463E-25 116401 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 178.84 110.22 396340000 276960000 90803000 11674000 0 0 2347600 917260 0 0 3301100 2072500 0 0 1436600 6821700 29421 3170 26888 247279;247280;247281;247282;247283;247284;247285;247286;247287;247288;247289 196612;196613;196614;196615;196616;196617;196618;196619;196620 196614 9 LGTLSLPLPPAQTSDR Unmodified 1664.9097 0.90973501 4303 Q9GZS1 POLR1E DNA-directed RNA polymerase I subunit RPA49 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 83.276 83.43 2 0.0011539 96301 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.528 40.572 28488000 0 0 0 0 0 0 0 2954500 0 0 6370400 0 4840700 5271600 9050600 29422 4303 26889 247290;247291;247292;247293;247294 196621;196622;196623 196621 3 LGTLSPAFSTR Unmodified 1148.619 0.61897272 3039 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.882 60.985 2 2.0671E-05 70654 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 123.86 66.686 628830000 0 0 0 24919000 19029000 64430000 34490000 44048000 20721000 66595000 74496000 66632000 41836000 49356000 122280000 29423 3039 26890 247295;247296;247297;247298;247299;247300;247301;247302;247303;247304;247305;247306 196624;196625;196626;196627;196628;196629;196630;196631;196632;196633;196634;196635 196634 12 LGTMDMSITR Unmodified 1123.5366 0.536565 4345 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 58.5 58.7 2 0.018066 65974 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.602 25.559 12283000 0 0 0 0 1369600 0 0 2808500 0 0 0 2412100 0 0 5692600 29424 4345 26891 247307;247308;247309;247310 196636 196636 1 LGTPELSTAERK Unmodified 1300.6987 0.69867961 2231 Q13085 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.355 35.537 3 0.001698 39096 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 54.823 46.413 220450000 0 0 0 9019200 13317000 17686000 14655000 14727000 13925000 20055000 19577000 31309000 15647000 19863000 30668000 29425 2231 26892 247311;247312;247313;247314;247315;247316;247317;247318;247319;247320;247321;247322 196637;196638;196639;196640;196641;196642;196643;196644;196645;196646 196639 10 LGTPFSQDSSYSSR Unmodified 1530.6951 0.69505079 5057 Q9UPS6 SETD1B Histone-lysine N-methyltransferase SETD1B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 52.074 52.316 2 1.6527E-16 58966 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 133.07 115.21 72566000 0 0 0 0 4191200 0 4963400 8912800 0 8236300 8779700 11924000 11149000 5902000 8508000 29426 5057 26893 247323;247324;247325;247326;247327;247328;247329;247330;247331 196647;196648;196649;196650;196651;196652;196653;196654;196655 196650 7 LGTPQQIAIAR Unmodified 1166.6772 0.6771563 3050 Q7L576;Q96F07 CYFIP1;CYFIP2 Cytoplasmic FMR1-interacting protein 1;Cytoplasmic FMR1-interacting protein 2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 54.996 55.127 2 0.0043941 62045 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 61.582 40.843 147380000 0 0 0 8150800 7957000 9945500 11055000 8606300 7003300 14418000 15268000 16699000 12708000 14110000 21462000 29427 3050 26894 247332;247333;247334;247335;247336;247337;247338;247339;247340;247341;247342;247343 196656 196656 1 LGTQQLIPK Unmodified 996.59678 0.59678072 2819 Q5VV41 ARHGEF16 Rho guanine nucleotide exchange factor 16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53.477 52.399 2 0.00048382 70995 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 127.46 85.96 241080000 51648000 94019000 2198800 4949500 5226000 7189100 5475200 4861100 4221100 8764500 9630100 10262000 6114500 7452200 19067000 29428 2819 26895 247344;247345;247346;247347;247348;247349;247350;247351;247352;247353;247354;247355;247356;247357;247358 196657;196658;196659;196660;196661;196662;196663;196664;196665;196666;196667;196668;196669;196670 196664 14 LGTQSTGPGR Unmodified 972.49886 0.49885759 2568 Q15735 INPP5J Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 1 2 3 3 3 2 1 3 3 3 10.34 10.469 2 0.0014472 8751 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.064 51.401 65209000 0 0 0 1446200 3615500 6467000 8745900 0 5429800 5099900 2929000 0 7452400 8051800 15972000 29429 2568 26896 247359;247360;247361;247362;247363;247364;247365;247366;247367;247368;247369;247370;247371;247372;247373;247374;247375;247376;247377;247378;247379;247380;247381;247382 196671;196672;196673;196674;196675;196676;196677;196678 196674 7 LGTQTFCSR Unmodified 1068.5022 0.50222841 4128 Q9BSJ8 ESYT1 Extended synaptotagmin-1 yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 31.521 31.72 2 0.0036563 34209 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 89.355 59.17 166850000 0 0 0 12524000 19258000 13670000 0 10361000 9140900 15595000 14859000 20203000 13459000 16503000 21282000 29430 4128 26897 247383;247384;247385;247386;247387;247388;247389;247390;247391;247392;247393 196679;196680;196681;196682;196683;196684;196685;196686 196683 6 LGTSAEGAHLR Unmodified 1110.5782 0.57817054 2484 Q15042 RAB3GAP1 Rab3 GTPase-activating protein catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 21.191 21.447 2 0.00042561 21147 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 85.731 51.934 43293000 0 0 0 0 2276000 5587600 5704900 0 0 4597500 5482800 3862600 4414100 4793600 6574300 29431 2484 26898 247394;247395;247396;247397;247398;247399;247400;247401;247402;247403 196687;196688;196689;196690;196691;196692;196693;196694;196695;196696 196693 10 LGTSELLLAK Unmodified 1043.6227 0.62266112 4994 Q9ULH1 ASAP1 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 74.447 69.292 2 0.025849 86979 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.892 22.731 29417000 0 29417000 0 0 0 0 0 0 0 0 0 0 0 0 0 29432 4994 26899 247404 196697 196697 1 LGTSESLPCTAEELSR Unmodified 1748.8251 0.82507869 4273 Q9BZL6 PRKD2 Serine/threonine-protein kinase D2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.684 66.769 2 1.0268E-23 75815 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 122.46 108.69 169180000 0 0 0 8346100 8551900 13630000 12086000 12831000 9864900 16582000 19960000 19188000 18577000 14706000 14858000 29433 4273 26900 247405;247406;247407;247408;247409;247410;247411;247412;247413;247414;247415;247416 196698;196699;196700;196701;196702;196703;196704;196705;196706;196707;196708;196709 196702 12 LGTSGLNQPTFQQSK Unmodified 1604.8158 0.81583463 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 51.628 50.381 2 3.8729E-148 63834 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 237.53 222.85 520640000 29427000 147740000 0 23900000 22520000 27741000 28967000 28115000 28888000 37310000 0 50566000 42713000 28173000 24585000 29434 19 26901 247417;247418;247419;247420;247421;247422;247423;247424;247425;247426;247427;247428;247429;247430 196710;196711;196712;196713;196714;196715;196716;196717;196718;196719;196720;196721;196722;196723;196724;196725 196713 16 LGTVATYRGPSEGFTSDK Unmodified 1884.9218 0.92175626 4375 Q9H2Y7 ZNF106 Zinc finger protein 106 yes yes 0 0 1 By MS/MS 2 0 1 1 61.587 53.332 3 7.4539E-05 72151 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.96 40.477 8853300 8853300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29435 4375 26902 247431 196726 196726 1 LGTVITPDTWK Unmodified 1229.6656 0.66558856 4788 Q9P021 CRIPT Cysteine-rich PDZ-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 6.71 3.81 2 1 4 1 2 1 1 1 1 73.34 71.155 2 3.4039E-09 89674 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.45 102.15 211890000 9358900 186270000 0 0 0 0 0 0 0 0 3186300 5142600 0 2221200 5715600 29436 4788 26903 247432;247433;247434;247435;247436;247437;247438 196727;196728;196729;196730 196727 4 LGTVYCQASFPGANIIGNK Unmodified 2009.004 0.0040461055 775 P04150 NR3C1 Glucocorticoid receptor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.788 81.849 2 5.2702E-53 94375 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 146.36 127.73 132280000 0 0 0 1991900 6318700 8623200 5816200 10832000 10936000 12709000 11807000 24573000 7706300 10749000 20214000 29437 775 26904 247439;247440;247441;247442;247443;247444;247445;247446;247447;247448;247449;247450 196731;196732;196733;196734;196735;196736;196737;196738;196739;196740;196741;196742 196734 12 LGVAQQLVEK Unmodified 1083.6288 0.62880913 2857 Q68DC2 ANKS6 Ankyrin repeat and SAM domain-containing protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 2 1 1 51.145 51.308 2 1.1782E-05 57996 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 146.23 107.81 65194000 0 0 0 0 7452300 0 11797000 11168000 0 8100600 12826000 0 0 0 13851000 29438 2857 26905 247451;247452;247453;247454;247455;247456;247457;247458;247459 196743;196744;196745;196746;196747;196748;196749 196747 7 LGVCFDVPTASVTEIQEK Unmodified 1991.9874 0.98739299 4588 Q9NR30 DDX21 Nucleolar RNA helicase 2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 88.315 84.271 2 4.8857E-05 104784 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.536 64.802 36861000 0 36861000 0 0 0 0 0 0 0 0 0 0 0 0 0 29439 4588 26906 247460;247461 196750 196750 1 LGVDTIAK Unmodified 815.47527 0.4752686 4276 Q9BZV1 UBXN6 UBX domain-containing protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 41.189 41.429 2 0.012173 44806 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 75.243 36.425 163760000 0 0 0 11998000 0 14505000 14516000 12560000 9037300 16466000 16674000 16442000 13726000 12365000 25472000 29440 4276 26907 247462;247463;247464;247465;247466;247467;247468;247469;247470;247471;247472 196751;196752;196753;196754;196755;196756;196757 196755 6 LGVEFDETTADDRK Unmodified 1594.7475 0.74748029 809 P05413 FABP3 Fatty acid-binding protein, heart yes yes 0 0 1 By MS/MS 2 0 1 1 57.055 48.875 3 0.00096606 66739 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.472 51.442 17625000 17625000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29441 809 26908 247473 196758 196758 1 LGVENCYFPMFVSQSALEK Unmodified 2218.0439 0.04386201 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 By MS/MS 2 0 1 1 97.204 92.43 2 2.221E-05 114440 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.27 74.713 14966000 0 14966000 0 0 0 0 0 0 0 0 0 0 0 0 0 29442 848 26909 247474 196759 196759 1 LGVIEDHSNR Unmodified 1138.5731 0.57308516 1002 P14625;Q58FF3 HSP90B1;HSP90B2P Endoplasmin;Putative endoplasmin-like protein yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 25 2 3 2 2 2 2 2 2 2 2 2 2 22.982 23.166 2;3 0.0010019 24083 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 87.258 82.16 3464100000 0 0 0 131310000 118140000 300940000 163920000 136980000 109140000 382480000 355870000 524490000 347140000 367300000 526420000 29443 1002 26910 247475;247476;247477;247478;247479;247480;247481;247482;247483;247484;247485;247486;247487;247488;247489;247490;247491;247492;247493;247494;247495;247496;247497;247498;247499 196760;196761;196762;196763;196764;196765;196766;196767;196768;196769;196770;196771;196772;196773;196774 196762 6 LGVIEDHSNRTR Unmodified 1395.7219 0.72187466 1002 P14625 HSP90B1 Endoplasmin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.478 19.676 3 0.00029832 19101 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 79.82 60.991 486120000 0 0 0 22425000 11284000 39081000 31152000 27118000 26824000 42329000 52896000 54289000 37395000 29045000 112280000 29444 1002 26911 247500;247501;247502;247503;247504;247505;247506;247507;247508;247509;247510;247511 196775;196776;196777;196778;196779;196780;196781;196782;196783;196784;196785;196786;196787;196788;196789 196783 14 LGVLHPDVITK Unmodified 1190.7023 0.70230842 4625 Q9NSD9 FARSB Phenylalanine--tRNA ligase beta subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.74 3.84 6 2 11 3 3 2 1 1 1 1 1 1 1 1 1 1 1 60.659 58.358 2;3 4.6095E-09 80794 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 145.89 109.13 1639500000 1124600000 275810000 39946000 0 6785100 18420000 9450300 11404000 8153500 12355000 21509000 18822000 16901000 22263000 53121000 29445 4625 26912 247512;247513;247514;247515;247516;247517;247518;247519;247520;247521;247522;247523;247524;247525;247526;247527;247528;247529;247530 196790;196791;196792;196793;196794;196795;196796;196797;196798;196799;196800;196801;196802;196803;196804 196795 13 LGVLQPEVYK Unmodified 1144.6492 0.64921022 1396 P38398 BRCA1 Breast cancer type 1 susceptibility protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 64.602 64.746 2 0.012091 74053 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 53.089 31.552 38509000 0 0 0 2521900 0 2599200 2688400 2504800 2638100 3448600 3518200 5392900 3520200 3015100 6661900 29446 1396 26913 247531;247532;247533;247534;247535;247536;247537;247538;247539;247540;247541 196805;196806;196807;196808;196809;196810;196811;196812 196807 8 LGVLSSSQNGPPK Unmodified 1282.6881 0.68811492 3419 Q8NDX5 PHC3 Polyhomeotic-like protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.08 3.33 2 1 9 1 1 1 1 1 1 1 1 1 1 1 1 43.997 42.544 2 7.4054E-05 47784 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 86.898 74.851 84707000 29606000 2442200 1798500 4864000 4752900 8373900 0 5158500 7925800 4991200 0 8561900 6232500 0 0 29447 3419 26914 247542;247543;247544;247545;247546;247547;247548;247549;247550;247551;247552;247553 196813;196814;196815;196816;196817;196818;196819 196816 7 LGVMPPEQPLPVK Unmodified 1403.7847 0.78465784 5102 Q9Y2H2 INPP5F Phosphatidylinositide phosphatase SAC2 yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 76.233 76.327 2 0.010093 88135 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 43.512 32.157 34379000 0 0 0 0 2377300 2257700 0 0 2875000 4507000 5209000 4548400 2938000 4081000 5586100 29448 5102 26915 247554;247555;247556;247557;247558;247559;247560;247561;247562 196820;196821 196820 2 LGVMPPEQPLPVK Oxidation (M) 1419.7796 0.77957246 5102 Q9Y2H2 INPP5F Phosphatidylinositide phosphatase SAC2 yes yes 0 1 0 By matching By MS/MS 10 0 2 1 1 69.671 69.844 2 0.0093084 80153 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 40.994 31.041 10181000 0 0 0 0 0 2863100 0 0 0 0 0 7317800 0 0 0 29449 5102 26915 247563;247564 196822 196822 6500 1 LGVNNISGIEEVNMFTNQGTVIHFNNPK Oxidation (M) 3101.524 0.52403307 1102 P20290 BTF3 Transcription factor BTF3 yes yes 0 1 0 By MS/MS 2 0 2 2 92.495 84.364 3 3.5369E-47 109531 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.31 105.02 28673000 28673000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29450 1102 26916 247565;247566 196823;196824;196825;196826 196826 1585 4 LGVQDLFNSSK Unmodified 1206.6245 0.62445203 1289 P30740 SERPINB1 Leukocyte elastase inhibitor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 78.798 77.768 2 8.6251E-28 89381 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 173.37 133.1 516910000 44230000 132770000 0 18066000 10538000 15987000 13163000 10766000 9989500 18442000 42398000 43032000 15606000 31992000 109920000 29451 1289 26917 247567;247568;247569;247570;247571;247572;247573;247574;247575;247576;247577;247578;247579;247580;247581 196827;196828;196829;196830;196831;196832;196833;196834;196835;196836;196837;196838;196839;196840;196841;196842 196838 15 LGVQVVITDPEK Unmodified 1296.7289 0.7289171 1067 P17987 TCP1 T-complex protein 1 subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.94 3.76 1 7 3 6 3 6 2 1 1 1 1 1 1 75.962 73.722 2 5.3365E-24 88939 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 169.93 151.15 2287700000 384140000 1844600000 24050000 0 0 4464600 0 0 0 6343000 6163500 4377300 0 3471700 10080000 29452 1067 26918 247582;247583;247584;247585;247586;247587;247588;247589;247590;247591;247592;247593;247594;247595;247596;247597;247598 196843;196844;196845;196846;196847;196848;196849;196850;196851;196852;196853;196854;196855;196856;196857;196858;196859;196860;196861;196862;196863;196864;196865 196846 21 LGVTANDVK Unmodified 915.50255 0.50254598 1422 P40925 MDH1 Malate dehydrogenase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.47 3.59 3 2 10 2 2 1 1 1 1 1 1 1 1 1 1 1 30.991 29.521 2 0.0031269 30924 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.064 47.25 10639000000 373770000 9534700000 97919000 20681000 7855500 11307000 14641000 0 6873300 13589000 95053000 87121000 0 79729000 295440000 29453 1422 26919 247599;247600;247601;247602;247603;247604;247605;247606;247607;247608;247609;247610;247611;247612;247613 196866;196867;196868;196869;196870;196871;196872;196873;196874;196875;196876;196877;196878;196879;196880;196881 196871 13 LGVTVLSR Unmodified 843.5178 0.51780212 548 O75828 CBR3 Carbonyl reductase [NADPH] 3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 51.172 51.519 2 0.0049705 57113 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 133.9 0 128000000 0 0 0 0 0 0 7472700 8952900 4209600 0 22269000 23987000 0 14525000 46584000 29454 548 26920 247614;247615;247616;247617;247618;247619;247620 196882;196883;196884;196885;196886;196887;196888;196889;196890 196884 9 LGVVFEK Unmodified 790.45889 0.45889025 276 O15357 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53.31 52.2 2 0.023384 59248 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 88.029 49.658 464470000 83108000 58189000 48098000 0 15911000 28556000 19450000 22695000 23970000 32529000 35539000 38878000 30611000 23736000 3195200 29455 276 26921 247621;247622;247623;247624;247625;247626;247627;247628;247629;247630;247631;247632;247633;247634 196891;196892;196893;196894;196895;196896;196897;196898;196899 196893 9 LGYAGNTEPQFIIPSCIAIK Unmodified 2191.1347 0.13472593 1835 P61158 ACTR3 Actin-related protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 92.898 91.404 3 0.0022512 105903 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.481 30.979 26399000 0 21546000 0 0 0 0 0 0 0 0 1450100 0 0 0 3403100 29456 1835 26922 247635;247636;247637 196900;196901 196901 2 LGYAVYETPTAHNGAK Unmodified 1690.8315 0.83148469 4324 Q9H0E2 TOLLIP Toll-interacting protein yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 46.623 46.697 3 0.00033206 53229 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 63.29 56.458 31044000 0 0 0 26209000 0 0 0 0 0 0 0 0 0 0 4835500 29457 4324 26923 247638;247639 196902 196902 1 LGYDPVELDPEDMCR Unmodified 1807.7757 0.77568565 2142 Q07864 POLE DNA polymerase epsilon catalytic subunit A yes yes 0 0 0 By MS/MS 2 0 1 1 84.179 79.459 2 0.00019279 98804 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.34 58.748 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29458 2142 26924 247640 196903 196903 1 LGYEEHIPGQTR Unmodified 1398.6892 0.68917755 465 O75153 CLUH Clustered mitochondria protein homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.086 41.264 3 0.0056253 46162 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 39.424 33.726 187990000 0 0 0 7648100 4964700 20265000 11922000 7494400 6370500 12301000 21977000 22031000 11483000 15994000 45543000 29459 465 26925 247641;247642;247643;247644;247645;247646;247647;247648;247649;247650;247651;247652 196904;196905;196906;196907 196904 4 LGYETTDALPESSTCSSTLFLPHYASAK Unmodified 3045.4277 0.42773264 2774 Q5T447 HECTD3 E3 ubiquitin-protein ligase HECTD3 yes yes 0 0 0 By MS/MS 3 0 1 1 86.199 82.977 3 0.019781 99400 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 19.535 14.481 3394800 0 3394800 0 0 0 0 0 0 0 0 0 0 0 0 0 29460 2774 26926 247653 196908 196908 1 LGYFSVDPDSHQGK Unmodified 1548.7209 0.72087161 1528 P47897 QARS Glutamine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.856 56.978 3 0.0003625 64730 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 66.708 56.23 358280000 0 0 0 17831000 20201000 32159000 22062000 25497000 20657000 32375000 31344000 40677000 24632000 27606000 63239000 29461 1528 26927 247654;247655;247656;247657;247658;247659;247660;247661;247662;247663;247664;247665 196909;196910;196911;196912;196913;196914;196915;196916;196917;196918;196919 196910 8 LGYPVLVR Unmodified 915.55419 0.55418762 1224 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.013 68.093 2 0.013136 78609 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 73.039 58.882 233010000 0 0 0 8636700 9845600 19272000 12891000 13122000 10897000 20365000 23106000 34379000 17853000 19147000 43492000 29462 1224 26928 247666;247667;247668;247669;247670;247671;247672;247673;247674;247675;247676;247677 196920;196921;196922;196923;196924;196925;196926 196926 6 LGYSSTEIHSVLQK Unmodified 1560.8148 0.814772 2722 Q5D1E8 ZC3H12A Ribonuclease ZC3H12A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 60.52 60.681 3 0.0010366 69082 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 56.569 47.534 62205000 0 0 0 0 2721300 0 5243300 5266000 4149200 0 9145000 0 8778400 8008600 18893000 29463 2722 26929 247678;247679;247680;247681;247682;247683;247684;247685 196927;196928;196929 196927 3 LGYWNQQMVPIK Unmodified 1475.7595 0.75950572 136 O00267 SUPT5H Transcription elongation factor SPT5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 80.494 80.609 2 0.00052172 92872 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 97.431 82.757 16295000 0 0 0 0 0 2370100 0 0 0 0 0 0 0 3311900 10613000 29464 136 26930 247686;247687;247688 196930 196930 1 LHAEAISLLK Unmodified 1093.6495 0.64954457 4360 Q9H270 VPS11 Vacuolar protein sorting-associated protein 11 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 74.252 66.122 2 0.014615 87293 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.375 27.8 26055000 26055000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29465 4360 26931 247689 196931 196931 1 LHALAGFQQR Unmodified 1139.62 0.61997578 3941 Q96P11;Q3KNT7 NSUN5;NSUN5P1 Probable 28S rRNA (cytosine-C(5))-methyltransferase;Putative NOL1/NOP2/Sun domain family member 5B no no 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 41.026 41.387 2;3 0.022774 45418 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 77.741 51.802 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29466 3941 26932 247690;247691;247692 196932;196933;196934 196934 3 LHAVNAEECNVLQGR Unmodified 1708.8315 0.83150147 511 O75521 ECI2 Enoyl-CoA delta isomerase 2, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 47.488 47.662 3 0.013001 52502 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.682 32.836 76729000 0 0 0 3797200 5669300 7728100 0 7540900 5634300 0 10707000 6685600 10004000 6353900 12608000 29467 511 26933 247693;247694;247695;247696;247697;247698;247699;247700;247701;247702 196935 196935 0 LHCESESFK Unmodified 1135.4968 0.49680868 1686 P52434 POLR2H DNA-directed RNA polymerases I, II, and III subunit RPABC3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 15.275 15.561 2 0.0025264 14276 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 138.54 131.72 53711000 0 0 0 0 0 1919600 0 1726300 0 3028600 9597800 9064400 0 8799800 19575000 29468 1686 26934 247703;247704;247705;247706;247707;247708;247709;247710 196936;196937;196938;196939;196940;196941;196942 196938 7 LHCSMLAEDAIK Unmodified 1386.6636 0.66355643 4352 Q9H1K1 ISCU Iron-sulfur cluster assembly enzyme ISCU, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 62.235 53.98 3 0.0057596 73057 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.776 46.243 8803100 8803100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29469 4352 26935 247711 196943 196943 1 LHCYQTLTGIK Unmodified 1332.686 0.68600643 5093 Q9Y296 TRAPPC4 Trafficking protein particle complex subunit 4 yes yes 0 0 0 By MS/MS 2 0 1 1 56.494 48.347 3 0.04451 66024 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 34.695 26.208 17184000 17184000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29470 5093 26936 247712 196944 196944 1 LHDAFFK Unmodified 876.44939 0.4493882 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 42.461 41.258 2 0.013291 60139 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 122.79 96.681 902080000 156600000 34173000 1785600 0 31662000 74012000 66681000 57873000 59336000 84837000 88468000 87329000 99376000 59954000 0 29471 2290 26937 247713;247714;247715;247716;247717;247718;247719;247720;247721;247722;247723;247724;247725 196945;196946;196947;196948;196949;196950;196951;196952;196953 196949 8 LHDALDAK Unmodified 881.46068 0.46068117 854 P07954 FH Fumarate hydratase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.57 3.85 3 1 3 1 2 1 1 1 1 16.7 14.494 2 0.0064334 18408 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 116.73 49.691 1052000000 87238000 530160000 417190000 0 0 0 0 0 0 0 14401000 0 0 0 3041400 29472 854 26938 247726;247727;247728;247729;247730;247731;247732 196954;196955;196956;196957;196958;196959;196960;196961 196957 7 LHDEDLLLVEGMSVPK Unmodified 1793.9233 0.92333617 5075 Q9Y223 GNE Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase;UDP-N-acetylglucosamine 2-epimerase (hydrolyzing);N-acetylmannosamine kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 89.794 83.897 3 0.00013958 106042 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.98 59.488 82024000 59788000 18193000 4043300 0 0 0 0 0 0 0 0 0 0 0 0 29473 5075 26939 247733;247734;247735;247736 196962;196963;196964 196962 3 LHDETLTYLNQGQSYEIR Unmodified 2179.0546 0.054561351 2192 Q12800;Q9NZI7 TFCP2;UBP1 Alpha-globin transcription factor CP2;Upstream-binding protein 1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 71.534 71.721 3 4.6724E-30 81825 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 115.73 107.74 66782000 0 0 0 0 0 7460800 0 0 4359100 6419300 5454100 7403300 3423200 3577000 28685000 29474 2192 26940 247737;247738;247739;247740;247741;247742;247743;247744 196965;196966;196967;196968;196969;196970 196966 6 LHDFQDEIVENSVTK Unmodified 1772.8581 0.85809337 2816 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.4 3.68 4 1 10 1 3 1 1 1 1 1 1 1 1 1 1 1 65.22 63.649 2;3 3.5097E-31 78675 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 104.95 94.296 332410000 14662000 124980000 82188000 0 6011800 14409000 6261500 0 7209700 9352500 9038200 13796000 9347200 11579000 23572000 29475 2816 26941 247745;247746;247747;247748;247749;247750;247751;247752;247753;247754;247755;247756;247757;247758;247759 196971;196972;196973;196974;196975;196976;196977;196978;196979;196980;196981;196982;196983;196984;196985;196986;196987 196982 15 LHDFVSK Unmodified 844.4443 0.44430282 4329 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 21.529 21.655 2 0.027918 21854 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 77.058 32.447 214540000 0 0 0 19658000 16002000 22605000 20181000 0 15478000 29399000 0 33883000 30237000 27098000 0 29476 4329 26942 247760;247761;247762;247763;247764;247765;247766;247767;247768 196988;196989;196990;196991;196992;196993;196994;196995 196993 8 LHDIETENQK Unmodified 1225.5939 0.59388018 1406;2357 P39880;Q13948 CUX1 Homeobox protein cut-like 1;Protein CASP no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 12.852 13.007 2;3 0.0026212 11459 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 97.635 62.279 219970000 0 0 0 14832000 12434000 14264000 15748000 16118000 11412000 22087000 19929000 25878000 22448000 17138000 27684000 29477 1406;2357 26943 247769;247770;247771;247772;247773;247774;247775;247776;247777;247778;247779;247780;247781;247782;247783;247784;247785;247786;247787;247788;247789;247790;247791;247792 196996;196997;196998;196999;197000;197001;197002;197003;197004;197005;197006;197007;197008;197009 196999 13 LHDINAQLVEDQGFLDTLK Unmodified 2168.1113 0.11134795 2178 Q10567 AP1B1 AP-1 complex subunit beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 90.966 86.526 3 1.1379E-41 108493 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 114.4 95.364 80142000 53307000 23114000 3720800 0 0 0 0 0 0 0 0 0 0 0 0 29478 2178 26944 247793;247794;247795;247796;247797 197010;197011;197012;197013 197012 4 LHDNPLTDENK Unmodified 1294.6153 0.61534391 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.07 3.35 5 2 21 2 3 2 2 2 1 2 2 2 1 2 2 2 1 2 27.752 26.787 2;3 1.1379E-22 35716 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 186.95 155.52 7464500000 31153000 138540000 126850000 19972000 17739000 21969000 389560000 914670000 421320000 925930000 1961100000 2446400000 15359000 10734000 23209000 29479 4226 26945 247798;247799;247800;247801;247802;247803;247804;247805;247806;247807;247808;247809;247810;247811;247812;247813;247814;247815;247816;247817;247818;247819;247820;247821;247822;247823;247824;247825 197014;197015;197016;197017;197018;197019;197020;197021;197022;197023;197024;197025;197026;197027;197028;197029;197030;197031;197032;197033;197034;197035;197036;197037;197038 197019 22 LHDPEGMGIIPR Oxidation (M) 1349.6762 0.67617003 1328 P33176 KIF5B Kinesin-1 heavy chain yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 46.313 46.437 3 0.0012368 52277 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 57.836 47.604 170590000 0 0 0 11334000 12564000 21843000 20881000 19795000 0 0 0 26342000 30059000 0 27771000 29480 1328 26946 247826;247827;247828;247829;247830;247831;247832;247833 197039;197040;197041;197042;197043;197044;197045;197046 197041 1978 8 LHDPEGMGIIPR Unmodified 1333.6813 0.6812554 1328 P33176 KIF5B Kinesin-1 heavy chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 13 1 1 1 1 2 1 1 1 1 1 1 1 60.29 60.4 3 0.0087275 68978 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 43.897 36.858 143830000 0 0 0 6342100 3842400 13010000 6415600 12223000 7054700 9911300 17750000 15587000 10100000 15382000 26212000 29481 1328 26946 247834;247835;247836;247837;247838;247839;247840;247841;247842;247843;247844;247845;247846 197047;197048;197049;197050;197051;197052 197047 4 LHDRNITCQQEK Unmodified 1540.7416 0.74162383 2724 Q5FWF5 ESCO1 N-acetyltransferase ESCO1 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 9.0361 9.2521 3 0.047588 7608 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 28.859 20.031 5360100 0 0 0 0 0 0 0 0 0 512680 0 4847500 0 0 0 29482 2724 26947 247847;247848 197053 197053 1 LHDRNTYEK Unmodified 1174.5731 0.57308516 763 P02787 TF Serotransferrin yes yes 0 0 1 By MS/MS 10 0 1 1 5.7201 5.8781 3 0.038928 3611 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 41.876 14.573 5269500 0 0 0 0 0 0 0 5269500 0 0 0 0 0 0 0 29483 763 26948 247849 197054 197054 1 LHDSLAIERK Unmodified 1180.6564 0.65642086 2469 Q15005 SPCS2 Signal peptidase complex subunit 2 yes yes 0 0 1 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 24.619 24.858 3 0.003213 26701 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 45.158 29.021 53719000 0 0 0 0 4129800 4683800 3448600 6181500 4558200 4549600 4314400 6914900 4948200 3940100 6050200 29484 2469 26949 247850;247851;247852;247853;247854;247855;247856;247857;247858;247859;247860 197055;197056;197057;197058;197059;197060 197055 6 LHDSSGSQVGTGFK Unmodified 1418.679 0.6790068 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By matching By MS/MS 6.07 3.94 6 1 7 2 3 2 1 1 1 1 1 1 1 26.488 24.376 2;3 1.0549E-17 31127 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 165.66 132.29 256170000 113600000 57068000 66189000 2563000 0 3665300 3056000 2275200 0 2671600 0 0 2807300 2278000 0 29485 1601 26950 247861;247862;247863;247864;247865;247866;247867;247868;247869;247870;247871;247872;247873;247874 197061;197062;197063;197064;197065;197066;197067;197068 197067 6 LHDSVVMVTQESDSSFLVK Oxidation (M) 2136.0409 0.040885122 4297 Q9GZN8 C20orf27 UPF0687 protein C20orf27 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 77.777 72.33 3 2.8296E-08 93516 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.226 83.695 17744000 9781900 0 7962600 0 0 0 0 0 0 0 0 0 0 0 0 29486 4297 26951 247875;247876 197069;197070 197069 5762 2 LHDSVVMVTQESDSSFLVK Unmodified 2120.046 0.0459705 4297 Q9GZN8 C20orf27 UPF0687 protein C20orf27 yes yes 0 0 0 By MS/MS 2 0 1 1 83.18 75.049 3 6.4944E-06 98121 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.506 69.318 12607000 12607000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29487 4297 26951 247877 197071 197071 1 LHDTFGFVDEDVFFQLSAVK Unmodified 2313.1317 0.13174904 3255 Q8IX12 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 98.78 92.952 3 1.621E-128 117564 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 159.26 145.89 100260000 100260000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29488 3255 26952 247878;247879 197072;197073 197073 2 LHDVEHVLIDVGTGYYVEK Unmodified 2185.1055 0.10553429 4013 Q99471 PFDN5 Prefoldin subunit 5 yes yes 0 0 0 By MS/MS By MS/MS 2.67 0.471 1 2 2 1 85.305 80.305 3;4 0.00032727 81945 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 55.33 46.047 28093000 24699000 3394000 0 0 0 0 0 0 0 0 0 0 0 0 0 29489 4013 26953 247880;247881;247882 197074;197075;197076;197077 197074 4 LHDVNSDGFLDEQELEALFTK Unmodified 2419.1543 0.15433498 1992 P80303 NUCB2 Nucleobindin-2;Nesfatin-1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 97.433 90.92 3;4 3.1824E-10 112111 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 88.755 81.394 52316000 44950000 7366400 0 0 0 0 0 0 0 0 0 0 0 0 0 29490 1992 26954 247883;247884;247885 197078;197079;197080 197078 3 LHEAICSSTK Unmodified 1144.5547 0.55465791 2838 Q63HN8 RNF213 E3 ubiquitin-protein ligase RNF213 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 5 2 1 2 17.739 14.261 2;3 0.0079863 21070 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.148 45.352 45825000 22396000 10697000 12732000 0 0 0 0 0 0 0 0 0 0 0 0 29491 2838 26955 247886;247887;247888;247889;247890 197081;197082 197081 2 LHEANNELQK Unmodified 1194.5993 0.59929991 3174 Q86VS8 HOOK3 Protein Hook homolog 3 yes yes 0 0 0 By MS/MS By MS/MS 2 0 4 2 2 14.711 11.888 2;3 0.0036624 15846 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.325 67.751 76339000 0 57864000 18475000 0 0 0 0 0 0 0 0 0 0 0 0 29492 3174 26956 247891;247892;247893;247894 197083;197084 197083 2 LHEDLCEK Unmodified 1042.4753 0.47534495 3314 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 19.707 16.074 2 0.023547 23222 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.279 62.642 60158000 7454700 47250000 5453100 0 0 0 0 0 0 0 0 0 0 0 0 29493 3314 26957 247895;247896;247897 197085 197085 1 LHEEEPPQNMK Unmodified 1350.6238 0.6238001 4242 Q9BY44 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.12 3.72 2 1 5 2 1 1 1 1 1 1 22.268 21.064 3 0.0031677 28174 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.19 50.097 159100000 0 128130000 2433100 0 0 6790800 0 0 0 6273100 5024300 6427400 0 4024500 0 29494 4242 26958 247898;247899;247900;247901;247902;247903;247904;247905 197086;197087;197088;197089;197090;197091;197092 197089 7 LHEEEPPQNMK Oxidation (M) 1366.6187 0.61871473 4242 Q9BY44 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed yes yes 0 1 0 By MS/MS 2.67 0.471 1 2 3 13.896 10.48 2;3 7.6613E-10 14127 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 146.69 123.34 72150000 0 72150000 0 0 0 0 0 0 0 0 0 0 0 0 0 29495 4242 26958 247906;247907;247908 197093;197094 197093 5712 2 LHEEEPPQNMKPQSGNDK Unmodified 2076.9535 0.9534671 4242 Q9BY44 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 28.047 23.708 3 0.012017 33289 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 35.64 33.041 12510000 3359200 0 9150600 0 0 0 0 0 0 0 0 0 0 0 0 29496 4242 26959 247909;247910 197095;197096 197095 2 LHEEGIIYR Unmodified 1128.5928 0.59275797 1210 P26640 VARS Valine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 38.364 38.605 2 0.0034222 42630 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 94.114 50.991 78731000 0 0 0 0 3153100 9138600 4152900 5470600 2667800 6371400 8529500 9538300 7368700 7428500 14912000 29497 1210 26960 247911;247912;247913;247914;247915;247916;247917;247918;247919;247920;247921 197097;197098;197099;197100;197101;197102;197103;197104;197105;197106;197107;197108;197109 197104 13 LHEEHINAGR Unmodified 1174.5843 0.58431855 1789 P56962 STX17 Syntaxin-17 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 10.894 11.009 3 0.016683 9899 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 45.598 25.836 52457000 0 0 0 4330100 2872800 3322900 3440700 3554100 2458800 3857300 0 9704800 7188000 4414700 7312700 29498 1789 26961 247922;247923;247924;247925;247926;247927;247928;247929;247930;247931;247932 197110;197111;197112 197112 3 LHELNQK Unmodified 880.47667 0.47666558 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 9.2112 6.2603 2 1.2821E-05 8252 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 187.14 117.71 459180000 0 176650000 282530000 0 0 0 0 0 0 0 0 0 0 0 0 29499 2344 26962 247933;247934;247935 197113;197114 197114 1 LHELTSLLEEK Unmodified 1310.7082 0.70818166 3566 Q8WVV4 POF1B Protein POF1B yes yes 0 0 0 By MS/MS By MS/MS 10 0 3 2 1 69.446 69.075 2;3 0.010942 79245 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 44.024 28.134 14956000 0 0 0 10319000 0 0 0 4637000 0 0 0 0 0 0 0 29500 3566 26963 247936;247937;247938 197115;197116 197115 1 LHELTVMQDRR Oxidation (M) 1412.7194 0.71943182 1328 P33176 KIF5B Kinesin-1 heavy chain yes yes 0 1 1 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 22.896 22.814 3 0.0032358 23840 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 46.706 29.764 16946000 0 0 0 4605400 580320 7616000 0 4143800 0 0 0 0 0 0 0 29501 1328 26964 247939;247940;247941;247942 197117 197117 1979 1 LHELTVMQDRR Unmodified 1396.7245 0.7245172 1328 P33176 KIF5B Kinesin-1 heavy chain yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 35.804 35.994 3 0.0017989 38774 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 58.676 20.656 145470000 0 0 0 0 3297700 20934000 7128300 13470000 12020000 7442000 14547000 30441000 21830000 14356000 0 29502 1328 26964 247943;247944;247945;247946;247947;247948;247949;247950;247951;247952 197118;197119;197120;197121;197122;197123;197124;197125;197126 197124 6 LHESYGNPLR Unmodified 1184.5938 0.5938206 673 O95619 YEATS4 YEATS domain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 21 2 2 2 2 2 1 2 2 1 2 1 2 34.598 34.752 2;3 0.0026644 38285 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 94.302 47.877 326420000 0 0 0 19406000 15478000 25569000 23812000 20207000 9199300 29273000 57092000 27115000 33938000 18473000 46860000 29503 673 26965 247953;247954;247955;247956;247957;247958;247959;247960;247961;247962;247963;247964;247965;247966;247967;247968;247969;247970;247971;247972;247973 197127;197128;197129;197130;197131;197132;197133;197134;197135;197136;197137;197138;197139;197140 197130 11 LHFFMPGFAPLTSR Oxidation (M) 1635.8232 0.82316861 1963;842;4160;2350;4182;2678 P07437;A6NNZ2;P68371;Q13885;Q9BVA1;Q3ZCM7;Q9BUF5 TUBB;TUBB4B;TUBB2A;TUBB2B;TUBB8;TUBB6 Tubulin beta chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-8 chain;Tubulin beta-6 chain no no 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 83.699 83.848 3 0.00013208 96620 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 69.716 61.935 219470000 0 0 0 0 0 36399000 3140900 10910000 24858000 0 6515500 16335000 6967300 0 114340000 29504 842;1963;2350;4182;2678;4160 26966 247974;247975;247976;247977;247978;247979;247980;247981 197141;197142;197143;197144;197145;197146;197147;197148;197149 197144 1041 9 LHFLAPSEEDEMNDK Unmodified 1773.788 0.7879649 3337 Q8N543 OGFOD1 Prolyl 3-hydroxylase OGFOD1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 67.994 61.984 3 0.041991 82971 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 27.388 23.17 16163000 11838000 0 4325200 0 0 0 0 0 0 0 0 0 0 0 0 29505 3337 26967 247982;247983 197150 197150 1 LHFLAPSEEDEMNDKK Oxidation (M) 1917.8778 0.87784254 3337 Q8N543 OGFOD1 Prolyl 3-hydroxylase OGFOD1 yes yes 0 1 1 By MS/MS 2 0 1 1 55.811 47.663 3 0.0019015 65055 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.482 44.724 15103000 15103000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29506 3337 26968 247984 197151;197152 197151 4927 2 LHFLAPSEEDEMNDKK Unmodified 1901.8829 0.88292792 3337 Q8N543 OGFOD1 Prolyl 3-hydroxylase OGFOD1 yes yes 0 0 1 By MS/MS 2 0 2 2 64.534 56.255 3;4 0.00017816 75859 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.55 60.55 31085000 31085000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29507 3337 26968 247985;247986 197153;197154 197154 1 LHFLMTGYTPLTTDQSVASVR Oxidation (M) 2352.1784 0.17838166 1152 P23258;Q9NRH3 TUBG1;TUBG2 Tubulin gamma-1 chain;Tubulin gamma-2 chain yes no 0 1 0 By MS/MS 10 0 1 1 80.242 80.472 3 7.3183E-06 92761 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.008 46.387 11492000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11492000 29508 1152 26969 247987 197155 197155 1660 1 LHGAIERDPAQHEK Unmodified 1599.8118 0.8117523 4800 Q9P0W2 HMG20B SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 2 1 1 1 1 2 1 1 2 2 2 1 12.776 12.93 3;4 0.0014635 12271 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 37.156 27.31 198300000 0 0 0 11828000 8429100 20541000 11866000 11892000 17720000 15549000 9176500 34047000 27161000 17386000 12710000 29509 4800 26970 247988;247989;247990;247991;247992;247993;247994;247995;247996;247997;247998;247999;248000;248001;248002;248003;248004 197156;197157;197158;197159;197160;197161;197162;197163 197162 5 LHGILCDDMGLGK Oxidation (M) 1443.685 0.68502015 238 O14981 BTAF1 TATA-binding protein-associated factor 172 yes yes 0 1 0 By MS/MS 2 0 1 1 63.808 55.529 3 0.0035429 74836 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.04 45.528 19005000 19005000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29510 238 26971 248005 197164 197164 326 1 LHGILCDDMGLGK Unmodified 1427.6901 0.69010553 238 O14981 BTAF1 TATA-binding protein-associated factor 172 yes yes 0 0 0 By MS/MS 2 0 1 1 77.305 69.174 3 0.032637 91143 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.023 44.511 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29511 238 26971 248006 197165 197165 1 LHGTAQQLLQDSK Unmodified 1437.7576 0.75759147 2604 Q16513 PKN2 Serine/threonine-protein kinase N2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.8 3.53 6 1 18 2 3 2 2 2 2 2 1 2 1 2 1 2 1 43.197 41.521 2;3 1.2653E-11 45434 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 121.6 70.257 771620000 464730000 83022000 30409000 10664000 15057000 32969000 22698000 14632000 16745000 15440000 29486000 0 16345000 19426000 0 29512 2604 26972 248007;248008;248009;248010;248011;248012;248013;248014;248015;248016;248017;248018;248019;248020;248021;248022;248023;248024;248025;248026;248027;248028;248029;248030;248031 197166;197167;197168;197169;197170;197171;197172;197173;197174;197175;197176;197177;197178;197179;197180;197181;197182;197183;197184;197185;197186;197187;197188;197189;197190;197191;197192;197193;197194 197179 23 LHGTVVEGR Unmodified 966.52468 0.52467841 309 O43251;Q9NWB1 RBFOX2;RBFOX1 RNA binding protein fox-1 homolog 2;RNA binding protein fox-1 homolog 1 yes no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.483 13.639 2 0.0052023 12171 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.438 26.884 66670000 0 0 0 4137900 2820000 3845800 4265700 3064200 4269900 6438100 5935900 8884200 9547500 6424300 7036800 29513 309 26973 248032;248033;248034;248035;248036;248037;248038;248039;248040;248041;248042;248043 197195;197196;197197;197198;197199;197200 197197 6 LHGVNINVEASK Unmodified 1279.6884 0.68844927 4209 Q9BWF3;Q9BQ04 RBM4;RBM4B RNA-binding protein 4;RNA-binding protein 4B yes no 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 5 3 1 1 52.002 45.254 2;3 0.00092516 59148 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.528 50.031 143620000 116070000 20455000 7088600 0 0 0 0 0 0 0 0 0 0 0 0 29514 4209 26974 248044;248045;248046;248047;248048 197201;197202;197203;197204;197205 197201 4 LHGWAPGPDYQK Unmodified 1367.6622 0.66223452 2736 Q5JSZ5 PRRC2B Protein PRRC2B yes yes 0 0 0 By MS/MS 2 0 1 1 53.105 45.09 3 0.0024927 62037 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.354 44.06 9405200 9405200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29515 2736 26975 248049 197206;197207 197207 2 LHHPAQGSAAGTPYPSSASLR Unmodified 2104.045 0.044999718 4630 Q9NSV4 DIAPH3 Protein diaphanous homolog 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 2 2 1 2 1 2 1 2 2 2 2 1 38.474 38.635 3;4 3.833E-12 42901 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 82.609 77.279 271800000 0 0 0 15424000 15342000 12138000 28926000 11301000 18223000 15419000 35299000 42857000 31799000 26360000 18713000 29516 4630 26976 248050;248051;248052;248053;248054;248055;248056;248057;248058;248059;248060;248061;248062;248063;248064;248065;248066;248067;248068;248069 197208;197209;197210;197211;197212;197213;197214;197215;197216;197217;197218;197219;197220;197221;197222;197223;197224;197225 197211 16 LHHQNQQQIQQQQQQLQR Unmodified 2310.169 0.16897145 3971 Q96RN5 MED15 Mediator of RNA polymerase II transcription subunit 15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 21.619 21.826 3;4 1.439E-53 22736 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 159.22 143.96 413380000 0 0 0 12269000 9365600 38965000 31506000 18636000 31608000 47485000 48041000 58642000 37509000 27141000 52209000 29517 3971 26977 248070;248071;248072;248073;248074;248075;248076;248077;248078;248079;248080;248081;248082;248083;248084;248085;248086;248087;248088;248089;248090;248091;248092;248093 197226;197227;197228;197229;197230;197231;197232;197233;197234;197235;197236;197237;197238;197239;197240;197241;197242;197243;197244;197245;197246;197247;197248 197227 21 LHIFSGAHGPEK Unmodified 1291.6673 0.6673199 2427 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 35.914 36.134 3 0.0039521 38604 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 45.357 22.716 77844000 0 0 0 4829800 0 11441000 0 7468300 10446000 3657300 0 11589000 0 9158200 19255000 29518 2427 26978 248094;248095;248096;248097;248098;248099;248100;248101 197249;197250;197251;197252 197252 4 LHIIEVGQPAAGNQPFVK Unmodified 1917.0472 0.047231549 1723 P53675 CLTCL1 Clathrin heavy chain 2 yes yes 0 0 0 By MS/MS 2 0 1 1 81.714 73.583 3 9.7634E-05 96428 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.605 56.491 13149000 13149000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29519 1723 26979 248102 197253 197253 1 LHIIEVGTPPTGNQPFPK Unmodified 1944.0469 0.046897198 2040 Q00610 CLTC Clathrin heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.21 3.66 4 3 12 3 3 1 1 1 1 1 1 1 1 1 1 1 1 1 78.103 76.439 2;3 1.9794E-47 97768 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.53 98.467 3345500000 2272400000 132430000 175760000 14733000 16537000 62857000 24067000 57668000 37215000 81282000 57789000 98289000 35377000 53144000 225910000 29520 2040 26980 248103;248104;248105;248106;248107;248108;248109;248110;248111;248112;248113;248114;248115;248116;248117;248118;248119;248120;248121 197254;197255;197256;197257;197258;197259;197260;197261;197262;197263;197264;197265;197266;197267;197268;197269;197270;197271;197272;197273;197274;197275 197264 22 LHIPYAGETLK Unmodified 1240.6816 0.68157298 4731 Q9NXR7 BRE BRCA1-A complex subunit BRE yes yes 0 0 0 By MS/MS By MS/MS 2 0 4 2 2 72.144 66.238 2;3 0.0013436 88339 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.374 55.016 113000000 89429000 0 23575000 0 0 0 0 0 0 0 0 0 0 0 0 29521 4731 26981 248122;248123;248124;248125 197276;197277;197278;197279 197277 4 LHISPSNMTNQNTNEYLEK Oxidation (M) 2248.043 0.043010387 2314 Q13547 HDAC1 Histone deacetylase 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.12 3.72 4 2 10 3 2 1 1 1 1 1 1 1 1 1 1 1 51.731 49.363 2;3 2.7664E-96 67444 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 191.35 171.26 753480000 329520000 59109000 62592000 26572000 31244000 32534000 43187000 0 0 22227000 36977000 0 40595000 35351000 33572000 29522 2314 26982 248126;248127;248128;248129;248130;248131;248132;248133;248134;248135;248136;248137;248138;248139;248140;248141 197280;197281;197282;197283;197284;197285;197286;197287;197288;197289;197290;197291;197292;197293;197294;197295;197296;197297;197298;197299;197300;197301 197291 3777 22 LHISPSNMTNQNTNEYLEK Unmodified 2232.0481 0.048095765 2314 Q13547 HDAC1 Histone deacetylase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.56 3.86 3 1 5 1 2 1 1 1 1 1 1 67.74 62.079 3 8.2672E-96 82041 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 188.71 178.92 973980000 752540000 159400000 62041000 0 0 0 0 0 0 0 0 0 0 0 0 29523 2314 26982 248142;248143;248144;248145;248146;248147;248148;248149;248150 197302;197303;197304;197305;197306;197307;197308;197309;197310;197311;197312 197309 11 LHISPSNMTNQNTPEYMEK 2 Oxidation (M) 2265.0042 0.0041820395 3658 Q92769 HDAC2 Histone deacetylase 2 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41.231 40.304 3 5.3961E-49 44537 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 131.67 126.34 652270000 250210000 10151000 72507000 21956000 28193000 23382000 26763000 17993000 23573000 33775000 26778000 29736000 33291000 20658000 33301000 29524 3658 26983 248151;248152;248153;248154;248155;248156;248157;248158;248159;248160;248161;248162;248163;248164;248165 197313;197314;197315;197316;197317;197318;197319;197320;197321;197322;197323;197324;197325;197326;197327;197328;197329;197330;197331;197332;197333;197334 197331 5177;5178 22 LHISPSNMTNQNTPEYMEK Oxidation (M) 2249.0093 0.0092674174 3658 Q92769 HDAC2 Histone deacetylase 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.58 3.64 7 1 18 4 2 2 1 1 1 1 2 2 2 1 2 2 2 1 52.69 51.432 2;3 1.2751E-102 65242 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 193.8 176.2 3697000000 792420000 71782000 82315000 110710000 131280000 234710000 103440000 129000000 236980000 365780000 279730000 367140000 275870000 196670000 319120000 29525 3658 26983 248166;248167;248168;248169;248170;248171;248172;248173;248174;248175;248176;248177;248178;248179;248180;248181;248182;248183;248184;248185;248186;248187;248188;248189;248190;248191 197335;197336;197337;197338;197339;197340;197341;197342;197343;197344;197345;197346;197347;197348;197349 197348 5177;5178 15 LHISPSNMTNQNTPEYMEK Unmodified 2233.0144 0.014352795 3658 Q92769 HDAC2 Histone deacetylase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.39 3.7 5 1 12 2 2 2 1 1 1 1 1 1 1 1 1 1 1 1 62.009 60.149 2;3 4.3891E-141 67709 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 198.51 189.46 1152300000 589090000 73829000 42748000 12372000 16251000 41196000 15815000 28320000 22296000 44663000 43837000 41227000 36089000 39728000 104800000 29526 3658 26983 248192;248193;248194;248195;248196;248197;248198;248199;248200;248201;248202;248203;248204;248205;248206;248207;248208;248209 197350;197351;197352;197353;197354;197355;197356;197357;197358;197359;197360;197361;197362;197363;197364 197361 15 LHIVQVVCK Unmodified 1094.627 0.62703499 140 O00299 CLIC1 Chloride intracellular channel protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 46.361 46.935 2 0.0037221 52176 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 89.142 77.731 20592000 0 0 0 0 0 0 0 0 0 0 0 4576600 0 5957900 10057000 29527 140 26984 248210;248211;248212;248213;248214 197365;197366;197367;197368;197369 197369 5 LHKPPADSGVDLR Unmodified 1403.7521 0.75211216 285 O15427 SLC16A3 Monocarboxylate transporter 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 28.489 29.032 3 0.00024658 30662 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 80.96 58.904 129940000 0 0 0 0 0 0 0 0 0 0 27575000 36354000 0 27638000 38373000 29528 285 26985 248215;248216;248217;248218 197370;197371;197372;197373;197374 197374 5 LHLGSSLDSSNASVSSSLSLASQK Unmodified 2374.1976 0.19759677 3214 Q8IU85 CAMK1D Calcium/calmodulin-dependent protein kinase type 1D yes yes 0 0 0 By MS/MS 2 0 2 2 79.958 71.827 3 1.521E-22 94214 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.807 68.984 13708000 13708000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29529 3214 26986 248219;248220 197375;197376 197375 1 LHLNQNGDHNTK Unmodified 1389.6749 0.67492447 3192 Q86X83 COMMD2 COMM domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.72 2 13 1 1 1 1 1 1 1 1 1 1 1 2 1 1 8.4788 8.1767 3 0.0016798 11344 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 62.14 46.003 236220000 144780000 0 9823300 3765000 2948500 6360600 3816800 5075000 4306700 4901100 17334000 8554300 8185500 5465400 10907000 29530 3192 26987 248221;248222;248223;248224;248225;248226;248227;248228;248229;248230;248231;248232;248233;248234;248235 197377;197378;197379;197380;197381 197378 5 LHLQEVQLMTK Unmodified 1338.733 0.73295662 1575 P49454 CENPF Centromere protein F yes yes 0 0 0 By MS/MS 2 0 1 1 75.575 67.444 3 0.01992 89068 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 32.859 27.644 3504400 3504400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29531 1575 26988 248236 197382 197382 1 LHLSSPDNFR Unmodified 1184.5938 0.5938206 5014 Q9UM54 MYO6 Unconventional myosin-VI yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 46.908 47.24 3 0.0068361 52533 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.461 42.108 38515000 0 0 0 0 0 4193900 4358200 0 3518700 0 0 9537000 6738800 4039300 6129200 29532 5014 26989 248237;248238;248239;248240;248241;248242;248243 197383;197384;197385;197386;197387;197388 197388 6 LHLVDLAGSER Unmodified 1208.6513 0.65133548 632;5188 O95239;Q2VIQ3;Q6ZMV9;Q9Y496 KIF4A;KIF4B;KIF6;KIF3A Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B;Kinesin-like protein KIF6;Kinesin-like protein KIF3A no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 1 2 1 2 2 2 2 2 2 1 2 58.666 58.845 2;3 0.00045514 66299 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 63.624 0 113660000 0 0 0 5401600 3090100 12023000 6459800 8655900 9756900 11258000 11025000 12878000 11839000 5617200 15657000 29533 632;5188 26990 248244;248245;248246;248247;248248;248249;248250;248251;248252;248253;248254;248255;248256;248257;248258;248259;248260;248261;248262;248263 197389;197390;197391;197392;197393;197394;197395;197396;197397;197398;197399;197400;197401;197402;197403 197399 14 LHNAANANQK Unmodified 1079.5472 0.54720476 470 O75175 CNOT3 CCR4-NOT transcription complex subunit 3 yes yes 0 0 0 By MS/MS 2 0 1 1 1.4293 -1.8652 2 2.0077E-16 1200 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 190.52 155.69 27499000 27499000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29534 470 26991 248264 197404;197405;197406 197405 3 LHNAIEGGTQLSR Unmodified 1394.7266 0.72662569 436 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 2 1 1 1 1 2 31.637 31.988 2;3 0.00018571 35181 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 82.069 61.862 115360000 0 0 0 0 0 14081000 0 15068000 3232300 25817000 6682600 6099800 6376700 4812500 33189000 29535 436 26992 248265;248266;248267;248268;248269;248270;248271;248272;248273;248274;248275 197407;197408;197409;197410;197411;197412;197413;197414;197415;197416;197417;197418 197407 10 LHNELQSGSLR Unmodified 1252.6524 0.65239812 2739 Q5JTH9 RRP12 RRP12-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.652 28.847 3 0.004232 31619 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 43.502 33.451 102670000 0 0 0 10531000 6910900 5383600 4185100 8353700 3599100 7281600 12030000 11074000 10962000 11580000 10775000 29536 2739 26993 248276;248277;248278;248279;248280;248281;248282;248283;248284;248285;248286;248287 197419;197420;197421;197422;197423;197424;197425;197426;197427 197425 4 LHNLAQFEGGESK Unmodified 1428.6997 0.69974224 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 1 1 1 2 2 2 2 1 2 1 1 40.38 40.582 2;3 0.00096521 44809 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 62.924 53.391 202050000 0 0 0 9604800 9117200 11389000 14424000 18545000 16102000 21875000 25120000 16533000 22071000 16230000 21039000 29537 5189 26994 248288;248289;248290;248291;248292;248293;248294;248295;248296;248297;248298;248299;248300;248301;248302;248303;248304 197428;197429;197430;197431;197432;197433;197434;197435;197436;197437;197438;197439;197440;197441;197442 197436 15 LHNQEQVIK Unmodified 1107.6037 0.60365701 3992 Q96SN8 CDK5RAP2 CDK5 regulatory subunit-associated protein 2 yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 18.672 15.11 2 0.037989 18611 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 61.999 19.89 10908000 5916200 0 4992000 0 0 0 0 0 0 0 0 0 0 0 0 29538 3992 26995 248305;248306 197443 197443 1 LHNQLQELK Unmodified 1121.6193 0.61930707 4199 Q9BW19 KIFC1 Kinesin-like protein KIFC1 yes yes 0 0 0 By MS/MS 10 0 1 1 28.45 29.145 2 0.038377 30476 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.816 22.164 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29539 4199 26996 248307 197444 197444 1 LHNQQALSSSIEEGLR Unmodified 1780.9068 0.9067749 2130 Q06587 RING1 E3 ubiquitin-protein ligase RING1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 57.388 57.58 3 0.00037654 65338 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 61.265 52.664 165990000 0 0 0 0 7849800 23492000 10000000 11934000 0 19995000 25141000 14090000 0 15793000 37691000 29540 2130 26997 248308;248309;248310;248311;248312;248313;248314;248315;248316 197445;197446;197447;197448;197449;197450;197451;197452;197453;197454 197450 9 LHNQVNGTEWSWK Unmodified 1597.7637 0.76373948 237 O14980 XPO1 Exportin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 2 1 1 1 1 1 1 1 1 1 1 57.283 56.129 2;3 0.0048427 62263 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.528 55.842 145110000 77670000 0 0 0 0 8661800 2537300 3699800 3420200 5786900 5694500 7449300 6835500 6232500 17125000 29541 237 26998 248317;248318;248319;248320;248321;248322;248323;248324;248325;248326;248327;248328 197455;197456;197457 197455 1 LHNSLIGTK Unmodified 981.56073 0.56072956 2033 Q00341 HDLBP Vigilin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 1 26.152 25.055 2 0.0039527 26222 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 97.431 44.747 489930000 229900000 62071000 45732000 8137900 7490900 8501800 10420000 6298700 7356900 20363000 8856300 24700000 0 11204000 38898000 29542 2033 26999 248329;248330;248331;248332;248333;248334;248335;248336;248337;248338;248339;248340;248341;248342;248343 197458;197459;197460;197461;197462;197463;197464;197465;197466;197467;197468;197469 197460 10 LHPASGADSK Unmodified 981.48796 0.48795855 2972 Q6UB99 ANKRD11 Ankyrin repeat domain-containing protein 11 yes yes 0 0 0 By matching By MS/MS 2.5 0.5 1 1 1 1 6.3056 2.873 2 0.011777 4931 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.607 25.54 12821000 144620 12677000 0 0 0 0 0 0 0 0 0 0 0 0 0 29543 2972 27000 248344;248345 197470 197470 1 LHPDVPTDK Unmodified 1020.524 0.52400971 2989 Q6W2J9 BCOR BCL-6 corepressor yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching 7 3.87 3 5 1 1 1 1 1 1 1 1 24.974 23.514 2 0.0089039 30063 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 88.819 42.393 48847000 2161100 27056000 4731300 0 0 2433900 0 2365500 0 2219100 0 0 0 3128500 4751700 29544 2989 27001 248346;248347;248348;248349;248350;248351;248352;248353 197471;197472;197473 197473 3 LHPELSGPGVAAK Unmodified 1274.6983 0.69828568 2868 Q6DD87 ZNF787 Zinc finger protein 787 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 40.402 40.556 3 0.0018153 44007 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.394 31.09 83285000 0 0 0 9810800 4907500 8176800 6658000 3774300 2950300 12405000 0 7964100 5973800 4369900 16295000 29545 2868 27002 248354;248355;248356;248357;248358;248359;248360;248361;248362;248363;248364 197474;197475;197476;197477;197478;197479;197480;197481;197482;197483 197477 10 LHPEMSNLDLTK Oxidation (M) 1412.697 0.69696505 1053 P17480 UBTF Nucleolar transcription factor 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.65 1.63 1 22 1 2 2 1 2 2 2 2 2 2 2 1 2 39.755 39.764 2;3 0.00097818 43657 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 80.555 64.418 489480000 0 0 60478000 40639000 32959000 27974000 32844000 23348000 21371000 43217000 45132000 93323000 32532000 6317000 29342000 29546 1053 27003 248365;248366;248367;248368;248369;248370;248371;248372;248373;248374;248375;248376;248377;248378;248379;248380;248381;248382;248383;248384;248385;248386;248387 197484;197485;197486;197487;197488;197489;197490;197491;197492;197493;197494;197495 197493 1472 4 LHPEMSNLDLTK Unmodified 1396.7021 0.70205043 1053 P17480 UBTF Nucleolar transcription factor 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8 3.46 4 12 2 2 1 1 1 1 1 1 1 1 2 1 1 58.051 56.635 2;3 9.3616E-15 77712 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 135.6 112.88 606760000 56028000 0 62516000 28206000 25317000 48310000 28125000 34818000 25759000 44920000 54498000 132660000 33497000 32114000 0 29547 1053 27003 248388;248389;248390;248391;248392;248393;248394;248395;248396;248397;248398;248399;248400;248401;248402;248403 197496;197497;197498;197499;197500;197501;197502;197503;197504;197505;197506;197507;197508;197509 197501 4 LHPTYTVDMPSYVPK Oxidation (M) 1762.86 0.86000763 4814 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 58.804 56.979 3 0.00076752 65176 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 46.66 41.342 106470000 27507000 0 9205800 9303100 11055000 0 14714000 0 0 15932000 0 0 18753000 0 0 29548 4814 27004 248404;248405;248406;248407;248408;248409;248410 197510;197511 197511 6177 2 LHPTYTVDMPSYVPK Unmodified 1746.8651 0.86509301 4814 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 0 0 0 By MS/MS 2 0 1 1 76.071 73.308 3 0.0098921 89352 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 39.629 27.246 14653000 0 0 14653000 0 0 0 0 0 0 0 0 0 0 0 0 29549 4814 27004 248411 197512;197513 197512 2 LHQDTSSVGNFISTK Unmodified 1632.8107 0.81074925 341 O43548 TGM5 Protein-glutamine gamma-glutamyltransferase 5 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 51.624 51.385 3 0.0025683 58876 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 43.861 35.262 18864000 0 0 0 9264800 0 0 0 9599300 0 0 0 0 0 0 0 29550 341 27005 248412;248413 197514 197514 1 LHQEDNDYINASLIK Unmodified 1771.8741 0.87407779 1068 P18031 PTPN1 Tyrosine-protein phosphatase non-receptor type 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching 8 3.46 1 3 1 1 1 1 64.615 63.945 3 0.013257 73050 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 24.706 20.671 18042000 0 0 2966500 0 0 0 0 0 0 5183900 4396900 0 0 0 5494900 29551 1068 27006 248414;248415;248416;248417 197515;197516 197515 2 LHQELGAK Unmodified 894.49232 0.49231565 1355 P35573 AGL Glycogen debranching enzyme;4-alpha-glucanotransferase;Amylo-alpha-1,6-glucosidase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 12.392 9.2113 2 0.0069755 12515 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.25 43.211 228010000 143610000 24639000 59765000 0 0 0 0 0 0 0 0 0 0 0 0 29552 1355 27007 248418;248419;248420 197517;197518 197517 1 LHQLAMQQSHFPMTHGNTGFSGIESSSPEVK 2 Oxidation (M) 3413.5769 0.57687327 2521 Q15366 PCBP2 Poly(rC)-binding protein 2 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 2 2 60.085 60.37 4;5 1.7186E-132 67579 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 145.67 140.29 448520000 0 0 0 0 0 32209000 0 13700000 20441000 23235000 0 26758000 37254000 0 294920000 29553 2521 27008 248421;248422;248423;248424;248425;248426;248427;248428;248429 197519;197520;197521;197522;197523;197524;197525 197520 4153;4154 6 LHQLSGSDQLESTAHSR Unmodified 1864.9028 0.90275216 391 O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 1 2 2 2 2 2 2 2 2 32.376 32.568 3;4 0.00016304 35737 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 64.454 60.283 178360000 0 0 0 7145800 7567500 11543000 7757600 7927800 8740000 14203000 17127000 29313000 15124000 15424000 36488000 29554 391 27009 248430;248431;248432;248433;248434;248435;248436;248437;248438;248439;248440;248441;248442;248443;248444;248445;248446;248447;248448;248449;248450;248451;248452 197526;197527;197528;197529;197530;197531;197532;197533;197534;197535;197536 197526 9 LHQSVTK Unmodified 811.4552 0.45520186 5047 Q9UP83 COG5 Conserved oligomeric Golgi complex subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 5.1804 2.1265 2 0.012413 2286 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 124.37 16.629 480550000 330780000 129070000 20702000 0 0 0 0 0 0 0 0 0 0 0 0 29555 5047 27010 248453;248454;248455;248456 197537;197538;197539;197540;197541 197539 5 LHRTELATQEK Unmodified 1324.7099 0.709913 2501 Q15149 PLEC Plectin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 11.815 11.569 3 0.00024246 10398 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 83.182 57.065 188120000 41939000 0 0 10181000 9171200 9809400 9171000 9288500 9099700 12453000 0 26748000 16458000 13236000 20562000 29556 2501 27011 248457;248458;248459;248460;248461;248462;248463;248464;248465;248466;248467;248468 197542;197543;197544;197545;197546;197547;197548;197549;197550 197543 8 LHSEGDQLLAAEHPGR Unmodified 1728.8543 0.8543454 399 O60437 PPL Periplakin yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 41.475 41.747 3 0.00041763 46672 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 60.209 53.481 39334000 0 0 0 6128400 0 0 0 7363700 2587300 3978300 4719300 4606500 0 3675600 6274900 29557 399 27012 248469;248470;248471;248472;248473;248474;248475;248476 197551;197552 197551 2 LHSELDMVK Oxidation (M) 1086.5379 0.53794521 531 O75674 TOM1L1 TOM1-like protein 1 yes yes 0 1 0 By MS/MS 2 0 1 1 28.616 25.509 2 0.0014739 32355 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 133.86 99.859 22595000 0 0 22595000 0 0 0 0 0 0 0 0 0 0 0 0 29558 531 27013 248477 197553 197553 693 1 LHSFESHK Unmodified 983.48248 0.48247924 2169 Q09028 RBBP4 Histone-binding protein RBBP4 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 10.77 7.6773 2 0.032367 12340 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.255 56.407 38084000 34526000 0 3557900 0 0 0 0 0 0 0 0 0 0 0 0 29559 2169 27014 248478;248479 197554 197554 1 LHSSNPNLSTLDFGEEK Unmodified 1886.901 0.90102082 4401 Q9H4L5 OSBPL3 Oxysterol-binding protein-related protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.867 64.955 3 0.00014102 73540 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 66.335 62.093 102020000 0 0 0 5085800 5980300 8197900 6101300 4601800 8511600 12168000 8580500 11409000 7949200 6692900 16744000 29560 4401 27015 248480;248481;248482;248483;248484;248485;248486;248487;248488;248489;248490;248491 197555;197556;197557;197558;197559;197560;197561;197562;197563;197564;197565;197566 197562 12 LHSTSAQVDDLK Unmodified 1312.6623 0.6622941 4740 Q9NYC9 DNAH9 Dynein heavy chain 9, axonemal yes yes 0 0 0 By MS/MS 2 0 1 1 53.028 45.013 3 0.043912 61617 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 23.749 0.52329 22916000 22916000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29561 4740 27016 248492 197567 197567 1 LHSVCTLSK Unmodified 1043.5434 0.54336494 936 P11172 UMPS Uridine 5'-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5'-phosphate decarboxylase yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 19.944 20.186 2 0.009287 19346 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.169 45.038 29141000 0 0 0 0 793180 4211700 1625700 1905600 0 2783300 4549900 4076900 2341500 2675900 4177100 29562 936 27017 248493;248494;248495;248496;248497;248498;248499;248500;248501;248502 197568;197569;197570;197571 197569 4 LHSYSSPSTK Unmodified 1105.5404 0.54038805 3997 Q96T37 RBM15 Putative RNA-binding protein 15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 10.244 10.432 2 0.030985 8975 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 42.864 21.564 12733000 0 0 0 0 732880 0 846400 0 892680 1278800 1883100 1930300 1371500 1573400 2223600 29563 3997 27018 248503;248504;248505;248506;248507;248508;248509;248510;248511 197572;197573;197574 197574 3 LHTFESHK Unmodified 997.49813 0.49812931 2615 Q16576 RBBP7 Histone-binding protein RBBP7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 9.9182 8.8207 2 0.0065186 5534 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.19 75.265 151440000 109900000 25884000 0 0 0 2676500 0 0 0 0 0 3348700 3359500 0 6263800 29564 2615 27019 248512;248513;248514;248515;248516;248517 197575;197576;197577;197578;197579 197577 5 LHTLEEEK Unmodified 997.50803 0.50802529 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 14.373 14.436 2 0.02954 13888 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 102.71 78.741 88165000 0 0 0 5948200 5357400 11894000 6723100 8250900 5640000 15636000 0 0 13588000 15128000 0 29565 5071 27020 248518;248519;248520;248521;248522;248523;248524;248525;248526 197580 197580 0 LHTLSQIETSIATVQEK Unmodified 1897.0157 0.015656649 3953 Q96Q15 SMG1 Serine/threonine-protein kinase SMG1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 83.24 76.814 3 3.652E-05 98317 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.669 77.423 44097000 27330000 16766000 0 0 0 0 0 0 0 0 0 0 0 0 0 29566 3953 27021 248527;248528 197581;197582 197582 2 LHTTGDLTMDTDLTAANGK Unmodified 1973.9364 0.93642005 315 O43301 HSPA12A Heat shock 70 kDa protein 12A yes yes 0 0 0 By MS/MS 2 0 1 1 67.994 62.095 3 0.008497 79254 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 41.524 31.425 15731000 0 15731000 0 0 0 0 0 0 0 0 0 0 0 0 0 29567 315 27022 248529 197583 197583 0 LHTVGGPGSARPR Unmodified 1303.7109 0.71091605 3968 Q96RK0 CIC Protein capicua homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.383 14.544 3 0.00046911 13806 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 83.182 70.304 129120000 0 0 0 9284400 7851400 10251000 7926600 12232000 9433500 9220900 9840200 13490000 11756000 9471000 18361000 29568 3968 27023 248530;248531;248532;248533;248534;248535;248536;248537;248538;248539;248540;248541 197584;197585;197586;197587;197588;197589 197586 6 LHTVQPK Unmodified 821.47594 0.4759373 1752 P55036;A2A3N6 PSMD4;PIPSL 26S proteasome non-ATPase regulatory subunit 4;Putative PIP5K1A and PSMD4-like protein yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 3 9 1 1 1 1 1 1 1 1 1 1 1 1 8.6057 7.8884 2 0.012413 12502 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 131.3 56.584 1429300000 802460000 208870000 383330000 3615000 4827300 4764900 1684300 0 1692600 9749100 0 0 1671400 1089600 5542600 29569 1752 27024 248542;248543;248544;248545;248546;248547;248548;248549;248550;248551;248552;248553 197590;197591;197592;197593;197594;197595;197596 197594 6 LHVDPENFR Unmodified 1125.5567 0.55670682 89;1967 CON__Q3SX09;P68871;P02042 HBB;HBD Hemoglobin subunit beta;LVV-hemorphin-7;Spinorphin;Hemoglobin subunit delta no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 46.955 47.189 2 0.0051666 53032 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 81.548 67.033 + 76224000 0 0 0 0 3740800 4939600 4331200 12164000 3224100 6406800 7892100 10178000 8464300 6931900 7951100 29570 89;1967 27025 248554;248555;248556;248557;248558;248559;248560;248561;248562;248563;248564 197597;197598;197599;197600;197601;197602;197603;197604 197602 8 LHVENDEK Unmodified 982.47197 0.47197413 3509 Q8TDY2 RB1CC1 RB1-inducible coiled-coil protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 8.9188 5.9707 2 0.038396 8030 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 71.342 17.138 15290000 0 12856000 2433800 0 0 0 0 0 0 0 0 0 0 0 0 29571 3509 27026 248565;248566;248567 197605;197606 197605 2 LHVENEDK Unmodified 982.47197 0.47197413 1538 P48444 ARCN1 Coatomer subunit delta yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 7.3905 7.4652 2 0.013039 5627 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 73.26 8.0079 11884000 0 0 0 998530 858720 0 1813200 0 0 0 0 2179200 2196700 0 3838100 29572 1538 27027 248568;248569;248570;248571;248572;248573;248574 197607;197608;197609 197608 3 LHVEVAK Unmodified 794.46504 0.46503826 360 O43719 HTATSF1 HIV Tat-specific factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 7.12 3.72 4 2 10 2 2 2 1 1 1 1 1 1 1 1 1 1 22.303 20.891 2 0.014121 27183 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 121.29 32.558 1655900000 883330000 127790000 201490000 19028000 22947000 23844000 21887000 0 15630000 48629000 64444000 0 61415000 82212000 83308000 29573 360 27028 248575;248576;248577;248578;248579;248580;248581;248582;248583;248584;248585;248586;248587;248588;248589;248590 197610;197611;197612;197613;197614;197615;197616;197617;197618;197619;197620;197621;197622;197623 197620 14 LHVGNISPTCTNK Unmodified 1439.7191 0.71909747 4209 Q9BWF3 RBM4 RNA-binding protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.8 2.86 3 17 2 1 2 2 1 2 1 2 1 2 2 2 38.37 37.539 2;3 3.4543E-21 52210 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 176.48 164.53 298450000 135190000 0 1391000 11670000 12060000 10849000 15554000 13795000 0 23498000 6687100 0 25684000 4178200 37893000 29574 4209 27029 248591;248592;248593;248594;248595;248596;248597;248598;248599;248600;248601;248602;248603;248604;248605;248606;248607;248608;248609;248610 197624;197625;197626;197627;197628;197629;197630;197631;197632 197627 8 LHVSEQNAQR Unmodified 1180.5949 0.59488324 49 CON__ENSEMBL:ENSBTAP00000032840 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 2 2 11.957 12.096 2;3 0.011956 11313 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 51.854 20.781 + 59313000 0 0 0 2760400 4623600 6480600 7677600 4628600 3432000 6671700 1285000 8070900 7576000 6106600 0 29575 49 27030 248611;248612;248613;248614;248615;248616;248617;248618;248619;248620;248621;248622;248623 197633;197634;197635 197634 1 LHVSGESSVFSESGK Unmodified 1548.742 0.74200098 41 Q9H707;B7Z6K7 ZNF552;ZNF814 Zinc finger protein 552;Putative uncharacterized zinc finger protein 814 no no 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 53.13 46.419 2;3 0.0082548 63811 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.836 53.37 15752000 13199000 0 2552500 0 0 0 0 0 0 0 0 0 0 0 0 29576 41 27031 248624;248625;248626 197636;197637 197636 2 LHVSTINLQK Unmodified 1151.6663 0.66625727 1454 P42345 MTOR Serine/threonine-protein kinase mTOR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 47.677 47.078 2;3 0.0075967 51406 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.058 24.671 54808000 11177000 0 0 0 4097000 5084600 0 4077400 2667300 5672200 6661100 5992000 0 3850100 5529600 29577 1454 27032 248627;248628;248629;248630;248631;248632;248633;248634;248635;248636 197638;197639;197640 197639 2 LHYAFQTEGK Unmodified 1192.5877 0.58767259 2531;1672 Q15418;P51812;Q15349;Q9UK32 RPS6KA1;RPS6KA3;RPS6KA2;RPS6KA6 Ribosomal protein S6 kinase alpha-1;Ribosomal protein S6 kinase alpha-3;Ribosomal protein S6 kinase alpha-2;Ribosomal protein S6 kinase alpha-6 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38.31 37.403 3 0.0024118 52518 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.224 50.989 1289600000 1071400000 7464900 105280000 3250600 4869300 10751000 4441600 8542100 4187300 9807100 7558400 8140700 10752000 9740200 23419000 29578 2531;1672 27033 248637;248638;248639;248640;248641;248642;248643;248644;248645;248646;248647;248648;248649;248650;248651 197641;197642;197643;197644;197645;197646;197647;197648 197645 8 LHYCVSCAIHSK Unmodified 1473.6857 0.68568885 1918 P62854;Q5JNZ5 RPS26;RPS26P11 40S ribosomal protein S26;Putative 40S ribosomal protein S26-like 1 yes no 0 0 0 By MS/MS 10 0 1 1 25.167 25.168 3 0.014089 26744 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 39.625 7.0008 18336000 0 0 0 0 0 18336000 0 0 0 0 0 0 0 0 0 29579 1918 27034 248652 197649 197649 1 LHYGDLTDSTCLVK Unmodified 1620.7818 0.78175731 411 O60547 GMDS GDP-mannose 4,6 dehydratase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.56 3.62 4 1 11 1 3 1 1 1 1 1 1 1 1 1 1 1 1 66.963 65.336 2;3 2.1233E-29 84890 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.78 92.267 342330000 43295000 142520000 78672000 2987200 0 6714400 6196800 4187400 10301000 8360300 8632900 7393000 4541000 7937800 10589000 29580 411 27035 248653;248654;248655;248656;248657;248658;248659;248660;248661;248662;248663;248664;248665;248666;248667;248668 197650;197651;197652;197653;197654;197655;197656;197657;197658;197659 197650 9 LHYNEGLNIK Unmodified 1199.6299 0.62987176 1437 P41236;Q6NXS1 PPP1R2;PPP1R2P3 Protein phosphatase inhibitor 2;Protein phosphatase inhibitor 2-like protein 3 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.73 3.91 10 2 10 4 4 4 1 1 2 2 2 2 48.219 45.195 2;3 0.001634 57792 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 85.731 65.969 2578200000 1745700000 161410000 494900000 0 0 0 0 7896500 9872400 0 46956000 38390000 0 33243000 39853000 29581 1437 27036 248669;248670;248671;248672;248673;248674;248675;248676;248677;248678;248679;248680;248681;248682;248683;248684;248685;248686;248687;248688;248689;248690 197660;197661;197662;197663;197664;197665;197666;197667;197668;197669;197670;197671;197672;197673;197674;197675;197676;197677;197678;197679;197680 197676 20 LHYPTGEVPFPR Unmodified 1411.7248 0.72483478 2830 Q5VZ89 DENND4C DENN domain-containing protein 4C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.977 69.056 3 0.0020658 79875 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 45.829 40.13 135000000 0 0 0 5541500 4681800 12934000 6258800 11318000 9544100 10855000 12459000 18464000 13204000 8022800 21714000 29582 2830 27037 248691;248692;248693;248694;248695;248696;248697;248698;248699;248700;248701;248702 197681;197682;197683;197684;197685 197685 4 LHYYETPTGIK Unmodified 1320.6714 0.67140222 5246 Q9Y5R8 TRAPPC1 Trafficking protein particle complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 7 3.87 3 5 2 1 1 1 1 1 1 48.476 46.214 2;3 1.7653E-10 58708 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 152.06 118.1 257930000 215150000 0 23037000 0 0 0 3657600 0 1852800 0 0 4852700 2623400 0 6751100 29583 5246 27038 248703;248704;248705;248706;248707;248708;248709;248710 197686;197687;197688;197689 197689 3 LIAAATSVLK Unmodified 985.61718 0.61718181 1178 P24863 CCNC Cyclin-C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 61.729 61.838 2 0.026136 70837 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 44.377 10.205 51599000 0 0 0 2396800 2967700 0 4023400 3628800 3142700 4477100 5041200 5069800 4934400 4982800 10934000 29584 1178 27039 248711;248712;248713;248714;248715;248716;248717;248718;248719;248720;248721 197690 197690 1 LIAALSTPSQQVQESVASCLPPLVPAIK Unmodified 2916.5994 0.59942984 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS 3 0 1 1 97.435 94.127 3 0.024805 112865 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 18.919 16.637 2507400 0 2507400 0 0 0 0 0 0 0 0 0 0 0 0 0 29585 3641 27040 248722 197691 197691 1 LIAAQTGTR Unmodified 929.52943 0.52942943 4271 Q9BZL1 UBL5 Ubiquitin-like protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.473 19.671 2 0.018576 20267 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 54.712 6.9695 157470000 0 0 0 7630000 7787100 10603000 8147800 6386800 6411600 9265000 20272000 20678000 9892900 13061000 37337000 29586 4271 27041 248723;248724;248725;248726;248727;248728;248729;248730;248731;248732;248733;248734 197692;197693;197694 197693 3 LIADEENK Unmodified 930.46583 0.46582612 5389 yes yes 0 0 0 By matching By MS/MS 2 0 3 1 2 16.067 12.437 2 0.017927 16174 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.55 65.578 + 58175000 1882800 56293000 0 0 0 0 0 0 0 0 0 0 0 0 0 29587 5389 27042 248735;248736;248737 197695 197695 1 LIADVAPSAIR Unmodified 1124.6554 0.65535823 1405 P39748 FEN1 Flap endonuclease 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.094 64.185 2 0.00030791 73387 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 94.692 42.837 360330000 0 0 0 17256000 13294000 40091000 27337000 19041000 12219000 44949000 32179000 46968000 26388000 24753000 55852000 29588 1405 27043 248738;248739;248740;248741;248742;248743;248744;248745;248746;248747;248748;248749 197696;197697;197698;197699;197700;197701;197702;197703;197704;197705;197706;197707 197697 8 LIADVAPSAIRENDIK Unmodified 1723.9468 0.9468488 1405 P39748 FEN1 Flap endonuclease 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 6 4 24 3 5 2 2 2 2 2 2 2 2 2 2 2 2 2 68.206 66.744 2;3 4.3749E-40 87941 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 164.81 133.38 7002000000 499920000 2742400000 1853400000 57366000 66704000 238130000 133200000 101160000 88453000 250310000 195900000 192380000 122480000 144300000 315890000 29589 1405 27044 248750;248751;248752;248753;248754;248755;248756;248757;248758;248759;248760;248761;248762;248763;248764;248765;248766;248767;248768;248769;248770;248771;248772;248773;248774;248775;248776;248777;248778;248779;248780;248781;248782;248783 197708;197709;197710;197711;197712;197713;197714;197715;197716;197717;197718;197719;197720;197721;197722;197723;197724;197725;197726;197727;197728;197729;197730;197731;197732;197733;197734;197735;197736;197737;197738 197722 29 LIAELGQDLSGSITSDLILENIK Unmodified 2441.3265 0.32648568 3465 Q8NI27 THOC2 THO complex subunit 2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 99.249 93.42 2;3 0.0016157 118016 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 38.384 31.284 11530000 11530000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29590 3465 27045 248784;248785 197739;197740 197740 1 LIAEQPPHLTPGIR Unmodified 1540.8726 0.87256165 1972 P78330 PSPH Phosphoserine phosphatase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 62.966 63.235 3 0.00031136 71297 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.482 37.158 132140000 0 0 0 0 0 13049000 0 0 0 10744000 17337000 21125000 7455700 14673000 47753000 29591 1972 27046 248786;248787;248788;248789;248790;248791;248792 197741;197742;197743;197744;197745 197742 5 LIAEQTLQENLIEK Unmodified 1640.8985 0.89850163 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 77.048 76.38 2 1.7146E-49 88277 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 207.29 181.17 627160000 0 415940000 4970600 7451400 14012000 14996000 13073000 15450000 13013000 23096000 27589000 21049000 14217000 15430000 26868000 29592 2804 27047 248793;248794;248795;248796;248797;248798;248799;248800;248801;248802;248803;248804;248805;248806;248807 197746;197747;197748;197749;197750;197751;197752;197753;197754;197755;197756;197757;197758;197759;197760 197747 15 LIAHAGSLLNLAK Unmodified 1319.7925 0.79252041 5125 Q9Y2X3 NOP58 Nucleolar protein 58 yes yes 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 72.019 72.212 3 0.02531 82348 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.068 22.016 17707000 0 0 0 0 0 2114300 0 3843500 0 2143600 1532200 2034500 1106200 0 4932700 29593 5125 27048 248808;248809;248810;248811;248812;248813;248814 197761 197761 1 LIAINANDPEASK Unmodified 1354.7092 0.70924429 4374 Q9H2U2 PPA2 Inorganic pyrophosphatase 2, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.8 3.92 2 3 1 1 1 1 1 55.028 50.586 2 0.00063141 57288 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.197 37.037 576350000 8658000 551820000 0 0 0 0 0 0 0 0 0 0 0 0 15878000 29594 4374 27049 248815;248816;248817;248818;248819 197762;197763;197764;197765;197766;197767 197764 6 LIALAICK Unmodified 900.54666 0.5466594 3465 Q8NI27 THOC2 THO complex subunit 2 yes yes 0 0 0 By MS/MS 2 0 1 1 77.398 69.267 2 0.024349 91283 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.381 63.533 6133700 6133700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29595 3465 27050 248820 197768 197768 1 LIALGEENATLK Unmodified 1270.7133 0.71326704 2623 Q16649 NFIL3 Nuclear factor interleukin-3-regulated protein yes yes 0 0 0 By MS/MS 2 0 1 1 72.017 66.29 2 0.00031756 84102 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.409 72.903 13713000 0 13713000 0 0 0 0 0 0 0 0 0 0 0 0 0 29596 2623 27051 248821 197769 197769 1 LIALLEVLSQK Unmodified 1225.7646 0.76457433 1124;487 P21333;O75369 FLNA;FLNB Filamin-A;Filamin-B no no 0 0 0 By MS/MS 10 0 1 1 95.739 95.893 2 0.00032275 111215 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.247 60.16 2850000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2850000 29597 1124;487 27052 248822 197770;197771 197771 2 LIALLVK Unmodified 768.54731 0.54731133 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.139 75.202 2 0.02563 86559 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 80.377 34.026 68792000 0 0 0 2820500 4610100 6877600 5108400 6954900 4762900 6730300 6133900 6213800 4514800 5056200 9009100 29598 19 27053 248823;248824;248825;248826;248827;248828;248829;248830;248831;248832;248833;248834 197772;197773;197774;197775;197776;197777;197778 197772 7 LIALSIDSVEDHLAWSK Unmodified 1895.9993 0.9992783 1261 P30041 PRDX6 Peroxiredoxin-6 yes yes 0 0 0 By MS/MS By MS/MS 2.38 0.484 5 3 4 4 94.632 89.516 2;3 5.5514E-14 92350 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 124.92 120.4 480910000 374350000 106570000 0 0 0 0 0 0 0 0 0 0 0 0 0 29599 1261 27054 248835;248836;248837;248838;248839;248840;248841;248842 197779;197780;197781;197782;197783;197784;197785 197782 6 LIALTASANK Unmodified 1000.5917 0.59169534 1636 P50748 KNTC1 Kinetochore-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 5.4 3.77 2 1 2 1 2 1 1 50.117 46.414 2 0.008621 52783 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 59.597 20.76 88848000 39853000 42298000 0 0 0 2804600 0 0 0 3893400 0 0 0 0 0 29600 1636 27055 248843;248844;248845;248846;248847 197786;197787;197788;197789 197786 3 LIAMYNDGAEVWDTK Unmodified 1724.808 0.80797206 4266 Q9BZH6 WDR11 WD repeat-containing protein 11 yes yes 0 0 0 By MS/MS 2 0 1 1 83.637 78.917 2 0.0013125 98152 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.393 49.025 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29601 4266 27056 248848 197790 197790 1 LIANNTTVER Unmodified 1129.6091 0.60913632 716 O96019 ACTL6A Actin-like protein 6A yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 28.078 28.188 2 0.0011859 30482 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 108.98 45.498 139600000 0 0 0 9906500 14683000 2084400 14495000 16314000 0 18027000 30548000 0 0 0 33541000 29602 716 27057 248849;248850;248851;248852;248853;248854;248855;248856 197791;197792;197793;197794;197795 197795 1 LIAPVAEEEATVPNNK Unmodified 1693.8887 0.88866522 836 P07195 LDHB L-lactate dehydrogenase B chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.66 3.98 5 17 7 24 10 16 3 2 2 2 2 2 2 2 2 2 2 2 2 67.428 65.68 2;3 1.9838E-91 80140 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 212.12 188.9 49977000000 2096500000 41414000000 637650000 55622000 67798000 102100000 85848000 84594000 52636000 114440000 1109000000 750890000 99715000 644180000 2661800000 29603 836 27058 248857;248858;248859;248860;248861;248862;248863;248864;248865;248866;248867;248868;248869;248870;248871;248872;248873;248874;248875;248876;248877;248878;248879;248880;248881;248882;248883;248884;248885;248886;248887;248888;248889;248890;248891;248892;248893;248894;248895;248896;248897;248898;248899;248900;248901;248902;248903;248904;248905;248906;248907;248908;248909 197796;197797;197798;197799;197800;197801;197802;197803;197804;197805;197806;197807;197808;197809;197810;197811;197812;197813;197814;197815;197816;197817;197818;197819;197820;197821;197822;197823;197824;197825;197826;197827;197828;197829;197830;197831;197832;197833;197834;197835;197836;197837;197838;197839;197840;197841;197842;197843;197844;197845;197846;197847;197848;197849 197804 46 LIAQNLELNETIK Unmodified 1497.8403 0.84025847 1695 P52732 KIF11 Kinesin-like protein KIF11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 75.911 74.641 2 1.321E-22 92974 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 187.42 150.3 894130000 12854000 825700000 6732100 0 3512900 5413800 2235800 3635500 4836700 8423900 4923100 5577400 0 3037500 7240600 29604 1695 27059 248910;248911;248912;248913;248914;248915;248916;248917;248918;248919;248920;248921;248922;248923 197850;197851;197852;197853;197854;197855;197856;197857;197858;197859;197860;197861;197862;197863 197853 14 LIASSLVAGEK Unmodified 1086.6285 0.62847478 2463 Q14C86 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 54.778 54.909 2 0.00055755 60846 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.338 26.788 391030000 0 0 0 21909000 17721000 41535000 27734000 31472000 20850000 49741000 33432000 31174000 33721000 24969000 56768000 29605 2463 27060 248924;248925;248926;248927;248928;248929;248930;248931;248932;248933;248934;248935 197864;197865;197866;197867;197868;197869;197870;197871;197872;197873 197867 10 LIASYCNVGDIEGASK Unmodified 1695.8138 0.81378572 1464 P42704 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 66.071 66.135 2 3.5851E-31 75122 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 146.07 133.49 52145000 0 0 0 3460900 1469100 5483900 1868400 1829500 0 5351400 7698900 13692000 4406500 0 6884600 29606 1464 27061 248936;248937;248938;248939;248940;248941;248942;248943;248944;248945;248946 197874;197875;197876;197877;197878;197879;197880;197881;197882;197883 197877 10 LIAVIGDEDTVTGFLLGGIGELNK Unmodified 2443.321 0.32100637 2639 Q16864 ATP6V1F V-type proton ATPase subunit F yes yes 0 0 0 By MS/MS 2 0 1 1 101.79 93.658 3 0.0012455 120572 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 37.228 25.148 5894900 5894900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29607 2639 27062 248947 197884 197884 1 LIAYGHITGNAPDSGAPGK Unmodified 1837.9323 0.93226137 5276 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 2 1 1 58.188 51.892 2;3 5.6914E-06 70255 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.081 49.918 60139000 51056000 3206100 5877700 0 0 0 0 0 0 0 0 0 0 0 0 29608 5276 27063 248948;248949;248950;248951 197885;197886;197887;197888;197889 197886 4 LIAYGHLTGNAPDSTTPGK Unmodified 1911.969 0.96904081 5277 Q9Y6D6 ARFGEF1 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 63.051 54.783 3 0.045939 73893 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 27.678 20.447 17447000 17447000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29609 5277 27064 248952 197890 197890 0 LICCDILDVLDK Unmodified 1475.7364 0.73638702 1882 P62258 YWHAE 14-3-3 protein epsilon yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 3 1 95.872 91.18 2 9.234E-06 113721 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.42 113.27 493250000 33870000 454990000 4395600 0 0 0 0 0 0 0 0 0 0 0 0 29610 1882 27065 248953;248954;248955;248956;248957 197891;197892;197893;197894;197895 197891 5 LICDVSRQELNK Unmodified 1473.761 0.76096229 1733 P54136 RARS Arginine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 2 2 44.759 39.749 2;3 0.0037185 49384 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 77.062 58.989 150060000 19380000 55752000 74927000 0 0 0 0 0 0 0 0 0 0 0 0 29611 1733 27066 248958;248959;248960;248961;248962 197896;197897;197898;197899;197900 197897 3 LICQHIVPGNVK Unmodified 1376.7598 0.75984008 4641 Q9NU22 MDN1 Midasin yes yes 0 0 0 By MS/MS 2 0 1 1 58.586 50.38 3 0.008358 68565 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.286 51.286 15691000 15691000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29612 4641 27067 248963 197901 197901 1 LICTIQQHHK Unmodified 1276.671 0.67102507 3518 Q8TEQ6 GEMIN5 Gem-associated protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 17.785 17.313 3 0.0022368 27418 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.654 52.724 106250000 80015000 0 0 1826300 0 3204500 0 1608500 0 2594400 0 8925800 4266400 3812100 0 29613 3518 27068 248964;248965;248966;248967;248968;248969;248970;248971 197902;197903;197904 197903 2 LIDDMVAQAMK Unmodified 1233.6097 0.60972994 552 O75874 IDH1 Isocitrate dehydrogenase [NADP] cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 75.957 75.39 2 0.00046398 93093 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.16 94.994 184740000 0 66779000 0 3832400 854780 0 0 1744800 0 0 12545000 12539000 0 11176000 75273000 29614 552 27069 248972;248973;248974;248975;248976;248977;248978;248979 197905;197906;197907;197908;197909;197910 197905 6 LIDDMVAQAMK 2 Oxidation (M) 1265.5996 0.59955919 552 O75874 IDH1 Isocitrate dehydrogenase [NADP] cytoplasmic yes yes 0 2 0 By matching By MS/MS 10 0 2 1 1 36.161 36.76 2 0.00021218 39775 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.149 57.82 14064000 0 0 0 0 0 0 0 0 0 0 4098700 0 0 0 9965800 29615 552 27069 248980;248981 197911 197911 714;715 1 LIDDMVAQAMK Oxidation (M) 1249.6046 0.60464457 552 O75874 IDH1 Isocitrate dehydrogenase [NADP] cytoplasmic yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 2 1 2 3 2 56.214 56.375 2 0.00028154 64188 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 85.67 56.583 57513000 0 0 0 7550400 0 0 0 0 0 0 7161100 4414800 0 11303000 27084000 29616 552 27069 248982;248983;248984;248985;248986;248987;248988;248989;248990;248991 197912;197913;197914;197915;197916;197917;197918;197919;197920 197914 714;715 9 LIDDYGVEEEPAELPEGTSLTVDNK Unmodified 2732.2916 0.29161632 2038 Q00577 PURA Transcriptional activator protein Pur-alpha yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 1 1 6 2 1 1 1 1 1 1 82.203 81.278 3 1.0467E-09 94339 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 31.18 28.494 93681000 0 61990000 0 0 3348000 0 0 0 2807400 0 5631500 6004400 0 6512500 7386800 29617 2038 27070 248992;248993;248994;248995;248996;248997;248998;248999 197921;197922;197923;197924;197925;197926;197927;197928 197923 8 LIDELENSQK Unmodified 1187.6034 0.60338224 3101 Q7Z4S6 KIF21A Kinesin-like protein KIF21A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42.401 41.904 2 0.00054669 47424 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 154.28 87.002 513650000 0 293730000 1789900 17136000 15061000 15988000 15165000 14264000 14540000 24524000 21015000 19981000 18914000 18048000 23499000 29618 3101 27071 249000;249001;249002;249003;249004;249005;249006;249007;249008;249009;249010;249011;249012;249013 197929;197930;197931;197932;197933;197934;197935;197936 197929 8 LIDETQDMLLEMLEDMTTGTESETK Unmodified 2872.2916 0.29155802 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 By MS/MS 2 0 1 1 103.46 95.326 3 3.6968E-08 122504 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.771 66.373 24054000 24054000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29619 2775 27072 249014 197937 197937 1 LIDFGIANQMQPDTTSVVK Oxidation (M) 2092.0511 0.051055878 1331 P33981 TTK Dual specificity protein kinase TTK yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 79.934 79.993 2;3 1.4643E-83 92532 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 173.68 158.65 515110000 0 0 0 17616000 34326000 38271000 40651000 40178000 36884000 64008000 54584000 69189000 38189000 33456000 47760000 29620 1331 27073 249015;249016;249017;249018;249019;249020;249021;249022;249023;249024;249025;249026;249027;249028;249029;249030;249031;249032;249033;249034;249035;249036;249037;249038 197938;197939;197940;197941;197942;197943;197944;197945;197946;197947;197948;197949 197946 1988 11 LIDFGIANQMQPDTTSVVK Unmodified 2076.0561 0.056141255 1331 P33981 TTK Dual specificity protein kinase TTK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 2 18 2 2 2 1 2 1 2 2 1 1 2 2 85.324 84.901 2;3 4.7964E-86 105124 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 173.33 159.07 168310000 0 54708000 0 0 7362400 4197000 2569400 14559000 4775500 14592000 13171000 9367600 4764000 9116300 29124000 29621 1331 27073 249039;249040;249041;249042;249043;249044;249045;249046;249047;249048;249049;249050;249051;249052;249053;249054;249055;249056;249057;249058 197950;197951;197952;197953;197954;197955;197956;197957;197958;197959;197960;197961;197962;197963 197953 14 LIDFGLAR Unmodified 903.5178 0.51780212 2571 Q15746 MYLK Myosin light chain kinase, smooth muscle;Myosin light chain kinase, smooth muscle, deglutamylated form yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.84 75.903 2 0.0044555 87141 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.61 0 436280000 0 0 0 13750000 10806000 24038000 26953000 24002000 22883000 38254000 54903000 49787000 33355000 35456000 102090000 29622 2571 27074 249059;249060;249061;249062;249063;249064;249065;249066;249067;249068;249069;249070 197964 197964 1 LIDFLECGK Unmodified 1093.5478 0.54778161 1062 P17844 DDX5 Probable ATP-dependent RNA helicase DDX5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.135 77.196 2 0.0030604 89078 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 91.853 77.015 132680000 0 0 0 5284200 6665300 9946400 9721900 10560000 6165800 11112000 11431000 13995000 12283000 10758000 24756000 29623 1062 27075 249071;249072;249073;249074;249075;249076;249077;249078;249079;249080;249081;249082 197965;197966;197967;197968;197969;197970;197971;197972;197973;197974;197975 197966 11 LIDFLESGK Unmodified 1020.5492 0.54916182 3670 Q92841 DDX17 Probable ATP-dependent RNA helicase DDX17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.671 75.734 2 0.0083679 87366 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 69.825 38.535 503780000 0 0 0 23077000 32367000 31836000 35263000 34449000 19000000 41287000 45082000 54202000 52456000 61774000 72986000 29624 3670 27076 249083;249084;249085;249086;249087;249088;249089;249090;249091;249092;249093;249094 197976;197977;197978;197979;197980;197981;197982;197983;197984;197985;197986 197976 11 LIDFLQAK Unmodified 946.54877 0.54876789 189 O14578 CIT Citron Rho-interacting kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching 8.86 2.8 1 6 1 1 1 1 1 1 1 77.632 76.426 2 0.01982 88972 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 63.306 30.836 27025000 5880700 0 0 2402600 2885200 0 3055900 0 3888200 4633500 0 0 4279000 0 0 29625 189 27077 249095;249096;249097;249098;249099;249100;249101 197987;197988;197989 197988 3 LIDGIVLTK Unmodified 970.60628 0.60628277 863 P08240 SRPR Signal recognition particle receptor subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 71.264 71.561 2 0.010372 82207 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.42 8.2986 17884000 0 0 0 0 0 0 0 0 0 5562100 0 6194600 0 0 6127800 29626 863 27078 249102;249103;249104 197990 197990 1 LIDIFYPGDQQSVTFGTK Unmodified 2028.0204 0.020407676 1749 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 0 0 0 By MS/MS 2 0 1 1 95.053 90.188 2 0.0054157 111865 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 57.267 43.304 10080000 0 10080000 0 0 0 0 0 0 0 0 0 0 0 0 0 29627 1749 27079 249105 197991 197991 1 LIDIGNSCR Unmodified 1046.5179 0.51787847 116 O00139 KIF2A Kinesin-like protein KIF2A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 42.48 42.461 2 0.048015 47687 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 42.599 7.3034 28472000 0 0 0 4182700 2747700 2809000 2612300 4782700 0 0 0 0 6515500 4822500 0 29628 116 27080 249106;249107;249108;249109;249110;249111;249112 197992;197993 197992 2 LIDIQEK Unmodified 857.48583 0.48583328 2502 Q15154 PCM1 Pericentriolar material 1 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 2 1 1 2 1 1 35.088 35.255 2 0.021589 37558 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 106.42 0 718180000 0 0 0 34499000 35969000 57560000 52815000 47316000 56561000 67347000 0 75256000 101370000 66771000 122720000 29629 2502 27081 249113;249114;249115;249116;249117;249118;249119;249120;249121;249122;249123;249124;249125 197994;197995;197996;197997;197998;197999;198000;198001;198002;198003;198004 197996 10 LIDIVSSQK Unmodified 1001.5757 0.57571092 210 O14757 CHEK1 Serine/threonine-protein kinase Chk1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 2 4 1 1 1 2 1 55.125 50.265 2 0.011755 57321 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 104.44 43.677 119140000 0 117520000 1625900 0 0 0 0 0 0 0 0 0 0 0 0 29630 210 27082 249126;249127;249128;249129;249130;249131 198005;198006;198007;198008;198009 198007 4 LIDLEEDSFLEK Unmodified 1449.7239 0.7238913 2066 Q01968 OCRL Inositol polyphosphate 5-phosphatase OCRL-1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 87.303 80.833 2 3.352E-05 102190 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.23 69.342 61793000 8743900 53049000 0 0 0 0 0 0 0 0 0 0 0 0 0 29631 2066 27083 249132;249133 198010;198011 198010 2 LIDLHSPSEIVK Unmodified 1349.7555 0.7554662 1817 P60866 RPS20 40S ribosomal protein S20 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.611 66.696 3 0.0014795 76378 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 54.005 27.298 196560000 0 0 0 10098000 9937500 7979400 11111000 12812000 8074000 15871000 23651000 33260000 20998000 16986000 25785000 29632 1817 27084 249134;249135;249136;249137;249138;249139;249140;249141;249142;249143;249144;249145 198012;198013;198014;198015;198016;198017;198018;198019;198020;198021 198016 8 LIDNFEGEYDYVTNEGTVFTFK Unmodified 2600.1959 0.19586544 1533 P48147 PREP Prolyl endopeptidase yes yes 0 0 0 By MS/MS 2 0 1 1 96.562 88.432 3 7.4488E-11 114235 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.255 45.213 33471000 33471000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29633 1533 27085 249146 198022 198022 1 LIDPQTQVTR Unmodified 1169.6404 0.64043645 4965 Q9UKG1 APPL1 DCC-interacting protein 13-alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 41.913 42.031 2 0.0091008 46761 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 58.433 36.905 56487000 0 0 0 4047300 2788000 7237100 3678100 0 0 10672000 6792900 0 5313900 5044700 10913000 29634 4965 27086 249147;249148;249149;249150;249151;249152;249153;249154;249155 198023;198024;198025 198023 3 LIDREIISHDTR Unmodified 1466.7841 0.78414057 723 P00387 CYB5R3 NADH-cytochrome b5 reductase 3;NADH-cytochrome b5 reductase 3 membrane-bound form;NADH-cytochrome b5 reductase 3 soluble form yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 39.021 39.214 3 0.00083912 43560 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 58.831 43.8 141800000 0 0 0 10454000 5870700 0 8299600 14517000 9317200 16729000 11997000 23582000 13182000 8286900 19560000 29635 723 27087 249156;249157;249158;249159;249160;249161;249162;249163;249164;249165;249166 198026;198027;198028;198029;198030;198031;198032;198033;198034 198032 4 LIDREIISHDTRR Unmodified 1622.8853 0.8852516 723 P00387 CYB5R3 NADH-cytochrome b5 reductase 3;NADH-cytochrome b5 reductase 3 membrane-bound form;NADH-cytochrome b5 reductase 3 soluble form yes yes 0 0 2 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 2 1 1 2 1 1 2 34.531 34.909 3;4 1.1318E-05 37091 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.089 66.943 375220000 0 0 0 0 0 13423000 8865100 39889000 36907000 0 14600000 82623000 43923000 10594000 124390000 29636 723 27088 249167;249168;249169;249170;249171;249172;249173;249174;249175;249176;249177;249178 198035;198036;198037;198038;198039;198040 198037 6 LIDSWMGK Oxidation (M) 964.4688 0.46880301 1496 P46063 RECQL ATP-dependent DNA helicase Q1 yes yes 0 1 0 By MS/MS By MS/MS 2 0 3 1 2 48.789 44.293 2 0.020153 57859 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.671 54.159 200820000 0 168300000 32523000 0 0 0 0 0 0 0 0 0 0 0 0 29637 1496 27089 249179;249180;249181 198041;198042;198043 198041 2362 3 LIDSWMGK Unmodified 948.47389 0.47388839 1496 P46063 RECQL ATP-dependent DNA helicase Q1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61.877 60.763 2 0.01674 78479 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.626 45.256 429610000 71598000 261510000 23441000 2165100 2249000 3572700 3107300 6434300 2440900 4647100 7966700 9862300 3547900 7335400 19741000 29638 1496 27089 249182;249183;249184;249185;249186;249187;249188;249189;249190;249191;249192;249193;249194;249195;249196 198044;198045;198046;198047;198048;198049 198045 5 LIDVLENR Unmodified 970.54475 0.54474515 4168 Q9BUQ8 DDX23 Probable ATP-dependent RNA helicase DDX23 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.147 61.248 2 0.0066594 69970 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 98.997 60.205 96148000 0 0 0 4759900 6682000 5703400 7042100 8230200 3777400 9584800 8675600 10539000 8625000 7858000 14670000 29639 4168 27090 249197;249198;249199;249200;249201;249202;249203;249204;249205;249206;249207;249208 198050;198051;198052;198053;198054;198055;198056;198057;198058;198059;198060 198056 11 LIDVNHYAK Unmodified 1071.5713 0.57129425 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 43.444 38.217 2 0.0032316 48430 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 136.27 115.75 398470000 290830000 18535000 89107000 0 0 0 0 0 0 0 0 0 0 0 0 29640 2344 27091 249209;249210;249211 198061;198062 198062 0 LIDWLEDAESHLDSELEISNDPDK Unmodified 2782.2821 0.28211426 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS 2 0 1 1 98.565 90.434 3 5.6388E-58 116681 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 133.1 114.54 27414000 27414000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29641 5049 27092 249212 198063 198063 1 LIEALEK Unmodified 814.48002 0.48001963 2072 Q02241 KIF23 Kinesin-like protein KIF23 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 41.975 42.143 2 0.023899 45591 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.262 4.5884 216460000 0 0 0 13079000 14539000 17272000 20557000 15718000 12874000 25600000 26448000 25621000 21504000 0 23245000 29642 2072 27093 249213;249214;249215;249216;249217;249218;249219;249220;249221;249222;249223 198064;198065;198066;198067;198068;198069;198070;198071;198072 198067 9 LIEAVDNMLSNK Oxidation (M) 1361.6861 0.68606601 4357 Q9H223 EHD4 EH domain-containing protein 4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.9 3.81 3 1 6 3 1 1 1 1 1 1 1 53.014 51.099 2 8.7818E-08 65213 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.53 51.146 94936000 0 58016000 2433500 0 3915100 0 3564500 0 5156100 5650200 0 7304600 0 0 8895700 29643 4357 27094 249224;249225;249226;249227;249228;249229;249230;249231;249232;249233 198073;198074;198075;198076;198077;198078;198079;198080;198081 198076 5819 9 LIEDFLAR Unmodified 975.53893 0.53893149 347 O43617 TRAPPC3 Trafficking protein particle complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 2 2 75.866 75.874 2 0.011082 87496 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 77.741 36.239 126200000 0 0 0 6147600 6421300 19467000 0 11068000 8682700 20349000 0 0 26372000 27689000 0 29644 347 27095 249234;249235;249236;249237;249238;249239;249240;249241;249242;249243 198082;198083;198084;198085 198082 4 LIEDGRGCEVIQEIK Unmodified 1757.8982 0.89818405 916 P10155 TROVE2 60 kDa SS-A/Ro ribonucleoprotein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.344 62.441 3 0.0027436 71760 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 43.813 14.485 72455000 0 0 0 4920100 1390800 2601000 2846400 4764100 3089300 7307800 6494300 9758200 5591000 4582000 19110000 29645 916 27096 249244;249245;249246;249247;249248;249249;249250;249251;249252;249253;249254;249255 198086;198087;198088;198089;198090;198091;198092 198090 7 LIEDSTLSK Unmodified 1004.539 0.53899107 5061 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 34.117 32.824 2 0.014237 36881 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 58.596 18.328 147840000 0 117750000 4543200 0 2766700 6870800 0 0 0 8542800 0 0 0 0 7364600 29646 5061 27097 249256;249257;249258;249259;249260;249261 198093;198094;198095 198093 3 LIEEAWSPPAEGEHSLEGEVHYSAEK Unmodified 2893.3406 0.3406322 2465 Q14CX7 NAA25 N-alpha-acetyltransferase 25, NatB auxiliary subunit yes yes 0 0 0 By MS/MS 10 0 1 1 74.054 74.223 3 0.00043361 85262 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 30.024 23.071 8332300 0 0 0 0 0 0 0 0 8332300 0 0 0 0 0 0 29647 2465 27098 249262 198096 198096 1 LIEECISQIVLHK Unmodified 1580.8596 0.8596137 417 O60610 DIAPH1 Protein diaphanous homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 8 3.46 1 3 1 1 1 1 83.275 80.661 3 0.00031001 103398 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 91.858 78.178 36171000 26373000 0 0 0 0 0 0 0 3964200 0 0 0 0 5833600 0 29648 417 27099 249263;249264;249265;249266 198097;198098;198099 198098 3 LIEEENMLAPSLK Oxidation (M) 1501.7698 0.76979564 4881 Q9UGJ1 TUBGCP4 Gamma-tubulin complex component 4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 64.565 64.7 2 0.0030933 74450 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 50.194 28.747 33839000 0 0 0 0 3675600 0 4430600 3467400 3307500 0 6091200 8257400 0 4609100 0 29649 4881 27100 249267;249268;249269;249270;249271;249272;249273 198100;198101;198102;198103;198104 198104 6239 5 LIEEETAR Unmodified 959.49238 0.49237523 4695 Q9NWB6 ARGLU1 Arginine and glutamate-rich protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.02 21.215 2 0.006389 21780 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 101.28 48.648 412250000 0 0 0 24933000 29710000 32866000 37061000 30207000 26320000 35594000 49738000 61062000 46236000 0 38527000 29650 4695 27101 249274;249275;249276;249277;249278;249279;249280;249281;249282;249283;249284;249285 198105;198106;198107;198108;198109;198110;198111;198112;198113;198114 198106 10 LIEELAIAK Unmodified 998.6012 0.60119739 3582 Q8WXA3 RUFY2 RUN and FYVE domain-containing protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 73.82 68.665 2 0.040903 86329 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.191 16.433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29651 3582 27102 249286 198115 198115 1 LIEESCPQLANSVQIR Unmodified 1855.9462 0.94619688 4945 Q9UJX4 ANAPC5 Anaphase-promoting complex subunit 5 yes yes 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 71.756 72.052 2 0.0011827 82924 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 69.451 51.642 7958500 0 0 0 0 0 0 0 0 0 0 0 3448800 0 1796400 2713200 29652 4945 27103 249287;249288;249289 198116 198116 1 LIEEVMIGEDK Oxidation (M) 1290.6377 0.63771883 1980 P78371 CCT2 T-complex protein 1 subunit beta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.5 3.88 7 2 11 3 4 2 1 1 1 1 1 1 1 1 1 1 1 58.962 57.385 2 0.00022354 64930 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.681 26.681 2419600000 200190000 1387000000 38791000 0 50793000 100260000 58517000 33293000 44116000 96684000 84751000 83166000 65571000 59609000 116910000 29653 1980 27104 249290;249291;249292;249293;249294;249295;249296;249297;249298;249299;249300;249301;249302;249303;249304;249305;249306;249307;249308;249309 198117;198118;198119;198120;198121;198122;198123;198124;198125;198126;198127;198128;198129;198130;198131;198132;198133;198134;198135;198136;198137;198138;198139;198140;198141;198142;198143;198144 198128 3195 28 LIEEVMIGEDK Unmodified 1274.6428 0.64280421 1980 P78371 CCT2 T-complex protein 1 subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.62 3.92 1 6 2 12 4 4 1 1 1 1 1 1 1 1 1 1 1 1 1 72.076 70.223 2 1.2077E-20 77976 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 166.34 125.35 3943000000 317540000 2883600000 25396000 18009000 25215000 70093000 38628000 42013000 39320000 77608000 77346000 69711000 47035000 63011000 148490000 29654 1980 27104 249310;249311;249312;249313;249314;249315;249316;249317;249318;249319;249320;249321;249322;249323;249324;249325;249326;249327;249328;249329;249330 198145;198146;198147;198148;198149;198150;198151;198152;198153;198154;198155;198156;198157;198158;198159;198160;198161;198162;198163;198164;198165;198166;198167;198168 198166 24 LIEFLSK Unmodified 848.50076 0.50075507 5140 Q9Y376 CAB39 Calcium-binding protein 39 yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 75.326 70.814 2 0.042813 88618 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.451 25.741 58114000 565060 57549000 0 0 0 0 0 0 0 0 0 0 0 0 0 29655 5140 27105 249331;249332 198169 198169 1 LIEFSPLR Unmodified 973.55967 0.55966693 2052 Q01415 GALK2 N-acetylgalactosamine kinase yes yes 0 0 0 By MS/MS 10 0 1 1 75.719 76.031 2 0.020609 87201 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.659 30.531 9194600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9194600 29656 2052 27106 249333 198170 198170 1 LIEFSPLRATDVK Unmodified 1487.8348 0.83477916 2052 Q01415 GALK2 N-acetylgalactosamine kinase yes yes 0 0 1 By MS/MS 2 0 1 1 82.947 74.816 3 0.044815 97875 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 32.567 13.368 28427000 28427000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29657 2052 27107 249334 198171 198171 1 LIEGLSHEVIVSAACGR Unmodified 1809.9407 0.94071757 4806 Q9P258 RCC2 Protein RCC2 yes yes 0 0 0 By MS/MS 10 0 1 1 74.005 74.344 3 3.3481E-29 85183 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.347 70.026 12476000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12476000 29658 4806 27108 249335 198172 198172 1 LIEIENFK Unmodified 1004.5542 0.5542472 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 70.802 69.532 2 0.0067278 79559 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 98.418 20.677 724970000 50521000 347440000 26126000 12809000 13408000 29204000 20297000 16643000 0 28456000 38270000 42339000 24564000 24601000 50283000 29659 2431 27109 249336;249337;249338;249339;249340;249341;249342;249343;249344;249345;249346;249347;249348;249349;249350 198173;198174;198175;198176;198177;198178;198179;198180;198181;198182;198183;198184;198185;198186;198187 198181 13 LIEILSEK Unmodified 943.559 0.55899823 4817 Q9P2E9 RRBP1 Ribosome-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 66.04 65.883 2 0.030702 74523 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 55.37 12.456 4043400 0 0 0 0 1072400 0 0 0 0 0 0 0 0 2971100 0 29660 4817 27110 249351;249352;249353 198188;198189 198189 2 LIEKQISQMADDTVAELDR Unmodified 2174.0889 0.088897947 3804 Q96E11 MRRF Ribosome-recycling factor, mitochondrial yes yes 0 0 1 By MS/MS 10 0 1 1 64.532 64.863 3 0.046994 74123 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 22.435 12.647 11920000 0 0 0 0 0 0 0 0 0 0 11920000 0 0 0 0 29661 3804 27111 249354 198190 198190 1 LIELDDSQK Unmodified 1059.5448 0.54480473 2830 Q5VZ89 DENND4C DENN domain-containing protein 4C yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 42.136 42.071 2 0.015207 46970 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 57.59 19.429 24690000 0 0 0 5335200 0 6337300 5913400 0 0 7104200 0 0 0 0 0 29662 2830 27112 249355;249356;249357;249358;249359;249360 198191;198192;198193 198191 3 LIELDESFK Unmodified 1092.5703 0.5702912 3089 Q7Z401 DENND4A C-myc promoter-binding protein yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 71.852 71.876 2 0.018109 82750 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 55.112 12.243 9503500 0 0 0 0 1777100 0 0 0 0 1980800 3307300 0 0 2438400 0 29663 3089 27113 249361;249362;249363;249364;249365 198194;198195;198196 198196 3 LIELLAGK Unmodified 855.54295 0.54295423 4689 Q9NW08 POLR3B DNA-directed RNA polymerase III subunit RPC2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 71.752 70.529 2 0.013016 89893 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.418 29.933 150450000 55997000 30423000 0 2920800 3865300 6124300 5064100 5403300 3441600 7118700 5197600 5996300 4804700 5202400 8891400 29664 4689 27114 249366;249367;249368;249369;249370;249371;249372;249373;249374;249375;249376;249377;249378;249379;249380;249381 198197;198198;198199;198200;198201;198202;198203 198197 7 LIELQAGKK Unmodified 998.61243 0.61243078 996 P14314 PRKCSH Glucosidase 2 subunit beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 37.014 32.166 2 0.0099741 40286 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 126.67 35.626 210050000 167930000 23314000 18812000 0 0 0 0 0 0 0 0 0 0 0 0 29665 996 27115 249382;249383;249384;249385 198204;198205;198206 198206 1 LIENPLLR Unmodified 966.58622 0.58621603 3427 Q8NEM2 SHCBP1 SHC SH2 domain-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.431 70.508 2 0.0092881 80887 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 83.377 20.229 87148000 0 0 0 3945300 4610000 8090800 8551400 5559000 5166500 8482500 8483400 11137000 7603100 6127100 9392200 29666 3427 27116 249386;249387;249388;249389;249390;249391;249392;249393;249394;249395;249396;249397 198207;198208;198209;198210;198211;198212;198213;198214;198215 198208 9 LIENVDPEK Unmodified 1055.5499 0.5498901 4059 Q99747 NAPG Gamma-soluble NSF attachment protein yes yes 0 0 0 By MS/MS 2 0 1 1 41.274 36.179 2 0.02624 47072 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.812 52.848 31365000 0 31365000 0 0 0 0 0 0 0 0 0 0 0 0 0 29667 4059 27117 249398 198216 198216 1 LIEPFFNK Unmodified 1006.5488 0.54876789 662 O95453 PARN Poly(A)-specific ribonuclease PARN yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 80.574 75.419 2 0.016259 94819 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.467 55.373 463740000 303040000 95911000 64783000 0 0 0 0 0 0 0 0 0 0 0 0 29668 662 27118 249399;249400;249401 198217;198218 198217 2 LIEPIPDSHIR Unmodified 1288.7139 0.71393574 273 O15344 MID1 E3 ubiquitin-protein ligase Midline-1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 57.279 57.442 3 0.0086087 65199 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 34.501 6.2181 27928000 0 0 0 0 0 0 0 13034000 0 14894000 0 0 0 0 0 29669 273 27119 249402;249403 198219;198220 198219 2 LIEPLDYENVIVQK Unmodified 1671.9083 0.90833803 4258 Q9BZ29 DOCK9 Dedicator of cytokinesis protein 9 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 84.784 84.879 2 0.00036274 98527 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 90.685 60.942 23178000 0 0 0 0 2939000 0 2377200 0 0 3473100 2839900 3976300 0 2775000 4797400 29670 4258 27120 249404;249405;249406;249407;249408;249409;249410 198221;198222;198223;198224;198225;198226 198225 5 LIEQAPIQMGEEAVR Oxidation (M) 1698.8611 0.86107026 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 59.529 59.627 2 2.7048E-05 67861 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.655 40.13 52145000 0 0 0 4907700 4101200 3508700 3952900 0 0 5718000 4637800 8491800 6099700 6164100 4563100 29671 2804 27121 249411;249412;249413;249414;249415;249416;249417;249418;249419;249420 198227;198228;198229;198230;198231;198232;198233;198234;198235;198236 198234 4432 10 LIEQAPIQMGEEAVR Unmodified 1682.8662 0.86615564 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.541 74.604 2 3.8186E-07 85982 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 111.63 102.37 105910000 0 0 0 4344400 4754000 7090800 5575900 12446000 6241000 9207700 9494200 12111000 7833900 9461700 17347000 29672 2804 27121 249421;249422;249423;249424;249425;249426;249427;249428;249429;249430;249431;249432 198237;198238;198239;198240;198241;198242;198243;198244;198245;198246;198247;198248 198238 9 LIEQIHPSK Unmodified 1063.6026 0.60259438 5051 Q9UPN7 PPP6R1 Serine/threonine-protein phosphatase 6 regulatory subunit 1 yes yes 0 0 0 By MS/MS 10 0 1 1 28.773 29.112 2 0.026363 31494 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 49.85 16.412 7808200 0 0 0 0 0 0 0 0 0 0 0 0 7808200 0 0 29673 5051 27122 249433 198249 198249 1 LIEQYALREEHIDK Unmodified 1755.9155 0.91554867 4652 Q9NUQ3 TXLNG Gamma-taxilin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.71 3.15 1 6 1 1 1 2 2 61.451 62.481 3;4 0.0007912 95576 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 57.136 32.577 87315000 10242000 0 0 0 0 12069000 0 0 8356700 0 0 0 0 10368000 46280000 29674 4652 27123 249434;249435;249436;249437;249438;249439;249440 198250;198251;198252 198252 2 LIEQYELREEHIDK Unmodified 1813.921 0.92102798 1409 P40222 TXLNA Alpha-taxilin yes yes 0 0 1 By MS/MS By MS/MS 2 0 4 2 2 57.993 51.934 3;4 0.0080452 70626 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.216 26.078 104770000 94268000 0 10506000 0 0 0 0 0 0 0 0 0 0 0 0 29675 1409 27124 249441;249442;249443;249444 198253;198254;198255;198256;198257 198254 5 LIERDPYEHPER Unmodified 1552.7634 0.76340513 4386 Q9H3S7 PTPN23 Tyrosine-protein phosphatase non-receptor type 23 yes yes 0 0 1 By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 27.81 28.125 3 0.0069791 30002 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 39.509 30.227 60200000 0 0 0 0 0 6793100 4819700 0 5531400 5330400 6006400 8583000 8902600 4596800 9636300 29676 4386 27125 249445;249446;249447;249448;249449;249450;249451;249452;249453 198258;198259 198259 2 LIERFSPSQQEK Unmodified 1460.7623 0.7623425 2463 Q14C86 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 0 0 1 By MS/MS 2 0 2 2 44.964 38.099 2;3 1.9065E-13 52196 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 139.31 76.231 245310000 245310000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29677 2463 27126 249454;249455 198260;198261;198262 198260 2 LIESAEELIR Unmodified 1171.6449 0.64485312 2254 Q13217 DNAJC3 DnaJ homolog subfamily C member 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.799 71.868 2 0.016128 81947 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.715 16.165 48160000 0 0 0 2674300 2769700 3695400 3989400 3597900 2323500 5079200 3985800 3659700 5227700 3871800 7285500 29678 2254 27127 249456;249457;249458;249459;249460;249461;249462;249463;249464;249465;249466;249467 198263;198264;198265;198266 198265 4 LIESAEELIRDGR Unmodified 1499.7944 0.79437091 2254 Q13217 DNAJC3 DnaJ homolog subfamily C member 3 yes yes 0 0 1 By matching By MS/MS By MS/MS 10 0 3 1 1 1 64.795 65.011 3 0.029562 74317 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 42.041 28.362 9710300 0 0 0 0 0 0 0 0 2717400 0 3530800 0 3462100 0 0 29679 2254 27128 249468;249469;249470 198267 198267 0 LIESAEELIRDGRYTDATSK Unmodified 2266.1441 0.14410464 2254 Q13217 DNAJC3 DnaJ homolog subfamily C member 3 yes yes 0 0 2 By MS/MS 2 0 2 2 79.048 70.918 3;4 8.3326E-12 93204 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.01 83.467 26822000 26822000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29680 2254 27129 249471;249472 198268;198269 198268 2 LIESLFTIQK Unmodified 1190.6911 0.69107503 2189 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 0 0 0 By MS/MS 10 0 1 1 76.77 76.855 2 0.028085 89125 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 43.769 4.1231 2678500 0 0 0 0 0 0 0 0 0 0 0 0 2678500 0 0 29681 2189 27130 249473 198270 198270 1 LIESLTVSK Unmodified 988.58046 0.58046195 5390 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 2 2 61.544 61.855 2 0.012853 69761 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.682 23.588 + 26707000 0 0 0 0 0 0 0 2631500 0 4404200 0 0 0 6716800 12955000 29682 5390 27131 249474;249475;249476;249477;249478;249479 198271;198272 198271 2 LIESSLGSIATK Unmodified 1217.6867 0.68671794 156 O00443 PIK3C2A Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 62.115 62.062 2 0.016799 71093 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 42.336 34.118 14015000 0 0 0 0 4871100 0 0 6049300 0 0 0 0 3094800 0 0 29683 156 27132 249480;249481;249482 198273;198274;198275 198274 3 LIESSLGSVATK Unmodified 1203.6711 0.67106787 178 O00750 PIK3C2B Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 2 1 1 1 1 1 1 1 52.426 52.572 2 0.0098798 59211 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 57.348 12.267 87973000 0 0 0 3106900 3576700 7874100 5993600 10225000 3503400 9601000 7303600 7930100 7008500 7966300 13884000 29684 178 27133 249483;249484;249485;249486;249487;249488;249489;249490;249491;249492;249493;249494;249495 198276;198277;198278;198279;198280;198281;198282 198279 7 LIETQMER Unmodified 1018.5117 0.51173046 470 O75175 CNOT3 CCR4-NOT transcription complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.172 32.359 2 0.0044102 35268 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 112.17 48.692 250450000 0 0 0 11920000 14386000 16740000 16062000 24476000 10746000 19844000 28809000 36276000 20709000 19603000 30880000 29685 470 27134 249496;249497;249498;249499;249500;249501;249502;249503;249504;249505;249506;249507 198283;198284;198285;198286;198287;198288;198289;198290;198291;198292 198287 10 LIETQMER Oxidation (M) 1034.5066 0.50664508 470 O75175 CNOT3 CCR4-NOT transcription complex subunit 3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 17.07 17.273 2 0.031415 16739 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 47.743 11.558 51350000 0 0 0 0 4624700 5157800 5761900 4198500 5408600 3980300 4942200 7556600 0 4740100 4978800 29686 470 27134 249508;249509;249510;249511;249512;249513;249514;249515;249516;249517 198293;198294;198295;198296;198297;198298 198297 592 6 LIETQMERFK Oxidation (M) 1309.67 0.67002202 470 O75175 CNOT3 CCR4-NOT transcription complex subunit 3 yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 37.892 32.888 3 0.0097353 45768 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.073 30.468 24221000 19639000 0 4581000 0 0 0 0 0 0 0 0 0 0 0 0 29687 470 27135 249518;249519 198299 198299 592 1 LIETQMERFK Unmodified 1293.6751 0.67510739 470 O75175 CNOT3 CCR4-NOT transcription complex subunit 3 yes yes 0 0 1 By MS/MS By matching 2 0 2 1 1 57.317 51.255 3 0.00018055 69928 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 118.03 90.606 47455000 46135000 0 1319800 0 0 0 0 0 0 0 0 0 0 0 0 29688 470 27135 249520;249521 198300 198300 1 LIETTANMNSSYVK Oxidation (M) 1585.7658 0.76577289 1498 P46100 ATRX Transcriptional regulator ATRX yes yes 0 1 0 By MS/MS By MS/MS 6 4 1 1 1 1 44.419 39.2 2 1.7689E-18 50830 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.1 106.04 34373000 0 34373000 0 0 0 0 0 0 0 0 0 0 0 0 0 29689 1498 27136 249522;249523 198301;198302;198303 198301 2367 3 LIETTANMNSSYVK Unmodified 1569.7709 0.77085827 1498 P46100 ATRX Transcriptional regulator ATRX yes yes 0 0 0 By MS/MS 2 0 1 1 58.117 52.286 2 3.2608E-14 67290 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 135.66 123.6 84947000 0 84947000 0 0 0 0 0 0 0 0 0 0 0 0 0 29690 1498 27136 249524 198304 198304 1 LIEVANLACSISNNEEGVK Unmodified 2059.0256 0.025569409 1340 P35221 CTNNA1 Catenin alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 7.29 3.67 4 2 11 4 2 1 1 1 1 1 1 1 1 1 1 1 83.891 82.699 2;3 1.2391E-94 102591 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 255.85 232.62 509610000 0 443810000 6097500 1234800 2241100 4448600 1968600 2216200 4059700 9942100 6665200 13428000 0 4235400 9265100 29691 1340 27137 249525;249526;249527;249528;249529;249530;249531;249532;249533;249534;249535;249536;249537;249538;249539;249540;249541 198305;198306;198307;198308;198309;198310;198311;198312;198313;198314 198307 7 LIEVDDER Unmodified 987.48729 0.48728985 1909 P62753 RPS6 40S ribosomal protein S6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.288 34.471 2 0.0087714 38105 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 85.064 54.452 210460000 0 0 0 8439600 13881000 15925000 16061000 13943000 12240000 22245000 22870000 28487000 18912000 15481000 21974000 29692 1909 27138 249542;249543;249544;249545;249546;249547;249548;249549;249550;249551;249552;249553 198315;198316;198317;198318;198319;198320;198321;198322;198323 198323 9 LIEVDDERK Unmodified 1115.5823 0.58225287 1909 P62753 RPS6 40S ribosomal protein S6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 25.793 25.166 2 3.289E-07 33405 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 160.11 105.56 1355400000 0 211850000 18950000 50720000 85445000 74279000 81888000 57948000 69161000 106210000 95531000 110090000 144880000 118390000 130030000 29693 1909 27139 249554;249555;249556;249557;249558;249559;249560;249561;249562;249563;249564;249565;249566;249567;249568 198324;198325;198326;198327;198328;198329;198330;198331;198332;198333;198334;198335;198336;198337;198338 198327 10 LIEVNGVDLVGK Unmodified 1254.7184 0.71835242 3521 Q8TEW0 PARD3 Partitioning defective 3 homolog yes yes 0 0 0 By MS/MS 10 0 1 1 77.151 77.309 2 0.026097 89137 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 52.79 31.888 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29694 3521 27140 249569 198339 198339 1 LIEVQSNSLHK Unmodified 1266.6932 0.6932003 3070 Q7Z2K6 ERMP1 Endoplasmic reticulum metallopeptidase 1 yes yes 0 0 0 By MS/MS 2 0 1 1 43.072 36.278 3 0.0029822 50025 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.663 50.086 18517000 18517000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29695 3070 27141 249570 198340 198340 1 LIEYYLTK Unmodified 1041.5746 0.57464829 3463 Q8NI08 NCOA7 Nuclear receptor coactivator 7 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 70.377 64.418 2 0.021057 85683 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.064 46.826 30004000 25088000 0 4916300 0 0 0 0 0 0 0 0 0 0 0 0 29696 3463 27142 249571;249572 198341 198341 1 LIEYYQQLAQK Unmodified 1395.7398 0.73981614 4942 Q9UJW0 DCTN4 Dynactin subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 71.491 65.942 2 3.0233E-09 84306 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 141.39 103.3 36786000 7024900 28804000 957450 0 0 0 0 0 0 0 0 0 0 0 0 29697 4942 27143 249573;249574;249575;249576 198342;198343;198344;198345 198342 4 LIFLQNVIK Unmodified 1086.6801 0.68011642 4982 Q9UL03 INTS6 Integrator complex subunit 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 86.506 86.659 2 0.024472 100193 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.632 42.213 9071100 0 0 0 0 0 0 0 0 1395500 2095100 0 0 0 0 5580500 29698 4982 27144 249577;249578;249579 198346 198346 1 LIFPERIDPNPADSQK Unmodified 1838.9527 0.95266246 529 O75663 TIPRL TIP41-like protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 75.351 73.803 2;3 3.6251E-24 94712 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.247 77.651 444320000 180330000 59746000 35084000 5766600 5395600 27478000 9244500 7721500 6800800 21324000 18813000 17289000 8990500 15094000 25238000 29699 529 27145 249580;249581;249582;249583;249584;249585;249586;249587;249588;249589;249590;249591;249592;249593;249594;249595;249596 198347;198348;198349;198350;198351;198352;198353;198354;198355;198356;198357;198358;198359;198360;198361;198362;198363;198364 198354 17 LIFPYVELDLHSYDLGIENRDATNDQVTK Unmodified 3377.678 0.67795075 552 O75874 IDH1 Isocitrate dehydrogenase [NADP] cytoplasmic yes yes 0 0 1 By MS/MS 2 0 1 1 97.902 89.772 4 2.0149E-56 115830 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 117.08 107.2 78610000 78610000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29700 552 27146 249597 198365 198365 1 LIFQEGKPVTEK Unmodified 1387.7711 0.77111627 1638 P50851 LRBA Lipopolysaccharide-responsive and beige-like anchor protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 2 1 1 1 1 1 49.006 47.575 3 0.00034332 52927 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 71.085 61.647 470950000 130750000 68970000 30189000 17960000 13040000 29819000 0 26356000 11221000 38109000 33083000 32417000 21776000 17255000 0 29701 1638 27147 249598;249599;249600;249601;249602;249603;249604;249605;249606;249607;249608;249609;249610;249611;249612;249613 198366;198367;198368;198369;198370;198371;198372;198373;198374;198375;198376;198377;198378;198379;198380;198381 198373 15 LIFQMPQNK Oxidation (M) 1133.5903 0.59031513 1518;3166;2321 P46940;Q86VI3;Q13576 IQGAP1;IQGAP3;IQGAP2 Ras GTPase-activating-like protein IQGAP1;Ras GTPase-activating-like protein IQGAP3;Ras GTPase-activating-like protein IQGAP2 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 48.639 48.342 2 0.00074016 53879 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 143.02 101.79 1674200000 0 112870000 0 131460000 97512000 199340000 116370000 80778000 97778000 176390000 146110000 110390000 182810000 106710000 115680000 29702 1518;3166;2321 27148 249614;249615;249616;249617;249618;249619;249620;249621;249622;249623;249624;249625;249626 198382;198383;198384;198385;198386;198387;198388;198389;198390;198391;198392;198393;198394;198395;198396;198397;198398;198399;198400;198401 198397 2403 20 LIFQMPQNK Unmodified 1117.5954 0.59540051 1518;3166;2321 P46940;Q86VI3;Q13576 IQGAP1;IQGAP3;IQGAP2 Ras GTPase-activating-like protein IQGAP1;Ras GTPase-activating-like protein IQGAP3;Ras GTPase-activating-like protein IQGAP2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 71.751 70.59 2 1.5908E-05 80843 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 153.15 135.76 2003600000 347340000 172800000 11486000 110120000 84794000 163090000 103190000 88441000 102350000 127770000 134130000 130690000 93401000 96783000 237240000 29703 1518;3166;2321 27148 249627;249628;249629;249630;249631;249632;249633;249634;249635;249636;249637;249638;249639;249640;249641;249642 198402;198403;198404;198405;198406;198407;198408;198409;198410;198411;198412;198413;198414;198415;198416;198417 198402 16 LIFQYVEEK Unmodified 1167.6176 0.61757574 3453 Q8NG31 CASC5 Protein CASC5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 74.662 73.774 2 0.010773 85067 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.26 44.111 67817000 11552000 0 7946000 0 2525300 6452400 3133500 0 5436800 0 6048200 6080200 4478600 4906300 9257200 29704 3453 27149 249643;249644;249645;249646;249647;249648;249649;249650;249651;249652;249653;249654 198418;198419;198420;198421;198422;198423;198424;198425;198426;198427;198428 198428 11 LIFYDLR Unmodified 938.52255 0.52255314 2485 Q15046 KARS Lysine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.813 78.871 2 0.028147 90561 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.847 37.304 114980000 0 0 0 3379200 2868800 7633400 3987400 4869800 4485900 7124000 9214700 12135000 4721400 12950000 41610000 29705 2485 27150 249655;249656;249657;249658;249659;249660;249661;249662;249663;249664;249665;249666 198429 198429 1 LIGEELAQLK Unmodified 1112.6441 0.64412484 1735 P54252 ATXN3 Ataxin-3 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 79.045 74.309 2 0.00041154 89692 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 128.69 66.687 91341000 0 91341000 0 0 0 0 0 0 0 0 0 0 0 0 0 29706 1735 27151 249667;249668 198430;198431 198431 1 LIGEYGLR Unmodified 919.51272 0.51271674 1511 P46781 RPS9 40S ribosomal protein S9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 53.546 53.662 2 0.0044499 60057 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 110.63 66.102 3302900000 0 0 0 211610000 292380000 206320000 241190000 249660000 198190000 338550000 0 440500000 404080000 315690000 404710000 29707 1511 27152 249669;249670;249671;249672;249673;249674;249675;249676;249677;249678;249679 198432;198433;198434;198435;198436;198437;198438;198439;198440;198441;198442;198443;198444 198442 13 LIGFMRPENGNPQQMQQELQR 2 Oxidation (M) 2545.2166 0.21657485 533 O75694 NUP155 Nuclear pore complex protein Nup155 yes yes 0 2 1 By MS/MS By MS/MS By MS/MS 10 0 4 2 1 1 57.033 57.157 3 6.0252E-05 64954 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 49.34 42.983 20331000 0 0 0 0 0 10815000 0 0 3926200 5589900 0 0 0 0 0 29708 533 27153 249680;249681;249682;249683 198445;198446;198447 198445 698;699 3 LIGIDDVPDAR Unmodified 1182.6245 0.62445203 2021 P98082 DAB2 Disabled homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.392 69.466 2 0.00026483 79876 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 107.15 87.667 186750000 0 0 0 9115400 7694300 13300000 11705000 7409100 9990100 18719000 19517000 18851000 14992000 19851000 35605000 29709 2021 27154 249684;249685;249686;249687;249688;249689;249690;249691;249692;249693;249694;249695 198448;198449;198450;198451;198452;198453;198454;198455;198456;198457;198458 198449 11 LIGIDDVPDARGDK Unmodified 1482.7678 0.7678218 2021 P98082 DAB2 Disabled homolog 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.41 3.11 4 2 23 2 3 1 1 2 2 2 2 2 2 2 2 2 2 2 61.837 61 2;3 0.00097477 68863 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.32 41.787 1388700000 83915000 236830000 23458000 4437700 38769000 65321000 66110000 72765000 60894000 106500000 106970000 96241000 73195000 101600000 251660000 29710 2021 27155 249696;249697;249698;249699;249700;249701;249702;249703;249704;249705;249706;249707;249708;249709;249710;249711;249712;249713;249714;249715;249716;249717;249718;249719;249720;249721;249722;249723;249724 198459;198460;198461;198462;198463;198464;198465;198466;198467;198468;198469;198470;198471;198472;198473;198474;198475;198476;198477;198478;198479;198480;198481;198482;198483;198484;198485;198486;198487 198466 15 LIGISQR Unmodified 785.47594 0.4759373 541 O75794 CDC123 Cell division cycle protein 123 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.522 37.703 2 0.038679 40374 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 69.383 19.264 220700000 0 0 0 8073900 8345800 15665000 13378000 11211000 7584700 17899000 24678000 30653000 17301000 16613000 49301000 29711 541 27156 249725;249726;249727;249728;249729;249730;249731;249732;249733;249734;249735;249736 198488;198489;198490 198490 3 LIGMNCTLMK Unmodified 1179.5814 0.5814067 1301 P31350 RRM2 Ribonucleoside-diphosphate reductase subunit M2 yes yes 0 0 0 By MS/MS 2 0 1 1 76.69 68.559 2 0.010993 90359 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.676 34.71 10697000 10697000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29712 1301 27157 249737 198491;198492 198491 2 LIGNLSEK Unmodified 872.49673 0.49673232 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.149 35.331 2 0.015851 39497 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 68.214 9.9683 363130000 0 0 0 18229000 20091000 31324000 31232000 29592000 22613000 34614000 38242000 39092000 36313000 27585000 34205000 29713 2361 27158 249738;249739;249740;249741;249742;249743;249744;249745;249746;249747;249748;249749 198493;198494;198495;198496;198497;198498;198499;198500 198499 4 LIGNMALLPIR Oxidation (M) 1225.7217 0.72166366 258 O15145 ARPC3 Actin-related protein 2/3 complex subunit 3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.934 80.023 2 2.8941E-05 92083 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 116.25 85.021 113200000 0 0 0 6791300 0 9587900 6505600 6405100 6270500 9105600 12530000 16280000 6072100 6897800 26758000 29714 258 27159 249750;249751;249752;249753;249754;249755;249756;249757;249758;249759;249760 198501;198502;198503;198504;198505;198506;198507;198508;198509;198510;198511 198504 345 11 LIGNMALLPIR Unmodified 1209.7267 0.72674903 258 O15145 ARPC3 Actin-related protein 2/3 complex subunit 3 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 87.708 87.834 2 4.0427E-05 101558 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 116.73 103.15 7826100 0 0 0 0 0 0 0 0 0 0 0 0 0 1064500 6761600 29715 258 27159 249761;249762 198512 198512 1 LIGQLNLK Unmodified 897.56475 0.56475231 3701;164 O00507;Q93008 USP9Y;USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-Y;Probable ubiquitin carboxyl-terminal hydrolase FAF-X no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61.983 60.871 2 0.015256 82454 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 132.72 74.55 594720000 168090000 144540000 20658000 12106000 13112000 22541000 15333000 16587000 11922000 27521000 29074000 34547000 20283000 22413000 35998000 29716 164;3701 27160 249763;249764;249765;249766;249767;249768;249769;249770;249771;249772;249773;249774;249775;249776;249777 198513;198514;198515;198516;198517;198518;198519;198520;198521;198522;198523 198519 6 LIGRYDEEVVK Unmodified 1319.7085 0.70851601 391 O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.341 45.511 3 0.0079978 51027 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 37.327 15.696 184310000 0 0 0 6496300 3935900 13431000 9245800 22715000 7076400 14474000 20194000 19510000 13429000 12779000 41024000 29717 391 27161 249778;249779;249780;249781;249782;249783;249784;249785;249786;249787;249788;249789 198524;198525;198526;198527;198528;198529 198524 6 LIGRYFDEISQDTGK Unmodified 1740.8683 0.86826413 1902 P62495 ETF1 Eukaryotic peptide chain release factor subunit 1 yes yes 0 0 1 By MS/MS By MS/MS 2.67 0.471 1 2 2 1 77.227 72.031 2;3 1.01E-05 93147 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 106.55 79.214 35873000 33515000 2357600 0 0 0 0 0 0 0 0 0 0 0 0 0 29718 1902 27162 249790;249791;249792 198530;198531;198532 198532 3 LIGSHTISK Unmodified 954.54983 0.54983053 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 20.804 20.059 2 0.018714 28117 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.318 27.959 144700000 102590000 13604000 0 2182100 0 3248600 2719600 0 0 4097800 3391000 4364200 0 3266200 5232700 29719 2775 27163 249793;249794;249795;249796;249797;249798;249799;249800;249801;249802 198533;198534 198533 2 LIGSPSLSGLNAK Unmodified 1255.7136 0.71360139 5363 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 5 2 2 1 79.371 73.687 2 0.0019582 93120 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.639 21.566 + 530490000 122960000 380840000 26689000 0 0 0 0 0 0 0 0 0 0 0 0 29720 5363 27164 249803;249804;249805;249806;249807 198535;198536;198537;198538 198535 2 LIGTNCIIYPVNSK Unmodified 1590.844 0.84396364 4287 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O yes yes 0 0 0 By MS/MS 2 0 1 1 79.543 74.808 2 0.022414 93291 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 54.267 44.036 30165000 0 30165000 0 0 0 0 0 0 0 0 0 0 0 0 0 29721 4287 27165 249808 198539 198539 0 LIGVPADAEALSER Unmodified 1439.762 0.76200815 3806 Q96EA4 SPDL1 Protein Spindly yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.359 74.422 2 0.00084174 85665 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 81.017 57.588 118340000 0 0 0 5700100 8052300 5443800 7713800 11984000 7769900 11742000 12172000 14133000 9231100 8224400 16169000 29722 3806 27166 249809;249810;249811;249812;249813;249814;249815;249816;249817;249818;249819;249820 198540;198541;198542;198543;198544;198545;198546;198547;198548;198549;198550 198542 11 LIGVPADAEALSERSGNTPNSPR Unmodified 2350.1877 0.18770079 3806 Q96EA4 SPDL1 Protein Spindly yes yes 0 0 1 By MS/MS 2 0 1 1 73.053 69.969 3 0.034568 85729 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 22.636 14.547 2262500 0 0 2262500 0 0 0 0 0 0 0 0 0 0 0 0 29723 3806 27167 249821 198551 198551 1 LIGVPADAEALSERSGNTPNSPRLAAESK Unmodified 2949.5156 0.51557687 3806 Q96EA4 SPDL1 Protein Spindly yes yes 0 0 2 By MS/MS 2 0 1 1 78.158 70.027 4 3.5209E-30 92147 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.468 84.308 17070000 17070000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29724 3806 27168 249822 198552;198553 198552 2 LIHEQEQQSSS Unmodified 1284.5946 0.59460847 3837 Q96FQ6 S100A16 Protein S100-A16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 11.1 10.396 2 0.00056271 12180 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.11 97.95 1069700000 20391000 810470000 5150500 16484000 10862000 13781000 20534000 15408000 11044000 19485000 24435000 28360000 20507000 18597000 34178000 29725 3837 27169 249823;249824;249825;249826;249827;249828;249829;249830;249831;249832;249833;249834;249835;249836;249837;249838 198554;198555;198556;198557;198558;198559;198560;198561;198562;198563;198564;198565;198566 198556 9 LIHGIDLSK Unmodified 994.58113 0.58113065 3755 Q96BD5 PHF21A PHD finger protein 21A yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 48.002 48.185 2 0.020833 54140 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 52.786 25.649 75692000 0 0 0 0 4662600 6675000 6064700 9735200 5397300 0 9641300 0 11359000 8647600 13509000 29726 3755 27170 249839;249840;249841;249842;249843;249844;249845;249846;249847;249848 198567;198568 198567 2 LIHIPINNIIVGG Unmodified 1371.8238 0.82382054 1807 P60059 SEC61G Protein transport protein Sec61 subunit gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 90.133 90.227 2 0.0019378 104726 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 60.973 52.392 9792300 0 0 0 0 828230 0 0 1483400 0 1924400 1129900 0 0 803310 3623000 29727 1807 27171 249849;249850;249851;249852;249853;249854 198569;198570 198569 2 LIHLEIK Unmodified 864.54329 0.54328858 1373;2079 P36507;Q02750 MAP2K2;MAP2K1 Dual specificity mitogen-activated protein kinase kinase 2;Dual specificity mitogen-activated protein kinase kinase 1 no no 0 0 0 By MS/MS By matching 2 0 2 1 1 66.623 59.517 2 0.031081 79436 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.706 15.438 30896000 24787000 6108300 0 0 0 0 0 0 0 0 0 0 0 0 0 29728 1373;2079 27172 249855;249856 198571 198571 1 LIHPDEDISLEER Unmodified 1564.7733 0.77330111 352 O43670 ZNF207 BUB3-interacting and GLEBS motif-containing protein ZNF207 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 3 24 1 1 1 2 2 2 2 2 2 2 2 2 2 2 2 59.267 58.923 2;3 0.0031605 66993 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 82.85 54.881 955960000 5577800 220560 4144000 38174000 37638000 56981000 50724000 51281000 62003000 53597000 94449000 79106000 62894000 102840000 256330000 29729 352 27173 249857;249858;249859;249860;249861;249862;249863;249864;249865;249866;249867;249868;249869;249870;249871;249872;249873;249874;249875;249876;249877;249878;249879;249880;249881;249882;249883 198572;198573;198574;198575;198576;198577;198578;198579;198580;198581;198582;198583;198584;198585;198586;198587;198588;198589;198590;198591;198592;198593;198594;198595 198590 11 LIHPDEDISLEERR Unmodified 1720.8744 0.87441214 352 O43670 ZNF207 BUB3-interacting and GLEBS motif-containing protein ZNF207 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 15 1 3 2 1 2 3 3 51.311 51.573 3;4 5.484E-41 56482 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 134.61 106.53 340230000 0 0 0 7679600 0 0 0 31897000 37475000 6232900 46567000 0 0 58345000 152030000 29730 352 27174 249884;249885;249886;249887;249888;249889;249890;249891;249892;249893;249894;249895;249896;249897;249898 198596;198597;198598;198599;198600;198601;198602;198603;198604;198605;198606 198598 10 LIIAGTSAYAR Unmodified 1134.6397 0.63970816 1336 P34897 SHMT2 Serine hydroxymethyltransferase, mitochondrial yes yes 0 0 0 By MS/MS 10 0 1 1 55.825 56.449 2 0.0002916 63312 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.649 58.841 22469000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22469000 29731 1336 27175 249899 198607 198607 1 LIIEEDTENENEK Unmodified 1574.7312 0.73116153 2195 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 42.483 42.608 2 0.0002156 47148 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 102.52 88.754 64935000 0 0 0 4285300 3501200 6478400 3977000 4474000 4080900 7293600 6891700 10423000 9400200 4129600 0 29732 2195 27176 249900;249901;249902;249903;249904;249905;249906;249907;249908;249909;249910 198608;198609;198610;198611;198612;198613;198614;198615;198616 198614 9 LIIENRDMPRT Unmodified 1356.7184 0.71836919 4526 Q9HD34 LYRM4 LYR motif-containing protein 4 yes yes 0 0 2 By MS/MS 2 0 1 1 57.827 49.622 3 0.026352 67646 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.01 55.001 24415000 24415000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29733 4526 27177 249911 198617 198617 1 LIIFDAR Unmodified 846.49634 0.49633839 2326 Q13613 MTMR1 Myotubularin-related protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 70.38 70.578 2 0.023406 80741 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 86.866 19.873 50792000 0 0 0 0 0 6108200 3889600 3865800 3874700 5267000 5139000 7558700 4754200 4262700 6072100 29734 2326 27178 249912;249913;249914;249915;249916;249917;249918;249919;249920;249921 198618;198619;198620 198620 3 LIINELSNVMEANAAR Oxidation (M) 1772.9091 0.90908309 3946 Q96P70 IPO9 Importin-9 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.56 3 2 1 13 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 78.036 77.321 2;3 2.4294E-16 89459 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 104.59 84.831 136270000 17372000 0 3621000 4136300 5877300 16939000 5138000 5291900 4036100 19177000 12908000 13111000 6100900 6996000 15568000 29735 3946 27179 249922;249923;249924;249925;249926;249927;249928;249929;249930;249931;249932;249933;249934;249935;249936;249937 198621;198622;198623;198624;198625;198626;198627;198628;198629;198630;198631;198632;198633;198634 198622 5431 14 LIINELSNVMEANAAR Unmodified 1756.9142 0.91416847 3946 Q96P70 IPO9 Importin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.3 3.85 5 1 4 1 3 2 1 1 2 90.871 88.308 2;3 3.2202E-40 111090 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 172.92 148.07 162840000 48492000 89845000 2341000 0 0 1297300 0 0 0 3816900 0 0 0 0 17053000 29736 3946 27179 249938;249939;249940;249941;249942;249943;249944;249945;249946;249947 198635;198636;198637;198638;198639;198640;198641 198640 6 LIINSLYK Unmodified 962.58007 0.58006802 1002 P14625 HSP90B1 Endoplasmin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.9 3.81 6 2 12 4 3 1 1 1 1 1 1 1 1 1 1 1 1 1 71.484 69.698 2 0.006015 79108 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 104.45 46.984 6920200000 2949800000 1474000000 474140000 69068000 93863000 177360000 133340000 129870000 75356000 181880000 244510000 190110000 133370000 168020000 425480000 29737 1002 27180 249948;249949;249950;249951;249952;249953;249954;249955;249956;249957;249958;249959;249960;249961;249962;249963;249964;249965;249966;249967 198642;198643;198644;198645;198646;198647;198648;198649;198650;198651;198652;198653;198654;198655;198656;198657;198658;198659;198660;198661;198662;198663;198664;198665 198656 22 LIINSSPHLISK Unmodified 1320.7765 0.776536 3056 Q7L7V1 DHX32 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 60.854 60.317 3 0.010829 83794 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.044 42.829 84260000 11731000 0 0 4289600 2692600 7399400 4613700 5769600 2545600 5714900 7183200 8365000 8192700 8152900 7610400 29738 3056 27181 249968;249969;249970;249971;249972;249973;249974;249975;249976;249977;249978;249979;249980 198666;198667;198668;198669 198668 4 LIIPIYEK Unmodified 987.60047 0.60046911 4258 Q9BZ29 DOCK9 Dedicator of cytokinesis protein 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 79.225 77.817 2 0.021057 99412 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.064 57.539 88808000 37713000 18383000 2903100 2698300 3289500 3293200 2782000 0 0 5386000 4062300 0 3371500 4926000 0 29739 4258 27182 249981;249982;249983;249984;249985;249986;249987;249988;249989;249990;249991 198670;198671;198672;198673 198671 4 LIIQAGIK Unmodified 854.55894 0.55893865 1319 P32321 DCTD Deoxycytidylate deaminase yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 64.386 57.296 2 0.020143 76580 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.086 23.372 57739000 44780000 12959000 0 0 0 0 0 0 0 0 0 0 0 0 0 29740 1319 27183 249992;249993 198674 198674 1 LIISNNK Unmodified 800.4756 0.47560295 4468 Q9H9A6 LRRC40 Leucine-rich repeat-containing protein 40 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.18 3.74 3 1 7 1 2 1 1 1 1 1 1 1 1 24.988 23.467 2 0.02222 28806 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 107.74 54.035 576560000 174250000 133320000 13595000 34073000 33836000 43468000 37035000 29884000 27435000 0 49673000 0 0 0 0 29741 4468 27184 249994;249995;249996;249997;249998;249999;250000;250001;250002;250003;250004 198675;198676;198677;198678;198679;198680;198681;198682;198683 198678 8 LIITEETAK Unmodified 1016.5754 0.57537657 4625 Q9NSD9 FARSB Phenylalanine--tRNA ligase beta subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.08 3.33 2 1 9 2 1 1 1 1 1 1 1 1 1 1 43.29 42.362 2 0.0078231 54781 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.853 36.177 698630000 0 571060000 13777000 0 0 0 7809700 7382000 5620500 12869000 16888000 14270000 8400300 11214000 29340000 29742 4625 27185 250005;250006;250007;250008;250009;250010;250011;250012;250013;250014;250015;250016 198684;198685;198686;198687;198688;198689;198690;198691 198685 8 LIIVASQAMR Unmodified 1100.6376 0.63759967 2189 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 64.286 64.281 2 0.01329 73739 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.346 5.6279 16627000 0 0 0 2061500 0 3803100 0 0 0 3743400 0 0 0 0 7019400 29743 2189 27186 250017;250018;250019;250020;250021 198692;198693;198694;198695;198696 198692 5 LIIWDSYTTNK Unmodified 1352.6976 0.69761697 1921 P62873 GNB1 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 77.376 77.183 2 0.00087155 89647 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 87.913 68.127 104120000 0 0 4483200 4762100 0 7892100 5541600 0 6956000 12653000 0 14059000 9848800 10817000 27109000 29744 1921 27187 250022;250023;250024;250025;250026;250027;250028;250029;250030;250031 198697;198698;198699;198700;198701;198702 198702 6 LILAGNALQSDSK Unmodified 1328.73 0.72997974 2086 Q03001 DST Dystonin yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 61.571 60.901 2 0.0010792 68590 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.278 23.829 83280000 0 16729000 0 3585400 3078700 6567700 4335300 4501600 3690200 5698500 7836600 6420100 4413700 5052800 11371000 29745 2086 27188 250032;250033;250034;250035;250036;250037;250038;250039;250040;250041;250042;250043;250044;250045 198703;198704;198705;198706 198704 3 LILDFLNSK Unmodified 1061.6121 0.61209643 612 O94967 WDR47 WD repeat-containing protein 47 yes yes 0 0 0 By MS/MS 2 0 1 1 93.201 85.07 2 0.028492 110209 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.897 34.347 4162000 4162000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29746 612 27189 250046 198707 198707 1 LILDLSMK Unmodified 931.54124 0.54123967 1701 P52788 SMS Spermine synthase yes yes 0 0 0 By MS/MS 10 0 1 1 79.747 79.977 2 0.017183 92028 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.073 51.297 9019400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9019400 29747 1701 27190 250047 198708 198708 1 LILDLSMK Oxidation (M) 947.53615 0.5361543 1701 P52788 SMS Spermine synthase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 67.989 68.141 2 0.031971 77057 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 47.443 6.5914 10417000 0 0 0 0 0 0 1790800 0 0 3697400 0 0 0 4929000 0 29748 1701 27190 250048;250049;250050 198709 198709 1 LILDSAR Unmodified 786.45995 0.45995289 1249 P29401 TKT Transketolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.56 3 2 1 13 1 1 1 1 1 1 1 1 1 2 2 2 1 38.911 38.199 1;2 0.019883 46435 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 137.83 44.238 1652500000 156620000 59075000 313480000 0 19728000 24374000 30137000 35550000 15762000 31868000 351420000 330960000 0 238910000 44562000 29749 1249 27191 250051;250052;250053;250054;250055;250056;250057;250058;250059;250060;250061;250062;250063;250064;250065;250066 198710;198711;198712;198713;198714;198715 198712 5 LILDSARATK Unmodified 1086.6397 0.63970816 1249 P29401 TKT Transketolase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 2 2 1 40.14 34.82 2 3.7871E-05 48615 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 144.09 76.108 1331200000 1119100000 172230000 39877000 0 0 0 0 0 0 0 0 0 0 0 0 29750 1249 27192 250067;250068;250069;250070;250071 198716;198717;198718;198719 198718 2 LILEEITR Unmodified 985.5808 0.5807963 2925 Q6P1X5 TAF2 Transcription initiation factor TFIID subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 71.266 71.331 2 0.032055 81058 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 54.549 0 29065000 0 0 0 2119400 1867200 2993500 1610100 0 2081200 3252400 2531200 3258400 2608000 2023100 4720700 29751 2925 27193 250072;250073;250074;250075;250076;250077;250078;250079;250080;250081;250082 198720 198720 1 LILEQMQK Oxidation (M) 1017.5529 0.55286699 1313 P31948 STIP1 Stress-induced-phosphoprotein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 33.051 33.287 2 0.0047946 35437 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 125.08 37.801 169270000 0 0 0 4846300 0 4841800 7414900 4313700 0 0 0 48819000 9209800 22269000 67556000 29752 1313 27194 250083;250084;250085;250086;250087;250088;250089;250090;250091;250092 198721;198722;198723;198724;198725;198726;198727;198728;198729 198724 1960 9 LILEVHQFSR Unmodified 1240.6928 0.69280637 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 65.188 65.178 3 0.0039166 73750 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.056 50.191 53205000 0 0 0 1843300 1546900 11450000 0 4715200 0 0 0 11680000 0 0 21969000 29753 2047 27195 250093;250094;250095;250096;250097;250098 198730 198730 1 LILEYVK Unmodified 876.53206 0.5320552 3053 Q7L5N1 COPS6 COP9 signalosome complex subunit 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.282 67.364 2 0.032282 77246 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 73.039 30.039 321040000 0 0 0 14142000 14337000 28570000 19766000 18390000 15190000 35039000 33537000 31879000 25199000 29704000 55292000 29754 3053 27196 250099;250100;250101;250102;250103;250104;250105;250106;250107;250108;250109;250110 198731;198732;198733;198734;198735 198731 5 LILGNYK Unmodified 819.48544 0.48543935 403 O60488 ACSL4 Long-chain-fatty-acid--CoA ligase 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.873 49.031 2 0.025898 53936 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.833 8.2581 271740000 0 0 0 10617000 15578000 20015000 16929000 21036000 14947000 32305000 36311000 28715000 21162000 20034000 34091000 29755 403 27197 250111;250112;250113;250114;250115;250116;250117;250118;250119;250120;250121;250122 198736;198737;198738 198736 3 LILIESR Unmodified 842.52255 0.52255314 1887 P62277 RPS13 40S ribosomal protein S13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.702 56.826 2 8.9592E-06 65561 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 159.19 71.611 977250000 0 0 0 60709000 59297000 65901000 59997000 73780000 57524000 89318000 108180000 119540000 107970000 78213000 96817000 29756 1887 27198 250123;250124;250125;250126;250127;250128;250129;250130;250131;250132;250133;250134 198739;198740;198741;198742;198743;198744;198745;198746;198747;198748;198749;198750;198751 198751 11 LILIGETIK Unmodified 998.63758 0.6375829 1150 P23219;P35354 PTGS1;PTGS2 Prostaglandin G/H synthase 1;Prostaglandin G/H synthase 2 yes no 0 0 0 By MS/MS 10 0 1 1 78.299 77.827 2 0.031872 90351 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 47.574 23.602 4644400 0 0 0 4644400 0 0 0 0 0 0 0 0 0 0 0 29757 1150 27199 250135 198752 198752 1 LILPELGPVFK Unmodified 1224.7482 0.74819598 2932 Q6P3W7 SCYL2 SCY1-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 92.74 92.847 2 0.002655 107603 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.692 61.727 54032000 0 0 0 0 1485700 2785000 2133000 5559800 4375500 8189800 4409800 4001700 3047600 5211500 12833000 29758 2932 27200 250136;250137;250138;250139;250140;250141;250142;250143;250144;250145;250146 198753;198754;198755;198756;198757;198758;198759;198760;198761;198762;198763;198764;198765 198758 12 LILPVGPAGGNQMLEQYDK Oxidation (M) 2058.0456 0.045576569 1133 P22061 PCMT1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 2 1 2 2 2 1 1 2 1 2 2 2 81.33 81.394 2;3 9.6837E-49 94096 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 134.21 128.93 240470000 0 0 0 6580600 3410200 27244000 12942000 15963000 5751400 18609000 33577000 21879000 20942000 24660000 48910000 29759 1133 27201 250147;250148;250149;250150;250151;250152;250153;250154;250155;250156;250157;250158;250159;250160;250161;250162;250163;250164;250165;250166 198766;198767;198768;198769;198770;198771;198772;198773;198774;198775;198776 198767 1619 11 LILPVGPAGGNQMLEQYDK Unmodified 2042.0507 0.050661947 1133 P22061 PCMT1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 86.707 86.83 2 6.941E-50 100377 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 140.08 126.42 23944000 0 0 0 0 0 0 0 0 0 4205600 0 0 0 2359000 17379000 29760 1133 27201 250167;250168;250169 198777;198778;198779 198778 3 LILQGQLSEAALQK Unmodified 1510.8719 0.87189295 4728 Q9NXN4 GDAP2 Ganglioside-induced differentiation-associated protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 81.376 73.246 2 4.2611E-06 95998 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.43 68.475 10245000 10245000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29761 4728 27202 250170 198780 198780 1 LILREASSVSEELHK Unmodified 1709.9312 0.93119874 4282 Q9C0B1 FTO Alpha-ketoglutarate-dependent dioxygenase FTO yes yes 0 0 1 By MS/MS 2 0 1 1 70.329 62.044 3 0.0011702 82701 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 59.68 40.605 10509000 10509000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29762 4282 27203 250171 198781 198781 1 LILSDELK Unmodified 929.54335 0.54334816 4840 Q9UBF8 PI4KB Phosphatidylinositol 4-kinase beta yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 63.02 63.189 2 0.03661 72375 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.787 11.101 12406000 0 0 0 0 0 6974300 0 0 0 0 5432100 0 0 0 0 29763 4840 27204 250172;250173 198782 198782 1 LILSLDK Unmodified 800.50076 0.50075507 545 O75818 RPP40 Ribonuclease P protein subunit p40 yes yes 0 0 0 By MS/MS 2 0 1 1 70.866 65.049 2 0.040529 82392 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.462 6.0238 74190000 0 74190000 0 0 0 0 0 0 0 0 0 0 0 0 0 29764 545 27205 250174 198783 198783 1 LILSTDTLEELK Unmodified 1373.7654 0.76536219 4116 Q9BRT2 UQCC2 Ubiquinol-cytochrome-c reductase complex assembly factor 2 yes yes 0 0 0 By MS/MS 2 0 1 1 88.455 83.613 2 0.0014433 103928 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.258 66.286 28703000 0 28703000 0 0 0 0 0 0 0 0 0 0 0 0 0 29765 4116 27206 250175 198784 198784 1 LILTGAESK Unmodified 930.5386 0.53859714 4945 Q9UJX4 ANAPC5 Anaphase-promoting complex subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 38.022 38.176 2 0.008436 42175 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 69.628 44.177 93631000 0 0 0 6044400 4301500 9816700 5441200 8377600 5029900 10978000 0 12948000 11784000 7235400 11675000 29766 4945 27207 250176;250177;250178;250179;250180;250181;250182;250183;250184;250185;250186 198785;198786;198787;198788 198786 4 LILTPFER Unmodified 987.57532 0.57531699 4317 Q9H089 LSG1 Large subunit GTPase 1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.853 77.912 2 0.02755 89953 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 57.281 28.132 110880000 0 0 0 8691600 5261000 5824600 5495100 5563700 5943800 11477000 8683600 12153000 11148000 8350200 22283000 29767 4317 27208 250187;250188;250189;250190;250191;250192;250193;250194;250195;250196;250197;250198 198789;198790 198789 2 LILTTLGK Unmodified 857.5586 0.5586043 2893 Q6MZP7 LIN54 Protein lin-54 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.18 64.271 2 0.027721 73703 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 57.177 48.759 106260000 0 0 0 7797600 6387400 10373000 7652200 8390800 7132300 8572400 10237000 14095000 8339300 7982400 9304700 29768 2893 27209 250199;250200;250201;250202;250203;250204;250205;250206;250207;250208;250209;250210 198791;198792;198793;198794;198795;198796 198791 6 LIMAGNYEEALCVAK Oxidation (M) 1696.8164 0.81642826 4049 Q99707 MTR Methionine synthase yes yes 0 1 0 By MS/MS 2 0 1 1 79.3 74.564 2 4.6635E-50 92869 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 163.9 146.46 60973000 0 60973000 0 0 0 0 0 0 0 0 0 0 0 0 0 29769 4049 27210 250211 198797 198797 5550 1 LIMAMQTLIPIDEAK 2 Oxidation (M) 1717.8994 0.8994296 3522 Q8TEX9 IPO4 Importin-4 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79.619 78.565 2 6.2138E-84 91181 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 185.77 170.5 161340000 6877400 45440000 3289500 5905700 8419200 8512000 5897100 6990500 5214000 13014000 17752000 13620000 0 9210300 11195000 29770 3522 27211 250212;250213;250214;250215;250216;250217;250218;250219;250220;250221;250222;250223;250224;250225 198798;198799;198800;198801;198802;198803;198804;198805;198806;198807 198798 5023;5024 10 LIMAMQTLIPIDEAK Oxidation (M) 1701.9045 0.90451498 3522 Q8TEX9 IPO4 Importin-4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 4.67 3.77 6 3 2 2 2 1 1 1 88.874 85.472 2 1.0453E-40 104505 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 146.36 119.68 122050000 20353000 91089000 2380400 0 0 0 0 0 0 0 0 3988900 1502500 2739300 0 29771 3522 27211 250226;250227;250228;250229;250230;250231;250232;250233;250234 198808;198809;198810;198811;198812;198813 198808 5023;5024 6 LIMAMQTLIPIDEAK Unmodified 1685.9096 0.90960036 3522 Q8TEX9 IPO4 Importin-4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 4 3.46 3 1 1 1 1 1 95.442 91.628 2 2.5433E-30 114563 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.17 106.89 61194000 28282000 29925000 624750 0 0 0 0 0 0 0 0 0 0 0 2362400 29772 3522 27211 250235;250236;250237;250238 198814;198815;198816 198814 3 LIMEFLPSGSLK Oxidation (M) 1349.7265 0.72647426 1159 P23458 JAK1 Tyrosine-protein kinase JAK1 yes yes 0 1 0 By matching By MS/MS By MS/MS By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 79.991 80.049 2 0.0095379 92591 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 43.512 14.816 10216000 0 0 0 0 889300 2318400 1506400 0 1167200 0 2588300 0 1746800 0 0 29773 1159 27212 250239;250240;250241;250242;250243;250244 198817 198817 1675 1 LIMGIGHR Oxidation (M) 911.50111 0.50110619 1714 P53396 ACLY ATP-citrate synthase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 25.042 25.279 2 0.0040769 27132 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 102.98 30.985 1694000000 0 0 0 0 115510000 106240000 417850000 342250000 423930000 0 81671000 182070000 0 5787200 18652000 29774 1714 27213 250245;250246;250247;250248;250249;250250;250251;250252;250253;250254 198818;198819;198820;198821;198822;198823;198824 198820 2779 5 LIMGIGHR Unmodified 895.50619 0.50619157 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.341 41.518 2 0.0049782 46521 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 114.54 42.544 1720000000 0 0 0 42784000 64851000 106720000 320290000 370810000 388150000 83396000 113010000 179550000 5891300 10721000 33801000 29775 1714 27213 250255;250256;250257;250258;250259;250260;250261;250262;250263;250264;250265;250266 198825;198826;198827;198828;198829;198830;198831;198832;198833;198834;198835 198831 11 LIMNYLVTEGFK Unmodified 1426.753 0.75302336 4702 Q9NWU2 GID8 Glucose-induced degradation protein 8 homolog yes yes 0 0 0 By MS/MS 10 0 1 1 87.927 88.077 2 0.015995 101883 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.743 24.879 1410100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1410100 29776 4702 27214 250267 198836 198836 1 LIMNYLVTEGFK Oxidation (M) 1442.7479 0.74793799 4702 Q9NWU2 GID8 Glucose-induced degradation protein 8 homolog yes yes 0 1 0 By matching By matching By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 80.154 80.313 2 0.024184 92353 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.597 34.341 24602000 0 0 0 0 0 0 0 2838900 0 5512400 4730900 2921300 3396400 0 5202300 29777 4702 27214 250268;250269;250270;250271;250272;250273 198837 198837 0 LIMRFDDTNPEK Unmodified 1477.7235 0.72351415 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 64.194 57.625 3 0.0019822 77376 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.324 65.904 509620000 460280000 29278000 20055000 0 0 0 0 0 0 0 0 0 0 0 0 29778 848 27215 250274;250275;250276;250277 198838;198839;198840;198841 198840 4 LIMRFDDTNPEK Oxidation (M) 1493.7184 0.71842877 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 43.737 38.443 3 0.017549 48782 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 66.538 56.06 116030000 52507000 0 63522000 0 0 0 0 0 0 0 0 0 0 0 0 29779 848 27215 250278;250279 198842;198843 198843 1056 1 LINANMMVLGHEPR Oxidation (M) 1609.8069 0.80686662 161 O00487 PSMD14 26S proteasome non-ATPase regulatory subunit 14 yes yes 0 1 0 By MS/MS By matching By MS/MS By matching 10 0 4 1 1 1 1 60.836 60.871 3 0.0011142 69445 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 46.964 42.073 16275000 0 0 0 0 1654200 2511200 0 0 0 5746300 0 6363100 0 0 0 29780 161 27216 250280;250281;250282;250283 198844 198844 222 1 LINANMMVLGHEPR Unmodified 1593.812 0.811952 161 O00487 PSMD14 26S proteasome non-ATPase regulatory subunit 14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 72.028 72.298 3 0.0013541 83111 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 51.643 45.481 24030000 0 0 0 0 0 0 0 0 0 3361200 5114300 9092400 0 0 6462600 29781 161 27216 250284;250285;250286;250287 198845;198846;198847 198847 3 LINAVELK Unmodified 898.54877 0.54876789 1779 P56192 MARS Methionine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54.855 53.772 2 0.0082674 59709 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 86.794 28.508 2346800000 50752000 1565700000 54912000 27072000 32929000 63191000 38181000 43676000 34315000 61791000 79138000 67444000 55168000 65748000 106750000 29782 1779 27217 250288;250289;250290;250291;250292;250293;250294;250295;250296;250297;250298;250299;250300;250301;250302 198848;198849;198850;198851;198852;198853;198854;198855;198856;198857;198858;198859;198860;198861;198862;198863;198864 198858 15 LINDCHGSVSEASSEQK Unmodified 1859.832 0.83195498 1638 P50851 LRBA Lipopolysaccharide-responsive and beige-like anchor protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.2 3.82 3 2 5 4 1 1 1 1 1 1 25.682 23.742 2;3 7.8186E-13 30808 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.44 95.633 242880000 0 198420000 2616600 5519100 0 7991700 4504900 0 0 10913000 0 12913000 0 0 0 29783 1638 27218 250303;250304;250305;250306;250307;250308;250309;250310;250311;250312 198865;198866;198867;198868;198869;198870;198871;198872;198873 198869 9 LINGYPSVVNAENK Unmodified 1516.7886 0.78855725 5229 Q9Y5B6 PAXBP1 PAX3- and PAX7-binding protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 65.021 59.104 2 0.024682 75741 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.172 20.697 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29784 5229 27219 250313 198874 198874 1 LINKPGPDTFPDYGDVLR Unmodified 2016.0316 0.031641064 4872 Q9UER7 DAXX Death domain-associated protein 6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.662 78.72 3 0.00040976 90572 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.552 31.43 233680000 0 0 0 5707600 14939000 16117000 13501000 17334000 16083000 35080000 17251000 21009000 15550000 16727000 44380000 29785 4872 27220 250314;250315;250316;250317;250318;250319;250320;250321;250322;250323;250324;250325 198875;198876;198877;198878;198879;198880;198881;198882;198883 198876 9 LINKPMVGPEAGGTK Oxidation (M) 1526.8127 0.81266351 4365 Q9H2G2 SLK STE20-like serine/threonine-protein kinase yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 34.663 33.841 3 0.0002166 42979 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 75.669 70.947 36152000 0 0 9914700 7455500 6420700 0 7964500 0 4396500 0 0 0 0 0 0 29786 4365 27221 250326;250327;250328;250329;250330;250331 198884;198885;198886;198887;198888;198889 198887 5823 6 LINKPMVGPEAGGTK Unmodified 1510.8177 0.81774888 4365 Q9H2G2 SLK STE20-like serine/threonine-protein kinase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40.185 39.519 3 0.0012837 42730 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 40.242 33.184 193340000 95578000 0 4780500 6405500 3919800 5181000 4063000 9139900 4788100 10374000 8652500 9394900 7923100 6657500 16484000 29787 4365 27221 250332;250333;250334;250335;250336;250337;250338;250339;250340;250341;250342;250343;250344;250345 198890;198891;198892;198893;198894;198895;198896;198897;198898;198899;198900 198895 11 LINLTDILK Unmodified 1041.6434 0.64339656 1452 P42336 PIK3CA Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform yes yes 0 0 0 By MS/MS 2 0 1 1 96.502 91.681 2 0.024274 113620 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.439 24.458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29788 1452 27222 250346 198901 198901 1 LINLVGESLR Unmodified 1112.6554 0.65535823 1502 P46379 BAG6 Large proline-rich protein BAG6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.358 76.416 2 4.4966E-08 88035 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 154.49 90.224 484750000 0 0 0 14999000 21681000 30521000 24345000 54567000 20112000 40402000 41840000 69282000 44652000 54077000 68272000 29789 1502 27223 250347;250348;250349;250350;250351;250352;250353;250354;250355;250356;250357;250358 198902;198903;198904;198905;198906;198907;198908;198909;198910;198911;198912 198910 11 LINNAIK Unmodified 784.48069 0.48068833 689;613 O94973;O95782 AP2A2;AP2A1 AP-2 complex subunit alpha-2;AP-2 complex subunit alpha-1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.517 26.717 2 0.049673 28784 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 63.642 28.75 136120000 0 0 0 8747000 8638600 12066000 9936600 12949000 5379500 14177000 11898000 14479000 8811300 11275000 17764000 29790 613;689 27224 250359;250360;250361;250362;250363;250364;250365;250366;250367;250368;250369;250370 198913 198913 1 LINRNTTIPTK Unmodified 1269.7405 0.74048484 1399 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 37.883 32.144 3 0.007243 44315 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.836 24.939 74301000 62251000 12050000 0 0 0 0 0 0 0 0 0 0 0 0 0 29791 1399 27225 250371;250372 198914 198914 0 LINRPIIVFR Unmodified 1239.7816 0.7815618 2626 Q16658 FSCN1 Fascin yes yes 0 0 1 By MS/MS 10 0 1 1 72.991 73.361 3 0.0018666 83927 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.231 76.753 13658000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13658000 29792 2626 27226 250373 198915;198916 198915 2 LINSGGGVR Unmodified 871.48756 0.48756462 3621 Q92547 TOPBP1 DNA topoisomerase 2-binding protein 1 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 17.69 17.88 2 0.0083126 16181 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 69.984 9.64 50892000 0 0 0 0 5700600 6307800 6651000 4527800 4738400 8737900 0 1737600 1070600 7640000 3780400 29793 3621 27227 250374;250375;250376;250377;250378;250379;250380;250381;250382;250383 198917;198918 198918 2 LIPDDLSLLK Unmodified 1125.6645 0.66452593 3409 Q8NCF5 NFATC2IP NFATC2-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 83.99 84.055 2 0.0017601 97277 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 99.139 19.67 444440000 0 0 0 18203000 29584000 32549000 29533000 36046000 36894000 49146000 48986000 47860000 28686000 29948000 57010000 29794 3409 27228 250384;250385;250386;250387;250388;250389;250390;250391;250392;250393;250394;250395 198919;198920;198921;198922;198923;198924;198925;198926;198927;198928;198929;198930;198931;198932 198921 11 LIPDFPVAR Unmodified 1026.5862 0.58621603 3983 Q96S55 WRNIP1 ATPase WRNIP1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 76.572 76.418 2 0.034652 88568 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 46.426 17.088 31130000 0 0 0 12744000 0 0 0 18385000 0 0 0 0 0 0 0 29795 3983 27229 250396;250397 198933;198934 198934 2 LIPDSIGK Unmodified 841.49092 0.49091866 1842 P61247 RPS3A 40S ribosomal protein S3a yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.65 3.65 5 12 1 2 2 1 1 1 1 1 1 1 1 1 1 1 1 45.124 43.663 1;2 0.013906 49606 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 71.342 23.427 3200500000 98845000 1792100000 2705700 22421000 135760000 117700000 134600000 122110000 112860000 120650000 127680000 50320000 119210000 121850000 121710000 29796 1842 27230 250398;250399;250400;250401;250402;250403;250404;250405;250406;250407;250408;250409;250410;250411;250412;250413;250414 198935;198936;198937;198938;198939;198940;198941 198935 6 LIPEMDQIFTEVEMTTLEK Oxidation (M) 2282.1062 0.1061875 5206 Q9Y4L1 HYOU1 Hypoxia up-regulated protein 1 yes yes 0 1 0 By MS/MS 2 0 1 1 101.26 96.55 3 0.0012906 119187 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 42.529 33.885 13774000 0 13774000 0 0 0 0 0 0 0 0 0 0 0 0 0 29797 5206 27231 250415 198942 198942 6604 1 LIPEMDQIFTEVEMTTLEK Unmodified 2266.1113 0.11127287 5206 Q9Y4L1 HYOU1 Hypoxia up-regulated protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 101.28 97.203 3 7.6719E-05 120352 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.11 68.305 32265000 0 32265000 0 0 0 0 0 0 0 0 0 0 0 0 0 29798 5206 27231 250416;250417 198943 198943 0 LIPGPLSPVAR Unmodified 1118.6812 0.68117905 1546 P48634 PRRC2A Protein PRRC2A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.299 71.373 2 0.0072864 81951 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 54.416 37.031 280560000 0 0 0 18243000 20714000 19928000 19578000 21847000 17060000 25072000 25003000 35570000 17630000 22676000 37240000 29799 1546 27232 250418;250419;250420;250421;250422;250423;250424;250425;250426;250427;250428;250429 198944;198945;198946;198947;198948;198949;198950;198951;198952;198953;198954;198955;198956 198945 13 LIPLDEECSMDETPYVETLEPGGSGGSPDGAGGSK Unmodified 3550.5603 0.56033931 3955 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 88.305 84.261 3 0.00094536 104642 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 26.735 21.469 43021000 0 43021000 0 0 0 0 0 0 0 0 0 0 0 0 0 29800 3955 27233 250430;250431 198957;198958;198959 198958 3 LIPLDEECSMDETPYVETLEPGGSGGSPDGAGGSK Oxidation (M) 3566.5553 0.55525394 3955 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 82.795 82.867 3 8.5159E-27 96091 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 56.041 53.799 34930000 0 0 0 0 5870600 0 0 8090700 0 0 0 10273000 0 0 10695000 29801 3955 27233 250432;250433;250434;250435 198960;198961;198962 198962 5443 3 LIPLITSNCTSK Unmodified 1345.7275 0.72753689 456 O75122 CLASP2 CLIP-associating protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 69.848 69.952 2 0.014952 80381 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 43.272 21.228 33188000 0 0 0 1679300 0 3429100 4006800 3810000 0 4698200 0 4861700 3312700 3814000 3576000 29802 456 27234 250436;250437;250438;250439;250440;250441;250442;250443;250444 198963;198964 198963 2 LIPNATGTGTFSPGASPGSEAR Unmodified 2087.0283 0.028346601 2603 Q16512 PKN1 Serine/threonine-protein kinase N1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 2 2 1 1 1 1 1 1 2 1 1 64.402 64.488 2;3 4.8041E-20 73171 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 112.72 97.521 80648000 0 0 0 3642000 3005600 10469000 6201600 3813100 3407700 5612600 8346300 9045800 12310000 4530100 10265000 29803 2603 27235 250445;250446;250447;250448;250449;250450;250451;250452;250453;250454;250455;250456;250457;250458;250459 198965;198966;198967;198968;198969;198970;198971;198972;198973;198974;198975;198976;198977 198969 13 LIPPEETPAPETDINLEVSFAEQALNQK Unmodified 3092.5554 0.555376 3319 Q8N392 ARHGAP18 Rho GTPase-activating protein 18 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 98.085 94.586 3 1.9144E-07 116336 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 55.662 49.502 35271000 0 31676000 3595100 0 0 0 0 0 0 0 0 0 0 0 0 29804 3319 27236 250460;250461;250462 198978;198979;198980;198981 198978 4 LIPPQDILRDVSDLK Unmodified 1720.9723 0.97233527 3733 Q96A65 EXOC4 Exocyst complex component 4 yes yes 0 0 1 By MS/MS 2 0 1 1 95.831 87.701 3 0.0068087 113311 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.964 38.167 19204000 19204000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29805 3733 27237 250463 198982 198982 1 LIPRNTVVPTK Unmodified 1236.7554 0.75540662 932 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 49.442 42.321 2;3 0.0018969 58557 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.979 42.65 244870000 215080000 29794000 0 0 0 0 0 0 0 0 0 0 0 0 0 29806 932 27238 250464;250465;250466 198983;198984;198985;198986;198987 198985 5 LIPTLVSIMQAPADK Oxidation (M) 1611.8906 0.89057948 3946 Q96P70 IPO9 Importin-9 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 2 1 1 1 1 1 2 1 1 81.342 81.461 2 0.00055677 94352 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 66.023 40.586 74103000 0 0 0 0 0 27147000 4135400 4556200 2861500 12727000 0 0 3782100 6814400 12079000 29807 3946 27239 250467;250468;250469;250470;250471;250472;250473;250474;250475;250476;250477 198988;198989;198990;198991;198992;198993;198994;198995 198995 5432 5 LIPTLVSIMQAPADK Unmodified 1595.8957 0.89566485 3946 Q96P70 IPO9 Importin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 91.166 91.304 2 2.5299E-05 105757 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.593 54.274 31127000 0 0 0 0 0 3599100 0 1954500 1735000 3943900 2716200 1840400 0 2797700 12540000 29808 3946 27239 250478;250479;250480;250481;250482;250483;250484;250485 198996;198997;198998;198999;199000 198997 5 LIPTVPLR Unmodified 907.58549 0.58548775 3178 Q86W50 METTL16 Methyltransferase-like protein 16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.204 70.281 2 0.033696 80481 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 53.554 8.8622 51239000 0 0 0 2212000 2943400 4451900 3067000 3093800 2102800 6475400 4607000 5434100 4624200 4242500 7985000 29809 3178 27240 250486;250487;250488;250489;250490;250491;250492;250493;250494;250495;250496;250497 199001;199002;199003;199004;199005 199005 5 LIPVITSNCTSK Unmodified 1331.7119 0.71188683 3094 Q7Z460 CLASP1 CLIP-associating protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 59.113 59.304 2 0.050278 66738 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 45.598 30.39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29810 3094 27241 250498 199006 199006 1 LIPVLQVK Unmodified 908.60589 0.60588884 2839 Q63ZY3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 yes yes 0 0 0 By MS/MS 10 0 1 1 74.991 75.208 2 0.030317 86644 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 55.604 13.129 19172000 0 0 0 0 0 0 0 0 0 0 19172000 0 0 0 0 29811 2839 27242 250499 199007 199007 1 LIPVLVNGMK Oxidation (M) 1098.6471 0.64710173 3692 Q92973 TNPO1 Transportin-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 68.354 68.496 2 0.0011859 78593 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 101.64 101.64 271890000 0 0 0 0 17656000 36531000 31080000 20380000 19131000 35722000 32530000 38073000 0 0 40789000 29812 3692 27243 250500;250501;250502;250503;250504;250505;250506;250507;250508 199008;199009;199010;199011;199012;199013;199014;199015;199016;199017;199018 199011 5257 11 LIPVLVNGMK Unmodified 1082.6522 0.65218711 3692 Q92973 TNPO1 Transportin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 80.359 79.238 2 0.0034067 99859 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.352 89.61 822020000 190460000 226930000 15516000 18203000 15024000 37374000 19161000 28310000 16804000 36344000 36889000 39524000 28700000 30188000 82585000 29813 3692 27243 250509;250510;250511;250512;250513;250514;250515;250516;250517;250518;250519;250520;250521;250522;250523;250524 199019;199020;199021;199022;199023;199024;199025;199026;199027;199028;199029;199030;199031;199032;199033;199034;199035;199036;199037 199023 19 LIPVPMVGFK Oxidation (M) 1115.6413 0.64128807 3081 Q7Z3B4 NUP54 Nucleoporin p54 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 20 2 1 2 1 1 2 2 2 2 2 2 1 80.806 80.863 2 0.015937 93325 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 45.081 28.879 146470000 0 0 0 7075100 6277100 12868000 7956500 8303200 13920000 17313000 13189000 21104000 16240000 13337000 8888100 29814 3081 27244 250525;250526;250527;250528;250529;250530;250531;250532;250533;250534;250535;250536;250537;250538;250539;250540;250541;250542;250543;250544 199038;199039;199040 199038 4695 3 LIPVPMVGFK Unmodified 1099.6464 0.64637345 3081 Q7Z3B4 NUP54 Nucleoporin p54 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 86.73 86.889 2 0.012262 100699 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 52.786 48.947 29240000 0 0 0 0 0 0 0 5968800 0 0 4184400 4796500 0 2877600 11413000 29815 3081 27244 250545;250546;250547;250548;250549 199041;199042;199043;199044;199045 199043 5 LIPVSDINDK Unmodified 1112.6077 0.60773933 2124 Q06203 PPAT Amidophosphoribosyltransferase yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 52.596 52.879 2 0.01418 59689 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 50.834 23.58 145710000 0 0 0 0 0 31175000 0 0 5456400 16458000 41146000 38396000 0 13080000 0 29816 2124 27245 250550;250551;250552;250553;250554;250555 199046;199047;199048 199047 3 LIQAAYDVLSDPQER Unmodified 1716.8683 0.86826413 2723 Q5F1R6 DNAJC21 DnaJ homolog subfamily C member 21 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 77.136 77.307 2 6.5856E-27 89274 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 131.37 98.763 41212000 0 0 0 0 0 0 0 0 3718100 9436100 10337000 0 0 4576500 13144000 29817 2723 27246 250556;250557;250558;250559;250560;250561;250562;250563 199049;199050;199051;199052;199053;199054;199055;199056 199050 8 LIQAAYQVK Unmodified 1032.5968 0.59678072 401 O60447 EVI5 Ecotropic viral integration site 5 protein homolog yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching 7.33 3.77 2 4 1 1 1 1 1 1 45.598 43.41 2 0.011185 59012 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.265 53.329 50112000 11961000 23384000 0 1564300 0 3622400 0 0 0 4004200 0 0 0 0 5576100 29818 401 27247 250564;250565;250566;250567;250568;250569 199057;199058 199058 2 LIQAIDHNEGFSLI Unmodified 1568.8199 0.81985737 2725 Q5GLZ8 HERC4 Probable E3 ubiquitin-protein ligase HERC4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.12 3.89 3 1 4 1 2 1 1 1 1 1 89.019 86.736 2 0.0027637 100700 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 62.303 37.921 112920000 11694000 63795000 18077000 0 0 4217500 0 0 0 4786600 0 2580000 0 0 7773200 29819 2725 27248 250570;250571;250572;250573;250574;250575;250576;250577 199059;199060;199061;199062;199063;199064;199065;199066 199060 8 LIQCENEVGK Unmodified 1188.5809 0.58087266 3617 Q92540 SMG7 Protein SMG7 yes yes 0 0 0 By MS/MS 10 0 1 1 24.906 25.573 2 0.020457 26148 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.118 23.723 4688400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4688400 29820 3617 27249 250578 199067 199067 1 LIQDQQEQIQHLK Unmodified 1619.8631 0.86311917 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.66 2.95 4 1 24 3 2 2 2 2 2 2 2 2 2 2 2 2 2 43.744 43.066 2;3 5.4322E-30 56206 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 221.09 160.58 1741300000 0 659870000 47687000 62315000 49482000 69996000 74994000 63455000 57359000 69701000 116430000 112940000 114850000 99526000 142740000 29821 3676 27250 250579;250580;250581;250582;250583;250584;250585;250586;250587;250588;250589;250590;250591;250592;250593;250594;250595;250596;250597;250598;250599;250600;250601;250602;250603;250604;250605;250606;250607 199068;199069;199070;199071;199072;199073;199074;199075;199076;199077;199078;199079;199080;199081;199082;199083;199084;199085;199086 199073 14 LIQEAAGR Unmodified 856.47667 0.47666558 585 O94788 ALDH1A2 Retinal dehydrogenase 2 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching 10 0 5 1 1 1 1 1 15.836 15.991 2 0.0064531 15089 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 100.74 16.383 393590000 0 0 0 0 990030 0 79983000 0 0 0 0 0 63308000 114580000 134740000 29822 585 27251 250608;250609;250610;250611;250612 199087 199087 1 LIQEFTK Unmodified 877.49092 0.49091866 3278 Q8IYB1 MB21D2 Protein MB21D2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 45.595 39.97 2 0.035514 55091 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.244 7.3971 6960100 3755600 0 3204600 0 0 0 0 0 0 0 0 0 0 0 0 29823 3278 27252 250613;250614 199088 199088 1 LIQELAK Unmodified 813.496 0.49600404 353 O43681 ASNA1 ATPase ASNA1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.381 36.563 2 0.023725 38988 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 84.244 9.8284 594870000 0 0 0 32385000 32758000 47777000 37145000 43160000 23532000 61083000 52232000 64045000 64895000 51693000 84163000 29824 353 27253 250615;250616;250617;250618;250619;250620;250621;250622;250623;250624;250625;250626 199089;199090;199091;199092;199093;199094 199092 6 LIQEMTVTWEEK Unmodified 1505.7436 0.74358089 4576 Q9NQT8 KIF13B Kinesin-like protein KIF13B yes yes 0 0 0 By MS/MS 10 0 1 1 35.053 35.209 3 0.048887 38787 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 42.031 15.672 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29825 4576 27254 250627 199095 199095 1 LIQEQHPEEELIK Unmodified 1604.841 0.84098675 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.5 3.61 6 1 3 2 3 2 1 1 1 55.14 51.176 2;3 5.9923E-48 66823 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 208.27 175.21 1014600000 52579000 778060000 35995000 0 0 49531000 0 0 0 0 0 56010000 42386000 0 0 29826 2344 27255 250628;250629;250630;250631;250632;250633;250634;250635;250636;250637 199096;199097;199098;199099;199100;199101;199102;199103;199104;199105;199106 199098 8 LIQESDQHLK Unmodified 1209.6354 0.63535107 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.97 3.45 7 1 23 2 4 2 2 2 2 1 2 2 2 2 2 2 2 2 22.655 21.869 2;3 0.0010631 22457 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 103.7 81.707 5084200000 71584000 329740000 92968000 191080000 241810000 444870000 67976000 290010000 330130000 399350000 434490000 745300000 488520000 496800000 459550000 29827 213 27256 250638;250639;250640;250641;250642;250643;250644;250645;250646;250647;250648;250649;250650;250651;250652;250653;250654;250655;250656;250657;250658;250659;250660;250661;250662;250663;250664;250665;250666;250667;250668 199107;199108;199109;199110;199111;199112;199113;199114;199115;199116;199117;199118;199119;199120;199121;199122;199123;199124;199125;199126;199127;199128;199129;199130;199131 199113 19 LIQESDQHLKDVEK Unmodified 1680.8683 0.86826413 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.085 81.144 3 0.016507 93493 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 25.322 14.06 334670000 0 0 0 8384300 13638000 24852000 16461000 18446000 13498000 30696000 49971000 40147000 17317000 24788000 76474000 29828 213 27257 250669;250670;250671;250672;250673;250674;250675;250676;250677;250678;250679;250680 199132 199132 1 LIQESPTLSK Unmodified 1114.6234 0.6233894 2915 Q6P1A2 LPCAT3 Lysophospholipid acyltransferase 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.625 38.804 2 0.0016854 42566 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 89.355 47.852 53440000 0 0 0 4894400 4413200 4111100 3546200 4792100 2878600 5080800 5047800 6348600 3699300 3765500 4862000 29829 2915 27258 250681;250682;250683;250684;250685;250686;250687;250688;250689;250690;250691;250692 199133;199134;199135;199136;199137;199138;199139;199140;199141;199142;199143;199144 199142 12 LIQEWNSVDLR Unmodified 1371.7147 0.71466402 5075 Q9Y223 GNE Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase;UDP-N-acetylglucosamine 2-epimerase (hydrolyzing);N-acetylmannosamine kinase yes yes 0 0 0 By MS/MS 10 0 1 1 73.987 74.326 2 9.08E-05 85199 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 111.06 79.983 8110900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8110900 29830 5075 27259 250693 199145 199145 1 LIQHENIHSGK Unmodified 1274.6731 0.67313356 3937 Q96NG8 ZNF582 Zinc finger protein 582 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching 7 3.69 1 1 3 2 1 1 1 40.904 39.104 2 0.00045987 43214 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 84.568 8.3463 29056000 0 19662000 0 0 0 0 0 0 1467500 3087300 0 0 0 0 4839300 29831 3937 27260 250694;250695;250696;250697;250698 199146;199147 199146 2 LIQIAAR Unmodified 783.49667 0.49667274 4162 Q9BUJ2 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.364 42.541 2 0.033387 48103 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 72.021 2.5885 86875000 0 0 0 7688100 5182700 6444700 5753100 4068900 4129400 7231400 9461300 12990000 7521600 5925500 10478000 29832 4162 27261 250699;250700;250701;250702;250703;250704;250705;250706;250707;250708;250709;250710 199148;199149;199150;199151 199151 4 LIQIEAENSDLK Unmodified 1371.7246 0.72456001 2788 Q5T9S5 CCDC18 Coiled-coil domain-containing protein 18 yes yes 0 0 0 By MS/MS 2 0 1 1 66.076 60.158 2 0.023931 76931 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 61.765 37.744 43680000 0 43680000 0 0 0 0 0 0 0 0 0 0 0 0 0 29833 2788 27262 250711 199152 199152 1 LIQIQDNGTGIR Unmodified 1326.7256 0.72556306 1418 P40692 MLH1 DNA mismatch repair protein Mlh1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 56.838 57.078 2 2.4225E-05 64906 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 101.65 48.93 42871000 0 0 0 0 0 6282400 4949200 9341900 0 7437800 7001400 7857900 0 0 0 29834 1418 27263 250712;250713;250714;250715;250716;250717;250718;250719 199153;199154;199155;199156;199157;199158;199159;199160 199155 8 LIQIQDNGTGIRK Unmodified 1454.8205 0.82052608 1418 P40692 MLH1 DNA mismatch repair protein Mlh1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.72 2 13 1 1 1 1 2 1 1 1 1 1 1 1 1 1 45.593 44.887 2;3 3.9026E-13 49045 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.407 86.139 436870000 33227000 0 2719000 20171000 18220000 40817000 26423000 26165000 27179000 32097000 36499000 43929000 49897000 32925000 46600000 29835 1418 27264 250720;250721;250722;250723;250724;250725;250726;250727;250728;250729;250730;250731;250732;250733;250734 199161;199162;199163;199164;199165;199166;199167;199168;199169;199170;199171;199172;199173;199174;199175;199176;199177;199178;199179;199180 199167 20 LIQLMEEIMAEK Unmodified 1446.7462 0.74622343 3670 Q92841 DDX17 Probable ATP-dependent RNA helicase DDX17 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 96.935 91.548 2 1.2039E-18 114940 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 159.4 113.25 100210000 46598000 53614000 0 0 0 0 0 0 0 0 0 0 0 0 0 29836 3670 27265 250735;250736;250737 199181;199182;199183 199181 3 LIQLMEEIMAEK 2 Oxidation (M) 1478.7361 0.73605267 3670 Q92841 DDX17 Probable ATP-dependent RNA helicase DDX17 yes yes 0 2 0 By MS/MS 2 0 1 1 75.914 67.784 2 0.000228 89462 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.456 67.202 7102800 7102800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29837 3670 27265 250738 199184 199184 5205;5206 1 LIQLMEEIMAEK Oxidation (M) 1462.7411 0.74113805 3670 Q92841 DDX17 Probable ATP-dependent RNA helicase DDX17 yes yes 0 1 0 By MS/MS 2 0 1 1 83.15 75.019 2 0.026148 98164 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.353 8.9052 5716100 5716100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29838 3670 27265 250739 199185 199185 5205;5206 1 LIQMAYESQR Unmodified 1237.6125 0.61250714 2979 Q6UWE0 LRSAM1 E3 ubiquitin-protein ligase LRSAM1 yes yes 0 0 0 By MS/MS 10 0 1 1 48.693 48.753 2 0.034641 55166 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 41.724 18.404 6133500 0 0 0 0 0 6133500 0 0 0 0 0 0 0 0 0 29839 2979 27266 250740 199186 199186 1 LIQMRPFLENR Oxidation (M) 1431.7657 0.76565374 1556 P49005 POLD2 DNA polymerase delta subunit 2 yes yes 0 1 1 By MS/MS 10 0 1 1 49.677 49.736 3 0.016223 56527 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 50.194 28.965 18590000 0 0 0 0 0 0 18590000 0 0 0 0 0 0 0 0 29840 1556 27267 250741 199187 199187 2470 0 LIQMRPFLENR Unmodified 1415.7707 0.77073911 1556 P49005 POLD2 DNA polymerase delta subunit 2 yes yes 0 0 1 By MS/MS By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 71.777 71.945 3 0.0093058 81996 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.634 21.692 24442000 0 0 0 0 0 4283100 0 2183300 0 4209300 0 0 0 2245500 11521000 29841 1556 27267 250742;250743;250744;250745;250746 199188 199188 1 LIQNLDANHDGR Unmodified 1364.6797 0.6796755 3837 Q96FQ6 S100A16 Protein S100-A16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 1 2 2 2 2 1 2 29.749 29.937 2;3 2.7177E-05 32808 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 99.568 89.197 410710000 0 0 0 60513000 17752000 28218000 25506000 44950000 12042000 23323000 29922000 42702000 35217000 22031000 68535000 29842 3837 27268 250747;250748;250749;250750;250751;250752;250753;250754;250755;250756;250757;250758;250759;250760;250761;250762;250763;250764;250765;250766;250767;250768 199189;199190;199191;199192;199193;199194;199195;199196;199197;199198;199199;199200;199201;199202;199203;199204 199201 8 LIQNNHYAMEDVATRR Unmodified 1929.9479 0.94792821 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 43.184 43.312 4 1.014E-05 47877 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 64.136 54.853 158480000 0 0 0 6009200 5816700 18335000 4440400 7107800 0 18706000 0 22325000 0 20894000 54841000 29843 2344 27269 250769;250770;250771;250772;250773;250774;250775;250776;250777 199205;199206;199207;199208;199209;199210;199211 199207 7 LIQNVFEIK Unmodified 1102.6386 0.63864553 160 O00471 EXOC5 Exocyst complex component 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.91 3.42 2 1 8 2 1 1 1 1 1 1 1 1 1 79.175 78.28 2 0.0026386 95322 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 117.04 48.614 124180000 0 50344000 12442000 0 5891100 10079000 5001100 8084500 5655600 0 8683100 10658000 7345400 0 0 29844 160 27270 250778;250779;250780;250781;250782;250783;250784;250785;250786;250787;250788 199212;199213;199214;199215;199216;199217;199218;199219;199220;199221;199222 199219 11 LIQPDHPQISQQVAASLEK Unmodified 2101.1168 0.11676768 2725 Q5GLZ8 HERC4 Probable E3 ubiquitin-protein ligase HERC4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 72.384 71.196 3 6.2385E-52 90393 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 135.38 122.34 504010000 93806000 248690000 61817000 0 3636700 15109000 4620700 4724400 4636700 12642000 10103000 11628000 5442700 6946800 20203000 29845 2725 27271 250789;250790;250791;250792;250793;250794;250795;250796;250797;250798;250799;250800;250801;250802;250803 199223;199224;199225;199226;199227;199228;199229;199230;199231;199232;199233;199234;199235;199236;199237;199238;199239 199226 17 LIQQELSSLK Unmodified 1157.6656 0.66558856 5048 Q9UPM8 AP4E1 AP-4 complex subunit epsilon-1 yes yes 0 0 0 By MS/MS 2 0 1 1 69.098 63.199 2 0.035125 80711 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.279 26.268 58180000 0 58180000 0 0 0 0 0 0 0 0 0 0 0 0 0 29846 5048 27272 250804 199240 199240 0 LIQQQLEK Unmodified 998.57605 0.57604528 5240 Q9Y5M8 SRPRB Signal recognition particle receptor subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 30.397 30.144 2 0.0060247 32130 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 104.37 35.19 283710000 0 35186000 0 21593000 23577000 17422000 22170000 18144000 17678000 26224000 26852000 24402000 30595000 19870000 0 29847 5240 27273 250805;250806;250807;250808;250809;250810;250811;250812;250813;250814;250815;250816;250817 199241;199242;199243;199244;199245;199246;199247;199248 199248 6 LIQQQVVTTASAPLQTPGAPNPAQVPASSDSPSQQPK Unmodified 3737.9224 0.92243155 3915 Q96L91 EP400 E1A-binding protein p400 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 2 2 2 2 1 2 2 1 2 2 77.961 78.065 3;4 1.2516E-30 90334 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 52.345 50.683 167590000 0 0 0 0 22417000 14839000 15248000 14578000 7458000 0 19834000 31406000 5783900 17055000 18967000 29848 3915 27274 250818;250819;250820;250821;250822;250823;250824;250825;250826;250827;250828;250829;250830;250831;250832;250833;250834;250835 199249;199250;199251;199252;199253;199254;199255;199256;199257;199258;199259;199260;199261 199258 13 LIQQTFR Unmodified 904.51305 0.51305109 2114 Q05397 PTK2 Focal adhesion kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 35.2 35.802 2 0.024035 38171 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.614 30.931 28798000 0 0 0 0 0 0 0 0 0 0 0 8562500 6588300 0 13648000 29849 2114 27275 250836;250837;250838 199262;199263;199264 199262 3 LIQRAEEMK Unmodified 1116.5961 0.59612879 1601;32 P49792;P0DJD0;P0DJD1;A6NKT7;Q7Z3J3 RANBP2;RGPD1;RGPD2;RGPD3;RGPD4 E3 SUMO-protein ligase RanBP2;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RanBP2-like and GRIP domain-containing protein 3;RanBP2-like and GRIP domain-containing protein 4 no no 0 0 1 By MS/MS 2 0 1 1 26.014 21.81 2 0.04627 28834 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.233 43.52 10126000 0 10126000 0 0 0 0 0 0 0 0 0 0 0 0 0 29850 1601;32 27276 250839 199265 199265 1 LIQSEVALNDLHLTK Unmodified 1692.941 0.94103514 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 3 21 1 1 1 1 1 2 2 2 2 2 2 1 2 2 2 77.908 77.35 2;3 5.7555E-08 89284 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 70.41 64.003 601930000 8391900 40625000 9489000 5924000 18978000 33288000 25765000 43532000 59017000 50719000 53747000 44094000 37778000 42023000 128560000 29851 2556 27277 250840;250841;250842;250843;250844;250845;250846;250847;250848;250849;250850;250851;250852;250853;250854;250855;250856;250857;250858;250859;250860;250861;250862;250863 199266;199267;199268;199269;199270;199271;199272;199273;199274;199275;199276;199277;199278;199279;199280;199281;199282 199267 15 LIQSHPESAEDLQEK Unmodified 1722.8424 0.84244331 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.32 2.16 1 1 20 2 1 2 1 2 1 2 1 2 2 2 2 2 34.175 33.946 2;3 1.3595E-97 36975 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 212.59 172.74 515590000 0 34021000 0 24122000 25449000 4113100 36631000 19768000 16893000 6053900 93731000 79203000 37827000 45991000 91788000 29852 2344 27278 250864;250865;250866;250867;250868;250869;250870;250871;250872;250873;250874;250875;250876;250877;250878;250879;250880;250881;250882;250883;250884;250885 199283;199284;199285;199286;199287;199288;199289;199290;199291;199292;199293;199294;199295;199296;199297;199298;199299;199300;199301;199302 199292 20 LIQSIVR Unmodified 827.52289 0.52288749 3994 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 44.115 44.371 2 0.023412 49369 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 86.512 5.9571 268170000 0 0 0 0 13669000 17916000 0 23082000 13449000 33062000 34323000 36431000 29180000 19440000 47621000 29853 3994 27279 250886;250887;250888;250889;250890;250891;250892;250893;250894;250895 199303;199304;199305;199306;199307;199308 199305 6 LIQTCQHVEVNASRQEAK Unmodified 2110.0589 0.058935223 273 O15344 MID1 E3 ubiquitin-protein ligase Midline-1 yes yes 0 0 1 By MS/MS 2 0 1 1 39.14 32.578 3 0.030326 45289 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 41.088 19.841 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29854 273 27280 250896 199309 199309 1 LIQTMMFVSEVK Unmodified 1424.7407 0.74074412 3919 Q96LI5 CNOT6L CCR4-NOT transcription complex subunit 6-like yes yes 0 0 0 By MS/MS 2 0 1 1 90.249 82.119 2 0.00094841 106689 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.108 57.268 6221600 6221600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29855 3919 27281 250897 199310 199310 1 LIQVLIGDEPER Unmodified 1380.7613 0.76127986 4154 Q9BTY7 HGH1 Protein HGH1 homolog yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 76.299 76.442 2 2.4838E-05 87721 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 109.42 78.345 31479000 0 0 0 0 0 4723500 0 0 0 2824000 5478400 4642800 2475500 3327400 8007200 29856 4154 27282 250898;250899;250900;250901;250902;250903;250904 199311;199312;199313 199312 3 LIQYCQSK Unmodified 1038.5168 0.51681584 1013 P15121 AKR1B1 Aldose reductase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 7 3.87 3 5 1 1 1 1 1 1 1 1 26.534 25.147 2 0.0090255 27052 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 84.227 54.868 892220000 101870000 704840000 4765800 0 0 0 0 0 0 2386100 18340000 0 2882800 16461000 40673000 29857 1013 27283 250905;250906;250907;250908;250909;250910;250911;250912 199314;199315;199316;199317;199318 199317 4 LIRDEGLAVMDK Unmodified 1358.7228 0.72278587 2191 Q12797 ASPH Aspartyl/asparaginyl beta-hydroxylase yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By matching By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 55.65 54.351 3 0.009609 75873 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.023 39.462 34462000 5001000 0 0 0 1962200 9765300 2894000 0 0 0 0 8958900 0 5880400 0 29858 2191 27284 250913;250914;250915;250916;250917;250918 199319;199320 199320 2 LIRELAEFEK Unmodified 1246.6921 0.69213767 3831 Q96F10 SAT2 Diamine acetyltransferase 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 65.54 65.485 3 0.0050867 75426 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 62.166 49.55 135910000 0 0 0 5997600 7357300 20573000 0 0 0 23287000 30965000 47727000 0 0 0 29859 3831 27285 250919;250920;250921;250922;250923;250924 199321;199322;199323;199324;199325;199326;199327 199323 7 LIRGPAETEATTD Unmodified 1372.6834 0.68342347 2190 Q12792 TWF1 Twinfilin-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 34.216 34.402 2 0.0035468 37283 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 82.417 70.181 128610000 0 0 0 5547000 3936000 7839800 8326500 5986400 5310800 0 22520000 18337000 6418200 11669000 32715000 29860 2190 27286 250925;250926;250927;250928;250929;250930;250931;250932;250933;250934;250935 199328;199329;199330;199331;199332;199333 199331 6 LIRQQMEEQVAQK Unmodified 1599.8403 0.84027524 4890 Q9UH65 SWAP70 Switch-associated protein 70 yes yes 0 0 1 By MS/MS By MS/MS 2 0 4 2 2 41.725 35.82 2;3 1.4329E-24 48970 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 153.34 116.82 583290000 555250000 28039000 0 0 0 0 0 0 0 0 0 0 0 0 0 29861 4890 27287 250936;250937;250938;250939 199334;199335;199336;199337 199337 3 LIRQQMEEQVAQK Oxidation (M) 1615.8352 0.83518986 4890 Q9UH65 SWAP70 Switch-associated protein 70 yes yes 0 1 1 By MS/MS By MS/MS 2 0 3 2 1 23.395 19.122 3 0.0020819 27429 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.519 50.857 185060000 183590000 0 1471800 0 0 0 0 0 0 0 0 0 0 0 0 29862 4890 27287 250940;250941;250942 199338;199339 199339 6245 2 LIRSEDGEIVSTPR Unmodified 1570.8315 0.83148469 2184 Q12769 NUP160 Nuclear pore complex protein Nup160 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 42.091 42.299 3 0.002982 47331 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 32.252 27.157 43844000 0 0 0 3538300 0 0 5282800 0 4227600 7729100 5417300 5113400 7400600 5134700 0 29863 2184 27288 250943;250944;250945;250946;250947;250948;250949;250950 199340;199341;199342;199343;199344;199345;199346;199347 199341 8 LISDINK Unmodified 801.45962 0.45961853 2047;241 Q01082;O15020 SPTBN1;SPTBN2 Spectrin beta chain, non-erythrocytic 1;Spectrin beta chain, non-erythrocytic 2 no no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 8 3.46 4 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 27.609 26.658 2 0.025542 29088 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 80.555 20.946 994860000 58550000 667700000 26017000 12056000 12750000 20667000 15226000 12644000 12124000 20992000 35178000 27312000 15971000 21456000 36211000 29864 2047;241 27289 250951;250952;250953;250954;250955;250956;250957;250958;250959;250960;250961;250962;250963;250964;250965;250966 199348;199349;199350;199351 199348 4 LISDNEALVDDK Unmodified 1330.6616 0.6616254 1026 P15822 HIVEP1 Zinc finger protein 40 yes yes 0 0 0 By MS/MS 2 0 1 1 53.374 47.582 2 0.0094879 61629 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.771 52.684 45338000 0 45338000 0 0 0 0 0 0 0 0 0 0 0 0 0 29865 1026 27290 250967 199352 199352 1 LISEEDLLRK Unmodified 1214.6871 0.68705229 743 P01106 MYC Myc proto-oncogene protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 2 1 1 1 59.91 58.244 3 0.0016704 65889 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 61.353 36.499 65323000 4198500 0 15047000 5794900 0 0 7942700 0 8409400 0 0 0 0 8266000 15665000 29866 743 27291 250968;250969;250970;250971;250972;250973;250974;250975;250976;250977;250978;250979;250980;250981 199353;199354;199355;199356;199357;199358;199359;199360;199361;199362;199363;199364;199365 199354 13 LISEIEYR Unmodified 1021.5444 0.5444108 3581 Q8WX93 PALLD Palladin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 1 2 1 1 2 1 1 1 2 1 52.419 52.563 2 0.0048222 59755 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 113.89 34.435 417690000 0 0 0 21600000 19985000 25941000 26391000 20082000 19950000 44529000 37387000 48547000 38026000 43379000 71876000 29867 3581 27292 250982;250983;250984;250985;250986;250987;250988;250989;250990;250991;250992;250993;250994;250995;250996 199366;199367;199368;199369;199370;199371;199372;199373;199374;199375;199376 199368 11 LISEILSESVVPDVR Unmodified 1654.9142 0.91415169 3714 Q969G3 SMARCE1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 88.125 88.255 2 0.0065086 102069 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.576 35.944 8130300 0 0 0 0 0 0 0 0 0 3688300 0 0 0 0 4442100 29868 3714 27293 250997;250998 199377 199377 1 LISELFQK Unmodified 976.55933 0.55933258 3143 Q86U86 PBRM1 Protein polybromo-1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.897 70.971 2 0.010604 81631 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 79.116 40.31 53162000 0 0 0 2670200 2932600 3918900 4690100 3846000 2868600 4137100 4959200 4784300 5328400 3909400 9117000 29869 3143 27294 250999;251000;251001;251002;251003;251004;251005;251006;251007;251008;251009;251010 199378;199379;199380;199381;199382;199383 199380 6 LISELQK Unmodified 829.49092 0.49091866 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 37.334 33.159 2 0.041516 43357 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.939 14.042 123760000 0 119810000 3947200 0 0 0 0 0 0 0 0 0 0 0 0 29870 2804 27295 251011;251012 199384 199384 1 LISELSLLNHK Unmodified 1265.7343 0.73433683 4840 Q9UBF8 PI4KB Phosphatidylinositol 4-kinase beta yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 73.743 73.893 3 0.00033323 84526 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.726 56.754 36173000 0 0 0 0 0 3995600 0 2905600 4658300 4587700 0 0 4875300 6253200 8897000 29871 4840 27296 251013;251014;251015;251016;251017;251018;251019 199385;199386;199387;199388 199387 4 LISEVDSDGDGEISFQEFLTAAK Unmodified 2470.1751 0.17513 4781 Q9NZT1 CALML5 Calmodulin-like protein 5 yes yes 0 0 0 By MS/MS 2 0 1 1 95.969 93.477 3 0.0058108 113083 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 17.262 14.381 1124500 0 0 1124500 0 0 0 0 0 0 0 0 0 0 0 0 29872 4781 27297 251020 199389 199389 1 LISGLPSLNHPVEPK Unmodified 1599.8984 0.89844205 2465 Q14CX7 NAA25 N-alpha-acetyltransferase 25, NatB auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 15 1 2 2 2 1 2 2 1 1 1 71.432 71.632 2;3 6.3526E-55 82235 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 163.99 123.4 1664000000 0 0 0 0 0 6001000 410070000 632100000 484430000 25654000 33396000 57463000 2655800 2350400 9826100 29873 2465 27298 251021;251022;251023;251024;251025;251026;251027;251028;251029;251030;251031;251032;251033;251034;251035 199390;199391;199392;199393;199394;199395;199396;199397;199398;199399;199400;199401 199400 9 LISGWVSR Unmodified 916.51305 0.51305109 237 O14980 XPO1 Exportin-1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.15 55.281 2 0.0054881 62391 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 135.84 44.258 307300000 0 0 0 12108000 15484000 32134000 19142000 20964000 11826000 29135000 30285000 32444000 22319000 30572000 50888000 29874 237 27299 251036;251037;251038;251039;251040;251041;251042;251043;251044;251045;251046;251047 199402;199403;199404;199405;199406;199407;199408;199409 199403 8 LISLAAQK Unmodified 842.52255 0.52255314 2214 Q12962 TAF10 Transcription initiation factor TFIID subunit 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.82 41.996 2 0.0068383 46990 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 94.539 15.232 184770000 0 0 0 9802600 10772000 13360000 11759000 10387000 7870500 19442000 19891000 22231000 22299000 14559000 22393000 29875 2214 27300 251048;251049;251050;251051;251052;251053;251054;251055;251056;251057;251058;251059 199410;199411;199412;199413;199414;199415;199416;199417;199418;199419 199412 9 LISLFQAMK Oxidation (M) 1065.5893 0.5892525 2501 Q15149 PLEC Plectin yes yes 0 1 0 By MS/MS 10 0 1 1 75.195 74.675 2 0.018238 86665 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 89.296 53.11 10075000 0 0 0 10075000 0 0 0 0 0 0 0 0 0 0 0 29876 2501 27301 251060 199420 199420 4104 0 LISLLNEK Unmodified 928.55933 0.55933258 4773 Q9NZM1 MYOF Myoferlin yes yes 0 0 0 By MS/MS 10 0 1 1 65.213 65.394 2 0.019504 74782 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 63.565 4.6479 9430100 0 0 0 0 0 0 0 9430100 0 0 0 0 0 0 0 29877 4773 27302 251061 199421 199421 1 LISLPLSR Unmodified 897.56475 0.56475231 4600 Q9NRG0 CHRAC1 Chromatin accessibility complex protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.485 74.55 2 0.0093409 86152 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 83.206 25.925 277060000 0 0 0 14911000 14863000 23546000 19265000 12989000 14169000 25254000 33161000 37793000 23043000 23348000 34720000 29878 4600 27303 251062;251063;251064;251065;251066;251067;251068;251069;251070;251071;251072;251073 199422;199423;199424;199425;199426;199427;199428;199429;199430;199431;199432;199433 199433 12 LISLPTSK Unmodified 857.52222 0.52221879 1739 P54278 PMS2 Mismatch repair endonuclease PMS2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.4 3.2 3 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 53.665 52.844 2 0.027071 71303 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.77 17.971 545070000 57698000 96623000 0 16691000 14974000 45562000 22128000 19718000 21394000 30331000 52338000 68601000 31970000 25154000 41893000 29879 1739 27304 251074;251075;251076;251077;251078;251079;251080;251081;251082;251083;251084;251085;251086;251087;251088 199434;199435;199436;199437;199438 199436 5 LISLTDENALSGNEELTVK Unmodified 2045.0528 0.052830017 1002 P14625 HSP90B1 Endoplasmin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 2 1 1 1 1 84.148 80.525 2 6.1042E-65 100118 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145.49 125.03 35900000 1493200 31328000 3078800 0 0 0 0 0 0 0 0 0 0 0 0 29880 1002 27305 251089;251090;251091 199439;199440;199441 199440 3 LISPLASPADGVK Unmodified 1266.7184 0.71835242 3601 Q8WYP5 AHCTF1 Protein ELYS yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.57 66.655 2 0.00094061 76902 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 67.726 27.724 82346000 0 0 0 3680200 5052600 5961800 5512900 4886000 5310500 6980200 8544600 10551000 5145200 8473600 12248000 29881 3601 27306 251092;251093;251094;251095;251096;251097;251098;251099;251100;251101;251102;251103 199442;199443;199444;199445;199446;199447;199448;199449;199450;199451;199452;199453 199453 12 LISPQDCTK Unmodified 1060.5223 0.52229515 1608 P49862 KLK7 Kallikrein-7 yes yes 0 0 0 By MS/MS 10 0 1 1 25.605 25.405 2 0.0052023 27348 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 80.438 54.499 81464000 0 0 0 81464000 0 0 0 0 0 0 0 0 0 0 0 29882 1608 27307 251104 199454;199455 199455 2 LISPQNLSVR Unmodified 1125.6506 0.6506072 3078 Q7Z333 SETX Probable helicase senataxin yes yes 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 60.596 60.646 2 0.0052216 69122 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 69.825 28.796 37783000 0 0 0 2319000 3133800 2847100 3164300 0 2780700 4785600 4032000 6472400 3581500 4667100 0 29883 3078 27308 251105;251106;251107;251108;251109;251110;251111;251112;251113;251114 199456;199457;199458;199459 199456 4 LISQDIHSNTYNYK Unmodified 1694.8264 0.82639932 3790 Q96D46 NMD3 60S ribosomal export protein NMD3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.8 2.86 3 17 1 1 1 1 2 2 1 1 2 2 1 1 1 1 2 44.627 43.837 2;3 7.2997E-13 48976 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 82.908 70.169 471030000 15514000 20858000 8246600 22431000 22360000 48973000 29100000 30532000 25328000 72862000 31137000 33470000 22103000 29464000 58652000 29884 3790 27309 251115;251116;251117;251118;251119;251120;251121;251122;251123;251124;251125;251126;251127;251128;251129;251130;251131;251132;251133;251134 199460;199461;199462;199463;199464;199465;199466;199467;199468;199469;199470;199471;199472;199473;199474;199475;199476;199477;199478;199479;199480 199462 18 LISQGTIEESMLK Unmodified 1447.7592 0.75923095 4402 Q9H4L7 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 74.588 74.115 2 1.6163E-07 84909 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.06 68.033 319320000 0 251340000 3056900 0 4090100 7189200 3602400 6308700 3737600 6510100 7368700 6766200 4866800 4820700 9659500 29885 4402 27310 251135;251136;251137;251138;251139;251140;251141;251142;251143;251144;251145;251146;251147 199481;199482;199483;199484;199485;199486;199487;199488 199483 7 LISQGTIEESMLK Oxidation (M) 1463.7541 0.75414558 4402 Q9H4L7 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.12 2.32 1 7 1 1 1 1 1 1 1 1 55.854 55.428 2 0.002402 64348 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 52.725 18.519 38890000 0 1994100 0 2541700 0 5885700 0 0 0 4378800 8586600 7407600 0 3872900 4223000 29886 4402 27310 251148;251149;251150;251151;251152;251153;251154;251155 199489;199490;199491 199491 5864 3 LISQIQPEVDRER Unmodified 1581.8475 0.84746911 4617 Q9NRZ9 HELLS Lymphoid-specific helicase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 48.462 48.57 3 1.9135E-13 54621 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 117.07 104.79 383880000 0 0 0 25269000 26853000 43298000 28864000 27888000 27428000 43400000 41116000 47755000 34158000 37850000 0 29887 4617 27311 251156;251157;251158;251159;251160;251161;251162;251163;251164;251165;251166 199492;199493;199494;199495;199496;199497;199498;199499;199500;199501;199502;199503;199504 199497 13 LISSDGHEFIVK Unmodified 1343.7085 0.70851601 2522 Q15369 TCEB1 Transcription elongation factor B polypeptide 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.15 3.73 12 5 29 5 8 4 2 2 3 3 2 2 2 2 3 2 3 3 58.219 56.452 2;3 1.0438E-09 69729 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 123.75 104.48 6399600000 334440000 1615800000 1999500000 125740000 101380000 170490000 148030000 132960000 99330000 182000000 251570000 326160000 185230000 242400000 484550000 29888 2522 27312 251167;251168;251169;251170;251171;251172;251173;251174;251175;251176;251177;251178;251179;251180;251181;251182;251183;251184;251185;251186;251187;251188;251189;251190;251191;251192;251193;251194;251195;251196;251197;251198;251199;251200;251201;251202;251203;251204;251205;251206;251207;251208;251209;251210;251211;251212 199505;199506;199507;199508;199509;199510;199511;199512;199513;199514;199515;199516;199517;199518;199519;199520;199521;199522;199523;199524;199525;199526;199527;199528;199529;199530;199531;199532;199533;199534 199516 22 LISSPTSFIDVGAR Unmodified 1461.7827 0.78274359 3183 Q86WG5 SBF2 Myotubularin-related protein 13 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 81.443 81.521 2 0.00048945 94304 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 69.01 34.289 16275000 0 0 0 0 1486500 0 3212400 2682500 0 4234400 4659200 0 0 0 0 29889 3183 27313 251213;251214;251215;251216;251217;251218;251219 199535;199536;199537;199538;199539 199538 5 LISSSQVDQETGFNRHEAK Unmodified 2145.0451 0.045059297 301 O43164 PJA2 E3 ubiquitin-protein ligase Praja-2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 42.016 42.256 4 0.00013812 46132 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.41 43.451 119080000 0 0 0 0 5204800 7191100 4351300 8666700 10240000 13455000 12755000 14415000 14925000 9597200 18280000 29890 301 27314 251220;251221;251222;251223;251224;251225;251226;251227;251228;251229;251230 199540;199541;199542;199543;199544 199540 5 LISSTESELQQSYAK Unmodified 1682.8363 0.8362953 297 O43149 ZZEF1 Zinc finger ZZ-type and EF-hand domain-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 58.904 53.061 2 1.0943E-50 68185 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 166.14 146.15 89102000 0 89102000 0 0 0 0 0 0 0 0 0 0 0 0 0 29891 297 27315 251231 199545 199545 1 LISTLIYK Unmodified 949.58482 0.58481905 237 O14980 XPO1 Exportin-1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68.072 67.329 2 0.013906 75959 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.342 71.342 352810000 31520000 0 4437200 12360000 14311000 35074000 17913000 20109000 12514000 34124000 26428000 28740000 19550000 27642000 68091000 29892 237 27316 251232;251233;251234;251235;251236;251237;251238;251239;251240;251241;251242;251243;251244;251245 199546;199547;199548;199549;199550;199551 199549 4 LISTMPGIHLSPEQQQQQLQSLR Oxidation (M) 2647.3752 0.37518398 4694 Q9NWA0 MED9 Mediator of RNA polymerase II transcription subunit 9 yes yes 0 1 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 74.742 74.947 3 1.8927E-06 86036 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.827 44.568 21069000 0 0 0 0 0 0 0 4943900 0 0 0 0 2722200 0 13403000 29893 4694 27317 251246;251247;251248 199552 199552 6097 1 LISVETDIVVDHYK Unmodified 1629.8614 0.86138784 2210 Q12931 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 80.32 74.355 3 0.00033929 75697 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 67.275 55.802 69460000 69460000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29894 2210 27318 251249;251250 199553;199554 199553 2 LISWYDNEFGYSNR Unmodified 1762.7951 0.79509919 782 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.16 2.46 2 17 1 1 2 1 1 1 1 1 1 2 2 1 2 2 82.005 82.058 2;3 0.00037832 95166 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 88.441 82.44 816060000 865670 424760 0 16775000 3650300 10230000 2480000 8878600 4789200 9894400 66365000 50056000 3215200 46817000 591620000 29895 782 27319 251251;251252;251253;251254;251255;251256;251257;251258;251259;251260;251261;251262;251263;251264;251265;251266;251267;251268;251269 199555;199556;199557;199558;199559;199560;199561;199562;199563;199564 199563 5 LISYSYMVR Unmodified 1130.5794 0.57941609 834 P07099 EPHX1 Epoxide hydrolase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 67.425 67.571 2 0.036457 77531 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 45.68 20.757 46999000 0 0 0 0 2967700 4233700 2432100 5974300 2614600 4909500 6221000 7895900 0 0 9750500 29896 834 27320 251270;251271;251272;251273;251274;251275;251276;251277;251278 199565;199566;199567 199565 3 LITAADTTAEQR Unmodified 1288.6623 0.6622941 4550 Q9NPF5 DMAP1 DNA methyltransferase 1-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.323 32.509 2 2.5941E-07 34492 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 117.71 96.918 551990000 0 0 0 34444000 35268000 39792000 52791000 35490000 34277000 52727000 66938000 65654000 47955000 32365000 54291000 29897 4550 27321 251279;251280;251281;251282;251283;251284;251285;251286;251287;251288;251289;251290 199568;199569;199570;199571;199572 199570 3 LITAADTTAEQRR Unmodified 1444.7634 0.76340513 4550 Q9NPF5 DMAP1 DNA methyltransferase 1-associated protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 27.27 27.504 3 0.0024071 29020 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 33.685 22.581 103550000 0 0 0 6510900 6983300 0 0 9062200 8295600 12169000 15559000 14237000 11559000 7013400 12162000 29898 4550 27322 251291;251292;251293;251294;251295;251296;251297;251298;251299;251300 199573;199574;199575;199576;199577 199577 5 LITAANFCQNGK Unmodified 1335.6605 0.66051996 2734 Q5JSH3 WDR44 WD repeat-containing protein 44 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 57.604 51.299 2 9.6728E-25 69217 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 214.12 189.35 177720000 108310000 69405000 0 0 0 0 0 0 0 0 0 0 0 0 0 29899 2734 27323 251301;251302;251303 199578;199579;199580 199580 3 LITAIYADYAR Unmodified 1268.6765 0.6764876 4266 Q9BZH6 WDR11 WD repeat-containing protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 75.099 75.18 2 0.0016512 86760 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 71.349 46.426 28584000 0 0 0 0 2093400 4149700 2128000 0 0 5437700 0 4301000 0 3452700 7021600 29900 4266 27324 251304;251305;251306;251307;251308;251309;251310 199581;199582;199583;199584;199585 199582 5 LITALGSSEVQPQFTR Unmodified 1745.9312 0.93119874 4998 Q9ULK4 MED23 Mediator of RNA polymerase II transcription subunit 23 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 76.569 76.601 2 2.2265E-23 88513 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 119.76 94.909 45051000 0 0 0 1841600 3000100 3773600 2078600 5438200 0 7503200 3394800 0 3757400 5376100 8887500 29901 4998 27325 251311;251312;251313;251314;251315;251316;251317;251318;251319;251320 199586;199587;199588;199589;199590;199591;199592;199593;199594 199594 8 LITASETGEQLISR Unmodified 1516.8097 0.80968662 3745 Q96AY4 TTC28 Tetratricopeptide repeat protein 28 yes yes 0 0 0 By MS/MS 10 0 1 1 64.874 64.839 2 0.0020136 74390 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 70.977 44.858 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29902 3745 27326 251321 199595 199595 1 LITAVVMK Unmodified 873.53576 0.53576037 614 O94979 SEC31A Protein transport protein Sec31A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 58.452 58.528 2 0.020537 66863 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 62.717 18.186 55055000 0 0 0 3598200 2604600 4593000 4031800 4123900 2145100 5905200 4799300 0 4662100 5899800 12692000 29903 614 27327 251322;251323;251324;251325;251326;251327;251328;251329;251330;251331;251332 199596;199597;199598 199597 3 LITAVVMK Oxidation (M) 889.53067 0.53067499 614 O94979 SEC31A Protein transport protein Sec31A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 42.57 42.757 2 0.031415 47488 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 47.743 25.121 79237000 0 0 0 7021600 4031200 0 6164800 5876300 5301000 8023400 9769200 9438400 9305600 6368600 7936900 29904 614 27327 251333;251334;251335;251336;251337;251338;251339;251340;251341;251342;251343 199599;199600;199601 199599 3 LITAYQR Unmodified 863.4865 0.48650199 4814;2670 Q9P2D1;Q3L8U1 CHD7;CHD9 Chromodomain-helicase-DNA-binding protein 7;Chromodomain-helicase-DNA-binding protein 9 no no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.264 30.456 2 0.040879 33122 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 68.398 20.225 149210000 0 0 0 7875000 9506000 8573300 9575000 13609000 7592800 13006000 12898000 20300000 12508000 12649000 21122000 29905 4814;2670 27328 251344;251345;251346;251347;251348;251349;251350;251351;251352;251353;251354;251355 199602 199602 1 LITDEFVK Unmodified 963.5277 0.5276981 5031 Q9UNF1;Q12816 MAGED2;TRO Melanoma-associated antigen D2;Trophinin yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.18 3.29 3 1 13 1 2 1 1 1 1 1 1 1 1 1 2 1 1 1 65.604 64.37 2 0.0062194 74184 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 102.72 41.758 3256200000 59679000 1437400000 52977000 78206000 84093000 155740000 104500000 110980000 115280000 187790000 175540000 181530000 161320000 129390000 221750000 29906 5031 27329 251356;251357;251358;251359;251360;251361;251362;251363;251364;251365;251366;251367;251368;251369;251370;251371;251372 199603;199604;199605;199606;199607;199608;199609;199610;199611;199612;199613;199614;199615;199616;199617;199618;199619;199620;199621;199622;199623;199624 199621 22 LITDLQDQNQK Unmodified 1314.6779 0.67794416 1328 P33176 KIF5B Kinesin-1 heavy chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 40.196 39.058 2 8.4819E-29 42560 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 206.78 155.59 1448800000 15135000 529230000 2622000 51115000 65526000 71021000 68434000 57908000 68183000 80183000 94682000 81425000 78524000 67354000 117420000 29907 1328 27330 251373;251374;251375;251376;251377;251378;251379;251380;251381;251382;251383;251384;251385;251386;251387;251388 199625;199626;199627;199628;199629;199630;199631;199632;199633;199634;199635;199636;199637;199638;199639;199640;199641 199630 17 LITDTDSFLHDAGLR Unmodified 1672.842 0.84204938 5191 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 yes yes 0 0 0 By matching By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 80.344 80.499 3 0.00023263 92770 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.378 54.867 11918000 0 0 0 0 0 2177700 1222700 1561500 1785300 0 0 0 0 0 5171100 29908 5191 27331 251389;251390;251391;251392;251393 199642 199642 1 LITDTESVEINALK Unmodified 1544.8298 0.82975336 5370 yes yes 0 0 0 By MS/MS By MS/MS 10 0 3 1 2 63.15 63.598 3 0.01695 71964 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 27.005 6.2722 + 51104000 0 0 0 0 0 0 0 0 0 0 0 0 0 7290300 43814000 29909 5370 27332 251394;251395;251396 199643 199643 1 LITEDVQGK Unmodified 1001.5393 0.53932542 1842 P61247 RPS3A 40S ribosomal protein S3a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.55 3.76 2 3 1 14 2 3 1 1 1 1 2 1 1 1 1 1 1 2 1 38.859 38.359 2 0.001226 40276 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 138.83 78.033 6485200000 138720000 4181700000 11623000 99900000 138120000 146330000 130330000 128120000 114740000 189710000 195680000 256340000 262190000 226490000 265310000 29910 1842 27333 251397;251398;251399;251400;251401;251402;251403;251404;251405;251406;251407;251408;251409;251410;251411;251412;251413;251414;251415;251416 199644;199645;199646;199647;199648;199649;199650;199651;199652;199653;199654;199655;199656;199657;199658;199659;199660;199661;199662;199663;199664 199655 16 LITEGASK Unmodified 817.45453 0.45453316 1615 P50213 IDH3A Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 14.293 13.742 2 0.0082674 12589 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.794 17.362 170810000 0 127830000 0 3434400 1938900 0 4560100 4289500 0 4812900 4648100 8872800 0 0 10420000 29911 1615 27334 251417;251418;251419;251420;251421;251422;251423;251424;251425;251426 199665;199666;199667;199668;199669;199670 199668 5 LITEPAEIMA Unmodified 1086.5631 0.56309733 1408 P40123 CAP2 Adenylyl cyclase-associated protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.58 3.17 1 1 10 1 1 1 1 1 1 1 1 1 1 1 1 81.853 82.019 1;2 0.0055918 91232 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 85.265 85.265 102450000 48144000 14623000 0 0 0 3341800 1042300 1614700 785880 2560800 5949200 3900800 3306600 5009800 12174000 29912 1408 27335 251427;251428;251429;251430;251431;251432;251433;251434;251435;251436;251437;251438 199671;199672;199673 199673 3 LITEPAEIMA Oxidation (M) 1102.558 0.55801195 1408 P40123 CAP2 Adenylyl cyclase-associated protein 2 yes yes 0 1 0 By MS/MS 1 0 1 1 104.48 109.74 2 8.0692E-06 90004 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 131.04 112.31 50664000 50664000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29913 1408 27335 251439 199674 199674 2203 1 LITEQELPER Unmodified 1226.6507 0.65066678 2993 Q6XZF7 DNMBP Dynamin-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 50.007 50.077 2 0.00039151 56505 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 138.11 108.3 138880000 0 0 0 10399000 11264000 0 11981000 15193000 12220000 18108000 0 0 19875000 15184000 24650000 29914 2993 27336 251440;251441;251442;251443;251444;251445;251446;251447;251448;251449 199675;199676;199677;199678;199679;199680;199681;199682;199683;199684 199675 10 LITGDFK Unmodified 792.43815 0.43815481 299 O43156 TTI1 TELO2-interacting protein 1 homolog yes yes 0 0 0 By MS/MS 10 0 1 1 28.187 28.341 2 0.044016 30227 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 66.994 0 989280000 0 0 0 0 0 0 0 0 0 989280000 0 0 0 0 0 29915 299 27337 251450 199685 199685 1 LITGIIYPQNK Unmodified 1258.7285 0.72852317 5295 Q9Y6W3 CAPN7 Calpain-7 yes yes 0 0 0 By MS/MS 2 0 1 1 77.646 69.516 2 0.00046403 91502 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 102.51 80.986 7136600 7136600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29916 5295 27338 251451 199686 199686 1 LITLEEEMTK Oxidation (M) 1221.6163 0.61625511 838 P07237 P4HB Protein disulfide-isomerase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 50.048 48.744 2 1.0415E-05 62501 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 133.57 102.5 779650000 12863000 205840000 12724000 17360000 15272000 34552000 17001000 17461000 14438000 43818000 79788000 92516000 24331000 44620000 147070000 29917 838 27339 251452;251453;251454;251455;251456;251457;251458;251459;251460;251461;251462;251463;251464;251465;251466;251467 199687;199688;199689;199690;199691;199692;199693;199694;199695;199696;199697;199698;199699;199700;199701;199702;199703;199704 199690 1024 17 LITLEEEMTK Unmodified 1205.6213 0.62134049 838 P07237 P4HB Protein disulfide-isomerase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 67.724 67.363 2 0.00076823 77123 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 120.12 66.949 894990000 0 450930000 0 8100600 11707000 12589000 11399000 20382000 12518000 21594000 71449000 56340000 0 43063000 174920000 29918 838 27339 251468;251469;251470;251471;251472;251473;251474;251475;251476;251477;251478;251479 199705;199706;199707;199708;199709;199710;199711;199712;199713;199714;199715;199716;199717;199718 199714 14 LITLEQGK Unmodified 900.52803 0.52803245 2073 Q02252 ALDH6A1 Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 43.989 38.769 2 0.046782 50447 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.662 31.948 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29919 2073 27340 251480 199719 199719 1 LITLSVQDAPTK Unmodified 1284.7289 0.7289171 3602 Q8WYQ5 DGCR8 Microprocessor complex subunit DGCR8 yes yes 0 0 0 By MS/MS 2 0 1 1 72.791 67.246 2 0.011858 85036 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 61.958 36.821 20694000 0 20694000 0 0 0 0 0 0 0 0 0 0 0 0 0 29920 3602 27341 251481 199720 199720 1 LITNQGR Unmodified 800.45045 0.45045083 2867 Q6BDS2 UHRF1BP1 UHRF1-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 11.384 11.532 2 0.023406 10441 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 86.838 45.716 104750000 0 0 0 4596200 6879600 4973400 7934700 13157000 5783900 9249300 4999200 12246000 13244000 9895600 11790000 29921 2867 27342 251482;251483;251484;251485;251486;251487;251488;251489;251490;251491;251492;251493 199721;199722;199723;199724;199725 199725 5 LITPAEK Unmodified 770.4538 0.45380487 2822 Q5VW32 BROX BRO1 domain-containing protein BROX yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 25.516 21.967 2 0.027727 27879 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 97.068 52.375 44450000 0 29809000 14641000 0 0 0 0 0 0 0 0 0 0 0 0 29922 2822 27343 251494;251495 199726;199727 199727 2 LITPAVVSER Unmodified 1083.6288 0.62880913 1917 P62851 RPS25 40S ribosomal protein S25 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 57.909 58.027 2 0.00055162 66995 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 128.36 63.109 2103900000 0 0 0 109010000 114890000 149370000 107170000 108170000 120270000 189940000 187320000 273830000 232440000 196110000 315340000 29923 1917 27344 251496;251497;251498;251499;251500;251501;251502;251503;251504;251505;251506;251507 199728;199729;199730;199731;199732;199733;199734;199735;199736;199737;199738;199739;199740 199739 13 LITPAVVSERLK Unmodified 1324.8078 0.80783613 1917 P62851 RPS25 40S ribosomal protein S25 yes yes 0 0 1 By MS/MS 2 0 1 1 78.382 70.251 3 0.0059308 92251 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.875 35.985 113550000 113550000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29924 1917 27345 251508 199741 199741 1 LITPQVAK Unmodified 868.5382 0.53820321 3133 Q86TB9 PATL1 Protein PAT1 homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.57 39.749 2 0.011804 44220 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 114.19 51.471 889170000 0 0 0 47381000 59035000 68408000 72412000 71008000 56107000 78364000 93037000 116290000 66406000 70455000 90265000 29925 3133 27346 251509;251510;251511;251512;251513;251514;251515;251516;251517;251518;251519;251520 199742;199743;199744;199745;199746;199747;199748;199749;199750;199751;199752;199753 199748 1 LITQTFSHHNQLAQK Unmodified 1764.9271 0.92711641 5087 Q9Y266 NUDC Nuclear migration protein nudC yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.5 1.94 2 30 2 2 2 3 3 2 2 2 3 3 2 3 3 40.091 39.805 2;3;4 1.452E-27 43776 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 136.3 127.26 2271700000 266790000 0 0 80580000 42134000 294130000 115500000 107400000 69889000 114940000 246100000 214940000 112080000 145790000 461390000 29926 5087 27347 251521;251522;251523;251524;251525;251526;251527;251528;251529;251530;251531;251532;251533;251534;251535;251536;251537;251538;251539;251540;251541;251542;251543;251544;251545;251546;251547;251548;251549;251550;251551;251552 199754;199755;199756;199757;199758;199759;199760;199761;199762;199763;199764;199765;199766;199767 199762 12 LITREYQTIEDK Unmodified 1507.7882 0.7882229 92 CON__Q3SZR3 yes yes 0 0 1 By MS/MS 2 0 1 1 50.327 42.427 3 0.016786 58728 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.897 0 + 9343700 9343700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29927 92 27348 251553 199768 199768 1 LITSEEERSPAK Unmodified 1358.7042 0.70415892 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.17 3.85 4 2 6 1 4 1 1 1 1 1 1 1 22.733 20.83 2;3 0.00011901 25986 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 117.25 91.208 281000000 10212000 86511000 34800000 0 7473200 0 0 10514000 0 0 0 27543000 20290000 31290000 52361000 29928 2203 27349 251554;251555;251556;251557;251558;251559;251560;251561;251562;251563;251564;251565 199769;199770;199771;199772;199773;199774;199775;199776;199777;199778;199779;199780;199781 199774 10 LITSNTDASDGDSVALVK Unmodified 1804.9054 0.9054375 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 60.906 60.548 2 2.3739E-82 75511 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 193.23 137.77 172350000 0 36552000 0 7410100 7234000 7928800 11525000 8696100 7191800 12692000 15213000 14005000 13888000 9986600 20026000 29929 2446 27350 251566;251567;251568;251569;251570;251571;251572;251573;251574;251575;251576;251577;251578 199782;199783;199784;199785;199786;199787;199788;199789;199790;199791;199792;199793;199794;199795 199785 14 LITSVADVVNNDPMVGSK Oxidation (M) 1873.9455 0.94552817 828 P06737 PYGL Glycogen phosphorylase, liver form yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 77.575 73.449 2 1.1251E-47 91525 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 139.28 132.23 77873000 0 77873000 0 0 0 0 0 0 0 0 0 0 0 0 0 29930 828 27351 251579;251580 199796;199797 199796 1001 2 LITSVADVVNNDPMVGSK Unmodified 1857.9506 0.95061355 828 P06737 PYGL Glycogen phosphorylase, liver form yes yes 0 0 0 By MS/MS 2 0 1 1 84.586 79.842 2 1.1578E-13 99213 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 147.52 140.47 155600000 0 155600000 0 0 0 0 0 0 0 0 0 0 0 0 0 29931 828 27351 251581 199798 199798 1 LITTLVK Unmodified 786.52149 0.52149051 2756 Q5SRE5 NUP188 Nucleoporin NUP188 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.677 51.826 2 0.028147 57169 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.847 11.043 122670000 0 0 0 7126800 8992100 11116000 7334300 17964000 4444600 10462000 8550600 14908000 10787000 10645000 10336000 29932 2756 27352 251582;251583;251584;251585;251586;251587;251588;251589;251590;251591;251592;251593 199799;199800;199801 199799 3 LIVALMK Unmodified 786.50373 0.50373196 873 P08758 ANXA5 Annexin A5 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 76.639 71.097 2 0.035805 87360 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 84.025 0 455130000 373040000 0 82093000 0 0 0 0 0 0 0 0 0 0 0 0 29933 873 27353 251594;251595 199802 199802 1 LIVAPDADAR Unmodified 1039.5662 0.56620887 3430 Q8NEW0 SLC30A7 Zinc transporter 7 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 43.895 44.151 2 0.0095404 49401 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 57.59 31.853 20464000 0 0 0 0 0 0 0 10960000 0 0 0 0 9503300 0 0 29934 3430 27354 251596;251597 199803 199803 1 LIVAYVDDLDR Unmodified 1290.682 0.68196691 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.238 79.344 2 1.9544E-05 90814 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 127.4 115.55 280100000 0 0 0 0 13985000 20576000 18895000 23869000 23198000 31157000 23553000 51886000 20299000 21957000 30729000 29935 213 27355 251598;251599;251600;251601;251602;251603;251604;251605;251606;251607;251608 199804;199805;199806;199807;199808;199809;199810;199811;199812;199813;199814 199810 9 LIVAYVDDLDRR Unmodified 1446.7831 0.78307794 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.247 74.307 3 4.5177E-07 84923 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 115.33 92.101 523630000 0 0 0 17966000 15067000 38792000 24204000 49837000 48255000 44428000 34318000 76048000 31663000 41412000 101640000 29936 213 27356 251609;251610;251611;251612;251613;251614;251615;251616;251617;251618;251619;251620 199815;199816;199817;199818;199819;199820;199821;199822;199823;199824;199825;199826;199827;199828 199818 11 LIVDEAINEDNSVVSLSQPK Unmodified 2169.1165 0.11649291 1755 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.56 1 1 13 2 2 1 2 2 2 2 2 81.812 81.338 2;3 1.8459E-63 93978 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 190.24 179.89 181710000 0 25942000 0 3791200 0 0 0 0 2278900 36267000 25156000 15016000 0 12666000 60589000 29937 1755 27357 251621;251622;251623;251624;251625;251626;251627;251628;251629;251630;251631;251632;251633;251634;251635 199829;199830;199831;199832;199833;199834;199835;199836;199837;199838 199831 10 LIVDGRGK Unmodified 856.51305 0.51305109 4065 Q99832 CCT7 T-complex protein 1 subunit eta yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 20.745 17.035 2 0.039306 24706 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 111.28 27.664 2245700000 2028200000 0 217550000 0 0 0 0 0 0 0 0 0 0 0 0 29938 4065 27358 251636;251637 199839 199839 0 LIVDHNIADYMTAK Unmodified 1602.8076 0.80757813 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 75.412 75.503 3 0.00019829 86632 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.894 44.289 44183000 0 0 0 1538900 0 4005000 0 4796000 4438500 3089800 4987000 4974100 3020500 3498800 9834100 29939 2930 27359 251638;251639;251640;251641;251642;251643;251644;251645;251646;251647 199840;199841;199842;199843 199840 4 LIVDPALDPALR Unmodified 1291.75 0.7499869 245 O15047 SETD1A Histone-lysine N-methyltransferase SETD1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.69 81.752 2 0.00036314 93763 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 81.338 60.436 93369000 0 0 0 2940700 5464800 9077700 5460300 7089700 5133800 10657000 10622000 11209000 6045800 6853700 12814000 29940 245 27360 251648;251649;251650;251651;251652;251653;251654;251655;251656;251657;251658;251659 199844;199845;199846;199847;199848;199849;199850;199851 199849 8 LIVDPALDPALRRPSQK Unmodified 1888.0894 0.089430715 245 O15047 SETD1A Histone-lysine N-methyltransferase SETD1A yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 67.906 68.177 4 0.0077005 77864 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 36.638 26.98 43793000 0 0 0 0 0 0 0 5894000 5743500 0 4347200 6348000 5282200 3855200 12323000 29941 245 27361 251660;251661;251662;251663;251664;251665;251666 199852;199853 199853 2 LIVDSVK Unmodified 772.46945 0.46945494 382 O60216 RAD21 Double-strand-break repair protein rad21 homolog yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.335 38.514 2 0.050331 42874 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 62.717 12.178 325960000 0 0 0 14487000 14941000 28951000 23816000 18708000 17460000 38730000 38472000 46538000 22704000 24216000 36932000 29942 382 27362 251667;251668;251669;251670;251671;251672;251673;251674;251675;251676;251677;251678 199854;199855 199854 2 LIVDVIR Unmodified 826.52764 0.52763852 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.024 69.105 2 0.032282 78199 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.039 8.2624 225730000 0 0 0 17950000 14546000 23520000 15552000 10203000 13900000 23573000 20949000 30285000 17592000 13236000 24429000 29943 1518 27363 251679;251680;251681;251682;251683;251684;251685;251686;251687;251688;251689;251690 199856 199856 1 LIVENLSSR Unmodified 1029.5819 0.58185893 2260;2149;2259 Q08170;Q13247;Q13243 SRSF4;SRSF6;SRSF5 Serine/arginine-rich splicing factor 4;Serine/arginine-rich splicing factor 6;Serine/arginine-rich splicing factor 5 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.263 51.412 2 0.0016348 56844 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 141.39 85.713 759060000 0 0 0 38821000 40670000 48816000 44393000 47362000 44275000 75877000 96264000 92906000 62204000 55021000 112450000 29944 2149;2260;2259 27364 251691;251692;251693;251694;251695;251696;251697;251698;251699;251700;251701;251702 199857;199858;199859;199860;199861;199862;199863;199864;199865;199866;199867;199868;199869;199870 199861 13 LIVEPPLPQEK Unmodified 1261.7282 0.72818882 2434 Q14687 GSE1 Genetic suppressor element 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.62 72.689 2 0.0014117 83351 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 72.928 51.628 76305000 0 0 0 4369600 4450600 4688300 5996500 6235000 4357700 7928200 6868300 9558200 7537200 6569900 7745500 29945 2434 27365 251703;251704;251705;251706;251707;251708;251709;251710;251711;251712;251713;251714 199871;199872;199873;199874;199875;199876;199877;199878;199879;199880;199881;199882 199873 12 LIVGTAGR Unmodified 785.47594 0.4759373 355 O43684 BUB3 Mitotic checkpoint protein BUB3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.137 29.329 2 0.0064516 31241 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 100.75 18.492 515990000 0 0 0 23361000 22600000 22172000 41124000 37026000 22566000 46573000 49263000 43646000 35760000 53056000 118840000 29946 355 27366 251715;251716;251717;251718;251719;251720;251721;251722;251723;251724;251725;251726 199883;199884;199885;199886;199887;199888;199889;199890;199891 199890 4 LIVGTAGRR Unmodified 941.57705 0.57704833 355 O43684 BUB3 Mitotic checkpoint protein BUB3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 20.263 20.715 2 0.041725 21128 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 82.716 20.001 132280000 0 0 0 0 0 0 0 14261000 0 0 25887000 30175000 19228000 0 42725000 29947 355 27367 251727;251728;251729;251730;251731 199892;199893 199893 0 LIVNVNDLR Unmodified 1054.6135 0.61349341 1183 P25205 MCM3 DNA replication licensing factor MCM3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.019 72.088 2 0.0030483 82985 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 91.318 35.877 386040000 0 0 0 14315000 13784000 35600000 22035000 19661000 17926000 32190000 44632000 49788000 22693000 33164000 80250000 29948 1183 27368 251732;251733;251734;251735;251736;251737;251738;251739;251740;251741;251742;251743 199894;199895;199896;199897;199898;199899;199900;199901;199902;199903;199904;199905 199894 12 LIVPFCGHIK Unmodified 1182.6583 0.65833512 2679 Q3ZCW2 LGALSL Galectin-related protein yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS 10 0 5 1 1 1 1 1 71.4 71.448 3 0.016484 82689 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 36.334 31.393 20550000 0 0 0 4089500 0 3445800 0 0 0 0 1913300 0 0 1139100 9962800 29949 2679 27369 251744;251745;251746;251747;251748 199906 199906 1 LIVPVLLDAAVPAYDK Unmodified 1695.9811 0.98110904 2587 Q15833 STXBP2 Syntaxin-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.12 3.79 4 1 3 3 2 1 1 1 97.727 95.58 2;3 0.00023343 111757 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.363 87.363 68235000 0 51066000 5798300 0 0 0 0 0 0 3622800 2248700 0 0 0 5499000 29950 2587 27370 251749;251750;251751;251752;251753;251754;251755;251756 199907;199908;199909;199910;199911;199912 199908 6 LIVQSPIDPK Unmodified 1108.6492 0.64921022 4711 Q9NX01 TXNL4B Thioredoxin-like protein 4B yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 68.533 63.256 2 0.015829 80629 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.993 49.262 152630000 0 152630000 0 0 0 0 0 0 0 0 0 0 0 0 0 29951 4711 27371 251757;251758 199913 199913 1 LIVREVAHEEK Unmodified 1321.7354 0.73539946 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 0 1 By MS/MS 2 0 1 1 35.302 28.954 3 0.00011375 40641 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.623 54.989 25637000 25637000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29952 2193 27372 251759 199914;199915 199915 2 LIVSQLK Unmodified 799.51674 0.51673948 4236 Q9BXW9 FANCD2 Fanconi anemia group D2 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 46.392 46.721 2 0.023411 51156 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.906 8.292 57795000 0 0 0 0 0 9686600 5020400 4637200 0 6406300 5579000 7992800 6754700 4103000 7615100 29953 4236 27373 251760;251761;251762;251763;251764;251765;251766;251767;251768 199916;199917;199918;199919;199920;199921 199919 6 LIVTGTSIQR Unmodified 1086.6397 0.63970816 4693 Q9NW82 WDR70 WD repeat-containing protein 70 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.09 49.248 2 0.00164 55896 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 94.114 50.991 407560000 0 0 0 23455000 22049000 18247000 32723000 29808000 23120000 42982000 45322000 45467000 29172000 31116000 64104000 29954 4693 27374 251769;251770;251771;251772;251773;251774;251775;251776;251777;251778;251779;251780 199922;199923;199924;199925;199926;199927;199928;199929;199930;199931;199932;199933;199934 199923 13 LIVTQTMK Oxidation (M) 948.5314 0.53140327 63 CON__P02754 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 25.454 25.618 2 0.0033763 27146 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 129.68 60.896 + 382190000 0 0 0 52817000 0 45160000 169530000 47868000 19023000 0 0 28512000 19279000 0 0 29955 63 27375 251781;251782;251783;251784;251785;251786;251787 199935;199936;199937;199938;199939;199940 199938 70 4 LIVTQTMK Unmodified 932.53649 0.53648865 63 CON__P02754 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 40.673 40.737 2 0.011282 46141 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 77.282 30.912 + 245920000 0 0 0 9758600 11169000 24344000 152710000 12030000 4274000 6151000 14172000 0 6918400 4394700 0 29956 63 27375 251788;251789;251790;251791;251792;251793;251794;251795;251796;251797 199941;199942 199942 2 LIVTSATLDAVK Unmodified 1229.7231 0.72310344 2414 Q14562 DHX8 ATP-dependent RNA helicase DHX8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 2 1 1 1 1 1 1 1 73.205 72.453 2 0.00094841 90839 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.108 40.69 128650000 0 56191000 2680200 0 6430200 0 11982000 0 4827300 8785300 7872500 9762700 6700000 4585800 8829100 29957 2414 27376 251798;251799;251800;251801;251802;251803;251804;251805;251806;251807;251808;251809;251810;251811 199943;199944;199945;199946;199947;199948;199949;199950 199945 8 LIVTSATMDAEK Unmodified 1277.6537 0.65370325 3642 Q92620 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.23 3.24 2 1 10 1 2 1 1 1 1 1 1 1 1 1 1 53.197 51.583 2 2.9195E-05 65630 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.2 84.866 138340000 7989500 81179000 0 3367000 0 6747800 4311400 0 2749200 7914200 6564300 0 0 6859300 10656000 29958 3642 27377 251812;251813;251814;251815;251816;251817;251818;251819;251820;251821;251822;251823;251824 199951;199952;199953;199954;199955;199956;199957;199958;199959;199960 199954 10 LIVTSATMDAEK Oxidation (M) 1293.6486 0.64861787 3642 Q92620 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 39.667 39.771 2 0.0042815 44717 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 51.268 37.149 23293000 0 0 0 0 2701500 3960300 4511600 0 0 5695400 0 6423900 0 0 0 29959 3642 27377 251825;251826;251827;251828;251829;251830;251831 199961;199962;199963;199964;199965;199966 199966 5162 6 LIVYPPPPAK Unmodified 1093.6536 0.65356732 4301 Q9GZR1 SENP6 Sentrin-specific protease 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 60.391 59.512 2 0.0070199 67913 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 63.48 44.697 44753000 0 25981000 0 0 0 3381100 0 0 0 0 4648700 4647500 0 0 6094700 29960 4301 27378 251832;251833;251834;251835;251836;251837;251838;251839 199967;199968;199969;199970;199971;199972;199973 199967 7 LIVYVMGGVAMSEMR Unmodified 1654.8245 0.82449052 2587 Q15833 STXBP2 Syntaxin-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 81.411 81.57 3 0.049526 94440 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 17.8 9.7565 32241000 0 0 0 0 0 0 0 2426300 2659900 5729100 2222800 2974600 2145800 0 14082000 29961 2587 27379 251840;251841;251842;251843;251844;251845;251846 199974 199974 1 LIWEISGGK Unmodified 1001.5546 0.55458155 464 O75152 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.43 2.06 1 13 1 1 1 1 1 1 1 1 1 1 1 1 2 72.074 72.17 2 0.005064 82877 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 84.743 43.441 128430000 0 0 0 5110100 6367900 8833000 7712500 12904000 7013000 7895100 9770000 12485000 9326600 9253000 31761000 29962 464 27380 251847;251848;251849;251850;251851;251852;251853;251854;251855;251856;251857;251858;251859;251860 199975;199976;199977;199978;199979;199980;199981;199982;199983;199984 199977 10 LIYKPHPQDPEK Unmodified 1463.7773 0.77726428 5148 Q9Y3B1 SLMO2 Protein slowmo homolog 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 27.046 27.198 3 0.00046932 28259 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 75.788 62.831 179220000 0 0 0 8330100 13467000 9938000 17696000 24659000 12218000 19419000 22494000 0 22224000 10606000 18166000 29963 5148 27381 251861;251862;251863;251864;251865;251866;251867;251868;251869;251870;251871 199985;199986;199987;199988;199989;199990;199991;199992;199993;199994;199995 199992 10 LIYQTLSWK Unmodified 1150.6386 0.63864553 662 O95453 PARN Poly(A)-specific ribonuclease PARN yes yes 0 0 0 By MS/MS 2 0 1 1 82.73 74.599 2 0.0067071 97622 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 103.74 57.313 12017000 12017000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29964 662 27382 251872 199996 199996 1 LIYQWVSR Unmodified 1063.5815 0.581465 4108 Q9BRG1 VPS25 Vacuolar protein-sorting-associated protein 25 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.18 70.255 2 0.010849 80663 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 78.324 67.632 96382000 0 0 0 4402200 2840100 11546000 6685000 9141400 7522800 7360100 7943100 10195000 6735100 5748900 16262000 29965 4108 27383 251873;251874;251875;251876;251877;251878;251879;251880;251881;251882;251883;251884 199997;199998;199999;200000;200001;200002;200003;200004;200005;200006 200002 10 LKDDEVAQLK Unmodified 1157.6292 0.62920306 836 P07195 LDHB L-lactate dehydrogenase B chain yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.22 3.88 1 14 7 23 8 11 3 2 2 1 2 2 2 2 2 2 2 2 2 35.531 33.796 2;3 6.3656E-28 95063 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 202.2 125.98 23592000000 2015000000 17936000000 658620000 38359000 55798000 31797000 67427000 56967000 37654000 48697000 540630000 420800000 79357000 477680000 1127600000 29966 836 27384 251885;251886;251887;251888;251889;251890;251891;251892;251893;251894;251895;251896;251897;251898;251899;251900;251901;251902;251903;251904;251905;251906;251907;251908;251909;251910;251911;251912;251913;251914;251915;251916;251917;251918;251919;251920;251921;251922;251923;251924;251925;251926;251927;251928;251929 200007;200008;200009;200010;200011;200012;200013;200014;200015;200016;200017;200018;200019;200020;200021;200022;200023;200024;200025;200026;200027;200028;200029;200030;200031;200032;200033;200034;200035;200036;200037;200038;200039 200028 21 LKDEDDEDDCFILEK Unmodified 1882.8142 0.81423923 28 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 67.168 60.062 3 0.00029185 79758 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.055 54.141 29700000 16366000 13334000 0 0 0 0 0 0 0 0 0 0 0 0 0 29967 28 27385 251930;251931 200040;200041 200041 2 LKDPANFQYPAESVLAYK Unmodified 2053.052 0.052042156 1023 P15559 NQO1 NAD(P)H dehydrogenase [quinone] 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 84.272 79.15 3 0.00044839 99943 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 39.983 36.489 106000000 57064000 33864000 15070000 0 0 0 0 0 0 0 0 0 0 0 0 29968 1023 27386 251932;251933;251934 200042;200043;200044 200042 3 LKEELEEARDIAR Unmodified 1570.8315 0.83148469 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 1 1 2 1 2 1 2 2 2 2 2 46.389 46.638 3;4 0.00012205 52687 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 109 80.67 442730000 0 0 0 6419400 8143400 9420100 18551000 22053000 17905000 25548000 54526000 88958000 49519000 41320000 100370000 29969 2102 27387 251935;251936;251937;251938;251939;251940;251941;251942;251943;251944;251945;251946;251947;251948;251949;251950;251951;251952;251953 200045;200046;200047;200048;200049;200050;200051;200052;200053;200054;200055;200056;200057;200058 200055 7 LKEEPDREAR Unmodified 1241.6364 0.6364137 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 0 2 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.7461 6.8697 3 0.0043505 3791 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 111.06 66.854 312690000 0 0 0 20139000 21173000 12316000 25179000 20896000 17129000 26502000 55484000 17712000 21677000 31696000 42793000 29970 1201 27388 251954;251955;251956;251957;251958;251959;251960;251961;251962;251963;251964;251965 200059;200060;200061;200062;200063;200064;200065;200066;200067;200068;200069 200066 11 LKGDDLQAIKK Unmodified 1227.7187 0.71868677 851 P07910 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.069 26.27 3 0.0038655 27171 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 97.163 61.621 312920000 0 0 0 20798000 18645000 10211000 29368000 13293000 10359000 15139000 24045000 53821000 33437000 37372000 46430000 29971 851 27389 251966;251967;251968;251969;251970;251971;251972;251973;251974;251975;251976;251977 200070;200071;200072;200073;200074;200075 200072 0 LKGEMMDLQHGSLFLR 2 Oxidation (M) 1905.9441 0.94408839 719 P00338 LDHA L-lactate dehydrogenase A chain yes yes 0 2 1 By MS/MS 10 0 1 1 58.525 59.119 3 0.0012491 66695 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.892 32.46 15857000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15857000 29972 719 27390 251978 200076 200076 861;862 1 LKPAHEGLVATVK Unmodified 1361.8031 0.8030851 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 33.581 33.228 3 0.004626 35786 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 38.511 28.999 281100000 51333000 0 0 8292800 7948900 17956000 19149000 14281000 17281000 23564000 23835000 25114000 25386000 19793000 27168000 29973 5262 27391 251979;251980;251981;251982;251983;251984;251985;251986;251987;251988;251989;251990;251991 200077;200078;200079;200080;200081;200082;200083;200084;200085;200086 200081 6 LKPDPNTLCDEFK Unmodified 1575.7603 0.76029359 65 CON__P02769 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.89 2.72 3 1 24 1 2 1 2 2 2 2 2 2 2 2 2 2 2 2 63.115 62.39 2;3 8.4939E-13 70829 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 125.03 120.23 + 1186200000 5630400 107670000 5377400 68807000 146300000 57107000 65810000 51084000 54972000 141230000 139950000 129050000 55149000 55038000 103050000 29974 65 27392 251992;251993;251994;251995;251996;251997;251998;251999;252000;252001;252002;252003;252004;252005;252006;252007;252008;252009;252010;252011;252012;252013;252014;252015;252016;252017;252018;252019 200087;200088;200089;200090;200091;200092;200093;200094;200095;200096;200097;200098;200099;200100;200101;200102;200103;200104 200093 16 LKPEGAPEPEGVAAPPPK Unmodified 1782.9516 0.95159983 276 O15357 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.64 43.814 3 0.0014881 48895 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 43.752 34.821 308350000 0 0 0 19786000 16249000 30373000 21937000 16229000 20671000 33242000 29966000 28224000 33122000 19434000 39118000 29975 276 27393 252020;252021;252022;252023;252024;252025;252026;252027;252028;252029;252030;252031 200105;200106;200107;200108;200109;200110;200111;200112;200113;200114 200108 10 LKPESSQQPGQDALAVK Unmodified 1794.9476 0.94757708 712 O96006 ZBED1 Zinc finger BED domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 39.085 38.319 3 0.00090569 47590 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 58.98 40.148 445030000 0 117870000 7621800 22578000 20568000 30698000 24403000 25019000 18911000 28907000 26487000 30957000 23741000 25878000 41387000 29976 712 27394 252032;252033;252034;252035;252036;252037;252038;252039;252040;252041;252042;252043;252044;252045;252046 200115;200116;200117;200118;200119;200120;200121 200118 5 LKPEYDIMCK Unmodified 1295.6254 0.62538001 4636 Q9NTK5 OLA1 Obg-like ATPase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.42 3.66 3 1 8 1 2 1 1 1 1 1 1 1 1 1 51.148 49.484 3 0.010981 62527 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 87.298 74.343 572970000 47343000 309720000 97712000 0 0 16933000 0 9040400 0 12852000 12971000 15202000 5975000 13118000 32099000 29977 4636 27395 252047;252048;252049;252050;252051;252052;252053;252054;252055;252056;252057;252058 200122;200123;200124;200125;200126 200126 4 LKPEYDIMCK Oxidation (M) 1311.6203 0.62029463 4636 Q9NTK5 OLA1 Obg-like ATPase 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 2 2 41.336 36.598 3 0.0040956 47952 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.332 59.418 318960000 23443000 191390000 104130000 0 0 0 0 0 0 0 0 0 0 0 0 29978 4636 27395 252059;252060;252061;252062;252063 200127;200128;200129;200130;200131 200127 6044 2 LKPGDLVGVNK Unmodified 1138.671 0.67100829 1066 P17980 PSMC3 26S protease regulatory subunit 6A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.43 3.14 5 1 24 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 48.53 47.501 2;3 0.0028062 65682 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.255 48.196 1972500000 396900000 53824000 42211000 92123000 113930000 124780000 56629000 45876000 35584000 209210000 246850000 310020000 53959000 60803000 129780000 29979 1066 27396 252064;252065;252066;252067;252068;252069;252070;252071;252072;252073;252074;252075;252076;252077;252078;252079;252080;252081;252082;252083;252084;252085;252086;252087;252088;252089;252090;252091;252092;252093 200132;200133;200134;200135;200136;200137;200138;200139;200140;200141;200142;200143;200144;200145;200146;200147;200148;200149;200150;200151;200152 200140 15 LKPGEIDPNPETK Unmodified 1436.7511 0.75110911 4010 Q99459 CDC5L Cell division cycle 5-like protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 21 1 2 2 2 2 2 2 2 2 1 1 2 35.895 36.094 2;3 0.0037672 38442 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.456 28.083 308040000 0 0 0 17027000 19223000 31625000 23690000 22041000 26053000 34161000 28744000 39713000 6646300 5442100 53669000 29980 4010 27397 252094;252095;252096;252097;252098;252099;252100;252101;252102;252103;252104;252105;252106;252107;252108;252109;252110;252111;252112;252113;252114 200153;200154;200155;200156;200157 200153 3 LKPGGVGAPSSSSPSPSPSAR Unmodified 1921.9858 0.9857535 3663 Q92797 SYMPK Symplekin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.821 34.004 3 6.6804E-21 37142 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 93.5 84.85 256310000 0 0 0 14838000 19154000 16511000 19732000 25977000 10655000 22083000 28644000 35504000 18717000 19035000 25459000 29981 3663 27398 252115;252116;252117;252118;252119;252120;252121;252122;252123;252124;252125;252126 200158;200159;200160;200161;200162;200163;200164;200165;200166;200167;200168 200160 11 LKPLPGETMEK Unmodified 1241.669 0.66895938 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.64 3.88 5 1 8 2 3 1 1 1 1 1 1 1 1 1 39.775 37.634 2;3 0.00030247 52333 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.734 83.925 1368600000 853110000 150100000 115160000 0 0 30426000 19042000 0 13486000 41907000 29772000 35076000 24756000 0 55789000 29982 5187 27399 252127;252128;252129;252130;252131;252132;252133;252134;252135;252136;252137;252138;252139;252140 200169;200170;200171;200172;200173;200174;200175;200176 200174 3 LKPLPGETMEK Oxidation (M) 1257.6639 0.663874 5187 Q9Y490 TLN1 Talin-1 yes yes 0 1 1 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.01 1 1 8 1 1 1 1 1 1 1 1 1 1 27.18 26.473 3 0.0029069 28349 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 73.666 57.089 301330000 0 56347000 93335000 16763000 11747000 30368000 21974000 13901000 11682000 28059000 0 0 0 0 17152000 29983 5187 27399 252141;252142;252143;252144;252145;252146;252147;252148;252149;252150 200177;200178;200179;200180;200181 200177 6563 1 LKPNLGNGADLPNYR Unmodified 1640.8635 0.86345352 5087 Q9Y266 NUDC Nuclear migration protein nudC yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 2 1 1 2 2 1 1 1 2 57.27 57.496 2;3 0.00011135 65083 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 70.529 60.995 477290000 0 0 0 0 12953000 59406000 25951000 4807900 0 57709000 68832000 52768000 37008000 39044000 118810000 29984 5087 27400 252151;252152;252153;252154;252155;252156;252157;252158;252159;252160;252161;252162;252163;252164 200182;200183;200184;200185;200186;200187;200188;200189;200190;200191;200192;200193;200194;200195 200193 13 LKPNTPFAATSSMGLETEEQEPSIIGK Oxidation (M) 2890.427 0.42700436 2150 Q08188 TGM3 Protein-glutamine gamma-glutamyltransferase E;Protein-glutamine gamma-glutamyltransferase E 50 kDa catalytic chain;Protein-glutamine gamma-glutamyltransferase E 27 kDa non-catalytic chain yes yes 0 1 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.027 76.066 3 1.4866E-08 87645 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 44.164 37.365 93937000 0 0 0 10605000 5140600 4248900 3420100 21696000 3868500 17635000 6853700 12777000 3885400 3806600 0 29985 2150 27401 252165;252166;252167;252168;252169;252170;252171;252172;252173;252174;252175 200196;200197 200196 3457 2 LKPPANIAQPVATAATDVSNGTVK Unmodified 2362.2856 0.28562392 17 A3KN83 SBNO1 Protein strawberry notch homolog 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 76.279 75.684 3 0.0012422 87634 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 29.912 24.843 104590000 10869000 0 0 0 0 10983000 4388500 7813800 9648000 11872000 9756800 8408700 6857800 5823800 18169000 29986 17 27402 252176;252177;252178;252179;252180;252181;252182;252183;252184;252185;252186 200198;200199;200200;200201;200202;200203 200198 6 LKPPTLIHGQAPSAGLPSQK Unmodified 2039.1528 0.15275925 4428 Q9H6Z4 RANBP3 Ran-binding protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 2 1 1 2 1 1 2 1 2 2 60.536 60.738 3;4 0.013586 69358 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 27.129 19.677 108760000 0 0 0 2673700 0 15713000 4754300 7238400 6788900 7291100 5899800 15652000 4732100 9935400 28081000 29987 4428 27403 252187;252188;252189;252190;252191;252192;252193;252194;252195;252196;252197;252198;252199;252200;252201;252202 200204;200205 200204 1 LKPQYLEELPGQLK Unmodified 1654.9294 0.92940782 1120 P21266 GSTM3 Glutathione S-transferase Mu 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.29 0.452 5 2 4 2 1 80.93 75.378 2;3 1.5055E-28 96705 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 138.75 118.45 2292300000 1618600000 534310000 139440000 0 0 0 0 0 0 0 0 0 0 0 0 29988 1120 27404 252203;252204;252205;252206;252207;252208;252209 200206;200207;200208;200209;200210;200211;200212;200213 200210 7 LKPSASFGSPVQSEALAPDSMSHPR Unmodified 2595.2751 0.27513559 2867 Q6BDS2 UHRF1BP1 UHRF1-binding protein 1 yes yes 0 0 1 By MS/MS By matching 10 0 2 1 1 66.393 66.548 4 0.00082368 76199 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 28.951 16.149 14363000 0 0 0 0 0 0 0 8075500 0 6287900 0 0 0 0 0 29989 2867 27405 252210;252211 200214 200214 1 LKPSASFGSPVQSEALAPDSMSHPR Oxidation (M) 2611.2701 0.27005021 2867 Q6BDS2 UHRF1BP1 UHRF1-binding protein 1 yes yes 0 1 1 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 59.379 59.69 3 2.6198E-08 67909 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 49.638 42.649 23694000 0 0 0 0 0 0 0 4843100 3088600 0 7147000 8614900 0 0 0 29990 2867 27405 252212;252213;252214;252215 200215 200215 4515 1 LKPTNPAAQK Unmodified 1066.6135 0.61349341 1707 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.258 12.406 2 0.048266 10776 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 105.57 73.633 224710000 0 0 0 10497000 13279000 11521000 17120000 16225000 14988000 27059000 15401000 30389000 20762000 18108000 29366000 29991 1707 27406 252216;252217;252218;252219;252220;252221;252222;252223;252224;252225;252226;252227 200216 200216 0 LKPTQNASEK Unmodified 1114.5982 0.59823728 3123 Q7Z7F0 KIAA0907 UPF0469 protein KIAA0907 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 6.9813 3.9894 2 0.015521 6074 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 103.55 63.195 85756000 62176000 14136000 9443500 0 0 0 0 0 0 0 0 0 0 0 0 29992 3123 27407 252228;252229;252230 200217;200218 200218 2 LKQESDQLVLNQHPASDK Unmodified 2049.0491 0.049082043 1029 P15924 DSP Desmoplakin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 15 2 2 1 2 2 1 1 2 2 36.957 37.027 3;4 3.4608E-11 40889 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 88.319 75.52 190000000 0 0 0 32177000 8207400 7052000 11336000 66590000 14378000 4390600 0 22205000 23662000 0 0 29993 1029 27408 252231;252232;252233;252234;252235;252236;252237;252238;252239;252240;252241;252242;252243;252244;252245 200219;200220;200221;200222;200223 200219 4 LKREEETLDTIK Unmodified 1473.8039 0.80387296 4655;5016 Q9NUU7;Q9UMR2 DDX19A;DDX19B ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX19B no no 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 33.553 32.166 3 0.00015971 33678 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 105.03 57.84 55103000 11087000 0 0 0 0 0 9218700 0 0 0 0 28105000 0 6692800 0 29994 4655;5016 27409 252246;252247;252248;252249 200224;200225;200226 200225 3 LKSGMQNMSIHTK Oxidation (M) 1489.7381 0.73811836 51 CON__H-INV:HIT000292931 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 23.033 23.363 3 0.0003653 25034 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 65.563 51.657 + 20170000 0 0 0 0 3290600 0 0 0 0 0 0 8023300 0 4458400 4397600 29995 51 27410 252250;252251;252252;252253;252254 200227;200228;200229 200229 47 3 LKYENELALR Unmodified 1247.6874 0.68738664 73;981;76 CON__P13646-1;CON__P19012;P19012;P13646;CON__ENSEMBL:ENSP00000377550 KRT15;KRT13 Keratin, type I cytoskeletal 15;Keratin, type I cytoskeletal 13 no no 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 51.951 52.127 3 0.0012337 58649 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 90.685 35.118 + 85217000 0 0 0 0 0 0 32899000 12275000 0 0 0 0 40042000 0 0 29996 73;76;981 27411 252255;252256;252257 200230;200231 200231 1 LKYENEVALR Unmodified 1233.6717 0.67173657 72 CON__P13645;P13645 KRT10 Keratin, type I cytoskeletal 10 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 43.158 43.333 2;3 5.9478E-32 49144 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 157.38 124.77 + 10953000000 0 0 0 1560100000 642900000 195540000 580850000 1863800000 291590000 804770000 902160000 2862700000 699160000 331750000 217790000 29997 72 27412 252258;252259;252260;252261;252262;252263;252264;252265;252266;252267;252268;252269;252270;252271;252272;252273;252274;252275;252276;252277;252278;252279;252280;252281 200232;200233;200234;200235;200236;200237;200238;200239;200240;200241;200242;200243;200244;200245;200246;200247;200248;200249;200250;200251;200252;200253;200254;200255;200256;200257 200244 24 LKYEPEETVEVPVLK Unmodified 1771.9608 0.96076753 3806 Q96EA4 SPDL1 Protein Spindly yes yes 0 0 1 By MS/MS 3 0 1 1 79.181 75.81 3 0.012191 90939 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 42.242 40.171 6121500 0 6121500 0 0 0 0 0 0 0 0 0 0 0 0 0 29998 3806 27413 252282 200258 200258 1 LLAAAQQMLR Unmodified 1113.6328 0.63284865 2938 Q6P5Z2 PKN3 Serine/threonine-protein kinase N3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 66.735 66.859 2 0.0040858 76689 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 74.127 50.699 36539000 0 0 0 0 2393600 2788500 2305600 3983100 2455400 4330600 3405500 0 3040500 3758200 8078500 29999 2938 27414 252283;252284;252285;252286;252287;252288;252289;252290;252291;252292;252293 200259;200260;200261;200262;200263;200264;200265;200266;200267;200268;200269 200265 11 LLAACSQREQALEATK Unmodified 1787.92 0.91998213 4131 Q9BST9 RTKN Rhotekin yes yes 0 0 1 By MS/MS 2 0 1 1 50.114 42.214 3 0.0029429 58419 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.545 28.713 13784000 13784000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30000 4131 27415 252294 200270;200271 200270 2 LLAAEPLSK Unmodified 940.55933 0.55933258 3395 Q8NBJ5 COLGALT1 Procollagen galactosyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.31 3.1 1 2 10 1 2 1 1 1 1 1 1 1 1 1 1 48.413 47.259 2 0.0074102 60670 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.741 19.264 588610000 346420 522500000 0 5124700 4959300 3968900 3936800 6463500 0 5899700 12304000 10643000 4887800 7570800 0 30001 3395 27416 252295;252296;252297;252298;252299;252300;252301;252302;252303;252304;252305;252306;252307 200272;200273;200274 200273 2 LLAAERATTGYPDPYGGEK Unmodified 2007.9902 0.99017018 1802 P58107 EPPK1 Epiplakin yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 63.149 57.119 3 0.0028602 76841 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 41.912 29.707 11462000 5470000 0 5992100 0 0 0 0 0 0 0 0 0 0 0 0 30002 1802 27417 252308;252309 200275;200276 200275 2 LLAAIDDIDRPK Unmodified 1338.7507 0.75071518 3892 Q96JG6 CCDC132 Coiled-coil domain-containing protein 132 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.063 65.15 3 0.0037136 74591 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 54.023 54.023 79649000 0 0 0 2930200 2637700 9965200 4592100 4767800 5403400 5028300 6760500 14360000 6563200 5829400 10811000 30003 3892 27418 252310;252311;252312;252313;252314;252315;252316;252317;252318;252319;252320;252321 200277;200278;200279;200280;200281;200282 200277 6 LLAALLEDEGGSGRPLLQAAK Unmodified 2121.1794 0.17936793 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 1 By MS/MS 10 0 1 1 83.582 83.772 3 1.0974E-06 96689 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.007 32.133 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30004 5187 27419 252322 200283 200283 1 LLAAQNPLSQADR Unmodified 1395.747 0.74702678 2533 Q15427 SF3B4 Splicing factor 3B subunit 4 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching 10 0 5 1 1 1 1 1 60.989 60.915 2 0.0047482 70484 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 50.108 34.957 9375600 0 0 0 1658600 1572000 0 0 0 0 1141500 0 3491200 0 1512200 0 30005 2533 27420 252323;252324;252325;252326;252327 200284;200285 200285 2 LLAATMEK Unmodified 875.47864 0.47863942 5004 Q9ULT8 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 35.659 35.836 2 0.013039 39469 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 73.26 34.468 60703000 0 0 0 0 4728800 6394600 5020600 4930800 4115400 5688200 7933800 0 6456000 0 15435000 30006 5004 27421 252328;252329;252330;252331;252332;252333;252334;252335;252336 200286;200287;200288;200289;200290 200290 5 LLACIASRPGQCGR Unmodified 1557.7868 0.78679988 1877 P62241 RPS8 40S ribosomal protein S8 yes yes 0 0 1 By MS/MS By matching 10 0 2 1 1 43.489 43.934 3 0.0066206 49257 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 46.481 31.85 17502000 0 0 0 0 0 0 0 0 10093000 0 0 0 0 0 7408700 30007 1877 27422 252337;252338 200291 200291 1 LLADELISPK Unmodified 1097.6332 0.6332258 3711 Q93100 PHKB Phosphorylase b kinase regulatory subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.18 3.74 3 1 7 1 2 1 1 1 1 1 1 1 1 75.585 73.273 2 0.0067891 93838 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.972 56.033 276830000 8648200 218640000 11557000 0 0 8825400 0 0 0 7189800 0 0 0 7814700 14157000 30008 3711 27423 252339;252340;252341;252342;252343;252344;252345;252346;252347;252348;252349 200292;200293;200294;200295;200296;200297;200298;200299;200300;200301;200302;200303 200298 12 LLADPTGAFGK Unmodified 1088.5866 0.58660996 1263 P30044 PRDX5 Peroxiredoxin-5, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.879 63.97 2 0.001453 73103 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 72.643 30.534 470940000 0 0 0 15130000 7158300 21973000 15151000 12650000 10064000 17415000 76116000 61573000 14413000 52241000 167060000 30009 1263 27424 252350;252351;252352;252353;252354;252355;252356;252357;252358;252359;252360;252361 200304;200305;200306;200307;200308;200309;200310;200311;200312;200313;200314;200315;200316 200310 13 LLADQAEAR Unmodified 985.51926 0.51925868 2015 P84098 RPL19 60S ribosomal protein L19 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 24.854 24.71 2 1.3018E-05 26123 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 157.58 79.905 1626400000 0 65734000 0 133580000 112060000 128950000 100130000 106010000 83578000 134310000 102540000 195030000 161050000 116660000 186760000 30010 2015 27425 252362;252363;252364;252365;252366;252367;252368;252369;252370;252371;252372;252373;252374 200317;200318;200319;200320;200321;200322;200323;200324;200325;200326;200327;200328;200329;200330 200318 11 LLADQAEARR Unmodified 1141.6204 0.62036971 2015 P84098 RPL19 60S ribosomal protein L19 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.5 1.94 1 15 1 2 2 1 2 1 1 1 1 1 1 2 21.443 21.214 2;3 1.5033E-09 21906 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 148.94 70.831 1223200000 70768000 0 0 100410000 118520000 31114000 151360000 15327000 26218000 220610000 34815000 51334000 208930000 193820000 0 30011 2015 27426 252375;252376;252377;252378;252379;252380;252381;252382;252383;252384;252385;252386;252387;252388;252389;252390 200331;200332;200333;200334;200335;200336;200337;200338;200339;200340;200341;200342;200343 200335 4 LLADSTARMVEAAK Unmodified 1474.7814 0.78136338 5201 Q9Y4G6 TLN2 Talin-2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 4 2 2 64.482 58.454 2;3 0.0049946 78368 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.632 40.633 250190000 229190000 0 21003000 0 0 0 0 0 0 0 0 0 0 0 0 30012 5201 27427 252391;252392;252393;252394 200344;200345 200345 2 LLAEAGMPSPEWTK Unmodified 1528.7596 0.7595653 3572 Q8WWH5 TRUB1 Probable tRNA pseudouridine synthase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 6 4 2 2 1 1 1 1 77.935 76.138 2 6.0677E-06 94253 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.43 75.034 248620000 0 233770000 3802900 0 0 6515200 4539700 0 0 0 0 0 0 0 0 30013 3572 27428 252395;252396;252397;252398 200346;200347;200348 200347 3 LLAEAGMPSPEWTK Oxidation (M) 1544.7545 0.75447993 3572 Q8WWH5 TRUB1 Probable tRNA pseudouridine synthase 1 yes yes 0 1 0 By MS/MS 2 0 2 2 68.092 62.193 2 0.0019519 78466 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.64 51.598 24168000 0 24168000 0 0 0 0 0 0 0 0 0 0 0 0 0 30014 3572 27428 252399;252400 200349;200350 200349 5061 1 LLAEALNQVTQR Unmodified 1354.7569 0.75686319 2116 Q05655 PRKCD Protein kinase C delta type;Protein kinase C delta type regulatory subunit;Protein kinase C delta type catalytic subunit yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.791 71.85 2 0.00021321 82658 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 84.17 54.36 39826000 0 0 0 1986900 1858100 3247600 0 2755100 2233300 4520100 4866700 4565700 2327900 4492100 6972800 30015 2116 27429 252401;252402;252403;252404;252405;252406;252407;252408;252409;252410;252411;252412 200351;200352;200353;200354;200355;200356;200357;200358;200359;200360;200361 200352 11 LLAEEEEEEK Unmodified 1217.5663 0.56632803 3289 Q8IYW5 RNF168 E3 ubiquitin-protein ligase RNF168 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 27.256 27.46 2 0.024932 29547 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 44.753 35.165 28108000 0 0 0 0 0 3913800 2732000 2648000 3592500 2581300 5183700 0 3731100 3725700 0 30016 3289 27430 252413;252414;252415;252416;252417;252418;252419;252420 200362 200362 1 LLAEGFDDETEDQQLR Unmodified 1877.8643 0.86430096 5048 Q9UPM8 AP4E1 AP-4 complex subunit epsilon-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 68.94 68.995 2 1.6425E-23 79091 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 121.08 97.225 18866000 0 0 0 0 1785400 4374500 3053600 2615100 0 2879000 0 4158900 0 0 0 30017 5048 27431 252421;252422;252423;252424;252425;252426 200363;200364;200365;200366;200367;200368 200365 6 LLAEGHPDPDAELQR Unmodified 1659.8216 0.82164829 1596 P49756 RBM25 RNA-binding protein 25 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 1 1 1 2 2 2 2 1 2 2 1 48.35 48.539 2;3 7.7E-27 54808 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 142.91 102.99 2774200000 0 0 0 145160000 123490000 134300000 146560000 256220000 185520000 271000000 351560000 260970000 258930000 260310000 380210000 30018 1596 27432 252427;252428;252429;252430;252431;252432;252433;252434;252435;252436;252437;252438;252439;252440;252441;252442;252443;252444 200369;200370;200371;200372;200373;200374;200375;200376;200377;200378;200379;200380;200381 200377 11 LLAEGHPDPDAELQRMEQEAER Oxidation (M) 2549.1816 0.18162913 1596 P49756 RBM25 RNA-binding protein 25 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 55.542 55.553 4 7.1235E-05 62410 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.696 38.821 59694000 0 0 0 3904000 4556200 6005900 5727800 5957500 8906900 10762000 0 0 0 0 13874000 30019 1596 27433 252445;252446;252447;252448;252449;252450;252451;252452 200382 200382 2566 1 LLAEILR Unmodified 826.52764 0.52763852 1464 P42704 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 70.962 71.137 2 0.032282 82107 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 73.039 8.2624 25226000 0 0 0 0 0 7143200 0 0 0 0 0 0 5351000 0 12731000 30020 1464 27434 252453;252454;252455 200383;200384;200385 200385 3 LLAELDAIIGK Unmodified 1154.6911 0.69107503 2376 Q14149 MORC3 MORC family CW-type zinc finger protein 3 yes yes 0 0 0 By MS/MS 2 0 1 1 94.783 89.919 2 0.008406 111541 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.846 35.584 10133000 0 10133000 0 0 0 0 0 0 0 0 0 0 0 0 0 30021 2376 27435 252456 200386 200386 1 LLAEMSSFCGDMEK 2 Oxidation (M) 1648.6783 0.67827979 4278 Q9BZZ5 API5 Apoptosis inhibitor 5 yes yes 0 2 0 By MS/MS 2.5 0.5 1 1 2 52.021 46.686 2 0.0023034 60622 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.441 83.828 17818000 0 17818000 0 0 0 0 0 0 0 0 0 0 0 0 0 30022 4278 27436 252457;252458 200387 200387 5733;5734 1 LLAEMSSFCGDMEK Oxidation (M) 1632.6834 0.68336517 4278 Q9BZZ5 API5 Apoptosis inhibitor 5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 6.17 3.85 2 1 3 3 1 1 1 68.44 65.959 2 7.1018E-30 75230 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 144.65 138.26 105740000 0 86035000 0 0 0 0 0 0 0 0 0 6097800 0 4726500 8884700 30023 4278 27436 252459;252460;252461;252462;252463;252464 200388;200389;200390;200391;200392;200393 200388 5733;5734 6 LLAEMSSFCGDMEK Unmodified 1616.6885 0.68845055 4278 Q9BZZ5 API5 Apoptosis inhibitor 5 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS 8 3.46 1 3 1 1 1 1 77.175 76.099 2 1.0247E-06 87601 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.313 85.312 74414000 0 60327000 0 0 0 2628500 0 0 0 0 0 0 0 2968300 8489900 30024 4278 27436 252465;252466;252467;252468 200394;200395 200395 2 LLAEPAGGLVGER Unmodified 1280.7089 0.70885036 2319 Q13572 ITPK1 Inositol-tetrakisphosphate 1-kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.435 64.524 2 0.0023232 73738 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 70.977 27.894 101230000 0 0 0 3810300 4281000 10456000 6881400 5930700 3856000 12578000 10470000 10289000 8785000 7640500 16255000 30025 2319 27437 252469;252470;252471;252472;252473;252474;252475;252476;252477;252478;252479;252480 200396;200397;200398;200399;200400;200401;200402;200403;200404;200405;200406;200407;200408 200397 13 LLAEPVPGIK Unmodified 1035.6328 0.63283187 1833 P61088;Q5JXB2 UBE2N;UBE2NL Ubiquitin-conjugating enzyme E2 N;Putative ubiquitin-conjugating enzyme E2 N-like yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 4 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 67.596 66.254 2 0.0024782 75485 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 83.206 60.466 2658500000 16454000 282340000 15983000 123520000 103150000 261040000 169660000 127230000 107210000 248590000 242060000 247570000 181560000 187340000 344750000 30026 1833 27438 252481;252482;252483;252484;252485;252486;252487;252488;252489;252490;252491;252492;252493;252494;252495;252496 200409;200410;200411;200412;200413;200414;200415;200416;200417;200418;200419;200420;200421;200422;200423;200424;200425;200426;200427 200420 19 LLAEQQNK Unmodified 942.51345 0.51344502 4761 Q9NZ63 C9orf78 Uncharacterized protein C9orf78 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 12.693 12.816 2 0.0067729 11900 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 97.602 36.641 29726000 0 0 0 0 0 9038300 1997100 6654200 0 0 0 12036000 0 0 0 30027 4761 27439 252497;252498;252499;252500 200428 200428 1 LLAESVTEVEIFGK Unmodified 1533.829 0.82902508 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS 2 0 1 1 91.261 83.131 2 4.7162E-06 107771 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 119.03 113.71 65586000 65586000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30028 2392 27440 252501 200429 200429 1 LLAETVAPAVR Unmodified 1138.671 0.67100829 4128 Q9BSJ8 ESYT1 Extended synaptotagmin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.607 58.722 2 1.9202E-05 66469 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 124.98 88.588 197510000 0 0 0 11323000 15326000 15708000 15159000 15444000 12138000 17050000 19770000 21909000 17626000 14098000 21956000 30029 4128 27441 252502;252503;252504;252505;252506;252507;252508;252509;252510;252511;252512;252513 200430;200431;200432;200433;200434;200435;200436;200437;200438;200439;200440;200441;200442 200439 13 LLAEVTLK Unmodified 885.55352 0.55351892 5090 Q9Y285 FARSA Phenylalanine--tRNA ligase alpha subunit yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 61.019 61.193 2 0.030437 68760 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 55.531 16.739 51332000 0 0 0 0 3193000 3427000 5606800 0 3562700 6057100 6076000 6397900 3454700 5779100 7777200 30030 5090 27442 252514;252515;252516;252517;252518;252519;252520;252521;252522;252523 200443 200443 1 LLAFALADTK Unmodified 1061.6121 0.61209643 4946 Q9UJX5 ANAPC4 Anaphase-promoting complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.58 1 2 2 12 3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80.382 79.704 2 0.0026012 92251 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 81.972 48.421 230380000 63578000 3851800 18420000 6592800 7143500 11107000 8793700 8934000 8726800 16033000 13437000 17272000 15074000 11475000 19938000 30031 4946 27443 252524;252525;252526;252527;252528;252529;252530;252531;252532;252533;252534;252535;252536;252537;252538;252539;252540 200444;200445;200446;200447;200448;200449;200450;200451;200452;200453 200449 8 LLAGEDGTSER Unmodified 1146.5517 0.55168102 5054 Q9UPQ0 LIMCH1 LIM and calponin homology domains-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.921 23.127 2 0.00020793 23645 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 105.4 90.727 487020000 0 0 0 24536000 24635000 28966000 32115000 25150000 24606000 49505000 45170000 63051000 59282000 46048000 63952000 30032 5054 27444 252541;252542;252543;252544;252545;252546;252547;252548;252549;252550;252551;252552 200454;200455;200456;200457;200458;200459;200460;200461;200462;200463;200464;200465;200466 200459 13 LLAHQKPPK Unmodified 1030.6287 0.62874955 1063 P17858 PFKL ATP-dependent 6-phosphofructokinase, liver type yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 9.4779 9.5903 2 0.0087661 6953 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 127.84 82.871 40119000 0 0 0 2164000 1930300 2315300 3574100 3437000 1927900 3002100 0 9294100 4626100 3124900 4723500 30033 1063 27445 252553;252554;252555;252556;252557;252558;252559;252560;252561;252562;252563 200467 200467 0 LLAHVRPPVSK Unmodified 1215.7452 0.74517629 861 P08237 PFKM ATP-dependent 6-phosphofructokinase, muscle type yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 1 1 1 1 1 2 2 2 2 2 2 35.301 35.573 2;3 0.001096 38016 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 59.198 43.569 1087800000 0 0 0 48115000 37155000 97692000 66626000 73914000 84790000 88638000 89836000 142750000 116490000 74916000 166890000 30034 861 27446 252564;252565;252566;252567;252568;252569;252570;252571;252572;252573;252574;252575;252576;252577;252578;252579;252580;252581 200468;200469;200470;200471;200472;200473;200474;200475;200476;200477;200478;200479;200480;200481;200482 200477 13 LLAIPVEK Unmodified 881.5586 0.5586043 535 O75717 WDHD1 WD repeat and HMG-box DNA-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 75.617 68.974 2 0.016257 86212 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.47 62.285 34092000 7617100 26475000 0 0 0 0 0 0 0 0 0 0 0 0 0 30035 535 27447 252582;252583 200483 200483 1 LLAITELLQQK Unmodified 1268.7704 0.77038799 1116 P20936 RASA1 Ras GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS 7.33 3.77 1 2 1 1 1 92.482 89.832 2 0.0016784 104880 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.223 32.075 11815000 7733700 0 0 0 0 1611800 0 0 0 0 0 0 0 0 2469900 30036 1116 27448 252584;252585;252586 200484;200485 200484 2 LLALNPDAVELFK Unmodified 1441.8181 0.81806646 4129 Q9BSL1 UBAC1 Ubiquitin-associated domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.12 3.72 2 1 5 2 1 1 1 1 1 1 93.833 92.591 2 0.00068641 107495 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 73.067 53.28 156910000 0 131130000 4390500 0 0 1181500 0 0 0 4310700 4826900 0 0 1451800 9623300 30037 4129 27449 252587;252588;252589;252590;252591;252592;252593;252594 200486;200487;200488;200489;200490;200491 200486 6 LLALNSLYSPK Unmodified 1217.702 0.70197407 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 1 1 1 1 1 2 2 79.511 79.587 2 7.6328E-05 91313 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 133.13 95.407 711470000 0 0 0 33150000 31869000 57005000 30973000 51231000 29347000 56148000 64875000 96424000 53943000 65059000 141450000 30038 1986 27450 252595;252596;252597;252598;252599;252600;252601;252602;252603;252604;252605;252606;252607;252608 200492;200493;200494;200495;200496;200497;200498;200499;200500;200501;200502;200503 200499 12 LLALQEEK Unmodified 942.5386 0.53859714 2255 Q13227 GPS2 G protein pathway suppressor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching 8.23 3.24 2 1 10 2 1 1 1 1 1 1 1 1 1 1 1 45.025 44.106 2 0.0082674 49523 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 86.794 47.251 507950000 0 174250000 4986100 17259000 0 0 23765000 28095000 16992000 35140000 37678000 44999000 43316000 33709000 47754000 30039 2255 27451 252609;252610;252611;252612;252613;252614;252615;252616;252617;252618;252619;252620;252621 200504;200505;200506;200507;200508;200509 200508 6 LLALQFAR Unmodified 930.56509 0.56508666 3328 Q8N3Y7 SDR16C5 Epidermal retinol dehydrogenase 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 77.007 77.062 2 0.011242 88987 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 77.374 62.438 30168000 0 0 0 3711900 2065400 2088900 2253100 4071400 1626500 2987700 2763700 4857800 1556300 0 2185100 30040 3328 27452 252622;252623;252624;252625;252626;252627;252628;252629;252630;252631;252632 200510;200511;200512;200513;200514;200515 200510 6 LLALSGPGGGR Unmodified 996.57163 0.5716286 4376 Q9H307 PNN Pinin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 51.94 51.84 2 0.00031558 58625 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 101.64 41.054 17380000 0 0 0 0 5725600 0 7264300 0 4390300 0 0 0 0 0 0 30041 4376 27453 252633;252634;252635;252636;252637;252638;252639;252640 200516;200517;200518;200519;200520;200521;200522;200523;200524 200517 9 LLALYNQGHIK Unmodified 1268.7241 0.7241065 4019 Q99536 VAT1 Synaptic vesicle membrane protein VAT-1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 2 1 1 1 55.198 55.064 3 0.00038408 62340 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 83.358 73.353 52874000 0 0 0 12281000 9431500 14451000 0 0 0 0 0 0 7277700 9432800 0 30042 4019 27454 252641;252642;252643;252644;252645;252646;252647;252648;252649;252650 200525;200526;200527;200528;200529;200530;200531;200532;200533 200526 9 LLANMVYQYK Oxidation (M) 1257.6427 0.64274463 1231 P28074 PSMB5 Proteasome subunit beta type-5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.54 5 1 15 2 2 2 2 1 1 1 1 2 2 1 2 2 57.568 55.982 2 9.7246E-06 69720 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 132.69 103.54 421090000 182730000 71383000 32319000 6848000 2262400 0 2203100 4082000 0 3188600 26133000 25116000 2650400 16876000 45294000 30043 1231 27455 252651;252652;252653;252654;252655;252656;252657;252658;252659;252660;252661;252662;252663;252664;252665;252666;252667;252668;252669;252670;252671 200534;200535;200536;200537;200538;200539;200540;200541;200542;200543;200544;200545;200546;200547;200548;200549;200550;200551;200552 200545 1825 19 LLANMVYQYK Unmodified 1241.6478 0.64783001 1231 P28074 PSMB5 Proteasome subunit beta type-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 72.208 71.604 2 0.001444 82390 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 110.81 92.496 508030000 367260000 0 0 4765900 1675900 0 1784600 5159600 1985300 4969800 16134000 16751000 3215100 11892000 72439000 30044 1231 27455 252672;252673;252674;252675;252676;252677;252678;252679;252680;252681;252682;252683;252684 200553;200554;200555;200556;200557;200558;200559;200560;200561;200562;200563 200558 11 LLAPDCEIIQEVGK Unmodified 1583.8229 0.82289384 4575 Q9NQT5 EXOSC3 Exosome complex component RRP40 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching 7.86 3.4 1 1 5 2 1 1 1 1 1 81.461 80.366 2 2.1534E-14 99502 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.25 89.074 191700000 0 178200000 0 0 925060 0 0 2532700 0 0 0 0 1868300 3032900 5148900 30045 4575 27456 252685;252686;252687;252688;252689;252690;252691 200564;200565;200566;200567 200564 4 LLAPEAGSHPQQTQK Unmodified 1603.8318 0.83181904 3449 Q8NFQ8 TOR1AIP2 Torsin-1A-interacting protein 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 25.503 25.801 3 0.00086642 26736 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 53.3 33.977 65863000 0 0 0 0 0 6069900 0 0 5757600 10744000 13676000 18497000 0 11118000 0 30046 3449 27457 252692;252693;252694;252695;252696;252697 200568;200569;200570;200571 200571 4 LLAPPEAPGSAPPPAAWVIPGPTTGPK Unmodified 2588.4003 0.40025975 4801 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 91.182 91.325 3 9.6725E-08 105879 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.368 31.347 21422000 0 0 0 0 0 0 1953400 0 0 4484300 2900800 2763400 0 1916200 7404100 30047 4801 27458 252698;252699;252700;252701;252702;252703 200572;200573;200574;200575 200572 4 LLAQDQGQGAPLLEPAP Unmodified 1716.9046 0.90464964 2497 Q15102 PAFAH1B3 Platelet-activating factor acetylhydrolase IB subunit gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 81.03 81.11 2 0.00097007 93350 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.247 36.383 103470000 0 0 0 5103600 0 14899000 4736600 4609600 0 8574400 12830000 14789000 4519600 9687400 23720000 30048 2497 27459 252704;252705;252706;252707;252708;252709;252710;252711;252712;252713 200576;200577;200578;200579 200577 4 LLAQLLGTSEEDSMVGTLYDK Oxidation (M) 2298.1301 0.13009406 4493 Q9HB07 C12orf10 UPF0160 protein MYG1, mitochondrial yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 2 3 1 90.673 85.667 2;3 1.4475E-82 107966 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 151.07 121.38 71171000 24916000 41833000 4422400 0 0 0 0 0 0 0 0 0 0 0 0 30049 4493 27460 252714;252715;252716;252717;252718;252719 200580;200581;200582;200583;200584;200585;200586 200580 5931 7 LLAQLLGTSEEDSMVGTLYDK Unmodified 2282.1352 0.13517944 4493 Q9HB07 C12orf10 UPF0160 protein MYG1, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 96.082 90.68 2 2.2003E-109 113876 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 186.68 176.6 49945000 12736000 37209000 0 0 0 0 0 0 0 0 0 0 0 0 0 30050 4493 27460 252720;252721;252722 200587;200588 200587 2 LLAQQHPPPDR Unmodified 1270.6782 0.67821894 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 21.599 21.882 3 0.00020531 21915 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.64 53.79 163500000 0 0 0 0 18791000 0 0 0 0 21742000 33312000 0 26755000 25426000 37473000 30051 5216 27461 252723;252724;252725;252726;252727;252728;252729;252730 200589;200590;200591;200592;200593;200594;200595;200596 200591 5 LLASADDFGK Unmodified 1035.5237 0.52367535 699 O95834 EML2 Echinoderm microtubule-associated protein-like 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 54.659 48.959 2 1.0676E-05 63557 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.41 77.908 1153300000 6325000 1114300000 32731000 0 0 0 0 0 0 0 0 0 0 0 0 30052 699 27462 252731;252732;252733;252734 200597;200598;200599;200600;200601 200597 5 LLASAGQDNVVR Unmodified 1241.6728 0.67279921 2734 Q5JSH3 WDR44 WD repeat-containing protein 44 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 40.591 41.023 2 0.0013701 44635 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.749 33.331 62864000 0 0 0 0 0 3910800 0 0 0 0 0 14124000 6603100 13553000 24672000 30053 2734 27463 252735;252736;252737;252738;252739;252740 200602;200603;200604;200605;200606 200604 5 LLASANLEEVTMK Oxidation (M) 1433.7436 0.74358089 1365 P35659 DEK Protein DEK yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.43 3.14 5 1 24 1 4 1 2 2 2 2 2 2 2 2 2 2 2 2 67.654 66.619 2;3 1.0392E-13 75516 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 130.01 95.474 1904600000 28415000 914420000 11002000 40652000 71270000 79178000 69297000 48445000 66289000 106720000 118550000 129420000 62846000 64671000 93441000 30054 1365 27464 252741;252742;252743;252744;252745;252746;252747;252748;252749;252750;252751;252752;252753;252754;252755;252756;252757;252758;252759;252760;252761;252762;252763;252764;252765;252766;252767;252768;252769;252770 200607;200608;200609;200610;200611;200612;200613;200614;200615;200616;200617;200618;200619;200620;200621;200622;200623;200624;200625;200626;200627;200628;200629;200630;200631;200632;200633;200634;200635;200636;200637;200638;200639 200619 2122 25 LLASANLEEVTMK Unmodified 1417.7487 0.74866627 1365 P35659 DEK Protein DEK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 75.512 74.373 2 2.7765E-08 86009 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 127.42 71.874 1811200000 33438000 1353900000 13283000 12414000 29753000 23285000 19306000 29387000 24941000 42199000 55407000 57795000 21551000 25903000 68585000 30055 1365 27464 252771;252772;252773;252774;252775;252776;252777;252778;252779;252780;252781;252782;252783;252784;252785;252786 200640;200641;200642;200643;200644;200645;200646;200647;200648;200649;200650;200651;200652;200653;200654;200655;200656;200657;200658;200659;200660 200641 21 LLASCSADGTLK Unmodified 1234.6227 0.62273747 204 O14727 APAF1 Apoptotic protease-activating factor 1 yes yes 0 0 0 By MS/MS 2 0 1 1 44.594 39.375 2 3.9649E-07 51166 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.16 40.722 48350000 0 48350000 0 0 0 0 0 0 0 0 0 0 0 0 0 30056 204 27465 252787 200661;200662 200662 2 LLASCSADMTIK Oxidation (M) 1324.6367 0.63667298 1471 P43034 PAFAH1B1 Platelet-activating factor acetylhydrolase IB subunit alpha yes yes 0 1 0 By MS/MS By MS/MS 2.2 0.4 4 1 3 2 44.041 39.483 2 3.9029E-24 51400 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 170.99 122.71 429370000 0 422580000 6794000 0 0 0 0 0 0 0 0 0 0 0 0 30057 1471 27466 252788;252789;252790;252791;252792 200663;200664;200665 200664 2309 3 LLASCSADMTIK Unmodified 1308.6418 0.64175835 1471 P43034 PAFAH1B1 Platelet-activating factor acetylhydrolase IB subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 61.808 55.82 2 0.0027834 73386 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.456 47.741 50066000 22024000 17835000 10207000 0 0 0 0 0 0 0 0 0 0 0 0 30058 1471 27466 252793;252794;252795 200666;200667;200668 200666 3 LLASEGSTMDEIDLESILGETK Unmodified 2350.1461 0.14613805 3184 Q86WJ1 CHD1L Chromodomain-helicase-DNA-binding protein 1-like yes yes 0 0 0 By MS/MS 2 0 1 1 97.802 93.028 3 0.0036747 115193 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 31.976 23.887 25640000 0 25640000 0 0 0 0 0 0 0 0 0 0 0 0 0 30059 3184 27467 252796 200669 200669 1 LLASFPSAGEQGGEAGAAETGGSAGAGDPGK Unmodified 2716.2576 0.25763085 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 71.456 66.297 3 8.2815E-27 84333 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.557 77.053 66312000 0 66312000 0 0 0 0 0 0 0 0 0 0 0 0 0 30060 645 27468 252797;252798 200670;200671;200672;200673 200671 4 LLASIAEDYRK Unmodified 1277.698 0.69795133 2463 Q14C86 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.54 3.69 4 9 3 1 1 1 1 1 1 1 1 1 1 56.504 54.216 2;3 0.00019423 59846 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 79.82 32.261 396080000 141210000 24584000 0 0 16878000 27576000 14061000 24849000 24951000 35260000 30823000 0 24539000 31352000 0 30061 2463 27469 252799;252800;252801;252802;252803;252804;252805;252806;252807;252808;252809;252810;252811 200674;200675;200676;200677;200678;200679;200680;200681;200682;200683;200684;200685;200686;200687;200688;200689;200690;200691;200692;200693;200694;200695;200696 200691 21 LLASINSTVR Unmodified 1072.6241 0.6240581 2608 Q16531 DDB1 DNA damage-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.008 52.155 2 4.8111E-09 57644 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 157.68 48.665 314620000 0 0 0 7829300 15388000 16991000 9292200 14494000 9789100 23954000 44881000 37046000 16796000 31623000 86535000 30062 2608 27470 252812;252813;252814;252815;252816;252817;252818;252819;252820;252821;252822;252823 200697;200698;200699;200700;200701;200702;200703;200704;200705;200706;200707;200708;200709;200710 200700 14 LLASLVK Unmodified 742.49528 0.49527576 2262 Q13263 TRIM28 Transcription intermediary factor 1-beta yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 63.485 56.397 1 0.040476 72176 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 135.87 29.104 78199000 40966000 37234000 0 0 0 0 0 0 0 0 0 0 0 0 0 30063 2262 27471 252824;252825 200711 200711 0 LLASMMCK Unmodified 952.45442 0.45441528 388 O60256 PRPSAP2 Phosphoribosyl pyrophosphate synthase-associated protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 56.217 50.402 2 0.038507 65128 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.296 53.529 40167000 0 40167000 0 0 0 0 0 0 0 0 0 0 0 0 0 30064 388 27472 252826 200712 200712 1 LLASPSSR Unmodified 829.46577 0.46576654 2467 Q15003 NCAPH Condensin complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 21.176 21.525 2 0.02755 22245 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 57.281 7.9225 191740000 0 0 0 0 0 23380000 0 16318000 0 27264000 35831000 32683000 24776000 0 31492000 30065 2467 27473 252827;252828;252829;252830;252831;252832;252833;252834 200713;200714;200715;200716 200716 4 LLASQGSQGAPLLSTPK Unmodified 1666.9254 0.92538508 2449 Q14807 KIF22 Kinesin-like protein KIF22 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 67.537 67.687 2 3.0909E-18 76796 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 99.011 83.745 60856000 0 0 0 0 4310400 5043100 4874400 5623900 3649600 4546600 8266700 8162400 3727700 4381500 8269400 30066 2449 27474 252835;252836;252837;252838;252839;252840;252841;252842;252843;252844;252845 200717;200718;200719;200720;200721;200722;200723;200724;200725;200726;200727 200720 11 LLASSDPLAQIAEDK Unmodified 1569.825 0.82500233 1338 P34949 MPI Mannose-6-phosphate isomerase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 80.7 80.862 2 0.00024539 93141 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.185 51.246 15246000 0 0 0 0 0 0 0 0 0 0 0 0 0 3292000 11954000 30067 1338 27475 252846;252847;252848 200728;200729;200730 200729 3 LLASSPALPSSGAQAR Unmodified 1524.826 0.82600539 4755 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.93 56.056 2 0.0044425 64172 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 55.452 40.762 82079000 0 0 0 5443400 4318000 7003300 6837100 6718000 4536800 8808100 8470300 10251000 7519700 4361600 7810900 30068 4755 27476 252849;252850;252851;252852;252853;252854;252855;252856;252857;252858;252859;252860 200731;200732;200733;200734 200734 3 LLASTTPEEILEK Unmodified 1442.7868 0.78682591 3551 Q8WUR7 C15orf40 UPF0235 protein C15orf40 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.57 3.85 3 1 3 1 2 1 1 1 1 78.272 75.221 2 1.9835E-08 93988 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.86 71.835 501250000 21057000 453330000 6614900 0 0 0 0 0 0 0 0 6760600 0 0 13493000 30069 3551 27477 252861;252862;252863;252864;252865;252866;252867 200735;200736;200737;200738;200739;200740;200741;200742 200735 8 LLATASFTK Unmodified 950.54368 0.54368251 3601 Q8WYP5 AHCTF1 Protein ELYS yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 51.603 51.535 2 0.03281 57955 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 47.187 4.0634 17162000 0 0 0 0 6891600 0 0 5233500 5036800 0 0 0 0 0 0 30070 3601 27478 252868;252869;252870;252871 200743;200744;200745 200744 3 LLATEQEDAAVAK Unmodified 1357.7089 0.70890994 4817 Q9P2E9 RRBP1 Ribosome-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 41.132 40.795 2 1.5897E-13 50880 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145.34 109.4 131860000 0 73755000 0 4794500 3758800 4389400 5137200 4826600 4344900 5431700 7504400 9696300 0 0 8224400 30071 4817 27479 252872;252873;252874;252875;252876;252877;252878;252879;252880;252881;252882 200746;200747;200748;200749;200750;200751;200752;200753;200754;200755;200756 200750 11 LLATGSQDR Unmodified 959.50361 0.50360861 2188 Q12788 TBL3 Transducin beta-like protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 17.148 17.124 2 0.033064 16948 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 47.082 13.079 10503000 0 0 0 0 2940000 0 4371500 3191000 0 0 0 0 0 0 0 30072 2188 27480 252883;252884;252885 200757;200758;200759 200757 3 LLATGSQDRTAK Unmodified 1259.6834 0.68336389 2188 Q12788 TBL3 Transducin beta-like protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 17.52 14.07 3 0.0025526 20891 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.345 60.93 74544000 53243000 11705000 9595800 0 0 0 0 0 0 0 0 0 0 0 0 30073 2188 27481 252886;252887;252888 200760 200760 0 LLAVAATAPPDAPNREEVFDER Unmodified 2380.2023 0.20228822 1073 P18206 VCL Vinculin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75.009 74.871 3 4.7441E-72 85461 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 128.14 116.08 666110000 421350 0 4989700 22750000 15531000 68848000 24346000 30690000 22776000 65863000 77519000 70248000 26538000 53296000 182290000 30074 1073 27482 252889;252890;252891;252892;252893;252894;252895;252896;252897;252898;252899;252900;252901;252902 200761;200762;200763;200764;200765;200766;200767;200768;200769;200770;200771;200772;200773;200774;200775;200776 200772 16 LLAVAATAPPDAPNREEVFDERAANFENHSGK Unmodified 3435.6807 0.68074472 1073 P18206 VCL Vinculin yes yes 0 0 2 By MS/MS 2 0 2 2 80.132 72.002 4;5 3.5305E-09 94456 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 41.734 39.24 88661000 88661000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30075 1073 27483 252903;252904 200777;200778 200778 1 LLAVSLLDCTVK Unmodified 1330.753 0.75302336 5044 Q9UNX4 WDR3 WD repeat-containing protein 3 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 92.912 84.781 2 0.0069433 109888 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.276 51.217 5971300 5971300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30076 5044 27484 252905;252906 200779;200780 200779 2 LLAYALDYWSK Unmodified 1341.6969 0.69688869 4257;4466 Q9BZ23;Q9H999 PANK2;PANK3 Pantothenate kinase 2, mitochondrial;Pantothenate kinase 3 no no 0 0 0 By MS/MS 10 0 1 1 86.46 86.506 2 0.0081791 100229 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 52.167 39.13 3542900 0 0 0 0 0 3542900 0 0 0 0 0 0 0 0 0 30077 4257;4466 27485 252907 200781 200781 1 LLCEDPVFAEYIK Unmodified 1595.7905 0.79053108 3024 Q70CQ2 USP34 Ubiquitin carboxyl-terminal hydrolase 34 yes yes 0 0 0 By MS/MS 2 0 1 1 91.897 86.987 2 0.007106 108066 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 63.415 45.607 26043000 0 26043000 0 0 0 0 0 0 0 0 0 0 0 0 0 30078 3024 27486 252908 200782 200782 1 LLCEYQELTSTK Unmodified 1483.7228 0.72284545 100 CON__Q7RTT2;CON__Q8N1N4-2;Q8N1N4 KRT78 Keratin, type II cytoskeletal 78 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 3 1 1 1 1 63.277 63.263 2 1.4057E-10 73033 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 172.27 139.95 + 166290000 0 0 0 80371000 9289900 10229000 0 0 0 23331000 15038000 11058000 16973000 0 0 30079 100 27487 252909;252910;252911;252912;252913;252914;252915;252916;252917;252918 200783;200784;200785;200786;200787;200788;200789;200790;200791;200792;200793 200791 11 LLCGEEK Unmodified 847.41095 0.41095378 25 A6NDU8 C5orf51 UPF0600 protein C5orf51 yes yes 0 0 0 By MS/MS 2 0 1 1 17.21 13.79 2 0.029967 18187 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.006 49.396 113200000 0 113200000 0 0 0 0 0 0 0 0 0 0 0 0 0 30080 25 27488 252919 200794 200794 1 LLCGLLAER Unmodified 1043.5798 0.57975045 994 P14174 MIF Macrophage migration inhibitory factor yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 73.875 73.982 2 0.0039822 84979 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 98.933 41.122 533620000 0 0 0 3366200 0 3819400 3498000 3280800 4004600 0 77571000 106430000 5747000 56775000 269140000 30081 994 27489 252920;252921;252922;252923;252924;252925;252926;252927;252928;252929 200795;200796;200797;200798;200799;200800 200799 6 LLDAAYK Unmodified 792.43815 0.43815481 4931 Q9UIW2 PLXNA1 Plexin-A1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 27.913 28.301 2 0.02563 30406 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 80.377 0 7253600000 0 0 0 0 0 0 748040000 485160000 0 0 1297500000 1720900000 972010000 848050000 1181900000 30082 4931 27490 252930;252931;252932;252933;252934;252935;252936 200801;200802;200803 200802 3 LLDAEDVDVPSPDEK Unmodified 1640.7781 0.77811172 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 68.514 68.501 2 1.3356E-09 78669 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 91.937 82.505 31331000 0 0 0 3321500 2340700 4125300 2788300 2681400 0 5300800 4640700 0 3190700 2941900 0 30083 5049 27491 252937;252938;252939;252940;252941;252942;252943;252944;252945 200804;200805;200806;200807;200808;200809;200810 200804 6 LLDAESEDRPK Unmodified 1271.6357 0.635745 632 O95239;Q2VIQ3 KIF4A;KIF4B Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.95 2.5 3 17 1 2 1 2 2 1 1 1 1 2 1 1 2 2 25.471 24.97 2;3 1.1124E-05 30580 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 121.73 77.925 234700000 176940 31846000 0 12366000 16403000 21453000 18011000 2840800 12122000 19162000 16021000 15283000 15878000 18419000 34718000 30084 632 27492 252946;252947;252948;252949;252950;252951;252952;252953;252954;252955;252956;252957;252958;252959;252960;252961;252962;252963;252964;252965 200811;200812;200813;200814;200815;200816;200817;200818;200819;200820;200821;200822;200823;200824;200825;200826 200817 12 LLDAPGIVPGPNSEVGTILR Unmodified 2017.1208 0.12079042 4674 Q9NVN8 GNL3L Guanine nucleotide-binding protein-like 3-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 88.986 89.14 2 0.0021005 103157 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.787 26.02 8717900 0 0 0 0 0 0 0 0 0 2986300 1720600 0 0 0 4011000 30085 4674 27493 252966;252967;252968 200827;200828 200828 2 LLDAQLATGGIVDPR Unmodified 1537.8464 0.84640648 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 78.597 78.694 2 1.0236E-18 90907 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 106.49 77.019 77775000 0 0 0 0 9210800 7284300 6183800 6845100 0 7152300 8718600 9762600 7059600 7528200 8029800 30086 2501 27494 252969;252970;252971;252972;252973;252974;252975;252976;252977;252978;252979 200829;200830;200831;200832;200833;200834;200835;200836;200837;200838;200839 200830 11 LLDAQLSTGGIVDPSK Unmodified 1612.8672 0.8672015 2501 Q15149 PLEC Plectin yes yes 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 75.59 75.627 2 0.00020073 87275 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 71.548 57.642 107540000 0 0 0 3119700 8952400 8323900 9162200 9618000 9169000 12323000 13609000 15553000 8336900 9376900 0 30087 2501 27495 252980;252981;252982;252983;252984;252985;252986;252987;252988;252989;252990 200840 200840 1 LLDAVDTYIPVPARDLEK Unmodified 2027.0939 0.09390697 1572 P49411 TUFM Elongation factor Tu, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS 4.83 3.67 3 1 2 1 2 1 1 1 88.409 85.355 3 1.1925E-19 107231 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.77 80.384 175460000 22769000 122280000 14430000 0 0 0 0 0 0 0 3248000 0 0 0 12739000 30088 1572 27496 252991;252992;252993;252994;252995;252996 200841;200842;200843;200844;200845;200846;200847 200842 7 LLDCLQESHSFSK Unmodified 1562.7399 0.73989249 5276 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 63.556 57.568 3 0.00063323 76848 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.987 46.704 54283000 37723000 13577000 2982400 0 0 0 0 0 0 0 0 0 0 0 0 30089 5276 27497 252997;252998;252999 200848;200849;200850 200849 2 LLDDAMAADK Oxidation (M) 1077.5012 0.50122535 4506 Q9HC38 GLOD4 Glyoxalase domain-containing protein 4 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 29.99 24.957 2 0.0023217 32832 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.07 51.941 179030000 13328000 165700000 0 0 0 0 0 0 0 0 0 0 0 0 0 30090 4506 27498 253000;253001 200851;200852 200851 5939 2 LLDDAMAADK Unmodified 1061.5063 0.50631073 4506 Q9HC38 GLOD4 Glyoxalase domain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 46.595 40.936 2 0.0039682 54071 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.867 46.785 222980000 16453000 203830000 2697500 0 0 0 0 0 0 0 0 0 0 0 0 30091 4506 27498 253002;253003;253004 200853;200854;200855;200856 200854 4 LLDDNGNIAEELSILK Unmodified 1755.9254 0.92544466 418 O60613 SEP15 15 kDa selenoprotein yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 94.859 91.202 2 9.0317E-07 112994 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.71 102.86 58595000 0 57392000 1202800 0 0 0 0 0 0 0 0 0 0 0 0 30092 418 27499 253005;253006 200857 200857 1 LLDDVSFHPCIR Unmodified 1470.7289 0.72893388 5117 Q9Y2T2 AP3M1 AP-3 complex subunit mu-1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 74.222 74.383 3 0.027997 85293 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 34 27.564 15624000 0 0 0 0 0 2916300 0 0 1728200 0 0 0 0 5102600 5876800 30093 5117 27500 253007;253008;253009;253010 200858 200858 1 LLDEAIQAVK Unmodified 1098.6285 0.62847478 3961 Q96QK1 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 66.294 64.69 2 0.00080802 81925 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.5 36.575 2668100000 64977000 2172100000 65743000 14422000 12410000 18058000 17186000 16385000 15627000 23560000 48228000 47579000 17064000 37015000 97718000 30094 3961 27501 253011;253012;253013;253014;253015;253016;253017;253018;253019;253020;253021;253022;253023;253024;253025;253026;253027 200859;200860;200861;200862;200863;200864;200865;200866;200867;200868;200869;200870;200871;200872;200873;200874;200875;200876;200877;200878 200864 20 LLDEDEIR Unmodified 1001.5029 0.50293991 360 O43719 HTATSF1 HIV Tat-specific factor 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 45.086 45.269 2 0.011282 50590 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 77.282 23.931 120610000 0 0 0 12598000 0 16594000 0 0 0 13740000 17555000 0 0 25914000 34214000 30095 360 27502 253028;253029;253030;253031;253032;253033;253034 200879;200880;200881;200882 200880 2 LLDEDEIRGYK Unmodified 1349.6827 0.68269519 360 O43719 HTATSF1 HIV Tat-specific factor 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.53 3 2 11 2 2 1 1 1 1 1 1 1 1 1 1 1 1 52.322 50.71 3 2.5117E-09 62570 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 114.89 85.553 1164900000 112850000 302880000 136440000 26838000 0 36235000 35367000 33076000 38228000 33529000 77405000 75970000 85917000 71921000 98225000 30096 360 27503 253035;253036;253037;253038;253039;253040;253041;253042;253043;253044;253045;253046;253047;253048;253049;253050 200883;200884;200885;200886;200887;200888;200889;200890;200891;200892;200893;200894;200895;200896;200897;200898;200899 200893 16 LLDEEEATDNDLR Unmodified 1531.7002 0.70019575 3549 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 4 2 1 1 50.566 50.362 2 5.1038E-14 55907 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 143.61 118.76 10741000 0 0 0 4137000 0 0 0 0 0 0 0 0 0 6603700 0 30097 3549 27504 253051;253052;253053;253054 200900;200901;200902 200901 3 LLDEEEATDNDLRAK Unmodified 1730.8323 0.83227255 3549 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.097 45.268 3 4.3341E-27 50291 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 131.53 124.07 219280000 0 0 0 8382000 8906000 34272000 12299000 7626700 10668000 18816000 20761000 24062000 18369000 15238000 39876000 30098 3549 27505 253055;253056;253057;253058;253059;253060;253061;253062;253063;253064;253065;253066 200903;200904;200905;200906;200907;200908;200909;200910;200911;200912;200913;200914;200915;200916 200915 14 LLDEEISR Unmodified 973.50803 0.50802529 3949 Q96PU8 QKI Protein quaking yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 42.074 42.315 2 0.0071701 47788 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 123.69 56.52 571200000 0 0 0 0 34345000 46833000 42657000 46074000 29781000 55420000 69254000 65784000 70767000 48370000 61915000 30099 3949 27506 253067;253068;253069;253070;253071;253072;253073;253074;253075;253076;253077 200917;200918;200919;200920;200921;200922;200923;200924 200924 7 LLDELSDPESSK Unmodified 1331.6456 0.64564098 3502 Q8TDJ6 DMXL2 DmX-like protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 58.996 53.154 2 0.0038961 68404 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.201 48.631 33070000 0 33070000 0 0 0 0 0 0 0 0 0 0 0 0 0 30100 3502 27507 253078 200925 200925 1 LLDELSPNTAPHK Unmodified 1433.7514 0.75144346 1147 P22830 FECH Ferrochelatase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching 10 0 5 1 1 1 1 1 50.243 50.268 3 0.018108 56893 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 22.989 14.455 28221000 0 0 0 6630700 0 0 5390800 5910600 0 0 0 0 6274800 4013700 0 30101 1147 27508 253079;253080;253081;253082;253083 200926 200926 1 LLDEQEQEDEEASTGSHLK Unmodified 2156.971 0.97095088 4490 Q9HAU5 UPF2 Regulator of nonsense transcripts 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 42.308 41.275 3 1.2942E-69 55012 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 153.21 143.74 202130000 26407000 41688000 0 9360700 6497100 12003000 8886600 5371400 8563400 15379000 12054000 13039000 12154000 10101000 20622000 30102 4490 27509 253084;253085;253086;253087;253088;253089;253090;253091;253092;253093;253094;253095;253096;253097;253098 200927;200928;200929;200930;200931;200932;200933;200934;200935;200936;200937;200938;200939;200940;200941;200942;200943;200944;200945;200946 200937 20 LLDEQFAVLR Unmodified 1202.6659 0.66592292 461 O75146 HIP1R Huntingtin-interacting protein 1-related protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 80.133 80.053 2 0.044688 92533 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 61.679 20.231 17064000 0 0 0 3930300 0 7558900 0 5574500 0 0 0 0 0 0 0 30103 461 27510 253099;253100;253101 200947 200947 0 LLDESESAASSR Unmodified 1263.5943 0.59427411 3303 Q8N108 MIER1 Mesoderm induction early response protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 2 1 1 26.549 26.915 2 0.001556 28736 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 100.48 68.606 23256000 0 0 0 0 0 0 2673000 0 562170 0 0 4983200 2540400 4638800 7858400 30104 3303 27511 253102;253103;253104;253105;253106;253107;253108;253109;253110 200948;200949;200950;200951;200952;200953 200951 5 LLDEVFFSEK Unmodified 1225.6231 0.62305505 1196 P25789 PSMA4 Proteasome subunit alpha type-4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.56 3.86 6 2 10 3 3 2 1 1 1 2 1 1 1 1 1 83.866 82.034 2 2.9594E-06 102610 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 148.52 124.37 2243100000 320230000 1326400000 333740000 16803000 0 0 424390 0 0 0 0 53473000 0 0 192000000 30105 1196 27512 253111;253112;253113;253114;253115;253116;253117;253118;253119;253120;253121;253122;253123;253124;253125;253126;253127;253128 200954;200955;200956;200957;200958;200959;200960;200961;200962;200963;200964;200965;200966;200967;200968;200969;200970;200971;200972;200973 200956 19 LLDFLQK Unmodified 875.51165 0.5116541 3428 Q8NEM7 SUPT20H Transcription factor SPT20 homolog yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 76.898 76.854 2 0.027575 88993 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 77.374 8.9757 26672000 0 0 0 1860700 2016800 2999200 0 3555200 0 6471400 0 0 5876100 3892800 0 30106 3428 27513 253129;253130;253131;253132;253133;253134;253135 200974 200974 1 LLDGLEVTAR Unmodified 1085.6081 0.60807369 2806 Q5VSL9 STRIP1 Striatin-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 68.279 68.302 2 0.010972 78237 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.064 11.295 33626000 0 0 0 2000800 2377100 0 0 4672100 0 5353700 5296200 4332000 4174000 5420100 0 30107 2806 27514 253136;253137;253138;253139;253140;253141;253142;253143;253144 200975;200976;200977;200978;200979 200978 5 LLDGPPGVDVTLLPAPPAR Unmodified 1897.0673 0.067298289 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 90.283 90.373 2 7.4625E-05 104703 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.809 61.439 28459000 0 0 0 0 887300 1610500 0 1558700 0 4189600 2759200 4427300 1713800 3180100 8132700 30108 645 27515 253145;253146;253147;253148;253149;253150;253151;253152;253153 200980;200981;200982;200983;200984;200985;200986;200987;200988 200982 9 LLDGPSTEK Unmodified 958.49713 0.49712625 1149 P23193 TCEA1 Transcription elongation factor A protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 6.17 3.85 2 1 3 1 2 2 1 25.699 23.694 2 0.00050548 28858 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 127.56 55.426 1504200000 50677000 1274300000 0 0 0 0 0 0 0 0 0 82648000 0 0 96633000 30109 1149 27516 253154;253155;253156;253157;253158;253159 200989;200990;200991;200992;200993;200994;200995 200991 7 LLDHRPVIQGETR Unmodified 1532.8423 0.84232415 3501 Q8TDH9 BLOC1S5 Biogenesis of lysosome-related organelles complex 1 subunit 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 35.965 36.153 3 0.00040833 39805 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 71.548 49.998 66367000 0 0 0 4049400 0 5209400 3933500 5086700 4714700 4546400 7282300 0 9357600 8788100 13399000 30110 3501 27517 253160;253161;253162;253163;253164;253165;253166;253167;253168;253169;253170 200996;200997;200998;200999;201000;201001;201002;201003;201004;201005;201006 200996 11 LLDIEGLYSK Unmodified 1149.6281 0.62814043 3643 Q92621 NUP205 Nuclear pore complex protein Nup205 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 80.733 80.019 2 0.0024043 92709 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 83.948 38.866 106110000 0 60929000 1908300 1810500 1608300 4229500 2131100 0 3796900 4454700 4362900 5261000 3173000 4148200 8298200 30111 3643 27518 253171;253172;253173;253174;253175;253176;253177;253178;253179;253180;253181;253182;253183;253184;253185 201007;201008;201009;201010;201011;201012;201013;201014;201015 201015 9 LLDISELDMVGAGR Oxidation (M) 1503.7603 0.76029359 4381 Q9H3P2 NELFA Negative elongation factor A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 83.326 83.352 2 1.7174E-16 96179 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 113.63 90.107 63254000 0 0 0 2415400 6275900 0 4471100 0 7096400 15390000 9632800 0 6857400 11115000 0 30112 4381 27519 253186;253187;253188;253189;253190;253191;253192;253193;253194;253195 201016;201017;201018;201019;201020;201021;201022;201023;201024;201025;201026 201018 5836 10 LLDISELDMVGAGR Unmodified 1487.7654 0.76537896 4381 Q9H3P2 NELFA Negative elongation factor A yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 87.687 87.838 2 1.1339E-07 101634 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 106.35 79.25 6072000 0 0 0 0 0 0 0 0 582410 1603900 0 0 0 0 3885600 30113 4381 27519 253196;253197;253198 201027;201028 201028 2 LLDISELDMVGAGREAK Unmodified 1815.94 0.94004887 4381 Q9H3P2 NELFA Negative elongation factor A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 87.762 82.627 3 3.6785E-26 104104 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.56 79.169 39969000 7910000 31217000 841500 0 0 0 0 0 0 0 0 0 0 0 0 30114 4381 27520 253199;253200;253201 201029;201030 201029 2 LLDIVAR Unmodified 798.49634 0.49633839 2210 Q12931 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.071 59.184 2 0.032282 68391 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 73.039 20.356 382500000 0 0 0 22391000 23078000 39499000 34004000 26437000 25175000 36030000 37295000 32741000 32347000 32481000 41018000 30115 2210 27521 253202;253203;253204;253205;253206;253207;253208;253209;253210;253211;253212;253213 201031 201031 1 LLDKDELVSK Unmodified 1158.6496 0.64960415 2278 Q13395 TARBP1 Probable methyltransferase TARBP1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 44.454 39.932 3 0.024961 52018 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 51.454 16.733 33852000 0 28269000 5582600 0 0 0 0 0 0 0 0 0 0 0 0 30116 2278 27522 253214;253215 201032 201032 1 LLDLELTSR Unmodified 1058.5972 0.59717465 5113 Q9Y2Q9 MRPS28 28S ribosomal protein S28, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 75.527 75.636 2 0.0089221 86818 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 68.224 21.798 81236000 0 0 0 0 4733200 4749200 5940600 7255500 8098200 11471000 9349400 10305000 8002800 0 11331000 30117 5113 27523 253216;253217;253218;253219;253220;253221;253222;253223;253224;253225;253226 201033;201034;201035;201036;201037;201038;201039;201040;201041;201042;201043 201037 11 LLDLENIQIPEAPPPIPK Unmodified 1996.1245 0.12447882 3895 Q96JJ3 ELMO2 Engulfment and cell motility protein 2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 93.782 93.912 2 0.0029171 108927 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.252 53.252 3651300 0 0 0 0 0 0 0 0 0 1788200 0 0 0 0 1863100 30118 3895 27524 253227;253228 201044;201045 201045 2 LLDLNPASR Unmodified 997.55564 0.55564418 142 O00311 CDC7 Cell division cycle 7-related protein kinase yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 56.508 56.731 2 0.0095982 64823 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 66.27 3.7239 3525900 0 0 0 0 0 0 0 0 0 0 0 0 3525900 0 0 30119 142 27525 253229;253230 201046;201047 201047 2 LLDLVQQSCNYK Unmodified 1479.7392 0.73916421 1770 P55769 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 69.063 67.741 2 3.9562E-22 85970 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 192.26 180.03 220800000 7679800 106800000 3582100 0 5201200 7538700 5595400 8397200 7928600 10827000 12224000 14129000 11009000 7547500 12339000 30120 1770 27526 253231;253232;253233;253234;253235;253236;253237;253238;253239;253240;253241;253242;253243;253244;253245 201048;201049;201050;201051;201052;201053;201054;201055;201056;201057;201058;201059;201060;201061;201062 201050 11 LLDLYESVDK Unmodified 1193.618 0.61796967 2947 Q6PGP7 TTC37 Tetratricopeptide repeat protein 37 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 77.067 71.816 2 0.0034945 90439 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.15 73.357 255990000 8363700 244900000 2726300 0 0 0 0 0 0 0 0 0 0 0 0 30121 2947 27527 253246;253247;253248 201063;201064 201063 2 LLDMDGIIVEK Unmodified 1244.6686 0.66862503 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 81.718 81.806 2 0.00010974 94760 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 114.5 81.656 48738000 0 0 0 0 4011100 6173900 4020700 4486400 2781400 0 0 0 4313900 6071400 16879000 30122 2378 27528 253249;253250;253251;253252;253253;253254;253255;253256;253257 201065;201066;201067;201068;201069;201070;201071;201072;201073 201072 9 LLDMDGIIVEK Oxidation (M) 1260.6635 0.66353965 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 66.003 66.16 2 0.00025788 75991 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 86.898 64.812 32327000 0 0 0 0 0 0 0 0 0 9362000 0 0 12478000 10487000 0 30123 2378 27528 253258;253259;253260 201074;201075;201076 201076 3866 1 LLDMVGK Unmodified 774.43096 0.43096094 2524 Q15382 RHEB GTP-binding protein Rheb yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 2 1 2 1 1 1 44.07 44.359 2 0.029815 53277 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 75.311 30.7 191950000 0 0 0 0 0 0 32323000 22806000 35859000 11403000 56565000 0 6792800 8192200 18008000 30124 2524 27529 253261;253262;253263;253264;253265;253266;253267;253268;253269;253270 201077;201078 201077 2 LLDNEDGENPQR Unmodified 1398.6375 0.63753591 3709 Q93074 MED12 Mediator of RNA polymerase II transcription subunit 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 26.58 26.793 2 2.2199E-06 27470 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 122.13 107.93 48286000 0 0 0 3376100 2756800 0 0 7315900 2973600 4497100 0 7027000 8538800 5461000 6339900 30125 3709 27530 253271;253272;253273;253274;253275;253276;253277;253278;253279;253280;253281 201079;201080;201081;201082;201083;201084;201085;201086;201087;201088;201089 201085 9 LLDNSHLPATFK Unmodified 1354.7245 0.72450043 3106 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 69.866 63.875 3 0.012346 85256 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 34.179 12.123 9149200 6935300 0 2213900 0 0 0 0 0 0 0 0 0 0 0 0 30126 3106 27531 253282;253283 201090 201090 1 LLDPEDISVDHPDEK Unmodified 1720.8156 0.81555986 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 65.801 64.466 3 7.2534E-08 78348 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 106.3 88.285 1480900000 154360000 1034700000 21142000 10334000 7126800 27868000 15337000 12435000 11046000 30159000 31954000 27669000 16756000 26445000 53535000 30127 2047 27532 253284;253285;253286;253287;253288;253289;253290;253291;253292;253293;253294;253295;253296;253297;253298;253299 201091;201092;201093;201094;201095;201096;201097;201098;201099;201100;201101;201102;201103;201104 201096 13 LLDPEDVAVQLPDK Unmodified 1550.8192 0.81918867 1517 P46939 UTRN Utrophin yes yes 0 0 0 By MS/MS 2 0 1 1 85.683 80.909 2 0.0016872 100516 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.815 41.951 47736000 0 47736000 0 0 0 0 0 0 0 0 0 0 0 0 0 30128 1517 27533 253300 201105 201105 1 LLDPEDVAVQLPDKK Unmodified 1678.9142 0.91415169 1517 P46939 UTRN Utrophin yes yes 0 0 1 By MS/MS 3 0 1 1 79.423 76.052 3 0.0043654 91233 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 47.545 37.192 4569400 0 4569400 0 0 0 0 0 0 0 0 0 0 0 0 0 30129 1517 27534 253301 201106 201106 1 LLDPEDVDVPQPDEK Unmodified 1707.8203 0.82031089 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.068 72.136 2 0.0026397 82885 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 63.473 56.87 192340000 0 0 0 13285000 13713000 16653000 14315000 11914000 11922000 18386000 22761000 22202000 13716000 14447000 19019000 30130 2501 27535 253302;253303;253304;253305;253306;253307;253308;253309;253310;253311;253312;253313 201107;201108;201109;201110;201111;201112;201113;201114;201115;201116 201115 9 LLDPEDVDVSSPDEK Unmodified 1656.773 0.77302634 2086 Q03001 DST Dystonin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 64.974 65.007 2 1.1164E-18 74561 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 106.01 93.051 20866000 0 0 0 0 2304000 3060000 2975100 0 0 5493800 3503500 0 3529600 0 0 30131 2086 27536 253314;253315;253316;253317;253318;253319;253320 201117;201118;201119;201120;201121;201122;201123 201119 7 LLDPEDVNVDQPDEK Unmodified 1724.8105 0.81047448 241 O15020 SPTBN2 Spectrin beta chain, non-erythrocytic 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 64.096 63.454 2 1.9329E-30 78756 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.67 103.82 59681000 0 28571000 0 5942600 2208700 3526200 3051900 0 0 4129300 3982300 0 0 3729300 4539300 30132 241 27537 253321;253322;253323;253324;253325;253326;253327;253328;253329 201124;201125;201126;201127;201128;201129;201130;201131 201126 8 LLDPIREK Unmodified 982.58113 0.58113065 1740 P54577 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 47.461 41.727 2 0.025183 51774 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 107.59 23.35 439140000 340060000 59725000 39350000 0 0 0 0 0 0 0 0 0 0 0 0 30133 1740 27538 253330;253331;253332 201132;201133 201133 0 LLDPQTNTEIANYPIYK Unmodified 1992.0204 0.020407676 5171 Q9Y3P9 RABGAP1 Rab GTPase-activating protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 78.623 78.869 3 0.0051448 90764 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.597 31.385 11450000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11450000 30134 5171 27539 253333 201134 201134 1 LLDPSAEIIVLK Unmodified 1309.7857 0.7857037 3978 Q96RU2 USP28 Ubiquitin carboxyl-terminal hydrolase 28 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 86.167 86.287 2 0.0014896 100084 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 81.338 59.252 20637000 0 0 0 0 0 2884800 0 0 0 4303000 2305700 3298000 1309900 1550300 4984900 30135 3978 27540 253334;253335;253336;253337;253338;253339;253340 201135;201136;201137;201138;201139;201140;201141 201136 7 LLDQEAK Unmodified 815.43888 0.43888309 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 15.531 15.918 2 0.042347 15151 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 67.741 7.3963 22571000 0 0 0 0 0 0 0 0 0 0 11819000 0 10752000 0 0 30136 2291 27541 253341;253342 201142;201143 201142 2 LLDQHDQR Unmodified 1023.5098 0.50975662 1242 P29084 GTF2E2 Transcription initiation factor IIE subunit beta yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 9.5899 9.898 2 0.015746 7717 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.383 29.591 3818200 0 0 0 0 0 0 0 0 0 0 0 2027500 0 0 1790700 30137 1242 27542 253343;253344 201144;201145 201144 2 LLDQIVEK Unmodified 956.55425 0.5542472 3737 Q96AE4 FUBP1 Far upstream element-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 52.675 53.107 2 0.03483 59344 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 52.867 22.363 60735000 0 0 0 0 0 0 0 0 0 0 22634000 0 0 15022000 23079000 30138 3737 27543 253345;253346;253347 201146;201147 201147 2 LLDQQLDQELVK Unmodified 1440.7824 0.78240924 843 P07476 IVL Involucrin yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 74.31 74.113 2 1.5775E-05 85858 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 106.4 71.131 20293000 0 0 0 18082000 0 0 2210500 0 0 0 0 0 0 0 0 30139 843 27544 253348;253349 201148 201148 1 LLDSEIK Unmodified 816.45928 0.45928418 1066 P17980 PSMC3 26S protease regulatory subunit 6A yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 40.678 36.356 2 0.02375 47322 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.11 9.9478 228730000 0 216520000 12205000 0 0 0 0 0 0 0 0 0 0 0 0 30140 1066 27545 253350;253351 201149 201149 1 LLDSESEVR Unmodified 1046.5244 0.52440364 5364 yes yes 0 0 0 By MS/MS 10 0 1 1 42.378 42.44 2 0.050085 47457 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 42.109 10.175 + 2612300 0 0 0 0 0 0 2612300 0 0 0 0 0 0 0 0 30141 5364 27546 253352 201150 201150 1 LLDSITVPVAR Unmodified 1182.6972 0.69722304 128 O00203 AP3B1 AP-3 complex subunit beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.951 77.013 2 1.4372E-05 89115 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 135.79 81.242 335990000 0 0 0 15895000 18408000 26114000 26017000 29679000 16444000 30715000 34218000 34699000 25983000 35289000 42526000 30142 128 27547 253353;253354;253355;253356;253357;253358;253359;253360;253361;253362;253363;253364 201151;201152;201153;201154;201155;201156;201157;201158;201159;201160 201157 8 LLDSLEPPGEPGPSTNIPENDTVDGR Unmodified 2718.2984 0.29843303 3654 Q92734 TFG Protein TFG yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 78.943 79.152 3 0.0032594 91126 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 24.287 21.013 35690000 0 0 0 0 0 0 0 0 0 0 0 8052700 0 0 27637000 30143 3654 27548 253365;253366 201161 201161 1 LLDSLEPPGEPGPSTNIPENDTVDGREEK Unmodified 3104.4786 0.47858224 3654 Q92734 TFG Protein TFG yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.089 75.148 3 5.572E-137 86754 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 170.27 154.28 525170000 0 0 0 7769700 16523000 16706000 19492000 24870000 16156000 51758000 56224000 90744000 23157000 57053000 144720000 30144 3654 27549 253367;253368;253369;253370;253371;253372;253373;253374;253375;253376;253377;253378 201162;201163;201164;201165;201166;201167;201168;201169;201170;201171;201172;201173;201174;201175;201176;201177;201178 201176 17 LLDSQSDQTSK Unmodified 1220.5885 0.58846046 5068 Q9UQ84 EXO1 Exonuclease 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 15.419 15.317 2 1.8932E-05 14968 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 152.97 133.19 113010000 0 8449500 0 4239400 5313400 5700200 7990100 6484800 4453600 6768100 13736000 13775000 12566000 9860400 13676000 30145 5068 27550 253379;253380;253381;253382;253383;253384;253385;253386;253387;253388;253389;253390;253391 201179;201180;201181;201182;201183;201184;201185;201186;201187;201188;201189;201190;201191 201189 13 LLDSSTVTHLFK Unmodified 1359.7398 0.73981614 1819 P60900 PSMA6 Proteasome subunit alpha type-6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.59 3.61 7 2 20 6 2 1 2 1 1 2 2 2 2 2 2 2 2 79.553 77.642 2;3 3.1777E-13 98020 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.76 87.756 2859900000 1469200000 730970000 97336000 16237000 5184800 0 6727000 21406000 9885900 14858000 56859000 56023000 15433000 55509000 304270000 30146 1819 27551 253392;253393;253394;253395;253396;253397;253398;253399;253400;253401;253402;253403;253404;253405;253406;253407;253408;253409;253410;253411;253412;253413;253414;253415;253416;253417;253418;253419;253420 201192;201193;201194;201195;201196;201197;201198;201199;201200;201201;201202;201203;201204;201205;201206;201207;201208;201209;201210;201211;201212;201213;201214 201194 21 LLDSVPPTAISHFK Unmodified 1523.8348 0.83477916 4588 Q9NR30 DDX21 Nucleolar RNA helicase 2 yes yes 0 0 0 By MS/MS 10 0 1 1 73.543 73.647 3 0.007699 85061 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 34.432 25.833 14471000 0 0 0 0 0 0 0 0 0 14471000 0 0 0 0 0 30147 4588 27552 253421 201215 201215 1 LLDSWFTSTQEK Unmodified 1453.7089 0.70890994 3351 Q8N5M9 JAGN1 Protein jagunal homolog 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 79.882 80.024 2 0.00048317 92638 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 79.07 56.984 29212000 0 0 0 0 0 2069300 2345800 3408700 2010500 3861400 2475100 3086200 2298000 2115800 5540800 30148 3351 27553 253422;253423;253424;253425;253426;253427;253428;253429;253430;253431 201216;201217;201218;201219;201220;201221;201222;201223;201224 201220 9 LLDTIGISQPQWR Unmodified 1525.8253 0.8252771 1224 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 2 1 1 1 1 1 1 1 1 81.346 81.35 2 0.00045577 94123 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 94.297 47.453 68578000 0 0 0 2511700 6552800 7872800 4900300 8015000 5443300 8908600 0 9378000 5444000 9551400 0 30149 1224 27554 253432;253433;253434;253435;253436;253437;253438;253439;253440;253441;253442 201225;201226;201227;201228;201229;201230;201231;201232 201225 7 LLDTMVDTFLQK Unmodified 1422.7429 0.74285261 2917 Q6P1K2 PMF1 Polyamine-modulated factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.2 3.92 3 2 1 1 1 1 1 91.786 90.033 2 3.6535E-07 111872 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.66 108.1 29602000 0 26070000 651970 0 0 0 0 829120 0 0 0 0 0 0 2050500 30150 2917 27555 253443;253444;253445;253446;253447 201233;201234;201235 201233 3 LLDTNPEINQSDSQDSR Unmodified 1930.8868 0.88682732 2424 Q14669 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 46.815 46.964 2 2.2805E-38 52701 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 172.99 167.71 61171000 0 0 0 5016400 3303100 7454900 4482700 0 4313400 6889700 9455000 10473000 0 4159800 5622800 30151 2424 27556 253448;253449;253450;253451;253452;253453;253454;253455;253456;253457;253458 201236;201237;201238;201239;201240;201241;201242;201243;201244;201245 201241 10 LLDTPIK Unmodified 798.48511 0.485105 2894 Q6N021 TET2 Methylcytosine dioxygenase TET2 yes yes 0 0 0 By MS/MS 2 0 1 1 54.231 48.425 2 0.03931 62778 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.381 16.118 11696000 0 11696000 0 0 0 0 0 0 0 0 0 0 0 0 0 30152 2894 27557 253459 201246 201246 1 LLDTSTYK Unmodified 939.49131 0.49131259 2500 Q15126 PMVK Phosphomevalonate kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 34.253 33.18 2 0.0079876 36568 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 87.754 58.378 154530000 0 54841000 0 11689000 11241000 20977000 14116000 0 10524000 17313000 0 0 13833000 0 0 30153 2500 27558 253460;253461;253462;253463;253464;253465;253466;253467;253468 201247;201248;201249;201250;201251;201252 201251 6 LLDTVDDMLANDIAR Oxidation (M) 1689.8244 0.82435041 4403 Q9H4M9 EHD1 EH domain-containing protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 79.459 79.538 2 3.4036E-23 92048 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 116.54 89.424 48372000 0 0 0 0 4048900 5629300 0 0 3205900 7713200 10063000 0 2399600 5976900 9336000 30154 4403 27559 253469;253470;253471;253472;253473;253474;253475;253476;253477 201253;201254;201255;201256;201257;201258;201259;201260 201260 5868 8 LLDVESEAK Unmodified 1002.5233 0.523341 3075 Q7Z2Z1 TICRR Treslin yes yes 0 0 0 By MS/MS 10 0 1 1 40.343 40.688 2 0.029817 45439 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 48.423 17.134 3359300 0 0 0 0 0 0 0 0 0 0 0 0 3359300 0 0 30155 3075 27560 253478 201261 201261 1 LLDVIHTENK Unmodified 1180.6452 0.64518747 1180 P24941 CDK2 Cyclin-dependent kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6 4 6 6 2 2 2 1 1 1 1 1 1 51.072 48.226 2;3 5.7238E-05 66881 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 128.36 39.006 939940000 180910000 144500000 383020000 0 0 0 25281000 0 17688000 51730000 0 0 34055000 34562000 68197000 30156 1180 27561 253479;253480;253481;253482;253483;253484;253485;253486;253487;253488;253489;253490 201262;201263;201264;201265;201266;201267 201265 4 LLDVTGGLGTDELR Unmodified 1457.7726 0.77257283 5211 Q9Y4W2 LAS1L Ribosomal biogenesis protein LAS1L yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 79.151 79.248 2 1.0361E-05 91224 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.08 60.659 73108000 0 0 0 0 4519800 0 4892600 0 0 8763900 12112000 8951700 8702100 10764000 14402000 30157 5211 27562 253491;253492;253493;253494;253495;253496;253497;253498;253499 201268;201269;201270;201271;201272;201273;201274;201275 201270 8 LLDVVHPAAK Unmodified 1061.6233 0.62332982 4065 Q99832 CCT7 T-complex protein 1 subunit eta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.85 3.88 1 5 2 12 5 2 1 1 1 1 1 1 1 1 1 1 1 1 1 49.392 48.242 2 1.0779E-05 56741 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 136.75 74.094 4305700000 1766600000 439180000 750240000 98418000 59524000 140490000 85819000 89373000 82382000 111670000 161910000 88204000 142040000 103970000 185870000 30158 4065 27563 253500;253501;253502;253503;253504;253505;253506;253507;253508;253509;253510;253511;253512;253513;253514;253515;253516;253517;253518;253519 201276;201277;201278;201279;201280;201281;201282;201283;201284;201285;201286;201287;201288;201289;201290;201291;201292;201293;201294;201295;201296;201297;201298;201299;201300;201301;201302;201303;201304;201305;201306 201300 29 LLDWIEGK Unmodified 972.52803 0.52803245 234 O14976 GAK Cyclin-G-associated kinase yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 77.227 77.086 2 0.0067419 88354 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.299 48.941 72785000 0 0 3398700 2387300 2959800 5476200 4476100 6222900 5761300 6054000 6998700 5130600 4732600 6384800 12802000 30159 234 27564 253520;253521;253522;253523;253524;253525;253526;253527;253528;253529;253530;253531;253532 201307;201308;201309;201310;201311;201312;201313;201314;201315;201316 201309 9 LLDYLQENPK Unmodified 1231.6449 0.64485312 710 O95999 BCL10 B-cell lymphoma/leukemia 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 63.238 62.2 2 0.0017004 71137 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 89.247 78.382 99968000 5152800 5018000 3316400 3003500 4526800 4917700 4962400 5146900 3512100 6727300 11044000 11092000 6200900 8289100 17059000 30160 710 27565 253533;253534;253535;253536;253537;253538;253539;253540;253541;253542;253543;253544;253545;253546;253547;253548 201317;201318;201319;201320;201321;201322;201323;201324;201325;201326;201327;201328;201329;201330;201331;201332;201333;201334 201318 18 LLDYTEK Unmodified 880.4542 0.45419881 4076 Q99986 VRK1 Serine/threonine-protein kinase VRK1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 34.418 34.523 2 0.049915 37922 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 63.301 38.628 39313000 0 0 0 0 3112700 6076600 4912100 3657600 3982600 5468600 6359700 0 0 5742700 0 30161 4076 27566 253549;253550;253551;253552;253553;253554;253555;253556 201335 201335 1 LLDYVATVEDEAAAAK Unmodified 1677.8461 0.84613171 4584 Q9NR09 BIRC6 Baculoviral IAP repeat-containing protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 82.502 82.63 2 0.0014316 95685 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 64.55 48.297 16249000 0 0 0 0 0 2085200 0 0 2063800 4683100 2639300 4777900 0 0 0 30162 4584 27567 253557;253558;253559;253560;253561 201336;201337 201336 2 LLDYVPIGPR Unmodified 1141.6495 0.64954457 1504 P46459 NSF Vesicle-fusing ATPase yes yes 0 0 0 By MS/MS 10 0 1 1 78.843 78.391 2 0.020711 90762 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 47.082 4.7333 75772000 0 0 0 75772000 0 0 0 0 0 0 0 0 0 0 0 30163 1504 27568 253562 201338 201338 1 LLEAAAQSTK Unmodified 1030.5659 0.56587452 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 24.932 25.047 2 0.0048432 26951 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 71.349 6.3113 125220000 0 0 0 19313000 17134000 0 17723000 0 10003000 17932000 17169000 0 15084000 10866000 0 30164 2501 27569 253563;253564;253565;253566;253567;253568;253569;253570;253571 201339;201340;201341;201342;201343;201344;201345;201346;201347;201348 201347 9 LLEAAITPETK Unmodified 1184.6653 0.66525421 1325 P32929 CTH Cystathionine gamma-lyase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.9 3.81 6 2 12 2 5 1 1 1 1 1 1 1 1 1 1 1 1 1 57.783 55.986 2 8.5288E-07 68466 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 144.77 99.053 2852300000 38585000 2613900000 33608000 4499000 5156600 6246100 3942600 4681600 3556900 8273900 25039000 24380000 3928400 16717000 59799000 30165 1325 27570 253572;253573;253574;253575;253576;253577;253578;253579;253580;253581;253582;253583;253584;253585;253586;253587;253588;253589;253590;253591 201349;201350;201351;201352;201353;201354;201355;201356;201357;201358;201359;201360;201361;201362;201363;201364;201365;201366;201367;201368;201369;201370 201361 21 LLEAASVSSK Unmodified 1003.555 0.55497548 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.943 33.127 2 0.00092577 35164 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 113.18 40.691 399900000 0 0 0 24979000 25285000 27035000 29187000 40038000 23471000 33954000 39786000 50793000 36509000 30544000 38317000 30166 1029 27571 253592;253593;253594;253595;253596;253597;253598;253599;253600;253601;253602;253603 201371;201372;201373;201374;201375;201376;201377;201378;201379;201380;201381 201374 10 LLEACTFHKP Unmodified 1214.6118 0.61177885 85 CON__Q29443;CON__Q0IIK2 yes no 0 0 1 By MS/MS 2 0 1 1 51.365 47.444 3 0.044502 59807 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 54.066 46.141 + 8212300 0 0 8212300 0 0 0 0 0 0 0 0 0 0 0 0 30167 85 27572 253604 201382 201382 1 LLEAETQR Unmodified 958.50836 0.50835964 1802 P58107 EPPK1 Epiplakin yes yes 0 0 0 By MS/MS 10 0 1 1 24.053 23.869 2 0.034963 25501 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 52.786 24.363 10296000 0 0 0 10296000 0 0 0 0 0 0 0 0 0 0 0 30168 1802 27573 253605 201383 201383 1 LLEAFHNQGPVIK Unmodified 1464.8089 0.80889876 5115 Q9Y2R9 MRPS7 28S ribosomal protein S7, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 65.169 64.334 3 0.00065092 73661 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 66.267 48.13 123550000 29960000 0 1522000 4601000 4782800 8976400 0 4667900 6597600 9835800 7562300 11329000 9776900 9946600 13987000 30169 5115 27574 253606;253607;253608;253609;253610;253611;253612;253613;253614;253615;253616;253617;253618 201384;201385;201386;201387;201388;201389;201390;201391;201392;201393;201394 201393 11 LLEAFTER Unmodified 977.5182 0.51819605 3615 Q92538 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 59.487 59.641 2 0.027935 67813 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 57.047 7.6889 36960000 0 0 0 0 3348600 0 3535700 3150100 1780000 4733600 7210100 3679500 4564000 4957900 0 30170 3615 27575 253619;253620;253621;253622;253623;253624;253625;253626;253627 201395;201396;201397 201396 3 LLEAGPTQFTTPLASFTTVASEPPVK Unmodified 2701.4214 0.4214487 4326 Q9H0E9 BRD8 Bromodomain-containing protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 95.309 95.462 3 2.7439E-06 110951 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 41.087 38.259 13230000 0 0 0 0 0 0 0 0 0 5391000 2236600 0 0 0 5602600 30171 4326 27576 253628;253629;253630 201398;201399;201400 201398 3 LLEAHEEQNVDSYTESVK Unmodified 2089.9804 0.98039335 1750 P54920 NAPA Alpha-soluble NSF attachment protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.42 3.66 3 1 8 1 2 1 1 1 1 1 1 1 1 1 55.341 53.492 3 2.4127E-47 65270 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 135.09 132.11 336630000 12844000 162630000 12690000 0 0 21625000 0 0 16404000 0 18899000 21684000 21606000 17167000 31088000 30172 1750 27577 253631;253632;253633;253634;253635;253636;253637;253638;253639;253640;253641;253642 201401;201402;201403;201404;201405;201406;201407;201408;201409;201410;201411;201412;201413;201414 201406 14 LLEAISETSSQLEHAK Unmodified 1754.905 0.90504357 4077 Q99996 AKAP9 A-kinase anchor protein 9 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 2 1 1 1 1 1 1 1 1 70.912 70.423 2;3 0.00017068 86950 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 91.961 81.653 59268000 0 0 24560000 0 1380700 0 3175600 3935800 0 4231700 4794900 0 3702700 3175900 10310000 30173 4077 27578 253643;253644;253645;253646;253647;253648;253649;253650;253651;253652 201415;201416;201417 201417 3 LLEAISSLDGK Unmodified 1144.634 0.63395409 4189 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 71.742 71.437 2 0.00048101 82093 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 83.869 51.028 81988000 0 24716000 0 3317800 3716300 3957100 4042600 4526900 3462600 5307400 4851600 6840800 4428900 4063600 8756500 30174 4189 27579 253653;253654;253655;253656;253657;253658;253659;253660;253661;253662;253663;253664;253665 201418;201419;201420;201421;201422;201423;201424;201425;201426;201427;201428;201429;201430 201424 12 LLEALDEMLTHDIAK Oxidation (M) 1726.8811 0.881137 4777 Q9NZN4 EHD2 EH domain-containing protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 87.547 82.412 3 0.00011572 103943 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.383 55.147 54177000 7939100 44797000 1441000 0 0 0 0 0 0 0 0 0 0 0 0 30175 4777 27580 253666;253667;253668 201431;201432 201431 6142 2 LLEALDEMLTHDIAK Unmodified 1710.8862 0.88622238 4777 Q9NZN4 EHD2 EH domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 98.213 91.78 3 3.8947E-16 115480 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.694 88.226 67517000 48927000 18590000 0 0 0 0 0 0 0 0 0 0 0 0 0 30176 4777 27580 253669;253670 201433;201434 201434 2 LLEAMGTSK Unmodified 948.49502 0.49501776 5181 Q9Y421 FAM32A Protein FAM32A yes yes 0 0 0 By MS/MS 2 0 1 1 39.229 34.218 2 0.00072475 44783 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.61 56.469 27924000 0 27924000 0 0 0 0 0 0 0 0 0 0 0 0 0 30177 5181 27581 253671 201435;201436 201436 2 LLEAQACTGGIIHPTTGQK Unmodified 1994.0255 0.025509829 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 57.642 57.76 3 5.886E-06 65596 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 68.952 58.894 347380000 0 0 0 20922000 23088000 23550000 26374000 27147000 23401000 38710000 33693000 40138000 20029000 25325000 44999000 30178 1029 27582 253672;253673;253674;253675;253676;253677;253678;253679;253680;253681;253682;253683 201437;201438;201439;201440;201441;201442;201443;201444;201445;201446;201447;201448;201449 201438 13 LLEAQIATGGIIDPK Unmodified 1537.8716 0.87155859 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.773 79.831 2 6.9482E-20 92576 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 111.94 96.198 120270000 0 0 0 12996000 7031800 5436100 5603300 12762000 5697500 18457000 12756000 14697000 7408800 8605600 8821900 30179 1029 27583 253684;253685;253686;253687;253688;253689;253690;253691;253692;253693;253694;253695 201450;201451;201452;201453;201454;201455;201456;201457;201458;201459;201460;201461;201462 201461 13 LLEAQSHFRK Unmodified 1227.6724 0.67240528 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 24.03 24.356 3 0.0022945 26030 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 63.216 37.1 28108000000 0 0 0 0 6325900000 0 0 0 0 3606700000 4412900000 5892300000 0 3538700000 4331700000 30180 2344 27584 253696;253697;253698;253699;253700;253701 201463;201464 201463 2 LLEASLEEQGLAVDVGETGPSPPIHSK Unmodified 2772.4182 0.41815424 4691 Q9NW68 BSDC1 BSD domain-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 86.641 78.511 3 4.5132E-34 102335 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.441 85.127 8345000 8345000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30181 4691 27585 253702 201465 201465 1 LLEATELK Unmodified 915.5277 0.5276981 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By matching 10 0 6 1 1 1 1 1 1 47.046 47.431 2 0.017693 54007 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 65.252 15.894 197670000 0 0 0 0 0 28632000 0 13758000 0 29261000 35360000 30283000 0 0 60371000 30182 2344 27586 253703;253704;253705;253706;253707;253708 201466 201466 1 LLECSGRQVSPEALEGK Unmodified 1871.9411 0.9411115 1238 P28715 ERCC5 DNA repair protein complementing XP-G cells yes yes 0 0 1 By MS/MS 2 0 1 1 58.745 54.942 3 0.00027455 68509 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 68.257 57.622 7264100 0 0 7264100 0 0 0 0 0 0 0 0 0 0 0 0 30183 1238 27587 253709 201467;201468 201467 2 LLEDGEDFNLGDALDSSNSMQTIQK Oxidation (M) 2755.2494 0.24943393 814 P05783 KRT18 Keratin, type I cytoskeletal 18 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.8 2.76 2 2 21 4 1 2 2 1 2 2 2 2 2 1 2 2 84.193 83.617 2;3 7.2977E-111 96207 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 164.65 117.82 2005400000 0 177390000 0 1772900 94206000 94133000 71111000 165290000 121090000 337870000 196900000 256110000 71183000 105100000 313280000 30184 814 27588 253710;253711;253712;253713;253714;253715;253716;253717;253718;253719;253720;253721;253722;253723;253724;253725;253726;253727;253728;253729;253730;253731;253732;253733;253734 201469;201470;201471;201472;201473;201474;201475;201476;201477;201478;201479;201480;201481;201482;201483 201480 980 15 LLEDGEDFNLGDALDSSNSMQTIQK Unmodified 2739.2545 0.2545193 814 P05783 KRT18 Keratin, type I cytoskeletal 18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.46 3.84 4 2 7 1 5 1 1 1 1 1 1 1 88.385 86.191 2;3 4.856E-145 106199 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 250.52 246.35 414590000 8130200 339870000 0 0 4303200 0 1887200 5432400 0 17244000 9368800 0 0 2257200 26096000 30185 814 27588 253735;253736;253737;253738;253739;253740;253741;253742;253743;253744;253745;253746;253747 201484;201485;201486;201487;201488;201489;201490;201491;201492;201493;201494;201495 201486 12 LLEDRIAEFTTNLTEEEEK Unmodified 2279.1169 0.11688684 1356 P35579 MYH9 Myosin-9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.33 0.471 6 3 3 5 1 89.563 84.746 2;3 2.7281E-86 106907 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 207.79 152.34 994040000 806710000 184870000 2455500 0 0 0 0 0 0 0 0 0 0 0 0 30186 1356 27589 253748;253749;253750;253751;253752;253753;253754;253755;253756 201496;201497;201498;201499;201500;201501;201502;201503 201497 8 LLEDSALSK Unmodified 974.52843 0.52842638 3856 Q96GM5 SMARCD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 40.584 39.917 2 0.009035 44821 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 67.897 22.179 426720000 0 98243000 0 0 30148000 34543000 35689000 28982000 27799000 47847000 42886000 0 34739000 19650000 26196000 30187 3856 27590 253757;253758;253759;253760;253761;253762;253763;253764;253765;253766;253767;253768 201504;201505;201506 201505 3 LLEDSEESSEETVSR Unmodified 1708.7639 0.76391822 384 O60231 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.877 38.058 2 2.1276E-59 41672 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 208.72 181.24 232700000 0 0 0 14526000 13658000 19077000 15400000 14498000 13207000 19820000 24365000 31292000 19263000 15800000 31799000 30188 384 27591 253769;253770;253771;253772;253773;253774;253775;253776;253777;253778;253779;253780 201507;201508;201509;201510;201511;201512;201513;201514;201515;201516;201517;201518 201516 12 LLEDTLFPSSK Unmodified 1248.6602 0.66016884 3897 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 76.871 76.204 2 1.9342E-05 87483 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 125.97 50.589 605400000 0 231230000 7311200 22548000 22741000 28888000 25851000 23384000 26131000 37911000 34469000 38668000 28255000 28806000 49208000 30189 3897 27592 253781;253782;253783;253784;253785;253786;253787;253788;253789;253790;253791;253792;253793;253794;253795;253796 201519;201520;201521;201522;201523;201524;201525;201526;201527;201528;201529;201530;201531;201532;201533 201522 11 LLEEALLR Unmodified 955.57023 0.57023162 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 1 1 2 2 2 2 2 1 2 2 2 70.608 70.733 2 0.0040192 81025 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 146.21 83.492 764050000 0 0 0 32152000 33462000 50868000 44916000 48910000 29667000 73568000 68720000 109360000 66141000 75872000 130410000 30190 1986 27593 253797;253798;253799;253800;253801;253802;253803;253804;253805;253806;253807;253808;253809;253810;253811;253812;253813;253814;253815;253816 201534;201535;201536;201537;201538;201539;201540;201541;201542;201543;201544;201545;201546;201547;201548;201549;201550 201543 17 LLEEAQLQDLEK Unmodified 1427.7508 0.75077476 4641 Q9NU22 MDN1 Midasin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.338 72.417 2 1.3992E-10 83218 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 145.34 131.22 134960000 0 0 0 7160900 7967900 0 8464100 11461000 9089900 18092000 14788000 23000000 11327000 10481000 13127000 30191 4641 27594 253817;253818;253819;253820;253821;253822;253823;253824;253825;253826;253827;253828 201551;201552;201553;201554;201555;201556;201557;201558;201559;201560;201561;201562;201563 201558 12 LLEEDTPR Unmodified 971.49238 0.49237523 659 O95425 SVIL Supervillin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 29.641 29.702 2 0.011282 32482 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 77.282 42.458 26864000 0 0 0 0 3543000 2674100 3747500 2687700 3950700 4162500 0 0 6098100 0 0 30192 659 27595 253829;253830;253831;253832;253833;253834;253835 201564;201565;201566;201567;201568;201569;201570 201570 7 LLEEDVK Unmodified 844.4542 0.45419881 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.12 2.32 1 7 1 1 1 1 1 1 1 1 29.655 29.347 2 0.023406 30733 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.866 14.917 451740000 0 20364000 0 0 0 39670000 47861000 0 0 57043000 63044000 0 51880000 53648000 118230000 30193 965 27596 253836;253837;253838;253839;253840;253841;253842;253843 201571;201572 201571 2 LLEEEDSK Unmodified 961.46041 0.4604064 3784 Q96CT7 CCDC124 Coiled-coil domain-containing protein 124 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 16.758 17.011 2 0.011003 15696 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 77.923 6.5801 16115000 0 0 0 0 0 0 2397000 0 0 0 0 0 0 5953500 7764300 30194 3784 27597 253844;253845;253846 201573;201574 201574 2 LLEEEEK Unmodified 888.44403 0.44402805 4205;2746 Q9BW85;Q5M775 CCDC94;SPECC1 Coiled-coil domain-containing protein 94;Cytospin-B no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 18.772 18.088 2 0.021131 21711 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.61 59.039 232910000 0 196520000 0 8181600 0 0 12449000 8501500 7263800 0 0 0 0 0 0 30195 4205;2746 27598 253847;253848;253849;253850;253851 201575;201576;201577 201576 3 LLEEEIIAFSK Unmodified 1290.7071 0.70711903 4799 Q9P0V9 SEPT10 Septin-10 yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 84.127 84.288 2 0.0052215 97676 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 70.1 48.636 13722000 0 0 0 0 0 0 0 0 0 4985100 5542200 0 0 0 3195000 30196 4799 27599 253852;253853;253854 201578;201579 201579 2 LLEEEIQAPTSSK Unmodified 1443.7457 0.74568938 3366 Q8N7H5 PAF1 RNA polymerase II-associated factor 1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.25 3.34 2 1 1 2 1 1 57.537 53.96 2 2.6917E-09 61596 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 138.99 1.9857 1004000000 0 875890000 3479200 0 0 0 0 0 0 0 0 0 0 124620000 0 30197 3366 27600 253855;253856;253857;253858 201580;201581;201582;201583 201583 4 LLEEENQESLR Unmodified 1358.6678 0.66777341 1549 P48681 NES Nestin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 40.274 40.618 2 0.0029574 44851 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 79.974 40.952 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30198 1549 27601 253859;253860;253861;253862;253863 201584;201585;201586;201587;201588 201588 5 LLEEESSK Unmodified 933.46549 0.46549177 4890 Q9UH65 SWAP70 Switch-associated protein 70 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 15.702 15.342 2 0.0066594 14228 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.997 66.642 320080000 0 125580000 0 8540400 7141100 13641000 13427000 11618000 7151200 16467000 25076000 19235000 16990000 25099000 30109000 30199 4890 27602 253864;253865;253866;253867;253868;253869;253870;253871;253872;253873;253874;253875;253876;253877 201589;201590;201591;201592;201593;201594;201595;201596;201597 201591 8 LLEEFRQTQQVPPNK Unmodified 1825.9686 0.96864688 2895 Q6N069 NAA16 N-alpha-acetyltransferase 16, NatA auxiliary subunit yes yes 0 0 1 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 2 2 1 1 2 1 1 55.566 55.633 3 6.8672E-05 62961 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.022 57.387 116550000 0 0 0 1830300 3422000 9432500 11280000 5910400 12660000 22410000 20006000 29598000 0 0 0 30200 2895 27603 253878;253879;253880;253881;253882;253883;253884;253885;253886;253887;253888;253889 201598;201599;201600;201601;201602;201603;201604;201605;201606;201607;201608;201609 201608 10 LLEEGVLR Unmodified 927.53893 0.53893149 2940 Q6P996 PDXDC1 Pyridoxal-dependent decarboxylase domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 53.537 53.631 2 0.025549 61789 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 58.604 8.4779 434540000 0 0 0 29432000 25722000 37249000 0 35282000 28350000 56167000 56591000 63443000 61341000 40959000 0 30201 2940 27604 253890;253891;253892;253893;253894;253895;253896;253897;253898;253899 201610;201611;201612;201613;201614 201614 4 LLEEHAK Unmodified 838.45487 0.45486751 1660 P51572 BCAP31 B-cell receptor-associated protein 31 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 8.7586 8.8778 2 0.043924 6458 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.035 23.969 16603000 0 0 0 2308700 1509700 191360 0 822850 0 1963500 6650900 0 0 836120 2319700 30202 1660 27605 253900;253901;253902;253903;253904;253905;253906;253907 201615 201615 1 LLEELEEGQK Unmodified 1186.6081 0.60813326 2585;2279 Q13404;Q15819 UBE2V1;UBE2V2 Ubiquitin-conjugating enzyme E2 variant 1;Ubiquitin-conjugating enzyme E2 variant 2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.087 52.233 2 0.00055195 60187 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 128.38 113.13 949350000 0 0 0 38576000 23191000 130430000 42363000 43451000 33656000 86393000 116660000 109660000 53509000 74023000 197430000 30203 2279;2585 27606 253908;253909;253910;253911;253912;253913;253914;253915;253916;253917;253918;253919 201616;201617;201618;201619;201620;201621;201622;201623;201624;201625;201626;201627;201628;201629;201630 201629 14 LLEELLK Unmodified 856.52697 0.52696982 5102 Q9Y2H2 INPP5F Phosphatidylinositide phosphatase SAC2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.892 74.955 2 0.026498 86353 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 78.616 0 78479000 0 0 0 2734800 5795300 5621000 4292400 5556800 4622500 6412200 9558700 9192600 6265500 6559500 11868000 30204 5102 27607 253920;253921;253922;253923;253924;253925;253926;253927;253928;253929;253930;253931 201631;201632;201633;201634 201632 4 LLEELLNK Unmodified 970.5699 0.56989727 3909 Q96KP1 EXOC2 Exocyst complex component 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 3 9 1 1 1 1 1 1 1 1 1 1 1 1 73.508 72.284 2 0.02179 87796 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 84.244 28.803 161600000 6474500 86736000 19052000 0 2943100 4428600 3740200 4264700 3646000 7477700 0 5972000 0 8589300 8277300 30205 3909 27608 253932;253933;253934;253935;253936;253937;253938;253939;253940;253941;253942;253943 201635;201636;201637;201638;201639;201640;201641;201642 201640 8 LLEENETEAVTVPTPSPTPVR Unmodified 2278.1693 0.16925676 4906 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 10 0 17 2 1 2 2 1 2 2 1 1 2 1 76.076 76.172 2;3 0.00085138 87977 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 56.482 49.28 74462000 0 0 0 0 5058700 3268000 5197900 7407500 4134800 14703000 11810000 6251400 2903100 7598500 6129000 30206 4906 27609 253944;253945;253946;253947;253948;253949;253950;253951;253952;253953;253954;253955;253956;253957;253958;253959;253960 201643;201644 201643 2 LLEENVSAFK Unmodified 1148.6077 0.60773933 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 61.917 60.534 2 4.9454E-05 77203 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.23 65.415 1641200000 34177000 1123700000 23586000 0 26005000 38715000 35027000 34463000 24212000 50838000 48515000 53729000 44749000 39754000 63702000 30207 4634 27610 253961;253962;253963;253964;253965;253966;253967;253968;253969;253970;253971;253972;253973;253974;253975 201645;201646;201647;201648;201649;201650;201651;201652;201653;201654;201655;201656;201657;201658;201659;201660 201648 16 LLEEQGIFLR Unmodified 1216.6816 0.68157298 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 77.97 78.235 2 0.0020277 89944 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 102.51 36.256 17393000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17393000 30208 2775 27611 253976;253977;253978 201661;201662;201663 201662 3 LLEERLK Unmodified 899.54402 0.54401687 961 P12081 HARS Histidine--tRNA ligase, cytoplasmic yes no 0 0 1 By MS/MS By MS/MS By matching 2.4 0.49 3 2 2 2 1 35.771 30.897 2 0.034038 43580 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 132.09 0 856630000 730620000 125080000 932230 0 0 0 0 0 0 0 0 0 0 0 0 30209 961 27612 253979;253980;253981;253982;253983 201664;201665 201665 0 LLEERTLK Unmodified 1000.5917 0.59169534 455 O75116 ROCK2 Rho-associated protein kinase 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 34.14 29.348 2 0.028553 41323 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 140.09 48.189 123140000 86273000 24916000 11950000 0 0 0 0 0 0 0 0 0 0 0 0 30210 455 27613 253984;253985;253986 201666 201666 0 LLEESIANLNR Unmodified 1270.6881 0.68811492 775 P04150 NR3C1 Glucocorticoid receptor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 67.388 66.735 2 5.6173E-75 76495 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 204.36 141.82 543770000 0 19233000 3011200 0 38666000 42275000 39860000 55127000 36006000 56977000 0 76239000 65814000 47500000 63063000 30211 775 27614 253987;253988;253989;253990;253991;253992;253993;253994;253995;253996;253997;253998;253999 201667;201668;201669;201670;201671;201672;201673;201674;201675;201676;201677;201678;201679;201680;201681 201668 14 LLEESIANLNRSTSVPENPK Unmodified 2210.1543 0.1542754 775 P04150 NR3C1 Glucocorticoid receptor yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 74.573 70.752 3 2.0682E-08 86370 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 76.151 67.054 58083000 0 36799000 21284000 0 0 0 0 0 0 0 0 0 0 0 0 30212 775 27615 254000;254001;254002 201682;201683;201684;201685;201686;201687 201687 6 LLEETQLDMNEFDNLLQPIIDTCTK Unmodified 2992.4409 0.44093987 3249 Q8IWX8 CHERP Calcium homeostasis endoplasmic reticulum protein yes yes 0 0 0 By MS/MS 2 0 1 1 101.08 96.371 3 9.6169E-79 119095 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.93 132.28 42701000 0 42701000 0 0 0 0 0 0 0 0 0 0 0 0 0 30213 3249 27616 254003 201688 201688 1 LLEEYGSDDTRNVK Unmodified 1637.7897 0.78967946 1517 P46939 UTRN Utrophin yes yes 0 0 1 By MS/MS 3 0 1 1 41.634 36.896 3 0.043877 45976 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 32.068 27.177 2653400 0 2653400 0 0 0 0 0 0 0 0 0 0 0 0 0 30214 1517 27617 254004 201689 201689 1 LLEFDQLQLQK Unmodified 1373.7555 0.7554662 246 O15056 SYNJ2 Synaptojanin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 82.191 82.3 2 0.011977 95284 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 56.563 36.776 18324000 0 0 0 0 1172200 0 0 1541100 2367700 3243300 2086900 2401100 0 0 5512200 30215 246 27618 254005;254006;254007;254008;254009;254010;254011 201690;201691 201690 2 LLEFQLALK Unmodified 1073.6485 0.64848194 1313 P31948 STIP1 Stress-induced-phosphoprotein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 2 1 1 91.506 86.747 2 0.0074041 109672 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.28 55.566 97919000 52520000 43964000 1435000 0 0 0 0 0 0 0 0 0 0 0 0 30216 1313 27619 254012;254013;254014;254015 201692;201693;201694;201695 201694 3 LLEFYDATAHFAK Unmodified 1524.7613 0.76127986 2005 P83436 COG7 Conserved oligomeric Golgi complex subunit 7 yes yes 0 0 0 By matching By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 78.307 78.45 3 0.018754 90250 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.054 25.542 19172000 0 0 0 0 0 4234000 1548700 1401200 0 0 0 0 0 1718800 10269000 30217 2005 27620 254016;254017;254018;254019;254020 201696 201696 1 LLEGAPTEDTLVQMEK Oxidation (M) 1788.8815 0.88153093 3445 Q8NFG4 FLCN Folliculin yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 70.015 64.776 2 0.00020126 82678 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.731 71.986 21734000 0 21734000 0 0 0 0 0 0 0 0 0 0 0 0 0 30218 3445 27621 254021;254022 201697 201697 4989 1 LLEGAPTEDTLVQMEK Unmodified 1772.8866 0.88661631 3445 Q8NFG4 FLCN Folliculin yes yes 0 0 0 By MS/MS 2 0 1 1 80.377 75.665 2 0.00040095 94227 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.204 62.426 66416000 0 66416000 0 0 0 0 0 0 0 0 0 0 0 0 0 30219 3445 27621 254023 201698 201698 1 LLEGEDAHLSSQQASGQSYSSR Unmodified 2349.0833 0.083295297 70 CON__P08779;P08779 KRT16 Keratin, type I cytoskeletal 16 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 2 1 1 1 2 1 1 1 1 2 1 1 44.452 44.564 2;3 0 49796 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 226.51 223.07 + 1284300000 0 0 0 158150000 41823000 27545000 32051000 141060000 19580000 93417000 0 31115000 664790000 58654000 16138000 30220 70 27622 254024;254025;254026;254027;254028;254029;254030;254031;254032;254033;254034;254035;254036;254037;254038 201699;201700;201701;201702;201703;201704;201705;201706;201707;201708;201709;201710;201711;201712;201713;201714;201715;201716;201717;201718;201719;201720;201721;201722;201723;201724 201714 26 LLEGEDAHLSSSQFSSGSQSSR Unmodified 2308.0567 0.056746196 56;97 CON__P02533;P02533;CON__Q61782 KRT14 Keratin, type I cytoskeletal 14 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 34 4 2 3 3 4 2 4 3 2 3 2 2 53.614 53.716 2;3 1.4538E-191 60325 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 210.38 197.71 + 5214000000 0 0 0 817350000 203910000 267340000 197920000 773050000 132470000 463630000 421400000 381020000 1100700000 188950000 266280000 30221 56;97 27623 254039;254040;254041;254042;254043;254044;254045;254046;254047;254048;254049;254050;254051;254052;254053;254054;254055;254056;254057;254058;254059;254060;254061;254062;254063;254064;254065;254066;254067;254068;254069;254070;254071;254072 201725;201726;201727;201728;201729;201730;201731;201732;201733;201734;201735;201736;201737;201738;201739;201740;201741;201742;201743;201744;201745;201746;201747;201748;201749;201750;201751;201752;201753;201754;201755;201756;201757 201728 33 LLEGEDAHLSSSQFSSGSQSSRDVTSSSR Unmodified 3040.397 0.39697788 56 CON__P02533;P02533 KRT14 Keratin, type I cytoskeletal 14 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 2 1 1 1 1 53.207 52.969 3;4 1.4026E-36 59911 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 84.933 31.38 + 48253000 0 0 0 23684000 4225600 0 4652900 10001000 5689900 0 0 0 0 0 0 30222 56 27624 254073;254074;254075;254076;254077;254078 201758;201759;201760;201761;201762;201763 201759 6 LLEGEDAHLTQYK Unmodified 1515.7569 0.75692277 84 CON__Q04695;Q04695 KRT17 Keratin, type I cytoskeletal 17 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 1 2 2 2 2 2 2 49.067 49.225 2;3 2.4856E-75 55449 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 202.16 177.28 + 1629600000 0 0 0 350640000 70205000 84525000 87650000 132850000 42734000 78415000 86149000 99485000 475380000 67001000 54555000 30223 84 27625 254079;254080;254081;254082;254083;254084;254085;254086;254087;254088;254089;254090;254091;254092;254093;254094;254095;254096;254097;254098;254099;254100;254101 201764;201765;201766;201767;201768;201769;201770;201771;201772;201773;201774;201775;201776;201777;201778;201779;201780;201781;201782;201783;201784;201785 201776 20 LLEGEDAHLTQYKK Unmodified 1643.8519 0.85188578 84 CON__Q04695;Q04695 KRT17 Keratin, type I cytoskeletal 17 yes no 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 4 1 1 2 40.97 41.202 3;4 0.0001775 45957 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 67.234 50.885 + 111230000 0 0 0 14309000 0 0 0 0 0 0 0 10231000 86687000 0 0 30224 84 27626 254102;254103;254104;254105 201786;201787;201788 201786 3 LLEGEECR Unmodified 1004.4597 0.45969489 79;74;66;58;779;80;100;2056;83;53;105 CON__P35908v2;P35908;CON__P35908;P04259;CON__P50446;CON__Q8BGZ7;CON__Q01546;Q01546;CON__P13647;P13647;CON__Q7RTT2;CON__Q8N1N4-2;Q8N1N4;CON__O95678;O95678;CON__P02538;P02538;CON__P04259 KRT2;KRT6B;KRT76;KRT5;KRT78;KRT75;KRT6A Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 2 oral;Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 78;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 6A no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.474 21.678 2 2.5395E-05 22340 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 157.52 106.55 + 13930000000 0 0 0 3547400000 699480000 885120000 810030000 1010600000 480410000 1389900000 939120000 961640000 1908100000 872950000 425690000 30225 79;779;80;105;83;2056;74;100;53;58;66 27627 254106;254107;254108;254109;254110;254111;254112;254113;254114;254115;254116;254117 201789;201790;201791;201792;201793;201794;201795;201796;201797;201798;201799;201800;201801;201802;201803 201794 14 LLEGEECRMSGDLSSNVTVSVTSSTISSNVASK Oxidation (M) 3459.6345 0.63450731 79 CON__P35908v2;P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 1 1 By MS/MS 2 0 1 1 79.409 71.279 3 1.3661E-41 93643 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.654 87.623 + 13597000 13597000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30226 79 27628 254118 201804 201804 116 1 LLEGEECRMSGDLSSNVTVSVTSSTISSNVASK Unmodified 3443.6396 0.63959269 79 CON__P35908v2;P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 0 1 By MS/MS 2 0 1 1 82.954 74.824 3 1.8337E-62 97908 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.9 102.88 + 11194000 11194000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30227 79 27628 254119 201805 201805 1 LLEGEEER Unmodified 973.47164 0.47163978 757;1111;2094 P02545;P20700;Q03252 LMNA;LMNB1;LMNB2 Prelamin-A/C;Lamin-A/C;Lamin-B1;Lamin-B2 no no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.856 21.061 2 0.036499 20486 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 51.854 38.647 584060000 0 0 0 45969000 21843000 40118000 29615000 33226000 22177000 49889000 63177000 66381000 44614000 67040000 100020000 30228 757;1111;2094 27629 254120;254121;254122;254123;254124;254125;254126;254127;254128;254129;254130;254131 201806;201807;201808 201807 1 LLEGEEERLK Unmodified 1214.6507 0.65066678 1111;2094 P20700;Q03252 LMNB1;LMNB2 Lamin-B1;Lamin-B2 no no 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.18 3.74 3 1 7 2 2 1 1 1 1 1 1 1 38.745 37.206 2;3 3.8357E-05 46516 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 105.98 64.981 198890000 0 66989000 68778000 8660000 6789000 6802000 6772200 6860900 5100300 0 0 22134000 0 0 0 30229 1111;2094 27630 254132;254133;254134;254135;254136;254137;254138;254139;254140;254141;254142 201809;201810;201811;201812;201813;201814;201815;201816;201817;201818;201819;201820;201821;201822 201818 13 LLEGEEERLR Unmodified 1242.6568 0.65681479 757 P02545 LMNA Prelamin-A/C;Lamin-A/C yes yes 0 0 1 By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 38.792 39.106 3 0.013356 42342 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 45.598 27.859 395100000 0 0 0 0 0 24000000 27816000 26228000 18440000 42461000 48671000 53694000 32075000 34054000 87660000 30230 757 27631 254143;254144;254145;254146;254147;254148;254149;254150;254151;254152 201823;201824 201824 2 LLEGEEQR Unmodified 972.48762 0.4876242 81 CON__Q6NT21;CON__P78385;P78385 KRT83 Keratin, type II cuticular Hb3 no no 0 0 0 By MS/MS 10 0 1 1 18.946 19.11 2 0.036102 19255 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 86.953 32.404 + 48567000 0 0 0 0 0 0 0 48567000 0 0 0 0 0 0 0 30231 81 27632 254153 201825 201825 0 LLEGEESR Unmodified 931.46108 0.4610751 870;67;69;88;107;98 P08670;P41219;CON__P05787;P05787;CON__Q9H552;CON__P08729;CON__Q3KNV1;P08729;CON__Q6ISB0;CON__Q9NSB2;Q9NSB2;CON__Q9DCV7 VIM;PRPH;KRT8;KRT7;KRT84 Vimentin;Peripherin;Keratin, type II cytoskeletal 8;Keratin, type II cytoskeletal 7;Keratin, type II cuticular Hb4 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 2 1 1 2 2 1 2 1 1 2 2 1 21.751 21.917 2 0.006389 19059 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 101.28 34.291 + 9892800000 0 0 0 496830000 821700000 756290000 741430000 624110000 464850000 1099400000 882170000 1167100000 797760000 773360000 1267800000 30232 870;67;69;88;98;107 27633 254154;254155;254156;254157;254158;254159;254160;254161;254162;254163;254164;254165;254166;254167;254168;254169;254170;254171 201826;201827;201828;201829;201830;201831;201832;201833;201834;201835;201836;201837;201838;201839 201827 13 LLEGEESRLESGMQNMSIHTK 2 Oxidation (M) 2420.1312 0.13117347 67 CON__P05787;P05787 KRT8 Keratin, type II cytoskeletal 8 yes no 0 2 1 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 1 1 1 2 2 2 1 2 1 2 1 45.658 45.865 3;4 1.0666E-09 50285 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.953 66.563 + 1800100000 0 0 0 31547000 47996000 68803000 61485000 208930000 162930000 293800000 86439000 284150000 192160000 194500000 167370000 30233 67 27634 254172;254173;254174;254175;254176;254177;254178;254179;254180;254181;254182;254183;254184;254185;254186;254187;254188 201840;201841;201842;201843;201844;201845;201846;201847;201848;201849;201850;201851 201843 77;78 12 LLEGEESRLESGMQNMSIHTK Oxidation (M) 2404.1363 0.13625885 67 CON__P05787;P05787 KRT8 Keratin, type II cytoskeletal 8 yes no 0 1 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.79 2.87 5 28 3 2 1 2 4 1 3 3 2 4 2 2 4 57.59 56.79 3;4 2.5238E-13 63010 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.55 67.159 + 498150000 139320000 0 12978000 3799700 6689900 31705000 5373500 0 20115000 44424000 22013000 62910000 22561000 17793000 108470000 30234 67 27634 254189;254190;254191;254192;254193;254194;254195;254196;254197;254198;254199;254200;254201;254202;254203;254204;254205;254206;254207;254208;254209;254210;254211;254212;254213;254214;254215;254216;254217;254218;254219;254220;254221 201852;201853;201854;201855;201856;201857;201858;201859;201860;201861;201862;201863 201855 77;78 9 LLEGEESRLESGMQNMSIHTK Unmodified 2388.1413 0.14134422 67 CON__P05787;P05787 KRT8 Keratin, type II cytoskeletal 8 yes no 0 0 1 By MS/MS By MS/MS By matching By MS/MS 5.25 3.7 3 2 3 3 2 1 2 75.086 71.638 3;4 8.8408E-18 92077 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.49 60.979 + 319550000 95191000 152650000 0 0 0 0 0 0 0 3723800 0 0 0 0 67989000 30235 67 27634 254222;254223;254224;254225;254226;254227;254228;254229 201864;201865;201866;201867;201868;201869 201868 4 LLEGEEYR Unmodified 1007.4924 0.49237523 77;960 P12035;CON__P19013;P19013 KRT3;KRT4 Keratin, type II cytoskeletal 3;Keratin, type II cytoskeletal 4 no no 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 34.238 34.421 2 0.0064875 37658 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 100.45 54.733 + 284620000 0 0 0 0 0 0 97807000 146220000 0 0 0 0 40592000 0 0 30236 960;77 27635 254230;254231;254232 201870;201871;201872;201873 201871 4 LLEGESEGTREESK Unmodified 1562.7424 0.74239491 106 Q9C075;CON__Q9C075 KRT23 Keratin, type I cytoskeletal 23 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 18.916 19.076 3 0.00041169 19566 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 51.546 46.491 + 58572000 0 0 0 24844000 2616800 3058600 2580900 7913300 1664500 3759400 3056200 3731500 3787300 1560000 0 30237 106 27636 254233;254234;254235;254236;254237;254238;254239;254240;254241;254242;254243 201874;201875;201876 201875 3 LLEGHVPEEAGLK Unmodified 1390.7456 0.7456298 3226 Q8IVF2 AHNAK2 Protein AHNAK2 yes yes 0 0 0 By MS/MS 2 0 1 1 57.421 53.595 3 0.024478 66764 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 36 14.369 18013000 0 0 18013000 0 0 0 0 0 0 0 0 0 0 0 0 30238 3226 27637 254244 201877 201877 1 LLEGIGLENLDSPAATK Unmodified 1739.9305 0.93053004 467 O75165 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 83.008 82.979 2 0.0020945 96097 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 47.712 35.846 3585000 0 0 0 0 2103200 0 0 0 1481800 0 0 0 0 0 0 30239 467 27638 254245;254246 201878 201878 1 LLEGPVPEEVGLK Unmodified 1378.7708 0.77078192 3226 Q8IVF2 AHNAK2 Protein AHNAK2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 76.543 75.878 2 0.00060479 87562 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 76.228 46.418 160540000 0 74154000 2165400 3417700 5144900 4717500 6763500 5625800 5909800 8269500 8437800 11642000 6632200 6711800 10944000 30240 3226 27639 254247;254248;254249;254250;254251;254252;254253;254254;254255;254256;254257;254258;254259;254260;254261 201879;201880;201881;201882;201883;201884;201885;201886;201887;201888;201889;201890;201891;201892;201893 201881 15 LLEGTIVNVPEK Unmodified 1310.7446 0.74456717 573 O76031 CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 71.083 70.363 2 2.5504E-05 88020 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.24 85.558 238960000 0 109710000 1315100 6298800 8379100 9400200 10475000 10238000 9205500 9984800 11789000 14917000 11145000 8385800 17716000 30241 573 27640 254262;254263;254264;254265;254266;254267;254268;254269;254270;254271;254272;254273;254274;254275;254276 201894;201895;201896;201897;201898;201899;201900;201901;201902;201903;201904;201905;201906;201907;201908;201909 201898 16 LLEHSFIK Unmodified 985.55967 0.55966693 206 O14733 MAP2K7 Dual specificity mitogen-activated protein kinase kinase 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 46.933 47.195 2 0.006867 51553 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.195 50.281 89689000 0 0 0 0 3693800 0 9770400 6619500 8335800 0 10376000 13322000 13840000 7965500 15767000 30242 206 27641 254277;254278;254279;254280;254281;254282;254283;254284;254285 201910;201911;201912;201913;201914;201915;201916 201911 7 LLEHYGK Unmodified 858.45995 0.45995289 4900 Q9UHF7 TRPS1 Zinc finger transcription factor Trps1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 22.563 18.674 2 0.027725 23637 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 97.071 52.46 30747000 20660000 0 10086000 0 0 0 0 0 0 0 0 0 0 0 0 30243 4900 27642 254286;254287 201917 201917 1 LLEIDIDGVFK Unmodified 1260.6966 0.69655434 895 P09884 POLA1 DNA polymerase alpha catalytic subunit yes yes 0 0 0 By MS/MS 2 0 1 1 96.183 88.052 2 0.00042932 113620 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.15 47.804 27486000 27486000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30244 895 27643 254288 201918;201919 201918 2 LLEIDPYLK Unmodified 1102.6274 0.62741214 2101 Q04446 GBE1 1,4-alpha-glucan-branching enzyme yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 81.201 80.408 2 0.011388 97538 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 85.064 39.346 102620000 0 29621000 2209300 0 0 5358100 0 3112700 0 0 11645000 11214000 0 9322300 30134000 30245 2101 27644 254289;254290;254291;254292;254293;254294;254295;254296 201920;201921;201922;201923;201924;201925 201924 6 LLEIPDPDK Unmodified 1038.5597 0.55972651 1096 P19838 NFKB1 Nuclear factor NF-kappa-B p105 subunit;Nuclear factor NF-kappa-B p50 subunit yes yes 0 0 0 By MS/MS 2 0 1 1 71.31 65.493 2 0.007722 83105 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.02 63.622 54456000 0 54456000 0 0 0 0 0 0 0 0 0 0 0 0 0 30246 1096 27645 254297 201926 201926 1 LLEIQGK Unmodified 799.48035 0.48035398 4973 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 42.251 37.068 2 0.025641 48576 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.919 10.017 360260000 15598000 338380000 6278700 0 0 0 0 0 0 0 0 0 0 0 0 30247 4973 27646 254298;254299;254300 201927 201927 1 LLEIVSYK Unmodified 963.56408 0.56408361 3702 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.399 68.478 2 0.0082674 79071 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 86.794 31.353 224980000 0 0 0 12297000 12750000 16414000 16048000 12504000 11989000 24316000 22470000 27642000 17709000 16792000 34050000 30248 3702 27647 254301;254302;254303;254304;254305;254306;254307;254308;254309;254310;254311;254312 201928;201929;201930;201931;201932;201933;201934;201935;201936;201937;201938;201939 201939 12 LLELDPEHQR Unmodified 1248.6463 0.64625011 983 P13674 P4HA1 Prolyl 4-hydroxylase subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 1 1 2 48.727 48.887 2;3 0.0023795 54465 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 75.387 57.328 142360000 0 0 0 6210800 5090900 8238500 10165000 9839500 8915300 12686000 16131000 19759000 10056000 11451000 23819000 30249 983 27648 254313;254314;254315;254316;254317;254318;254319;254320;254321;254322;254323;254324;254325 201940;201941;201942;201943;201944;201945 201945 6 LLELDPEHQRANGNLK Unmodified 1845.9697 0.96970951 983 P13674 P4HA1 Prolyl 4-hydroxylase subunit alpha-1 yes yes 0 0 1 By MS/MS 2 0 1 1 60.968 52.727 3 0.0008766 71426 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.268 42.882 10557000 10557000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30250 983 27649 254326 201946;201947 201946 2 LLELDSFLK Unmodified 1076.6118 0.61176208 1844 P61289 PSME3 Proteasome activator complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.39 3.7 5 1 12 1 4 1 1 1 1 1 1 1 1 1 1 1 1 1 90.207 89.091 2 0.0030604 103695 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 91.853 74.56 1960900000 166390000 1284900000 122120000 5917100 10097000 35408000 14911000 17883000 15073000 46927000 39680000 32049000 17654000 32651000 119260000 30251 1844 27650 254327;254328;254329;254330;254331;254332;254333;254334;254335;254336;254337;254338;254339;254340;254341;254342;254343;254344 201948;201949;201950;201951;201952;201953;201954;201955;201956;201957;201958;201959;201960;201961;201962;201963;201964;201965;201966;201967;201968;201969;201970 201966 22 LLELEQDASSAK Unmodified 1302.6667 0.66671078 3107 Q7Z5K2 WAPAL Wings apart-like protein homolog yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 51.998 52.096 2 0.0020674 57961 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 117.67 69.849 195050000 0 0 0 9071200 0 25002000 11460000 49643000 14840000 24632000 28101000 0 16509000 15791000 0 30252 3107 27651 254345;254346;254347;254348;254349;254350;254351;254352;254353 201971;201972;201973;201974;201975;201976 201974 0 LLELFPVNR Unmodified 1099.639 0.63897988 5280 Q9Y6E2 BZW2 Basic leucine zipper and W2 domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 83.992 84.058 2 0.003216 97375 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 90.777 55.421 165440000 0 0 0 7255900 8155200 12096000 10720000 7628500 11332000 17512000 17224000 25955000 15106000 10922000 21536000 30253 5280 27652 254354;254355;254356;254357;254358;254359;254360;254361;254362;254363;254364;254365 201977;201978;201979;201980;201981;201982;201983;201984;201985;201986;201987;201988;201989;201990 201988 14 LLELGPKPEVAQQTR Unmodified 1677.9414 0.94136949 1721 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.292 58.407 3 2.4931E-10 66392 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 96.414 55.322 299140000 0 0 0 14938000 15296000 19058000 24684000 18121000 12714000 29068000 35343000 37426000 27655000 24234000 40602000 30254 1721 27653 254366;254367;254368;254369;254370;254371;254372;254373;254374;254375;254376;254377 201991;201992;201993;201994;201995;201996;201997;201998;201999;202000;202001;202002;202003;202004 201998 14 LLELLPGK Unmodified 881.5586 0.5586043 3357 Q8N684 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75.209 74.224 2 0.0068946 85328 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 91.906 48.992 1858900000 270590000 256760000 65434000 69241000 73520000 63329000 97222000 103230000 93905000 118080000 127370000 111610000 97189000 107820000 203570000 30255 3357 27654 254378;254379;254380;254381;254382;254383;254384;254385;254386;254387;254388;254389;254390;254391;254392 202005;202006;202007;202008;202009;202010;202011;202012;202013;202014;202015;202016;202017;202018 202006 14 LLELLWNK Unmodified 1027.6066 0.60661712 3684 Q92905 COPS5 COP9 signalosome complex subunit 5 yes yes 0 0 0 By MS/MS By matching By MS/MS 7.33 3.77 1 2 1 1 1 87.431 84.84 2 0.0062194 98573 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 102.72 54.215 24008000 7349000 0 0 0 0 0 0 0 2905000 0 0 0 0 0 13754000 30256 3684 27655 254393;254394;254395 202019;202020 202019 2 LLELNGHTQK Unmodified 1151.6299 0.62987176 4484 Q9HAD4 WDR41 WD repeat-containing protein 41 yes yes 0 0 0 By MS/MS 2 0 1 1 35.649 32.264 3 0.01935 40858 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 68.626 47.178 14134000 0 0 14134000 0 0 0 0 0 0 0 0 0 0 0 0 30257 4484 27656 254396 202021 202021 0 LLELQELVLR Unmodified 1224.7442 0.74417324 2156 Q08379 GOLGA2 Golgin subfamily A member 2 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 90.872 90.97 2 0.0024982 105360 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.005 53.196 5540700 0 0 0 0 0 788790 0 0 0 2127700 0 0 0 0 2624200 30258 2156 27657 254397;254398;254399 202022;202023 202023 2 LLELTSSYSPDVSDYK Unmodified 1815.8778 0.87782576 1397 P38432 COIL Coilin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 78.422 78.128 2 7.9026E-16 95728 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145.31 133.74 144310000 0 54178000 0 0 6372300 8515200 4437700 8032000 7003900 11325000 11095000 8551800 4880400 8085000 11831000 30259 1397 27658 254400;254401;254402;254403;254404;254405;254406;254407;254408;254409;254410;254411 202024;202025;202026;202027;202028;202029;202030;202031;202032;202033;202034;202035;202036;202037 202027 13 LLEMLQSK Unmodified 960.5314 0.53140327 3217;250 Q8IUD2;O15083 ERC1;ERC2 ELKS/Rab6-interacting/CAST family member 1;ERC protein 2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 62.57 60.389 2 0.0089203 68783 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 84.568 41.444 98657000 28872000 50608000 0 0 0 2389800 0 0 0 5542500 4301500 0 0 0 6943400 30260 3217;250 27659 254412;254413;254414;254415;254416;254417;254418 202038;202039;202040;202041;202042;202043;202044;202045 202039 8 LLEMMEEVQSLQEK Unmodified 1705.8267 0.82665859 4292 Q9C0I1 MTMR12 Myotubularin-related protein 12 yes yes 0 0 0 By MS/MS 2 0 1 1 90.046 85.149 2 0.0052169 105802 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.695 40.84 13425000 0 13425000 0 0 0 0 0 0 0 0 0 0 0 0 0 30261 4292 27660 254419 202046 202046 0 LLENEQVQK Unmodified 1099.5873 0.58733824 3242 Q8IWJ2 GCC2 GRIP and coiled-coil domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 8.12 3.26 1 1 6 2 1 1 1 1 1 1 26.497 25.516 2 0.0012532 32000 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.54 59.429 99217000 0 80860000 0 0 2945000 2767300 2202200 0 1426700 0 0 0 0 3567000 5448400 30262 3242 27661 254420;254421;254422;254423;254424;254425;254426;254427 202047;202048;202049 202048 3 LLENISPADVGGMEETR Oxidation (M) 1845.8778 0.87784254 3615 Q92538 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 68.275 68.38 2 1.2145E-08 78473 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 104.87 98.68 31120000 0 0 0 4473500 0 0 0 0 0 0 0 12242000 0 5598500 8805700 30263 3615 27662 254428;254429;254430;254431;254432;254433;254434 202050;202051;202052;202053;202054;202055;202056 202053 5112 6 LLENMNK Oxidation (M) 876.4375 0.43750288 2965 Q6QNY1 BLOC1S2 Biogenesis of lysosome-related organelles complex 1 subunit 2 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 10.733 10.923 2 0.032192 9804 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 64.776 13.811 9478900 0 0 0 0 0 0 1459100 0 740720 1649400 0 0 1703300 1303000 2623300 30264 2965 27663 254435;254436;254437;254438;254439;254440 202057 202057 1 LLENMQSDLR Unmodified 1217.6074 0.60742176 3087 Q7Z3U7 MON2 Protein MON2 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 56.574 56.798 2 0.0095689 64571 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 95.358 60.002 2564500 0 0 0 0 0 0 0 0 0 0 0 0 2564500 0 0 30265 3087 27664 254441;254442;254443 202058;202059;202060 202058 3 LLENMTEVVR Unmodified 1202.6329 0.63290823 2940 Q6P996 PDXDC1 Pyridoxal-dependent decarboxylase domain-containing protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 67.694 68.211 2 0.0071865 77580 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.076 20.206 5691300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5691300 30266 2940 27665 254444 202061 202061 1 LLENMTEVVRK Oxidation (M) 1346.7228 0.72278587 2940 Q6P996 PDXDC1 Pyridoxal-dependent decarboxylase domain-containing protein 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 33.386 33.528 3 0.002957 35987 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 47.844 28.285 135930000 0 0 0 13763000 9030700 16494000 13980000 11527000 0 23058000 0 19604000 0 13273000 15199000 30267 2940 27666 254445;254446;254447;254448;254449;254450;254451;254452;254453 202062;202063;202064;202065;202066;202067;202068 202067 4576 1 LLENMTEVVRK Unmodified 1330.7279 0.72787125 2940 Q6P996 PDXDC1 Pyridoxal-dependent decarboxylase domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 19 1 2 2 1 2 2 2 2 2 1 2 57.367 57.516 2;3 8.6576E-06 65591 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 103.34 74.001 845680000 0 0 0 33234000 32554000 89670000 39900000 70334000 73407000 95810000 86105000 110690000 0 69476000 144500000 30268 2940 27666 254454;254455;254456;254457;254458;254459;254460;254461;254462;254463;254464;254465;254466;254467;254468;254469;254470;254471;254472 202069;202070;202071;202072;202073;202074;202075;202076;202077;202078;202079;202080;202081;202082 202076 11 LLENPTINHQK Unmodified 1305.7041 0.70409934 2476 Q15021 NCAPD2 Condensin complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 2 2 2 2 1 1 2 2 1 1 1 31.46 31.638 2;3 0.0013435 33822 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 111.95 73.155 347800000 0 0 0 14393000 27180000 44085000 21895000 20488000 15939000 32351000 31211000 51827000 20309000 25487000 42639000 30269 2476 27667 254473;254474;254475;254476;254477;254478;254479;254480;254481;254482;254483;254484;254485;254486;254487;254488;254489;254490 202083;202084;202085;202086;202087;202088;202089;202090;202091;202092;202093;202094 202091 6 LLENSTLNSK Unmodified 1117.5979 0.59790293 5285 Q9Y6I4 USP3 Ubiquitin carboxyl-terminal hydrolase 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 32.941 32.426 2 1.1987E-05 41211 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 133.57 46.251 492800000 0 138510000 0 27135000 28666000 26595000 25227000 22616000 23579000 32933000 47425000 35233000 33330000 19254000 32307000 30270 5285 27668 254491;254492;254493;254494;254495;254496;254497;254498;254499;254500;254501;254502;254503;254504 202095;202096;202097;202098;202099;202100;202101;202102;202103;202104;202105;202106 202098 11 LLEPADMVLLSVPDK Oxidation (M) 1654.8852 0.88515975 3321 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 84.847 85.006 2 0.00016024 98488 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 68.536 43.744 27209000 0 0 0 0 0 0 3063500 5029800 0 5537300 3321600 0 0 4036800 6219900 30271 3321 27669 254505;254506;254507;254508;254509;254510;254511 202107;202108;202109;202110;202111;202112;202113 202107 4911 7 LLEPGAAEPAER Unmodified 1251.6459 0.64591575 2857 Q68DC2 ANKS6 Ankyrin repeat and SAM domain-containing protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 40.915 41.468 2 0.015906 45800 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 51.092 32.312 16389000 0 0 0 0 0 0 0 0 0 4808200 0 6295600 0 0 5284800 30272 2857 27670 254512;254513;254514 202114 202114 1 LLEPLVTQVTTLVNTNSK Unmodified 1969.1096 0.10955703 1340 P35221 CTNNA1 Catenin alpha-1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 93.058 93.186 3 0.0059408 107989 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 31.883 0.42151 4894600 0 0 0 0 0 0 0 0 0 1499800 0 0 0 0 3394800 30273 1340 27671 254515;254516 202115 202115 1 LLEPPNFFQK Unmodified 1231.6601 0.66010926 4213 Q9BWT3 PAPOLG Poly(A) polymerase gamma yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.45 3.29 1 1 9 2 1 1 1 1 1 1 1 1 1 81.597 81.456 2 1.3056E-05 103491 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 126.28 94.906 38637000 6952600 0 0 0 0 2081600 2622700 3689200 2814000 2989000 4724300 4877400 0 2420300 5465400 30274 4213 27672 254517;254518;254519;254520;254521;254522;254523;254524;254525;254526;254527 202116;202117 202117 2 LLEPSDMVLLAIPDK Oxidation (M) 1668.9008 0.90080981 3418 Q8NDI1 EHBP1 EH domain-binding protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 86.927 87.058 2 0.00046079 100936 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 62.408 38.064 17205000 0 0 0 0 0 0 0 0 0 3572800 4126100 2322300 2029000 1982600 3171900 30275 3418 27673 254528;254529;254530;254531;254532;254533;254534 202118;202119;202120;202121;202122;202123 202118 4963 6 LLEPSDMVLLAIPDK Unmodified 1652.9059 0.90589519 3418 Q8NDI1 EHBP1 EH domain-binding protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 95.287 95.434 2 0.01275 110676 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.765 28.874 1800300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1800300 30276 3418 27673 254535 202124 202124 1 LLEPSVGSLFGDDEDDDLFSSAK Unmodified 2455.1278 0.12784545 2840;5195 Q641Q2;Q9Y4E1 FAM21A;FAM21C WASH complex subunit FAM21A;WASH complex subunit FAM21C no no 0 0 0 By MS/MS By MS/MS By MS/MS 2.75 0.433 1 3 1 2 1 96.373 93.236 2;3 1.1047E-18 111702 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 125.89 121.34 30056000 1554200 21088000 7414200 0 0 0 0 0 0 0 0 0 0 0 0 30277 2840;5195 27674 254536;254537;254538;254539 202125;202126;202127;202128 202127 4 LLEPVDHGK Unmodified 1006.5447 0.54474515 3041 Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 25.133 24.195 2 0.0030483 24897 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 91.318 20.406 567780000 13899000 77891000 41412000 26905000 27998000 32977000 34461000 29655000 23481000 42303000 35470000 54448000 38419000 33784000 54682000 30278 3041 27675 254540;254541;254542;254543;254544;254545;254546;254547;254548;254549;254550;254551;254552;254553;254554;254555 202129;202130;202131;202132;202133;202134;202135;202136;202137;202138;202139;202140;202141;202142;202143 202140 15 LLEPVLLLGK Unmodified 1093.7111 0.71108219 1879 P62249 RPS16 40S ribosomal protein S16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 90.987 89.733 2 1.1129E-05 113622 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 135.83 103.9 4998400000 2584000000 1037500000 376810000 32029000 59493000 66028000 43975000 70555000 50977000 108670000 91469000 125140000 71197000 98380000 182180000 30279 1879 27676 254556;254557;254558;254559;254560;254561;254562;254563;254564;254565;254566;254567;254568;254569;254570;254571;254572 202144;202145;202146;202147;202148;202149;202150;202151;202152;202153;202154;202155;202156;202157;202158;202159;202160;202161;202162;202163 202152 19 LLEPVVCMSDMLR 2 Oxidation (M) 1593.7565 0.75647054 5026 Q9UN37 VPS4A Vacuolar protein sorting-associated protein 4A yes yes 0 2 0 By MS/MS 10 0 1 1 69.541 69.823 2 0.012659 80256 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 48.64 30.328 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30280 5026 27677 254573 202164 202164 6366;6367 1 LLEPVVSMSDMLR 2 Oxidation (M) 1520.7579 0.75785074 484 O75351 VPS4B Vacuolar protein sorting-associated protein 4B yes yes 0 2 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 68.911 68.808 2 0.0022247 78836 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 46.606 28.742 8851000 0 0 0 3109100 0 0 3326800 0 0 0 0 0 0 2415100 0 30281 484 27678 254574;254575;254576 202165;202166 202165 607;608 2 LLEPVVSMSDMLR Unmodified 1488.768 0.7680215 484 O75351 VPS4B Vacuolar protein sorting-associated protein 4B yes yes 0 0 0 By MS/MS 10 0 1 1 90.141 90.28 2 0.012516 104540 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.001 16.062 2828000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2828000 30282 484 27678 254577 202167 202167 1 LLEQALK Unmodified 813.496 0.49600404 4021 Q99543 DNAJC2 DnaJ homolog subfamily C member 2;DnaJ homolog subfamily C member 2, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 44.105 39.584 2 0.042806 51179 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.454 10.021 174130000 0 157980000 16159000 0 0 0 0 0 0 0 0 0 0 0 0 30283 4021 27679 254578;254579 202168 202168 1 LLEQGLR Unmodified 827.4865 0.48650199 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 27 3 3 1 2 2 2 1 2 2 3 3 3 34.832 35.006 2 0.024251 39013 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 99.511 0 2054900000 0 0 0 114760000 99419000 214950000 110120000 82762000 71364000 147230000 208830000 229910000 178250000 182620000 414690000 30284 1565 27680 254580;254581;254582;254583;254584;254585;254586;254587;254588;254589;254590;254591;254592;254593;254594;254595;254596;254597;254598;254599;254600;254601;254602;254603;254604;254605;254606 202169;202170;202171;202172;202173;202174;202175;202176 202175 5 LLEQLQEIGQEK Unmodified 1426.7668 0.76675917 2689 Q4V328 GRIPAP1 GRIP1-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 1 1 6 2 1 1 1 1 1 1 74.509 73.495 2 2.4944E-05 91304 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 132.32 83.525 113640000 0 36762000 0 0 0 0 0 0 0 9619300 11374000 21130000 0 8285700 26465000 30285 2689 27681 254607;254608;254609;254610;254611;254612;254613;254614 202177;202178;202179;202180;202181;202182;202183;202184;202185 202178 9 LLEQRAQYVEK Unmodified 1375.746 0.74596415 2945 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 5 2 1 2 38.33 33.334 2;3 0.0037695 46490 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 100.48 64.533 359210000 314690000 27031000 17489000 0 0 0 0 0 0 0 0 0 0 0 0 30286 2945 27682 254615;254616;254617;254618;254619 202186;202187;202188 202187 2 LLEQYKEESK Unmodified 1265.6503 0.65033243 2046 Q00839 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 26.053 26.163 3 0.002518 27807 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 65.5 41.209 314820000 0 0 0 45428000 58000000 0 41478000 33686000 0 35021000 0 79273000 0 21934000 0 30287 2046 27683 254620;254621;254622;254623;254624;254625;254626;254627;254628 202189;202190;202191;202192;202193;202194;202195;202196;202197 202189 7 LLEQYKEESKK Unmodified 1393.7453 0.74529545 2046 Q00839 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 0 0 2 By MS/MS 10 0 1 1 20.902 20.638 3 0.0039245 21459 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 84.198 67.255 8970900 0 0 0 0 8970900 0 0 0 0 0 0 0 0 0 0 30288 2046 27684 254629 202198 202198 1 LLERGELK Unmodified 956.56548 0.56548059 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 29.871 25.459 2 0.047836 35782 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 113.5 32.385 193980000 172180000 0 21799000 0 0 0 0 0 0 0 0 0 0 0 0 30289 643 27685 254630;254631 202199 202199 0 LLERLPEVEVPQHL Unmodified 1670.9356 0.93555583 2082 Q02818 NUCB1 Nucleobindin-1 yes yes 0 0 1 By MS/MS By MS/MS 6 4 1 1 1 1 85.019 81.055 3 0.0046801 104067 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.864 31.78 62701000 50840000 0 0 0 0 0 0 0 0 0 0 0 0 0 11861000 30290 2082 27686 254632;254633 202200;202201 202201 2 LLERVPIPVK Unmodified 1162.7438 0.74377931 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 68.715 68.163 3 0.0095895 77118 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 50.791 24.674 453940000 34841000 0 0 21892000 15430000 37491000 29266000 25693000 34235000 38747000 37785000 49897000 36413000 37472000 54782000 30291 528 27687 254634;254635;254636;254637;254638;254639;254640;254641;254642;254643;254644;254645;254646 202202;202203;202204;202205;202206;202207;202208;202209;202210;202211 202209 10 LLERVSAIASEGK Unmodified 1371.7722 0.7721789 3580 Q8WX92 NELFB Negative elongation factor B yes yes 0 0 1 By MS/MS 2 0 1 1 64.129 55.85 3 0.031569 75284 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.532 29.908 10228000 10228000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30292 3580 27688 254647 202212 202212 0 LLESDYFR Unmodified 1041.5131 0.51311067 3866 Q96HE7 ERO1L ERO1-like protein alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 62.396 62.472 2 0.025549 70459 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.604 21.584 61337000 0 0 0 3714300 2644600 4529500 3574500 0 0 0 6811300 10932000 5200100 6919900 17011000 30293 3866 27689 254648;254649;254650;254651;254652;254653;254654;254655;254656 202213;202214;202215;202216;202217 202213 5 LLESDYFRYYK Unmodified 1495.7347 0.73473076 3866 Q96HE7 ERO1L ERO1-like protein alpha yes yes 0 0 1 By MS/MS 2 0 1 1 78.906 70.775 3 0.013191 92993 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.343 41.363 6126000 6126000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30294 3866 27690 254657 202218 202218 1 LLESEAVNENLRK Unmodified 1513.81 0.81002097 3101 Q7Z4S6 KIF21A Kinesin-like protein KIF21A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.27 3.19 3 2 17 1 3 1 1 2 2 1 1 1 2 1 2 2 2 45.531 44.35 2;3 5.748E-15 49575 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 169.93 134.49 599340000 14122000 71333000 91370000 20568000 0 46315000 32895000 30949000 22560000 34459000 44632000 48763000 46792000 25104000 69477000 30295 3101 27691 254658;254659;254660;254661;254662;254663;254664;254665;254666;254667;254668;254669;254670;254671;254672;254673;254674;254675;254676;254677;254678;254679 202219;202220;202221;202222;202223;202224;202225;202226;202227;202228;202229;202230;202231;202232;202233;202234;202235;202236;202237;202238;202239;202240;202241;202242 202234 23 LLESEECR Unmodified 1034.4703 0.47025958 109;91 CON__Q9R0H5;CON__Q3SY84;Q3SY84 KRT71 Keratin, type II cytoskeletal 71 no no 0 0 0 By MS/MS 10 0 1 1 20.336 20.674 2 0.016731 21462 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 66.799 27.257 + 12765000 0 0 0 0 0 0 0 0 0 0 0 0 12765000 0 0 30296 109;91 27692 254680 202243 202243 1 LLESEESR Unmodified 961.47164 0.47163978 96 CON__Q5XKE5;Q5XKE5 KRT79 Keratin, type II cytoskeletal 79 no no 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 17.844 17.718 2 0.014414 17741 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 70.525 39.963 + 47106000 0 0 0 43246000 2288400 1571800 0 0 0 0 0 0 0 0 0 30297 96 27693 254681;254682;254683 202244;202245 202244 2 LLESGDLSMSSIK Unmodified 1378.7014 0.70138172 193 O14617 AP3D1 AP-3 complex subunit delta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 72.22 71.506 2 1.8361E-10 89065 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 137.17 78.491 309540000 0 203900000 2631300 4660100 4841300 9691600 5923800 8463200 5305100 10221000 8258100 7383500 7554400 9543700 21164000 30298 193 27694 254684;254685;254686;254687;254688;254689;254690;254691;254692;254693;254694;254695;254696;254697;254698 202246;202247;202248;202249;202250;202251;202252;202253;202254;202255;202256;202257;202258;202259;202260;202261;202262 202249 17 LLESGDLSMSSIK Oxidation (M) 1394.6963 0.69629635 193 O14617 AP3D1 AP-3 complex subunit delta-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.17 3.85 2 1 3 2 1 1 1 1 56.606 54.317 2 4.153E-05 68719 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.752 62.561 139120000 0 108550000 2803400 0 0 0 0 0 4984800 0 8925100 0 0 13860000 0 30299 193 27694 254699;254700;254701;254702;254703;254704 202263;202264;202265;202266 202264 263 4 LLESISNSSSNIHK Unmodified 1527.7893 0.78928553 3899 Q96JY0 MAEL Protein maelstrom homolog yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 56.676 56.992 3 0.0013131 64913 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 47.915 4.371 27587000 0 0 0 0 0 4917900 0 0 0 5883400 0 5912400 0 3485600 7387700 30300 3899 27695 254705;254706;254707;254708;254709 202267 202267 1 LLESLDQLELR Unmodified 1327.7347 0.73473076 693 O95816 BAG2 BAG family molecular chaperone regulator 2 yes yes 0 0 0 By MS/MS 10 0 1 1 83.02 83.211 2 0.0001441 96089 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 125.48 65.68 35287000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35287000 30301 693 27696 254710 202268;202269 202269 2 LLESPGVEAGEGEAEK Unmodified 1613.7784 0.77844607 2909 Q6NYC8 PPP1R18 Phostensin yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 50.145 44.844 2 9.9752E-39 58076 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.45 131.79 18681000 0 18681000 0 0 0 0 0 0 0 0 0 0 0 0 0 30302 2909 27697 254711;254712 202270;202271 202270 2 LLESQEPAHAQPASPQNVLPVK Unmodified 2352.2438 0.24375911 3088 Q7Z3V4 UBE3B Ubiquitin-protein ligase E3B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 6.25 3.77 1 1 2 2 1 1 70.096 67.58 3 4.4651E-20 86863 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.67 67.047 38005000 0 30240000 0 0 2497500 0 0 0 0 5267900 0 0 0 0 0 30303 3088 27698 254713;254714;254715;254716 202272;202273;202274;202275;202276 202273 5 LLESQLQSQK Unmodified 1172.6401 0.6401021 5204 Q9Y4I1 MYO5A Unconventional myosin-Va yes yes 0 0 0 By MS/MS 10 0 1 1 35.851 35.399 2 0.0088751 39339 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 58.981 15.173 2329400 0 0 0 0 2329400 0 0 0 0 0 0 0 0 0 0 30304 5204 27699 254717 202277 202277 1 LLETECPQYIR Unmodified 1420.7021 0.70205043 797 P05109 S100A8 Protein S100-A8;Protein S100-A8, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.619 58.732 2 2.3938E-05 67387 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 130.96 92.66 874130000 0 0 0 616790000 32145000 13226000 21814000 21254000 12151000 21841000 31971000 39543000 23065000 18507000 21826000 30305 797 27700 254718;254719;254720;254721;254722;254723;254724;254725;254726;254727;254728;254729 202278;202279;202280;202281;202282;202283;202284;202285;202286;202287;202288;202289;202290;202291;202292;202293 202290 16 LLETECPQYIRK Unmodified 1548.797 0.79701344 797 P05109 S100A8 Protein S100-A8;Protein S100-A8, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.08 2.5 2 1 22 2 1 2 2 2 2 2 2 1 2 2 1 2 2 47.476 47.031 2;3 3.5013E-09 53041 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 137.89 117.47 2492700000 0 17003000 7387900 1644800000 79971000 90775000 55416000 45773000 60014000 8827400 140810000 137230000 81766000 50197000 72762000 30306 797 27701 254730;254731;254732;254733;254734;254735;254736;254737;254738;254739;254740;254741;254742;254743;254744;254745;254746;254747;254748;254749;254750;254751;254752;254753;254754 202294;202295;202296;202297;202298;202299;202300;202301;202302;202303;202304;202305;202306;202307;202308;202309;202310;202311;202312;202313;202314;202315;202316;202317;202318 202313 23 LLETELLQEISEIEK Unmodified 1785.9612 0.96116146 3500 Q8TDB6 DTX3L E3 ubiquitin-protein ligase DTX3L yes yes 0 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 1 3 99.499 94.272 2 2.4676E-41 117862 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 187.85 158.05 39379000 12426000 26953000 0 0 0 0 0 0 0 0 0 0 0 0 0 30307 3500 27702 254755;254756;254757;254758 202319;202320;202321 202321 2 LLETGTGPLHDEK Unmodified 1408.7198 0.71980898 37;3836 A8MPP1;Q92771;Q96FC9 DDX11L8;DDX12P;DDX11 Putative ATP-dependent RNA helicase DDX11-like protein 8;Putative ATP-dependent RNA helicase DDX12;Probable ATP-dependent RNA helicase DDX11 no no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.472 40.65 3 3.5406E-05 45637 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 68.171 54.478 115640000 0 0 0 9041100 5809700 11926000 6809900 9938000 11311000 11447000 8486100 8537100 11950000 10174000 10207000 30308 37;3836 27703 254759;254760;254761;254762;254763;254764;254765;254766;254767;254768;254769;254770 202322;202323;202324;202325;202326;202327;202328;202329;202330;202331;202332 202322 10 LLETHIHNQGLAAIEK Unmodified 1785.9737 0.97373226 2328 Q13616 CUL1 Cullin-1 yes yes 0 0 0 By MS/MS By MS/MS 2.4 0.49 3 2 3 2 66.282 59.802 3;4 1.1913E-18 80108 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 120.24 87.508 150500000 110140000 40361000 0 0 0 0 0 0 0 0 0 0 0 0 0 30309 2328 27704 254771;254772;254773;254774;254775 202333;202334;202335 202335 2 LLETIDQLYLEYAK Unmodified 1710.908 0.90800368 971 P12814 ACTN1 Alpha-actinin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 2 3 1 96.964 92.472 2 0.0012618 114896 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.94 75.55 190740000 43493000 145710000 1532000 0 0 0 0 0 0 0 0 0 0 0 0 30310 971 27705 254776;254777;254778;254779;254780;254781 202336;202337;202338;202339 202336 3 LLETKPEFLK Unmodified 1216.7067 0.7067251 4615 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 68.717 62.754 3 0.0023633 80972 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.692 78.729 90886000 46907000 31933000 12045000 0 0 0 0 0 0 0 0 0 0 0 0 30311 4615 27706 254782;254783;254784 202340;202341;202342 202340 3 LLETPSTLHDQK Unmodified 1380.7249 0.72489436 3909 Q96KP1 EXOC2 Exocyst complex component 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 6 4 3 3 1 1 1 1 1 1 40.979 38.504 3 0.00015012 50228 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.124 61.031 138080000 16260000 49094000 42757000 0 0 13809000 0 0 3053300 0 0 13106000 0 0 0 30312 3909 27707 254785;254786;254787;254788;254789;254790 202343;202344;202345;202346;202347 202344 4 LLETQDGAEK Unmodified 1102.5506 0.55061839 3403 Q8NBT2 SPC24 Kinetochore protein Spc24 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 19.896 20.081 2 0.0020595 20513 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 86.67 36.544 121590000 0 0 0 12546000 10236000 0 13069000 10625000 7131900 0 17164000 0 14853000 11927000 24035000 30313 3403 27708 254791;254792;254793;254794;254795;254796;254797;254798;254799;254800 202348;202349;202350;202351;202352;202353 202351 6 LLETTDRPDGHQNNLR Unmodified 1877.9344 0.93438664 2457 Q14974 KPNB1 Importin subunit beta-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 25 2 2 3 2 2 2 2 2 2 2 2 2 30.436 30.618 3;4 5.4554E-56 33135 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 163.27 136.54 3142400000 0 0 0 95153000 92353000 338060000 149940000 164690000 139860000 234870000 263320000 460240000 273410000 303970000 626500000 30314 2457 27709 254801;254802;254803;254804;254805;254806;254807;254808;254809;254810;254811;254812;254813;254814;254815;254816;254817;254818;254819;254820;254821;254822;254823;254824;254825 202354;202355;202356;202357;202358;202359;202360;202361;202362;202363;202364;202365;202366;202367;202368;202369;202370;202371;202372;202373;202374;202375;202376;202377;202378;202379;202380;202381 202360 26 LLETTEEDK Unmodified 1076.5237 0.52373493 3042 Q7L0Y3 TRMT10C Mitochondrial ribonuclease P protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 22.926 21.193 2 0.005211 22639 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 80.165 32.422 53608000 0 47248000 0 0 0 0 0 0 0 0 0 6359600 0 0 0 30315 3042 27710 254826;254827;254828 202382;202383;202384 202384 3 LLEVDLK Unmodified 828.49567 0.49566969 2260 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 61.069 61.167 2 0.023725 69534 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 84.244 0 153120000 0 0 0 9013600 11843000 0 0 0 11747000 0 25253000 27911000 16378000 16394000 34580000 30316 2260 27711 254829;254830;254831;254832;254833;254834;254835;254836 202385;202386;202387;202388;202389;202390 202386 6 LLEVEHPAAK Unmodified 1105.6132 0.61315906 1067 P17987 TCP1 T-complex protein 1 subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 4 2 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 33.558 32.032 2 4.6258E-05 40406 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 138.1 83.548 2053300000 102570000 710870000 672720000 26124000 22776000 61135000 31810000 32058000 19921000 49062000 58652000 77200000 28515000 51041000 108890000 30317 1067 27712 254837;254838;254839;254840;254841;254842;254843;254844;254845;254846;254847;254848;254849;254850;254851;254852;254853;254854 202391;202392;202393;202394;202395;202396;202397;202398;202399;202400;202401;202402;202403;202404;202405;202406;202407;202408;202409;202410;202411;202412;202413;202414;202415;202416;202417 202398 25 LLEVLSGER Unmodified 1014.571 0.5709599 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS 10 0 1 1 62.208 62.38 2 0.04347 71568 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 60.436 3.1554 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30318 2047 27713 254855 202418 202418 1 LLEVLSGERLPKPTK Unmodified 1678.9982 0.99815609 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 2 By MS/MS By matching By MS/MS 10 0 3 1 1 1 68.144 68.336 3 0.021107 77716 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.995 31.081 12392000 0 0 0 0 0 2941700 0 0 0 1474300 0 0 0 0 7976200 30319 2047 27714 254856;254857;254858 202419 202419 1 LLEVQGSRPGK Unmodified 1182.6721 0.67207093 1872 P62136 PPP1CA Serine/threonine-protein phosphatase PP1-alpha catalytic subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 1 2 2 1 1 1 2 2 2 2 2 27.713 27.971 2;3 0.010791 29815 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 47.361 24.135 261380000 0 0 0 11862000 8973700 16092000 15106000 8111000 8652000 14370000 37924000 45501000 18763000 20333000 55697000 30320 1872 27715 254859;254860;254861;254862;254863;254864;254865;254866;254867;254868;254869;254870;254871;254872;254873;254874;254875;254876;254877 202420;202421;202422;202423;202424;202425 202421 2 LLEVQPQVANSPSSAAQK Unmodified 1865.9847 0.98469087 3418 Q8NDI1 EHBP1 EH domain-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.56 1 1 13 2 1 1 1 2 1 1 1 1 1 1 1 1 56.621 56.247 2;3 3.0242E-58 70768 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 155.98 141.3 102930000 0 43226000 0 3845600 4148700 4489600 7181000 4036600 3507300 6472000 6615200 0 5634900 8017200 5752500 30321 3418 27716 254878;254879;254880;254881;254882;254883;254884;254885;254886;254887;254888;254889;254890;254891;254892 202426;202427;202428;202429;202430;202431;202432;202433;202434;202435;202436;202437;202438;202439;202440;202441 202431 15 LLEVQSQVEELQK Unmodified 1541.8301 0.83008771 3174 Q86VS8 HOOK3 Protein Hook homolog 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 70.297 70.374 2 1.1628E-08 80950 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 129.16 71.558 22432000 0 0 0 0 2318600 0 2466300 2238600 0 4873900 4187500 0 3910300 2436300 0 30322 3174 27717 254893;254894;254895;254896;254897;254898;254899;254900;254901 202442;202443;202444;202445;202446;202447;202448;202449 202443 8 LLEVVQPCLQAAK Unmodified 1467.8119 0.81193523 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.08 3.33 2 1 9 2 1 1 1 1 1 1 1 1 1 1 75.874 74.546 2 4.7049E-08 86099 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 103.78 75.384 322550000 0 293030000 1851200 0 3141700 3982400 0 0 0 5945400 0 0 0 4552000 10048000 30323 3119 27718 254902;254903;254904;254905;254906;254907;254908;254909;254910;254911;254912;254913 202450;202451;202452;202453;202454;202455;202456;202457;202458;202459;202460 202450 11 LLEVYDQLFK Unmodified 1266.686 0.68598966 533 O75694 NUP155 Nuclear pore complex protein Nup155 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 87.169 87.27 2 0.0029838 100840 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.149 64.154 50091000 0 0 0 0 2232900 4836200 0 5153100 3077300 7476500 4607000 3319100 2899400 4188100 12301000 30324 533 27719 254914;254915;254916;254917;254918;254919;254920;254921;254922;254923 202461;202462;202463;202464;202465;202466 202463 3 LLEYEPRSGEQVPLLLK Unmodified 1983.1041 0.10407773 4359 Q9H269 VPS16 Vacuolar protein sorting-associated protein 16 homolog yes yes 0 0 1 By MS/MS 2 0 1 1 88.444 80.313 3 0.00018184 104499 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.918 40.268 9458800 9458800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30325 4359 27720 254924 202467 202467 1 LLEYMPLPPEEAENGENAGNEEPK Oxidation (M) 2685.2116 0.21159186 4278 Q9BZZ5 API5 Apoptosis inhibitor 5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 72.511 72.608 3 6.404E-18 83624 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 81.373 77.779 92491000 0 0 0 0 10946000 11265000 12224000 0 7230000 15817000 5059200 0 6743000 9967300 13241000 30326 4278 27721 254925;254926;254927;254928;254929;254930;254931;254932;254933;254934 202468;202469;202470;202471;202472;202473;202474;202475 202469 5735 7 LLEYMPLPPEEAENGENAGNEEPK Unmodified 2669.2167 0.21667724 4278 Q9BZZ5 API5 Apoptosis inhibitor 5 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 81.493 81.643 3 0.0027107 94422 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 25.827 18.205 27813000 0 0 0 0 0 0 0 4393900 2735900 0 7461000 0 3709100 9513100 0 30327 4278 27721 254935;254936;254937;254938;254939 202476;202477;202478 202476 3 LLEYSGLK Unmodified 921.51713 0.51713341 36 A8K2U0 A2ML1 Alpha-2-macroglobulin-like protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 54.679 54.023 2 0.015415 61960 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 68.915 24.304 52718000 0 0 0 52718000 0 0 0 0 0 0 0 0 0 0 0 30328 36 27722 254940 202479 202479 1 LLEYTPTAR Unmodified 1062.571 0.5709599 1605 P49841 GSK3B Glycogen synthase kinase-3 beta yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 46.818 47.268 2 0.036919 52112 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.489 11.939 47242000 0 0 0 0 0 0 0 0 0 19647000 0 0 0 0 27595000 30329 1605 27723 254941;254942 202480 202480 1 LLFDDGYECDVLGK Unmodified 1642.7549 0.75487386 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.83 3.67 3 1 2 1 2 1 1 1 85.636 82.587 2 4.9991E-14 103902 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 113.47 100.86 108330000 18406000 72264000 2973100 0 0 0 0 0 0 0 0 0 0 5058900 9624100 30330 2203 27724 254943;254944;254945;254946;254947;254948 202481;202482;202483;202484;202485;202486;202487 202484 6 LLFDETQGK Unmodified 1049.5393 0.53932542 28 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 53.718 52.309 2 0.0034222 59611 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 94.114 67.152 277230000 9523700 158990000 3826700 3917000 4367700 19547000 0 4813300 5613700 11838000 10241000 7427500 8383600 9856800 18886000 30331 28 27725 254949;254950;254951;254952;254953;254954;254955;254956;254957;254958;254959;254960;254961;254962;254963 202488;202489;202490;202491;202492;202493;202494;202495 202488 8 LLFDQFMK Oxidation (M) 1056.5314 0.53140327 2767 Q5T1C6 THEM4 Acyl-coenzyme A thioesterase THEM4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 76.94 76.663 2 0.018947 88645 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 56.547 29.945 15048000 0 0 0 3187300 4222300 7638400 0 0 0 0 0 0 0 0 0 30332 2767 27726 254964;254965;254966 202496 202496 4394 1 LLFEGAGSNPGDK Unmodified 1303.6408 0.64083038 1848 P61421 ATP6V0D1 V-type proton ATPase subunit d 1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching 10 0 7 1 1 1 2 1 1 53.899 53.926 2 0.012743 60777 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 56.404 38.093 41884000 0 0 0 0 14580000 10085000 0 0 7278600 6153100 0 0 3786300 0 0 30333 1848 27727 254967;254968;254969;254970;254971;254972;254973 202497;202498;202499 202497 3 LLFGHSTEGDILELVDGHFDTK Unmodified 2442.2067 0.2067049 4914 Q9UHY7 ENOPH1 Enolase-phosphatase E1 yes yes 0 0 0 By MS/MS By MS/MS 2.4 0.49 3 2 3 2 97.286 91.731 4 3.1229E-20 116125 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.383 71.294 93919000 75887000 18032000 0 0 0 0 0 0 0 0 0 0 0 0 0 30334 4914 27728 254974;254975;254976;254977;254978 202500;202501;202502 202502 3 LLFITEIPELILEDPSEAK Unmodified 2169.1821 0.18205328 3617 Q92540 SMG7 Protein SMG7 yes yes 0 0 0 By MS/MS 2 0 1 1 103.08 94.949 3 3.5546E-07 122093 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.942 57.35 6529400 6529400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30335 3617 27729 254979 202503 202503 1 LLFLGSDGK Unmodified 948.52803 0.52803245 3953 Q96Q15 SMG1 Serine/threonine-protein kinase SMG1 yes yes 0 0 0 By MS/MS 2 0 1 1 79.529 71.398 2 0.015812 93746 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.684 34.02 13500000 13500000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30336 3953 27730 254980 202504 202504 1 LLFNDVQTLK Unmodified 1189.6707 0.67067394 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.996 77.058 2 0.00052853 89200 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 124.23 51.746 217810000 0 0 0 11344000 12621000 15910000 15473000 14749000 12940000 19625000 20252000 27954000 14409000 18844000 33694000 30337 2501 27731 254981;254982;254983;254984;254985;254986;254987;254988;254989;254990;254991;254992 202505;202506;202507;202508;202509;202510;202511;202512;202513;202514;202515 202512 11 LLFQPDQNAPPIR Unmodified 1507.8147 0.81471242 2072 Q02241 KIF23 Kinesin-like protein KIF23 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.934 76.996 2 9.2595E-05 88914 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 85.731 63.645 41910000 0 0 0 2248500 1929100 2654800 3064700 2195500 3236600 3859200 3774100 5144500 4026700 3738700 6037400 30338 2072 27732 254993;254994;254995;254996;254997;254998;254999;255000;255001;255002;255003;255004 202516;202517;202518;202519;202520;202521;202522;202523;202524 202517 9 LLFSDGEK Unmodified 907.4651 0.46509784 4343 Q9H147 DNTTIP1 Deoxynucleotidyltransferase terminal-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 47.908 47.086 2 0.023017 51690 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 60.682 12.939 81318000 0 33512000 0 0 0 10460000 2145500 7764800 0 0 0 0 16922000 10515000 0 30339 4343 27733 255005;255006;255007;255008;255009;255010 202525;202526 202526 2 LLFSHDLVSGR Unmodified 1242.6721 0.67207093 4287 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 66.657 66.765 3 0.0035558 75369 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.674 36.628 59467000 0 0 0 2050800 0 8060000 2739000 4775300 5231300 4780200 5217600 0 5333700 4218800 17060000 30340 4287 27734 255011;255012;255013;255014;255015;255016;255017;255018;255019;255020 202527;202528;202529;202530 202529 4 LLFSNTAAQK Unmodified 1091.5975 0.597509 3994 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49.358 48.294 2 0.0014968 54182 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 90.709 55.46 646870000 115890000 64027000 17877000 25080000 23701000 40839000 31028000 31502000 26768000 49464000 47197000 41308000 42184000 34131000 55877000 30341 3994 27735 255021;255022;255023;255024;255025;255026;255027;255028;255029;255030;255031;255032;255033;255034;255035 202531;202532;202533;202534;202535;202536;202537;202538;202539;202540;202541;202542;202543;202544;202545;202546;202547 202536 16 LLFSSEK Unmodified 822.44872 0.4487195 4452 Q9H8M7 FAM188A Protein FAM188A yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 50.696 43.862 2 0.025219 60325 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 100.74 18.479 89445000 48331000 41114000 0 0 0 0 0 0 0 0 0 0 0 0 0 30342 4452 27736 255036;255037 202548;202549 202549 2 LLFTMLEK Oxidation (M) 1009.5518 0.55180436 2476 Q15021 NCAPD2 Condensin complex subunit 1 yes yes 0 1 0 By matching By matching By matching By matching By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 73.943 73.91 2 0.031415 84537 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.743 31.449 29955000 0 0 0 1963000 3071100 6914900 0 0 0 5023700 0 0 3189800 4384400 5408200 30343 2476 27737 255038;255039;255040;255041;255042;255043;255044 202550 202550 1 LLFTPQHK Unmodified 982.56 0.56000128 4100 Q9BQL6 FERMT1 Fermitin family homolog 1 yes yes 0 0 0 By MS/MS 2 0 1 1 51.046 43.085 2 0.026665 59657 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.116 29.758 14372000 14372000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30344 4100 27738 255045 202551 202551 1 LLFYATSR Unmodified 969.52837 0.5283668 3073 Q7Z2W4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 63.381 63.561 2 0.027721 72523 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 57.177 15.603 18941000 0 0 0 0 0 0 0 18941000 0 0 0 0 0 0 0 30345 3073 27739 255046 202552 202552 1 LLGADSATVFNIQEPEEETANQEYK Unmodified 2795.3137 0.31374874 3581 Q8WX93 PALLD Palladin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 83.438 83.501 3 1.7122E-75 96700 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 122.47 119.42 66657000 0 0 0 0 4813100 3655200 0 0 0 18532000 10431000 0 0 8358700 20867000 30346 3581 27740 255047;255048;255049;255050;255051;255052 202553;202554;202555;202556;202557;202558;202559;202560 202554 8 LLGAEEK Unmodified 758.41742 0.41741937 732 P00533 EGFR Epidermal growth factor receptor yes yes 0 0 0 By MS/MS By matching By matching By MS/MS 10 0 4 1 1 1 1 17.168 17.403 2 0.044016 17844 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 66.994 66.994 120350000 0 0 0 22990000 0 0 0 0 0 0 0 0 14749000 13215000 69391000 30347 732 27741 255053;255054;255055;255056 202561 202561 1 LLGASELPIVTPALR Unmodified 1548.9239 0.92392852 1682 P52292 KPNA2 Importin subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 1 2 2 2 2 2 2 2 2 2 2 2 89.683 89.772 2;3 8.7989E-27 103853 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 147.91 127.04 444960000 0 0 0 4451300 15529000 30705000 13933000 28396000 22404000 63757000 40356000 48223000 21526000 36131000 119550000 30348 1682 27742 255057;255058;255059;255060;255061;255062;255063;255064;255065;255066;255067;255068;255069;255070;255071;255072;255073;255074;255075;255076;255077;255078;255079 202562;202563;202564;202565;202566;202567;202568;202569;202570;202571;202572;202573;202574;202575;202576;202577;202578;202579;202580;202581;202582;202583 202566 22 LLGCEQLLTAVPGR Unmodified 1525.8286 0.82864792 2938 Q6P5Z2 PKN3 Serine/threonine-protein kinase N3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 80.982 81.108 2 0.0024069 93878 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 64.439 48.899 17059000 0 0 0 0 0 0 0 2945000 0 4079900 0 5159800 2948200 1926400 0 30349 2938 27743 255080;255081;255082;255083;255084 202584;202585;202586;202587;202588 202584 3 LLGCQSIEK Unmodified 1046.543 0.54303059 3601 Q8WYP5 AHCTF1 Protein ELYS yes yes 0 0 0 By MS/MS 2 0 1 1 42.624 37.477 2 0.034225 48657 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.207 6.396 23482000 0 23482000 0 0 0 0 0 0 0 0 0 0 0 0 0 30350 3601 27744 255085 202589 202589 1 LLGELLQDNAK Unmodified 1212.6714 0.67140222 1392 P37837 TALDO1 Transaldolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.11 3.8 6 1 12 1 4 2 1 1 1 1 1 1 1 1 1 1 1 1 73.483 71.93 2 1.1613E-21 82473 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 182.76 130.05 7589000000 377130000 5877700000 1011800000 13165000 3835100 4944700 6287800 8211500 3658100 9678500 46881000 47475000 5974000 38061000 134230000 30351 1392 27745 255086;255087;255088;255089;255090;255091;255092;255093;255094;255095;255096;255097;255098;255099;255100;255101;255102;255103;255104 202590;202591;202592;202593;202594;202595;202596;202597;202598;202599;202600;202601;202602;202603;202604;202605;202606;202607;202608;202609;202610;202611;202612;202613 202602 20 LLGELQEQIVQK Unmodified 1396.7926 0.79257999 4077 Q99996 AKAP9 A-kinase anchor protein 9 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 76.707 72.896 2 1.2435E-13 91215 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 132.88 97.43 57274000 0 52854000 4420000 0 0 0 0 0 0 0 0 0 0 0 0 30352 4077 27746 255105;255106 202614;202615 202614 2 LLGEQYYK Unmodified 1012.5229 0.52294707 3660 Q92785 DPF2 Zinc finger protein ubi-d4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 48.482 48.591 2 0.0068442 54699 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 94.262 66.155 140800000 0 0 0 19453000 0 0 0 19097000 0 0 63941000 0 19086000 19221000 0 30353 3660 27747 255107;255108;255109;255110;255111 202616;202617;202618;202619;202620 202617 3 LLGFEANGANGSK Unmodified 1276.6412 0.64116473 3108 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 2 1 1 1 1 1 1 53.559 53.882 2 4.8551E-10 61042 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 117.52 81.125 96445000 0 0 0 0 0 7814300 0 9303300 0 8183500 12012000 18173000 11199000 10359000 19401000 30354 3108 27748 255112;255113;255114;255115;255116;255117;255118;255119;255120;255121 202621;202622;202623;202624;202625;202626;202627;202628;202629;202630 202621 10 LLGGFQETCSK Unmodified 1238.5965 0.59652272 4195 Q9BVP2 GNL3 Guanine nucleotide-binding protein-like 3 yes yes 0 0 0 By MS/MS 2 0 1 1 54.278 48.472 2 0.00013419 62781 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.11 81.941 19192000 0 19192000 0 0 0 0 0 0 0 0 0 0 0 0 0 30355 4195 27749 255122 202631;202632 202632 2 LLGGLAVR Unmodified 797.51232 0.51232281 1156 P23396 RPS3 40S ribosomal protein S3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.249 58.367 2 0.02054 67506 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 62.715 14.473 688190000 0 0 0 39634000 50820000 40866000 37971000 39517000 23722000 51627000 71373000 59873000 69052000 98674000 105060000 30356 1156 27750 255123;255124;255125;255126;255127;255128;255129;255130;255131;255132;255133;255134 202633;202634;202635;202636;202637;202638;202639 202638 7 LLGGLDHIVDK Unmodified 1178.6659 0.66592292 3107 Q7Z5K2 WAPAL Wings apart-like protein homolog yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 70.196 70.308 3 0.043972 79826 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 27.378 16.59 33419000 0 0 0 0 933160 4705900 0 1908200 3458800 4337500 4060800 0 675750 3782700 9556700 30357 3107 27751 255135;255136;255137;255138;255139;255140;255141;255142;255143 202640 202640 1 LLGHEVEDVIIK Unmodified 1363.7711 0.77111627 3683 Q92900 UPF1 Regulator of nonsense transcripts 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72.041 71.027 3 0.0015285 80074 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.172 42.8 142030000 26598000 49978000 14523000 0 1219000 4062600 1505900 3542700 2981800 4161700 5052800 5064200 4199800 3786900 15358000 30358 3683 27752 255144;255145;255146;255147;255148;255149;255150;255151;255152;255153;255154;255155;255156;255157 202641;202642;202643;202644;202645;202646;202647 202644 7 LLGHLVK Unmodified 778.50651 0.50650915 1009 P14868 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 34.605 34.931 2 0.046463 36762 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.897 30.82 157160000 0 0 0 0 0 10257000 5823100 9354900 0 15577000 15648000 19545000 22584000 17584000 40788000 30359 1009 27753 255158;255159;255160;255161;255162;255163;255164;255165;255166 202648 202648 1 LLGHQNLK Unmodified 921.5396 0.53960019 478 O75330 HMMR Hyaluronan mediated motility receptor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 19.05 19.468 2 0.015683 18588 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.485 41.689 11890000 0 0 0 0 0 0 0 0 0 2863000 0 2509300 3197300 0 3320000 30360 478 27754 255167;255168;255169;255170 202649 202649 1 LLGLYHTMDK Oxidation (M) 1205.6114 0.6114445 2465 Q14CX7 NAA25 N-alpha-acetyltransferase 25, NatB auxiliary subunit yes yes 0 1 0 By matching By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 2 1 46.013 46.138 2;3 0.00042867 51843 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 122.13 69.419 198770000 0 0 0 0 0 1687400 26270000 38171000 125050000 7592100 0 0 0 0 0 30361 2465 27755 255171;255172;255173;255174;255175;255176 202650;202651;202652 202650 4059 3 LLGLYHTMDK Unmodified 1189.6165 0.61652988 2465 Q14CX7 NAA25 N-alpha-acetyltransferase 25, NatB auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 5 1 2 2 56.354 56.508 2;3 0.004701 64595 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 48.998 32.8 99037000 0 0 0 0 0 0 23061000 43289000 32687000 0 0 0 0 0 0 30362 2465 27755 255177;255178;255179;255180;255181 202653;202654;202655;202656;202657;202658;202659 202655 5 LLGMGDIEGLIDK Oxidation (M) 1388.7221 0.72211717 1826 P61011 SRP54 Signal recognition particle 54 kDa protein yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.74 2 1 17 2 1 1 2 2 2 2 1 1 1 2 2 1 82.365 82.277 2 2.8352E-13 101982 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.77 81.622 320680000 0 0 6660900 3059800 23866000 37778000 22362000 38974000 0 32859000 26389000 21858000 35272000 36549000 35050000 30363 1826 27756 255182;255183;255184;255185;255186;255187;255188;255189;255190;255191;255192;255193;255194;255195;255196;255197;255198;255199;255200;255201 202660;202661;202662;202663;202664;202665;202666;202667;202668;202669;202670;202671;202672;202673;202674;202675;202676;202677;202678 202665 2962 17 LLGMGDIEGLIDK Unmodified 1372.7272 0.72720254 1826 P61011 SRP54 Signal recognition particle 54 kDa protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.83 3.67 3 1 2 1 2 1 1 1 94.16 91.089 2 1.0633E-09 113658 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 135.99 94.538 222160000 44500000 173460000 952960 0 0 0 0 0 0 870920 0 0 0 0 2377900 30364 1826 27756 255202;255203;255204;255205;255206;255207 202679;202680;202681;202682;202683 202679 5 LLGNSLLK Unmodified 856.5382 0.53820321 189 O14578 CIT Citron Rho-interacting kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 55.743 55.827 2 0.01579 61780 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.312 4.3517 58881000 0 0 0 3516900 4960600 4552700 4442900 4588600 2823900 5940300 6800100 0 4747200 5807200 10701000 30365 189 27757 255208;255209;255210;255211;255212;255213;255214;255215;255216;255217;255218 202684 202684 1 LLGNTFVALSDLR Unmodified 1417.7929 0.79291434 1502 P46379 BAG6 Large proline-rich protein BAG6 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 89.098 89.226 2 1.0645E-06 103220 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.058 60.738 8682500 0 0 0 0 0 0 0 0 0 2792200 0 0 0 0 5890300 30366 1502 27758 255219;255220 202685;202686 202686 2 LLGPAGLTWER Unmodified 1211.6663 0.66625727 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 79.464 79.598 2 0.013397 91798 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 44.318 24.531 15105000 0 0 0 0 0 0 0 7424900 0 0 0 0 7679800 0 0 30367 645 27759 255221;255222 202687;202688 202687 2 LLGPDAAINLTDPDGALAK Unmodified 1863.9942 0.99419293 2317 Q13561 DCTN2 Dynactin subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.67 3.86 7 2 12 2 5 2 1 1 1 1 1 1 1 1 1 1 1 1 86.583 85.002 2;3 1.7644E-46 99014 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 139.3 112.51 2832800000 43082000 2425200000 40243000 4213100 15387000 23958000 17239000 21063000 16787000 40075000 26599000 37133000 17310000 24578000 79945000 30368 2317 27760 255223;255224;255225;255226;255227;255228;255229;255230;255231;255232;255233;255234;255235;255236;255237;255238;255239;255240;255241;255242;255243 202689;202690;202691;202692;202693;202694;202695;202696;202697;202698;202699;202700;202701;202702;202703;202704;202705;202706;202707;202708;202709;202710 202710 21 LLGPHVEGLK Unmodified 1061.6233 0.62332982 2285 Q13421 MSLN Mesothelin;Megakaryocyte-potentiating factor;Mesothelin, cleaved form yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51.767 50.566 2 0.0023379 56244 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 84.615 40.22 250510000 61406000 23573000 20962000 7300800 6144800 17309000 9870700 11351000 15225000 10170000 19828000 0 15227000 10958000 21184000 30369 2285 27761 255244;255245;255246;255247;255248;255249;255250;255251;255252;255253;255254;255255;255256;255257 202711;202712;202713;202714;202715;202716;202717;202718;202719;202720;202721;202722;202723;202724 202718 12 LLGPLLPASDLMLK Oxidation (M) 1495.8684 0.86838747 3171 Q86VQ1 GLCCI1 Glucocorticoid-induced transcript 1 protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 90.691 90.794 2 0.00068077 105124 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.65 54.001 21265000 0 0 0 0 1499600 0 1243900 0 2044300 0 3625800 0 0 2707600 10144000 30370 3171 27762 255258;255259;255260;255261;255262;255263;255264 202725;202726;202727 202725 4792 3 LLGPLLPASDLMLK Unmodified 1479.8735 0.87347285 3171 Q86VQ1 GLCCI1 Glucocorticoid-induced transcript 1 protein yes yes 0 0 0 By MS/MS 10 0 1 1 94.754 94.901 2 0.027893 110104 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.001 37.702 1437400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1437400 30371 3171 27762 255265 202728 202728 1 LLGPNASPDGLIPWTR Unmodified 1705.9152 0.91515474 1448 P42224 STAT1 Signal transducer and activator of transcription 1-alpha/beta yes yes 0 0 0 By MS/MS 10 0 1 1 88.309 88.459 2 0.0047749 102395 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.809 23.567 4774600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4774600 30372 1448 27763 255266 202729 202729 1 LLGPPPPGGGR Unmodified 1016.5767 0.57671398 1413 P40425 PBX2 Pre-B-cell leukemia transcription factor 2 yes yes 0 0 0 By MS/MS 10 0 1 1 42.74 42.789 2 0.029619 47813 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 38.962 2.3755 10347000 0 0 0 0 0 10347000 0 0 0 0 0 0 0 0 0 30373 1413 27764 255267 202730 202730 1 LLGPPPPPR Unmodified 942.56509 0.56508666 3955 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 48.027 48.079 2 0.014504 54140 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 58.194 46 18743000 0 0 0 0 2690000 0 3191500 0 0 3628700 0 0 4763600 4469600 0 30374 3955 27765 255268;255269;255270;255271;255272 202731;202732 202732 2 LLGPVLVK Unmodified 837.56878 0.56877505 264 O15212 PFDN6 Prefoldin subunit 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 2 1 1 74.439 69.33 2 0.017856 87815 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.673 43.01 2534100000 1414300000 813930000 305880000 0 0 0 0 0 0 0 0 0 0 0 0 30375 264 27766 255273;255274;255275;255276 202733;202734;202735 202733 3 LLGQFSEK Unmodified 920.49673 0.49673232 1708 P53004 BLVRA Biliverdin reductase A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45.295 44.225 2 0.0048222 49153 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 113.89 57.379 2072200000 658640000 860000000 180110000 0 18759000 25017000 20325000 23227000 14028000 29949000 42549000 59108000 32701000 40119000 67658000 30376 1708 27767 255277;255278;255279;255280;255281;255282;255283;255284;255285;255286;255287;255288;255289;255290 202736;202737;202738;202739;202740;202741;202742;202743;202744;202745;202746 202740 8 LLGQSQDNEK Unmodified 1130.5568 0.5567664 2935 Q6P4R8 NFRKB Nuclear factor related to kappa-B-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 6 4 2 2 1 1 1 1 16.65 15.214 2 0.017068 19119 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.692 44.561 21290000 0 10294000 1848600 0 0 0 5579000 0 3568500 0 0 0 0 0 0 30377 2935 27768 255291;255292;255293;255294 202747;202748 202748 2 LLGSGYGGLTGGSSR Unmodified 1380.6997 0.69974224 3094 Q7Z460 CLASP1 CLIP-associating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 2 1 2 1 1 1 55.779 56.086 2 0.00058399 63249 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 83.617 71.77 71911000 0 0 0 0 0 11923000 5606700 0 0 7238300 0 28027000 0 0 19116000 30378 3094 27769 255295;255296;255297;255298;255299;255300;255301;255302;255303 202749;202750;202751;202752;202753;202754;202755;202756 202753 8 LLGSLYALGIPK Unmodified 1243.754 0.75400964 3730 Q969Z0 TBRG4 Protein TBRG4 yes yes 0 0 0 By MS/MS 10 0 1 1 87.537 87.687 2 0.014885 101435 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.859 35.711 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30379 3730 27770 255304 202757 202757 1 LLGSMPENAQIDDDVFDK Oxidation (M) 2021.9252 0.92518666 4079 Q9BPX3 NCAPG Condensin complex subunit 3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 76.705 75.565 2 1.401E-226 92913 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 257.02 224.69 741470000 28631000 600900000 7849100 3703700 6546100 12394000 7114400 6531200 4704500 13774000 10844000 10077000 5666400 8789500 13939000 30380 4079 27771 255305;255306;255307;255308;255309;255310;255311;255312;255313;255314;255315;255316;255317;255318;255319;255320 202758;202759;202760;202761;202762;202763;202764;202765;202766;202767;202768;202769;202770;202771;202772;202773 202761 5586 16 LLGSMPENAQIDDDVFDK Unmodified 2005.9303 0.93027204 4079 Q9BPX3 NCAPG Condensin complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.83 3.67 3 1 2 1 2 1 1 1 83.55 80.515 2 3.1207E-15 96498 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 148.62 140.51 618830000 29475000 567260000 8273100 0 0 0 0 4628300 0 0 0 0 0 0 9196800 30381 4079 27771 255321;255322;255323;255324;255325;255326 202774;202775;202776;202777;202778;202779;202780 202776 7 LLGSTLTSEEK Unmodified 1176.6238 0.62378333 4472 Q9H9F9 ACTR5 Actin-related protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 45.866 46.178 2 0.003423 50800 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 78.939 45.388 29570000 0 0 0 0 0 0 2908300 9037600 0 0 0 6357600 8263800 3002300 0 30382 4472 27772 255327;255328;255329;255330;255331 202781;202782;202783;202784;202785;202786 202783 6 LLGSVDYDGINDAITR Unmodified 1720.8632 0.86317875 178 O00750 PIK3C2B Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 79.011 79.108 2 8.1407E-20 91464 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 110.31 82.293 40129000 0 0 0 0 1939700 3644900 2222900 3122100 0 6080200 6298400 5337100 0 0 11483000 30383 178 27773 255332;255333;255334;255335;255336;255337;255338;255339 202787;202788;202789;202790;202791;202792;202793 202788 7 LLGTEASTCCPFP Unmodified 1451.6425 0.64248664 3300 Q8N0W3 FUK L-fucose kinase yes yes 0 0 0 By MS/MS 2 0 1 1 81.817 77.112 2 0.027336 95978 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 47.599 31.396 23547000 0 23547000 0 0 0 0 0 0 0 0 0 0 0 0 0 30384 3300 27774 255340 202794 202794 1 LLGTPTEEQWPSMTK Unmodified 1716.8393 0.83927219 2036 Q00535 CDK5 Cyclin-dependent-like kinase 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 76.502 76.632 2 0.0070921 88372 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 46.844 40.408 23001000 0 0 0 0 0 6657500 0 4533500 0 0 6063400 0 0 5746400 0 30385 2036 27775 255341;255342;255343;255344 202795;202796 202796 2 LLGTSADVDIHHLASLDPEVYK Unmodified 2392.2274 0.22744034 2525 Q15386 UBE3C Ubiquitin-protein ligase E3C yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 88.45 82.778 4 0.0032163 106046 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 27.32 23.726 21816000 15374000 6442200 0 0 0 0 0 0 0 0 0 0 0 0 0 30386 2525 27776 255345;255346 202797;202798 202798 2 LLGVIIEEGK Unmodified 1069.6383 0.63831118 2313 Q13546 RIPK1 Receptor-interacting serine/threonine-protein kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 74.819 74.028 2 0.0032012 85397 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 77.355 46.066 120090000 19915000 0 28072000 2833900 3980000 7200500 5485700 0 6248700 9217000 6484300 9307600 5145500 5590500 10614000 30387 2313 27777 255347;255348;255349;255350;255351;255352;255353;255354;255355;255356;255357;255358;255359 202799;202800;202801;202802;202803;202804;202805;202806 202803 8 LLGVPIIVQASQAEK Unmodified 1564.9188 0.91884314 3139 Q86U06 RBM23 Probable RNA-binding protein 23 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 86.235 86.303 2 1.3534E-09 99996 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 91.855 70.984 91928000 0 0 0 2406500 4559900 6047700 6438600 9386100 8212300 10200000 10017000 9428000 6145200 6489100 12598000 30388 3139 27778 255360;255361;255362;255363;255364;255365;255366;255367;255368;255369;255370;255371 202807;202808;202809;202810;202811;202812;202813;202814;202815;202816;202817;202818;202819;202820;202821;202822;202823 202807 17 LLGWIQNK Unmodified 970.56 0.56000128 1124;487 P21333;O75369 FLNA;FLNB Filamin-A;Filamin-B no no 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.419 68.497 2 0.0058497 78913 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 105.27 86.89 161890000 0 0 0 675950 5652400 17390000 8835300 8319100 7879300 13062000 14827000 17163000 10483000 13975000 43625000 30389 1124;487 27779 255372;255373;255374;255375;255376;255377;255378;255379;255380;255381;255382;255383 202824;202825;202826;202827;202828;202829;202830;202831;202832 202830 9 LLHAAQSSR Unmodified 981.53558 0.53557744 4721 Q9NX74 DUS2 tRNA-dihydrouridine(20) synthase [NAD(P)+]-like yes yes 0 0 0 By MS/MS 10 0 1 1 27.232 27.251 2 0.033064 29130 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 47.082 11.463 5875100 0 0 0 0 0 0 5875100 0 0 0 0 0 0 0 0 30390 4721 27780 255384 202833 202833 1 LLHDLQIGEK Unmodified 1164.6503 0.65027285 1596 P49756 RBM25 RNA-binding protein 25 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 25 3 2 2 2 2 2 2 2 2 2 2 2 50.628 50.75 2;3 0.00055696 58409 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 118.28 98.517 2000200000 0 0 0 104210000 82529000 137150000 137660000 126880000 177840000 187550000 163110000 212160000 181940000 173850000 315340000 30391 1596 27781 255385;255386;255387;255388;255389;255390;255391;255392;255393;255394;255395;255396;255397;255398;255399;255400;255401;255402;255403;255404;255405;255406;255407;255408;255409 202834;202835;202836;202837;202838;202839;202840;202841;202842;202843;202844;202845;202846;202847;202848;202849;202850;202851;202852;202853;202854;202855;202856;202857;202858;202859;202860;202861;202862;202863;202864;202865;202866;202867;202868;202869;202870;202871;202872;202873;202874;202875;202876;202877;202878;202879;202880;202881;202882;202883;202884;202885 202877 46 LLHDLQIGEKK Unmodified 1292.7452 0.74523587 1596 P49756 RBM25 RNA-binding protein 25 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 41.538 41.905 3 0.016002 46226 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 32.999 25.544 38603000 0 0 0 0 0 0 4350700 0 3700000 3962200 8274000 6499700 4119100 3671100 4026100 30392 1596 27782 255410;255411;255412;255413;255414;255415;255416;255417 202886 202886 1 LLHDQIEK Unmodified 994.54475 0.54474515 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.695 20.898 2 0.0043065 21364 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 111.74 63.178 351340000 0 0 0 10673000 8772000 18434000 16315000 12778000 14906000 26375000 43638000 56616000 37150000 28819000 76864000 30393 965 27783 255418;255419;255420;255421;255422;255423;255424;255425;255426;255427;255428;255429 202887;202888;202889;202890;202891;202892;202893;202894;202895;202896;202897;202898 202895 10 LLHDQVGVIQFGPYK Unmodified 1712.925 0.92499115 1721 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 77.927 78.075 3 4.2709E-07 90205 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 65.472 47.983 105240000 0 0 0 0 0 9721000 3742200 9553100 6825800 8965100 6885700 8289900 4835900 7958100 38460000 30394 1721 27784 255430;255431;255432;255433;255434;255435;255436;255437;255438;255439 202899;202900;202901;202902;202903;202904;202905;202906;202907 202907 8 LLHEQEVESR Unmodified 1238.6255 0.62551466 2784 Q5T7V8 GORAB RAB6-interacting golgin yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 20.478 20.807 3 0.014336 20632 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.845 2.6503 89392000 0 0 0 0 6529000 0 0 0 0 14735000 16130000 16588000 0 14259000 21151000 30395 2784 27785 255440;255441;255442;255443;255444;255445 202908 202908 1 LLHEVQELTTEVEK Unmodified 1666.8778 0.87776618 2317 Q13561 DCTN2 Dynactin subunit 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 78.201 74.488 2;3 1.0299E-21 93092 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 152.85 133.09 39324000 0 35280000 4043600 0 0 0 0 0 0 0 0 0 0 0 0 30396 2317 27786 255446;255447;255448 202909;202910;202911 202910 3 LLHGDIK Unmodified 794.46504 0.46503826 3905 Q96KB5 PBK Lymphokine-activated killer T-cell-originated protein kinase yes yes 0 0 0 By MS/MS 2 0 1 1 24.088 19.96 2 0.039422 26340 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.297 20.509 91010000 0 91010000 0 0 0 0 0 0 0 0 0 0 0 0 0 30397 3905 27787 255449 202912 202912 1 LLHHVTEEK Unmodified 1104.5928 0.59275797 2794 Q5TBB1 RNASEH2B Ribonuclease H2 subunit B yes yes 0 0 0 By MS/MS 2 0 1 1 16.049 11.937 2 0.035136 17398 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.673 18.712 12101000 12101000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30398 2794 27788 255450 202913 202913 1 LLHIYYQNSIDDK Unmodified 1620.8148 0.814772 2647 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 0 0 0 By MS/MS 2 0 1 1 73.318 65.121 3 0.00082196 86191 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.522 66.168 46770000 46770000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30399 2647 27789 255451 202914;202915 202915 2 LLHPSPDLVSQEATLSEAR Unmodified 2062.0695 0.069483134 3269 Q8IY22 CMIP C-Maf-inducing protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 73.766 73.826 3 5.6772E-06 84691 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 69.148 60.101 88229000 0 0 0 0 11005000 18116000 9430400 0 12076000 0 0 0 12971000 0 24631000 30400 3269 27790 255452;255453;255454;255455;255456;255457 202916;202917;202918;202919;202920;202921;202922;202923;202924;202925 202920 10 LLHQFSFSPER Unmodified 1359.6935 0.69353465 4947 Q9UJX6 ANAPC2 Anaphase-promoting complex subunit 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 63.698 63.922 3 0.0096162 72146 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.207 26.079 24282000 0 0 0 0 0 6180200 0 0 0 0 0 0 2729900 3845400 11527000 30401 4947 27791 255458;255459;255460;255461 202926 202926 1 LLHQLADLVER Unmodified 1305.7405 0.74048484 1527 P47895 ALDH1A3 Aldehyde dehydrogenase family 1 member A3 yes yes 0 0 0 By MS/MS 10 0 1 1 33.496 34.218 3 0.02192 36300 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 28.177 17.869 159770000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 159770000 30402 1527 27792 255462 202927 202927 1 LLHSENYVTK Unmodified 1202.6295 0.62953741 5140 Q9Y376 CAB39 Calcium-binding protein 39 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 6 2 2 2 33.699 28.957 2;3 0.0018294 36058 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 82.417 60.424 930310000 657460000 136030000 136820000 0 0 0 0 0 0 0 0 0 0 0 0 30403 5140 27793 255463;255464;255465;255466;255467;255468 202928;202929;202930;202931;202932 202931 3 LLHTLEGHAMPIR Oxidation (M) 1502.8028 0.80276752 4304 Q9GZS3 WDR61 WD repeat-containing protein 61;WD repeat-containing protein 61, N-terminally processed yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 42.177 42.588 3 0.00051956 45981 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.48 48.713 63508000 0 0 0 0 0 17672000 0 0 0 2630400 0 14216000 8805200 0 20185000 30404 4304 27794 255469;255470;255471;255472;255473 202933;202934 202933 5764 2 LLHTLEGHAMPIR Unmodified 1486.8079 0.8078529 4304 Q9GZS3 WDR61 WD repeat-containing protein 61;WD repeat-containing protein 61, N-terminally processed yes yes 0 0 0 By MS/MS 10 0 1 1 54.955 55.595 3 0.0024984 62133 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.463 37.695 9767600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9767600 30405 4304 27794 255474 202935 202935 1 LLHVAVSDVNDDVR Unmodified 1550.8053 0.80526994 4011 Q99460 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 59.586 59.585 3 0.0025606 67650 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 62.162 54.437 60270000 0 0 0 3779900 4686600 8474300 3699200 0 0 11554000 12692000 15384000 0 0 0 30406 4011 27795 255475;255476;255477;255478;255479;255480;255481 202936 202936 0 LLHVAVSDVNDDVRR Unmodified 1706.9064 0.90638097 4011 Q99460 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 2 1 2 2 1 2 53.211 53.607 3;4 7.2815E-05 60289 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 68.972 62.243 230980000 0 0 0 0 0 42749000 0 0 8247900 0 44224000 80163000 0 10136000 45463000 30407 4011 27796 255482;255483;255484;255485;255486;255487;255488;255489;255490;255491 202937;202938;202939;202940;202941;202942;202943;202944;202945 202945 9 LLIAFQNR Unmodified 973.5709 0.57090032 134 O00257 CBX4 E3 SUMO-protein ligase CBX4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 69.076 69.186 2 0.014296 79141 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 70.716 54.571 28711000 0 0 0 2615100 0 0 0 0 0 5325100 0 6881500 0 4404500 9484500 30408 134 27797 255492;255493;255494;255495;255496 202946;202947 202947 2 LLIDEAILK Unmodified 1026.6325 0.63249752 1580 P49591 SARS Serine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.874 81.935 2 0.0030483 94797 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 91.318 48.318 236340000 0 0 0 5071400 6827500 13063000 8549000 8753400 7552300 19881000 28113000 35692000 9346600 24949000 68546000 30409 1580 27798 255497;255498;255499;255500;255501;255502;255503;255504;255505;255506;255507;255508 202948;202949;202950;202951;202952;202953;202954;202955;202956;202957;202958;202959 202953 12 LLIDPNCSGHSPRTARHAPAVR Unmodified 2424.2557 0.25567797 3602 Q8WYQ5 DGCR8 Microprocessor complex subunit DGCR8 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching 10 0 7 1 1 1 1 1 1 1 45.758 45.969 4 0.043774 51943 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 21.006 13.384 54485000 0 0 0 0 3842400 0 6739200 0 0 6415900 8479600 0 6517900 5852600 16637000 30410 3602 27799 255509;255510;255511;255512;255513;255514;255515 202960 202960 1 LLIEMEQR Oxidation (M) 1046.543 0.54303059 967 P12277 CKB Creatine kinase B-type yes yes 0 1 0 By MS/MS 10 0 1 1 38.716 39.455 2 0.034618 42731 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.016 14.061 16002000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16002000 30411 967 27800 255516 202961 202961 1277 1 LLIEMEQR Unmodified 1030.5481 0.54811597 967 P12277 CKB Creatine kinase B-type yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 59.362 59.434 2 0.039628 67521 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 50.607 24.005 16312000 0 0 0 1210600 0 0 0 0 0 0 5851500 9249700 0 0 0 30412 967 27800 255517;255518;255519 202962 202962 1 LLIEMEQRLEQGQAIDDLMPAQK Unmodified 2668.3564 0.35642238 967 P12277 CKB Creatine kinase B-type yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 2 2 2 2 93.694 88.77 3 6.7878E-122 111253 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 178.41 136.1 76004000 60400000 15604000 0 0 0 0 0 0 0 0 0 0 0 0 0 30413 967 27801 255520;255521;255522;255523 202963;202964;202965;202966;202967 202966 5 LLIEMEQRLEQGQAIDDLMPAQK 2 Oxidation (M) 2700.3463 0.34625162 967 P12277 CKB Creatine kinase B-type yes yes 0 2 1 By MS/MS By MS/MS 2 0 2 1 1 80.539 75.187 3 2.9426E-66 96362 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 134.86 127.66 67260000 48730000 0 18529000 0 0 0 0 0 0 0 0 0 0 0 0 30414 967 27801 255524;255525 202968;202969;202970 202969 1276;1277 3 LLIEMEQRLEQGQAIDDLMPAQK Oxidation (M) 2684.3513 0.351337 967 P12277 CKB Creatine kinase B-type yes yes 0 1 1 By MS/MS 2 0 2 2 88.507 80.377 3 9.2281E-38 105916 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 115.66 78.976 83309000 83309000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30415 967 27801 255526;255527 202971;202972;202973;202974 202974 1276;1277 4 LLIESLEK Unmodified 943.559 0.55899823 3485 Q8TC07 TBC1D15 TBC1 domain family member 15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 68.692 67.236 2 0.006389 75671 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 101.28 25.25 842610000 52264000 331310000 109700000 19125000 18424000 38037000 26000000 21251000 20016000 33121000 33364000 30396000 28958000 29808000 50842000 30416 3485 27802 255528;255529;255530;255531;255532;255533;255534;255535;255536;255537;255538;255539;255540;255541;255542;255543;255544 202975;202976;202977;202978;202979;202980;202981;202982;202983;202984;202985;202986;202987;202988 202986 13 LLIHQSLAGGIIGVK Unmodified 1517.9293 0.92934824 1868 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes yes 0 0 0 By MS/MS 10 0 1 1 77.704 77.968 3 0.029863 89630 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.325 37.804 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30417 1868 27803 255545 202989 202989 1 LLILADMADVYK Oxidation (M) 1379.737 0.73703895 1340 P35221 CTNNA1 Catenin alpha-1 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 79.396 79.404 2 0.01105 91763 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 42.348 23.254 69473000 0 0 0 6095300 4216300 7075400 0 0 8030800 15345000 0 12747000 2648000 0 13316000 30418 1340 27804 255546;255547;255548;255549;255550;255551;255552;255553 202990 202990 2028 1 LLILADMADVYK Unmodified 1363.7421 0.74212433 1340 P35221 CTNNA1 Catenin alpha-1 yes yes 0 0 0 By MS/MS 10 0 1 1 90.637 90.775 2 0.010935 105090 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.567 36.787 1326100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1326100 30419 1340 27804 255554 202991 202991 1 LLILALER Unmodified 939.6117 0.6117025 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 83.46 83.499 2 0.02313 96233 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 60.59 32.078 35641000 0 0 0 4256400 0 0 6911700 8803000 15670000 0 0 0 0 0 0 30420 2930 27805 255555;255556;255557;255558 202992;202993;202994 202992 2 LLILEYAR Unmodified 989.59097 0.59096706 375 O43847 NRD1 Nardilysin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.961 79.02 2 0.011381 90424 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 77.058 45.768 84073000 0 0 0 2970400 2772200 5037400 4017600 4434700 4470200 6732500 7998000 10229000 6075300 7257300 22078000 30421 375 27806 255559;255560;255561;255562;255563;255564;255565;255566;255567;255568;255569;255570 202995;202996;202997;202998;202999;203000;203001;203002;203003;203004;203005 203002 11 LLILMEAR Oxidation (M) 973.56304 0.56303775 1441 P41252 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 65.143 65.455 2 0.029898 74547 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.561 20.049 11012000 0 0 0 0 0 0 0 3008400 0 0 0 8003600 0 0 0 30422 1441 27807 255571;255572 203006 203006 1 LLINSQPK Unmodified 911.54402 0.54401687 3348 Q8N5I9 C12orf45 Uncharacterized protein C12orf45 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.142 36.322 2 0.012884 40097 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 73.616 32.314 257780000 0 0 0 13693000 17668000 15460000 20443000 19818000 14311000 24670000 28332000 28817000 22873000 18970000 32724000 30423 3348 27808 255573;255574;255575;255576;255577;255578;255579;255580;255581;255582;255583;255584 203007;203008;203009;203010;203011;203012;203013;203014;203015 203010 9 LLIPERDPLEEIAESSPQTAANSAAELLK Unmodified 3104.6241 0.62412427 2854 Q68CZ2 TNS3 Tensin-3 yes yes 0 0 1 By MS/MS 2 0 1 1 97.993 89.862 3 5.4448E-40 115963 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.93 91.417 19729000 19729000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30424 2854 27809 255585 203016 203016 1 LLIQLADGFCEK Unmodified 1405.7275 0.72753689 566 O75962 TRIO Triple functional domain protein yes yes 0 0 0 By MS/MS 2 0 1 1 90.973 82.843 2 0.00026017 107567 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.573 67.802 4025900 4025900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30425 566 27810 255586 203017 203017 1 LLIQQVR Unmodified 868.54944 0.54943659 2342 Q13751 LAMB3 Laminin subunit beta-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 48.089 48.288 2 0.044016 54246 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 66.994 10.483 38499000 0 0 0 0 4009700 0 4476700 3898300 0 6095100 5184800 0 4691400 4806200 5336800 30426 2342 27811 255587;255588;255589;255590;255591;255592;255593;255594 203018 203018 1 LLISSLTR Unmodified 901.55967 0.55966693 5064 Q9UPZ3 HPS5 Hermansky-Pudlak syndrome 5 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 66.366 66.52 2 0.0075386 75221 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.296 39.937 69063000 0 0 0 0 3770000 5087300 5257600 6539300 2743800 6538100 7095700 10465000 7934500 5974000 7657700 30427 5064 27812 255595;255596;255597;255598;255599;255600;255601;255602;255603;255604;255605 203019;203020 203019 2 LLITGTEQFNQK Unmodified 1390.7456 0.7456298 3615 Q92538 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 65.081 63.74 2 2.5786E-14 77630 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 141.48 111.67 351020000 13867000 209740000 7205700 4497600 6660900 16420000 7381700 7788600 7006800 15518000 9492100 9768300 9736400 10947000 14991000 30428 3615 27813 255606;255607;255608;255609;255610;255611;255612;255613;255614;255615;255616;255617;255618;255619;255620;255621 203021;203022;203023;203024;203025;203026;203027;203028;203029;203030;203031;203032;203033;203034;203035;203036;203037;203038;203039 203027 19 LLITGTEQFNQKPK Unmodified 1615.8934 0.89335667 3615 Q92538 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 0 0 1 By MS/MS 2 0 1 1 67.015 58.721 3 0.0070016 78785 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.189 34.356 5974400 5974400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30429 3615 27814 255622 203040 203040 1 LLITGTPLQNSLK Unmodified 1396.829 0.8289655 199 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.794 79.852 2 0.0047482 92308 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 50.108 12.38 95944000 0 0 0 3092600 4285300 7135400 5121600 6968500 4880700 10448000 9998400 11998000 5187800 9427100 17402000 30430 199 27815 255623;255624;255625;255626;255627;255628;255629;255630;255631;255632;255633;255634 203041;203042;203043;203044;203045;203046;203047;203048 203041 8 LLIVSNPVDILTYVAWK Unmodified 1943.1132 0.11318585 719 P00338 LDHA L-lactate dehydrogenase A chain yes yes 0 0 0 By MS/MS 2 0 1 1 103.99 99.247 2 0.000933 122573 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 63.473 0 4985400 0 4985400 0 0 0 0 0 0 0 0 0 0 0 0 0 30431 719 27816 255635 203049 203049 1 LLIVSTTPYSEK Unmodified 1349.7442 0.74423282 5077 Q9Y230 RUVBL2 RuvB-like 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.658 69.735 2 5.2188E-06 79940 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 131.44 109.35 1184900000 0 0 0 61448000 65620000 94421000 86675000 81219000 61851000 117990000 118070000 131900000 93481000 95844000 176330000 30432 5077 27817 255636;255637;255638;255639;255640;255641;255642;255643;255644;255645;255646;255647 203050;203051;203052;203053;203054;203055;203056;203057;203058;203059;203060;203061;203062 203055 13 LLIYETEAK Unmodified 1078.591 0.59102664 1596 P49756 RBM25 RNA-binding protein 25 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 54.124 54.261 2 0.0030483 61049 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 91.318 60.814 2072800000 0 0 0 151830000 117020000 106360000 160520000 148870000 155420000 197300000 212690000 226110000 206530000 140880000 249240000 30433 1596 27818 255648;255649;255650;255651;255652;255653;255654;255655;255656;255657;255658;255659 203063;203064;203065;203066;203067;203068;203069;203070;203071;203072;203073;203074;203075;203076;203077;203078;203079 203065 16 LLKPECVLDK Unmodified 1213.674 0.67404476 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 51.654 51.478 3 0.043461 58003 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 35.652 18.627 29404000 0 0 0 4148300 4676300 9558200 4452400 6568800 0 0 0 0 0 0 0 30434 3641 27819 255660;255661;255662;255663;255664 203080 203080 1 LLLAADPGGSPAQR Unmodified 1364.7412 0.74121312 2755 Q5SQI0 ATAT1 Alpha-tubulin N-acetyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 57.111 57.301 2 0.0035776 65885 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 47.844 31.006 83358000 0 0 0 0 6453500 8227100 6893400 9091600 6060100 10601000 9842100 13969000 0 4149700 8070400 30435 2755 27820 255665;255666;255667;255668;255669;255670;255671;255672;255673;255674 203081;203082;203083;203084 203084 2 LLLAEFAQHR Unmodified 1196.6666 0.66659162 3212 Q86YV9 HPS6 Hermansky-Pudlak syndrome 6 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 71.399 71.71 3 0.008454 81839 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.77 35.706 18201000 0 0 0 0 0 0 3134900 0 0 0 0 6834500 0 0 8231300 30436 3212 27821 255675;255676;255677 203085;203086;203087 203086 3 LLLAIVGQ Unmodified 825.53239 0.53238955 1100 P20073 ANXA7 Annexin A7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 87.547 87.676 2 0.010023 101254 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.999 69.93 13013000 0 0 0 0 0 1764800 1657800 1330300 0 2385300 0 1883300 982340 0 3009200 30437 1100 27822 255678;255679;255680;255681;255682;255683;255684 203088;203089 203089 2 LLLASEGR Unmodified 857.49707 0.49706667 2867 Q6BDS2 UHRF1BP1 UHRF1-binding protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching 10 0 5 1 1 1 1 1 40.178 40.094 2 0.020846 44803 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 62.464 5.0008 42695000 0 0 0 11147000 13443000 0 13385000 1325300 0 0 0 0 3393900 0 0 30438 2867 27823 255685;255686;255687;255688;255689 203090;203091 203091 2 LLLATMESMNGGK Oxidation (M) 1379.6789 0.67887214 720 P00352 ALDH1A1 Retinal dehydrogenase 1 yes yes 0 1 0 By MS/MS 10 0 1 1 62.771 62.077 2 0.0085583 71736 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 41.704 28.667 3069700 0 0 0 3069700 0 0 0 0 0 0 0 0 0 0 0 30439 720 27824 255690 203092 203092 866 1 LLLAVLK Unmodified 768.54731 0.54731133 1739 P54278 PMS2 Mismatch repair endonuclease PMS2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.557 78.615 2 0.044016 90796 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.994 0 189870000 0 0 0 9411100 9977500 15464000 15224000 14244000 14468000 20597000 17508000 19619000 13736000 12929000 26693000 30440 1739 27825 255691;255692;255693;255694;255695;255696;255697;255698;255699;255700;255701;255702 203093;203094;203095;203096;203097;203098;203099;203100;203101;203102;203103 203093 11 LLLDADVCNVDHQNK Unmodified 1752.8465 0.84648283 2429 Q14678 KANK1 KN motif and ankyrin repeat domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 61.608 61.871 3 0.0020335 70661 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 31.319 20.532 57654000 0 0 0 0 0 6140400 0 0 7036300 5864700 7679200 12050000 5491800 5070900 8320200 30441 2429 27826 255703;255704;255705;255706;255707;255708;255709;255710 203104;203105;203106;203107 203104 4 LLLDDSFETK Unmodified 1179.6023 0.60231961 156 O00443 PIK3C2A Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 72.086 72.319 2 0.0065119 82519 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.711 30.915 30013000 0 0 0 0 0 0 0 0 0 0 10178000 0 5921300 6028700 7885300 30442 156 27827 255711;255712;255713;255714 203108;203109 203108 2 LLLDEITR Unmodified 971.56515 0.56514624 2838 Q63HN8 RNF213 E3 ubiquitin-protein ligase RNF213 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 74.18 74.226 2 0.017693 84557 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 65.252 15.894 44914000 0 0 0 3797400 3164900 4730000 2687400 3341600 2551000 4628100 4184400 0 3842400 3676100 8310300 30443 2838 27828 255715;255716;255717;255718;255719;255720;255721;255722;255723;255724;255725 203110 203110 1 LLLDIPLQTPHK Unmodified 1386.8235 0.82348619 1601;32 P49792;P0DJD0;P0DJD1;A6NKT7 RANBP2;RGPD1;RGPD2;RGPD3 E3 SUMO-protein ligase RanBP2;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RanBP2-like and GRIP domain-containing protein 3 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.29 82.351 3 6.3806E-05 95367 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 88.187 80.458 144660000 0 0 0 2183600 4010400 12063000 6076200 9145200 8231700 13881000 11724000 15183000 9465700 15232000 37468000 30444 1601;32 27829 255726;255727;255728;255729;255730;255731;255732;255733;255734;255735;255736;255737 203111;203112;203113;203114;203115;203116;203117;203118;203119;203120;203121 203120 11 LLLDMYR Unmodified 922.49462 0.49462383 2816 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.159 74.22 2 0.023354 84733 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.673 0 121650000 0 0 0 5163300 5621100 7003200 6125100 11330000 8689600 9047700 11260000 11898000 8497500 10633000 26381000 30445 2816 27830 255738;255739;255740;255741;255742;255743;255744;255745;255746;255747;255748;255749 203122;203123;203124 203122 3 LLLDNTQIMNALQK Oxidation (M) 1629.876 0.87599205 380 O43929;CON__Q2YDI2 ORC4 Origin recognition complex subunit 4 yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 2 2 2 2 1 1 2 79.724 79.779 2 8.4617E-15 91815 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 117.52 82.106 167450000 0 0 0 6205200 11391000 16349000 12657000 12191000 12237000 24358000 18215000 24919000 5279300 6139200 17513000 30446 380 27831 255750;255751;255752;255753;255754;255755;255756;255757;255758;255759;255760;255761;255762;255763;255764;255765;255766;255767;255768;255769;255770;255771 203125;203126;203127;203128;203129;203130;203131;203132;203133;203134;203135;203136;203137;203138;203139;203140 203129 489 12 LLLDNTQIMNALQK Unmodified 1613.8811 0.88107742 380 O43929;CON__Q2YDI2 ORC4 Origin recognition complex subunit 4 yes no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 87.719 87.029 2 4.8254E-19 100925 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 132.91 108.57 27714000 0 10799000 0 0 0 0 0 2212000 0 3131000 2514900 0 0 2007800 7049100 30447 380 27831 255772;255773;255774;255775;255776;255777 203141;203142;203143;203144;203145 203141 5 LLLDPEFTLLQR Unmodified 1456.829 0.8289655 4266 Q9BZH6 WDR11 WD repeat-containing protein 11 yes yes 0 0 0 By MS/MS 10 0 1 1 93.567 93.708 2 0.028861 108623 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.344 7.8711 1402800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1402800 30448 4266 27832 255778 203146 203146 1 LLLDPSSPPTK Unmodified 1166.6547 0.65468953 2883 Q6IAA8 LAMTOR1 Ragulator complex protein LAMTOR1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 59.662 58.997 2 0.0029118 67309 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 66.621 23.375 95796000 0 23854000 0 0 5225500 5437500 6343300 7072600 4285000 7159000 7827400 7899200 8015500 5271500 7406200 30449 2883 27833 255779;255780;255781;255782;255783;255784;255785;255786;255787;255788;255789;255790;255791 203147;203148;203149;203150;203151;203152;203153;203154;203155 203153 9 LLLDQEQK Unmodified 985.54441 0.5444108 562 O75937 DNAJC8 DnaJ homolog subfamily C member 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.87 3 5 1 1 1 1 1 1 1 1 38.745 37.139 2 0.0046473 48015 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 143 59.203 991590000 61288000 761920000 13750000 0 0 0 0 0 0 0 29042000 38882000 9688100 19750000 57268000 30450 562 27834 255792;255793;255794;255795;255796;255797;255798;255799 203156;203157;203158;203159;203160 203158 3 LLLEAGADPTVQDSR Unmodified 1583.8155 0.81550028 4457 Q9H8Y5 ANKZF1 Ankyrin repeat and zinc finger domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 64.5 64.563 2 5.9266E-23 73839 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 121.08 71.708 58580000 0 0 0 0 5589700 7809700 0 5961700 0 13140000 11318000 0 7501700 7259900 0 30451 4457 27835 255800;255801;255802;255803;255804;255805;255806;255807 203161;203162;203163;203164;203165;203166;203167;203168 203162 7 LLLEDLVK Unmodified 941.57973 0.57973367 2231 Q13085 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 83.394 83.498 2 0.036695 96167 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.736 21.017 53314000 0 0 0 0 1415000 3798200 3265300 3569100 3412500 7444000 5607200 5909400 4407800 5516800 8969200 30452 2231 27836 255808;255809;255810;255811;255812;255813;255814;255815;255816;255817;255818 203169;203170 203170 2 LLLEFTDTSYEEK Unmodified 1586.7716 0.77156978 1120 P21266 GSTM3 Glutathione S-transferase Mu 3 yes yes 0 0 0 By MS/MS 10 0 1 1 81.013 81.228 2 0.0013568 93605 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 102.52 84.659 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30453 1120 27837 255819 203171 203171 1 LLLEGEK Unmodified 800.46437 0.46436956 3591 Q8WXH0 SYNE2 Nesprin-2 yes yes 0 0 0 By MS/MS 2 0 1 1 35.683 30.835 2 0.031783 39919 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.029 29.861 18372000 0 18372000 0 0 0 0 0 0 0 0 0 0 0 0 0 30454 3591 27838 255820 203172 203172 1 LLLEGISSTHVNHLR Unmodified 1687.937 0.93695282 4592 Q9NR46 SH3GLB2 Endophilin-B2 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 64.897 65.254 4 0.0071374 73698 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.292 25.634 9968800 0 0 0 0 0 0 0 0 1645200 0 0 0 0 0 8323500 30455 4592 27839 255821;255822 203173 203173 1 LLLEGVENK Unmodified 1013.5757 0.57571092 1327 P33121 ACSL1 Long-chain-fatty-acid--CoA ligase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 53.789 54.05 2 0.0036824 61772 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 95.741 37.782 50713000 0 0 0 0 0 4488600 0 15211000 4222400 8072500 8891900 0 0 3738800 6087100 30456 1327 27840 255823;255824;255825;255826;255827;255828;255829;255830;255831;255832 203174;203175;203176;203177;203178;203179;203180;203181;203182;203183;203184 203181 11 LLLEIPEK Unmodified 953.57973 0.57973367 3532 Q8WTW3 COG1 Conserved oligomeric Golgi complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 79.483 75.813 2 0.011537 94391 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.01 33.158 89424000 0 83266000 6157900 0 0 0 0 0 0 0 0 0 0 0 0 30457 3532 27841 255833;255834 203185 203185 1 LLLENDSLSK Unmodified 1130.6183 0.61830402 4264 Q9BZF9 UACA Uveal autoantigen with coiled-coil domains and ankyrin repeats yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 57.073 57.22 2 0.0068811 64107 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 63.816 20.008 38043000 0 0 0 4670400 0 0 0 4373600 0 4277500 5126300 7369800 7624900 4600100 0 30458 4264 27842 255835;255836;255837;255838;255839;255840;255841 203186;203187;203188;203189;203190 203188 5 LLLENYEEYAAR Unmodified 1482.7355 0.73545904 2632 Q16763 UBE2S Ubiquitin-conjugating enzyme E2 S yes yes 0 0 0 By MS/MS 10 0 1 1 77.209 76.714 2 0.015906 89134 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 51.092 44.559 3267500 0 0 0 3267500 0 0 0 0 0 0 0 0 0 0 0 30459 2632 27843 255842 203191 203191 1 LLLEQAANEIWESIK Unmodified 1755.9407 0.94070079 644 O95352 ATG7 Ubiquitin-like modifier-activating enzyme ATG7 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 101.03 94.613 2 6.5984E-05 119413 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.23 101.69 17644000 10240000 7403700 0 0 0 0 0 0 0 0 0 0 0 0 0 30460 644 27844 255843;255844 203192;203193 203192 2 LLLEQGAAVAQPNRR Unmodified 1634.9216 0.92163711 4511 Q9HCD6 TANC2 Protein TANC2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 52.428 52.644 3 0.00048884 58081 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.509 28.247 49126000 0 0 0 0 1973100 6983000 2899100 2840300 2971600 4707500 4028400 5184300 5891700 3486200 8160600 30461 4511 27845 255845;255846;255847;255848;255849;255850;255851;255852;255853;255854;255855 203194;203195;203196;203197;203198;203199;203200;203201;203202;203203 203197 10 LLLEQILNK Unmodified 1082.6699 0.66994566 379 O43913 ORC5 Origin recognition complex subunit 5 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 84.603 84.707 2 0.009185 98130 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 67.464 8.5467 11175000 0 0 0 0 0 0 0 0 0 6330000 0 0 0 4844700 0 30462 379 27846 255856;255857 203204;203205 203204 2 LLLFDYDK Unmodified 1025.5433 0.54334816 4311 Q9GZZ9 UBA5 Ubiquitin-like modifier-activating enzyme 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 80.933 80.799 2 0.0064947 92965 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.39 82.012 248160000 0 0 35435000 6173700 6793800 25564000 15646000 18769000 12596000 22595000 17276000 18200000 13673000 18557000 36885000 30463 4311 27847 255858;255859;255860;255861;255862;255863;255864;255865;255866;255867;255868;255869;255870 203206;203207;203208;203209;203210;203211;203212;203213;203214;203215;203216;203217;203218 203209 13 LLLGDAPR Unmodified 853.50215 0.50215205 3768 Q96C00 ZBTB9 Zinc finger and BTB domain-containing protein 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 50.009 50.145 2 0.017693 56903 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 65.252 2.5378 61786000 0 0 0 9760700 0 0 8912400 0 0 0 0 0 15556000 12044000 15514000 30464 3768 27848 255871;255872;255873;255874;255875 203219;203220;203221;203222 203219 4 LLLGDLAPVR Unmodified 1065.6546 0.65462995 4653 Q9NUQ8 ABCF3 ATP-binding cassette sub-family F member 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.267 82.328 2 0.0014814 95164 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 92.439 76.777 261210000 0 0 0 11065000 11759000 24060000 17445000 15811000 13131000 25296000 25594000 35687000 18004000 21128000 42229000 30465 4653 27849 255876;255877;255878;255879;255880;255881;255882;255883;255884;255885;255886;255887 203223;203224;203225;203226;203227;203228;203229;203230;203231;203232;203233;203234 203224 12 LLLIATGK Unmodified 827.54804 0.54803961 4577 Q9NQW6 ANLN Actin-binding protein anillin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.022 63.117 2 0.022757 71881 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 60.895 8.2589 140650000 0 0 0 12713000 10644000 13022000 11125000 8822100 10111000 11183000 12951000 13603000 12212000 9655800 14604000 30466 4577 27850 255888;255889;255890;255891;255892;255893;255894;255895;255896;255897;255898;255899 203235;203236;203237;203238;203239;203240;203241 203235 6 LLLIDWPELK Unmodified 1238.7275 0.72746054 28 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS 4.67 3.77 2 1 1 1 1 94.915 92.266 2 0.0089279 117037 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.948 73.567 9175200 7931800 521850 0 0 0 0 0 0 0 0 0 0 0 0 721490 30467 28 27851 255900;255901;255902 203242;203243 203243 2 LLLIGDSGVGK Unmodified 1070.6336 0.63356015 1911;4338;1824;3689;1830;1649 P62820;P59190;P51153;P61006;Q92930;P61026;Q9H0U4;Q92928 RAB1A;RAB15;RAB13;RAB8A;RAB8B;RAB10;RAB1B;RAB1C Ras-related protein Rab-1A;Ras-related protein Rab-15;Ras-related protein Rab-13;Ras-related protein Rab-8A;Ras-related protein Rab-8B;Ras-related protein Rab-10;Ras-related protein Rab-1B;Putative Ras-related protein Rab-1C no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.91 2.67 3 2 30 2 2 1 3 2 2 3 2 2 3 3 3 3 2 2 72.18 71.578 1;2 2.6897E-05 83427 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 120.12 0 8623300000 706980000 874510000 320650000 319360000 440370000 524820000 531930000 640640000 349600000 675540000 769180000 701820000 493090000 474170000 800640000 30468 1911;1649;1824;3689;1830;4338 27852 255903;255904;255905;255906;255907;255908;255909;255910;255911;255912;255913;255914;255915;255916;255917;255918;255919;255920;255921;255922;255923;255924;255925;255926;255927;255928;255929;255930;255931;255932;255933;255934;255935;255936;255937 203244;203245;203246;203247;203248;203249;203250;203251;203252;203253;203254;203255;203256;203257;203258;203259;203260;203261;203262;203263;203264;203265;203266;203267;203268;203269;203270;203271;203272;203273;203274;203275;203276;203277;203278;203279;203280;203281;203282;203283;203284;203285 203249 39 LLLIGNSSVGK Unmodified 1099.6601 0.66010926 682 O95716 RAB3D Ras-related protein Rab-3D yes yes 0 0 0 By MS/MS 2 0 1 1 71.255 62.989 2 0.024211 83827 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.432 0 3702700 3702700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30469 682 27853 255938 203286 203286 1 LLLINNAGSLGDVSK Unmodified 1512.8512 0.8511575 1352 P35270 SPR Sepiapterin reductase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.799 79.857 2 6.1334E-71 92675 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 183.08 143.93 824640000 0 0 0 25689000 41649000 50554000 41674000 49896000 42295000 99041000 98301000 126530000 55695000 80137000 113180000 30470 1352 27854 255939;255940;255941;255942;255943;255944;255945;255946;255947;255948;255949;255950 203287;203288;203289;203290;203291;203292;203293;203294;203295;203296;203297;203298;203299;203300 203299 13 LLLIPQGAILR Unmodified 1205.786 0.78597847 5000 Q9ULM3 YEATS2 YEATS domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 88.52 88.609 2 0.0079321 102815 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 63.486 62.694 31155000 0 0 0 0 1892200 4311100 1083700 0 0 5532200 4202800 4864600 1701300 1391500 6175800 30471 5000 27855 255951;255952;255953;255954;255955;255956;255957;255958;255959 203301;203302;203303 203301 3 LLLLAGVDRLDK Unmodified 1324.8078 0.80783613 5221 Q9Y570 PPME1 Protein phosphatase methylesterase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 80.244 80.316 3 0.00067565 92368 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.267 40.149 61493000 0 0 0 1127600 0 6227900 0 3193400 0 5307600 3549900 6110500 0 6933000 29043000 30472 5221 27856 255960;255961;255962;255963;255964;255965;255966;255967 203304;203305;203306;203307;203308;203309 203306 6 LLLLDTQQEAGMLLR Oxidation (M) 1728.9444 0.94440596 2654 Q2NL82 TSR1 Pre-rRNA-processing protein TSR1 homolog yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 88.086 88.216 2 0.00087708 101940 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.471 30.866 7238200 0 0 0 0 0 0 0 0 0 3552500 0 0 0 0 3685700 30473 2654 27857 255968;255969 203310;203311 203311 4322 2 LLLLGAGESGK Unmodified 1056.6179 0.61791009 1938;872;790 P04899;P11488;P09471;P19087;A8MTJ3;P38405;P08754;P63092;Q5JWF2 GNAI2;GNAT1;GNAO1;GNAT2;GNAT3;GNAL;GNAI3;GNAS Guanine nucleotide-binding protein G(i) subunit alpha-2;Guanine nucleotide-binding protein G(t) subunit alpha-1;Guanine nucleotide-binding protein G(o) subunit alpha;Guanine nucleotide-binding protein G(t) subunit alpha-2;Guanine nucleotide-binding protein G(t) subunit alpha-3;Guanine nucleotide-binding protein G(olf) subunit alpha;Guanine nucleotide-binding protein G(k) subunit alpha;Guanine nucleotide-binding protein G(s) subunit alpha isoforms short;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.41 3.11 4 2 23 2 3 1 2 2 2 2 2 2 2 2 1 2 2 2 66.313 65.18 2 3.1966E-05 85770 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.3 0 905940000 207640000 65326000 41019000 43639000 41422000 47321000 37620000 39693000 33619000 50589000 57527000 61568000 57849000 57592000 63516000 30474 790;872;1938 27858 255970;255971;255972;255973;255974;255975;255976;255977;255978;255979;255980;255981;255982;255983;255984;255985;255986;255987;255988;255989;255990;255991;255992;255993;255994;255995;255996;255997;255998 203312;203313;203314;203315;203316;203317;203318;203319;203320;203321;203322;203323;203324;203325;203326;203327;203328;203329;203330;203331;203332;203333 203316 20 LLLLGTGESGK Unmodified 1086.6285 0.62847478 1257 P29992;P50148;O95837 GNA11;GNAQ;GNA14 Guanine nucleotide-binding protein subunit alpha-11;Guanine nucleotide-binding protein G(q) subunit alpha;Guanine nucleotide-binding protein subunit alpha-14 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.24 2 1 10 1 1 1 1 1 1 1 1 1 1 1 1 1 67.384 66.165 2 0.00047003 88466 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 100.57 24.744 60110000 19671000 1454000 4455100 3514600 2834300 2608800 0 2449800 2055400 3542000 4912400 0 4028600 4448900 4135600 30475 1257 27859 255999;256000;256001;256002;256003;256004;256005;256006;256007;256008;256009;256010;256011 203334;203335;203336;203337;203338;203339;203340;203341;203342;203343;203344;203345 203338 12 LLLLLPEVDR Unmodified 1179.7227 0.72270951 3037 Q76L83 ASXL2 Putative Polycomb group protein ASXL2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 90.378 90.441 2 0.01329 104177 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 51.346 48.978 4735500 0 0 0 0 710080 0 699990 0 0 1169300 0 1194200 0 961840 0 30476 3037 27860 256012;256013;256014;256015;256016 203346;203347;203348 203347 3 LLLLVQGK Unmodified 882.59024 0.59023878 449 O60936 NOL3 Nucleolar protein 3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.966 71.04 2 0.017995 80629 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.803 27.158 52982000 0 0 0 2504700 2320200 2590700 1998100 2901200 2064100 3931600 6747000 5557700 4544400 4837800 12984000 30477 449 27861 256017;256018;256019;256020;256021;256022;256023;256024;256025;256026;256027;256028 203349;203350;203351;203352;203353;203354 203350 6 LLLNELAK Unmodified 912.56442 0.56441796 610 O94964 SOGA1 Protein SOGA1;N-terminal form;C-terminal 80 kDa form yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.367 69.446 2 0.041524 79969 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 49.933 13.346 45436000 0 0 0 2953500 2646200 3590200 3708700 2289900 3491100 3575800 4070100 5503200 4459000 3447700 5700300 30478 610 27862 256029;256030;256031;256032;256033;256034;256035;256036;256037;256038;256039;256040 203355 203355 1 LLLNHASDNIPK Unmodified 1333.7354 0.73539946 5082 Q9Y248 GINS2 DNA replication complex GINS protein PSF2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 6.8 3.92 6 9 2 2 2 2 1 1 1 1 1 2 53.087 50.711 2;3 1.5295E-07 70354 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 119.22 76.625 650440000 338030000 131400000 81366000 11210000 2118700 0 9001400 13030000 0 14736000 0 0 0 13792000 35752000 30479 5082 27863 256041;256042;256043;256044;256045;256046;256047;256048;256049;256050;256051;256052;256053;256054;256055 203356;203357;203358;203359;203360;203361;203362;203363;203364;203365;203366 203364 10 LLLNNDNLLR Unmodified 1196.6877 0.68772099 1705;1524 P47755;P52907 CAPZA2;CAPZA1 F-actin-capping protein subunit alpha-2;F-actin-capping protein subunit alpha-1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.058 76.119 2 0.00050063 87091 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 124.98 81.175 1382700000 0 0 0 69071000 65914000 88402000 84598000 87159000 69476000 116000000 155710000 165610000 86827000 108060000 285900000 30480 1524;1705 27864 256056;256057;256058;256059;256060;256061;256062;256063;256064;256065;256066;256067 203367;203368;203369;203370;203371;203372;203373;203374;203375;203376;203377;203378 203370 11 LLLNNGAK Unmodified 841.50215 0.50215205 1013 P15121 AKR1B1 Aldose reductase yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 29.838 30.121 2 0.006773 32026 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 97.596 22.879 136090000 0 0 0 0 4825900 0 5702900 3365000 0 0 24634000 21888000 0 18963000 56715000 30481 1013 27865 256068;256069;256070;256071;256072;256073;256074 203379;203380;203381;203382 203380 3 LLLNVTPTVRPDADQMTK Oxidation (M) 2027.0721 0.072125671 2932 Q6P3W7 SCYL2 SCY1-like protein 2 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 71.385 71.538 3 0.00029734 82217 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 50.387 32.898 349420000 0 0 0 0 22088000 0 37283000 40742000 29444000 42036000 40831000 58526000 0 32503000 45968000 30482 2932 27866 256075;256076;256077;256078;256079;256080;256081;256082;256083 203383;203384;203385;203386;203387;203388;203389;203390;203391 203383 4561 9 LLLNYAVR Unmodified 960.57565 0.57565135 3695 Q92989 CLP1 Polyribonucleotide 5'-hydroxyl-kinase Clp1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.374 69.453 2 0.0077021 79684 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 88.734 48.049 41067000 0 0 0 1635200 1925600 2653500 2209500 2730400 1920200 4113000 3153300 4460800 3946500 3723300 8595200 30483 3695 27867 256084;256085;256086;256087;256088;256089;256090;256091;256092;256093;256094;256095 203392;203393;203394;203395;203396;203397;203398;203399;203400 203396 9 LLLPDDEK Unmodified 941.50696 0.50696266 5102 Q9Y2H2 INPP5F Phosphatidylinositide phosphatase SAC2 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 49.133 49.421 2 0.011003 55439 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 77.923 45.987 68333000 0 0 0 0 1568000 0 0 0 0 0 0 26311000 0 13395000 27059000 30484 5102 27868 256096;256097;256098;256099 203401 203401 1 LLLPDDFK Unmodified 959.53278 0.53278348 3990 Q96SI1 KCTD15 BTB/POZ domain-containing protein KCTD15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 6 12 1 2 3 1 1 1 1 1 1 1 1 1 1 1 1 78.446 77.079 2 0.0068946 88662 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.906 0 397280000 12017000 286180000 18573000 3432800 3555400 5375900 4100200 5248400 4062200 6926900 11718000 8077800 5759100 7465100 14784000 30485 3990 27869 256100;256101;256102;256103;256104;256105;256106;256107;256108;256109;256110;256111;256112;256113;256114;256115;256116;256117 203402;203403;203404;203405;203406;203407;203408;203409;203410;203411;203412;203413;203414;203415 203407 14 LLLPGELAK Unmodified 952.59572 0.59571809 432;833 Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;P57053;O60814;Q96A08;Q8N257;Q16778;P33778;P23527;P06899 HIST1H2BL;HIST1H2BM;HIST1H2BN;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;H2BFS;HIST1H2BK;HIST1H2BA;HIST3H2BB;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 1-A;Histone H2B type 3-B;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 73.729 73.807 2 0.0051376 85041 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 82.452 2.8555 1726500000 0 0 0 280740000 0 211390000 193550000 152220000 132270000 0 219680000 229370000 164180000 143120000 0 30486 432;833 27870 256118;256119;256120;256121;256122;256123;256124;256125;256126 203416;203417;203418;203419;203420;203421;203422;203423;203424;203425;203426 203418 11 LLLPGVIK Unmodified 851.58443 0.58442512 1613 P49916 LIG3 DNA ligase 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 78.511 78.663 2 0.030584 90391 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.441 39.809 24886000 0 0 0 0 0 0 0 0 0 3801200 2891300 3418600 4122500 4364200 6288600 30487 1613 27871 256127;256128;256129;256130;256131;256132 203427;203428 203427 2 LLLPHAFSR Unmodified 1052.6131 0.61309948 3653 Q92733 PRCC Proline-rich protein PRCC yes yes 0 0 0 By MS/MS 10 0 1 1 65.279 65.831 2 0.014773 74527 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.96 35.031 20688000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20688000 30488 3653 27872 256133 203429 203429 1 LLLPTPTVK Unmodified 980.62702 0.62701821 3255 Q8IX12 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.878 73.944 2 0.0031541 84891 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 92.439 25.757 2151000000 0 0 0 113030000 111010000 149290000 168540000 167720000 139970000 190020000 220890000 202980000 171540000 192120000 323890000 30489 3255 27873 256134;256135;256136;256137;256138;256139;256140;256141;256142;256143;256144;256145 203430;203431;203432;203433;203434;203435;203436;203437;203438;203439;203440;203441;203442;203443 203441 14 LLLPWLEAR Unmodified 1109.6597 0.65971533 2040 Q00610 CLTC Clathrin heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 92.975 93.109 2 0.028187 107928 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.097 43.788 32884000 0 0 0 0 0 2991700 747650 1349000 1666600 2500600 2278800 2783600 866730 1766000 15933000 30490 2040 27874 256146;256147;256148;256149;256150;256151;256152;256153;256154;256155 203444;203445;203446 203444 3 LLLQALQAGPEGAR Unmodified 1435.8147 0.81471242 4499 Q9HB96 FANCE Fanconi anemia group E protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.297 78.403 2 1.3757E-12 90591 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 112.15 102.71 71821000 0 0 0 0 4351300 6298400 3335900 5963600 4177800 6633600 6896400 13301000 5945000 6431300 8486300 30491 4499 27875 256156;256157;256158;256159;256160;256161;256162;256163;256164;256165;256166;256167 203447;203448;203449;203450;203451;203452;203453;203454;203455;203456;203457;203458 203447 11 LLLQDSQNVEALR Unmodified 1497.8151 0.81510635 3099 Q7Z4L5 TTC21B Tetratricopeptide repeat protein 21B yes yes 0 0 0 By MS/MS 10 0 1 1 71.544 71.797 2 0.0051158 82689 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 49.5 24.115 2845300 0 0 0 0 0 0 0 0 0 0 2845300 0 0 0 0 30492 3099 27876 256168 203459 203459 1 LLLQGEADQSLLTFIDK Unmodified 1903.0302 0.030244081 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.38 0.484 5 3 2 5 1 98.201 93.836 2;3 2.3379E-63 116663 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 163.7 146.3 584820000 57320000 521610000 5884600 0 0 0 0 0 0 0 0 0 0 0 0 30493 1986 27877 256169;256170;256171;256172;256173;256174;256175;256176 203460;203461;203462;203463;203464;203465;203466 203465 7 LLLQGLMDSVEAK Oxidation (M) 1431.7643 0.76431633 2828 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.05 3.77 6 2 13 2 4 2 1 1 1 1 1 1 2 2 1 1 1 80.744 78.843 2 2.5673E-21 96308 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 143.89 121.8 312610000 129950000 65952000 36089000 0 4432400 8715200 5588800 0 0 12973000 10575000 13544000 3807500 7488100 13503000 30494 2828 27878 256177;256178;256179;256180;256181;256182;256183;256184;256185;256186;256187;256188;256189;256190;256191;256192;256193;256194;256195;256196;256197 203467;203468;203469;203470;203471;203472;203473;203474;203475;203476;203477;203478;203479;203480;203481;203482;203483;203484;203485;203486;203487;203488;203489 203482 4468 22 LLLQGLMDSVEAK Unmodified 1415.7694 0.76940171 2828 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.5 2.93 4 1 1 1 3 1 1 93.674 89.966 2 4.5548E-34 113090 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 177.57 145.16 315850000 116820000 193150000 1854800 0 0 0 0 0 0 0 0 0 0 0 4029200 30495 2828 27878 256198;256199;256200;256201;256202;256203 203490;203491;203492;203493;203494;203495 203490 6 LLLQQNK Unmodified 855.5178 0.51780212 3012 Q6ZSZ5 ARHGEF18 Rho guanine nucleotide exchange factor 18 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 27.018 27.206 2 0.023439 29205 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 85.061 0 56284000 0 0 0 2696600 2970900 4347000 4199100 3273500 3315400 0 7890200 9968300 0 5498000 12125000 30496 3012 27879 256204;256205;256206;256207;256208;256209;256210;256211;256212;256213 203496;203497;203498 203496 3 LLLQQRSDAK Unmodified 1170.6721 0.67207093 2356 Q13907 IDI1 Isopentenyl-diphosphate Delta-isomerase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 2 2 1 30.58 25.901 2;3 0.015831 35618 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 102.95 74.729 464890000 433720000 25200000 5965500 0 0 0 0 0 0 0 0 0 0 0 0 30497 2356 27880 256214;256215;256216;256217;256218 203499;203500;203501 203500 2 LLLQVQHASK Unmodified 1135.6713 0.67134264 963 P12236;P12235;P05141 SLC25A6;SLC25A4;SLC25A5 ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed;ADP/ATP translocase 1;ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 41.569 40.489 2 0.0047506 58551 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.136 33.587 47838000 7348900 0 0 9124500 3711300 0 0 7287500 4373900 0 0 9920600 0 6071100 0 30498 963 27881 256219;256220;256221;256222;256223;256224;256225 203502;203503;203504;203505;203506 203503 5 LLLSDMWSSK Oxidation (M) 1194.5955 0.59546009 2346 Q13835 PKP1 Plakophilin-1 yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 70.313 70.06 2 0.0051216 81176 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 61.65 49.123 10865000 0 0 0 8015000 0 0 0 0 0 0 0 0 2850000 0 0 30499 2346 27882 256226;256227 203507 203507 3817 1 LLLSEEEIEK Unmodified 1201.6442 0.64418442 4483 Q9HAB8 PPCS Phosphopantothenate--cysteine ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 68.877 63.236 2 0.0023793 77408 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 105.52 46.54 472910000 26864000 439800000 6242900 0 0 0 0 0 0 0 0 0 0 0 0 30500 4483 27883 256228;256229;256230;256231 203508;203509;203510;203511;203512;203513 203511 6 LLLSGTADGADLR Unmodified 1300.6987 0.69867961 472 O75179 ANKRD17 Ankyrin repeat domain-containing protein 17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 66.594 66.504 2 0.00071566 77101 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 93.561 46.374 141420000 0 0 0 15553000 16649000 24284000 22180000 25366000 0 36023000 0 0 1365600 0 0 30501 472 27884 256232;256233;256234;256235;256236;256237;256238 203514;203515;203516;203517;203518 203518 2 LLLSIPHSDLLDYPK Unmodified 1722.9556 0.95562257 4923 Q9UIA9 XPO7 Exportin-7 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 94.695 88.197 3 0.0030064 111800 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.403 33.297 25777000 15831000 9946800 0 0 0 0 0 0 0 0 0 0 0 0 0 30502 4923 27885 256239;256240 203519;203520;203521 203521 3 LLLSPGGSGSSSLQVTK Unmodified 1629.8938 0.8937506 4284 Q9C0B7 TANGO6 Transport and Golgi organization protein 6 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.24 2 1 10 1 2 1 1 1 1 1 1 1 1 1 1 71.335 70.07 2 0.00010307 90163 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 109.44 77.027 94207000 29059000 27803000 0 1239500 2693100 5534400 3915800 3135700 0 3946700 5500000 4087000 3508400 3784000 0 30503 4284 27886 256241;256242;256243;256244;256245;256246;256247;256248;256249;256250;256251;256252;256253 203522;203523;203524;203525;203526;203527;203528;203529;203530;203531;203532 203526 11 LLLSSETPIEGK Unmodified 1285.7129 0.71293269 4531 Q9HDC9 APMAP Adipocyte plasma membrane-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.231 65.319 2 0.00028841 73807 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 82.749 60.899 89273000 0 0 0 8262600 6315200 3861000 6349400 5858900 5186700 8021300 9887800 9502800 9515200 7563400 8948400 30504 4531 27887 256254;256255;256256;256257;256258;256259;256260;256261;256262;256263;256264;256265 203533;203534;203535;203536;203537;203538;203539;203540;203541;203542;203543;203544 203540 12 LLLSSVTK Unmodified 859.53787 0.53786886 4859 Q9UBT7 CTNNAL1 Alpha-catulin yes yes 0 0 0 By matching By matching By MS/MS By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 52.162 52.524 2 0.040979 58226 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.127 37.138 20920000 0 0 0 0 0 3026600 0 2506400 0 4109200 2863000 3020600 0 0 5394000 30505 4859 27888 256266;256267;256268;256269;256270;256271 203545 203545 1 LLLSTLTLLSK Unmodified 1200.7693 0.76932535 3814 Q96EK6 GNPNAT1 Glucosamine 6-phosphate N-acetyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 91.804 91.871 2 0.0096867 106772 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 76.465 57.859 24202000 0 0 0 1162500 1726700 3368900 693470 417680 1286400 5330900 3696600 4792600 0 0 1726600 30506 3814 27889 256272;256273;256274;256275;256276;256277;256278;256279;256280;256281 203546;203547;203548;203549;203550;203551 203547 4 LLLSTSLDAK Unmodified 1059.6176 0.61757574 2860 Q68E01 INTS3 Integrator complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 66.603 66.747 2 0.034473 76757 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 56.729 21.922 4511600 0 0 0 0 0 0 0 0 1979700 2532000 0 0 0 0 0 30507 2860 27890 256282;256283;256284 203552;203553 203552 2 LLLSYGADPTLATYSGR Unmodified 1796.9309 0.93086439 2989 Q6W2J9 BCOR BCL-6 corepressor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.196 82.257 2 1.3094E-45 95168 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 151.78 105.9 100610000 0 0 0 1750000 4984600 9950800 5430800 7077900 6244100 14170000 8902100 10928000 4697400 7447800 19030000 30508 2989 27891 256285;256286;256287;256288;256289;256290;256291;256292;256293;256294;256295;256296 203554;203555;203556;203557;203558;203559;203560;203561;203562;203563;203564;203565 203555 12 LLLTAQQMLQDSK Unmodified 1487.8018 0.80176447 2603 Q16512 PKN1 Serine/threonine-protein kinase N1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 79.091 78.441 2 4.1731E-33 99309 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 169.93 121.14 108480000 22415000 0 0 0 8558600 10044000 0 8933800 10834000 10008000 7152200 4707700 5855400 7269600 12700000 30509 2603 27892 256297;256298;256299;256300;256301;256302;256303;256304;256305;256306;256307 203566;203567;203568;203569;203570;203571;203572;203573;203574 203569 6 LLLTAQQMLQDSK Oxidation (M) 1503.7967 0.79667909 2603 Q16512 PKN1 Serine/threonine-protein kinase N1 yes yes 0 1 0 By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 59.533 59.801 2 0.0068767 68499 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 43.297 20.656 17921000 0 0 0 0 0 2856200 4139500 0 0 2971800 0 2597300 2995000 0 2360700 30510 2603 27892 256308;256309;256310;256311;256312;256313;256314 203575;203576;203577 203577 4243 3 LLLTEFR Unmodified 890.52255 0.52255314 448 O60934 NBN Nibrin yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.489 74.554 2 0.02407 85854 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 100.07 28.046 190370000 0 0 0 7664600 9114900 15265000 14069000 10482000 11882000 19956000 14918000 21777000 16674000 19660000 28912000 30511 448 27893 256315;256316;256317;256318;256319;256320;256321;256322;256323;256324;256325;256326 203578;203579;203580;203581 203580 4 LLLTPWVK Unmodified 968.60589 0.60588884 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 84.13 84.262 2 0.022985 97174 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.709 60.709 24170000 0 0 0 0 0 0 0 0 2772400 3662700 0 5002800 2522300 2473900 7736300 30512 2378 27894 256327;256328;256329;256330;256331;256332 203582 203582 1 LLLTSTEK Unmodified 903.5277 0.5276981 3042 Q7L0Y3 TRMT10C Mitochondrial ribonuclease P protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 43.692 38.399 2 0.031244 53037 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.213 50.214 121000000 5804200 110600000 4593800 0 0 0 0 0 0 0 0 0 0 0 0 30513 3042 27895 256333;256334;256335 203583 203583 1 LLLTTQFPFK Unmodified 1206.7012 0.70124579 4837 Q9UBD5 ORC3 Origin recognition complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 87.73 87.839 2 0.0016854 101879 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 89.355 73.813 29527000 0 0 0 0 1339000 4104700 1616500 2043700 2216300 2825500 1950200 2167700 1373400 2086000 7803700 30514 4837 27896 256336;256337;256338;256339;256340;256341;256342;256343;256344;256345;256346 203584;203585;203586;203587;203588;203589;203590;203591;203592;203593;203594;203595 203585 12 LLLTVDTTDDNFMPK Unmodified 1721.8546 0.8545879 2774 Q5T447 HECTD3 E3 ubiquitin-protein ligase HECTD3 yes yes 0 0 0 By MS/MS 2 0 1 1 90.285 85.389 2 0.00055524 106105 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.593 52.739 13555000 0 13555000 0 0 0 0 0 0 0 0 0 0 0 0 0 30515 2774 27897 256347 203596 203596 1 LLLVQTGSSSPCLDLSR Unmodified 1844.9666 0.96659797 4666 Q9NVE7 PANK4 Pantothenate kinase 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 82.259 82.274 2 2.1093E-28 95155 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 138.94 124.25 58725000 0 0 0 5879800 17126000 27555000 2111600 1719200 1627600 0 2706200 0 0 0 0 30516 4666 27898 256348;256349;256350;256351;256352;256353;256354;256355 203597;203598;203599;203600;203601;203602 203602 6 LLLWAQNELDQK Unmodified 1469.7878 0.78782897 4702 Q9NWU2 GID8 Glucose-induced degradation protein 8 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 86.996 81.861 2 2.7639E-10 104133 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 153.05 142.76 67621000 43758000 18856000 5008000 0 0 0 0 0 0 0 0 0 0 0 0 30517 4702 27899 256356;256357;256358 203603;203604;203605 203604 3 LLLYDGK Unmodified 820.46945 0.46945494 1638 P50851 LRBA Lipopolysaccharide-responsive and beige-like anchor protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 57.495 51.518 2 0.031008 69843 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.986 46.013 62014000 10259000 44038000 7716600 0 0 0 0 0 0 0 0 0 0 0 0 30518 1638 27900 256359;256360;256361 203606 203606 1 LLLYDTVQSELEEK Unmodified 1678.8665 0.8665328 2751 Q5PSV4 BRMS1L Breast cancer metastasis-suppressor 1-like protein yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 88.535 84.881 2 0.00060152 105554 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.15 76.995 29282000 0 27626000 1655900 0 0 0 0 0 0 0 0 0 0 0 0 30519 2751 27901 256362;256363 203607;203608 203607 2 LLMDINLK Oxidation (M) 974.54705 0.54705333 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 1 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 62.066 62.114 2 0.0073199 70530 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 77.674 9.3619 25951000 0 0 0 2451600 0 3912600 0 0 2750600 6080400 0 6739000 0 4016900 0 30520 3023 27902 256364;256365;256366;256367;256368;256369;256370 203609;203610;203611;203612 203612 4631 4 LLMDINLK Unmodified 958.55214 0.55213871 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 78.419 78.523 2 0.014742 90656 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 69.998 7.2812 51121000 0 0 0 0 3475300 3007000 3358300 3415900 4421200 6610900 4308800 5590400 3100900 6214700 7617300 30521 3023 27902 256371;256372;256373;256374;256375;256376;256377;256378;256379;256380;256381 203613;203614 203614 2 LLMDMALFMGR Oxidation (M) 1312.6342 0.63417056 1707 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 0 1 0 By MS/MS 2 0 1 1 57.898 52.067 2 0.026985 67106 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 52.716 7.963 12690000 0 12690000 0 0 0 0 0 0 0 0 0 0 0 0 0 30522 1707 27903 256382 203615 203615 1 LLMENPYEGPDSQK Oxidation (M) 1635.745 0.74503745 4183 Q9BVC3 DSCC1 Sister chromatid cohesion protein DCC1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 46.011 45.399 2 8.8784E-44 56791 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 167.12 157.23 184840000 0 63315000 0 7012200 7948600 8337300 11556000 7971700 8912100 10287000 15643000 18339000 8915400 5716400 10880000 30523 4183 27904 256383;256384;256385;256386;256387;256388;256389;256390;256391;256392;256393;256394;256395;256396 203616;203617;203618;203619;203620;203621;203622;203623;203624;203625;203626;203627 203619 5669 12 LLMENPYEGPDSQK Unmodified 1619.7501 0.75012283 4183 Q9BVC3 DSCC1 Sister chromatid cohesion protein DCC1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 62.144 60.224 2 2.2882E-24 76072 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 158.41 149.05 90177000 0 64043000 0 0 0 13259000 0 0 0 12876000 0 0 0 0 0 30524 4183 27904 256397;256398;256399 203628;203629;203630;203631 203631 4 LLMFPESR Oxidation (M) 1007.511 0.51100218 3284 Q8IYI6 EXOC8 Exocyst complex component 8 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 61.449 61.347 2 0.010538 70134 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 67.981 42.087 26101000 0 0 0 4510800 0 11038000 6064700 0 4487700 0 0 0 0 0 0 30525 3284 27905 256400;256401;256402;256403 203632;203633;203634 203632 4889 3 LLMFPESR Unmodified 991.51609 0.51608756 3284 Q8IYI6 EXOC8 Exocyst complex component 8 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 72.802 72.898 2 0.044838 83142 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.756 28.274 23556000 0 0 0 2006100 0 0 1784900 2477900 0 0 4517500 0 2530500 4273900 5964900 30526 3284 27905 256404;256405;256406;256407;256408;256409;256410 203635 203635 1 LLMLDDQR Unmodified 1002.5168 0.51681584 770 P04062 GBA Glucosylceramidase yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 58.418 58.357 2 0.01266 67411 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 74.127 39.32 21326000 0 0 0 12629000 0 0 2193500 0 0 0 6503700 0 0 0 0 30527 770 27906 256411;256412;256413 203636 203636 1 LLMLGLDNAGK Oxidation (M) 1159.6271 0.62709457 1370 P36404 ARL2 ADP-ribosylation factor-like protein 2 yes yes 0 1 0 By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 69.609 69.624 2 0.0021085 79623 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.485 26.351 47402000 0 0 0 3117500 3978600 5285600 3885000 2965900 2468000 4991100 0 9968500 5535800 5206000 0 30528 1370 27907 256414;256415;256416;256417;256418;256419;256420;256421;256422;256423 203637;203638;203639 203639 2129 2 LLMLIDSSTLEPTK Oxidation (M) 1575.843 0.84296058 2269 Q13315 ATM Serine-protein kinase ATM yes yes 0 1 0 By matching By MS/MS 2 0 2 1 1 85.304 81.695 2 0.027545 98969 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 42.336 28.129 21553000 0 20498000 1054900 0 0 0 0 0 0 0 0 0 0 0 0 30529 2269 27908 256424;256425 203640 203640 1 LLMMAGIDDCYTSAR 2 Oxidation (M) 1747.7579 0.7579271 1027 P15880 RPS2 40S ribosomal protein S2 yes yes 0 2 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 57.922 58.239 2 0.0001075 65629 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.262 57.852 34627000 0 0 0 0 0 3603400 0 0 0 0 0 8485100 9122400 6145900 7270400 30530 1027 27909 256426;256427;256428;256429;256430;256431 203641;203642;203643;203644;203645 203641 1421;1422 4 LLMMDYELR 2 Oxidation (M) 1214.5675 0.56753078 3074 Q7Z2Y8 GVINP1 Interferon-induced very large GTPase 1 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 24.709 24.958 3 0.014615 26692 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 50.04 43.604 87201000 0 0 0 0 8746800 9990200 7635200 6001900 0 8397000 7505300 9735700 11810000 7369700 10010000 30531 3074 27910 256432;256433;256434;256435;256436;256437;256438;256439;256440;256441 203646;203647;203648;203649;203650;203651;203652;203653;203654 203647 4686;4687 0 LLMSEDYFTQAMEVK 2 Oxidation (M) 1835.8321 0.8321379 1464 P42704 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 2 0 By MS/MS 2.5 0.5 1 1 2 77.476 73.349 2 0.0005536 91516 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.247 78.812 37987000 0 37987000 0 0 0 0 0 0 0 0 0 0 0 0 0 30532 1464 27911 256442;256443 203655 203655 2298;2299 1 LLMSEDYFTQAMEVK Oxidation (M) 1819.8372 0.83722328 1464 P42704 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 1 0 By matching By MS/MS 2.33 0.471 2 1 1 2 85.24 80.835 2 1.3166E-15 99453 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.74 104.57 56105000 685640 55419000 0 0 0 0 0 0 0 0 0 0 0 0 0 30533 1464 27911 256444;256445;256446 203656;203657 203656 2298;2299 2 LLMTEVAWTK Oxidation (M) 1206.6318 0.63184559 1006 P14735 IDE Insulin-degrading enzyme yes yes 0 1 0 By MS/MS 10 0 1 1 66.297 65.61 2 0.0072585 75846 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 54.982 32.851 4947500 0 0 0 4947500 0 0 0 0 0 0 0 0 0 0 0 30534 1006 27912 256447 203658 203658 1375 1 LLMTEVAWTK Unmodified 1190.6369 0.63693097 1006 P14735 IDE Insulin-degrading enzyme yes yes 0 0 0 By MS/MS 10 0 1 1 78.802 78.35 2 0.003743 90962 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 75.378 40.571 4247300 0 0 0 4247300 0 0 0 0 0 0 0 0 0 0 0 30535 1006 27912 256448 203659 203659 1 LLMTVESAK Oxidation (M) 1006.5369 0.53688258 3138 Q86TU7 SETD3 Histone-lysine N-methyltransferase setd3 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 35.627 30.932 2 0.038441 38521 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 59.35 25.799 68474000 0 68474000 0 0 0 0 0 0 0 0 0 0 0 0 0 30536 3138 27913 256449;256450 203660 203660 1 LLMYSFVNDK Oxidation (M) 1244.6111 0.61111015 2722 Q5D1E8;Q9C0D7;Q5HYM0 ZC3H12A;ZC3H12C;ZC3H12B Ribonuclease ZC3H12A;Probable ribonuclease ZC3H12C;Probable ribonuclease ZC3H12B yes no 0 1 0 By MS/MS 10 0 1 1 68.01 68.504 2 0.027985 78001 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.908 34.223 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30537 2722 27914 256451 203661 203661 1 LLMYSFVNDK Unmodified 1228.6162 0.61619553 2722 Q5D1E8;Q9C0D7;Q5HYM0 ZC3H12A;ZC3H12C;ZC3H12B Ribonuclease ZC3H12A;Probable ribonuclease ZC3H12C;Probable ribonuclease ZC3H12B yes no 0 0 0 By MS/MS 10 0 1 1 78.649 78.895 2 0.045711 90765 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.327 20.487 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30538 2722 27914 256452 203662 203662 1 LLNAAQEREK Unmodified 1170.6357 0.63568542 2287 Q13426 XRCC4 DNA repair protein XRCC4 yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 20.979 16.899 2;3 0.0021474 21376 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 102.06 38.021 274290000 256040000 0 18248000 0 0 0 0 0 0 0 0 0 0 0 0 30539 2287 27915 256453;256454;256455 203663;203664 203664 1 LLNALEK Unmodified 799.48035 0.48035398 2783 Q5T764 IFIT1B Interferon-induced protein with tetratricopeptide repeats 1B yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 37.672 37.801 2 0.040879 41548 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 68.398 3.851 275490000 0 0 0 19710000 26146000 27017000 24756000 23938000 0 35710000 32332000 0 35053000 25205000 25624000 30540 2783 27916 256456;256457;256458;256459;256460;256461;256462;256463;256464;256465 203665 203665 1 LLNAYDEHQTLLK Unmodified 1556.8199 0.81985737 3145 Q86UA1 PRPF39 Pre-mRNA-processing factor 39 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 68.172 62.192 3 0.0073929 80345 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 48.532 40.792 66947000 24643000 23513000 18790000 0 0 0 0 0 0 0 0 0 0 0 0 30541 3145 27917 256466;256467;256468 203666;203667;203668 203666 3 LLNDEDPVVVTK Unmodified 1340.7187 0.71874635 1010 P14923 JUP Junction plakoglobin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 59.599 58.933 2 2.3901E-05 66699 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 105.86 60.702 1339700000 0 171680000 0 343860000 58370000 44540000 58622000 264380000 40578000 51203000 67349000 74511000 105920000 33110000 25554000 30542 1010 27918 256469;256470;256471;256472;256473;256474;256475;256476;256477;256478;256479;256480;256481;256482 203669;203670;203671;203672;203673;203674;203675;203676;203677;203678;203679;203680;203681;203682;203683;203684;203685 203681 16 LLNDEDQVVVNK Unmodified 1384.7198 0.71980898 1341 P35222 CTNNB1 Catenin beta-1 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 51.061 47.872 2 0.010573 55677 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 46.352 25.405 32862000 0 29390000 0 3472000 0 0 0 0 0 0 0 0 0 0 0 30543 1341 27919 256483;256484 203686;203687 203687 2 LLNELQR Unmodified 884.50797 0.50796571 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 37.486 37.587 2 0.03857 40327 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 69.432 2.3974 32478000 0 0 0 3076900 0 4956800 3631700 4677000 2991600 5659900 4465700 0 0 3018400 0 30544 5049 27920 256485;256486;256487;256488;256489;256490;256491;256492 203688 203688 1 LLNENSYVPR Unmodified 1203.6248 0.62478638 762 P02786 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.395 51.53 2 0.00014652 57812 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 163.99 113.86 360140000 0 0 0 27774000 30491000 26957000 24788000 41613000 19780000 39554000 32431000 47339000 0 26826000 42587000 30545 762 27921 256493;256494;256495;256496;256497;256498;256499;256500;256501;256502;256503;256504 203689;203690;203691;203692;203693;203694;203695;203696;203697;203698;203699;203700 203693 12 LLNENSYVPREAGSQK Unmodified 1803.9115 0.91152593 762 P02786 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 51.666 45.677 3 0.00038889 62599 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.69 46.001 40690000 25577000 0 15113000 0 0 0 0 0 0 0 0 0 0 0 0 30546 762 27922 256505;256506 203701;203702;203703 203701 3 LLNFLMK Oxidation (M) 893.50446 0.50446024 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 74.511 74.559 2 0.02693 85645 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 68.398 23.453 269570000 0 0 0 15232000 12521000 26980000 16668000 15886000 15736000 25943000 21137000 0 25815000 31504000 62145000 30547 1986 27923 256507;256508;256509;256510;256511;256512;256513;256514;256515;256516;256517 203704;203705;203706;203707;203708;203709;203710;203711;203712;203713;203714 203708 11 LLNFPTIVER Unmodified 1200.6867 0.68665836 353 O43681 ASNA1 ATPase ASNA1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 83.96 84.025 2 0.00089647 97387 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 134.05 80.882 480920000 0 0 0 13304000 20280000 53962000 23665000 45911000 25228000 50441000 40622000 43193000 32449000 33950000 97912000 30548 353 27924 256518;256519;256520;256521;256522;256523;256524;256525;256526;256527;256528;256529 203715;203716;203717;203718;203719;203720;203721;203722 203715 7 LLNFYEK Unmodified 925.49092 0.49091866 1069 P18074 ERCC2 TFIIH basal transcription factor complex helicase XPD subunit yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 59.612 59.91 2 0.049912 67555 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 63.306 42.824 15618000 0 0 0 0 0 0 2404000 0 0 0 3181600 0 2347800 3377900 4306600 30549 1069 27925 256530;256531;256532;256533;256534 203723 203723 1 LLNGPGDVETGTSITVPQK Unmodified 1925.0106 0.010571271 4504 Q9HC07 TMEM165 Transmembrane protein 165 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 71.39 70.801 2 5.2728E-31 87493 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.16 102.53 169990000 0 108370000 0 2475300 3136300 6085100 4561900 3722700 4045800 6306800 5466000 7051400 5016400 6005100 7748400 30550 4504 27926 256535;256536;256537;256538;256539;256540;256541;256542;256543;256544;256545;256546;256547;256548 203724;203725;203726;203727;203728;203729;203730;203731;203732;203733;203734 203726 11 LLNHILDNSEDDTK Unmodified 1625.7897 0.78967946 2460 Q14997 PSME4 Proteasome activator complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 61.549 54.99 2;3 0.0028651 74373 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.46 48.39 53280000 22711000 26250000 4318000 0 0 0 0 0 0 0 0 0 0 0 0 30551 2460 27927 256549;256550;256551;256552 203735;203736;203737 203735 2 LLNIWQER Unmodified 1070.5873 0.58727866 4569 Q9NQG5 RPRD1B Regulation of nuclear pre-mRNA domain-containing protein 1B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.726 74.791 2 0.0063839 86128 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 101.33 48.644 89485000 0 0 0 3084500 3688700 8957700 5956000 11412000 4867500 6649200 9842700 11598000 6365100 5927700 11136000 30552 4569 27928 256553;256554;256555;256556;256557;256558;256559;256560;256561;256562;256563;256564 203738;203739;203740;203741;203742;203743;203744;203745;203746;203747;203748;203749 203747 12 LLNLYIK Unmodified 875.54804 0.54803961 3094;456 Q7Z460;O75122 CLASP1;CLASP2 CLIP-associating protein 1;CLIP-associating protein 2 no no 0 0 0 By MS/MS 2 0 1 1 90.556 85.66 1 0.034744 106535 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 132.01 18.933 24610000 0 24610000 0 0 0 0 0 0 0 0 0 0 0 0 0 30553 3094;456 27929 256565 203750 203750 0 LLNNHHDDASK Unmodified 1262.6004 0.60036255 2123 Q06190 PPP2R3A Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 7.2727 4.4064 3 0.012892 7733 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.568 37.355 16173000 12431000 0 3742200 0 0 0 0 0 0 0 0 0 0 0 0 30554 2123 27930 256566;256567 203751 203751 1 LLNNSDER Unmodified 959.46722 0.46722311 2688 Q4LE39 ARID4B AT-rich interactive domain-containing protein 4B yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 2 1 1 1 1 1 1 13.071 13.198 2 0.011906 12654 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 75.854 55.334 43161000 0 0 0 3212500 3278400 2844600 4306700 4797000 2322000 3497000 0 8219900 3733300 3240700 3709100 30555 2688 27931 256568;256569;256570;256571;256572;256573;256574;256575;256576;256577;256578;256579 203752;203753;203754;203755;203756;203757;203758;203759 203757 8 LLNNWLTYSK Unmodified 1250.6659 0.66592292 3955 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes yes 0 0 0 By MS/MS 10 0 1 1 78.797 78.961 2 0.036029 91110 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 56.258 15.271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30556 3955 27932 256580 203760 203760 1 LLNPDDLR Unmodified 954.51345 0.51344502 3197 Q86XL3 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 17.094 17.228 2 0.04959 17564 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 47.067 9.5086 72800000 0 0 0 6829400 0 10507000 0 22528000 0 10532000 0 22403000 0 0 0 30557 3197 27933 256581;256582;256583;256584;256585 203761 203761 1 LLNPSLQK Unmodified 911.54402 0.54401687 4491 Q9HAV4 XPO5 Exportin-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 4 2 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 40.878 39.265 2 0.0054639 52665 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 143 67.694 1730400000 568370000 703670000 22543000 22483000 23496000 54126000 33479000 20423000 23417000 47394000 35435000 45575000 33507000 37932000 58591000 30558 4491 27934 256586;256587;256588;256589;256590;256591;256592;256593;256594;256595;256596;256597;256598;256599;256600;256601;256602;256603 203762;203763;203764;203765;203766;203767;203768;203769;203770 203768 6 LLNPTTADLR Unmodified 1112.619 0.61897272 3392 Q8NBF6 AVL9 Late secretory pathway protein AVL9 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.938 56.063 2 0.0045025 63691 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 72.607 39.168 59998000 0 0 0 3876400 3788700 4797600 4259500 3424200 2618200 7104800 5988400 7302800 4156900 4507100 8173900 30559 3392 27935 256604;256605;256606;256607;256608;256609;256610;256611;256612;256613;256614;256615 203771;203772;203773;203774;203775;203776;203777;203778;203779;203780;203781;203782 203774 12 LLNQLQYCEEAGIPLVAIIGEQELK Unmodified 2840.4994 0.49938144 961 P12081 HARS Histidine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 100.23 96.662 3 1.164E-18 119016 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.376 80.168 30550000 0 29059000 1491300 0 0 0 0 0 0 0 0 0 0 0 0 30560 961 27936 256616;256617 203783 203783 1 LLNQPNQWPLVK Unmodified 1448.814 0.81398414 1010 P14923 JUP Junction plakoglobin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.792 78.85 2 1.0597E-10 91401 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 146.81 112.56 493230000 0 0 0 78370000 22576000 30915000 16896000 153910000 19972000 23081000 27083000 37467000 43437000 16568000 22961000 30561 1010 27937 256618;256619;256620;256621;256622;256623;256624;256625;256626;256627;256628;256629 203784;203785;203786;203787;203788;203789;203790;203791;203792;203793;203794;203795;203796;203797 203796 14 LLNSDLGELINK Unmodified 1327.7347 0.73473076 2114 Q05397 PTK2 Focal adhesion kinase 1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 80.464 79.729 2 0.0010315 100661 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.79 57.904 92409000 7393600 0 0 0 4905000 7843300 6133100 0 6386900 12734000 11075000 0 8337800 7943900 19656000 30562 2114 27938 256630;256631;256632;256633;256634;256635;256636;256637;256638;256639 203798;203799;203800 203800 1 LLNSSNIAEHPGFMK Oxidation (M) 1672.8243 0.82429083 4467 Q9H9A5 CNOT10 CCR4-NOT transcription complex subunit 10 yes yes 0 1 0 By MS/MS By MS/MS 2 0 3 2 1 59.61 53.57 2;3 0.0014007 72686 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.82 42.179 30753000 26108000 0 4644700 0 0 0 0 0 0 0 0 0 0 0 0 30563 4467 27939 256640;256641;256642 203801;203802 203801 5901 1 LLNSSNIAEHPGFMK Unmodified 1656.8294 0.8293762 4467 Q9H9A5 CNOT10 CCR4-NOT transcription complex subunit 10 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 63.602 63.009 3 7.2915E-08 86348 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.17 82.294 125390000 34676000 0 0 0 3201700 7888300 3056400 8341700 4074900 9877500 9703700 11953000 0 10922000 21696000 30564 4467 27939 256643;256644;256645;256646;256647;256648;256649;256650;256651;256652;256653 203803;203804;203805 203803 2 LLNTFLER Unmodified 1004.5655 0.56548059 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 71.144 71.264 2 0.0066594 82000 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 98.997 29.564 295500000 0 0 0 19361000 0 27575000 19652000 23249000 16255000 26339000 27246000 36272000 26250000 23357000 49948000 30565 2392 27940 256654;256655;256656;256657;256658;256659;256660;256661;256662;256663;256664 203806;203807;203808;203809;203810;203811;203812;203813;203814;203815;203816 203806 11 LLNTVEETTK Unmodified 1146.6132 0.61321864 1695 P52732 KIF11 Kinesin-like protein KIF11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 36.538 35.802 2 9.2246E-06 45915 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 151.44 105.31 702320000 0 511270000 2303800 8916700 9845600 17113000 13658000 11122000 10077000 15805000 17446000 23893000 18038000 18328000 24509000 30566 1695 27941 256665;256666;256667;256668;256669;256670;256671;256672;256673;256674;256675;256676;256677;256678;256679 203817;203818;203819;203820;203821;203822;203823;203824;203825;203826;203827;203828;203829 203820 13 LLNTWTNRYPDAK Unmodified 1590.8154 0.8154407 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 55.869 55.856 3 0.00081049 62714 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 49.333 27.784 46335000 0 0 0 3779900 2751600 4352900 2830900 3167800 3114300 4168500 0 0 8189900 13980000 0 30567 1986 27942 256680;256681;256682;256683;256684;256685;256686;256687;256688 203830;203831;203832;203833;203834;203835 203833 6 LLNVGFQEALK Unmodified 1230.6972 0.69722304 1015 P15291 B4GALT1 Beta-1,4-galactosyltransferase 1;Lactose synthase A protein;N-acetyllactosamine synthase;Beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase;Beta-N-acetylglucosaminyl-glycolipid beta-1,4-galactosyltransferase;Processed beta-1,4-galactosyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 7.42 3.66 3 1 8 1 2 1 1 1 1 1 1 1 1 1 79.961 78.482 2 4.7077E-07 99619 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 125.48 74.602 134040000 51347000 46688000 4072100 0 4436900 0 3096200 3744800 2442400 6288200 3187800 0 0 2967300 5767900 30568 1015 27943 256689;256690;256691;256692;256693;256694;256695;256696;256697;256698;256699;256700 203836;203837;203838;203839;203840;203841 203839 6 LLNYAPLEK Unmodified 1059.5964 0.59644637 1922 P62875 POLR2L DNA-directed RNA polymerases I, II, and III subunit RPABC5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 63.552 62.214 2 0.005086 80382 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 111.74 66.658 807740000 108150000 374430000 19513000 17150000 17425000 22310000 20717000 16409000 16562000 27623000 30092000 31127000 33103000 22628000 50498000 30569 1922 27944 256701;256702;256703;256704;256705;256706;256707;256708;256709;256710;256711;256712;256713;256714;256715;256716 203842;203843;203844;203845;203846;203847;203848;203849;203850;203851;203852;203853;203854;203855 203845 11 LLPAELPAK Unmodified 950.58007 0.58006802 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.136 58.251 2 0.011979 66048 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 61.999 46.56 1078900000 0 0 0 49176000 46352000 86494000 60077000 58803000 42565000 92587000 97657000 145670000 109960000 106590000 182970000 30570 1986 27945 256717;256718;256719;256720;256721;256722;256723;256724;256725;256726;256727;256728 203856;203857;203858 203857 3 LLPALAAR Unmodified 823.52797 0.52797287 3204 Q86Y56 DNAAF5 Dynein assembly factor 5, axonemal yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 57.084 57.205 2 0.0074285 65070 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 89.673 32.21 360800000 0 0 0 23469000 21048000 33935000 25687000 23045000 23799000 32648000 35594000 45991000 24248000 24936000 46399000 30571 3204 27946 256729;256730;256731;256732;256733;256734;256735;256736;256737;256738;256739;256740 203859;203860;203861;203862;203863;203864;203865;203866;203867;203868;203869 203868 11 LLPALQSTITR Unmodified 1211.7238 0.72377215 1477 P43353 ALDH3B1 Aldehyde dehydrogenase family 3 member B1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 73.961 73.994 2 0.0070295 84682 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.064 34.162 52998000 0 0 0 3598100 3414000 5875900 3740300 4424400 4756500 5382500 6274500 0 6520200 0 9011100 30572 1477 27947 256741;256742;256743;256744;256745;256746;256747;256748;256749;256750 203870;203871;203872;203873;203874;203875;203876 203872 7 LLPAPSFSLDDMDVDK Oxidation (M) 1777.8444 0.84441715 2819 Q5VV41 ARHGEF16 Rho guanine nucleotide exchange factor 16 yes yes 0 1 0 By MS/MS By matching By matching 10 0 3 1 1 1 82.206 82.34 2 0.0031456 95281 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 42.809 36.15 11454000 0 0 0 0 0 3227100 0 0 2144200 0 0 0 0 0 6082600 30573 2819 27948 256751;256752;256753 203877 203877 4458 1 LLPAQLPAEK Unmodified 1078.6386 0.63864553 2617 Q16610 ECM1 Extracellular matrix protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 58.697 58.563 2 0.02179 67513 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 46.462 13.621 13917000 0 0 0 6932600 0 0 2188800 4796000 0 0 0 0 0 0 0 30574 2617 27949 256754;256755;256756 203878;203879 203879 2 LLPARPSLSAR Unmodified 1179.7088 0.70879078 3352 Q8N5S9 CAMKK1 Calcium/calmodulin-dependent protein kinase kinase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 45.909 46.259 3 0.020223 50795 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.783 28.778 40533000 0 0 0 0 0 4261700 4582800 0 0 4414000 5925000 7182100 0 6003900 8163500 30575 3352 27950 256757;256758;256759;256760;256761;256762;256763 203880;203881 203881 2 LLPAWIR Unmodified 867.53306 0.53305825 2823 Q5VW36 FOCAD Focadhesin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 7 1 1 1 1 1 1 1 78.005 78.08 2 0.038665 90215 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 69.39 44.391 21692000 0 0 0 0 2435400 4918000 3027400 3033400 2494200 3001300 2782800 0 0 0 0 30576 2823 27951 256764;256765;256766;256767;256768;256769;256770 203882 203882 1 LLPDDPYEK Unmodified 1088.539 0.53899107 1984 P78417 GSTO1 Glutathione S-transferase omega-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 50.499 48.97 2 0.0073052 62500 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.302 66.778 2627400000 97137000 2317600000 0 15395000 0 0 0 6583400 0 0 32663000 24781000 0 37623000 95629000 30577 1984 27952 256771;256772;256773;256774;256775;256776;256777;256778 203883;203884;203885;203886;203887;203888;203889 203884 6 LLPDGAADGSFYLHSPEGPSK Unmodified 2157.0378 0.037848654 4801 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 74.677 74.841 3 0.0053435 85901 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 29.842 20.678 53589000 0 0 0 0 0 6080500 0 4005300 0 7620800 7913100 5509900 4674500 6254800 11530000 30578 4801 27953 256779;256780;256781;256782;256783;256784;256785;256786 203890 203890 1 LLPDMLR Oxidation (M) 872.47897 0.47897377 4296;2550 Q15583;Q9GZN2 TGIF1;TGIF2 Homeobox protein TGIF1;Homeobox protein TGIF2 no no 0 1 0 By matching By MS/MS 10 0 2 1 1 50.292 50.057 2 0.041179 56544 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 53.554 17.369 7877200 0 0 0 0 4028200 0 3849000 0 0 0 0 0 0 0 0 30579 2550;4296 27954 256787;256788 203891 203891 1 LLPDTILEK Unmodified 1040.6118 0.61176208 5021 Q9UMY1 NOL7 Nucleolar protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72.611 72.127 2 0.005086 90473 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 111.74 39.601 788390000 0 274410000 4827900 35045000 37369000 40335000 39301000 31865000 35079000 47214000 51145000 53001000 41791000 34917000 62096000 30580 5021 27955 256789;256790;256791;256792;256793;256794;256795;256796;256797;256798;256799;256800;256801;256802 203892;203893;203894;203895;203896;203897;203898;203899;203900;203901;203902;203903;203904 203895 13 LLPDTINSINLDR Unmodified 1482.8042 0.80420731 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.469 79.528 2 4.4861E-08 91741 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 104.22 71.901 201160000 0 0 0 7589600 12930000 14677000 10039000 19626000 8854100 23334000 20380000 23197000 17678000 17333000 25524000 30581 2361 27956 256803;256804;256805;256806;256807;256808;256809;256810;256811;256812;256813;256814 203905;203906;203907;203908;203909;203910;203911;203912;203913;203914;203915;203916 203907 12 LLPEHAQTLEK Unmodified 1277.698 0.69795133 1167 P23610 F8A1 Factor VIII intron 22 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 36.621 35.877 3 0.0005446 45758 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 113.63 80.404 288500000 0 107020000 81001000 6447200 5058300 9223900 8947700 7322800 5871600 9096600 7499900 10903000 9044400 9115100 11950000 30582 1167 27957 256815;256816;256817;256818;256819;256820;256821;256822;256823;256824;256825;256826;256827;256828;256829 203917;203918;203919;203920;203921;203922;203923;203924;203925 203923 8 LLPELLQPYTER Unmodified 1470.8082 0.80823006 2230 Q13057 COASY Bifunctional coenzyme A synthase;Phosphopantetheine adenylyltransferase;Dephospho-CoA kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 85.109 85.216 2 2.6895E-05 98749 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 113.93 93.597 144020000 0 0 0 0 8087000 13238000 8485900 10401000 7854800 17528000 12097000 16389000 6106500 12880000 30956000 30583 2230 27958 256830;256831;256832;256833;256834;256835;256836;256837;256838;256839;256840;256841 203926;203927;203928;203929;203930;203931;203932;203933;203934;203935;203936;203937;203938;203939;203940 203933 15 LLPEQLIK Unmodified 952.59572 0.59571809 3643 Q92621 NUP205 Nuclear pore complex protein Nup205 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.035 72.106 2 0.022664 81926 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 60.972 23.813 101780000 0 0 0 5650400 6178800 10504000 6186100 9270000 4797600 9174800 8514200 9276600 8841200 9115100 14268000 30584 3643 27959 256842;256843;256844;256845;256846;256847;256848;256849;256850;256851;256852;256853 203941;203942;203943;203944;203945;203946 203944 6 LLPERQTDVTGEEELTK Unmodified 1957.0004 0.0004005156 2427 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 0 0 1 By matching By MS/MS By MS/MS 2 0 3 1 1 1 57.907 51.929 3 0.00050408 67501 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 61.815 47.343 75580000 14629000 42063000 18889000 0 0 0 0 0 0 0 0 0 0 0 0 30585 2427 27960 256854;256855;256856 203947;203948 203947 2 LLPEVNSEAIDFLEK Unmodified 1715.8982 0.89816728 1296 P31152 MAPK4 Mitogen-activated protein kinase 4 yes yes 0 0 0 By MS/MS 2 0 1 1 95.241 90.377 2 0.0008921 112082 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.56 92.426 18583000 0 18583000 0 0 0 0 0 0 0 0 0 0 0 0 0 30586 1296 27961 256857 203949 203949 1 LLPEYPGVLSDVQEEK Unmodified 1814.9302 0.93019569 722 P00374 DHFR Dihydrofolate reductase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 3.5 2.93 4 1 1 3 2 1 84.507 81.595 2;3 1.1473E-15 94518 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 104.17 86.402 2534400000 0 2467100000 21187000 0 0 0 0 0 0 0 0 0 0 0 46090000 30587 722 27962 256858;256859;256860;256861;256862;256863 203950;203951;203952;203953;203954 203952 5 LLPEYRDAEIVR Unmodified 1472.7987 0.798728 4493 Q9HB07 C12orf10 UPF0160 protein MYG1, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 61.031 61.436 3 0.033785 69465 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.616 26.203 33016000 0 0 0 0 0 0 0 0 0 0 5546100 7672800 0 3882800 15914000 30588 4493 27963 256864;256865;256866;256867 203955 203955 0 LLPFLAPGAR Unmodified 1053.6335 0.63350057 4154 Q9BTY7 HGH1 Protein HGH1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.958 83.022 2 0.0028858 96025 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 79.116 40.324 288130000 0 0 0 11274000 12787000 33778000 16005000 16677000 14468000 25961000 22923000 28490000 23106000 23134000 59523000 30589 4154 27964 256868;256869;256870;256871;256872;256873;256874;256875;256876;256877;256878;256879 203956;203957;203958;203959;203960;203961;203962;203963;203964;203965;203966;203967 203957 12 LLPGAPQQPPK Unmodified 1144.6604 0.66044361 246 O15056 SYNJ2 Synaptojanin-2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 44.2 44.075 2 0.012409 48398 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 47.574 19.4 13072000 0 0 0 0 4018600 0 0 0 0 0 0 0 0 9052900 0 30590 246 27965 256880;256881 203968;203969 203968 2 LLPGDIHQIRK Unmodified 1288.7616 0.76155464 2386 Q14185 DOCK1 Dedicator of cytokinesis protein 1 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 41.969 42.252 3 0.031599 45971 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 22.479 6.8921 22369000 0 0 0 0 0 3457900 0 0 2251400 5623500 0 0 2957500 2277000 5801700 30591 2386 27966 256882;256883;256884;256885;256886;256887 203970 203970 1 LLPGDLTQVQK Unmodified 1210.6921 0.69213767 4433 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 63.953 63.282 2 0.00092165 80049 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.71 76.939 254400000 0 156260000 2262600 6784900 6800800 8735900 8616000 0 4882300 10557000 7995900 14209000 8377800 8156000 10769000 30592 4433 27967 256888;256889;256890;256891;256892;256893;256894;256895;256896;256897;256898;256899;256900 203971;203972 203971 1 LLPGIEVLWTGPK Unmodified 1421.8282 0.82823722 405 O60502 MGEA5 Protein O-GlcNAcase yes yes 0 0 0 By MS/MS 2 0 1 1 98.581 90.45 2 0.004346 116717 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.346 42.457 6508200 6508200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30593 405 27968 256901 203973 203973 1 LLPGLEADSK Unmodified 1041.5706 0.57062555 3204 Q86Y56 DNAAF5 Dynein assembly factor 5, axonemal yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 53.587 53.734 2 0.0067887 60092 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.04 37.438 164540000 0 0 0 6632200 13953000 20813000 0 7378800 15879000 16874000 12524000 29104000 14134000 14149000 13099000 30594 3204 27969 256902;256903;256904;256905;256906;256907;256908;256909;256910;256911;256912 203974;203975;203976;203977;203978;203979 203977 6 LLPGLEADSKPGR Unmodified 1351.746 0.74596415 3204 Q86Y56 DNAAF5 Dynein assembly factor 5, axonemal yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.402 49.561 3 0.00042915 55296 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 70.622 55.935 472100000 0 0 0 35274000 30618000 32516000 40575000 25952000 32347000 32521000 39577000 72678000 28972000 45151000 55914000 30595 3204 27970 256913;256914;256915;256916;256917;256918;256919;256920;256921;256922;256923;256924 203980;203981;203982;203983;203984;203985 203985 4 LLPGNDVEIKK Unmodified 1224.7078 0.70778773 2977 Q6UVJ0 SASS6 Spindle assembly abnormal protein 6 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 42.579 42.772 3 0.0096987 47849 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 28.384 20.928 89529000 0 0 0 6600200 8232000 0 10652000 11095000 0 6273500 10965000 8722500 8876500 8885800 9227000 30596 2977 27971 256925;256926;256927;256928;256929;256930;256931;256932;256933;256934 203986;203987;203988;203989;203990;203991;203992 203991 7 LLPGVQYVYR Unmodified 1206.6761 0.67609367 3003 Q6ZNF0 PAPL Iron/zinc purple acid phosphatase-like protein yes yes 0 0 0 By MS/MS 10 0 1 1 76.457 75.962 2 0.024295 88126 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 58.782 45.955 4879000 0 0 0 4879000 0 0 0 0 0 0 0 0 0 0 0 30597 3003 27972 256935 203993 203993 1 LLPHQLYGVVPQA Unmodified 1433.8031 0.8030851 1082 P18887 XRCC1 DNA repair protein XRCC1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS 7.33 3.77 3 6 1 1 1 1 1 1 1 1 1 81.263 79.398 2 0.0027811 100487 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.221 54.371 129540000 53159000 54564000 9319500 0 2115200 0 1943200 2343100 2047000 0 4045900 0 0 0 0 30598 1082 27973 256936;256937;256938;256939;256940;256941;256942;256943;256944 203994;203995;203996;203997;203998 203996 5 LLPIDGANDLFFQPPPLTPTSK Unmodified 2380.2678 0.26784859 405 O60502 MGEA5 Protein O-GlcNAcase yes yes 0 0 0 By MS/MS 10 0 1 1 96.774 96.937 3 0.016377 112458 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 23.296 15.85 4078500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4078500 30599 405 27974 256945 203999 203999 1 LLPLDTYVESPAAVMELVPSDK Unmodified 2386.2342 0.2341652 15 A2VDF0 FUOM Fucose mutarotase yes yes 0 0 0 By MS/MS 2 0 1 1 99.802 95.089 2 0.0022513 117568 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.605 54.202 25259000 0 25259000 0 0 0 0 0 0 0 0 0 0 0 0 0 30600 15 27975 256946 204000 204000 1 LLPLEEHYR Unmodified 1168.6241 0.6240581 4777;4403 Q9NZN4;Q9H4M9 EHD2;EHD1 EH domain-containing protein 2;EH domain-containing protein 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 2 2 1 2 2 1 1 1 2 2 1 52.567 52.652 2;3 1.2366E-05 59342 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 122.52 106.89 598550000 0 0 0 39174000 22261000 59374000 40594000 40113000 32191000 74897000 52536000 98758000 0 56974000 81681000 30601 4777;4403 27976 256947;256948;256949;256950;256951;256952;256953;256954;256955;256956;256957;256958;256959;256960;256961;256962;256963 204001;204002;204003;204004;204005;204006;204007;204008;204009;204010;204011;204012 204001 10 LLPLGATDTAVFDVR Unmodified 1586.8668 0.86680757 3826 Q96EY5 MVB12A Multivesicular body subunit 12A yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 88.051 88.216 2 0.00053599 102028 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.498 52.037 15295000 0 0 0 0 0 0 0 2018600 0 5207900 3706900 0 0 0 4361300 30602 3826 27977 256964;256965;256966;256967 204013;204014;204015 204014 3 LLPLHFAVDPGK Unmodified 1305.7445 0.74450759 2879 Q6GQQ9;Q8TE49 OTUD7B;OTUD7A OTU domain-containing protein 7B;OTU domain-containing protein 7A yes no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 79.496 78.914 3 0.001094 90803 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.563 60.067 98562000 16872000 0 0 0 2321900 8888500 3712400 6718400 7742200 9123200 7006000 7427600 4570800 5430700 18749000 30603 2879 27978 256968;256969;256970;256971;256972;256973;256974;256975;256976;256977;256978;256979 204016;204017;204018;204019;204020 204018 5 LLPLNDCR Unmodified 999.51715 0.51715019 5088 Q9Y281 CFL2 Cofilin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 47.446 47.676 2 0.016586 52342 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.032 19.965 100180000 0 0 0 0 2206200 6545300 3175100 0 3605300 3339500 20484000 11997000 0 14929000 33898000 30604 5088 27979 256980;256981;256982;256983;256984;256985;256986;256987;256988 204021;204022 204021 2 LLPLNDCRYALYDATYETK Unmodified 2318.1253 0.12528345 5088 Q9Y281 CFL2 Cofilin-2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 4 1 2 1 84.387 79.27 3 7.7128E-06 96958 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 75.97 49.496 58630000 35006000 18171000 5453000 0 0 0 0 0 0 0 0 0 0 0 0 30605 5088 27980 256989;256990;256991;256992 204023;204024;204025;204026;204027;204028 204028 6 LLPLSVTPEAFSGTVIEK Unmodified 1900.0557 0.05573055 582 O94763 URI1 Unconventional prefoldin RPB5 interactor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 2 92.224 91.756 2 1.3209E-05 113812 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.747 82.067 90494000 0 61469000 1293700 0 1027000 1072300 929940 1503700 1505700 4200700 2701300 2555300 0 1570800 10664000 30606 582 27981 256993;256994;256995;256996;256997;256998;256999;257000;257001;257002;257003;257004;257005 204029;204030 204029 2 LLPLTQYPDSSVR Unmodified 1487.7984 0.79839365 4154 Q9BTY7 HGH1 Protein HGH1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.877 73.941 2 0.00087924 85063 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 69.979 42.864 342950000 0 0 0 17823000 18979000 40904000 21977000 20679000 16763000 34943000 30393000 40168000 24915000 29454000 45950000 30607 4154 27982 257006;257007;257008;257009;257010;257011;257012;257013;257014;257015;257016;257017 204031;204032;204033;204034;204035;204036;204037;204038;204039;204040;204041;204042;204043;204044 204040 14 LLPPFKPQVTSEVDTR Unmodified 1825.9938 0.993799 1305 P31751 AKT2 RAC-beta serine/threonine-protein kinase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 72.732 72.909 3 0.011241 83931 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 30.536 21.534 44061000 0 0 0 0 0 5877400 4170300 0 0 6006600 6456400 6226800 5339800 0 9983800 30608 1305 27983 257018;257019;257020;257021;257022;257023;257024 204045;204046;204047 204046 3 LLPPSEK Unmodified 782.4538 0.45380487 2645 Q1KMD3 HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.43 2.06 1 13 1 1 1 1 2 1 2 1 1 1 1 1 24.283 24.138 2 0.023725 25183 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 84.244 56.539 306130000 0 69563000 0 17591000 16959000 16950000 19290000 2500300 14308000 25086000 25756000 34409000 31491000 0 32226000 30609 2645 27984 257025;257026;257027;257028;257029;257030;257031;257032;257033;257034;257035;257036;257037;257038 204048;204049;204050;204051;204052;204053;204054;204055;204056;204057;204058 204057 11 LLPPTFPR Unmodified 939.55419 0.55418762 2831 Q5VZE5 NAA35 N-alpha-acetyltransferase 35, NatC auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 68.821 68.819 2 0.0045204 78774 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 110.36 66.247 210660000 0 0 0 6237100 10362000 10169000 4032200 0 0 39320000 53459000 86185000 0 893380 0 30610 2831 27985 257039;257040;257041;257042;257043;257044;257045;257046 204059;204060;204061;204062 204062 3 LLPPYLR Unmodified 870.53272 0.5327239 1481 P43490 NAMPT Nicotinamide phosphoribosyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.056 67.14 2 0.024225 76781 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 83.229 72.114 126440000 0 0 0 5630600 4120700 8238000 7275400 7551100 4231700 9167800 14433000 14642000 7259400 10213000 33682000 30611 1481 27986 257047;257048;257049;257050;257051;257052;257053;257054;257055;257056;257057;257058 204063;204064;204065;204066 204064 4 LLPQAEMFEHLSGK Unmodified 1598.8127 0.81266351 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 86.774 80.305 3 0.0004689 101829 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.373 58.899 62956000 33461000 29495000 0 0 0 0 0 0 0 0 0 0 0 0 0 30612 5049 27987 257059;257060 204067;204068 204067 2 LLPQLTYLDGYDR Unmodified 1565.809 0.80895834 1404;3651 P39687;Q92688 ANP32A;ANP32B Acidic leucine-rich nuclear phosphoprotein 32 family member A;Acidic leucine-rich nuclear phosphoprotein 32 family member B no no 0 0 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 85.869 85.976 2 2.847E-08 99359 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.24 62.107 73930000 0 0 0 0 3070400 1973000 3095300 5931400 4707900 6846200 9895300 8586300 4181400 4926800 20716000 30613 1404;3651 27988 257061;257062;257063;257064;257065;257066;257067;257068;257069;257070;257071 204069;204070;204071;204072;204073;204074;204075;204076 204070 8 LLPQLTYLDGYDRDDK Unmodified 1923.9578 0.95780742 1404 P39687 ANP32A Acidic leucine-rich nuclear phosphoprotein 32 family member A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.69 3.6 8 3 5 5 4 2 1 1 1 1 1 83.952 80.443 2;3;4 9.5818E-30 103579 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 139.76 99.033 898000000 407220000 286430000 33121000 0 0 0 0 9619700 9021300 0 17653000 19172000 0 0 115760000 30614 1404 27989 257072;257073;257074;257075;257076;257077;257078;257079;257080;257081;257082;257083;257084;257085;257086;257087 204077;204078;204079;204080;204081;204082;204083;204084;204085;204086;204087;204088;204089;204090;204091;204092;204093;204094;204095;204096;204097 204092 19 LLPQTTPENVSK Unmodified 1325.7191 0.7190807 3065 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.352 43.527 2 0.0052433 49280 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 81.338 68.81 166430000 0 0 0 9184000 9011000 9252400 10501000 12244000 10248000 13635000 14288000 27100000 15342000 10823000 24799000 30615 3065 27990 257088;257089;257090;257091;257092;257093;257094;257095;257096;257097;257098;257099 204098;204099;204100 204100 0 LLPSALGVK Unmodified 896.5695 0.56950333 2201 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.275 62.372 2 0.029484 71309 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 48.561 28.006 186620000 0 0 0 14474000 11500000 17164000 14759000 11344000 8418000 17463000 19352000 19414000 16271000 15415000 21045000 30616 2201 27991 257100;257101;257102;257103;257104;257105;257106;257107;257108;257109;257110;257111 204101;204102 204101 2 LLPSAPQTLPDGPLASPAR Unmodified 1900.0418 0.04181182 242 O15027 SEC16A Protein transport protein Sec16A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 80.195 80.254 2;3 8.1899E-24 92812 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 125.73 104.1 503510000 0 0 0 18584000 31957000 42493000 33908000 34430000 34020000 52671000 47202000 63383000 40881000 47282000 56700000 30617 242 27992 257112;257113;257114;257115;257116;257117;257118;257119;257120;257121;257122;257123;257124;257125;257126;257127;257128;257129;257130;257131;257132;257133;257134;257135 204103;204104;204105;204106;204107;204108;204109;204110;204111;204112;204113;204114;204115;204116 204104 13 LLPSLIGR Unmodified 867.55419 0.55418762 571 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 71.6 71.664 2 0.033696 82408 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 53.554 10.554 36537000 0 0 0 2193200 2273300 2467000 1997300 2236200 0 4076300 3493500 4146300 4543000 3628400 5482100 30618 571 27993 257136;257137;257138;257139;257140;257141;257142;257143;257144;257145;257146 204117;204118;204119 204117 3 LLPSPLK Unmodified 766.49528 0.49527576 4662 Q9NV88 INTS9 Integrator complex subunit 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 53.45 53.603 2 0.023373 60472 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 88.643 8.1805 282460000 0 0 0 23148000 0 29295000 37109000 0 28236000 32278000 32793000 36002000 31673000 31925000 0 30619 4662 27994 257147;257148;257149;257150;257151;257152;257153;257154;257155 204120;204121;204122;204123;204124;204125;204126;204127 204126 8 LLPSPVTCTPK Unmodified 1211.6584 0.6583947 4156 Q9BU19 ZNF692 Zinc finger protein 692 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 55.762 55.847 2 0.0082462 63552 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 55.064 42.476 81020000 0 0 0 5158900 5651300 5102700 6571700 5857400 5316100 10176000 9212400 0 9376900 8033600 10563000 30620 4156 27995 257156;257157;257158;257159;257160;257161;257162;257163;257164;257165;257166 204128;204129;204130 204128 3 LLPVLLSTAQEADPEVR Unmodified 1850.0149 0.014928368 3522 Q8TEX9 IPO4 Importin-4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 1 2 2 2 2 2 2 2 2 2 2 2 87.555 87.643 2;3 1.3826E-28 101651 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 136.7 121.07 146100000 0 0 0 1234900 6196300 14050000 5702900 9147600 6283600 21286000 14384000 15288000 5526700 10793000 36212000 30621 3522 27996 257167;257168;257169;257170;257171;257172;257173;257174;257175;257176;257177;257178;257179;257180;257181;257182;257183;257184;257185;257186;257187;257188;257189 204131;204132;204133;204134;204135;204136;204137;204138;204139;204140;204141;204142;204143;204144;204145;204146;204147;204148;204149;204150 204131 19 LLQAETASNSAR Unmodified 1259.647 0.64697839 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 25.145 25.348 2 8.4793E-08 27047 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 125.48 82.234 146950000 0 0 0 8961800 10745000 11379000 14339000 9034900 14142000 10591000 11860000 13593000 9615700 15093000 17599000 30622 2459 27997 257190;257191;257192;257193;257194;257195;257196;257197;257198;257199;257200;257201 204151;204152;204153;204154;204155;204156;204157;204158;204159;204160 204156 7 LLQAFLER Unmodified 988.57057 0.57056597 1754 P55060 CSE1L Exportin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 74.452 74.488 2 0.0044283 85059 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 145.63 77.212 230580000 0 0 0 8435100 9833300 34738000 15053000 12423000 0 32668000 0 19341000 13218000 19590000 65283000 30623 1754 27998 257202;257203;257204;257205;257206;257207;257208;257209;257210;257211 204161;204162;204163;204164;204165;204166;204167;204168;204169;204170;204171;204172 204166 11 LLQALHIDGPR Unmodified 1231.7037 0.70370541 4641 Q9NU22 MDN1 Midasin yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 63.656 63.958 3 0.010497 72297 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.653 37.848 7883100 0 0 0 0 0 0 0 2286200 0 0 0 0 2370300 0 3226600 30624 4641 27999 257212;257213;257214 204173 204173 1 LLQAMEPVHVAR Unmodified 1362.7442 0.74419001 2602 Q16401 PSMD5 26S proteasome non-ATPase regulatory subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 57.131 57.46 3 0.001704 65206 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 49.448 38.235 89106000 0 0 0 0 0 7560800 0 0 0 15836000 16842000 13060000 0 7483700 28323000 30625 2602 28000 257215;257216;257217;257218;257219;257220 204174;204175;204176 204175 3 LLQAMEPVHVAR Oxidation (M) 1378.7391 0.73910463 2602 Q16401 PSMD5 26S proteasome non-ATPase regulatory subunit 5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 43.649 43.904 3 0.0010455 49362 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 74.76 52.714 98351000 0 0 0 0 0 17898000 19799000 12763000 0 0 0 0 0 15613000 32278000 30626 2602 28000 257221;257222;257223;257224;257225 204177;204178;204179;204180 204177 4239 3 LLQAQGVEVPSK Unmodified 1267.7136 0.71360139 437 O60841 EIF5B Eukaryotic translation initiation factor 5B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 53.51 52.105 2 2.6492E-08 58862 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 132.78 89.533 1641000000 22575000 856310000 0 35418000 31767000 71563000 51236000 36816000 45348000 82750000 86855000 92148000 76462000 53864000 97918000 30627 437 28001 257226;257227;257228;257229;257230;257231;257232;257233;257234;257235;257236;257237;257238;257239;257240;257241 204181;204182;204183;204184;204185;204186;204187;204188;204189;204190;204191;204192;204193;204194 204188 13 LLQASFK Unmodified 805.46979 0.46978929 2549 Q15555 MAPRE2 Microtubule-associated protein RP/EB family member 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 48.976 43.156 2 0.032088 59341 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.866 10.02 149800000 69541000 70256000 10007000 0 0 0 0 0 0 0 0 0 0 0 0 30628 2549 28002 257242;257243;257244 204195 204195 1 LLQDAIR Unmodified 827.4865 0.48650199 3693 Q92974 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.53 40.708 2 0.023335 44209 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 90.706 9.325 523270000 0 0 0 26249000 29608000 39549000 45499000 31012000 29132000 44820000 58581000 56600000 56336000 44607000 61273000 30629 3693 28003 257245;257246;257247;257248;257249;257250;257251;257252;257253;257254;257255;257256 204196;204197;204198;204199;204200 204199 4 LLQDANYNVEK Unmodified 1305.6565 0.65648044 573 O76031 CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 43.628 43.756 2 0.00073559 47936 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.108 46.862 98522000 0 0 0 6530200 5347700 0 8839800 9079100 6595300 14646000 12848000 0 11619000 11166000 11849000 30630 573 28004 257257;257258;257259;257260;257261;257262;257263;257264;257265;257266 204201;204202;204203;204204;204205;204206;204207;204208;204209;204210;204211 204203 11 LLQDFFNGK Unmodified 1080.5604 0.56039521 934;1743;1047 P11142;P17066;P54652 HSPA8;HSPA6;HSPA2 Heat shock cognate 71 kDa protein;Heat shock 70 kDa protein 6;Heat shock-related 70 kDa protein 2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.16 3.73 5 2 12 3 3 1 1 1 1 1 1 1 1 1 1 1 1 1 77.185 76.445 2 3.9E-14 87462 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 170.32 112.76 7602400000 27193000 3436500000 0 121190000 117720000 220460000 169090000 247320000 179110000 260740000 468280000 463440000 245050000 414230000 1232100000 30631 934;1047;1743 28005 257267;257268;257269;257270;257271;257272;257273;257274;257275;257276;257277;257278;257279;257280;257281;257282;257283;257284;257285 204212;204213;204214;204215;204216;204217;204218;204219;204220;204221;204222;204223;204224;204225;204226;204227;204228;204229;204230;204231;204232;204233;204234;204235;204236;204237;204238;204239 204220 28 LLQDFFNGR Unmodified 1108.5665 0.56654322 908 P0DMV9;P0DMV8 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 2 1 1 1 1 1 1 77.33 77.398 2 2.1359E-05 89502 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 135.84 135.84 1016600000 0 0 0 25582000 24107000 66702000 33989000 44748000 97572000 64844000 91642000 103350000 57600000 100660000 305850000 30632 908 28006 257286;257287;257288;257289;257290;257291;257292;257293;257294;257295;257296;257297;257298 204240;204241;204242;204243;204244;204245;204246;204247;204248;204249 204244 9 LLQDFFNGRDLNK Unmodified 1578.8154 0.8154407 908 P0DMV9;P0DMV8 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 2 1 2 2 1 1 1 2 2 76.801 76.918 2;3 2.7783E-16 88235 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 152.7 131.13 337710000 0 0 0 2809000 0 19181000 6773800 15599000 19329000 0 14670000 25546000 0 29759000 204040000 30633 908 28007 257299;257300;257301;257302;257303;257304;257305;257306;257307;257308;257309;257310;257311;257312;257313 204250;204251;204252;204253;204254;204255;204256;204257;204258;204259;204260;204261;204262 204255 11 LLQDFNR Unmodified 904.47667 0.47666558 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.93 42.107 2 0.020823 47380 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 107.74 40.751 434030000 0 0 0 22269000 23808000 28836000 24778000 32300000 17299000 35721000 41086000 49917000 36298000 48261000 73456000 30634 1986 28008 257314;257315;257316;257317;257318;257319;257320;257321;257322;257323;257324;257325 204263;204264;204265;204266;204267;204268;204269;204270 204263 7 LLQDISEARCK Unmodified 1331.6867 0.68673471 2838 Q63HN8 RNF213 E3 ubiquitin-protein ligase RNF213 yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 44.008 38.209 2;3 0.0022841 52298 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.171 66.397 49081000 45099000 0 3981400 0 0 0 0 0 0 0 0 0 0 0 0 30635 2838 28009 257326;257327;257328 204271;204272 204272 1 LLQDQLR Unmodified 884.50797 0.50796571 2990 Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein yes yes 0 0 0 By MS/MS 10 0 1 1 38.156 37.686 2 0.043924 42104 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 67.035 4.3198 4629100 0 0 0 0 4629100 0 0 0 0 0 0 0 0 0 0 30636 2990 28010 257329 204273 204273 1 LLQDSLGGNAK Unmodified 1114.5982 0.59823728 247 O15066;O14782 KIF3B;KIF3C Kinesin-like protein KIF3B;Kinesin-like protein KIF3B, N-terminally processed;Kinesin-like protein KIF3C yes no 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching 10 0 8 1 1 1 1 1 1 1 1 37.974 38.19 2 0.00042721 41878 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 85.676 39.25 23155000 0 0 0 0 1582000 2511300 2011200 2315600 1319800 0 0 4760700 3801800 0 4852200 30637 247 28011 257330;257331;257332;257333;257334;257335;257336;257337 204274;204275;204276;204277 204276 4 LLQDSSSPVDLAK Unmodified 1371.7246 0.72456001 2551 Q15596 NCOA2 Nuclear receptor coactivator 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.988 60.058 2 0.0003306 68447 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 98.943 38.353 116990000 0 0 0 6009700 9130300 5839700 10237000 10242000 6226300 15387000 12620000 0 11020000 9138800 21139000 30638 2551 28012 257338;257339;257340;257341;257342;257343;257344;257345;257346;257347;257348;257349 204278;204279;204280;204281;204282;204283;204284;204285;204286;204287;204288 204283 11 LLQDVRQDLADVVQVCEGK Unmodified 2184.1209 0.12086678 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 91.202 84.682 3 4.899E-68 107721 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 148.91 132.79 54996000 34283000 20713000 0 0 0 0 0 0 0 0 0 0 0 0 0 30639 2392 28013 257350;257351;257352 204289;204290;204291;204292;204293 204293 5 LLQEAEQRLK Unmodified 1226.6983 0.69828568 4471 Q9H9E3 COG4 Conserved oligomeric Golgi complex subunit 4 yes yes 0 0 1 By MS/MS 2 0 1 1 48.077 42.514 3 0.01771 55278 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 50.452 10.515 24998000 0 24998000 0 0 0 0 0 0 0 0 0 0 0 0 0 30640 4471 28014 257353 204294 204294 1 LLQEDSSPLLR Unmodified 1269.6929 0.69286595 4941 Q9UJV9 DDX41 Probable ATP-dependent RNA helicase DDX41 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 63.717 63.8 2 0.029835 72755 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 49.715 22.412 31177000 0 0 0 1938100 2377400 0 2930200 0 1555900 5374200 2877400 4605900 4467800 0 5050200 30641 4941 28015 257354;257355;257356;257357;257358;257359;257360;257361;257362 204295 204295 1 LLQEENCDIFQNLTK Unmodified 1863.9037 0.90366336 2159 Q08499 PDE4D cAMP-specific 3',5'-cyclic phosphodiesterase 4D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 82.608 81.943 2 9.5499E-27 94516 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 149.26 137.73 249240000 0 179350000 2763200 0 2449500 5160600 1984200 3629700 2922000 6944700 6276000 5689600 3898300 7397100 20770000 30642 2159 28016 257363;257364;257365;257366;257367;257368;257369;257370;257371;257372;257373;257374;257375;257376 204296;204297;204298;204299;204300;204301;204302;204303;204304;204305;204306;204307;204308 204299 13 LLQEFNK Unmodified 890.48617 0.48616764 3912 Q96KQ7 EHMT2 Histone-lysine N-methyltransferase EHMT2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 13 1 1 1 1 2 1 1 1 1 1 1 1 39.842 40.02 2 0.030762 44053 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 74.439 33.753 155610000 0 0 0 11836000 10525000 14111000 9295700 12260000 10042000 15897000 13683000 14914000 14882000 10767000 17395000 30643 3912 28017 257377;257378;257379;257380;257381;257382;257383;257384;257385;257386;257387;257388;257389 204309;204310;204311;204312;204313 204312 5 LLQEGSPSDITTLSVEPDKK Unmodified 2156.1212 0.12124393 2578 Q15788 NCOA1 Nuclear receptor coactivator 1 yes yes 0 0 1 By MS/MS By matching By MS/MS 10 0 3 1 1 1 70.385 70.628 3 0.010482 81185 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 15.006 6.526 11498000 0 0 0 0 0 0 0 0 0 3618600 2483800 5395100 0 0 0 30644 2578 28018 257390;257391;257392 204314;204315 204315 2 LLQEHNNALK Unmodified 1178.6408 0.6407708 3785 Q96CV9 OPTN Optineurin yes yes 0 0 0 By MS/MS 2 0 1 1 29.629 24.009 2 0.027373 33956 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.948 63.389 10491000 10491000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30645 3785 28019 257393 204316 204316 0 LLQELYK Unmodified 905.52222 0.52221879 675 O95628 CNOT4 CCR4-NOT transcription complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.6 3.67 3 7 1 1 1 1 1 1 1 1 1 1 55.164 53.462 2 0.01917 60276 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 110.61 38.591 195940000 10448000 52210000 7434800 7986900 0 0 12168000 0 14728000 20774000 0 0 19385000 17652000 33157000 30646 675 28020 257394;257395;257396;257397;257398;257399;257400;257401;257402;257403 204317;204318;204319;204320;204321;204322;204323;204324;204325;204326;204327;204328 204318 12 LLQFEGR Unmodified 861.47085 0.47085192 2037 Q00536 CDK16 Cyclin-dependent kinase 16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.957 48.119 2 0.035265 54145 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 70.912 16.387 106640000 0 0 0 5785400 5442100 12222000 6594100 7888400 7471000 10408000 11178000 8909000 11798000 8524300 10421000 30647 2037 28021 257404;257405;257406;257407;257408;257409;257410;257411;257412;257413;257414;257415 204329;204330 204329 2 LLQFLAGQQVNPTK Unmodified 1555.8722 0.8722273 445 O60921 HUS1 Checkpoint protein HUS1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 80.635 78.046 2 1.1849E-18 99945 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 125.22 106.47 24678000 7471200 0 0 0 0 0 0 0 0 0 0 0 0 6070700 11136000 30648 445 28022 257416;257417;257418;257419 204331;204332;204333;204334 204332 4 LLQFPELR Unmodified 1014.5862 0.58621603 3915 Q96L91 EP400 E1A-binding protein p400 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 81.163 81.227 2 0.00622 93555 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 102.71 10.807 89708000 0 0 0 3231800 4940900 0 5038900 8175500 6485200 11306000 7161200 12230000 7872300 7217400 16049000 30649 3915 28023 257420;257421;257422;257423;257424;257425;257426;257427;257428;257429;257430 204335;204336;204337;204338;204339;204340;204341;204342;204343;204344;204345 204339 10 LLQGPMDISEK Unmodified 1229.6326 0.63257388 4457 Q9H8Y5 ANKZF1 Ankyrin repeat and zinc finger domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 62.161 61.235 2 0.0015109 69832 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 72.243 49.53 162770000 0 133320000 0 0 0 0 0 0 0 6032600 5257800 0 0 6461600 11703000 30650 4457 28024 257431;257432;257433;257434;257435 204346;204347;204348;204349;204350;204351 204349 5 LLQGPMDISEK Oxidation (M) 1245.6275 0.6274885 4457 Q9H8Y5 ANKZF1 Ankyrin repeat and zinc finger domain-containing protein 1 yes yes 0 1 0 By MS/MS By MS/MS By matching By matching 10 0 4 1 1 1 1 45.94 45.89 2 0.01404 51655 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 42.348 25.579 36754000 0 0 0 4306400 0 0 4337600 0 23810000 4299400 0 0 0 0 0 30651 4457 28024 257436;257437;257438;257439 204352 204352 5895 1 LLQGYHPNDIEK Unmodified 1425.7252 0.72522871 2086 Q03001 DST Dystonin yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 49.488 43.567 3 0.001622 60182 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.632 53.205 22658000 16521000 0 6137200 0 0 0 0 0 0 0 0 0 0 0 0 30652 2086 28025 257440;257441 204353;204354 204353 2 LLQHGINADDK Unmodified 1222.6306 0.63060004 3946 Q96P70 IPO9 Importin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.4 6 2 23 3 3 2 2 2 2 2 2 2 2 2 2 2 2 1 25.038 24.039 2;3 1.7196E-23 32809 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 192.38 165.08 3197900000 2009500000 279380000 546920000 28082000 20682000 59555000 22933000 24321000 13514000 45895000 28583000 36368000 33954000 37075000 11193000 30653 3946 28026 257442;257443;257444;257445;257446;257447;257448;257449;257450;257451;257452;257453;257454;257455;257456;257457;257458;257459;257460;257461;257462;257463;257464;257465;257466;257467;257468;257469;257470;257471;257472 204355;204356;204357;204358;204359;204360;204361;204362;204363;204364;204365;204366;204367;204368;204369;204370;204371;204372;204373;204374;204375;204376;204377;204378;204379;204380;204381;204382;204383 204364 20 LLQHPSICSDPTEEPTALTAGQSTSETQEGGK Unmodified 3368.5678 0.56780795 1462 P42684 ABL2 Abelson tyrosine-protein kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 66.595 66.749 3 1.5404E-47 76562 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 88.395 85.21 109400000 0 0 0 0 6361000 10857000 6874300 8234100 9701500 11895000 13471000 10486000 10283000 8575500 12665000 30654 1462 28027 257473;257474;257475;257476;257477;257478;257479;257480;257481;257482;257483 204384;204385;204386;204387;204388;204389;204390;204391;204392;204393;204394;204395;204396 204385 13 LLQHPSICSDPTEEPTALTAGQSTSETQEGGKK Unmodified 3496.6628 0.66277097 1462 P42684 ABL2 Abelson tyrosine-protein kinase 2 yes yes 0 0 1 By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 61.918 61.964 4 1.2663E-13 71050 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 39.687 37.656 48839000 0 0 0 3707000 4336400 0 3919500 7364200 0 4875700 7649700 0 0 6091800 10895000 30655 1462 28028 257484;257485;257486;257487;257488;257489;257490;257491 204397;204398;204399;204400 204400 4 LLQIIDTTLLK Unmodified 1269.7908 0.79078908 3891 Q96JC1 VPS39 Vam6/Vps39-like protein yes yes 0 0 0 By MS/MS 2 0 1 1 95.934 87.804 2 0.04343 113529 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.04 31.2 6215800 6215800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30656 3891 28029 257492 204401 204401 0 LLQIIER Unmodified 883.5491 0.54910224 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 61.537 61.714 2 0.031655 70578 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 73.616 8.813 90443000 0 0 0 0 4398900 9634000 0 0 4472500 8450200 11123000 13614000 8298000 11052000 19400000 30657 1986 28030 257493;257494;257495;257496;257497;257498;257499;257500;257501 204402;204403;204404;204405;204406;204407;204408;204409 204402 8 LLQISSFNGK Unmodified 1105.6132 0.61315906 3701;164 O00507;Q93008 USP9Y;USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-Y;Probable ubiquitin carboxyl-terminal hydrolase FAF-X no no 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 65.392 65.631 2 0.002556 74341 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.426 47.07 53968000 0 0 0 0 0 5743200 5461900 0 0 6395600 7989600 9257200 5048700 5866600 8204700 30658 164;3701 28031 257502;257503;257504;257505;257506;257507;257508;257509 204410;204411;204412;204413;204414;204415 204412 4 LLQLGQQPR Unmodified 1051.6138 0.61382777 5182 Q9Y446 PKP3 Plakophilin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 47.905 48.241 2 0.0088914 54259 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 68.312 27.626 163480000 0 0 0 0 0 18397000 0 22595000 10538000 17769000 17979000 17982000 21412000 14867000 21947000 30659 5182 28032 257510;257511;257512;257513;257514;257515;257516;257517;257518 204416;204417;204418;204419;204420;204421;204422;204423;204424 204419 1 LLQLILGCAINCEK Unmodified 1643.8739 0.87388356 4937 Q9UJC3 HOOK1 Protein Hook homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 64.518 64.758 2 0.0089989 73822 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 46.462 15.898 42088000 0 0 0 0 0 8786200 0 2869800 6831700 0 0 4858900 4946700 5765100 8029200 30660 4937 28033 257519;257520;257521;257522;257523;257524;257525 204425;204426 204425 2 LLQLLTTK Unmodified 928.59572 0.59571809 2551 Q15596 NCOA2 Nuclear receptor coactivator 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 71.438 70.881 2 0.010113 93379 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 113.5 36.653 101590000 9490700 0 0 5274300 4413700 7924500 7565100 6688900 5354100 9404600 9522700 10510000 8189900 5902300 11345000 30661 2551 28034 257526;257527;257528;257529;257530;257531;257532;257533;257534;257535;257536;257537;257538 204427;204428;204429;204430;204431;204432;204433;204434;204435;204436;204437;204438;204439 204432 13 LLQLQEQMR Oxidation (M) 1173.6176 0.61759251 1029 P15924 DSP Desmoplakin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 43.547 43.72 2 0.0043882 48837 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 74.486 22.622 283990000 0 0 0 0 13931000 17229000 14371000 151470000 12578000 17769000 16305000 32533000 0 7796600 0 30662 1029 28035 257539;257540;257541;257542;257543;257544;257545;257546;257547 204440;204441;204442;204443;204444;204445;204446;204447;204448 204445 1435 9 LLQLQEQMR Unmodified 1157.6227 0.62267789 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 57.946 58.019 2 0.00045813 66275 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 160.75 36.667 233770000 0 0 0 22870000 14968000 13924000 11628000 70946000 9293900 15043000 15657000 23127000 27028000 9289700 0 30663 1029 28035 257548;257549;257550;257551;257552;257553;257554;257555;257556;257557;257558;257559 204449;204450;204451;204452;204453;204454;204455;204456;204457;204458;204459;204460;204461 204458 13 LLQLSCNGNVK Unmodified 1244.6547 0.6547063 5004 Q9ULT8 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 56.203 49.205 2 0.0048049 66694 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.676 39.25 42800000 17665000 25135000 0 0 0 0 0 0 0 0 0 0 0 0 0 30664 5004 28036 257560;257561 204462;204463 204463 2 LLQLTEK Unmodified 843.50657 0.50656873 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 49.353 43.503 2 0.034035 56561 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.359 15.976 1003700000 55387000 908670000 39614000 0 0 0 0 0 0 0 0 0 0 0 0 30665 2047 28037 257562;257563;257564 204464 204464 1 LLQLVEDR Unmodified 984.5604 0.56039521 1062 P17844 DDX5 Probable ATP-dependent RNA helicase DDX5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.493 59.603 2 0.004651 68492 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 109.86 48.901 888960000 0 0 0 47827000 51213000 70165000 66484000 54476000 50554000 83141000 84076000 110740000 81847000 72378000 116060000 30666 1062 28038 257565;257566;257567;257568;257569;257570;257571;257572;257573;257574;257575;257576 204465;204466;204467;204468;204469;204470;204471;204472;204473;204474;204475;204476;204477;204478;204479 204479 14 LLQLVEDRGSGR Unmodified 1341.7365 0.7364621 1062 P17844 DDX5 Probable ATP-dependent RNA helicase DDX5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 49.575 49.783 3 0.004823 56323 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 66.023 34.837 83595000 0 0 0 0 0 10581000 13013000 0 16153000 0 16231000 0 15601000 12017000 0 30667 1062 28039 257577;257578;257579;257580;257581;257582;257583 204480;204481;204482;204483;204484;204485 204481 4 LLQMQPAQHGEIIK Unmodified 1604.8708 0.87084709 128 O00203;Q13367 AP3B1;AP3B2 AP-3 complex subunit beta-1;AP-3 complex subunit beta-2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 4 10 2 1 1 1 1 1 1 1 1 1 1 1 1 59.016 57.201 2;3 3.1869E-11 79221 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 112.64 87.208 677440000 302150000 80604000 56105000 11036000 13255000 24844000 13818000 23807000 13413000 28223000 0 27210000 0 25942000 57028000 30668 128 28040 257584;257585;257586;257587;257588;257589;257590;257591;257592;257593;257594;257595;257596;257597 204486;204487;204488;204489;204490;204491;204492;204493;204494;204495;204496;204497;204498;204499;204500;204501 204494 14 LLQMQPAQHGEIIK Oxidation (M) 1620.8658 0.86576171 128 O00203;Q13367 AP3B1;AP3B2 AP-3 complex subunit beta-1;AP-3 complex subunit beta-2 yes no 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.57 3.96 6 8 2 2 2 1 1 1 1 1 1 1 1 44.002 41.632 2;3 0.00034392 52739 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 75.102 62.719 622970000 198030000 77037000 73023000 0 20965000 37261000 39801000 30399000 0 43317000 35087000 0 0 29131000 38921000 30669 128 28040 257598;257599;257600;257601;257602;257603;257604;257605;257606;257607;257608;257609;257610;257611 204502;204503;204504;204505;204506;204507 204507 168 3 LLQNGNSPAEVAK Unmodified 1339.7096 0.70957864 5292 Q9Y6Q9 NCOA3 Nuclear receptor coactivator 3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 35.816 34.898 2 6.2166E-07 44060 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.4 73.507 117200000 16995000 43757000 0 5021100 2771700 9319900 4409500 3961500 0 0 5685900 7589600 0 7274500 10412000 30670 5292 28041 257612;257613;257614;257615;257616;257617;257618;257619;257620;257621;257622;257623;257624 204508;204509;204510;204511;204512;204513;204514;204515;204516;204517;204518;204519;204520 204511 13 LLQQEEEIK Unmodified 1128.6027 0.60265396 1733 P54136 RARS Arginine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 37.63 36.514 2 0.001723 46475 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 133.58 83.622 1035900000 10739000 292030000 3310300 37453000 35111000 66205000 49966000 47771000 32686000 65649000 68245000 83731000 64710000 67209000 111050000 30671 1733 28042 257625;257626;257627;257628;257629;257630;257631;257632;257633;257634;257635;257636;257637;257638;257639;257640 204521;204522;204523;204524;204525;204526;204527;204528;204529;204530;204531;204532;204533;204534;204535;204536;204537 204524 14 LLQQGLQR Unmodified 954.56106 0.56106391 3016 Q6ZU65 UBN2 Ubinuclein-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 31.446 31.633 2 0.016585 34307 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 67.035 22.314 21251000 0 0 0 0 2776300 0 1777300 2534300 0 2974200 0 4806600 3274600 3107300 0 30672 3016 28043 257641;257642;257643;257644;257645;257646;257647 204538;204539;204540 204540 3 LLQQGTAPAQAK Unmodified 1224.6826 0.68263561 3208 Q86YP4 GATAD2A Transcriptional repressor p66-alpha yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 25.145 25.384 2 2.6916E-05 26968 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 123.35 100.86 194470000 0 0 0 0 13783000 15591000 14496000 13086000 13408000 18281000 12481000 26314000 15246000 13786000 37999000 30673 3208 28044 257648;257649;257650;257651;257652;257653;257654;257655;257656;257657;257658;257659 204541;204542;204543;204544;204545;204546;204547;204548;204549;204550;204551 204542 11 LLQQLAMTGSEEGDPR Unmodified 1743.8461 0.84614848 2463 Q14C86 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 66.685 66.818 2 3.3223E-10 75807 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 117.79 94.188 50087000 0 0 0 0 3405200 5970600 2852800 4872500 0 6836600 0 7721500 3151500 4965000 10312000 30674 2463 28045 257660;257661;257662;257663;257664;257665;257666;257667;257668 204552;204553;204554;204555;204556;204557 204554 6 LLQQLFLK Unmodified 1001.6274 0.62735256 4810 Q9P287 BCCIP BRCA2 and CDKN1A-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82.028 81.152 2 0.006533 93743 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 100.07 47.43 228260000 45123000 27346000 0 7280700 6151300 16009000 8183300 12484000 9237200 11440000 15808000 12153000 7598900 10201000 39242000 30675 4810 28046 257669;257670;257671;257672;257673;257674;257675;257676;257677;257678;257679;257680;257681;257682 204558;204559;204560;204561;204562;204563;204564;204565;204566;204567;204568;204569;204570;204571 204558 14 LLQQNTQLK Unmodified 1084.6241 0.6240581 2061 Q01664 TFAP4 Transcription factor AP-4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 30.327 30.604 2 0.005064 31852 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.743 30.775 90730000 0 0 0 0 7880400 8434900 0 0 0 11202000 14254000 14344000 0 12612000 22003000 30676 2061 28047 257683;257684;257685;257686;257687;257688;257689 204572;204573;204574;204575;204576;204577;204578 204574 6 LLQQQNDITGLSR Unmodified 1484.7947 0.79470526 5052 Q9UPN9 TRIM33 E3 ubiquitin-protein ligase TRIM33 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.43 2.06 1 13 1 1 1 1 1 2 1 1 1 1 1 1 1 57.36 57.066 2 1.9211E-25 63411 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 161.67 129.35 379650000 0 17205000 0 16618000 18259000 29503000 25112000 33680000 22596000 31241000 32661000 47544000 29803000 30517000 44907000 30677 5052 28048 257690;257691;257692;257693;257694;257695;257696;257697;257698;257699;257700;257701;257702;257703 204579;204580;204581;204582;204583;204584;204585;204586;204587;204588;204589;204590;204591;204592 204579 14 LLQQSGAQQFR Unmodified 1274.6731 0.67313356 3957 Q96QD9 FYTTD1 UAP56-interacting factor yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 38.66 38.889 2 0.0036389 42130 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 63.419 4.6038 7218100 0 0 0 0 0 0 0 3926600 0 0 0 0 0 3291500 0 30678 3957 28049 257704;257705 204593;204594 204594 2 LLQSAHPVR Unmodified 1019.5876 0.58761301 4345 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 19.593 19.745 2 0.014092 20542 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 58.815 43.317 21566000 0 0 0 2926200 2316700 3092000 1738900 0 0 0 0 3189900 0 3874300 4428400 30679 4345 28050 257706;257707;257708;257709;257710;257711;257712 204595 204595 1 LLQSGGAK Unmodified 772.4443 0.44430282 3621 Q92547 TOPBP1 DNA topoisomerase 2-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 44.766 44.938 2 0.025448 50439 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 58.687 4.6306 161430000 0 0 0 9907400 6568800 9379800 8310500 8668500 5548300 20801000 22111000 32964000 10991000 7950600 18230000 30680 3621 28051 257713;257714;257715;257716;257717;257718;257719;257720;257721;257722;257723;257724 204596;204597;204598;204599 204596 4 LLQSGNSDVVR Unmodified 1186.6306 0.63060004 2346 Q13835 PKP1 Plakophilin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.408 33.593 2 7.816E-05 36689 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 111.61 49.645 389660000 0 0 0 68034000 12502000 10191000 15122000 205500000 6651100 9323300 15585000 17984000 17513000 6506600 4748000 30681 2346 28052 257725;257726;257727;257728;257729;257730;257731;257732;257733;257734;257735;257736 204600;204601;204602;204603;204604;204605;204606;204607;204608;204609;204610;204611 204606 12 LLQSIGQAPESISEK Unmodified 1598.8516 0.85155143 2318 Q13564 NAE1 NEDD8-activating enzyme E1 regulatory subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 64.889 63.33 2 6.983E-38 80108 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 168.3 139.34 1468700000 15099000 1350100000 5067700 3966500 3048500 5279700 5634900 0 3859100 0 12884000 13788000 4965000 13143000 31881000 30682 2318 28053 257737;257738;257739;257740;257741;257742;257743;257744;257745;257746;257747;257748;257749;257750;257751;257752 204612;204613;204614;204615;204616;204617;204618;204619;204620;204621;204622;204623;204624;204625 204615 14 LLQSLGLK Unmodified 870.55385 0.55385327 2444 Q14764 MVP Major vault protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 63.388 62.434 2 0.0068442 70049 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 94.262 14.808 157420000 40382000 29459000 0 7267100 0 5264300 5756200 8073700 4817100 5988200 9298500 9836700 9389500 6667000 15220000 30683 2444 28054 257753;257754;257755;257756;257757;257758;257759;257760;257761;257762;257763;257764;257765 204626;204627;204628;204629;204630;204631;204632;204633 204632 8 LLQSLLDTR Unmodified 1057.6132 0.61315906 2228 Q13045 FLII Protein flightless-1 homolog yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.988 73.053 2 0.011037 84516 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 63.419 23.756 63131000 0 0 0 3167300 3277200 7298700 2480800 3930500 5207200 5298900 6399300 6573600 4357900 6072300 9067100 30684 2228 28055 257766;257767;257768;257769;257770;257771;257772;257773;257774;257775;257776;257777 204634;204635;204636;204637 204637 4 LLQSNPVLEAFGNAK Unmodified 1599.8621 0.86205654 121 O00159 MYO1C Unconventional myosin-Ic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 84.791 84.856 2 5.2736E-07 97983 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 115.29 85.813 115100000 0 0 0 3247600 9633500 8168300 7474800 12186000 7487100 11592000 10876000 13339000 8136700 6504200 16456000 30685 121 28056 257778;257779;257780;257781;257782;257783;257784;257785;257786;257787;257788;257789 204638;204639;204640;204641;204642;204643;204644;204645;204646;204647;204648;204649;204650;204651 204643 13 LLQSQLQVK Unmodified 1055.6339 0.63389451 3874 Q96I25 RBM17 Splicing factor 45 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47.852 46.798 2 0.0036746 51533 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 89.296 41.553 450340000 54190000 100880000 1380600 12480000 15406000 21601000 21463000 17346000 15366000 28052000 31376000 41334000 29159000 22897000 37415000 30686 3874 28057 257790;257791;257792;257793;257794;257795;257796;257797;257798;257799;257800;257801;257802;257803;257804 204652;204653;204654;204655;204656;204657;204658;204659;204660;204661;204662;204663;204664;204665 204661 9 LLQSSGADFHK Unmodified 1201.6091 0.60913632 3368 Q8N8A2 ANKRD44 Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B yes yes 0 0 0 By MS/MS By MS/MS By matching 2 0 3 1 1 1 35.447 30.586 3 0.026888 42605 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.784 27.012 39786000 19465000 9199100 11122000 0 0 0 0 0 0 0 0 0 0 0 0 30687 3368 28058 257805;257806;257807 204666 204666 0 LLQTAATAAQQGGQANHPTAAVVTEK Unmodified 2575.3354 0.33542766 1419 P40763 STAT3 Signal transducer and activator of transcription 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.108 52.251 3 3.2093E-141 59146 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 179.38 163.4 377780000 0 0 0 17820000 22055000 41578000 22518000 22637000 12164000 52260000 28475000 37669000 33585000 28850000 58170000 30688 1419 28059 257808;257809;257810;257811;257812;257813;257814;257815;257816;257817;257818;257819 204667;204668;204669;204670;204671;204672;204673;204674;204675;204676;204677;204678;204679;204680;204681;204682 204668 16 LLQTCFSSPADDSMDR Oxidation (M) 1857.7873 0.78731297 4771 Q9NZL4 HSPBP1 Hsp70-binding protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59.97 58.86 2 1.8423E-23 67514 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 118.48 114.72 443040000 15723000 346170000 3364900 3733000 3431900 5637600 5216700 3825100 3286400 8468700 7550100 6298000 7367600 8776300 14194000 30689 4771 28060 257820;257821;257822;257823;257824;257825;257826;257827;257828;257829;257830;257831;257832;257833;257834 204683;204684;204685;204686;204687;204688;204689;204690;204691;204692;204693;204694;204695;204696;204697 204684 6138 15 LLQTCFSSPADDSMDR Unmodified 1841.7924 0.79239835 4771 Q9NZL4 HSPBP1 Hsp70-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 3 1 1 1 1 1 1 1 1 1 1 1 68.049 66.486 2;3 1.3172E-50 83556 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 216.81 216.81 886180000 12223000 800490000 0 2206800 2277900 5915100 2487300 3550100 0 8318000 9402000 7262900 3614000 7251300 21178000 30690 4771 28060 257835;257836;257837;257838;257839;257840;257841;257842;257843;257844;257845;257846;257847;257848;257849 204698;204699;204700;204701;204702;204703;204704;204705;204706;204707;204708;204709;204710;204711;204712;204713;204714 204702 16 LLQTDDEEEAGLLELLK Unmodified 1927.999 0.99900353 1754 P55060 CSE1L Exportin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.93 3.82 5 3 7 3 3 2 1 1 1 1 1 1 1 95.846 93.819 2;3 3.3604E-70 112483 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 168.05 156.53 659340000 323080000 235610000 68437000 0 0 1030800 0 734350 0 10591000 3308400 2229500 0 1988200 12330000 30691 1754 28061 257850;257851;257852;257853;257854;257855;257856;257857;257858;257859;257860;257861;257862;257863;257864 204715;204716;204717;204718;204719;204720;204721;204722;204723;204724;204725;204726;204727;204728;204729 204721 14 LLQTIAVLEAQR Unmodified 1353.798 0.79799972 3283 Q8IYH5 ZZZ3 ZZ-type zinc finger-containing protein 3 yes yes 0 0 0 By MS/MS 10 0 1 1 80.4 80.498 2 0.011735 93094 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 77.662 39.935 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30692 3283 28062 257865 204730 204730 1 LLQTLPQLR Unmodified 1080.6655 0.66552898 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.69 72.759 2 0.0037093 82808 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 95.909 50.191 130120000 0 0 0 6035600 8579500 12427000 7017800 6452800 6408400 14780000 10044000 16732000 10875000 12524000 18239000 30693 2775 28063 257866;257867;257868;257869;257870;257871;257872;257873;257874;257875;257876;257877 204731;204732;204733;204734;204735;204736;204737;204738;204739;204740;204741;204742 204738 12 LLQTMNLTQK Unmodified 1188.6536 0.65364367 2652 Q2M389 KIAA1033 WASH complex subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 56.715 55.426 2 1.0407E-10 71743 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 172.21 92.745 85014000 28981000 26347000 0 2018600 0 2895600 2405900 2677400 0 3711500 0 5565900 0 3322900 7087600 30694 2652 28064 257878;257879;257880;257881;257882;257883;257884;257885;257886;257887;257888;257889 204743;204744;204745;204746;204747;204748;204749;204750;204751;204752;204753;204754;204755;204756;204757 204746 15 LLQTSNITK Unmodified 1016.5866 0.58660996 2248 Q13177;O75914 PAK2;PAK3 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34;Serine/threonine-protein kinase PAK 3 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.406 34.589 2 0.005778 37232 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.827 28.323 611030000 0 0 0 23578000 19192000 65935000 34961000 25839000 23346000 55247000 106700000 82870000 40695000 47284000 85383000 30695 2248 28065 257890;257891;257892;257893;257894;257895;257896;257897;257898;257899;257900;257901 204758;204759;204760;204761;204762;204763;204764;204765;204766;204767;204768;204769;204770;204771 204768 12 LLQTTNNSPMNSK Unmodified 1446.7137 0.71367774 124 O00178 GTPBP1 GTP-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34.056 33.394 2 1.2507E-29 42384 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 189.72 167.08 106810000 5744600 49783000 0 2498800 2418700 6659700 2547500 3688600 3581900 4096900 5362500 4671100 4020500 4642300 7097400 30696 124 28066 257902;257903;257904;257905;257906;257907;257908;257909;257910;257911;257912;257913;257914;257915 204772;204773;204774;204775;204776;204777;204778;204779;204780;204781;204782;204783 204775 11 LLQTTNNSPMNSK Oxidation (M) 1462.7086 0.70859237 124 O00178 GTPBP1 GTP-binding protein 1 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 22.579 18.622 2 0.0050598 24842 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.5 54.798 12886000 0 12886000 0 0 0 0 0 0 0 0 0 0 0 0 0 30697 124 28066 257916;257917 204784 204784 162 1 LLQVASPFLEPHLVR Unmodified 1717.9879 0.98792576 533 O75694 NUP155 Nuclear pore complex protein Nup155 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 85.359 85.465 3 0.00019786 98703 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.797 59.014 29717000 0 0 0 0 0 4516800 0 0 0 4430000 0 0 0 1980200 18790000 30698 533 28067 257918;257919;257920;257921 204785;204786;204787 204787 3 LLQVGEEGPQAVAK Unmodified 1437.7827 0.78274359 2426 Q14674 ESPL1 Separin yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 56.463 56.352 2 0.0027637 64616 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 62.303 44.438 14000000 0 0 0 2017600 2403200 4692900 0 2281200 0 0 2605200 0 0 0 0 30699 2426 28068 257922;257923;257924;257925;257926;257927;257928 204788;204789;204790;204791;204792 204792 5 LLQVNTGAK Unmodified 942.54983 0.54983053 2121 Q05BV3 EML5 Echinoderm microtubule-associated protein-like 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 23.723 19.699 2 0.016919 28384 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.469 14.665 56315000 4024400 46353000 5937100 0 0 0 0 0 0 0 0 0 0 0 0 30700 2121 28069 257929;257930;257931 204793 204793 1 LLRDDEAHLQEDQGEEECFHDCSASFEEEPGADK Unmodified 3991.6385 0.63848307 4034 Q99614 TTC1 Tetratricopeptide repeat protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 70.452 62.167 4 5.496E-33 82910 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.239 79.579 15862000 15862000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30701 4034 28070 257932 204794 204794 1 LLRDYQELMNTK Oxidation (M) 1538.7763 0.776278 780;50 CON__ENSEMBL:ENSBTAP00000038253;P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 no no 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.66 1.6 3 1 86 3 1 11 4 7 8 12 7 6 4 9 6 6 6 50.145 50.11 2;3 9.5526E-23 51676 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 151.26 78.614 + 62003000000 51947000 0 4477000 10865000000 2213400000 5741700000 2798700000 8812000000 571580000 7753500000 2844200000 9145100000 5525100000 2630500000 3045900000 30702 50;780 28071 257933;257934;257935;257936;257937;257938;257939;257940;257941;257942;257943;257944;257945;257946;257947;257948;257949;257950;257951;257952;257953;257954;257955;257956;257957;257958;257959;257960;257961;257962;257963;257964;257965;257966;257967;257968;257969;257970;257971;257972;257973;257974;257975;257976;257977;257978;257979;257980;257981;257982;257983;257984;257985;257986;257987;257988;257989;257990;257991;257992;257993;257994;257995;257996;257997;257998;257999;258000;258001;258002;258003;258004;258005;258006;258007;258008;258009;258010;258011;258012;258013;258014;258015;258016;258017;258018;258019;258020;258021;258022 204795;204796;204797;204798;204799;204800;204801;204802;204803;204804;204805;204806;204807;204808;204809;204810;204811;204812;204813;204814;204815;204816;204817;204818;204819;204820;204821;204822;204823;204824;204825;204826;204827;204828;204829;204830;204831;204832;204833;204834;204835;204836;204837;204838;204839;204840;204841;204842;204843;204844;204845;204846;204847;204848;204849;204850;204851;204852;204853;204854;204855;204856;204857;204858;204859;204860;204861;204862;204863;204864;204865;204866;204867;204868;204869;204870;204871;204872;204873 204811 42 70 LLRDYQELMNTK Unmodified 1522.7814 0.78136338 780;50 CON__ENSEMBL:ENSBTAP00000038253;P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 no no 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.35 2.19 7 79 4 2 1 12 4 7 4 12 6 6 4 5 8 8 3 69.885 69.718 2;3 1.5648E-52 74395 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 215.08 180.19 + 28720000000 33887000 1741100 775160 2827300000 663110000 1785700000 641100000 5664000000 1126600000 2551100000 1793900000 4576800000 2836100000 1631000000 2587100000 30703 50;780 28071 258023;258024;258025;258026;258027;258028;258029;258030;258031;258032;258033;258034;258035;258036;258037;258038;258039;258040;258041;258042;258043;258044;258045;258046;258047;258048;258049;258050;258051;258052;258053;258054;258055;258056;258057;258058;258059;258060;258061;258062;258063;258064;258065;258066;258067;258068;258069;258070;258071;258072;258073;258074;258075;258076;258077;258078;258079;258080;258081;258082;258083;258084;258085;258086;258087;258088;258089;258090;258091;258092;258093;258094;258095;258096;258097;258098;258099;258100;258101;258102;258103;258104;258105;258106;258107;258108 204874;204875;204876;204877;204878;204879;204880;204881;204882;204883;204884;204885;204886;204887;204888;204889;204890;204891;204892;204893;204894;204895;204896;204897;204898;204899;204900;204901;204902;204903;204904;204905;204906;204907;204908;204909;204910;204911;204912;204913;204914;204915;204916;204917;204918;204919;204920;204921;204922;204923;204924;204925;204926;204927;204928;204929;204930;204931;204932;204933;204934;204935;204936;204937;204938;204939;204940;204941;204942;204943;204944;204945;204946;204947;204948;204949;204950;204951;204952;204953;204954;204955;204956;204957;204958;204959;204960;204961;204962;204963;204964;204965;204966;204967;204968;204969;204970;204971;204972;204973 204967 87 LLRDYQELMNVK Oxidation (M) 1536.797 0.79701344 79;96;960;2056;83 CON__P35908v2;P35908;CON__P35908;CON__Q01546;P12035;CON__P12035;Q01546;CON__Q5XKE5;Q5XKE5 KRT2;KRT3;KRT76;KRT79 Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 3;Keratin, type II cytoskeletal 2 oral;Keratin, type II cytoskeletal 79 no no 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.36 2.17 2 23 1 1 3 2 2 2 2 1 1 2 2 2 2 2 55.501 55.262 2;3 6.1594E-23 62282 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 152.69 116.73 + 9071600000 7826500 0 229120 1386400000 412740000 964500000 667750000 1399300000 99411000 142590000 755100000 1289700000 1088700000 490010000 367360000 30704 79;83;960;2056;96 28072 258109;258110;258111;258112;258113;258114;258115;258116;258117;258118;258119;258120;258121;258122;258123;258124;258125;258126;258127;258128;258129;258130;258131;258132;258133 204974;204975;204976;204977;204978;204979;204980;204981;204982;204983;204984;204985;204986;204987;204988;204989;204990;204991;204992;204993;204994;204995;204996;204997;204998;204999 204983 115 17 LLRDYQELMNVK Unmodified 1520.8021 0.80209882 79;96;960;2056;83 CON__P35908v2;P35908;CON__P35908;CON__Q01546;P12035;CON__P12035;Q01546;CON__Q5XKE5;Q5XKE5 KRT2;KRT3;KRT76;KRT79 Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 3;Keratin, type II cytoskeletal 2 oral;Keratin, type II cytoskeletal 79 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 28 2 2 3 2 2 2 3 3 2 2 2 3 71.998 72.083 2;3 1.57E-23 83404 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 165.63 137.43 + 2488200000 0 0 0 96173000 42020000 278810000 49020000 409440000 128990000 223120000 168200000 365830000 233630000 157500000 335430000 30705 79;83;960;2056;96 28072 258134;258135;258136;258137;258138;258139;258140;258141;258142;258143;258144;258145;258146;258147;258148;258149;258150;258151;258152;258153;258154;258155;258156;258157;258158;258159;258160;258161 205000;205001;205002;205003;205004;205005;205006;205007;205008;205009;205010;205011;205012;205013;205014;205015;205016;205017;205018;205019;205020;205021;205022;205023;205024;205025;205026;205027;205028;205029;205030;205031;205032 205024 25 LLREDQLEPVTK Unmodified 1439.7984 0.79839365 5190 Q9Y4B4 RAD54L2 Helicase ARIP4 yes yes 0 0 1 By MS/MS 2 0 1 1 52.076 48.155 3 0.011486 60420 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 50.207 37.922 7763200 0 0 7763200 0 0 0 0 0 0 0 0 0 0 0 0 30706 5190 28073 258162 205033 205033 1 LLREIEK Unmodified 899.54402 0.54401687 3929 Q96MX6 WDR92 WD repeat-containing protein 92 yes yes 0 0 1 By MS/MS 2 0 1 1 31.053 25.334 2 0.045292 35633 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 129.68 9.0616 138010000 138010000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30707 3929 28074 258163 205034 205034 0 LLREYQELMNTK Oxidation (M) 1552.7919 0.79192806 74 CON__P13647;P13647 KRT5 Keratin, type II cytoskeletal 5 no no 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 45 4 4 4 3 4 4 3 4 3 4 4 4 47.799 47.951 2;3 6.0565E-06 54473 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 105.65 93.27 + 2772200000 0 0 0 540210000 119940000 221620000 92962000 418020000 142480000 177410000 205320000 243160000 345070000 131430000 134610000 30708 74 28075 258164;258165;258166;258167;258168;258169;258170;258171;258172;258173;258174;258175;258176;258177;258178;258179;258180;258181;258182;258183;258184;258185;258186;258187;258188;258189;258190;258191;258192;258193;258194;258195;258196;258197;258198;258199;258200;258201;258202;258203;258204;258205;258206;258207;258208 205035;205036;205037;205038;205039;205040;205041;205042;205043;205044;205045;205046;205047;205048;205049;205050;205051;205052;205053;205054;205055;205056 205038 97 17 LLREYQELMNTK Unmodified 1536.797 0.79701344 74 CON__P13647;P13647 KRT5 Keratin, type II cytoskeletal 5 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 3 1 2 2 1 2 2 2 2 2 2 64.792 64.865 2;3 1.9193E-18 73845 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 160.18 90.083 + 488150000 0 0 0 35432000 9484300 40027000 0 94900000 25340000 43912000 34150000 60127000 46417000 24878000 73482000 30709 74 28075 258209;258210;258211;258212;258213;258214;258215;258216;258217;258218;258219;258220;258221;258222;258223;258224;258225;258226;258227;258228;258229 205057;205058;205059;205060;205061;205062;205063;205064;205065;205066;205067;205068;205069;205070;205071;205072;205073;205074;205075;205076;205077 205071 17 LLRIDELQVVK Unmodified 1324.8078 0.80783613 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.238 76.331 3 0.00034848 88087 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 67.08 44.194 79973000 0 0 0 2916200 0 6331300 4085800 4505300 8093300 8489400 6448900 8422100 6994300 5787800 17899000 30710 619 28076 258230;258231;258232;258233;258234;258235;258236;258237;258238;258239;258240 205078;205079;205080;205081;205082;205083;205084 205078 7 LLRLEGELTK Unmodified 1170.6972 0.69722304 2475 Q15020 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 55.887 56.085 3 0.015605 63858 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 45.653 21.564 102000000 0 0 0 0 1895900 5657300 3995800 4726700 4942100 8290000 9596100 12671000 13863000 12942000 23424000 30711 2475 28077 258241;258242;258243;258244;258245;258246;258247;258248;258249;258250;258251 205085;205086 205086 2 LLRSGADPNLK Unmodified 1182.6721 0.67207093 4235 Q9BXW6 OSBPL1A Oxysterol-binding protein-related protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 35.945 29.535 3 0.023219 41389 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.73 27.071 10425000 10425000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30712 4235 28078 258252 205087 205087 1 LLSAACR Unmodified 789.41671 0.41670786 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 20.399 20.589 2 0.024196 20825 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 83.287 51.708 356220000 0 0 0 15024000 8650200 32463000 15607000 12710000 13124000 30872000 39149000 57807000 0 37705000 93113000 30713 1565 28079 258253;258254;258255;258256;258257;258258;258259;258260;258261;258262;258263 205088;205089 205089 2 LLSAAYITSHLK Unmodified 1315.75 0.7499869 2368 Q14119 VEZF1 Vascular endothelial zinc finger 1 yes yes 0 0 0 By matching By matching By MS/MS By matching 10 0 4 1 1 1 1 76.156 76.326 3 0.022234 88162 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 36 25.896 31889000 0 0 0 0 0 0 5132500 9756800 0 0 0 10031000 0 6969100 0 30714 2368 28080 258264;258265;258266;258267 205090 205090 1 LLSADADGQIK Unmodified 1129.5979 0.59790293 5124 Q9Y2X0 MED16 Mediator of RNA polymerase II transcription subunit 16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 40.847 41.363 2 0.029524 45668 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 39.001 14.058 2022500000 0 0 0 0 0 0 0 0 0 0 568550000 0 570060000 0 883850000 30715 5124 28081 258268;258269;258270 205091;205092;205093 205092 3 LLSAGATK Unmodified 759.44905 0.44905385 957 P11908 PRPS2 Ribose-phosphate pyrophosphokinase 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17.06 16.458 2 0.018072 19940 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 89.296 19.912 510860000 338530000 4879400 36853000 4790200 0 15950000 8551900 8262400 5411000 12543000 17478000 10608000 9719100 17716000 19575000 30716 957 28082 258271;258272;258273;258274;258275;258276;258277;258278;258279;258280;258281;258282;258283;258284 205094;205095 205095 2 LLSAGATR Unmodified 787.4552 0.45520186 1818 P60891 PRPS1 Ribose-phosphate pyrophosphokinase 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.444 19.643 2 0.035164 20085 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 96.492 39.028 307370000 0 0 0 13905000 16078000 28707000 21414000 22555000 11857000 32635000 34075000 35502000 19363000 22158000 49126000 30717 1818 28083 258285;258286;258287;258288;258289;258290;258291;258292;258293;258294;258295;258296 205096 205096 0 LLSALCILPQPEDMNER Oxidation (M) 2013.9863 0.98634713 417 O60610 DIAPH1 Protein diaphanous homolog 1 yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 87.319 87.452 2 0.00042008 101439 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 56.225 50.732 4469200 0 0 0 0 0 0 0 0 0 1897500 0 0 0 0 2571700 30718 417 28084 258297;258298 205097 205097 522 1 LLSALCPEEPPVHSSAQIVSK Unmodified 2261.1726 0.172568 4593 Q9NR50 EIF2B3 Translation initiation factor eIF-2B subunit gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 74.656 73.133 3 1.6539E-24 93492 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 112.58 96.638 642610000 286060000 205750000 68430000 0 5270900 6545400 0 0 0 6946400 12115000 17293000 9825600 11940000 12435000 30719 4593 28085 258299;258300;258301;258302;258303;258304;258305;258306;258307;258308;258309;258310;258311 205098;205099;205100;205101;205102;205103;205104;205105;205106;205107;205108;205109 205105 12 LLSAVDILGEK Unmodified 1156.6703 0.67033959 2388 Q14191 WRN Werner syndrome ATP-dependent helicase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 6.8 3.92 2 3 1 1 1 1 1 83.386 81.995 2 0.0092772 102257 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.655 35.409 34793000 0 28617000 1880200 0 0 2244000 1155100 0 0 0 0 0 0 896610 0 30720 2388 28086 258312;258313;258314;258315;258316 205110;205111;205112 205112 2 LLSAVSSTK Unmodified 904.52295 0.52294707 3621 Q92547 TOPBP1 DNA topoisomerase 2-binding protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.066 28.261 2 0.0083723 29993 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 69.812 16.257 105540000 0 0 0 4035300 5286900 10063000 7386000 6650300 7273900 8523600 11458000 14259000 7949300 7400800 15250000 30721 3621 28087 258317;258318;258319;258320;258321;258322;258323;258324;258325;258326;258327;258328 205113;205114;205115;205116;205117;205118;205119;205120;205121 205118 7 LLSCSADGTLR Unmodified 1191.5918 0.59177169 371 O43815 STRN Striatin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.438 41.616 2 0.00053235 46352 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 84.213 43.183 78811000 0 0 0 5370900 3951100 4681100 4580400 2898500 4624100 6922600 9152900 10144000 7367700 8195600 10921000 30722 371 28088 258329;258330;258331;258332;258333;258334;258335;258336;258337;258338;258339;258340 205122;205123;205124;205125;205126;205127;205128;205129;205130;205131;205132;205133;205134 205127 13 LLSDATVEK Unmodified 974.52843 0.52842638 2403 Q14320 FAM50A Protein FAM50A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.129 32.316 2 0.0031256 34135 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.069 30.387 448200000 0 0 0 21264000 20806000 39856000 35076000 25366000 18099000 44853000 55123000 53200000 37657000 34751000 62152000 30723 2403 28089 258341;258342;258343;258344;258345;258346;258347;258348;258349;258350;258351;258352 205135;205136;205137;205138;205139;205140;205141;205142;205143;205144;205145;205146 205138 11 LLSDDYEQVR Unmodified 1236.5986 0.59863121 3871 Q96HW7 INTS4 Integrator complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 47.878 48.103 2 0.0029039 54037 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 78.934 61.464 71483000 0 0 0 3158600 0 4548600 4938800 5247500 4158700 8065600 8767200 7932400 9363300 8174600 7128300 30724 3871 28090 258353;258354;258355;258356;258357;258358;258359;258360;258361;258362;258363 205147;205148;205149;205150;205151;205152;205153;205154;205155;205156;205157 205148 11 LLSDFLDSEVSELRTGAAEGLAK Unmodified 2420.2435 0.24348433 4079 Q9BPX3 NCAPG Condensin complex subunit 3 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 97.286 91.893 3 1.3926E-07 115507 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.805 53.513 59417000 29364000 30053000 0 0 0 0 0 0 0 0 0 0 0 0 0 30725 4079 28091 258364;258365;258366 205158;205159;205160 205160 3 LLSDLCGTVMSTTDVEK Oxidation (M) 1883.8856 0.88563003 2696 Q53EL6 PDCD4 Programmed cell death protein 4 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 75.398 70.458 2 3.6791E-35 88158 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.54 114.53 45237000 0 45237000 0 0 0 0 0 0 0 0 0 0 0 0 0 30726 2696 28092 258367;258368 205161;205162 205161 4351 2 LLSDLCGTVMSTTDVEK Unmodified 1867.8907 0.89071541 2696 Q53EL6 PDCD4 Programmed cell death protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 82.211 77.545 2 1.0608E-69 97109 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 168.31 149.18 270570000 9752300 257250000 3565200 0 0 0 0 0 0 0 0 0 0 0 0 30727 2696 28092 258369;258370;258371;258372 205163;205164;205165;205166 205163 4 LLSDLSAFGGAAR Unmodified 1276.6776 0.67755023 3212 Q86YV9 HPS6 Hermansky-Pudlak syndrome 6 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.17 77.23 2 2.3073E-05 89068 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 90.108 60.299 115460000 0 0 0 5605900 5896400 7926900 7760200 9731400 6683800 12345000 9633800 12125000 9254500 8637100 19856000 30728 3212 28093 258373;258374;258375;258376;258377;258378;258379;258380;258381;258382;258383;258384 205167;205168;205169;205170;205171;205172;205173;205174;205175;205176;205177;205178 205173 12 LLSDPAAGAYK Unmodified 1104.5815 0.58152458 5041 Q9UNS1 TIMELESS Protein timeless homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 45.57 45.775 2 0.008896 51554 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 51.066 26.143 43305000 0 0 0 0 2412100 7994100 0 4611500 0 5130300 3959000 0 5165500 6300600 7731800 30729 5041 28094 258385;258386;258387;258388;258389;258390;258391;258392 205179;205180;205181;205182;205183;205184 205180 5 LLSDPNYGVHLPAVK Unmodified 1621.8828 0.88279198 4151 Q9BTV4 TMEM43 Transmembrane protein 43 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 74.851 74.683 3 0.0012705 86052 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 49.298 36.938 11348000 0 0 0 3858600 0 0 0 7489200 0 0 0 0 0 0 0 30730 4151 28095 258393;258394 205185;205186 205185 2 LLSDTVASDPGVLQEQLATTK Unmodified 2185.1478 0.14779303 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS 2 0 1 1 84.574 79.83 3 1.4358E-38 99215 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.79 113.87 170770000 0 170770000 0 0 0 0 0 0 0 0 0 0 0 0 0 30731 5049 28096 258395 205187 205187 1 LLSEEVFDFSSGQITQVK Unmodified 2026.0259 0.025886985 237 O14980 XPO1 Exportin-1 yes yes 0 0 0 By MS/MS By MS/MS 2.4 0.49 3 2 1 4 92.575 87.702 2;3 0 109763 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 317.99 297.66 209390000 35577000 173810000 0 0 0 0 0 0 0 0 0 0 0 0 0 30732 237 28097 258396;258397;258398;258399;258400 205188;205189;205190;205191;205192;205193;205194 205189 6 LLSEGADVNAK Unmodified 1115.5823 0.58225287 4315 Q9H078 CLPB Caseinolytic peptidase B protein homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 31.271 31.609 2 0.0077188 33286 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.327 21.797 17369000 0 0 0 0 0 0 2282200 0 2153500 0 2665300 0 4570800 0 5697400 30733 4315 28098 258401;258402;258403;258404;258405;258406;258407 205195;205196;205197;205198;205199;205200 205196 6 LLSEHQVTSSGDK Unmodified 1399.6943 0.69432251 1462 P42684 ABL2 Abelson tyrosine-protein kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 1 2 2 1 2 2 2 2 2 2 2 22.004 22.254 2;3 0.0022568 22045 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.532 32.656 351470000 0 0 0 23260000 17565000 25047000 21962000 25122000 22272000 43868000 41934000 45345000 25343000 20667000 39085000 30734 1462 28099 258408;258409;258410;258411;258412;258413;258414;258415;258416;258417;258418;258419;258420;258421;258422;258423;258424;258425;258426;258427;258428 205201;205202;205203;205204;205205;205206;205207;205208;205209;205210 205202 5 LLSELSNPEISK Unmodified 1328.7187 0.71874635 5186 Q9Y485 DMXL1 DmX-like protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 68.524 63.247 2 0.036264 80864 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 55.649 24.194 66541000 0 66541000 0 0 0 0 0 0 0 0 0 0 0 0 0 30735 5186 28100 258429;258430 205211 205211 1 LLSESAQPLK Unmodified 1084.6128 0.61282471 4380 Q9H3N1 TMX1 Thioredoxin-related transmembrane protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 44.343 42.737 2 0.0080794 48294 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 60.91 13.829 63706000 0 19180000 0 11841000 15202000 0 0 17483000 0 0 0 0 0 0 0 30736 4380 28101 258431;258432;258433;258434 205212;205213 205213 2 LLSFFGYDQAESEVEK Unmodified 1860.8782 0.87816011 2799 Q5THJ4 VPS13D Vacuolar protein sorting-associated protein 13D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 23.937 24.101 3 0.0098704 24771 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 22.097 9.3046 44777000 0 0 0 3888000 2794100 3288600 2730400 2974500 2977300 5519200 4507300 6668200 6108900 3320500 0 30737 2799 28102 258435;258436;258437;258438;258439;258440;258441;258442;258443;258444;258445 205214;205215 205215 2 LLSFLEQSEHK Unmodified 1329.6929 0.69286595 3969 Q96RL1 UIMC1 BRCA1-A complex subunit RAP80 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 66.698 66.829 3 0.0022428 75615 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.694 55.181 41350000 0 0 0 0 1005700 4803700 2312500 3240300 2631100 3603300 0 5154300 3345400 0 15254000 30738 3969 28103 258446;258447;258448;258449;258450;258451;258452;258453;258454 205216;205217;205218 205217 3 LLSFSPEEFPTLK Unmodified 1506.797 0.79699667 2736 Q5JSZ5 PRRC2B Protein PRRC2B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 89.357 89.466 2 0.00087449 103057 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 68.893 41.272 28576000 0 0 0 0 1008700 1767000 1398400 2134400 2200700 4987000 2797800 2258200 1526900 1930500 6566900 30739 2736 28104 258455;258456;258457;258458;258459;258460;258461;258462;258463;258464;258465 205219;205220;205221;205222;205223;205224;205225;205226;205227;205228;205229;205230 205226 12 LLSGASTK Unmodified 775.44397 0.44396847 3112 Q7Z6J0 SH3RF1 E3 ubiquitin-protein ligase SH3RF1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.28 1 2 8 1 2 1 1 1 1 1 1 1 1 13.406 12.572 2 0.012959 15566 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.523 14.164 141580000 419280 99614000 0 0 3547100 0 4748600 0 3783300 0 5544400 7137200 5132500 4466600 7185000 30740 3112 28105 258466;258467;258468;258469;258470;258471;258472;258473;258474;258475;258476 205231;205232;205233 205232 2 LLSGGSVLDIIK Unmodified 1213.7282 0.72818882 684 O95747 OXSR1 Serine/threonine-protein kinase OSR1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87.661 86.638 2 0.0039595 109682 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.04 60.482 292320000 107090000 92606000 12099000 0 2795100 6961500 3247600 5272500 3823000 11735000 6294200 6023300 4970900 6853700 22545000 30741 684 28106 258477;258478;258479;258480;258481;258482;258483;258484;258485;258486;258487;258488;258489;258490 205234;205235;205236;205237;205238;205239;205240 205236 7 LLSGLQEKPDQK Unmodified 1354.7456 0.7456298 3663 Q92797 SYMPK Symplekin yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 34.999 35.262 3 0.00073469 38367 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 70.728 50.598 128990000 0 0 0 0 9021000 13826000 0 0 13061000 17563000 14311000 16438000 19278000 0 25498000 30742 3663 28107 258491;258492;258493;258494;258495;258496;258497;258498 205241;205242;205243;205244;205245;205246;205247;205248;205249;205250 205245 10 LLSGPLDQVR Unmodified 1096.6241 0.6240581 4386 Q9H3S7 PTPN23 Tyrosine-protein phosphatase non-receptor type 23 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.684 62.78 2 0.0033461 71605 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 76.827 50.888 71211000 0 0 0 4576200 3827600 7406000 6824200 5851600 3963800 6293100 7242600 7443700 4790300 4528200 8463900 30743 4386 28108 258499;258500;258501;258502;258503;258504;258505;258506;258507;258508;258509;258510 205251;205252;205253;205254;205255;205256;205257;205258;205259;205260;205261;205262 205252 12 LLSGPSQESPQTLGK Unmodified 1540.8097 0.80968662 4208 Q9BWE0 REPIN1 Replication initiator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 49 48.701 2 1.6817E-84 54761 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 229.29 159.27 978690000 0 11104000 0 70704000 68163000 89186000 60515000 46106000 54379000 83651000 83329000 139940000 91678000 67224000 112720000 30744 4208 28109 258511;258512;258513;258514;258515;258516;258517;258518;258519;258520;258521;258522;258523 205263;205264;205265;205266;205267;205268;205269;205270;205271;205272;205273;205274;205275;205276;205277;205278;205279 205265 17 LLSGSESSSK Unmodified 993.49785 0.49785453 2720 Q5BKY9 FAM133B Protein FAM133B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 10.522 10.355 2 0.0023793 12118 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.52 81.548 53131000 0 26440000 0 2180700 1648700 1964400 2989900 2055500 1685300 2692200 0 3598600 3326400 1800500 2749400 30745 2720 28110 258524;258525;258526;258527;258528;258529;258530;258531;258532;258533;258534;258535 205280;205281;205282;205283;205284;205285;205286 205281 7 LLSILGASEEDNVK Unmodified 1486.7879 0.78788854 3445 Q8NFG4 FLCN Folliculin yes yes 0 0 0 By MS/MS 2 0 1 1 81.642 76.937 2 0.00082432 95794 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.14 88.573 34794000 0 34794000 0 0 0 0 0 0 0 0 0 0 0 0 0 30746 3445 28111 258536 205287 205287 1 LLSISGK Unmodified 716.44324 0.44324019 830 P06748 NPM1 Nucleophosmin yes yes 0 0 0 By MS/MS By matching By MS/MS 2 0 3 1 1 1 42.277 37.093 1 0.047043 51224 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 129.39 0 1258500000 514960000 696290000 47238000 0 0 0 0 0 0 0 0 0 0 0 0 30747 830 28112 258537;258538;258539 205288 205288 0 LLSITVR Unmodified 800.51199 0.51198846 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 59.93 60.103 2 0.025135 68530 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 81.381 3.6616 123390000 0 0 0 0 0 14584000 11181000 11585000 10471000 20165000 15196000 0 15810000 24398000 0 30748 1986 28113 258540;258541;258542;258543;258544;258545;258546;258547 205289;205290 205289 2 LLSLASTASSQK Unmodified 1204.6663 0.66631685 2925 Q6P1X5 TAF2 Transcription initiation factor TFIID subunit 2 yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 56.218 49.22 2 0.0058027 66854 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.434 43.285 40341000 12134000 28207000 0 0 0 0 0 0 0 0 0 0 0 0 0 30749 2925 28114 258548;258549 205291;205292 205292 2 LLSLLEK Unmodified 814.51641 0.51640513 1352 P35270 SPR Sepiapterin reductase no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68.636 67.905 2 0.023411 78711 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 94.262 13.968 1268400000 637040000 0 128740000 25261000 31679000 33042000 31736000 31681000 26879000 50687000 56198000 66989000 39498000 45863000 63082000 30750 1352 28115 258550;258551;258552;258553;258554;258555;258556;258557;258558;258559;258560;258561;258562;258563 205293;205294;205295;205296;205297;205298;205299;205300;205301;205302 205302 10 LLSMAYSAVGK Oxidation (M) 1154.6005 0.60054547 2828 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog yes yes 0 1 0 By MS/MS 10 0 1 1 47.588 47.645 2 0.036724 53825 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 52.579 23.43 4944900 0 0 0 0 0 4944900 0 0 0 0 0 0 0 0 0 30751 2828 28116 258564 205303 205303 0 LLSMAYSAVGK Unmodified 1138.6056 0.60563084 2828 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 65.989 64.379 2 0.00095336 85713 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.111 49.864 135190000 73262000 30616000 0 0 3083600 0 0 0 0 5158700 4587000 5104800 0 4140800 9238900 30752 2828 28116 258565;258566;258567;258568;258569;258570;258571;258572 205304;205305;205306;205307 205306 4 LLSMPGAQGAAAAGSEPPPATTSPEGQPK Unmodified 2717.333 0.3330444 3912 Q96KQ7 EHMT2 Histone-lysine N-methyltransferase EHMT2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.47 69.543 3 0.002844 79559 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 22.888 15.899 64920000 0 0 0 3869500 2879300 3931500 4185000 5248400 3765400 5373700 6487900 8548800 5106000 4306300 11218000 30753 3912 28117 258573;258574;258575;258576;258577;258578;258579;258580;258581;258582;258583;258584 205308;205309;205310;205311;205312 205311 5 LLSNDEVTIK Unmodified 1130.6183 0.61830402 3654 Q92734 TFG Protein TFG yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.21 3.75 4 1 9 1 3 1 1 1 1 1 1 1 1 1 1 52.636 50.542 2 8.9536E-06 62130 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 130.75 73.467 7819500000 136270000 6937700000 53916000 16406000 28277000 0 0 0 0 63239000 102130000 130090000 50924000 88071000 212460000 30754 3654 28118 258585;258586;258587;258588;258589;258590;258591;258592;258593;258594;258595;258596;258597;258598 205313;205314;205315;205316;205317;205318;205319;205320;205321;205322;205323;205324;205325;205326 205318 13 LLSNEEEK Unmodified 960.47639 0.47639081 234 O14976 GAK Cyclin-G-associated kinase yes yes 0 0 0 By MS/MS 10 0 1 1 20.092 20.711 2 0.013529 20459 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.138 13.157 7561700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7561700 30755 234 28119 258599 205327 205327 1 LLSNMEAQHNDLEFK Unmodified 1787.8512 0.85123386 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 62.795 63.111 3 0.012655 71955 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 27.734 22.679 14165000 0 0 0 0 0 0 0 0 3504000 0 0 10661000 0 0 0 30756 2291 28120 258600;258601 205328 205328 1 LLSNTVMPR Oxidation (M) 1045.559 0.559015 1340 P35221 CTNNA1 Catenin alpha-1 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By matching 10 0 6 2 1 1 1 1 34.631 34.909 2 0.0042076 38266 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 75.213 28.131 80687000 0 0 0 0 0 22519000 6363700 0 0 15835000 0 24448000 0 0 11522000 30757 1340 28121 258602;258603;258604;258605;258606;258607 205329;205330;205331;205332 205331 2029 2 LLSNTVMPR Unmodified 1029.5641 0.56410038 1340 P35221 CTNNA1 Catenin alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 50.893 51.044 2 3.2492E-05 58715 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 151.27 84.587 481510000 0 0 0 27470000 25210000 49051000 32341000 28614000 23140000 42095000 58611000 58586000 36837000 37960000 61588000 30758 1340 28121 258608;258609;258610;258611;258612;258613;258614;258615;258616;258617;258618;258619 205333;205334;205335;205336;205337;205338;205339;205340;205341;205342;205343;205344;205345;205346;205347;205348;205349 205347 17 LLSPILAR Unmodified 881.56984 0.56983769 3893 Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.976 68.057 2 0.018051 78694 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 64.757 28.572 123840000 0 0 0 5019500 4936600 10898000 6712000 7548100 8615800 13815000 11337000 15499000 8362100 10900000 20202000 30759 3893 28122 258620;258621;258622;258623;258624;258625;258626;258627;258628;258629;258630;258631 205350;205351;205352;205353;205354;205355;205356 205356 7 LLSPLVK Unmodified 768.51093 0.51092582 4483 Q9HAB8 PPCS Phosphopantothenate--cysteine ligase yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 64.921 57.82 2 0.024243 73656 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.98 11.396 315740000 179690000 136060000 0 0 0 0 0 0 0 0 0 0 0 0 0 30760 4483 28123 258632;258633 205357;205358 205357 2 LLSPQMSGEEEDSDLAAK Unmodified 1918.883 0.8829875 1469 P42858 HTT Huntingtin yes yes 0 0 0 By MS/MS 2 0 1 1 65.339 59.422 2 5.6716E-09 76058 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.17 119.43 63727000 0 63727000 0 0 0 0 0 0 0 0 0 0 0 0 0 30761 1469 28124 258634 205359;205360 205360 2 LLSPQMSGEEEDSDLAAK Oxidation (M) 1934.8779 0.87790212 1469 P42858 HTT Huntingtin yes yes 0 1 0 By MS/MS 2 0 1 1 54.035 48.229 2 1.8197E-17 62516 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.19 90.654 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30762 1469 28124 258635 205361 205361 2307 1 LLSPQQPALQR Unmodified 1249.7143 0.71427009 2450 Q14814 MEF2D Myocyte-specific enhancer factor 2D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 50.074 50.228 2 3.1904E-15 56510 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 159.37 107.51 823610000 0 0 0 43104000 33607000 62756000 55925000 59631000 52497000 69150000 95015000 93554000 86202000 66983000 105190000 30763 2450 28125 258636;258637;258638;258639;258640;258641;258642;258643;258644;258645;258646;258647 205362;205363;205364;205365;205366;205367;205368;205369;205370;205371;205372;205373;205374;205375;205376;205377;205378;205379;205380;205381;205382 205373 21 LLSPRPSLLTPTGDPR Unmodified 1718.9679 0.9679186 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.387 69.464 3 0.0031172 79066 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 53.328 41.183 138980000 0 0 0 5152700 5535500 13406000 8335700 9270200 9756200 12022000 10329000 18134000 12237000 12108000 22692000 30764 5262 28126 258648;258649;258650;258651;258652;258653;258654;258655;258656;258657;258658;258659 205383;205384;205385 205384 0 LLSPSHVVQFR Unmodified 1281.7194 0.71935547 2764 Q5SY16 NOL9 Polynucleotide 5'-hydroxyl-kinase NOL9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 62.195 62.288 3 0.0016889 70202 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.259 40.45 53560000 0 0 0 2048400 2480000 4434600 2281800 3476200 0 5162700 3656400 6587500 6030900 4333000 13069000 30765 2764 28127 258660;258661;258662;258663;258664;258665;258666;258667;258668;258669;258670 205386;205387;205388;205389;205390;205391 205387 6 LLSPSILK Unmodified 869.5586 0.5586043 671 O95602 POLR1A DNA-directed RNA polymerase I subunit RPA1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 69.197 67.864 2 0.022229 87902 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.753 28.966 53646000 12846000 13406000 2952300 0 0 4086400 3557200 2420000 0 2758300 0 2691100 3006600 2001500 3921200 30766 671 28128 258671;258672;258673;258674;258675;258676;258677;258678;258679;258680;258681 205392;205393;205394;205395 205393 4 LLSPSNEK Unmodified 886.476 0.47599688 2439 Q14694 USP10 Ubiquitin carboxyl-terminal hydrolase 10 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 22.364 17.974 2 0.007878 23703 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.46 46.069 327220000 15413000 311810000 0 0 0 0 0 0 0 0 0 0 0 0 0 30767 2439 28129 258682;258683 205396 205396 1 LLSPVVPQISAPQSNK Unmodified 1676.9461 0.94612052 3311 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.89 2.72 3 1 24 2 2 2 2 2 2 2 2 2 2 2 2 2 2 78.477 77.658 2;3 7.9216E-20 90293 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 127.17 109.74 881950000 38636000 51612000 0 37407000 53583000 65841000 55522000 68904000 44027000 85380000 68599000 84064000 66260000 63225000 98887000 30768 3311 28130 258684;258685;258686;258687;258688;258689;258690;258691;258692;258693;258694;258695;258696;258697;258698;258699;258700;258701;258702;258703;258704;258705;258706;258707;258708;258709;258710;258711 205397;205398;205399;205400;205401;205402;205403;205404;205405;205406;205407;205408;205409;205410;205411;205412;205413;205414;205415;205416;205417;205418;205419;205420;205421;205422;205423;205424 205417 19 LLSPYSPQTQETDSAVQK Unmodified 1990.9848 0.98475045 4808 Q9P265 DIP2B Disco-interacting protein 2 homolog B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.24 2 1 10 3 1 1 1 1 1 1 1 1 1 1 57.651 56.463 2;3 3.6006E-58 70992 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 187.11 176.56 297390000 0 223260000 0 3010900 4471100 9285800 4521900 0 4782200 0 11920000 13629000 6539000 7602900 8371300 30769 4808 28131 258712;258713;258714;258715;258716;258717;258718;258719;258720;258721;258722;258723;258724 205425;205426;205427;205428;205429;205430;205431;205432;205433;205434;205435;205436;205437 205427 12 LLSQDFVQIMEDIILTLPK Unmodified 2215.2174 0.21739292 1199 P26196 DDX6 Probable ATP-dependent RNA helicase DDX6 yes yes 0 0 0 By MS/MS 3 0 1 1 107.22 103.55 3 0.0019866 124520 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 31.514 28.417 909890 0 909890 0 0 0 0 0 0 0 0 0 0 0 0 0 30770 1199 28132 258725 205438 205438 1 LLSQEPSNGISSDPTVFLDR Unmodified 2174.0855 0.085527128 5238 Q9Y5L0 TNPO3 Transportin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 82.654 82.761 2 3.4849E-07 95791 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 89.013 69.955 33625000 0 0 0 0 2109300 4999400 2528600 2918800 1800400 5325000 3584100 4314300 0 0 6044600 30771 5238 28133 258726;258727;258728;258729;258730;258731;258732;258733;258734 205439;205440;205441;205442;205443;205444;205445;205446 205439 8 LLSQGMTEEEEDK Unmodified 1507.6712 0.67120381 4024 Q99570 PIK3R4 Phosphoinositide 3-kinase regulatory subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.7 3.52 2 1 7 1 2 1 1 1 1 1 1 1 39.18 37.468 2 6.256E-06 47441 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.53 88.631 85323000 0 63971000 0 0 0 0 0 0 0 5266100 0 0 6093100 0 9992700 30772 4024 28134 258735;258736;258737;258738;258739;258740;258741;258742;258743;258744 205447;205448;205449;205450;205451;205452;205453;205454;205455 205448 9 LLSQGMTEEEEDK Oxidation (M) 1523.6661 0.66611843 4024 Q99570 PIK3R4 Phosphoinositide 3-kinase regulatory subunit 4 yes yes 0 1 0 By MS/MS 2.33 0.471 2 1 3 27.276 23.015 2 0.0018551 30828 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.344 78.699 26332000 0 26332000 0 0 0 0 0 0 0 0 0 0 0 0 0 30773 4024 28134 258745;258746;258747 205456;205457 205457 5528 2 LLSQQELVPELENTIK Unmodified 1853.0146 0.014594017 3242 Q8IWJ2 GCC2 GRIP and coiled-coil domain-containing protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 91.986 87.075 3 0.00030939 108106 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 53.008 41.24 74276000 0 74276000 0 0 0 0 0 0 0 0 0 0 0 0 0 30774 3242 28135 258748 205458 205458 1 LLSQVVRPQESR Unmodified 1410.7943 0.79431133 2770 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 40.23 40.348 3 0.0093978 44766 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 43.991 17.867 49674000 0 0 0 4941900 4961500 6939400 5202200 3030500 4850300 5771300 0 6919900 0 0 7056900 30775 2770 28136 258749;258750;258751;258752;258753;258754;258755;258756;258757 205459;205460;205461;205462;205463;205464;205465;205466 205460 8 LLSSDRNPPIDDLIK Unmodified 1694.9203 0.9202997 163;173 O00505;O00629 KPNA3;KPNA4 Importin subunit alpha-4;Importin subunit alpha-3 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.1 3.37 6 1 22 3 2 2 2 1 2 1 2 2 2 2 2 2 2 2 76.564 75.423 2;3 1.0071E-56 92714 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 153.38 110.1 1582300000 136320000 512350000 196470000 21110000 22377000 69371000 29673000 46869000 40067000 76689000 65921000 72462000 53367000 67253000 171980000 30776 163;173 28137 258758;258759;258760;258761;258762;258763;258764;258765;258766;258767;258768;258769;258770;258771;258772;258773;258774;258775;258776;258777;258778;258779;258780;258781;258782;258783;258784;258785;258786 205467;205468;205469;205470;205471;205472;205473;205474;205475;205476;205477;205478;205479;205480;205481;205482;205483;205484;205485;205486;205487;205488;205489;205490;205491;205492 205484 25 LLSSGFEIDTPDK Unmodified 1420.7086 0.70857559 3368 Q8N8A2 ANKRD44 Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B yes yes 0 0 0 By MS/MS 2 0 1 1 77.64 72.865 2 0.0039442 90857 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.701 38.578 23299000 0 23299000 0 0 0 0 0 0 0 0 0 0 0 0 0 30777 3368 28138 258787 205493 205493 1 LLSSLGGFK Unmodified 920.53312 0.53311783 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 65.964 66.023 2 0.0067484 76553 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 74.255 24.231 261550000 0 0 0 18248000 22496000 36951000 22091000 0 17676000 0 28220000 37337000 31267000 0 47267000 30778 3641 28139 258788;258789;258790;258791;258792;258793;258794;258795;258796 205494;205495;205496;205497;205498;205499;205500 205499 2 LLSSNEDDANILSSPTDR Unmodified 1945.9229 0.92287848 500 O75448 MED24 Mediator of RNA polymerase II transcription subunit 24 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.873 66.956 2 1.164E-33 76685 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 124.3 106.49 51113000 0 0 0 2342500 3081000 4545300 3879000 3383500 2637900 4833300 5177700 6497700 3793800 4923200 6017700 30779 500 28140 258797;258798;258799;258800;258801;258802;258803;258804;258805;258806;258807;258808 205501;205502;205503;205504;205505;205506;205507;205508;205509;205510;205511;205512 205510 12 LLSSSETK Unmodified 863.46001 0.46001246 2272 Q13330 MTA1 Metastasis-associated protein MTA1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.942 12.119 2 0.035396 11389 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 96.19 40.164 57436000 0 0 0 3365600 0 5108600 5871000 4201300 3897300 6321200 5388800 5599900 6511500 4367100 6803900 30780 2272 28141 258809;258810;258811;258812;258813;258814;258815;258816;258817;258818;258819 205513;205514 205513 0 LLSSSLTADCSLR Unmodified 1421.7184 0.71842877 2448 Q147X3 NAA30 N-alpha-acetyltransferase 30 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 63.992 63.996 2 1.0162E-12 73206 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 161.67 150.52 198060000 0 0 0 3880100 9870000 10637000 0 2118900 2798800 38026000 57585000 73142000 0 0 0 30781 2448 28142 258820;258821;258822;258823;258824;258825;258826;258827 205515;205516;205517;205518;205519;205520;205521 205517 7 LLSSSLTADCSLRSPSGR Unmodified 1905.9578 0.95782419 2448 Q147X3 NAA30 N-alpha-acetyltransferase 30 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 58.735 59.085 3 8.0281E-06 67252 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 73.707 46.678 24899000 0 0 0 0 0 0 0 0 0 6970500 7376800 10552000 0 0 0 30782 2448 28143 258828;258829;258830 205522;205523;205524;205525 205524 4 LLSSYLQK Unmodified 950.54368 0.54368251 1170 P23919 DTYMK Thymidylate kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.12 3 13 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 53.489 52.52 2 0.0050217 58242 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 114.72 45.545 935630000 135350000 140020000 18385000 34524000 34236000 67168000 57976000 42279000 36178000 67524000 53333000 50918000 53180000 46267000 98295000 30783 1170 28144 258831;258832;258833;258834;258835;258836;258837;258838;258839;258840;258841;258842;258843;258844;258845;258846 205526;205527;205528;205529;205530;205531;205532;205533;205534;205535;205536;205537;205538;205539;205540;205541 205537 15 LLSTDPVAAK Unmodified 1013.5757 0.57571092 2178 Q10567 AP1B1 AP-1 complex subunit beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.625 41.802 2 0.0099821 45332 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 56.81 0.26333 475230000 0 0 0 26712000 19616000 51346000 30177000 24855000 20079000 49379000 51195000 53449000 42183000 37181000 69054000 30784 2178 28145 258847;258848;258849;258850;258851;258852;258853;258854;258855;258856;258857;258858 205542;205543 205542 2 LLSTDPVTAK Unmodified 1043.5863 0.58627561 1937 P63010 AP2B1 AP-2 complex subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.657 41.833 2 0.044758 46885 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 38.567 5.7267 532270000 0 0 0 28783000 24196000 50102000 33744000 36255000 30445000 54412000 54552000 70708000 48409000 40285000 60379000 30785 1937 28146 258859;258860;258861;258862;258863;258864;258865;258866;258867;258868;258869;258870 205544 205544 1 LLSTFPR Unmodified 832.48069 0.48068833 5037 Q9UNN5 FAF1 FAS-associated factor 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.788 52.931 2 0.048847 60575 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 64.803 20.192 371180000 0 0 0 15757000 12592000 49929000 17289000 13491000 19246000 30113000 55689000 39200000 41174000 25336000 51367000 30786 5037 28147 258871;258872;258873;258874;258875;258876;258877;258878;258879;258880;258881;258882 205545 205545 1 LLSTGDDFGK Unmodified 1051.5186 0.51858998 152 O00423 EML1 Echinoderm microtubule-associated protein-like 1 yes yes 0 0 0 By MS/MS 2 0 1 1 48.927 43.28 2 0.0052752 56327 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.136 48.49 90304000 0 90304000 0 0 0 0 0 0 0 0 0 0 0 0 0 30787 152 28148 258883 205546 205546 1 LLSTGFSR Unmodified 879.48142 0.48141661 2963 Q6QEF8 CORO6 Coronin-6 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 47.65 47.654 2 0.030584 54775 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 55.441 9.0706 24502000 0 0 0 7569400 634370 0 1908800 4409900 0 2517100 4431800 0 3030500 0 0 30788 2963 28149 258884;258885;258886;258887;258888;258889;258890 205547 205547 1 LLSTGPTEPWSIR Unmodified 1455.7722 0.7721789 4326 Q9H0E9 BRD8 Bromodomain-containing protein 8 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 14 2 1 1 1 1 1 1 1 1 1 1 2 77.668 77.703 2 0.00082789 89068 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 84.658 62.017 146940000 0 0 0 6550300 4855800 10670000 8086500 12066000 9004700 11507000 9190300 16512000 12677000 9790200 36032000 30789 4326 28150 258891;258892;258893;258894;258895;258896;258897;258898;258899;258900;258901;258902;258903;258904 205548;205549;205550;205551;205552;205553;205554;205555;205556 205556 8 LLSTSPALQGTPASR Unmodified 1497.8151 0.81510635 4833 Q9UBB6 NCDN Neurochondrin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 55.169 55.304 2 2.844E-14 61814 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.55 63.442 48714000 0 0 0 3596100 0 4637000 4639500 4609100 1775800 7998800 6766400 0 0 4845400 9845700 30790 4833 28151 258905;258906;258907;258908;258909;258910;258911;258912;258913;258914;258915 205557;205558;205559;205560;205561;205562;205563;205564;205565;205566;205567 205560 11 LLSTYLER Unmodified 993.5495 0.54949617 2184 Q12769 NUP160 Nuclear pore complex protein Nup160 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 58.607 58.812 2 0.0076415 67192 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 88.942 18.675 57807000 0 0 0 0 0 8603500 6584100 6124500 5202500 8964700 0 0 8698800 0 13629000 30791 2184 28152 258916;258917;258918;258919;258920;258921;258922 205568;205569;205570;205571;205572 205572 5 LLSVAEK Unmodified 758.4538 0.45380487 3835 Q96F86 EDC3 Enhancer of mRNA-decapping protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 30.104 30.341 2 0.025588 31439 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.462 17.175 97919000 0 0 0 0 3813900 11679000 6088500 5565500 5623500 11101000 10851000 10402000 9612700 10113000 13068000 30792 3835 28153 258923;258924;258925;258926;258927;258928;258929;258930;258931;258932;258933 205573;205574;205575;205576;205577;205578 205575 6 LLSVEGSTLR Unmodified 1073.6081 0.60807369 121 O00159 MYO1C Unconventional myosin-Ic yes yes 0 0 0 By MS/MS 10 0 1 1 54.47 55.095 2 0.030743 62187 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.859 9.2974 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30793 121 28154 258934 205579 205579 1 LLSVNIR Unmodified 813.50724 0.50723743 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 56.29 56.592 2 0.02335 64190 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 89.903 0 229180000 0 0 0 0 0 20095000 0 0 11353000 23376000 27647000 39335000 16545000 22008000 68817000 30794 848 28155 258935;258936;258937;258938;258939;258940;258941;258942 205580;205581;205582;205583;205584 205581 5 LLSVQQDFTSGLK Unmodified 1434.7718 0.77184455 3824 Q96EV8 DTNBP1 Dysbindin yes yes 0 0 0 By MS/MS 10 0 1 1 77.194 77.382 2 0.029242 89311 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 65.627 45.84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30795 3824 28156 258943 205585 205585 1 LLSVTEDQK Unmodified 1031.5499 0.5498901 2823 Q5VW36 FOCAD Focadhesin yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 38.375 33.407 2 0.00099081 43451 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 142.19 56.377 147990000 0 147990000 0 0 0 0 0 0 0 0 0 0 0 0 0 30796 2823 28157 258944;258945 205586;205587 205587 2 LLSVVPVPEGYSVK Unmodified 1485.8443 0.84428121 4297 Q9GZN8 C20orf27 UPF0687 protein C20orf27 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 83.28 82.163 2 0.00052599 95346 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 84.658 70.452 674390000 19016000 516310000 11141000 2935400 3670800 14803000 5832200 6171400 4165900 12498000 12405000 12558000 6723600 14812000 31338000 30797 4297 28158 258946;258947;258948;258949;258950;258951;258952;258953;258954;258955;258956;258957;258958;258959;258960;258961 205588;205589;205590;205591;205592;205593;205594;205595;205596;205597;205598;205599;205600;205601;205602;205603 205596 15 LLSYSPESLQYMVK Unmodified 1656.8433 0.84329493 2996 Q6YHU6 THADA Thyroid adenoma-associated protein yes yes 0 0 0 By MS/MS 2 0 1 1 88.802 83.96 2 0.00082545 104347 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.258 66.66 34278000 0 34278000 0 0 0 0 0 0 0 0 0 0 0 0 0 30798 2996 28159 258962 205604 205604 1 LLTAAEQR Unmodified 900.50288 0.50288033 4981 Q9UKZ1 CNOT11 CCR4-NOT transcription complex subunit 11 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 21.901 22.24 2 0.035078 23240 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 52.716 1.3703 6336700 0 0 0 0 0 0 0 0 0 0 0 0 3350300 2986400 0 30799 4981 28160 258963;258964 205605 205605 1 LLTAEADK Unmodified 859.4651 0.46509784 349 O43660 PLRG1 Pleiotropic regulator 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching 10 0 7 1 1 1 1 1 1 1 21.233 21.466 2 0.012605 22054 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 74.255 21.572 131260000 0 0 0 18771000 0 0 16053000 0 11234000 18024000 22345000 27023000 17813000 0 0 30800 349 28161 258965;258966;258967;258968;258969;258970;258971 205606;205607 205606 2 LLTAGTIEEK Unmodified 1073.5968 0.5968403 2097 Q03468 ERCC6 DNA excision repair protein ERCC-6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.064 45.235 2 0.00049971 51362 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 124.92 48.701 248300000 0 0 0 16738000 17373000 25403000 19258000 11599000 13135000 22887000 25958000 23776000 24231000 21167000 26780000 30801 2097 28162 258972;258973;258974;258975;258976;258977;258978;258979;258980;258981;258982;258983 205608;205609;205610;205611;205612;205613;205614;205615;205616;205617;205618;205619;205620;205621;205622;205623 205623 14 LLTATNLVTLPNSR Unmodified 1511.8671 0.86714192 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.756 80.816 2 3.7017E-17 93430 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 124.1 75.82 161010000 0 0 0 5561300 8447100 15006000 9765300 10141000 5890700 17288000 14969000 17668000 13258000 13416000 29602000 30802 619 28163 258984;258985;258986;258987;258988;258989;258990;258991;258992;258993;258994;258995 205624;205625;205626;205627;205628;205629;205630;205631;205632;205633;205634;205635 205624 12 LLTDDGNK Unmodified 874.43961 0.43961137 2252 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.95 3.44 4 1 14 1 3 1 1 1 1 1 1 1 1 2 2 1 1 1 14.536 13.808 2 0.0043449 13802 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 111.04 48.32 1909500000 66668000 1301200000 13425000 29171000 35599000 45289000 20256000 19331000 13048000 72203000 104440000 92873000 23355000 20292000 52367000 30803 2252 28164 258996;258997;258998;258999;259000;259001;259002;259003;259004;259005;259006;259007;259008;259009;259010;259011;259012;259013;259014 205636;205637;205638;205639;205640;205641;205642;205643;205644;205645;205646;205647;205648;205649;205650 205650 11 LLTDSSTDALEK Unmodified 1291.6507 0.65072636 3078 Q7Z333 SETX Probable helicase senataxin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 2 1 1 47.762 47.93 2 0.0022036 53400 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.143 46.67 60775000 0 0 0 3639200 4890900 6886800 5992200 4782600 0 0 17758000 9059200 0 0 7765900 30804 3078 28165 259015;259016;259017;259018;259019;259020;259021;259022;259023;259024 205651;205652;205653;205654;205655;205656;205657 205656 7 LLTDVQLMK Unmodified 1059.5998 0.59981719 2041 Q00613 HSF1 Heat shock factor protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 72.149 71.841 2 0.0036746 82407 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 89.296 43.28 288200000 0 181650000 0 4612100 5815300 8253400 7218200 6763600 6057400 10017000 10103000 10640000 7341400 8040000 21683000 30805 2041 28166 259025;259026;259027;259028;259029;259030;259031;259032;259033;259034;259035;259036;259037 205658;205659;205660;205661;205662;205663;205664;205665;205666;205667;205668 205667 11 LLTDVQLMK Oxidation (M) 1075.5947 0.59473181 2041 Q00613 HSF1 Heat shock factor protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 56.979 56.859 2 0.017395 65330 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 49.833 23.661 85937000 0 0 0 13937000 9972000 15037000 17826000 0 12737000 16428000 0 0 0 0 0 30806 2041 28166 259038;259039;259040;259041;259042;259043 205669;205670;205671;205672 205672 3303 2 LLTECPPMMDTEYTK Oxidation (M) 1843.8042 0.80420859 1754 P55060 CSE1L Exportin-2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.26 3.76 7 1 15 2 4 2 2 1 2 1 1 1 2 1 1 1 2 65.49 63.396 2 4.4318E-50 81316 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 164.04 152.17 666240000 7953800 588380000 3133000 3437800 1762200 13342000 2717600 2344900 3268800 9607500 7215500 7104600 0 5970100 10005000 30807 1754 28167 259044;259045;259046;259047;259048;259049;259050;259051;259052;259053;259054;259055;259056;259057;259058;259059;259060;259061;259062;259063;259064;259065;259066 205673;205674;205675;205676;205677;205678;205679;205680;205681;205682;205683;205684;205685 205679 2860;2861 13 LLTECPPMMDTEYTK Unmodified 1827.8093 0.80929397 1754 P55060 CSE1L Exportin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 74.706 73.768 2 2.8422E-41 85090 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 160.15 153.49 1537000000 11175000 1425200000 0 0 0 12442000 3673100 5602400 3190800 9511200 11449000 9632600 5444700 10624000 29041000 30808 1754 28167 259067;259068;259069;259070;259071;259072;259073;259074;259075;259076;259077;259078 205686;205687;205688;205689;205690;205691;205692;205693;205694;205695;205696;205697;205698 205689 13 LLTECPPMMDTEYTK 2 Oxidation (M) 1859.7991 0.79912321 1754 P55060 CSE1L Exportin-2 yes yes 0 2 0 By MS/MS 2.5 0.5 1 1 2 53.927 48.58 2 0.0012756 62713 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.085 65.478 104610000 0 104610000 0 0 0 0 0 0 0 0 0 0 0 0 0 30809 1754 28167 259079;259080 205699 205699 2860;2861 1 LLTEDSENQR Unmodified 1203.5731 0.57314474 175 O00716 E2F3 Transcription factor E2F3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 20.893 21.042 2 0.005999 22104 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.692 53.639 42572000 0 0 0 3241300 2675400 2610700 4730000 3126700 2633300 4494200 5927600 0 5794000 0 7338800 30810 175 28168 259081;259082;259083;259084;259085;259086;259087;259088;259089;259090 205700;205701;205702;205703;205704;205705;205706;205707 205700 8 LLTEFNK Unmodified 863.47527 0.4752686 1251;1545 P29508;P48594 SERPINB3;SERPINB4 Serpin B3;Serpin B4 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 43.93 44.075 2 0.015564 49650 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 117.7 55.702 2880400000 0 0 0 1989700000 104320000 94682000 105480000 0 50573000 128260000 0 180110000 80032000 67352000 79916000 30811 1251;1545 28169 259091;259092;259093;259094;259095;259096;259097;259098;259099;259100 205708;205709;205710;205711;205712;205713;205714;205715;205716;205717;205718;205719;205720 205708 12 LLTEIHGGAGGPSGR Unmodified 1420.7423 0.74227576 2632 Q16763 UBE2S Ubiquitin-conjugating enzyme E2 S yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 2 2 2 2 1 2 2 2 1 1 1 1 37.083 37.192 2;3 8.6053E-11 40495 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 97.734 57.732 394100000 0 0 0 24291000 26066000 50248000 39501000 4278900 30158000 49196000 63175000 10548000 44950000 42383000 9307800 30812 2632 28170 259101;259102;259103;259104;259105;259106;259107;259108;259109;259110;259111;259112;259113;259114;259115;259116;259117;259118;259119 205721;205722;205723;205724;205725;205726;205727;205728;205729;205730;205731;205732;205733;205734;205735;205736;205737;205738;205739;205740 205737 20 LLTEMVMSHSQGGAAAGSSEDLMK 2 Oxidation (M) 2481.1186 0.11855987 4950 Q9UJY5 GGA1 ADP-ribosylation factor-binding protein GGA1 yes yes 0 2 0 By MS/MS 2 0 1 1 66.386 58.092 3 9.6454E-12 77987 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.797 72.699 17550000 17550000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30813 4950 28171 259120 205741 205741 6294;6295 1 LLTEMVMSHSQGGAAAGSSEDLMK Oxidation (M) 2465.1236 0.12364525 4950 Q9UJY5 GGA1 ADP-ribosylation factor-binding protein GGA1 yes yes 0 1 0 By MS/MS 2 0 1 1 75.523 67.393 3 9.9203E-12 88910 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.417 73.179 38337000 38337000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30814 4950 28171 259121 205742 205742 6294;6295 1 LLTETEDWLYEEGEDQAK Unmodified 2167.9797 0.97972465 3633 Q92598 HSPH1 Heat shock protein 105 kDa yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 1 4 1 85.375 80.944 2;3 4.7704E-06 101132 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.992 79.07 87331000 9600700 75405000 2325200 0 0 0 0 0 0 0 0 0 0 0 0 30815 3633 28172 259122;259123;259124;259125;259126;259127 205743;205744;205745;205746 205743 4 LLTEVDFNK Unmodified 1077.5706 0.57062555 1732 P54132 BLM Bloom syndrome protein yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 62.181 62.163 2 0.0197 70761 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 53.753 16.025 12541000 0 0 0 0 2320000 6544200 0 0 0 0 0 3677200 0 0 0 30816 1732 28173 259128;259129;259130 205747 205747 1 LLTFMGMAVENK 2 Oxidation (M) 1384.6731 0.67305848 3046 Q7L2H7 EIF3M Eukaryotic translation initiation factor 3 subunit M yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 2 2 1 2 2 1 1 1 2 1 2 2 60.205 60.292 2 0.0001102 68934 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 81.771 64.777 145640000 0 0 0 11372000 9934200 9767000 18813000 12500000 5882800 8076000 8166700 19919000 10716000 13479000 17018000 30817 3046 28174 259131;259132;259133;259134;259135;259136;259137;259138;259139;259140;259141;259142;259143;259144;259145;259146;259147;259148;259149 205748;205749;205750;205751;205752;205753;205754;205755;205756;205757;205758;205759;205760;205761;205762;205763;205764 205760 4671;4672 10 LLTFMGMAVENK Unmodified 1352.6832 0.68322924 3046 Q7L2H7 EIF3M Eukaryotic translation initiation factor 3 subunit M yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 84.654 84.826 2 3.9447E-05 97920 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.38 95.619 35424000 0 0 0 0 0 0 0 0 0 0 8394900 9166500 0 0 17863000 30818 3046 28174 259150;259151;259152 205765;205766;205767;205768;205769 205766 5 LLTFMGMAVENK Oxidation (M) 1368.6781 0.67814386 3046 Q7L2H7 EIF3M Eukaryotic translation initiation factor 3 subunit M yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 75.957 75.904 2 0.030092 87689 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 51.762 35.251 48224000 0 0 0 0 14472000 0 0 0 0 0 0 33753000 0 0 0 30819 3046 28174 259153;259154 205770;205771 205770 4671;4672 0 LLTGELLPTDGMIR Oxidation (M) 1543.828 0.82797922 4879 Q9UG63 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.162 81.222 2 0.00011156 93687 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 81.865 63.085 135810000 0 0 0 4157200 8462500 10679000 10127000 7254700 7310300 16338000 13352000 16354000 10341000 12333000 19102000 30820 4879 28175 259155;259156;259157;259158;259159;259160;259161;259162;259163;259164;259165;259166 205772;205773;205774;205775;205776;205777;205778;205779;205780;205781;205782;205783 205774 6229 12 LLTGELLPTDGMIR Unmodified 1527.8331 0.8330646 4879 Q9UG63 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 86.27 86.429 2 0.0032419 99359 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 60.434 42.166 9072500 0 0 0 0 0 0 0 0 0 0 1698200 0 0 1267300 6107000 30821 4879 28175 259167;259168;259169 205784;205785 205785 2 LLTGELLPTDGMIRK Unmodified 1655.928 0.92802762 4879 Q9UG63 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 79.284 79.436 3 0.00099414 91334 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.207 38.479 74097000 0 0 0 0 0 0 0 0 0 0 0 9514500 7482000 8799600 48301000 30822 4879 28176 259170;259171;259172;259173;259174;259175 205786;205787;205788;205789 205787 4 LLTGELLPTDGMIRK Oxidation (M) 1671.9229 0.92294224 4879 Q9UG63 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 2 1 1 1 1 1 74.147 73.428 2;3 3.2583E-05 83955 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.344 60.082 375620000 22691000 0 0 0 0 0 26523000 35432000 43275000 55022000 38823000 59687000 0 28064000 66106000 30823 4879 28176 259176;259177;259178;259179;259180;259181;259182;259183;259184;259185 205790;205791;205792;205793;205794;205795;205796 205791 6229 5 LLTGPVVRGEGASR Unmodified 1410.7943 0.79431133 4814 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 40.951 41.004 3 0.019151 45727 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 30.998 8.7662 51999000 0 0 0 5376000 5144500 4286600 6504100 0 4598800 7112800 7490700 0 7812000 3673900 0 30824 4814 28177 259186;259187;259188;259189;259190;259191;259192;259193;259194 205797;205798 205798 2 LLTGVEYVVGRK Unmodified 1332.7765 0.776536 448 O60934 NBN Nibrin yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 65.227 65.45 3 0.010906 74034 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.236 28.131 40684000 0 0 0 0 0 6011500 0 3443100 3684900 3627800 0 5725500 3462100 4336300 10392000 30825 448 28178 259195;259196;259197;259198;259199;259200;259201;259202 205799;205800 205799 2 LLTHNLLSSHVR Unmodified 1388.7888 0.78883202 4920 Q9UI30 TRMT112 Multifunctional methyltransferase subunit TRM112-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 3 3 1 2 2 1 2 2 3 67.643 67.87 2;3 0.00014601 53142 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.03 53.491 281450000 0 0 0 0 0 53634000 0 17873000 16127000 18352000 24303000 26933000 28718000 14697000 80816000 30826 4920 28179 259203;259204;259205;259206;259207;259208;259209;259210;259211;259212;259213;259214;259215;259216;259217;259218;259219;259220;259221 205801;205802;205803;205804;205805;205806;205807;205808;205809;205810;205811;205812;205813;205814;205815;205816 205805 16 LLTIGDANGEIQR Unmodified 1398.7467 0.74669243 3190 Q86X55 CARM1 Histone-arginine methyltransferase CARM1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.847 63.938 2 0.00019361 72248 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.344 49.153 299450000 0 0 0 12854000 12043000 27278000 16585000 21738000 13332000 31611000 30585000 31792000 23479000 29419000 48736000 30827 3190 28180 259222;259223;259224;259225;259226;259227;259228;259229;259230;259231;259232;259233 205817;205818;205819;205820;205821;205822;205823;205824;205825;205826;205827 205820 11 LLTLFNPDLANNYK Unmodified 1634.8668 0.86680757 5192 Q9Y4B6 VPRBP Protein VPRBP yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 3 9 1 1 1 1 1 1 1 1 1 1 1 1 89.17 87.983 2 0.001089 111089 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 115.78 100.15 54329000 15770000 14498000 1151200 0 0 2585300 1357700 1909000 2199000 4325300 3320100 3641700 1327300 2244500 0 30828 5192 28181 259234;259235;259236;259237;259238;259239;259240;259241;259242;259243;259244;259245 205828;205829;205830;205831;205832;205833;205834;205835;205836;205837 205832 10 LLTLPNGER Unmodified 1011.5713 0.57129425 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 53.569 53.711 2 0.0031269 60682 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 91.064 48.59 338400000 0 0 0 15781000 20761000 31413000 25342000 22847000 18434000 37230000 30500000 42786000 23984000 26248000 43078000 30829 2392 28182 259246;259247;259248;259249;259250;259251;259252;259253;259254;259255;259256;259257 205838;205839;205840;205841;205842;205843;205844;205845;205846;205847;205848;205849;205850;205851;205852;205853;205854;205855;205856;205857 205838 19 LLTMDPIK Unmodified 929.52559 0.52558961 1566 P49336 CDK8 Cyclin-dependent kinase 8 yes yes 0 0 0 By MS/MS By matching By MS/MS 7.33 3.77 1 2 1 1 1 66.962 65.292 2 0.012091 84223 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.19 27.149 52893000 0 45109000 0 0 0 0 0 0 0 0 0 0 2478100 0 5305800 30830 1566 28183 259258;259259;259260 205858;205859 205858 2 LLTMMPTEEERQK Oxidation (M) 1620.7851 0.78512813 5260 Q9Y613 FHOD1 FH1/FH2 domain-containing protein 1 yes yes 0 1 1 By MS/MS 2 0 1 1 46.435 42.583 3 0.013983 53614 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 45.79 35.659 9831600 0 0 9831600 0 0 0 0 0 0 0 0 0 0 0 0 30831 5260 28184 259261 205860 205860 6658 1 LLTMMPTEEERQK Unmodified 1604.7902 0.79021351 5260 Q9Y613 FHOD1 FH1/FH2 domain-containing protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 58.666 54.863 3 0.015237 68335 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 50.145 37.165 6772800 0 0 6772800 0 0 0 0 0 0 0 0 0 0 0 0 30832 5260 28184 259262 205861 205861 1 LLTPAEEVLTEEER Unmodified 1627.8305 0.83048164 4284 Q9C0B7 TANGO6 Transport and Golgi organization protein 6 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 78.501 78.747 2 0.004652 91014 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 60.49 47.913 9537500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9537500 30833 4284 28185 259263;259264;259265 205862;205863;205864 205862 3 LLTPTHSFLAR Unmodified 1254.7085 0.70845643 2398 Q14244 MAP7 Ensconsin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 2 2 1 2 62.211 62.304 2;3 0.00040633 70931 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 78.653 63.113 273850000 0 0 0 16286000 13544000 27810000 20930000 26045000 15481000 21270000 24998000 28028000 20998000 20982000 37478000 30834 2398 28186 259266;259267;259268;259269;259270;259271;259272;259273;259274;259275;259276;259277;259278;259279;259280;259281;259282;259283;259284;259285;259286;259287;259288 205865;205866;205867;205868;205869;205870;205871;205872;205873;205874;205875;205876;205877;205878;205879;205880 205868 15 LLTQEVTEK Unmodified 1059.5812 0.58119023 3146 Q86UD0 SAPCD2 Suppressor APC domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 35.355 35.646 2 0.01612 39287 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 56.81 31.916 28822000 0 0 0 0 2495200 0 3822400 3251400 0 0 3378700 6198300 4862400 0 4813100 30835 3146 28187 259289;259290;259291;259292;259293;259294;259295 205881;205882 205881 2 LLTQGFTNWNK Unmodified 1320.6826 0.68263561 389 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 72.993 73.066 2 2.1517E-05 83521 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 123.35 83.003 81356000 0 0 0 4984000 4431100 0 5294400 5377100 7515900 7052600 9367300 9437000 8220900 5793800 13882000 30836 389 28188 259296;259297;259298;259299;259300;259301;259302;259303;259304;259305;259306 205883;205884;205885;205886;205887;205888;205889;205890;205891;205892;205893;205894 205886 11 LLTQHENIK Unmodified 1094.6084 0.60840804 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 3 9 1 1 1 1 1 1 1 1 1 1 1 1 23.018 22.133 2 0.0016066 29259 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 134.81 107.68 620880000 293800000 152120000 82082000 0 4062400 13780000 6527900 0 0 10397000 13599000 10370000 7468800 11838000 14831000 30837 2047 28189 259307;259308;259309;259310;259311;259312;259313;259314;259315;259316;259317;259318 205895;205896;205897;205898;205899;205900;205901;205902;205903;205904;205905;205906 205903 12 LLTQYILNLGK Unmodified 1274.7598 0.7598233 128 O00203 AP3B1 AP-3 complex subunit beta-1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 94.934 88.437 2 0.004546 112287 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.239 58.732 10965000 3685000 7279900 0 0 0 0 0 0 0 0 0 0 0 0 0 30838 128 28190 259319;259320 205907;205908 205908 2 LLTSGYLQR Unmodified 1049.5869 0.58694431 3840 Q96FW1 OTUB1 Ubiquitin thioesterase OTUB1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.904 53.046 2 0.0035437 58798 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.874 48.504 438810000 0 0 0 10570000 6830500 53271000 10954000 9441700 15256000 49670000 59769000 36976000 43167000 33679000 109220000 30839 3840 28191 259321;259322;259323;259324;259325;259326;259327;259328;259329;259330;259331;259332 205909;205910;205911;205912;205913;205914;205915;205916;205917;205918 205912 10 LLTSHTGNTSNSEDILSSACYTVR Unmodified 2625.2341 0.23405863 2346 Q13835 PKP1 Plakophilin-1 yes yes 0 0 0 By MS/MS 10 0 1 1 72.089 71.486 3 0.00013722 82878 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 36.9 29.096 4721200 0 0 0 4721200 0 0 0 0 0 0 0 0 0 0 0 30840 2346 28192 259333 205919 205919 1 LLTSLLK Unmodified 786.52149 0.52149051 430 O60763 USO1 General vesicular transport factor p115 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 69.712 69.466 2 0.02333 78245 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.986 6.6269 233000000 0 77741000 0 0 0 18588000 10872000 12635000 7831300 20794000 14519000 15692000 14771000 13775000 25780000 30841 430 28193 259334;259335;259336;259337;259338;259339;259340;259341;259342;259343;259344 205920;205921;205922;205923;205924;205925 205922 6 LLTSLWEK Unmodified 988.55933 0.55933258 2823 Q5VW36 FOCAD Focadhesin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 74.878 74.974 2 0.006389 85564 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 101.28 50.581 65762000 0 0 0 4238800 0 8570200 0 6893000 8383600 10501000 6003700 5546700 4246900 3651200 7727000 30842 2823 28194 259345;259346;259347;259348;259349;259350;259351;259352;259353;259354 205926;205927;205928;205929;205930;205931;205932;205933;205934;205935 205932 10 LLTSSAVHK Unmodified 954.54983 0.54983053 5061 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 23.756 19.732 2 0.029335 24981 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 96.253 46.213 139180000 114960000 13077000 11141000 0 0 0 0 0 0 0 0 0 0 0 0 30843 5061 28195 259355;259356;259357 205936 205936 0 LLTSSAYR Unmodified 909.49198 0.4919813 2382 Q14161 GIT2 ARF GTPase-activating protein GIT2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 31.302 31.399 2 0.031953 34293 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 54.611 28.672 22503000 0 0 0 0 2846500 0 3772300 4693200 2370000 0 0 0 4477500 4343000 0 30844 2382 28196 259358;259359;259360;259361;259362;259363 205937;205938 205937 2 LLTSSLQK Unmodified 888.52803 0.52803245 3180 Q86W92 PPFIBP1 Liprin-beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.192 35.374 2 0.0057923 38888 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 117.93 38.48 1242400000 0 0 0 64479000 70116000 77002000 105620000 85771000 75025000 112440000 174150000 132510000 134950000 90474000 119850000 30845 3180 28197 259364;259365;259366;259367;259368;259369;259370;259371;259372;259373;259374;259375 205939;205940;205941;205942;205943;205944;205945;205946;205947;205948;205949;205950;205951;205952 205945 9 LLTSYGFIQCSER Unmodified 1572.7606 0.76062794 517 O75534 CSDE1 Cold shock domain-containing protein E1 yes yes 0 0 0 By matching By matching By MS/MS By matching 10 0 4 1 1 1 1 75.396 75.58 2 0.00082763 87247 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 69.721 48.348 17402000 0 0 0 0 0 0 1435800 0 0 0 4275400 8162100 0 3528800 0 30846 517 28198 259376;259377;259378;259379 205953 205953 1 LLTTGTIEEK Unmodified 1103.6074 0.60740498 5263 Q9Y620 RAD54B DNA repair and recombination protein RAD54B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.629 42.816 2 0.00053181 47985 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 133.57 87.856 172840000 0 0 0 13494000 12729000 0 17532000 22386000 12077000 16584000 20667000 22743000 12671000 7470800 14484000 30847 5263 28199 259380;259381;259382;259383;259384;259385;259386;259387;259388;259389;259390;259391 205954;205955;205956;205957;205958;205959;205960;205961;205962;205963;205964;205965;205966 205959 13 LLTVPFEK Unmodified 945.55352 0.55351892 641 O95336 PGLS 6-phosphogluconolactonase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.439 73.507 2 0.0044102 85002 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 112.17 74.038 260480000 0 0 0 14375000 11390000 33401000 11164000 11354000 9609900 28722000 26689000 30907000 15002000 22255000 45615000 30848 641 28200 259392;259393;259394;259395;259396;259397;259398;259399;259400;259401;259402;259403 205967;205968;205969;205970;205971;205972;205973;205974;205975;205976;205977 205977 11 LLTVPVETVLR Unmodified 1238.7598 0.7598233 2763 Q5SXM2 SNAPC4 snRNA-activating protein complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 84.597 84.686 2 0.0021553 98226 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 67.563 61.357 39716000 0 0 0 0 2699200 3751600 3495100 3338800 0 6756600 5043000 7334500 3571700 3725400 0 30849 2763 28201 259404;259405;259406;259407;259408;259409;259410;259411;259412 205978;205979;205980;205981;205982;205983;205984;205985;205986 205985 9 LLTVQHPLEESR Unmodified 1420.7674 0.76742787 2932 Q6P3W7 SCYL2 SCY1-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.231 47.397 3 0.00075264 52623 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.466 65.059 183160000 0 0 0 8677600 9076800 10923000 13544000 11471000 9428300 17918000 19012000 25084000 17606000 18083000 22338000 30850 2932 28202 259413;259414;259415;259416;259417;259418;259419;259420;259421;259422;259423;259424 205987;205988;205989;205990;205991;205992;205993;205994;205995;205996 205996 9 LLTWVIGTGSPR Unmodified 1298.7347 0.73467118 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching 10 0 7 1 1 1 1 1 1 1 83.305 83.318 2 0.017049 96465 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 50.284 29.382 55436000 0 0 0 2243800 1366800 8972700 4781700 6192900 0 0 10431000 21448000 0 0 0 30851 3641 28203 259425;259426;259427;259428;259429;259430;259431 205997;205998 205997 2 LLVATSVAAR Unmodified 999.60768 0.60767975 3041 Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 51.391 51.612 2 0.016645 57297 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 49.418 9.2151 421080000 0 0 0 0 18626000 35684000 27191000 40291000 23733000 45179000 51066000 57226000 34178000 35941000 51970000 30852 3041 28204 259432;259433;259434;259435;259436;259437;259438;259439;259440;259441;259442 205999;206000;206001;206002;206003;206004;206005;206006 206004 3 LLVATSVAARGLDVK Unmodified 1511.9035 0.90352742 3041 Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 0 0 1 By MS/MS 2 0 1 1 79.552 71.421 3 0.01319 93908 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 41.378 32.09 9091900 9091900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30853 3041 28205 259443 206007 206007 1 LLVDFPK Unmodified 830.49019 0.49019038 775 P04150 NR3C1 Glucocorticoid receptor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.241 73.306 2 0.032282 84229 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 73.039 10.325 624700000 0 0 0 30379000 35032000 47073000 42608000 49590000 35311000 58020000 66533000 71758000 61550000 57534000 69308000 30854 775 28206 259444;259445;259446;259447;259448;259449;259450;259451;259452;259453;259454;259455 206008;206009 206008 2 LLVDSNNPK Unmodified 998.53966 0.53965977 1179 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 29.011 28.349 2 0.020833 31189 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 52.786 42.712 196260000 0 137570000 0 4621000 3453200 6079100 4068600 5391800 3734200 7482800 7811300 0 8822800 7220100 0 30855 1179 28207 259456;259457;259458;259459;259460;259461;259462;259463;259464;259465;259466;259467 206010;206011;206012;206013;206014;206015 206015 6 LLVDVDESTLSPEEQK Unmodified 1800.8993 0.89928949 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.75 6 3 14 5 3 1 1 2 1 1 1 1 1 1 2 1 1 1 75.908 73.855 2;3 1.4917E-234 91502 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 265.72 240.1 3198300000 153550000 2100100000 7275700 25718000 66681000 69817000 52377000 59844000 57485000 94482000 101300000 117480000 61782000 83998000 146400000 30856 516 28208 259468;259469;259470;259471;259472;259473;259474;259475;259476;259477;259478;259479;259480;259481;259482;259483;259484;259485;259486;259487;259488;259489;259490 206016;206017;206018;206019;206020;206021;206022;206023;206024;206025;206026;206027;206028;206029;206030;206031;206032;206033;206034;206035;206036;206037;206038;206039;206040 206021 24 LLVEEIK Unmodified 842.51132 0.51131975 2895 Q6N069 NAA16 N-alpha-acetyltransferase 16, NatA auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By matching 8 3.46 3 9 1 1 1 1 1 1 1 1 1 1 1 1 56.07 54.619 2 0.029674 70154 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.407 8.3208 1626000000 2211400 30784000 4460400 43828000 93426000 71356000 129490000 142080000 106490000 247140000 307620000 447070000 0 0 0 30857 2895 28209 259491;259492;259493;259494;259495;259496;259497;259498;259499;259500;259501;259502 206041;206042 206042 2 LLVGAYDADVDIRDYSGK Unmodified 1968.9793 0.97927114 2706 Q53LP3 SOWAHC Ankyrin repeat domain-containing protein SOWAHC yes yes 0 0 1 By MS/MS 2 0 1 1 82.76 74.63 3 0.00085344 97772 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.102 42.565 10001000 10001000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30858 2706 28210 259503 206043 206043 1 LLVGNDDVHIIAR Unmodified 1433.7991 0.79906235 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 1 2 1 1 2 2 1 2 1 1 2 68.931 69.054 2;3 3.6525E-07 79605 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 80.522 59.293 260510000 0 0 0 6248000 5868400 33350000 11176000 11544000 16277000 24139000 20346000 33582000 17748000 21899000 58332000 30859 3119 28211 259504;259505;259506;259507;259508;259509;259510;259511;259512;259513;259514;259515;259516;259517;259518;259519;259520 206044;206045;206046;206047;206048;206049;206050;206051;206052;206053;206054;206055;206056 206052 13 LLVGSEDYGRDLTGVQNLRK Unmodified 2232.1862 0.18624423 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 2 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 71.476 71.64 4 0.00063218 81794 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.347 39.533 36054000 0 0 0 0 0 5424500 0 0 3539800 2660100 0 0 0 0 24430000 30860 2344 28212 259521;259522;259523;259524 206057 206057 1 LLVGVDEK Unmodified 871.50148 0.50148335 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.3 2.21 2 1 30 1 1 1 2 3 3 5 3 2 2 2 3 1 1 3 44.397 44.095 1;2 2.1787E-06 49239 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 162.5 75.638 22551000000 4848100 4252400000 91959000 639510000 1136200000 1023800000 3600700000 3315800000 3976100000 914190000 1312300000 1936600000 47192000 71361000 227720000 30861 1714 28213 259525;259526;259527;259528;259529;259530;259531;259532;259533;259534;259535;259536;259537;259538;259539;259540;259541;259542;259543;259544;259545;259546;259547;259548;259549;259550;259551;259552;259553;259554;259555;259556;259557 206058;206059;206060;206061;206062;206063;206064;206065;206066;206067;206068;206069;206070;206071;206072;206073;206074;206075;206076;206077;206078;206079;206080;206081;206082;206083;206084;206085;206086;206087;206088;206089;206090;206091 206080 29 LLVLDPAQR Unmodified 1023.6077 0.60767976 1637 P50750 CDK9 Cyclin-dependent kinase 9 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.327 65.415 2 0.01094 74881 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 63.565 34.416 222250000 0 0 0 13153000 13455000 17941000 14478000 14783000 13486000 20987000 23031000 20668000 20708000 21711000 27853000 30862 1637 28214 259558;259559;259560;259561;259562;259563;259564;259565;259566;259567;259568;259569 206092;206093;206094;206095;206096;206097;206098;206099;206100;206101 206097 10 LLVLEDENANVDEVELKPDTLIK Unmodified 2608.3847 0.38472884 2328 Q13616 CUL1 Cullin-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.67 0.471 1 2 1 1 1 89.9 86.83 3 0.0010558 103932 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 46.178 32.99 10226000 3708200 3339500 3178000 0 0 0 0 0 0 0 0 0 0 0 0 30863 2328 28215 259570;259571;259572 206102;206103;206104 206103 3 LLVLITGGKSLDEISQPAQELK Unmodified 2351.3312 0.33117713 962 P12111 COL6A3 Collagen alpha-3(VI) chain yes yes 0 0 1 By matching By MS/MS By MS/MS 10 0 3 1 1 1 42.791 42.76 5 0.021054 47857 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 24.227 16.895 17699000 0 0 0 0 2337300 0 5866300 0 0 0 0 0 9494900 0 0 30864 962 28216 259573;259574;259575 206105 206105 0 LLVLNPIK Unmodified 908.60589 0.60588884 4795 Q9P0L2 MARK1 Serine/threonine-protein kinase MARK1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 75.778 75.142 2 0.0083495 86613 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 86.512 43.512 162170000 29607000 0 0 5815600 8217600 9806900 10094000 11186000 8043300 17435000 0 18315000 8253400 12082000 23318000 30865 4795 28217 259576;259577;259578;259579;259580;259581;259582;259583;259584;259585;259586;259587 206106;206107;206108;206109;206110;206111;206112;206113;206114;206115;206116;206117 206106 12 LLVLSALAEK Unmodified 1055.659 0.65904662 2278 Q13395 TARBP1 Probable methyltransferase TARBP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83.111 82.353 2 0.0045025 95267 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 72.607 43.191 76495000 26599000 2098500 0 1325000 3043900 5276500 3606400 3495000 3365500 4386900 3415100 4717300 3963600 4510600 6692100 30866 2278 28218 259588;259589;259590;259591;259592;259593;259594;259595;259596;259597;259598;259599;259600;259601 206118;206119;206120;206121;206122;206123;206124;206125;206126;206127;206128 206119 11 LLVLYSGEDDELLQR Unmodified 1761.9149 0.91487997 4387 Q9H3U1 UNC45A Protein unc-45 homolog A yes yes 0 0 0 By MS/MS 10 0 1 1 84.84 85.019 2 5.718E-05 98231 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.695 59.442 3496600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3496600 30867 4387 28219 259602 206129 206129 1 LLVPAAEGEDSLK Unmodified 1340.7187 0.71874635 3949 Q96PU8 QKI Protein quaking yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 66.379 65.505 2 0.0002156 74159 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.549 72.769 1569500000 0 380480000 3339000 57722000 76055000 91961000 85541000 95329000 77706000 91054000 135980000 123270000 111340000 100530000 139220000 30868 3949 28220 259603;259604;259605;259606;259607;259608;259609;259610;259611;259612;259613;259614;259615;259616;259617 206130;206131;206132;206133;206134;206135;206136;206137;206138;206139;206140;206141;206142;206143 206134 11 LLVPAAEGEDSLKK Unmodified 1468.8137 0.81370936 3949 Q96PU8 QKI Protein quaking yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 54.283 54.04 3 0.0013319 60405 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 46.408 25.946 250640000 0 4307700 0 18947000 22181000 7300200 23418000 22704000 9945400 19962000 27790000 31329000 22666000 14706000 25386000 30869 3949 28221 259618;259619;259620;259621;259622;259623;259624;259625;259626;259627;259628;259629;259630 206144;206145;206146;206147;206148;206149;206150;206151;206152;206153;206154;206155;206156;206157;206158;206159;206160 206157 17 LLVPSLMK Oxidation (M) 915.54633 0.54632505 623 O95155 UBE4B Ubiquitin conjugation factor E4 B yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67.259 66.09 2 0.017187 75559 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 58.167 58.167 92303000 31046000 15402000 8811400 1971200 1703200 4810200 2801700 2286900 0 4451500 3893500 3470000 2947100 3279700 5427900 30870 623 28222 259631;259632;259633;259634;259635;259636;259637;259638;259639;259640;259641;259642;259643;259644 206161;206162;206163;206164;206165 206161 762 5 LLVPSLMK Unmodified 899.55141 0.55141043 623 O95155 UBE4B Ubiquitin conjugation factor E4 B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 78.862 77.539 2 0.012141 99618 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 102.71 85.787 111460000 42922000 30838000 3390300 0 1474600 0 0 2186900 0 3699200 5932000 4045400 2785300 4172300 10016000 30871 623 28222 259645;259646;259647;259648;259649;259650;259651;259652;259653;259654;259655 206166;206167;206168;206169 206169 4 LLVPTQYVGAIIGK Unmodified 1470.881 0.88100107 4768 Q9NZI8 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 91.612 91.739 2 0.012196 106292 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.445 34.872 3241000 0 0 0 0 0 0 0 0 0 1044400 0 0 0 0 2196600 30872 4768 28223 259656;259657 206170 206170 1 LLVQALQAFR Unmodified 1157.6921 0.69207809 904 P0CW18 PRSS56 Serine protease 56 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 85.037 85.104 2 0.0031139 98432 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 77.674 61.471 77827000 0 0 0 1800700 3054300 7263400 3572700 7503900 5410300 11173000 5121900 5898300 4190800 5633600 17204000 30873 904 28224 259658;259659;259660;259661;259662;259663;259664;259665;259666;259667;259668;259669 206171;206172;206173;206174;206175;206176;206177;206178;206179;206180 206173 9 LLVQSIELQRPR Unmodified 1450.862 0.86199696 3891 Q96JC1 VPS39 Vam6/Vps39-like protein yes yes 0 0 1 By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 68.426 68.484 3 0.022587 78436 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 36.303 26.77 35920000 0 0 0 1460800 1416100 4142300 1812700 2875300 2203300 3682200 0 4803100 4071500 2102400 7349900 30874 3891 28225 259670;259671;259672;259673;259674;259675;259676;259677;259678;259679;259680 206181;206182 206182 2 LLVSASQDGK Unmodified 1016.5502 0.55022446 1921 P62873;P16520 GNB1;GNB3 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1;Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.066 29.258 2 0.0027192 30482 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.787 57.264 409540000 0 0 0 29829000 25360000 20770000 26297000 36327000 21916000 34865000 44305000 34861000 38557000 40473000 55978000 30875 1921 28226 259681;259682;259683;259684;259685;259686;259687;259688;259689;259690;259691;259692 206183;206184;206185;206186;206187;206188;206189;206190;206191 206186 8 LLVSGAASTPDK Unmodified 1157.6292 0.62920306 5201 Q9Y4G6 TLN2 Talin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 39.513 38.536 2 1.2545E-05 48705 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.16 60.932 128320000 0 90613000 0 3667500 3311500 7261400 3480300 4642800 0 5658800 0 0 5999900 3686500 0 30876 5201 28227 259693;259694;259695;259696;259697;259698;259699;259700;259701;259702 206192;206193;206194;206195;206196;206197;206198 206194 6 LLVSHGAEVTCK Unmodified 1312.6809 0.68092105 251 O15084 ANKRD28 Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.33 3.77 6 12 2 2 2 1 1 1 1 1 1 1 1 1 1 1 1 33.471 31.941 2;3 0.00013055 40546 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 133.81 116.97 357080000 212860000 44641000 51114000 2598200 3239800 6526000 2511300 3798400 2853600 3038700 4342100 6691100 4187500 4392100 4287500 30877 251 28228 259703;259704;259705;259706;259707;259708;259709;259710;259711;259712;259713;259714;259715;259716;259717;259718;259719;259720 206199;206200;206201;206202;206203;206204;206205;206206 206206 6 LLVSLPTK Unmodified 869.5586 0.5586043 3944 Q96P48 ARAP1 Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 68.478 68.541 2 0.027935 77857 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.047 20.346 38790000 0 0 0 3113100 2857000 3290300 0 0 3863300 2946400 5121500 5717400 2770100 3291600 5819400 30878 3944 28229 259721;259722;259723;259724;259725;259726;259727;259728;259729;259730 206207;206208;206209;206210;206211;206212;206213;206214 206208 8 LLVSMCQGNRDENQSINHQMAQEDAQR Oxidation (M) 3187.4193 0.41932677 1100 P20073 ANXA7 Annexin A7 yes yes 0 1 1 By MS/MS 10 0 1 1 46.373 46.428 4 8.0868E-11 52331 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 48.984 43.534 14534000 0 0 0 0 0 14534000 0 0 0 0 0 0 0 0 0 30879 1100 28230 259731 206215 206215 1580;1581 1 LLVSMCQGNRDENQSINHQMAQEDAQR 2 Oxidation (M) 3203.4142 0.41424139 1100 P20073 ANXA7 Annexin A7 yes yes 0 2 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 35.531 35.805 4 1.4726E-18 39078 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 63.697 61.246 64645000 0 0 0 0 4556500 0 0 0 6211200 16717000 0 13161000 9103200 0 14896000 30880 1100 28230 259732;259733;259734;259735;259736;259737 206216;206217;206218 206218 1580;1581 3 LLVSMCQGNRDENQSINHQMAQEDAQR Unmodified 3171.4244 0.42441215 1100 P20073 ANXA7 Annexin A7 yes yes 0 0 1 By matching By MS/MS By MS/MS 10 0 3 1 1 1 54.598 55.085 4 7.234E-14 61577 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.705 51.423 38341000 0 0 0 0 0 0 0 0 0 0 0 6320000 0 6037200 25984000 30881 1100 28230 259738;259739;259740 206219 206219 1 LLVSNLDFGVSDADIQELFAEFGTLK Unmodified 2840.4484 0.44839173 3162 Q86V81 ALYREF THO complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 103.84 97.962 3 3.7897E-05 119996 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 46.956 44.307 12020000 9667600 2352000 0 0 0 0 0 0 0 0 0 0 0 0 0 30882 3162 28231 259741;259742 206220;206221;206222 206221 3 LLVSQGASIYIENK Unmodified 1533.8403 0.84025847 549 O75832 PSMD10 26S proteasome non-ATPase regulatory subunit 10 yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 78.664 71.962 2;3 0.00082541 94346 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.39 78.074 74118000 74118000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30883 549 28232 259743;259744;259745 206223;206224;206225;206226 206225 3 LLVSQGASIYIENKEEK Unmodified 1920.0204 0.020407676 549 O75832 PSMD10 26S proteasome non-ATPase regulatory subunit 10 yes yes 0 0 1 By MS/MS 2 0 1 1 75.365 67.235 3 0.0031839 88784 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.077 40.914 22081000 22081000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30884 549 28233 259746 206227;206228 206227 2 LLVTAGASPMALDR Oxidation (M) 1429.7599 0.75989966 1112 P20749 BCL3 B-cell lymphoma 3 protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 64.886 64.923 2 0.0024301 75115 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 47.559 24.918 23132000 0 0 0 2684200 0 3654000 0 0 0 5298800 6027000 5468100 0 0 0 30885 1112 28234 259747;259748;259749;259750;259751;259752 206229;206230;206231;206232;206233 206233 1597 4 LLVTDMSDAEQYR Oxidation (M) 1555.7188 0.7188227 228 O14929 HAT1 Histone acetyltransferase type B catalytic subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 51.116 51.249 2 1.199E-11 57849 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 120.06 102.2 212690000 0 0 0 13060000 10910000 15468000 15938000 16421000 0 19970000 27367000 28508000 0 18844000 46202000 30886 228 28235 259753;259754;259755;259756;259757;259758;259759;259760;259761;259762;259763 206234;206235;206236;206237;206238;206239;206240;206241;206242;206243;206244 206234 298 11 LLVTDMSDAEQYR Unmodified 1539.7239 0.72390808 228 O14929 HAT1 Histone acetyltransferase type B catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 69.192 69.167 2 0.00014204 79279 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 104.82 33.882 104130000 0 0 0 8589100 7601700 14964000 10572000 13758000 6915500 0 25872000 0 0 15854000 0 30887 228 28235 259764;259765;259766;259767;259768;259769;259770;259771 206245;206246;206247;206248;206249;206250;206251;206252 206248 8 LLVTSQAR Unmodified 886.52362 0.52361577 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 28.21 28.463 2 0.016731 30446 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 66.799 21.826 54793000 0 0 0 3402900 0 4631000 4485100 5538600 0 6584100 7408300 9063900 5954800 0 7724600 30888 2775 28236 259772;259773;259774;259775;259776;259777;259778;259779;259780 206253;206254;206255;206256;206257 206257 5 LLVVDPETDEQLQK Unmodified 1625.8512 0.85121708 209 O14745 SLC9A3R1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.415 70.49 2 2.5825E-16 80871 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 120.06 92.947 192970000 0 0 0 7624300 6055400 6426600 11394000 9480500 5400500 9200700 32496000 28070000 7684000 20725000 48416000 30889 209 28237 259781;259782;259783;259784;259785;259786;259787;259788;259789;259790;259791;259792 206258;206259;206260;206261;206262;206263;206264;206265;206266;206267;206268;206269 206263 12 LLVVDPK Unmodified 782.49019 0.49019038 715 O96017;Q9C098 CHEK2;DCLK3 Serine/threonine-protein kinase Chk2;Serine/threonine-protein kinase DCLK3 yes no 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 51.822 45.905 2 0.045032 59872 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.616 43.723 119380000 13926000 94486000 10965000 0 0 0 0 0 0 0 0 0 0 0 0 30890 715 28238 259793;259794;259795 206270 206270 1 LLVVDRETDEFFK Unmodified 1609.8352 0.83517309 209 O14745 SLC9A3R1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 yes yes 0 0 1 By MS/MS By matching By matching By matching By matching By MS/MS 7.86 3.4 1 1 5 2 1 1 1 1 1 79.48 77.928 3 0.011342 99733 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.563 32.829 176210000 145960000 0 0 0 0 0 0 2156700 0 0 3982800 4854100 0 2657600 16603000 30891 209 28239 259796;259797;259798;259799;259800;259801;259802 206271;206272;206273 206273 0 LLVVSESSAAQEQDK Unmodified 1602.8101 0.81008055 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 48.837 48.213 2 4.1014E-66 61248 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 192.3 172.54 233270000 0 92334000 0 4277300 9921200 11504000 10561000 8104700 9540100 9453200 16552000 20274000 12190000 12518000 16046000 30892 2193 28240 259803;259804;259805;259806;259807;259808;259809;259810;259811;259812;259813;259814;259815;259816;259817 206274;206275;206276;206277;206278;206279;206280;206281;206282;206283;206284;206285;206286;206287;206288 206277 15 LLVVTDPR Unmodified 911.54402 0.54401687 875 P08865 RPSA 40S ribosomal protein SA yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 51.306 51.452 2 0.010604 57042 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.116 29.758 569050000 0 0 0 41057000 21918000 28973000 25261000 31283000 0 0 75410000 83134000 45232000 67579000 149210000 30893 875 28241 259818;259819;259820;259821;259822;259823;259824;259825;259826;259827 206289;206290;206291;206292;206293;206294;206295 206290 7 LLVVYPWTQR Unmodified 1273.7183 0.71829284 89;1967 CON__Q3SX09;CON__P02070;P69892;P69891;P02100;P68871;P02042 HBG2;HBG1;HBE1;HBB;HBD Hemoglobin subunit gamma-2;Hemoglobin subunit gamma-1;Hemoglobin subunit epsilon;Hemoglobin subunit beta;LVV-hemorphin-7;Spinorphin;Hemoglobin subunit delta no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 84.262 84.332 2 0.0014457 97789 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 92.062 63.664 + 63244000 0 0 0 6465700 0 7632400 5130100 10594000 0 5019100 0 7594200 3455600 4470200 12883000 30894 89;1967 28242 259828;259829;259830;259831;259832;259833;259834;259835;259836;259837 206296;206297;206298;206299;206300;206301;206302;206303;206304;206305;206306 206305 11 LLVYEALEYAK Unmodified 1310.7122 0.71220441 3793 Q96DB5 RMDN1 Regulator of microtubule dynamics protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 90.651 82.52 2 0.0012882 107120 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.15 66.382 17964000 17964000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30895 3793 28243 259838 206307 206307 1 LLWTTSR Unmodified 875.4865 0.48650199 1010;1341 P14923;P35222 JUP;CTNNB1 Junction plakoglobin;Catenin beta-1 no no 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 53.852 53.939 2 0.026237 62443 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 79.146 23.131 214690000 0 0 0 126230000 0 0 0 0 0 0 0 34417000 54041000 0 0 30896 1010;1341 28244 259839;259840;259841 206308;206309;206310 206310 1 LLYEANLPENFR Unmodified 1477.7565 0.75652884 3280 Q8IYB5 SMAP1 Stromal membrane-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.023 79.167 2 0.00015586 91555 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 85.807 67.027 98624000 0 0 0 0 0 5970100 4668300 5787000 5386400 10145000 9589200 8751700 6687500 8978400 32661000 30897 3280 28245 259842;259843;259844;259845;259846;259847;259848;259849;259850;259851;259852 206311;206312;206313;206314;206315;206316;206317;206318;206319;206320 206312 10 LLYEELYNK Unmodified 1183.6125 0.61249036 478 O75330 HMMR Hyaluronan mediated motility receptor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.345 68.423 2 0.011616 78517 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 62.546 37.623 56661000 0 0 0 1938900 3524800 3670400 3750200 3641100 3561000 4811600 4993700 6529900 4545300 5250600 10444000 30898 478 28246 259853;259854;259855;259856;259857;259858;259859;259860;259861;259862;259863;259864 206321;206322;206323;206324;206325;206326;206327;206328;206329;206330;206331;206332;206333 206323 13 LLYENIFAIMYSK Unmodified 1603.832 0.83200197 5374 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 2 50.494 50.718 3 0.040233 56094 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 21.301 8.4681 + 410180000 0 0 0 0 19505000 0 44543000 31909000 0 0 0 0 0 0 314220000 30899 5374 28247 259865;259866;259867;259868;259869 206334 206334 1 LLYGMALVR Oxidation (M) 1050.5896 0.58958685 5211 Q9Y4W2 LAS1L Ribosomal biogenesis protein LAS1L yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 65.157 65.155 2 0.026484 73699 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 44.447 17.845 22260000 0 0 0 1520400 1856000 2302600 1831300 2332400 0 0 0 0 4545000 3520500 4352100 30900 5211 28248 259870;259871;259872;259873;259874;259875;259876;259877 206335 206335 1 LLYILNPPETQVEK Unmodified 1655.9134 0.91342341 3111 Q7Z6E9 RBBP6 E3 ubiquitin-protein ligase RBBP6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 82.567 82.628 2 0.018144 95260 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.353 44.25 41232000 0 0 0 1532800 2485000 3372200 2888000 3773200 3287800 3668600 4062100 5834100 0 4182100 6146500 30901 3111 28249 259878;259879;259880;259881;259882;259883;259884;259885;259886;259887;259888 206336;206337;206338 206336 0 LLYIPLAK Unmodified 929.59499 0.5949898 3431 Q8NEX9 SDR9C7 Short-chain dehydrogenase/reductase family 9C member 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 80.506 80.572 2 0.012144 93523 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 75.311 53.18 56700000 0 0 0 28390000 0 3124200 0 5235200 1243300 4412000 4379100 4861100 3049400 2005500 0 30902 3431 28250 259889;259890;259891;259892;259893;259894;259895;259896;259897 206339;206340;206341;206342;206343 206343 5 LLYNNVSNFGR Unmodified 1295.6622 0.66223452 2040 Q00610 CLTC Clathrin heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.958 65.046 2 0.00087155 73529 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 87.913 76.277 548890000 0 0 0 21224000 19298000 48207000 32286000 32075000 20914000 41279000 63330000 73966000 33863000 47626000 114830000 30903 2040 28251 259898;259899;259900;259901;259902;259903;259904;259905;259906;259907;259908;259909 206344;206345;206346;206347;206348;206349;206350;206351;206352 206349 9 LLYNRPGTVSSLK Unmodified 1446.8195 0.81946344 1365 P35659 DEK Protein DEK yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.53 1.88 1 16 1 1 1 2 1 1 1 2 1 2 1 1 2 49.021 48.749 2;3 3.3081E-07 53619 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.08 79.28 2647400000 19602000 0 0 125390000 115510000 228930000 129870000 153770000 166880000 255230000 297150000 366060000 181060000 189330000 418580000 30904 1365 28252 259910;259911;259912;259913;259914;259915;259916;259917;259918;259919;259920;259921;259922;259923;259924;259925;259926 206353;206354;206355;206356;206357;206358;206359;206360;206361;206362;206363;206364;206365;206366;206367;206368;206369;206370;206371;206372 206359 17 LLYPLGGQTNLR Unmodified 1343.7561 0.75613491 2756 Q5SRE5 NUP188 Nucleoporin NUP188 homolog yes yes 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 75.601 75.639 2 0.010808 86359 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 50.284 32.387 78994000 0 0 0 4233700 5033900 8083300 5538500 8603300 7082100 8570800 6261800 9745400 7821200 8019600 0 30905 2756 28253 259927;259928;259929;259930;259931;259932;259933;259934;259935;259936;259937 206373;206374 206373 2 LLYQIAQAEAK Unmodified 1246.6921 0.69213767 3669 Q92833 JARID2 Protein Jumonji yes yes 0 0 0 By MS/MS 2 0 1 1 72.437 64.199 2 0.041108 85109 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.16 27.012 5539300 5539300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30906 3669 28254 259938 206375 206375 1 LLYVLEADAAIAK Unmodified 1388.7915 0.79151736 399 O60437 PPL Periplakin yes yes 0 0 0 By MS/MS 2 0 1 1 90.965 82.835 2 0.041073 107569 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.297 36.018 5002600 5002600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30907 399 28255 259939 206376 206376 1 LLYVTPEK Unmodified 961.54843 0.54843354 1732 P54132 BLM Bloom syndrome protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 49.366 47.66 1;2 0.0044578 53664 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 112.37 0 1799400000 28948000 1381900000 44087000 13567000 15454000 28856000 21355000 19985000 17358000 33639000 43178000 0 31309000 31073000 88664000 30908 1732 28256 259940;259941;259942;259943;259944;259945;259946;259947;259948;259949;259950;259951;259952;259953;259954;259955;259956 206377;206378;206379;206380;206381;206382;206383;206384;206385;206386;206387;206388;206389;206390;206391;206392;206393;206394 206391 16 LMAEDEEGYRK Unmodified 1339.6078 0.60781569 1656;1655 P51532;P51531 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 23.587 23.681 3 0.00027942 24724 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 62.466 53.737 70718000 0 0 0 0 7099200 7189900 7032400 7902400 0 15411000 0 0 16488000 9595600 0 30909 1656;1655 28257 259957;259958;259959;259960;259961;259962;259963;259964 206395;206396;206397;206398;206399;206400;206401 206400 6 LMAQEQVR Oxidation (M) 989.49641 0.49641475 3631 Q92576 PHF3 PHD finger protein 3 yes yes 0 1 0 By matching By MS/MS 10 0 2 1 1 15.734 15.655 2 0.047479 15472 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 42.109 22.473 6218600 0 0 0 2494400 0 0 3724200 0 0 0 0 0 0 0 0 30910 3631 28258 259965;259966 206402 206402 1 LMASTQPFK Oxidation (M) 1037.5216 0.52156686 662 O95453 PARN Poly(A)-specific ribonuclease PARN yes yes 0 1 0 By MS/MS 2 0 1 1 41.406 36.31 2 0.01626 47376 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.318 37.049 33441000 0 33441000 0 0 0 0 0 0 0 0 0 0 0 0 0 30911 662 28259 259967 206403 206403 803 1 LMASTQPFK Unmodified 1021.5267 0.52665224 662 O95453 PARN Poly(A)-specific ribonuclease PARN yes yes 0 0 0 By MS/MS 2 0 1 1 52.556 44.541 2 0.0053721 61483 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 109.86 91.132 95465000 95465000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30912 662 28259 259968 206404 206404 1 LMATQMTAAGLGPGVEQTK Unmodified 1902.9543 0.95431872 3663 Q92797 SYMPK Symplekin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 71.831 71.952 2 1.0784E-23 82228 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 126.95 101.73 32444000 0 0 0 0 2136100 2478200 0 2818500 0 3225300 3345600 4601300 2816300 3940800 7081900 30913 3663 28260 259969;259970;259971;259972;259973;259974;259975;259976;259977 206405;206406;206407;206408;206409;206410 206406 6 LMAVPNLFMLETVDSVK Unmodified 1905.9944 0.99439262 599 O94903 PROSC Proline synthase co-transcribed bacterial homolog protein yes yes 0 0 0 By MS/MS 2 0 1 1 100.72 92.589 2 0.00083353 119273 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.878 54.525 7413600 7413600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30914 599 28261 259978 206411 206411 1 LMAYLAGAK Unmodified 936.51027 0.5102739 3021 Q6ZW49 PAXIP1 PAX-interacting protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 62.753 54.485 2 0.03281 73516 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.038 51.052 8680900 8680900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30915 3021 28262 259979 206412 206412 1 LMCPQEIVDYIADK Unmodified 1693.8055 0.80552922 187 O14561 NDUFAB1 Acyl carrier protein, mitochondrial yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 96.393 92.761 2 1.493E-14 114624 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 142.08 122.84 82478000 0 81888000 589510 0 0 0 0 0 0 0 0 0 0 0 0 30916 187 28263 259980;259981 206413 206413 1 LMCPQEIVDYIADK Oxidation (M) 1709.8004 0.80044384 187 O14561 NDUFAB1 Acyl carrier protein, mitochondrial yes yes 0 1 0 By MS/MS 2 0 1 1 89.739 84.866 2 0.0018263 105493 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.739 60.767 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30917 187 28263 259982 206414 206414 257 1 LMDEAVLALR Unmodified 1129.6165 0.61652988 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.272 78.33 2 0.00091498 90535 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 114.5 60.34 126460000 0 0 0 2720700 8156700 14903000 6321500 11587000 6698300 14953000 12998000 14551000 0 12637000 20936000 30918 3641 28264 259983;259984;259985;259986;259987;259988;259989;259990;259991;259992;259993;259994 206415;206416;206417;206418;206419;206420;206421;206422;206423;206424;206425;206426 206420 11 LMDEAVLALR Oxidation (M) 1145.6114 0.6114445 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.348 68.426 2 0.0037016 78109 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 68.224 41.84 145040000 0 0 0 5777800 7867400 13274000 10170000 7860000 8526200 17262000 14510000 19459000 12549000 14888000 12895000 30919 3641 28264 259995;259996;259997;259998;259999;260000;260001;260002;260003;260004;260005;260006 206427;206428;206429;206430;206431;206432;206433;206434;206435;206436;206437;206438 206436 5148 12 LMDEVAGIVAAR Oxidation (M) 1259.6544 0.65437195 120 O00154 ACOT7 Cytosolic acyl coenzyme A thioester hydrolase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 2 2 2 1 2 2 63.1 63.039 2;3 1.1306E-08 72255 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 136.33 116.54 2859200000 0 0 0 228060000 486850000 497370000 0 0 0 413810000 475420000 757640000 0 0 0 30920 120 28265 260007;260008;260009;260010;260011;260012;260013;260014;260015;260016;260017 206439;206440;206441;206442;206443;206444;206445;206446;206447;206448;206449;206450;206451;206452;206453;206454;206455;206456;206457;206458;206459;206460;206461;206462;206463;206464;206465 206461 157 27 LMDEVAGIVAAR Unmodified 1243.6595 0.65945733 120 O00154 ACOT7 Cytosolic acyl coenzyme A thioester hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 2 2 2 1 1 2 2 2 1 75.881 75.873 2;3 0.00048067 87419 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 74.962 59.624 3249800000 0 0 0 172550000 472310000 548960000 5171800 6861600 0 587360000 677000000 770610000 0 9015700 0 30921 120 28265 260018;260019;260020;260021;260022;260023;260024;260025;260026;260027;260028;260029;260030;260031;260032 206466;206467;206468;206469;206470;206471;206472;206473;206474;206475;206476 206471 9 LMDGAPSESEK Unmodified 1162.5176 0.5176037 4431 Q9H7B4 SMYD3 Histone-lysine N-methyltransferase SMYD3 yes yes 0 0 0 By MS/MS 2 0 1 1 26.498 22.238 2 0.021365 29588 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.246 45.719 21103000 0 21103000 0 0 0 0 0 0 0 0 0 0 0 0 0 30922 4431 28266 260033 206477 206477 1 LMDGTSQALAK Unmodified 1133.5751 0.575059 3107 Q7Z5K2 WAPAL Wings apart-like protein homolog yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 37.362 35.894 2 0.00378 40504 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 63.076 36.473 142340000 3745200 79891000 2126900 5187700 5897600 8188900 6913800 0 0 10811000 10154000 9427900 0 0 0 30923 3107 28267 260034;260035;260036;260037;260038;260039;260040;260041;260042;260043;260044 206478;206479;206480;206481;206482;206483;206484 206478 6 LMDGTSQALAK Oxidation (M) 1149.57 0.56997362 3107 Q7Z5K2 WAPAL Wings apart-like protein homolog yes yes 0 1 0 By MS/MS By matching 2 0 2 1 1 25.807 22.196 2 0.0080837 29541 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.414 28.608 22508000 0 21006000 1501700 0 0 0 0 0 0 0 0 0 0 0 0 30924 3107 28267 260045;260046 206485 206485 4716 1 LMDLDVEQLGIPEQEYSCVVK Oxidation (M) 2480.1815 0.1814777 959 P12004 PCNA Proliferating cell nuclear antigen yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3.89 3.28 6 1 2 2 3 2 1 1 89.688 85.928 2;3 5.4104E-109 107801 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 201.24 189.8 3105900000 125610000 2901100000 70505000 0 0 0 0 0 0 0 6849000 0 0 1908100 0 30925 959 28268 260047;260048;260049;260050;260051;260052;260053;260054;260055 206486;206487;206488;206489;206490;206491;206492;206493;206494 206488 1253 8 LMDLDVEQLGIPEQEYSCVVK Unmodified 2464.1866 0.18656308 959 P12004 PCNA Proliferating cell nuclear antigen yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 1 3 2 94.48 90.132 2;3 3.1367E-30 112770 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 117.55 103.81 2122100000 159210000 1906100000 56771000 0 0 0 0 0 0 0 0 0 0 0 0 30926 959 28268 260056;260057;260058;260059;260060;260061 206495;206496;206497;206498;206499;206500;206501;206502;206503 206499 9 LMDLLADSR Unmodified 1032.5274 0.52738052 430 O60763 USO1 General vesicular transport factor p115 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 70.092 70.231 2 0.004238 79778 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.476 68.382 51124000 0 0 0 0 2079300 6689500 3407100 3205800 0 4666000 5812700 6849700 3603100 3584000 11227000 30927 430 28269 260062;260063;260064;260065;260066;260067;260068;260069;260070;260071 206504;206505;206506;206507;206508 206505 5 LMDLLADSR Oxidation (M) 1048.5223 0.52229515 430 O60763 USO1 General vesicular transport factor p115 yes yes 0 1 0 By MS/MS 10 0 1 1 51.861 52.07 2 0.042613 58029 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 56.729 34.598 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30928 430 28269 260072 206509 206509 1 LMDLLGEGLK Unmodified 1087.5947 0.59473181 1733 P54136 RARS Arginine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 16 1 1 1 2 2 2 1 1 1 2 1 1 81.499 81.585 2 0.0023779 94534 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 84.213 49.405 220560000 0 0 0 4401900 5121400 17714000 9569700 14940000 13010000 20760000 23601000 20927000 12188000 20865000 57464000 30929 1733 28270 260073;260074;260075;260076;260077;260078;260079;260080;260081;260082;260083;260084;260085;260086;260087;260088 206510;206511;206512;206513;206514;206515;206516;206517;206518 206510 9 LMDLLGEGLK Oxidation (M) 1103.5896 0.58964643 1733 P54136 RARS Arginine--tRNA ligase, cytoplasmic yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 72.146 71.628 2 0.0039078 82555 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 66.962 25.66 19302000 0 0 0 8719100 10583000 0 0 0 0 0 0 0 0 0 0 30930 1733 28270 260089;260090;260091;260092;260093;260094 206519;206520;206521;206522;206523;206524 206524 2813 6 LMDLLPK Unmodified 828.47791 0.47791114 2620 Q16630 CPSF6 Cleavage and polyadenylation specificity factor subunit 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 72.863 72.331 2 0.026498 83217 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 78.616 42.059 692000000 0 358670000 31915000 17028000 0 25889000 21839000 27542000 21105000 0 35997000 39576000 24629000 33742000 54071000 30931 2620 28271 260095;260096;260097;260098;260099;260100;260101;260102;260103;260104;260105;260106 206525;206526;206527;206528 206527 4 LMDLRNEYLQADEANK Oxidation (M) 1937.9153 0.91529068 4856 Q9UBS8 RNF14 E3 ubiquitin-protein ligase RNF14 yes yes 0 1 1 By matching By MS/MS 2 0 2 1 1 60.924 54.889 3 0.00088409 68712 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 60.317 42.178 15215000 8045200 0 7169600 0 0 0 0 0 0 0 0 0 0 0 0 30932 4856 28272 260107;260108 206529;206530 206530 6215 2 LMDQASR Oxidation (M) 835.3858 0.38580166 1435 P41227;Q9BSU3 NAA10;NAA11 N-alpha-acetyltransferase 10;N-alpha-acetyltransferase 11 yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 2 2 1 2 2 2 5.9494 6.0683 2 0.013837 3584 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 107.43 61.059 716620000 0 0 0 0 6546800 7288900 64864000 54862000 48938000 161860000 143370000 228890000 0 0 0 30933 1435 28273 260109;260110;260111;260112;260113;260114;260115;260116;260117;260118;260119;260120;260121 206531;206532;206533;206534;206535;206536;206537 206536 2252 7 LMDQASR Unmodified 819.39089 0.39088704 1435 P41227;Q9BSU3 NAA10;NAA11 N-alpha-acetyltransferase 10;N-alpha-acetyltransferase 11 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 10.933 11.07 2 0.023353 8568 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 91.626 41.507 1584600000 0 0 0 7682400 12187000 15811000 119370000 139200000 82755000 269240000 308720000 618620000 0 2158900 8858800 30934 1435 28273 260122;260123;260124;260125;260126;260127;260128;260129;260130;260131;260132 206538;206539;206540;206541;206542 206541 4 LMDQASRAMIENFNAK Unmodified 1837.8815 0.88148813 1435 P41227;Q9BSU3 NAA10;NAA11 N-alpha-acetyltransferase 10;N-alpha-acetyltransferase 11 yes no 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 76.752 70.268 2;3 0.00039932 90827 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.431 60.202 88731000 54506000 34225000 0 0 0 0 0 0 0 0 0 0 0 0 0 30935 1435 28274 260133;260134;260135 206543;206544;206545 206545 2 LMDQLEALK Unmodified 1059.5634 0.56343168 4540 Q9NP79 VTA1 Vacuolar protein sorting-associated protein VTA1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.91 3.42 2 1 8 2 1 1 1 1 1 1 1 1 1 68.96 67.854 2 0.003411 86156 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.8 85.01 643870000 0 535970000 6552700 0 5608100 12341000 0 0 6990900 14251000 13493000 13494000 0 10663000 24508000 30936 4540 28275 260136;260137;260138;260139;260140;260141;260142;260143;260144;260145;260146 206546;206547;206548;206549;206550;206551;206552 206547 6 LMDQLEALK Oxidation (M) 1075.5583 0.5583463 4540 Q9NP79 VTA1 Vacuolar protein sorting-associated protein VTA1 homolog yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 57.818 50.805 2 0.0064231 65632 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.442 61.883 161750000 6962500 154790000 0 0 0 0 0 0 0 0 0 0 0 0 0 30937 4540 28275 260147;260148 206553;206554 206553 5957 2 LMDSMVAEFLK 2 Oxidation (M) 1314.62 0.61996028 1408 P40123 CAP2 Adenylyl cyclase-associated protein 2 yes yes 0 2 0 By MS/MS By MS/MS 2.2 0.4 4 1 3 2 78.457 74.808 2 0.0031423 93393 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.355 56.437 218410000 0 187750000 30659000 0 0 0 0 0 0 0 0 0 0 0 0 30938 1408 28276 260149;260150;260151;260152;260153 206555;206556;206557;206558;206559 206556 2204;2205 5 LMDSMVAEFLK Oxidation (M) 1298.625 0.62504566 1408 P40123 CAP2 Adenylyl cyclase-associated protein 2 yes yes 0 1 0 By MS/MS By matching 2 0 2 1 1 89.224 85.559 2 0.030972 106466 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 51.092 29.644 77062000 0 68481000 8581400 0 0 0 0 0 0 0 0 0 0 0 0 30939 1408 28276 260154;260155 206560 206560 2204;2205 1 LMDSVALK Unmodified 875.47864 0.47863942 4703 Q9NWV4 C1orf123 UPF0587 protein C1orf123 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 47.745 48.229 2 0.045385 53185 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.561 29.779 13006000 0 0 0 0 0 0 0 0 0 0 0 0 0 2032400 10973000 30940 4703 28277 260156;260157 206561 206561 1 LMDVGLIAIR Oxidation (M) 1115.6373 0.63726532 1313 P31948 STIP1 Stress-induced-phosphoprotein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.33 2 2 11 2 1 1 1 1 1 1 1 1 1 1 1 1 1 78.732 77.599 2 0.0018492 89635 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 79.906 63.13 685100000 250210000 38718000 170710000 5936700 6009300 0 9137200 7735400 7527600 15627000 38290000 43877000 8408400 26774000 56143000 30941 1313 28278 260158;260159;260160;260161;260162;260163;260164;260165;260166;260167;260168;260169;260170;260171;260172 206562;206563;206564;206565;206566;206567;206568;206569;206570;206571;206572;206573;206574;206575;206576;206577 206569 1961 16 LMDVGLIAIR Unmodified 1099.6424 0.6423507 1313 P31948 STIP1 Stress-induced-phosphoprotein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.87 3 5 1 1 1 1 1 1 1 1 87.01 85.175 2 9.5079E-06 107280 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.09 83.968 364190000 175080000 35450000 47585000 0 0 0 0 0 3320100 0 11222000 14773000 0 13421000 63331000 30942 1313 28278 260173;260174;260175;260176;260177;260178;260179;260180 206578;206579;206580;206581;206582;206583;206584;206585 206578 7 LMEALEPPLEEQQI Oxidation (M) 1654.8124 0.81238874 3897 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 82.687 82.711 2 0.00080801 94904 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 60.102 46.511 71174000 0 0 0 4268300 8005000 8412600 8960600 0 6198200 0 0 11285000 0 11055000 12989000 30943 3897 28279 260181;260182;260183;260184;260185;260186;260187;260188 206586;206587 206587 5398 2 LMEALEPPLEEQQI Unmodified 1638.8175 0.81747411 3897 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 87.83 87.931 2 0.0098297 101659 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.432 43.476 31835000 0 0 0 0 1949700 2730300 0 2398300 1766500 4255400 3189300 3453100 1405400 2570700 8116100 30944 3897 28279 260189;260190;260191;260192;260193;260194;260195;260196;260197;260198 206588 206588 1 LMEDLDR Oxidation (M) 906.41168 0.41168206 825 P06703 S100A6 Protein S100-A6 yes yes 0 1 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.278 22.483 2 0.049603 23632 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 49.358 32.395 98552000 0 0 0 5220600 1631100 4307100 4179800 3040700 2631800 5164200 16322000 19637000 5280900 11280000 19856000 30945 825 28280 260199;260200;260201;260202;260203;260204;260205;260206;260207;260208;260209;260210 206589;206590 206589 993 2 LMEDLDRNK Oxidation (M) 1148.5496 0.54957253 825 P06703 S100A6 Protein S100-A6 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.96 3.45 6 1 20 2 3 2 2 2 3 2 1 2 2 1 2 1 1 1 15.968 15.535 2;3 0.0011244 14822 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 93.178 64.016 1682200000 25844000 170440000 86651000 47859000 29047000 78256000 53259000 34025000 24852000 84734000 196260000 274830000 60204000 185990000 329940000 30946 825 28281 260211;260212;260213;260214;260215;260216;260217;260218;260219;260220;260221;260222;260223;260224;260225;260226;260227;260228;260229;260230;260231;260232;260233;260234;260235;260236;260237 206591;206592;206593;206594;206595;206596;206597;206598;206599;206600;206601;206602;206603;206604;206605;206606;206607;206608;206609 206607 993 17 LMEDLDRNK Unmodified 1132.5547 0.55465791 825 P06703 S100A6 Protein S100-A6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.45 1 6 1 1 1 1 1 1 1 28.229 27.786 2 3.3357E-07 28655 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 160.11 100.9 488220000 0 6741000 0 0 17746000 21970000 21212000 0 0 0 0 87270000 0 84069000 249220000 30947 825 28281 260238;260239;260240;260241;260242;260243;260244 206610;206611;206612;206613 206612 1 LMEEDELPSWIIK Oxidation (M) 1617.796 0.79601039 1656;1655 P51532;P51531 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 86.774 86.915 2 0.00039987 100480 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.143 50.706 26202000 0 0 0 0 0 0 0 0 3286100 5493800 4110200 0 1893900 2669400 8748400 30948 1656;1655 28282 260245;260246;260247;260248;260249;260250 206614;206615;206616;206617;206618 206615 2663 5 LMEEDELPSWIIKDDAEVERLTCEEEEEK Unmodified 3563.6171 0.61712591 1656;1655 P51532;P51531 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 no no 0 0 2 By MS/MS 2 0 1 1 96.55 88.42 4 9.6644E-12 114258 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.451 59.935 12989000 12989000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30949 1656;1655 28283 260251 206619 206619 1 LMEEDPAFRR Unmodified 1262.6078 0.60775611 378 O43896 KIF1C Kinesin-like protein KIF1C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 39.903 40.072 3 0.012882 45317 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 33.866 16.924 77277000 0 0 0 6756100 6300900 6059100 4682500 5302900 6634300 11316000 10539000 8671900 4336500 0 6677300 30950 378 28284 260252;260253;260254;260255;260256;260257;260258;260259;260260;260261;260262 206620;206621;206622;206623 206622 4 LMEEIMSEK 2 Oxidation (M) 1140.5043 0.50426182 1062 P17844 DDX5 Probable ATP-dependent RNA helicase DDX5 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 2 2 2 1 2 2 2 2 2 1 2 22.622 22.841 2 0.0016849 23610 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 80.455 58.324 316140000 0 0 0 10309000 13018000 19811000 22174000 10385000 18795000 40089000 38752000 54048000 45709000 15124000 27922000 30951 1062 28285 260263;260264;260265;260266;260267;260268;260269;260270;260271;260272;260273;260274;260275;260276;260277;260278;260279;260280;260281;260282;260283 206624;206625;206626;206627;206628;206629;206630;206631;206632;206633;206634;206635;206636;206637;206638;206639;206640 206633 1487;1488 7 LMEEIMSEK Oxidation (M) 1124.5093 0.5093472 1062 P17844 DDX5 Probable ATP-dependent RNA helicase DDX5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.6 1.74 1 19 1 2 2 2 2 1 1 1 2 2 1 1 2 36.828 36.731 2 0.0027586 40884 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 87.639 38.281 207430000 0 9209600 0 16957000 16548000 20847000 13571000 9074600 9424100 14025000 22823000 28759000 13926000 7745100 24515000 30952 1062 28285 260284;260285;260286;260287;260288;260289;260290;260291;260292;260293;260294;260295;260296;260297;260298;260299;260300;260301;260302;260303 206641;206642;206643;206644;206645;206646;206647;206648;206649;206650;206651;206652;206653;206654;206655;206656;206657;206658;206659 206655 1487;1488 16 LMEEIMSEK Unmodified 1108.5144 0.51443258 1062 P17844 DDX5 Probable ATP-dependent RNA helicase DDX5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 53.945 53.626 2 0.0039296 59309 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 99.442 60.65 580780000 0 37743000 0 26802000 33426000 26598000 41139000 36676000 24425000 51116000 60898000 50879000 51271000 55823000 83986000 30953 1062 28285 260304;260305;260306;260307;260308;260309;260310;260311;260312;260313;260314;260315;260316 206660;206661;206662;206663;206664;206665;206666;206667;206668;206669;206670;206671;206672;206673;206674 206664 15 LMEEISTSAAPAARPAAAK Unmodified 1883.9775 0.977497 3915 Q96L91 EP400 E1A-binding protein p400 yes yes 0 0 1 By MS/MS 2 0 1 1 54.911 51.014 3 0.0038242 63863 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 39.91 23.771 3620000 0 0 3620000 0 0 0 0 0 0 0 0 0 0 0 0 30954 3915 28286 260317 206675 206675 1 LMEFNLGTDK Oxidation (M) 1182.5591 0.55907458 160 O00471 EXOC5 Exocyst complex component 5 yes yes 0 1 0 By MS/MS 2 0 2 2 62.12 56.235 2 0.026671 71934 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.699 31.445 25505000 0 25505000 0 0 0 0 0 0 0 0 0 0 0 0 0 30955 160 28287 260318;260319 206676;206677;206678 206676 3 LMEGLEVFAR Oxidation (M) 1179.5958 0.59579444 3703 Q93015 NAT6 N-acetyltransferase 6 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 72.273 72.39 2 0.001957 82961 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 78.264 55.483 126780000 0 0 0 0 0 10182000 32047000 33173000 38854000 12522000 0 0 0 0 0 30956 3703 28288 260320;260321;260322;260323;260324 206679;206680;206681;206682 206679 5283 2 LMEGLEVFAR Unmodified 1163.6009 0.60087982 3703 Q93015 NAT6 N-acetyltransferase 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 81.951 82.132 2 0.0019733 94624 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 97.635 64.085 36504000 0 0 0 0 0 0 7422900 14572000 14509000 0 0 0 0 0 0 30957 3703 28288 260325;260326;260327 206683;206684;206685 206684 3 LMEIITVENPK Oxidation (M) 1301.6901 0.69008876 3615 Q92538 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 65.733 60.41 2 0.014329 77397 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 61.593 44.824 26535000 0 26535000 0 0 0 0 0 0 0 0 0 0 0 0 0 30958 3615 28289 260328;260329 206686;206687 206686 5113 2 LMEIITVENPK Unmodified 1285.6952 0.69517413 3615 Q92538 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By matching 10 0 6 1 1 1 1 1 1 74.004 74.146 2 0.0089184 84601 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 79.974 58.467 21252000 0 0 0 0 0 2902600 0 5528800 0 2882000 0 0 3048100 2455900 4434200 30959 3615 28289 260330;260331;260332;260333;260334;260335 206688 206688 0 LMEIYQEK Oxidation (M) 1068.5161 0.51614714 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.536 32.722 2 0.0044239 35852 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 98.523 76.392 114350000 0 0 0 9101700 7553400 13674000 8139000 6838700 5410500 11673000 7928300 14817000 12381000 9557600 7275400 30960 3641 28290 260336;260337;260338;260339;260340;260341;260342;260343;260344;260345;260346;260347 206689;206690;206691;206692;206693;206694;206695;206696;206697 206690 5149 9 LMEIYQEK Unmodified 1052.5212 0.52123251 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.709 47.871 2 0.0048728 53832 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 109.01 63.294 214810000 0 0 0 8880300 11123000 19128000 10902000 16919000 7451400 27065000 17492000 29113000 17632000 19199000 29908000 30961 3641 28290 260348;260349;260350;260351;260352;260353;260354;260355;260356;260357;260358;260359 206698;206699;206700;206701;206702;206703;206704;206705;206706;206707;206708 206700 9 LMELACNMK Oxidation (M) 1124.5028 0.50282203 5171 Q9Y3P9 RABGAP1 Rab GTPase-activating protein 1 yes yes 0 1 0 By MS/MS 2 0 1 1 43.172 38.024 2 0.032318 49414 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.464 36.525 11189000 0 11189000 0 0 0 0 0 0 0 0 0 0 0 0 0 30962 5171 28291 260360 206709 206709 1 LMELACNMK Unmodified 1108.5079 0.50790741 5171 Q9Y3P9 RABGAP1 Rab GTPase-activating protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 59.428 53.585 2 0.037197 69055 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.464 36.525 27387000 0 27387000 0 0 0 0 0 0 0 0 0 0 0 0 0 30963 5171 28291 260361 206710 206710 1 LMELFPANK Oxidation (M) 1077.5529 0.55286699 3043 Q7L1Q6 BZW1 Basic leucine zipper and W2 domain-containing protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 56.271 56.396 2 0.00012539 63812 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 149.4 123.46 1028700000 0 0 0 72502000 64518000 94141000 84470000 58343000 50565000 103740000 103160000 135210000 79466000 66549000 116000000 30964 3043 28292 260362;260363;260364;260365;260366;260367;260368;260369;260370;260371;260372;260373;260374;260375;260376;260377;260378;260379;260380;260381;260382;260383;260384;260385 206711;206712;206713;206714;206715;206716;206717;206718;206719;206720;206721;206722;206723;206724;206725;206726;206727;206728;206729;206730;206731;206732;206733;206734;206735;206736;206737;206738 206715 4666 25 LMELFPANK Unmodified 1061.558 0.55795237 3043 Q7L1Q6 BZW1 Basic leucine zipper and W2 domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.206 73.271 2 1.7924E-05 83620 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 133.6 103.41 955410000 0 0 0 50339000 61124000 81750000 45533000 63434000 58508000 85191000 101030000 107230000 63071000 77198000 161010000 30965 3043 28292 260386;260387;260388;260389;260390;260391;260392;260393;260394;260395;260396;260397 206739;206740;206741;206742;206743;206744;206745;206746;206747;206748;206749;206750;206751 206742 12 LMELHGEGSSSGK Oxidation (M) 1346.6136 0.61362935 1842 P61247 RPS3A 40S ribosomal protein S3a yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.75 5 2 40 1 3 3 2 4 4 3 4 3 4 4 2 3 3 4 13.768 13.423 2;3 2.2265E-07 16036 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 106.17 95.986 2322700000 56244000 978220000 371100000 10682000 111720000 102460000 57070000 81045000 42679000 121180000 104370000 22389000 95460000 51585000 116510000 30966 1842 28293 260398;260399;260400;260401;260402;260403;260404;260405;260406;260407;260408;260409;260410;260411;260412;260413;260414;260415;260416;260417;260418;260419;260420;260421;260422;260423;260424;260425;260426;260427;260428;260429;260430;260431;260432;260433;260434;260435;260436;260437;260438;260439;260440;260441;260442;260443;260444 206752;206753;206754;206755;206756;206757;206758;206759;206760;206761;206762;206763;206764;206765;206766;206767;206768;206769;206770;206771;206772;206773;206774;206775;206776;206777;206778;206779;206780;206781;206782;206783;206784 206773 2990 20 LMELHGEGSSSGK Unmodified 1330.6187 0.61871473 1842 P61247 RPS3A 40S ribosomal protein S3a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.55 3.6 5 2 15 1 4 2 1 1 1 1 1 1 1 1 1 2 2 2 25.551 24.392 2;3 7.0361E-108 31341 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 240.85 222.62 2520700000 108670000 708540000 532330000 73499000 74420000 70588000 63291000 96456000 50018000 79892000 140090000 137550000 90555000 101050000 193780000 30967 1842 28293 260445;260446;260447;260448;260449;260450;260451;260452;260453;260454;260455;260456;260457;260458;260459;260460;260461;260462;260463;260464;260465;260466 206785;206786;206787;206788;206789;206790;206791;206792;206793;206794;206795;206796;206797;206798;206799;206800;206801;206802;206803;206804;206805;206806;206807 206800 12 LMELLEEISER Oxidation (M) 1376.6857 0.68573166 1852 P61599 NAA20 N-alpha-acetyltransferase 20 yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 78.797 78.974 2 0.0010398 91109 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 98.943 76.857 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30968 1852 28294 260467;260468 206808;206809 206808 3004 2 LMELLEEISERK Oxidation (M) 1504.7807 0.78069468 1852 P61599 NAA20 N-alpha-acetyltransferase 20 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 73.391 73.558 3 0.00032287 84454 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 68.809 57.226 119190000 0 0 0 0 0 0 31397000 37714000 50080000 0 0 0 0 0 0 30969 1852 28295 260469;260470;260471 206810;206811;206812 206812 3004 2 LMELLEEISERK Unmodified 1488.7858 0.78578005 1852 P61599 NAA20 N-alpha-acetyltransferase 20 yes yes 0 0 1 By MS/MS 2 0 1 1 91.563 83.433 3 0.0017025 108338 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.624 59.66 11017000 11017000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30970 1852 28295 260472 206813 206813 1 LMELYER Oxidation (M) 968.46372 0.46371763 4879 Q9UG63 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 35.789 35.851 2 0.041673 39998 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 53.166 30.147 44100000 0 0 0 4299800 3847000 4922100 5075200 0 4168900 4958200 5749300 0 5642400 5437400 0 30971 4879 28296 260473;260474;260475;260476;260477;260478;260479;260480;260481 206814 206814 6230 1 LMELYERLEELDADK Unmodified 1865.9081 0.90808003 4879 Q9UG63 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 2 2 3 1 90.963 85.207 2;3 1.1038E-40 108967 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 156.81 119.96 129800000 126830000 2977700 0 0 0 0 0 0 0 0 0 0 0 0 0 30972 4879 28297 260482;260483;260484;260485 206815;206816;206817 206817 3 LMELYERLEELDADK Oxidation (M) 1881.903 0.90299466 4879 Q9UG63 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 0 1 1 By MS/MS 2 0 1 1 86.096 77.966 3 0.00019545 101652 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.91 51.107 63206000 63206000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30973 4879 28297 260486 206818 206818 6230 1 LMENMRNDIASHPPVEGSYAPR Unmodified 2483.1686 0.16856203 3039 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 0 0 1 By MS/MS 10 0 1 1 62.912 63.485 4 0.0017366 71870 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 20.333 17.324 10664000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10664000 30974 3039 28298 260487 206819;206820 206820 2 LMERYFDGNLEK Unmodified 1513.7235 0.72351415 5212 Q9Y4X5 ARIH1 E3 ubiquitin-protein ligase ARIH1 yes yes 0 0 1 By MS/MS 2 0 1 1 69.952 61.667 3 0.0072961 82270 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.754 38.915 26973000 26973000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30975 5212 28299 260488 206821 206821 1 LMERYFDGNLEK Oxidation (M) 1529.7184 0.71842877 5212 Q9Y4X5 ARIH1 E3 ubiquitin-protein ligase ARIH1 yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 56.544 50.493 3 0.019264 68953 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.121 51.243 29402000 23556000 0 5845800 0 0 0 0 0 0 0 0 0 0 0 0 30976 5212 28299 260489;260490 206822 206822 6613 0 LMEWTSLQNMR 2 Oxidation (M) 1439.6537 0.65372002 1251;1545 P29508;P48594 SERPINB3;SERPINB4 Serpin B3;Serpin B4 no no 0 2 0 By MS/MS 10 0 1 1 57.687 57.013 2 0.00063497 65973 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 69.915 59.391 27342000 0 0 0 27342000 0 0 0 0 0 0 0 0 0 0 0 30977 1251;1545 28300 260491 206823;206824 206824 1847;1848 2 LMEWTSLQNMR Oxidation (M) 1423.6588 0.6588054 1251;1545 P29508;P48594 SERPINB3;SERPINB4 Serpin B3;Serpin B4 no no 0 1 0 By MS/MS By matching 10 0 3 2 1 71.662 71.314 2 0.00012697 83190 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 107.57 77.011 21961000 0 0 0 20450000 0 0 0 1510800 0 0 0 0 0 0 0 30978 1251;1545 28300 260492;260493;260494 206825;206826 206826 1847;1848 2 LMEWTSLQNMR Unmodified 1407.6639 0.66389078 1251;1545 P29508;P48594 SERPINB3;SERPINB4 Serpin B3;Serpin B4 no no 0 0 0 By MS/MS 10 0 1 1 80.26 79.825 2 0.0072648 92707 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 65.305 50.154 3169100 0 0 0 3169100 0 0 0 0 0 0 0 0 0 0 0 30979 1251;1545 28300 260495 206827 206827 1 LMFSNCYK Unmodified 1061.4674 0.4674228 441;1189;2493 O60885;P25440;Q15059 BRD4;BRD2;BRD3 Bromodomain-containing protein 4;Bromodomain-containing protein 2;Bromodomain-containing protein 3 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 51.344 51.738 2 0.017826 57449 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.038 57.326 30179000 0 0 0 0 0 0 0 0 3246700 0 7504700 0 6956500 0 12471000 30980 441;1189;2493 28301 260496;260497;260498;260499 206828;206829;206830 206828 3 LMGCQDILENVPGR Unmodified 1600.7701 0.77014677 2604 Q16513 PKN2 Serine/threonine-protein kinase N2 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 76.315 76.458 2 0.00037962 88245 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 73.781 56.756 26428000 0 0 0 0 0 0 0 0 0 9057800 0 11449000 0 5921200 0 30981 2604 28302 260500;260501;260502 206831;206832 206831 2 LMGCQDILENVPGR Oxidation (M) 1616.7651 0.76506139 2604 Q16513 PKN2 Serine/threonine-protein kinase N2 yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 69.132 69.392 2 0.00019897 79796 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 78.908 53.249 23864000 0 0 0 0 0 0 0 0 0 0 0 14155000 9709000 0 0 30982 2604 28302 260503;260504 206833;206834 206833 4246 2 LMGDEPDLDPDINK Oxidation (M) 1586.7134 0.71340297 3701;164 O00507;Q93008 USP9Y;USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-Y;Probable ubiquitin carboxyl-terminal hydrolase FAF-X no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.25 3.77 2 2 4 2 2 1 1 1 1 59.119 56.242 2 2.7844E-09 71268 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.9 74.34 107150000 8045800 70067000 0 0 0 8191700 0 0 0 5244500 5419200 10182000 0 0 0 30983 164;3701 28303 260505;260506;260507;260508;260509;260510;260511;260512 206835;206836;206837;206838;206839;206840;206841;206842 206838 228 8 LMGDEPDLDPDINK Unmodified 1570.7185 0.71848835 3701;164 O00507;Q93008 USP9Y;USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-Y;Probable ubiquitin carboxyl-terminal hydrolase FAF-X no no 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 71.127 64.898 2 0.00050445 82921 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.618 73.611 196790000 7564500 189220000 0 0 0 0 0 0 0 0 0 0 0 0 0 30984 164;3701 28303 260513;260514;260515 206843;206844 206843 2 LMGDYLLR Unmodified 979.51609 0.51608756 385 O60232 SSSCA1 Sjoegren syndrome/scleroderma autoantigen 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 72.18 72.429 2 0.03688 82672 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.262 66.155 33053000 0 0 0 0 0 0 0 0 0 0 6365300 6817400 3835600 4861600 11173000 30985 385 28304 260516;260517;260518;260519;260520 206845 206845 0 LMGFASFDSTK Oxidation (M) 1218.5591 0.55907458 3562 Q8WVK2 SNRNP27 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.96 2.69 3 20 1 2 2 2 2 1 1 2 2 2 2 2 1 1 62.321 61.795 2 0.00099536 70587 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 72.243 65.931 209990000 0 26597000 7888100 14394000 17142000 15085000 11071000 5114200 17167000 18442000 20258000 28049000 15196000 5865300 7727800 30986 3562 28305 260521;260522;260523;260524;260525;260526;260527;260528;260529;260530;260531;260532;260533;260534;260535;260536;260537;260538;260539;260540;260541;260542;260543 206846;206847;206848;206849;206850;206851;206852;206853;206854;206855;206856;206857;206858;206859;206860;206861;206862;206863 206852 5051 9 LMGFASFDSTK Unmodified 1202.5642 0.56415996 3562 Q8WVK2 SNRNP27 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 75.857 75.286 2 0.00093347 87020 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 76.228 61.077 179730000 36934000 0 0 6479700 8165800 12766000 9837200 10413000 11484000 11519000 11880000 17885000 7483900 12280000 22602000 30987 3562 28305 260544;260545;260546;260547;260548;260549;260550;260551;260552;260553;260554;260555;260556 206864;206865;206866;206867;206868;206869;206870;206871;206872;206873;206874 206864 11 LMGLEALK Unmodified 873.49937 0.49937486 1548 P48643 CCT5 T-complex protein 1 subunit epsilon yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.039 71.113 2 0.010604 80710 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.116 34.505 445550000 0 0 0 14705000 13704000 39653000 17165000 18799000 13141000 37981000 48349000 49615000 33571000 42821000 116050000 30988 1548 28306 260557;260558;260559;260560;260561;260562;260563;260564;260565;260566;260567;260568 206875;206876;206877;206878;206879;206880;206881;206882 206877 8 LMGSILGVR Oxidation (M) 960.54264 0.54263666 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.239 56.365 2 0.013778 64904 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 52.716 30.585 117180000 0 0 0 6979100 6623800 7842800 8571700 9901000 6626800 10069000 10765000 14299000 17026000 9925400 8552500 30989 2556 28307 260569;260570;260571;260572;260573;260574;260575;260576;260577;260578;260579;260580 206883;206884;206885;206886;206887;206888;206889 206889 4198 7 LMGSILGVR Unmodified 944.54772 0.54772204 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 2 1 1 71.625 71.702 2 0.0042856 82396 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 87.323 45.82 102210000 0 0 0 4729400 5423600 7156200 5497400 8759600 6460100 7165900 9081100 10877000 11089000 7186100 18789000 30990 2556 28307 260581;260582;260583;260584;260585;260586;260587;260588;260589;260590;260591;260592;260593 206890;206891;206892;206893;206894;206895;206896;206897;206898;206899;206900 206891 11 LMHGILTEQK Unmodified 1168.6274 0.62742892 3401 Q8NBQ5 HSD17B11 Estradiol 17-beta-dehydrogenase 11 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 2 2 1 2 2 2 2 2 2 2 2 41.011 41.226 2;3 0.0016991 45882 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 121.05 104.85 391780000 0 0 0 4419500 18491000 32565000 15004000 41183000 28716000 40554000 46944000 51941000 34107000 31247000 46608000 30991 3401 28308 260594;260595;260596;260597;260598;260599;260600;260601;260602;260603;260604;260605;260606;260607;260608;260609;260610;260611;260612;260613;260614;260615 206901;206902;206903;206904;206905;206906;206907;206908;206909;206910;206911;206912;206913;206914 206910 9 LMHGILTEQK Oxidation (M) 1184.6223 0.62234354 3401 Q8NBQ5 HSD17B11 Estradiol 17-beta-dehydrogenase 11 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 26.793 27.091 3 0.0087113 29232 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 59.908 40.249 147200000 0 0 0 0 0 14209000 17259000 5134100 12810000 17772000 14216000 43433000 12019000 0 10344000 30992 3401 28308 260616;260617;260618;260619;260620;260621;260622;260623;260624 206915;206916;206917;206918 206917 4957 0 LMHLFTSGDCK Oxidation (M) 1323.5951 0.59514251 3586 Q8WXD5 GEMIN6 Gem-associated protein 6 yes yes 0 1 0 By MS/MS 2 0 1 1 45.294 38.302 3 0.020241 52678 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.154 30.965 17169000 17169000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30993 3586 28309 260625 206919 206919 5086 1 LMHLTSEELNPNPDK Unmodified 1736.8403 0.84033482 3975 Q96RS6 NUDCD1 NudC domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 59.218 58.552 3 5.5044E-07 65569 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.859 72.233 93111000 6855300 0 0 0 0 6106000 0 8786600 0 8022100 9649300 12098000 6205200 9032900 26356000 30994 3975 28310 260626;260627;260628;260629;260630;260631;260632;260633;260634 206920;206921;206922;206923;206924;206925;206926;206927 206923 8 LMHLTSEELNPNPDK Oxidation (M) 1752.8352 0.83524944 3975 Q96RS6 NUDCD1 NudC domain-containing protein 1 yes yes 0 1 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 45.709 45.704 3 0.0012792 50954 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 43.316 37.285 23461000 0 0 0 0 2768200 10925000 0 0 0 0 9768500 0 0 0 0 30995 3975 28310 260635;260636;260637 206928 206928 5460 1 LMHQAALLGQALQDSR Oxidation (M) 1766.9098 0.90975179 2641 Q16881 TXNRD1 Thioredoxin reductase 1, cytoplasmic yes yes 0 1 0 By matching By MS/MS 10 0 2 1 1 63.503 64.012 3 2.3079E-15 72490 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.43 89.156 46275000 0 0 0 0 0 0 0 0 0 0 0 13144000 0 0 33131000 30996 2641 28311 260638;260639 206929 206929 4295 1 LMHQAALLGQALQDSR Unmodified 1750.9148 0.91483717 2641 Q16881 TXNRD1 Thioredoxin reductase 1, cytoplasmic yes yes 0 0 0 By MS/MS 10 0 1 1 72.836 73.206 3 0.0048848 83749 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.546 21.265 24104000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24104000 30997 2641 28311 260640 206930 206930 1 LMHSSSLTNSSIPR Unmodified 1528.7668 0.76677595 2159 Q08499 PDE4D cAMP-specific 3',5'-cyclic phosphodiesterase 4D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 2 1 1 1 1 1 43.087 43.246 3 7.7954E-14 47136 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.803 73.477 126730000 0 0 0 6977200 4763700 14660000 8540600 8060600 7049200 9661100 16882000 13831000 0 9569400 26737000 30998 2159 28312 260641;260642;260643;260644;260645;260646;260647;260648;260649;260650;260651;260652 206931;206932;206933;206934;206935;206936;206937;206938;206939;206940;206941;206942;206943;206944 206935 14 LMHVAYEEFEK Oxidation (M) 1410.649 0.64895222 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.57 3.06 5 23 2 1 2 2 2 2 2 2 2 2 2 2 2 1 2 49.201 48.26 2;3 2.1309E-05 64021 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.83 100.91 490780000 117790000 76414000 81126000 13096000 12087000 21524000 13855000 16353000 15303000 23998000 15858000 27177000 23597000 8036500 24567000 30999 2392 28313 260653;260654;260655;260656;260657;260658;260659;260660;260661;260662;260663;260664;260665;260666;260667;260668;260669;260670;260671;260672;260673;260674;260675;260676;260677;260678;260679;260680 206945;206946;206947;206948;206949;206950;206951;206952;206953;206954;206955;206956;206957;206958;206959;206960 206948 3909 15 LMHVAYEEFEK Unmodified 1394.654 0.6540376 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.65 3.65 5 12 2 1 2 1 1 1 1 1 1 1 1 1 1 1 1 62.574 60.884 2;3 0.00018381 82734 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.04 86.805 557830000 403960000 41028000 28337000 2943800 1817800 9683600 3049700 4494200 5785800 6046900 5595600 10901000 2715600 7834800 23636000 31000 2392 28313 260681;260682;260683;260684;260685;260686;260687;260688;260689;260690;260691;260692;260693;260694;260695;260696;260697 206961;206962;206963;206964;206965;206966;206967;206968;206969;206970;206971 206966 10 LMIEMDGTENK Oxidation (M) 1295.5737 0.57373837 827 P06733 ENO1 Alpha-enolase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.21 3.87 1 34 5 26 11 26 3 2 3 1 2 1 3 3 3 2 3 3 47.766 44.671 2 3.269E-19 62680 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 183.47 145.91 16011000000 854140000 14066000000 56559000 41203000 9196700 3951100 2533200 3398800 0 13016000 151310000 178670000 7501300 111900000 511640000 31001 827 28314 260698;260699;260700;260701;260702;260703;260704;260705;260706;260707;260708;260709;260710;260711;260712;260713;260714;260715;260716;260717;260718;260719;260720;260721;260722;260723;260724;260725;260726;260727;260728;260729;260730;260731;260732;260733;260734;260735;260736;260737;260738;260739;260740;260741;260742;260743;260744;260745;260746;260747;260748;260749;260750;260751;260752;260753;260754;260755;260756;260757;260758;260759;260760;260761;260762;260763 206972;206973;206974;206975;206976;206977;206978;206979;206980;206981;206982;206983;206984;206985;206986;206987;206988;206989;206990;206991;206992;206993;206994;206995;206996;206997;206998;206999;207000;207001;207002;207003;207004;207005;207006;207007;207008;207009;207010;207011;207012;207013;207014;207015;207016;207017;207018;207019;207020;207021;207022;207023;207024;207025;207026;207027;207028;207029;207030;207031;207032;207033;207034;207035;207036;207037;207038;207039;207040;207041;207042;207043;207044;207045;207046;207047;207048 207022 998;999 70 LMIEMDGTENK 2 Oxidation (M) 1311.5687 0.56865299 827 P06733 ENO1 Alpha-enolase yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.3 3.32 29 19 16 13 31 4 3 1 1 2 1 2 1 1 2 2 33.545 30.419 2 3.7093E-16 33459 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 161.79 148.52 4484900000 367890000 3566600000 97035000 52415000 3875300 3166100 5345500 0 2296700 0 84925000 35942000 4538900 58358000 202520000 31002 827 28314 260764;260765;260766;260767;260768;260769;260770;260771;260772;260773;260774;260775;260776;260777;260778;260779;260780;260781;260782;260783;260784;260785;260786;260787;260788;260789;260790;260791;260792;260793;260794;260795;260796;260797;260798;260799;260800;260801;260802;260803;260804;260805;260806;260807;260808;260809;260810;260811;260812;260813;260814;260815;260816;260817;260818;260819;260820;260821;260822;260823;260824;260825;260826;260827 207049;207050;207051;207052;207053;207054;207055;207056;207057;207058;207059;207060;207061;207062;207063;207064;207065;207066;207067;207068;207069;207070;207071;207072;207073;207074;207075;207076;207077;207078;207079;207080;207081;207082;207083;207084;207085;207086;207087;207088;207089;207090;207091;207092;207093;207094;207095;207096;207097;207098;207099;207100;207101;207102;207103;207104;207105;207106;207107;207108;207109;207110;207111;207112;207113;207114 207085 998;999 61 LMIEMDGTENK Unmodified 1279.5788 0.57882375 827 P06733 ENO1 Alpha-enolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.64 3.69 1 11 3 7 4 9 2 1 1 1 1 1 2 61.471 58.152 2 1.2815E-19 67622 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 185.6 176.18 6112500000 445440000 4984700000 48747000 23703000 4668800 0 0 0 0 0 89345000 78343000 0 96377000 341140000 31003 827 28314 260828;260829;260830;260831;260832;260833;260834;260835;260836;260837;260838;260839;260840;260841;260842;260843;260844;260845;260846;260847;260848;260849 207115;207116;207117;207118;207119;207120;207121;207122;207123;207124;207125;207126;207127;207128;207129;207130;207131;207132;207133;207134;207135;207136;207137;207138;207139;207140;207141;207142 207130 27 LMISELDFQDSVFVLGFSEELNK Oxidation (M) 2675.304 0.30403568 3192 Q86X83 COMMD2 COMM domain-containing protein 2 yes yes 0 1 0 By MS/MS 3 0 1 1 100.56 96.985 3 6.8192E-11 101089 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 74.047 66.854 3653800 3653800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31004 3192 28315 260850 207143 207143 4815 1 LMITHIVNQNFK Oxidation (M) 1472.781 0.78096945 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 63.684 63.844 3 0.0027669 72678 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 47.361 27.72 73169000 0 0 0 0 2512900 10034000 0 0 10995000 10381000 7974800 12661000 0 0 18610000 31005 4634 28316 260851;260852;260853;260854;260855;260856;260857 207144;207145;207146;207147;207148;207149 207149 6034 3 LMITHIVNQNFK Unmodified 1456.7861 0.78605483 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 0 0 By MS/MS 10 0 1 1 70.828 71.263 3 0.0031744 81352 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.754 33.433 10635000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10635000 31006 4634 28316 260858 207150 207150 1 LMIWDTR Oxidation (M) 949.46914 0.46913736 2615;2169 Q09028;Q16576 RBBP4;RBBP7 Histone-binding protein RBBP4;Histone-binding protein RBBP7 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.874 59.983 2 0.025786 67135 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.176 56.745 684180000 0 0 0 36446000 31702000 45771000 43481000 37525000 37817000 52005000 86431000 85938000 56518000 64354000 106190000 31007 2169;2615 28317 260859;260860;260861;260862;260863;260864;260865;260866;260867;260868;260869;260870 207151;207152;207153;207154;207155 207152 5 LMIWDTR Unmodified 933.47422 0.47422274 2615;2169 Q09028;Q16576 RBBP4;RBBP7 Histone-binding protein RBBP4;Histone-binding protein RBBP7 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.208 70.284 2 0.023725 80495 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 84.244 63.689 485160000 0 0 0 15984000 15087000 25256000 15045000 28269000 16745000 33910000 47122000 69550000 30200000 42853000 145140000 31008 2169;2615 28317 260871;260872;260873;260874;260875;260876;260877;260878;260879;260880;260881;260882 207156;207157;207158;207159 207158 3 LMIWDTRSNTTSK Unmodified 1551.7715 0.77152697 2615 Q16576 RBBP7 Histone-binding protein RBBP7 yes yes 0 0 1 By MS/MS 2 0 1 1 67.474 59.179 3 0.00010466 79371 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.357 63.479 18116000 18116000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31009 2615 28318 260883 207160 207160 1 LMLAQDEER Oxidation (M) 1119.523 0.52302343 344 O43592 XPOT Exportin-T yes yes 0 1 0 By MS/MS 10 0 1 1 30.744 30.743 2 0.03309 33304 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 42.075 29.719 6932700 0 0 0 0 0 6932700 0 0 0 0 0 0 0 0 0 31010 344 28319 260884 207161 207161 1 LMLDGDRNK Unmodified 1060.5335 0.53352853 986 P13797 PLS3 Plastin-3 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 26.063 22.453 2 0.0036242 28295 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 134.06 100.32 58007000 0 31135000 26872000 0 0 0 0 0 0 0 0 0 0 0 0 31011 986 28320 260885;260886 207162;207163 207163 1 LMLDGDRNK Oxidation (M) 1076.5284 0.52844316 986 P13797 PLS3 Plastin-3 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2 0 6 2 2 2 19.489 15.875 2 0.021506 20351 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 125.81 96.241 169330000 64847000 44458000 60024000 0 0 0 0 0 0 0 0 0 0 0 0 31012 986 28320 260887;260888;260889;260890;260891;260892 207164;207165 207164 1 LMLLHSLPCFIEK Oxidation (M) 1615.8466 0.84660617 4561 Q9NQ89 C12orf4 Protein C12orf4 yes yes 0 1 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 50.656 50.952 2 0.007878 57573 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 42.348 8.4581 23332000 0 0 0 0 0 0 0 0 6635200 0 16697000 0 0 0 0 31013 4561 28321 260893;260894;260895 207166;207167 207167 5972 2 LMLQEPLEK Oxidation (M) 1115.5896 0.58964643 2682 Q49B96 COX19 Cytochrome c oxidase assembly protein COX19 yes yes 0 1 0 By MS/MS By MS/MS 6 4 1 1 1 1 58.981 55.785 2 0.011494 64001 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 55.676 27.458 21866000 0 19078000 0 0 2787600 0 0 0 0 0 0 0 0 0 0 31014 2682 28322 260896;260897 207168;207169 207169 4340 2 LMLQEPLEK Unmodified 1099.5947 0.59473181 2682 Q49B96 COX19 Cytochrome c oxidase assembly protein COX19 yes yes 0 0 0 By MS/MS 2 0 1 1 68.948 63.048 2 0.026697 80377 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.423 38.35 31629000 0 31629000 0 0 0 0 0 0 0 0 0 0 0 0 0 31015 2682 28322 260898 207170 207170 1 LMLQMNAK Unmodified 947.49324 0.49324362 4022 Q99547 MPHOSPH6 M-phase phosphoprotein 6 yes yes 0 0 0 By MS/MS 2 0 1 1 59.508 51.282 2 0.050164 69756 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.986 28.271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31016 4022 28323 260899 207171 207171 1 LMLSTSEYSQSPK Oxidation (M) 1485.7021 0.70211 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 52.457 47.113 2 3.7244E-22 60983 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 147.74 137.51 71120000 0 71120000 0 0 0 0 0 0 0 0 0 0 0 0 0 31017 2203 28324 260900;260901 207172 207172 3581 1 LMLSTSEYSQSPK Unmodified 1469.7072 0.70719538 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 6 4 2 2 1 1 1 1 55.74 53.531 2 5.239E-10 68247 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 146.71 136.71 171170000 0 151660000 989120 0 0 0 0 0 0 0 0 0 0 10371000 8157700 31018 2203 28324 260902;260903;260904;260905 207173;207174;207175 207173 3 LMMDFDGK Oxidation (M) 971.40924 0.40923922 2 A0AV96 RBM47 RNA-binding protein 47 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 38.481 38.537 2 0.043164 43324 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 43.218 27.997 14972000 0 0 0 0 2558500 0 4117900 0 0 0 0 0 4570000 3725400 0 31019 2 28325 260906;260907;260908;260909 207176 207176 1 LMMDPLSGQNR 2 Oxidation (M) 1292.5853 0.58530611 322 O43390 HNRNPR Heterogeneous nuclear ribonucleoprotein R yes yes 0 2 0 By MS/MS 10 0 1 1 33.9 33.952 2 0.0022258 36892 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 55.461 43.971 29626000 0 0 0 0 0 0 29626000 0 0 0 0 0 0 0 0 31020 322 28326 260910 207177 207177 406;407 1 LMMDPLSGQNR Unmodified 1260.5955 0.59547686 322 O43390 HNRNPR Heterogeneous nuclear ribonucleoprotein R yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 64.316 64.616 2 0.0091779 73110 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.013 45.311 11041000 0 0 0 0 0 0 1625300 0 0 0 0 0 0 1941800 7474400 31021 322 28326 260911;260912;260913 207178 207178 1 LMMDPLTGLNR 2 Oxidation (M) 1291.6264 0.62644264 407 O60506 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 58.691 58.794 2 0.0010959 67544 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 64.04 55.82 28311000 0 0 0 0 6096200 0 0 3913900 0 0 0 10182000 8119700 0 0 31022 407 28327 260914;260915;260916;260917;260918 207179;207180;207181;207182;207183;207184 207184 509;510 4 LMMEQSK Unmodified 865.40376 0.40375991 5011 Q9ULX6 AKAP8L A-kinase anchor protein 8-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 18.863 19.275 2 0.031266 18498 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.975 40.459 22550000 0 0 0 0 0 0 0 0 0 4057000 3204200 5224700 2657600 2558100 4848600 31023 5011 28328 260919;260920;260921;260922;260923;260924 207185 207185 1 LMMLQHK Oxidation (M) 915.46703 0.46702887 3101 Q7Z4S6 KIF21A Kinesin-like protein KIF21A yes yes 0 1 0 By MS/MS 10 0 1 1 7.5618 7.9207 2 0.037739 5866 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 56.255 6.943 11430000 0 0 0 0 0 0 0 0 0 0 11430000 0 0 0 0 31024 3101 28329 260925 207186 207186 1 LMNEDPMYSMYAK 2 Oxidation (M) 1623.6619 0.66190145 3659 Q92783 STAM Signal transducing adapter molecule 1 yes yes 0 2 0 By MS/MS 2 0 2 2 54.109 48.305 2 0.0027514 64029 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.363 83.346 44402000 0 44402000 0 0 0 0 0 0 0 0 0 0 0 0 0 31025 3659 28330 260926;260927 207187;207188 207188 5179;5180 2 LMNEDPMYSMYAK Oxidation (M) 1607.667 0.66698683 3659 Q92783 STAM Signal transducing adapter molecule 1 yes yes 0 1 0 By MS/MS 2 0 2 2 67.1 61.191 2 4.7366E-06 76092 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.08 83.812 93238000 0 93238000 0 0 0 0 0 0 0 0 0 0 0 0 0 31026 3659 28330 260928;260929 207189;207190;207191 207190 5179;5180 3 LMNEDPMYSMYAK Unmodified 1591.6721 0.6720722 3659 Q92783 STAM Signal transducing adapter molecule 1 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 74.232 72.014 2 0.0012941 89828 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.653 67.913 95323000 0 90680000 0 0 0 0 0 0 0 0 0 0 0 0 4642700 31027 3659 28330 260930;260931 207192;207193 207192 2 LMNEIEFR Unmodified 1050.5168 0.51681584 3134 Q86TC9 MYPN Myopalladin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 63.69 63.774 2 0.011504 72831 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 76.774 46.27 90862000 0 0 0 5866000 5371800 9856400 5725600 0 4144100 7652800 9604100 8517600 8578600 8255600 17289000 31028 3134 28331 260932;260933;260934;260935;260936;260937;260938;260939;260940;260941;260942 207194;207195;207196;207197 207196 4 LMNETTAVALAYGIYK Oxidation (M) 1772.9019 0.90187244 1337;686 P34932;O95757 HSPA4;HSPA4L Heat shock 70 kDa protein 4;Heat shock 70 kDa protein 4L no no 0 1 0 By matching By MS/MS By MS/MS By matching By MS/MS 10 0 8 2 2 1 1 2 82.565 82.721 2;3 6.2171E-05 95854 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 84.479 73.267 43029000 0 0 0 0 0 0 0 0 0 3358200 6596300 3170000 0 3080100 26824000 31029 1337;686 28332 260943;260944;260945;260946;260947;260948;260949;260950 207198;207199 207199 829 1 LMNIQQQLMK Unmodified 1245.6573 0.65734884 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 70.571 70.733 2 0.0033263 80568 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.899 52.744 20313000 0 0 0 0 0 3497700 0 0 0 4179700 0 0 2702500 2627200 7306400 31030 2193 28333 260951;260952;260953;260954;260955 207200;207201;207202 207201 3 LMNNHQLELAK Oxidation (M) 1325.6762 0.67617003 4537 Q9NP73 ALG13 Putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 36.811 31.859 3 2.0855E-06 39999 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 119.27 97.042 87314000 60275000 0 27039000 0 0 0 0 0 0 0 0 0 0 0 0 31031 4537 28334 260956;260957 207203;207204;207205 207205 5956 3 LMNNHQLELAK Unmodified 1309.6813 0.6812554 4537 Q9NP73 ALG13 Putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13 yes yes 0 0 0 By MS/MS 2 0 1 1 50.805 42.905 2 0.0067401 59304 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.804 68.389 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31032 4537 28334 260958 207206 207206 1 LMNQMNARL Oxidation (M) 1105.5372 0.5372337 2997 Q6YN16 HSDL2 Hydroxysteroid dehydrogenase-like protein 2 yes yes 0 1 1 By MS/MS 2 0 1 1 42.626 35.891 2 0.033277 49442 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.312 49.537 18255000 18255000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31033 2997 28335 260959 207207 207207 0 LMNVAINELNIK Unmodified 1370.7592 0.75917137 4077 Q99996 AKAP9 A-kinase anchor protein 9 yes yes 0 0 0 By MS/MS 2 0 1 1 86.678 78.548 2 0.007405 102374 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.417 65.186 9458600 9458600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31034 4077 28336 260960 207208 207208 1 LMNVIEK Oxidation (M) 861.46299 0.46298935 1348 P35250 RFC2 Replication factor C subunit 2 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 25.979 26.209 2 0.028997 27226 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 66.993 11.552 176450000 0 0 0 0 0 18200000 18497000 22706000 15116000 18869000 0 37735000 26045000 19279000 0 31035 1348 28337 260961;260962;260963;260964;260965;260966;260967;260968 207209;207210;207211;207212;207213;207214 207214 6 LMNVIEK Unmodified 845.46807 0.46807473 1348 P35250 RFC2 Replication factor C subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.666 41.843 2 0.023413 46718 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 86.472 33.836 439910000 0 0 0 21280000 25216000 41704000 23871000 34112000 24789000 40633000 53098000 49825000 35793000 37176000 52414000 31036 1348 28337 260969;260970;260971;260972;260973;260974;260975;260976;260977;260978;260979;260980 207215;207216;207217;207218;207219;207220;207221 207219 6 LMPALGVSVADQK Unmodified 1327.717 0.71697221 2935 Q6P4R8 NFRKB Nuclear factor related to kappa-B-binding protein yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 71.96 72.059 2 0.0010046 83327 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 66.595 55.105 37800000 0 0 0 0 3478300 3452300 2140300 4087600 2681200 3148800 5533300 5311500 3431800 4535200 0 31037 2935 28338 260981;260982;260983;260984;260985;260986;260987;260988;260989;260990 207222;207223;207224;207225;207226;207227;207228 207228 7 LMPALGVSVADQK Oxidation (M) 1343.7119 0.71188683 2935 Q6P4R8 NFRKB Nuclear factor related to kappa-B-binding protein yes yes 0 1 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 59.498 59.613 2 0.010195 67848 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 40.154 22.095 11483000 0 0 0 0 0 2310500 4302100 0 0 0 0 0 4870300 0 0 31038 2935 28338 260991;260992;260993 207229 207229 4571 1 LMPEIVATASK Unmodified 1158.6318 0.63184559 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.56 3.86 3 1 5 1 2 1 1 1 1 1 1 66.687 64.083 2 0.0074255 73628 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 54.066 39.397 809640000 36404000 623800000 27611000 19919000 22891000 34043000 22392000 22584000 0 0 0 0 0 0 0 31039 3641 28339 260994;260995;260996;260997;260998;260999;261000;261001;261002 207230;207231;207232;207233;207234;207235;207236;207237;207238;207239;207240;207241;207242;207243 207240 14 LMPEIVATASK Oxidation (M) 1174.6268 0.62676022 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 52.731 47.103 2 0.0070697 58546 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 69.276 40.114 417620000 13564000 381600000 22454000 0 0 0 0 0 0 0 0 0 0 0 0 31040 3641 28339 261003;261004;261005;261006;261007 207244;207245;207246;207247;207248;207249 207245 5150 6 LMPELPQYDQDNLK Unmodified 1702.8236 0.82362212 589 O94822 LTN1 E3 ubiquitin-protein ligase listerin yes yes 0 0 0 By MS/MS 2 0 1 1 79.912 75.2 2 3.3854E-54 93623 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 193.3 172.87 169910000 0 169910000 0 0 0 0 0 0 0 0 0 0 0 0 0 31041 589 28340 261008 207250;207251 207250 2 LMPGQDPEK Unmodified 1013.4852 0.48518136 3744 Q96AY3 FKBP10 Peptidyl-prolyl cis-trans isomerase FKBP10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 22.991 23.287 2 0.008436 23390 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.628 48.768 91693000 0 0 0 0 0 8153700 3452200 3413300 2022600 7824500 9853800 12086000 7230100 11846000 25811000 31042 3744 28341 261009;261010;261011;261012;261013;261014;261015;261016;261017;261018 207252 207252 1 LMPNLYPPETIADGVK Oxidation (M) 1772.9019 0.90187244 4305 Q9GZT4 SRR Serine racemase yes yes 0 1 0 By MS/MS 2 0 1 1 82.977 78.272 2 0.0044025 97131 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 56.551 42.131 32026000 0 32026000 0 0 0 0 0 0 0 0 0 0 0 0 0 31043 4305 28342 261019 207253 207253 5766 1 LMPNLYPPETIADGVK Unmodified 1756.907 0.90695782 4305 Q9GZT4 SRR Serine racemase yes yes 0 0 0 By MS/MS 2 0 1 1 88.262 83.42 2 7.7205E-07 103620 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.89 83.829 101740000 0 101740000 0 0 0 0 0 0 0 0 0 0 0 0 0 31044 4305 28342 261020 207254 207254 1 LMPPDSTTIEK Oxidation (M) 1246.6115 0.61150408 3701 Q93008 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 45.178 40.115 2 0.0091332 52460 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.19 42.035 74008000 0 74008000 0 0 0 0 0 0 0 0 0 0 0 0 0 31045 3701 28343 261021;261022 207255;207256 207255 5268 2 LMPPDSTTIEK Unmodified 1230.6166 0.61658946 3701 Q93008 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 50.926 44.745 2;3 0.0046042 59409 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.986 55.063 227310000 32595000 194720000 0 0 0 0 0 0 0 0 0 0 0 0 0 31046 3701 28343 261023;261024;261025 207257;207258;207259;207260;207261 207259 5 LMPPLIQK Unmodified 938.56231 0.56230947 215 O14787 TNPO2 Transportin-2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 72.968 66.006 2 0.028709 83945 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.374 53.188 169990000 77923000 92068000 0 0 0 0 0 0 0 0 0 0 0 0 0 31047 215 28344 261026;261027 207262 207262 1 LMPSNQQHK Oxidation (M) 1097.5288 0.52877751 28 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 0 1 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 5.6487 2.3224 2 0.0042339 4400 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.14 99.417 202470000 140590000 61879000 0 0 0 0 0 0 0 0 0 0 0 0 0 31048 28 28345 261028;261029;261030 207263;207264 207263 26 2 LMPSNQQHK Unmodified 1081.5339 0.53386288 28 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 9.0424 5.9569 2 0.0076751 10193 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 99.375 82.411 151920000 102670000 40373000 8885100 0 0 0 0 0 0 0 0 0 0 0 0 31049 28 28345 261031;261032;261033 207265;207266;207267 207266 3 LMPTADDDMARSCAK Oxidation (M) 1696.7219 0.72187594 5061 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 0 1 1 By MS/MS 3 0 1 1 32.335 27.855 3 0.027289 34874 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 44.294 37.713 3025600 0 3025600 0 0 0 0 0 0 0 0 0 0 0 0 0 31050 5061 28346 261034 207268 207268 0 LMQEREVPEYLNHVSK Oxidation (M) 1986.9833 0.98331066 2331 Q13619 CUL4A Cullin-4A yes yes 0 1 1 By MS/MS By MS/MS 2 0 4 2 2 56.653 50.601 3;4 0.00040631 68759 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.454 59.587 59483000 54169000 0 5314000 0 0 0 0 0 0 0 0 0 0 0 0 31051 2331 28347 261035;261036;261037;261038 207269;207270 207270 3801 0 LMQGDEICLR Oxidation (M) 1249.5795 0.57949245 3683 Q92900 UPF1 Regulator of nonsense transcripts 1 yes yes 0 1 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 47.321 47.314 2 0.0031313 53045 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 71.692 58.113 26420000 0 0 0 2663800 2970900 3910900 0 0 0 0 4066800 0 7604800 5202200 0 31052 3683 28348 261039;261040;261041;261042;261043;261044;261045;261046;261047;261048 207271;207272;207273;207274;207275;207276;207277;207278;207279 207276 5234 9 LMQGDEICLR Unmodified 1233.5846 0.58457783 3683 Q92900 UPF1 Regulator of nonsense transcripts 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 58.549 58.722 2 0.0098476 66755 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 57.047 25.29 7776000 0 0 0 0 0 0 0 7776000 0 0 0 0 0 0 0 31053 3683 28348 261049;261050;261051;261052 207280;207281;207282;207283 207281 4 LMQGFNEDMAIEAQQK 2 Oxidation (M) 1883.8393 0.83934854 228 O14929 HAT1 Histone acetyltransferase type B catalytic subunit yes yes 0 2 0 By MS/MS By matching 2.25 0.433 3 1 3 1 53.608 48.502 2 7.498E-19 63198 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.7 116.26 114130000 0 112830000 1303300 0 0 0 0 0 0 0 0 0 0 0 0 31054 228 28349 261053;261054;261055;261056 207284;207285 207285 299;300 1 LMQGFNEDMAIEAQQK Oxidation (M) 1867.8444 0.84443392 228 O14929 HAT1 Histone acetyltransferase type B catalytic subunit yes yes 0 1 0 By MS/MS By MS/MS 2.33 0.471 6 3 8 1 66.115 60.919 2;3 2.666E-91 76151 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 211.46 199.93 630640000 0 628010000 2629700 0 0 0 0 0 0 0 0 0 0 0 0 31055 228 28349 261057;261058;261059;261060;261061;261062;261063;261064;261065 207286;207287;207288;207289;207290;207291;207292;207293 207287 299;300 8 LMQGFNEDMAIEAQQK Unmodified 1851.8495 0.8495193 228 O14929 HAT1 Histone acetyltransferase type B catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.29 2.76 5 1 1 1 3 2 1 76.595 72.106 2;3 5.4159E-57 90497 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 219.92 200.95 858520000 8789600 841130000 8596600 0 0 0 0 0 0 0 0 0 0 0 0 31056 228 28349 261066;261067;261068;261069;261070;261071;261072 207294;207295;207296;207297;207298;207299;207300 207294 7 LMQLQHEK Unmodified 1025.5328 0.53280025 2598 Q16204 CCDC6 Coiled-coil domain-containing protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 6.8 3.92 4 6 2 1 1 1 1 1 1 1 1 22.949 21.289 2 0.0056658 31447 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 117.4 45.26 133310000 54806000 20406000 12466000 0 0 0 3235400 4479900 1939000 6546500 0 0 0 9045000 20384000 31057 2598 28350 261073;261074;261075;261076;261077;261078;261079;261080;261081;261082 207301;207302;207303;207304;207305;207306;207307;207308 207306 8 LMQLQHEK Oxidation (M) 1041.5277 0.52771487 2598 Q16204 CCDC6 Coiled-coil domain-containing protein 6 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 12.507 9.7274 2 0.020488 12504 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 82.241 33.737 48985000 0 25965000 23020000 0 0 0 0 0 0 0 0 0 0 0 0 31058 2598 28350 261083;261084 207309;207310 207310 2 LMQLVDHR Oxidation (M) 1026.528 0.52804923 3670 Q92841 DDX17 Probable ATP-dependent RNA helicase DDX17 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 21.837 22.076 2 0.025927 23068 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 50.703 15.503 101680000 0 0 0 0 4991900 9012700 7398000 0 5405300 10180000 13377000 19370000 14824000 0 17117000 31059 3670 28351 261085;261086;261087;261088;261089;261090;261091;261092;261093 207311 207311 1 LMQLVDHR Unmodified 1010.5331 0.5331346 3670 Q92841 DDX17 Probable ATP-dependent RNA helicase DDX17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 38.457 38.514 2 0.0087714 43173 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 85.064 67.028 88759000 0 0 0 6821700 8115400 10300000 10666000 7170500 8455600 0 10368000 0 13740000 13122000 0 31060 3670 28351 261094;261095;261096;261097;261098;261099;261100;261101;261102;261103 207312;207313;207314;207315;207316;207317;207318 207318 6 LMQQLLESDK Oxidation (M) 1219.6118 0.61183843 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.125 39.306 2 0.00060092 43874 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 114.84 78 245530000 0 0 0 15907000 14388000 24371000 21716000 15320000 14979000 23491000 22632000 30603000 19924000 19911000 22290000 31061 3641 28352 261104;261105;261106;261107;261108;261109;261110;261111;261112;261113;261114;261115 207319;207320;207321;207322;207323;207324;207325;207326;207327;207328;207329;207330 207319 5151 12 LMQQLLESDK Unmodified 1203.6169 0.61692381 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.319 59.429 2 0.00050347 68723 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 139.02 93.302 430440000 0 0 0 21613000 28058000 38351000 27246000 33600000 22226000 39946000 43187000 50331000 35409000 36231000 54245000 31062 3641 28352 261116;261117;261118;261119;261120;261121;261122;261123;261124;261125;261126;261127 207331;207332;207333;207334;207335;207336;207337;207338;207339;207340;207341;207342 207341 12 LMQQQQEVAGLSK Oxidation (M) 1474.745 0.74497787 261 O15164 TRIM24 Transcription intermediary factor 1-alpha yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 34.643 34.113 2 2.7467E-22 42799 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 149.23 118.67 88340000 0 22872000 0 0 4675400 5304100 5003200 4783700 5177100 6623100 7042700 5877700 6813300 5755400 8412500 31063 261 28353 261128;261129;261130;261131;261132;261133;261134;261135;261136;261137;261138;261139;261140;261141 207343;207344;207345;207346;207347;207348;207349;207350;207351;207352;207353;207354 207346 350 12 LMQQQQEVAGLSK Unmodified 1458.7501 0.75006325 261 O15164 TRIM24 Transcription intermediary factor 1-alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 43.59 43.685 2 3.0825E-25 48681 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 159.83 128.33 71918000 0 0 0 4102500 3671000 6886000 4623500 7353800 0 9259500 11447000 0 0 10044000 14531000 31064 261 28353 261142;261143;261144;261145;261146;261147;261148;261149;261150 207355;207356;207357;207358;207359;207360;207361;207362;207363;207364;207365;207366 207362 12 LMQVVPQET Unmodified 1043.5321 0.53213155 2059 Q01650 SLC7A5 Large neutral amino acids transporter small subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.806 60.91 2 0.031671 69526 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 47.657 28.021 58734000 0 0 0 3289400 3850000 3728400 3426300 5766400 2258500 4876000 6379400 5161000 5836100 6967100 7195700 31065 2059 28354 261151;261152;261153;261154;261155;261156;261157;261158;261159;261160;261161;261162 207367 207367 1 LMRFDDPLLGPR Oxidation (M) 1444.7497 0.74966932 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 1 1 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 70.145 70.375 3 0.0027585 80240 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.423 41.512 34029000 0 0 0 0 0 0 2249100 1947100 0 5597900 3362600 5399000 3986300 2611500 8875900 31066 4819 28355 261163;261164;261165;261166;261167;261168;261169;261170 207368;207369 207369 6186 1 LMRQDIDTQK Unmodified 1246.634 0.63397086 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.726 19.927 3 0.028738 19312 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 54.259 28.217 260350000 0 0 0 14815000 13877000 18167000 17622000 14370000 12229000 23200000 32133000 32348000 22378000 20605000 38611000 31067 3676 28356 261171;261172;261173;261174;261175;261176;261177;261178;261179;261180;261181;261182 207370;207371 207371 1 LMSAISK Oxidation (M) 764.41023 0.4102255 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.08 2.5 2 1 22 1 1 1 2 2 2 1 1 2 2 2 2 2 2 2 14.083 13.824 2 0.015392 12841 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.123 40.362 938710000 446190000 57900000 86069000 15523000 14086000 43202000 13181000 6282200 10936000 45539000 36098000 49475000 23090000 28185000 62959000 31068 1565 28357 261183;261184;261185;261186;261187;261188;261189;261190;261191;261192;261193;261194;261195;261196;261197;261198;261199;261200;261201;261202;261203;261204;261205;261206;261207 207372;207373;207374;207375;207376;207377;207378;207379;207380;207381;207382 207374 2497 11 LMSANASDLPLNIECFMNDLDVSSK Unmodified 2783.2816 0.28160245 686 O95757 HSPA4L Heat shock 70 kDa protein 4L yes yes 0 0 0 By MS/MS 2 0 2 2 101.44 96.724 3 6.6883E-120 119584 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.32 116.6 59565000 0 59565000 0 0 0 0 0 0 0 0 0 0 0 0 0 31069 686 28358 261208;261209 207383;207384 207384 2 LMSGVENSGK Unmodified 1020.491 0.49099502 2559 Q15650 TRIP4 Activating signal cointegrator 1 yes yes 0 0 0 By MS/MS 2 0 1 1 21.628 17.745 2 0.003406 23627 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.358 38.311 28340000 0 28340000 0 0 0 0 0 0 0 0 0 0 0 0 0 31070 2559 28359 261210 207385;207386 207386 2 LMSLANSSEGK Oxidation (M) 1151.5492 0.54923818 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS 9.62 1.7 1 20 1 2 2 2 2 2 1 1 2 1 2 1 2 21.047 20.959 2 0.00015389 20968 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 106.18 89.975 147240000 0 14095000 0 19606000 12721000 14460000 15133000 9435200 5819500 5546500 18332000 7274800 12180000 7189900 5442600 31071 2556 28360 261211;261212;261213;261214;261215;261216;261217;261218;261219;261220;261221;261222;261223;261224;261225;261226;261227;261228;261229;261230;261231 207387;207388;207389;207390;207391;207392;207393;207394;207395;207396;207397;207398 207393 4199 9 LMSLANSSEGK Unmodified 1135.5543 0.55432356 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 36.204 35.902 2 0.00028318 38320 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 93.111 71.26 259750000 0 36209000 0 11339000 13455000 14354000 15947000 16496000 14632000 18724000 22220000 0 37719000 26800000 31851000 31072 2556 28360 261232;261233;261234;261235;261236;261237;261238;261239;261240;261241;261242;261243 207399;207400;207401;207402;207403;207404;207405;207406;207407;207408;207409;207410 207407 12 LMSMPVMTVDYSK Unmodified 1500.7026 0.70264405 4254 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 yes yes 0 0 0 By MS/MS 2 0 1 1 85.203 80.459 2 0.0052773 100037 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.474 58.006 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31073 4254 28361 261244 207411 207411 1 LMSNLDSNR Oxidation (M) 1064.4921 0.49205765 1206 P26447 S100A4 Protein S100-A4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 1 2 2 2 2 2 2 16.162 16.341 2 0.0021557 14535 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 93.178 77.516 1567100000 0 0 0 75192000 69272000 74567000 93438000 78736000 21892000 107120000 204420000 206070000 114340000 170190000 351870000 31074 1206 28362 261245;261246;261247;261248;261249;261250;261251;261252;261253;261254;261255;261256;261257;261258;261259;261260;261261;261262;261263;261264;261265;261266;261267 207412;207413;207414;207415;207416;207417;207418;207419;207420;207421;207422;207423;207424;207425;207426;207427;207428;207429;207430;207431;207432 207425 1761 20 LMSNLDSNR Unmodified 1048.4971 0.49714303 1206 P26447 S100A4 Protein S100-A4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.075 28.269 2 0.0036305 29138 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.12 83.153 1701600000 0 0 0 88791000 89713000 88458000 101550000 116920000 43597000 112540000 243010000 138570000 78238000 148430000 451760000 31075 1206 28362 261268;261269;261270;261271;261272;261273;261274;261275;261276;261277;261278;261279 207433;207434;207435;207436;207437;207438;207439;207440;207441;207442;207443;207444 207436 12 LMSSNSTDLPLNIECFMNDK 2 Oxidation (M) 2360.0334 0.033433257 3633 Q92598 HSPH1 Heat shock protein 105 kDa yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.17 3.85 2 1 3 2 1 1 1 1 85.376 83.715 3 6.3769E-07 103400 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.607 64.08 224480000 0 184180000 4354200 0 0 0 0 0 0 0 10286000 8299300 0 0 17359000 31076 3633 28363 261280;261281;261282;261283;261284;261285 207445;207446;207447;207448;207449 207445 5134;5135 5 LMSSNSTDLPLNIECFMNDK Oxidation (M) 2344.0385 0.038518635 3633 Q92598 HSPH1 Heat shock protein 105 kDa yes yes 0 1 0 By MS/MS By MS/MS 2.4 0.49 3 2 4 1 92.895 89.162 2;3 2.8495E-59 106495 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 139.6 134.12 407450000 0 405640000 1803700 0 0 0 0 0 0 0 0 0 0 0 0 31077 3633 28363 261286;261287;261288;261289;261290 207450;207451;207452;207453 207450 5134;5135 4 LMSSNSTDLPLNIECFMNDK Unmodified 2328.0436 0.043604013 3633 Q92598 HSPH1 Heat shock protein 105 kDa yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 96.759 92.734 3 3.5985E-86 114636 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 154.55 151.41 214670000 0 214670000 0 0 0 0 0 0 0 0 0 0 0 0 0 31078 3633 28363 261291;261292 207454 207454 1 LMSTVDPK Oxidation (M) 905.45282 0.4528186 2115 Q05519 SRSF11 Serine/arginine-rich splicing factor 11 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 16.327 16.463 2 0.028266 16199 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 49.442 23.991 99683000 0 0 0 0 11968000 15613000 0 0 13957000 18488000 0 0 0 20178000 19480000 31079 2115 28364 261293;261294;261295;261296;261297;261298 207455 207455 1 LMSTVDPK Unmodified 889.4579 0.45790397 2115 Q05519 SRSF11 Serine/arginine-rich splicing factor 11 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 27.377 27.594 2 0.025168 29436 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 58.917 8.2855 439440000 0 0 0 0 31416000 39477000 38082000 40168000 32247000 48924000 62573000 69942000 0 0 76614000 31080 2115 28364 261299;261300;261301;261302;261303;261304;261305;261306;261307 207456 207456 1 LMTDTINEPILLCR Unmodified 1687.8637 0.8637128 366 O43776 NARS Asparagine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS 10 0 1 1 83.163 83.354 3 0.0026038 96225 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.431 68.028 3526100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3526100 31081 366 28365 261308 207457 207457 0 LMTEILGR Unmodified 931.51609 0.51608756 369 O43809 NUDT21 Cleavage and polyadenylation specificity factor subunit 5 yes yes 0 0 0 By MS/MS 10 0 1 1 62.416 62.989 2 0.0099233 71208 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.32 25.23 30238000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30238000 31082 369 28366 261309 207458 207458 1 LMTGDTYTAHAGAK Unmodified 1435.6766 0.67656396 1462;731 P00519;P42684 ABL1;ABL2 Tyrosine-protein kinase ABL1;Abelson tyrosine-protein kinase 2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 28.889 29.151 3 0.00024149 31900 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 58.831 42.694 181080000 0 0 0 0 11600000 0 12681000 23982000 9598300 26237000 20982000 18980000 16732000 16429000 23855000 31083 731;1462 28367 261310;261311;261312;261313;261314;261315;261316;261317;261318;261319 207459;207460;207461;207462;207463;207464;207465;207466;207467;207468;207469;207470;207471;207472;207473 207473 15 LMTGDTYTAHAGAK Oxidation (M) 1451.6715 0.67147858 1462;731 P00519;P42684 ABL1;ABL2 Tyrosine-protein kinase ABL1;Abelson tyrosine-protein kinase 2 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 20.757 21.089 3 0.0018922 21386 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 43.305 34.018 38502000 0 0 0 8636900 0 0 0 0 0 0 13485000 10664000 0 5716200 0 31084 731;1462 28367 261320;261321;261322;261323 207474 207474 883 1 LMTGSETPSK Unmodified 1049.5063 0.50631073 2818 Q5VUA4 ZNF318 Zinc finger protein 318 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 18.823 18.787 2 0.011593 18825 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 53.968 10.844 4290400 0 0 0 0 2547600 0 0 0 1742800 0 0 0 0 0 0 31085 2818 28368 261324;261325;261326 207475;207476;207477 207476 3 LMTHVDK Oxidation (M) 858.42694 0.4269382 193 O14617 AP3D1 AP-3 complex subunit delta-1 yes yes 0 1 0 By MS/MS By matching By MS/MS 2 0 3 1 1 1 8.8106 5.725 2 0.045081 7433 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 76.035 39.478 72140000 24068000 23743000 24329000 0 0 0 0 0 0 0 0 0 0 0 0 31086 193 28369 261327;261328;261329 207478 207478 1 LMTIMDSMNDQELDSTDGAK 3 Oxidation (M) 2261.9338 0.93377879 1826 P61011 SRP54 Signal recognition particle 54 kDa protein yes yes 0 3 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.61 1.6 1 17 1 1 3 1 2 2 2 1 2 2 1 47.505 47.398 2;3 5.274E-21 53643 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 96.591 93.805 105890000 0 2913900 0 0 8828200 18655000 7468000 8191700 8365800 15239000 8394700 0 16296000 7473300 4059200 31087 1826 28370 261330;261331;261332;261333;261334;261335;261336;261337;261338;261339;261340;261341;261342;261343;261344;261345;261346;261347 207479;207480;207481;207482;207483;207484 207484 2963;2964;2965 6 LMTIMDSMNDQELDSTDGAK Oxidation (M) 2229.9439 0.94394955 1826 P61011 SRP54 Signal recognition particle 54 kDa protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.72 2 13 2 1 1 1 2 1 3 1 1 2 71.372 70.699 2 1.9473E-218 90068 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 245.03 240.6 120270000 0 67227000 0 2449900 0 4413300 2927900 11761000 0 3975500 11752000 0 3180800 4032900 8554100 31088 1826 28370 261348;261349;261350;261351;261352;261353;261354;261355;261356;261357;261358;261359;261360;261361;261362 207485;207486;207487;207488;207489;207490;207491;207492;207493;207494;207495;207496;207497;207498;207499 207489 2963;2964;2965 15 LMTIMDSMNDQELDSTDGAK Unmodified 2213.949 0.94903493 1826 P61011 SRP54 Signal recognition particle 54 kDa protein yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 80.169 79.141 2 5.2285E-288 91506 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 241.51 236.88 188580000 0 146880000 0 0 0 4997300 0 8167200 3621700 0 6273300 0 0 0 18636000 31089 1826 28370 261363;261364;261365;261366;261367;261368;261369;261370;261371 207500;207501;207502;207503;207504;207505;207506 207502 7 LMTIMDSMNDQELDSTDGAK 2 Oxidation (M) 2245.9389 0.93886417 1826 P61011 SRP54 Signal recognition particle 54 kDa protein yes yes 0 2 0 By MS/MS 2 0 1 1 63.369 57.461 2 8.4114E-29 73753 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.64 97.483 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31090 1826 28370 261372 207507 207507 2963;2964;2965 1 LMTQAQLEEATR Unmodified 1389.6922 0.69221402 1997 P82650 MRPS22 28S ribosomal protein S22, mitochondrial yes yes 0 0 0 By MS/MS 10 0 1 1 53.941 53.414 2 0.03835 61001 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 59.426 45.219 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31091 1997 28371 261373 207508 207508 1 LMTQAQLEEATRQAVEAAK Unmodified 2087.0681 0.068102925 1997 P82650 MRPS22 28S ribosomal protein S22, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 84.232 80.614 3 5.6187E-32 100370 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.19 97.977 52968000 0 49534000 3433600 0 0 0 0 0 0 0 0 0 0 0 0 31092 1997 28372 261374;261375 207509 207509 1 LMTSSTNNWVLIK Oxidation (M) 1521.7861 0.78611441 193 O14617 AP3D1 AP-3 complex subunit delta-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 77.48 75.393 2 0.0018376 96773 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.974 59.104 24161000 10677000 0 0 3744300 0 0 0 4331700 0 0 0 0 5407300 0 0 31093 193 28373 261376;261377;261378;261379 207510;207511 207510 264 2 LMTSSTNNWVLIK Unmodified 1505.7912 0.79119978 193 O14617 AP3D1 AP-3 complex subunit delta-1 yes yes 0 0 0 By MS/MS 2 0 1 1 86.122 77.991 2 0.0020929 101686 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.89 81.26 6690500 6690500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31094 193 28373 261380 207512 207512 1 LMTTGNNTVR Unmodified 1105.555 0.55499226 4443 Q9H832 UBE2Z Ubiquitin-conjugating enzyme E2 Z yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.212 22.417 2 0.018376 23269 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 48.423 10.185 181060000 0 0 0 7968200 7563300 16650000 8545700 9674000 6174900 19157000 20757000 24170000 17977000 12995000 29431000 31095 4443 28374 261381;261382;261383;261384;261385;261386;261387;261388;261389;261390;261391;261392 207513;207514;207515;207516;207517;207518 207513 2 LMTTNEIQSNIYT Unmodified 1526.7287 0.72865911 663 O95456 PSMG1 Proteasome assembly chaperone 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 7.75 3.9 1 3 1 1 1 1 81.372 82.855 2 4.212E-21 89482 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 142.43 130.83 37370000 20149000 0 0 0 0 0 0 2271100 0 0 0 0 0 4138500 10811000 31096 663 28375 261393;261394;261395;261396 207519;207520 207520 2 LMTTNEIQSNIYT Oxidation (M) 1542.7236 0.72357373 663 O95456 PSMG1 Proteasome assembly chaperone 1 yes yes 0 1 0 By MS/MS By MS/MS 1 0 2 1 1 102.78 105.86 2 1.8096E-06 94896 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 105.4 90.131 20188000 5410200 14778000 0 0 0 0 0 0 0 0 0 0 0 0 0 31097 663 28375 261397;261398 207521;207522 207522 805 2 LMVALAK Oxidation (M) 760.4517 0.45169638 840 P07355;A6NMY6 ANXA2;ANXA2P2 Annexin A2;Putative annexin A2-like protein yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.65 3.53 5 3 18 2 4 2 1 1 1 1 1 1 2 2 2 2 2 2 42.392 40.996 2 0.015438 46551 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 85.306 47.892 1230900000 93253000 433830000 134500000 84208000 21450000 18952000 26820000 35929000 17005000 49473000 61077000 84095000 60247000 47180000 62911000 31098 840 28376 261399;261400;261401;261402;261403;261404;261405;261406;261407;261408;261409;261410;261411;261412;261413;261414;261415;261416;261417;261418;261419;261420;261421;261422;261423;261424 207523;207524;207525;207526;207527;207528;207529;207530;207531;207532;207533;207534;207535;207536;207537;207538;207539 207538 1031 17 LMVEESDLLGQLK Oxidation (M) 1489.7698 0.76979564 4881 Q9UGJ1 TUBGCP4 Gamma-tubulin complex component 4 yes yes 0 1 0 By MS/MS 2 0 1 1 85.382 80.612 2 1.1024E-33 100176 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 173.32 133.32 44262000 0 44262000 0 0 0 0 0 0 0 0 0 0 0 0 0 31099 4881 28377 261425 207540;207541 207540 6240 2 LMVELSK Oxidation (M) 834.45209 0.45209032 1548 P48643 CCT5 T-complex protein 1 subunit epsilon yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.3 3.22 4 1 18 1 3 1 2 2 2 1 1 1 2 1 2 2 2 41.22 40.174 2 0.016548 50631 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.72 18.928 2710300000 125830000 1666700000 69600000 52981000 50428000 129460000 41166000 21372000 33936000 129570000 67476000 144770000 86212000 90734000 0 31100 1548 28378 261426;261427;261428;261429;261430;261431;261432;261433;261434;261435;261436;261437;261438;261439;261440;261441;261442;261443;261444;261445;261446;261447;261448 207542;207543;207544;207545;207546;207547;207548;207549;207550;207551;207552;207553;207554;207555;207556;207557 207545 2464 16 LMVELSK Unmodified 818.45718 0.45717569 1548 P48643 CCT5 T-complex protein 1 subunit epsilon yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 50.619 49.927 2 0.023899 54978 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.262 7.3957 1727900000 226910000 0 0 74296000 0 125250000 0 0 74427000 180330000 210670000 241760000 140590000 0 453650000 31101 1548 28378 261449;261450;261451;261452;261453;261454;261455;261456;261457 207558;207559;207560;207561;207562;207563;207564;207565;207566 207560 9 LMVMEIR 2 Oxidation (M) 922.46161 0.46160914 2127 Q06323 PSME1 Proteasome activator complex subunit 1 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 38.199 38.327 2 0.02639 42562 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 47.849 15.378 64101000 0 0 0 3461700 2675700 5532800 5973700 4347500 2990900 6610900 7549800 0 6234200 7258800 11465000 31102 2127 28379 261458;261459;261460;261461;261462;261463;261464;261465;261466;261467;261468 207567 207567 1 LMVPLLK Oxidation (M) 828.5143 0.51429664 149;409 O00410;O60518 IPO5;RANBP6 Importin-5;Ran-binding protein 6 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.722 73.788 2 0.017918 84865 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 77.72 30.674 456520000 0 0 0 20215000 19268000 68224000 30760000 22133000 18614000 52715000 41861000 40341000 34774000 41109000 66504000 31103 149;409 28380 261469;261470;261471;261472;261473;261474;261475;261476;261477;261478;261479;261480 207568;207569;207570;207571;207572;207573;207574;207575;207576;207577;207578;207579;207580 207568 206 13 LMVPLLK Unmodified 812.51938 0.51938202 149;409 O00410;O60518 IPO5;RANBP6 Importin-5;Ran-binding protein 6 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 80.609 79.491 2 0.023434 91698 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 85.306 20.744 976340000 342440000 253380000 32054000 9275400 12338000 49360000 14777000 20072000 9996900 27767000 28248000 28664000 15261000 32525000 100180000 31104 149;409 28380 261481;261482;261483;261484;261485;261486;261487;261488;261489;261490;261491;261492;261493;261494;261495;261496 207581;207582;207583;207584;207585;207586;207587;207588;207589;207590;207591;207592;207593 207581 13 LMVQAVNQR Unmodified 1057.5702 0.57024839 3581 Q8WX93 PALLD Palladin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.064 37.244 2 0.003469 41872 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 94.407 70.435 286920000 0 0 0 14693000 14475000 14864000 18490000 19048000 14598000 29621000 27528000 32335000 14749000 25990000 60533000 31105 3581 28381 261497;261498;261499;261500;261501;261502;261503;261504;261505;261506;261507;261508 207594;207595;207596;207597;207598;207599;207600;207601;207602;207603;207604;207605;207606 207605 13 LMVQAVNQR Oxidation (M) 1073.5652 0.56516301 3581 Q8WX93 PALLD Palladin yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 2 1 1 2 2 2 2 1 1 29.554 29.651 2 0.0022429 31050 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 105.39 65.288 103740000 0 0 0 7435100 6683300 8308400 9377800 7517100 9186300 26189000 0 0 8811700 0 20233000 31106 3581 28381 261509;261510;261511;261512;261513;261514;261515;261516;261517;261518;261519;261520;261521;261522;261523 207607;207608;207609;207610;207611;207612;207613;207614;207615;207616;207617;207618 207610 5079 9 LMWIPDTK Unmodified 1002.5208 0.52083858 1864 P61962 DCAF7 DDB1- and CUL4-associated factor 7 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 76.093 76.182 2 0.009506 87299 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.671 82.671 37952000 0 0 0 1726600 0 0 2277200 0 0 5147700 4841100 6847500 0 5544700 11567000 31107 1864 28382 261524;261525;261526;261527;261528;261529;261530 207619;207620;207621;207622 207620 4 LMWIPDTK Oxidation (M) 1018.5158 0.5157532 1864 P61962 DCAF7 DDB1- and CUL4-associated factor 7 yes yes 0 1 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS 10 0 20 2 2 1 2 2 2 1 2 1 2 2 1 66.075 66.125 2 0.021491 75975 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 54.205 41.998 78391000 0 0 0 7605300 4494800 3691300 6299300 7337900 6206200 4638300 9782100 5951100 7253500 9786900 5344800 31108 1864 28382 261531;261532;261533;261534;261535;261536;261537;261538;261539;261540;261541;261542;261543;261544;261545;261546;261547;261548;261549;261550 207623;207624;207625;207626;207627;207628;207629 207627 7 LMYDNTSEMPGK Oxidation (M) 1400.5952 0.59520209 3246 Q8IWV7 UBR1 E3 ubiquitin-protein ligase UBR1 yes yes 0 1 0 By MS/MS 2 0 1 1 42.467 37.32 2 0.0058225 48613 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.509 62.131 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31109 3246 28383 261551 207630 207630 4856 1 LNAAHYSTGK Unmodified 1060.5302 0.53015772 2274 Q13356 PPIL2 Peptidyl-prolyl cis-trans isomerase-like 2 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 12.673 12.932 2 0.024578 11364 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.863 25.769 7723700 0 0 0 0 0 0 1105500 0 0 1288400 1078100 0 0 2611300 1640500 31110 2274 28384 261552;261553;261554;261555;261556 207631 207631 1 LNAALATPAK Unmodified 968.56548 0.56548059 4641 Q9NU22 MDN1 Midasin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 36.036 36.58 2 0.015574 40453 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 50.034 25.139 15968000 0 0 0 0 0 0 0 0 0 4605700 0 7093800 0 0 4268000 31111 4641 28385 261557;261558;261559;261560;261561 207632;207633;207634 207632 3 LNAEIEELTASAR Unmodified 1415.7256 0.72562264 5148 Q9Y3B1 SLMO2 Protein slowmo homolog 2 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 72.433 72.524 2 0.00018026 83303 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 97.214 79.155 48843000 0 0 0 0 4950800 5109100 4920900 0 0 7817700 7606400 0 0 8511200 9927400 31112 5148 28386 261562;261563;261564;261565;261566;261567;261568 207635;207636;207637;207638;207639;207640 207636 6 LNAFGNAFLNR Unmodified 1235.6411 0.64110515 4403 Q9H4M9 EHD1 EH domain-containing protein 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 76.754 76.531 2 0.0016085 88278 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 118.74 94.54 13565000 0 0 0 4884100 3246000 0 5435100 0 0 0 0 0 0 0 0 31113 4403 28387 261569;261570;261571;261572;261573;261574;261575;261576;261577 207641;207642;207643;207644;207645;207646;207647;207648;207649 207647 9 LNAGYSNTATEWSQPR Unmodified 1793.8333 0.83327561 535 O75717 WDHD1 WD repeat and HMG-box DNA-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 56.347 56.013 2 2.2686E-31 63086 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 178.32 164.52 100750000 0 18159000 0 3407800 3049600 5513400 6008000 7277300 4029900 8248500 9243900 10787000 7197100 6400000 11430000 31114 535 28388 261578;261579;261580;261581;261582;261583;261584;261585;261586;261587;261588;261589;261590 207650;207651;207652;207653;207654;207655;207656;207657;207658;207659;207660;207661;207662;207663;207664;207665 207656 16 LNAILFK Unmodified 817.50617 0.5061748 417 O60610 DIAPH1 Protein diaphanous homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.861 67.942 2 0.015564 77963 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 117.7 25.006 385100000 0 0 0 20480000 20426000 51259000 32206000 26405000 20702000 36571000 32990000 34912000 35398000 35361000 38385000 31115 417 28389 261591;261592;261593;261594;261595;261596;261597;261598;261599;261600;261601;261602 207666;207667;207668;207669;207670;207671;207672;207673;207674;207675;207676;207677;207678 207673 13 LNAIYQNNLTK Unmodified 1290.6932 0.6932003 724 P00390 GSR Glutathione reductase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 49.83 50.401 2 0.00022772 55945 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 131.45 103.97 47134000 0 0 0 0 0 0 0 0 0 0 14342000 0 0 0 32791000 31116 724 28390 261603;261604 207679;207680 207679 2 LNALDLEK Unmodified 914.5073 0.50729701 150 O00418 EEF2K Eukaryotic elongation factor 2 kinase yes yes 0 0 0 By MS/MS 10 0 1 1 51.946 52.226 2 0.023704 59167 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 60.118 24.763 6881700 0 0 0 0 0 0 0 0 0 0 0 0 6881700 0 0 31117 150 28391 261605 207681 207681 1 LNANVMHGK Unmodified 982.50183 0.50183448 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 8 3.46 3 9 1 1 1 1 1 1 1 1 1 1 1 1 19.711 18.914 2 0.0078425 17762 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.342 48.72 116170000 77695000 15529000 8736400 0 0 1329600 880490 0 590800 2118400 1552600 1469800 1240800 1477600 3549600 31118 2775 28392 261606;261607;261608;261609;261610;261611;261612;261613;261614;261615;261616;261617 207682;207683;207684;207685;207686 207683 4 LNANVMHGK Oxidation (M) 998.49675 0.4967491 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 10.459 7.3317 2 0.0043354 11498 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 112.37 60.352 65273000 45900000 12256000 7117400 0 0 0 0 0 0 0 0 0 0 0 0 31119 2775 28392 261618;261619;261620 207687;207688 207687 4408 2 LNAQTEISEQTAAGELDGGNDVSDLHSSEETNTK Unmodified 3559.6034 0.60340142 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 0 By MS/MS 3 0 1 1 72.839 68.891 3 0.026151 83395 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 17.127 15.179 6205400 0 6205400 0 0 0 0 0 0 0 0 0 0 0 0 0 31120 2804 28393 261621 207689 207689 1 LNATNIELATVQPGQNFHMFTK Oxidation (M) 2489.2373 0.23729352 1228 P28066 PSMA5 Proteasome subunit alpha type-5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 80.702 78.765 3 5.0524E-05 91812 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 43.644 40.224 110120000 49988000 0 0 0 0 0 0 0 0 24605000 0 22156000 0 13368000 0 31121 1228 28394 261622;261623;261624;261625 207690;207691;207692 207690 1818 3 LNATNIELATVQPGQNFHMFTK Unmodified 2473.2424 0.2423789 1228 P28066 PSMA5 Proteasome subunit alpha type-5 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 87.157 83.181 3 1.8091E-07 106564 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.676 69.214 43476000 26122000 0 0 0 0 0 0 0 0 0 0 0 0 0 17354000 31122 1228 28394 261626;261627 207693;207694 207694 2 LNAVVNDFWAEISESVDK Unmodified 2034.9898 0.98983583 4011 Q99460 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 0 0 By matching By MS/MS 2.6 0.49 2 3 1 4 99.441 95.51 2;3 1.7092E-58 118008 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 157.75 150.07 61272000 2130500 59142000 0 0 0 0 0 0 0 0 0 0 0 0 0 31123 4011 28395 261628;261629;261630;261631;261632 207695;207696 207695 2 LNCFLEQDLK Unmodified 1278.6278 0.62782285 1695 P52732 KIF11 Kinesin-like protein KIF11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 70.59 69.99 2 7.4709E-06 88506 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 142.56 91.503 143760000 0 65419000 0 3799100 4385500 8660000 4949700 5721400 4837100 0 8271200 9412900 7546100 8219500 12541000 31124 1695 28396 261633;261634;261635;261636;261637;261638;261639;261640;261641;261642;261643;261644;261645 207697;207698;207699;207700;207701;207702;207703;207704;207705;207706;207707 207699 9 LNCLDISGTGLK Unmodified 1289.6649 0.66493664 5219 Q9Y546 LRRC42 Leucine-rich repeat-containing protein 42 yes yes 0 0 0 By MS/MS 2 0 1 1 72.027 66.3 2 0.012625 84160 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.07 39.746 19415000 0 19415000 0 0 0 0 0 0 0 0 0 0 0 0 0 31125 5219 28397 261646 207708 207708 1 LNCQVIGASVDSHFCHLAWVNTPK Unmodified 2752.3214 0.32137427 2131 Q06830 PRDX1 Peroxiredoxin-1 yes yes 0 0 0 By MS/MS 3 0 1 1 85.653 82.431 4 0.00028348 98767 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 49.25 46.263 7799000 0 7799000 0 0 0 0 0 0 0 0 0 0 0 0 0 31126 2131 28398 261647 207709 207709 1 LNDAERELSEISER Unmodified 1659.8064 0.80639216 4215 Q9BWU0 SLC4A1AP Kanadaptin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.511 60.616 3 0.00098699 69019 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 44.925 33.007 95365000 0 0 0 3553600 3265700 5890900 4189400 6594200 4545400 7986200 10033000 11353000 9210000 8295400 20448000 31127 4215 28399 261648;261649;261650;261651;261652;261653;261654;261655;261656;261657;261658;261659 207710;207711;207712;207713;207714;207715;207716;207717;207718;207719;207720;207721;207722 207715 13 LNDAERELSEISERLK Unmodified 1900.9854 0.98541915 4215 Q9BWU0 SLC4A1AP Kanadaptin yes yes 0 0 2 By MS/MS 2 0 2 2 85.009 76.879 3;4 0.018069 100279 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.883 36.158 62456000 62456000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31128 4215 28400 261660;261661 207723;207724;207725 207725 2 LNDGNEYLFQAK Unmodified 1410.6779 0.67794416 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 60.685 61.007 2 0.0099559 68990 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.097 16.41 14368000 0 0 0 0 0 1853700 0 0 0 2238500 2111100 2409500 0 0 5754900 31129 2047 28401 261662;261663;261664;261665;261666 207726;207727 207727 2 LNDGSQITYEK Unmodified 1266.6092 0.6091959 697 O95831 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 34.902 30.146 2 1.8986E-05 39385 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.68 100.42 13078000 0 13078000 0 0 0 0 0 0 0 0 0 0 0 0 0 31130 697 28402 261667 207728;207729 207728 2 LNDLEDALQQAK Unmodified 1356.6885 0.68850885 780 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.23 2.35 1 10 2 121 5 6 2 23 9 11 7 9 11 8 9 8 11 8 7 73.048 72.847 2;3 1.1471E-66 78262 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 230.61 202.87 + 132060000000 326030000 9616300000 87661000 23515000000 6501700000 9179000000 5910800000 14267000000 5134800000 12238000000 9256100000 13643000000 11409000000 6048000000 4929500000 31131 780 28403 261668;261669;261670;261671;261672;261673;261674;261675;261676;261677;261678;261679;261680;261681;261682;261683;261684;261685;261686;261687;261688;261689;261690;261691;261692;261693;261694;261695;261696;261697;261698;261699;261700;261701;261702;261703;261704;261705;261706;261707;261708;261709;261710;261711;261712;261713;261714;261715;261716;261717;261718;261719;261720;261721;261722;261723;261724;261725;261726;261727;261728;261729;261730;261731;261732;261733;261734;261735;261736;261737;261738;261739;261740;261741;261742;261743;261744;261745;261746;261747;261748;261749;261750;261751;261752;261753;261754;261755;261756;261757;261758;261759;261760;261761;261762;261763;261764;261765;261766;261767;261768;261769;261770;261771;261772;261773;261774;261775;261776;261777;261778;261779;261780;261781;261782;261783;261784;261785;261786;261787;261788;261789;261790;261791;261792;261793;261794;261795;261796;261797;261798;261799;261800;261801 207730;207731;207732;207733;207734;207735;207736;207737;207738;207739;207740;207741;207742;207743;207744;207745;207746;207747;207748;207749;207750;207751;207752;207753;207754;207755;207756;207757;207758;207759;207760;207761;207762;207763;207764;207765;207766;207767;207768;207769;207770;207771;207772;207773;207774;207775;207776;207777;207778;207779;207780;207781;207782;207783;207784;207785;207786;207787;207788;207789;207790;207791;207792;207793;207794;207795;207796;207797;207798;207799;207800;207801;207802;207803;207804;207805;207806;207807;207808;207809;207810;207811;207812;207813;207814;207815;207816;207817;207818;207819;207820;207821;207822;207823;207824;207825;207826;207827;207828;207829;207830;207831;207832;207833;207834;207835;207836;207837;207838;207839;207840;207841;207842;207843;207844;207845;207846;207847;207848;207849;207850;207851;207852;207853;207854;207855;207856;207857;207858;207859;207860;207861;207862;207863;207864;207865;207866;207867;207868;207869;207870;207871 207862 124 LNDLEEALQQAK Unmodified 1370.7042 0.70415892 79 CON__P35908v2;P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.57 3.02 7 2 40 2 5 2 4 4 3 3 5 4 3 4 3 2 3 2 73.412 72.786 2;3 0 83118 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 273.44 219.69 + 42637000000 37504000 2396600000 30789000 4917800000 2176800000 4260000000 1848200000 5136100000 1896000000 4448400000 3151300000 4694400000 3887800000 2029900000 1725200000 31132 79 28404 261802;261803;261804;261805;261806;261807;261808;261809;261810;261811;261812;261813;261814;261815;261816;261817;261818;261819;261820;261821;261822;261823;261824;261825;261826;261827;261828;261829;261830;261831;261832;261833;261834;261835;261836;261837;261838;261839;261840;261841;261842;261843;261844;261845;261846;261847;261848;261849;261850 207872;207873;207874;207875;207876;207877;207878;207879;207880;207881;207882;207883;207884;207885;207886;207887;207888;207889;207890;207891;207892;207893;207894;207895;207896;207897;207898;207899;207900;207901;207902;207903;207904;207905;207906;207907;207908;207909;207910;207911;207912;207913;207914;207915;207916;207917;207918;207919;207920;207921;207922;207923;207924;207925;207926;207927;207928;207929;207930 207900 55 LNDLIQR Unmodified 870.49232 0.49231565 1721 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 2 37.353 37.668 2 0.02229 40310 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 105.2 62.134 260960000 0 0 0 13369000 0 23185000 0 0 11949000 28426000 27996000 45882000 25392000 18542000 66216000 31133 1721 28405 261851;261852;261853;261854;261855;261856;261857;261858;261859;261860 207931;207932;207933 207933 2 LNDMEPSK Unmodified 932.42733 0.42733213 4794 Q9P0L0 VAPA Vesicle-associated membrane protein-associated protein A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 16.412 16.309 2 0.0080045 16289 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 87.696 65.565 122430000 0 23168000 0 5028900 4103000 6595700 5426000 6016100 6965000 8676400 10032000 11964000 13629000 7739500 13091000 31134 4794 28406 261861;261862;261863;261864;261865;261866;261867;261868;261869;261870;261871;261872;261873 207934;207935;207936;207937;207938;207939;207940;207941;207942;207943 207938 9 LNDMEPSK Oxidation (M) 948.42225 0.42224675 4794 Q9P0L0 VAPA Vesicle-associated membrane protein-associated protein A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 8.0329 8.173 2 0.0078769 5964 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 75.738 50.288 77301000 0 0 0 5913500 4410800 0 5089300 7201800 6440400 8802500 15793000 0 8761700 6587000 8300900 31135 4794 28406 261874;261875;261876;261877;261878;261879;261880;261881;261882;261883 207944;207945;207946;207947 207946 6153 3 LNDNVFATPSPIIQQLEK Unmodified 2026.0735 0.073505879 3256 Q8IX90 SKA3 Spindle and kinetochore-associated protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 90.481 90.635 2 0.0029597 104966 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.524 41.757 7491500 0 0 0 0 0 0 0 0 0 2494000 1606700 0 0 0 3390800 31136 3256 28407 261884;261885;261886 207948;207949 207949 2 LNDPFQPFPGNDSPK Unmodified 1671.7893 0.78928553 1457 P42566 EPS15 Epidermal growth factor receptor substrate 15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 77.213 76.878 2 2.6168E-06 94653 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.56 110.12 133110000 0 85560000 0 0 2131000 4429600 3149900 2679700 0 5189700 4903600 6004100 3534800 5398000 10130000 31137 1457 28408 261887;261888;261889;261890;261891;261892;261893;261894;261895;261896;261897 207950;207951;207952;207953;207954 207952 5 LNDSDHQSSTSPLMEGTPTIK Oxidation (M) 2273.0482 0.048155344 3891 Q96JC1 VPS39 Vam6/Vps39-like protein yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 54.607 49.26 3 8.779E-07 63840 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.668 63.914 38202000 0 38202000 0 0 0 0 0 0 0 0 0 0 0 0 0 31138 3891 28409 261898;261899 207955;207956 207955 5392 2 LNDSDHQSSTSPLMEGTPTIK Unmodified 2257.0532 0.053240722 3891 Q96JC1 VPS39 Vam6/Vps39-like protein yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 64.781 59.449 3 0.0037265 76354 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 33.45 27.014 30139000 0 30139000 0 0 0 0 0 0 0 0 0 0 0 0 0 31139 3891 28409 261900;261901 207957;207958 207957 2 LNDSILQATEQR Unmodified 1386.7103 0.71030693 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.169 59.279 2 3.1796E-97 68143 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 240.1 203.4 440660000 0 0 0 70165000 27697000 22114000 33030000 106410000 14788000 25193000 29841000 44759000 31928000 19575000 15162000 31140 1029 28410 261902;261903;261904;261905;261906;261907;261908;261909;261910;261911;261912;261913 207959;207960;207961;207962;207963;207964;207965;207966;207967;207968;207969;207970;207971 207970 12 LNDSILQATEQRR Unmodified 1542.8114 0.81141795 1029 P15924 DSP Desmoplakin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 51.905 51.899 3 0.00047024 58728 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 63.185 38.995 187970000 0 0 0 33356000 11972000 23609000 12870000 58216000 9524900 12527000 0 0 16856000 9035000 0 31141 1029 28411 261914;261915;261916;261917;261918;261919;261920;261921;261922;261923;261924 207972;207973;207974;207975;207976;207977;207978;207979;207980;207981;207982 207977 10 LNDYIFSFDK Unmodified 1260.6027 0.60265396 1733 P54136 RARS Arginine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.366 82.427 2 0.0022396 95572 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 85.377 65.591 218810000 0 0 0 5049900 5853200 21191000 8477100 11955000 12084000 21918000 16489000 21168000 13538000 21832000 59253000 31142 1733 28412 261925;261926;261927;261928;261929;261930;261931;261932;261933;261934;261935;261936 207983;207984;207985;207986;207987 207984 5 LNDYLQIETIQALEELAAK Unmodified 2174.1471 0.14706475 4282 Q9C0B1 FTO Alpha-ketoglutarate-dependent dioxygenase FTO yes yes 0 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 1 3 101.62 96.356 3 5.5407E-65 120502 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.52 108.94 50613000 8657000 41956000 0 0 0 0 0 0 0 0 0 0 0 0 0 31143 4282 28413 261937;261938;261939;261940 207988;207989;207990;207991;207992 207991 5 LNEAAAGLNQAATELVQASR Unmodified 2026.0443 0.044331016 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 2 1 1 1 1 1 2 2 2 2 2 83.774 83.869 2;3 6.4726E-62 97167 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 136.61 127.57 334480000 0 0 0 0 17668000 11408000 15565000 4770000 4851700 19452000 45956000 57608000 22086000 27394000 107720000 31144 5187 28414 261941;261942;261943;261944;261945;261946;261947;261948;261949;261950;261951;261952;261953;261954;261955;261956;261957 207993;207994;207995;207996;207997;207998;207999;208000;208001;208002;208003;208004;208005;208006 207998 13 LNEANLNVELMK Oxidation (M) 1402.7126 0.71261511 3907 Q96KG9 SCYL1 N-terminal kinase-like protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.64 2.9 1 1 9 2 1 1 1 1 1 1 1 1 1 62.016 61.191 2 6.6439E-06 69846 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 108.7 87.958 143470000 0 67797000 0 0 6742900 10223000 7270300 0 7623500 0 8843500 10547000 6877000 8322000 9220000 31145 3907 28415 261958;261959;261960;261961;261962;261963;261964;261965;261966;261967;261968 208007;208008;208009;208010;208011;208012;208013;208014;208015;208016;208017;208018 208017 5407 12 LNEANLNVELMK Unmodified 1386.7177 0.71770049 3907 Q96KG9 SCYL1 N-terminal kinase-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 73.845 73.243 2 1.0214E-14 91403 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145.41 113.77 237060000 0 204140000 0 0 3855300 0 0 0 0 5748900 6517300 0 3019700 5772100 8007000 31146 3907 28415 261969;261970;261971;261972;261973;261974;261975;261976;261977;261978 208019;208020;208021;208022;208023;208024;208025;208026;208027 208021 9 LNEAQPSTIATSMR Oxidation (M) 1533.7457 0.74570615 1785 P56537 EIF6 Eukaryotic translation initiation factor 6 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.148 37.328 2 3.7078E-15 40922 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 117.86 85.445 108030000 0 0 0 6215700 4071200 5127800 4102100 5682500 2815300 8992600 13279000 19916000 13624000 8547000 15656000 31147 1785 28416 261979;261980;261981;261982;261983;261984;261985;261986;261987;261988;261989;261990 208028;208029;208030;208031;208032;208033;208034 208032 2910 6 LNEAQPSTIATSMR Unmodified 1517.7508 0.75079153 1785 P56537 EIF6 Eukaryotic translation initiation factor 6 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 51.65 52.092 2 2.7402E-16 57832 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 151.13 99.178 126270000 0 0 0 0 0 0 0 0 0 20578000 0 24695000 0 22523000 58476000 31148 1785 28416 261991;261992;261993;261994 208035;208036;208037 208036 3 LNEAQPSTIATSMRDSLIDSLT Unmodified 2362.1686 0.16860483 1785 P56537 EIF6 Eukaryotic translation initiation factor 6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 96.206 90.312 2;3 2.0963E-11 114344 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 124.62 113.17 211570000 137390000 68723000 5461300 0 0 0 0 0 0 0 0 0 0 0 0 31149 1785 28417 261995;261996;261997;261998 208038;208039;208040 208040 3 LNEAQPSTIATSMRDSLIDSLT Oxidation (M) 2378.1635 0.16351945 1785 P56537 EIF6 Eukaryotic translation initiation factor 6 yes yes 0 1 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 84.876 81.392 2 1.8051E-08 101071 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.734 81.104 53669000 0 49659000 4009900 0 0 0 0 0 0 0 0 0 0 0 0 31150 1785 28417 261999;262000;262001 208041;208042 208041 2910 1 LNECLQEVYEPDWPGRDEANK Unmodified 2561.1493 0.14926637 162 O00499 BIN1 Myc box-dependent-interacting protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 79.399 74.242 3 5.6015E-84 94941 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 149.94 142.4 81309000 14551000 59116000 7641600 0 0 0 0 0 0 0 0 0 0 0 0 31151 162 28418 262002;262003;262004 208043;208044;208045;208046 208044 4 LNECPLDPGGYFIVK Unmodified 1720.8494 0.84944294 4689 Q9NW08 POLR3B DNA-directed RNA polymerase III subunit RPC2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 6 4 2 2 1 1 1 1 87.418 85.653 2 0.043575 103544 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 45.973 31.553 73588000 0 63418000 1598600 0 0 0 0 0 0 2959300 0 0 0 0 5612400 31152 4689 28419 262005;262006;262007;262008 208047;208048 208048 2 LNECVDHTPK Unmodified 1211.5605 0.56047157 1984 P78417 GSTO1 Glutathione S-transferase omega-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.87 3.88 6 2 7 2 4 2 1 1 1 1 1 2 18.233 16.371 2;3 9.9753E-11 22148 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 172.59 152.81 2038700000 94586000 1759900000 72922000 2735500 0 0 2394900 0 2453800 0 26321000 0 0 7652200 69787000 31153 1984 28420 262009;262010;262011;262012;262013;262014;262015;262016;262017;262018;262019;262020;262021;262022;262023 208049;208050;208051;208052;208053;208054;208055;208056;208057;208058;208059;208060;208061;208062 208052 10 LNEDIFIVDQHATDEK Unmodified 1885.9058 0.90577185 1739 P54278 PMS2 Mismatch repair endonuclease PMS2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72.946 72.178 3 0.00024849 82383 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.962 46.993 161620000 14830000 10630000 0 5357400 7166200 15177000 7735600 15637000 7534900 12798000 10363000 14553000 9056500 10228000 20551000 31154 1739 28421 262024;262025;262026;262027;262028;262029;262030;262031;262032;262033;262034;262035;262036;262037 208063;208064;208065;208066;208067;208068;208069;208070;208071;208072;208073;208074;208075;208076;208077 208065 14 LNEDMACSVAGITSDANVLTNELR Oxidation (M) 2608.2109 0.21088035 1196 P25789 PSMA4 Proteasome subunit alpha type-4 yes yes 0 1 0 By MS/MS 10 0 1 1 87.005 87.163 3 4.9968E-07 100779 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.25 47.084 6699000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6699000 31155 1196 28422 262038 208078 208078 1731 1 LNEEIERLK Unmodified 1142.6295 0.62953741 5247 Q9Y5S2 CDC42BPB Serine/threonine-protein kinase MRCK beta yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 43.718 39.135 3 0.0026807 48696 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 107.57 61.112 69348000 0 41994000 27355000 0 0 0 0 0 0 0 0 0 0 0 0 31156 5247 28423 262039;262040;262041 208079;208080;208081;208082;208083 208082 5 LNEGFISQNDRR Unmodified 1447.7168 0.71678929 2416 Q14573 ITPR3 Inositol 1,4,5-trisphosphate receptor type 3 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By matching 10 0 5 1 1 1 1 1 38.456 38.308 3 0.018187 43187 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 31.431 15.177 10960000 0 0 0 2897600 1430500 2452300 1901700 0 2277700 0 0 0 0 0 0 31157 2416 28424 262042;262043;262044;262045;262046 208084;208085;208086 208085 3 LNEGHTLDMDLVFLFDNSK Unmodified 2207.0569 0.056869537 227 O14920 IKBKB Inhibitor of nuclear factor kappa-B kinase subunit beta yes yes 0 0 0 By MS/MS 2 0 1 1 98.854 90.724 3 0.014488 116968 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 35.834 26.428 10683000 10683000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31158 227 28425 262047 208087 208087 0 LNEGVVEFASYGDLK Unmodified 1639.8094 0.80935227 2259 Q13243 SRSF5 Serine/arginine-rich splicing factor 5 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 83.737 80.252 2 0.0032309 99580 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.815 62.143 144070000 0 136940000 7126000 0 0 0 0 0 0 0 0 0 0 0 0 31159 2259 28426 262048;262049;262050 208088;208089;208090 208088 3 LNEHFLNTTDFLDTIK Unmodified 1919.9629 0.9628928 1553 P48735 IDH2 Isocitrate dehydrogenase [NADP], mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 94.04 89.144 3 0.00038881 110726 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.943 55.285 15481000 0 15481000 0 0 0 0 0 0 0 0 0 0 0 0 0 31160 1553 28427 262051 208091 208091 1 LNEHFSK Unmodified 873.43447 0.43446642 4822 Q9P2N5 RBM27 RNA-binding protein 27 yes yes 0 0 0 By MS/MS 10 0 1 1 13.954 14.172 2 0.047942 13654 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 65.235 42.613 5548000 0 0 0 0 0 0 0 0 0 0 0 0 5548000 0 0 31161 4822 28428 262052 208092 208092 1 LNEHFSR Unmodified 901.44061 0.44061443 2786 Q5T8P6 RBM26 RNA-binding protein 26 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 16.894 17.049 2 0.037306 16836 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 69.998 45 138150000 0 0 0 7399000 8822000 11447000 0 0 0 0 33436000 0 36240000 0 40810000 31162 2786 28429 262053;262054;262055;262056;262057;262058 208093 208093 1 LNEILQAR Unmodified 955.54508 0.5450795 4033 Q99613;B5ME19 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 43.404 43.425 2 0.0089203 48560 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 84.568 48.949 197090000 0 0 0 20015000 18735000 31010000 30908000 0 25367000 7686400 56704000 0 6668600 0 0 31163 4033 28430 262059;262060;262061;262062;262063;262064;262065;262066 208094;208095;208096;208097 208095 1 LNEILQARGK Unmodified 1140.6615 0.66150624 4033 Q99613;B5ME19 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 0 0 1 By MS/MS By matching 2 0 3 2 1 40.026 33.916 2;3 0.0036067 47065 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.647 27.216 103500000 96736000 6760600 0 0 0 0 0 0 0 0 0 0 0 0 0 31164 4033 28431 262067;262068;262069 208098;208099 208098 0 LNEINEK Unmodified 858.4447 0.44469675 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 14.883 12.06 2 0.017113 16063 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.16 19.558 507960000 0 507260000 704460 0 0 0 0 0 0 0 0 0 0 0 0 31165 1300 28432 262070;262071 208100;208101 208100 2 LNEIVDQIK Unmodified 1070.5972 0.59717465 4391 Q9H446 RWDD1 RWD domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54.889 54 2 0.0089039 69052 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.819 27.237 765080000 13458000 613080000 0 8323100 7243100 10317000 8644900 9049500 5403900 13653000 12380000 11616000 9607100 15465000 26845000 31166 4391 28433 262072;262073;262074;262075;262076;262077;262078;262079;262080;262081;262082;262083;262084;262085 208102;208103;208104;208105;208106;208107 208103 6 LNEIVGNEDTVSR Unmodified 1444.7158 0.71578623 1348 P35250 RFC2 Replication factor C subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.827 44.001 2 2.4422E-25 48266 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 191.53 151.9 486310000 0 0 0 28612000 27105000 46795000 28226000 44316000 30357000 37007000 51816000 36192000 65077000 32419000 58392000 31167 1348 28434 262086;262087;262088;262089;262090;262091;262092;262093;262094;262095;262096;262097 208108;208109;208110;208111;208112;208113;208114;208115;208116;208117;208118;208119;208120;208121;208122;208123;208124;208125;208126 208113 19 LNELDDSLEK Unmodified 1174.5717 0.57174776 4673 Q9NVN3 RIC8B Synembryn-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 45.004 45.503 2 0.003478 50620 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.345 32.576 16918000 0 0 0 0 0 4469500 0 0 0 0 3016100 3538200 0 0 5894500 31168 4673 28435 262098;262099;262100;262101 208127;208128 208128 1 LNELEAQTR Unmodified 1072.5513 0.55128709 1436 P41229;Q9BY66;Q9UGL1 KDM5C;KDM5D;KDM5B Lysine-specific demethylase 5C;Lysine-specific demethylase 5D;Lysine-specific demethylase 5B yes no 0 0 0 By matching By matching By matching By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 27.181 27.405 2 0.018109 29247 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 55.112 17.384 19282000 0 0 0 0 0 4404100 3577600 2535500 0 0 3614600 0 3019600 2130800 0 31169 1436 28436 262102;262103;262104;262105;262106;262107 208129 208129 1 LNELESDLTFK Unmodified 1307.6609 0.66089712 2940 Q6P996 PDXDC1 Pyridoxal-dependent decarboxylase domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.53 2.94 1 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74.981 74.367 2 5.9494E-16 84856 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 163.94 129.85 536950000 365250 17034000 19268000 22002000 27622000 33349000 30529000 43294000 35852000 55320000 52391000 52608000 46762000 37727000 62828000 31170 2940 28437 262108;262109;262110;262111;262112;262113;262114;262115;262116;262117;262118;262119;262120;262121;262122 208130;208131;208132;208133;208134;208135;208136;208137;208138;208139;208140;208141;208142;208143;208144;208145;208146;208147 208141 14 LNELGQR Unmodified 828.44537 0.44536545 3250 Q8IWZ3 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 17.611 17.892 2 0.023433 18043 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 85.357 26.67 77839000 0 0 0 0 0 0 8409900 6950500 6239500 0 0 15493000 13180000 8833000 18733000 31171 3250 28438 262123;262124;262125;262126;262127;262128;262129 208148 208148 1 LNELGQRISAIEK Unmodified 1469.8202 0.82019173 3250 Q8IWZ3 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 68.337 60.042 3 0.0008297 80427 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.496 38.496 10604000 10604000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31172 3250 28439 262130 208149;208150 208149 2 LNELLEAIK Unmodified 1041.607 0.60701105 4994 Q9ULH1 ASAP1 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 79.666 75.999 2 0.00050037 94682 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.23 73.624 24341000 0 22810000 1531300 0 0 0 0 0 0 0 0 0 0 0 0 31173 4994 28440 262131;262132 208151 208151 1 LNELLVK Unmodified 827.51165 0.5116541 2210 Q12931 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.209 48.371 2 0.023413 54482 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 86.472 39.809 409920000 0 0 0 28779000 20649000 34629000 34141000 32370000 23169000 39923000 40441000 28334000 47203000 30789000 49488000 31174 2210 28441 262133;262134;262135;262136;262137;262138;262139;262140;262141;262142;262143;262144 208152;208153;208154;208155;208156;208157;208158;208159 208154 7 LNELPSTLQR Unmodified 1169.6404 0.64043645 5293 Q9Y6R0 NUMBL Numb-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 52.393 52.492 2 0.0015746 59576 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 90.15 56.888 113840000 0 0 0 7272500 6608900 0 11265000 7988500 9714700 14522000 14797000 15980000 13802000 11891000 0 31175 5293 28442 262145;262146;262147;262148;262149;262150;262151;262152;262153;262154 208160;208161;208162;208163;208164;208165;208166;208167;208168;208169 208161 10 LNEMSYELK Oxidation (M) 1141.5325 0.53252548 2817 Q5VU43 PDE4DIP Myomegalin yes yes 0 1 0 By MS/MS 2 0 1 1 43.127 37.979 2 0.033595 49374 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 61.602 43.566 9718300 0 9718300 0 0 0 0 0 0 0 0 0 0 0 0 0 31176 2817 28443 262155 208170 208170 1 LNENAISR Unmodified 915.47739 0.47739386 646 O95361 TRIM16 Tripartite motif-containing protein 16 yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 2 21.217 21.408 2 0.035464 21137 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.482 24.308 132990000 0 0 0 9235900 5704700 16110000 9287100 8043700 7635100 10919000 16197000 0 0 11684000 38170000 31177 646 28444 262156;262157;262158;262159;262160;262161;262162;262163;262164;262165;262166 208171 208171 1 LNENAISRLQANQK Unmodified 1597.8536 0.85361712 646 O95361 TRIM16 Tripartite motif-containing protein 16 yes yes 0 0 1 By MS/MS 2 0 1 1 51.804 43.842 3 0.017369 60396 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.333 33.9 21441000 21441000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31178 646 28445 262167 208172 208172 1 LNENHSGELWK Unmodified 1325.6364 0.6364137 2284 Q13418 ILK Integrin-linked protein kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 1 2 2 2 1 2 1 2 1 1 2 34.958 35.181 2;3 0.00039896 38856 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 79.036 57.806 359660000 0 0 0 20316000 15293000 48675000 24740000 21125000 14997000 35676000 6080400 47662000 33509000 33834000 57751000 31179 2284 28446 262168;262169;262170;262171;262172;262173;262174;262175;262176;262177;262178;262179;262180;262181;262182;262183;262184;262185 208173;208174;208175;208176;208177;208178;208179;208180 208173 8 LNEQASEEILK Unmodified 1272.6561 0.65614609 2049 Q01105 SET Protein SET yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.577 48.737 2 1.0396E-05 54715 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 138.66 100.57 578490000 0 0 0 26106000 20442000 31090000 26859000 19082000 21008000 20800000 60884000 62915000 34776000 92434000 162100000 31180 2049 28447 262186;262187;262188;262189;262190;262191;262192;262193;262194;262195;262196;262197 208181;208182;208183;208184;208185;208186;208187;208188;208189;208190;208191;208192;208193;208194;208195;208196 208189 16 LNEQHQLILSK Unmodified 1321.7354 0.73539946 3280 Q8IYB5 SMAP1 Stromal membrane-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.32 3.22 5 1 22 2 2 2 2 2 2 2 1 2 2 1 2 2 2 2 40.963 39.902 2;3 1.119E-09 54880 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.48 87.298 932510000 190230000 72110000 145970000 18311000 14189000 36437000 39448000 25546000 31426000 65836000 48153000 39338000 43119000 60776000 101630000 31181 3280 28448 262198;262199;262200;262201;262202;262203;262204;262205;262206;262207;262208;262209;262210;262211;262212;262213;262214;262215;262216;262217;262218;262219;262220;262221;262222;262223;262224;262225 208197;208198;208199;208200;208201;208202;208203;208204;208205;208206;208207;208208;208209;208210;208211;208212 208200 9 LNEQQSVLQR Unmodified 1213.6415 0.64149908 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 33.523 32.938 2 7.8489E-32 36419 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 214.23 155.31 485160000 0 29161000 0 21238000 22211000 41328000 34285000 48242000 34125000 40067000 65390000 45545000 0 41977000 61594000 31182 2431 28449 262226;262227;262228;262229;262230;262231;262232;262233;262234;262235;262236;262237;262238 208213;208214;208215;208216;208217;208218;208219;208220;208221;208222;208223;208224;208225 208213 13 LNEQSPTR Unmodified 943.47231 0.47230849 492 O75396 SEC22B Vesicle-trafficking protein SEC22b yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 2 1 1 1 1 1 9.2455 9.4058 2 0.0047287 7675 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 113.5 57.995 28206000 0 0 0 0 2062200 0 0 1892700 1452800 0 0 12348000 0 0 10451000 31183 492 28450 262239;262240;262241;262242;262243;262244;262245;262246;262247 208226;208227;208228;208229;208230;208231 208227 6 LNESLDENFK Unmodified 1207.5721 0.57208211 4906 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 6 4 2 2 1 1 1 1 52.105 48.815 2 0.0023028 62449 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.42 54.636 126980000 27872000 76761000 0 0 0 0 10034000 0 0 0 0 0 0 0 12309000 31184 4906 28451 262248;262249;262250;262251 208232;208233;208234 208232 3 LNESTFDTQITK Unmodified 1395.6882 0.6881745 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 4 2 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 55.276 53.486 2 5.9583E-13 67857 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 156.64 121.34 4445200000 54639000 3301600000 14251000 42038000 50396000 79698000 51773000 65852000 54798000 102120000 103640000 115420000 111630000 102630000 194640000 31185 1986 28452 262252;262253;262254;262255;262256;262257;262258;262259;262260;262261;262262;262263;262264;262265;262266;262267;262268;262269 208235;208236;208237;208238;208239;208240;208241;208242;208243;208244;208245;208246;208247;208248;208249;208250;208251;208252 208239 17 LNESVMVFTK Unmodified 1166.6005 0.60054547 4622 Q9NS91 RAD18 E3 ubiquitin-protein ligase RAD18 yes yes 0 0 0 By MS/MS 2 0 1 1 74.407 69.252 2 0.032037 86910 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.334 42.411 12459000 0 12459000 0 0 0 0 0 0 0 0 0 0 0 0 0 31186 4622 28453 262270 208253 208253 1 LNETISTLQQAILK Unmodified 1570.893 0.89302232 2778 Q5T5Y3 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 85.141 85.309 2 0.00010063 98559 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.397 75.51 2910000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2910000 31187 2778 28454 262271 208254 208254 1 LNETLSSFSDDNK Unmodified 1468.6682 0.66816734 3903 Q96K76 USP47 Ubiquitin carboxyl-terminal hydrolase 47 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 52.135 52.238 2 1.3377E-13 57983 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 141.71 123.4 47998000 0 0 0 4373400 2615700 8348100 0 3932200 0 5018500 0 7068700 0 5593400 11048000 31188 3903 28455 262272;262273;262274;262275;262276;262277;262278;262279;262280 208255;208256;208257;208258;208259;208260;208261;208262 208257 8 LNETTDPDKK Unmodified 1159.5721 0.57208211 1579 P49589 CARS Cysteine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 5.33 3.3 2 1 1 1 1 8.9407 5.3712 3 0.0078099 7283 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 53.569 33.365 122380000 327330 122060000 0 0 0 0 0 0 0 0 0 0 0 0 0 31189 1579 28456 262281;262282;262283 208263;208264 208263 2 LNEVSSDANR Unmodified 1103.5207 0.52071524 4428 Q9H6Z4 RANBP3 Ran-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 12.997 13.076 2 0.045648 12359 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 61.161 39.075 28464000 0 0 0 3282400 2645500 0 5176700 3215300 0 0 0 6509100 0 7635400 0 31190 4428 28457 262284;262285;262286;262287;262288;262289 208265 208265 0 LNEVSSDANRENAAAESGSESSSQEATPEK Unmodified 3093.3607 0.36065195 4428 Q9H6Z4 RANBP3 Ran-binding protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 32.128 30.932 3 3.5529E-290 38714 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 238.59 236.83 78226000 6353100 34409000 0 0 0 4577000 5079800 2828800 0 4729500 7693600 0 0 0 12555000 31191 4428 28458 262290;262291;262292;262293;262294;262295;262296;262297 208266;208267;208268;208269;208270;208271;208272 208269 7 LNEYRLDEAPK Unmodified 1346.683 0.68302954 644 O95352 ATG7 Ubiquitin-like modifier-activating enzyme ATG7 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 45.503 40.376 2;3 0.0066679 52919 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.867 53.564 36241000 0 36241000 0 0 0 0 0 0 0 0 0 0 0 0 0 31192 644 28459 262298;262299 208273;208274 208273 2 LNFANPPFK Unmodified 1046.5549 0.5549159 1491 P45985 MAP2K4 Dual specificity mitogen-activated protein kinase kinase 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72.734 71.734 2 0.0031138 82224 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 92.187 55.212 318330000 62940000 52642000 6136000 9701900 9093900 18012000 16364000 11536000 12791000 19011000 20907000 18768000 16008000 17761000 26657000 31193 1491 28460 262300;262301;262302;262303;262304;262305;262306;262307;262308;262309;262310;262311;262312;262313;262314 208275;208276;208277;208278;208279;208280;208281;208282;208283;208284;208285;208286;208287;208288;208289 208287 15 LNFAVASR Unmodified 876.48175 0.48175096 1270 P30101 PDIA3 Protein disulfide-isomerase A3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 49.254 49.509 2 0.005566 54694 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 106.36 47.669 397090000 0 0 0 0 22958000 12497000 0 24714000 0 20559000 56453000 66161000 28809000 45271000 119670000 31194 1270 28461 262315;262316;262317;262318;262319;262320;262321;262322;262323 208290;208291;208292;208293;208294 208290 5 LNFAVASRK Unmodified 1004.5767 0.57671398 1270 P30101 PDIA3 Protein disulfide-isomerase A3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 37.254 37.349 2 0.019301 39807 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 99.305 52.503 120380000 0 0 0 6761900 4707000 5893000 9778500 7428400 5957900 6660700 0 0 9038300 14942000 49213000 31195 1270 28462 262324;262325;262326;262327;262328;262329;262330;262331;262332;262333 208295 208295 0 LNFDMTASPK Unmodified 1122.5379 0.53794521 5005 Q9ULU4 ZMYND8 Protein kinase C-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 59.949 59.578 2 0.004818 67080 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 71.451 51.664 102020000 0 47631000 0 0 3687200 3317100 4539500 4255800 0 3870200 6662600 7987800 6646300 4629000 8791600 31196 5005 28463 262334;262335;262336;262337;262338;262339;262340;262341;262342;262343;262344;262345 208296;208297;208298;208299;208300;208301;208302;208303;208304;208305;208306 208303 10 LNFEAAWDEVGDEFEK Unmodified 1897.837 0.83702358 5267 Q9Y678 COPG1 Coatomer subunit gamma-1 yes yes 0 0 0 By MS/MS By MS/MS 2.67 0.471 1 2 1 2 96.002 92.149 2 5.461E-42 114268 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 150.56 134.64 109430000 4155900 105280000 0 0 0 0 0 0 0 0 0 0 0 0 0 31197 5267 28464 262346;262347;262348 208307;208308;208309;208310;208311 208308 5 LNFELTDALK Unmodified 1162.6234 0.6233894 1169 P23786 CPT2 Carnitine O-palmitoyltransferase 2, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 87.529 82.721 2 0.0061886 102816 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.623 60.195 15245000 0 15245000 0 0 0 0 0 0 0 0 0 0 0 0 0 31198 1169 28465 262349 208312 208312 1 LNFGDDIPSALR Unmodified 1316.6725 0.67246486 5029 Q9UNE7 STUB1 E3 ubiquitin-protein ligase CHIP yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 81.008 81.111 2 0.002522 93871 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 74.944 59.329 131760000 0 0 0 0 5600200 11849000 3235800 6323400 5989000 9034900 13890000 16894000 5497300 12819000 40628000 31199 5029 28466 262350;262351;262352;262353;262354;262355;262356;262357;262358;262359;262360 208313;208314;208315;208316;208317;208318;208319;208320;208321;208322;208323;208324;208325;208326 208319 14 LNFIQVSK Unmodified 947.54402 0.54401687 4662 Q9NV88 INTS9 Integrator complex subunit 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 61.603 61.654 2 0.011267 70469 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 77.318 32.596 41215000 0 0 0 3353100 3867100 0 4064400 4117600 0 0 5662500 0 5257000 4861000 10032000 31200 4662 28467 262361;262362;262363;262364;262365;262366;262367;262368 208327;208328;208329;208330;208331;208332 208329 6 LNFIVTGLQDIDK Unmodified 1474.8031 0.80314468 4150 Q9BTT4 MED10 Mediator of RNA polymerase II transcription subunit 10 yes yes 0 0 0 By MS/MS 2 0 1 1 94.914 90.05 2 0.0030047 111712 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.962 54.658 10395000 0 10395000 0 0 0 0 0 0 0 0 0 0 0 0 0 31201 4150 28468 262369 208333 208333 1 LNFPSVQK Unmodified 931.51272 0.51271674 36 A8K2U0 A2ML1 Alpha-2-macroglobulin-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 54.361 54.507 2 0.012605 62754 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 74.255 31.132 58968000 0 0 0 35760000 0 0 0 8401100 3808500 0 6248100 4750400 0 0 0 31202 36 28469 262370;262371;262372;262373;262374 208334;208335;208336 208336 3 LNFSHGTHEYHAETIK Unmodified 1882.8962 0.89621022 1000 P14618 PKM Pyruvate kinase PKM yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.21 2.27 1 2 25 2 1 1 2 3 3 3 2 2 2 2 3 2 37.632 37.497 3;4 5.8889E-89 38930 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 205.68 205.68 3532900000 963480 8026600 0 10752000 0 340810000 61648000 151460000 282480000 112310000 209510000 824620000 166770000 184830000 1178800000 31203 1000 28470 262375;262376;262377;262378;262379;262380;262381;262382;262383;262384;262385;262386;262387;262388;262389;262390;262391;262392;262393;262394;262395;262396;262397;262398;262399;262400;262401;262402 208337;208338;208339;208340;208341;208342;208343;208344;208345;208346;208347;208348;208349;208350;208351;208352;208353;208354;208355;208356;208357;208358;208359;208360;208361;208362;208363 208346 21 LNFSTPTSTNIVSVCR Unmodified 1794.8934 0.89343302 248 O15067 PFAS Phosphoribosylformylglycinamidine synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 77.137 77.235 2 1.9193E-28 88724 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 155.02 100.54 72882000 0 0 0 0 1434400 0 0 0 0 5249500 9871300 13936000 4554700 10179000 27657000 31204 248 28471 262403;262404;262405;262406;262407;262408;262409 208364;208365;208366;208367;208368;208369 208365 6 LNFVQLMFEMSR 2 Oxidation (M) 1545.732 0.73197035 5354 yes yes 0 2 0 By MS/MS 10 0 1 1 67.23 67.191 2 0.020383 77283 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 40.002 25.582 + 6076100 0 0 0 0 0 6076100 0 0 0 0 0 0 0 0 0 31205 5354 28472 262410 208370 208370 6739 0 LNFVQLMFEMSR Oxidation (M) 1529.7371 0.73705572 5354 yes yes 0 1 0 By MS/MS 2.25 0.433 3 1 4 72.054 67.189 2 0.016056 74471 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 56.258 17.508 + 339570000 0 339570000 0 0 0 0 0 0 0 0 0 0 0 0 0 31206 5354 28472 262411;262412;262413;262414 208371;208372 208371 6739 2 LNGFQLENFTLK Unmodified 1422.7507 0.75071518 153 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 87.441 85.511 2 0.017366 108590 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.03 56.912 18523000 10423000 0 0 0 0 1803500 0 1393100 0 0 0 0 0 0 4902700 31207 153 28473 262415;262416;262417;262418 208373;208374;208375 208375 3 LNGGLGTSMGCK Unmodified 1193.5533 0.5532777 2638 Q16851 UGP2 UTP--glucose-1-phosphate uridylyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.33 3.77 3 6 1 1 1 1 1 1 1 1 1 36.743 35.278 2 3.0986E-14 45306 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.17 127.13 328260000 115020000 170240000 1721700 0 0 3669300 0 0 0 3501100 5212600 0 3374000 7220300 18303000 31208 2638 28474 262419;262420;262421;262422;262423;262424;262425;262426;262427 208376;208377;208378;208379;208380;208381;208382;208383 208378 8 LNGGLGTSMGCK Oxidation (M) 1209.5482 0.54819232 2638 Q16851 UGP2 UTP--glucose-1-phosphate uridylyltransferase yes yes 0 1 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 23.096 19.134 2 0.017396 24059 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 55.084 38.94 2849800 0 2849800 0 0 0 0 0 0 0 0 0 0 0 0 0 31209 2638 28474 262428;262429 208384;208385 208384 4291 2 LNGHQLENHALK Unmodified 1372.7211 0.72114638 4768 Q9NZI8 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 34.078 27.846 3 0.034698 39081 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 33.968 11.247 15585000 15585000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31210 4768 28475 262430 208386 208386 1 LNGLADLEACIK Unmodified 1315.6806 0.6805867 2685 Q4J6C6 PREPL Prolyl endopeptidase-like yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 84.008 80.405 2 0.0086098 100043 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.841 39.3 46848000 0 45974000 873650 0 0 0 0 0 0 0 0 0 0 0 0 31211 2685 28476 262431;262432;262433 208387;208388 208387 2 LNGLENRVEVGK Unmodified 1326.7256 0.72556306 487 O75369 FLNB Filamin-B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.06 3.8 5 1 10 2 2 2 1 1 1 1 1 1 1 1 1 1 42.569 40.554 2;3 0.00017223 51371 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 105.98 73.224 415470000 118450000 41443000 124740000 9353700 4726800 13010000 8459300 8107700 8511100 13837000 0 13188000 0 15109000 36537000 31212 487 28477 262434;262435;262436;262437;262438;262439;262440;262441;262442;262443;262444;262445;262446;262447;262448;262449 208389;208390;208391;208392;208393;208394;208395;208396;208397;208398;208399;208400 208397 10 LNGNLRPHGDNR Unmodified 1361.6912 0.69124324 3594 Q8WXI9 GATAD2B Transcriptional repressor p66-beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 11.46 11.547 3 0.004273 10662 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 48.568 25.192 76875000 0 0 0 7299100 5035800 10252000 7200700 5474700 7811900 9749300 7091900 0 16959000 0 0 31213 3594 28478 262450;262451;262452;262453;262454;262455;262456;262457;262458 208401;208402;208403;208404;208405;208406;208407 208402 4 LNGTDPEDVIR Unmodified 1227.6095 0.60953025 229 P19105;O14950;P24844 MYL12A;MYL12B;MYL9 Myosin regulatory light chain 12A;Myosin regulatory light chain 12B;Myosin regulatory light polypeptide 9 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.077 51.228 2 3.7733E-05 57968 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 137.95 93.604 5427800000 0 0 0 358120000 433810000 410480000 369550000 343910000 312380000 501800000 543560000 733880000 429140000 320050000 671140000 31214 229 28479 262459;262460;262461;262462;262463;262464;262465;262466;262467;262468;262469;262470 208408;208409;208410;208411;208412;208413;208414;208415;208416;208417;208418;208419 208408 7 LNGTLREDDNR Unmodified 1301.6324 0.63239096 2554 Q15637 SF1 Splicing factor 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.649 14.814 3 0.00022076 13536 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.69 60.098 486900000 0 0 0 26318000 18442000 17525000 27431000 21093000 24532000 37562000 59026000 54711000 31755000 54956000 113550000 31215 2554 28480 262471;262472;262473;262474;262475;262476;262477;262478;262479;262480;262481;262482 208420;208421;208422;208423;208424;208425;208426;208427;208428;208429;208430;208431 208423 10 LNHFFEGVEAR Unmodified 1317.6466 0.64658446 4661 Q9NV70 EXOC1 Exocyst complex component 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 55.278 55.575 3 0.0024046 63088 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 50.149 24.257 43644000 0 0 0 0 0 7942100 0 0 4676800 3777600 0 7512700 4670000 5096200 9969000 31216 4661 28481 262483;262484;262485;262486;262487;262488;262489 208432;208433;208434 208432 3 LNHLCGADFVK Unmodified 1272.6285 0.62849155 653 O95394 PGM3 Phosphoacetylglucosamine mutase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 57.078 50.531 2;3 0.00013614 65566 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.49 90.238 613990000 469590000 80569000 63825000 0 0 0 0 0 0 0 0 0 0 0 0 31217 653 28482 262490;262491;262492;262493 208435;208436;208437;208438;208439 208435 5 LNHNDWIK Unmodified 1038.5247 0.52467841 1122 P21283 ATP6V1C1 V-type proton ATPase subunit C 1 yes yes 0 0 0 By MS/MS 2 0 1 1 41.276 34.595 2 0.010873 47763 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 111.17 78.697 80408000 80408000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31218 1122 28483 262494 208440 208440 1 LNHPPEQIDSHSR Unmodified 1528.7383 0.73825301 3521 Q8TEW0 PARD3 Partitioning defective 3 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 19.374 19.599 3 0.009845 20168 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 28.986 15.785 44435000 0 0 0 3266600 2650500 5188000 0 3413700 0 5016900 4860100 5327600 5904900 3474900 5331500 31219 3521 28484 262495;262496;262497;262498;262499;262500;262501;262502;262503;262504 208441;208442;208443;208444;208445 208445 4 LNHQAELLLK Unmodified 1177.6819 0.68190733 2086 Q03001 DST Dystonin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 47.666 47.781 3 0.013923 53707 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 46.406 32.713 34276000 0 0 0 0 2869900 5452600 3542500 3445100 3983100 0 4945500 0 6292500 3745300 0 31220 2086 28485 262505;262506;262507;262508;262509;262510;262511;262512 208446 208446 1 LNHQGELMLK Unmodified 1181.6227 0.62267789 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS By MS/MS 2 0 4 2 2 43.659 38.329 2;3 0.00069456 52825 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 106.4 83.758 77470000 65106000 0 12364000 0 0 0 0 0 0 0 0 0 0 0 0 31221 5049 28486 262513;262514;262515;262516 208447;208448;208449 208447 2 LNHVAAGLVSPSLK Unmodified 1404.8089 0.80889876 2115 Q05519 SRSF11 Serine/arginine-rich splicing factor 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 3 24 1 1 1 2 2 2 2 2 2 2 2 2 2 2 2 58.395 57.837 2;3 5.4387E-27 65128 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 156.73 141.79 1333100000 103750000 30540000 13434000 63868000 76364000 65151000 84698000 88903000 67119000 93783000 97386000 146440000 91516000 119930000 190220000 31222 2115 28487 262517;262518;262519;262520;262521;262522;262523;262524;262525;262526;262527;262528;262529;262530;262531;262532;262533;262534;262535;262536;262537;262538;262539;262540;262541;262542;262543 208450;208451;208452;208453;208454;208455;208456;208457;208458;208459;208460;208461;208462;208463;208464;208465;208466;208467;208468;208469;208470;208471;208472;208473;208474;208475;208476;208477;208478;208479;208480;208481;208482;208483;208484;208485;208486;208487 208454 36 LNHYLEDKPSPPPVK Unmodified 1732.9148 0.91482039 3284 Q8IYI6 EXOC8 Exocyst complex component 8 yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 51.722 45.046 3;4 0.0036715 62300 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.403 70.32 133130000 126210000 0 6923600 0 0 0 0 0 0 0 0 0 0 0 0 31223 3284 28488 262544;262545;262546 208488;208489 208489 0 LNIANMK Unmodified 802.43711 0.43710895 4688 Q9NVZ3 NECAP2 Adaptin ear-binding coat-associated protein 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 42.293 40.992 2 0.02854 53339 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.957 33.96 64436000 11405000 16509000 1142800 0 0 5090700 2546400 2666800 0 4963600 4527800 2971100 0 4754800 7858400 31224 4688 28489 262547;262548;262549;262550;262551;262552;262553;262554;262555;262556;262557 208490;208491;208492 208490 3 LNIDSIIQR Unmodified 1070.6084 0.60840804 1381 P36873 PPP1CC Serine/threonine-protein phosphatase PP1-gamma catalytic subunit yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 76.623 76.814 2 0.0039848 88213 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.294 53.093 25542000 0 0 0 0 0 0 1854100 0 0 3234700 6025300 6191300 0 0 8236700 31225 1381 28490 262558;262559;262560;262561;262562 208493;208494 208493 2 LNIDTRNCK Unmodified 1132.5659 0.56589129 1836 P61160 ACTR2 Actin-related protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 23.037 19.102 2 0.0022815 24258 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 178.94 42.83 149090000 112520000 9413100 27163000 0 0 0 0 0 0 0 0 0 0 0 0 31226 1836 28491 262563;262564;262565 208495;208496;208497 208497 2 LNIGDLQVTK Unmodified 1099.6237 0.62372375 5036 Q9UNM6 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 72.379 71.14 2 1.1616E-08 88793 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 157.59 94.873 1565800000 26865000 754230000 0 36530000 57444000 69366000 19093000 22362000 16266000 131370000 139550000 179700000 21606000 26976000 64474000 31227 5036 28492 262566;262567;262568;262569;262570;262571;262572;262573;262574;262575;262576;262577;262578;262579;262580;262581;262582 208498;208499;208500;208501;208502;208503;208504;208505;208506;208507;208508;208509;208510;208511;208512;208513 208501 15 LNIGGGGLGYR Unmodified 1075.5774 0.57744226 3199 Q86XP3 DDX42 ATP-dependent RNA helicase DDX42 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 57.558 57.821 2 4.0427E-05 64910 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 116.73 70.3 120190000 0 0 0 0 0 16092000 0 11206000 0 21739000 20789000 0 20887000 0 29481000 31228 3199 28493 262583;262584;262585;262586;262587;262588;262589 208514;208515;208516;208517;208518;208519;208520;208521 208517 8 LNIGHLPSAK Unmodified 1048.6029 0.60292873 3283 Q8IYH5 ZZZ3 ZZ-type zinc finger-containing protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 47.193 47.417 2 0.0039092 52708 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 74.772 46.349 47219000 0 0 0 0 3627200 2831300 3343200 1962400 1666000 7645500 6424300 11134000 0 3312300 5272400 31229 3283 28494 262590;262591;262592;262593;262594;262595;262596;262597;262598;262599 208522;208523;208524;208525 208524 4 LNIGYIEDLK Unmodified 1176.639 0.63903946 799 P05120 SERPINB2 Plasminogen activator inhibitor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.448 80.509 2 0.0045025 92908 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 72.607 38.354 44683000 0 0 0 5727900 1969700 2302800 1269600 10625000 1848700 4891700 2711500 5066800 3566100 1681800 3022000 31230 799 28495 262600;262601;262602;262603;262604;262605;262606;262607;262608;262609;262610;262611 208526;208527;208528;208529;208530 208527 5 LNIHSIIK Unmodified 936.57565 0.57565135 2993 Q6XZF7 DNMBP Dynamin-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 56.659 56.964 2 0.022739 64235 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 60.91 16.463 15335000 0 0 0 0 0 0 5104300 0 0 0 0 0 0 3328300 6902000 31231 2993 28496 262612;262613;262614 208531 208531 1 LNILDTLSK Unmodified 1015.5914 0.59136099 2252 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.266 79.327 2 1.2768E-05 91917 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 154.12 87.689 859660000 0 0 0 43670000 56818000 78065000 24603000 29387000 20510000 138460000 126090000 181440000 32595000 43951000 84087000 31232 2252 28497 262615;262616;262617;262618;262619;262620;262621;262622;262623;262624;262625;262626 208532;208533;208534;208535;208536;208537;208538;208539;208540;208541;208542;208543;208544;208545;208546 208546 14 LNILEIVK Unmodified 940.59572 0.59571809 2128 Q06546 GABPA GA-binding protein alpha chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85.981 85.283 2 0.011137 109027 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.31 18.403 144350000 33561000 0 7157200 2095900 3720700 13990000 6290600 5429800 8681100 10115000 9909400 8866300 6564400 7115900 20851000 31233 2128 28498 262627;262628;262629;262630;262631;262632;262633;262634;262635;262636;262637;262638;262639;262640 208547;208548;208549;208550;208551;208552;208553 208549 7 LNIMAAK Oxidation (M) 775.42621 0.42620992 1340 P35221 CTNNA1 Catenin alpha-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 2 1 1 1 1 25.619 25.72 2 0.036362 27826 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 57.335 30.214 173100000 0 0 0 21373000 17154000 26837000 24216000 0 16195000 23983000 18689000 24655000 0 0 0 31234 1340 28499 262641;262642;262643;262644;262645;262646;262647;262648;262649 208554;208555;208556;208557 208554 4 LNIMAAK Unmodified 759.4313 0.43129529 1340 P35221 CTNNA1 Catenin alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 39.885 40.16 2 0.023496 43356 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 92.319 61.578 216600000 0 0 0 0 13999000 0 16265000 21779000 0 31994000 46149000 27454000 29381000 0 29582000 31235 1340 28499 262650;262651;262652;262653;262654;262655;262656;262657 208558;208559;208560;208561;208562 208558 5 LNINPEDGMADYSDPSYVK Oxidation (M) 2142.9416 0.94156501 4010 Q99459 CDC5L Cell division cycle 5-like protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 68.579 67.909 2 7.6848E-12 78607 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 86.803 78.699 152730000 0 62598000 0 6260600 6021900 7324400 6934200 5176300 7403100 13226000 8246100 9039500 7721400 5273000 7506500 31236 4010 28500 262658;262659;262660;262661;262662;262663;262664;262665;262666;262667;262668;262669;262670;262671 208563;208564;208565;208566;208567;208568;208569;208570;208571;208572;208573;208574;208575;208576 208572 5496 14 LNINPEDGMADYSDPSYVK Unmodified 2126.9467 0.94665039 4010 Q99459 CDC5L Cell division cycle 5-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 2 1 1 1 1 1 1 1 77.636 76.203 2;3 4.4989E-77 93224 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 208.23 200.32 247470000 0 206860000 0 0 0 0 0 0 0 0 10608000 7279900 0 6165100 16561000 31237 4010 28500 262672;262673;262674;262675;262676;262677;262678;262679;262680 208577;208578;208579;208580;208581;208582;208583;208584;208585;208586 208579 9 LNIPATNVFANR Unmodified 1328.7201 0.72008375 1972 P78330 PSPH Phosphoserine phosphatase yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 77.858 77.754 2 0.0028161 89375 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.228 34.78 33433000 0 0 0 4848900 0 0 0 0 0 0 0 0 0 0 28584000 31238 1972 28501 262681;262682 208587 208587 1 LNIPATNVFANRLK Unmodified 1569.8991 0.89911075 1972 P78330 PSPH Phosphoserine phosphatase yes yes 0 0 1 By MS/MS 2 0 1 1 85.614 77.484 3 0.00071862 101091 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.622 50.195 9018600 9018600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31239 1972 28502 262683 208588 208588 1 LNIPVSQVNPR Unmodified 1235.6986 0.69862003 792 P05023;P13637 ATP1A1;ATP1A3 Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-3 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.666 62.761 2 0.0043129 71464 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 61.78 39.693 131810000 0 0 0 7827100 8847600 7919500 7805400 8123000 7106200 12343000 14900000 17850000 14349000 11184000 13555000 31240 792 28503 262684;262685;262686;262687;262688;262689;262690;262691;262692;262693;262694;262695 208589;208590;208591;208592;208593;208594;208595;208596;208597;208598;208599 208597 9 LNIQPSEADYAVDIR Unmodified 1702.8526 0.85261407 4751 Q9NYU2 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes yes 0 0 0 By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.552 76.66 2 4.4698E-22 88077 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 134.99 98.565 100840000 0 0 0 0 3817500 9271200 4057300 5649400 4403300 12034000 13017000 11713000 5939900 8908600 22025000 31241 4751 28504 262696;262697;262698;262699;262700;262701;262702;262703;262704;262705;262706 208600;208601;208602 208602 0 LNISFPATGCQK Unmodified 1334.6653 0.66527099 1909 P62753 RPS6 40S ribosomal protein S6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70.341 69.559 2 2.426E-16 80802 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 148.32 119.23 1100000000 147650000 18079000 0 42021000 55498000 50323000 51026000 55027000 62651000 75866000 83545000 143500000 102830000 91520000 120490000 31242 1909 28505 262707;262708;262709;262710;262711;262712;262713;262714;262715;262716;262717;262718;262719;262720 208603;208604;208605;208606;208607;208608;208609;208610;208611;208612;208613;208614;208615;208616;208617;208618 208617 15 LNITPTK Unmodified 785.4647 0.46470391 3038 Q7KZ85 SUPT6H Transcription elongation factor SPT6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 30.963 29.873 2 0.021122 38649 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.63 35.323 232810000 10766000 150770000 2475300 0 0 5190000 0 4515400 4496500 8345700 8833700 0 12003000 9243800 16171000 31243 3038 28506 262721;262722;262723;262724;262725;262726;262727;262728;262729;262730;262731 208619;208620 208619 2 LNITSLQFK Unmodified 1062.6073 0.6073454 2666 Q3B726 TWISTNB DNA-directed RNA polymerase I subunit RPA43 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 77.014 77.156 2 0.010868 88650 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.673 41.991 28220000 0 0 0 0 0 3056300 2197900 2485900 0 5207100 0 3677600 2990300 2846700 5757800 31244 2666 28507 262732;262733;262734;262735;262736;262737;262738;262739;262740 208621;208622;208623;208624;208625;208626 208623 6 LNITVVQAK Unmodified 984.59678 0.59678072 4324 Q9H0E2 TOLLIP Toll-interacting protein yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 54.337 54.219 2 0.017806 61633 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 55.37 30.476 50445000 0 0 0 19216000 4900300 4247900 5632100 11057000 0 5391700 0 0 0 0 0 31245 4324 28508 262741;262742;262743;262744;262745;262746 208627;208628 208627 1 LNIWDVGGQK Unmodified 1128.5928 0.59275797 1370 P36404 ARL2 ADP-ribosylation factor-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 77.498 73.749 2 0.0074264 91982 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.219 58.368 57658000 0 53479000 4179500 0 0 0 0 0 0 0 0 0 0 0 0 31246 1370 28509 262747;262748 208629 208629 1 LNIWGEAR Unmodified 957.50321 0.50321468 2189 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 61.399 61.749 2 0.02323 69571 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.508 31.996 45488000 0 0 0 0 0 0 0 0 0 7590200 8243500 7293800 9460100 0 12901000 31247 2189 28510 262749;262750;262751;262752;262753 208630;208631;208632 208631 3 LNKPFLFDTK Unmodified 1221.6758 0.67575932 1227 P27824 CANX Calnexin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 63.548 63.826 3 0.010288 72398 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 50.194 37.103 83378000 0 0 0 0 0 0 11712000 15389000 1953400 0 8704300 24840000 7411600 2255000 11112000 31248 1227 28511 262754;262755;262756;262757;262758;262759;262760;262761 208633;208634 208634 2 LNLAFVANLFNK Unmodified 1362.766 0.76597131 986 P13797 PLS3 Plastin-3 yes yes 0 0 0 By MS/MS 3 0 1 1 98.983 95.632 2 0.016378 114722 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 57.859 47.029 1912100 0 1912100 0 0 0 0 0 0 0 0 0 0 0 0 0 31249 986 28512 262762 208635 208635 1 LNLAPAATTSNEPSGNNPPTHLSLDPTNAENTASQSPR Unmodified 3883.8573 0.85726511 4872 Q9UER7 DAXX Death domain-associated protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 2 2 2 2 2 2 1 2 2 2 2 75.884 75.964 3;4 4.2596E-98 87292 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.63 97.829 396690000 0 0 0 7834400 31646000 53899000 25942000 23172000 33706000 55238000 19135000 37565000 28605000 28116000 51828000 31250 4872 28513 262763;262764;262765;262766;262767;262768;262769;262770;262771;262772;262773;262774;262775;262776;262777;262778;262779;262780;262781;262782;262783;262784 208636;208637;208638;208639;208640;208641;208642;208643;208644;208645;208646;208647;208648;208649;208650;208651;208652;208653;208654;208655;208656;208657 208641 22 LNLAQFLNEDLS Unmodified 1375.6983 0.69834526 4079 Q9BPX3 NCAPG Condensin complex subunit 3 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 98.597 94.555 2 1.0353E-08 116539 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 146.81 132.14 190530000 0 190530000 0 0 0 0 0 0 0 0 0 0 0 0 0 31251 4079 28514 262785;262786 208658;208659 208658 1 LNLDSIIGR Unmodified 999.57129 0.57129425 1872 P62136 PPP1CA Serine/threonine-protein phosphatase PP1-alpha catalytic subunit yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.158 80.216 2 0.0031541 92790 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 92.439 46.721 90113000 0 0 0 2044100 2800700 4324900 3429900 4741100 5688000 6475700 11737000 12540000 6306400 8528800 21496000 31252 1872 28515 262787;262788;262789;262790;262791;262792;262793;262794;262795;262796;262797;262798 208660;208661;208662;208663;208664;208665;208666;208667;208668 208663 9 LNLEAINYMAADGDFK Oxidation (M) 1799.84 0.84000047 881 P09382 LGALS1 Galectin-1 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 80.897 81.063 2 2.5253E-15 93592 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 102.73 74.554 29731000 0 0 0 0 0 0 0 0 0 4394500 6154100 7391400 0 0 11791000 31253 881 28516 262799;262800;262801;262802 208669;208670;208671;208672 208670 1134 4 LNLEDILLRK Unmodified 1225.7394 0.73942221 5390 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 58.448 58.675 3 0.011434 66698 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 33.875 7.0891 + 17882000 0 0 0 0 0 0 0 3232200 0 4876300 6086300 0 0 3687200 0 31254 5390 28517 262803;262804;262805;262806 208673;208674;208675;208676 208673 4 LNLEHIATSSAVSK Unmodified 1468.7886 0.78855725 3961 Q96QK1 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.37 3.72 8 1 18 3 3 3 1 1 2 2 1 1 1 2 2 1 2 2 59.715 57.886 2;3 7.9013E-121 76693 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 240.92 166.38 4055300000 2063400000 1168700000 579720000 11790000 8593500 15926000 15900000 13363000 6412500 11522000 34825000 28176000 10177000 20032000 66753000 31255 3961 28518 262807;262808;262809;262810;262811;262812;262813;262814;262815;262816;262817;262818;262819;262820;262821;262822;262823;262824;262825;262826;262827;262828;262829;262830;262831;262832;262833 208677;208678;208679;208680;208681;208682;208683;208684;208685;208686;208687;208688;208689;208690;208691;208692;208693;208694;208695;208696;208697;208698;208699 208679 18 LNLESSNSK Unmodified 990.49819 0.49818889 1273 P30260 CDC27 Cell division cycle protein 27 homolog yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 19.502 19.78 2 0.0038754 19908 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 96.948 63.151 87342000 0 0 0 0 8116000 9657200 0 0 0 12185000 12884000 13905000 0 12238000 18357000 31256 1273 28519 262834;262835;262836;262837;262838;262839;262840 208700;208701;208702;208703;208704;208705 208702 6 LNLGTDSDSSPQK Unmodified 1360.647 0.64703797 2603 Q16512 PKN1 Serine/threonine-protein kinase N1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.47 2 1 14 1 1 1 1 1 1 1 1 2 2 1 1 1 31.754 31.665 2 5.5363E-05 34440 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 107.06 94.819 162790000 0 21220000 0 9339700 8123100 10493000 9857300 9133100 8935200 8792500 24907000 21494000 9634000 8718400 12144000 31257 2603 28520 262841;262842;262843;262844;262845;262846;262847;262848;262849;262850;262851;262852;262853;262854;262855 208706;208707;208708;208709;208710;208711;208712;208713;208714;208715;208716;208717;208718 208713 13 LNLGTVGFYR Unmodified 1138.6135 0.61349341 1771 P55786 NPEPPS Puromycin-sensitive aminopeptidase yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 77.274 77.358 2 0.001504 89848 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 90.657 67.585 71233000 0 0 0 5351600 0 0 0 1732000 0 0 9021500 8651800 0 8062500 38413000 31258 1771 28521 262856;262857;262858;262859;262860;262861 208719;208720;208721;208722;208723 208723 4 LNLHYAVVSK Unmodified 1142.6448 0.64479354 1528 P47897 QARS Glutamine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 50.391 50.776 3 0.0025679 56122 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.306 52.22 122700000 0 0 0 0 0 0 10222000 14372000 0 0 16133000 20128000 0 12529000 49317000 31259 1528 28522 262862;262863;262864;262865;262866;262867 208724;208725 208724 2 LNLIPRVDGEYDLK Unmodified 1643.8883 0.88827129 4358 Q9H267 VPS33B Vacuolar protein sorting-associated protein 33B yes yes 0 0 1 By MS/MS 2 0 1 1 85.272 77.142 3 0.0085623 100826 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.112 20.776 18333000 18333000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31260 4358 28523 262868 208726 208726 1 LNLLETK Unmodified 829.49092 0.49091866 3133 Q86TB9 PATL1 Protein PAT1 homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 51.245 51.401 2 0.016683 57134 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 115.46 46.759 1713000000 0 0 0 159270000 97511000 0 118930000 154080000 110680000 162410000 166530000 172140000 131310000 156330000 283850000 31261 3133 28524 262869;262870;262871;262872;262873;262874;262875;262876;262877;262878;262879 208727;208728;208729;208730;208731;208732;208733;208734 208733 8 LNLMYIDSIDLEK Oxidation (M) 1581.796 0.79601039 4598 Q9NRF8 CTPS2 CTP synthase 2 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 89.392 85.339 2 6.9308E-06 106101 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.35 84.182 75102000 0 75102000 0 0 0 0 0 0 0 0 0 0 0 0 0 31262 4598 28525 262880;262881 208735 208735 6002 1 LNLMYIDSIDLEK Unmodified 1565.8011 0.80109577 4598 Q9NRF8 CTPS2 CTP synthase 2 yes yes 0 0 0 By MS/MS 2 0 1 1 94.784 86.654 2 0.021617 112066 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.408 24.686 10009000 10009000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31263 4598 28525 262882 208736 208736 1 LNLNNTVLSK Unmodified 1114.6346 0.63462279 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 2 1 1 1 1 1 57.55 57.669 2 0.00046615 66350 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 135.71 74.913 1059600000 0 0 0 42029000 59036000 89025000 63611000 58153000 43744000 102060000 126990000 126640000 74938000 93643000 179760000 31264 848 28526 262883;262884;262885;262886;262887;262888;262889;262890;262891;262892;262893;262894;262895 208737;208738;208739;208740;208741;208742;208743;208744;208745;208746;208747;208748;208749;208750;208751;208752;208753;208754;208755;208756;208757 208757 21 LNLPDYYK Unmodified 1024.5229 0.52294707 441 O60885 BRD4 Bromodomain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 6 4 2 2 1 1 1 1 68.016 64.882 2 0.012605 74410 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 74.255 20.904 216060000 0 199710000 3376700 0 0 0 12976000 0 0 0 0 0 0 0 0 31265 441 28527 262896;262897;262898;262899 208758;208759;208760 208758 2 LNLQDGR Unmodified 814.42972 0.42971539 398 O60343 TBC1D4 TBC1 domain family member 4 yes yes 0 0 0 By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 23.014 23.293 2 0.04393 24365 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 67.032 25.53 64558000 0 0 0 6917300 0 6854700 0 3610300 3600700 5949100 6783800 7623500 6574900 6016200 10627000 31266 398 28528 262900;262901;262902;262903;262904;262905;262906;262907;262908;262909 208761 208761 1 LNLQETR Unmodified 872.47158 0.4715802 5349 yes yes 0 0 0 By MS/MS 10 0 1 1 26.613 26.938 2 0.049251 27573 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 64.236 22.142 + 20175000 0 0 0 0 0 0 0 0 0 0 0 0 0 20175000 0 31267 5349 28529 262910 208762 208762 1 LNLQNIGR Unmodified 926.52976 0.52976379 3197 Q86XL3 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 51.669 51.435 2 0.03661 58754 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 51.787 17.082 6945800 0 0 0 0 3951500 0 2994300 0 0 0 0 0 0 0 0 31268 3197 28530 262911;262912 208763 208763 1 LNLSQVR Unmodified 828.48175 0.48175096 3608 Q92499 DDX1 ATP-dependent RNA helicase DDX1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.028 40.208 2 0.0174 45522 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 114.02 31.76 632020000 0 0 0 43361000 31604000 54464000 48431000 43339000 29781000 71847000 64643000 73236000 44602000 45016000 81699000 31269 3608 28531 262913;262914;262915;262916;262917;262918;262919;262920;262921;262922;262923;262924 208764;208765;208766;208767;208768;208769;208770 208769 6 LNLSSNELK Unmodified 1016.5502 0.55022446 4468 Q9H9A6 LRRC40 Leucine-rich repeat-containing protein 40 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 45.895 46.08 2 0.00022377 52390 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 132.76 49.005 690180000 0 0 0 0 53424000 75940000 69830000 62078000 51708000 79764000 76739000 0 72743000 55349000 92607000 31270 4468 28532 262925;262926;262927;262928;262929;262930;262931;262932;262933;262934 208771;208772;208773;208774;208775;208776;208777;208778;208779 208779 3 LNLSTRPEK Unmodified 1056.5928 0.59275797 1209 P26639 TARS Threonine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 30.741 26.242 2 2.3404E-05 36681 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 174.52 76.101 336320000 318850000 0 17467000 0 0 0 0 0 0 0 0 0 0 0 0 31271 1209 28533 262935;262936 208780;208781 208780 2 LNLVDLAGSENIGR Unmodified 1469.7838 0.78380622 1695 P52732 KIF11 Kinesin-like protein KIF11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.138 82.199 2 0.00026866 95124 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 98.105 82.533 125770000 0 0 0 2313500 5135700 12188000 7214000 8929500 6564900 17428000 12369000 15247000 7619200 11538000 19227000 31272 1695 28534 262937;262938;262939;262940;262941;262942;262943;262944;262945;262946;262947;262948 208782;208783;208784;208785;208786;208787;208788;208789;208790;208791;208792;208793;208794;208795;208796 208796 15 LNLVDLAGSENIGRSGAVDK Unmodified 2027.0647 0.064732107 1695 P52732 KIF11 Kinesin-like protein KIF11 yes yes 0 0 1 By MS/MS 2 0 1 1 81.242 78.714 3 6.0992E-05 95472 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 61.648 36.329 3586200 0 0 3586200 0 0 0 0 0 0 0 0 0 0 0 0 31273 1695 28535 262949 208797 208797 1 LNLVDLAGSER Unmodified 1185.6354 0.63535107 247 O15066;O14782 KIF3B;KIF3C Kinesin-like protein KIF3B;Kinesin-like protein KIF3B, N-terminally processed;Kinesin-like protein KIF3C no no 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 75.96 75.844 2 0.0055796 87525 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 58.699 0 12046000 0 0 0 0 3639300 0 0 0 0 8406400 0 0 0 0 0 31274 247 28536 262950;262951;262952 208798;208799 208798 2 LNLVVKPLEK Unmodified 1151.7278 0.72779489 948 P11441 UBL4A Ubiquitin-like protein 4A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 62.861 62.278 3 0.002668 86843 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.355 68.637 132720000 22154000 0 0 7478600 9506400 0 10657000 11404000 3585600 7275800 13574000 18243000 10518000 5278500 13045000 31275 948 28537 262953;262954;262955;262956;262957;262958;262959;262960;262961;262962;262963;262964 208800;208801;208802;208803;208804;208805;208806;208807;208808 208802 5 LNMELSEK Oxidation (M) 978.4692 0.46919694 1260 P30040 ERP29 Endoplasmic reticulum resident protein 29 yes yes 0 1 0 By MS/MS 3 0 1 1 21.824 17.936 2 0.01868 22298 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 84.568 28.557 26405000 0 26405000 0 0 0 0 0 0 0 0 0 0 0 0 0 31276 1260 28538 262965 208809 208809 1858 1 LNMELSEK Unmodified 962.47428 0.47428232 1260 P30040 ERP29 Endoplasmic reticulum resident protein 29 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 46.305 40.646 2 0.012181 51828 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 104.75 48.625 1322400000 31999000 1278200000 12125000 0 0 0 0 0 0 0 0 0 0 0 0 31277 1260 28538 262966;262967;262968 208810;208811 208811 2 LNMILVQILK Oxidation (M) 1199.7312 0.73116571 237 O14980 XPO1 Exportin-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 89.604 86.947 2 0.0044113 101157 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 64.265 52.671 10145000 5514000 0 0 0 0 2651800 0 0 0 1978900 0 0 0 0 0 31278 237 28539 262969;262970;262971 208812;208813;208814 208813 317 3 LNMTPEEAER Oxidation (M) 1204.5394 0.53940177 1809 P60228 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 18.713 18.876 2 0.01168 19209 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 48.794 6.6852 24915000 0 0 0 4477800 0 0 3970000 0 0 0 8810900 0 0 7656700 0 31279 1809 28540 262972;262973;262974;262975 208815;208816 208815 2932 2 LNNCGMGIGGGK Oxidation (M) 1192.5329 0.53287661 1495 P46060 RANGAP1 Ran GTPase-activating protein 1 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS 5.4 3.77 2 1 2 1 2 1 1 17.626 13.807 2 0.0011154 17560 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.177 63.401 39539000 2574100 36965000 0 0 0 0 0 0 0 0 0 0 0 0 0 31280 1495 28541 262976;262977;262978;262979;262980 208817;208818;208819;208820;208821 208817 2355 5 LNNCGMGIGGGK Unmodified 1176.538 0.53796198 1495 P46060 RANGAP1 Ran GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.25 3.34 2 1 1 1 2 1 34.123 28.955 2 0.023205 32551 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 54.066 39.929 187000000 17232000 169760000 0 0 0 0 0 0 0 0 0 0 0 0 0 31281 1495 28541 262981;262982;262983;262984 208822;208823;208824 208824 3 LNNEEHNELREVDGTAK Unmodified 1966.9344 0.93444622 2313 Q13546 RIPK1 Receptor-interacting serine/threonine-protein kinase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 4 12 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 31.026 30.051 3;4 1.1496E-18 32285 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 88.992 67.947 312120000 12988000 18516000 106420000 8527200 7792300 10637000 10957000 14956000 12437000 16223000 14742000 13921000 23455000 21735000 18810000 31282 2313 28542 262985;262986;262987;262988;262989;262990;262991;262992;262993;262994;262995;262996;262997;262998;262999;263000 208825;208826;208827;208828;208829;208830;208831;208832;208833;208834;208835;208836;208837;208838 208836 14 LNNEYEVIK Unmodified 1120.5764 0.57643921 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 44.849 45.02 2 0.001913 50570 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 140.5 66.374 437200000 0 0 0 25020000 23909000 22428000 36606000 28617000 29093000 31558000 42716000 42848000 56095000 41947000 56367000 31283 2556 28543 263001;263002;263003;263004;263005;263006;263007;263008;263009;263010;263011;263012 208839;208840;208841;208842;208843;208844;208845;208846;208847;208848;208849;208850;208851;208852;208853;208854;208855;208856 208852 17 LNNLVLFDK Unmodified 1074.6073 0.6073454 1917 P62851 RPS25 40S ribosomal protein S25 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 76.825 75.694 2 1.6146E-05 87634 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 153.08 112.97 2427400000 538270000 409810000 57926000 73382000 89274000 90528000 86416000 76655000 79983000 120810000 133920000 192240000 130070000 151530000 196590000 31284 1917 28544 263013;263014;263015;263016;263017;263018;263019;263020;263021;263022;263023;263024;263025;263026;263027;263028 208857;208858;208859;208860;208861;208862;208863;208864;208865;208866;208867;208868;208869;208870;208871;208872;208873;208874;208875;208876;208877;208878 208878 22 LNNSLHFAQVR Unmodified 1297.6891 0.68911797 2465 Q14CX7 NAA25 N-alpha-acetyltransferase 25, NatB auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 2 2 2 1 1 1 48.389 48.623 2;3 0.00011269 54927 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 110.31 83.616 1380500000 0 0 0 0 0 0 384920000 467770000 448060000 13984000 26693000 39078000 0 0 0 31285 2465 28545 263029;263030;263031;263032;263033;263034;263035;263036;263037 208879;208880;208881;208882;208883;208884;208885;208886 208885 7 LNNTTVLYLK Unmodified 1177.6707 0.67067394 4498 Q9HB90;Q9NQL2 RRAGC;RRAGD Ras-related GTP-binding protein C;Ras-related GTP-binding protein D yes no 0 0 0 By MS/MS 2 0 1 1 72.935 64.739 2 0.0031586 85717 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.431 65.076 29208000 29208000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31286 4498 28546 263038 208887 208887 1 LNPADAPNPVVFVATK Unmodified 1651.8934 0.89335667 583 O94776 MTA2 Metastasis-associated protein MTA2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.43 3.14 5 1 24 1 3 2 2 2 2 2 2 2 2 2 2 2 2 2 82.896 82.083 2;3 1.9658E-27 95271 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 130.77 121.34 3180100000 19454000 1869900000 30499000 60885000 72863000 116410000 84928000 79520000 69666000 131970000 123930000 152810000 47032000 133440000 186820000 31287 583 28547 263039;263040;263041;263042;263043;263044;263045;263046;263047;263048;263049;263050;263051;263052;263053;263054;263055;263056;263057;263058;263059;263060;263061;263062;263063;263064;263065;263066;263067;263068 208888;208889;208890;208891;208892;208893;208894;208895;208896;208897;208898;208899;208900;208901;208902;208903;208904;208905;208906;208907;208908;208909 208908 19 LNPAVTCAGK Unmodified 1029.5277 0.52771487 3496 Q8TD19 NEK9 Serine/threonine-protein kinase Nek9 yes yes 0 0 0 By matching By matching By MS/MS By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 24.824 24.983 2 0.045604 27042 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 38.303 14.875 21544000 0 0 0 3231800 1744600 2677900 0 0 0 0 3435600 0 3069400 0 7384400 31288 3496 28548 263069;263070;263071;263072;263073;263074 208910 208910 1 LNPDFSDAK Unmodified 1005.4767 0.47672516 2929 Q6P2P2 PRMT9 Putative protein arginine N-methyltransferase 9 yes yes 0 0 0 By MS/MS 2 0 1 1 39.245 34.233 2 0.02624 44918 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.812 48.284 40574000 0 40574000 0 0 0 0 0 0 0 0 0 0 0 0 0 31289 2929 28549 263075 208911 208911 1 LNPEDIK Unmodified 827.43888 0.43888309 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.223 32.41 2 0.020538 35582 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 108.24 41.244 5916600000 0 0 0 130680000 292130000 430230000 1005000000 1374000000 1430800000 252700000 408280000 475310000 16087000 27017000 74443000 31290 1714 28550 263076;263077;263078;263079;263080;263081;263082;263083;263084;263085;263086;263087 208912;208913;208914;208915;208916;208917;208918;208919;208920;208921 208918 10 LNPEDIKK Unmodified 955.53385 0.53384611 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 3 9 1 1 1 1 1 1 1 1 1 1 1 1 24.475 23.494 2 0.016716 25430 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 120.49 73.825 2613000000 41873000 512620000 25875000 72935000 167030000 43273000 528780000 527640000 219410000 87062000 121760000 264730000 0 0 0 31291 1714 28551 263088;263089;263090;263091;263092;263093;263094;263095;263096;263097;263098;263099 208922;208923;208924;208925;208926;208927;208928;208929;208930;208931 208931 0 LNPFGNTFLNR Unmodified 1291.6673 0.6673199 4777 Q9NZN4 EHD2 EH domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.642 80.703 2 0.00015167 92930 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 108.98 92.775 84956000 0 0 0 3364200 2291100 13415000 4886300 6020200 5174600 8828200 7428500 8143000 4624900 4548300 16231000 31292 4777 28552 263100;263101;263102;263103;263104;263105;263106;263107;263108;263109;263110;263111 208932;208933;208934;208935;208936;208937;208938;208939;208940;208941;208942 208935 11 LNPINTTLLK Unmodified 1125.6758 0.67575932 4889 Q9UGV2 NDRG3 Protein NDRG3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.71 72.779 2 0.0029937 84018 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 78.113 53.958 307570000 0 0 0 13920000 17518000 34654000 22149000 16732000 12041000 39628000 26792000 27725000 22794000 23934000 49687000 31293 4889 28553 263112;263113;263114;263115;263116;263117;263118;263119;263120;263121;263122;263123 208943;208944;208945;208946;208947;208948 208946 3 LNPIVVK Unmodified 781.50617 0.5061748 3663 Q92797 SYMPK Symplekin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 50.933 45.046 2 0.031292 58443 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.903 38.866 142940000 44688000 92206000 6041300 0 0 0 0 0 0 0 0 0 0 0 0 31294 3663 28554 263124;263125;263126 208949 208949 1 LNPNFLQLSTGSVDK Unmodified 1631.8519 0.85188578 675 O95628 CNOT4 CCR4-NOT transcription complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 81.803 81.233 2 0.00024165 94365 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 88.101 70.88 186920000 7788300 0 0 4483500 6101600 7853800 7842600 7217800 11217000 22027000 20995000 15891000 11667000 15474000 48361000 31295 675 28555 263127;263128;263129;263130;263131;263132;263133;263134;263135;263136;263137;263138;263139 208950;208951;208952;208953;208954;208955;208956;208957;208958;208959;208960;208961;208962;208963;208964;208965 208963 16 LNPNFLVDFGK Unmodified 1262.6659 0.66592292 2256 Q13228 SELENBP1 Selenium-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 6.12 3.89 3 1 4 1 2 1 1 1 1 1 89.042 86.778 2 0.0021905 100356 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.847 47.848 860120000 325120000 421950000 27756000 0 0 0 0 0 0 0 9944700 10809000 0 7956900 56584000 31296 2256 28556 263140;263141;263142;263143;263144;263145;263146;263147 208966;208967;208968;208969;208970;208971;208972;208973;208974 208967 7 LNPNLYDNGK Unmodified 1146.5669 0.56693715 4287 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 38.233 38.134 2 0.003743 42420 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 75.378 25.252 11037000 0 0 0 2172500 0 4320400 0 4543900 0 0 0 0 0 0 0 31297 4287 28557 263148;263149;263150 208975;208976 208975 2 LNPQEYLTSTACR Unmodified 1551.7351 0.73514147 3687;3475 Q8TAQ2;Q92922 SMARCC2;SMARCC1 SWI/SNF complex subunit SMARCC2;SWI/SNF complex subunit SMARCC1 no no 0 0 0 By MS/MS 10 0 1 1 67.532 67.729 2 0.02043 76765 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 46.706 24.508 2343800 0 0 0 0 0 0 0 0 0 0 0 0 0 2343800 0 31298 3475;3687 28558 263151 208977 208977 0 LNPQEYLTSTACRR Unmodified 1707.8363 0.8362525 3687;3475 Q8TAQ2;Q92922 SMARCC2;SMARCC1 SWI/SNF complex subunit SMARCC2;SWI/SNF complex subunit SMARCC1 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 61.094 61.209 3 0.0058459 69691 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 36.292 16.168 57930000 0 0 0 0 3789600 5361100 4572800 0 0 8213200 8951100 15738000 0 11304000 0 31299 3475;3687 28559 263152;263153;263154;263155;263156;263157;263158 208978;208979 208979 1 LNPTGAAPAGCAAHSAVAMGK Unmodified 1950.9404 0.94039999 3117 Q7Z6M1 RABEPK Rab9 effector protein with kelch motifs yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 53.727 46.427 2;3 7.2219E-09 60885 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.98 71.565 151630000 95178000 56456000 0 0 0 0 0 0 0 0 0 0 0 0 0 31300 3117 28560 263159;263160;263161 208980;208981;208982;208983 208981 4 LNPTGAAPAGCAAHSAVAMGK Oxidation (M) 1966.9353 0.93531461 3117 Q7Z6M1 RABEPK Rab9 effector protein with kelch motifs yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 42.263 37.062 3 0.00047033 50637 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.808 31.314 84461000 73315000 0 11146000 0 0 0 0 0 0 0 0 0 0 0 0 31301 3117 28560 263162;263163 208984 208984 4722 1 LNPTWNHPDQDTEAGFK Unmodified 1968.8966 0.89660415 4493 Q9HB07 C12orf10 UPF0160 protein MYG1, mitochondrial yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 54.81 54.987 3 0.00024046 61591 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.949 57.56 39459000 0 0 0 0 2095800 0 0 0 0 0 11143000 0 0 0 26220000 31302 4493 28561 263164;263165;263166 208985;208986;208987 208985 3 LNQALCLR Unmodified 986.53313 0.5331346 3964 Q96R06 SPAG5 Sperm-associated antigen 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 44.782 44.928 2 0.0079077 50282 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 88.029 48.366 6860800 0 0 0 0 0 0 0 0 6860800 0 0 0 0 0 0 31303 3964 28562 263167;263168;263169;263170;263171 208988;208989;208990;208991;208992;208993 208992 6 LNQALLDLHALGSAR Unmodified 1590.8842 0.88418897 765 P02792 FTL Ferritin light chain yes yes 0 0 0 By MS/MS 10 0 1 1 78.634 78.88 3 0.0010368 90710 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.89 38.765 17762000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17762000 31304 765 28563 263172 208994 208994 1 LNQDQLDAVSK Unmodified 1229.6252 0.62518031 2407 Q14444 CAPRIN1 Caprin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.587 38.767 2 1.9975E-21 43002 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 180.09 135.01 1537000000 0 0 0 129900000 107380000 109680000 118960000 88241000 83895000 137950000 153550000 184460000 128430000 109760000 184760000 31305 2407 28564 263173;263174;263175;263176;263177;263178;263179;263180;263181;263182;263183;263184 208995;208996;208997;208998;208999;209000;209001 208998 4 LNQDVLLVNESK Unmodified 1370.7405 0.74054442 5064 Q9UPZ3 HPS5 Hermansky-Pudlak syndrome 5 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 62.084 61.721 2 0.00091403 78112 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.306 58.435 165110000 0 77331000 0 4763800 4689400 9850700 5738000 5618600 5476600 7240400 8205400 11542000 7986800 6368600 10294000 31306 5064 28565 263185;263186;263187;263188;263189;263190;263191;263192;263193;263194;263195;263196;263197 209002;209003;209004;209005;209006;209007 209003 4 LNQESTAPK Unmodified 986.50327 0.50327426 2427 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 8.0198 8.1352 2 0.0035328 5875 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 94.806 56.484 44848000 0 0 0 3341200 1770400 4067800 3215200 3114100 0 4010600 8008200 5229500 6401000 0 5689600 31307 2427 28566 263198;263199;263200;263201;263202;263203;263204;263205;263206;263207 209008;209009;209010;209011;209012 209010 5 LNQIMVGTGNGLAK Unmodified 1414.7602 0.76023401 4693 Q9NW82 WDR70 WD repeat-containing protein 70 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60.847 59.925 2 2.7986E-29 76828 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.84 111.52 147130000 21194000 67615000 0 2224800 2693900 3458300 3060700 4003000 2850800 5154300 7181400 5851800 6182900 4359700 11303000 31308 4693 28567 263208;263209;263210;263211;263212;263213;263214;263215;263216;263217;263218;263219;263220;263221 209013;209014;209015;209016;209017;209018;209019;209020;209021;209022;209023;209024;209025 209017 13 LNQIMVGTGNGLAK Oxidation (M) 1430.7551 0.75514863 4693 Q9NW82 WDR70 WD repeat-containing protein 70 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 53.013 51.787 2 0.00014413 58693 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 80.763 70.24 124880000 10570000 26850000 0 4630300 3771400 4421000 0 7385700 3829000 9854900 9321200 18292000 9315300 5653400 10989000 31309 4693 28567 263222;263223;263224;263225;263226;263227;263228;263229;263230;263231;263232;263233;263234;263235 209026;209027;209028;209029;209030;209031;209032;209033;209034;209035;209036;209037;209038 209036 6094 13 LNQISHDIR Unmodified 1094.5833 0.58325592 481 O75342 ALOX12B Arachidonate 12-lipoxygenase, 12R-type yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 24.781 24.773 2 0.0037823 26396 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 88.948 55.151 7533100 0 0 0 6331500 0 0 0 1201600 0 0 0 0 0 0 0 31310 481 28568 263236;263237 209039 209039 1 LNQLVEAK Unmodified 913.52328 0.52328142 4943 Q9UJX2 CDC23 Cell division cycle protein 23 homolog yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 2 1 1 1 1 1 1 28.775 29.01 2 0.0063839 30987 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 101.33 32.152 115320000 0 0 0 0 6813400 11444000 7931100 0 11608000 9635200 9460600 14153000 14940000 10012000 19319000 31311 4943 28569 263238;263239;263240;263241;263242;263243;263244;263245;263246;263247;263248 209040;209041;209042;209043;209044;209045;209046;209047;209048;209049;209050 209048 11 LNQMDQDK Unmodified 990.44404 0.44404482 1590 P49736 MCM2 DNA replication licensing factor MCM2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 8.7616 7.8505 2 0.0025649 8964 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.46 70.432 233150000 12944000 208170000 0 0 1053600 0 1595800 0 0 1316900 0 0 0 2978000 5088800 31312 1590 28570 263249;263250;263251;263252;263253;263254;263255 209051;209052;209053 209051 3 LNQNLNDVLVGLEK Unmodified 1567.857 0.85697116 162 O00499 BIN1 Myc box-dependent-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 1 1 1 1 2 2 2 1 2 2 83.986 84.105 2;3 2.1592E-17 97412 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 124.39 90.464 129240000 0 0 0 0 3358100 5225800 4708500 7184400 8259500 18211000 17369000 15573000 5611200 10655000 33086000 31313 162 28571 263256;263257;263258;263259;263260;263261;263262;263263;263264;263265;263266;263267;263268;263269;263270;263271 209054;209055;209056;209057;209058;209059;209060;209061;209062;209063;209064;209065;209066 209055 13 LNQNSRSEAPNWATQDSGFY Unmodified 2284.0145 0.01448745 1809 P60228 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 0 0 1 By MS/MS 2.67 0.471 1 2 3 76.024 72.04 2;3 2.1309E-17 90128 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.3 101.41 69217000 0 69217000 0 0 0 0 0 0 0 0 0 0 0 0 0 31314 1809 28572 263272;263273;263274 209067;209068 209067 2 LNQPELVAQK Unmodified 1138.6346 0.63462279 2128 Q06546 GABPA GA-binding protein alpha chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 41.247 40.473 2 0.00050309 44089 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 164.77 134.35 637190000 0 413130000 1642600 10736000 8065600 17663000 14295000 13700000 12552000 22702000 27620000 25044000 19400000 19518000 31123000 31315 2128 28573 263275;263276;263277;263278;263279;263280;263281;263282;263283;263284;263285;263286;263287;263288;263289 209069;209070;209071;209072;209073;209074;209075;209076;209077;209078;209079;209080;209081;209082 209074 13 LNQPGTPTR Unmodified 982.51959 0.51959303 1373 P36507 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.697 16.867 2 0.0050879 16001 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 83.998 45.838 137100000 0 0 0 6247800 7607500 17124000 9606500 8070400 6335100 13289000 14506000 18280000 15312000 0 20720000 31316 1373 28574 263290;263291;263292;263293;263294;263295;263296;263297;263298;263299;263300;263301 209083;209084;209085;209086;209087;209088;209089;209090;209091;209092;209093 209088 4 LNQPPEDGISSVK Unmodified 1382.7042 0.70415892 355 O43684 BUB3 Mitotic checkpoint protein BUB3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.95 2 4 1 12 2 4 1 1 1 1 1 1 1 1 1 1 1 1 1 46.982 45.894 2 7.3871E-08 47339 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 117.52 85.585 4519700000 64264000 701330000 2218800 162670000 159740000 177640000 263760000 191050000 234720000 328430000 478660000 440320000 305240000 320160000 689480000 31317 355 28575 263302;263303;263304;263305;263306;263307;263308;263309;263310;263311;263312;263313;263314;263315;263316;263317;263318;263319;263320 209094;209095;209096;209097;209098;209099;209100;209101;209102;209103;209104;209105;209106;209107;209108;209109;209110;209111;209112;209113;209114;209115;209116;209117 209110 20 LNQPSAEK Unmodified 885.4556 0.45559579 2708 Q53SF7 COBLL1 Cordon-bleu protein-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 8.6758 8.8072 2 0.0074646 7256 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 89.55 46.55 47280000 0 0 0 3912100 2607500 2910800 3247000 0 2401500 3976700 10178000 5887000 3589600 2669100 5900700 31318 2708 28576 263321;263322;263323;263324;263325;263326;263327;263328;263329;263330;263331 209118;209119;209120;209121;209122;209123 209122 5 LNQQAEELQEIHEIQLQEK Unmodified 2319.1707 0.17065374 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.12 3.89 3 1 4 3 1 1 1 1 1 69.034 67.373 3;6 1.6266E-06 85636 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 70.414 66.227 176790000 0 122810000 0 0 0 0 0 0 7762500 10980000 9715300 0 0 0 25520000 31319 2291 28577 263332;263333;263334;263335;263336;263337;263338;263339 209124;209125;209126;209127;209128;209129;209130 209127 6 LNQQLLSK Unmodified 942.54983 0.54983053 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 34.675 33.867 2 0.0093078 36150 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 83.313 31.625 94461000 4219600 31531000 0 0 3249800 4766600 6341800 6862700 4590300 5167900 8410400 0 5931200 3867900 9522400 31320 2446 28578 263340;263341;263342;263343;263344;263345;263346;263347;263348;263349;263350;263351 209131;209132;209133;209134;209135;209136;209137 209136 7 LNQQMAK Unmodified 831.42727 0.42727255 1826 P61011 SRP54 Signal recognition particle 54 kDa protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 6.8 3.92 2 3 1 1 1 1 1 8.8258 7.5516 2 0.024239 6150 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 95.9 41.375 109670000 9252400 88702000 0 0 0 0 0 0 7346100 0 0 0 0 3693500 674550 31321 1826 28579 263352;263353;263354;263355;263356 209138;209139;209140 209139 3 LNQQPSQGLGPR Unmodified 1293.6789 0.67894722 1382 P36915 GNL1 Guanine nucleotide-binding protein-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 28.392 28.832 2 8.6156E-06 30090 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 109.29 76.398 58182000 0 0 0 0 0 0 0 0 0 11225000 0 16213000 9379500 5358500 16006000 31322 1382 28580 263357;263358;263359;263360;263361 209141;209142;209143;209144;209145 209142 4 LNQSDSIEDPNSPAGRR Unmodified 1854.882 0.88201671 3174 Q86VS8 HOOK3 Protein Hook homolog 3 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 28.866 29.144 3 7.6664E-08 31076 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 66.965 38.008 64652000 0 0 0 0 8137200 0 0 8832900 0 8311900 0 10985000 9662400 0 18722000 31323 3174 28581 263362;263363;263364;263365;263366;263367 209146;209147;209148;209149;209150 209149 5 LNQSPSLAPVK Unmodified 1152.6503 0.65027285 4371 Q9H2P0 ADNP Activity-dependent neuroprotector homeobox protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 41.91 42.034 2 0.0076235 47073 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 58.433 34.278 88202000 0 0 0 5724800 6944700 7708100 7405300 10186000 5266300 11905000 6997300 0 9199900 8152300 8711200 31324 4371 28582 263368;263369;263370;263371;263372;263373;263374;263375;263376;263377;263378 209151;209152;209153;209154 209152 4 LNQSSPDNVTDTK Unmodified 1417.6685 0.66850169 2164 Q08AD1 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.256 21.46 2 1.1576E-12 21900 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 147.37 109.28 125920000 0 0 0 8290000 7205600 14936000 12321000 6415500 7877200 9787300 11756000 15606000 9799200 8680900 13245000 31325 2164 28583 263379;263380;263381;263382;263383;263384;263385;263386;263387;263388;263389;263390 209155;209156;209157;209158;209159;209160;209161;209162;209163;209164;209165;209166 209164 12 LNQTIASLK Unmodified 986.57605 0.57604528 4280 Q9C037 TRIM4 E3 ubiquitin-protein ligase TRIM4 yes yes 0 0 0 By MS/MS 3 0 1 1 56.098 51.231 2 0.035466 63004 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 63.48 1.4803 15387000 0 15387000 0 0 0 0 0 0 0 0 0 0 0 0 0 31326 4280 28584 263391 209167 209167 1 LNQVCATHQHFESR Unmodified 1725.8005 0.80053569 367 O43795 MYO1B Unconventional myosin-Ib yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 2 2 2 2 2 2 2 1 2 1 1 24.1 24.272 3;4 0.00035344 25908 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 67.115 56.071 131380000 0 0 0 2557700 13357000 9209100 9521900 17469000 9570800 9021100 22175000 4776900 18928000 7437400 7358900 31327 367 28585 263392;263393;263394;263395;263396;263397;263398;263399;263400;263401;263402;263403;263404;263405;263406;263407;263408;263409;263410;263411 209168;209169;209170;209171;209172;209173;209174;209175;209176;209177 209169 10 LNQVCFDDDGTSSPQDR Unmodified 1952.817 0.8170332 3311 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.455 48.616 2 5.9992E-37 54685 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 159.64 153.67 138810000 0 0 0 7324500 5767100 11750000 8978300 9970600 7184000 18218000 12367000 19372000 13168000 10255000 14459000 31328 3311 28586 263412;263413;263414;263415;263416;263417;263418;263419;263420;263421;263422;263423 209178;209179;209180;209181;209182;209183;209184;209185;209186;209187;209188;209189 209183 12 LNQVCFDDDGTSSPQDRLTLSQFQK Unmodified 2898.3454 0.3454 3311 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 77.73 77.912 3 3.2184E-96 89572 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 148.04 128.14 29102000 0 0 0 0 0 0 0 0 0 10349000 0 0 0 0 18753000 31329 3311 28587 263424;263425;263426 209190;209191;209192 209191 3 LNQVIFPVSYNDK Unmodified 1535.7984 0.79839365 4310 Q9GZZ1 NAA50 N-alpha-acetyltransferase 50 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 78.152 78.181 2 2.0416E-25 90282 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 195.27 177.4 2562400000 0 0 0 114280000 237990000 214280000 153930000 135710000 173510000 368330000 347420000 816990000 0 0 0 31330 4310 28588 263427;263428;263429;263430;263431;263432;263433;263434;263435 209193;209194;209195;209196;209197;209198;209199;209200;209201 209199 9 LNQVLVDIR Unmodified 1068.6291 0.62914348 4577 Q9NQW6 ANLN Actin-binding protein anillin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.927 67.01 2 0.0052791 76664 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 78.149 46.215 63361000 0 0 0 3110500 4383200 4961100 4733700 3822300 3115300 5912000 5965700 7553500 4338800 4978400 10487000 31331 4577 28589 263436;263437;263438;263439;263440;263441;263442;263443;263444;263445;263446;263447 209202;209203;209204;209205;209206;209207;209208;209209;209210 209206 7 LNQWCNVVR Unmodified 1187.587 0.58696109 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 52.672 52.979 2 0.0030679 60493 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 91.9 71.341 209000000 0 0 0 0 0 11183000 8034300 13486000 13763000 0 44417000 31633000 0 31803000 54678000 31332 848 28590 263448;263449;263450;263451;263452;263453;263454;263455 209211;209212;209213;209214;209215;209216 209211 5 LNQYFQK Unmodified 939.48142 0.48141661 2152 Q08211 DHX9 ATP-dependent RNA helicase A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.234 32.42 2 0.022704 34932 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 104.25 25.254 146020000 0 0 0 12556000 8348300 10070000 7933100 10656000 6245600 11253000 16599000 16276000 15586000 10078000 20414000 31333 2152 28591 263456;263457;263458;263459;263460;263461;263462;263463;263464;263465;263466;263467 209217;209218;209219;209220;209221;209222;209223;209224;209225;209226;209227 209225 10 LNRYNYIEGTK Unmodified 1369.699 0.69901396 3910 Q96KP4 CNDP2 Cytosolic non-specific dipeptidase yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 33.819 34.548 3 0.025575 36944 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.424 18.584 40489000 0 0 0 0 0 0 0 0 0 0 0 13616000 0 0 26873000 31334 3910 28592 263468;263469 209228 209228 0 LNSEASPSR Unmodified 959.46722 0.46722311 2234 Q13111 CHAF1A Chromatin assembly factor 1 subunit A yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 16 1 1 1 2 2 2 1 1 1 1 2 1 7.7094 7.8419 2 0.0084462 6301 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 69.598 31.953 44092000 0 0 0 1450500 1629600 1448700 2868700 3479500 3602800 2244800 6099400 5183800 2638400 8266100 5179500 31335 2234 28593 263470;263471;263472;263473;263474;263475;263476;263477;263478;263479;263480;263481;263482;263483;263484;263485 209229;209230;209231;209232;209233 209233 5 LNSELQQQLK Unmodified 1199.651 0.65100113 3791;3448 Q96D71;Q8NFH8 REPS1;REPS2 RalBP1-associated Eps domain-containing protein 1;RalBP1-associated Eps domain-containing protein 2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.987 42.164 2 0.005088 47672 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 88.294 54.041 91661000 0 0 0 6466700 3421000 9024800 6375700 6665900 5033700 11161000 9021800 9553900 7217400 5936500 11782000 31336 3791;3448 28594 263486;263487;263488;263489;263490;263491;263492;263493;263494;263495;263496;263497 209234;209235;209236;209237;209238;209239 209239 6 LNSELWKPESFRK Unmodified 1632.8624 0.86239089 5193 Q9Y4C1 KDM3A Lysine-specific demethylase 3A yes yes 0 0 2 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 57.885 58.279 4 0.031752 65466 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 34 27.523 26123000 0 0 0 0 0 7766700 0 0 0 0 3618600 3888700 0 0 10849000 31337 5193 28595 263498;263499;263500;263501 209240 209240 1 LNSEQSQALQHQQETGR Unmodified 1952.93 0.93002954 3666 Q92817 EVPL Envoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching 10 0 7 1 1 1 1 1 1 1 22.984 23.17 3 3.1725E-41 24482 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 146.3 130.18 30585000 0 0 0 13949000 0 0 2488900 4097200 925240 1932900 0 0 3229500 0 3962900 31338 3666 28596 263502;263503;263504;263505;263506;263507;263508 209241;209242;209243 209243 3 LNSEYSMAETLVGTPYYMSPELCQGVK Unmodified 3066.4024 0.40244587 3496 Q8TD19 NEK9 Serine/threonine-protein kinase Nek9 yes yes 0 0 0 By MS/MS 2 0 1 1 96.195 91.374 3 4.6333E-07 113124 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 51.956 45.981 21704000 0 21704000 0 0 0 0 0 0 0 0 0 0 0 0 0 31339 3496 28597 263509 209244;209245 209244 2 LNSGGGLSEELGSAR Unmodified 1445.711 0.71103521 3912 Q96KQ7 EHMT2 Histone-lysine N-methyltransferase EHMT2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 50.997 51.126 2 8.2751E-24 58438 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 139.46 94.382 141980000 0 0 0 11983000 11091000 13541000 14232000 0 0 0 18496000 24703000 0 17732000 30202000 31340 3912 28598 263510;263511;263512;263513;263514;263515;263516;263517;263518 209246;209247;209248;209249;209250;209251;209252;209253;209254 209254 9 LNSGGGLSEELGSARR Unmodified 1601.8121 0.81214624 3912 Q96KQ7 EHMT2 Histone-lysine N-methyltransferase EHMT2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 43.972 44.474 3 0.00010097 49306 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 52.823 39.705 55258000 0 0 0 0 0 0 0 10193000 0 0 0 15042000 13226000 0 16798000 31341 3912 28599 263519;263520;263521;263522;263523 209255;209256;209257;209258;209259;209260;209261;209262 209260 8 LNSGLGQLILK Unmodified 1154.7023 0.70230842 196 O14639 ABLIM1 Actin-binding LIM protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 79.659 79.008 2 0.0037353 91029 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.184 36.8 38928000 6194700 0 0 0 2495900 1912300 2222100 2190200 0 3340300 2725900 5559300 2555800 3267800 6463300 31342 196 28600 263524;263525;263526;263527;263528;263529;263530;263531;263532;263533;263534 209263;209264;209265;209266;209267 209264 5 LNSGMVSNMEGTAGGERPSVVNGDSGK Unmodified 2649.2123 0.21227733 3408 Q8NCE0 TSEN2 tRNA-splicing endonuclease subunit Sen2 yes yes 0 0 1 By MS/MS 2 0 1 1 61.599 57.829 3 0.013844 71937 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 24.459 21.658 1796900 0 0 1796900 0 0 0 0 0 0 0 0 0 0 0 0 31343 3408 28601 263535 209268 209268 1 LNSGVDYR Unmodified 922.45084 0.45084476 1892 P62312 LSM6 U6 snRNA-associated Sm-like protein LSm6 yes yes 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 22.725 22.89 2 0.013883 23414 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 71.379 26.658 70626000 0 0 0 4274900 3771900 5294200 4093400 6641500 2419200 5670700 11633000 10439000 7029600 9359000 0 31344 1892 28602 263536;263537;263538;263539;263540;263541;263542;263543;263544;263545;263546 209269;209270;209271 209270 3 LNSHETTITQQSVSDSHLAELQEK Unmodified 2694.3097 0.30966642 2817 Q5VU43 PDE4DIP Myomegalin yes yes 0 0 0 By MS/MS 2 0 1 1 61.733 57.962 3 0.047128 72162 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 15.128 8.1756 2488600 0 0 2488600 0 0 0 0 0 0 0 0 0 0 0 0 31345 2817 28603 263547 209272 209272 1 LNSKPPNIGFK Unmodified 1213.6819 0.68190733 5092 Q9Y295 DRG1 Developmentally-regulated GTP-binding protein 1 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.79 45.959 3 0.0075279 51528 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 48.785 33.196 171360000 0 0 0 8777700 7737600 14121000 11255000 10333000 9851300 14040000 22370000 14587000 16381000 12793000 29110000 31346 5092 28604 263548;263549;263550;263551;263552;263553;263554;263555;263556;263557;263558;263559 209273 209273 1 LNSLAIGLR Unmodified 955.58147 0.581465 1749 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 66.342 66.42 2 0.0046657 75194 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.095 45.522 45238000 0 0 0 3853600 2441000 3957800 4466100 3289900 0 4270200 4068000 4976100 4631400 4078000 5205700 31347 1749 28605 263560;263561;263562;263563;263564;263565;263566;263567;263568;263569;263570 209274;209275;209276;209277;209278;209279;209280;209281;209282;209283;209284;209285 209277 12 LNSLMSLVNK Oxidation (M) 1133.6114 0.6114445 130 O00232 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.46 3.15 5 21 2 2 1 2 2 2 2 2 2 2 1 2 2 2 60.419 59.251 2 7.0723E-06 67612 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 146.69 95.99 410050000 53445000 55421000 4010100 24278000 30140000 24664000 15627000 12121000 0 47133000 51973000 36851000 15583000 15023000 23785000 31348 130 28606 263571;263572;263573;263574;263575;263576;263577;263578;263579;263580;263581;263582;263583;263584;263585;263586;263587;263588;263589;263590;263591;263592;263593;263594;263595;263596 209286;209287;209288;209289;209290;209291;209292;209293;209294;209295;209296;209297;209298;209299;209300;209301;209302;209303;209304;209305;209306;209307;209308;209309;209310 209289 177 23 LNSLMSLVNK Unmodified 1117.6165 0.61652988 130 O00232 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77.471 76.409 2 0.00015267 95947 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.86 75.417 470430000 111050000 96837000 5181600 10672000 17331000 17158000 0 15792000 6217700 34685000 44429000 50009000 7971200 13080000 40014000 31349 130 28606 263597;263598;263599;263600;263601;263602;263603;263604;263605;263606;263607;263608;263609;263610;263611 209311;209312;209313;209314;209315;209316;209317;209318;209319;209320;209321;209322;209323;209324;209325;209326 209314 16 LNSLPSEYESGSACPAQTVHYRPINLSSSENK Unmodified 3534.6685 0.66852505 4489 Q9HAU0 PLEKHA5 Pleckstrin homology domain-containing family A member 5 yes yes 0 0 1 By MS/MS 2 0 1 1 77.76 69.629 4 1.2858E-09 91712 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.422 44.551 5993400 5993400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31350 4489 28607 263612 209327 209327 1 LNSNDEDIHTANER Unmodified 1626.7234 0.72339081 783 P04424 ASL Argininosuccinate lyase yes yes 0 0 0 By MS/MS 3 0 1 1 21.906 18.017 3 0.01452 22504 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 34.432 28.889 2511700 0 2511700 0 0 0 0 0 0 0 0 0 0 0 0 0 31351 783 28608 263613 209328 209328 1 LNSNEARLK Unmodified 1043.5724 0.57235688 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 17.197 13.747 2 2.5269E-05 19670 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 171.99 76.635 980220000 645070000 149750000 185390000 0 0 0 0 0 0 0 0 0 0 0 0 31352 1986 28609 263614;263615;263616;263617 209329;209330;209331;209332;209333;209334;209335 209331 7 LNSNLDAK Unmodified 873.4556 0.45559579 3666 Q92817 EVPL Envoplakin yes yes 0 0 0 By MS/MS 10 0 1 1 15.545 15.41 2 0.033237 15158 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 53.833 0.73493 2437700 0 0 0 2437700 0 0 0 0 0 0 0 0 0 0 0 31353 3666 28610 263618 209336 209336 1 LNSNTQVVLLSATMPSDVLEVTK Unmodified 2458.2989 0.29889072 1816 P60842 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.89 3.63 4 2 3 2 3 1 1 1 1 95.552 92.609 2;3 2.3933E-131 114520 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 151.94 135.85 1791400000 107370000 1672200000 3879000 0 0 0 0 0 0 2478000 1866700 0 0 0 3656300 31354 1816 28611 263619;263620;263621;263622;263623;263624;263625;263626;263627 209337;209338;209339;209340;209341;209342;209343;209344;209345 209338 9 LNSNTQVVLLSATMPSDVLEVTK Oxidation (M) 2474.2938 0.29380534 1816 P60842 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 4.5 3.61 6 1 3 1 4 2 1 1 1 90.94 87.884 2;3 9.79E-81 109738 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 141.86 123.94 1204800000 28373000 1140000000 19910000 0 0 0 0 0 0 6767800 3483600 0 0 0 6274700 31355 1816 28611 263628;263629;263630;263631;263632;263633;263634;263635;263636;263637 209346;209347;209348;209349;209350;209351;209352;209353;209354;209355 209350 2952 9 LNSSDPSLIGLK Unmodified 1242.682 0.68196691 4902 Q9UHI6 DDX20 Probable ATP-dependent RNA helicase DDX20 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.655 64.744 2 0.00025852 73198 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.006 52.735 119350000 0 0 0 5159300 6939800 10218000 7909300 8267500 5397400 10866000 11626000 16747000 11239000 9687300 15298000 31356 4902 28612 263638;263639;263640;263641;263642;263643;263644;263645;263646;263647;263648;263649 209356;209357;209358;209359;209360;209361;209362;209363;209364;209365;209366 209359 11 LNSSIVEPK Unmodified 985.54441 0.5444108 2042 Q00653 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 36.475 35.371 2 0.0031256 39759 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 91.069 60.065 391890000 6341400 184810000 3122600 9439500 11451000 18947000 12125000 11104000 11780000 21015000 15803000 18750000 17757000 18521000 30929000 31357 2042 28613 263650;263651;263652;263653;263654;263655;263656;263657;263658;263659;263660;263661;263662;263663;263664;263665 209367;209368;209369;209370;209371;209372;209373;209374;209375;209376;209377;209378;209379;209380;209381;209382 209382 16 LNSSNSASPHR Unmodified 1168.5585 0.55849773 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching 10 0 5 1 1 1 1 1 5.8944 6.1073 3 0.042598 3697 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 44.299 29.149 10491000 0 0 0 0 0 0 3139100 0 1492800 0 1672200 0 0 1493700 2692800 31358 1601 28614 263666;263667;263668;263669;263670 209383 209383 0 LNSSSSSSSNSSNEREDFDSTSSSSSTPPLQPR Unmodified 3460.5098 0.50983538 2332 Q13620 CUL4B Cullin-4B yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 47.697 47.802 3 4.0071E-43 53704 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 73.126 62.61 56812000 0 0 0 3598900 2546000 7619500 4063300 0 4451900 8821900 6415700 6507100 7126400 5661400 0 31359 2332 28615 263671;263672;263673;263674;263675;263676;263677;263678;263679;263680 209384;209385;209386;209387;209388;209389 209385 6 LNSSTEANVIK Unmodified 1174.6194 0.61936665 3463 Q8NI08 NCOA7 Nuclear receptor coactivator 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 29.428 29.933 3 0.024151 31334 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.496 13.167 145300000 0 0 0 0 0 0 0 0 0 31920000 23327000 29048000 0 0 61004000 31360 3463 28616 263681;263682;263683;263684 209390;209391 209391 0 LNSVDPTMSIDLK Oxidation (M) 1447.7228 0.72284545 3241 Q8IWI9 MGA MAX gene-associated protein yes yes 0 1 0 By MS/MS 2 0 1 1 69.039 63.139 2 0.019729 80578 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 55.806 36.828 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31361 3241 28617 263685 209392 209392 4855 1 LNSVQSSER Unmodified 1018.5043 0.5043369 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 9.0455 9.3432 2 0.0077155 7110 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.692 23.409 2626000 0 0 0 0 0 0 0 0 0 0 0 0 0 1006300 1619800 31362 1565 28618 263686;263687 209393 209393 1 LNSVQVLER Unmodified 1056.5928 0.59275797 3990 Q96SI1 KCTD15 BTB/POZ domain-containing protein KCTD15 yes yes 0 0 0 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 48.12 48.338 2 0.0092024 53317 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.414 26.532 23211000 0 0 0 0 3053000 0 0 0 0 0 6463800 0 0 6255200 7439400 31363 3990 28619 263688;263689;263690;263691 209394 209394 1 LNSVTDPTGFLR Unmodified 1318.6881 0.68811492 3745 Q96AY4 TTC28 Tetratricopeptide repeat protein 28 yes yes 0 0 0 By MS/MS 10 0 1 1 75.713 75.803 2 0.0086611 87710 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 59.426 22.082 8712600 0 0 0 0 0 0 0 0 0 0 0 0 8712600 0 0 31364 3745 28620 263692 209395 209395 1 LNSYIQGK Unmodified 921.49198 0.4919813 5256 Q9Y5Z4 HEBP2 Heme-binding protein 2 yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 29.765 24.732 2 0.012115 32461 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.41 12.27 110740000 18767000 91972000 0 0 0 0 0 0 0 0 0 0 0 0 0 31365 5256 28621 263693;263694 209396 209396 1 LNSYIQGKNEK Unmodified 1292.6725 0.67246486 5256 Q9Y5Z4 HEBP2 Heme-binding protein 2 yes yes 0 0 1 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 23.3 23.586 3 0.041817 23685 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 25.474 0.62065 13987000 0 0 0 1710800 0 1105400 0 0 0 0 0 4851700 0 0 6319300 31366 5256 28622 263695;263696;263697;263698 209397 209397 1 LNSYYGNVPVIEVK Unmodified 1593.8403 0.84025847 3056 Q7L7V1 DHX32 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 78.968 78.445 2 0.00065586 90724 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 79.82 66.467 111860000 0 59783000 685930 0 2119800 4259500 2758200 0 2761400 6048800 5936700 6620400 4829700 5636500 10424000 31367 3056 28623 263699;263700;263701;263702;263703;263704;263705;263706;263707;263708;263709;263710 209398;209399;209400;209401;209402;209403;209404;209405 209398 8 LNTAASTEDVK Unmodified 1147.5721 0.57208211 2898 Q6NUN9 ZNF746 Zinc finger protein 746 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 20.889 21.221 2 0.0051771 20879 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 75.378 42.538 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31368 2898 28624 263711;263712 209406;209407 209406 2 LNTAEDAK Unmodified 860.42396 0.42396131 1495 P46060 RANGAP1 Ran GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching By matching 10 0 7 1 1 1 1 1 1 1 6.6414 6.7202 2 0.038354 4745 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 51.059 18.946 13558000 0 0 0 0 1923700 969420 3469800 4246100 630840 0 0 1005800 1312200 0 0 31369 1495 28625 263713;263714;263715;263716;263717;263718;263719 209408;209409 209408 2 LNTDPMLLQFFK Oxidation (M) 1481.7588 0.75883702 3702 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 2 1 2 1 2 2 90.591 90.713 2 0.00031557 104976 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.148 64.21 40792000 0 0 0 0 905010 1718900 959430 1014400 3138400 3912700 5744100 0 744910 3180000 19474000 31370 3702 28626 263720;263721;263722;263723;263724;263725;263726;263727;263728;263729;263730;263731;263732;263733 209410;209411;209412 209411 5279 3 LNTEETVK Unmodified 932.48148 0.48147619 1453 P42338 PIK3CB Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform yes yes 0 0 0 By MS/MS 2 0 1 1 17.641 14.221 2 0.017458 18669 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.37 29.398 13164000 0 13164000 0 0 0 0 0 0 0 0 0 0 0 0 0 31371 1453 28627 263734 209413 209413 1 LNTEEYLRVIGK Unmodified 1433.7878 0.78782897 1636 P50748 KNTC1 Kinetochore-associated protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 80.81 72.68 3 0.0078962 95333 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.802 36.043 42836000 42836000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31372 1636 28628 263735 209414 209414 1 LNTETFGVSGR Unmodified 1179.5884 0.58840088 4218 Q9BX40 LSM14B Protein LSM14 homolog B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 47.754 47.957 2 0.00057092 53869 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 80.896 41.597 149400000 0 0 0 14462000 0 13442000 14509000 8665200 14173000 16837000 0 21269000 10169000 13210000 22660000 31373 4218 28629 263736;263737;263738;263739;263740;263741;263742;263743;263744;263745;263746 209415;209416;209417;209418;209419;209420;209421;209422 209416 8 LNTIIIK Unmodified 813.53239 0.53238955 4955 Q9UK61 FAM208A Protein FAM208A yes yes 0 0 0 By MS/MS 2 0 1 1 63.194 54.925 2 0.031063 74088 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.777 27.47 11569000 11569000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31374 4955 28630 263747 209423 209423 1 LNTITPVVGK Unmodified 1040.623 0.62299547 4517 Q9HCK8 CHD8 Chromodomain-helicase-DNA-binding protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 51.64 50.119 2 0.0019733 55502 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 97.635 60.077 147140000 5754100 50263000 0 12491000 7116900 0 15353000 10933000 0 0 0 0 15902000 11545000 17781000 31375 4517 28631 263748;263749;263750;263751;263752;263753;263754;263755;263756 209424;209425;209426;209427;209428;209429;209430 209426 7 LNTLLQR Unmodified 856.51305 0.51305109 2046 Q00839 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 2 1 1 1 2 1 1 1 1 1 1 1 40.954 41.083 2 1.2421E-34 44446 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 189.97 94.012 10672000000 0 0 0 615930000 786150000 811070000 700380000 610170000 617140000 1052200000 1045200000 1233500000 1190100000 932000000 1078200000 31376 2046 28632 263757;263758;263759;263760;263761;263762;263763;263764;263765;263766;263767;263768;263769;263770 209431;209432;209433;209434;209435;209436;209437;209438;209439;209440;209441;209442;209443 209434 13 LNTLLQRAPQCLGK Unmodified 1610.8926 0.89264516 2046 Q00839 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 0 0 1 By MS/MS 2 0 1 1 70.929 62.663 3 0.0029916 83370 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 59.607 48.82 12289000 12289000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31377 2046 28633 263771 209444 209444 1 LNTLLQTK Unmodified 929.55458 0.55458155 3009 Q6ZS30 NBEAL1 Neurobeachin-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 49.178 42.403 2 0.026577 55580 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.46 70.741 36521000 17336000 19185000 0 0 0 0 0 0 0 0 0 0 0 0 0 31378 3009 28634 263772;263773 209445 209445 0 LNTQEIFDDWARK Unmodified 1634.8053 0.80526994 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.57 3.85 3 1 3 1 2 1 1 1 1 83.697 81.121 3 1.2215E-05 103334 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 99.844 79.061 89326000 24128000 44059000 855020 0 0 0 0 3699200 4087800 0 0 0 0 0 12498000 31379 2392 28635 263774;263775;263776;263777;263778;263779;263780 209446;209447;209448;209449;209450 209450 5 LNTSDFQK Unmodified 951.46616 0.46616048 3750 Q96B36 AKT1S1 Proline-rich AKT1 substrate 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.45 29.642 2 0.0063839 31887 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 101.33 46.802 447280000 0 0 0 21429000 18199000 17470000 35535000 24931000 21686000 35431000 53437000 48863000 47557000 46379000 76363000 31380 3750 28636 263781;263782;263783;263784;263785;263786;263787;263788;263789;263790;263791;263792 209451;209452;209453;209454;209455;209456;209457;209458;209459;209460;209461;209462 209459 11 LNTSEVGHK Unmodified 983.50361 0.50360861 5023 Q9UMZ2 SYNRG Synergin gamma yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 9.5577 9.8554 2 0.020296 7597 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 83.206 52.488 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31381 5023 28637 263793;263794 209463;209464 209464 2 LNTSVDTHK Unmodified 1013.5142 0.5141733 2561 Q15652 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C yes yes 0 0 0 By MS/MS 2 0 1 1 13.543 10.229 2 0.0055428 13771 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.74 77.453 7462100 0 7462100 0 0 0 0 0 0 0 0 0 0 0 0 0 31382 2561 28638 263795 209465 209465 1 LNTYIGFSEILDMEPYVEHK Unmodified 2397.1562 0.15624923 3157 Q86UV5 USP48 Ubiquitin carboxyl-terminal hydrolase 48 yes yes 0 0 0 By MS/MS 2 0 1 1 98.48 90.35 3 6.307E-05 116592 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 44.788 37.835 13889000 13889000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31383 3157 28639 263796 209466 209466 1 LNVAEVTQSEIAQK Unmodified 1528.8097 0.80968662 4665 Q9NVD7 PARVA Alpha-parvin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 4 24 1 2 1 2 2 2 2 2 2 2 2 2 2 2 2 67.505 66.747 2;3 9.5053E-46 84405 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 223.87 180.1 1347300000 6858200 914180000 4361100 20597000 19757000 43031000 29933000 23994000 19331000 52640000 43611000 43060000 29702000 30729000 65504000 31384 4665 28640 263797;263798;263799;263800;263801;263802;263803;263804;263805;263806;263807;263808;263809;263810;263811;263812;263813;263814;263815;263816;263817;263818;263819;263820;263821;263822;263823;263824 209467;209468;209469;209470;209471;209472;209473;209474;209475;209476;209477;209478;209479;209480;209481;209482;209483;209484;209485;209486;209487;209488;209489;209490 209471 22 LNVAYFR Unmodified 881.47594 0.4759373 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 60.623 60.82 2 0.016413 69552 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 116 95.65 76857000 0 0 0 0 5700600 0 6164300 10542000 0 8753800 8921800 9558700 7683500 7631100 11902000 31385 5189 28641 263825;263826;263827;263828;263829;263830;263831;263832;263833 209491;209492;209493;209494;209495;209496;209497;209498;209499 209497 9 LNVCVSK Unmodified 818.43202 0.43202358 1008;3567 P14866;Q8WVV9 HNRNPL;HNRNPLL Heterogeneous nuclear ribonucleoprotein L;Heterogeneous nuclear ribonucleoprotein L-like no no 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 28.141 28.411 2 0.04998 29481 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 63.21 17.76 171540000 0 0 0 7608100 0 11539000 0 13289000 12370000 11870000 22038000 24980000 17987000 18639000 31221000 31386 1008;3567 28642 263834;263835;263836;263837;263838;263839;263840;263841;263842;263843 209500 209500 1 LNVEAVNTHR Unmodified 1151.6047 0.60471964 433 O60825 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 1 2 2 1 2 2 2 2 2 2 29.645 29.848 2;3 0.00011837 31032 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 142.92 119.49 1426200000 0 0 0 113810000 122180000 107990000 129150000 107510000 85148000 124660000 116110000 143620000 135330000 79197000 161460000 31387 433 28643 263844;263845;263846;263847;263848;263849;263850;263851;263852;263853;263854;263855;263856;263857;263858;263859;263860;263861;263862;263863;263864;263865 209501;209502;209503;209504;209505;209506;209507;209508;209509;209510;209511;209512;209513;209514;209515;209516;209517;209518;209519;209520;209521;209522 209506 8 LNVEAVNTHRDK Unmodified 1394.7266 0.72662569 433 O60825 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 23.45 23.414 3 0.01344 24511 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 40.725 22.916 20314000 0 0 0 2113600 2081600 6481100 1941300 0 4041200 3655300 0 0 0 0 0 31388 433 28644 263866;263867;263868;263869;263870;263871 209523 209523 1 LNVGAPDVTLR Unmodified 1153.6455 0.64552182 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.451 66.536 2 0.0010169 76303 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 75.652 41.4 157800000 0 0 0 10662000 7762100 9743800 9159800 13975000 8947400 11727000 14541000 18056000 14616000 16406000 22201000 31389 2172 28645 263872;263873;263874;263875;263876;263877;263878;263879;263880;263881;263882;263883 209524;209525;209526;209527;209528;209529;209530;209531;209532 209529 8 LNVHMNPPQVK Unmodified 1275.6758 0.6757761 1669;1450 P42229;P51692 STAT5A;STAT5B Signal transducer and activator of transcription 5A;Signal transducer and activator of transcription 5B no no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 5.43 3.96 4 3 2 1 1 1 1 1 52.96 49.469 2;3 0.00045206 67918 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.57 74.312 132700000 70205000 24996000 10105000 0 0 0 0 0 0 0 0 6094100 0 4782800 16515000 31390 1450;1669 28646 263884;263885;263886;263887;263888;263889;263890 209533;209534;209535;209536 209534 4 LNVHMNPPQVK Oxidation (M) 1291.6707 0.67069072 1669;1450 P42229;P51692 STAT5A;STAT5B Signal transducer and activator of transcription 5A;Signal transducer and activator of transcription 5B no no 0 1 0 By MS/MS By MS/MS 2 0 4 2 2 35.596 30.711 3 0.0032465 43009 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.624 42.847 84478000 60084000 0 24394000 0 0 0 0 0 0 0 0 0 0 0 0 31391 1450;1669 28646 263891;263892;263893;263894 209537;209538 209538 2285 2 LNVIDDDVEEIK Unmodified 1400.7035 0.70349021 554 O75886 STAM2 Signal transducing adapter molecule 2 yes yes 0 0 0 By MS/MS 2 0 1 1 76.108 67.977 2 0.012511 89652 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.962 48.447 6182100 6182100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31392 554 28647 263895 209539 209539 1 LNVIDDDVEEIKK Unmodified 1528.7985 0.79845323 554 O75886 STAM2 Signal transducing adapter molecule 2 yes yes 0 0 1 By MS/MS 3 0 1 1 65.727 61 3 0.0093398 74728 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 50.675 38.51 5427800 0 5427800 0 0 0 0 0 0 0 0 0 0 0 0 0 31393 554 28648 263896 209540 209540 1 LNVITVGPR Unmodified 967.58147 0.581465 768 P04040 CAT Catalase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 57.625 57.743 2 0.0040314 66464 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 98.458 64.908 443680000 0 0 0 77743000 21293000 20856000 26589000 77925000 21265000 32546000 30380000 59077000 33581000 21289000 21135000 31394 768 28649 263897;263898;263899;263900;263901;263902;263903;263904;263905;263906;263907;263908 209541;209542;209543;209544;209545;209546;209547;209548;209549;209550;209551 209551 11 LNVSHNK Unmodified 810.4348 0.43480077 4468 Q9H9A6 LRRC40 Leucine-rich repeat-containing protein 40 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 6.1723 3.442 2 0.024746 5293 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 131.3 45.411 457920000 0 202880000 255050000 0 0 0 0 0 0 0 0 0 0 0 0 31395 4468 28650 263909;263910 209552 209552 1 LNVSQDDVLYALK Unmodified 1476.7824 0.78240924 2282 Q13415 ORC1 Origin recognition complex subunit 1 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 81.35 81.395 2 0.012516 94256 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 42.001 15.487 6980300 0 0 0 0 0 3630100 0 0 0 0 0 0 3350200 0 0 31396 2282 28651 263911;263912 209553 209553 1 LNVSQQPLLDVEGNLIK Unmodified 1879.0415 0.041477469 1739 P54278 PMS2 Mismatch repair endonuclease PMS2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 88.805 88.219 2 4.9677E-75 109695 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 182.02 170.22 195780000 0 138380000 0 0 2281100 2881400 1743700 3025300 2463600 12161000 6279900 5725000 0 4663700 16165000 31397 1739 28652 263913;263914;263915;263916;263917;263918;263919;263920;263921;263922;263923;263924 209554;209555;209556;209557;209558;209559;209560;209561;209562;209563;209564;209565;209566 209556 13 LNVTDSVINK Unmodified 1101.603 0.60298831 4115 Q9BRS2 RIOK1 Serine/threonine-protein kinase RIO1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 49.394 49.569 2 0.0013138 55706 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 107.69 44.976 39238000 0 0 0 0 6232800 0 9093600 0 0 0 11005000 12906000 0 0 0 31398 4115 28653 263925;263926;263927;263928;263929;263930 209567;209568;209569;209570;209571;209572;209573 209569 6 LNVTEQEK Unmodified 959.49238 0.49237523 827 P06733 ENO1 Alpha-enolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.91 3.87 1 6 2 14 3 4 2 1 1 1 1 1 2 1 1 2 1 1 1 22.336 21.511 1;2 8.2467E-19 16911 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 176.29 89.425 17756000000 1986200000 11256000000 131960000 218750000 28713000 33459000 31155000 23983000 18370000 44035000 600160000 958070000 54883000 541180000 1828100000 31399 827 28654 263931;263932;263933;263934;263935;263936;263937;263938;263939;263940;263941;263942;263943;263944;263945;263946;263947;263948;263949;263950;263951;263952;263953 209574;209575;209576;209577;209578;209579;209580;209581;209582;209583;209584;209585;209586;209587;209588;209589;209590;209591;209592;209593;209594;209595;209596;209597;209598;209599;209600 209585 21 LNVWDLSK Unmodified 973.52328 0.52328142 2615;2169 Q09028;Q16576 RBBP4;RBBP7 Histone-binding protein RBBP4;Histone-binding protein RBBP7 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 74.156 74.285 2 0.0068047 84841 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.111 45.479 502610000 0 0 0 0 21094000 0 21404000 34034000 19378000 44509000 71170000 63308000 38611000 48864000 140240000 31400 2169;2615 28655 263954;263955;263956;263957;263958;263959;263960;263961;263962;263963;263964 209601;209602;209603;209604;209605;209606;209607;209608;209609;209610;209611 209604 11 LNWTGTSK Unmodified 905.46068 0.46068117 661 O95433 AHSA1 Activator of 90 kDa heat shock protein ATPase homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.91 3.42 2 1 8 1 2 1 1 1 1 1 1 1 1 33.858 32.491 2 0.0059797 34370 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 104.75 45.137 1047200000 523260000 361210000 0 0 0 24598000 0 9703000 0 27566000 0 17524000 12952000 20624000 49767000 31401 661 28656 263965;263966;263967;263968;263969;263970;263971;263972;263973;263974;263975 209612;209613;209614;209615;209616;209617;209618;209619;209620;209621;209622 209614 9 LNYAIFDEGHMLK Oxidation (M) 1565.7548 0.75481428 4402 Q9H4L7 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 yes yes 0 1 0 By MS/MS 2 0 1 1 79.567 71.437 3 0.005951 93823 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.704 37.434 19452000 19452000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31402 4402 28657 263976 209623 209623 5865 1 LNYEENK Unmodified 908.42396 0.42396131 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 13.563 13.775 2 0.025177 12442 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.297 33.448 112300000 0 0 0 11565000 0 14332000 0 8818700 10780000 12799000 13450000 10961000 14729000 0 14864000 31403 643 28658 263977;263978;263979;263980;263981;263982;263983;263984;263985 209624;209625 209625 2 LNYEENKEESLLEK Unmodified 1736.8469 0.84685999 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 0 1 By MS/MS By MS/MS 2.25 0.433 3 1 3 1 56.179 51.077 2;3 6.6003E-30 66135 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.24 120.95 140730000 0 124460000 16266000 0 0 0 0 0 0 0 0 0 0 0 0 31404 643 28659 263986;263987;263988;263989 209626;209627;209628;209629;209630 209627 5 LNYEGLPIGK Unmodified 1102.6023 0.60226003 2814 Q5VTE6 ANGEL2 Protein angel homolog 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 70.071 69.044 2 0.013776 79036 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 51.066 20.9 62386000 0 40018000 0 1529500 2631000 2557700 2333000 2826300 0 0 5766500 4723800 0 0 0 31405 2814 28660 263990;263991;263992;263993;263994;263995;263996;263997;263998;263999 209631;209632;209633;209634;209635;209636;209637 209636 7 LNYGIPAIVK Unmodified 1086.6437 0.64373091 1010 P14923 JUP Junction plakoglobin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.588 77.646 2 0.0098476 89532 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 57.047 40.271 1108500000 0 0 0 241910000 56566000 59670000 50142000 269440000 40838000 70041000 64234000 83546000 87307000 42000000 42840000 31406 1010 28661 264000;264001;264002;264003;264004;264005;264006;264007;264008;264009;264010;264011 209638;209639;209640;209641;209642;209643;209644;209645;209646;209647 209639 4 LNYSDHDVIK Unmodified 1202.5932 0.5931519 3786 Q96CW1 AP2M1 AP-2 complex subunit mu yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.33 3.77 3 6 1 1 1 1 1 1 1 1 1 38.125 36.695 2;3 0.0019286 39366 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 101.97 65.133 496160000 15697000 350820000 51505000 0 0 0 0 0 6458000 9579700 9045900 18660000 16649000 0 17746000 31407 3786 28662 264012;264013;264014;264015;264016;264017;264018;264019;264020 209648;209649;209650;209651 209649 4 LNYVPLEK Unmodified 974.54368 0.54368251 3041 Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 55.451 54.131 2 0.0035079 68990 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.29 75.476 1806400000 12173000 478950000 7968400 71069000 85998000 76568000 116230000 115790000 78552000 134920000 126290000 138220000 108770000 106420000 148420000 31408 3041 28663 264021;264022;264023;264024;264025;264026;264027;264028;264029;264030;264031;264032;264033;264034;264035;264036 209652;209653;209654;209655;209656;209657;209658;209659;209660;209661;209662;209663;209664;209665;209666;209667;209668;209669 209655 18 LPAAGVGDMVMATVK Oxidation (M) 1474.7524 0.75237144 1913 P62829 RPL23 60S ribosomal protein L23 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 27 3 2 2 2 3 2 2 2 2 2 2 3 72.323 72.371 2 6.4705E-27 80414 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 127.56 118.98 355740000 0 0 0 15225000 20227000 34599000 19086000 35381000 20679000 34964000 36297000 40265000 21387000 28486000 49148000 31409 1913 28664 264037;264038;264039;264040;264041;264042;264043;264044;264045;264046;264047;264048;264049;264050;264051;264052;264053;264054;264055;264056;264057;264058;264059;264060;264061;264062;264063 209670;209671;209672;209673;209674;209675;209676;209677;209678;209679;209680;209681;209682;209683;209684;209685;209686;209687;209688;209689;209690;209691;209692;209693;209694;209695;209696;209697 209688 3090;3091 25 LPAAGVGDMVMATVK Unmodified 1458.7575 0.75745681 1913 P62829 RPL23 60S ribosomal protein L23 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 2 2 2 1 1 2 2 2 1 2 2 81.83 81.902 2;3 2.0802E-27 93877 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 136.53 126.88 213150000 0 0 0 2502200 8893600 15592000 6742300 17820000 7820700 27142000 21671000 24442000 5864200 17034000 57629000 31410 1913 28664 264064;264065;264066;264067;264068;264069;264070;264071;264072;264073;264074;264075;264076;264077;264078;264079;264080;264081;264082;264083 209698;209699;209700;209701;209702;209703;209704;209705;209706;209707;209708;209709;209710 209706 12 LPAAGVGDMVMATVK 2 Oxidation (M) 1490.7473 0.74728606 1913 P62829 RPL23 60S ribosomal protein L23 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 55.494 55.624 2 2.272E-07 62780 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 86.114 67.508 384210000 0 0 0 18531000 27546000 0 37709000 30310000 30694000 0 51342000 64325000 31443000 34249000 58059000 31411 1913 28664 264084;264085;264086;264087;264088;264089;264090;264091;264092;264093 209711;209712;209713;209714;209715;209716;209717;209718;209719;209720;209721 209711 3090;3091 11 LPAATLALEEDLK Unmodified 1382.7657 0.76569654 1125 P21359 NF1 Neurofibromin;Neurofibromin truncated yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 86.124 82.503 2 6.5654E-10 102452 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 141.08 113.97 43691000 0 39671000 4020000 0 0 0 0 0 0 0 0 0 0 0 0 31412 1125 28665 264094;264095 209722;209723 209722 2 LPAEEFK Unmodified 832.43307 0.43306943 4000 Q96T60 PNKP Bifunctional polynucleotide phosphatase/kinase;Polynucleotide 3'-phosphatase;Polynucleotide 5'-hydroxyl-kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 31.989 31.157 2 0.030335 32786 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 74.832 12.835 214600000 0 101300000 1657400 22277000 8816700 22906000 8326400 7635500 21881000 0 0 0 9977700 9827700 0 31413 4000 28666 264096;264097;264098;264099;264100;264101;264102;264103;264104;264105 209724;209725 209724 2 LPAEGPEPEADSQEQVHPK Unmodified 2056.9702 0.97016302 502 O75459 PAGE1 P antigen family member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.21 3.66 4 3 12 1 5 1 1 1 1 1 1 1 1 1 1 1 1 1 39.671 37.887 2;3 4.0841E-125 42361 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 195.78 176.49 1672800000 72515000 1076400000 17667000 0 22554000 17918000 26887000 26841000 19419000 30053000 85729000 70941000 45152000 35065000 125620000 31414 502 28667 264106;264107;264108;264109;264110;264111;264112;264113;264114;264115;264116;264117;264118;264119;264120;264121;264122;264123;264124 209726;209727;209728;209729;209730;209731;209732;209733;209734;209735;209736;209737;209738;209739;209740;209741;209742;209743;209744;209745;209746;209747;209748 209741 23 LPAELEPEPSGEPK Unmodified 1491.7457 0.74568938 2972 Q6UB99 ANKRD11 Ankyrin repeat domain-containing protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 54.589 54.787 2 0.0019529 62104 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 71.03 49.345 25385000 0 0 0 0 3238700 0 5880400 0 3578400 0 0 7500800 0 0 5186900 31415 2972 28668 264125;264126;264127;264128;264129 209749;209750 209749 2 LPAELGPQLLHK Unmodified 1314.766 0.76597131 4712 Q9NX08 COMMD8 COMM domain-containing protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 73.224 71.772 2;3 2.9896E-13 92199 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.85 112.07 173040000 20092000 40729000 2393200 6403000 7707300 18903000 10302000 14047000 11989000 21476000 0 0 18994000 0 0 31416 4712 28669 264130;264131;264132;264133;264134;264135;264136;264137;264138;264139;264140 209751;209752;209753;209754;209755;209756;209757;209758;209759;209760 209755 10 LPAELQELPGLSHQYWSAPSDK Unmodified 2465.2227 0.22268931 1222 P27695 APEX1 DNA-(apurinic or apyrimidinic site) lyase;DNA-(apurinic or apyrimidinic site) lyase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 92.077 85.556 3 1.8943E-10 108287 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.251 67.691 129660000 40009000 89656000 0 0 0 0 0 0 0 0 0 0 0 0 0 31417 1222 28670 264141;264142 209761;209762 209761 1 LPAEPLEK Unmodified 895.50148 0.50148335 1738 P54277 PMS1 PMS1 protein homolog 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 37.829 38.012 2 0.030437 41909 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 55.531 11.716 67741000 0 0 0 5065100 5432800 6657700 6744800 0 5536200 7676900 7728100 7934000 1416900 6686800 6861600 31418 1738 28671 264143;264144;264145;264146;264147;264148;264149;264150;264151;264152;264153 209763 209763 1 LPAFGGVIPATEPR Unmodified 1423.7823 0.78234966 2763 Q5SXM2 SNAPC4 snRNA-activating protein complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 80.86 81.075 2 0.0036644 93445 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.374 43.674 6099700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6099700 31419 2763 28672 264154;264155;264156;264157 209764;209765;209766;209767 209765 4 LPAHTVGDVK Unmodified 1035.5713 0.57129425 1239 P28799 GRN Granulins;Acrogranin;Paragranulin;Granulin-1;Granulin-2;Granulin-3;Granulin-4;Granulin-5;Granulin-6;Granulin-7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 27.44 23.163 2 0.0016957 32855 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 128.38 77.776 85108000 46685000 18235000 20189000 0 0 0 0 0 0 0 0 0 0 0 0 31420 1239 28673 264158;264159;264160 209768;209769 209769 1 LPALTVHVTQPK Unmodified 1302.766 0.76597131 844 P07602 PSAP Prosaposin;Saposin-A;Saposin-B-Val;Saposin-B;Saposin-C;Saposin-D yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 61.273 61.374 3 0.021272 69891 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 28.206 17.28 29287000 0 0 0 0 1959400 3587900 2203700 0 0 7080900 0 0 2975900 3087600 8391200 31421 844 28674 264161;264162;264163;264164;264165;264166;264167 209770;209771 209770 1 LPANHPLLTGQR Unmodified 1315.7361 0.73606817 1398 P38606 ATP6V1A V-type proton ATPase catalytic subunit A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 1 2 2 2 1 2 1 2 2 2 2 37.816 38.017 2;3 0.0006714 42172 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 73.881 54.75 311590000 0 0 0 20431000 9413600 36394000 19451000 20198000 10457000 26012000 39666000 34818000 26074000 24337000 44341000 31422 1398 28675 264168;264169;264170;264171;264172;264173;264174;264175;264176;264177;264178;264179;264180;264181;264182;264183;264184;264185;264186;264187;264188 209772;209773;209774;209775;209776;209777;209778;209779;209780;209781;209782;209783;209784 209772 10 LPANLLYK Unmodified 930.55385 0.55385327 4679 Q9NVR2 INTS10 Integrator complex subunit 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 62.359 62.45 2 0.013529 71214 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 72.138 18.584 65128000 0 0 0 4697500 5087700 4146200 4441600 5593100 0 6247500 6754400 8496000 5061800 5593300 9009000 31423 4679 28676 264189;264190;264191;264192;264193;264194;264195;264196;264197;264198;264199 209785;209786;209787;209788;209789;209790;209791;209792;209793 209786 9 LPASDSAEASNSR Unmodified 1303.6004 0.60042213 2726 Q5H9F3 BCORL1 BCL-6 corepressor-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 15.273 15.33 2 0.0073387 14953 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 45.829 28.009 12286000 0 0 0 2372500 1235300 1802800 1278300 0 0 0 0 2932300 0 2664500 0 31424 2726 28677 264200;264201;264202;264203;264204;264205;264206 209794;209795;209796;209797;209798;209799 209797 6 LPASPSGSEDLSSVSSSPTSSPK Unmodified 2203.0492 0.049201202 4823 Q9P2N6 KANSL3 KAT8 regulatory NSL complex subunit 3 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 16 1 1 2 1 2 1 1 1 1 1 2 2 55.285 55.447 2;3 4.3702E-55 62336 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 155.1 142.93 79397000 0 0 0 2817100 3619600 6304900 4052000 10370000 3897300 4509200 7358300 8389400 6040000 9244900 12794000 31425 4823 28678 264207;264208;264209;264210;264211;264212;264213;264214;264215;264216;264217;264218;264219;264220;264221;264222 209800;209801;209802;209803;209804;209805;209806;209807;209808 209801 9 LPATAAEPEAAVISNGEH Unmodified 1775.869 0.86899241 2057 Q01581 HMGCS1 Hydroxymethylglutaryl-CoA synthase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 63.623 63.703 2 2.3971E-83 72121 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 179.67 169.06 57973000 0 0 0 4167200 4603300 5934600 0 4410000 0 3798200 7874300 6754400 3074100 5100300 12257000 31426 2057 28679 264223;264224;264225;264226;264227;264228;264229;264230;264231;264232 209809;209810;209811;209812;209813;209814;209815;209816;209817;209818 209811 10 LPAVVTADLR Unmodified 1053.6182 0.61824444 1394 P38117 ETFB Electron transfer flavoprotein subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 69.134 69.204 2 0.0074 78541 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.558 14.522 104190000 0 0 0 4892300 6485800 10202000 8422600 6200300 0 7862300 10251000 13679000 8010700 8137100 20047000 31427 1394 28680 264233;264234;264235;264236;264237;264238;264239;264240;264241;264242;264243 209819;209820;209821;209822;209823;209824;209825;209826;209827;209828;209829 209822 11 LPCEMDAQGPK Unmodified 1244.5529 0.55294335 4880 Q9UGI8 TES Testin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37.369 36.91 2 0.00032058 39955 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.502 86.108 774120000 0 682860000 1491700 3583400 3801900 4056600 4260200 3263100 2528600 5442100 10983000 10848000 4877600 9284100 26837000 31428 4880 28681 264244;264245;264246;264247;264248;264249;264250;264251;264252;264253;264254;264255;264256;264257 209830;209831;209832;209833;209834;209835;209836;209837;209838;209839;209840;209841 209833 12 LPCEMDAQGPK Oxidation (M) 1260.5479 0.54785797 4880 Q9UGI8 TES Testin yes yes 0 1 0 By MS/MS By MS/MS 2 0 3 2 1 26.609 21.813 2 0.011393 28556 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.191 53.833 110460000 5041600 105420000 0 0 0 0 0 0 0 0 0 0 0 0 0 31429 4880 28681 264258;264259;264260 209842;209843;209844 209842 6237 3 LPDDQIPK Unmodified 924.49165 0.49164694 2064 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38.839 37.952 2 0.0057994 43009 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 126.28 94.989 4370100000 110370000 1831100000 10626000 132920000 185530000 184480000 162470000 188460000 134850000 219010000 239720000 257830000 177730000 211060000 323900000 31430 2064 28682 264261;264262;264263;264264;264265;264266;264267;264268;264269;264270;264271;264272;264273;264274;264275 209845;209846;209847;209848;209849;209850;209851;209852;209853;209854;209855;209856 209856 8 LPDDTTFPLPPPRPK Unmodified 1689.909 0.90900673 4950 Q9UJY5 GGA1 ADP-ribosylation factor-binding protein GGA1 yes yes 0 0 1 By matching By matching By matching By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 73.7 73.713 3 0.033944 85054 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 17.962 13.494 44113000 0 0 0 2728100 0 11889000 0 5960800 0 8131000 0 8085900 7318400 0 0 31431 4950 28683 264276;264277;264278;264279;264280;264281 209857;209858 209857 2 LPDFLTAK Unmodified 903.50657 0.50656873 4278 Q9BZZ5 API5 Apoptosis inhibitor 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 73 73.108 2 0.041805 83971 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 49.833 26.31 81828000 0 0 0 3608200 0 13027000 3621500 4292100 6182600 9150700 8380900 7790800 8034900 7031500 10707000 31432 4278 28684 264282;264283;264284;264285;264286;264287;264288;264289;264290;264291;264292 209859 209859 1 LPDFSFQEDK Unmodified 1224.5663 0.56626845 3086 Q7Z3T8 ZFYVE16 Zinc finger FYVE domain-containing protein 16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 73.574 72.584 2 0.0088856 83022 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.955 43.747 114310000 0 85229000 0 0 2473400 6006300 3498200 3592400 0 0 0 0 0 5162200 8347200 31433 3086 28685 264293;264294;264295;264296;264297;264298;264299;264300;264301 209860;209861;209862;209863;209864;209865 209862 6 LPDGFTQLR Unmodified 1045.5556 0.55564418 2381 Q14160 SCRIB Protein scribble homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 64.307 64.469 2 0.0077155 74227 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 71.692 44.73 172150000 0 0 0 0 10633000 14231000 12340000 11626000 8999600 19396000 17344000 20364000 13496000 12866000 30856000 31434 2381 28686 264302;264303;264304;264305;264306;264307;264308;264309;264310;264311;264312 209866;209867;209868 209868 3 LPDGPTGSSEEEEEFLEIPPFNK Unmodified 2560.1857 0.18569468 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 1 3 2 94.136 89.79 2;3 1.4199E-12 107877 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 46.415 45.008 48111000 7432500 36118000 4560300 0 0 0 0 0 0 0 0 0 0 0 0 31435 2203 28687 264313;264314;264315;264316;264317;264318 209869;209870;209871;209872;209873;209874;209875;209876 209871 7 LPDGSEIPLPPILLGR Unmodified 1685.9716 0.97160699 3910 Q96KP4 CNDP2 Cytosolic non-specific dipeptidase yes yes 0 0 0 By MS/MS 10 0 1 1 97.19 97.353 2 1.025E-14 112962 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 99.283 90.328 5117800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5117800 31436 3910 28688 264319 209877 209877 1 LPDGSSFTNQFPSDAPLEEAR Unmodified 2277.055 0.054955282 3630 Q92575 UBXN4 UBX domain-containing protein 4 yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 81.187 81.336 2 0.00025134 94284 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 63.037 50.872 12842000 0 0 0 0 0 0 0 0 0 4353100 2733900 5754600 0 0 0 31437 3630 28689 264320;264321;264322 209878 209878 1 LPDGTSLTQTFR Unmodified 1334.683 0.68302954 2100 Q04323 UBXN1 UBX domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.062 69.139 2 3.1642E-08 78693 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 128.81 95.812 312980000 0 0 0 13155000 11826000 22839000 19785000 19926000 10739000 28309000 32584000 36401000 19110000 31698000 66608000 31438 2100 28690 264323;264324;264325;264326;264327;264328;264329;264330;264331;264332;264333;264334 209879;209880;209881;209882 209880 3 LPDGYEFK Unmodified 967.4651 0.46509784 881 P09382 LGALS1 Galectin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 52.201 52.354 2 0.020713 57939 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.573 43.767 553290000 0 0 0 11329000 14750000 0 13753000 10783000 9467900 19675000 92848000 63294000 20557000 72381000 224450000 31439 881 28691 264335;264336;264337;264338;264339;264340;264341;264342;264343;264344;264345 209883;209884;209885 209883 3 LPDIFEAQIAGLR Unmodified 1441.7929 0.79291434 69;88 CON__P08729;CON__Q3KNV1;P08729 KRT7 Keratin, type II cytoskeletal 7 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 90.778 90.924 2 0.0040802 105306 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.303 48.711 + 14554000 0 0 0 0 0 1600700 580370 1343300 1258100 3155100 1756500 0 0 1221300 3638700 31440 69;88 28692 264346;264347;264348;264349;264350;264351;264352;264353 209886;209887;209888;209889;209890;209891;209892 209888 6 LPDIFQSYDR Unmodified 1252.6088 0.60880197 2841 Q658Y4;P0C866 FAM91A1;LINC00869 Protein FAM91A1;Putative uncharacterized protein encoded by LINC00869 yes no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 79.492 79.617 2 0.0051832 91994 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 78.934 68.224 23959000 0 0 0 0 0 4443500 1575700 2951700 0 3550100 0 0 2379700 2796300 6262400 31441 2841 28693 264354;264355;264356;264357;264358;264359;264360 209893;209894;209895;209896;209897;209898 209893 6 LPDLSPVENK Unmodified 1110.5921 0.59208927 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57.229 56.402 2 2.9427E-27 63414 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 195.88 183.6 571730000 9605800 9033600 0 32404000 34811000 33546000 40802000 42466000 41957000 52310000 51156000 58049000 52252000 42520000 70822000 31442 5216 28694 264361;264362;264363;264364;264365;264366;264367;264368;264369;264370;264371;264372;264373;264374 209899;209900;209901;209902;209903;209904;209905;209906;209907;209908;209909;209910;209911;209912;209913;209914 209910 15 LPDMLNAEIVLGNVQNAK Oxidation (M) 1954.0194 0.019361819 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 1 0 By MS/MS 2.33 0.471 2 1 3 89.617 85.283 2;3 5.3412E-28 106059 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.51 108.37 37516000 0 37516000 0 0 0 0 0 0 0 0 0 0 0 0 0 31443 528 28695 264375;264376;264377 209915;209916;209917 209916 685 2 LPDMLNAEIVLGNVQNAK Unmodified 1938.0244 0.024447197 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 0 By MS/MS 2 0 2 2 96.442 91.62 2;3 3.5225E-05 113485 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.17 112.97 43595000 0 43595000 0 0 0 0 0 0 0 0 0 0 0 0 0 31444 528 28695 264378;264379 209918;209919 209918 2 LPDNYTQDTWRK Unmodified 1535.7369 0.73685603 2331 Q13619 CUL4A Cullin-4A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 44.558 44.801 3 0.0050729 49599 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 39.999 28.207 198360000 0 0 0 11470000 0 17666000 12607000 14793000 0 16424000 22458000 17425000 29750000 18307000 37456000 31445 2331 28696 264380;264381;264382;264383;264384;264385;264386;264387;264388;264389 209920;209921;209922;209923;209924;209925;209926 209925 6 LPDPFTPNLK Unmodified 1140.6179 0.61791009 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.969 77.031 2 0.00012383 89010 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 151.97 129.23 272160000 0 0 0 10409000 17552000 21192000 19108000 21923000 13198000 22136000 22507000 29323000 23713000 32860000 38238000 31446 19 28697 264390;264391;264392;264393;264394;264395;264396;264397;264398;264399;264400;264401 209927;209928;209929;209930;209931;209932;209933;209934;209935;209936;209937 209927 11 LPDSFFKPPEPK Unmodified 1400.734 0.73400248 1516 P46937 YAP1 Transcriptional coactivator YAP1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 72.898 71.687 3 0.0032323 81019 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.576 42.524 384890000 159140000 44859000 0 5352200 4993100 5024900 8373900 7609100 6681200 12864000 20735000 31730000 10383000 20806000 46339000 31447 1516 28698 264402;264403;264404;264405;264406;264407;264408;264409;264410;264411;264412;264413;264414;264415;264416;264417 209938;209939;209940;209941;209942;209943;209944;209945 209940 6 LPDTGEGPSR Unmodified 1027.4934 0.49343786 2854 Q68CZ2 TNS3 Tensin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 20.868 21.049 2 0.0095404 21881 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 57.59 23.793 80532000 0 0 0 5355700 6491000 8304800 6601800 4265800 5173000 9595700 9774100 11064000 0 0 13906000 31448 2854 28699 264418;264419;264420;264421;264422;264423;264424;264425;264426;264427;264428 209946;209947;209948;209949;209950;209951;209952;209953;209954;209955;209956;209957 209956 12 LPDTTSIFALK Unmodified 1204.6703 0.67033959 2037 Q00536 CDK16 Cyclin-dependent kinase 16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 83.431 82.781 2 0.00036177 95388 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.913 47.868 107930000 0 26056000 1789700 2753200 3699200 7997100 5062400 4644000 4391000 5941800 8738600 5228600 8232700 8351900 15047000 31449 2037 28700 264429;264430;264431;264432;264433;264434;264435;264436;264437;264438;264439;264440;264441;264442;264443 209958;209959;209960;209961;209962;209963;209964;209965;209966;209967;209968;209969;209970;209971;209972 209962 15 LPEACSIGDGK Unmodified 1145.5387 0.53867349 4476 Q9H9Q4 NHEJ1 Non-homologous end-joining factor 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 38.944 34.145 2 0.00051738 44220 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.81 93.577 67254000 0 67254000 0 0 0 0 0 0 0 0 0 0 0 0 0 31450 4476 28701 264444;264445 209973 209973 1 LPEAQQR Unmodified 840.44537 0.44536545 2379 Q14155 ARHGEF7 Rho guanine nucleotide exchange factor 7 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 11.234 11.321 2 0.026085 9765 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 79.454 29.334 20085000 0 0 0 1450000 771380 0 1822900 1406800 1523300 5380000 0 5769100 1961900 0 0 31451 2379 28702 264446;264447;264448;264449;264450;264451;264452;264453 209974 209974 1 LPEASQSPLVLK Unmodified 1280.734 0.73400248 2272 Q13330 MTA1 Metastasis-associated protein MTA1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.487 66.572 2 0.0016661 76207 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 79.659 51.646 135260000 0 0 0 7406200 8314500 10310000 10438000 11073000 8933300 12039000 10636000 14719000 13719000 11493000 16175000 31452 2272 28703 264454;264455;264456;264457;264458;264459;264460;264461;264462;264463;264464;264465 209975;209976;209977;209978;209979;209980;209981;209982;209983;209984;209985 209976 11 LPEAVQLIEK Unmodified 1138.6598 0.65977491 4059 Q99747 NAPG Gamma-soluble NSF attachment protein yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 78.61 75.003 2 0.0050137 90073 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 86.882 48.795 97547000 0 93037000 4509200 0 0 0 0 0 0 0 0 0 0 0 0 31453 4059 28704 264466;264467;264468 209986;209987 209986 2 LPEDDEPPARPPPPPPASVSPQAEPVWTPPAPAPAAPPSTPAAPK Unmodified 4491.2751 0.27506582 4566 Q9NQC3 RTN4 Reticulon-4 yes yes 0 0 1 By MS/MS By matching By matching 10 0 3 1 1 1 83.186 83.179 4 0.0057536 96249 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 14.572 13.434 14066000 0 0 0 0 5622600 2781900 0 5661900 0 0 0 0 0 0 0 31454 4566 28705 264469;264470;264471 209988 209988 1 LPEDLTVK Unmodified 913.51205 0.51204804 1389 P37275 ZEB1 Zinc finger E-box-binding homeobox 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 52.287 46.952 2 0.028065 60802 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.923 11.123 44620000 0 44620000 0 0 0 0 0 0 0 0 0 0 0 0 0 31455 1389 28706 264472;264473 209989 209989 1 LPEDPLLSGLLDSPALK Unmodified 1776.9873 0.98731663 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 4 12 1 2 1 1 1 1 1 2 2 1 1 2 97.376 96.29 2;3 6.6017E-127 112721 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 241.52 234.86 226750000 3691200 127380000 0 1841300 0 2188400 1222400 0 1555900 25531000 10704000 2652200 0 2979900 47005000 31456 1565 28707 264474;264475;264476;264477;264478;264479;264480;264481;264482;264483;264484;264485;264486;264487;264488;264489 209990;209991;209992;209993;209994;209995;209996;209997;209998;209999;210000;210001;210002 209991 10 LPEDVLLK Unmodified 925.54843 0.54843354 3652 Q92696 RABGGTA Geranylgeranyl transferase type-2 subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 65.404 65.485 2 0.035078 75194 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 52.716 21.427 46965000 0 0 0 2005600 1794400 3785200 2508300 2373400 0 4030500 5009200 6178500 3554200 4441000 11285000 31457 3652 28708 264490;264491;264492;264493;264494;264495;264496;264497;264498;264499;264500 210003 210003 1 LPEEEGLGEK Unmodified 1099.5397 0.53971935 622 O95149 SNUPN Snurportin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 6.25 3.77 1 1 2 2 1 1 38.436 33.637 2 0.012581 43799 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.692 42.543 266580000 0 266580000 0 0 0 0 0 0 0 0 0 0 0 0 0 31458 622 28709 264501;264502;264503;264504 210004;210005;210006 210006 3 LPEEMGLLQGSSGDK Unmodified 1559.7501 0.75012283 1472 P43121 MCAM Cell surface glycoprotein MUC18 yes yes 0 0 0 By MS/MS 2 0 1 1 75.485 70.545 2 9.4174E-38 88398 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.99 105.52 41576000 0 41576000 0 0 0 0 0 0 0 0 0 0 0 0 0 31459 1472 28710 264505 210007 210007 1 LPEEPEAESK Unmodified 1127.5346 0.53463397 2594 Q15911 ZFHX3 Zinc finger homeobox protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 26.04 24.993 2 0.02179 25624 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 46.462 30.259 20519000 0 9005200 0 0 3480800 0 0 0 3301700 0 0 0 0 4731700 0 31460 2594 28711 264506;264507;264508;264509 210008;210009;210010;210011;210012 210010 5 LPEEPVLEDEQQQLEK Unmodified 1922.9473 0.94730231 2581 Q15811;CON__ENSEMBL:ENSBTAP00000001528 ITSN1 Intersectin-1 yes no 0 0 0 By MS/MS 10 0 1 1 72.419 72.789 2 7.4632E-05 83292 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.563 52.49 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31461 2581 28712 264510 210013 210013 1 LPEEVATPTTDEEK Unmodified 1557.741 0.74099793 671 O95602 POLR1A DNA-directed RNA polymerase I subunit RPA1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 44.466 44.738 2 1.3321E-13 50333 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 111.86 91.714 69356000 0 0 0 0 6752300 6893800 0 0 0 7385300 11936000 12141000 0 9396100 14852000 31462 671 28713 264511;264512;264513;264514;264515;264516;264517;264518 210014;210015;210016;210017;210018;210019;210020;210021 210014 8 LPEFYDETLLRSK Unmodified 1609.8352 0.83517309 2525 Q15386 UBE3C Ubiquitin-protein ligase E3C yes yes 0 0 1 By MS/MS 2 0 1 1 84.083 75.952 3 0.0023644 99247 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.115 53.979 10248000 10248000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31463 2525 28714 264519 210022 210022 1 LPEGDLGK Unmodified 827.43888 0.43888309 1949 P63241;Q6IS14 EIF5A;EIF5AL1 Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-1-like yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.279 27.477 2 0.036695 29664 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.736 26.285 212190000 0 0 0 6725600 4951900 10044000 10110000 6574600 5933300 10519000 31242000 29719000 9708300 20292000 66374000 31464 1949 28715 264520;264521;264522;264523;264524;264525;264526;264527;264528;264529;264530;264531 210023 210023 1 LPEGHLPEGAGLK Unmodified 1316.7089 0.70885036 3226 Q8IVF2 AHNAK2 Protein AHNAK2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 57.471 51.486 3 0.013386 69995 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 32.734 11.504 60266000 9261800 19754000 31251000 0 0 0 0 0 0 0 0 0 0 0 0 31465 3226 28716 264532;264533;264534 210024;210025 210025 2 LPEGHVLEGAGLK Unmodified 1318.7245 0.72450043 3226 Q8IVF2 AHNAK2 Protein AHNAK2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 61.364 55.323 3 0.001652 68356 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 78.324 63.122 20522000 14410000 0 6111800 0 0 0 0 0 0 0 0 0 0 0 0 31466 3226 28717 264535;264536 210026;210027;210028 210028 3 LPEGHVPEGAGLK Unmodified 1302.6932 0.6932003 3226 Q8IVF2 AHNAK2 Protein AHNAK2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 43.112 41.833 3 0.0068359 52919 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 63.091 28.706 689850000 16123000 179300000 152050000 23509000 23023000 29498000 29570000 38982000 30138000 37034000 51769000 0 35939000 42911000 0 31467 3226 28718 264537;264538;264539;264540;264541;264542;264543;264544;264545;264546;264547;264548;264549 210029;210030 210029 0 LPEGPLPEGAGFK Unmodified 1310.6871 0.68705229 3226 Q8IVF2 AHNAK2 Protein AHNAK2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.55 1 1 4 2 1 1 1 1 71.922 70.581 2 0.0022754 88237 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.07 55.641 70198000 0 60252000 0 0 0 2475900 1910200 0 0 0 3516800 0 0 2043600 0 31468 3226 28719 264550;264551;264552;264553;264554;264555 210031;210032;210033 210032 3 LPEGPLPEGASLK Unmodified 1306.7133 0.71326704 3226 Q8IVF2 AHNAK2 Protein AHNAK2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.64 2.9 1 1 9 2 1 1 1 1 1 1 1 1 1 67.988 66.969 2 0.00060699 75863 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 76.143 58.279 103170000 0 63666000 0 2479900 3241400 4739900 0 3679000 0 5890100 0 0 3538400 6752200 9187100 31469 3226 28720 264556;264557;264558;264559;264560;264561;264562;264563;264564;264565;264566 210034;210035;210036;210037;210038;210039;210040;210041 210039 8 LPEGPLPK Unmodified 849.496 0.49600404 3226 Q8IVF2 AHNAK2 Protein AHNAK2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 48.402 43.608 2 0.015109 56952 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.539 59.647 25216000 0 23901000 1315300 0 0 0 0 0 0 0 0 0 0 0 0 31470 3226 28721 264567;264568 210042 210042 1 LPEGPPNFLR Unmodified 1138.6135 0.61349341 461 O75146 HIP1R Huntingtin-interacting protein 1-related protein yes yes 0 0 0 By MS/MS By matching By MS/MS By matching 10 0 4 1 1 1 1 74.736 74.751 2 0.010798 86663 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 55.37 44.148 11545000 0 0 0 2499000 0 0 0 0 0 0 0 0 2099500 2148600 4797500 31471 461 28722 264569;264570;264571;264572 210043 210043 1 LPEGPVPEGAGLK Unmodified 1262.6871 0.68705229 3226 Q8IVF2 AHNAK2 Protein AHNAK2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 58.833 58.484 2 1.9971E-08 74457 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.84 88.752 222970000 0 137380000 0 5339100 6004100 6279300 7796500 5792400 6841500 6316300 6301400 8702300 7924300 7021700 11271000 31472 3226 28723 264573;264574;264575;264576;264577;264578;264579;264580;264581;264582;264583;264584;264585 210044;210045;210046;210047;210048;210049;210050;210051;210052;210053;210054;210055;210056 210047 13 LPEGPVPEGAGPK Unmodified 1246.6558 0.65575216 3226 Q8IVF2 AHNAK2 Protein AHNAK2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 46.937 46.029 2 0.00309 51597 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.467 37.955 78042000 0 17929000 0 6110200 0 5488300 5285500 9400100 6202400 7713800 0 9085900 0 0 10827000 31473 3226 28724 264586;264587;264588;264589;264590;264591;264592;264593;264594;264595 210057;210058;210059;210060;210061 210061 5 LPEGPVPEGASLK Unmodified 1292.6976 0.69761697 3226 Q8IVF2 AHNAK2 Protein AHNAK2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 63.331 57.994 2 4.7667E-07 74530 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.77 79.462 49178000 0 49178000 0 0 0 0 0 0 0 0 0 0 0 0 0 31474 3226 28725 264596;264597 210062;210063 210062 1 LPEGQVPEGAGLK Unmodified 1293.6929 0.69286595 3226 Q8IVF2 AHNAK2 Protein AHNAK2 yes no 0 0 0 By MS/MS 2 0 1 1 55.099 49.293 2 4.0494E-08 63782 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.83 92.864 106290000 0 106290000 0 0 0 0 0 0 0 0 0 0 0 0 0 31475 3226 28726 264598 210064 210064 1 LPEHPEGGEPEDDEAPAK Unmodified 1915.8436 0.84356552 4718 Q9NX58 LYAR Cell growth-regulating nucleolar protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 31.231 30.349 3 8.498E-05 40800 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.053 42.461 142780000 18686000 36001000 0 4236800 4332600 7611400 4867800 3587700 7883200 9005000 7731200 12542000 7960500 7503000 10830000 31476 4718 28727 264599;264600;264601;264602;264603;264604;264605;264606;264607;264608;264609;264610;264611;264612;264613 210065;210066;210067;210068;210069;210070;210071;210072;210073;210074;210075;210076;210077;210078;210079;210080;210081 210076 14 LPELFETGR Unmodified 1060.5553 0.55530983 1971 P78318 IGBP1 Immunoglobulin-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.741 72.809 2 0.0083723 84147 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 69.812 44.993 106750000 0 0 0 5858700 6170800 11421000 5329400 5916700 5160000 9239200 11045000 11721000 7052800 10113000 17726000 31477 1971 28728 264614;264615;264616;264617;264618;264619;264620;264621;264622;264623;264624;264625 210082;210083;210084;210085;210086;210087 210085 6 LPELKPVDK Unmodified 1037.6121 0.61209643 4653 Q9NUQ8 ABCF3 ATP-binding cassette sub-family F member 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42.438 41.966 2 0.021799 53798 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 102.46 74.978 247550000 0 9653100 15921000 12772000 12605000 16276000 15514000 15603000 14910000 22900000 23710000 23717000 24825000 15713000 23433000 31478 4653 28729 264626;264627;264628;264629;264630;264631;264632;264633;264634;264635;264636;264637;264638;264639 210088;210089;210090 210089 0 LPELLLK Unmodified 824.53714 0.53714057 2231 Q13085 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 77.315 76.089 2 0.026237 87629 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 79.146 4.7303 615810000 194340000 155090000 96721000 0 0 19530000 11135000 12145000 10356000 19443000 20017000 20326000 15012000 14541000 27161000 31479 2231 28730 264640;264641;264642;264643;264644;264645;264646;264647;264648;264649;264650;264651;264652;264653 210091;210092;210093;210094;210095;210096;210097;210098 210091 8 LPELQGVETELCYNVNWTAEALPSAEETK Unmodified 3290.5653 0.56528876 248 O15067 PFAS Phosphoribosylformylglycinamidine synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.71 0.452 2 5 3 3 1 96.407 92.492 3;4 2.1124E-91 96301 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 138.41 133.45 141820000 125830000 11315000 4674400 0 0 0 0 0 0 0 0 0 0 0 0 31480 248 28731 264654;264655;264656;264657;264658;264659;264660 210099;210100;210101;210102;210103 210100 5 LPEMAFSPDCPK Oxidation (M) 1406.621 0.62102291 644 O95352 ATG7 Ubiquitin-like modifier-activating enzyme ATG7 yes yes 0 1 0 By MS/MS By matching 2.33 0.471 2 1 2 1 55.047 50.183 2 5.4913E-05 64729 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.568 83.315 41424000 0 40803000 621160 0 0 0 0 0 0 0 0 0 0 0 0 31481 644 28732 264661;264662;264663 210104;210105;210106 210104 782 3 LPEMAFSPDCPK Unmodified 1390.6261 0.62610829 644 O95352 ATG7 Ubiquitin-like modifier-activating enzyme ATG7 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 74.417 69.973 2 0.027333 84294 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 51.445 34.905 157920000 0 157920000 0 0 0 0 0 0 0 0 0 0 0 0 0 31482 644 28732 264664;264665 210107 210107 1 LPENYTDETWQK Unmodified 1522.694 0.69398816 2332 Q13620 CUL4B Cullin-4B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 54.758 53.805 2 9.1384E-11 67534 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 155.98 128.86 474210000 0 372220000 1865300 0 7223400 9635100 11835000 7678000 0 11772000 11964000 9943000 7466800 6970500 15628000 31483 2332 28733 264666;264667;264668;264669;264670;264671;264672;264673;264674;264675;264676;264677;264678;264679;264680 210108;210109;210110;210111;210112;210113;210114;210115;210116;210117;210118;210119;210120;210121;210122 210111 15 LPEPLFTNDK Unmodified 1172.6077 0.60773933 2776 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 67.483 67.211 2 0.0027291 77579 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 80.688 49.459 91419000 0 14018000 0 3119700 4996300 5753500 5696100 5608900 4764900 8409700 7740500 7875300 5986100 5493800 11956000 31484 2776 28734 264681;264682;264683;264684;264685;264686;264687;264688;264689;264690;264691;264692;264693 210123;210124;210125;210126;210127;210128;210129;210130;210131;210132;210133;210134;210135;210136 210136 14 LPEPSASLPNPPSK Unmodified 1432.7562 0.75619449 2794 Q5TBB1 RNASEH2B Ribonuclease H2 subunit B yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 6.83 3.76 3 2 7 4 1 1 1 1 1 1 1 1 62.237 60.248 2;3 4.8929E-39 72924 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 196.24 196.24 272380000 0 239980000 1450900 0 3326400 3020000 4117900 0 0 4312700 4462400 4866100 0 0 6847400 31485 2794 28735 264694;264695;264696;264697;264698;264699;264700;264701;264702;264703;264704;264705 210137;210138;210139;210140;210141;210142;210143;210144 210142 8 LPEPSVLSEVTK Unmodified 1297.7129 0.71293269 4272 Q9BZL4 PPP1R12C Protein phosphatase 1 regulatory subunit 12C yes yes 0 0 0 By MS/MS 10 0 1 1 28.128 28.825 3 0.044628 30657 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 22.72 6.1906 18999000 0 0 0 0 0 0 0 0 0 0 0 18999000 0 0 0 31486 4272 28736 264706 210145 210145 1 LPEQLSEK Unmodified 942.50221 0.50221163 5276 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 35.197 30.548 2 0.019396 39953 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.18 53.754 27429000 0 27429000 0 0 0 0 0 0 0 0 0 0 0 0 0 31487 5276 28737 264707;264708 210146 210146 0 LPETNLFETEETRK Unmodified 1705.8523 0.85227972 2485 Q15046 KARS Lysine--tRNA ligase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.9 3.81 6 2 12 3 3 2 1 1 1 1 1 1 1 1 1 1 1 1 65.987 63.789 2;3 8.5799E-30 85776 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 135.86 116.46 1868600000 135570000 549910000 710660000 15227000 16360000 36683000 18344000 21175000 13173000 26331000 56351000 57509000 30786000 42531000 137950000 31488 2485 28738 264709;264710;264711;264712;264713;264714;264715;264716;264717;264718;264719;264720;264721;264722;264723;264724;264725;264726;264727;264728 210147;210148;210149;210150;210151;210152;210153;210154;210155;210156;210157;210158;210159;210160;210161;210162;210163;210164;210165;210166 210156 20 LPETQVLPGEIDETPLSK Unmodified 1965.0306 0.030638012 3226 Q8IVF2 AHNAK2 Protein AHNAK2 yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 81.18 81.307 2 0.0061838 93695 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 49.423 41.512 8713600 0 0 0 0 0 2773600 0 3418000 2522000 0 0 0 0 0 0 31489 3226 28739 264729;264730;264731 210167 210167 1 LPEVQQATK Unmodified 1012.5553 0.55530983 2289 Q13428 TCOF1 Treacle protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 29.015 29.199 2 1.7897E-05 31540 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 133.58 77.46 483040000 0 0 0 33522000 31509000 27486000 34627000 30803000 25813000 47028000 72167000 49500000 55004000 0 75583000 31490 2289 28740 264732;264733;264734;264735;264736;264737;264738;264739;264740;264741;264742;264743 210168;210169;210170;210171;210172;210173;210174;210175;210176;210177;210178;210179;210180 210170 10 LPEYFFENK Unmodified 1185.5706 0.57062555 4236 Q9BXW9 FANCD2 Fanconi anemia group D2 protein yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 78.841 75.14 2 0.019731 91423 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 89.752 70.392 96470000 0 70840000 25631000 0 0 0 0 0 0 0 0 0 0 0 0 31491 4236 28741 264744;264745 210181 210181 1 LPFAAAQIGNSFR Unmodified 1390.7357 0.73573382 1440 P41250 GARS Glycine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.264 81.324 2 1.0265E-12 94104 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 159.83 133.31 293090000 0 0 0 5142800 9888800 25411000 9950300 9558100 10529000 21893000 30255000 35955000 18811000 28328000 87370000 31492 1440 28742 264746;264747;264748;264749;264750;264751;264752;264753;264754;264755;264756;264757 210182;210183;210184;210185;210186;210187;210188;210189;210190;210191;210192;210193 210191 11 LPFDTPPIGK Unmodified 1083.5964 0.59644637 3708 Q93073 SECISBP2L Selenocysteine insertion sequence-binding protein 2-like yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 78.26 74.183 2 0.008457 92654 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.264 46.136 20352000 0 20352000 0 0 0 0 0 0 0 0 0 0 0 0 0 31493 3708 28743 264758;264759 210194 210194 1 LPFEQAESNMK Unmodified 1292.6071 0.60708741 4360 Q9H270 VPS11 Vacuolar protein sorting-associated protein 11 homolog yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 60.357 55.009 2 0.0031726 70990 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.15 93.638 52637000 0 52637000 0 0 0 0 0 0 0 0 0 0 0 0 0 31494 4360 28744 264760;264761 210195;210196 210195 1 LPFEQAESNMK Oxidation (M) 1308.602 0.60200203 4360 Q9H270 VPS11 Vacuolar protein sorting-associated protein 11 homolog yes yes 0 1 0 By MS/MS 3 0 1 1 46.783 41.924 2 0.00019805 52188 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 110.53 88.837 12862000 0 12862000 0 0 0 0 0 0 0 0 0 0 0 0 0 31495 4360 28744 264762 210197 210197 5821 1 LPFFNMLDELLK Unmodified 1478.7843 0.78432349 3316 Q8N2W9 PIAS4 E3 SUMO-protein ligase PIAS4 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 77.482 77.644 2 0.037863 89692 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 35.357 20.091 53319000 0 0 0 0 0 0 0 0 0 0 35617000 0 0 17702000 0 31496 3316 28745 264763;264764 210198 210198 1 LPFPIIDDR Unmodified 1084.5917 0.59169534 1261 P30041 PRDX6 Peroxiredoxin-6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 83.067 83.13 2 0.0032294 96198 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 123.72 94.571 857730000 0 0 0 13832000 11144000 31461000 16490000 22701000 14140000 37221000 108150000 132630000 24504000 84346000 361110000 31497 1261 28746 264765;264766;264767;264768;264769;264770;264771;264772;264773;264774;264775;264776 210199;210200;210201;210202;210203;210204;210205;210206;210207;210208;210209;210210;210211 210205 13 LPFPIIDDRNR Unmodified 1354.7357 0.73573382 1261 P30041 PRDX6 Peroxiredoxin-6 yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.67 75.733 3 4.155E-27 87333 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 155.11 142.24 696880000 0 0 0 10187000 7983600 31355000 16096000 15088000 10666000 19660000 58187000 75053000 22323000 58126000 372160000 31498 1261 28747 264777;264778;264779;264780;264781;264782;264783;264784;264785;264786;264787;264788 210212;210213;210214;210215;210216;210217;210218;210219;210220 210219 1 LPFTDGDAQQLQRK Unmodified 1615.8318 0.83181904 2850 Q684P5 RAP1GAP2 Rap1 GTPase-activating protein 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 59.629 53.588 3 0.00054049 72599 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.16 51.898 9003000 6803200 0 2199900 0 0 0 0 0 0 0 0 0 0 0 0 31499 2850 28748 264789;264790 210221;210222 210221 1 LPFTDTEQECLVK Unmodified 1578.76 0.75995923 3601 Q8WYP5 AHCTF1 Protein ELYS yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 72.511 72.594 2 0.0003627 83573 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 81.017 67.354 24990000 0 0 0 0 3361400 0 3451900 3359200 0 0 0 5307300 5296300 4213900 0 31500 3601 28749 264791;264792;264793;264794;264795;264796;264797 210223;210224;210225;210226;210227;210228;210229 210228 7 LPFTFVTK Unmodified 951.54295 0.54295423 2893 Q6MZP7 LIN54 Protein lin-54 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.188 78.249 2 0.0099634 90840 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 81.191 52.768 105680000 0 0 0 5856100 4719700 8970100 6385700 8214700 8050300 10060000 9880800 9813000 8887900 10065000 14774000 31501 2893 28750 264798;264799;264800;264801;264802;264803;264804;264805;264806;264807;264808;264809 210230;210231;210232;210233;210234;210235;210236;210237 210236 8 LPFVINDGK Unmodified 1001.5546 0.55458155 2584 Q15818 NPTX1 Neuronal pentraxin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 69.649 69.058 2 0.0053328 90523 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.12 76.604 88352000 41100000 0 0 0 2466100 0 3527800 2801900 1722600 5004100 5203900 5748600 4692600 4897900 11187000 31502 2584 28751 264810;264811;264812;264813;264814;264815;264816;264817;264818;264819;264820 210238;210239;210240;210241;210242;210243;210244 210240 7 LPGAICSLTCGGADIGTAMAK Oxidation (M) 2078.9799 0.97988154 1573 P49419 ALDH7A1 Alpha-aminoadipic semialdehyde dehydrogenase yes yes 0 1 0 By MS/MS 3 0 1 1 79.522 76.151 3 3.6787E-07 91389 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 71.073 67.179 6862100 0 6862100 0 0 0 0 0 0 0 0 0 0 0 0 0 31503 1573 28752 264821 210245 210245 2526 1 LPGAICSLTCGGADIGTAMAK Unmodified 2062.985 0.98496692 1573 P49419 ALDH7A1 Alpha-aminoadipic semialdehyde dehydrogenase yes yes 0 0 0 By MS/MS 2 0 1 1 86.789 78.658 2 0.017107 102524 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 32.152 23.639 4561800 4561800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31504 1573 28752 264822 210246 210246 1 LPGDAAASSSAVK Unmodified 1172.6037 0.60371659 4753 Q9NYV6 RRN3 RNA polymerase I-specific transcription initiation factor RRN3 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 28.943 29.167 2 2.3993E-05 31394 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 90.05 69.53 116300000 0 0 0 0 6725500 13600000 11476000 14647000 0 15673000 0 17422000 12975000 11203000 12577000 31505 4753 28753 264823;264824;264825;264826;264827;264828;264829;264830;264831 210247;210248;210249;210250;210251;210252 210248 6 LPGEAPVIQR Unmodified 1078.6135 0.61349341 3615 Q92538 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.465 47.629 2 0.01862 54490 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 48.283 32.621 72997000 0 0 0 3634800 3900300 6291100 4952800 5733400 2293500 8637700 6951800 7239400 5697400 6803800 10861000 31506 3615 28754 264832;264833;264834;264835;264836;264837;264838;264839;264840;264841;264842;264843 210253;210254;210255;210256 210254 4 LPGEGNAGLLGLGPEAAAPGK Unmodified 1888.0054 0.005426314 1189 P25440 BRD2 Bromodomain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.56 1 1 13 2 1 1 2 1 1 1 1 1 1 1 1 1 81.617 81.075 2;3 2.8398E-28 93891 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 135.23 116.5 142980000 0 31517000 0 5468600 0 9722000 6379500 4960500 8303200 14052000 13296000 11720000 8944900 8477800 20142000 31507 1189 28755 264844;264845;264846;264847;264848;264849;264850;264851;264852;264853;264854;264855;264856;264857;264858 210257;210258;210259;210260;210261;210262;210263;210264;210265 210257 9 LPGELEPVQATQNK Unmodified 1522.7991 0.79912193 546 O75821 EIF3G Eukaryotic translation initiation factor 3 subunit G yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.56 3.86 3 1 5 1 2 1 1 1 1 1 1 57.027 54.734 2 5.4102E-67 69814 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 204.69 193.52 1589700000 34684000 1141600000 11307000 0 0 0 0 0 0 0 84765000 86833000 53371000 59198000 117990000 31508 546 28756 264859;264860;264861;264862;264863;264864;264865;264866;264867 210266;210267;210268;210269;210270;210271;210272;210273;210274;210275;210276;210277 210268 12 LPGGELNPGEDEVEGLK Unmodified 1751.8578 0.85775902 369 O43809 NUDT21 Cleavage and polyadenylation specificity factor subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 6 2 24 2 5 1 2 2 2 2 2 2 2 2 2 2 2 2 71.51 70.356 2;3 5.5702E-105 87451 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 251.68 224.2 7645100000 148700000 3588800000 25377000 146940000 249950000 276470000 257350000 287120000 294290000 477770000 393360000 414000000 272300000 294570000 518120000 31509 369 28757 264868;264869;264870;264871;264872;264873;264874;264875;264876;264877;264878;264879;264880;264881;264882;264883;264884;264885;264886;264887;264888;264889;264890;264891;264892;264893;264894;264895;264896;264897;264898;264899 210278;210279;210280;210281;210282;210283;210284;210285;210286;210287;210288;210289;210290;210291;210292;210293;210294;210295;210296;210297;210298;210299;210300;210301;210302;210303;210304;210305;210306;210307;210308;210309;210310;210311;210312;210313;210314;210315;210316;210317;210318;210319;210320;210321 210289 39 LPGGELNPGEDEVEGLKR Unmodified 1907.9589 0.95887005 369 O43809 NUDT21 Cleavage and polyadenylation specificity factor subunit 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 63.226 63.323 3 5.3297E-30 72201 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 112.74 98.042 221390000 0 0 0 14451000 17621000 0 15616000 0 6605700 23683000 20765000 54986000 21595000 16566000 29500000 31510 369 28758 264900;264901;264902;264903;264904;264905;264906;264907;264908;264909;264910 210322;210323;210324;210325;210326;210327;210328;210329;210330;210331;210332;210333;210334;210335;210336 210333 15 LPGGGGDDGAGR Unmodified 1027.4683 0.46828574 3264 Q8IXQ3 C9orf40 Uncharacterized protein C9orf40 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.32 13.476 2 0.0011738 12411 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 70.056 57.068 75223000 0 0 0 3304400 3064000 3223000 1189600 3671500 4182600 5033300 9827000 12052000 5015500 9094700 15566000 31511 3264 28759 264911;264912;264913;264914;264915;264916;264917;264918;264919;264920;264921;264922 210337;210338;210339;210340;210341;210342;210343;210344;210345 210341 9 LPGGVQNFPQFSALR Unmodified 1629.8627 0.86272524 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 84.824 84.95 2 3.7132E-28 98172 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 179.94 155.64 45545000 0 0 0 0 0 7156700 0 0 0 6791700 3690700 5259100 0 4420000 18227000 31512 3119 28760 264923;264924;264925;264926;264927;264928;264929 210346;210347;210348;210349;210350;210351;210352;210353 210349 8 LPGHAGSINEVAFHPDEPIIISASSDK Unmodified 2800.4032 0.40317287 3798 Q96DI7 SNRNP40 U5 small nuclear ribonucleoprotein 40 kDa protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 3.8 3.12 3 1 1 3 1 1 83.935 79.045 3;4 1.4867E-33 101152 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.003 86.972 251440000 209640000 24843000 0 0 0 0 0 0 0 0 0 0 0 0 16963000 31513 3798 28761 264930;264931;264932;264933;264934 210354;210355;210356;210357;210358;210359 210358 6 LPGLITSMETIGAK Unmodified 1429.7851 0.78505177 5058 Q9UPT5 EXOC7 Exocyst complex component 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 2 1 1 87.168 84.553 2 1.2401E-07 98371 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.937 69.598 26478000 15656000 0 0 0 0 0 0 0 0 0 0 0 0 2635200 8186300 31514 5058 28762 264935;264936;264937;264938;264939;264940;264941 210360;210361;210362;210363;210364;210365;210366 210361 7 LPGLITSMETIGAK Oxidation (M) 1445.78 0.7799664 5058 Q9UPT5 EXOC7 Exocyst complex component 7 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 72.616 72.834 2 0.00059995 83608 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 62.633 43.39 20419000 0 0 0 0 0 0 3120300 0 0 0 0 4946900 3757900 3631900 4962200 31515 5058 28762 264942;264943;264944;264945;264946;264947 210367;210368;210369;210370;210371 210367 6410 4 LPGNISSLNVECR Unmodified 1457.7297 0.72966216 3179 Q86W56 PARG Poly(ADP-ribose) glycohydrolase yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 67.119 67.014 2 0.0086065 76841 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 57.225 33.476 19936000 0 0 0 1515600 2347600 2508400 0 0 2545400 3617600 7401700 0 0 0 0 31516 3179 28763 264948;264949;264950;264951;264952;264953 210372;210373;210374 210373 3 LPGNTNVNYRK Unmodified 1274.6731 0.67313356 2195 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 24.706 25.089 3 0.020747 26573 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 30.392 19.869 65099000 0 0 0 0 0 0 0 6453000 9511600 13601000 8404600 14149000 0 0 12980000 31517 2195 28764 264954;264955;264956;264957;264958;264959 210375;210376;210377;210378 210375 4 LPGPAPDKPNVYDFK Unmodified 1656.8512 0.8511575 4539 Q9NP77 SSU72 RNA polymerase II subunit A C-terminal domain phosphatase SSU72 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.38 3.91 5 1 7 2 2 2 1 1 1 1 1 1 1 66.231 63.714 2;3 0.00026189 82851 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.106 69.692 337760000 94349000 89439000 85101000 0 0 0 4825100 0 2328800 6514700 12372000 0 9054800 12544000 21230000 31518 4539 28765 264960;264961;264962;264963;264964;264965;264966;264967;264968;264969;264970;264971;264972 210379;210380;210381;210382;210383;210384;210385;210386;210387;210388;210389;210390;210391;210392 210382 14 LPGQAPEGLK Unmodified 1008.5604 0.56039521 240 O15014 ZNF609 Zinc finger protein 609 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 37.777 38.018 2 0.011594 42134 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 53.965 30.115 91963000 0 0 0 0 5494900 6894700 7241400 6901100 5985100 8746800 8743800 9083000 11731000 7736700 13404000 31519 240 28766 264973;264974;264975;264976;264977;264978;264979;264980;264981;264982;264983 210393;210394;210395;210396;210397 210396 4 LPGQDESTAGTSEQNDILK Unmodified 2001.9491 0.94909323 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.42 2 1 1 24 2 2 2 2 2 2 2 2 2 2 2 2 2 55.142 54.853 2;3 0.00066505 62580 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 70.68 54.426 398020000 0 51725000 0 14284000 20700000 23590000 33535000 22243000 23053000 29403000 34543000 39964000 29475000 22691000 52809000 31520 5216 28767 264984;264985;264986;264987;264988;264989;264990;264991;264992;264993;264994;264995;264996;264997;264998;264999;265000;265001;265002;265003;265004;265005;265006;265007;265008;265009 210398;210399;210400;210401;210402;210403;210404;210405 210402 3 LPGQEGAAAPGEAGAVCLK Unmodified 1794.8934 0.89343302 3071 Q7Z2K8 GPRIN1 G protein-regulated inducer of neurite outgrowth 1 yes yes 0 0 0 By MS/MS 2 0 1 1 64.278 58.371 2 1.081E-05 74881 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.1 86.125 10371000 0 10371000 0 0 0 0 0 0 0 0 0 0 0 0 0 31521 3071 28768 265010 210406 210406 1 LPGTSHGGSK Unmodified 939.47739 0.47739386 28 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 6.8663 3.8035 2 0.00874 5282 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 77.732 55.601 241830000 5753900 105940000 130140000 0 0 0 0 0 0 0 0 0 0 0 0 31522 28 28769 265011;265012;265013;265014 210407;210408;210409 210408 3 LPHDPGVFR Unmodified 1036.5454 0.54541385 1628 P50548 ERF ETS domain-containing transcription factor ERF yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.474 43.649 2 0.037906 49022 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 45.081 22.95 183260000 0 0 0 7867500 6917900 13216000 13544000 11699000 13008000 12750000 17570000 28935000 15249000 12971000 29537000 31523 1628 28770 265015;265016;265017;265018;265019;265020;265021;265022;265023;265024;265025;265026 210410;210411;210412;210413 210410 4 LPHGSPDSK Unmodified 936.46649 0.46649483 2024 P98174 FGD1 FYVE, RhoGEF and PH domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 8.7769 5.8288 2 0.0090679 8620 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.358 64.501 21564000 0 12411000 9152800 0 0 0 0 0 0 0 0 0 0 0 0 31524 2024 28771 265027;265028;265029 210414;210415;210416 210414 3 LPHPAAPVTVK Unmodified 1128.6655 0.66552898 2142 Q07864 POLE DNA polymerase epsilon catalytic subunit A yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 50.854 44.896 2 0.028414 61931 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.751 36.511 15397000 13010000 0 2386700 0 0 0 0 0 0 0 0 0 0 0 0 31525 2142 28772 265030;265031 210417 210417 1 LPHPDLPAEEK Unmodified 1244.6401 0.6401021 2702 Q53GS9 USP39 U4/U6.U5 tri-snRNP-associated protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 50.92 46.999 3 0.01127 59151 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 38.58 28.271 5338600 0 0 5338600 0 0 0 0 0 0 0 0 0 0 0 0 31526 2702 28773 265032 210418 210418 1 LPHSVLLEIQK Unmodified 1275.7551 0.75507227 5261 Q9Y617 PSAT1 Phosphoserine aminotransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 5.58 3.75 4 3 5 4 2 1 1 1 1 1 1 72.58 69.746 2;3 6.1061E-06 92122 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 113.44 94.629 627390000 478330000 70911000 10920000 0 0 0 1866000 0 0 0 11385000 6613900 0 9086400 38282000 31527 5261 28774 265033;265034;265035;265036;265037;265038;265039;265040;265041;265042;265043;265044 210419;210420;210421;210422;210423;210424;210425;210426;210427;210428 210423 8 LPIAPLIMGSHPVDNK Unmodified 1700.9284 0.92836197 2558 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By matching By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 81.632 80.572 3 0.002758 92860 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.187 36.085 25680000 3599900 0 0 0 0 3473700 0 2145800 0 2452500 0 0 2480900 2474400 9052500 31528 2558 28775 265045;265046;265047;265048;265049;265050;265051 210429;210430 210429 1 LPIDVTEGEVISLGLPFGK Unmodified 1983.0928 0.092844338 1208 P26599 PTBP1 Polypyrimidine tract-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 99.45 94.052 2 1.3133E-17 117964 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 148.85 126.38 157820000 20284000 137540000 0 0 0 0 0 0 0 0 0 0 0 0 0 31529 1208 28776 265052;265053;265054 210431;210432 210432 2 LPIEETLEDSPQTR Unmodified 1626.8101 0.81008055 4965 Q9UKG1 APPL1 DCC-interacting protein 13-alpha yes yes 0 0 0 By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 65.846 66.001 2 1.2747E-13 75725 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 112.13 87.271 43754000 0 0 0 0 1435500 5750900 2397400 2619400 1884500 4493900 6537900 3813300 3353900 3954700 7512800 31530 4965 28777 265055;265056;265057;265058;265059;265060;265061;265062;265063;265064;265065 210433;210434;210435;210436;210437 210433 5 LPIGDVATQYFADR Unmodified 1564.7886 0.78855725 4065 Q99832 CCT7 T-complex protein 1 subunit eta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 83.473 83.536 2 2.9181E-16 95810 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 119.45 109.79 259580000 0 0 0 4653900 7625000 27195000 12959000 19427000 13592000 25652000 23117000 24555000 12122000 22436000 66249000 31531 4065 28778 265066;265067;265068;265069;265070;265071;265072;265073;265074;265075;265076;265077 210438;210439;210440;210441;210442;210443;210444;210445;210446;210447;210448;210449;210450;210451 210446 14 LPIGNTIQPSQAATFMNDAIEK Oxidation (M) 2374.1839 0.18386096 323 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 79.079 79.096 3 4.9238E-09 91895 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 53.454 48.362 43217000 0 0 0 0 5426500 8422800 0 0 0 11848000 10651000 0 6867800 0 0 31532 323 28779 265078;265079;265080;265081;265082 210452;210453;210454;210455 210455 411 2 LPIGNTIQPSQAATFMNDAIEK Unmodified 2358.1889 0.18894634 323 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 88.304 88.452 3 6.731E-05 102420 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.011 40.743 16916000 0 0 0 0 0 0 0 0 0 4137500 2766500 2632900 0 0 7379500 31533 323 28779 265083;265084;265085;265086 210456;210457 210457 2 LPILNQPSTQIVANAK Unmodified 1705.9727 0.97266962 4020 Q99541 PLIN2 Perilipin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.536 76.594 2 7.4935E-98 87921 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 193.23 178.99 197080000 0 0 0 7430300 14250000 16633000 14155000 18300000 13873000 20915000 16983000 27569000 16807000 13581000 16584000 31534 4020 28780 265087;265088;265089;265090;265091;265092;265093;265094;265095;265096;265097;265098 210458;210459;210460;210461;210462;210463;210464;210465;210466;210467;210468;210469;210470 210461 13 LPILPSK Unmodified 766.49528 0.49527576 1462 P42684 ABL2 Abelson tyrosine-protein kinase 2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 54.18 54 2 0.023929 61095 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 94.407 10.793 50616000 0 0 0 0 20994000 0 0 29622000 0 0 0 0 0 0 0 31535 1462 28781 265099;265100 210471;210472;210473 210472 3 LPINHQIIYQLQDVFNLLPDVSLQEFVK Unmodified 3322.7965 0.79654974 1668 P51665 PSMD7 26S proteasome non-ATPase regulatory subunit 7 yes yes 0 0 0 By MS/MS 3 0 1 1 103.26 99.636 3 0.042107 119851 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 16.801 7.0042 987200 0 987200 0 0 0 0 0 0 0 0 0 0 0 0 0 31536 1668 28782 265101 210474 210474 1 LPIPMIAK Unmodified 881.54085 0.54084574 3859 Q96GX5 MASTL Serine/threonine-protein kinase greatwall yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 76.353 76.443 2 0.030584 88327 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 55.441 14.521 44347000 0 0 0 0 3256200 4046200 2979200 4623100 2728200 4358700 5370100 6380600 5596000 5008500 0 31537 3859 28783 265102;265103;265104;265105;265106;265107;265108;265109;265110;265111 210475;210476;210477;210478;210479;210480;210481 210475 7 LPISASHSSK Unmodified 1025.5506 0.55055881 1707 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 15.496 15.667 2 0.002198 14324 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.676 35.556 95874000 0 0 0 3255800 2911500 3751700 5416200 4596500 0 9691700 11915000 13876000 14173000 11402000 14885000 31538 1707 28784 265112;265113;265114;265115;265116;265117;265118;265119;265120;265121;265122 210482;210483;210484;210485;210486 210482 5 LPISDSPPDTQEIHVIEQEK Unmodified 2274.138 0.13795663 3601 Q8WYP5 AHCTF1 Protein ELYS yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 74.626 74.659 3 5.7902E-06 86178 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 56.529 42.657 69047000 0 0 0 0 8409600 11054000 0 0 11675000 17065000 11131000 0 9712800 0 0 31539 3601 28785 265123;265124;265125;265126;265127;265128;265129 210487;210488;210489;210490;210491;210492;210493;210494 210489 8 LPISLTNTDLK Unmodified 1213.6918 0.69180331 5124 Q9Y2X0 MED16 Mediator of RNA polymerase II transcription subunit 16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.42 1.93 1 11 1 1 1 1 1 1 1 1 1 1 1 1 75.049 74.821 2 5.7562E-05 86253 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 114.4 73.372 101790000 0 5044400 0 4980700 6590200 8770700 7020500 9159500 6081700 0 9004200 15064000 8435600 8962900 12672000 31540 5124 28786 265130;265131;265132;265133;265134;265135;265136;265137;265138;265139;265140;265141 210495;210496;210497;210498;210499;210500;210501;210502;210503;210504;210505 210503 11 LPIVNEDDELVAIIARTDLK Unmodified 2236.2315 0.23146308 964 P12268 IMPDH2 Inosine-5'-monophosphate dehydrogenase 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 98.47 94.046 3 3.322E-119 117077 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 194.92 173.97 463550000 446670000 14215000 2666000 0 0 0 0 0 0 0 0 0 0 0 0 31541 964 28787 265142;265143;265144;265145;265146 210506;210507;210508;210509;210510;210511;210512;210513;210514 210509 9 LPLAAQGK Unmodified 796.48069 0.48068833 2112 Q05086 UBE3A Ubiquitin-protein ligase E3A yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 30.574 26.179 2 0.017856 32816 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 89.673 46.673 102170000 0 102170000 0 0 0 0 0 0 0 0 0 0 0 0 0 31542 2112 28788 265147;265148 210515;210516;210517 210517 3 LPLATIVK Unmodified 853.56369 0.56368968 583 O94776 MTA2 Metastasis-associated protein MTA2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.507 67.589 2 0.013906 76233 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.342 49.796 323060000 0 0 0 27446000 20687000 31887000 26311000 23130000 17823000 33645000 30619000 32677000 25128000 20632000 33076000 31543 583 28789 265149;265150;265151;265152;265153;265154;265155;265156;265157;265158;265159;265160 210518;210519;210520;210521;210522;210523;210524;210525;210526;210527 210520 10 LPLDFANTPSR Unmodified 1229.6404 0.64043645 2970 Q6T4R5 NHS Nance-Horan syndrome protein yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 70.157 70.234 2 0.0070389 81019 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 57.785 36.915 37366000 0 0 0 2153800 2906800 0 3639800 2757300 0 4293000 5610200 5645600 3236900 2410600 4712000 31544 2970 28790 265161;265162;265163;265164;265165;265166;265167;265168;265169;265170 210528;210529;210530 210530 3 LPLDVLGR Unmodified 881.53345 0.53345218 4836 Q9UBC2 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 74.7 74.819 2 0.0068946 86266 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 91.906 31.118 108670000 0 0 0 0 5407200 9322900 7625700 6711500 8486300 8813200 9986100 13796000 9494500 8858200 20169000 31545 4836 28791 265171;265172;265173;265174;265175;265176;265177;265178;265179;265180;265181 210531;210532;210533;210534;210535;210536;210537;210538;210539;210540 210537 10 LPLEDADIIK Unmodified 1125.6281 0.62814043 3947 Q96PE2 ARHGEF17 Rho guanine nucleotide exchange factor 17 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 79.301 74.565 2 0.015808 92843 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.016 33.927 35037000 0 35037000 0 0 0 0 0 0 0 0 0 0 0 0 0 31546 3947 28792 265182;265183 210541;210542 210541 2 LPLENGR Unmodified 797.43955 0.43955179 23 A6NDG6 PGP Phosphoglycolate phosphatase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 25.771 25.981 2 0.040686 27027 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 68.485 12.98 97693000 0 0 0 5091100 3955100 8293000 4990600 0 4307700 0 10537000 12164000 6073700 11488000 30793000 31547 23 28793 265184;265185;265186;265187;265188;265189;265190;265191;265192;265193 210543 210543 1 LPLFDSVR Unmodified 945.52837 0.5283668 3315 Q8N201 INTS1 Integrator complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 74.069 74.093 2 0.017693 85315 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 65.252 26.46 72321000 0 0 0 7091600 6073000 7663600 0 7851400 4846300 8136600 5905800 9300700 6690300 8761200 0 31548 3315 28794 265194;265195;265196;265197;265198;265199;265200;265201;265202;265203 210544;210545;210546;210547;210548;210549;210550;210551;210552;210553 210548 10 LPLFGLGR Unmodified 871.52797 0.52797287 2002 P82930 MRPS34 28S ribosomal protein S34, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 81.495 81.525 2 0.035132 93967 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 52.683 17.791 20873000 0 0 0 1773900 1213100 4208400 2076300 2031200 1965800 0 2585400 0 2528600 2489800 0 31549 2002 28795 265204;265205;265206;265207;265208;265209;265210;265211;265212 210554 210554 1 LPLGTLSK Unmodified 827.51165 0.5116541 296 O43148 RNMT mRNA cap guanine-N7 methyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 50.066 50.22 2 0.008471 55570 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.095 20.419 53947000 0 0 0 0 6640700 0 7452500 0 0 0 0 0 8243100 10911000 20699000 31550 296 28796 265213;265214;265215;265216;265217 210555;210556;210557 210555 3 LPLISGFYK Unmodified 1036.5957 0.59571809 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 82.446 82.544 2 0.0077875 95129 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.501 66.27 30621000 0 0 0 0 1581300 2520800 1371300 3076500 0 2651100 1515700 2671900 0 4836200 10396000 31551 1986 28797 265218;265219;265220;265221;265222;265223;265224;265225;265226 210558 210558 1 LPLLLPR Unmodified 820.55346 0.55345934 1536 P48382 RFX5 DNA-binding protein RFX5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.646 78.704 2 0.023434 90514 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 85.306 31.785 171280000 0 0 0 7168100 11816000 11358000 13063000 16181000 13301000 13842000 14602000 19089000 15875000 13456000 21529000 31552 1536 28798 265227;265228;265229;265230;265231;265232;265233;265234;265235;265236;265237;265238 210559;210560;210561;210562;210563;210564;210565;210566;210567;210568 210562 10 LPLLLSR Unmodified 810.53272 0.5327239 1609 P49902 NT5C2 Cytosolic purine 5'-nucleotidase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 73.317 73.363 2 0.023527 84367 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 92.467 18.028 105100000 0 0 0 9061400 6072000 0 8172600 10556000 7945000 14026000 14418000 12313000 11166000 11366000 0 31553 1609 28799 265239;265240;265241;265242;265243;265244;265245;265246;265247;265248 210569;210570 210569 2 LPLLPHEVR Unmodified 1072.6393 0.63931423 353 O43681 ASNA1 ATPase ASNA1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 58.156 58.308 2 0.005606 66021 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 77.282 52.36 82953000 0 0 0 0 3187400 11528000 5883200 7779900 5506900 0 11282000 0 12060000 8118000 17607000 31554 353 28800 265249;265250;265251;265252;265253;265254;265255;265256;265257 210571;210572;210573;210574;210575;210576;210577;210578;210579 210574 9 LPLMECVQMTK Unmodified 1348.6553 0.65529993 1063 P17858 PFKL ATP-dependent 6-phosphofructokinase, liver type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 74.759 74.83 2 0.00039146 86168 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 86.898 73.942 83885000 0 0 0 0 7342200 10304000 6343700 16861000 8113400 11842000 0 23079000 0 0 0 31555 1063 28801 265258;265259;265260;265261;265262;265263;265264;265265;265266 210580;210581;210582;210583;210584;210585;210586;210587;210588 210584 9 LPLMECVQMTK Oxidation (M) 1364.6502 0.65021455 1063 P17858 PFKL ATP-dependent 6-phosphofructokinase, liver type yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 2 1 2 2 1 2 1 2 1 2 2 61.901 62.054 2 0.001133 68588 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.03 57.036 177950000 0 0 0 11863000 0 6010800 12689000 15358000 5016500 24036000 5675800 33477000 5271200 26884000 31667000 31556 1063 28801 265267;265268;265269;265270;265271;265272;265273;265274;265275;265276;265277;265278;265279;265280;265281;265282;265283;265284 210589;210590;210591;210592;210593;210594;210595 210590 1495;1496 2 LPLMECVQMTK 2 Oxidation (M) 1380.6451 0.64512917 1063 P17858 PFKL ATP-dependent 6-phosphofructokinase, liver type yes yes 0 2 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 2 1 1 1 1 2 46.081 46.422 2 0.0028628 51843 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.327 35.577 107680000 0 0 0 0 0 0 9936800 18903000 0 13816000 3463100 0 0 14601000 46965000 31557 1063 28801 265285;265286;265287;265288;265289;265290;265291;265292;265293 210596;210597;210598 210598 1495;1496 3 LPLMECVQMTQDVQK Oxidation (M) 1834.8627 0.86272652 2064 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 26 1 3 1 2 2 3 2 2 3 3 2 2 69.826 69.954 2;3 1.0448E-35 79020 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 156.36 138.55 139580000 0 0 0 4761100 10344000 5069000 7004400 9646700 14382000 5416000 12782000 26880000 15099000 12892000 15307000 31558 2064 28802 265294;265295;265296;265297;265298;265299;265300;265301;265302;265303;265304;265305;265306;265307;265308;265309;265310;265311;265312;265313;265314;265315;265316;265317;265318;265319 210599;210600;210601;210602;210603;210604;210605;210606;210607;210608;210609;210610;210611;210612;210613;210614;210615;210616;210617;210618 210614 3351;3352 18 LPLMECVQMTQDVQK Unmodified 1818.8678 0.8678119 2064 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 78.323 78.427 2 7.7373E-84 90201 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 226.73 212.93 93689000 0 0 0 0 6585700 6577100 2136400 8812100 5039500 8741900 9835900 8625600 5519000 10569000 21247000 31559 2064 28802 265320;265321;265322;265323;265324;265325;265326;265327;265328;265329;265330 210619;210620;210621;210622;210623;210624;210625;210626 210621 8 LPLMECVQMTQDVQK 2 Oxidation (M) 1850.8576 0.85764114 2064 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type yes yes 0 2 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 2 2 2 1 1 1 2 3 2 1 1 55.511 55.718 2;3 1.9482E-23 63621 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 121.02 98.993 128600000 0 0 0 0 10136000 6804300 8280300 4142600 3584300 7376600 15270000 42805000 14293000 9705000 6208500 31560 2064 28802 265331;265332;265333;265334;265335;265336;265337;265338;265339;265340;265341;265342;265343;265344;265345;265346;265347;265348 210627;210628;210629;210630;210631;210632;210633;210634;210635;210636;210637 210635 3351;3352 10 LPLMECVQVTK Oxidation (M) 1332.6781 0.67814386 861 P08237 PFKM ATP-dependent 6-phosphofructokinase, muscle type yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 2 2 2 1 2 2 1 2 2 2 2 58.13 58.267 2 7.138E-05 64981 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 110.46 70.39 421380000 0 0 0 8084900 26504000 43460000 25465000 7871000 36030000 50632000 14872000 83302000 51222000 26926000 47016000 31561 861 28803 265349;265350;265351;265352;265353;265354;265355;265356;265357;265358;265359;265360;265361;265362;265363;265364;265365;265366;265367;265368;265369 210638;210639;210640;210641;210642;210643;210644;210645;210646;210647;210648;210649;210650;210651;210652;210653;210654;210655;210656;210657;210658;210659;210660;210661 210657 1089 23 LPLMECVQVTK Unmodified 1316.6832 0.68322924 861 P08237 PFKM ATP-dependent 6-phosphofructokinase, muscle type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 73.507 73.514 2 0.0056234 84485 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 58.592 36.506 176240000 0 0 0 32490000 0 0 36583000 47813000 0 0 59354000 0 0 0 0 31562 861 28803 265370;265371;265372;265373 210662;210663;210664 210662 3 LPLPEPWR Unmodified 1006.56 0.56000128 4493 Q9HB07 C12orf10 UPF0160 protein MYG1, mitochondrial yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 79.049 79.115 2 0.010604 90919 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.116 24.591 36230000 0 0 0 909790 0 0 0 0 0 2147500 4938000 8085100 0 3195200 16955000 31563 4493 28804 265374;265375;265376;265377;265378;265379 210665;210666;210667;210668 210665 4 LPLPSPALEYTLGSR Unmodified 1612.8825 0.88245763 3213 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 87.261 87.331 2 2.0398E-19 101422 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 118.48 118 108740000 0 0 0 1384100 7434800 10650000 6754000 8292800 8461100 12863000 11205000 1908200 7342500 8879900 23560000 31564 3213 28805 265380;265381;265382;265383;265384;265385;265386;265387;265388;265389;265390;265391 210669;210670;210671;210672;210673;210674;210675;210676 210670 7 LPLPYGFSAMQGWR Oxidation (M) 1637.8024 0.80243317 275 O15355 PPM1G Protein phosphatase 1G yes yes 0 1 0 By MS/MS 10 0 1 1 85.732 85.9 2 0.0020644 99269 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.981 36.404 4836400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4836400 31565 275 28806 265392 210677 210677 362 1 LPLQDVYK Unmodified 974.54368 0.54368251 1960 P68104;Q5VTE0;Q05639 EEF1A1;EEF1A1P5;EEF1A2 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 2 yes no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 22 2 2 1 2 2 2 2 2 1 2 2 2 57.502 57.606 1;2 3.8317E-17 65526 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 173.28 60.149 13982000000 0 0 0 903750000 1149500000 16809000 1190100000 1012100000 731470000 1848300000 1857200000 27493000 1650800000 1517100000 2077200000 31566 1960 28807 265393;265394;265395;265396;265397;265398;265399;265400;265401;265402;265403;265404;265405;265406;265407;265408;265409;265410;265411;265412;265413;265414 210678;210679;210680;210681;210682;210683;210684;210685;210686;210687;210688;210689;210690;210691;210692;210693;210694;210695;210696;210697;210698;210699 210680 21 LPLQESEEEEREER Unmodified 1771.8224 0.82243615 1161 P23497 SP100 Nuclear autoantigen Sp-100 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 34.638 34.832 3 0.024648 38470 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 30.961 20.347 18737000 0 0 0 0 1807400 0 0 1909300 0 0 0 0 7146100 0 7873800 31567 1161 28808 265415;265416;265417;265418;265419 210700;210701;210702 210701 3 LPLQLDDAVRPEAEGEEEGR Unmodified 2222.0815 0.081504383 1009 P14868 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 72.573 72.695 3 3.077E-22 83691 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 98.035 79.497 73039000 0 0 0 0 3884800 8640500 0 3971900 5169200 9049000 6611200 10976000 4379900 0 20357000 31568 1009 28809 265420;265421;265422;265423;265424;265425;265426;265427;265428;265429;265430 210703;210704;210705;210706;210707;210708;210709;210710;210711;210712;210713;210714;210715;210716 210705 14 LPLQLDDAVRPEAEGEEEGRATVNQDTR Unmodified 3107.5119 0.51194805 1009 P14868 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 0 0 2 By matching By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 70.814 71.011 4 4.0925E-21 81104 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.231 58.52 31141000 0 0 0 0 0 3589000 0 0 0 5313500 6078000 0 0 0 16161000 31569 1009 28810 265431;265432;265433;265434 210717;210718 210718 2 LPLQQCCVK Unmodified 1144.5733 0.57328486 2781 Q5T749 KPRP Keratinocyte proline-rich protein yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 39.332 39.116 2 0.005234 44054 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 79.451 64.782 11332000 0 0 0 10095000 0 0 1237100 0 0 0 0 0 0 0 0 31570 2781 28811 265435;265436 210719 210719 1 LPLSLLK Unmodified 782.52658 0.52657589 5214 Q9Y4Z0 LSM4 U6 snRNA-associated Sm-like protein LSm4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.324 74.387 2 0.023384 84951 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.029 6.6476 210280000 0 0 0 16185000 16601000 14149000 42036000 11387000 13914000 15105000 20312000 20690000 14946000 10978000 13973000 31571 5214 28812 265437;265438;265439;265440;265441;265442;265443;265444;265445;265446;265447;265448 210720;210721;210722;210723;210724;210725 210721 6 LPLSPPLVEDSAFEPSRK Unmodified 1981.052 0.052042156 713 O96007 MOCS2 Molybdopterin synthase catalytic subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.71 3.73 2 2 3 2 1 1 1 1 1 83.647 81.227 3 2.203E-36 103356 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 128.59 125.2 132500000 77428000 3380400 12488000 0 0 0 0 0 6406300 0 0 0 0 9145000 23653000 31572 713 28813 265449;265450;265451;265452;265453;265454;265455 210726;210727;210728;210729;210730;210731 210728 6 LPLSPSLLVK Unmodified 1065.6798 0.67978207 178 O00750 PIK3C2B Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.884 81.945 2 0.0051146 94399 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.256 62.776 44450000 0 0 0 2005600 2344800 4961600 2699700 3322900 1560200 5594500 3622800 4935800 2539000 4174400 6688700 31573 178 28814 265456;265457;265458;265459;265460;265461;265462;265463;265464;265465;265466;265467 210732;210733;210734;210735;210736;210737;210738;210739;210740;210741 210735 10 LPLTLVPGER Unmodified 1093.6495 0.64954457 2895 Q6N069 NAA16 N-alpha-acetyltransferase 16, NatA auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 75.548 75.636 2 0.0018002 87165 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 101.64 58.425 31586000 0 0 0 0 2419600 0 3918000 4239800 0 6598100 8056000 6354100 0 0 0 31574 2895 28815 265468;265469;265470;265471;265472;265473 210742;210743;210744;210745;210746;210747 210746 6 LPLVPESPR Unmodified 1006.5811 0.58113065 3182 Q86WB0 ZC3HC1 Nuclear-interacting partner of ALK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 60.341 60.562 2 0.012702 69002 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 60.91 28.3 30109000 0 0 0 0 0 4243900 3844300 2504500 2205100 4700200 4913000 0 0 2497400 5200300 31575 3182 28816 265474;265475;265476;265477;265478;265479;265480;265481 210748;210749;210750;210751;210752 210751 5 LPLVPESPRR Unmodified 1162.6822 0.68224168 3182 Q86WB0 ZC3HC1 Nuclear-interacting partner of ALK yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 49.002 49.17 3 0.0026114 55264 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 49.189 43.188 147090000 0 0 0 9549800 4394900 17148000 0 7859300 0 16933000 22850000 18488000 18289000 12942000 18634000 31576 3182 28817 265482;265483;265484;265485;265486;265487;265488;265489;265490;265491 210753;210754;210755;210756;210757;210758;210759 210756 6 LPLVTPHTQCR Unmodified 1320.6972 0.69723982 1875 P62191 PSMC1 26S protease regulatory subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.778 42.953 3 1.0423E-05 47628 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 125.74 114.53 446110000 0 0 0 28574000 29272000 28827000 7880300 11510000 11495000 40994000 66538000 140790000 22020000 20987000 37224000 31577 1875 28818 265492;265493;265494;265495;265496;265497;265498;265499;265500;265501;265502;265503 210760;210761;210762;210763;210764;210765;210766;210767;210768;210769;210770;210771;210772 210766 13 LPMGSIK Oxidation (M) 760.41531 0.41531088 188 O14562 UBFD1 Ubiquitin domain-containing protein UBFD1 yes yes 0 1 0 By MS/MS By MS/MS 3 0 2 1 1 26.039 21.584 2 0.049834 26924 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 73.975 21.744 46356000 3384600 42972000 0 0 0 0 0 0 0 0 0 0 0 0 0 31578 188 28819 265504;265505 210773 210773 1 LPMNLLPK Unmodified 924.54666 0.5466594 3893 Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 76.208 75.492 2 0.011473 86313 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 76.847 28.673 46249000 6962700 0 0 3107900 3794600 3669100 2447600 3751200 0 4760800 5108500 4988500 3283600 4374400 0 31579 3893 28820 265506;265507;265508;265509;265510;265511;265512;265513;265514;265515;265516 210774;210775;210776;210777;210778;210779;210780;210781;210782;210783;210784 210780 11 LPMNLLPK Oxidation (M) 940.54157 0.54157402 3893 Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.869 60.974 2 0.015078 70497 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 60.788 19.286 50510000 0 0 0 3721100 2861000 3265700 4057500 4508100 2216400 5338500 4472800 5585100 5043100 3582700 5858500 31580 3893 28820 265517;265518;265519;265520;265521;265522;265523;265524;265525;265526;265527;265528 210785;210786;210787;210788 210788 5394 4 LPNFGFVVFDDSEPVQK Unmodified 1936.9571 0.95707914 2263 Q13283 G3BP1 Ras GTPase-activating protein-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.53 2.94 1 2 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 94.047 93.129 2;3 4.7001E-35 115500 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 163.33 149.37 119690000 23248000 8975400 0 3306700 4868900 5613400 4210600 6019800 7324300 18844000 9568300 6188800 1887900 4170100 15463000 31581 2263 28821 265529;265530;265531;265532;265533;265534;265535;265536;265537;265538;265539;265540;265541;265542;265543 210789;210790;210791;210792;210793;210794;210795;210796 210792 8 LPNFGFVVFDDSEPVQR Unmodified 1964.9632 0.96322715 5028 Q9UN86 G3BP2 Ras GTPase-activating protein-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 4 1 2 1 93.851 93.946 2 0.0005312 109032 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.479 63.118 4708800 0 0 0 0 0 1516600 0 0 0 1652400 0 0 0 0 1539800 31582 5028 28822 265544;265545;265546;265547 210797;210798;210799 210799 3 LPNFLSVEPR Unmodified 1170.6397 0.63970816 3560 Q8WVC0 LEO1 RNA polymerase-associated protein LEO1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 81.147 81.199 2 0.0026033 94152 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 81.95 58.182 174580000 0 0 0 6006600 6929500 0 11565000 0 8272300 13812000 18442000 24205000 17696000 23000000 44655000 31583 3560 28823 265548;265549;265550;265551;265552;265553;265554;265555;265556;265557 210800;210801;210802;210803;210804;210805;210806;210807;210808;210809 210807 10 LPNGALQNR Unmodified 981.53558 0.53557744 2164 Q08AD1 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 27.09 27.191 2 0.0052447 29304 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 79.116 47.827 48672000 0 0 0 7266800 5276700 6090600 0 0 4037100 7444700 7065200 0 5561700 5928600 0 31584 2164 28824 265558;265559;265560;265561;265562;265563;265564;265565 210810;210811;210812;210813 210813 4 LPNGVFTPDFQEFVNK Unmodified 1850.9203 0.9202997 1373 P36507 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 91.418 89.658 2 5.8645E-52 112012 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 166.62 155.41 108360000 26356000 54375000 0 0 0 5551200 0 0 4427100 1336500 9467200 6844100 0 0 0 31585 1373 28825 265566;265567;265568;265569;265570;265571;265572 210814;210815;210816;210817;210818;210819 210815 6 LPNLECIQNANK Unmodified 1412.7082 0.70819844 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.53 2.94 1 2 12 3 1 1 1 1 1 1 1 1 1 1 1 1 64.711 63.77 2 7.6042E-24 80718 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 167.09 128.09 173520000 0 72452000 0 4908000 4034700 9164800 4293200 5238500 5344500 11236000 9741700 12253000 11122000 11114000 12621000 31586 619 28826 265573;265574;265575;265576;265577;265578;265579;265580;265581;265582;265583;265584;265585;265586;265587 210820;210821;210822;210823;210824;210825;210826;210827;210828;210829;210830;210831;210832;210833;210834;210835;210836 210824 16 LPNLTHLNLSGNK Unmodified 1419.7834 0.78341229 3651 Q92688 ANP32B Acidic leucine-rich nuclear phosphoprotein 32 family member B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 2 24 1 1 2 2 2 2 2 2 2 2 2 2 2 2 70.022 69.597 2;3 1.2635E-28 79545 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 150.51 131.9 924020000 33133000 28362000 0 22738000 23706000 72612000 38341000 53224000 51533000 51657000 88190000 115170000 74597000 89101000 181660000 31587 3651 28827 265588;265589;265590;265591;265592;265593;265594;265595;265596;265597;265598;265599;265600;265601;265602;265603;265604;265605;265606;265607;265608;265609;265610;265611;265612;265613 210837;210838;210839;210840;210841;210842;210843;210844;210845;210846;210847;210848;210849;210850;210851;210852;210853;210854;210855;210856;210857;210858;210859;210860;210861;210862;210863;210864;210865;210866;210867;210868 210866 27 LPNSDFSQATPNQQTYANSEVDK Unmodified 2553.1619 0.16193955 3436 Q8NEZ4 KMT2C Histone-lysine N-methyltransferase 2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 59.37 59.208 3 0.0043033 66797 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 26.417 18.129 22768000 0 0 0 3390300 3048400 6362700 0 4080000 0 0 0 0 0 5886500 0 31588 3436 28828 265614;265615;265616;265617;265618 210869 210869 1 LPNSVLGK Unmodified 826.49125 0.49125301 4357 Q9H223 EHD4 EH domain-containing protein 4 no no 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 43.472 38.358 2 0.0040822 47954 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 148.33 54.734 323370000 159910000 149560000 13903000 0 0 0 0 0 0 0 0 0 0 0 0 31589 4357 28829 265619;265620;265621;265622 210870;210871 210871 1 LPNSVLGR Unmodified 854.4974 0.49740102 4777 Q9NZN4 EHD2 EH domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.83 42.006 2 0.011784 46867 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 76.134 4.8769 295300000 0 0 0 15968000 14125000 31881000 22964000 17510000 15686000 34736000 29103000 35684000 25301000 21101000 31241000 31590 4777 28830 265623;265624;265625;265626;265627;265628;265629;265630;265631;265632;265633;265634 210872;210873;210874;210875;210876;210877;210878 210873 7 LPNTVLGK Unmodified 840.5069 0.50690308 4403 Q9H4M9 EHD1 EH domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8 3.33 2 2 11 2 1 1 1 1 1 1 1 1 1 1 1 1 1 42.137 40.827 2 0.0025516 50381 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 120.92 17.904 440390000 229490000 26756000 5267300 12074000 9336200 22181000 15698000 12702000 10376000 20204000 18833000 16437000 0 16018000 25021000 31591 4403 28831 265635;265636;265637;265638;265639;265640;265641;265642;265643;265644;265645;265646;265647;265648;265649 210879;210880;210881;210882;210883;210884;210885 210881 7 LPNYEEK Unmodified 891.4338 0.43379771 4177 Q9BV57 ADI1 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase yes yes 0 0 0 By MS/MS 2 0 1 1 27.556 23.251 2 0.031783 30856 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.029 18.645 417960000 0 417960000 0 0 0 0 0 0 0 0 0 0 0 0 0 31592 4177 28832 265650 210886 210886 1 LPNYFVRPDLGPK Unmodified 1514.8245 0.82454882 5193 Q9Y4C1 KDM3A Lysine-specific demethylase 3A yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.045 75.104 3 0.00038686 86142 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.496 59.729 72284000 0 0 0 2377100 2744400 9752100 3445900 4933500 5820800 5208400 5759300 7612300 4572000 4504900 15553000 31593 5193 28833 265651;265652;265653;265654;265655;265656;265657;265658;265659;265660;265661;265662 210887;210888;210889;210890;210891;210892;210893;210894;210895;210896;210897 210890 11 LPPAAGDEPPDPNLFIEPITEER Unmodified 2516.2435 0.24348433 4517 Q9HCK8 CHD8 Chromodomain-helicase-DNA-binding protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 2 2 1 1 2 89.887 90.002 2;3 1.4241E-13 104305 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.771 70.009 26377000 0 0 0 0 2236200 1702500 0 1409600 1372800 5404800 3293100 2923000 0 1564500 6470200 31594 4517 28834 265663;265664;265665;265666;265667;265668;265669;265670;265671;265672;265673;265674 210898;210899;210900;210901;210902;210903;210904;210905;210906;210907;210908;210909;210910 210902 13 LPPEDLVQTR Unmodified 1166.6295 0.62953741 2351 Q13887 KLF5 Krueppel-like factor 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 55.058 54.884 2 0.016408 61885 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 49.554 38.333 44772000 0 0 0 8750300 7498900 9701500 10372000 8449000 0 0 0 0 0 0 0 31595 2351 28835 265675;265676;265677;265678;265679 210911;210912;210913 210911 3 LPPEEASPYVVDHGESGPLR Unmodified 2148.0487 0.048747692 1729 P53992 SEC24C Protein transport protein Sec24C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 64.697 64.752 3 0.00011225 73992 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 50.397 41.301 61381000 0 0 0 4758000 2491900 6134600 4645500 4195200 3057400 8671000 4500900 0 4102400 9003200 9821000 31596 1729 28836 265680;265681;265682;265683;265684;265685;265686;265687;265688;265689;265690 210914;210915;210916;210917;210918;210919;210920;210921;210922;210923;210924;210925;210926 210914 13 LPPGEYILVPSTFEPNK Unmodified 1899.9982 0.99821567 1057 P17655 CAPN2 Calpain-2 catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.76 3 1 23 1 2 1 1 2 2 2 2 2 2 2 2 2 2 2 88.251 87.633 2;3 4.323E-05 104918 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 73.208 62.55 245960000 8800500 87195000 4263400 1108000 4710700 16904000 5466500 7890400 8193400 22056000 14052000 12409000 7970000 9889900 35054000 31597 1057 28837 265691;265692;265693;265694;265695;265696;265697;265698;265699;265700;265701;265702;265703;265704;265705;265706;265707;265708;265709;265710;265711;265712;265713;265714;265715;265716;265717 210927;210928;210929;210930;210931;210932;210933;210934;210935;210936;210937;210938;210939;210940;210941;210942;210943 210933 16 LPPGEYVVVPSTFEPNK Unmodified 1871.9669 0.96691554 841 P07384 CAPN1 Calpain-1 catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 82.204 82.16 2 0.014493 95077 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 45.077 20.734 11358000 0 0 0 1299500 1493000 0 3217000 2735100 0 0 0 0 2613000 0 0 31598 841 28838 265718;265719;265720;265721;265722 210944;210945;210946 210945 3 LPPGFSASSTVEK Unmodified 1318.6769 0.67688153 533 O75694 NUP155 Nuclear pore complex protein Nup155 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 52.232 52.499 2 0.002986 58412 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 55.98 34.283 129030000 0 0 0 0 0 0 9593500 9108500 9542500 36385000 20659000 0 0 14335000 29403000 31599 533 28839 265723;265724;265725;265726;265727;265728;265729 210947;210948;210949;210950;210951;210952;210953;210954;210955;210956 210956 10 LPPGFSASSTVEKPSK Unmodified 1630.8566 0.85663681 533 O75694 NUP155 Nuclear pore complex protein Nup155 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 48.133 48.348 3 0.011203 53611 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 21 8.3736 25241000 0 0 0 3850200 0 0 0 5986000 0 0 4227500 8570600 2606200 0 0 31600 533 28840 265730;265731;265732;265733;265734 210957 210957 1 LPPGGPLLPSASLTR Unmodified 1474.8508 0.85076357 2976 Q6UUV9 CRTC1 CREB-regulated transcription coactivator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.983 80.03 2 1.2363E-05 92092 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.693 54.838 61061000 0 0 0 2856300 2330600 3209500 4663300 0 4394600 7393500 6818500 6858000 4458200 5880200 12198000 31601 2976 28841 265735;265736;265737;265738;265739;265740;265741;265742;265743;265744;265745 210958;210959;210960;210961;210962;210963;210964;210965;210966;210967;210968;210969;210970 210962 13 LPPGWEK Unmodified 825.43849 0.43848916 2309 Q13526;O15428 PIN1;PIN1P1 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1;Putative PIN1-like protein yes no 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 41.232 36.771 2 0.035514 46178 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 84.244 66.682 267490000 0 216100000 51391000 0 0 0 0 0 0 0 0 0 0 0 0 31602 2309 28842 265746;265747;265748 210971;210972 210972 2 LPPHGYPLEHPFNK Unmodified 1644.8413 0.84126152 4846 Q9UBL3 ASH2L Set1/Ash2 histone methyltransferase complex subunit ASH2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 54.37 54.67 4 0.049191 61465 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 25.322 18.282 89844000 0 0 0 0 0 9158100 4568100 5610800 6125900 0 12473000 11038000 14695000 0 26175000 31603 4846 28843 265749;265750;265751;265752;265753;265754;265755;265756 210973 210973 1 LPPNTNDEVDEDPTGNK Unmodified 1853.8279 0.82791546 2528 Q15393 SF3B3 Splicing factor 3B subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.917 38.097 2 1.2444E-95 42119 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 232.37 232.37 556790000 0 0 0 24601000 31197000 33388000 32788000 40812000 22744000 46450000 56564000 68845000 63206000 53948000 82251000 31604 2528 28844 265757;265758;265759;265760;265761;265762;265763;265764;265765;265766;265767;265768 210974;210975;210976;210977;210978;210979;210980;210981;210982;210983;210984;210985;210986;210987;210988;210989;210990;210991;210992;210993;210994;210995;210996;210997 210994 24 LPPNYSMHSAEK Oxidation (M) 1388.6395 0.63945017 3439 Q8NF50 DOCK8 Dedicator of cytokinesis protein 8 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 63.15 56.073 2 0.015708 75903 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.563 10.405 26550000 8614800 17936000 0 0 0 0 0 0 0 0 0 0 0 0 0 31605 3439 28845 265769;265770 210998 210998 4977 1 LPPQNFVNFR Unmodified 1230.6509 0.65094155 2861 Q68EM7 ARHGAP17 Rho GTPase-activating protein 17 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 74.325 74.518 2 0.026971 85312 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.117 32.162 25879000 0 0 0 0 0 0 2648400 0 2732600 5144900 0 6273000 0 2978600 6101900 31606 2861 28846 265771;265772;265773;265774;265775;265776 210999 210999 1 LPPQTLEGDPGAEGEEGTTTVRK Unmodified 2381.171 0.17104767 3047 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme yes yes 0 0 1 By MS/MS 10 0 1 1 48.827 49.147 3 0.0087094 55648 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 22.361 7.1064 17699000 0 0 0 0 0 0 0 0 0 0 0 0 17699000 0 0 31607 3047 28847 265777 211000 211000 1 LPPQVPAQVPSQDPFGLAPAYPLEPR Unmodified 2783.4647 0.46465092 202 O14686 KMT2D Histone-lysine N-methyltransferase 2D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 92.73 92.883 3 0.017288 107910 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 19.492 16.984 6149500 0 0 0 0 0 0 0 0 0 2378100 1445900 0 0 0 2325500 31608 202 28848 265778;265779;265780 211001;211002 211001 2 LPPSFPGNK Unmodified 955.51272 0.51271674 4423 Q9H6S3 EPS8L2 Epidermal growth factor receptor kinase substrate 8-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 48.593 42.452 2 0.0074429 58871 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.19 53.716 45273000 21025000 24247000 0 0 0 0 0 0 0 0 0 0 0 0 0 31609 4423 28849 265781;265782;265783 211003;211004;211005;211006;211007 211006 5 LPPTDAYYK Unmodified 1066.5335 0.53351176 2481 Q15029 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 46.949 41.738 2 0.0074475 54386 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.253 75.554 502020000 0 502020000 0 0 0 0 0 0 0 0 0 0 0 0 0 31610 2481 28850 265784;265785 211008;211009;211010 211008 3 LPPTPLLLFPEEEATNGR Unmodified 1993.052 0.052042156 5268 Q9Y679 AUP1 Ancient ubiquitous protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 2 2 2 2 2 2 94.154 94.26 2;3 2.1205E-11 109645 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 64.275 60.173 95585000 0 0 0 0 6554400 8086200 4779600 8872200 5091900 14379000 9835200 12099000 4827000 5954600 15107000 31611 5268 28851 265786;265787;265788;265789;265790;265791;265792;265793;265794;265795;265796;265797;265798;265799;265800;265801;265802;265803;265804;265805;265806;265807 211011;211012;211013;211014;211015;211016;211017;211018;211019;211020;211021;211022;211023;211024;211025;211026;211027;211028;211029;211030;211031;211032;211033;211034;211035;211036;211037 211015 26 LPPTSLKPDTFR Unmodified 1370.7558 0.75580056 4300 Q9GZQ3 COMMD5 COMM domain-containing protein 5 yes yes 0 0 1 By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 56.732 56.977 3 0.015895 63868 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.092 30.833 32974000 0 0 0 0 0 3967900 0 2179000 2588500 6572200 2998400 0 3347200 3960800 7359600 31612 4300 28852 265808;265809;265810;265811;265812;265813;265814;265815 211038 211038 1 LPPVLANLMGSMGAGK 2 Oxidation (M) 1586.816 0.81603433 3955 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes yes 0 2 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 78.928 79.068 2 0.00099628 91417 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 45.829 31.671 34335000 0 0 0 0 0 0 0 0 6643600 4160100 6216800 9578600 4484400 3251200 0 31613 3955 28853 265816;265817;265818;265819;265820;265821 211039;211040;211041 211039 5444;5445 2 LPPYDIPGMVSVVELK Unmodified 1755.9481 0.94809436 2184 Q12769 NUP160 Nuclear pore complex protein Nup160 yes yes 0 0 0 By MS/MS 2 0 1 1 97.873 93.1 2 0.017202 115299 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 43.613 29.95 21034000 0 21034000 0 0 0 0 0 0 0 0 0 0 0 0 0 31614 2184 28854 265822 211042 211042 1 LPPYDIPGMVSVVELK Oxidation (M) 1771.943 0.94300898 2184 Q12769 NUP160 Nuclear pore complex protein Nup160 yes yes 0 1 0 By MS/MS 10 0 1 1 86.335 86.539 2 0.018591 100410 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 44.765 30.607 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31615 2184 28854 265823 211043 211043 3555 1 LPQCLREEEEK Unmodified 1429.6871 0.68712864 3290 Q8IZ21 PHACTR4 Phosphatase and actin regulator 4 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 36.397 31.477 3 0.043364 39846 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 55.401 24.511 16968000 3986300 0 12981000 0 0 0 0 0 0 0 0 0 0 0 0 31616 3290 28855 265824;265825 211044 211044 0 LPQEFLQK Unmodified 1001.5546 0.55458155 2132 Q07002 CDK18 Cyclin-dependent kinase 18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 53.699 53.604 2 0.017656 60729 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 65.313 31.67 39321000 0 0 0 0 14202000 0 13798000 11321000 0 0 0 0 0 0 0 31617 2132 28856 265826;265827;265828 211045;211046;211047 211046 3 LPQFGISTPGSDLHVNAK Unmodified 1879.9792 0.97921156 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.26 76.318 3 2.2006E-05 87909 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 67.251 59.814 325460000 0 0 0 4159200 9966900 21572000 17190000 31436000 29843000 24929000 24893000 36508000 23395000 32255000 69318000 31618 2172 28857 265829;265830;265831;265832;265833;265834;265835;265836;265837;265838;265839;265840 211048;211049;211050;211051;211052;211053;211054;211055;211056;211057 211054 10 LPQGRPVPPLGPETR Unmodified 1612.9049 0.90492441 3187 Q86X10 RALGAPB Ral GTPase-activating protein subunit beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 54.648 54.733 3 0.00019194 61488 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 61.641 41.802 110240000 0 0 0 6817400 8191100 8651600 6916000 6782800 6141700 15757000 13622000 17312000 10972000 9080200 0 31619 3187 28858 265841;265842;265843;265844;265845;265846;265847;265848;265849;265850;265851 211058;211059;211060;211061;211062;211063;211064;211065;211066 211064 8 LPQGYHPNDVEEEWGK Unmodified 1896.8642 0.86424139 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS 2 0 1 1 62.58 58.817 3 0.0037455 73038 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 46.319 28.618 7709700 0 0 7709700 0 0 0 0 0 0 0 0 0 0 0 0 31620 5049 28859 265852 211067 211067 1 LPQLPITNFSR Unmodified 1284.719 0.71902112 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 83.304 83.367 2 0.0033079 96430 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 72.243 15.809 534050000 0 0 0 8381800 11227000 42611000 16104000 20412000 26872000 49124000 53508000 68633000 29291000 41884000 166010000 31621 1124 28860 265853;265854;265855;265856;265857;265858;265859;265860;265861;265862;265863;265864 211068;211069;211070;211071;211072;211073;211074;211075;211076;211077 211069 9 LPQMETEGMDEGK Unmodified 1463.6272 0.6272305 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching 8 3.46 1 3 1 1 1 1 48.736 47.572 2 9.4489E-05 59974 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.283 74.407 55653000 0 43698000 0 0 0 3736800 0 0 0 0 0 0 2292100 0 5926300 31622 2775 28861 265865;265866;265867;265868 211078;211079 211079 2 LPQMETEGMDEGK 2 Oxidation (M) 1495.6171 0.61705975 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 2 0 By MS/MS 2.5 0.5 1 1 2 19.743 16.07 2 0.019457 21154 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 55.754 52.776 8431600 0 8431600 0 0 0 0 0 0 0 0 0 0 0 0 0 31623 2775 28861 265869;265870 211080 211080 4409;4410 1 LPQMETEGMDEGK Oxidation (M) 1479.6221 0.62214512 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 1 0 By MS/MS 2.33 0.471 2 1 3 38.448 33.648 2 2.2271E-06 35894 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.754 84.985 30317000 0 30317000 0 0 0 0 0 0 0 0 0 0 0 0 0 31624 2775 28861 265871;265872;265873 211081;211082 211082 4409;4410 2 LPQPPEGQCYSN Unmodified 1388.6031 0.60306466 2279 Q13404 UBE2V1 Ubiquitin-conjugating enzyme E2 variant 1 yes yes 0 0 0 By MS/MS 1 0 1 1 101.93 107.2 3 0.031917 86896 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 35.204 31.882 3623900 3623900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31625 2279 28862 265874 211083 211083 1 LPQPPEGQTYNN Unmodified 1356.631 0.63099397 2585 Q15819 UBE2V2 Ubiquitin-conjugating enzyme E2 variant 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.18 2.59 1 10 1 1 1 1 1 1 1 1 1 1 1 51.625 52.15 2;3 0.00044098 87017 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 81.525 73.914 86975000 9500600 0 0 4050900 3992500 14168000 7268600 5118400 2751200 14264000 11336000 0 6689900 7834300 0 31626 2585 28863 265875;265876;265877;265878;265879;265880;265881;265882;265883;265884;265885 211084;211085 211084 1 LPQPVQPDPVSHCK Unmodified 1600.8032 0.80316145 813 P05556 ITGB1 Integrin beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 6.17 3.85 2 1 3 2 1 1 1 1 45.226 42.938 3 0.0083117 53325 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 43.813 30.096 80859000 0 51047000 4464500 0 0 0 0 0 7719000 5123700 0 0 12505000 0 0 31627 813 28864 265886;265887;265888;265889;265890;265891 211086;211087;211088;211089;211090 211090 4 LPQQPLVAEPTAEGEPHLPTGR Unmodified 2336.2125 0.21245898 2798 Q5TGY1 TMCO4 Transmembrane and coiled-coil domain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.658 73.721 3 1.0925E-85 85011 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 128.01 125.44 454600000 0 0 0 25286000 31652000 31627000 29326000 38635000 26886000 41708000 43405000 59144000 44375000 43023000 39531000 31628 2798 28865 265892;265893;265894;265895;265896;265897;265898;265899;265900;265901;265902;265903 211091;211092;211093;211094;211095;211096;211097;211098;211099;211100;211101;211102;211103;211104;211105;211106;211107;211108;211109;211110;211111 211093 21 LPQQSHSAFGATSSSSGFGK Unmodified 1979.9337 0.93371793 3199 Q86XP3 DDX42 ATP-dependent RNA helicase DDX42 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 50.878 44.92 3 1.5472E-24 61736 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 113.05 107.51 168110000 153870000 0 14238000 0 0 0 0 0 0 0 0 0 0 0 0 31629 3199 28866 265904;265905 211112;211113 211112 2 LPQQSYNFDPDTCDESVDPFK Unmodified 2501.0693 0.069284717 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 0 0 By MS/MS 2.5 0.5 2 2 4 83.997 80 2;3 1.3722E-59 99255 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.26 101.38 139220000 0 139220000 0 0 0 0 0 0 0 0 0 0 0 0 0 31630 645 28867 265906;265907;265908;265909 211114;211115;211116;211117;211118 211114 5 LPQSQLSHQDLQLVK Unmodified 1732.9472 0.94718315 2531 Q15418 RPS6KA1 Ribosomal protein S6 kinase alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.38 3.71 6 1 14 2 3 2 1 2 2 2 2 1 2 2 64.162 62.349 2;3 2.8853E-12 77062 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 114.64 97.012 866790000 329420000 199050000 99916000 0 11128000 40032000 19144000 0 23290000 36720000 26316000 0 0 26681000 55097000 31631 2531 28868 265910;265911;265912;265913;265914;265915;265916;265917;265918;265919;265920;265921;265922;265923;265924;265925;265926;265927;265928;265929;265930 211119;211120;211121;211122;211123;211124;211125;211126;211127;211128;211129;211130;211131;211132;211133;211134 211128 14 LPQTEQELK Unmodified 1084.5764 0.57643921 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 31.689 30.798 2 0.00089587 38708 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.42 78.455 1485200000 25758000 842120000 0 33665000 36100000 58070000 38255000 34011000 37902000 62019000 56193000 71412000 57785000 57287000 74638000 31632 4634 28869 265931;265932;265933;265934;265935;265936;265937;265938;265939;265940;265941;265942;265943;265944;265945 211135;211136;211137;211138;211139;211140;211141;211142;211143;211144;211145;211146;211147;211148;211149;211150 211139 16 LPQTPLDTGIPFPPVFSTSSAGVK Unmodified 2455.2999 0.299877 3061 Q7LBC6 KDM3B Lysine-specific demethylase 3B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 2 2 2 2 96.684 96.847 2;3 1.6928E-05 112664 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 41.904 31.402 39309000 0 0 0 0 0 0 0 2138400 0 12128000 5653100 0 0 0 19390000 31633 3061 28870 265946;265947;265948;265949;265950;265951;265952;265953 211151;211152;211153;211154;211155;211156;211157 211151 6 LPQVAEEISGPLTSANK Unmodified 1752.9258 0.92577901 565 O75955 FLOT1 Flotillin-1 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 79.043 79.13 2 2.5734E-06 91849 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 79.089 65.183 36960000 0 0 0 0 3408800 2125700 3272000 0 0 5266400 5420700 4703600 3925200 3654500 5183300 31634 565 28871 265954;265955;265956;265957;265958;265959;265960;265961;265962 211158;211159;211160;211161;211162 211161 4 LPREEEEEEEDDDEEEK Unmodified 2147.8502 0.85022662 1581 P49593 PPM1F Protein phosphatase 1F yes yes 0 0 1 By MS/MS By MS/MS 4.67 3.77 2 1 2 1 24.602 21.337 2;3 2.9545E-57 29392 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 186.49 157.68 44836000 37171000 0 0 0 0 0 0 0 0 0 0 0 0 0 7664700 31635 1581 28872 265963;265964;265965 211163;211164;211165;211166 211166 4 LPREPSNPER Unmodified 1193.6153 0.61528433 1166 P23588 EIF4B Eukaryotic translation initiation factor 4B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.435 20.638 3 0.00098392 20768 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 90.913 63.432 418940000 0 0 0 15174000 19249000 15737000 20137000 28026000 16679000 24580000 55240000 93050000 24845000 27610000 78610000 31636 1166 28873 265966;265967;265968;265969;265970;265971;265972;265973;265974;265975;265976;265977 211167;211168;211169;211170;211171;211172;211173;211174;211175;211176;211177;211178;211179 211172 8 LPRTTTESEVMK Unmodified 1390.7126 0.71261511 953 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 36.904 32.056 3 0.00010402 44526 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 102.62 84.812 1781700000 1449500000 217020000 115140000 0 0 0 0 0 0 0 0 0 0 0 0 31637 953 28874 265978;265979;265980;265981 211180;211181;211182 211182 1 LPRTTTESEVMK Oxidation (M) 1406.7075 0.70752973 953 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 24.983 20.764 3 0.0038343 25943 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 65.563 44.706 820450000 583060000 77557000 159830000 0 0 0 0 0 0 0 0 0 0 0 0 31638 953 28874 265982;265983;265984;265985;265986 211183;211184;211185 211183 1231 2 LPRWQETCVDAIK Unmodified 1614.8188 0.81881152 4906 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 74.102 65.971 3 0.0099997 87285 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.278 23.392 5588000 5588000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31639 4906 28875 265987 211186 211186 1 LPSAAFFSETQR Unmodified 1352.6725 0.67246486 4821 Q9P2K8 EIF2AK4 Eukaryotic translation initiation factor 2-alpha kinase 4 yes yes 0 0 0 By MS/MS 10 0 1 1 73.683 73.828 2 0.0363 84217 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 49.35 35.144 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31640 4821 28876 265988 211187 211187 1 LPSAPTPLRPGFSR Unmodified 1494.8307 0.83069683 3588 Q8WXE0 CASKIN2 Caskin-2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.396 63.489 3 0.0013394 72439 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 53.001 38.971 179520000 0 0 0 10574000 6941100 15473000 13485000 16590000 9969100 17289000 12269000 18632000 14349000 15151000 28802000 31641 3588 28877 265989;265990;265991;265992;265993;265994;265995;265996;265997;265998;265999;266000 211188;211189;211190;211191;211192;211193;211194;211195;211196;211197;211198 211192 11 LPSAQTPNGTDYVASGK Unmodified 1704.8319 0.83187862 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.699 47.861 2 3.1882E-70 53907 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 190.37 168.69 245980000 0 0 0 12251000 15781000 13981000 15158000 16024000 15396000 33826000 24077000 30601000 22961000 18553000 27375000 31642 5216 28878 266001;266002;266003;266004;266005;266006;266007;266008;266009;266010;266011;266012 211199;211200;211201;211202;211203;211204;211205;211206;211207;211208;211209;211210;211211 211207 13 LPSCAQGSHTELLTAK Unmodified 1711.8563 0.85631924 543 O75815 BCAR3 Breast cancer anti-estrogen resistance protein 3 yes yes 0 0 0 By MS/MS 2 0 1 1 50.195 46.28 3 0.011438 58036 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 36.127 17.988 35350000 0 0 35350000 0 0 0 0 0 0 0 0 0 0 0 0 31643 543 28879 266013 211212 211212 1 LPSDPQESTK Unmodified 1100.535 0.53496832 2726 Q5H9F3 BCORL1 BCL-6 corepressor-like protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 19.043 19.246 2 0.011861 19900 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 53.493 31.407 21573000 0 0 0 1915400 1428600 2121000 1288800 0 0 2747800 2808200 3108600 2582600 1615800 1956200 31644 2726 28880 266014;266015;266016;266017;266018;266019;266020;266021;266022;266023 211213 211213 1 LPSFELLHK Unmodified 1082.6124 0.61243078 2608 Q16531 DDB1 DNA damage-binding protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 72.728 73.007 2 0.013737 84097 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 59.35 41.314 17074000 0 0 0 0 0 0 0 3797200 0 0 0 5172300 0 0 8104200 31645 2608 28881 266024;266025;266026 211214 211214 1 LPSGAYEGGALIK Unmodified 1274.6871 0.68705229 2201 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 62.942 62.069 2 9.3283E-08 70788 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 98.04 74.687 184780000 0 46460000 0 8750100 14714000 13622000 13110000 12448000 12127000 17376000 15894000 0 17689000 12593000 0 31646 2201 28882 266027;266028;266029;266030;266031;266032;266033;266034;266035;266036;266037;266038 211215;211216;211217;211218;211219;211220;211221;211222;211223;211224;211225;211226;211227 211216 13 LPSGEDYNLK Unmodified 1134.5557 0.55570376 5131 Q9Y2Z0 SUGT1 Suppressor of G2 allele of SKP1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.69 3.47 2 2 9 1 2 1 1 1 1 1 1 1 1 1 1 44.133 42.906 2 0.00050331 47387 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 125.16 83.052 1944100000 603170 1332000000 0 36422000 39717000 0 54235000 57624000 40168000 0 92575000 0 61592000 64937000 164230000 31647 5131 28883 266039;266040;266041;266042;266043;266044;266045;266046;266047;266048;266049;266050;266051 211228;211229;211230;211231;211232;211233;211234;211235;211236;211237;211238;211239 211237 10 LPSGSGAASPTGSAVDIR Unmodified 1641.8322 0.83221298 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.389 51.538 2 1.8638E-37 57430 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 155.98 133.98 244480000 0 0 0 18162000 13851000 19206000 17814000 19592000 12882000 20866000 23747000 30195000 18732000 19709000 29727000 31648 2172 28884 266052;266053;266054;266055;266056;266057;266058;266059;266060;266061;266062;266063 211240;211241;211242;211243;211244;211245;211246;211247;211248 211247 6 LPSHLSEYER Unmodified 1229.6041 0.60405094 564 O75943 RAD17 Cell cycle checkpoint protein RAD17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 36.838 37.079 3 0.033938 41031 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 31.185 23.923 72639000 0 0 0 0 3958700 9105100 5181600 4825200 4824200 7353900 5791200 10473000 6334800 6300200 8491700 31649 564 28885 266064;266065;266066;266067;266068;266069;266070;266071;266072;266073;266074 211249 211249 1 LPSIPLVPVSAQK Unmodified 1347.8126 0.81258715 2577 Q15785 TOMM34 Mitochondrial import receptor subunit TOM34 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 85.151 84.035 2 1.0295E-12 97449 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 130.98 125.64 1638200000 62348000 130990000 1673200 75429000 97314000 121620000 126770000 96028000 96273000 138710000 133700000 167150000 90457000 88173000 211600000 31650 2577 28886 266075;266076;266077;266078;266079;266080;266081;266082;266083;266084;266085;266086;266087;266088;266089;266090 211250;211251;211252;211253;211254;211255;211256;211257;211258;211259;211260;211261;211262;211263;211264;211265;211266 211251 16 LPSLFNPGNPDAFHEK Unmodified 1781.8737 0.87368386 2443 Q14746 COG2 Conserved oligomeric Golgi complex subunit 2 yes yes 0 0 0 By MS/MS 2 0 1 1 85.082 76.952 3 5.9719E-11 100426 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.311 82.84 21010000 21010000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31651 2443 28887 266091 211267 211267 1 LPSLGAGFSQGLK Unmodified 1273.703 0.7030367 3296 Q8IZL8 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 77.542 77.575 2 1.1516E-06 89595 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 92.611 48.302 108720000 0 0 0 6407100 9014600 9621700 5779000 7254500 0 11890000 12327000 0 15223000 11137000 20061000 31652 3296 28888 266092;266093;266094;266095;266096;266097;266098;266099;266100;266101 211268;211269;211270;211271;211272;211273;211274;211275;211276;211277;211278;211279;211280 211275 13 LPSNTLDR Unmodified 914.48214 0.48214489 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 26.609 26.902 2 0.0075386 28385 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 89.296 31.832 220220000 0 0 0 0 29965000 0 0 0 0 0 43332000 58860000 45568000 42494000 0 31653 1986 28889 266102;266103;266104;266105;266106 211281;211282;211283;211284;211285 211284 5 LPSPDVRQDDGEDTLFSEPK Unmodified 2244.0546 0.054620931 4389 Q9H425 C1orf198 Uncharacterized protein C1orf198 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 72.257 71.515 3 0.00032412 83034 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 47.204 33.577 49711000 9946000 0 0 0 0 0 3346600 4790000 5123500 6304100 4607600 5854800 5630300 4108300 0 31654 4389 28890 266107;266108;266109;266110;266111;266112;266113;266114;266115 211286;211287;211288;211289;211290;211291;211292;211293 211291 8 LPSPTSPFSSLSQDQAATSK Unmodified 2048.0062 0.006214175 3573 Q8WWI1 LMO7 LIM domain only protein 7 yes yes 0 0 0 By matching By matching By matching By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 76.436 76.476 2 6.8436E-05 87489 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 51.546 44.002 14157000 0 0 0 0 1898100 2423100 2321200 0 0 0 3281700 0 1791200 2441400 0 31655 3573 28891 266116;266117;266118;266119;266120;266121 211294 211294 1 LPSRPGAQGVEPQNLR Unmodified 1717.9224 0.92236539 3594 Q8WXI9 GATAD2B Transcriptional repressor p66-beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 44.435 44.607 3 1.7914E-19 49837 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 106.82 87.991 515650000 0 0 0 32968000 25830000 41241000 30350000 43442000 25237000 62781000 57604000 47668000 45073000 45043000 58412000 31656 3594 28892 266122;266123;266124;266125;266126;266127;266128;266129;266130;266131;266132;266133 211295;211296;211297;211298;211299;211300;211301;211302;211303;211304;211305;211306;211307;211308;211309;211310;211311;211312 211303 18 LPSRPPLPGSGGSQSGAK Unmodified 1691.8955 0.89548193 5221 Q9Y570 PPME1 Protein phosphatase methylesterase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 42.798 43.053 3 0.00029797 48047 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 54.974 34.877 89890000 0 0 0 12383000 0 0 9415100 6018200 6494600 7934200 13930000 7628100 10056000 9794700 6235600 31657 5221 28893 266134;266135;266136;266137;266138;266139;266140;266141;266142;266143 211313;211314;211315;211316;211317;211318;211319;211320 211313 8 LPSSIEYSDLSR Unmodified 1365.6776 0.67760981 2525 Q15386 UBE3C Ubiquitin-protein ligase E3C yes yes 0 0 0 By MS/MS 10 0 1 1 63.554 63.752 2 0.042377 72064 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 47.302 29.482 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31658 2525 28894 266144 211321 211321 1 LPSSVFASEFEEDVGLLNK Unmodified 2080.0365 0.036451671 3850 Q96GA3 LTV1 Protein LTV1 homolog yes yes 0 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 2 2 98.315 90.184 2;3 9.0613E-31 116378 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 154.1 142.65 25253000 25253000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31659 3850 28895 266145;266146;266147;266148 211322;211323;211324;211325 211324 4 LPSSVGQK Unmodified 814.45487 0.45486751 4550 Q9NPF5 DMAP1 DNA methyltransferase 1-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 15.573 15.744 2 0.0068497 15543 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 94.006 28.109 158100000 0 0 0 0 9885100 3000600 2967100 17839000 1453900 22481000 30202000 0 22732000 13589000 33950000 31660 4550 28896 266149;266150;266151;266152;266153;266154;266155;266156;266157;266158 211326;211327;211328;211329;211330;211331 211326 6 LPSTDQQESCSSTPGLEEPLFK Unmodified 2449.1319 0.13188497 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 0 By MS/MS 3 0 1 1 80.544 77.212 3 0.0023936 92573 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 33.79 29.137 5923500 0 5923500 0 0 0 0 0 0 0 0 0 0 0 0 0 31661 2446 28897 266159 211332 211332 1 LPSTSDDCPAIGTPLR Unmodified 1698.8247 0.82468476 2558 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.775 65.861 2 0.00031853 75562 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 84.718 70.812 66153000 0 0 0 2886100 4407400 4674100 7374700 4928100 4443500 5447900 6481900 6134900 5019300 6870300 7484700 31662 2558 28898 266160;266161;266162;266163;266164;266165;266166;266167;266168;266169;266170;266171 211333;211334;211335;211336;211337;211338;211339;211340;211341;211342;211343;211344 211333 12 LPSVEENK Unmodified 914.47091 0.4709115 2433 Q14686 NCOA6 Nuclear receptor coactivator 6 yes yes 0 0 0 By MS/MS 2 0 1 1 27.954 23.649 2 0.017177 31139 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.862 39.896 20716000 0 20716000 0 0 0 0 0 0 0 0 0 0 0 0 0 31663 2433 28899 266172 211345 211345 1 LPSVPSTHLPAGPAPK Unmodified 1567.8722 0.8722273 4241 Q9BY43 CHMP4A Charged multivesicular body protein 4a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.06 3.8 5 1 10 3 2 1 1 1 1 1 1 1 1 1 1 1 65.859 63.545 2;3 0.00022147 72228 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 65.811 58.03 449500000 139280000 110080000 26209000 0 4046200 0 11121000 6780600 7552800 14060000 23141000 28532000 6817600 20992000 50878000 31664 4241 28900 266173;266174;266175;266176;266177;266178;266179;266180;266181;266182;266183;266184;266185;266186;266187;266188 211346;211347;211348;211349;211350;211351;211352;211353;211354;211355 211352 10 LPSVPSTHLPAGPAPKVDEDEEALK Unmodified 2596.3384 0.33844735 4241 Q9BY43 CHMP4A Charged multivesicular body protein 4a yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 77.484 71.143 3;4 8.0878E-09 92494 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.99 43.818 58263000 48253000 0 10010000 0 0 0 0 0 0 0 0 0 0 0 0 31665 4241 28901 266189;266190;266191 211356;211357;211358 211357 3 LPSYFVRPDLGPK Unmodified 1487.8136 0.81364979 3061 Q7LBC6 KDM3B Lysine-specific demethylase 3B yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 74.947 74.981 3 0.0005613 86456 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 69.602 61.425 193690000 0 0 0 9041100 8193900 26900000 10524000 19343000 24255000 17910000 18449000 0 17611000 0 41458000 31666 3061 28902 266192;266193;266194;266195;266196;266197;266198;266199;266200;266201 211359;211360;211361;211362;211363;211364;211365;211366;211367 211359 9 LPSYGMQK Oxidation (M) 938.45315 0.45315295 4373 Q9H2U1 DHX36 ATP-dependent RNA helicase DHX36 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 27.974 23.062 2 0.044404 30568 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.087 27.281 17001000 4626000 12375000 0 0 0 0 0 0 0 0 0 0 0 0 0 31667 4373 28903 266202;266203 211368 211368 1 LPTDASEDADQPAGDSAILLR Unmodified 2154.0441 0.044056244 434 O60826 CCDC22 Coiled-coil domain-containing protein 22 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 75.563 75.573 2 3.5188E-59 87248 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 164.65 152.09 61097000 0 0 0 2639600 3845300 6739800 4341500 5397600 3883200 6505900 0 21649000 0 6094900 0 31668 434 28904 266204;266205;266206;266207;266208;266209;266210;266211;266212;266213 211369;211370;211371;211372;211373;211374;211375;211376;211377;211378 211376 10 LPTEMEGK Unmodified 903.43717 0.43716853 4707 Q9NWX6 THG1L Probable tRNA(His) guanylyltransferase yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 29.836 25.441 2 0.043506 33218 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.198 50.415 62582000 0 62582000 0 0 0 0 0 0 0 0 0 0 0 0 0 31669 4707 28905 266214;266215 211379 211379 1 LPTEVNHVPSGPSIPADR Unmodified 1884.9694 0.96937516 3999 Q96T58 SPEN Msx2-interacting protein yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.497 60.602 3 0.00090378 69121 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 47.68 40.906 103970000 0 0 0 5729500 4975300 8104000 9046400 8763400 7641100 9899100 8368500 10515000 11547000 7063100 12320000 31670 3999 28906 266216;266217;266218;266219;266220;266221;266222;266223;266224;266225;266226;266227 211380;211381;211382;211383;211384;211385;211386;211387;211388 211385 9 LPTFGAPEQLVDLK Unmodified 1526.8344 0.83444481 2401 Q14258 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 87.7 87.39 2 1.3384E-12 101169 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 106.29 77.564 278790000 0 135430000 0 0 5135400 7474200 5803800 8510900 7833900 19053000 11337000 15641000 6571500 11451000 44552000 31671 2401 28907 266228;266229;266230;266231;266232;266233;266234;266235;266236;266237;266238;266239;266240 211389;211390;211391;211392;211393;211394;211395;211396;211397;211398;211399;211400;211401;211402;211403;211404;211405;211406 211399 18 LPTGQISGPEIK Unmodified 1238.6871 0.68705229 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 57.129 56.264 2 0.0001237 63591 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 87.184 51.74 669830000 0 147100000 2536200 27915000 25378000 26016000 47154000 49802000 29230000 40100000 39088000 57919000 59384000 49626000 68583000 31672 2172 28908 266241;266242;266243;266244;266245;266246;266247;266248;266249;266250;266251;266252;266253;266254;266255 211407;211408;211409;211410;211411;211412;211413;211414;211415;211416;211417;211418;211419;211420;211421;211422 211413 14 LPTHPFEADLLEMAEMIAEDEEK Unmodified 2657.2241 0.2240708 2834 Q5VZL5 ZMYM4 Zinc finger MYM-type protein 4 yes yes 0 0 0 By MS/MS 2 0 1 1 103.09 94.956 3 4.8612E-15 122105 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.319 80.126 9293200 9293200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31673 2834 28909 266256 211423 211423 1 LPTLVSLFDDEDEEDNLFGGTAAK Unmodified 2595.2228 0.22280847 2840 Q641Q2 FAM21A WASH complex subunit FAM21A yes yes 0 0 0 By MS/MS 2 0 1 1 99.941 91.811 2 1.0586E-108 118323 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 164.41 159.86 6582600 6582600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31674 2840 28910 266257 211424 211424 1 LPTPTSSVPAQK Unmodified 1224.6714 0.67140222 4138 Q9BTA9 WAC WW domain-containing adapter protein with coiled-coil yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 5.4 3.77 2 1 2 3 1 1 42.427 40.077 2 4.2511E-127 51049 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 242.83 205.35 138730000 0 78363000 0 0 0 0 0 0 0 0 0 0 35381000 24986000 0 31675 4138 28911 266258;266259;266260;266261;266262 211425;211426;211427;211428;211429;211430 211427 5 LPTPVLLPYK Unmodified 1139.6954 0.69543213 4001 Q96T76 MMS19 MMS19 nucleotide excision repair protein homolog yes yes 0 0 0 By MS/MS 10 0 1 1 81.64 81.848 2 0.034937 94406 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.631 22.94 3829600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3829600 31676 4001 28912 266263 211431 211431 1 LPTPVLLPYKPQVIR Unmodified 1733.0604 0.060362418 4001 Q96T76 MMS19 MMS19 nucleotide excision repair protein homolog yes yes 0 0 1 By MS/MS By matching 10 0 2 1 1 83.315 83.424 3 0.040201 96589 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 27.029 22.786 9384600 0 0 0 0 0 3114300 0 0 0 0 0 0 0 0 6270300 31677 4001 28913 266264;266265 211432 211432 1 LPTPVNQATLSQTQGSEK Unmodified 1897.9745 0.97452012 3131 Q86T24 ZBTB33 Transcriptional regulator Kaiso yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 55.99 56.08 2 1.0854E-05 63730 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 82.362 74.258 24083000 0 0 0 0 2271500 2340600 3304800 2278500 1730500 4032100 3741300 0 0 4383200 0 31678 3131 28914 266266;266267;266268;266269;266270;266271;266272;266273;266274;266275 211433;211434;211435;211436;211437;211438 211436 6 LPTPVTDFILSR Unmodified 1357.7606 0.76055158 3431 Q8NEX9 SDR9C7 Short-chain dehydrogenase/reductase family 9C member 7 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 89.417 89.076 2 0.0073075 103607 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 50.292 38.079 1556300 0 0 0 1556300 0 0 0 0 0 0 0 0 0 0 0 31679 3431 28915 266276;266277 211439;211440 211440 2 LPTSEESRLGSK Unmodified 1302.6779 0.67794416 240 O15014 ZNF609 Zinc finger protein 609 yes yes 0 0 1 By MS/MS By matching 2 0 2 1 1 29.697 25.285 3 0.0020758 35197 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.593 56.293 29789000 17982000 0 11808000 0 0 0 0 0 0 0 0 0 0 0 0 31680 240 28916 266278;266279 211441 211441 1 LPTSEPEADAEIEPK Unmodified 1624.7832 0.7831971 4254 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching 10 0 8 1 1 1 1 1 1 1 1 52.784 52.782 2 0.0019432 60354 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 49.5 32.475 27568000 0 0 0 3557300 2794900 4110200 3716300 3495000 2677000 0 3494400 0 3722500 0 0 31681 4254 28917 266280;266281;266282;266283;266284;266285;266286;266287 211442;211443 211443 2 LPTSSKPPGAVPSNALTNPAPSK Unmodified 2230.1957 0.19574628 3093 Q7Z434 MAVS Mitochondrial antiviral-signaling protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 56.599 56.652 3 2.0785E-07 63751 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.247 40.993 9392300 0 0 0 0 2433200 0 0 0 0 0 0 0 0 0 6959100 31682 3093 28918 266288;266289;266290;266291 211444;211445;211446 211446 3 LPTSVSLFDDEDEEDNLFGGTAAK Unmodified 2569.1708 0.1707729 5195 Q9Y4E1 FAM21C WASH complex subunit FAM21C yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 93.11 87.803 3 5.6474E-12 111417 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.243 38.885 18231000 15780000 0 2450900 0 0 0 0 0 0 0 0 0 0 0 0 31683 5195 28919 266292;266293 211447;211448 211447 2 LPTTGMTITK Oxidation (M) 1077.574 0.57399637 2379 Q14155 ARHGEF7 Rho guanine nucleotide exchange factor 7 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 32.065 32.424 2 0.0061845 34832 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.859 37.338 27034000 0 0 0 0 0 0 4666700 3720700 0 5292600 0 7195700 0 0 6157900 31684 2379 28920 266294;266295;266296;266297;266298;266299 211449;211450;211451;211452 211452 3869 4 LPTTGMTITK Unmodified 1061.5791 0.57908174 2379 Q14155 ARHGEF7 Rho guanine nucleotide exchange factor 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 50.183 49.23 2 0.010195 55854 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 56.434 20.996 188330000 65055000 0 2103600 0 0 11410000 9008400 7512000 0 23375000 14709000 16725000 0 13119000 25313000 31685 2379 28920 266300;266301;266302;266303;266304;266305;266306;266307;266308;266309 211453;211454;211455;211456;211457 211457 5 LPTTGYLVYR Unmodified 1181.6445 0.64445919 2340 Q13671 RIN1 Ras and Rab interactor 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 69.587 69.667 2 0.045604 80017 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 38.303 19.209 13003000 0 0 0 0 1612800 2665000 0 0 1646200 0 3024900 0 0 0 4054000 31686 2340 28921 266310;266311;266312;266313;266314 211458 211458 1 LPTVPLSGMYNK Unmodified 1318.6955 0.69550848 188 O14562 UBFD1 Ubiquitin domain-containing protein UBFD1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 76.592 76.612 2 0.00017897 87906 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.817 70.731 54208000 0 0 0 2187400 2311100 6229600 0 0 0 5025300 5408200 5830600 3090800 5439400 18685000 31687 188 28922 266315;266316;266317;266318;266319;266320;266321;266322;266323 211459;211460;211461;211462;211463;211464;211465 211461 7 LPVALDPGAK Unmodified 979.57023 0.57023162 788 P04843 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 57.225 56.642 2 0.0067887 64214 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 64.04 42.752 249050000 0 60781000 2436500 0 0 14645000 17691000 23828000 14436000 16781000 19812000 27002000 15561000 15950000 20130000 31688 788 28923 266324;266325;266326;266327;266328;266329;266330;266331;266332;266333;266334;266335;266336 211466;211467;211468;211469;211470;211471;211472;211473;211474;211475;211476;211477;211478;211479;211480;211481;211482 211480 17 LPVATDFEFK Unmodified 1165.6019 0.60192568 3815 Q96EK7 FAM120B Constitutive coactivator of peroxisome proliferator-activated receptor gamma yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching 7.12 3.72 2 1 5 2 1 1 1 1 1 1 80.147 78.857 2 0.0032899 98190 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.331 69.947 98910000 0 78417000 3721700 0 2676600 3341300 0 2623700 0 3880900 0 4249100 0 0 0 31689 3815 28924 266337;266338;266339;266340;266341;266342;266343;266344 211483;211484;211485 211484 3 LPVCSQQQGEPDLTEHEK Unmodified 2093.9688 0.96878281 3834 Q96F63 CCDC97 Coiled-coil domain-containing protein 97 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 43.98 44.107 3 0.00075038 48338 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.855 42.613 41282000 0 0 0 0 6618000 0 0 0 10049000 0 0 0 0 0 24615000 31690 3834 28925 266345;266346;266347 211486;211487;211488 211487 3 LPVDLAEELGHR Unmodified 1347.7147 0.71466402 1467 P42771 CDKN2A Cyclin-dependent kinase inhibitor 2A yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 74.879 75.119 3 0.039388 86210 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 31.722 28.244 9480900 0 0 0 0 0 0 0 0 1013600 0 0 0 0 0 8467300 31691 1467 28926 266348;266349 211489 211489 0 LPVDPAPPCPRPLPTSSTSSLAPVSGSGPGPSPAR Unmodified 3405.7351 0.73508847 3915 Q96L91 EP400 E1A-binding protein p400 yes yes 0 0 1 By matching By matching By MS/MS By matching 10 0 4 1 1 1 1 77.708 77.742 3 8.6719E-09 89942 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 31.58 21.064 29559000 0 0 0 0 3229900 4691600 0 0 0 0 0 12018000 0 0 9619800 31692 3915 28927 266350;266351;266352;266353 211490 211490 1 LPVDSVFNK Unmodified 1017.5495 0.54949617 1596 P49756 RBM25 RNA-binding protein 25 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 61.604 61.661 2 0.011907 70157 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 62.107 62.107 71664000 0 0 0 2508900 2382900 9149500 4139100 4704100 8353500 8542400 8193900 8177400 6848700 8663900 0 31693 1596 28928 266354;266355;266356;266357;266358;266359;266360;266361;266362;266363;266364 211491;211492;211493;211494;211495;211496;211497;211498 211493 8 LPVDYYGIPFAAPTALASR Unmodified 2021.0622 0.062212911 2779 Q5T6F2 UBAP2 Ubiquitin-associated protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 2 1 2 2 1 1 2 93.905 94.05 2;3 2.2242E-06 109315 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 99.011 92.778 56023000 0 0 0 0 0 1248800 0 3412100 1463500 9330600 6349700 3174300 0 2068700 28975000 31694 2779 28929 266365;266366;266367;266368;266369;266370;266371;266372;266373;266374;266375;266376 211499;211500;211501;211502;211503;211504;211505 211499 7 LPVEEAYK Unmodified 947.4964 0.49639797 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 38.488 38.012 2 0.049549 42598 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 47.082 10.381 146290000 0 0 0 115300000 30986000 0 0 0 0 0 0 0 0 0 0 31695 1029 28930 266377;266378 211506 211506 1 LPVESVHILEDK Unmodified 1377.7504 0.75038083 354 O43683 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 66.97 66.796 2;3 0.00054877 76150 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.435 50.857 109560000 0 0 4207500 5123500 3412000 7703500 7196400 5942900 5953500 8254500 13031000 13690000 8313300 9729700 17004000 31696 354 28931 266379;266380;266381;266382;266383;266384;266385;266386;266387;266388;266389;266390;266391 211507;211508;211509;211510;211511;211512;211513;211514;211515;211516;211517;211518;211519;211520;211521 211519 15 LPVHTEISWK Unmodified 1208.6554 0.65535823 3518 Q8TEQ6 GEMIN5 Gem-associated protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS 6.36 3.98 5 6 2 1 2 1 1 1 1 1 1 63.164 60.885 2;3 6.2251E-06 82901 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 128.38 78.668 217920000 140830000 16625000 6780100 5340800 0 0 0 5989200 0 0 0 10321000 4187000 7138000 20705000 31697 3518 28932 266392;266393;266394;266395;266396;266397;266398;266399;266400;266401;266402 211522;211523;211524;211525;211526 211524 4 LPVLAGCLK Unmodified 969.56812 0.56812313 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.7 3.52 2 1 7 1 2 1 1 1 1 1 1 1 70.777 68.828 2 0.0073023 88417 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.262 49.57 105830000 41726000 42235000 0 2251500 2626400 0 0 2750500 0 4084700 0 0 5129600 5031900 0 31698 1986 28933 266403;266404;266405;266406;266407;266408;266409;266410;266411;266412 211527;211528;211529;211530;211531;211532;211533;211534;211535 211528 9 LPVPAAAPTPWETHK Unmodified 1613.8566 0.85657723 2188 Q12788 TBL3 Transducin beta-like protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 72.186 72.244 3 0.0010171 83225 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 38.199 30.483 41284000 0 0 0 2202800 2962500 3786500 3305500 3703500 2409600 4061600 5743800 4768000 0 0 8340600 31699 2188 28934 266413;266414;266415;266416;266417;266418;266419;266420;266421;266422 211536;211537;211538;211539;211540;211541 211537 6 LPVPAPGGRPSPAPPAAAQPPAAAVPGPSVPQPAPGQPSPVLQLQQK Unmodified 4487.4441 0.44413725 1655 P51531 SMARCA2 Probable global transcription activator SNF2L2 yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 84.545 84.686 4 2.0924E-05 97939 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 19.051 17.926 19153000 0 0 0 0 0 0 0 0 0 7294100 0 0 0 0 11859000 31700 1655 28935 266423;266424 211542 211542 1 LPVPQVSATTAPAGSAPPSSTLPAASSLK Unmodified 2702.4491 0.44906043 3037 Q76L83 ASXL2 Putative Polycomb group protein ASXL2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.88 80.94 3 8.1416E-05 93380 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 29.346 22.07 73291000 0 0 0 2285700 4787500 5298500 5696300 5193800 3943500 8219200 5439600 9480400 6441300 6940100 9565000 31701 3037 28936 266425;266426;266427;266428;266429;266430;266431;266432;266433;266434;266435;266436 211543 211543 1 LPVRTETAMPR Unmodified 1269.6863 0.68634078 4120 Q9BRX5 GINS3 DNA replication complex GINS protein PSF3 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 37.828 38.227 3 0.020578 41216 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 30.004 12.531 8487700 0 0 0 0 0 0 1776900 0 0 0 0 0 0 0 6710900 31702 4120 28937 266437;266438 211544 211544 1 LPVSKDEPDTLTLR Unmodified 1582.8566 0.85663681 3006 Q6ZRS2 SRCAP Helicase SRCAP yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 58.351 58.294 3 0.0033963 66270 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 41.014 26.224 19339000 0 0 0 5022100 0 0 5549500 0 0 3763700 0 0 0 5003400 0 31703 3006 28938 266439;266440;266441;266442 211545 211545 1 LPVSSLTISR Unmodified 1071.6288 0.62880913 3622 Q92552 MRPS27 28S ribosomal protein S27, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 63.279 63.542 2 0.022012 72593 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 46.334 28.349 40433000 0 0 0 0 0 7445800 0 0 0 0 8053000 0 9723100 0 15211000 31704 3622 28939 266443;266444;266445;266446 211546 211546 1 LPVTINK Unmodified 783.48544 0.48543935 689 O95782 AP2A1 AP-2 complex subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.257 39.436 2 0.026912 42376 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.984 14.421 240970000 0 0 0 16674000 13671000 21443000 16246000 12050000 11628000 25754000 22333000 27384000 17921000 18571000 37297000 31705 689 28940 266447;266448;266449;266450;266451;266452;266453;266454;266455;266456;266457;266458 211547;211548 211548 1 LPVTTWEK Unmodified 972.52803 0.52803245 202 O14686 KMT2D Histone-lysine N-methyltransferase 2D yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 57.594 52.747 2 0.018072 68108 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.296 47.067 33869000 0 31259000 2610100 0 0 0 0 0 0 0 0 0 0 0 0 31706 202 28941 266459;266460 211549 211549 1 LPVVISQCGEM Oxidation (M) 1247.589 0.5889945 331 O43447 PPIH Peptidyl-prolyl cis-trans isomerase H yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.69 3.07 1 1 11 1 1 1 1 1 1 1 1 1 1 1 1 1 69.482 69.501 2 1.9618E-09 89702 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 143.28 134.82 132230000 14766000 35876000 0 4750300 5355900 5394900 0 5506300 4279700 6567800 9406300 12777000 6638800 8481600 12431000 31707 331 28942 266461;266462;266463;266464;266465;266466;266467;266468;266469;266470;266471;266472;266473 211550;211551;211552;211553 211551 423 4 LPVVISQCGEM Unmodified 1231.5941 0.59407988 331 O43447 PPIH Peptidyl-prolyl cis-trans isomerase H yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 78.261 77.94 2 0.012294 94221 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.279 71.755 174300000 0 110960000 0 0 4887600 0 3757000 6792700 3578500 7011800 5735600 7030100 3662400 7689400 13197000 31708 331 28942 266474;266475;266476;266477;266478;266479;266480;266481;266482;266483;266484 211554;211555;211556;211557 211554 4 LPVVVPLHSLDEK Unmodified 1444.829 0.8289655 573 O76031 CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 77.347 77.395 3 0.01198 89288 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 38.14 30.036 80157000 0 0 0 3204200 3796800 4879200 0 6041500 5143700 5788900 9306400 12497000 6539100 8875600 14085000 31709 573 28943 266485;266486;266487;266488;266489;266490;266491;266492;266493;266494;266495 211558;211559;211560;211561;211562;211563 211562 6 LPWETWGSGGEGNSAGGAERPGPMGEAEK Unmodified 2913.2988 0.29878416 1536 P48382 RFX5 DNA-binding protein RFX5 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 75.558 75.807 3 1.0123E-31 87092 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.406 73.608 24682000 0 0 0 0 0 0 0 5315700 0 0 0 0 0 0 19366000 31710 1536 28944 266496;266497 211564;211565 211564 2 LPWSNPLK Unmodified 953.53345 0.53345218 4176 Q9BV44 THUMPD3 THUMP domain-containing protein 3 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.314 71.387 2 0.030437 81292 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.531 27.424 51036000 0 0 0 2818900 2386500 3846900 3308300 4066300 2489900 3729000 4543000 6371300 3259700 5719600 8496700 31711 4176 28945 266498;266499;266500;266501;266502;266503;266504;266505;266506;266507;266508;266509 211566;211567 211566 2 LPYDVTPEQALAHEEVK Unmodified 1937.9735 0.97345748 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.5 3.98 1 5 1 9 2 4 1 1 1 1 1 1 1 1 1 1 77.671 76.577 3 5.4829E-58 92803 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 135.09 117.69 11140000000 197590000 6690700000 265870000 0 315120000 798480000 0 370580000 332540000 523780000 399800000 0 278920000 311150000 655580000 31712 1518 28946 266510;266511;266512;266513;266514;266515;266516;266517;266518;266519;266520;266521;266522;266523;266524;266525 211568;211569;211570;211571;211572;211573;211574;211575;211576;211577;211578;211579;211580;211581;211582;211583;211584;211585 211572 14 LPYEDVAIPLNELPEPEQDNGGTTESVK Unmodified 3053.4717 0.47170595 4122 Q9BS18 ANAPC13 Anaphase-promoting complex subunit 13 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 91.621 87.559 3 2.7579E-06 108706 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 42.329 35.998 45642000 0 45642000 0 0 0 0 0 0 0 0 0 0 0 0 0 31713 4122 28947 266526;266527 211586;211587;211588 211586 3 LPYSTFR Unmodified 882.45995 0.45995289 255 O15119;Q13207 TBX3;TBX2 T-box transcription factor TBX3;T-box transcription factor TBX2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.666 48.825 2 0.024381 54733 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 82.913 25.578 309000000 0 0 0 14774000 20619000 19074000 21104000 26391000 21740000 23449000 33111000 42203000 27226000 26696000 32611000 31714 255 28948 266528;266529;266530;266531;266532;266533;266534;266535;266536;266537;266538;266539 211589;211590;211591 211591 3 LPYTEGDAQQLQRK Unmodified 1645.8424 0.84238373 1523 P47736 RAP1GAP Rap1 GTPase-activating protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 46.103 41.414 3 0.037147 52061 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 45.347 32.514 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31715 1523 28949 266540;266541 211592;211593 211593 2 LQAAFSLEK Unmodified 1005.5495 0.54949617 5281 Q9Y6G5 COMMD10 COMM domain-containing protein 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8 3.46 3 9 1 1 1 1 1 1 1 1 1 1 1 1 60.008 58.722 2 0.033753 78649 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.485 28.851 224040000 6273200 121420000 4467200 0 0 0 7238200 7023200 8367600 9390500 12519000 15177000 9401700 8223100 14540000 31716 5281 28950 266542;266543;266544;266545;266546;266547;266548;266549;266550;266551;266552;266553 211594;211595 211595 2 LQAAGAALGDVSER Unmodified 1356.6997 0.69974224 3516 Q8TEH3 DENND1A DENN domain-containing protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 50.584 50.898 2 0.00057301 57492 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 66.617 24.018 689800000 0 0 0 0 0 116820000 76745000 0 0 0 109390000 240700000 146140000 0 0 31717 3516 28951 266554;266555;266556;266557;266558 211596;211597;211598;211599;211600 211597 4 LQAAGNAVK Unmodified 870.49232 0.49231565 5187;5201 Q9Y490;Q9Y4G6 TLN1;TLN2 Talin-1;Talin-2 no no 0 0 0 By MS/MS 10 0 1 1 28.764 28.797 2 0.035799 31296 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 45.952 1.4209 5482900 0 0 0 0 0 0 5482900 0 0 0 0 0 0 0 0 31718 5187;5201 28952 266559 211601 211601 1 LQAALAER Unmodified 870.49232 0.49231565 2583 Q15814 TBCC Tubulin-specific chaperone C yes yes 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 28.52 28.703 2 0.013883 30520 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 71.379 15.938 64930000 0 0 0 5408800 4291600 6478700 0 5156500 3998800 7621900 10802000 9813400 0 0 11358000 31719 2583 28953 266560;266561;266562;266563;266564;266565;266566;266567;266568 211602 211602 1 LQAALDDEEAGGRPAMEPGNGSLDLGGDSAGR Oxidation (M) 3141.4269 0.4268978 2046 Q00839 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.852 65.935 3 0 75751 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 243.24 240.27 8351100000 0 0 0 312670000 628340000 686140000 554490000 465640000 610890000 840690000 929300000 1167300000 779400000 666230000 709980000 31720 2046 28954 266569;266570;266571;266572;266573;266574;266575;266576;266577;266578;266579;266580 211603;211604;211605;211606;211607;211608;211609;211610;211611;211612;211613;211614;211615;211616;211617;211618;211619;211620;211621;211622;211623;211624 211623 3310 22 LQAALDDEEAGGRPAMEPGNGSLDLGGDSAGR Unmodified 3125.432 0.43198317 2046 Q00839 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 1 2 2 2 2 2 2 2 2 2 3 2 72.907 72.998 3;4 6.823E-212 83515 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 197.01 191.41 3851900000 0 0 0 67159000 265350000 260380000 100850000 229800000 251580000 464220000 435040000 462130000 270620000 357060000 687700000 31721 2046 28954 266581;266582;266583;266584;266585;266586;266587;266588;266589;266590;266591;266592;266593;266594;266595;266596;266597;266598;266599;266600;266601;266602;266603;266604 211625;211626;211627;211628;211629;211630;211631;211632;211633;211634;211635;211636;211637;211638;211639;211640;211641;211642 211629 14 LQAANAEDIK Unmodified 1071.556 0.55603811 2082 Q02818 NUCB1 Nucleobindin-1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 28.928 28.454 2 2.3483E-08 36249 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 155.07 102.35 279670000 0 123150000 0 8341400 8775500 5989400 9765300 7760800 6738000 10796000 20516000 23578000 11597000 14342000 28320000 31722 2082 28955 266605;266606;266607;266608;266609;266610;266611;266612;266613;266614;266615;266616;266617;266618 211643;211644;211645;211646;211647;211648;211649 211644 7 LQAANDSVCR Unmodified 1132.5295 0.52950579 3501 Q8TDH9 BLOC1S5 Biogenesis of lysosome-related organelles complex 1 subunit 5 yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 17.685 17.971 2 0.035327 17745 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 67.993 49.957 18606000 0 0 0 0 1259400 0 0 0 1385300 1941800 3145800 4375600 0 1826500 4671300 31723 3501 28956 266619;266620;266621;266622;266623;266624;266625 211650 211650 0 LQAATDVLDQK Unmodified 1200.635 0.63501672 5330 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 7.44 3.62 2 1 6 1 1 1 1 1 1 1 1 1 10.61 9.7217 2;3 0.0038318 8316 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.741 5.4332 + 1632500000 23825000 36137000 2867800 0 0 0 0 53461000 61320000 0 924040 859450000 593840000 0 633800 31724 5330 28957 266626;266627;266628;266629;266630;266631;266632;266633;266634 211651;211652;211653;211654;211655;211656 211656 3 LQAAVDGPMDK Oxidation (M) 1159.5543 0.55432356 1660 P51572 BCAP31 B-cell receptor-associated protein 31 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 25.345 25.162 2 0.0002271 26434 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 88.496 74.338 104930000 0 18270000 0 4928300 10689000 7991000 10263000 5123100 10421000 5814400 7594800 7495800 9509600 0 6828100 31725 1660 28958 266635;266636;266637;266638;266639;266640;266641;266642;266643;266644;266645;266646 211657;211658;211659;211660;211661;211662;211663;211664;211665;211666;211667;211668 211666 2670 11 LQAAVDGPMDK Unmodified 1143.5594 0.55940893 1660 P51572 BCAP31 B-cell receptor-associated protein 31 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 37.954 38.135 2 6.6236E-05 40962 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 132.01 110.71 312630000 0 0 0 16912000 20744000 18345000 18621000 26567000 16383000 27052000 36374000 35853000 29867000 23097000 42813000 31726 1660 28958 266647;266648;266649;266650;266651;266652;266653;266654;266655;266656;266657;266658;266659 211669;211670;211671;211672;211673;211674;211675;211676;211677 211675 9 LQAAYAGDK Unmodified 935.47125 0.47124585 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 17.909 18.447 2 0.018165 17705 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.064 17.418 31454000 0 0 0 0 0 0 0 0 0 0 9928200 0 0 0 21526000 31727 2047 28959 266660;266661 211678;211679 211678 1 LQADPKPISPQQK Unmodified 1448.7987 0.798728 457 O75128 COBL Protein cordon-bleu yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 28.188 28.402 3 0.022569 30040 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 24.929 14.576 62089000 0 0 0 0 8103700 0 6909800 5456500 3041300 4992700 9350100 11435000 8155800 4644600 0 31728 457 28960 266662;266663;266664;266665;266666;266667;266668;266669;266670 211680;211681;211682;211683 211683 4 LQAEADDLQIREGK Unmodified 1584.8107 0.81074925 2155 Q08378 GOLGA3 Golgin subfamily A member 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 4.25 3.34 2 1 1 2 1 1 48.053 44.542 3 0.0028632 57674 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 59.864 39.131 48795000 0 32784000 4477500 0 0 0 0 0 0 0 11533000 0 0 0 0 31729 2155 28961 266671;266672;266673;266674 211684;211685;211686;211687 211684 4 LQAEAPHIVVGTPGR Unmodified 1543.8471 0.84707518 2396 Q14240 EIF4A2 Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 57.655 57.999 3 0.00083472 65742 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.899 29.056 41290000 0 0 0 0 0 9877600 0 0 0 0 0 11207000 0 7050100 13155000 31730 2396 28962 266675;266676;266677;266678;266679 211688;211689;211690;211691;211692 211692 5 LQAEAQQLR Unmodified 1055.5724 0.57235688 2612 Q16543 CDC37 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 26.985 27.081 2 0.0034522 27777 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 94.302 37.125 52638000 0 0 0 0 5307700 9812900 6303400 0 5306000 0 16023000 0 0 9885100 0 31731 2612 28963 266680;266681;266682;266683;266684;266685 211693;211694;211695;211696;211697 211696 5 LQAEAQQLRK Unmodified 1183.6673 0.6673199 2612 Q16543 CDC37 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.68 1.57 1 24 1 2 2 2 2 2 2 2 2 2 2 2 2 19.463 19.537 2;3 0.0027258 19422 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 102.06 52.711 1267900000 0 0 6330200 73362000 38353000 78494000 71197000 53559000 43103000 115100000 155210000 159520000 81670000 107500000 284520000 31732 2612 28964 266686;266687;266688;266689;266690;266691;266692;266693;266694;266695;266696;266697;266698;266699;266700;266701;266702;266703;266704;266705;266706;266707;266708;266709;266710 211698;211699;211700;211701;211702;211703;211704;211705;211706;211707;211708;211709;211710;211711;211712 211709 7 LQAEEVAQQK Unmodified 1142.5932 0.5931519 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 2 1 1 1 22.962 23.199 2 0.00092309 24324 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 113.5 70.319 228650000 0 0 0 20759000 15579000 13590000 14715000 15679000 9663800 17022000 15968000 48854000 19590000 15266000 21959000 31733 2501 28965 266711;266712;266713;266714;266715;266716;266717;266718;266719;266720;266721;266722;266723 211713;211714;211715;211716;211717;211718;211719;211720;211721;211722 211719 9 LQAEIDNIK Unmodified 1042.5659 0.56587452 69;88 CON__P08729;CON__Q3KNV1;P08729 KRT7 Keratin, type II cytoskeletal 7 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 2 1 1 1 1 1 1 1 1 1 1 1 44.514 44.635 2 2.406E-20 51349 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 175.38 119.85 + 993910000 0 0 0 60862000 67977000 88394000 83063000 70740000 57309000 85091000 98662000 120190000 82052000 75663000 103900000 31734 69;88 28966 266724;266725;266726;266727;266728;266729;266730;266731;266732;266733;266734;266735;266736 211723;211724;211725;211726;211727;211728;211729;211730;211731;211732;211733;211734;211735;211736 211736 12 LQAEIEGLK Unmodified 999.56006 0.56006086 67 CON__P05787;P05787 KRT8 Keratin, type II cytoskeletal 8 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.18 3.29 3 1 13 1 2 1 1 1 2 1 1 1 1 1 1 1 1 1 51.823 51.971 2 0.0031256 58504 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 91.069 32.254 + 12171000000 0 0 0 674590000 991720000 1266000000 832940000 921770000 682960000 1066500000 1067300000 1412200000 1138300000 894170000 1222100000 31735 67 28967 266737;266738;266739;266740;266741;266742;266743;266744;266745;266746;266747;266748;266749;266750;266751;266752;266753 211737;211738;211739;211740;211741;211742;211743;211744;211745;211746;211747;211748;211749;211750;211751;211752;211753;211754;211755;211756;211757;211758;211759 211739 23 LQAEISNVK Unmodified 1000.5553 0.55530983 103 CON__Q7Z794;Q7Z794 KRT77 Keratin, type II cytoskeletal 1b yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.3 34.483 2 0.00085161 37761 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 143.89 72.509 + 559750000 0 0 0 113980000 20576000 43177000 37002000 37860000 23502000 75694000 31783000 93164000 33692000 29504000 19810000 31736 103 28968 266754;266755;266756;266757;266758;266759;266760;266761;266762;266763;266764;266765 211760;211761;211762;211763;211764;211765;211766;211767;211768;211769;211770;211771 211761 12 LQAEISQAAR Unmodified 1085.5829 0.58292157 323 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.988 32.175 2 0.00089677 34900 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 116.73 46.205 335710000 0 0 0 20786000 23776000 29583000 20008000 21238000 19109000 27537000 31282000 42204000 30644000 25575000 43971000 31737 323 28969 266766;266767;266768;266769;266770;266771;266772;266773;266774;266775;266776;266777 211772;211773;211774;211775;211776;211777;211778;211779;211780;211781;211782;211783;211784 211778 10 LQAEISQAARK Unmodified 1213.6779 0.67788459 323 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 6 21 2 2 2 1 1 1 2 2 2 2 2 2 2 2 2 25.249 24.481 2;3 0.00018512 26056 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 120.99 58.33 848110000 384530000 50364000 50878000 22701000 17461000 27172000 34102000 33033000 30640000 29491000 25568000 40227000 28042000 26733000 47173000 31738 323 28970 266778;266779;266780;266781;266782;266783;266784;266785;266786;266787;266788;266789;266790;266791;266792;266793;266794;266795;266796;266797;266798;266799;266800;266801;266802;266803;266804 211785;211786;211787;211788;211789;211790;211791;211792;211793;211794;211795;211796;211797;211798;211799;211800;211801;211802;211803 211787 12 LQAELDHLRK Unmodified 1221.683 0.68296996 2434 Q14687 GSE1 Genetic suppressor element 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 33.544 33.849 3 0.013318 37252 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 32.254 20.686 55297000 0 0 0 0 0 4141400 2967100 5641100 4223700 4998200 4752000 6887300 6000700 5668000 10017000 31739 2434 28971 266805;266806;266807;266808;266809;266810;266811;266812;266813;266814 211804;211805 211804 2 LQAELEEMAK Oxidation (M) 1176.5696 0.56963927 1627 P50542 PEX5 Peroxisomal targeting signal 1 receptor yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 37.701 32.917 2 0.0051908 42858 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.213 53.958 30488000 0 30488000 0 0 0 0 0 0 0 0 0 0 0 0 0 31740 1627 28972 266815;266816 211806 211806 2608 1 LQAELEEMAK Unmodified 1160.5747 0.57472465 1627 P50542 PEX5 Peroxisomal targeting signal 1 receptor yes yes 0 0 0 By MS/MS 2 0 1 1 58.903 53.06 2 0.00035863 68297 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.18 83.925 142690000 0 142690000 0 0 0 0 0 0 0 0 0 0 0 0 0 31741 1627 28972 266817 211807 211807 1 LQAELQGAVR Unmodified 1083.6037 0.60365701 463 O75150 RNF40 E3 ubiquitin-protein ligase BRE1B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 42.367 42.682 2 0.0040383 47381 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 74.301 11.728 157700000 0 0 0 0 0 19230000 18086000 0 12971000 17517000 0 23450000 22567000 18517000 25361000 31742 463 28973 266818;266819;266820;266821;266822;266823;266824;266825 211808;211809;211810;211811 211809 3 LQAENDASK Unmodified 974.46689 0.46688876 1328 P33176 KIF5B Kinesin-1 heavy chain yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 6.4418 6.6001 2 0.00387 4342 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 100.02 20.901 16487000 0 0 0 0 0 4033400 903070 2914400 2419600 934010 0 1647600 874980 704330 2055500 31743 1328 28974 266826;266827;266828;266829;266830;266831;266832;266833;266834 211812;211813 211812 2 LQAENDASKEEVK Unmodified 1459.7155 0.71545188 1328 P33176 KIF5B Kinesin-1 heavy chain yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 15.34 15.505 3 0.010708 15180 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 39.878 14.178 74791000 0 0 0 5347900 3954700 1919300 5281700 3796200 2028800 3009600 13918000 17587000 0 6148600 11800000 31744 1328 28975 266835;266836;266837;266838;266839;266840;266841;266842;266843;266844;266845 211814;211815;211816 211816 3 LQAENLQLR Unmodified 1083.6037 0.60365701 5126 Q9Y2X7 GIT1 ARF GTPase-activating protein GIT1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 49.191 49.291 2 0.008867 55540 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 68.383 7.9462 111530000 0 0 0 9663900 8713000 3449100 9112500 9595500 0 12271000 16132000 0 17635000 11235000 13720000 31745 5126 28976 266846;266847;266848;266849;266850;266851;266852;266853;266854;266855 211817;211818;211819 211818 3 LQAENLQLRQPPGPVPTPPLPSER Unmodified 2633.4289 0.42893411 5126 Q9Y2X7 GIT1 ARF GTPase-activating protein GIT1 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 79.594 79.727 3 1.1231E-09 92148 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 62.082 55.787 23886000 0 0 0 0 0 3716100 0 0 0 5761000 5197300 0 0 0 9211900 31746 5126 28977 266856;266857;266858;266859 211820;211821;211822 211820 3 LQAERDALILK Unmodified 1268.7452 0.74523587 4615 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 51.779 51.765 3 0.0099806 58311 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 36.982 20.844 25900000 0 0 0 0 2630800 9157000 3447800 0 4785700 5879100 0 0 0 0 0 31747 4615 28978 266860;266861;266862;266863;266864 211823 211823 1 LQAESESAATR Unmodified 1161.5626 0.56258006 3838 Q96FS4 SIPA1 Signal-induced proliferation-associated protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.139 14.301 2 0.0043129 13344 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 61.78 21.511 35111000 0 0 0 1313700 1737000 2022000 2205400 1328200 1522800 4053300 3768100 3444400 3593200 3072200 7050900 31748 3838 28979 266865;266866;266867;266868;266869;266870;266871;266872;266873;266874;266875;266876 211824;211825;211826;211827;211828;211829 211827 6 LQAETEELEEEK Unmodified 1446.6726 0.67258402 1021 P15408 FOSL2 Fos-related antigen 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 39.903 39.672 2 8.0687E-09 43782 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 140.49 111.4 189970000 0 18070000 0 17320000 7771300 10291000 10644000 10515000 8990300 15747000 18462000 16550000 14519000 11194000 29896000 31749 1021 28980 266877;266878;266879;266880;266881;266882;266883;266884;266885;266886;266887;266888;266889 211830;211831;211832;211833;211834;211835;211836;211837;211838;211839;211840;211841;211842;211843 211840 14 LQAFGFCEYK Unmodified 1261.5801 0.58014438 1596 P49756 RBM25 RNA-binding protein 25 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 72.478 72.665 2 0.012252 83611 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 72.325 61.615 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31750 1596 28981 266890;266891;266892;266893 211844;211845;211846;211847 211846 4 LQAFGFCEYKEPESTLR Unmodified 2073.983 0.98297631 1596 P49756 RBM25 RNA-binding protein 25 yes yes 0 0 1 By MS/MS By matching 10 0 2 1 1 75.371 75.532 3 0.001296 86993 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 48.314 38.784 25541000 0 0 0 0 0 0 0 16031000 0 0 0 0 0 9509900 0 31751 1596 28982 266894;266895 211848 211848 1 LQAFSAAIESCNK Unmodified 1437.6922 0.69221402 2080 Q02790 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.11 3.8 6 1 12 1 4 2 1 1 1 1 1 1 1 1 1 1 1 1 61.393 59.879 2 2.1071E-13 77197 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 159.12 118.4 2949800000 245890000 2304800000 92535000 12830000 9394400 19116000 15157000 13114000 13001000 19811000 32307000 46360000 21307000 31249000 72869000 31752 2080 28983 266896;266897;266898;266899;266900;266901;266902;266903;266904;266905;266906;266907;266908;266909;266910;266911;266912;266913;266914 211849;211850;211851;211852;211853;211854;211855;211856;211857;211858;211859;211860;211861;211862;211863;211864;211865;211866;211867;211868;211869;211870;211871;211872 211855 22 LQAGDAPSVGGSCR Unmodified 1373.6358 0.63576177 3432 Q8NEY1 NAV1 Neuron navigator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 30.869 31.062 2 0.00031817 33652 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 78.548 63.874 87473000 0 0 0 0 7685400 8199600 8897300 0 9640600 10919000 8385700 0 14424000 8763300 10557000 31753 3432 28984 266915;266916;266917;266918;266919;266920;266921;266922;266923;266924 211873;211874;211875;211876;211877;211878;211879;211880;211881;211882 211881 10 LQAGEETASHYR Unmodified 1360.6371 0.63714198 4833 Q9UBB6 NCDN Neurochondrin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.632 20.822 3 0.000231 21675 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 67.456 45.411 149870000 0 0 0 7452600 9772100 16368000 13049000 10456000 7755100 14815000 12934000 20785000 0 16724000 19763000 31754 4833 28985 266925;266926;266927;266928;266929;266930;266931;266932;266933;266934;266935;266936 211883;211884;211885;211886;211887;211888;211889;211890;211891;211892;211893;211894;211895 211894 13 LQAGEYVSLGK Unmodified 1163.6186 0.61863837 403;670 O95573;O60488 ACSL3;ACSL4 Long-chain-fatty-acid--CoA ligase 3;Long-chain-fatty-acid--CoA ligase 4 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 2 16 1 1 1 1 2 2 1 2 1 2 1 1 1 1 56.452 56.038 2 1.9544E-05 63311 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 127.4 60.365 876860000 0 367260000 2680100 14253000 30031000 56619000 45184000 33894000 45186000 45405000 60888000 61536000 31132000 33654000 49139000 31755 670;403 28986 266937;266938;266939;266940;266941;266942;266943;266944;266945;266946;266947;266948;266949;266950;266951;266952;266953;266954 211896;211897;211898;211899;211900;211901;211902;211903;211904;211905;211906;211907;211908;211909 211901 13 LQAIAEK Unmodified 771.44905 0.44905385 538 O75781;Q8IXS6 PALM;PALM2 Paralemmin-1;Paralemmin-2 yes no 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 12.519 12.72 2 0.026498 10301 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 78.616 0 168030000 0 0 0 0 0 0 0 0 0 87697000 0 0 0 80338000 0 31756 538 28987 266955;266956 211910;211911 211911 2 LQAITASSANLR Unmodified 1243.6884 0.68844927 5109 Q9Y2K7 KDM2A Lysine-specific demethylase 2A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 50.086 50.109 2 2.4923E-05 56565 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 93.111 47.95 37734000 0 0 0 3379300 4066500 0 3992500 4671800 0 6000100 5161600 0 5630100 4831800 0 31757 5109 28988 266957;266958;266959;266960;266961;266962;266963;266964 211912;211913;211914;211915;211916;211917;211918;211919;211920 211912 9 LQALAEEPSQPHTR Unmodified 1575.8005 0.80051892 2819 Q5VV41 ARHGEF16 Rho guanine nucleotide exchange factor 16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.01 36.19 3 0.0028295 38778 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.614 25.233 118910000 0 0 0 6655800 4888100 8932600 7167600 7546200 6498200 11844000 13576000 12332000 10509000 9202500 19760000 31758 2819 28989 266965;266966;266967;266968;266969;266970;266971;266972;266973;266974;266975;266976 211921;211922;211923;211924;211925;211926;211927;211928;211929;211930;211931 211925 11 LQALAEEPSQPHTRSPAK Unmodified 1959.0174 0.017387984 2819 Q5VV41 ARHGEF16 Rho guanine nucleotide exchange factor 16 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 38.444 33.44 3 1.4807E-55 46525 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 152.37 145.89 133290000 128490000 0 4799200 0 0 0 0 0 0 0 0 0 0 0 0 31759 2819 28990 266977;266978 211932;211933;211934;211935 211933 4 LQALANEQAAAAHELEK Unmodified 1805.9272 0.92717599 3151 Q86UP2 KTN1 Kinectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 5.4 3.77 2 1 2 2 1 1 1 61.107 58.448 3 0.00018702 75691 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 61.096 50.629 157840000 0 114710000 16184000 0 0 0 0 0 0 0 0 13295000 0 0 13644000 31760 3151 28991 266979;266980;266981;266982;266983 211936;211937;211938;211939;211940;211941 211936 6 LQALDTGWNELHK Unmodified 1523.7732 0.77324153 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 67.622 67.835 3 0.00051717 76964 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 58.487 44.523 135610000 0 0 0 0 0 13604000 3770100 13898000 7653700 12124000 15488000 19281000 10454000 10712000 28630000 31761 2047 28992 266984;266985;266986;266987;266988;266989;266990;266991;266992;266993 211942;211943;211944;211945;211946;211947;211948;211949 211948 4 LQALEATCK Unmodified 1032.5274 0.52738052 3377 Q8N9N5 BANP Protein BANP yes yes 0 0 0 By MS/MS 2 0 1 1 34.561 29.805 2 0.0040042 39123 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.54 48.995 15427000 0 15427000 0 0 0 0 0 0 0 0 0 0 0 0 0 31762 3377 28993 266994 211950 211950 0 LQALLEK Unmodified 813.496 0.49600404 4370 Q9H2M9 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 46.954 41.438 2 0.017113 54053 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.16 0 124970000 4855300 115670000 4449800 0 0 0 0 0 0 0 0 0 0 0 0 31763 4370 28994 266995;266996;266997;266998 211951;211952;211953;211954 211952 4 LQALLGDNEK Unmodified 1099.5873 0.58733824 3422 Q8NEB9 PIK3C3 Phosphatidylinositol 3-kinase catalytic subunit type 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 45.235 44.722 2 0.0099222 50637 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 56.916 24.596 5856500 0 0 0 0 5856500 0 0 0 0 0 0 0 0 0 0 31764 3422 28995 266999;267000;267001 211955;211956;211957 211957 3 LQALQEK Unmodified 828.47052 0.47051757 3380 Q8N9Q2 SREK1IP1 Protein SREK1IP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 20.067 20.239 2 0.023364 20795 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 89.123 25.821 68721000 0 0 0 6453500 5880400 6954700 7237700 4321400 4657900 7104800 0 9030300 4658700 4712100 7709100 31765 3380 28996 267002;267003;267004;267005;267006;267007;267008;267009;267010;267011;267012 211958;211959;211960;211961;211962;211963 211962 6 LQALTGNEGR Unmodified 1057.5516 0.55162144 2875 Q6FI81 CIAPIN1 Anamorsin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 26.618 26.465 2 0.0019022 28031 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 100.02 23.171 192550000 0 15907000 0 7996400 8469000 26022000 13993000 9345200 7275200 18996000 16758000 17126000 12139000 13298000 25225000 31766 2875 28997 267013;267014;267015;267016;267017;267018;267019;267020;267021;267022;267023;267024;267025 211964;211965;211966;211967;211968;211969;211970;211971;211972;211973;211974;211975;211976 211970 13 LQALTGNEGRVSVENIK Unmodified 1826.985 0.98502522 2875 Q6FI81 CIAPIN1 Anamorsin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 5 2 1 2 64.749 58.721 2;3 3.0903E-06 76091 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.697 37.901 356660000 244540000 0 112120000 0 0 0 0 0 0 0 0 0 0 0 0 31767 2875 28998 267026;267027;267028;267029;267030 211977;211978;211979;211980;211981 211977 5 LQANGPVAK Unmodified 896.50797 0.50796571 2458 Q14978 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 16.067 15.956 2 0.0030241 16157 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 91.626 59.156 1290700000 0 321800000 0 46524000 44156000 59825000 58478000 45088000 33704000 87559000 118600000 150030000 107290000 95820000 121790000 31768 2458 28999 267031;267032;267033;267034;267035;267036;267037;267038;267039;267040;267041;267042;267043 211982;211983;211984;211985;211986;211987;211988;211989;211990;211991;211992;211993;211994;211995;211996;211997;211998 211982 14 LQANWNR Unmodified 900.4566 0.45659884 3301 Q8N0X7 SPG20 Spartin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 29.233 29.428 2 0.023354 31967 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 89.703 68.844 191110000 0 0 0 10092000 11005000 13383000 13137000 20688000 11361000 0 16760000 21554000 23972000 15336000 33825000 31769 3301 29000 267044;267045;267046;267047;267048;267049;267050;267051;267052;267053;267054 211999;212000;212001;212002;212003;212004;212005;212006;212007;212008 211999 10 LQANWNRAEEENEFQIPGR Unmodified 2300.0934 0.093406473 3301 Q8N0X7 SPG20 Spartin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 72.749 72.868 3 7.7926E-47 83329 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.77 106.13 207910000 0 0 0 0 6370300 22354000 0 24922000 15355000 19807000 11808000 29313000 10555000 14139000 53286000 31770 3301 29001 267055;267056;267057;267058;267059;267060;267061;267062;267063;267064 212009;212010;212011;212012;212013;212014;212015;212016;212017;212018;212019 212012 11 LQAPDSATLLEK Unmodified 1284.6925 0.6925316 4164 Q9BUL5 PHF23 PHD finger protein 23 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.489 62.584 2 0.0013673 71327 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 80.037 60.25 115390000 0 0 0 6466400 5319500 6456800 7716900 9689800 6361700 11074000 11504000 13131000 8065900 8684400 20917000 31771 4164 29002 267065;267066;267067;267068;267069;267070;267071;267072;267073;267074;267075;267076 212020;212021;212022;212023;212024;212025;212026;212027;212028;212029;212030 212028 11 LQAQEEQHQEVQK Unmodified 1593.7747 0.7746981 3964 Q96R06 SPAG5 Sperm-associated antigen 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 1 2 2 2 2 12.182 12.316 2;3 5.9341E-08 11499 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 77.279 61.014 257550000 0 0 0 15063000 12863000 28015000 16974000 18101000 15296000 25752000 17797000 30695000 25770000 20021000 31197000 31772 3964 29003 267077;267078;267079;267080;267081;267082;267083;267084;267085;267086;267087;267088;267089;267090;267091;267092;267093;267094;267095;267096;267097;267098;267099 212031;212032;212033;212034;212035;212036;212037;212038;212039;212040;212041;212042;212043;212044 212032 11 LQAQLEESK Unmodified 1044.5451 0.54513908 3595 Q8WXW3 PIBF1 Progesterone-induced-blocking factor 1 yes yes 0 0 0 By MS/MS 10 0 1 1 24.172 24.84 2 0.045687 25334 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.35 14.955 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31773 3595 29004 267100 212045 212045 1 LQAQLNELQAQLSQK Unmodified 1710.9264 0.92644771 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 2 2 2 2 2 2 76.359 76.467 2;3 6.1362E-19 88360 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 133.32 110.44 146380000 0 0 0 0 8140600 9540000 8643200 12754000 9050800 16860000 15377000 23787000 10642000 8580600 23008000 31774 2459 29005 267101;267102;267103;267104;267105;267106;267107;267108;267109;267110;267111;267112;267113;267114;267115;267116;267117;267118;267119;267120;267121;267122 212046;212047;212048;212049;212050;212051;212052;212053;212054;212055;212056;212057;212058;212059 212053 12 LQAQNIQQR Unmodified 1097.5942 0.59415496 4955 Q9UK61 FAM208A Protein FAM208A yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 19.031 19.637 2 0.050085 19087 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.109 31.417 6906000 0 0 0 0 0 0 0 0 0 0 0 3483600 0 0 3422400 31775 4955 29006 267123;267124 212060 212060 1 LQAQQDAVNIVCHSK Unmodified 1709.8519 0.85190256 1752 P55036 PSMD4 26S proteasome non-ATPase regulatory subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 2 2 2 1 1 1 50.14 50.449 2;3 3.3017E-41 56845 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 193.62 176.15 1150000000 0 0 0 0 70496000 90062000 0 0 0 163360000 326490000 300850000 44299000 64152000 90270000 31776 1752 29007 267125;267126;267127;267128;267129;267130;267131;267132;267133;267134;267135 212061;212062;212063;212064;212065;212066;212067;212068;212069;212070;212071;212072;212073;212074;212075;212076;212077;212078 212068 18 LQAQRNELNAK Unmodified 1283.6946 0.69459728 1876 P62195 PSMC5 26S protease regulatory subunit 8 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 15.042 15.203 3 0.0024752 14325 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 63.32 29.454 90984000 0 0 0 0 8946100 0 0 0 0 19288000 62749000 0 0 0 0 31777 1876 29008 267136;267137;267138;267139 212079;212080;212081;212082 212080 3 LQAQSLSTVGPR Unmodified 1255.6884 0.68844927 312 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 46.344 46.391 2 0.0092782 51611 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.064 25.878 88509000 0 0 0 12898000 9611800 0 10580000 0 0 0 0 18322000 24961000 12137000 0 31778 312 29009 267140;267141;267142;267143;267144;267145 212083 212083 1 LQAQVTLSNAQLK Unmodified 1412.7987 0.798728 2479 Q15025 TNIP1 TNFAIP3-interacting protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 65.721 59.804 2 0.010254 76584 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.412 20.993 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31779 2479 29010 267146 212084 212084 1 LQARLLEEESSK Unmodified 1401.7464 0.74635808 4890 Q9UH65 SWAP70 Switch-associated protein 70 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 49.171 43.25 3 4.5415E-13 60539 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.98 83.637 130840000 119210000 0 11621000 0 0 0 0 0 0 0 0 0 0 0 0 31780 4890 29011 267147;267148 212085;212086;212087 212086 3 LQASISAFR Unmodified 991.54508 0.5450795 2646 Q27J81 INF2 Inverted formin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 57.739 57.857 2 0.0036942 65639 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 95.815 42.464 237700000 0 0 0 6705200 10446000 22130000 15934000 14655000 17422000 26297000 22849000 32313000 24512000 17560000 26872000 31781 2646 29012 267149;267150;267151;267152;267153;267154;267155;267156;267157;267158;267159;267160 212088;212089;212090;212091;212092;212093;212094;212095;212096;212097;212098;212099 212089 12 LQASLTK Unmodified 759.44905 0.44905385 1406;2357 P39880;Q13948 CUX1 Homeobox protein cut-like 1;Protein CASP no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 21.585 21.749 2 0.02336 22071 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 89.369 11.995 141590000 0 0 0 0 10328000 11958000 17496000 18605000 12154000 19798000 23998000 27255000 0 0 0 31782 1406;2357 29013 267161;267162;267163;267164;267165;267166;267167;267168 212100;212101;212102;212103;212104;212105;212106;212107 212106 8 LQASNVTNK Unmodified 973.51926 0.51925868 4972 Q9UKM9 RALY RNA-binding protein Raly yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 13.206 12.849 2 2.7459E-05 11882 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 139.97 63.936 361210000 0 164470000 0 11872000 12181000 12568000 12799000 11314000 11748000 21453000 16603000 16211000 28827000 23533000 17630000 31783 4972 29014 267169;267170;267171;267172;267173;267174;267175;267176;267177;267178;267179;267180;267181;267182 212108;212109;212110;212111;212112;212113;212114;212115;212116;212117;212118;212119;212120;212121 212114 11 LQATEVR Unmodified 815.45012 0.45011648 4920 Q9UI30 TRMT112 Multifunctional methyltransferase subunit TRM112-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 16.678 16.899 2 0.023384 16835 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 88.029 20.994 382300000 0 0 0 0 0 30002000 54221000 39901000 32672000 40829000 42933000 62474000 42430000 36842000 0 31784 4920 29015 267183;267184;267185;267186;267187;267188;267189;267190;267191 212122;212123;212124;212125;212126;212127;212128 212127 7 LQATLDMQSGIIHAAEEK Oxidation (M) 1969.9779 0.97789093 129 O00231 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.86 3.49 5 1 16 2 2 2 1 2 2 1 1 1 2 1 2 1 1 1 64.644 63.132 3 1.8459E-11 71820 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 87.49 73.472 558750000 25596000 168270000 56284000 9988200 30233000 48140000 7781400 5520300 10001000 67752000 29946000 68366000 6886800 6656600 17334000 31785 129 29016 267192;267193;267194;267195;267196;267197;267198;267199;267200;267201;267202;267203;267204;267205;267206;267207;267208;267209;267210;267211;267212;267213 212129;212130;212131;212132;212133;212134;212135;212136;212137;212138;212139;212140;212141;212142 212137 171 12 LQATLDMQSGIIHAAEEK Unmodified 1953.983 0.98297631 129 O00231 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 2 3 1 80.162 75.604 3 3.7094E-05 92543 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 71.601 59.75 347020000 77391000 262670000 6965900 0 0 0 0 0 0 0 0 0 0 0 0 31786 129 29016 267214;267215;267216;267217;267218;267219 212143;212144;212145;212146 212146 4 LQATMETDDNIR Unmodified 1405.6507 0.65074314 1638 P50851 LRBA Lipopolysaccharide-responsive and beige-like anchor protein yes yes 0 0 0 By MS/MS 10 0 1 1 41.304 42.046 2 0.0057742 45924 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.377 68.352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31787 1638 29017 267220 212147 212147 1 LQAVEVVITHLAPGTK Unmodified 1674.9669 0.96685596 5120 Q9Y2V2 CARHSP1 Calcium-regulated heat stable protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 84.867 83.815 3 1.0593E-10 96726 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.347 85.817 97995000 18242000 0 0 0 0 4177900 0 0 0 4188600 8549300 8514000 0 5372600 48951000 31788 5120 29018 267221;267222;267223;267224;267225;267226;267227 212148;212149;212150;212151;212152;212153 212149 6 LQAVLEDTLLK Unmodified 1241.7231 0.72310344 3082 Q7Z3E2 CCDC186 Coiled-coil domain-containing protein 186 yes yes 0 0 0 By MS/MS 2 0 1 1 85.282 80.539 2 0.018454 100189 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.102 31.185 12100000 0 12100000 0 0 0 0 0 0 0 0 0 0 0 0 0 31789 3082 29019 267228 212154 212154 1 LQAVTDDHIR Unmodified 1166.6044 0.60438529 1262 P30043 BLVRB Flavin reductase (NADPH) yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 21 2 2 2 2 2 2 1 2 2 1 1 2 29.64 29.82 2;3 0.0029838 31713 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 78.149 55.657 466480000 0 0 0 26141000 11830000 14982000 28464000 27200000 17291000 15154000 59260000 61207000 3385500 5307300 196260000 31790 1262 29020 267229;267230;267231;267232;267233;267234;267235;267236;267237;267238;267239;267240;267241;267242;267243;267244;267245;267246;267247;267248;267249 212155;212156;212157;212158;212159;212160 212155 3 LQAYHTQTTPLIEYYR Unmodified 1996.0054 0.005426314 1748 P54819 AK2 Adenylate kinase 2, mitochondrial;Adenylate kinase 2, mitochondrial, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By matching By matching 10 0 4 1 1 1 1 71.338 71.51 3 0.011584 82299 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 32.341 28.363 14968000 0 0 0 0 0 4124100 0 0 0 5243800 0 0 0 1518100 4082300 31791 1748 29021 267250;267251;267252;267253 212161;212162 212161 2 LQCLNESR Unmodified 1018.4866 0.48657834 4298 Q9GZP4 PITHD1 PITH domain-containing protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 20.751 20.599 2 0.011164 21409 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 107.66 71.785 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31792 4298 29022 267254 212163 212163 1 LQDAAEQLK Unmodified 1014.5346 0.53457439 3327 Q8N3X1 FNBP4 Formin-binding protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 27.088 27.106 2 0.0072675 29038 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 72.879 28.158 6049400 0 0 0 0 0 0 6049400 0 0 0 0 0 0 0 0 31793 3327 29023 267255;267256;267257 212164;212165;212166 212165 3 LQDAEIAR Unmodified 914.48214 0.48214489 825 P06703 S100A6 Protein S100-A6 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.87 3.54 4 11 1 1 2 1 1 1 1 1 1 1 1 1 1 1 24.868 23.976 2 0.00020095 24413 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 153.73 70.112 7208500000 50862000 1466900000 24901000 193530000 116130000 0 177150000 147760000 95459000 239360000 934170000 838050000 228910000 732450000 1962800000 31794 825 29024 267258;267259;267260;267261;267262;267263;267264;267265;267266;267267;267268;267269;267270;267271;267272 212167;212168;212169;212170;212171;212172;212173;212174;212175;212176;212177;212178;212179;212180;212181 212170 11 LQDAEIARLMEDLDR Unmodified 1786.8883 0.88834765 825 P06703 S100A6 Protein S100-A6 yes yes 0 0 1 By MS/MS 2 0 1 1 95.938 87.808 3 7.0046E-31 113466 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 106.52 65.8 15027000 15027000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31795 825 29025 267273 212182 212182 1 LQDAEIARLMEDLDRNK Unmodified 2029.0262 0.026238111 825 P06703 S100A6 Protein S100-A6 yes yes 0 0 2 By MS/MS By MS/MS 2.09 0.668 2 6 3 7 4 95.255 91.732 3;4 5.9038E-52 110027 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 145.55 129.91 3074800000 2478600000 596150000 0 0 0 0 0 0 0 0 0 0 0 0 0 31796 825 29026 267274;267275;267276;267277;267278;267279;267280;267281;267282;267283;267284 212183;212184;212185;212186;212187;212188;212189;212190;212191;212192 212191 8 LQDAEIARLMEDLDRNK Oxidation (M) 2045.0212 0.021152733 825 P06703 S100A6 Protein S100-A6 yes yes 0 1 2 By MS/MS By MS/MS 2.22 0.629 1 5 3 6 3 83.194 78.465 3;4 3.7799E-08 90386 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 103.39 65.294 812970000 576210000 236760000 0 0 0 0 0 0 0 0 0 0 0 0 0 31797 825 29026 267285;267286;267287;267288;267289;267290;267291;267292;267293 212193;212194;212195;212196;212197;212198;212199 212193 993 4 LQDAINILK Unmodified 1026.6073 0.6073454 1464 P42704 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 68.936 68.962 2 0.0037093 79742 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 95.909 54.88 85698000 0 0 0 7607400 4391200 12169000 6284500 5560800 5022700 10994000 0 0 6786800 12230000 14652000 31798 1464 29027 267294;267295;267296;267297;267298;267299;267300;267301;267302;267303 212200;212201;212202;212203;212204;212205;212206;212207;212208 212208 9 LQDAYYIFQEMADK Oxidation (M) 1749.792 0.79198764 190 O14579 COPE Coatomer subunit epsilon yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.15 2.41 2 1 24 2 1 2 2 2 2 2 2 2 2 2 2 2 2 78.509 78.17 2 6.7541E-08 90262 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 93.011 81.478 266670000 0 34635000 3183900 11809000 8970900 19040000 11036000 14375000 13411000 24015000 28237000 26816000 20542000 15308000 35290000 31799 190 29028 267304;267305;267306;267307;267308;267309;267310;267311;267312;267313;267314;267315;267316;267317;267318;267319;267320;267321;267322;267323;267324;267325;267326;267327;267328;267329;267330 212209;212210;212211;212212;212213;212214;212215;212216;212217;212218;212219;212220;212221;212222;212223;212224 212217 260 15 LQDAYYIFQEMADK Unmodified 1733.7971 0.79707302 190 O14579 COPE Coatomer subunit epsilon yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.29 2.76 5 1 1 1 3 2 1 92.779 89.068 2;3 2.6553E-14 111806 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 136.27 128.2 263440000 18841000 235600000 5170900 0 0 0 0 0 0 0 0 0 0 0 3821600 31800 190 29028 267331;267332;267333;267334;267335;267336;267337 212225;212226;212227;212228;212229 212229 4 LQDDSEMLPK Oxidation (M) 1190.5489 0.54890383 448 O60934 NBN Nibrin yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 31.84 31.875 2 0.015251 35066 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 45.68 34.317 28974000 0 0 0 3190300 2770500 4356300 3622200 2563500 5891100 0 0 0 0 0 6579800 31801 448 29029 267338;267339;267340;267341;267342;267343;267344 212230 212230 570 1 LQDDSVETVTSIEQAK Unmodified 1761.8632 0.86323833 1568 P49356 FNTB Protein farnesyltransferase subunit beta yes yes 0 0 0 By MS/MS 10 0 1 1 62.576 63.148 2 0.00075025 71474 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.14 45.508 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31802 1568 29030 267345 212231 212231 1 LQDEANYHLYGSR Unmodified 1564.727 0.72701962 2313 Q13546 RIPK1 Receptor-interacting serine/threonine-protein kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.769 42.945 3 5.1462E-05 47491 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 86.467 57.126 355820000 0 0 0 17711000 15441000 37936000 26054000 21847000 24367000 25310000 53366000 30059000 33908000 23285000 46530000 31803 2313 29031 267346;267347;267348;267349;267350;267351;267352;267353;267354;267355;267356;267357 212232;212233;212234;212235;212236;212237;212238;212239;212240;212241;212242;212243;212244;212245 212243 14 LQDEEASMGASYSK Unmodified 1514.6559 0.65588809 4236 Q9BXW9 FANCD2 Fanconi anemia group D2 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 35.214 35.411 2 0.00039459 38018 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.29 50.596 31135000 0 0 0 3457300 2471800 0 0 0 0 5999200 4900900 4960400 0 0 9345600 31804 4236 29032 267358;267359;267360;267361;267362;267363 212246;212247;212248;212249 212247 4 LQDEFENR Unmodified 1049.4778 0.47778779 1974 P78344 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.992 29.187 2 4.2514E-48 31850 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 194.27 170.3 3405400000 0 0 0 174600000 206030000 207240000 237630000 233650000 209240000 280910000 362400000 368640000 327610000 360000000 437490000 31805 1974 29033 267364;267365;267366;267367;267368;267369;267370;267371;267372;267373;267374;267375 212250;212251;212252;212253;212254;212255;212256;212257;212258;212259;212260;212261;212262;212263;212264;212265;212266;212267;212268;212269;212270;212271;212272;212273;212274 212272 25 LQDEFENRTR Unmodified 1306.6266 0.6265773 1974 P78344 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 25.323 25.53 3 0.0027749 26854 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 64.439 48.301 434620000 0 0 0 31355000 28889000 24933000 55779000 46750000 0 36248000 41873000 50687000 27532000 30685000 59886000 31806 1974 29034 267376;267377;267378;267379;267380;267381;267382;267383;267384;267385;267386 212275;212276;212277;212278;212279;212280;212281;212282 212279 1 LQDEGQEAEGEK Unmodified 1331.5841 0.58410336 2783 Q5T764 IFIT1B Interferon-induced protein with tetratricopeptide repeats 1B no no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.467 11.587 2 0.00094924 10600 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 72.2 61.036 29614000 0 0 0 1410800 1697600 1995300 1611900 1669900 1940900 2196700 0 4154700 3878600 3024900 6033000 31807 2783 29035 267387;267388;267389;267390;267391;267392;267393;267394;267395;267396;267397 212283;212284;212285;212286;212287;212288;212289;212290 212287 8 LQDEIQNMK Oxidation (M) 1133.5387 0.53867349 870 P08670 VIM Vimentin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.43 2.06 1 13 1 1 2 1 1 1 1 1 1 1 1 1 1 20.473 20.339 2 1.5107E-21 20753 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 177.78 124.1 6381900000 0 55760000 0 431930000 488530000 535230000 460010000 355970000 411960000 595650000 671310000 868340000 700810000 348490000 457920000 31808 870 29036 267398;267399;267400;267401;267402;267403;267404;267405;267406;267407;267408;267409;267410;267411 212291;212292;212293;212294;212295;212296;212297;212298;212299;212300;212301;212302;212303;212304;212305;212306 212292 1118 16 LQDEIQNMK Unmodified 1117.5438 0.54375887 870 P08670 VIM Vimentin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.2 36.381 2 1.7392E-117 40107 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 242 171.73 9607200000 0 0 0 456120000 597270000 745590000 728880000 683810000 460330000 815570000 860030000 1014100000 881730000 1074700000 1289000000 31809 870 29036 267412;267413;267414;267415;267416;267417;267418;267419;267420;267421;267422;267423 212307;212308;212309;212310;212311;212312;212313;212314;212315;212316;212317;212318 212311 2 LQDEIQNMKEEMAR 2 Oxidation (M) 1765.7975 0.79748373 870 P08670 VIM Vimentin yes yes 0 2 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 23.037 23.271 3 0.00013684 23636 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 78.932 39.927 312530000 0 0 0 38978000 25851000 18037000 0 18120000 0 22136000 31265000 58811000 44711000 28140000 26476000 31810 870 29037 267424;267425;267426;267427;267428;267429;267430;267431;267432;267433 212319;212320;212321;212322;212323;212324;212325 212325 1118;1119 5 LQDEIQNMKEEMAR Oxidation (M) 1749.8026 0.80256911 870 P08670 VIM Vimentin yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 33.52 33.811 3 8.5739E-14 36580 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 110.98 82.439 80265000 0 0 0 12125000 0 0 8418700 0 0 7164300 20917000 14655000 0 8181400 8803800 31811 870 29037 267434;267435;267436;267437;267438;267439;267440 212326;212327;212328;212329;212330;212331;212332 212331 1118;1119 7 LQDEIQNMKEEMAR Unmodified 1733.8077 0.80765448 870 P08670 VIM Vimentin yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 57.473 57.524 3 0.0093658 65902 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 49.216 37.946 82949000 0 0 0 12545000 8993100 0 10814000 7481000 0 8616500 12344000 9638900 12516000 0 0 31812 870 29037 267441;267442;267443;267444;267445;267446;267447;267448 212333 212333 0 LQDELELTR Unmodified 1115.5823 0.58225287 4179 Q9BV73 CEP250 Centrosome-associated protein CEP250 yes yes 0 0 0 By MS/MS 10 0 1 1 35.731 36.198 2 0.046681 39732 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 42.914 14.016 7526800 0 0 0 0 0 0 0 0 0 0 7526800 0 0 0 0 31813 4179 29038 267449 212334 212334 1 LQDFKLDFGNSQGK Unmodified 1595.7944 0.79437091 476 O75223 GGCT Gamma-glutamylcyclotransferase yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 69.82 69.598 3 0.014528 79768 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 35.037 24.915 18982000 0 0 0 9339600 0 0 0 9642800 0 0 0 0 0 0 0 31814 476 29039 267450;267451 212335;212336;212337 212335 3 LQDGLDQYER Unmodified 1235.5782 0.57823012 2771 Q5T2E6 C10orf76 UPF0668 protein C10orf76 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 42.987 42.953 2 0.0012265 48698 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 108.57 74.773 54492000 0 0 0 8690600 8498100 0 8154900 8703900 9127200 0 11317000 0 0 0 0 31815 2771 29040 267452;267453;267454;267455;267456;267457 212338;212339;212340;212341;212342;212343 212342 6 LQDGSIK Unmodified 759.41267 0.41266834 1133 P22061 PCMT1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS 6 4 3 3 2 1 1 1 1 10.427 9.9337 2 0.027727 12944 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.068 17.614 907850000 0 902090000 160160 1755200 896430 0 0 0 0 0 2940500 0 0 0 0 31816 1133 29041 267458;267459;267460;267461;267462;267463 212344;212345 212344 2 LQDILTNSK Unmodified 1030.5659 0.56587452 2689 Q4V328 GRIPAP1 GRIP1-associated protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 42.185 42.74 2 0.0040185 46511 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.582 61.423 36281000 0 0 0 0 0 0 0 0 0 0 8860800 8980500 0 7144700 11295000 31817 2689 29042 267464;267465;267466;267467 212346;212347 212346 2 LQDLATQLQEK Unmodified 1285.6878 0.68778057 463 O75150 RNF40 E3 ubiquitin-protein ligase BRE1B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 54.268 54.314 2 0.00063756 61580 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 91.584 57.787 124130000 0 0 0 11752000 9293300 12557000 16511000 17004000 10806000 0 0 0 13501000 13610000 19095000 31818 463 29043 267468;267469;267470;267471;267472;267473;267474;267475;267476;267477 212348;212349;212350;212351;212352;212353;212354;212355;212356;212357;212358 212349 11 LQDLDTDYGSGYPNDPK Unmodified 1896.8378 0.83775186 540 O75792 RNASEH2A Ribonuclease H2 subunit A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 56.927 56.394 2 1.9477E-18 65028 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 122.45 116.6 118870000 0 43887000 0 5091900 4742800 6244100 6236900 0 0 7387800 9456300 0 10482000 8613800 16723000 31819 540 29044 267478;267479;267480;267481;267482;267483;267484;267485;267486;267487 212359;212360;212361;212362;212363;212364;212365;212366;212367;212368;212369 212369 11 LQDLEEALQQSK Unmodified 1400.7147 0.7147236 103 CON__Q7Z794;Q7Z794 KRT77 Keratin, type II cytoskeletal 1b yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.202 65.29 2 7.4913E-67 74582 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 195.27 167.06 + 359350000 0 0 0 75953000 14824000 23617000 21758000 24378000 12982000 49767000 16855000 60027000 23600000 19200000 16392000 31820 103 29045 267488;267489;267490;267491;267492;267493;267494;267495;267496;267497;267498;267499 212370;212371;212372;212373;212374;212375;212376;212377;212378;212379;212380;212381 212372 11 LQDLEERDAFAER Unmodified 1590.7638 0.76379906 384 O60231 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 49.145 49.056 3 3.4878E-13 55462 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 113.76 92.207 163420000 0 0 0 9096200 30855000 0 58896000 0 0 0 0 64573000 0 0 0 31821 384 29046 267500;267501;267502;267503;267504 212382;212383;212384;212385 212383 3 LQDLELK Unmodified 857.48583 0.48583328 2033 Q00341 HDLBP Vigilin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 44.513 44.748 2 0.023964 49181 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 100.39 0 637740000 0 0 0 31953000 0 53069000 46978000 46114000 37369000 76121000 79159000 62401000 55208000 65969000 83394000 31822 2033 29047 267505;267506;267507;267508;267509;267510;267511;267512;267513;267514;267515 212386 212386 1 LQDLLETK Unmodified 958.53351 0.53351176 3489 Q8TCG1 KIAA1524 Protein CIP2A yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 50.082 49.966 2 0.0067993 56532 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 96.367 35.658 21412000 0 0 0 4865900 0 0 6694500 0 0 0 0 0 0 9851600 0 31823 3489 29048 267516;267517;267518 212387;212388 212387 2 LQDLLLGPK Unmodified 995.60153 0.60153174 3315 Q8N201 INTS1 Integrator complex subunit 1 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 69.158 69.424 2 0.0067484 78910 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.255 33.028 20927000 0 0 0 0 0 3176700 0 0 0 0 3689500 4365500 0 3555500 6139500 31824 3315 29049 267519;267520;267521;267522;267523 212389;212390;212391 212389 3 LQDLQGEK Unmodified 929.48181 0.48181054 417 O60610 DIAPH1 Protein diaphanous homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 17.484 16.992 2 3.1937E-07 15969 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 159.2 92.397 723120000 0 609390000 0 0 0 0 0 21841000 23174000 0 37360000 0 0 31358000 0 31825 417 29050 267524;267525;267526;267527;267528 212392;212393;212394 212394 2 LQDLQTALQK Unmodified 1156.6452 0.64518747 2056;83 CON__Q01546;Q01546 KRT76 Keratin, type II cytoskeletal 2 oral no no 0 0 0 By MS/MS 10 0 1 1 52.301 51.66 2 0.011712 59046 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 53.756 7.2944 + 13449000 0 0 0 13449000 0 0 0 0 0 0 0 0 0 0 0 31826 83;2056 29051 267529 212395 212395 1 LQDLSSCITQGK Unmodified 1348.6657 0.66566492 1253 P29590 PML Protein PML yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 2 1 1 1 1 49.404 49.722 2 3.2112E-08 55707 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 128.03 75.319 65124000 0 0 0 0 0 0 0 0 12451000 8995000 0 20103000 12050000 11526000 0 31827 1253 29052 267530;267531;267532;267533;267534;267535;267536;267537 212396;212397;212398;212399;212400;212401;212402;212403 212403 8 LQDLTLRDLEK Unmodified 1342.7456 0.7456298 5206 Q9Y4L1 HYOU1 Hypoxia up-regulated protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6 4 5 5 2 1 2 1 1 1 1 1 69.759 66.935 2;3 2.5387E-08 83463 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 131.82 71.382 472030000 70164000 216360000 117730000 6150100 0 16929000 0 0 0 15077000 0 0 12031000 17593000 0 31828 5206 29053 267538;267539;267540;267541;267542;267543;267544;267545;267546;267547 212404;212405;212406;212407;212408;212409;212410;212411;212412 212412 8 LQDLVNR Unmodified 856.47667 0.47666558 2514 Q15291 RBBP5 Retinoblastoma-binding protein 5 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 30.193 30.398 2 0.023527 33037 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 92.467 41.928 199630000 0 0 0 12358000 13654000 14901000 0 15263000 12315000 14585000 16607000 23865000 23485000 23125000 29475000 31829 2514 29054 267548;267549;267550;267551;267552;267553;267554;267555;267556;267557;267558 212413;212414;212415;212416;212417;212418 212413 5 LQDMLANLR Unmodified 1072.5699 0.56991404 371 O43815 STRN Striatin yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 70.292 70.534 2 0.040497 80694 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.377 13.304 8999600 0 0 0 0 0 0 0 0 0 0 0 0 1258800 1629300 6111500 31830 371 29055 267559;267560;267561 212419 212419 1 LQDMLDGFIK Oxidation (M) 1194.5955 0.59546009 1751 P55010 EIF5 Eukaryotic translation initiation factor 5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 74.117 72.703 2 0.0040209 83285 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.27 43.199 118610000 11552000 63464000 6129600 3427300 3080600 3392100 3756800 5275700 3233700 0 7194100 0 0 0 8101100 31831 1751 29056 267562;267563;267564;267565;267566;267567;267568;267569;267570;267571;267572 212420;212421;212422;212423 212421 2850 4 LQDMLDGFIK Unmodified 1178.6005 0.60054547 1751 P55010 EIF5 Eukaryotic translation initiation factor 5 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 5.57 3.85 3 1 3 1 2 1 1 1 1 86.097 83.503 2 3.2721E-11 104459 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 161.79 72.24 379660000 8325900 335340000 3812900 0 0 0 0 0 0 0 8564300 0 0 6022500 17594000 31832 1751 29056 267573;267574;267575;267576;267577;267578;267579 212424;212425;212426;212427;212428;212429 212424 5 LQDNIMK Oxidation (M) 876.4375 0.43750288 2818 Q5VUA4 ZNF318 Zinc finger protein 318 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 15.536 15.672 2 0.020282 15261 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 74.415 26.242 27049000 0 0 0 2390700 0 1964700 2775800 0 2368200 3119600 0 0 4404000 3165700 6859900 31833 2818 29057 267580;267581;267582;267583;267584;267585;267586;267587 212430;212431 212430 4457 2 LQDNVREDLYEAADK Unmodified 1777.8483 0.84825697 4441 Q9H7Z7 PTGES2 Prostaglandin E synthase 2;Prostaglandin E synthase 2 truncated form yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 56.281 56.479 3 2.6164E-07 64027 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 88.507 76.222 157800000 0 0 0 0 8071300 15728000 8937500 0 16353000 17719000 18736000 16747000 17480000 12548000 25482000 31834 4441 29058 267588;267589;267590;267591;267592;267593;267594;267595;267596;267597 212432;212433;212434;212435;212436;212437;212438;212439;212440;212441;212442;212443;212444 212433 12 LQDQIFNLMK Oxidation (M) 1264.6486 0.64855829 351 O43665 RGS10 Regulator of G-protein signaling 10 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 71.014 71.072 2 0.0040077 81811 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 66.351 48.442 31908000 0 0 0 2937500 2308600 3153500 3145700 0 1926800 4794600 2738600 3962100 0 2061200 4879500 31835 351 29059 267598;267599;267600;267601;267602;267603;267604;267605;267606;267607 212445;212446;212447;212448;212449 212445 437 4 LQDQIFNLMK Unmodified 1248.6536 0.65364367 351 O43665 RGS10 Regulator of G-protein signaling 10 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 87.019 83.382 2 0.0055591 103831 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.442 67.912 39768000 0 37913000 1855200 0 0 0 0 0 0 0 0 0 0 0 0 31836 351 29059 267608;267609 212450 212450 1 LQDSSDPDTGSEEEGSSR Unmodified 1894.7664 0.76643741 3693 Q92974 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 16.479 16.776 2 5.2406E-39 15603 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 137.68 135.62 46574000 0 0 0 0 0 0 7130800 4147000 0 5171600 6038100 7183900 6196200 4788100 5918600 31837 3693 29060 267610;267611;267612;267613;267614;267615;267616;267617 212451;212452;212453;212454;212455;212456;212457;212458 212453 8 LQDTLEQIEEQLDVALSK Unmodified 2071.0685 0.068480081 3892 Q96JG6 CCDC132 Coiled-coil domain-containing protein 132 yes yes 0 0 0 By MS/MS 2 0 1 1 100.97 96.261 3 9.5742E-05 118988 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 50.957 42.487 12137000 0 12137000 0 0 0 0 0 0 0 0 0 0 0 0 0 31838 3892 29061 267618 212459 212459 0 LQDTSSYAK Unmodified 1011.4873 0.48728985 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 15.085 15.235 2 0.003237 14736 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 90.709 62.602 236450000 0 0 0 27628000 13032000 18243000 0 28412000 16908000 22370000 39821000 0 37998000 0 32032000 31839 1029 29062 267619;267620;267621;267622;267623;267624;267625;267626;267627;267628;267629 212460;212461;212462;212463;212464;212465;212466;212467;212468;212469;212470;212471 212471 12 LQDTYNLDTDTISK Unmodified 1625.7784 0.77844607 983 P13674 P4HA1 Prolyl 4-hydroxylase subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 59.376 59.566 2 9.6072E-20 67170 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 138.75 119.51 80565000 0 0 0 0 4161100 4786100 0 4975300 0 8538200 10335000 13424000 0 8990300 25355000 31840 983 29063 267630;267631;267632;267633;267634;267635;267636;267637;267638;267639;267640 212472;212473;212474;212475;212476;212477;212478;212479;212480;212481;212482;212483 212476 12 LQDVADSFK Unmodified 1021.508 0.50802529 1601;32 P49792;P0DJD0;P0DJD1;A6NKT7;Q7Z3J3 RANBP2;RGPD1;RGPD2;RGPD3;RGPD4 E3 SUMO-protein ligase RanBP2;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RanBP2-like and GRIP domain-containing protein 3;RanBP2-like and GRIP domain-containing protein 4 no no 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 46.125 46.311 2 0.0039527 50990 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 97.431 46.465 47273000 0 0 0 0 0 12908000 4464400 0 6656300 8069700 5667800 0 0 9507100 0 31841 1601;32 29064 267641;267642;267643;267644;267645;267646 212484;212485;212486;212487 212487 4 LQDVADSFKK Unmodified 1149.603 0.60298831 1601;32 P49792;P0DJD0;P0DJD1;A6NKT7;Q7Z3J3 RANBP2;RGPD1;RGPD2;RGPD3;RGPD4 E3 SUMO-protein ligase RanBP2;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RanBP2-like and GRIP domain-containing protein 3;RanBP2-like and GRIP domain-containing protein 4 no no 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.18 3.74 3 1 7 1 2 1 1 1 1 1 1 1 1 38.318 36.629 3 0.027549 45913 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 43.544 30.928 198760000 7373600 94926000 8014800 10578000 0 0 11195000 12397000 0 0 9952100 0 11779000 13759000 18784000 31842 1601;32 29065 267647;267648;267649;267650;267651;267652;267653;267654;267655;267656;267657 212488;212489;212490 212489 1 LQDVFEFR Unmodified 1052.5291 0.52909508 1189 P25440 BRD2 Bromodomain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 76.228 75.811 2 0.013883 87910 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 71.379 34.359 10182000 0 0 0 5310500 4871400 0 0 0 0 0 0 0 0 0 0 31843 1189 29066 267658;267659 212491 212491 1 LQDYEEK Unmodified 923.42363 0.42362696 1017 P15311 EZR Ezrin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 13.303 13.564 2 0.023409 12064 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.9 58.542 59942000 0 0 0 0 0 0 4005000 0 0 0 0 12511000 0 0 43427000 31844 1017 29067 267660;267661;267662 212492 212492 1 LQEAFSK Unmodified 821.42832 0.42831841 3933 Q96N67 DOCK7 Dedicator of cytokinesis protein 7 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 23.624 23.817 2 0.023967 24749 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 83.753 9.0354 99948000 0 0 0 6362900 7889400 8065200 7276000 7052200 6447000 9203400 10136000 12665000 11597000 0 13254000 31845 3933 29068 267663;267664;267665;267666;267667;267668;267669;267670;267671;267672;267673 212493;212494;212495;212496 212495 4 LQEAGILSAEELQR Unmodified 1555.8206 0.82058566 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.988 73.051 2 4.4159E-19 84151 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 162.68 127.34 147880000 0 0 0 8061600 9488900 13520000 12738000 8637900 10772000 11775000 16575000 20900000 11155000 11125000 13127000 31846 2501 29069 267674;267675;267676;267677;267678;267679;267680;267681;267682;267683;267684;267685 212497;212498;212499;212500;212501;212502;212503;212504;212505;212506;212507;212508;212509 212507 13 LQEALDAEMLEDEAGGGGAGPGGACK Oxidation (M) 2518.0952 0.095181891 2645 Q1KMD3 HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes yes 0 1 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 20 1 3 3 2 1 1 2 3 2 1 1 71.264 71.301 2;3 1.1605E-75 81793 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 120.3 115.74 181490000 0 0 0 6566400 25696000 21823000 9874700 9882600 9175000 16667000 0 44936000 13582000 10574000 12712000 31847 2645 29070 267686;267687;267688;267689;267690;267691;267692;267693;267694;267695;267696;267697;267698;267699;267700;267701;267702;267703;267704;267705 212510;212511;212512;212513;212514;212515;212516;212517 212516 4304 7 LQEALDAEMLEDEAGGGGAGPGGACK Unmodified 2502.1003 0.10026727 2645 Q1KMD3 HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 2 1 1 1 2 1 2 1 2 2 77.706 77.802 2;3 6.5258E-87 89880 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 169.61 162.92 165230000 0 0 0 0 18603000 0 7084800 0 8077800 25996000 11997000 21404000 10376000 23661000 38030000 31848 2645 29070 267706;267707;267708;267709;267710;267711;267712;267713;267714;267715;267716;267717;267718;267719;267720 212518;212519;212520;212521;212522;212523;212524;212525;212526;212527;212528;212529;212530;212531;212532 212519 13 LQEALEDER Unmodified 1101.5302 0.53021729 4890 Q9UH65 SWAP70 Switch-associated protein 70 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS 10 0 4 1 1 1 1 28.991 29.284 2 0.01832 30674 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.502 66.353 37862000 0 0 0 0 0 6218300 0 0 0 6351100 0 0 0 10305000 14988000 31849 4890 29071 267721;267722;267723;267724 212533;212534 212534 1 LQEALEDERQAR Unmodified 1456.727 0.72701962 4890 Q9UH65 SWAP70 Switch-associated protein 70 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 25.94 26.14 3 1.6092E-05 27887 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 91.937 48.555 116100000 0 0 0 5025100 6654800 10028000 10169000 6047900 5601400 9921300 12571000 13256000 8790100 9149500 18888000 31850 4890 29072 267725;267726;267727;267728;267729;267730;267731;267732;267733;267734;267735;267736 212535;212536;212537;212538;212539;212540;212541;212542;212543;212544;212545;212546;212547 212538 13 LQEALMHYK Oxidation (M) 1147.5696 0.56957969 271 O15294 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 32.881 28.178 2 0.030904 39348 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.419 35.201 54967000 31257000 11480000 12230000 0 0 0 0 0 0 0 0 0 0 0 0 31851 271 29073 267737;267738;267739 212548;212549 212549 2 LQEALMHYK Unmodified 1131.5747 0.57466507 271 O15294 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 47.951 42.093 2 0.00061025 58413 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 122.52 51.015 46521000 38257000 0 8263800 0 0 0 0 0 0 0 0 0 0 0 0 31852 271 29073 267740;267741 212550;212551 212550 2 LQEALNLFK Unmodified 1074.6073 0.6073454 1938 P63092;Q5JWF2 GNAS Guanine nucleotide-binding protein G(s) subunit alpha isoforms short;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas yes no 0 0 0 By MS/MS 10 0 1 1 76.502 76.63 2 0.027076 87596 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 72.492 13.888 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31853 1938 29074 267742 212552 212552 1 LQEANAQLAEQACPHDVEMTPVQR Oxidation (M) 2750.2752 0.27521194 2517 Q15334 LLGL1 Lethal(2) giant larvae protein homolog 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 56.377 56.439 3 1.077E-09 64301 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 58.457 48.87 21599000 0 0 0 0 5455500 7671100 3222500 0 0 0 0 0 0 0 5249700 31854 2517 29075 267743;267744;267745;267746 212553;212554;212555 212553 4138 3 LQEANAQLAEQACPHDVEMTPVQR Unmodified 2734.2803 0.28029732 2517 Q15334 LLGL1 Lethal(2) giant larvae protein homolog 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 64.322 64.68 3 1.9209E-27 73382 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.463 79.88 9309100 0 0 0 0 0 0 0 0 0 0 0 0 3054900 0 6254200 31855 2517 29075 267747;267748 212556;212557 212556 2 LQEAPSAASQMK Unmodified 1259.618 0.61798644 2736 Q5JSZ5 PRRC2B Protein PRRC2B yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 29.618 29.948 2 0.0023783 32054 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 63.283 32.713 16154000 0 0 0 0 0 0 1949400 0 2243300 0 4207600 0 0 2948000 4805800 31856 2736 29076 267749;267750;267751;267752;267753;267754 212558;212559;212560;212561 212559 4 LQEAPSSSPDSWNNPVMMTLTK Unmodified 2432.1352 0.13519621 2406 Q14432 PDE3A cGMP-inhibited 3',5'-cyclic phosphodiesterase A yes yes 0 0 0 By MS/MS By MS/MS 10 0 3 1 2 86.341 86.482 2;3 1.0193E-06 100014 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.156 68.688 13403000 0 0 0 0 0 0 0 0 0 3583800 0 0 0 0 9819500 31857 2406 29077 267755;267756;267757 212562;212563 212563 2 LQEDPNYSPQRFPNAQR Unmodified 2058.9872 0.98715049 1502 P46379 BAG6 Large proline-rich protein BAG6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 47.644 47.83 3 0.0025376 53384 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 42.913 34.419 35847000 0 0 0 0 2249500 0 3861000 0 0 6875500 6239700 10071000 0 6550700 0 31858 1502 29078 267758;267759;267760;267761;267762;267763 212564 212564 1 LQEEDQQFR Unmodified 1191.552 0.55201537 2270 Q13322 GRB10 Growth factor receptor-bound protein 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 26.595 26.987 2 0.0034522 27864 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.302 56.575 51432000 0 0 0 0 0 6732800 0 0 0 8624700 8628800 10437000 7887200 0 9122100 31859 2270 29079 267764;267765;267766;267767;267768;267769;267770 212565;212566;212567;212568;212569;212570;212571 212567 7 LQEEERERR Unmodified 1243.6269 0.62691165 871 P08708 RPS17 40S ribosomal protein S17 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 2 2 5.691 5.8075 3 0.026065 3404 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 116.52 74.798 1227200000 0 0 0 145460000 98683000 94019000 118010000 93829000 125260000 106220000 88169000 122520000 141020000 93961000 0 31860 871 29080 267771;267772;267773;267774;267775;267776;267777;267778;267779;267780;267781;267782;267783 212572;212573;212574;212575;212576;212577;212578 212574 7 LQEEIIK Unmodified 871.50148 0.50148335 4254 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 yes yes 0 0 0 By MS/MS 2 0 1 1 43.19 38.042 2 0.01229 49527 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.59 42.332 31060000 0 31060000 0 0 0 0 0 0 0 0 0 0 0 0 0 31861 4254 29081 267784 212579 212579 1 LQEEITK Unmodified 859.4651 0.46509784 1741 P54578 USP14 Ubiquitin carboxyl-terminal hydrolase 14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 20.257 20.538 2 0.023409 21450 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 91.9 13.285 133330000 0 0 0 0 0 19565000 14971000 0 0 18410000 0 29996000 0 15239000 35148000 31862 1741 29082 267785;267786;267787;267788;267789;267790 212580;212581;212582 212580 3 LQEELAASDR Unmodified 1130.5568 0.5567664 3090 Q7Z406 MYH14 Myosin-14 yes yes 0 0 0 By MS/MS 10 0 1 1 29.951 29.638 2 0.031631 32435 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 57.59 15.481 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31863 3090 29083 267791 212583 212583 1 LQEELASGK Unmodified 973.50803 0.50802529 652 O95391 SLU7 Pre-mRNA-splicing factor SLU7 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 2 21.626 21.793 2 0.0031256 23096 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 91.069 10.839 79063000 0 0 0 3760300 3367300 5529900 4961900 3862400 5075500 9853100 0 0 9078300 8460800 25114000 31864 652 29084 267792;267793;267794;267795;267796;267797;267798;267799;267800;267801;267802 212584;212585;212586;212587;212588 212584 5 LQEELDK Unmodified 873.44436 0.4443624 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS 10 0 1 1 19.326 19.945 2 0.035762 19335 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.69 17.527 35212000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35212000 31865 2556 29085 267803 212589 212589 1 LQEELNK Unmodified 872.46035 0.46034682 478;4837 Q9UBD5;O75330 ORC3;HMMR Origin recognition complex subunit 3;Hyaluronan mediated motility receptor no no 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 17.59 17.737 2 0.02333 17691 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 90.986 19.036 132790000 0 0 0 0 12866000 13282000 11661000 9988100 9984200 16128000 0 0 19831000 18226000 20822000 31866 4837;478 29086 267804;267805;267806;267807;267808;267809;267810;267811;267812 212590;212591 212590 2 LQEELSENDK Unmodified 1203.5619 0.56191135 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.53 2.94 1 2 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 25.239 24.314 2 6.4403E-31 25702 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 214.96 179.67 312760000 193870 61066000 0 18418000 15565000 36217000 20858000 12347000 18768000 24221000 0 39230000 36760000 29116000 0 31867 643 29087 267813;267814;267815;267816;267817;267818;267819;267820;267821;267822;267823;267824;267825;267826;267827 212592;212593;212594;212595;212596;212597;212598;212599;212600;212601;212602;212603;212604 212598 13 LQEELSENDKK Unmodified 1331.6569 0.65687437 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 18.263 17.161 2;3 3.7975E-08 22516 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 156.83 75.232 440820000 27823000 236180000 0 11595000 11073000 12392000 11940000 12854000 7506700 14372000 18052000 20344000 15122000 17370000 24194000 31868 643 29088 267828;267829;267830;267831;267832;267833;267834;267835;267836;267837;267838;267839;267840;267841;267842;267843;267844 212605;212606;212607;212608;212609;212610;212611;212612;212613 212607 5 LQEELSQAESTIDELK Unmodified 1831.9051 0.90510315 2391 Q14203 DCTN1 Dynactin subunit 1 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 81.899 79.654 2 3.9929E-07 98228 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.03 111.37 26090000 0 18881000 0 0 0 0 0 0 0 0 0 0 0 0 7208500 31869 2391 29089 267845;267846 212614;212615 212614 1 LQEEMLQR Oxidation (M) 1061.5175 0.51754412 870 P08670 VIM Vimentin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 2 2 1 1 2 2 2 23.503 23.674 2 0.0035015 25659 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 107.32 50.27 480480000 0 0 0 37956000 33463000 45142000 43901000 28736000 25696000 42541000 15817000 42069000 58252000 47551000 59360000 31870 870 29090 267847;267848;267849;267850;267851;267852;267853;267854;267855;267856;267857;267858;267859;267860;267861;267862;267863;267864;267865;267866;267867;267868 212616;212617;212618;212619;212620;212621;212622;212623;212624;212625;212626;212627;212628 212626 1120 11 LQEEMLQR Unmodified 1045.5226 0.5226295 870 P08670 VIM Vimentin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.886 37.067 2 0.00074726 41295 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 173.88 105.45 842310000 0 0 0 53781000 53957000 69959000 57064000 54604000 34635000 75191000 88751000 89421000 87097000 66754000 111090000 31871 870 29090 267869;267870;267871;267872;267873;267874;267875;267876;267877;267878;267879;267880 212629;212630;212631;212632;212633;212634;212635;212636;212637;212638;212639;212640 212629 3 LQEEMLQREEAENTLQSFR Oxidation (M) 2366.1172 0.11723796 870 P08670 VIM Vimentin yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 3 2 2 2 2 2 1 68.915 68.98 3 1.1393E-95 78327 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 178.06 158.24 1429600000 0 0 0 29531000 42136000 201330000 71764000 102630000 116180000 190570000 141550000 201280000 86648000 111220000 134770000 31872 870 29091 267881;267882;267883;267884;267885;267886;267887;267888;267889;267890;267891;267892;267893;267894;267895;267896;267897;267898;267899;267900;267901;267902;267903;267904 212641;212642;212643;212644;212645;212646;212647;212648;212649;212650;212651;212652;212653;212654;212655;212656;212657;212658;212659;212660;212661;212662;212663;212664;212665;212666;212667 212650 1120 27 LQEEMLQREEAENTLQSFR Unmodified 2350.1223 0.12232334 870 P08670 VIM Vimentin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 74.384 74.56 3 8.3189E-24 86062 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 98.175 89.575 270490000 0 0 0 0 0 17795000 0 18163000 15911000 29131000 17707000 26837000 0 22817000 122130000 31873 870 29091 267905;267906;267907;267908;267909;267910;267911;267912 212668;212669;212670;212671;212672;212673;212674;212675;212676 212676 9 LQEEQENAPEFVK Unmodified 1559.7468 0.74675201 4318 Q9H098 FAM107B Protein FAM107B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 5.4 3.77 2 1 2 1 2 1 1 51.912 48.385 2 1.2884E-18 61871 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 162.36 139.72 280460000 9324800 228140000 0 0 0 0 0 0 0 0 13430000 0 0 0 29570000 31874 4318 29092 267913;267914;267915;267916;267917 212677;212678;212679;212680;212681;212682 212678 6 LQEESDLELAK Unmodified 1273.6402 0.64016167 547 O75822 EIF3J Eukaryotic translation initiation factor 3 subunit J yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.9 3.81 3 1 6 1 2 1 1 1 1 1 1 1 50.659 47.993 2 3.6737E-09 61555 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 157.96 85.471 893410000 26538000 807100000 1547000 0 0 11325000 0 0 0 16468000 19285000 0 0 0 11143000 31875 547 29093 267918;267919;267920;267921;267922;267923;267924;267925;267926;267927 212683;212684;212685;212686;212687;212688;212689;212690;212691;212692;212693 212685 11 LQEESEVLQK Unmodified 1201.619 0.6190323 4463 Q9H974 QTRTD1 Queuine tRNA-ribosyltransferase subunit QTRTD1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 34.323 34.456 2 0.0014624 36702 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 112.41 78.614 57733000 0 0 0 3328900 2611400 3692800 4662000 4300200 3353700 3693300 8380500 0 4708500 7048800 11952000 31876 4463 29094 267928;267929;267930;267931;267932;267933;267934;267935;267936;267937;267938 212694;212695;212696;212697;212698;212699;212700 212695 7 LQEEVVRK Unmodified 999.57129 0.57129425 3166 Q86VI3 IQGAP3 Ras GTPase-activating-like protein IQGAP3 yes yes 0 0 1 By MS/MS 2 0 1 1 36.663 33.279 2 0.016377 42197 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 108.24 19.504 4092800 0 0 4092800 0 0 0 0 0 0 0 0 0 0 0 0 31877 3166 29095 267939 212701 212701 0 LQEEYYEEK Unmodified 1229.5452 0.54519866 3155 Q86UU0 BCL9L B-cell CLL/lymphoma 9-like protein yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 31.423 31.232 2 0.0024905 34094 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 152.47 129.73 211460000 0 40046000 0 9566700 8252900 9444900 12742000 10267000 11749000 13022000 21067000 20535000 14184000 15403000 25183000 31878 3155 29096 267940;267941;267942;267943;267944;267945;267946;267947;267948;267949;267950;267951;267952 212702;212703;212704;212705;212706;212707;212708;212709;212710;212711;212712;212713;212714;212715;212716 212703 15 LQEFLQTLR Unmodified 1146.6397 0.63970816 4669 Q9NVI1 FANCI Fanconi anemia group I protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.135 74.196 2 0.0037017 85750 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 101.64 18.379 134680000 0 0 0 7475100 8392000 12407000 7154000 13464000 10416000 13106000 9027900 14534000 11286000 11959000 15462000 31879 4669 29097 267953;267954;267955;267956;267957;267958;267959;267960;267961;267962;267963;267964 212717;212718;212719;212720;212721;212722;212723;212724;212725;212726;212727 212727 9 LQEFVLNK Unmodified 989.55458 0.55458155 1784 P56524 HDAC4 Histone deacetylase 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.715 55.845 2 0.006821 63444 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 95.352 55.81 104400000 0 0 0 6662700 6034000 8324100 7811400 8967400 5376600 10550000 11069000 11491000 7672500 8055500 12383000 31880 1784 29098 267965;267966;267967;267968;267969;267970;267971;267972;267973;267974;267975;267976 212728;212729;212730;212731;212732;212733;212734;212735;212736;212737;212738;212739 212728 12 LQEGSLSSSK Unmodified 1034.5244 0.52440364 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 16.792 16.964 2 0.0014693 15300 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 90.906 35.465 144610000 0 0 0 7858600 10936000 10322000 14747000 9714600 8407100 11090000 16797000 20406000 0 16073000 18259000 31881 5262 29099 267977;267978;267979;267980;267981;267982;267983;267984;267985;267986;267987 212740;212741;212742;212743;212744;212745;212746;212747;212748;212749 212746 10 LQEIDIFNNQLK Unmodified 1473.7827 0.78274359 2581 Q15811;CON__ENSEMBL:ENSBTAP00000001528 ITSN1 Intersectin-1 yes no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.45 3.29 1 1 9 1 1 1 1 1 1 1 1 1 1 1 81.471 81.941 2 0.0027969 95136 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 76.943 41.529 + 16865000 198120 0 1140600 0 0 0 2162900 1745800 0 0 1930600 0 3117200 2885800 3683700 31882 2581 29100 267988;267989;267990;267991;267992;267993;267994;267995;267996;267997;267998 212750;212751;212752;212753;212754;212755;212756;212757 212756 7 LQEIFSR Unmodified 891.48142 0.48141661 3061 Q7LBC6 KDM3B Lysine-specific demethylase 3B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.272 47.436 2 0.034771 53303 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 71.134 28.133 358790000 0 0 0 16323000 18709000 31922000 26577000 26607000 17200000 31428000 36287000 31108000 39408000 32740000 50483000 31883 3061 29101 267999;268000;268001;268002;268003;268004;268005;268006;268007;268008;268009;268010 212758 212758 1 LQEIGLGAFER Unmodified 1231.6561 0.65608651 2665 Q32P44 EML3 Echinoderm microtubule-associated protein-like 3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 2 1 1 77.135 77.182 2 0.00057718 89235 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 80.688 21.339 66168000 0 0 0 4611000 3678100 5232600 5274500 3816000 0 6797400 7694600 9336000 7993200 0 11734000 31884 2665 29102 268011;268012;268013;268014;268015;268016;268017;268018;268019;268020;268021;268022 212759;212760;212761;212762;212763;212764;212765;212766;212767 212766 9 LQEIPTFQPLLK Unmodified 1425.8232 0.82315184 3719 Q969J3 LOH12CR1 Loss of heterozygosity 12 chromosomal region 1 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 87.217 86.627 2 0.002929 100030 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.78 25.446 51850000 0 26861000 0 0 0 3689300 0 2585400 3008300 5524800 0 0 3917700 0 6264000 31885 3719 29103 268023;268024;268025;268026;268027;268028;268029;268030 212768;212769;212770;212771;212772;212773 212771 6 LQEIYLQAEEQEVLPEELSNRLEVVK Unmodified 3097.6183 0.61831061 3477 Q8TB03 CXorf38 Uncharacterized protein CXorf38 yes yes 0 0 1 By MS/MS 2 0 1 1 96.01 87.879 3 4.8247E-05 113602 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.707 42.096 9660200 9660200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31886 3477 29104 268031 212774 212774 1 LQEIYNR Unmodified 934.48723 0.48723027 3693 Q92974 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.051 29.246 2 8.9592E-06 31984 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 159.19 52.432 764620000 0 0 0 31576000 38144000 34193000 75240000 65485000 53074000 71519000 98489000 74375000 79595000 64449000 78478000 31887 3693 29105 268032;268033;268034;268035;268036;268037;268038;268039;268040;268041;268042;268043 212775;212776;212777;212778;212779;212780;212781;212782;212783 212782 5 LQELAELEAK Unmodified 1142.6183 0.61830402 4409 Q9H5V9 CXorf56 UPF0428 protein CXorf56 yes yes 0 0 0 By MS/MS 10 0 1 1 60.199 59.682 2 0.033422 68509 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 57.047 0.92559 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31888 4409 29106 268044 212784 212784 1 LQELASPPAGR Unmodified 1137.6142 0.6142217 3322 Q8N3F8 MICALL1 MICAL-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 88.355 84.701 2 0.040378 102435 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 49.418 38.784 57073000 0 42244000 14828000 0 0 0 0 0 0 0 0 0 0 0 0 31889 3322 29107 268045;268046 212785 212785 1 LQELEANPPSDVYLSSR Unmodified 1916.948 0.94797101 397 O60341 KDM1A Lysine-specific histone demethylase 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 72.513 72.581 2;3 1.9167E-70 83459 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 207.39 162.97 540890000 0 0 0 25808000 42706000 44286000 39834000 36267000 25412000 58254000 47754000 60244000 45396000 57022000 57904000 31890 397 29108 268047;268048;268049;268050;268051;268052;268053;268054;268055;268056;268057;268058;268059;268060;268061;268062;268063;268064;268065;268066;268067;268068;268069;268070 212786;212787;212788;212789;212790;212791;212792;212793;212794;212795;212796;212797;212798;212799;212800;212801;212802;212803;212804;212805;212806;212807;212808;212809;212810;212811;212812 212806 21 LQELEGQIADLK Unmodified 1355.7296 0.72964538 632 O95239 KIF4A Chromosome-associated kinesin KIF4A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 3 1 1 1 3 1 1 1 2 47.398 47.742 2 0.0047827 55622 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.432 3.7062 473440000 0 0 0 0 0 69668000 49171000 0 62406000 29682000 75433000 48131000 0 42732000 96219000 31891 632 29109 268071;268072;268073;268074;268075;268076;268077;268078;268079;268080;268081;268082;268083;268084 212813;212814;212815;212816;212817;212818;212819;212820;212821;212822;212823;212824;212825 212818 13 LQELEKIKDLHMAEK Oxidation (M) 1839.9764 0.97643437 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 1 2 By MS/MS 10 0 1 1 49.949 50.014 3 0.03027 56636 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 42.568 24.204 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31892 2291 29110 268085 212826 212826 1 LQELEQENK Unmodified 1129.5615 0.56151742 4077 Q99996 AKAP9 A-kinase anchor protein 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 20.788 21.098 2 0.00037755 20699 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 147.19 84.468 31686000 0 0 0 0 2180500 0 2591200 0 0 0 3755000 7325300 6257600 4077300 5498900 31893 4077 29111 268086;268087;268088;268089;268090;268091;268092;268093;268094 212827;212828;212829;212830;212831;212832;212833;212834;212835;212836 212832 10 LQELESCSGLGSTSDDTDVR Unmodified 2167.9539 0.95392061 2463 Q14C86 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 56.557 56.676 2 3.1479E-109 64333 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 180.78 166.82 57132000 0 0 0 4894800 4437400 5544700 0 3362100 0 0 8236200 10602000 4853600 5395100 9806200 31894 2463 29112 268095;268096;268097;268098;268099;268100;268101;268102;268103;268104;268105 212837;212838;212839;212840;212841;212842;212843;212844;212845;212846 212841 10 LQELIQK Unmodified 870.51747 0.51746776 149 O00410 IPO5 Importin-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 35.707 34.61 2 2.0213E-24 37577 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 181.2 52.815 2927500000 58012000 2211800000 25150000 23473000 20325000 86036000 32912000 26761000 19472000 71807000 57024000 60985000 37459000 53811000 142480000 31895 149 29113 268106;268107;268108;268109;268110;268111;268112;268113;268114;268115;268116;268117;268118;268119;268120;268121 212847;212848;212849;212850;212851;212852;212853;212854;212855;212856;212857;212858;212859;212860;212861;212862;212863 212857 16 LQELNYNLK Unmodified 1133.6081 0.60807369 1448 P42224 STAT1 Signal transducer and activator of transcription 1-alpha/beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.25 3.34 2 1 1 1 2 1 59.848 55.271 2 0.00066779 68101 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 121.62 75.901 490140000 6152700 478720000 0 0 0 0 0 0 0 0 0 0 0 0 5262800 31896 1448 29114 268122;268123;268124;268125 212864;212865;212866;212867;212868 212867 5 LQELPDAVPHGEMPR Unmodified 1687.8352 0.83518986 1333 P33992 MCM5 DNA replication licensing factor MCM5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 2 64.462 64.132 2;3 4.1058E-05 72644 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.655 61.116 290440000 0 40404000 0 10100000 6678400 18975000 0 17553000 11703000 16550000 22960000 34048000 11329000 28469000 71671000 31897 1333 29115 268126;268127;268128;268129;268130;268131;268132;268133;268134;268135;268136;268137;268138 212869;212870;212871;212872;212873;212874;212875;212876;212877;212878;212879;212880;212881;212882;212883 212874 14 LQELQVNLVR Unmodified 1210.7034 0.70337105 1456 P42357 HAL Histidine ammonia-lyase yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 71.583 71.643 2 0.012435 82396 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 52.482 30.632 80641000 0 0 0 46971000 2485100 4032100 1869300 4257800 1839600 5652700 3623400 5021100 2158000 0 2730400 31898 1456 29116 268139;268140;268141;268142;268143;268144;268145;268146;268147;268148;268149 212884 212884 1 LQELSAEER Unmodified 1073.5353 0.53530267 4636 Q9NTK5 OLA1 Obg-like ATPase 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 28.966 29.083 2 2.4812E-05 31466 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 138.1 87.971 268060000 0 0 0 18329000 11006000 37339000 22425000 14586000 13239000 43441000 0 0 23119000 27586000 56986000 31899 4636 29117 268150;268151;268152;268153;268154;268155;268156;268157;268158;268159;268160 212885;212886;212887;212888;212889;212890;212891;212892;212893;212894;212895;212896 212889 8 LQELSAEERQK Unmodified 1329.6888 0.6888432 4636 Q9NTK5 OLA1 Obg-like ATPase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.21 3.75 4 1 9 1 2 2 1 1 1 1 1 1 1 1 1 22.865 21.609 2;3 0.0002631 27334 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 121.73 64.134 1131500000 73543000 657910000 338720000 7235200 0 10462000 5965800 3768300 3633300 5767100 7009000 6403800 0 0 11099000 31900 4636 29118 268161;268162;268163;268164;268165;268166;268167;268168;268169;268170;268171;268172;268173;268174 212897;212898;212899;212900;212901;212902;212903 212903 7 LQELSSK Unmodified 803.43888 0.43888309 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 14.701 14.032 2 0.018831 17243 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.24 60.523 702180000 23094000 335850000 6755500 26884000 9439000 72242000 24844000 8665700 9517500 89848000 0 20517000 0 44158000 30363000 31901 1565 29119 268175;268176;268177;268178;268179;268180;268181;268182;268183;268184;268185;268186;268187 212904;212905;212906 212905 2 LQELSSKADEASELACPTPK Unmodified 2173.0573 0.057263467 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 1 By MS/MS 3 0 1 1 61.193 56.41 3 0.00025216 69391 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 51.819 43.028 2546800 0 2546800 0 0 0 0 0 0 0 0 0 0 0 0 0 31902 1565 29120 268188 212907;212908 212908 2 LQELTDLLQEK Unmodified 1328.7187 0.71874635 2816 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.493 80.554 2 5.1159E-16 93090 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 163.86 114.41 281940000 0 0 0 5002400 11457000 17867000 13857000 20657000 17373000 34471000 27107000 30232000 22988000 23423000 57500000 31903 2816 29121 268189;268190;268191;268192;268193;268194;268195;268196;268197;268198;268199;268200 212909;212910;212911;212912;212913;212914;212915;212916;212917;212918;212919;212920 212915 11 LQEMEGTVK Oxidation (M) 1049.5063 0.50631073 1356 P35579 MYH9 Myosin-9 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.9 2.69 2 1 18 1 2 2 2 2 1 1 1 1 2 1 2 2 1 13.182 12.771 2 0.00054854 14939 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.19 52.189 2276200000 21447000 211980000 0 202530000 133010000 247370000 143260000 91831000 107220000 139250000 227410000 200220000 299540000 162780000 88299000 31904 1356 29122 268201;268202;268203;268204;268205;268206;268207;268208;268209;268210;268211;268212;268213;268214;268215;268216;268217;268218;268219;268220;268221 212921;212922;212923;212924;212925;212926;212927;212928;212929;212930;212931;212932;212933;212934;212935;212936;212937;212938;212939;212940;212941;212942;212943;212944;212945 212927 2082 21 LQEMEGTVK Unmodified 1033.5114 0.51139611 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 26.232 26.082 2 0.0029054 27790 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 135.83 43.924 3768800000 0 789520000 0 170650000 232930000 261780000 213850000 177710000 209190000 233140000 280180000 392400000 271410000 233100000 302970000 31905 1356 29122 268222;268223;268224;268225;268226;268227;268228;268229;268230;268231;268232;268233;268234 212946;212947;212948;212949;212950;212951;212952;212953;212954;212955;212956;212957;212958;212959;212960;212961;212962;212963 212953 18 LQEPIVLTK Unmodified 1039.6277 0.6277465 3248 Q8IWW6 ARHGAP12 Rho GTPase-activating protein 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 60.654 60.75 2 0.040497 69549 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 44.377 22.675 34515000 0 0 0 2541700 1907600 2836400 3227400 2589000 2023800 4448400 3187400 3699700 0 3054100 4999500 31906 3248 29123 268235;268236;268237;268238;268239;268240;268241;268242;268243;268244;268245 212964 212964 1 LQEPPASAVR Unmodified 1066.5771 0.57710791 2179 Q10570 CPSF1 Cleavage and polyadenylation specificity factor subunit 1 yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 31.396 31.548 2 0.01862 34685 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 48.283 25.543 112600000 0 0 0 5447700 7598100 0 8635300 13253000 11185000 9677600 9580200 14846000 18082000 14293000 0 31907 2179 29124 268246;268247;268248;268249;268250;268251;268252;268253;268254;268255 212965 212965 1 LQEPPASAVREAADKEEPPSK Unmodified 2248.1335 0.13353995 2179 Q10570 CPSF1 Cleavage and polyadenylation specificity factor subunit 1 yes yes 0 0 2 By MS/MS 2 0 1 1 51.01 47.089 4 0.011661 59217 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 27.471 23.085 41522000 0 0 41522000 0 0 0 0 0 0 0 0 0 0 0 0 31908 2179 29125 268256 212966 212966 1 LQEQEMIK Oxidation (M) 1033.5114 0.51139611 5332 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 4 3.46 3 1 1 1 1 1 28.626 25.241 2 0.015877 33259 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.942 10.608 + 1054500000 28056000 789520000 4004900 0 232930000 0 0 0 0 0 0 0 0 0 0 31909 5332 29126 268257;268258;268259;268260 212967;212968 212967 6728 2 LQEQEVFFK Unmodified 1166.5972 0.59717465 4365 Q9H2G2 SLK STE20-like serine/threonine-protein kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 65.036 63.699 2 0.00038261 81703 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 141.39 101.73 563840000 18023000 355940000 11091000 11422000 9031800 16267000 11560000 9342100 9800900 16545000 19774000 23912000 14608000 14421000 22108000 31910 4365 29127 268261;268262;268263;268264;268265;268266;268267;268268;268269;268270;268271;268272;268273;268274;268275;268276 212969;212970;212971;212972;212973;212974;212975;212976;212977;212978;212979;212980;212981;212982;212983;212984;212985 212973 16 LQEQILSLTAK Unmodified 1242.7184 0.71835242 1759 P55198 MLLT6 Protein AF-17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.584 71.656 2 0.0085241 82470 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 51.436 35.233 48111000 0 0 0 1947100 2356000 4555200 3238200 2884400 3442300 4558200 5711200 4556600 4569500 2661300 7630500 31911 1759 29128 268277;268278;268279;268280;268281;268282;268283;268284;268285;268286;268287;268288 212986;212987;212988;212989;212990 212986 5 LQEQLTK Unmodified 858.48108 0.48108226 2867 Q6BDS2 UHRF1BP1 UHRF1-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 19.705 19.868 2 0.023733 20095 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 84.227 13.558 194470000 0 0 0 11696000 14497000 12713000 16985000 15762000 13596000 18943000 22619000 0 27248000 16810000 23597000 31912 2867 29129 268289;268290;268291;268292;268293;268294;268295;268296;268297;268298;268299 212991;212992;212993;212994;212995 212993 5 LQEQVTDLR Unmodified 1100.5826 0.58258722 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.385 40.565 2 0.00355 44742 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 89.698 30.781 944400000 0 0 0 44659000 44799000 67314000 65575000 47818000 51321000 79758000 108080000 97597000 99841000 89536000 148110000 31913 965 29130 268300;268301;268302;268303;268304;268305;268306;268307;268308;268309;268310;268311 212996;212997;212998;212999;213000;213001;213002;213003;213004;213005 213001 10 LQEQVTDLRSQNTK Unmodified 1658.8588 0.85876208 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 1 3 2 36.918 32.678 2;3 2.7466E-11 41088 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 110.14 96.741 313000000 0 214580000 98422000 0 0 0 0 0 0 0 0 0 0 0 0 31914 965 29131 268312;268313;268314;268315;268316;268317 213006;213007;213008;213009;213010;213011 213011 4 LQERAEEEEREK Unmodified 1544.7431 0.74306362 4327 Q9H0G5 NSRP1 Nuclear speckle splicing regulatory protein 1 yes yes 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 9.8085 6.7541 3 0.00441 8690 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 80.312 69.366 46446000 27891000 0 18554000 0 0 0 0 0 0 0 0 0 0 0 0 31915 4327 29132 268318;268319 213012;213013 213013 2 LQESIEYEDLGK Unmodified 1422.6878 0.68784015 1324 P32780 GTF2H1 General transcription factor IIH subunit 1 yes yes 0 0 0 By MS/MS 2 0 1 1 64.75 58.833 2 3.0338E-05 74963 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.39 114.1 143640000 0 143640000 0 0 0 0 0 0 0 0 0 0 0 0 0 31916 1324 29133 268320 213014 213014 1 LQESPCIFALTPR Unmodified 1530.7864 0.78644876 3316 Q8N2W9 PIAS4 E3 SUMO-protein ligase PIAS4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 82.263 82.302 2 0.00059107 95622 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 93.345 63.091 75929000 0 0 0 3702600 4816000 7017100 3450200 5336800 5213200 9048000 17212000 0 7934300 12199000 0 31917 3316 29134 268321;268322;268323;268324;268325;268326;268327;268328;268329;268330 213015;213016;213017;213018;213019;213020;213021;213022;213023;213024 213021 10 LQESPEDMPAGQTPHTVILFAHNDLVDK Oxidation (M) 3117.5077 0.5077143 1332 P33991 MCM4 DNA replication licensing factor MCM4 yes yes 0 1 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 78.94 77.731 4 2.3398E-60 89636 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 105.17 100.19 104800000 42261000 0 0 0 0 0 0 3522700 0 9176800 7211000 0 0 6599100 36028000 31918 1332 29135 268331;268332;268333;268334;268335;268336 213025;213026;213027;213028 213026 1996 4 LQESPEDMPAGQTPHTVILFAHNDLVDK Unmodified 3101.5128 0.51279968 1332 P33991 MCM4 DNA replication licensing factor MCM4 yes yes 0 0 0 By MS/MS 2 0 2 2 87.287 79.156 3;4 8.9267E-56 103101 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 115.18 109.28 50569000 50569000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31919 1332 29135 268337;268338 213029;213030;213031 213030 3 LQESQPGNAVIDK Unmodified 1397.7151 0.71505795 2890 Q6IQ49 SDE2 Protein SDE2 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 35.275 34.742 2 7.1916E-25 43461 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 184.24 138.08 232000000 0 47048000 0 12085000 0 14390000 15322000 12967000 11359000 19780000 17603000 19800000 17388000 15100000 29157000 31920 2890 29136 268339;268340;268341;268342;268343;268344;268345;268346;268347;268348;268349;268350;268351 213032;213033;213034;213035;213036;213037;213038;213039;213040;213041;213042;213043 213035 12 LQESTQTVQALQYSTVDGPLTASK Unmodified 2564.297 0.29697647 2809 Q5VT25 CDC42BPA Serine/threonine-protein kinase MRCK alpha yes yes 0 0 0 By MS/MS 2 0 1 1 82.79 78.085 3 0.0018321 97073 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 17.012 9.819 39974000 0 39974000 0 0 0 0 0 0 0 0 0 0 0 0 0 31921 2809 29137 268352 213044 213044 1 LQESTQTVQSLHGSSR Unmodified 1756.8704 0.8703894 5247 Q9Y5S2 CDC42BPB Serine/threonine-protein kinase MRCK beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 31.366 30.32 3 7.4903E-11 32890 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 96.163 78.657 223830000 13067000 10295000 7201800 12254000 11141000 16099000 11502000 12688000 9929400 16822000 24096000 14976000 21716000 20525000 21516000 31922 5247 29138 268353;268354;268355;268356;268357;268358;268359;268360;268361;268362;268363;268364;268365;268366;268367;268368 213045;213046;213047;213048;213049;213050;213051;213052;213053;213054;213055;213056;213057;213058;213059;213060;213061;213062;213063 213047 19 LQESVMEASR Unmodified 1148.5496 0.54957253 382 O60216 RAD21 Double-strand-break repair protein rad21 homolog yes yes 0 0 0 By matching By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 32.553 32.649 2 0.00090024 35192 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 116.3 59.257 34471000 0 0 0 5971700 5475300 0 0 0 0 0 8916400 0 0 0 14108000 31923 382 29139 268369;268370;268371;268372 213064 213064 1 LQESVMEASR Oxidation (M) 1164.5445 0.54448715 382 O60216 RAD21 Double-strand-break repair protein rad21 homolog yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 19.993 20.183 2 0.0067173 20768 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 56.432 34.904 18273000 0 0 0 1536300 1250600 0 2728100 0 0 1828400 2465500 3154900 2722800 2586800 0 31924 382 29139 268373;268374;268375;268376;268377;268378;268379;268380 213065;213066;213067;213068 213066 490 4 LQETGLR Unmodified 815.45012 0.45011648 1784 P56524 HDAC4 Histone deacetylase 4 yes yes 0 0 0 By MS/MS 10 0 1 1 17.03 17.187 2 0.025177 16808 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 81.297 8.2579 32672000 0 0 0 0 0 0 0 0 32672000 0 0 0 0 0 0 31925 1784 29140 268381 213069 213069 1 LQETLSAADR Unmodified 1102.5619 0.56185177 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.254 32.441 2 1.0142E-09 35722 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 149.27 66.005 736950000 0 0 0 32004000 37764000 48107000 38637000 54713000 28047000 62193000 66019000 90805000 69235000 66525000 142900000 31926 1986 29141 268382;268383;268384;268385;268386;268387;268388;268389;268390;268391;268392;268393 213070;213071;213072;213073;213074;213075;213076;213077;213078;213079;213080 213080 8 LQETPQDCSGGPVRR Unmodified 1698.8108 0.81076603 202 O14686 KMT2D Histone-lysine N-methyltransferase 2D yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 24.213 24.267 3 0.00055824 25999 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 57.804 31.263 24005000 0 0 0 0 3333500 3253600 2326000 4903200 0 6773600 0 0 0 3415500 0 31927 202 29142 268394;268395;268396;268397;268398;268399 213081;213082;213083;213084 213084 4 LQETQMSTTSK Oxidation (M) 1268.5918 0.59183127 1406;2357 P39880;Q13948 CUX1 Homeobox protein cut-like 1;Protein CASP no no 0 1 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.2925 7.4217 2 0.00039447 5422 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 79.974 57.333 68619000 0 0 0 3352700 2816900 3644600 4802200 3985600 5556000 6931000 11468000 6129800 7035700 6070200 6826500 31928 1406;2357 29143 268400;268401;268402;268403;268404;268405;268406;268407;268408;268409;268410;268411 213085;213086 213085 2194 2 LQETQMSTTSK Unmodified 1252.5969 0.59691665 1406;2357 P39880;Q13948 CUX1 Homeobox protein cut-like 1;Protein CASP no no 0 0 0 By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.264 18.452 2 4.1804E-13 17429 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 166.19 145.67 119910000 0 0 0 6580700 9501900 10453000 7666800 10508000 6227600 12828000 10413000 11154000 8932900 8946100 16701000 31929 1406;2357 29143 268412;268413;268414;268415;268416;268417;268418;268419;268420;268421;268422;268423 213087;213088;213089;213090;213091;213092 213088 5 LQETSSQSYVEEQK Unmodified 1654.7686 0.76860967 3381 Q8N9T8 KRI1 Protein KRI1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 30.676 30.869 2 1.7292E-18 33271 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 131.43 96.712 37067000 0 0 0 0 2468000 2685300 2959800 0 1712100 4000300 4602300 0 7406000 5116700 6116900 31930 3381 29144 268424;268425;268426;268427;268428;268429;268430;268431;268432;268433;268434 213093;213094;213095;213096;213097;213098;213099;213100 213098 8 LQEVECEEQR Unmodified 1318.5823 0.58232922 2323 Q13596 SNX1 Sorting nexin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.354 21.558 2 3.3432E-11 21888 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 159.37 135.94 184610000 0 0 0 9768600 8006500 22834000 13437000 8084900 10258000 20074000 22784000 22353000 13027000 11774000 22204000 31931 2323 29145 268435;268436;268437;268438;268439;268440;268441;268442;268443;268444;268445;268446 213101;213102;213103;213104;213105;213106;213107;213108;213109;213110;213111;213112 213106 12 LQEVECEEQRLRK Unmodified 1715.8625 0.86246725 2323 Q13596 SNX1 Sorting nexin-1 yes yes 0 0 2 By MS/MS 2 0 1 1 40.536 33.914 3 0.048539 46968 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.44 29.016 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31932 2323 29146 268447 213113 213113 1 LQEVEVPEDFGPVR Unmodified 1612.8097 0.80968662 699 O95834 EML2 Echinoderm microtubule-associated protein-like 2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 78.028 78.157 2 0.007527 89985 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 57.019 32.676 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31933 699 29147 268448;268449 213114;213115 213115 2 LQEVSLR Unmodified 843.48142 0.48141661 3559;2582 Q15813;Q8WVB6 TBCE;CHTF18 Tubulin-specific chaperone E;Chromosome transmission fidelity protein 18 homolog no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 36.835 37.03 2 0.023334 40675 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 90.777 5.4172 295920000 0 0 0 0 28525000 0 30154000 29979000 21674000 59063000 38312000 53952000 0 34258000 0 31934 2582;3559 29148 268450;268451;268452;268453;268454;268455;268456;268457 213116;213117;213118;213119;213120;213121;213122;213123 213119 8 LQEVSLRNCAVSCAGEK Unmodified 1919.9193 0.9193302 2582 Q15813 TBCE Tubulin-specific chaperone E yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 53.277 47.262 3 0.00025776 64459 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.845 24.388 48743000 42783000 0 5960000 0 0 0 0 0 0 0 0 0 0 0 0 31935 2582 29149 268458;268459 213124 213124 1 LQEVTHQGENTK Unmodified 1382.679 0.6790068 3324 Q8N3P4 VPS8 Vacuolar protein sorting-associated protein 8 homolog yes yes 0 0 0 By MS/MS By MS/MS 2.4 0.49 3 2 4 1 12.186 9.0607 2;3 3.987E-11 12284 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.72 75.008 78570000 0 77541000 1029400 0 0 0 0 0 0 0 0 0 0 0 0 31936 3324 29150 268460;268461;268462;268463;268464 213125;213126;213127 213125 2 LQEYFNK Unmodified 940.46543 0.46543219 4530 Q9HD67 MYO10 Unconventional myosin-X yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.64 2.9 1 1 9 2 1 1 1 1 1 1 1 1 1 36.684 35.942 2 0.01947 46209 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.19 48.923 75183000 0 40800000 0 0 2922600 3171200 3515800 3101800 2431800 5540300 4633700 0 0 4264400 4801800 31937 4530 29151 268465;268466;268467;268468;268469;268470;268471;268472;268473;268474;268475 213128;213129;213130 213128 3 LQEYLGK Unmodified 849.45962 0.45961853 2961 Q6PKG0 LARP1 La-related protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 2 1 1 30.648 30.852 2 0.023412 33912 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 86.512 18.114 221520000 0 0 0 13510000 14000000 19120000 16357000 0 14656000 20910000 19873000 23675000 31208000 19898000 28312000 31938 2961 29152 268476;268477;268478;268479;268480;268481;268482;268483;268484;268485;268486;268487 213131;213132;213133;213134;213135;213136;213137;213138;213139 213139 9 LQEYNVGGK Unmodified 1006.5084 0.50835964 1502 P46379 BAG6 Large proline-rich protein BAG6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 25.485 25.688 2 0.00036878 26266 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 147.29 69.615 660790000 0 0 0 24332000 36885000 55004000 47767000 70657000 41016000 57386000 61150000 71082000 60180000 60324000 75010000 31939 1502 29153 268488;268489;268490;268491;268492;268493;268494;268495;268496;268497;268498;268499 213140;213141;213142;213143;213144;213145;213146;213147;213148;213149;213150;213151;213152;213153;213154;213155;213156 213148 17 LQFIADHCPTLR Unmodified 1469.7449 0.74491829 2232 Q13098 GPS1 COP9 signalosome complex subunit 1 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 64.855 64.442 3 0.0030198 73935 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 45.28 31.037 10806000 0 0 0 3006300 2284200 5515400 0 0 0 0 0 0 0 0 0 31940 2232 29154 268500;268501;268502 213157;213158 213158 2 LQFIFTNIDPK Unmodified 1334.7234 0.72343779 4502 Q9HBM1 SPC25 Kinetochore protein Spc25 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 88.125 87.401 2 0.00034474 101280 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.496 78.79 61719000 13087000 0 1080900 0 2208300 4765600 2436900 3148600 4935800 6422700 4432600 4243600 2478800 3311700 9166400 31941 4502 29155 268503;268504;268505;268506;268507;268508;268509;268510;268511;268512;268513;268514;268515 213159;213160;213161;213162;213163;213164;213165;213166;213167;213168;213169;213170;213171;213172 213162 14 LQFNEFVNTVPTK Unmodified 1535.7984 0.79839365 1417 P40617 ARL4A ADP-ribosylation factor-like protein 4A yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 80.081 80.177 2 0.032503 92661 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 42.743 26.49 32966000 0 0 0 0 2134700 1904700 2070500 4915400 0 3826900 4495200 3843000 1910800 2585000 5280100 31942 1417 29156 268516;268517;268518;268519;268520;268521;268522;268523;268524;268525 213173;213174 213174 2 LQFNTTNCRSDTVMEK Oxidation (M) 1958.8826 0.88261034 3842 Q96FZ2 HMCES Embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 42.812 37.546 3 0.00034805 51368 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.485 58.166 31346000 26271000 0 5075000 0 0 0 0 0 0 0 0 0 0 0 0 31943 3842 29157 268526;268527 213175 213175 5362 1 LQFNTTNCRSDTVMEK Unmodified 1942.8877 0.88769572 3842 Q96FZ2 HMCES Embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 53.264 47.249 3 0.0030079 64658 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.097 48.344 33505000 30799000 0 2706000 0 0 0 0 0 0 0 0 0 0 0 0 31944 3842 29157 268528;268529 213176;213177 213177 2 LQFPLPTAQR Unmodified 1169.6557 0.65569258 1658 P51570 GALK1 Galactokinase yes yes 0 0 0 By MS/MS 10 0 1 1 76.347 76.633 2 0.039816 88004 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.112 27.858 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31945 1658 29158 268530 213178 213178 1 LQFPQSQAEYIEK Unmodified 1579.7882 0.7882229 4698 Q9NWK9 ZNHIT6 Box C/D snoRNA protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.64 2.9 1 1 9 2 1 1 1 1 1 1 1 1 1 69.681 68.916 2 1.7645E-21 86945 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145.28 107.58 111480000 0 50203000 0 4171700 4680100 0 0 4054600 0 8337500 9410200 7669600 5621200 6223700 11113000 31946 4698 29159 268531;268532;268533;268534;268535;268536;268537;268538;268539;268540;268541 213179;213180;213181 213179 3 LQFQQQQNSIHAAK Unmodified 1639.8431 0.84305243 2960 Q6PJT7 ZC3H14 Zinc finger CCCH domain-containing protein 14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.013 36.194 3 0.00052702 39481 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 63.292 63.292 156820000 0 0 0 8502500 7253400 9878600 9949600 12301000 8483500 12765000 13592000 20049000 15148000 20509000 18390000 31947 2960 29160 268542;268543;268544;268545;268546;268547;268548;268549;268550;268551;268552;268553 213182;213183;213184;213185;213186;213187;213188;213189;213190 213187 7 LQFTPQHK Unmodified 997.53451 0.53451481 3735 Q96AC1 FERMT2 Fermitin family homolog 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 31.236 26.716 2 0.01206 33956 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 107.32 67.214 78888000 37260000 0 41629000 0 0 0 0 0 0 0 0 0 0 0 0 31948 3735 29161 268554;268555 213191 213191 1 LQGAASHVPEGFDPTGPAGLGRPTPGLSQGPGK Unmodified 3152.6003 0.60030955 4469 Q9H9B1 EHMT1 Histone-lysine N-methyltransferase EHMT1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 73.683 73.849 4 2.6884E-25 84838 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.647 48.987 199800000 0 0 0 0 0 26284000 7671800 15019000 15668000 23349000 18332000 23388000 13124000 13930000 43035000 31949 4469 29162 268556;268557;268558;268559;268560;268561;268562;268563;268564;268565 213192;213193;213194;213195;213196;213197;213198 213194 6 LQGATCNNNK Unmodified 1118.5139 0.51385572 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 6.261 2.9247 2 2.1882E-16 4894 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 190.26 150.72 59958000 13005000 46954000 0 0 0 0 0 0 0 0 0 0 0 0 0 31950 2392 29163 268566;268567 213199;213200;213201 213200 3 LQGDPDLPMSFTLAIVESDSTIVYYK Unmodified 2901.4358 0.43577813 3569 Q8WW01 TSEN15 tRNA-splicing endonuclease subunit Sen15 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 101.66 95.814 3 1.1975E-08 120977 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.449 63.8 22557000 22557000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31951 3569 29164 268568;268569 213202;213203 213203 2 LQGEAPQSALR Unmodified 1168.62 0.62003536 4363 Q9H2D6 TRIOBP TRIO and F-actin-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 33.209 33.346 2 0.015754 35380 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 54.066 24.399 53606000 0 0 0 5550000 0 6795500 8287300 0 5976600 11841000 0 0 0 6853900 8301200 31952 4363 29165 268570;268571;268572;268573;268574;268575;268576 213204;213205;213206 213206 3 LQGEFQLR Unmodified 989.52943 0.52942943 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.837 51.985 2 0.0044025 57681 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 130.77 49.469 404430000 0 0 0 20319000 19448000 50979000 19681000 30416000 20696000 31636000 31420000 53921000 39839000 31704000 54369000 31953 2392 29166 268577;268578;268579;268580;268581;268582;268583;268584;268585;268586;268587;268588 213207;213208;213209;213210;213211;213212;213213;213214;213215;213216 213209 1 LQGEIAHVK Unmodified 993.56073 0.56072956 79 CON__P35908v2;P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 2 2 1 1 2 2 2 21.227 21.398 2 0.0031256 22957 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 91.069 34.947 + 11032000000 0 0 0 1265700000 449840000 1439100000 610210000 840000000 758610000 1160900000 1054600000 1362000000 1012400000 731870000 347350000 31954 79 29167 268589;268590;268591;268592;268593;268594;268595;268596;268597;268598;268599;268600;268601;268602;268603;268604;268605;268606;268607;268608;268609;268610 213217;213218;213219;213220;213221;213222;213223;213224;213225;213226;213227;213228;213229;213230;213231;213232;213233;213234;213235 213217 19 LQGEIAHVKK Unmodified 1121.6557 0.65569258 79 CON__P35908v2;P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.417 14.579 2 0.0076807 13611 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 111.61 56.995 + 574130000 0 0 0 82791000 31712000 13802000 16359000 74816000 15217000 38807000 46754000 144860000 69128000 24226000 15658000 31955 79 29168 268611;268612;268613;268614;268615;268616;268617;268618;268619;268620;268621;268622 213236;213237 213237 2 LQGEIDR Unmodified 829.42938 0.42938104 470 O75175 CNOT3 CCR4-NOT transcription complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 15.639 15.83 2 0.023364 14571 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.142 14.727 164090000 0 0 0 9566600 7333100 0 12304000 0 10499000 13889000 21829000 29976000 18273000 19965000 20451000 31956 470 29169 268623;268624;268625;268626;268627;268628;268629;268630;268631;268632 213238;213239 213238 2 LQGEVEK Unmodified 801.42323 0.42323303 264 O15212 PFDN6 Prefoldin subunit 6 yes yes 0 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 3 1 8.135 6.5253 2 0.023193 8762 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 105.39 21.776 813030000 0 812880000 152450 0 0 0 0 0 0 0 0 0 0 0 0 31957 264 29170 268633;268634;268635;268636 213240;213241;213242;213243 213242 4 LQGEVVAFDYQSK Unmodified 1482.7355 0.73545904 2673 Q3MHD2 LSM12 Protein LSM12 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.647 66.732 2 0.00028971 75516 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 95.018 86.289 163380000 0 0 0 5453000 7331400 12142000 11870000 11284000 9347100 17134000 14586000 23369000 13157000 12176000 25529000 31958 2673 29171 268637;268638;268639;268640;268641;268642;268643;268644;268645;268646;268647;268648 213244;213245;213246;213247;213248;213249;213250;213251;213252;213253;213254;213255 213251 12 LQGGTPQEPPNPR Unmodified 1389.7001 0.70007659 4321 Q9H0B6 KLC2 Kinesin light chain 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 29.709 29.538 2 6.4816E-08 31908 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 121.9 96.513 251580000 0 17420000 0 16181000 12728000 15570000 16255000 13737000 17046000 20675000 20480000 22401000 30181000 18877000 30032000 31959 4321 29172 268649;268650;268651;268652;268653;268654;268655;268656;268657;268658;268659;268660;268661 213256;213257;213258;213259;213260;213261;213262;213263;213264;213265;213266;213267;213268;213269 213257 13 LQGGTPQEPPNPRMK Unmodified 1648.8355 0.83552421 4321 Q9H0B6 KLC2 Kinesin light chain 2 yes yes 0 0 1 By MS/MS By matching 2 0 2 1 1 37.318 32.345 3 0.011869 44357 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.52 36.421 34638000 28272000 0 6365300 0 0 0 0 0 0 0 0 0 0 0 0 31960 4321 29173 268662;268663 213270 213270 1 LQGHTDVVISTACHPTENIIASAALENDK Unmodified 3103.5244 0.524427 1865 P61964 WDR5 WD repeat-containing protein 5 yes yes 0 0 0 By MS/MS 2 0 1 1 82.78 74.65 4 3.5543E-06 97680 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.254 34.534 19252000 19252000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31961 1865 29174 268664 213271 213271 1 LQGIDLDR Unmodified 928.49779 0.49779495 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 49.52 49.809 2 0.005648 56259 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 106.04 56.683 241370000 0 0 0 0 0 28771000 17919000 26907000 14789000 24414000 0 36319000 21709000 26963000 43575000 31962 3676 29175 268665;268666;268667;268668;268669;268670;268671;268672;268673 213272;213273;213274;213275 213272 3 LQGIDLDRTVQQVNQEK Unmodified 1983.0385 0.038517356 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 4 12 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 69.838 68.68 2;3 9.7735E-36 84920 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 131.56 114.07 403320000 20062000 114700000 48861000 5517000 9328700 18194000 13586000 16001000 13366000 26209000 19061000 25596000 17484000 20272000 35091000 31963 3676 29176 268674;268675;268676;268677;268678;268679;268680;268681;268682;268683;268684;268685;268686;268687;268688;268689 213276;213277;213278;213279;213280;213281;213282;213283;213284;213285;213286;213287;213288;213289;213290;213291;213292 213288 16 LQGILSQSQDK Unmodified 1215.6459 0.64591575 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 40.91 40.665 2 0.0096127 44104 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 61.161 20.81 127430000 0 39203000 0 4790500 3129100 7735500 6839300 5011800 5968800 7424900 8136800 12869000 6877200 8702500 10746000 31964 2291 29177 268690;268691;268692;268693;268694;268695;268696;268697;268698;268699;268700;268701;268702 213293;213294;213295;213296;213297;213298;213299;213300;213301;213302;213303 213301 11 LQGINCGPDFTPSFANLGR Unmodified 2062.9895 0.98945867 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 2 2 2 2 2 2 85.41 85.517 2;3 5.5385E-58 99253 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 178.58 162.05 369170000 0 0 0 0 11245000 24597000 10730000 20231000 25923000 46351000 38141000 75322000 10976000 27061000 78597000 31965 2102 29178 268703;268704;268705;268706;268707;268708;268709;268710;268711;268712;268713;268714;268715;268716;268717;268718;268719;268720;268721;268722;268723;268724 213304;213305;213306;213307;213308;213309;213310;213311;213312;213313;213314;213315;213316;213317;213318 213317 15 LQGINLGLEDDGVADESVK Unmodified 1970.9797 0.97966507 3233 Q8IW35 CEP97 Centrosomal protein of 97 kDa yes yes 0 0 0 By MS/MS By MS/MS By matching By matching 10 0 4 1 1 1 1 79.869 80.043 2 3.6987E-08 92566 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 80.967 65.427 11766000 0 0 0 0 0 0 0 0 0 4860800 3736200 0 0 0 3169200 31966 3233 29179 268725;268726;268727;268728 213319;213320 213319 2 LQGKPQSHELK Unmodified 1263.6935 0.69353465 3225 Q8IVD9 NUDCD3 NudC domain-containing protein 3 yes yes 0 0 1 By MS/MS 2 0 1 1 13.305 9.3102 2 0.00018474 14172 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 116.52 75.489 26847000 26847000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31967 3225 29180 268729 213321 213321 1 LQGLPIVAGTMDIR Oxidation (M) 1498.8177 0.81774888 4639 Q9NTZ6 RBM12 RNA-binding protein 12 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 80.291 80.394 2 0.00030723 93340 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 69.672 48.224 204620000 0 0 0 0 10955000 18662000 13061000 13707000 10521000 20081000 19741000 23973000 13311000 20845000 39759000 31968 4639 29181 268730;268731;268732;268733;268734;268735;268736;268737;268738;268739;268740 213322;213323;213324;213325;213326;213327;213328;213329;213330;213331;213332;213333 213331 6050 11 LQGLPIVAGTMDIR Unmodified 1482.8228 0.82283426 4639 Q9NTZ6 RBM12 RNA-binding protein 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 87.01 87.152 2 0.0020418 100721 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.672 50.693 34722000 0 0 0 0 0 2282600 0 3000700 1559700 4026800 3282700 2975100 0 3595900 13999000 31969 4639 29181 268741;268742;268743;268744;268745;268746;268747;268748 213334;213335;213336;213337;213338;213339;213340 213335 7 LQGNGVAGSPSVVPAAVVSAAHIQTSPQAK Unmodified 2840.5145 0.51445466 3112 Q7Z6J0 SH3RF1 E3 ubiquitin-protein ligase SH3RF1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 80.34 80.443 3 4.4853E-15 92752 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.294 39.087 59325000 0 0 0 0 3691300 5444600 3993400 5083300 4016500 7486000 5114700 10131000 2069800 3819100 8475100 31970 3112 29182 268749;268750;268751;268752;268753;268754;268755;268756;268757;268758;268759 213341;213342;213343;213344;213345;213346;213347;213348 213343 8 LQGPPTPAGK Unmodified 964.53418 0.53418046 1982 P78411 IRX5 Iroquois-class homeodomain protein IRX-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 26.846 27.101 2 0.011702 29197 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 53.775 9.0827 52089000 0 0 0 0 5290700 4196400 5729700 0 3972000 0 5841200 5484600 8202100 6207100 7165300 31971 1982 29183 268760;268761;268762;268763;268764;268765;268766;268767;268768 213349;213350;213351;213352;213353 213349 5 LQGQAPGALEAGAAPAGRR Unmodified 1789.9547 0.95472815 3342 Q8N5A5 ZGPAT Zinc finger CCCH-type with G patch domain-containing protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 40.742 40.922 3 0.00040238 44599 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.127 19.247 103530000 0 0 0 4980400 7577300 9297600 8420800 0 5822600 11305000 11089000 13253000 8181900 7900600 15702000 31972 3342 29184 268769;268770;268771;268772;268773;268774;268775;268776;268777;268778;268779 213354;213355;213356;213357;213358;213359;213360;213361;213362;213363;213364 213357 11 LQGQIRESK Unmodified 1057.588 0.58800695 3008 Q6ZS17 FAM65A Protein FAM65A yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 12.171 9.0467 2 0.0084536 13845 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 137.13 62.715 39317000 35948000 0 3369000 0 0 0 0 0 0 0 0 0 0 0 0 31973 3008 29185 268780;268781 213365 213365 1 LQGQITEGSNMIK Unmodified 1417.7235 0.72351415 635 O95251 KAT7 Histone acetyltransferase KAT7 yes yes 0 0 0 By MS/MS 10 0 1 1 49.734 49.896 2 0.0148 56455 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 58.63 35.485 8817500 0 0 0 0 0 0 0 0 0 8817500 0 0 0 0 0 31974 635 29186 268782 213366 213366 0 LQGQITEGSNMIK Oxidation (M) 1433.7184 0.71842877 635 O95251 KAT7 Histone acetyltransferase KAT7 yes yes 0 1 0 By matching By matching By MS/MS 10 0 3 1 1 1 35.886 36.188 2 0.00073036 39524 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.82 38.306 13888000 0 0 0 0 0 2108200 0 0 0 5654200 0 6125800 0 0 0 31975 635 29186 268783;268784;268785 213367 213367 776 1 LQGQLEQGDDTAAER Unmodified 1629.7594 0.75944196 3421 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 30.33 30.212 2 9.0687E-05 33048 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 79.659 56.339 3536500 0 0 0 0 1811400 0 0 1725200 0 0 0 0 0 0 0 31976 3421 29187 268786;268787;268788 213368;213369;213370 213368 1 LQGQLEQGDDTAAERLEK Unmodified 1999.9811 0.98106206 3421 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.312 45.481 3 1.9064E-72 50730 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 176.94 152.02 525270000 0 0 0 28041000 29231000 41066000 45986000 42678000 32364000 56806000 60090000 57194000 42441000 41511000 47858000 31977 3421 29188 268789;268790;268791;268792;268793;268794;268795;268796;268797;268798;268799;268800 213371;213372;213373;213374;213375;213376;213377;213378;213379;213380;213381;213382;213383 213381 13 LQGSGPLVLTEEEK Unmodified 1498.7879 0.78788854 3027 Q70SY1 CREB3L2 Cyclic AMP-responsive element-binding protein 3-like protein 2;Processed cyclic AMP-responsive element-binding protein 3-like protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 69.64 63.771 2 0.0018897 81297 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.194 55.422 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31978 3027 29189 268801 213384 213384 1 LQGSGVSLASK Unmodified 1045.5768 0.57677356 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31.197 30.566 2 0.00043848 32804 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 85.29 55.105 395840000 9109300 115870000 0 12606000 13881000 15874000 21833000 19366000 18214000 19793000 21215000 31544000 25046000 24108000 47383000 31979 2172 29190 268802;268803;268804;268805;268806;268807;268808;268809;268810;268811;268812;268813;268814;268815 213385;213386;213387;213388;213389;213390;213391;213392;213393;213394;213395;213396 213394 7 LQGSGVTVNALHPGVAR Unmodified 1674.9166 0.91655173 3398 Q8NBN7 RDH13 Retinol dehydrogenase 13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 54.074 54.201 3 0.0002876 62322 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 58.814 45.936 78126000 0 0 0 7347800 9061200 6623800 7515300 9913600 5220400 0 6670600 9259800 9844900 0 6668900 31980 3398 29191 268816;268817;268818;268819;268820;268821;268822;268823;268824;268825 213397;213398;213399;213400;213401;213402;213403;213404;213405;213406 213405 10 LQGSSLSSESAR Unmodified 1220.5997 0.59969384 1181 P25054 APC Adenomatous polyposis coli protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 21.709 21.793 2 0.0035433 22806 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 60.102 27.492 39126000 0 0 0 3594700 2485100 5722000 5374400 0 4087700 4867000 6791400 0 0 6203600 0 31981 1181 29192 268826;268827;268828;268829;268830;268831;268832;268833 213407;213408;213409;213410;213411;213412 213408 6 LQGTEPRPSSSNMK Unmodified 1530.746 0.7460405 4629 Q9NSK0 KLC4 Kinesin light chain 4 yes yes 0 0 1 By MS/MS 2 0 1 1 23.488 18.512 3 0.016231 26414 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 41.577 22.847 15633000 15633000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31982 4629 29193 268834 213413 213413 1 LQGTSSHSADTPEASLDSGEGPSGMASQGCPSASR Oxidation (M) 3434.4587 0.45866821 4872 Q9UER7 DAXX Death domain-associated protein 6 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 44.08 43.852 3 4.9705E-21 49559 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 49.57 49.57 13178000 0 0 0 0 8207200 4970900 0 0 0 0 0 0 0 0 0 31983 4872 29194 268835;268836;268837 213414;213415;213416 213416 6220 3 LQGTSSHSADTPEASLDSGEGPSGMASQGCPSASR Unmodified 3418.4638 0.46375359 4872 Q9UER7 DAXX Death domain-associated protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 52.649 52.685 3 7.1499E-33 59596 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 60.527 58.781 84333000 0 0 0 7880200 4968600 9386900 7016800 6003100 5737700 11007000 10087000 0 12432000 9814800 0 31984 4872 29194 268838;268839;268840;268841;268842;268843;268844;268845;268846;268847 213417;213418;213419;213420;213421;213422;213423;213424;213425 213421 8 LQHAAELIK Unmodified 1021.592 0.59202969 3549 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 30.177 30.39 2 0.008436 31270 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.628 12.907 74402000 0 0 0 0 3242600 14741000 5589600 5903000 3658000 6622200 0 6328300 7915500 8651400 11751000 31985 3549 29195 268848;268849;268850;268851;268852;268853;268854;268855;268856;268857 213426 213426 1 LQHALEDQIYR Unmodified 1384.7099 0.709913 3413 Q8ND04 SMG8 Protein SMG8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 33.736 33.735 2 0.009928 37053 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 50.04 39.33 72003000 0 0 0 7396200 6637100 11026000 8275900 6997200 11193000 10233000 0 0 10245000 0 0 31986 3413 29196 268858;268859;268860;268861;268862;268863;268864;268865 213427 213427 1 LQHFQELGEEK Unmodified 1356.6674 0.66737948 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38.779 38.288 3 0.00022106 42235 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 99.215 74.961 242610000 0 19242000 21529000 8962700 10516000 17779000 15049000 19421000 12205000 19136000 20842000 28437000 14581000 10468000 24438000 31987 2291 29197 268866;268867;268868;268869;268870;268871;268872;268873;268874;268875;268876;268877;268878;268879 213428;213429;213430;213431;213432;213433;213434;213435;213436;213437;213438;213439;213440;213441;213442;213443 213429 15 LQHGSTETASPSIK Unmodified 1454.7365 0.73652168 3432 Q8NEY1 NAV1 Neuron navigator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.59 2.99 3 1 18 1 2 1 2 2 2 1 1 1 1 2 2 1 2 1 20.626 20.055 2;3 1.6653E-13 20794 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 85.163 77.447 330400000 17753000 36691000 20852000 19152000 15857000 20809000 20293000 20179000 17911000 19242000 27235000 30384000 24263000 20803000 18977000 31988 3432 29198 268880;268881;268882;268883;268884;268885;268886;268887;268888;268889;268890;268891;268892;268893;268894;268895;268896;268897;268898;268899;268900;268901 213444;213445;213446;213447;213448;213449;213450;213451;213452;213453;213454;213455;213456;213457;213458;213459 213444 14 LQHGTQQQDLNK Unmodified 1408.7059 0.70589025 1737 P54274 TERF1 Telomeric repeat-binding factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.71 5 11 2 2 1 1 1 1 1 1 1 1 1 1 1 1 9.4934 8.5245 2;3 0.0065996 7211 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 46.592 33.455 77434000 21677000 15955000 4568000 3546700 1875400 3264900 1910300 1482500 2525100 3630900 0 4816400 4775400 2926800 4479400 31989 1737 29199 268902;268903;268904;268905;268906;268907;268908;268909;268910;268911;268912;268913;268914;268915;268916;268917 213460;213461;213462;213463;213464 213464 4 LQHINPLLPACLNK Unmodified 1629.9025 0.90248157 4143 Q9BTE3 MCMBP Mini-chromosome maintenance complex-binding protein yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 74.134 74.31 3 0.0012587 85160 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.797 31.527 24198000 0 0 0 0 0 2360700 0 0 0 2408700 3343700 4330100 0 4062700 7692600 31990 4143 29200 268918;268919;268920;268921;268922;268923 213465;213466 213465 2 LQHLAESWGGK Unmodified 1224.6251 0.62512073 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.629 39.808 3 0.00018248 43209 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 93.345 78.201 185720000 0 0 0 7395900 10905000 15117000 10991000 12579000 6698800 12344000 15715000 17552000 14578000 21956000 39891000 31991 3119 29201 268924;268925;268926;268927;268928;268929;268930;268931;268932;268933;268934;268935 213467;213468;213469;213470;213471;213472;213473;213474 213472 7 LQHLQASLSQR Unmodified 1279.6997 0.69968266 580 O94761 RECQL4 ATP-dependent DNA helicase Q4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 34.077 34.324 3 0.012838 37748 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 42.809 36.078 100100000 0 0 0 0 5313900 5657800 7882000 8339000 6320400 0 14759000 18450000 9861000 9575400 13946000 31992 580 29202 268936;268937;268938;268939;268940;268941;268942;268943;268944;268945 213475;213476;213477;213478;213479 213477 4 LQHLQGSALQK Unmodified 1221.683 0.68296996 434 O60826 CCDC22 Coiled-coil domain-containing protein 22 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 25.353 25.428 3 0.015846 26952 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 29.926 15.691 15381000 0 0 0 0 0 0 8856900 0 6523900 0 0 0 0 0 0 31993 434 29203 268946;268947 213480;213481;213482 213482 3 LQHPDMLVTK Unmodified 1180.6274 0.62742892 4397 Q9H4G0 EPB41L1 Band 4.1-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 48.707 42.907 3 0.012098 53837 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 46.352 31.686 127490000 73578000 36392000 17516000 0 0 0 0 0 0 0 0 0 0 0 0 31994 4397 29204 268948;268949;268950 213483;213484 213484 2 LQHVEDGVLSMQVASAR Unmodified 1838.9309 0.93088116 2135 Q07065 CKAP4 Cytoskeleton-associated protein 4 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 65.66 65.851 3 0.0014802 75189 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 32.858 25.967 22128000 0 0 0 0 0 3312600 2003400 2864000 2611600 3631400 2181600 5523100 0 0 0 31995 2135 29205 268951;268952;268953;268954;268955;268956;268957 213485;213486;213487 213485 2 LQIASDENYK Unmodified 1179.5772 0.57716749 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39.209 38.319 2 2.2332E-09 48207 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 159.58 126.03 650100000 8134700 471020000 2620900 8872200 5516700 15183000 5937000 6884200 6915500 13117000 18584000 25076000 11576000 14575000 36091000 31996 2344 29206 268958;268959;268960;268961;268962;268963;268964;268965;268966;268967;268968;268969;268970;268971;268972 213488;213489;213490;213491;213492;213493;213494;213495;213496;213497;213498;213499;213500;213501;213502;213503 213491 16 LQIASDENYKDPTNLQGK Unmodified 2033.0065 0.006548526 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.22 2.2 1 8 1 1 1 1 1 1 1 1 1 54.406 54.154 3 9.8918E-20 65795 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 99.451 72.642 81707000 0 19375000 0 0 0 0 9798400 9634600 0 5498200 10482000 9438200 2849400 5157300 9474300 31997 2344 29207 268973;268974;268975;268976;268977;268978;268979;268980;268981 213504;213505;213506;213507;213508;213509;213510;213511;213512 213508 8 LQIASESQK Unmodified 1002.5346 0.53457439 413 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.402 22.549 2 0.0036117 23065 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 102.51 17.249 91361000 0 0 0 5690200 4672600 7609000 8007500 5158700 6896000 11096000 14692000 14853000 12687000 0 0 31998 413 29208 268982;268983;268984;268985;268986;268987;268988;268989;268990;268991;268992;268993 213513;213514;213515;213516;213517;213518;213519;213520;213521;213522;213523;213524 213522 11 LQICVEPTSQK Unmodified 1301.6649 0.66493664 4869 Q9UDY8 MALT1 Mucosa-associated lymphoid tissue lymphoma translocation protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 57.436 52.094 2 2.9327E-16 66807 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 160.59 110.55 92471000 0 92471000 0 0 0 0 0 0 0 0 0 0 0 0 0 31999 4869 29209 268994;268995 213525;213526;213527 213525 3 LQIDVDGRK Unmodified 1042.5771 0.57710791 2168 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 33.99 34.312 2 0.041505 36584 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 84.498 17.328 25535000 0 0 0 0 0 0 0 0 0 0 0 0 12709000 12826000 0 32000 2168 29210 268996;268997 213528;213529 213528 2 LQIELGK Unmodified 799.48035 0.48035398 1111 P20700 LMNB1 Lamin-B1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 52.406 52.687 2 0.03357 59804 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 71.852 0 71676000 0 0 0 0 0 9629800 6766700 0 0 14866000 14547000 16230000 9636300 0 0 32001 1111 29211 268998;268999;269000;269001;269002;269003 213530;213531;213532;213533;213534;213535 213534 6 LQIFSVEGQK Unmodified 1147.6237 0.62372375 28 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 67.729 67.545 2 0.026694 77756 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 44.203 29.996 39953000 0 0 0 7395000 5366500 11641000 7495700 0 0 0 0 0 8054600 0 0 32002 28 29212 269004;269005;269006;269007;269008 213536 213536 1 LQILNLGAK Unmodified 968.60187 0.6018661 128 O00203 AP3B1 AP-3 complex subunit beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 74.909 73.586 2 0.00043486 93214 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.25 14.619 488480000 41695000 26920000 4053100 27624000 24389000 52226000 41779000 36688000 36954000 44207000 46871000 0 0 45870000 59204000 32003 128 29213 269009;269010;269011;269012;269013;269014;269015;269016;269017;269018;269019;269020;269021;269022 213537;213538;213539;213540;213541;213542;213543;213544;213545;213546;213547;213548;213549;213550;213551;213552;213553 213542 16 LQILSLR Unmodified 841.53854 0.53853756 2530 Q15404 RSU1 Ras suppressor protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 73.283 73.321 2 0.031266 83667 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.975 4.585 25953000 0 0 0 2683400 0 5551300 2964100 0 1923600 4228200 0 0 0 0 8602800 32004 2530 29214 269023;269024;269025;269026;269027;269028 213554 213554 1 LQIQCVVEDDK Unmodified 1345.6548 0.65476588 1255;1174 P29692;P24534 EEF1D;EEF1B2 Elongation factor 1-delta;Elongation factor 1-beta no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.41 3.95 1 7 2 12 2 6 2 1 1 1 1 1 1 1 1 1 1 1 1 63.128 61.652 2 4.3152E-19 72590 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 208.03 133.9 11517000000 362070000 9280600000 49475000 68984000 68945000 149840000 96605000 77719000 65260000 149730000 221620000 218300000 104560000 185550000 417880000 32005 1255;1174 29215 269029;269030;269031;269032;269033;269034;269035;269036;269037;269038;269039;269040;269041;269042;269043;269044;269045;269046;269047;269048;269049;269050 213555;213556;213557;213558;213559;213560;213561;213562;213563;213564;213565;213566;213567;213568;213569;213570;213571;213572;213573;213574;213575;213576;213577;213578;213579;213580;213581;213582;213583 213568 29 LQIQVDEK Unmodified 971.52876 0.52876073 4352 Q9H1K1 ISCU Iron-sulfur cluster assembly enzyme ISCU, mitochondrial yes yes 0 0 0 By MS/MS 2 0 2 2 42.748 40.114 2 0.01816 51942 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.142 24.385 38036000 0 38036000 0 0 0 0 0 0 0 0 0 0 0 0 0 32006 4352 29216 269051;269052 213584 213584 1 LQISTNLQR Unmodified 1071.6037 0.60365701 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.398 49.557 2 0.0052332 56131 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 79.474 28.128 368710000 0 0 0 18901000 28204000 35213000 29992000 22247000 22569000 27372000 43748000 26695000 32555000 34235000 46980000 32007 3676 29217 269053;269054;269055;269056;269057;269058;269059;269060;269061;269062;269063;269064 213585;213586;213587;213588;213589;213590;213591;213592;213593;213594 213585 10 LQIVEMPLAHK Oxidation (M) 1293.7115 0.7114929 1624 P50454 SERPINH1 Serpin H1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 9 2.56 1 1 13 1 1 2 2 1 1 1 1 2 1 2 52.567 52.251 2;3 0.00071199 57432 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.385 51.521 762600000 0 41851000 309490000 0 0 44986000 36198000 0 21990000 49858000 17322000 15560000 48501000 43949000 132890000 32008 1624 29218 269065;269066;269067;269068;269069;269070;269071;269072;269073;269074;269075;269076;269077;269078;269079 213595;213596;213597;213598;213599;213600;213601;213602;213603;213604;213605 213598 2604 11 LQIVEMPLAHK Unmodified 1277.7166 0.71657828 1624 P50454 SERPINH1 Serpin H1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.52 3.11 5 22 2 1 2 2 2 2 2 2 2 2 2 2 2 2 72.877 71.96 2;3 5.7251E-07 89410 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 135.79 79.78 3068000000 1967300000 333520000 311370000 15386000 15840000 0 21132000 30265000 21451000 33657000 45984000 49452000 26558000 54906000 141210000 32009 1624 29218 269080;269081;269082;269083;269084;269085;269086;269087;269088;269089;269090;269091;269092;269093;269094;269095;269096;269097;269098;269099;269100;269101;269102;269103;269104;269105;269106 213606;213607;213608;213609;213610;213611;213612;213613;213614;213615;213616 213613 5 LQIWDTAGQESFR Unmodified 1549.7525 0.75250609 1828 P61019;Q8WUD1 RAB2A;RAB2B Ras-related protein Rab-2A;Ras-related protein Rab-2B yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.419 77.477 2 1.1834E-19 89303 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 154.24 123.99 298650000 0 0 0 7735800 11050000 20890000 12823000 34119000 19630000 33807000 29096000 32568000 18981000 21312000 56644000 32010 1828 29219 269107;269108;269109;269110;269111;269112;269113;269114;269115;269116;269117;269118 213617;213618;213619;213620;213621;213622;213623;213624;213625;213626;213627;213628 213623 12 LQIYEEISK Unmodified 1121.5968 0.5968403 2895 Q6N069 NAA16 N-alpha-acetyltransferase 16, NatA auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 61.261 61.274 2 2.4357E-05 69802 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 149.94 58.895 370120000 0 0 0 4636600 20604000 0 24428000 0 44048000 58705000 89553000 128140000 0 0 0 32011 2895 29220 269119;269120;269121;269122;269123;269124;269125;269126 213629;213630;213631;213632;213633;213634;213635;213636 213634 7 LQIYGAGPK Unmodified 945.52837 0.5283668 1436 P41229 KDM5C Lysine-specific demethylase 5C yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 50.286 43.452 2 0.021378 56695 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.127 18.006 68597000 32300000 36297000 0 0 0 0 0 0 0 0 0 0 0 0 0 32012 1436 29221 269127;269128 213637;213638 213637 2 LQKEAGTPPLWK Unmodified 1366.7609 0.76088593 1766 P55265 ADAR Double-stranded RNA-specific adenosine deaminase yes yes 0 0 1 By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 10 0 8 1 1 1 1 1 1 1 1 60.661 60.812 3 0.042957 69457 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 26.659 8.9197 17722000 0 0 0 1321500 0 0 1537200 0 2934400 2119300 0 2462800 2103600 1027400 4215700 32013 1766 29222 269129;269130;269131;269132;269133;269134;269135;269136 213639 213639 1 LQKEEEIEFLYNENTVR Unmodified 2153.0641 0.064063405 1441 P41252 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS 10 0 1 1 75.346 75.658 3 0.012922 86801 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.577 24.267 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32014 1441 29223 269137 213640 213640 1 LQKPTDSTASSR Unmodified 1289.6575 0.65754307 5059 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 9.5522 9.7007 3 0.0012212 7612 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.11 39.117 113540000 0 0 0 8918100 6932600 0 10941000 5851100 5081300 9932300 16103000 18357000 8244800 8989800 14190000 32015 5059 29224 269138;269139;269140;269141;269142;269143;269144;269145;269146;269147;269148 213641;213642;213643;213644;213645;213646;213647;213648;213649;213650;213651 213643 11 LQLANEEIAQVR Unmodified 1382.7518 0.75177781 5273 Q9Y6A5 TACC3 Transforming acidic coiled-coil-containing protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 66.168 65.974 2 0.0045023 76033 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 57.347 29.605 4600400 0 0 0 0 1718000 0 0 0 0 2882300 0 0 0 0 0 32016 5273 29225 269149;269150;269151;269152;269153;269154 213652;213653;213654;213655;213656;213657 213657 6 LQLANEEIAQVRSK Unmodified 1597.8788 0.87876924 5273 Q9Y6A5 TACC3 Transforming acidic coiled-coil-containing protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 63.979 57.986 3 0.0054416 75151 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 44.807 37.275 46383000 32601000 8489800 5292200 0 0 0 0 0 0 0 0 0 0 0 0 32017 5273 29226 269155;269156;269157 213658;213659 213658 1 LQLDNQYAVLENQK Unmodified 1674.8577 0.85769944 4980 Q9UKY7 CDV3 Protein CDV3 homolog yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 6.2 3.82 3 2 5 1 4 1 1 1 1 1 72.915 70.518 2;3 1.3437E-66 87810 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 248.21 213.45 985990000 6358500 925170000 0 0 0 0 1883500 0 0 0 10420000 12668000 0 8549500 20949000 32018 4980 29227 269158;269159;269160;269161;269162;269163;269164;269165;269166;269167 213660;213661;213662;213663;213664;213665;213666;213667 213660 8 LQLDSPEDAEFIVAK Unmodified 1673.8512 0.85121708 308 O43242 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 82.382 81.733 2 6.9503E-45 100721 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 174.84 146.83 3468200000 0 2568000000 28891000 28310000 76480000 84814000 18964000 30725000 24357000 160740000 140160000 191260000 13080000 30352000 72062000 32019 308 29228 269168;269169;269170;269171;269172;269173;269174;269175;269176;269177;269178;269179;269180;269181;269182 213668;213669;213670;213671;213672;213673;213674;213675;213676;213677;213678;213679;213680;213681;213682;213683 213673 15 LQLEACETR Unmodified 1118.539 0.53900784 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS 10 0 1 1 36.604 36.944 2 0.034602 40822 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 46.447 0.02088 14936000 0 0 0 0 0 0 0 0 0 0 0 0 14936000 0 0 32020 2501 29229 269183 213684 213684 1 LQLEETDHQK Unmodified 1239.6095 0.60953025 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 13 1 1 1 2 1 1 1 1 1 1 1 1 21.464 21.669 2;3 0.0045431 22738 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 63.184 50.093 250650000 0 0 0 39565000 14286000 25762000 21005000 9670600 15733000 19317000 23503000 32206000 16319000 15354000 17932000 32021 2501 29230 269184;269185;269186;269187;269188;269189;269190;269191;269192;269193;269194;269195;269196 213685;213686;213687;213688;213689;213690;213691;213692;213693;213694 213694 10 LQLELSK Unmodified 829.49092 0.49091866 757 P02545 LMNA Prelamin-A/C;Lamin-A/C yes yes 0 0 0 By MS/MS 10 0 1 1 51.525 51.594 2 0.023899 58137 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 94.262 7.3957 131980000 0 0 0 0 0 131980000 0 0 0 0 0 0 0 0 0 32022 757 29231 269197 213695 213695 1 LQLERPVSPETQADLQR Unmodified 1979.0436 0.043602734 4802 Q9P206 KIAA1522 Uncharacterized protein KIAA1522 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.699 58.811 3 5.9062E-32 66941 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 99.021 65.225 265870000 0 0 0 14729000 17956000 17730000 20254000 18700000 16346000 25192000 23020000 26839000 29373000 19339000 36388000 32023 4802 29232 269198;269199;269200;269201;269202;269203;269204;269205;269206;269207;269208;269209 213696;213697;213698;213699;213700;213701;213702;213703;213704;213705;213706;213707;213708 213697 12 LQLETEIEALK Unmodified 1285.7129 0.71293269 814 P05783 KRT18 Keratin, type I cytoskeletal 18 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 81.062 80.793 2 4.4069E-07 100339 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.56 41.065 1289300000 386880 110650000 0 19016000 69353000 83305000 73366000 43028000 129190000 158890000 117990000 89127000 60961000 117810000 216270000 32024 814 29233 269210;269211;269212;269213;269214;269215;269216;269217;269218;269219;269220;269221;269222;269223;269224;269225 213709;213710;213711;213712;213713;213714;213715;213716;213717;213718;213719;213720;213721;213722;213723 213712 15 LQLGIEEDLAEPSK Unmodified 1540.7985 0.79845323 3157 Q86UV5 USP48 Ubiquitin carboxyl-terminal hydrolase 48 yes yes 0 0 0 By MS/MS 3 0 1 1 79.866 76.534 2 0.0010246 91942 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 91.961 73.825 9772700 0 9772700 0 0 0 0 0 0 0 0 0 0 0 0 0 32025 3157 29234 269226 213724 213724 1 LQLGTPPPLLAAR Unmodified 1345.8082 0.80817048 4822 Q9P2N5 RBM27 RNA-binding protein 27 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.795 82.859 2 6.7659E-08 95869 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 99.653 71.444 127590000 0 0 0 3679900 6239200 9158400 6702600 7256500 7309400 11276000 9675000 15525000 11589000 14461000 24722000 32026 4822 29235 269227;269228;269229;269230;269231;269232;269233;269234;269235;269236;269237;269238 213725;213726;213727;213728;213729;213730;213731;213732;213733;213734;213735;213736 213726 12 LQLHESQK Unmodified 981.52434 0.52434406 2399 Q14247 CTTN Src substrate cortactin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 12.689 11.905 2 0.0060667 15858 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 139.97 40.596 418160000 150950000 85030000 115610000 0 7266200 0 8216900 7335600 6080300 11335000 0 0 11866000 10732000 3749000 32027 2399 29236 269239;269240;269241;269242;269243;269244;269245;269246;269247;269248;269249 213737;213738;213739;213740;213741;213742;213743;213744 213740 6 LQLLEDDK Unmodified 972.51278 0.51277632 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.39 3.7 5 1 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 50.925 48.988 2 0.0005545 63361 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 162.5 104.94 2391100000 108230000 1420100000 17680000 39227000 36625000 73729000 80635000 53058000 42114000 67727000 92583000 83164000 68155000 72388000 135670000 32028 894 29237 269250;269251;269252;269253;269254;269255;269256;269257;269258;269259;269260;269261;269262;269263;269264;269265;269266;269267 213745;213746;213747;213748;213749;213750;213751;213752;213753;213754;213755;213756;213757;213758;213759;213760;213761;213762;213763;213764 213750 19 LQLLEEK Unmodified 871.50148 0.50148335 3255 Q8IX12 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 50.418 49.112 2 0.0165 61262 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 117.93 20.866 1560900000 19682000 419120000 9403000 55818000 53028000 50774000 81789000 81713000 102280000 121370000 101900000 97274000 105280000 89421000 172020000 32029 3255 29238 269268;269269;269270;269271;269272;269273;269274;269275;269276;269277;269278;269279;269280;269281;269282;269283 213765;213766;213767;213768;213769;213770 213767 5 LQLLEEKTDEDEK Unmodified 1588.7832 0.7831971 3255 Q8IX12 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 44.969 45.152 3 0.0027224 50086 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 52.816 36.935 137610000 0 0 0 10872000 13775000 0 12436000 14691000 6695000 7865600 13398000 16355000 14246000 10570000 16705000 32030 3255 29239 269284;269285;269286;269287;269288;269289;269290;269291;269292;269293;269294 213771;213772;213773;213774;213775;213776 213774 4 LQLLEPFDK Unmodified 1101.607 0.60701105 4061 Q99798 ACO2 Aconitate hydratase, mitochondrial yes yes 0 0 0 By MS/MS 10 0 1 1 80.424 80.654 2 0.040237 92899 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.582 32.397 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32031 4061 29240 269295 213777 213777 1 LQLLLLNPLK Unmodified 1163.7642 0.7641804 3087 Q7Z3U7 MON2 Protein MON2 homolog yes yes 0 0 0 By MS/MS 10 0 1 1 92.989 93.127 2 0.0069846 107996 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.565 28.757 1631700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1631700 32032 3087 29241 269296 213778;213779 213779 2 LQLLSLVTK Unmodified 1013.6485 0.64848194 400 O60443 DFNA5 Non-syndromic hearing impairment protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 85.726 84.643 2 0.0044876 97834 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 86.67 55.441 146950000 13085000 8556000 989390 0 0 18078000 9405200 6351000 6888400 20799000 10166000 10812000 6476900 10552000 24788000 32033 400 29242 269297;269298;269299;269300;269301;269302;269303;269304;269305;269306;269307;269308;269309 213780;213781;213782;213783;213784;213785;213786;213787;213788;213789;213790;213791 213781 9 LQLLSQIR Unmodified 969.59712 0.59711507 4448 Q9H8E8 CSRP2BP Cysteine-rich protein 2-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 70.592 70.664 2 0.012232 81115 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 75.109 17.828 40255000 0 0 0 2709800 3431900 5053400 1695900 2474500 2046100 0 6661500 6708200 2416800 2347500 4709300 32034 4448 29243 269310;269311;269312;269313;269314;269315;269316;269317;269318;269319;269320 213792;213793;213794;213795;213796;213797;213798 213794 7 LQLMVEEQDNLNK Unmodified 1572.7818 0.78175731 3242 Q8IWJ2 GCC2 GRIP and coiled-coil domain-containing protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 73.228 67.683 2 0.0030067 85616 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.26 65.534 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32035 3242 29244 269321 213799 213799 1 LQLNIVEMK Unmodified 1086.6107 0.61071622 579 O94760 DDAH1 N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 yes yes 0 0 0 By MS/MS 10 0 1 1 76.384 76.671 2 0.0189 88124 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.436 25.02 9425300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9425300 32036 579 29245 269322 213800 213800 1 LQLPNMK Unmodified 842.46841 0.46840908 3735 Q96AC1 FERMT2 Fermitin family homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 55.097 55.433 2 0.026582 63035 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 78.445 68.261 56452000 0 0 0 0 0 11782000 0 0 0 8938800 0 11439000 0 9907600 14384000 32037 3735 29246 269323;269324;269325;269326;269327 213801 213801 1 LQLQADRHQEHIR Unmodified 1642.8652 0.86518486 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 2 2 1 2 1 2 1 1 1 25.559 25.841 3;4 5.8987E-08 27934 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 99.531 67.704 235740000 0 0 0 0 0 50628000 7626900 10772000 35399000 0 15925000 24079000 20203000 21987000 49118000 32038 3676 29247 269328;269329;269330;269331;269332;269333;269334;269335;269336;269337;269338;269339;269340 213802;213803;213804;213805;213806;213807;213808;213809;213810 213803 7 LQLQEQLQAETELCAEAEELRAR Unmodified 2727.3498 0.34975709 1356 P35579 MYH9 Myosin-9 yes yes 0 0 1 By MS/MS 3 0 1 1 89.3 85.747 3 0.0020367 87726 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 41.136 30.147 11462000 11462000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32039 1356 29248 269341 213811;213812 213812 2 LQLQGLDLSSR Unmodified 1228.6776 0.67755023 1575 P49454 CENPF Centromere protein F yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 74.929 74.967 2 0.008135 85964 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 52.278 14.192 32616000 0 0 0 1663400 678820 0 0 3552400 3182200 0 0 7405800 3810300 4651300 7671600 32040 1575 29249 269342;269343;269344;269345;269346;269347;269348;269349 213813;213814;213815;213816;213817;213818;213819 213814 6 LQLQNPPAIHGSGSGSCQ Unmodified 1849.8741 0.87409456 4388 Q9H410 DSN1 Kinetochore-associated protein DSN1 homolog yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By matching 8.86 2.8 1 6 1 1 1 1 1 1 1 53.199 52.452 2 4.6815E-58 66394 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 185.27 162.79 35128000 0 16698000 0 0 1818700 0 0 4739300 1651300 3561000 3745100 0 0 2914600 0 32041 4388 29250 269350;269351;269352;269353;269354;269355;269356 213820;213821 213820 2 LQLSLADFR Unmodified 1061.5869 0.58694431 167 O00541 PES1 Pescadillo homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 83.034 83.097 2 0.0039296 96156 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 99.442 50.938 118720000 0 0 0 3481400 5792400 17513000 6281700 5986800 6769900 16182000 8672500 11884000 8009900 7455700 20695000 32042 167 29251 269357;269358;269359;269360;269361;269362;269363;269364;269365;269366;269367;269368 213822;213823;213824;213825;213826;213827;213828;213829;213830;213831 213823 9 LQLTDLLIK Unmodified 1055.659 0.65904662 566 O75962 TRIO Triple functional domain protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 88.441 88.544 2 0.045277 102776 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 43.246 19.092 5636200 0 0 0 0 0 1694300 0 0 0 1459400 0 0 0 0 2482500 32043 566 29252 269369;269370;269371 213832 213832 1 LQLVEAECK Unmodified 1088.5536 0.55359527 5171 Q9Y3P9 RABGAP1 Rab GTPase-activating protein 1 yes yes 0 0 0 By matching By MS/MS By matching By matching By matching By matching 10 0 6 1 1 1 1 1 1 43.818 43.815 2 0.011336 49706 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 62.969 31.665 35847000 0 0 0 5429000 3119600 6579500 5292200 0 0 6595000 0 8831600 0 0 0 32044 5171 29253 269372;269373;269374;269375;269376;269377 213833 213833 1 LQLVEAEMLPR Oxidation (M) 1313.7013 0.70132214 5346 yes yes 0 1 0 By MS/MS 10 0 1 1 61.456 62.036 2 0.012905 70643 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.073 37.674 + 33896000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33896000 32045 5346 29254 269378 213834 213834 6736 0 LQLVQGIR Unmodified 925.5709 0.57090032 3133 Q86TB9 PATL1 Protein PAT1 homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.599 58.714 2 0.006533 65800 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 100.07 33.032 822930000 0 0 0 32408000 50431000 58371000 64335000 70130000 55714000 70418000 74486000 115450000 85958000 65373000 79854000 32046 3133 29255 269379;269380;269381;269382;269383;269384;269385;269386;269387;269388;269389;269390 213835;213836;213837;213838;213839;213840;213841;213842;213843;213844;213845;213846 213842 12 LQLVVENSAQR Unmodified 1255.6884 0.68844927 434 O60826 CCDC22 Coiled-coil domain-containing protein 22 yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 51.44 51.604 2 0.0065686 58427 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 65.347 24.318 35945000 0 0 0 0 4022700 0 7399500 0 5304000 0 7431500 0 0 0 11787000 32047 434 29256 269391;269392;269393;269394;269395;269396;269397 213847;213848;213849;213850 213847 4 LQLVVLR Unmodified 839.55927 0.559273 4867 Q9UDY2 TJP2 Tight junction protein ZO-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.964 74.03 2 0.023344 85616 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 91.584 45.233 86841000 0 0 0 8549300 4285500 8660100 5943900 5028000 5908200 9130400 6888300 9968600 4240000 6361300 11877000 32048 4867 29257 269398;269399;269400;269401;269402;269403;269404;269405;269406;269407;269408;269409 213851;213852;213853;213854;213855;213856;213857;213858;213859 213856 9 LQLWDTAGQER Unmodified 1315.6521 0.65206377 1105;4611 P20340;Q14964;Q9NRW1 RAB6A;RAB39A;RAB6B Ras-related protein Rab-6A;Ras-related protein Rab-39A;Ras-related protein Rab-6B no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 2 2 2 1 2 2 2 2 1 1 1 2 63.607 63.671 2 6.347E-06 71242 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 166.07 0 2572000000 0 0 0 108860000 160070000 161840000 178070000 291000000 114430000 216670000 302470000 295470000 163710000 200330000 379070000 32049 1105;4611 29258 269410;269411;269412;269413;269414;269415;269416;269417;269418;269419;269420;269421;269422;269423;269424;269425;269426;269427;269428;269429 213860;213861;213862;213863;213864;213865;213866;213867;213868;213869;213870;213871;213872;213873;213874;213875;213876;213877;213878;213879 213864 20 LQMAIEESK Unmodified 1047.527 0.52704617 5284 Q9Y6I3 EPN1 Epsin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 41.715 42.245 2 0.0072675 46789 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 72.879 38.072 25961000 0 0 0 0 0 0 0 0 0 3565800 5941400 7314800 0 0 9139000 32050 5284 29259 269430;269431;269432;269433 213880;213881;213882;213883 213883 4 LQMASPEEK Oxidation (M) 1047.4907 0.49066067 2743 Q5JVF3 PCID2 PCI domain-containing protein 2 yes yes 0 1 0 By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 2 1 11.015 11.136 2 0.018049 8611 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 49.423 27.895 24549000 0 0 0 1566100 1506900 2640400 1993800 0 2261900 2909300 1913800 7246700 2509800 0 0 32051 2743 29260 269434;269435;269436;269437;269438;269439;269440;269441;269442;269443 213884;213885;213886 213885 4383 3 LQMASPEEK Unmodified 1031.4957 0.49574604 2743 Q5JVF3 PCID2 PCI domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 26.984 27.452 2 0.0034774 28428 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 106.91 82.708 39378000 0 0 0 0 0 0 0 3330700 0 0 6271400 7391700 0 6070400 16314000 32052 2743 29260 269444;269445;269446;269447;269448 213887;213888;213889;213890;213891 213887 5 LQMEAPHIIVGTPGR Oxidation (M) 1633.861 0.86101068 1816 P60842 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 2 1 1 1 1 1 1 1 56.891 56.939 3 2.5738E-05 65750 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 73.707 62.437 297710000 0 0 0 33135000 14946000 63046000 30592000 24988000 12217000 37717000 0 0 25161000 20063000 35844000 32053 1816 29261 269449;269450;269451;269452;269453;269454;269455;269456;269457;269458;269459 213892;213893;213894;213895;213896;213897;213898;213899;213900;213901 213900 2953 9 LQMEAPHIIVGTPGR Unmodified 1617.8661 0.86609606 1816 P60842 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 1 1 2 1 1 1 2 72.937 73.035 2;3 0.00023816 83987 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 65.172 53.38 388050000 0 0 0 15705000 7104700 52117000 11804000 20335000 15082000 32841000 60510000 39732000 18999000 31121000 82697000 32054 1816 29261 269460;269461;269462;269463;269464;269465;269466;269467;269468;269469;269470;269471;269472;269473 213902;213903;213904;213905;213906;213907;213908;213909;213910;213911;213912;213913;213914 213902 12 LQMPSFK Unmodified 849.44186 0.44185998 3226 Q8IVF2 AHNAK2 Protein AHNAK2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.552 63.644 2 0.023411 73014 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 91.906 62.568 99345000 0 0 0 5336300 5221800 6542500 5763800 8637400 5097100 8443700 8192300 13356000 8740400 7890400 16123000 32055 3226 29262 269474;269475;269476;269477;269478;269479;269480;269481;269482;269483;269484;269485 213915;213916;213917;213918;213919;213920;213921;213922;213923 213921 9 LQNAFWEHGASR Unmodified 1414.6742 0.67419619 3542 Q8WUF5 PPP1R13L RelA-associated inhibitor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 49.32 49.498 3 0.0049205 55674 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 40.025 35.395 242120000 0 0 0 0 12178000 21921000 19664000 18153000 27043000 26236000 30484000 0 28249000 19135000 39056000 32056 3542 29263 269486;269487;269488;269489;269490;269491;269492;269493;269494;269495 213924;213925;213926;213927;213928 213927 5 LQNALNEQR Unmodified 1084.5625 0.56252048 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 21.332 21.44 2 0.0089221 22183 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 68.224 23.142 10523000 0 0 0 2590600 0 0 0 0 5037600 0 0 0 2895200 0 0 32057 2459 29264 269496;269497;269498;269499;269500;269501;269502 213929;213930;213931;213932;213933;213934;213935 213934 7 LQNATPTNFK Unmodified 1132.5877 0.58767259 4724 Q9NXF1 TEX10 Testis-expressed sequence 10 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 33.147 33.282 2 0.001548 36386 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 93.143 70.43 110390000 0 0 0 7159400 5935300 6591700 6981700 7737400 5608600 11253000 12357000 0 20031000 13473000 13263000 32058 4724 29265 269503;269504;269505;269506;269507;269508;269509;269510;269511;269512;269513 213936;213937;213938;213939;213940;213941;213942;213943;213944;213945;213946;213947;213948 213942 13 LQNDFAEK Unmodified 963.46616 0.46616048 1406;2357 P39880;Q13948 CUX1 Homeobox protein cut-like 1;Protein CASP no no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 24.678 24.24 2 0.0048728 25884 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 109.01 79.674 352360000 0 119020000 0 15907000 14131000 15360000 15522000 13232000 12948000 17318000 25659000 25553000 19428000 17366000 40916000 32059 1406;2357 29266 269514;269515;269516;269517;269518;269519;269520;269521;269522;269523;269524;269525;269526;269527 213949;213950;213951;213952;213953;213954;213955;213956;213957;213958;213959;213960;213961;213962;213963 213958 13 LQNELDLTK Unmodified 1072.5764 0.57643921 3385 Q8NB25 FAM184A Protein FAM184A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 7.67 3.3 1 2 1 1 1 48.562 47.12 2 0.0034132 52425 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 105.57 2.0045 36985000 0 6852100 0 0 0 0 0 0 0 0 0 0 17818000 12315000 0 32060 3385 29267 269528;269529;269530 213964;213965;213966 213965 2 LQNELDTLK Unmodified 1072.5764 0.57643921 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 48.517 47.259 2 0.00094538 60841 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 143.01 11.948 518640000 6667700 334770000 3952600 9003800 12418000 13892000 15105000 12063000 10394000 22958000 21876000 25981000 0 0 29556000 32061 1286 29268 269531;269532;269533;269534;269535;269536;269537;269538;269539;269540;269541;269542;269543 213967;213968;213969;213970;213971;213972;213973;213974;213975;213976;213977;213978;213979 213971 11 LQNFAQLPAHR Unmodified 1293.6942 0.69420335 1459 P42575 CASP2 Caspase-2;Caspase-2 subunit p18;Caspase-2 subunit p13;Caspase-2 subunit p12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 49.697 49.812 3 0.00028135 56334 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 65.278 61.195 126820000 0 0 0 0 13002000 25265000 18287000 16075000 10585000 16871000 0 0 0 0 26733000 32062 1459 29269 269544;269545;269546;269547;269548;269549;269550 213980;213981;213982;213983;213984;213985;213986 213980 7 LQNFSYDQR Unmodified 1169.5465 0.54653606 4639 Q9NTZ6 RBM12 RNA-binding protein 12 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 39.278 39.679 2 0.0077875 44143 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 71.501 60.133 19945000 0 0 0 0 0 0 4298800 0 0 4423000 0 3970900 0 2868500 4383800 32063 4639 29270 269551;269552;269553;269554;269555 213987;213988;213989;213990 213987 4 LQNGLQALLISDLSNMEGK Unmodified 2043.067 0.067040293 375 O43847 NRD1 Nardilysin yes yes 0 0 0 By MS/MS 2 0 1 1 99.943 95.23 2 5.7197E-12 117757 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.631 69.619 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32064 375 29271 269556 213991 213991 1 LQNGLQALLISDLSNMEGK Oxidation (M) 2059.062 0.061954915 375 O43847 NRD1 Nardilysin yes yes 0 1 0 By MS/MS 2 0 1 1 97.095 88.964 3 0.00021927 114922 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.347 51.254 12323000 12323000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32065 375 29271 269557 213992 213992 474 1 LQNIIDNQK Unmodified 1084.5877 0.58767259 214 O14777 NDC80 Kinetochore protein NDC80 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 34.589 34.977 2 0.01656 38003 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 56.434 35.134 17750000 0 0 0 0 0 0 0 0 0 0 10937000 0 0 6812700 0 32066 214 29272 269558;269559;269560;269561 213993;213994;213995;213996 213994 3 LQNIRDNVEK Unmodified 1227.6571 0.65714914 4316 Q9H081 MIS12 Protein MIS12 homolog yes yes 0 0 1 By MS/MS By matching 2 0 2 1 1 26.653 22.413 2 0.0063357 31991 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 91.095 44.633 18365000 16728000 0 1636400 0 0 0 0 0 0 0 0 0 0 0 0 32067 4316 29273 269562;269563 213997 213997 0 LQNLEGK Unmodified 800.43922 0.43921744 3358 Q8N6H7 ARFGAP2 ADP-ribosylation factor GTPase-activating protein 2 yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 14.841 14.482 2 0.014121 17363 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.48 47.929 199640000 0 59725000 0 5999900 3385300 8838800 7227100 6396400 7946100 15694000 18454000 19413000 13769000 6430600 26362000 32068 3358 29274 269564;269565;269566;269567;269568;269569;269570;269571;269572;269573;269574;269575;269576;269577 213998;213999;214000;214001 213998 3 LQNLFVDDSGR Unmodified 1262.6255 0.62551466 2933 Q6P3X3 TTC27 Tetratricopeptide repeat protein 27 yes yes 0 0 0 By MS/MS 10 0 1 1 33.447 33.04 2 0.026964 36526 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 40.045 0 8978500 0 0 0 8978500 0 0 0 0 0 0 0 0 0 0 0 32069 2933 29275 269578 214002 214002 1 LQNLQLQPGNAK Unmodified 1322.7306 0.73064844 1136 P22307 SCP2 Non-specific lipid-transfer protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 47.868 47.142 2 2.374E-05 60276 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.69 85.164 93469000 0 39107000 0 4108300 3818900 4358100 3734000 4885100 2925100 6108900 6979100 0 5196600 5936600 6311200 32070 1136 29276 269579;269580;269581;269582;269583;269584;269585;269586;269587;269588;269589;269590;269591 214003;214004;214005;214006;214007;214008;214009;214010;214011;214012 214007 10 LQNLSLEGLR Unmodified 1141.6455 0.64552182 2267 Q13309 SKP2 S-phase kinase-associated protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 70.341 70.479 2 0.0015959 81085 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 93.649 39.492 48497000 0 0 0 0 1837200 3997800 4645900 3400000 2769000 3861900 4166500 5599200 3228300 5175100 9815800 32071 2267 29277 269592;269593;269594;269595;269596;269597;269598;269599;269600;269601;269602 214013;214014;214015;214016;214017;214018;214019 214014 7 LQNMLEEQLTK Unmodified 1345.6912 0.69115139 2689 Q4V328 GRIPAP1 GRIP1-associated protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 67.473 67.752 2 0.0014233 77760 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 72.848 46.464 28916000 0 0 0 0 0 0 2447800 0 2517500 3544500 5432000 4678500 0 0 10296000 32072 2689 29278 269603;269604;269605;269606;269607;269608;269609 214020;214021;214022;214023;214024 214023 5 LQNNNVYTIAK Unmodified 1276.6776 0.67755023 1937 P63010 AP2B1 AP-2 complex subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43.213 42.207 2 0.00033962 47850 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 99.815 66.552 911730000 13326000 556820000 2268500 19845000 19132000 31193000 21808000 26674000 17314000 35057000 30463000 44462000 33427000 22332000 37608000 32073 1937 29279 269610;269611;269612;269613;269614;269615;269616;269617;269618;269619;269620;269621;269622;269623;269624 214025;214026;214027;214028;214029;214030;214031;214032;214033;214034;214035;214036;214037;214038 214038 11 LQNSYQPTNK Unmodified 1191.5884 0.58840088 3041 Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 17.317 17.503 2 9.6474E-24 16945 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 176.6 132.83 509910000 0 0 0 31066000 27966000 39490000 37919000 34984000 29980000 44711000 49033000 60800000 52748000 43011000 58204000 32074 3041 29280 269625;269626;269627;269628;269629;269630;269631;269632;269633;269634;269635;269636 214039;214040;214041;214042;214043;214044;214045;214046;214047;214048;214049 214044 8 LQNSYTASQR Unmodified 1166.568 0.56799978 2738 Q5JTD0 TJAP1 Tight junction-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 16.012 16.082 2 0.019804 15856 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 47.603 36.73 7098400 0 0 0 0 0 0 4401900 0 2696500 0 0 0 0 0 0 32075 2738 29281 269637;269638 214050;214051 214050 2 LQNVEQLPPDEIK Unmodified 1521.8039 0.80387296 3643 Q92621 NUP205 Nuclear pore complex protein Nup205 yes yes 0 0 0 By MS/MS 2 0 2 2 65.396 59.478 2 0.00065486 76345 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.7 85.914 32655000 0 32655000 0 0 0 0 0 0 0 0 0 0 0 0 0 32076 3643 29282 269639;269640 214052;214053 214053 2 LQNVNRDIQR Unmodified 1254.6793 0.67928157 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 20.36 20.587 3 0.0012221 20823 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 101.38 56.517 236900000 0 0 0 19247000 11956000 0 18905000 16339000 20844000 0 30294000 35752000 32727000 26139000 24696000 32077 3676 29283 269641;269642;269643;269644;269645;269646;269647;269648;269649;269650 214054;214055;214056;214057;214058;214059;214060;214061;214062;214063 214062 10 LQNYGELGPGTTGASSSGAGLHWGGPTQSSAYGK Unmodified 3292.5385 0.53849716 4752 Q9NYV4 CDK12 Cyclin-dependent kinase 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 75.259 74.618 3 3.1636E-65 85999 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.043 90.959 113880000 14363000 0 0 0 4109000 6265900 2547400 9566800 0 17030000 12560000 9135100 7179300 6017800 25109000 32078 4752 29284 269651;269652;269653;269654;269655;269656;269657;269658;269659;269660;269661 214064;214065;214066;214067;214068;214069;214070;214071;214072 214066 9 LQPALPPEAQSVPELEEVAR Unmodified 2172.1426 0.14264808 3542 Q8WUF5 PPP1R13L RelA-associated inhibitor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 2 2 2 2 2 2 85.198 85.304 2;3 2.8801E-09 98648 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 75.358 70.92 401290000 0 0 0 0 29967000 25406000 24394000 27063000 30860000 50523000 42035000 48023000 18534000 30379000 74111000 32079 3542 29285 269662;269663;269664;269665;269666;269667;269668;269669;269670;269671;269672;269673;269674;269675;269676;269677;269678;269679;269680;269681;269682;269683 214073;214074;214075;214076;214077;214078;214079;214080;214081;214082;214083;214084;214085;214086;214087;214088;214089;214090;214091;214092 214077 20 LQPAYQVTLPGQEPIVK Unmodified 1880.0407 0.040749188 1433 P41214 EIF2D Eukaryotic translation initiation factor 2D yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 8.86 2.8 1 6 1 1 1 1 1 1 1 80.39 79.814 2 0.00093559 98466 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.541 65.141 146090000 0 127150000 0 0 0 2332600 0 0 0 3302800 0 3541600 2069000 2896800 4802300 32080 1433 29286 269684;269685;269686;269687;269688;269689;269690 214093;214094 214093 2 LQPEEADVPAYPK Unmodified 1455.7246 0.72456001 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 54.804 55.008 2 0.00083437 61750 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83 65.487 136550000 0 0 0 0 10072000 9661500 14128000 10077000 11320000 14056000 14436000 16331000 11127000 10968000 14370000 32081 4139 29287 269691;269692;269693;269694;269695;269696;269697;269698;269699;269700;269701 214095;214096;214097;214098;214099;214100;214101;214102;214103;214104;214105 214098 11 LQPEGQTSGSSR Unmodified 1245.5949 0.59494282 460 O75145 PPFIA3 Liprin-alpha-3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 9.6514 9.7886 2 0.044618 7495 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.866 14.08 11789000 0 0 0 0 825040 864330 1207900 801380 811280 768510 0 1986900 1419200 881670 2222900 32082 460 29288 269702;269703;269704;269705;269706;269707;269708;269709;269710;269711 214106 214106 1 LQPFATEADVEEALR Unmodified 1687.8417 0.84171503 1333 P33992 MCM5 DNA replication licensing factor MCM5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 83.422 83.52 2 1.0127E-05 96645 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 80.69 52.677 152930000 0 0 0 0 4488900 10191000 0 8664200 8829200 5469500 18513000 20925000 6578300 15941000 53328000 32083 1333 29289 269712;269713;269714;269715;269716;269717;269718;269719;269720;269721 214107;214108;214109 214109 1 LQPFLQR Unmodified 900.51814 0.51813647 1502 P46379 BAG6 Large proline-rich protein BAG6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.029 52.176 2 0.049238 59082 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 110.23 110.23 632730000 0 0 0 22157000 31645000 61136000 36889000 41618000 36886000 54553000 70687000 86614000 53720000 54503000 82321000 32084 1502 29290 269722;269723;269724;269725;269726;269727;269728;269729;269730;269731;269732;269733 214110 214110 0 LQPGDMAAITTK Unmodified 1244.6435 0.64347291 2540 Q15477 SKIV2L Helicase SKI2W yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 1 1 6 2 1 1 1 1 1 1 57.972 56.881 2 0.0050322 72244 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.944 53.438 227690000 0 197680000 0 0 0 3889200 0 0 2060100 4838400 5256300 5488900 0 0 8482900 32085 2540 29291 269734;269735;269736;269737;269738;269739;269740;269741 214111;214112;214113;214114 214112 4 LQPGDMAAITTK Oxidation (M) 1260.6384 0.63838754 2540 Q15477 SKIV2L Helicase SKI2W yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 37.233 32.475 2 0.030907 42393 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 48.188 35.904 49938000 0 49938000 0 0 0 0 0 0 0 0 0 0 0 0 0 32086 2540 29291 269742;269743 214115 214115 1 LQPGIAQQWIQSK Unmodified 1495.8147 0.81471242 320 O43353 RIPK2 Receptor-interacting serine/threonine-protein kinase 2 yes yes 0 0 0 By MS/MS 10 0 1 1 74.384 74.723 2 0.018548 85690 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.238 21.007 8779300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8779300 32087 320 29292 269744 214116 214116 1 LQPGVGTSGR Unmodified 970.51959 0.51959303 3224 Q8IVB5 LIX1L LIX1-like protein yes yes 0 0 0 By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 18.875 19.1 2 0.022591 18003 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 46.001 0.28352 90156000 0 0 0 10124000 0 0 9254800 8020000 6286400 12268000 10770000 0 10451000 8804400 14178000 32088 3224 29293 269745;269746;269747;269748;269749;269750;269751;269752;269753 214117;214118 214117 2 LQPHPQLSPEIR Unmodified 1413.7728 0.7728476 2354 Q13895 BYSL Bystin yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 48.457 48.616 3 0.0055097 53598 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.659 39.465 150350000 0 0 0 7601200 9324200 16703000 8735400 8868800 7620500 0 16914000 23996000 13559000 15192000 21831000 32089 2354 29294 269754;269755;269756;269757;269758;269759;269760;269761;269762;269763;269764 214119;214120;214121 214119 3 LQPHPQLSPEIRR Unmodified 1569.874 0.87395863 2354 Q13895 BYSL Bystin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 2 2 2 1 2 2 2 2 2 2 1 40.643 40.828 3;4 0.00085256 45514 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 44.511 39.394 257110000 0 0 0 9838100 9300600 26630000 16185000 11552000 14657000 25315000 26011000 41095000 22652000 23149000 30728000 32090 2354 29295 269765;269766;269767;269768;269769;269770;269771;269772;269773;269774;269775;269776;269777;269778;269779;269780;269781;269782;269783;269784;269785 214122;214123;214124;214125;214126;214127;214128;214129;214130;214131 214122 9 LQPLYETLK Unmodified 1103.6227 0.62266112 2086 Q03001 DST Dystonin yes yes 0 0 0 By MS/MS 2 0 1 1 74.171 69.016 2 0.0073625 86704 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.43 67.88 16709000 0 16709000 0 0 0 0 0 0 0 0 0 0 0 0 0 32091 2086 29296 269786 214132 214132 1 LQPPPLGR Unmodified 876.51814 0.51813647 1628 P50548 ERF ETS domain-containing transcription factor ERF yes yes 0 0 0 By MS/MS 10 0 1 1 44.356 44.81 2 0.041266 50081 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 50.025 12.996 8049800 0 0 0 0 0 0 0 0 0 0 8049800 0 0 0 0 32092 1628 29297 269787 214133 214133 1 LQPQEISPPPTANLDR Unmodified 1774.9214 0.92136233 2114 Q05397 PTK2 Focal adhesion kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.386 65.474 2 0.00044125 74338 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.727 41.194 69524000 0 0 0 2714100 2524200 5064800 5894300 4335400 3442400 7260900 7293700 9441500 6140500 5533400 9879300 32093 2114 29298 269788;269789;269790;269791;269792;269793;269794;269795;269796;269797;269798;269799 214134;214135;214136;214137;214138;214139;214140 214135 4 LQPQEISPPPTANLDRSNDK Unmodified 2219.1182 0.11822424 2114 Q05397 PTK2 Focal adhesion kinase 1 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 62.743 57.398 3 1.8616E-08 73724 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 55.206 41.048 39428000 0 39428000 0 0 0 0 0 0 0 0 0 0 0 0 0 32094 2114 29299 269800;269801 214141 214141 1 LQPQITMIPPSAQPPR Unmodified 1772.9607 0.96072473 1974 P78344 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 77.419 77.476 2;3 0.00059192 88462 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 71.176 65.204 406590000 0 0 0 19123000 24090000 27256000 23893000 37615000 19836000 34505000 44096000 47613000 25374000 39681000 63511000 32095 1974 29300 269802;269803;269804;269805;269806;269807;269808;269809;269810;269811;269812;269813;269814;269815;269816;269817;269818;269819;269820;269821;269822;269823;269824;269825 214142;214143;214144;214145;214146;214147;214148;214149;214150;214151;214152;214153;214154;214155;214156;214157;214158;214159;214160;214161;214162;214163;214164;214165;214166;214167;214168 214160 15 LQPQITMIPPSAQPPR Oxidation (M) 1788.9556 0.95563935 1974 P78344 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 2 3 2 1 1 1 68.476 68.639 2 1.4362E-05 79566 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 76.655 67.701 112110000 0 0 0 0 6974800 0 10268000 9255400 11126000 22767000 0 27355000 6778800 9768600 7811200 32096 1974 29300 269826;269827;269828;269829;269830;269831;269832;269833;269834;269835;269836;269837;269838;269839 214169;214170;214171;214172;214173;214174;214175;214176;214177;214178;214179;214180;214181;214182;214183 214169 3171 13 LQPQITMIPPSAQPPRTQTPPLGQTPQLGLK Unmodified 3332.8279 0.82786665 1974 P78344 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 0 0 1 By MS/MS 10 0 1 1 85.33 85.498 3 0.0038765 98793 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 21.169 15.389 5395800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5395800 32097 1974 29301 269840 214184 214184 1 LQPSFEALK Unmodified 1031.5651 0.56514624 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 61.367 61.591 2 0.045396 69362 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 43.218 9.8597 17608000 0 0 0 0 0 3159300 0 0 1822200 0 0 0 4556700 3150200 4920100 32098 5049 29302 269841;269842;269843;269844;269845 214185 214185 1 LQPSSSPENSLDPFPPR Unmodified 1866.9112 0.91119158 3576 Q8WWM7 ATXN2L Ataxin-2-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 2 1 1 1 2 1 1 1 1 74.359 74.462 2 0.00015886 85389 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 64.878 50.72 97068000 0 0 0 5175900 0 5296900 7337600 9228100 4481200 10967000 5491500 11892000 13094000 8969000 15135000 32099 3576 29303 269846;269847;269848;269849;269850;269851;269852;269853;269854;269855;269856;269857;269858 214186;214187;214188;214189;214190;214191;214192;214193;214194;214195;214196;214197 214188 12 LQPSSSPENSLDPFPPRILK Unmodified 2221.1743 0.17428256 3576 Q8WWM7 ATXN2L Ataxin-2-like protein yes yes 0 0 1 By MS/MS 2 0 1 1 87.433 79.302 3 0.00036303 103838 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 44.382 26.087 14724000 14724000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32100 3576 29304 269859 214198;214199;214200 214200 3 LQPSSTSESMDQLLNK Unmodified 1776.8564 0.85637882 4047 Q99700 ATXN2 Ataxin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.351 68.429 2 3.2996E-07 78655 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 135.6 121.94 112500000 0 0 0 5372200 6184200 6628600 6764300 7437800 6734500 10788000 11994000 12184000 8919300 10537000 18955000 32101 4047 29305 269860;269861;269862;269863;269864;269865;269866;269867;269868;269869;269870;269871 214201;214202;214203;214204;214205;214206 214203 2 LQPTPPIPAPAPK Unmodified 1325.7707 0.77072234 165 O00512 BCL9 B-cell CLL/lymphoma 9 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 63.956 64.045 2 0.0034381 73234 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 53.751 45.526 60636000 0 0 0 4097500 3098700 0 5033300 3503000 0 7991100 6866800 5507700 0 9752900 14786000 32102 165 29306 269872;269873;269874;269875;269876;269877;269878;269879;269880 214207;214208;214209;214210;214211;214212;214213;214214 214211 8 LQQAAQQHIQQQLLAK Unmodified 1845.0221 0.022079431 4968 Q9UKJ3 GPATCH8 G patch domain-containing protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 49.707 50.142 3 0.00043724 55605 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.705 49.509 106770000 0 0 0 0 0 0 0 0 0 32199000 29189000 0 0 0 45382000 32103 4968 29307 269881;269882;269883 214215;214216;214217 214216 3 LQQALAEQQQQNNTSGK Unmodified 1884.929 0.92896691 5158 Q9Y3C7 MED31 Mediator of RNA polymerase II transcription subunit 31 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 24.109 24.366 2 2.2555E-37 24807 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 163.51 154.32 41866000 0 0 0 3601000 3144900 0 0 3842500 2930500 0 5593000 6655800 5279800 4259200 6559600 32104 5158 29308 269884;269885;269886;269887;269888;269889;269890;269891;269892;269893 214218;214219;214220;214221;214222;214223;214224;214225 214219 8 LQQALSDAENEIMR Unmodified 1616.7828 0.78281994 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 72.732 72.818 2 3.9168E-12 83906 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 125.74 97.013 57216000 0 0 0 0 6772000 6820900 4296900 10782000 7009500 0 11843000 9692400 0 0 0 32105 2556 29309 269894;269895;269896;269897;269898;269899;269900 214226;214227;214228;214229;214230;214231;214232 214230 6 LQQALSDAENEIMR Oxidation (M) 1632.7777 0.77773456 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.204 60.309 2 9.0909E-14 68707 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 111.63 73.327 218130000 0 0 0 10255000 12824000 13439000 21012000 13988000 18052000 18205000 19859000 28455000 23116000 14829000 24099000 32106 2556 29309 269901;269902;269903;269904;269905;269906;269907;269908;269909;269910;269911;269912 214233;214234;214235;214236;214237;214238;214239;214240;214241;214242 214240 4200 10 LQQAPNQPK Unmodified 1022.5509 0.55089316 3105 Q7Z589 EMSY Protein EMSY yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.073 12.221 2 0.0088535 11410 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 68.422 30.183 25653000 0 0 0 1484400 1697200 2564300 1861100 1760500 1592800 2742300 1692700 2778000 2217300 2067800 3195000 32107 3105 29310 269913;269914;269915;269916;269917;269918;269919;269920;269921;269922;269923;269924 214243;214244;214245;214246;214247;214248;214249;214250 214243 8 LQQAPQVEAK Unmodified 1110.6033 0.60332266 3298 Q8IZW8 TNS4 Tensin-4 yes yes 0 0 0 By matching By MS/MS By matching By matching By matching 10 0 5 1 1 1 1 1 24.768 24.969 2 0.012563 26747 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 52.255 13.293 16179000 0 0 0 0 0 3448700 3924900 0 0 2458600 2115100 0 4231600 0 0 32108 3298 29311 269925;269926;269927;269928;269929 214251 214251 1 LQQAQEMLK Unmodified 1087.5696 0.56957969 1409 P40222 TXLNA Alpha-taxilin yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38.181 36.633 2 0.0030909 39241 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 127.56 81.139 341510000 7574700 253270000 0 8029100 0 8042000 0 0 0 0 15274000 0 0 16735000 32586000 32109 1409 29312 269930;269931;269932;269933;269934;269935;269936;269937;269938;269939;269940;269941;269942;269943 214252;214253;214254;214255;214256;214257;214258;214259;214260;214261;214262;214263;214264 214256 12 LQQAQEMLK Oxidation (M) 1103.5645 0.56449431 1409 P40222 TXLNA Alpha-taxilin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 21.993 19.2 2 0.0050367 20447 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 71.877 35.308 145070000 9047100 122570000 0 0 0 0 0 0 0 0 0 13452000 0 0 0 32110 1409 29312 269944;269945;269946 214265;214266;214267 214267 2207 3 LQQAQLMR Unmodified 986.53313 0.5331346 3662 Q92793 CREBBP CREB-binding protein yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 34.172 34.303 2 0.0048543 37708 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 114.02 10.737 29417000 0 0 0 0 4489500 0 0 4256100 4088000 6064000 5297600 0 0 5221400 0 32111 3662 29313 269947;269948;269949;269950;269951;269952;269953;269954 214268;214269;214270;214271;214272 214270 5 LQQAQLMR Oxidation (M) 1002.528 0.52804923 3662 Q92793 CREBBP CREB-binding protein yes yes 0 1 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching 10 0 7 1 1 1 1 1 1 1 21.346 21.56 2 0.025566 22632 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 50.898 7.0835 68717000 0 0 0 11054000 6550000 0 11849000 0 0 10406000 11645000 9684100 0 0 7528400 32112 3662 29313 269955;269956;269957;269958;269959;269960;269961 214273 214273 1 LQQAQMLR Unmodified 986.53313 0.5331346 2171 Q09472 EP300 Histone acetyltransferase p300 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 34.029 34.281 2 0.0068464 37922 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 94.163 3.1776 32799000 0 0 0 4267300 0 3768000 0 0 0 6064000 0 5724000 5274000 0 7701700 32113 2171 29314 269962;269963;269964;269965;269966;269967 214274;214275;214276;214277;214278;214279 214274 6 LQQDVMEMK Unmodified 1120.5257 0.52566596 3101 Q7Z4S6 KIF21A Kinesin-like protein KIF21A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 8 3.46 1 3 1 1 1 1 44.384 42.797 2 0.0021179 55088 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.89 97.369 68111000 0 57983000 0 0 0 0 0 0 0 0 5442900 0 4685700 0 0 32114 3101 29315 269968;269969;269970;269971 214280;214281;214282 214281 3 LQQDVMEMK Oxidation (M) 1136.5206 0.52058059 3101 Q7Z4S6 KIF21A Kinesin-like protein KIF21A yes yes 0 1 0 By MS/MS 2 0 1 1 29.758 25.365 2 0.029652 33264 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.265 24.243 10898000 0 10898000 0 0 0 0 0 0 0 0 0 0 0 0 0 32115 3101 29315 269972 214283 214283 1 LQQEELNK Unmodified 1000.5189 0.51892433 3489 Q8TCG1 KIAA1524 Protein CIP2A yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 2 1 1 1 1 1 1 1 1 1 1 16.328 16.207 2 0.0042848 15870 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 111.65 20.872 107530000 0 46478000 0 0 2918100 5753400 5059500 3545400 4408200 6556600 7084300 7063200 0 6709800 11955000 32116 3489 29316 269973;269974;269975;269976;269977;269978;269979;269980;269981;269982;269983;269984 214284;214285;214286;214287;214288;214289;214290;214291 214290 7 LQQEETQLEQSIQAGR Unmodified 1856.9228 0.9228189 4836 Q9UBC2 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 60.027 60.23 2 2.4019E-28 68701 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 123.31 100.44 47428000 0 0 0 0 2095600 0 4091200 3422600 0 0 7401000 7656900 5247400 6120800 11392000 32117 4836 29317 269985;269986;269987;269988;269989;269990;269991;269992;269993 214292;214293;214294;214295;214296 214292 5 LQQEEVQK Unmodified 1000.5189 0.51892433 3151 Q86UP2 KTN1 Kinectin yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 10.716 10.95 2 0.011082 8825 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.741 19.136 3013000 0 0 0 0 0 0 0 0 495050 844310 0 0 0 0 1673600 32118 3151 29318 269994;269995;269996 214297 214297 1 LQQEFYEEK Unmodified 1212.5663 0.56626845 165 O00512 BCL9 B-cell CLL/lymphoma 9 protein yes yes 0 0 0 By MS/MS 2 0 1 1 43.075 37.927 2 0.032606 49290 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.318 65.092 38513000 0 38513000 0 0 0 0 0 0 0 0 0 0 0 0 0 32119 165 29319 269997 214298 214298 1 LQQELANIGQK Unmodified 1240.6776 0.67755023 4077 Q99996 AKAP9 A-kinase anchor protein 9 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 49.362 43.714 2 0.0013852 49196 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 99.139 66.724 26051000 0 26051000 0 0 0 0 0 0 0 0 0 0 0 0 0 32120 4077 29320 269998;269999 214299;214300;214301 214301 3 LQQELEFLEVQEEYIK Unmodified 2037.0306 0.030638012 1482 P43686 PSMC4 26S protease regulatory subunit 6B yes yes 0 0 0 By MS/MS 2 0 1 1 95.025 86.895 3 4.7651E-11 112489 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 109.07 103.53 44246000 44246000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32121 1482 29321 270000 214302;214303 214303 2 LQQELEFLEVQEEYIKDEQK Unmodified 2537.2537 0.25371467 1482 P43686 PSMC4 26S protease regulatory subunit 6B yes yes 0 0 1 By MS/MS 2 0 1 1 92.646 84.516 3 9.9944E-05 109534 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.171 51.196 47488000 47488000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32122 1482 29322 270001 214304 214304 1 LQQELGGR Unmodified 899.48248 0.48247924 3998 Q96T51 RUFY1 RUN and FYVE domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 17.609 17.799 2 0.0045114 17980 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 112.59 22.69 115530000 0 0 0 0 6512700 12022000 8367400 0 8442600 13253000 0 19789000 14779000 13021000 19345000 32123 3998 29323 270002;270003;270004;270005;270006;270007;270008;270009;270010;270011;270012 214305;214306;214307;214308;214309;214310;214311;214312;214313;214314;214315 214306 10 LQQELLLDAEK Unmodified 1298.7082 0.70818166 5310 no no 0 0 0 By MS/MS By matching By matching By matching 10 0 5 2 1 1 1 51.123 51.258 2 0.016762 58067 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 44.203 7.0119 + 50755000 0 0 0 0 0 18294000 0 10749000 0 9414800 0 0 0 12298000 0 32124 5310 29324 270013;270014;270015;270016;270017 214316 214316 1 LQQENLQIFTQLQK Unmodified 1729.9363 0.93628412 3496 Q8TD19 NEK9 Serine/threonine-protein kinase Nek9 yes yes 0 0 0 By MS/MS 2 0 1 1 86.625 81.817 2 2.3572E-29 101747 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.09 108.66 26567000 0 26567000 0 0 0 0 0 0 0 0 0 0 0 0 0 32125 3496 29325 270018 214317 214317 1 LQQENSILR Unmodified 1099.5986 0.59857163 4817 Q9P2E9 RRBP1 Ribosome-binding protein 1 no no 0 0 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 37.269 37.384 2 0.013227 39927 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.118 12.27 24141000 0 0 0 1917700 2136100 0 1935600 2673900 0 3354600 3121000 0 0 2934800 6067400 32126 4817 29326 270019;270020;270021;270022;270023;270024;270025;270026;270027 214318;214319;214320 214318 3 LQQESTFLFHGNK Unmodified 1547.7732 0.77324153 4978 Q9UKX7 NUP50 Nuclear pore complex protein Nup50 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 2 20 1 1 2 1 1 2 2 2 2 2 1 1 2 2 56.861 56.291 2;3 2.7544E-07 78687 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.697 81.148 517240000 143860000 29682000 0 22240000 12737000 24817000 22809000 30104000 21696000 35142000 34411000 36980000 25085000 25391000 52289000 32127 4978 29327 270028;270029;270030;270031;270032;270033;270034;270035;270036;270037;270038;270039;270040;270041;270042;270043;270044;270045;270046;270047;270048;270049 214321;214322;214323;214324;214325;214326;214327;214328;214329;214330;214331;214332;214333;214334;214335;214336;214337;214338;214339;214340 214330 17 LQQEVEEQLK Unmodified 1242.6456 0.6455814 4413 Q9H6D7 HAUS4 HAUS augmin-like complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.367 38.546 2 0.0018002 42662 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 101.64 61.642 74955000 0 0 0 3057700 3903000 8289800 4615600 5357200 3424900 7210300 8781800 10243000 5531700 4965300 9574500 32128 4413 29328 270050;270051;270052;270053;270054;270055;270056;270057;270058;270059;270060;270061 214341;214342;214343;214344;214345;214346;214347;214348;214349;214350;214351 214348 11 LQQFFNER Unmodified 1080.5352 0.53524309 5014 Q9UM54 MYO6 Unconventional myosin-VI yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 51.703 51.913 2 0.0068017 58677 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 96.253 20.942 102580000 0 0 0 6331800 0 9673200 6952300 8059800 5141900 9894000 10760000 18959000 10905000 6720300 9177400 32129 5014 29329 270062;270063;270064;270065;270066;270067;270068;270069;270070;270071;270072 214352;214353;214354;214355;214356;214357;214358;214359;214360 214353 8 LQQFMENK Oxidation (M) 1052.4961 0.4960804 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 1 0 By MS/MS 2 0 1 1 23.894 19.766 2 0.038651 26167 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.787 33.154 32656000 0 32656000 0 0 0 0 0 0 0 0 0 0 0 0 0 32130 5049 29330 270073 214361 214361 1 LQQGIPPSGPAGELK Unmodified 1490.8093 0.80929269 1992 P80303 NUCB2 Nucleobindin-2;Nesfatin-1 yes yes 0 0 0 By MS/MS 2 0 1 1 61.158 55.283 2 0.00015397 71488 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.02 82.718 29494000 0 29494000 0 0 0 0 0 0 0 0 0 0 0 0 0 32131 1992 29331 270074 214362 214362 1 LQQHVDK Unmodified 866.46102 0.46101552 4621 Q9NS87 KIF15 Kinesin-like protein KIF15 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 5.8239 2.515 2 0.040838 4604 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.229 19.871 50353000 11423000 38930000 0 0 0 0 0 0 0 0 0 0 0 0 0 32132 4621 29332 270075;270076 214363 214363 1 LQQLEEQTR Unmodified 1143.5884 0.58840088 4581 Q9NQY0 BIN3 Bridging integrator 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.009 24.214 2 0.015491 25347 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 66.299 13.513 45884000 0 0 0 3400400 3013900 3374100 3711700 3778100 2238000 4701200 4099500 3788200 3915500 3164300 6698600 32133 4581 29333 270077;270078;270079;270080;270081;270082;270083;270084;270085;270086;270087;270088 214364;214365 214365 2 LQQLEEQTRR Unmodified 1299.6895 0.6895119 4581 Q9NQY0 BIN3 Bridging integrator 3 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 19.698 19.925 3 0.00080412 20364 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 73.067 35.641 45134000 0 0 0 6440900 0 0 8310700 7148900 0 0 9152300 14081000 0 0 0 32134 4581 29334 270089;270090;270091;270092;270093 214366;214367;214368 214367 2 LQQLPADFGR Unmodified 1143.6037 0.60365701 3738 Q96AG4 LRRC59 Leucine-rich repeat-containing protein 59 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 59.734 59.915 2 0.0082907 68229 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 73.248 12.488 119520000 0 0 0 0 7853300 10982000 9931400 0 6639500 11746000 14656000 17268000 11911000 12233000 16295000 32135 3738 29335 270094;270095;270096;270097;270098;270099;270100;270101;270102;270103 214369;214370;214371;214372 214369 4 LQQLQMEK Unmodified 1016.5325 0.5324659 1516 P46937 YAP1 Transcriptional coactivator YAP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 6.25 3.77 1 1 2 2 1 1 36.27 34.127 2 0.030601 44272 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.761 0 151130000 0 89544000 0 0 0 0 0 0 0 0 0 0 0 20223000 41359000 32136 1516 29336 270104;270105;270106;270107 214373;214374;214375 214373 2 LQQLQNQIR Unmodified 1139.6411 0.64110515 3581 Q8WX93 PALLD Palladin yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.47 36.652 2 6.6924E-06 40396 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 160.03 94.989 463650000 0 0 0 28100000 26157000 36738000 30710000 27793000 25621000 37718000 37131000 51331000 47167000 44864000 70319000 32137 3581 29337 270108;270109;270110;270111;270112;270113;270114;270115;270116;270117;270118;270119 214376;214377;214378;214379;214380;214381;214382 214377 1 LQQLQNQIRLEQEAGAR Unmodified 1994.0657 0.06573516 3581 Q8WX93 PALLD Palladin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 58.068 58.388 3 0.00052456 65714 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.844 26.372 43043000 0 0 0 0 0 0 0 4447300 5409100 8461100 7841500 5556600 3746700 0 7580900 32138 3581 29338 270120;270121;270122;270123;270124;270125;270126 214383;214384;214385;214386 214384 4 LQQLVTENPGK Unmodified 1225.6667 0.6666512 3278 Q8IYB1 MB21D2 Protein MB21D2 yes yes 0 0 0 By MS/MS 2 0 1 1 42.632 37.484 2 1.3595E-05 48717 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.67 98.883 35955000 0 35955000 0 0 0 0 0 0 0 0 0 0 0 0 0 32139 3278 29339 270127 214387 214387 1 LQQMEELK Oxidation (M) 1033.5114 0.51139611 5386 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 25.691 26.095 2 0.0073007 28009 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 77.741 15.276 + 1146200000 0 0 0 170650000 0 0 0 0 0 0 280180000 392400000 0 0 302970000 32140 5386 29340 270128;270129;270130;270131 214388;214389;214390;214391 214390 6762 4 LQQMQAESGFVQHVGFK Unmodified 1932.9516 0.9516166 3283 Q8IYH5 ZZZ3 ZZ-type zinc finger-containing protein 3 yes yes 0 0 0 By MS/MS 2 0 1 1 78.271 70.141 3 0.0065782 92276 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 25.236 15.137 12181000 12181000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32141 3283 29341 270132 214392 214392 1 LQQNQSWTVK Unmodified 1230.6357 0.63568542 3019 Q6ZVX7 NCCRP1 F-box only protein 50 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.81 36.991 2 0.00090231 40750 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 116.05 71.358 258280000 0 0 0 86791000 10314000 14059000 10623000 35702000 6046400 19810000 14982000 15489000 28253000 5426900 10782000 32142 3019 29342 270133;270134;270135;270136;270137;270138;270139;270140;270141;270142;270143;270144 214393;214394;214395;214396;214397;214398;214399;214400;214401;214402;214403 214399 9 LQQPEAAAGVLEYAMK Unmodified 1717.8709 0.87090667 1454 P42345 MTOR Serine/threonine-protein kinase mTOR yes yes 0 0 0 By MS/MS 2 0 1 1 88.395 83.553 3 0.00015707 103739 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 55.589 45.532 15807000 0 15807000 0 0 0 0 0 0 0 0 0 0 0 0 0 32143 1454 29343 270145 214404;214405 214405 2 LQQQAALSPTTAPAVSSVSK Unmodified 1983.0637 0.063669474 3594 Q8WXI9 GATAD2B Transcriptional repressor p66-beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 2 2 2 1 2 2 1 60.046 60.111 2;3 1.0966E-27 68532 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 129.38 115.97 446450000 0 0 0 26635000 29815000 32086000 38169000 27328000 27704000 47868000 54526000 30559000 47291000 38318000 46156000 32144 3594 29344 270146;270147;270148;270149;270150;270151;270152;270153;270154;270155;270156;270157;270158;270159;270160;270161;270162;270163;270164;270165;270166;270167 214406;214407;214408;214409;214410;214411;214412;214413;214414 214407 9 LQQQELR Unmodified 913.49813 0.49812931 116 O00139 KIF2A Kinesin-like protein KIF2A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 16.021 16.169 2 0.020538 15249 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 108.24 16.654 73606000 0 0 0 3484100 3648300 5246400 4155500 4651300 0 6479400 10707000 14135000 11116000 9982800 0 32145 116 29345 270168;270169;270170;270171;270172;270173;270174;270175;270176;270177 214415;214416;214417;214418;214419;214420;214421;214422 214419 8 LQQQEQREEAQWTPTK Unmodified 1998.9759 0.9759171 2759 Q5SW79 CEP170 Centrosomal protein of 170 kDa yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 36.461 36.355 3 4.5712E-06 39574 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 79.022 34.728 144030000 0 0 6696500 8006700 9431500 13964000 8309900 11745000 6883800 10843000 11823000 15518000 12845000 10611000 17352000 32146 2759 29346 270178;270179;270180;270181;270182;270183;270184;270185;270186;270187;270188;270189;270190 214423;214424;214425;214426;214427;214428;214429;214430;214431;214432;214433;214434;214435 214434 13 LQQQFNSHVFK Unmodified 1374.7044 0.70443369 5006 Q9ULV0 MYO5B Unconventional myosin-Vb yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 44.442 44.886 3 0.041563 50420 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 23.514 19.724 26779000 0 0 0 0 0 0 0 0 0 0 0 0 11766000 8642700 6370100 32147 5006 29347 270191;270192;270193 214436 214436 1 LQQQIVTIENAEK Unmodified 1512.8148 0.814772 5224 Q9Y592 CEP83 Centrosomal protein of 83 kDa yes yes 0 0 0 By MS/MS 2 0 1 1 63.468 57.56 2 3.6991E-13 73870 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 133.81 38.306 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32148 5224 29348 270194 214437 214437 1 LQQQLEK Unmodified 885.49198 0.4919813 1791 P57081 WDR4 tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.13 14.293 2 0.02336 13625 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 89.369 5.9923 102250000 0 0 0 4956100 5656900 7333400 4994900 4356100 3979900 9137600 12673000 8266800 13389000 12984000 14522000 32149 1791 29349 270195;270196;270197;270198;270199;270200;270201;270202;270203;270204;270205;270206 214438;214439;214440;214441;214442;214443;214444;214445;214446 214439 7 LQQQLQDIK Unmodified 1112.619 0.61897272 3211 Q86YT6 MIB1 E3 ubiquitin-protein ligase MIB1 yes yes 0 0 0 By MS/MS 2 0 1 1 41.32 36.224 2 0.0031178 47110 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.25 62.475 29223000 0 29223000 0 0 0 0 0 0 0 0 0 0 0 0 0 32150 3211 29350 270207 214447 214447 1 LQQQLTQAAQELAAEK Unmodified 1768.9319 0.93192702 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 4 1 1 2 2 2 1 2 2 76.529 75.452 2;3 0 93064 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 329.67 257.06 583010000 0 488060000 1957100 1573800 3159600 0 5231200 0 0 0 13358000 12007000 0 25531000 32137000 32151 2495 29351 270208;270209;270210;270211;270212;270213;270214;270215;270216;270217;270218;270219;270220;270221;270222;270223;270224 214448;214449;214450;214451;214452;214453;214454;214455;214456 214448 8 LQQQLWSK Unmodified 1029.5607 0.56072956 3347 Q8N5I4 DHRSX Dehydrogenase/reductase SDR family member on chromosome X yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.047 43.222 2 0.0066594 49324 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 98.997 61.351 152680000 0 0 0 10482000 9820200 9045700 12119000 14562000 10803000 13301000 19071000 17875000 14906000 10264000 10430000 32152 3347 29352 270225;270226;270227;270228;270229;270230;270231;270232;270233;270234;270235;270236 214457;214458;214459;214460;214461 214461 5 LQQQMDLQK Unmodified 1130.5754 0.57539335 189 O14578 CIT Citron Rho-interacting kinase yes yes 0 0 0 By MS/MS 2 0 1 1 33.656 29.012 2 0.033997 38003 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.251 40.825 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32153 189 29353 270237 214462 214462 1 LQQQPGCTAEETLEALILK Unmodified 2141.1038 0.10381973 217 O14802 POLR3A DNA-directed RNA polymerase III subunit RPC1 yes yes 0 0 0 By MS/MS 2 0 1 1 99.046 94.312 3 0.011686 116695 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 30.863 23.176 11539000 0 11539000 0 0 0 0 0 0 0 0 0 0 0 0 0 32154 217 29354 270238 214463 214463 1 LQQQQAQQPLQQQQQR Unmodified 1977.014 0.01403394 4668 Q9NVH2 INTS7 Integrator complex subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.594 26.795 3 8.712E-08 28289 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 87.727 77.134 104860000 0 0 0 5578300 7558100 9844900 7130000 8139000 4961900 10237000 8484100 16605000 7941500 7323100 11053000 32155 4668 29355 270239;270240;270241;270242;270243;270244;270245;270246;270247;270248;270249;270250 214464;214465;214466;214467;214468;214469;214470;214471;214472;214473;214474;214475 214473 12 LQQQQQQQQLAQMK Unmodified 1726.8785 0.87845166 2994 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.454 34.637 2 1.9947E-100 37580 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 254.83 240.71 143920000 0 0 0 5514200 4641700 9209400 6925600 8206000 6574400 10714000 29446000 14371000 11558000 9047200 27715000 32156 2994 29356 270251;270252;270253;270254;270255;270256;270257;270258;270259;270260;270261;270262 214476;214477;214478;214479;214480;214481;214482;214483;214484;214485;214486;214487 214481 12 LQQQQQQQQLAQMK Oxidation (M) 1742.8734 0.87336628 2994 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 20.658 20.974 3 0.00010987 21761 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 73.082 62.038 47362000 0 0 0 0 0 0 9116500 0 6157900 7307800 0 13746000 0 5780700 5253100 32157 2994 29356 270263;270264;270265;270266;270267;270268;270269 214488;214489;214490;214491;214492;214493 214489 4609 6 LQQQQRPEDAEDGAEGGGK Unmodified 2011.9195 0.91952443 2168 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 1 2 2 1 1 2 3 3 2 3 2 14.98 15.212 2;3 6.713E-65 14938 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 160.55 111.07 836950000 0 0 0 45347000 39049000 51794000 60589000 21311000 35203000 59621000 96945000 114260000 97424000 96081000 119330000 32158 2168 29357 270270;270271;270272;270273;270274;270275;270276;270277;270278;270279;270280;270281;270282;270283;270284;270285;270286;270287;270288;270289;270290;270291;270292;270293 214494;214495;214496;214497;214498;214499;214500;214501;214502;214503;214504;214505;214506;214507 214503 13 LQQQRECLNK Unmodified 1315.6667 0.66666797 2333 Q13625 TP53BP2 Apoptosis-stimulating of p53 protein 2 yes yes 0 0 1 By MS/MS By matching By MS/MS 2 0 4 2 1 1 14.019 10.596 2;3 0.0047957 15751 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.5 47.692 94443000 87039000 5663200 1741100 0 0 0 0 0 0 0 0 0 0 0 0 32159 2333 29358 270294;270295;270296;270297 214508;214509 214508 1 LQQQVEEK Unmodified 1000.5189 0.51892433 5372 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 16.393 16.48 2 0.0092881 16125 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 83.377 0 + 18361000 0 0 0 3850900 0 0 0 3545400 4408200 6556600 0 0 0 0 0 32160 5372 29359 270298;270299;270300;270301 214510;214511;214512;214513 214511 4 LQQQVEEKR Unmodified 1156.62 0.62003536 5372 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching 10 0 9 2 1 1 1 2 1 1 15.589 15.742 3 0.017321 15693 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 32.999 2.3865 + 40005000 0 0 0 0 3028000 3506600 2292500 0 1959800 0 0 17309000 0 3471700 8437800 32161 5372 29360 270302;270303;270304;270305;270306;270307;270308;270309;270310 214514;214515;214516;214517 214516 2 LQQSHPLSATQIQVK Unmodified 1676.921 0.9209684 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 46.712 46.953 3 0.041815 51571 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 26.292 18.177 58148000 0 0 0 0 5010800 6911900 5541800 5367300 0 0 12632000 9883400 0 0 12801000 32162 2344 29361 270311;270312;270313;270314;270315;270316;270317 214518 214518 1 LQQSSYHK Unmodified 989.49304 0.49304393 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.56 3.86 3 1 5 1 2 1 1 1 1 1 1 6.4121 5.0684 2 0.010563 5904 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 112.17 72.629 1004300000 538140000 315910000 142130000 0 1089200 2322800 2042200 1116100 1501100 0 0 0 0 0 0 32163 643 29362 270318;270319;270320;270321;270322;270323;270324;270325;270326 214519;214520;214521;214522;214523 214523 4 LQQTAFENAYLK Unmodified 1424.73 0.72997974 2269 Q13315 ATM Serine-protein kinase ATM yes yes 0 0 0 By MS/MS 2 0 1 1 72.945 67.4 2 1.0864E-09 85226 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.63 101.54 73666000 0 73666000 0 0 0 0 0 0 0 0 0 0 0 0 0 32164 2269 29363 270327 214524 214524 1 LQQTEAELRK Unmodified 1214.6619 0.66190017 1210 P26640 VARS Valine--tRNA ligase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 6 2 24 2 4 2 2 2 2 2 2 2 2 2 2 2 2 2 19.204 18.365 2;3 0.0016301 23600 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 127.68 76.976 3775000000 290800000 1362400000 1290500000 42072000 41254000 103370000 39694000 47410000 30657000 93724000 58279000 93963000 49460000 66754000 164660000 32165 1210 29364 270328;270329;270330;270331;270332;270333;270334;270335;270336;270337;270338;270339;270340;270341;270342;270343;270344;270345;270346;270347;270348;270349;270350;270351;270352;270353;270354;270355;270356;270357;270358;270359 214525;214526;214527;214528;214529;214530;214531;214532;214533;214534;214535;214536;214537;214538;214539;214540;214541;214542;214543;214544 214538 10 LQQTQSLHSLR Unmodified 1309.7102 0.71024735 138 O00273 DFFA DNA fragmentation factor subunit alpha yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 2 1 1 2 1 29.469 29.815 2;3 0.011186 31269 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 45.915 35.864 117390000 0 0 0 0 0 0 5772000 3539100 4783100 7343800 18376000 14937000 9318600 21006000 32315000 32166 138 29365 270360;270361;270362;270363;270364;270365;270366;270367;270368;270369;270370 214545;214546 214546 1 LQQTTQLIK Unmodified 1071.6288 0.62880913 4652 Q9NUQ3 TXLNG Gamma-taxilin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 4 2 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 40.541 38.936 2 0.0029321 43117 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 125.31 54.79 841950000 19326000 641400000 4656500 8532800 9689600 9892000 9759400 7469800 9609800 15152000 27779000 19265000 13013000 13120000 33282000 32167 4652 29366 270371;270372;270373;270374;270375;270376;270377;270378;270379;270380;270381;270382;270383;270384;270385;270386;270387;270388 214547;214548;214549;214550;214551;214552;214553;214554;214555;214556;214557;214558;214559;214560 214554 11 LQQTYAALNSK Unmodified 1235.651 0.65100113 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 37.809 36.693 2 1.5559E-13 46419 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 159.79 124.98 4294100000 87100000 1465900000 11852000 253970000 174290000 261290000 185890000 157780000 147650000 317190000 211540000 248880000 215420000 135970000 419470000 32168 1518 29367 270389;270390;270391;270392;270393;270394;270395;270396;270397;270398;270399;270400;270401;270402;270403;270404 214561;214562;214563;214564;214565;214566;214567;214568;214569;214570;214571;214572;214573;214574 214563 12 LQQVAEK Unmodified 814.45487 0.45486751 2599 Q16222 UAP1 UDP-N-acetylhexosamine pyrophosphorylase;UDP-N-acetylgalactosamine pyrophosphorylase;UDP-N-acetylglucosamine pyrophosphorylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 11.172 8.014 2 0.029967 10973 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.006 9.6478 305800000 26807000 277560000 1428200 0 0 0 0 0 0 0 0 0 0 0 0 32169 2599 29368 270405;270406;270407 214575 214575 1 LQQVDGFEK Unmodified 1062.5346 0.53457439 4608 Q9NRN9 METTL5 Methyltransferase-like protein 5 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 37.605 37.729 2 0.0189 41501 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 54.436 25.538 39310000 0 0 0 3149600 0 4679700 3489500 0 2704100 5667300 8148300 0 5520300 5951400 0 32170 4608 29369 270408;270409;270410;270411;270412;270413;270414;270415 214576;214577;214578;214579 214577 2 LQQVDPVLLK Unmodified 1151.6914 0.69140938 472 O75179 ANKRD17 Ankyrin repeat domain-containing protein 17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 2 1 1 1 1 68.128 68.01 2 0.0014968 77878 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 90.709 67.928 87184000 0 0 0 13135000 11574000 14068000 17931000 15664000 14812000 0 0 0 0 0 0 32171 472 29370 270416;270417;270418;270419;270420;270421;270422;270423;270424;270425;270426;270427 214580;214581;214582;214583;214584;214585;214586;214587;214588;214589;214590;214591 214583 12 LQQVLQMESHIQSTSDR Oxidation (M) 2014.9742 0.97420254 2457 Q14974 KPNB1 Importin subunit beta-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 43.545 43.667 3 3.3633E-19 48788 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 102.58 91.762 346460000 0 0 0 19092000 17278000 31959000 24255000 18767000 9073100 36294000 54190000 0 43622000 26097000 65836000 32172 2457 29371 270428;270429;270430;270431;270432;270433;270434;270435;270436;270437;270438 214592;214593;214594;214595;214596;214597;214598;214599;214600;214601;214602;214603;214604 214600 4042 13 LQQVLQMESHIQSTSDR Unmodified 1998.9793 0.97928792 2457 Q14974 KPNB1 Importin subunit beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.057 61.159 3 2.2956E-41 68909 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 150.59 122.5 184740000 0 0 0 6510500 4902500 13916000 5073900 19159000 3670900 20822000 16548000 13887000 12299000 12998000 54951000 32173 2457 29371 270439;270440;270441;270442;270443;270444;270445;270446;270447;270448;270449;270450 214605;214606;214607;214608;214609;214610;214611;214612;214613;214614;214615;214616;214617;214618 214613 13 LQQVMQAK Unmodified 944.51134 0.51133653 3143 Q86U86 PBRM1 Protein polybromo-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 21.912 21.762 2 0.0098263 22762 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 81.635 35.264 8030700 0 0 0 0 3116800 0 4914000 0 0 0 0 0 0 0 0 32174 3143 29372 270451;270452;270453 214619;214620 214619 2 LQQVMQAK Oxidation (M) 960.50625 0.50625115 3143 Q86U86 PBRM1 Protein polybromo-1 yes yes 0 1 0 By MS/MS 2 0 1 1 11.606 8.3277 2 0.041638 11487 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.344 27.241 14976000 0 14976000 0 0 0 0 0 0 0 0 0 0 0 0 0 32175 3143 29372 270454 214621 214621 1 LQQVNGLGQGLIQSAGK Unmodified 1709.9424 0.94243213 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS 10 0 1 1 72.352 72.46 2 0.0076077 83438 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 71.806 59.593 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32176 5049 29373 270455 214622 214622 1 LQQVPELK Unmodified 953.55458 0.55458155 4482 Q9HA65 TBC1D17 TBC1 domain family member 17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.532 45.702 2 0.0060433 51895 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 104.21 70.851 100070000 0 0 0 4473800 5620400 6831600 7083600 7007400 4672300 10340000 13618000 10675000 9282500 7456300 13009000 32177 4482 29374 270456;270457;270458;270459;270460;270461;270462;270463;270464;270465;270466;270467 214623;214624;214625;214626;214627;214628;214629;214630;214631;214632;214633;214634 214634 11 LQQYEEIIQSTEEFENALK Unmodified 2311.122 0.12197221 311 O43264 ZW10 Centromere/kinetochore protein zw10 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 98.206 93.471 3 4.1173E-05 115681 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.088 59.999 36441000 0 36441000 0 0 0 0 0 0 0 0 0 0 0 0 0 32178 311 29375 270468 214635 214635 1 LQQYFPK Unmodified 922.49125 0.49125301 3157 Q86UV5 USP48 Ubiquitin carboxyl-terminal hydrolase 48 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 42.779 43.232 2 0.03046 48417 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 74.717 31.651 20773000 0 0 0 0 0 0 0 0 0 7908800 0 0 0 0 12864000 32179 3157 29376 270469;270470 214636 214636 1 LQRELEDATETADAMNR Unmodified 1961.9113 0.91126793 1356 P35579 MYH9 Myosin-9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.131 55.262 3 3.2838E-36 62886 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 100.58 89.716 528280000 0 0 0 21251000 23585000 35833000 18262000 45868000 24193000 48114000 60888000 69083000 29020000 50010000 102170000 32180 1356 29377 270471;270472;270473;270474;270475;270476;270477;270478;270479;270480;270481;270482 214637;214638;214639;214640;214641;214642;214643;214644;214645;214646;214647;214648;214649;214650;214651;214652;214653 214638 17 LQRELEDATETADAMNR Oxidation (M) 1977.9062 0.90618255 1356 P35579 MYH9 Myosin-9 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 42.019 42.046 3 1.4358E-08 46403 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.378 66.963 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32181 1356 29377 270483;270484;270485;270486;270487 214654;214655;214656;214657;214658 214656 2074 5 LQRELEDATETADAMNREVSSLK Oxidation (M) 2621.2603 0.26027338 1356 P35579 MYH9 Myosin-9 yes yes 0 1 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 5 25 3 2 2 1 2 4 1 3 1 3 2 2 1 3 58.788 57.808 3;4 9.1658E-43 65819 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 107.56 89.733 433930000 53137000 0 44722000 9320800 4436900 24495000 31494000 0 36181000 17674000 60394000 55990000 23607000 8355400 64119000 32182 1356 29378 270488;270489;270490;270491;270492;270493;270494;270495;270496;270497;270498;270499;270500;270501;270502;270503;270504;270505;270506;270507;270508;270509;270510;270511;270512;270513;270514;270515;270516;270517 214659;214660;214661;214662;214663;214664;214665;214666;214667;214668;214669;214670;214671;214672;214673;214674;214675 214675 2074 15 LQRELEDATETADAMNREVSSLK Unmodified 2605.2654 0.26535876 1356 P35579 MYH9 Myosin-9 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 3 2 1 81.852 76.532 3;4 2.2401E-67 97369 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 139.04 104.13 260590000 183660000 69447000 7477700 0 0 0 0 0 0 0 0 0 0 0 0 32183 1356 29378 270518;270519;270520;270521;270522;270523 214676;214677;214678;214679;214680 214678 4 LQREVQEAQVNEEEVK Unmodified 1926.9647 0.96468371 3459 Q8NHQ8 RASSF8 Ras association domain-containing protein 8 yes yes 0 0 1 By MS/MS 2 0 1 1 38.966 35.478 3 0.017402 44701 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 36.597 27.5 6619300 0 0 6619300 0 0 0 0 0 0 0 0 0 0 0 0 32184 3459 29379 270524 214681 214681 1 LQRLEDELNR Unmodified 1284.6786 0.67861287 1029 P15924 DSP Desmoplakin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 39.783 40.199 3 0.0040577 44640 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 66.56 32.694 116930000 0 0 0 0 0 0 0 0 0 40942000 0 0 49467000 0 26523000 32185 1029 29380 270525;270526;270527;270528 214682;214683;214684;214685;214686 214685 5 LQRPLTPGSSDSLTASANYSK Unmodified 2192.1073 0.1073252 566 O75962 TRIO Triple functional domain protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 53.851 54.194 3 7.9048E-06 61214 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 59.469 50.869 46605000 0 0 0 0 0 5765200 0 0 0 11449000 5746800 7280000 4231700 4756800 7375900 32186 566 29381 270529;270530;270531;270532;270533;270534;270535 214687;214688;214689;214690;214691;214692;214693 214688 7 LQRQLDEPK Unmodified 1125.6142 0.6142217 1166 P23588 EIF4B Eukaryotic translation initiation factor 4B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 21.502 17.671 2 0.0054431 25258 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 176.43 142.03 152880000 65870000 41272000 45740000 0 0 0 0 0 0 0 0 0 0 0 0 32187 1166 29382 270536;270537;270538 214694;214695 214694 0 LQRSEQAVAQLEEEK Unmodified 1756.8955 0.89554151 4321;4629 Q9H0B6;Q9NSK0 KLC2;KLC4 Kinesin light chain 2;Kinesin light chain 4 no no 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 49.971 45.147 3 0.0048614 56426 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 53.169 41.254 62607000 0 28187000 34420000 0 0 0 0 0 0 0 0 0 0 0 0 32188 4321;4629 29383 270539;270540 214696;214697 214697 2 LQRSGEVPPQK Unmodified 1237.6779 0.67788459 4651 Q9NUP9 LIN7C Protein lin-7 homolog C yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 1 2 15.974 13.009 3 0.0074066 19167 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.408 38.658 35133000 26773000 0 8360000 0 0 0 0 0 0 0 0 0 0 0 0 32189 4651 29384 270541;270542;270543 214698;214699 214698 2 LQRSVEQEENK Unmodified 1358.679 0.6790068 3151 Q86UP2 KTN1 Kinectin yes yes 0 0 1 By MS/MS 2 0 1 1 11.143 8.8904 3 0.03505 11345 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 42.425 28.695 16735000 0 0 16735000 0 0 0 0 0 0 0 0 0 0 0 0 32190 3151 29385 270544 214700 214700 1 LQSAGSAMPTSSSFK Unmodified 1497.7133 0.71334339 2759 Q5SW79 CEP170 Centrosomal protein of 170 kDa yes yes 0 0 0 By MS/MS 10 0 1 1 47.912 48.148 2 0.014087 53352 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 65.179 33.545 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32191 2759 29386 270545 214701 214701 1 LQSDVLATGPTSNNR Unmodified 1571.7903 0.79034816 3017 Q6ZUT9 DENND5B DENN domain-containing protein 5B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 44.594 44.948 2 3.1473E-10 49303 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 121.02 108.07 64035000 0 0 0 0 0 9875700 0 7056500 5484800 12024000 8572700 12062000 0 0 8959700 32192 3017 29387 270546;270547;270548;270549;270550;270551;270552;270553;270554 214702;214703;214704;214705;214706;214707;214708;214709;214710;214711;214712 214706 11 LQSDVLSTGPASNK Unmodified 1415.7256 0.72562264 2889 Q6IQ26 DENND5A DENN domain-containing protein 5A yes yes 0 0 0 By MS/MS 2 0 1 1 46.989 41.542 2 2.2756E-23 54002 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.78 98.009 10814000 0 10814000 0 0 0 0 0 0 0 0 0 0 0 0 0 32193 2889 29388 270555 214713 214713 1 LQSEIGK Unmodified 773.42832 0.42831841 3352 Q8N5S9 CAMKK1 Calcium/calmodulin-dependent protein kinase kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 15.951 12.642 2 0.02978 16718 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.262 14.808 98183000 21496000 75355000 1331700 0 0 0 0 0 0 0 0 0 0 0 0 32194 3352 29389 270556;270557;270558 214714 214714 1 LQSEINMAATETR Oxidation (M) 1478.7035 0.70350699 399 O60437 PPL Periplakin yes yes 0 1 0 By MS/MS 10 0 1 1 52.376 52.539 2 0.0018669 59125 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 56.729 10.9 9353800 0 0 0 0 0 0 0 0 9353800 0 0 0 0 0 0 32195 399 29390 270559 214715 214715 504 1 LQSEPESIRK Unmodified 1185.6354 0.63535107 885 P09496 CLTA Clathrin light chain A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 1 2 2 2 2 2 2 2 17.402 17.587 2;3 0.0013365 16148 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.885 51.199 1298400000 0 0 0 38846000 70096000 76586000 61099000 43363000 44297000 77666000 140100000 221900000 70652000 156050000 297740000 32196 885 29391 270560;270561;270562;270563;270564;270565;270566;270567;270568;270569;270570;270571;270572;270573;270574;270575;270576;270577;270578;270579;270580;270581;270582 214716;214717;214718;214719;214720;214721;214722;214723;214724;214725;214726;214727;214728;214729;214730 214719 5 LQSEVAELK Unmodified 1015.555 0.55497548 1728 P53990 IST1 IST1 homolog yes yes 0 0 0 By MS/MS 10 0 1 1 38.139 38.878 2 0.009035 42286 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.897 16.931 26560000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26560000 32197 1728 29392 270583 214731 214731 1 LQSEVQNTK Unmodified 1045.5404 0.54038805 4264 Q9BZF9 UACA Uveal autoantigen with coiled-coil domains and ankyrin repeats yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 9.7844 9.9405 2 0.004021 8603 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 88.177 49.939 12253000 0 0 0 419110 0 0 750870 618870 818410 0 0 3936300 1111900 906680 3691100 32198 4264 29393 270584;270585;270586;270587;270588;270589;270590;270591 214732 214732 1 LQSGICHLFR Unmodified 1229.6339 0.63391128 1009 P14868 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 59.524 59.824 3 0.020788 67423 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.336 33.014 16399000 0 0 0 0 0 1862100 0 0 2269800 0 0 4523500 0 3116100 4627400 32199 1009 29394 270592;270593;270594;270595;270596 214733 214733 1 LQSGVNTLQGFK Unmodified 1290.6932 0.6932003 4552 Q9NPI1 BRD7 Bromodomain-containing protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 57.443 57.563 2 0.0054664 65433 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 74.424 42.284 152640000 0 0 0 8717400 6929200 12965000 10172000 10825000 11991000 18434000 12798000 19903000 13781000 11182000 14942000 32200 4552 29395 270597;270598;270599;270600;270601;270602;270603;270604;270605;270606;270607;270608 214734;214735;214736;214737;214738;214739 214734 6 LQSHLLTEPVK Unmodified 1263.7187 0.71868677 646 O95361 TRIM16 Tripartite motif-containing protein 16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 5 2 2 1 54.37 48.005 2;3 5.0921E-08 65881 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 169.52 106.3 423160000 333160000 77082000 12912000 0 0 0 0 0 0 0 0 0 0 0 0 32201 646 29396 270609;270610;270611;270612;270613 214740;214741;214742;214743;214744 214743 3 LQSIGTENTEENR Unmodified 1489.7009 0.70086445 771 P04075 ALDOA Fructose-bisphosphate aldolase A yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 27.314 27.855 2 0.0014609 28923 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.342 68.909 37171000 0 0 0 0 0 0 0 0 0 0 7960100 9528800 0 5402700 14280000 32202 771 29397 270614;270615;270616;270617 214745;214746;214747;214748 214745 4 LQSIGTENTEENRR Unmodified 1645.802 0.80197548 771 P04075 ALDOA Fructose-bisphosphate aldolase A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 22.374 22.567 3 6.0239E-17 22419 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.023 78.509 410220000 0 0 0 12741000 6578400 10972000 12010000 12797000 8703200 17364000 98614000 100530000 16669000 0 113240000 32203 771 29398 270618;270619;270620;270621;270622;270623;270624;270625;270626;270627;270628 214749;214750;214751;214752;214753;214754;214755;214756;214757;214758;214759;214760;214761 214753 13 LQSLDALLEMK Oxidation (M) 1275.6744 0.67443869 664 O95466 FMNL1 Formin-like protein 1 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 80.76 80.857 2 0.00021141 93474 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 95.523 55.456 32527000 0 0 0 0 2888600 0 4532600 3813300 2961800 7342000 6861000 0 0 4127800 0 32204 664 29399 270629;270630;270631;270632;270633;270634;270635 214762;214763;214764;214765 214762 806 4 LQSLLAK Unmodified 771.48544 0.48543935 5282 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.6 3.2 4 1 1 2 1 1 40.625 39.634 2 0.014549 51889 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.52 12.848 228880000 312010 147020000 147860 0 0 0 0 81403000 0 0 0 0 0 0 0 32205 5282 29400 270636;270637;270638;270639;270640 214766;214767 214766 2 LQSLTDDLR Unmodified 1059.556 0.55603811 4468 Q9H9A6 LRRC40 Leucine-rich repeat-containing protein 40 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 52.931 52.993 2 2.134E-05 59013 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 135.83 50.619 206860000 0 0 0 31456000 0 0 0 28004000 37985000 0 65123000 0 0 44289000 0 32206 4468 29401 270641;270642;270643;270644;270645 214768;214769;214770;214771;214772 214772 2 LQSLTENLTK Unmodified 1145.6292 0.62920306 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.262 49.421 2 2.1566E-08 56562 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 156.35 99.8 1480600000 0 0 0 243850000 79629000 63410000 84502000 370080000 63085000 84194000 102700000 142350000 128190000 54623000 64037000 32207 1029 29402 270646;270647;270648;270649;270650;270651;270652;270653;270654;270655;270656;270657 214773;214774;214775;214776;214777;214778;214779;214780;214781;214782;214783;214784;214785;214786;214787 214786 15 LQSNSNTGIPR Unmodified 1185.6102 0.61019895 2561 Q15652 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 24.222 24.64 2 0.01492 25462 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 54.982 21.185 30504000 0 0 0 0 0 0 0 3710800 0 4151000 3597900 6357800 5339500 0 7346600 32208 2561 29403 270658;270659;270660;270661;270662;270663 214788;214789;214790 214790 2 LQSPEFQSLFTEGLK Unmodified 1722.8829 0.88285156 3952 Q96Q11 TRNT1 CCA tRNA nucleotidyltransferase 1, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 92.101 89.74 2 2.8496E-15 111598 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.77 87.724 86762000 0 82159000 0 0 0 0 0 0 0 0 0 0 0 0 4602700 32209 3952 29404 270664;270665 214791;214792 214791 2 LQSPLPGESAAK Unmodified 1196.6401 0.6401021 2648 Q2KHR2 RFX7 DNA-binding protein RFX7 yes yes 0 0 0 By MS/MS 2 0 1 1 47.835 42.272 2 0.0069433 55039 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.276 50.181 11155000 0 11155000 0 0 0 0 0 0 0 0 0 0 0 0 0 32210 2648 29405 270666 214793 214793 1 LQSQLLSLEK Unmodified 1157.6656 0.66558856 1630 P50570 DNM2 Dynamin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 67.293 65.986 2 8.3346E-06 74995 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 147.75 0 1523400000 101030000 621810000 21927000 35858000 34435000 66632000 66201000 42875000 40841000 77150000 75219000 70052000 62878000 80683000 125790000 32211 1630 29406 270667;270668;270669;270670;270671;270672;270673;270674;270675;270676;270677;270678;270679;270680;270681;270682 214794;214795;214796;214797;214798;214799;214800;214801;214802;214803;214804;214805;214806;214807 214806 13 LQSQLQENEEFQK Unmodified 1619.7791 0.77911477 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 43.842 43.619 2 0.0044728 48871 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 61.353 33.611 4835100 0 0 0 0 2192400 0 2642600 0 0 0 0 0 0 0 0 32212 5049 29407 270683;270684 214808 214808 1 LQSQPTDTDGGR Unmodified 1273.5899 0.58985744 2734 Q5JSH3 WDR44 WD repeat-containing protein 44 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.661 11.834 2 1.2878E-08 10497 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 137.95 95.557 58898000 0 0 0 0 2624600 3097800 2926900 4160300 3162900 3970200 5171300 9429000 4400400 8194000 11760000 32213 2734 29408 270685;270686;270687;270688;270689;270690;270691;270692;270693;270694;270695 214809;214810;214811;214812;214813;214814;214815;214816;214817;214818;214819;214820 214819 12 LQSQPTDTDGGRLK Unmodified 1514.7689 0.76888444 2734 Q5JSH3 WDR44 WD repeat-containing protein 44 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 21.692 20.637 3 1.8847E-10 27005 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.613 67.214 673210000 29122000 333470000 28666000 14856000 0 17546000 20966000 12176000 0 0 38601000 54859000 33629000 25249000 64070000 32214 2734 29409 270696;270697;270698;270699;270700;270701;270702;270703;270704;270705;270706;270707;270708;270709;270710;270711 214821;214822;214823;214824;214825;214826;214827;214828;214829;214830;214831;214832;214833;214834;214835;214836;214837;214838;214839 214824 19 LQSQTENLK Unmodified 1059.556 0.55603811 100 CON__Q7RTT2;CON__Q8N1N4-2;Q8N1N4 KRT78 Keratin, type II cytoskeletal 78 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.758 15.928 2 1.6273E-05 15725 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 153.04 64.093 + 816290000 0 0 0 171200000 24985000 50548000 36989000 111370000 19924000 59227000 81963000 98861000 84507000 44546000 32170000 32215 100 29410 270712;270713;270714;270715;270716;270717;270718;270719;270720;270721;270722;270723 214840;214841;214842;214843;214844;214845;214846;214847;214848;214849;214850;214851;214852 214847 13 LQSQTENLKK Unmodified 1187.651 0.65100113 100 CON__Q7RTT2;CON__Q8N1N4-2;Q8N1N4 KRT78 Keratin, type II cytoskeletal 78 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 10.47 10.562 3 0.02241 9193 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 50.034 25.944 + 186010000 0 0 0 38826000 6963400 4745100 10543000 61347000 4644400 9752400 0 30900000 12393000 5898100 0 32216 100 29411 270724;270725;270726;270727;270728;270729;270730;270731;270732;270733 214853;214854 214854 0 LQSQYASSEATISQLR Unmodified 1780.8955 0.89554151 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 61.872 62.277 2 0.00021598 70442 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.552 65.316 21442000 0 0 0 0 0 0 0 0 0 0 4611300 5241900 0 3517600 8070900 32217 2495 29412 270734;270735;270736;270737 214855;214856;214857 214855 3 LQSQYASSEATISQLRSELAK Unmodified 2309.1863 0.18630381 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 1 By MS/MS 2 0 1 1 85.706 77.575 3 7.3648E-18 101236 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.206 87.114 24447000 24447000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32218 2495 29413 270738 214858;214859 214859 2 LQSRPAAPPAPGPGQLTLR Unmodified 1926.0799 0.079928661 4019 Q99536 VAT1 Synaptic vesicle membrane protein VAT-1 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.201 62.298 3 8.516E-13 70867 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 90.968 84.7 497900000 0 0 0 23448000 18937000 37307000 24775000 35116000 16102000 50454000 53488000 65949000 38681000 39830000 93812000 32219 4019 29414 270739;270740;270741;270742;270743;270744;270745;270746;270747;270748;270749;270750 214860;214861;214862;214863;214864;214865;214866;214867;214868;214869;214870;214871 214862 12 LQSSDGEIFEVDVEIAK Unmodified 1877.9258 0.92583859 1946 P63208 SKP1 S-phase kinase-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 8 2 7 2 1 88.886 83.065 2;3 4.6545E-13 100230 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 133.71 118.17 256060000 151890000 73724000 30447000 0 0 0 0 0 0 0 0 0 0 0 0 32220 1946 29415 270751;270752;270753;270754;270755;270756;270757;270758;270759;270760 214872;214873;214874;214875;214876;214877;214878;214879;214880;214881;214882;214883;214884 214874 11 LQSSEAEVR Unmodified 1017.5091 0.50908792 4817 Q9P2E9 RRBP1 Ribosome-binding protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 15.005 15.254 2 0.014025 14353 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 58.916 14.224 43162000 0 0 0 0 2124900 0 4576400 0 0 0 7473000 7125300 5284700 7560600 9017400 32221 4817 29416 270761;270762;270763;270764;270765;270766;270767 214885;214886;214887 214885 3 LQSSLESEVSVLASK Unmodified 1575.8356 0.83556702 4792 Q9P0K7 RAI14 Ankycorbin yes yes 0 0 0 By MS/MS 2 0 1 1 83.981 79.26 2 0.031723 98564 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 48.277 25.359 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32222 4792 29417 270768 214888 214888 1 LQSSNIFTVAK Unmodified 1206.6608 0.66083754 2178 Q10567 AP1B1 AP-1 complex subunit beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64.475 63.361 2 4.7077E-07 84874 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 125.48 74.873 971930000 331400000 354910000 8884300 19329000 11869000 24651000 18198000 17418000 15989000 33172000 26943000 25107000 20332000 24071000 39652000 32223 2178 29418 270769;270770;270771;270772;270773;270774;270775;270776;270777;270778;270779;270780;270781;270782;270783 214889;214890;214891;214892;214893;214894;214895;214896;214897;214898;214899;214900;214901;214902;214903;214904 214897 16 LQSSQEPEAPPPR Unmodified 1434.7103 0.71030693 5031 Q9UNF1 MAGED2 Melanoma-associated antigen D2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 26.626 26.826 2;3 1.5966E-11 27403 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 120.68 109.85 258610000 0 0 0 14942000 15774000 23061000 19680000 16766000 14092000 22797000 26828000 36587000 24125000 19830000 24124000 32224 5031 29419 270784;270785;270786;270787;270788;270789;270790;270791;270792;270793;270794;270795;270796;270797;270798;270799;270800;270801;270802;270803;270804;270805;270806;270807 214905;214906;214907;214908;214909;214910;214911;214912;214913;214914;214915;214916;214917;214918 214914 13 LQSSQEPEAPPPRDVALLQGR Unmodified 2287.1921 0.19205789 5031 Q9UNF1 MAGED2 Melanoma-associated antigen D2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 64.953 64.75 3 1.8224E-15 74310 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 88.176 68.357 1720400000 0 0 9695500 90433000 87626000 153310000 125180000 124860000 111040000 148540000 174110000 184720000 132340000 159790000 218730000 32225 5031 29420 270808;270809;270810;270811;270812;270813;270814;270815;270816;270817;270818;270819;270820 214919;214920;214921;214922;214923;214924;214925;214926;214927;214928;214929;214930;214931;214932;214933;214934;214935;214936;214937;214938;214939;214940;214941;214942;214943;214944;214945;214946;214947;214948 214940 30 LQSSSASYGGGFGGGSCQLGGGR Unmodified 2145.9498 0.9497787 73;981 CON__P13646-1;P13646;CON__ENSEMBL:ENSP00000377550 KRT13 Keratin, type I cytoskeletal 13 no no 0 0 0 By MS/MS 10 0 1 1 53.47 54.124 2 2.926E-66 60982 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 148.33 134.65 + 7790800 0 0 0 0 0 0 0 0 0 0 0 7790800 0 0 0 32226 73;981 29421 270821 214949 214949 1 LQSTNFALAE Unmodified 1092.5451 0.54513908 4070 Q99933 BAG1 BAG family molecular chaperone regulator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.025 68.105 2 0.0056704 77328 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.016 56.061 128190000 0 0 0 7348700 6342200 7335900 7981300 7052100 4978500 8632200 15070000 14211000 10360000 12389000 26490000 32227 4070 29422 270822;270823;270824;270825;270826;270827;270828;270829;270830;270831;270832;270833 214950;214951;214952;214953;214954;214955;214956 214951 7 LQSVQALTEIQEFISFISK Unmodified 2180.1729 0.17288557 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS 2.67 0.471 1 2 3 105.55 101.53 2;3 0.0011639 121957 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 61.375 48.239 9654600 0 9654600 0 0 0 0 0 0 0 0 0 0 0 0 0 32228 1986 29423 270834;270835;270836 214957;214958 214958 2 LQSVQATGPSSPGR Unmodified 1383.7106 0.71064128 1162 P23508 MCC Colorectal mutant cancer protein yes yes 0 0 0 By MS/MS 10 0 1 1 28.4 29.095 2 0.0094951 30346 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.652 51.189 3750300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3750300 32229 1162 29424 270837 214959 214959 0 LQSVSSAIHLCDK Unmodified 1456.7344 0.73441319 320 O43353 RIPK2 Receptor-interacting serine/threonine-protein kinase 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 62.087 55.301 2;3 0.0084887 74658 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.721 45.691 75481000 65980000 0 9500200 0 0 0 0 0 0 0 0 0 0 0 0 32230 320 29425 270838;270839;270840 214960;214961 214961 2 LQTASDESYK Unmodified 1140.5299 0.52988294 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 18.08 17.603 2 0.0019733 17442 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 97.635 67.023 167570000 6040300 82166000 0 5028400 4240500 10940000 3235400 0 5394300 6372100 7955100 8922600 6155400 7475500 13646000 32231 2344 29426 270841;270842;270843;270844;270845;270846;270847;270848;270849;270850;270851;270852;270853 214962;214963;214964;214965;214966;214967;214968 214967 7 LQTASDESYKDPTNIQSK Unmodified 2023.9698 0.96982867 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.7 3.52 2 1 7 1 2 1 1 1 1 1 1 1 38.311 36.759 3 3.4521E-28 41611 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 104.44 92.414 411340000 11042000 320930000 0 10510000 0 4349700 11851000 11278000 3949600 0 0 0 11280000 0 26158000 32232 2344 29427 270854;270855;270856;270857;270858;270859;270860;270861;270862;270863 214969;214970;214971;214972;214973;214974;214975;214976;214977;214978;214979 214979 11 LQTDISELENRELLEQVAEFEK Unmodified 2632.3232 0.32319122 4559 Q9NQ48 LZTFL1 Leucine zipper transcription factor-like protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 95.283 89.598 3 5.7524E-07 113798 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.853 46.646 19811000 18110000 1701000 0 0 0 0 0 0 0 0 0 0 0 0 0 32233 4559 29428 270864;270865 214980;214981 214981 2 LQTFLETK Unmodified 978.5386 0.53859714 2086 Q03001 DST Dystonin yes yes 0 0 0 By MS/MS 2 0 1 1 59.128 53.285 2 0.012113 68624 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.33 40.528 20530000 0 20530000 0 0 0 0 0 0 0 0 0 0 0 0 0 32234 2086 29429 270866 214982 214982 1 LQTFLSK Unmodified 835.48035 0.48035398 2189 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.212 47.377 2 0.023435 53683 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 85.265 13.316 246340000 0 0 0 15065000 18108000 22902000 19692000 12573000 12977000 23898000 21417000 25103000 21542000 18424000 34642000 32235 2189 29430 270867;270868;270869;270870;270871;270872;270873;270874;270875;270876;270877;270878 214983;214984;214985;214986;214987;214988;214989 214983 7 LQTINLSFNR Unmodified 1204.6564 0.65642086 4468 Q9H9A6 LRRC40 Leucine-rich repeat-containing protein 40 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.387 74.45 2 0.00082044 84930 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 140.14 79.457 266800000 0 0 0 11866000 17910000 21680000 21152000 20733000 18180000 29693000 25060000 33306000 16614000 18044000 32562000 32236 4468 29431 270879;270880;270881;270882;270883;270884;270885;270886;270887;270888;270889;270890 214990;214991;214992;214993;214994;214995;214996;214997;214998;214999;215000;215001;215002 214998 13 LQTLATNLLASEASDK Unmodified 1673.8836 0.88357984 5197 Q9Y4E6 WDR7 WD repeat-containing protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 78.956 78.552 2 2.1998E-15 90876 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 123.64 98.253 98312000 0 61669000 0 0 0 3027400 0 0 2515800 5846100 5032000 6000100 4402600 4187600 5631300 32237 5197 29432 270891;270892;270893;270894;270895;270896;270897;270898;270899;270900;270901 215003;215004;215005;215006;215007;215008;215009;215010;215011;215012;215013 215011 11 LQTLDIGSNLEK Unmodified 1329.714 0.71399532 3418 Q8NDI1 EHBP1 EH domain-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 68.83 68.468 2 0.0057565 78938 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 63.283 40.502 105910000 0 54062000 0 2466000 3963900 4389200 3679100 2957500 3162400 0 5311500 5879300 4547200 4040000 11455000 32238 3418 29433 270902;270903;270904;270905;270906;270907;270908;270909;270910;270911;270912;270913 215014;215015;215016;215017;215018;215019;215020;215021 215021 8 LQTLQSENSNLRK Unmodified 1529.8162 0.81616898 2382 Q14161 GIT2 ARF GTPase-activating protein GIT2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 29.789 29.223 3 0.00021734 31494 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 66.989 33.207 256150000 56274000 0 8304000 8079900 11820000 0 10698000 16060000 15484000 22478000 22901000 13104000 25170000 23727000 22051000 32239 2382 29434 270914;270915;270916;270917;270918;270919;270920;270921;270922;270923;270924;270925;270926 215022;215023;215024;215025;215026;215027;215028;215029;215030;215031 215023 10 LQTLSPSHK Unmodified 1009.5556 0.55564418 3861 Q96GY0 ZC2HC1A Zinc finger C2HC domain-containing protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 20.914 17.165 2 0.020613 22816 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.043 44.858 37602000 19980000 12032000 5590100 0 0 0 0 0 0 0 0 0 0 0 0 32240 3861 29435 270927;270928;270929 215032 215032 1 LQTLVSEQPNK Unmodified 1255.6772 0.67721588 3151 Q86UP2 KTN1 Kinectin yes yes 0 0 0 By MS/MS 2 0 1 1 43.108 37.96 2 8.3326E-23 49504 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 188.66 146.06 100240000 0 100240000 0 0 0 0 0 0 0 0 0 0 0 0 0 32241 3151 29436 270930 215033;215034 215034 2 LQTMKEELDFQK Oxidation (M) 1524.7494 0.74939455 757 P02545 LMNA Prelamin-A/C;Lamin-A/C yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 41.752 41.852 3 0.00057172 46093 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 66.023 56.89 35842000 0 0 0 12345000 0 0 5754900 0 0 0 0 17742000 0 0 0 32242 757 29437 270931;270932;270933 215035;215036 215035 908 2 LQTPNTFPK Unmodified 1044.5604 0.56039521 2458 Q14978 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47.153 46.11 2 0.0035789 61961 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 115.49 88.357 1949000000 77193000 766920000 13081000 78805000 63325000 77050000 71888000 90583000 60477000 92874000 117360000 141020000 106140000 81519000 110730000 32243 2458 29438 270934;270935;270936;270937;270938;270939;270940;270941;270942;270943;270944;270945;270946;270947;270948 215037;215038;215039;215040;215041;215042;215043;215044;215045;215046;215047;215048;215049;215050;215051;215052;215053 215045 16 LQTQASATVAIPK Unmodified 1326.7507 0.75071518 2033 Q00341 HDLBP Vigilin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 51.65 52.022 2 0.018664 57699 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.44 32.107 25026000 0 0 0 0 0 0 0 0 0 6176600 5750800 0 0 4301500 8796700 32244 2033 29439 270949;270950;270951;270952 215054 215054 1 LQTQGLGTALK Unmodified 1128.6503 0.65027285 3866 Q96HE7;Q86YB8 ERO1L;ERO1LB ERO1-like protein alpha;ERO1-like protein beta yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.17 3.85 2 1 3 1 2 1 1 1 52.632 49.627 2 2.2881E-06 64328 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.45 30.7 489900000 64463000 393040000 0 0 0 7602100 8092100 0 0 0 0 0 0 0 16701000 32245 3866 29440 270953;270954;270955;270956;270957;270958 215055;215056;215057;215058;215059;215060 215057 5 LQTQVFK Unmodified 862.49125 0.49125301 1511 P46781 RPS9 40S ribosomal protein S9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.877 37.058 2 0.023018 39673 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 103.29 44.625 1610300000 0 0 0 79645000 99337000 87765000 87366000 106290000 78664000 171050000 134360000 206790000 201730000 125010000 232270000 32246 1511 29441 270959;270960;270961;270962;270963;270964;270965;270966;270967;270968;270969;270970 215061;215062;215063;215064;215065;215066;215067;215068;215069 215067 9 LQTSSVLVSGLR Unmodified 1258.7245 0.72450043 1137 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 68.866 68.946 2 0.0023783 80037 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 63.283 34.122 49518000 0 0 0 2377000 1825100 0 2593900 0 2168000 5496200 7318100 7900800 3080600 5686900 11072000 32247 1137 29442 270971;270972;270973;270974;270975;270976;270977;270978;270979;270980;270981 215070;215071;215072;215073;215074;215075;215076;215077;215078;215079;215080 215079 11 LQTTLLDVTK Unmodified 1130.6547 0.65468953 3431 Q8NEX9 SDR9C7 Short-chain dehydrogenase/reductase family 9C member 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 67.233 67.193 2 0.0043308 77054 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 73.233 62.968 34844000 0 0 0 17909000 1619800 2433800 1961300 4787700 0 2056400 1947500 0 2128400 0 0 32248 3431 29443 270982;270983;270984;270985;270986;270987;270988;270989 215081;215082;215083;215084;215085 215083 4 LQTVAEK Unmodified 787.44397 0.44396847 2608 Q16531 DDB1 DNA damage-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 12.192 11.425 2 0.017113 13972 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.16 24.468 1576300000 64798000 1359400000 13747000 8712000 7337900 7968500 6522900 0 4957000 11170000 14404000 19410000 11033000 13899000 32976000 32249 2608 29444 270990;270991;270992;270993;270994;270995;270996;270997;270998;270999;271000;271001;271002;271003;271004 215086;215087;215088;215089 215086 4 LQTYQPEVVK Unmodified 1203.6499 0.6499385 488 O75376 NCOR1 Nuclear receptor corepressor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 46.559 45.78 2 0.0015655 50646 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 126.24 98.408 227610000 0 81541000 0 7944200 11696000 12430000 13392000 11819000 12210000 16512000 0 19553000 0 17461000 23051000 32250 488 29445 271005;271006;271007;271008;271009;271010;271011;271012;271013;271014;271015;271016 215090;215091;215092;215093;215094;215095;215096;215097 215093 5 LQVAHTK Unmodified 795.46029 0.46028724 398 O60343 TBC1D4 TBC1 domain family member 4 yes yes 0 0 0 By MS/MS By MS/MS By matching 2 0 3 1 1 1 8.8107 5.7252 2 0.023949 10229 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 131.04 50.66 292920000 174000000 60580000 58332000 0 0 0 0 0 0 0 0 0 0 0 0 32251 398 29446 271017;271018;271019 215098 215098 1 LQVDYTGLIQSYEQNETK Unmodified 2128.0324 0.032428925 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS 10 0 1 1 85.058 85.237 2 0.003183 98536 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.805 54.191 3766400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3766400 32252 2556 29447 271020 215099 215099 0 LQVEEVHQLSRK Unmodified 1464.8049 0.80487601 4587 Q9NR28 DIABLO Diablo homolog, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 42.629 37.392 3 6.5622E-05 51492 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.64 79.915 72202000 70028000 0 2173300 0 0 0 0 0 0 0 0 0 0 0 0 32253 4587 29448 271021;271022 215100 215100 1 LQVELDNVTGLLSQSDSK Unmodified 1945.0004 0.0004005156 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 6 2 24 2 4 2 2 2 2 2 2 2 2 2 2 2 2 2 88.427 87.526 2;3 6.5864E-147 104303 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 228.03 196.44 2362200000 20767000 1953500000 30278000 12266000 26833000 12954000 14491000 13111000 16978000 74441000 45124000 35861000 8667100 29427000 67546000 32254 1356 29449 271023;271024;271025;271026;271027;271028;271029;271030;271031;271032;271033;271034;271035;271036;271037;271038;271039;271040;271041;271042;271043;271044;271045;271046;271047;271048;271049;271050;271051;271052;271053;271054 215101;215102;215103;215104;215105;215106;215107;215108;215109;215110;215111;215112;215113;215114;215115;215116;215117;215118;215119;215120;215121;215122;215123;215124 215113 22 LQVEPAVDTSGVQCYGPGIEGQGVFR Unmodified 2762.3334 0.33337875 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 83.358 83.462 3 2.9876E-93 96796 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 142.21 129.15 446270000 0 0 0 0 14770000 16106000 6713300 20289000 20629000 69119000 64187000 57737000 11494000 34646000 130580000 32255 1124 29450 271055;271056;271057;271058;271059;271060;271061;271062;271063;271064;271065 215125;215126;215127;215128;215129;215130;215131;215132;215133;215134;215135;215136;215137;215138 215137 14 LQVEQEENR Unmodified 1143.552 0.55201537 4345 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 19.466 19.694 2 0.0033024 19998 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 130.56 78.159 129530000 0 0 0 7795300 7981100 13700000 0 10623000 0 15226000 12107000 15140000 14694000 14036000 18225000 32256 4345 29451 271066;271067;271068;271069;271070;271071;271072;271073;271074;271075;271076 215139;215140;215141;215142;215143;215144;215145;215146;215147;215148 215146 10 LQVLVGDVLK Unmodified 1082.6699 0.66994566 5040 Q9UNQ2 DIMT1 Probable dimethyladenosine transferase yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 80.078 79.987 2 0.022318 92472 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 46.158 10.278 3516600 0 0 0 0 977660 0 0 0 0 2538900 0 0 0 0 0 32257 5040 29452 271077;271078 215149 215149 1 LQVMANSR Unmodified 917.47529 0.47528537 2485 Q15046 KARS Lysine--tRNA ligase yes yes 0 0 0 By MS/MS 10 0 1 1 24.711 25.378 2 0.035078 25927 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.716 9.7159 35129000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35129000 32258 2485 29453 271079 215150 215150 1 LQVNQDGRIPVK Unmodified 1365.7728 0.7728476 2067 Q01970 PLCB3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 42.387 41.635 3 0.009371 57515 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.501 20.584 99977000 42762000 0 8437600 4909400 2217700 3182500 4108900 3808500 3247500 4061000 5909800 6129100 3299900 0 7902800 32259 2067 29454 271080;271081;271082;271083;271084;271085;271086;271087;271088;271089;271090;271091;271092 215151;215152;215153 215152 3 LQVSQQEDITK Unmodified 1287.667 0.66704513 1244 P29218 IMPA1 Inositol monophosphatase 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 36.699 35.298 2 5.9399E-13 38550 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 169.76 119.06 304880000 26974000 173590000 0 7414300 0 0 0 0 0 0 13309000 20645000 0 15186000 47759000 32260 1244 29455 271093;271094;271095;271096;271097;271098;271099 215154;215155;215156;215157;215158;215159 215156 3 LQVSQTEPAK Unmodified 1099.5873 0.58733824 3999 Q96T58 SPEN Msx2-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 23.426 23.395 2 0.014667 23061 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 65.224 10.448 18265000 0 0 0 2044200 2663800 3425900 3056700 4463600 2611100 0 0 0 0 0 0 32261 3999 29456 271100;271101;271102;271103;271104;271105;271106 215160;215161 215161 2 LQVTMPGIK Unmodified 985.56304 0.56303775 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 68.337 68.045 2 0.0071283 77933 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 73.248 22.282 394350000 0 52581000 0 0 20702000 20105000 24400000 30775000 22048000 31435000 30043000 40651000 33711000 32580000 55319000 32262 2172 29457 271107;271108;271109;271110;271111;271112;271113;271114;271115;271116;271117;271118;271119 215162;215163;215164;215165;215166;215167;215168;215169 215166 7 LQVTMPGIK Oxidation (M) 1001.558 0.55795237 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 1 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 17 1 2 1 2 2 2 2 1 1 1 1 1 42.885 43.011 2 0.013724 47769 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 52.786 10.311 191600000 0 0 0 10998000 16325000 11734000 22963000 23271000 19164000 16159000 12225000 17440000 18366000 9540100 13414000 32263 2172 29457 271120;271121;271122;271123;271124;271125;271126;271127;271128;271129;271130;271131;271132;271133;271134;271135;271136 215170;215171;215172;215173;215174;215175;215176;215177;215178;215179 215176 3525 2 LQVTNVLSQPLTQATVK Unmodified 1839.0466 0.046562847 789 P04844 RPN2 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 82.185 82.242 2 1.2632E-06 95150 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 100.55 78.354 45666000 0 0 0 1510000 2920100 3116200 2062100 3893600 2335900 5032800 4457600 7058900 2843300 0 10435000 32264 789 29458 271137;271138;271139;271140;271141;271142;271143;271144;271145;271146;271147 215180;215181;215182;215183;215184 215180 5 LQVVDQPLPVR Unmodified 1262.7347 0.73467118 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 1 2 2 1 2 2 2 2 1 2 2 69.016 69.151 2;3 2.9598E-05 78274 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 118.5 94.34 1941300000 0 0 0 78952000 73560000 242720000 129860000 81090000 60202000 187060000 209890000 205420000 112750000 182760000 377020000 32265 1565 29459 271148;271149;271150;271151;271152;271153;271154;271155;271156;271157;271158;271159;271160;271161;271162;271163;271164;271165;271166;271167 215185;215186;215187;215188;215189;215190;215191;215192;215193;215194;215195;215196;215197 215193 13 LQVVGRAGTGVDNVDLEAATRK Unmodified 2268.2186 0.21860699 304 O43175 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 0 0 2 By MS/MS 2 0 1 1 71.506 63.24 3 0.0096358 84783 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.392 39.588 34163000 34163000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32266 304 29460 271168 215198 215198 1 LQWQTTLGHAVLK Unmodified 1493.8354 0.83544786 2331 Q13619 CUL4A Cullin-4A yes yes 0 0 0 By MS/MS 2 0 1 1 82.546 74.416 3 0.025711 97434 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 34.05 15.977 8462700 8462700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32267 2331 29461 271169 215199 215199 1 LQYAVPIINQK Unmodified 1285.7394 0.73942221 4576 Q9NQT8 KIF13B Kinesin-like protein KIF13B yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching 10 0 5 1 1 1 1 1 74.229 74.282 2 0.0075411 86168 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 53.775 41.248 14860000 0 0 0 3241600 0 0 0 0 0 2718300 3243700 0 0 2160100 3496300 32268 4576 29462 271170;271171;271172;271173;271174 215200 215200 1 LQYAVPIISQQGEVAGR Unmodified 1827.9843 0.98429694 4350 Q9H1H9 KIF13A Kinesin-like protein KIF13A yes yes 0 0 0 By MS/MS 10 0 1 1 79.648 79.746 2 0.0075847 92194 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 50.207 34.07 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32269 4350 29463 271175 215201 215201 1 LQYEGIFIK Unmodified 1109.6121 0.61209643 2539 Q15459 SF3A1 Splicing factor 3A subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 78.385 77.263 2 0.0049392 89567 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 85.212 49.332 1262200000 361540000 87976000 97549000 29882000 33918000 58179000 50440000 50315000 54882000 58638000 62617000 87033000 48381000 71532000 109320000 32270 2539 29464 271176;271177;271178;271179;271180;271181;271182;271183;271184;271185;271186;271187;271188;271189;271190;271191 215202;215203;215204;215205;215206;215207;215208;215209;215210;215211;215212;215213;215214 215211 9 LQYHAGLASGLLNQQSLK Unmodified 1940.048 0.047959831 2926 Q6P2C8 MED27 Mediator of RNA polymerase II transcription subunit 27 yes yes 0 0 0 By MS/MS 10 0 1 1 74.378 74.717 3 9.8878E-05 85643 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.52 55.103 13030000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13030000 32271 2926 29465 271192 215215 215215 1 LQYLAAQNK Unmodified 1047.5713 0.57129425 3778 Q96CN4 EVI5L EVI5-like protein yes yes 0 0 0 By MS/MS 2 0 1 1 40.327 33.705 2 0.013805 46617 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.671 51.368 7876000 7876000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32272 3778 29466 271193 215216 215216 1 LQYYVPR Unmodified 937.50215 0.50215205 3701 Q93008 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 50.045 50.106 2 0.023344 56448 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 91.584 54.997 77100000 0 0 0 6577600 9599900 0 0 0 0 10996000 12490000 0 0 13352000 24085000 32273 3701 29467 271194;271195;271196;271197;271198;271199 215217;215218;215219 215217 3 LRAAEQYTPK Unmodified 1175.6299 0.62987176 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.9 3.81 6 2 12 3 3 2 1 1 1 1 1 1 1 1 1 1 1 1 24.356 22.744 2;3 0.0019815 23124 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 65.719 48.489 7125800000 5377400000 652070000 195570000 48804000 30237000 95410000 45960000 51899000 37849000 97556000 109270000 103460000 44472000 72001000 163760000 32274 1565 29468 271200;271201;271202;271203;271204;271205;271206;271207;271208;271209;271210;271211;271212;271213;271214;271215;271216;271217;271218;271219 215220;215221;215222;215223;215224;215225;215226;215227;215228;215229;215230;215231;215232;215233;215234;215235;215236;215237;215238;215239 215231 17 LRAEGPQEWVFQECK Unmodified 1875.8938 0.89376737 1006 P14735 IDE Insulin-degrading enzyme yes yes 0 0 1 By MS/MS By MS/MS 4.67 3.77 2 1 2 1 76.469 71.194 2;3 0.00061172 93196 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.431 63.399 131810000 126230000 0 0 0 0 0 0 0 0 0 0 0 0 0 5576700 32275 1006 29469 271220;271221;271222 215240;215241;215242 215241 2 LRAEIDNVK Unmodified 1056.5928 0.59275797 74 CON__P13647;P13647 KRT5 Keratin, type II cytoskeletal 5 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.095 27.293 2 8.2456E-05 29576 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 146.81 83.245 + 2450000000 0 0 0 393710000 158170000 272260000 143800000 293600000 114610000 237860000 186510000 178880000 248930000 113750000 107950000 32276 74 29470 271223;271224;271225;271226;271227;271228;271229;271230;271231;271232;271233;271234 215243;215244;215245;215246;215247;215248;215249 215243 0 LRAEIDNVKK Unmodified 1184.6877 0.68772099 74 CON__P13647;P13647 KRT5 Keratin, type II cytoskeletal 5 yes no 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 2 2 2 1 19.946 20.128 2;3 0.012766 21021 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 89.679 75.87 + 1944900000 0 0 0 404090000 86689000 77237000 76198000 423220000 56420000 160400000 92948000 258310000 199220000 74901000 35247000 32277 74 29471 271235;271236;271237;271238;271239;271240;271241;271242;271243;271244;271245;271246;271247;271248;271249;271250;271251;271252;271253;271254;271255;271256;271257 215250;215251;215252;215253;215254;215255;215256;215257;215258;215259;215260 215260 1 LRAEIENIK Unmodified 1084.6241 0.6240581 77 CON__P19013;P19013 KRT4 Keratin, type II cytoskeletal 4 no no 0 0 1 By matching By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 36.88 37.047 2 0.045999 41026 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 109.29 44.038 + 87210000 0 0 0 2777700 0 0 19963000 45734000 0 0 0 3852200 14883000 0 0 32278 77 29472 271258;271259;271260;271261;271262 215261 215261 0 LRAEIENIKK Unmodified 1212.719 0.71902112 77 CON__P19013;P19013 KRT4 Keratin, type II cytoskeletal 4 no no 0 0 2 By MS/MS By MS/MS By matching 10 0 3 1 1 1 28.412 28.593 3 0.02107 30976 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 72.434 44.953 + 141000000 0 0 0 0 0 0 54726000 47959000 0 0 0 0 38314000 0 0 32279 77 29473 271263;271264;271265 215262 215262 0 LRAELDEVNK Unmodified 1185.6354 0.63535107 2094 Q03252 LMNB2 Lamin-B2 yes yes 0 0 1 By MS/MS 2 0 1 1 36.48 33.096 3 0.034229 41671 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 46.706 31.077 18549000 0 0 18549000 0 0 0 0 0 0 0 0 0 0 0 0 32280 2094 29474 271266 215263 215263 1 LRAEPDHMVLGK Unmodified 1364.7235 0.72345457 1441 P41252 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 1 1 2 38.022 38.244 3 1.3972E-06 41431 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 95.417 81.608 418310000 0 0 0 12102000 14015000 34419000 20140000 26265000 16493000 30733000 37946000 60146000 28302000 34447000 103310000 32281 1441 29475 271267;271268;271269;271270;271271;271272;271273;271274;271275;271276;271277;271278;271279 215264;215265;215266;215267;215268;215269;215270;215271;215272;215273;215274 215272 11 LRAEPDHMVLGK Oxidation (M) 1380.7184 0.71836919 1441 P41252 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 0 1 1 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 16 2 1 2 2 1 1 1 2 1 1 2 25.409 25.664 3 0.0034528 27748 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 46.985 33.977 225170000 0 0 0 17666000 0 991330 25483000 23484000 9051200 14860000 18594000 32956000 18118000 14112000 49853000 32282 1441 29475 271280;271281;271282;271283;271284;271285;271286;271287;271288;271289;271290;271291;271292;271293;271294;271295 215275;215276;215277;215278;215279 215278 2270 2 LRAESEVPIVK Unmodified 1239.7187 0.71868677 2759 Q5SW79;Q96L14 CEP170;CEP170P1 Centrosomal protein of 170 kDa;Cep170-like protein yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 45.236 45.093 3 0.0052561 49628 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 40.015 27.841 240420000 0 0 16514000 14120000 13326000 17654000 18997000 15086000 20614000 19962000 16738000 24449000 21884000 17955000 23124000 32283 2759 29476 271296;271297;271298;271299;271300;271301;271302;271303;271304;271305;271306;271307;271308 215280;215281;215282;215283;215284;215285;215286;215287;215288;215289;215290;215291 215288 12 LRAETEQGEQQR Unmodified 1443.7066 0.70661853 2501 Q15149 PLEC Plectin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 7.7678 7.9307 3 4.3284E-08 6557 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 125.36 109.82 193840000 0 0 0 0 7254800 11353000 0 10733000 10766000 17268000 43663000 30827000 19803000 25924000 16244000 32284 2501 29477 271309;271310;271311;271312;271313;271314;271315;271316;271317;271318 215292;215293;215294;215295;215296;215297;215298;215299;215300;215301 215300 9 LRAFHNEAQVNPER Unmodified 1679.8492 0.84920044 1067 P17987 TCP1 T-complex protein 1 subunit alpha yes yes 0 0 1 By matching By MS/MS By MS/MS 10 0 3 1 1 1 30.715 31.06 3 0.011668 32285 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.592 22.239 20465000 0 0 0 0 0 6309500 0 0 0 0 0 0 4993800 0 9162200 32285 1067 29478 271319;271320;271321 215302 215302 1 LRAFHNEAQVNPERK Unmodified 1807.9442 0.94416346 1067 P17987 TCP1 T-complex protein 1 subunit alpha yes yes 0 0 2 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 25 1 1 2 2 3 2 2 2 2 2 3 3 26.765 27.028 3;4 3.3798E-06 26303 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.633 72.578 867280000 0 0 0 14918000 3925600 87041000 27813000 25949000 47707000 32342000 82506000 116830000 92078000 81363000 254800000 32286 1067 29479 271322;271323;271324;271325;271326;271327;271328;271329;271330;271331;271332;271333;271334;271335;271336;271337;271338;271339;271340;271341;271342;271343;271344;271345;271346 215303;215304;215305;215306;215307;215308;215309;215310;215311;215312;215313;215314;215315;215316;215317;215318;215319;215320 215307 14 LRALAEEVEQVHR Unmodified 1548.8372 0.83723877 4094 Q9BQE5 APOL2 Apolipoprotein L2 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 2 1 2 2 2 2 1 2 47.984 48.324 3;4 0.00015221 53271 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.285 57.003 151720000 0 0 0 0 0 19980000 0 4269900 16198000 13816000 0 27488000 22054000 8017700 39893000 32287 4094 29480 271347;271348;271349;271350;271351;271352;271353;271354;271355;271356;271357;271358;271359;271360 215321;215322;215323;215324;215325;215326;215327;215328;215329;215330;215331 215324 9 LRAQASGSAHSTPNLGHPEDSGVSAPAPGK Unmodified 2895.4223 0.42234519 463 O75150 RNF40 E3 ubiquitin-protein ligase BRE1B yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 2 1 1 1 1 1 1 1 1 1 40.972 39.852 4;5 7.2815E-113 42915 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 131.03 124.73 169680000 77747000 0 0 0 0 0 3310600 8597400 5117100 11762000 10007000 10388000 9781600 6915300 26058000 32288 463 29481 271361;271362;271363;271364;271365;271366;271367;271368;271369;271370;271371 215332;215333;215334;215335;215336;215337;215338;215339;215340;215341;215342;215343;215344 215333 13 LRAQTTAQASTPGQPPPQPQAPSHAAGQSALPQR Unmodified 3444.7611 0.76106072 3915 Q96L91 EP400 E1A-binding protein p400 yes yes 0 0 1 By MS/MS By matching By matching By matching 10 0 4 1 1 1 1 46.307 46.78 4 5.2935E-05 52677 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 25.531 20.319 24715000 0 0 0 0 0 0 0 0 0 5431000 0 6159500 0 5288200 7836800 32289 3915 29482 271372;271373;271374;271375 215345 215345 1 LRAYQDQISPVPGAPK Unmodified 1738.9366 0.93661847 3728 Q969V6 MKL1 MKL/myocardin-like protein 1 yes yes 0 0 1 By MS/MS By matching By matching 10 0 3 1 1 1 54.054 54.273 3 0.0274 61448 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 28.58 9.7477 9135000 0 0 0 0 0 0 3880400 0 1977800 0 3276800 0 0 0 0 32290 3728 29483 271376;271377;271378 215346 215346 1 LRCVFEMPNENDK Oxidation (M) 1666.7443 0.74432595 4794 Q9P0L0 VAPA Vesicle-associated membrane protein-associated protein A yes yes 0 1 1 By MS/MS 2 0 1 1 50.24 42.339 3 0.0075887 58384 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.136 49.304 26266000 26266000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32291 4794 29484 271379 215347 215347 6154 1 LRDAAHELNEEK Unmodified 1423.7056 0.7055559 566 O75962 TRIO Triple functional domain protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 18.455 17.706 3 0.0028228 18029 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 58.32 33.467 34617000 14348000 0 0 3076900 0 3885900 2595100 0 0 3706600 0 0 0 0 7004900 32292 566 29485 271380;271381;271382;271383;271384;271385 215348;215349;215350;215351;215352 215348 5 LRDAENESMAK Unmodified 1262.5925 0.59249998 664 O95466 FMNL1 Formin-like protein 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 11.584 11.731 3 0.00032329 10612 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 67.879 53.419 107850000 0 0 0 5008700 7839000 9642000 6711200 8914900 5779600 11665000 9295800 13711000 8876400 8638400 11769000 32293 664 29486 271386;271387;271388;271389;271390;271391;271392;271393;271394;271395;271396;271397 215353;215354;215355;215356;215357;215358;215359;215360;215361 215361 6 LRDAENESMAK Oxidation (M) 1278.5874 0.5874146 664 O95466 FMNL1 Formin-like protein 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 2 6.2622 6.4013 3 0.00030608 4599 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 76.522 57.423 65462000 0 0 0 6355000 5545600 0 6640200 3798200 5025800 7229700 11229000 0 6958800 5348500 7330900 32294 664 29486 271398;271399;271400;271401;271402;271403;271404;271405;271406;271407;271408 215362;215363;215364;215365;215366;215367;215368;215369 215366 807 8 LRDGPSAPLEAPEPR Unmodified 1603.8318 0.83181904 2247 Q13164 MAPK7 Mitogen-activated protein kinase 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.684 46.85 3 0.011767 52636 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 26.808 22.748 92201000 0 0 0 3914000 4176900 7450000 6646300 6543900 3829100 8622000 9460700 13203000 6652300 8962100 12741000 32295 2247 29487 271409;271410;271411;271412;271413;271414;271415;271416;271417;271418;271419;271420 215370;215371;215372;215373;215374 215371 4 LRDLEDSLAR Unmodified 1186.6306 0.63060004 757 P02545 LMNA Prelamin-A/C;Lamin-A/C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 1 2 2 2 2 2 2 2 2 2 2 44.378 44.614 2;3 7.8594E-06 50740 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 120.65 81.505 686670000 0 0 0 34945000 27045000 43808000 48198000 40155000 38989000 47193000 75898000 73759000 40461000 69481000 146740000 32296 757 29488 271421;271422;271423;271424;271425;271426;271427;271428;271429;271430;271431;271432;271433;271434;271435;271436;271437;271438;271439;271440;271441;271442 215375;215376;215377;215378;215379;215380;215381;215382;215383;215384;215385;215386;215387;215388;215389;215390;215391;215392;215393;215394;215395;215396;215397;215398;215399;215400;215401 215399 27 LRDLHPDLEGQLK Unmodified 1532.8311 0.83109076 4751 Q9NYU2 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes yes 0 0 1 By MS/MS By MS/MS 6 4 1 1 1 1 55.949 52.176 3 0.0011139 73010 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.814 52.273 84312000 23884000 0 0 0 0 0 0 0 0 0 0 0 0 0 60429000 32297 4751 29489 271443;271444 215402;215403 215403 2 LRDLQEAFQR Unmodified 1274.6731 0.67313356 3554 Q8WUX9 CHMP7 Charged multivesicular body protein 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 49.997 50.127 3 0.023944 56731 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 32.034 14.369 17506000 0 0 0 2112100 0 0 0 0 0 0 0 0 6538600 0 8855600 32298 3554 29490 271445;271446;271447 215404 215404 1 LRDLQQEAETYR Unmodified 1520.7583 0.75831975 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 43.285 43.463 3 0.0001016 47608 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.438 57.56 122290000 0 0 0 4013600 5703000 11019000 9571200 6860400 0 9333100 12542000 17423000 10964000 13189000 21673000 32299 2291 29491 271448;271449;271450;271451;271452;271453;271454;271455;271456;271457;271458 215405;215406;215407;215408;215409;215410;215411;215412;215413;215414;215415;215416;215417;215418 215410 13 LRDPDSHIVK Unmodified 1178.6408 0.6407708 3813 Q96EK5 KIAA1279 KIF1-binding protein yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 19.288 19.512 3 0.0059704 19316 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 49.3 27.308 103330000 0 0 0 4717200 4492200 20922000 0 5439200 0 12440000 8140600 9401900 7032300 7986400 22756000 32300 3813 29492 271459;271460;271461;271462;271463;271464;271465;271466;271467;271468 215419;215420;215421;215422;215423;215424 215423 3 LRDPSGDFSVR Unmodified 1247.6258 0.62584901 3805 Q96E14 RMI2 RecQ-mediated genome instability protein 2 yes yes 0 0 1 By MS/MS 10 0 1 1 41.457 42.2 3 0.020592 46093 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 27.676 16.143 10665000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10665000 32301 3805 29493 271469 215425 215425 1 LRDTDTLDLSGPAR Unmodified 1528.7845 0.7845345 384 O60231 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.303 49.461 3 2.1046E-05 55723 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 85.837 76.049 366720000 0 0 0 19392000 18760000 26481000 22890000 19193000 33229000 29909000 31833000 58004000 39414000 22509000 45110000 32302 384 29494 271470;271471;271472;271473;271474;271475;271476;271477;271478;271479;271480;271481 215426;215427;215428;215429;215430;215431;215432;215433;215434;215435;215436;215437;215438;215439;215440;215441;215442;215443;215444 215429 19 LRDTEEMLSK Unmodified 1220.6071 0.60708741 4390 Q9H444 CHMP4B Charged multivesicular body protein 4b yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 29.221 29.727 3 0.008362 31705 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 43.897 30.305 80391000 0 0 0 0 0 0 0 0 0 5641900 16387000 22971000 0 0 35391000 32303 4390 29495 271482;271483;271484;271485 215445;215446;215447;215448 215448 4 LRDTEEMLSK Oxidation (M) 1236.602 0.60200203 4390 Q9H444 CHMP4B Charged multivesicular body protein 4b yes yes 0 1 1 By MS/MS 2 0 1 1 19.679 16.965 3 0.010171 21557 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 62.408 48.728 4382000 0 0 4382000 0 0 0 0 0 0 0 0 0 0 0 0 32304 4390 29495 271486 215449 215449 5848 1 LRDYAQLGPR Unmodified 1187.6411 0.64110515 2183 Q12768 KIAA0196 WASH complex subunit strumpellin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 38.31 38.569 3 0.0068698 41824 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 56.404 42.198 59282000 0 0 0 0 3129100 7352100 0 4264800 3410500 7761400 4899200 3287800 6830200 8550900 9796200 32305 2183 29496 271487;271488;271489;271490;271491;271492;271493;271494;271495;271496 215450;215451;215452;215453;215454;215455;215456 215454 7 LREAEAIMGLK Unmodified 1229.6802 0.68019277 401 O60447 EVI5 Ecotropic viral integration site 5 protein homolog yes yes 0 0 1 By MS/MS 2 0 1 1 69.196 60.902 3 0.011068 81275 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.164 57.164 9674500 9674500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32306 401 29497 271497 215457 215457 1 LREANQQQQFNR Unmodified 1530.7651 0.76513646 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 17.173 16.961 3 2.9659E-08 16289 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 122.7 113.42 199560000 10200000 0 0 7909900 8539900 20673000 15245000 10917000 7493600 13660000 4206800 29721000 14072000 18014000 38907000 32307 2344 29498 271498;271499;271500;271501;271502;271503;271504;271505;271506;271507;271508;271509;271510 215458;215459;215460;215461;215462;215463;215464;215465;215466;215467;215468;215469;215470 215467 11 LREAQNDLEQVLR Unmodified 1582.8427 0.84271808 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 1 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 61.558 61.887 3 0.011829 69890 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.839 21.032 19172000 0 0 0 0 0 0 0 1861700 0 0 4860800 0 0 3900700 8549000 32308 2495 29499 271511;271512;271513;271514 215471 215471 1 LREAQSDLNK Unmodified 1172.6149 0.61494998 2816 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.14 2.47 3 25 1 1 1 2 2 3 2 2 2 3 1 2 1 3 2 11.815 11.582 2;3 0.0011931 10615 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 87.568 58.944 634690000 69736000 32414000 103420000 30426000 19238000 32389000 28559000 24120000 23123000 38722000 18792000 70149000 39211000 55803000 48586000 32309 2816 29500 271515;271516;271517;271518;271519;271520;271521;271522;271523;271524;271525;271526;271527;271528;271529;271530;271531;271532;271533;271534;271535;271536;271537;271538;271539;271540;271541;271542 215472;215473;215474;215475;215476;215477;215478;215479;215480;215481;215482;215483;215484;215485;215486;215487;215488 215480 8 LRECELSPGVNR Unmodified 1428.7143 0.71434645 4230 Q9BXP5 SRRT Serrate RNA effector molecule homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 33.21 33.593 3 0.0062416 36867 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 47.915 38.269 45293000 0 0 0 0 0 0 0 8185000 0 0 0 13246000 10923000 12939000 0 32310 4230 29501 271543;271544;271545;271546 215489;215490;215491 215490 3 LREDENAEPVGTTYQK Unmodified 1848.8854 0.88537076 2621 Q16643 DBN1 Drebrin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 2 1 1 1 1 2 2 31.016 31.136 2;3 6.3619E-07 33745 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 84.195 74.348 224780000 0 0 0 13746000 21091000 18568000 22851000 11560000 18280000 20889000 41712000 0 29793000 26286000 0 32311 2621 29502 271547;271548;271549;271550;271551;271552;271553;271554;271555;271556;271557;271558;271559 215492;215493;215494;215495;215496;215497;215498;215499;215500;215501;215502;215503;215504;215505;215506 215499 15 LREDHSQLQAECER Unmodified 1769.8115 0.81149431 5278 Q9Y6D9 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 19.068 19.338 3 3.4681E-13 19541 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 109.84 97.212 89522000 0 0 0 4008700 0 6698900 0 3409500 0 9696100 11055000 21091000 13622000 0 19941000 32312 5278 29503 271560;271561;271562;271563;271564;271565;271566;271567;271568;271569;271570 215507;215508;215509;215510;215511;215512;215513;215514;215515 215513 9 LREEIEELK Unmodified 1157.6292 0.62920306 430 O60763 USO1 General vesicular transport factor p115 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 40.123 40.305 3 0.010031 44524 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 79.986 55.133 223200000 0 0 0 12533000 11988000 26300000 16406000 15227000 8025100 0 20392000 22208000 25272000 23137000 41715000 32313 430 29504 271571;271572;271573;271574;271575;271576;271577;271578;271579;271580;271581 215516;215517;215518;215519;215520;215521;215522;215523 215519 4 LREENDIARGK Unmodified 1299.6895 0.6895119 2698 Q53EZ4 CEP55 Centrosomal protein of 55 kDa yes yes 0 0 2 By MS/MS 2 0 1 1 16.752 12.543 3 0.021683 18499 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.385 42.34 54797000 54797000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32314 2698 29505 271582 215524 215524 0 LREENLELK Unmodified 1142.6295 0.62953741 2479 Q15025 TNIP1 TNFAIP3-interacting protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 36.514 36.737 3 0.01273 40750 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 54.416 29.563 41112000 0 0 0 1858500 0 4632400 4164500 0 4030600 4515500 0 5422800 5485000 4181600 6821200 32315 2479 29506 271583;271584;271585;271586;271587;271588;271589;271590;271591 215525;215526;215527;215528 215526 4 LREGLEAGTPAAGEK Unmodified 1497.7787 0.77872084 500 O75448 MED24 Mediator of RNA polymerase II transcription subunit 24 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 30.358 30.699 3 0.0049405 31983 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.982 25.42 57120000 0 0 0 0 0 5857200 4535500 0 0 5503100 4901000 12192000 6262700 8135400 9733100 32316 500 29507 271592;271593;271594;271595;271596;271597;271598;271599 215529;215530;215531;215532;215533 215530 3 LREGQNFIFR Unmodified 1278.6833 0.68330431 5004 Q9ULT8 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 56.543 56.81 3 0.032132 64722 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 42.718 20.725 23344000 0 0 0 0 0 4447600 0 0 3934800 0 0 0 5762700 0 9199500 32317 5004 29508 271600;271601;271602;271603 215534;215535 215534 0 LREHSENFCK Unmodified 1318.6088 0.60881874 5247 Q9Y5S2 CDC42BPB Serine/threonine-protein kinase MRCK beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 6 1 1 1 1 1 1 11.382 11.576 3 0.010849 10486 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 40.727 31.998 27706000 0 0 0 0 0 5030600 0 4042100 0 3886900 0 7636900 6127300 0 982560 32318 5247 29509 271604;271605;271606;271607;271608;271609 215536;215537 215537 1 LREIEENQK Unmodified 1157.6041 0.60405094 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.45 3.11 3 1 16 1 1 2 1 1 1 1 1 1 1 1 2 2 2 2 13.078 12.609 2;3 3.4378E-05 11067 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 158.76 55.192 524570000 37263000 9606500 207570000 13702000 3926500 29404000 1043300 14115000 14762000 29785000 27832000 53665000 39603000 29839000 12451000 32319 2431 29510 271610;271611;271612;271613;271614;271615;271616;271617;271618;271619;271620;271621;271622;271623;271624;271625;271626;271627;271628;271629 215538;215539;215540;215541;215542;215543;215544;215545;215546;215547;215548 215538 5 LREIFGLYGQTTGK Unmodified 1581.8515 0.85149185 4589 Q9NR31 SAR1A GTP-binding protein SAR1a yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 15 1 2 1 2 2 2 1 1 1 2 70.561 70.709 2;3 0.02033 80250 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 31.883 16.913 197010000 0 0 0 0 2151900 23407000 6698300 15119000 21262000 14068000 11922000 17839000 3772100 0 80771000 32320 4589 29511 271630;271631;271632;271633;271634;271635;271636;271637;271638;271639;271640;271641;271642;271643;271644 215549;215550 215549 1 LREIQPCLAESR Unmodified 1470.7613 0.76129664 463 O75150 RNF40 E3 ubiquitin-protein ligase BRE1B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 44.303 44.632 3 0.00056399 49382 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 62.042 49.481 129610000 0 0 0 0 0 0 8943900 11562000 13128000 9351700 0 27443000 18766000 18407000 22010000 32321 463 29512 271645;271646;271647;271648;271649;271650;271651;271652;271653;271654 215551;215552;215553;215554;215555;215556;215557;215558;215559;215560;215561;215562;215563 215561 13 LRELDLAQEK Unmodified 1213.6667 0.6666512 178 O00750 PIK3C2B Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 41.479 41.794 3 0.0083394 45382 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.598 28.164 49687000 0 0 0 0 0 6090600 3137900 4506500 3229200 5354400 6286500 6272000 4233500 4513400 6063100 32322 178 29513 271655;271656;271657;271658;271659;271660;271661;271662;271663;271664 215564 215564 1 LRELDPSLVSANDSPSGMQTR Oxidation (M) 2288.1067 0.10667328 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 59.533 59.714 3 1.1235E-11 67701 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 78.708 73.18 119780000 0 0 0 0 9732900 13796000 13198000 0 10417000 14126000 16325000 17014000 0 12518000 12653000 32323 2804 29514 271665;271666;271667;271668;271669;271670;271671;271672;271673 215565;215566;215567;215568;215569;215570;215571 215568 4433 7 LRELDPSLVSANDSPSGMQTR Unmodified 2272.1118 0.11175865 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 66.391 66.471 3 1.1349E-11 76233 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 81.665 74.305 71693000 0 0 0 3712800 4418900 5336300 0 5806000 4817000 7146800 7225000 8573800 6352900 6358600 11945000 32324 2804 29514 271674;271675;271676;271677;271678;271679;271680;271681;271682;271683;271684 215572;215573;215574;215575;215576;215577;215578;215579;215580;215581;215582;215583;215584 215573 13 LRELEAEGYK Unmodified 1206.6245 0.62445203 4000 Q96T60 PNKP Bifunctional polynucleotide phosphatase/kinase;Polynucleotide 3'-phosphatase;Polynucleotide 5'-hydroxyl-kinase yes yes 0 0 1 By matching By MS/MS 2 0 2 1 1 37.713 33.537 3 0.013341 41875 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 59.84 26.414 21907000 0 10220000 11687000 0 0 0 0 0 0 0 0 0 0 0 0 32325 4000 29515 271685;271686 215585 215585 1 LRELGPDGEEAEGPGAGDGPPR Unmodified 2175.0192 0.019238477 1075 P18615 NELFE Negative elongation factor E yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.789 45.958 3 2.4843E-66 50651 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.475 85.348 175480000 0 0 0 14922000 7554000 14468000 9732400 10036000 7851200 15062000 16433000 20592000 16326000 13671000 28835000 32326 1075 29516 271687;271688;271689;271690;271691;271692;271693;271694;271695;271696;271697;271698 215586;215587;215588;215589;215590;215591;215592;215593;215594;215595;215596;215597 215590 12 LRELPADLAR Unmodified 1152.6615 0.66150624 3314 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 47.732 48.156 3 0.024877 54617 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 32.999 19.646 23419000 0 0 0 0 0 0 3451900 0 0 6758200 0 6381400 0 0 6827200 32327 3314 29517 271699;271700;271701;271702 215598 215598 1 LRELVAGDSAVR Unmodified 1284.715 0.71499837 3212 Q86YV9 HPS6 Hermansky-Pudlak syndrome 6 protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.65 38.829 3 0.0048817 42331 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 40.941 30.036 107410000 0 0 0 6135900 4657600 9297200 7114500 8435100 6757700 8301200 9671200 14764000 9658800 8824600 13790000 32328 3212 29518 271703;271704;271705;271706;271707;271708;271709;271710;271711;271712;271713;271714 215599;215600;215601;215602;215603;215604;215605;215606;215607 215606 9 LREMNTEAEK Unmodified 1219.5867 0.58668632 2801 Q5TKA1 LIN9 Protein lin-9 homolog yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.639 12.793 3 0.0073731 11600 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 44.614 24.852 61547000 0 0 0 4031600 3239400 5817900 4319400 5004200 3712100 5901300 5388000 6243800 5647500 4721200 7520300 32329 2801 29519 271715;271716;271717;271718;271719;271720;271721;271722;271723;271724;271725;271726 215608;215609;215610;215611;215612;215613 215611 6 LREMNTEAEK Oxidation (M) 1235.5816 0.58160094 2801 Q5TKA1 LIN9 Protein lin-9 homolog yes yes 0 1 1 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 8.93 2.72 2 13 1 1 2 1 1 1 1 1 2 1 1 2 6.3813 6.0878 3 0.0058563 3413 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.189 39.534 73273000 4173400 0 13522000 4984400 3689800 3328700 6307300 3951100 3408500 10524000 0 3448100 6990600 0 8945200 32330 2801 29519 271727;271728;271729;271730;271731;271732;271733;271734;271735;271736;271737;271738;271739;271740;271741 215614;215615;215616 215615 4431 2 LRENLADMEAK Oxidation (M) 1304.6395 0.63945017 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 26.422 22.182 3 0.010898 31715 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.776 37.967 41751000 14395000 0 27356000 0 0 0 0 0 0 0 0 0 0 0 0 32331 1286 29520 271742;271743 215617;215618;215619 215617 1895 2 LRENSASQISQLEQQLSAK Unmodified 2129.1077 0.10765955 1406;2357 P39880;Q13948 CUX1 Homeobox protein cut-like 1;Protein CASP no no 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 75.089 74.5 3 6.9444E-41 95273 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 131.25 126.49 204850000 80304000 0 0 0 0 8385700 7794400 15000000 8464300 15267000 8889500 13249000 9420800 8164200 29907000 32332 1406;2357 29521 271744;271745;271746;271747;271748;271749;271750;271751;271752;271753;271754 215620;215621;215622;215623;215624;215625;215626;215627;215628;215629;215630 215624 11 LRENVFQEHQTLK Unmodified 1640.8635 0.86345352 2399 Q14247 CTTN Src substrate cortactin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 2 2 2 2 1 1 2 40.405 40.572 3;4 6.7596E-12 44939 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 122.33 96.797 804840000 0 0 0 33767000 19793000 70025000 48024000 51678000 70744000 65486000 86747000 161270000 33637000 31157000 132520000 32333 2399 29522 271755;271756;271757;271758;271759;271760;271761;271762;271763;271764;271765;271766;271767;271768;271769;271770;271771;271772;271773;271774;271775;271776 215631;215632;215633;215634;215635;215636;215637;215638;215639;215640;215641;215642;215643;215644;215645;215646;215647;215648;215649;215650;215651 215642 12 LREQGTESR Unmodified 1074.5418 0.54178503 1446;1447 P42166;P42167 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin no no 0 0 1 By MS/MS 2 0 1 1 5.7277 3.5226 2 0.044571 5167 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 94.409 33.499 15029000 0 0 15029000 0 0 0 0 0 0 0 0 0 0 0 0 32334 1446;1447 29523 271777 215652 215652 1 LREQLQLLEEQHR Unmodified 1690.9115 0.91146635 2501 Q15149 PLEC Plectin yes yes 0 0 1 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 54.989 55.362 3 0.022773 61959 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.787 29.67 15961000 0 0 0 0 0 2247100 0 0 2054800 0 0 3676100 0 0 7983400 32335 2501 29524 271778;271779;271780;271781 215653 215653 1 LREQLSQAEAMK Oxidation (M) 1418.7188 0.71876312 4350 Q9H1H9 KIF13A Kinesin-like protein KIF13A yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 28.829 24.466 3 0.0056511 34092 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.47 45.083 42151000 38261000 0 3890100 0 0 0 0 0 0 0 0 0 0 0 0 32336 4350 29525 271782;271783 215654 215654 5813 1 LREQLSQAEAMK Unmodified 1402.7238 0.7238485 4350 Q9H1H9 KIF13A Kinesin-like protein KIF13A yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 41.732 36.059 2;3 4.5658E-13 49747 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 181.49 116.83 97802000 95980000 0 1821500 0 0 0 0 0 0 0 0 0 0 0 0 32337 4350 29525 271784;271785;271786 215655;215656 215656 1 LREQLSTSENALTGR Unmodified 1673.8697 0.86966111 1219 P27540 ARNT Aryl hydrocarbon receptor nuclear translocator yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 45.504 45.635 3 5.416E-06 49845 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.569 43.769 87463000 0 0 0 0 9316300 11295000 7868000 13812000 0 10989000 0 0 0 12206000 21976000 32338 1219 29526 271787;271788;271789;271790;271791;271792;271793 215657;215658;215659;215660;215661;215662;215663;215664 215661 8 LREQQAADAK Unmodified 1128.5887 0.58873523 3358 Q8N6H7 ARFGAP2 ADP-ribosylation factor GTPase-activating protein 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 7.0904 4.224 2 5.3073E-05 6196 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 130.53 85.454 51292000 10938000 0 40355000 0 0 0 0 0 0 0 0 0 0 0 0 32339 3358 29527 271794;271795 215665 215665 1 LREQTLSPTITSGLHNIAR Unmodified 2106.1546 0.15455017 614 O94979 SEC31A Protein transport protein Sec31A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 67.908 68.139 4 0.001544 77266 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.64 37.536 74891000 0 0 0 0 0 7800200 0 2990300 4656100 5569800 4427000 6198800 0 4100000 39149000 32340 614 29528 271796;271797;271798;271799;271800;271801;271802;271803 215666;215667;215668 215667 2 LREQYGLGPYEAVTPLTK Unmodified 2034.0786 0.078591257 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 0 1 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 76.04 76.185 3 0.0014446 87488 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.089 37.257 23206000 0 0 0 0 0 4324800 0 0 1559000 0 0 0 0 3639800 13682000 32341 2203 29529 271804;271805;271806;271807 215669;215670 215670 2 LRESEGLQEQK Unmodified 1315.6732 0.67319314 4724 Q9NXF1 TEX10 Testis-expressed sequence 10 protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 14.983 15.155 3 0.023657 13772 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 37.613 21.036 84442000 0 0 0 0 5674900 6492700 6940500 5621100 6238500 6851800 9894900 7815300 18212000 10701000 0 32342 4724 29530 271808;271809;271810;271811;271812;271813;271814;271815;271816;271817 215671 215671 1 LRESTPGDSPSTVNK Unmodified 1586.79 0.79001381 2779 Q5T6F2 UBAP2 Ubiquitin-associated protein 2 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 4 24 1 1 2 2 2 2 2 2 2 2 2 2 2 2 2 20.233 19.881 2;3 2.4064E-20 20581 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 97.268 89.757 872290000 2355200 19259000 36354000 49582000 42302000 49835000 78000000 50202000 67423000 81127000 81961000 87158000 71158000 64688000 90881000 32343 2779 29531 271818;271819;271820;271821;271822;271823;271824;271825;271826;271827;271828;271829;271830;271831;271832;271833;271834;271835;271836;271837;271838;271839;271840;271841;271842;271843;271844;271845 215672;215673;215674;215675;215676;215677;215678;215679;215680;215681;215682;215683;215684;215685;215686;215687;215688;215689;215690 215689 17 LRETLEEYNK Unmodified 1293.6565 0.65648044 1406;2357 P39880;Q13948 CUX1 Homeobox protein cut-like 1;Protein CASP no no 0 0 1 By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31.525 30.985 3 0.0018206 33638 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 80.916 73.35 317870000 36223000 0 16679000 10653000 17049000 15476000 24476000 13122000 20549000 30223000 21573000 29535000 21019000 23373000 37918000 32344 1406;2357 29532 271846;271847;271848;271849;271850;271851;271852;271853;271854;271855;271856;271857;271858;271859 215691;215692;215693;215694;215695;215696;215697;215698;215699;215700;215701;215702 215693 11 LRETLNISGPPLK Unmodified 1436.8351 0.83511351 1240 P28838 LAP3 Cytosol aminopeptidase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 66.895 65.136 3 0.0045429 73123 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.891 20.346 58666000 40324000 0 0 0 0 0 0 0 0 0 3731100 0 0 1757700 12853000 32345 1240 29533 271860;271861;271862;271863 215703;215704;215705;215706;215707 215704 4 LRETQDPTAQSLAASLSTR Unmodified 2044.0549 0.054895702 16 A3KMH1 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 66.212 66.643 3 0.0014407 76375 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 45.844 39.722 7727300 0 0 0 0 0 0 0 0 0 0 0 7727300 0 0 0 32346 16 29534 271864;271865 215708;215709 215709 1 LRETQGIEK Unmodified 1072.5877 0.58767259 426 O60716 CTNND1 Catenin delta-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 16.521 13.213 2 0.033134 16594 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 109.44 35.774 95216000 72093000 4448600 18675000 0 0 0 0 0 0 0 0 0 0 0 0 32347 426 29535 271866;271867;271868 215710 215710 1 LREVHGGGAER Unmodified 1179.6109 0.61086765 4152 Q9BTW9 TBCD Tubulin-specific chaperone D yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 6.2094 6.3178 3 0.0032835 3496 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.164 47.372 39209000 0 0 0 2267200 2562900 6601800 0 3384800 1899500 4457700 0 5094600 3261600 4408300 5270200 32348 4152 29536 271869;271870;271871;271872;271873;271874;271875;271876;271877;271878 215711;215712;215713;215714;215715 215712 5 LREVQAEIGK Unmodified 1141.6455 0.64552182 463 O75150 RNF40 E3 ubiquitin-protein ligase BRE1B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.07 3.42 7 22 3 1 3 1 1 2 2 2 2 2 2 2 2 2 2 30.529 29.536 2;3 0.00118 42370 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 119.53 70.734 906380000 256420000 21478000 33682000 20500000 20005000 36431000 39368000 48358000 34460000 66044000 71576000 66627000 61960000 51185000 78284000 32349 463 29537 271879;271880;271881;271882;271883;271884;271885;271886;271887;271888;271889;271890;271891;271892;271893;271894;271895;271896;271897;271898;271899;271900;271901;271902;271903;271904;271905;271906;271907 215716;215717;215718;215719;215720;215721;215722;215723;215724;215725;215726;215727;215728;215729;215730;215731;215732;215733;215734;215735;215736;215737 215727 19 LREVVETPLLHPER Unmodified 1686.9417 0.94170385 1369 P35998 PSMC2 26S protease regulatory subunit 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 1 2 2 2 2 2 2 2 61.021 61.121 3;4 0.0020922 71036 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 50.806 46.338 347830000 0 0 0 8930500 7623000 46884000 7824400 9972600 11458000 36555000 37783000 62857000 18360000 20955000 78624000 32350 1369 29538 271908;271909;271910;271911;271912;271913;271914;271915;271916;271917;271918;271919;271920;271921;271922;271923;271924;271925;271926;271927;271928;271929;271930 215738;215739;215740;215741;215742;215743;215744;215745;215746;215747;215748;215749;215750;215751;215752;215753;215754;215755;215756;215757 215756 15 LREYEAALNSK Unmodified 1292.6725 0.67246486 1111 P20700 LMNB1 Lamin-B1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.3 3.85 5 1 4 2 2 2 1 1 1 1 36.448 33.524 2;3 0.00076316 36861 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 63.091 52.738 296720000 233680000 12478000 17671000 9044200 0 0 0 5634800 0 0 10657000 0 0 7555100 0 32351 1111 29539 271931;271932;271933;271934;271935;271936;271937;271938;271939;271940 215758;215759;215760;215761;215762;215763;215764 215764 6 LREYLEGSNLITK Unmodified 1534.8355 0.83550744 3110 Q7Z6B7 SRGAP1 SLIT-ROBO Rho GTPase-activating protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 71.527 63.26 3 0.030655 84114 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 28.146 16.875 4636700 4636700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32352 3110 29540 271941 215765 215765 1 LRFEDTLEFVGFDAK Unmodified 1785.8938 0.8937506 2332 Q13620 CUL4B Cullin-4B yes yes 0 0 1 By MS/MS 2 0 1 1 95.068 86.938 3 0.00025654 112429 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.85 59.15 9147800 9147800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32353 2332 29541 271942 215766 215766 1 LRGDAAAGPGPGAGAGAAAEPEPR Unmodified 2115.0457 0.045727999 2872 Q6DKJ4 NXN Nucleoredoxin yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 35.682 35.951 3 2.5805E-11 38690 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 66.853 57.447 33876000 0 0 0 0 0 2345700 3627800 3870200 0 3329600 4261200 0 0 3788400 12653000 32354 2872 29542 271943;271944;271945;271946;271947;271948;271949 215767;215768;215769;215770;215771;215772 215772 6 LRGLPFGCTK Unmodified 1147.6172 0.61719858 1692 P52597 HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 2 1 1 53.051 53.26 3 0.0020139 59978 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 64.103 47.434 576930000 0 0 0 12379000 0 47219000 12001000 4858000 15688000 35102000 36014000 176160000 37621000 23895000 175990000 32355 1692 29543 271950;271951;271952;271953;271954;271955;271956;271957;271958;271959;271960;271961 215773;215774;215775;215776;215777;215778;215779;215780;215781;215782;215783;215784;215785;215786 215774 14 LRGPSGGGEEPALSQYQR Unmodified 1900.9391 0.93913766 4023 Q99567 NUP88 Nuclear pore complex protein Nup88 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 44.876 45.047 3 1.3123E-37 50286 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 127.94 121.82 564650000 0 0 0 26173000 34432000 38167000 48794000 51511000 29294000 54718000 54737000 54071000 52485000 59035000 61231000 32356 4023 29544 271962;271963;271964;271965;271966;271967;271968;271969;271970;271971;271972;271973 215787;215788;215789;215790;215791;215792;215793;215794;215795;215796;215797;215798;215799;215800;215801;215802;215803;215804;215805;215806 215794 19 LRGQPFYAVEK Unmodified 1306.7034 0.70337105 3706 Q93052 LPP Lipoma-preferred partner yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 1 1 2 1 1 2 2 2 1 2 2 45.451 45.698 2;3 0.00084662 52196 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 62.408 55.361 307500000 0 0 0 10744000 7281400 10986000 14693000 12474000 11955000 23054000 33624000 48129000 16953000 45903000 71704000 32357 3706 29545 271974;271975;271976;271977;271978;271979;271980;271981;271982;271983;271984;271985;271986;271987;271988;271989;271990;271991 215807;215808;215809;215810;215811;215812;215813;215814;215815;215816;215817;215818;215819;215820 215819 12 LRHAESVGDGER Unmodified 1324.6484 0.64837537 1284 P30533 LRPAP1 Alpha-2-macroglobulin receptor-associated protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 7.4814 7.5468 3 0.0058265 5564 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 48.659 41.289 135430000 0 0 0 1618400 2586900 2822200 2171100 0 0 0 102610000 0 0 0 23626000 32358 1284 29546 271992;271993;271994;271995;271996;271997 215821;215822 215821 2 LRHLAETAEEK Unmodified 1295.6834 0.68336389 3432 Q8NEY1 NAV1 Neuron navigator 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 14.502 14.847 3 0.002205 13820 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.452 39.913 21187000 0 0 0 0 0 0 0 0 2550500 0 0 10197000 0 0 8439200 32359 3432 29547 271998;271999;272000;272001 215823;215824;215825 215825 3 LRHLSVVTLAAK Unmodified 1306.8085 0.80850483 4863 Q9UBW8 COPS7A COP9 signalosome complex subunit 7a yes yes 0 0 1 By MS/MS 10 0 1 1 49.481 50.192 3 1.3633E-05 55745 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.892 73.026 21797000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21797000 32360 4863 29548 272002 215826 215826 1 LRHPTPTMLSIQK Oxidation (M) 1536.8446 0.84463234 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 1 1 2 2 2 2 2 1 2 39.192 39.443 3 3.7927E-07 42208 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 92.856 83.569 713940000 0 0 0 23874000 21474000 35755000 81071000 62130000 74547000 0 91494000 164770000 54214000 0 104610000 32361 213 29549 272003;272004;272005;272006;272007;272008;272009;272010;272011;272012;272013;272014;272015;272016;272017;272018 215827;215828;215829;215830;215831;215832;215833;215834;215835;215836;215837;215838;215839;215840;215841;215842 215831 287 14 LRHPTPTMLSIQK Unmodified 1520.8497 0.84971772 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 2 2 2 1 2 2 2 2 2 48.23 48.574 3;4 1.7633E-13 53267 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 112.08 105.04 692810000 0 0 0 0 0 73132000 0 38972000 59162000 34438000 54496000 149750000 51364000 61773000 169730000 32362 213 29549 272019;272020;272021;272022;272023;272024;272025;272026;272027;272028;272029;272030;272031;272032;272033;272034;272035 215843;215844;215845;215846;215847;215848;215849;215850;215851;215852;215853;215854;215855 215847 12 LRHVGSNLCLDSR Unmodified 1525.7783 0.77834369 2177 Q10471 GALNT2 Polypeptide N-acetylgalactosaminyltransferase 2;Polypeptide N-acetylgalactosaminyltransferase 2 soluble form yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By matching 10 0 5 1 1 1 1 1 34.498 34.976 3 0.019873 38767 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 35.037 21.618 61434000 0 0 0 0 0 0 0 0 13274000 0 3582500 10330000 11647000 0 22601000 32363 2177 29550 272036;272037;272038;272039;272040 215856;215857 215857 2 LRIAAENELNQSYK Unmodified 1647.858 0.8580338 282 O15397 IPO8 Importin-8 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 60.824 54.056 3 2.6276E-06 73320 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 103.76 90.643 187970000 187970000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32364 282 29551 272041;272042 215858;215859;215860;215861 215861 4 LRIEHQTITTPSK Unmodified 1522.8467 0.84674083 1425 P40938 RFC3 Replication factor C subunit 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.68 1.57 1 24 1 2 2 2 2 2 2 2 2 2 2 2 2 35.813 35.712 3;4 0.0019283 40027 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 56.569 42.486 922940000 41458000 0 0 38904000 40315000 86778000 55330000 61179000 63205000 68541000 64214000 79679000 131050000 69555000 122730000 32365 1425 29552 272043;272044;272045;272046;272047;272048;272049;272050;272051;272052;272053;272054;272055;272056;272057;272058;272059;272060;272061;272062;272063;272064;272065;272066;272067 215862;215863;215864;215865;215866;215867;215868;215869;215870;215871;215872;215873;215874;215875;215876 215876 9 LRILIEDSDQNLK Unmodified 1555.857 0.85697116 193 O14617 AP3D1 AP-3 complex subunit delta-1 yes yes 0 0 1 By MS/MS 2 0 1 1 75.964 67.833 3 0.0076833 89395 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.276 44.988 16532000 16532000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32366 193 29553 272068 215877 215877 1 LRIWDTTQK Unmodified 1159.635 0.63495714 453 O75083 WDR1 WD repeat-containing protein 1 yes yes 0 0 1 By matching By MS/MS By matching By matching By MS/MS 10 0 5 1 1 1 1 1 46.555 46.872 3 0.024292 51286 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.614 56.353 49093000 0 0 0 2330900 0 0 0 0 0 0 8432500 7138600 0 6134600 25056000 32367 453 29554 272069;272070;272071;272072;272073 215878 215878 0 LRLDPDSEIATTGVR Unmodified 1641.8686 0.86859848 3316 Q8N2W9 PIAS4 E3 SUMO-protein ligase PIAS4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 64.004 64.087 3 0.0010327 73319 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.03 42.996 90776000 0 0 0 5315800 5593400 10606000 5147700 0 5283700 8532800 8762400 10744000 8771600 8711800 13308000 32368 3316 29555 272074;272075;272076;272077;272078;272079;272080;272081;272082;272083;272084 215879;215880;215881;215882;215883;215884 215879 6 LRLDSIVIQQGR Unmodified 1396.815 0.81504677 389 O60264;P28370 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 69.598 69.778 3 0.0019741 79372 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.891 29.321 32439000 0 0 0 0 0 5333600 2659400 0 4270100 4263100 2755000 0 2665600 2812800 7679000 32369 389 29556 272085;272086;272087;272088;272089;272090;272091;272092 215885;215886;215887;215888;215889;215890;215891 215888 7 LRLNDGNEYLFQAK Unmodified 1679.8631 0.86311917 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 69.193 69.405 3 8.8337E-13 79047 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.46 83.565 28676000 0 0 0 0 0 4345500 0 0 2027500 3292700 0 3704000 0 2400200 12906000 32370 2047 29557 272093;272094;272095;272096;272097;272098 215892;215893;215894;215895;215896 215894 5 LRLQAEEVAQQK Unmodified 1411.7783 0.77832691 2501 Q15149 PLEC Plectin yes yes 0 0 1 By MS/MS By matching 10 0 2 1 1 37.878 38.623 3 0.033416 42360 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 22.075 11.465 9116900 0 0 0 0 0 0 0 0 0 0 0 6168700 0 0 2948200 32371 2501 29558 272099;272100 215897 215897 1 LRLQEEITK Unmodified 1128.6503 0.65027285 1741 P54578 USP14 Ubiquitin carboxyl-terminal hydrolase 14 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 48.141 42.265 2 0.034868 58768 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 122.28 46.217 513370000 504060000 0 9315700 0 0 0 0 0 0 0 0 0 0 0 0 32372 1741 29559 272101;272102 215898 215898 0 LRLQQQEER Unmodified 1198.6418 0.64183343 2068 Q02040 AKAP17A A-kinase anchor protein 17A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 17.175 17.404 3 0.012446 17811 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 45.022 25.669 33347000 0 0 0 3674700 0 0 3759600 3892200 0 0 5509900 5895700 6218400 4396100 0 32373 2068 29560 272103;272104;272105;272106;272107;272108;272109 215899;215900 215899 2 LRLSTDTVEHSLDNK Unmodified 1726.885 0.88497683 1459 P42575 CASP2 Caspase-2;Caspase-2 subunit p18;Caspase-2 subunit p13;Caspase-2 subunit p12 yes yes 0 0 1 By MS/MS 2 0 2 2 64.269 55.99 3;4 3.7609E-10 75486 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.69 100.1 88918000 88918000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32374 1459 29561 272110;272111 215901;215902 215901 1 LRLTPQHDQIQTQPLGK Unmodified 1972.0854 0.08540797 4553 Q9NPI6 DCP1A mRNA-decapping enzyme 1A yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 49.575 50.047 4 0.044984 55383 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 25.508 19.839 17280000 0 0 0 0 0 0 0 0 0 0 0 0 0 5984500 11295000 32375 4553 29562 272112;272113 215903 215903 1 LRLVEIAQVPK Unmodified 1264.7867 0.78670675 2638 Q16851 UGP2 UTP--glucose-1-phosphate uridylyltransferase yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 71.354 70.801 3 0.0056198 80299 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.727 38.138 87556000 9470100 0 0 0 1560400 8713600 3271500 3627500 4997100 6658100 6666900 6870100 3860800 6904800 24955000 32376 2638 29563 272114;272115;272116;272117;272118;272119;272120;272121;272122;272123;272124;272125 215904;215905;215906;215907;215908 215904 5 LRMMQEQITDK Unmodified 1391.6901 0.69010553 4514 Q9HCG8 CWC22 Pre-mRNA-splicing factor CWC22 homolog yes yes 0 0 1 By MS/MS 2 0 1 1 52.241 44.227 3 0.00036469 60968 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.548 60.954 9980600 9980600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32377 4514 29564 272126 215909 215909 1 LRNAGNEQDLGIQYK Unmodified 1717.8747 0.87474649 1340 P35221 CTNNA1 Catenin alpha-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.74 2.92 3 16 1 1 1 1 2 1 2 1 1 1 1 2 2 2 44.247 43.472 2;3 1.246E-26 47458 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 140.31 115.97 1070100000 567950000 29457000 45488000 3970800 23435000 33704000 40258000 0 28482000 45106000 45535000 43455000 38599000 44232000 80425000 32378 1340 29565 272127;272128;272129;272130;272131;272132;272133;272134;272135;272136;272137;272138;272139;272140;272141;272142;272143;272144;272145 215910;215911;215912;215913;215914;215915;215916;215917;215918;215919;215920;215921;215922;215923;215924;215925;215926;215927;215928;215929 215917 19 LRNDPLNQNK Unmodified 1210.6418 0.64183343 4832 Q9UBB5 MBD2 Methyl-CpG-binding domain protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 17.726 17.737 3 0.02966 17838 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 30.392 18.179 55950000 0 0 0 9159300 6801900 8165800 10294000 5989300 5353300 10187000 0 0 0 0 0 32379 4832 29566 272146;272147;272148;272149;272150;272151;272152 215930;215931 215931 2 LRNELQTDK Unmodified 1115.5935 0.59348625 4465 Q9H993 ARMT1 Protein-glutamate O-methyltransferase yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 17.365 13.975 2 0.0024247 20677 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 125.83 56.88 37939000 24550000 0 13389000 0 0 0 0 0 0 0 0 0 0 0 0 32380 4465 29567 272153;272154 215932;215933 215932 2 LRNEVTVLRGENASAK Unmodified 1755.9591 0.95914482 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 0 2 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 34.715 34.883 4 0.025526 36890 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 24.287 11.905 164260000 0 0 0 7967400 4024900 21512000 11686000 7755100 13829000 0 21342000 27381000 0 20409000 28357000 32381 1286 29568 272155;272156;272157;272158;272159;272160;272161;272162;272163;272164 215934;215935;215936;215937 215934 3 LRNEWASHTAALTNK Unmodified 1710.8802 0.88016622 2977 Q6UVJ0 SASS6 Spindle assembly abnormal protein 6 homolog yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 41.345 41.637 3 0.013004 45060 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.788 35.749 52727000 0 0 0 0 0 5681300 0 5098000 4313600 6401200 4120800 0 4253100 5090800 17768000 32382 2977 29569 272165;272166;272167;272168;272169;272170;272171;272172 215938;215939 215938 1 LRNIELICQENEGENDPVLQR Unmodified 2538.2496 0.24964912 2564 Q15691 MAPRE1 Microtubule-associated protein RP/EB family member 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 73.544 72.313 3 4.5565E-54 82968 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 123.6 110.15 96286000 9700100 0 0 0 0 15583000 0 0 0 13134000 0 0 4460500 8310000 45099000 32383 2564 29570 272173;272174;272175;272176;272177;272178 215940;215941;215942;215943;215944 215942 5 LRNILSVVGTDALK Unmodified 1497.8879 0.88787736 303 O43172 PRPF4 U4/U6 small nuclear ribonucleoprotein Prp4 yes yes 0 0 1 By MS/MS 10 0 1 1 80.373 80.602 3 0.0044704 92871 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.316 38.425 7932400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7932400 32384 303 29571 272179 215945 215945 1 LRNLVHSGATK Unmodified 1194.6833 0.68330431 2348 Q13867 BLMH Bleomycin hydrolase yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching 10 0 7 1 1 1 1 1 1 1 13.948 13.972 3 0.042048 13374 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 33.207 22.899 21280000 0 0 0 10516000 1629900 1189300 1365900 0 763030 1886200 0 0 3930300 0 0 32385 2348 29572 272180;272181;272182;272183;272184;272185;272186 215946 215946 1 LRNTPYQAPVR Unmodified 1313.7204 0.7204181 1600 P49790 NUP153 Nuclear pore complex protein Nup153 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 30.573 30.764 3 0.0054182 33552 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 40.727 26.718 43020000 0 0 0 0 2607700 3448100 3028800 3946800 2848700 3886400 5388100 0 6410100 4722600 6733100 32386 1600 29573 272187;272188;272189;272190;272191;272192;272193;272194;272195;272196 215947;215948;215949;215950;215951;215952 215949 6 LRPEAQPHPSAGPK Unmodified 1483.7896 0.7895603 2136 Q07157 TJP1 Tight junction protein ZO-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.096 16.269 3 0.00031892 16346 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 64.675 43.374 149070000 0 0 0 10060000 5584300 13553000 6715500 5698700 8262600 10723000 15705000 18131000 19397000 13023000 22221000 32387 2136 29574 272197;272198;272199;272200;272201;272202;272203;272204;272205;272206;272207;272208 215953;215954;215955;215956;215957;215958;215959;215960;215961;215962;215963 215957 6 LRPEAQPHPSAGPKPAESK Unmodified 1996.049 0.049022463 2136 Q07157 TJP1 Tight junction protein ZO-1 yes yes 0 0 2 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 18.982 19.019 4 0.0037204 19702 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 36.856 27.107 27121000 0 0 0 5195700 4593200 0 6277700 2902000 0 5019500 0 0 3133100 0 0 32388 2136 29575 272209;272210;272211;272212;272213;272214 215964;215965;215966;215967 215965 4 LRPEPCISLEPR Unmodified 1465.7711 0.77113304 2781 Q5T749 KPRP Keratinocyte proline-rich protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 59.076 59.142 3 0.0053767 68141 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 36.631 24.466 62514000 0 0 0 8112200 2926300 6493300 8339000 2947800 3721000 5896500 5957600 7356100 7521000 3243300 0 32389 2781 29576 272215;272216;272217;272218;272219;272220;272221;272222;272223;272224;272225 215968;215969 215969 2 LRPEPPGVQLEEK Unmodified 1490.8093 0.80929269 4099 Q9BQK8 LPIN3 Phosphatidate phosphatase LPIN3 yes yes 0 0 1 By MS/MS 2 0 1 1 59.036 50.811 3 0.0034858 69070 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.16 40.928 8053800 8053800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32390 4099 29577 272226 215970 215970 1 LRPESALAQAQK Unmodified 1310.7306 0.73064844 590 O94826 TOMM70A Mitochondrial import receptor subunit TOM70 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.401 33.586 3 0.0056225 36798 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 49.025 30.448 57345000 0 0 0 2899300 2903300 2835000 4163000 3987900 3004200 5368200 5854000 7122400 7347400 3645500 8215000 32391 590 29578 272227;272228;272229;272230;272231;272232;272233;272234;272235;272236;272237;272238 215971;215972;215973;215974;215975;215976;215977;215978;215979 215976 8 LRPGGSDMLPAQQK Unmodified 1496.7769 0.7769467 165 O00512 BCL9 B-cell CLL/lymphoma 9 protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.777 37.958 3 0.019111 40990 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 32.545 14.806 66220000 0 0 0 3639800 3948000 2635300 3807500 3910400 5498000 4769900 7412500 6141400 4963400 6249200 13244000 32392 165 29579 272239;272240;272241;272242;272243;272244;272245;272246;272247;272248;272249;272250 215980;215981;215982;215983 215981 4 LRPGSIETYEQEK Unmodified 1548.7784 0.77838649 4190 Q9BVJ7 DUSP23 Dual specificity protein phosphatase 23 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 2 2 2 2 2 2 2 2 2 2 40.608 40.765 2;3 5.4458E-10 45171 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 128.01 98.248 422010000 0 0 0 17144000 19115000 45254000 32381000 31774000 33800000 40210000 46142000 72957000 51373000 31860000 0 32393 4190 29580 272251;272252;272253;272254;272255;272256;272257;272258;272259;272260;272261;272262;272263;272264;272265;272266;272267;272268;272269;272270;272271 215984;215985;215986;215987;215988;215989;215990;215991;215992;215993;215994;215995;215996;215997;215998;215999 215990 16 LRPIYDYLDNGNNK Unmodified 1693.8424 0.84238373 2465 Q14CX7 NAA25 N-alpha-acetyltransferase 25, NatB auxiliary subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 2 2 2 1 2 1 70.865 71.078 2;3 7.6165E-15 81666 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 119.39 88.836 450770000 0 0 0 0 0 0 72729000 135310000 221510000 0 6320100 13446000 0 1458800 0 32394 2465 29581 272272;272273;272274;272275;272276;272277;272278;272279;272280;272281 216000;216001;216002;216003;216004;216005;216006;216007;216008;216009;216010;216011 216011 11 LRPLLSQLGGNSVPQPGCT Unmodified 1993.0415 0.041494244 3679 Q92888 ARHGEF1 Rho guanine nucleotide exchange factor 1 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 79.797 79.895 2 0.0013145 92071 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.324 73.779 38595000 0 0 0 0 1085600 4405500 2502200 2621200 3137400 4287900 3588800 0 2820500 3265500 10881000 32395 3679 29582 272282;272283;272284;272285;272286;272287;272288;272289;272290;272291 216012 216012 1 LRPQTYDLQESNVQLK Unmodified 1931.0112 0.011239973 3634 Q92599 SEPT8 Septin-8 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.936 59.047 3 2.6043E-10 67161 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 91.657 81.999 63196000 0 0 0 4243600 2675400 4097200 3308800 4326000 2727000 4660600 13421000 5065900 5021700 5547800 8101500 32396 3634 29583 272292;272293;272294;272295;272296;272297;272298;272299;272300;272301;272302;272303 216013;216014;216015;216016;216017;216018;216019;216020;216021 216017 7 LRPVAAEVYGTER Unmodified 1459.7783 0.77832691 764 P02788 LTF Lactotransferrin;Lactoferricin-H;Kaliocin-1;Lactoferroxin-A;Lactoferroxin-B;Lactoferroxin-C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 44.94 45.191 3 0.0083474 50563 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 31.728 26.691 45427000 0 0 0 0 0 3736500 0 0 0 27263000 5578000 0 8850100 0 0 32397 764 29584 272304;272305;272306;272307 216022;216023 216022 2 LRPVAAEVYGTERQPR Unmodified 1840.9908 0.9907793 764 P02788 LTF Lactotransferrin;Lactoferricin-H;Kaliocin-1;Lactoferroxin-A;Lactoferroxin-B;Lactoferroxin-C yes yes 0 0 2 By MS/MS 10 0 1 1 41.845 42.008 4 0.019684 46897 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 31.42 20.604 10934000 0 0 0 0 0 0 0 0 0 10934000 0 0 0 0 0 32398 764 29585 272308 216024 216024 1 LRPVSSRPQETVQAQSSR Unmodified 2025.0715 0.071548819 3323 Q8N3J3 C17orf53 Uncharacterized protein C17orf53 yes yes 0 0 2 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 26.342 26.5 4 0.0013159 27376 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 41.348 35.805 41742000 0 0 0 1889300 3100800 5319800 3973000 4093800 0 0 4708600 7559500 7104000 3993000 0 32399 3323 29586 272309;272310;272311;272312;272313;272314;272315;272316;272317 216025;216026;216027;216028 216026 3 LRPVSTQLYSTR Unmodified 1419.7834 0.78341229 3559 Q8WVB6 CHTF18 Chromosome transmission fidelity protein 18 homolog yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 44.505 45.026 3 0.000399 49129 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.279 43.096 52517000 0 0 0 0 0 0 0 0 0 0 0 4639700 15261000 9729500 22887000 32400 3559 29587 272318;272319;272320;272321 216029;216030 216030 2 LRQDFEEVTTQNEK Unmodified 1735.8377 0.83769228 2816 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.36 2.17 2 23 2 2 2 1 2 2 2 2 2 2 2 2 2 39.346 39.22 2;3 1.6611E-18 42935 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 161.1 125.15 429200000 0 0 52125000 27139000 25240000 4300800 29404000 30654000 25538000 43551000 38468000 38627000 38384000 33303000 42461000 32401 2816 29588 272322;272323;272324;272325;272326;272327;272328;272329;272330;272331;272332;272333;272334;272335;272336;272337;272338;272339;272340;272341;272342;272343;272344;272345;272346 216031;216032;216033;216034;216035;216036;216037;216038;216039;216040;216041;216042 216041 11 LRQDLQDR Unmodified 1042.552 0.55195579 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 11.879 12.028 2 0.047623 10282 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 143.91 40.346 134070000 0 0 0 6653000 7304300 7771300 8757900 5362500 6460700 12906000 7429700 20347000 15501000 15768000 19812000 32402 965 29589 272347;272348;272349;272350;272351;272352;272353;272354;272355;272356;272357;272358 216043 216043 0 LRQDLQDRTTQEEQLR Unmodified 2028.0348 0.034828962 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 2 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 2 1 2 2 33.337 33.649 3;4 0.0040899 36036 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 43.557 27.614 76066000 0 0 0 0 0 3339000 4836000 2957300 3810800 17174000 0 9190600 0 11420000 23338000 32403 965 29590 272359;272360;272361;272362;272363;272364;272365;272366;272367;272368;272369 216044;216045 216045 2 LRQEEPQSLQAAVR Unmodified 1623.8693 0.86926718 1253 P29590 PML Protein PML yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.101 42.278 3 6.4754E-12 47277 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 101.45 87.413 367900000 0 0 0 14223000 25157000 24988000 19600000 22365000 23638000 45684000 35331000 45112000 37416000 31772000 42617000 32404 1253 29591 272370;272371;272372;272373;272374;272375;272376;272377;272378;272379;272380;272381 216046;216047;216048;216049;216050;216051;216052;216053;216054;216055;216056;216057 216054 7 LRQEIYSSHNQPSTGGR Unmodified 1928.9453 0.94528567 3566 Q8WVV4 POF1B Protein POF1B yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 2 1 1 1 2 1 1 1 1 1 23.176 23.312 3;4 2.5824E-27 24946 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 131.56 120.44 151990000 0 0 0 68367000 2960800 2785500 4132600 49810000 1853600 0 4088600 9031300 5746600 3216800 0 32405 3566 29592 272382;272383;272384;272385;272386;272387;272388;272389;272390;272391;272392;272393 216058;216059;216060;216061;216062;216063;216064;216065 216064 7 LRQELDEANSTIK Unmodified 1515.7893 0.78928553 4281 Q9C0B0 UNK RING finger protein unkempt homolog yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 34.946 35.388 3 0.0039096 37700 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.351 32.408 20518000 0 0 0 0 0 0 0 0 0 4686500 0 0 0 0 15831000 32406 4281 29593 272394;272395 216066 216066 1 LRQELGICPAVK Unmodified 1382.7704 0.77040476 1224 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 51.697 50.143 3 0.0010949 54676 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.468 39.418 128260000 74273000 0 0 0 5991000 0 7288000 0 0 0 0 0 0 13630000 27079000 32407 1224 29594 272396;272397;272398;272399;272400 216067;216068;216069;216070;216071 216068 5 LRQENIELGEK Unmodified 1327.7096 0.70957864 4652 Q9NUQ3 TXLNG Gamma-taxilin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 35.795 34.686 3 0.00077709 37930 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 74.698 54.236 327290000 45227000 36831000 66168000 8254600 8577200 11635000 10971000 9224400 8414300 16650000 22935000 25226000 14248000 13565000 29361000 32408 4652 29595 272401;272402;272403;272404;272405;272406;272407;272408;272409;272410;272411;272412;272413;272414;272415;272416 216072;216073;216074;216075;216076;216077;216078;216079;216080;216081;216082 216081 9 LRQENMELAER Unmodified 1387.6878 0.68779734 1409 P40222 TXLNA Alpha-taxilin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.764 31.951 3 0.0020604 34862 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 54.343 35.597 164220000 0 0 0 8983700 9675400 11007000 8652200 10035000 9594000 15633000 19374000 23588000 12951000 10470000 24262000 32409 1409 29596 272417;272418;272419;272420;272421;272422;272423;272424;272425;272426;272427;272428 216083;216084;216085;216086;216087;216088;216089;216090;216091;216092 216084 7 LRQENMELAER Oxidation (M) 1403.6827 0.68271197 1409 P40222 TXLNA Alpha-taxilin yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 17.969 18.167 3 0.0050648 17554 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 45.257 36.658 39802000 0 0 0 0 5564200 0 4782400 4899300 0 0 10522000 14034000 0 0 0 32410 1409 29596 272429;272430;272431;272432;272433;272434 216093;216094;216095 216095 2208 2 LRQHAYEHSLGK Unmodified 1437.7477 0.74769548 421 O60664 PLIN3 Perilipin-3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 14.458 14.863 3 0.00084718 14594 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 69.352 61.301 120380000 0 0 0 0 0 0 0 0 0 0 14280000 37700000 28068000 0 40335000 32411 421 29597 272435;272436;272437;272438 216096;216097;216098 216097 3 LRQLAEEDLAQQR Unmodified 1568.8271 0.82706802 2501 Q15149 PLEC Plectin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 42.524 42.729 3 3.2661E-10 47766 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 94.688 82.996 127980000 0 0 0 15613000 8784700 0 0 12890000 10978000 0 14953000 28068000 13522000 8748000 14426000 32412 2501 29598 272439;272440;272441;272442;272443;272444;272445;272446;272447;272448 216099;216100;216101;216102;216103;216104;216105;216106;216107;216108;216109;216110 216103 12 LRQLALETIDINK Unmodified 1525.8828 0.88279198 2534 Q15428 SF3A2 Splicing factor 3A subunit 2 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 72.359 72.549 3 3.7442E-05 82751 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.171 61.132 53165000 0 0 0 0 0 10550000 4065000 0 6292500 0 6132400 4702700 3365600 5300000 12757000 32413 2534 29599 272449;272450;272451;272452;272453;272454;272455;272456 216111;216112;216113;216114;216115;216116;216117 216113 7 LRQLEEQVK Unmodified 1141.6455 0.64552182 2839 Q63ZY3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 24.677 24.666 3 0.013251 26016 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 43.185 10.976 25313000 0 0 0 0 5761300 0 7037400 7148500 5365800 0 0 0 0 0 0 32414 2839 29600 272457;272458;272459;272460 216118;216119;216120;216121 216119 1 LRQPFFQK Unmodified 1062.5974 0.59744942 2049;906 P0DME0;Q01105 SETSIP;SET Protein SETSIP;Protein SET no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.762 42.938 2 0.037714 47570 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 121.29 68.609 961650000 0 0 0 51913000 22030000 47945000 34467000 47751000 36147000 29937000 85004000 144060000 85645000 52715000 324030000 32415 906;2049 29601 272461;272462;272463;272464;272465;272466;272467;272468;272469;272470;272471;272472 216122 216122 0 LRQQDLDGELRSEK Unmodified 1685.8697 0.86966111 4010 Q99459 CDC5L Cell division cycle 5-like protein yes yes 0 0 2 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.483 35.665 4 0.0020408 39407 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.643 44.441 204810000 0 0 0 11737000 6912000 16471000 12393000 15201000 14628000 12740000 14514000 18517000 36951000 14074000 30670000 32416 4010 29602 272473;272474;272475;272476;272477;272478;272479;272480;272481;272482;272483;272484 216123;216124;216125;216126;216127;216128;216129;216130 216123 6 LRQQLEAAEK Unmodified 1184.6513 0.65133548 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.92 3.89 5 8 2 1 2 1 1 1 1 1 1 1 1 19.518 18.195 2;3 0.0052219 16721 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.194 27.182 651660000 541150000 7836600 14241000 10641000 0 0 0 7111000 0 8635100 12410000 18560000 9541300 7893800 13642000 32417 1286 29603 272485;272486;272487;272488;272489;272490;272491;272492;272493;272494;272495;272496;272497 216131;216132;216133;216134;216135;216136;216137;216138 216132 5 LRQQQLQHR Unmodified 1205.6741 0.67413661 2171 Q09472 EP300 Histone acetyltransferase p300 yes yes 0 0 1 By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 6.5291 6.5828 3 0.015549 4478 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 51.193 0 38055000 0 0 0 6794800 5858200 10272000 0 3746700 0 3143800 0 4435400 0 3804900 0 32418 2171 29604 272498;272499;272500;272501;272502;272503;272504 216139 216139 1 LRQVEELQQR Unmodified 1297.7102 0.71024735 4112 Q9BRP8 WIBG Partner of Y14 and mago yes yes 0 0 1 By MS/MS By matching 10 0 2 1 1 28.406 28.909 3 0.015014 30128 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 39.148 29.904 37349000 0 0 0 0 0 0 0 0 0 0 0 0 0 15800000 21549000 32419 4112 29605 272505;272506 216140 216140 1 LRRGDIIGVQGNPGK Unmodified 1578.8954 0.89542235 2485 Q15046 KARS Lysine--tRNA ligase yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 2 1 1 2 1 1 2 34.393 34.694 3;4 4.9994E-05 37193 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 82.529 68.057 124540000 0 0 0 2601100 0 18802000 2233900 0 0 4762400 0 26898000 12395000 8944100 47903000 32420 2485 29606 272507;272508;272509;272510;272511;272512;272513;272514;272515;272516;272517 216141;216142;216143;216144;216145 216145 4 LRRGDLPFVVPR Unmodified 1423.8412 0.84120194 1356 P35579 MYH9 Myosin-9 yes yes 0 0 2 By MS/MS 10 0 1 1 66.176 66.713 3 0.0088479 75727 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.456 57.923 9936600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9936600 32421 1356 29607 272518 216146 216146 0 LRSDDIYNQVSAYPLPEHR Unmodified 2272.1236 0.12364397 2183 Q12768 KIAA0196 WASH complex subunit strumpellin yes yes 0 0 1 By MS/MS 10 0 1 1 70.461 70.896 4 0.0042537 80922 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.625 26.976 11955000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11955000 32422 2183 29608 272519 216147 216147 1 LRSDIAVPIPK Unmodified 1207.7289 0.72885752 2153 Q08257 CRYZ Quinone oxidoreductase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 65.926 63.87 3 0.013774 86538 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.569 31.523 143880000 89750000 27624000 0 0 0 0 0 0 0 0 3797600 4573700 0 5303500 12826000 32423 2153 29609 272520;272521;272522;272523;272524;272525 216148;216149;216150;216151 216150 4 LRSEIDHVKK Unmodified 1223.6986 0.69862003 66;58;779;80 P04259;CON__P50446;CON__P02538;P02538;CON__P04259 KRT6B;KRT6A Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 6A no no 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 11.728 11.869 3 0.020135 10538 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 88.596 69.972 + 215190000 0 0 0 19660000 0 3902100 10546000 10232000 2023700 6333600 0 27117000 120890000 10315000 4166900 32424 779;80;58;66 29610 272526;272527;272528;272529;272530;272531;272532;272533;272534;272535 216152;216153;216154;216155 216154 0 LRSEIDNVK Unmodified 1072.5877 0.58767259 780 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.648 20.851 2 8.4159E-27 21366 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 178.55 93.632 + 36587000000 0 0 0 4327200000 1222500000 2364100000 1334300000 5306000000 1568100000 3468500000 3265000000 5669300000 4184200000 2229000000 1648600000 32425 780 29611 272536;272537;272538;272539;272540;272541;272542;272543;272544;272545;272546;272547 216156;216157;216158;216159;216160;216161;216162;216163;216164;216165 216162 7 LRSEIDNVKK Unmodified 1200.6826 0.68263561 780 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 no no 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 3 2 2 2 2 2 1 1 3 2 1 2 14.961 15.108 2;3 6.2403E-07 13617 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 129.89 69.291 + 31684000000 0 0 0 4091200000 988410000 698050000 1202000000 7805100000 790020000 2636900000 1898500000 6434000000 2680100000 1369600000 1089700000 32426 780 29612 272548;272549;272550;272551;272552;272553;272554;272555;272556;272557;272558;272559;272560;272561;272562;272563;272564;272565;272566;272567;272568;272569;272570 216166;216167;216168;216169;216170;216171;216172;216173;216174;216175;216176;216177;216178;216179;216180;216181;216182;216183;216184;216185;216186 216176 16 LRSGGTEGLLAEK Unmodified 1329.7252 0.72522871 4895 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 36.5 36.682 2;3 2.3408E-07 40597 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 96.734 58.739 398590000 0 0 0 23126000 21381000 27847000 35116000 32396000 25120000 31493000 32608000 46819000 43843000 33082000 45753000 32427 4895 29613 272571;272572;272573;272574;272575;272576;272577;272578;272579;272580;272581;272582;272583;272584;272585;272586;272587;272588;272589;272590;272591;272592;272593;272594 216187;216188;216189;216190;216191;216192;216193;216194;216195;216196;216197;216198;216199;216200;216201;216202;216203 216196 13 LRSINNYNPK Unmodified 1217.6517 0.65166983 5227 Q9Y5A9 YTHDF2 YTH domain-containing family protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 25.187 25.41 3 0.0092126 26679 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 39.657 30.927 51256000 0 0 0 0 2720500 0 6107300 0 3424800 6209800 5957400 0 3805700 4047700 18983000 32428 5227 29614 272595;272596;272597;272598;272599;272600;272601;272602 216204;216205;216206 216205 3 LRSPAQYQVVLSER Unmodified 1644.8948 0.89475365 2991 Q6XQN6 NAPRT Nicotinate phosphoribosyltransferase yes yes 0 0 1 By matching By matching By MS/MS 10 0 3 1 1 1 60.356 60.725 3 0.009388 68615 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.188 30.355 13329000 0 0 0 0 0 0 0 0 0 2149900 2587500 0 0 0 8591200 32429 2991 29615 272603;272604;272605 216207 216207 0 LRSQDSMSSDTAR Unmodified 1452.6627 0.66270481 1183 P25205 MCM3 DNA replication licensing factor MCM3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.408 11.524 3 0.00038722 9587 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.196 53.139 72322000 0 0 0 3223300 2357200 5634400 4627000 5767300 3030400 5934300 0 9999100 6185300 9385600 16179000 32430 1183 29616 272606;272607;272608;272609;272610;272611;272612;272613;272614;272615;272616 216208;216209;216210;216211;216212;216213;216214;216215;216216 216211 8 LRSQDSMSSDTAR Oxidation (M) 1468.6576 0.65761943 1183 P25205 MCM3 DNA replication licensing factor MCM3 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 5.8785 5.9877 3 0.00031247 2865 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 68.277 62.244 56663000 0 0 0 3803200 3189800 0 4699700 2729100 0 8462000 0 10301000 5153900 8010200 10314000 32431 1183 29616 272617;272618;272619;272620;272621;272622;272623;272624;272625 216217;216218;216219;216220;216221;216222 216220 1714 6 LRSQGCNDEYK Unmodified 1368.6092 0.60921267 2465 Q14CX7 NAA25 N-alpha-acetyltransferase 25, NatB auxiliary subunit yes yes 0 0 1 By matching By MS/MS By MS/MS By matching By matching 10 0 5 1 1 1 1 1 7.7624 7.9395 3 1.0388E-05 5896 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 134.98 130.93 140690000 0 0 0 0 0 0 35599000 48550000 49121000 2441400 4978400 0 0 0 0 32432 2465 29617 272626;272627;272628;272629;272630 216223;216224 216224 2 LRSSNADAEEK Unmodified 1218.584 0.58404378 435 O60828 PQBP1 Polyglutamine-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7 3.87 6 10 2 2 2 1 1 1 1 1 1 1 1 1 1 5.8802 4.8245 2;3 5.9409E-35 5312 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 202.65 118.15 712110000 152430000 99067000 395150000 7919400 6620900 5847700 9175400 9424500 6817600 4770100 6324900 5226500 0 3342200 0 32433 435 29618 272631;272632;272633;272634;272635;272636;272637;272638;272639;272640;272641;272642;272643;272644;272645;272646 216225;216226;216227;216228;216229;216230;216231;216232;216233;216234;216235 216233 8 LRSTNLDASENTGNK Unmodified 1618.7911 0.79107644 3601 Q8WYP5 AHCTF1 Protein ELYS yes yes 0 0 1 By MS/MS 2 0 1 1 21.283 18.48 3 0.0037087 23478 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 55.755 44.809 3488000 0 0 3488000 0 0 0 0 0 0 0 0 0 0 0 0 32434 3601 29619 272647 216236 216236 1 LRSVTTEPSSLK Unmodified 1316.73 0.72997974 2960 Q6PJT7 ZC3H14 Zinc finger CCCH domain-containing protein 14 yes yes 0 0 1 By MS/MS By matching 2 0 3 2 1 39.425 33.354 2;3 4.9368E-10 46263 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.24 57.538 92802000 85096000 7706300 0 0 0 0 0 0 0 0 0 0 0 0 0 32435 2960 29620 272648;272649;272650 216237;216238;216239 216239 3 LRTAGPLESSETEEASQLK Unmodified 2045.0277 0.027677899 4817 Q9P2E9 RRBP1 Ribosome-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 58.957 52.91 3 0.00010647 66136 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 72.09 66.881 20735000 8881400 0 11853000 0 0 0 0 0 0 0 0 0 0 0 0 32436 4817 29621 272651;272652 216240 216240 0 LRTANEIYEK Unmodified 1235.651 0.65100113 2835 Q5W0B1 RNF219 RING finger protein 219 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 25.869 26.175 3 0.045048 26863 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 35.33 21.072 37142000 0 0 0 0 0 3945500 0 3518200 5626700 0 4634700 0 5819700 6753400 6844000 32437 2835 29622 272653;272654;272655;272656;272657;272658;272659 216241 216241 1 LRTDAVLPLTVAEVQK Unmodified 1752.0145 0.014534437 2285 Q13421 MSLN Mesothelin;Megakaryocyte-potentiating factor;Mesothelin, cleaved form yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.04 2.6 3 22 1 1 1 1 1 2 2 2 2 2 2 2 2 2 2 79.584 79.055 2;3 1.2112E-20 91171 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 112.34 105.05 697210000 118300000 13120000 8932000 10181000 21162000 42454000 27345000 40939000 36037000 57174000 53530000 80090000 39976000 45048000 102920000 32438 2285 29623 272660;272661;272662;272663;272664;272665;272666;272667;272668;272669;272670;272671;272672;272673;272674;272675;272676;272677;272678;272679;272680;272681;272682;272683;272684 216242;216243;216244;216245;216246;216247;216248;216249;216250;216251;216252;216253;216254;216255;216256;216257;216258;216259 216245 15 LRTEQNERQK Unmodified 1300.6848 0.68476088 3151 Q86UP2 KTN1 Kinectin yes yes 0 0 2 By MS/MS 2 0 1 1 5.6818 2.3043 3 0.018961 5171 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.781 51.307 54245000 54245000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32439 3151 29624 272685 216260 216260 1 LRTETQNALK Unmodified 1172.6513 0.65133548 1498 P46100 ATRX Transcriptional regulator ATRX yes yes 0 0 1 By MS/MS By MS/MS 6 4 1 1 1 1 22.535 17.639 3 0.00036453 25390 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 100.48 72.272 52747000 52747000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32440 1498 29625 272686;272687 216261;216262 216262 2 LRTFYEK Unmodified 955.51272 0.51271674 1909 P62753 RPS6 40S ribosomal protein S6 yes yes 0 0 1 By MS/MS 2 0 1 1 37.553 31.056 2 0.04278 43352 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 130.22 87.155 113780000 113780000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32441 1909 29626 272688 216263 216263 0 LRTHSIESSGK Unmodified 1213.6415 0.64149908 1491 P45985 MAP2K4 Dual specificity mitogen-activated protein kinase kinase 4 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.0918 7.2154 3 0.0016856 4928 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 67.385 54.429 70189000 0 0 0 4120100 2103500 5082200 6320900 5153700 4005700 5664200 10382000 6650400 7971800 4972200 7763000 32442 1491 29627 272689;272690;272691;272692;272693;272694;272695;272696;272697;272698;272699;272700 216264;216265;216266;216267 216266 4 LRTNLQPLESTQSQDF Unmodified 1875.9327 0.9326553 5082 Q9Y248 GINS2 DNA replication complex GINS protein PSF2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 76.574 71.085 2 1.3186E-22 91909 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 124.48 108.39 216410000 188390000 0 28018000 0 0 0 0 0 0 0 0 0 0 0 0 32443 5082 29628 272701;272702 216268;216269 216268 1 LRVLDPEVTQQTIELK Unmodified 1881.0571 0.057127533 3270 Q8IY31 IFT20 Intraflagellar transport protein 20 homolog yes yes 0 0 1 By MS/MS 2 0 1 1 83.569 75.439 3 4.0522E-08 98611 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 103.6 98.286 15019000 15019000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32444 3270 29629 272703 216270 216270 1 LRVLELNASDER Unmodified 1413.7576 0.75759147 1347 P35249 RFC4 Replication factor C subunit 4 yes yes 0 0 1 By matching By matching By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 56.077 56.433 3 0.0036649 64478 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 43.761 29.677 53526000 0 0 0 0 0 0 0 6763200 9705700 0 0 10155000 9941400 0 16960000 32445 1347 29630 272704;272705;272706;272707;272708 216271;216272 216272 2 LRYANNSNYK Unmodified 1241.6153 0.61528433 3734;1846 Q96A72;P61326 MAGOHB;MAGOH Protein mago nashi homolog 2;Protein mago nashi homolog no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 16.202 15.957 3 0.011038 14460 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.835 36.665 104250000 30241000 0 0 0 1974100 2250700 0 3789500 3035900 4708800 9938400 9526100 5281100 10468000 23038000 32446 3734;1846 29631 272709;272710;272711;272712;272713;272714;272715;272716;272717;272718;272719 216273;216274;216275;216276 216273 4 LRYEEAEVRK Unmodified 1291.6884 0.68844927 1420 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 yes yes 0 0 2 By MS/MS By MS/MS By matching By MS/MS 8 3.46 1 3 1 1 1 1 22.128 20.979 3 0.029268 31789 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.595 28.193 110100000 45368000 0 0 0 0 5211500 0 0 0 0 0 0 20608000 0 38908000 32447 1420 29632 272720;272721;272722;272723 216277;216278 216278 1 LRYEIDTGEETK Unmodified 1452.7096 0.70963822 2175 Q0VDF9 HSPA14 Heat shock 70 kDa protein 14 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.5 3.55 1 1 4 1 1 1 1 1 1 41.319 39.99 3 3.1724E-07 50439 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 116.24 93.32 72327000 0 5008300 46296000 0 2169800 0 5996200 0 0 0 0 0 0 4814900 8041100 32448 2175 29633 272724;272725;272726;272727;272728;272729 216279;216280;216281;216282 216282 4 LRYPINEEALEK Unmodified 1473.7827 0.78274359 1083 P19174 PLCG1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 66.001 59.217 2;3 5.4795E-12 79334 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 122.51 86.999 173600000 166060000 0 7547200 0 0 0 0 0 0 0 0 0 0 0 0 32449 1083 29634 272730;272731;272732 216283;216284;216285;216286 216283 4 LRYTEEGK Unmodified 994.50836 0.50835964 1587 P49711 CTCF Transcriptional repressor CTCF yes yes 0 0 1 By MS/MS 2 0 1 1 15.055 11.006 2 0.015288 16340 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 122.44 76.42 41147000 41147000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32450 1587 29635 272733 216287 216287 1 LSAAEDPLVQSLR Unmodified 1397.7514 0.75144346 1539 P48449 LSS Lanosterol synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.125 74.186 2 6.7165E-08 85481 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 99.752 62.196 58190000 0 0 0 4599000 5081400 3734300 3874300 6455700 3294700 5107500 5555200 7043400 4598800 4264300 4581700 32451 1539 29636 272734;272735;272736;272737;272738;272739;272740;272741;272742;272743;272744;272745 216288;216289;216290;216291;216292;216293;216294;216295;216296;216297;216298 216296 11 LSAAEEIQGDGPK Unmodified 1313.6463 0.64630969 3133 Q86TB9 PATL1 Protein PAT1 homolog 1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.026 41.205 2 3.7653E-90 45673 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 237.93 187.89 465400000 0 0 0 15340000 20445000 68453000 29695000 30906000 39019000 42779000 40018000 52061000 46361000 38985000 41341000 32452 3133 29637 272746;272747;272748;272749;272750;272751;272752;272753;272754;272755;272756;272757 216299;216300;216301;216302;216303;216304;216305;216306;216307;216308 216303 9 LSAAEEIQGDGPKK Unmodified 1441.7413 0.7412727 3133 Q86TB9 PATL1 Protein PAT1 homolog 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.12 2.45 2 1 23 3 2 2 2 2 2 2 2 1 2 2 2 2 33.012 32.612 2;3 3.8736E-18 35534 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 139.31 106.56 691840000 0 54887000 0 45991000 58862000 26174000 76325000 70268000 29451000 47290000 12655000 83242000 81908000 55649000 49140000 32453 3133 29638 272758;272759;272760;272761;272762;272763;272764;272765;272766;272767;272768;272769;272770;272771;272772;272773;272774;272775;272776;272777;272778;272779;272780;272781;272782;272783 216309;216310;216311;216312;216313;216314;216315;216316;216317;216318;216319;216320;216321;216322;216323;216324;216325;216326;216327;216328;216329;216330;216331;216332 216323 20 LSAAIVLK Unmodified 813.53239 0.53238955 3548 Q8WUM0 NUP133 Nuclear pore complex protein Nup133 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 67.288 61.302 2 0.026665 78705 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.116 34.585 44916000 31237000 9905400 3772900 0 0 0 0 0 0 0 0 0 0 0 0 32454 3548 29639 272784;272785;272786 216333;216334;216335 216334 3 LSAALSSLQR Unmodified 1044.5928 0.59275797 4801 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 51.62 51.84 2 0.0063186 58343 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 65.404 38.948 140130000 0 0 0 0 9819400 10208000 10425000 9398800 9626400 15220000 17278000 18051000 15343000 11588000 13172000 32455 4801 29640 272787;272788;272789;272790;272791;272792;272793;272794;272795;272796;272797 216336;216337;216338;216339;216340;216341;216342;216343;216344;216345 216339 9 LSAASGYSDVTDSK Unmodified 1399.6467 0.64670362 2339 Q13670 PMS2P11 Putative postmeiotic segregation increased 2-like protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 39.561 37.559 2 7.7306E-41 42808 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 199.43 169.18 142850000 0 10831000 0 45904000 86112000 0 0 0 0 0 0 0 0 0 0 32456 2339 29641 272798;272799;272800 216346;216347 216347 2 LSAASTWLEDEGVGATTVMLK Oxidation (M) 2194.0827 0.082749937 5206 Q9Y4L1 HYOU1 Hypoxia up-regulated protein 1 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 89.024 85.359 2 4.4689E-128 105994 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 201.72 188.96 66912000 0 63118000 3793800 0 0 0 0 0 0 0 0 0 0 0 0 32457 5206 29642 272801;272802 216348 216348 6605 1 LSAASTWLEDEGVGATTVMLK Unmodified 2178.0878 0.087835314 5206 Q9Y4L1 HYOU1 Hypoxia up-regulated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 3 1 94.374 89.657 2;3 8.5324E-10 112406 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.45 92.477 216190000 9002400 202490000 4699200 0 0 0 0 0 0 0 0 0 0 0 0 32458 5206 29642 272803;272804;272805;272806;272807 216349;216350;216351;216352;216353 216350 3 LSAAVEVGDAAEVK Unmodified 1357.7089 0.70890994 2142 Q07864 POLE DNA polymerase epsilon catalytic subunit A yes yes 0 0 0 By MS/MS 2 0 1 1 62.167 56.273 2 4.1694E-18 72204 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.31 106.42 17180000 0 17180000 0 0 0 0 0 0 0 0 0 0 0 0 0 32459 2142 29643 272808 216354 216354 1 LSAAVTEAFVR Unmodified 1162.6346 0.63462279 1210 P26640 VARS Valine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.511 70.584 2 0.00025461 81240 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 123.86 50.6 181590000 0 0 0 4280100 7357300 23487000 9346500 7715400 7650800 19745000 18649000 17582000 9920700 15071000 40790000 32460 1210 29644 272809;272810;272811;272812;272813;272814;272815;272816;272817;272818;272819;272820 216355;216356;216357;216358;216359;216360;216361;216362;216363;216364 216360 8 LSADTYEDLK Unmodified 1153.5503 0.55028404 3269 Q8IY22 CMIP C-Maf-inducing protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 49.021 47.8 2 0.0077209 54220 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 61.78 32.618 86718000 0 54590000 0 6055500 6887700 9141100 0 0 0 0 0 10044000 0 0 0 32461 3269 29645 272821;272822;272823;272824;272825;272826 216365;216366;216367;216368;216369;216370 216365 4 LSAEAAEK Unmodified 817.41815 0.41814765 1333 P33992 MCM5 DNA replication licensing factor MCM5 yes yes 0 0 0 By MS/MS 10 0 1 1 9.1065 9.5122 2 0.0095736 7788 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 82.452 40.224 11822000 0 0 0 0 0 0 0 0 0 0 11822000 0 0 0 0 32462 1333 29646 272827 216371 216371 1 LSAEAVFEK Unmodified 992.51786 0.51786169 3137 Q86TP1 PRUNE Protein prune homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 54.925 55.046 2 0.0095982 62492 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.27 17.709 48144000 0 0 0 0 2959600 7183400 4120200 4548800 4311500 7476000 0 0 0 5417800 12127000 32463 3137 29647 272828;272829;272830;272831;272832;272833;272834;272835;272836 216372;216373;216374;216375;216376;216377 216372 6 LSAEEAVQK Unmodified 973.50803 0.50802529 3009 Q6ZS30 NBEAL1 Neurobeachin-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 43.082 42.553 2 0.010149 48025 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 64.757 11.182 32090000 0 0 0 32090000 0 0 0 0 0 0 0 0 0 0 0 32464 3009 29648 272837;272838 216378;216379 216379 2 LSAEENPDDSEVPSSSGINSTK Unmodified 2262.0135 0.013543977 5245 Q9Y5Q9 GTF3C3 General transcription factor 3C polypeptide 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 2 2 2 1 2 2 2 2 2 2 2 47.009 47.209 2;3 2.1721E-86 52219 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 195.6 177.91 267790000 0 0 0 9615500 20326000 23814000 16000000 9151100 13447000 25148000 34633000 25072000 33500000 18955000 38131000 32465 5245 29649 272839;272840;272841;272842;272843;272844;272845;272846;272847;272848;272849;272850;272851;272852;272853;272854;272855;272856;272857;272858;272859;272860 216380;216381;216382;216383;216384;216385;216386;216387;216388;216389;216390;216391;216392 216383 13 LSAEEQAK Unmodified 874.43961 0.43961137 3994 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 2 1 1 1 1 1 1 2 7.6819 7.8091 2 0.0081134 5391 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.323 37.997 59419000 0 0 0 2928200 3264500 5208900 6082700 5402100 4982700 4572400 7945500 5206900 4713300 0 9112000 32466 3994 29650 272861;272862;272863;272864;272865;272866;272867;272868;272869;272870;272871;272872;272873 216393;216394;216395;216396;216397;216398;216399;216400;216401 216396 9 LSAEERDQLLPNLR Unmodified 1652.8846 0.8845829 1849 P61457 PCBD1 Pterin-4-alpha-carbinolamine dehydratase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 67.021 67.381 3 0.00040454 76468 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 65.805 50.817 63090000 0 0 0 0 0 0 0 0 0 0 10735000 7636300 0 7218600 37500000 32467 1849 29651 272874;272875;272876;272877 216402;216403;216404;216405;216406;216407 216406 6 LSAFAFK Unmodified 782.43268 0.4326755 535 O75717 WDHD1 WD repeat and HMG-box DNA-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.411 61.512 2 0.043924 69326 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 67.035 42.848 148580000 0 0 0 7398300 6699700 12308000 11370000 8560400 10776000 15815000 17221000 13591000 12469000 13524000 18849000 32468 535 29652 272878;272879;272880;272881;272882;272883;272884;272885;272886;272887;272888;272889 216408 216408 1 LSAFGQIYK Unmodified 1025.5546 0.55458155 3991 Q96SI9 STRBP Spermatid perinuclear RNA-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 62.687 62.854 2 0.0099506 71784 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 65.252 19.37 57488000 0 0 0 0 3163500 3526900 3335900 4436500 4775800 5639000 6508600 6627500 5671700 4388100 9414900 32469 3991 29653 272890;272891;272892;272893;272894;272895;272896;272897;272898;272899;272900 216409;216410;216411;216412;216413;216414;216415;216416;216417;216418;216419 216410 11 LSAGESISLDEFK Unmodified 1394.6929 0.69292553 3288 Q8IYU8 MICU2 Calcium uptake protein 2, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 80.276 75.564 2 0.00053843 94120 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.82 70.831 43616000 0 43616000 0 0 0 0 0 0 0 0 0 0 0 0 0 32470 3288 29654 272901 216420 216420 1 LSAHVDDSGSQSR Unmodified 1357.6222 0.6222202 2823 Q5VW36 FOCAD Focadhesin yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.414 13.57 3 0.03973 12803 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 38.995 30.891 123850000 0 0 0 7858000 12457000 15049000 8979300 9592200 8244100 14770000 11700000 12439000 6970700 6646900 9145100 32471 2823 29655 272902;272903;272904;272905;272906;272907;272908;272909;272910;272911;272912;272913 216421 216421 0 LSALFSSSQK Unmodified 1066.5659 0.56587452 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 49.164 49.307 2 0.032754 55874 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 42.312 22.174 22983000 0 0 0 0 0 0 11187000 0 0 0 0 0 0 11797000 0 32472 2446 29656 272914;272915 216422 216422 1 LSALLFK Unmodified 790.49528 0.49527576 2195 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.53 1.88 1 16 1 2 1 2 1 2 1 1 2 2 2 71.091 70.726 2 0.023406 80398 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 86.866 0 173840000 16748000 0 0 0 15705000 9361700 17611000 10753000 0 20467000 6395000 17079000 18901000 19717000 21104000 32473 2195 29657 272916;272917;272918;272919;272920;272921;272922;272923;272924;272925;272926;272927;272928;272929;272930;272931;272932 216423;216424;216425;216426;216427;216428;216429;216430;216431;216432;216433;216434 216434 12 LSALLQETK Unmodified 1001.5757 0.57571092 430 O60763 USO1 General vesicular transport factor p115 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 46.787 47.016 2 2.4622E-05 51695 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 144.12 92.692 215940000 0 0 0 9794100 0 25977000 13858000 14484000 11817000 25298000 25250000 15848000 25471000 16218000 31920000 32474 430 29658 272933;272934;272935;272936;272937;272938;272939;272940;272941;272942;272943 216435;216436;216437;216438;216439;216440 216437 1 LSALNEALALDK Unmodified 1256.6976 0.69761697 4179 Q9BV73 CEP250 Centrosome-associated protein CEP250 yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 81.573 77.956 2 7.5587E-13 96955 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.16 73.695 44416000 0 40763000 3652900 0 0 0 0 0 0 0 0 0 0 0 0 32475 4179 29659 272944;272945 216441 216441 1 LSAMLVPVTPEVKPK Unmodified 1607.9321 0.93205036 2003 P82970 HMGN5 High mobility group nucleosome-binding domain-containing protein 5 yes yes 0 0 1 By MS/MS 10 0 1 1 75.269 75.58 3 0.035249 86755 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 27.938 21.357 7433400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7433400 32476 2003 29660 272946 216442 216442 1 LSAMLVPVTPEVKPK Oxidation (M) 1623.927 0.92696498 2003 P82970 HMGN5 High mobility group nucleosome-binding domain-containing protein 5 yes yes 0 1 1 By matching By MS/MS 10 0 2 1 1 67.985 68.224 3 0.00077308 78303 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 48.351 38.207 6430400 0 0 0 0 0 0 0 1273600 0 0 5156700 0 0 0 0 32477 2003 29660 272947;272948 216443 216443 3250 1 LSAMMGAVAEK Oxidation (M) 1122.5413 0.54131603 3141 Q86U44 METTL3 N6-adenosine-methyltransferase 70 kDa subunit yes yes 0 1 0 By MS/MS 2 0 1 1 38.114 33.147 2 0.0042906 43317 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.533 9.5525 13184000 0 13184000 0 0 0 0 0 0 0 0 0 0 0 0 0 32478 3141 29661 272949 216444 216444 4766 1 LSANQQNILK Unmodified 1127.6299 0.62987176 1793 P57088 TMEM33 Transmembrane protein 33 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.47 2 1 14 1 1 1 1 1 1 1 1 1 2 1 1 2 38.971 38.862 2 0.00050402 43152 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 134.48 96.318 2265700000 0 20776000 0 12445000 14100000 17391000 11917000 13499000 10177000 15184000 16603000 1401800000 13537000 12537000 705720000 32479 1793 29662 272950;272951;272952;272953;272954;272955;272956;272957;272958;272959;272960;272961;272962;272963;272964 216445;216446;216447;216448;216449;216450;216451;216452;216453;216454;216455;216456;216457;216458 216449 14 LSAPVTYTK Unmodified 978.5386 0.53859714 5289 Q9Y6M0 PRSS21 Testisin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 40.853 40.291 2 0.0047986 44796 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 85.666 12.342 191810000 0 38813000 0 8104000 9381500 11610000 9898800 9694200 11005000 16215000 17238000 18643000 13741000 11945000 15523000 32480 5289 29663 272965;272966;272967;272968;272969;272970;272971;272972;272973;272974;272975;272976;272977;272978 216459;216460;216461;216462;216463;216464;216465;216466;216467;216468;216469;216470;216471 216465 13 LSAQAQVAEDILDK Unmodified 1499.7831 0.78313752 2463 Q14C86 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 77.139 77.193 2 2.5813E-12 89070 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 123.84 106.4 84329000 0 0 0 0 6586000 12881000 9068100 7692900 10180000 27417000 0 0 10504000 0 0 32481 2463 29664 272979;272980;272981;272982;272983;272984;272985 216472;216473;216474;216475;216476;216477;216478 216473 7 LSASETSLHR Unmodified 1099.5622 0.56218613 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 0 By MS/MS 10 0 1 1 21.73 22.382 2 0.0065358 22463 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.654 26.332 8838300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8838300 32482 2495 29665 272986 216479 216479 1 LSASGEDSTIPQASR Unmodified 1517.7322 0.73216458 1430 P41182 BCL6 B-cell lymphoma 6 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 36.859 37.19 2 2.0534E-06 40053 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.289 40.777 48473000 0 0 0 0 0 3997100 2705000 2514800 0 5222300 5661200 10950000 4596100 2581700 10245000 32483 1430 29666 272987;272988;272989;272990;272991;272992;272993;272994;272995;272996;272997 216480;216481;216482;216483;216484;216485;216486;216487;216488;216489;216490 216484 11 LSASNQDK Unmodified 861.41921 0.41921028 3453 Q8NG31 CASC5 Protein CASC5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 10.367 10.493 2 0.022922 9191 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 60.76 7.2056 5638700000 0 0 0 1937100000 276080000 0 601700000 1148500000 0 0 754040000 0 0 475000000 446180000 32484 3453 29667 272998;272999;273000;273001;273002;273003;273004 216491;216492;216493;216494;216495;216496;216497;216498 216495 8 LSASSSISSADLFEEPR Unmodified 1794.8636 0.86357268 4534 Q9NP61 ARFGAP3 ADP-ribosylation factor GTPase-activating protein 3 yes yes 0 0 0 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 77.402 77.469 2 0.035504 89586 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 28.203 16.884 17973000 0 0 0 0 3817600 0 0 2689200 0 0 4495800 6970900 0 0 0 32485 4534 29668 273005;273006;273007;273008 216499 216499 1 LSASSSISSADLFEEPRK Unmodified 1922.9585 0.9585357 4534 Q9NP61 ARFGAP3 ADP-ribosylation factor GTPase-activating protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.125 70.2 3 7.989E-40 80766 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 115.15 101.11 231480000 0 0 0 4761100 8485800 28073000 10333000 16793000 16868000 20943000 25364000 23904000 18030000 14940000 42984000 32486 4534 29669 273009;273010;273011;273012;273013;273014;273015;273016;273017;273018;273019;273020 216500;216501;216502;216503;216504;216505;216506;216507;216508;216509;216510;216511;216512;216513;216514 216505 15 LSASTASELSPK Unmodified 1189.619 0.6190323 2667 Q3KQU3 MAP7D1 MAP7 domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 40.796 41.033 2 1.2229E-05 45670 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 107.83 48.586 60747000 0 0 0 0 5315800 5616200 4832100 5766300 2889900 7830700 7174100 9934100 4408700 0 6979500 32487 2667 29670 273021;273022;273023;273024;273025;273026;273027;273028;273029;273030;273031 216515;216516;216517;216518;216519;216520;216521;216522;216523;216524;216525 216518 11 LSATESIVEIVK Unmodified 1287.7286 0.72858275 329 O43432 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 80.315 79.797 2 0.0022534 92234 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 63.624 32.202 58252000 0 27343000 1275000 0 2091800 2538900 1927200 2002700 2677200 4330200 2916800 4001700 2084000 0 5063800 32488 329 29671 273032;273033;273034;273035;273036;273037;273038;273039;273040;273041;273042;273043 216526;216527;216528;216529;216530 216526 5 LSAVLEDTENWLYEDGEDQPK Unmodified 2450.1125 0.11252974 686 O95757 HSPA4L Heat shock 70 kDa protein 4L yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 3 1 91.45 86.725 2;3 1.537E-48 108568 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 176.4 154.08 107120000 22738000 81165000 3220700 0 0 0 0 0 0 0 0 0 0 0 0 32489 686 29672 273044;273045;273046;273047;273048 216531;216532;216533;216534;216535;216536 216531 6 LSCDTRPLILK Unmodified 1314.733 0.73295662 2823 Q5VW36 FOCAD Focadhesin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 52.654 52.088 3 0.0021101 59553 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 64.64 42.166 170700000 10783000 0 0 8994700 17618000 20028000 11733000 14644000 9682500 13753000 16008000 21035000 0 11266000 15153000 32490 2823 29673 273049;273050;273051;273052;273053;273054;273055;273056;273057;273058;273059;273060 216537;216538;216539;216540;216541;216542;216543;216544;216545;216546;216547;216548;216549;216550;216551;216552 216551 16 LSCFAQTVSPAEK Unmodified 1436.697 0.69696505 2626 Q16658 FSCN1 Fascin yes yes 0 0 0 By MS/MS 10 0 1 1 49.766 50.477 2 5.8763E-09 56030 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 111.33 94.682 48128000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48128000 32491 2626 29674 273061 216553;216554 216553 2 LSCLFAGPHSTLTPPCSPPEDGLCPH Unmodified 2846.2826 0.28260551 5253 Q9Y5X2 SNX8 Sorting nexin-8 yes yes 0 0 0 By MS/MS 2 0 1 1 86.765 78.634 3 5.6615E-06 102496 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.136 58.148 12243000 12243000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32492 5253 29675 273062 216555;216556 216555 2 LSCLPAFK Unmodified 934.49462 0.49462383 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.963 62.063 2 0.0068946 69956 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 91.906 65.304 198310000 0 0 0 8231600 8181300 13797000 9356000 9113800 15088000 17432000 16753000 29712000 20952000 19063000 30629000 32493 2392 29676 273063;273064;273065;273066;273067;273068;273069;273070;273071;273072;273073;273074 216557;216558;216559;216560;216561;216562;216563;216564;216565;216566;216567;216568 216564 12 LSCMANSVIK Unmodified 1121.5573 0.55730044 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 48.583 46.782 2 0.011018 52918 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 54.982 30.059 99261000 12334000 52890000 0 5671300 4682100 6309000 0 5793300 4143500 7437700 0 0 0 0 0 32494 2804 29677 273075;273076;273077;273078;273079;273080;273081;273082 216569;216570;216571;216572;216573;216574;216575;216576 216569 8 LSCMANSVIK Oxidation (M) 1137.5522 0.55221507 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 32.789 32.388 2 0.005686 41655 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.645 48.556 49057000 0 24963000 0 2404400 2641900 0 3425500 2335300 0 2710000 0 4103100 0 2196700 4276800 32495 2804 29677 273083;273084;273085;273086;273087;273088;273089;273090;273091 216577;216578;216579 216577 4434 3 LSCTILEIPYQK Unmodified 1463.7694 0.76940171 3236 Q8IW75 SERPINA12 Serpin A12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 80.614 80.629 2 2.5241E-05 93477 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 121.73 91.989 31668000 0 0 0 10960000 2601800 0 2392700 4867600 0 3260400 0 3829500 1772900 1983300 0 32496 3236 29678 273092;273093;273094;273095;273096;273097;273098;273099 216580;216581 216581 2 LSCVPVLIFANK Unmodified 1359.7584 0.75844309 1371 P36405 ARL3 ADP-ribosylation factor-like protein 3 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 90.834 86.844 2 0.0045583 101637 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.216 27.859 26951000 21904000 0 0 0 0 0 0 0 0 0 0 0 0 0 5047100 32497 1371 29679 273100;273101 216582;216583 216582 2 LSDADLAGPLQK Unmodified 1226.6507 0.65066678 2476 Q15021 NCAPD2 Condensin complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 59.499 58.063 2 8.5342E-18 73817 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 155.42 114.43 802180000 14858000 595660000 3526900 11220000 8309800 19734000 10766000 0 8927900 20220000 17096000 24070000 19289000 20200000 28302000 32498 2476 29680 273102;273103;273104;273105;273106;273107;273108;273109;273110;273111;273112;273113;273114;273115;273116 216584;216585;216586;216587;216588;216589;216590;216591;216592;216593;216594;216595;216596;216597;216598;216599;216600;216601;216602;216603 216588 19 LSDASHLSK Unmodified 956.49271 0.49270958 240 O15014 ZNF609 Zinc finger protein 609 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 6 4 3 3 1 1 1 1 1 1 11.484 9.9934 2 0.0091325 13099 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.177 49.385 85878000 59774000 10523000 1878400 0 652530 0 0 0 0 0 10644000 2407100 0 0 0 32499 240 29681 273117;273118;273119;273120;273121;273122 216604;216605 216604 2 LSDCESTDVK Unmodified 1152.4969 0.49686826 3078 Q7Z333 SETX Probable helicase senataxin yes yes 0 0 0 By MS/MS 10 0 1 1 15.446 15.681 2 0.036838 15473 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 56.013 42.976 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32500 3078 29682 273123 216606 216606 1 LSDDNTIGK Unmodified 961.47164 0.47163978 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16.596 16.178 2 0.0073021 19026 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.64 59.991 300250000 26915000 127210000 0 6133800 4012400 15183000 7008300 5441700 7041700 14264000 14478000 14662000 12181000 16651000 29066000 32501 2344 29683 273124;273125;273126;273127;273128;273129;273130;273131;273132;273133;273134;273135;273136;273137 216607;216608;216609;216610 216607 4 LSDDPCPVESK Unmodified 1245.5547 0.55471749 387 O60244 MED14 Mediator of RNA polymerase II transcription subunit 14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 27.3 27.383 2 0.013168 29402 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 46.819 31.668 27258000 0 0 0 3781500 3654600 4272600 3856200 3184600 0 0 0 4392800 0 4115300 0 32502 387 29684 273138;273139;273140;273141;273142;273143;273144 216611;216612;216613 216611 3 LSDEEVDEMIR Unmodified 1334.6024 0.60239596 1218 P27482 CALML3 Calmodulin-like protein 3 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 66.129 65.876 2 0.0039369 76198 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 77.192 69.546 14297000 0 0 0 8514400 0 0 0 5782900 0 0 0 0 0 0 0 32503 1218 29685 273145;273146 216614;216615 216615 2 LSDEEVDEMIR Oxidation (M) 1350.5973 0.59731058 1218 P27482 CALML3 Calmodulin-like protein 3 yes yes 0 1 0 By MS/MS 10 0 1 1 44.258 43.716 2 0.00039447 49528 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 79.974 66.52 7028500 0 0 0 7028500 0 0 0 0 0 0 0 0 0 0 0 32504 1218 29685 273147 216616 216616 1789 1 LSDEPVEAK Unmodified 986.49204 0.49204087 2794 Q5TBB1 RNASEH2B Ribonuclease H2 subunit B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 21.276 21.509 2 0.0055928 21188 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.318 52.499 45572000 0 0 0 4146700 0 0 5243600 4532000 0 7627600 11023000 0 0 4641300 8358000 32505 2794 29686 273148;273149;273150;273151;273152;273153;273154 216617;216618;216619;216620;216621;216622 216619 6 LSDETLLEISK Unmodified 1246.6656 0.66564814 1702 P52789 HK2 Hexokinase-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 74.506 74.116 2 3.5665E-12 92531 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 153.97 100.8 143150000 0 100780000 0 0 0 3529900 2572200 0 2726500 5061900 4955800 0 1786200 8231100 13513000 32506 1702 29687 273155;273156;273157;273158;273159;273160;273161;273162;273163 216623;216624;216625;216626;216627;216628;216629 216626 7 LSDFGFCAQVSK Unmodified 1357.6336 0.63363651 714 O96013;Q9P286 PAK4;PAK7 Serine/threonine-protein kinase PAK 4;Serine/threonine-protein kinase PAK 7 yes no 0 0 0 By MS/MS 2 0 1 1 75.166 70.226 2 0.041584 87863 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.07 58.123 29330000 0 29330000 0 0 0 0 0 0 0 0 0 0 0 0 0 32507 714 29688 273164 216630 216630 0 LSDFGLCTGLK Unmodified 1209.6064 0.60635913 2507;5101 Q9Y2H1;Q15208 STK38L;STK38 Serine/threonine-protein kinase 38-like;Serine/threonine-protein kinase 38 no no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.12 3.72 2 1 5 2 1 1 1 1 1 1 75.13 73.426 2 4.116E-09 91844 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 132.01 89.412 144370000 0 120240000 4285500 0 0 0 0 0 0 0 0 6894400 4608700 0 8343100 32508 5101;2507 29689 273165;273166;273167;273168;273169;273170;273171;273172 216631;216632;216633;216634;216635;216636 216632 6 LSDFIDPQEGWK Unmodified 1433.6827 0.68269519 4709 Q9NWZ3 IRAK4 Interleukin-1 receptor-associated kinase 4 yes yes 0 0 0 By MS/MS 2 0 1 1 81.64 76.935 2 0.0027898 95795 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.831 65.993 30412000 0 30412000 0 0 0 0 0 0 0 0 0 0 0 0 0 32509 4709 29690 273173 216637 216637 1 LSDFNDITNMLLLK Oxidation (M) 1651.8491 0.84910859 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.33 3.93 6 1 8 2 4 1 1 1 1 1 1 1 1 1 92.094 89.703 2 2.3019E-88 111805 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 216.91 188.34 595140000 29287000 492490000 4590500 0 2622000 4310800 0 4486200 0 12916000 8535500 6053200 0 6965600 22891000 32510 1986 29691 273174;273175;273176;273177;273178;273179;273180;273181;273182;273183;273184;273185;273186;273187;273188 216638;216639;216640;216641;216642;216643;216644;216645;216646;216647;216648;216649;216650;216651;216652;216653;216654 216641 3220 17 LSDFNDITNMLLLK Unmodified 1635.8542 0.85419397 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 1 4 1 98.629 93.96 2 8.3024E-45 116692 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 211.46 193.73 499540000 40652000 454550000 4338500 0 0 0 0 0 0 0 0 0 0 0 0 32511 1986 29691 273189;273190;273191;273192;273193;273194 216655;216656;216657;216658;216659;216660;216661;216662 216655 8 LSDGEINAQESTYK Unmodified 1553.7209 0.72093119 2649 Q2KHR3 QSER1 Glutamine and serine-rich protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 2 1 1 1 39.346 39.587 2 1.447E-18 44437 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 130.56 93.218 83296000 0 0 0 4510200 0 5648400 5640100 5615300 6434800 7369700 9794900 10873000 9764900 5698600 11946000 32512 2649 29692 273195;273196;273197;273198;273199;273200;273201;273202;273203;273204;273205;273206;273207 216663;216664;216665;216666;216667;216668;216669;216670;216671;216672;216673;216674;216675;216676 216676 13 LSDGFNGADLR Unmodified 1163.5571 0.55710075 1898 P62333 PSMC6 26S protease regulatory subunit 10B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.961 52.107 2 1.5217E-06 59112 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 168 144.03 1096400000 0 0 0 49540000 58313000 147520000 29833000 20932000 32289000 143910000 219070000 223380000 31193000 42041000 98395000 32513 1898 29693 273208;273209;273210;273211;273212;273213;273214;273215;273216;273217;273218;273219 216677;216678;216679;216680;216681;216682;216683;216684;216685 216678 9 LSDGFVAAEAK Unmodified 1106.5608 0.56078914 2966 Q6R327 RICTOR Rapamycin-insensitive companion of mTOR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 46.996 47.047 2 0.0076622 53237 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 53.47 14.855 145850000 0 0 0 10790000 13628000 15432000 13183000 16055000 11848000 17738000 17836000 0 15273000 14070000 0 32514 2966 29694 273220;273221;273222;273223;273224;273225;273226;273227;273228;273229 216686 216686 1 LSDGIGVMLPQVLK Oxidation (M) 1484.8273 0.82725094 1694 P52701 MSH6 DNA mismatch repair protein Msh6 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 86.934 85.758 2 1.552E-08 99243 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.957 70.284 256240000 7518500 79426000 2602500 2967800 0 14676000 9827700 12191000 12368000 25604000 18647000 19069000 11591000 14001000 25755000 32515 1694 29695 273230;273231;273232;273233;273234;273235;273236;273237;273238;273239;273240;273241;273242;273243;273244 216687;216688;216689;216690;216691;216692;216693;216694;216695;216696;216697;216698;216699;216700;216701;216702 216691 2745 16 LSDGIGVMLPQVLK Unmodified 1468.8323 0.83233632 1694 P52701 MSH6 DNA mismatch repair protein Msh6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 91.22 90.515 2 0.0010404 104662 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.593 44.876 98098000 0 75838000 570080 0 0 1630400 1008300 2122100 0 3671300 2255200 0 0 2121600 8880100 32516 1694 29695 273245;273246;273247;273248;273249;273250;273251;273252;273253 216703;216704;216705;216706;216707 216706 5 LSDGIRK Unmodified 787.4552 0.45520186 1392 P37837 TALDO1 Transaldolase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 11.319 8.1618 2 0.044174 11440 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.15 34.573 2321600000 1578100000 333650000 409760000 0 0 0 0 0 0 0 0 0 0 0 0 32517 1392 29696 273254;273255;273256 216708 216708 0 LSDGSAYRFEVPTAK Unmodified 1639.8206 0.82058566 4300 Q9GZQ3 COMMD5 COMM domain-containing protein 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 68.615 62.642 3 0.006111 80394 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 49.188 37.748 107610000 15507000 63795000 28308000 0 0 0 0 0 0 0 0 0 0 0 0 32518 4300 29697 273257;273258;273259 216709;216710 216709 2 LSDGVAVLK Unmodified 900.52803 0.52803245 930 P10809 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 48.218 47.284 2 0.0030604 53510 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 91.853 34.676 6608100000 0 2809800000 91758000 226380000 226440000 314980000 340920000 303460000 226210000 392900000 0 384760000 435620000 303710000 551070000 32519 930 29698 273260;273261;273262;273263;273264;273265;273266;273267;273268;273269;273270;273271;273272;273273 216711;216712;216713;216714;216715;216716;216717;216718;216719;216720;216721;216722;216723;216724;216725;216726;216727 216711 16 LSDIGEGIREVTVK Unmodified 1514.8304 0.83042206 938 P11182 DBT Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial yes yes 0 0 1 By MS/MS 2 0 1 1 67.936 64.213 3 0.019418 79486 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 39.005 25.679 8212400 0 0 8212400 0 0 0 0 0 0 0 0 0 0 0 0 32520 938 29699 273274 216728 216728 0 LSDIGVEDK Unmodified 974.49204 0.49204087 3833 Q96F45 ZNF503 Zinc finger protein 503 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 31.429 31.618 2 0.0080246 34621 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 70.816 16.659 337950000 0 0 0 29186000 18151000 28346000 16734000 0 13781000 24608000 38170000 59145000 47724000 27326000 34774000 32521 3833 29700 273275;273276;273277;273278;273279;273280;273281;273282;273283;273284;273285 216729;216730;216731;216732;216733 216730 4 LSDILNEK Unmodified 930.50221 0.50221163 4669 Q9NVI1 FANCI Fanconi anemia group I protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 43.746 43.795 2 0.0053211 49553 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 107.29 32.105 117200000 0 0 0 0 11551000 21843000 13975000 18054000 16564000 17586000 0 0 0 17624000 0 32522 4669 29701 273286;273287;273288;273289;273290;273291;273292 216734;216735;216736;216737;216738;216739 216739 6 LSDINQEEASGTSLHQK Unmodified 1855.8912 0.89118442 2687 Q4L235 AASDH Acyl-CoA synthetase family member 4 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 38.19 33.406 3 0.0042746 43722 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 42.044 31.386 17653000 0 17653000 0 0 0 0 0 0 0 0 0 0 0 0 0 32523 2687 29702 273293;273294 216740;216741 216740 2 LSDISGQEMNLLLMK 2 Oxidation (M) 1722.8532 0.85320769 2823 Q5VW36 FOCAD Focadhesin yes yes 0 2 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 73.376 73.346 2 0.00042461 84726 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 55.314 33.919 12626000 0 0 0 0 5437900 0 2318800 0 4869700 0 0 0 0 0 0 32524 2823 29703 273295;273296;273297 216742 216742 4462;4463 1 LSDLAQSDPEVR Unmodified 1328.6572 0.65720872 2864 Q6AI08 HEATR6 HEAT repeat-containing protein 6 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 41.931 42.387 2 0.022148 46435 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.625 22.787 18549000 0 0 0 0 0 4163700 0 0 0 0 2670900 4028200 0 2305500 5380300 32525 2864 29704 273298;273299;273300;273301;273302 216743;216744 216744 1 LSDLDSETR Unmodified 1034.488 0.48801813 5087 Q9Y266 NUDC Nuclear migration protein nudC yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 23.523 23.105 2 9.5782E-06 24521 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 155.1 119.22 987110000 0 87724000 0 40405000 29493000 79580000 54645000 34972000 27613000 76267000 119740000 106230000 73537000 85838000 171080000 32526 5087 29705 273303;273304;273305;273306;273307;273308;273309;273310;273311;273312;273313;273314;273315;273316 216745;216746;216747;216748;216749;216750;216751;216752;216753;216754;216755;216756 216752 12 LSDLDSETRSMVEK Oxidation (M) 1624.7614 0.7614158 5087 Q9Y266 NUDC Nuclear migration protein nudC yes yes 0 1 1 By MS/MS By MS/MS 2.5 0.5 3 3 1 5 36.756 31.67 3 0.00033891 43386 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.228 86.859 778630000 63971000 714660000 0 0 0 0 0 0 0 0 0 0 0 0 0 32527 5087 29706 273317;273318;273319;273320;273321;273322 216757;216758;216759;216760;216761;216762;216763 216763 6482 7 LSDLDSETRSMVEK Unmodified 1608.7665 0.76650118 5087 Q9Y266 NUDC Nuclear migration protein nudC yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 2 3 2 53.9 48.096 2;3 2.4309E-22 65417 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 138.45 113.6 1441700000 147970000 1251100000 42567000 0 0 0 0 0 0 0 0 0 0 0 0 32528 5087 29706 273323;273324;273325;273326;273327;273328;273329 216764;216765;216766;216767;216768;216769;216770;216771;216772 216771 7 LSDLLAPISEQIK Unmodified 1425.8079 0.80789571 2055 Q01518 CAP1 Adenylyl cyclase-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.04 3.96 11 1 12 2 8 2 1 1 1 1 1 1 1 1 1 1 1 1 85.754 84.171 2;3 5.5184E-25 104836 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 155.26 129.32 6558000000 150860000 5404000000 102120000 1816900 31396000 85178000 47526000 52746000 52652000 118140000 101730000 88936000 39451000 67439000 213980000 32529 2055 29707 273330;273331;273332;273333;273334;273335;273336;273337;273338;273339;273340;273341;273342;273343;273344;273345;273346;273347;273348;273349;273350;273351;273352;273353 216773;216774;216775;216776;216777;216778;216779;216780;216781;216782;216783;216784;216785;216786;216787;216788;216789;216790;216791;216792;216793;216794;216795;216796;216797;216798;216799 216777 25 LSDLLDWKYLGR Unmodified 1477.7929 0.79291434 989 P13807 GYS1 Glycogen [starch] synthase, muscle yes yes 0 0 1 By MS/MS 10 0 1 1 72.635 72.82 3 0.020124 83530 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 31.228 5.9003 132600000 0 0 0 0 0 0 0 132600000 0 0 0 0 0 0 0 32530 989 29708 273354 216800 216800 1 LSDLQTQLSHEIQSDVLTIN Unmodified 2253.1489 0.14885567 1086 P19387 POLR2C DNA-directed RNA polymerase II subunit RPB3 yes yes 0 0 0 By MS/MS 2 0 2 2 95.464 90.599 2;3 1.5456E-71 112309 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 176.87 163.67 88686000 0 88686000 0 0 0 0 0 0 0 0 0 0 0 0 0 32531 1086 29709 273355;273356 216801;216802;216803 216803 3 LSDLSPAVIAQTNCK Unmodified 1615.824 0.82395647 3017 Q6ZUT9 DENND5B DENN domain-containing protein 5B yes yes 0 0 0 By MS/MS 2 0 1 1 72.881 67.336 2 0.0006159 85113 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.5 83.693 33873000 0 33873000 0 0 0 0 0 0 0 0 0 0 0 0 0 32532 3017 29710 273357 216804 216804 1 LSDNPAWEGDK Unmodified 1230.5517 0.55168102 4240 Q9BY42 RTFDC1 Protein RTF2 homolog yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 41.918 36.024 2 0.0015292 46747 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.52 91.302 164370000 4983000 159390000 0 0 0 0 0 0 0 0 0 0 0 0 0 32533 4240 29711 273358;273359 216805 216805 1 LSDPELGVEEEPFHTIMK Oxidation (M) 2085.9929 0.9928723 2476 Q15021 NCAPD2 Condensin complex subunit 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 75.23 75.388 3 1.0375E-26 87029 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 106.93 96.162 152460000 0 0 0 0 0 23565000 0 13370000 0 24926000 16676000 22599000 11899000 16342000 23082000 32534 2476 29712 273360;273361;273362;273363;273364;273365;273366;273367 216806;216807;216808;216809;216810;216811;216812 216812 4083 7 LSDPELGVEEEPFHTIMK Unmodified 2069.998 0.99795767 2476 Q15021 NCAPD2 Condensin complex subunit 1 yes yes 0 0 0 By MS/MS 10 0 1 1 80.609 80.824 3 0.00073864 93098 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.945 39.54 14731000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14731000 32535 2476 29712 273368 216813 216813 1 LSDPGIPITVLSR Unmodified 1366.782 0.78201531 1159 P23458 JAK1 Tyrosine-protein kinase JAK1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 83.32 83.383 2 0.0049485 96678 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 49.777 39.545 97062000 0 0 0 2809300 4705400 6085600 4372100 6893300 5749400 11308000 9345200 10637000 8675600 11458000 15023000 32536 1159 29713 273369;273370;273371;273372;273373;273374;273375;273376;273377;273378;273379;273380 216814;216815;216816;216817;216818;216819 216819 6 LSDPIVNTLAK Unmodified 1169.6656 0.66558856 2267 Q13309 SKP2 S-phase kinase-associated protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.389 68.467 2 0.0048432 77637 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.349 36.541 79190000 0 0 0 3122900 3085100 7605200 6888100 4511600 3267300 9175900 7347300 9353000 5924500 6531800 12377000 32537 2267 29714 273381;273382;273383;273384;273385;273386;273387;273388;273389;273390;273391;273392 216820;216821;216822;216823;216824;216825 216823 6 LSDQFHDILIR Unmodified 1355.7197 0.7197494 480 O75340 PDCD6 Programmed cell death protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 72.587 72.711 3 0.0010246 83453 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 71.555 54.188 145170000 0 0 0 0 4885900 14691000 0 14097000 7473100 13176000 10907000 15610000 11377000 11539000 41412000 32538 480 29715 273393;273394;273395;273396;273397;273398;273399;273400;273401;273402 216826;216827;216828;216829;216830;216831;216832;216833 216828 8 LSDQSANNNNVFTK Unmodified 1550.7325 0.73249893 3169 Q86VP1 TAX1BP1 Tax1-binding protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 38.828 33.86 2 6.9224E-31 44167 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 149.23 131.42 18387000 0 18387000 0 0 0 0 0 0 0 0 0 0 0 0 0 32539 3169 29716 273403 216834 216834 1 LSDSENEEPSR Unmodified 1261.5422 0.54223854 3411 Q8NCN4 RNF169 E3 ubiquitin-protein ligase RNF169 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 13.018 13.324 2 0.015862 11893 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.57 25.476 3170400 0 0 0 0 0 0 0 0 0 0 0 0 1756300 0 1414100 32540 3411 29717 273404;273405 216835;216836 216835 2 LSDSIAATSELER Unmodified 1390.694 0.69398816 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 56.726 56.996 2 0.0003702 63896 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 102.53 73.804 35027000 0 0 0 0 0 15332000 0 0 0 0 0 0 6791500 5045400 7857200 32541 2556 29718 273406;273407;273408;273409;273410;273411;273412 216837;216838;216839;216840;216841;216842;216843 216841 7 LSDSIAATSELERK Unmodified 1518.789 0.78895118 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 2 2 2 2 2 2 1 2 2 2 1 48.55 48.746 2;3 2.51E-99 54830 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 199.03 175.18 704960000 0 0 0 0 35048000 52173000 49090000 78701000 82686000 80438000 15023000 120900000 102660000 69011000 19221000 32542 2556 29719 273413;273414;273415;273416;273417;273418;273419;273420;273421;273422;273423;273424;273425;273426;273427;273428;273429;273430;273431;273432 216844;216845;216846;216847;216848;216849;216850;216851;216852;216853;216854;216855;216856;216857;216858;216859 216851 11 LSDSLGQR Unmodified 874.45084 0.45084476 1113 P20810 CAST Calpastatin yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 21.228 21.488 2 0.0067278 22232 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 98.418 33.871 380870000 0 0 0 27656000 0 31005000 27333000 19677000 0 20848000 50366000 66665000 29213000 36356000 71752000 32543 1113 29720 273433;273434;273435;273436;273437;273438;273439;273440;273441;273442 216860;216861;216862;216863;216864;216865;216866 216863 4 LSDSLGQRQPDPDENK Unmodified 1797.8493 0.8493196 1113 P20810 CAST Calpastatin yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 33.863 29.285 3 0.04712 38477 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 28.58 13.188 11014000 0 11014000 0 0 0 0 0 0 0 0 0 0 0 0 0 32544 1113 29721 273443;273444 216867 216867 1 LSDSLGQRQPDPDENKPMEDK Unmodified 2398.1071 0.10706721 1113 P20810 CAST Calpastatin yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 3 24 1 1 1 2 2 2 2 2 2 2 2 2 2 2 2 37.096 36.687 3;4 1.7228E-46 40162 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 115.42 107.23 677250000 38348000 23584000 17285000 27457000 19883000 25748000 25264000 32131000 19980000 27474000 50080000 87716000 29259000 60777000 192260000 32545 1113 29722 273445;273446;273447;273448;273449;273450;273451;273452;273453;273454;273455;273456;273457;273458;273459;273460;273461;273462;273463;273464;273465;273466;273467;273468;273469;273470;273471 216868;216869;216870;216871;216872;216873;216874;216875;216876;216877;216878;216879;216880;216881;216882;216883;216884 216881 15 LSDSLGQRQPDPDENKPMEDK Oxidation (M) 2414.102 0.10198183 1113 P20810 CAST Calpastatin yes yes 0 1 2 By MS/MS By MS/MS By MS/MS 2 0 5 2 1 2 34.959 30.113 3;4 0.00047943 39666 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.784 62.775 195480000 122880000 9797200 62800000 0 0 0 0 0 0 0 0 0 0 0 0 32546 1113 29722 273472;273473;273474;273475;273476 216885;216886 216885 1601 2 LSDSTLK Unmodified 762.41233 0.41233399 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.67 3.77 4 2 2 1 1 1 1 16.084 14.821 2 0.026078 14861 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 79.469 0 462960000 20319000 399200000 121370 0 7345900 0 0 0 0 0 0 35973000 0 0 0 32547 528 29723 273477;273478;273479;273480;273481;273482 216887;216888 216888 2 LSDSYSNTLPVRK Unmodified 1478.7729 0.77290718 5070 Q9UQB8 BAIAP2 Brain-specific angiogenesis inhibitor 1-associated protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 43.888 43.888 3 0.0093516 47961 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 24.72 18.584 43591000 0 0 0 4918200 3816300 7531500 0 0 0 0 0 0 0 8378700 18946000 32548 5070 29724 273483;273484;273485;273486;273487 216889;216890;216891 216889 3 LSDTPAPK Unmodified 827.43888 0.43888309 3404 Q8NBZ0 INO80E INO80 complex subunit E yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 13.87 13.919 2 0.018283 13360 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 64.567 34.76 57441000 0 0 0 5751600 8828400 7512200 0 7103000 6678100 11826000 0 0 9742600 0 0 32549 3404 29725 273488;273489;273490;273491;273492;273493;273494 216892;216893;216894;216895 216893 4 LSDTTEYQPILSSYSHR Unmodified 1995.9538 0.95378467 2810 Q5VT52 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 1 1 2 1 2 1 1 2 2 1 2 67.769 67.907 2;3 1.6668E-38 77878 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 141.55 135.97 853070000 0 0 0 33705000 38703000 55894000 49855000 80014000 74407000 73499000 80648000 108210000 78488000 79189000 100460000 32550 2810 29726 273495;273496;273497;273498;273499;273500;273501;273502;273503;273504;273505;273506;273507;273508;273509;273510;273511 216896;216897;216898;216899;216900;216901;216902;216903;216904;216905;216906;216907;216908;216909;216910;216911;216912;216913 216907 18 LSDVARTCEQMLEN Oxidation (M) 1680.7447 0.74471988 4790 Q9P086 MED11 Mediator of RNA polymerase II transcription subunit 11 yes yes 0 1 1 By MS/MS 2.5 0.5 1 1 2 43.71 38.714 2 0.044202 50195 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.9 67.668 14501000 0 14501000 0 0 0 0 0 0 0 0 0 0 0 0 0 32551 4790 29727 273512;273513 216914 216914 1 LSDVDANTAIK Unmodified 1145.5928 0.59281755 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 36.279 36.655 2 0.00064191 39243 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 95.523 43.669 60181000 0 0 0 0 0 0 0 0 6235700 0 0 0 16569000 16219000 21157000 32552 2203 29728 273514;273515;273516;273517 216915;216916;216917 216917 3 LSDVFGSVR Unmodified 978.51345 0.51344502 4973 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 57.375 57.499 2 0.03116 65352 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 47.869 17.521 126420000 0 0 0 9339200 10905000 0 9914800 12501000 0 12751000 14261000 10529000 12273000 12004000 21940000 32553 4973 29729 273518;273519;273520;273521;273522;273523;273524;273525;273526;273527 216918 216918 1 LSDVLKPLTDAQVEAMK Unmodified 1856.9918 0.99175008 3663 Q92797 SYMPK Symplekin yes yes 0 0 1 By matching By matching By MS/MS 10 0 3 1 1 1 78.419 78.603 3 0.0076968 90472 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 34.125 27.174 12726000 0 0 0 0 0 0 0 1951800 0 0 0 0 0 3223600 7550300 32554 3663 29730 273528;273529;273530 216919 216919 1 LSDVTLVPVSCSELEK Unmodified 1774.9023 0.90226638 702 O95865 DDAH2 N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 82.806 78.829 2;3 0.001192 97791 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.356 58.529 472600000 0 470850000 1753400 0 0 0 0 0 0 0 0 0 0 0 0 32555 702 29731 273531;273532;273533 216920;216921;216922 216920 3 LSDYAEQVR Unmodified 1079.5247 0.52473799 3665 Q92805 GOLGA1 Golgin subfamily A member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 32.683 32.974 2 0.0083723 35968 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 69.812 41.594 143310000 0 0 0 0 23564000 0 0 0 0 39896000 0 35347000 0 0 44505000 32556 3665 29732 273534;273535;273536;273537 216923;216924;216925;216926 216925 4 LSDYDSSEEAIRTLDQISDADNIPGLLVLK Unmodified 3289.6565 0.65654661 2947 Q6PGP7 TTC37 Tetratricopeptide repeat protein 37 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 98.99 93.711 3 1.0425E-77 117775 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 121.62 116.57 27269000 23348000 0 3920900 0 0 0 0 0 0 0 0 0 0 0 0 32557 2947 29733 273538;273539 216927;216928 216927 2 LSEAAGRVGSDMTSQQEFTSCLK Oxidation (M) 2517.1476 0.14755181 1421 P40855 PEX19 Peroxisomal biogenesis factor 19 yes yes 0 1 1 By MS/MS 2 0 1 1 62.095 56.219 3 0.00042285 72238 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 54.943 47.046 13782000 0 13782000 0 0 0 0 0 0 0 0 0 0 0 0 0 32558 1421 29734 273540 216929 216929 2236 1 LSEAAGRVGSDMTSQQEFTSCLK Unmodified 2501.1526 0.15263719 1421 P40855 PEX19 Peroxisomal biogenesis factor 19 yes yes 0 0 1 By MS/MS 2 0 1 1 72.023 66.296 3 1.2186E-13 84084 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.826 72.366 30921000 0 30921000 0 0 0 0 0 0 0 0 0 0 0 0 0 32559 1421 29734 273541 216930 216930 1 LSEAESQCALK Unmodified 1234.5864 0.58635197 401 O60447 EVI5 Ecotropic viral integration site 5 protein homolog yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 27.47 27.807 2 0.00398 29910 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 87.913 68.642 21478000 0 0 0 0 0 4998100 0 0 0 0 0 0 4543500 4300800 7635300 32560 401 29735 273542;273543;273544;273545;273546 216931;216932;216933 216931 3 LSECEEQAK Unmodified 1092.4757 0.47573888 3039 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 8.9523 9.085 2 0.0031425 6387 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 133.55 106.95 43683000 0 0 0 3142300 0 8935200 3502800 0 0 0 11133000 0 0 4704000 12266000 32561 3039 29736 273547;273548;273549;273550;273551;273552 216934;216935;216936;216937;216938 216936 5 LSECSLTK Unmodified 936.45863 0.45863226 3950 Q96PZ0 PUS7 Pseudouridylate synthase 7 homolog yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 24.801 25.071 2 0.006809 26012 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 95.909 46.319 47016000 0 0 0 0 4746100 0 0 0 2646600 6440400 0 11543000 0 4992300 16648000 32562 3950 29737 273553;273554;273555;273556;273557;273558 216939;216940;216941 216941 3 LSEDGTYTGFIK Unmodified 1329.6452 0.64524705 3578 Q8WWW0 RASSF5 Ras association domain-containing protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 8 3.46 1 3 1 1 1 1 66.036 64.465 2 1.0864E-09 81152 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.63 82.631 54749000 0 47828000 0 0 1618300 2974100 2328300 0 0 0 0 0 0 0 0 32563 3578 29738 273559;273560;273561;273562 216942;216943 216943 2 LSEDIDLLK Unmodified 1044.5703 0.5702912 311 O43264 ZW10 Centromere/kinetochore protein zw10 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.83 3.67 3 1 2 1 2 1 1 1 75.323 69.945 2 2.3212E-06 88982 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 166.52 65.232 221890000 19221000 201310000 1357500 0 0 0 0 0 0 0 0 0 0 0 0 32564 311 29739 273563;273564;273565;273566;273567;273568 216944;216945;216946;216947;216948;216949 216945 6 LSEDLNTIPEVHK Unmodified 1493.7726 0.77257283 235 O14977 AZIN1 Antizyme inhibitor 1 yes yes 0 0 0 By MS/MS 2 0 1 1 63.129 57.236 3 2.39E-06 73406 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.312 67.545 17064000 0 17064000 0 0 0 0 0 0 0 0 0 0 0 0 0 32565 235 29740 273569 216950 216950 1 LSEDSLTK Unmodified 891.45493 0.45492709 2250 Q13188 STK3 Serine/threonine-protein kinase 3;Serine/threonine-protein kinase 3 36kDa subunit;Serine/threonine-protein kinase 3 20kDa subunit yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 28.391 24.096 2 0.021189 31657 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.916 44.343 113740000 0 113740000 0 0 0 0 0 0 0 0 0 0 0 0 0 32566 2250 29741 273570;273571 216951 216951 1 LSEDYGVLK Unmodified 1022.5284 0.52842638 1317 P32119 PRDX2 Peroxiredoxin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.384 49.542 2 0.0034358 56707 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 106.04 66.085 1434500000 0 0 0 85719000 39911000 51095000 47483000 83989000 33722000 58457000 244450000 200700000 65576000 158870000 364510000 32567 1317 29742 273572;273573;273574;273575;273576;273577;273578;273579;273580;273581;273582;273583 216952;216953;216954;216955;216956;216957;216958;216959;216960;216961;216962;216963;216964;216965;216966;216967 216967 15 LSEEASQALIEAYVDMRK Oxidation (M) 2068.0147 0.014670371 1332 P33991 MCM4 DNA replication licensing factor MCM4 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 82.404 82.545 3 9.4919E-06 95308 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.152 58.911 37681000 0 0 0 0 0 4034300 0 0 0 0 6047000 5508700 0 0 22091000 32568 1332 29743 273584;273585;273586;273587 216968;216969 216968 1997 2 LSEEEILENPDLFLTSEATDYGRQLHDDYFYHDEL Unmodified 4215.9073 0.90729458 2400 Q14257 RCN2 Reticulocalbin-2 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 98.342 92.521 4 2.6323E-118 116879 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 134.63 133.14 173360000 173360000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32569 2400 29744 273588;273589 216970;216971 216971 2 LSEEFLTAHPR Unmodified 1298.6619 0.66190017 2582 Q15813 TBCE Tubulin-specific chaperone E yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 51.483 51.872 3 0.022597 58677 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 29.303 13.413 61627000 0 0 0 0 0 11274000 0 0 5223200 0 7705900 11890000 10820000 0 14713000 32570 2582 29745 273590;273591;273592;273593;273594;273595 216972 216972 1 LSEEGLEGK Unmodified 960.47639 0.47639081 2800 Q5THK1 PRR14L Protein PRR14L yes yes 0 0 0 By MS/MS 2 0 1 1 28.861 24.513 2 0.035373 32110 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 63.534 2.5619 23393000 0 23393000 0 0 0 0 0 0 0 0 0 0 0 0 0 32571 2800 29746 273596 216973 216973 1 LSEEIDQLR Unmodified 1101.5666 0.5666028 4363 Q9H2D6 TRIOBP TRIO and F-actin-binding protein yes yes 0 0 0 By MS/MS 10 0 1 1 50.094 50.153 2 0.051487 56730 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 57.96 19.874 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32572 4363 29747 273597 216974 216974 1 LSEELSGGR Unmodified 946.47197 0.47197413 1835 P61158;Q9P1U1 ACTR3;ACTR3B Actin-related protein 3;Actin-related protein 3B yes no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.204 23.408 2 0.0047566 24533 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 116.73 37.61 239850000 0 0 0 20095000 10967000 12211000 9850300 10113000 6285800 15592000 28942000 33724000 17105000 19902000 55060000 32573 1835 29748 273598;273599;273600;273601;273602;273603;273604;273605;273606;273607;273608;273609 216975;216976;216977;216978;216979;216980;216981 216977 6 LSEELSGGRLK Unmodified 1187.651 0.65100113 1835 P61158 ACTR3 Actin-related protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 2 3 2 40.027 35.004 2;3 6.3254E-08 44130 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 190.62 0 168910000 60127000 34708000 74073000 0 0 0 0 0 0 0 0 0 0 0 0 32574 1835 29749 273610;273611;273612;273613;273614;273615;273616 216982;216983;216984;216985;216986;216987 216987 4 LSEELSGGRLKPK Unmodified 1412.7987 0.798728 1835 P61158 ACTR3 Actin-related protein 3 yes yes 0 0 2 By MS/MS 2 0 1 1 40.987 34.306 3 0.04237 47496 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 38.279 0 12649000 12649000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32575 1835 29750 273617 216988 216988 0 LSEEMTQR Unmodified 992.45969 0.45969489 3168 Q86VN1 VPS36 Vacuolar protein-sorting-associated protein 36 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 19.051 19.428 2 0.016501 19989 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 67.169 44.15 6213100 0 0 0 0 0 0 0 0 0 2240200 0 0 0 0 3973000 32576 3168 29751 273618;273619 216989 216989 1 LSEENIDSSAGNGVLTK Unmodified 1732.8479 0.84792262 4807 Q9P260 KIAA1468 LisH domain and HEAT repeat-containing protein KIAA1468 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 54.53 54.587 2 0.0056216 62060 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.726 35.348 18361000 0 0 0 3472100 0 4184500 2469700 0 0 3959400 0 0 0 0 4274900 32577 4807 29752 273620;273621;273622;273623;273624 216990 216990 1 LSEFGIR Unmodified 820.4443 0.44430282 4857 Q9UBT2 UBA2 SUMO-activating enzyme subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 49.299 49.619 2 0.016475 54806 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 149.06 53.103 137160000 0 0 0 0 0 12546000 0 0 0 9626700 27571000 0 0 19878000 67534000 32578 4857 29753 273625;273626;273627;273628;273629 216991;216992;216993;216994;216995 216993 5 LSEGFSIHTR Unmodified 1145.5829 0.58292157 1107 P20618 PSMB1 Proteasome subunit beta type-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 42.81 43.144 3 0.013591 46845 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.706 33.353 328010000 0 0 0 0 0 15333000 10061000 18135000 0 15738000 66188000 42063000 20553000 38156000 101780000 32579 1107 29754 273630;273631;273632;273633;273634;273635;273636;273637;273638 216996;216997;216998 216996 2 LSEGSQPAEEEEDQETPSR Unmodified 2116.9033 0.90326525 4976 Q9UKV3 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.037 30.229 2 8.9218E-50 32604 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 175.15 159.01 119270000 0 0 0 10428000 4655800 6639300 7627000 5115000 5289400 9054000 8885000 15203000 13344000 13388000 19638000 32580 4976 29755 273639;273640;273641;273642;273643;273644;273645;273646;273647;273648;273649;273650 216999;217000;217001;217002;217003;217004;217005;217006;217007;217008;217009 217008 11 LSEHATAPTR Unmodified 1081.5516 0.55162144 1330 P33316 DUT Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 12.048 12.162 2 0.0019652 10787 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 99.013 76.882 109220000 0 0 0 2334800 2774300 3539200 3208900 3808400 2830500 0 0 15364000 4221000 14042000 57094000 32581 1330 29756 273651;273652;273653;273654;273655;273656;273657;273658;273659;273660 217010;217011;217012 217012 3 LSEHSGPPIVIR Unmodified 1303.7248 0.72483478 3004 Q6ZRI6 C15orf39 Uncharacterized protein C15orf39 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 49.989 49.987 3 0.0024753 56186 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 58.511 40.692 61508000 0 0 0 4601000 4921100 7899200 8873300 7483800 5126400 7798400 0 0 10944000 3860800 0 32582 3004 29757 273661;273662;273663;273664;273665;273666;273667;273668;273669 217013;217014;217015;217016;217017;217018;217019;217020 217013 8 LSEHTEDLPK Unmodified 1167.5772 0.57716749 4381 Q9H3P2 NELFA Negative elongation factor A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.04 2.54 2 1 21 2 1 1 2 1 2 2 2 2 2 2 2 1 2 25.762 25.465 2;3 8.6541E-05 33310 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 162.49 123.17 554810000 0 70553000 10412000 36708000 28567000 43214000 48737000 38427000 32817000 44763000 36830000 40169000 35501000 31730000 56385000 32583 4381 29758 273670;273671;273672;273673;273674;273675;273676;273677;273678;273679;273680;273681;273682;273683;273684;273685;273686;273687;273688;273689;273690;273691;273692;273693 217021;217022;217023;217024;217025;217026;217027;217028;217029;217030;217031;217032;217033 217023 11 LSEIDVSSEGVK Unmodified 1261.6402 0.64016167 3770 Q96C19 EFHD2 EF-hand domain-containing protein D2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 51.134 49.592 2 3.453E-15 62396 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 148.73 85.846 975850000 9266300 260630000 0 34478000 39448000 44885000 45751000 43522000 35862000 63203000 70630000 0 73928000 78895000 175350000 32584 3770 29759 273694;273695;273696;273697;273698;273699;273700;273701;273702;273703;273704;273705;273706;273707;273708;273709 217034;217035;217036;217037;217038;217039;217040;217041;217042;217043;217044;217045;217046;217047;217048;217049;217050;217051;217052 217038 19 LSEIMEK Oxidation (M) 864.42627 0.4262695 734 P00568 AK1 Adenylate kinase isoenzyme 1 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 19.156 16.069 2 0.037157 21097 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.469 14.665 299580000 0 292650000 6937300 0 0 0 0 0 0 0 0 0 0 0 0 32585 734 29760 273710;273711 217053 217053 1 LSEIMEK Unmodified 848.43135 0.43135487 734 P00568 AK1 Adenylate kinase isoenzyme 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.82 3.56 3 8 1 1 1 1 1 1 1 1 2 1 29.685 28.67 2 0.022382 36922 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.32 19.288 565280000 15504000 453850000 8527200 0 0 0 0 935770 767380 12914000 20272000 13817000 0 12176000 26509000 32586 734 29760 273712;273713;273714;273715;273716;273717;273718;273719;273720;273721;273722 217054;217055;217056;217057 217054 4 LSEISGIPLDDIEFAK Unmodified 1745.9087 0.90873196 3903 Q96K76 USP47 Ubiquitin carboxyl-terminal hydrolase 47 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.7 3.52 2 1 7 1 2 1 1 1 1 1 1 1 91.655 90.144 2 2.2085E-10 111663 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.13 106.84 351020000 13985000 323190000 0 0 0 0 1032800 1282300 1048400 3812900 2289000 2500900 0 1873400 0 32587 3903 29761 273723;273724;273725;273726;273727;273728;273729;273730;273731;273732 217058;217059;217060;217061;217062;217063 217060 6 LSEITEKPPR Unmodified 1168.6452 0.64518747 3808 Q96EB6 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 28.127 28.562 3 0.015014 29652 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.148 27.615 36019000 0 0 0 0 0 0 0 2757900 0 6317700 7714300 9122800 0 0 10107000 32588 3808 29762 273733;273734;273735;273736;273737 217064;217065;217066 217065 3 LSEITEKPPRTQK Unmodified 1525.8464 0.84640648 3808 Q96EB6 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment yes yes 0 0 2 By MS/MS By matching 2 0 3 2 1 28.793 24.027 3;4 0.02072 33894 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.891 26.11 95794000 94603000 0 1191700 0 0 0 0 0 0 0 0 0 0 0 0 32589 3808 29763 273738;273739;273740 217067;217068 217068 1 LSEIVTLAK Unmodified 972.58555 0.58554733 4827 Q9P2R7 SUCLA2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 67.02 61.104 2 0.001723 77878 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 133.58 68.825 59273000 0 59273000 0 0 0 0 0 0 0 0 0 0 0 0 0 32590 4827 29764 273741 217069 217069 1 LSELAVEK Unmodified 887.4964 0.49639797 535 O75717 WDHD1 WD repeat and HMG-box DNA-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching 2 0 3 1 1 1 40.232 35.14 2 0.018202 46021 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.46 38.673 377710000 6910500 365160000 5635100 0 0 0 0 0 0 0 0 0 0 0 0 32591 535 29765 273742;273743;273744 217070 217070 0 LSELEAALQR Unmodified 1128.6139 0.61388734 67;51 CON__H-INV:HIT000292931;CON__P05787;P05787;CON__Q9H552;CON__REFSEQ:XP_092267 KRT8 Keratin, type II cytoskeletal 8 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 4 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 63.608 63.093 2 1.5547E-08 78182 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 156.75 104.04 + 5826100000 0 217110000 25937000 286470000 528980000 448540000 494400000 433320000 276040000 508460000 473760000 604520000 465470000 451710000 611430000 32592 51;67 29766 273745;273746;273747;273748;273749;273750;273751;273752;273753;273754;273755;273756;273757;273758;273759;273760 217071;217072;217073;217074;217075;217076;217077;217078;217079;217080;217081;217082;217083;217084;217085;217086;217087;217088;217089;217090;217091;217092;217093;217094;217095;217096;217097;217098;217099 217088 29 LSELEAALQRAK Unmodified 1327.746 0.74596415 67;51 CON__H-INV:HIT000292931;CON__P05787;P05787;CON__Q9H552;CON__REFSEQ:XP_092267 KRT8 Keratin, type II cytoskeletal 8 no no 0 0 1 By MS/MS By MS/MS By MS/MS 2.17 0.553 1 8 3 4 4 4 74.801 70.586 2;3 4.4485E-64 95275 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 215.93 146.33 + 2339700000 1373800000 809470000 156420000 0 0 0 0 0 0 0 0 0 0 0 0 32593 51;67 29767 273761;273762;273763;273764;273765;273766;273767;273768;273769;273770;273771;273772 217100;217101;217102;217103;217104;217105;217106;217107;217108;217109 217104 8 LSELEAANK Unmodified 973.50803 0.50802529 2977 Q6UVJ0 SASS6 Spindle assembly abnormal protein 6 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 2 2 1 1 2 2 1 1 1 1 22.681 22.818 2 0.003232 26867 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 129.56 66.262 148940000 0 0 0 17791000 19687000 8563800 0 16043000 11622000 16817000 0 16106000 16381000 9323000 16601000 32594 2977 29768 273773;273774;273775;273776;273777;273778;273779;273780;273781;273782;273783;273784;273785;273786 217110;217111;217112;217113;217114;217115;217116;217117;217118;217119;217120 217119 11 LSELEFHNSK Unmodified 1202.5932 0.5931519 399 O60437 PPL Periplakin yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 37.187 37.359 3 0.011338 41915 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 48.741 37.528 69862000 0 0 0 16738000 3727900 3475800 5084700 8141500 0 6509600 4935600 5161200 7413300 0 8674400 32595 399 29769 273787;273788;273789;273790;273791;273792;273793;273794;273795;273796 217121;217122 217122 2 LSELEPGTGDLR Unmodified 1285.6514 0.65139506 1802 P58107 EPPK1 Epiplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 2 1 1 1 1 1 1 1 53.121 53.142 2 4.8765E-08 59917 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 121.73 32.785 116070000 0 0 0 16878000 6146600 11753000 8670800 10843000 0 15449000 17677000 0 16678000 11972000 0 32596 1802 29770 273797;273798;273799;273800;273801;273802;273803;273804;273805;273806;273807 217123;217124;217125;217126;217127;217128;217129;217130;217131 217129 9 LSELIQPLPLER Unmodified 1406.8133 0.81331543 3675 Q92876 KLK6 Kallikrein-6 yes yes 0 0 0 By MS/MS 10 0 1 1 84.101 83.707 2 0.0001659 97245 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 85.377 62.736 1823600 0 0 0 1823600 0 0 0 0 0 0 0 0 0 0 0 32597 3675 29771 273808 217132;217133;217134 217133 3 LSELLDQAPEGR Unmodified 1326.6779 0.67794416 4869 Q9UDY8 MALT1 Mucosa-associated lymphoid tissue lymphoma translocation protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.917 56.043 2 0.00091386 62642 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.171 44.034 74223000 0 0 0 4276100 4503000 6603400 5319400 5072700 2981100 6640600 7350200 12423000 5705600 3305400 10043000 32598 4869 29772 273809;273810;273811;273812;273813;273814;273815;273816;273817;273818;273819;273820 217135;217136;217137;217138;217139;217140;217141 217138 7 LSELLPEEVEAEVK Unmodified 1583.8294 0.82941901 5125 Q9Y2X3 NOP58 Nucleolar protein 58 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.139 82.201 2 5.9469E-08 95186 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 95.162 59.938 93391000 0 0 0 1281000 5256900 6178500 3611800 6947000 6157700 10316000 10844000 14636000 4382500 7771300 16008000 32599 5125 29773 273821;273822;273823;273824;273825;273826;273827;273828;273829;273830;273831;273832 217142;217143;217144;217145;217146;217147;217148;217149;217150;217151;217152;217153;217154 217143 12 LSELLRYYTSASGDEMVSLK Unmodified 2261.1249 0.1249491 850 P07900 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 90.012 83.498 3 5.5236E-13 106214 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.66 68.952 22467000 10361000 12106000 0 0 0 0 0 0 0 0 0 0 0 0 0 32600 850 29774 273833;273834 217155;217156 217156 1 LSELQETSEQAQSK Unmodified 1576.758 0.75804498 2768 Q5T1M5 FKBP15 FK506-binding protein 15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31.949 31.316 2 4.1946E-59 39121 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 198.81 174.96 221940000 6379000 33923000 0 7815800 7415500 15394000 10056000 10925000 10291000 11876000 15261000 27154000 18711000 19205000 27530000 32601 2768 29775 273835;273836;273837;273838;273839;273840;273841;273842;273843;273844;273845;273846;273847;273848 217157;217158;217159;217160;217161;217162;217163;217164;217165;217166;217167;217168;217169;217170 217160 14 LSELQLR Unmodified 857.49707 0.49706667 4191 Q9BVK6 TMED9 Transmembrane emp24 domain-containing protein 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 2 2 1 2 1 1 1 46.859 46.935 2 0.020109 51607 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 108.98 39.749 248550000 0 0 0 22791000 19919000 34202000 28943000 0 20615000 28428000 0 0 31093000 20356000 42206000 32602 4191 29776 273849;273850;273851;273852;273853;273854;273855;273856;273857;273858;273859;273860 217171;217172;217173;217174;217175 217173 5 LSEMDSFNNQLK Unmodified 1424.6606 0.66057954 4774 Q9NZM3 ITSN2 Intersectin-2 yes yes 0 0 0 By MS/MS 2 0 1 1 64.325 58.418 2 0.021595 74902 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.489 49.322 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32603 4774 29777 273861 217176 217176 1 LSEMEAYLENIEK Unmodified 1567.744 0.74397482 169 O00566 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 yes yes 0 0 0 By MS/MS 2 0 1 1 88.432 83.589 2 0.035192 103886 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.179 42.618 10953000 0 10953000 0 0 0 0 0 0 0 0 0 0 0 0 0 32604 169 29778 273862 217177 217177 0 LSENAGIQSLLLSK Unmodified 1471.8246 0.8246084 4792 Q9P0K7 RAI14 Ankycorbin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.67 2.98 1 5 1 1 1 1 1 1 82.962 82.258 2 0.029211 95109 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 45.653 19.714 30721000 0 12640000 0 0 0 3710100 0 0 2847600 3086200 0 0 2625300 0 5811900 32605 4792 29779 273863;273864;273865;273866;273867;273868 217178;217179;217180 217179 3 LSEPAIATNHNK Unmodified 1293.6677 0.66771383 3024 Q70CQ2 USP34 Ubiquitin carboxyl-terminal hydrolase 34 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 33.967 29.273 3 0.0035128 40473 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.88 29.668 146380000 23742000 105900000 16735000 0 0 0 0 0 0 0 0 0 0 0 0 32606 3024 29780 273869;273870;273871;273872 217181;217182;217183;217184 217183 3 LSEPSLPIEDSQDLYNASPEPK Unmodified 2428.1646 0.16456531 4492 Q9HAW4 CLSPN Claspin yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.64 1.67 1 21 1 2 1 2 2 2 2 2 2 2 2 2 82.046 81.933 2;3 7.2362E-34 94916 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 103.4 91.61 111180000 0 20387000 0 0 6090800 3370500 5596100 6741600 4889700 10814000 10547000 13208000 5686400 7806800 16042000 32607 4492 29781 273873;273874;273875;273876;273877;273878;273879;273880;273881;273882;273883;273884;273885;273886;273887;273888;273889;273890;273891;273892;273893;273894 217185;217186;217187;217188;217189;217190;217191;217192;217193;217194;217195 217185 11 LSEPVRVHNDDK Unmodified 1407.7106 0.71064128 3423 Q8NEC7 GSTCD Glutathione S-transferase C-terminal domain-containing protein yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 23.348 19.427 3 0.025664 27541 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.594 29.785 45850000 39294000 0 6556400 0 0 0 0 0 0 0 0 0 0 0 0 32608 3423 29782 273895;273896 217196 217196 1 LSEQEAITR Unmodified 1045.5404 0.54038805 5379 yes yes 0 0 0 By MS/MS 10 0 1 1 34.333 35.073 2 0.019171 37937 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 54.205 5.9219 + 271320000 0 0 0 0 0 0 0 0 0 0 0 271320000 0 0 0 32609 5379 29783 273897 217197 217197 1 LSEQEELK Unmodified 974.49204 0.49204087 28 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 25.542 21.338 2 0.029063 28429 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.072 30.236 66194000 0 66194000 0 0 0 0 0 0 0 0 0 0 0 0 0 32610 28 29784 273898 217198 217198 1 LSEQLQQK Unmodified 972.52401 0.52400971 4050 Q99708 RBBP8 DNA endonuclease RBBP8 yes yes 0 0 0 By MS/MS 2 0 1 1 20.952 17.239 2 0.033092 22693 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.637 27.755 6867500 0 6867500 0 0 0 0 0 0 0 0 0 0 0 0 0 32611 4050 29785 273899 217199 217199 1 LSEQNPAASYYNVDVLK Unmodified 1909.9422 0.94215736 2174 Q0JRZ9 FCHO2 F-BAR domain only protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 80.762 76.057 2 5.0884E-07 94606 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.337 81.17 26794000 0 26794000 0 0 0 0 0 0 0 0 0 0 0 0 0 32612 2174 29786 273900 217200 217200 1 LSESGAIMTDLEENPK Oxidation (M) 1748.8138 0.8138453 4368 Q9H2J4 PDCL3 Phosducin-like protein 3 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 60.944 55.606 2 4.3655E-66 71428 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 189.33 161.15 37987000 0 37987000 0 0 0 0 0 0 0 0 0 0 0 0 0 32613 4368 29787 273901;273902 217201;217202 217201 5826 2 LSESGAIMTDLEENPK Unmodified 1732.8189 0.81893068 4368 Q9H2J4 PDCL3 Phosducin-like protein 3 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 75.566 71.819 2 1.7901E-72 90010 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 227.31 192.78 288460000 0 284950000 3505000 0 0 0 0 0 0 0 0 0 0 0 0 32614 4368 29787 273903;273904;273905 217203;217204;217205 217203 3 LSESLHVVDENK Unmodified 1368.6885 0.68850885 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 39.456 39.654 3 0.018635 42936 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 37.248 13.398 117190000 0 0 0 10447000 10194000 7288200 0 0 0 14001000 17949000 14646000 13506000 11379000 17783000 32615 3443 29788 273906;273907;273908;273909;273910;273911;273912;273913;273914 217206 217206 1 LSESRHQQEAATTQLEQLHQEAK Unmodified 2661.3107 0.31066947 4179 Q9BV73 CEP250 Centrosome-associated protein CEP250 yes yes 0 0 1 By MS/MS 2 0 1 1 51.913 43.951 4 0.0032745 60677 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.216 33.403 11048000 11048000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32616 4179 29789 273915 217207 217207 1 LSESSALK Unmodified 833.44945 0.44944778 3983 Q96S55 WRNIP1 ATPase WRNIP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.169 20.37 2 0.015934 20917 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 68.081 27.508 132020000 0 0 0 6836400 7521900 11852000 7895400 8176100 7449100 13062000 13630000 16233000 11138000 11135000 17093000 32617 3983 29790 273916;273917;273918;273919;273920;273921;273922;273923;273924;273925;273926;273927 217208;217209;217210;217211;217212 217209 5 LSESSASPQPK Unmodified 1129.5615 0.56151742 3354 Q8N5Y2 MSL3 Male-specific lethal 3 homolog yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching 10 0 5 1 1 1 1 1 14.791 14.926 2 0.016217 14397 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 44.425 19.288 10243000 0 0 0 0 1099200 2163200 1338300 0 0 0 0 2887000 0 0 2754900 32618 3354 29791 273928;273929;273930;273931;273932 217213 217213 1 LSESVLSPPCFVR Unmodified 1489.7599 0.75989966 3702 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 80.684 80.733 2 0.0026639 93286 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 60.064 44.798 82836000 0 0 0 3261000 3883600 5879000 0 7650000 5804100 6525100 9224100 9388100 6348700 8637100 16235000 32619 3702 29792 273933;273934;273935;273936;273937;273938;273939;273940;273941;273942;273943 217214;217215 217214 2 LSETDFK Unmodified 838.40725 0.40724861 2470 Q15007 WTAP Pre-mRNA-splicing regulator WTAP yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 30.292 30.498 2 0.039725 31979 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.915 14.39 59385000 0 0 0 4311200 3591800 3135100 0 4136800 3700800 6087200 5493100 8874200 6725200 5816200 7513500 32620 2470 29793 273944;273945;273946;273947;273948;273949;273950;273951;273952;273953;273954 217216;217217;217218 217216 3 LSETISEGTSNSLSTCTK Unmodified 1913.8888 0.88880116 472 O75179 ANKRD17 Ankyrin repeat domain-containing protein 17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 48.521 48.056 2 1.4005E-42 54289 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 148.62 134.36 70301000 0 14845000 0 0 3954300 0 4371400 0 4444200 5401800 7756000 11644000 9134500 8749600 0 32621 472 29794 273955;273956;273957;273958;273959;273960;273961;273962;273963 217219;217220;217221;217222;217223;217224;217225;217226;217227 217219 9 LSETSIK Unmodified 776.42798 0.42798405 4893 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.478 19.677 2 0.039143 20133 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 69.176 3.5036 259630000 0 0 0 13029000 18855000 16509000 17899000 13857000 14856000 26712000 29169000 43578000 23258000 17174000 24738000 32622 4893 29795 273964;273965;273966;273967;273968;273969;273970;273971;273972;273973;273974;273975 217228 217228 1 LSETSPAFR Unmodified 1006.5084 0.50835964 4727 Q9NXH9 TRMT1 tRNA (guanine(26)-N(2))-dimethyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.42 36.617 2 0.006387 39852 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 75.213 40.063 114240000 0 0 0 5221400 5132000 0 4658800 4938000 5202400 6297400 12615000 17671000 11592000 17385000 23527000 32623 4727 29796 273976;273977;273978;273979;273980;273981;273982;273983;273984;273985;273986;273987 217229;217230;217231;217232;217233;217234;217235;217236;217237;217238 217236 10 LSEVAEAIQTVK Unmodified 1286.7082 0.70818166 674 O95625 ZBTB11 Zinc finger and BTB domain-containing protein 11 yes yes 0 0 0 By MS/MS 2 0 1 1 72.984 67.439 2 3.8489E-10 85287 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.66 88.884 44873000 0 44873000 0 0 0 0 0 0 0 0 0 0 0 0 0 32624 674 29797 273988 217239 217239 1 LSEVDIDDDERPHNPHK Unmodified 2014.9344 0.93444622 2982 Q6UX04 CWC27 Peptidyl-prolyl cis-trans isomerase CWC27 homolog yes yes 0 0 1 By MS/MS 2 0 1 1 40.16 33.537 4 0.0225 46475 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 29.687 19.093 8141000 8141000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32625 2982 29798 273989 217240 217240 1 LSEVEEAQEASMETDPKP Unmodified 1988.8885 0.8884668 2881 Q6I9Y2 THOC7 THO complex subunit 7 homolog yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.43 2.06 1 13 1 2 1 1 1 1 2 1 2 2 59.589 59.353 2;3 1.9871E-54 73331 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 151.54 140.44 90252000 0 17836000 0 0 6972600 0 2868700 0 2144800 4564400 4997100 15002000 5606900 9035200 21224000 32626 2881 29799 273990;273991;273992;273993;273994;273995;273996;273997;273998;273999;274000;274001;274002;274003 217241;217242;217243;217244;217245;217246;217247;217248;217249 217242 9 LSEVEEAQEASMETDPKP Oxidation (M) 2004.8834 0.88338143 2881 Q6I9Y2 THOC7 THO complex subunit 7 homolog yes yes 0 1 1 By MS/MS 10 0 1 1 53.451 53.715 2 7.1439E-10 61051 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 88.087 79.955 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32627 2881 29799 274004 217250 217250 4520 1 LSEVLQAVTDHDIPQQLVER Unmodified 2289.1965 0.19647456 3702 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 0 0 0 By MS/MS 10 0 1 1 84.259 84.438 3 1.5193E-09 97447 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.704 63.384 12213000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12213000 32628 3702 29800 274005 217251 217251 1 LSEVVGSGK Unmodified 874.476 0.47599688 938 P11182 DBT Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 21.614 17.759 2 0.019126 23416 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.825 22.051 19186000 0 19186000 0 0 0 0 0 0 0 0 0 0 0 0 0 32629 938 29801 274006;274007 217252 217252 1 LSEYNILNNK Unmodified 1206.6245 0.62445203 2674 Q3MJ16 PLA2G4E Cytosolic phospholipase A2 epsilon yes yes 0 0 0 By MS/MS 10 0 1 1 58.422 57.748 2 0.025045 66523 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 59.597 29.43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32630 2674 29802 274008 217253 217253 1 LSFDSSPTSSTDGHSSYGLDSGFCTISR Unmodified 2967.2829 0.28285932 2039 Q00587 CDC42EP1 Cdc42 effector protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 78.212 78.321 3 6.7578E-11 89705 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 46.847 40.048 134890000 0 0 0 0 7013700 8335800 3019800 10225000 11699000 23690000 12919000 19522000 0 10119000 28342000 32631 2039 29803 274009;274010;274011;274012;274013;274014;274015;274016;274017;274018 217254;217255;217256;217257;217258 217257 5 LSFFFDGTK Unmodified 1060.5229 0.52294707 3409 Q8NCF5 NFATC2IP NFATC2-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 82.488 81.919 2 0.0038879 94478 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 112.41 63.85 248340000 15430000 0 0 8960100 13310000 23908000 15329000 13352000 18094000 27290000 25467000 23699000 12127000 16946000 34428000 32632 3409 29804 274019;274020;274021;274022;274023;274024;274025;274026;274027;274028;274029;274030;274031 217259;217260;217261;217262;217263;217264;217265;217266;217267;217268 217261 10 LSFGLEDEPLETATK Unmodified 1648.8196 0.8195826 600 O94905 ERLIN2 Erlin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 81.258 81.23 2 8.928E-19 94046 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 107.18 87.933 35237000 0 0 0 2656500 4733300 4782200 4385600 0 3683100 0 0 14996000 0 0 0 32633 600 29805 274032;274033;274034;274035;274036;274037;274038;274039 217269;217270;217271;217272;217273;217274;217275;217276;217277;217278 217278 10 LSFHQTQVSQR Unmodified 1329.6789 0.67894722 3730 Q969Z0 TBRG4 Protein TBRG4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 31.438 31.582 3 0.00074385 34407 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 64.86 54.267 115190000 0 0 0 6134500 10466000 13250000 12652000 16497000 6748000 12566000 0 19283000 6557300 0 11039000 32634 3730 29806 274040;274041;274042;274043;274044;274045;274046;274047;274048;274049 217279;217280;217281;217282;217283;217284;217285;217286 217283 6 LSFNPTQLEEQCHI Unmodified 1714.7985 0.79847001 63 CON__P02754 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.114 82.175 2 2.2359E-14 95269 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 141.95 127.8 + 169080000 0 0 0 1864700 9884800 11723000 82796000 9252700 5592100 7191800 14277000 10997000 2474900 4733600 8288700 32635 63 29807 274050;274051;274052;274053;274054;274055;274056;274057;274058;274059;274060;274061 217287;217288;217289;217290;217291;217292;217293;217294;217295;217296 217295 10 LSFPSIKPDTDQTLK Unmodified 1688.8985 0.89850163 3660 Q92785 DPF2 Zinc finger protein ubi-d4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.173 74.234 3 3.1341E-05 85621 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.973 50.915 176180000 0 0 0 7761900 7855700 21204000 8966600 14484000 15012000 15118000 13613000 13593000 14282000 15363000 28932000 32636 3660 29808 274062;274063;274064;274065;274066;274067;274068;274069;274070;274071;274072;274073 217297;217298;217299;217300;217301;217302;217303;217304;217305 217304 9 LSFQHDPETSVLVLR Unmodified 1739.9206 0.92063405 2441 Q14697 GANAB Neutral alpha-glucosidase AB yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 77.882 77.988 3 2.9501E-06 89605 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.006 79.951 183020000 0 0 0 0 3611200 8043300 4944700 9637700 7823700 12492000 16371000 18984000 6178900 13220000 81709000 32637 2441 29809 274074;274075;274076;274077;274078;274079;274080;274081;274082;274083;274084 217306;217307;217308;217309;217310;217311;217312;217313;217314;217315;217316;217317;217318 217311 13 LSFQHDPETSVLVLRK Unmodified 1868.0156 0.01559707 2441 Q14697 GANAB Neutral alpha-glucosidase AB yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 70.18 70.4 3 0.0015725 80204 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.647 34.672 21069000 0 0 0 0 0 2938000 0 0 0 0 0 0 0 0 18131000 32638 2441 29810 274085;274086 217319;217320 217320 2 LSFQNVDPLGENIR Unmodified 1600.8209 0.82092001 178 O00750 PIK3C2B Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit beta yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching 10 0 5 1 1 1 1 1 82.151 82.235 2 0.01234 95092 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 54.471 39.499 15793000 0 0 0 0 1045500 0 1452100 2073100 0 0 0 0 0 3837800 7384000 32639 178 29811 274087;274088;274089;274090;274091 217321 217321 0 LSFSQVFK Unmodified 954.51747 0.51746776 4945 Q9UJX4 ANAPC5 Anaphase-promoting complex subunit 5 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 77.255 77.096 2 0.016731 88954 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.799 8.1948 11269000 0 0 0 0 4501400 6767400 0 0 0 0 0 0 0 0 0 32640 4945 29812 274092;274093 217322;217323 217322 2 LSGAAVSTR Unmodified 860.47158 0.4715802 3123 Q7Z7F0 KIAA0907 UPF0469 protein KIAA0907 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 15.792 15.938 2 0.0047955 14627 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.676 27.071 129360000 0 0 0 7901300 5863800 10675000 0 9271600 7540900 12066000 0 17934000 0 22195000 35912000 32641 3123 29813 274094;274095;274096;274097;274098;274099;274100;274101;274102 217324;217325;217326 217324 3 LSGDQPAAR Unmodified 913.46174 0.4617438 2289 Q13428 TCOF1 Treacle protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 2 1 1 2 1 2 1 1 1 1 8.764 8.9072 2 0.0050719 6365 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 84.498 50.645 148900000 0 0 0 11276000 8392300 8597700 10645000 7677500 7208600 7929800 36704000 17463000 11112000 7865400 14031000 32642 2289 29814 274103;274104;274105;274106;274107;274108;274109;274110;274111;274112;274113;274114;274115;274116;274117 217327;217328;217329;217330;217331;217332;217333;217334;217335;217336;217337 217332 10 LSGEAFDINK Unmodified 1092.5451 0.54513908 3518 Q8TEQ6 GEMIN5 Gem-associated protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.55 1 1 4 2 1 1 1 1 55.555 50.208 2 0.0031712 64798 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.57 34.064 261830000 0 261830000 0 0 0 0 0 0 0 0 0 0 0 0 0 32643 3518 29815 274118;274119;274120;274121;274122;274123 217338;217339;217340;217341;217342;217343 217340 5 LSGEYEK Unmodified 824.3916 0.39159855 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 0 0 By MS/MS 3 0 1 1 12.327 8.936 2 0.040838 11330 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 80.229 30.205 33294000 0 33294000 0 0 0 0 0 0 0 0 0 0 0 0 0 32644 1337 29816 274124 217344 217344 1 LSGFSDILK Unmodified 978.5386 0.53859714 2068 Q02040 AKAP17A A-kinase anchor protein 17A yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 8.86 2.8 1 6 1 1 1 1 2 1 76.984 75.753 2 0.0055928 87342 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 77.318 26.686 78225000 20827000 0 0 0 0 11483000 8434400 6796000 0 16304000 0 0 0 0 14381000 32645 2068 29817 274125;274126;274127;274128;274129;274130;274131 217345;217346;217347;217348 217346 4 LSGFSFK Unmodified 784.41194 0.41194006 1256 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 64.807 58.816 2 0.039422 75803 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.297 35.547 1216200000 709360000 333320000 173540000 0 0 0 0 0 0 0 0 0 0 0 0 32646 1256 29818 274132;274133;274134 217349 217349 1 LSGGLGAGSCR Unmodified 1033.4975 0.49747738 84 CON__Q04695;Q04695 KRT17 Keratin, type I cytoskeletal 17 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 21.668 21.748 2 0.00064166 22760 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 78.556 49.18 + 193850000 0 0 0 86629000 0 7363600 12127000 3631900 0 18022000 0 0 66074000 0 0 32647 84 29819 274135;274136;274137;274138;274139;274140;274141;274142 217350;217351;217352;217353;217354;217355;217356 217355 7 LSGGPLANGENSNLSR Unmodified 1584.7856 0.78559713 2818 Q5VUA4 ZNF318 Zinc finger protein 318 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 45.454 45.586 2 4.8542E-06 50718 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 83.204 67.574 32930000 0 0 0 0 3735500 4668000 3240200 4678600 0 6975300 0 5296700 0 4335300 0 32648 2818 29820 274143;274144;274145;274146;274147;274148;274149;274150;274151 217357;217358;217359;217360;217361;217362;217363;217364;217365 217364 9 LSGGPLANGENSNLSRTK Unmodified 1813.9282 0.92823863 2818 Q5VUA4 ZNF318 Zinc finger protein 318 yes yes 0 0 1 By MS/MS 2 0 1 1 47.172 39.693 3 0.00041839 54924 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 59.502 48.868 6579400 6579400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32649 2818 29821 274152 217366 217366 1 LSGGPSSDLQNHVAAGSGQER Unmodified 2065.9777 0.97770801 202 O14686 KMT2D Histone-lysine N-methyltransferase 2D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.152 38.333 3 1.3713E-28 42068 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 102.48 91.021 134270000 0 0 0 7331900 8361300 7042700 7363800 12135000 5946600 11864000 12943000 15950000 13964000 15078000 16289000 32650 202 29822 274153;274154;274155;274156;274157;274158;274159;274160;274161;274162;274163;274164 217367;217368;217369;217370;217371;217372;217373;217374;217375;217376;217377;217378;217379 217377 12 LSGHQFENYSFK Unmodified 1455.6783 0.67827852 5290 Q9Y6M1 IGF2BP2 Insulin-like growth factor 2 mRNA-binding protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 61.745 53.489 3 0.011717 72318 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.88 33.2 9043700 9043700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32651 5290 29823 274165 217380 217380 1 LSGKPQNAPEGYQNR Unmodified 1657.8172 0.81723161 2196 Q12834 CDC20 Cell division cycle protein 20 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 20.696 20.924 3 0.001482 21577 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 48.527 39.993 52543000 0 0 0 0 4895200 0 10134000 4842500 4230100 0 8437400 0 6041000 6812200 7151300 32652 2196 29824 274166;274167;274168;274169;274170;274171;274172;274173 217381;217382;217383;217384;217385;217386;217387 217387 7 LSGLADQMVAR Oxidation (M) 1175.5969 0.59685707 655 O95400 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 yes yes 0 1 0 By matching By matching By MS/MS By matching By matching 10 0 5 1 1 1 1 1 37.979 38.47 2 0.010857 41814 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 44.318 14.063 21728000 0 0 0 0 0 0 0 3042400 0 0 5235400 4182400 4643500 0 4624700 32653 655 29825 274174;274175;274176;274177;274178 217388 217388 797 1 LSGLNAFDIAEELVK Unmodified 1617.8614 0.86138784 707 O95983 MBD3 Methyl-CpG-binding domain protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 3 1 99.672 95.005 2 2.2747E-30 118068 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 153.39 128.54 123540000 17148000 105300000 1090600 0 0 0 0 0 0 0 0 0 0 0 0 32654 707 29826 274179;274180;274181;274182;274183 217389;217390;217391;217392;217393;217394 217389 6 LSGPDDDPLHK Unmodified 1192.5724 0.57241646 3136 Q86TI2 DPP9 Dipeptidyl peptidase 9 yes yes 0 0 0 By matching By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 37.539 32.661 3 0.0018159 41245 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 61.435 45.571 294780000 21889000 262090000 10797000 0 0 0 0 0 0 0 0 0 0 0 0 32655 3136 29827 274184;274185;274186;274187 217395;217396;217397;217398 217397 4 LSGPSNSSMEDFTK Oxidation (M) 1514.6559 0.65588809 4938 Q9UJF2 RASAL2 Ras GTPase-activating protein nGAP yes yes 0 1 0 By MS/MS 2 0 1 1 38.38 33.413 2 0.027852 43639 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 42.209 32.256 9254600 0 9254600 0 0 0 0 0 0 0 0 0 0 0 0 0 32656 4938 29828 274188 217399 217399 1 LSGQLSDAR Unmodified 945.48796 0.48795855 4392 Q9H467 CUEDC2 CUE domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.932 21.139 2 0.0055785 21830 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 77.355 27.766 140860000 0 0 0 5845100 5092500 7690300 10205000 7587700 5769500 12837000 18908000 16223000 13902000 12334000 24462000 32657 4392 29829 274189;274190;274191;274192;274193;274194;274195;274196;274197;274198;274199;274200 217400;217401;217402;217403;217404;217405;217406;217407;217408;217409;217410;217411 217408 6 LSGQLSDARNK Unmodified 1187.6258 0.62584901 4392 Q9H467 CUEDC2 CUE domain-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 17.698 14.206 3 0.0058651 21008 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.862 65.116 154740000 140670000 0 14068000 0 0 0 0 0 0 0 0 0 0 0 0 32658 4392 29830 274201;274202 217412;217413 217412 1 LSGSNPYTTVTPQIINSK Unmodified 1919 6.5851E-06 356 O43707 ACTN4 Alpha-actinin-4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 4 2 24 4 2 2 2 2 2 2 2 2 2 2 2 2 2 73.799 73.106 2;3 1.3337E-276 90430 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 267.77 256.87 3901200000 0 2261900000 12319000 64357000 41964000 132520000 43751000 52345000 41415000 103840000 209990000 204770000 65703000 162640000 503720000 32659 356 29831 274203;274204;274205;274206;274207;274208;274209;274210;274211;274212;274213;274214;274215;274216;274217;274218;274219;274220;274221;274222;274223;274224;274225;274226;274227;274228;274229;274230;274231;274232 217414;217415;217416;217417;217418;217419;217420;217421;217422;217423;217424;217425;217426;217427;217428;217429;217430;217431;217432;217433;217434;217435;217436 217419 18 LSGSNPYTTVTPQIINSKWEK Unmodified 2362.2169 0.21687565 356 O43707 ACTN4 Alpha-actinin-4 yes yes 0 0 1 By MS/MS By MS/MS 6 4 1 1 1 1 80.403 76.47 3 7.5031E-83 98272 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 151.21 143.32 118340000 97574000 0 0 0 0 0 0 0 0 0 0 0 0 0 20768000 32660 356 29832 274233;274234 217437;217438 217438 2 LSGSSPIK Unmodified 787.44397 0.44396847 5402 yes yes 0 0 0 By MS/MS 10 0 1 1 24.438 24.44 2 0.047202 25894 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 47.916 5.4411 + 18763000 0 0 0 0 0 0 18763000 0 0 0 0 0 0 0 0 32661 5402 29833 274235 217439 217439 1 LSGTGSAGATIR Unmodified 1089.5778 0.57783619 1380 P36871 PGM1 Phosphoglucomutase-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 1 1 1 1 1 2 1 2 2 3 17.984 18.188 2 0.00081754 24796 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.827 41.978 44495000 0 0 0 2121500 1824400 3318700 2835500 2223100 2399800 4970700 2654600 7581400 0 4978600 9586700 32662 1380 29834 274236;274237;274238;274239;274240;274241;274242;274243;274244;274245;274246;274247;274248;274249;274250;274251 217440;217441;217442;217443;217444;217445 217441 6 LSGVEEELQR Unmodified 1158.5881 0.58806652 2977 Q6UVJ0 SASS6 Spindle assembly abnormal protein 6 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 44.647 44.822 2 0.00049971 50212 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 124.92 97.186 172900000 0 0 0 10282000 9830800 10296000 12873000 16880000 0 13770000 18032000 28989000 17284000 15603000 19056000 32663 2977 29835 274252;274253;274254;274255;274256;274257;274258;274259;274260;274261;274262;274263 217446;217447;217448;217449;217450;217451;217452;217453;217454;217455;217456;217457;217458;217459;217460 217452 15 LSGVEEELQRTK Unmodified 1387.7307 0.73070802 2977 Q6UVJ0 SASS6 Spindle assembly abnormal protein 6 homolog yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 47.353 42.561 3 0.0041995 52867 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 68.676 47.02 53427000 0 38611000 14816000 0 0 0 0 0 0 0 0 0 0 0 0 32664 2977 29836 274264;274265;274266 217461;217462;217463;217464 217462 3 LSGVQQPSEGVGGGR Unmodified 1426.7165 0.71645494 4471 Q9H9E3 COG4 Conserved oligomeric Golgi complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 32.73 32.865 2 7.1449E-07 34965 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.014 49.68 70444000 0 0 0 6505500 3307700 8246300 4314300 4419800 3821100 7693800 9130900 0 4208500 8321000 10475000 32665 4471 29837 274267;274268;274269;274270;274271;274272;274273;274274;274275;274276;274277 217465;217466;217467;217468;217469;217470;217471;217472;217473;217474;217475;217476 217469 12 LSGWGNVSK Unmodified 946.48723 0.48723027 2994 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes yes 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 38.437 38.627 2 0.010625 41697 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 64.04 41.021 134650000 0 0 0 8943500 11314000 7184000 0 8529900 11352000 9942500 13421000 16109000 11832000 17499000 18523000 32666 2994 29838 274278;274279;274280;274281;274282;274283;274284;274285;274286;274287;274288 217477;217478;217479;217480;217481;217482 217481 5 LSGYEEALK Unmodified 1008.5128 0.51277632 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.011 42.188 2 0.010772 46649 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 103.56 57.845 177830000 0 0 0 9887500 10278000 13962000 12113000 13445000 10681000 19847000 16772000 20081000 19764000 11723000 19282000 32667 2361 29839 274289;274290;274291;274292;274293;274294;274295;274296;274297;274298;274299;274300 217483;217484;217485;217486;217487;217488;217489 217488 2 LSHANSAVVLSAVK Unmodified 1394.7882 0.78816332 2178;1937 P63010;Q10567 AP2B1;AP1B1 AP-2 complex subunit beta;AP-1 complex subunit beta-1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 49.055 49.213 2;3 2.0456E-16 55271 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 94.717 88.569 1245100000 0 0 0 61491000 50245000 130450000 75531000 84825000 60908000 105370000 136600000 148020000 91395000 111820000 188430000 32668 1937;2178 29840 274301;274302;274303;274304;274305;274306;274307;274308;274309;274310;274311;274312;274313;274314;274315;274316;274317;274318;274319;274320;274321;274322;274323;274324 217490;217491;217492;217493;217494;217495;217496;217497;217498;217499;217500;217501;217502;217503;217504;217505;217506;217507;217508 217497 18 LSHDAESEREDPAPAK Unmodified 1750.8122 0.81220581 3657 Q92766 RREB1 Ras-responsive element-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 2 24 1 1 2 2 2 2 2 2 2 2 2 2 2 2 13.681 13.575 3;4 0.00024006 12770 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 65.472 57.347 334530000 5791900 0 11239000 19304000 15438000 20975000 16908000 19585000 20374000 31325000 18716000 36361000 35288000 30876000 52345000 32669 3657 29841 274325;274326;274327;274328;274329;274330;274331;274332;274333;274334;274335;274336;274337;274338;274339;274340;274341;274342;274343;274344;274345;274346;274347;274348;274349;274350 217509;217510;217511;217512;217513;217514;217515;217516;217517;217518;217519;217520;217521 217509 13 LSHEDDHILEDAGSSDISSDAACTNPNK Unmodified 2997.2894 0.28940126 3631 Q92576 PHF3 PHD finger protein 3 yes yes 0 0 0 By MS/MS By matching By MS/MS 7.33 3.77 1 2 1 1 1 58.641 56.11 4 2.3322E-11 63640 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.662 48.388 18812000 5564100 0 0 0 0 4358700 0 0 0 0 0 0 0 0 8888800 32670 3631 29842 274351;274352;274353 217522;217523 217522 2 LSHEGPGSELPAGALYR Unmodified 1752.8795 0.87949752 2391 Q14203 DCTN1 Dynactin subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.75 60.854 3 4.9162E-05 68655 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 58.671 51.469 119750000 0 0 0 4074300 4837500 12192000 5951400 9118000 4258100 13047000 13987000 10869000 9278200 9968600 22169000 32671 2391 29843 274354;274355;274356;274357;274358;274359;274360;274361;274362;274363;274364;274365 217524;217525;217526;217527;217528;217529;217530 217527 7 LSHEGPGSELPAGALYRK Unmodified 1880.9745 0.97446054 2391 Q14203 DCTN1 Dynactin subunit 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 62.291 54.82 3;4 0.00034874 73697 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.053 41.234 220980000 202500000 18480000 0 0 0 0 0 0 0 0 0 0 0 0 0 32672 2391 29844 274366;274367;274368 217531;217532;217533;217534 217533 3 LSHEHQAYR Unmodified 1139.5472 0.54720476 1632 P50583 NUDT2 Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical] yes yes 0 0 0 By matching By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 5.8539 5.9478 3 0.022697 3752 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 46.001 22.629 4996200 0 0 0 1228800 0 1804600 0 0 0 0 1737100 0 0 225690 0 32673 1632 29845 274369;274370;274371;274372 217535 217535 1 LSHETVTIELK Unmodified 1268.6976 0.69761697 1893 P62314 SNRPD1 Small nuclear ribonucleoprotein Sm D1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.22 0.416 7 2 4 2 3 59.954 54.152 2;3 4.6095E-23 66881 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 232.79 201.03 324080000 163050000 18707000 142320000 0 0 0 0 0 0 0 0 0 0 0 0 32674 1893 29846 274373;274374;274375;274376;274377;274378;274379;274380;274381 217536;217537;217538;217539;217540;217541;217542;217543;217544 217544 6 LSHLKPSSEGLAIVTK Unmodified 1678.9618 0.96177059 916 P10155 TROVE2 60 kDa SS-A/Ro ribonucleoprotein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 2 2 2 1 2 53.778 54.225 3;4 0.0060472 60346 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 30.083 18.821 79308000 0 0 0 0 0 0 0 10080000 0 0 10108000 22773000 6315200 0 30032000 32675 916 29847 274382;274383;274384;274385;274386;274387;274388;274389;274390 217545;217546 217545 2 LSHLLSEKPEDK Unmodified 1394.7405 0.74054442 3730 Q969Z0 TBRG4 Protein TBRG4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 27.247 27.756 3 0.0045789 29081 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 50.897 34.519 49875000 0 0 0 0 0 0 0 0 0 0 0 12624000 11865000 11683000 13704000 32676 3730 29848 274391;274392;274393;274394;274395 217547;217548;217549;217550 217548 4 LSHMPLPPASNPPGTVHSAPNR Unmodified 2276.1484 0.14841893 3155 Q86UU0 BCL9L B-cell CLL/lymphoma 9-like protein yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 53.34 53.443 4 0.0053652 60215 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 26.417 17.923 37478000 0 0 0 0 3033300 0 3120300 0 0 0 0 0 0 8467800 22856000 32677 3155 29849 274396;274397;274398;274399 217551;217552 217552 2 LSHMPPLPLNPSSNPTSLNTAPPVQR Oxidation (M) 2780.4279 0.42794784 165 O00512 BCL9 B-cell CLL/lymphoma 9 protein yes yes 0 1 0 By matching By MS/MS By MS/MS 10 0 4 1 1 2 75.799 76.014 3 2.6532E-19 87433 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.302 65.191 31932000 0 0 0 0 0 0 4947900 0 0 6939600 0 0 0 0 20045000 32678 165 29850 274400;274401;274402;274403 217553;217554;217555 217554 230 3 LSHRPQPELLK Unmodified 1316.7565 0.75646926 4028 Q99583 MNT Max-binding protein MNT yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 30.471 30.727 3 0.0061706 33229 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 39.394 18.335 79705000 0 0 0 0 0 6968600 5688300 5885300 9105500 9812200 7390700 0 7932900 7866300 19056000 32679 4028 29851 274404;274405;274406;274407;274408;274409;274410;274411;274412 217556;217557;217558;217559;217560;217561 217556 6 LSHYLQK Unmodified 887.4865 0.48650199 1061 P17812 CTPS1 CTP synthase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 15.404 15.514 2 0.04604 15114 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 66.087 23.858 52914000 0 0 0 2250700 2190500 4084600 4131900 4771500 3124400 5274000 9219600 0 7890100 9976600 0 32680 1061 29852 274413;274414;274415;274416;274417;274418;274419;274420;274421;274422 217562;217563 217563 2 LSIAVEQAK Unmodified 957.5495 0.54949617 4472 Q9H9F9 ACTR5 Actin-related protein 5 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 43.501 43.948 2 0.04445 48155 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.442 2.7562 20550000 0 0 0 0 0 0 0 0 0 0 0 0 6041900 6425200 8083100 32681 4472 29853 274423;274424;274425 217564 217564 1 LSIEGRSNAGK Unmodified 1130.6044 0.60438529 900 P0C7T5 ATXN1L Ataxin-1-like yes yes 0 0 1 By MS/MS 2 0 1 1 23.263 18.338 2 0.024274 26164 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.525 28.588 3637600 3637600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32682 900 29854 274426 217565 217565 1 LSIFDANESGFESYEALPQHK Unmodified 2381.1176 0.11755554 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 4.83 3.67 3 1 2 1 2 1 1 1 86.288 83.25 3 3.9942E-13 104296 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.967 74.694 96983000 27185000 50132000 6299100 0 0 0 0 0 0 0 5870600 0 0 0 7496200 32683 1201 29855 274427;274428;274429;274430;274431;274432 217566;217567;217568;217569;217570 217567 5 LSILNMLMK Oxidation (M) 1077.5926 0.59262332 5391 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 2 1 1 1 1 1 63.931 64.034 2 0.003243 73334 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 85.265 64.266 + 130280000 0 0 0 8571300 0 16512000 11312000 0 17199000 15070000 12559000 20730000 16096000 12232000 0 32684 5391 29856 274433;274434;274435;274436;274437;274438;274439;274440;274441;274442 217571;217572;217573;217574;217575;217576;217577;217578;217579;217580 217575 6764;6765 9 LSILYPATTGR Unmodified 1190.6659 0.66592292 1261 P30041 PRDX6 Peroxiredoxin-6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.332 70.406 2 0.013991 80797 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 46.001 9.5547 722970000 0 0 0 23038000 16890000 21302000 27983000 22904000 14973000 32212000 100660000 87623000 21806000 76294000 277290000 32685 1261 29857 274443;274444;274445;274446;274447;274448;274449;274450;274451;274452;274453;274454 217581;217582;217583;217584;217585;217586 217585 5 LSILYPATTGRNFDEILRVVISLQLTAEK Unmodified 3259.818 0.81801347 1261 P30041 PRDX6 Peroxiredoxin-6 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 103.34 98.855 4 7.7121E-08 123470 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.029 33.582 14024000 8108600 3842800 2072200 0 0 0 0 0 0 0 0 0 0 0 0 32686 1261 29858 274455;274456;274457;274458;274459 217587;217588;217589;217590;217591 217590 5 LSIMIEECGGLDK Oxidation (M) 1479.6949 0.69491614 1682 P52292 KPNA2 Importin subunit alpha-1 yes yes 0 1 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 76.111 70.464 2 0.0018297 89384 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.954 66.7 34781000 15354000 19427000 0 0 0 0 0 0 0 0 0 0 0 0 0 32687 1682 29859 274460;274461;274462 217592;217593;217594 217593 2728 3 LSIMIEECGGLDK Unmodified 1463.7 0.70000151 1682 P52292 KPNA2 Importin subunit alpha-1 yes yes 0 0 0 By MS/MS 2 0 1 1 81.4 73.269 2 2.2406E-18 95964 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 132.32 118.02 12366000 12366000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32688 1682 29859 274463 217595;217596 217595 2 LSIMTSENHLNNSDK Oxidation (M) 1717.7941 0.79411291 3735 Q96AC1 FERMT2 Fermitin family homolog 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 7.53 3.65 5 1 13 2 2 2 1 1 2 1 1 1 2 2 1 1 36.904 35.505 3 0.00011332 48712 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.24 72.438 352450000 93608000 77750000 57527000 3803900 0 12333000 17102000 5121100 0 10969000 5690000 18618000 25078000 10973000 13877000 32689 3735 29860 274464;274465;274466;274467;274468;274469;274470;274471;274472;274473;274474;274475;274476;274477;274478;274479;274480;274481;274482 217597;217598;217599;217600;217601;217602;217603;217604;217605;217606;217607;217608;217609;217610 217603 5307 10 LSIMTSENHLNNSDK Unmodified 1701.7992 0.79919829 3735 Q96AC1 FERMT2 Fermitin family homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 46.803 45.515 3 9.2263E-57 63221 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 169.04 156.24 474920000 168840000 90321000 50313000 5294500 5048600 25674000 8881300 9093100 7426900 18628000 19254000 12243000 8581200 16540000 28781000 32690 3735 29860 274483;274484;274485;274486;274487;274488;274489;274490;274491;274492;274493;274494;274495;274496;274497;274498 217611;217612;217613;217614;217615;217616;217617;217618;217619;217620;217621 217617 9 LSIPTYGLQCTR Unmodified 1407.718 0.71803484 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 75.117 75.281 2 0.0019788 86777 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 64.374 45.417 293420000 0 0 0 0 0 35204000 0 0 0 37125000 40715000 48382000 0 41057000 90940000 32691 1565 29861 274499;274500;274501;274502;274503;274504;274505 217622;217623;217624;217625;217626 217624 4 LSITGTYDLK Unmodified 1109.5968 0.5968403 739 P01009 SERPINA1 Alpha-1-antitrypsin;Short peptide from AAT yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 66.248 66.136 2 0.022012 75680 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 46.334 30.672 6013900 0 0 0 2431400 0 0 0 2965600 616870 0 0 0 0 0 0 32692 739 29862 274506;274507;274508 217627 217627 1 LSITSLTGK Unmodified 918.5386 0.53859714 3017 Q6ZUT9 DENND5B DENN domain-containing protein 5B yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 63.037 63.106 2 0.045538 72245 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 43.185 15.868 23945000 0 0 0 0 6756700 0 4379700 0 0 0 0 7368300 0 5440300 0 32693 3017 29863 274509;274510;274511;274512 217628 217628 1 LSIVPVR Unmodified 782.50142 0.50142377 1027 P15880 RPS2 40S ribosomal protein S2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 57.167 57.288 2 0.023344 64794 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 91.584 38.901 255050000 0 0 0 13944000 24035000 18071000 16819000 13294000 6608400 20604000 21030000 34408000 27233000 24058000 34951000 32694 1027 29864 274513;274514;274515;274516;274517;274518;274519;274520;274521;274522;274523;274524 217629;217630;217631;217632;217633;217634;217635;217636;217637 217629 9 LSIVPVRR Unmodified 938.60253 0.6025348 1027 P15880 RPS2 40S ribosomal protein S2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 44.525 44.697 2 0.039083 49271 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 113.7 54.715 240950000 0 0 0 13253000 18203000 16402000 13837000 16613000 13527000 16437000 18210000 26782000 30390000 24650000 32645000 32695 1027 29865 274525;274526;274527;274528;274529;274530;274531;274532;274533;274534;274535;274536 217638;217639;217640;217641;217642;217643;217644;217645;217646 217645 9 LSLAQEDLISNR Unmodified 1357.7201 0.72014333 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 69.053 69.348 2 2.5483E-05 78964 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 114.89 83.472 35767000 0 0 0 0 0 0 0 0 0 0 5270600 6496700 3233600 4635000 16131000 32696 2495 29866 274537;274538;274539;274540;274541 217647;217648;217649;217650 217647 4 LSLAQEDLISNRNQIGNQNK Unmodified 2254.1666 0.16657142 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 1 By MS/MS By matching By MS/MS 7.33 3.77 1 2 1 1 1 68.447 65.974 3 3.1376E-103 87376 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 173.87 161.39 63731000 52879000 0 0 0 0 0 0 0 1898000 0 0 0 0 0 8954300 32697 2495 29867 274542;274543;274544 217651;217652 217652 2 LSLCGEESFGTGSDHIREK Unmodified 2120.9797 0.97968185 1380 P36871 PGM1 Phosphoglucomutase-1 yes yes 0 0 1 By MS/MS By MS/MS 2.17 0.687 1 3 2 4 2 70.957 66.421 3;4 6.4465E-36 95358 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 125.18 111.75 233600000 136420000 97178000 0 0 0 0 0 0 0 0 0 0 0 0 0 32698 1380 29868 274545;274546;274547;274548;274549;274550 217653;217654;217655;217656;217657;217658;217659 217655 6 LSLDDFPDNK Unmodified 1162.5506 0.55061839 4288 Q9C0D5 TANC1 Protein TANC1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 66.968 66.007 2 0.014647 82721 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.338 43.939 68300000 0 30064000 0 0 3123300 4312600 1895100 0 2575800 0 6542400 9857900 5260700 4668000 0 32699 4288 29869 274551;274552;274553;274554;274555;274556;274557;274558;274559;274560 217660;217661;217662;217663;217664 217660 5 LSLDDLLQR Unmodified 1071.5924 0.59242362 1224 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 85.02 85.119 2 0.0077155 98298 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.692 26.611 38563000 0 0 0 0 2056000 4510200 2306300 0 2369500 3500600 3753700 4642100 0 3274800 12150000 32700 1224 29870 274561;274562;274563;274564;274565;274566;274567;274568;274569 217665;217666;217667;217668;217669 217666 5 LSLDELTK Unmodified 917.50696 0.50696266 5061 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 66.421 65.536 2 0.015746 74218 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.383 16.952 199440000 0 150490000 5433600 0 2176400 4534800 2593300 3634500 1913700 4743400 3507200 3849100 3386200 5417900 7755900 32701 5061 29871 274570;274571;274572;274573;274574;274575;274576;274577;274578;274579;274580;274581;274582;274583 217670;217671;217672;217673;217674 217672 5 LSLDLLSQMSPGDLAK Oxidation (M) 1702.8811 0.881137 2979 Q6UWE0 LRSAM1 E3 ubiquitin-protein ligase LRSAM1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 84.722 84.876 2 0.00022171 98325 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 66.262 53.307 13126000 0 0 0 0 0 0 0 0 0 3891100 2745000 2497400 0 0 3992300 32702 2979 29872 274584;274585;274586;274587 217675;217676;217677 217675 4596 3 LSLEEETLWLR Unmodified 1387.7347 0.73473076 2465 Q14CX7 NAA25 N-alpha-acetyltransferase 25, NatB auxiliary subunit yes yes 0 0 0 By MS/MS 10 0 1 1 87.423 87.617 2 0.0052806 101171 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 59.426 43.844 4124900 0 0 0 0 0 0 0 0 4124900 0 0 0 0 0 0 32703 2465 29873 274588 217678 217678 1 LSLEEFIR Unmodified 1005.5495 0.54949617 1388 P37235;P84074;P61601 HPCAL1;HPCA;NCALD Hippocalcin-like protein 1;Neuron-specific calcium-binding protein hippocalcin;Neurocalcin-delta yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 84.964 85.1 2 0.015996 98251 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.981 29.018 63076000 0 0 0 0 0 7135500 0 5937800 7228900 7263200 8126900 8547700 3103200 3809500 11924000 32704 1388 29874 274589;274590;274591;274592;274593;274594;274595;274596;274597 217679;217680;217681 217679 3 LSLEFPSGYPYNAPTVK Unmodified 1881.9513 0.95126548 179 O00762 UBE2C Ubiquitin-conjugating enzyme E2 C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 86.427 85.286 2 1.5727E-06 98697 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 99.531 71.354 99182000 0 72446000 0 0 0 3561600 0 0 0 8007400 0 0 0 0 15167000 32705 179 29875 274598;274599;274600;274601 217682;217683;217684;217685 217685 4 LSLEGDHSTPPSAYGSVK Unmodified 1843.8952 0.89520716 840 P07355;A6NMY6 ANXA2;ANXA2P2 Annexin A2;Putative annexin A2-like protein yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.81 3.5 7 2 23 2 5 2 2 1 1 2 2 2 2 2 2 2 2 3 54.093 52.631 2;3 2.4264E-250 67757 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 261.67 236.28 3431000000 127310000 2506800000 215600000 68208000 35717000 25635000 48139000 47434000 19598000 43445000 59439000 55036000 39349000 40465000 98892000 32706 840 29876 274602;274603;274604;274605;274606;274607;274608;274609;274610;274611;274612;274613;274614;274615;274616;274617;274618;274619;274620;274621;274622;274623;274624;274625;274626;274627;274628;274629;274630;274631;274632;274633 217686;217687;217688;217689;217690;217691;217692;217693;217694;217695;217696;217697;217698;217699;217700;217701;217702;217703;217704;217705;217706;217707;217708;217709;217710;217711;217712;217713;217714;217715;217716;217717;217718;217719;217720;217721 217694 32 LSLEGERQPK Unmodified 1155.6248 0.62478638 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 25.902 26.102 2;3 0.0010511 27663 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 105.2 79.722 796580000 0 0 0 50207000 51474000 55483000 54758000 79711000 46913000 71623000 51414000 113950000 85963000 56641000 78444000 32707 1364 29877 274634;274635;274636;274637;274638;274639;274640;274641;274642;274643;274644;274645;274646;274647;274648;274649;274650;274651;274652;274653;274654;274655;274656;274657 217722;217723;217724;217725;217726;217727;217728;217729;217730;217731;217732;217733;217734 217728 9 LSLEGIVVQR Unmodified 1112.6554 0.65535823 992 P13984 GTF2F2 General transcription factor IIF subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.695 77.753 2 2.5116E-09 89846 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 157.86 59.561 344330000 0 0 0 11690000 15966000 25384000 21378000 25557000 22488000 39157000 37921000 39538000 24845000 22503000 57902000 32708 992 29878 274658;274659;274660;274661;274662;274663;274664;274665;274666;274667;274668;274669 217735;217736;217737;217738;217739;217740;217741;217742;217743;217744;217745;217746;217747 217747 13 LSLEPLPCYQLELDAAVAEVK Unmodified 2357.2188 0.21884949 3975 Q96RS6 NUDCD1 NudC domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 2 1 1 1 1 98.286 93.654 2;3 0.00015364 117076 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 100.13 88.334 18876000 14986000 1988000 1901900 0 0 0 0 0 0 0 0 0 0 0 0 32709 3975 29879 274670;274671;274672 217748;217749;217750 217749 3 LSLEQALPPEPK Unmodified 1320.7289 0.7289171 5037 Q9UNN5 FAF1 FAS-associated factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 74.297 74.346 2 0.00099499 85571 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 84.658 80.207 73459000 0 0 0 3083400 3830300 5712400 5433800 0 2654500 10153000 9191700 6489900 6660800 7439000 12811000 32710 5037 29880 274673;274674;274675;274676;274677;274678;274679;274680;274681;274682;274683 217751;217752;217753;217754;217755;217756;217757;217758;217759 217758 9 LSLGQYDNDAGGQLPFSK Unmodified 1908.9218 0.92175626 2854 Q68CZ2 TNS3 Tensin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 80.733 80.205 2 4.0552E-76 98706 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 183.81 162.13 142180000 0 76635000 0 0 3376200 5866600 3905500 4757400 4757100 7049800 5322600 7314800 5092900 4945900 13160000 32711 2854 29881 274684;274685;274686;274687;274688;274689;274690;274691;274692;274693;274694;274695;274696 217760;217761;217762;217763;217764;217765;217766;217767;217768;217769;217770;217771;217772 217763 13 LSLLDQRDLETDEVEEFLENK Unmodified 2534.2388 0.23879289 222 O14867 BACH1 Transcription regulator protein BACH1 yes yes 0 0 1 By MS/MS 2 0 1 1 97.024 88.894 3 5.8769E-18 114815 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 103.27 90.715 11885000 11885000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32712 222 29882 274697 217773 217773 1 LSLLEVGCGTGANFK Unmodified 1564.7919 0.79192806 4450 Q9H8H3 METTL7A Methyltransferase-like protein 7A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 80.84 80.937 2 2.9223E-28 93514 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 142.07 115.55 82018000 0 0 0 0 7065900 6603800 5392100 10993000 7707800 9585600 11880000 0 8607900 0 14182000 32713 4450 29883 274698;274699;274700;274701;274702;274703;274704;274705;274706 217774;217775;217776;217777;217778;217779;217780;217781;217782 217780 9 LSLLLNDISR Unmodified 1142.6659 0.66592292 2557 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.881 81.942 2 7.4038E-05 94616 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 143.7 81.741 351720000 0 0 0 10984000 16374000 36081000 26380000 21855000 14243000 48424000 33593000 43679000 22592000 33075000 44439000 32714 2557 29884 274707;274708;274709;274710;274711;274712;274713;274714;274715;274716;274717;274718 217783;217784;217785;217786;217787;217788;217789;217790;217791;217792;217793;217794 217785 12 LSLLLNDISRK Unmodified 1270.7609 0.76088593 2557 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.68 1.57 1 24 1 2 2 2 2 2 2 2 2 2 2 2 2 74.417 74.15 2;3 5.1753E-17 84793 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 172.88 77.782 619570000 5268300 0 0 19245000 13266000 90102000 27571000 42132000 49535000 60724000 35885000 58149000 39521000 42776000 135400000 32715 2557 29885 274719;274720;274721;274722;274723;274724;274725;274726;274727;274728;274729;274730;274731;274732;274733;274734;274735;274736;274737;274738;274739;274740;274741;274742;274743 217795;217796;217797;217798;217799;217800;217801;217802;217803;217804;217805;217806;217807;217808;217809;217810;217811 217801 13 LSLLSSTSK Unmodified 934.53351 0.53351176 812;3118 Q7Z6R9;Q92754;Q92481;P05549;Q6VUC0 TFAP2D;TFAP2C;TFAP2B;TFAP2A;TFAP2E Transcription factor AP-2-delta;Transcription factor AP-2 gamma;Transcription factor AP-2-beta;Transcription factor AP-2-alpha;Transcription factor AP-2-epsilon no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.334 47.498 2 0.004238 52413 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 87.476 52.371 138500000 0 0 0 5868600 7593500 12763000 8841000 9061500 6478400 15004000 15165000 14304000 10607000 11100000 21710000 32716 3118;812 29886 274744;274745;274746;274747;274748;274749;274750;274751;274752;274753;274754;274755 217812;217813;217814;217815;217816;217817;217818;217819;217820;217821;217822;217823 217819 10 LSLLVLR Unmodified 812.54837 0.54837396 616 O95049 TJP3 Tight junction protein ZO-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.895 80.955 2 0.017142 93891 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 114.54 60.014 104300000 0 0 0 9404000 6742600 11591000 6878400 4960600 7587500 12113000 6982600 11358000 7092400 5817900 13774000 32717 616 29887 274756;274757;274758;274759;274760;274761;274762;274763;274764;274765;274766;274767 217824;217825;217826;217827;217828;217829;217830;217831;217832;217833 217831 10 LSLMQSLDDATK Unmodified 1320.6595 0.65951691 2977 Q6UVJ0 SASS6 Spindle assembly abnormal protein 6 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 78.39 78.54 2 0.0012601 90307 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.346 44.57 45402000 0 0 0 0 0 2898600 0 3796700 1951900 7246000 5303500 11299000 0 4727900 8178600 32718 2977 29888 274768;274769;274770;274771;274772;274773;274774;274775 217834;217835;217836;217837;217838;217839;217840;217841 217836 8 LSLMQSLDDATK Oxidation (M) 1336.6544 0.65443153 2977 Q6UVJ0 SASS6 Spindle assembly abnormal protein 6 homolog yes yes 0 1 0 By MS/MS 2 0 1 1 69.361 63.493 2 0.0061863 80971 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.786 54.648 12364000 0 12364000 0 0 0 0 0 0 0 0 0 0 0 0 0 32719 2977 29888 274776 217842 217842 4594 1 LSLMYAR Oxidation (M) 868.44767 0.44767364 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 44.753 44.987 2 0.027897 49692 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 67.741 22.768 148330000 0 0 0 11671000 0 11854000 14626000 9802100 12057000 13560000 18444000 17711000 6960200 12802000 18846000 32720 1986 29889 274777;274778;274779;274780;274781;274782;274783;274784;274785;274786;274787 217843;217844;217845;217846;217847;217848;217849 217847 7 LSLNIDPDAK Unmodified 1084.5764 0.57643921 1002 P14625 HSP90B1 Endoplasmin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 2 1 1 1 1 1 1 1 64.741 64.836 2 0.00043088 73487 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 128.86 64.1 1721400000 0 0 0 78361000 64734000 156090000 117460000 90863000 89081000 152450000 204090000 178040000 135280000 142000000 312980000 32721 1002 29890 274788;274789;274790;274791;274792;274793;274794;274795;274796;274797;274798;274799;274800 217850;217851;217852;217853;217854;217855;217856;217857;217858;217859;217860;217861 217857 5 LSLNLDHK Unmodified 938.51853 0.5185304 414 O60568 PLOD3 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.2 3.92 3 2 1 1 1 1 1 46.129 42.834 2 0.0088146 45776 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.916 28.194 65373000 26373000 21988000 9451100 0 0 0 0 0 0 0 0 0 0 2992500 4568500 32722 414 29891 274801;274802;274803;274804;274805 217862;217863;217864;217865 217863 4 LSLPQNETVADTTLTK Unmodified 1729.9098 0.90979459 4505 Q9HC35 EML4 Echinoderm microtubule-associated protein-like 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.18 3.74 3 1 7 1 2 1 1 1 1 1 1 1 1 71.571 70.426 2 2.8769E-41 87498 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 146.5 128.23 964220000 0 794480000 4595400 9973100 0 0 0 0 14886000 33077000 24837000 0 19604000 27048000 35726000 32723 4505 29892 274806;274807;274808;274809;274810;274811;274812;274813;274814;274815;274816 217866;217867;217868;217869;217870 217867 5 LSLQDAVSQGVIDQDMATR Oxidation (M) 2062.0001 8.29396E-05 1029 P15924 DSP Desmoplakin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 2 1 2 2 1 2 1 2 2 2 2 78.808 78.881 2;3 5.6864E-31 91121 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 106.14 85.677 327700000 0 0 0 9640000 37771000 8111400 23899000 41999000 7954000 39392000 24392000 42021000 31761000 27220000 33536000 32724 1029 29893 274817;274818;274819;274820;274821;274822;274823;274824;274825;274826;274827;274828;274829;274830;274831;274832;274833;274834;274835;274836 217871;217872;217873;217874;217875;217876;217877;217878;217879;217880;217881;217882;217883;217884;217885 217871 1436 15 LSLQDAVSQGVIDQDMATR Unmodified 2046.0052 0.0051683175 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS 10 0 1 1 82.936 83.128 2 0.00074316 96238 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 48.704 36.344 3017400 0 0 0 0 0 0 0 3017400 0 0 0 0 0 0 0 32725 1029 29893 274837 217886 217886 1 LSLQEQDAAIVK Unmodified 1313.7191 0.7190807 5278 Q9Y6D9 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 60.755 60.084 2 2.8515E-08 68518 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 132.01 86.642 591380000 0 244250000 0 11539000 16994000 17706000 29236000 20680000 18440000 32445000 42168000 34779000 33026000 31215000 58893000 32726 5278 29894 274838;274839;274840;274841;274842;274843;274844;274845;274846;274847;274848;274849;274850;274851 217887;217888;217889;217890;217891;217892;217893;217894;217895;217896;217897;217898;217899;217900 217895 13 LSLQESESK Unmodified 1019.5135 0.5135046 4605 Q9NRL2 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 26.596 25.792 2 0.0012408 32317 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.06 81.101 59076000 0 41573000 0 0 3759500 4021000 3583300 0 0 0 0 0 0 0 6139400 32727 4605 29895 274852;274853;274854;274855;274856 217901;217902;217903;217904 217902 4 LSLQGHPTDLQTSNVK Unmodified 1736.9057 0.90571227 4809 Q9P270 SLAIN2 SLAIN motif-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 49.408 49.226 3 0.013388 56077 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 19.443 11.982 13229000 0 0 0 0 6502100 0 0 6726700 0 0 0 0 0 0 0 32728 4809 29896 274857;274858 217905 217905 1 LSLQQPR Unmodified 840.48175 0.48175096 3657 Q92766 RREB1 Ras-responsive element-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.737 32.921 2 0.02139 35874 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 106.76 56.641 294550000 0 0 0 27518000 18407000 20457000 20791000 22131000 16670000 27757000 26562000 35690000 32425000 20364000 25780000 32729 3657 29897 274859;274860;274861;274862;274863;274864;274865;274866;274867;274868;274869;274870 217906;217907;217908;217909;217910;217911;217912;217913;217914;217915 217907 10 LSLQQVIK Unmodified 927.57532 0.57531699 4179 Q9BV73 CEP250 Centrosome-associated protein CEP250 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 69.179 69.283 2 0.032623 78688 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 54.205 23.593 11420000 0 0 0 0 1021700 1545700 0 890350 992490 0 1708800 1923000 1641400 1696400 0 32730 4179 29898 274871;274872;274873;274874;274875;274876;274877;274878 217916 217916 1 LSLSAETQDFAGESEVDEIEAALSNLEVTLEGGK Unmodified 3550.705 0.70501294 4100 Q9BQL6 FERMT1 Fermitin family homolog 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 105.37 98.925 3 1.5525E-33 124601 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.054 78.049 23117000 17413000 5703500 0 0 0 0 0 0 0 0 0 0 0 0 0 32731 4100 29899 274879;274880 217917;217918 217918 2 LSLSEGGLVPSSK Unmodified 1272.6925 0.6925316 3554 Q8WUX9 CHMP7 Charged multivesicular body protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 67.873 66.969 2 0.0011778 76798 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 80.245 42.517 376390000 0 196890000 0 0 15331000 0 24102000 0 18429000 24769000 27989000 0 25660000 16697000 26520000 32732 3554 29900 274881;274882;274883;274884;274885;274886;274887;274888;274889;274890 217919;217920;217921;217922;217923;217924;217925;217926 217923 4 LSLSSGTK Unmodified 791.43888 0.43888309 2888 Q6IN85 SMEK1 Serine/threonine-protein phosphatase 4 regulatory subunit 3A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 22.02 22.323 2 0.046864 23261 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 48.036 21.813 46243000 0 0 0 0 0 0 2874400 0 2673800 6410000 7840000 0 8786400 7025700 10633000 32733 2888 29901 274891;274892;274893;274894;274895;274896;274897 217927 217927 1 LSLSTGAPQEPAFSGEEAK Unmodified 1917.932 0.9319866 609 O94953 KDM4B Lysine-specific demethylase 4B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 68.828 68.844 2 0.002912 78522 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.001 31.75 37061000 0 0 0 3137500 3047100 3833100 3878000 3193100 2947900 0 0 0 4410900 5026400 7587400 32734 609 29902 274898;274899;274900;274901;274902;274903;274904;274905;274906 217928;217929;217930;217931 217928 4 LSLTDNQIVSK Unmodified 1216.6663 0.66631685 5193 Q9Y4C1 KDM3A Lysine-specific demethylase 3A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.478 58.593 2 0.0002862 66719 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 103.88 45.948 130990000 0 0 0 6708300 13094000 8766100 14277000 12778000 9347400 9391200 12455000 12912000 12640000 7186800 11433000 32735 5193 29903 274907;274908;274909;274910;274911;274912;274913;274914;274915;274916;274917;274918 217932;217933;217934;217935;217936;217937;217938;217939;217940;217941;217942;217943 217940 12 LSLTQDPVVK Unmodified 1098.6285 0.62847478 686 O95757 HSPA4L Heat shock 70 kDa protein 4L yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.12 3.89 3 1 4 1 2 1 1 1 1 1 60.331 57.193 2 1.1904E-28 76590 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 201.58 148.41 1272900000 26269000 1056800000 11009000 0 0 58880000 0 0 0 49802000 0 70102000 0 0 0 32736 686 29904 274919;274920;274921;274922;274923;274924;274925;274926 217944;217945;217946;217947;217948;217949;217950;217951;217952;217953;217954;217955 217950 12 LSLTSDPEEGDPLALGPESPGEPQPPQLK Unmodified 2997.4819 0.4818767 2768 Q5T1M5 FKBP15 FK506-binding protein 15 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 86.67 86.803 3 8.1416E-05 100587 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 29.346 26.568 11422000 0 0 0 0 0 0 0 0 0 5302000 0 0 0 0 6119700 32737 2768 29905 274927;274928 217956;217957 217956 2 LSLVDLAGSER Unmodified 1158.6245 0.62445203 4576 Q9NQT8 KIF13B Kinesin-like protein KIF13B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 75.607 75.57 2 0.00076664 87226 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 77.379 0 95702000 0 0 0 19175000 0 24383000 21288000 0 0 0 30856000 0 0 0 0 32738 4576 29906 274929;274930;274931;274932 217958;217959;217960 217958 3 LSMAEINSGR Oxidation (M) 1092.5234 0.52335778 5382 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By matching 10 0 14 2 2 2 1 2 1 1 1 1 1 17.356 17.448 2 0.0041873 17490 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 65.252 33.963 + 58602000 0 0 0 9652200 6531400 20291000 3576300 6902400 0 1701300 2307700 3304100 2240700 2094000 0 32739 5382 29907 274933;274934;274935;274936;274937;274938;274939;274940;274941;274942;274943;274944;274945;274946 217961;217962;217963;217964;217965 217962 6759 4 LSMEHADGK Unmodified 986.44913 0.4491302 5203 Q9Y4H2 IRS2 Insulin receptor substrate 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 13.022 13.17 2 0.012256 12414 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 61.582 48.315 32800000 0 0 0 0 2069500 2492300 4945400 0 0 6062600 0 4639500 3754700 4049400 4786200 32740 5203 29908 274947;274948;274949;274950;274951;274952;274953;274954 217966 217966 1 LSMEHADGK Oxidation (M) 1002.444 0.44404482 5203 Q9Y4H2 IRS2 Insulin receptor substrate 2 yes yes 0 1 0 By matching By MS/MS 2 0 2 1 1 5.6952 2.3863 2 0.013745 4372 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.676 43.118 80830000 41522000 39308000 0 0 0 0 0 0 0 0 0 0 0 0 0 32741 5203 29908 274955;274956 217967 217967 6600 1 LSMESDIALMIK Oxidation (M) 1365.6884 0.6883742 5331 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 2 49.356 49.612 2 0.0051292 54736 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.715 32.279 + 24024000000 0 0 0 0 2410500000 5999300000 0 0 5655500000 1876000000 2469400000 0 1858500000 0 3754400000 32742 5331 29909 274957;274958;274959;274960;274961;274962;274963;274964 217968;217969;217970;217971 217969 6726;6727 3 LSMFVLLPSHSK Oxidation (M) 1373.7377 0.73770765 3945 Q96P63 SERPINB12 Serpin B12 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 2 1 69.376 69.601 2;3 0.00098628 80541 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 80.318 80.318 36143000 0 0 0 0 0 0 0 2354100 6920900 0 7163700 4000400 15704000 0 0 32743 3945 29910 274965;274966;274967;274968;274969;274970 217972;217973;217974;217975;217976 217975 5425 1 LSMFVLLPSHSK Unmodified 1357.7428 0.74279303 3945 Q96P63 SERPINB12 Serpin B12 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.384 82.445 3 0.030293 95257 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 33.204 25.838 86529000 0 0 0 7053400 1745700 9511100 2346100 13157000 4891700 5641800 3774200 6802900 8984100 7505600 15115000 32744 3945 29910 274971;274972;274973;274974;274975;274976;274977;274978;274979;274980;274981;274982 217977 217977 1 LSMFYETLK Unmodified 1130.5682 0.56818271 3466 Q8NI35 INADL InaD-like protein yes yes 0 0 0 By MS/MS 2 0 1 1 83.321 75.191 2 0.023396 98282 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.23 55.664 15677000 15677000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32745 3466 29911 274983 217978 217978 1 LSMINTMSK Unmodified 1023.5093 0.50928762 4075 Q99962 SH3GL2 Endophilin-A1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 56.984 48.803 2 0.00042128 66795 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 149.65 18.591 70933000 70933000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32746 4075 29912 274984;274985 217979;217980 217980 2 LSMINTMSK Oxidation (M) 1039.5042 0.50420224 4075 Q99962 SH3GL2 Endophilin-A1 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 40.325 35.467 2 0.041192 46274 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.11 35.445 44166000 0 44166000 0 0 0 0 0 0 0 0 0 0 0 0 0 32747 4075 29912 274986;274987 217981 217981 0 LSMLCKEEQQLK Unmodified 1505.7582 0.7581851 5347 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 2 1 63.518 63.61 3 0.022349 71986 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 25.701 4.4712 + 94388000 0 0 0 8101700 3916300 5746300 3907200 23515000 0 0 5851700 16986000 7196600 11827000 7340100 32748 5347 29913 274988;274989;274990;274991;274992;274993;274994;274995;274996;274997;274998 217982 217982 1 LSMPTQQASGQTPPR Unmodified 1597.7882 0.78823967 2567 Q15723 ELF2 ETS-related transcription factor Elf-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 44.615 45.082 2 0.00079778 50730 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 77.593 60.157 25669000 0 0 0 0 0 5297900 0 0 0 0 4414000 6022100 3530700 0 6404200 32749 2567 29914 274999;275000;275001;275002;275003;275004;275005;275006;275007 217983;217984;217985;217986;217987;217988;217989;217990;217991 217983 9 LSMPTQQASGQTPPR Oxidation (M) 1613.7832 0.78315429 2567 Q15723 ELF2 ETS-related transcription factor Elf-2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 26.869 27.158 2 0.00089153 27981 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 53.569 38.303 35389000 0 0 0 0 3122500 0 3156900 0 0 4753300 6334100 6612400 5612400 3031100 2766400 32750 2567 29914 275008;275009;275010;275011;275012;275013;275014;275015 217992;217993;217994;217995;217996;217997 217995 4219 6 LSMQELR Unmodified 875.45349 0.4534873 214 O14777 NDC80 Kinetochore protein NDC80 homolog yes yes 0 0 0 By MS/MS 10 0 1 1 45.13 45.182 2 0.039143 50892 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 69.176 8.3769 4066600 0 0 0 0 0 4066600 0 0 0 0 0 0 0 0 0 32751 214 29915 275016 217998 217998 1 LSMSQLNEK Unmodified 1048.5223 0.52229515 2152 Q08211 DHX9 ATP-dependent RNA helicase A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.456 41.634 2 1.9244E-20 46204 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 175.91 124.12 274640000 0 0 0 17278000 18664000 25586000 20606000 13076000 15282000 29670000 19354000 24484000 29394000 24596000 36653000 32752 2152 29916 275017;275018;275019;275020;275021;275022;275023;275024;275025;275026;275027;275028 217999;218000;218001;218002;218003;218004;218005;218006;218007;218008;218009;218010;218011 218000 13 LSMSQLNEK Oxidation (M) 1064.5172 0.51720977 2152 Q08211 DHX9 ATP-dependent RNA helicase A yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 19.608 19.524 2 0.0065771 20259 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 65.156 37.631 15799000 0 0 0 8049600 0 0 7749400 0 0 0 0 0 0 0 0 32753 2152 29916 275029;275030 218012;218013 218012 3460 1 LSMTCRSHLDEEEEQQK Unmodified 2118.931 0.9310171 2277 Q13371 PDCL Phosducin-like protein yes yes 0 0 1 By MS/MS 2 0 1 1 37.628 31.131 3 0.00021774 43502 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.82 57.148 6177800 6177800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32754 2277 29917 275031 218014;218015 218015 2 LSMVADLEDK Oxidation (M) 1135.5431 0.54309017 5366 yes yes 0 1 0 By MS/MS 10 0 1 1 7.8612 8.0329 2 0.011948 5991 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 48.561 20.387 + 5132800 0 0 0 0 0 0 0 0 5132800 0 0 0 0 0 0 32755 5366 29918 275032 218016 218016 6748 1 LSMWDRPDDLIGR Oxidation (M) 1588.7668 0.76677595 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 67.617 67.848 3 0.0011812 76902 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.754 51.513 154690000 0 0 0 0 0 23070000 0 0 14667000 18539000 16306000 33448000 21228000 0 27434000 32756 213 29919 275033;275034;275035;275036;275037;275038;275039 218017;218018;218019;218020;218021;218022;218023 218019 288 6 LSNGLLVHGPQCHSENEAK Unmodified 2089.0011 0.0010859926 3295 Q8IZH2 XRN1 5'-3' exoribonuclease 1 yes yes 0 0 0 By MS/MS 2 0 1 1 49.754 41.909 3 0.0064349 57952 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 34.586 25.422 7825100 7825100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32757 3295 29920 275040 218024 218024 1 LSNGSFSAPSLTNSR Unmodified 1536.7532 0.75323437 587 O94806 PRKD3 Serine/threonine-protein kinase D3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 58.621 58.778 2 0.044574 66830 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 28.903 15.895 14510000 0 0 0 0 1725000 0 0 2475200 0 2570600 2928300 3044100 1767000 0 0 32758 587 29921 275041;275042;275043;275044;275045;275046 218025 218025 1 LSNIFVIGK Unmodified 989.59097 0.59096706 1905 P62701 RPS4X 40S ribosomal protein S4, X isoform yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 2 2 2 1 76.659 76.709 1;2 0.0028051 88308 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 136.8 108.69 3661700000 0 0 0 162640000 199750000 244760000 258530000 258920000 221450000 338940000 346200000 486490000 319240000 332500000 492240000 32759 1905 29922 275047;275048;275049;275050;275051;275052;275053;275054;275055;275056;275057;275058;275059;275060;275061;275062;275063;275064;275065;275066;275067;275068;275069 218026;218027;218028;218029;218030;218031;218032;218033;218034;218035;218036;218037;218038;218039;218040 218038 12 LSNIVLK Unmodified 785.50109 0.50108942 1463 P42695 NCAPD3 Condensin-2 complex subunit D3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 44.708 44.828 2 0.023425 50221 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 85.813 0 147430000 0 0 0 11714000 13748000 13395000 12288000 9809800 9227400 16200000 17113000 0 13862000 12903000 17167000 32760 1463 29923 275070;275071;275072;275073;275074;275075;275076;275077;275078;275079;275080 218041;218042;218043;218044;218045;218046;218047;218048;218049;218050 218042 10 LSNLALVKPEK Unmodified 1210.7285 0.72852317 207 O14737 PDCD5 Programmed cell death protein 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 1 1 1 1 1 1 2 1 2 2 47.661 47.905 2;3 0.015903 52555 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.317 26.517 338430000 0 0 0 5520400 5386200 4062300 14090000 7267700 4842600 10651000 60012000 70586000 12130000 43008000 100870000 32761 207 29924 275081;275082;275083;275084;275085;275086;275087;275088;275089;275090;275091;275092;275093;275094;275095 218051;218052;218053;218054;218055;218056;218057;218058 218051 6 LSNLVETPK Unmodified 999.56006 0.56006086 5053 Q9UPP1 PHF8 Histone lysine demethylase PHF8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 41.057 41.309 2 0.0032866 45450 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 93.267 45.152 57376000 0 0 0 0 5109100 0 8711000 5627700 0 7446800 0 6862700 5772100 6048600 11798000 32762 5053 29925 275096;275097;275098;275099;275100;275101;275102;275103;275104;275105 218059;218060;218061;218062;218063;218064;218065;218066;218067;218068;218069 218067 11 LSNNMEQRPSR Oxidation (M) 1346.6361 0.63609612 5000 Q9ULM3 YEATS2 YEATS domain-containing protein 2 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 6.7034 6.8102 3 0.0027388 4634 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 52.693 26.992 53322000 0 0 0 4852000 0 6718500 3942100 2805000 3265200 11167000 0 11926000 4358000 4288700 0 32763 5000 29926 275106;275107;275108;275109;275110;275111;275112;275113;275114 218070;218071 218070 6343 2 LSNNMEQRPSR Unmodified 1330.6412 0.6411815 5000 Q9ULM3 YEATS2 YEATS domain-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 13.941 14.052 3 0.0047508 13224 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 44.543 33.33 81573000 0 0 0 6689500 14143000 11109000 6023700 5898500 3085700 0 17737000 16886000 0 0 0 32764 5000 29926 275115;275116;275117;275118;275119;275120;275121;275122 218072 218072 1 LSNPGISYDSR Unmodified 1207.5833 0.5833155 5316 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 2 1 1 1 1 1 1 1 1 26.366 26.552 2 0.020698 27165 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 42.599 22.078 + 140780000 0 0 0 8459600 9647800 10277000 6758500 0 8069100 16785000 23926000 30416000 9630200 11071000 5743600 32765 5316 29927 275123;275124;275125;275126;275127;275128;275129;275130;275131;275132;275133;275134 218073;218074;218075;218076 218074 3 LSNRPAFMPSEGK Unmodified 1432.7133 0.71328381 356 O43707 ACTN4 Alpha-actinin-4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 1 1 1 1 1 1 2 2 1 2 2 43.27 43.538 2;3 0.00123 49306 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 47.506 0 830020000 0 0 0 24996000 14121000 59125000 27191000 33373000 18268000 34926000 118320000 112120000 27003000 67428000 293160000 32766 356 29928 275135;275136;275137;275138;275139;275140;275141;275142;275143;275144;275145;275146;275147;275148;275149;275150 218077;218078;218079;218080;218081;218082;218083;218084;218085;218086;218087;218088 218087 5 LSNRPAFMPSEGR Unmodified 1460.7194 0.71943182 971 P12814 ACTN1 Alpha-actinin-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 45.154 45.326 3 0.0016213 49574 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.024 38.968 230150000 0 0 0 7222500 4871000 16660000 19072000 7136800 0 11319000 21120000 18667000 9076100 17222000 97784000 32767 971 29929 275151;275152;275153;275154;275155;275156;275157;275158;275159;275160;275161 218089;218090;218091;218092;218093;218094;218095;218096;218097;218098;218099;218100 218092 11 LSNRPAFMPSEGR Oxidation (M) 1476.7143 0.71434645 971 P12814 ACTN1 Alpha-actinin-1 yes yes 0 1 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 32.079 32.299 3 0.010236 34291 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.14 27.759 38990000 0 0 0 0 2134900 4700200 0 3985800 0 5786300 0 9722700 0 0 12660000 32768 971 29929 275162;275163;275164;275165;275166;275167 218101 218101 1284 0 LSNSDSQDIQGR Unmodified 1318.6113 0.61132116 186 O14545 TRAFD1 TRAF-type zinc finger domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.597 16.776 2 9.1139E-20 16252 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 159.4 144.73 159250000 0 0 0 8747400 6540200 7205100 10483000 8612600 6540600 11788000 16331000 19722000 16097000 18305000 28875000 32769 186 29930 275168;275169;275170;275171;275172;275173;275174;275175;275176;275177;275178;275179 218102;218103;218104;218105;218106;218107;218108;218109;218110;218111;218112;218113 218111 12 LSNSSSSVSPLILSSNLPVNNK Unmodified 2256.1961 0.19614021 4185 Q9BVC5 C2orf49 Ashwin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.08 1 1 22 2 2 2 2 2 2 2 2 1 1 2 2 2 83.463 83.178 2;3 4.3829E-13 96266 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 98.439 95.946 289600000 0 14263000 0 11243000 15692000 18660000 17542000 18388000 15947000 27402000 28289000 31250000 17917000 27135000 45869000 32770 4185 29931 275180;275181;275182;275183;275184;275185;275186;275187;275188;275189;275190;275191;275192;275193;275194;275195;275196;275197;275198;275199;275200;275201;275202;275203 218114;218115;218116;218117;218118;218119;218120 218119 7 LSNTVLPSESMK Unmodified 1304.6646 0.66460229 1607 P49848 TAF6 Transcription initiation factor TFIID subunit 6 yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 52.183 52.384 2 0.0053487 58759 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 54.584 36.719 38229000 0 0 0 0 6499300 7768700 2633200 0 3258300 0 0 5609200 5492100 0 6968500 32771 1607 29932 275204;275205;275206;275207;275208;275209;275210;275211 218121;218122;218123;218124 218124 4 LSPAALHNGLLAR Unmodified 1331.7674 0.76736829 4518 Q9HCM7 FBRSL1 Fibrosin-1-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 62.059 62.356 3 0.019486 70555 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 29.809 20.702 63990000 0 0 0 0 0 0 0 0 5336500 7959200 9340900 11205000 10733000 7688700 11728000 32772 4518 29933 275212;275213;275214;275215;275216;275217;275218 218125 218125 1 LSPAHAHNHLR Unmodified 1251.6585 0.65848655 34 A7E2V4 ZSWIM8 Zinc finger SWIM domain-containing protein 8 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 9.1977 9.5058 3 0.0077051 7327 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.802 31.897 6162000 0 0 0 0 0 0 0 0 0 0 0 3583300 0 0 2578700 32773 34 29934 275219;275220 218126 218126 1 LSPANQR Unmodified 784.41915 0.4191507 2262 Q13263 TRIM28 Transcription intermediary factor 1-beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 6.9387 7.0575 2 0.02139 4991 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 106.76 76.092 164200000 0 0 0 9382400 9254500 21676000 17831000 17044000 15983000 0 20561000 12204000 12196000 10364000 17708000 32774 2262 29935 275221;275222;275223;275224;275225;275226;275227;275228;275229;275230;275231 218127;218128;218129;218130;218131;218132;218133;218134;218135;218136 218128 10 LSPATPTSEGPK Unmodified 1183.6085 0.60846762 3312 Q8N1G0 ZNF687 Zinc finger protein 687 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 28.067 27.885 2 1.2589E-05 34290 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.53 91.278 130160000 0 21173000 0 6783700 8168400 8943400 8177600 0 7814200 11716000 12407000 10443000 11494000 10914000 12124000 32775 3312 29936 275232;275233;275234;275235;275236;275237;275238;275239;275240;275241;275242;275243 218137;218138;218139;218140;218141 218140 4 LSPDAIPGK Unmodified 896.49673 0.49673232 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.79 1 4 1 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 42.164 41.182 1;2 0.018576 41150 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 54.712 35.076 8088800000 360030000 5960200000 88772000 74906000 72141000 208130000 89049000 77407000 56083000 171020000 159120000 193830000 123680000 162160000 292280000 32776 1565 29937 275244;275245;275246;275247;275248;275249;275250;275251;275252;275253;275254;275255;275256;275257;275258;275259;275260;275261 218142;218143;218144;218145;218146;218147;218148;218149;218150;218151;218152;218153;218154 218152 7 LSPDGHFGSK Unmodified 1043.5036 0.50360861 3476 Q8TAT6 NPLOC4 Nuclear protein localization protein 4 homolog yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 22.658 22.737 2 0.016645 23875 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 49.418 28.118 24678000 0 0 0 0 1591600 4640700 3140600 0 2022100 4996800 8286400 0 0 0 0 32777 3476 29938 275262;275263;275264;275265;275266;275267 218155;218156 218155 2 LSPEASDLIIK Unmodified 1184.6653 0.66525421 700 O95835 LATS1 Serine/threonine-protein kinase LATS1 yes yes 0 0 0 By MS/MS 2 0 1 1 75.375 70.435 2 0.005176 88185 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.409 34.291 69675000 0 69675000 0 0 0 0 0 0 0 0 0 0 0 0 0 32778 700 29939 275268 218157 218157 1 LSPEDYTLK Unmodified 1064.539 0.53899107 839 P07339 CTSD Cathepsin D;Cathepsin D light chain;Cathepsin D heavy chain yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 2 1 1 1 1 1 1 1 1 1 53.196 53.211 2 0.0035031 61541 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 103.56 71.629 1048300000 0 0 0 467020000 86088000 0 63059000 98491000 58367000 0 75897000 70778000 79664000 48963000 0 32779 839 29940 275269;275270;275271;275272;275273;275274;275275;275276;275277;275278;275279 218158;218159;218160;218161;218162;218163;218164 218162 7 LSPEELAELK Unmodified 1127.6074 0.60740498 3291 Q8IZ69 TRMT2A tRNA (uracil-5-)-methyltransferase homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 6.25 3.77 1 1 2 1 1 1 1 74.803 72.835 2 0.011537 83373 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.066 28.929 27027000 0 6428700 4653900 0 0 0 0 0 0 0 0 0 0 0 15944000 32780 3291 29941 275280;275281;275282;275283 218165;218166;218167;218168 218165 4 LSPEELLLR Unmodified 1068.6179 0.61791009 986;2421;985 P13797;Q14651;P13796 PLS3;PLS1;LCP1 Plastin-3;Plastin-1;Plastin-2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.455 82.517 2 0.0033037 95424 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 93.374 58.079 782870000 0 0 0 20218000 21702000 66333000 37454000 39991000 23672000 66934000 77772000 71268000 48182000 78088000 231260000 32781 986;2421;985 29942 275284;275285;275286;275287;275288;275289;275290;275291;275292;275293;275294;275295 218169;218170;218171;218172;218173;218174;218175;218176;218177;218178;218179;218180 218174 7 LSPELLNTGRFETK Unmodified 1603.857 0.85697116 1702 P52789 HK2 Hexokinase-2 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69.362 68.349 3 2.1031E-19 90365 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 102.52 91.261 304870000 122130000 27538000 4676800 6212300 5656900 14328000 6901400 14247000 5899500 15571000 12667000 17778000 12894000 13089000 25281000 32782 1702 29943 275296;275297;275298;275299;275300;275301;275302;275303;275304;275305;275306;275307;275308;275309;275310 218181;218182;218183;218184;218185;218186;218187;218188;218189;218190;218191;218192;218193;218194 218186 14 LSPENEPDLK Unmodified 1140.5663 0.56626845 2525 Q15386 UBE3C Ubiquitin-protein ligase E3C yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 39.8 34.961 2 0.034131 45218 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.535 50.165 37177000 0 37177000 0 0 0 0 0 0 0 0 0 0 0 0 0 32783 2525 29944 275311;275312 218195;218196 218195 2 LSPENNQVLTK Unmodified 1241.6616 0.66156582 2605 Q16514 TAF12 Transcription initiation factor TFIID subunit 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 35.257 35.487 2 0.00028854 37885 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 103.7 73.013 89992000 0 0 0 0 5962200 5356100 7613300 7822700 7625400 10744000 9418100 11767000 0 8521600 15162000 32784 2605 29945 275313;275314;275315;275316;275317;275318;275319;275320;275321;275322 218197;218198;218199;218200;218201;218202;218203;218204;218205;218206 218200 10 LSPEPLK Unmodified 782.4538 0.45380487 2833 Q5VZK9 LRRC16A Leucine-rich repeat-containing protein 16A yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 33.965 29.934 2 0.031783 39031 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.029 34.319 363860000 0 357840000 6015700 0 0 0 0 0 0 0 0 0 0 0 0 32785 2833 29946 275323;275324 218207 218207 1 LSPEPWTPETGLVTDAFK Unmodified 1986.9939 0.99385857 403;670 O95573;O60488 ACSL3;ACSL4 Long-chain-fatty-acid--CoA ligase 3;Long-chain-fatty-acid--CoA ligase 4 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 89.912 90.02 2 0.00094612 104659 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 38.366 24.46 58807000 0 0 0 0 2514500 2512300 1563300 3955800 2534600 11399000 8656000 6788800 1578000 3588300 13716000 32786 670;403 29947 275325;275326;275327;275328;275329;275330;275331;275332;275333;275334;275335 218208;218209;218210;218211;218212;218213 218213 6 LSPESAEEYIEYLK Unmodified 1669.8087 0.80868357 4521 Q9HCS7 XAB2 Pre-mRNA-splicing factor SYF1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6 4 3 3 1 1 1 1 1 1 89.032 86.527 2 4.9507E-32 107902 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 153.11 142.73 121150000 20297000 89929000 2310300 0 0 0 0 0 0 2552500 2370300 0 0 0 3695300 32787 4521 29948 275336;275337;275338;275339;275340;275341 218214;218215;218216;218217 218215 4 LSPEWGAAEAPEFPGEAVSEDEYK Unmodified 2607.1653 0.16529359 2807 Q5VST9 OBSCN Obscurin yes yes 0 0 0 By MS/MS 3 0 1 1 86.182 82.959 3 0.010502 99350 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 25.52 21.857 4050900 0 4050900 0 0 0 0 0 0 0 0 0 0 0 0 0 32788 2807 29949 275342 218218 218218 1 LSPFHGSSPPQSTPLSPPPLTPK Unmodified 2368.2427 0.24269647 4433 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 76.42 76.445 3 1.4241E-13 88109 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 72.771 64.779 78749000 0 0 0 5487800 6281900 7996300 10063000 10918000 7204400 0 9164000 13162000 0 8470900 0 32789 4433 29950 275343;275344;275345;275346;275347;275348;275349;275350;275351 218219;218220;218221;218222;218223;218224;218225;218226;218227;218228 218221 9 LSPFIENVDK Unmodified 1160.6077 0.60773933 2859 Q68DQ2 CRYBG3 Very large A-kinase anchor protein yes yes 0 0 0 By MS/MS 10 0 1 1 65.3 65.437 2 0.044161 74873 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 38.754 14.985 2486500 0 0 0 0 0 0 2486500 0 0 0 0 0 0 0 0 32790 2859 29951 275352 218229 218229 1 LSPFMADIR Unmodified 1048.5376 0.53755128 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 74.724 74.743 2 0.02892 86141 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 48.794 28.512 99346000 0 0 0 7347300 5532100 12512000 6389000 9140500 6535900 13484000 16890000 0 8978900 12536000 0 32791 1124 29952 275353;275354;275355;275356;275357;275358;275359;275360;275361;275362;275363 218230;218231;218232;218233;218234;218235;218236 218230 7 LSPFMADIR Oxidation (M) 1064.5325 0.5324659 1124 P21333 FLNA Filamin-A yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 63.003 63.357 2 0.032768 71586 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.19 20.663 49562000 0 0 0 0 0 0 0 0 0 20263000 0 0 0 0 29299000 32792 1124 29952 275364;275365 218237 218237 1 LSPGGYFIGTTPNSFELIR Unmodified 2068.0629 0.062941193 296 O43148 RNMT mRNA cap guanine-N7 methyltransferase yes yes 0 0 0 By MS/MS 10 0 1 1 91.955 92.093 2 0.012957 106712 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.219 31.115 1245800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1245800 32793 296 29953 275366 218238 218238 1 LSPGIPLK Unmodified 823.51674 0.51673948 1081 P18858 LIG1 DNA ligase 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 55.222 55.532 2 0.01982 63119 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 63.306 32.862 65698000 0 0 0 0 0 12396000 0 0 6570600 7850000 8151300 7167700 6476500 6013700 11072000 32794 1081 29954 275367;275368;275369;275370;275371;275372;275373;275374 218239 218239 1 LSPGTDSSSNLGGVK Unmodified 1417.7049 0.7048872 3080 Q7Z3B3 KANSL1 KAT8 regulatory NSL complex subunit 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 37.114 36.515 2 0.00011959 39586 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.477 67.079 65604000 0 7262500 4325300 3297100 4226200 0 0 5384500 3823700 0 6323300 8673200 5878100 7073400 9336600 32795 3080 29955 275375;275376;275377;275378;275379;275380;275381;275382;275383;275384;275385 218240;218241;218242;218243;218244;218245;218246;218247;218248;218249 218241 10 LSPIIEDSREATHSSGFSGSSASVASTSSIK Unmodified 3094.5055 0.50546569 413 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 72.85 66.997 4 2.0506E-12 88065 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.504 48.058 117400000 115150000 0 2250200 0 0 0 0 0 0 0 0 0 0 0 0 32796 413 29956 275386;275387 218250 218250 1 LSPIMLGK Oxidation (M) 873.49937 0.49937486 2886 Q6ICB0 DESI1 Desumoylating isopeptidase 1 yes yes 0 1 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 53.849 53.51 2 0.033858 60474 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 46.426 24.295 31187000 0 0 0 7075300 15027000 0 0 9084200 0 0 0 0 0 0 0 32797 2886 29957 275388;275389;275390 218251;218252 218251 2 LSPIPAVPASVPLQAWHPAK Unmodified 2078.1677 0.16768104 2137 Q07617 SPAG1 Sperm-associated antigen 1 yes yes 0 0 0 By MS/MS 10 0 1 1 86.902 87.06 3 0.01385 100661 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 26.593 23.306 3256000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3256000 32798 2137 29958 275391 218253 218253 1 LSPLPGGPGAGDPR Unmodified 1289.6728 0.67279921 2570 Q15742 NAB2 NGFI-A-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 50.958 51.061 2 0.0044327 57739 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 45.653 26.338 206130000 0 0 0 16070000 13522000 0 21479000 20064000 15653000 22899000 28552000 0 29185000 15582000 23123000 32799 2570 29959 275392;275393;275394;275395;275396;275397;275398;275399;275400;275401 218254;218255;218256;218257;218258;218259;218260;218261 218255 7 LSPPQYSHQVQVK Unmodified 1509.794 0.79397698 3227 Q8IVH2 FOXP4 Forkhead box protein P4 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 42.061 42.314 3 0.02277 47291 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 26.124 13.357 36492000 0 0 0 0 0 4127200 4047300 3803200 3157500 6534100 5184300 0 0 0 9638400 32800 3227 29960 275402;275403;275404;275405;275406;275407;275408 218262 218262 1 LSPPYSSPQEFAQDVGR Unmodified 1876.8955 0.89554151 2262 Q13263 TRIM28 Transcription intermediary factor 1-beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.42 2 1 1 24 2 2 2 2 2 2 2 2 2 2 2 2 2 77.156 76.9 2;3 5.1091E-29 89029 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 131.53 122.8 2023700000 0 95328000 0 52208000 97831000 139930000 138800000 113370000 110310000 195540000 202980000 249600000 139240000 158670000 329910000 32801 2262 29961 275409;275410;275411;275412;275413;275414;275415;275416;275417;275418;275419;275420;275421;275422;275423;275424;275425;275426;275427;275428;275429;275430;275431;275432;275433;275434 218263;218264;218265;218266;218267;218268;218269;218270;218271;218272;218273;218274;218275 218275 12 LSPQAVNSIAK Unmodified 1126.6346 0.63462279 1287 P30626 SRI Sorcin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.551 45.72 2 1.5838E-05 51220 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 134.68 72.677 734840000 0 0 0 35213000 26276000 38121000 46805000 44609000 29320000 68142000 91275000 89361000 51485000 60267000 153970000 32802 1287 29962 275435;275436;275437;275438;275439;275440;275441;275442;275443;275444;275445;275446 218276;218277;218278;218279;218280;218281;218282;218283;218284;218285;218286;218287 218280 11 LSPQFPNEEDSFHK Unmodified 1673.7686 0.76855009 1598 P49770 EIF2B2 Translation initiation factor eIF-2B subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58.458 57.356 3 0.00031635 64457 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 64.798 59.912 448840000 14887000 190240000 22623000 16283000 10725000 18892000 10018000 9774500 12920000 17525000 19762000 24134000 27228000 15383000 38447000 32803 1598 29963 275447;275448;275449;275450;275451;275452;275453;275454;275455;275456;275457;275458;275459;275460;275461 218288;218289;218290;218291;218292;218293;218294;218295;218296;218297;218298;218299 218296 11 LSPQMQVHQDK Unmodified 1309.6449 0.6448699 2195 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 28.432 24.093 2;3 0.0010387 31622 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.488 60.367 49542000 20894000 22912000 5735200 0 0 0 0 0 0 0 0 0 0 0 0 32804 2195 29964 275462;275463;275464;275465 218300;218301;218302;218303 218300 4 LSPQQESSASSK Unmodified 1247.5994 0.59935949 1026 P15822 HIVEP1 Zinc finger protein 40 yes yes 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 10.875 10.986 2 0.0073779 8752 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 52.49 31.042 20663000 0 0 0 1668000 475220 1234700 1776000 643440 1467200 0 0 3244600 2965500 3409400 3779000 32805 1026 29965 275466;275467;275468;275469;275470;275471;275472;275473;275474;275475 218304;218305 218304 2 LSPSPTSQR Unmodified 971.50361 0.50360861 757 P02545 LMNA Prelamin-A/C;Lamin-A/C yes yes 0 0 0 By MS/MS 10 0 1 1 14.75 14.614 2 0.036888 14110 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 78.192 25.029 61116000 0 0 0 61116000 0 0 0 0 0 0 0 0 0 0 0 32806 757 29966 275476 218306 218306 0 LSPSPTTEDPR Unmodified 1198.583 0.58298115 4140 Q9BTC8 MTA3 Metastasis-associated protein MTA3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.932 27.129 2 0.021002 28960 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 54.539 41.503 84329000 0 0 0 7510200 6826000 8332800 6997800 4666000 5172300 6526600 4891300 9435200 7419900 7802500 8748200 32807 4140 29967 275477;275478;275479;275480;275481;275482;275483;275484;275485;275486;275487;275488 218307;218308;218309;218310;218311 218308 5 LSPTDNLPR Unmodified 1011.5349 0.53490874 888 P09543 CNP 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.069 43.244 2 0.0033037 48581 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 93.374 36.093 548480000 0 0 0 38730000 30119000 36149000 45248000 43620000 26823000 50396000 64874000 72511000 51613000 35941000 52455000 32808 888 29968 275489;275490;275491;275492;275493;275494;275495;275496;275497;275498;275499;275500 218312;218313;218314;218315;218316;218317;218318;218319;218320;218321;218322;218323;218324 218312 13 LSPVAVQNYAYLK Unmodified 1464.7977 0.79766537 4645 Q9NUJ3 TCP11L1 T-complex protein 11-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 75.984 76.164 2 0.00024615 87954 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 82.749 69.575 43897000 0 0 0 0 0 0 5079400 4121800 0 6732400 0 9593700 0 6384200 11985000 32809 4645 29969 275501;275502;275503;275504;275505;275506;275507 218325;218326;218327;218328;218329;218330;218331 218331 7 LSPVGWVSSSQGK Unmodified 1330.6881 0.68811492 2039 Q00587 CDC42EP1 Cdc42 effector protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.283 64.374 2 0.00041176 73552 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 96.626 87.933 341030000 0 0 0 16837000 20775000 24142000 29519000 23832000 28703000 33230000 31977000 37806000 21799000 27351000 45062000 32810 2039 29970 275508;275509;275510;275511;275512;275513;275514;275515;275516;275517;275518;275519 218332;218333;218334;218335;218336;218337;218338;218339;218340;218341;218342 218335 10 LSPWIRPDSK Unmodified 1197.6506 0.6506072 208 O14744 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 49.445 49.623 3 0.0039975 54658 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.92 48.585 174880000 0 0 0 0 13085000 21766000 10979000 0 12909000 20073000 22699000 0 16924000 16975000 39470000 32811 208 29971 275520;275521;275522;275523;275524;275525;275526;275527;275528;275529 218343;218344;218345;218346;218347;218348;218349;218350;218351 218345 9 LSQALQVR Unmodified 913.53451 0.53451481 4408 Q9H5N1 RABEP2 Rab GTPase-binding effector protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 33.631 33.791 2 0.018051 35908 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.757 18.875 14281000 0 0 0 0 1004900 2030400 1605500 0 0 2873500 2978600 0 0 0 3788000 32812 4408 29972 275530;275531;275532;275533;275534;275535 218352;218353 218352 2 LSQAPLLPSLLK Unmodified 1278.7911 0.79112343 3629 Q92574 TSC1 Hamartin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 86.981 87.104 2 0.0086611 100746 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.108 42.914 4101300 0 0 0 0 0 0 0 0 0 1567500 0 0 0 763760 1770100 32813 3629 29973 275536;275537;275538 218354;218355 218355 2 LSQDEIVLGTK Unmodified 1201.6554 0.65541781 4321 Q9H0B6 KLC2 Kinesin light chain 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 56.26 55.104 2 0.00015988 61843 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 108.7 52.495 367230000 6154900 89126000 0 18454000 19755000 20272000 18186000 20351000 18035000 23201000 31808000 32838000 23605000 17610000 27833000 32814 4321 29974 275539;275540;275541;275542;275543;275544;275545;275546;275547;275548;275549;275550;275551;275552;275553 218356;218357;218358;218359;218360;218361;218362;218363;218364;218365;218366;218367;218368;218369 218365 14 LSQECPIK Unmodified 973.49027 0.49026674 5280 Q9Y6E2 BZW2 Basic leucine zipper and W2 domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.122 23.327 2 0.0053152 24343 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 107.32 6.0332 396310000 0 0 0 18586000 17762000 20068000 11702000 10984000 20321000 27963000 43395000 79190000 63368000 37069000 45902000 32815 5280 29975 275554;275555;275556;275557;275558;275559;275560;275561;275562;275563;275564;275565 218370;218371;218372;218373;218374;218375;218376;218377;218378;218379;218380;218381;218382 218371 11 LSQEDPDYGIR Unmodified 1291.6044 0.60444487 768 P04040 CAT Catalase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 41.296 41.246 2 0.0055261 46585 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 67.414 46.714 66938000 0 0 0 14378000 4548800 10940000 0 18544000 0 7795800 0 0 10731000 0 0 32816 768 29976 275566;275567;275568;275569;275570;275571 218383;218384;218385;218386 218386 4 LSQEEILGSTR Unmodified 1231.6408 0.64083038 4629 Q9NSK0 KLC4 Kinesin light chain 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 50.294 51.017 2 0.0019227 57158 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 82.417 31.071 15982000 0 0 0 0 0 0 0 0 0 0 0 15982000 0 0 0 32817 4629 29977 275572;275573;275574;275575 218387;218388;218389;218390 218390 4 LSQELEYLTEDVK Unmodified 1565.7825 0.78246882 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 1 2 1 1 2 2 1 1 1 2 2 79.328 79.44 2;3 1.1726E-20 91691 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 157.68 136.9 408070000 0 0 0 0 13273000 28213000 13525000 24009000 30815000 63558000 47345000 39741000 25463000 38918000 83208000 32818 965 29978 275576;275577;275578;275579;275580;275581;275582;275583;275584;275585;275586;275587;275588;275589;275590;275591;275592 218391;218392;218393;218394;218395;218396;218397;218398;218399;218400;218401;218402;218403;218404;218405 218400 15 LSQETEALGR Unmodified 1102.5619 0.56185177 2082 Q02818 NUCB1 Nucleobindin-1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.472 28.667 2 0.0014144 30816 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 106.68 44.576 153460000 0 0 0 8002400 1311900 6932500 10135000 11452000 8282200 10588000 23905000 25211000 8220200 14458000 24967000 32819 2082 29979 275593;275594;275595;275596;275597;275598;275599;275600;275601;275602;275603;275604 218406;218407;218408;218409;218410;218411;218412;218413;218414 218410 9 LSQILTDFPK Unmodified 1160.6441 0.64412484 4263 Q9BZE4 GTPBP4 Nucleolar GTP-binding protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 76.886 76.881 2 0.021425 88802 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 61.56 22.597 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32820 4263 29980 275605 218415 218415 1 LSQLEEHLSQLQDNPPQEK Unmodified 2232.1022 0.10223983 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.42 1.93 1 11 1 1 1 1 1 1 1 1 1 1 1 1 66.499 66.244 3 2.348E-08 75909 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 80.975 72.585 120980000 0 5650600 0 4297300 0 10539000 5699900 9059600 7900900 11969000 13700000 13873000 9755000 9116100 19421000 32821 2459 29981 275606;275607;275608;275609;275610;275611;275612;275613;275614;275615;275616;275617 218416;218417;218418;218419;218420;218421;218422;218423;218424;218425;218426;218427;218428;218429;218430;218431 218417 16 LSQLEGVNVER Unmodified 1242.6568 0.65681479 3961 Q96QK1 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 50.061 50.161 2 4.7941E-21 55576 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 169.37 86.109 241280000 0 0 0 16314000 11010000 0 14991000 16427000 0 17729000 35805000 0 21255000 27868000 79879000 32822 3961 29982 275618;275619;275620;275621;275622;275623;275624;275625;275626 218432;218433;218434;218435;218436;218437;218438;218439;218440;218441 218434 6 LSQLGLDAGK Unmodified 1000.5553 0.55530983 2572 Q15750 TAB1 TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 43.357 43.754 2 0.00089677 48385 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 116.73 42.755 93527000 0 0 0 0 0 0 9506900 0 0 12505000 13105000 14284000 11072000 9525900 23528000 32823 2572 29983 275627;275628;275629;275630;275631;275632;275633;275634;275635;275636;275637 218442;218443;218444;218445;218446;218447;218448;218449;218450;218451;218452 218451 11 LSQLQVEAAR Unmodified 1113.6142 0.6142217 4822 Q9P2N5 RBM27 RNA-binding protein 27 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.456 41.634 2 0.0014446 46141 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 92.051 39.265 104530000 0 0 0 4688500 5218700 7677300 8115200 8705300 7799000 10955000 10830000 12195000 8795000 7268600 12282000 32824 4822 29984 275638;275639;275640;275641;275642;275643;275644;275645;275646;275647;275648;275649 218453;218454;218455;218456;218457;218458;218459;218460;218461;218462;218463;218464 218458 11 LSQLVNSNNLK Unmodified 1228.6776 0.67755023 4921 Q9UI42 CPA4 Carboxypeptidase A4 yes yes 0 0 0 By MS/MS 2 0 1 1 52.178 44.163 2 2.5856E-05 60795 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 137.95 79.993 22783000 22783000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32825 4921 29985 275650 218465 218465 1 LSQMILDK Oxidation (M) 962.51067 0.51066783 129 O00231 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36.827 35.952 2 0.00313 39370 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 109.48 49.12 1210900000 24252000 756900000 24948000 31686000 34833000 37349000 17043000 13649000 11758000 68078000 53628000 80983000 14770000 13774000 27267000 32826 129 29986 275651;275652;275653;275654;275655;275656;275657;275658;275659;275660;275661;275662;275663;275664;275665 218466;218467;218468;218469;218470;218471;218472;218473;218474;218475;218476;218477;218478;218479;218480;218481;218482;218483;218484;218485;218486 218478 172 20 LSQMILDK Unmodified 946.51575 0.5157532 129 O00231 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 7.56 3.62 4 1 11 1 3 1 1 1 1 1 1 1 1 1 1 1 1 49.791 48.083 1;2 0.0052642 62374 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 144.12 77.44 1289500000 22673000 827940000 12731000 24548000 32186000 43795000 16996000 14980000 10401000 66683000 87680000 86355000 21307000 21233000 0 32827 129 29986 275666;275667;275668;275669;275670;275671;275672;275673;275674;275675;275676;275677;275678;275679;275680;275681 218487;218488;218489;218490;218491;218492;218493;218494;218495;218496;218497 218490 9 LSQNIAVQTDFK Unmodified 1362.7143 0.71432967 3414 Q8ND24 RNF214 RING finger protein 214 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 60.133 59.805 2 8.1009E-09 68265 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 129.89 109.75 142430000 0 68594000 0 0 3709800 9067500 5537300 5819800 5905300 6228700 7602700 7072700 6787500 6180000 9926700 32828 3414 29987 275682;275683;275684;275685;275686;275687;275688;275689;275690;275691;275692;275693 218498;218499;218500;218501;218502;218503;218504;218505;218506;218507;218508;218509;218510;218511 218505 13 LSQNISELK Unmodified 1030.5659 0.56587452 413 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.5 3.55 1 1 4 2 1 1 1 1 38.96 37.35 2 0.0031641 44758 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 128.6 56.725 181550000 0 117300000 0 19313000 0 0 14934000 14107000 0 0 0 0 15899000 0 0 32829 413 29988 275694;275695;275696;275697;275698;275699 218512;218513;218514;218515;218516;218517 218515 6 LSQNSVNLSPSSHANNLSVVTYSK Unmodified 2545.2772 0.27724408 4417 Q9H6K1 C6orf106 Uncharacterized protein C6orf106 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 67.03 67.257 3 1.3387E-08 76486 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.72 44.287 18777000 0 0 0 0 0 3431800 0 0 0 4241100 3999500 0 0 0 7104700 32830 4417 29989 275700;275701;275702;275703 218518;218519;218520;218521 218520 4 LSQPESAEK Unmodified 987.48729 0.48728985 4976 Q9UKV3 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 28.1 28.291 2 0.043067 30406 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 43.769 6.6101 33971000 0 0 0 0 0 6583000 0 0 4331000 8540400 0 0 8518700 5997800 0 32831 4976 29990 275704;275705;275706;275707;275708 218522 218522 1 LSQPPLEQTQLQVK Unmodified 1607.8883 0.88827129 3105 Q7Z589 EMSY Protein EMSY yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 64.388 64.472 2 0.0016723 73094 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.225 43.269 46877000 0 0 0 2117900 3144200 3202200 4818200 2786100 0 4588000 3971300 6341400 4610700 5459000 5838200 32832 3105 29991 275709;275710;275711;275712;275713;275714;275715;275716;275717;275718;275719 218523;218524;218525;218526 218524 4 LSQQLDK Unmodified 830.44978 0.44978213 992 P13984 GTF2F2 General transcription factor IIF subunit 2 yes yes 0 0 0 By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 13.403 13.525 2 0.024296 13051 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 99.375 16.088 125250000 0 0 0 10125000 8667600 10434000 14842000 7241300 11665000 0 21787000 0 0 10618000 29874000 32833 992 29992 275720;275721;275722;275723;275724;275725;275726;275727;275728 218527;218528 218527 2 LSQQMVMVK 2 Oxidation (M) 1094.5464 0.54640141 1254 P29597 TYK2 Non-receptor tyrosine-protein kinase TYK2 yes yes 0 2 0 By MS/MS 10 0 1 1 64.345 64.507 2 0.016849 73555 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 41.652 10.966 4456100 0 0 0 0 0 0 0 0 4456100 0 0 0 0 0 0 32834 1254 29993 275729 218529 218529 1853;1854 1 LSQSFALPVTGGTVVTPK Unmodified 1800.9986 0.99855002 3771 Q96C34 RUNDC1 RUN domain-containing protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 82.328 82.46 2 0.0028788 95393 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 53.252 39.094 14304000 0 0 0 0 0 3803300 2581000 3763000 0 0 0 4156800 0 0 0 32835 3771 29994 275730;275731;275732;275733 218530;218531 218531 1 LSQSPDSNLCDK Unmodified 1362.6085 0.60854397 3220 Q8IUR7 ARMC8 Armadillo repeat-containing protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 25.761 26.264 2 0.033663 26866 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 33.866 29.254 15819000 0 0 0 0 0 0 0 0 0 0 2549900 4198400 3297900 1814200 3958900 32836 3220 29995 275734;275735;275736;275737;275738 218532 218532 1 LSQSSQDSSPVR Unmodified 1289.6212 0.62115757 635 O95251 KAT7 Histone acetyltransferase KAT7 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.327 16.506 2 0.0097862 14937 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 47.302 26.602 41211000 0 0 0 2179800 1696200 2339100 2140700 1744900 1828400 5102800 6749500 7226200 3683500 3031300 3488500 32837 635 29996 275739;275740;275741;275742;275743;275744;275745;275746;275747;275748;275749;275750 218533 218533 1 LSQTPHSQPPRPGTCK Unmodified 1789.8894 0.8893507 4872 Q9UER7 DAXX Death domain-associated protein 6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 1 1 1 1 1 2 1 2 2 2 1 15.983 16.181 3;4 0.0022254 14575 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 56.599 50.436 171130000 0 0 0 10010000 9094600 11327000 8644300 7238900 7862700 18424000 4660600 20085000 28360000 31849000 13570000 32838 4872 29997 275751;275752;275753;275754;275755;275756;275757;275758;275759;275760;275761;275762;275763;275764;275765;275766 218534;218535;218536;218537;218538;218539 218537 5 LSQTSNVDK Unmodified 990.49819 0.49818889 959 P12004 PCNA Proliferating cell nuclear antigen yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.64 3.73 1 3 10 2 1 1 1 1 1 1 1 1 1 1 1 1 15.289 15.078 2 0.003237 5517 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.709 40.077 211890000 58828000 113000000 1384300 1247000 934180 3213700 1347600 1540200 0 1725500 0 3389600 2977800 5919400 16384000 32839 959 29998 275767;275768;275769;275770;275771;275772;275773;275774;275775;275776;275777;275778;275779;275780 218540;218541;218542;218543;218544;218545;218546;218547;218548 218544 9 LSQVEGEHQLWK Unmodified 1452.7361 0.73612775 1575 P49454 CENPF Centromere protein F yes yes 0 0 0 By MS/MS 2 0 1 1 52.586 48.665 3 0.016944 61160 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 42.976 21.345 4424400 0 0 4424400 0 0 0 0 0 0 0 0 0 0 0 0 32840 1575 29999 275781 218549 218549 1 LSQVPDNPPDYQK Unmodified 1499.7256 0.72562264 1539 P48449 LSS Lanosterol synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 42.897 43.144 2 1.2241E-06 47415 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 92.239 77.941 74630000 0 0 0 0 7223900 0 7124700 6564400 0 8147200 0 16558000 11261000 0 17751000 32841 1539 30000 275782;275783;275784;275785;275786;275787;275788;275789 218550;218551;218552;218553;218554;218555;218556;218557 218554 8 LSQVPMSALK Unmodified 1072.5951 0.59506616 3091 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching 10 0 8 1 1 1 1 1 1 1 1 56.785 57.025 2 0.0046574 65096 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 72.042 41.305 56867000 0 0 0 0 0 5788700 5887900 6788000 5265800 0 10582000 15376000 7178600 0 0 32842 3091 30001 275790;275791;275792;275793;275794;275795;275796;275797 218558;218559;218560;218561 218558 4 LSQVPMSALK Oxidation (M) 1088.59 0.58998078 3091 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 yes yes 0 1 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 17 1 1 2 1 1 1 2 2 2 2 1 1 39.438 39.667 2 0.0046468 44285 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 63.397 35.515 72196000 0 0 0 3073500 2267500 6337600 4842400 3345900 2942300 8878800 11017000 11652000 9586500 3310300 4942900 32843 3091 30001 275798;275799;275800;275801;275802;275803;275804;275805;275806;275807;275808;275809;275810;275811;275812;275813;275814 218562;218563;218564;218565;218566;218567;218568;218569;218570 218562 4697 8 LSQVSDSVSGQTVVDPK Unmodified 1744.8843 0.88430813 601 O94906 PRPF6 Pre-mRNA-processing factor 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 50.324 50.624 2 8.8239E-38 57262 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 137.8 122.04 330340000 0 0 0 0 0 31828000 27222000 23837000 20955000 36548000 41108000 44501000 33698000 35518000 35124000 32844 601 30002 275815;275816;275817;275818;275819;275820;275821;275822;275823;275824;275825 218571;218572;218573;218574;218575;218576;218577;218578;218579;218580;218581;218582;218583 218573 13 LSQYFEK Unmodified 913.45453 0.45453316 2867 Q6BDS2 UHRF1BP1 UHRF1-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 35.303 35.668 2 0.02468 38681 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 82.305 30.733 151130000 0 0 0 0 0 0 0 20285000 10083000 14882000 0 22781000 31377000 17392000 34333000 32845 2867 30003 275826;275827;275828;275829;275830;275831;275832 218584;218585;218586;218587 218587 4 LSQYLDSSQVK Unmodified 1266.6456 0.6455814 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.91 3.42 2 1 8 2 1 1 1 1 1 1 1 1 1 43.587 42.443 2 5.477E-08 51779 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 147.75 85.646 1044100000 0 739930000 6890000 24499000 0 47595000 0 32708000 0 38055000 36742000 0 35391000 34387000 47916000 32846 3641 30004 275833;275834;275835;275836;275837;275838;275839;275840;275841;275842;275843 218588;218589;218590;218591;218592;218593;218594;218595;218596;218597;218598 218594 9 LSRATVGTNLR Unmodified 1186.6782 0.67821894 5369 yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 13 1 1 1 1 2 1 1 1 1 1 2 40.806 40.982 3 0.015823 45954 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 32.329 0.73247 + 330420000 0 0 0 29582000 12557000 33331000 15732000 113070000 15698000 25874000 13766000 0 36465000 10389000 23952000 32847 5369 30005 275844;275845;275846;275847;275848;275849;275850;275851;275852;275853;275854;275855;275856 218599;218600;218601 218600 2 LSRDITVESK Unmodified 1146.6245 0.62445203 4031 Q99598 TSNAX Translin-associated protein X yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 2 3 2 28.638 24.304 2;3 4.111E-05 30757 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 134.57 67.874 1087500000 241390000 528380000 317700000 0 0 0 0 0 0 0 0 0 0 0 0 32848 4031 30006 275857;275858;275859;275860;275861;275862;275863 218602;218603;218604;218605;218606 218606 3 LSREEPSNPFLAFVEK Unmodified 1861.9574 0.95741349 3061 Q7LBC6 KDM3B Lysine-specific demethylase 3B yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 86.858 86.295 3 5.5972E-05 100024 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 75.574 69.67 149360000 13153000 0 0 2864800 2513900 9395500 3265700 14447000 10080000 12379000 10537000 9635100 4779400 8848600 47459000 32849 3061 30007 275864;275865;275866;275867;275868;275869;275870;275871;275872;275873;275874;275875;275876 218607;218608;218609;218610;218611;218612;218613;218614;218615;218616;218617 218613 9 LSRGMPPLEIVPENIK Unmodified 1791.9917 0.99169051 488 O75376 NCOR1 Nuclear receptor corepressor 1 yes yes 0 0 1 By MS/MS 2 0 1 1 87.088 78.957 3 0.00020426 102875 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.25 44.045 17391000 17391000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32850 488 30008 275877 218618;218619 218618 2 LSRHGSGADSDYENTQSGDPLLGLEGK Unmodified 2802.3056 0.30564367 5126 Q9Y2X7 GIT1 ARF GTPase-activating protein GIT1 yes yes 0 0 1 By MS/MS 2 0 1 1 73.792 65.596 4 0.00019582 86878 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 24.395 20.667 7543400 7543400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32851 5126 30009 275878 218620 218620 1 LSRLCEQDK Unmodified 1147.5656 0.56555694 4489 Q9HAU0 PLEKHA5 Pleckstrin homology domain-containing family A member 5 yes yes 0 0 1 By MS/MS By matching 2 0 2 1 1 15.405 12.147 3 0.038008 17941 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.221 24.024 25729000 24021000 0 1708600 0 0 0 0 0 0 0 0 0 0 0 0 32852 4489 30010 275879;275880 218621 218621 0 LSRLSAEEQAK Unmodified 1230.6568 0.65681479 3994 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a yes yes 0 0 1 By MS/MS By MS/MS By matching 2 0 3 1 1 1 22.745 18.811 2 1.3702E-08 26528 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 154.15 92.471 91953000 80829000 8180400 2943700 0 0 0 0 0 0 0 0 0 0 0 0 32853 3994 30011 275881;275882;275883 218622;218623;218624 218623 3 LSRPFQNQTHAK Unmodified 1425.7477 0.74769548 1489;1490 P45984;P45983;P53779 MAPK9;MAPK8;MAPK10 Mitogen-activated protein kinase 9;Mitogen-activated protein kinase 8;Mitogen-activated protein kinase 10 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 17.512 17.561 3 0.024966 17416 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 35.523 26.569 16063000 0 0 0 2563200 0 3308400 2847500 2720400 1796200 2827500 0 0 0 0 0 32854 1490;1489 30012 275884;275885;275886;275887;275888;275889 218625;218626 218626 1 LSRQEAVALLQGQR Unmodified 1567.8794 0.87943794 1499 P46108 CRK Adapter molecule crk yes yes 0 0 1 By MS/MS 10 0 1 1 64.144 64.708 3 0.011049 73255 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.037 41.006 9729000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9729000 32855 1499 30013 275890 218627 218627 0 LSRWPECNALSR Unmodified 1487.7303 0.73033086 2465 Q14CX7 NAA25 N-alpha-acetyltransferase 25, NatB auxiliary subunit yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 50.318 50.483 3 6.6621E-08 56699 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 116.84 92.279 20395000 0 0 0 0 0 0 0 20395000 0 0 0 0 0 0 0 32856 2465 30014 275891;275892 218628;218629 218628 2 LSSAENDRDILRR Unmodified 1543.8067 0.80666693 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 1 2 2 2 2 2 2 2 2 30.469 30.665 3;4 0.01065 32886 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 53.448 34.204 855900000 0 0 0 39852000 29230000 79426000 25197000 75281000 54937000 78841000 81056000 104700000 82703000 71679000 133010000 32857 2556 30015 275893;275894;275895;275896;275897;275898;275899;275900;275901;275902;275903;275904;275905;275906;275907;275908;275909;275910;275911;275912;275913;275914;275915 218630;218631;218632;218633;218634;218635;218636 218633 2 LSSAMSAAK Oxidation (M) 880.43242 0.43241751 1422 P40925 MDH1 Malate dehydrogenase, cytoplasmic yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3.17 3.1 3 6 1 2 3 6 1 1 1 32.353 31.147 1;2 0.0025159 5802 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.05 84.761 1340700000 143010000 1142400000 28063000 0 0 0 0 0 0 0 8675000 0 0 0 18570000 32858 1422 30016 275916;275917;275918;275919;275920;275921;275922;275923;275924;275925;275926;275927 218637;218638;218639;218640;218641;218642;218643;218644;218645;218646;218647 218640 2238 10 LSSAMSAAK Unmodified 864.4375 0.43750288 1422 P40925 MDH1 Malate dehydrogenase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 6.57 3.96 3 4 1 1 1 1 1 1 1 16.253 15.012 2 0.0066804 18942 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.83 44.192 4082300000 216770000 3705600000 20305000 0 0 0 0 0 0 0 28450000 15221000 0 15023000 80910000 32859 1422 30016 275928;275929;275930;275931;275932;275933;275934 218648;218649;218650;218651 218649 4 LSSANGHEERSK Unmodified 1313.6324 0.63239096 2410 Q14498 RBM39 RNA-binding protein 39 yes yes 0 0 1 By MS/MS 2 0 1 1 5.6169 2.2394 3 0.030084 5085 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.997 53.551 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32860 2410 30017 275935 218652 218652 1 LSSARPGGLGSSSLYGLGASRPR Unmodified 2245.1927 0.19272659 69;88 CON__P08729;CON__Q3KNV1;P08729 KRT7 Keratin, type II cytoskeletal 7 no no 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 60.935 61.174 4 0.0050643 69859 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 27.928 19.109 + 52859000 0 0 0 0 0 11202000 0 12989000 0 0 0 0 0 5529800 23138000 32861 69;88 30018 275936;275937;275938;275939 218653;218654 218654 2 LSSAVVFGGGEAR Unmodified 1248.6463 0.64625011 448 O60934 NBN Nibrin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.56 1 1 13 2 1 1 1 2 1 1 1 1 2 1 1 57.37 56.778 2 3.3368E-05 63589 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 112.83 82.579 124770000 0 23753000 0 0 4936300 9130400 7602700 2556700 7402500 10408000 9673500 13237000 12522000 8542200 15007000 32862 448 30019 275940;275941;275942;275943;275944;275945;275946;275947;275948;275949;275950;275951;275952;275953;275954 218655;218656;218657;218658;218659;218660;218661;218662;218663;218664;218665;218666 218659 11 LSSAWPGTLR Unmodified 1086.5822 0.58219329 4948 Q9UJY1 HSPB8 Heat shock protein beta-8 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 62.691 62.864 2 0.0077573 71413 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 61.691 26.396 78912000 0 0 0 3799600 0 0 0 7551500 8250100 0 11653000 19012000 0 0 28647000 32863 4948 30020 275955;275956;275957;275958;275959;275960 218667;218668;218669;218670;218671 218670 3 LSSDCEDQIR Unmodified 1221.5296 0.52956537 3682 Q92896 GLG1 Golgi apparatus protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.325 23.529 2 0.0044145 23354 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 72.928 41.506 44502000 0 0 0 2617300 2424000 2690100 3855900 2322300 2177100 2777200 3882900 6151800 5903500 5188600 4511600 32864 3682 30021 275961;275962;275963;275964;275965;275966;275967;275968;275969;275970;275971;275972 218672;218673;218674;218675;218676;218677;218678;218679;218680;218681 218677 10 LSSDDGDSSTMR Unmodified 1269.5143 0.51430923 2891 Q6KC79 NIPBL Nipped-B-like protein yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.747 13.928 2 0.00092851 12660 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.958 69.755 21846000 0 0 0 1394800 1071800 0 1315400 835300 1205500 2756900 2901300 2796100 2470900 2533600 2564300 32865 2891 30022 275973;275974;275975;275976;275977;275978;275979;275980;275981;275982;275983;275984 218682;218683;218684;218685;218686;218687;218688;218689 218685 8 LSSDVLTLLIK Unmodified 1200.7329 0.73293985 1379 P36776 LONP1 Lon protease homolog, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 94.032 92.507 2 0.00090672 115749 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.556 77.353 30866000 13172000 9096400 0 0 0 951970 0 0 0 1413200 1081400 1177400 0 1171200 2803100 32866 1379 30023 275985;275986;275987;275988;275989;275990;275991;275992 218690;218691;218692 218692 3 LSSEHYSSQSHGNSMTELKPSSK Unmodified 2520.1551 0.15508003 4894 Q9UHB7 AFF4 AF4/FMR2 family member 4 yes yes 0 0 1 By MS/MS 2 0 1 1 37.379 30.881 4 0.0039358 43104 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 24.78 20.429 15017000 15017000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32867 4894 30024 275993 218693 218693 1 LSSELEDMKQLSK Unmodified 1506.76 0.75995923 2788 Q5T9S5 CCDC18 Coiled-coil domain-containing protein 18 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 78.659 74.957 2 0.021889 93370 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.243 5.8087 76638000 0 73711000 2927700 0 0 0 0 0 0 0 0 0 0 0 0 32868 2788 30025 275994;275995 218694 218694 1 LSSETGGMGSS Unmodified 1011.4179 0.41788965 2521 Q15366 PCBP2 Poly(rC)-binding protein 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.393 19.59 2 0.036639 20141 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 55.531 46.183 272100000 0 0 0 14960000 11185000 23454000 20348000 20123000 11833000 26670000 34264000 20955000 23367000 18122000 46818000 32869 2521 30026 275996;275997;275998;275999;276000;276001;276002;276003;276004;276005;276006;276007 218695 218695 0 LSSETGGMGSS Oxidation (M) 1027.4128 0.41280428 2521 Q15366 PCBP2 Poly(rC)-binding protein 2 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 7.6116 7.8034 2 0.0080589 4627 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 47.749 43.392 124900000 0 0 0 0 0 0 17408000 0 0 2216100 46526000 19629000 21141000 17982000 0 32870 2521 30026 276008;276009;276010;276011;276012;276013 218696;218697 218697 4155 1 LSSETYSQAK Unmodified 1112.535 0.53496832 2168 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 17.333 16.4 1;2 0.00099736 16508 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 110.87 81.722 865730000 23231000 403740000 2322000 23803000 19119000 35688000 26804000 19133000 16441000 37467000 43236000 56500000 36508000 56510000 65231000 32871 2168 30027 276014;276015;276016;276017;276018;276019;276020;276021;276022;276023;276024;276025;276026;276027;276028;276029;276030 218698;218699;218700;218701;218702;218703;218704;218705;218706;218707;218708;218709;218710;218711;218712;218713;218714;218715;218716 218712 18 LSSEVEALR Unmodified 1002.5346 0.53457439 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 41.982 42.023 2 0.012256 47088 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 61.582 24.024 27965000 0 0 0 6421800 0 0 2808500 8911000 0 3698200 0 0 6125600 0 0 32872 1029 30028 276031;276032;276033;276034;276035 218717;218718 218717 2 LSSEVEALRR Unmodified 1158.6357 0.63568542 1029 P15924 DSP Desmoplakin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 1 1 2 2 2 2 2 35.228 35.412 2;3 0.00048411 39268 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 78.655 43.114 1209900000 0 0 0 152100000 56203000 64923000 99257000 306640000 67926000 15330000 94580000 104550000 113770000 58529000 76147000 32873 1029 30029 276036;276037;276038;276039;276040;276041;276042;276043;276044;276045;276046;276047;276048;276049;276050;276051;276052;276053;276054;276055;276056;276057 218719;218720;218721;218722;218723;218724;218725;218726;218727;218728;218729;218730;218731;218732 218729 7 LSSFYSLK Unmodified 943.50148 0.50148335 1383 P36952 SERPINB5 Serpin B5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.11 3.8 6 1 12 3 2 2 1 1 1 1 1 1 1 1 1 1 1 1 62.109 60.018 1;2 0.0099951 80793 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 152.63 71.249 3511100000 1501700000 1119600000 217350000 34247000 20373000 67310000 40916000 40899000 25972000 60127000 77088000 50495000 46171000 59262000 149590000 32874 1383 30030 276058;276059;276060;276061;276062;276063;276064;276065;276066;276067;276068;276069;276070;276071;276072;276073;276074;276075;276076 218733;218734;218735;218736;218737;218738;218739;218740 218736 5 LSSGDPSTSPSLSQTTPSK Unmodified 1875.9062 0.90616578 4017 Q99504 EYA3 Eyes absent homolog 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 2 1 1 1 1 1 1 1 1 1 1 39.537 39.717 2 6.4491E-39 43198 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 134.61 120.81 75857000 0 0 0 3918700 4751900 6776400 5104400 4220900 2941000 7701500 8264800 9152900 7128100 6442400 9454200 32875 4017 30031 276077;276078;276079;276080;276081;276082;276083;276084;276085;276086;276087;276088;276089 218741;218742;218743;218744;218745;218746;218747;218748;218749;218750;218751 218744 11 LSSGFDDIDLPSAVK Unmodified 1562.7828 0.78280317 5182 Q9Y446 PKP3 Plakophilin-3 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 80.984 81.14 2 0.00089076 93787 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 74.46 49.023 54765000 0 0 0 0 0 0 16302000 24251000 0 0 0 0 0 14212000 0 32876 5182 30032 276090;276091;276092 218752 218752 0 LSSGNEENKKEEDNDEIK Unmodified 2076.9447 0.94473613 4896 Q9UHD1 CHORDC1 Cysteine and histidine-rich domain-containing protein 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.97 3.45 7 1 23 3 3 2 2 2 2 2 2 2 2 1 2 2 2 2 12.329 11.557 3;4 1.7462E-72 15240 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 176.49 170.91 1269200000 430780000 193650000 27815000 36065000 24789000 51100000 42277000 42444000 21034000 61240000 28689000 84347000 54062000 67172000 103690000 32877 4896 30033 276093;276094;276095;276096;276097;276098;276099;276100;276101;276102;276103;276104;276105;276106;276107;276108;276109;276110;276111;276112;276113;276114;276115;276116;276117;276118;276119;276120;276121;276122;276123 218753;218754;218755;218756;218757;218758;218759;218760;218761;218762;218763;218764;218765;218766;218767;218768;218769;218770;218771 218758 12 LSSGPEQITLEASSTEGHPGAPSPQHTDQTEAFQK Unmodified 3661.7132 0.71322664 2940 Q6P996 PDXDC1 Pyridoxal-dependent decarboxylase domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.181 65.269 4 2.6189E-159 74647 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 153.02 146.92 521720000 0 0 0 11681000 18278000 39609000 22600000 40775000 39006000 64777000 54872000 72285000 29144000 43270000 85422000 32878 2940 30034 276124;276125;276126;276127;276128;276129;276130;276131;276132;276133;276134;276135 218772;218773;218774;218775;218776;218777;218778;218779;218780;218781;218782;218783;218784 218773 13 LSSGPFR Unmodified 762.40244 0.40243801 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.704 29.896 2 0.01787 32329 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 113.08 86.974 191450000 0 0 0 13259000 12086000 13463000 17801000 9358700 14552000 15823000 20450000 16298000 15215000 15083000 28063000 32879 1201 30035 276136;276137;276138;276139;276140;276141;276142;276143;276144;276145;276146;276147 218785;218786;218787;218788;218789;218790;218791;218792;218793;218794;218795;218796;218797;218798;218799;218800;218801 218793 17 LSSISEK Unmodified 762.41233 0.41233399 2174 Q0JRZ9 FCHO2 F-BAR domain only protein 2 yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 14.574 10.893 2 0.028844 14702 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.541 11.444 37118000 297120 36821000 0 0 0 0 0 0 0 0 0 0 0 0 0 32880 2174 30036 276148;276149 218802 218802 1 LSSLFVK Unmodified 792.47454 0.47454032 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 56.769 55.791 2 0.022748 61485 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 104.11 0 718540000 202750000 132350000 0 21522000 21675000 37861000 0 30181000 19826000 37520000 35156000 50216000 35884000 39696000 53895000 32881 3641 30037 276150;276151;276152;276153;276154;276155;276156;276157;276158;276159;276160;276161;276162 218803;218804;218805;218806;218807;218808;218809;218810;218811;218812;218813;218814 218805 12 LSSLGTGSSSGNGK Unmodified 1250.6103 0.61025853 2714 Q56P03 EAPP E2F-associated phosphoprotein yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 18.78 14.746 2 0.00082209 19121 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.255 62.877 33943000 4731900 29211000 0 0 0 0 0 0 0 0 0 0 0 0 0 32882 2714 30038 276163;276164 218815;218816 218816 2 LSSLIIGPSK Unmodified 1013.6121 0.61209643 3640 Q92615 LARP4B La-related protein 4B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.694 61.794 2 0.0024343 70365 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 83.647 60.718 148370000 0 0 0 8609900 8700400 10966000 11234000 9612100 11190000 11908000 18239000 15458000 11444000 11762000 19246000 32883 3640 30039 276165;276166;276167;276168;276169;276170;276171;276172;276173;276174;276175;276176 218817;218818;218819;218820;218821;218822;218823;218824;218825;218826;218827;218828 218818 12 LSSLLEQGSHER Unmodified 1354.6841 0.68409218 4997 Q9ULJ3 ZBTB21 Zinc finger and BTB domain-containing protein 21 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 37.364 37.604 3 0.0032314 41590 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 49.632 39.26 90634000 0 0 0 0 5822200 7775200 7731900 6484800 4081400 6512800 9230700 11971000 12173000 7957100 10894000 32884 4997 30040 276177;276178;276179;276180;276181;276182;276183;276184;276185;276186;276187 218829;218830;218831;218832;218833;218834 218833 6 LSSLNQDNSLAEDNLK Unmodified 1759.8588 0.85882166 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.744 56.865 2 0 64378 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 266.74 245.34 556940000 0 0 0 23692000 32694000 36633000 46328000 48409000 39946000 44236000 48276000 67811000 46699000 38234000 83978000 32885 2556 30041 276188;276189;276190;276191;276192;276193;276194;276195;276196;276197;276198;276199 218835;218836;218837;218838;218839;218840;218841;218842;218843;218844;218845;218846;218847;218848;218849 218841 15 LSSLPFQK Unmodified 918.51747 0.51746776 1867 P61970 NUTF2 Nuclear transport factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.47 3.59 3 2 10 2 2 1 1 1 1 1 1 1 1 1 1 1 58.185 56.453 2 0.0025595 76244 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 120.65 18.954 4115600000 1701800000 1839100000 102590000 48958000 0 20381000 0 17078000 7056600 18513000 59467000 64541000 15046000 53664000 167300000 32886 1867 30042 276200;276201;276202;276203;276204;276205;276206;276207;276208;276209;276210;276211;276212;276213;276214 218850;218851;218852;218853;218854;218855;218856;218857;218858;218859;218860;218861;218862;218863;218864;218865 218857 15 LSSLSSLGDSAPER Unmodified 1417.7049 0.7048872 252 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 yes yes 0 0 0 By MS/MS 10 0 1 1 36.963 36.978 2 0.026608 41025 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 42.743 13.656 6769000 0 0 0 0 0 6769000 0 0 0 0 0 0 0 0 0 32887 252 30043 276215 218866 218866 1 LSSLTTGAINMLDR Oxidation (M) 1506.7712 0.77119262 5328 yes yes 0 1 0 By MS/MS By MS/MS 2 0 3 2 1 75.586 71.377 2 0.0011878 89297 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.15 36.399 + 343440000 0 339640000 3798500 0 0 0 0 0 0 0 0 0 0 0 0 32888 5328 30044 276216;276217;276218 218867;218868 218867 6724 2 LSSNLGGPGSSR Unmodified 1130.568 0.56799978 1546 P48634 PRRC2A Protein PRRC2A yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 24.017 24.163 2 0.00015234 24721 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 85.958 43.089 49537000 0 0 0 3646100 3615800 3303000 5323600 3882000 3169300 5917400 4397500 10529000 5753300 0 0 32889 1546 30045 276219;276220;276221;276222;276223;276224;276225;276226;276227;276228;276229 218869;218870;218871;218872;218873;218874;218875;218876;218877 218876 9 LSSPATLNSR Unmodified 1044.5564 0.55637247 54 CON__P00761 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.45 3.11 3 1 16 1 2 1 2 2 1 1 1 1 1 2 2 1 1 1 32.76 32.106 2 8.3347E-08 34249 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 151.44 98.275 + 116210000000 1081800000 3124500000 72620 11509000000 9173000000 7181200000 9202600000 6521000000 7220900000 9827200000 12839000000 15136000000 8461800000 6553600000 8378100000 32890 54 30046 276230;276231;276232;276233;276234;276235;276236;276237;276238;276239;276240;276241;276242;276243;276244;276245;276246;276247;276248;276249 218878;218879;218880;218881;218882;218883;218884;218885;218886;218887;218888;218889;218890;218891;218892;218893;218894;218895;218896;218897;218898;218899;218900;218901;218902;218903;218904;218905;218906;218907;218908;218909;218910;218911;218912;218913 218900 35 LSSQISAGEEK Unmodified 1147.5721 0.57208211 3147 Q86UE4 MTDH Protein LYRIC yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 24.562 22.544 2 3.5425E-12 28722 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 154.01 87.582 72942000 0 70959000 0 0 0 0 0 1982500 0 0 0 0 0 0 0 32891 3147 30047 276250;276251;276252 218914;218915;218916;218917;218918 218915 5 LSSQISDLLTRPTPALNSGGGK Unmodified 2211.1859 0.18590988 2893 Q6MZP7 LIN54 Protein lin-54 homolog yes yes 0 0 1 By MS/MS By matching By MS/MS 10 0 3 1 1 1 79.176 79.318 3 0.00083308 91258 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.806 33.76 11943000 0 0 0 0 0 3355100 0 0 1885300 0 0 0 0 0 6702300 32892 2893 30048 276253;276254;276255 218919 218919 0 LSSQITLLEAQNR Unmodified 1471.7995 0.79945628 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.897 69.974 2 0.0010666 80508 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 65.5 44.723 62857000 0 0 0 2660000 3269500 4157300 5728000 3560000 5959400 5401000 8216000 5877000 4887400 6219600 6922000 32893 2446 30049 276256;276257;276258;276259;276260;276261;276262;276263;276264;276265;276266;276267 218920;218921;218922;218923;218924;218925;218926;218927;218928;218929;218930;218931 218920 12 LSSSAIPHLHSEALK Unmodified 1588.8573 0.85730551 3324 Q8N3P4 VPS8 Vacuolar protein sorting-associated protein 8 homolog yes yes 0 0 0 By MS/MS 2 0 2 2 63.804 55.525 3;4 0.0041913 75008 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 38.337 28.49 29980000 29980000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32894 3324 30050 276268;276269 218932;218933 218933 0 LSSSASREPYK Unmodified 1223.6146 0.61461563 3926 Q96MU7 YTHDC1 YTH domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.896 13.051 3 0.032305 12276 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 28.283 13.139 96130000 0 0 0 5553500 7059900 9297200 6564000 5097200 6787200 9293500 4717700 13046000 10579000 6611300 11523000 32895 3926 30051 276270;276271;276272;276273;276274;276275;276276;276277;276278;276279;276280;276281 218934;218935 218935 1 LSSSDAPAQDTGSSAAAVETDASR Unmodified 2293.0306 0.030591025 3101 Q7Z4S6 KIF21A Kinesin-like protein KIF21A yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 1 2 1 1 2 1 2 1 2 1 2 44.225 44.442 2;3 1.4515E-102 48893 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 167.28 141.17 167530000 0 0 0 9798400 10466000 21614000 13088000 0 19976000 12948000 27361000 8934900 10150000 0 33194000 32896 3101 30052 276282;276283;276284;276285;276286;276287;276288;276289;276290;276291;276292;276293;276294;276295;276296;276297;276298 218936;218937;218938;218939;218940;218941;218942;218943;218944;218945;218946;218947;218948;218949;218950;218951 218940 15 LSSSDAPAQDTGSSAAAVETDASRTGAQQK Unmodified 2906.349 0.34896505 3101 Q7Z4S6 KIF21A Kinesin-like protein KIF21A yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 48.649 43.387 3 3.1135E-91 56216 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 132.69 127.24 149450000 0 149450000 0 0 0 0 0 0 0 0 0 0 0 0 0 32897 3101 30053 276299;276300 218952;218953 218952 2 LSSSDRYSDASDDSFSEPR Unmodified 2119.893 0.89303491 4598 Q9NRF8 CTPS2 CTP synthase 2 yes yes 0 0 1 By MS/MS By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 41.097 41.612 3 1.0389E-05 45449 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.25 60.633 22549000 0 0 0 0 0 0 0 0 0 0 3741900 3774800 2781800 3564500 8685900 32898 4598 30054 276301;276302;276303;276304;276305 218954;218955 218954 2 LSSSDRYSDASDDSFSEPRIAELEIS Unmodified 2875.2996 0.29955524 4598 Q9NRF8 CTPS2 CTP synthase 2 yes yes 0 0 2 By MS/MS 2 0 1 1 85.56 77.429 3 1.2234E-18 100981 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.109 54.604 37016000 37016000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32899 4598 30055 276306 218956 218956 1 LSSSFSSR Unmodified 869.4243 0.42429566 4605 Q9NRL2 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A yes yes 0 0 0 By MS/MS 10 0 1 1 21.816 22.163 2 0.017693 23420 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 65.252 3.2898 522940000 0 0 0 0 0 0 0 0 0 0 0 0 522940000 0 0 32900 4605 30056 276307 218957 218957 1 LSSSMNSIK Unmodified 965.48518 0.48518136 3217 Q8IUD2 ERC1 ELKS/Rab6-interacting/CAST family member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 26.263 26.493 2 0.045968 27667 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 43.083 24.3 39307000 0 0 0 0 2482500 3021800 2131300 2745200 1803400 4124400 5841900 5833300 2342700 0 8980100 32901 3217 30057 276308;276309;276310;276311;276312;276313;276314;276315;276316;276317 218958 218958 1 LSSSMYSSQGSSGSSQSK Unmodified 1793.7738 0.7737714 2558 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.065 23.271 2 2.6167E-07 23857 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 97.551 91.58 43829000 0 0 0 2712800 2691700 3711000 2427000 2916900 2038500 1885700 4391400 4784100 5158700 4717500 6393600 32902 2558 30058 276318;276319;276320;276321;276322;276323;276324;276325;276326;276327;276328;276329 218959;218960;218961;218962;218963;218964;218965;218966 218965 8 LSSSPGLFGAFSVR Unmodified 1423.746 0.74596415 2810 Q5VT52 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 85.765 85.821 2 0.00031172 99295 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 78.692 62.06 86619000 0 0 0 2450100 3868900 7235400 5489900 7242900 0 9511800 7771400 13437000 6120700 8375800 15114000 32903 2810 30059 276330;276331;276332;276333;276334;276335;276336;276337;276338;276339;276340 218967;218968;218969;218970;218971;218972;218973;218974;218975;218976;218977 218972 11 LSSSQGTIETSLQDIDSR Unmodified 1935.9385 0.93852854 4897 Q9UHD2 TBK1 Serine/threonine-protein kinase TBK1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 72.83 72.891 2 2.8355E-20 83380 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 103.76 83.38 48286000 0 0 0 3048900 0 8288100 0 0 0 8158100 0 8244600 5738800 5062200 9745600 32904 4897 30060 276341;276342;276343;276344;276345;276346;276347;276348;276349;276350 218978;218979;218980;218981;218982;218983;218984;218985;218986;218987 218980 9 LSSSSATLLNSPDR Unmodified 1446.7314 0.7314363 2398 Q14244 MAP7 Ensconsin yes yes 0 0 0 By MS/MS 10 0 1 1 49.589 49.059 2 0.02465 55848 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 47.062 7.8091 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32905 2398 30061 276351 218988 218988 1 LSSSVSAMR Oxidation (M) 952.46478 0.46478027 456 O75122 CLASP2 CLIP-associating protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching 10 0 7 1 1 1 1 1 1 1 14.3 14.54 2 0.022885 14038 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 46.39 19.253 43253000 0 0 0 0 0 5337400 0 6955300 0 5754900 6146100 7978000 6355800 4725000 0 32906 456 30062 276352;276353;276354;276355;276356;276357;276358 218989;218990;218991 218989 3 LSSTPPLSALGR Unmodified 1197.6717 0.67173657 3315 Q8N201 INTS1 Integrator complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.28 65.368 2 0.0092782 74550 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 48.44 27.603 77762000 0 0 0 3393200 4606400 4526200 6506800 3995500 4850700 7807300 8479400 10509000 6170300 6404700 10513000 32907 3315 30063 276359;276360;276361;276362;276363;276364;276365;276366;276367;276368;276369;276370 218992;218993;218994;218995;218996;218997;218998 218993 4 LSSTQEGVR Unmodified 975.49852 0.49852324 2828 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 11.663 11.851 2 0.014773 11015 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 57.96 15.361 32182000 0 0 0 1588400 2939700 0 0 4677300 0 0 2684000 7026100 0 4899600 8367200 32908 2828 30064 276371;276372;276373;276374;276375;276376;276377 218999;219000;219001;219002 219002 2 LSSTQEGVRK Unmodified 1103.5935 0.59348625 2828 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 8.3686 5.6276 2 0.011833 7517 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 96.027 52.809 39510000 0 19747000 19763000 0 0 0 0 0 0 0 0 0 0 0 0 32909 2828 30065 276378;276379 219003 219003 1 LSSTQQSLAEK Unmodified 1190.6143 0.61428128 3217 Q8IUD2 ERC1 ELKS/Rab6-interacting/CAST family member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9 2.65 2 14 1 1 1 1 1 1 1 3 1 1 1 1 1 1 20.926 20.269 2 4.6238E-11 21190 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 154.85 96.254 264320000 4831300 70996000 0 11994000 9474400 13778000 14001000 0 0 12119000 33819000 38325000 0 14832000 40147000 32910 3217 30066 276380;276381;276382;276383;276384;276385;276386;276387;276388;276389;276390;276391;276392;276393;276394;276395 219004;219005;219006;219007;219008;219009;219010;219011;219012;219013;219014;219015;219016;219017;219018;219019 219007 16 LSSTSLASGHSVR Unmodified 1300.6735 0.67352749 4273 Q9BZL6 PRKD2 Serine/threonine-protein kinase D2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 27.116 27.584 3 0.035374 28516 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 22.538 13.05 103060000 0 0 0 0 0 0 0 10208000 0 0 26172000 22161000 0 18793000 25722000 32911 4273 30067 276396;276397;276398;276399;276400 219020 219020 1 LSSTSVYDLTPGEK Unmodified 1495.7406 0.740604 4605 Q9NRL2 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A yes yes 0 0 0 By MS/MS 2 0 1 1 66.028 60.11 2 0.012245 76823 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.342 58.971 75645000 0 75645000 0 0 0 0 0 0 0 0 0 0 0 0 0 32912 4605 30068 276401 219021 219021 1 LSSTTQNNTGKPATSSANQK Unmodified 2033.9978 0.99777475 3775 Q96CB8 INTS12 Integrator complex subunit 12 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 8.3617 8.529 3 0.023045 7151 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 26.237 19.285 14578000 0 0 0 0 1134000 0 0 1030900 1019600 1386100 0 3327100 2737500 2143900 1799000 32913 3775 30069 276402;276403;276404;276405;276406;276407;276408;276409 219022 219022 1 LSSTWEGIQAGK Unmodified 1275.6459 0.64591575 1392 P37837 TALDO1 Transaldolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.18 3.74 3 1 7 1 2 1 1 1 1 1 1 1 1 56.508 54.573 2 5.3055E-28 72883 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 186.41 124.45 1724300000 120210000 1406400000 0 0 2773600 0 0 5887800 0 0 35293000 23465000 0 19798000 110460000 32914 1392 30070 276410;276411;276412;276413;276414;276415;276416;276417;276418;276419;276420 219023;219024;219025;219026;219027;219028;219029;219030;219031;219032 219027 10 LSSVASNGGGAGGAGGGAAGDK Unmodified 1716.8027 0.80270376 3833 Q96F45 ZNF503 Zinc finger protein 503 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.176 19.372 2 3.3403E-26 19409 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 96.414 87.684 36909000 0 0 0 3020200 1773100 2269000 2401300 3223700 1988700 2660400 3221600 4501200 2938100 2762500 6149500 32915 3833 30071 276421;276422;276423;276424;276425;276426;276427;276428;276429;276430;276431;276432 219033;219034;219035;219036;219037;219038;219039;219040;219041;219042 219040 10 LSSVVTQHDSK Unmodified 1199.6146 0.61461563 1740 P54577 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.34 3.24 6 23 2 2 2 2 2 2 2 2 2 2 2 2 1 2 2 15.937 15.333 2;3 2.8312E-47 13895 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 185.6 143 761380000 53236000 70608000 23340000 19880000 13207000 39607000 30670000 22457000 17397000 35699000 97267000 77536000 6668900 68753000 185060000 32916 1740 30072 276433;276434;276435;276436;276437;276438;276439;276440;276441;276442;276443;276444;276445;276446;276447;276448;276449;276450;276451;276452;276453;276454;276455;276456;276457;276458;276459;276460;276461 219043;219044;219045;219046;219047;219048;219049;219050;219051;219052;219053;219054;219055;219056 219049 8 LSSVVTQHDSKK Unmodified 1327.7096 0.70957864 1740 P54577 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed yes yes 0 0 1 By MS/MS By matching By MS/MS 10 0 3 1 1 1 10.023 10.316 3 0.014484 8668 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 33.782 12.023 11328000 0 0 0 0 0 0 0 0 0 0 0 4847000 1786700 0 4693900 32917 1740 30073 276462;276463;276464 219057;219058 219058 2 LSSWDQAETPGHTPSLR Unmodified 1880.9017 0.90168952 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 1 1 1 1 2 2 2 2 2 2 2 56.928 57.126 2;3 1.5464E-82 64883 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 156.49 136.4 1141000000 0 0 0 37002000 56434000 88801000 52556000 64055000 60979000 96703000 107750000 135270000 109380000 117550000 214570000 32918 516 30074 276465;276466;276467;276468;276469;276470;276471;276472;276473;276474;276475;276476;276477;276478;276479;276480;276481;276482;276483 219059;219060;219061;219062;219063;219064;219065;219066;219067;219068;219069;219070;219071;219072;219073;219074;219075;219076;219077 219060 18 LSSYEEMLQSVK Unmodified 1412.6857 0.68573166 4661 Q9NV70 EXOC1 Exocyst complex component 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 76.878 76.343 2 2.6445E-27 94319 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 185.29 163.85 151860000 0 122760000 0 0 1833500 3811500 0 0 2920800 4028100 0 0 2841100 3725600 9941200 32919 4661 30075 276484;276485;276486;276487;276488;276489;276490;276491 219078;219079;219080;219081 219079 4 LSSYEEMLQSVK Oxidation (M) 1428.6806 0.68064628 4661 Q9NV70 EXOC1 Exocyst complex component 1 yes yes 0 1 0 By MS/MS 2 0 1 1 58.029 52.198 2 0.0028376 67190 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.335 68.216 16161000 0 16161000 0 0 0 0 0 0 0 0 0 0 0 0 0 32920 4661 30075 276492 219082 219082 6075 1 LSSYLWSQR Unmodified 1138.5771 0.57710791 5312 yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 2 1 70.196 70.381 2 0.034652 80128 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.426 3.5566 + 31598000 0 0 0 0 2001000 0 0 2420400 3122800 0 0 13638000 0 0 10416000 32921 5312 30076 276493;276494;276495;276496;276497;276498 219083;219084 219083 2 LSTACPGR Unmodified 860.41744 0.41743614 1754 P55060 CSE1L Exportin-2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 12.97 13.13 2 0.013529 12333 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 72.138 34.493 73639000 0 0 0 0 4214800 11680000 6423700 3721200 4626600 7900600 8974000 8666900 7997800 9433200 0 32922 1754 30077 276499;276500;276501;276502;276503;276504;276505;276506;276507;276508 219085;219086;219087;219088 219085 4 LSTAITLLPLEEGR Unmodified 1511.8559 0.85590853 3156 Q86UU1 PHLDB1 Pleckstrin homology-like domain family B member 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 88.064 88.078 2 0.00045563 102173 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 69.979 26.435 8657200 0 0 0 592120 0 2476300 1424000 0 0 3043300 0 0 1121500 0 0 32923 3156 30078 276509;276510;276511;276512;276513 219089;219090;219091;219092 219090 3 LSTASEETVQNR Unmodified 1333.6474 0.64737232 321 O43379 WDR62 WD repeat-containing protein 62 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 21.79 22.233 2 0.0061997 23245 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 85.958 63.218 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32924 321 30079 276514;276515;276516 219093;219094;219095 219095 3 LSTDHIPILYR Unmodified 1326.7296 0.7295858 2125 Q06210 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 71.933 72.01 3 0.00016764 82806 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 73.885 48.264 158790000 0 0 0 4424100 4167100 0 6405900 11098000 8897500 12998000 14069000 19535000 10151000 16081000 50963000 32925 2125 30080 276517;276518;276519;276520;276521;276522;276523;276524;276525;276526;276527 219096;219097;219098;219099;219100;219101;219102;219103;219104;219105 219100 10 LSTDTVEHSLDNK Unmodified 1457.6998 0.69980182 1459 P42575 CASP2 Caspase-2;Caspase-2 subunit p18;Caspase-2 subunit p13;Caspase-2 subunit p12 yes yes 0 0 0 By MS/MS 10 0 1 1 42.739 42.787 3 0.01874 47991 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 40.751 32.647 7947000 0 0 0 0 0 7947000 0 0 0 0 0 0 0 0 0 32926 1459 30081 276528 219106 219106 0 LSTEADTDTPK Unmodified 1176.551 0.55101232 4254 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 19.376 19.943 2 0.0052215 20219 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 70.1 40.433 8861100 0 0 0 0 0 0 0 0 0 0 3621600 0 0 0 5239500 32927 4254 30082 276529;276530 219107 219107 1 LSTEQIPILYR Unmodified 1331.7449 0.74490152 588 O94808 GFPT2 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.88 79.983 2 0.0069617 92163 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.235 35.245 35577000 0 0 0 0 2062200 2313900 2206200 3509800 2299300 3451000 3369100 4080800 2496900 3125800 6661500 32928 588 30083 276531;276532;276533;276534;276535;276536;276537;276538;276539;276540;276541 219108;219109;219110;219111 219110 4 LSTFGNAGSSHLDYPK Unmodified 1692.8107 0.81074925 422 O60671 RAD1 Cell cycle checkpoint protein RAD1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 54.783 55.086 3 3.8972E-05 61791 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.476 58.039 90712000 0 0 0 0 0 7664500 6618200 0 0 7076400 17415000 11259000 9058500 10229000 21391000 32929 422 30084 276542;276543;276544;276545;276546;276547;276548;276549 219112;219113;219114;219115;219116;219117;219118;219119;219120;219121 219117 10 LSTGVFRPQLDEPIPLYEAK Unmodified 2272.2103 0.21033371 696 O95825 CRYZL1 Quinone oxidoreductase-like protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 91.472 83.342 3 5.4206E-05 108099 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.737 42.695 45763000 45763000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32930 696 30085 276550 219122 219122 1 LSTIMEQQISSAAQDK Unmodified 1748.8615 0.86146419 1026 P15822 HIVEP1 Zinc finger protein 40 yes yes 0 0 0 By MS/MS 2 0 1 1 71.532 65.804 2 1.6606E-50 83484 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 163.99 122.29 54748000 0 54748000 0 0 0 0 0 0 0 0 0 0 0 0 0 32931 1026 30086 276551 219123 219123 1 LSTLCPSAVLQR Unmodified 1343.7231 0.72312022 3170 Q86VP6 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.299 71.372 2 0.00013039 81300 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.898 74.851 69144000 0 0 0 2584100 3408300 9277700 4250200 5809300 1607100 6363400 5839300 3292800 3100400 6077300 17534000 32932 3170 30087 276552;276553;276554;276555;276556;276557;276558;276559;276560;276561;276562;276563 219124;219125;219126;219127;219128;219129;219130;219131 219128 8 LSTLPITVDILAETGVGK Unmodified 1826.0401 0.040080486 2397 Q14241 TCEB3 Transcription elongation factor B polypeptide 3 yes yes 0 0 0 By MS/MS 2 0 1 1 99.576 94.864 2 0.0033497 117390 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 50.088 37.655 11347000 0 11347000 0 0 0 0 0 0 0 0 0 0 0 0 0 32933 2397 30088 276564 219132 219132 1 LSTLVETTLK Unmodified 1103.6438 0.64379049 1709 P53041 PPP5C Serine/threonine-protein phosphatase 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 63.228 62.379 2 3.3525E-05 80884 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 135.71 111.94 1900500000 0 1867200000 0 0 0 0 0 0 0 0 8270200 4330900 0 5197800 15488000 32934 1709 30089 276565;276566;276567;276568;276569 219133;219134;219135;219136;219137 219133 4 LSTPSTGGSVDIISVK Unmodified 1559.8407 0.8406524 2195 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72.596 72.108 2 0.00012566 82836 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 89.959 72.523 230080000 0 127380000 1266200 5845500 7249900 10419000 7940400 7206400 6469200 12069000 8154100 11146000 7130300 6583300 11220000 32935 2195 30090 276570;276571;276572;276573;276574;276575;276576;276577;276578;276579;276580;276581;276582;276583 219138;219139;219140;219141;219142;219143;219144;219145;219146;219147;219148;219149;219150 219140 13 LSTQEGLVQELQK Unmodified 1471.7882 0.7882229 4199 Q9BW19 KIFC1 Kinesin-like protein KIFC1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.984 66.068 2 4.9737E-09 74683 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 135.86 107.65 159950000 0 0 0 7486400 7758300 11821000 10395000 11229000 10691000 15342000 16905000 18503000 14109000 13569000 22143000 32936 4199 30091 276584;276585;276586;276587;276588;276589;276590;276591;276592;276593;276594;276595 219151;219152;219153;219154;219155;219156;219157;219158;219159;219160;219161;219162 219158 12 LSTQSNSNNIEPAR Unmodified 1529.7434 0.74339797 2424 Q14669 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 26.29 26.447 2 4.4022E-05 28482 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 84.658 68.768 57501000 0 0 0 3138500 4137800 6548700 5601400 5123900 3735100 6777400 7920500 5939700 4697100 3881200 0 32937 2424 30092 276596;276597;276598;276599;276600;276601;276602;276603;276604;276605;276606 219163;219164;219165;219166;219167;219168;219169;219170;219171;219172;219173 219173 11 LSTSGNRPPANAETFSCNK Unmodified 2049.9538 0.95380145 28 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37.467 36.587 3 1.0405E-06 40555 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 76.155 66.405 328730000 193540000 20453000 19101000 6031800 6237000 8081200 7098500 6102200 5328700 7095800 7075100 8920900 11108000 10686000 11868000 32938 28 30093 276607;276608;276609;276610;276611;276612;276613;276614;276615;276616;276617;276618;276619;276620;276621 219174;219175;219176;219177;219178;219179;219180;219181;219182;219183;219184;219185;219186;219187;219188;219189 219175 16 LSTSQDAACK Unmodified 1079.4917 0.4917233 2727 Q5H9R7 PPP6R3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 10.694 7.4297 2 0.013497 11802 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.635 76.107 7052100 0 7052100 0 0 0 0 0 0 0 0 0 0 0 0 0 32939 2727 30094 276622;276623 219190;219191 219191 2 LSTSSETVSSTAASK Unmodified 1454.71 0.71003215 4804 Q9P242 NYAP2 Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 24.045 24.293 2 0.0017196 24241 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 76.522 55.059 6056600 0 0 0 0 0 0 4142900 0 0 0 1913600 0 0 0 0 32940 4804 30095 276624;276625;276626;276627 219192;219193;219194 219194 3 LSTTDRVVK Unmodified 1017.5819 0.58185894 2151 Q08209 PPP3CA Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 21.598 17.767 2 0.010568 25524 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 106.42 54.993 255670000 155410000 50930000 49326000 0 0 0 0 0 0 0 0 0 0 0 0 32941 2151 30096 276628;276629;276630 219195 219195 0 LSTTEPVISISSNNAVIELAK Unmodified 2185.1842 0.18417854 4680 Q9NVR5 DNAAF2 Protein kintoun yes yes 0 0 0 By MS/MS 2 0 2 2 91.92 87.01 2;3 0.011059 108185 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 56.793 26.986 38758000 0 38758000 0 0 0 0 0 0 0 0 0 0 0 0 0 32942 4680 30097 276631;276632 219196;219197 219197 2 LSTTPSPTSSLHEDGVEDFRR Unmodified 2330.1139 0.11386714 592 O94842 TOX4 TOX high mobility group box family member 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 2 1 1 1 1 1 57.226 57.469 3;4 2.9156E-10 64577 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.027 56.44 159190000 0 0 0 0 0 12504000 8105500 19638000 23363000 18140000 0 23550000 0 22184000 31706000 32943 592 30098 276633;276634;276635;276636;276637;276638;276639;276640;276641 219198;219199;219200;219201;219202;219203;219204;219205;219206;219207;219208;219209 219202 12 LSTVGWASQK Unmodified 1075.5662 0.56620887 4769 Q9NZJ0 DTL Denticleless protein homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 46.924 45.002 2 0.0067265 49479 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.191 14.065 60851000 37928000 0 2830100 3589200 0 4092800 0 0 0 3944600 0 0 0 0 8466200 32944 4769 30099 276642;276643;276644;276645;276646;276647;276648 219210;219211;219212;219213 219211 4 LSVAAQEAAR Unmodified 1014.5458 0.54580778 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 27.419 27.623 2 0.043998 29149 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 38.804 15.913 54316000 0 0 0 19300000 0 0 0 12337000 0 0 0 22679000 0 0 0 32945 2501 30100 276649;276650;276651 219214 219214 1 LSVADSQAEAK Unmodified 1117.5615 0.56151742 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24.649 24.126 2 4.1961E-05 26326 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 116.52 79.961 594540000 22797000 211640000 0 23106000 25328000 31180000 27029000 32179000 17548000 32467000 22021000 40519000 30459000 31182000 47084000 32946 3641 30101 276652;276653;276654;276655;276656;276657;276658;276659;276660;276661;276662;276663;276664;276665 219215;219216;219217;219218;219219;219220;219221;219222;219223;219224;219225;219226;219227;219228 219228 12 LSVAPEMDIMDYCK Unmodified 1670.7354 0.73540074 3761 Q96BN8 OTULIN Ubiquitin thioesterase otulin yes yes 0 0 0 By MS/MS 2 0 1 1 87.764 82.922 2 0.0015908 103058 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.507 69.174 27013000 0 27013000 0 0 0 0 0 0 0 0 0 0 0 0 0 32947 3761 30102 276666 219229 219229 1 LSVASTPISQR Unmodified 1157.6404 0.64043645 4233 Q9BXS6 NUSAP1 Nucleolar and spindle-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 46.601 46.764 2 0.0069512 52348 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 58.592 35.852 54998000 0 0 0 5827700 0 6137800 0 6701000 3941300 8962300 10792000 12635000 0 0 0 32948 4233 30103 276667;276668;276669;276670;276671;276672;276673;276674 219230;219231;219232;219233 219232 4 LSVDEVSSPSTPEAPDIPACPSPGQK Unmodified 2664.2589 0.2588764 4356 Q9H211 CDT1 DNA replication factor Cdt1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 75.086 75.191 3 3.9627E-06 86625 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 39.373 35.376 68461000 0 0 0 0 4827000 7236300 6471700 6378600 0 8205500 7867500 10498000 4200200 5121100 7655000 32949 4356 30104 276675;276676;276677;276678;276679;276680;276681;276682;276683;276684 219234;219235;219236;219237;219238;219239;219240;219241;219242 219242 9 LSVDYGK Unmodified 780.40177 0.4017693 1961;3031;4093;1962 P68363;Q71U36;P0DPH8;P0DPH7;Q9BQE3;P68366 TUBA1B;TUBA1A;TUBA1C;TUBA4A Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain no no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 1 2 2 2 2 2 2 2 2 2 2 2 29.477 29.691 1;2 3.1651E-15 32326 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 173.38 28.477 24072000000 0 0 0 47700000 1139200000 1660800000 1486800000 1736300000 1266800000 2488800000 2774700000 2852700000 2480800000 2192000000 3945600000 32950 1961;3031;4093;1962 30105 276685;276686;276687;276688;276689;276690;276691;276692;276693;276694;276695;276696;276697;276698;276699;276700;276701;276702;276703;276704;276705;276706;276707 219243;219244;219245;219246;219247;219248;219249;219250;219251;219252 219245 9 LSVDYGKK Unmodified 908.49673 0.49673232 1961;3031;4093;1962 P68363;Q71U36;P0DPH8;P0DPH7;Q9BQE3;P68366 TUBA1B;TUBA1A;TUBA1C;TUBA4A Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.162 21.366 2 0.040849 21015 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 104.45 70.897 2000900000 0 0 0 126080000 159670000 47849000 241560000 160990000 70824000 145530000 208650000 279190000 176820000 181340000 202350000 32951 1961;3031;4093;1962 30106 276708;276709;276710;276711;276712;276713;276714;276715;276716;276717;276718;276719 219253;219254;219255;219256 219254 0 LSVEADINGLRR Unmodified 1341.7365 0.7364621 84 CON__Q04695;Q04695 KRT17 Keratin, type I cytoskeletal 17 no no 0 0 1 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 61.263 61.314 3 0.011634 69767 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 35.737 8.3274 + 36205000 0 0 0 5320700 0 0 3692900 0 0 0 0 0 15613000 0 11578000 32952 84 30107 276720;276721;276722;276723 219257;219258 219257 2 LSVEAPPK Unmodified 839.47527 0.4752686 1728 P53990 IST1 IST1 homolog yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 37.53 31.791 2 0.016583 42304 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.9 59.43 53341000 1366400 51974000 0 0 0 0 0 0 0 0 0 0 0 0 0 32953 1728 30108 276724;276725 219259;219260;219261 219261 3 LSVEDVLTR Unmodified 1030.5659 0.56587452 4482 Q9HA65 TBC1D17 TBC1 domain family member 17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 74.011 74.178 2 0.01448 85514 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 58.23 21.848 68945000 0 0 0 0 0 6428900 0 11978000 4708600 12963000 5964200 7134200 5307500 4461300 9999600 32954 4482 30109 276726;276727;276728;276729;276730;276731;276732;276733;276734 219262;219263;219264;219265;219266;219267;219268 219262 7 LSVEESEAAGDGVDTK Unmodified 1605.737 0.73697519 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.48 1 2 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 46.298 45.424 2 1.1881E-56 53146 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 195.88 171.54 533140000 30477000 238760000 0 7155900 7108500 9847000 12772000 11276000 9946600 13888000 45085000 38081000 20322000 22555000 65866000 32955 1564 30110 276735;276736;276737;276738;276739;276740;276741;276742;276743;276744;276745;276746;276747;276748;276749;276750 219269;219270;219271;219272;219273;219274;219275;219276;219277;219278;219279;219280;219281;219282;219283;219284;219285;219286 219278 18 LSVEGFAVDK Unmodified 1063.555 0.55497548 1771 P55786 NPEPPS Puromycin-sensitive aminopeptidase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.42 3.66 3 1 8 1 2 1 1 1 1 1 1 1 1 1 69.193 67.464 2 0.0025337 85581 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.7 51.964 2099200000 75483000 1875500000 38300000 20948000 0 4414900 0 0 2324200 0 20138000 10500000 3214300 10698000 37644000 32956 1771 30111 276751;276752;276753;276754;276755;276756;276757;276758;276759;276760;276761;276762 219287;219288;219289;219290;219291;219292;219293;219294;219295;219296;219297 219288 11 LSVGLEDEEDLLEDLDQALK Unmodified 2243.1057 0.10565345 1325 P32929 CTH Cystathionine gamma-lyase yes yes 0 0 0 By MS/MS 2 0 1 1 101.04 92.906 3 1.1728E-07 119624 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.43 58.639 11981000 11981000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32957 1325 30112 276763 219298 219298 0 LSVGTNEK Unmodified 846.4447 0.44469675 1424 P40937 RFC5 Replication factor C subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 2 1 1 1 1 1 1 15.95 16.114 2 0.0067966 15314 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 96.492 53.491 525050000 0 0 0 23924000 30302000 32729000 43462000 38014000 31920000 48626000 75712000 51860000 61587000 0 86914000 32958 1424 30113 276764;276765;276766;276767;276768;276769;276770;276771;276772;276773;276774;276775 219299;219300;219301;219302;219303;219304;219305;219306 219303 1 LSVISVEDPPQR Unmodified 1338.7143 0.71432967 1394 P38117 ETFB Electron transfer flavoprotein subunit beta yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 62.377 62.316 2 2.5937E-05 71085 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 94.297 72.833 88579000 0 0 0 9297000 8071100 13991000 13430000 10209000 0 14989000 18592000 0 0 0 0 32959 1394 30114 276776;276777;276778;276779;276780;276781;276782 219307;219308;219309;219310;219311;219312 219310 6 LSVISVEDPPQRTAGVK Unmodified 1794.984 0.98396259 1394 P38117 ETFB Electron transfer flavoprotein subunit beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 66.953 60.387 2;3 2.2157E-07 80506 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.507 87.463 183940000 129740000 17310000 36884000 0 0 0 0 0 0 0 0 0 0 0 0 32960 1394 30115 276783;276784;276785;276786 219313;219314;219315 219313 3 LSVLGAITSVQQR Unmodified 1370.7882 0.78816332 1902 P62495 ETF1 Eukaryotic peptide chain release factor subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.982 82.044 2 0.00097517 94893 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 80.979 60.109 119090000 0 0 0 3634400 3620400 15447000 6793500 5283800 6929300 11492000 10608000 17221000 4457200 7088900 26514000 32961 1902 30116 276787;276788;276789;276790;276791;276792;276793;276794;276795;276796;276797;276798 219316;219317;219318;219319;219320;219321;219322;219323;219324;219325;219326 219318 11 LSVLIHNSDEHK Unmodified 1390.7205 0.72047768 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 32.041 31.976 3 0.00010885 32771 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.908 52.43 291290000 0 0 6018400 9883800 0 33303000 16920000 17676000 21071000 27283000 26542000 48376000 19367000 19420000 45429000 32962 4634 30117 276799;276800;276801;276802;276803;276804;276805;276806;276807;276808;276809;276810 219327;219328;219329;219330;219331;219332;219333;219334;219335;219336;219337;219338;219339;219340;219341;219342 219331 14 LSVLLLEK Unmodified 913.58482 0.58481905 2672 Q3LXA3 DAK Bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase (cyclizing);ATP-dependent dihydroxyacetone kinase;FAD-AMP lyase (cyclizing) yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 79.309 77.812 2 0.0068126 89860 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 95.741 53.849 560480000 301880000 40811000 141230000 0 2765600 9163200 5355400 0 0 7893100 10474000 13818000 0 7373500 19720000 32963 2672 30118 276811;276812;276813;276814;276815;276816;276817;276818;276819;276820;276821;276822;276823 219343;219344;219345;219346;219347;219348;219349;219350;219351;219352;219353;219354;219355 219343 13 LSVLQEEK Unmodified 944.51786 0.51786169 2839 Q63ZY3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 7 3.69 1 1 3 2 1 1 1 39.294 37.454 2 0.025379 48519 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.229 0 136520000 0 82354000 0 0 0 0 13847000 17594000 0 0 22723000 0 0 0 0 32964 2839 30119 276824;276825;276826;276827;276828 219356;219357;219358;219359 219357 3 LSVPASVVSR Unmodified 1013.5869 0.58694431 3250 Q8IWZ3 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 55.902 56.024 2 0.0072907 63442 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 62.823 45.71 144180000 0 0 0 8839600 8062100 10474000 10459000 0 9212000 14848000 17646000 21031000 10061000 11737000 21806000 32965 3250 30120 276829;276830;276831;276832;276833;276834;276835;276836;276837;276838;276839 219360;219361;219362;219363;219364;219365;219366 219364 2 LSVPDIPK Unmodified 867.50657 0.50656873 3933 Q96N67 DOCK7 Dedicator of cytokinesis protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.623 63.715 2 0.042547 72000 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.57 34.788 175220000 0 0 0 9766000 13505000 15625000 12360000 12146000 10256000 18758000 16617000 18093000 14605000 14958000 18533000 32966 3933 30121 276840;276841;276842;276843;276844;276845;276846;276847;276848;276849;276850;276851 219367;219368 219367 2 LSVPVTCK Unmodified 902.48954 0.48953845 2924 Q6P1R4 DUS1L tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like yes yes 0 0 0 By MS/MS 2 0 1 1 45.139 39.818 2 0.032367 51594 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.255 39.054 29931000 0 29931000 0 0 0 0 0 0 0 0 0 0 0 0 0 32967 2924 30122 276852 219369 219369 1 LSVQSAISTQPEAVK Unmodified 1556.841 0.84098675 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 62.3 62.46 2 0.009105 71669 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 49.423 24.569 29025000 0 0 0 0 0 4952000 3190100 3261000 1975100 5585300 5021200 0 5040000 0 0 32968 5049 30123 276853;276854;276855;276856;276857;276858;276859 219370;219371;219372 219372 3 LSVQSNPSPQLR Unmodified 1324.7099 0.709913 464 O75152 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 2 1 1 1 1 1 1 1 1 44.636 45.143 2 1.6019E-26 50183 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 167.93 111.68 291680000 0 0 0 0 0 0 0 0 0 0 54642000 71918000 55832000 41823000 67465000 32969 464 30124 276860;276861;276862;276863;276864;276865;276866;276867;276868;276869;276870;276871;276872 219373;219374;219375;219376;219377;219378;219379;219380;219381;219382;219383;219384 219382 12 LSVRAADGPQK Unmodified 1140.6251 0.62512073 3694 Q92979 EMG1 Ribosomal RNA small subunit methyltransferase NEP1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 23.319 19.397 2 0.00396 27354 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.47 70.376 66334000 65230000 0 1104000 0 0 0 0 0 0 0 0 0 0 0 0 32970 3694 30125 276873;276874 219385 219385 1 LSVSADLESR Unmodified 1075.551 0.55095274 4653 Q9NUQ8 ABCF3 ATP-binding cassette sub-family F member 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 49.116 49.325 2 0.01238 55525 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 52.579 26.195 22149000 0 0 0 0 6137600 0 0 0 0 0 6973200 0 0 0 9038700 32971 4653 30126 276875;276876;276877 219386 219386 1 LSVSGADTSVSSVDGPVSQK Unmodified 1918.9484 0.94836495 3867 Q96HI0 SENP5 Sentrin-specific protease 5 yes yes 0 0 0 By MS/MS 2 0 1 1 62.272 56.378 2 1.048E-71 72398 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 144.12 128.92 10075000 0 10075000 0 0 0 0 0 0 0 0 0 0 0 0 0 32972 3867 30127 276878 219387 219387 1 LSVSGPHPLPIEK Unmodified 1372.7715 0.77145062 2830 Q5VZ89 DENND4C DENN domain-containing protein 4C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.72 2 13 1 1 1 1 1 1 1 1 1 1 1 1 1 2 60.116 59.441 3 0.00087868 81695 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.462 47.601 144460000 20976000 0 6025600 7335100 6817600 9039100 5621500 6361800 6635500 11690000 12805000 13016000 11591000 12069000 14478000 32973 2830 30128 276879;276880;276881;276882;276883;276884;276885;276886;276887;276888;276889;276890;276891;276892;276893 219388;219389;219390;219391;219392;219393;219394;219395;219396 219389 7 LSVSNMVHTAK Unmodified 1185.6176 0.61759251 2484 Q15042 RAB3GAP1 Rab3 GTPase-activating protein catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 44.82 43.611 3 0.0027436 48009 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 51.841 36.693 117470000 24734000 21871000 0 5092200 4859900 8158900 7446900 8588800 0 8583300 10833000 0 9185400 8118000 0 32974 2484 30129 276894;276895;276896;276897;276898;276899;276900;276901;276902;276903;276904;276905 219397;219398;219399;219400;219401;219402;219403;219404;219405;219406;219407;219408 219402 12 LSVTVDPK Unmodified 857.48583 0.48583328 2033 Q00341 HDLBP Vigilin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.36 2.01 1 10 1 1 1 1 1 1 1 1 1 1 1 39.817 39.608 2 0.033014 44593 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 53.968 13.865 410730000 0 23392000 0 25468000 0 43698000 34107000 0 18906000 46307000 49504000 41708000 23119000 32509000 72008000 32975 2033 30130 276906;276907;276908;276909;276910;276911;276912;276913;276914;276915;276916 219409;219410;219411;219412;219413;219414 219409 6 LSVVDQEK Unmodified 916.48656 0.48656157 991 P13929 ENO3 Beta-enolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 28.157 23.83 2 0.021166 31351 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.01 62.642 554760000 17552000 535100000 2102700 0 0 0 0 0 0 0 0 0 0 0 0 32976 991 30131 276917;276918;276919 219415;219416 219415 1 LSVVEYDPGTHDLK Unmodified 1571.7831 0.78313752 2179 Q10570 CPSF1 Cleavage and polyadenylation specificity factor subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 59.881 60.153 3 0.00093982 68205 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 58.071 45.906 106160000 0 0 0 0 0 11034000 0 0 8319300 14005000 12340000 14358000 11640000 14317000 20143000 32977 2179 30132 276920;276921;276922;276923;276924;276925;276926;276927 219417;219418;219419;219420;219421;219422;219423;219424;219425 219420 9 LSVVHEK Unmodified 810.45995 0.45995289 1113 P20810 CAST Calpastatin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13.403 13.056 2 0.024805 16404 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 101.69 19.428 1638200000 939260000 0 502660000 13553000 12208000 9111400 18903000 9929400 12058000 17709000 27263000 14516000 26294000 19714000 15041000 32978 1113 30133 276928;276929;276930;276931;276932;276933;276934;276935;276936;276937;276938;276939;276940;276941 219426;219427;219428;219429 219428 4 LSWSGAPGK Unmodified 901.46577 0.46576654 4052 Q99715 COL12A1 Collagen alpha-1(XII) chain yes yes 0 0 0 By MS/MS 2 0 1 1 46.967 39.489 2 0.027921 54745 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.383 33.678 6032500 6032500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32979 4052 30134 276942 219430 219430 1 LSYEHAQSMIESPTEK Unmodified 1848.8564 0.85637882 3281 Q8IYB7 DIS3L2 DIS3-like exonuclease 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 58.881 54.039 3 5.3814E-08 70051 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.576 74.789 56075000 0 39859000 16217000 0 0 0 0 0 0 0 0 0 0 0 0 32980 3281 30135 276943;276944 219431;219432;219433;219434 219432 4 LSYEHAQSMIESPTEK Oxidation (M) 1864.8513 0.85129344 3281 Q8IYB7 DIS3L2 DIS3-like exonuclease 2 yes yes 0 1 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 45.377 40.692 3 0.0054283 50045 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 40.237 35.182 35944000 0 28329000 7615500 0 0 0 0 0 0 0 0 0 0 0 0 32981 3281 30135 276945;276946;276947 219435;219436 219435 4885 1 LSYFNELETINTK Unmodified 1570.7879 0.78788854 3890 Q96JB2 COG3 Conserved oligomeric Golgi complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 84.709 81.101 2 7.2991E-10 100770 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 153.23 135.07 77378000 0 74942000 2436100 0 0 0 0 0 0 0 0 0 0 0 0 32982 3890 30136 276948;276949 219437;219438 219437 2 LSYNTASNK Unmodified 996.48762 0.4876242 1562 P49207 RPL34 60S ribosomal protein L34 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.654 15.824 2 0.0036607 15482 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 95.605 69.191 205700000 0 0 0 7977400 8242700 7162900 8684600 8211900 8756400 12403000 22198000 43052000 27600000 24705000 26712000 32983 1562 30137 276950;276951;276952;276953;276954;276955;276956;276957;276958;276959;276960;276961 219439;219440;219441;219442;219443;219444 219443 6 LSYPTFFPR Unmodified 1126.5811 0.58113065 2411 Q14527 HLTF Helicase-like transcription factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.126 82.187 2 0.0046541 95616 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 119.29 76.692 466220000 0 0 0 14512000 17224000 39859000 29047000 35766000 34786000 52426000 40017000 58039000 27350000 40775000 76416000 32984 2411 30138 276962;276963;276964;276965;276966;276967;276968;276969;276970;276971;276972;276973 219445;219446;219447;219448;219449;219450;219451;219452;219453;219454;219455;219456;219457;219458;219459 219458 15 LSYTEAEGER Unmodified 1153.5251 0.52513192 457 O75128 COBL Protein cordon-bleu yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 30.965 31.003 2 0.021365 34014 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 54.982 30.827 20215000 0 0 0 0 2458500 3871500 0 0 3337000 6276900 0 0 0 4270800 0 32985 457 30139 276974;276975;276976;276977;276978 219460 219460 1 LSYTQLLR Unmodified 992.56548 0.56548059 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 72.7 72.618 2 0.033366 83587 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 53.754 20.112 21463000 0 0 0 2234500 2745500 4240000 2803000 0 0 0 4694200 0 4745500 0 0 32986 2501 30140 276979;276980;276981;276982;276983;276984 219461 219461 1 LTAAVLLAK Unmodified 898.58515 0.5851534 2943 Q6PCE3 PGM2L1 Glucose 1,6-bisphosphate synthase yes yes 0 0 0 By MS/MS 2 0 1 1 76.031 67.9 2 0.018209 89518 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.923 36.62 23234000 23234000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32987 2943 30141 276985 219462 219462 1 LTADDEAFLSANAGAILSQFEK Unmodified 2310.138 0.13795663 3605 Q8WZA0 LZIC Protein LZIC yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 1 3 2 99.212 93.985 2;3 1.8891E-26 117124 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.8 74.384 97674000 14819000 82855000 0 0 0 0 0 0 0 0 0 0 0 0 0 32988 3605 30142 276986;276987;276988;276989;276990;276991 219463;219464;219465;219466;219467;219468 219463 6 LTADMISHPLGDFR Oxidation (M) 1587.7715 0.77152697 2039 Q00587 CDC42EP1 Cdc42 effector protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 2 69.443 69.471 3 0.0011878 80894 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 46.3 32.337 43025000 0 0 0 2934700 2119800 0 0 0 0 5483900 6933800 9253200 7413600 8886200 0 32989 2039 30143 276992;276993;276994;276995;276996;276997;276998;276999 219469;219470;219471 219469 3294 2 LTADMISHPLGDFR Unmodified 1571.7766 0.77661235 2039 Q00587 CDC42EP1 Cdc42 effector protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 77.038 77.182 3 0.04873 88645 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.751 28.133 32418000 0 0 0 0 0 2954400 0 2241300 2115700 3482700 2971400 0 2082700 2291600 14278000 32990 2039 30143 277000;277001;277002;277003;277004;277005;277006;277007 219472 219472 0 LTADPDSEIATTSLR Unmodified 1588.7944 0.79443049 558;559 O75925;O75928 PIAS1;PIAS2 E3 SUMO-protein ligase PIAS1;E3 SUMO-protein ligase PIAS2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.556 62.652 2 5.0932E-20 71792 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 137.16 130.3 308920000 0 0 0 16395000 17367000 22762000 21808000 30748000 13664000 29884000 32344000 35079000 28942000 26152000 33771000 32991 558;559 30144 277008;277009;277010;277011;277012;277013;277014;277015;277016;277017;277018;277019 219473;219474;219475;219476;219477;219478;219479;219480;219481;219482;219483;219484 219481 12 LTADPDSEVATTSLR Unmodified 1574.7788 0.77878042 5297 Q9Y6X2 PIAS3 E3 SUMO-protein ligase PIAS3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.026 55.216 2 1.2765E-18 62494 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 105.17 84.867 66002000 0 0 0 4074800 0 4764000 6249400 6501600 4182600 5508700 7118600 6535400 6274200 7765800 7026400 32992 5297 30145 277020;277021;277022;277023;277024;277025;277026;277027;277028;277029;277030;277031 219485;219486;219487;219488;219489;219490;219491;219492;219493;219494;219495;219496 219486 12 LTAEDLFEAR Unmodified 1163.5823 0.58225287 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 76.694 76.705 2 0.0028772 88487 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 92.838 48.489 46182000 0 0 0 4029400 3911000 4479200 3903300 4425800 3034900 0 0 10563000 6215500 5620700 0 32993 2501 30146 277032;277033;277034;277035;277036;277037;277038;277039;277040 219497;219498;219499;219500;219501;219502 219501 6 LTAEELLNK Unmodified 1029.5706 0.57062555 2651 Q2M2I8 AAK1 AP2-associated protein kinase 1 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 67.208 61.293 2 1.1691E-06 78577 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 170.3 114.21 206110000 0 206110000 0 0 0 0 0 0 0 0 0 0 0 0 0 32994 2651 30147 277041;277042 219503;219504;219505 219503 3 LTAEEMDER Unmodified 1092.4757 0.47573888 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.971 27.168 2 1.2229E-28 28517 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 182.39 161.09 697730000 0 0 0 67306000 57084000 85088000 49978000 39086000 34655000 60103000 68149000 65890000 42005000 52706000 75679000 32995 1518 30148 277043;277044;277045;277046;277047;277048;277049;277050;277051;277052;277053;277054 219506;219507;219508;219509;219510;219511;219512;219513;219514;219515;219516 219514 11 LTAEEMDER Oxidation (M) 1108.4707 0.47065351 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 11.998 12.147 2 0.0025495 9967 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 100.02 85.86 331080000 0 0 0 38289000 23718000 41002000 31520000 13110000 22298000 28976000 20137000 25794000 25855000 20499000 39877000 32996 1518 30148 277055;277056;277057;277058;277059;277060;277061;277062;277063;277064;277065;277066 219517;219518;219519;219520;219521;219522;219523;219524;219525;219526;219527;219528 219523 2404 10 LTAEEMDERR Unmodified 1248.5768 0.57684991 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.039 22.247 3 0.015983 23515 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 37.696 16.856 178510000 0 0 0 15500000 9927600 20844000 16510000 9328200 11688000 17382000 15313000 14721000 15510000 14097000 17694000 32997 1518 30149 277067;277068;277069;277070;277071;277072;277073;277074;277075;277076;277077;277078 219529;219530;219531;219532;219533 219533 3 LTAEEMDERRR Oxidation (M) 1420.6729 0.67287556 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 1 2 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 7.0905 7.2132 3 0.013361 5217 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 55.314 27.301 148830000 0 0 0 14078000 9619700 15157000 9558600 10353000 13271000 13721000 25432000 0 13573000 10316000 13747000 32998 1518 30150 277079;277080;277081;277082;277083;277084;277085;277086;277087;277088;277089 219534;219535;219536 219536 2404 3 LTAEEMDERRR Unmodified 1404.678 0.67796094 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 17.649 17.837 3 0.022119 16559 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.401 18.419 120730000 0 0 0 13703000 7198500 11768000 6341800 9820400 7806700 8364100 6562800 17524000 9157300 7304900 15178000 32999 1518 30150 277090;277091;277092;277093;277094;277095;277096;277097;277098;277099;277100;277101 219537;219538;219539;219540;219541 219539 3 LTAEFEEAQTSACRLQEELEK Unmodified 2481.1693 0.16933311 4817 Q9P2E9 RRBP1 Ribosome-binding protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 87.38 79.249 3 0.005276 103282 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 34.689 26.329 6584000 6584000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33000 4817 30151 277102 219542 219542 1 LTAELIEQAAQYTNAVR Unmodified 1889.9847 0.98469087 892 P09661 SNRPA1 U2 small nuclear ribonucleoprotein A' yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 2 2 2 1 2 87.383 87.521 2;3 5.1403E-36 101222 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 126.34 112.44 33690000 0 0 0 0 0 0 0 0 0 6869000 4017400 7977800 0 3284900 11541000 33001 892 30152 277103;277104;277105;277106;277107;277108;277109;277110;277111 219543;219544;219545;219546;219547;219548;219549;219550;219551 219545 9 LTAEMPDQFEIAETVSRTDSPSK Unmodified 2551.2112 0.21119793 616 O95049 TJP3 Tight junction protein ZO-3 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 85.187 81.182 3 0.0031258 100671 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 35.553 25.573 32470000 0 32470000 0 0 0 0 0 0 0 0 0 0 0 0 0 33002 616 30153 277112;277113 219552 219552 1 LTAEQALQHPFFER Unmodified 1685.8526 0.85255449 1025 P15735 PHKG2 Phosphorylase b kinase gamma catalytic chain, liver/testis isoform yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 77.046 77.18 3 0.0027546 88636 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.092 25.4 14423000 0 0 0 0 0 2278100 0 0 0 0 0 0 0 3020300 9124100 33003 1025 30154 277114;277115;277116 219553 219553 1 LTAEQRK Unmodified 844.47667 0.47666558 323 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 yes yes 0 0 1 By MS/MS 2 0 1 1 2.0918 -1.2028 2 0.039451 2144 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 143.37 59.009 31707000 31707000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33004 323 30155 277117 219554 219554 0 LTAERVEELK Unmodified 1186.6558 0.65575216 4326 Q9H0E9 BRD8 Bromodomain-containing protein 8 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 37.362 36.282 2;3 0.02717 46001 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 89.08 39.039 55320000 0 0 16009000 12244000 12333000 0 0 14735000 0 0 0 0 0 0 0 33005 4326 30156 277118;277119;277120;277121 219555;219556 219556 1 LTAEVENAK Unmodified 973.50803 0.50802529 81 CON__Q6NT21;CON__P78385;P78385;A6NCN2 KRT83;KRT87P Keratin, type II cuticular Hb3;Putative keratin-87 protein no no 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By matching By MS/MS 10 0 13 1 1 1 2 1 1 1 1 1 1 1 1 20.7 20.904 2 0.0034957 21350 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 107.29 60.228 + 205440000 0 0 0 3907200 5595800 5872400 6191800 98337000 5280200 7939200 13007000 13440000 12314000 10020000 23535000 33006 81 30157 277122;277123;277124;277125;277126;277127;277128;277129;277130;277131;277132;277133;277134 219557;219558;219559 219559 3 LTAFEDLATK Unmodified 1107.5812 0.58119023 5338 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 2 2 1 65.707 65.269 2 0.0095404 74466 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 57.59 15.794 + 1982900000 0 1740500000 0 0 11595000 0 0 0 0 22613000 30291000 77150000 0 47976000 52835000 33007 5338 30158 277135;277136;277137;277138;277139;277140;277141;277142;277143 219560;219561;219562;219563;219564;219565;219566;219567;219568 219563 7 LTAFGGFLK Unmodified 952.5382 0.53820321 1187 P25391 LAMA1 Laminin subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 79.781 79.909 2 0.033715 92652 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 46.813 8.0213 10706000 0 0 0 0 0 0 0 0 5103600 0 0 0 5602000 0 0 33008 1187 30159 277144;277145 219569 219569 1 LTAFVNTLNGK Unmodified 1176.6503 0.65027285 1752 P55036;A2A3N6 PSMD4;PIPSL 26S proteasome non-ATPase regulatory subunit 4;Putative PIP5K1A and PSMD4-like protein yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64.336 63.303 2 1.7304E-08 84580 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 185.81 132.06 740700000 252580000 13679000 10219000 27613000 41920000 38208000 18494000 14144000 11884000 75608000 87289000 83226000 11512000 18961000 35354000 33009 1752 30160 277146;277147;277148;277149;277150;277151;277152;277153;277154;277155;277156;277157;277158;277159;277160 219570;219571;219572;219573;219574;219575;219576;219577;219578;219579;219580;219581;219582;219583;219584;219585 219576 13 LTAGEACAQGLVTEVFPDSTFQK Unmodified 2468.1893 0.18934027 511 O75521 ECI2 Enoyl-CoA delta isomerase 2, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 92.806 87.895 3 9.243E-05 109174 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 61.903 55.254 28886000 0 28886000 0 0 0 0 0 0 0 0 0 0 0 0 0 33010 511 30161 277161 219586 219586 1 LTAGLKPGQDANLTQK Unmodified 1653.905 0.90498399 3079 Q7Z392 TRAPPC11 Trafficking protein particle complex subunit 11 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 47.466 41.645 3 0.014892 57670 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 34.045 15.633 23770000 21472000 0 2298500 0 0 0 0 0 0 0 0 0 0 0 0 33011 3079 30162 277162;277163 219587 219587 0 LTALADLEDWEELEK Unmodified 1773.8673 0.86726108 4359 Q9H269 VPS16 Vacuolar protein sorting-associated protein 16 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 96.934 88.804 2 1.0055E-30 114689 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 157.03 133.04 28929000 28929000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33012 4359 30163 277164 219588 219588 1 LTALAEDRPLFDGPSRPSVAR Unmodified 2267.2022 0.20222864 602 O94913 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 69.026 69.306 4 5.5852E-12 78936 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.203 47.487 19740000 0 0 0 0 0 0 0 2111200 3563100 0 0 0 0 0 14066000 33013 602 30164 277165;277166;277167 219589;219590;219591;219592 219590 4 LTALDYHNPAGFNCK Unmodified 1719.8039 0.80388973 5076 Q9Y224 C14orf166 UPF0568 protein C14orf166 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.43 3.14 5 1 24 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 61.969 60.895 2;3 1.3315E-30 68755 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 145.91 136.48 1400700000 687340000 47503000 164830000 22988000 32169000 34908000 32088000 39862000 27160000 43638000 47450000 51184000 39064000 41113000 89441000 33014 5076 30165 277168;277169;277170;277171;277172;277173;277174;277175;277176;277177;277178;277179;277180;277181;277182;277183;277184;277185;277186;277187;277188;277189;277190;277191;277192;277193;277194;277195;277196;277197 219593;219594;219595;219596;219597;219598;219599;219600;219601;219602;219603;219604;219605;219606;219607;219608;219609;219610;219611;219612;219613;219614;219615;219616;219617;219618 219599 25 LTAQFVAR Unmodified 904.51305 0.51305109 2539 Q15459 SF3A1 Splicing factor 3A subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.423 43.598 2 0.0048933 48818 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 114.19 46.152 441720000 0 0 0 22317000 21487000 23836000 29159000 33819000 20719000 32384000 54292000 86145000 34854000 36164000 46541000 33015 2539 30166 277198;277199;277200;277201;277202;277203;277204;277205;277206;277207;277208;277209 219619;219620;219621;219622;219623;219624;219625;219626;219627;219628;219629;219630;219631;219632 219621 14 LTAQNRQLEDELQDLAAK Unmodified 2055.0596 0.059646729 5247 Q9Y5S2 CDC42BPB Serine/threonine-protein kinase MRCK beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 82.668 77.542 3 2.3004E-14 97979 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.608 85.519 63384000 7731000 49425000 6227800 0 0 0 0 0 0 0 0 0 0 0 0 33016 5247 30167 277210;277211;277212 219633;219634;219635 219633 3 LTASSTPPTLDRK Unmodified 1385.7514 0.75144346 4290 Q9C0E2 XPO4 Exportin-4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 5 2 2 1 38.41 33.097 2;3 0.0005929 45764 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.034 59.719 130000000 42545000 67346000 20105000 0 0 0 0 0 0 0 0 0 0 0 0 33017 4290 30168 277213;277214;277215;277216;277217 219636;219637;219638;219639 219639 3 LTATPTPLGGMTGFHMQTEDR 2 Oxidation (M) 2292.0515 0.051466583 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 57.765 58.027 3 3.7263E-16 66021 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 89.483 80.2 382750000 0 0 0 0 0 45500000 49150000 29733000 38133000 43029000 55089000 68029000 0 5578500 48511000 33018 516 30169 277218;277219;277220;277221;277222;277223;277224;277225;277226 219640;219641;219642;219643;219644;219645 219643 669;670 6 LTATPTPLGGMTGFHMQTEDR Oxidation (M) 2276.0566 0.056551961 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 2 1 2 1 1 1 1 2 2 1 2 70.156 70.269 3 3.3786E-62 79389 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 134.07 125.92 314170000 0 0 0 13283000 0 17760000 19076000 14325000 12897000 22591000 28698000 49290000 31586000 28083000 76580000 33019 516 30169 277227;277228;277229;277230;277231;277232;277233;277234;277235;277236;277237;277238;277239;277240;277241;277242 219646;219647;219648;219649;219650;219651;219652;219653;219654;219655;219656;219657;219658;219659;219660;219661;219662 219651 669;670 17 LTATPTPLGGMTGFHMQTEDR Unmodified 2260.0616 0.061637339 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 78.975 78.392 3 7.0083E-67 90367 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 147.9 142.44 230320000 10045000 0 0 0 4782500 11753000 3787200 18856000 9530700 19889000 19329000 20761000 11705000 22489000 77389000 33020 516 30169 277243;277244;277245;277246;277247;277248;277249;277250;277251;277252;277253;277254 219663;219664;219665;219666;219667;219668;219669;219670;219671;219672;219673;219674;219675;219676;219677 219667 15 LTATQSTAPK Unmodified 1016.5502 0.55022446 3593 Q8WXI7 MUC16 Mucin-16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching 10 0 11 1 1 1 1 1 2 1 1 1 1 24.336 24.588 2 0.02375 25562 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 45.335 0.61412 80772000 0 0 0 21392000 4489100 0 4117000 8877600 0 5754900 7655700 5260800 17232000 3285000 2707300 33021 3593 30170 277255;277256;277257;277258;277259;277260;277261;277262;277263;277264;277265 219678;219679 219679 2 LTATTQK Unmodified 761.42832 0.42831841 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS 2.67 0.471 1 2 1 2 6.7929 3.3708 2 0.013428 5430 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.54 62.933 596010000 1962900 594040000 0 0 0 0 0 0 0 0 0 0 0 0 0 33022 965 30171 277266;277267;277268 219680 219680 1 LTAVEGSMK Oxidation (M) 950.47428 0.47428232 2927 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 2 1 1 13.782 13.966 2 0.0044342 13493 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 74.301 22.514 21757000 0 0 0 2333700 0 3002000 3122900 0 0 0 5756900 0 3821900 3719300 0 33023 2927 30172 277269;277270;277271;277272;277273;277274;277275 219681;219682;219683;219684;219685;219686 219685 4548 6 LTAYEFAK Unmodified 941.48583 0.48583328 3401 Q8NBQ5 HSD17B11 Estradiol 17-beta-dehydrogenase 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 49.925 50.088 2 0.016961 56473 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 66.429 43.5 394150000 0 0 0 21235000 33221000 0 33912000 32625000 23775000 35721000 45391000 49839000 31430000 42655000 44349000 33024 3401 30173 277276;277277;277278;277279;277280;277281;277282;277283;277284;277285;277286 219687;219688;219689;219690;219691;219692;219693 219690 7 LTCEEEEEK Unmodified 1165.4809 0.48088384 1656;1655 P51532;P51531 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 10.185 10.325 2 0.0034774 8368 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 106.91 75.682 51680000 0 0 0 3751100 3168800 3480800 5096300 2282500 1714100 3197200 4815900 7589300 4433200 3781400 8368800 33025 1656;1655 30174 277287;277288;277289;277290;277291;277292;277293;277294;277295;277296;277297;277298 219694;219695;219696;219697;219698;219699;219700;219701;219702;219703;219704 219697 11 LTCFELAPK Unmodified 1077.5529 0.55286699 2627 Q16666 IFI16 Gamma-interferon-inducible protein 16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 63.285 62.615 2 0.0089221 71074 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 68.224 53.442 175660000 0 95045000 0 3863600 4941600 5398000 4742600 5004300 3673300 7051400 7250900 8174400 8112300 7867600 14532000 33026 2627 30175 277299;277300;277301;277302;277303;277304;277305;277306;277307;277308;277309;277310;277311;277312 219705;219706;219707;219708;219709;219710;219711;219712;219713;219714 219712 10 LTCLQNLK Unmodified 988.53755 0.53755128 859 P08174 CD55 Complement decay-accelerating factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8 3.46 3 9 1 1 1 1 1 1 1 1 1 1 1 1 44.554 43.293 2 0.0030636 59342 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 127.31 84.472 273040000 53485000 112470000 958310 0 7119400 7965500 6918100 0 7922600 0 12333000 23630000 14840000 15067000 10334000 33027 859 30176 277313;277314;277315;277316;277317;277318;277319;277320;277321;277322;277323;277324 219715;219716;219717;219718;219719;219720;219721;219722;219723;219724;219725 219722 11 LTDAQILTR Unmodified 1029.5819 0.58185893 1348 P35250 RFC2 Replication factor C subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.314 48.476 2 4.3867E-09 54404 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 163.15 83.7 1224800000 0 0 0 84276000 74473000 92153000 84815000 97762000 73433000 111100000 106460000 144110000 132690000 89317000 134180000 33028 1348 30177 277325;277326;277327;277328;277329;277330;277331;277332;277333;277334;277335;277336 219726;219727;219728;219729;219730;219731;219732;219733;219734;219735;219736;219737 219727 11 LTDCVVMRDPASK Unmodified 1490.7221 0.72213394 1141 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 44.126 42.866 3 8.161E-07 47606 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 92.295 71.632 2133800000 79068000 480050000 109030000 50644000 28820000 56850000 48845000 38045000 52585000 63514000 292510000 209480000 92743000 131980000 399600000 33029 1141 30178 277337;277338;277339;277340;277341;277342;277343;277344;277345;277346;277347;277348;277349;277350;277351;277352 219738;219739;219740;219741;219742;219743;219744;219745;219746;219747;219748;219749;219750;219751;219752;219753;219754;219755;219756;219757 219748 19 LTDCVVMRDPASK Oxidation (M) 1506.717 0.71704856 1141 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching 8.28 3.23 3 1 14 1 2 1 1 2 2 1 2 2 2 1 1 30.353 29.533 2;3 1.4355E-08 31542 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 116.74 88.965 966410000 61819000 434370000 83727000 0 1270100 0 36679000 0 35236000 4658500 104020000 115750000 59417000 8710000 20751000 33030 1141 30178 277353;277354;277355;277356;277357;277358;277359;277360;277361;277362;277363;277364;277365;277366;277367;277368;277369;277370 219758;219759;219760;219761;219762;219763;219764;219765 219765 1640 6 LTDEDFSPFGSGGGLFSGGK Unmodified 1973.9007 0.90068647 2840;5195 Q641Q2;Q9Y4E1 FAM21A;FAM21C WASH complex subunit FAM21A;WASH complex subunit FAM21C no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.64 2.9 1 1 9 2 1 1 1 1 1 1 1 1 1 88.447 87.828 2 4.3962E-107 108585 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 185.27 162.74 96018000 0 70681000 0 0 0 1950800 971970 1799300 1214300 3435200 3020100 2546500 0 1962200 8436200 33031 2840;5195 30179 277371;277372;277373;277374;277375;277376;277377;277378;277379;277380;277381 219766;219767;219768;219769;219770;219771;219772;219773;219774;219775;219776 219769 11 LTDELAPPKPPLPEGEVPPPRPPPPEEK Unmodified 3022.6015 0.60153833 1073 P18206 VCL Vinculin yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 2 1 1 1 1 1 1 1 1 2 75.829 75.986 3;4 1.5614E-36 87254 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.397 84.99 345410000 0 0 0 0 0 57320000 13957000 7207800 24630000 27365000 31549000 37077000 11169000 32949000 102190000 33032 1073 30180 277382;277383;277384;277385;277386;277387;277388;277389;277390;277391;277392;277393 219777;219778;219779;219780;219781;219782;219783;219784;219785;219786;219787;219788;219789;219790;219791;219792 219782 15 LTDEQGEGSQPFEGLEK Unmodified 1862.8534 0.85340193 3767 Q96BY7 ATG2B Autophagy-related protein 2 homolog B yes yes 0 0 0 By MS/MS 2 0 1 1 64.305 58.397 2 4.4465E-35 74899 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.34 111.53 10348000 0 10348000 0 0 0 0 0 0 0 0 0 0 0 0 0 33033 3767 30181 277394 219793 219793 1 LTDEQVALVR Unmodified 1142.6295 0.62953741 2372 Q14137 BOP1 Ribosome biogenesis protein BOP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 51.654 51.825 2 0.010131 58714 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 67.897 46.609 36884000 0 0 0 0 5360000 5436100 0 0 0 5130300 5511700 0 0 5903000 9543400 33034 2372 30182 277395;277396;277397;277398;277399;277400 219794;219795 219794 2 LTDFGFCAQITPEQSK Unmodified 1840.8665 0.86654957 2248 Q13177;O75914 PAK2;PAK3 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34;Serine/threonine-protein kinase PAK 3 no no 0 0 0 By MS/MS By MS/MS By MS/MS 2.22 0.416 7 2 4 4 1 83.48 78.138 2;3 8.6635E-62 97409 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 185.51 172.53 392880000 31870000 354100000 6912100 0 0 0 0 0 0 0 0 0 0 0 0 33035 2248 30183 277401;277402;277403;277404;277405;277406;277407;277408;277409 219796;219797;219798;219799;219800 219796 4 LTDFGLCK Unmodified 952.4688 0.46880301 1158;4854 Q9UBS0;P23443 RPS6KB2;RPS6KB1 Ribosomal protein S6 kinase beta-2;Ribosomal protein S6 kinase beta-1 no no 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 56.166 51.307 2 0.002447 66673 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.59 0 230940000 0 224010000 6938100 0 0 0 0 0 0 0 0 0 0 0 0 33036 4854;1158 30184 277410;277411 219801;219802 219802 2 LTDFGLSK Unmodified 879.47018 0.47018322 2531;1672;3859;2913 Q96GX5;O60307;O15021;Q15418;P51812;Q9UK32;Q6P0Q8 MASTL;MAST3;MAST4;RPS6KA1;RPS6KA3;RPS6KA6;MAST2 Serine/threonine-protein kinase greatwall;Microtubule-associated serine/threonine-protein kinase 3;Microtubule-associated serine/threonine-protein kinase 4;Ribosomal protein S6 kinase alpha-1;Ribosomal protein S6 kinase alpha-3;Ribosomal protein S6 kinase alpha-6;Microtubule-associated serine/threonine-protein kinase 2 no no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 52.252 50.941 2 0.0078116 57696 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 88.358 0 2106900000 45218000 1319600000 40754000 40507000 37295000 81209000 53459000 43240000 39154000 58440000 82333000 74072000 46026000 56751000 88806000 33037 3859;2531;1672;2913 30185 277412;277413;277414;277415;277416;277417;277418;277419;277420;277421;277422;277423;277424;277425;277426;277427 219803;219804;219805;219806;219807;219808;219809;219810;219811;219812;219813;219814;219815;219816 219814 14 LTDFLPK Unmodified 832.46945 0.46945494 4905 Q9UHP3 USP25 Ubiquitin carboxyl-terminal hydrolase 25 yes yes 0 0 0 By matching By MS/MS By MS/MS 2 0 3 1 1 1 67.873 61.893 2 0.029674 79678 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.407 30.844 77612000 2412100 71874000 3325000 0 0 0 0 0 0 0 0 0 0 0 0 33038 4905 30186 277428;277429;277430 219817 219817 1 LTDHGLEEISSCRQK Unmodified 1771.8523 0.85229649 676 O95630 STAMBP STAM-binding protein yes yes 0 0 1 By MS/MS 2 0 1 1 44.479 37.614 3 0.00024664 51705 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 91.076 67.938 14367000 14367000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33039 676 30187 277431 219818 219818 1 LTDIHGNVLQYHK Unmodified 1536.8049 0.80487601 701 O95861 BPNT1 3'(2'),5'-bisphosphate nucleotidase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.14 2.8 6 1 2 2 2 1 51.213 46.229 3;4 5.9197E-07 57918 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 102.87 83.478 686930000 453120000 135620000 84018000 0 0 0 0 0 0 0 0 0 0 0 14169000 33040 701 30188 277432;277433;277434;277435;277436;277437;277438 219819;219820;219821;219822;219823;219824 219824 4 LTDIINNDHENVK Unmodified 1523.758 0.7579854 3318 Q8N335 GPD1L Glycerol-3-phosphate dehydrogenase 1-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 6.56 3.86 3 1 5 1 2 1 1 1 1 1 1 42.303 40.086 3 7.9489E-10 49970 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 113.24 105.14 180020000 7039800 137650000 7736500 0 0 0 0 2753700 0 2620900 5342700 0 0 3963800 12909000 33041 3318 30189 277439;277440;277441;277442;277443;277444;277445;277446;277447 219825;219826;219827;219828;219829;219830;219831 219829 6 LTDIRPIPDK Unmodified 1166.6659 0.66592292 3892 Q96JG6 CCDC132 Coiled-coil domain-containing protein 132 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.83 3.67 3 1 2 1 2 1 1 1 45.39 41.756 3 0.020769 52669 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 45.077 20.224 173280000 7494300 81843000 29450000 0 9242500 0 0 0 0 0 0 45251000 0 0 0 33042 3892 30190 277448;277449;277450;277451;277452;277453 219832;219833;219834;219835;219836 219834 4 LTDISVTDPEK Unmodified 1216.6187 0.61869795 5137 Q9Y333 LSM2 U6 snRNA-associated Sm-like protein LSm2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.65 3.66 1 3 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 49.285 47.991 2 5.8907E-11 60757 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 152.97 98.424 1249600000 42663000 784490000 3005400 26087000 19858000 24944000 21555000 27466000 15530000 29106000 36880000 38603000 37159000 44368000 97899000 33043 5137 30191 277454;277455;277456;277457;277458;277459;277460;277461;277462;277463;277464;277465;277466;277467;277468;277469;277470 219837;219838;219839;219840;219841;219842;219843;219844;219845;219846;219847;219848;219849;219850;219851;219852;219853;219854;219855 219841 13 LTDNGTEFSVK Unmodified 1209.5877 0.58773217 1695 P52732 KIF11 Kinesin-like protein KIF11 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.45 1 6 1 1 1 1 1 1 1 44.266 43.383 2 0.0022382 48189 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 68.626 40.802 89173000 0 4760800 0 0 8413100 32242000 0 0 0 17762000 0 25996000 0 0 0 33044 1695 30192 277471;277472;277473;277474;277475;277476;277477 219856;219857;219858;219859 219859 4 LTDNLVALK Unmodified 985.5808 0.5807963 2037 Q00536 CDK16 Cyclin-dependent kinase 16 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 66.295 60.974 2 0.0026386 78311 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.04 53.556 87133000 0 87133000 0 0 0 0 0 0 0 0 0 0 0 0 0 33045 2037 30193 277478;277479 219860;219861;219862 219861 3 LTDPIPTTETSIAPR Unmodified 1610.8516 0.85155143 2651 Q2M2I8 AAK1 AP2-associated protein kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.955 72.024 2 0.0037041 82946 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 59.198 45.429 70304000 0 0 0 3999600 5177900 5863900 4671200 5749400 3886500 5694600 6748800 8428800 5463200 5221700 9398400 33046 2651 30194 277480;277481;277482;277483;277484;277485;277486;277487;277488;277489;277490;277491 219863;219864;219865;219866;219867;219868;219869;219870 219863 6 LTDPSLLYLEVSTLVSK Unmodified 1877.0397 0.039746135 419 O60645 EXOC3 Exocyst complex component 3 yes yes 0 0 0 By MS/MS 2 0 1 1 101.51 96.796 3 0.006742 119649 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 38.417 36.232 6014200 0 6014200 0 0 0 0 0 0 0 0 0 0 0 0 0 33047 419 30195 277492 219871 219871 1 LTDQVMQNPR Unmodified 1200.5921 0.59210605 4057 Q99733 NAP1L4 Nucleosome assembly protein 1-like 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.417 33.601 2 0.00051173 36907 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 160.63 121.67 347920000 0 0 0 14496000 13524000 14248000 15179000 19736000 10761000 23168000 52838000 49460000 20999000 36385000 77123000 33048 4057 30196 277493;277494;277495;277496;277497;277498;277499;277500;277501;277502;277503;277504 219872;219873;219874;219875;219876;219877;219878;219879;219880;219881;219882;219883 219878 12 LTDQVMQNPR Oxidation (M) 1216.587 0.58702067 4057 Q99733 NAP1L4 Nucleosome assembly protein 1-like 4 yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 19.465 19.932 2 0.00042665 19353 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 122.19 99.447 39078000 0 0 0 0 0 0 0 0 0 0 0 0 0 15225000 23852000 33049 4057 30196 277505;277506 219884;219885 219885 5556 2 LTDRDIIVLQR Unmodified 1340.7776 0.77759863 5133 Q9Y314 NOSIP Nitric oxide synthase-interacting protein yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.779 62.874 3 0.0001905 71694 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 79.82 42.395 229980000 0 0 0 7594300 7903600 22399000 17245000 14783000 16975000 21796000 20635000 32990000 17249000 16899000 33514000 33050 5133 30197 277507;277508;277509;277510;277511;277512;277513;277514;277515;277516;277517;277518 219886;219887;219888;219889;219890;219891;219892;219893;219894;219895;219896 219886 11 LTDSVLR Unmodified 802.45487 0.45486751 2984 Q6UXN9 WDR82 WD repeat-containing protein 82 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.326 33.51 2 0.02407 36801 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 100.07 17.804 618120000 0 0 0 28573000 27185000 30486000 40466000 39745000 30378000 50407000 75259000 84910000 66098000 56927000 87681000 33051 2984 30198 277519;277520;277521;277522;277523;277524;277525;277526;277527;277528;277529;277530 219897;219898 219898 2 LTDTLVSK Unmodified 875.4964 0.49639797 3151 Q86UP2 KTN1 Kinectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 32.529 31.985 2 0.012189 40951 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.14 29.397 173920000 0 130310000 1139600 3086000 0 3878100 3816700 3245900 0 5407100 4631400 7196600 4721300 0 6493500 33052 3151 30199 277531;277532;277533;277534;277535;277536;277537;277538;277539;277540;277541 219899;219900;219901 219901 3 LTDTSKDEENHEESESLQEDMLGNR Oxidation (M) 2921.2469 0.24686774 3255 Q8IX12 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 13 1 2 1 1 1 2 1 1 1 2 38.044 38.381 4 3.3671E-23 41417 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.593 76.089 180570000 0 0 0 0 0 7915600 25632000 17821000 10509000 15276000 29901000 16445000 12279000 11653000 33141000 33053 3255 30200 277542;277543;277544;277545;277546;277547;277548;277549;277550;277551;277552;277553;277554 219902;219903;219904;219905;219906;219907 219904 4864 6 LTDTSKDEENHEESESLQEDMLGNR Unmodified 2905.252 0.25195312 3255 Q8IX12 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 2 53.159 53.228 3;4 9.5146E-43 59562 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.449 88.016 64021000 0 0 0 4083300 4280700 0 0 7181300 0 0 0 18244000 0 0 30232000 33054 3255 30200 277555;277556;277557;277558;277559;277560 219908;219909;219910 219910 3 LTDTTFLPSSK Unmodified 1208.6289 0.62886871 4420 Q9H6R7 C2orf44 WD repeat and coiled-coil-containing protein C2orf44 yes yes 0 0 0 By MS/MS 2 0 1 1 65.322 59.404 2 0.0018539 76095 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.667 71.816 36701000 0 36701000 0 0 0 0 0 0 0 0 0 0 0 0 0 33055 4420 30201 277561 219911 219911 0 LTDYGMCK Oxidation (M) 1002.4151 0.41505288 1443 P41743;Q05513 PRKCI;PRKCZ Protein kinase C iota type;Protein kinase C zeta type yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 15.447 15.618 2 0.046362 15551 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 42.396 25.841 41207000 0 0 0 1940100 1775600 2341700 3041800 0 2206300 4071500 5119500 6687900 4784200 3922700 5315200 33056 1443 30202 277562;277563;277564;277565;277566;277567;277568;277569;277570;277571;277572 219912 219912 1 LTDYGMCK Unmodified 986.42014 0.42013826 1443 P41743;Q05513 PRKCI;PRKCZ Protein kinase C iota type;Protein kinase C zeta type yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 29.348 28.591 2 0.020877 36298 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.265 20.508 133350000 0 81227000 0 0 5698600 7048600 4291900 0 3583700 5243200 9056600 0 0 6815800 10389000 33057 1443 30202 277573;277574;277575;277576;277577;277578;277579;277580;277581;277582 219913;219914 219914 2 LTEAMGGGWQQEQFEHYK Unmodified 2137.9527 0.95273882 4890 Q9UH65 SWAP70 Switch-associated protein 70 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 72.505 68.247 3 1.6923E-05 86591 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.932 64.113 31581000 0 25520000 6060300 0 0 0 0 0 0 0 0 0 0 0 0 33058 4890 30203 277583;277584 219915;219916 219915 1 LTEDDLILLEK Unmodified 1300.7126 0.71259834 5085 Q9Y263 PLAA Phospholipase A-2-activating protein yes yes 0 0 0 By MS/MS By MS/MS By matching By matching 8 3.46 1 3 1 1 1 1 82.394 81.273 2 0.0005956 100521 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.257 85.661 50459000 0 40858000 0 0 0 3978100 0 0 1197900 4424800 0 0 0 0 0 33059 5085 30204 277585;277586;277587;277588 219917;219918 219918 2 LTEDLEYHELLDR Unmodified 1644.7995 0.79951586 1132 P22059 OSBP Oxysterol-binding protein 1 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 72.276 72.385 3 0.0017118 83328 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 57.434 47.901 36934000 0 0 0 0 2554200 5724500 0 0 0 5686000 4422400 8021900 0 0 10525000 33060 1132 30205 277589;277590;277591;277592;277593;277594 219919;219920 219919 2 LTEDQALSNVHAK Unmodified 1424.726 0.72595699 5337 yes yes 0 0 0 By MS/MS 3 0 1 1 33.231 28.752 3 0.046844 35804 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 21.301 12.916 + 1703900 0 1703900 0 0 0 0 0 0 0 0 0 0 0 0 0 33061 5337 30206 277595 219921 219921 1 LTEENTTLR Unmodified 1075.551 0.55095274 3135 Q86TG7 PEG10 Retrotransposon-derived protein PEG10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.734 24.932 2 0.0011265 25160 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 143.01 102.91 221390000 0 0 0 20555000 13142000 21183000 0 17586000 14203000 0 0 37999000 19341000 19315000 58067000 33062 3135 30207 277596;277597;277598;277599;277600;277601;277602;277603;277604;277605;277606;277607 219922;219923;219924;219925;219926;219927;219928;219929;219930;219931;219932;219933;219934 219925 13 LTEESLTSDAANDNHIVAEGVSEESLNRLK Unmodified 3240.5746 0.57460789 3341 Q8N584 TTC39C Tetratricopeptide repeat protein 39C yes yes 0 0 1 By MS/MS 2 0 1 1 79.193 76.62 4 8.1845E-10 93094 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 49.094 38.946 8035000 0 0 8035000 0 0 0 0 0 0 0 0 0 0 0 0 33063 3341 30208 277608 219935 219935 1 LTEGCSFR Unmodified 968.43857 0.43856552 3032;1460 P42677;Q71UM5 RPS27;RPS27L 40S ribosomal protein S27;40S ribosomal protein S27-like no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 25.911 26.112 2 0.0075386 27916 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 89.296 67.165 154800000 0 0 0 5889100 10140000 8172100 8097400 8949600 7657600 8473100 14994000 30541000 14978000 16958000 19945000 33064 1460;3032 30209 277609;277610;277611;277612;277613;277614;277615;277616;277617;277618;277619;277620 219936;219937;219938;219939;219940;219941;219942;219943;219944;219945 219939 10 LTEHNETILFK Unmodified 1343.7085 0.70851601 659 O95425 SVIL Supervillin yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching 10 0 6 1 1 1 1 1 1 52.054 52.137 3 0.0078754 59312 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 37.968 24.159 28433000 0 0 0 0 3832000 0 5590700 4911100 3255600 0 6701000 0 0 4142200 0 33065 659 30210 277621;277622;277623;277624;277625;277626 219946;219947 219946 2 LTEIINTQHENVK Unmodified 1537.81 0.81002097 1128 P21695 GPD1 Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 46.817 42.128 3 0.0090417 52874 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 56.122 42.986 19877000 0 15122000 4755500 0 0 0 0 0 0 0 0 0 0 0 0 33066 1128 30211 277627;277628 219948;219949 219949 1 LTEISRR Unmodified 873.50321 0.50321468 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 11.439 11.603 2 0.046737 10410 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 124.59 0.25147 62515000 0 0 0 0 6215400 0 0 9180200 9564600 0 0 0 16942000 11782000 8830500 33067 2556 30212 277629;277630;277631;277632;277633;277634 219950 219950 0 LTEIYSDR Unmodified 995.49238 0.49237523 5052 Q9UPN9 TRIM33 E3 ubiquitin-protein ligase TRIM33 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 2 33.577 33.854 2 0.0067232 36576 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 98.457 65.1 154370000 0 0 0 0 11398000 16257000 11050000 11851000 8680700 15352000 17997000 21565000 15570000 0 24649000 33068 5052 30213 277635;277636;277637;277638;277639;277640;277641;277642;277643;277644;277645 219951;219952;219953;219954;219955;219956;219957 219956 1 LTELEQR Unmodified 887.47125 0.47124585 472 O75179 ANKRD17 Ankyrin repeat domain-containing protein 17 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 21.867 22.059 2 0.015603 23071 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 117.62 0 168660000 0 0 0 12404000 7277000 12894000 14967000 14407000 14049000 18308000 17505000 20790000 0 16656000 19400000 33069 472 30214 277646;277647;277648;277649;277650;277651;277652;277653;277654;277655;277656 219958;219959;219960;219961;219962;219963;219964 219959 7 LTELGTVDPK Unmodified 1071.5812 0.58119023 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 44.79 43.859 2 0.00012254 55744 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.12 100.6 1718800000 0 804440000 12228000 87836000 76640000 171330000 64219000 36904000 86238000 110250000 59335000 57807000 85934000 65697000 0 33070 1518 30215 277657;277658;277659;277660;277661;277662;277663;277664;277665;277666;277667;277668;277669;277670 219965;219966;219967;219968;219969;219970;219971;219972;219973;219974;219975;219976;219977;219978;219979;219980;219981;219982;219983;219984;219985;219986;219987;219988 219971 23 LTELQLR Unmodified 871.51272 0.51271674 3125 Q7Z7H5 TMED4 Transmembrane emp24 domain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 49.016 49.174 2 0.050025 54465 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 63.148 6.0452 487360000 0 0 0 23081000 16370000 16723000 21693000 23424000 0 34802000 60317000 83577000 67193000 49498000 90682000 33071 3125 30216 277671;277672;277673;277674;277675;277676;277677;277678;277679;277680;277681 219989 219989 1 LTELYNAYVETQDQLLLEK Unmodified 2282.1682 0.16819413 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.5 0.5 2 2 2 1 1 92.735 88.398 3 1.6665E-87 111398 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 135.09 126.44 48078000 40748000 2755600 4573700 0 0 0 0 0 0 0 0 0 0 0 0 33072 965 30217 277682;277683;277684;277685 219990;219991;219992;219993;219994 219992 5 LTEMETLQSQLMAEK 2 Oxidation (M) 1782.838 0.83795156 1356 P35579 MYH9 Myosin-9 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 27 2 3 3 2 3 2 2 2 2 2 2 2 58.606 58.694 2;3 2.3067E-149 67012 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 217.22 200.61 597220000 0 0 0 29469000 68177000 66542000 45520000 33301000 39226000 54431000 61565000 73081000 57434000 33961000 34511000 33073 1356 30218 277686;277687;277688;277689;277690;277691;277692;277693;277694;277695;277696;277697;277698;277699;277700;277701;277702;277703;277704;277705;277706;277707;277708;277709;277710;277711;277712 219995;219996;219997;219998;219999;220000;220001;220002;220003;220004;220005;220006;220007;220008;220009;220010;220011;220012;220013;220014;220015;220016;220017;220018;220019;220020;220021;220022;220023;220024;220025;220026;220027;220028 220010 2083;2084 31 LTEMETLQSQLMAEK Oxidation (M) 1766.843 0.84303694 1356 P35579 MYH9 Myosin-9 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 35 2 3 3 3 3 3 3 3 3 3 3 3 70.629 70.723 2 5.3271E-169 85827 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 221.75 199.75 528880000 0 0 0 18064000 33803000 50436000 23187000 33922000 32817000 74671000 55436000 66253000 41747000 37629000 60911000 33074 1356 30218 277713;277714;277715;277716;277717;277718;277719;277720;277721;277722;277723;277724;277725;277726;277727;277728;277729;277730;277731;277732;277733;277734;277735;277736;277737;277738;277739;277740;277741;277742;277743;277744;277745;277746;277747 220029;220030;220031;220032;220033;220034;220035;220036;220037;220038;220039;220040;220041;220042;220043;220044;220045;220046;220047;220048;220049;220050;220051;220052;220053;220054;220055;220056;220057;220058;220059;220060;220061;220062;220063;220064;220065;220066;220067 220040 2083;2084 39 LTEMETLQSQLMAEK Unmodified 1750.8481 0.84812231 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 1 2 2 2 2 2 2 2 2 2 2 2 80.485 80.567 2;3 5.0084E-269 93272 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 299.81 242.03 313230000 0 0 0 2644300 14584000 21317000 6117600 28742000 13167000 48678000 28834000 31620000 10503000 20735000 86289000 33075 1356 30218 277748;277749;277750;277751;277752;277753;277754;277755;277756;277757;277758;277759;277760;277761;277762;277763;277764;277765;277766;277767;277768;277769;277770 220068;220069;220070;220071;220072;220073;220074;220075;220076;220077;220078;220079;220080;220081;220082 220080 14 LTENLVALK Unmodified 999.59645 0.59644637 2132 Q07002 CDK18 Cyclin-dependent kinase 18 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 62.381 61.708 2 0.0030483 70480 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 91.318 26.066 269580000 0 49596000 0 14010000 13680000 12453000 15677000 17544000 13007000 21448000 28019000 23548000 19934000 15970000 24696000 33076 2132 30219 277771;277772;277773;277774;277775;277776;277777;277778;277779;277780;277781;277782;277783;277784 220083;220084;220085;220086;220087;220088;220089;220090;220091;220092;220093;220094;220095 220083 13 LTEPASVPIHK Unmodified 1190.6659 0.66592292 2484 Q15042 RAB3GAP1 Rab3 GTPase-activating protein catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7 3.8 4 1 8 1 2 2 1 1 1 1 1 1 1 1 42.922 40.95 2;3 0.00045535 53858 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.548 60.888 799770000 40876000 552400000 52459000 17607000 13821000 27871000 18042000 15483000 15470000 24894000 0 0 20847000 0 0 33077 2484 30220 277785;277786;277787;277788;277789;277790;277791;277792;277793;277794;277795;277796;277797 220096;220097;220098;220099;220100;220101;220102;220103;220104;220105;220106 220099 9 LTEPHQVYVQILQK Unmodified 1694.9356 0.93555583 2282 Q13415 ORC1 Origin recognition complex subunit 1 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 70.077 70.195 3 0.002398 80676 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 47.352 39.512 52028000 0 0 0 1936500 0 5748700 3877200 0 4939400 7002900 4281600 6513900 3508000 4419100 9800800 33078 2282 30221 277798;277799;277800;277801;277802;277803;277804;277805;277806;277807 220107;220108;220109;220110;220111 220108 5 LTEQAVQAINK Unmodified 1213.6667 0.6666512 4107 Q9BRF8 CPPED1 Serine/threonine-protein phosphatase CPPED1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 39.691 40.193 2 0.00028316 43623 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 90.601 66.082 25443000 0 0 0 0 0 0 0 0 0 0 8711600 10410000 0 6321700 0 33079 4107 30222 277808;277809;277810;277811 220112;220113;220114;220115 220114 4 LTEQERSK Unmodified 989.51417 0.5141733 3813 Q96EK5 KIAA1279 KIF1-binding protein yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 1.8948 -1.4223 2 0.032339 1298 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 143.89 67.113 22999000 0 22999000 0 0 0 0 0 0 0 0 0 0 0 0 0 33080 3813 30223 277812;277813 220116;220117 220116 2 LTEQLAGPLR Unmodified 1096.6241 0.6240581 1451 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 54.591 54.721 2 0.0013821 62961 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 107.01 56.304 220050000 0 0 0 15533000 14903000 19872000 21657000 0 10108000 19915000 26251000 19045000 20392000 24584000 27793000 33081 1451 30224 277814;277815;277816;277817;277818;277819;277820;277821;277822;277823;277824;277825 220118;220119;220120;220121;220122;220123;220124;220125;220126;220127;220128;220129;220130;220131;220132 220132 15 LTEQLAGPLRQMQECAK Unmodified 1971.987 0.98701583 1451 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes yes 0 0 1 By MS/MS 2 0 1 1 77.537 69.407 3 0.018116 91397 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 33.697 29.259 10611000 10611000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33082 1451 30225 277826 220133 220133 1 LTEQLDVK Unmodified 944.51786 0.51786169 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 37.359 37.523 2 0.006809 41354 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 95.909 31.152 200480000 0 0 0 10791000 10508000 27047000 0 0 18365000 20944000 0 31567000 25531000 18908000 36818000 33083 2556 30226 277827;277828;277829;277830;277831;277832;277833;277834;277835 220134;220135;220136;220137;220138;220139 220134 3 LTEQLQATEK Unmodified 1159.6085 0.60846762 392 O60293 ZFC3H1 Zinc finger C3H1 domain-containing protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 2 2 1 1 1 1 1 1 1 28.723 29.165 2 0.00114 31499 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 109.44 61.781 57697000 0 0 0 0 0 0 0 0 0 8733200 0 14537000 11674000 9993300 12760000 33084 392 30227 277836;277837;277838;277839;277840;277841;277842;277843;277844;277845;277846 220140;220141;220142;220143;220144;220145;220146;220147;220148;220149;220150 220140 11 LTEQPELANK Unmodified 1141.5979 0.59790293 722 P00374 DHFR Dihydrofolate reductase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31.079 30.28 2 1.1987E-05 37893 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 133.57 72.984 907790000 27381000 748570000 2177200 4337200 3865800 5448600 5008200 4382000 4264200 6254200 15556000 22763000 6772500 10680000 40330000 33085 722 30228 277847;277848;277849;277850;277851;277852;277853;277854;277855;277856;277857;277858;277859;277860;277861 220151;220152;220153;220154;220155;220156;220157;220158;220159;220160;220161;220162;220163 220154 13 LTESNSAMVK Unmodified 1078.5329 0.53285983 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 2 1 21.525 21.714 2 0.0060966 22789 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 66.299 34.364 66009000 0 0 0 0 6383300 8363600 9821800 0 0 11129000 12175000 0 0 1126900 17009000 33086 5262 30229 277862;277863;277864;277865;277866;277867;277868;277869;277870 220164;220165;220166;220167;220168;220169 220164 5 LTESNSAMVK Oxidation (M) 1094.5278 0.52777445 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 1 1 1 1 2 2 1 2 2 12.301 12.523 2 0.0012571 11935 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 96.948 86.961 45310000 0 0 0 2121000 2747600 0 3241500 2581600 2746800 3980600 5881500 8861900 4155500 2290700 6701300 33087 5262 30229 277871;277872;277873;277874;277875;277876;277877;277878;277879;277880;277881;277882;277883;277884;277885 220170;220171;220172;220173;220174;220175 220174 6666 4 LTESPCALVASQYGWSGNMER Oxidation (M) 2371.0573 0.057280243 1002 P14625 HSP90B1 Endoplasmin yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 2 79.215 79.377 2;3 8.626E-29 91780 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 103.39 95.663 112630000 0 0 0 0 0 12241000 0 0 0 0 8199400 12868000 0 10950000 68369000 33088 1002 30230 277886;277887;277888;277889;277890;277891 220176;220177;220178;220179 220178 1361 4 LTESPCALVASQYGWSGNMER Unmodified 2355.0624 0.06236562 1002 P14625 HSP90B1 Endoplasmin yes yes 0 0 0 By MS/MS 10 0 1 1 82.285 82.487 3 0.00082023 95069 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.379 35.281 21845000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21845000 33089 1002 30230 277892 220180 220180 1 LTETQGELK Unmodified 1017.5342 0.53424004 5183 Q9Y448 KNSTRN Small kinetochore-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 21.43 21.301 2 0.0032531 22391 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 90.657 44.641 517660000 0 98555000 0 21547000 24229000 41234000 31705000 25974000 22650000 31463000 43943000 45409000 33624000 36739000 60591000 33090 5183 30231 277893;277894;277895;277896;277897;277898;277899;277900;277901;277902;277903;277904;277905 220181;220182;220183;220184;220185;220186;220187;220188;220189;220190;220191;220192;220193 220193 13 LTETVVTEYLNSGNANEAVNGVR Unmodified 2449.2085 0.20849581 1974 P78344 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 18 1 2 1 1 2 2 2 2 2 1 1 1 81.853 81.925 2;3 5.9791E-280 94923 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 288.53 261.9 696710000 0 0 0 3245300 64814000 21195000 12069000 68781000 56778000 149260000 118140000 127100000 6965200 15677000 52684000 33091 1974 30232 277906;277907;277908;277909;277910;277911;277912;277913;277914;277915;277916;277917;277918;277919;277920;277921;277922;277923 220194;220195;220196;220197;220198;220199;220200;220201;220202 220200 7 LTEVLTDSHVK Unmodified 1240.6663 0.66631685 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.7 2.91 4 1 25 3 2 2 2 2 2 2 2 2 2 2 2 2 3 40.914 40.313 2;3 1.1962E-09 51476 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 168.83 79.473 1711400000 0 338690000 209030000 66405000 73483000 120890000 68874000 78245000 60439000 109540000 105150000 127230000 99793000 111940000 141660000 33092 3641 30233 277924;277925;277926;277927;277928;277929;277930;277931;277932;277933;277934;277935;277936;277937;277938;277939;277940;277941;277942;277943;277944;277945;277946;277947;277948;277949;277950;277951;277952;277953 220203;220204;220205;220206;220207;220208;220209;220210;220211;220212;220213;220214;220215;220216;220217;220218;220219;220220;220221;220222;220223;220224;220225;220226;220227;220228;220229;220230;220231 220209 14 LTEVPVEPVLTVHPESK Unmodified 1873.0197 0.019679395 4376 Q9H307 PNN Pinin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 77.005 75.662 2;3 2.9945E-46 94427 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 150.49 103.76 1067600000 16570000 530740000 9967500 26009000 28803000 29074000 41642000 34727000 31442000 44625000 44627000 63619000 47671000 51602000 66515000 33093 4376 30234 277954;277955;277956;277957;277958;277959;277960;277961;277962;277963;277964;277965;277966;277967;277968;277969;277970 220232;220233;220234;220235;220236;220237;220238;220239;220240;220241;220242;220243;220244;220245;220246;220247;220248;220249;220250;220251;220252;220253;220254 220238 23 LTFDEEAYK Unmodified 1114.5183 0.51825563 4167 Q9BUP3 HTATIP2 Oxidoreductase HTATIP2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 53.662 52.92 2 0.0052023 59913 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 80.438 59.883 437540000 0 82111000 0 13823000 11131000 39988000 18175000 14153000 17318000 42649000 87027000 49615000 42539000 19013000 0 33094 4167 30235 277971;277972;277973;277974;277975;277976;277977;277978;277979;277980;277981;277982;277983;277984 220255;220256;220257;220258;220259;220260;220261;220262;220263;220264;220265;220266 220256 12 LTFDEYR Unmodified 942.4447 0.44469675 968 P12429 ANXA3 Annexin A3 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 50.839 51.229 2 0.023929 56629 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.407 29.604 34649000 0 0 0 0 0 6284300 0 0 0 0 0 0 0 0 28364000 33095 968 30236 277985;277986 220267 220267 1 LTFDEYRNISQK Unmodified 1512.7573 0.75725712 968 P12429 ANXA3 Annexin A3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 63.889 57.9 3 0.010168 76962 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.222 36.477 150960000 95802000 34059000 21102000 0 0 0 0 0 0 0 0 0 0 0 0 33096 968 30237 277987;277988;277989 220268;220269 220269 1 LTFDSSFSPNTGK Unmodified 1399.662 0.66195975 1129 P21796 VDAC1 Voltage-dependent anion-selective channel protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 66.269 65.536 2 0.00067815 74614 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.313 70.613 130960000 0 30558000 0 22566000 5031000 9467500 6634600 11300000 6288300 0 2256300 10506000 7754700 8839800 9757100 33097 1129 30238 277990;277991;277992;277993;277994;277995;277996;277997;277998;277999;278000;278001;278002 220270;220271;220272;220273;220274;220275;220276;220277;220278 220273 9 LTFDSSFSPNTGKK Unmodified 1527.7569 0.75692277 1129 P21796 VDAC1 Voltage-dependent anion-selective channel protein 1 yes yes 0 0 1 By MS/MS 10 0 1 1 56.699 56.03 3 0.00012185 64293 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 73.887 55.054 20233000 0 0 0 20233000 0 0 0 0 0 0 0 0 0 0 0 33098 1129 30239 278003 220279;220280 220280 2 LTFDTTFSPNTGK Unmodified 1427.6933 0.69325988 1485 P45880 VDAC2 Voltage-dependent anion-selective channel protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 72.03 71.476 2 3.5197E-06 88862 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.01 121.91 114520000 0 33264000 0 12984000 4178800 6612700 5923100 7172200 5292200 7102900 5715900 7635600 5281200 5827500 7526400 33099 1485 30240 278004;278005;278006;278007;278008;278009;278010;278011;278012;278013;278014;278015;278016;278017 220281;220282;220283;220284;220285;220286;220287;220288;220289;220290;220291;220292;220293;220294;220295 220284 15 LTFDTTFSPNTGKK Unmodified 1555.7882 0.7882229 1485 P45880 VDAC2 Voltage-dependent anion-selective channel protein 2 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 62.026 61.883 3 0.042786 71540 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 23.138 18.423 19551000 0 0 0 7697900 1654000 0 2658400 5690600 0 0 0 0 0 1850300 0 33100 1485 30241 278018;278019;278020;278021;278022 220296 220296 1 LTFEVELVDID Unmodified 1291.6547 0.65474911 2043 Q00688 FKBP3 Peptidyl-prolyl cis-trans isomerase FKBP3 yes yes 0 0 0 By MS/MS By MS/MS 2 0 4 3 1 99.787 93.075 2 0.023245 116490 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.047 39.579 22243000 18083000 0 4160700 0 0 0 0 0 0 0 0 0 0 0 0 33101 2043 30242 278023;278024;278025;278026 220297;220298;220299 220297 2 LTFLDLR Unmodified 876.5069 0.50690308 4468 Q9H9A6 LRRC40 Leucine-rich repeat-containing protein 40 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.259 81.319 2 0.029029 94321 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 76.035 39.478 206980000 0 0 0 6993100 9907900 20496000 14281000 19113000 10036000 21504000 19259000 23322000 14379000 14002000 33690000 33102 4468 30243 278027;278028;278029;278030;278031;278032;278033;278034;278035;278036;278037;278038 220300;220301 220301 2 LTFLEEDDK Unmodified 1108.5288 0.52882031 4737 Q9NY33 DPP3 Dipeptidyl peptidase 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 63.331 57.342 2 0.0075773 73424 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.033 65.423 472540000 53705000 411420000 7417400 0 0 0 0 0 0 0 0 0 0 0 0 33103 4737 30244 278039;278040;278041 220302 220302 1 LTFLVAQK Unmodified 918.55385 0.55385327 2231 Q13085 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 65.189 65.192 2 0.013529 74902 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 72.138 21.102 22519000 0 0 0 1786200 1448700 3190500 2523500 0 0 0 2764700 5411400 3106800 2287200 0 33104 2231 30245 278042;278043;278044;278045;278046;278047;278048;278049 220303;220304;220305;220306;220307;220308 220303 6 LTFLYLANDVIQNSK Unmodified 1737.9301 0.93013611 4569;3942 Q9NQG5;Q96P16 RPRD1B;RPRD1A Regulation of nuclear pre-mRNA domain-containing protein 1B;Regulation of nuclear pre-mRNA domain-containing protein 1A no no 0 0 0 By MS/MS By matching 10 0 2 1 1 94.483 94.653 2 0.01275 109784 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 44.765 31.102 2495500 0 0 0 0 0 0 0 436810 0 0 0 0 0 0 2058700 33105 4569;3942 30246 278050;278051 220309 220309 1 LTFMDLELK Oxidation (M) 1124.5787 0.57874739 28 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 80.424 80.52 2 0.020527 93087 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 47.869 26.187 25400000 0 0 0 0 1230700 2654200 1101900 1407400 1759800 4382500 0 4208100 1423600 2938500 4293200 33106 28 30247 278052;278053;278054;278055;278056;278057;278058;278059;278060;278061 220310;220311;220312;220313 220310 4 LTFMDLELK Unmodified 1108.5838 0.58383277 28 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 93.343 85.212 2 0.028492 110364 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.897 48.194 4824900 4824900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33107 28 30247 278062 220314 220314 1 LTFNHDGSSR Unmodified 1132.5261 0.52613497 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.522 18.717 2 0.0040176 18521 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 74.376 50.221 55126000 0 0 0 3662200 3034700 3053100 4922800 3696700 3296200 4931400 4241000 6504000 5591900 3456200 8735800 33108 4285 30248 278063;278064;278065;278066;278067;278068;278069;278070;278071;278072;278073;278074 220315;220316;220317;220318;220319;220320;220321;220322 220317 8 LTFNNPTTEFR Unmodified 1338.6568 0.65681479 2089 Q03111 MLLT1 Protein ENL yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.416 70.491 2 0.00015309 81179 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 108.93 75.93 134290000 0 0 0 6713900 6688200 10381000 8918500 11849000 6280400 12048000 13977000 13075000 10873000 11228000 22258000 33109 2089 30249 278075;278076;278077;278078;278079;278080;278081;278082;278083;278084;278085;278086 220323;220324;220325;220326;220327;220328;220329;220330;220331;220332;220333;220334;220335 220324 13 LTFNQGGQPFSEVGEVK Unmodified 1835.9054 0.90537792 4949 Q9UJY4 GGA2 ADP-ribosylation factor-binding protein GGA2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.869 76.929 2 2.3407E-32 87975 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 155.08 138.14 168250000 0 0 0 6686000 9292000 11996000 12088000 15022000 10690000 17797000 13359000 20186000 11038000 16916000 23184000 33110 4949 30250 278087;278088;278089;278090;278091;278092;278093;278094;278095;278096;278097;278098 220336;220337;220338;220339;220340;220341;220342;220343;220344;220345;220346;220347;220348;220349;220350 220346 15 LTFNSLLEK Unmodified 1063.5914 0.59136099 2902 Q6NWY9 PRPF40B Pre-mRNA-processing factor 40 homolog B yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 78.001 77.429 2 0.00387 89029 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.02 53.204 111300000 8729900 0 0 5213900 5600100 5453000 6812200 5885700 8088700 8601500 10455000 11984000 7195900 9497100 17787000 33111 2902 30251 278099;278100;278101;278102;278103;278104;278105;278106;278107;278108;278109;278110;278111 220351;220352;220353;220354;220355;220356;220357;220358;220359 220352 9 LTFRPHSTDSATHR Unmodified 1624.807 0.80700128 3560 Q8WVC0 LEO1 RNA polymerase-associated protein LEO1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 21.189 21.375 4 0.013156 22160 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 37.366 23.013 37792000 0 0 0 0 0 5207900 0 4419800 6571000 2225500 0 0 8687200 10681000 0 33112 3560 30252 278112;278113;278114;278115;278116;278117 220360 220360 1 LTFSCLGGSDNFK Unmodified 1444.6657 0.66566492 2506 Q15185 PTGES3 Prostaglandin E synthase 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 75.187 74.113 2 2.9153E-76 92384 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 219.03 204.63 7109900000 929570000 3103700000 176750000 143800000 129620000 141210000 118130000 176540000 165920000 245670000 390830000 243210000 288080000 262700000 594170000 33113 2506 30253 278118;278119;278120;278121;278122;278123;278124;278125;278126;278127;278128;278129;278130;278131;278132;278133;278134 220361;220362;220363;220364;220365;220366;220367;220368;220369;220370;220371;220372;220373;220374;220375;220376;220377 220364 15 LTGAGGGGCGITLLK Unmodified 1373.7337 0.7336849 2096 Q03426 MVK Mevalonate kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 2 1 1 34.766 34.972 3 0.010342 38544 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 23.481 10.296 188380000 0 0 0 0 9340200 15320000 19030000 15814000 13951000 18780000 50475000 0 31387000 0 14279000 33114 2096 30254 278135;278136;278137;278138;278139;278140;278141;278142;278143;278144 220378;220379 220378 2 LTGDRCTGLSSK Unmodified 1293.6347 0.63469914 1058 P17706 PTPN2 Tyrosine-protein phosphatase non-receptor type 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 18.203 14.711 3 0.0036366 21319 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.519 40.846 122140000 112250000 0 9891000 0 0 0 0 0 0 0 0 0 0 0 0 33115 1058 30255 278145;278146 220380 220380 1 LTGDVEELEIQEK Unmodified 1501.7512 0.75116869 4963 Q9UKF6 CPSF3 Cleavage and polyadenylation specificity factor subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 64.795 63.449 2 1.4255E-08 79710 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 111.63 95.623 384810000 11705000 222450000 1523000 5601000 6919600 14623000 8648200 10130000 6655200 18505000 12783000 17260000 12787000 11237000 23988000 33116 4963 30256 278147;278148;278149;278150;278151;278152;278153;278154;278155;278156;278157;278158;278159;278160;278161;278162 220381;220382;220383;220384;220385;220386;220387;220388;220389;220390;220391;220392;220393;220394;220395;220396 220384 16 LTGDVLQPPGTSVPIVK Unmodified 1719.9771 0.9770863 5073 Q9UQR0 SCML2 Sex comb on midleg-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.035 80.094 2 0.0014414 92600 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 66.498 60.265 84497000 0 0 0 3482400 4546800 6356300 6265700 5826000 5308700 8211500 8129700 10831000 6761600 7638200 11139000 33117 5073 30257 278163;278164;278165;278166;278167;278168;278169;278170;278171;278172;278173;278174 220397;220398;220399;220400;220401;220402;220403;220404;220405 220399 9 LTGEEVNSCVEVLLEEAK Unmodified 2017.9878 0.98778692 1579 P49589 CARS Cysteine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 93.644 89.969 2 1.348E-05 111530 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.84 112.86 10720000 0 10016000 704110 0 0 0 0 0 0 0 0 0 0 0 0 33118 1579 30258 278175;278176 220406 220406 1 LTGEVVALK Unmodified 928.55933 0.55933258 1180 P24941 CDK2 Cyclin-dependent kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50.705 49.638 2 0.0043294 56088 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 87.181 28.577 1262800000 39693000 726470000 29208000 23539000 23357000 62341000 33203000 32297000 24781000 43594000 36066000 45665000 36366000 45304000 60875000 33119 1180 30259 278177;278178;278179;278180;278181;278182;278183;278184;278185;278186;278187;278188;278189;278190;278191 220407;220408;220409;220410;220411;220412;220413;220414;220415;220416;220417;220418;220419;220420;220421;220422;220423 220415 16 LTGGSNWQPK Unmodified 1086.5458 0.54580778 2300 Q13492 PICALM Phosphatidylinositol-binding clathrin assembly protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 31.423 31.69 2 0.0069975 33172 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 63.534 52.023 256810000 0 0 0 0 11304000 20832000 0 0 20432000 24978000 30826000 40246000 22939000 35210000 50040000 33120 2300 30260 278192;278193;278194;278195;278196;278197;278198;278199;278200 220424;220425;220426;220427;220428;220429;220430;220431 220429 4 LTGILQEVK Unmodified 999.59645 0.59644637 378 O43896 KIF1C Kinesin-like protein KIF1C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.046 63.141 2 0.0031099 72310 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 133.86 60.614 229340000 0 0 0 14647000 15780000 17891000 18778000 10998000 16845000 24369000 23414000 32987000 14771000 14294000 24564000 33121 378 30261 278201;278202;278203;278204;278205;278206;278207;278208;278209;278210;278211;278212 220432;220433;220434;220435;220436;220437;220438;220439;220440;220441;220442;220443;220444;220445;220446 220436 15 LTGLGQSNAALR Unmodified 1199.6622 0.66223452 2155 Q08378 GOLGA3 Golgin subfamily A member 3 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 45.362 45.856 2 0.03304 50455 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.422 20.219 13178000 0 0 0 0 0 0 0 0 0 0 0 0 0 4143900 9033800 33122 2155 30262 278213;278214 220447 220447 1 LTGMAFR Unmodified 794.41089 0.4108942 782 P04406;O14556 GAPDH;GAPDHS Glyceraldehyde-3-phosphate dehydrogenase;Glyceraldehyde-3-phosphate dehydrogenase, testis-specific yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 44.261 44.496 2 0.015385 49023 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 118.06 95.766 2557600000 0 0 0 133090000 0 45832000 32008000 48186000 19832000 50799000 370890000 273740000 46100000 284250000 1252900000 33123 782 30263 278215;278216;278217;278218;278219;278220;278221;278222;278223;278224;278225 220448;220449;220450;220451;220452;220453;220454;220455;220456;220457;220458;220459;220460;220461;220462;220463;220464;220465 220461 18 LTGMAFR Oxidation (M) 810.40581 0.40580882 782 P04406;O14556 GAPDH;GAPDHS Glyceraldehyde-3-phosphate dehydrogenase;Glyceraldehyde-3-phosphate dehydrogenase, testis-specific yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 24.597 24.805 2 0.015396 25127 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 88.734 70.968 1157200000 0 0 0 121340000 16497000 21690000 24056000 23792000 0 22303000 148210000 174620000 30188000 92430000 482060000 33124 782 30263 278226;278227;278228;278229;278230;278231;278232;278233;278234;278235;278236 220466;220467;220468;220469;220470;220471;220472;220473 220470 940 8 LTGMAFRVPTANVSVVDLTCR Oxidation (M) 2322.1824 0.18242118 782 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 0 1 1 By MS/MS 10 0 1 1 82.918 83.108 3 1.1447E-21 95842 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.579 84.956 31970000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31970000 33125 782 30264 278237 220474 220474 940 1 LTGMERDLVAIEAK Unmodified 1544.8232 0.82322819 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 77.524 72.286 3 0.0016135 91738 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.842 25.418 121820000 28227000 68740000 24851000 0 0 0 0 0 0 0 0 0 0 0 0 33126 2047 30265 278238;278239;278240 220475;220476;220477 220475 2 LTGMERDLVAIEAK Oxidation (M) 1560.8181 0.81814282 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 61.866 55.825 3 0.0040749 69300 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 56.527 14.318 29691000 8449300 0 21242000 0 0 0 0 0 0 0 0 0 0 0 0 33127 2047 30265 278241;278242 220478 220478 3325 1 LTGPAAVELK Unmodified 997.5808 0.5807963 3911 Q96KQ4 PPP1R13B Apoptosis-stimulating of p53 protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 57.784 51.953 2 0.022543 67003 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 63.076 22.972 16842000 0 16842000 0 0 0 0 0 0 0 0 0 0 0 0 0 33128 3911 30266 278243 220479 220479 1 LTGPALMAVEQELVNK Unmodified 1711.9179 0.91785686 2758 Q5SVZ6 ZMYM1 Zinc finger MYM-type protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 95.451 88.41 2;3 8.0748E-05 112822 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.168 41.4 26770000 17086000 9683800 0 0 0 0 0 0 0 0 0 0 0 0 0 33129 2758 30267 278244;278245;278246 220480;220481;220482 220481 3 LTGRDFSHDDTLDVPTQVELLIK Unmodified 2611.3493 0.34934639 1454 P42345 MTOR Serine/threonine-protein kinase mTOR yes yes 0 0 1 By MS/MS 2 0 1 1 94.307 86.177 4 0.03518 111580 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 23.892 20.55 6171400 6171400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33130 1454 30268 278247 220483 220483 1 LTGRDPNDVRPIQAR Unmodified 1706.9176 0.91761436 4376 Q9H307 PNN Pinin yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.918 30.11 4 0.00021547 31328 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.147 41.89 376480000 0 0 0 22235000 16257000 26347000 27903000 24740000 19122000 37344000 33902000 37628000 38666000 47579000 44754000 33131 4376 30269 278248;278249;278250;278251;278252;278253;278254;278255;278256;278257;278258;278259 220484;220485;220486;220487;220488;220489;220490;220491;220492;220493;220494 220486 11 LTGSLSGWSSPK Unmodified 1218.6245 0.62445203 4061 Q99798 ACO2 Aconitate hydratase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 63.722 56.636 2 0.00033174 75801 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 112.13 87.207 63871000 33786000 30084000 0 0 0 0 0 0 0 0 0 0 0 0 0 33132 4061 30270 278260;278261 220495;220496 220496 2 LTGSSAQEEASGVALGEAPDHSYESLRVTSAQK Unmodified 3374.6226 0.62262072 2223 Q13011 ECH1 Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial yes yes 0 0 1 By MS/MS 2 0 1 1 72.249 69.165 4 6.8895E-10 84632 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 50.229 44.909 18521000 0 0 18521000 0 0 0 0 0 0 0 0 0 0 0 0 33133 2223 30271 278262 220497 220497 1 LTGSTSSLNK Unmodified 1006.5295 0.52948901 4661 Q9NV70 EXOC1 Exocyst complex component 1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15.241 14.972 2 0.0017713 14858 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 95.502 69.765 133520000 0 38646000 600990 4893100 5093600 5712100 8134900 5412500 4604400 8989600 12307000 11835000 7238500 8827800 11222000 33134 4661 30272 278263;278264;278265;278266;278267;278268;278269;278270;278271;278272;278273;278274;278275;278276 220498;220499;220500;220501;220502;220503;220504;220505 220503 5 LTGSVLEDAWK Unmodified 1217.6292 0.62920306 4314 Q9H074 PAIP1 Polyadenylate-binding protein-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 75.449 74.095 2 4.1961E-05 84902 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 116.52 87.6 1420900000 39575000 1047600000 67020000 7389900 10305000 13926000 12695000 16663000 9496200 25537000 33255000 26834000 18331000 23124000 69178000 33135 4314 30273 278277;278278;278279;278280;278281;278282;278283;278284;278285;278286;278287;278288;278289;278290;278291;278292;278293 220506;220507;220508;220509;220510;220511;220512;220513;220514;220515;220516;220517;220518;220519;220520;220521;220522 220510 15 LTGVFAPR Unmodified 859.49159 0.49158736 1905 P62701;Q8TD47;P22090 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 49.141 49.293 2 0.012884 55529 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 73.616 26.85 299950000 0 0 0 18136000 20850000 23160000 24350000 20382000 17429000 33265000 28890000 40816000 36142000 0 36527000 33136 1905 30274 278294;278295;278296;278297;278298;278299;278300;278301;278302;278303;278304 220523;220524;220525;220526;220527;220528;220529;220530 220528 8 LTGVFAPRPSTGPHK Unmodified 1563.8522 0.85216056 1905 P62701;Q8TD47;P22090 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 1 2 1 40.263 40.45 3;4 0.00011604 43864 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.887 59.534 1619500000 0 0 0 43830000 55173000 102910000 86402000 71838000 73650000 111120000 150990000 139930000 134590000 409730000 239330000 33137 1905 30275 278305;278306;278307;278308;278309;278310;278311;278312;278313;278314;278315;278316;278317 220531;220532;220533;220534;220535;220536;220537;220538;220539;220540;220541;220542;220543;220544 220542 6 LTGVIVENENITK Unmodified 1428.7824 0.78240924 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 60.905 60.028 2 7.3977E-10 76201 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 148.19 104.42 278990000 0 103510000 4338200 9933800 9113400 9789400 14087000 11721000 10269000 13174000 19962000 21646000 12966000 12145000 26334000 33138 3443 30276 278318;278319;278320;278321;278322;278323;278324;278325;278326;278327;278328;278329;278330;278331;278332 220545;220546;220547;220548;220549;220550;220551;220552;220553;220554 220546 8 LTHAAPCMLFMK Unmodified 1418.6873 0.68726876 570 O76003 GLRX3 Glutaredoxin-3 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 78.202 72.713 3 8.6802E-06 95421 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.813 71.578 15452000 12080000 0 3372200 0 0 0 0 0 0 0 0 0 0 0 0 33139 570 30277 278333;278334 220555 220555 1 LTHAAPCMLFMK Oxidation (M) 1434.6822 0.68218338 570 O76003 GLRX3 Glutaredoxin-3 yes yes 0 1 0 By MS/MS 2 0 1 1 71.937 63.698 3 0.035645 84693 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.095 28.416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33140 570 30277 278335 220556 220556 1 LTHELPGIK Unmodified 1006.5811 0.58113065 4343 Q9H147 DNTTIP1 Deoxynucleotidyltransferase terminal-interacting protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 40.587 40.766 2 0.0089221 45260 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 68.224 34.427 51203000 0 0 0 3161800 3348300 3918000 4401900 0 2165400 5449300 6186400 5597400 4289800 5068600 7616300 33141 4343 30278 278336;278337;278338;278339;278340;278341;278342;278343;278344;278345;278346 220557;220558;220559;220560;220561;220562;220563;220564;220565 220558 9 LTHFDHYNQYEQQK Unmodified 1849.8384 0.83836099 4814 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 2 2 2 2 2 2 34.47 34.71 3;4 0.00022372 37417 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 76.563 69.431 206050000 0 0 0 6902400 0 16226000 5499300 10546000 11099000 11595000 36546000 30265000 32357000 15988000 29028000 33142 4814 30279 278347;278348;278349;278350;278351;278352;278353;278354;278355;278356;278357;278358;278359;278360;278361;278362;278363;278364;278365;278366;278367;278368 220566;220567;220568;220569;220570;220571 220568 6 LTHSLQEELEK Unmodified 1325.6827 0.68269519 2086 Q03001 DST Dystonin yes yes 0 0 0 By MS/MS 2 0 1 1 45.863 42.011 3 0.014464 52962 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 46.796 29.854 5763100 0 0 5763100 0 0 0 0 0 0 0 0 0 0 0 0 33143 2086 30280 278369 220572;220573 220572 2 LTHSLSTSDITAIPEK Unmodified 1711.8992 0.89922991 259 O15151 MDM4 Protein Mdm4 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 67.609 61.59 3 0.00045853 82047 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.05 31.788 16485000 8657500 0 7827200 0 0 0 0 0 0 0 0 0 0 0 0 33144 259 30281 278370;278371 220574 220574 1 LTHVDSPLEAPAGPLGQVK Unmodified 1928.0367 0.036726442 4128 Q9BSJ8 ESYT1 Extended synaptotagmin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 73.405 73.435 3 0.00014314 84502 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 55.094 49.566 122370000 0 0 0 6267600 12023000 0 0 13398000 0 13433000 0 20868000 14782000 20017000 21582000 33145 4128 30282 278372;278373;278374;278375;278376;278377;278378;278379;278380;278381 220575;220576;220577;220578;220579;220580;220581;220582;220583;220584;220585 220575 11 LTHVLTGK Unmodified 867.5178 0.51780212 4520 Q9HCN8 SDF2L1 Stromal cell-derived factor 2-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 17.097 17.331 2 0.02509 16743 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 58.981 33.154 20803000 0 0 0 0 1157900 0 968380 978810 602380 1730000 2569400 3469500 1847700 2280100 5199000 33146 4520 30283 278382;278383;278384;278385;278386;278387;278388;278389;278390;278391 220586;220587 220587 2 LTHYHEGLPTTR Unmodified 1423.7208 0.72081203 2081 Q02809 PLOD1 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 28.428 28.761 3 0.024166 29802 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.358 38.814 38656000 0 0 0 0 0 2303100 0 0 3518500 2968300 0 7336400 0 13566000 8963700 33147 2081 30284 278392;278393;278394;278395;278396;278397 220588;220589 220588 1 LTIAEER Unmodified 830.44978 0.44978213 1905 P62701;Q8TD47 RPS4X;RPS4Y2 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 28.527 28.757 2 0.021005 30895 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 107.43 20.563 511360000 0 0 0 51554000 40572000 0 0 45142000 21305000 55312000 53192000 95914000 67159000 37029000 44180000 33148 1905 30285 278398;278399;278400;278401;278402;278403;278404;278405;278406;278407 220590;220591;220592;220593;220594;220595;220596 220593 7 LTIAEERDK Unmodified 1073.5717 0.57168818 1905 P62701;Q8TD47 RPS4X;RPS4Y2 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2 yes no 0 0 1 By MS/MS By matching By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 20.736 20.828 2 6.4006E-05 21687 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 155.88 95.078 175740000 0 0 0 0 40693000 16638000 36854000 0 31809000 0 0 0 0 0 49748000 33149 1905 30286 278408;278409;278410;278411;278412 220597;220598;220599 220597 2 LTIAEERDKR Unmodified 1229.6728 0.67279921 1905 P62701;Q8TD47 RPS4X;RPS4Y2 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2 yes no 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 16.128 16.373 3 0.048944 15851 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 59.067 24.347 93849000 0 0 0 0 0 3797100 5739800 3381700 3059000 6334000 7966700 27304000 17591000 5940800 12735000 33150 1905 30287 278413;278414;278415;278416;278417;278418;278419;278420;278421;278422 220600 220600 0 LTIHAENPDSQAVPSAAGAASGEK Unmodified 2320.1295 0.12951721 568 O75970 MPDZ Multiple PDZ domain protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 7 3.69 1 1 3 2 1 1 1 54.898 52.703 3 1.3499E-11 67606 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.198 67.379 41039000 0 31273000 0 0 2869600 0 4420400 2475600 0 0 0 0 0 0 0 33151 568 30288 278423;278424;278425;278426;278427 220601;220602;220603;220604;220605 220602 5 LTIHAPPQELGPPVQR Unmodified 1751.9683 0.96825295 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.53 66.615 3 1.1643E-07 75836 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 60.631 42.714 322830000 0 0 0 15619000 14143000 23984000 24328000 18923000 19753000 33287000 34680000 35859000 10896000 30199000 61159000 33152 965 30289 278428;278429;278430;278431;278432;278433;278434;278435;278436;278437;278438;278439 220606;220607;220608;220609;220610;220611;220612;220613;220614;220615;220616;220617;220618;220619;220620;220621;220622;220623;220624;220625;220626;220627 220620 21 LTIHGDLYYEGK Unmodified 1407.7034 0.70343063 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 3 1 1 63.771 57.477 3 0.0037185 76456 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.375 38.149 47800000 32434000 13267000 2099100 0 0 0 0 0 0 0 0 0 0 0 0 33153 2290 30290 278440;278441;278442;278443;278444 220628;220629;220630;220631 220630 4 LTIIGEEDLPSEEVDQELIEDSQWEEILK Unmodified 3398.6505 0.65045817 701 O95861 BPNT1 3'(2'),5'-bisphosphate nucleotidase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.5 0.5 2 2 2 1 1 99.263 94.904 3 5.1488E-192 118197 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 206.08 195.37 192520000 186100000 2490400 3929400 0 0 0 0 0 0 0 0 0 0 0 0 33154 701 30291 278445;278446;278447;278448 220632;220633;220634;220635 220634 4 LTINPCEISGCPK Unmodified 1487.7112 0.7112349 2460 Q14997 PSME4 Proteasome activator complex subunit 4 yes yes 0 0 0 By MS/MS 2 0 1 1 71.043 65.226 2 0.018237 82988 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.676 41.241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33155 2460 30292 278449 220636 220636 1 LTIPILYVK Unmodified 1058.674 0.67396841 1604 P49840 GSK3A Glycogen synthase kinase-3 alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 89.618 88.828 2 0.021281 102985 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.403 52.403 18723000 6109800 0 0 0 0 1488300 0 850440 0 1396700 768070 1328000 583870 1073900 5124000 33156 1604 30293 278450;278451;278452;278453;278454;278455;278456;278457;278458 220637;220638 220637 2 LTISNGPK Unmodified 828.47052 0.47051757 2439 Q14694 USP10 Ubiquitin carboxyl-terminal hydrolase 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.57 3.96 3 4 1 1 1 1 1 1 1 25.933 24.149 2 0.0087197 31268 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.72 31.434 209300000 10075000 167000000 2922600 7475800 4574400 0 0 0 0 0 0 0 7387400 0 9864800 33157 2439 30294 278459;278460;278461;278462;278463;278464;278465 220639;220640;220641 220639 3 LTISSPLEAHK Unmodified 1194.6608 0.66083754 2528 Q15393 SF3B3 Splicing factor 3B subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 2 1 1 2 1 1 2 2 2 2 2 52.819 53.009 2;3 0.0002908 59831 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 93.598 47.469 2382700000 0 0 0 49474000 57535000 158340000 57818000 80401000 84113000 183880000 328820000 350320000 301550000 249280000 481170000 33158 2528 30295 278466;278467;278468;278469;278470;278471;278472;278473;278474;278475;278476;278477;278478;278479;278480;278481;278482;278483;278484 220642;220643;220644;220645;220646;220647;220648;220649;220650;220651;220652;220653;220654;220655;220656;220657 220653 12 LTITSNPEMTFPGER Oxidation (M) 1707.8138 0.81378572 4387 Q9H3U1 UNC45A Protein unc-45 homolog A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 67.606 67.755 2 2.8381E-07 77676 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 88.187 75.973 92962000 0 0 0 0 4712600 10011000 8658400 6612500 0 12927000 11175000 10468000 9363800 7052900 11982000 33159 4387 30296 278485;278486;278487;278488;278489;278490;278491;278492;278493;278494 220658;220659;220660;220661;220662;220663;220664;220665;220666;220667;220668;220669 220668 5845 12 LTITSNPEMTFPGER Unmodified 1691.8189 0.8188711 4387 Q9H3U1 UNC45A Protein unc-45 homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 77.275 77.311 2 1.4071E-05 88822 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.001 72.766 78968000 0 0 0 3257300 2775900 7327400 0 7162400 0 7480700 6312700 7408500 6342800 7051800 23849000 33160 4387 30296 278495;278496;278497;278498;278499;278500;278501;278502;278503;278504 220670;220671;220672;220673;220674;220675;220676;220677 220671 8 LTLDDIER Unmodified 973.50803 0.50802529 948 P11441 UBL4A Ubiquitin-like protein 4A yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 59.586 59.768 2 0.01042 67165 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.713 37.316 383120000 0 0 0 0 22989000 21650000 30826000 34405000 22515000 35989000 47169000 52417000 35929000 35460000 43776000 33161 948 30297 278505;278506;278507;278508;278509;278510;278511;278512;278513;278514;278515 220678;220679;220680;220681;220682 220679 4 LTLDESYDLVVENK Unmodified 1636.8196 0.8195826 5301 Q9Y6Y8 SEC23IP SEC23-interacting protein yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 84.384 78.871 2 3.5076E-18 99344 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.18 95.664 76686000 14938000 61747000 0 0 0 0 0 0 0 0 0 0 0 0 0 33162 5301 30298 278516;278517;278518 220683;220684;220685 220683 3 LTLDGDTVDSITPDK Unmodified 1588.7832 0.7831971 3426 Q8NEL9 DDHD1 Phospholipase DDHD1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 70.94 71.073 2 1.736E-05 81523 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 87.363 70.731 12764000 0 0 0 0 2448300 0 0 2542200 0 0 0 3900600 0 0 3872800 33163 3426 30299 278519;278520;278521;278522;278523;278524;278525;278526;278527 220686;220687;220688;220689;220690;220691;220692;220693 220687 7 LTLEQGQQLVAEGHPGASQASAR Unmodified 2347.188 0.18803514 241 O15020 SPTBN2 Spectrin beta chain, non-erythrocytic 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 64.994 65.128 3 2.6178E-10 74587 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 67.364 60.594 31432000 0 0 0 4631000 0 4676700 0 0 0 0 5101300 4956500 0 5254900 6811400 33164 241 30300 278528;278529;278530;278531;278532;278533 220694;220695;220696;220697;220698;220699;220700;220701 220696 8 LTLFVNGQPRPLESSQVK Unmodified 2012.1055 0.10547471 3654 Q92734 TFG Protein TFG yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 75.978 74.786 3 0.00013103 85909 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.514 42.519 110290000 25389000 0 0 0 0 0 0 4397600 0 10579000 9929500 0 0 11474000 48524000 33165 3654 30301 278534;278535;278536;278537;278538;278539 220702;220703;220704;220705;220706 220704 5 LTLHGLQQYYVK Unmodified 1461.798 0.79799972 2347;118 O00148;Q13838 DDX39A;DDX39B ATP-dependent RNA helicase DDX39A;Spliceosome RNA helicase DDX39B no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.16 2.46 2 17 1 1 2 2 2 2 2 2 1 2 2 71.216 70.725 2;3 9.4171E-15 91975 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.75 109.45 671520000 25150000 93010000 0 0 0 101460000 0 31499000 37426000 46116000 35037000 45448000 21312000 31106000 203950000 33166 118;2347 30302 278540;278541;278542;278543;278544;278545;278546;278547;278548;278549;278550;278551;278552;278553;278554;278555;278556;278557;278558 220707;220708;220709;220710;220711;220712;220713;220714;220715;220716;220717;220718;220719;220720;220721;220722 220710 13 LTLHVGDGFEFMK Oxidation (M) 1508.7334 0.73335055 1093 P19623 SRM Spermidine synthase yes yes 0 1 0 By MS/MS 2 0 1 1 83.174 78.454 3 0.011707 97586 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 40.751 33.141 29462000 0 29462000 0 0 0 0 0 0 0 0 0 0 0 0 0 33167 1093 30303 278559 220723 220723 1567 1 LTLHVGDGFEFMK Unmodified 1492.7384 0.73843593 1093 P19623 SRM Spermidine synthase yes yes 0 0 0 By MS/MS 2 0 1 1 89.741 84.869 3 0.0068115 105463 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 41.092 28.324 8447900 0 8447900 0 0 0 0 0 0 0 0 0 0 0 0 0 33168 1093 30303 278560 220724 220724 1 LTLIDPETLLPR Unmodified 1379.8024 0.8024164 3170 Q86VP6 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 93.465 93.573 2 3.0352E-08 108606 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 130.94 120.99 78503000 0 0 0 0 1955600 6130200 1767700 3474000 2169400 15465000 7375800 3446400 1507400 5659900 29552000 33169 3170 30304 278561;278562;278563;278564;278565;278566;278567;278568;278569;278570;278571 220725;220726;220727;220728;220729;220730;220731;220732;220733;220734;220735;220736;220737;220738;220739 220728 14 LTLISEDIK Unmodified 1030.591 0.59102664 1068 P18031 PTPN1 Tyrosine-protein phosphatase non-receptor type 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 67.737 67.793 2 0.018261 77514 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 54.982 4.3749 58034000 0 0 0 0 12453000 0 0 0 9038000 0 0 19297000 17246000 0 0 33170 1068 30305 278572;278573;278574;278575 220740;220741;220742;220743 220742 4 LTLLNPK Unmodified 797.50109 0.50108942 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 53.059 51.513 2 0.012863 67960 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 141.55 33.896 13799000000 2085100000 1383900000 221060000 292750000 644890000 589700000 1984200000 2449800000 1927100000 489820000 598330000 911220000 32775000 53205000 135410000 33171 1714 30306 278576;278577;278578;278579;278580;278581;278582;278583;278584;278585;278586;278587;278588;278589;278590;278591;278592 220744;220745;220746;220747;220748;220749;220750;220751;220752;220753;220754;220755;220756;220757;220758;220759;220760;220761;220762;220763;220764 220750 20 LTLLQVASR Unmodified 999.60768 0.60767976 632 O95239 KIF4A Chromosome-associated kinesin KIF4A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 72.065 72.125 2 0.0036563 82772 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 89.355 30.437 155630000 0 0 0 11027000 8879800 14996000 11617000 0 9594600 14296000 16890000 17432000 11799000 13372000 25722000 33172 632 30307 278593;278594;278595;278596;278597;278598;278599;278600;278601;278602;278603 220765;220766;220767;220768;220769;220770;220771;220772;220773 220766 8 LTLNCQNSYVEPHK Unmodified 1701.8145 0.81445442 4765 Q9NZD8 SPG21 Maspardin yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 46.686 46.863 3 0.0017435 52636 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 49.988 44.559 63629000 0 0 0 4434000 2786200 5575800 0 0 2786800 8734900 7746600 8959200 6335200 6819700 9450300 33173 4765 30308 278604;278605;278606;278607;278608;278609;278610;278611;278612;278613 220774;220775;220776;220777;220778;220779;220780 220776 7 LTLNSPIFDK Unmodified 1146.6285 0.62847478 2037 Q00536 CDK16 Cyclin-dependent kinase 16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 76.395 76.422 2 0.011165 88184 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 54.722 15.7 55803000 0 0 0 4507800 0 8457100 0 9750400 6820000 10133000 0 16134000 0 0 0 33174 2037 30309 278614;278615;278616;278617;278618;278619;278620;278621 220781;220782;220783;220784;220785;220786 220782 5 LTLPALQQR Unmodified 1038.6186 0.61857879 1784 P56524 HDAC4 Histone deacetylase 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 68.504 68.622 2 0.027634 78771 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 49.325 14.394 47982000 0 0 0 3766500 0 6161400 4696900 0 4567800 4882200 6311000 5224300 4220100 0 8151300 33175 1784 30310 278622;278623;278624;278625;278626;278627;278628;278629;278630 220787;220788;220789 220787 3 LTLQEFQEGSK Unmodified 1278.6456 0.6455814 1874 P62166 NCS1 Neuronal calcium sensor 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61.495 60.893 2 0.0045367 68767 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.885 59.728 202070000 0 128170000 1447700 4516900 3875500 4732600 3463700 6142900 3185600 6257400 10429000 10413000 4130900 5462900 9849100 33176 1874 30311 278631;278632;278633;278634;278635;278636;278637;278638;278639;278640;278641;278642;278643;278644 220790;220791;220792;220793;220794;220795;220796;220797;220798;220799;220800 220793 11 LTLSALVDGK Unmodified 1015.5914 0.59136099 1485 P45880 VDAC2 Voltage-dependent anion-selective channel protein 2 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 81.335 77.317 2 0.019871 96215 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.841 25.294 30898000 0 30898000 0 0 0 0 0 0 0 0 0 0 0 0 0 33177 1485 30312 278645;278646;278647 220801;220802 220801 2 LTLSEQQEAPATAEPR Unmodified 1739.869 0.86899241 3020 Q6ZW31 SYDE1 Rho GTPase-activating protein SYDE1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 48.875 48.989 2 1.186E-23 55184 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 116.54 102.12 58717000 0 0 0 0 5639900 10711000 5104600 5618900 8100900 11315000 0 0 0 0 12228000 33178 3020 30313 278648;278649;278650;278651;278652;278653;278654;278655;278656 220803;220804;220805;220806;220807;220808 220805 6 LTLSQFQK Unmodified 963.53893 0.53893149 3311 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 54.46 54.63 2 0.0068169 61032 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 95.541 47.693 127800000 0 0 0 22076000 0 0 0 0 0 0 24531000 20226000 26604000 34361000 0 33179 3311 30314 278657;278658;278659;278660;278661;278662;278663 220809;220810;220811;220812;220813 220813 4 LTLTFSAQTK Unmodified 1108.6128 0.61282471 417 O60610 DIAPH1 Protein diaphanous homolog 1 yes yes 0 0 0 By MS/MS 2 0 1 1 74.228 66.098 2 0.037936 86966 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.163 38.329 9487800 9487800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33180 417 30315 278664 220814 220814 0 LTLVCESAPGPITMDLTGDLEALK Unmodified 2543.2863 0.28627713 1690 P52566 ARHGDIB Rho GDP-dissociation inhibitor 2 yes yes 0 0 0 By MS/MS 2 0 1 1 105.46 97.33 2 0.031973 124940 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.666 28.343 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33181 1690 30316 278665 220815 220815 1 LTLVFEHVDQDLTTYLDK Unmodified 2149.0943 0.094300901 2035 Q00534 CDK6 Cyclin-dependent kinase 6 yes yes 0 0 0 By MS/MS 2 0 1 1 97.221 89.091 3 0.0023743 115094 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.716 34.357 15977000 15977000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33182 2035 30317 278666 220816 220816 1 LTMAQLK Unmodified 803.45751 0.45751004 578 O76094 SRP72 Signal recognition particle subunit SRP72 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 42.827 42.985 2 0.022748 48072 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 104.11 51.812 378530000 0 0 0 32452000 33409000 28945000 0 39587000 27881000 36329000 0 48402000 45354000 32621000 53553000 33183 578 30318 278667;278668;278669;278670;278671;278672;278673;278674;278675;278676 220817;220818;220819;220820;220821 220818 5 LTMAQLK Oxidation (M) 819.45242 0.45242467 578 O76094 SRP72 Signal recognition particle subunit SRP72 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 19.941 19.557 2 0.022547 18710 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 71.378 26.847 276600000 0 62449000 0 15518000 11436000 15157000 22478000 18130000 15110000 24257000 20657000 23831000 18942000 13697000 14936000 33184 578 30318 278677;278678;278679;278680;278681;278682;278683;278684;278685;278686;278687;278688;278689;278690 220822;220823;220824;220825;220826;220827;220828;220829 220825 8 LTMLDIASNR Unmodified 1132.591 0.59104341 2535 Q15435 PPP1R7 Protein phosphatase 1 regulatory subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 72.23 72.261 2 0.013116 83161 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 51.445 20.372 35095000 0 0 0 5662700 2031700 0 3467000 0 1991200 5399000 5170000 4681300 2967600 3725000 0 33185 2535 30319 278691;278692;278693;278694;278695;278696;278697;278698;278699 220830;220831;220832;220833 220830 4 LTMLNTVSK Oxidation (M) 1021.5478 0.54778161 4074 Q99961 SH3GL1 Endophilin-A2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.62 1.7 1 20 1 1 2 2 2 1 2 2 2 1 2 2 1 29.252 29.128 2 0.02277 30863 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 46.462 19.5 248340000 52943000 0 0 8052000 6110200 18483000 15756000 12542000 14453000 25145000 29154000 12398000 24577000 18730000 9995200 33186 4074 30320 278700;278701;278702;278703;278704;278705;278706;278707;278708;278709;278710;278711;278712;278713;278714;278715;278716;278717;278718;278719;278720 220834;220835;220836;220837;220838 220837 5 LTMLNTVSK Unmodified 1005.5529 0.55286699 4074 Q99961 SH3GL1 Endophilin-A2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50.131 49.025 2 0.0016964 66771 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 133.86 82.075 1329300000 311730000 563650000 6618900 32845000 0 36067000 29248000 29446000 32370000 42097000 53845000 61122000 30096000 28822000 71354000 33187 4074 30320 278721;278722;278723;278724;278725;278726;278727;278728;278729;278730;278731;278732;278733;278734 220839;220840;220841;220842;220843;220844;220845;220846;220847;220848;220849;220850;220851;220852 220846 14 LTMQITALNENLGTVK Oxidation (M) 1760.9342 0.93423521 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 1 0 By MS/MS 2 0 1 1 78.072 73.297 2 6.7394E-05 91444 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.747 81.655 43185000 0 43185000 0 0 0 0 0 0 0 0 0 0 0 0 0 33188 2495 30321 278735 220853 220853 4102 1 LTMQNLNDR Unmodified 1103.5393 0.53934219 68 CON__P08727;P08727 KRT19 Keratin, type I cytoskeletal 19 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 38.113 38.327 2 0.0025264 43192 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 138.54 0 + 406760000 0 0 0 27089000 0 0 110730000 195090000 0 0 6432100 36685000 30726000 0 0 33189 68 30322 278736;278737;278738;278739;278740;278741 220854;220855;220856;220857;220858;220859 220859 6 LTMQVSSLQR Oxidation (M) 1177.6125 0.61250714 1365 P35659 DEK Protein DEK yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.552 32.737 2 0.0026834 36235 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 74.173 50.597 146090000 0 0 0 11802000 12249000 11364000 11268000 10299000 7371600 14468000 17676000 19935000 13084000 6104600 10470000 33190 1365 30323 278742;278743;278744;278745;278746;278747;278748;278749;278750;278751;278752;278753 220860;220861;220862;220863;220864;220865;220866;220867;220868 220867 2123 9 LTMQVSSLQR Unmodified 1161.6176 0.61759251 1365 P35659 DEK Protein DEK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 54.593 54.475 2 0.00054669 61792 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 137.14 95.706 97249000 0 0 0 20030000 16779000 14876000 14527000 17412000 13625000 0 0 0 0 0 0 33191 1365 30323 278754;278755;278756;278757;278758;278759 220869;220870;220871;220872;220873;220874 220872 6 LTMQVSSLQREPFTIAQGK Oxidation (M) 2149.1201 0.1201385 1365 P35659 DEK Protein DEK yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 70.352 70.42 3 1.1686E-25 80884 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 104.61 101 307260000 0 0 0 9687100 17882000 30560000 0 23059000 27536000 32498000 39974000 41316000 21449000 18139000 45156000 33192 1365 30324 278760;278761;278762;278763;278764;278765;278766;278767;278768;278769;278770 220875;220876;220877;220878;220879;220880;220881;220882;220883;220884;220885 220876 2123 11 LTMQVSSLQREPFTIAQGK Unmodified 2133.1252 0.12522387 1365 P35659 DEK Protein DEK yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 78.739 78.895 3 7.7909E-49 90739 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 135.09 121.86 75333000 0 0 0 0 0 0 0 0 0 11811000 19020000 0 3652500 0 40849000 33193 1365 30324 278771;278772;278773;278774 220886;220887;220888;220889 220888 4 LTMVPPNIAELK Oxidation (M) 1340.7374 0.7373733 2530 Q15404 RSU1 Ras suppressor protein 1 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 77.359 73.232 2 0.00031225 91756 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.561 77.228 96194000 0 96194000 0 0 0 0 0 0 0 0 0 0 0 0 0 33194 2530 30325 278775;278776 220890;220891 220891 4167 2 LTMVPPNIAELK Unmodified 1324.7425 0.74245868 2530 Q15404 RSU1 Ras suppressor protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 83.482 82.868 2 0.004791 95407 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.404 39.174 313490000 0 274170000 3764600 0 0 2605000 1518400 2657200 0 3429900 3189000 3120000 0 4671700 14364000 33195 2530 30325 278777;278778;278779;278780;278781;278782;278783;278784;278785;278786 220892;220893 220893 1 LTMVVLSSEK Oxidation (M) 1121.6002 0.60021112 3465 Q8NI27 THOC2 THO complex subunit 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 42.354 42.404 2 0.0065365 47287 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 56.916 39.53 35106000 0 0 0 2806900 3002600 3655600 4137300 0 3673200 4608100 4191400 0 4540600 4490100 0 33196 3465 30326 278787;278788;278789;278790;278791;278792;278793;278794;278795 220894;220895;220896;220897;220898;220899;220900 220897 4997 6 LTMVVLSSEK Unmodified 1105.6053 0.60529649 3465 Q8NI27 THOC2 THO complex subunit 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 70.972 65.012 2 0.011597 72983 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.267 45.117 16528000 15241000 0 1286600 0 0 0 0 0 0 0 0 0 0 0 0 33197 3465 30326 278796;278797;278798;278799;278800;278801;278802;278803;278804;278805 220901;220902;220903;220904;220905;220906;220907;220908;220909 220904 9 LTNAEGVEFK Unmodified 1106.5608 0.56078914 578 O76094 SRP72 Signal recognition particle subunit SRP72 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 42.289 41.502 2 7.202E-08 46461 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 152.34 124.85 1357600000 0 310880000 5123900 56056000 50529000 76802000 78963000 100150000 68921000 92055000 123640000 108100000 109030000 63716000 113670000 33198 578 30327 278806;278807;278808;278809;278810;278811;278812;278813;278814;278815;278816;278817;278818;278819;278820 220910;220911;220912;220913;220914;220915;220916;220917;220918;220919;220920;220921;220922;220923;220924;220925;220926 220912 17 LTNAGYDYLALK Unmodified 1340.6976 0.69761697 4197 Q9BVS4 RIOK2 Serine/threonine-protein kinase RIO2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 73.366 73.386 2 8.2966E-06 84512 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 109.42 84.643 28520000 0 0 0 3591500 0 0 3144500 0 0 0 6904500 0 8827300 6051700 0 33199 4197 30328 278821;278822;278823;278824;278825;278826;278827 220927;220928;220929;220930;220931;220932 220928 6 LTNEDFRK Unmodified 1021.5193 0.51925868 2236 Q13123 IK Protein Red yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 20.531 16.82 2 0.031946 21414 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 103.91 51.504 45441000 13203000 14204000 18033000 0 0 0 0 0 0 0 0 0 0 0 0 33200 2236 30329 278828;278829;278830 220933 220933 0 LTNENLDLK Unmodified 1058.5608 0.56078914 5006 Q9ULV0 MYO5B Unconventional myosin-Vb yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 41.043 41.227 2 0.0087831 46138 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 68.625 33.33 62312000 0 0 0 5403300 4746600 4864800 5404300 0 0 5307500 7033600 7049900 9207200 5385100 7909600 33201 5006 30330 278831;278832;278833;278834;278835;278836;278837;278838;278839;278840 220934;220935;220936;220937;220938;220939;220940;220941 220934 8 LTNENLDLMEQLEK Unmodified 1688.8291 0.82910143 5204 Q9Y4I1 MYO5A Unconventional myosin-Va yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 76.312 76.412 3 0.015231 88276 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 34.179 0.39636 16942000 0 0 0 0 0 5408600 0 0 0 0 0 11533000 0 0 0 33202 5204 30331 278841;278842 220942;220943 220942 2 LTNENMEITSALQSEQHVK Unmodified 2171.0528 0.052846792 2156 Q08379 GOLGA2 Golgin subfamily A member 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.12 3.26 1 1 6 2 1 1 1 1 1 1 68.978 67.986 3 0.0036978 87201 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 22.571 16.434 117670000 0 61821000 0 0 0 7020900 0 0 6685300 11956000 12018000 11488000 0 6677500 0 33203 2156 30332 278843;278844;278845;278846;278847;278848;278849;278850 220944;220945;220946 220945 3 LTNENMEITSALQSEQHVK Oxidation (M) 2187.0478 0.047761414 2156 Q08379 GOLGA2 Golgin subfamily A member 2 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 66.231 60.909 3 8.6328E-05 74474 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 54.805 50.453 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33204 2156 30332 278851;278852 220947;220948 220948 3468 2 LTNLEGIYNSETEK Unmodified 1609.7835 0.78353145 5204 Q9Y4I1 MYO5A Unconventional myosin-Va yes yes 0 0 0 By MS/MS 2 0 1 1 70.839 65.022 2 0.0021878 82670 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.363 77.131 26411000 0 26411000 0 0 0 0 0 0 0 0 0 0 0 0 0 33205 5204 30333 278853 220949 220949 0 LTNLQEGIIPK Unmodified 1224.7078 0.70778773 4325 Q9H0E3 SAP130 Histone deacetylase complex subunit SAP130 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.475 66.559 2 0.0072376 76374 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 54.539 35.186 142090000 0 0 0 9784900 8166200 9049400 10471000 12583000 7844600 12646000 13997000 15071000 12010000 10862000 19602000 33206 4325 30334 278854;278855;278856;278857;278858;278859;278860;278861;278862;278863;278864;278865 220950;220951;220952;220953;220954;220955;220956;220957;220958 220950 7 LTNLQENLSEVSQVK Unmodified 1700.8945 0.89447888 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 3.67 2.87 3 2 1 4 1 1 75.79 72.442 2;3 4.5389E-234 90362 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 265.75 226.45 852910000 0 838750000 3307000 10858000 0 0 0 0 0 0 0 0 0 0 0 33207 1286 30335 278866;278867;278868;278869;278870;278871 220959;220960;220961;220962;220963 220959 4 LTNNISDK Unmodified 903.46616 0.46616048 255 O15119;Q13207 TBX3;TBX2 T-box transcription factor TBX3;T-box transcription factor TBX2 yes no 0 0 0 By MS/MS 2.5 0.5 1 1 2 14.829 11.396 2 0.0025303 15396 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.67 43.728 21587000 0 21587000 0 0 0 0 0 0 0 0 0 0 0 0 0 33208 255 30336 278872;278873 220964;220965 220965 2 LTNSAEVAK Unmodified 931.49746 0.4974606 2175 Q0VDF9 HSPA14 Heat shock 70 kDa protein 14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.57 3.96 3 4 1 2 1 1 1 1 12.444 11.561 2 0.0093036 14479 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.696 15.982 110210000 16893000 75558000 0 0 0 0 0 2890500 0 0 0 4437500 0 3089800 7343800 33209 2175 30337 278874;278875;278876;278877;278878;278879;278880 220966;220967;220968 220967 3 LTNSMMMHGR Unmodified 1176.5202 0.52020343 1512 P46782 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 2 1 2 2 1 2 2 2 2 2 2 27.222 27.453 2;3 0.012211 28174 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.338 73.692 445460000 0 0 0 12601000 27264000 23795000 18559000 30374000 9495400 34678000 48654000 41759000 41566000 55284000 101430000 33210 1512 30338 278881;278882;278883;278884;278885;278886;278887;278888;278889;278890;278891;278892;278893;278894;278895;278896;278897;278898;278899;278900;278901 220969;220970;220971;220972;220973;220974;220975;220976;220977;220978;220979;220980 220971 5 LTNSMMMHGR 2 Oxidation (M) 1208.51 0.51003267 1512 P46782 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 3 2 1 2 2 2 2 1 2 3 1 2 8.2968 8.4137 3 0.0030551 6493 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 51.276 45.241 245810000 0 0 0 19305000 11383000 9810500 9735900 12165000 10046000 16598000 31742000 42129000 55084000 12340000 15476000 33211 1512 30338 278902;278903;278904;278905;278906;278907;278908;278909;278910;278911;278912;278913;278914;278915;278916;278917;278918;278919;278920;278921;278922;278923;278924 220981;220982;220983;220984 220982 2389;2390;2391 1 LTNSMMMHGR Oxidation (M) 1192.5151 0.51511805 1512 P46782 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 25 2 2 1 2 3 2 3 2 2 2 2 2 17.781 17.972 3 0.0037272 19186 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 51.445 43.8 297470000 0 0 0 16847000 23026000 12293000 14765000 27086000 12489000 27284000 28776000 38708000 32469000 27303000 36424000 33212 1512 30338 278925;278926;278927;278928;278929;278930;278931;278932;278933;278934;278935;278936;278937;278938;278939;278940;278941;278942;278943;278944;278945;278946;278947;278948;278949 220985;220986;220987;220988;220989;220990;220991;220992;220993 220993 2389;2390;2391 3 LTNSMMMHGR 3 Oxidation (M) 1224.5049 0.5049473 1512 P46782 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes yes 0 3 0 By MS/MS 10 0 1 1 5.5349 5.8098 3 0.012832 3444 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 49.06 42.757 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33213 1512 30338 278950 220994 220994 2389;2390;2391 1 LTNSSSTGTVGK Unmodified 1150.583 0.58298115 3016 Q6ZU65 UBN2 Ubinuclein-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 9.4547 9.5804 2 0.0034554 8021 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.342 39.717 15649000 0 0 0 2071200 803360 0 1185200 0 1054000 2128800 0 2772500 1797200 1087400 2749300 33214 3016 30339 278951;278952;278953;278954;278955;278956;278957;278958;278959;278960 220995;220996;220997;220998 220998 4 LTNVAATSGDGYRGQTSPHTPNEK Unmodified 2500.1942 0.19424273 2663 Q32P28 LEPRE1 Prolyl 3-hydroxylase 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 33.822 34.25 4 0.00025425 36532 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.576 32.982 59401000 0 0 0 0 0 11783000 0 0 0 0 10257000 15747000 5389100 5241500 10983000 33215 2663 30340 278961;278962;278963;278964;278965;278966 220999;221000 220999 1 LTNVAVVR Unmodified 870.5287 0.52870115 5146 Q9Y3A5 SBDS Ribosome maturation protein SBDS yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.087 36.267 2 0.004491 40561 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 131.04 73.934 269260000 0 0 0 17098000 14751000 28640000 24206000 17085000 13712000 23315000 25217000 29128000 17118000 20011000 38982000 33216 5146 30341 278967;278968;278969;278970;278971;278972;278973;278974;278975;278976;278977;278978 221001;221002;221003;221004;221005;221006;221007;221008;221009;221010;221011;221012 221012 11 LTPEAANPFFK Unmodified 1233.6394 0.63937381 3024 Q70CQ2 USP34 Ubiquitin carboxyl-terminal hydrolase 34 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 79.014 75.344 2 0.044128 91632 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 48.091 29.113 50858000 0 48860000 1998100 0 0 0 0 0 0 0 0 0 0 0 0 33217 3024 30342 278979;278980 221013 221013 1 LTPEEEEILNK Unmodified 1313.6715 0.6714618 1877 P62241 RPS8 40S ribosomal protein S8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 57.687 56.36 2 5.2995E-09 71782 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 137.14 112.98 4992300000 47248000 2379300000 24670000 138270000 136880000 149750000 147360000 160290000 156560000 216890000 276440000 337040000 302710000 205790000 313140000 33218 1877 30343 278981;278982;278983;278984;278985;278986;278987;278988;278989;278990;278991;278992;278993;278994;278995;278996 221014;221015;221016;221017;221018;221019;221020;221021;221022;221023;221024;221025;221026;221027;221028;221029;221030;221031;221032;221033 221018 18 LTPEEEEILNKK Unmodified 1441.7664 0.76642482 1877 P62241 RPS8 40S ribosomal protein S8 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.53 3 2 11 4 1 1 1 1 1 1 1 1 1 1 1 1 50.76 49.294 2;3 7.3005E-09 55193 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 116.74 102.05 635910000 0 178030000 5669000 24935000 34051000 0 27845000 31702000 19298000 46748000 61738000 59141000 55424000 32785000 58543000 33219 1877 30344 278997;278998;278999;279000;279001;279002;279003;279004;279005;279006;279007;279008;279009;279010;279011;279012 221034;221035;221036;221037;221038;221039;221040;221041;221042;221043;221044;221045;221046;221047;221048;221049;221050 221043 17 LTPEEIERMVNDAEK Unmodified 1772.8615 0.86146419 932 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 87.655 82.374 3 0.0069231 105234 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 37.092 25.821 11748000 7144800 0 4602800 0 0 0 0 0 0 0 0 0 0 0 0 33220 932 30345 279013;279014 221051;221052 221051 2 LTPEFSQR Unmodified 976.49779 0.49779495 370 O43813 LANCL1 LanC-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 36.135 36.142 2 0.036816 39754 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 51.662 30.374 98410000 0 0 0 13159000 13555000 0 13848000 16088000 0 0 0 41759000 0 0 0 33221 370 30346 279015;279016;279017;279018;279019 221053 221053 1 LTPFMVNSVLAEGK Unmodified 1504.796 0.79595081 3451 Q8NFZ0 FBXO18 F-box only protein 18 yes yes 0 0 0 By MS/MS 2 0 1 1 91.123 86.227 2 0.0032012 107200 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.045 51.058 13345000 0 13345000 0 0 0 0 0 0 0 0 0 0 0 0 0 33222 3451 30347 279020 221054 221054 1 LTPGEVYNLATCSTK Unmodified 1652.808 0.80797206 2584 Q15818 NPTX1 Neuronal pentraxin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 81.598 76.209 2 0.00043685 96041 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.914 65.025 60630000 12277000 48353000 0 0 0 0 0 0 0 0 0 0 0 0 0 33223 2584 30348 279021;279022;279023;279024 221055;221056;221057;221058;221059;221060 221056 6 LTPITYPQGLAMAK Oxidation (M) 1518.8116 0.81160087 1936 P63000 RAC1 Ras-related C3 botulinum toxin substrate 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 73.888 73.269 2 0.00024307 84808 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 74.841 56.529 82774000 0 36388000 0 0 0 0 5028200 0 0 0 0 12753000 7816500 9180400 11608000 33224 1936 30349 279025;279026;279027;279028;279029;279030;279031;279032 221061;221062;221063;221064;221065;221066;221067;221068 221067 3113 8 LTPITYPQGLAMAK Unmodified 1502.8167 0.81668625 1936 P63000 RAC1 Ras-related C3 botulinum toxin substrate 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 80.014 78.647 2 0.00061198 90943 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.5 52.147 104670000 10625000 54302000 0 1845000 0 0 0 4408600 0 0 5066300 5389200 3444600 4284700 15301000 33225 1936 30349 279033;279034;279035;279036;279037;279038;279039;279040;279041 221069;221070;221071;221072;221073;221074;221075 221070 7 LTPKPETSFEENDGNIILGATVDTQLCDK Unmodified 3204.5496 0.54963869 3180 Q86W92 PPFIBP1 Liprin-beta-1 yes yes 0 0 1 By MS/MS 2 0 1 1 88.463 80.333 3 5.6205E-08 104560 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.299 43.403 10379000 10379000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33226 3180 30350 279042 221076 221076 1 LTPLLSVR Unmodified 897.56475 0.56475231 4230 Q9BXP5 SRRT Serrate RNA effector molecule homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.287 67.37 2 0.011799 77551 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 113.89 35.273 384980000 0 0 0 21886000 20254000 26006000 29110000 21423000 21387000 37551000 33090000 42692000 32912000 36078000 62592000 33227 4230 30351 279043;279044;279045;279046;279047;279048;279049;279050;279051;279052;279053;279054 221077;221078;221079;221080;221081;221082 221081 0 LTPLLSVRESLSEEEAQK Unmodified 2028.0739 0.07389981 4230 Q9BXP5 SRRT Serrate RNA effector molecule homolog yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 83.99 77.565 3 0.010465 99097 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 36.637 28.143 166920000 125260000 41667000 0 0 0 0 0 0 0 0 0 0 0 0 0 33228 4230 30352 279055;279056 221083;221084 221084 2 LTPLPEDNSMNVDQDGDPSDR Unmodified 2314.0019 0.0019334331 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 2 2 2 1 1 1 2 2 2 64.337 64.357 2;3 0.00033752 73022 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.823 40.019 133890000 0 0 0 9481400 6076900 27205000 3171900 0 0 0 7180300 15155000 13881000 16138000 35598000 33229 1986 30353 279057;279058;279059;279060;279061;279062;279063;279064;279065;279066;279067;279068;279069;279070;279071 221085;221086;221087;221088;221089 221086 5 LTPLQLEIQR Unmodified 1209.7081 0.70812208 3308 Q8N163 CCAR2 Cell cycle and apoptosis regulator protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.758 75.821 2 0.0023379 87433 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 84.615 56.872 133330000 0 0 0 6295200 7995800 10380000 8108100 9038300 5139100 12181000 9992400 19473000 14270000 9172400 21287000 33230 3308 30354 279072;279073;279074;279075;279076;279077;279078;279079;279080;279081;279082;279083 221090;221091;221092;221093;221094;221095;221096;221097;221098;221099;221100;221101 221099 11 LTPLSHEVISR Unmodified 1250.6983 0.69828568 1427 P41091;Q2VIR3 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein yes no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.67 1.6 1 23 1 2 2 1 2 2 2 2 2 2 2 1 3 46.597 46.441 2;3 0.00046794 52105 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 77.593 63.507 1646700000 165510000 0 0 64915000 76348000 19939000 102300000 97157000 76004000 151000000 147090000 208010000 118240000 107630000 312530000 33231 1427 30355 279084;279085;279086;279087;279088;279089;279090;279091;279092;279093;279094;279095;279096;279097;279098;279099;279100;279101;279102;279103;279104;279105;279106;279107 221102;221103;221104;221105;221106;221107;221108;221109;221110;221111;221112;221113;221114;221115;221116;221117;221118;221119 221112 16 LTPNAGSDR Unmodified 929.45666 0.45665842 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 10.037 10.147 2 0.036457 9081 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 45.68 33.092 63217000 0 0 0 4003900 2811100 4676900 5401100 4345700 3358800 5693000 0 9539500 6777900 6327700 10281000 33232 1601 30356 279108;279109;279110;279111;279112;279113;279114;279115;279116;279117;279118 221120 221120 1 LTPPVLEEMGHCDSVYLSEVGDTQVVVFK Unmodified 3247.5781 0.57810205 1641 P50990 CCT8 T-complex protein 1 subunit theta yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 97.014 91.197 3 1.8281E-11 115374 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.972 59.815 180050000 180050000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33233 1641 30357 279119;279120 221121;221122 221122 2 LTPPVLEEMGHCDSVYLSEVGDTQVVVFK Oxidation (M) 3263.573 0.57301667 1641 P50990 CCT8 T-complex protein 1 subunit theta yes yes 0 1 0 By MS/MS 2 0 1 1 94.308 86.177 3 5.5954E-09 111544 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.415 59.325 42693000 42693000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33234 1641 30357 279121 221123;221124 221124 2637 2 LTPQAFSHFTFER Unmodified 1579.7783 0.77832691 150 O00418 EEF2K Eukaryotic elongation factor 2 kinase yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 77.597 77.823 3 0.00061063 89470 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.09 47.613 19002000 0 0 0 0 0 0 0 0 0 0 0 6786600 0 0 12215000 33235 150 30358 279122;279123 221125 221125 1 LTPQGQR Unmodified 798.4348 0.43480077 1401 P39019 RPS19 40S ribosomal protein S19 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 2 2 1 2 1 2 3 1 1 1 2 1 6.7336 6.8408 2 0.023118 5102 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 102.98 47.539 154430000 0 0 0 8904200 13491000 14582000 11633000 11972000 13950000 33957000 907300 10412000 11189000 8940300 14493000 33236 1401 30359 279124;279125;279126;279127;279128;279129;279130;279131;279132;279133;279134;279135;279136;279137;279138;279139;279140;279141;279142 221126;221127;221128;221129;221130;221131;221132;221133 221132 8 LTPQGQRDLDR Unmodified 1297.6739 0.67386184 1401 P39019 RPS19 40S ribosomal protein S19 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 1 1 2 18.915 19.11 3 0.021059 19539 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 34.695 21.016 57903000 0 0 0 4666100 3596900 3255200 4174500 3807900 3663800 4530100 7089900 9435200 6906700 5085500 1690600 33237 1401 30360 279143;279144;279145;279146;279147;279148;279149;279150;279151;279152;279153;279154;279155 221134;221135 221134 2 LTPQGQRDLDRIAGQVAAANK Unmodified 2221.1927 0.19272659 1401 P39019 RPS19 40S ribosomal protein S19 yes yes 0 0 2 By MS/MS 2 0 1 1 75.094 66.963 3 0.0012326 88459 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.564 42.269 9504700 9504700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33238 1401 30361 279156 221136 221136 1 LTPQHDQIQTQPLGK Unmodified 1702.9002 0.90023296 4553 Q9NPI6 DCP1A mRNA-decapping enzyme 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 38.714 38.869 3 0.0079251 43591 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 27.255 14.737 45060000 0 0 0 3653500 3826000 0 3394100 2373200 0 5558200 0 7620800 8733500 0 9900900 33239 4553 30362 279157;279158;279159;279160;279161;279162;279163;279164 221137;221138;221139;221140;221141 221141 5 LTPQMFQQLMK 2 Oxidation (M) 1395.689 0.6890429 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 33 3 3 3 4 3 3 1 4 2 3 2 2 60.679 60.776 2 0.00014724 72470 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 84.743 61.962 427830000 0 0 0 31996000 18504000 44917000 56873000 24992000 31729000 20242000 61026000 47789000 45621000 18900000 25239000 33240 2102 30363 279165;279166;279167;279168;279169;279170;279171;279172;279173;279174;279175;279176;279177;279178;279179;279180;279181;279182;279183;279184;279185;279186;279187;279188;279189;279190;279191;279192;279193;279194;279195;279196;279197 221142;221143;221144;221145;221146;221147;221148;221149;221150;221151;221152;221153;221154;221155;221156;221157;221158;221159;221160;221161;221162;221163;221164;221165;221166;221167 221164 3404;3405 17 LTPQMFQQLMK Oxidation (M) 1379.6941 0.69412828 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.72 1.46 1 28 1 2 2 2 2 2 2 3 2 2 3 3 3 77.471 77.1 2 5.769E-05 84732 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 111.17 93.694 382280000 12077000 0 0 24719000 10546000 15298000 10632000 0 13079000 53948000 18921000 29058000 59109000 37449000 97440000 33241 2102 30363 279198;279199;279200;279201;279202;279203;279204;279205;279206;279207;279208;279209;279210;279211;279212;279213;279214;279215;279216;279217;279218;279219;279220;279221;279222;279223;279224;279225;279226 221168;221169;221170;221171;221172;221173;221174;221175;221176;221177;221178;221179;221180;221181;221182;221183;221184;221185;221186;221187;221188;221189;221190;221191;221192;221193 221174 3404;3405 25 LTPQMFQQLMK Unmodified 1363.6992 0.69921365 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 84.251 84.316 2 2.3341E-05 97762 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 141.47 123.15 267360000 0 0 0 4435300 9757400 18657000 8743700 24983000 13941000 27062000 16589000 29890000 10092000 19762000 83447000 33242 2102 30363 279227;279228;279229;279230;279231;279232;279233;279234;279235;279236;279237;279238 221194;221195;221196;221197;221198;221199;221200;221201;221202;221203;221204;221205;221206 221204 13 LTPSGSISLIK Unmodified 1114.6598 0.6597749 317 O43314 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 66.974 67.007 2 0.046254 76541 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 35.826 20.194 32207000 0 0 0 2516400 2523200 0 3713900 3052000 2123100 5163900 4962600 4918800 3232600 0 0 33243 317 30364 279239;279240;279241;279242;279243;279244;279245;279246;279247 221207 221207 1 LTPSGYEWGR Unmodified 1164.5564 0.55637247 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.488 52.632 2 0.0041248 58601 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 73.985 64.397 210640000 0 0 0 7179100 8676200 12570000 10001000 12404000 9227800 22806000 23817000 30100000 18937000 22394000 32534000 33244 2930 30365 279248;279249;279250;279251;279252;279253;279254;279255;279256;279257;279258;279259 221208;221209;221210;221211;221212;221213 221210 5 LTPSGYEWGRQNTDK Unmodified 1750.8275 0.82746195 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 49.928 44.007 3 0.0050629 55503 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 52.527 37.736 144760000 135800000 0 8964500 0 0 0 0 0 0 0 0 0 0 0 0 33245 2930 30366 279260;279261 221214;221215 221215 2 LTPSPDIIVLSDNEASSPR Unmodified 2010.0269 0.026949617 3594 Q8WXI9 GATAD2B Transcriptional repressor p66-beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 2 1 1 1 1 1 1 2 2 2 1 81.057 81.106 2;3 9.9486E-13 93949 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 91.076 77.649 106510000 0 0 0 5383600 10398000 7440900 6484700 7417000 4075300 7307300 9262000 15492000 11593000 9276900 12375000 33246 3594 30367 279262;279263;279264;279265;279266;279267;279268;279269;279270;279271;279272;279273;279274;279275;279276;279277 221216;221217;221218;221219;221220;221221;221222;221223;221224;221225;221226;221227;221228;221229 221226 14 LTPTEVK Unmodified 786.44872 0.4487195 1194 P25787 PSMA2 Proteasome subunit alpha type-2 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 20.338 20.538 2 0.038679 21477 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 69.383 28.531 267040000 0 0 0 32071000 9992100 0 0 12156000 0 0 60299000 0 0 39171000 113350000 33247 1194 30368 279278;279279;279280;279281;279282;279283 221230 221230 1 LTPTHGEMRK Oxidation (M) 1184.5972 0.59719142 3421 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS 7 3.69 1 1 3 2 1 1 1 5.9003 4.5911 3 0.0059877 3639 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 44.863 25.548 47613000 0 32750000 0 0 3574500 4785800 0 0 0 0 0 0 6503100 0 0 33248 3421 30369 279284;279285;279286;279287;279288 221231;221232 221232 4966 2 LTPTHGEMRK Unmodified 1168.6023 0.6022768 3421 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 10.551 8.225 3 0.0066657 13354 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.401 42.824 412040000 393150000 9703500 0 0 0 0 0 0 0 0 0 0 0 9183600 0 33249 3421 30369 279289;279290;279291 221233;221234 221233 2 LTPVAYGCK Unmodified 1007.511 0.51100218 433 O60825;P16118;Q16877 PFKFB2;PFKFB1;PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase;6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 1;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase;6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 4;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35.552 34.88 2 0.0081255 37946 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 70.525 43.388 380920000 12082000 204460000 0 9787800 11667000 15933000 10819000 10423000 11760000 15433000 15850000 20547000 13692000 12409000 16062000 33250 433 30370 279292;279293;279294;279295;279296;279297;279298;279299;279300;279301;279302;279303;279304;279305 221235;221236;221237;221238;221239;221240;221241;221242;221243;221244;221245;221246 221244 12 LTPVLLAK Unmodified 853.56369 0.56368968 2317 Q13561 DCTN2 Dynactin subunit 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62.766 61.843 1;2 0.03349 69436 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 53.679 25.975 447420000 12903000 27809000 0 14508000 22556000 34407000 27234000 26356000 16388000 41459000 47416000 40141000 32928000 33862000 69456000 33251 2317 30371 279306;279307;279308;279309;279310;279311;279312;279313;279314;279315;279316;279317;279318;279319 221247;221248;221249;221250 221250 3 LTPVPDSFFAK Unmodified 1220.6441 0.64412484 601 O94906 PRPF6 Pre-mRNA-processing factor 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 79.597 79.401 2 0.00053837 91773 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 81.972 58.016 730410000 0 16645000 0 40390000 40120000 39937000 47506000 60229000 43064000 69414000 70411000 85408000 73270000 63742000 80272000 33252 601 30372 279320;279321;279322;279323;279324;279325;279326;279327;279328;279329;279330;279331;279332 221251;221252;221253;221254;221255;221256;221257;221258;221259;221260;221261;221262;221263;221264 221258 14 LTPVRPAAASPIVSGAR Unmodified 1661.9577 0.95768826 5109 Q9Y2K7 KDM2A Lysine-specific demethylase 2A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 53.821 54.035 3 0.0035059 60718 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 27.271 17.734 75229000 0 0 0 0 10964000 7117800 7206000 0 7647500 6468000 7053900 8668400 6424900 4367400 9310600 33253 5109 30373 279333;279334;279335;279336;279337;279338;279339;279340;279341;279342 221265;221266;221267;221268;221269;221270;221271 221271 7 LTPVSLSNSPIK Unmodified 1254.7184 0.71835242 1498 P46100 ATRX Transcriptional regulator ATRX yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 69.408 68.323 2 0.0045082 88983 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.827 58.875 128520000 21205000 55153000 0 2901500 2901000 3439600 3891900 3402000 2576800 5036800 6357200 5263400 5055000 4486600 6845800 33254 1498 30374 279343;279344;279345;279346;279347;279348;279349;279350;279351;279352;279353;279354;279355;279356;279357 221272;221273;221274;221275;221276;221277;221278;221279;221280 221277 7 LTPVSPESSSTEEK Unmodified 1489.7148 0.71478318 2303 Q13501 SQSTM1 Sequestosome-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.029 31.219 2 6.0689E-17 33369 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 123.67 109.74 866200000 0 0 0 49354000 48294000 73114000 60842000 51071000 47784000 79761000 74469000 107330000 94776000 74127000 105280000 33255 2303 30375 279358;279359;279360;279361;279362;279363;279364;279365;279366;279367;279368;279369 221281;221282;221283;221284;221285;221286;221287;221288;221289;221290;221291;221292;221293;221294 221292 14 LTPYEVDELR Unmodified 1233.6241 0.62411768 3670 Q92841 DDX17 Probable ATP-dependent RNA helicase DDX17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 64.585 64.687 2 0.0070493 74020 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 72.643 45.34 240720000 0 0 0 10418000 0 28336000 14008000 16913000 17575000 26297000 35212000 39099000 25012000 27847000 0 33256 3670 30376 279370;279371;279372;279373;279374;279375;279376;279377;279378;279379 221295;221296;221297;221298;221299;221300;221301;221302 221299 8 LTPYEVDELRR Unmodified 1389.7252 0.72522871 3670 Q92841 DDX17 Probable ATP-dependent RNA helicase DDX17 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.348 55.478 3 0.0010363 62124 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 64.439 48.301 345690000 0 0 0 19015000 18723000 14613000 29120000 23251000 17049000 32683000 40567000 46171000 31856000 30316000 42327000 33257 3670 30377 279380;279381;279382;279383;279384;279385;279386;279387;279388;279389;279390;279391 221303;221304;221305;221306;221307;221308;221309;221310;221311;221312;221313 221311 10 LTPYEVDELRRK Unmodified 1517.8202 0.82019173 3670 Q92841 DDX17 Probable ATP-dependent RNA helicase DDX17 yes yes 0 0 2 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.526 47.689 4 0.016561 53791 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 42.095 27.742 169500000 0 0 0 4591800 2310500 17490000 5768900 9035300 14731000 16255000 10380000 18571000 18875000 19282000 32213000 33258 3670 30378 279392;279393;279394;279395;279396;279397;279398;279399;279400;279401;279402;279403 221314;221315;221316;221317;221318 221317 5 LTQAEISEQPTMATVVPQVPTSPK Oxidation (M) 2567.3153 0.31526907 3025 Q70E73 RAPH1 Ras-associated and pleckstrin homology domains-containing protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 74.677 74.714 3 5.0524E-22 86221 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 88.239 78.484 146000000 0 0 0 10732000 14012000 15143000 15576000 12044000 9013500 13995000 15830000 16431000 9608800 13616000 0 33259 3025 30379 279404;279405;279406;279407;279408;279409;279410;279411;279412;279413;279414 221319;221320;221321;221322;221323;221324;221325;221326;221327;221328;221329;221330;221331;221332 221321 4639 14 LTQAEISEQPTMATVVPQVPTSPK Unmodified 2551.3204 0.32035445 3025 Q70E73 RAPH1 Ras-associated and pleckstrin homology domains-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 80.486 80.583 3 1.3268E-09 92941 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.241 38.985 43328000 0 0 0 0 3624300 4643200 2476200 5632700 3444500 0 3899500 0 3187100 5257400 11163000 33260 3025 30379 279415;279416;279417;279418;279419;279420;279421;279422;279423 221333;221334;221335;221336;221337;221338;221339;221340;221341;221342;221343 221335 11 LTQAIAETPENDIPETEVEDDEGWMSHVLQFEDK Unmodified 3914.768 0.7680239 2982 Q6UX04 CWC27 Peptidyl-prolyl cis-trans isomerase CWC27 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 97.399 89.268 3 2.5755E-70 115272 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 109.65 105.54 26105000 26105000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33261 2982 30380 279424 221344 221344 1 LTQAQIFDYGEIPNFPR Unmodified 2008.0054 0.005426314 728 P00491 PNP Purine nucleoside phosphorylase yes yes 0 0 0 By MS/MS 10 0 1 1 89.656 89.8 2 1.5183E-22 103977 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.29 96.865 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33262 728 30381 279425 221345 221345 1 LTQDAVAK Unmodified 844.46543 0.46543219 5076 Q9Y224 C14orf166 UPF0568 protein C14orf166 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.13 12.278 2 0.009506 10582 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 82.671 25.569 310620000 0 0 0 18770000 17363000 22958000 19277000 17326000 15516000 33563000 31420000 39810000 22471000 17027000 55119000 33263 5076 30382 279426;279427;279428;279429;279430;279431;279432;279433;279434;279435;279436;279437 221346;221347;221348;221349;221350;221351;221352;221353;221354 221349 5 LTQDEIISK Unmodified 1045.5655 0.56554017 2143 Q07866 KLC1 Kinesin light chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37.21 36.528 2 0.0052721 39276 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 78.264 26.928 654190000 12328000 337420000 0 17499000 20059000 26524000 18921000 22333000 17618000 24060000 30820000 30642000 31216000 23235000 41509000 33264 2143 30383 279438;279439;279440;279441;279442;279443;279444;279445;279446;279447;279448;279449;279450;279451 221355;221356;221357;221358;221359;221360;221361;221362 221360 7 LTQDLFGTGGNTTGK Unmodified 1508.7471 0.74708636 2935 Q6P4R8 NFRKB Nuclear factor related to kappa-B-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 56.519 56.055 2 0.00049842 71433 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.245 70.375 64136000 0 33973000 0 0 0 2907700 4138300 0 0 4874400 4094500 5925900 3092400 0 5129500 33265 2935 30384 279452;279453;279454;279455;279456;279457;279458;279459;279460 221363;221364;221365;221366;221367;221368;221369;221370 221365 8 LTQDQDVDVK Unmodified 1159.5721 0.57208211 1271 P30153 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.34 1 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23.197 22.862 2 0.00046371 23194 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 135.79 91.344 1472400000 0 130410000 5456700 57189000 59322000 95988000 62562000 58453000 42941000 150030000 137060000 172740000 123620000 144640000 232030000 33266 1271 30385 279461;279462;279463;279464;279465;279466;279467;279468;279469;279470;279471;279472;279473;279474;279475 221371;221372;221373;221374;221375;221376;221377;221378;221379;221380;221381;221382;221383;221384;221385 221375 14 LTQECGEDLSK Unmodified 1278.5762 0.57618121 4683 Q9NVU0 POLR3E DNA-directed RNA polymerase III subunit RPC5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.312 22.516 2 0.0045535 23516 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 70.389 42.647 57810000 0 0 0 3053200 2689500 4605100 3250600 3524300 3656600 4498800 5452700 8038300 7317400 4918200 6805300 33267 4683 30386 279476;279477;279478;279479;279480;279481;279482;279483;279484;279485;279486;279487 221386;221387;221388;221389;221390;221391;221392;221393;221394 221392 5 LTQEETNFK Unmodified 1108.5401 0.5400537 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 26.562 25.936 2 3.4069E-20 27874 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 174.27 118.15 702450000 0 440780000 3796200 11216000 17899000 25157000 20647000 14333000 15845000 21875000 23126000 29926000 19566000 22497000 35783000 33268 4634 30387 279488;279489;279490;279491;279492;279493;279494;279495;279496;279497;279498;279499;279500;279501;279502 221395;221396;221397;221398;221399;221400;221401;221402;221403;221404;221405;221406;221407;221408;221409;221410;221411 221402 17 LTQEHIEALLDK Unmodified 1408.7562 0.75619449 1011 P15056 BRAF Serine/threonine-protein kinase B-raf yes yes 0 0 0 By MS/MS 2 0 1 1 69.463 65.783 2 0.022445 81276 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 65.842 51.635 2480600 0 0 2480600 0 0 0 0 0 0 0 0 0 0 0 0 33269 1011 30388 279503 221412 221412 1 LTQELAQK Unmodified 929.5182 0.51819605 3243 Q8IWR0 ZC3H7A Zinc finger CCCH domain-containing protein 7A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 18.976 19.135 2 0.0066594 19478 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 98.997 54.304 82498000 0 0 0 5233600 4795800 6281800 6482600 6331800 5359700 9250700 8021400 0 8556300 7688100 14497000 33270 3243 30389 279504;279505;279506;279507;279508;279509;279510;279511;279512;279513;279514 221413;221414;221415;221416;221417;221418;221419;221420;221421;221422;221423 221414 11 LTQEPESIRK Unmodified 1199.651 0.65100113 886 P09497 CLTB Clathrin light chain B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 18.812 18.931 3 0.0038223 19513 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 53.47 35.333 151230000 0 0 0 11749000 12370000 13628000 14292000 10390000 11365000 16890000 26589000 0 12347000 21612000 0 33271 886 30390 279515;279516;279517;279518;279519;279520;279521;279522;279523;279524 221424;221425;221426 221424 2 LTQEVLLLR Unmodified 1083.6652 0.66519463 2817 Q5VU43 PDE4DIP Myomegalin yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 74.768 74.792 2 0.021188 86341 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 52.482 28.527 28331000 0 0 0 1695500 2252500 3555900 1917800 2264300 0 4541300 4093800 0 1912900 0 6097000 33272 2817 30391 279525;279526;279527;279528;279529;279530;279531;279532;279533 221427;221428;221429;221430;221431 221427 5 LTQGETLR Unmodified 916.49779 0.49779495 2527 Q15392 DHCR24 Delta(24)-sterol reductase yes yes 0 0 0 By MS/MS 10 0 1 1 26.309 25.941 2 0.043986 27869 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 49.058 4.2914 3860100 0 0 0 0 3860100 0 0 0 0 0 0 0 0 0 0 33273 2527 30392 279534 221432 221432 1 LTQIIQQK Unmodified 970.58113 0.58113065 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.457 32.641 2 0.0045978 35624 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 130.04 65.516 453150000 0 0 0 30945000 30568000 29935000 38139000 36677000 26279000 34506000 48618000 55567000 43432000 31346000 47140000 33274 2556 30393 279535;279536;279537;279538;279539;279540;279541;279542;279543;279544;279545;279546 221433;221434;221435;221436;221437;221438;221439;221440;221441 221435 5 LTQILSYLR Unmodified 1105.6495 0.64954457 2236 Q13123 IK Protein Red yes yes 0 0 0 By matching By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 81.507 81.653 2 0.022576 94113 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.415 20.803 14319000 0 0 0 0 0 0 0 0 1861100 3460300 0 2311100 1499700 0 5187200 33275 2236 30394 279547;279548;279549;279550;279551 221442 221442 1 LTQIQESQVTSHNK Unmodified 1611.8216 0.82164829 3618 Q92541 RTF1 RNA polymerase-associated protein RTF1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.84 3.47 5 2 18 1 4 2 1 1 2 2 1 1 2 2 2 1 1 2 29.064 28.011 2;3 2.1289E-34 36645 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.24 112.44 505820000 31826000 170930000 16817000 11626000 14265000 36148000 20879000 19678000 20245000 26304000 24424000 31977000 20881000 21118000 38699000 33276 3618 30395 279552;279553;279554;279555;279556;279557;279558;279559;279560;279561;279562;279563;279564;279565;279566;279567;279568;279569;279570;279571;279572;279573;279574;279575;279576 221443;221444;221445;221446;221447;221448;221449;221450;221451;221452;221453;221454;221455;221456;221457;221458;221459;221460;221461;221462;221463;221464;221465;221466 221447 22 LTQLASGHSHGTFEWVDSMLVQALK Unmodified 2754.3799 0.37993501 4641 Q9NU22 MDN1 Midasin yes yes 0 0 0 By MS/MS 10 0 1 1 66.862 66.999 3 0.022732 77080 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 18.881 11.347 17366000 0 0 0 0 0 0 0 0 0 0 0 0 17366000 0 0 33277 4641 30396 279577 221467 221467 1 LTQNVDLLGLLK Unmodified 1325.7919 0.79185171 2386 Q14185 DOCK1 Dedicator of cytokinesis protein 1 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 93.76 91.419 2 0.0071599 113813 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.882 52.925 12361000 0 11236000 0 0 0 0 0 0 0 0 0 0 0 0 1124600 33278 2386 30397 279578;279579 221468;221469 221468 2 LTQQLEEER Unmodified 1144.5724 0.57241646 6 A0MZ66 KIAA1598 Shootin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 26.719 26.528 2 0.0043879 28667 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 114.89 70.447 9740200 0 0 0 2930200 2931700 0 3878300 0 0 0 0 0 0 0 0 33279 6 30398 279580;279581;279582 221470;221471 221471 2 LTQQLEEERIQHQQK Unmodified 1906.9861 0.98608786 6 A0MZ66 KIAA1598 Shootin-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 6 21 2 2 2 2 2 2 2 2 2 2 2 1 1 2 1 30.762 29.788 3;4 0.0001575 40259 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.297 74.782 717940000 370970000 63661000 72257000 13155000 8216900 19547000 17182000 16292000 12540000 21821000 24679000 11604000 17075000 23595000 25351000 33280 6 30399 279583;279584;279585;279586;279587;279588;279589;279590;279591;279592;279593;279594;279595;279596;279597;279598;279599;279600;279601;279602;279603;279604;279605;279606;279607;279608;279609 221472;221473;221474;221475;221476;221477;221478;221479;221480;221481;221482;221483;221484;221485;221486;221487;221488;221489 221475 16 LTQQLEFEK Unmodified 1134.5921 0.59208927 4812 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 48.817 49.13 2 0.0086707 55489 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 68.95 29.031 94713000 0 0 0 0 0 14338000 0 13463000 11181000 0 17796000 18247000 19688000 0 0 33281 4812 30400 279610;279611;279612;279613;279614;279615;279616 221490;221491;221492;221493;221494;221495;221496;221497;221498 221494 9 LTQQLIEFEK Unmodified 1247.6762 0.67615325 2993 Q6XZF7 DNMBP Dynamin-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 70.158 69.847 2 6.5082E-05 79758 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 143.86 94.048 195340000 0 98032000 0 4613600 5189000 9497800 6679200 7035600 6356400 9028700 9789100 9855700 7909300 8635900 12721000 33282 2993 30401 279617;279618;279619;279620;279621;279622;279623;279624;279625;279626;279627;279628;279629 221499;221500;221501;221502;221503;221504;221505;221506;221507;221508;221509;221510;221511;221512;221513;221514;221515;221516;221517 221506 19 LTQQMIK Oxidation (M) 876.47389 0.47388839 455 O75116 ROCK2 Rho-associated protein kinase 2 yes yes 0 1 0 By MS/MS By MS/MS 2.67 0.471 1 2 1 2 15.273 11.635 2 0.019632 15501 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.76 58.587 58778000 292500 58486000 0 0 0 0 0 0 0 0 0 0 0 0 0 33283 455 30402 279630;279631;279632 221518;221519 221518 577 2 LTQSLDSDKPMEPVK Oxidation (M) 1702.8448 0.8447515 3025 Q70E73 RAPH1 Ras-associated and pleckstrin homology domains-containing protein 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.31 3.1 1 2 10 3 1 1 1 1 1 1 1 1 1 1 35.97 34.971 2;3 3.3952E-08 45400 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.85 93.156 154280000 0 25224000 0 11973000 7583200 18399000 9326100 8633700 12114000 0 15204000 13591000 22430000 9799800 0 33284 3025 30403 279633;279634;279635;279636;279637;279638;279639;279640;279641;279642;279643;279644;279645 221520;221521;221522;221523;221524;221525;221526 221521 4640 6 LTQSLDSDKPMEPVK Unmodified 1686.8498 0.84983687 3025 Q70E73 RAPH1 Ras-associated and pleckstrin homology domains-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.24 2 1 10 3 1 1 1 1 1 1 1 1 1 1 44.619 43.475 2;3 1.6878E-14 56759 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.95 99.256 269180000 0 131930000 0 9057000 8205900 15764000 9966700 10722000 13588000 12920000 0 17206000 0 13420000 26398000 33285 3025 30403 279646;279647;279648;279649;279650;279651;279652;279653;279654;279655;279656;279657;279658 221527;221528;221529;221530;221531;221532;221533;221534;221535 221531 8 LTQTSGETTHTDK Unmodified 1417.6685 0.66850169 1492 P46013 MKI67 Antigen KI-67 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 1 2 2 2 2 1 2 6.5137 6.641 2;3 3.1639E-09 4002 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 111.79 106.31 118800000 0 0 0 6626100 6825400 2684400 833000 6674200 3141000 16618000 18170000 18017000 14501000 1962300 22749000 33286 1492 30404 279659;279660;279661;279662;279663;279664;279665;279666;279667;279668;279669;279670;279671;279672;279673;279674;279675;279676;279677;279678;279679;279680 221536;221537;221538;221539;221540;221541;221542;221543;221544;221545 221539 9 LTQTSGETTHTHTEPTGDGK Unmodified 2096.9611 0.9610549 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.04 2.54 2 1 21 2 1 2 1 2 2 2 2 2 1 1 2 2 2 11.112 10.849 3;4 8.532E-07 6374 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 54.658 49.119 255440000 0 64985000 8390600 13819000 3549200 16715000 20236000 12374000 8493400 12963000 17655000 11245000 17503000 15239000 32272000 33287 1492 30405 279681;279682;279683;279684;279685;279686;279687;279688;279689;279690;279691;279692;279693;279694;279695;279696;279697;279698;279699;279700;279701;279702;279703;279704 221546;221547;221548;221549;221550;221551;221552;221553;221554;221555;221556 221551 8 LTQTSSTEQLNVLETETEVLNK Unmodified 2476.2544 0.25444295 2734 Q5JSH3 WDR44 WD repeat-containing protein 44 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.25 3.77 2 2 4 4 1 1 1 1 86.231 84.293 2;3 4.1892E-09 104584 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.452 56.436 834190000 0 797670000 0 0 0 0 0 0 0 8145500 7123700 8713000 0 0 12545000 33288 2734 30406 279705;279706;279707;279708;279709;279710;279711;279712 221557;221558;221559;221560;221561;221562 221559 5 LTQVLNTHYVAPR Unmodified 1510.8256 0.82561145 1656;1655 P51532;P51531 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 53.968 54.105 3 0.00056917 61394 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 54.898 41.181 407440000 0 0 0 21949000 32661000 41232000 22793000 26122000 33318000 46661000 33126000 35366000 30565000 32153000 51492000 33289 1656;1655 30407 279713;279714;279715;279716;279717;279718;279719;279720;279721;279722;279723;279724 221563;221564;221565;221566;221567;221568;221569;221570;221571;221572;221573;221574;221575;221576 221569 14 LTQYHGGSLPNVSQLR Unmodified 1768.922 0.92203104 2975 Q6UUV7 CRTC3 CREB-regulated transcription coactivator 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 63.007 63.174 3 0.00023185 72137 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 65.175 58.342 380380000 0 0 0 0 17143000 23561000 30239000 27666000 0 50107000 51386000 43656000 28723000 36018000 71880000 33290 2975 30408 279725;279726;279727;279728;279729;279730;279731;279732;279733;279734;279735 221577;221578;221579;221580;221581;221582;221583;221584;221585;221586;221587;221588;221589 221583 13 LTQYIDGQGRPR Unmodified 1402.7317 0.73171107 2315 Q13555;Q13554 CAMK2G;CAMK2B Calcium/calmodulin-dependent protein kinase type II subunit gamma;Calcium/calmodulin-dependent protein kinase type II subunit beta yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.103 32.29 3 1.6901E-05 35187 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 93.345 72.286 221290000 0 0 0 14758000 12868000 20464000 16996000 16335000 14397000 18476000 24645000 25990000 18322000 14885000 23156000 33291 2315 30409 279736;279737;279738;279739;279740;279741;279742;279743;279744;279745;279746;279747 221590;221591;221592;221593;221594;221595;221596;221597;221598;221599;221600;221601;221602 221597 13 LTRDAQSPDESK Unmodified 1345.6474 0.64737232 2647 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 2 3 2 8.6694 5.5643 2;3 0.003564 7421 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 81.494 81.494 238450000 29958000 197590000 10902000 0 0 0 0 0 0 0 0 0 0 0 0 33292 2647 30410 279748;279749;279750;279751;279752;279753;279754 221603;221604;221605;221606 221605 2 LTRDETNYGIPQR Unmodified 1561.7849 0.78486885 1950 P63244 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 37.879 38.008 3 0.0007589 40892 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.333 38.098 158360000 0 0 0 23949000 2873400 2193200 3606000 20428000 0 6798200 24292000 0 7629900 16728000 49863000 33293 1950 30411 279755;279756;279757;279758;279759;279760;279761;279762;279763;279764 221607;221608;221609;221610;221611 221607 4 LTRQESCLGNSPPFEK Unmodified 1861.8992 0.89924668 3179 Q86W56 PARG Poly(ADP-ribose) glycohydrolase yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 53.622 47.588 3 0.00019614 65300 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.157 74.775 40550000 38702000 0 1848100 0 0 0 0 0 0 0 0 0 0 0 0 33294 3179 30412 279765;279766 221612 221612 1 LTRTSGETTQTHTEPTGDSK Unmodified 2146.0138 0.013818748 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 1 By MS/MS By MS/MS 2 0 4 2 2 13.74 10.575 3;4 5.48E-47 15639 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 113.54 100.12 49258000 32666000 0 16593000 0 0 0 0 0 0 0 0 0 0 0 0 33295 1492 30413 279767;279768;279769;279770 221613;221614;221615;221616;221617 221615 5 LTSADALRPSVVSITGPLIR Unmodified 2065.1895 0.18953869 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 85.174 85.309 3 2.5049E-12 98513 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.499 76.311 23168000 0 0 0 0 0 0 0 0 0 4978700 0 0 0 0 18189000 33296 3641 30414 279771;279772 221618;221619 221619 2 LTSALNR Unmodified 773.43955 0.43955179 2975 Q6UUV7 CRTC3 CREB-regulated transcription coactivator 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.516 18.71 2 0.031628 19025 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 126.16 36.453 252030000 0 0 0 16036000 8617500 16169000 22027000 16345000 15239000 25179000 24714000 29768000 22387000 18430000 37118000 33297 2975 30415 279773;279774;279775;279776;279777;279778;279779;279780;279781;279782;279783;279784 221620;221621 221621 0 LTSAVSSLPELLEK Unmodified 1485.829 0.82902508 3564 Q8WVM8 SCFD1 Sec1 family domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 86.184 85.067 2 1.2652E-07 98724 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 113.22 88.759 343460000 10251000 241430000 3379700 3451500 4537400 7890300 5379900 7881400 3722800 12061000 7851600 11332000 5554800 5957100 12786000 33298 3564 30416 279785;279786;279787;279788;279789;279790;279791;279792;279793;279794;279795;279796;279797;279798;279799;279800 221622;221623;221624;221625;221626;221627;221628;221629;221630;221631;221632;221633;221634 221629 13 LTSDEEGEPSGK Unmodified 1247.5517 0.5517406 3560 Q8WVC0 LEO1 RNA polymerase-associated protein LEO1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 2 1 1 1 1 1 1 1 1 1 1 1 11.326 11.451 2 0.0011306 10118 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 81.865 75.415 80515000 0 0 0 2030100 2379500 7990700 2749300 2447800 6228100 5899200 4939900 13305000 10823000 10103000 11619000 33299 3560 30417 279801;279802;279803;279804;279805;279806;279807;279808;279809;279810;279811;279812;279813 221635;221636;221637;221638;221639;221640;221641;221642;221643;221644;221645;221646 221644 11 LTSDIQGHASHQPAISEK Unmodified 1917.9545 0.95445338 142 O00311 CDC7 Cell division cycle 7-related protein kinase yes yes 0 0 0 By MS/MS By MS/MS 2 0 4 2 2 36.213 31.292 3;4 3.3194E-05 43459 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.449 72.35 82213000 61158000 0 21054000 0 0 0 0 0 0 0 0 0 0 0 0 33300 142 30418 279814;279815;279816;279817 221647;221648;221649 221647 2 LTSDPTDIPVVCLESDNGNIMIQK Oxidation (M) 2674.283 0.28298266 337 O43504 LAMTOR5 Ragulator complex protein LAMTOR5 yes yes 0 1 0 By MS/MS 2 0 1 1 88.328 83.486 2 4.7427E-47 103836 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.73 114.78 21593000 0 21593000 0 0 0 0 0 0 0 0 0 0 0 0 0 33301 337 30419 279818 221650 221650 424 1 LTSDPTDIPVVCLESDNGNIMIQK Unmodified 2658.2881 0.28806804 337 O43504 LAMTOR5 Ragulator complex protein LAMTOR5 yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 90.633 86.401 3 6.4366E-123 107377 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.58 116.59 147530000 1203300 146330000 0 0 0 0 0 0 0 0 0 0 0 0 0 33302 337 30419 279819;279820 221651;221652 221652 2 LTSEIQSR Unmodified 932.49271 0.49270958 2465 Q14CX7 NAA25 N-alpha-acetyltransferase 25, NatB auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 17.739 18.001 2 0.0050168 18059 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 108.46 53.674 1665100000 0 0 0 0 0 5186100 457130000 561380000 517190000 27238000 26772000 55133000 2625800 3065700 9409500 33303 2465 30420 279821;279822;279823;279824;279825;279826;279827;279828;279829;279830 221653;221654;221655;221656;221657;221658;221659;221660;221661 221659 9 LTSEIQSRENK Unmodified 1303.6732 0.67319314 2465 Q14CX7 NAA25 N-alpha-acetyltransferase 25, NatB auxiliary subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 17.853 14.337 3 0.0001539 18782 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.283 83.667 157020000 14206000 68040000 74771000 0 0 0 0 0 0 0 0 0 0 0 0 33304 2465 30421 279831;279832;279833;279834 221662;221663;221664;221665;221666;221667;221668;221669 221662 6 LTSELLGEGAYAK Unmodified 1350.7031 0.70309628 4159 Q9BUB5 MKNK1 MAP kinase-interacting serine/threonine-protein kinase 1 yes yes 0 0 0 By MS/MS 2 0 1 1 68.443 62.543 2 0.030302 79570 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.056 42.343 59133000 0 59133000 0 0 0 0 0 0 0 0 0 0 0 0 0 33305 4159 30422 279835 221670 221670 1 LTSEPQPQR Unmodified 1054.5407 0.5407224 1834 P61106 RAB14 Ras-related protein Rab-14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 14.343 14.505 2 1.4037E-05 13790 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 153.73 97.604 1108300000 0 0 0 76081000 69454000 76403000 63590000 94965000 0 114420000 150580000 132100000 108310000 83978000 138400000 33306 1834 30423 279836;279837;279838;279839;279840;279841;279842;279843;279844;279845;279846 221671;221672;221673;221674;221675;221676;221677;221678 221674 7 LTSESTNQR Unmodified 1034.4993 0.49925152 3125 Q7Z7H5 TMED4 Transmembrane emp24 domain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 6.3358 6.449 2 0.0051747 4304 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 81.296 51.111 26130000 0 0 0 1730100 2340800 2941200 5662100 3748000 2314300 1526600 2098800 0 1647500 0 2120900 33307 3125 30424 279847;279848;279849;279850;279851;279852;279853;279854;279855;279856 221679;221680;221681;221682;221683 221683 5 LTSFIGAIAIGDLVK Unmodified 1516.8865 0.88648038 1980 P78371 CCT2 T-complex protein 1 subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 96.766 96.92 2 2.3239E-06 112515 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.169 70.476 12541000 0 0 0 0 0 0 0 0 0 3087500 2661600 0 0 0 6791600 33308 1980 30425 279857;279858;279859 221684;221685;221686 221685 3 LTSFITVFK Unmodified 1054.6063 0.60628277 2329 Q13617 CUL2 Cullin-2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 84.13 84.242 2 0.0075125 97688 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 72.23 18.262 19182000 0 0 0 0 0 6412000 0 0 0 2879800 0 2554400 0 1326600 6009300 33309 2329 30426 279860;279861;279862;279863;279864 221687;221688;221689 221687 3 LTSHQSQNLQQPR Unmodified 1535.7805 0.78045218 2942 Q6PCD5 RFWD3 E3 ubiquitin-protein ligase RFWD3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.266 15.437 3 2.2569E-08 14982 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 85.554 53.486 54673000 0 0 0 2033400 1962900 2516100 3798200 2509200 1779000 3212500 7097900 8992300 6181800 4611000 9978300 33310 2942 30427 279865;279866;279867;279868;279869;279870;279871;279872;279873;279874;279875;279876 221690;221691;221692;221693;221694;221695;221696 221696 6 LTSKNEPLLK Unmodified 1141.6707 0.67067394 2435 Q14689 DIP2A Disco-interacting protein 2 homolog A yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 75.767 71.57 2 0.035236 89285 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.743 33.684 57460000 0 57460000 0 0 0 0 0 0 0 0 0 0 0 0 0 33311 2435 30428 279877;279878 221697 221697 1 LTSLAALR Unmodified 843.5178 0.51780212 4580 Q9NQX4 MYO5C Unconventional myosin-Vc yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 53.839 53.906 2 0.044838 61415 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 48.756 8.183 83247000 0 0 0 4774100 6270200 11009000 6064500 6870700 9746000 0 12847000 17870000 0 7795900 0 33312 4580 30429 279879;279880;279881;279882;279883;279884;279885;279886;279887 221698 221698 1 LTSLGVIGALVK Unmodified 1169.7384 0.73835958 3635 Q92600 RQCD1 Cell differentiation protein RCD1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 88.682 88.753 2 0.00081093 102978 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 74.173 36.012 33300000 0 0 0 543710 1225300 1617300 1332300 2486400 1983200 5695900 2278800 3388200 1465200 2242000 9041200 33313 3635 30430 279888;279889;279890;279891;279892;279893;279894;279895;279896;279897;279898;279899 221699;221700;221701;221702;221703;221704;221705 221701 7 LTSLNEEYTK Unmodified 1196.5925 0.5924832 1474 P43246 MSH2 DNA mismatch repair protein Msh2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.62 2.87 1 2 13 1 2 1 1 1 1 2 1 1 1 1 1 1 1 38.549 37.748 2 0.00042258 40982 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 137.13 114.39 1077600000 722220 582990000 0 23831000 25237000 45567000 35692000 38105000 22371000 42795000 50947000 63819000 37882000 34757000 72865000 33314 1474 30431 279900;279901;279902;279903;279904;279905;279906;279907;279908;279909;279910;279911;279912;279913;279914;279915 221706;221707;221708;221709;221710;221711;221712;221713;221714;221715;221716;221717;221718;221719 221715 12 LTSLNVK Unmodified 773.4647 0.46470391 1208;687 O95758;P26599 PTBP3;PTBP1 Polypyrimidine tract-binding protein 3;Polypyrimidine tract-binding protein 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 4.83 3.67 3 1 2 2 2 1 1 32.669 30.216 2 0.025135 31807 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.381 14.388 5690700000 725320000 4251800000 0 0 0 0 0 0 0 0 0 0 0 238900000 474670000 33315 687;1208 30432 279916;279917;279918;279919;279920;279921 221720;221721;221722;221723 221721 3 LTSLVPFVDAFQLER Unmodified 1733.9352 0.93522148 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 0 By MS/MS 10 0 1 1 97.279 97.442 2 0.015083 113106 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.084 29.422 2311100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2311100 33316 2378 30433 279922 221724 221724 1 LTSMHFYGWK Oxidation (M) 1284.5961 0.59612879 1171 P23921 RRM1 Ribonucleoside-diphosphate reductase large subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 50.816 50.854 3 0.0038108 57644 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 51.276 41.044 214880000 0 0 0 22445000 15808000 43915000 0 18549000 20801000 31466000 0 0 0 20064000 41828000 33317 1171 30434 279923;279924;279925;279926;279927;279928;279929;279930 221725;221726;221727 221726 1693 3 LTSMHFYGWK Unmodified 1268.6012 0.60121417 1171 P23921 RRM1 Ribonucleoside-diphosphate reductase large subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 2 1 1 1 1 1 1 1 2 2 68.004 68.219 2;3 0.0018217 77477 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.034 84.186 134790000 0 0 0 0 0 18034000 2409200 8758700 6089200 6373200 6613000 9016200 6082500 11272000 60140000 33318 1171 30434 279931;279932;279933;279934;279935;279936;279937;279938;279939;279940;279941;279942;279943 221728;221729;221730;221731 221729 4 LTSNPLASHDYILK Unmodified 1570.8355 0.83550744 3729 Q969X5 ERGIC1 Endoplasmic reticulum-Golgi intermediate compartment protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.916 68.995 3 0.0020531 79157 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 39.005 19.264 106160000 0 0 0 5863500 3327400 9748600 6168800 7949500 6226700 9696900 10332000 13127000 8509400 9666900 15544000 33319 3729 30435 279944;279945;279946;279947;279948;279949;279950;279951;279952;279953;279954;279955 221732;221733;221734;221735;221736;221737;221738;221739;221740;221741 221735 10 LTSPGALLFQ Unmodified 1045.5808 0.5807963 413 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 3 9 1 1 1 1 1 1 1 1 1 1 1 1 88.881 87.668 2 0.003489 107574 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.662 68.723 214330000 11177000 130930000 1394300 0 2741100 0 4426600 4962400 0 14118000 7221500 5867900 6127800 6813300 18551000 33320 413 30436 279956;279957;279958;279959;279960;279961;279962;279963;279964;279965;279966;279967 221742;221743;221744;221745;221746 221744 5 LTSPVTSISPIQASEK Unmodified 1656.8934 0.89341625 3105 Q7Z589 EMSY Protein EMSY yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By matching 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 72.095 71.768 2 0.0054142 82625 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 43.382 27.493 66218000 0 31558000 0 0 2107000 2647000 2361700 2026100 0 4170600 4051400 4533200 3885200 4238800 4639400 33321 3105 30437 279968;279969;279970;279971;279972;279973;279974;279975;279976;279977;279978 221747;221748;221749 221748 3 LTSQAHSSNTVER Unmodified 1428.6957 0.69571949 5048 Q9UPM8 AP4E1 AP-4 complex subunit epsilon-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 7.7509 7.8997 3 0.0029527 5907 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 41.092 18.86 35004000 0 0 0 0 1441100 2441300 2171900 2558400 0 3284600 6925000 4829300 2544000 3363600 5444600 33322 5048 30438 279979;279980;279981;279982;279983;279984;279985;279986;279987;279988 221750;221751;221752 221752 3 LTSSLPDVEALR Unmodified 1299.7034 0.70343063 2725 Q5GLZ8 HERC4 Probable E3 ubiquitin-protein ligase HERC4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.323 75.382 2 2.0568E-05 86997 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 104.22 76.209 96875000 0 0 0 3370600 4305900 12603000 7292600 6066100 2894000 10784000 9793600 12233000 5968100 8627300 12936000 33323 2725 30439 279989;279990;279991;279992;279993;279994;279995;279996;279997;279998;279999;280000 221753;221754;221755;221756;221757;221758;221759;221760 221753 8 LTSSNEINK Unmodified 1004.5138 0.51383895 5050 Q9UPN6 SCAF8 Protein SCAF8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 12.697 12.34 2 0.001193 14578 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.41 85.715 317490000 0 57191000 0 11935000 18630000 18364000 21312000 19060000 21135000 27125000 22718000 29177000 25471000 23235000 22135000 33324 5050 30440 280001;280002;280003;280004;280005;280006;280007;280008;280009;280010;280011;280012;280013;280014 221761;221762;221763;221764;221765;221766;221767;221768;221769;221770 221764 7 LTSSVQAFSK Unmodified 1066.5659 0.56587452 4859 Q9UBT7 CTNNAL1 Alpha-catulin yes yes 0 0 0 By MS/MS 2 0 1 1 45.146 38.281 2 0.0074219 52546 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.231 46.836 19096000 19096000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33325 4859 30441 280015 221771 221771 1 LTSSVSCALDEAAAALTR Unmodified 1834.9095 0.90947702 472;3250 Q8IWZ3;O75179 ANKHD1;ANKRD17 Ankyrin repeat and KH domain-containing protein 1;Ankyrin repeat domain-containing protein 17 no no 0 0 0 By MS/MS 10 0 1 1 92.306 92.444 3 0.0079752 107169 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 21.353 18.967 1925400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1925400 33326 3250;472 30442 280016 221772 221772 1 LTSTPREIAK Unmodified 1114.6346 0.63462279 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 26.612 21.816 2 0.014337 31111 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.88 61.786 31499000 23986000 7513100 0 0 0 0 0 0 0 0 0 0 0 0 0 33327 5262 30443 280017;280018 221773 221773 0 LTSTSAITR Unmodified 948.52401 0.52400971 2988 Q6VY07 PACS1 Phosphofurin acidic cluster sorting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 23.189 23.285 2 0.011172 24380 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 63.216 49.059 39224000 0 0 0 6785300 0 0 9323600 5824100 6480000 0 0 0 10811000 0 0 33328 2988 30444 280019;280020;280021;280022;280023 221774 221774 1 LTSTSAITRQPNIK Unmodified 1528.8573 0.85730551 2988 Q6VY07 PACS1 Phosphofurin acidic cluster sorting protein 1 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 38.59 38.775 3 0.0024251 43019 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 47.774 33.81 28890000 0 0 0 0 0 3386100 5082700 3359500 3017400 4562600 5497800 0 0 3983800 0 33329 2988 30445 280024;280025;280026;280027;280028;280029;280030 221775;221776;221777 221775 3 LTSVQIK Unmodified 787.48035 0.48035398 2676 Q3V6T2 CCDC88A Girdin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.464 30.653 2 0.045927 33380 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 66.138 18.023 49478000 0 0 0 2497000 2589000 3726700 2819900 2921100 2112500 4312600 5359800 7979900 5895700 3223700 6040100 33330 2676 30446 280031;280032;280033;280034;280035;280036;280037;280038;280039;280040;280041;280042 221778 221778 1 LTSVVMEK Oxidation (M) 921.48412 0.48411873 2226 Q13042 CDC16 Cell division cycle protein 16 homolog yes yes 0 1 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 22.924 23.134 2 0.0076641 24093 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 76.478 39.384 76595000 0 0 0 4918600 4159200 5774400 5268200 0 3996300 8347600 6513200 10236000 10174000 7975400 9231600 33331 2226 30447 280043;280044;280045;280046;280047;280048;280049;280050;280051;280052;280053 221779;221780;221781;221782;221783;221784;221785 221785 3616 6 LTSVVMEK Unmodified 905.4892 0.4892041 2226 Q13042 CDC16 Cell division cycle protein 16 homolog yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35.566 34.885 2 0.011957 38542 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 75.738 46.4 253480000 7284600 116710000 0 4186900 4778000 9195500 5231500 6351900 7829200 9596000 13534000 13701000 15981000 10957000 28146000 33332 2226 30447 280054;280055;280056;280057;280058;280059;280060;280061;280062;280063;280064;280065;280066;280067 221786;221787;221788;221789;221790;221791;221792;221793;221794 221788 9 LTSVVTPRPFGSQTR Unmodified 1644.8948 0.89475365 3573 Q8WWI1 LMO7 LIM domain only protein 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.834 55.96 3 0.00019382 63063 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 52.823 37.431 391240000 0 0 0 25083000 21738000 31181000 34735000 28529000 24331000 34287000 36428000 54593000 25745000 24726000 49867000 33333 3573 30448 280068;280069;280070;280071;280072;280073;280074;280075;280076;280077;280078;280079 221795;221796;221797;221798;221799;221800;221801;221802;221803;221804;221805 221799 10 LTTAMCNEVASLSK Unmodified 1523.7324 0.73236428 3239 Q8IWE2 FAM114A1 Protein NOXP20 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 66.076 65.607 2 3.8885E-18 83510 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.68 107.38 249720000 0 195780000 0 0 0 0 2586100 0 3886200 0 5218700 14416000 9203600 6201000 12437000 33334 3239 30449 280080;280081;280082;280083;280084;280085;280086;280087;280088 221806;221807;221808;221809;221810;221811;221812;221813 221807 8 LTTAMCNEVASLSK Oxidation (M) 1539.7273 0.7272789 3239 Q8IWE2 FAM114A1 Protein NOXP20 yes yes 0 1 0 By MS/MS 2 0 2 2 52.238 46.468 2 0.00075866 61734 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.273 61.214 31563000 0 31563000 0 0 0 0 0 0 0 0 0 0 0 0 0 33335 3239 30449 280089;280090 221814;221815;221816 221816 4852 3 LTTAQEVLAR Unmodified 1100.619 0.61897272 4356 Q9H211 CDT1 DNA replication factor Cdt1 yes yes 0 0 0 By MS/MS 10 0 1 1 48.46 48.521 2 0.016032 54845 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 64.485 21.266 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33336 4356 30450 280091 221817 221817 1 LTTASQTNIK Unmodified 1075.5873 0.58733824 5021 Q9UMY1 NOL7 Nucleolar protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 20.277 20.153 2 0.0004776 21137 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 128.38 90.25 468470000 0 45277000 0 26643000 28887000 28534000 34175000 27365000 28779000 46159000 47406000 48770000 36754000 29400000 40317000 33337 5021 30451 280092;280093;280094;280095;280096;280097;280098;280099;280100;280101;280102;280103;280104 221818;221819;221820;221821;221822;221823;221824;221825;221826;221827;221828;221829;221830;221831 221820 13 LTTDFGNAEK Unmodified 1094.5244 0.52440364 762 P02786 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 35.677 35.86 2 0.0098561 38970 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.032 11.543 171560000 0 0 0 10308000 10952000 12516000 14201000 11881000 9887100 13096000 19525000 26873000 15503000 10537000 16278000 33338 762 30452 280105;280106;280107;280108;280109;280110;280111;280112;280113;280114;280115;280116;280117;280118 221832;221833;221834;221835;221836;221837;221838;221839;221840 221840 8 LTTDFNVIVEALSK Unmodified 1548.8399 0.83992412 811 P05455 SSB Lupus La protein yes yes 0 0 0 By MS/MS 10 0 1 1 47.994 48.434 3 0.019294 54452 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 23.419 4.1333 8416800 0 0 0 0 0 0 0 0 0 0 8416800 0 0 0 0 33339 811 30453 280119 221841 221841 1 LTTDPDLILEVLR Unmodified 1496.845 0.84500949 3029 Q71RC2 LARP4 La-related protein 4 yes yes 0 0 0 By MS/MS 10 0 1 1 96.659 96.777 2 0.035362 112583 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 48.44 34.67 1846600 0 0 0 0 0 0 0 0 0 1846600 0 0 0 0 0 33340 3029 30454 280120 221842 221842 0 LTTEATQTPVSNK Unmodified 1388.7147 0.7147236 4233 Q9BXS6 NUSAP1 Nucleolar and spindle-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 27.789 27.633 2 1.5407E-11 29422 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 150.15 100.44 167240000 0 7935400 0 10170000 9923900 13130000 11729000 8829000 10304000 13125000 16674000 19918000 13200000 8892000 23405000 33341 4233 30455 280121;280122;280123;280124;280125;280126;280127;280128;280129;280130;280131;280132;280133 221843;221844;221845;221846;221847;221848;221849;221850;221851;221852;221853;221854;221855;221856;221857 221855 15 LTTEDLVNLGK Unmodified 1201.6554 0.65541781 1456 P42357 HAL Histidine ammonia-lyase yes yes 0 0 0 By MS/MS 10 0 1 1 74.272 73.724 2 0.018958 85598 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 43.308 32.28 2935200 0 0 0 2935200 0 0 0 0 0 0 0 0 0 0 0 33342 1456 30456 280134 221858 221858 1 LTTEEVIK Unmodified 931.52261 0.52261272 275 O15355 PPM1G Protein phosphatase 1G yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.08 3.33 2 1 9 3 1 1 1 1 1 1 1 1 1 38.369 37.802 2 0.013044 41521 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.248 9.9467 2432100000 0 1873100000 0 0 0 51975000 48652000 0 35298000 49863000 83625000 63920000 85959000 63811000 75852000 33343 275 30457 280135;280136;280137;280138;280139;280140;280141;280142;280143;280144;280145;280146 221859;221860;221861;221862;221863;221864;221865 221865 6 LTTFYGAFGPEK Unmodified 1329.6605 0.66050319 1636 P50748 KNTC1 Kinetochore-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 80.212 74.833 2 0.0028813 96465 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 99.973 67.133 143060000 133750000 0 9316500 0 0 0 0 0 0 0 0 0 0 0 0 33344 1636 30458 280147;280148 221866;221867;221868 221866 3 LTTINCEEGDK Unmodified 1278.5762 0.57618121 2627 Q16666 IFI16 Gamma-interferon-inducible protein 16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 25.191 25.393 2 0.00063756 26661 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 79.974 49.72 75888000 0 0 0 4602400 4637600 5033800 6627900 3185700 4200700 4006500 7033600 7083900 6271200 8538600 14666000 33345 2627 30459 280149;280150;280151;280152;280153;280154;280155;280156;280157;280158;280159;280160 221869;221870;221871;221872;221873;221874;221875;221876;221877;221878 221876 10 LTTLELLEVR Unmodified 1185.6969 0.69688869 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 84.521 84.688 2 0.011462 98061 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.711 37.581 34962000 0 0 0 0 0 0 0 0 2352400 5398500 9872900 0 0 0 17338000 33346 2047 30460 280161;280162;280163;280164;280165 221879;221880 221879 2 LTTPPVNTR Unmodified 997.55564 0.55564418 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 33.279 33.346 2 0.020738 36073 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 52.867 20.932 224080000 0 0 0 28574000 19036000 32776000 23513000 19564000 14399000 0 0 55203000 0 31011000 0 33347 3641 30461 280166;280167;280168;280169;280170;280171;280172;280173 221881;221882;221883;221884;221885 221884 3 LTTSDIDYALK Unmodified 1238.6394 0.63943339 1607 P49848 TAF6 Transcription initiation factor TFIID subunit 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 67.734 66.423 2 0.00039947 76101 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 86.624 68.185 126220000 0 105970000 0 0 0 0 6191200 7612800 6453600 0 0 0 0 0 0 33348 1607 30462 280174;280175;280176;280177 221886;221887;221888;221889 221886 4 LTTTGQVTSPVK Unmodified 1230.682 0.68196691 1613 P49916 LIG3 DNA ligase 3 yes yes 0 0 0 By MS/MS 2 0 1 1 41.499 36.403 2 0.0123 47617 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.136 56.05 17190000 0 17190000 0 0 0 0 0 0 0 0 0 0 0 0 0 33349 1613 30463 280178 221890;221891 221891 2 LTTTSGVQDELHLPLNSPLPGSELTK Unmodified 2746.4389 0.43888968 4982 Q9UL03 INTS6 Integrator complex subunit 6 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 89.763 87.387 3 1.5091E-38 109101 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.11 105.61 107170000 0 102740000 0 0 0 0 0 0 0 0 0 0 0 0 4424000 33350 4982 30464 280179;280180 221892;221893 221892 2 LTTVQIGHDNSGLLAK Unmodified 1665.905 0.90498399 3017 Q6ZUT9 DENND5B DENN domain-containing protein 5B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62.185 61.414 3 0.0012497 69874 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 37.083 18.008 182440000 48674000 0 9594300 6831800 7622000 13251000 8572600 13030000 6689700 11154000 9130200 14847000 10587000 9535400 12922000 33351 3017 30465 280181;280182;280183;280184;280185;280186;280187;280188;280189;280190;280191;280192;280193;280194 221894;221895;221896;221897;221898;221899;221900;221901;221902;221903 221898 10 LTTYLHSQLKSLSASTLSMSSGSSLGSLASSRGSLNTSSR Unmodified 4059.0543 0.05425036 2866 Q6AWC2 WWC2 Protein WWC2 yes yes 0 0 2 By MS/MS 2 0 1 1 99.44 91.31 4 0.028183 117713 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 14.044 7.5788 36417000 36417000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33352 2866 30466 280195 221904 221904 1 LTTYPQTTIR Unmodified 1192.6452 0.64518747 3566 Q8WVV4 POF1B Protein POF1B yes yes 0 0 0 By MS/MS By MS/MS 10 0 3 2 1 44.643 44.812 2 0.0035453 50264 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 76.1 54.014 13881000 0 0 0 0 0 0 0 13881000 0 0 0 0 0 0 0 33353 3566 30467 280196;280197;280198 221905;221906;221907 221905 3 LTTYPQTTIRK Unmodified 1320.7402 0.74015049 3566 Q8WVV4 POF1B Protein POF1B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 33.464 33.599 3 0.0049876 36702 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 32.999 24.936 146840000 0 0 0 77682000 6399600 4968500 6341800 24592000 0 0 7652900 9612400 7403600 2189800 0 33354 3566 30468 280199;280200;280201;280202;280203;280204;280205;280206;280207 221908;221909;221910;221911;221912;221913;221914;221915 221909 7 LTVADALEPVQFEDGEK Unmodified 1859.9153 0.9152739 1299 P31321 PRKAR1B cAMP-dependent protein kinase type I-beta regulatory subunit yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 83.772 83.889 2 1.2591E-07 97218 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 103.75 76.965 11570000 0 0 0 0 0 0 0 0 0 3687400 0 4446100 0 3436100 0 33355 1299 30469 280208;280209;280210 221916;221917 221916 1 LTVADALEPVQFEDGQK Unmodified 1858.9313 0.93125832 927 P10644 PRKAR1A cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.67 1.6 1 23 1 2 2 2 2 1 2 2 2 2 2 2 2 83.547 83.402 2;3 1.6444E-95 96204 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 185.57 172.59 504350000 0 24212000 0 6034400 15058000 34398000 15160000 14311000 24331000 72853000 53787000 59439000 25443000 45714000 113610000 33356 927 30470 280211;280212;280213;280214;280215;280216;280217;280218;280219;280220;280221;280222;280223;280224;280225;280226;280227;280228;280229;280230;280231;280232;280233;280234 221918;221919;221920;221921;221922;221923;221924;221925;221926;221927;221928;221929;221930;221931;221932;221933;221934;221935;221936;221937 221924 17 LTVAENEAETK Unmodified 1203.5983 0.59829686 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.22 3.94 2 4 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 36.051 35.558 1;2 1.7731E-11 28042 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 156.83 96.39 2483800000 149650000 976960000 5914800 68734000 62123000 150260000 89556000 75671000 61294000 120510000 161410000 201170000 100540000 92975000 166990000 33357 848 30471 280235;280236;280237;280238;280239;280240;280241;280242;280243;280244;280245;280246;280247;280248;280249;280250;280251;280252 221938;221939;221940;221941;221942;221943;221944;221945;221946;221947;221948;221949;221950;221951;221952;221953 221944 15 LTVDDFEFR Unmodified 1140.5451 0.54513908 4919 Q9UI26 IPO11 Importin-11 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching 10 0 5 1 1 1 1 1 78.55 78.657 2 0.014773 90853 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 57.96 36.263 14399000 0 0 0 0 0 3564900 1969200 0 2367600 0 0 0 2361700 4135600 0 33358 4919 30472 280253;280254;280255;280256;280257 221954;221955;221956 221954 3 LTVDEAVR Unmodified 901.4869 0.48689592 2501 Q15149 PLEC Plectin yes no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 36.974 37.223 2 0.031953 40567 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 54.611 13.926 171570000 0 0 0 12598000 0 12761000 15562000 12681000 0 19995000 17488000 24788000 21595000 14490000 19610000 33359 2501 30473 280258;280259;280260;280261;280262;280263;280264;280265;280266;280267 221957;221958 221958 2 LTVDSAIAR Unmodified 944.5291 0.52909508 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 44.911 45.083 2 0.0071436 51112 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 73.208 23.766 433470000 0 0 0 58529000 25231000 25671000 26867000 52956000 19592000 28373000 43233000 48393000 48892000 21352000 34379000 33360 1029 30474 280268;280269;280270;280271;280272;280273;280274;280275;280276;280277;280278;280279 221959;221960;221961 221961 3 LTVDSAIARDLIDFDDRQQIYAAEK Unmodified 2865.4509 0.45085135 1029 P15924 DSP Desmoplakin yes yes 0 0 2 By MS/MS 2 0 1 1 95.164 87.034 4 8.0724E-05 112554 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.747 41.667 7843800 7843800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33361 1029 30475 280280 221962 221962 1 LTVEDLEK Unmodified 945.50188 0.50187728 2564 Q15691 MAPRE1 Microtubule-associated protein RP/EB family member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.48 1 2 1 12 3 1 1 1 1 1 1 1 1 1 1 1 1 1 52.804 51.948 2 0.011953 65256 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.66 63.548 4703600000 0 3981000000 25256000 26349000 23572000 79522000 43410000 36653000 30811000 73077000 99707000 61216000 41002000 50858000 131140000 33362 2564 30476 280281;280282;280283;280284;280285;280286;280287;280288;280289;280290;280291;280292;280293;280294;280295;280296 221963;221964;221965;221966;221967;221968;221969;221970;221971;221972;221973 221965 7 LTVEDPVTVEYITR Unmodified 1633.8563 0.85630246 219 O14818;Q8TAA3 PSMA7;PSMA8 Proteasome subunit alpha type-7;Proteasome subunit alpha type-7-like yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 80.575 80.636 2;3 6.9922E-20 93234 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 140.39 121.13 456280000 0 0 0 10799000 10924000 16313000 9255300 18955000 11829000 29849000 57720000 66521000 10823000 38786000 174510000 33363 219 30477 280297;280298;280299;280300;280301;280302;280303;280304;280305;280306;280307;280308;280309;280310;280311;280312;280313;280314;280315;280316;280317;280318;280319;280320 221974;221975;221976;221977;221978;221979;221980;221981;221982;221983;221984;221985;221986;221987 221975 14 LTVEEAFK Unmodified 935.4964 0.49639797 1802 P58107 EPPK1 Epiplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.4 3.2 1 4 1 1 1 1 1 55.91 54.759 2 0.02313 63406 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 60.589 26.793 66548000 0 24857000 0 14192000 0 0 0 0 0 7351000 11353000 0 0 8795300 0 33364 1802 30478 280321;280322;280323;280324;280325 221988;221989;221990 221990 3 LTVENSPK Unmodified 886.476 0.47599688 343 O43583 DENR Density-regulated protein yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 20.874 16.608 2 0.0065377 22033 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 139.31 39.247 325860000 28789000 297070000 0 0 0 0 0 0 0 0 0 0 0 0 0 33365 343 30479 280326;280327 221991;221992 221991 2 LTVEQEFMSGIDTDK Unmodified 1711.7975 0.79746695 3742 Q96AX1 VPS33A Vacuolar protein sorting-associated protein 33A yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 86.236 82.22 2 1.0223E-57 102129 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 175.57 169.39 53538000 0 53538000 0 0 0 0 0 0 0 0 0 0 0 0 0 33366 3742 30480 280328;280329 221993;221994 221993 2 LTVLPDEICNLK Unmodified 1413.7538 0.75375164 3378 Q8N9N7 LRRC57 Leucine-rich repeat-containing protein 57 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 81.406 80.5 2 4.0402E-06 99676 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.71 102.76 105340000 0 79308000 0 1571200 3324800 5114500 3145300 0 0 0 0 6407000 2489100 3979400 0 33367 3378 30481 280330;280331;280332;280333;280334;280335;280336;280337;280338 221995;221996;221997;221998;221999;222000;222001;222002 221997 6 LTVLQMTHNK Unmodified 1183.6383 0.63832796 3785 Q96CV9 OPTN Optineurin yes yes 0 0 0 By MS/MS 2 0 1 1 56.71 48.53 3 0.032692 66264 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 33.89 22.358 5421900 5421900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33368 3785 30482 280339 222003 222003 1 LTVLSEER Unmodified 945.51311 0.51311067 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.455 39.634 2 0.0063839 43661 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 101.33 53.479 220270000 0 0 0 11635000 7567300 18312000 14085000 8449500 9303200 19669000 26607000 27271000 15179000 16905000 45282000 33369 2344 30483 280340;280341;280342;280343;280344;280345;280346;280347;280348;280349;280350;280351 222004;222005;222006;222007;222008;222009;222010;222011;222012;222013 222008 9 LTVMTDLEDK Unmodified 1163.5744 0.5743903 2208 Q12907 LMAN2 Vesicular integral-membrane protein VIP36 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 61.42 61.454 2 0.013411 69397 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.276 29.039 9298000 0 0 0 0 3059800 0 0 0 0 0 0 0 0 0 6238200 33370 2208 30484 280352;280353 222014;222015 222014 2 LTVMYSQINGASR Unmodified 1438.7238 0.7238485 2401 Q14258 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 60.56 60.926 2 0.0023993 68803 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.555 44.882 19295000 0 0 0 0 0 0 0 2500600 0 0 3160500 3188300 0 2703700 7742400 33371 2401 30485 280354;280355;280356;280357;280358 222016;222017 222016 2 LTVNEAVK Unmodified 872.49673 0.49673232 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS 10 0 1 1 29.975 30.678 2 0.028474 32310 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.721 17.423 23557000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23557000 33372 2501 30486 280359 222018 222018 1 LTVNGFVEPHK Unmodified 1239.6612 0.66117189 4919 Q9UI26 IPO11 Importin-11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 5 2 1 2 60.799 54.787 2;3 0.0014078 71101 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.34 57.894 549540000 296600000 151850000 101090000 0 0 0 0 0 0 0 0 0 0 0 0 33373 4919 30487 280360;280361;280362;280363;280364 222019;222020;222021;222022;222023;222024;222025;222026;222027;222028;222029 222019 9 LTVNPGTK Unmodified 828.47052 0.47051757 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.53 2.94 1 2 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 21.235 20.555 2 0.0051251 20297 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 129.68 49.743 1163500000 832400 598220000 0 18200000 21601000 62083000 33424000 21754000 34858000 60055000 64134000 57190000 52930000 53469000 84721000 33374 894 30488 280365;280366;280367;280368;280369;280370;280371;280372;280373;280374;280375;280376;280377;280378;280379 222030;222031;222032;222033;222034;222035;222036;222037;222038;222039;222040;222041 222039 8 LTVPDDIAANCIYLNIPNK Unmodified 2143.0983 0.098340421 579 O94760 DDAH1 N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 yes yes 0 0 0 By MS/MS 2 0 1 1 92.683 87.773 2 2.2583E-17 109062 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 137.59 122.04 39829000 0 39829000 0 0 0 0 0 0 0 0 0 0 0 0 0 33375 579 30489 280380 222042;222043 222043 2 LTVPFLLLQGSADR Unmodified 1528.8613 0.86132826 4045 Q99685 MGLL Monoglyceride lipase yes yes 0 0 0 By MS/MS 10 0 1 1 95.03 95.177 2 0.00048945 110363 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.01 51.574 1385400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1385400 33376 4045 30490 280381 222044 222044 1 LTVQEEPATTNREPSHIRK Unmodified 2205.1502 0.15019307 3423 Q8NEC7 GSTCD Glutathione S-transferase C-terminal domain-containing protein yes yes 0 0 2 By MS/MS 2 0 1 1 36.708 30.279 4 0.016108 42300 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 26.412 12.251 10437000 10437000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33377 3423 30491 280382 222045 222045 1 LTVQEEQIVELIEK Unmodified 1669.9138 0.91381734 1695 P52732 KIF11 Kinesin-like protein KIF11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 95.51 91.853 2 6.3058E-24 113827 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 162.49 139.8 21034000 0 20199000 834260 0 0 0 0 0 0 0 0 0 0 0 0 33378 1695 30492 280383;280384;280385 222046;222047 222046 2 LTVSEDGPGVR Unmodified 1128.5775 0.57750184 3788 Q96CW6 SLC7A6OS Probable RNA polymerase II nuclear localization protein SLC7A6OS yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 38.036 38.277 2 0.0013675 41299 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.233 48.096 75231000 0 0 0 0 4260900 4936400 4764000 5177000 4378100 5613400 10132000 6731900 7495700 7832000 13909000 33379 3788 30493 280386;280387;280388;280389;280390;280391;280392;280393;280394;280395;280396 222048;222049;222050;222051;222052;222053;222054 222050 6 LTVSNVLK Unmodified 872.53312 0.53311783 762 P02786 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 54.326 54.463 2 0.023017 62189 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 60.682 30.07 240310000 0 0 0 17440000 24381000 15677000 24627000 18607000 12586000 18660000 20330000 33084000 18799000 14994000 21119000 33380 762 30494 280397;280398;280399;280400;280401;280402;280403;280404;280405;280406;280407;280408 222055;222056 222055 2 LTVSQGNTSVQQDK Unmodified 1503.7529 0.75290002 3101 Q7Z4S6 KIF21A Kinesin-like protein KIF21A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.195 27.392 2 6.4183E-86 29497 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 196.76 170.25 114420000 0 0 0 6605500 5658600 10963000 7840900 7404900 7007300 11435000 12032000 15209000 8763400 8364300 13141000 33381 3101 30495 280409;280410;280411;280412;280413;280414;280415;280416;280417;280418;280419;280420 222057;222058;222059;222060;222061;222062;222063;222064;222065;222066;222067;222068 222057 12 LTVSSLQESGLK Unmodified 1260.6925 0.6925316 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 60.759 60.4 2 3.2276E-08 68552 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 127.76 75.838 379660000 0 80310000 0 12895000 14115000 18880000 20231000 12699000 13765000 26155000 37159000 38080000 21140000 26285000 57941000 33382 1124 30496 280421;280422;280423;280424;280425;280426;280427;280428;280429;280430;280431;280432;280433 222069;222070;222071;222072;222073;222074;222075;222076;222077;222078;222079;222080;222081;222082;222083;222084;222085 222081 17 LTVSSVNNPRK Unmodified 1213.6779 0.67788459 3133 Q86TB9 PATL1 Protein PAT1 homolog 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 1 2 2 2 2 2 2 2 2 2 22.751 22.966 2;3 0.00011303 24413 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 97.456 82.255 984400000 0 0 0 56368000 68113000 8151200 65761000 97980000 59103000 85780000 131520000 155140000 82840000 108500000 65141000 33383 3133 30497 280434;280435;280436;280437;280438;280439;280440;280441;280442;280443;280444;280445;280446;280447;280448;280449;280450;280451;280452;280453;280454;280455;280456 222086;222087;222088;222089;222090;222091;222092;222093;222094;222095;222096;222097;222098;222099;222100;222101;222102;222103;222104 222090 5 LTVTDFFQK Unmodified 1097.5757 0.57571092 3215 Q8IUC4 RHPN2 Rhophilin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 81.793 81.877 2 0.0059097 94812 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 76.478 52.709 25482000 0 0 0 0 1425800 2821000 2322300 0 3110000 3804100 3901100 3846200 2207800 2043600 0 33384 3215 30498 280457;280458;280459;280460;280461;280462;280463;280464;280465;280466;280467 222105;222106;222107;222108;222109;222110;222111;222112;222113;222114 222110 10 LTWASHEK Unmodified 970.48723 0.48723027 824 P06702 S100A9 Protein S100-A9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.459 21.663 2 0.0074056 22614 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 89.752 53.872 536120000 0 0 0 223720000 8973400 17985000 17452000 34701000 7901200 43478000 92251000 26081000 27143000 22053000 14380000 33385 824 30499 280468;280469;280470;280471;280472;280473;280474;280475;280476;280477;280478;280479 222115;222116;222117;222118;222119;222120;222121;222122;222123;222124 222123 10 LTWHAYPEDAENK Unmodified 1572.7209 0.72087161 1487 P45973 CBX5 Chromobox protein homolog 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 49.228 49.306 3 0.0011148 54503 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.092 47.77 76498000 0 0 0 6598000 6883700 0 7815300 0 7436200 0 15896000 0 11211000 0 20658000 33386 1487 30500 280480;280481;280482;280483;280484;280485;280486;280487 222125;222126;222127;222128;222129;222130;222131;222132;222133 222126 9 LTWHSCPEDEAQ Unmodified 1471.6038 0.60379294 2249 Q13185 CBX3 Chromobox protein homolog 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.267 43.442 2 1.1207E-06 49248 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 116.73 115.53 439550000 0 0 0 21238000 23513000 24457000 22175000 24794000 17613000 33537000 43331000 73559000 34049000 34109000 87171000 33387 2249 30501 280488;280489;280490;280491;280492;280493;280494;280495;280496;280497;280498;280499 222134;222135;222136;222137;222138;222139;222140;222141;222142;222143;222144;222145;222146;222147 222146 14 LTWLEASEIEDEEEK Unmodified 1819.8364 0.83635488 3944 Q96P48 ARAP1 Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 80.363 80.593 2 0.0026301 92857 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.49 48.957 7487400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7487400 33388 3944 30502 280500 222148 222148 1 LTYDEEYNFENEGEDEAMFVEYRK Oxidation (M) 3035.2655 0.26547792 344 O43592 XPOT Exportin-T yes yes 0 1 1 By MS/MS 2 0 1 1 82.829 74.699 3 0.00012858 97753 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.641 42.382 10628000 10628000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33389 344 30503 280501 222149 222149 427 1 LTYDEEYNFENEGEDEAMFVEYRK Unmodified 3019.2706 0.2705633 344 O43592 XPOT Exportin-T yes yes 0 0 1 By MS/MS 2 0 1 1 86.642 78.512 3 2.2344E-69 102327 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 139.51 136.63 29091000 29091000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33390 344 30503 280502 222150 222150 1 LTYEIEDEK Unmodified 1138.5394 0.539385 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 43.575 43.742 2 0.0034229 49145 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 99.802 64.871 1765000000 0 0 0 304400000 96085000 100320000 104860000 368220000 90252000 131530000 145180000 147020000 192170000 0 84938000 33391 1029 30504 280503;280504;280505;280506;280507;280508;280509;280510;280511;280512;280513 222151;222152;222153;222154;222155;222156;222157;222158 222152 8 LTYEIEDEKR Unmodified 1294.6405 0.64049603 1029 P15924 DSP Desmoplakin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 36.49 36.657 3 0.038409 40432 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 48.284 38.331 31727000 0 0 0 6826600 0 0 3457200 12050000 0 0 0 5672700 3720300 0 0 33392 1029 30505 280514;280515;280516;280517;280518 222159 222159 0 LTYLGCASVNAPR Unmodified 1420.7133 0.71328381 5171 Q9Y3P9 RABGAP1 Rab GTPase-activating protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 60.311 60.452 2 0.00075849 68276 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.942 42.929 32523000 0 0 0 0 3564400 5781700 3013600 0 0 6853300 0 5883700 0 0 7425800 33393 5171 30506 280519;280520;280521;280522;280523;280524 222160;222161 222161 1 LTYLLQNSLGGSAK Unmodified 1463.7984 0.79839365 4199 Q9BW19 KIFC1 Kinesin-like protein KIFC1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.05 74.111 2 1.0623E-06 85745 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 117.25 93.897 64320000 0 0 0 2501600 3913100 4519000 4104200 5819600 3073900 5128100 5909700 6312700 4445000 4730700 13863000 33394 4199 30507 280525;280526;280527;280528;280529;280530;280531;280532;280533;280534;280535;280536 222162;222163;222164;222165;222166;222167;222168;222169;222170;222171;222172;222173;222174 222171 13 LTYLSNHDYK Unmodified 1252.6088 0.60880197 4083 Q9BPZ7 MAPKAP1 Target of rapamycin complex 2 subunit MAPKAP1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 41.481 36.31 3 0.017576 49954 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 39.923 28.287 74547000 61118000 0 13428000 0 0 0 0 0 0 0 0 0 0 0 0 33395 4083 30508 280537;280538 222175;222176 222175 2 LTYQDAVNLQNYVEEK Unmodified 1925.9371 0.93707198 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 6.83 3.76 3 2 7 4 1 1 1 1 1 1 1 1 82.346 80.7 2;3 1.4663E-81 99097 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 249.75 227.52 343470000 0 307990000 2271900 0 5066500 5324800 2039500 0 2788000 10379000 0 7615600 0 0 0 33396 619 30509 280539;280540;280541;280542;280543;280544;280545;280546;280547;280548;280549;280550 222177;222178;222179;222180;222181;222182;222183;222184 222179 6 LTYTAEVSVPK Unmodified 1206.6496 0.64960415 896 P09960 LTA4H Leukotriene A-4 hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.12 3.89 3 1 4 1 2 1 1 1 1 1 61.229 58.599 2 0.00079378 66752 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.192 47.525 1410300000 29825000 1321900000 10458000 0 0 0 0 0 0 0 11624000 6808600 0 6552500 23142000 33397 896 30510 280551;280552;280553;280554;280555;280556;280557;280558 222185;222186;222187;222188;222189;222190;222191;222192 222187 7 LTYTEIHQEYK Unmodified 1423.6983 0.69834526 3847 Q96G28 CFAP36 Cilia- and flagella-associated protein 36 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 47.613 42.863 3 0.0099705 53676 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 51.998 36.242 31865000 0 11405000 20461000 0 0 0 0 0 0 0 0 0 0 0 0 33398 3847 30511 280559;280560 222193;222194 222194 2 LVAAAGPLDMSLPSTPDIK Unmodified 1895.0074 0.0074001489 1055 P17544 ATF7 Cyclic AMP-dependent transcription factor ATF-7 yes yes 0 0 0 By MS/MS 2 0 1 1 92.187 87.276 2 0.0013547 108463 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 51.939 42.984 10294000 0 10294000 0 0 0 0 0 0 0 0 0 0 0 0 0 33399 1055 30512 280561 222195 222195 0 LVAAGSYQR Unmodified 963.51378 0.51377937 2917 Q6P1K2 PMF1 Polyamine-modulated factor 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 2 1 2 1 1 1 1 1 1 23.948 24.148 2 0.0044493 24039 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 86.794 53.056 82940000 0 0 0 3768400 4330300 0 9455500 6817300 8726100 8907500 7964100 7978900 7750600 6162300 11079000 33400 2917 30513 280562;280563;280564;280565;280566;280567;280568;280569;280570;280571;280572;280573;280574 222196;222197;222198;222199;222200;222201;222202;222203;222204 222202 9 LVAASQAALGL Unmodified 1012.5917 0.59169534 64 CON__P02768-1;P02768 ALB Serum albumin yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.71 77.767 2 0.00048452 89934 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 83.753 57.15 + 213080000 0 0 0 33955000 17381000 10342000 9444000 12378000 10958000 24905000 21801000 20749000 24010000 12840000 14316000 33401 64 30514 280575;280576;280577;280578;280579;280580;280581;280582;280583;280584;280585;280586 222205;222206;222207;222208;222209;222210;222211;222212;222213;222214;222215;222216 222205 11 LVAEDAPSPAAPPLSSGGPR Unmodified 1887.969 0.96904081 420 O60658 PDE8A High affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8A yes yes 0 0 0 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 63.689 63.728 2 0.043887 72927 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 23.481 12.871 12151000 0 0 0 0 2399200 0 2090200 0 0 0 4090000 0 0 3571800 0 33402 420 30515 280587;280588;280589;280590 222217 222217 1 LVAEDLSQDCFWTK Unmodified 1710.7923 0.792322 417 O60610 DIAPH1 Protein diaphanous homolog 1 yes yes 0 0 0 By MS/MS By matching 2.33 0.471 2 1 2 1 83.131 79.628 2 3.1256E-67 98907 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 205.52 188.89 294140000 0 288060000 6083200 0 0 0 0 0 0 0 0 0 0 0 0 33403 417 30516 280591;280592;280593 222218;222219;222220 222218 3 LVAEMEVGTEQTDR Oxidation (M) 1592.7352 0.73520105 30 Q9UFD9;A6NNM3;A6NJZ7 RIMBP3;RIMBP3B;RIMBP3C RIMS-binding protein 3A;RIMS-binding protein 3B;RIMS-binding protein 3C yes no 0 1 0 By MS/MS 10 0 1 1 57.572 57.613 2 0.018349 65623 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 47.187 28.515 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33404 30 30517 280594 222221 222221 28 1 LVAGEHGLIIR Unmodified 1176.6979 0.69789175 375 O43847 NRD1 Nardilysin yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.075 52.221 3 0.00016085 57499 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.596 63.122 242150000 0 0 0 10359000 8807300 13166000 9221500 14823000 12699000 18964000 25937000 19713000 17346000 22972000 68144000 33405 375 30518 280595;280596;280597;280598;280599;280600;280601;280602;280603;280604;280605;280606 222222;222223;222224;222225;222226;222227;222228;222229;222230;222231 222224 9 LVAGEMGQNEPDQGGQR Unmodified 1784.8112 0.81115996 4051 Q99714 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 34.575 34.474 2 7.7024E-05 37926 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 96.64 90.607 14582000 0 0 0 2519000 2002700 0 1832700 4121200 0 4106500 0 0 0 0 0 33406 4051 30519 280607;280608;280609;280610;280611;280612 222232;222233;222234;222235 222233 4 LVAGLTANEGSQYNPQVADLK Unmodified 2187.1172 0.11716161 2093 Q03181 PPARD Peroxisome proliferator-activated receptor delta yes yes 0 0 0 By MS/MS 2 0 1 1 78.455 73.719 2 9.5983E-30 91914 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 146.47 131.44 10779000 0 10779000 0 0 0 0 0 0 0 0 0 0 0 0 0 33407 2093 30520 280613 222236 222236 1 LVAGQQQVLQQLAEEEPK Unmodified 2007.0637 0.063669474 2067 Q01970 PLCB3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 80.86 80.996 2 1.622E-37 93412 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 155.42 137.75 35106000 0 0 0 0 0 2544000 2922700 1922800 0 4810800 3471900 4855900 2582500 3197000 8798100 33408 2067 30521 280614;280615;280616;280617;280618;280619;280620;280621;280622 222237;222238;222239;222240;222241 222239 5 LVAIVDPHIK Unmodified 1103.6703 0.67028001 2441 Q14697 GANAB Neutral alpha-glucosidase AB yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.31 3.1 1 2 10 1 1 1 1 1 1 1 1 1 1 1 1 1 61.994 61.076 2 0.0056704 68722 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 68.016 39.798 302360000 1226700 10416000 166190000 6343900 0 6477900 7513200 5194900 4842300 9656800 14810000 19834000 0 12614000 37245000 33409 2441 30522 280623;280624;280625;280626;280627;280628;280629;280630;280631;280632;280633;280634;280635 222242;222243;222244;222245;222246;222247;222248;222249;222250;222251;222252;222253;222254 222253 13 LVAIVDVIDQNR Unmodified 1353.7616 0.76161421 1640 P50914 RPL14 60S ribosomal protein L14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 83.438 83.512 2 2.3636E-05 96661 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 102.06 74.319 61421000 0 0 0 0 3340300 5832400 5690900 6259100 0 16123000 0 0 0 0 24175000 33410 1640 30523 280636;280637;280638;280639;280640;280641;280642;280643;280644;280645 222255;222256;222257;222258;222259;222260;222261;222262;222263;222264 222256 10 LVALAVIDEK Unmodified 1069.6383 0.63831118 3896 Q96JJ7 TMX3 Protein disulfide-isomerase TMX3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 75.453 75.504 2 0.0091779 87022 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 58.246 14.432 26597000 0 0 0 1591400 1742400 3288500 2305100 2520900 0 2660700 2219600 3437400 1655400 1436700 3738500 33411 3896 30524 280646;280647;280648;280649;280650;280651;280652;280653;280654;280655;280656 222265;222266;222267;222268 222267 4 LVARPEPATGYTLEFR Unmodified 1818.9628 0.96283322 2626 Q16658 FSCN1 Fascin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.757 71.824 3 6.9157E-16 82119 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 121.82 111.76 556680000 0 0 0 5845300 1811800 6523200 3265300 7880800 4613200 6532500 63699000 67494000 3799400 54823000 330390000 33412 2626 30525 280657;280658;280659;280660;280661;280662;280663;280664;280665;280666;280667;280668 222269;222270;222271;222272;222273;222274;222275;222276;222277;222278;222279 222272 10 LVASAEQLLK Unmodified 1070.6336 0.63356015 4737 Q9NY33 DPP3 Dipeptidyl peptidase 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.64 2.9 1 1 9 2 1 1 1 1 1 1 1 1 1 67.083 66.297 2 0.0078024 74656 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.582 24.74 76649000 0 13625000 0 0 1556100 1870800 2716300 3204000 0 0 11047000 5964600 2486200 10224000 23955000 33413 4737 30526 280669;280670;280671;280672;280673;280674;280675;280676;280677;280678;280679 222280;222281;222282;222283 222281 4 LVASAYSIAQK Unmodified 1149.6394 0.63937381 701 O95861 BPNT1 3'(2'),5'-bisphosphate nucleotidase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 48.368 48.587 2 0.00031039 54611 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 94.85 57.122 73081000 0 0 0 2957800 0 8672900 3629600 4123200 0 5980400 11539000 9669200 0 6312500 20197000 33414 701 30527 280680;280681;280682;280683;280684;280685;280686;280687;280688 222284;222285;222286;222287;222288;222289;222290 222288 7 LVASMEEAR Unmodified 1004.4961 0.4960804 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 31.684 31.803 2 0.020656 35168 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 52.937 28.014 49140000 0 0 0 5302000 6788600 0 0 4573100 5702100 7912500 9122500 0 0 0 9739300 33415 2501 30528 280689;280690;280691;280692;280693;280694;280695 222291;222292 222292 2 LVATNMIANGK Unmodified 1130.6118 0.61177885 4266 Q9BZH6 WDR11 WD repeat-containing protein 11 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 54.349 47.398 2 5.3943E-17 61766 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 175.91 144.6 149590000 44418000 105170000 0 0 0 0 0 0 0 0 0 0 0 0 0 33416 4266 30529 280696;280697 222293;222294;222295;222296;222297 222293 5 LVATNMIANGK Oxidation (M) 1146.6067 0.60669348 4266 Q9BZH6 WDR11 WD repeat-containing protein 11 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 35.112 28.764 2 0.0054605 40365 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.23 39.338 7267800 7267800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33417 4266 30529 280698;280699 222298;222299 222299 5726 2 LVATSLEGK Unmodified 916.52295 0.52294707 3929 Q96MX6 WDR92 WD repeat-containing protein 92 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 35.127 34.856 2 0.012256 38424 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 61.582 22.746 415330000 0 330770000 0 4426100 3916200 0 5730300 5554100 0 8572500 10661000 8446700 10007000 8447100 18793000 33418 3929 30530 280700;280701;280702;280703;280704;280705;280706;280707;280708;280709;280710 222300;222301;222302;222303 222303 4 LVAVGGQPR Unmodified 895.52395 0.52395013 2991 Q6XQN6 NAPRT Nicotinate phosphoribosyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28.002 27.436 2 0.0091853 36653 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.029 56.739 343900000 54625000 68977000 0 10812000 7552300 12155000 7590400 8142900 7146700 13056000 30313000 33959000 8679000 15615000 65273000 33419 2991 30531 280711;280712;280713;280714;280715;280716;280717;280718;280719;280720;280721;280722;280723;280724 222304;222305;222306;222307;222308;222309;222310;222311;222312;222313;222314;222315;222316 222308 12 LVAVGGQPRMK Oxidation (M) 1170.6543 0.65431237 2991 Q6XQN6 NAPRT Nicotinate phosphoribosyltransferase yes yes 0 1 1 By MS/MS 2 0 1 1 27.093 21.704 3 0.045588 30972 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.461 55.461 18844000 18844000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33420 2991 30532 280725 222317 222317 0 LVCSGENDNHGQIANLPSAVTSDQK Unmodified 2653.2402 0.24020664 3601 Q8WYP5 AHCTF1 Protein ELYS yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 61.176 60.441 3 5.9683E-19 77295 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.08 71.466 89489000 0 26646000 0 4380100 2984900 4857600 4568600 4078600 0 5684800 4161800 10763000 6837300 4960100 9565700 33421 3601 30533 280726;280727;280728;280729;280730;280731;280732;280733;280734;280735;280736;280737;280738 222318;222319;222320;222321;222322;222323;222324;222325;222326;222327;222328;222329;222330;222331 222322 14 LVCTDIADVSVK Unmodified 1318.6803 0.68025235 296 O43148 RNMT mRNA cap guanine-N7 methyltransferase yes yes 0 0 0 By MS/MS 2 0 1 1 70.891 65.074 2 0.0011498 82745 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.948 71.48 226780000 0 226780000 0 0 0 0 0 0 0 0 0 0 0 0 0 33422 296 30534 280739 222332;222333 222332 2 LVDAEEVAR Unmodified 1000.5189 0.51892433 1088 P19419 ELK1 ETS domain-containing protein Elk-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 34.861 34.979 2 0.010372 37821 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 64.42 11.695 416750000 0 0 0 0 57333000 0 0 0 0 0 217920000 0 141500000 0 0 33423 1088 30535 280740;280741;280742 222334;222335;222336 222334 3 LVDAGFVWTEPHSK Unmodified 1584.7936 0.79364262 3790 Q96D46 NMD3 60S ribosomal export protein NMD3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 72.92 73.114 3 0.028229 83796 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 30.133 20.212 54035000 0 0 0 0 0 10060000 0 5443600 0 8590000 6534100 5807500 0 0 17600000 33424 3790 30536 280743;280744;280745;280746;280747;280748 222337 222337 1 LVDCHRELEK Unmodified 1297.6449 0.6448699 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.96 2.69 3 20 1 1 1 1 1 2 1 1 2 2 2 2 2 2 2 16.3 15.994 2;3 0.00094206 15276 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 80.979 52.174 489070000 47006000 8731600 15201000 21475000 10203000 20508000 16341000 21325000 12524000 28174000 48616000 75324000 41064000 50488000 72094000 33425 3676 30537 280749;280750;280751;280752;280753;280754;280755;280756;280757;280758;280759;280760;280761;280762;280763;280764;280765;280766;280767;280768;280769;280770;280771 222338;222339;222340;222341;222342;222343;222344;222345;222346;222347;222348;222349;222350;222351 222349 9 LVDEDFPEDSSSQK Unmodified 1594.6999 0.6998614 25 A6NDU8 C5orf51 UPF0600 protein C5orf51 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 47.388 46.013 2 1.242E-16 51288 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 122.51 109.93 276150000 12879000 78871000 0 8654700 8083200 18314000 13059000 9879400 7805100 21303000 18217000 21977000 16717000 13266000 27119000 33426 25 30538 280772;280773;280774;280775;280776;280777;280778;280779;280780;280781;280782;280783;280784;280785;280786;280787 222352;222353;222354;222355;222356;222357;222358;222359;222360;222361;222362;222363;222364;222365;222366;222367 222362 16 LVDEEPQLTK Unmodified 1170.6132 0.61321864 4879 Q9UG63 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42.384 41.621 2 1.7503E-11 46478 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 161.92 118.67 2176200000 16859000 367010000 0 100970000 114990000 138930000 130650000 136080000 109730000 197570000 181140000 206110000 165480000 131910000 178780000 33427 4879 30539 280788;280789;280790;280791;280792;280793;280794;280795;280796;280797;280798;280799;280800;280801 222368;222369;222370;222371;222372;222373;222374;222375;222376;222377;222378;222379;222380;222381;222382;222383;222384;222385 222382 18 LVDFEAMTAPGSEAFSK Unmodified 1798.8448 0.8447515 3399 Q8NBP0 TTC13 Tetratricopeptide repeat protein 13 yes yes 0 0 0 By MS/MS 2 0 1 1 87.564 82.756 2 2.9999E-11 102880 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.649 75.513 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33428 3399 30540 280802 222386 222386 1 LVDFGSAAK Unmodified 906.48108 0.48108226 189 O14578 CIT Citron Rho-interacting kinase yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 46.419 41.772 2 0.024265 54145 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.491 32.672 33813000 0 28778000 5035000 0 0 0 0 0 0 0 0 0 0 0 0 33429 189 30541 280803;280804 222387 222387 1 LVDFVIHFMEEIDK Unmodified 1733.8698 0.86984404 1806 P59998 ARPC4 Actin-related protein 2/3 complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 101.98 95.555 2;3 0.00033161 120496 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.839 83.735 17518000 10924000 6594000 0 0 0 0 0 0 0 0 0 0 0 0 0 33430 1806 30542 280805;280806 222388;222389 222388 2 LVDGLATSWVNSSNYK Unmodified 1752.8683 0.86826413 3094 Q7Z460 CLASP1 CLIP-associating protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 83.867 79.147 2 0.00096716 98470 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.17 56.319 17337000 0 17337000 0 0 0 0 0 0 0 0 0 0 0 0 0 33431 3094 30543 280807 222390 222390 1 LVDIIAAVPPQYR Unmodified 1453.8293 0.82929985 4477 Q9H9T3 ELP3 Elongator complex protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 85.467 85.542 2 0.0017918 99142 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 61.65 45.084 5769100 0 0 0 0 0 2584700 0 0 0 3184400 0 0 0 0 0 33432 4477 30544 280808;280809;280810;280811;280812;280813 222391;222392;222393;222394;222395;222396 222392 6 LVDIIAAVPPQYRK Unmodified 1581.9243 0.92426287 4477 Q9H9T3 ELP3 Elongator complex protein 3 yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 78.522 78.671 3 0.019807 90835 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 28.297 25.734 30653000 0 0 0 0 0 7040300 0 0 2279200 3517600 3613000 6886200 0 0 7316700 33433 4477 30545 280814;280815;280816;280817;280818;280819 222397;222398;222399 222397 2 LVDISYGGENGFNQAIELSTEVLSNVK Unmodified 2895.4502 0.45018265 1902 P62495 ETF1 Eukaryotic peptide chain release factor subunit 1 yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 2 2 1 3 101.16 97.06 2;3 1.0097E-38 119623 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.35 90.156 138800000 4320900 134480000 0 0 0 0 0 0 0 0 0 0 0 0 0 33434 1902 30546 280820;280821;280822;280823 222400;222401;222402;222403 222402 4 LVDLDWR Unmodified 915.48142 0.48141661 4785 Q9P000 COMMD9 COMM domain-containing protein 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 71.567 71.68 2 0.049912 81655 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.306 18.775 36681000 0 0 0 2016500 0 2997100 2338400 4223600 0 3050600 4061300 3797600 3630200 2900600 7664600 33435 4785 30547 280824;280825;280826;280827;280828;280829;280830;280831;280832;280833 222404 222404 1 LVDLPISK Unmodified 883.53787 0.53786886 5004 Q9ULT8 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 63.07 63.236 2 0.048796 72314 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 47.349 21.24 80265000 0 0 0 0 4031600 7963000 5088200 6311100 3103500 9269800 8887200 7697200 8475400 7076500 12361000 33436 5004 30548 280834;280835;280836;280837;280838;280839;280840;280841;280842;280843;280844 222405 222405 1 LVDLYYQEK Unmodified 1169.5968 0.5968403 2947 Q6PGP7 TTC37 Tetratricopeptide repeat protein 37 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 62.554 57.216 2 0.007431 73465 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.027 44.961 51262000 0 51262000 0 0 0 0 0 0 0 0 0 0 0 0 0 33437 2947 30549 280845;280846 222406 222406 1 LVDMMER 2 Oxidation (M) 924.40449 0.4044882 170 O00571;O15523 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 0 2 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 10.555 10.683 2 0.03445 9355 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 43.124 33.653 71913000 0 0 0 0 5673900 7280100 9017100 0 3590100 10556000 0 14055000 10846000 0 10895000 33438 170 30550 280847;280848;280849;280850;280851;280852;280853;280854 222407 222407 1 LVDNNTALVDK Unmodified 1200.635 0.63501672 4992 Q9ULD2 MTUS1 Microtubule-associated tumor suppressor 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 42.109 36.186 2 0.0064992 47051 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.789 56.992 31307000 10805000 20502000 0 0 0 0 0 0 0 0 0 0 0 0 0 33439 4992 30551 280855;280856 222408 222408 1 LVDNTDPHAWVVQGPGGETK Unmodified 2119.0334 0.033431978 3666 Q92817 EVPL Envoplakin yes yes 0 0 0 By MS/MS By matching By MS/MS 4.67 3.77 2 1 1 1 1 68.679 65.27 3 1.0764E-08 83401 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.783 59.17 17908000 0 13191000 961810 3755400 0 0 0 0 0 0 0 0 0 0 0 33440 3666 30552 280857;280858;280859 222409;222410;222411 222409 3 LVDPERDMSLR Unmodified 1329.6711 0.67108465 2407 Q14444 CAPRIN1 Caprin-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 2 2 1 2 2 2 2 1 2 2 2 51.879 52.042 2;3 0.00010517 58958 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 121.36 107.4 2055300000 0 0 0 113810000 129250000 196560000 110430000 153640000 143370000 192970000 232670000 148210000 173750000 187510000 273080000 33441 2407 30553 280860;280861;280862;280863;280864;280865;280866;280867;280868;280869;280870;280871;280872;280873;280874;280875;280876;280877;280878;280879;280880 222412;222413;222414;222415;222416;222417;222418;222419;222420;222421;222422;222423;222424;222425;222426 222414 6 LVDPERDMSLR Oxidation (M) 1345.666 0.66599927 2407 Q14444 CAPRIN1 Caprin-1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 16 1 1 1 1 1 1 3 2 2 1 1 1 34.554 34.785 3 0.00044259 38881 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 73.781 66.893 1241900000 0 0 0 73973000 58567000 83572000 81536000 59919000 62646000 193900000 238070000 183010000 87014000 61110000 58531000 33442 2407 30553 280881;280882;280883;280884;280885;280886;280887;280888;280889;280890;280891;280892;280893;280894;280895;280896 222427;222428;222429;222430;222431;222432;222433;222434;222435;222436 222436 3946 5 LVDPLFSMK Unmodified 1048.5627 0.5627034 3506 Q8TDQ7 GNPDA2 Glucosamine-6-phosphate isomerase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 86.237 81.109 2 0.006757 102035 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.56 91.207 109380000 5522400 99275000 4578900 0 0 0 0 0 0 0 0 0 0 0 0 33443 3506 30554 280897;280898;280899 222437;222438;222439 222437 2 LVDPLFSMK Oxidation (M) 1064.5576 0.55761802 3506 Q8TDQ7 GNPDA2 Glucosamine-6-phosphate isomerase 2 yes yes 0 1 0 By MS/MS 2 0 1 1 78.056 69.926 2 0.03462 91878 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.91 47.922 6994200 6994200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33444 3506 30554 280900 222440 222440 1 LVDPLGEMLAPSWEEHATCLANAEEQDMQRVLIDISEK Unmodified 4337.0654 0.065408673 653 O95394 PGM3 Phosphoacetylglucosamine mutase yes yes 0 0 1 By MS/MS 2 0 1 1 102.09 93.959 4 0.00031633 120946 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 29.722 22.043 21040000 21040000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33445 653 30555 280901 222441 222441 1 LVDPLYSIK Unmodified 1046.6012 0.60119739 1514 P46926 GNPDA1 Glucosamine-6-phosphate isomerase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 76.925 75.795 2 0.0026386 94800 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.04 59.755 1526700000 46463000 1240300000 54019000 5497900 7027200 11870000 9795000 6749700 6555000 12400000 28030000 19077000 8572600 16474000 53929000 33446 1514 30556 280902;280903;280904;280905;280906;280907;280908;280909;280910;280911;280912;280913;280914;280915;280916;280917 222442;222443;222444;222445;222446;222447;222448;222449;222450;222451;222452;222453;222454;222455 222445 14 LVDPVAGSGGPGSR Unmodified 1267.6521 0.65206377 655 O95400 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 42.056 42.25 2 0.00057595 47391 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 69.01 63.851 143940000 0 0 0 6382900 9692800 0 9825400 10253000 0 11887000 20534000 23779000 17437000 11274000 22873000 33447 655 30557 280918;280919;280920;280921;280922;280923;280924;280925;280926;280927 222456;222457;222458;222459;222460;222461;222462;222463;222464 222461 7 LVDPVAGSGGPGSRFK Unmodified 1542.8154 0.8154407 655 O95400 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 yes yes 0 0 1 By MS/MS 2 0 1 1 61.718 53.463 3 0.0037074 72276 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.522 40.814 31139000 31139000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33448 655 30558 280928 222465 222465 1 LVDQALLTMDTYLGQFPDIK Unmodified 2280.1712 0.17117101 162 O00499 BIN1 Myc box-dependent-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 3 1 99.664 95.863 2;3 7.1304E-06 118323 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.532 89.818 32190000 0 31250000 939640 0 0 0 0 0 0 0 0 0 0 0 0 33449 162 30559 280929;280930;280931;280932 222466;222467;222468;222469 222467 4 LVDQNLNK Unmodified 942.51345 0.51344502 389 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 19.651 19.817 2 0.0059726 20556 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 118.69 72.023 122660000 0 0 0 9526000 9331200 12576000 12137000 10947000 8130900 15805000 784310 17588000 15161000 10673000 0 33450 389 30560 280933;280934;280935;280936;280937;280938;280939;280940;280941;280942;280943 222470;222471;222472;222473;222474;222475;222476;222477;222478;222479 222478 9 LVDQSGPPHEPK Unmodified 1302.6568 0.65681479 1766 P55265 ADAR Double-stranded RNA-specific adenosine deaminase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.86 3.49 5 1 16 1 3 2 1 2 1 2 1 1 1 1 2 2 2 21.745 20.834 2;3 3.1378E-07 27383 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.28 89.192 541930000 12202000 261470000 11201000 13847000 12029000 14803000 16411000 15372000 0 21652000 25593000 31276000 36294000 22372000 47408000 33451 1766 30561 280944;280945;280946;280947;280948;280949;280950;280951;280952;280953;280954;280955;280956;280957;280958;280959;280960;280961;280962;280963;280964;280965 222480;222481;222482;222483;222484;222485;222486;222487;222488;222489;222490;222491;222492;222493;222494;222495;222496;222497 222483 16 LVDSPDIQPVGTCEK Unmodified 1656.8029 0.80288668 5073 Q9UQR0 SCML2 Sex comb on midleg-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.895 56.021 2 3.851E-20 62857 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 126.76 119.2 116820000 0 0 0 8548300 7543300 7657300 9555400 10269000 6449300 12082000 12186000 12443000 8296600 8763600 13030000 33452 5073 30562 280966;280967;280968;280969;280970;280971;280972;280973;280974;280975;280976;280977 222498;222499;222500;222501;222502;222503;222504;222505;222506;222507;222508;222509 222501 12 LVDVICEK Unmodified 974.51067 0.51066783 682 O95716 RAB3D Ras-related protein Rab-3D no no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 46.72 46.887 2 0.013044 52589 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 73.248 30.125 84931000 0 0 0 5775500 3292900 6991700 5218300 3109700 0 8682100 9261200 13748000 12037000 6919000 9895500 33453 682 30563 280978;280979;280980;280981;280982;280983;280984;280985;280986;280987;280988 222510;222511;222512;222513;222514 222511 5 LVDYARSVHEEF Unmodified 1463.7045 0.70449327 4110 Q9BRK5 SDF4 45 kDa calcium-binding protein yes yes 0 0 1 By MS/MS By matching By MS/MS 2 0 3 1 1 1 67.471 61.485 3 0.036176 75942 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 52.247 45.666 50216000 11247000 10967000 28002000 0 0 0 0 0 0 0 0 0 0 0 0 33454 4110 30564 280989;280990;280991 222515 222515 0 LVDYDSAR Unmodified 937.45051 0.45051041 162 O00499;Q9UBW5;P49418 BIN1;BIN2;AMPH Myc box-dependent-interacting protein 1;Bridging integrator 2;Amphiphysin yes no 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 25.155 25.543 2 0.017183 27177 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 66.073 47.291 69238000 0 0 0 0 0 0 0 15881000 0 0 0 0 0 18031000 35326000 33455 162 30565 280992;280993;280994 222516;222517 222517 2 LVEAEVHR Unmodified 951.51378 0.51377937 1742 P54619 PRKAG1 5'-AMP-activated protein kinase subunit gamma-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 18.523 18.725 2 0.013906 19024 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 71.342 36.45 24722000 0 0 0 2618300 2346600 0 0 3120100 0 3555300 0 3907700 3475400 0 5698800 33456 1742 30566 280995;280996;280997;280998;280999;281000;281001 222518;222519;222520;222521;222522 222520 5 LVEAISR Unmodified 786.45995 0.45995289 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.56 28.755 2 0.015446 31371 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 117.93 29.2 310620000 0 0 0 26470000 18145000 27140000 15314000 29066000 564150 37201000 27646000 36436000 28906000 22061000 41668000 33457 2392 30567 281002;281003;281004;281005;281006;281007;281008;281009;281010;281011;281012;281013 222523;222524;222525;222526;222527;222528;222529;222530;222531;222532;222533 222523 11 LVEALAAATEK Unmodified 1114.6234 0.6233894 4109 Q9BRJ7 NUDT16L1 Protein syndesmos yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 5.4 3.77 2 1 2 2 1 1 1 57.686 52.846 2 0.001957 65633 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 93.556 48.803 4184200000 0 4177000000 7131000 0 0 0 0 0 0 0 0 0 0 0 0 33458 4109 30568 281014;281015;281016;281017;281018 222534;222535;222536;222537;222538 222536 4 LVEALCAAGHR Unmodified 1195.6132 0.61317584 1170 P23919 DTYMK Thymidylate kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.903 38.084 3 0.030929 42181 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 33.89 24.235 105470000 0 0 0 4712100 4714400 9947700 5934300 9624600 4752600 7391200 9717300 13913000 13098000 6831700 14831000 33459 1170 30569 281019;281020;281021;281022;281023;281024;281025;281026;281027;281028;281029;281030 222539 222539 1 LVEALCAEHQINLIK Unmodified 1749.9447 0.94474031 1188 P25398 RPS12 40S ribosomal protein S12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 5.43 3.96 4 3 2 1 1 1 1 1 78.949 75.663 3 1.6428E-38 92861 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 126.63 108.22 438280000 323420000 51146000 23755000 0 0 0 0 0 0 0 0 0 6505900 12704000 20745000 33460 1188 30570 281031;281032;281033;281034;281035;281036;281037 222540;222541;222542;222543;222544;222545 222545 5 LVEDMENK Oxidation (M) 992.44846 0.4484615 1525 P47756 CAPZB F-actin-capping protein subunit beta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 2 1 1 1 1 1 1 8.5625 8.6941 2 0.0045421 7029 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 91.9 63.477 170860000 0 0 0 16800000 13087000 8895400 10617000 7706400 7132500 12137000 29634000 21986000 16740000 12232000 13892000 33461 1525 30571 281038;281039;281040;281041;281042;281043;281044;281045;281046;281047;281048;281049;281050 222546;222547;222548;222549;222550;222551;222552;222553;222554;222555;222556;222557 222554 2423 10 LVEDMENK Unmodified 976.45355 0.45354688 1525 P47756 CAPZB F-actin-capping protein subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 21.461 21.753 2 0.0047759 22541 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 113.7 89.064 450870000 0 0 0 0 0 0 43016000 89106000 0 0 0 0 95683000 72845000 150220000 33462 1525 30571 281051;281052;281053;281054;281055;281056;281057;281058;281059 222558;222559;222560;222561;222562;222563;222564;222565;222566 222564 9 LVEDNPSSLSLVEIYK Unmodified 1804.9458 0.94584575 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 84.425 84.531 2 1.3385E-28 97070 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 140.31 107.09 86417000 0 0 0 0 5894400 7607700 6214500 7952100 6075500 10564000 8880500 12998000 4516800 5289900 10424000 33463 5189 30572 281060;281061;281062;281063;281064;281065;281066;281067;281068;281069;281070 222567;222568;222569;222570;222571;222572;222573;222574;222575;222576;222577 222574 11 LVEEEANILGRK Unmodified 1369.7565 0.75652884 5191 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 no no 0 0 1 By MS/MS 2 0 1 1 55.69 51.814 3 0.011715 64776 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 45.653 33.732 8015100 0 0 8015100 0 0 0 0 0 0 0 0 0 0 0 0 33464 5191 30573 281071 222578 222578 1 LVEEEANLLSR Unmodified 1271.6721 0.67213051 610 O94964 SOGA1 Protein SOGA1;N-terminal form;C-terminal 80 kDa form yes yes 0 0 0 By MS/MS 10 0 1 1 61.036 61.162 2 0.0068754 69782 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 64.297 37.783 2057400 0 0 0 0 0 0 2057400 0 0 0 0 0 0 0 0 33465 610 30574 281072 222579 222579 1 LVEEEVNIPNRR Unmodified 1466.7841 0.78414057 4772 Q9NZL9 MAT2B Methionine adenosyltransferase 2 subunit beta yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 45.534 45.79 3 0.0036659 51237 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 36.447 23.614 117550000 0 0 0 0 5838400 0 7390000 0 7799400 7485100 22006000 14195000 0 22770000 30065000 33466 4772 30575 281073;281074;281075;281076;281077;281078;281079;281080 222580;222581;222582;222583;222584 222581 2 LVEEFRSFGVK Unmodified 1309.703 0.7030367 4641 Q9NU22 MDN1 Midasin yes yes 0 0 1 By MS/MS 2 0 1 1 75.286 67.156 3 0.02753 88683 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 38.021 12.009 13893000 13893000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33467 4641 30576 281081 222585 222585 1 LVEEHLDSEIQK Unmodified 1438.7304 0.73037367 185 O14530 TXNDC9 Thioredoxin domain-containing protein 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 5 10 2 2 1 1 1 1 1 1 1 1 1 1 1 44.58 42.516 2;3 5.4224E-31 55210 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 206.49 171.04 462750000 27835000 294130000 37676000 0 2730900 14222000 10586000 0 5307700 12679000 14574000 19883000 10369000 12764000 0 33468 185 30577 281082;281083;281084;281085;281086;281087;281088;281089;281090;281091;281092;281093;281094;281095;281096 222586;222587;222588;222589;222590;222591;222592;222593;222594;222595;222596;222597;222598;222599;222600 222589 14 LVEEHLK Unmodified 866.48617 0.48616764 4440 Q9H7Z6 KAT8 Histone acetyltransferase KAT8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 17.789 17.997 2 0.035265 16564 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.912 28.438 71134000 0 0 0 0 7100300 7625200 5939300 0 5383600 7864100 10556000 16250000 0 0 10416000 33469 4440 30578 281097;281098;281099;281100;281101;281102;281103;281104 222601;222602 222602 2 LVEEKPTK Unmodified 942.5386 0.53859714 1243 P29144 TPP2 Tripeptidyl-peptidase 2 yes yes 0 0 1 By MS/MS 3 0 1 1 10.5 7.1275 2 0.049312 9507 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 113.89 72.387 72188000 0 72188000 0 0 0 0 0 0 0 0 0 0 0 0 0 33470 1243 30579 281105 222603 222603 0 LVEELTTSGEPR Unmodified 1329.6776 0.67760981 2660 Q2YD98 UVSSA UV-stimulated scaffold protein A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 47.372 47.556 2 0.00027515 54048 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 83 64.941 53486000 0 0 0 0 4950100 7050800 6013400 4126900 3607800 0 7896200 0 8610000 4560200 6670200 33471 2660 30580 281106;281107;281108;281109;281110;281111;281112;281113;281114 222604;222605;222606;222607;222608;222609;222610;222611;222612 222612 9 LVEEQNAEK Unmodified 1058.5244 0.52440364 2723 Q5F1R6 DNAJC21 DnaJ homolog subfamily C member 21 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 10.893 10.768 2 0.0074164 9824 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 72.485 44.311 99908000 0 42707000 0 2243700 2960000 4397900 3807900 3400100 3004000 4286200 4865700 10039000 3156800 5043700 9995600 33472 2723 30581 281115;281116;281117;281118;281119;281120;281121;281122;281123;281124;281125;281126;281127 222613;222614;222615;222616;222617;222618 222614 5 LVEESREK Unmodified 988.51892 0.51892433 2530 Q15404 RSU1 Ras suppressor protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 7.0925 4.1006 2 0.014788 6091 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 125.31 62.85 414930000 34316000 210750000 169860000 0 0 0 0 0 0 0 0 0 0 0 0 33473 2530 30582 281128;281129;281130 222619 222619 1 LVEESVK Unmodified 802.44363 0.44363412 1695 P52732 KIF11 Kinesin-like protein KIF11 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 16.571 16.962 2 0.050331 16056 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.717 22.031 28735000 0 0 0 0 0 0 0 0 0 0 0 0 0 14103000 14632000 33474 1695 30583 281131;281132 222620 222620 1 LVEGEEGRMDSPSATVVSAVQSR Oxidation (M) 2419.1649 0.16491644 99 Q6KB66;CON__Q6KB66-1 KRT80 Keratin, type II cytoskeletal 80 yes no 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 58.313 58.384 3 4.2627E-17 66560 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 83.245 75.441 + 146760000 0 0 0 27809000 8620100 8645000 10931000 19087000 5294500 15452000 11462000 15031000 14035000 10397000 0 33475 99 30584 281133;281134;281135;281136;281137;281138;281139;281140;281141;281142;281143 222621;222622;222623;222624;222625;222626;222627;222628;222629;222630;222631;222632;222633;222634 222628 131 14 LVEGEEGRMDSPSATVVSAVQSR Unmodified 2403.17 0.17000181 99 Q6KB66;CON__Q6KB66-1 KRT80 Keratin, type II cytoskeletal 80 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 65.587 65.617 3 9.4527E-10 75060 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 59.356 51.267 + 43675000 0 0 0 5190300 0 3839400 0 13360000 0 5342300 0 11666000 4276500 0 0 33476 99 30584 281144;281145;281146;281147;281148;281149 222635;222636;222637;222638;222639;222640;222641 222639 6 LVEGESDNR Unmodified 1017.4727 0.47270242 583 O94776 MTA2 Metastasis-associated protein MTA2 yes yes 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 9.1611 9.1702 2 0.040202 7383 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 44.447 32.091 2171900 0 0 0 0 595330 0 896700 679920 0 0 0 0 0 0 0 33477 583 30585 281150;281151;281152 222642 222642 1 LVEGESDNRNQQK Unmodified 1515.7277 0.7277479 583 O94776 MTA2 Metastasis-associated protein MTA2 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 6.8776 7.0064 3 0.00044255 5244 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 77.674 56.125 59491000 0 0 0 2501100 2623300 7224400 0 0 4746600 6188100 8326000 9922200 1762800 7842600 8353600 33478 583 30586 281153;281154;281155;281156;281157;281158;281159;281160;281161;281162 222643;222644;222645;222646;222647;222648;222649 222646 2 LVEGFYPAPGLK Unmodified 1289.702 0.70197407 387 O60244 MED14 Mediator of RNA polymerase II transcription subunit 14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77.136 76.666 2 0.00012083 87632 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 87.308 57.053 204960000 0 75113000 3785700 5176500 7111500 8914800 9175500 9441700 7101700 12007000 11823000 15249000 9934000 12618000 17511000 33479 387 30587 281163;281164;281165;281166;281167;281168;281169;281170;281171;281172;281173;281174;281175;281176 222650;222651;222652;222653;222654;222655;222656;222657;222658;222659;222660;222661;222662 222658 13 LVEGLSALVVDVK Unmodified 1340.7915 0.79151736 1097 P19971 TYMP Thymidine phosphorylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.5 0.5 2 2 2 1 1 91.122 86.787 2 8.2599E-10 104746 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 115.18 82.335 25803000 18394000 3561600 3847400 0 0 0 0 0 0 0 0 0 0 0 0 33480 1097 30588 281177;281178;281179;281180 222663;222664;222665;222666;222667;222668 222665 6 LVEGQEK Unmodified 801.42323 0.42323303 421 O60664 PLIN3 Perilipin-3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 6.4648 6.6095 2 0.020538 4705 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 108.24 22.152 144280000 0 0 0 9187900 0 0 26674000 36090000 21578000 10163000 10429000 10869000 10988000 8306100 0 33481 421 30589 281181;281182;281183;281184;281185;281186;281187;281188;281189 222669;222670;222671;222672;222673 222670 5 LVEHFCAEFK Unmodified 1278.6067 0.60669348 3633 Q92598 HSPH1 Heat shock protein 105 kDa yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 63.965 57.971 3 0.018361 75191 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 49.189 40.884 119460000 83931000 24222000 11305000 0 0 0 0 0 0 0 0 0 0 0 0 33482 3633 30590 281190;281191;281192 222674;222675;222676 222674 3 LVEHGLNETIHIR Unmodified 1529.8314 0.83142511 3081 Q7Z3B4 NUP54 Nucleoporin p54 yes yes 0 0 0 By MS/MS 10 0 1 1 49.475 50.186 3 0.04934 55744 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.563 37.795 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33483 3081 30591 281193 222677 222677 1 LVEIAQVPK Unmodified 995.60153 0.60153174 2638 Q16851 UGP2 UTP--glucose-1-phosphate uridylyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.186 56.312 2 0.0073015 64947 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 72.789 44.367 128180000 0 0 0 5693700 4715300 11129000 7313200 6767600 4698900 12823000 14359000 14111000 6238700 14291000 26037000 33484 2638 30592 281194;281195;281196;281197;281198;281199;281200;281201;281202;281203;281204;281205 222678;222679;222680;222681;222682;222683;222684;222685;222686;222687;222688;222689 222688 11 LVEIDNGK Unmodified 886.476 0.47599688 757 P02545 LMNA Prelamin-A/C;Lamin-A/C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 2 1 1 1 1 1 1 1 1 1 1 1 25.541 25.712 2 0.0047759 27878 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 113.7 54.715 998380000 0 0 0 271360000 38615000 50828000 48979000 38663000 31566000 66034000 83465000 98204000 60930000 64610000 145120000 33485 757 30593 281206;281207;281208;281209;281210;281211;281212;281213;281214;281215;281216;281217;281218 222690;222691;222692;222693;222694;222695;222696;222697;222698;222699;222700;222701 222701 8 LVEIVHPSQEEDR Unmodified 1549.7736 0.77363546 2727 Q5H9R7 PPP6R3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 42.587 42.728 3 0.008575 46695 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 31.071 15.909 30722000 0 0 0 5217200 0 0 5238900 0 0 7008300 0 0 0 5306900 7951100 33486 2727 30594 281219;281220;281221;281222;281223 222702 222702 1 LVELLMHNDYK Oxidation (M) 1389.6962 0.69623677 424;1683 P52294;O60684;O15131 KPNA1;KPNA6;KPNA5 Importin subunit alpha-5;Importin subunit alpha-5, N-terminally processed;Importin subunit alpha-7;Importin subunit alpha-6 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 56.107 56.223 3 0.002299 63791 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 52.391 38.99 44675000 0 0 0 6375600 0 10229000 0 0 0 12537000 13632000 0 0 0 1902000 33487 1683;424 30595 281224;281225;281226;281227;281228 222703;222704;222705 222703 535 3 LVELLMHNDYK Unmodified 1373.7013 0.70132214 424;1683 P52294;O60684;O15131 KPNA1;KPNA6;KPNA5 Importin subunit alpha-5;Importin subunit alpha-5, N-terminally processed;Importin subunit alpha-7;Importin subunit alpha-6 no no 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 2 67.767 67.906 2;3 0.0089127 76933 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.986 60.882 32846000 0 0 0 0 1872200 6307800 0 0 0 0 0 0 0 4523600 20142000 33488 1683;424 30595 281229;281230;281231;281232;281233 222706;222707 222707 1 LVELPYTVK Unmodified 1060.6168 0.61684746 4549 Q9NPF4 OSGEP Probable tRNA N6-adenosine threonylcarbamoyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 76.4 71.558 2 0.0043186 90218 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.28 60.124 332050000 7967500 315100000 8981200 0 0 0 0 0 0 0 0 0 0 0 0 33489 4549 30596 281234;281235;281236;281237 222708;222709;222710;222711 222709 3 LVELTQK Unmodified 829.49092 0.49091866 1464 P42704;Q9NP80 LRPPRC;PNPLA8 Leucine-rich PPR motif-containing protein, mitochondrial;Calcium-independent phospholipase A2-gamma yes no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 31.062 30.12 2 0.03372 32300 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 71.715 12.106 652600000 13038000 361900000 5943900 8481500 7412300 10914000 0 19207000 0 24123000 31140000 48182000 27200000 36639000 58419000 33490 1464 30597 281238;281239;281240;281241;281242;281243;281244;281245;281246;281247;281248;281249;281250 222712;222713;222714;222715 222715 4 LVELWGGK Unmodified 900.5069 0.50690308 344 O43592 XPOT Exportin-T yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67.259 66.157 2 0.014324 75461 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 70.67 15.905 218390000 122040000 4607400 25683000 2931000 2250500 8563900 2142700 2891800 0 5700000 6770500 7220400 3064000 6739700 17786000 33491 344 30598 281251;281252;281253;281254;281255;281256;281257;281258;281259;281260;281261;281262;281263;281264 222716;222717;222718;222719;222720;222721;222722;222723;222724;222725;222726 222723 11 LVEMASSLAIR Unmodified 1188.6536 0.65364367 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 49.637 49.916 3 0.049059 56571 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 22.686 0.44922 55976000 0 0 0 0 0 29062000 0 3283900 0 9672600 0 0 0 0 13958000 33492 5189 30599 281265;281266;281267;281268 222727 222727 1 LVENGGMFVCK Oxidation (M) 1268.5893 0.58932885 136 O00267 SUPT5H Transcription elongation factor SPT5 yes yes 0 1 0 By MS/MS 2 0 1 1 46.146 40.698 2 0.0042177 52918 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.149 60.909 24198000 0 24198000 0 0 0 0 0 0 0 0 0 0 0 0 0 33493 136 30600 281269 222728;222729 222728 184 2 LVENGGMFVCK Unmodified 1252.5944 0.59441423 136 O00267 SUPT5H Transcription elongation factor SPT5 yes yes 0 0 0 By MS/MS 2 0 2 2 59.625 53.775 2 1.542E-06 69118 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.52 109.73 83441000 0 83441000 0 0 0 0 0 0 0 0 0 0 0 0 0 33494 136 30600 281270;281271 222730;222731 222730 1 LVEPGSPAEK Unmodified 1025.5393 0.53932542 209 O14745 SLC9A3R1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.12 2.42 1 1 15 2 1 1 2 2 1 2 1 1 1 1 1 1 25.119 24.765 2 0.00055162 26192 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 128.36 100.19 397470000 0 53341000 0 16055000 7937100 50938000 36979000 13560000 36031000 15597000 38009000 29203000 19164000 21486000 59169000 33495 209 30601 281272;281273;281274;281275;281276;281277;281278;281279;281280;281281;281282;281283;281284;281285;281286;281287;281288 222732;222733;222734;222735;222736;222737;222738;222739;222740;222741;222742;222743;222744 222740 12 LVEPLRATCTTK Unmodified 1387.7493 0.74933497 3170 Q86VP6 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 38.185 38.241 3 0.027986 42576 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 27.862 19.349 34437000 0 0 0 2941200 1670000 6324700 2097100 3634300 1832300 0 0 0 0 5268100 10669000 33496 3170 30602 281289;281290;281291;281292;281293;281294;281295;281296 222745 222745 1 LVEPPPQGCQGSVISFPSPR Unmodified 2151.0783 0.078273681 5173 Q9Y3R4 NEU2 Sialidase-2 yes yes 0 0 0 By MS/MS 10 0 1 1 79.159 78.706 3 1.3768E-07 91423 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 56.149 46.895 10416000 0 0 0 10416000 0 0 0 0 0 0 0 0 0 0 0 33497 5173 30603 281297 222746;222747 222747 2 LVEPVGRPSILK Unmodified 1306.7973 0.79727144 1546 P48634 PRRC2A Protein PRRC2A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.656 58.769 3 0.022218 66806 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 27.681 8.8653 113630000 0 0 0 7176400 6282800 5882500 7696000 7076000 5154100 11889000 10356000 15209000 9857000 9371000 17682000 33498 1546 30604 281298;281299;281300;281301;281302;281303;281304;281305;281306;281307;281308;281309 222748 222748 1 LVEQAFR Unmodified 861.47085 0.47085192 2019 P85037 FOXK1 Forkhead box protein K1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 35.012 35.746 2 0.045927 38927 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 66.138 31.245 31366000 0 0 0 0 0 0 0 0 0 0 0 16807000 0 0 14560000 33499 2019 30605 281310;281311 222749 222749 1 LVEQANSPK Unmodified 984.52401 0.52400971 652 O95391 SLU7 Pre-mRNA-splicing factor SLU7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 12.735 12.623 2 0.0036824 11547 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 95.741 18.895 89496000 0 26533000 0 4444600 3888800 4241800 4527800 4426900 3956100 6786500 6124500 6691400 6298100 5100800 6474900 33500 652 30606 281312;281313;281314;281315;281316;281317;281318;281319;281320;281321;281322;281323;281324 222750;222751;222752;222753;222754;222755;222756;222757;222758;222759;222760;222761;222762 222760 13 LVEQLDIEETEQSK Unmodified 1659.8203 0.82031088 3622 Q92552 MRPS27 28S ribosomal protein S27, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 65.715 59.798 2 2.243E-45 76491 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 178.67 138.82 44576000 0 44576000 0 0 0 0 0 0 0 0 0 0 0 0 0 33501 3622 30607 281325 222763 222763 1 LVEQVPDR Unmodified 954.51345 0.51344502 5209 Q9Y4R8 TELO2 Telomere length regulation protein TEL2 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.385 30.574 2 0.0068474 32987 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 94.114 64.776 119390000 0 0 0 6978200 6104600 12693000 7124200 8259400 4993800 10976000 9461600 15450000 10114000 13266000 13966000 33502 5209 30608 281326;281327;281328;281329;281330;281331;281332;281333;281334;281335;281336;281337 222764;222765;222766;222767;222768;222769;222770;222771;222772;222773;222774;222775 222772 12 LVEQYTK Unmodified 879.47018 0.47018322 2539 Q15459 SF3A1 Splicing factor 3A subunit 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.772 20.977 2 0.023334 21231 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 90.777 55.576 606230000 0 0 0 26865000 28127000 35872000 37057000 39903000 31077000 57562000 54850000 71747000 59518000 71510000 92145000 33503 2539 30609 281338;281339;281340;281341;281342;281343;281344;281345;281346;281347;281348;281349 222776;222777;222778;222779;222780;222781;222782;222783;222784;222785;222786 222785 11 LVERLGLEK Unmodified 1055.6339 0.63389451 5288 Q9Y6K9 IKBKG NF-kappa-B essential modulator yes yes 0 0 1 By MS/MS 2 0 1 1 51.677 43.715 2 0.012445 60397 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 128.28 55.492 29866000 29866000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33504 5288 30610 281350 222787 222787 0 LVESDAEAEAVREVYER Unmodified 1963.9487 0.9486993 4268 Q9BZJ0 CRNKL1 Crooked neck-like protein 1 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 69.695 70.021 3 0.0016192 79599 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 52.254 39.217 14971000 0 0 0 0 0 0 0 0 0 0 0 0 0 7123300 7847700 33505 4268 30611 281351;281352 222788;222789;222790 222790 3 LVESDSDINANK Unmodified 1303.6256 0.62557424 3432 Q8NEY1 NAV1 Neuron navigator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 25.357 25.551 2 0.00086266 27151 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 90.15 78.103 23204000 0 0 0 0 0 6652900 0 0 3958600 4529000 0 0 4649100 3413900 0 33506 3432 30612 281353;281354;281355;281356;281357;281358 222791;222792;222793;222794;222795;222796 222792 6 LVESDSDINANKEELLR Unmodified 1943.98 0.97999942 3432 Q8NEY1 NAV1 Neuron navigator 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 56.832 56.88 3 0.00063527 64491 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 45.883 39.979 45546000 0 0 0 5147300 5223400 0 7230500 0 0 0 6634900 0 7868900 6384600 7056000 33507 3432 30613 281359;281360;281361;281362;281363;281364;281365 222797;222798;222799;222800;222801;222802;222803 222797 7 LVESECLQANLVEMLFSED Oxidation (M) 2241.0181 0.018100769 4106 Q9BRA2 TXNDC17 Thioredoxin domain-containing protein 17 yes yes 0 1 0 By MS/MS By MS/MS 2.4 0.49 3 2 3 2 99.836 94.25 2;3 3.1756E-23 118380 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 116.13 104.52 208620000 75565000 133050000 0 0 0 0 0 0 0 0 0 0 0 0 0 33508 4106 30614 281366;281367;281368;281369;281370 222804;222805;222806;222807 222806 5602 3 LVESECLQANLVEMLFSED Unmodified 2225.0232 0.023186147 4106 Q9BRA2 TXNDC17 Thioredoxin domain-containing protein 17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 102.14 97.661 2 4.6955E-87 121365 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 176.51 166.72 171960000 118480000 49702000 3773700 0 0 0 0 0 0 0 0 0 0 0 0 33509 4106 30614 281371;281372;281373;281374;281375 222808;222809;222810;222811;222812;222813 222812 6 LVESGHYASQQIR Unmodified 1486.7528 0.75284044 566 O75962 TRIO Triple functional domain protein yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 29.877 30.091 3 0.02039 32727 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 38.787 22.65 52674000 0 0 0 0 3506500 4195000 6484400 5110400 2609700 6224300 0 5613300 6516600 5471100 6942700 33510 566 30615 281376;281377;281378;281379;281380;281381;281382;281383;281384;281385 222814;222815 222815 1 LVESLPQEIK Unmodified 1154.6547 0.65468953 1703 P52815 MRPL12 39S ribosomal protein L12, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 61.222 60.346 2 0.0035311 76827 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.309 61.417 660080000 0 478570000 4538600 7857100 9707000 11427000 12560000 8376900 8695300 15576000 21764000 18154000 12100000 16131000 34621000 33511 1703 30616 281386;281387;281388;281389;281390;281391;281392;281393;281394;281395;281396;281397;281398;281399;281400 222816;222817;222818;222819;222820;222821;222822;222823;222824;222825 222818 9 LVETLEDQELK Unmodified 1315.6871 0.68711187 632 O95239;Q2VIQ3 KIF4A;KIF4B Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B yes no 0 0 0 By MS/MS 3 0 1 1 59.932 55.112 2 0.036536 67920 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 72.607 40.736 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33512 632 30617 281401 222826 222826 1 LVEVHDPPLHQPSANK Unmodified 1779.9268 0.92678206 594 O94864 SUPT7L STAGA complex 65 subunit gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 40.604 40.783 4 0.016061 44269 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 20.389 10.983 121940000 0 0 0 9044300 6514200 9944200 7391100 0 10760000 9912700 14248000 16256000 10104000 11254000 16510000 33513 594 30618 281402;281403;281404;281405;281406;281407;281408;281409;281410;281411;281412 222827 222827 1 LVEVIEEVNK Unmodified 1170.6496 0.64960415 6 A0MZ66 KIAA1598 Shootin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 62.632 61.288 2 0.0015513 70714 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 93.178 74.639 307890000 23419000 187870000 6639200 2923800 5062300 5246900 5968200 4057800 5744000 8153000 10779000 8678100 6007300 7006400 20341000 33514 6 30619 281413;281414;281415;281416;281417;281418;281419;281420;281421;281422;281423;281424;281425;281426;281427;281428 222828;222829;222830;222831;222832;222833;222834;222835;222836;222837;222838;222839;222840;222841;222842;222843;222844 222844 16 LVEVNGENVEK Unmodified 1228.6299 0.62993134 209 O14745 SLC9A3R1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 35.14 35.656 2 0.00026373 38280 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 91.867 50.437 11990000 0 0 0 0 0 0 0 0 0 0 0 0 0 3278300 8711400 33515 209 30620 281429;281430;281431 222845;222846;222847 222846 3 LVFAPADEPR Unmodified 1113.5819 0.58185893 3146 Q86UD0 SAPCD2 Suppressor APC domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 57.659 57.872 2 0.0036206 66153 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 75.825 49.931 5915800 0 0 0 0 0 0 0 0 0 0 0 0 5915800 0 0 33516 3146 30621 281432;281433;281434 222848;222849;222850 222849 3 LVFDEYLK Unmodified 1025.5433 0.54334816 857 P08133 ANXA6 Annexin A6 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 78.155 78.205 2 0.039356 90437 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 50.703 31.898 20925000 0 0 0 0 3956300 0 0 2935900 4670800 4236400 0 0 5125800 0 0 33517 857 30622 281435;281436;281437;281438;281439 222851;222852 222852 2 LVFGFLNGR Unmodified 1021.5709 0.57090032 728 P00491 PNP Purine nucleoside phosphorylase yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 84.302 84.46 2 0.00508 97523 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.244 76.893 15143000 0 0 0 0 0 0 0 0 0 0 0 2509800 0 0 12633000 33518 728 30623 281440;281441 222853 222853 1 LVFIGDTLSR Unmodified 1119.6288 0.62880913 1788 P56945 BCAR1 Breast cancer anti-estrogen resistance protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 78.07 78.155 2 0.0088751 90287 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 58.981 29.831 67789000 0 0 0 4153800 0 7157000 5814900 5722200 0 7567200 6189500 9195600 6441800 6844100 8702400 33519 1788 30624 281442;281443;281444;281445;281446;281447;281448;281449;281450;281451 222854;222855;222856;222857;222858;222859;222860;222861 222854 8 LVFLEDGTSQVRK Unmodified 1490.8093 0.80929269 3238 Q8IWC1 MAP7D3 MAP7 domain-containing protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 59.68 59.762 3 0.0027778 67440 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 52.495 40.519 60673000 0 0 0 4365900 5384700 5734300 0 6161600 6514900 4261500 0 8929100 4659600 4987600 9673600 33520 3238 30625 281452;281453;281454;281455;281456;281457;281458;281459;281460;281461 222862;222863;222864;222865;222866;222867 222866 6 LVFLGEQSVGK Unmodified 1175.655 0.65502388 1105;4611 P20340;Q9NRW1 RAB6A;RAB6B Ras-related protein Rab-6A;Ras-related protein Rab-6B no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 70.652 69.942 2 0.0070215 80026 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 55.084 26.357 309510000 0 43412000 16423000 11352000 12296000 15532000 16526000 24459000 10481000 28332000 27974000 27893000 19824000 17671000 37335000 33521 1105;4611 30626 281462;281463;281464;281465;281466;281467;281468;281469;281470;281471;281472;281473;281474;281475;281476 222868;222869;222870;222871;222872;222873;222874;222875;222876;222877 222868 9 LVFLGLDNAGK Unmodified 1145.6445 0.64445919 4589;5274 Q9NR31;Q9Y6B6 SAR1A;SAR1B GTP-binding protein SAR1a;GTP-binding protein SAR1b no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.15 3.34 7 1 26 3 3 2 3 2 2 2 3 2 2 2 2 2 2 2 80.774 80.026 1;2 8.1825E-09 91745 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 155.07 130.14 5421000000 800640000 198870000 227430000 205080000 163340000 264510000 296460000 283900000 257420000 412740000 404370000 455000000 326650000 294600000 829980000 33522 4589;5274 30627 281477;281478;281479;281480;281481;281482;281483;281484;281485;281486;281487;281488;281489;281490;281491;281492;281493;281494;281495;281496;281497;281498;281499;281500;281501;281502;281503;281504;281505;281506;281507;281508;281509;281510 222878;222879;222880;222881;222882;222883;222884;222885;222886;222887;222888;222889;222890;222891;222892;222893;222894;222895;222896;222897;222898;222899;222900;222901;222902;222903 222895 23 LVFSNVNLK Unmodified 1032.5968 0.59678072 2608 Q16531 DDB1 DNA damage-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 70.334 69.155 2 0.00043486 85792 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 125.25 54.34 1280900000 537720000 254420000 77281000 15291000 14871000 18958000 16757000 20416000 13347000 38411000 41272000 51536000 24195000 54829000 101640000 33523 2608 30628 281511;281512;281513;281514;281515;281516;281517;281518;281519;281520;281521;281522;281523;281524;281525;281526 222904;222905;222906;222907;222908;222909;222910;222911;222912;222913;222914;222915;222916;222917;222918 222913 10 LVGAGAAAGESCPDAPRAPQTSSQR Unmodified 2453.1717 0.17173315 3931 Q96N21 ENTHD2 AP-4 complex accessory subunit tepsin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.78 40.958 3 1.402E-90 45661 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 133.38 125.58 299970000 0 0 0 11062000 17967000 20453000 20032000 22821000 17241000 28059000 28683000 43833000 27733000 24772000 37311000 33524 3931 30629 281527;281528;281529;281530;281531;281532;281533;281534;281535;281536;281537;281538 222919;222920;222921;222922;222923;222924;222925;222926;222927;222928;222929;222930;222931 222925 12 LVGDFTHDQSISQK Unmodified 1573.7736 0.77363546 3643 Q92621 NUP205 Nuclear pore complex protein Nup205 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 46.895 45.612 3 0.00013301 51206 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 74.769 60.739 275280000 7408000 83390000 25464000 7867600 8801600 16012000 11710000 14585000 7907400 15210000 12020000 20391000 12138000 14093000 18286000 33525 3643 30630 281539;281540;281541;281542;281543;281544;281545;281546;281547;281548;281549;281550;281551;281552;281553;281554 222932;222933;222934;222935;222936;222937;222938;222939;222940;222941;222942;222943;222944;222945;222946;222947 222940 16 LVGEDAPK Unmodified 827.43888 0.43888309 4814 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 17.043 17.323 2 0.018051 17224 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 64.757 26.387 158300000 0 0 0 0 0 12556000 13040000 0 0 14953000 21012000 32177000 22381000 18869000 23308000 33526 4814 30631 281555;281556;281557;281558;281559;281560;281561;281562 222948;222949;222950 222950 3 LVGEIKEEEK Unmodified 1172.6289 0.62886871 5131 Q9Y2Z0 SUGT1 Suppressor of G2 allele of SKP1 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.44 3.62 4 2 12 1 3 2 1 1 1 1 1 1 1 1 1 1 1 1 25.518 24.286 2;3 0.00017163 30316 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 175.91 121.76 705100000 33210000 278400000 215640000 10187000 8677700 9155900 15626000 11926000 9286900 14713000 19064000 23517000 14290000 12999000 28409000 33527 5131 30632 281563;281564;281565;281566;281567;281568;281569;281570;281571;281572;281573;281574;281575;281576;281577;281578;281579;281580 222951;222952;222953;222954;222955;222956;222957;222958;222959;222960;222961;222962;222963;222964;222965 222958 8 LVGEIMQETGTR Oxidation (M) 1348.6657 0.66566492 2033 Q00341 HDLBP Vigilin yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 2 2 2 2 2 1 2 1 2 2 2 39.062 39.247 2 8.127E-06 43101 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 107.79 88.694 154930000 0 0 0 3443800 10665000 13670000 14727000 7458900 10397000 10564000 20862000 10671000 15770000 13415000 23285000 33528 2033 30633 281581;281582;281583;281584;281585;281586;281587;281588;281589;281590;281591;281592;281593;281594;281595;281596;281597;281598;281599;281600;281601 222966;222967;222968;222969;222970;222971;222972;222973;222974;222975;222976;222977;222978 222973 3291 13 LVGEIMQETGTR Unmodified 1332.6708 0.6707503 2033 Q00341 HDLBP Vigilin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 56.299 56.11 2 0.0092782 64208 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 58.699 37.829 34861000 0 0 0 7167400 6581600 0 0 0 0 0 0 0 10875000 10237000 0 33529 2033 30633 281602;281603;281604;281605 222979;222980;222981 222981 3 LVGEPVLGAK Unmodified 981.58588 0.58588168 2540 Q15477 SKIV2L Helicase SKI2W yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 49.998 50.221 2 0.014223 55708 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.465 34.162 8430100 0 0 0 0 0 0 0 0 0 0 0 0 0 8430100 0 33530 2540 30634 281606;281607 222982;222983 222982 2 LVGIISSR Unmodified 843.5178 0.51780212 964 P12268 IMPDH2 Inosine-5'-monophosphate dehydrogenase 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 48.29 48.462 2 0.013011 53943 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.324 15.13 347340000 0 0 0 15904000 13561000 0 18896000 21429000 12897000 24582000 45868000 54153000 23899000 38150000 77997000 33531 964 30635 281608;281609;281610;281611;281612;281613;281614;281615;281616;281617;281618 222984;222985;222986 222986 3 LVGITPQVMK Unmodified 1084.6315 0.63145166 3324 Q8N3P4 VPS8 Vacuolar protein sorting-associated protein 8 homolog yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 73.714 66.876 2 0.0041356 87574 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 91.069 74.292 57103000 23823000 33280000 0 0 0 0 0 0 0 0 0 0 0 0 0 33532 3324 30636 281619;281620 222987;222988 222988 2 LVGIVTSR Unmodified 843.5178 0.51780212 1114 P20839 IMPDH1 Inosine-5'-monophosphate dehydrogenase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 42.593 42.963 2 0.019937 46935 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 63.21 11.638 86909000 0 0 0 0 0 0 7389200 0 4389000 5980800 13943000 17577000 0 9954300 27675000 33533 1114 30637 281621;281622;281623;281624;281625;281626;281627 222989 222989 1 LVGLEAPSVR Unmodified 1039.6026 0.60259438 3398 Q8NBN7 RDH13 Retinol dehydrogenase 13 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.734 61.834 2 0.003407 70362 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 76.605 40.035 237690000 0 0 0 12864000 13459000 16429000 17646000 17415000 17458000 18878000 24660000 27385000 25028000 17376000 29089000 33534 3398 30638 281628;281629;281630;281631;281632;281633;281634;281635;281636;281637;281638;281639 222990;222991;222992;222993;222994;222995;222996;222997;222998;222999 222995 10 LVGPEEALSPGEAR Unmodified 1423.7307 0.73070802 414 O60568 PLOD3 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.902 59.023 2 0.0005556 66363 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.397 69.19 70417000 0 0 0 5629700 3879800 0 4975900 4475000 4973600 5031700 8159400 8384100 6016900 6355100 12536000 33535 414 30639 281640;281641;281642;281643;281644;281645;281646;281647;281648;281649;281650;281651 223000;223001;223002;223003;223004;223005;223006;223007;223008;223009;223010;223011 223003 12 LVGPEGFVVTEAGFGADIGMEK Oxidation (M) 2238.0878 0.087835314 953 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 2 3 2 94.014 89.562 2;3 6.6955E-20 111563 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.61 90.472 266550000 135140000 105010000 26408000 0 0 0 0 0 0 0 0 0 0 0 0 33536 953 30640 281652;281653;281654;281655;281656;281657;281658 223012;223013;223014;223015;223016;223017;223018 223014 1232 6 LVGPEGFVVTEAGFGADIGMEK Unmodified 2222.0929 0.092920692 953 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.5 0.5 3 3 2 3 1 95.835 91.6 2;3 3.5753E-26 114584 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.75 104.94 198180000 162810000 30846000 4518800 0 0 0 0 0 0 0 0 0 0 0 0 33537 953 30640 281659;281660;281661;281662;281663;281664 223019;223020;223021;223022;223023;223024;223025 223023 7 LVGQGASAVLLDLPNSGGEAQAK Unmodified 2194.1594 0.15936077 4051 Q99714 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 2 2 2 2 1 1 2 82.708 82.768 2;3 3.2143E-20 96060 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 116.96 111.98 133040000 0 0 0 2660600 5788800 6302800 6671900 9737200 4804000 11753000 16937000 19353000 10038000 8601600 30395000 33538 4051 30641 281665;281666;281667;281668;281669;281670;281671;281672;281673;281674;281675;281676;281677;281678;281679;281680;281681;281682;281683;281684;281685;281686 223026;223027;223028;223029;223030;223031;223032;223033;223034;223035;223036 223036 11 LVGQSIIAYLQK Unmodified 1331.7813 0.78128702 1721 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 86.354 86.496 2 0.00012083 100009 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.308 45.199 19932000 0 0 0 0 0 2833900 0 2087300 0 3022400 1689900 0 0 0 10298000 33539 1721 30642 281687;281688;281689;281690;281691 223037;223038;223039;223040 223039 4 LVGSEVGDR Unmodified 930.47706 0.47705951 2422 Q14653 IRF3 Interferon regulatory factor 3 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 20.662 20.875 2 0.0051376 21862 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 82.452 57.933 126780000 0 0 0 6392800 5664300 8801700 0 8559100 6784000 13644000 2022900 20405000 21788000 0 32719000 33540 2422 30643 281692;281693;281694;281695;281696;281697;281698;281699;281700;281701 223041;223042;223043;223044;223045 223041 5 LVGSQEELASWGHEYVR Unmodified 1958.9486 0.94863972 2252 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 74.572 74.714 3 0.00050433 86073 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 54.368 47.616 42564000 0 0 0 0 0 0 0 0 0 21831000 15900000 0 4833100 0 0 33541 2252 30644 281702;281703;281704 223046;223047 223046 2 LVGSVNLFSDENVPR Unmodified 1644.8471 0.84713476 4096 Q9BQG0 MYBBP1A Myb-binding protein 1A yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 80.332 80.478 2 5.955E-08 92294 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 91.03 76.872 4824600 0 0 0 0 0 0 0 0 1557400 0 0 0 0 3267200 0 33542 4096 30645 281705;281706 223048;223049 223049 2 LVGTAHLK Unmodified 837.50724 0.50723743 2765 Q5T0F9 CC2D1B Coiled-coil and C2 domain-containing protein 1B yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 23.657 19.685 2 0.021921 28193 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.097 21.382 63470000 54820000 0 8650300 0 0 0 0 0 0 0 0 0 0 0 0 33543 2765 30646 281707;281708 223050 223050 1 LVGTPGAELLK Unmodified 1096.6492 0.64921022 2611 Q16539 MAPK14 Mitogen-activated protein kinase 14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 66.042 66.178 2 0.0044032 74934 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.56 37.53 93702000 0 0 0 7099900 0 6748400 6688700 5754800 0 8573900 15492000 8868800 6672800 8754000 19049000 33544 2611 30647 281709;281710;281711;281712;281713;281714;281715;281716;281717;281718 223051;223052;223053;223054;223055;223056;223057;223058 223053 8 LVGTPNPSTPLPNTVPQFIAR Unmodified 2218.211 0.21100241 3707 Q93062 RBPMS RNA-binding protein with multiple splicing yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 2 2 2 2 1 2 2 2 1 2 2 86.427 86.532 2;3 2.7852E-13 99619 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 77.912 64.775 137240000 0 0 0 0 7017600 9683600 8523100 11133000 4802300 18427000 11883000 14762000 4708200 9047900 37249000 33545 3707 30648 281719;281720;281721;281722;281723;281724;281725;281726;281727;281728;281729;281730;281731;281732;281733;281734;281735;281736;281737;281738 223059;223060;223061;223062;223063;223064;223065;223066;223067;223068;223069;223070;223071;223072;223073 223069 13 LVGYLDRNLEK Unmodified 1318.7245 0.72450043 844 P07602 PSAP Prosaposin;Saposin-A;Saposin-B-Val;Saposin-B;Saposin-C;Saposin-D yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 8.55 3.09 2 9 2 2 1 1 1 1 1 1 1 54.57 53.007 2;3 0.0043631 59669 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 49.466 29.907 143330000 55325000 0 0 32859000 4865000 11245000 5505700 11588000 0 17170000 3144800 0 1630400 0 0 33546 844 30649 281739;281740;281741;281742;281743;281744;281745;281746;281747;281748;281749 223074;223075;223076;223077;223078;223079;223080;223081;223082;223083;223084;223085 223082 11 LVHANFGTK Unmodified 985.53451 0.53451481 762 P02786 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 25.068 25.057 2 0.031872 25178 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 47.574 27.019 5485200 0 0 0 0 2569800 0 0 0 0 0 0 0 0 2915300 0 33547 762 30650 281750;281751 223086 223086 1 LVHEGPLTWR Unmodified 1206.6509 0.65094155 3679 Q92888 ARHGEF1 Rho guanine nucleotide exchange factor 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 55.918 56.216 3 0.006069 62830 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.705 34.394 57730000 0 0 0 0 0 13058000 0 0 6146900 0 8550800 0 9630100 0 20345000 33548 3679 30651 281752;281753;281754;281755;281756 223087;223088 223087 2 LVHPGVAEVVFVK Unmodified 1392.8129 0.8129215 4243 Q9BY77 POLDIP3 Polymerase delta-interacting protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 17 1 1 2 1 2 2 1 2 2 2 1 72.833 73.004 2;3 0.00060422 83271 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 54.7 45.97 171740000 0 0 0 0 0 5496000 0 0 28054000 28420000 26015000 33645000 23957000 21183000 4966400 33549 4243 30652 281757;281758;281759;281760;281761;281762;281763;281764;281765;281766;281767;281768;281769;281770;281771;281772;281773 223089;223090;223091;223092;223093;223094;223095;223096;223097;223098;223099;223100 223095 10 LVHPTDK Unmodified 808.4443 0.44430282 3050 Q7L576;Q96F07 CYFIP1;CYFIP2 Cytoplasmic FMR1-interacting protein 1;Cytoplasmic FMR1-interacting protein 2 yes no 0 0 0 By MS/MS By matching By matching 2 0 3 1 1 1 8.5729 5.5327 2 0.027431 9452 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.473 54.699 317730000 120460000 79017000 118250000 0 0 0 0 0 0 0 0 0 0 0 0 33550 3050 30653 281774;281775;281776 223101 223101 1 LVHSNLEDDPEEIR Unmodified 1664.8006 0.8005785 4438 Q9H7X7 IFT22 Intraflagellar transport protein 22 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 23.911 24.369 4 0.048861 25646 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 18.731 9.4489 49476000 0 0 0 0 0 0 0 0 0 0 8420600 0 12232000 10079000 18745000 33551 4438 30654 281777;281778;281779;281780 223102 223102 1 LVICPDEGFYK Unmodified 1339.6482 0.64822394 1831 P61081 UBE2M NEDD8-conjugating enzyme Ubc12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 74.969 73.728 2 5.0576E-09 93611 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 128.36 101.98 2172400000 83123000 1744800000 42151000 11482000 19644000 39792000 19914000 23230000 18682000 38442000 0 26894000 22769000 37041000 44459000 33552 1831 30655 281781;281782;281783;281784;281785;281786;281787;281788;281789;281790;281791;281792;281793;281794;281795 223103;223104;223105;223106;223107;223108;223109;223110;223111;223112;223113;223114;223115;223116 223109 9 LVIDEPAK Unmodified 883.50148 0.50148335 1674 P51858 HDGF Hepatoma-derived growth factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.56 3.64 1 2 2 11 2 2 1 1 1 1 1 1 1 1 1 1 1 1 39.659 38.496 2 0.009506 43085 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 82.671 29.117 11686000000 7489900 10046000000 153500000 62298000 51450000 53341000 50166000 71580000 37501000 86466000 331080000 0 61767000 143430000 529760000 33553 1674 30656 281796;281797;281798;281799;281800;281801;281802;281803;281804;281805;281806;281807;281808;281809;281810;281811 223117;223118;223119;223120;223121;223122;223123;223124;223125;223126;223127;223128 223118 12 LVIDQIDNGFFSPK Unmodified 1591.8246 0.8246084 828 P06737 PYGL Glycogen phosphorylase, liver form yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 91.365 87.68 2 1.9548E-06 108942 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.51 101.64 47947000 0 46126000 1820900 0 0 0 0 0 0 0 0 0 0 0 0 33554 828 30657 281812;281813 223129;223130 223129 1 LVIDVIR Unmodified 826.52764 0.52763852 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.458 71.53 2 0.02342 81624 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.086 25.299 94038000 0 0 0 4437300 3484800 9563100 7113700 4864200 5870600 10378000 8752500 13033000 5023600 7831600 13685000 33555 2431 30658 281814;281815;281816;281817;281818;281819;281820;281821;281822;281823;281824;281825 223131;223132 223132 2 LVIEEAER Unmodified 957.51311 0.51311067 1642 P50991 CCT4 T-complex protein 1 subunit delta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 38.27 38.51 2 1.0885E-08 41634 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 164.53 25.91 1878400000 0 0 0 0 124280000 183140000 144510000 135810000 78848000 192230000 188070000 220140000 123620000 168700000 319000000 33556 1642 30659 281826;281827;281828;281829;281830;281831;281832;281833;281834;281835;281836 223133;223134;223135;223136;223137;223138;223139;223140;223141;223142;223143;223144 223137 9 LVIIEGDLERTEER Unmodified 1670.8839 0.88391419 831 P06753 TPM3 Tropomyosin alpha-3 chain yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 66.411 66.676 3 0.010629 76908 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 37.156 10.127 35282000 0 0 0 0 0 3841300 0 0 0 0 3626800 6502800 3675000 4488100 13148000 33557 831 30660 281837;281838;281839;281840;281841;281842 223145;223146;223147;223148;223149 223148 5 LVIITAGAR Unmodified 912.57565 0.57565135 719 P00338 LDHA L-lactate dehydrogenase A chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 1 1 1 1 1 1 2 3 1 1 2 54.291 54.538 2 1.4085E-05 60685 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 157.21 73.832 1134500000 0 0 0 37396000 14105000 15256000 19791000 21577000 9509000 21437000 172120000 180480000 19532000 82799000 540490000 33558 719 30661 281843;281844;281845;281846;281847;281848;281849;281850;281851;281852;281853;281854;281855;281856;281857;281858 223150;223151;223152;223153;223154;223155;223156;223157;223158;223159;223160;223161 223157 6 LVILANNCPALRK Unmodified 1480.8548 0.85480309 1924 P62888 RPL30 60S ribosomal protein L30 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 61.066 61.171 3 0.0040132 70183 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 42.031 36.547 60381000 0 0 0 0 3435100 5551900 2845800 11451000 0 0 0 0 12700000 10919000 13479000 33559 1924 30662 281859;281860;281861;281862;281863;281864;281865 223162;223163;223164 223164 3 LVILDEADAMTQDAQNALR Oxidation (M) 2102.0314 0.031383068 1424 P40937 RFC5 Replication factor C subunit 5 yes yes 0 1 0 By MS/MS 10 0 1 1 79.966 80.064 2 0.0037088 92577 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 43.544 32.934 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33560 1424 30663 281866 223165 223165 2243 1 LVILEGELER Unmodified 1169.6656 0.66558856 1957;853;90 CON__Q3SX28;P07951;P67936 TPM2;TPM4 Tropomyosin beta chain;Tropomyosin alpha-4 chain no no 0 0 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.374 75.433 2 0.016762 86897 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.96 33.037 + 56793000 0 0 0 2167400 1876300 2769700 1830000 1660000 3233700 3299000 6246800 7787000 2312300 6650500 16960000 33561 90;853;1957 30664 281867;281868;281869;281870;281871;281872;281873;281874;281875;281876;281877;281878 223166;223167;223168;223169 223169 3 LVILEGELERAEER Unmodified 1654.889 0.88899957 1957 P67936 TPM4 Tropomyosin alpha-4 chain yes yes 0 0 1 By matching By MS/MS By MS/MS 10 0 3 1 1 1 74.986 75.207 3 0.0003955 86157 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.487 41.408 24311000 0 0 0 0 0 0 0 0 0 0 1827300 0 0 2806800 19677000 33562 1957 30665 281879;281880;281881 223170 223170 1 LVILEGELERAEERAEVSELK Unmodified 2411.2908 0.29076888 1957 P67936 TPM4 Tropomyosin alpha-4 chain yes yes 0 0 2 By MS/MS By MS/MS 2.33 0.667 1 4 4 6 3 91.531 87.35 3;4 6.3528E-48 95852 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 133.21 120.73 1048300000 970220000 78040000 0 0 0 0 0 0 0 0 0 0 0 0 0 33563 1957 30666 281882;281883;281884;281885;281886;281887;281888;281889;281890 223171;223172;223173;223174;223175;223176;223177;223178 223175 8 LVILEGELERSEERAEVAESK Unmodified 2385.2387 0.23873331 853 P07951 TPM2 Tropomyosin beta chain yes yes 0 0 2 By MS/MS 2.33 0.471 2 1 3 79.815 73.113 3;4 0.00030157 94977 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.383 18.271 359260000 359260000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33564 853 30667 281891;281892;281893 223179;223180;223181 223181 3 LVILEGELERSEERAEVAESR Unmodified 2413.2449 0.24488132 90 CON__Q3SX28 yes yes 0 0 2 By MS/MS 2 0 2 2 81.206 73.075 3;4 2.5368E-13 95709 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.849 76.045 + 114220000 114220000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33565 90 30668 281894;281895 223182;223183 223182 1 LVINGNPITIFQER Unmodified 1612.8937 0.89369102 782 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 89.034 89.178 2 1.078E-05 103467 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.548 72.522 78753000 0 0 0 0 0 0 0 0 0 0 8214100 7062300 0 4610000 58867000 33566 782 30669 281896;281897;281898;281899;281900 223184;223185;223186;223187;223188 223185 5 LVINGNPITIFQERDPSK Unmodified 2040.1004 0.10038933 782 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.46 3.86 8 3 13 5 5 1 1 1 1 1 1 2 2 2 2 86.077 84.579 2;3 1.5075E-73 97673 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 162.72 147.69 3525200000 475510000 886410000 286740 20385000 0 33347000 6653100 30197000 22591000 0 148310000 128730000 0 92440000 1680300000 33567 782 30670 281901;281902;281903;281904;281905;281906;281907;281908;281909;281910;281911;281912;281913;281914;281915;281916;281917;281918;281919;281920;281921;281922;281923;281924 223189;223190;223191;223192;223193;223194;223195;223196;223197;223198;223199;223200;223201;223202;223203;223204;223205;223206;223207;223208;223209;223210;223211;223212 223198 20 LVINSGNGAVEDR Unmodified 1342.6841 0.68409218 1031 P16070 CD44 CD44 antigen yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 40.445 40.569 2 0.00056132 44569 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 91.855 81.826 7227100 0 0 0 2190200 0 0 0 0 0 0 0 5037000 0 0 0 33568 1031 30671 281925;281926 223213 223213 1 LVINTEEVFRPYAK Unmodified 1677.909 0.90900673 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 1 79.281 78.088 3 9.0502E-14 89625 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 111.79 106.08 505780000 220550000 30720000 3274700 0 5985100 24056000 6904100 12898000 18939000 21037000 16406000 21737000 8062600 19979000 95229000 33569 1986 30672 281927;281928;281929;281930;281931;281932;281933;281934;281935;281936;281937;281938;281939;281940;281941 223214;223215;223216;223217;223218;223219;223220;223221;223222;223223;223224;223225;223226;223227;223228 223219 14 LVIPLVVHSAQK Unmodified 1302.8024 0.80235682 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 74.04 74.1 3 0.0022077 84601 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.301 51.556 251980000 0 0 0 13405000 12257000 25239000 13607000 27949000 14743000 23537000 18269000 28625000 17611000 18777000 37965000 33570 2804 30673 281942;281943;281944;281945;281946;281947;281948;281949;281950;281951;281952;281953;281954 223229;223230;223231;223232;223233;223234;223235;223236;223237;223238;223239;223240;223241;223242 223232 13 LVIPSELGYGER Unmodified 1331.7085 0.70851601 1212 P26885 FKBP2 Peptidyl-prolyl cis-trans isomerase FKBP2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.41 76.468 2 1.8487E-06 88287 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 114.4 96.965 228950000 0 0 0 7239800 7713000 10395000 11197000 13040000 9049200 16030000 30611000 32032000 9308900 20420000 61912000 33571 1212 30674 281955;281956;281957;281958;281959;281960;281961;281962;281963;281964;281965;281966 223243;223244;223245;223246;223247;223248;223249;223250;223251;223252;223253;223254 223253 12 LVIPSELGYGERGAPPK Unmodified 1781.9676 0.96758424 1212 P26885 FKBP2 Peptidyl-prolyl cis-trans isomerase FKBP2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 77.017 71.528 3 2.9122E-05 88325 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 75.911 72.606 285460000 262950000 0 22517000 0 0 0 0 0 0 0 0 0 0 0 0 33572 1212 30675 281967;281968;281969 223255;223256;223257;223258 223258 4 LVISHEEELIPLHK Unmodified 1655.9247 0.9246568 199 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 71.819 70.646 3 0.026151 80399 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 30.483 24.579 28290000 11498000 0 0 0 0 1580500 0 0 1630400 2125900 0 4058600 0 0 7397400 33573 199 30676 281970;281971;281972;281973;281974;281975 223259;223260;223261 223260 3 LVIVGDGACGK Unmodified 1087.5696 0.56957969 1851;858 P08134;P61586 RHOC;RHOA Rho-related GTP-binding protein RhoC;Transforming protein RhoA no no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.16 3.73 5 2 12 2 4 1 1 1 1 1 1 1 1 1 1 1 1 1 44.853 43.518 2 0.00032067 56032 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.98 91.592 1411400000 0 910510000 24767000 27985000 22630000 22736000 31756000 49495000 16382000 51929000 92548000 29718000 36874000 32221000 61848000 33574 858;1851 30677 281976;281977;281978;281979;281980;281981;281982;281983;281984;281985;281986;281987;281988;281989;281990;281991;281992;281993;281994 223262;223263;223264;223265;223266;223267;223268;223269;223270;223271;223272;223273;223274;223275;223276;223277;223278;223279 223265 16 LVIVHPEVTVK Unmodified 1232.7493 0.74925861 1794 P57678 GEMIN4 Gem-associated protein 4 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 60.318 60.479 3 0.012871 68572 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 42.788 36.468 117130000 0 0 0 1253100 0 10583000 8101300 8866400 6376100 13584000 8761600 14036000 9789600 13599000 22180000 33575 1794 30678 281995;281996;281997;281998;281999;282000;282001;282002;282003;282004;282005 223280;223281;223282;223283 223283 4 LVIVNGDDPLSR Unmodified 1296.7038 0.70376498 1179 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 70.588 70.651 2 0.0045551 81265 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 71.451 56.3 49896000 0 0 0 1428800 2215400 5819600 2099500 3892800 0 7020100 3360600 6369700 5665800 3646100 8377700 33576 1179 30679 282006;282007;282008;282009;282010;282011;282012;282013;282014;282015;282016 223284;223285;223286;223287;223288;223289;223290;223291;223292 223285 9 LVLACEDVR Unmodified 1073.5539 0.55392962 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.394 49.552 2 0.0031541 55789 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 92.439 54.353 386280000 0 0 0 20926000 26860000 22706000 39588000 23521000 32207000 33201000 41022000 43433000 41011000 25163000 36644000 33577 2556 30680 282017;282018;282019;282020;282021;282022;282023;282024;282025;282026;282027;282028 223293;223294;223295;223296;223297;223298;223299;223300;223301;223302;223303;223304;223305;223306 223298 14 LVLADGVSYACK Unmodified 1294.6591 0.65912298 3417 Q8NDH3 NPEPL1 Probable aminopeptidase NPEPL1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 63.115 63.501 2 0.0177 71946 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.518 44.856 13181000 0 0 0 0 0 0 0 0 0 0 0 0 0 3493600 9687500 33578 3417 30681 282029;282030 223307 223307 0 LVLADLLEPVK Unmodified 1208.738 0.73802523 4189 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 92.848 92.33 2 6.7931E-05 114991 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.22 93.948 31606000 0 18928000 930580 0 868260 950640 822230 757460 1124300 2072500 1648600 1213500 815490 1475000 0 33579 4189 30682 282031;282032;282033;282034;282035;282036;282037;282038;282039;282040;282041;282042;282043 223308;223309;223310;223311;223312;223313;223314;223315 223310 8 LVLDEDEETK Unmodified 1189.5714 0.57141341 1498 P46100 ATRX Transcriptional regulator ATRX yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 38.315 38.046 2 0.0047016 47116 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.37 71.005 115380000 0 55039000 0 2579800 2847200 5885700 3631700 5389800 4271400 5822400 5846800 4628800 10881000 0 8552800 33580 1498 30683 282044;282045;282046;282047;282048;282049;282050;282051;282052;282053;282054;282055;282056 223316;223317;223318;223319;223320;223321;223322;223323;223324 223319 9 LVLDPGEAPLVPVYSGK Unmodified 1752.9662 0.96618726 3409 Q8NCF5 NFATC2IP NFATC2-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 86.535 86.604 2 3.9214E-36 100444 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 151.44 136.56 366670000 0 0 0 11283000 26478000 28575000 23832000 22918000 28358000 49610000 41118000 47493000 14321000 24779000 47903000 33581 3409 30684 282057;282058;282059;282060;282061;282062;282063;282064;282065;282066;282067;282068 223325;223326;223327;223328;223329;223330;223331;223332;223333;223334;223335;223336;223337 223330 13 LVLDPYLLK Unmodified 1072.6532 0.65323296 5114 Q9Y2R5 MRPS17 28S ribosomal protein S17, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 84.636 84.697 2 0.028187 97748 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.097 42.334 23296000 0 0 0 0 2000600 3313800 0 0 0 0 2935600 0 3985800 4273300 6787200 33582 5114 30685 282069;282070;282071;282072;282073;282074 223338 223338 1 LVLDTVNEVSR Unmodified 1243.6772 0.67721588 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 61.099 61.356 2 0.010035 70213 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 61.78 43.455 47172000 0 0 0 0 0 5743800 3158900 0 2870700 5881400 8060700 10072000 0 3470400 7914500 33583 5049 30686 282075;282076;282077;282078;282079;282080;282081;282082 223339;223340;223341;223342 223339 4 LVLEHSKDDDNLDSLLDSVVGLK Unmodified 2523.3068 0.30681287 2863 Q69YN4 KIAA1429 Protein virilizer homolog yes yes 0 0 1 By MS/MS 2 0 1 1 98.12 89.989 4 1.7071E-13 116148 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.644 59.368 23236000 23236000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33584 2863 30687 282083 223343 223343 1 LVLEQGDSSEILSK Unmodified 1516.7985 0.79845323 2808 Q5VT06 CEP350 Centrosome-associated protein 350 yes yes 0 0 0 By MS/MS 2 0 1 1 71.847 66.12 2 9.9099E-06 84011 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.22 94.913 15494000 0 15494000 0 0 0 0 0 0 0 0 0 0 0 0 0 33585 2808 30688 282084 223344;223345 223344 2 LVLEQVVTSIASVADTAEEK Unmodified 2101.1154 0.11543027 149 O00410 IPO5 Importin-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 3.92 3.36 1 7 2 3 3 5 2 1 1 1 100.62 98.049 2;3 8.7847E-92 95246 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 161.51 151.59 1265600000 331360000 912810000 16117000 1057500 0 0 0 0 0 2671500 0 0 0 0 1590200 33586 149 30689 282085;282086;282087;282088;282089;282090;282091;282092;282093;282094;282095;282096;282097 223346;223347;223348;223349;223350;223351;223352;223353;223354;223355;223356 223352 10 LVLETLSK Unmodified 901.54843 0.54843354 183 O14497 ARID1A AT-rich interactive domain-containing protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.148 56.275 2 0.012186 63610 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 75.213 47.039 123930000 0 0 0 7827000 8706300 8583000 10078000 8443200 5794300 12801000 12052000 15280000 9911900 10538000 13911000 33587 183 30690 282098;282099;282100;282101;282102;282103;282104;282105;282106;282107;282108;282109 223357;223358;223359;223360;223361;223362;223363 223360 7 LVLEVLQK Unmodified 940.59572 0.59571809 311 O43264 ZW10 Centromere/kinetochore protein zw10 homolog yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 72.013 72.228 2 0.015495 82268 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 68.787 6.0696 19597000 0 0 0 0 0 0 1671800 0 0 3594300 2332900 3517700 2328500 2395600 3755800 33588 311 30691 282110;282111;282112;282113;282114;282115;282116 223364;223365 223364 2 LVLILNK Unmodified 811.55312 0.55312499 4195 Q9BVP2 GNL3 Guanine nucleotide-binding protein-like 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 67.268 67.418 2 0.023434 77413 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 85.306 38.261 63895000 0 0 0 0 4117200 6612500 5757000 4684800 3442200 7202300 6298800 6855100 5907400 4669100 8348700 33589 4195 30692 282117;282118;282119;282120;282121;282122;282123;282124;282125;282126;282127 223366;223367;223368;223369;223370;223371;223372 223368 7 LVLLFSGK Unmodified 875.54804 0.54803961 2500 Q15126 PMVK Phosphomevalonate kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.561 78.618 2 0.017183 90690 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 66.073 19.703 135270000 0 0 0 7322000 6411200 17707000 13453000 8645700 6968000 14039000 11399000 13113000 7892400 7540300 20774000 33590 2500 30693 282128;282129;282130;282131;282132;282133;282134;282135;282136;282137;282138;282139 223373;223374;223375;223376 223376 4 LVLLGADEEEPQLR Unmodified 1580.841 0.84098675 4155 Q9BU02 THTPA Thiamine-triphosphatase yes yes 0 0 0 By MS/MS 10 0 1 1 78.359 78.605 2 0.0042927 90419 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.653 64.495 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33591 4155 30694 282140 223377 223377 1 LVLLGESAVGK Unmodified 1084.6492 0.64921022 1646;1104;1829 P51148;P61020;P20339 RAB5C;RAB5B;RAB5A Ras-related protein Rab-5C;Ras-related protein Rab-5B;Ras-related protein Rab-5A no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.89 3.41 3 2 13 2 2 1 1 1 1 1 1 1 1 1 1 1 1 2 70.173 68.91 2 4.7881E-05 78844 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 115.71 81.462 4425300000 614960000 774980000 118760000 113330000 157230000 170570000 215910000 300400000 142770000 322920000 409610000 273560000 191230000 225970000 393100000 33592 1646;1829;1104 30695 282141;282142;282143;282144;282145;282146;282147;282148;282149;282150;282151;282152;282153;282154;282155;282156;282157;282158 223378;223379;223380;223381;223382;223383;223384;223385;223386;223387;223388;223389;223390;223391;223392;223393;223394 223380 16 LVLLTASK Unmodified 843.54295 0.54295423 3781 Q96CP2 FLYWCH2 FLYWCH family member 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.89 2.72 3 1 24 1 2 1 2 2 2 2 2 2 2 2 2 2 2 2 55.112 54.416 1;2 0.0067687 60452 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 97.798 37.01 5135800000 320070000 87418000 38930000 304480000 327170000 299650000 374820000 316130000 323570000 376420000 472070000 596070000 374030000 307810000 617170000 33593 3781 30696 282159;282160;282161;282162;282163;282164;282165;282166;282167;282168;282169;282170;282171;282172;282173;282174;282175;282176;282177;282178;282179;282180;282181;282182;282183;282184;282185;282186 223395;223396;223397;223398;223399;223400;223401;223402;223403;223404;223405;223406;223407;223408;223409;223410;223411;223412 223408 16 LVLNTAVPDRLPAR Unmodified 1533.8991 0.89911075 4058 Q99741 CDC6 Cell division control protein 6 homolog yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 69.995 70.12 3 0.00074049 80658 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 61.11 56.396 53539000 0 0 0 2039800 0 6795500 2837300 5052800 4369400 4004000 6860300 6148400 3633800 4255900 7541800 33594 4058 30697 282187;282188;282189;282190;282191;282192;282193;282194;282195;282196;282197 223413;223414;223415;223416;223417;223418;223419;223420;223421 223413 9 LVLPAPQISDAELQEVVK Unmodified 1948.0881 0.088093311 4010 Q99459 CDC5L Cell division cycle 5-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.3 3.22 4 1 18 1 3 1 2 1 2 2 1 2 2 2 2 2 91.179 90.239 2;3 8.2049E-15 104770 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 101.53 97.192 813690000 7149100 717110000 1926500 0 3484200 1353100 2382900 4692100 2027100 18481000 11555000 9097200 0 5192800 29240000 33595 4010 30698 282198;282199;282200;282201;282202;282203;282204;282205;282206;282207;282208;282209;282210;282211;282212;282213;282214;282215;282216;282217;282218;282219;282220 223422;223423;223424;223425;223426;223427;223428;223429;223430;223431;223432;223433;223434;223435;223436;223437;223438;223439;223440;223441 223429 19 LVLPMIK Oxidation (M) 828.5143 0.51429664 149 O00410 IPO5 Importin-5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 25 2 2 2 2 2 2 3 2 2 2 2 2 70.325 70.401 2 0.034598 81362 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 59.641 42.079 417930000 0 0 0 19215000 20171000 56379000 29842000 22592000 16255000 56033000 41964000 44034000 26476000 33591000 51375000 33596 149 30699 282221;282222;282223;282224;282225;282226;282227;282228;282229;282230;282231;282232;282233;282234;282235;282236;282237;282238;282239;282240;282241;282242;282243;282244;282245 223442;223443;223444;223445;223446;223447;223448;223449;223450;223451;223452;223453 223452 12 LVLPMIK Unmodified 812.51938 0.51938202 149 O00410 IPO5 Importin-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.707 78.765 2 0.044016 90864 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 66.994 40.885 286240000 0 0 0 7804000 10167000 39374000 12413000 17026000 8787400 29551000 21373000 18749000 15535000 25961000 79504000 33597 149 30699 282246;282247;282248;282249;282250;282251;282252;282253;282254;282255;282256;282257 223454;223455;223456;223457;223458;223459;223460;223461 223454 8 LVLPPPDPLDLPLR Unmodified 1553.9181 0.91811486 2540 Q15477 SKIV2L Helicase SKI2W yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 94.533 94.686 2 0.028243 110265 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 32.606 28.719 8484700 0 0 0 0 0 0 0 626960 0 2148600 1491000 0 0 1036000 3182200 33598 2540 30700 282258;282259;282260;282261;282262 223462 223462 1 LVLPSLISSR Unmodified 1083.6652 0.66519463 2256 Q13228 SELENBP1 Selenium-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 82.903 82.953 2 0.0018135 95511 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 101.43 82.648 107050000 0 0 0 1026500 1079400 2357600 1449200 2124400 0 1880100 13825000 12678000 0 12515000 58115000 33599 2256 30701 282263;282264;282265;282266;282267;282268;282269;282270;282271;282272 223463;223464;223465;223466 223463 4 LVLPSQAQAR Unmodified 1081.6244 0.62439245 3915 Q96L91 EP400 E1A-binding protein p400 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 46.702 46.817 2 0.0066962 52758 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 64.265 50.107 147140000 0 0 0 7114700 8151700 11398000 12303000 10663000 7644200 18548000 16095000 22812000 17847000 14560000 0 33600 3915 30702 282273;282274;282275;282276;282277;282278;282279;282280;282281;282282;282283 223467;223468;223469;223470;223471;223472;223473;223474;223475;223476 223467 9 LVLQDHQAFR Unmodified 1225.6568 0.65675521 3006 Q6ZRS2 SRCAP Helicase SRCAP yes yes 0 0 0 By MS/MS 10 0 1 1 44.775 45.024 3 0.048104 49588 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 60.434 42.625 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33601 3006 30703 282284 223477 223477 1 LVLQIDNAK Unmodified 1012.5917 0.59169534 52 CON__O76013;O76013 KRT36 Keratin, type I cuticular Ha6 yes no 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 55.311 55.715 2 0.013227 63498 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 60.118 17.254 + 26557000 0 0 0 0 0 0 0 17840000 0 0 0 0 0 0 8716500 33602 52 30704 282285;282286 223478 223478 1 LVLQMPR Unmodified 855.50004 0.50004356 624 O95163 IKBKAP Elongator complex protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 63.947 64.113 2 0.046463 73179 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 65.897 49.192 65899000 0 0 0 4994700 0 0 0 0 0 8042400 9984600 8430400 7491700 7756400 19198000 33603 624 30705 282287;282288;282289;282290;282291;282292;282293 223479 223479 1 LVLQSVANMK Oxidation (M) 1117.6165 0.61652988 4928 Q9UIU6 SIX4 Homeobox protein SIX4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 2 46.76 46.923 2 0.0080037 53047 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 76.478 58.038 4798900 0 0 0 0 0 0 0 0 0 4798900 0 0 0 0 0 33604 4928 30706 282294;282295;282296;282297;282298 223480;223481;223482;223483;223484 223481 6278 5 LVLQSVANMK Unmodified 1101.6216 0.62161526 4928 Q9UIU6 SIX4 Homeobox protein SIX4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 62.918 63.491 2 0.024932 71910 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.753 18.814 5897500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5897500 33605 4928 30706 282299;282300;282301;282302 223485;223486;223487;223488 223485 4 LVLSGPSGTGK Unmodified 1014.571 0.5709599 3432 Q8NEY1 NAV1 Neuron navigator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 37.139 37.308 2 0.0031312 40912 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 64.654 7.4761 108780000 0 0 0 5098000 8522100 8907600 10168000 10652000 0 14185000 10868000 13330000 0 11748000 15299000 33606 3432 30707 282303;282304;282305;282306;282307;282308;282309;282310;282311;282312 223489;223490;223491;223492;223493;223494;223495;223496;223497;223498;223499 223494 10 LVLSSLPK Unmodified 855.54295 0.54295423 950 P11474 ESRRA Steroid hormone receptor ERR1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 68.257 62.277 2 0.031577 83123 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.929 28.977 45804000 25547000 16069000 4188300 0 0 0 0 0 0 0 0 0 0 0 0 33607 950 30708 282313;282314;282315 223500 223500 1 LVLTNNQLTTLPR Unmodified 1481.8566 0.85657723 5065 Q9UQ13 SHOC2 Leucine-rich repeat protein SHOC-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.13 76.188 2 5.5803E-09 87456 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 129.7 102.59 106260000 0 0 0 3788800 4792100 8981900 8913400 10097000 5134200 14068000 8952200 12012000 7614300 6812800 15095000 33608 5065 30709 282316;282317;282318;282319;282320;282321;282322;282323;282324;282325;282326;282327 223501;223502;223503;223504;223505;223506;223507;223508;223509;223510;223511;223512 223504 12 LVLVGDGGTGK Unmodified 1014.571 0.5709599 1912 P62826 RAN GTP-binding nuclear protein Ran yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.05 3.86 14 6 19 7 9 4 2 2 1 2 1 1 1 2 1 2 2 2 46.635 43.9 1;2 2.404E-09 53423 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 142.92 44.89 22977000000 1747000000 15515000000 730480000 185540000 142180000 168820000 187150000 178620000 129280000 218500000 721050000 818990000 204540000 530490000 1499200000 33609 1912 30710 282328;282329;282330;282331;282332;282333;282334;282335;282336;282337;282338;282339;282340;282341;282342;282343;282344;282345;282346;282347;282348;282349;282350;282351;282352;282353;282354;282355;282356;282357;282358;282359;282360;282361;282362;282363;282364;282365;282366 223513;223514;223515;223516;223517;223518;223519;223520;223521;223522;223523;223524;223525;223526;223527;223528;223529;223530;223531;223532;223533;223534;223535;223536;223537;223538;223539;223540;223541;223542;223543;223544;223545;223546;223547;223548;223549;223550;223551;223552;223553;223554;223555;223556;223557;223558 223535 44 LVLVLNK Unmodified 797.53747 0.53747492 4674 Q9NVN8 GNL3L Guanine nucleotide-binding protein-like 3-like protein yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 60.723 61.07 2 0.024368 69187 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 82.939 41.437 25747000 0 0 0 0 0 0 0 0 0 0 0 12761000 0 12986000 0 33610 4674 30711 282367;282368 223559;223560 223560 2 LVLVNAVYFR Unmodified 1192.6968 0.69682911 1344 P35237 SERPINB6 Serpin B6 yes yes 0 0 0 By MS/MS 10 0 1 1 84.569 84.748 2 0.0072907 97881 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.127 58.977 7050200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7050200 33611 1344 30712 282369 223561 223561 1 LVLVSPTSEQYDSLLR Unmodified 1818.9727 0.9727292 124 O00178 GTPBP1 GTP-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 85.551 85.658 2 2.1622E-20 98975 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 125.28 109.74 82244000 0 0 0 0 3006900 7411100 2790200 6816400 5272400 13773000 8108100 9776500 3457800 6458400 15374000 33612 124 30713 282370;282371;282372;282373;282374;282375;282376;282377;282378;282379;282380 223562;223563;223564;223565;223566;223567;223568;223569;223570;223571;223572;223573 223565 12 LVLWDINK Unmodified 999.57532 0.57531699 3401 Q8NBQ5 HSD17B11 Estradiol 17-beta-dehydrogenase 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.425 79.485 2 0.0053152 91807 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 107.32 58.814 380450000 0 0 0 15100000 20853000 32311000 22253000 40033000 23422000 35511000 30486000 49000000 27041000 31138000 53305000 33613 3401 30714 282381;282382;282383;282384;282385;282386;282387;282388;282389;282390;282391;282392 223574;223575;223576;223577;223578;223579;223580;223581;223582;223583;223584;223585 223574 12 LVLYPSAQEK Unmodified 1146.6285 0.62847478 2892 Q6L8Q7 PDE12 2',5'-phosphodiesterase 12 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching 8.23 3.24 2 1 10 1 2 1 1 1 1 1 1 1 1 1 1 53.758 52.417 2 0.0008198 67535 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.05 96.846 284990000 5303400 206570000 0 2759700 3160800 5173200 0 3650800 0 5897800 9598700 8083400 7367400 8874300 18552000 33614 2892 30715 282393;282394;282395;282396;282397;282398;282399;282400;282401;282402;282403;282404;282405 223586;223587;223588 223586 2 LVMAGETTNSR Oxidation (M) 1193.571 0.57103625 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 14.501 14.664 2 0.00095718 14039 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 72.643 63.429 188260000 0 0 0 13061000 11371000 14977000 11662000 10926000 10528000 17475000 21656000 21863000 12729000 12184000 29831000 33615 1201 30716 282406;282407;282408;282409;282410;282411;282412;282413;282414;282415;282416;282417;282418;282419;282420;282421;282422;282423;282424;282425;282426;282427;282428;282429 223589;223590;223591;223592;223593;223594;223595 223592 1752 2 LVMDQISEAR Oxidation (M) 1176.5809 0.58087266 4325 Q9H0E3 SAP130 Histone deacetylase complex subunit SAP130 yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 32.805 32.869 2 0.023806 36180 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 57.59 36.289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33616 4325 30717 282430;282431 223596;223597 223596 2 LVMDQISEAR Unmodified 1160.586 0.58595803 4325 Q9H0E3 SAP130 Histone deacetylase complex subunit SAP130 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 52.645 52.739 2 0.0043308 58463 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.233 49.805 88763000 0 0 0 4962200 5252600 10979000 5543500 7209400 6279900 10158000 8452100 0 9583100 7755700 12589000 33617 4325 30717 282432;282433;282434;282435;282436;282437;282438;282439;282440;282441;282442 223598;223599;223600;223601;223602;223603;223604;223605 223600 8 LVMDQISEARDSMLK Unmodified 1734.8644 0.86444108 4325 Q9H0E3 SAP130 Histone deacetylase complex subunit SAP130 yes yes 0 0 1 By MS/MS 2 0 1 1 80.589 72.459 3 0.00081856 95065 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.326 50.257 16818000 16818000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33618 4325 30718 282443 223606 223606 1 LVMEDGK Unmodified 790.38949 0.38949006 1528 P47897 QARS Glutamine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 4 1 2 1 19.1 17.05 2 0.027725 21931 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.071 58.049 616890000 20395000 596360000 133850 0 0 0 0 0 0 0 0 0 0 0 0 33619 1528 30719 282444;282445;282446;282447 223607;223608 223607 2 LVMEDGK Oxidation (M) 806.3844 0.38440468 1528 P47897 QARS Glutamine--tRNA ligase yes yes 0 1 0 By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 7.1961 7.3334 2 0.022214 5595 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 71.715 28.996 67253000 0 0 0 3845700 0 7633900 0 3732000 5075300 7315200 15697000 8533700 7085500 8334200 0 33620 1528 30719 282448;282449;282450;282451;282452;282453;282454;282455;282456 223609;223610;223611 223610 3 LVMEEAPESYK Unmodified 1294.6115 0.61150408 5168 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 50.271 48.968 2 3.0919E-06 54735 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 143.03 106.48 1339000000 22752000 641200000 5813900 33483000 38122000 53170000 39513000 41131000 52333000 61346000 71941000 84229000 43555000 54612000 95788000 33621 5168 30720 282457;282458;282459;282460;282461;282462;282463;282464;282465;282466;282467;282468;282469;282470;282471;282472 223612;223613;223614;223615;223616;223617;223618;223619;223620;223621;223622;223623;223624;223625;223626;223627;223628;223629;223630;223631 223625 17 LVMEEAPESYK Oxidation (M) 1310.6064 0.60641871 5168 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.56 3 2 1 13 2 1 1 1 2 1 1 1 1 1 1 1 1 1 35.619 34.896 2 5.9552E-13 38423 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 157.99 135.91 784470000 0 385240000 7082000 35384000 21120000 31988000 30235000 29155000 31831000 40829000 33074000 44770000 32117000 23362000 38284000 33622 5168 30720 282473;282474;282475;282476;282477;282478;282479;282480;282481;282482;282483;282484;282485;282486;282487;282488 223632;223633;223634;223635;223636;223637;223638;223639;223640;223641;223642;223643;223644;223645;223646;223647;223648;223649 223648 6544 17 LVMEYLAICDECYITEMEMLLNEK Oxidation (M) 3025.3503 0.35027564 1440 P41250 GARS Glycine--tRNA ligase yes yes 0 1 0 By MS/MS 2 0 1 1 102.82 94.688 3 0.00014272 121757 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.426 44.824 9931500 9931500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33623 1440 30721 282489 223650;223651 223650 2266 2 LVMEYLAICDECYITEMEMLLNEK Unmodified 3009.3554 0.35536102 1440 P41250 GARS Glycine--tRNA ligase yes yes 0 0 0 By MS/MS 2 0 1 1 103.11 94.98 3 7.4068E-31 122126 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.47 104.74 16018000 16018000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33624 1440 30721 282490 223652 223652 1 LVNANGEAVYCK Unmodified 1336.6445 0.64453555 768 P04040 CAT Catalase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 35.876 35.429 2 3.1925E-06 39980 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 111.61 101.24 89320000 0 42261000 0 11385000 2884400 3132800 0 4198000 3350200 0 3933300 9374400 8800600 0 0 33625 768 30722 282491;282492;282493;282494;282495;282496;282497;282498;282499 223653;223654;223655;223656;223657;223658;223659 223658 7 LVNEAPVYSVYSK Unmodified 1467.7609 0.76094551 554 O75886 STAM2 Signal transducing adapter molecule 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.295 62.392 2 0.037488 70963 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 40.589 29.099 51765000 0 0 0 2982400 1976500 3994300 3728300 3020400 2561500 3897700 5172600 6559400 3379400 4077200 10415000 33626 554 30723 282500;282501;282502;282503;282504;282505;282506;282507;282508;282509;282510;282511 223660 223660 1 LVNELTEFAK Unmodified 1162.6234 0.6233894 65 CON__P02769 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 72.705 71.988 2 0.00020032 82918 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 141.48 122.39 + 4338800000 611400 616480000 0 410920000 502730000 223530000 253120000 197270000 200990000 502270000 413370000 306740000 197750000 227920000 285090000 33627 65 30724 282512;282513;282514;282515;282516;282517;282518;282519;282520;282521;282522;282523;282524;282525;282526;282527 223661;223662;223663;223664;223665;223666;223667;223668;223669;223670;223671;223672;223673;223674;223675;223676;223677;223678;223679;223680;223681;223682;223683;223684;223685;223686;223687;223688;223689 223677 29 LVNELTEK Unmodified 944.51786 0.51786169 3151 Q86UP2 KTN1 Kinectin yes yes 0 0 0 By MS/MS 10 0 1 1 27.065 27.756 2 0.044749 29154 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.787 2.8148 47823000 0 0 0 0 0 0 0 0 0 0 0 47823000 0 0 0 33628 3151 30725 282528 223690 223690 1 LVNETFQK Unmodified 977.5182 0.51819605 2891 Q6KC79 NIPBL Nipped-B-like protein yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 34.206 29.628 2 0.01467 38544 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.352 72.31 49220000 0 49220000 0 0 0 0 0 0 0 0 0 0 0 0 0 33629 2891 30726 282529;282530 223691 223691 1 LVNEVTEFAK Unmodified 1148.6077 0.60773933 64 CON__P02768-1;P02768 ALB Serum albumin yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 13 2 1 1 1 1 1 1 1 1 1 1 1 59.213 59.263 2 0.0015995 67275 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 120.99 84.542 + 2716900000 0 0 0 848030000 48791000 38975000 34946000 1292400000 39069000 66235000 99102000 75070000 107440000 27295000 39577000 33630 64 30727 282531;282532;282533;282534;282535;282536;282537;282538;282539;282540;282541;282542;282543 223692;223693;223694;223695;223696;223697;223698;223699;223700;223701;223702;223703;223704;223705;223706 223699 14 LVNHFVEEFK Unmodified 1260.6503 0.65027285 908 P0DMV9;P0DMV8 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.68 1.57 1 24 1 2 2 2 2 2 2 2 2 2 2 2 2 61.328 61.099 2;3 7.5276E-10 69624 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 142.98 80.518 1304300000 15649000 0 0 30136000 19671000 89170000 31140000 48769000 47732000 73269000 105930000 165220000 69797000 104670000 503110000 33631 908 30728 282544;282545;282546;282547;282548;282549;282550;282551;282552;282553;282554;282555;282556;282557;282558;282559;282560;282561;282562;282563;282564;282565;282566;282567;282568 223707;223708;223709;223710;223711;223712;223713;223714;223715;223716;223717;223718;223719;223720;223721;223722;223723;223724;223725;223726;223727;223728;223729;223730 223709 15 LVNIRNDDIADGNPK Unmodified 1652.8482 0.84819739 2501 Q15149 PLEC Plectin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.08 3.33 2 1 9 1 1 1 1 1 1 1 1 1 1 1 1 46.33 45.104 3 8.6718E-19 56857 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 119.87 101.73 117820000 10428000 3023300 23473000 0 8470900 7306700 7485800 0 4471100 8088800 9826100 14433000 0 9393800 11416000 33632 2501 30729 282569;282570;282571;282572;282573;282574;282575;282576;282577;282578;282579;282580 223731;223732;223733;223734;223735;223736;223737;223738;223739;223740;223741 223738 9 LVNIRNDDITDGNPK Unmodified 1682.8588 0.85876208 5049;2086 Q9UPN3;Q03001 MACF1;DST Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5;Dystonin no no 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 51.468 45.567 3 0.00041056 59864 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.692 60 47807000 5518200 23221000 19068000 0 0 0 0 0 0 0 0 0 0 0 0 33633 5049;2086 30730 282581;282582;282583 223742;223743;223744;223745 223743 4 LVNLFQQGGR Unmodified 1130.6196 0.61964142 1112 P20749 BCL3 B-cell lymphoma 3 protein yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 66.232 66.496 2 0.0038168 75909 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 75.109 52.328 18949000 0 0 0 0 0 0 0 0 4005900 0 0 7613600 0 7329100 0 33634 1112 30731 282584;282585;282586 223746;223747 223747 2 LVNLNVK Unmodified 798.49634 0.49633839 4960 Q9UKA9 PTBP2 Polypyrimidine tract-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44.426 43.404 2 0.023327 48725 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 91.14 40.834 710000000 150210000 300520000 5598700 10386000 9321400 22957000 15655000 20201000 12534000 27474000 22867000 22133000 20031000 22638000 47473000 33635 4960 30732 282587;282588;282589;282590;282591;282592;282593;282594;282595;282596;282597;282598;282599;282600;282601 223748;223749;223750;223751;223752;223753;223754 223751 5 LVNLQHLDLLNNK Unmodified 1532.8675 0.86747627 3738 Q96AG4 LRRC59 Leucine-rich repeat-containing protein 59 yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 78.978 79.025 3 1.2788E-09 90938 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 115.57 95.193 39756000 0 0 0 1134300 945260 3358100 1228800 3983400 4071000 3814200 1789200 0 4416800 3415300 11599000 33636 3738 30733 282602;282603;282604;282605;282606;282607;282608;282609;282610;282611;282612 223755;223756 223755 2 LVNQWIK Unmodified 899.52289 0.52288749 1474 P43246 MSH2 DNA mismatch repair protein Msh2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 54.065 54.349 2 0.0165 61237 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 115.83 66.614 249960000 0 0 0 0 0 25379000 27256000 22638000 21011000 27354000 28564000 29750000 0 23792000 44210000 33637 1474 30734 282613;282614;282615;282616;282617;282618;282619;282620;282621 223757;223758;223759;223760;223761 223759 5 LVNTINPGAR Unmodified 1053.5931 0.59309232 3683 Q92900 UPF1 Regulator of nonsense transcripts 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 35.52 35.704 2 2.3311E-10 38063 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 170.22 133.19 256670000 0 0 0 12280000 10493000 21945000 16323000 18862000 14724000 0 22586000 27575000 25679000 26467000 59734000 33638 3683 30735 282622;282623;282624;282625;282626;282627;282628;282629;282630;282631;282632 223762;223763;223764;223765;223766;223767;223768;223769;223770;223771 223763 6 LVNTLNTIPSLGQSPGPVVVSNNSSAHGSQR Unmodified 3129.6167 0.6166879 3084 Q7Z3K3 POGZ Pogo transposable element with ZNF domain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 79.674 79.771 3 2.2424E-61 91942 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.66 98.166 68917000 0 0 0 0 3755100 6856800 0 6250200 4803100 8751500 4755100 9320400 3776200 5044100 15605000 33639 3084 30736 282633;282634;282635;282636;282637;282638;282639;282640;282641;282642 223772;223773;223774;223775;223776;223777;223778;223779;223780 223774 9 LVNTQDMSASQVDVAVK Unmodified 1803.9037 0.90366336 1739 P54278 PMS2 Mismatch repair endonuclease PMS2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 63.865 63.496 2 1.5705E-54 79243 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 185.59 161.84 189290000 0 73878000 0 2887300 5242300 7793500 7768100 6745300 5378300 14197000 12679000 13018000 10798000 9921100 18980000 33640 1739 30737 282643;282644;282645;282646;282647;282648;282649;282650;282651;282652;282653;282654;282655 223781;223782;223783;223784;223785;223786;223787;223788;223789;223790;223791;223792 223784 12 LVNTQDMSASQVDVAVK Oxidation (M) 1819.8986 0.89857798 1739 P54278 PMS2 Mismatch repair endonuclease PMS2 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 49.02 49.147 2 1.7493E-41 54947 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 148.68 127.73 86759000 0 0 0 5512600 5795800 9621500 8091400 0 0 9531900 0 21663000 8988000 10056000 7499200 33641 1739 30737 282656;282657;282658;282659;282660;282661;282662;282663;282664 223793;223794;223795;223796;223797;223798;223799 223797 2815 7 LVNTTITPEPEPKPQPNSR Unmodified 2117.1117 0.1116823 3161 Q86V48 LUZP1 Leucine zipper protein 1 yes yes 0 0 1 By matching By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 47.319 47.497 3 0.0050562 53029 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 32.565 28.296 22055000 0 0 0 0 2760100 0 3513800 0 0 4163500 4740500 6877300 0 0 0 33642 3161 30738 282665;282666;282667;282668;282669 223800 223800 1 LVPDPPNDLRK Unmodified 1262.6983 0.69828568 633 O95243 MBD4 Methyl-CpG-binding domain protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 6 1 1 1 1 1 1 41.966 42.049 3 0.029551 46607 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 30.139 17.706 28114000 0 0 0 5446600 5107400 0 0 0 0 5533100 0 0 4568900 4979800 2478300 33643 633 30739 282670;282671;282672;282673;282674;282675 223801 223801 1 LVPEAVGDQK Unmodified 1054.5659 0.56587452 1579 P49589 CARS Cysteine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32.568 31.752 2 0.0017459 35330 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 88.921 66.534 787990000 20393000 583900000 2623400 8287100 8562900 13596000 16959000 9320100 9926300 17730000 18944000 21311000 12048000 15702000 28689000 33644 1579 30740 282676;282677;282678;282679;282680;282681;282682;282683;282684;282685;282686;282687;282688;282689;282690 223802;223803;223804;223805;223806;223807;223808;223809;223810;223811;223812 223802 10 LVPESLK Unmodified 784.46945 0.46945494 3301 Q8N0X7 SPG20 Spartin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36.607 36.147 2 0.024035 39787 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 83.614 34.854 1177100000 0 276050000 8414200 42526000 52922000 76833000 58050000 96617000 59133000 81402000 79733000 96718000 89724000 79537000 79481000 33645 3301 30741 282691;282692;282693;282694;282695;282696;282697;282698;282699;282700;282701;282702;282703;282704 223813;223814;223815 223815 3 LVPFATAVAELDLK Unmodified 1485.8443 0.84428121 2511 Q15283 RASA2 Ras GTPase-activating protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 98.347 90.217 2 0.013534 116444 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.385 58.804 14630000 14630000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33646 2511 30742 282705 223816;223817 223817 2 LVPFDHAESTYGLYR Unmodified 1766.8628 0.86278482 641 O95336 PGLS 6-phosphogluconolactonase yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 74.421 74.663 3 0.0005075 85609 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.641 50.362 28934000 0 0 0 0 0 0 0 0 0 0 0 0 0 7332300 21602000 33647 641 30743 282706;282707 223818;223819 223819 2 LVPGGGATEIELAK Unmodified 1353.7504 0.75038083 1641 P50990 CCT8 T-complex protein 1 subunit theta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.525 64.614 2 0.00038112 73308 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.632 53.328 293700000 0 0 0 13462000 12557000 25454000 18728000 8920800 12303000 26760000 32960000 53606000 22745000 20601000 45606000 33648 1641 30744 282708;282709;282710;282711;282712;282713;282714;282715;282716;282717;282718;282719 223820;223821;223822;223823;223824;223825;223826;223827;223828;223829;223830;223831 223823 11 LVPGLQDSEEK Unmodified 1213.619 0.6190323 4130 Q9BSM1 PCGF1 Polycomb group RING finger protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.43 2.06 1 13 1 1 1 1 1 1 1 1 1 1 2 1 1 43.798 43.575 2 0.001453 48831 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 72.643 57.492 259630000 0 111980000 0 10980000 5910000 11661000 7252500 13988000 7037400 14605000 12356000 23566000 15817000 8129800 16338000 33649 4130 30745 282720;282721;282722;282723;282724;282725;282726;282727;282728;282729;282730;282731;282732;282733 223832;223833;223834;223835;223836;223837;223838;223839;223840;223841 223832 10 LVPGPVFGSK Unmodified 999.57532 0.57531699 2208 Q12907 LMAN2 Vesicular integral-membrane protein VIP36 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.968 60.075 2 0.011327 67667 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 54.436 31.127 302400000 0 0 0 16160000 15543000 19543000 25779000 25025000 14708000 26412000 33548000 34125000 29090000 24603000 37871000 33650 2208 30746 282734;282735;282736;282737;282738;282739;282740;282741;282742;282743;282744;282745 223842;223843;223844;223845;223846 223846 5 LVPHNESAWNYLK Unmodified 1569.794 0.79397698 1567 P49354 FNTA Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha yes yes 0 0 0 By MS/MS 2 0 1 1 75.234 67.104 3 0.0012896 88424 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.602 55.638 96836000 96836000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33651 1567 30747 282746 223847 223847 1 LVPLDYGEDDK Unmodified 1262.603 0.60304789 1596 P49756 RBM25 RNA-binding protein 25 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 58.626 57.457 2 2.4833E-05 66056 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 146.69 134.74 2525000000 19223000 379440000 0 106920000 117210000 128720000 153380000 126460000 184190000 181490000 262500000 202450000 215680000 181000000 266330000 33652 1596 30748 282747;282748;282749;282750;282751;282752;282753;282754;282755;282756;282757;282758;282759;282760;282761 223848;223849;223850;223851;223852;223853;223854;223855;223856;223857;223858;223859;223860;223861;223862;223863;223864;223865 223851 18 LVPLLDTGDIIIDGGNSEYR Unmodified 2159.111 0.1110136 1680 P52209 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes yes 0 0 0 By MS/MS 10 0 1 1 93.121 93.259 2 0.047621 108096 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.204 26.002 973030 0 0 0 0 0 0 0 0 0 0 0 0 0 0 973030 33653 1680 30749 282762 223866 223866 1 LVPLLLEDGGEAPAALEAALEEK Unmodified 2347.2523 0.25225811 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.27 0.445 8 3 4 5 2 99.415 94.541 2;3 1.965E-122 118053 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 179.81 170.99 1286800000 429320000 833590000 23870000 0 0 0 0 0 0 0 0 0 0 0 0 33654 2392 30750 282763;282764;282765;282766;282767;282768;282769;282770;282771;282772;282773 223867;223868;223869;223870;223871;223872;223873;223874;223875;223876;223877;223878;223879;223880;223881 223870 15 LVPLNQESVEER Unmodified 1411.7307 0.73070802 3311 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.3 51.449 2 2.1647E-05 58101 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 121.6 102.93 634230000 0 0 0 32055000 33753000 54820000 40643000 68041000 27229000 64170000 59655000 65899000 63171000 54562000 70231000 33655 3311 30751 282774;282775;282776;282777;282778;282779;282780;282781;282782;282783;282784;282785 223882;223883;223884;223885;223886;223887;223888;223889;223890;223891;223892;223893;223894;223895 223884 14 LVPLQEEIYRK Unmodified 1386.7871 0.78710068 2653 Q2NKX8 ERCC6L DNA excision repair protein ERCC-6-like yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 61.535 61.707 3 0.0015899 69622 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.255 54.961 47034000 0 0 0 0 1759900 5021300 3075000 3995300 2309900 3840700 5843700 5890500 3059500 4561000 7676600 33656 2653 30752 282786;282787;282788;282789;282790;282791;282792;282793;282794;282795;282796 223896;223897;223898;223899;223900;223901;223902;223903;223904 223899 9 LVPMAAHEASSLYSEEK Oxidation (M) 1876.8877 0.88767894 4386 Q9H3S7 PTPN23 Tyrosine-protein phosphatase non-receptor type 23 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 6.8 3.92 2 3 1 1 1 1 1 54.739 52.777 3 0.00045635 59490 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 49.463 40.913 22003000 6940000 0 0 0 0 4245200 0 0 3931400 6886500 0 0 0 0 0 33657 4386 30753 282797;282798;282799;282800;282801 223905;223906;223907;223908 223907 5842 4 LVPMAAHEASSLYSEEK Unmodified 1860.8928 0.89276432 4386 Q9H3S7 PTPN23 Tyrosine-protein phosphatase non-receptor type 23 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 68.381 62.371 3 3.3647E-05 83241 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.133 70.432 19231000 8903100 0 10328000 0 0 0 0 0 0 0 0 0 0 0 0 33658 4386 30753 282802;282803 223909;223910 223909 2 LVPNYNFK Unmodified 993.52837 0.5283668 3009 Q6ZS30 NBEAL1 Neurobeachin-like protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 61.394 53.138 2 0.035984 72001 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.355 54.793 11472000 11472000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33659 3009 30754 282804 223911 223911 1 LVPPECHCVREGK Unmodified 1579.7599 0.75991643 2027 P98194 ATP2C1 Calcium-transporting ATPase type 2C member 1 yes yes 0 0 1 By MS/MS 2 0 1 1 30.035 24.415 3 0.019508 34430 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 30.107 14.521 7917800 7917800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33660 2027 30755 282805 223912 223912 1 LVPQLVR Unmodified 823.52797 0.52797287 362 O43747 AP1G1 AP-1 complex subunit gamma-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.513 52.656 2 0.049018 59618 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 64.563 33.894 92700000 0 0 0 4416000 3477700 11234000 4272400 5564300 4244200 11465000 6563100 10726000 6574000 7021000 17142000 33661 362 30756 282806;282807;282808;282809;282810;282811;282812;282813;282814;282815;282816;282817 223913 223913 1 LVPQQLAH Unmodified 904.51305 0.51305109 924 P10606 COX5B Cytochrome c oxidase subunit 5B, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 43.043 37.895 2 0.012426 49162 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.511 68.207 80584000 0 80584000 0 0 0 0 0 0 0 0 0 0 0 0 0 33662 924 30757 282818 223914 223914 1 LVPSQAEIEAR Unmodified 1211.651 0.65100113 3901 Q96K21 ZFYVE19 Abscission/NoCut checkpoint regulator yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 46.386 46.552 2 0.0028382 51351 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 80.755 65.495 77863000 0 0 0 4658700 4034500 4711900 3208000 0 3585000 7061700 12751000 12734000 5939900 7486600 11691000 33663 3901 30758 282819;282820;282821;282822;282823;282824;282825;282826;282827;282828;282829 223915;223916;223917;223918;223919 223918 5 LVPSQEETK Unmodified 1029.5342 0.53424004 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.86 2.8 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 15.972 15.829 2 0.0032698 16140 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 93.162 71.392 551580000 0 280680000 0 10127000 7745000 12837000 15337000 11902000 9203200 20904000 0 40829000 27994000 42930000 71097000 33664 1564 30759 282830;282831;282832;282833;282834;282835;282836;282837;282838;282839;282840;282841;282842;282843 223920;223921;223922;223923;223924;223925;223926;223927;223928;223929;223930;223931;223932;223933 223933 14 LVPSVNGVR Unmodified 939.55016 0.55016488 953 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.714 42.889 2 0.012835 48253 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 60.709 31.333 205940000 0 0 0 20706000 9922500 12605000 14357000 17911000 11500000 14142000 22968000 22495000 14076000 15853000 29402000 33665 953 30760 282844;282845;282846;282847;282848;282849;282850;282851;282852;282853;282854;282855 223934;223935;223936;223937;223938;223939;223940;223941;223942;223943 223934 10 LVPTGLDFGQEGFTR Unmodified 1635.8257 0.82567103 1497 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 82.648 82.79 2 0.0027191 95480 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 46.592 35.379 7588000 0 0 0 0 0 1744100 1711800 2576500 1555600 0 0 0 0 0 0 33666 1497 30761 282856;282857;282858;282859;282860 223944;223945;223946 223945 3 LVPVERNAEPDEQDFEK Unmodified 2013.9643 0.96434936 2397 Q14241 TCEB3 Transcription elongation factor B polypeptide 3 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 56.405 51.551 3 0.033637 64228 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 29.618 21.018 27965000 0 24038000 3927100 0 0 0 0 0 0 0 0 0 0 0 0 33667 2397 30762 282861;282862 223947 223947 1 LVPVGYGIK Unmodified 944.5695 0.56950333 1174 P24534 EEF1B2 Elongation factor 1-beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS 6.9 3.81 6 2 12 3 3 2 1 1 1 1 1 1 1 1 1 1 1 1 60.996 58.773 1;2 0.027295 72074 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 68.915 25.915 9230600000 3060000000 4398000000 344810000 49220000 50397000 110940000 60277000 54911000 49932000 92247000 190940000 189890000 87187000 126290000 365600000 33668 1174 30763 282863;282864;282865;282866;282867;282868;282869;282870;282871;282872;282873;282874;282875;282876;282877;282878;282879;282880;282881;282882 223948;223949;223950;223951;223952;223953;223954 223952 7 LVPVGYGIR Unmodified 972.57565 0.57565135 1255 P29692 EEF1D Elongation factor 1-delta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.275 60.381 2 0.0080753 68834 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 70.67 43.805 491070000 0 0 0 19491000 18650000 39829000 26254000 23746000 19685000 41172000 52325000 67069000 26868000 45423000 110550000 33669 1255 30764 282883;282884;282885;282886;282887;282888;282889;282890;282891;282892;282893;282894 223955;223956;223957;223958;223959;223960;223961;223962;223963;223964;223965 223955 6 LVPVGYGIRK Unmodified 1100.6706 0.67061436 1255 P29692 EEF1D Elongation factor 1-delta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.954 46.123 2 0.023963 51823 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 95.352 40.741 421370000 0 0 0 13153000 10566000 31786000 16619000 22470000 17630000 32409000 44771000 54185000 36848000 30716000 110210000 33670 1255 30765 282895;282896;282897;282898;282899;282900;282901;282902;282903;282904;282905;282906 223966 223966 0 LVPVLSAK Unmodified 825.53239 0.53238955 1392 P37837 TALDO1 Transaldolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 6 2 2 2 59.449 53.466 1;2 0.030163 69103 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.134 9.0996 4340400000 1451600000 2729500000 159300000 0 0 0 0 0 0 0 0 0 0 0 0 33671 1392 30766 282907;282908;282909;282910;282911;282912 223967;223968;223969 223968 3 LVQAAQMLQSDPYSVPAR Oxidation (M) 1988.999 0.99896073 1073 P18206 VCL Vinculin yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 65.353 65.59 2 9.8873E-30 75175 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 113.24 100.88 22985000 0 0 0 0 0 5020400 2548100 0 0 0 4518100 0 0 4788400 6110200 33672 1073 30767 282913;282914;282915;282916;282917;282918 223970;223971;223972;223973 223972 1534 4 LVQAAQMLQSDPYSVPAR Unmodified 1973.004 0.0040461055 1073 P18206 VCL Vinculin yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 77.668 77.86 2 3.4684E-112 89494 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 194.7 170.41 18860000 0 0 0 0 0 0 0 0 0 0 0 0 0 3994300 14866000 33673 1073 30767 282919;282920 223974;223975 223974 2 LVQAAQMLQSDPYSVPARDYLIDGSR Oxidation (M) 2908.4389 0.43890645 1073 P18206 VCL Vinculin yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 79.714 79.852 3 6.5884E-97 92007 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 147.41 134 61886000 0 0 0 0 0 3514500 0 0 0 8301200 7436200 6942400 0 0 35692000 33674 1073 30768 282921;282922;282923;282924;282925 223976;223977;223978;223979;223980;223981;223982;223983 223979 1534 8 LVQAEYWHDPIK Unmodified 1497.7616 0.76161421 1639 P50897 PPT1 Palmitoyl-protein thioesterase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.622 65.708 3 0.024528 75163 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 35.204 19.816 57417000 0 0 0 2587300 2694200 4922200 2614200 5087900 3312700 5184800 7252700 5883200 4072000 4129000 9677000 33675 1639 30769 282926;282927;282928;282929;282930;282931;282932;282933;282934;282935;282936;282937 223984;223985;223986 223986 3 LVQAFQFTDK Unmodified 1195.6237 0.62372375 2131 Q06830 PRDX1 Peroxiredoxin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 4 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 69.553 68.728 2 0.00021904 79871 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 138.98 92.549 4622300000 6918000 17212000 0 0 124140000 191880000 0 219930000 138320000 310870000 835520000 729690000 155020000 456910000 1435800000 33676 2131 30770 282938;282939;282940;282941;282942;282943;282944;282945;282946;282947;282948;282949;282950;282951;282952;282953 223987;223988;223989;223990;223991;223992;223993;223994;223995;223996;223997;223998;223999;224000;224001 224000 14 LVQAFQYTDEHGEVCPAGWK Unmodified 2334.0739 0.073916585 1317 P32119 PRDX2 Peroxiredoxin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 74.551 74.79 3 1.7076E-61 85682 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 133.93 129.9 112380000 0 0 0 0 0 0 0 0 0 0 10469000 11063000 0 6855300 83987000 33677 1317 30771 282954;282955;282956;282957 224002;224003;224004;224005 224002 3 LVQAFQYTDEHGEVCPAGWKPGSDTIK Unmodified 3032.4338 0.43382107 1317 P32119 PRDX2 Peroxiredoxin-2 yes yes 0 0 1 By MS/MS 10 0 1 1 75.003 75.314 3 1.2432E-05 86441 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.882 26.306 8074600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8074600 33678 1317 30772 282958 224006 224006 1 LVQAFQYTDEHGEVCPAGWKPGSDTIKPNVDDSK Unmodified 3787.7788 0.77880378 1317 P32119 PRDX2 Peroxiredoxin-2 yes yes 0 0 2 By MS/MS 10 0 1 1 74.318 74.657 5 1.0516E-08 85552 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 31.58 27.092 25226000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25226000 33679 1317 30773 282959 224007 224007 1 LVQAFQYTDK Unmodified 1211.6186 0.61863837 2245 Q13162 PRDX4 Peroxiredoxin-4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.599 52.742 2 0.00020032 59551 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 141.48 114.23 1098300000 0 0 0 38915000 35644000 38425000 38187000 42592000 35693000 66770000 179620000 228400000 79051000 99126000 215880000 33680 2245 30774 282960;282961;282962;282963;282964;282965;282966;282967;282968;282969;282970;282971 224008;224009;224010;224011;224012;224013;224014;224015;224016;224017;224018;224019 224009 12 LVQAIFPTPDPAALK Unmodified 1579.8974 0.89737941 3662;2171 Q09472;Q92793 EP300;CREBBP Histone acetyltransferase p300;CREB-binding protein no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.66 2.95 4 1 24 1 3 1 2 2 2 2 2 2 2 2 2 2 2 2 86.367 86.035 2;3 3.6808E-41 107243 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 147.28 123.96 655870000 0 190200000 3413200 17310000 31450000 33167000 30472000 38018000 33333000 53295000 44408000 51063000 33001000 35936000 60811000 33681 2171;3662 30775 282972;282973;282974;282975;282976;282977;282978;282979;282980;282981;282982;282983;282984;282985;282986;282987;282988;282989;282990;282991;282992;282993;282994;282995;282996;282997;282998;282999;283000 224020;224021;224022;224023;224024;224025;224026;224027;224028;224029;224030;224031;224032;224033;224034;224035;224036;224037;224038;224039;224040;224041;224042;224043;224044;224045;224046;224047;224048;224049 224026 29 LVQAPLDADGDNVLQEK Unmodified 1823.9265 0.92650729 2072 Q02241 KIF23 Kinesin-like protein KIF23 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 72.649 72.102 2 4.8299E-35 89071 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 166.62 106.71 430400000 0 145840000 0 20694000 20408000 27791000 23162000 26223000 17787000 26270000 26734000 31981000 18365000 16997000 28147000 33682 2072 30776 283001;283002;283003;283004;283005;283006;283007;283008;283009;283010;283011;283012;283013;283014 224050;224051;224052;224053;224054;224055;224056;224057;224058;224059;224060;224061;224062;224063 224054 14 LVQDAYLSR Unmodified 1063.5662 0.56620887 4931 Q9UIW2 PLXNA1 Plexin-A1 yes yes 0 0 0 By MS/MS 10 0 1 1 21.801 21.945 2 0.005209 22577 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 80.229 2.1163 17960000 0 0 0 0 0 0 0 0 17960000 0 0 0 0 0 0 33683 4931 30777 283015 224064 224064 1 LVQDVANNTNEEAGDGTTTATVLAR Unmodified 2559.2413 0.2412525 930 P10809 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.03 3.42 1 5 2 24 2 5 1 2 2 2 2 3 2 2 1 2 2 2 2 64.989 63.955 2;3 0 71763 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 254.59 246.41 6624300000 98627000 1763900000 5521800 282960000 313220000 477140000 471790000 362840000 309360000 467970000 78342000 505620000 464580000 365860000 656620000 33684 930 30778 283016;283017;283018;283019;283020;283021;283022;283023;283024;283025;283026;283027;283028;283029;283030;283031;283032;283033;283034;283035;283036;283037;283038;283039;283040;283041;283042;283043;283044;283045;283046;283047 224065;224066;224067;224068;224069;224070;224071;224072;224073;224074;224075;224076;224077;224078;224079;224080;224081;224082;224083;224084;224085;224086;224087;224088;224089;224090;224091;224092;224093;224094;224095;224096;224097;224098;224099 224092 33 LVQDVANNTNEEAGDGTTTATVLARSIAK Unmodified 2958.4894 0.4894217 930 P10809 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 80.107 75.398 3 5.0637E-163 94643 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 174.86 165.89 124580000 13620000 78358000 32598000 0 0 0 0 0 0 0 0 0 0 0 0 33685 930 30779 283048;283049;283050;283051 224100;224101;224102;224103;224104 224100 5 LVQFEQEIER Unmodified 1289.6616 0.66156582 4016 Q99501 GAS2L1 GAS2-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 63.412 63.569 2 0.011299 72608 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 66.568 16.46 13418000 0 0 0 0 0 0 7443100 5975000 0 0 0 0 0 0 0 33686 4016 30780 283052;283053 224105;224106 224105 2 LVQGGVFQEEAVTEALRAPGK Unmodified 2198.1695 0.16953153 221 O14841 OPLAH 5-oxoprolinase yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 85.121 79.835 3 4.9954E-30 102248 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 117.55 98.474 21524000 17486000 0 4037900 0 0 0 0 0 0 0 0 0 0 0 0 33687 221 30781 283054;283055 224107;224108;224109 224108 3 LVQIASR Unmodified 785.47594 0.4759373 2645 Q1KMD3 HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.043 28.238 2 0.023435 30023 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 85.265 28.755 765040000 0 0 0 30716000 42647000 48797000 37326000 30371000 34042000 70000000 86060000 143380000 80461000 63255000 97976000 33688 2645 30782 283056;283057;283058;283059;283060;283061;283062;283063;283064;283065;283066;283067 224110;224111;224112;224113;224114;224115;224116 224114 5 LVQIEYALAAVAGGAPSVGIK Unmodified 2026.1463 0.14627689 1194 P25787 PSMA2 Proteasome subunit alpha type-2 yes yes 0 0 0 By MS/MS By MS/MS 2.67 0.471 1 2 2 1 98.328 93.344 3 4.6244E-18 117159 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.324 75.725 24807000 22933000 1874200 0 0 0 0 0 0 0 0 0 0 0 0 0 33689 1194 30783 283068;283069;283070 224117;224118 224118 2 LVQILHR Unmodified 877.54977 0.54977095 1685 P52306 RAP1GDS1 Rap1 GTPase-GDP dissociation stimulator 1 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 39.322 39.634 2 0.048866 44380 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 64.776 20.166 10336000 0 0 0 0 0 3333000 0 1329000 0 0 0 0 0 0 5674300 33690 1685 30784 283071;283072;283073 224119 224119 1 LVQLGQAEK Unmodified 984.5604 0.56039521 475 O75208 COQ9 Ubiquinone biosynthesis protein COQ9, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 33.792 33.267 2 0.0030483 35670 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 91.318 49.87 419780000 0 35798000 0 21309000 25625000 24190000 24058000 31850000 20956000 35672000 42342000 58811000 45341000 19775000 34055000 33691 475 30785 283074;283075;283076;283077;283078;283079;283080;283081;283082;283083;283084;283085;283086;283087 224120;224121;224122;224123;224124;224125;224126;224127;224128;224129;224130;224131;224132;224133 224131 13 LVQLLGGVAEK Unmodified 1125.6758 0.67575932 156 O00443 PIK3C2A Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 71.412 70.797 2 0.00046543 90079 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.06 76.325 36135000 0 15103000 0 0 2581100 0 2880200 3933800 2853400 0 0 5263100 3521100 0 0 33692 156 30786 283088;283089;283090;283091;283092;283093;283094;283095;283096 224134;224135;224136;224137;224138;224139;224140;224141;224142 224135 9 LVQLLVK Unmodified 811.55312 0.55312499 1010 P14923 JUP Junction plakoglobin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.33 63.424 2 0.02139 72399 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 106.76 54.53 1012200000 0 0 0 203210000 60113000 53108000 49628000 245290000 34301000 73743000 60563000 74804000 85727000 35063000 36606000 33693 1010 30787 283097;283098;283099;283100;283101;283102;283103;283104;283105;283106;283107;283108 224143;224144;224145;224146;224147;224148;224149;224150;224151;224152;224153;224154;224155 224149 13 LVQLQEK Unmodified 856.50182 0.5018177 2768 Q5T1M5 FKBP15 FK506-binding protein 15 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 27.945 27.479 2 0.023276 34519 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.2 48.098 477570000 0 324810000 0 8705000 8184200 13743000 12076000 8684300 6957400 15565000 15098000 17978000 13591000 13858000 18324000 33694 2768 30788 283109;283110;283111;283112;283113;283114;283115;283116;283117;283118;283119;283120;283121;283122 224156;224157;224158;224159;224160;224161;224162;224163;224164;224165 224159 10 LVQLSSK Unmodified 773.4647 0.46470391 4423 Q9H6S3 EPS8L2 Epidermal growth factor receptor kinase substrate 8-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 27.739 23.462 2 0.03416 30775 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.265 6.6494 237000000 42795000 190080000 4123800 0 0 0 0 0 0 0 0 0 0 0 0 33695 4423 30789 283123;283124;283125 224166;224167 224166 2 LVQNCLWTLR Unmodified 1301.6914 0.69142616 1010;1341 P14923;P35222 JUP;CTNNB1 Junction plakoglobin;Catenin beta-1 no no 0 0 0 By MS/MS 10 0 1 1 78.352 77.879 2 0.011018 90330 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 54.982 35.887 16360000 0 0 0 16360000 0 0 0 0 0 0 0 0 0 0 0 33696 1010;1341 30790 283126 224168 224168 1 LVQNGPEVHPGANFIQQR Unmodified 2003.0337 0.03370675 217 O14802 POLR3A DNA-directed RNA polymerase III subunit RPC1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 58.751 58.833 3 8.8393E-06 66281 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.716 48.227 78504000 0 0 0 4591500 5366000 8337400 6492400 4736500 6463800 0 0 9760900 7629400 8117400 17008000 33697 217 30791 283127;283128;283129;283130;283131;283132;283133;283134;283135;283136 224169;224170;224171;224172;224173;224174;224175;224176;224177 224171 9 LVQNNLGGK Unmodified 941.52943 0.52942943 2834 Q5VZL5 ZMYM4 Zinc finger MYM-type protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 17.882 18.089 2 0.0049227 17736 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 85.265 62.336 47519000 0 0 0 2628800 3537200 0 3057200 3053100 3601100 4799100 4565600 5146800 5929900 4227300 6972700 33698 2834 30792 283137;283138;283139;283140;283141;283142;283143;283144;283145;283146;283147 224178;224179;224180;224181;224182;224183;224184;224185;224186;224187 224185 10 LVQQRPALPGLAR Unmodified 1417.8518 0.85176663 3100 Q7Z4Q2 HEATR3 HEAT repeat-containing protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 56.433 56.553 3 0.00027919 64276 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 65.395 43.764 170540000 0 0 0 7293100 5970600 24925000 9434700 9185800 0 18873000 12276000 22410000 17965000 13209000 29000000 33699 3100 30793 283148;283149;283150;283151;283152;283153;283154;283155;283156;283157;283158 224188;224189;224190;224191;224192;224193;224194;224195;224196;224197;224198;224199 224191 11 LVQSAQNEREK Unmodified 1300.6735 0.67352749 3453 Q8NG31 CASC5 Protein CASC5 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 6.8958 6.5033 3 0.00047081 6868 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 92.866 61.023 51094000 0 11063000 12506000 1080700 1783700 0 0 1612100 4026200 2996600 0 4115700 3146700 4350900 4412200 33700 3453 30794 283159;283160;283161;283162;283163;283164;283165;283166;283167;283168;283169 224200;224201;224202;224203 224202 4 LVQSPNSYFMDVK Oxidation (M) 1542.7388 0.73882986 3032;1460 P42677;Q71UM5 RPS27;RPS27L 40S ribosomal protein S27;40S ribosomal protein S27-like no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.579 67.661 2 7.0645E-13 77377 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 129.89 97.569 175650000 0 0 0 12543000 10873000 11461000 12016000 11232000 8458700 15264000 14922000 22998000 18407000 14837000 22635000 33701 1460;3032 30795 283170;283171;283172;283173;283174;283175;283176;283177;283178;283179;283180;283181 224204;224205;224206;224207;224208;224209;224210;224211;224212;224213;224214;224215;224216;224217;224218 224207 2291 15 LVQSPNSYFMDVK Unmodified 1526.7439 0.74391524 3032;1460 P42677;Q71UM5 RPS27;RPS27L 40S ribosomal protein S27;40S ribosomal protein S27-like no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 74.913 74.956 2 2.9511E-08 86439 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 107.06 50.797 71050000 0 0 0 3606100 4502400 0 3356300 8348600 4237800 8503400 10850000 10604000 7095800 9945000 0 33702 1460;3032 30795 283182;283183;283184;283185;283186;283187;283188;283189;283190;283191;283192 224219;224220;224221;224222;224223;224224;224225;224226;224227;224228;224229;224230;224231 224220 13 LVQTAAQQVAEDK Unmodified 1399.7307 0.73070802 2700 Q53FT3 C11orf73 Protein Hikeshi yes yes 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.741 36.923 2 3.215E-08 39659 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 131.42 99.987 220770000 0 0 0 9817200 10818000 21559000 11954000 14674000 10431000 19012000 20193000 17793000 20468000 15820000 48227000 33703 2700 30796 283193;283194;283195;283196;283197;283198;283199;283200;283201;283202;283203;283204 224232;224233;224234;224235 224232 3 LVQTAELTK Unmodified 1001.5757 0.57571092 1823 P60983;O60234 GMFB;GMFG Glia maturation factor beta;Glia maturation factor gamma yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.12 3.89 3 1 4 1 2 1 1 1 1 1 36.171 33.993 2 0.0037823 37525 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 88.948 38.821 1158500000 29171000 1018700000 14565000 0 0 0 0 0 0 0 25211000 16473000 0 17369000 36994000 33704 1823 30797 283205;283206;283207;283208;283209;283210;283211;283212 224236;224237;224238;224239;224240;224241 224240 6 LVQTPLTDR Unmodified 1041.5819 0.58185893 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.846 46.015 2 0.0052023 50682 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 80.438 37.315 241600000 0 0 0 12085000 12829000 21064000 12136000 15593000 10769000 19104000 21337000 24415000 29877000 30230000 32163000 33705 2392 30798 283213;283214;283215;283216;283217;283218;283219;283220;283221;283222;283223;283224 224242;224243;224244;224245;224246;224247;224248;224249 224246 7 LVQYLRECEDVMDWINDK Unmodified 2325.077 0.076953052 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS 2 0 1 1 93.498 85.368 3 0.00033335 110622 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.093 51.905 11558000 11558000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33706 2344 30799 283225 224250 224250 1 LVRERQEGEAK Unmodified 1313.7052 0.70516197 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 2 By MS/MS 2 0 1 1 7.0037 3.5715 3 0.016876 6631 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.751 44.359 298210000 298210000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33707 3676 30800 283226 224251 224251 1 LVRFPEDLENDIR Unmodified 1614.8366 0.83657007 228 O14929 HAT1 Histone acetyltransferase type B catalytic subunit yes yes 0 0 1 By MS/MS By matching By matching By MS/MS 10 0 4 1 1 1 1 77.534 77.694 3 0.00035656 88977 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.529 51.5 29949000 0 0 0 0 0 5889600 0 2870000 0 0 0 3264800 0 0 17924000 33708 228 30801 283227;283228;283229;283230 224252;224253 224253 1 LVSALSEASTFEDPQR Unmodified 1748.8581 0.85809337 3938 Q96NU1 SAMD11 Sterile alpha motif domain-containing protein 11 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 75.025 75.074 2 2.0909E-06 86539 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 83.182 57.796 20048000 0 0 0 0 3046000 0 4379600 4730400 3705900 0 0 0 4185800 0 0 33709 3938 30802 283231;283232;283233;283234;283235 224254;224255;224256 224254 3 LVSAVVEYGGK Unmodified 1120.6128 0.61282471 4612 Q9NRW7 VPS45 Vacuolar protein sorting-associated protein 45 yes yes 0 0 0 By MS/MS 2 0 1 1 55.826 50.011 2 0.039102 64713 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.535 32.925 31883000 0 31883000 0 0 0 0 0 0 0 0 0 0 0 0 0 33710 4612 30803 283236 224257 224257 0 LVSCPGPLDQDQQEAAR Unmodified 1882.8843 0.8843249 2285 Q13421 MSLN Mesothelin;Megakaryocyte-potentiating factor;Mesothelin, cleaved form yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 2 1 1 1 1 1 2 1 48.707 48.872 2;3 2.7963E-60 54135 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 165.7 141.95 196130000 0 0 0 10800000 11028000 7706900 9032600 17637000 13725000 18165000 16014000 40015000 16393000 21827000 13782000 33711 2285 30804 283237;283238;283239;283240;283241;283242;283243;283244;283245;283246;283247;283248;283249;283250 224258;224259;224260;224261;224262;224263;224264;224265;224266;224267;224268;224269;224270 224261 13 LVSDANEQYK Unmodified 1165.5615 0.56151742 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 22.088 21.196 2 0.0035119 22679 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 76.221 35.192 66185000 0 48050000 0 0 0 0 6379900 0 4841100 0 0 0 0 6914600 0 33712 5049 30805 283251;283252;283253;283254;283255;283256;283257;283258;283259 224271;224272;224273;224274;224275;224276;224277;224278;224279 224272 9 LVSDEMVVELIEK Oxidation (M) 1518.7851 0.78511135 1748 P54819 AK2 Adenylate kinase 2, mitochondrial;Adenylate kinase 2, mitochondrial, N-terminally processed yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.03 3.35 5 3 23 2 4 2 2 2 2 2 2 2 2 2 2 1 2 2 84.124 83.117 2 7.895E-13 96473 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 126.67 104.68 608510000 35460000 363490000 17222000 2886700 5505600 15137000 12192000 35895000 15695000 23167000 22330000 21728000 5168000 10271000 22364000 33713 1748 30806 283260;283261;283262;283263;283264;283265;283266;283267;283268;283269;283270;283271;283272;283273;283274;283275;283276;283277;283278;283279;283280;283281;283282;283283;283284;283285;283286;283287;283288;283289;283290 224280;224281;224282;224283;224284;224285;224286;224287;224288;224289;224290;224291;224292;224293;224294;224295;224296;224297;224298;224299;224300;224301;224302 224287 2840 20 LVSDEMVVELIEK Unmodified 1502.7902 0.79019673 1748 P54819 AK2 Adenylate kinase 2, mitochondrial;Adenylate kinase 2, mitochondrial, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 94.957 89.809 2 4.4313E-08 112832 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.2 112.45 286020000 123420000 149790000 12805000 0 0 0 0 0 0 0 0 0 0 0 0 33714 1748 30806 283291;283292;283293 224303;224304;224305;224306;224307 224304 5 LVSDGNINSDRIQEK Unmodified 1686.8537 0.8536767 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 16 1 1 2 1 1 1 1 1 2 2 1 2 35.444 35.694 2;3 0.0095568 38854 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 45.992 34.621 333080000 0 0 0 14270000 15002000 35936000 23999000 19849000 13784000 30902000 3226400 44528000 40068000 26051000 65468000 33715 2047 30807 283294;283295;283296;283297;283298;283299;283300;283301;283302;283303;283304;283305;283306;283307;283308;283309 224308;224309;224310;224311 224311 3 LVSDGQALPEMEIHLQTNAEK Oxidation (M) 2338.1475 0.14747546 2210 Q12931 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 69.667 67.981 3 2.5149E-05 86365 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.16 53.1 121950000 0 92711000 0 0 0 14882000 0 0 0 0 0 0 14359000 0 0 33716 2210 30808 283310;283311;283312 224312;224313 224313 3600 2 LVSDGQALPEMEIHLQTNAEK Unmodified 2322.1526 0.15256084 2210 Q12931 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 3 1 82.253 77.573 2;3 3.3983E-23 97581 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.06 95.502 312560000 12805000 295430000 4320100 0 0 0 0 0 0 0 0 0 0 0 0 33717 2210 30808 283313;283314;283315;283316;283317 224314;224315;224316;224317;224318;224319 224315 6 LVSDIIDPVALEIPLSK Unmodified 1821.0499 0.049916891 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 96.316 96.461 2 5.1556E-26 111990 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 111.12 87.747 16820000 0 0 0 0 0 0 0 0 0 4907300 3335300 0 0 1977200 6600100 33718 2804 30809 283318;283319;283320;283321 224320;224321;224322;224323 224321 4 LVSDSLSEHEK Unmodified 1242.6092 0.6091959 3913 Q96KR1 ZFR Zinc finger RNA-binding protein yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 1 2 2 2 2 2 2 2 2 2 2 2 24.637 24.857 2;3 0.00055755 25950 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 81.338 73.294 279340000 0 0 0 11762000 15162000 18246000 21933000 22412000 18068000 22186000 19470000 28079000 27979000 26272000 47769000 33719 3913 30810 283322;283323;283324;283325;283326;283327;283328;283329;283330;283331;283332;283333;283334;283335;283336;283337;283338;283339;283340;283341;283342;283343;283344 224324;224325;224326;224327;224328;224329;224330;224331;224332;224333;224334;224335;224336;224337 224334 12 LVSDTITQK Unmodified 1003.555 0.55497548 2086 Q03001 DST Dystonin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 29.147 29.208 2 0.042904 31333 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 43.808 17.115 85569000 0 0 0 8166200 7524800 14398000 0 0 10922000 10607000 17500000 0 16451000 0 0 33720 2086 30811 283345;283346;283347;283348;283349;283350;283351 224338 224338 1 LVSELWDAGIK Unmodified 1229.6656 0.66558856 961 P12081 HARS Histidine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.42 3.66 3 1 8 1 2 1 1 1 1 1 1 1 1 1 81.15 79.325 2 1.7418E-05 99088 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.18 88.704 748770000 27697000 538570000 103620000 7177200 0 0 0 9262700 0 0 12086000 0 6096000 9998300 34258000 33721 961 30812 283352;283353;283354;283355;283356;283357;283358;283359;283360;283361;283362;283363 224339;224340;224341;224342;224343;224344;224345;224346;224347;224348;224349 224340 11 LVSESSDVLPK Unmodified 1172.6289 0.62886871 67 CON__P05787;P05787 KRT8 Keratin, type II cytoskeletal 8 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.39 3.71 1 3 2 12 3 2 1 1 1 1 1 1 1 1 1 1 1 1 1 52.409 51.251 2 5.3063E-09 60799 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.4 94.557 + 14606000000 151250000 2616100000 25118000 662690000 774700000 913200000 882960000 724260000 735280000 1191900000 1238900000 1387100000 1081000000 849110000 1372500000 33722 67 30813 283364;283365;283366;283367;283368;283369;283370;283371;283372;283373;283374;283375;283376;283377;283378;283379;283380;283381 224350;224351;224352;224353;224354;224355;224356;224357;224358;224359;224360;224361;224362;224363;224364;224365;224366;224367;224368;224369;224370;224371;224372;224373;224374;224375;224376;224377;224378;224379;224380 224358 31 LVSEYMSK Oxidation (M) 971.46338 0.46338328 955 P11766 ADH5 Alcohol dehydrogenase class-3 yes yes 0 1 0 By MS/MS By MS/MS 2 0 4 2 2 22.092 17.745 2 0.016951 23086 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.794 39.727 703880000 26461000 677420000 0 0 0 0 0 0 0 0 0 0 0 0 0 33723 955 30814 283382;283383;283384;283385 224381;224382;224383 224381 1237 3 LVSEYMSK Unmodified 955.46847 0.46846866 955 P11766 ADH5 Alcohol dehydrogenase class-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.57 3.96 3 4 1 1 1 1 1 1 1 35.439 33.619 2 0.010563 45717 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 112.17 63.668 1259300000 46418000 1100500000 24251000 0 0 0 0 0 0 0 16217000 17464000 0 12291000 42135000 33724 955 30814 283386;283387;283388;283389;283390;283391;283392 224384;224385;224386;224387;224388 224386 5 LVSGLEAKPDR Unmodified 1183.6561 0.65608651 255 O15119 TBX3 T-box transcription factor TBX3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 29.779 29.971 2;3 0.00022993 32497 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 88.596 65.955 570210000 0 0 0 32475000 33103000 33369000 38991000 45386000 36152000 44575000 48768000 79177000 68787000 42714000 66711000 33725 255 30815 283393;283394;283395;283396;283397;283398;283399;283400;283401;283402;283403;283404;283405;283406;283407;283408;283409;283410;283411;283412;283413;283414;283415;283416 224389;224390;224391;224392;224393;224394;224395;224396;224397;224398;224399;224400;224401;224402;224403;224404 224393 14 LVSGNSIEEK Unmodified 1074.5557 0.55570376 3915 Q96L91 EP400 E1A-binding protein p400 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.907 24.112 2 0.00090231 24925 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 116.05 68.969 176150000 0 0 0 10350000 8399200 14334000 10677000 14813000 8591600 16157000 13836000 23263000 18837000 15547000 21343000 33726 3915 30816 283417;283418;283419;283420;283421;283422;283423;283424;283425;283426;283427;283428 224405;224406;224407;224408;224409;224410;224411;224412;224413;224414;224415;224416 224410 9 LVSGVLGSALTSGGPSLSAMGNGR Oxidation (M) 2203.1267 0.12668044 3061 Q7LBC6 KDM3B Lysine-specific demethylase 3B yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 2 2 1 1 2 1 1 2 81.396 81.518 2;3 4.8267E-23 94300 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 91.166 86.361 180750000 0 0 0 0 7481400 19948000 0 21413000 13847000 27376000 10111000 26683000 7835700 8734600 37316000 33727 3061 30817 283429;283430;283431;283432;283433;283434;283435;283436;283437;283438;283439;283440;283441;283442 224417;224418;224419;224420;224421;224422;224423;224424;224425;224426;224427;224428;224429 224418 4682 13 LVSIAGTRPSVR Unmodified 1254.7408 0.74081919 3807 Q96EB1 ELP4 Elongator complex protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 44.032 44.308 3 0.003857 49893 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.841 28.615 49509000 0 0 0 0 0 11219000 0 0 8344800 11644000 0 0 0 0 18301000 33728 3807 30818 283443;283444;283445;283446;283447;283448 224430;224431;224432;224433 224430 4 LVSIDSK Unmodified 760.43307 0.43306943 1124;487 P21333;O75369 FLNA;FLNB Filamin-A;Filamin-B no no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 26.57 25.625 2 0.014121 31576 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 121.29 38.907 4608500000 167110000 3656500000 64490000 30696000 28811000 47862000 35527000 35573000 23486000 56213000 93445000 93010000 52117000 66422000 157240000 33729 1124;487 30819 283449;283450;283451;283452;283453;283454;283455;283456;283457;283458;283459;283460;283461;283462;283463;283464 224434;224435;224436;224437;224438;224439;224440;224441;224442;224443 224442 10 LVSIGAEEIVDGNAK Unmodified 1513.7988 0.79878758 356 O43707 ACTN4 Alpha-actinin-4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3.66 3.09 1 37 9 11 6 34 7 1 1 1 1 1 1 1 1 1 1 1 78.781 75.984 2;3 1.3117E-60 86144 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 180.97 151.88 5513400000 396420000 4679200000 223930000 0 5392000 15722000 6176500 11825000 5099200 18807000 27569000 26570000 5823600 19017000 71850000 33730 356 30820 283465;283466;283467;283468;283469;283470;283471;283472;283473;283474;283475;283476;283477;283478;283479;283480;283481;283482;283483;283484;283485;283486;283487;283488;283489;283490;283491;283492;283493;283494;283495;283496;283497;283498;283499;283500;283501;283502;283503;283504;283505;283506;283507;283508;283509;283510;283511;283512;283513;283514;283515;283516;283517;283518;283519;283520;283521;283522 224444;224445;224446;224447;224448;224449;224450;224451;224452;224453;224454;224455;224456;224457;224458;224459;224460;224461;224462;224463;224464;224465;224466;224467;224468;224469;224470;224471;224472;224473;224474;224475;224476;224477;224478;224479;224480;224481;224482;224483;224484;224485;224486;224487;224488;224489;224490;224491;224492;224493;224494;224495;224496;224497;224498;224499;224500;224501;224502;224503;224504;224505;224506;224507;224508;224509;224510;224511;224512;224513;224514 224489 70 LVSIGAEEIVDGNVK Unmodified 1541.8301 0.83008771 971;1359 P12814;P35609 ACTN1;ACTN2 Alpha-actinin-1;Alpha-actinin-2 no no 0 0 0 By MS/MS By MS/MS By MS/MS 2.15 0.357 17 3 3 14 3 80.843 76.265 2 2.0823E-102 90771 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 217.02 189.27 1709100000 141240000 1494900000 72950000 0 0 0 0 0 0 0 0 0 0 0 0 33731 971;1359 30821 283523;283524;283525;283526;283527;283528;283529;283530;283531;283532;283533;283534;283535;283536;283537;283538;283539;283540;283541;283542 224515;224516;224517;224518;224519;224520;224521;224522;224523;224524;224525;224526;224527;224528;224529;224530;224531;224532;224533;224534;224535;224536;224537;224538;224539;224540;224541;224542 224515 24 LVSIVADQLEK Unmodified 1213.6918 0.69180331 271 O15294 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 71.989 70.819 2 6.9746E-05 81304 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 112.75 70.461 927800000 15350000 480740000 38359000 15832000 19505000 30575000 21542000 28080000 20617000 43877000 38824000 47627000 35082000 30148000 61639000 33732 271 30822 283543;283544;283545;283546;283547;283548;283549;283550;283551;283552;283553;283554;283555;283556;283557;283558 224543;224544;224545;224546;224547;224548;224549;224550;224551;224552;224553;224554;224555;224556;224557;224558 224552 15 LVSLIGSK Unmodified 815.51165 0.5116541 1193 P25786 PSMA1 Proteasome subunit alpha type-1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 50.989 51.14 2 0.0044044 57475 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 110.81 18.901 829330000 0 0 0 72945000 35732000 47979000 42329000 47458000 31948000 53273000 102260000 107460000 47454000 69380000 171110000 33733 1193 30823 283559;283560;283561;283562;283563;283564;283565;283566;283567;283568;283569;283570 224559;224560;224561;224562;224563;224564;224565;224566;224567;224568;224569;224570;224571 224563 13 LVSLPEEIGHLR Unmodified 1361.7667 0.76669959 3877 Q96II8 LRCH3 Leucine-rich repeat and calponin homology domain-containing protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.945 77.006 3 0.0010838 88391 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.695 59.035 61742000 0 0 0 1567200 1819200 5846900 3191100 4456300 4307800 6084800 3665600 5973700 2989400 4987100 16853000 33734 3877 30824 283571;283572;283573;283574;283575;283576;283577;283578;283579;283580;283581;283582 224572;224573;224574;224575;224576 224574 5 LVSLYFDTK Unmodified 1084.5805 0.58046195 129 O00231 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 74.887 74.934 2 0.0047986 86346 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 85.666 75.198 61466000 0 0 0 1683100 3669300 6981700 0 1891000 3175000 10764000 10547000 15060000 2075800 0 5619300 33735 129 30825 283583;283584;283585;283586;283587;283588;283589;283590;283591;283592 224577;224578;224579;224580 224578 4 LVSNHSLHETSSVFVDSLTK Unmodified 2199.1172 0.11716161 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS 10 0 1 1 69.393 69.859 3 0.0011528 79833 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.424 38.323 23042000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23042000 33736 1124 30826 283593 224581 224581 0 LVSPETEASEESLQFNLEK Unmodified 2149.0427 0.042659261 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 82.389 78.894 3 0.00040742 94377 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 53.536 47.419 302360000 0 299130000 3234100 0 0 0 0 0 0 0 0 0 0 0 0 33737 2203 30827 283594;283595;283596 224582;224583;224584 224584 3 LVSPGSANETSSILVESVTR Unmodified 2045.0641 0.064063405 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 80.775 80.834 2;3 4.5146E-47 93087 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 148.57 142.91 246960000 0 0 0 4453400 10883000 18419000 9197300 10358000 9129400 26870000 28770000 31501000 11423000 18737000 67222000 33738 487 30828 283597;283598;283599;283600;283601;283602;283603;283604;283605;283606;283607;283608;283609;283610;283611;283612;283613;283614;283615;283616;283617;283618;283619;283620 224585;224586;224587;224588;224589;224590;224591;224592;224593;224594;224595;224596;224597 224589 13 LVSQDNFGFDLPAVEAATK Unmodified 2021.0106 0.010571271 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 89.363 89.472 2 3.515E-17 103847 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 117.92 105.34 55304000 0 0 0 0 1259000 3182700 1493600 2080200 2220500 10564000 7728200 5791500 1468300 3652100 15863000 33739 2047 30829 283621;283622;283623;283624;283625;283626;283627;283628;283629;283630;283631 224598;224599;224600;224601;224602;224603;224604;224605;224606;224607 224604 10 LVSQEEMEFIQRGGPE Oxidation (M) 1863.8673 0.86727785 2001 P82909 MRPS36 28S ribosomal protein S36, mitochondrial yes yes 0 1 1 By MS/MS 2 0 1 1 68.778 62.878 2 0.00015482 80264 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.045 61.236 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33740 2001 30830 283632 224608 224608 3247 1 LVSQEPK Unmodified 799.44397 0.44396847 2608 Q16531 DDB1 DNA damage-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 9.7644 9.8766 2 0.029815 8766 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 75.311 20.546 107260000 0 0 0 7593000 5282900 6749200 6939900 5587800 3984600 7264800 0 16040000 9771800 11030000 27017000 33741 2608 30831 283633;283634;283635;283636;283637;283638;283639;283640;283641;283642;283643 224609;224610 224609 2 LVSQGLEALR Unmodified 1084.6241 0.6240581 4629 Q9NSK0 KLC4 Kinesin light chain 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.472 58.587 2 0.0035551 66073 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.064 29.638 97768000 0 0 0 5524100 6355200 8637500 5393500 6827000 5528500 7892800 9726700 10506000 7945900 7424100 16006000 33742 4629 30832 283644;283645;283646;283647;283648;283649;283650;283651;283652;283653;283654;283655 224611;224612;224613;224614;224615;224616;224617;224618;224619;224620;224621 224619 7 LVSQIEDAMRK Unmodified 1288.6809 0.68092105 3971 Q96RN5 MED15 Mediator of RNA polymerase II transcription subunit 15 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 55.428 54.174 3 0.0059014 74668 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.019 44.063 258210000 53387000 36932000 4774300 0 9183500 16022000 12791000 19630000 15540000 19327000 14401000 0 19590000 13638000 22996000 33743 3971 30833 283656;283657;283658;283659;283660;283661;283662;283663;283664;283665;283666;283667;283668 224622;224623;224624;224625;224626;224627;224628;224629;224630 224627 8 LVSQTGPVHAPIFTMSVEVDGNSFEASGPSK Unmodified 3187.5496 0.54957911 2207 Q12906 ILF3 Interleukin enhancer-binding factor 3 yes yes 0 0 0 By MS/MS 2 0 1 1 92.865 84.735 3 0.00066843 109787 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 33.044 26.817 10584000 10584000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33744 2207 30834 283669 224631 224631 1 LVSSAVSPSIIPQEDPSQQFLQQSLER Unmodified 2982.5298 0.52982995 3871 Q96HW7 INTS4 Integrator complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 2 89.514 89.66 3 4.9774E-14 104023 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 53.998 51.366 15474000 0 0 0 0 0 0 0 0 0 5798500 2482600 1873500 0 0 5319400 33745 3871 30835 283670;283671;283672;283673;283674 224632;224633;224634;224635 224632 4 LVSSDPEINTK Unmodified 1201.619 0.6190323 5087 Q9Y266 NUDC Nuclear migration protein nudC yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33.474 32.822 2 0.00032119 36171 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 104.22 67.826 1514700000 9116100 73518000 0 63762000 51894000 155860000 93333000 70738000 55717000 155710000 182750000 148280000 91074000 109810000 253090000 33746 5087 30836 283675;283676;283677;283678;283679;283680;283681;283682;283683;283684;283685;283686;283687;283688 224636;224637;224638;224639;224640;224641;224642;224643;224644;224645;224646;224647 224643 10 LVSSFLTTAK Unmodified 1065.607 0.60701105 3080 Q7Z3B3 KANSL1 KAT8 regulatory NSL complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 72.512 65.55 2 0.02041 86461 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.485 33.748 14987000 6872400 8114300 0 0 0 0 0 0 0 0 0 0 0 0 0 33747 3080 30837 283689;283690 224648 224648 1 LVSSHKPVQNQK Unmodified 1363.7572 0.75719754 231 O14965 AURKA Aurora kinase A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 6.2006 6.3338 3 0.015003 4120 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 29.544 14.668 18683000 0 0 0 1232100 1453300 0 2770000 1426200 918280 1537200 2694900 2224600 1419800 1205400 1800800 33748 231 30838 283691;283692;283693;283694;283695;283696;283697;283698;283699;283700;283701 224649 224649 1 LVSSPELGHDEFSTQALAR Unmodified 2056.0225 0.022532941 241 O15020 SPTBN2 Spectrin beta chain, non-erythrocytic 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 71.235 71.485 3 0.017574 82340 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 26.78 16.992 33013000 0 0 0 0 0 0 0 0 0 6045500 4476600 7047700 6602600 0 8840800 33749 241 30839 283702;283703;283704;283705;283706 224650;224651 224650 1 LVSSQEQDREQLIQK Unmodified 1799.9377 0.93774068 3509 Q8TDY2 RB1CC1 RB1-inducible coiled-coil protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 38.876 35.388 3 0.013003 44564 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 29.981 21.272 7658700 0 0 7658700 0 0 0 0 0 0 0 0 0 0 0 0 33750 3509 30840 283707 224652 224652 1 LVSSSNAMENASHQASVQVESLQEQLNVVSK Oxidation (M) 3328.6205 0.62051223 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 1 0 By MS/MS 10 0 1 1 79.455 79.553 3 5.7544E-25 92002 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 61.112 58.895 9134800 0 0 0 0 0 0 0 0 0 9134800 0 0 0 0 0 33751 2556 30841 283708 224653 224653 4201 1 LVSTATTAPPSTAPSGPGSVQK Unmodified 2053.0691 0.069148783 1607 P49848 TAF6 Transcription initiation factor TFIID subunit 6 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 21 1 2 2 2 1 2 2 2 2 2 1 2 47.435 47.631 2;3 0.028356 53760 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 35.891 22.691 103380000 0 0 0 2881900 6124500 7835900 7656900 2705300 6252400 10507000 9214500 15649000 11337000 3245700 19973000 33752 1607 30842 283709;283710;283711;283712;283713;283714;283715;283716;283717;283718;283719;283720;283721;283722;283723;283724;283725;283726;283727;283728;283729 224654;224655;224656 224656 3 LVSVLQNK Unmodified 899.54402 0.54401687 1578 P49588 AARS Alanine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 2 1 1 1 1 1 2 1 1 1 1 1 41.11 41.238 2 0.0074075 46901 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 124.59 71.04 888070000 0 0 0 39005000 23375000 57894000 38697000 37401000 29213000 64869000 125950000 99625000 56377000 87014000 228650000 33753 1578 30843 283730;283731;283732;283733;283734;283735;283736;283737;283738;283739;283740;283741;283742;283743 224657;224658;224659;224660;224661;224662;224663;224664;224665;224666;224667;224668;224669 224668 4 LVSVQEDAGK Unmodified 1044.5451 0.54513908 5104 Q9Y2I7 PIKFYVE 1-phosphatidylinositol 3-phosphate 5-kinase yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 25.527 25.518 2 0.0015191 27642 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 92.838 48.146 39420000 0 0 0 4987400 6161200 6094800 6803200 0 5788300 0 0 0 9585300 0 0 33754 5104 30844 283744;283745;283746;283747;283748;283749 224670;224671 224670 2 LVTAAGDQTAK Unmodified 1073.5717 0.57168818 4769 Q9NZJ0 DTL Denticleless protein homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16.13 15.704 2 0.00032485 15348 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 95.775 52.86 473610000 8222400 94346000 0 18545000 13835000 25046000 23703000 21681000 11406000 31776000 43787000 49795000 37172000 29025000 65269000 33755 4769 30845 283750;283751;283752;283753;283754;283755;283756;283757;283758;283759;283760;283761;283762;283763 224672;224673;224674;224675;224676;224677;224678;224679;224680;224681;224682;224683;224684 224682 11 LVTAELQEQK Unmodified 1157.6292 0.62920306 5355 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 31.402 31.583 2 0.0058805 34527 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 67.169 15.681 + 385290000 0 0 0 0 18483000 0 0 0 15822000 16144000 0 0 22418000 0 312420000 33756 5355 30846 283764;283765;283766;283767;283768 224685;224686;224687;224688;224689 224685 5 LVTANTIDQK Unmodified 1101.603 0.60298831 4617 Q9NRZ9 HELLS Lymphoid-specific helicase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 2 1 1 1 1 1 1 31.278 31.459 2 0.0055824 34613 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 68.371 40.546 306830000 0 0 0 14286000 18626000 27595000 22927000 19312000 20271000 29207000 37056000 39876000 21304000 22862000 33513000 33757 4617 30847 283769;283770;283771;283772;283773;283774;283775;283776;283777;283778;283779;283780;283781 224690;224691;224692;224693;224694;224695;224696;224697;224698;224699;224700 224690 6 LVTAYQR Unmodified 849.47085 0.47085192 4517 Q9HCK8 CHD8 Chromodomain-helicase-DNA-binding protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 23.037 23.368 2 0.023574 23956 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 92.692 41.656 51553000 0 0 0 0 7294000 0 0 0 0 8316800 11868000 13256000 0 0 10817000 33758 4517 30848 283782;283783;283784;283785;283786 224701;224702;224703 224703 3 LVTCLESLR Unmodified 1089.5852 0.58522975 4630 Q9NSV4 DIAPH3 Protein diaphanous homolog 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.378 63.471 2 0.0051431 72395 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 82.279 28.074 121220000 0 0 0 5154000 6864700 8617100 7783800 5995400 6573800 10395000 12712000 16919000 12677000 13779000 13752000 33759 4630 30849 283787;283788;283789;283790;283791;283792;283793;283794;283795;283796;283797;283798 224704;224705;224706;224707;224708;224709;224710;224711;224712;224713;224714;224715;224716 224710 13 LVTDCVAAMNPDAVLR Oxidation (M) 1759.8597 0.85969005 701 O95861 BPNT1 3'(2'),5'-bisphosphate nucleotidase 1 yes yes 0 1 0 By matching By matching By MS/MS 10 0 3 1 1 1 69.928 70.247 2 2.338E-07 80073 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.718 70.56 12113000 0 0 0 0 0 0 0 0 0 1666300 0 4912400 0 0 5534000 33760 701 30850 283799;283800;283801 224717 224717 845 1 LVTDCVAAMNPDAVLR Unmodified 1743.8648 0.86477543 701 O95861 BPNT1 3'(2'),5'-bisphosphate nucleotidase 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 81.437 81.574 2 3.284E-19 94009 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 105.65 82.423 32714000 0 0 0 0 0 3905600 0 0 0 0 3748400 4827500 0 4870200 15362000 33761 701 30850 283802;283803;283804;283805;283806 224718;224719;224720;224721 224718 4 LVTDLTK Unmodified 788.46437 0.46436956 64;65 CON__P02769;CON__P02768-1;P02768 ALB Serum albumin no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 4 2 24 1 4 1 2 2 2 2 2 2 2 2 2 2 2 2 34.054 33.239 1;2 0.017052 37011 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 114.72 21.128 + 8009800000 16502000 470900000 12152000 1381100000 705780000 303240000 372710000 1451300000 288110000 677300000 753960000 522230000 397860000 264060000 392600000 33762 65;64 30851 283807;283808;283809;283810;283811;283812;283813;283814;283815;283816;283817;283818;283819;283820;283821;283822;283823;283824;283825;283826;283827;283828;283829;283830;283831;283832;283833;283834;283835;283836 224722;224723;224724;224725;224726;224727;224728;224729;224730;224731;224732;224733;224734;224735;224736;224737;224738 224732 14 LVTDQNISENWR Unmodified 1473.7212 0.72120596 1176 P24666 ACP1 Low molecular weight phosphotyrosine protein phosphatase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 60.304 60.337 2 0.0017198 67921 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 78.655 42.321 34549000 0 0 0 0 2790500 7664000 0 4646600 0 5161000 0 0 5956200 8330500 0 33763 1176 30852 283837;283838;283839;283840;283841;283842;283843 224739;224740;224741;224742 224742 4 LVTDTAEILSR Unmodified 1216.6663 0.66631685 5298 Q9Y6X8 ZHX2 Zinc fingers and homeoboxes protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 64.677 64.77 2 0.00039146 74056 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 86.898 49.171 72288000 0 0 0 4976700 5783400 0 6553700 4942500 0 7832900 7771200 10384000 6463600 6089600 11490000 33764 5298 30853 283844;283845;283846;283847;283848;283849;283850;283851;283852;283853 224743;224744;224745;224746;224747;224748;224749;224750;224751;224752 224743 8 LVTEFSK Unmodified 822.44872 0.4487195 5010 Q9ULX3 NOB1 RNA-binding protein NOB1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 34.624 34.819 2 0.041071 39033 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 68.312 20.197 160840000 0 0 0 8085300 9386800 13709000 0 9961500 10503000 16451000 19278000 18009000 9799800 10476000 35181000 33765 5010 30854 283854;283855;283856;283857;283858;283859;283860;283861;283862;283863;283864 224753 224753 1 LVTELTNLIK Unmodified 1142.6911 0.69107503 3268 Q8IY18 SMC5 Structural maintenance of chromosomes protein 5 yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 87.116 83.479 2 0.0025191 104009 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.87 57.446 24419000 0 22032000 2386700 0 0 0 0 0 0 0 0 0 0 0 0 33766 3268 30855 283865;283866 224754 224754 1 LVTEMGTYATQSALSSSRPTK Oxidation (M) 2243.1104 0.11036167 1720 P53618 COPB1 Coatomer subunit beta yes yes 0 1 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.53 1.88 1 16 1 2 1 2 1 1 2 1 1 1 2 1 1 49.759 49.248 3 4.3343E-33 55547 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 121.63 106.38 335630000 25659000 0 0 31537000 8162300 62496000 0 20352000 46999000 28223000 0 32020000 32067000 25397000 22720000 33767 1720 30856 283867;283868;283869;283870;283871;283872;283873;283874;283875;283876;283877;283878;283879;283880;283881;283882;283883 224755;224756;224757;224758;224759;224760;224761;224762;224763;224764;224765;224766;224767;224768;224769 224757 2791 14 LVTEMGTYATQSALSSSRPTK Unmodified 2227.1154 0.11544705 1720 P53618 COPB1 Coatomer subunit beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65.309 64.76 3 3.212E-157 73515 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 204.29 190.46 507590000 118240000 0 0 10465000 13119000 44200000 17769000 29015000 19324000 34387000 41719000 40196000 25645000 33988000 79521000 33768 1720 30856 283884;283885;283886;283887;283888;283889;283890;283891;283892;283893;283894;283895;283896;283897 224770;224771;224772;224773;224774;224775;224776;224777;224778;224779;224780;224781;224782;224783;224784;224785;224786;224787;224788 224775 19 LVTEPLVLK Unmodified 1010.6376 0.6375829 378 O43896 KIF1C Kinesin-like protein KIF1C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 70.586 69.882 2 0.00031047 79699 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 132.57 123.62 414380000 0 121060000 6845800 21076000 23580000 20090000 22922000 17368000 18336000 28639000 25480000 36889000 24869000 19324000 27897000 33769 378 30857 283898;283899;283900;283901;283902;283903;283904;283905;283906;283907;283908;283909;283910;283911;283912 224789;224790;224791;224792;224793;224794;224795;224796;224797;224798;224799;224800 224793 8 LVTEQQSK Unmodified 931.49746 0.4974606 202 O14686 KMT2D Histone-lysine N-methyltransferase 2D yes yes 0 0 0 By MS/MS 2 0 1 1 8.3454 5.0978 2 0.029093 7507 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.046 31.652 8880300 0 8880300 0 0 0 0 0 0 0 0 0 0 0 0 0 33770 202 30858 283913 224801 224801 1 LVTFENVR Unmodified 976.53418 0.53418046 614 O94979 SEC31A Protein transport protein Sec31A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 53.181 53.322 2 0.0068357 59367 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 94.662 35.745 644300000 0 0 0 32571000 29443000 60124000 44319000 57685000 39651000 57743000 63831000 57549000 48636000 54485000 98260000 33771 614 30859 283914;283915;283916;283917;283918;283919;283920;283921;283922;283923;283924;283925 224802;224803;224804;224805;224806;224807;224808;224809;224810;224811;224812;224813;224814;224815;224816;224817;224818;224819;224820 224817 19 LVTGGGEEVDVHSLGAR Unmodified 1694.8588 0.85876208 2872 Q6DKJ4 NXN Nucleoredoxin yes yes 0 0 0 By MS/MS 10 0 1 1 53.593 54.251 3 0.027925 60816 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 26.837 15.194 10666000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10666000 33772 2872 30860 283926 224821 224821 1 LVTGGYDYDVK Unmodified 1228.5976 0.59756858 4693 Q9NW82 WDR70 WD repeat-containing protein 70 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 49.233 49.33 2 0.00057718 56501 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 80.688 66.886 259310000 0 0 0 21497000 20421000 0 29359000 21629000 0 0 47412000 0 29135000 31340000 58518000 33773 4693 30861 283927;283928;283929;283930;283931;283932;283933;283934 224822;224823;224824;224825;224826;224827;224828;224829 224828 7 LVTGIEELR Unmodified 1028.5866 0.58660996 2788 Q5T9S5 CCDC18 Coiled-coil domain-containing protein 18 yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 61.213 61.307 2 0.028187 69896 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 49.097 15.546 46001000 0 0 0 2867800 4067800 0 2877500 0 4531500 3934600 4989600 9371500 8220800 0 5139500 33774 2788 30862 283935;283936;283937;283938;283939;283940;283941;283942;283943 224830 224830 1 LVTLPDITSVAK Unmodified 1255.7388 0.73875351 3851 Q96GA7 SDSL Serine dehydratase-like yes yes 0 0 0 By MS/MS 2 0 1 1 86.919 82.11 2 0.0075029 102047 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.726 59.794 50519000 0 50519000 0 0 0 0 0 0 0 0 0 0 0 0 0 33775 3851 30863 283944 224831 224831 1 LVTLPVSFAQLK Unmodified 1314.7911 0.79112343 3738 Q96AG4 LRRC59 Leucine-rich repeat-containing protein 59 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 89.451 89.559 2 0.0043631 104102 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 70.1 55.893 60009000 0 0 0 0 3122800 5300300 2196900 6016200 5620200 8720300 4117300 6326400 2251900 3544500 12793000 33776 3738 30864 283945;283946;283947;283948;283949;283950;283951;283952;283953;283954;283955 224832;224833;224834;224835;224836;224837;224838;224839;224840 224839 9 LVTMFDK Oxidation (M) 868.43644 0.43644025 4556 Q9NPQ8 RIC8A Synembryn-A yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 35.196 35.238 2 0.032881 38809 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 63.306 35.052 55914000 0 0 0 5398600 5950000 9472500 6293600 5654100 4559400 10400000 0 8185200 0 0 0 33777 4556 30865 283956;283957;283958;283959;283960;283961;283962;283963 224841;224842 224841 2 LVTMQIWDTAGQER Oxidation (M) 1662.8036 0.80355538 1647 P51149 RAB7A Ras-related protein Rab-7a yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 2 2 1 1 2 2 2 2 2 1 69.363 69.572 2 3.3813E-12 80031 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 103.34 78.998 92407000 0 0 0 0 0 6514000 4118000 5742600 3735600 12614000 17934000 19529000 10392000 5632200 6195200 33778 1647 30866 283964;283965;283966;283967;283968;283969;283970;283971;283972;283973;283974;283975;283976;283977;283978;283979;283980 224843;224844;224845;224846;224847;224848;224849;224850;224851;224852;224853;224854;224855;224856;224857;224858;224859;224860;224861 224858 2658 17 LVTMQIWDTAGQER Unmodified 1646.8086 0.80864076 1647 P51149 RAB7A Ras-related protein Rab-7a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 80.1 80.203 2 6.7344E-09 92281 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 119.39 101.58 57780000 0 0 0 0 2288600 4262800 2009600 5976100 3554700 7793800 7105200 6982700 3294900 0 14512000 33779 1647 30866 283981;283982;283983;283984;283985;283986;283987;283988;283989;283990 224862;224863;224864;224865;224866;224867;224868;224869;224870;224871 224865 10 LVTNQSTSEDQPLFK Unmodified 1705.8523 0.85227972 4508 Q9HC77 CENPJ Centromere protein J yes yes 0 0 0 By MS/MS 2 0 1 1 63.172 57.279 2 0.01008 73515 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.555 52.883 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33780 4508 30867 283991 224872 224872 1 LVTPEDDELDELRPGQR Unmodified 1980.9752 0.9752484 2167 Q08AM6 VAC14 Protein VAC14 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 68.511 68.64 3 0.0011581 79162 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 49.049 39.491 143260000 0 0 0 4937500 0 20271000 0 11598000 7766800 17872000 19046000 20936000 9638300 15368000 15823000 33781 2167 30868 283992;283993;283994;283995;283996;283997;283998;283999;284000;284001 224873;224874;224875;224876;224877;224878 224876 2 LVTQDTENELK Unmodified 1288.6511 0.65106071 1669;1450 P42229;P51692 STAT5A;STAT5B Signal transducer and activator of transcription 5A;Signal transducer and activator of transcription 5B no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 35.761 35.917 2 0.00013816 39077 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 109.44 77.119 90756000 0 0 0 5578600 4924400 13028000 7701100 5681000 4434100 10244000 0 7331700 10204000 9999300 11631000 33782 1450;1669 30869 284002;284003;284004;284005;284006;284007;284008;284009;284010;284011;284012 224879;224880;224881;224882;224883;224884;224885;224886;224887;224888;224889;224890 224888 12 LVTQIIK Unmodified 813.53239 0.53238955 3970 Q96RL7 VPS13A Vacuolar protein sorting-associated protein 13A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.582 47.746 2 0.030787 52621 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 74.415 16.248 123830000 0 0 0 6374400 7134900 10009000 9213500 12253000 8755900 11625000 12438000 12737000 11784000 10429000 11076000 33783 3970 30870 284013;284014;284015;284016;284017;284018;284019;284020;284021;284022;284023;284024 224891;224892;224893;224894 224892 4 LVTSGAESGNLNTSPSSNQTR Unmodified 2119.0142 0.014153099 3460 Q8NHV4 NEDD1 Protein NEDD1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 2 2 2 2 1 2 2 2 1 2 2 37.409 37.615 2;3 8.9862E-59 41422 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 161.84 149.68 122210000 0 0 0 4903100 8986700 11602000 8761000 8780900 4763900 12764000 16094000 11293000 7302500 9387100 17573000 33784 3460 30871 284025;284026;284027;284028;284029;284030;284031;284032;284033;284034;284035;284036;284037;284038;284039;284040;284041;284042;284043;284044;284045 224895;224896;224897;224898;224899;224900;224901;224902;224903;224904 224899 10 LVTSGAESGNLNTSPSSNQTRNSEK Unmodified 2577.2267 0.22666507 3460 Q8NHV4 NEDD1 Protein NEDD1 yes yes 0 0 1 By MS/MS 2 0 1 1 34.377 31.07 3 0.00094273 39257 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 38.583 31.05 4714400 0 0 4714400 0 0 0 0 0 0 0 0 0 0 0 0 33785 3460 30872 284046 224905;224906 224906 2 LVTSIGDVVNHDPVVGDRLK Unmodified 2132.159 0.15896684 939 P11216 PYGB Glycogen phosphorylase, brain form yes yes 0 0 1 By MS/MS 2 0 1 1 81.681 73.55 4 0.0002426 96364 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.866 43.924 27176000 27176000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33786 939 30873 284047 224907 224907 1 LVTTSETYVK Unmodified 1139.6074 0.60740498 5006 Q9ULV0 MYO5B Unconventional myosin-Vb yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.336 37.516 2 0.045286 41579 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 45.161 29.28 50902000 0 0 0 3145500 3563000 4701200 4081900 3633800 2447800 4588500 5341900 6438000 4528100 2964200 5467900 33787 5006 30874 284048;284049;284050;284051;284052;284053;284054;284055;284056;284057;284058;284059 224908 224908 1 LVTTVTEIAG Unmodified 1002.5597 0.55972651 2055 Q01518 CAP1 Adenylyl cyclase-associated protein 1 yes yes 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 1 1 2 1 1 2 2 2 2 2 2 68.436 68.579 1;2 0.00038057 78600 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 130.77 107.87 366670000 0 0 0 15507000 8045800 23046000 16741000 8249800 9020100 46858000 53177000 46995000 21038000 34980000 83015000 33788 2055 30875 284060;284061;284062;284063;284064;284065;284066;284067;284068;284069;284070;284071;284072;284073;284074;284075;284076;284077;284078 224909;224910 224910 1 LVVADREEVEQEADNILK Unmodified 2069.0641 0.064063405 4372 Q9H2P9 DPH5 Diphthine synthase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.29 0.452 5 2 2 3 2 83.121 78.898 2;3 7.8042E-13 98843 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.84 74.282 482130000 194240000 228010000 59881000 0 0 0 0 0 0 0 0 0 0 0 0 33789 4372 30876 284079;284080;284081;284082;284083;284084;284085 224911;224912;224913;224914;224915;224916;224917 224911 6 LVVADTR Unmodified 772.4443 0.44430282 1137 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.471 22.676 2 0.025177 23953 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 81.297 28.614 761630000 0 0 0 29930000 17954000 40254000 29644000 24966000 18543000 63930000 98227000 103640000 42170000 92393000 199980000 33790 1137 30877 284086;284087;284088;284089;284090;284091;284092;284093;284094;284095;284096;284097 224918;224919;224920 224919 3 LVVAHELGEAFNK Unmodified 1425.7616 0.76161421 3745 Q96AY4 TTC28 Tetratricopeptide repeat protein 28 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 65.267 65.41 2 0.027864 74874 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 32.415 11.043 54855000 0 0 0 3489800 0 5817900 6219100 4588700 3242600 4334900 6115800 3614700 3408100 4457500 9566000 33791 3745 30878 284098;284099;284100;284101;284102;284103;284104;284105;284106;284107;284108 224921 224921 1 LVVDLTDIDPDVAYSSVPYEK Unmodified 2337.1628 0.1627744 896 P09960 LTA4H Leukotriene A-4 hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.43 2.72 4 2 1 3 2 1 1 93.523 89.205 2;3 2.7449E-43 112244 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.04 120.07 289190000 85668000 188290000 13021000 0 0 0 0 0 0 0 0 0 0 0 2208900 33792 896 30879 284109;284110;284111;284112;284113;284114;284115 224922;224923;224924;224925;224926;224927;224928 224922 6 LVVDSHVQYR Unmodified 1214.6408 0.6407708 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 1 1 2 2 1 2 2 2 2 2 2 38.629 38.886 2;3 0.0023822 42957 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 81.594 42.446 299520000 0 0 0 13159000 12440000 12378000 19912000 20743000 13308000 22986000 35062000 35100000 32775000 32854000 48802000 33793 2930 30880 284116;284117;284118;284119;284120;284121;284122;284123;284124;284125;284126;284127;284128;284129;284130;284131;284132;284133;284134;284135 224929;224930;224931;224932;224933;224934;224935;224936;224937;224938;224939;224940 224936 7 LVVECVMNNVTCTR Oxidation (M) 1709.7899 0.78989593 2054 Q01469 FABP5 Fatty acid-binding protein, epidermal yes yes 0 1 0 By MS/MS 10 0 2 2 55.296 54.637 2 1.0288E-20 62170 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 143.79 131.21 55732000 0 0 0 55732000 0 0 0 0 0 0 0 0 0 0 0 33794 2054 30881 284136;284137 224941;224942 224941 3337 2 LVVECVMNNVTCTR Unmodified 1693.795 0.79498131 2054 Q01469 FABP5 Fatty acid-binding protein, epidermal yes yes 0 0 0 By MS/MS 10 0 1 1 75.248 74.728 2 4.9333E-19 86578 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 132.76 115.74 37794000 0 0 0 37794000 0 0 0 0 0 0 0 0 0 0 0 33795 2054 30881 284138 224943 224943 1 LVVEEYYEVLDHCSSILNK Unmodified 2309.1249 0.1249491 123 O00170 AIP AH receptor-interacting protein yes yes 0 0 0 By MS/MS 2 0 1 1 93.569 85.438 3 6.1577E-07 110582 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.049 80.23 28969000 28969000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33796 123 30882 284139 224944;224945 224944 2 LVVENVDVLTQMR Oxidation (M) 1530.8076 0.80757813 5094 Q9Y2A7 NCKAP1 Nck-associated protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 76.035 76.126 2 0.00049636 87871 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 71.03 46.176 35099000 0 0 0 0 1765400 4178000 2477100 2500400 2441900 6192300 3457200 6566400 2793300 2726500 0 33797 5094 30883 284140;284141;284142;284143;284144;284145;284146;284147;284148;284149 224946;224947;224948;224949 224946 6493 4 LVVFPTDDISLK Unmodified 1345.7493 0.74931819 1315 P32004 L1CAM Neural cell adhesion molecule L1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 85.103 85.234 2 0.037029 98944 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 35.541 17.102 13073000 0 0 0 0 0 0 0 0 0 2870300 0 3935800 0 3270200 2997200 33798 1315 30884 284150;284151;284152;284153 224950 224950 1 LVVGDSLK Unmodified 829.49092 0.49091866 1546 P48634 PRRC2A Protein PRRC2A yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 41.636 41.939 2 0.029639 45479 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.014 9.2121 46018000 0 0 0 0 0 7274500 5669400 0 0 7474400 9294400 0 5249200 0 11056000 33799 1546 30885 284154;284155;284156;284157;284158;284159 224951;224952 224952 2 LVVLGSGGVGK Unmodified 984.59678 0.59678072 1840;1914 P61224;P62834 RAP1B;RAP1A Ras-related protein Rap-1b;Ras-related protein Rap-1A no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 53.46 52.145 2 0.00030194 59207 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 94.309 59.502 713840000 125910000 82065000 8386200 26192000 24969000 29479000 28780000 37976000 24281000 55577000 56676000 51335000 44158000 33826000 84229000 33800 1840;1914 30886 284160;284161;284162;284163;284164;284165;284166;284167;284168;284169;284170;284171;284172;284173;284174;284175 224953;224954;224955;224956;224957;224958;224959;224960;224961;224962;224963;224964;224965 224961 1 LVVLGSSQESNSK Unmodified 1346.7042 0.70415892 3745 Q96AY4 TTC28 Tetratricopeptide repeat protein 28 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.64 2.9 1 1 9 2 1 1 1 1 1 1 1 1 1 40.128 39.198 2 2.3265E-08 49765 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.38 67.783 63362000 0 32699000 0 0 2792400 6275000 3777800 0 0 3354400 0 5461700 0 3399700 5602400 33801 3745 30887 284176;284177;284178;284179;284180;284181;284182;284183;284184;284185;284186 224966;224967;224968;224969;224970;224971;224972;224973;224974;224975 224968 9 LVVNLLQLSK Unmodified 1125.7121 0.71214483 2269 Q13315 ATM Serine-protein kinase ATM yes yes 0 0 0 By MS/MS 10 0 1 1 85.173 85.341 2 0.044293 98598 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.756 34.662 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33802 2269 30888 284187 224976 224976 1 LVVNYLR Unmodified 875.52289 0.52288749 457 O75128 COBL Protein cordon-bleu yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 1 1 2 58.389 58.542 2 0.027199 65589 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.72 38.501 73043000 0 0 0 3224100 3530300 4161200 4948700 3819500 4075200 6162700 6575500 8723800 5032200 4114800 18675000 33803 457 30889 284188;284189;284190;284191;284192;284193;284194;284195;284196;284197;284198;284199;284200 224977;224978;224979;224980 224978 4 LVVPASQCGSLIGK Unmodified 1427.7806 0.7806351 2521 Q15366;P57721 PCBP2;PCBP3 Poly(rC)-binding protein 2;Poly(rC)-binding protein 3 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.569 66.654 2 6.2665E-14 75456 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 115.18 96.395 2020200000 0 0 0 81274000 108960000 134180000 149940000 150340000 102300000 186800000 213250000 173140000 185340000 214210000 320530000 33804 2521 30890 284201;284202;284203;284204;284205;284206;284207;284208;284209;284210;284211;284212 224981;224982;224983;224984;224985;224986;224987;224988;224989;224990;224991;224992;224993 224984 13 LVVPATQCGSLIGK Unmodified 1441.7963 0.79628516 2520 Q15365 PCBP1 Poly(rC)-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.656 69.731 2 4.9291E-14 79237 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 115.18 48.58 1594500000 0 0 0 73466000 94497000 111640000 119910000 116600000 78102000 130950000 181540000 144180000 114580000 156380000 272660000 33805 2520 30891 284213;284214;284215;284216;284217;284218;284219;284220;284221;284222;284223;284224 224994;224995;224996;224997;224998;224999;225000;225001;225002;225003;225004;225005 224996 11 LVVPELSSR Unmodified 998.57605 0.57604528 434 O60826 CCDC22 Coiled-coil domain-containing protein 22 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 64.021 64.096 2 0.019227 74248 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 54.157 15.351 69485000 0 0 0 4068100 3948700 8821900 7400900 0 0 7402100 7838300 8283100 6377200 4801800 10543000 33806 434 30892 284225;284226;284227;284228;284229;284230;284231;284232;284233;284234 225006;225007 225007 2 LVVPELSSRGEPR Unmodified 1437.794 0.79397698 434 O60826 CCDC22 Coiled-coil domain-containing protein 22 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 58.281 58.328 3 0.0083177 65591 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.095 25.153 35137000 0 0 0 4381600 2500100 0 0 0 3702400 6442100 6675700 0 4849700 0 6585300 33807 434 30893 284235;284236;284237;284238;284239;284240;284241 225008 225008 1 LVVPTHGNSSAAVSTPK Unmodified 1663.8893 0.88933392 5199 Q9Y4F3 KIAA0430 Meiosis arrest female protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.693 41.87 3 0.0017042 45595 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.618 41.446 114730000 0 0 0 5152000 5047900 8274500 6108700 8441200 8191100 9449100 10495000 14585000 15088000 9194200 14702000 33808 5199 30894 284242;284243;284244;284245;284246;284247;284248;284249;284250;284251;284252;284253 225009;225010;225011;225012;225013;225014;225015;225016;225017;225018 225011 10 LVVQIDNAK Unmodified 998.57605 0.57604528 86;87;94;111 CON__Q497I4;CON__Q14525;Q14525;CON__Q15323;CON__Q9UE12;Q15323;CON__REFSEQ:XP_986630 KRT33B;KRT31 Keratin, type I cuticular Ha3-II;Keratin, type I cuticular Ha1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 2 45.997 46.362 2 3.2492E-05 52114 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 151.27 66.205 + 197750000 0 0 0 0 0 6651400 4755100 106490000 0 7915500 0 6534900 0 5328400 60072000 33809 94;86;87;111 30895 284254;284255;284256;284257;284258;284259;284260;284261 225019;225020;225021;225022 225022 4 LVVQSAAPGSK Unmodified 1055.5975 0.597509 1142 P22670 RFX1 MHC class II regulatory factor RFX1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.019 28.213 2 0.0031074 29282 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.711 37.457 105040000 0 0 0 8346600 6005500 11335000 7336200 7461700 6007700 9630800 10269000 10827000 9111900 8209100 10496000 33810 1142 30896 284262;284263;284264;284265;284266;284267;284268;284269;284270;284271;284272;284273 225023;225024;225025;225026;225027;225028;225029;225030;225031;225032;225033;225034;225035 225026 13 LVVSTQTALA Unmodified 1001.5757 0.57571092 65 CON__P02769 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.31 2.4 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 67.643 68.13 2 0.020737 72667 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 47.067 24.575 + 1412500000 42108000 0 0 101290000 227760000 68168000 89909000 68400000 72058000 188000000 185060000 138240000 69945000 75917000 85682000 33811 65 30897 284274;284275;284276;284277;284278;284279;284280;284281;284282;284283;284284;284285;284286 225036;225037;225038;225039;225040 225038 4 LVVTNLDK Unmodified 900.52803 0.52803245 5094 Q9Y2A7 NCKAP1 Nck-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 42.52 42.711 2 0.018652 47855 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 64.265 7.0871 85806000 0 0 0 7570300 5935200 0 6866600 0 4887500 10902000 9734500 10886000 7632000 6833100 14559000 33812 5094 30898 284287;284288;284289;284290;284291;284292;284293;284294;284295;284296 225041;225042;225043;225044;225045;225046;225047;225048;225049;225050 225042 10 LVVVDENDVVK Unmodified 1227.6711 0.67106787 1742 P54619 PRKAG1 5'-AMP-activated protein kinase subunit gamma-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 58.942 59.041 2 0.00053837 67836 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 81.972 62.185 185930000 0 0 0 12542000 12295000 19778000 16130000 14089000 0 22644000 20885000 23518000 0 12323000 31728000 33813 1742 30899 284297;284298;284299;284300;284301;284302;284303;284304;284305;284306 225051;225052;225053;225054;225055;225056;225057 225057 7 LVVVGAGGVGK Unmodified 954.58622 0.58621603 744 P01111;P01116;P01112 NRAS;KRAS;HRAS GTPase NRas;GTPase KRas;GTPase KRas, N-terminally processed;GTPase HRas;GTPase HRas, N-terminally processed yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 47.811 46.52 2 0.00058475 51376 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 80.438 59.284 480030000 140740000 71322000 5938200 14344000 15053000 16718000 19262000 15975000 14161000 22953000 33922000 32752000 23793000 19889000 33204000 33814 744 30900 284307;284308;284309;284310;284311;284312;284313;284314;284315;284316;284317;284318;284319;284320;284321;284322 225058;225059;225060;225061;225062;225063;225064;225065;225066;225067;225068;225069;225070;225071;225072 225068 12 LVVVGGGGVGK Unmodified 940.57057 0.57056597 1870 P62070;P10301 RRAS2;RRAS Ras-related protein R-Ras2;Ras-related protein R-Ras yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.413 41.591 2 0.010008 45734 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 49.96 15.153 56283000 0 0 0 3022900 4269700 4313700 3028100 3489800 3415300 5136200 5455300 8457500 4738300 4809300 6147000 33815 1870 30901 284323;284324;284325;284326;284327;284328;284329;284330;284331;284332;284333;284334 225073;225074;225075;225076 225076 4 LVVVISNIESGEVLERWQFDIECDK Unmodified 2976.4903 0.49027332 2261 Q13257 MAD2L1 Mitotic spindle assembly checkpoint protein MAD2A yes yes 0 0 1 By MS/MS 3 0 1 1 97.706 94.194 3 0.0003686 97626 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 42.325 39.949 1813800 1813800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33816 2261 30902 284335 225077;225078 225077 2 LVVVLNK Unmodified 783.52182 0.52182486 1799 P57772 EEFSEC Selenocysteine-specific elongation factor yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 55.613 49.565 2 0.037244 67644 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.939 26.891 44093000 42066000 0 2026900 0 0 0 0 0 0 0 0 0 0 0 0 33817 1799 30903 284336;284337 225079 225079 1 LVWIETPTNPTQK Unmodified 1525.814 0.81404372 1325 P32929 CTH Cystathionine gamma-lyase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 1 76.722 75.275 2;3 1.7113E-19 86706 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 152.54 125.87 329600000 121440000 43993000 14970000 3591800 3462300 4898400 3763100 3681700 0 8136400 20588000 21929000 5489600 18297000 55356000 33818 1325 30904 284338;284339;284340;284341;284342;284343;284344;284345;284346;284347;284348;284349;284350;284351;284352 225080;225081;225082;225083;225084;225085;225086;225087;225088;225089;225090;225091;225092;225093;225094;225095;225096;225097 225084 18 LVWVPSDK Unmodified 942.51747 0.51746776 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 60.481 58.958 2 0.0043249 67147 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 111.82 102.58 4877500000 302580000 1211400000 97744000 0 324910000 0 338030000 338850000 326960000 410900000 532860000 562360000 430880000 0 0 33819 1356 30905 284353;284354;284355;284356;284357;284358;284359;284360;284361;284362;284363 225098;225099;225100;225101;225102;225103;225104;225105;225106;225107;225108;225109 225105 12 LVYADTIK Unmodified 921.51713 0.51713341 3592 Q8WXI4 ACOT11 Acyl-coenzyme A thioesterase 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 44.216 44.228 2 0.030437 49596 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 55.531 34.23 69296000 0 0 0 0 12938000 8548200 11408000 12802000 10565000 13035000 0 0 0 0 0 33820 3592 30906 284364;284365;284366;284367;284368;284369 225110;225111;225112 225110 3 LVYDGIR Unmodified 834.45995 0.45995289 1340 P35221 CTNNA1 Catenin alpha-1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.676 43.849 2 0.027443 48655 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 77.496 30.729 566530000 0 0 0 77169000 23778000 37117000 29499000 35411000 23677000 57998000 60347000 64758000 46274000 33082000 77417000 33821 1340 30907 284370;284371;284372;284373;284374;284375;284376;284377;284378;284379;284380;284381 225113 225113 1 LVYDGIRDIR Unmodified 1218.6721 0.67207093 1340 P35221 CTNNA1 Catenin alpha-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.112 56.237 3 0.021417 62896 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 34.692 12.218 170910000 0 0 0 10311000 9484300 18697000 12022000 11732000 8279000 16637000 16001000 18739000 12723000 11973000 24312000 33822 1340 30908 284382;284383;284384;284385;284386;284387;284388;284389;284390;284391;284392;284393 225114;225115 225114 2 LVYDRETGKPK Unmodified 1304.7089 0.70885036 1329;4333 P33240;Q9H0L4 CSTF2;CSTF2T Cleavage stimulation factor subunit 2;Cleavage stimulation factor subunit 2 tau variant no no 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.082 15.253 3 0.019783 14278 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 56.359 36.152 216410000 0 0 0 9724300 8039600 5568700 12087000 10979000 6797200 15567000 32407000 29337000 25010000 24048000 36845000 33823 1329;4333 30909 284394;284395;284396;284397;284398;284399;284400;284401;284402;284403;284404;284405 225116 225116 1 LVYFQGTK Unmodified 954.51747 0.51746776 3136 Q86TI2 DPP9 Dipeptidyl peptidase 9 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 52.421 46.409 2 0.032367 63462 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.255 52.553 116360000 109400000 0 6961100 0 0 0 0 0 0 0 0 0 0 0 0 33824 3136 30910 284406;284407 225117 225117 1 LVYHIGLTPAK Unmodified 1210.7074 0.7073938 4981 Q9UKZ1 CNOT11 CCR4-NOT transcription complex subunit 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 60.803 60.269 3 0.0083307 68227 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 39.785 21.113 151270000 18258000 0 0 7182200 9276600 11079000 10026000 9822300 7215300 11093000 9711500 12383000 11514000 11298000 22411000 33825 4981 30911 284408;284409;284410;284411;284412;284413;284414;284415;284416;284417;284418;284419;284420 225118;225119;225120;225121;225122;225123;225124;225125;225126 225118 7 LVYILNR Unmodified 889.53854 0.53853756 2528 Q15393 SF3B3 Splicing factor 3B subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.245 61.346 2 0.023593 69941 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 92.785 26.888 476730000 0 0 0 15441000 24742000 30940000 33664000 37143000 21168000 45432000 47428000 48073000 41183000 54278000 77242000 33826 2528 30912 284421;284422;284423;284424;284425;284426;284427;284428;284429;284430;284431;284432 225127;225128;225129;225130 225129 3 LVYLVENPGGYVAYSK Unmodified 1770.9192 0.91923707 762 P02786 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 80.514 80.56 2 0.00023459 93330 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 87.498 64.272 67851000 0 0 0 1189300 4609000 4508800 3509500 8271900 4682100 11922000 7800100 11552000 3492700 6313500 0 33827 762 30913 284433;284434;284435;284436;284437;284438;284439;284440;284441;284442;284443 225131;225132;225133;225134;225135;225136;225137;225138;225139 225139 9 LVYQIIEDAGNK Unmodified 1361.7191 0.7190807 4347 Q9H1D9 POLR3F DNA-directed RNA polymerase III subunit RPC6 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching 7.33 3.77 2 4 1 1 1 1 1 1 74.103 72.917 2 8.117E-37 91546 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 196.32 138.36 132880000 0 89031000 26653000 0 0 3897700 3024400 5585700 0 4684100 0 0 0 0 0 33828 4347 30914 284444;284445;284446;284447;284448;284449 225140;225141;225142 225140 2 LVYVCDPVLGDK Unmodified 1376.701 0.70098779 181 O00764 PDXK Pyridoxal kinase yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 73.399 73.569 2 0.00016226 84137 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.533 63.447 62961000 0 0 0 0 0 9667000 0 0 0 0 0 0 0 14419000 38875000 33829 181 30915 284450;284451;284452;284453 225143;225144;225145 225143 3 LVYVDLLREEPDAK Unmodified 1658.8879 0.88793694 2989 Q6W2J9 BCOR BCL-6 corepressor yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 78.834 78.887 3 0.04686 91090 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 23.881 13.542 53650000 0 0 0 1843600 0 11230000 0 0 6841800 0 8807100 0 5509600 6807400 12611000 33830 2989 30916 284454;284455;284456;284457;284458;284459;284460 225146 225146 1 LWAEDSTEK Unmodified 1077.4979 0.49785453 232 O14974 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 30.42 30.615 2 0.0036563 33210 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 89.355 76.318 73220000 0 0 0 3925500 4828300 5814200 5087600 0 5733600 0 8569500 13057000 8813600 6656200 10735000 33831 232 30917 284461;284462;284463;284464;284465;284466;284467;284468;284469;284470 225147;225148;225149;225150;225151;225152;225153;225154;225155 225149 9 LWAPDSPNR Unmodified 1054.5196 0.51959303 5085 Q9Y263 PLAA Phospholipase A-2-activating protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 44.115 43.978 2 0.013807 49404 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 59.245 42.005 45407000 0 0 0 8261800 4352000 16294000 0 7540400 8958900 0 0 0 0 0 0 33832 5085 30918 284471;284472;284473;284474;284475;284476;284477 225156;225157;225158;225159 225156 4 LWAQMQIDK Oxidation (M) 1147.5696 0.56957969 4428 Q9H6Z4 RANBP3 Ran-binding protein 3 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 51.869 44.988 2 0.0098096 61295 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.161 54.087 55127000 21256000 33871000 0 0 0 0 0 0 0 0 0 0 0 0 0 33833 4428 30919 284478;284479 225160;225161 225161 5878 2 LWAQMQIDK Unmodified 1131.5747 0.57466507 4428 Q9H6Z4 RANBP3 Ran-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 71.493 65.554 2 0.032444 80821 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 65.252 47.867 108200000 98833000 0 9369800 0 0 0 0 0 0 0 0 0 0 0 0 33834 4428 30919 284480;284481 225162 225162 1 LWCTYHEK Unmodified 1135.5121 0.51206481 1013 P15121 AKR1B1 Aldose reductase yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 36.607 31.654 2 0.018072 44144 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.296 74.145 91339000 79637000 0 11701000 0 0 0 0 0 0 0 0 0 0 0 0 33835 1013 30920 284482;284483 225163;225164 225163 2 LWDEASTCAQK Unmodified 1307.5816 0.58160094 4943 Q9UJX2 CDC23 Cell division cycle protein 23 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 39.609 34.597 2 4.7941E-09 45225 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.38 86.136 33771000 0 33771000 0 0 0 0 0 0 0 0 0 0 0 0 0 33836 4943 30921 284484 225165;225166 225166 2 LWDHATMTEVK Unmodified 1329.6387 0.63872189 5167 Q9Y3F4 STRAP Serine-threonine kinase receptor-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 48.336 48.719 3 0.0055402 53660 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.252 42.298 194780000 0 0 0 0 0 23008000 0 0 10281000 18530000 36864000 31171000 0 0 74925000 33837 5167 30922 284485;284486;284487;284488;284489;284490 225167;225168;225169;225170 225168 3 LWDLENGK Unmodified 973.4869 0.48689592 4304 Q9GZS3 WDR61 WD repeat-containing protein 61;WD repeat-containing protein 61, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.685 55.814 2 0.01475 62960 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 69.984 44.986 170550000 0 0 0 6665200 6933400 8629300 6563400 12423000 6375900 13173000 15625000 28478000 15229000 16488000 33970000 33838 4304 30923 284491;284492;284493;284494;284495;284496;284497;284498;284499;284500;284501;284502 225171;225172;225173;225174;225175;225176;225177 225174 7 LWDLTTGTTTR Unmodified 1263.6459 0.64591575 1950 P63244 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 67.129 67.479 2 0.0061228 76656 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.348 41.686 22826000 0 0 0 0 0 0 0 6723400 0 0 0 0 0 0 16103000 33839 1950 30924 284503;284504 225178;225179 225178 2 LWDLVAGK Unmodified 900.5069 0.50690308 349 O43660 PLRG1 Pleiotropic regulator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.132 72.203 2 0.014742 83083 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 69.998 36.26 43308000 0 0 0 3154700 2945900 3519600 2385600 3737600 2141600 3963100 4266000 3965300 2271600 3711300 7245700 33840 349 30925 284505;284506;284507;284508;284509;284510;284511;284512;284513;284514;284515;284516 225180;225181;225182;225183;225184;225185;225186;225187;225188 225181 9 LWDPRTPCNAGTFSQPEK Unmodified 2102.9844 0.9843733 355 O43684 BUB3 Mitotic checkpoint protein BUB3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 69.614 63.672 3 0.00014612 84076 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.764 54.642 272620000 233500000 23010000 16114000 0 0 0 0 0 0 0 0 0 0 0 0 33841 355 30926 284517;284518;284519 225189;225190;225191 225190 1 LWEEQLAAAK Unmodified 1157.6081 0.60807369 996 P14314 PRKCSH Glucosidase 2 subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 61.778 60.438 2 0.00049802 77194 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.04 71.318 3129600000 48600000 2488100000 64385000 19470000 19691000 13599000 23417000 29748000 16862000 29169000 79612000 70022000 34989000 54538000 137360000 33842 996 30927 284520;284521;284522;284523;284524;284525;284526;284527;284528;284529;284530;284531;284532;284533;284534;284535 225192;225193;225194;225195;225196;225197;225198;225199;225200;225201;225202;225203;225204;225205;225206;225207;225208;225209 225196 18 LWEISTGR Unmodified 960.50288 0.50288033 2111 Q05048 CSTF1 Cleavage stimulation factor subunit 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 58.633 58.832 2 0.028761 66507 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 56.547 30.394 19281000 0 0 0 1789400 0 0 0 0 0 2371400 3232500 2698600 0 2441100 6748100 33843 2111 30928 284536;284537;284538;284539;284540;284541 225210;225211;225212 225212 3 LWERLPQETR Unmodified 1326.7044 0.70443369 3431 Q8NEX9 SDR9C7 Short-chain dehydrogenase/reductase family 9C member 7 yes yes 0 0 1 By MS/MS 10 0 1 1 50.762 50.131 3 0.0019937 57427 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 67.726 39.713 8759700 0 0 0 8759700 0 0 0 0 0 0 0 0 0 0 0 33844 3431 30929 284542 225213;225214 225214 2 LWGDRYFDPANGK Unmodified 1537.7314 0.73137672 980 P13639 EEF2 Elongation factor 2 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 2 1 1 1 1 1 1 1 69.727 68.876 3 0.0012389 77894 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.419 41.312 195850000 36044000 0 0 4000800 0 9746900 0 5981300 4972000 0 0 0 7137900 14574000 113400000 33845 980 30930 284543;284544;284545;284546;284547;284548;284549;284550;284551 225215;225216;225217 225215 3 LWGLEAQK Unmodified 943.51272 0.51271674 4838 Q9UBE0 SAE1 SUMO-activating enzyme subunit 1;SUMO-activating enzyme subunit 1, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 65.992 60.002 2 0.043789 80475 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 102.77 70.838 48128000 24468000 12849000 10811000 0 0 0 0 0 0 0 0 0 0 0 0 33846 4838 30931 284552;284553;284554 225218 225218 0 LWGVIDVK Unmodified 928.5382 0.53820321 4896 Q9UHD1 CHORDC1 Cysteine and histidine-rich domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 78.452 77.873 2 0.0192 99429 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.323 61.214 335130000 253110000 0 0 0 2989800 7954600 3582800 4219900 2325400 7484200 6836200 8131500 4791200 9699700 24008000 33847 4896 30932 284555;284556;284557;284558;284559;284560;284561;284562;284563;284564;284565;284566 225219;225220;225221;225222;225223;225224;225225;225226;225227 225224 9 LWISVAR Unmodified 843.49667 0.49667274 2481 Q15029 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 68.2 68.287 2 0.023412 78366 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 86.512 49.925 73796000 0 0 0 2075000 3555500 0 0 4508200 4872300 7631000 7425400 9695900 7000200 7325800 19706000 33848 2481 30933 284567;284568;284569;284570;284571;284572;284573;284574;284575;284576 225228;225229;225230;225231;225232 225228 5 LWLLDDSK Unmodified 988.52295 0.52294707 1035 P16333;O43639 NCK1;NCK2 Cytoplasmic protein NCK1;Cytoplasmic protein NCK2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 78.937 78.973 2 0.021457 91324 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 61.962 43.638 22800000 0 0 0 1814400 0 2420800 2578300 2986700 0 5116800 7883100 0 0 0 0 33849 1035 30934 284577;284578;284579;284580;284581;284582 225233;225234;225235 225235 3 LWMAAMK Oxidation (M) 865.41902 0.41901605 1984 P78417 GSTO1 Glutathione S-transferase omega-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 49.969 43.607 1;2 0.010828 59317 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.03 57.927 161610000 112240000 31190000 18184000 0 0 0 0 0 0 0 0 0 0 0 0 33850 1984 30935 284583;284584;284585;284586 225236;225237 225237 3206 1 LWMAAMK 2 Oxidation (M) 881.41393 0.41393067 1984 P78417 GSTO1 Glutathione S-transferase omega-1 yes yes 0 2 0 By MS/MS 2 0 1 1 31.26 25.542 2 0.040373 36912 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.72 57.165 45092000 45092000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33851 1984 30935 284587 225238 225238 3206 0 LWNEELK Unmodified 930.48108 0.48108226 214 O14777 NDC80 Kinetochore protein NDC80 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 55.479 49.664 2 0.024805 64151 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.69 55.027 45821000 0 45821000 0 0 0 0 0 0 0 0 0 0 0 0 0 33852 214 30936 284588 225239 225239 1 LWNEVLASLK Unmodified 1171.6601 0.66010926 4002 Q96T88 UHRF1 E3 ubiquitin-protein ligase UHRF1 yes yes 0 0 0 By MS/MS 2 0 1 1 92.359 84.228 2 0.025945 109149 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.828 12.073 12233000 12233000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33853 4002 30937 284589 225240 225240 1 LWNTLGVCK Unmodified 1089.5641 0.56410038 1950 P63244 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 69.887 63.937 2 0.0054916 85138 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 159.04 122.02 400320000 260920000 106740000 32662000 0 0 0 0 0 0 0 0 0 0 0 0 33854 1950 30938 284590;284591;284592 225241;225242;225243 225242 2 LWPSGDR Unmodified 829.40825 0.40825167 1135 P22234 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.399 34.582 2 0.02342 37120 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.086 72.415 239580000 0 0 0 7334000 5047300 10069000 7106500 8511000 5891600 14334000 37178000 31732000 11692000 22412000 78269000 33855 1135 30939 284593;284594;284595;284596;284597;284598;284599;284600;284601;284602;284603;284604 225244 225244 1 LWPSGDRSQQK Unmodified 1300.6524 0.65239812 1135 P22234 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 23.308 23.561 3 0.0036755 23495 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.302 35.034 74964000 0 0 0 2625500 0 3207900 3974500 4495200 3065800 4250800 8710300 10290000 4962100 5901500 23480000 33856 1135 30940 284605;284606;284607;284608;284609;284610;284611;284612;284613;284614;284615 225245;225246;225247;225248;225249;225250;225251 225246 7 LWQTPLHVAAANR Unmodified 1475.7997 0.79973106 3386 Q8NB46 ANKRD52 Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 64.608 64.848 3 0.034508 74286 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 30.336 22.47 23850000 0 0 0 0 0 3738600 1470100 1682300 0 0 0 4973600 2847200 0 9138600 33857 3386 30941 284616;284617;284618;284619;284620;284621 225252 225252 1 LWQTVVGK Unmodified 929.53345 0.53345218 5167 Q9Y3F4 STRAP Serine-threonine kinase receptor-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 51.819 52.196 2 0.010604 58100 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 79.116 30.874 167180000 0 0 0 0 0 12070000 0 0 0 11143000 29797000 32765000 0 19246000 62158000 33858 5167 30942 284622;284623;284624;284625;284626;284627 225253;225254;225255;225256;225257;225258 225257 6 LWRSVTVDSMDEEK Unmodified 1693.7981 0.79813565 1242 P29084 GTF2E2 Transcription initiation factor IIE subunit beta yes yes 0 0 1 By MS/MS 2 0 1 1 67.104 58.809 3 0.00043624 78915 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.632 69.37 19472000 19472000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33859 1242 30943 284628 225259;225260 225260 2 LWSPDEEVSPEVLAK Unmodified 1697.8512 0.85121708 2647 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 81.351 80.65 2 3.6379E-08 93590 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 99.215 79.454 1000500000 0 854080000 5102000 4543900 8250700 14259000 8699300 10380000 8108900 15955000 13168000 15306000 0 14165000 28455000 33860 2647 30944 284629;284630;284631;284632;284633;284634;284635;284636;284637;284638;284639;284640;284641;284642 225261;225262;225263;225264;225265;225266;225267;225268;225269;225270;225271;225272;225273;225274;225275 225263 13 LWSVDHGEQSVVTAP Unmodified 1623.7893 0.78928553 2572 Q15750 TAB1 TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 72.211 72.614 2 0.0068036 83019 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.616 16.629 5987400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5987400 33861 2572 30945 284643 225276 225276 1 LWTGGLDNTVR Unmodified 1230.6357 0.63568542 2104;2103;2105 Q04725;Q04724;Q04726;Q04727 TLE2;TLE1;TLE3;TLE4 Transducin-like enhancer protein 2;Transducin-like enhancer protein 1;Transducin-like enhancer protein 3;Transducin-like enhancer protein 4 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 63.772 64.047 2 0.00047061 73045 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 84.213 40.966 192140000 0 0 0 0 0 0 0 18190000 17671000 17768000 19281000 28695000 25670000 18940000 45926000 33862 2103;2104;2105 30946 284644;284645;284646;284647;284648;284649;284650;284651 225277;225278;225279;225280;225281;225282;225283;225284;225285;225286;225287;225288 225287 12 LWTLVSEQTR Unmodified 1231.6561 0.65608651 1507 P46776 RPL27A 60S ribosomal protein L27a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.491 71.563 2 0.0041248 81333 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.985 14.74 460970000 0 0 0 19860000 20870000 37878000 24985000 30872000 30461000 41037000 44097000 64678000 41201000 37943000 67087000 33863 1507 30947 284652;284653;284654;284655;284656;284657;284658;284659;284660;284661;284662;284663 225289;225290;225291;225292;225293;225294 225289 3 LWTMHNAQDLQK Unmodified 1483.7242 0.72418285 1106 P20585 MSH3 DNA mismatch repair protein Msh3 yes yes 0 0 0 By MS/MS 2 0 1 1 61.221 52.98 3 0.013751 71706 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.357 32.731 20869000 20869000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33864 1106 30948 284664 225295 225295 1 LWTMHNAQDLQK Oxidation (M) 1499.7191 0.71909747 1106 P20585 MSH3 DNA mismatch repair protein Msh3 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 41.597 36.426 3 0.018561 50507 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.568 36.925 32384000 29003000 0 3381300 0 0 0 0 0 0 0 0 0 0 0 0 33865 1106 30948 284665;284666 225296 225296 1592 0 LWVPDEEVSPETMVK Oxidation (M) 1773.8495 0.84950252 4633 Q9NTI5 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 79.491 75.449 2 0.00057434 93803 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.979 66.103 39832000 0 39832000 0 0 0 0 0 0 0 0 0 0 0 0 0 33866 4633 30949 284667;284668 225297 225297 6030 1 LWVSSLEK Unmodified 960.52803 0.52803245 1055 P17544 ATF7 Cyclic AMP-dependent transcription factor ATF-7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65.021 64.1 2 0.010673 86196 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 111.82 65.445 251090000 85984000 28185000 0 5173900 7086900 11217000 9224800 10014000 8334300 16081000 12680000 16252000 12026000 10354000 18476000 33867 1055 30950 284669;284670;284671;284672;284673;284674;284675;284676;284677;284678;284679;284680;284681;284682 225298;225299;225300;225301;225302;225303;225304 225301 7 LYADSDSGDDSDK Unmodified 1386.5423 0.54229812 378 O43896 KIF1C Kinesin-like protein KIF1C yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 13.967 14.159 2 0.0023232 13205 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 70.977 70.977 17080000 0 0 0 0 1300400 1361700 1536600 0 1064900 1556500 3021400 2088600 1587800 1264100 2298200 33868 378 30951 284683;284684;284685;284686;284687;284688;284689;284690;284691;284692 225305;225306 225305 2 LYAEHSLLDLP Unmodified 1269.6605 0.66050319 2790 Q5TA50 CPTP Ceramide-1-phosphate transfer protein yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 88.823 85.158 2 0.00054667 102705 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 98.997 85.001 26028000 0 16170000 9858100 0 0 0 0 0 0 0 0 0 0 0 0 33869 2790 30952 284693;284694 225307 225307 1 LYAGSTVK Unmodified 837.45962 0.45961853 2641 Q16881 TXNRD1 Thioredoxin reductase 1, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 18.683 19.238 2 0.045087 19128 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 83.753 18.08 46559000 0 0 0 0 0 0 0 0 0 0 25931000 20628000 0 0 0 33870 2641 30953 284695;284696 225308 225308 0 LYALGLVPTR Unmodified 1101.6546 0.65462995 4658 Q9NV31 IMP3 U3 small nucleolar ribonucleoprotein protein IMP3 yes yes 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 79.631 79.72 2 0.0019707 91785 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.308 52.5 17324000 0 0 0 0 1527000 1910800 1048700 1264000 0 1967900 1529400 0 2357600 1873800 3844900 33871 4658 30954 284697;284698;284699;284700;284701;284702;284703;284704;284705 225309;225310 225309 2 LYAMQTGMK Unmodified 1041.4987 0.49872293 4540 Q9NP79 VTA1 Vacuolar protein sorting-associated protein VTA1 homolog yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 42.322 42.576 2 0.0061887 46367 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.738 56.933 28889000 0 0 0 0 0 4269100 1822600 2242600 917720 3581400 4499100 0 0 0 11557000 33872 4540 30955 284706;284707;284708;284709;284710;284711;284712 225311 225311 1 LYANMFER Oxidation (M) 1058.4855 0.48551571 2080 Q02790 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.49 41.668 2 0.0088129 46688 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 72.485 66.542 276090000 0 0 0 12844000 8129500 18711000 23440000 13558000 15399000 18782000 32666000 39953000 21658000 23700000 47243000 33873 2080 30956 284713;284714;284715;284716;284717;284718;284719;284720;284721;284722;284723;284724 225312;225313;225314;225315;225316 225312 3386 5 LYANMFER Unmodified 1042.4906 0.49060109 2080 Q02790 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 62.229 61.625 2 0.0043249 70383 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 111.82 75.63 822260000 89589000 0 0 18366000 15042000 52892000 27477000 0 25960000 54686000 83774000 114930000 28421000 63268000 247860000 33874 2080 30956 284725;284726;284727;284728;284729;284730;284731;284732;284733;284734;284735;284736;284737 225317;225318;225319;225320;225321;225322;225323;225324;225325;225326;225327;225328;225329 225317 12 LYANMFERLAEEENK Oxidation (M) 1871.8724 0.87236323 2080 Q02790 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 1 3 1 75.221 70.568 2;3 4.8163E-64 90797 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 191.06 172.79 173970000 49707000 92667000 31596000 0 0 0 0 0 0 0 0 0 0 0 0 33875 2080 30957 284738;284739;284740;284741;284742 225330;225331;225332;225333;225334 225332 3386 5 LYANMFERLAEEENK Unmodified 1855.8774 0.87744861 2080 Q02790 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS 2.4 0.49 3 2 3 2 85.536 80.536 2;3 1.9212E-07 102158 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.856 66.112 141190000 112050000 29141000 0 0 0 0 0 0 0 0 0 0 0 0 0 33876 2080 30957 284743;284744;284745;284746;284747 225335;225336;225337;225338 225335 4 LYAPPFILAPVK Unmodified 1327.7904 0.79039515 4909 Q9UHV7 MED13 Mediator of RNA polymerase II transcription subunit 13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 91.446 91.548 2 0.001032 106093 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.223 47.068 7492200 0 0 0 0 0 938680 0 0 0 1301700 0 1417100 0 925430 2909300 33877 4909 30958 284748;284749;284750;284751;284752;284753 225339;225340;225341;225342;225343 225342 5 LYARDHEDYDPQTVR Unmodified 1876.8704 0.8703894 3701 Q93008 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 0 0 1 By MS/MS 10 0 1 1 32.552 33.268 3 0.00063089 35385 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.549 55.219 10475000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10475000 33878 3701 30959 284754 225344 225344 1 LYASHSQFIK Unmodified 1192.6241 0.6240581 4206 Q9BW91 NUDT9 ADP-ribose pyrophosphatase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 5 2 1 2 44.133 38.805 2;3 9.6071E-05 53082 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 150.35 82.127 320300000 247130000 24668000 48502000 0 0 0 0 0 0 0 0 0 0 0 0 33879 4206 30960 284755;284756;284757;284758;284759 225345;225346;225347;225348;225349 225348 3 LYASILQQK Unmodified 1062.6073 0.6073454 193 O14617 AP3D1 AP-3 complex subunit delta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 60.417 58.957 2 0.0036305 66223 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 110.12 61.612 269680000 81558000 45239000 5512600 7378300 7349100 12619000 10802000 12265000 9443800 12984000 13845000 0 12516000 13320000 24853000 33880 193 30961 284760;284761;284762;284763;284764;284765;284766;284767;284768;284769;284770;284771;284772;284773;284774;284775 225350;225351;225352;225353;225354;225355;225356;225357;225358;225359;225360;225361;225362;225363 225361 11 LYASLGANDEDIRK Unmodified 1563.7893 0.78928553 3220 Q8IUR7 ARMC8 Armadillo repeat-containing protein 8 yes yes 0 0 1 By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 47.563 47.81 3 0.00023405 53877 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 64.104 56.733 62724000 0 0 0 0 2571100 6897700 3607900 0 4515200 0 7058000 8065500 7136800 7664600 15207000 33881 3220 30962 284776;284777;284778;284779;284780;284781;284782;284783;284784;284785 225364;225365;225366;225367;225368 225364 5 LYASLGANDEDIRKK Unmodified 1691.8842 0.88424855 3220 Q8IUR7 ARMC8 Armadillo repeat-containing protein 8 yes yes 0 0 2 By MS/MS 2 0 1 1 49.181 41.356 3 0.0044355 57351 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.83 48.097 8001100 8001100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33882 3220 30963 284786 225369 225369 1 LYASYEK Unmodified 872.42798 0.42798405 1171 P23921 RRM1 Ribonucleoside-diphosphate reductase large subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 7 3.87 3 5 1 1 1 1 1 1 1 1 24.912 23.557 2 0.025177 25477 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 81.297 36.686 2578800000 128060000 1840500000 42351000 0 0 77193000 0 0 0 87698000 112750000 116330000 0 0 173890000 33883 1171 30964 284787;284788;284789;284790;284791;284792;284793;284794 225370;225371;225372;225373;225374;225375 225370 6 LYATMEK Unmodified 854.42079 0.42079019 3662;2171 Q09472;Q92793 EP300;CREBBP Histone acetyltransferase p300;CREB-binding protein no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 25.812 25.971 2 0.031266 27371 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 73.975 36.946 155470000 0 0 0 6763000 9928700 11811000 11074000 14077000 11958000 13777000 22058000 20295000 12404000 21319000 0 33884 2171;3662 30965 284795;284796;284797;284798;284799;284800;284801;284802;284803;284804;284805 225376;225377 225376 2 LYAVHQEGNK Unmodified 1157.5829 0.58292157 1641 P50990 CCT8 T-complex protein 1 subunit theta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.8 3.49 7 3 25 4 4 2 2 2 2 3 2 2 2 2 2 2 2 2 15.807 14.973 2;3 5.6102E-11 22521 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 180.44 115.19 15669000000 4421400000 2859600000 3247700000 222560000 137320000 460850000 272940000 226690000 233670000 515700000 588780000 576000000 438380000 487720000 980090000 33885 1641 30966 284806;284807;284808;284809;284810;284811;284812;284813;284814;284815;284816;284817;284818;284819;284820;284821;284822;284823;284824;284825;284826;284827;284828;284829;284830;284831;284832;284833;284834;284835;284836;284837;284838;284839;284840 225378;225379;225380;225381;225382;225383;225384;225385;225386;225387;225388;225389;225390;225391;225392;225393;225394;225395;225396;225397;225398;225399;225400;225401;225402;225403;225404;225405;225406;225407;225408;225409;225410;225411;225412;225413;225414;225415;225416;225417 225396 33 LYCANGHTFQAK Unmodified 1408.6558 0.65576893 1443 P41743 PRKCI Protein kinase C iota type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 36.57 31.652 3 8.1728E-14 44142 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 121.02 110.1 256420000 204890000 22356000 29167000 0 0 0 0 0 0 0 0 0 0 0 0 33886 1443 30967 284841;284842;284843 225418;225419;225420;225421;225422;225423 225421 6 LYCNVDSNK Unmodified 1111.4968 0.49680868 2062 Q01780 EXOSC10 Exosome component 10 yes yes 0 0 0 By MS/MS 2 0 1 1 21.717 17.834 2 0.041336 23613 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.118 30.311 14335000 0 14335000 0 0 0 0 0 0 0 0 0 0 0 0 0 33887 2062 30968 284844 225424 225424 1 LYCPVEFSK Unmodified 1141.5478 0.54778161 1701 P52788 SMS Spermine synthase yes yes 0 0 0 By MS/MS 10 0 1 1 59.72 60.306 2 0.0062048 68017 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.696 53.171 20627000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20627000 33888 1701 30969 284845 225425 225425 1 LYCQELK Unmodified 952.4688 0.46880301 4195 Q9BVP2 GNL3 Guanine nucleotide-binding protein-like 3 yes yes 0 0 0 By MS/MS 2 0 1 1 34.096 29.452 2 0.031432 38424 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.369 54.477 36778000 0 36778000 0 0 0 0 0 0 0 0 0 0 0 0 0 33889 4195 30970 284846 225426 225426 1 LYDAYELK Unmodified 1013.507 0.50696266 873 P08758 ANXA5 Annexin A5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 52.879 52.181 2 0.030197 59206 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 55.676 16.884 686650000 0 115420000 3102700 16488000 7102900 16628000 12233000 11780000 9501600 0 115240000 72570000 0 62525000 244050000 33890 873 30971 284847;284848;284849;284850;284851;284852;284853;284854;284855;284856;284857;284858 225427;225428;225429;225430;225431;225432;225433 225427 7 LYDDIDFDIEEFAK Unmodified 1731.7879 0.78794812 3910 Q96KP4 CNDP2 Cytosolic non-specific dipeptidase yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 2 2 2 2 95.994 91.066 2;3 1.1032E-15 113869 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 143.97 117.27 61952000 8531400 53420000 0 0 0 0 0 0 0 0 0 0 0 0 0 33891 3910 30972 284859;284860;284861;284862 225434;225435;225436;225437 225434 4 LYDEGDPSEK Unmodified 1151.4982 0.49824846 3966 Q96RE7 NACC1 Nucleus accumbens-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.883 20.086 2 0.016562 20186 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 61.691 57.335 217420000 0 0 0 10091000 15056000 20734000 15716000 17969000 14579000 22000000 22366000 21785000 17896000 15402000 23826000 33892 3966 30973 284863;284864;284865;284866;284867;284868;284869;284870;284871;284872;284873;284874 225438;225439;225440;225441;225442;225443;225444;225445;225446;225447;225448 225442 7 LYDFYLFK Unmodified 1107.5641 0.56408361 2656 Q2TAL8 QRICH1 Glutamine-rich protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 88.619 87.406 2 0.010604 101424 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.116 37.614 23145000 11012000 0 0 0 0 0 0 1057000 1404200 0 1842800 0 0 1358800 6470000 33893 2656 30974 284875;284876;284877;284878;284879;284880 225449;225450 225449 2 LYDIDVAK Unmodified 935.4964 0.49639797 1908 P62750 RPL23A 60S ribosomal protein L23a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53.872 52.989 2 0.011282 60406 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 77.282 35.39 2591500000 42789000 389000000 0 114090000 116850000 169180000 155590000 137990000 145630000 259030000 221370000 210350000 225720000 181050000 222820000 33894 1908 30975 284881;284882;284883;284884;284885;284886;284887;284888;284889;284890;284891;284892;284893;284894 225451;225452;225453;225454;225455;225456;225457;225458;225459;225460 225452 9 LYDILGVPPGASENELK Unmodified 1813.9462 0.9461801 440 O60884 DNAJA2 DnaJ homolog subfamily A member 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.39 3.7 5 1 12 1 4 1 2 1 1 1 1 1 1 1 1 1 1 85.609 84.21 2;3 2.3818E-07 97537 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 84.289 62.732 533750000 8064900 405920000 4524000 0 8189800 8971000 5241100 7094200 7054100 12918000 10715000 12626000 7787200 9979700 24666000 33895 440 30976 284895;284896;284897;284898;284899;284900;284901;284902;284903;284904;284905;284906;284907;284908;284909;284910;284911;284912 225461;225462;225463;225464;225465;225466;225467;225468;225469;225470;225471;225472;225473;225474;225475;225476;225477;225478;225479;225480;225481;225482;225483;225484;225485;225486 225484 25 LYDLDNDGYITR Unmodified 1456.6834 0.68342347 1874 P62166 NCS1 Neuronal calcium sensor 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 67.198 67.388 2 0.011767 77421 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 63.283 44.972 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33896 1874 30977 284913;284914 225487;225488 225487 2 LYDMADVWVK Oxidation (M) 1254.5955 0.59546009 3733 Q96A65 EXOC4 Exocyst complex component 4 yes yes 0 1 0 By MS/MS 2 0 1 1 73.365 67.82 2 0.018457 85779 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.568 44.331 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33897 3733 30978 284915 225489 225489 5303 1 LYDNLLEQNLIR Unmodified 1502.8093 0.80929269 129 O00231 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 84.646 84.695 2 3.6796E-08 98220 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 151.22 94.3 145500000 0 0 0 0 11967000 25944000 0 0 0 35531000 32458000 39601000 0 0 0 33898 129 30979 284916;284917;284918;284919;284920 225490;225491;225492;225493 225491 4 LYDNPLTNESK Unmodified 1292.6248 0.62484596 2895 Q6N069 NAA16 N-alpha-acetyltransferase 16, NatA auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 49.465 49.535 2 1.0314E-36 55859 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 179.8 145 1447900000 0 0 0 37328000 79201000 83092000 97089000 123510000 102430000 204700000 336520000 384070000 0 0 0 33899 2895 30980 284921;284922;284923;284924;284925;284926;284927;284928;284929 225494;225495;225496;225497;225498;225499;225500;225501;225502;225503;225504;225505;225506;225507 225498 14 LYDPGQEYSEFVK Unmodified 1573.73 0.73003931 2695 Q52LW3 ARHGAP29 Rho GTPase-activating protein 29 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 76.177 75.08 2 0.0007138 86882 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 72.006 57.587 33621000 0 23812000 0 0 0 3534700 0 3369900 2904300 0 0 0 0 0 0 33900 2695 30981 284930;284931;284932;284933;284934;284935 225508;225509;225510;225511;225512;225513;225514 225513 7 LYDPLLEYRR Unmodified 1336.7139 0.71393574 2327 Q13614 MTMR2 Myotubularin-related protein 2 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 72.092 72.277 3 0.0084126 82555 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.08 33.715 28221000 0 0 0 0 0 4995500 1230100 0 2803300 2981500 1783500 3937300 2378600 0 8111300 33901 2327 30982 284936;284937;284938;284939;284940;284941;284942;284943 225515 225515 1 LYDVETK Unmodified 866.43855 0.43854874 2932 Q6P3W7 SCYL2 SCY1-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 27.474 27.455 2 0.023725 29299 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 84.244 37.873 69213000 0 0 0 8563000 9287200 0 14533000 17946000 0 0 0 0 18884000 0 0 33902 2932 30983 284944;284945;284946;284947;284948 225516 225516 1 LYDVPANSMR Oxidation (M) 1180.5547 0.55465791 355 O43684 BUB3 Mitotic checkpoint protein BUB3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 35.456 35.765 2 0.0010803 38251 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 104.2 66.067 488660000 0 0 0 0 0 30584000 48292000 40637000 33584000 47545000 68340000 44562000 53440000 52083000 69594000 33903 355 30984 284949;284950;284951;284952;284953;284954;284955;284956;284957;284958 225517;225518;225519;225520;225521;225522;225523;225524;225525;225526;225527 225521 443 11 LYDVPANSMR Unmodified 1164.5597 0.55974328 355 O43684 BUB3 Mitotic checkpoint protein BUB3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.378 48.54 2 0.0009285 54667 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 112.84 103.25 862410000 0 0 0 29510000 37406000 34987000 61989000 78995000 32951000 74935000 102710000 51933000 48664000 85507000 222830000 33904 355 30984 284959;284960;284961;284962;284963;284964;284965;284966;284967;284968;284969;284970 225528;225529;225530;225531;225532;225533;225534;225535;225536;225537;225538 225532 11 LYDVVAVFPK Unmodified 1149.6434 0.64339656 1976 P78346 RPP30 Ribonuclease P protein subunit p30 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.768 82.831 2 0.0014119 95423 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.318 72.878 82072000 0 0 0 2736500 3806000 5830700 3141100 4203200 2743800 6647400 5703300 7404800 8932900 9427300 21495000 33905 1976 30985 284971;284972;284973;284974;284975;284976;284977;284978;284979;284980;284981;284982 225539;225540;225541;225542;225543;225544;225545;225546;225547;225548;225549;225550 225542 12 LYEAAVK Unmodified 792.43815 0.43815481 2465 Q14CX7 NAA25 N-alpha-acetyltransferase 25, NatB auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 24.165 24.437 2 0.043924 25621 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 67.035 12.51 1303000000 0 0 0 0 0 0 430070000 369330000 405970000 21488000 27835000 48323000 0 0 0 33906 2465 30986 284983;284984;284985;284986;284987;284988 225551;225552 225551 2 LYEALTPVH Unmodified 1041.5495 0.54949617 4963 Q9UKF6 CPSF3 Cleavage and polyadenylation specificity factor subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 2 1 1 1 1 1 1 1 57.591 57.764 2 0.0031512 65426 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 90.986 53.965 181710000 0 0 0 0 13434000 17883000 18900000 0 14019000 0 0 24168000 35622000 17481000 40200000 33907 4963 30987 284989;284990;284991;284992;284993;284994;284995;284996;284997;284998;284999;285000 225553;225554;225555;225556;225557;225558;225559;225560;225561;225562;225563 225556 11 LYEAMCEFHEAEK Unmodified 1655.696 0.69597877 2945 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 56.192 55.386 3 0.0038731 61619 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.809 26.009 101120000 0 15244000 2862200 0 0 0 0 0 9595900 7268000 8252900 18704000 10900000 7889900 20402000 33908 2945 30988 285001;285002;285003;285004;285005;285006;285007;285008;285009 225564;225565;225566;225567;225568;225569;225570;225571 225566 8 LYEAMCEFHEAEK Oxidation (M) 1671.6909 0.69089339 2945 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 39.48 40.087 3 0.00058567 44055 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.401 42.855 30499000 0 0 0 0 0 0 0 0 0 0 10514000 19985000 0 0 0 33909 2945 30988 285010;285011 225572;225573 225573 4581 2 LYEAYLPETFR Unmodified 1400.6976 0.69761697 3535 Q8WU79 SMAP2 Stromal membrane-associated protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 2 1 1 1 1 80.573 80.714 2 0.00028854 92929 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 103.7 75.687 18826000 0 0 0 0 0 3640000 0 1513000 1729300 4312000 0 0 0 0 7632200 33910 3535 30989 285012;285013;285014;285015;285016;285017 225574;225575;225576;225577 225575 4 LYEEDDLDRLEQMEDSEGTVR Oxidation (M) 2557.1126 0.11260609 3180 Q86W92 PPFIBP1 Liprin-beta-1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 70.669 70.92 3 2.8368E-21 81165 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.281 73.081 76364000 0 0 0 0 0 0 0 9265800 5205700 12195000 14662000 15408000 0 0 19627000 33911 3180 30990 285018;285019;285020;285021;285022;285023;285024 225578;225579;225580;225581;225582;225583;225584;225585 225580 4803 8 LYEEDDLDRLEQMEDSEGTVR Unmodified 2541.1177 0.11769147 3180 Q86W92 PPFIBP1 Liprin-beta-1 yes yes 0 0 1 By MS/MS 10 0 1 1 78.753 78.999 3 6.7639E-21 90890 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.063 70.76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33912 3180 30990 285025 225586 225586 1 LYEEEIR Unmodified 950.47091 0.4709115 81 CON__Q6NT21;CON__P78385;P78385;A6NCN2 KRT83;KRT87P Keratin, type II cuticular Hb3;Putative keratin-87 protein no no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 34.587 34.782 2 0.050331 38281 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 62.717 16.347 + 110370000 0 0 0 0 2009400 0 3224700 80363000 1738000 5200300 4725500 0 0 2924300 10184000 33913 81 30991 285026;285027;285028;285029;285030;285031;285032;285033 225587;225588 225587 2 LYEEGSNK Unmodified 938.43453 0.434526 1195 P25788 PSMA3 Proteasome subunit alpha type-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.42 3.66 3 1 8 1 2 1 1 1 1 1 1 1 1 1 8.7062 7.7509 2 0.0068442 5552 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 94.262 51.138 1893000000 58299000 1799200000 4673600 3520600 0 1155400 1610300 1641500 0 0 5688900 3779600 0 2165800 11221000 33914 1195 30992 285034;285035;285036;285037;285038;285039;285040;285041;285042;285043;285044;285045 225589;225590;225591;225592;225593;225594;225595;225596;225597;225598 225597 9 LYEEPLSK Unmodified 977.50696 0.50696266 2310 Q13535 ATR Serine/threonine-protein kinase ATR yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 36.879 36.938 2 0.023017 40845 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 60.682 36.483 4037300 0 0 0 0 0 0 4037300 0 0 0 0 0 0 0 0 33915 2310 30993 285046;285047 225599;225600 225599 2 LYELDGLR Unmodified 977.5182 0.51819605 5235 Q9Y5K5 UCHL5 Ubiquitin carboxyl-terminal hydrolase isozyme L5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 64.079 64.264 2 0.016731 73744 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 66.799 29.154 112280000 0 0 0 0 5866500 0 7384500 0 0 11766000 18211000 22833000 8331200 13568000 24320000 33916 5235 30994 285048;285049;285050;285051;285052;285053;285054;285055 225601;225602;225603;225604;225605 225604 5 LYELGGEPERK Unmodified 1289.6616 0.66156582 183 O14497 ARID1A AT-rich interactive domain-containing protein 1A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.42 3.66 3 1 8 1 1 2 1 1 1 1 1 1 1 1 37.92 36.498 2;3 0.031925 45951 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 45.077 35.026 176780000 41065000 10153000 59472000 6017300 4072400 0 7322900 0 0 7939700 6737100 11504000 8909100 0 13585000 33917 183 30995 285056;285057;285058;285059;285060;285061;285062;285063;285064;285065;285066;285067 225606;225607;225608;225609 225609 3 LYELIITR Unmodified 1019.6015 0.60153174 841 P07384 CAPN1 Calpain-1 catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.452 75.513 2 0.005566 87097 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 106.36 34.218 264420000 0 0 0 15814000 13165000 20276000 17320000 19789000 25445000 22856000 18692000 21764000 15093000 16971000 57240000 33918 841 30996 285068;285069;285070;285071;285072;285073;285074;285075;285076;285077;285078;285079 225610;225611;225612;225613;225614;225615;225616;225617;225618;225619;225620;225621 225612 12 LYEMVSYCQNISK Oxidation (M) 1649.7429 0.74292896 1496 P46063 RECQL ATP-dependent DNA helicase Q1 yes yes 0 1 0 By MS/MS 2 0 1 1 56.647 50.825 2 0.011622 65661 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.08 58.181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33919 1496 30997 285080 225622 225622 2363 1 LYENLGFVR Unmodified 1109.5869 0.58694431 2448 Q147X3 NAA30 N-alpha-acetyltransferase 30 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 72.052 72.045 2 0.0032381 82597 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 129.65 92.63 211880000 0 0 0 5291800 10715000 12679000 0 2221000 0 46203000 53745000 79384000 1642600 0 0 33920 2448 30998 285081;285082;285083;285084;285085;285086;285087;285088 225623;225624;225625;225626;225627;225628;225629 225627 7 LYENLGFVRDK Unmodified 1352.7089 0.70885036 2448 Q147X3 NAA30 N-alpha-acetyltransferase 30 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 60.946 60.96 3 0.00034526 69486 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 82.803 60.329 110180000 0 0 0 2410700 3254300 5495600 1854800 0 2257000 21523000 29889000 43496000 0 0 0 33921 2448 30999 285089;285090;285091;285092;285093;285094;285095;285096 225630;225631;225632;225633 225633 4 LYEPDQLQELK Unmodified 1374.7031 0.70309628 4762 Q9NZB2 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.002 68.082 2 0.00033061 78117 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 96.143 75.273 121340000 0 0 0 5104600 7772000 8745200 8148600 7676300 6598100 11013000 15771000 10858000 13417000 11522000 14714000 33922 4762 31000 285097;285098;285099;285100;285101;285102;285103;285104;285105;285106;285107;285108 225634;225635;225636;225637;225638;225639;225640;225641;225642;225643 225635 10 LYEQILAENEK Unmodified 1348.6874 0.68744622 232 O14974 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60.507 59.907 2 2.5397E-05 69275 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 140.16 78.165 169330000 0 38312000 1109000 5168300 9216500 10137000 11469000 8620500 6670000 13490000 14421000 12989000 12140000 11227000 14364000 33923 232 31001 285109;285110;285111;285112;285113;285114;285115;285116;285117;285118;285119;285120;285121;285122 225644;225645;225646;225647;225648;225649;225650;225651;225652;225653;225654;225655;225656;225657 225654 13 LYEQLSGK Unmodified 936.49165 0.49164694 1269 P30086 PEBP1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 7.56 3.64 1 2 2 11 3 1 1 2 1 1 1 1 2 1 1 1 35.915 35.198 2 0.0044044 32564 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 110.81 50.126 1452600000 379680000 243530000 128250000 37091000 0 0 8505400 8434600 6772600 13202000 137060000 125480000 12553000 0 352050000 33924 1269 31002 285123;285124;285125;285126;285127;285128;285129;285130;285131;285132;285133;285134;285135;285136;285137;285138 225658;225659;225660;225661;225662;225663;225664;225665;225666;225667;225668;225669 225668 10 LYEVAIDGKEEDLGSPTGELTSK Unmodified 2450.2064 0.20643013 3413 Q8ND04 SMG8 Protein SMG8 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 78.63 74.553 3 0.00061193 89736 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 52.321 48.726 43929000 0 43929000 0 0 0 0 0 0 0 0 0 0 0 0 0 33925 3413 31003 285139;285140 225670;225671 225671 2 LYFEELSLER Unmodified 1297.6554 0.65541781 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 82.568 82.621 2 0.0066827 95270 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.297 51.681 28599000 0 0 0 443760 765280 0 0 1870200 1409400 2532000 2683600 3428800 0 3852100 11614000 33926 1300 31004 285141;285142;285143;285144;285145;285146;285147;285148;285149;285150 225672;225673;225674;225675;225676 225674 5 LYFLPEDTPQGR Unmodified 1434.7143 0.71432967 2453 Q14865 ARID5B AT-rich interactive domain-containing protein 5B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.691 76.741 2 0.00073229 87759 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 75.294 62.338 52061000 0 0 0 1854400 2306100 3869000 4063200 4136900 0 5424100 4971300 7118600 5655200 4482600 8179600 33927 2453 31005 285151;285152;285153;285154;285155;285156;285157;285158;285159;285160;285161 225677;225678;225679;225680;225681;225682;225683;225684 225679 8 LYGADGLVFGALTEDGHIDK Unmodified 2090.032 0.032034995 4637 Q9NTM9 CUTC Copper homeostasis protein cutC homolog yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 92.689 87.276 3 0.0013643 110241 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 46.356 32.625 85818000 34783000 51035000 0 0 0 0 0 0 0 0 0 0 0 0 0 33928 4637 31006 285162;285163;285164 225685;225686;225687 225685 2 LYGAQFHPEVGLTENGK Unmodified 1858.9214 0.92136233 1612 P49915 GMPS GMP synthase [glutamine-hydrolyzing] yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.29 3.67 4 2 11 3 2 1 1 1 1 1 1 1 1 1 1 1 1 69.324 67.825 3 1.4016E-71 89115 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 144.15 134.59 4421400000 2562000000 1199700000 352070000 8589300 5958700 46321000 0 16226000 12957000 29703000 27981000 29280000 16458000 28123000 86099000 33929 1612 31007 285165;285166;285167;285168;285169;285170;285171;285172;285173;285174;285175;285176;285177;285178;285179;285180;285181 225688;225689;225690;225691;225692;225693;225694;225695;225696;225697;225698;225699;225700;225701;225702;225703;225704;225705;225706 225696 19 LYGDADYLEER Unmodified 1342.6041 0.60411052 1061 P17812 CTPS1 CTP synthase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 2 1 1 1 1 1 1 58.045 58.16 2 0.00043854 66107 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 96.89 77.619 158350000 0 0 0 10413000 11339000 12723000 11789000 9674400 3860000 9947100 17303000 15857000 12854000 17102000 25492000 33930 1061 31008 285182;285183;285184;285185;285186;285187;285188;285189;285190;285191;285192;285193;285194 225707;225708;225709;225710;225711;225712;225713;225714;225715;225716;225717;225718;225719 225707 13 LYGDVPFIEER Unmodified 1336.6663 0.66631685 4598 Q9NRF8 CTPS2 CTP synthase 2 yes yes 0 0 0 By MS/MS 10 0 1 1 79.504 79.734 2 0.0049936 91791 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.652 43.781 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33931 4598 31009 285195 225720 225720 1 LYGEFADPFK Unmodified 1185.5706 0.57062555 533 O75694 NUP155 Nuclear pore complex protein Nup155 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 80.278 79.16 2 0.0067887 90830 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 64.04 42.577 785280000 29157000 335900000 49850000 22266000 20154000 34164000 19090000 27047000 17509000 46568000 26344000 50862000 34232000 30292000 41841000 33932 533 31010 285196;285197;285198;285199;285200;285201;285202;285203;285204;285205;285206;285207;285208;285209;285210;285211 225721;225722;225723;225724;225725;225726;225727;225728;225729;225730;225731;225732;225733;225734;225735;225736 225731 16 LYGLGTGVAQK Unmodified 1105.6132 0.61315906 4877 Q9UFF9 CNOT8 CCR4-NOT transcription complex subunit 8 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 52.844 52.255 2 0.016043 59923 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 66.27 23.147 18846000 0 0 0 8301600 10544000 0 0 0 0 0 0 0 0 0 0 33933 4877 31011 285212;285213 225737 225737 0 LYGNDFSQTTISR Unmodified 1500.7209 0.72087161 1007 P14859;Q9UKI9;P09086 POU2F1;POU2F3;POU2F2 POU domain, class 2, transcription factor 1;POU domain, class 2, transcription factor 3;POU domain, class 2, transcription factor 2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.191 56.317 2 1.8245E-26 63657 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 164.43 125.4 203560000 0 0 0 9349900 12517000 12556000 12840000 24415000 8832200 18440000 18221000 21718000 13405000 17138000 34132000 33934 1007 31012 285214;285215;285216;285217;285218;285219;285220;285221;285222;285223;285224;285225 225738;225739;225740;225741;225742;225743;225744;225745;225746;225747;225748 225746 11 LYGNPNTLR Unmodified 1046.5509 0.55089316 2583 Q15814 TBCC Tubulin-specific chaperone C yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.223 36.404 2 0.021923 40318 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.854 25.252 93943000 0 0 0 5099500 4451600 8611400 8250000 4751000 4078100 8869500 9940400 10057000 8928900 9353500 11552000 33935 2583 31013 285226;285227;285228;285229;285230;285231;285232;285233;285234;285235;285236;285237 225749;225750;225751;225752 225749 4 LYGPSSVSFADDFVR Unmodified 1658.794 0.79403655 1624 P50454 SERPINH1 Serpin H1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 84.592 84.658 2 1.0734E-26 97773 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 128.28 118.63 302900000 0 0 0 3026700 13851000 16697000 9463100 17205000 16121000 29354000 34835000 32413000 8762600 20773000 100400000 33936 1624 31014 285238;285239;285240;285241;285242;285243;285244;285245;285246;285247;285248;285249 225753;225754;225755;225756;225757;225758;225759;225760;225761;225762;225763;225764;225765;225766 225757 14 LYGPTNFAPIINHVAR Unmodified 1781.9577 0.95768826 4064 Q99829 CPNE1 Copine-1 yes yes 0 0 0 By MS/MS 10 0 1 1 82.356 82.559 3 0.00014849 95192 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.281 63.552 24066000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24066000 33937 4064 31015 285250 225767 225767 1 LYGPTNFSPIINHVAR Unmodified 1797.9526 0.95260288 458 O75131 CPNE3 Copine-3 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.648 79.751 3 4.3158E-08 91859 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.624 78.679 54313000 0 0 0 0 1545000 8039400 1625100 6311800 1906700 3311100 3384600 6297000 2064600 2373700 17454000 33938 458 31016 285251;285252;285253;285254;285255;285256;285257;285258;285259;285260;285261 225768;225769;225770;225771 225770 4 LYGSAGPPPTGEEDTAEK Unmodified 1817.8319 0.8319382 932 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.34 1 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 44.9 44.593 2 1.3085E-80 48607 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 206.18 194.92 476330000 66012000 93223000 0 12223000 9964800 34946000 14197000 12219000 21943000 28044000 33006000 48835000 24175000 25308000 52235000 33939 932 31017 285262;285263;285264;285265;285266;285267;285268;285269;285270;285271;285272;285273;285274;285275;285276 225772;225773;225774;225775;225776;225777;225778;225779;225780;225781;225782;225783;225784;225785;225786 225775 15 LYGSAGPPPTGEEDTAEKDEL Unmodified 2174.9855 0.98553831 932 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.03 3.42 1 5 2 24 4 3 1 2 2 2 2 2 2 2 2 2 2 2 2 62.609 61.537 2;3 2.9902E-106 74980 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 222.75 200.28 2893400000 175570000 1450600000 2327100 69954000 82272000 67442000 81481000 68150000 55438000 102660000 141370000 178340000 103260000 110070000 204470000 33940 932 31018 285277;285278;285279;285280;285281;285282;285283;285284;285285;285286;285287;285288;285289;285290;285291;285292;285293;285294;285295;285296;285297;285298;285299;285300;285301;285302;285303;285304;285305;285306;285307;285308 225787;225788;225789;225790;225791;225792;225793;225794;225795;225796;225797;225798;225799;225800;225801;225802;225803;225804;225805;225806;225807;225808;225809;225810;225811;225812;225813 225790 25 LYGSGDQEAWQK Unmodified 1380.631 0.63099397 1240 P28838 LAP3 Cytosol aminopeptidase yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 44.909 40.3 2 2.1813E-13 52391 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 144.77 124.98 163880000 0 161820000 2060200 0 0 0 0 0 0 0 0 0 0 0 0 33941 1240 31019 285309;285310 225814;225815 225814 2 LYGTTTFK Unmodified 929.48583 0.48583328 5096 Q9Y2D4 EXOC6B Exocyst complex component 6B yes yes 0 0 0 By MS/MS 2 0 1 1 46.09 39.098 2 0.01658 53472 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 91.906 22.517 21255000 21255000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33942 5096 31020 285311 225816 225816 1 LYHDIAQQAFK Unmodified 1332.6826 0.68263561 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 48.97 49.335 3 0.00020705 54590 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.841 68.626 102060000 0 0 0 0 0 11277000 7930200 0 0 0 13434000 23664000 7578200 12311000 25869000 33943 2378 31021 285312;285313;285314;285315;285316;285317;285318;285319 225817;225818;225819;225820 225819 4 LYHGLELAK Unmodified 1042.5811 0.58113065 496 O75419 CDC45 Cell division control protein 45 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 57.111 48.93 2 0.026131 66859 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.905 1.912 50785000 50785000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33944 496 31022 285320 225821 225821 1 LYHNEVEIEK Unmodified 1272.635 0.63501672 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.94 3.51 1 6 1 23 3 3 2 1 2 2 2 2 2 2 2 2 2 2 2 36.642 35.818 2;3 7.938E-05 44348 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 159.34 104.35 1167300000 101670000 320500000 254950000 25688000 27254000 57944000 40149000 33829000 23243000 50176000 60509000 33268000 39655000 41251000 57179000 33945 2431 31023 285321;285322;285323;285324;285325;285326;285327;285328;285329;285330;285331;285332;285333;285334;285335;285336;285337;285338;285339;285340;285341;285342;285343;285344;285345;285346;285347;285348;285349;285350;285351 225822;225823;225824;225825;225826;225827;225828;225829;225830;225831;225832;225833;225834;225835;225836;225837;225838;225839;225840;225841;225842;225843;225844;225845;225846;225847 225827 16 LYIDSYEK Unmodified 1029.5019 0.50187728 1380 P36871 PGM1 Phosphoglucomutase-1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 47.234 47.523 2 0.014414 53252 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 70.525 55.026 73161000 0 0 0 1515900 0 0 0 0 0 2457600 15412000 17935000 0 8075400 27766000 33946 1380 31024 285352;285353;285354;285355;285356;285357 225848;225849;225850 225849 3 LYIGNLNESVTPADLEK Unmodified 1874.9626 0.96255845 4768 Q9NZI8 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 82.509 81.92 2 2.3425E-18 94696 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 115.14 97.769 152680000 0 115930000 0 0 1950300 2251300 1730500 0 2381100 5285000 3805800 6178800 2119700 4522600 6519300 33947 4768 31025 285358;285359;285360;285361;285362;285363;285364;285365;285366;285367;285368;285369 225851;225852;225853;225854;225855;225856;225857;225858;225859;225860;225861 225853 11 LYILGGEVAESAQK Unmodified 1476.7824 0.78240924 3021 Q6ZW49 PAXIP1 PAX-interacting protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 73.095 73.28 2 0.021032 84394 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 48.741 34.805 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33948 3021 31026 285370 225862 225862 1 LYINHTPPPLSK Unmodified 1378.7609 0.76088593 3465 Q8NI27 THOC2 THO complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 53.033 51.796 2;3 0.0023846 58009 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 54.023 37.645 377360000 117220000 0 9779400 12012000 11744000 17421000 16727000 24720000 18967000 23707000 25336000 21276000 24876000 24632000 28939000 33949 3465 31027 285371;285372;285373;285374;285375;285376;285377;285378;285379;285380;285381;285382;285383;285384;285385 225863;225864;225865;225866;225867;225868;225869;225870;225871;225872;225873;225874;225875;225876 225872 12 LYISQLQK Unmodified 991.57023 0.57023162 2751 Q5PSV4 BRMS1L Breast cancer metastasis-suppressor 1-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 52.986 52.354 2 0.011082 58343 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 77.741 32.405 65427000 16929000 0 0 0 3546500 0 4759000 3889500 4268600 5945700 0 5336300 5975500 5466500 9310700 33950 2751 31028 285386;285387;285388;285389;285390;285391;285392;285393;285394;285395 225877;225878;225879;225880;225881;225882;225883;225884;225885;225886 225883 10 LYIVGGSDPYGQK Unmodified 1395.7034 0.70343063 5300 Q9Y6Y0 IVNS1ABP Influenza virus NS1A-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 6.12 3.89 3 1 4 1 2 1 1 1 1 1 63.351 60.491 2 0.0036808 69505 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 64.297 46.433 105350000 4120400 84808000 1871900 0 1906800 4736700 0 4130000 3774700 0 0 0 0 0 0 33951 5300 31029 285396;285397;285398;285399;285400;285401;285402;285403 225887;225888;225889;225890;225891;225892;225893 225892 6 LYKDDQLLDDGK Unmodified 1421.7038 0.70382456 2523 Q15370 TCEB2 Transcription elongation factor B polypeptide 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 7 1 1 1 1 1 1 1 42.915 42.976 3 0.022488 48562 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 34.593 27.222 125630000 0 0 0 13621000 13165000 0 19684000 0 8000300 15446000 0 32615000 23103000 0 0 33952 2523 31030 285404;285405;285406;285407;285408;285409;285410 225894 225894 1 LYKPEVQLR Unmodified 1144.6604 0.66044361 417 O60610 DIAPH1 Protein diaphanous homolog 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.699 46.865 3 0.0037713 52673 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.27 52.501 464940000 0 0 0 24902000 22715000 58098000 32587000 27529000 25258000 48809000 40479000 47132000 50727000 43390000 43310000 33953 417 31031 285411;285412;285413;285414;285415;285416;285417;285418;285419;285420;285421;285422 225895;225896;225897;225898;225899;225900;225901;225902;225903;225904 225895 10 LYLADPMK Oxidation (M) 965.4892 0.4892041 1576 P49458 SRP9 Signal recognition particle 9 kDa protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.12 3.26 3 3 18 2 3 1 1 2 2 2 1 2 1 1 1 2 1 2 44.848 43.556 2 0.010538 48247 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.981 48.204 797190000 14330000 396070000 11582000 19160000 32567000 38345000 20571000 19044000 36144000 23951000 22693000 35559000 52358000 18038000 56770000 33954 1576 31032 285423;285424;285425;285426;285427;285428;285429;285430;285431;285432;285433;285434;285435;285436;285437;285438;285439;285440;285441;285442;285443;285444;285445;285446 225905;225906;225907;225908;225909;225910;225911;225912;225913;225914;225915;225916;225917;225918;225919;225920 225912 2527 16 LYLADPMK Unmodified 949.49429 0.49428948 1576 P49458 SRP9 Signal recognition particle 9 kDa protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 63.104 62.741 2 0.0097801 72685 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 81.784 81.784 1452900000 0 1035200000 0 26555000 20521000 26723000 20877000 34366000 13247000 34453000 45975000 50022000 29244000 37651000 78141000 33955 1576 31032 285447;285448;285449;285450;285451;285452;285453;285454;285455;285456;285457;285458;285459 225921;225922;225923;225924;225925;225926;225927;225928;225929;225930;225931;225932;225933;225934 225933 14 LYLDELEGGGNPGASCK Unmodified 1778.8145 0.814514 4525 Q9HD26 GOPC Golgi-associated PDZ and coiled-coil motif-containing protein yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 2 70.071 70.22 2 0.00042457 80900 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 59.607 49.952 45650000 0 0 0 2086600 0 5209600 0 0 0 4585600 4038600 5010800 3591300 3663700 17464000 33956 4525 31033 285460;285461;285462;285463;285464;285465;285466;285467;285468 225935;225936;225937;225938;225939 225935 5 LYLDGSEK Unmodified 923.46001 0.46001246 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 32.025 31.341 2 0.012113 39337 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.33 47.618 207100000 0 142530000 0 3284100 6019500 7716100 6128500 3993200 6005400 6476400 0 11430000 6309500 7215600 0 33957 1601 31034 285469;285470;285471;285472;285473;285474;285475;285476;285477;285478;285479;285480;285481 225940;225941;225942;225943;225944;225945;225946 225941 7 LYLDPGLREK Unmodified 1202.6659 0.66592292 414 O60568 PLOD3 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 52.512 52.729 3 0.028857 61090 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 33.961 25.474 49384000 0 0 0 2489600 0 5170900 0 2759400 4655500 0 6066700 6897500 0 5895500 15449000 33958 414 31035 285482;285483;285484;285485;285486;285487;285488;285489 225947 225947 1 LYLEAFR Unmodified 910.49125 0.49125301 3615 Q92538 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 71.463 71.529 2 0.032282 81517 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.039 38.334 19060000 0 0 0 1441500 0 1764800 1556400 1694800 0 2326900 0 0 1762800 2491000 6021400 33959 3615 31036 285490;285491;285492;285493;285494;285495;285496;285497 225948 225948 1 LYLEDDDPVQAEAYINR Unmodified 2022.9535 0.95345032 4137 Q9BT78 COPS4 COP9 signalosome complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 80.401 80.505 2 1.9365E-60 93119 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 167.44 149.31 57115000 0 0 0 0 2867100 3870900 1732900 3050800 2696600 9988200 7522900 6339300 1856100 3900500 13289000 33960 4137 31037 285498;285499;285500;285501;285502;285503;285504;285505;285506;285507;285508 225949;225950;225951;225952;225953;225954;225955;225956;225957;225958;225959 225950 11 LYLEREEYGK Unmodified 1298.6507 0.65066678 1838 P61201 COPS2 COP9 signalosome complex subunit 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.33 2.21 2 22 1 1 2 2 2 1 2 2 2 2 2 2 1 2 39.023 38.741 2;3 0.00166 42973 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 74.267 46.623 808160000 234770000 0 118570000 17647000 16356000 41549000 3144000 27861000 18943000 41717000 62515000 65207000 44799000 7402000 107680000 33961 1838 31038 285509;285510;285511;285512;285513;285514;285515;285516;285517;285518;285519;285520;285521;285522;285523;285524;285525;285526;285527;285528;285529;285530;285531;285532 225960;225961;225962;225963;225964;225965;225966;225967;225968;225969 225963 8 LYLINSPVVR Unmodified 1172.6917 0.69174374 1441 P41252 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.918 76.979 2 0.00090024 88205 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 133.55 61.41 555230000 0 0 0 16525000 23956000 46631000 29533000 30651000 25548000 51442000 49031000 70375000 32039000 56669000 122830000 33962 1441 31039 285533;285534;285535;285536;285537;285538;285539;285540;285541;285542;285543;285544 225970;225971;225972;225973;225974;225975;225976;225977;225978;225979;225980 225973 11 LYLLNTTK Unmodified 964.55933 0.55933258 1418 P40692 MLH1 DNA mismatch repair protein Mlh1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60.041 59.122 2 0.0031933 80169 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 170.73 122.98 328610000 72807000 23984000 0 17555000 14733000 18525000 20890000 18833000 11842000 22933000 20457000 20794000 17813000 18388000 29059000 33963 1418 31040 285545;285546;285547;285548;285549;285550;285551;285552;285553;285554;285555;285556;285557;285558 225981;225982;225983;225984;225985;225986;225987;225988;225989 225986 4 LYLLTEK Unmodified 878.51132 0.51131975 1661 P51580 TPMT Thiopurine S-methyltransferase yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 64.716 60.473 2 0.0085601 75087 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 154.11 70.885 44399000 0 14081000 30318000 0 0 0 0 0 0 0 0 0 0 0 0 33964 1661 31041 285559;285560 225990;225991 225991 0 LYLLTQMPH Unmodified 1114.5845 0.58450147 5194 Q9Y4C2 TCAF1 TRPM8 channel-associated factor 1 yes yes 0 0 0 By MS/MS 2 0 1 1 86.418 78.288 2 0.0029397 102009 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 116.54 116.54 41760000 41760000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33965 5194 31042 285561 225992 225992 1 LYLNSNK Unmodified 850.45487 0.45486751 2228 Q13045 FLII Protein flightless-1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.376 22.581 2 0.023373 23841 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 88.643 22.745 98556000 0 0 0 3721600 3398900 6008100 4856500 5883400 4762500 8345700 13415000 11717000 8211200 11012000 17224000 33966 2228 31043 285562;285563;285564;285565;285566;285567;285568;285569;285570;285571;285572;285573 225993;225994;225995;225996;225997;225998;225999;226000 225993 8 LYLPQEPTSEETPR Unmodified 1658.8152 0.81516593 2938 Q6P5Z2 PKN3 Serine/threonine-protein kinase N3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.936 63.032 2 4.1132E-19 71972 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 133.89 118.26 126350000 0 0 0 6162500 8881100 9541300 10556000 10077000 7360600 9800600 12395000 15464000 12292000 9374400 14444000 33967 2938 31044 285574;285575;285576;285577;285578;285579;285580;285581;285582;285583;285584;285585 226001;226002;226003;226004;226005;226006;226007;226008;226009;226010;226011;226012;226013;226014;226015 226011 15 LYLPVQNK Unmodified 973.55967 0.55966693 5272 Q9Y6A4 CFAP20 Cilia- and flagella-associated protein 20 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.8 2.86 3 17 1 1 1 2 2 2 2 1 2 1 1 1 1 1 1 58.402 57.542 2 0.012146 69457 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.98 77.981 380290000 121670000 129510000 3872900 10573000 11543000 13866000 10066000 6403800 9323700 6274800 10801000 20398000 7135400 7490500 11358000 33968 5272 31045 285586;285587;285588;285589;285590;285591;285592;285593;285594;285595;285596;285597;285598;285599;285600;285601;285602;285603;285604;285605 226016;226017;226018;226019;226020;226021;226022;226023;226024;226025 226016 9 LYLTNSK Unmodified 837.45962 0.45961853 128 O00203;Q13367 AP3B1;AP3B2 AP-3 complex subunit beta-1;AP-3 complex subunit beta-2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27.515 26.789 2 0.015952 34477 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.38 27.053 769110000 293860000 164460000 10854000 16456000 16576000 22633000 21128000 22112000 16831000 27963000 29839000 36297000 30792000 26867000 32432000 33969 128 31046 285606;285607;285608;285609;285610;285611;285612;285613;285614;285615;285616;285617;285618;285619;285620 226026;226027;226028;226029;226030;226031;226032;226033;226034 226028 8 LYLTTNSK Unmodified 938.5073 0.50729701 5000 Q9ULM3 YEATS2 YEATS domain-containing protein 2 yes yes 0 0 0 By MS/MS 10 0 1 1 31.901 31.945 2 0.039811 34885 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 81.191 29.618 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33970 5000 31047 285621 226035 226035 1 LYLVDLAGSEK Unmodified 1206.6496 0.64960415 1328 P33176;O60282;Q12840 KIF5B;KIF5C;KIF5A Kinesin-1 heavy chain;Kinesin heavy chain isoform 5C;Kinesin heavy chain isoform 5A yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 78.579 77.455 2 2.7627E-05 89471 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 119.68 65.523 1156800000 33916000 300310000 31766000 39456000 46430000 87059000 52234000 52574000 42831000 77094000 83350000 83065000 62802000 55646000 108280000 33971 1328 31048 285622;285623;285624;285625;285626;285627;285628;285629;285630;285631;285632;285633;285634;285635;285636;285637 226036;226037;226038;226039;226040;226041;226042;226043;226044;226045;226046;226047;226048;226049;226050;226051;226052 226044 16 LYMNPYAESELK Oxidation (M) 1472.6857 0.68573166 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.64 1.67 1 21 1 2 2 2 2 2 2 2 2 2 2 1 55.852 55.927 2 0.00035289 63245 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 78.098 62.516 192430000 0 0 0 10568000 16239000 13211000 19002000 20265000 13620000 20605000 20440000 27709000 21813000 8962300 0 33972 3023 31049 285638;285639;285640;285641;285642;285643;285644;285645;285646;285647;285648;285649;285650;285651;285652;285653;285654;285655;285656;285657;285658;285659 226053;226054;226055;226056;226057;226058;226059;226060;226061;226062;226063;226064 226059 4632 11 LYMNPYAESELK Unmodified 1456.6908 0.69081704 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 69.076 69.117 2 0.001229 79941 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 80.763 69.195 141860000 0 0 0 6564000 8779400 9520200 8149600 16478000 10496000 14707000 19516000 21584000 13447000 12620000 0 33973 3023 31049 285660;285661;285662;285663;285664;285665;285666;285667;285668;285669;285670 226065;226066;226067;226068;226069;226070;226071;226072;226073;226074;226075;226076;226077;226078 226078 14 LYMVLITTK Unmodified 1080.6253 0.62530365 1538 P48444 ARCN1 Coatomer subunit delta yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 80.471 80.36 2 0.0052698 92388 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.334 78.334 42906000 0 0 2992000 0 791890 4273200 1370600 3481600 2583700 6219600 3212200 4265400 2257700 3654500 7803300 33974 1538 31050 285671;285672;285673;285674;285675;285676;285677;285678;285679;285680;285681;285682 226079;226080;226081;226082;226083;226084;226085;226086;226087 226082 9 LYNLFLK Unmodified 909.53239 0.53238955 3875 Q96I99 SUCLG2 Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 86.022 77.891 2 0.02854 101647 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.957 42.248 4346200 4346200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33975 3875 31051 285683 226088 226088 1 LYNNHEIR Unmodified 1057.5305 0.53049207 407 O60506 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 16.179 16.25 2 0.036193 14774 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.323 54.852 33045000 0 0 0 2418900 1587900 2264400 3419100 0 2039400 0 0 0 6363900 0 14952000 33976 407 31052 285684;285685;285686;285687;285688;285689;285690 226089 226089 0 LYNNHEIRSGK Unmodified 1329.6789 0.67894722 407 O60506 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q yes yes 0 0 1 By MS/MS 2 0 2 2 16.665 12.455 2;3 0.0011814 18385 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.767 79.623 167100000 167100000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33977 407 31053 285691;285692 226090;226091 226091 1 LYNNITFEELGALLEIPAAK Unmodified 2218.1885 0.18853564 4137 Q9BT78 COPS4 COP9 signalosome complex subunit 4 yes yes 0 0 0 By MS/MS 2 0 2 2 102.68 97.961 2;3 3.8811E-08 121055 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.3 96.589 19924000 0 19924000 0 0 0 0 0 0 0 0 0 0 0 0 0 33978 4137 31054 285693;285694 226092;226093 226093 2 LYNPENIYLSEHGGGAGNNWASGFSQGEK Unmodified 3095.4009 0.40094104 1152 P23258;Q9NRH3 TUBG1;TUBG2 Tubulin gamma-1 chain;Tubulin gamma-2 chain yes no 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 84.94 79.417 3 1.3556E-78 101068 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 126.99 122.37 75486000 60106000 15380000 0 0 0 0 0 0 0 0 0 0 0 0 0 33979 1152 31055 285695;285696;285697 226094;226095 226095 2 LYNSEESRPYTNK Unmodified 1599.7529 0.75290002 4752 Q9NYV4 CDK12 Cyclin-dependent kinase 12 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.697 22.903 3 0.0018115 22843 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 57.425 43.416 83414000 0 0 0 4443800 3341300 6007600 3981500 8073100 4846100 6349000 8156500 9401700 9058500 10083000 9671400 33980 4752 31056 285698;285699;285700;285701;285702;285703;285704;285705;285706;285707;285708;285709 226096;226097;226098;226099;226100;226101;226102 226101 7 LYNSIGNYEK Unmodified 1199.5823 0.58225287 3644 Q92624 APPBP2 Amyloid protein-binding protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 48.074 42.511 2 0.014355 55279 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.083 40.959 30107000 0 30107000 0 0 0 0 0 0 0 0 0 0 0 0 0 33981 3644 31057 285710 226103 226103 1 LYNTCAVFGPDGTLLAK Unmodified 1838.9237 0.92367052 4573 Q9NQR4 NIT2 Omega-amidase NIT2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 3 1 86.438 81.763 2 2.4008E-47 103179 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 139.89 124.68 337990000 7816700 325520000 4658500 0 0 0 0 0 0 0 0 0 0 0 0 33982 4573 31058 285711;285712;285713;285714;285715 226104;226105;226106;226107 226104 4 LYNTESQSFR Unmodified 1243.5833 0.5833155 4769 Q9NZJ0 DTL Denticleless protein homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 35.938 35.992 2 0.0031171 39722 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 79.474 62.934 39030000 0 0 0 4118900 5284500 5962700 5439700 3796700 0 0 6272600 0 3558900 4595800 0 33983 4769 31059 285716;285717;285718;285719;285720;285721;285722;285723 226108;226109;226110;226111;226112;226113 226111 6 LYNTESQSFRK Unmodified 1371.6783 0.67827852 4769 Q9NZJ0 DTL Denticleless protein homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 2 1 1 1 1 1 1 1 1 26.411 26.597 3 0.0027982 28371 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 42.809 27.778 90941000 0 0 0 3200000 5087400 13062000 10549000 6705600 6079000 10220000 5489500 5622700 7194400 6252300 11479000 33984 4769 31060 285724;285725;285726;285727;285728;285729;285730;285731;285732;285733;285734;285735;285736 226114;226115;226116;226117;226118;226119;226120;226121;226122;226123 226115 10 LYNVVVDTEVTGK Unmodified 1435.7559 0.75586013 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 0 0 By MS/MS 10 0 1 1 67.435 67.953 2 0.0087247 77310 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.056 41.537 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33985 643 31061 285737 226124 226124 1 LYNVVVDTEVTGKK Unmodified 1563.8508 0.85082315 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 0 1 By matching By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 58.409 58.62 3 0.0011355 66626 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 33.008 24.832 12456000 0 0 0 0 0 0 2395000 0 0 3097800 4651700 0 0 2311400 0 33986 643 31062 285738;285739;285740;285741 226125;226126 226126 2 LYPAAVDTIVAIMAEGK Unmodified 1760.9383 0.93825795 4990 Q9ULC4 MCTS1 Malignant T-cell-amplified sequence 1 yes yes 0 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 1 3 101.37 96.131 3 3.7314E-05 120139 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.565 49.016 39318000 21016000 18302000 0 0 0 0 0 0 0 0 0 0 0 0 0 33987 4990 31063 285742;285743;285744;285745 226127;226128;226129 226129 3 LYPAVNQQETPLPR Unmodified 1624.8573 0.85730551 2987 Q6VN20 RANBP10 Ran-binding protein 10 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By matching By matching 10 0 7 1 1 1 1 1 1 1 64.18 64.427 2 0.0015527 74050 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 71.555 56.353 38223000 0 0 0 0 0 3433200 4755000 0 0 0 0 9192600 5177800 5691900 9972800 33988 2987 31064 285746;285747;285748;285749;285750;285751;285752 226130;226131 226130 2 LYPEFPPK Unmodified 989.52222 0.52221879 3301 Q8N0X7 SPG20 Spartin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 2 1 3 1 1 1 1 1 2 2 1 62.019 62.097 2 0.02509 71128 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 58.981 43.542 132230000 0 0 0 7622200 12634000 4484500 16138000 14308000 3774500 9201800 15794000 4727900 17111000 20547000 5885300 33989 3301 31065 285753;285754;285755;285756;285757;285758;285759;285760;285761;285762;285763;285764;285765;285766;285767;285768;285769 226132;226133;226134;226135;226136;226137;226138;226139;226140;226141;226142;226143;226144;226145;226146;226147;226148 226136 17 LYPEGLAQLAR Unmodified 1229.6768 0.67682195 1848 P61421 ATP6V0D1 V-type proton ATPase subunit d 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 76.603 76.622 2 0.0054636 88851 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 58.981 37.517 32632000 0 0 0 3277400 3145700 0 2847100 3461500 0 4741500 4547800 5590800 0 5020400 0 33990 1848 31066 285770;285771;285772;285773;285774;285775;285776;285777 226149;226150;226151;226152;226153 226152 5 LYPPGDEEEAELADSSGLYHEGSPSPGSPWK Unmodified 3300.4735 0.47349686 3409 Q8NCF5 NFATC2IP NFATC2-interacting protein yes yes 0 0 0 By MS/MS 2 0 1 1 82.701 80.239 3 0.004036 97253 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 25.499 23.57 4416400 0 0 4416400 0 0 0 0 0 0 0 0 0 0 0 0 33991 3409 31067 285778 226154 226154 1 LYPQLSSVHQK Unmodified 1298.6983 0.69828568 2830 Q5VZ89 DENND4C DENN domain-containing protein 4C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.72 2 13 1 1 1 2 1 1 1 1 1 1 1 1 1 1 42.296 41.622 3 0.0005944 46231 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 60.641 42.778 199440000 36824000 0 10576000 12351000 8926200 11170000 10658000 14144000 9989200 16158000 11132000 18907000 14539000 10614000 13448000 33992 2830 31068 285779;285780;285781;285782;285783;285784;285785;285786;285787;285788;285789;285790;285791;285792;285793 226155;226156;226157;226158;226159;226160;226161;226162;226163;226164;226165 226159 9 LYPTLVIR Unmodified 973.59605 0.59605244 4477 Q9H9T3 ELP3 Elongator complex protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.759 74.824 2 0.014031 86564 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 71.141 57.366 102630000 0 0 0 3245500 4991700 9366900 5816500 7431500 5970900 9817900 10847000 12190000 7912000 7491000 17551000 33993 4477 31069 285794;285795;285796;285797;285798;285799;285800;285801;285802;285803;285804;285805 226166;226167;226168;226169;226170;226171 226171 6 LYPVFFLK Unmodified 1025.595 0.5949898 1738 P54277 PMS1 PMS1 protein homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 90.002 90.122 2 0.024817 104374 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.205 40.423 5401300 0 0 0 0 0 1064400 0 583510 0 1209400 0 0 0 727510 1816500 33994 1738 31070 285806;285807;285808;285809;285810 226172 226172 1 LYQAGEGR Unmodified 892.44028 0.44028008 1100 P20073 ANXA7 Annexin A7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 12.569 12.755 2 0.011282 11615 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 77.282 55.982 220320000 0 0 0 10685000 0 25450000 18657000 17558000 9854900 24164000 18670000 24945000 17061000 19629000 33646000 33995 1100 31071 285811;285812;285813;285814;285815;285816;285817;285818;285819;285820;285821 226173;226174;226175;226176;226177;226178;226179;226180;226181 226176 8 LYQAMGYEVDTSSAIYK Oxidation (M) 1953.903 0.90299466 5033 Q9UNI6 DUSP12 Dual specificity protein phosphatase 12 yes yes 0 1 0 By MS/MS 2 0 1 1 71.803 66.076 2 7.9347E-36 83771 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 132.59 117.71 34628000 0 34628000 0 0 0 0 0 0 0 0 0 0 0 0 0 33996 5033 31072 285822 226182 226182 6383 1 LYQDQLQK Unmodified 1034.5397 0.53965977 201 O14657 TOR1B Torsin-1B yes yes 0 0 0 By MS/MS 2 0 1 1 29.903 25.51 2 0.029412 33408 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.774 23.308 27815000 0 27815000 0 0 0 0 0 0 0 0 0 0 0 0 0 33997 201 31073 285823 226183 226183 1 LYQEIISYFDK Unmodified 1417.7129 0.71293269 4433 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 yes yes 0 0 0 By MS/MS 2 0 1 1 93.149 85.018 2 0.0049207 110172 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.662 55.576 4604900 4604900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33998 4433 31074 285824 226184 226184 1 LYQEMFAWK Unmodified 1214.5794 0.57941609 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.83 4.18 1 2 3 2 1 1 1 1 80.841 80.024 2 0.0038923 92423 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 112.17 88.216 67390000 50396000 0 3512600 0 0 3012100 0 2638600 0 0 0 0 0 0 7829800 33999 2392 31075 285825;285826;285827;285828;285829;285830 226185;226186;226187;226188 226185 4 LYQEMFAWK Oxidation (M) 1230.5743 0.57433072 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 1 0 By MS/MS 2 0 1 1 75.579 67.449 2 0.006433 89092 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.28 58.161 14335000 14335000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34000 2392 31075 285831 226189;226190 226190 3910 2 LYQEVEIASVDAFQGREK Unmodified 2081.0429 0.042934032 3683 Q92900 UPF1 Regulator of nonsense transcripts 1 yes yes 0 0 1 By MS/MS 2 0 1 1 82.324 74.194 3 2.456E-05 97138 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.732 61.307 16967000 16967000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34001 3683 31076 285832 226191 226191 1 LYQFIEPFEEK Unmodified 1441.7129 0.71293269 4467 Q9H9A5 CNOT10 CCR4-NOT transcription complex subunit 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84.378 83.905 2 3.802E-09 104711 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 133.23 102.97 152910000 0 60735000 3855300 0 4888400 6951000 6306900 9249600 7014500 8858100 8843300 6733500 4705500 6815900 17955000 34002 4467 31077 285833;285834;285835;285836;285837;285838;285839;285840;285841;285842;285843;285844;285845;285846 226192;226193;226194;226195;226196;226197;226198;226199;226200;226201;226202;226203;226204;226205;226206 226195 15 LYQGGPGGGSGGGGSGASGGPTIEEVD Unmodified 2319.0251 0.025111716 1743 P54652 HSPA2 Heat shock-related 70 kDa protein 2 yes yes 0 0 0 By MS/MS 1 0 1 1 100.63 105.89 3 0.01456 85344 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 9.7309 6.4435 6586000 6586000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34003 1743 31078 285847 226207 226207 1 LYQPEYQEVSTEEQREEISGK Unmodified 2541.1871 0.18709167 5206 Q9Y4L1 HYOU1 Hypoxia up-regulated protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 59.785 58.45 3 1.1263E-103 76474 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 175.52 170.86 565830000 83385000 249000000 13365000 8740600 6883900 18515000 10654000 9754400 10447000 21619000 23497000 24986000 11340000 16067000 57578000 34004 5206 31079 285848;285849;285850;285851;285852;285853;285854;285855;285856;285857;285858;285859;285860;285861;285862;285863 226208;226209;226210;226211;226212;226213;226214;226215;226216;226217;226218;226219;226220;226221;226222;226223;226224;226225;226226;226227;226228 226216 20 LYQQHGAGLFDVTR Unmodified 1603.8107 0.81068967 212 O14773 TPP1 Tripeptidyl-peptidase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.309 62.407 3 0.001013 71048 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 41.743 36.104 73816000 0 0 0 7877700 2623600 5559700 3225900 5114400 2850600 7366000 7232800 9083000 5049700 6040700 11792000 34005 212 31080 285864;285865;285866;285867;285868;285869;285870;285871;285872;285873;285874;285875 226229;226230;226231;226232;226233 226233 5 LYQSAGGMPGGMPGGFPGGGAPPSGGASSGPTIEEVD Unmodified 3345.4918 0.49180624 934 P11142 HSPA8 Heat shock cognate 71 kDa protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.62 3.25 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 89.248 89.813 3;4 6.1946E-10 100776 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 34.255 32.509 313180000 17132000 22225000 0 0 10663000 9656200 4903800 12687000 5843900 25786000 32151000 25357000 4796400 16192000 125790000 34006 934 31081 285876;285877;285878;285879;285880;285881;285882;285883;285884;285885;285886;285887;285888 226234;226235;226236;226237;226238;226239;226240;226241;226242 226238 9 LYQSATQAVFQK Unmodified 1382.7194 0.71941505 3652 Q92696 RABGGTA Geranylgeranyl transferase type-2 subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 59.257 53.283 2 2.7686E-10 71738 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 125.97 82.723 142170000 60196000 80818000 1160900 0 0 0 0 0 0 0 0 0 0 0 0 34007 3652 31082 285889;285890;285891 226243;226244 226244 2 LYQTDPSGTYHAWK Unmodified 1665.7787 0.77872084 219 O14818;Q8TAA3 PSMA7;PSMA8 Proteasome subunit alpha type-7;Proteasome subunit alpha type-7-like yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 49.078 49.156 3 3.4374E-17 54232 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 109 96.852 340810000 0 0 0 47525000 11902000 0 22321000 22428000 12385000 0 68764000 0 0 44027000 111460000 34008 219 31083 285892;285893;285894;285895;285896;285897;285898;285899 226245;226246;226247;226248;226249;226250;226251;226252;226253;226254;226255 226246 11 LYQTPLELK Unmodified 1103.6227 0.62266112 1707 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 67.3 65.981 2 8.3709E-06 84846 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 155.75 90.977 297500000 7033600 106750000 5308700 7572800 9277000 14362000 13895000 11926000 9748100 15914000 16678000 21232000 17378000 15272000 25155000 34009 1707 31084 285900;285901;285902;285903;285904;285905;285906;285907;285908;285909;285910;285911;285912;285913;285914;285915 226256;226257;226258;226259;226260;226261;226262;226263;226264;226265;226266;226267;226268;226269;226270;226271;226272 226260 16 LYQVEYAFK Unmodified 1159.5914 0.59136099 1819 P60900 PSMA6 Proteasome subunit alpha type-6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 69.468 69.539 2 0.0034849 79646 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 103.74 64.947 253650000 0 0 0 12897000 4111000 6917400 4871600 9904100 3740900 8219300 37769000 37259000 0 21075000 106880000 34010 1819 31085 285916;285917;285918;285919;285920;285921;285922;285923;285924;285925;285926 226273;226274;226275;226276;226277;226278;226279;226280;226281;226282 226275 10 LYQVLEGENK Unmodified 1191.6136 0.61355299 2855 Q68CZ6 HAUS3 HAUS augmin-like complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 47.283 47.793 2 0.0028772 54030 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 92.838 49.714 21201000 0 0 0 0 0 5528100 0 0 0 0 0 8087200 0 0 7585500 34011 2855 31086 285927;285928;285929;285930;285931;285932;285933 226283;226284;226285;226286;226287;226288;226289 226283 7 LYQVMETK Unmodified 1010.5107 0.51066783 4331;1 Q9H0K1;A0A0B4J2F2;P57059 SIK2;LOC102724428;SIK1 Serine/threonine-protein kinase SIK2;Serine/threonine-protein kinase SIK1 no no 0 0 0 By MS/MS By matching 10 0 2 1 1 39.978 40.205 2 0.023017 44752 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 60.682 30.875 5660000 0 0 0 0 0 0 0 3235100 0 0 0 0 0 2424800 0 34012 4331;1 31087 285934;285935 226290 226290 1 LYQYPNFAGPHAALANK Unmodified 1873.9475 0.9475175 4242 Q9BY44 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 68.403 68.534 3 0.00052492 78656 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 53.981 48.201 72224000 0 0 0 2753600 0 9647600 3359900 5402200 3342200 8136000 7856800 6037200 3741600 6450500 15497000 34013 4242 31088 285936;285937;285938;285939;285940;285941;285942;285943;285944;285945;285946 226291;226292;226293;226294;226295;226296;226297;226298 226292 8 LYQYSNPAVK Unmodified 1181.6081 0.60807369 4642 Q9NUA8 ZBTB40 Zinc finger and BTB domain-containing protein 40 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 41.471 41.597 2 0.0026435 46319 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 81.548 26.998 45689000 0 0 0 2748600 3694300 3846900 4250300 3993600 0 6958600 5014000 5914400 5503300 3765100 0 34014 4642 31089 285947;285948;285949;285950;285951;285952;285953;285954;285955;285956 226299;226300;226301;226302;226303;226304;226305;226306 226303 8 LYRAALETDENLLLCAPTGAGK Unmodified 2375.2155 0.21549544 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 85.551 79.668 3 1.7372E-88 102367 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 155.16 144.25 89996000 89996000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34015 528 31090 285957;285958 226307;226308;226309 226309 3 LYRETNEPVK Unmodified 1247.651 0.65100113 973 P12956 XRCC6 X-ray repair cross-complementing protein 6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.26 6 2 27 3 3 2 2 2 2 3 3 2 3 2 2 2 2 2 19.612 18.838 2;3 0.0010293 17708 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.549 68.173 9131900000 3913900000 1774200000 1406800000 142260000 152240000 168100000 139610000 117050000 150860000 175710000 150760000 222410000 143460000 116500000 358080000 34016 973 31091 285959;285960;285961;285962;285963;285964;285965;285966;285967;285968;285969;285970;285971;285972;285973;285974;285975;285976;285977;285978;285979;285980;285981;285982;285983;285984;285985;285986;285987;285988;285989;285990;285991;285992;285993 226310;226311;226312;226313;226314;226315;226316;226317;226318;226319;226320;226321;226322;226323;226324;226325;226326;226327;226328;226329;226330;226331;226332;226333 226316 17 LYRLPETPK Unmodified 1115.6339 0.63389451 1280 P30419 NMT1 Glycylpeptide N-tetradecanoyltransferase 1 yes yes 0 0 1 By MS/MS 2 0 1 1 55.909 47.761 2 0.0068181 65320 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 140.63 106.25 91574000 91574000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34017 1280 31092 285994 226334 226334 0 LYRPGSVAYVSR Unmodified 1366.7357 0.73573382 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 2 1 2 2 44.094 44.259 2;3 3.705E-35 49307 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 177.64 152.79 18291000000 0 0 0 526490000 961960000 1266400000 3610700000 4360900000 4173800000 650910000 944940000 1418900000 45056000 92505000 238240000 34018 1714 31093 285995;285996;285997;285998;285999;286000;286001;286002;286003;286004;286005;286006;286007;286008;286009;286010;286011;286012;286013;286014;286015;286016;286017 226335;226336;226337;226338;226339;226340;226341;226342;226343;226344;226345;226346;226347;226348;226349;226350;226351;226352;226353;226354;226355;226356 226343 20 LYRPPPVLDALGR Unmodified 1465.8405 0.84053324 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 77.527 77.579 3 0.001395 89110 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.604 50.262 174540000 0 0 0 5393100 4628000 24728000 6402400 12560000 10285000 14777000 10084000 24685000 13317000 0 47677000 34019 3641 31094 286018;286019;286020;286021;286022;286023;286024;286025;286026;286027;286028 226357;226358;226359 226358 3 LYRSIGEYDVLR Unmodified 1482.7831 0.78307794 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 37.776 37.88 3 0.016583 41877 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 32.062 11.109 51720000 0 0 0 0 0 16025000 0 0 15297000 20397000 0 0 0 0 0 34020 1986 31095 286029;286030;286031 226360 226360 1 LYRVEYAK Unmodified 1040.5655 0.56548059 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 36.595 31.675 2 0.014757 44297 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 141.52 87.964 243720000 223040000 18215000 2466700 0 0 0 0 0 0 0 0 0 0 0 0 34021 894 31096 286032;286033;286034 226361;226362 226362 2 LYSDIPHSWICEK Unmodified 1646.7763 0.776278 2561 Q15652 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C yes yes 0 0 0 By MS/MS 2 0 1 1 79.748 71.618 3 0.0084554 94079 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.189 40.568 6679900 6679900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34022 2561 31097 286035 226363 226363 1 LYSEDELPAEFK Unmodified 1439.682 0.68202649 5272 Q9Y6A4 CFAP20 Cilia- and flagella-associated protein 20 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.756 72.82 2 3.9447E-05 83306 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.38 81.464 105260000 0 0 0 7151400 7440900 9060700 6142200 6000200 5650000 9525200 10364000 12028000 7440300 9451000 15007000 34023 5272 31098 286036;286037;286038;286039;286040;286041;286042;286043;286044;286045;286046;286047 226364;226365;226366;226367;226368;226369;226370;226371;226372;226373;226374 226366 11 LYSEMEQLK Unmodified 1139.5533 0.55326092 3427 Q8NEM2 SHCBP1 SHC SH2 domain-binding protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 55.459 50.112 2 0.0074724 64646 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.36 52.802 106540000 0 106540000 0 0 0 0 0 0 0 0 0 0 0 0 0 34024 3427 31099 286048;286049 226375 226375 1 LYSEMEQLK Oxidation (M) 1155.5482 0.54817555 3427 Q8NEM2 SHCBP1 SHC SH2 domain-binding protein 1 yes yes 0 1 0 By MS/MS 10 0 1 1 30.878 31.347 2 0.051961 33884 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 53.753 28.809 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34025 3427 31099 286050 226376 226376 1 LYSENEGMASNQGK Unmodified 1526.6671 0.66712148 3811 Q96EI5 TCEAL4 Transcription elongation factor A protein-like 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 2 1 1 1 1 1 1 26.281 25.245 2 3.6303E-45 31191 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 219.03 202.36 138500000 3492200 69014000 0 6487500 0 0 6490400 0 6000000 0 0 17863000 0 11782000 17375000 34026 3811 31100 286051;286052;286053;286054;286055;286056;286057;286058;286059;286060;286061;286062;286063;286064 226377;226378;226379;226380;226381;226382;226383;226384;226385;226386;226387;226388 226379 12 LYSENEGMASNQGK Oxidation (M) 1542.662 0.6620361 3811 Q96EI5 TCEAL4 Transcription elongation factor A protein-like 4 yes yes 0 1 0 By MS/MS By MS/MS 6 4 1 1 1 1 17.323 13.903 2 9.5225E-06 18237 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.72 95.408 9322500 0 9322500 0 0 0 0 0 0 0 0 0 0 0 0 0 34027 3811 31100 286065;286066 226389;226390 226389 5334 2 LYSESLAR Unmodified 937.4869 0.48689592 1620;1294 P50395;P31150 GDI2;GDI1 Rab GDP dissociation inhibitor beta;Rab GDP dissociation inhibitor alpha no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 33.956 33.435 2 0.0043294 35687 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 131.04 44.95 916530000 0 364420000 0 27380000 12464000 13134000 16030000 28238000 12492000 20169000 92326000 64959000 18611000 55626000 190680000 34028 1620;1294 31101 286067;286068;286069;286070;286071;286072;286073;286074;286075;286076;286077;286078;286079;286080 226391;226392;226393;226394;226395;226396;226397;226398;226399 226394 8 LYSESLARYGK Unmodified 1285.6667 0.6666512 1620;1294 P50395;P31150 GDI2;GDI1 Rab GDP dissociation inhibitor beta;Rab GDP dissociation inhibitor alpha no no 0 0 1 By MS/MS By MS/MS By MS/MS 2.38 0.484 5 3 4 3 1 48.237 42.419 2;3 2.6364E-07 55476 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145.84 112.84 1857200000 1452300000 325960000 78871000 0 0 0 0 0 0 0 0 0 0 0 0 34029 1620;1294 31102 286081;286082;286083;286084;286085;286086;286087;286088 226400;226401;226402;226403;226404;226405;226406;226407 226401 5 LYSFYDLESNINK Unmodified 1604.7722 0.77223848 4431 Q9H7B4 SMYD3 Histone-lysine N-methyltransferase SMYD3 yes yes 0 0 0 By MS/MS 2 0 1 1 88.42 83.578 2 2.6245E-25 103934 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 157.78 129.08 78250000 0 78250000 0 0 0 0 0 0 0 0 0 0 0 0 0 34030 4431 31103 286089 226408 226408 1 LYSILGTTLK Unmodified 1107.654 0.65396125 453 O75083 WDR1 WD repeat-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 80.335 79.388 2 3.3926E-06 91476 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 149.94 95.387 151630000 7959500 0 0 3698300 0 0 0 3013800 0 0 19810000 19952000 2095300 20223000 74875000 34031 453 31104 286090;286091;286092;286093;286094;286095;286096;286097 226409;226410;226411;226412;226413;226414;226415 226409 7 LYSILQGDSPTK Unmodified 1320.6925 0.6925316 244 O15042 U2SURP U2 snRNP-associated SURP motif-containing protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65.114 64.185 2 2.5812E-05 81758 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.81 118.1 321530000 6050900 99445000 0 9961000 12257000 14173000 18357000 13629000 7327300 24743000 21748000 32271000 16428000 15040000 30098000 34032 244 31105 286098;286099;286100;286101;286102;286103;286104;286105;286106;286107;286108;286109;286110;286111 226416;226417;226418;226419;226420;226421;226422;226423;226424;226425;226426;226427 226419 11 LYSLALHPNAFK Unmodified 1372.7503 0.75032125 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 72.138 72.329 3 0.030883 82719 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 34.695 27.033 27052000 0 0 0 0 0 6612700 1664100 0 0 3869200 0 5418600 0 0 9487100 34033 1986 31106 286112;286113;286114;286115;286116 226428;226429 226429 2 LYSLDPEQK Unmodified 1091.5499 0.5498901 128 O00203 AP3B1 AP-3 complex subunit beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 47.713 47.095 2 2.3968E-05 52229 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 153.78 124.4 701920000 0 342670000 0 19281000 22007000 26925000 28436000 27120000 24706000 30106000 35447000 33274000 38628000 28596000 44725000 34034 128 31107 286117;286118;286119;286120;286121;286122;286123;286124;286125;286126;286127;286128;286129;286130 226430;226431;226432;226433;226434;226435;226436;226437;226438;226439;226440;226441;226442;226443;226444;226445;226446 226436 15 LYSLFLK Unmodified 882.52149 0.52149051 4827 Q9P2R7 SUCLA2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 86.122 77.992 2 0.041516 101667 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.939 58.955 8845300 8845300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34035 4827 31108 286131 226447 226447 1 LYSLLSDPIPEVR Unmodified 1500.8188 0.81879474 3304 Q8N122 RPTOR Regulatory-associated protein of mTOR yes yes 0 0 0 By MS/MS 10 0 1 1 87.43 87.585 2 0.0001506 101329 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.17 63.841 3135500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3135500 34036 3304 31109 286132 226448 226448 1 LYSLSVLYK Unmodified 1084.6168 0.61684746 288 O15498 YKT6 Synaptobrevin homolog YKT6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 78.675 78.777 2 0.0051376 90545 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.452 31.117 36501000 0 0 0 0 3242400 0 0 5280500 0 0 5115100 9341800 0 0 13521000 34037 288 31110 286133;286134;286135;286136;286137 226449 226449 1 LYSPSQIGAFVLMK Oxidation (M) 1568.8273 0.82725094 1399 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 87.555 87.703 2 0.0022035 101430 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.44 32.302 12851000 0 0 0 0 0 0 0 0 0 2199300 1792500 2230300 0 0 6628400 34038 1399 31111 286138;286139;286140;286141 226450 226450 2172 1 LYSSIDHESSTWIIK Unmodified 1777.8887 0.88866522 3975 Q96RS6 NUDCD1 NudC domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 78.833 73.422 2;3 1.652E-44 95130 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 133.05 99.164 23144000 7061600 0 16082000 0 0 0 0 0 0 0 0 0 0 0 0 34039 3975 31112 286142;286143 226451;226452 226451 2 LYSVSYLLK Unmodified 1084.6168 0.61684746 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.749 79.808 2 5.0835E-10 91763 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 164.53 49.75 369100000 0 0 0 8152400 11080000 22385000 18379000 22588000 13746000 33899000 33643000 53049000 22020000 27957000 102200000 34040 1124 31113 286144;286145;286146;286147;286148;286149;286150;286151;286152;286153;286154;286155 226453;226454;226455;226456;226457;226458;226459;226460;226461;226462;226463;226464 226456 12 LYSVVSQLIR Unmodified 1176.6867 0.68665836 3701;164 O00507;Q93008 USP9Y;USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-Y;Probable ubiquitin carboxyl-terminal hydrolase FAF-X no no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 82.3 82.424 2 0.009776 95007 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.256 27.132 26925000 0 0 0 0 0 4299300 0 0 0 3306000 1638600 3011100 3084600 0 11585000 34041 164;3701 31114 286156;286157;286158;286159;286160;286161 226465;226466;226467;226468;226469 226467 5 LYTDFDEIRQEIENETERISGNNK Unmodified 2912.3788 0.37880862 154 O00429 DNM1L Dynamin-1-like protein yes yes 0 0 2 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 96.734 90.229 3;4 2.109E-102 114985 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 157.59 131.11 576040000 567150000 8886100 0 0 0 0 0 0 0 0 0 0 0 0 0 34042 154 31115 286162;286163;286164 226470;226471;226472 226471 2 LYTGPGLAIHCMQVHK Oxidation (M) 1839.9124 0.91239433 352 O43670 ZNF207 BUB3-interacting and GLEBS motif-containing protein ZNF207 yes yes 0 1 0 By MS/MS 10 0 1 1 49.342 50.053 4 0.001208 55557 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.213 31.8 68111000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 68111000 34043 352 31116 286165 226473 226473 439 1 LYTGPGLAIHCMQVHK Unmodified 1823.9175 0.9174797 352 O43670 ZNF207 BUB3-interacting and GLEBS motif-containing protein ZNF207 yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 2 63.444 63.731 3;4 5.1169E-05 71947 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.669 68.778 88643000 0 0 0 0 0 3929600 1109700 0 3982400 0 3297900 9197200 4621600 7883900 54620000 34044 352 31116 286166;286167;286168;286169;286170;286171;286172;286173;286174 226474;226475;226476 226475 3 LYTLEEHLSNEMQAK Unmodified 1804.8665 0.86654957 455 O75116 ROCK2 Rho-associated protein kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 70.275 67.549 3 0.00038389 87098 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 61.732 50.292 89979000 0 66439000 16378000 0 0 0 0 0 0 0 0 0 0 0 7162300 34045 455 31117 286175;286176;286177 226477;226478;226479 226477 2 LYTLEEHLSNEMQAK Oxidation (M) 1820.8615 0.86146419 455 O75116 ROCK2 Rho-associated protein kinase 2 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 59.083 53.029 3 0.0014616 66080 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 57.288 48.754 40920000 8002000 0 32918000 0 0 0 0 0 0 0 0 0 0 0 0 34046 455 31117 286178;286179 226480 226480 578 1 LYTLQDK Unmodified 879.47018 0.47018322 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS 7.76 3.47 3 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 34.722 33.4 2 0.012413 41323 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 124.37 30.21 5081600000 234740000 3411500000 101770000 67921000 67187000 175810000 92884000 65678000 47594000 135880000 157540000 108640000 82785000 137700000 194040000 34047 1565 31118 286180;286181;286182;286183;286184;286185;286186;286187;286188;286189;286190;286191;286192;286193;286194;286195;286196 226481;226482;226483;226484;226485;226486;226487;226488;226489;226490;226491;226492;226493;226494 226490 11 LYTLVLTDPDAPSR Unmodified 1559.8195 0.81952302 1269 P30086 PEBP1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 79.587 79.761 2 0.0023651 91795 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.95 34.752 30488000 0 0 0 0 0 0 0 0 0 0 6736500 7257300 0 4384000 12111000 34048 1269 31119 286197;286198;286199;286200 226495;226496;226497 226495 3 LYTLVLTDPDAPSRK Unmodified 1687.9145 0.91448604 1269 P30086 PEBP1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.07 3.95 2 8 4 14 8 3 3 1 1 1 1 1 2 2 1 2 2 77.666 76.133 2;3 3.5804E-90 94302 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 211.37 191.07 3978700000 2585600000 292420000 417570000 26096000 6799600 0 6947300 9437600 0 0 117630000 115920000 0 84075000 316230000 34049 1269 31120 286201;286202;286203;286204;286205;286206;286207;286208;286209;286210;286211;286212;286213;286214;286215;286216;286217;286218;286219;286220;286221;286222;286223;286224;286225;286226;286227;286228 226498;226499;226500;226501;226502;226503;226504;226505;226506;226507;226508;226509;226510;226511;226512;226513;226514;226515;226516;226517;226518;226519;226520;226521;226522;226523;226524;226525;226526;226527 226514 29 LYTLVLTDPDAPSRKDPK Unmodified 2028.0892 0.089155943 1269 P30086 PEBP1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide yes yes 0 0 2 By MS/MS 2 0 1 1 76.633 68.502 4 4.926E-05 90382 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.831 47.111 24234000 24234000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34050 1269 31121 286229 226528;226529 226529 2 LYTLVTYVPVTTFK Unmodified 1643.9174 0.91744615 1926 P62899 RPL31 60S ribosomal protein L31 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 1 2 1 2 1 2 1 2 1 2 2 90.691 90.779 2;3 1.2686E-13 105408 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 134.75 125.43 212560000 0 0 0 2575400 7124400 18227000 6755000 13089000 14015000 32847000 13662000 23441000 3489300 15302000 62035000 34051 1926 31122 286230;286231;286232;286233;286234;286235;286236;286237;286238;286239;286240;286241;286242;286243;286244;286245;286246;286247 226530;226531;226532;226533;226534;226535;226536;226537;226538;226539;226540;226541;226542;226543 226532 14 LYTTMPVAK Unmodified 1022.5471 0.54705333 5084 Q9Y262 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49.144 48.086 2 0.0043999 54623 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 86.953 38.45 1115800000 51722000 853960000 9192600 7813100 8498800 20544000 9194700 13973000 8563100 18986000 22896000 19625000 15536000 17736000 37559000 34052 5084 31123 286248;286249;286250;286251;286252;286253;286254;286255;286256;286257;286258;286259;286260;286261;286262 226544;226545;226546;226547;226548;226549;226550;226551;226552;226553;226554;226555;226556 226545 13 LYTTMPVAK Oxidation (M) 1038.542 0.54196796 5084 Q9Y262 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 29.377 29.478 2 0.017395 30800 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 49.833 17.898 68138000 0 0 0 6223700 0 9561500 8197200 6248600 0 11175000 0 0 17362000 9370000 0 34053 5084 31123 286263;286264;286265;286266;286267;286268;286269 226557;226558 226558 6472 2 LYTTSPNVEESYLPSPDVLK Unmodified 2251.126 0.12599496 5056 Q9UPR0 PLCL2 Inactive phospholipase C-like protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 88.305 83.463 2 1.1794E-12 103687 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 132.97 117.42 61290000 0 61290000 0 0 0 0 0 0 0 0 0 0 0 0 0 34054 5056 31124 286270 226559 226559 1 LYTVVPR Unmodified 846.49634 0.49633839 1441 P41252 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.385 46.552 2 0.017119 52169 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 114.59 59.821 370000000 0 0 0 15869000 18129000 35406000 17764000 25276000 14041000 35941000 29481000 40896000 34586000 35339000 67266000 34055 1441 31125 286271;286272;286273;286274;286275;286276;286277;286278;286279;286280;286281;286282 226560;226561;226562;226563;226564 226562 5 LYVANVGTNR Unmodified 1105.588 0.58800695 2572 Q15750 TAB1 TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 41.599 41.106 2 0.036029 46277 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 56.258 18.7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34056 2572 31126 286283 226565 226565 1 LYVAVVGDK Unmodified 962.54368 0.54368251 3944 Q96P48 ARAP1 Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 52.161 52.843 2 0.045687 59418 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 59.35 16.435 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34057 3944 31127 286284 226566 226566 1 LYVDFPQHLR Unmodified 1286.6772 0.6771563 1449 P42226 STAT6 Signal transducer and activator of transcription 6 yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 71.71 71.789 3 0.026929 82046 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.606 29.074 37571000 0 0 0 1276300 0 6363900 0 2535100 0 0 0 4938200 2806000 4013600 15637000 34058 1449 31128 286285;286286;286287;286288;286289;286290;286291 226567 226567 1 LYVIGTGER Unmodified 1006.5447 0.54474515 3975 Q96RS6 NUDCD1 NudC domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 49.825 49.989 2 0.0033336 55159 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.561 7.0486 175350000 0 0 0 9417100 8084900 0 7266500 13329000 13909000 13523000 17993000 21640000 22704000 12724000 34759000 34059 3975 31129 286292;286293;286294;286295;286296;286297;286298;286299;286300;286301;286302 226568;226569;226570;226571 226569 4 LYVNSEK Unmodified 851.43888 0.43888309 2463 Q14C86 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 18.198 14.715 2 0.01926 19464 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.07 73.298 20441000 0 20441000 0 0 0 0 0 0 0 0 0 0 0 0 0 34060 2463 31130 286303 226572 226572 1 LYVPLYSSK Unmodified 1068.5855 0.58554733 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.832 69.909 2 0.023114 80862 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 51.193 35.561 137120000 0 0 0 8382500 7673100 10444000 8011300 8852300 7893900 12953000 11476000 14162000 12370000 13741000 21165000 34061 619 31131 286304;286305;286306;286307;286308;286309;286310;286311;286312;286313;286314;286315 226573;226574;226575;226576;226577;226578 226578 6 LYVYDLSK Unmodified 999.5277 0.5276981 2886 Q6ICB0 DESI1 Desumoylating isopeptidase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 62.353 61.012 2 0.0082561 69420 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 86.833 45.531 1094700000 7240900 90702000 5280800 59432000 58173000 53180000 65260000 151900000 43811000 86108000 97737000 80542000 104160000 80568000 110640000 34062 2886 31132 286316;286317;286318;286319;286320;286321;286322;286323;286324;286325;286326;286327;286328;286329;286330;286331 226579;226580;226581;226582;226583;226584;226585;226586;226587;226588;226589;226590;226591;226592;226593;226594 226587 15 LYYHATK Unmodified 894.45995 0.45995289 4897 Q9UHD2 TBK1 Serine/threonine-protein kinase TBK1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 18.244 14.752 2 0.030767 21588 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 91.906 49.432 43127000 37689000 0 5438100 0 0 0 0 0 0 0 0 0 0 0 0 34063 4897 31133 286332;286333 226595 226595 1 LYYHVLGTDQSEDILCAEFPDEPK Unmodified 2838.3058 0.30582659 1533 P48147 PREP Prolyl endopeptidase yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 90.821 84.98 3 4.1312E-08 108566 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.638 42.839 21362000 21362000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34064 1533 31134 286334;286335 226596;226597 226597 2 LYYQQLK Unmodified 954.51747 0.51746776 3702 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 47.015 41.195 2 0.019144 57262 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 114.6 64.477 680050000 661670000 0 18382000 0 0 0 0 0 0 0 0 0 0 0 0 34065 3702 31135 286336;286337 226598 226598 1 MAAAAELSLLEK Acetyl (Protein N-term) 1287.6744 0.67443869 319 O43324 EEF1E1 Eukaryotic translation elongation factor 1 epsilon-1 yes yes 1 0 0 By MS/MS 2 0 1 1 56.68 50.858 3 0.020042 65701 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 45.257 28.045 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34066 319 31136 286338 226599 226599 1 MAAADSVQQR Oxidation (M) 1091.503 0.50295669 3279 Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 8.4362 8.5238 2 0.0012769 6956 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 99.442 72.304 45075000 0 0 0 4658200 3993100 2637100 4872900 0 0 0 15216000 0 7165300 0 6532000 34067 3279 31137 286339;286340;286341;286342;286343;286344;286345;286346;286347 226600;226601;226602;226603;226604;226605;226606 226604 4881 7 MAAADSVQQR Unmodified 1075.508 0.50804206 3279 Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.394 15.564 2 4.4441E-32 15088 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 182.09 158.13 215260000 0 0 0 10614000 8401100 9518200 13307000 17337000 8961600 14388000 26558000 35359000 19745000 22530000 28539000 34068 3279 31137 286348;286349;286350;286351;286352;286353;286354;286355;286356;286357;286358;286359 226607;226608;226609;226610;226611;226612;226613;226614 226613 5 MAAAETQSLR Oxidation (M) 1092.5234 0.52335778 2308 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog yes yes 0 1 0 By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching 10 0 8 1 1 1 1 1 1 1 1 8.3864 8.5068 2 0.024287 6486 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 41.029 15.292 54896000 0 0 0 4722700 4359200 6057600 0 4360400 0 5908700 16719000 0 0 6500800 6268000 34069 2308 31138 286360;286361;286362;286363;286364;286365;286366;286367 226615 226615 1 MAAAGGGGGGGRYYGGGSEGGRAPK Unmodified 2197.0083 0.0082966355 1008 P14866 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes yes 0 0 2 By MS/MS 2 0 1 1 28.402 22.884 4 9.9323E-05 32407 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 32.896 29.658 5385400 5385400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34070 1008 31139 286368 226616 226616 1 MAAAGGTVSGPSSACK Unmodified 1450.6544 0.65444831 5004 Q9ULT8 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 24.285 24.698 2 0.0054339 26665 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 54.7 43.535 6568400 0 0 0 0 0 0 0 0 0 1614000 0 0 0 0 4954400 34071 5004 31140 286369;286370;286371;286372 226617;226618;226619 226617 3 MAADDVEEYMIERPEPEFQDLNEK 2 Oxidation (M) 2929.2634 0.26336943 4165 Q9BUL8 PDCD10 Programmed cell death protein 10 yes yes 0 2 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 2 2 2 2 2 2 2 1 2 2 2 75.333 75.411 3 7.1743E-77 86743 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 131.59 130.41 288040000 0 0 0 3288200 13801000 37151000 10668000 20584000 17197000 36936000 33107000 27447000 14890000 22524000 50443000 34072 4165 31141 286373;286374;286375;286376;286377;286378;286379;286380;286381;286382;286383;286384;286385;286386;286387;286388;286389;286390;286391;286392;286393;286394 226620;226621;226622;226623;226624;226625;226626;226627;226628;226629;226630;226631;226632 226621 5655;5656 13 MAADDVEEYMIERPEPEFQDLNEK Unmodified 2897.2735 0.27354019 4165 Q9BUL8 PDCD10 Programmed cell death protein 10 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 87.232 82.097 3 1.3232E-81 103984 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 140.17 136.9 63352000 37931000 20230000 5191000 0 0 0 0 0 0 0 0 0 0 0 0 34073 4165 31141 286395;286396;286397 226633;226634;226635;226636 226634 4 MAADDVEEYMIERPEPEFQDLNEK Oxidation (M) 2913.2685 0.26845481 4165 Q9BUL8 PDCD10 Programmed cell death protein 10 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 83.498 80.039 3 1.4841E-56 101241 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 127.5 124.92 44313000 20529000 0 4991400 0 0 0 0 0 0 0 0 0 0 0 18793000 34074 4165 31141 286398;286399;286400 226637;226638;226639 226638 5655;5656 3 MAAERGAFIDQSQSLNIHIAEPNYGK Oxidation (M) 2875.3923 0.39229061 1171 P23921 RRM1 Ribonucleoside-diphosphate reductase large subunit yes yes 0 1 1 By MS/MS 2 0 2 2 81.401 73.271 3;4 1.3013E-05 96030 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.938 55.95 25624000 25624000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34075 1171 31142 286401;286402 226640;226641 226640 1694 2 MAAERQEALR Acetyl (Protein N-term) 1215.603 0.60300508 5046 Q9UNZ2 NSFL1C NSFL1 cofactor p47 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 52.726 53.057 2 0.017681 60217 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 48.796 13.572 2553800000 0 0 0 0 0 147610000 0 0 192640000 328470000 404020000 487570000 263200000 264510000 465790000 34076 5046 31143 286403;286404;286405;286406;286407;286408;286409;286410 226642;226643;226644;226645;226646;226647;226648;226649 226642 7 MAAERQEALR Acetyl (Protein N-term);Oxidation (M) 1231.5979 0.5979197 5046 Q9UNZ2 NSFL1C NSFL1 cofactor p47 yes yes 1 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 38.394 38.529 2 0.0046043 42335 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 59.35 35.195 1425600000 0 0 0 115310000 123110000 107060000 0 101810000 117120000 139230000 217280000 0 181380000 142750000 180600000 34077 5046 31143 286411;286412;286413;286414;286415;286416;286417;286418;286419;286420 226650;226651;226652;226653;226654;226655 226652 6396 3 MAAETDPHK Unmodified 998.44913 0.4491302 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 7.6767 4.2976 2 0.005964 6398 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.36 90.062 136610000 5519400 131090000 0 0 0 0 0 0 0 0 0 0 0 0 0 34078 2775 31144 286421;286422 226656;226657 226656 2 MAAGELEGGK Acetyl (Protein N-term) 1003.4644 0.46444592 3356 Q8N668 COMMD1 COMM domain-containing protein 1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS 4.33 4.03 1 1 1 1 1 1 59.371 56.997 2 0.010001 17802 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 42.869 7.512 74435000 12242000 51866000 0 0 0 0 0 10328000 0 0 0 0 0 0 0 34079 3356 31145 286423;286424;286425 226658;226659;226660 226659 3 MAAGSSGAPWMPK Unmodified 1289.5897 0.5896632 3653 Q92733 PRCC Proline-rich protein PRCC yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 62.029 61.485 2 6.3548E-08 70046 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 100.48 94.695 134190000 8789500 0 0 5026400 3200700 6386200 6416200 7750000 5039900 8268800 13162000 9923200 7754400 12916000 39556000 34080 3653 31146 286426;286427;286428;286429;286430;286431;286432;286433;286434;286435;286436;286437;286438 226661;226662;226663;226664;226665;226666;226667;226668;226669;226670;226671;226672;226673 226663 13 MAAGSSGAPWMPK Oxidation (M) 1305.5846 0.58457783 3653 Q92733 PRCC Proline-rich protein PRCC yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 2 1 2 45.308 45.658 2 0.0025307 50050 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.762 33.943 16244000 0 0 0 0 0 0 2846200 0 4024300 0 4056800 0 0 0 5316500 34081 3653 31146 286439;286440;286441;286442;286443;286444 226674;226675;226676;226677 226674 5167;5168 4 MAAGSSGAPWMPK 2 Oxidation (M) 1321.5795 0.57949245 3653 Q92733 PRCC Proline-rich protein PRCC yes yes 0 2 0 By MS/MS 10 0 1 1 38.31 38.652 2 0.016188 42947 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 45.908 27.873 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34082 3653 31146 286445 226678 226678 5167;5168 1 MAAHTMGNATVGR Unmodified 1315.6125 0.61252391 1446 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 20.717 20.914 3 0.00026098 21492 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 80.31 74.077 156950000 0 0 0 6206600 9400100 12881000 8593400 12252000 0 18988000 17590000 24429000 15502000 0 31110000 34083 1446 31147 286446;286447;286448;286449;286450;286451;286452;286453;286454;286455 226679;226680;226681;226682;226683;226684;226685;226686;226687 226680 9 MAAHTMGNATVGR 2 Oxidation (M) 1347.6024 0.60235316 1446 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 0 2 0 By MS/MS By MS/MS 10 0 2 1 1 6.847 6.7209 3 0.0011063 4560 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 49.929 26.553 19127000 0 0 0 6568200 12559000 0 0 0 0 0 0 0 0 0 0 34084 1446 31147 286456;286457 226688 226688 2279;2280 1 MAAHTMGNATVGRR 2 Oxidation (M) 1503.7035 0.70346418 1446 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 0 2 1 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 5.9825 6.1388 3 5.7415E-05 3714 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 73.36 52.059 141230000 0 0 0 0 0 15985000 17627000 0 13635000 17542000 19990000 22583000 16698000 0 17169000 34085 1446 31148 286458;286459;286460;286461;286462;286463;286464;286465 226689;226690;226691;226692 226690 2279;2280 4 MAAHTMGNATVGRR Oxidation (M) 1487.7085 0.70854956 1446 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 10.439 10.658 3 0.00032542 9026 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 59.227 41.562 64482000 0 0 0 0 0 0 7175700 5979500 4016600 5532300 7096500 11691000 8593900 4662300 9733600 34086 1446 31148 286466;286467;286468;286469;286470;286471;286472;286473;286474 226693;226694;226695;226696;226697;226698;226699;226700 226700 2279;2280 8 MAAHTMGNATVGRR Unmodified 1471.7136 0.71363494 1446 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 15.879 16.083 3 3.2963E-13 14440 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.65 72 135500000 0 0 0 2609700 0 6145600 5695200 7066700 5312100 8939000 10848000 31508000 14828000 8389600 34153000 34087 1446 31148 286475;286476;286477;286478;286479;286480;286481;286482;286483;286484;286485 226701;226702;226703;226704;226705;226706;226707 226701 7 MAALEAK Oxidation (M) 748.37893 0.37892537 811 P05455 SSB Lupus La protein yes yes 0 1 0 By MS/MS 2 0 1 1 10.196 6.9313 1 0.0093101 9950 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.39 48.11 36178000 0 36178000 0 0 0 0 0 0 0 0 0 0 0 0 0 34088 811 31149 286486 226708 226708 973 0 MAAPIDR Unmodified 772.39016 0.39015876 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 2 2 2 1 1 1 2 1 1 1 1 1 25.376 25.503 2 0.01917 27027 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 110.61 28.349 2008800000 0 0 0 205020000 121420000 129390000 123000000 213780000 97703000 275410000 134230000 166730000 187270000 128390000 226460000 34089 1681 31150 286487;286488;286489;286490;286491;286492;286493;286494;286495;286496;286497;286498;286499;286500;286501;286502 226709;226710;226711;226712;226713;226714;226715;226716;226717;226718 226712 8 MAAPIDR Oxidation (M) 788.38507 0.38507338 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 13.503 13.753 2 0.021266 13255 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 73.039 8.2624 218650000 0 0 0 0 0 0 35770000 0 0 0 0 45867000 63543000 39088000 34383000 34090 1681 31150 286503;286504;286505;286506;286507 226719;226720 226719 2699 2 MAAPIDRVGQTIER Oxidation (M) 1571.809 0.80897511 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 48.141 48.131 3 0.00020088 53282 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 66.285 37.739 196420000 0 0 0 20182000 22897000 16414000 0 28672000 0 34252000 46862000 0 0 27138000 0 34091 1681 31151 286508;286509;286510;286511;286512;286513;286514 226721;226722;226723;226724;226725;226726;226727 226725 2699 4 MAAPIDRVGQTIER Unmodified 1555.8141 0.81406049 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 0 1 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.72 56.798 3 0.0021497 64131 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 48.823 19.81 279110000 0 0 0 17829000 12408000 19575000 18027000 32331000 22936000 31241000 36026000 39327000 25334000 24078000 0 34092 1681 31151 286515;286516;286517;286518;286519;286520;286521;286522;286523;286524;286525;286526 226728;226729;226730;226731;226732;226733 226730 3 MAAQCVTK Acetyl (Protein N-term) 949.43612 0.43612268 458 O75131 CPNE3 Copine-3 yes yes 1 0 0 By MS/MS 10 0 1 1 13.872 13.855 2 0.013931 13224 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 49.358 6.1738 2439200 0 0 0 0 0 0 2439200 0 0 0 0 0 0 0 0 34093 458 31152 286527 226734 226734 1 MAAQIIGNMYSLTDQK 2 Oxidation (M) 1814.8543 0.85427033 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 63.905 63.353 2 3.7914E-28 72639 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 134.08 121.52 151830000 3689500 0 0 11532000 9146300 13866000 14480000 7237400 8517300 17509000 14154000 20085000 12280000 10985000 8345600 34094 3641 31153 286528;286529;286530;286531;286532;286533;286534;286535;286536;286537;286538;286539;286540 226735;226736;226737;226738;226739;226740;226741;226742;226743;226744;226745;226746;226747;226748 226741 5152;5153 14 MAAQIIGNMYSLTDQK Oxidation (M) 1798.8594 0.8593557 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 2 1 1 1 1 1 1 1 1 78.921 78.037 2 1.1607E-59 91293 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 172.92 158.24 146250000 14481000 32659000 0 2412500 7756100 14961000 5777300 7336500 9152000 10538000 0 15359000 6060100 6622900 13132000 34095 3641 31153 286541;286542;286543;286544;286545;286546;286547;286548;286549;286550;286551;286552;286553;286554;286555 226749;226750;226751;226752;226753;226754;226755;226756;226757;226758;226759;226760;226761;226762;226763;226764 226762 5152;5153 16 MAAQIIGNMYSLTDQK Unmodified 1782.8644 0.86444108 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 83.912 82.616 2;3 1.1082E-10 103823 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 135.6 118.66 95395000 37218000 24838000 1581200 0 0 3202500 0 2322800 2088000 4447600 3615000 3809300 0 3463200 8809800 34096 3641 31153 286556;286557;286558;286559;286560;286561;286562;286563;286564;286565;286566 226765;226766;226767;226768;226769;226770;226771;226772;226773 226769 9 MAASAPPQISLPPFSK Oxidation (M) 1656.8545 0.85452832 3657 Q92766 RREB1 Ras-responsive element-binding protein 1 yes yes 0 1 0 By matching By MS/MS By matching By matching By matching By matching 10 0 6 1 1 1 1 1 1 81.656 81.634 2 0.0025269 94575 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 44.188 37.805 27106000 0 0 0 3233900 4126200 0 0 0 0 0 5101800 5672700 3880500 5091300 0 34097 3657 31154 286567;286568;286569;286570;286571;286572 226774 226774 5175 1 MAATELR Acetyl (Protein N-term) 832.41129 0.41128813 1132 P22059 OSBP Oxysterol-binding protein 1 yes yes 1 0 0 By MS/MS 2.5 0.5 1 1 2 8.9235 5.6169 2 0.035008 7590 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 52.231 18.539 82062000 0 82062000 0 0 0 0 0 0 0 0 0 0 0 0 0 34098 1132 31155 286573;286574 226775 226775 1 MAAVESQLK Unmodified 975.50592 0.5059168 5201 Q9Y4G6 TLN2 Talin-2 yes yes 0 0 0 By MS/MS 2 0 1 1 36.89 31.974 2 0.037057 41801 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.546 27.722 23436000 0 23436000 0 0 0 0 0 0 0 0 0 0 0 0 0 34099 5201 31156 286575 226776 226776 1 MAAVESQLKPLPGETLEK Unmodified 1940.0289 0.028863872 5201 Q9Y4G6 TLN2 Talin-2 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 73.944 69.393 3 6.0845E-05 87592 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.661 71.83 27649000 0 27649000 0 0 0 0 0 0 0 0 0 0 0 0 0 34100 5201 31157 286576;286577 226777 226777 1 MACGAEFSMIMDCK 3 Oxidation (M) 1697.6228 0.62275553 4806 Q9P258 RCC2 Protein RCC2 yes yes 0 3 0 By MS/MS 2.5 0.5 1 1 2 52.756 47.412 2 0.00027275 61152 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.549 91.549 25003000 0 25003000 0 0 0 0 0 0 0 0 0 0 0 0 0 34101 4806 31158 286578;286579 226778;226779 226778 6164;6165;6166 2 MACGAEFSMIMDCK 2 Oxidation (M) 1681.6278 0.6278409 4806 Q9P258 RCC2 Protein RCC2 yes yes 0 2 0 By MS/MS 2 0 2 2 70.606 64.884 2 1.2501E-05 85343 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.71 101.71 100100000 0 100100000 0 0 0 0 0 0 0 0 0 0 0 0 0 34102 4806 31158 286580;286581 226780;226781 226781 6164;6165;6166 2 MACGAEFSMIMDCK Oxidation (M) 1665.6329 0.63292628 4806 Q9P258 RCC2 Protein RCC2 yes yes 0 1 0 By MS/MS By MS/MS 2 0 4 3 1 77.898 73.58 2 0.0010993 91404 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.689 86.606 316230000 0 314310000 1919600 0 0 0 0 0 0 0 0 0 0 0 0 34103 4806 31158 286582;286583;286584;286585 226782;226783;226784;226785 226783 6164;6165;6166 3 MACGAEFSMIMDCK Unmodified 1649.638 0.63801166 4806 Q9P258 RCC2 Protein RCC2 yes yes 0 0 0 By MS/MS 2 0 1 1 84.137 79.417 2 0.00082081 98671 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.962 74.962 90687000 0 90687000 0 0 0 0 0 0 0 0 0 0 0 0 0 34104 4806 31158 286586 226786 226786 1 MACGLGGK Unmodified 792.36223 0.36222945 149 O00410 IPO5 Importin-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 15.347 15.535 2 0.03202 15251 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 54.571 38.016 103870000 0 0 0 3007600 3070900 9147500 0 7179700 3313600 8631600 11870000 10119000 8564100 15803000 23166000 34105 149 31159 286587;286588;286589;286590;286591;286592;286593;286594;286595;286596;286597 226787 226787 1 MADCGGLPQISQPAK Unmodified 1571.7436 0.74359766 3632 Q92597 NDRG1 Protein NDRG1 yes yes 0 0 0 By MS/MS 2 0 1 1 62.486 56.593 2 0.00051113 72502 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.53 91.701 112320000 0 112320000 0 0 0 0 0 0 0 0 0 0 0 0 0 34106 3632 31160 286598 226788;226789 226788 2 MADCGGLPQVVQPGK Unmodified 1555.7487 0.74868304 4889 Q9UGV2 NDRG3 Protein NDRG3 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 62.305 61.452 2 0.00029238 69753 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.17 56.841 90409000 0 69856000 0 0 1592000 0 0 0 0 0 4720700 0 3848900 3754800 6636300 34107 4889 31161 286599;286600;286601;286602;286603;286604 226790;226791 226791 2 MADCGGLPQVVQPGK Oxidation (M) 1571.7436 0.74359766 4889 Q9UGV2 NDRG3 Protein NDRG3 yes yes 0 1 0 By MS/MS 2 0 1 1 60.082 54.224 2 5.5571E-06 69796 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.658 66.42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34108 4889 31161 286605 226792 226792 6241 1 MADEDALRK Unmodified 1047.5019 0.50189405 2816 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.989 17.168 2 0.041845 17575 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 83.206 68.542 52037000 0 0 0 2837200 2614300 3194900 3116800 2762000 2871700 3320600 4585700 5443400 6154300 5612800 9523700 34109 2816 31162 286606;286607;286608;286609;286610;286611;286612;286613;286614;286615;286616;286617 226793 226793 1 MADKPDMGEIASFDK Unmodified 1653.7378 0.73784358 1953 P63313 TMSB10 Thymosin beta-10 yes yes 0 0 1 By MS/MS 2 0 1 1 71.641 65.914 3 0.0177 83649 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 38.696 34.148 21848000 0 21848000 0 0 0 0 0 0 0 0 0 0 0 0 0 34110 1953 31163 286618 226794 226794 1 MADLSELLK Oxidation (M) 1034.5318 0.5317972 1282 P30519 HMOX2 Heme oxygenase 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 74.273 74.313 2 0.0098103 85910 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 57.859 38.072 53731000 0 0 0 3586700 3710700 0 5486200 5273800 4002100 6596300 5234400 9448200 6252900 4140000 0 34111 1282 31164 286619;286620;286621;286622;286623;286624;286625;286626;286627;286628 226795;226796;226797;226798;226799;226800;226801;226802 226800 1885 8 MADLSELLK Unmodified 1018.5369 0.53688258 1282 P30519 HMOX2 Heme oxygenase 2 yes yes 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 81.258 81.364 2 0.0079891 93775 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.919 46.287 35124000 0 0 0 0 2891700 0 2519700 4698300 0 0 5990400 5040700 2301700 3688000 7993700 34112 1282 31164 286629;286630;286631;286632;286633;286634;286635;286636 226803 226803 1 MADPQSIQESQNLSMFLANHNK Unmodified 2502.1631 0.1631423 3050 Q7L576 CYFIP1 Cytoplasmic FMR1-interacting protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 86.007 81.233 3 2.9092E-05 100981 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.954 64.066 26338000 0 26338000 0 0 0 0 0 0 0 0 0 0 0 0 0 34113 3050 31165 286637 226804 226804 1 MADSAASLEQQLEQVK Oxidation (M) 1762.8407 0.84072875 2155 Q08378 GOLGA3 Golgin subfamily A member 3 yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 75.756 75.919 2 1.3147E-05 87672 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 75.739 52.134 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34114 2155 31166 286638;286639 226805;226806 226806 3465 2 MADVSAEEK Oxidation (M) 994.42773 0.42772606 4129 Q9BSL1 UBAC1 Ubiquitin-associated domain-containing protein 1 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 8.0637 8.2142 2 0.011606 5820 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.531 16.568 4747600 0 0 0 0 0 663670 580420 0 0 1072600 0 0 0 868930 1562100 34115 4129 31167 286640;286641;286642;286643;286644 226807 226807 5614 1 MAEADRTAIHEVMEQQTISIAK Unmodified 2471.2148 0.21484352 1334 P33993 MCM7 DNA replication licensing factor MCM7 yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 79.034 72.035 3;4 8.3587E-50 93484 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 130.71 117.86 114690000 93755000 20937000 0 0 0 0 0 0 0 0 0 0 0 0 0 34116 1334 31168 286645;286646;286647 226808;226809;226810;226811 226811 4 MAEADRTAIHEVMEQQTISIAK Oxidation (M) 2487.2098 0.20975814 1334 P33993 MCM7 DNA replication licensing factor MCM7 yes yes 0 1 1 By MS/MS 2 0 3 3 72.13 63.893 3;4 3.182E-12 81501 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.755 81.394 50336000 50336000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34117 1334 31168 286648;286649;286650 226812;226813;226814;226815;226816 226813 2008;2009 5 MAEAELVQEGK Oxidation (M) 1219.5755 0.57545293 1310 P31944 CASP14 Caspase-14;Caspase-14 subunit p17, mature form;Caspase-14 subunit p10, mature form;Caspase-14 subunit p20, intermediate form;Caspase-14 subunit p8, intermediate form yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.94 30.131 2 3.046E-11 33201 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 154.85 94.021 394980000 0 0 0 167110000 16189000 17961000 23271000 28174000 9482800 23864000 24803000 36437000 21354000 13766000 12572000 34118 1310 31169 286651;286652;286653;286654;286655;286656;286657;286658;286659;286660;286661;286662 226817;226818;226819;226820;226821;226822;226823;226824;226825;226826;226827;226828;226829;226830 226830 1941 13 MAEAELVQEGK Unmodified 1203.5805 0.58053831 1310 P31944 CASP14 Caspase-14;Caspase-14 subunit p17, mature form;Caspase-14 subunit p10, mature form;Caspase-14 subunit p20, intermediate form;Caspase-14 subunit p8, intermediate form yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.064 40.244 2 1.9374E-05 44727 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 147.2 137.29 775080000 0 0 0 324050000 22296000 34913000 31371000 53347000 15867000 43535000 59972000 96499000 32525000 21542000 39160000 34119 1310 31169 286663;286664;286665;286666;286667;286668;286669;286670;286671;286672;286673;286674 226831;226832;226833;226834;226835;226836;226837;226838;226839;226840;226841 226836 10 MAEALAHGADVNWANSEENK Oxidation (M) 2171.9542 0.95419538 2491 Q15057 ACAP2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 yes yes 0 1 0 By MS/MS 2 0 1 1 56.241 52.389 3 0.00014841 65468 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 50.938 47.497 4603500 0 0 4603500 0 0 0 0 0 0 0 0 0 0 0 0 34120 2491 31170 286675 226842 226842 4097 1 MAEAVQNHVK Unmodified 1125.5601 0.56007764 4532 Q9NNW7 TXNRD2 Thioredoxin reductase 2, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 17.788 15.303 2 0.016359 20277 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.709 49.931 2646400 0 0 2646400 0 0 0 0 0 0 0 0 0 0 0 0 34121 4532 31171 286676;286677 226843;226844 226843 2 MAECYTMLK Oxidation (M) 1161.4868 0.48683762 4944 Q9UJX3 ANAPC7 Anaphase-promoting complex subunit 7 yes yes 0 1 0 By MS/MS 2 0 1 1 43.22 38.072 2 0.013739 49489 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.684 71.821 34348000 0 34348000 0 0 0 0 0 0 0 0 0 0 0 0 0 34122 4944 31172 286678 226845;226846 226846 6289 2 MAEDEAETIGNLIEECGGLEK Oxidation (M) 2323.0196 0.019557332 173 O00629 KPNA4 Importin subunit alpha-3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.14 3.87 5 2 7 1 4 2 2 2 1 2 89.144 87.125 2;3 5.2702E-139 107663 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 211.13 200.4 230000000 12227000 182100000 8769500 0 0 0 0 0 0 8265700 5331800 0 0 1743000 11559000 34123 173 31173 286679;286680;286681;286682;286683;286684;286685;286686;286687;286688;286689;286690;286691;286692 226847;226848;226849;226850;226851;226852;226853;226854;226855 226848 244 7 MAEDEAETIGNLIEECGGLEK Unmodified 2307.0246 0.02464271 173 O00629 KPNA4 Importin subunit alpha-3 yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 92.367 88.302 2;3 1.7912E-44 109730 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 153.23 132.28 230160000 0 230160000 0 0 0 0 0 0 0 0 0 0 0 0 0 34124 173 31173 286693;286694;286695 226856;226857 226856 2 MAEEIGDK Unmodified 891.40078 0.40078303 1498 P46100 ATRX Transcriptional regulator ATRX yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 17.362 17.573 2 0.033014 16440 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.968 39.811 37414000 0 0 0 4615700 1934000 0 2853500 3095200 0 3468500 2695200 5761700 4549300 3771400 4669000 34125 1498 31174 286696;286697;286698;286699;286700;286701;286702;286703;286704;286705 226858;226859 226858 2 MAEELKPMDTDK Unmodified 1406.6422 0.64215228 405 O60502 MGEA5 Protein O-GlcNAcase yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 40.97 36.071 3 5.0601E-07 47061 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.417 83.849 124970000 0 124970000 0 0 0 0 0 0 0 0 0 0 0 0 0 34126 405 31175 286706;286707 226860;226861;226862 226862 3 MAEELKPMDTDK Oxidation (M) 1422.6371 0.63706691 405 O60502 MGEA5 Protein O-GlcNAcase yes yes 0 1 1 By MS/MS 2.5 0.5 1 1 2 28.037 23.742 3 0.022413 31279 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.157 48.011 50267000 0 50267000 0 0 0 0 0 0 0 0 0 0 0 0 0 34127 405 31175 286708;286709 226863 226863 0 MAEELKPMDTDK 2 Oxidation (M) 1438.632 0.63198153 405 O60502 MGEA5 Protein O-GlcNAcase yes yes 0 2 1 By MS/MS 2.5 0.5 1 1 2 19.905 16.232 3 0.04785 20203 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 72.531 65.492 27414000 0 27414000 0 0 0 0 0 0 0 0 0 0 0 0 0 34128 405 31175 286710;286711 226864 226864 1 MAEESSSSSSSSSPTAATSQQQQLK Unmodified 2543.1293 0.12931879 2332 Q13620 CUL4B Cullin-4B yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 30.846 31.14 3 3.577E-06 33840 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 43.176 40.252 18851000 0 0 0 0 0 0 4298400 0 3776600 0 0 0 0 0 10776000 34129 2332 31176 286712;286713;286714 226865;226866 226865 2 MAEFGPDSGGR Oxidation (M) 1138.4713 0.47132221 673 O95619 YEATS4 YEATS domain-containing protein 4 yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 24.253 24.933 2 0.0053591 25900 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 52.278 42.69 5499200 0 0 0 0 0 0 0 0 0 0 0 5499200 0 0 0 34130 673 31177 286715;286716 226867;226868 226868 816 2 MAEIGEHVAPSEAANSLEQAQAAAER Oxidation (M) 2695.2508 0.25077133 1224 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 70.436 70.57 3 3.2238E-93 80659 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 138.62 131.17 192820000 0 0 0 0 8998200 17181000 9744100 10197000 11714000 26116000 18730000 31788000 13856000 14979000 29520000 34131 1224 31178 286717;286718;286719;286720;286721;286722;286723;286724;286725;286726;286727 226869;226870;226871;226872;226873;226874;226875;226876;226877;226878;226879;226880;226881;226882;226883;226884 226873 1796 16 MAEIGEHVAPSEAANSLEQAQAAAER Unmodified 2679.2559 0.25585671 1224 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 0 0 0 By matching By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 73.796 74.038 3 1.3287E-42 84889 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 104.33 94.513 35759000 0 0 0 0 0 0 0 0 0 0 5125000 9554200 0 4526800 16553000 34132 1224 31178 286728;286729;286730;286731 226885;226886 226885 2 MAELPVDPMLSK 2 Oxidation (M) 1361.6571 0.65707407 384 O60231 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 3 9 2 1 1 1 1 1 1 1 1 1 1 65.914 65.172 2 0.00047192 74606 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 67.726 54.372 74354000 0 23916000 2025000 0 4338100 4867300 5712000 3277400 0 4836500 8986000 7852700 4063500 0 4479100 34133 384 31179 286732;286733;286734;286735;286736;286737;286738;286739;286740;286741;286742;286743 226887;226888;226889;226890;226891;226892;226893;226894;226895;226896;226897 226896 492;493 10 MAELPVDPMLSK Oxidation (M) 1345.6622 0.66215945 384 O60231 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 3 1 1 1 1 1 1 1 1 1 1 1 75.971 75.429 2 3.8477E-07 93415 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.52 96.683 325720000 0 280720000 0 2564000 0 3764500 2468200 3230100 3607000 4089100 5255700 4509500 2533700 3856600 9121100 34134 384 31179 286744;286745;286746;286747;286748;286749;286750;286751;286752;286753;286754;286755;286756;286757 226898;226899;226900;226901;226902;226903;226904;226905;226906;226907;226908;226909;226910 226900 492;493 13 MAEMRPPLIETSINQPK Unmodified 1954.0016 0.0016032645 3976 Q96RT1 ERBB2IP Protein LAP2 yes yes 0 0 1 By MS/MS 2 0 1 1 80.035 71.904 3 5.4996E-05 94382 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.99 82.525 11119000 11119000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34135 3976 31180 286758 226911 226911 1 MAEPFTK Oxidation (M) 838.38949 0.38949006 4491 Q9HAV4 XPO5 Exportin-5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.18 3.74 3 1 7 1 2 1 1 1 1 1 1 1 1 22.197 20.928 2 0.027309 26513 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.369 48.449 279430000 12141000 187880000 9108100 0 7192600 0 8777700 0 0 0 11115000 12159000 9345000 9388700 12319000 34136 4491 31181 286759;286760;286761;286762;286763;286764;286765;286766;286767;286768;286769 226912;226913;226914;226915;226916 226912 5 MAEPFTK Unmodified 822.39458 0.39457544 4491 Q9HAV4 XPO5 Exportin-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 38.478 33.487 2 0.027336 43942 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.602 62.401 451390000 3758900 436770000 10861000 0 0 0 0 0 0 0 0 0 0 0 0 34137 4491 31181 286770;286771;286772 226917;226918 226917 2 MAEQWLQEK Unmodified 1161.5488 0.54884425 3038 Q7KZ85 SUPT6H Transcription elongation factor SPT6 yes yes 0 0 0 By MS/MS 2 0 1 1 58.64 52.809 2 0.0072799 68113 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.72 92.763 43868000 0 43868000 0 0 0 0 0 0 0 0 0 0 0 0 0 34138 3038 31182 286773 226919 226919 1 MAESQEAELER Unmodified 1291.5714 0.57143018 4077 Q99996 AKAP9 A-kinase anchor protein 9 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 29.195 29.506 2 0.03014 31620 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 38.75 27.599 5959400 0 0 0 0 0 0 0 0 0 2322000 3637400 0 0 0 0 34139 4077 31183 286774;286775 226920 226920 1 MAFRPGVVDLPEENR Unmodified 1728.8617 0.86173896 382 O60216 RAD21 Double-strand-break repair protein rad21 homolog yes yes 0 0 1 By matching By matching By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 72.19 72.354 3 0.035724 83323 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 27.85 16.795 22972000 0 0 0 0 0 3839200 0 0 2493000 3235400 7682200 5722300 0 0 0 34140 382 31184 286776;286777;286778;286779;286780 226921 226921 1 MAFRYPEPEDK Unmodified 1381.6336 0.63363651 1154 P23368 ME2 NAD-dependent malic enzyme, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 50.6 50.638 3 0.00020025 57310 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 82.278 57.986 153220000 0 0 0 0 23649000 11142000 36445000 32886000 0 0 49101000 0 0 0 0 34141 1154 31185 286781;286782;286783;286784;286785 226922;226923;226924;226925;226926;226927;226928 226925 7 MAGAEGAAGR Unmodified 889.4076 0.40759974 3367 Q8N806 UBR7 Putative E3 ubiquitin-protein ligase UBR7 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 30.075 30.281 2 0.017798 33015 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 48.756 17.466 74598000 0 0 0 17141000 4663900 0 5703900 8591600 0 9304900 6529700 9458000 9913100 0 3291400 34142 3367 31186 286786;286787;286788;286789;286790;286791;286792;286793;286794 226929;226930;226931;226932;226933;226934;226935 226934 7 MAGAIAQGLIR Unmodified 1099.6172 0.61719858 2705 Q53H96 PYCRL Pyrroline-5-carboxylate reductase 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 66.222 66.237 2 0.00055119 75524 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 81.548 65.215 173490000 0 0 0 8687400 13271000 20459000 19996000 28036000 16947000 18166000 22530000 25397000 0 0 0 34143 2705 31187 286795;286796;286797;286798;286799;286800;286801;286802;286803 226936;226937;226938;226939;226940;226941;226942;226943;226944;226945 226942 9 MAGAIAQGLIR Oxidation (M) 1115.6121 0.61211321 2705 Q53H96 PYCRL Pyrroline-5-carboxylate reductase 3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 57.025 57.147 2 1.8626E-05 64772 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 119.29 104.52 129360000 0 0 0 8575000 9618400 11517000 17645000 14529000 11463000 9140800 11379000 16390000 5146400 6579900 7374100 34144 2705 31187 286804;286805;286806;286807;286808;286809;286810;286811;286812;286813;286814;286815 226946;226947;226948;226949;226950;226951;226952;226953;226954;226955;226956;226957;226958;226959;226960 226952 4357 14 MAGAMSTTAK Unmodified 967.44669 0.44668736 5072 Q9UQN3 CHMP2B Charged multivesicular body protein 2b yes yes 0 0 0 By MS/MS 2 0 1 1 16.512 13.138 2 0.029238 17512 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.615 72.421 25764000 0 25764000 0 0 0 0 0 0 0 0 0 0 0 0 0 34145 5072 31188 286816 226961 226961 0 MAGATPVFIPLR Oxidation (M) 1287.7009 0.70092821 2998 Q6YP21 CCBL2 Kynurenine--oxoglutarate transaminase 3 yes yes 0 1 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 80.507 80.536 2 1.4379E-06 93195 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 113.71 92.259 30209000 0 0 0 1590200 674860 0 0 1052400 0 0 5508700 5581500 0 2902300 12899000 34146 2998 31189 286817;286818;286819;286820;286821;286822;286823 226962;226963;226964;226965;226966 226963 4614 5 MAGCSLSFRSEL Unmodified 1356.6166 0.61660624 907;1617 P0DMM9;P0DMN0;P50226;P50225 SULT1A3;SULT1A4;SULT1A2;SULT1A1 Sulfotransferase 1A3;Sulfotransferase 1A4;Sulfotransferase 1A2;Sulfotransferase 1A1 no no 0 0 1 By MS/MS 2 0 1 1 79.347 71.216 2 0.017912 93444 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.573 85.341 183310000 183310000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34147 907;1617 31190 286824 226967 226967 1 MAGCSLSFRSEL Oxidation (M) 1372.6115 0.61152086 907;1617 P0DMM9;P0DMN0;P50226;P50225 SULT1A3;SULT1A4;SULT1A2;SULT1A1 Sulfotransferase 1A3;Sulfotransferase 1A4;Sulfotransferase 1A2;Sulfotransferase 1A1 no no 0 1 1 By MS/MS 2 0 1 1 75.527 67.397 2 0.0017921 89241 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.456 77.67 127580000 127580000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34148 907;1617 31190 286825 226968 226968 1166 0 MAGDETQPTR Unmodified 1104.487 0.48697227 3583 Q8WXA9 SREK1 Splicing regulatory glutamine/lysine-rich protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 10.554 10.655 2 0.0035119 9412 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 76.221 62.219 50957000 0 0 0 2979200 3134900 4554200 4933100 4241600 4178000 5992700 8202500 0 6387900 6353400 0 34149 3583 31191 286826;286827;286828;286829;286830;286831;286832;286833;286834;286835 226969;226970;226971;226972;226973;226974;226975 226974 7 MAGDETQPTR Oxidation (M) 1120.4819 0.48188689 3583 Q8WXA9 SREK1 Splicing regulatory glutamine/lysine-rich protein 1 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 6.81 6.7833 2 0.002853 4611 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 73.233 58.564 12462000 0 0 0 2617200 3263300 3275500 0 0 3306100 0 0 0 0 0 0 34150 3583 31191 286836;286837;286838;286839 226976;226977;226978 226978 5084 3 MAGDPVANVR Oxidation (M) 1044.5022 0.50222841 1271 P30153 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 26.791 27.078 2 0.00093934 29078 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 91.853 58.591 142310000 0 0 0 10258000 0 19142000 0 0 8633600 14248000 17141000 27563000 14220000 11053000 20049000 34151 1271 31192 286840;286841;286842;286843;286844;286845;286846;286847;286848;286849 226979;226980;226981;226982;226983;226984;226985;226986;226987 226987 1875 9 MAGDQVANVR Oxidation (M) 1075.508 0.50804206 1272 P30154 PPP2R1B Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 19.038 19.274 2 0.0067371 19404 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 56.378 35.753 29614000 0 0 0 0 0 4926400 0 2269100 2387600 4650700 0 7041500 4254900 4083400 0 34152 1272 31193 286850;286851;286852;286853;286854;286855;286856 226988;226989;226990;226991 226991 1881 4 MAGDQVANVR Unmodified 1059.5131 0.51312744 1272 P30154 PPP2R1B Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 26.535 26.775 2 0.0056189 28653 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 68.224 39.711 9244200 0 0 0 0 0 0 0 0 0 4917500 0 0 0 4326700 0 34153 1272 31193 286857;286858;286859;286860 226992;226993;226994 226992 3 MAGNEALSPTSPFR Oxidation (M) 1492.698 0.69802768 3186 Q86WR7 PROSER2 Proline and serine-rich protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 58.157 58.272 2 0.00025962 67365 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 72.34 55.314 57502000 0 0 0 6026600 0 8243900 0 0 6454500 8854900 9917200 11108000 0 6896400 0 34154 3186 31194 286861;286862;286863;286864;286865;286866;286867 226995;226996;226997;226998;226999;227000 227000 4813 6 MAGNEALSPTSPFR Unmodified 1476.7031 0.70311306 3186 Q86WR7 PROSER2 Proline and serine-rich protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 63.916 64.176 2 0.0015631 73437 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 57.225 28.827 56378000 0 0 0 0 0 0 0 0 5695500 11341000 8759200 0 6714700 7506600 16361000 34155 3186 31194 286868;286869;286870;286871;286872;286873;286874;286875;286876 227001;227002;227003;227004;227005;227006;227007;227008 227005 8 MAGRAVLLAGPPGTGK Unmodified 1494.8341 0.83406765 5086 Q9Y265 RUVBL1 RuvB-like 1 yes yes 0 0 1 By MS/MS 2 0 1 1 65.52 57.232 3 0.010394 76932 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 41.088 29.818 8183800 8183800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34156 5086 31195 286877 227009 227009 1 MAIESAGFK Unmodified 952.4688 0.46880301 841 P07384 CAPN1 Calpain-1 catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 47.582 47.693 2 0.0051115 53548 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 83.265 56.663 90677000 0 0 0 0 0 0 34631000 0 0 56046000 0 0 0 0 0 34157 841 31196 286878;286879;286880 227010;227011;227012 227011 3 MAIESAGFK Oxidation (M) 968.46372 0.46371763 841 P07384 CAPN1 Calpain-1 catalytic subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 9 2 1 1 1 1 1 1 1 32.067 32.18 2 0.0034624 35565 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 78.77 59.41 181960000 0 0 0 83438000 10179000 0 17731000 11457000 10693000 0 0 0 17161000 12352000 18946000 34158 841 31196 286881;286882;286883;286884;286885;286886;286887;286888;286889 227013;227014;227015;227016;227017 227017 1033 5 MAILQIMK 2 Oxidation (M) 978.52421 0.5242094 2262 Q13263 TRIM28 Transcription intermediary factor 1-beta yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50.215 49.183 2 0.0022176 55140 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 94.163 46.42 442500000 68206000 12121000 26029000 0 20029000 28999000 30555000 17237000 20520000 37311000 33382000 37501000 39881000 23396000 47331000 34159 2262 31197 286890;286891;286892;286893;286894;286895;286896;286897;286898;286899;286900;286901;286902;286903 227018;227019;227020;227021;227022;227023;227024;227025;227026;227027;227028;227029 227019 3686;3687 8 MAILQIMK Oxidation (M) 962.52929 0.52929478 2262 Q13263 TRIM28 Transcription intermediary factor 1-beta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 4 24 1 1 2 2 2 2 2 2 2 2 2 2 2 2 2 66.46 65.818 2 0.0043569 72560 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 99.384 46.747 707400000 112370000 51733000 14631000 26044000 29658000 49981000 38387000 28325000 29076000 53601000 52385000 71222000 40656000 43694000 65634000 34160 2262 31197 286904;286905;286906;286907;286908;286909;286910;286911;286912;286913;286914;286915;286916;286917;286918;286919;286920;286921;286922;286923;286924;286925;286926;286927;286928;286929;286930;286931 227030;227031;227032;227033;227034;227035;227036;227037;227038;227039;227040;227041;227042;227043;227044;227045;227046;227047;227048;227049;227050;227051;227052;227053;227054;227055;227056 227051 3686;3687 24 MAILQIMK Unmodified 946.53438 0.53438016 2262 Q13263 TRIM28 Transcription intermediary factor 1-beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 80.82 79.702 2 0.0058676 91281 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 105.2 81.343 735580000 163880000 29752000 7418700 20262000 22054000 44927000 23932000 38548000 23512000 57085000 41444000 64664000 31553000 48186000 118370000 34161 2262 31197 286932;286933;286934;286935;286936;286937;286938;286939;286940;286941;286942;286943;286944;286945;286946;286947 227057;227058;227059;227060;227061;227062;227063;227064;227065;227066;227067;227068;227069;227070;227071;227072;227073 227061 17 MAIMVQSPMFDGK 3 Oxidation (M) 1501.6615 0.66150752 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 3 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 56.974 57.276 2 0.00012424 64965 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 83.883 67.992 42538000 0 0 0 0 0 4715700 6008000 0 0 8539800 5609200 7199400 3637000 0 6828700 34162 894 31198 286948;286949;286950;286951;286952;286953;286954;286955;286956;286957 227074;227075;227076;227077;227078;227079;227080;227081;227082;227083;227084;227085 227080 1151;1152;1153 12 MAIMVQSPMFDGK 2 Oxidation (M) 1485.6666 0.6665929 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 2 0 By MS/MS 10 0 1 1 68.056 68.019 2 0.013539 78207 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 47.844 42.503 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34163 894 31198 286958 227086 227086 1151;1152;1153 1 MAIQQADK Oxidation (M) 919.44332 0.44331654 2465 Q14CX7 NAA25 N-alpha-acetyltransferase 25, NatB auxiliary subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 6.8682 7.0436 2 0.0032236 4742 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 114.19 87.065 291890000 0 0 0 0 0 0 90851000 88871000 105480000 5310200 0 0 0 0 1370700 34164 2465 31199 286959;286960;286961;286962;286963 227087;227088;227089;227090 227089 4060 4 MAIQQADK Unmodified 903.4484 0.44840192 2465 Q14CX7 NAA25 N-alpha-acetyltransferase 25, NatB auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 7 3.69 1 1 3 2 1 1 1 17.838 16.446 2 0.0043522 16771 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 111.01 84.899 860480000 0 137770000 0 0 0 0 240820000 234910000 246980000 0 0 0 0 0 0 34165 2465 31199 286964;286965;286966;286967;286968 227091;227092;227093;227094;227095 227091 5 MAKPEEVLVVENDQGEVVR Unmodified 2140.0834 0.083418639 237 O14980 XPO1 Exportin-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 68.187 68.455 3 1.8043E-17 77828 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.814 81.354 33803000 0 0 0 0 0 4399700 0 0 0 0 5191900 4736200 0 4488200 14987000 34166 237 31200 286969;286970;286971;286972;286973 227096;227097;227098;227099;227100 227097 5 MAKPEEVLVVENDQGEVVR Oxidation (M) 2156.0783 0.078333261 237 O14980 XPO1 Exportin-1 yes yes 0 1 1 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 63.019 63.201 3 1.1183E-37 71317 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 118.72 102.03 38019000 0 0 0 0 0 0 0 10983000 0 0 0 0 12301000 14735000 0 34167 237 31200 286974;286975;286976;286977 227101;227102;227103;227104 227101 318 4 MALDIEIATYRK Oxidation (M) 1438.749 0.74900062 870 P08670;P41219 VIM;PRPH Vimentin;Peripherin yes no 0 1 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 66.407 66.389 3 0.003297 76027 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 43.991 8.7875 59448000 0 0 0 2038100 3174000 11215000 6798600 4205800 0 12319000 0 11947000 0 7750600 0 34168 870 31201 286978;286979;286980;286981;286982;286983;286984;286985 227105 227105 1121 1 MALDIEIATYRK Unmodified 1422.7541 0.754086 870 P08670;P41219 VIM;PRPH Vimentin;Peripherin yes no 0 0 1 By MS/MS 2 0 1 1 82.16 74.029 3 0.0069641 96813 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.557 24.933 31483000 31483000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34169 870 31201 286986 227106;227107 227106 2 MALDNLLANLPPAK Oxidation (M) 1495.8068 0.80684985 2463 Q14C86 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 86.48 86.559 2 0.00068077 100239 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 61.65 55.117 5412900 0 0 0 0 0 2306700 0 0 0 3106100 0 0 0 0 0 34170 2463 31202 286987;286988;286989 227108;227109;227110 227109 4054 3 MALFAGGK Unmodified 793.41565 0.41564523 3125 Q7Z7H5 TMED4 Transmembrane emp24 domain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching 10 0 8 1 1 1 1 1 1 1 1 48.846 48.945 2 0.034341 56187 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 53.163 33.281 69206000 0 0 0 4944600 6959800 0 5892500 7190000 0 0 12777000 0 8597400 7475300 15370000 34171 3125 31203 286990;286991;286992;286993;286994;286995;286996;286997 227111;227112 227111 2 MALLFAR Acetyl (Protein N-term);Oxidation (M) 878.46841 0.46840908 3571 Q8WW59 SPRYD4 SPRY domain-containing protein 4 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 82.539 82.72 2 0.0099133 95381 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 49.312 8.391 10000000 0 0 0 0 0 0 3053100 4346000 2601000 0 0 0 0 0 0 34172 3571 31204 286998;286999;287000 227113 227113 5059 1 MALNHPYFNDLDNQIK Unmodified 1931.92 0.91998213 822 P06493 CDK1 Cyclin-dependent kinase 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.54 3.69 4 9 2 1 1 1 1 1 1 1 1 1 1 1 76.302 74.601 2;3 6.7215E-24 85846 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 97.235 86.896 1118400000 573460000 412880000 12906000 0 0 14626000 0 5802300 6585000 7899400 5170900 6707700 3054500 7367000 61966000 34173 822 31205 287001;287002;287003;287004;287005;287006;287007;287008;287009;287010;287011;287012;287013 227114;227115;227116;227117;227118;227119;227120;227121 227116 6 MALNHPYFNDLDNQIK Oxidation (M) 1947.9149 0.91489675 822 P06493 CDK1 Cyclin-dependent kinase 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 7.91 3.42 4 2 16 2 2 2 1 1 2 2 2 2 1 2 1 1 1 70.123 68.979 2;3 0.00049428 78659 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 58.676 35.441 965970000 330800000 180890000 49234000 13130000 18649000 77514000 30390000 37184000 52779000 58313000 58851000 7600500 0 39833000 10798000 34174 822 31205 287014;287015;287016;287017;287018;287019;287020;287021;287022;287023;287024;287025;287026;287027;287028;287029;287030;287031;287032;287033;287034;287035 227122;227123;227124;227125;227126;227127 227126 986 4 MALPELVR Oxidation (M) 943.51609 0.51608756 1488 P45974 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 59.734 59.899 2 0.0073199 67491 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.674 31.956 68476000 0 0 0 5587000 0 9072600 4776700 0 2327000 6373200 8357000 7793700 4413800 7824100 11951000 34175 1488 31206 287036;287037;287038;287039;287040;287041;287042;287043;287044;287045 227128;227129;227130 227129 2336 3 MALPELVR Unmodified 927.52117 0.52117293 1488 P45974 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.325 75.384 2 0.0074646 86903 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 89.55 49.447 168550000 0 0 0 5283400 4507100 16983000 8025700 6784800 4864200 14090000 16279000 18215000 7613700 15586000 50316000 34176 1488 31206 287046;287047;287048;287049;287050;287051;287052;287053;287054;287055;287056;287057 227131;227132;227133;227134;227135;227136;227137;227138;227139;227140;227141 227136 11 MALQLDPPQK Unmodified 1139.6009 0.60087982 2631 Q16760 DGKD Diacylglycerol kinase delta yes yes 0 0 0 By MS/MS 2 0 1 1 66.154 60.237 2 0.024358 77102 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.494 32.67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34177 2631 31207 287058 227142 227142 1 MALSFVQR Unmodified 950.50077 0.50077184 2232 Q13098 GPS1 COP9 signalosome complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 64.166 64.241 2 0.0063409 73670 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 101.69 71.884 161180000 0 0 0 4898000 6908200 17354000 8860800 0 0 18931000 19137000 16248000 12950000 15686000 40206000 34178 2232 31208 287059;287060;287061;287062;287063;287064;287065;287066;287067;287068 227143;227144;227145;227146;227147;227148;227149;227150;227151;227152 227150 10 MALSFVQR Oxidation (M) 966.49569 0.49568646 2232 Q13098 GPS1 COP9 signalosome complex subunit 1 yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 49.547 49.687 2 0.033555 55169 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 75.972 52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34179 2232 31208 287069;287070 227153;227154 227154 2 MANGFATTEELAGKAGVLVSHEVTK Unmodified 2559.3003 0.30028771 3436 Q8NEZ4 KMT2C Histone-lysine N-methyltransferase 2C yes yes 0 0 1 By MS/MS By matching 10 0 2 1 1 76.173 76.03 3 0.03842 88119 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 11.853 3.9556 6441200 0 0 0 2641100 0 0 0 0 0 0 3800100 0 0 0 0 34180 3436 31209 287071;287072 227155 227155 1 MANITSSQILDQLK Oxidation (M) 1576.8131 0.81305744 2779 Q5T6F2 UBAP2 Ubiquitin-associated protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 78.424 78.117 2 2.0575E-32 90232 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 158.3 105.06 363210000 0 32392000 0 15327000 17260000 24293000 26947000 22113000 26126000 40074000 31561000 38118000 28386000 26582000 34035000 34181 2779 31210 287073;287074;287075;287076;287077;287078;287079;287080;287081;287082;287083;287084;287085 227156;227157;227158;227159;227160;227161;227162;227163;227164;227165;227166;227167;227168;227169;227170 227157 4420 15 MANITSSQILDQLK Unmodified 1560.8181 0.81814282 2779 Q5T6F2 UBAP2 Ubiquitin-associated protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 81.978 81.675 2 4.5539E-34 101380 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 156.58 129.47 158980000 0 70161000 0 0 4014300 4466800 3051500 7337900 4338700 8795800 7467400 7620100 3238600 9986000 28498000 34182 2779 31210 287086;287087;287088;287089;287090;287091;287092;287093;287094;287095;287096;287097 227171;227172;227173;227174;227175;227176;227177;227178;227179;227180 227173 10 MANRDLLSSVSR Unmodified 1347.6929 0.69288272 1100 P20073 ANXA7 Annexin A7 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 47.267 47.565 3 0.0059478 52497 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.293 30.683 83192000 0 0 0 0 0 15094000 0 0 0 25131000 0 0 0 11733000 31235000 34183 1100 31211 287098;287099;287100;287101 227181;227182 227182 2 MANSVTDLR Oxidation (M) 1021.4862 0.48624399 2831 Q5VZE5 NAA35 N-alpha-acetyltransferase 35, NatC auxiliary subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 26.637 26.758 2 0.0024087 28923 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 89.355 57.419 135290000 0 0 0 6246900 9433200 10367000 0 0 0 27178000 31249000 50813000 0 0 0 34184 2831 31212 287102;287103;287104;287105;287106;287107 227183;227184;227185;227186;227187;227188 227183 4485 6 MANSVTDLR Unmodified 1005.4913 0.49132937 2831 Q5VZE5 NAA35 N-alpha-acetyltransferase 35, NatC auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 35.517 35.674 2 1.7263E-08 38680 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 158.56 121.59 275020000 0 0 0 6783700 12973000 12311000 4527800 3964100 0 47698000 73362000 109290000 0 0 4109300 34185 2831 31212 287108;287109;287110;287111;287112;287113;287114;287115;287116 227189;227190;227191;227192;227193;227194;227195 227191 5 MANVLDEPGQDLEADFPK Oxidation (M) 2003.9146 0.91462198 2390 Q14202 ZMYM3 Zinc finger MYM-type protein 3 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 81.941 80.755 2 1.1001E-32 99391 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 137.81 126.19 94229000 0 80304000 0 0 3743200 0 4358700 0 0 5823000 0 0 0 0 0 34186 2390 31213 287117;287118;287119;287120;287121 227196;227197;227198;227199;227200 227198 3884 4 MANVLDEPGQDLEADFPK Unmodified 1987.9197 0.91970735 2390 Q14202 ZMYM3 Zinc finger MYM-type protein 3 yes yes 0 0 0 By MS/MS 2 0 1 1 87.608 82.8 2 2.481E-05 102929 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.859 72.574 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34187 2390 31213 287122 227201 227201 1 MAPAEILNGK Acetyl (Protein N-term) 1084.5587 0.55868065 953 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 1 0 0 By MS/MS 1 0 1 1 105.41 110.67 2 0.00067795 91141 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 99.755 56.755 20670000 20670000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34188 953 31214 287123 227202 227202 1 MAPALSGANLTSPR Unmodified 1384.7133 0.71328381 5066 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.623 59.733 2 2.1008E-14 68055 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 117.14 101.6 172130000 0 0 0 10322000 10778000 9358900 10414000 10305000 8631700 12927000 19649000 20052000 16517000 18631000 24546000 34189 5066 31215 287124;287125;287126;287127;287128;287129;287130;287131;287132;287133;287134;287135 227203;227204;227205;227206;227207;227208;227209;227210;227211;227212;227213;227214;227215 227205 13 MAPALSGANLTSPR Oxidation (M) 1400.7082 0.70819844 5066 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 51.987 52.206 2 2.1184E-16 57940 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 118.9 108.1 111170000 0 0 0 0 11965000 0 2516100 13828000 0 13461000 0 15892000 14659000 16919000 21924000 34190 5066 31215 287136;287137;287138;287139;287140;287141;287142;287143;287144;287145 227216;227217;227218;227219;227220;227221;227222;227223;227224 227217 6421 9 MAPDSDPFPEGPLLK Acetyl (Protein N-term);Oxidation (M) 1670.7862 0.78617399 4196 Q9BVQ7 SPATA5L1 Spermatogenesis-associated protein 5-like protein 1 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 87.798 87.931 2 0.00017484 101908 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 54.471 47.583 10037000 0 0 0 0 0 2187500 0 0 0 0 2093500 2970900 0 0 2785200 34191 4196 31216 287146;287147;287148;287149 227225;227226;227227;227228 227225 5674 4 MAPGQLALFSVSDK Oxidation (M) 1478.7439 0.74391524 1307 P31939 ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 83.528 78.868 2 6.8909E-06 100228 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 102.4 75.727 65479000 28011000 31582000 5885900 0 0 0 0 0 0 0 0 0 0 0 0 34192 1307 31217 287150;287151;287152;287153 227229;227230;227231;227232;227233 227231 1928 5 MAPGQLALFSVSDK Unmodified 1462.749 0.74900062 1307 P31939 ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 87.459 82.802 2 0.001773 104103 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.451 53.253 120840000 56126000 58996000 5718300 0 0 0 0 0 0 0 0 0 0 0 0 34193 1307 31217 287154;287155;287156;287157 227234;227235;227236;227237 227234 4 MAPGQLALFSVSDK Acetyl (Protein N-term);Oxidation (M) 1520.7545 0.75447993 1307 P31939 ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes yes 1 1 0 By MS/MS By MS/MS By MS/MS 6.25 3.77 1 1 2 2 1 1 90.066 88.122 2 8.9665E-15 107798 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.74 99.506 68797000 0 59475000 0 0 0 0 0 0 0 0 2958200 0 0 0 6363600 34194 1307 31217 287158;287159;287160;287161 227238;227239;227240 227238 1928 3 MAPGQLALFSVSDK Acetyl (Protein N-term) 1504.7596 0.7595653 1307 P31939 ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes yes 1 0 0 By MS/MS 2.5 0.5 1 1 2 96.825 92.799 2 7.1921E-31 114479 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 146.16 115.6 199930000 0 199930000 0 0 0 0 0 0 0 0 0 0 0 0 0 34195 1307 31217 287162;287163 227241;227242 227241 2 MAPIGLK Acetyl (Protein N-term);Oxidation (M) 786.43096 0.43096094 1857 P61764 STXBP1 Syntaxin-binding protein 1 yes yes 1 1 0 By MS/MS 2 0 1 1 83.788 79.068 1 0.017994 98167 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 42.773 9.0349 71405000 0 71405000 0 0 0 0 0 0 0 0 0 0 0 0 0 34196 1857 31218 287164 227243 227243 3013 1 MAPQENQLQEK Unmodified 1314.6238 0.6238001 2287 Q13426 XRCC4 DNA repair protein XRCC4 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 24.791 25.018 2 0.0016293 26078 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 71.451 53.631 13019000 0 0 0 0 1018500 1147500 0 0 0 0 2837700 0 0 2218800 5796700 34197 2287 31219 287165;287166;287167;287168;287169 227244;227245;227246 227245 3 MAPSVEK Unmodified 760.37893 0.37892537 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 13.352 13.462 2 0.026237 11834 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 79.146 56.109 68398000 0 0 0 0 7301300 11280000 8972100 0 7386600 0 0 12106000 10526000 10826000 0 34198 2392 31220 287170;287171;287172;287173;287174;287175;287176 227247 227247 1 MAPSVPAAEPEYPK Acetyl (Protein N-term) 1527.7279 0.72793082 1748 P54819 AK2 Adenylate kinase 2, mitochondrial;Adenylate kinase 2, mitochondrial, N-terminally processed yes yes 1 0 0 By MS/MS 1 0 1 1 103.54 104.43 2 0.0030275 95902 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 53.211 42.979 8506300 0 8506300 0 0 0 0 0 0 0 0 0 0 0 0 0 34199 1748 31221 287177 227248 227248 1 MAPTPIPTR Oxidation (M) 998.5219 0.52190122 2621 Q16643 DBN1 Drebrin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 33.747 33.936 2 0.028264 37370 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 43.808 23.287 31206000 0 0 0 0 3351000 2149500 2978700 1915500 2490100 3775800 0 8458100 0 0 6087500 34200 2621 31222 287178;287179;287180;287181;287182;287183;287184;287185 227249;227250 227249 4278 2 MAPTPIPTRSPSDSSTASTPVAEQIER Unmodified 2825.3865 0.38653653 2621 Q16643 DBN1 Drebrin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.094 67.175 3 2.8873E-18 76361 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.329 46.169 74896000 0 0 0 2649400 2741000 4241300 2894200 4304600 3389000 8635900 9847600 10497000 6026400 4956000 14714000 34201 2621 31223 287186;287187;287188;287189;287190;287191;287192;287193;287194;287195;287196;287197 227251;227252;227253;227254;227255;227256;227257;227258;227259 227253 9 MAPTPIPTRSPSDSSTASTPVAEQIER Oxidation (M) 2841.3815 0.38145115 2621 Q16643 DBN1 Drebrin yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 63.214 63.398 3 6.3424E-36 72442 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 84.933 78.966 88099000 0 0 0 0 5178800 0 10145000 0 8668000 10368000 13369000 15481000 9485400 7640800 7763100 34202 2621 31223 287198;287199;287200;287201;287202;287203;287204;287205;287206 227260;227261;227262;227263;227264;227265;227266;227267;227268;227269;227270 227265 4278 11 MAPVPLDDSNRPASLTK Unmodified 1810.9247 0.92473315 4742 Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 57.828 57.943 3 0.00027156 65855 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 60.209 54.082 314670000 0 0 0 15076000 18406000 20338000 14675000 19497000 12298000 25769000 26826000 43933000 32550000 37002000 48304000 34203 4742 31224 287207;287208;287209;287210;287211;287212;287213;287214;287215;287216;287217;287218 227271;227272;227273;227274;227275;227276;227277;227278;227279;227280;227281;227282 227277 12 MAPVPLDDSNRPASLTK Oxidation (M) 1826.9196 0.91964777 4742 Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 2 1 1 1 1 1 51.419 50.825 3 8.2154E-05 56433 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 65.107 46.969 304560000 0 41408000 0 18255000 20275000 0 17920000 24937000 0 38011000 0 40730000 61711000 41316000 0 34204 4742 31224 287219;287220;287221;287222;287223;287224;287225;287226;287227;287228;287229;287230 227283;227284;227285;227286;227287;227288;227289;227290;227291;227292;227293;227294;227295;227296;227297 227294 6117 14 MAPYQGPDAVPGALDYK Oxidation (M) 1807.8451 0.84508585 356 O43707 ACTN4 Alpha-actinin-4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.91 3.42 2 1 8 2 1 1 1 1 1 1 1 1 1 71.125 70.119 2 8.9747E-61 80704 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 168.61 147.83 1437600000 0 1020700000 8872600 0 13072000 35387000 23045000 20092000 0 0 64098000 85144000 0 53526000 113610000 34205 356 31225 287231;287232;287233;287234;287235;287236;287237;287238;287239;287240;287241 227298;227299;227300;227301;227302;227303;227304;227305;227306;227307 227306 450 10 MAPYQGPDAVPGALDYK Unmodified 1791.8502 0.85017123 356 O43707 ACTN4 Alpha-actinin-4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 4 1 1 1 1 1 1 1 1 1 1 1 1 1 75.367 74.278 2;3 1.2843E-12 91493 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.09 116.89 3712900000 0 3124000000 8975600 13475000 10046000 28406000 11139000 20128000 8234200 33686000 80668000 68858000 17964000 73089000 214220000 34206 356 31225 287242;287243;287244;287245;287246;287247;287248;287249;287250;287251;287252;287253;287254;287255;287256;287257;287258 227308;227309;227310;227311;227312;227313;227314;227315;227316;227317;227318;227319;227320 227312 13 MAPYTGPDSVPGALDYMSFSTALYGESDL Unmodified 3054.3515 0.35145616 971 P12814 ACTN1 Alpha-actinin-1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 100.45 95.028 3 0.02007 119099 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 19.248 17.082 48429000 10322000 38107000 0 0 0 0 0 0 0 0 0 0 0 0 0 34207 971 31226 287259;287260;287261 227321;227322 227322 2 MAQELYMEQK Oxidation (M) 1285.5683 0.56825906 1776 P55884 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.3 3.22 4 1 18 1 4 1 2 1 2 1 2 2 1 1 1 2 2 34.71 34.083 2 9.8023E-06 44574 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 135.43 96.124 193730000 4372000 90118000 0 3652900 6173700 4421700 8894500 3494000 7333100 10354000 7392800 8452300 6128400 12496000 20442000 34208 1776 31227 287262;287263;287264;287265;287266;287267;287268;287269;287270;287271;287272;287273;287274;287275;287276;287277;287278;287279;287280;287281;287282;287283;287284 227323;227324;227325;227326;227327;227328;227329;227330;227331;227332;227333;227334;227335;227336;227337;227338;227339;227340;227341 227327 2896;2897 19 MAQELYMEQK Unmodified 1269.5733 0.57334444 1776 P55884 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 44.607 43.812 2 2.9297E-11 55646 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 178.22 142.78 806530000 0 670610000 2780100 0 5667200 9762300 16932000 0 8189500 0 17846000 0 20351000 15153000 39239000 34209 1776 31227 287285;287286;287287;287288;287289;287290;287291;287292;287293;287294;287295 227342;227343;227344;227345;227346;227347;227348;227349;227350;227351;227352 227345 11 MAQELYMEQK 2 Oxidation (M) 1301.5632 0.56317368 1776 P55884 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 0 2 0 By MS/MS By MS/MS 2 0 2 1 1 26.544 22.911 2 0.0016425 29867 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.11 82.946 26129000 0 24769000 1360200 0 0 0 0 0 0 0 0 0 0 0 0 34210 1776 31227 287296;287297 227353;227354 227353 2896;2897 2 MAQEVLTHLK Unmodified 1168.6274 0.62742892 237 O14980 XPO1 Exportin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 1 2 2 2 2 2 2 48.498 48.658 2;3 0.0028317 54137 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 91.867 73.831 553300000 0 0 0 26699000 20181000 72238000 27834000 30950000 15068000 44334000 55872000 49921000 34929000 55492000 119780000 34211 237 31228 287298;287299;287300;287301;287302;287303;287304;287305;287306;287307;287308;287309;287310;287311;287312;287313;287314;287315;287316;287317;287318;287319;287320 227355;227356;227357;227358;227359;227360;227361;227362;227363;227364;227365;227366;227367;227368;227369;227370;227371 227368 16 MAQEVLTHLK Oxidation (M) 1184.6223 0.62234354 237 O14980 XPO1 Exportin-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 21 2 2 1 2 2 2 2 2 2 2 1 1 38.278 38.433 2;3 0.0034019 42373 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 70.056 45.902 193270000 0 0 0 13867000 9907800 8175100 17468000 13610000 9976600 21860000 26173000 30704000 21890000 14628000 5012900 34212 237 31228 287321;287322;287323;287324;287325;287326;287327;287328;287329;287330;287331;287332;287333;287334;287335;287336;287337;287338;287339;287340;287341 227372;227373;227374;227375;227376;227377;227378 227377 319 2 MAQEYMK Unmodified 899.38811 0.38810985 318 O43318 MAP3K7 Mitogen-activated protein kinase kinase kinase 7 yes yes 0 0 0 By MS/MS 2 0 1 1 23.941 19.813 2 0.040752 26332 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.294 62.527 17783000 0 17783000 0 0 0 0 0 0 0 0 0 0 0 0 0 34213 318 31229 287342 227379 227379 1 MAQFDAK Oxidation (M) 825.36909 0.36908897 1211 P26641 EEF1G Elongation factor 1-gamma yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 6.21 4.02 2 5 2 10 2 6 1 1 1 1 1 1 1 1 1 1 1 18.475 17.517 1;2 0.005381 14141 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.13 87.304 900570000 65232000 608350000 43072000 11757000 8275100 26831000 13916000 11026000 9184900 27347000 0 0 16549000 20122000 38900000 34214 1211 31230 287343;287344;287345;287346;287347;287348;287349;287350;287351;287352;287353;287354;287355;287356;287357;287358;287359;287360;287361 227380;227381;227382;227383;227384;227385;227386;227387;227388;227389 227382 1777 9 MAQFDAK Unmodified 809.37417 0.37417435 1211 P26641 EEF1G Elongation factor 1-gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 8.93 2.63 1 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22.209 21.754 2 0.023335 22839 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 90.706 60.038 4769300000 762090 3913900000 0 32693000 23713000 97239000 40860000 40470000 27191000 70608000 105150000 85170000 56425000 73490000 201610000 34215 1211 31230 287362;287363;287364;287365;287366;287367;287368;287369;287370;287371;287372;287373;287374;287375 227390;227391;227392;227393;227394 227391 5 MAQLGPISDAK Oxidation (M) 1145.5751 0.575059 3996 Q96SY0 VWA9 von Willebrand factor A domain-containing protein 9 yes yes 0 1 0 By MS/MS By MS/MS 6 4 1 1 1 1 42.378 40.145 2 0.017585 51263 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.73 41.71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34216 3996 31231 287376;287377 227395;227396 227395 5478 2 MAQWGNK Unmodified 833.38541 0.38540773 1120 P21266 GSTM3 Glutathione S-transferase Mu 3 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 22.966 18.537 2 0.024963 24351 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.33 67.778 187210000 169860000 17347000 0 0 0 0 0 0 0 0 0 0 0 0 0 34217 1120 31232 287378;287379 227397;227398;227399 227398 3 MAQWGNKPVC Unmodified 1189.5372 0.5372337 1120 P21266 GSTM3 Glutathione S-transferase Mu 3 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 44.386 38.344 2 6.0891E-05 50032 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.83 132.37 564180000 409590000 154600000 0 0 0 0 0 0 0 0 0 0 0 0 0 34218 1120 31233 287380;287381 227400;227401 227400 2 MAQYLEEER Unmodified 1167.523 0.52302343 2598 Q16204 CCDC6 Coiled-coil domain-containing protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 37.816 38.12 2 0.0037823 41072 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.948 57.719 25227000 0 0 0 0 0 3722900 0 0 0 5960500 0 0 0 5383200 10161000 34219 2598 31234 287382;287383;287384;287385;287386;287387 227402;227403;227404;227405;227406;227407 227404 6 MASAELQGK Acetyl (Protein N-term);Oxidation (M) 991.46445 0.46444592 2999 Q6ZMI0 PPP1R21 Protein phosphatase 1 regulatory subunit 21 yes yes 1 1 0 By MS/MS 2 0 1 1 11.248 7.97 2 0.035226 10990 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 41.025 13.538 4096500 0 4096500 0 0 0 0 0 0 0 0 0 0 0 0 0 34220 2999 31235 287388 227408 227408 0 MASAPASYGSTTTK Unmodified 1371.634 0.63403044 3564 Q8WVM8 SCFD1 Sec1 family domain-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 29.468 25.12 2 0.030737 32874 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.691 39.243 12129000 0 12129000 0 0 0 0 0 0 0 0 0 0 0 0 0 34221 3564 31236 287389 227409 227409 1 MASATSSSQRDWGK Oxidation (M) 1526.6784 0.67835487 4002 Q96T88 UHRF1 E3 ubiquitin-protein ligase UHRF1 yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 17.962 14.47 3 0.0013193 20998 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.472 57.295 35364000 30640000 0 4724200 0 0 0 0 0 0 0 0 0 0 0 0 34222 4002 31237 287390;287391 227410;227411 227411 5479 2 MASATSSSQRDWGK Unmodified 1510.6834 0.68344025 4002 Q96T88 UHRF1 E3 ubiquitin-protein ligase UHRF1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 24.58 20.491 3 7.3911E-10 29213 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.877 71.958 68741000 56941000 7581900 4218800 0 0 0 0 0 0 0 0 0 0 0 0 34223 4002 31237 287392;287393;287394 227412;227413 227412 2 MASEELQKDLEEVK Unmodified 1647.8026 0.80255233 4497 Q9HB71 CACYBP Calcyclin-binding protein yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 50.735 45.414 2 0.0078104 58855 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.749 29.422 14825000 0 14825000 0 0 0 0 0 0 0 0 0 0 0 0 0 34224 4497 31238 287395;287396 227414 227414 1 MASEREGSGSSGTGEQK Unmodified 1696.7322 0.73224093 1399 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 5.9297 5.1369 3 1.7961E-28 3948 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 92.977 86.093 417370000 11838000 310500000 29148000 4007100 3319500 5355700 6820800 3895900 4475900 0 8645200 0 5159600 5014000 19197000 34225 1399 31239 287397;287398;287399;287400;287401;287402;287403;287404;287405;287406;287407;287408;287409;287410 227415;227416;227417;227418;227419;227420 227418 6 MASEREGSGSSGTGEQK Oxidation (M) 1712.7272 0.72715556 1399 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 1 1 By MS/MS 3 0 1 1 5.6395 2.2783 3 5.4821E-05 3675 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 87.388 79.926 48047000 0 48047000 0 0 0 0 0 0 0 0 0 0 0 0 0 34226 1399 31239 287411 227421 227421 2173 1 MASGAANVVGPK Unmodified 1100.5648 0.56482866 3611 Q92520 FAM3C Protein FAM3C yes yes 0 0 0 By MS/MS 2 0 1 1 33.101 28.567 2 3.3158E-05 37213 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.9 86.515 39087000 0 39087000 0 0 0 0 0 0 0 0 0 0 0 0 0 34227 3611 31240 287412 227422;227423;227424 227423 3 MASGAANVVGPK Oxidation (M) 1116.5597 0.55974328 3611 Q92520 FAM3C Protein FAM3C yes yes 0 1 0 By MS/MS By MS/MS By matching By matching By MS/MS 10 0 5 1 1 1 1 1 20.943 21.277 2 0.0076159 22407 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 45.161 28.385 12083000 0 0 0 2018600 0 0 0 0 0 0 2366700 3739900 3957300 0 0 34228 3611 31240 287413;287414;287415;287416;287417 227425;227426 227426 5106 2 MASGHAFQPDLVK Unmodified 1399.6918 0.69182009 3159 Q86V21 AACS Acetoacetyl-CoA synthetase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 4 1 1 2 57.083 51.626 2;3 4.5204E-21 64068 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 142.07 108.81 455480000 323680000 65643000 66161000 0 0 0 0 0 0 0 0 0 0 0 0 34229 3159 31241 287418;287419;287420;287421 227427;227428;227429;227430;227431;227432;227433 227430 6 MASGHAFQPDLVK Oxidation (M) 1415.6867 0.68673471 3159 Q86V21 AACS Acetoacetyl-CoA synthetase yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 51.997 45.985 3 0.02512 63907 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.025 31.295 283430000 205220000 0 78210000 0 0 0 0 0 0 0 0 0 0 0 0 34230 3159 31241 287422;287423 227434 227434 0 MASNIFGPTEEPQNIPK Oxidation (M) 1887.9037 0.90366336 4460 Q9H910 HN1L Hematological and neurological expressed 1-like protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.366 69.439 2 3.2073E-19 79017 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 103.88 89.42 108940000 0 0 0 2868000 3401900 3604300 5303600 3774500 3609400 5295900 15468000 21360000 5577100 12967000 25708000 34231 4460 31242 287424;287425;287426;287427;287428;287429;287430;287431;287432;287433;287434;287435 227435;227436;227437;227438;227439;227440;227441;227442;227443;227444;227445;227446 227438 5899 12 MASNIFGPTEEPQNIPK Unmodified 1871.9087 0.90874874 4460 Q9H910 HN1L Hematological and neurological expressed 1-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 74.16 74.277 2 1.1768E-60 85091 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 168.98 149.88 127680000 0 0 0 0 3072400 0 4248300 0 0 6103300 19531000 21277000 4658200 16292000 52498000 34232 4460 31242 287436;287437;287438;287439;287440;287441;287442;287443 227447;227448;227449;227450;227451;227452;227453 227449 7 MASNIFGTPEENQASWAK Oxidation (M) 1995.8996 0.89964061 4956 Q9UK76 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.67 3.89 4 1 4 1 3 1 1 1 1 1 74.608 72.052 2 1.556E-132 90116 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 226.23 220.28 448240000 10257000 385630000 4398700 0 0 0 0 0 0 0 9509500 15534000 0 9472800 13436000 34233 4956 31243 287444;287445;287446;287447;287448;287449;287450;287451;287452 227454;227455;227456;227457;227458;227459;227460;227461;227462 227454 6303 8 MASNIFGTPEENQASWAK Unmodified 1979.9047 0.90472599 4956 Q9UK76 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 77.746 75.743 2 4.6316E-58 95941 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 153.81 145.9 987340000 33316000 869510000 0 0 0 0 0 0 0 0 14862000 14694000 0 11461000 43502000 34234 4956 31243 287453;287454;287455;287456;287457;287458 227463;227464;227465;227466;227467;227468;227469 227466 6 MASPPAPSPAPPAISPIIK Oxidation (M) 1857.007 0.0070062184 2039 Q00587 CDC42EP1 Cdc42 effector protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 23 2 2 2 2 2 1 2 2 2 2 2 2 78.91 78.963 2;3 1.2055E-38 90475 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 115.8 106.85 289830000 0 0 0 16118000 24335000 18642000 28228000 24436000 13005000 24864000 27815000 37662000 24529000 23787000 26412000 34235 2039 31244 287459;287460;287461;287462;287463;287464;287465;287466;287467;287468;287469;287470;287471;287472;287473;287474;287475;287476;287477;287478;287479;287480;287481 227470;227471;227472;227473;227474;227475;227476;227477;227478;227479 227476 3295 10 MASPPAPSPAPPAISPIIK Unmodified 1841.0121 0.012091596 2039 Q00587 CDC42EP1 Cdc42 effector protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.018 81.078 2 1.3543E-05 93856 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 84.297 50.427 84648000 0 0 0 3117900 4601400 7095500 5050100 8884300 3849100 7984500 9457200 8845800 5685400 6198900 13878000 34236 2039 31244 287482;287483;287484;287485;287486;287487;287488;287489;287490;287491;287492;287493 227480;227481;227482;227483;227484;227485;227486;227487;227488;227489;227490;227491 227485 12 MASQNSFRIEYDTFGELK Unmodified 2134.9994 0.99935466 854 P07954 FH Fumarate hydratase, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 43.718 43.845 3 0.033654 48052 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 24.538 0.49685 102350000 0 0 0 7419800 7160900 8411400 11314000 14151000 0 13235000 0 18293000 0 10081000 12285000 34237 854 31245 287494;287495;287496;287497;287498;287499;287500;287501;287502 227492 227492 1 MASTFIGNSTAIQELFK Unmodified 1856.9342 0.93423521 4160 Q9BUF5 TUBB6 Tubulin beta-6 chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 5.4 3.77 2 1 2 1 2 1 1 95.663 92.478 2 1.3496E-62 115517 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 161.48 13.612 118130000 47458000 65288000 0 0 0 0 0 0 0 1327900 0 0 0 0 4057100 34238 4160 31246 287503;287504;287505;287506;287507 227493;227494;227495;227496 227496 4 MASVRQHLEETTQK Unmodified 1656.8254 0.82535346 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 1 By MS/MS 2 0 1 1 35.562 29.214 3 0.0033861 41518 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.817 44.733 51813000 51813000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34239 965 31247 287508 227497;227498 227497 2 MASVVIDDLPK Oxidation (M) 1202.6217 0.62167484 2653 Q2NKX8 ERCC6L DNA excision repair protein ERCC-6-like yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 70.844 66.141 2 0.00069957 84114 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.09 75.819 28384000 0 26898000 1485600 0 0 0 0 0 0 0 0 0 0 0 0 34240 2653 31248 287509;287510 227499 227499 4319 1 MASVVIDDLPK Unmodified 1186.6268 0.62676022 2653 Q2NKX8 ERCC6L DNA excision repair protein ERCC-6-like yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 73.984 74.124 2 0.0061917 84892 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.657 44.568 25529000 0 0 0 0 0 3088800 0 0 3409300 3592200 0 0 3755200 3847400 7835700 34241 2653 31248 287511;287512;287513;287514;287515;287516 227500;227501;227502 227500 3 MATADEIVK Oxidation (M) 992.48485 0.48484701 2672 Q3LXA3 DAK Bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase (cyclizing);ATP-dependent dihydroxyacetone kinase;FAD-AMP lyase (cyclizing) yes yes 0 1 0 By MS/MS By matching 2 0 2 1 1 28.438 24.711 2 0.0082212 32355 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.251 35.464 103500000 0 101090000 2404900 0 0 0 0 0 0 0 0 0 0 0 0 34242 2672 31249 287517;287518 227503 227503 4337 1 MATADEIVK Unmodified 976.48993 0.48993238 2672 Q3LXA3 DAK Bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase (cyclizing);ATP-dependent dihydroxyacetone kinase;FAD-AMP lyase (cyclizing) yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 40.425 35.333 2 0.0093036 46146 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.696 39.848 603970000 10964000 591120000 1893800 0 0 0 0 0 0 0 0 0 0 0 0 34243 2672 31249 287519;287520;287521 227504;227505 227504 2 MATDFAENELDLFRK Unmodified 1798.856 0.85598488 3556 Q8WV22 NSMCE1 Non-structural maintenance of chromosomes element 1 homolog yes yes 0 0 1 By MS/MS 2 0 1 1 89.783 84.91 3 0.013056 105603 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 27.643 24.038 13494000 0 13494000 0 0 0 0 0 0 0 0 0 0 0 0 0 34244 3556 31250 287522 227506 227506 1 MATEQGRMK Unmodified 1050.495 0.49503454 896 P09960 LTA4H Leukotriene A-4 hydrolase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 8.6067 5.5211 2 0.0030807 7247 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 127.56 99.347 175190000 106060000 46271000 22856000 0 0 0 0 0 0 0 0 0 0 0 0 34245 896 31251 287523;287524;287525 227507;227508;227509;227510 227510 4 MATEVAADALGEEWK Oxidation (M) 1635.745 0.74503745 1909 P62753 RPS6 40S ribosomal protein S6 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 72.656 72.726 2 1.7101E-49 84131 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 167.3 153.95 56388000 0 0 0 3755200 0 4958900 3943100 3126000 0 7204300 8929700 11650000 6436600 6383900 0 34246 1909 31252 287526;287527;287528;287529;287530;287531;287532;287533;287534;287535 227511;227512;227513;227514;227515;227516;227517;227518;227519;227520;227521 227518 3084 11 MATEVAADALGEEWK Unmodified 1619.7501 0.75012283 1909 P62753 RPS6 40S ribosomal protein S6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 77.557 77.639 2 1.1502E-27 89148 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 121.02 105.45 4508200 0 0 0 0 0 0 0 0 0 0 0 0 4508200 0 0 34247 1909 31252 287536;287537;287538;287539 227522;227523;227524;227525 227522 4 MATFEIDEK Unmodified 1082.4954 0.49541169 1006 P14735 IDE Insulin-degrading enzyme yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.42 3.66 3 1 8 1 2 1 1 1 1 1 1 1 1 1 55.95 53.912 2 0.003452 60743 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 104.06 99.375 700880000 16689000 580230000 5913400 50135000 2843000 0 3225400 4971000 0 0 9295000 0 0 7524500 20060000 34248 1006 31253 287540;287541;287542;287543;287544;287545;287546;287547;287548;287549;287550;287551 227526;227527;227528;227529;227530;227531;227532;227533;227534;227535;227536;227537;227538;227539 227531 14 MATFEIDEK Oxidation (M) 1098.4903 0.49032632 1006 P14735 IDE Insulin-degrading enzyme yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.12 3.89 3 1 4 1 2 1 1 1 1 1 46.672 43.561 2 0.0024972 50066 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 88.921 75.884 334300000 16204000 242770000 3687600 53630000 0 0 0 0 0 0 0 0 8047500 0 9959100 34249 1006 31253 287552;287553;287554;287555;287556;287557;287558;287559 227540;227541;227542;227543;227544;227545;227546;227547;227548 227548 1376 8 MATGIEDSELRR Unmodified 1376.6718 0.67181293 2331 Q13619 CUL4A Cullin-4A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.7 38.879 3 7.6023E-06 42885 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 76.522 58.857 260350000 0 0 0 7222400 8976500 22795000 10208000 16825000 8782300 20789000 31746000 32167000 19666000 23211000 57961000 34250 2331 31254 287560;287561;287562;287563;287564;287565;287566;287567;287568;287569;287570;287571 227549;227550;227551;227552;227553;227554;227555;227556;227557;227558;227559;227560;227561 227555 13 MATGIEDSELRR Oxidation (M) 1392.6667 0.66672755 2331 Q13619 CUL4A Cullin-4A yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 30.608 31.018 3 0.0018526 33499 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 49.934 41.205 65673000 0 0 0 0 0 0 0 12229000 7962000 0 0 18941000 9916500 0 16625000 34251 2331 31254 287572;287573;287574;287575;287576 227562;227563;227564;227565 227564 3802 4 MATGLER Unmodified 776.38507 0.38507338 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 19.451 19.574 2 0.017319 20005 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 114.19 36.437 637830000 0 0 0 60630000 70844000 61892000 69740000 0 54066000 102120000 0 0 112990000 98540000 7007300 34252 1681 31255 287577;287578;287579;287580;287581;287582;287583;287584;287585 227566;227567;227568;227569 227569 3 MATGLER Oxidation (M) 792.37999 0.379988 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 9.5743 9.9321 2 0.035084 8053 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.604 13.883 88984000 0 0 0 0 0 0 0 0 0 0 27071000 37380000 0 0 24533000 34253 1681 31255 287586;287587;287588 227570;227571 227570 2 MATNAAAQNAIK Unmodified 1202.6078 0.60775611 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 26.986 27.259 2 4.4434E-34 29594 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 174.92 163.32 244780000 0 0 0 0 13079000 38102000 0 13096000 0 36130000 29253000 24474000 23744000 24753000 42150000 34254 5187 31256 287589;287590;287591;287592;287593;287594;287595;287596;287597 227572;227573;227574;227575;227576;227577;227578;227579;227580;227581;227582 227582 9 MATNAAAQNAIK Oxidation (M) 1218.6027 0.60267073 5187 Q9Y490 TLN1 Talin-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.63 18.824 2 1.4379E-06 18953 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 113.71 83.54 87290000 0 0 0 5189700 5165900 12154000 6105700 4398900 5096900 10226000 6560700 9313500 6277800 4368900 12431000 34255 5187 31256 287598;287599;287600;287601;287602;287603;287604;287605;287606;287607;287608;287609 227583;227584;227585;227586;227587;227588;227589;227590;227591;227592 227590 6564 4 MATNFLAHEK Unmodified 1160.5648 0.56482866 1255 P29692 EEF1D Elongation factor 1-delta yes yes 0 0 0 By MS/MS 2 0 1 1 46.212 42.36 3 0.038294 53752 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 39.785 23.114 28304000 0 0 28304000 0 0 0 0 0 0 0 0 0 0 0 0 34256 1255 31257 287610 227593 227593 1 MATNTVYVFAK Unmodified 1243.6271 0.62709457 1291 P30876 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 73.24 66.311 2 0.0058778 87172 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.879 61.239 67889000 47631000 20258000 0 0 0 0 0 0 0 0 0 0 0 0 0 34257 1291 31258 287611;287612 227594;227595 227595 2 MATNTVYVFAK Oxidation (M) 1259.622 0.62200919 1291 P30876 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 0 1 0 By MS/MS 2 0 1 1 65.68 57.391 2 0.0058987 77077 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.425 56.663 15417000 15417000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34258 1291 31258 287613 227596 227596 1901 1 MATVWDEAEQDGIGEEVLK Oxidation (M) 2134.9729 0.97286514 1066 P17980 PSMC3 26S protease regulatory subunit 6A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching 8.25 3.03 1 3 1 1 1 1 83.784 82.947 2 0.0012539 96407 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 42.095 36.711 20353000 0 7153200 0 0 2849300 3804900 0 0 0 6545400 0 0 0 0 0 34259 1066 31259 287614;287615;287616;287617 227597;227598;227599 227597 1505 2 MATVWDEAEQDGIGEEVLK Unmodified 2118.978 0.97795051 1066 P17980 PSMC3 26S protease regulatory subunit 6A yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 88.984 84.942 2 8.171E-70 105522 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 204.94 191.35 118150000 0 118150000 0 0 0 0 0 0 0 0 0 0 0 0 0 34260 1066 31259 287618;287619 227600;227601 227600 2 MATYLTGELTATSEDYK Oxidation (M) 1908.8663 0.8662748 2965 Q6QNY1 BLOC1S2 Biogenesis of lysosome-related organelles complex 1 subunit 2 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 76.516 71.678 2 1.0368E-130 89491 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 222.99 205.62 35859000 0 35859000 0 0 0 0 0 0 0 0 0 0 0 0 0 34261 2965 31260 287620;287621 227602;227603 227602 4590 2 MATYLTGELTATSEDYK Unmodified 1892.8714 0.87136018 2965 Q6QNY1 BLOC1S2 Biogenesis of lysosome-related organelles complex 1 subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 79.954 75.243 2 5.1101E-182 94222 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 240.65 229.33 98642000 7293700 88713000 2634800 0 0 0 0 0 0 0 0 0 0 0 0 34262 2965 31260 287622;287623;287624;287625 227604;227605;227606;227607 227604 4 MAVDDFNLK Unmodified 1051.5008 0.50083142 106 Q9C075;CON__Q9C075;CON__Q99PS0 KRT23 Keratin, type I cytoskeletal 23 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 65.523 65.569 2 0.0051115 75003 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 83.265 74.846 + 100540000 0 0 0 24763000 5217100 5252200 4191300 13945000 4233600 8891800 7846700 15724000 6504300 3975100 0 34263 106 31261 287626;287627;287628;287629;287630;287631;287632;287633;287634;287635;287636 227608;227609;227610;227611;227612;227613;227614;227615;227616;227617;227618 227614 10 MAVDDFNLK Oxidation (M) 1067.4957 0.49574604 106 Q9C075;CON__Q9C075;CON__Q99PS0 KRT23 Keratin, type I cytoskeletal 23 yes no 0 1 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 52.064 51.827 2 0.0078442 59447 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 62.107 40.148 + 31592000 0 0 0 15069000 5012900 0 7489300 0 0 4021100 0 0 0 0 0 34264 106 31261 287637;287638;287639;287640 227619;227620;227621;227622 227621 141 4 MAVGPPDCPVGGPLTFPGR Oxidation (M) 1939.9284 0.92843832 3404 Q8NBZ0 INO80E INO80 complex subunit E yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 80.25 80.302 2 0.00056655 92428 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 47.915 47.915 21871000000 0 0 0 612950000 1086100000 0 853140000 1025100000 0 3433700000 3779400000 4240100000 1014100000 1994600000 3832000000 34265 3404 31262 287641;287642;287643;287644;287645;287646;287647;287648;287649;287650 227623 227623 4960 1 MAVLALLAK Oxidation (M) 944.57287 0.57287415 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 77.591 76.936 2 0.003243 87718 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.265 55.458 207850000 0 28489000 9927100 6110200 8389600 14106000 11145000 13536000 9247600 16174000 13903000 17274000 15443000 15976000 28127000 34266 1986 31263 287651;287652;287653;287654;287655;287656;287657;287658;287659;287660;287661;287662;287663;287664;287665 227624;227625;227626;227627;227628;227629;227630;227631;227632;227633;227634;227635;227636;227637 227628 3221 14 MAVLALLAK Unmodified 928.57796 0.57795953 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86.342 85.589 2 0.0094151 98621 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.799 52.017 159820000 32331000 2489400 0 2582200 4512500 7472700 5053100 10391000 6568000 9515600 8285700 13929000 6215700 12713000 37757000 34267 1986 31263 287666;287667;287668;287669;287670;287671;287672;287673;287674;287675;287676;287677;287678;287679 227638;227639;227640;227641;227642;227643;227644;227645;227646;227647;227648;227649 227640 12 MAVLANGVMNSLQDR Oxidation (M) 1633.7916 0.79161049 3358 Q8N6H7 ARFGAP2 ADP-ribosylation factor GTPase-activating protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 2 1 1 72.865 73.032 2 4.4831E-06 84177 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 82.171 65.973 15758000 0 0 0 0 0 0 0 0 0 7313100 5408300 0 0 3036700 0 34268 3358 31264 287680;287681;287682;287683;287684 227650;227651;227652;227653 227652 4933;4934 4 MAVLANGVMNSLQDR 2 Oxidation (M) 1649.7865 0.78652511 3358 Q8N6H7 ARFGAP2 ADP-ribosylation factor GTPase-activating protein 2 yes yes 0 2 0 By MS/MS By matching 10 0 2 1 1 53.876 54.125 2 0.00040859 61492 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 57.348 43.995 6546000 0 0 0 0 0 0 2500700 0 0 0 4045300 0 0 0 0 34269 3358 31264 287685;287686 227654 227654 4933;4934 1 MAVLANGVMNSLQDR Unmodified 1617.7967 0.79669587 3358 Q8N6H7 ARFGAP2 ADP-ribosylation factor GTPase-activating protein 2 yes yes 0 0 0 By MS/MS 10 0 1 1 78.798 79.044 2 3.1528E-05 90958 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.401 25.301 11756000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11756000 34270 3358 31264 287687 227655 227655 1 MAVLNEQVK Oxidation (M) 1046.543 0.54303059 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 29.572 29.764 2 0.0079076 32375 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 61.962 34.438 278720000 0 0 0 12866000 11155000 9959500 16539000 13570000 11969000 19957000 34722000 34989000 25849000 25427000 61720000 34271 1564 31265 287688;287689;287690;287691;287692;287693;287694;287695;287696;287697;287698;287699;287700;287701;287702;287703;287704;287705;287706;287707;287708;287709;287710;287711 227656;227657;227658;227659;227660;227661;227662;227663;227664;227665;227666;227667;227668 227668 2486 12 MAVLNEQVK Unmodified 1030.5481 0.54811597 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44.944 43.84 2 0.0034522 49895 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 94.302 67.048 1110000000 24502000 354060000 4458500 48196000 24508000 36735000 0 39439000 23057000 49005000 100850000 85373000 56876000 55574000 207320000 34272 1564 31265 287712;287713;287714;287715;287716;287717;287718;287719;287720;287721;287722;287723;287724;287725 227669;227670;227671;227672;227673;227674;227675;227676;227677;227678;227679;227680;227681;227682;227683 227682 15 MAVLTLYTDPMGSEK 2 Oxidation (M) 1686.7845 0.78445943 3365 Q8N7B1 HORMAD2 HORMA domain-containing protein 2 yes yes 0 2 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 75.789 75.964 2 0.00093429 87618 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 45.973 11.085 53039000 0 0 0 0 0 0 0 5400200 0 8251800 0 11004000 7980700 8366800 12035000 34273 3365 31266 287726;287727;287728;287729;287730;287731;287732;287733 227684;227685;227686 227684 4937;4938 3 MAVNSFPK Oxidation (M) 908.44259 0.44258826 4138 Q9BTA9 WAC WW domain-containing adapter protein with coiled-coil yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 29.014 27.832 2 0.011482 29944 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 65.676 35.257 55544000 11122000 0 1612200 6266300 0 0 8101800 9942700 0 0 0 11019000 0 7479400 0 34274 4138 31267 287734;287735;287736;287737;287738;287739;287740;287741 227687;227688;227689;227690 227688 5624 4 MAVNSFPK Unmodified 892.44767 0.44767364 4138 Q9BTA9 WAC WW domain-containing adapter protein with coiled-coil yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 41.631 41.985 2 0.017693 45792 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 65.252 53.483 107460000 0 0 0 0 0 28022000 0 0 0 0 0 0 0 30061000 49376000 34275 4138 31267 287742;287743;287744 227691 227691 1 MAVQDAVDALMQK Oxidation (M) 1434.6847 0.6846858 1495 P46060 RANGAP1 Ran GTPase-activating protein 1 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 1 1 2 1 3 2 1 3 2 1 77.015 77.121 2 0.00042201 86898 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 74.841 57.717 98954000 0 0 0 0 3859800 5359100 6732500 9924500 0 22198000 9181300 5195800 18092000 8794600 9615400 34276 1495 31268 287745;287746;287747;287748;287749;287750;287751;287752;287753;287754;287755;287756;287757;287758;287759;287760;287761;287762 227692;227693;227694;227695;227696;227697;227698;227699;227700;227701;227702;227703 227692 2356;2357 10 MAVQDAVDALMQK 2 Oxidation (M) 1450.6796 0.67960042 1495 P46060 RANGAP1 Ran GTPase-activating protein 1 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 2 1 2 1 2 1 2 2 2 3 2 62.976 63.11 2 1.5465E-12 72325 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 123.79 104.7 216970000 0 0 0 14057000 16065000 11961000 23440000 9745800 14985000 14870000 26227000 27871000 21836000 13745000 22167000 34277 1495 31268 287763;287764;287765;287766;287767;287768;287769;287770;287771;287772;287773;287774;287775;287776;287777;287778;287779;287780;287781;287782;287783 227704;227705;227706;227707;227708;227709;227710;227711;227712;227713;227714;227715;227716;227717 227706 2356;2357 11 MAVQDAVDALMQK Unmodified 1418.6898 0.68977118 1495 P46060 RANGAP1 Ran GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching 7.33 3.77 1 2 1 1 1 86.398 84.867 2;3 0.00086673 98558 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 86.898 73.52 17103000 0 9681900 0 0 0 0 0 0 0 0 5699000 0 1722300 0 0 34278 1495 31268 287784;287785;287786 227718;227719 227719 2 MAVTFIGNSTAIQELFK Oxidation (M) 1884.9655 0.96553533 842 P07437 TUBB Tubulin beta chain yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 6 2 18 2 4 2 1 2 1 2 2 1 2 1 1 2 2 1 94.914 93.84 2;3 1.0421E-275 115446 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 266.74 216.45 764810000 186320000 364230000 13185000 5089100 7590200 6671100 5641400 16753000 6245000 63828000 35006000 12651000 4684400 15231000 21688000 34279 842 31269 287787;287788;287789;287790;287791;287792;287793;287794;287795;287796;287797;287798;287799;287800;287801;287802;287803;287804;287805;287806;287807;287808;287809;287810;287811;287812 227720;227721;227722;227723;227724;227725;227726;227727;227728;227729;227730;227731;227732;227733;227734;227735;227736;227737;227738;227739;227740;227741;227742 227724 1042 20 MAVTFIGNSTAIQELFK Unmodified 1868.9706 0.97062071 842 P07437 TUBB Tubulin beta chain yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 98.954 93.57 2 5.8588E-09 117294 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.69 112.03 47718000 11491000 36227000 0 0 0 0 0 0 0 0 0 0 0 0 0 34280 842 31269 287813;287814;287815 227743;227744;227745;227746 227743 4 MAVVDIYHSR Unmodified 1189.5914 0.59137776 507 O75478 TADA2A Transcriptional adapter 2-alpha yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 52.328 52.358 3 0.0038162 58325 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 56.404 45.24 34296000 0 0 0 2520700 4697500 7830300 0 0 0 5824700 6727500 6695000 0 0 0 34281 507 31270 287816;287817;287818;287819;287820;287821 227747;227748 227748 2 MAYELWRNLEEEEDGETK Unmodified 2240.9896 0.98957783 4358 Q9H267 VPS33B Vacuolar protein sorting-associated protein 33B yes yes 0 0 1 By MS/MS 2 0 1 1 86.135 78.004 3 0.0046431 101725 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.798 33.259 8449200 8449200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34282 4358 31271 287822 227749 227749 1 MAYLDQTLPR Oxidation (M) 1222.6016 0.6016081 37 A8MPP1;Q92771 DDX11L8;DDX12P Putative ATP-dependent RNA helicase DDX11-like protein 8;Putative ATP-dependent RNA helicase DDX12 yes no 0 1 0 By MS/MS 10 0 1 1 55.531 55.687 2 0.017218 63133 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 44.377 27.92 3072200 0 0 0 0 0 0 0 0 0 3072200 0 0 0 0 0 34283 37 31272 287823 227750 227750 36 1 MCDFGISGYLVDSVAK Oxidation (M) 1776.8063 0.8062575 1688;1505 P46734;P52564 MAP2K3;MAP2K6 Dual specificity mitogen-activated protein kinase kinase 3;Dual specificity mitogen-activated protein kinase kinase 6 no no 0 1 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 89.369 86.541 2 1.2804E-12 107683 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.33 91.426 7209400 0 4321300 2888100 0 0 0 0 0 0 0 0 0 0 0 0 34284 1505;1688 31273 287824;287825;287826 227751;227752;227753 227751 2377 3 MCDFGISGYLVDSVAK Unmodified 1760.8113 0.81134288 1688;1505 P46734;P52564 MAP2K3;MAP2K6 Dual specificity mitogen-activated protein kinase kinase 3;Dual specificity mitogen-activated protein kinase kinase 6 no no 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 93.144 89.453 2 0.014619 108253 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 45.077 38.641 46812000 0 45762000 1049100 0 0 0 0 0 0 0 0 0 0 0 0 34285 1505;1688 31273 287827;287828 227754;227755 227755 1 MCLFAGFQR Unmodified 1128.5209 0.52085536 2046 Q00839 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.872 79.93 2 0.0030689 91555 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 91.906 81.439 90955000 0 0 0 3133100 3618700 7830500 2910900 4480500 8870100 4733100 6518500 15822000 7705500 8901000 16431000 34286 2046 31274 287829;287830;287831;287832;287833;287834;287835;287836;287837;287838;287839;287840 227756;227757;227758;227759;227760;227761;227762;227763;227764;227765;227766;227767;227768 227764 13 MCLFAGFQR Oxidation (M) 1144.5158 0.51576998 2046 Q00839 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 70.967 71.008 2 1.6946E-05 81826 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 135.87 125.95 307900000 0 0 0 11653000 22999000 21737000 15252000 17568000 21389000 22646000 26656000 55632000 59480000 32888000 0 34287 2046 31274 287841;287842;287843;287844;287845;287846;287847;287848;287849;287850;287851 227769;227770;227771;227772;227773;227774;227775;227776;227777;227778;227779 227769 3311 9 MCSIPPK Unmodified 831.39828 0.39828061 5120 Q9Y2V2 CARHSP1 Calcium-regulated heat stable protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 29.575 24.541 2 0.011376 30528 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.24 110.09 127950000 6550900 121400000 0 0 0 0 0 0 0 0 0 0 0 0 0 34288 5120 31275 287852;287853 227780;227781;227782 227780 3 MCSLAVVNLGTHK Unmodified 1428.7217 0.72174001 1794 P57678 GEMIN4 Gem-associated protein 4 yes yes 0 0 0 By MS/MS 2 0 1 1 74.205 66.075 3 0.014482 87416 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 41.293 33.683 8444400 8444400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34289 1794 31276 287854 227783 227783 1 MDAAEVEFLAEK Acetyl (Protein N-term) 1393.6435 0.64353249 5082 Q9Y248 GINS2 DNA replication complex GINS protein PSF2 yes yes 1 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 7.17 4.02 1 1 4 1 1 1 1 1 1 93.772 94.921 2 5.9893E-16 91588 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 149.96 123.9 47776000 41622000 0 0 0 0 993110 0 842600 0 0 0 0 0 1044400 3273900 34290 5082 31277 287855;287856;287857;287858;287859;287860 227784;227785;227786 227786 3 MDAAEVEFLAEK Acetyl (Protein N-term);Oxidation (M) 1409.6384 0.63844712 5082 Q9Y248 GINS2 DNA replication complex GINS protein PSF2 yes yes 1 1 0 By MS/MS 1 0 1 1 104.53 109.8 2 0.0044228 90107 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 89.266 76.213 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34291 5082 31277 287861 227787 227787 6470 1 MDADDSRAPK Acetyl (Protein N-term);Oxidation (M) 1162.4925 0.49245158 2064 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type yes yes 1 1 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.21 3.43 1 2 11 1 2 1 1 1 1 1 1 1 1 1 1 1 17.107 16.787 2 2.9202E-05 99874 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 119.75 97.616 738790000 37564000 153110000 0 0 31270000 49825000 52332000 39084000 34452000 55029000 62889000 76650000 55568000 52796000 38218000 34292 2064 31278 287862;287863;287864;287865;287866;287867;287868;287869;287870;287871;287872;287873;287874;287875 227788;227789;227790;227791;227792;227793;227794;227795;227796;227797;227798;227799;227800;227801;227802 227799 3353 15 MDADDSRAPK Acetyl (Protein N-term) 1146.4975 0.49753696 2064 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 22.321 21.623 2 0.00059535 22751 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 123.5 113.72 1482800000 39290000 291790000 0 54764000 57232000 96019000 79030000 85758000 61464000 109870000 140320000 146630000 97026000 92926000 130700000 34293 2064 31278 287876;287877;287878;287879;287880;287881;287882;287883;287884;287885;287886;287887;287888;287889;287890 227803;227804;227805;227806;227807;227808;227809;227810;227811;227812;227813;227814;227815;227816;227817;227818 227809 15 MDADINVTK Unmodified 1005.4801 0.48009598 3979 Q96RU3 FNBP1 Formin-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 36.664 36.821 2 0.027409 40904 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 49.418 27.458 47586000 0 0 0 0 4428600 6583700 3426800 4796800 3932500 6102800 6708500 0 0 0 11606000 34294 3979 31279 287891;287892;287893;287894;287895;287896;287897;287898 227819 227819 1 MDAEQDPNVQVDHLNLLK Unmodified 2078.0103 0.010253695 2082 Q02818 NUCB1 Nucleobindin-1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 76.832 75.395 3 1.3163E-08 93624 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.021 90.53 140640000 0 133950000 0 0 0 0 0 3282700 0 0 3410200 0 0 0 0 34295 2082 31280 287899;287900;287901;287902 227820;227821;227822 227820 3 MDAEQDPNVQVDHLNLLK Oxidation (M) 2094.0052 0.0051683175 2082 Q02818 NUCB1 Nucleobindin-1 yes yes 0 1 0 By MS/MS By MS/MS 6.5 3.5 1 1 1 1 74.911 73.292 3 0.0006263 84390 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 43.794 40.074 27083000 0 8663300 0 0 0 0 0 0 0 0 18420000 0 0 0 0 34296 2082 31280 287903;287904 227823;227824 227824 3390 2 MDAEVPDVNIEGPDAK Oxidation (M) 1714.772 0.77198048 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 63.895 63.986 2 2.0193E-27 73121 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 126.1 119.57 200260000 0 0 0 14640000 10149000 10003000 18966000 17152000 17935000 10981000 15447000 29839000 23235000 14035000 17875000 34297 2172 31281 287905;287906;287907;287908;287909;287910;287911;287912;287913;287914;287915;287916;287917 227825;227826;227827;227828;227829;227830;227831;227832;227833;227834;227835;227836;227837 227826 3526 13 MDAEVPDVNIEGPDAK Unmodified 1698.7771 0.77706586 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71.68 70.794 2 1.8851E-07 82091 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 86.313 74.581 252120000 6152300 23248000 0 11327000 11101000 15566000 16255000 18796000 13498000 16126000 17687000 27970000 16734000 18515000 39145000 34298 2172 31281 287918;287919;287920;287921;287922;287923;287924;287925;287926;287927;287928;287929;287930;287931 227838;227839;227840;227841;227842;227843;227844;227845;227846;227847;227848;227849;227850 227848 12 MDAFMHEK 2 Oxidation (M) 1039.4103 0.41030186 1569 P49366 DHPS Deoxyhypusine synthase yes yes 0 2 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 11.16 8.0055 2 0.043994 11032 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 61.962 52.722 34851000 4746600 15843000 14262000 0 0 0 0 0 0 0 0 0 0 0 0 34299 1569 31282 287932;287933;287934 227851 227851 0 MDAGFFR Acetyl (Protein N-term) 884.38507 0.38507338 3279 Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 82.458 82.518 2 0.0084231 95597 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 79.454 76.326 43961000 0 0 0 1479700 2504100 2493000 2890900 3530100 3005000 3881200 4587100 4876400 0 5239000 9474800 34300 3279 31283 287935;287936;287937;287938;287939;287940;287941;287942;287943;287944;287945 227852;227853;227854;227855;227856;227857;227858;227859 227858 8 MDAGFFR Acetyl (Protein N-term);Oxidation (M) 900.37999 0.379988 3279 Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 65.11 65.552 2 0.0077296 75003 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 55.441 55.441 22075000 0 0 0 0 0 0 0 0 0 0 6967600 8873800 0 0 6233700 34301 3279 31283 287946;287947;287948 227860;227861;227862 227861 4882 3 MDAGMIGNQVNRK Unmodified 1432.6915 0.69150251 2831 Q5VZE5 NAA35 N-alpha-acetyltransferase 35, NatC auxiliary subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 39.335 38.619 3 2.3854E-06 51897 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.614 79.667 292120000 11068000 0 0 0 11899000 11053000 4426400 5676200 0 58874000 89266000 99856000 0 0 0 34302 2831 31284 287949;287950;287951;287952;287953;287954;287955;287956 227863;227864;227865;227866;227867;227868 227865 5 MDAGMIGNQVNRK 2 Oxidation (M) 1464.6813 0.68133176 2831 Q5VZE5 NAA35 N-alpha-acetyltransferase 35, NatC auxiliary subunit yes yes 0 2 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 17.825 17.999 3 8.519E-05 17428 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 77.593 70.463 44833000 0 0 0 2551900 3204200 0 0 0 0 7176100 9255500 22646000 0 0 0 34303 2831 31284 287957;287958;287959;287960;287961 227869;227870 227870 4486;4487 2 MDAGMIGNQVNRK Oxidation (M) 1448.6864 0.68641714 2831 Q5VZE5 NAA35 N-alpha-acetyltransferase 35, NatC auxiliary subunit yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 2 27.8 28.131 3 9.3713E-05 28175 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 80.69 64.553 79503000 0 0 0 0 3121800 0 0 0 0 8419400 22483000 45478000 0 0 0 34304 2831 31284 287962;287963;287964;287965;287966 227871;227872;227873;227874 227873 4486;4487 2 MDAILTEAIK Unmodified 1103.5896 0.58964643 2757 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 yes yes 0 0 0 By MS/MS 2 0 1 1 78.445 73.709 2 0.010638 91842 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.165 50.642 25367000 0 25367000 0 0 0 0 0 0 0 0 0 0 0 0 0 34305 2757 31285 287967 227875 227875 1 MDALQLANSAFAVDLFK Acetyl (Protein N-term);Oxidation (M) 1910.9448 0.94479989 1383 P36952 SERPINB5 Serpin B5 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6 4 3 3 1 1 1 1 1 1 100.73 98.271 2;3 2.5657E-07 116422 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 80.469 74.623 467350000 12262000 447880000 1473100 0 0 0 0 0 0 2938500 1546500 0 0 0 1247900 34306 1383 31286 287968;287969;287970;287971;287972;287973 227876;227877;227878;227879;227880;227881;227882 227876 2148 7 MDALQLANSAFAVDLFK Acetyl (Protein N-term) 1894.9499 0.94988527 1383 P36952 SERPINB5 Serpin B5 yes yes 1 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 1 3 103.94 98.627 2;3 1.1481E-105 122925 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 208.27 192.13 528200000 6209900 521990000 0 0 0 0 0 0 0 0 0 0 0 0 0 34307 1383 31286 287974;287975;287976;287977 227883;227884;227885;227886;227887 227884 4 MDAPASGSACSGLNK Unmodified 1464.6337 0.63371286 4968 Q9UKJ3 GPATCH8 G patch domain-containing protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 29.966 30.228 2 2.9929E-10 32518 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 96.745 89.814 61458000 0 0 0 0 3190900 0 4366800 6615400 2597700 5014600 7487100 8345100 7995900 6749700 9094300 34308 4968 31287 287978;287979;287980;287981;287982;287983;287984;287985;287986;287987 227888;227889;227890;227891;227892;227893;227894;227895;227896;227897 227896 10 MDAPDGCPPAVYEVMK Oxidation (M) 1794.7627 0.76267813 1438 P41240 CSK Tyrosine-protein kinase CSK yes yes 0 1 0 By MS/MS 2 0 1 1 65.296 59.378 2 0.0010684 76063 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.393 59.419 9356300 0 9356300 0 0 0 0 0 0 0 0 0 0 0 0 0 34309 1438 31288 287988 227898 227898 2263 1 MDAPDGCPPAVYEVMK Unmodified 1778.7678 0.7677635 1438 P41240 CSK Tyrosine-protein kinase CSK yes yes 0 0 0 By MS/MS 2 0 1 1 79.436 74.7 2 0.00039728 93027 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.44 103.48 77441000 0 77441000 0 0 0 0 0 0 0 0 0 0 0 0 0 34310 1438 31288 287989 227899;227900 227899 2 MDAPRQVVNFGPGPAK Acetyl (Protein N-term);Oxidation (M) 1740.8617 0.86173896 5261 Q9Y617 PSAT1 Phosphoserine aminotransferase yes yes 1 1 1 By MS/MS By MS/MS 2 0 2 1 1 70.306 63.239 2 2.6105E-39 81148 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 137.6 109.63 63410000 7140100 56270000 0 0 0 0 0 0 0 0 0 0 0 0 0 34311 5261 31289 287990;287991 227901;227902;227903 227902 6662 3 MDAPRQVVNFGPGPAK Acetyl (Protein N-term) 1724.8668 0.86682434 5261 Q9Y617 PSAT1 Phosphoserine aminotransferase yes yes 1 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 78.909 73.481 2 2.1287E-38 92538 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 167.73 144.13 205980000 9013400 196970000 0 0 0 0 0 0 0 0 0 0 0 0 0 34312 5261 31289 287992;287993;287994 227904;227905;227906 227904 3 MDAQCSAK Acetyl (Protein N-term) 951.379 0.37900173 1577 P49585 PCYT1A Choline-phosphate cytidylyltransferase A yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 18.149 18.296 2 0.016596 18592 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 46.426 28.578 12789000 0 0 0 0 1461400 2058600 0 2540300 0 2589900 2078400 0 0 2060400 0 34313 1577 31290 287995;287996;287997;287998;287999;288000 227907;227908 227907 2 MDASLEK Acetyl (Protein N-term) 834.37932 0.3793193 2940 Q6P996;Q6P474 PDXDC1;PDXDC2P Pyridoxal-dependent decarboxylase domain-containing protein 1;Putative pyridoxal-dependent decarboxylase domain-containing protein 2 yes no 1 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 42.958 43.088 1 0.0085212 46827 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 124.83 45.381 97959000 0 0 0 6646700 5046600 0 6734200 9226000 6257900 12615000 14438000 0 12264000 8901800 15828000 34314 2940 31291 288001;288002;288003;288004;288005;288006;288007;288008;288009;288010 227909;227910 227910 1 MDASLEK Acetyl (Protein N-term);Oxidation (M) 850.37423 0.37423392 2940 Q6P996;Q6P474 PDXDC1;PDXDC2P Pyridoxal-dependent decarboxylase domain-containing protein 1;Putative pyridoxal-dependent decarboxylase domain-containing protein 2 yes no 1 1 0 By MS/MS 1 0 2 2 89.268 94.532 1;2 0.025734 72829 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 41.502 24.575 5383000 5383000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34315 2940 31291 288011;288012 227911;227912 227912 0 MDASTGDAIK Unmodified 1007.4594 0.45936054 3735 Q96AC1 FERMT2 Fermitin family homolog 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 21.734 21.988 2 0.008804 23231 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 59.153 32.93 71119000 0 0 0 0 0 8893800 9859800 8263200 3875500 0 12459000 0 9144100 0 18624000 34316 3735 31292 288013;288014;288015;288016;288017;288018;288019;288020 227913;227914;227915;227916;227917 227913 5 MDATANDVPSDR Unmodified 1290.551 0.55102909 982 P13667 PDIA4 Protein disulfide-isomerase A4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.669 26.87 2 1.0745E-06 28665 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 132.91 120.69 78372000 0 0 0 5039900 4014100 2982400 4837600 4884300 3285000 4876400 12313000 6191000 5164600 7062200 17721000 34317 982 31293 288021;288022;288023;288024;288025;288026;288027;288028;288029;288030;288031;288032 227918;227919;227920;227921;227922;227923;227924;227925;227926;227927;227928;227929;227930 227927 13 MDATANDVPSDR Oxidation (M) 1306.5459 0.54594371 982 P13667 PDIA4 Protein disulfide-isomerase A4 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 2 1 1 1 1 18.207 18.557 2 1.355E-05 17559 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 104.22 91.595 13822000 0 0 0 0 0 0 0 1636200 1222500 1604300 1926400 2905600 1556400 0 2970400 34318 982 31293 288033;288034;288035;288036;288037;288038;288039;288040;288041;288042 227931;227932;227933;227934;227935;227936;227937;227938;227939;227940 227933 1322 8 MDATANDVPSDRYK Unmodified 1581.7093 0.70932065 982 P13667 PDIA4 Protein disulfide-isomerase A4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.71 2.89 3 1 20 1 2 1 2 2 1 2 2 2 2 2 2 1 2 32.267 31.588 2;3 6.323E-25 34468 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 152.07 122.3 1429200000 44398000 895060000 13811000 31467000 39363000 23349000 25850000 36774000 28971000 34159000 65569000 0 45602000 29915000 114920000 34319 982 31294 288043;288044;288045;288046;288047;288048;288049;288050;288051;288052;288053;288054;288055;288056;288057;288058;288059;288060;288061;288062;288063;288064;288065;288066 227941;227942;227943;227944;227945;227946;227947;227948;227949;227950;227951;227952;227953;227954;227955;227956 227950 11 MDATANDVPSDRYK Oxidation (M) 1597.7042 0.70423527 982 P13667 PDIA4 Protein disulfide-isomerase A4 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 27.854 23.562 3 0.0057198 29311 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 52.821 43.288 390660000 21916000 361150000 7596500 0 0 0 0 0 0 0 0 0 0 0 0 34320 982 31294 288067;288068;288069;288070 227957;227958;227959;227960 227959 1322 4 MDATANDVPSPYEVR Oxidation (M) 1679.7461 0.74610008 1270 P30101 PDIA3 Protein disulfide-isomerase A3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.56 1 1 13 2 1 1 1 1 1 1 1 1 1 2 1 1 54.244 53.537 2 3.8495E-114 60775 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 204.49 197.63 259130000 0 32598000 0 10359000 14699000 11501000 17356000 0 10361000 17177000 34291000 25253000 17217000 23274000 45043000 34321 1270 31295 288071;288072;288073;288074;288075;288076;288077;288078;288079;288080;288081;288082;288083;288084;288085 227961;227962;227963;227964;227965;227966;227967;227968;227969;227970;227971;227972;227973;227974;227975;227976;227977;227978;227979;227980 227977 1874 19 MDATANDVPSPYEVR Unmodified 1663.7512 0.75118546 1270 P30101 PDIA3 Protein disulfide-isomerase A3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.183 60.288 2 1.3875E-41 68553 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 162.49 155.95 431110000 0 0 0 16348000 12591000 11919000 16796000 16802000 13511000 16908000 61358000 49142000 15169000 44794000 155770000 34322 1270 31295 288086;288087;288088;288089;288090;288091;288092;288093;288094;288095;288096;288097 227981;227982;227983;227984;227985;227986;227987;227988;227989;227990;227991;227992 227990 12 MDCQETPEGYK Unmodified 1356.5326 0.53260184 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 26.368 24.979 2 7.5604E-11 27526 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 152.81 137.15 76285000 5807300 28481000 0 12467000 0 0 0 0 0 0 0 8575000 0 8104900 12850000 34323 487 31296 288098;288099;288100;288101;288102;288103;288104;288105;288106;288107 227993;227994;227995;227996;227997;227998;227999;228000;228001;228002 228002 10 MDCQETPEGYK Oxidation (M) 1372.5275 0.52751646 487 O75369 FLNB Filamin-B yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 19.764 19.7 2 0.0045269 20276 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 55.461 55.461 4798800 0 0 0 2276700 0 1419000 1103100 0 0 0 0 0 0 0 0 34324 487 31296 288108;288109;288110;288111;288112 228003;228004;228005 228005 621 3 MDDEEETYRLWK Acetyl (Protein N-term);Oxidation (M) 1671.7087 0.70865195 1087 P19388 POLR2E DNA-directed RNA polymerases I, II, and III subunit RPABC1 yes yes 1 1 1 By MS/MS By MS/MS 2 0 2 1 1 74.909 68.267 2 0.0002282 87163 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.056 78.369 28788000 8395400 20392000 0 0 0 0 0 0 0 0 0 0 0 0 0 34325 1087 31297 288113;288114 228006;228007 228006 1562 2 MDDEEETYRLWK Acetyl (Protein N-term) 1655.7137 0.71373732 1087 P19388 POLR2E DNA-directed RNA polymerases I, II, and III subunit RPABC1 yes yes 1 0 1 By MS/MS 2.5 0.5 1 1 2 80.497 76.479 2 3.2588E-24 94872 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 169.58 158.65 24723000 0 24723000 0 0 0 0 0 0 0 0 0 0 0 0 0 34326 1087 31297 288115;288116 228008;228009 228008 2 MDDIFTQCR Acetyl (Protein N-term) 1226.506 0.50599315 2284 Q13418 ILK Integrin-linked protein kinase yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.856 81.918 2 0.0010759 94878 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 93.551 78.884 83386000 0 0 0 3716500 4031100 9037600 5079400 6566000 4130300 8230300 7885000 9828100 5669400 6864800 12348000 34327 2284 31298 288117;288118;288119;288120;288121;288122;288123;288124;288125;288126;288127;288128 228010;228011;228012;228013;228014;228015;228016;228017;228018;228019;228020;228021 228019 12 MDDIFTQCR Acetyl (Protein N-term);Oxidation (M) 1242.5009 0.50090778 2284 Q13418 ILK Integrin-linked protein kinase yes yes 1 1 0 By MS/MS By MS/MS 10 0 2 1 1 63.119 63.287 2 0.0019016 72287 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 58.23 51.925 9296000 0 0 0 0 0 0 0 0 0 5786300 0 0 0 3509700 0 34328 2284 31298 288129;288130 228022;228023 228022 3718 2 MDDKGDPSNEEAPK Acetyl (Protein N-term) 1573.6566 0.65661638 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 1 0 1 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 26.768 27.032 2 0.00037979 28633 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 91.961 73.216 75367000 0 0 0 6024200 0 2078400 6016200 9523000 0 5383400 10737000 10386000 9036500 5860200 10322000 34329 4139 31299 288131;288132;288133;288134;288135;288136;288137;288138;288139;288140 228024;228025;228026;228027;228028;228029;228030 228029 7 MDDKGDPSNEEAPK Acetyl (Protein N-term);Oxidation (M) 1589.6515 0.651531 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 1 1 1 By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 15.357 15.528 2 6.2088E-12 15239 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 100.55 97.821 73138000 0 0 0 5018900 4607200 1431800 7057000 4416800 0 4783500 9258700 14450000 8998200 5919900 7195400 34330 4139 31299 288141;288142;288143;288144;288145;288146;288147;288148;288149;288150;288151 228031;228032;228033;228034;228035;228036 228036 5630 6 MDDLDALLADLESTTSHISK Acetyl (Protein N-term);Oxidation (M) 2232.0468 0.046758361 1558 P49023 PXN Paxillin yes yes 1 1 0 By MS/MS 2 0 1 1 103.02 98.294 2 4.075E-113 121408 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 192.65 187.76 23165000 0 23165000 0 0 0 0 0 0 0 0 0 0 0 0 0 34331 1558 31300 288152 228037 228037 2472 1 MDDLDALLADLESTTSHISK Acetyl (Protein N-term) 2216.0518 0.051843739 1558 P49023 PXN Paxillin yes yes 1 0 0 By MS/MS By MS/MS 2 0 2 1 1 104.83 96.695 2 1.3992E-19 124117 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.84 106.64 5107800 5107800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34332 1558 31300 288153;288154 228038;228039 228038 2 MDDPNFIPFGGDTK Oxidation (M) 1568.6817 0.68170891 5273 Q9Y6A5 TACC3 Transforming acidic coiled-coil-containing protein 3 yes yes 0 1 0 By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching 9 2.65 1 7 1 1 1 1 1 1 1 1 77.224 76.711 2 4.1505E-14 94267 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.77 103.81 65654000 0 48087000 0 1208000 0 0 0 0 1747100 0 3155000 3139300 2652900 2225600 3438800 34333 5273 31301 288155;288156;288157;288158;288159;288160;288161;288162 228040;228041 228040 6678 2 MDDPNFIPFGGDTK Unmodified 1552.6868 0.68679429 5273 Q9Y6A5 TACC3 Transforming acidic coiled-coil-containing protein 3 yes yes 0 0 0 By MS/MS By matching By MS/MS 7.33 3.77 1 2 1 1 1 81.287 79.844 2 0.0014824 98374 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.87 95.908 67253000 0 59938000 0 0 0 0 0 0 0 0 0 2577400 0 0 4738000 34334 5273 31301 288163;288164;288165 228042;228043 228042 2 MDDPTVNWSNER Unmodified 1462.6147 0.61469198 1014 P15170 GSPT1 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A yes yes 0 0 0 By MS/MS 10 0 1 1 52.73 53.388 2 0.023638 59643 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.93 60.285 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34335 1014 31302 288166 228044 228044 1 MDDPTVNWSNERYEECK Unmodified 2171.8888 0.88881793 1014 P15170 GSPT1 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 58.139 56.514 3 4.7866E-13 74585 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 108.34 103.72 285060000 27274000 151880000 4273000 6866300 0 10370000 4631000 0 0 8722600 18252000 11715000 6222300 9609100 25246000 34336 1014 31303 288167;288168;288169;288170;288171;288172;288173;288174;288175;288176;288177;288178;288179 228045;228046;228047;228048;228049;228050;228051;228052;228053;228054;228055;228056;228057;228058;228059;228060 228052 16 MDDPTVNWSNERYEECK Oxidation (M) 2187.8837 0.88373255 1014 P15170 GSPT1 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A yes yes 0 1 1 By MS/MS 2.5 0.5 1 1 2 55.226 49.879 3 5.4821E-05 64434 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.388 84.29 80075000 0 80075000 0 0 0 0 0 0 0 0 0 0 0 0 0 34337 1014 31303 288180;288181 228061;228062;228063 228062 1408 3 MDDREDLVYQAK Acetyl (Protein N-term);Oxidation (M) 1539.6875 0.68752257 1882 P62258 YWHAE 14-3-3 protein epsilon yes yes 1 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.27 3.5 2 21 7 11 5 24 1 1 1 1 1 1 1 1 1 1 1 1 53.683 50.682 2;3 7.7208E-16 93166 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 147.42 133.6 7101200000 404450000 5108600000 167420 0 39219000 68597000 61272000 57356000 50138000 99764000 267360000 294760000 98292000 152100000 399130000 34338 1882 31305 288182;288183;288184;288185;288186;288187;288188;288189;288190;288191;288192;288193;288194;288195;288196;288197;288198;288199;288200;288201;288202;288203;288204;288205;288206;288207;288208;288209;288210;288211;288212;288213;288214;288215;288216;288217;288218;288219;288220;288221;288222 228064;228065;228066;228067;228068;228069;228070;228071;228072;228073;228074;228075;228076;228077;228078;228079;228080;228081;228082;228083;228084;228085;228086;228087;228088;228089;228090;228091;228092;228093;228094;228095;228096;228097;228098;228099;228100;228101;228102;228103;228104;228105;228106;228107;228108;228109;228110 228096 3054 44 MDDREDLVYQAK Acetyl (Protein N-term) 1523.6926 0.69260795 1882 P62258 YWHAE 14-3-3 protein epsilon yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.57 3.97 1 7 1 12 3 5 1 1 1 1 1 1 1 1 1 1 1 1 1 62.658 60.655 2 2.9697E-27 93815 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 183.99 154.32 8394700000 362750000 6592300000 16520000 37567000 27502000 48237000 34893000 36896000 18326000 58418000 204480000 187630000 48790000 133130000 587230000 34339 1882 31305 288223;288224;288225;288226;288227;288228;288229;288230;288231;288232;288233;288234;288235;288236;288237;288238;288239;288240;288241;288242;288243 228111;228112;228113;228114;228115;228116;228117;228118;228119;228120;228121;228122;228123;228124;228125;228126;228127;228128;228129;228130;228131;228132;228133;228134 228124 22 MDDSEVESTASILASVK Acetyl (Protein N-term);Oxidation (M) 1838.8455 0.84553936 426 O60716 CTNND1 Catenin delta-1 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS 7 4.24 1 2 1 1 1 87.963 88.121 2 1.4899E-10 102186 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 86.288 80.804 6451100 0 0 0 0 0 0 0 0 0 4562300 1888800 0 0 0 0 34340 426 31306 288244;288245;288246 228135;228136;228137 228135 540 3 MDDSEVESTASILASVK Acetyl (Protein N-term) 1822.8506 0.85062474 426 O60716 CTNND1 Catenin delta-1 yes yes 1 0 0 By MS/MS 1 0 1 1 105.98 106.88 2 0.00060608 98783 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 83.087 64.13 8039700 0 8039700 0 0 0 0 0 0 0 0 0 0 0 0 0 34341 426 31306 288247 228138 228138 0 MDDTLFQLK Acetyl (Protein N-term);Oxidation (M) 1167.5482 0.54817555 4527 Q9HD42 CHMP1A Charged multivesicular body protein 1a yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.92 3.79 3 10 1 2 1 1 1 1 1 1 1 1 1 1 88.004 88.633 2 0.00067105 95618 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 83.313 67.671 97291000 12901000 12816000 0 0 4559000 0 5898900 3705400 4469500 7140700 7761700 10945000 5666200 8138800 13289000 34342 4527 31307 288248;288249;288250;288251;288252;288253;288254;288255;288256;288257;288258;288259;288260 228139;228140;228141;228142;228143;228144;228145;228146;228147;228148;228149;228150 228149 5949 11 MDDTLFQLK Acetyl (Protein N-term) 1151.5533 0.55326092 4527 Q9HD42 CHMP1A Charged multivesicular body protein 1a yes yes 1 0 0 By MS/MS By MS/MS 1.5 0.5 1 1 1 1 93.191 88.281 2 0.0011277 109545 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.5 93.363 77649000 0 77649000 0 0 0 0 0 0 0 0 0 0 0 0 0 34343 4527 31307 288261;288262 228151;228152 228151 2 MDEARDNACNDMGK Unmodified 1625.6232 0.62322453 4037 Q99622 C12orf57 Protein C10 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.135 14.297 3 0.0015701 13098 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.03 51.03 53473000 0 0 0 1734000 1662800 3181800 2473300 2444300 1980800 4530500 5594600 6652500 4336500 5565100 13317000 34344 4037 31308 288263;288264;288265;288266;288267;288268;288269;288270;288271;288272;288273;288274 228153;228154;228155;228156;228157 228153 5 MDEAVGDLK Acetyl (Protein N-term);Oxidation (M) 1034.459 0.45902619 2557 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog yes yes 1 1 0 By MS/MS By MS/MS 5.5 4.5 1 1 1 1 73.08 75.737 2 0.0045798 49288 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 46.334 22.135 38453000 22649000 0 0 0 0 15804000 0 0 0 0 0 0 0 0 0 34345 2557 31309 288275;288276 228158;228159 228158 4209 2 MDEAVGDLK Acetyl (Protein N-term) 1018.4641 0.46411156 2557 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 22 2 2 2 2 2 2 2 1 2 2 1 2 67.004 67.07 1;2 0.0012213 77147 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 88.948 53.454 279390000 0 0 0 14930000 15960000 33933000 21340000 18445000 14768000 35179000 4585500 37197000 24064000 3527900 55463000 34346 2557 31309 288277;288278;288279;288280;288281;288282;288283;288284;288285;288286;288287;288288;288289;288290;288291;288292;288293;288294;288295;288296;288297;288298 228160;228161;228162;228163;228164;228165;228166;228167;228168;228169;228170;228171;228172;228173 228161 12 MDEDVLTTLK Acetyl (Protein N-term) 1205.585 0.58495498 4536 Q9NP72 RAB18 Ras-related protein Rab-18 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.31 2.4 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 86.828 86.958 2 0.00079412 97953 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 94.692 77.916 91592000 0 10955000 0 3204800 6170400 5062400 5222700 9953000 4674200 7133500 8232700 8166200 6092700 5948400 10776000 34347 4536 31310 288299;288300;288301;288302;288303;288304;288305;288306;288307;288308;288309;288310;288311 228174;228175;228176;228177;228178;228179;228180;228181;228182;228183;228184;228185;228186;228187;228188 228183 15 MDEDVLTTLK Acetyl (Protein N-term);Oxidation (M) 1221.5799 0.5798696 4536 Q9NP72 RAB18 Ras-related protein Rab-18 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 75.594 75.785 2 0.0009325 87452 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 63.283 51.057 28400000 0 0 0 0 0 0 0 4758000 0 0 7702400 9278700 0 6661200 0 34348 4536 31310 288312;288313;288314;288315 228189;228190;228191;228192 228189 5955 4 MDEEPERTK Acetyl (Protein N-term) 1175.5129 0.51285267 2352 Q6P1K8;Q13888 GTF2H2C;GTF2H2 General transcription factor IIH subunit 2-like protein;General transcription factor IIH subunit 2 yes no 1 0 1 By MS/MS 2 0 1 1 23.874 19.745 2 0.011194 26181 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.605 60.963 13588000 0 13588000 0 0 0 0 0 0 0 0 0 0 0 0 0 34349 2352 31311 288316 228193 228193 1 MDEIGNHYTEMVK Oxidation (M) 1581.6803 0.68032871 3566 Q8WVV4 POF1B Protein POF1B yes yes 0 1 0 By MS/MS By matching 10 0 2 1 1 40.011 39.524 3 9.3942E-05 44428 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 81.494 70.849 11678000 0 0 0 10457000 1220800 0 0 0 0 0 0 0 0 0 0 34350 3566 31312 288317;288318 228194 228194 5054 1 MDEIGNHYTEMVK Unmodified 1565.6854 0.68541408 3566 Q8WVV4 POF1B Protein POF1B yes yes 0 0 0 By MS/MS 10 0 1 1 52.694 52.053 3 0.013764 59550 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 27.133 20.553 34033000 0 0 0 34033000 0 0 0 0 0 0 0 0 0 0 0 34351 3566 31312 288319 228195 228195 1 MDEISDHAK Unmodified 1044.4546 0.45460951 1751 P55010 EIF5 Eukaryotic translation initiation factor 5 yes yes 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 13.428 13.578 2 0.046892 12199 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.864 10.737 16527000 0 0 0 1246500 754810 0 1595500 798410 0 1926400 2780500 0 2442100 1485700 3497000 34352 1751 31313 288320;288321;288322;288323;288324;288325;288326;288327;288328 228196 228196 1 MDELQDVQLTEIK Acetyl (Protein N-term) 1602.7811 0.78108861 4889 Q9UGV2 NDRG3 Protein NDRG3 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.88 2.98 1 7 1 1 1 1 1 1 1 1 91.583 92.358 2 2.5296E-10 90666 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 113.69 99.867 43018000 17735000 0 0 0 0 2579300 0 990920 0 3540700 3269000 3812500 0 2774900 8315400 34353 4889 31314 288329;288330;288331;288332;288333;288334;288335;288336 228197;228198;228199;228200;228201;228202;228203;228204 228200 8 MDELQDVQLTEIK Acetyl (Protein N-term);Oxidation (M) 1618.776 0.77600323 4889 Q9UGV2 NDRG3 Protein NDRG3 yes yes 1 1 0 By MS/MS By MS/MS By matching By MS/MS By matching 8.2 3.6 1 4 1 1 1 1 1 86.833 87.879 2 3.3727E-10 95476 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 114.86 106.98 43979000 8067900 0 0 3968100 0 17319000 7679600 0 6944000 0 0 0 0 0 0 34354 4889 31314 288337;288338;288339;288340;288341 228205;228206;228207 228205 6242 3 MDELQLFR Unmodified 1050.5168 0.51681584 1755 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 77.593 77.64 2 0.0053152 89638 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 107.32 86.762 161810000 0 0 0 8653800 3356600 9816600 3798200 8049400 0 8678500 15837000 20491000 8926200 16237000 57960000 34355 1755 31315 288342;288343;288344;288345;288346;288347;288348;288349;288350;288351;288352 228208;228209;228210;228211;228212;228213;228214;228215;228216;228217 228212 10 MDELQLFR Oxidation (M) 1066.5117 0.51173046 1755 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.182 71.265 2 0.0039925 81121 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 138.24 119.92 147420000 0 0 0 13453000 4227300 0 5290200 5072100 3484400 9658100 20913000 23496000 10287000 14551000 36983000 34356 1755 31315 288353;288354;288355;288356;288357;288358;288359;288360;288361;288362;288363;288364 228218;228219;228220;228221;228222;228223;228224;228225;228226;228227;228228;228229 228222 2870 12 MDELQLFRGDTVLLK Unmodified 1776.9444 0.94440596 1755 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 93.81 87.297 3 1.0677E-11 110354 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.25 95.552 144900000 73428000 71471000 0 0 0 0 0 0 0 0 0 0 0 0 0 34357 1755 31316 288365;288366 228230;228231 228230 2 MDELQLFRGDTVLLK Oxidation (M) 1792.9393 0.93932058 1755 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 5.56 4 1 3 1 4 2 2 1 1 1 1 1 89.607 88.174 3 0.00020607 97838 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.185 52.241 285270000 133000000 107450000 12422000 0 0 4478200 0 0 0 0 5644100 0 0 2438900 19841000 34358 1755 31316 288367;288368;288369;288370;288371;288372;288373;288374;288375 228232;228233;228234;228235;228236;228237 228233 2870 4 MDEMATTQISK Acetyl (Protein N-term) 1295.5737 0.57373837 986 P13797 PLS3 Plastin-3 yes yes 1 0 0 By MS/MS By matching By matching By MS/MS 10 0 4 1 1 1 1 64.399 64.654 2 0.0070824 73232 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.353 38.76 17036000 0 0 0 0 0 3626000 0 0 1879700 0 3270700 0 0 0 8259700 34359 986 31317 288376;288377;288378;288379 228238;228239 228239 2 MDEMATTQISK Acetyl (Protein N-term);2 Oxidation (M) 1327.5636 0.56356761 986 P13797 PLS3 Plastin-3 yes yes 1 2 0 By MS/MS 1 0 1 1 79.189 84.453 2 0.00047472 60866 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 77.379 69.159 5578600 5578600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34360 986 31317 288380 228240;228241 228241 1335;1336 2 MDEMATTQISK Acetyl (Protein N-term);Oxidation (M) 1311.5687 0.56865299 986 P13797 PLS3 Plastin-3 yes yes 1 1 0 By MS/MS 1 0 2 2 100.29 105.55 2 0.017271 85830 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 43.512 33.28 8608700 8608700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34361 986 31317 288381;288382 228242;228243 228243 1335;1336 0 MDEMATTQISKDELDELK Acetyl (Protein N-term);2 Oxidation (M) 2169.9657 0.96573085 986 P13797 PLS3 Plastin-3 yes yes 1 2 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.4 3.68 4 1 10 1 3 1 1 1 1 1 1 1 1 1 1 1 73.476 71.87 2;3 2.2655E-119 88652 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 218.11 204.45 228380000 6699200 114530000 1207400 8265900 6164300 13202000 8491900 7066900 6662600 0 17589000 14641000 9216200 0 14646000 34362 986 31318 288383;288384;288385;288386;288387;288388;288389;288390;288391;288392;288393;288394;288395;288396;288397 228244;228245;228246;228247;228248;228249;228250;228251;228252;228253;228254;228255 228246 1335;1336 11 MDEMATTQISKDELDELK Acetyl (Protein N-term);Oxidation (M) 2153.9708 0.97081623 986 P13797 PLS3 Plastin-3 yes yes 1 1 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 5.18 3.66 4 3 4 1 6 1 1 1 1 79.649 76.78 2;3 1.4334E-277 94387 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 269.88 255.45 539110000 9036000 495970000 0 0 0 0 0 0 0 7261900 7966900 0 0 4571400 14305000 34363 986 31318 288398;288399;288400;288401;288402;288403;288404;288405;288406;288407;288408 228256;228257;228258;228259;228260;228261;228262;228263;228264;228265;228266 228256 1335;1336 9 MDEMATTQISKDELDELK Acetyl (Protein N-term) 2137.9759 0.9759016 986 P13797 PLS3 Plastin-3 yes yes 1 0 1 By MS/MS By MS/MS By matching By MS/MS 4.43 3.54 4 1 2 1 4 1 1 85.801 82.355 2;3 2.396E-80 102475 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 234.22 204.53 1283200000 12679000 1256200000 0 0 0 0 0 0 0 0 0 0 0 2144800 12218000 34364 986 31318 288409;288410;288411;288412;288413;288414;288415 228267;228268;228269;228270;228271;228272;228273 228270 6 MDENQFVAVTSTNAAK Unmodified 1724.8039 0.80394931 2613 Q16555;Q14195;Q14194 DPYSL2;DPYSL3;CRMP1 Dihydropyrimidinase-related protein 2;Dihydropyrimidinase-related protein 3;Dihydropyrimidinase-related protein 1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.91 3.42 2 1 8 1 2 1 1 1 1 1 1 1 1 62.633 61.099 2 4.0839E-23 76305 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.46 107.77 689810000 10058000 617190000 0 0 0 2440300 2608100 3637400 0 3464200 10516000 11200000 0 6026200 22662000 34365 2613 31319 288416;288417;288418;288419;288420;288421;288422;288423;288424;288425;288426 228274;228275;228276;228277;228278;228279;228280;228281;228282;228283 228277 10 MDENQFVAVTSTNAAK Oxidation (M) 1740.7989 0.79886394 2613 Q16555;Q14195;Q14194 DPYSL2;DPYSL3;CRMP1 Dihydropyrimidinase-related protein 2;Dihydropyrimidinase-related protein 3;Dihydropyrimidinase-related protein 1 yes no 0 1 0 By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.33 2 2 11 2 2 1 1 1 1 1 1 1 1 1 1 1 53.66 52.154 2 3.3457E-61 65345 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 181.44 157.1 106830000 5082600 46054000 0 2259600 1310100 0 2239500 1968300 2557200 3928500 7400000 10648000 3318700 5826200 14241000 34366 2613 31319 288427;288428;288429;288430;288431;288432;288433;288434;288435;288436;288437;288438;288439;288440;288441 228284;228285;228286;228287;228288;228289;228290;228291 228284 4267 8 MDEPSPLAQPLELNQHSR Acetyl (Protein N-term) 2103.0055 0.0055026685 2231 Q13085 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes yes 1 0 0 By MS/MS By MS/MS By matching By matching By matching By matching 8.67 2.98 1 5 1 1 1 1 1 1 82.276 81.586 2 1.9347E-76 100093 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 180.84 168.07 55643000 0 39257000 0 0 0 2141400 0 0 0 2620500 2640100 0 1883700 0 7100600 34367 2231 31320 288442;288443;288444;288445;288446;288447 228292;228293;228294 228294 3 MDEPSPLAQPLELNQHSR Acetyl (Protein N-term);Oxidation (M) 2119.0004 0.0004172906 2231 Q13085 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes yes 1 1 0 By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 76.84 76.491 2 6.6281E-64 93718 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 161.21 153.86 105570000 0 43378000 0 3026200 2076100 7445900 5579800 2730900 0 7707400 6972500 9648800 4785000 5283200 6936700 34368 2231 31320 288448;288449;288450;288451;288452;288453;288454;288455;288456;288457;288458;288459 228295;228296;228297;228298;228299 228296 3625 5 MDEQAGPGVFFSNNHPGAGGAK Acetyl (Protein N-term);Oxidation (M) 2244.9858 0.98582986 371 O43815 STRN Striatin yes yes 1 1 0 By MS/MS By MS/MS By matching By matching 8.25 3.03 1 3 1 1 1 1 72.952 72.174 3 9.8499E-05 82947 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 40.381 38.81 23438000 0 7009300 0 0 0 0 4703100 4486200 0 7239000 0 0 0 0 0 34369 371 31321 288460;288461;288462;288463 228300;228301 228300 468 2 MDEQALLGLNPNADSDFR Acetyl (Protein N-term) 2046.9317 0.93166902 344 O43592 XPOT Exportin-T yes yes 1 0 0 By MS/MS 10 0 1 1 92.964 93.102 2 1.6334E-05 107944 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.65 54.599 1449800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1449800 34370 344 31322 288464 228302 228302 1 MDEQALLGLNPNADSDFR Acetyl (Protein N-term);Oxidation (M) 2062.9266 0.92658365 344 O43592 XPOT Exportin-T yes yes 1 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 87.399 87.527 2 2.8937E-06 100731 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 70.412 65.028 6223700 0 0 0 0 0 0 0 2065000 0 0 0 0 1172200 2986500 0 34371 344 31322 288465;288466;288467 228303;228304 228303 428 2 MDEQALLGLNPNADSDFRQR Acetyl (Protein N-term);Oxidation (M) 2347.0863 0.086272185 344 O43592 XPOT Exportin-T yes yes 1 1 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 81.582 81.692 3 2.015E-12 94437 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 84.035 80.083 25930000 0 0 0 0 0 5664900 0 0 0 0 5392400 8184900 2560400 4127700 0 34372 344 31323 288468;288469;288470;288471;288472 228305;228306;228307;228308 228305 428 4 MDEQALLGLNPNADSDFRQR Acetyl (Protein N-term) 2331.0914 0.091357563 344 O43592 XPOT Exportin-T yes yes 1 0 1 By MS/MS 10 0 1 1 87.03 87.189 3 0.00074507 100832 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.816 41.807 2987200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2987200 34373 344 31323 288473 228309 228309 1 MDETDASSAVK Oxidation (M) 1168.4918 0.49178288 2242 Q13148 TARDBP TAR DNA-binding protein 43 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.34 1 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 19.067 19.051 2 8.6682E-05 11915 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 109.66 98.954 485070000 27286000 5323500 0 24778000 27034000 41614000 46528000 38191000 31808000 51957000 36799000 34105000 43344000 30832000 45468000 34374 2242 31324 288474;288475;288476;288477;288478;288479;288480;288481;288482;288483;288484;288485;288486;288487;288488 228310;228311;228312;228313;228314;228315;228316;228317;228318;228319;228320;228321;228322;228323;228324 228311 3643 15 MDETDASSAVK Unmodified 1152.4969 0.49686826 2242 Q13148 TARDBP TAR DNA-binding protein 43 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21.507 21.049 2 1.9273E-05 22435 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 125.48 111.9 1732900000 14791000 16674000 0 73025000 83695000 147660000 147870000 101110000 103870000 151980000 201040000 121740000 142950000 170250000 256240000 34375 2242 31324 288489;288490;288491;288492;288493;288494;288495;288496;288497;288498;288499;288500;288501;288502 228325;228326;228327;228328;228329;228330;228331;228332;228333;228334;228335;228336;228337;228338;228339;228340 228325 16 MDETGMVHCDTAVGTPDYISPEVLK 2 Oxidation (M) 2796.2292 0.22923253 455 O75116 ROCK2 Rho-associated protein kinase 2 yes yes 0 2 0 By MS/MS 2.5 0.5 1 1 2 79.159 75.117 3 9.1998E-19 93403 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.062 81.847 132190000 0 132190000 0 0 0 0 0 0 0 0 0 0 0 0 0 34376 455 31325 288503;288504 228341;228342 228341 579;580 2 MDETGMVHCDTAVGTPDYISPEVLK Oxidation (M) 2780.2343 0.23431791 455 O75116 ROCK2 Rho-associated protein kinase 2 yes yes 0 1 0 By MS/MS 2.33 0.471 2 1 3 81.778 77.542 3 5.1378E-31 97232 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.53 97.727 231710000 0 231710000 0 0 0 0 0 0 0 0 0 0 0 0 0 34377 455 31325 288505;288506;288507 228343;228344;228345;228346;228347;228348 228345 579;580 6 MDETGMVHCDTAVGTPDYISPEVLK Unmodified 2764.2394 0.23940329 455 O75116 ROCK2 Rho-associated protein kinase 2 yes yes 0 0 0 By MS/MS 2 0 1 1 84.316 79.573 3 5.4478E-06 98854 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.68 61.112 175270000 0 175270000 0 0 0 0 0 0 0 0 0 0 0 0 0 34378 455 31325 288508 228349 228349 1 MDEVLYSIAEK Oxidation (M) 1312.6221 0.62206877 2007 P83876 TXNL4A Thioredoxin-like protein 4A yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 65.73 64.995 2 0.00052974 82010 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.044 78.267 76691000 0 54114000 0 2893400 0 0 0 3141200 0 0 4476600 0 3201000 3198700 5665400 34379 2007 31326 288509;288510;288511;288512;288513;288514;288515 228350;228351;228352;228353;228354 228350 3258 5 MDEVLYSIAEK Unmodified 1296.6272 0.62715415 2007 P83876 TXNL4A Thioredoxin-like protein 4A yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 77.887 73.112 2 0.00095932 91167 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.058 65.943 92167000 0 92167000 0 0 0 0 0 0 0 0 0 0 0 0 0 34380 2007 31326 288516;288517 228355;228356;228357 228356 3 MDEYVASLHLPSFDAHLTELTDDQAK Oxidation (M) 2961.3702 0.37021776 377 O43865 AHCYL1 Putative adenosylhomocysteinase 2 yes yes 0 1 0 By MS/MS 2 0 1 1 93.553 85.423 4 3.3243E-05 110599 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 44.483 34.364 17816000 17816000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34381 377 31327 288518 228358 228358 480 1 MDEYVASLHLPSFDAHLTELTDDQAK Unmodified 2945.3753 0.37530314 377 O43865 AHCYL1 Putative adenosylhomocysteinase 2 yes yes 0 0 0 By MS/MS 2 0 1 1 94.847 86.717 4 8.1487E-06 112152 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.605 47.956 33425000 33425000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34382 377 31327 288519 228359 228359 1 MDFEDDYTHSACR Acetyl (Protein N-term) 1687.6243 0.62427039 2721 Q5BKZ1 ZNF326 DBIRD complex subunit ZNF326 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 66.971 67.201 2 1.1236E-07 76169 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 91.937 91.532 33464000 0 0 0 0 0 1824300 0 2130000 0 3641600 3688400 5613800 4164100 4330200 8072100 34383 2721 31328 288520;288521;288522;288523;288524;288525;288526;288527 228360;228361;228362;228363;228364;228365;228366;228367 228365 8 MDFEDDYTHSACR Acetyl (Protein N-term);Oxidation (M) 1703.6192 0.61918501 2721 Q5BKZ1 ZNF326 DBIRD complex subunit ZNF326 yes yes 1 1 0 By MS/MS By MS/MS 10 0 2 1 1 51.68 51.932 2 1.8936E-06 58869 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 90.653 89.402 10907000 0 0 0 0 0 0 0 0 0 0 0 0 6863200 4044100 0 34384 2721 31328 288528;288529 228368;228369 228369 4367 2 MDFLLGNPFSSPVGQR Acetyl (Protein N-term);Oxidation (M) 1821.872 0.8719693 431 O60784 TOM1 Target of Myb protein 1 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 96.64 96.768 2 2.1461E-08 112561 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 87.001 80.341 11207000 0 0 0 0 0 687890 0 640160 0 3043200 1689900 1667300 0 1034700 2444300 34385 431 31329 288530;288531;288532;288533;288534;288535;288536 228370;228371;228372;228373;228374;228375;228376;228377 228372 551 8 MDFQHRPGGK Acetyl (Protein N-term) 1213.5662 0.56622565 2534 Q15428 SF3A2 Splicing factor 3A subunit 2 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 5 20 2 1 2 2 2 2 2 1 2 2 1 1 2 2 1 34.995 34.077 2;3 0.0057204 43096 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 62.303 62.303 1328700000 631430000 31668000 37790000 30982000 34350000 36713000 39941000 39287000 28921000 51280000 78649000 77454000 51700000 69476000 89016000 34386 2534 31330 288537;288538;288539;288540;288541;288542;288543;288544;288545;288546;288547;288548;288549;288550;288551;288552;288553;288554;288555;288556;288557;288558;288559;288560;288561 228378;228379;228380;228381;228382;228383;228384;228385;228386;228387 228384 2 MDFQHRPGGK Acetyl (Protein N-term);Oxidation (M) 1229.5611 0.56114027 2534 Q15428 SF3A2 Splicing factor 3A subunit 2 yes yes 1 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8 3.46 6 18 2 2 2 2 2 1 2 2 1 2 1 1 1 1 2 18.779 17.935 2;3 0.0010017 25346 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 111.17 98.179 842300000 272430000 86589000 108860000 33437000 38775000 5799900 42138000 35512000 3467300 39999000 6128400 58969000 44548000 4618700 61024000 34387 2534 31330 288562;288563;288564;288565;288566;288567;288568;288569;288570;288571;288572;288573;288574;288575;288576;288577;288578;288579;288580;288581;288582;288583;288584;288585 228388;228389;228390;228391;228392;228393;228394;228395;228396;228397;228398;228399;228400;228401;228402;228403;228404;228405;228406 228399 4170 10 MDFSRNLYDIGEQLDSEDLASLK Acetyl (Protein N-term) 2700.2589 0.2588764 2447 Q14790 CASP8 Caspase-8;Caspase-8 subunit p18;Caspase-8 subunit p10 yes yes 1 0 1 By MS/MS By MS/MS 2 0 2 1 1 99.522 93.101 3 2.6205E-11 117432 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.19 69.997 36586000 7386100 29200000 0 0 0 0 0 0 0 0 0 0 0 0 0 34388 2447 31331 288586;288587 228407;228408;228409 228407 3 MDFTAQPK Acetyl (Protein N-term) 978.44807 0.44806757 2647 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.31 2.4 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 64.78 65.277 2 0.0068424 90097 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 77.058 62.394 59901000 10553000 0 0 2037800 2078400 4693700 2722700 4034700 2299600 5229100 5817700 5692600 3751300 4543100 6447000 34389 2647 31332 288588;288589;288590;288591;288592;288593;288594;288595;288596;288597;288598;288599;288600 228410;228411 228411 2 MDFTAQPK Acetyl (Protein N-term);Oxidation (M) 994.44298 0.44298219 2647 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 1 1 0 By MS/MS 1 0 1 1 102.14 107.4 2 0.020461 87207 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 63.48 49.808 5073700 5073700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34390 2647 31332 288601 228412 228412 1 MDGGDDGNLIIK Acetyl (Protein N-term);Oxidation (M) 1304.5918 0.59183127 4308 Q9GZU8 FAM192A Protein FAM192A yes yes 1 1 0 By MS/MS 1 0 1 1 103.31 108.57 2 1.4561E-07 88608 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 117.7 104.32 12109000 12109000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34391 4308 31333 288602 228413 228413 5767 1 MDGIVPDIAVGTK Acetyl (Protein N-term);Oxidation (M) 1372.6908 0.69081704 1208 P26599 PTBP1 Polypyrimidine tract-binding protein 1 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.87 3.56 1 2 1 11 2 2 1 1 1 1 1 1 1 1 1 1 1 83.773 83.125 2 1.2328E-12 93922 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 122.51 110.46 1668100000 304790000 54423000 0 0 73574000 101820000 107010000 72841000 90315000 140710000 125940000 131610000 92404000 129630000 243050000 34392 1208 31334 288603;288604;288605;288606;288607;288608;288609;288610;288611;288612;288613;288614;288615;288616;288617 228414;228415;228416;228417;228418;228419;228420;228421;228422;228423;228424;228425;228426;228427;228428 228425 1765 15 MDGIVPDIAVGTK Acetyl (Protein N-term) 1356.6959 0.69590241 1208 P26599 PTBP1 Polypyrimidine tract-binding protein 1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.1 2.7 1 9 1 1 1 1 1 1 1 1 1 1 92.122 92.743 2 2.0396E-08 105807 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 100.55 90.6 729090000 348980000 0 0 0 29996000 45509000 30573000 38054000 29986000 66401000 55580000 45007000 39014000 0 0 34393 1208 31334 288618;288619;288620;288621;288622;288623;288624;288625;288626;288627 228429;228430;228431;228432;228433;228434;228435;228436;228437;228438;228439;228440;228441 228438 13 MDGIVPDIAVGTKR Acetyl (Protein N-term);Oxidation (M) 1528.7919 0.79192806 1208 P26599 PTBP1 Polypyrimidine tract-binding protein 1 yes yes 1 1 1 By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 6 1 1 1 1 1 1 75.87 75.853 2 0.0026146 87425 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 51.286 42.098 40334000 0 0 0 4503800 4664600 0 6901000 0 0 0 7501100 11325000 0 5437900 0 34394 1208 31335 288628;288629;288630;288631;288632;288633 228442;228443;228444 228442 1765 3 MDGIVTEVAVGVK Acetyl (Protein N-term) 1358.7116 0.71155248 4960 Q9UKA9 PTBP2 Polypyrimidine tract-binding protein 2 yes yes 1 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 94.46 90.408 2 5.5532E-05 112337 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.77 98.541 46438000 0 46438000 0 0 0 0 0 0 0 0 0 0 0 0 0 34395 4960 31336 288634;288635;288636 228445;228446;228447;228448 228446 4 MDGLLNPRESSK Acetyl (Protein N-term) 1387.6766 0.67656396 2780 Q5T6V5 C9orf64 UPF0553 protein C9orf64 yes yes 1 0 1 By MS/MS 2.5 0.5 1 1 2 74.136 69.693 2 0.00057076 87701 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.9 76.309 69927000 0 69927000 0 0 0 0 0 0 0 0 0 0 0 0 0 34396 2780 31337 288637;288638 228449;228450;228451 228449 3 MDGMTIK Unmodified 794.36665 0.36664613 2475 Q15020 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes yes 0 0 0 By MS/MS 2 0 1 1 35.531 30.684 2 0.03416 40276 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.265 50.373 46163000 0 46163000 0 0 0 0 0 0 0 0 0 0 0 0 0 34397 2475 31338 288639 228452;228453 228453 2 MDGPVAEHAK Acetyl (Protein N-term) 1095.5019 0.50189405 3851 Q96GA7 SDSL Serine dehydratase-like yes yes 1 0 0 By MS/MS 2 0 1 1 36.519 31.672 2 0.0057661 41305 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 61.78 44.394 11771000 0 11771000 0 0 0 0 0 0 0 0 0 0 0 0 0 34398 3851 31339 288640 228454 228454 1 MDGRVQLIK Acetyl (Protein N-term) 1100.6012 0.60121417 33 A6ZKI3 FAM127A Protein FAM127A yes yes 1 0 1 By MS/MS 2 0 1 1 70.744 64.928 2 0.047475 82451 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 50.805 14.409 32465000 0 32465000 0 0 0 0 0 0 0 0 0 0 0 0 0 34399 33 31340 288641 228455 228455 1 MDGSGEQPR Acetyl (Protein N-term) 1017.4186 0.41855836 2140 Q07812 BAX Apoptosis regulator BAX yes yes 1 0 0 By MS/MS By matching By matching By MS/MS 10 0 4 1 1 1 1 21.974 22.258 2 0.0044359 22430 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.35 25.799 13523000 0 0 0 0 0 4615900 0 1215500 0 0 0 0 0 2764900 4926400 34400 2140 31341 288642;288643;288644;288645 228456;228457 228457 2 MDGSGEQPRGGGPTSSEQIMK Acetyl (Protein N-term) 2189.9681 0.96813088 2140 Q07812 BAX Apoptosis regulator BAX yes yes 1 0 1 By MS/MS 2 0 2 2 54.636 48.83 2;3 9.2784E-09 63397 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.481 89.429 40854000 0 40854000 0 0 0 0 0 0 0 0 0 0 0 0 0 34401 2140 31342 288646;288647 228458;228459 228459 2 MDGTRTSLDIEEYSDTEVQK Acetyl (Protein N-term) 2358.0533 0.053300302 1661 P51580 TPMT Thiopurine S-methyltransferase yes yes 1 0 1 By MS/MS 2 0 2 2 79.628 74.916 2;3 2.1177E-10 93273 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.972 82.582 56662000 0 56662000 0 0 0 0 0 0 0 0 0 0 0 0 0 34402 1661 31343 288648;288649 228460;228461 228460 2 MDGTRTSLDIEEYSDTEVQK Acetyl (Protein N-term);Oxidation (M) 2374.0482 0.048214924 1661 P51580 TPMT Thiopurine S-methyltransferase yes yes 1 1 1 By MS/MS 2 0 1 1 73.926 68.771 2 4.2378E-07 86457 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 54.501 24.442 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34403 1661 31343 288650 228462 228462 2672 1 MDGTTTIASR Oxidation (M) 1067.4917 0.4917233 2097 Q03468 ERCC6 DNA excision repair protein ERCC-6 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 15.163 15.328 2 0.0079521 15060 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 53.124 38.342 44078000 0 0 0 3045700 3434900 2894800 3600600 3333000 3424500 3618000 4658100 4531200 0 5720700 5817000 34404 2097 31344 288651;288652;288653;288654;288655;288656;288657;288658;288659;288660;288661 228463;228464;228465;228466;228467;228468;228469;228470;228471;228472 228465 3394 10 MDGTTTIASR Unmodified 1051.4968 0.49680868 2097 Q03468 ERCC6 DNA excision repair protein ERCC-6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.057 23.251 2 0.0015746 24843 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 90.15 57.68 62245000 0 0 0 4148900 3868800 5706900 3339100 4211300 2258700 6290600 6030200 7860400 8463600 0 10066000 34405 2097 31344 288662;288663;288664;288665;288666;288667;288668;288669;288670;288671;288672;288673 228473;228474;228475;228476;228477;228478;228479;228480;228481;228482;228483;228484 228484 12 MDGVVTDLITVGLK Acetyl (Protein N-term) 1501.8062 0.80618115 687 O95758 PTBP3 Polypyrimidine tract-binding protein 3 yes yes 1 0 0 By MS/MS 2 0 1 1 102.97 98.239 2 0.0026194 121380 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.942 51.626 5816900 0 5816900 0 0 0 0 0 0 0 0 0 0 0 0 0 34406 687 31345 288674 228485 228485 1 MDHLMTK Unmodified 874.40409 0.40409427 2768 Q5T1M5 FKBP15 FK506-binding protein 15 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 19.886 16.176 2 0.024927 23783 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.41 48.227 35254000 26641000 0 8613600 0 0 0 0 0 0 0 0 0 0 0 0 34407 2768 31346 288675;288676 228486 228486 1 MDIDAPDVDVHGPDWHLK Unmodified 2058.9469 0.94692516 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 83.098 76.107 3;4 0.0017112 97435 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 47.204 37.799 68600000 54429000 14170000 0 0 0 0 0 0 0 0 0 0 0 0 0 34408 2172 31347 288677;288678;288679 228487;228488;228489 228487 2 MDIDAPDVDVHGPDWHLK Oxidation (M) 2074.9418 0.94183978 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 1 0 By MS/MS 2 0 1 1 79.052 70.922 4 9.0393E-05 93176 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.477 50.438 15587000 15587000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34409 2172 31347 288680 228490 228490 3527 1 MDIDVPDVEVQGPDWHLK Unmodified 2091.9935 0.993541 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS 2 0 1 1 90.777 82.647 3 6.6882E-06 107280 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.16 77.502 15768000 15768000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34410 2172 31348 288681 228491 228491 1 MDIDVPDVEVQGPDWHLK Oxidation (M) 2107.9885 0.98845562 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 1 0 By MS/MS 2 0 1 1 86.858 78.728 3 1.9744E-05 102565 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.287 81.745 7412900 7412900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34411 2172 31348 288682 228492 228492 3528 0 MDIETNDTFSDEAVPESSK Unmodified 2113.8998 0.89975977 448 O60934 NBN Nibrin yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 66.575 66.814 2 1.1584E-46 75987 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 127.71 118.42 36802000 0 0 0 0 0 2491500 0 2660700 1786600 4377200 6519500 6006600 0 3757700 9202200 34412 448 31349 288683;288684;288685;288686;288687;288688;288689;288690 228493;228494;228495;228496;228497;228498 228495 6 MDILVTETEELAENILK Unmodified 1960.0075 0.0074597284 4686 Q9NVX0 HAUS2 HAUS augmin-like complex subunit 2 yes yes 0 0 0 By MS/MS 2 0 1 1 102.86 94.734 3 0.0045225 121867 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 33.872 28.661 5968300 5968300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34413 4686 31350 288691 228499 228499 1 MDIRPNHTIYINNMNDK Acetyl (Protein N-term);Oxidation (M) 2145.9936 0.99355777 866 P08579 SNRPB2 U2 small nuclear ribonucleoprotein B'' yes yes 1 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 2 14 1 1 1 1 1 1 1 1 1 2 2 1 2 62.159 61.599 3 2.9092E-14 67164 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.01 90.016 201950000 33246000 0 16287000 0 2607200 6658900 7015700 7900800 6863700 11716000 11080000 33315000 16297000 10294000 38672000 34414 866 31351 288692;288693;288694;288695;288696;288697;288698;288699;288700;288701;288702;288703;288704;288705;288706;288707 228500;228501;228502;228503;228504;228505;228506;228507;228508;228509;228510;228511;228512;228513;228514;228515 228502 1109;1110 16 MDIRPNHTIYINNMNDK Acetyl (Protein N-term);2 Oxidation (M) 2161.9885 0.9884724 866 P08579 SNRPB2 U2 small nuclear ribonucleoprotein B'' yes yes 1 2 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 51.82 50.712 3 4.5553E-15 57501 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 97.284 88.64 340710000 28334000 0 20108000 25439000 32848000 0 28581000 31646000 0 0 0 41857000 50426000 36128000 45347000 34415 866 31351 288708;288709;288710;288711;288712;288713;288714;288715;288716;288717;288718 228516;228517;228518;228519;228520;228521;228522;228523;228524;228525;228526;228527;228528;228529;228530;228531 228523 1109;1110 16 MDIRPNHTIYINNMNDK Acetyl (Protein N-term) 2129.9986 0.99864315 866 P08579 SNRPB2 U2 small nuclear ribonucleoprotein B'' yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.8 3.92 2 3 1 1 1 1 1 73.897 71.837 3 1.9751E-13 92487 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.98 93.723 97674000 56116000 0 3382900 0 0 0 0 0 0 0 0 0 3109200 7569600 27496000 34416 866 31351 288719;288720;288721;288722;288723 228532;228533;228534;228535;228536;228537 228534 6 MDKNELVQK Acetyl (Protein N-term);Oxidation (M) 1161.57 0.56997362 1940 P63104 YWHAZ 14-3-3 protein zeta/delta yes yes 1 1 1 By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 21.092 21.419 2 0.0053933 21840 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 64.654 42.568 36734000 0 0 0 2612100 0 0 3162400 0 0 0 6200000 13825000 2031900 2781300 6121500 34417 1940 31352 288724;288725;288726;288727;288728;288729;288730 228538;228539 228539 3119 2 MDLAAAAEPGAGSQHLEVRDEVAEK Acetyl (Protein N-term);Oxidation (M) 2651.2497 0.2497087 2415 Q14566 MCM6 DNA replication licensing factor MCM6 yes yes 1 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 68.365 67.056 3 8.6656E-108 84901 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 149.18 145.52 738860000 62684000 458920000 44994000 3531300 6429400 14882000 8452900 9117500 10090000 20210000 21433000 23270000 13081000 14162000 27607000 34418 2415 31353 288731;288732;288733;288734;288735;288736;288737;288738;288739;288740;288741;288742;288743;288744;288745;288746 228540;228541;228542;228543;228544;228545;228546;228547;228548;228549;228550;228551;228552;228553;228554;228555;228556;228557 228545 3969 18 MDLAAAAEPGAGSQHLEVRDEVAEK Acetyl (Protein N-term) 2635.2548 0.25479408 2415 Q14566 MCM6 DNA replication licensing factor MCM6 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 77.795 75.775 3 9.9759E-108 95835 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 150.72 143.77 481350000 105160000 340030000 0 0 0 0 0 0 0 6451800 6242800 0 0 5685300 17783000 34419 2415 31353 288747;288748;288749;288750;288751;288752 228558;228559;228560;228561;228562;228563 228561 6 MDLAPSK Oxidation (M) 776.37384 0.37383999 1226 P27816 MAP4 Microtubule-associated protein 4 yes no 0 1 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 2 1 12.037 11.534 2 0.031558 10049 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 65.252 41.28 236940000 16802000 92712000 3772900 5041200 7687700 0 8857200 5303000 7281000 11259000 9732000 19869000 13263000 19986000 15369000 34420 1226 31354 288753;288754;288755;288756;288757;288758;288759;288760;288761;288762;288763;288764;288765;288766;288767 228564;228565;228566;228567 228567 4 MDLDEDTAEK Unmodified 1165.4809 0.48088384 1787 P56937 HSD17B7 3-keto-steroid reductase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.825 30.063 2 0.0016946 32519 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 94.692 68.308 64129000 0 0 0 0 5301500 4235800 4182400 4954400 3971400 5944000 7656000 8413700 6594500 5368100 7507600 34421 1787 31355 288768;288769;288770;288771;288772;288773;288774;288775;288776;288777;288778;288779 228568;228569;228570;228571;228572;228573;228574;228575;228576;228577;228578;228579 228569 12 MDLDEDTAEK Oxidation (M) 1181.4758 0.47579846 1787 P56937 HSD17B7 3-keto-steroid reductase yes yes 0 1 0 By MS/MS 10 0 1 1 16.496 16.753 2 0.030084 16736 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 55.064 37.824 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34422 1787 31355 288780 228580 228580 1 MDLGAITK Acetyl (Protein N-term);Oxidation (M) 905.45282 0.4528186 653 O95394 PGM3 Phosphoacetylglucosamine mutase yes yes 1 1 0 By MS/MS By MS/MS 1 0 2 1 1 106.03 109.11 2 0.022134 88956 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 61.679 17.562 23464000 9423600 14040000 0 0 0 0 0 0 0 0 0 0 0 0 0 34423 653 31356 288781;288782 228581 228581 1 MDLGAITK Acetyl (Protein N-term) 889.4579 0.45790397 653 O95394 PGM3 Phosphoacetylglucosamine mutase yes yes 1 0 0 By MS/MS 1 0 1 1 105.35 110.61 2 0.02642 91077 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 51.193 33.345 34903000 34903000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34424 653 31356 288783 228582 228582 1 MDLGECLK Oxidation (M) 980.4307 0.43070295 5141 Q9Y383 LUC7L2 Putative RNA-binding protein Luc7-like 2 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 34.449 34.596 2 0.024045 37984 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 51.854 25.96 43013000 0 0 0 2476800 3129400 0 3290900 3171400 2751200 4577300 8166200 0 3698600 3591800 8159300 34425 5141 31357 288784;288785;288786;288787;288788;288789;288790;288791;288792;288793 228583;228584;228585 228585 3 MDLGECLK Unmodified 964.43579 0.43578832 5141 Q9Y383 LUC7L2 Putative RNA-binding protein Luc7-like 2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 51.077 50.92 2 0.017826 56376 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 65.038 29.158 44775000 0 0 0 0 13889000 0 0 0 0 0 0 0 0 30886000 0 34426 5141 31357 288794;288795 228586 228586 1 MDLGECTK Unmodified 952.3994 0.39940282 4557 Q9NQ29 LUC7L Putative RNA-binding protein Luc7-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 25.193 25.389 2 0.020746 25658 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.546 41.991 65787000 0 0 0 0 5677800 7205900 4262500 5089400 4866100 6671000 6926600 0 7701500 6980100 10406000 34427 4557 31358 288796;288797;288798;288799;288800;288801;288802;288803;288804;288805 228587 228587 1 MDLLLTK Unmodified 832.47283 0.47282576 2932 Q6P3W7 SCYL2 SCY1-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.067 65.155 2 0.026078 74667 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 79.469 46.998 172830000 0 0 0 9290700 8027700 11009000 12595000 17647000 11997000 15876000 15234000 14988000 14229000 15440000 26498000 34428 2932 31359 288806;288807;288808;288809;288810;288811;288812;288813;288814;288815;288816;288817 228588;228589 228588 2 MDLNSASTVVLQVLTQATSQDTAVLK Acetyl (Protein N-term) 2774.4372 0.43717512 4919 Q9UI26 IPO11 Importin-11 yes yes 1 0 0 By MS/MS 2 0 1 1 106.14 101.39 3 8.6431E-09 125185 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.091 63.558 3028100 0 3028100 0 0 0 0 0 0 0 0 0 0 0 0 0 34429 4919 31360 288818 228590 228590 1 MDLNSASTVVLQVLTQATSQDTAVLKPAEEQLK Acetyl (Protein N-term) 3569.8498 0.84984346 4919 Q9UI26 IPO11 Importin-11 yes yes 1 0 1 By MS/MS 2 0 1 1 105.22 100.47 3 2.7294E-16 124059 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.398 56.652 4497900 0 4497900 0 0 0 0 0 0 0 0 0 0 0 0 0 34430 4919 31361 288819 228591 228591 1 MDLNSEQAEQLER Oxidation (M) 1577.6991 0.69914989 2693 Q52LJ0 FAM98B Protein FAM98B yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 1 2 2 2 2 2 2 1 2 41.059 41.238 2 2.751E-20 46207 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 156.71 131.05 230680000 0 0 0 16845000 14346000 21373000 10353000 19156000 14459000 22603000 27473000 32638000 18215000 9347100 23874000 34431 2693 31362 288820;288821;288822;288823;288824;288825;288826;288827;288828;288829;288830;288831;288832;288833;288834;288835;288836;288837;288838;288839;288840;288841 228592;228593;228594;228595;228596;228597;228598;228599;228600;228601;228602;228603;228604;228605;228606;228607;228608;228609;228610;228611;228612 228603 4348 19 MDLNSEQAEQLER Unmodified 1561.7042 0.70423527 2693 Q52LJ0 FAM98B Protein FAM98B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.455 52.598 2 3.1523E-75 59680 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 194.17 168.51 311850000 0 0 0 29992000 19664000 24850000 22528000 27498000 16890000 42128000 33345000 26174000 15726000 24848000 28206000 34432 2693 31362 288842;288843;288844;288845;288846;288847;288848;288849;288850;288851;288852;288853 228613;228614;228615;228616;228617;228618;228619;228620;228621;228622;228623;228624 228619 12 MDLPVGPGAAGPSNVPAFLTK Acetyl (Protein N-term);Oxidation (M) 2096.0612 0.061226633 2041 Q00613 HSF1 Heat shock factor protein 1 yes yes 1 1 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 2 1 1 2 2 92.09 92.178 2;3 1.6153E-06 106968 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 53.585 44.653 76824000 0 0 0 1545200 3612600 0 3375000 6059700 10008000 0 8447600 0 6745500 11945000 25086000 34433 2041 31363 288854;288855;288856;288857;288858;288859;288860;288861;288862;288863;288864;288865 228625;228626;228627;228628;228629;228630 228628 3304 2 MDLPVGPGAAGPSNVPAFLTK Acetyl (Protein N-term) 2080.0663 0.066312011 2041 Q00613 HSF1 Heat shock factor protein 1 yes yes 1 0 0 By MS/MS By MS/MS 10 0 2 1 1 96.85 96.99 3 7.1438E-05 112588 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.229 39.065 6718800 0 0 0 0 0 0 0 0 0 2116700 0 0 0 0 4602100 34434 2041 31363 288866;288867 228631 228631 1 MDLQAAGAQAQGAAEPSRGPPLPSAR Acetyl (Protein N-term);Oxidation (M) 2604.2714 0.27144719 4562 Q9NQ92 COPRS Coordinator of PRMT5 and differentiation stimulator yes yes 1 1 1 By matching By MS/MS 10 0 2 1 1 68.693 68.645 3 1.7635E-08 78910 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 45.546 41.952 8514200 0 0 0 0 2354000 0 0 0 0 0 0 6160200 0 0 0 34435 4562 31364 288868;288869 228632 228632 5973 1 MDLQIGTEK Unmodified 1033.5114 0.51139611 2456 Q14966 ZNF638 Zinc finger protein 638 yes yes 0 0 0 By MS/MS 10 0 1 1 50.136 50.301 2 0.019889 56898 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 83.998 53.386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34436 2456 31365 288870 228633 228633 1 MDLSASLGEK Unmodified 1049.5063 0.50631073 3017 Q6ZUT9 DENND5B DENN domain-containing protein 5B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 57.831 52 2 0.012711 59057 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.414 46.854 29078000 0 29078000 0 0 0 0 0 0 0 0 0 0 0 0 0 34437 3017 31366 288871;288872;288873 228634;228635;228636 228635 3 MDLSASLGEK Oxidation (M) 1065.5012 0.50122535 3017 Q6ZUT9 DENND5B DENN domain-containing protein 5B yes yes 0 1 0 By MS/MS 2 0 1 1 40.846 35.794 2 0.030333 46664 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 61.78 36.885 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34438 3017 31366 288874 228637 228637 1 MDLSESSK Unmodified 895.3957 0.39569765 2649 Q2KHR3 QSER1 Glutamine and serine-rich protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 17.602 17.809 2 0.035464 17953 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 52.482 27.588 28137000 0 0 0 0 2025200 2979000 0 2637400 2536900 2934900 3927500 0 4125800 2565100 4404900 34439 2649 31367 288875;288876;288877;288878;288879;288880;288881;288882;288883 228638;228639 228638 2 MDLSGVK Acetyl (Protein N-term) 790.38949 0.38949006 2513 Q15287 RNPS1 RNA-binding protein with serine-rich domain 1 yes yes 1 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.545 58.66 1 0.035418 66275 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 104.21 63.523 64329000 0 0 0 2998000 3430900 4659500 3964600 4159400 3197300 4389200 6280100 7311700 8221500 6284100 9433200 34440 2513 31368 288884;288885;288886;288887;288888;288889;288890;288891;288892;288893;288894;288895 228640;228641 228641 0 MDLSGVK Acetyl (Protein N-term);Oxidation (M) 806.3844 0.38440468 2513 Q15287 RNPS1 RNA-binding protein with serine-rich domain 1 yes yes 1 1 0 By MS/MS By matching 10 0 2 1 1 32.638 33.158 1 0.0060344 35884 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.177 35.631 9820600 0 0 0 0 0 0 0 0 0 0 0 6585100 0 3235400 0 34441 2513 31368 288896;288897 228642 228642 4132 1 MDLVTYFGK Oxidation (M) 1088.5212 0.52123251 888 P09543 CNP 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 70.052 70.129 2 0.0034384 80116 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 79.906 60.546 74704000 0 0 0 5099000 4488500 7295200 6239300 4598700 4973100 7014800 6509500 9327100 6754500 5866400 6537600 34442 888 31369 288898;288899;288900;288901;288902;288903;288904;288905;288906;288907;288908;288909;288910 228643;228644;228645;228646;228647;228648;228649;228650;228651;228652;228653;228654;228655;228656 228647 1140 14 MDLVTYFGK Unmodified 1072.5263 0.52631789 888 P09543 CNP 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 80.538 80.227 2 0.0052193 92599 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 79.906 65.124 165360000 0 23695000 0 4446400 5637600 11647000 7742700 11535000 9886500 12001000 16489000 14327000 7638200 12315000 27997000 34443 888 31369 288911;288912;288913;288914;288915;288916;288917;288918;288919;288920;288921;288922;288923 228657;228658;228659;228660;228661;228662;228663;228664;228665;228666 228658 10 MDMEEIIQR Unmodified 1163.5315 0.53147962 4314 Q9H074 PAIP1 Polyadenylate-binding protein-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 70.388 70.521 2 0.0079927 80128 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 82.279 71.406 56743000 0 0 0 0 1621500 3991100 2756300 3278300 0 4925600 7799000 4963200 3346400 4380200 19682000 34444 4314 31370 288924;288925;288926;288927;288928;288929;288930;288931;288932;288933 228667;228668;228669;228670;228671;228672;228673;228674;228675;228676 228673 10 MDMLDPGLDPAASATAAAAASHDK Acetyl (Protein N-term);2 Oxidation (M) 2400.0573 0.057339822 2590 Q15853 USF2 Upstream stimulatory factor 2 yes yes 1 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 76.946 77.006 3 1.3719E-09 88978 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 57.922 54.944 30929000 0 0 0 0 3056300 4146100 4143300 0 3060000 4885300 7028100 0 0 4610000 0 34445 2590 31371 288934;288935;288936;288937;288938;288939;288940 228677;228678;228679;228680;228681;228682;228683;228684 228678 4236;4237 8 MDMLDPGLDPAASATAAAAASHDK Acetyl (Protein N-term) 2368.0675 0.067510578 2590 Q15853 USF2 Upstream stimulatory factor 2 yes yes 1 0 0 By MS/MS 2 0 2 2 93.8 88.904 2;3 7.5296E-47 110348 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 139.04 134.41 51710000 0 51710000 0 0 0 0 0 0 0 0 0 0 0 0 0 34446 2590 31371 288941;288942 228685;228686 228686 2 MDMSLDDIIK 2 Oxidation (M) 1211.5414 0.54137561 3162 Q86V81 ALYREF THO complex subunit 4 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.43 3.02 1 2 11 1 2 1 1 1 1 1 1 1 1 1 1 1 65.73 64.651 2 8.4539E-05 74617 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 129.1 108.2 501960000 659690 122410000 0 28586000 28814000 28162000 46664000 25323000 46024000 39495000 37249000 46620000 29129000 22818000 0 34447 3162 31372 288943;288944;288945;288946;288947;288948;288949;288950;288951;288952;288953;288954;288955;288956 228687;228688;228689;228690;228691;228692;228693;228694;228695;228696;228697;228698;228699;228700 228700 4779;4780 9 MDMSLDDIIK Unmodified 1179.5515 0.55154636 3162 Q86V81 ALYREF THO complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84.64 83.665 2 0.00039375 103535 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.89 101.69 903610000 31887000 449420000 3596700 16843000 28265000 37024000 26869000 43962000 28083000 39479000 41118000 41923000 14717000 26583000 73843000 34448 3162 31372 288957;288958;288959;288960;288961;288962;288963;288964;288965;288966;288967;288968;288969;288970;288971 228701;228702;228703;228704;228705;228706;228707;228708;228709;228710;228711;228712;228713;228714;228715 228705 15 MDMSLDDIIK Oxidation (M) 1195.5465 0.54646099 3162 Q86V81 ALYREF THO complex subunit 4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.79 2.83 5 1 33 1 4 1 3 3 3 3 2 3 2 3 3 3 3 2 74.553 73.675 2 0.0016626 83703 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 82.749 72.039 845430000 15085000 435370000 1753600 31114000 50388000 28849000 22802000 29477000 45262000 42830000 34428000 47531000 21091000 23189000 16262000 34449 3162 31372 288972;288973;288974;288975;288976;288977;288978;288979;288980;288981;288982;288983;288984;288985;288986;288987;288988;288989;288990;288991;288992;288993;288994;288995;288996;288997;288998;288999;289000;289001;289002;289003;289004;289005;289006;289007;289008;289009;289010 228716;228717;228718;228719;228720;228721;228722;228723;228724;228725;228726;228727;228728;228729;228730;228731;228732;228733;228734;228735;228736;228737;228738;228739;228740;228741;228742;228743;228744;228745 228743 4779;4780 23 MDMTSPEQSR 2 Oxidation (M) 1212.4751 0.47508696 3897 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.7669 6.8905 2 0.00062355 4371 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 99.653 88.943 34629000 0 0 0 2508700 2173800 2072000 2623600 1607000 2378600 3852700 3808000 2642500 3845200 3635800 3481100 34450 3897 31373 289011;289012;289013;289014;289015;289016;289017;289018;289019;289020;289021;289022 228746;228747;228748;228749;228750;228751;228752;228753;228754;228755;228756 228749 5399;5400 11 MDNLSDTLK Acetyl (Protein N-term);Oxidation (M) 1093.4961 0.49613997 1685 P52306 RAP1GDS1 Rap1 GTPase-GDP dissociation stimulator 1 yes yes 1 1 0 By MS/MS 1 0 1 1 102.79 108.06 2 0.00675 88000 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 76.827 45.523 4116500 4116500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34451 1685 31374 289023 228757 228757 2729 1 MDNLSDTLK Acetyl (Protein N-term) 1077.5012 0.50122535 1685 P52306 RAP1GDS1 Rap1 GTPase-GDP dissociation stimulator 1 yes yes 1 0 0 By MS/MS 1 0 1 1 104.6 105.49 2 0.0022217 97169 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 87.308 77.321 6671700 0 6671700 0 0 0 0 0 0 0 0 0 0 0 0 0 34452 1685 31374 289024 228758 228758 1 MDNLSSEEIQQR Acetyl (Protein N-term) 1490.6671 0.66712148 122 O00161 SNAP23 Synaptosomal-associated protein 23 yes yes 1 0 0 By MS/MS 10 0 1 1 63.767 64.331 2 7.9141E-05 72907 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.015 80.749 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34453 122 31375 289025 228759 228759 1 MDPLSELQDDLTLDDTSEALNQLK Acetyl (Protein N-term) 2745.2902 0.29023611 2146 Q07960 ARHGAP1 Rho GTPase-activating protein 1 yes yes 1 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 101.04 95.594 3 7.631E-16 119268 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.548 68.278 41161000 5583000 35578000 0 0 0 0 0 0 0 0 0 0 0 0 0 34454 2146 31376 289026;289027;289028 228760;228761 228760 2 MDPLSELQDDLTLDDTSEALNQLK Acetyl (Protein N-term);Oxidation (M) 2761.2852 0.28515073 2146 Q07960 ARHGAP1 Rho GTPase-activating protein 1 yes yes 1 1 0 By MS/MS 3 0 1 1 99.319 95.968 3 3.865E-05 115125 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 59.356 57.19 6108100 0 6108100 0 0 0 0 0 0 0 0 0 0 0 0 0 34455 2146 31376 289029 228762 228762 3452 1 MDPMNIWDDIITNR 2 Oxidation (M) 1764.7811 0.78110538 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 2 0 By MS/MS 10 0 1 1 88.504 88.654 2 0.00051307 102613 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.019 42.329 2801400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2801400 34456 1986 31377 289030 228763 228763 3222;3223 1 MDPNTIIEALR Acetyl (Protein N-term);Oxidation (M) 1329.6599 0.65985126 649 O95373 IPO7 Importin-7 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 88.669 88.74 2 1.9499E-06 102849 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 135.43 124.28 236800000 0 0 0 9107900 15392000 38501000 15514000 10248000 10316000 32798000 20133000 21823000 13694000 18430000 30840000 34457 649 31378 289031;289032;289033;289034;289035;289036;289037;289038;289039;289040;289041;289042 228764;228765;228766;228767;228768;228769;228770;228771;228772;228773;228774;228775;228776;228777 228772 793 14 MDPNTIIEALR Acetyl (Protein N-term) 1313.6649 0.66493664 649 O95373 IPO7 Importin-7 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 97.636 97.735 2 0.00010274 113771 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 103.7 96.805 58403000 0 0 0 0 2958900 3236300 1580500 0 1305700 7520600 5493100 5258100 1643300 5694200 23712000 34458 649 31378 289043;289044;289045;289046;289047;289048;289049;289050;289051;289052;289053 228778;228779;228780;228781;228782;228783;228784;228785;228786;228787;228788;228789;228790;228791;228792 228780 15 MDPQRSPLLEVK Acetyl (Protein N-term);Oxidation (M) 1469.7548 0.75481428 4199 Q9BW19 KIFC1 Kinesin-like protein KIFC1 yes yes 1 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.12 2.32 1 7 1 1 1 1 1 1 1 1 63.123 62.664 2 0.0012553 71743 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 63.283 37.897 35960000 0 3730100 0 0 4843400 3675700 0 0 0 4827700 0 5527900 4380800 3488200 5486200 34459 4199 31379 289054;289055;289056;289057;289058;289059;289060;289061 228793;228794;228795;228796;228797;228798;228799 228793 5676 7 MDPQRSPLLEVK Acetyl (Protein N-term) 1453.7599 0.75989966 4199 Q9BW19 KIFC1 Kinesin-like protein KIFC1 yes yes 1 0 1 By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 75.956 76.007 2 0.015033 87639 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 44.203 15.476 22677000 0 0 0 0 1920600 2482800 2996200 0 0 4606700 0 5014800 2375300 3280800 0 34460 4199 31379 289062;289063;289064;289065;289066;289067;289068;289069;289070 228800;228801;228802 228800 3 MDPSDFPSPFDPLTLPEK Acetyl (Protein N-term);Oxidation (M) 2089.9554 0.95542416 2390 Q14202 ZMYM3 Zinc finger MYM-type protein 3 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 96.848 96.985 2 2.3978E-08 112827 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 80.522 75.038 27135000 0 0 0 0 0 0 1548300 0 0 5965600 3758900 5261900 0 2586600 8014100 34461 2390 31380 289071;289072;289073;289074;289075;289076 228803;228804;228805;228806;228807;228808;228809 228803 3885 7 MDPSDFPSPFDPLTLPEK Acetyl (Protein N-term) 2073.9605 0.96050954 2390 Q14202 ZMYM3 Zinc finger MYM-type protein 3 yes yes 1 0 0 By MS/MS 2 0 1 1 100.17 95.454 2 2.9888E-05 117989 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.08 92.31 64115000 0 64115000 0 0 0 0 0 0 0 0 0 0 0 0 0 34462 2390 31380 289077 228810 228810 1 MDPVAYRVK Unmodified 1077.5641 0.56410038 1528 P47897 QARS Glutamine--tRNA ligase yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 42.115 36.913 2 0.028488 51152 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 113.7 98.328 72446000 59869000 0 12576000 0 0 0 0 0 0 0 0 0 0 0 0 34463 1528 31381 289078;289079 228811;228812;228813 228812 3 MDPVAYRVK Oxidation (M) 1093.559 0.559015 1528 P47897 QARS Glutamine--tRNA ligase yes yes 0 1 1 By MS/MS 2 0 1 1 32.198 26.354 2 0.046727 36948 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.81 99.086 35308000 35308000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34464 1528 31381 289080 228814 228814 0 MDPVNNINVDK Oxidation (M) 1273.5973 0.597251 1638 P50851 LRBA Lipopolysaccharide-responsive and beige-like anchor protein yes yes 0 1 0 By matching By matching By MS/MS By matching By matching By matching 10 0 6 1 1 1 1 1 1 37.126 37.337 2 0.01087 41322 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 44.309 32.819 16940000 0 0 0 0 0 3429100 2251500 2551000 1274100 2611000 0 4822900 0 0 0 34465 1638 31382 289081;289082;289083;289084;289085;289086 228815 228815 2629 1 MDQCVTVERELEK Acetyl (Protein N-term);Oxidation (M) 1693.7651 0.76512097 4446 Q9H871 RMND5A Protein RMD5 homolog A yes yes 1 1 1 By MS/MS 2 0 1 1 63.496 57.588 2 3.5282E-35 74009 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 178.95 154.1 51859000 0 51859000 0 0 0 0 0 0 0 0 0 0 0 0 0 34466 4446 31383 289087 228816 228816 5888 1 MDQCVTVERELEK Acetyl (Protein N-term) 1677.7702 0.77020634 4446 Q9H871 RMND5A Protein RMD5 homolog A yes yes 1 0 1 By MS/MS By MS/MS 6 4 1 1 1 1 74.732 69.576 2 1.1398E-33 87312 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 172.51 133.72 157420000 0 157420000 0 0 0 0 0 0 0 0 0 0 0 0 0 34467 4446 31383 289088;289089 228817;228818 228817 2 MDQFGNGLEIDQAR Oxidation (M) 1608.7202 0.72021968 5068 Q9UQ84 EXO1 Exonuclease 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 62.221 62.374 2 4.7613E-20 71191 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 140.24 123.67 48747000 0 0 0 2224000 0 2913600 4997800 2693300 2748500 4106800 4763200 11769000 4787500 3453300 4290400 34468 5068 31384 289090;289091;289092;289093;289094;289095;289096;289097;289098;289099;289100 228819;228820;228821;228822;228823;228824;228825;228826;228827;228828;228829 228828 6439 9 MDQFGNGLEIDQAR Unmodified 1592.7253 0.72530506 5068 Q9UQ84 EXO1 Exonuclease 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 67.98 68.139 2 0.00031931 77494 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.403 62.731 24326000 0 0 0 0 0 5484400 1905300 4689800 0 3326300 0 4802800 4117800 0 0 34469 5068 31384 289101;289102;289103;289104;289105;289106;289107;289108;289109 228830;228831;228832;228833;228834;228835;228836;228837 228832 8 MDQIIEGNMK Oxidation (M) 1193.542 0.54204431 477 O75312 ZPR1 Zinc finger protein ZPR1 yes yes 0 1 0 By MS/MS 2 0 2 2 37.888 32.983 2 0.0023527 46024 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.65 74.343 50563000 0 50563000 0 0 0 0 0 0 0 0 0 0 0 0 0 34470 477 31385 289110;289111 228838;228839 228839 601;602 2 MDQIIEGNMK 2 Oxidation (M) 1209.537 0.53695893 477 O75312 ZPR1 Zinc finger protein ZPR1 yes yes 0 2 0 By MS/MS 2 0 1 1 24.536 20.407 2 0.036765 26907 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 55.064 9.6958 7390900 0 7390900 0 0 0 0 0 0 0 0 0 0 0 0 0 34471 477 31385 289112 228840 228840 601;602 0 MDQLLLEK Unmodified 988.52632 0.52631789 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 0 By MS/MS 2 0 1 1 62.203 56.31 2 0.046322 72250 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.016 26.587 20128000 0 20128000 0 0 0 0 0 0 0 0 0 0 0 0 0 34472 2446 31386 289113 228841 228841 1 MDQPPQAK Oxidation (M) 929.42767 0.42766648 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 1 0 By MS/MS By MS/MS 1.67 0.471 1 2 2 1 40.529 40.031 2 0.01055 92765 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 102.77 71.484 112040000 83903000 28132000 0 0 0 0 0 0 0 0 0 0 0 0 0 34473 1337 31387 289114;289115;289116 228842;228843;228844 228843 2016 3 MDQPPQAK Unmodified 913.43275 0.43275186 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 5 3.87 5 3 2 1 2 1 1 1 12.207 10.328 2 0.01206 13359 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.32 56.351 147870000 45928000 59203000 11692000 0 0 0 0 0 0 0 0 0 2090500 9553900 19399000 34474 1337 31387 289117;289118;289119;289120;289121;289122;289123;289124 228845;228846;228847;228848 228845 3 MDQTSSEIVR Unmodified 1164.5445 0.54448715 4161 Q9BUI4 POLR3C DNA-directed RNA polymerase III subunit RPC3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 27.761 28.083 2 0.008359 29351 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.906 76.748 4093400 0 0 0 0 0 0 0 0 0 0 0 0 0 4093400 0 34475 4161 31388 289125;289126;289127;289128;289129 228849;228850;228851;228852;228853 228851 5 MDQTSSEIVR Oxidation (M) 1180.5394 0.53940177 4161 Q9BUI4 POLR3C DNA-directed RNA polymerase III subunit RPC3 yes yes 0 1 0 By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 21.133 21.349 2 0.0045331 22304 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 63.816 47.613 22490000 0 0 0 1968200 0 2394000 2488200 1998400 0 3184900 3156500 0 2131900 2649500 2518900 34476 4161 31388 289130;289131;289132;289133;289134;289135;289136;289137;289138 228854;228855;228856 228854 5646 3 MDQVNWQQER Unmodified 1332.5881 0.5880833 5184 Q9Y450 HBS1L HBS1-like protein yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 42.019 42.424 2 0.0082907 46406 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.398 39.026 21224000 0 0 0 0 0 3456200 0 0 2380300 0 0 3176700 3548100 0 8662900 34477 5184 31389 289139;289140;289141;289142;289143 228857 228857 1 MDQYFNQMEK 2 Oxidation (M) 1364.5377 0.53768721 2102;329 Q04637;O43432 EIF4G1;EIF4G3 Eukaryotic translation initiation factor 4 gamma 1;Eukaryotic translation initiation factor 4 gamma 3 no no 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.09 28.287 2 0.00019285 30326 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 131.5 126.3 570450000 0 0 0 24715000 42200000 34200000 44452000 35643000 39651000 52307000 79467000 73117000 70470000 33399000 40827000 34478 2102;329 31390 289144;289145;289146;289147;289148;289149;289150;289151;289152;289153;289154;289155 228858;228859;228860;228861;228862;228863;228864;228865;228866;228867;228868;228869 228858 418;419 12 MDQYFNQMEK Oxidation (M) 1348.5428 0.54277259 2102;329 Q04637;O43432 EIF4G1;EIF4G3 Eukaryotic translation initiation factor 4 gamma 1;Eukaryotic translation initiation factor 4 gamma 3 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 39.627 39.805 2 4.7975E-08 48066 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 152.28 142.69 925900000 0 0 0 56989000 49388000 63034000 56423000 60663000 54103000 92312000 86837000 155350000 88511000 80829000 81455000 34479 2102;329 31390 289156;289157;289158;289159;289160;289161;289162;289163;289164;289165;289166;289167;289168;289169;289170;289171;289172;289173;289174;289175;289176;289177;289178;289179 228870;228871;228872;228873;228874;228875;228876;228877;228878;228879;228880;228881;228882;228883;228884;228885;228886;228887;228888;228889;228890 228886 418;419 21 MDQYFNQMEK Unmodified 1332.5479 0.54785797 2102;329 Q04637;O43432 EIF4G1;EIF4G3 Eukaryotic translation initiation factor 4 gamma 1;Eukaryotic translation initiation factor 4 gamma 3 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.024 51.175 2 0.00029246 58798 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 157.96 153.34 1091400000 0 0 0 42035000 63507000 60874000 52945000 78683000 46485000 100780000 97951000 175180000 75718000 101050000 196210000 34480 2102;329 31390 289180;289181;289182;289183;289184;289185;289186;289187;289188;289189;289190;289191 228891;228892;228893;228894;228895;228896;228897;228898;228899;228900;228901;228902;228903;228904;228905;228906;228907;228908;228909;228910 228908 20 MDRAPTEQNVK Acetyl (Protein N-term) 1329.6347 0.63469914 3708 Q93073 SECISBP2L Selenocysteine insertion sequence-binding protein 2-like yes yes 1 0 1 By MS/MS 2 0 1 1 35.334 30.578 2 0.027455 40025 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.067 41.132 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34481 3708 31391 289192 228911 228911 1 MDSAGQDINLNSPNK Acetyl (Protein N-term);Oxidation (M) 1660.7363 0.73626368 325 O43399 TPD52L2 Tumor protein D54 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.81 3.8 3 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 55.706 55.713 2;3 1.189E-167 79406 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 245.69 191.27 759060000 70742000 2780500 0 41475000 44337000 44278000 51118000 50844000 45230000 61896000 76499000 91924000 64132000 58532000 55275000 34482 325 31392 289193;289194;289195;289196;289197;289198;289199;289200;289201;289202;289203;289204;289205;289206;289207;289208 228912;228913;228914;228915;228916;228917;228918;228919;228920;228921;228922;228923;228924;228925;228926;228927;228928;228929;228930;228931;228932 228919 417 21 MDSAGQDINLNSPNK Acetyl (Protein N-term) 1644.7413 0.74134906 325 O43399 TPD52L2 Tumor protein D54 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.79 2.98 1 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66.553 66.103 2;3 3.2197E-130 72848 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 208.74 204.44 677020000 5718200 2801600 0 28958000 37329000 36096000 33099000 58056000 34316000 76167000 78334000 78062000 53361000 51861000 102860000 34483 325 31392 289209;289210;289211;289212;289213;289214;289215;289216;289217;289218;289219;289220;289221;289222 228933;228934;228935;228936;228937;228938;228939;228940;228941;228942;228943;228944;228945;228946;228947;228948 228934 16 MDSCIEAFGTTK Unmodified 1358.5846 0.58463741 4303 Q9GZS1 POLR1E DNA-directed RNA polymerase I subunit RPA49 yes yes 0 0 0 By MS/MS 2 0 1 1 61.316 55.441 2 0.0075671 71180 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.548 49.728 44005000 0 44005000 0 0 0 0 0 0 0 0 0 0 0 0 0 34484 4303 31393 289223 228949 228949 1 MDSEAFQSAR Acetyl (Protein N-term);Oxidation (M) 1198.4925 0.49245158 3542 Q8WUF5 PPP1R13L RelA-associated inhibitor yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.326 37.506 2 0.0003499 41112 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 81.338 75.033 117550000 0 0 0 7190000 6969100 12448000 9824100 7553300 9652000 11370000 12461000 7812500 11666000 7276700 13331000 34485 3542 31394 289224;289225;289226;289227;289228;289229;289230;289231;289232;289233;289234;289235 228950;228951;228952;228953;228954;228955;228956;228957;228958;228959;228960;228961;228962 228960 5035 13 MDSEAFQSAR Acetyl (Protein N-term) 1182.4975 0.49753696 3542 Q8WUF5 PPP1R13L RelA-associated inhibitor yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 57.159 57.351 2 0.00054751 65011 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 122.33 117.97 116100000 0 0 0 0 7109300 10468000 7807200 6875700 5670500 10945000 11731000 15362000 10652000 10422000 19054000 34486 3542 31394 289236;289237;289238;289239;289240;289241;289242;289243;289244;289245;289246 228963;228964;228965;228966;228967;228968;228969;228970;228971;228972;228973;228974 228968 12 MDSFDEDLARPSGLLAQER Oxidation (M) 2165.0059 0.005896599 5122 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 76.54 76.66 3 0.00010132 88488 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 52.612 44.222 44530000 0 0 0 0 0 8720500 0 0 6449700 10717000 8488600 0 0 10154000 0 34487 5122 31395 289247;289248;289249;289250;289251 228975;228976;228977;228978;228979 228976 6509 5 MDSLVTANTK Acetyl (Protein N-term) 1120.5434 0.54342452 3945 Q96P63 SERPINB12 Serpin B12 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 67.62 67.635 2 3.1971E-17 77689 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 169.44 134.61 259110000 0 0 0 81622000 16813000 15471000 11308000 44081000 8081600 26623000 27005000 28101000 0 0 0 34488 3945 31396 289252;289253;289254;289255;289256;289257;289258;289259;289260 228980;228981;228982;228983;228984;228985;228986 228982 7 MDSLVTANTK Acetyl (Protein N-term);Oxidation (M) 1136.5383 0.53833914 3945 Q96P63 SERPINB12 Serpin B12 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 2 1 1 1 1 1 1 1 1 2 1 42.413 42.545 2 4.4991E-05 47132 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 138.98 110.8 139600000 0 0 0 28125000 14610000 0 6672200 22452000 5438500 12441000 7738200 15681000 15026000 6215600 5200300 34489 3945 31396 289261;289262;289263;289264;289265;289266;289267;289268;289269;289270;289271;289272;289273;289274 228987;228988;228989;228990;228991;228992;228993;228994;228995;228996;228997;228998;228999;229000;229001;229002;229003 228988 5426 15 MDSQGRK Acetyl (Protein N-term);Oxidation (M) 878.39162 0.39161532 1836 P61160 ACTR2 Actin-related protein 2 yes yes 1 1 1 By MS/MS By MS/MS 1.5 0.5 1 1 1 1 56.185 57.197 2 0.0073381 92896 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 75.269 52.646 46385000 30829000 15556000 0 0 0 0 0 0 0 0 0 0 0 0 0 34490 1836 31397 289275;289276 229004;229005 229005 2978 1 MDSQGRK Acetyl (Protein N-term) 862.3967 0.3967007 1836 P61160 ACTR2 Actin-related protein 2 yes yes 1 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 7.3959 4.0237 2 0.014878 6086 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.673 60.335 873970000 35361000 838610000 0 0 0 0 0 0 0 0 0 0 0 0 0 34491 1836 31397 289277;289278;289279 229006;229007;229008 229006 2 MDSSIHLSSLISR Acetyl (Protein N-term);Oxidation (M) 1502.7399 0.73989249 4448 Q9H8E8 CSRP2BP Cysteine-rich protein 2-binding protein yes yes 1 1 0 By MS/MS By MS/MS 10 0 2 1 1 78.683 78.585 2 0.00012606 90856 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 67.385 57.153 8424400 0 0 0 0 3347400 0 0 0 0 5077000 0 0 0 0 0 34492 4448 31398 289280;289281 229009;229010 229010 5889 1 MDSSSSSSAAGLGAVDPQLQHFIEVETQK Acetyl (Protein N-term) 3060.4346 0.43460894 383 O60220 TIMM8A Mitochondrial import inner membrane translocase subunit Tim8 A yes yes 1 0 0 By MS/MS 2 0 1 1 97.602 92.829 3 6.1471E-08 114825 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 48.18 45.183 48833000 0 48833000 0 0 0 0 0 0 0 0 0 0 0 0 0 34493 383 31399 289282 229011;229012 229011 2 MDSTANEVEAVK Oxidation (M) 1308.5867 0.5867459 838 P07237 P4HB Protein disulfide-isomerase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.81 4.13 3 3 10 2 3 1 1 1 1 1 1 1 1 1 1 1 43.085 42.782 2 1.7876E-18 99912 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 158.94 111.95 815180000 299470000 304550000 4503700 22085000 18083000 13465000 1626800 13482000 10905000 16602000 53943000 41058000 15414000 0 0 34494 838 31400 289283;289284;289285;289286;289287;289288;289289;289290;289291;289292;289293;289294;289295;289296;289297;289298 229013;229014;229015;229016;229017;229018;229019;229020;229021;229022;229023;229024;229025;229026;229027;229028 229022 1027 12 MDSTANEVEAVK Unmodified 1292.5918 0.59183127 838 P07237 P4HB Protein disulfide-isomerase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.72 1 3 1 11 1 3 1 1 1 1 1 1 1 1 1 1 1 1 39.209 38.189 2 1.6016E-17 36338 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 146.11 124.64 1224900000 89319000 361490000 2558000 30276000 31421000 18955000 0 36980000 13749000 34578000 178840000 102060000 32980000 68863000 222880000 34495 838 31400 289299;289300;289301;289302;289303;289304;289305;289306;289307;289308;289309;289310;289311;289312;289313;289314 229029;229030;229031;229032;229033;229034;229035;229036;229037;229038;229039;229040;229041;229042;229043;229044;229045 229041 9 MDSTEPPYSQK Oxidation (M) 1297.5496 0.54963211 1960 P68104;Q5VTE0 EEF1A1;EEF1A1P5 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3 yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.24 3.93 3 3 1 14 2 4 1 1 1 1 1 1 1 1 1 1 2 3 34.267 34.168 2 1.4472E-28 101985 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 197.27 173.95 2300400000 307890000 303280000 0 114730000 119000000 178580000 0 146890000 116750000 201240000 169520000 169290000 161220000 135930000 176120000 34496 1960 31401 289315;289316;289317;289318;289319;289320;289321;289322;289323;289324;289325;289326;289327;289328;289329;289330;289331;289332;289333;289334;289335 229046;229047;229048;229049;229050;229051;229052;229053;229054;229055;229056;229057;229058;229059;229060;229061;229062;229063;229064;229065;229066 229060 3147 20 MDSTEPPYSQK Unmodified 1281.5547 0.55471749 1960 P68104;Q5VTE0 EEF1A1;EEF1A1P5 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.64 3 1 14 1 3 1 1 1 2 1 1 1 1 1 1 2 1 40.092 40.671 2 7.4195E-28 27164 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 174.02 167.29 4086400000 114130000 106260000 0 243370000 193260000 329400000 294410000 269440000 238820000 334060000 333140000 444810000 253700000 267480000 664090000 34497 1960 31401 289336;289337;289338;289339;289340;289341;289342;289343;289344;289345;289346;289347;289348;289349;289350;289351;289352;289353 229067;229068;229069;229070;229071;229072;229073;229074;229075;229076;229077;229078;229079;229080;229081;229082;229083;229084;229085;229086;229087;229088;229089;229090;229091;229092;229093 229079 27 MDSTLTASEIR Acetyl (Protein N-term);Oxidation (M) 1280.5918 0.59183127 1578 P49588 AARS Alanine--tRNA ligase, cytoplasmic yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 55.525 55.286 2 0.00053813 63486 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 62.303 49.714 25501000 0 0 0 5395400 5389600 8657400 0 6058700 0 0 0 0 0 0 0 34498 1578 31402 289354;289355;289356;289357 229094;229095;229096;229097 229096 2534 4 MDSTLTASEIR Acetyl (Protein N-term) 1264.5969 0.59691665 1578 P49588 AARS Alanine--tRNA ligase, cytoplasmic yes yes 1 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 72.393 72.713 2 0.00010363 82989 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.523 83.297 128600000 0 0 0 0 0 0 0 0 0 0 32625000 21905000 0 0 74070000 34499 1578 31402 289358;289359;289360 229098;229099;229100 229098 3 MDSTNADALYVR Oxidation (M) 1370.6136 0.61362935 4035 Q99615 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 43.679 43.873 2 1.5138E-05 48715 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 102.52 50.269 109820000 0 0 0 0 8020300 14038000 16841000 0 0 0 22181000 28874000 19864000 0 0 34500 4035 31403 289361;289362;289363;289364;289365;289366;289367;289368;289369;289370 229101;229102;229103;229104;229105;229106;229107;229108;229109;229110;229111 229106 5541 11 MDSTNADALYVR Unmodified 1354.6187 0.61871473 4035 Q99615 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 0 0 0 By MS/MS 10 0 1 1 49.806 50.517 2 0.048546 56096 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.999 14.774 47411000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47411000 34501 4035 31403 289371 229112 229112 1 MDTDLETMDLDQGGEALAPR 2 Oxidation (M) 2208.9515 0.95147777 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 2 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 1 2 2 1 2 2 2 1 2 2 1 68.317 68.418 2;3 4.2644E-79 78740 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 162.93 150.57 130800000 0 0 0 4834400 5485400 15414000 14271000 4161600 11876000 12324000 16426000 9062000 16962000 13486000 6500600 34502 528 31404 289372;289373;289374;289375;289376;289377;289378;289379;289380;289381;289382;289383;289384;289385;289386;289387;289388;289389;289390 229113;229114;229115;229116;229117;229118;229119;229120;229121;229122;229123;229124;229125;229126 229126 686;687 14 MDTDLETMDLDQGGEALAPR Unmodified 2176.9616 0.96164852 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 80.486 80.628 2 4.1594E-123 92935 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 187.97 173.09 23747000 0 0 0 0 0 3903200 0 4121500 0 0 0 0 0 0 15722000 34503 528 31404 289391;289392;289393 229127;229128;229129 229128 2 MDTDLETMDLDQGGEALAPR Oxidation (M) 2192.9566 0.95656314 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 1 0 By matching By matching By matching By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 77.492 77.561 2 2.515E-53 89725 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 121.76 111.15 20143000 0 0 0 0 2325700 3896400 1970400 3139200 2943800 0 5867300 0 0 0 0 34504 528 31404 289394;289395;289396;289397;289398;289399 229130 229130 686;687 1 MDTIDQDDELIR Oxidation (M) 1478.6559 0.65588809 3701 Q93008 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 55.206 55.341 2 8.3856E-11 61953 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 145.89 118.79 61995000 0 0 0 4308400 3625600 7754900 0 3061500 2628100 8208400 6915900 6887800 4534700 5011000 9058700 34505 3701 31405 289400;289401;289402;289403;289404;289405;289406;289407;289408;289409;289410 229131;229132;229133;229134;229135;229136;229137;229138 229133 5269 7 MDTSRVQPIK Acetyl (Protein N-term);Oxidation (M) 1231.6231 0.62307182 1919 P62857 RPS28 40S ribosomal protein S28 yes yes 1 1 1 By MS/MS By MS/MS By MS/MS 2 0.577 1 4 1 2 3 1 46.138 43.112 2 0.00051436 40278 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 99.257 61.708 2070800000 88004000 1973400000 9376400 0 0 0 0 0 0 0 0 0 0 0 0 34506 1919 31406 289411;289412;289413;289414;289415;289416 229139;229140;229141;229142;229143 229143 3099 4 MDTSRVQPIK Acetyl (Protein N-term) 1215.6282 0.6281572 1919 P62857 RPS28 40S ribosomal protein S28 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 50.82 45.968 2 0.00046853 60024 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.5 81.656 1905000000 0 1895500000 9543100 0 0 0 0 0 0 0 0 0 0 0 0 34507 1919 31406 289417;289418;289419;289420 229144;229145;229146 229144 3 MDTTTPLK Oxidation (M) 921.44773 0.44773322 4381 Q9H3P2 NELFA Negative elongation factor A yes yes 0 1 0 By MS/MS By matching By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 17.471 17.532 2 0.029898 16952 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 48.561 27.015 11273000 0 0 0 3074200 318320 2720500 0 2273000 0 0 2887300 0 0 0 0 34508 4381 31407 289421;289422;289423;289424;289425 229147 229147 1 MDTTTPLK Unmodified 905.45282 0.4528186 4381 Q9H3P2 NELFA Negative elongation factor A yes yes 0 0 0 By MS/MS 10 0 1 1 27.9 28.241 2 0.01524 30417 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 69.198 29.535 10083000 0 0 0 0 0 0 0 0 0 0 0 0 10083000 0 0 34509 4381 31407 289426 229148 229148 1 MDVANLAK Unmodified 860.44259 0.44258826 4329 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 44.381 43.377 2 0.015549 47450 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.7 5.9853 235280000 0 80967000 0 14920000 0 22127000 17761000 0 0 18468000 0 32081000 0 16496000 32460000 34510 4329 31408 289427;289428;289429;289430;289431;289432;289433;289434;289435 229149;229150;229151;229152 229151 4 MDVANLAK Oxidation (M) 876.4375 0.43750288 4329 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 yes yes 0 1 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 24.874 25.211 2 0.02948 25761 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.787 15.429 19277000 0 0 0 0 0 4885100 0 0 0 0 0 8716100 0 5676000 0 34511 4329 31408 289436;289437;289438 229153 229153 1 MDVDAEREK Acetyl (Protein N-term) 1133.5023 0.50228799 2763 Q5SXM2 SNAPC4 snRNA-activating protein complex subunit 4 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 30.692 30.399 2 0.0072696 33271 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 73.665 55.44 46085000 0 9878900 0 2670500 3135900 2534300 3358600 2521700 0 4113600 5419000 0 3834300 3651600 4967100 34512 2763 31409 289439;289440;289441;289442;289443;289444;289445;289446;289447;289448;289449 229154;229155;229156;229157;229158;229159;229160;229161 229156 7 MDVDAEREK Acetyl (Protein N-term);Oxidation (M) 1149.4972 0.49720261 2763 Q5SXM2 SNAPC4 snRNA-activating protein complex subunit 4 yes yes 1 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 14.412 14.558 2 0.002755 14025 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 79.906 54.984 29154000 0 0 0 3558400 2214500 0 2522200 0 3199500 3793100 0 4697900 3681400 2096100 3391100 34513 2763 31409 289450;289451;289452;289453;289454;289455;289456;289457;289458;289459;289460 229162;229163;229164;229165;229166;229167;229168;229169;229170;229171 229164 4389 9 MDVERLQEALK Acetyl (Protein N-term);Oxidation (M) 1388.697 0.69696505 4736 Q9NY27 PPP4R2 Serine/threonine-protein phosphatase 4 regulatory subunit 2 yes yes 1 1 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 77.605 72.819 2 0.00014632 88139 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 94.616 51.334 302570000 11260000 284040000 7269700 0 0 0 0 0 0 0 0 0 0 0 0 34514 4736 31410 289461;289462;289463;289464 229172;229173;229174;229175 229173 6113 4 MDVERLQEALK Acetyl (Protein N-term) 1372.7021 0.70205043 4736 Q9NY27 PPP4R2 Serine/threonine-protein phosphatase 4 regulatory subunit 2 yes yes 1 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 86.645 83.146 2 1.1515E-06 103223 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.29 85.746 416400000 0 413990000 2404900 0 0 0 0 0 0 0 0 0 0 0 0 34515 4736 31410 289465;289466;289467 229176;229177;229178 229176 3 MDVFLMIR Acetyl (Protein N-term);Oxidation (M) 1081.53 0.53002306 2523 Q15370 TCEB2 Transcription elongation factor B polypeptide 2 yes yes 1 1 0 By MS/MS By MS/MS 10 0 2 1 1 94.813 94.969 2 0.0048077 110414 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 51.787 48.395 2470100 0 0 0 0 0 0 0 0 0 1355200 1115000 0 0 0 0 34516 2523 31411 289468;289469 229179;229180 229179 4158 2 MDVGELLSYQPNR Acetyl (Protein N-term);Oxidation (M) 1578.7348 0.73480712 3600 Q8WYA6 CTNNBL1 Beta-catenin-like protein 1 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 84.279 84.401 2 0.0004564 96969 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 53.567 45.054 8310800 0 0 0 0 0 0 0 0 0 0 0 4166700 0 4144200 0 34517 3600 31412 289470;289471;289472;289473;289474 229181;229182;229183;229184;229185 229183 5096 4 MDVGELLSYQPNRGTK Acetyl (Protein N-term);Oxidation (M) 1864.8989 0.89891233 3600 Q8WYA6 CTNNBL1 Beta-catenin-like protein 1 yes yes 1 1 1 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.12 2.32 1 7 1 1 1 2 1 1 1 78.902 78.493 2 6.3386E-07 90716 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 87.001 78.488 26814000 0 3492300 0 0 1732600 2899000 4217600 2611000 0 0 6242600 5619100 0 0 0 34518 3600 31413 289475;289476;289477;289478;289479;289480;289481;289482 229186;229187;229188;229189;229190 229187 5096 4 MDVGELLSYQPNRGTK Acetyl (Protein N-term) 1848.904 0.90399771 3600 Q8WYA6 CTNNBL1 Beta-catenin-like protein 1 yes yes 1 0 1 By MS/MS By MS/MS 6 4 1 1 1 1 89.711 87.335 2 2.2664E-38 108324 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 156.8 112.43 39660000 0 35837000 0 0 0 0 0 0 0 0 0 0 0 0 3823300 34519 3600 31413 289483;289484 229191;229192 229191 2 MDVHITPGTHASEHAVNK Unmodified 1942.9319 0.93194379 5160 Q9Y3D0 FAM96B Mitotic spindle-associated MMXD complex subunit MIP18 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 2 1 1 1 1 1 2 34.198 33.426 3;4 0.0023293 34862 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.872 28.922 150650000 42483000 16935000 0 0 0 13419000 0 6453400 0 7501700 8921400 14821000 0 7607700 32504000 34520 5160 31414 289485;289486;289487;289488;289489;289490;289491;289492;289493;289494;289495 229193;229194;229195 229194 2 MDVHITPGTHASEHAVNK Oxidation (M) 1958.9269 0.92685842 5160 Q9Y3D0 FAM96B Mitotic spindle-associated MMXD complex subunit MIP18 yes yes 0 1 0 By MS/MS 2 0 1 1 30.406 24.687 3 0.00042111 34579 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.407 49.349 20623000 20623000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34521 5160 31414 289496 229196 229196 6535 0 MDVLAEANGTFALNLLK Acetyl (Protein N-term);Oxidation (M) 1876.9604 0.96044996 1344 P35237 SERPINB6 Serpin B6 yes yes 1 1 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 100.08 94.619 2 2.1828E-95 118508 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 202.44 176.74 183900000 36601000 147300000 0 0 0 0 0 0 0 0 0 0 0 0 0 34522 1344 31415 289497;289498;289499 229197;229198 229197 2041 2 MDVLAEANGTFALNLLK Acetyl (Protein N-term) 1860.9655 0.96553533 1344 P35237 SERPINB6 Serpin B6 yes yes 1 0 0 By MS/MS 2.33 0.471 2 1 3 104.03 99.665 2 1.4013E-117 121902 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 264.84 245.71 123680000 0 123680000 0 0 0 0 0 0 0 0 0 0 0 0 0 34523 1344 31415 289500;289501;289502 229199;229200;229201;229202 229200 4 MDVLAEEFGNLTPEQLAAPIPTVEEK Acetyl (Protein N-term) 2882.4259 0.42594173 4689 Q9NW08 POLR3B DNA-directed RNA polymerase III subunit RPC2 yes yes 1 0 0 By MS/MS 2 0 1 1 102.38 97.668 3 1.5076E-12 120649 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.805 71.156 127110000 0 127110000 0 0 0 0 0 0 0 0 0 0 0 0 0 34524 4689 31416 289503 229203;229204 229204 2 MDVLVSECSAR Acetyl (Protein N-term);Oxidation (M) 1323.5799 0.57988638 1733 P54136 RARS Arginine--tRNA ligase, cytoplasmic yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.2 3.6 1 4 1 1 1 1 1 73.102 73.484 2 0.00084499 66340 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 56.563 49.972 10966000 0 2646500 0 0 0 4530200 0 0 0 0 0 0 3789700 0 0 34525 1733 31417 289504;289505;289506;289507;289508 229205;229206;229207;229208;229209 229205 2814 5 MDVLVSECSAR Acetyl (Protein N-term) 1307.585 0.58497176 1733 P54136 RARS Arginine--tRNA ligase, cytoplasmic yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.18 2.59 1 10 1 1 1 1 1 1 1 1 1 1 1 82.823 82.994 2 5.3636E-05 97913 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 110.53 93.508 104070000 0 15203000 0 0 5102000 7352500 6575200 5214000 0 11349000 14067000 10618000 3797700 7891900 16896000 34526 1733 31417 289509;289510;289511;289512;289513;289514;289515;289516;289517;289518;289519 229210;229211;229212;229213;229214;229215;229216;229217;229218;229219;229220 229216 11 MDVLVSECSARLLQQEEEIK Acetyl (Protein N-term) 2418.1771 0.17706103 1733 P54136 RARS Arginine--tRNA ligase, cytoplasmic yes yes 1 0 1 By MS/MS By MS/MS 2.33 0.471 4 2 1 5 97.946 92.806 2;3 0 115574 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 271.19 234.04 271560000 30355000 241200000 0 0 0 0 0 0 0 0 0 0 0 0 0 34527 1733 31418 289520;289521;289522;289523;289524;289525 229221;229222;229223;229224;229225;229226 229222 6 MDVLVSECSARLLQQEEEIK Acetyl (Protein N-term);Oxidation (M) 2434.172 0.17197565 1733 P54136 RARS Arginine--tRNA ligase, cytoplasmic yes yes 1 1 1 By MS/MS 3 0 1 1 89.099 85.888 3 6.5237E-05 103072 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 50.883 43.851 30147000 0 30147000 0 0 0 0 0 0 0 0 0 0 0 0 0 34528 1733 31418 289526 229227 229227 2814 1 MDVNIAPLR Acetyl (Protein N-term) 1069.559 0.559015 557 O75915 ARL6IP5 PRA1 family protein 3 yes yes 1 0 0 By MS/MS 10 0 1 1 84.153 84.26 2 0.0091021 96788 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 49.097 36.1 2706400 0 0 0 0 0 0 0 0 0 0 0 0 0 2706400 0 34529 557 31419 289527 229228 229228 1 MDVNIAPLR Acetyl (Protein N-term);Oxidation (M) 1085.5539 0.55392962 557 O75915 ARL6IP5 PRA1 family protein 3 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 71.497 71.446 2 0.0015731 82260 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 61.999 44.614 49262000 0 0 0 6866000 6211200 0 0 9623800 5931700 0 10643000 0 9987200 0 0 34530 557 31419 289528;289529;289530;289531;289532;289533 229229;229230 229229 722 2 MDVNVGDIDIEGPEGK Oxidation (M) 1702.772 0.77198048 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.68 1.57 1 24 1 2 2 2 2 2 2 2 2 2 2 2 2 72.062 71.93 2 1.3993E-27 82118 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 130.1 98.502 184820000 0 23397000 0 7978000 10465000 10521000 11638000 14967000 12503000 12920000 12092000 22054000 16163000 13269000 16853000 34531 2172 31420 289534;289535;289536;289537;289538;289539;289540;289541;289542;289543;289544;289545;289546;289547;289548;289549;289550;289551;289552;289553;289554;289555;289556;289557;289558 229231;229232;229233;229234;229235;229236;229237;229238;229239;229240;229241;229242;229243;229244;229245 229236 3529 14 MDVNVGDIDIEGPEGK Unmodified 1686.7771 0.77706586 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.64 2.9 1 1 9 1 1 1 1 1 1 1 1 1 1 1 79.152 78.199 2 5.275E-15 90637 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 126.83 115.1 127380000 18595000 2798600 0 0 7595700 0 0 10106000 8186800 15040000 11267000 15135000 10605000 10099000 17953000 34532 2172 31420 289559;289560;289561;289562;289563;289564;289565;289566;289567;289568;289569 229246;229247;229248;229249;229250;229251;229252;229253;229254;229255;229256;229257;229258 229247 13 MDVQLTK Unmodified 833.43169 0.43168922 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.272 35.454 2 0.023967 39043 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 83.753 40.686 151870000 0 0 0 6955500 10639000 11406000 11917000 12127000 6832000 17266000 15284000 18178000 13663000 11950000 15650000 34533 3023 31421 289570;289571;289572;289573;289574;289575;289576;289577;289578;289579;289580;289581 229259;229260;229261;229262;229263 229263 5 MDVRDQVAIHEAMEQQTISITK Unmodified 2542.252 0.2519573 2415 Q14566 MCM6 DNA replication licensing factor MCM6 yes yes 0 0 1 By MS/MS 2 0 1 1 81.045 72.915 4 0.0015786 95653 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.593 41.881 18634000 18634000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34534 2415 31422 289582 229264 229264 1 MDVTSQAR Acetyl (Protein N-term);Oxidation (M) 964.42839 0.42839476 4018 Q99527 GPER1 G-protein coupled estrogen receptor 1 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 22.352 22.447 2 0.0048077 23676 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.787 29.165 24111000 0 0 0 0 3506000 4609300 4228100 0 0 5658000 0 0 0 0 6110100 34535 4018 31423 289583;289584;289585;289586;289587 229265;229266;229267 229265 5519 3 MDVTSQAR Acetyl (Protein N-term) 948.43348 0.43348014 4018 Q99527 GPER1 G-protein coupled estrogen receptor 1 yes yes 1 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 41.774 41.884 2 0.0095728 45462 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 56.011 33.88 40136000 0 0 0 0 3397300 0 4433700 11682000 4075200 5784400 7181800 0 0 3582000 0 34536 4018 31423 289588;289589;289590;289591;289592;289593;289594 229268;229269 229269 2 MDVTSSSGGGGDPR Acetyl (Protein N-term);Oxidation (M) 1379.5623 0.56232206 3269 Q8IY22 CMIP C-Maf-inducing protein yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 21.058 21.306 2 0.00015564 22093 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 60.434 58.035 14661000 0 0 0 0 0 0 5077500 0 0 2441800 3531300 0 3610600 0 0 34537 3269 31424 289595;289596;289597;289598 229270;229271;229272;229273 229273 4879 4 MDVTSSSGGGGDPR Acetyl (Protein N-term) 1363.5674 0.56740744 3269 Q8IY22 CMIP C-Maf-inducing protein yes yes 1 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 38.801 38.532 2 0.00012834 42853 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 72.006 41.436 7262300 0 0 0 3068300 1592100 0 0 0 0 2601900 0 0 0 0 0 34538 3269 31424 289599;289600;289601;289602 229274;229275;229276 229274 3 MDVVGTGQCHNIPCEEGDK Oxidation (M) 2160.8874 0.88743772 2627 Q16666 IFI16 Gamma-interferon-inducible protein 16 yes yes 0 1 0 By MS/MS 2 0 1 1 41.72 36.624 3 0.00071885 47543 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 45.844 37.244 13909000 0 13909000 0 0 0 0 0 0 0 0 0 0 0 0 0 34539 2627 31425 289603 229277 229277 4281 1 MDVVGTGQCHNIPCEEGDK Unmodified 2144.8925 0.8925231 2627 Q16666 IFI16 Gamma-interferon-inducible protein 16 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 50.311 44.99 3 0.00061717 58588 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 36.481 27.689 45781000 0 45781000 0 0 0 0 0 0 0 0 0 0 0 0 0 34540 2627 31425 289604;289605 229278;229279;229280;229281;229282 229280 5 MDYEDDRLR Oxidation (M) 1227.519 0.51900068 1473 P43243 MATR3 Matrin-3 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 22.976 23.224 3 0.0067974 23656 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 53.683 47.023 85510000 0 0 0 0 6404600 10318000 8446800 5851700 6007800 0 6607800 11469000 14224000 8233100 7947100 34541 1473 31426 289606;289607;289608;289609;289610;289611;289612;289613;289614;289615 229283;229284 229284 2312 2 MDYEDDRLR Unmodified 1211.5241 0.52408606 1473 P43243 MATR3 Matrin-3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.861 32.048 3 0.023972 33928 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.056 62.49 375320000 0 0 0 20014000 18795000 37135000 22735000 21880000 18012000 31409000 35859000 48222000 45636000 27028000 48595000 34542 1473 31426 289616;289617;289618;289619;289620;289621;289622;289623;289624;289625;289626;289627 229285 229285 0 MDYEDDRLRDGER Unmodified 1668.7162 0.71619694 1473 P43243 MATR3 Matrin-3 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.73 29.921 4 0.003981 31841 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 41.644 40.393 224860000 0 0 0 12279000 8983900 15988000 9014200 17113000 14269000 12897000 12336000 27555000 28617000 20312000 45490000 34543 1473 31427 289628;289629;289630;289631;289632;289633;289634;289635;289636;289637;289638;289639 229286;229287 229287 2 MEAAAEPGNLAGVR Acetyl (Protein N-term);Oxidation (M) 1442.6824 0.68237762 5255 Q9Y5Y2 NUBP2 Cytosolic Fe-S cluster assembly factor NUBP2 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 59.32 59.584 2 5.9035E-07 67809 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 90.685 80.162 166280000 0 0 0 0 0 15502000 23269000 18386000 8763300 0 18826000 18390000 18836000 16905000 27397000 34544 5255 31428 289640;289641;289642;289643;289644;289645;289646;289647;289648 229288;229289;229290;229291;229292;229293;229294;229295;229296 229296 6655 9 MEAAAEPGNLAGVR Acetyl (Protein N-term) 1426.6875 0.68746299 5255 Q9Y5Y2 NUBP2 Cytosolic Fe-S cluster assembly factor NUBP2 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.157 74.218 2 3.0927E-08 85525 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 119.53 106.95 222750000 0 0 0 8250900 13052000 17188000 13959000 20251000 8621900 26764000 23012000 18452000 14435000 19758000 39003000 34545 5255 31428 289649;289650;289651;289652;289653;289654;289655;289656;289657;289658;289659;289660 229297;229298;229299;229300;229301;229302;229303;229304;229305;229306;229307;229308 229298 12 MEAAETEAEAAALEVLAEVAGILEPVGLQEEAELPAK Acetyl (Protein N-term) 3832.918 0.9179826 629 O95229 ZWINT ZW10 interactor yes yes 1 0 0 By MS/MS By MS/MS 2 0 3 1 2 108.46 102.58 3;4 8.1081E-51 128505 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.803 86.12 21601000 14835000 6765900 0 0 0 0 0 0 0 0 0 0 0 0 0 34546 629 31429 289661;289662;289663 229309;229310;229311 229311 3 MEAAFTK Unmodified 796.37893 0.37892537 2164 Q08AD1 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 28.782 25.055 2 0.042766 32424 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.469 40.25 22996000 0 20700000 2295600 0 0 0 0 0 0 0 0 0 0 0 0 34547 2164 31430 289664;289665 229312;229313 229312 2 MEAAGSPAATETGK Acetyl (Protein N-term) 1361.6133 0.613295 4112 Q9BRP8 WIBG Partner of Y14 and mago yes yes 1 0 0 By MS/MS 1 0 1 1 99.375 104.64 2 0.0029131 83962 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 72.958 62.726 7880200 7880200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34548 4112 31431 289666 229314 229314 0 MEAAHFFEGTEK Acetyl (Protein N-term);Oxidation (M) 1453.6184 0.61838038 1059 P17707 AMD1 S-adenosylmethionine decarboxylase proenzyme;S-adenosylmethionine decarboxylase alpha chain;S-adenosylmethionine decarboxylase beta chain yes yes 1 1 0 By MS/MS 2 0 1 1 72.988 67.443 2 0.0012986 85291 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.014 70.234 20987000 0 20987000 0 0 0 0 0 0 0 0 0 0 0 0 0 34549 1059 31432 289667 229315 229315 1484 1 MEAAHFFEGTEK Acetyl (Protein N-term) 1437.6235 0.62346575 1059 P17707 AMD1 S-adenosylmethionine decarboxylase proenzyme;S-adenosylmethionine decarboxylase alpha chain;S-adenosylmethionine decarboxylase beta chain yes yes 1 0 0 By MS/MS 2 0 1 1 84.003 79.283 2 1.4761E-24 98499 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 199.03 175.89 55640000 0 55640000 0 0 0 0 0 0 0 0 0 0 0 0 0 34550 1059 31432 289668 229316 229316 1 MEAARPPPTAGK Acetyl (Protein N-term) 1266.6391 0.63905624 3534 Q8WU10 PYROXD1 Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 1 yes yes 1 0 1 By MS/MS 2.5 0.5 1 1 2 39.992 35.134 2 1.8151E-14 45643 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.09 103.88 42517000 0 42517000 0 0 0 0 0 0 0 0 0 0 0 0 0 34551 3534 31433 289669;289670 229317 229317 1 MEADASVDMFSK Acetyl (Protein N-term);2 Oxidation (M) 1403.5585 0.55848223 185 O14530 TXNDC9 Thioredoxin domain-containing protein 9 yes yes 1 2 0 By MS/MS 1 0 1 1 100.89 106.16 2 0.00028716 85590 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 82.171 71.94 9871700 9871700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34552 185 31434 289671 229318 229318 255;256 1 MEADASVDMFSK Acetyl (Protein N-term);Oxidation (M) 1387.5636 0.56356761 185 O14530 TXNDC9 Thioredoxin domain-containing protein 9 yes yes 1 1 0 By MS/MS By MS/MS 1 0 2 1 1 103.15 106.23 2 0.0023939 95384 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 69.721 65.269 7458300 3381100 4077200 0 0 0 0 0 0 0 0 0 0 0 0 0 34553 185 31434 289672;289673 229319;229320 229320 255;256 2 MEADASVDMFSK Acetyl (Protein N-term) 1371.5687 0.56865299 185 O14530 TXNDC9 Thioredoxin domain-containing protein 9 yes yes 1 0 0 By MS/MS 1 0 1 1 104.74 105.63 2 0.003554 97357 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 58.829 56.094 8521800 0 8521800 0 0 0 0 0 0 0 0 0 0 0 0 0 34554 185 31434 289674 229321 229321 1 MEADGVEVK Oxidation (M) 992.44846 0.4484615 2236 Q13123 IK Protein Red yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 14 1 2 2 1 1 2 2 1 2 17.526 17.74 2 0.0085076 18370 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 60.59 40.953 40947000 0 0 0 0 1654400 4540100 4723300 0 2288400 3345600 6213100 8934700 3573100 5674000 0 34555 2236 31435 289675;289676;289677;289678;289679;289680;289681;289682;289683;289684;289685;289686;289687;289688 229322;229323;229324;229325;229326;229327;229328 229323 3633 7 MEADGVEVK Unmodified 976.45355 0.45354688 2236 Q13123 IK Protein Red yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 30.355 30.443 2 0.0051666 33098 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 81.548 37.74 99848000 0 0 0 9283500 7937300 13787000 7566400 6471400 6529300 13789000 12035000 0 11811000 10638000 0 34556 2236 31435 289689;289690;289691;289692;289693;289694;289695;289696;289697;289698 229329;229330;229331;229332;229333;229334;229335;229336;229337;229338;229339 229333 11 MEADIITNLR Acetyl (Protein N-term);Oxidation (M) 1232.6071 0.60708741 3806 Q96EA4 SPDL1 Protein Spindly yes yes 1 1 0 By MS/MS By matching By matching By matching By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 79.893 80.053 2 0.0029667 92333 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 46.001 29.462 17658000 0 0 0 0 0 0 2234400 2479700 0 3298600 2183700 2760200 1602800 0 3098300 34557 3806 31436 289699;289700;289701;289702;289703;289704;289705 229340;229341 229340 5333 1 MEADKDDTQQILK Acetyl (Protein N-term);Oxidation (M) 1591.74 0.73995207 2264 Q13287 NMI N-myc-interactor yes yes 1 1 1 By MS/MS 2 0 1 1 45.889 40.49 2 8.2168E-05 52711 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.653 68.908 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34558 2264 31437 289706 229342 229342 3696 1 MEADPDGQQPEK Oxidation (M) 1359.5613 0.56125943 3687 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 1 1 2 9.9276 10.06 2 1.5559E-05 6731 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 91.584 62.497 42423000 0 0 0 2943100 2265800 3710200 3205400 1857400 2320300 3627700 5894600 4801100 3584600 3046800 5165400 34559 3687 31438 289707;289708;289709;289710;289711;289712;289713;289714;289715;289716;289717;289718;289719 229343;229344;229345;229346;229347;229348;229349;229350;229351;229352;229353;229354 229348 5245 12 MEADPDGQQPEK Unmodified 1343.5663 0.5663448 3687 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.841 17.02 2 1.4764E-06 17071 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 115.18 76.883 148820000 0 0 0 7899500 7826400 13045000 9630000 7597800 6681100 12682000 13433000 18875000 14918000 12120000 24108000 34560 3687 31438 289720;289721;289722;289723;289724;289725;289726;289727;289728;289729;289730;289731 229355;229356;229357;229358;229359;229360;229361;229362;229363;229364;229365;229366;229367 229357 13 MEADPELSK Oxidation (M) 1034.459 0.45902619 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 17.459 17.648 2 0.0051475 18171 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 71.425 43.901 103660000 0 0 0 4785100 5172500 7540300 6252300 4889200 5639600 7945600 9302900 15834000 13190000 10920000 12191000 34561 528 31439 289732;289733;289734;289735;289736;289737;289738;289739;289740;289741;289742;289743 229368;229369;229370;229371;229372;229373;229374;229375 229369 688 7 MEADPELSK Unmodified 1018.4641 0.46411156 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 27.884 27.626 2 0.0050948 30151 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 83.783 65 354160000 13370000 0 0 18958000 19955000 26436000 23530000 23619000 13664000 32019000 34340000 39225000 24106000 30441000 54492000 34562 528 31439 289744;289745;289746;289747;289748;289749;289750;289751;289752;289753;289754;289755;289756 229376;229377;229378;229379;229380;229381;229382;229383;229384;229385;229386;229387;229388;229389;229390 229390 14 MEAERGPER Acetyl (Protein N-term) 1115.503 0.50295669 2384 Q14166 TTLL12 Tubulin--tyrosine ligase-like protein 12 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.238 23.443 2 0.013165 25003 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.692 51.541 73000000 0 0 0 3102700 2868300 7478900 2920500 3085100 1895200 7160500 6296000 7473800 4073300 8106100 18539000 34563 2384 31440 289757;289758;289759;289760;289761;289762;289763;289764;289765;289766;289767;289768 229391 229391 0 MEAFQELR Acetyl (Protein N-term);Oxidation (M) 1080.491 0.49099502 3897 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 1 1 0 By MS/MS By MS/MS By matching By matching 10 0 4 1 1 1 1 69.081 69.061 2 0.0077273 79240 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 44.349 35.93 10194000 0 0 0 2778700 0 0 2213100 0 0 0 2957600 0 2244300 0 0 34564 3897 31441 289769;289770;289771;289772 229392;229393 229392 5401 2 MEAFQELRK Acetyl (Protein N-term);Oxidation (M) 1208.586 0.58595803 3897 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 1 1 1 By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.24 3.19 2 2 13 3 1 1 2 1 1 1 1 2 1 1 1 1 58.46 57.305 2 0.0015468 70030 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 103.56 59.116 127580000 0 25343000 5043800 5039200 11166000 8301100 7876100 0 7252300 8435800 9196900 11664000 9311900 6939400 12012000 34565 3897 31442 289773;289774;289775;289776;289777;289778;289779;289780;289781;289782;289783;289784;289785;289786;289787;289788;289789 229394;229395;229396;229397;229398;229399;229400;229401;229402 229397 5401 6 MEAFQELRK Acetyl (Protein N-term) 1192.591 0.59104341 3897 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 76.725 76.58 2 0.0029754 87997 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 93.162 51.975 137690000 0 0 5558100 4279600 5458500 10644000 7074900 9389300 8811700 10943000 12753000 13415000 8774400 10413000 30171000 34566 3897 31442 289790;289791;289792;289793;289794;289795;289796;289797;289798;289799;289800;289801;289802 229403;229404;229405;229406;229407;229408;229409;229410;229411;229412;229413;229414;229415 229407 13 MEAGEGKER Acetyl (Protein N-term);Oxidation (M) 1063.4604 0.46042317 5232 Q9Y5E7 PCDHB2 Protocadherin beta-2 yes yes 1 1 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 9.32 9.4924 2 0.0041031 7718 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 68.915 58.042 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34567 5232 31443 289803;289804;289805;289806 229416;229417;229418;229419 229416 6636 4 MEAGEGKER Acetyl (Protein N-term) 1047.4655 0.46550855 5232 Q9Y5E7 PCDHB2 Protocadherin beta-2 yes yes 1 0 1 By MS/MS 10 0 1 1 21.757 21.918 2 0.035779 22746 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 50.127 38.758 5569900 0 0 0 0 0 0 0 0 0 5569900 0 0 0 0 0 34568 5232 31443 289807 229420 229420 0 MEALILEPSLYTVK Acetyl (Protein N-term);Oxidation (M) 1663.8743 0.87426071 1861 P61923 COPZ1 Coatomer subunit zeta-1 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.8 2 2 2 12 3 3 1 1 1 1 1 1 1 1 1 1 1 1 96.277 95.574 2 1.1499E-39 91773 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 164.9 151.31 949200000 117500000 484320000 0 6704800 21240000 30193000 23304000 22166000 17397000 54319000 36047000 38369000 21711000 29446000 46481000 34569 1861 31444 289808;289809;289810;289811;289812;289813;289814;289815;289816;289817;289818;289819;289820;289821;289822;289823;289824;289825 229421;229422;229423;229424;229425;229426;229427;229428;229429;229430;229431;229432;229433;229434;229435;229436;229437;229438;229439;229440;229441;229442;229443;229444;229445;229446 229431 3016 26 MEALILEPSLYTVK Acetyl (Protein N-term) 1647.8793 0.87934609 1861 P61923 COPZ1 Coatomer subunit zeta-1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.79 1 3 1 10 2 2 1 1 1 1 1 1 1 1 1 1 1 100.04 99.218 2 9.1284E-20 115525 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 135.66 129 3066300000 96071000 2882600000 8351700 0 3073600 2112700 2091500 5284000 1933000 16312000 12471000 6401100 0 6043100 23532000 34570 1861 31444 289826;289827;289828;289829;289830;289831;289832;289833;289834;289835;289836;289837;289838;289839;289840 229447;229448;229449;229450;229451;229452;229453;229454;229455;229456;229457;229458;229459;229460;229461 229456 15 MEALIPVINK Acetyl (Protein N-term) 1168.6526 0.65258104 154 O00429 DNM1L Dynamin-1-like protein yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.65 3.66 1 3 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 96.363 95.254 2 2.1922E-06 115410 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.06 122.12 1592100000 19423000 1339900000 1422800 5207300 12088000 22714000 12724000 17062000 10123000 33173000 20737000 21875000 15564000 21281000 38776000 34571 154 31445 289841;289842;289843;289844;289845;289846;289847;289848;289849;289850;289851;289852;289853;289854;289855;289856;289857 229462;229463;229464;229465;229466;229467;229468;229469;229470;229471;229472;229473;229474;229475;229476;229477;229478;229479;229480;229481;229482;229483 229467 22 MEALIPVINK Acetyl (Protein N-term);Oxidation (M) 1184.6475 0.64749566 154 O00429 DNM1L Dynamin-1-like protein yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.26 3.96 1 6 2 10 4 3 2 1 1 1 1 1 1 1 1 1 1 85.553 84.722 2 0.00036862 97231 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 79.906 76.16 605740000 39270000 179020000 2775400 24176000 0 0 53689000 28424000 36745000 50478000 40852000 49255000 31823000 31327000 37911000 34572 154 31445 289858;289859;289860;289861;289862;289863;289864;289865;289866;289867;289868;289869;289870;289871;289872;289873;289874;289875;289876 229484;229485;229486;229487;229488;229489;229490;229491;229492;229493;229494;229495;229496;229497;229498;229499 229493 217 14 MEANGLGPQGFPELK Acetyl (Protein N-term) 1628.7868 0.78684269 816 P06132 UROD Uroporphyrinogen decarboxylase yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 6.6 4.18 1 1 3 1 1 1 1 1 88.426 87.322 2 5.9579E-07 106117 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.6 87.437 75706000 0 62982000 0 0 0 0 0 0 0 0 1855500 1561800 0 0 9306700 34573 816 31446 289877;289878;289879;289880;289881 229500;229501;229502;229503 229500 4 MEANGLGPQGFPELK Acetyl (Protein N-term);Oxidation (M) 1644.7818 0.78175731 816 P06132 UROD Uroporphyrinogen decarboxylase yes yes 1 1 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By matching 7.75 3.9 2 6 1 1 1 1 1 1 1 1 87.866 88.679 2;3 2.5232E-10 89880 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 107.09 90.457 67887000 14273000 13438000 0 1339400 0 0 0 0 0 6462800 6370600 7009400 0 5318100 13675000 34574 816 31446 289882;289883;289884;289885;289886;289887;289888;289889 229504;229505;229506;229507 229504 984 4 MEAPGLAQAAAAESDSRK Acetyl (Protein N-term);Oxidation (M) 1859.8683 0.86834049 1673 P51817 PRKX cAMP-dependent protein kinase catalytic subunit PRKX yes yes 1 1 1 By MS/MS 2.5 0.5 1 1 2 63.15 57.814 2 0.00076973 73929 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 50.024 33.392 13752000 0 13752000 0 0 0 0 0 0 0 0 0 0 0 0 0 34575 1673 31447 289890;289891 229508 229508 2684 1 MEAPGLAQAAAAESDSRK Acetyl (Protein N-term) 1843.8734 0.87342586 1673 P51817 PRKX cAMP-dependent protein kinase catalytic subunit PRKX yes yes 1 0 1 By MS/MS 2 0 1 1 76.53 71.693 2 6.0136E-10 89596 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.62 114.88 28306000 0 28306000 0 0 0 0 0 0 0 0 0 0 0 0 0 34576 1673 31447 289892 229509 229509 1 MEAPTVETPPDPSPPSAPAPALVPLRAPDVAR Acetyl (Protein N-term);Oxidation (M) 3303.6809 0.68092764 582 O94763 URI1 Unconventional prefoldin RPB5 interactor 1 yes yes 1 1 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 88.128 88.222 3 6.4413E-17 102489 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 50.757 48.753 16466000 0 0 0 0 0 3281400 0 0 0 0 0 8331200 0 4853700 0 34577 582 31448 289893;289894;289895 229510;229511;229512 229512 739 3 MEASSEPPLDAK Acetyl (Protein N-term);Oxidation (M) 1331.5915 0.59149692 3096 Q7Z4G1 COMMD6 COMM domain-containing protein 6 yes yes 1 1 0 By MS/MS 1 0 1 1 99.381 104.64 2 0.0080471 83744 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 53.237 50.078 9497500 9497500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34578 3096 31449 289896 229513 229513 4706 1 MEASVILPILK Acetyl (Protein N-term) 1254.7257 0.72574598 3175 Q86VW0 SESTD1 SEC14 domain and spectrin repeat-containing protein 1 yes yes 1 0 0 By MS/MS 2 0 1 1 100.96 96.246 2 8.6031E-10 118948 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.57 136.57 28332000 0 28332000 0 0 0 0 0 0 0 0 0 0 0 0 0 34579 3175 31450 289897 229514 229514 1 MEATGVLPFVR Acetyl (Protein N-term);Oxidation (M) 1276.6486 0.64855829 2228 Q13045 FLII Protein flightless-1 homolog yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 87.92 87.99 2 2.6345E-06 101675 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 124.23 114.32 128420000 0 0 0 7442600 8969900 11148000 9377400 6843400 7984300 12449000 12501000 14821000 10415000 9772700 16694000 34580 2228 31451 289898;289899;289900;289901;289902;289903;289904;289905;289906;289907;289908;289909 229515;229516;229517;229518;229519;229520;229521;229522;229523;229524;229525;229526;229527;229528;229529 229522 3621 15 MEATGVLPFVR Acetyl (Protein N-term) 1260.6536 0.65364367 2228 Q13045 FLII Protein flightless-1 homolog yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 94.615 94.722 2 4.8975E-05 109890 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 108.98 97.374 47746000 0 0 0 0 4416300 0 3522700 4263400 0 0 7235400 8899200 5016700 0 14392000 34581 2228 31451 289910;289911;289912;289913;289914;289915;289916;289917 229530;229531;229532;229533;229534;229535;229536;229537;229538 229531 9 MEATLEQHLEDTMK Acetyl (Protein N-term) 1716.7699 0.76987199 337 O43504 LAMTOR5 Ragulator complex protein LAMTOR5 yes yes 1 0 0 By MS/MS By MS/MS 2 0 2 1 1 91.094 86.198 2 2.2876E-67 107104 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 232.42 205.63 348310000 0 348310000 0 0 0 0 0 0 0 0 0 0 0 0 0 34582 337 31452 289918;289919 229539;229540;229541;229542 229540 4 MEATLEQHLEDTMK Acetyl (Protein N-term);Oxidation (M) 1732.7648 0.76478662 337 O43504 LAMTOR5 Ragulator complex protein LAMTOR5 yes yes 1 1 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 81.631 78.12 2 4.2452E-61 97014 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 211.22 191.98 161590000 0 159180000 2408600 0 0 0 0 0 0 0 0 0 0 0 0 34583 337 31452 289920;289921;289922 229543;229544;229545 229543 425 1 MEAVATATAAK Acetyl (Protein N-term) 1104.5485 0.5485099 3834 Q96F63 CCDC97 Coiled-coil domain-containing protein 97 yes yes 1 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 65.436 65.516 2 0.00024756 74062 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 77.379 62.541 52212000 0 0 0 2345800 2595200 2266200 2904500 0 2338100 4283100 6686100 7328300 4328100 5960600 11176000 34584 3834 31453 289923;289924;289925;289926;289927;289928;289929;289930;289931;289932;289933 229546;229547;229548;229549;229550;229551;229552;229553 229551 8 MEAVATATAAK Acetyl (Protein N-term);Oxidation (M) 1120.5434 0.54342452 3834 Q96F63 CCDC97 Coiled-coil domain-containing protein 97 yes yes 1 1 0 By MS/MS 1 0 1 1 99.753 105.02 2 0.00045636 84328 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 90.108 65.953 11597000 11597000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34585 3834 31453 289934 229554;229555 229555 5353 2 MEAVLNELVSVEDLLK Acetyl (Protein N-term) 1842.9649 0.96486663 5161 Q9Y3D6 FIS1 Mitochondrial fission 1 protein yes yes 1 0 0 By MS/MS By MS/MS 2 0.707 1 2 1 2 2 107.74 104.92 2 1.2356E-45 126823 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 182.02 158.29 134900000 59261000 75640000 0 0 0 0 0 0 0 0 0 0 0 0 0 34586 5161 31454 289935;289936;289937;289938 229556;229557;229558;229559 229556 4 MEAVLNELVSVEDLLK Acetyl (Protein N-term);Oxidation (M) 1858.9598 0.95978125 5161 Q9Y3D6 FIS1 Mitochondrial fission 1 protein yes yes 1 1 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 104.44 98.943 2 0.00038288 120545 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 67.456 59.152 29340000 2321000 27019000 0 0 0 0 0 0 0 0 0 0 0 0 0 34587 5161 31454 289939;289940;289941 229560;229561 229560 6536 2 MEAVPDVERK Oxidation (M) 1188.5809 0.58087266 4287 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 28.088 23.771 3 0.0069955 30012 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 56.404 41.261 101570000 4473800 93310000 3786900 0 0 0 0 0 0 0 0 0 0 0 0 34588 4287 31455 289942;289943;289944;289945 229562;229563 229563 5752 2 MEAVPDVERK Unmodified 1172.586 0.58595803 4287 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O yes yes 0 0 1 By MS/MS 2.5 0.5 2 2 4 37.616 32.832 2;3 0.030329 43178 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.111 57.815 183030000 0 183030000 0 0 0 0 0 0 0 0 0 0 0 0 0 34589 4287 31455 289946;289947;289948;289949 229564;229565 229564 0 MEAYVPSEEEK Oxidation (M) 1326.5649 0.56494782 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 30.049 30.294 2 0.00038934 33242 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 80.231 75.933 45532000 0 0 0 0 3493900 3972400 4166300 0 3601600 0 4792700 7812700 0 5234700 12457000 34590 3443 31456 289950;289951;289952;289953;289954;289955;289956;289957;289958;289959;289960 229566;229567;229568;229569;229570;229571;229572;229573;229574;229575 229575 4982 10 MEAYVPSEEEK Unmodified 1310.57 0.5700332 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 39.146 39.46 2 0.0031325 42631 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.944 63.097 88032000 0 0 0 0 0 6368900 6148300 7474200 5457800 10636000 10132000 11699000 7332100 8455800 14327000 34591 3443 31456 289961;289962;289963;289964;289965;289966;289967;289968;289969;289970 229576;229577;229578;229579;229580;229581;229582;229583;229584;229585 229579 10 MECPHLSSSVCIAPDSAK Acetyl (Protein N-term) 2029.8907 0.89073219 5285 Q9Y6I4 USP3 Ubiquitin carboxyl-terminal hydrolase 3 yes yes 1 0 0 By MS/MS 2 0 2 2 77.883 73.108 2;3 2.4529E-81 91149 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 188.09 171.56 129830000 0 129830000 0 0 0 0 0 0 0 0 0 0 0 0 0 34592 5285 31457 289971;289972 229586;229587;229588 229588 3 MEDAALTEALSFTFVERSK Unmodified 2144.046 0.0459705 2799 Q5THJ4 VPS13D Vacuolar protein sorting-associated protein 13D yes yes 0 0 1 By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 6 1 1 1 1 1 1 70.467 70.673 3 0.015648 81190 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 19.036 15.008 37743000 0 0 0 0 0 0 4628800 5881600 0 5974200 5948400 8860400 0 6450000 0 34593 2799 31458 289973;289974;289975;289976;289977;289978 229589 229589 1 MEDDIDK Unmodified 864.3535 0.35349848 514 O75530 EED Polycomb protein EED yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 30.944 31.105 2 0.02139 33535 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 106.76 26.384 191360000 0 0 0 0 13804000 15129000 13958000 28176000 11056000 21603000 0 23832000 40276000 23526000 0 34594 514 31459 289979;289980;289981;289982;289983;289984;289985;289986;289987 229590;229591;229592;229593;229594;229595 229592 6 MEDEDEQGWCK Unmodified 1425.5177 0.51768005 5030 Q9UNF0 PACSIN2 Protein kinase C and casein kinase substrate in neurons protein 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 31.724 31.412 2 8.8971E-06 38346 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 143.7 143.7 58120000 0 25215000 0 2389100 2285900 3364600 2243800 3446300 1880100 3737200 3903800 0 3082700 0 6570700 34595 5030 31460 289988;289989;289990;289991;289992;289993;289994;289995;289996;289997;289998 229596;229597;229598;229599;229600;229601;229602;229603 229598 8 MEDEDEQGWCK Oxidation (M) 1441.5126 0.51259467 5030 Q9UNF0 PACSIN2 Protein kinase C and casein kinase substrate in neurons protein 2 yes yes 0 1 0 By MS/MS 2 0 1 1 27.283 23.023 2 0.0018836 30187 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.67 85.67 7087300 0 7087300 0 0 0 0 0 0 0 0 0 0 0 0 0 34596 5030 31460 289999 229604 229604 6374 1 MEDEERQK Acetyl (Protein N-term) 1105.471 0.47098786 4077 Q99996 AKAP9 A-kinase anchor protein 9 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 13.712 13.533 2 0.025222 15285 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.198 54.529 29705000 0 12088000 0 0 0 1771800 0 0 1374100 2583300 2317200 3301100 0 2523300 3746900 34597 4077 31461 290000;290001;290002;290003;290004;290005;290006;290007 229605;229606;229607 229605 3 MEDEEVAESWEEAADSGEIDRRLEK Acetyl (Protein N-term);Oxidation (M) 2980.288 0.28800428 3092 Q7Z422 SZRD1 SUZ domain-containing protein 1 yes yes 1 1 2 By MS/MS 2 0 1 1 86.699 78.569 3 9.5038E-20 102316 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.625 84.568 21252000 21252000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34598 3092 31462 290008 229608 229608 4699 1 MEDEEVAESWEEAADSGEIDRRLEK Acetyl (Protein N-term) 2964.2931 0.29308966 3092 Q7Z422 SZRD1 SUZ domain-containing protein 1 yes yes 1 0 2 By MS/MS 2 0 1 1 90.107 81.977 3 4.0661E-27 106452 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 99.999 98.209 22927000 22927000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34599 3092 31462 290009 229609;229610 229609 2 MEDENNRLR Unmodified 1175.5353 0.53531945 615 O94992 HEXIM1 Protein HEXIM1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 10.925 11.092 3 0.0025732 8356 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 88.948 74.741 146670000 0 0 0 0 8995200 10397000 0 0 7747500 13948000 12063000 0 18511000 23342000 51665000 34600 615 31463 290010;290011;290012;290013;290014;290015;290016;290017 229611;229612;229613;229614 229612 3 MEDENNRLR Oxidation (M) 1191.5302 0.53023407 615 O94992 HEXIM1 Protein HEXIM1 yes yes 0 1 1 By matching By MS/MS By matching By matching 10 0 4 1 1 1 1 7.0668 7.3105 3 0.014056 5346 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 66.621 41.846 40573000 0 0 0 0 0 0 0 0 0 0 15381000 9227200 3219800 0 12744000 34601 615 31463 290018;290019;290020;290021 229615 229615 755 0 MEDEVVR Acetyl (Protein N-term);Oxidation (M) 934.4066 0.40659669 1149 P23193 TCEA1 Transcription elongation factor A protein 1 yes yes 1 1 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 29.64 29.469 2 0.0098881 32088 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 49.358 32.065 17987000 0 0 0 3928200 3690100 5048600 5319900 0 0 0 0 0 0 0 0 34602 1149 31464 290022;290023;290024;290025 229616;229617 229616 1645 2 MEDEVVRFAK Acetyl (Protein N-term) 1264.6122 0.61217279 1149 P23193 TCEA1 Transcription elongation factor A protein 1 yes yes 1 0 1 By MS/MS By MS/MS 2.4 0.49 3 2 2 3 79.781 74.836 2 4.8147E-07 95437 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 171.56 156.89 764080000 40103000 723980000 0 0 0 0 0 0 0 0 0 0 0 0 0 34603 1149 31465 290026;290027;290028;290029;290030 229618;229619;229620 229620 2 MEDEVVRFAK Acetyl (Protein N-term);Oxidation (M) 1280.6071 0.60708741 1149 P23193 TCEA1 Transcription elongation factor A protein 1 yes yes 1 1 1 By MS/MS By MS/MS 2.67 0.471 1 2 2 1 63.778 57.701 2 1.676E-11 70941 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 166.09 146.3 161440000 17827000 143620000 0 0 0 0 0 0 0 0 0 0 0 0 0 34604 1149 31465 290031;290032;290033 229621;229622;229623 229622 1645 3 MEDLDQSPLVSSSDSPPRPQPAFK Acetyl (Protein N-term);Oxidation (M) 2685.2592 0.25921075 4566 Q9NQC3 RTN4 Reticulon-4 yes yes 1 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 77.443 77.482 3 6.7969E-45 89341 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 108.4 102.18 187960000 0 0 0 10347000 15027000 18626000 16881000 14801000 12577000 14882000 23509000 28907000 16555000 15847000 0 34605 4566 31466 290034;290035;290036;290037;290038;290039;290040;290041;290042;290043;290044 229624;229625;229626;229627;229628;229629;229630;229631;229632;229633;229634;229635;229636;229637 229631 5975 14 MEDLDQSPLVSSSDSPPRPQPAFK Acetyl (Protein N-term) 2669.2643 0.26429613 4566 Q9NQC3 RTN4 Reticulon-4 yes yes 1 0 1 By MS/MS 10 0 1 1 83.4 83.592 3 1.2498E-05 96763 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 41.904 39.464 4838600 0 0 0 0 0 0 0 4838600 0 0 0 0 0 0 0 34606 4566 31466 290045 229638 229638 1 MEDLGENTMVLSTLR Acetyl (Protein N-term);2 Oxidation (M) 1781.8176 0.81755047 5278 Q9Y6D9 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes yes 1 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 81.704 81.758 2 4.4621E-21 94528 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 114.72 105.53 153250000 0 0 0 5220800 9898000 11103000 12835000 9838600 9281900 22066000 20889000 0 14151000 17281000 20688000 34607 5278 31467 290046;290047;290048;290049;290050;290051;290052;290053;290054;290055;290056 229639;229640;229641;229642;229643;229644;229645;229646;229647;229648;229649 229649 6683;6684 11 MEDLGENTMVLSTLR Acetyl (Protein N-term);Oxidation (M) 1765.8226 0.82263585 5278 Q9Y6D9 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 2 2 2 1 2 2 88.387 88.538 2 5.6843E-06 103867 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 76.522 61.961 32928000 0 0 0 0 0 0 0 3315500 0 6682500 4759700 2315400 0 4455000 11400000 34608 5278 31467 290057;290058;290059;290060;290061;290062;290063;290064;290065;290066;290067 229650;229651;229652;229653;229654;229655;229656;229657;229658;229659 229650 6683;6684 10 MEDLGENTMVLSTLR Acetyl (Protein N-term) 1749.8277 0.82772122 5278 Q9Y6D9 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes yes 1 0 0 By MS/MS By MS/MS 10 0 2 1 1 94.275 94.444 2 0.00045112 109516 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.536 55.959 3705300 0 0 0 0 0 0 0 980200 0 0 0 0 0 0 2725100 34609 5278 31467 290068;290069 229660 229660 1 MEDSMDMDMSPLRPQNYLFGCELK Acetyl (Protein N-term);4 Oxidation (M) 3012.232 0.23195142 830 P06748 NPM1 Nucleophosmin yes yes 1 4 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 86.113 86.126 3 2.6006E-12 99741 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 68.375 65.388 174850000 0 0 0 6895100 29514000 25778000 19167000 39279000 25837000 0 0 0 28385000 0 0 34610 830 31468 290070;290071;290072;290073;290074;290075;290076 229661;229662;229663;229664;229665;229666;229667 229661 1008;1009;1010;1011 7 MEDSMDMDMSPLRPQNYLFGCELK Acetyl (Protein N-term);3 Oxidation (M) 2996.237 0.2370368 830 P06748 NPM1 Nucleophosmin yes yes 1 3 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.62 3.61 7 2 4 2 5 2 1 1 2 90.647 87.434 3 7.1432E-15 104515 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 80.683 79.784 289460000 30113000 222750000 11844000 0 0 0 0 2216600 0 0 0 0 0 1660800 20878000 34611 830 31468 290077;290078;290079;290080;290081;290082;290083;290084;290085;290086;290087;290088;290089 229668;229669;229670;229671;229672;229673;229674;229675;229676;229677;229678;229679;229680;229681 229676 1008;1009;1010;1011 13 MEDSMDMDMSPLRPQNYLFGCELK Acetyl (Protein N-term);2 Oxidation (M) 2980.2421 0.24212218 830 P06748 NPM1 Nucleophosmin yes yes 1 2 1 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 2 3 1 94.157 89.142 3 8.812E-25 112061 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.67 99.947 274140000 64172000 200410000 9559400 0 0 0 0 0 0 0 0 0 0 0 0 34612 830 31468 290090;290091;290092;290093;290094;290095 229682;229683;229684;229685;229686;229687;229688;229689;229690 229683 1008;1009;1010;1011 9 MEDSMDMDMSPLRPQNYLFGCELK Acetyl (Protein N-term);Oxidation (M) 2964.2472 0.24720756 830 P06748 NPM1 Nucleophosmin yes yes 1 1 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 96.57 91.438 3 1.531E-19 114773 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.389 93.143 325730000 85832000 235720000 4175900 0 0 0 0 0 0 0 0 0 0 0 0 34613 830 31468 290096;290097;290098 229691;229692;229693;229694 229692 1008;1009;1010;1011 4 MEDSMDMDMSPLRPQNYLFGCELK Acetyl (Protein N-term) 2948.2523 0.25229293 830 P06748 NPM1 Nucleophosmin yes yes 1 0 1 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 3 1 98.111 93.439 2;3 6.9344E-148 116173 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 215.45 204.82 220060000 52032000 160980000 7049800 0 0 0 0 0 0 0 0 0 0 0 0 34614 830 31468 290099;290100;290101;290102;290103 229695;229696;229697;229698;229699 229696 5 MEDSVGCLETAEEVK Oxidation (M) 1711.7281 0.72806676 1356 P35579 MYH9 Myosin-9 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.8 2.76 2 2 21 2 2 2 2 2 2 1 2 1 1 2 3 2 1 54.973 54.04 2;3 1.1093E-168 61687 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 218.62 202.99 924140000 9252100 108090000 0 58800000 64942000 95952000 81885000 42162000 82077000 75190000 67993000 80225000 64828000 47944000 44796000 34615 1356 31469 290104;290105;290106;290107;290108;290109;290110;290111;290112;290113;290114;290115;290116;290117;290118;290119;290120;290121;290122;290123;290124;290125;290126;290127;290128 229700;229701;229702;229703;229704;229705;229706;229707;229708;229709;229710;229711;229712;229713;229714;229715;229716;229717;229718;229719;229720 229715 2080 20 MEDSVGCLETAEEVK Unmodified 1695.7332 0.73315214 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 61.304 60.124 2 1.378E-39 77756 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 140.31 125.64 1475600000 8308900 434300000 0 42295000 49270000 119500000 62643000 50634000 86270000 101900000 100310000 128950000 86004000 81398000 123850000 34616 1356 31469 290129;290130;290131;290132;290133;290134;290135;290136;290137;290138;290139;290140;290141;290142;290143 229721;229722;229723;229724;229725;229726;229727;229728;229729;229730;229731;229732;229733;229734;229735;229736 229729 16 MEDTLVNNVPLPNTLPLPK Oxidation (M) 2120.1187 0.11874151 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.53 1.88 1 16 1 1 2 1 1 1 2 1 1 2 2 1 1 90.559 90.336 2;3 1.6815E-87 111531 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 178.58 161.37 173950000 0 28724000 0 1148100 14276000 5064700 4395700 8026200 12792000 17668000 12723000 28239000 11301000 10492000 19103000 34617 5216 31470 290144;290145;290146;290147;290148;290149;290150;290151;290152;290153;290154;290155;290156;290157;290158;290159;290160 229737;229738;229739;229740;229741;229742;229743;229744;229745;229746;229747;229748 229739 6621 12 MEDTLVNNVPLPNTLPLPK Unmodified 2104.1238 0.12382689 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 2 2 2 1 2 2 92.225 91.96 2;3 9.2742E-68 113346 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 149.32 135.07 64290000 0 47204000 0 0 0 0 0 1421800 0 3444500 2624900 1282200 0 1427600 6884500 34618 5216 31470 290161;290162;290163;290164;290165;290166;290167;290168;290169;290170;290171;290172 229749;229750;229751;229752 229749 4 MEDTPLVISK Acetyl (Protein N-term);Oxidation (M) 1189.59 0.59004036 4136 Q9BT73 PSMG3 Proteasome assembly chaperone 3 yes yes 1 1 0 By MS/MS 1 0 1 1 103.68 108.95 2 0.0042441 89047 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 72.325 59.288 41084000 41084000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34619 4136 31471 290173 229753 229753 5618 1 MEDTPLVISK Acetyl (Protein N-term) 1173.5951 0.59512574 4136 Q9BT73 PSMG3 Proteasome assembly chaperone 3 yes yes 1 0 0 By MS/MS By MS/MS 1.33 0.471 2 1 2 1 97.425 96.767 2 0.0016824 90567 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 91.584 78.005 121900000 69051000 52847000 0 0 0 0 0 0 0 0 0 0 0 0 0 34620 4136 31471 290174;290175;290176 229754;229755;229756;229757 229754 4 MEDTSFPSGGNAIGVNSASSK Unmodified 2054.9215 0.92149827 3371 Q8N8S7 ENAH Protein enabled homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.152 60.257 2 2.8784E-63 68612 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 140.74 132.83 143590000 0 0 0 7735300 8198300 9967700 10443000 9176000 6078000 12333000 13593000 15132000 10678000 13062000 27192000 34621 3371 31472 290177;290178;290179;290180;290181;290182;290183;290184;290185;290186;290187;290188 229758;229759;229760;229761;229762;229763;229764;229765;229766;229767;229768;229769;229770 229767 13 MEDTSFPSGGNAIGVNSASSK Oxidation (M) 2070.9164 0.91641289 3371 Q8N8S7 ENAH Protein enabled homolog yes yes 0 1 0 By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.017 55.148 2 7.7638E-88 62439 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 170.11 164.39 117290000 0 0 0 7734800 7577800 8321600 8946600 7371300 6851600 8641600 12172000 16480000 11755000 8641300 12797000 34622 3371 31472 290189;290190;290191;290192;290193;290194;290195;290196;290197;290198;290199;290200 229771;229772;229773;229774;229775 229773 4946 5 MEDYQAAEETAFVVDEVSNIVK Acetyl (Protein N-term);Oxidation (M) 2544.1578 0.15776537 1944 P63172 DYNLT1 Dynein light chain Tctex-type 1 yes yes 1 1 0 By MS/MS 2 0 2 2 103.02 98.289 2;3 8.6212E-44 121500 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.34 103.62 12087000 0 12087000 0 0 0 0 0 0 0 0 0 0 0 0 0 34623 1944 31473 290201;290202 229776;229777 229777 3122 2 MEEADALIESLCR Oxidation (M) 1551.6909 0.69089339 4011 Q99460 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 80.552 80.591 2 1.7067E-09 93338 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 114.83 110.54 21540000 0 0 0 0 2448700 2682600 0 0 0 5491700 4538000 6379200 0 0 0 34624 4011 31474 290203;290204;290205;290206;290207 229778;229779;229780;229781 229780 5500 4 MEEANIQPNR Oxidation (M) 1216.5506 0.55063516 1464 P42704 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 18.64 18.828 2 0.0018143 18002 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.438 67.347 18992000 0 0 0 1387700 1710600 2824900 1273100 974940 1261100 2195600 1677000 1901900 0 1206100 2579000 34625 1464 31475 290208;290209;290210;290211;290212;290213;290214;290215;290216;290217;290218 229782;229783;229784;229785;229786;229787;229788;229789 229785 2300 8 MEEANIQPNR Unmodified 1200.5557 0.55572054 1464 P42704 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 26.614 26.799 2 0.0023495 27841 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.498 65.519 32263000 0 0 0 4172000 0 5310400 0 6786400 0 4573500 0 0 0 3889000 7531300 34626 1464 31475 290219;290220;290221;290222;290223;290224 229790;229791;229792 229791 1 MEEANLASR Unmodified 1019.4706 0.47059393 4436 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 yes yes 0 0 0 By MS/MS 10 0 1 1 23.961 24.292 2 0.035371 24615 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 46.129 12.613 2726000 0 0 0 0 0 0 0 0 0 0 0 0 0 2726000 0 34627 4436 31476 290225 229793 229793 1 MEEDPDDVPHGHITSLAVK Oxidation (M) 2104.9735 0.97353384 1435 P41227 NAA10 N-alpha-acetyltransferase 10 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.77 3.53 8 2 25 4 3 3 2 1 1 4 1 3 2 4 3 2 2 54.212 53.458 3;4 1.8939E-38 60883 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 111.66 106.21 2253600000 122990000 22918000 113400000 11716000 8272300 31324000 65484000 98318000 151010000 222060000 469170000 844950000 49746000 0 42294000 34628 1435 31477 290226;290227;290228;290229;290230;290231;290232;290233;290234;290235;290236;290237;290238;290239;290240;290241;290242;290243;290244;290245;290246;290247;290248;290249;290250;290251;290252;290253;290254;290255;290256;290257;290258;290259;290260 229794;229795;229796;229797;229798;229799;229800;229801;229802;229803;229804;229805;229806;229807;229808;229809;229810;229811;229812;229813;229814;229815;229816;229817;229818;229819;229820 229816 2253 18 MEEDPDDVPHGHITSLAVK Unmodified 2088.9786 0.97861922 1435 P41227 NAA10 N-alpha-acetyltransferase 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.06 3.36 6 2 24 2 4 2 1 2 3 3 3 4 5 1 2 58.843 57.656 2;3;4 1.7913E-31 64661 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 109.72 104.29 1695100000 116540000 165120000 113140000 0 0 11713000 24290000 112650000 67663000 130920000 294530000 629250000 10467000 0 18852000 34629 1435 31477 290261;290262;290263;290264;290265;290266;290267;290268;290269;290270;290271;290272;290273;290274;290275;290276;290277;290278;290279;290280;290281;290282;290283;290284;290285;290286;290287;290288;290289;290290;290291;290292 229821;229822;229823;229824;229825;229826;229827;229828;229829;229830;229831;229832;229833;229834;229835;229836;229837;229838;229839;229840;229841;229842;229843;229844;229845;229846;229847;229848;229849;229850;229851;229852;229853;229854;229855;229856;229857;229858;229859;229860;229861;229862;229863 229849 37 MEEDQELERK Acetyl (Protein N-term);Oxidation (M) 1363.5926 0.59255956 914 P0DPB6;P0DPB5 yes no 1 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.08 2.5 2 1 22 1 2 1 2 2 2 1 2 2 2 2 2 2 2 25.875 25.642 2 0.0017747 26901 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 103.55 93.023 152820000 0 33345000 0 8054500 8954100 14797000 12414000 0 9856200 10662000 14554000 10278000 6631600 10275000 13000000 34630 914 31478 290293;290294;290295;290296;290297;290298;290299;290300;290301;290302;290303;290304;290305;290306;290307;290308;290309;290310;290311;290312;290313;290314;290315;290316;290317 229864;229865;229866;229867;229868;229869;229870;229871;229872;229873;229874;229875;229876 229875 1181 10 MEEDQELERK Acetyl (Protein N-term) 1347.5976 0.59764493 914 P0DPB6;P0DPB5 yes no 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 39.052 38.504 2 5.0265E-11 47743 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 172.59 158.39 235090000 0 89130000 0 6983000 8083200 9021600 7588200 8242200 6937900 13268000 12744000 18952000 11722000 10663000 31754000 34631 914 31478 290318;290319;290320;290321;290322;290323;290324;290325;290326;290327;290328;290329;290330;290331 229877;229878;229879;229880;229881;229882;229883;229884;229885;229886;229887;229888;229889;229890;229891 229880 15 MEEEIAALVIDNGSGMCK Acetyl (Protein N-term);2 Oxidation (M) 2039.885 0.88497811 1951 P63261 ACTG1 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed yes yes 1 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 90.924 91.015 2 1.3645E-20 105808 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 100.55 99.717 29050000 0 0 0 0 2197300 3363400 0 0 1845500 4451400 3615600 4831700 2496400 2431400 3817700 34632 1951 31479 290332;290333;290334;290335;290336;290337;290338;290339;290340;290341 229892;229893;229894;229895;229896;229897;229898;229899;229900;229901;229902;229903;229904 229903 3135;3136 13 MEEEIAALVIDNGSGMCK Acetyl (Protein N-term);Oxidation (M) 2023.8901 0.89006348 1951 P63261 ACTG1 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed yes yes 1 1 0 By MS/MS 2 0 2 2 97.97 93.202 2 1.3058E-74 117314 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 179.8 174.07 85713000 0 85713000 0 0 0 0 0 0 0 0 0 0 0 0 0 34633 1951 31479 290342;290343 229905;229906 229906 3135;3136 2 MEEEIAALVIDNGSGMCK Acetyl (Protein N-term) 2007.8951 0.89514886 1951 P63261 ACTG1 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed yes yes 1 0 0 By MS/MS 2 0 1 1 100.74 96.022 2 1.1016E-71 118650 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 217.91 207.25 88448000 0 88448000 0 0 0 0 0 0 0 0 0 0 0 0 0 34634 1951 31479 290344 229907 229907 1 MEEEQDLPEQPVK Acetyl (Protein N-term);Oxidation (M) 1628.724 0.72396766 4017 Q99504 EYA3 Eyes absent homolog 3 yes yes 1 1 0 By MS/MS 1 0 1 1 97.798 103.06 2 0.0095781 81946 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 41.399 27.63 6568600 6568600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34635 4017 31480 290345 229908 229908 5518 0 MEEESGAPGVPSGNGAPGPK Unmodified 1866.8418 0.84179138 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 41.646 41.824 2;3 2.6665E-37 46370 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 147.7 145.47 854960000 0 0 0 34970000 46352000 63912000 52522000 74539000 47726000 87878000 89396000 81401000 84334000 69278000 122650000 34636 1681 31481 290346;290347;290348;290349;290350;290351;290352;290353;290354;290355;290356;290357;290358;290359;290360;290361;290362;290363;290364;290365;290366;290367;290368;290369 229909;229910;229911;229912;229913;229914;229915;229916;229917;229918;229919;229920;229921;229922;229923 229915 14 MEEESGAPGVPSGNGAPGPK Oxidation (M) 1882.8367 0.83670601 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.79 2.98 1 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42.351 42.924 2 1.7646E-193 41165 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 214.23 208 412900000 7989800 0 0 22037000 26920000 31239000 28628000 29940000 34161000 34319000 39822000 35318000 56783000 35117000 30624000 34637 1681 31481 290370;290371;290372;290373;290374;290375;290376;290377;290378;290379;290380;290381;290382;290383 229924;229925;229926;229927;229928;229929;229930;229931;229932;229933;229934;229935 229932 2700 11 MEEESQSQGRDLTLEENQVK Unmodified 2349.0754 0.075432727 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 45.096 45.303 3 0.0081193 50949 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 29.892 21.74 32265000 0 0 0 0 0 0 4919200 3974700 3830500 6352600 6701100 0 0 6487200 0 34638 2431 31482 290384;290385;290386;290387;290388;290389 229936;229937;229938 229936 3 MEEETEVRESEK Unmodified 1494.6508 0.65080272 4376 Q9H307 PNN Pinin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 1 2 1 1 2 2 2 2 2 16.512 16.773 2;3 1.6758E-05 15147 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 77.185 69.46 96248000 0 0 0 0 1239900 1585700 8419800 0 1822300 6250000 11376000 17896000 15072000 12889000 19695000 34639 4376 31483 290390;290391;290392;290393;290394;290395;290396;290397;290398;290399;290400;290401;290402;290403;290404;290405 229939;229940;229941;229942;229943;229944;229945;229946 229944 7 MEEGGRDK Acetyl (Protein N-term) 962.41274 0.4127447 2252 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 1 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 9.4397 8.8714 2 0.030755 7952 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 58.596 44.439 748400000 37689000 628420000 0 7769600 9732800 13429000 5745400 5183500 3560700 0 0 23076000 0 3463000 10332000 34640 2252 31484 290406;290407;290408;290409;290410;290411;290412;290413;290414;290415;290416 229947;229948;229949;229950 229947 1 MEEGGRDK Acetyl (Protein N-term);Oxidation (M) 978.40766 0.40765932 2252 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 1 1 1 By MS/MS 10 0 1 1 5.7109 5.9857 2 0.015648 3627 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 56.011 47.065 1440200 0 0 0 0 0 0 0 0 0 0 1440200 0 0 0 0 34641 2252 31484 290417 229951 229951 3668 1 MEEGHGLDLTYITER Acetyl (Protein N-term);Oxidation (M) 1820.8251 0.82507869 2854 Q68CZ2 TNS3 Tensin-3 yes yes 1 1 0 By MS/MS By matching By matching By MS/MS 10 0 4 1 1 1 1 78.821 78.978 2 3.3223E-06 91113 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 77.593 62.054 17301000 0 0 0 0 0 0 4559500 2729400 3136600 6875400 0 0 0 0 0 34642 2854 31485 290418;290419;290420;290421 229952;229953 229953 4512 2 MEEIGILVEK Acetyl (Protein N-term);Oxidation (M) 1217.6213 0.62134049 1482 P43686 PSMC4 26S protease regulatory subunit 6B yes yes 1 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.49 1 1 1 9 1 2 1 1 1 1 1 1 1 1 1 84.828 84.631 2 0.00010355 99654 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.71 99.929 378820000 117550000 109590000 0 4377200 13952000 17072000 4644900 3223300 5692300 32900000 28073000 41748000 0 0 0 34643 1482 31486 290422;290423;290424;290425;290426;290427;290428;290429;290430;290431;290432;290433 229954;229955;229956;229957;229958;229959;229960;229961;229962;229963;229964 229957 2329 11 MEEIGILVEK Acetyl (Protein N-term) 1201.6264 0.62642587 1482 P43686 PSMC4 26S protease regulatory subunit 6B yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.63 1 2 1 10 2 2 1 1 1 1 1 1 1 1 1 1 95.362 94.653 2 2.4176E-06 92762 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 138.08 138.08 866480000 152820000 648550000 0 0 6194500 4710900 0 1574200 1729600 15358000 12978000 12452000 1044200 2336200 6734500 34644 1482 31486 290434;290435;290436;290437;290438;290439;290440;290441;290442;290443;290444;290445;290446;290447 229965;229966;229967;229968;229969;229970;229971;229972;229973;229974;229975;229976;229977;229978;229979;229980 229971 16 MEEIGRISIEMNGTLEDQLSHLK Unmodified 2642.3044 0.30438681 356 O43707 ACTN4 Alpha-actinin-4 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.745 1 2 3 4 2 95.916 92.915 3;4 5.9589E-81 95503 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 141.36 124.29 240550000 212050000 28497000 0 0 0 0 0 0 0 0 0 0 0 0 0 34645 356 31487 290448;290449;290450;290451;290452;290453 229981;229982;229983;229984;229985;229986;229987;229988;229989;229990 229987 9 MEEIGRISIEMNGTLEDQLSHLK Oxidation (M) 2658.2993 0.29930143 356 O43707 ACTN4 Alpha-actinin-4 yes yes 0 1 1 By MS/MS By MS/MS 2.33 0.471 4 2 5 1 89.643 83.086 3;4 2.0429E-108 109493 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 187.62 179.91 190900000 187650000 3252000 0 0 0 0 0 0 0 0 0 0 0 0 0 34646 356 31487 290454;290455;290456;290457;290458;290459 229991;229992;229993;229994;229995;229996 229996 449;451 5 MEEIGRISIEMNGTLEDQLSHLK 2 Oxidation (M) 2674.2942 0.29421605 356 O43707 ACTN4 Alpha-actinin-4 yes yes 0 2 1 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 85.118 79.427 4 0.00010159 96686 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 57.826 56.408 36883000 28635000 8247500 0 0 0 0 0 0 0 0 0 0 0 0 0 34647 356 31487 290460;290461 229997;229998 229997 449;451 2 MEELDGEPTVTLIPGVNSK Acetyl (Protein N-term) 2070.0191 0.019087047 4200 Q9BW27 NUP85 Nuclear pore complex protein Nup85 yes yes 1 0 0 By MS/MS 10 0 1 1 93.956 94.097 2 0.0025321 109052 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.616 39.232 2252300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2252300 34648 4200 31488 290462 229999 229999 1 MEELDGEPTVTLIPGVNSK Acetyl (Protein N-term);Oxidation (M) 2086.014 0.014001669 4200 Q9BW27 NUP85 Nuclear pore complex protein Nup85 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 88.213 88.319 2 3.8932E-05 102736 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 52.555 46.831 22396000 0 0 0 0 0 0 0 0 0 0 0 8675800 4738500 8981300 0 34649 4200 31488 290463;290464;290465 230000;230001;230002 230001 5678 3 MEELHNQEVQK Unmodified 1383.6453 0.64526383 2508 Q15233 NONO Non-POU domain-containing octamer-binding protein yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 2 1 1 1 18.916 19.142 2;3 0.00018851 19734 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 75.819 61.584 196370000 0 0 0 11784000 9091800 12988000 13717000 11572000 7550400 22116000 16432000 27373000 15255000 11583000 36908000 34650 2508 31489 290466;290467;290468;290469;290470;290471;290472;290473;290474;290475;290476;290477;290478 230003;230004;230005;230006;230007;230008;230009;230010;230011;230012 230012 9 MEELLRR Acetyl (Protein N-term) 987.51715 0.51715019 4481 Q9HA64 FN3KRP Ketosamine-3-kinase yes yes 1 0 1 By MS/MS 10 0 1 1 73.92 74.259 2 0.036612 85096 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.167 21.598 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34651 4481 31490 290479 230013 230013 1 MEELSADEIRR Acetyl (Protein N-term) 1389.6558 0.65582851 623 O95155 UBE4B Ubiquitin conjugation factor E4 B yes yes 1 0 1 By MS/MS By matching By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 67.209 67.528 2 0.0029825 76819 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.297 38.723 24823000 0 0 0 0 0 0 2569000 0 0 0 0 8053100 0 3084600 11116000 34652 623 31491 290480;290481;290482;290483;290484 230014;230015 230015 2 MEEMGVQGGR Unmodified 1092.4692 0.46921372 266 O15234 CASC3 Protein CASC3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 24.296 24.796 2 0.0058 25328 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.494 34.681 5823700 0 0 0 0 0 0 0 0 0 0 0 0 0 1563400 4260300 34653 266 31492 290485;290486;290487;290488 230016;230017;230018;230019 230016 4 MEEQGLADASLLK Oxidation (M) 1419.6915 0.69154532 4831 Q9UBB4 ATXN10 Ataxin-10 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65.121 64.002 2 2.0541E-29 72660 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 152.64 123.94 983190000 14568000 622070000 5484700 14381000 16642000 50675000 28839000 15299000 14668000 40741000 31669000 42586000 33173000 23208000 29181000 34654 4831 31493 290489;290490;290491;290492;290493;290494;290495;290496;290497;290498;290499;290500;290501;290502;290503 230020;230021;230022;230023;230024;230025;230026;230027;230028;230029;230030;230031;230032;230033;230034;230035;230036;230037 230027 6202 12 MEEQGLADASLLK Unmodified 1403.6966 0.6966307 4831 Q9UBB4 ATXN10 Ataxin-10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 71.11 69.911 2 6.4303E-25 87974 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 178.81 153.19 2234700000 22812000 1853000000 5096700 16131000 12914000 40640000 18592000 22922000 13813000 41571000 41773000 33395000 25303000 32870000 53886000 34655 4831 31493 290504;290505;290506;290507;290508;290509;290510;290511;290512;290513;290514;290515;290516;290517;290518;290519 230038;230039;230040;230041;230042;230043;230044;230045;230046;230047;230048;230049;230050;230051;230052;230053;230054;230055;230056;230057;230058 230043 20 MEESEPERK Acetyl (Protein N-term) 1175.5129 0.51285267 4941 Q9UJV9 DDX41 Probable ATP-dependent RNA helicase DDX41 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 19.34 19.568 2 0.010185 19858 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 55.112 40.954 37338000 0 0 0 0 2851300 2608900 1979300 2601400 2369500 3872600 4825500 4701800 3693400 3805400 4028900 34656 4941 31494 290520;290521;290522;290523;290524;290525;290526;290527;290528;290529;290530 230059;230060;230061;230062;230063;230064;230065;230066 230065 8 MEESVNQMQPLNEK Acetyl (Protein N-term);2 Oxidation (M) 1749.755 0.75495021 916 P10155 TROVE2 60 kDa SS-A/Ro ribonucleoprotein yes yes 1 2 0 By MS/MS By MS/MS 1 0 2 1 1 86.686 91.949 2 2.1201E-49 69118 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 185.77 173.15 8628400 8628400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34657 916 31495 290531;290532 230067;230068 230067 1183;1184 2 MEESVNQMQPLNEK Acetyl (Protein N-term);Oxidation (M) 1733.76 0.76003559 916 P10155 TROVE2 60 kDa SS-A/Ro ribonucleoprotein yes yes 1 1 0 By MS/MS 1 0 1 1 100.21 105.47 2 3.3629E-12 84964 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 111.52 104.99 5668200 5668200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34658 916 31495 290533 230069 230069 1183;1184 0 MEESVNQMQPLNEK Acetyl (Protein N-term) 1717.7651 0.76512097 916 P10155 TROVE2 60 kDa SS-A/Ro ribonucleoprotein yes yes 1 0 0 By MS/MS 10 0 1 1 72.293 72.459 2 0.00011092 82364 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 77.379 46.49 19935000 0 0 0 0 0 0 0 0 0 0 0 0 0 19935000 0 34659 916 31495 290534 230070 230070 1 MEESYDLK Oxidation (M) 1029.4325 0.43247709 1545 P48594 SERPINB4 Serpin B4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 25.21 25.112 2 0.0033049 26689 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 108.46 97.092 54974000 0 0 0 47449000 2186100 2545000 0 0 0 2794300 0 0 0 0 0 34660 1545 31496 290535;290536;290537;290538 230071 230071 2453 1 MEESYDLK Unmodified 1013.4376 0.43756246 1545 P48594 SERPINB4 Serpin B4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 33.484 33.255 2 0.013044 36576 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 73.248 56.693 32917000 0 0 0 26013000 2194800 0 0 0 0 4710000 0 0 0 0 0 34661 1545 31496 290539;290540;290541 230072 230072 1 MEETPTEYLQR Unmodified 1395.634 0.63403044 3421 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 yes yes 0 0 0 By MS/MS 10 0 1 1 55.664 55.831 2 0.011898 63475 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 67.334 39.562 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34662 3421 31497 290542 230073 230073 1 MEETPTEYLQR Oxidation (M) 1411.6289 0.62894506 3421 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 yes yes 0 1 0 By MS/MS 10 0 1 1 51.075 50.545 2 0.0033484 57626 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 76.465 38.379 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34663 3421 31497 290543 230074 230074 4967 1 MEETQNVQLNK Unmodified 1332.6344 0.63436479 4473 Q9H9H4 VPS37B Vacuolar protein sorting-associated protein 37B yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 31.443 29.472 2 0.0061806 31834 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.825 45.571 15470000 0 6777500 0 0 0 0 0 0 0 0 0 0 0 0 8692000 34664 4473 31498 290544;290545 230075;230076 230076 2 MEEVAEAAPQELDTIALASEK Oxidation (M) 2260.0781 0.078058489 3292 Q8IZ73 RPUSD2 RNA pseudouridylate synthase domain-containing protein 2 yes yes 0 1 0 By MS/MS 2.5 0.5 2 2 4 85.583 81.578 2;3 4.6122E-47 101357 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.66 106.82 95350000 0 95350000 0 0 0 0 0 0 0 0 0 0 0 0 0 34665 3292 31499 290546;290547;290548;290549 230077;230078 230077 4891 2 MEEVAEAAPQELDTIALASEK Unmodified 2244.0831 0.083143867 3292 Q8IZ73 RPUSD2 RNA pseudouridylate synthase domain-containing protein 2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 88.015 83.986 3 5.476E-30 104314 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.63 107.14 112980000 0 112980000 0 0 0 0 0 0 0 0 0 0 0 0 0 34666 3292 31499 290550;290551 230079;230080;230081;230082 230080 4 MEEVPHDCPGADSAQAGR Acetyl (Protein N-term);Oxidation (M) 1983.8051 0.8050883 1713 P53384 NUBP1 Cytosolic Fe-S cluster assembly factor NUBP1 yes yes 1 1 0 By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 37.005 37.246 2 8.1173E-05 41051 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 51.774 51.774 39158000 0 0 0 0 2445400 3090100 3186700 2408900 1567900 3460500 3529200 4128500 3154500 3917200 8269200 34667 1713 31500 290552;290553;290554;290555;290556;290557;290558;290559;290560;290561;290562 230083;230084;230085;230086 230086 2768 4 MEEVPHDCPGADSAQAGR Acetyl (Protein N-term) 1967.8102 0.81017368 1713 P53384 NUBP1 Cytosolic Fe-S cluster assembly factor NUBP1 yes yes 1 0 0 By MS/MS 10 0 1 1 50.039 50.261 2 5.9833E-05 55937 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 60.628 58.239 5950900 0 0 0 0 0 0 0 0 0 0 0 0 0 5950900 0 34668 1713 31500 290563 230087 230087 1 MEEVVIAGMSGK Acetyl (Protein N-term);2 Oxidation (M) 1323.605 0.6050385 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 1 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.31 3.72 1 6 3 19 4 5 1 1 2 1 2 1 1 2 2 2 1 2 2 57.144 56.038 2 2.7959E-06 62074 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.937 70.474 369180000 39764000 123880000 2126600 6930400 4590500 20828000 10429000 5049200 6656400 26231000 29315000 32105000 8752000 22367000 30155000 34669 1565 31501 290564;290565;290566;290567;290568;290569;290570;290571;290572;290573;290574;290575;290576;290577;290578;290579;290580;290581;290582;290583;290584;290585;290586;290587;290588;290589;290590;290591;290592 230088;230089;230090;230091;230092;230093;230094;230095;230096;230097;230098;230099;230100;230101;230102;230103;230104;230105;230106;230107;230108;230109;230110;230111;230112;230113;230114;230115;230116;230117;230118;230119 230099 2493;2498 29 MEEVVIAGMSGK Acetyl (Protein N-term);Oxidation (M) 1307.6101 0.61012387 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.48 2 4 2 24 2 6 2 2 2 2 2 2 2 2 2 2 2 2 78.415 78.076 2 1.1038E-14 89500 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 139.15 129.76 2131100000 309360000 1473300000 0 10699000 12079000 43096000 18972000 13842000 15329000 37714000 36924000 46891000 20054000 30734000 62078000 34670 1565 31501 290593;290594;290595;290596;290597;290598;290599;290600;290601;290602;290603;290604;290605;290606;290607;290608;290609;290610;290611;290612;290613;290614;290615;290616;290617;290618;290619;290620;290621;290622;290623;290624 230120;230121;230122;230123;230124;230125;230126;230127;230128;230129;230130;230131;230132;230133;230134;230135;230136;230137;230138;230139;230140;230141;230142;230143;230144;230145;230146;230147;230148;230149;230150;230151 230136 2493;2498 29 MEEVVIAGMSGK Acetyl (Protein N-term) 1291.6152 0.61520925 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.65 3.66 1 3 1 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 92.037 91.155 2 8.3728E-11 92113 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 125.74 115.51 7075200000 1041700000 5590000000 0 10935000 14078000 60043000 14984000 17191000 13076000 53494000 48079000 39054000 16476000 33256000 122810000 34671 1565 31501 290625;290626;290627;290628;290629;290630;290631;290632;290633;290634;290635;290636;290637;290638;290639;290640;290641 230152;230153;230154;230155;230156;230157;230158;230159;230160;230161;230162;230163;230164;230165;230166;230167;230168;230169;230170;230171;230172;230173;230174;230175;230176;230177;230178 230167 27 MEFAAENEGK Acetyl (Protein N-term);Oxidation (M) 1182.4863 0.48630357 4698 Q9NWK9 ZNHIT6 Box C/D snoRNA protein 1 yes yes 1 1 0 By MS/MS 1 0 1 1 100.98 106.25 2 0.034472 85828 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 43.282 32.416 1167900 1167900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34672 4698 31502 290642 230179 230179 1 MEFAELIK Acetyl (Protein N-term) 1021.5154 0.51541885 3960 Q96QG7 MTMR9 Myotubularin-related protein 9 yes yes 1 0 0 By MS/MS 2 0 1 1 98.624 93.89 2 0.0036246 116177 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.992 78.359 34234000 0 34234000 0 0 0 0 0 0 0 0 0 0 0 0 0 34673 3960 31503 290643 230180 230180 1 MEFDLGAALEPTSQK Acetyl (Protein N-term);Oxidation (M) 1693.7869 0.78690227 4299 Q9GZP8 IMUP Immortalization up-regulated protein yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.7 4.08 4 2 2 12 3 5 1 1 1 1 1 1 1 1 1 1 1 1 90.788 90.162 2 8.2712E-53 90151 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 166.7 143.33 572410000 136510000 242660000 0 9352700 9581500 11093000 13850000 11998000 14952000 21703000 28398000 13326000 13992000 17180000 27818000 34674 4299 31504 290644;290645;290646;290647;290648;290649;290650;290651;290652;290653;290654;290655;290656;290657;290658;290659;290660;290661;290662;290663 230181;230182;230183;230184;230185;230186;230187;230188;230189;230190;230191;230192;230193;230194;230195;230196;230197;230198;230199;230200;230201;230202 230190 5763 22 MEFDLGAALEPTSQK Acetyl (Protein N-term) 1677.792 0.79198764 4299 Q9GZP8 IMUP Immortalization up-regulated protein yes yes 1 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 5.9 4.13 2 2 1 5 2 3 1 1 1 1 1 97.517 96.562 2 2.3154E-81 99686 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 205.12 179.99 348290000 147360000 188350000 0 0 1201200 0 0 752200 0 2730300 3655300 0 0 0 4237600 34675 4299 31504 290664;290665;290666;290667;290668;290669;290670;290671;290672;290673 230203;230204;230205;230206;230207;230208;230209;230210;230211 230211 9 MEFDLGAALEPTSQKPGVGAGHGGDPK Acetyl (Protein N-term);Oxidation (M) 2723.2861 0.2860942 4299 Q9GZP8 IMUP Immortalization up-regulated protein yes yes 1 1 1 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 83.609 77.907 3 8.0188E-07 94883 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 44.3 38.682 18525000 9237400 9287700 0 0 0 0 0 0 0 0 0 0 0 0 0 34676 4299 31505 290674;290675 230212;230213 230212 5763 2 MEFMYSGVENK Oxidation (M) 1349.5632 0.56317368 3871 Q96HW7 INTS4 Integrator complex subunit 4 yes yes 0 1 0 By MS/MS 2 0 1 1 58.287 52.456 2 0.035082 67505 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 49.418 40.505 10397000 0 10397000 0 0 0 0 0 0 0 0 0 0 0 0 0 34677 3871 31506 290676 230214 230214 1 MEFMYSGVENK Unmodified 1333.5683 0.56825906 3871 Q96HW7 INTS4 Integrator complex subunit 4 yes yes 0 0 0 By MS/MS 2 0 1 1 69.21 63.342 2 0.0083204 80782 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.258 68.478 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34678 3871 31506 290677 230215 230215 1 MEFQAVVMAVGGGSR Acetyl (Protein N-term);2 Oxidation (M) 1611.7385 0.73851229 4593 Q9NR50 EIF2B3 Translation initiation factor eIF-2B subunit gamma yes yes 1 2 0 By MS/MS 10 0 1 1 89.976 90.091 2 0.00042819 104599 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 44.299 37.916 1054400 0 0 0 0 0 0 0 0 0 1054400 0 0 0 0 0 34679 4593 31507 290678 230216 230216 5995;5996 1 MEFSGRK Acetyl (Protein N-term);Oxidation (M) 911.4171 0.41710179 1583 P49643 PRIM2 DNA primase large subunit yes yes 1 1 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 16.608 16.748 2 0.017621 15493 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.358 27.656 36654000 0 0 0 3355200 3056800 5692500 0 2962200 3138000 5273300 0 7244800 0 0 5931400 34680 1583 31508 290679;290680;290681;290682;290683;290684;290685;290686 230217;230218;230219 230218 2549 0 MEGAEINK Oxidation (M) 906.41168 0.41168206 4043 Q99661 KIF2C Kinesin-like protein KIF2C yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 8.6194 8.6939 2 0.02544 5719 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 50.966 24.857 25252000 0 0 0 2715500 2825700 2463000 3198800 1813400 2255500 0 0 3491800 3969600 2519000 0 34681 4043 31509 290687;290688;290689;290690;290691;290692;290693;290694;290695 230220;230221;230222;230223 230221 4 MEGAEINK Unmodified 890.41677 0.41676744 4043 Q99661 KIF2C Kinesin-like protein KIF2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.617 15.787 2 0.011003 14376 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 77.923 17.564 136110000 0 0 0 7935800 6561700 8171400 10163000 6317900 7253900 11161000 12652000 16762000 10070000 15182000 23881000 34682 4043 31509 290696;290697;290698;290699;290700;290701;290702;290703;290704;290705;290706;290707 230224;230225;230226;230227;230228 230225 5 MEGCVSNLMVCNLAYSGK Acetyl (Protein N-term) 2073.8992 0.89918838 549 O75832 PSMD10 26S proteasome non-ATPase regulatory subunit 10 yes yes 1 0 0 By MS/MS 2 0 1 1 93.806 88.91 2 3.3924E-05 110361 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.25 96.572 41323000 0 41323000 0 0 0 0 0 0 0 0 0 0 0 0 0 34683 549 31510 290708 230229;230230 230230 2 MEGDAVEAIVEESETFIK Acetyl (Protein N-term);Oxidation (M) 2053.9402 0.94016802 1587 P49711 CTCF Transcriptional repressor CTCF yes yes 1 1 0 By MS/MS 2 0 1 1 101.44 96.731 2 5.0254E-06 119542 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.451 74.889 11125000 0 11125000 0 0 0 0 0 0 0 0 0 0 0 0 0 34684 1587 31511 290709 230231;230232 230232 2551 2 MEGGFGSDFGGSGSGK Acetyl (Protein N-term);Oxidation (M) 1533.6042 0.60418687 5239 Q9Y5L4 TIMM13 Mitochondrial import inner membrane translocase subunit Tim13 yes yes 1 1 0 By MS/MS By MS/MS 1 0 2 1 1 102.05 105.13 2 5.3948E-11 87219 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 109.22 102.69 6570100 1539700 5030400 0 0 0 0 0 0 0 0 0 0 0 0 0 34685 5239 31512 290710;290711 230233;230234 230233 6639 1 MEGGHFVPPGK Unmodified 1154.5543 0.55426398 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.09 3.85 4 7 1 1 2 1 1 1 1 1 1 1 34.242 32.723 3 0.0052377 41747 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 56.548 51.489 200610000 70019000 45716000 26169000 4260200 0 6169800 7628400 0 4858000 0 5621100 13190000 0 0 16979000 34686 4285 31513 290712;290713;290714;290715;290716;290717;290718;290719;290720;290721;290722 230235;230236;230237;230238;230239;230240 230238 5 MEGGIEEFKPPESNQK Unmodified 1818.8458 0.84581413 4820 Q9P2K3 RCOR3 REST corepressor 3 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 53.781 54.028 3 0.033743 61140 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 27.255 19.277 39974000 0 0 0 5353300 0 0 0 0 5469600 0 5085700 16764000 0 0 7302100 34687 4820 31514 290723;290724;290725;290726;290727 230241 230241 1 MEGGTENDLR Oxidation (M) 1136.4768 0.47680152 4230 Q9BXP5 SRRT Serrate RNA effector molecule homolog yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.465 12.614 2 0.0019722 10598 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 78.113 25.327 68930000 0 0 0 3424600 3796700 5989200 5647300 3368600 4939000 6988700 7056700 8355900 6183900 6702600 6476600 34688 4230 31515 290728;290729;290730;290731;290732;290733;290734;290735;290736;290737;290738;290739 230242;230243;230244;230245;230246;230247;230248;230249;230250;230251;230252;230253 230249 5706 11 MEGGTENDLR Unmodified 1120.4819 0.48188689 4230 Q9BXP5 SRRT Serrate RNA effector molecule homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.594 18.792 2 0.0041248 19253 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 73.985 31.698 148500000 0 0 0 7818000 8207200 9871400 9025400 9833900 6481700 14785000 12976000 15549000 12143000 9069400 32735000 34689 4230 31515 290740;290741;290742;290743;290744;290745;290746;290747;290748;290749;290750;290751 230254;230255;230256;230257;230258;230259;230260;230261;230262;230263;230264;230265 230265 4 MEGGTENDLRILEQEEEEEQAGKPGEPSK Oxidation (M) 3244.4678 0.46775956 4230 Q9BXP5 SRRT Serrate RNA effector molecule homolog yes yes 0 1 2 By MS/MS 2 0 2 2 76.275 68.144 3;4 2.1801E-33 89886 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.338 89.593 92889000 92889000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34690 4230 31516 290752;290753 230266;230267 230266 5706 2 MEGGTENDLRILEQEEEEEQAGKPGEPSK Unmodified 3228.4728 0.47284494 4230 Q9BXP5 SRRT Serrate RNA effector molecule homolog yes yes 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 76.734 71.245 4 7.1423E-138 91908 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 153.99 151.82 108260000 88947000 0 19311000 0 0 0 0 0 0 0 0 0 0 0 0 34691 4230 31516 290754;290755 230268;230269 230268 2 MEGHEAMER Unmodified 1088.4379 0.43791359 3594 Q8WXI9 GATAD2B Transcriptional repressor p66-beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 8.4408 8.5935 2 0.020387 7017 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 53.166 43.926 20481000 0 0 0 0 1191800 894950 979680 984540 854840 1314500 4448900 2588200 1578600 2046700 3598400 34692 3594 31517 290756;290757;290758;290759;290760;290761;290762;290763;290764;290765;290766 230270;230271;230272 230272 3 MEGHEAMERLK Oxidation (M) 1345.6119 0.61185521 3594 Q8WXI9 GATAD2B Transcriptional repressor p66-beta yes yes 0 1 1 By MS/MS 2 0 1 1 15.73 11.618 3 0.018843 17163 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.569 35.76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34693 3594 31518 290767 230273 230273 5092 1 MEGISNFK Acetyl (Protein N-term) 966.44807 0.44806757 3905 Q96KB5 PBK Lymphokine-activated killer T-cell-originated protein kinase yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.08 3.52 1 2 10 2 1 1 1 1 1 1 1 1 1 1 1 75.695 75.131 2 0.00056187 88034 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.67 111.89 150400000 51939000 20090000 0 4535500 3739600 7472100 0 5436600 0 8009000 11015000 9400900 5707100 7979000 15079000 34694 3905 31519 290768;290769;290770;290771;290772;290773;290774;290775;290776;290777;290778;290779;290780 230274;230275;230276;230277;230278;230279;230280;230281;230282;230283;230284;230285;230286 230276 13 MEGISNFK Acetyl (Protein N-term);Oxidation (M) 982.44298 0.44298219 3905 Q96KB5 PBK Lymphokine-activated killer T-cell-originated protein kinase yes yes 1 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.3 3.41 1 1 8 2 1 1 1 1 1 1 1 1 55.478 55.341 2 0.0018794 56353 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 70.69 53.325 126930000 63856000 0 0 7563700 0 0 9284400 5487900 7297400 0 7383100 0 8653700 8034200 9369900 34695 3905 31519 290781;290782;290783;290784;290785;290786;290787;290788;290789;290790 230287;230288;230289;230290;230291;230292;230293;230294;230295;230296 230292 5406 8 MEGLDDGPDFLSEEDRGLK Acetyl (Protein N-term);Oxidation (M) 2179.9579 0.95794335 5032 Q9UNH7 SNX6 Sorting nexin-6;Sorting nexin-6, N-terminally processed yes yes 1 1 1 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 1 3 1 83.486 79.113 2;3 9.833E-222 98776 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 251.84 227.58 135570000 9432300 123800000 2335400 0 0 0 0 0 0 0 0 0 0 0 0 34696 5032 31520 290791;290792;290793;290794;290795 230297;230298;230299;230300;230301 230297 6381 4 MEGLDDGPDFLSEEDRGLK Acetyl (Protein N-term) 2163.963 0.96302873 5032 Q9UNH7 SNX6 Sorting nexin-6;Sorting nexin-6, N-terminally processed yes yes 1 0 1 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 1 3 1 89.828 85.449 2;3 2.4256E-147 106735 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 222.55 211.64 126410000 11847000 112650000 1910200 0 0 0 0 0 0 0 0 0 0 0 0 34697 5032 31520 290796;290797;290798;290799;290800 230302;230303;230304;230305;230306;230307 230302 6 MEGNAEESTLFCFAVRGQAGGK Unmodified 2358.0733 0.073264658 2040 Q00610 CLTC Clathrin heavy chain 1 yes yes 0 0 1 By MS/MS 3 0 1 1 84.444 80.808 3 0.0066475 81923 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 31.358 28.517 2318700 2318700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34698 2040 31521 290801 230308 230308 1 MEGPAEWGPEAALGPEAVLR Acetyl (Protein N-term);Oxidation (M) 2137.015 0.015004722 2706 Q53LP3 SOWAHC Ankyrin repeat domain-containing protein SOWAHC yes yes 1 1 0 By MS/MS 10 0 1 1 93.985 94.126 2 0.00017407 109078 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.209 38.888 1977300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1977300 34699 2706 31522 290802 230309;230310 230309 4361 2 MEGPLSVFGDR Acetyl (Protein N-term);Oxidation (M) 1264.5758 0.57578728 1067 P17987 TCP1 T-complex protein 1 subunit alpha yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 85.689 85.756 2 3.0653E-06 99881 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 122.26 110.21 508580000 0 0 0 18682000 20131000 44866000 34299000 20437000 22293000 55697000 61899000 60499000 35794000 47001000 86987000 34700 1067 31523 290803;290804;290805;290806;290807;290808;290809;290810;290811;290812;290813;290814 230311;230312;230313;230314;230315;230316;230317;230318;230319;230320;230321;230322;230323;230324;230325 230321 1514 15 MEGPLSVFGDR Acetyl (Protein N-term) 1248.5809 0.58087266 1067 P17987 TCP1 T-complex protein 1 subunit alpha yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 93.369 93.445 2 3.803E-05 108280 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 110.14 98.984 155200000 0 0 0 2887800 5010400 13003000 4814700 7695400 5478200 15334000 15749000 12327000 6709500 13311000 52880000 34701 1067 31523 290815;290816;290817;290818;290819;290820;290821;290822;290823;290824;290825;290826 230326;230327;230328;230329;230330;230331;230332;230333;230334;230335;230336;230337;230338;230339;230340;230341;230342 230332 17 MEGSGEQPGPQPQHPGDHR Acetyl (Protein N-term) 2081.8973 0.8973492 4936 Q9UJA5 TRMT6 tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 yes yes 1 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 29.591 30.045 3 8.0152E-06 31591 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.454 61.476 23090000 0 0 0 0 0 0 0 0 0 0 4391600 0 4176900 5658300 8863300 34702 4936 31524 290827;290828;290829;290830 230343;230344;230345 230343 3 MEGSLEREAPAGALAAVLK Acetyl (Protein N-term);Oxidation (M) 1970.0143 0.014276441 1569 P49366 DHPS Deoxyhypusine synthase yes yes 1 1 1 By MS/MS 2.67 0.471 1 2 3 90.998 87.219 2;3 4.6486E-05 104437 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 63.537 48.335 64978000 0 64978000 0 0 0 0 0 0 0 0 0 0 0 0 0 34703 1569 31525 290831;290832;290833 230346;230347;230348 230348 2507 3 MEGSLEREAPAGALAAVLK Acetyl (Protein N-term) 1954.0194 0.019361819 1569 P49366 DHPS Deoxyhypusine synthase yes yes 1 0 1 By MS/MS 2.5 0.5 2 2 4 95.497 91.467 2;3 4.8683E-21 113607 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.74 103.08 108270000 0 108270000 0 0 0 0 0 0 0 0 0 0 0 0 0 34704 1569 31525 290834;290835;290836;290837 230349;230350;230351 230350 2 MEGTISQQTK Unmodified 1121.5387 0.53867349 189 O14578 CIT Citron Rho-interacting kinase yes yes 0 0 0 By MS/MS 2 0 1 1 17.162 13.742 2 0.011745 18109 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.643 46.749 4186400 0 4186400 0 0 0 0 0 0 0 0 0 0 0 0 0 34705 189 31526 290838 230352 230352 1 MEGVAVVTAGSVGAAK Acetyl (Protein N-term);Oxidation (M) 1503.7603 0.76029359 4249 Q9BYE7 PCGF6 Polycomb group RING finger protein 6 yes yes 1 1 0 By MS/MS 1 0 1 1 102.81 108.08 2 0.0083748 88045 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 40.066 25.128 2523300 2523300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34706 4249 31527 290839 230353 230353 5715 1 MEGVAVVTAGSVGAAK Acetyl (Protein N-term) 1487.7654 0.76537896 4249 Q9BYE7 PCGF6 Polycomb group RING finger protein 6 yes yes 1 0 0 By MS/MS By MS/MS 1 0 2 1 1 104.83 105.73 2 0.00020339 97460 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 81.431 55.493 13113000 0 13113000 0 0 0 0 0 0 0 0 0 0 0 0 0 34707 4249 31527 290840;290841 230354;230355 230355 2 MEGVEEK Acetyl (Protein N-term) 862.37423 0.37423392 1072 P18124 RPL7 60S ribosomal protein L7 yes yes 1 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching By matching 8.71 3.15 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42.909 43.508 1;2 0.0041189 36573 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 91.906 67.934 159220000 4942900 4861000 0 6925300 6295500 7111500 7654300 5959800 6163200 12000000 19640000 20938000 17119000 17346000 22263000 34708 1072 31528 290842;290843;290844;290845;290846;290847;290848;290849;290850;290851;290852;290853;290854;290855 230356;230357;230358;230359 230356 4 MEGVEEK Acetyl (Protein N-term);Oxidation (M) 878.36915 0.36914855 1072 P18124 RPL7 60S ribosomal protein L7 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 13.494 13.708 2 0.0080435 12899 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 54.205 19.313 21476000 0 0 0 2014500 0 0 0 2651000 2193600 5302500 3827500 5486500 0 0 0 34709 1072 31528 290856;290857;290858;290859;290860;290861 230360;230361 230361 1524 2 MEGVTNAVLHEVK Unmodified 1425.7286 0.72859953 4282 Q9C0B1 FTO Alpha-ketoglutarate-dependent dioxygenase FTO yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 67.729 61.709 3 0.00358 76062 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 57.804 45.536 25097000 4112400 0 20985000 0 0 0 0 0 0 0 0 0 0 0 0 34710 4282 31529 290862;290863 230362 230362 1 MEGVTNAVLHEVK Oxidation (M) 1441.7235 0.72351415 4282 Q9C0B1 FTO Alpha-ketoglutarate-dependent dioxygenase FTO yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 58.17 53.322 3 0.0091865 66474 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 50.806 40.453 62978000 0 36042000 26936000 0 0 0 0 0 0 0 0 0 0 0 0 34711 4282 31529 290864;290865 230363 230363 5740 0 MEHPSKMEFFQK Acetyl (Protein N-term);Oxidation (M) 1595.7112 0.7112349 11 A2A288 ZC3H12D Probable ribonuclease ZC3H12D yes yes 1 1 1 By MS/MS 2 0 1 1 38.188 33.221 2 0.011876 43447 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 40.352 23.121 15274000 0 15274000 0 0 0 0 0 0 0 0 0 0 0 0 0 34712 11 31530 290866 230364 230364 13 1 MEIAELNR Unmodified 974.48552 0.48551571 103 CON__Q7Z794;Q7Z794 KRT77 Keratin, type II cytoskeletal 1b yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 2 1 1 1 1 1 1 1 1 49.358 49.462 2 0.0060247 55722 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 104.37 67.377 + 321160000 0 0 0 59336000 14531000 30422000 13842000 19113000 8863300 43334000 19182000 79112000 18292000 15137000 0 34713 103 31531 290867;290868;290869;290870;290871;290872;290873;290874;290875;290876;290877;290878 230365;230366;230367;230368;230369;230370;230371;230372;230373 230371 9 MEIAELNR Oxidation (M) 990.48043 0.48043033 103 CON__Q7Z794;Q7Z794 KRT77 Keratin, type II cytoskeletal 1b yes no 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 32.792 33.049 2 0.019526 35504 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 56.014 22.657 + 96154000 0 0 0 0 5798900 0 8251600 12352000 4725100 17891000 3951900 31886000 5090600 0 6206100 34714 103 31531 290879;290880;290881;290882;290883;290884;290885;290886;290887 230374;230375 230375 134 2 MEICSGSNK Unmodified 1024.4318 0.43176558 2558 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 15.545 15.578 2 0.045968 15352 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 43.083 30.727 10387000 0 0 0 854340 752820 0 1415500 0 1439400 1995800 0 0 3929400 0 0 34715 2558 31532 290888;290889;290890;290891;290892;290893 230376 230376 1 MEIDDFLSSFMEK Unmodified 1590.6946 0.69458179 3434 Q8NEZ2 VPS37A Vacuolar protein sorting-associated protein 37A yes yes 0 0 0 By MS/MS 2 0 1 1 99.749 91.618 2 0.0025292 118121 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.64 71.096 7385900 7385900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34716 3434 31533 290894 230377 230377 1 MEIDESNAGSSK Oxidation (M) 1282.5347 0.53471033 4979 Q9UKY1 ZHX1 Zinc fingers and homeoboxes protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 10.801 10.966 2 0.00023923 9134 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.338 70.628 14601000 0 0 0 0 1004100 1545500 1230900 0 1272300 1248200 1219600 1798100 1883200 1243300 2155700 34717 4979 31534 290895;290896;290897;290898;290899;290900;290901;290902;290903;290904 230378;230379;230380;230381;230382;230383;230384 230380 6326 7 MEIDESNAGSSK Unmodified 1266.5398 0.5397957 4979 Q9UKY1 ZHX1 Zinc fingers and homeoboxes protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.519 21.723 2 3.1642E-08 22507 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 128.81 112.61 108110000 0 0 0 6407400 4892700 10966000 7646600 8231700 6164200 12080000 11093000 9161100 13964000 6984400 10514000 34718 4979 31534 290905;290906;290907;290908;290909;290910;290911;290912;290913;290914;290915;290916 230385;230386;230387;230388;230389;230390;230391;230392;230393;230394;230395;230396 230393 12 MEIGDTLSTAEESSPPK Unmodified 1790.8244 0.82440998 4254 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 yes yes 0 0 0 By MS/MS 2 0 1 1 68.876 62.977 2 7.5411E-46 80281 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 148.62 99.315 17795000 0 17795000 0 0 0 0 0 0 0 0 0 0 0 0 0 34719 4254 31535 290917 230397 230397 1 MEIGLPDEK Unmodified 1030.5005 0.50049707 1504 P46459 NSF Vesicle-fusing ATPase yes yes 0 0 0 By MS/MS 2 0 1 1 65.694 59.776 2 0.012682 76502 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.783 63.263 23139000 0 23139000 0 0 0 0 0 0 0 0 0 0 0 0 0 34720 1504 31536 290918 230398 230398 1 MEIGTEISRK Acetyl (Protein N-term) 1204.6122 0.61217279 2960 Q6PJT7 ZC3H14 Zinc finger CCCH domain-containing protein 14 yes yes 1 0 1 By MS/MS 2.5 0.5 1 1 2 66.304 60.982 2 0.017256 74910 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 56.729 44.961 46107000 0 46107000 0 0 0 0 0 0 0 0 0 0 0 0 0 34721 2960 31537 290919;290920 230399;230400 230400 1 MEIGTEISRK Acetyl (Protein N-term);Oxidation (M) 1220.6071 0.60708741 2960 Q6PJT7 ZC3H14 Zinc finger CCCH domain-containing protein 14 yes yes 1 1 1 By MS/MS 2 0 1 1 47.316 41.753 2 0.0055101 54455 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 57.108 38.042 34518000 0 34518000 0 0 0 0 0 0 0 0 0 0 0 0 0 34722 2960 31537 290921 230401 230401 4587 0 MEIIRSNFK Acetyl (Protein N-term) 1178.6118 0.61177885 662 O95453 PARN Poly(A)-specific ribonuclease PARN yes yes 1 0 1 By MS/MS 2 0 1 1 86.783 78.652 2 0.0095636 102420 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.948 60.774 15771000 15771000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34723 662 31538 290922 230402 230402 1 MEIYRPHK Unmodified 1072.5488 0.54878467 2314;3658 Q92769;Q13547 HDAC2;HDAC1 Histone deacetylase 2;Histone deacetylase 1 no no 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 21.667 22.273 2 0.025633 22238 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 124.83 59.969 51137000 0 0 0 0 0 0 0 0 0 0 10547000 19709000 0 0 20881000 34724 3658;2314 31539 290923;290924;290925 230403 230403 0 MEKPPAPPSLPAGPPGVK Oxidation (M) 1784.9495 0.94949134 2534 Q15428 SF3A2 Splicing factor 3A subunit 2 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 2 1 1 1 1 63.228 63.309 3 2.5404E-22 72399 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 104.76 80.206 390320000 0 0 0 26489000 37130000 37476000 47059000 0 28687000 0 41633000 63823000 0 52805000 55217000 34725 2534 31540 290926;290927;290928;290929;290930;290931;290932;290933;290934;290935 230404;230405;230406;230407;230408;230409;230410;230411;230412;230413;230414;230415;230416;230417;230418 230404 4171 15 MEKPPAPPSLPAGPPGVK Unmodified 1768.9546 0.95457672 2534 Q15428 SF3A2 Splicing factor 3A subunit 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 67.93 67.658 3 1.0129E-20 76698 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 86.488 84.185 332500000 0 4442700 0 11786000 13361000 25754000 18722000 22046000 14757000 30079000 36237000 35888000 24677000 32581000 62165000 34726 2534 31540 290936;290937;290938;290939;290940;290941;290942;290943;290944;290945;290946;290947;290948 230419;230420;230421;230422;230423;230424 230423 4 MELAHSLLLNEEALAQITEAK Acetyl (Protein N-term);Oxidation (M) 2381.2148 0.21482674 4815 Q9P2D3 HEATR5B HEAT repeat-containing protein 5B yes yes 1 1 0 By MS/MS 2 0 2 2 100.52 95.806 3 3.5853E-30 118435 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.86 96.961 12824000 0 12824000 0 0 0 0 0 0 0 0 0 0 0 0 0 34727 4815 31541 290949;290950 230425;230426 230426 6181 2 MELAHSLLLNEEALAQITEAK Acetyl (Protein N-term) 2365.2199 0.21991212 4815 Q9P2D3 HEATR5B HEAT repeat-containing protein 5B yes yes 1 0 0 By MS/MS 2 0 1 1 102.88 98.149 3 1.6528E-47 121303 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.91 124.23 14544000 0 14544000 0 0 0 0 0 0 0 0 0 0 0 0 0 34728 4815 31541 290951 230427;230428 230428 2 MELDLEPDTSYGGTLR Oxidation (M) 1811.8247 0.82474434 3077 Q7Z309 FAM122B Protein FAM122B yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 73.638 73.735 2 1.7767E-15 85031 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 103.34 77.868 28826000 0 0 0 0 4733100 0 5929600 0 0 4467600 8359800 0 0 0 5336100 34729 3077 31542 290952;290953;290954;290955;290956;290957;290958 230429;230430;230431;230432;230433;230434 230429 4691 6 MELDLEPDTSYGGTLR Unmodified 1795.8298 0.82982971 3077 Q7Z309 FAM122B Protein FAM122B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 79.652 79.798 2 1.6572E-19 91881 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 108.72 83.862 22888000 0 0 0 0 0 0 0 0 0 5828600 0 0 0 3554700 13505000 34730 3077 31542 290959;290960;290961 230435;230436;230437 230436 2 MELDLEPDTSYGGTLRR Oxidation (M) 1967.9259 0.92585536 3077 Q7Z309 FAM122B Protein FAM122B yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.838 65.921 3 2.3159E-15 75406 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 97.836 87.737 220890000 0 0 0 8902400 9116600 16346000 14132000 17013000 13554000 16618000 24130000 28641000 15936000 18688000 37815000 34731 3077 31543 290962;290963;290964;290965;290966;290967;290968;290969;290970;290971;290972;290973 230438;230439;230440;230441;230442;230443;230444;230445;230446;230447;230448;230449;230450 230439 4691 13 MELDLEPDTSYGGTLRR Unmodified 1951.9309 0.93094074 3077 Q7Z309 FAM122B Protein FAM122B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 74.158 74.268 3 0.0010552 85102 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.005 37.277 145530000 0 0 0 0 3306900 10644000 3448500 10539000 0 14532000 10589000 18621000 10484000 11401000 51961000 34732 3077 31543 290974;290975;290976;290977;290978;290979;290980;290981;290982;290983 230451;230452;230453;230454;230455;230456 230452 6 MELGELLYNK Acetyl (Protein N-term);Oxidation (M) 1266.6166 0.61658946 4142 Q9BTE1 DCTN5 Dynactin subunit 5 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS 4.67 3.86 1 1 1 1 1 1 93.996 94.733 2 0.00089151 101058 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.04 55.192 24128000 8536400 2526900 0 0 0 0 0 0 0 0 0 0 0 0 13065000 34733 4142 31544 290984;290985;290986 230457;230458;230459 230457 5637 3 MELGELLYNK Acetyl (Protein N-term) 1250.6217 0.62167484 4142 Q9BTE1 DCTN5 Dynactin subunit 5 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS 4.25 3.34 2 1 1 2 1 1 97.054 94.47 2 0.0016758 111083 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.954 61.633 12155000 0 8819900 834800 0 0 0 0 0 0 0 0 0 0 0 2500000 34734 4142 31544 290987;290988;290989;290990 230460;230461;230462;230463 230460 4 MELGSCLEGGREAAEEEGEPEVK Acetyl (Protein N-term);Oxidation (M) 2563.1054 0.10541223 668 O95551 TDP2 Tyrosyl-DNA phosphodiesterase 2 yes yes 1 1 1 By MS/MS 2 0 1 1 73.025 67.48 3 9.6186E-19 85301 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.572 86.584 32313000 0 32313000 0 0 0 0 0 0 0 0 0 0 0 0 0 34735 668 31545 290991 230464 230464 812 1 MELILSTSPAELTLDPACQPK Acetyl (Protein N-term) 2355.1702 0.17018474 3703 Q93015 NAT6 N-acetyltransferase 6 yes yes 1 0 0 By MS/MS 2 0 1 1 101.88 97.169 3 2.9588E-09 120041 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.425 80.263 34809000 0 34809000 0 0 0 0 0 0 0 0 0 0 0 0 0 34736 3703 31546 290992 230465 230465 1 MELIQDTSRPPLEYVK Acetyl (Protein N-term);Oxidation (M) 1975.9925 0.99247837 907;1617 P0DMM9;P0DMN0;P50225 SULT1A3;SULT1A4;SULT1A1 Sulfotransferase 1A3;Sulfotransferase 1A4;Sulfotransferase 1A1 no no 1 1 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 8.27 3.19 3 2 17 4 1 1 1 1 2 2 2 2 1 2 1 2 83.898 83.152 2;3 3.5362E-45 102270 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 153.39 122.66 411530000 0 257530000 2719300 0 4405700 11121000 5259000 7011500 11773000 33778000 21213000 13201000 10380000 5264800 27882000 34737 907;1617 31547 290993;290994;290995;290996;290997;290998;290999;291000;291001;291002;291003;291004;291005;291006;291007;291008;291009;291010;291011;291012;291013;291014 230466;230467;230468;230469;230470;230471;230472;230473;230474;230475;230476;230477;230478;230479;230480 230470 1167 13 MELIQDTSRPPLEYVK Acetyl (Protein N-term) 1959.9976 0.99756374 907;1617 P0DMM9;P0DMN0;P50225 SULT1A3;SULT1A4;SULT1A1 Sulfotransferase 1A3;Sulfotransferase 1A4;Sulfotransferase 1A1 no no 1 0 1 By MS/MS By MS/MS 2.17 0.373 5 1 4 2 94.415 90.62 2;3 9.1901E-46 112137 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 188.4 167.15 399160000 0 396950000 2205400 0 0 0 0 0 0 0 0 0 0 0 0 34738 907;1617 31547 291015;291016;291017;291018;291019;291020 230481;230482;230483;230484;230485;230486 230481 6 MELITILEK Acetyl (Protein N-term);Oxidation (M) 1146.6206 0.62061221 2457 Q14974 KPNB1 Importin subunit beta-1 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.4 3.69 1 6 3 20 3 5 2 2 1 2 2 2 2 2 2 2 1 1 1 96.869 95.802 1;2 0.00051908 112101 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 97.431 97.431 1945000000 52014000 1413500000 42209000 8897300 9242000 29343000 20932000 18014000 19790000 97705000 75656000 57025000 12374000 24815000 63548000 34739 2457 31548 291021;291022;291023;291024;291025;291026;291027;291028;291029;291030;291031;291032;291033;291034;291035;291036;291037;291038;291039;291040;291041;291042;291043;291044;291045;291046;291047;291048;291049;291050 230487;230488;230489;230490;230491;230492;230493;230494;230495;230496;230497;230498;230499;230500;230501;230502;230503;230504;230505;230506;230507;230508;230509 230509 4043 22 MELITILEK Acetyl (Protein N-term) 1130.6257 0.62569758 2457 Q14974 KPNB1 Importin subunit beta-1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.71 3.81 2 1 4 2 1 1 1 1 1 101.66 99.399 2 0.00049835 121596 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.89 117.89 2311800000 69455000 2218100000 0 0 0 0 0 0 0 4143500 3641000 0 0 2589400 13844000 34740 2457 31548 291051;291052;291053;291054;291055;291056;291057 230510;230511;230512;230513;230514;230515;230516;230517 230511 8 MELLGEYVGQEGK Acetyl (Protein N-term) 1493.7072 0.70719538 4234 Q9BXV9 C14orf142 Uncharacterized protein C14orf142 yes yes 1 0 0 By MS/MS 2 0 1 1 97.578 92.805 2 2.7502E-19 114878 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 132.85 123.53 34754000 0 34754000 0 0 0 0 0 0 0 0 0 0 0 0 0 34741 4234 31549 291058 230518 230518 1 MELLGEYVGQEGKPQK Acetyl (Protein N-term) 1846.9135 0.91349976 4234 Q9BXV9 C14orf142 Uncharacterized protein C14orf142 yes yes 1 0 1 By MS/MS By MS/MS 5 3.56 1 1 1 2 1 92.336 89.687 2 1.8721E-45 111472 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 180.2 142.18 79607000 0 77084000 0 0 0 0 0 0 0 0 0 0 0 0 2523100 34742 4234 31550 291059;291060;291061 230519;230520;230521 230519 3 MELLGEYVGQEGKPQK Acetyl (Protein N-term);Oxidation (M) 1862.9084 0.90841439 4234 Q9BXV9 C14orf142 Uncharacterized protein C14orf142 yes yes 1 1 1 By MS/MS 3 0 1 1 80.893 77.593 2 2.4669E-06 92852 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 99.215 77.457 13096000 0 13096000 0 0 0 0 0 0 0 0 0 0 0 0 0 34743 4234 31550 291062 230522 230522 5710 1 MELLMNSVK Oxidation (M) 1079.5355 0.53550237 3390 Q8NBA8 DTWD2 DTW domain-containing protein 2 yes yes 0 1 0 By MS/MS 10 0 1 1 51.512 51.676 2 0.032178 58491 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 60.91 42.128 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34744 3390 31551 291063 230523 230523 1 MELPSGPGPER Acetyl (Protein N-term);Oxidation (M) 1226.5601 0.56013721 5268 Q9Y679 AUP1 Ancient ubiquitous protein 1 yes yes 1 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 48.677 48.878 2 0.0019884 55011 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 44.863 39.082 68708000 0 0 0 0 8879100 0 8390900 0 0 9666000 12173000 12410000 9759800 7429400 0 34745 5268 31552 291064;291065;291066;291067;291068;291069;291070 230524;230525;230526;230527;230528;230529 230528 6673 3 MELQEIQLK Unmodified 1130.6005 0.60054547 831 P06753 TPM3 Tropomyosin alpha-3 chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.66 6 1 15 2 3 2 1 1 1 1 1 1 1 2 1 1 2 2 70.981 69.421 2 0.0020722 80484 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 128.69 0 6984100000 179330000 5417100000 56421000 52147000 44149000 37280000 46281000 55058000 35055000 63515000 223650000 165440000 69390000 199470000 339820000 34746 831 31553 291071;291072;291073;291074;291075;291076;291077;291078;291079;291080;291081;291082;291083;291084;291085;291086;291087;291088;291089;291090;291091;291092 230530;230531;230532;230533;230534;230535;230536;230537;230538;230539;230540;230541;230542;230543;230544;230545;230546;230547;230548 230541 13 MELQEMQLK Unmodified 1148.557 0.55696609 90;853 CON__Q3SX28;P07951 TPM2 Tropomyosin beta chain no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.2 3.27 5 2 23 1 4 2 2 2 1 2 2 2 2 2 2 2 2 2 62.946 61.73 2 0.00095021 80728 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 157.86 0 + 3184100000 48710000 2617800000 13444000 11076000 20019000 5047200 19209000 27758000 14455000 14473000 74670000 69747000 25126000 52668000 169910000 34747 90;853 31554 291093;291094;291095;291096;291097;291098;291099;291100;291101;291102;291103;291104;291105;291106;291107;291108;291109;291110;291111;291112;291113;291114;291115;291116;291117;291118;291119;291120;291121;291122 230549;230550;230551;230552;230553;230554;230555;230556;230557;230558;230559;230560;230561;230562;230563;230564;230565;230566;230567;230568;230569;230570;230571;230572;230573;230574;230575;230576;230577;230578;230579;230580;230581;230582;230583 230556 34 MELQPPEASIAVVSIPR Acetyl (Protein N-term);Oxidation (M) 1893.987 0.98699906 860 P08195 SLC3A2 4F2 cell-surface antigen heavy chain yes yes 1 1 0 By MS/MS By MS/MS 10 0 2 1 1 90.993 91.12 3 0.00034848 105678 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 50.608 48.591 6677600 0 0 0 0 0 0 0 0 0 3476400 0 0 0 0 3201300 34748 860 31555 291123;291124 230584;230585 230584 1083 2 MELQQVEGLK Unmodified 1173.6064 0.60635913 3998 Q96T51 RUFY1 RUN and FYVE domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 61.121 61.185 2 0.0019564 69999 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 110.87 91.235 44116000 0 0 0 2616500 0 7303400 3894300 0 0 7463700 0 10424000 5538600 6875800 0 34749 3998 31556 291125;291126;291127;291128;291129;291130;291131;291132 230586;230587;230588;230589;230590;230591;230592;230593 230590 8 MELQTLQEALK Acetyl (Protein N-term);Oxidation (M) 1360.6908 0.69081704 3755 Q96BD5 PHF21A PHD finger protein 21A yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 88.342 88.429 2 5.665E-05 102799 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 85.533 73.578 30656000 0 0 0 0 3938400 3116500 3305900 5337100 3395900 6438200 0 0 5124200 0 0 34750 3755 31557 291133;291134;291135;291136;291137;291138;291139 230594;230595;230596;230597;230598;230599;230600;230601 230599 5324 8 MELQTLQEALK Acetyl (Protein N-term) 1344.6959 0.69590241 3755 Q96BD5 PHF21A PHD finger protein 21A yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 94.427 94.514 2 0.00019486 109618 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.111 72.24 14526000 0 0 0 0 1069000 797080 641000 0 0 1779000 1414000 1727200 0 2532100 4566800 34751 3755 31557 291140;291141;291142;291143;291144;291145;291146;291147 230602;230603;230604;230605 230602 4 MELSAEYLR Acetyl (Protein N-term);Oxidation (M) 1168.5434 0.54342452 4379 Q9H3K6 BOLA2 BolA-like protein 2 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.927 73.988 2 0.00042721 85222 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 90.657 67.917 154910000 0 0 0 5372500 6688200 15893000 7571100 4844100 5618600 10531000 21468000 23227000 7764200 13998000 31933000 34752 4379 31558 291148;291149;291150;291151;291152;291153;291154;291155;291156;291157;291158;291159 230606;230607;230608;230609;230610;230611;230612;230613;230614;230615;230616;230617;230618;230619 230613 5834 14 MELSAEYLR Acetyl (Protein N-term) 1152.5485 0.5485099 4379 Q9H3K6 BOLA2 BolA-like protein 2 yes yes 1 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 85.211 85.362 2 0.0017017 99144 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 78.334 51.951 85244000 0 0 0 0 0 0 0 4896000 0 8460400 12062000 10342000 0 10706000 38778000 34753 4379 31558 291160;291161;291162;291163;291164;291165 230620;230621;230622;230623 230623 4 MELSAEYLREK Acetyl (Protein N-term);Oxidation (M) 1425.681 0.68098063 4379 Q9H3K6 BOLA2 BolA-like protein 2 yes yes 1 1 1 By MS/MS By MS/MS By MS/MS 2.12 0.599 1 5 2 3 4 1 74.156 70.98 2 3.2919E-20 77860 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 185.08 135.64 361350000 62249000 261190000 37909000 0 0 0 0 0 0 0 0 0 0 0 0 34754 4379 31559 291166;291167;291168;291169;291170;291171;291172;291173 230624;230625;230626;230627;230628;230629;230630;230631;230632 230627 5834 9 MELSAEYLREK Acetyl (Protein N-term) 1409.6861 0.68606601 4379 Q9H3K6 BOLA2 BolA-like protein 2 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 81.826 77.161 2 3.0815E-23 96610 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 210.08 157.59 1119400000 82661000 1013900000 22863000 0 0 0 0 0 0 0 0 0 0 0 0 34755 4379 31559 291174;291175;291176;291177 230633;230634;230635;230636;230637;230638;230639;230640 230634 8 MELSDANLQTLTEYLK Acetyl (Protein N-term);Oxidation (M) 1925.9292 0.92920941 1754 P55060 CSE1L Exportin-2 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.33 4.14 2 1 1 5 2 2 1 1 1 1 1 99.307 99.658 2;3 3.5485E-242 113217 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 241.15 209.31 543230000 136070000 360230000 0 0 0 0 0 0 0 28043000 9373400 3889200 0 4225200 1395600 34756 1754 31560 291178;291179;291180;291181;291182;291183;291184;291185;291186 230641;230642;230643;230644;230645;230646;230647;230648;230649 230641 2862 8 MELSDANLQTLTEYLK Acetyl (Protein N-term) 1909.9343 0.93429479 1754 P55060 CSE1L Exportin-2 yes yes 1 0 0 By MS/MS By MS/MS 2 0.707 1 2 1 2 2 102 99.252 2 0 118507 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 293.82 277.68 807840000 126530000 681310000 0 0 0 0 0 0 0 0 0 0 0 0 0 34757 1754 31560 291187;291188;291189;291190 230650;230651;230652 230650 3 MELSESVQK Acetyl (Protein N-term) 1091.5169 0.51687542 4842 Q9UBI1 COMMD3 COMM domain-containing protein 3 yes yes 1 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 59.399 59.708 2 0.0029069 68140 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 67.993 52.842 20585000 0 0 0 0 0 0 2531700 0 2359100 3960000 0 4272300 0 0 7462000 34758 4842 31561 291191;291192;291193;291194;291195;291196 230653;230654;230655;230656 230653 4 MELSESVQK Acetyl (Protein N-term);Oxidation (M) 1107.5118 0.51179004 4842 Q9UBI1 COMMD3 COMM domain-containing protein 3 yes yes 1 1 0 By MS/MS 1 0 1 1 101.03 106.3 2 0.010585 85780 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 66.692 53.644 9283700 9283700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34759 4842 31561 291197 230657 230657 6210 1 MEMPLPPDDQELRNVIDK Acetyl (Protein N-term) 2181.0446 0.044590291 3249 Q8IWX8 CHERP Calcium homeostasis endoplasmic reticulum protein yes yes 1 0 1 By MS/MS 2 0 1 1 94.959 90.094 2 7.2222E-05 111649 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.85 95.942 18500000 0 18500000 0 0 0 0 0 0 0 0 0 0 0 0 0 34760 3249 31562 291198 230658 230658 1 MEMQLQAASLQK Oxidation (M) 1392.6741 0.67412112 5323 yes yes 0 1 0 By MS/MS 2 0 1 1 78.663 73.927 3 0.0092906 92103 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 46.706 6.1168 + 15196000 0 15196000 0 0 0 0 0 0 0 0 0 0 0 0 0 34761 5323 31563 291199 230659 230659 6719 1 MEMTEMTGVSLK Acetyl (Protein N-term) 1397.6241 0.62405938 3950 Q96PZ0 PUS7 Pseudouridylate synthase 7 homolog yes yes 1 0 0 By MS/MS By MS/MS 1.33 0.471 2 1 1 2 105.42 108.49 2 7.3457E-15 91117 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 138.22 114.43 21716000 13965000 7750700 0 0 0 0 0 0 0 0 0 0 0 0 0 34762 3950 31564 291200;291201;291202 230660;230661;230662 230661 3 MEMTEMTGVSLK Acetyl (Protein N-term);3 Oxidation (M) 1445.6088 0.60880325 3950 Q96PZ0 PUS7 Pseudouridylate synthase 7 homolog yes yes 1 3 0 By MS/MS 1 0 1 1 101.17 102.06 2 0.00018072 93065 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 84.658 77.379 2089100 0 2089100 0 0 0 0 0 0 0 0 0 0 0 0 0 34763 3950 31564 291203 230663;230664 230664 5436;5437;5438 2 MEMTEMTGVSLK Acetyl (Protein N-term);Oxidation (M) 1413.619 0.618974 3950 Q96PZ0 PUS7 Pseudouridylate synthase 7 homolog yes yes 1 1 0 By MS/MS 1 0 1 1 104.37 105.26 2 0.0060172 96907 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 57.348 45.501 8451900 0 8451900 0 0 0 0 0 0 0 0 0 0 0 0 0 34764 3950 31564 291204 230665 230665 5436;5437;5438 1 MENANIPSVSLSK Unmodified 1388.697 0.69696505 1316 P32019 INPP5B Type II inositol 1,4,5-trisphosphate 5-phosphatase yes yes 0 0 0 By MS/MS 2 0 1 1 66.853 60.937 2 0.024017 77859 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.49 31.017 33266000 0 33266000 0 0 0 0 0 0 0 0 0 0 0 0 0 34765 1316 31565 291205 230666 230666 1 MENEEQPQDERKPEVTCTLEDK Unmodified 2704.1956 0.19562422 3811 Q96EI5 TCEAL4 Transcription elongation factor A protein-like 4 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 39.016 39.267 4 5.8493E-10 42561 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.369 26.848 106190000 0 0 0 7476400 0 4574200 5330000 8635700 0 7761100 13213000 18795000 8395900 8899500 23104000 34766 3811 31566 291206;291207;291208;291209;291210;291211;291212;291213;291214;291215 230667;230668;230669;230670;230671;230672;230673;230674 230669 7 MENEEQPQDERKPEVTCTLEDK Oxidation (M) 2720.1905 0.19053884 3811 Q96EI5 TCEAL4 Transcription elongation factor A protein-like 4 yes yes 0 1 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 8.86 2.8 1 6 1 1 1 1 1 1 1 37.297 36.555 4 1.0694E-06 49395 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.369 61.911 58977000 11899000 0 0 5893300 0 0 0 0 0 6481400 6323200 15832000 5895600 6652800 0 34767 3811 31566 291216;291217;291218;291219;291220;291221;291222 230675;230676 230675 5335 2 MENGVLGNALEGVHVEEEEGEK Oxidation (M) 2384.0802 0.080183754 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 76.276 74.586 3 1.7161E-07 86505 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 56.247 53.103 64264000 10075000 0 4279500 0 0 6149700 0 0 0 8191900 7386300 0 0 0 28182000 34768 1564 31567 291223;291224;291225;291226;291227;291228 230677;230678;230679;230680 230677 2487 4 MENGVLGNALEGVHVEEEEGEK Unmodified 2368.0853 0.085269132 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 79.85 75.928 3 2.1858E-16 88665 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.593 78.931 31509000 14017000 0 0 0 0 0 0 0 0 0 0 0 0 0 17492000 34769 1564 31567 291229;291230 230681;230682 230681 2 MENGYTYEDYK Acetyl (Protein N-term);Oxidation (M) 1469.5657 0.5656761 728 P00491 PNP Purine nucleoside phosphorylase yes yes 1 1 0 By MS/MS 1 0 1 1 99.058 104.32 2 0.00016427 83721 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 102.06 98.139 44440000 44440000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34770 728 31568 291231 230683;230684 230684 878 2 MENGYTYEDYK Acetyl (Protein N-term) 1453.5708 0.57076148 728 P00491 PNP Purine nucleoside phosphorylase yes yes 1 0 0 By MS/MS 1 0 1 1 102.67 107.94 2 0.00020181 87851 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 94.297 89.391 6931700 6931700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34771 728 31568 291232 230685 230685 1 MENLPEINTAK Unmodified 1258.6227 0.62273747 2529 Q15398 DLGAP5 Disks large-associated protein 5 yes yes 0 0 0 By MS/MS 2 0 1 1 59.905 54.047 2 0.004644 69433 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.693 59.931 25432000 0 25432000 0 0 0 0 0 0 0 0 0 0 0 0 0 34772 2529 31569 291233 230686 230686 1 MENLVAYAK Oxidation (M) 1053.5165 0.51648149 3662 Q92793 CREBBP CREB-binding protein yes yes 0 1 0 By matching By MS/MS By MS/MS By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 42.975 43.039 2 0.0047187 47750 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 73.157 47.42 33603000 0 0 0 0 5868200 0 7569300 7203700 4480700 0 8481500 0 0 0 0 34773 3662 31570 291234;291235;291236;291237;291238;291239 230687;230688;230689 230689 5184 2 MENLVAYAK Unmodified 1037.5216 0.52156686 3662 Q92793 CREBBP CREB-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 6 1 1 1 1 1 1 53.46 53.848 2 0.0071283 60646 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 73.248 45.142 26823000 0 0 0 0 0 0 10324000 12644000 0 0 0 1675700 0 0 2178600 34774 3662 31570 291240;291241;291242;291243;291244;291245 230690;230691;230692;230693 230690 4 MENLVAYAR Oxidation (M) 1081.5226 0.5226295 2171 Q09472 EP300 Histone acetyltransferase p300 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 45.643 45.806 2 0.0034219 51439 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 80.684 60.202 84431000 0 0 0 6503400 8462400 6665500 6641900 6138700 6405700 8460900 9597200 9471100 6695100 0 9389000 34775 2171 31571 291246;291247;291248;291249;291250;291251;291252;291253;291254;291255;291256 230694;230695;230696;230697;230698;230699;230700;230701;230702;230703 230697 3495 10 MENLVAYAR Unmodified 1065.5277 0.52771487 2171 Q09472 EP300 Histone acetyltransferase p300 yes yes 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 55.056 55.612 2 0.019448 63013 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 53.968 19.144 17602000 0 0 0 0 0 0 0 0 0 0 5771700 5651100 0 0 6179000 34776 2171 31571 291257;291258;291259 230704 230704 1 MENMAEEELLPLEK Acetyl (Protein N-term) 1716.795 0.79502411 3072 Q7Z2T5 TRMT1L TRMT1-like protein yes yes 1 0 0 By MS/MS 1 0 1 1 105.75 111.02 2 0.00021694 91605 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 97.911 80.886 6208600 6208600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34777 3072 31572 291260 230705 230705 1 MENNLAEFER Unmodified 1251.5554 0.55538619 4135 Q9BT25 HAUS8 HAUS augmin-like complex subunit 8 yes yes 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching 10 0 8 1 1 1 1 1 1 1 1 55.518 55.72 2 0.0074378 63213 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 72.928 63.714 21556000 0 0 0 1489700 0 1716200 0 0 1628800 3388600 3451800 4264400 2084200 0 3532500 34778 4135 31573 291261;291262;291263;291264;291265;291266;291267;291268 230706;230707 230706 1 MENNLAEFER Oxidation (M) 1267.5503 0.55030081 4135 Q9BT25 HAUS8 HAUS augmin-like complex subunit 8 yes yes 0 1 0 By matching By MS/MS By matching 10 0 3 1 1 1 48.405 48.358 2 0.017117 54483 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 44.425 35.562 11195000 0 0 0 0 2040600 0 3697500 0 0 0 0 0 5457200 0 0 34779 4135 31573 291269;291270;291271 230708 230708 5617 1 MENQSENNDIDEVIIPTAPLYK Oxidation (M) 2548.2003 0.20029889 4063 Q99816 TSG101 Tumor susceptibility gene 101 protein yes yes 0 1 0 By MS/MS By matching By MS/MS 6.25 3.77 1 1 2 2 1 1 87.339 85.4 2;3 4.3048E-11 105741 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.41 74.617 57061000 0 52781000 0 0 0 0 0 1510000 0 0 0 2770500 0 0 0 34780 4063 31574 291272;291273;291274;291275 230709;230710;230711;230712 230710 5562 4 MENQSENNDIDEVIIPTAPLYK Unmodified 2532.2054 0.20538427 4063 Q99816 TSG101 Tumor susceptibility gene 101 protein yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 7 3.69 1 1 3 2 1 1 1 87.787 86.257 3 0.0021876 106627 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 40.285 28.162 119330000 0 104530000 0 0 0 0 0 3294500 0 3119400 0 0 0 0 8392300 34781 4063 31574 291276;291277;291278;291279;291280 230713;230714;230715 230713 3 MENSQLCK Acetyl (Protein N-term);Oxidation (M) 1066.4423 0.44233027 2243 Q13151 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 yes yes 1 1 0 By MS/MS 1 0 1 1 76.135 81.399 2 0.03248 56990 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 54.549 40.878 2421500 2421500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34782 2243 31575 291281 230716 230716 1 MEPAAGSSMEPSADWLATAAAR Acetyl (Protein N-term);2 Oxidation (M) 2292.9991 0.99909666 1467 P42771 CDKN2A Cyclin-dependent kinase inhibitor 2A yes yes 1 2 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 83.592 83.639 3 2.4562E-07 96920 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 53.779 49.975 26990000 0 0 0 1290300 0 0 0 4289000 0 0 11652000 0 0 0 9757900 34783 1467 31576 291282;291283;291284;291285 230717;230718 230718 2303;2304 2 MEPAAGSSMEPSADWLATAAAR Acetyl (Protein N-term);Oxidation (M) 2277.0042 0.0041820395 1467 P42771 CDKN2A Cyclin-dependent kinase inhibitor 2A yes yes 1 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 88.02 88.173 3 1.2082E-08 101878 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.703 60.803 10521000 0 0 0 0 0 0 0 0 0 0 1591700 0 0 1289500 7639600 34784 1467 31576 291286;291287;291288 230719 230719 2303;2304 1 MEPAAGSSMEPSADWLATAAAR Acetyl (Protein N-term) 2261.0093 0.0092674174 1467 P42771 CDKN2A Cyclin-dependent kinase inhibitor 2A yes yes 1 0 0 By MS/MS 10 0 1 1 92.179 92.317 2 0.0020934 107042 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.813 39.641 1617700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1617700 34785 1467 31576 291289 230720 230720 1 MEPADYNSQIIGHSI Unmodified 1673.7719 0.7719209 976 P13056 NR2C1 Nuclear receptor subfamily 2 group C member 1 yes yes 0 0 0 By MS/MS 2 0 1 1 78.26 73.485 2 2.0816E-06 91645 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.89 106.57 42508000 0 42508000 0 0 0 0 0 0 0 0 0 0 0 0 0 34786 976 31577 291290 230721 230721 1 MEPAEQPSELVSAEGR Acetyl (Protein N-term);Oxidation (M) 1786.8043 0.80434324 1521 P47224 RABIF Guanine nucleotide exchange factor MSS4 yes yes 1 1 0 By MS/MS 1 0 1 1 101.38 106.64 2 0.0070568 86274 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 42.031 35.498 2717100 2717100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34787 1521 31578 291291 230722 230722 2414 1 MEPAEQPSELVSAEGRNRK Acetyl (Protein N-term) 2169.0484 0.048430116 1521 P47224 RABIF Guanine nucleotide exchange factor MSS4 yes yes 1 0 2 By MS/MS 2 0 1 1 64.83 61.074 3 0.00015927 75912 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 55.589 47.692 14837000 0 0 14837000 0 0 0 0 0 0 0 0 0 0 0 0 34788 1521 31579 291292 230723;230724 230724 2 MEPAVGGPGPLIVNNK Acetyl (Protein N-term) 1633.8498 0.84977729 2806 Q5VSL9 STRIP1 Striatin-interacting protein 1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 83.545 83.517 2 0.010768 96379 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.015 34.044 20186000 0 0 0 1102700 1000700 2280000 0 0 0 0 0 5003600 0 4549000 6249600 34789 2806 31580 291293;291294;291295;291296;291297;291298 230725 230725 1 MEPAVGGPGPLIVNNK Acetyl (Protein N-term);Oxidation (M) 1649.8447 0.84469192 2806 Q5VSL9 STRIP1 Striatin-interacting protein 1 yes yes 1 1 0 By MS/MS 1 0 1 1 103.71 104.6 2 2.3076E-16 96140 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 115.57 102.62 6380700 0 6380700 0 0 0 0 0 0 0 0 0 0 0 0 0 34790 2806 31580 291299 230726 230726 4440 1 MEPAVSEPMRDQVAR Acetyl (Protein N-term) 1756.8236 0.8236389 2569 Q15738 NSDHL Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.414 63.507 2 1.4993E-20 72504 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 115.18 90.793 183200000 0 0 0 11832000 10449000 13542000 10011000 16564000 7848400 17696000 21320000 19051000 15443000 16233000 23210000 34791 2569 31581 291300;291301;291302;291303;291304;291305;291306;291307;291308;291309;291310;291311 230727;230728;230729;230730;230731;230732;230733;230734;230735;230736;230737;230738 230733 12 MEPAVSEPMRDQVAR Acetyl (Protein N-term);Oxidation (M) 1772.8186 0.81855352 2569 Q15738 NSDHL Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating yes yes 1 1 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 51.495 51.435 2 0.00015559 58027 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 67.214 58.26 127440000 0 0 0 13562000 16776000 14834000 18141000 19934000 0 23213000 0 0 20984000 0 0 34792 2569 31581 291312;291313;291314;291315;291316;291317;291318 230739;230740;230741 230741 4221;4222 3 MEPAVSEPMRDQVAR Acetyl (Protein N-term);2 Oxidation (M) 1788.8135 0.81346814 2569 Q15738 NSDHL Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating yes yes 1 2 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.771 39.95 2 0.019067 44011 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 41.704 27.285 162090000 0 0 0 10350000 11451000 10471000 12372000 9257400 10180000 18754000 17441000 27032000 15213000 7329700 12235000 34793 2569 31581 291319;291320;291321;291322;291323;291324;291325;291326;291327;291328;291329;291330 230742 230742 4221;4222 1 MEPDGTYEPGFVGIR Acetyl (Protein N-term);Oxidation (M) 1724.7716 0.77158655 1384 P36954 POLR2I DNA-directed RNA polymerase II subunit RPB9 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 80.621 80.737 2 0.00016302 93514 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 58.172 48.168 10730000 0 0 0 0 0 0 0 0 0 0 0 5492100 2141800 3096300 0 34794 1384 31582 291331;291332;291333 230743;230744;230745 230745 2150 3 MEPEDIPTDELK Unmodified 1415.649 0.6490118 5107 Q9Y2K1 ZBTB1 Zinc finger and BTB domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 63.199 63.566 2 0.003422 71978 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.434 50.202 10607000 0 0 0 0 0 0 0 0 2118200 0 0 0 0 0 8488900 34795 5107 31583 291334;291335;291336;291337;291338;291339;291340 230746;230747;230748;230749;230750;230751;230752 230748 7 MEPEQMLEGQTQVAENPHSEYGLTDNVER Acetyl (Protein N-term);2 Oxidation (M) 3404.4773 0.47727839 4279 Q9C005 DPY30 Protein dpy-30 homolog yes yes 1 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 73.396 73.451 3 1.4123E-147 84700 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 173.53 171.74 333190000 0 0 0 10355000 35352000 23002000 16554000 0 20561000 37509000 36893000 59309000 30253000 20688000 42714000 34796 4279 31584 291341;291342;291343;291344;291345;291346;291347;291348;291349;291350;291351 230753;230754;230755;230756;230757;230758;230759;230760;230761;230762;230763;230764;230765;230766 230764 5737;5738 14 MEPEQMLEGQTQVAENPHSEYGLTDNVER Acetyl (Protein N-term);Oxidation (M) 3388.4824 0.48236376 4279 Q9C005 DPY30 Protein dpy-30 homolog yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 79.694 79.805 3 1.2088E-61 92001 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 108.75 108.11 84878000 0 0 0 0 5278700 0 0 6434300 4337400 10525000 11531000 13467000 0 6465900 26838000 34797 4279 31584 291352;291353;291354;291355;291356;291357;291358;291359 230767;230768;230769;230770;230771;230772;230773;230774;230775;230776 230769 5737;5738 10 MEPEQMLEGQTQVAENPHSEYGLTDNVER Acetyl (Protein N-term) 3372.4874 0.48744914 4279 Q9C005 DPY30 Protein dpy-30 homolog yes yes 1 0 0 By MS/MS 10 0 1 1 84.229 84.408 3 2.4654E-37 97399 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.595 86.18 14526000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14526000 34798 4279 31584 291360 230777 230777 1 MEPEQMLEGQTQVAENPHSEYGLTDNVERIVENEK Acetyl (Protein N-term) 4084.863 0.8630037 4279 Q9C005 DPY30 Protein dpy-30 homolog yes yes 1 0 1 By MS/MS 2 0 1 1 93.942 85.812 3 4.868E-11 111071 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.583 49.11 12291000 12291000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34799 4279 31585 291361 230778 230778 1 MEPEQMLEGQTQVAENPHSEYGLTDNVERIVENEK Acetyl (Protein N-term);2 Oxidation (M) 4116.8528 0.85283294 4279 Q9C005 DPY30 Protein dpy-30 homolog yes yes 1 2 1 By MS/MS 2 0 1 1 84.799 82.367 4 6.5384E-17 99855 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 55.895 54.312 10882000 0 0 10882000 0 0 0 0 0 0 0 0 0 0 0 0 34800 4279 31585 291362 230779 230779 5737;5738 1 MEPEQMLEGQTQVAENPHSEYGLTDNVERIVENEK Acetyl (Protein N-term);Oxidation (M) 4100.8579 0.85791832 4279 Q9C005 DPY30 Protein dpy-30 homolog yes yes 1 1 1 By MS/MS 2 0 1 1 88.579 86.134 4 2.8792E-07 104349 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 43.728 42.273 8492700 0 0 8492700 0 0 0 0 0 0 0 0 0 0 0 0 34801 4279 31585 291363 230780 230780 5737;5738 1 MEPGPDGPAASGPAAIR Acetyl (Protein N-term);Oxidation (M) 1650.7672 0.76716988 1093 P19623 SRM Spermidine synthase yes yes 1 1 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 57.173 57.527 2 2.3882E-19 64692 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 101.39 94.502 34086000 0 0 0 0 0 4266100 0 0 0 0 9774000 0 0 0 20045000 34802 1093 31586 291364;291365;291366 230781;230782 230781 1568 2 MEPGPDGPAASGPAAIR Acetyl (Protein N-term) 1634.7723 0.77225526 1093 P19623 SRM Spermidine synthase yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 69.228 69.603 2 0.00018631 79900 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 56.951 42.261 24526000 0 0 0 0 0 0 0 0 0 0 5590500 6122900 0 0 12813000 34803 1093 31586 291367;291368;291369;291370 230783;230784;230785;230786 230786 4 MEPGRGGTETVGK Acetyl (Protein N-term) 1359.6453 0.64526383 489 O75385 ULK1 Serine/threonine-protein kinase ULK1 yes yes 1 0 1 By MS/MS 2 0 1 1 33.618 28.975 2 0.004458 38053 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.466 35.212 8143900 0 8143900 0 0 0 0 0 0 0 0 0 0 0 0 0 34804 489 31587 291371 230787 230787 1 MEPLATVESLEQYLLK Oxidation (M) 1878.9649 0.96486663 5004 Q9ULT8 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 0 1 0 By MS/MS 2 0 1 1 101.29 96.576 3 0.00022765 119348 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.283 62.461 5918000 0 5918000 0 0 0 0 0 0 0 0 0 0 0 0 0 34805 5004 31588 291372 230788 230788 6349 1 MEPLATVESLEQYLLK Unmodified 1862.97 0.96995201 5004 Q9ULT8 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 102.03 97.929 3 0.00025556 121208 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.632 71.435 11912000 0 11912000 0 0 0 0 0 0 0 0 0 0 0 0 0 34806 5004 31588 291373;291374 230789 230789 1 MEPLNNLQVAVK Oxidation (M) 1370.7228 0.72278587 2178;1937 P63010;Q10567 AP2B1;AP1B1 AP-2 complex subunit beta;AP-1 complex subunit beta-1 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 64.94 63.923 2 1.8826E-05 72350 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 98.582 86.375 659050000 5558600 467670000 0 8655200 9057700 18262000 16138000 0 10626000 18043000 19169000 21302000 16758000 18627000 29176000 34807 1937;2178 31589 291375;291376;291377;291378;291379;291380;291381;291382;291383;291384;291385;291386;291387 230790;230791;230792;230793;230794;230795;230796;230797;230798;230799;230800;230801;230802 230797 3115 13 MEPLNNLQVAVK Unmodified 1354.7279 0.72787125 2178;1937 P63010;Q10567 AP2B1;AP1B1 AP-2 complex subunit beta;AP-1 complex subunit beta-1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 74.218 73.637 2 0.00027083 84875 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 96.668 76.881 1257600000 0 1032600000 3290200 9934400 11740000 26098000 9671900 0 12765000 20697000 24320000 25012000 0 23845000 57561000 34808 1937;2178 31589 291388;291389;291390;291391;291392;291393;291394;291395;291396;291397;291398;291399 230803;230804;230805;230806;230807;230808;230809;230810;230811;230812;230813;230814;230815;230816;230817 230811 15 MEPLQVVK Unmodified 942.52084 0.52083858 3451 Q8NFZ0 FBXO18 F-box only protein 18 yes yes 0 0 0 By MS/MS 2 0 1 1 59.368 53.525 2 0.045356 68839 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.422 49.062 19786000 0 19786000 0 0 0 0 0 0 0 0 0 0 0 0 0 34809 3451 31590 291400 230818 230818 1 MEPLQVVK Oxidation (M) 958.51575 0.5157532 3451 Q8NFZ0 FBXO18 F-box only protein 18 yes yes 0 1 0 By MS/MS 1 0 1 1 106.62 107.52 2 0.026308 99511 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 76.035 55.336 68048000 0 68048000 0 0 0 0 0 0 0 0 0 0 0 0 0 34810 3451 31590 291401 230819 230819 1 MEPNDSTSTAVEEPDSLEVLVK Acetyl (Protein N-term);Oxidation (M) 2447.1261 0.12613089 1502 P46379 BAG6 Large proline-rich protein BAG6 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching 9.47 2.12 1 16 1 2 2 1 2 1 1 2 2 2 1 87.437 87.77 2;3 3.1614E-14 100446 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.733 76.733 260600000 34286000 0 0 9773900 27317000 7165300 0 30565000 0 11507000 9026300 58867000 30061000 31850000 10180000 34811 1502 31591 291402;291403;291404;291405;291406;291407;291408;291409;291410;291411;291412;291413;291414;291415;291416;291417;291418 230820;230821;230822;230823;230824;230825;230826 230824 2372 7 MEPPNLYPVK Acetyl (Protein N-term);Oxidation (M) 1244.6111 0.61111015 2886 Q6ICB0 DESI1 Desumoylating isopeptidase 1 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.18 2.59 1 10 1 1 1 1 1 1 1 1 1 1 1 72.479 73.011 2 0.00018997 79632 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 91.069 76.395 160390000 10934000 0 0 8518300 11014000 9861400 14720000 15670000 0 16473000 17585000 20933000 0 15042000 19642000 34812 2886 31592 291419;291420;291421;291422;291423;291424;291425;291426;291427;291428;291429 230827;230828;230829;230830;230831;230832;230833;230834;230835;230836 230832 4522 10 MEPPNLYPVK Acetyl (Protein N-term) 1228.6162 0.61619553 2886 Q6ICB0 DESI1 Desumoylating isopeptidase 1 yes yes 1 0 0 By MS/MS 1 0 1 1 104.99 110.25 2 0.0147 90657 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 48.796 36.749 16188000 16188000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34813 2886 31592 291430 230837 230837 1 MEPSSLELPADTVQR Acetyl (Protein N-term);Oxidation (M) 1729.8193 0.81926503 2629 Q16719 KYNU Kynureninase yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.83 1 8 1 1 1 1 1 1 1 1 1 79.361 80.076 2 6.7256E-09 87924 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.093 78.517 128030000 7079300 0 0 0 0 3345100 0 0 3068500 4130300 25722000 20212000 3758400 17067000 43648000 34814 2629 31593 291431;291432;291433;291434;291435;291436;291437;291438;291439 230838;230839;230840;230841;230842;230843;230844 230838 4284 7 MEPSSLELPADTVQR Acetyl (Protein N-term) 1713.8244 0.82435041 2629 Q16719 KYNU Kynureninase yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.35 1 5 1 1 1 1 1 1 87.126 88.123 2 3.8617E-05 96144 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 91.961 82.529 121680000 14356000 0 0 0 0 0 0 0 0 0 25143000 9251300 2381300 13759000 56794000 34815 2629 31593 291440;291441;291442;291443;291444;291445 230845;230846;230847;230848;230849 230848 5 MEPSSLELPADTVQRIAAELK Acetyl (Protein N-term);Oxidation (M) 2355.1992 0.19917668 2629 Q16719 KYNU Kynureninase yes yes 1 1 1 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 1 3 2 98.628 95.092 2;3 0 117157 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 266.71 248.29 893780000 1316500 867860000 24605000 0 0 0 0 0 0 0 0 0 0 0 0 34816 2629 31594 291446;291447;291448;291449;291450;291451 230850;230851;230852;230853;230854;230855;230856 230850 4284 6 MEPSSLELPADTVQRIAAELK Acetyl (Protein N-term) 2339.2043 0.20426206 2629 Q16719 KYNU Kynureninase yes yes 1 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 100.25 94.837 3 0.0001282 115334 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 64.265 57.072 640490000 31051000 609430000 0 0 0 0 0 0 0 0 0 0 0 0 0 34817 2629 31594 291452;291453;291454 230857;230858;230859 230858 3 MEPSSWSGSESPAENMER Acetyl (Protein N-term);Oxidation (M) 2067.815 0.81498429 1235 P28347 TEAD1 Transcriptional enhancer factor TEF-1 yes yes 1 1 0 By MS/MS 10 0 1 1 63.716 63.896 2 0.02916 73144 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 40.113 40.113 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34818 1235 31595 291455 230860 230860 1 MEPTAPSLTEEDLTEVK Acetyl (Protein N-term);Oxidation (M) 1946.9031 0.90305424 710 O95999 BCL10 B-cell lymphoma/leukemia 10 yes yes 1 1 0 By MS/MS By MS/MS By matching By MS/MS 7.75 3.9 1 3 1 1 1 1 85.695 85.897 2;3 3.6868E-07 94951 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 93.754 78.362 20648000 0 8651000 0 2207400 0 0 0 2978400 0 0 0 6811200 0 0 0 34819 710 31596 291456;291457;291458;291459 230861;230862 230861 854 2 MEPTAPSLTEEDLTEVKK Acetyl (Protein N-term) 2059.0031 0.003102632 710 O95999 BCL10 B-cell lymphoma/leukemia 10 yes yes 1 0 1 By MS/MS 2 0 1 1 81.403 76.698 2 1.0811E-07 95425 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.97 108.4 23773000 0 23773000 0 0 0 0 0 0 0 0 0 0 0 0 0 34820 710 31597 291460 230863 230863 1 MEQEPQNGEPAEIK Acetyl (Protein N-term);Oxidation (M) 1656.7301 0.73011567 3301 Q8N0X7 SPG20 Spartin yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.108 40.288 2 3.8768E-17 44756 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 119.39 106.43 272930000 0 0 0 19806000 17046000 18908000 24244000 19879000 17877000 22712000 27201000 32058000 31527000 23930000 17740000 34821 3301 31598 291461;291462;291463;291464;291465;291466;291467;291468;291469;291470;291471;291472 230864;230865;230866;230867;230868;230869;230870;230871;230872;230873;230874;230875 230865 4898 12 MEQEPQNGEPAEIK Acetyl (Protein N-term) 1640.7352 0.73520105 3301 Q8N0X7 SPG20 Spartin yes yes 1 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 52.232 52.436 2 0.00012258 59346 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 73.781 66.136 288970000 0 0 0 11163000 0 20263000 11244000 23900000 11847000 28577000 34784000 46429000 33847000 25905000 41009000 34822 3301 31598 291473;291474;291475;291476;291477;291478;291479;291480;291481;291482;291483 230876;230877;230878;230879;230880;230881;230882;230883;230884;230885 230881 10 MEQERQEQEER Unmodified 1490.642 0.64196936 2621 Q16643 DBN1 Drebrin yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 6.2111 6.3349 3 0.0031245 4074 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 51.092 37.429 20675000 0 0 0 1147200 1550200 1564100 0 0 806590 1917200 2362900 3592300 2553400 1546200 3634700 34823 2621 31599 291484;291485;291486;291487;291488;291489;291490;291491;291492;291493 230886;230887;230888 230886 3 MEQERQEQEERER Unmodified 1775.7857 0.78567349 2621 Q16643 DBN1 Drebrin yes yes 0 0 2 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 2 2 1 1 1 2 1 2 2 1 2 6.36 6.4827 3;4 0.0018839 3846 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.047 69.629 136360000 0 0 0 2743100 8627800 9734300 7992900 2884200 4331900 10779000 11405000 22606000 17440000 6691400 31128000 34824 2621 31600 291494;291495;291496;291497;291498;291499;291500;291501;291502;291503;291504;291505;291506;291507;291508;291509;291510;291511 230889;230890;230891;230892;230893 230890 5 MEQPPAPK Acetyl (Protein N-term);Oxidation (M) 954.44807 0.44806757 2250 Q13188 STK3 Serine/threonine-protein kinase 3;Serine/threonine-protein kinase 3 36kDa subunit;Serine/threonine-protein kinase 3 20kDa subunit yes yes 1 1 0 By MS/MS 1 0 1 1 76.524 81.788 2 0.016452 58125 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 57.559 38.828 2834100 2834100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34825 2250 31601 291512 230894 230894 3654 0 MEQQQLEEQK Unmodified 1289.5922 0.59216562 4617 Q9NRZ9 HELLS Lymphoid-specific helicase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.292 19.488 2 7.0304E-84 19872 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 207.29 159 95629000 0 0 0 4714000 5729800 6163300 6105900 6168700 4709900 12752000 8263200 11481000 7950900 7006000 14584000 34826 4617 31602 291513;291514;291515;291516;291517;291518;291519;291520;291521;291522;291523;291524 230895;230896;230897;230898;230899;230900;230901;230902;230903;230904;230905;230906 230903 7 MEQQQLEEQK Oxidation (M) 1305.5871 0.58708025 4617 Q9NRZ9 HELLS Lymphoid-specific helicase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.547 12.701 2 0.0012222 11451 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 88.136 72.255 31413000 0 0 0 2210500 2392700 2948500 2512600 2265100 2606400 3083800 3158700 3358400 3134200 1690700 2051600 34827 4617 31602 291525;291526;291527;291528;291529;291530;291531;291532;291533;291534;291535;291536 230907;230908;230909;230910;230911;230912 230912 6018 5 MEQVEILRK Acetyl (Protein N-term) 1186.638 0.63799361 2113 Q05209 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 yes yes 1 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 70.951 71.149 2 0.0036046 80977 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.37 55.477 64276000 0 0 0 0 0 6357200 0 3875300 4046100 8186000 6746500 8090900 6361200 6692800 13920000 34828 2113 31603 291537;291538;291539;291540;291541;291542;291543;291544;291545 230913;230914;230915;230916;230917;230918;230919;230920 230915 8 MEQVEILRK Acetyl (Protein N-term);Oxidation (M) 1202.6329 0.63290823 2113 Q05209 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 yes yes 1 1 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 9.3 2.1 1 9 1 1 1 1 1 1 1 1 1 1 52.219 52.009 2 0.0038299 59141 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 93.178 50.579 96203000 0 11885000 0 0 0 10834000 7625400 5899400 0 10050000 9845900 11729000 9148900 7367700 11816000 34829 2113 31603 291546;291547;291548;291549;291550;291551;291552;291553;291554;291555 230921;230922;230923;230924;230925;230926;230927 230922 3416 5 MEQVNELK Acetyl (Protein N-term);Oxidation (M) 1047.4907 0.49066067 1313 P31948 STIP1 Stress-induced-phosphoprotein 1 yes yes 1 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 4.5 3.91 1 3 2 2 1 1 1 1 49.773 50.933 2 0.0016891 43841 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.665 30.795 236760000 167810000 2710400 1591900 0 0 0 0 0 0 0 0 22225000 0 0 42425000 34830 1313 31604 291556;291557;291558;291559;291560;291561 230928;230929;230930;230931 230931 1962 2 MEQVNELK Acetyl (Protein N-term) 1031.4957 0.49574604 1313 P31948 STIP1 Stress-induced-phosphoprotein 1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.1 2.7 1 9 1 1 1 1 1 1 1 1 1 1 65.175 65.742 2 0.0016676 68326 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 107.9 53.69 272770000 121220000 0 0 3253000 2988700 2426100 5128600 2830000 0 6307600 27979000 0 0 27150000 73488000 34831 1313 31604 291562;291563;291564;291565;291566;291567;291568;291569;291570;291571 230932;230933;230934;230935;230936;230937;230938;230939;230940;230941 230939 10 MERAESSSTEPAK Acetyl (Protein N-term) 1463.6562 0.65622244 1739 P54278 PMS2 Mismatch repair endonuclease PMS2 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 25.409 24.587 2 0.0054295 25404 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.35 35.144 88065000 0 59008000 0 0 2238700 0 3499200 4844100 2482200 2836000 0 0 0 3186600 9969600 34832 1739 31605 291572;291573;291574;291575;291576;291577;291578;291579;291580;291581 230942;230943;230944;230945;230946 230943 5 MERAESSSTEPAK Acetyl (Protein N-term);Oxidation (M) 1479.6511 0.65113707 1739 P54278 PMS2 Mismatch repair endonuclease PMS2 yes yes 1 1 1 By MS/MS 2 0 1 1 13.664 10.35 2 0.014567 13982 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 42.336 26.198 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34833 1739 31605 291582 230947 230947 2816 1 MERASLIQK Acetyl (Protein N-term) 1116.5961 0.59612879 1312 P31947 SFN 14-3-3 protein sigma yes yes 1 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 54.601 48.899 2 0.0088082 60681 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 81.296 36.215 1002800000 207680000 665630000 129490000 0 0 0 0 0 0 0 0 0 0 0 0 34834 1312 31606 291583;291584;291585;291586 230948;230949;230950 230949 2 MERASLIQK Acetyl (Protein N-term);Oxidation (M) 1132.591 0.59104341 1312 P31947 SFN 14-3-3 protein sigma yes yes 1 1 1 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 36.336 32.344 2 0.011092 40219 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 64.265 17.183 120450000 0 31261000 89184000 0 0 0 0 0 0 0 0 0 0 0 0 34835 1312 31606 291587;291588 230951;230952 230951 1948 1 MEREPGAAGVR Acetyl (Protein N-term) 1213.5874 0.58735502 4188 Q9BVI4 NOC4L Nucleolar complex protein 4 homolog yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 33.444 33.675 2 0.027267 37087 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 50.108 28.66 42300000 0 0 0 0 3361400 4112500 2464000 2553300 2718800 5375300 5452700 6302500 4770900 0 5188400 34836 4188 31607 291589;291590;291591;291592;291593;291594;291595;291596;291597;291598 230953 230953 1 MERETNGNEDEEGRQK Oxidation (M) 1936.8181 0.81809583 4168 Q9BUQ8 DDX23 Probable ATP-dependent RNA helicase DDX23 yes yes 0 1 2 By matching By matching By MS/MS By matching By matching By matching By matching 10 0 7 1 1 1 1 1 1 1 5.5442 5.6667 3 0.0085647 3357 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 43.297 42.229 26180000 0 0 0 4015000 2691300 0 0 0 0 3616500 2757900 6039300 0 2497900 4561900 34837 4168 31608 291599;291600;291601;291602;291603;291604;291605 230954 230954 5661 1 MERETNGNEDEEGRQK Unmodified 1920.8232 0.82318121 4168 Q9BUQ8 DDX23 Probable ATP-dependent RNA helicase DDX23 yes yes 0 0 2 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 1 2 2 2 2 2 2 2 5.833 5.9486 3;4 4.2319E-27 3971 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 136.81 129.92 142270000 0 0 0 10216000 4184000 7125000 8002900 5585100 7083000 15593000 12657000 18627000 11517000 17532000 24148000 34838 4168 31608 291606;291607;291608;291609;291610;291611;291612;291613;291614;291615;291616;291617;291618;291619;291620;291621;291622;291623;291624;291625;291626;291627;291628 230955;230956;230957;230958;230959;230960;230961;230962 230962 7 MESADQAVAELNGTQVESVQLK Oxidation (M) 2362.1322 0.13221932 1075 P18615 NELFE Negative elongation factor E yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 8.83 2.61 1 5 1 1 1 1 1 1 76.924 76.509 3 1.5416E-07 88531 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 56.48 48.292 34191000 0 4754500 0 0 0 0 0 3504900 4098400 7583400 8510600 0 0 0 5739000 34839 1075 31609 291629;291630;291631;291632;291633;291634 230963;230964;230965 230963 1545 3 MESADQAVAELNGTQVESVQLK Unmodified 2346.1373 0.1373047 1075 P18615 NELFE Negative elongation factor E yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 81.524 77.522 3 2.0182E-74 96229 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 141.83 132.31 58348000 0 58348000 0 0 0 0 0 0 0 0 0 0 0 0 0 34840 1075 31609 291635;291636 230966;230967;230968 230967 3 MESAGLEQLLR Acetyl (Protein N-term);Oxidation (M) 1303.6442 0.6442012 3522 Q8TEX9 IPO4 Importin-4 yes yes 1 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 86.245 86.34 2 3.0653E-06 99736 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 122.26 93.171 93000000 0 0 0 3979100 0 10730000 6784600 4950900 4314100 13726000 8379900 10552000 7809700 7836500 13938000 34841 3522 31610 291637;291638;291639;291640;291641;291642;291643;291644;291645;291646;291647 230969;230970;230971;230972;230973;230974 230970 5025 5 MESAIAEGGASR Acetyl (Protein N-term);Oxidation (M) 1235.5452 0.54521543 1974 P78344 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.104 34.287 2 2.2777E-10 37928 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 143.89 127.69 873760000 0 0 0 52054000 53616000 59741000 64553000 51786000 56626000 68820000 96149000 143390000 90890000 68545000 67588000 34842 1974 31611 291648;291649;291650;291651;291652;291653;291654;291655;291656;291657;291658;291659 230975;230976;230977;230978;230979;230980;230981;230982;230983;230984;230985;230986;230987;230988 230986 3172 14 MESAIAEGGASR Acetyl (Protein N-term) 1219.5503 0.55030081 1974 P78344 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.927 56.053 2 3.4689E-06 63219 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 108.43 92.79 1469800000 0 0 0 67800000 79101000 81145000 105770000 121050000 85013000 117290000 179100000 175840000 117750000 127660000 212260000 34843 1974 31611 291660;291661;291662;291663;291664;291665;291666;291667;291668;291669;291670;291671 230989;230990;230991;230992;230993;230994;230995;230996;230997;230998;230999;231000 230998 12 MESALDQLK Unmodified 1033.5114 0.51139611 1392 P37837 TALDO1 Transaldolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 2 1 1 1 1 50.746 49.834 2 0.0032698 55031 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 103.56 47.441 163070000 0 48406000 0 3681500 0 0 0 0 0 0 19649000 21974000 0 0 69356000 34844 1392 31612 291672;291673;291674;291675;291676;291677;291678 231001;231002;231003;231004;231005;231006;231007;231008 231002 7 MESALDQLK Oxidation (M) 1049.5063 0.50631073 1392 P37837 TALDO1 Transaldolase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 40.395 40.955 2 0.0023793 44354 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 102.51 42.155 64608000 0 0 0 0 0 0 0 0 0 0 12341000 13999000 0 11198000 27070000 34845 1392 31612 291679;291680;291681;291682 231009;231010;231011;231012 231009 2158 3 MESCLAQVLQK Oxidation (M) 1321.637 0.63700733 3094 Q7Z460 CLASP1 CLIP-associating protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 61.024 60.825 2 0.0030766 69390 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 60.91 36.091 5109300 0 0 0 0 2986500 0 2122800 0 0 0 0 0 0 0 0 34846 3094 31613 291683;291684;291685 231013;231014 231013 4701 2 MESCLAQVLQK Unmodified 1305.6421 0.64209271 3094 Q7Z460 CLASP1 CLIP-associating protein 1 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 68.574 68.62 2 0.0067349 79125 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 72.23 49.159 7146800 0 0 0 0 0 4164200 0 0 0 0 0 0 2982600 0 0 34847 3094 31613 291686;291687 231015 231015 1 MESDFEQK Unmodified 1012.4172 0.41716137 417 O60610 DIAPH1 Protein diaphanous homolog 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 20.193 20.37 2 0.0068825 19777 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 92.47 67.472 39390000 0 0 0 4180100 0 8301200 2405300 2761000 3750000 5568900 5479100 0 0 0 6944300 34848 417 31614 291688;291689;291690;291691;291692;291693;291694;291695 231016;231017;231018;231019 231018 4 MESDFYLR Acetyl (Protein N-term);Oxidation (M) 1117.475 0.4750106 1846 P61326 MAGOH Protein mago nashi homolog yes yes 1 1 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 69.812 70.078 2 0.0013926 79858 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.116 70.171 9968500 0 0 0 0 0 0 1373200 0 0 0 0 0 0 3268300 5327000 34849 1846 31615 291696;291697;291698 231020;231021 231020 3000 2 MESDFYLR Acetyl (Protein N-term) 1101.4801 0.48009598 1846 P61326 MAGOH Protein mago nashi homolog yes yes 1 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 81.736 81.889 2 0.023273 94345 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.109 32.122 19011000 0 0 0 0 0 0 0 1500000 0 0 2025300 4075200 1207800 1852600 8350500 34850 1846 31615 291699;291700;291701;291702;291703;291704 231022 231022 1 MESEDLSGRELTIDSIMNK Acetyl (Protein N-term);2 Oxidation (M) 2241.0141 0.014078024 1331 P33981 TTK Dual specificity protein kinase TTK yes yes 1 2 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 18 2 2 1 1 2 1 2 2 2 1 2 74.595 74.705 2;3 9.9336E-07 86117 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 70.942 66.974 169530000 0 0 0 0 15951000 18339000 6677500 11875000 15446000 14578000 24776000 21451000 14896000 3906600 21639000 34851 1331 31616 291705;291706;291707;291708;291709;291710;291711;291712;291713;291714;291715;291716;291717;291718;291719;291720;291721;291722 231023;231024;231025;231026;231027;231028;231029;231030;231031;231032 231025 1989;1990 10 MESGFTSK Acetyl (Protein N-term);Oxidation (M) 943.3957 0.39569765 1411 P40261 NNMT Nicotinamide N-methyltransferase yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.43 4.07 2 5 2 1 1 1 1 1 46.653 48.369 1;2 0.0028119 27454 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 61.999 24.979 88335000 50773000 0 0 0 0 10041000 6743400 0 0 0 6938700 0 0 5814300 8024400 34852 1411 31617 291723;291724;291725;291726;291727;291728;291729 231033;231034;231035;231036;231037 231033 2218 3 MESGFTSK Acetyl (Protein N-term) 927.40078 0.40078303 1411 P40261 NNMT Nicotinamide N-methyltransferase yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.58 3.17 1 1 10 2 1 1 1 1 1 1 1 1 1 1 50.583 50.515 2 0.010661 50692 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 53.968 20.452 126920000 23943000 0 0 5362500 4442400 12914000 5552800 8171600 0 15690000 14970000 10840000 7343600 0 17693000 34853 1411 31617 291730;291731;291732;291733;291734;291735;291736;291737;291738;291739;291740;291741 231038;231039;231040;231041;231042;231043;231044;231045;231046;231047;231048;231049;231050 231048 13 MESGSTAASEEAR Acetyl (Protein N-term);Oxidation (M) 1382.562 0.56198771 927 P10644 PRKAR1A cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.899 19.095 2 5.4133E-17 18379 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 149.96 137.73 88733000 0 0 0 4501500 3087800 8040300 5634300 4690100 4363100 10462000 8299700 10167000 7766500 7058400 14662000 34854 927 31618 291742;291743;291744;291745;291746;291747;291748;291749;291750;291751;291752;291753 231051;231052;231053;231054;231055;231056;231057;231058;231059;231060;231061;231062 231054 1190 12 MESGSTAASEEAR Acetyl (Protein N-term) 1366.5671 0.56707309 927 P10644 PRKAR1A cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 32.541 32.732 2 9.5818E-09 35685 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 107.03 102.09 124310000 0 0 0 0 6478900 11783000 7759600 6677400 4588600 13652000 19106000 0 11094000 12079000 31094000 34855 927 31618 291754;291755;291756;291757;291758;291759;291760;291761;291762;291763 231063;231064;231065;231066;231067;231068;231069;231070;231071 231065 9 MESGSTAASEEARSLRECELYVQK Acetyl (Protein N-term) 2772.2695 0.26945786 927 P10644 PRKAR1A cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed yes yes 1 0 2 By MS/MS By MS/MS 2 0 2 1 1 78.453 72 3 7.4124E-20 92838 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.269 91.076 93273000 23094000 70179000 0 0 0 0 0 0 0 0 0 0 0 0 0 34856 927 31619 291764;291765 231072;231073 231073 2 MESGSTAASEEARSLRECELYVQK Acetyl (Protein N-term);Oxidation (M) 2788.2644 0.26437248 927 P10644 PRKAR1A cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed yes yes 1 1 2 By MS/MS By MS/MS 2 0 2 1 1 74.019 65.889 3 1.2425E-23 85762 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.224 64.54 22922000 22922000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34857 927 31619 291766;291767 231074;231075 231074 1190 2 MESLRLDGLQQR Oxidation (M) 1460.7406 0.7405612 4003 Q96TA1 FAM129B Niban-like protein 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 10 0 4 1 1 2 50.901 50.966 3 0.0017898 57484 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 55.04 38.508 43035000 0 0 0 0 0 30453000 12582000 0 0 0 0 0 0 0 0 34858 4003 31620 291768;291769;291770;291771 231076;231077;231078;231079;231080;231081 231076 5481 6 MESLRLDGLQQR Unmodified 1444.7456 0.74564657 4003 Q96TA1 FAM129B Niban-like protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 59.109 59.194 3 0.0022811 66665 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 49.423 44.269 79496000 0 0 0 6414000 2059400 11872000 4442300 5854100 2546800 7976000 0 6072600 5322200 7576800 19361000 34859 4003 31620 291772;291773;291774;291775;291776;291777;291778;291779;291780;291781;291782 231082;231083;231084;231085 231085 4 MESLYQCGFDDTVK Oxidation (M) 1707.712 0.71202276 1439 P41247 PNPLA4 Patatin-like phospholipase domain-containing protein 4 yes yes 0 1 0 By matching By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 63.807 63.792 2 0.00025481 72896 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 73.067 69.642 9624600 0 0 0 0 1848900 0 3380300 0 1620000 0 0 0 2775300 0 0 34860 1439 31621 291783;291784;291785;291786;291787 231086;231087;231088 231086 2264 3 MESMLNK Acetyl (Protein N-term) 893.39867 0.39867454 2932 Q6P3W7 SCYL2 SCY1-like protein 2 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 63.277 63.313 2 0.014183 72255 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 67.035 34.106 15718000 0 0 0 0 2354600 0 0 0 0 3895400 5405500 0 4062800 0 0 34861 2932 31622 291788;291789;291790;291791 231089;231090 231089 2 MESPASSQPASMPQSK Acetyl (Protein N-term);Oxidation (M) 1719.7444 0.74438552 1505 P46734 MAP2K3 Dual specificity mitogen-activated protein kinase kinase 3 yes yes 1 1 0 By MS/MS 1 0 1 1 80.529 85.792 2 0.0042165 61714 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 46.592 40.352 2012800 2012800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34862 1505 31623 291792 231091 231091 2378 1 MESPGESGAGSPGAPSPSSFTTGHLAR Acetyl (Protein N-term);Oxidation (M) 2629.1715 0.17145838 2340 Q13671 RIN1 Ras and Rab interactor 1 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 68.015 68.196 3 3.0049E-18 78340 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 60.943 57.545 32853000 0 0 0 0 0 8337600 0 0 0 6953800 4974300 6983600 5603900 0 0 34863 2340 31624 291793;291794;291795;291796;291797 231092;231093;231094;231095;231096 231094 3807 5 MESPGESGAGSPGAPSPSSFTTGHLAREK Acetyl (Protein N-term);Oxidation (M) 2886.309 0.30901449 2340 Q13671 RIN1 Ras and Rab interactor 1 yes yes 1 1 1 By MS/MS 2 0 1 1 63.986 60.227 3 2.2596E-08 74769 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 47.237 44.861 2958300 0 0 2958300 0 0 0 0 0 0 0 0 0 0 0 0 34864 2340 31625 291798 231097 231097 3807 1 MESQEPTESSQNGK Acetyl (Protein N-term) 1592.6624 0.66243003 4970 Q9UKK9 NUDT5 ADP-sugar pyrophosphatase yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.75 4.26 2 2 4 2 2 1 1 1 1 30.916 27.086 2 1.9002E-20 28082 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 141.08 136.47 85380000 15325000 16657000 0 0 0 0 0 0 0 0 13875000 8508700 0 8022600 22992000 34865 4970 31626 291799;291800;291801;291802;291803;291804;291805;291806 231098;231099;231100;231101;231102;231103;231104;231105;231106;231107;231108;231109;231110 231099 13 MESQEPTESSQNGK Acetyl (Protein N-term);Oxidation (M) 1608.6573 0.65734466 4970 Q9UKK9 NUDT5 ADP-sugar pyrophosphatase yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 6.29 4.3 2 1 4 1 2 1 1 1 1 14.548 14.065 2 2.7863E-63 22488 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 191.53 172.28 42019000 10240000 0 0 0 0 0 0 0 0 0 7846200 7064300 0 5827700 11040000 34866 4970 31626 291807;291808;291809;291810;291811;291812;291813 231111;231112;231113;231114;231115;231116 231115 6315 6 MESQLQNDSK Oxidation (M) 1194.5187 0.51866633 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7.3703 6.9306 2 0.00060747 4827 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 113.62 99.108 76977000 6449500 16637000 0 2676800 2394900 6876200 3347700 2478900 2933500 5886300 0 5720300 6347400 6942200 8286800 34867 4634 31627 291814;291815;291816;291817;291818;291819;291820;291821;291822;291823;291824;291825;291826;291827 231117;231118;231119;231120;231121;231122;231123;231124;231125;231126;231127;231128;231129 231120 6035 13 MESQLQNDSK Unmodified 1178.5238 0.52375171 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13.512 13.112 2 7.4903E-08 12730 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 152.11 124.86 211470000 8378100 90515000 0 3742400 5182000 14020000 6787000 5388700 6898100 11870000 11326000 9116400 11484000 11819000 14941000 34868 4634 31627 291828;291829;291830;291831;291832;291833;291834;291835;291836;291837;291838;291839;291840;291841 231130;231131;231132;231133;231134;231135;231136;231137;231138;231139;231140;231141;231142;231143;231144 231130 14 MESQLQNDSKK Unmodified 1306.6187 0.61871473 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 0 1 By MS/MS 2 0 1 1 11.404 8.1254 3 0.026171 11306 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 34.695 23.749 6509100 0 6509100 0 0 0 0 0 0 0 0 0 0 0 0 0 34869 4634 31628 291842 231145 231145 1 MESQLSASKPTGGLPETAR Unmodified 1958.9731 0.97313991 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching 10 0 5 1 1 1 1 1 46.901 47.353 3 0.0071363 53167 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 17.784 13.687 31340000 0 0 0 0 0 0 0 3345700 0 4427900 7975300 7006100 0 0 8585000 34870 5049 31629 291843;291844;291845;291846;291847 231146 231146 1 MESSLVASELPLLIEDLLEHEK Oxidation (M) 2510.2826 0.28257196 202 O14686 KMT2D Histone-lysine N-methyltransferase 2D yes yes 0 1 0 By MS/MS 2 0 1 1 104.05 95.919 3 0.00044748 123202 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.909 43.553 6651100 6651100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34871 202 31630 291848 231147 231147 270 1 MESSLVASELPLLIEDLLEHEK Unmodified 2494.2877 0.28765733 202 O14686 KMT2D Histone-lysine N-methyltransferase 2D yes yes 0 0 0 By MS/MS 2 0 1 1 104.65 96.521 3 0.00016108 123990 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.703 54.751 5922600 5922600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34872 202 31630 291849 231148 231148 1 MESTETEER Unmodified 1110.4499 0.44991806 2171 Q09472 EP300 Histone acetyltransferase p300 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 7.4651 7.6068 2 0.0030483 5953 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 91.318 62.169 38750000 0 0 0 2040700 2315100 0 2959200 3663800 3338800 2767700 6793400 3411100 3796600 3103100 4560200 34873 2171 31631 291850;291851;291852;291853;291854;291855;291856;291857;291858;291859;291860 231149;231150;231151;231152;231153;231154;231155;231156 231154 8 MESTETEERSTELK Unmodified 1668.7512 0.75124504 2171 Q09472 EP300 Histone acetyltransferase p300 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 23.192 22.436 3 0.00056626 23448 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 63.185 28.179 144970000 4530800 44140000 0 5601800 3890500 6357200 4840700 7785800 5554000 9756900 11174000 14689000 7179400 6413600 13058000 34874 2171 31632 291861;291862;291863;291864;291865;291866;291867;291868;291869;291870;291871;291872;291873;291874;291875 231157;231158;231159;231160;231161;231162;231163;231164 231158 8 MESTETEERSTELK Oxidation (M) 1684.7462 0.74615966 2171 Q09472 EP300 Histone acetyltransferase p300 yes yes 0 1 1 By MS/MS 2 0 1 1 20.785 17.071 2 0.043691 22533 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 61.353 32.626 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34875 2171 31632 291876 231165 231165 1 MESYDVIANQPVVIDNGSGVIK Acetyl (Protein N-term);Oxidation (M) 2405.1784 0.17844124 1837 P61163 ACTR1A Alpha-centractin yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching 9.06 2.68 1 1 16 1 1 1 1 2 2 1 1 1 2 2 1 1 1 88.223 87.897 2;3 3.306E-32 96029 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 114.46 101.14 150350000 6521800 31736000 0 2456600 2760600 15778000 10656000 2545700 7638300 7613900 21034000 24787000 2804900 4572300 9447200 34876 1837 31633 291877;291878;291879;291880;291881;291882;291883;291884;291885;291886;291887;291888;291889;291890;291891;291892;291893;291894 231166;231167;231168;231169;231170;231171 231170 2981 6 MESYDVIANQPVVIDNGSGVIK Acetyl (Protein N-term) 2389.1835 0.18352661 1837 P61163 ACTR1A Alpha-centractin yes yes 1 0 0 By MS/MS By matching By MS/MS 7 4.24 1 2 1 1 1 96.077 96.46 2;3 2.7568E-12 97379 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 87.062 77.213 27722000 0 24169000 0 0 0 0 0 0 0 1154200 0 0 0 0 2399100 34877 1837 31633 291895;291896;291897 231172;231173 231173 2 MESYHKPDQQK Acetyl (Protein N-term);Oxidation (M) 1447.6402 0.64017845 1249 P29401 TKT Transketolase yes yes 1 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.88 3.89 7 2 8 2 5 2 1 1 1 1 1 1 1 1 12.661 11.002 2;3 6.3021E-06 14173 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 115.78 104.62 6043100000 247690000 5411400000 73757000 6461800 4520000 0 0 5133200 4488700 0 110070000 95712000 0 61504000 22289000 34878 1249 31634 291898;291899;291900;291901;291902;291903;291904;291905;291906;291907;291908;291909;291910;291911;291912;291913;291914 231174;231175;231176;231177;231178;231179;231180;231181;231182;231183;231184;231185;231186;231187;231188;231189 231181 1841 14 MESYHKPDQQK Acetyl (Protein N-term) 1431.6453 0.64526383 1249 P29401 TKT Transketolase yes yes 1 0 1 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.81 3.47 4 2 15 2 4 1 1 1 1 1 1 2 2 1 2 2 21.391 20.352 2;3 1.0739E-68 26939 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 222.3 187.14 7033000000 215970000 4755000000 0 14760000 22450000 0 21666000 17925000 17628000 26303000 366090000 336860000 26018000 295350000 917020000 34879 1249 31634 291915;291916;291917;291918;291919;291920;291921;291922;291923;291924;291925;291926;291927;291928;291929;291930;291931;291932;291933;291934;291935 231190;231191;231192;231193;231194;231195;231196;231197;231198;231199;231200;231201;231202;231203 231191 11 METEADAPSPAPSLGER Oxidation (M) 1772.7887 0.78869318 2201 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 45.267 45.649 2 8.2814E-29 51316 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 116.01 105.96 12223000 0 0 0 0 0 3341000 0 0 0 0 0 3823700 5058400 0 0 34880 2201 31635 291936;291937;291938;291939 231204;231205;231206 231205 3573 3 METEADAPSPAPSLGERLEPR Oxidation (M) 2268.0692 0.069225137 2201 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes yes 0 1 1 By MS/MS 10 0 1 1 60.662 60.783 3 5.814E-05 69358 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 49.089 45.484 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34881 2201 31636 291940 231207 231207 3573 1 METEQPEETFPNTETNGEFGK Acetyl (Protein N-term) 2456.0326 0.032564859 1868 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.77 2 1 23 2 1 2 1 2 2 2 2 2 2 2 2 2 2 78.81 78.588 2;3;5 2.5384E-55 87311 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 124.2 122.46 706260000 16677000 12150000 0 22796000 7794900 55119000 32529000 37874000 22380000 87581000 73423000 60469000 39854000 59522000 178090000 34882 1868 31637 291941;291942;291943;291944;291945;291946;291947;291948;291949;291950;291951;291952;291953;291954;291955;291956;291957;291958;291959;291960;291961;291962;291963;291964;291965;291966 231208;231209;231210;231211;231212;231213;231214;231215;231216;231217;231218;231219;231220;231221;231222;231223;231224;231225;231226;231227 231216 19 METEQPEETFPNTETNGEFGK Acetyl (Protein N-term);Oxidation (M) 2472.0275 0.027479482 1868 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes yes 1 1 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.45 3.29 2 2 18 3 1 1 1 2 2 1 2 2 1 2 2 2 71.682 70.956 2;3 3.6983E-64 82192 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 140.82 140.82 728900000 31052000 0 0 10481000 10109000 85843000 76488000 10756000 41713000 110300000 46125000 120360000 69648000 0 116030000 34883 1868 31637 291967;291968;291969;291970;291971;291972;291973;291974;291975;291976;291977;291978;291979;291980;291981;291982;291983;291984;291985;291986;291987;291988 231228;231229;231230;231231;231232;231233;231234;231235;231236;231237;231238;231239;231240;231241;231242;231243 231238 3021 9 METESGNQEK Acetyl (Protein N-term);Oxidation (M) 1209.4819 0.48194647 2684 Q4G0J3 LARP7 La-related protein 7 yes yes 1 1 0 By MS/MS 1 0 1 1 7.3007 24.445 2 0.00047161 5134 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 111.46 91.678 34886000 0 34886000 0 0 0 0 0 0 0 0 0 0 0 0 0 34884 2684 31638 291989 231244;231245 231245 4342 2 METFSPAVGNR Unmodified 1207.5656 0.56555694 3098 Q7Z4H7 HAUS6 HAUS augmin-like complex subunit 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 47.554 47.964 2 0.0064345 54191 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 56.563 19.087 35676000 0 0 0 0 0 0 6351600 0 0 0 14358000 0 0 0 14966000 34885 3098 31639 291990;291991;291992 231246;231247;231248 231246 3 METFSPAVGNR Oxidation (M) 1223.5605 0.56047157 3098 Q7Z4H7 HAUS6 HAUS augmin-like complex subunit 6 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 38.966 39.071 2 0.018273 43420 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 60.717 48.491 29098000 0 0 0 2775000 2621500 3302500 2478400 0 0 3162400 4810300 5158000 4789800 0 0 34886 3098 31639 291993;291994;291995;291996;291997;291998;291999;292000 231249 231249 4708 0 METILEQQR Acetyl (Protein N-term) 1188.5809 0.58087266 2202 Q12874 SF3A3 Splicing factor 3A subunit 3 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 80.198 79.677 2 0.0010833 92397 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 150.05 138.83 142520000 0 8575900 0 14885000 13442000 14312000 15047000 18260000 11585000 0 0 0 18751000 27658000 0 34887 2202 31640 292001;292002;292003;292004;292005;292006;292007;292008;292009 231250;231251;231252;231253;231254;231255;231256;231257 231253 8 METILEQQRR Acetyl (Protein N-term) 1344.682 0.68198369 2202 Q12874 SF3A3 Splicing factor 3A subunit 3 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 72.946 72.765 2 2.4278E-16 83010 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 166.16 129.47 852140000 0 0 14845000 39857000 46148000 48694000 0 66876000 47079000 78505000 98364000 102250000 59434000 74953000 175140000 34888 2202 31641 292010;292011;292012;292013;292014;292015;292016;292017;292018;292019;292020;292021 231258;231259;231260;231261;231262;231263;231264;231265;231266;231267;231268;231269;231270;231271 231261 12 METILEQQRR Acetyl (Protein N-term);Oxidation (M) 1360.6769 0.67689831 2202 Q12874 SF3A3 Splicing factor 3A subunit 3 yes yes 1 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 45.239 45.476 2 0.01026 50821 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 59.245 44.094 368930000 0 0 0 0 20517000 19571000 34093000 38513000 26665000 41034000 37366000 52114000 35190000 26373000 37496000 34889 2202 31641 292022;292023;292024;292025;292026;292027;292028;292029;292030;292031;292032 231272;231273;231274;231275 231272 3576 4 METILEQQRRYHEEK Acetyl (Protein N-term);Oxidation (M) 2046.9793 0.97928792 2202 Q12874 SF3A3 Splicing factor 3A subunit 3 yes yes 1 1 2 By MS/MS 2 0 1 1 52.3 44.286 3 0.0032417 61060 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.001 42.86 7469300 7469300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34890 2202 31642 292033 231276 231276 3576 0 METMASPGK Acetyl (Protein N-term);Oxidation (M) 1008.4256 0.42561757 424 O60684 KPNA6 Importin subunit alpha-7 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 25.605 25.823 2 0.0046357 27645 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 46.158 20.421 20197000 0 0 0 0 1783600 0 2184600 0 0 4724700 4593800 4039200 0 2871100 0 34891 424 31643 292034;292035;292036;292037;292038;292039 231277;231278;231279;231280;231281 231279 536;537 5 METMASPGK Acetyl (Protein N-term) 992.4307 0.43070295 424 O60684 KPNA6 Importin subunit alpha-7 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.88 2.98 1 7 1 1 1 1 1 1 1 1 54.564 55.686 2 0.0031893 50588 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 65.465 36.316 41933000 5561700 0 0 0 0 0 4227500 3826800 0 6151100 0 0 11734000 0 10431000 34892 424 31643 292040;292041;292042;292043;292044;292045;292046;292047 231282;231283;231284;231285;231286;231287;231288;231289;231290;231291 231291 10 METNYQRFTIDK Unmodified 1544.7293 0.72932781 624 O95163 IKBKAP Elongator complex protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 60.49 52.248 3 0.014742 70706 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.023 47.546 56730000 56730000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34893 624 31644 292048 231292 231292 1 METPLDVLSR Acetyl (Protein N-term) 1201.6013 0.60127375 2371 Q14135 VGLL4 Transcription cofactor vestigial-like protein 4 yes yes 1 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 92.059 92.205 2 0.0033304 106744 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.283 51.436 5562700 0 0 0 0 0 0 502660 0 0 827700 1476800 0 0 724120 2031400 34894 2371 31645 292049;292050;292051;292052;292053 231293;231294 231294 2 METPPVNTIGEK Acetyl (Protein N-term);Oxidation (M) 1372.6544 0.65443153 4927 Q9UIM3 FKBPL FK506-binding protein-like yes yes 1 1 0 By MS/MS 1 0 1 1 101.47 106.73 2 0.019341 86448 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 43.297 36.694 3934900 3934900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34895 4927 31646 292054 231295;231296 231296 6277 2 METPSQR Acetyl (Protein N-term) 889.39637 0.39636635 757 P02545 LMNA Prelamin-A/C;Lamin-A/C yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 25.362 25.558 2 0.041451 27061 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 40.098 24.659 73960000 0 0 0 0 3635500 7212600 6751600 10768000 2477800 7918800 9583800 12501000 5806800 7303400 0 34896 757 31647 292055;292056;292057;292058;292059;292060;292061;292062;292063;292064 231297 231297 1 METPSQR Acetyl (Protein N-term);Oxidation (M) 905.39128 0.39128097 757 P02545 LMNA Prelamin-A/C;Lamin-A/C yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 10.163 10.355 2 0.0086575 8802 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 51.787 33.409 19256000 0 0 0 0 1806600 0 0 0 0 0 0 5879100 0 4425400 7145400 34897 757 31647 292065;292066;292067;292068 231298;231299 231299 909 2 METQLQSIFEEVVK Acetyl (Protein N-term);Oxidation (M) 1737.8495 0.84950252 4998 Q9ULK4 MED23 Mediator of RNA polymerase II transcription subunit 23 yes yes 1 1 0 By MS/MS 2 0 1 1 100.27 95.556 2 0.00010748 118181 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.452 74.226 9225400 0 9225400 0 0 0 0 0 0 0 0 0 0 0 0 0 34898 4998 31648 292069 231300 231300 6340 1 METQLQSIFEEVVK Acetyl (Protein N-term) 1721.8546 0.8545879 4998 Q9ULK4 MED23 Mediator of RNA polymerase II transcription subunit 23 yes yes 1 0 0 By MS/MS 2 0 1 1 103.21 98.476 2 1.2821E-15 121658 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.39 111.25 14821000 0 14821000 0 0 0 0 0 0 0 0 0 0 0 0 0 34899 4998 31648 292070 231301 231301 1 METSALK Acetyl (Protein N-term) 820.40005 0.40005474 1424 P40937 RFC5 Replication factor C subunit 5 yes yes 1 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 44.647 44.9 1 0.0029947 50766 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 114.78 55.142 191360000 0 0 0 10457000 0 18031000 0 15194000 10631000 17612000 27806000 27366000 21821000 17498000 24944000 34900 1424 31649 292071;292072;292073;292074;292075;292076;292077;292078;292079;292080 231302;231303;231304;231305;231306;231307;231308;231309;231310;231311;231312;231313 231303 11 METSHNQCQELK Unmodified 1503.6446 0.6446119 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12.569 12.293 3 0.012655 10638 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.767 34.535 174270000 0 111550000 3733300 2348500 2808400 4096200 3392200 2989400 3065000 5013100 4654300 6903400 6058700 5549800 12112000 34901 1286 31650 292081;292082;292083;292084;292085;292086;292087;292088;292089;292090;292091;292092;292093;292094 231314;231315;231316;231317 231315 4 METTHSFGNPSISVSTQQPPK Oxidation (M) 2288.0743 0.074310515 3706 Q93052 LPP Lipoma-preferred partner yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 53.578 54.234 3 5.8833E-05 61143 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.229 44.84 20324000 0 0 0 0 0 0 0 0 0 0 0 9609000 0 0 10714000 34902 3706 31651 292095;292096 231318;231319 231319 5285 2 METTHSFGNPSISVSTQQPPK Unmodified 2272.0794 0.079395893 3706 Q93052 LPP Lipoma-preferred partner yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 57.556 57.954 3 2.0502E-05 65080 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.611 43.111 40507000 0 0 0 0 0 0 0 0 0 0 7585300 0 0 11034000 21888000 34903 3706 31651 292097;292098;292099 231320;231321;231322;231323 231320 4 METVISSDSSPAVENEHPQETPESNNSVYTSFMK Acetyl (Protein N-term) 3812.6669 0.66692965 1742 P54619 PRKAG1 5'-AMP-activated protein kinase subunit gamma-1 yes yes 1 0 0 By MS/MS 2 0 2 2 90.162 85.266 3;4 3.1583E-118 105933 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.77 132.89 62918000 0 62918000 0 0 0 0 0 0 0 0 0 0 0 0 0 34904 1742 31652 292100;292101 231324;231325;231326 231325 3 MEVAANCSLRVK Acetyl (Protein N-term);Oxidation (M) 1434.6959 0.69591919 3975 Q96RS6 NUDCD1 NudC domain-containing protein 1 yes yes 1 1 1 By MS/MS By matching 2.33 0.471 2 1 2 1 50.769 45.908 2 1.6449E-05 56867 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 98.943 87.095 46195000 0 43251000 2943700 0 0 0 0 0 0 0 0 0 0 0 0 34905 3975 31653 292102;292103;292104 231327;231328 231328 5461 2 MEVAANCSLRVK Acetyl (Protein N-term) 1418.701 0.70100457 3975 Q96RS6 NUDCD1 NudC domain-containing protein 1 yes yes 1 0 1 By MS/MS 2.5 0.5 1 1 2 69.918 64.679 2 0.0044849 82418 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.08 52.413 64875000 0 64875000 0 0 0 0 0 0 0 0 0 0 0 0 0 34906 3975 31653 292105;292106 231329;231330;231331;231332 231330 4 MEVAEPSSPTEEEEEEEEHSAEPRPR Acetyl (Protein N-term) 3051.2887 0.28873256 4704 Q9NWV8 BABAM1 BRISC and BRCA1-A complex member 1 yes yes 1 0 1 By MS/MS 2 0 1 1 65.372 57.083 3 6.8098E-05 76730 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.937 38.742 5629700 5629700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34907 4704 31654 292107 231333 231333 1 MEVAVEK Acetyl (Protein N-term);Oxidation (M) 862.41062 0.41061943 261 O15164 TRIM24 Transcription intermediary factor 1-alpha yes yes 1 1 0 By MS/MS 1 0 1 1 99.46 104.72 2 0.046994 84163 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 44.395 20.423 4376600 4376600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34908 261 31655 292108 231334 231334 0 MEVDEAEK Oxidation (M) 965.40118 0.40117696 4011 Q99460 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.21 3.43 1 2 11 2 1 1 2 1 1 1 1 2 1 1 14.287 14.25 2 0.0034021 5294 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 119.29 69.932 178140000 42909000 11653000 0 3527600 14734000 8794000 2207900 0 0 21860000 31682000 30119000 0 4110400 6541000 34909 4011 31656 292109;292110;292111;292112;292113;292114;292115;292116;292117;292118;292119;292120;292121;292122 231335;231336;231337;231338;231339;231340;231341;231342;231343;231344;231345 231342 5501 10 MEVDEAEK Unmodified 949.40626 0.40626233 4011 Q99460 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 16.809 15.667 2 0.0068017 15900 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 96.253 57.461 314810000 15445000 72574000 0 0 0 29105000 0 0 0 41132000 69321000 87235000 0 0 0 34910 4011 31656 292123;292124;292125;292126;292127;292128 231346;231347;231348;231349;231350;231351 231347 6 MEVDQPEPADTQPEDISESK Unmodified 2243.974 0.97398735 2171 Q09472 EP300 Histone acetyltransferase p300 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 53.425 53.421 2 7.306E-07 59950 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.037 59.459 40646000 0 0 0 3524100 2644500 0 3393900 8198800 0 0 0 0 7443600 0 15441000 34911 2171 31657 292129;292130;292131;292132;292133;292134;292135 231352;231353;231354;231355;231356;231357;231358 231353 7 MEVDYSATVDQR Oxidation (M) 1428.6191 0.61910866 130 O00232 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 37.438 37.852 2 2.0707E-08 41491 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 129.16 87.047 47483000 0 0 0 0 0 11144000 0 0 0 8905900 0 14005000 0 0 13428000 34912 130 31658 292136;292137;292138;292139 231359;231360;231361 231361 178 2 MEVDYSATVDQR Unmodified 1412.6242 0.62419403 130 O00232 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 49.148 49.25 2 0.00024639 55024 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 110.39 70.386 16686000 0 0 0 0 2628300 0 0 0 0 0 0 14058000 0 0 0 34913 130 31658 292140;292141 231362 231362 0 MEVDYSATVDQRLPECAK Oxidation (M) 2126.9613 0.96125459 130 O00232 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.91 3.42 2 1 8 1 2 1 1 1 1 1 1 1 1 59.151 58.241 3 2.0302E-11 66661 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 87.85 78.919 224830000 0 153430000 0 0 8195700 7591800 0 0 4936100 9351700 15239000 16165000 4347400 0 5574400 34914 130 31659 292142;292143;292144;292145;292146;292147;292148;292149;292150;292151;292152 231363;231364;231365;231366;231367;231368;231369;231370;231371;231372;231373;231374;231375;231376 231366 178 14 MEVDYSATVDQRLPECAK Unmodified 2110.9663 0.96633997 130 O00232 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 6.45 3.89 4 1 6 1 3 1 1 1 1 1 1 1 67.383 64.956 3 5.5933E-55 82560 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 149.52 143.54 250130000 19866000 191300000 6683200 0 0 3887800 2443700 0 0 7937900 6369500 5955200 0 0 5685800 34915 130 31659 292153;292154;292155;292156;292157;292158;292159;292160;292161;292162;292163 231377;231378;231379;231380;231381;231382;231383;231384;231385;231386;231387;231388;231389 231380 13 MEVEAVCGGAGEVEAQDSDPAPAFSK Acetyl (Protein N-term);Oxidation (M) 2708.1582 0.15817608 1348 P35250 RFC2 Replication factor C subunit 2 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.71 3.15 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81.029 81.518 3 4.9449E-34 89892 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 91.722 90.739 290420000 13068000 7733000 0 9158000 27802000 29927000 24430000 19537000 18147000 32842000 23432000 33808000 9038500 15960000 25540000 34916 1348 31660 292164;292165;292166;292167;292168;292169;292170;292171;292172;292173;292174;292175;292176;292177 231390;231391;231392;231393;231394;231395;231396;231397;231398;231399;231400;231401;231402;231403;231404;231405;231406 231404 2049 17 MEVEAVCGGAGEVEAQDSDPAPAFSK Acetyl (Protein N-term) 2692.1633 0.16326146 1348 P35250 RFC2 Replication factor C subunit 2 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 5.5 4.5 2 2 1 1 1 1 93.347 94.851 3 4.3267E-31 95243 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 102.67 96.026 46622000 11212000 23674000 0 0 3054200 0 0 0 0 8682600 0 0 0 0 0 34917 1348 31660 292178;292179;292180;292181 231407;231408;231409;231410 231409 4 MEVISLQNEK Unmodified 1189.6013 0.60127375 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55.901 55.005 2 4.4966E-08 62408 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 154.49 105.93 468930000 6512800 170820000 0 17135000 16030000 21152000 18862000 19400000 16118000 26934000 34445000 25532000 23617000 25447000 46920000 34918 3676 31661 292182;292183;292184;292185;292186;292187;292188;292189;292190;292191;292192;292193;292194;292195 231411;231412;231413;231414;231415;231416;231417;231418;231419;231420;231421;231422;231423;231424;231425 231412 15 MEVISLQNEK Oxidation (M) 1205.5962 0.59618837 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 43.427 42.511 2 8.3787E-06 54541 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 139.74 60.969 231160000 219260 96442000 0 11594000 5742000 8903400 8402900 6907300 10002000 12341000 15973000 19214000 13041000 8144100 14229000 34919 3676 31661 292196;292197;292198;292199;292200;292201;292202;292203;292204;292205;292206;292207;292208;292209;292210;292211 231426;231427;231428;231429;231430;231431;231432;231433;231434;231435;231436;231437;231438;231439;231440 231429 5217 14 MEVKPPPGRPQPDSGR Acetyl (Protein N-term);Oxidation (M) 1804.889 0.88901635 1679 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 yes yes 1 1 2 By MS/MS By matching By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 29.642 30.03 3 0.00074694 32283 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 45.33 39.67 77037000 0 0 0 0 0 0 9786500 4722300 0 0 0 18723000 20448000 0 23356000 34920 1679 31662 292212;292213;292214;292215;292216 231441;231442 231441 2688 1 MEVKPPPGRPQPDSGR Acetyl (Protein N-term) 1788.8941 0.89410173 1679 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 yes yes 1 0 2 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 42.119 42.504 3 4.8904E-11 46504 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.562 72.507 74077000 0 0 0 0 0 5740000 0 7920900 2930800 0 12913000 20244000 0 0 24328000 34921 1679 31662 292217;292218;292219;292220;292221;292222 231443;231444;231445;231446 231443 3 MEVLAAETTSQQERLQAIAEK Acetyl (Protein N-term) 2387.2002 0.20023931 538 O75781 PALM Paralemmin-1 yes yes 1 0 1 By MS/MS 2 0 1 1 92.809 90.315 3 0.00024932 109303 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 51.819 43.632 1145600 0 0 1145600 0 0 0 0 0 0 0 0 0 0 0 0 34922 538 31663 292223 231447 231447 1 MEVMNLMEQPIK Acetyl (Protein N-term) 1503.7135 0.71354309 1010 P14923 JUP Junction plakoglobin yes yes 1 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 97.888 95.614 2 7.3462E-15 116428 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.25 118.49 86494000 0 83691000 0 0 0 0 0 2803600 0 0 0 0 0 0 0 34923 1010 31664 292224;292225 231448;231449 231448 2 MEVMNLMEQPIK Acetyl (Protein N-term);3 Oxidation (M) 1551.6983 0.69828696 1010 P14923 JUP Junction plakoglobin yes yes 1 3 0 By MS/MS By MS/MS 10 0 3 1 2 63.346 63.235 2 0.00013335 73124 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 70.1 62.454 29239000 0 0 0 8031700 0 0 0 21207000 0 0 0 0 0 0 0 34924 1010 31664 292226;292227;292228 231450;231451;231452 231452 1392;1393;1396 3 MEVMNLMEQPIK Acetyl (Protein N-term);2 Oxidation (M) 1535.7034 0.70337233 1010 P14923 JUP Junction plakoglobin yes yes 1 2 0 By MS/MS 10 0 2 2 81.19 81.38 2 0.00039996 93681 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 60.434 49.269 12620000 0 0 0 0 0 0 0 12620000 0 0 0 0 0 0 0 34925 1010 31664 292229;292230 231453;231454 231453 1392;1393;1396 2 MEVMNLMEQPIK Acetyl (Protein N-term);Oxidation (M) 1519.7085 0.70845771 1010 P14923 JUP Junction plakoglobin yes yes 1 1 0 By MS/MS By matching 10 0 3 2 1 88.996 89.157 2 0.00035949 99952 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 62.303 56.062 8326600 0 0 0 0 0 0 0 7488200 0 0 0 0 838370 0 0 34926 1010 31664 292231;292232;292233 231455;231456 231455 1392;1393;1396 2 MEVQEQEEDISSLIR Oxidation (M) 1820.8462 0.84620806 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 75.912 76.025 2 2.4021E-21 87814 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 117.79 102.25 70265000 0 0 0 0 4049300 12328000 4033000 5027900 2972200 5547500 5078900 7631300 4420200 5233900 13943000 34927 1986 31665 292234;292235;292236;292237;292238;292239;292240;292241;292242;292243;292244 231457;231458;231459;231460;231461;231462;231463;231464;231465;231466;231467 231466 3224 9 MEVQEQEEDISSLIR Unmodified 1804.8513 0.85129344 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS 10 0 1 1 80.119 80.348 2 1.6197E-14 92556 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 123.84 101.3 11058000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11058000 34928 1986 31665 292245 231468;231469 231468 2 MEVTGDAGVPESGEIR Acetyl (Protein N-term);Oxidation (M) 1703.7672 0.76722946 138 O00273 DFFA DNA fragmentation factor subunit alpha yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 60.917 61.307 2 1.6582E-08 69312 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.021 80.892 24197000 0 0 0 0 0 0 1929500 0 0 0 5457900 8943900 0 0 7865800 34929 138 31666 292246;292247;292248;292249;292250 231470;231471;231472;231473;231474 231471 189 5 MEVTGDAGVPESGEIR Acetyl (Protein N-term) 1687.7723 0.77231483 138 O00273 DFFA DNA fragmentation factor subunit alpha yes yes 1 0 0 By MS/MS By MS/MS 10 0 2 1 1 74.413 74.655 2 1.0728E-10 85563 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 115.14 83.074 14383000 0 0 0 0 0 0 0 0 0 0 0 0 0 4335800 10047000 34930 138 31666 292251;292252 231475;231476 231475 2 MEVTGDAGVPESGEIRTLK Acetyl (Protein N-term);Oxidation (M) 2045.9939 0.99393493 138 O00273 DFFA DNA fragmentation factor subunit alpha yes yes 1 1 1 By MS/MS 2.5 0.5 1 1 2 71.07 65.89 2 2.0233E-52 83881 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 137.46 127.23 26007000 0 26007000 0 0 0 0 0 0 0 0 0 0 0 0 0 34931 138 31667 292253;292254 231477 231477 189 1 MEVTGDAGVPESGEIRTLK Acetyl (Protein N-term) 2029.999 0.99902031 138 O00273 DFFA DNA fragmentation factor subunit alpha yes yes 1 0 1 By MS/MS 2.5 0.5 1 1 2 78.934 74.857 2 1.6221E-26 93074 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.6 129.03 32664000 0 32664000 0 0 0 0 0 0 0 0 0 0 0 0 0 34932 138 31667 292255;292256 231478;231479 231478 2 MEVVEAAAAQLETLK Acetyl (Protein N-term);Oxidation (M) 1659.8389 0.83893784 3870 Q96HR8 NAF1 H/ACA ribonucleoprotein complex non-core subunit NAF1 yes yes 1 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 2 2 2 2 2 98.262 98.378 2 8.2829E-21 114139 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 112.51 99.079 35057000 0 0 0 0 891730 0 0 0 0 10650000 9783800 2906700 0 3537300 7287400 34933 3870 31668 292257;292258;292259;292260;292261;292262;292263;292264;292265;292266;292267 231480;231481;231482;231483;231484;231485;231486 231481 5379 7 MEVVEAAAAQLETLK Acetyl (Protein N-term) 1643.844 0.84402322 3870 Q96HR8 NAF1 H/ACA ribonucleoprotein complex non-core subunit NAF1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 104.11 99.398 2 2.9211E-58 123534 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 208.95 198.95 106290000 12477000 92294000 1520000 0 0 0 0 0 0 0 0 0 0 0 0 34934 3870 31668 292268;292269;292270;292271 231487;231488;231489;231490;231491;231492;231493 231489 7 MEWSGICTTQQVK Unmodified 1566.717 0.71704856 4973 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 63.066 63.451 2 2.5907E-09 71814 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 114.83 87.092 9664000 0 0 0 0 0 0 0 0 0 0 0 0 0 4757500 4906500 34935 4973 31669 292272;292273;292274 231494;231495;231496 231495 3 MEYETLSK Unmodified 999.4583 0.45829791 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 33.851 34.191 2 0.028576 37610 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 56.659 42.884 31898000 0 0 0 0 0 0 3805300 0 0 3862700 5820800 0 7270800 5106100 6031600 34936 2446 31670 292275;292276;292277;292278;292279;292280 231497;231498 231498 2 MFADYLAHESR Unmodified 1338.6027 0.60267073 190 O14579 COPE Coatomer subunit epsilon yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 59.449 59.686 3 0.014819 67141 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 34.386 32.685 33090000 0 0 0 0 0 3314100 2104000 3287200 2344200 0 4875300 0 3129300 0 14036000 34937 190 31671 292281;292282;292283;292284;292285;292286;292287 231499;231500 231499 2 MFADYLAHESRR Unmodified 1494.7038 0.70378176 190 O14579 COPE Coatomer subunit epsilon yes yes 0 0 1 By matching By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 51.922 52.332 3 0.00015775 57957 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.48 36.138 45358000 0 0 0 0 0 0 0 0 1924200 0 0 17224000 4705200 2279900 19224000 34938 190 31672 292288;292289;292290;292291;292292 231501;231502;231503;231504;231505 231502 4 MFADYLAHESRR Oxidation (M) 1510.6987 0.69869638 190 O14579 COPE Coatomer subunit epsilon yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 44.814 45.064 3 0.0026816 49776 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 45.829 26.729 98576000 0 0 0 4940200 0 0 7425000 8534200 9212000 0 12320000 18951000 0 12440000 24754000 34939 190 31672 292293;292294;292295;292296;292297;292298;292299;292300 231506;231507 231507 261 1 MFAEIMMK 3 Oxidation (M) 1047.4439 0.44391017 3579 Q8WWY3 PRPF31 U4/U6 small nuclear ribonucleoprotein Prp31 yes yes 0 3 0 By MS/MS 2 0 1 1 36.374 32.99 2 0.020019 41647 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 55.441 41.769 3180600 0 0 3180600 0 0 0 0 0 0 0 0 0 0 0 0 34940 3579 31673 292301 231508 231508 5074;5075;5076 0 MFDCRDVAFTVGEGEDHDIPIGIDK Unmodified 2835.2844 0.28437965 2294 Q13451 FKBP5 Peptidyl-prolyl cis-trans isomerase FKBP5;Peptidyl-prolyl cis-trans isomerase FKBP5, N-terminally processed yes yes 0 0 1 By MS/MS 2 0 1 1 88.921 80.79 4 0.0025177 105122 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 35.016 28.44 7961200 7961200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34941 2294 31674 292302 231509 231509 1 MFDMGFEPQVMR 3 Oxidation (M) 1534.6255 0.62545636 3041 Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 0 3 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 59.054 59.109 2 0.003236 67499 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 57.598 50.392 18994000 0 0 0 0 3087600 3095900 3233300 2158200 0 4433200 2985800 0 0 0 0 34942 3041 31675 292303;292304;292305;292306;292307;292308 231510;231511 231510 4654;4655;4656 2 MFDQQICHR Unmodified 1233.5383 0.53829634 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 33.242 33.545 3 0.022675 36535 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 37.549 29.624 23865000 0 0 0 0 0 3171000 0 0 1725500 3003100 3185500 4569000 4340900 3869800 0 34943 2193 31676 292309;292310;292311;292312;292313;292314;292315 231512 231512 1 MFDVGGQR Unmodified 908.41744 0.41743614 872;790 P04899;P11488;P19087;A8MTJ3;P08754 GNAI2;GNAT1;GNAT2;GNAT3;GNAI3 Guanine nucleotide-binding protein G(i) subunit alpha-2;Guanine nucleotide-binding protein G(t) subunit alpha-1;Guanine nucleotide-binding protein G(t) subunit alpha-2;Guanine nucleotide-binding protein G(t) subunit alpha-3;Guanine nucleotide-binding protein G(k) subunit alpha no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 38.508 38.692 2 0.020537 43264 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 62.717 49.046 76165000 0 0 0 5082300 5996700 5710100 5174600 6902200 0 6581700 9408800 5716300 9138000 7714900 8739200 34944 790;872 31677 292316;292317;292318;292319;292320;292321;292322;292323;292324;292325;292326 231513;231514;231515;231516;231517 231513 5 MFDVGGQR Oxidation (M) 924.41235 0.41235077 872;790 P04899;P11488;P19087;A8MTJ3;P08754 GNAI2;GNAT1;GNAT2;GNAT3;GNAI3 Guanine nucleotide-binding protein G(i) subunit alpha-2;Guanine nucleotide-binding protein G(t) subunit alpha-1;Guanine nucleotide-binding protein G(t) subunit alpha-2;Guanine nucleotide-binding protein G(t) subunit alpha-3;Guanine nucleotide-binding protein G(k) subunit alpha no no 0 1 0 By MS/MS By MS/MS By matching By matching By MS/MS 10 0 5 1 1 1 1 1 26.286 26.463 2 0.043532 28196 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 43.124 28.711 12934000 0 0 0 2292700 0 0 0 2537500 1252200 0 4211800 0 0 2639700 0 34945 790;872 31677 292327;292328;292329;292330;292331 231518 231518 1 MFDVLQR Unmodified 907.45857 0.45857268 2333 Q13625 TP53BP2 Apoptosis-stimulating of p53 protein 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 64.728 64.868 2 0.030762 73435 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.439 56.06 27298000 0 0 0 2778700 0 2620200 0 2007100 1794900 2815400 3021100 3307500 2413800 0 6539200 34946 2333 31678 292332;292333;292334;292335;292336;292337;292338;292339;292340 231519 231519 1 MFDYTDDPEGPVMPGSHSVER 2 Oxidation (M) 2396.9889 0.98892591 2170 Q09161 NCBP1 Nuclear cap-binding protein subunit 1 yes yes 0 2 0 By MS/MS By MS/MS 10 0 2 1 1 56.956 56.723 3 3.1497E-05 64683 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 49.528 45.089 15048000 0 0 0 0 4629600 10418000 0 0 0 0 0 0 0 0 0 34947 2170 31679 292341;292342 231520;231521 231520 3488;3489 2 MFDYTDDPEGPVMPGSHSVER Unmodified 2364.9991 0.99909666 2170 Q09161 NCBP1 Nuclear cap-binding protein subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 71.856 72.073 3 0.025926 82458 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 27.055 23.768 24064000 0 0 0 0 0 4746100 0 0 0 0 0 4614600 0 4246600 10457000 34948 2170 31679 292343;292344;292345;292346 231522 231522 0 MFDYTDDPEGPVMPGSHSVER Oxidation (M) 2380.994 0.99401128 2170 Q09161 NCBP1 Nuclear cap-binding protein subunit 1 yes yes 0 1 0 By matching By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 65.812 65.988 3 9.6818E-05 75648 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 45.704 41.984 14633000 0 0 0 0 0 2428700 0 2429900 2190400 0 0 4700900 2882900 0 0 34949 2170 31679 292347;292348;292349;292350;292351 231523 231523 3488;3489 1 MFEDPETTR Oxidation (M) 1140.4757 0.47573888 1809 P60228 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.949 28.147 2 0.0020779 30127 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 92.439 36.429 107570000 0 0 0 5966700 5842600 8335000 10279000 6201200 6816900 9541000 11333000 14565000 10966000 8248800 9469900 34950 1809 31680 292352;292353;292354;292355;292356;292357;292358;292359;292360;292361;292362;292363 231524;231525;231526;231527;231528;231529;231530;231531;231532;231533 231527 2933 9 MFEDPETTR Unmodified 1124.4808 0.48082426 1809 P60228 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.455 36.635 2 0.0030483 41218 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 91.318 43.469 277370000 0 0 0 13766000 12329000 18706000 13934000 16654000 14579000 22337000 26913000 29997000 28433000 31766000 47959000 34951 1809 31680 292364;292365;292366;292367;292368;292369;292370;292371;292372;292373;292374;292375 231534;231535;231536 231536 3 MFEELGQR Oxidation (M) 1024.4648 0.46478027 3633 Q92598 HSPH1 Heat shock protein 105 kDa yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 3 1 2 1 35.325 35.844 2 0.0077916 38697 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 76.035 60.595 46250000 0 0 0 0 0 0 0 0 0 0 7203400 10009000 2727500 13196000 13115000 34952 3633 31681 292376;292377;292378;292379;292380;292381;292382;292383 231537;231538;231539;231540;231541 231539 5136 4 MFEELGQR Unmodified 1008.4699 0.46986564 3633 Q92598 HSPH1 Heat shock protein 105 kDa yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 47.995 48.141 2 0.011906 52911 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.854 64.486 60057000 0 0 0 0 1854600 0 0 0 0 0 0 0 0 16419000 41783000 34953 3633 31681 292384;292385;292386 231542;231543;231544 231543 3 MFEIVFEDPK Oxidation (M) 1269.5951 0.59512574 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.39 3.7 5 1 12 1 4 1 1 1 1 1 1 1 1 1 1 1 1 1 80.578 79.585 2 0.00096795 92259 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 90.906 79.684 233180000 71545000 42969000 8968800 2625200 4541000 11510000 6276000 4836400 8838000 11196000 9430800 15856000 6754200 9017800 18816000 34954 848 31682 292387;292388;292389;292390;292391;292392;292393;292394;292395;292396;292397;292398;292399;292400;292401;292402;292403;292404 231545;231546;231547;231548;231549;231550;231551;231552;231553;231554;231555;231556;231557;231558;231559;231560 231546 1057 16 MFEIVFEDPK Unmodified 1253.6002 0.60021112 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.25 3.34 2 1 1 2 1 1 86.747 84.805 2 0.01123 97837 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.608 49.824 19900000 1683100 0 3604900 0 0 0 0 0 0 0 0 0 0 0 14612000 34955 848 31682 292405;292406;292407;292408 231561;231562;231563;231564 231562 4 MFESFIESVPLLK Oxidation (M) 1554.8004 0.80036749 990 P13861 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.2 3.92 3 2 1 1 1 1 1 95.957 92.933 2 4.029E-21 115842 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 141.93 105.51 54543000 20470000 29334000 1032300 0 0 0 0 0 0 1253000 0 0 0 0 2453300 34956 990 31683 292409;292410;292411;292412;292413 231565;231566;231567;231568 231567 1340 4 MFESFIESVPLLK Unmodified 1538.8055 0.80545286 990 P13861 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 101.18 94.758 2 0.0021013 117047 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.417 69.297 23428000 7812200 15616000 0 0 0 0 0 0 0 0 0 0 0 0 0 34957 990 31683 292414;292415 231569 231569 1 MFFDAELSQMQTHVSDTSVVLSMDNNR 3 Oxidation (M) 3149.374 0.37399929 74 CON__P13647;P13647 KRT5 Keratin, type II cytoskeletal 5 no no 0 3 0 By MS/MS By matching By matching 10 0 3 1 1 1 79.067 79.015 3 2.6502E-08 91499 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 43.162 40.88 + 15835000 0 0 0 4885500 0 0 0 0 0 8170500 2778600 0 0 0 0 34958 74 31684 292416;292417;292418 231570 231570 99;100;101 1 MFFDALYDEDVVK Oxidation (M) 1606.7225 0.7225111 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 1 2 1 2 2 2 2 2 2 2 2 85.521 85.618 2 2.4081E-12 99099 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 124.1 115.69 323360000 0 0 0 3601400 7228800 36329000 5350600 22035000 28123000 41257000 32074000 38222000 15190000 23055000 70893000 34959 2102 31685 292419;292420;292421;292422;292423;292424;292425;292426;292427;292428;292429;292430;292431;292432;292433;292434;292435;292436;292437;292438;292439;292440 231571;231572;231573;231574;231575;231576;231577;231578;231579;231580;231581;231582;231583;231584;231585;231586;231587;231588;231589;231590;231591;231592;231593;231594;231595;231596 231583 3406 25 MFFDALYDEDVVK Unmodified 1590.7276 0.72759647 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 89.861 89.961 2 0.0020611 104117 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.781 69.237 7679100 0 0 0 0 0 571110 0 0 0 1785800 0 0 0 1010000 4312200 34960 2102 31685 292441;292442;292443;292444 231597 231597 1 MFFLDPSDLDVERDEEAVK Unmodified 2254.0464 0.04636443 587 O94806 PRKD3 Serine/threonine-protein kinase D3 yes yes 0 0 1 By MS/MS 2 0 1 1 94.883 86.752 3 2.1563E-06 112299 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.479 77.979 21701000 21701000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34961 587 31686 292445 231598 231598 1 MFGAGDEDDTDFLSPSGGAR Acetyl (Protein N-term);Oxidation (M) 2101.8535 0.85347828 2768 Q5T1M5 FKBP15 FK506-binding protein 15 yes yes 1 1 0 By MS/MS By matching By matching 10 0 3 1 1 1 82.191 82.281 2 3.1131E-06 95245 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 59.871 58.431 4594100 0 0 0 0 0 2237400 1134800 0 0 0 0 0 1221900 0 0 34962 2768 31687 292446;292447;292448 231599 231599 4397 1 MFGGPGTASR Unmodified 979.45455 0.45454993 870 P08670 VIM Vimentin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 28.882 29.173 2 0.014984 30871 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 50.372 41.55 24145000 0 0 0 0 0 8158800 0 5039600 0 0 0 10946000 0 0 0 34963 870 31688 292449;292450;292451 231600;231601 231601 2 MFGGPGTASR Oxidation (M) 995.44946 0.44946455 870 P08670 VIM Vimentin yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 19.899 20.136 2 0.0054512 20557 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 60.436 46.023 22864000 0 0 0 0 2736600 4413400 0 0 2352700 0 3787800 0 3223900 2886400 3463700 34964 870 31688 292452;292453;292454;292455;292456;292457;292458;292459 231602;231603;231604 231602 1122 3 MFGGPGTASRPSSSR Oxidation (M) 1509.6994 0.69942466 870 P08670 VIM Vimentin yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 3 2 2 1 2 1 1 2 3 20.33 20.518 3 8.9313E-21 20775 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 115.8 109.86 4590000000 0 0 0 339390000 486630000 453590000 469030000 386480000 411900000 6640300 492660000 445660000 316420000 354480000 427100000 34965 870 31689 292460;292461;292462;292463;292464;292465;292466;292467;292468;292469;292470;292471;292472;292473;292474;292475;292476;292477;292478;292479;292480;292481;292482 231605;231606;231607;231608;231609;231610;231611;231612;231613;231614;231615;231616;231617;231618;231619;231620;231621;231622;231623 231610 1122 11 MFGGPGTASRPSSSR Unmodified 1493.7045 0.70451004 870 P08670 VIM Vimentin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 27.329 27.629 3 0.00011979 29828 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 77.527 72.373 4176600000 0 0 0 0 0 391750000 317220000 251660000 260260000 468120000 489570000 716450000 411680000 271670000 598220000 34966 870 31689 292483;292484;292485;292486;292487;292488;292489;292490;292491;292492 231624;231625;231626;231627;231628;231629;231630 231625 1 MFGHSEIITSMK Unmodified 1379.6577 0.65774277 321 O43379 WDR62 WD repeat-containing protein 62 yes yes 0 0 0 By MS/MS 2 0 1 1 71.579 63.313 3 0.037487 84124 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 23.711 14.982 4393100 4393100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34967 321 31690 292493 231631 231631 1 MFGIDRDAIAQAVR Oxidation (M) 1577.7984 0.79841043 1249 P29401 TKT Transketolase yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 72.177 72.459 3 3.1011E-13 82569 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 108.17 96.254 109200000 0 0 0 0 0 0 0 0 0 0 13159000 29542000 0 15026000 51478000 34968 1249 31691 292494;292495;292496;292497 231632;231633;231634;231635;231636 231632 1842 4 MFGMVLEK 2 Oxidation (M) 985.46127 0.46127479 1754 P55060 CSE1L Exportin-2 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.61 3.88 8 2 13 3 4 3 1 1 2 2 2 1 2 2 45.344 43.361 2 0.006588 48346 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 62.88 49.892 687050000 270730000 116850000 165900000 7668000 5617000 31861000 14093000 0 0 19311000 0 0 14581000 15400000 25039000 34969 1754 31692 292498;292499;292500;292501;292502;292503;292504;292505;292506;292507;292508;292509;292510;292511;292512;292513;292514;292515;292516;292517;292518;292519;292520 231637;231638;231639;231640;231641;231642;231643;231644;231645;231646;231647;231648;231649;231650;231651;231652;231653;231654;231655 231637 2863;2864 15 MFGMVLEK Oxidation (M) 969.46636 0.46636017 1754 P55060 CSE1L Exportin-2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.89 2.77 5 31 2 2 1 2 2 3 3 2 2 3 3 3 2 3 3 59.538 58.78 2 0.0072484 69608 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 77.923 69.239 677680000 217640000 187850000 28728000 7487700 10939000 42395000 16185000 9698100 6836700 28051000 22789000 24128000 10606000 25499000 38848000 34970 1754 31692 292521;292522;292523;292524;292525;292526;292527;292528;292529;292530;292531;292532;292533;292534;292535;292536;292537;292538;292539;292540;292541;292542;292543;292544;292545;292546;292547;292548;292549;292550;292551;292552;292553;292554;292555;292556 231656;231657;231658;231659;231660;231661;231662;231663;231664;231665;231666;231667;231668;231669;231670;231671;231672;231673;231674;231675;231676 231656 2863;2864 20 MFGMVLEK Unmodified 953.47145 0.47144555 1754 P55060 CSE1L Exportin-2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74.142 73.157 2 0.01951 92938 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.794 65.112 776830000 564740000 65814000 352290 4782400 3130300 26342000 5646100 7835200 4867600 13669000 11428000 11675000 5845100 10680000 40019000 34971 1754 31692 292557;292558;292559;292560;292561;292562;292563;292564;292565;292566;292567;292568;292569;292570;292571 231677;231678;231679;231680;231681;231682;231683 231680 7 MFGSSVDLGNLGQ Unmodified 1323.6129 0.61290107 990 P13861 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit yes yes 0 0 0 By MS/MS By MS/MS 1.5 0.5 1 1 1 1 95.224 95.468 2 4.6093E-17 100228 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 144.12 130.3 214910000 11366000 203540000 0 0 0 0 0 0 0 0 0 0 0 0 0 34972 990 31693 292572;292573 231684;231685 231684 1 MFHGIPATPGIGAPGNKPELYEEVK Acetyl (Protein N-term);Oxidation (M) 2709.3472 0.3472379 4952 Q9UK41 VPS28 Vacuolar protein sorting-associated protein 28 homolog yes yes 1 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 80.931 81.068 3 4.3072E-34 93473 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.819 73.738 145800000 0 0 0 0 0 13123000 0 9925700 5546800 20910000 18948000 18372000 6626100 7060500 45286000 34973 4952 31694 292574;292575;292576;292577;292578;292579;292580;292581;292582 231686;231687;231688;231689;231690;231691;231692;231693 231688 6297 8 MFHGIPATPGIGAPGNKPELYEEVK Acetyl (Protein N-term) 2693.3523 0.35232328 4952 Q9UK41 VPS28 Vacuolar protein sorting-associated protein 28 homolog yes yes 1 0 1 By MS/MS 2 0 1 1 91.291 83.16 3 2.3067E-56 107934 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 99.078 92.574 12320000 12320000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34974 4952 31694 292583 231694;231695 231695 2 MFIGGLSWDTSK Oxidation (M) 1356.6384 0.63838754 236 O14979 HNRNPDL Heterogeneous nuclear ribonucleoprotein D-like yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 78.237 78.483 2 1.6677E-05 90257 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.88 8.3398 15378000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15378000 34975 236 31695 292584;292585 231696;231697 231696 315 2 MFIGGLSWDTSK Unmodified 1340.6435 0.64347291 236 O14979 HNRNPDL Heterogeneous nuclear ribonucleoprotein D-like yes yes 0 0 0 By MS/MS 2 0 1 1 89.443 81.313 2 0.0033675 105706 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.017 73.091 13300000 13300000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34976 236 31695 292586 231698 231698 1 MFIGGLSWDTTK Oxidation (M) 1370.654 0.6540376 2365 Q14103 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.87 3.56 1 2 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 1 78.477 78.923 2 1.7961E-15 99532 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 150.61 142.57 265190000 103510000 0 24173000 5125200 6320900 0 6386500 6988800 9912400 7783000 15482000 26826000 7761100 10459000 34461000 34977 2365 31696 292587;292588;292589;292590;292591;292592;292593;292594;292595;292596;292597;292598;292599;292600;292601 231699;231700;231701;231702;231703;231704;231705;231706;231707;231708;231709;231710;231711;231712 231704 3851 13 MFIGGLSWDTTK Unmodified 1354.6591 0.65912298 2365 Q14103 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.87 3 5 1 1 1 1 1 1 1 1 86.21 84.093 2 2.077E-06 97315 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 113.93 105.39 183490000 67076000 15864000 18972000 0 0 0 0 0 0 0 11503000 13676000 0 10378000 46026000 34978 2365 31696 292602;292603;292604;292605;292606;292607;292608;292609 231713;231714;231715;231716;231717;231718;231719;231720 231714 7 MFILQSK Unmodified 865.47316 0.47316011 446 O60925 PFDN1 Prefoldin subunit 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 59.773 58.058 2 0.023527 65696 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 92.467 43.706 103240000 1779400 0 9905100 0 0 0 0 0 0 0 15776000 18646000 0 15651000 41485000 34979 446 31697 292610;292611;292612;292613;292614;292615 231721;231722;231723;231724;231725 231722 5 MFILQSK Oxidation (M) 881.46807 0.46807473 446 O60925 PFDN1 Prefoldin subunit 1 yes yes 0 1 0 By MS/MS 2 0 1 1 51.498 43.537 2 0.030857 59894 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.244 46.598 14640000 14640000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34980 446 31697 292616 231726 231726 1 MFILSDGEGK Unmodified 1095.527 0.52704617 1346 P35244 RPA3 Replication protein A 14 kDa subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 66.426 64.181 2 0.00012191 82058 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.15 87.684 219780000 17661000 128660000 7086000 3802100 3703700 0 6676600 8347200 0 0 14228000 0 0 0 29612000 34981 1346 31698 292617;292618;292619;292620;292621;292622;292623;292624;292625;292626;292627;292628;292629 231727;231728;231729;231730;231731;231732;231733;231734;231735;231736;231737;231738;231739;231740 231729 14 MFILSDGEGK Oxidation (M) 1111.522 0.52196079 1346 P35244 RPA3 Replication protein A 14 kDa subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 4.25 3.34 2 1 1 1 1 1 1 54.239 49.843 2 0.004218 61948 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 87.639 27.62 35103000 0 22835000 12268000 0 0 0 0 0 0 0 0 0 0 0 0 34982 1346 31698 292630;292631;292632;292633 231741;231742;231743;231744 231742 2046 4 MFIQQEFK Unmodified 1069.5267 0.52665224 3802 Q96DX7 TRIM44 Tripartite motif-containing protein 44 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 70.333 64.517 2 0.022229 81974 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.753 54.336 25294000 0 25294000 0 0 0 0 0 0 0 0 0 0 0 0 0 34983 3802 31699 292634;292635 231745;231746 231745 2 MFKPQALLDK Unmodified 1189.6529 0.65291539 3735 Q96AC1 FERMT2 Fermitin family homolog 2 yes yes 0 0 1 By MS/MS 2 0 1 1 75.812 67.681 3 0.020224 89217 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.198 42.151 19430000 19430000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34984 3735 31700 292636 231747 231747 1 MFLGDAVDVFETR Oxidation (M) 1514.7075 0.70752973 4192 Q9BVL2 NUPL1 Nucleoporin p58/p45 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 86.037 86.161 2 0.00087995 99711 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 84.658 74.971 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34985 4192 31701 292637;292638;292639;292640;292641 231748;231749;231750;231751;231752 231749 5672 5 MFLPQVIK Unmodified 974.56231 0.56230947 4049 Q99707 MTR Methionine synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 85.309 80.186 2 0.024349 102286 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.381 33.638 38931000 22581000 13541000 2809200 0 0 0 0 0 0 0 0 0 0 0 0 34986 4049 31702 292642;292643;292644 231753;231754 231754 2 MFLSFPTTK Oxidation (M) 1086.542 0.54196796 55;1969 CON__P01966;P69905 HBA1 Hemoglobin subunit alpha no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.969 74.03 2 0.0021541 84623 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.162 66.2 + 170340000 0 0 0 22021000 9210800 15257000 12108000 18860000 9875100 12744000 13926000 17887000 12659000 10212000 15583000 34987 55;1969 31703 292645;292646;292647;292648;292649;292650;292651;292652;292653;292654;292655;292656 231755;231756;231757;231758;231759;231760;231761;231762;231763;231764;231765;231766 231758 53 12 MFLSFPTTK Unmodified 1070.5471 0.54705333 55;1969 CON__P01966;P69905 HBA1 Hemoglobin subunit alpha no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 80.134 80.18 2 0.00355 91860 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 89.698 74.062 + 105410000 0 0 0 8988300 5233600 8007600 7287000 0 5992100 9635800 10278000 12585000 8772200 8851800 19781000 34988 55;1969 31703 292657;292658;292659;292660;292661;292662;292663;292664;292665;292666;292667 231767;231768;231769;231770;231771;231772;231773;231774;231775 231771 9 MFLSGLS Oxidation (M) 769.36803 0.36802634 1636 P50748 KNTC1 Kinetochore-associated protein 1 yes yes 0 1 0 By MS/MS 2 0 1 1 73.092 67.547 1 0.013592 85275 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.609 84.609 19946000 0 19946000 0 0 0 0 0 0 0 0 0 0 0 0 0 34989 1636 31704 292668 231776 231776 2627 0 MFLVNSFLK Acetyl (Protein N-term);Oxidation (M) 1155.5998 0.59981719 784 P04632 CAPNS1 Calpain small subunit 1 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.42 3.09 3 2 19 2 2 1 2 2 2 1 1 2 1 1 1 2 2 2 98.319 97.45 2 0.00045335 113998 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 94.302 76.917 303600000 16713000 41131000 1012700 4758600 13815000 15366000 8883300 15325000 16210000 23410000 19247000 14122000 13973000 19185000 80449000 34990 784 31705 292669;292670;292671;292672;292673;292674;292675;292676;292677;292678;292679;292680;292681;292682;292683;292684;292685;292686;292687;292688;292689;292690;292691;292692 231777;231778;231779;231780;231781;231782;231783;231784;231785;231786;231787;231788;231789;231790;231791;231792;231793;231794;231795;231796 231791 949 18 MFLVNSFLK Acetyl (Protein N-term) 1139.6049 0.60490256 784 P04632 CAPNS1 Calpain small subunit 1 yes yes 1 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 104.23 98.728 2 0.0061708 123419 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.825 59.357 13903000 7723500 6179700 0 0 0 0 0 0 0 0 0 0 0 0 0 34991 784 31705 292693;292694;292695 231797;231798 231797 2 MFNAENGK Unmodified 909.40145 0.40145173 1392 P37837 TALDO1 Transaldolase yes yes 0 0 0 By MS/MS 2 0 1 1 19.761 16.186 2 0.046168 21132 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.081 53.545 69471000 0 69471000 0 0 0 0 0 0 0 0 0 0 0 0 0 34992 1392 31706 292696 231799 231799 1 MFNAENGK Oxidation (M) 925.39637 0.39636635 1392 P37837 TALDO1 Transaldolase yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 9.1862 9.484 2 0.016688 7284 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.782 37.922 6684500 0 0 0 0 0 0 0 0 0 0 0 0 0 1817000 4867500 34993 1392 31706 292697;292698 231800 231800 2159 1 MFPFIMEGTK Unmodified 1199.5719 0.57188788 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 0 By MS/MS 10 0 1 1 86.879 87.038 2 0.042395 100618 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.305 30.964 2810100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2810100 34994 2361 31707 292699 231801 231801 1 MFPFIMEGTK 2 Oxidation (M) 1231.5617 0.56171712 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 74.309 74.317 2 0.011063 85227 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 41.876 37.264 35600000 0 0 0 2515900 3068000 4234200 0 0 3632500 5260900 0 8788400 0 4164900 3934700 34995 2361 31707 292700;292701;292702;292703;292704;292705;292706;292707 231802 231802 3845;3846 1 MFPFIMEGTK Oxidation (M) 1215.5668 0.5668025 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 1 0 By MS/MS 2 0 1 1 88.908 80.777 2 0.036086 104880 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.436 48.655 4975900 4975900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34996 2361 31707 292708 231803 231803 3845;3846 1 MFQDIGVSK Oxidation (M) 1039.5008 0.50083142 2328 Q13616 CUL1 Cullin-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 40.118 40.377 2 0.014983 44684 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 51.346 21.97 30085000 0 0 0 2799700 0 7770800 3798300 0 0 0 4925400 4865500 0 0 5925300 34997 2328 31708 292709;292710;292711;292712;292713;292714 231804;231805;231806 231806 3793 3 MFQDIGVSK Unmodified 1023.5059 0.5059168 2328 Q13616 CUL1 Cullin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 56.252 50.437 2 0.0085907 65195 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.698 55.96 20840000 0 20840000 0 0 0 0 0 0 0 0 0 0 0 0 0 34998 2328 31708 292715;292716;292717;292718;292719 231807;231808;231809;231810;231811 231808 5 MFQVPDSEGGR Acetyl (Protein N-term);Oxidation (M) 1279.5503 0.55030081 4460 Q9H910 HN1L Hematological and neurological expressed 1-like protein yes yes 1 1 0 By MS/MS 10 0 1 1 60.351 60.937 2 0.0028028 68518 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.336 36.031 6481400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6481400 34999 4460 31709 292720 231812 231812 5900 1 MFSEADACELWIDEK Oxidation (M) 1858.7754 0.7753513 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 1 0 By MS/MS 2 0 1 1 84.26 79.517 2 5.9884E-38 98834 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.38 112.77 36721000 0 36721000 0 0 0 0 0 0 0 0 0 0 0 0 0 35000 2047 31710 292721 231813 231813 3326 1 MFSEADACELWIDEK Unmodified 1842.7804 0.78043668 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 87.928 81.442 2 0.0008752 103067 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.09 97.656 62187000 6491800 55695000 0 0 0 0 0 0 0 0 0 0 0 0 0 35001 2047 31710 292722;292723 231814;231815 231814 2 MFSEQAAQR Acetyl (Protein N-term) 1108.4971 0.49714303 1556 P49005 POLD2 DNA polymerase delta subunit 2 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 53.668 54.06 2 0.0021791 60338 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.255 65.392 32051000 0 0 0 0 0 0 0 0 0 5408700 5427600 5292700 4730300 3443500 7748100 35002 1556 31711 292724;292725;292726;292727;292728;292729 231816;231817;231818;231819;231820 231817 5 MFSFEGDFK Acetyl (Protein N-term) 1148.4848 0.48484701 2525 Q15386 UBE3C Ubiquitin-protein ligase E3C yes yes 1 0 0 By MS/MS 2 0 1 1 96.236 91.415 2 0.003779 113223 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.438 70.85 35911000 0 35911000 0 0 0 0 0 0 0 0 0 0 0 0 0 35003 2525 31712 292730 231821 231821 1 MFSFNMFDHPIPR Acetyl (Protein N-term);2 Oxidation (M) 1711.7487 0.74868304 3681 Q92890 UFD1L Ubiquitin fusion degradation protein 1 homolog yes yes 1 2 0 By MS/MS 10 0 1 1 84.887 85.066 2 0.0004055 98252 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.597 49.743 4197300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4197300 35004 3681 31713 292731 231822 231822 5232;5233 1 MFSSSAK Acetyl (Protein N-term);Oxidation (M) 814.3531 0.35310455 1871 P62081 RPS7 40S ribosomal protein S7 yes yes 1 1 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 21.525 21.783 1 0.0056236 22534 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 60.76 39.213 53030000 0 0 0 0 3524700 5381800 0 0 0 7550300 0 11732000 9597100 6927700 8316100 35005 1871 31714 292732;292733;292734;292735;292736;292737;292738 231823;231824;231825;231826;231827 231827 3029 4 MFSSSAK Acetyl (Protein N-term) 798.35819 0.35818993 1871 P62081 RPS7 40S ribosomal protein S7 yes yes 1 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS 8.33 3.34 1 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 46.582 46.265 1;2 0.0086001 45751 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 64.757 49.121 236140000 50153000 31507000 0 7267300 6808100 8062900 8127400 8214800 6646400 12859000 18391000 21550000 13625000 17280000 25647000 35006 1871 31714 292739;292740;292741;292742;292743;292744;292745;292746;292747;292748;292749;292750;292751;292752;292753 231828;231829;231830;231831;231832 231831 3 MFSWVSK Acetyl (Protein N-term) 925.43677 0.4367746 4403 Q9H4M9 EHD1 EH domain-containing protein 1 yes yes 1 0 0 By MS/MS 2 0 1 1 94.065 89.169 2 0.031555 110661 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 53.679 38.043 17340000 0 17340000 0 0 0 0 0 0 0 0 0 0 0 0 0 35007 4403 31715 292754 231833 231833 1 MFTASSGIK Oxidation (M) 956.46372 0.46371763 4897 Q9UHD2 TBK1 Serine/threonine-protein kinase TBK1 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 32.717 28.778 2 0.021197 37832 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.379 37.688 20400000 0 17672000 2728200 0 0 0 0 0 0 0 0 0 0 0 0 35008 4897 31716 292755;292756 231834 231834 1 MFTASSGIK Unmodified 940.4688 0.46880301 4897 Q9UHD2 TBK1 Serine/threonine-protein kinase TBK1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 44.149 38.143 2 0.016914 52082 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.474 52.157 139700000 62070000 77631000 0 0 0 0 0 0 0 0 0 0 0 0 0 35009 4897 31716 292757;292758 231835;231836 231836 2 MFTILER Oxidation (M) 924.47389 0.47388839 419 O60645 EXOC3 Exocyst complex component 3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 60.254 60.471 2 0.02617 69104 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 68.915 23.942 26028000 0 0 0 0 0 4203400 3430600 2637500 0 4007700 3754600 4454200 3540000 0 0 35010 419 31717 292759;292760;292761;292762;292763;292764;292765 231837;231838;231839;231840 231840 4 MFTILER Unmodified 908.47897 0.47897377 419 O60645 EXOC3 Exocyst complex component 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 71.635 71.797 2 0.024035 82336 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 83.614 39.003 27472000 0 0 0 0 0 3449500 3231500 3375300 0 3567200 3672300 3844600 3420600 2911000 0 35011 419 31717 292766;292767;292768;292769;292770;292771;292772;292773 231841;231842;231843;231844 231844 4 MFTSMDPPPVELIR 2 Oxidation (M) 1663.795 0.79496453 3258 Q8IXH7 NELFCD Negative elongation factor C/D yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 77.751 77.707 2 0.00034672 90077 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 61.353 49.14 18768000 0 0 0 0 4167500 0 0 0 0 8970100 0 0 5630500 0 0 35012 3258 31718 292774;292775;292776;292777 231845;231846;231847;231848 231847 4875;4876 4 MFVEEVSTGQECGVVLDK Oxidation (M) 2041.9336 0.93364286 1578 P49588 AARS Alanine--tRNA ligase, cytoplasmic yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 5.58 3.75 4 3 5 2 4 1 1 2 1 1 72.898 69.958 2;3 7.9281E-96 87326 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 201.95 149.96 535270000 32837000 472520000 9356900 0 0 0 0 0 0 2989500 4237100 5094700 0 0 8238400 35013 1578 31719 292778;292779;292780;292781;292782;292783;292784;292785;292786;292787;292788;292789 231849;231850;231851;231852;231853;231854;231855;231856 231849 2535 7 MFVEEVSTGQECGVVLDK Unmodified 2025.9387 0.93872824 1578 P49588 AARS Alanine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 4.57 3.46 3 2 2 1 3 1 1 1 78.37 75.267 2;3 2.4878E-87 93460 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 239.19 226.42 365800000 113790000 214170000 23982000 0 0 0 0 0 0 0 2367000 0 0 0 11495000 35014 1578 31719 292790;292791;292792;292793;292794;292795;292796 231857;231858;231859;231860;231861;231862;231863;231864;231865 231857 9 MFVGGLSWDTSK Oxidation (M) 1342.6227 0.62273747 4056 Q99729 HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B yes yes 0 1 0 By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS 6.57 3.96 3 4 1 1 1 1 1 1 1 75.534 73.448 2 1.2221E-13 93499 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 132.78 99.939 109590000 51857000 23869000 10232000 0 0 0 0 0 0 0 5074200 5602300 0 5351400 7605900 35015 4056 31720 292797;292798;292799;292800;292801;292802;292803 231866;231867;231868;231869 231867 5555 4 MFVGQVPR Unmodified 932.49021 0.49020716 3677 Q92879 CELF1 CUGBP Elav-like family member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 50.618 50.771 2 0.0040144 56169 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 146.21 120.1 664380000 0 0 0 29759000 37940000 40996000 43530000 49524000 37013000 57497000 65402000 61100000 77691000 54530000 109400000 35016 3677 31721 292804;292805;292806;292807;292808;292809;292810;292811;292812;292813;292814;292815 231870;231871;231872;231873;231874;231875;231876;231877;231878;231879;231880;231881;231882;231883;231884;231885;231886;231887;231888;231889;231890;231891;231892;231893 231876 24 MFVGQVPR Oxidation (M) 948.48512 0.48512178 3677 Q92879 CELF1 CUGBP Elav-like family member 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 2 2 2 2 1 2 1 1 1 1 1 39.752 39.679 2 0.0032833 43748 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 133.95 108.39 263180000 0 0 0 38463000 35917000 23451000 30026000 25655000 49788000 25772000 0 0 34110000 0 0 35017 3677 31721 292816;292817;292818;292819;292820;292821;292822;292823;292824;292825;292826;292827;292828;292829;292830;292831 231894;231895;231896;231897;231898;231899;231900;231901;231902;231903;231904 231901 5226 11 MFVLDEADEMLSR 2 Oxidation (M) 1586.6956 0.69564442 1816;2396 P60842;Q14240 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed no no 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.03 3.41 7 1 24 3 3 2 2 2 2 2 2 2 2 2 2 2 2 2 73.846 73.053 2 3.7114E-13 84084 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 128.01 98.271 1594900000 12445000 63887000 17002000 64759000 58328000 246380000 81996000 67918000 72998000 211260000 149680000 135300000 94677000 104890000 213340000 35018 1816;2396 31722 292832;292833;292834;292835;292836;292837;292838;292839;292840;292841;292842;292843;292844;292845;292846;292847;292848;292849;292850;292851;292852;292853;292854;292855;292856;292857;292858;292859;292860;292861;292862;292863 231905;231906;231907;231908;231909;231910;231911;231912;231913;231914;231915;231916;231917;231918;231919;231920;231921;231922;231923;231924;231925;231926;231927;231928;231929;231930;231931;231932;231933;231934;231935;231936 231921 2954;2955 29 MFVLDEADEMLSR Oxidation (M) 1570.7007 0.7007298 1816;2396 P60842;Q14240 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.82 2.8 4 1 28 3 2 2 3 2 2 2 3 3 3 2 3 3 81.984 81.538 2 2.2891E-41 103997 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 192.38 183.42 540580000 0 207070000 9515800 0 3682300 36328000 9917100 13994000 9389900 42900000 33396000 34189000 12717000 25447000 102040000 35019 1816;2396 31722 292864;292865;292866;292867;292868;292869;292870;292871;292872;292873;292874;292875;292876;292877;292878;292879;292880;292881;292882;292883;292884;292885;292886;292887;292888;292889;292890;292891;292892;292893;292894;292895;292896 231937;231938;231939;231940;231941;231942;231943;231944;231945;231946;231947;231948;231949;231950;231951;231952;231953;231954;231955;231956;231957;231958;231959;231960;231961;231962;231963;231964;231965;231966;231967;231968 231945 2954;2955 25 MFVLDEADEMLSR Unmodified 1554.7058 0.70581517 1816;2396 P60842;Q14240 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed no no 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 2 2 1 93.121 87.749 2;3 6.9651E-07 110892 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.35 99.375 130400000 57633000 70888000 1877600 0 0 0 0 0 0 0 0 0 0 0 0 35020 1816;2396 31722 292897;292898;292899;292900;292901 231969;231970;231971;231972;231973;231974;231975 231969 7 MFVLDEADEMLSRGFK 2 Oxidation (M) 1918.8805 0.88048508 1816;2396 P60842;Q14240 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed no no 0 2 1 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 2 3 2 83.762 78.905 3 0.000332 96967 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 71.08 64.352 431650000 271830000 119120000 40696000 0 0 0 0 0 0 0 0 0 0 0 0 35021 1816;2396 31723 292902;292903;292904;292905;292906;292907;292908 231976;231977;231978;231979;231980;231981 231981 2954;2955 5 MFVLDEADEMLSRGFK Oxidation (M) 1902.8856 0.88557045 1816;2396 P60842;Q14240 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed no no 0 1 1 By MS/MS By MS/MS 2.22 0.416 7 2 5 4 93.066 87.093 2;3 1.6351E-38 111776 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 133.66 127.76 410550000 293840000 116720000 0 0 0 0 0 0 0 0 0 0 0 0 0 35022 1816;2396 31723 292909;292910;292911;292912;292913;292914;292915;292916;292917 231982;231983;231984;231985;231986;231987;231988;231989 231988 2954;2955 7 MFVLDEADEMLSRGFK Unmodified 1886.8907 0.89065583 1816;2396 P60842;Q14240 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed no no 0 0 1 By MS/MS By MS/MS By MS/MS 2.12 0.599 1 5 2 4 3 1 98.498 94.776 3;4 1.9805E-42 115597 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 128.06 125.89 602540000 456550000 144110000 1871400 0 0 0 0 0 0 0 0 0 0 0 0 35023 1816;2396 31723 292918;292919;292920;292921;292922;292923;292924;292925 231990;231991;231992;231993;231994;231995;231996;231997;231998 231997 9 MFVSSSGLPPSPVPSPR Oxidation (M) 1756.8818 0.8818057 3077 Q7Z309 FAM122B Protein FAM122B yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 15 1 1 1 2 1 1 2 2 2 1 1 73.341 73.421 2 6.5692E-14 84753 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 95.018 77.993 130080000 0 0 0 7146400 12187000 1844500 11746000 8621400 0 12299000 26913000 17684000 11937000 8493700 11205000 35024 3077 31724 292926;292927;292928;292929;292930;292931;292932;292933;292934;292935;292936;292937;292938;292939;292940 231999;232000;232001;232002;232003;232004;232005;232006;232007;232008;232009;232010;232011;232012 232010 4692 14 MFVSSSGLPPSPVPSPR Unmodified 1740.8869 0.88689108 3077 Q7Z309 FAM122B Protein FAM122B yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 77.873 77.974 2 0.0024833 89182 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 44.299 40.797 30894000 0 0 0 0 2230100 0 2039800 4687700 0 2951200 4305300 0 3614200 3714100 7351500 35025 3077 31724 292941;292942;292943;292944;292945;292946;292947;292948 232013;232014;232015;232016;232017 232017 3 MFYSFQDK Unmodified 1064.4637 0.46371763 2507;5101 Q9Y2H1;Q15208 STK38L;STK38 Serine/threonine-protein kinase 38-like;Serine/threonine-protein kinase 38 no no 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 65.211 59.22 2 0.010922 79044 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 111.01 88.117 73911000 39626000 27791000 6493700 0 0 0 0 0 0 0 0 0 0 0 0 35026 5101;2507 31725 292949;292950;292951 232018;232019;232020 232020 3 MFYSFQDK Oxidation (M) 1080.4586 0.45863226 2507;5101 Q9Y2H1;Q15208 STK38L;STK38 Serine/threonine-protein kinase 38-like;Serine/threonine-protein kinase 38 no no 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 5 2 1 2 54.655 48.66 2 0.024384 66674 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.923 56.622 41873000 16453000 15536000 9883800 0 0 0 0 0 0 0 0 0 0 0 0 35027 5101;2507 31725 292952;292953;292954;292955;292956 232021;232022;232023 232022 3 MGAGLGHGMDR 2 Oxidation (M) 1132.4754 0.47536173 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 6.9526 7.0815 2 0.001397 4929 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 61.78 57.845 54830000 0 0 0 0 0 10460000 0 0 12307000 15752000 0 0 16312000 0 0 35028 1681 31726 292957;292958;292959;292960 232024;232025;232026;232027 232025 2701;2702 4 MGAGLGHGMDR Oxidation (M) 1116.4804 0.48044711 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 1 2 2 2 2 2 2 1 1 2 1 13.987 14.148 2 0.00069605 12240 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 75.378 56.648 105690000 0 0 0 5061600 4763900 7947300 8359400 7935100 7188200 13840000 12762000 9218800 8315100 12856000 7444600 35029 1681 31726 292961;292962;292963;292964;292965;292966;292967;292968;292969;292970;292971;292972;292973;292974;292975;292976;292977;292978;292979 232028;232029;232030;232031;232032;232033;232034;232035;232036;232037;232038;232039;232040;232041;232042 232041 2701;2702 13 MGAGLGHGMDR Unmodified 1100.4855 0.48553248 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.411 24.614 2 0.0021805 25173 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 68.893 48.334 129100000 0 0 0 4947500 8644300 7599800 6297800 9649700 6165700 10194000 10354000 14478000 16340000 11313000 23115000 35030 1681 31726 292980;292981;292982;292983;292984;292985;292986;292987;292988;292989;292990;292991 232043;232044;232045;232046;232047;232048;232049;232050;232051;232052;232053 232051 9 MGAGMGFGLER 2 Oxidation (M) 1156.5005 0.50051385 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 41.938 42.195 2 0.00020204 46952 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 79.148 49.999 371060000 0 0 0 0 0 46008000 49564000 39564000 0 54631000 0 0 85514000 44745000 51034000 35031 1681 31727 292992;292993;292994;292995;292996;292997;292998 232054;232055;232056;232057;232058;232059;232060;232061 232055 2703;2704 7 MGAGMGFGLER Oxidation (M) 1140.5056 0.50559922 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 2 1 1 1 1 1 1 2 2 2 2 54.914 55.031 2 0.00031002 64074 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 84.213 68.551 353080000 0 0 0 33492000 11816000 14852000 13343000 17818000 10499000 15041000 53368000 0 58425000 55451000 68977000 35032 1681 31727 292999;293000;293001;293002;293003;293004;293005;293006;293007;293008;293009;293010;293011;293012;293013;293014 232062;232063;232064;232065;232066;232067;232068;232069;232070;232071;232072;232073;232074;232075;232076;232077;232078;232079;232080;232081;232082 232078 2703;2704 21 MGAGMGFGLER Unmodified 1124.5107 0.5106846 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 2 1 1 1 1 1 1 1 65.777 65.719 2 0.001123 74152 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.92 62.873 185800000 0 0 0 7701300 17901000 24785000 0 0 0 0 0 0 26559000 37026000 71828000 35033 1681 31727 293015;293016;293017;293018;293019;293020;293021;293022;293023;293024;293025;293026;293027 232083;232084;232085;232086;232087;232088;232089;232090;232091;232092;232093;232094;232095;232096;232097;232098;232099;232100 232087 18 MGAMAKPDCIITCDGK 2 Oxidation (M) 1798.7722 0.77219695 2054 Q01469 FABP5 Fatty acid-binding protein, epidermal yes yes 0 2 1 By MS/MS 10 0 1 1 36.756 36.287 3 0.0004972 40443 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 54.281 52.963 49883000 0 0 0 49883000 0 0 0 0 0 0 0 0 0 0 0 35034 2054 31728 293028 232101 232101 3338;3339 1 MGAMAKPDCIITCDGK Oxidation (M) 1782.7773 0.77728233 2054 Q01469 FABP5 Fatty acid-binding protein, epidermal yes yes 0 1 1 By MS/MS 10 0 1 1 42.829 42.301 3 0.0016457 47713 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 42.788 37.983 41756000 0 0 0 41756000 0 0 0 0 0 0 0 0 0 0 0 35035 2054 31728 293029 232102 232102 3338;3339 1 MGANNLER Unmodified 903.42325 0.4232498 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.742 18.939 2 0.0043249 18198 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 111.82 75.421 1311500000 0 0 0 75230000 76996000 88197000 88805000 97948000 100480000 116720000 110140000 145090000 133500000 101680000 176760000 35036 1681 31729 293030;293031;293032;293033;293034;293035;293036;293037;293038;293039;293040;293041 232103;232104;232105;232106;232107;232108;232109;232110;232111;232112;232113;232114 232106 9 MGANNLER Oxidation (M) 919.41816 0.41816443 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 2 2 1 1 2 1 8.7954 8.9527 2 0.0028491 7239 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 111.82 80.587 425470000 0 0 0 27266000 26694000 21637000 31510000 23007000 24855000 0 84920000 57543000 50825000 35194000 42018000 35037 1681 31729 293042;293043;293044;293045;293046;293047;293048;293049;293050;293051;293052;293053;293054;293055 232115;232116;232117;232118;232119;232120;232121;232122;232123;232124;232125;232126 232124 2705 9 MGANSLER Oxidation (M) 892.40727 0.40726539 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 2 1 1 1 1 1 9.912 10.054 2 0.0028491 7672 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 113.89 81.419 753680000 0 0 0 44159000 38819000 48474000 63951000 53269000 44453000 66386000 83909000 99966000 82137000 62805000 65350000 35038 1681 31730 293056;293057;293058;293059;293060;293061;293062;293063;293064;293065;293066;293067;293068 232127;232128;232129;232130;232131;232132;232133;232134;232135;232136;232137;232138;232139;232140;232141;232142 232134 2706 14 MGANSLER Unmodified 876.41235 0.41235077 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 20.249 20.508 2 0.00017204 21220 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 154.35 109.74 3561500000 0 0 0 0 287450000 234320000 0 315890000 205330000 330150000 399060000 483210000 421890000 369310000 514860000 35039 1681 31730 293069;293070;293071;293072;293073;293074;293075;293076;293077;293078;293079 232143;232144;232145;232146;232147;232148;232149;232150;232151;232152;232153 232150 10 MGAPESGLAEYLFDK Oxidation (M) 1642.7549 0.75487386 766 P02794 FTH1 Ferritin heavy chain;Ferritin heavy chain, N-terminally processed yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.21 3.75 4 1 9 1 2 2 1 1 1 1 1 1 1 1 1 86.568 85.309 2 7.2183E-38 106435 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 135.6 117.79 963940000 122310000 663520000 80294000 0 3524200 0 0 4610700 6998900 9247300 12676000 14506000 4350300 8913500 32985000 35040 766 31731 293080;293081;293082;293083;293084;293085;293086;293087;293088;293089;293090;293091;293092;293093 232154;232155;232156;232157;232158;232159;232160;232161;232162;232163;232164;232165;232166;232167 232155 920 14 MGAPESGLAEYLFDK Unmodified 1626.76 0.75995923 766 P02794 FTH1 Ferritin heavy chain;Ferritin heavy chain, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 4.83 3.67 3 1 2 1 2 1 1 1 90.807 87.74 2 8.3079E-38 109835 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 135.6 109.48 1111300000 146650000 918160000 33845000 0 0 0 528710 0 0 0 0 0 0 0 12088000 35041 766 31731 293094;293095;293096;293097;293098;293099 232168;232169;232170;232171;232172;232173 232168 6 MGDEGGESELLGEDLPLEPSVTK Oxidation (M) 2417.1156 0.11556621 391 O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes yes 0 1 0 By MS/MS 10 0 1 1 84.734 84.871 2 2.9899E-07 98548 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.173 52.611 3734700 0 0 0 0 0 0 0 0 0 0 0 3734700 0 0 0 35042 391 31732 293100 232174 232174 496 1 MGDNNVIESK Oxidation (M) 1121.5023 0.50228799 146 O00399 DCTN6 Dynactin subunit 6 yes yes 0 1 0 By MS/MS 2 0 2 2 16.913 13.493 2 0.014437 17913 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.029 64.106 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35043 146 31733 293101;293102 232175;232176 232176 195 2 MGDNNVIESK Unmodified 1105.5074 0.50737336 146 O00399 DCTN6 Dynactin subunit 6 yes yes 0 0 0 By MS/MS 2 0 1 1 26.869 22.609 2 0.00014261 30056 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 150.27 112.13 83365000 0 83365000 0 0 0 0 0 0 0 0 0 0 0 0 0 35044 146 31733 293103 232177 232177 0 MGEEVIPLR Unmodified 1042.5481 0.54811597 2684 Q4G0J3 LARP7 La-related protein 7 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 63.94 64.046 2 0.0036487 72421 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 95.531 39.409 56810000 0 0 0 3777200 0 5849500 0 0 4241400 4629100 9422700 0 9145000 7818800 11926000 35045 2684 31734 293104;293105;293106;293107;293108;293109;293110;293111;293112 232178;232179;232180;232181;232182 232180 5 MGEEVIPLRVLSK Unmodified 1469.8276 0.82758529 2684 Q4G0J3 LARP7 La-related protein 7 yes yes 0 0 1 By MS/MS 2 0 1 1 86.022 77.892 3 0.0036723 101549 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.528 62.528 45563000 45563000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35046 2684 31735 293113 232183 232183 1 MGELASESQGSK Oxidation (M) 1238.5449 0.54488108 5070 Q9UQB8 BAIAP2 Brain-specific angiogenesis inhibitor 1-associated protein 2 yes yes 0 1 0 By MS/MS By MS/MS By matching 7.33 3.77 1 2 1 1 1 10.538 10.803 2 0.0085018 9630 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 44.309 29.643 3667400 0 0 0 0 0 0 0 0 0 1683600 0 0 0 0 1983800 35047 5070 31736 293114;293115;293116 232184;232185 232184 6440 2 MGELASESQGSK Unmodified 1222.55 0.54996646 5070 Q9UQB8 BAIAP2 Brain-specific angiogenesis inhibitor 1-associated protein 2 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching 9 2.65 1 7 1 1 1 1 1 1 1 1 19.264 18.997 2 1.6829E-09 23240 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.9 99.939 41430000 0 26008000 0 2238900 0 0 1233500 2103700 0 2105600 2379400 0 0 1485000 3876000 35048 5070 31736 293117;293118;293119;293120;293121;293122;293123;293124 232186;232187;232188 232187 3 MGEPSQDPK Unmodified 987.43315 0.43314579 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 10.731 10.872 2 0.042904 9798 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 43.808 31.903 15149000 0 0 0 0 834200 1254900 1370200 1367700 1033200 1402900 0 2311900 1583300 2005800 1984600 35049 645 31737 293125;293126;293127;293128;293129;293130;293131;293132;293133;293134 232189;232190 232189 2 MGESDDSILR Oxidation (M) 1137.4972 0.49720261 1948 P63220 RPS21 40S ribosomal protein S21 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 32.586 32.86 2 0.001957 34808 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.264 70.784 40851000 0 0 0 0 2075800 0 4278800 0 0 0 0 9845200 0 9184000 15467000 35050 1948 31738 293135;293136;293137;293138;293139 232191;232192;232193;232194 232191 3127 4 MGESDDSILR Unmodified 1121.5023 0.50228798 1948 P63220 RPS21 40S ribosomal protein S21 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 41.804 42.106 2 0.011712 47973 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 53.756 39.599 101930000 0 0 0 3676800 0 0 3126800 0 0 0 17721000 18111000 6082600 16141000 37070000 35051 1948 31738 293140;293141;293142;293143;293144;293145;293146 232195;232196;232197 232197 3 MGFEPLAYR Oxidation (M) 1098.5168 0.51681584 1323 P32754 HPD 4-hydroxyphenylpyruvate dioxygenase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 63.112 63.507 2 0.0024198 71574 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 111.01 86.064 106110000 0 0 0 0 0 0 0 0 0 0 20238000 21600000 0 16745000 47530000 35052 1323 31739 293147;293148;293149;293150;293151 232198;232199;232200;232201;232202 232198 1970 5 MGFEPLAYR Unmodified 1082.5219 0.52190122 1323 P32754 HPD 4-hydroxyphenylpyruvate dioxygenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 73.019 73.225 2 0.0074164 83829 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.485 57.334 236860000 0 0 0 0 0 0 0 7922200 0 9293500 37882000 31440000 5343500 33929000 111050000 35053 1323 31739 293152;293153;293154;293155;293156;293157;293158 232203;232204;232205;232206;232207;232208;232209 232203 6 MGFGGTLEIK Oxidation (M) 1067.5321 0.53213155 2536 Q15436 SEC23A Protein transport protein Sec23A yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 66.67 61.836 2 0.012438 79071 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.716 49.091 29205000 0 24326000 4879800 0 0 0 0 0 0 0 0 0 0 0 0 35054 2536 31740 293159;293160 232210 232210 4172 1 MGFGGTLEIK Unmodified 1051.5372 0.53721693 2536 Q15436 SEC23A Protein transport protein Sec23A yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 79.037 72.604 2 0.0030212 93820 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.582 73.132 50923000 22159000 28765000 0 0 0 0 0 0 0 0 0 0 0 0 0 35055 2536 31740 293161;293162 232211;232212 232212 2 MGFGNLNK Unmodified 879.42727 0.42727255 397 O60341 KDM1A Lysine-specific histone demethylase 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.649 43.824 2 0.015124 47915 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 69.383 46.761 248920000 0 0 0 15827000 13330000 19654000 10659000 15717000 11604000 23594000 21774000 22454000 25709000 24773000 43822000 35056 397 31741 293163;293164;293165;293166;293167;293168;293169;293170;293171;293172;293173;293174 232213;232214;232215 232215 3 MGFTEVTPVTGASLRR Unmodified 1720.893 0.89303909 1766 P55265 ADAR Double-stranded RNA-specific adenosine deaminase yes yes 0 0 1 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 70.17 70.37 3 0.00011977 80179 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.777 48.062 25380000 0 0 0 0 0 1921600 0 2348100 0 2989100 0 4567000 2898200 2538100 8117900 35057 1766 31742 293175;293176;293177;293178;293179;293180;293181 232216;232217 232217 2 MGFTEVTPVTGASLRR Oxidation (M) 1736.888 0.88795372 1766 P55265 ADAR Double-stranded RNA-specific adenosine deaminase yes yes 0 1 1 By MS/MS By MS/MS By matching 10 0 3 1 1 1 62.003 62.22 3 0.0014965 71065 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 40.801 29.687 15826000 0 0 0 0 0 0 6379000 0 3459000 0 5988500 0 0 0 0 35058 1766 31742 293182;293183;293184 232218 232218 2883 1 MGGAMAPPMK Unmodified 989.44966 0.44966425 4814 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 39.005 39.372 2 0.017204 43164 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 49.097 38.028 41047000 0 0 0 0 0 0 2679700 0 2416900 4560000 6771700 8136900 4486800 4483800 7511600 35059 4814 31743 293185;293186;293187;293188;293189;293190;293191;293192 232219;232220;232221;232222;232223 232223 5 MGGATSRGENSYGLDITCK Unmodified 2015.9041 0.90407406 2302 Q13496 MTM1 Myotubularin yes yes 0 0 1 By MS/MS 2 0 1 1 59.927 51.701 3 0.0015551 70190 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.608 34.329 9801900 9801900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35060 2302 31744 293193 232224;232225 232224 2 MGGEAPELALDPVPQDASTK Oxidation (M) 2040.9674 0.96738583 2140 Q07812 BAX Apoptosis regulator BAX yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 74.305 74.355 2 1.4042E-47 85738 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 116.84 107.55 84873000 0 0 0 5315000 5033800 9296600 6258500 0 3986500 8924000 10542000 9652000 6930200 7474300 11460000 35061 2140 31745 293194;293195;293196;293197;293198;293199;293200;293201;293202;293203;293204 232226;232227;232228;232229;232230;232231;232232;232233;232234;232235;232236 232234 3444 11 MGGEAPELALDPVPQDASTK Unmodified 2024.9725 0.97247121 2140 Q07812 BAX Apoptosis regulator BAX yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 77.179 77.235 2 7.4383E-15 88734 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.22 99.606 50692000 0 0 0 2996700 0 9825800 0 0 3218400 0 0 8881000 5542700 7116600 13110000 35062 2140 31745 293205;293206;293207;293208;293209;293210;293211 232237;232238;232239;232240;232241;232242;232243;232244;232245 232239 9 MGGEEAEIR Oxidation (M) 1006.439 0.43895945 2152 Q08211 DHX9 ATP-dependent RNA helicase A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.783 14.953 2 0.0059303 14633 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 67.993 32.499 85654000 0 0 0 8304500 4997900 6170300 4568100 3741500 3815400 6812000 9190100 8489800 11406000 7626200 10533000 35063 2152 31746 293212;293213;293214;293215;293216;293217;293218;293219;293220;293221;293222;293223 232246;232247;232248;232249;232250;232251;232252;232253;232254;232255 232252 3461 10 MGGEEAEIR Unmodified 990.44404 0.44404482 2152 Q08211 DHX9 ATP-dependent RNA helicase A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.971 23.177 2 0.011336 23244 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.969 32.407 107080000 0 0 0 7893200 7068800 5716900 5333500 4456800 3389400 9556300 8056400 14849000 12726000 13643000 14392000 35064 2152 31746 293224;293225;293226;293227;293228;293229;293230;293231;293232;293233;293234;293235 232256;232257 232256 2 MGGEEKPIGAGEEK Oxidation (M) 1446.6661 0.66605885 1209 P26639 TARS Threonine--tRNA ligase, cytoplasmic yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 7.71 3.56 4 1 12 2 2 1 1 1 1 2 1 1 1 1 2 1 12.989 12.063 2;3 1.3578E-21 15464 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.17 89.83 375550000 52561000 244720000 1596600 2392000 2159400 2495300 6500100 1781300 2371200 0 10774000 19628000 0 7756600 20818000 35065 1209 31747 293236;293237;293238;293239;293240;293241;293242;293243;293244;293245;293246;293247;293248;293249;293250;293251;293252 232258;232259;232260;232261;232262;232263 232258 1770 2 MGGEEKPIGAGEEK Unmodified 1430.6711 0.67114423 1209 P26639 TARS Threonine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 6.4 3.86 5 2 8 2 4 1 2 2 2 2 19.723 18.103 2;3 3.3661E-09 24107 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 133.48 133.48 591480000 56736000 411890000 2022700 0 0 0 0 0 0 0 23324000 23788000 0 15788000 57931000 35066 1209 31747 293253;293254;293255;293256;293257;293258;293259;293260;293261;293262;293263;293264;293265;293266;293267 232264;232265;232266;232267;232268;232269;232270;232271;232272;232273;232274 232264 7 MGGGGAMNMGDPYGSGGQK Oxidation (M) 1786.7073 0.70728851 1151 P23246 SFPQ Splicing factor, proline- and glutamine-rich yes yes 0 1 0 By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 27 1 3 3 3 3 2 1 2 3 1 2 3 36.009 36.171 2 4.4314E-18 34238 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 97.551 97.551 93201000 0 0 0 3576500 6767400 10588000 12882000 8139500 4894200 0 9142200 16267000 4061700 6095800 10787000 35067 1151 31748 293268;293269;293270;293271;293272;293273;293274;293275;293276;293277;293278;293279;293280;293281;293282;293283;293284;293285;293286;293287;293288;293289;293290;293291;293292;293293;293294 232275;232276;232277;232278;232279;232280;232281;232282;232283;232284;232285;232286 232284 1652;1653;1654 12 MGGGGAMNMGDPYGSGGQK Unmodified 1770.7124 0.71237389 1151 P23246 SFPQ Splicing factor, proline- and glutamine-rich yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.913 47.079 2 2.0127E-38 52972 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 115.57 109.6 126570000 0 0 0 6984000 4780100 5896200 8487200 7140800 4482400 9931700 14932000 19084000 6381900 8852300 29612000 35068 1151 31748 293295;293296;293297;293298;293299;293300;293301;293302;293303;293304;293305;293306 232287;232288;232289;232290;232291;232292;232293;232294;232295;232296;232297;232298 232288 12 MGGGGAMNMGDPYGSGGQK 2 Oxidation (M) 1802.7022 0.70220313 1151 P23246 SFPQ Splicing factor, proline- and glutamine-rich yes yes 0 2 0 By MS/MS 10 0 1 1 25.018 25.704 2 3.7469E-06 26867 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 62.258 58.726 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35069 1151 31748 293307 232299 232299 1652;1653;1654 1 MGGGSIEVSVPR Unmodified 1187.5969 0.59685707 3873 Q96I24 FUBP3 Far upstream element-binding protein 3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 57.694 57.797 2 5.4483E-05 64825 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.149 72.113 69274000 0 0 0 8035800 0 0 6900700 0 5830000 0 0 0 13215000 11131000 24162000 35070 3873 31749 293308;293309;293310;293311;293312;293313;293314;293315;293316 232300;232301;232302;232303;232304;232305;232306;232307 232302 8 MGGMEGPFGGGMENMGR 4 Oxidation (M) 1777.6528 0.6528101 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 4 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 32.825 33.095 2 2.8647E-13 35690 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 93.623 89.577 154040000 0 0 0 11784000 0 14587000 0 0 14630000 14973000 24224000 26036000 22088000 10959000 14757000 35071 1681 31750 293317;293318;293319;293320;293321;293322;293323;293324;293325 232308;232309;232310;232311;232312;232313;232314;232315;232316 232315 2707;2708;2709;2710 9 MGGMEGPFGGGMENMGR 2 Oxidation (M) 1745.663 0.66298086 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 1 1 2 1 1 2 2 3 3 3 57.274 57.4 2 1.577E-19 68345 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 103.88 93.357 96743000 0 0 0 5722900 4951200 3660900 3931900 10190000 4472400 3700300 8640400 12781000 14653000 8905100 15134000 35072 1681 31750 293326;293327;293328;293329;293330;293331;293332;293333;293334;293335;293336;293337;293338;293339;293340;293341;293342;293343;293344;293345;293346;293347;293348 232317;232318;232319;232320;232321;232322;232323;232324;232325;232326;232327;232328;232329;232330;232331;232332;232333;232334;232335;232336 232324 2707;2708;2709;2710 20 MGGMEGPFGGGMENMGR 3 Oxidation (M) 1761.6579 0.65789548 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 3 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 2 2 1 1 2 2 2 2 1 2 42.96 43.143 2 5.1961E-05 52017 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 75.045 75.045 133410000 0 0 0 14166000 9251900 0 0 7915200 12476000 14737000 15174000 27019000 15940000 0 16729000 35073 1681 31750 293349;293350;293351;293352;293353;293354;293355;293356;293357;293358;293359;293360;293361;293362;293363;293364;293365 232337;232338;232339;232340;232341;232342;232343;232344;232345;232346;232347;232348;232349 232348 2707;2708;2709;2710 13 MGGMEGPFGGGMENMGR Oxidation (M) 1729.6681 0.66806623 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 2 2 2 2 66.48 66.623 2 1.7086E-31 79982 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 119.45 119.16 77330000 0 0 0 3844000 3297500 4309600 4350800 0 0 5902000 12534000 12401000 0 10147000 20543000 35074 1681 31750 293366;293367;293368;293369;293370;293371;293372;293373;293374;293375;293376;293377;293378 232350;232351;232352;232353;232354 232351 2707;2708;2709;2710 5 MGGMEGPFGGGMENMGR Unmodified 1713.6732 0.67315161 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 75.037 75.227 2 0.0050087 86671 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 49.12 42.232 33978000 0 0 0 0 0 0 0 5148800 0 3229000 4411700 0 0 4166100 17023000 35075 1681 31750 293379;293380;293381;293382;293383 232355;232356;232357 232356 3 MGGNQLFR Oxidation (M) 937.44399 0.44398525 3126 Q86SF2 GALNT7 N-acetylgalactosaminyltransferase 7 yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 31.14 31.518 2 0.017847 34458 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 57.559 44.352 8023800 0 0 0 0 0 0 2406200 0 0 0 0 5617600 0 0 0 35076 3126 31751 293384;293385 232358;232359 232358 4748 2 MGITEYNNQCR Unmodified 1384.5864 0.58636874 1441 P41252 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 36.373 36.7 2 0.0003115 39399 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 117.89 110.99 45862000 0 0 0 0 0 4767800 2475000 0 2763400 5830100 4827100 6001900 3204000 6478600 9514200 35077 1441 31752 293386;293387;293388;293389;293390;293391;293392;293393;293394 232360;232361;232362;232363;232364;232365 232361 5 MGITGNTSPFGQPFSQAGGQPMGATGVNPQLASK 2 Oxidation (M) 3364.5816 0.5816243 3662 Q92793 CREBBP CREB-binding protein yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 80.435 80.419 3 3.7607E-20 93087 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 46.31 40.65 39034000 0 0 0 3428600 0 0 0 0 0 16502000 11701000 0 7402600 0 0 35078 3662 31753 293395;293396;293397;293398 232366 232366 5185;5186 1 MGIVGPEFK Oxidation (M) 992.5001 0.50010314 2501 Q15149 PLEC Plectin yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 51.911 51.735 2 0.0034624 59336 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 78.77 61.806 36999000 0 0 0 13448000 5337000 6190200 7178500 0 4845000 0 0 0 0 0 0 35079 2501 31754 293399;293400;293401;293402;293403 232367;232368;232369;232370 232369 4105 4 MGIVGPEFK Unmodified 976.50519 0.50518852 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 63.524 63.575 2 0.0077875 73087 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 71.501 52.77 92682000 0 0 0 15490000 5808700 8257900 7067200 9842900 6267000 0 11275000 0 9128100 8314300 11231000 35080 2501 31754 293404;293405;293406;293407;293408;293409;293410;293411;293412;293413 232371;232372;232373;232374;232375;232376;232377 232376 7 MGIYVGAK Unmodified 837.44186 0.44185998 2064;1063 P17858;Q01813 PFKL;PFKP ATP-dependent 6-phosphofructokinase, liver type;ATP-dependent 6-phosphofructokinase, platelet type no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 42.83 42.96 2 0.015305 47906 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 69.093 36.122 119860000 0 0 0 5151700 5744800 0 8524200 12721000 4159700 9995500 18380000 0 13523000 14923000 26739000 35081 1063;2064 31755 293414;293415;293416;293417;293418;293419;293420;293421;293422;293423 232378;232379;232380;232381;232382;232383 232383 6 MGLALSSLNK Oxidation (M) 1048.5587 0.55868065 364 O43765 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 53.738 53.981 2 0.001448 60169 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.676 53.066 110840000 0 0 0 0 0 10157000 10071000 8881800 5086200 12528000 18470000 0 11292000 12389000 21967000 35082 364 31756 293424;293425;293426;293427;293428;293429;293430;293431;293432;293433 232384;232385;232386;232387;232388;232389;232390;232391 232387 463 8 MGLALSSLNK Unmodified 1032.5638 0.56376603 364 O43765 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.386 66.471 2 0.0019539 75919 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 97.431 67.245 181600000 0 0 0 6056500 5877700 9659200 9766900 9234400 6850200 16595000 18772000 22205000 10305000 14773000 51505000 35083 364 31756 293434;293435;293436;293437;293438;293439;293440;293441;293442;293443;293444;293445 232392;232393;232394;232395;232396;232397;232398;232399;232400;232401;232402;232403 232402 12 MGLAMGGGGGASFDR 2 Oxidation (M) 1414.5969 0.59693343 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 36.126 36.366 2 0.00011712 39912 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 65.5 60.888 510510000 0 0 0 0 31780000 39486000 45938000 38710000 28404000 44250000 49522000 78767000 63553000 53181000 36920000 35084 1681 31757 293446;293447;293448;293449;293450;293451;293452;293453;293454;293455;293456 232404;232405;232406;232407;232408;232409;232410;232411;232412;232413;232414 232405 2711;2712 11 MGLAMGGGGGASFDR Oxidation (M) 1398.602 0.6020188 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 1 1 2 1 1 2 1 2 2 2 1 48.465 48.665 2 7.3293E-06 53392 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 80.245 70.59 375050000 0 0 0 12202000 15417000 18957000 26915000 16886000 12490000 41288000 34387000 61590000 50202000 45631000 39087000 35085 1681 31757 293457;293458;293459;293460;293461;293462;293463;293464;293465;293466;293467;293468;293469;293470;293471;293472;293473 232415;232416;232417;232418;232419;232420;232421;232422;232423;232424;232425;232426;232427;232428;232429;232430 232423 2711;2712 15 MGLAMGGGGGASFDR Unmodified 1382.6071 0.60710418 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 2 1 2 1 2 1 1 1 1 2 62.86 63.04 2 0.00020756 70760 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 69.451 63.146 121380000 0 0 0 0 6116800 8825700 3760100 15442000 3994200 22178000 12049000 12529000 0 9128700 27354000 35086 1681 31757 293474;293475;293476;293477;293478;293479;293480;293481;293482;293483;293484;293485;293486;293487;293488 232431;232432;232433;232434;232435;232436;232437;232438;232439;232440;232441;232442;232443;232444 232441 14 MGLEDTLEQLNAMITESK Unmodified 2021.9649 0.96494299 214 O14777 NDC80 Kinetochore protein NDC80 homolog yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 98.976 92.524 3 0.00018739 119206 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.167 56.55 17983000 4480800 13502000 0 0 0 0 0 0 0 0 0 0 0 0 0 35087 214 31758 293489;293490 232445 232445 1 MGLEVIPVTSTTNK Unmodified 1488.7858 0.78578005 2974 Q6UN15 FIP1L1 Pre-mRNA 3'-end-processing factor FIP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.021 76.083 2 4.3748E-06 87748 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 111.63 84.957 128370000 0 0 0 6156300 7940500 7234200 7868200 10012000 6704900 11878000 11542000 15677000 7902300 12260000 23198000 35088 2974 31759 293491;293492;293493;293494;293495;293496;293497;293498;293499;293500;293501;293502 232446;232447;232448;232449;232450;232451;232452;232453;232454;232455;232456;232457;232458 232456 13 MGLEVIPVTSTTNK Oxidation (M) 1504.7807 0.78069468 2974 Q6UN15 FIP1L1 Pre-mRNA 3'-end-processing factor FIP1 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 67.628 67.845 2 1.1131E-05 76931 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 88.441 71.415 39744000 0 0 0 0 0 0 0 7192200 5029000 8534200 0 13856000 0 5133400 0 35089 2974 31759 293503;293504;293505;293506;293507;293508 232459;232460;232461;232462;232463 232461 4593 5 MGLGHEQGFGAPCLK Unmodified 1600.749 0.74901739 4880 Q9UGI8 TES Testin yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 70.2 64.23 3 0.00019949 85694 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.466 76.589 82028000 68690000 0 13338000 0 0 0 0 0 0 0 0 0 0 0 0 35090 4880 31760 293509;293510 232464;232465 232464 2 MGLLVDLTNTSR Oxidation (M) 1334.6864 0.68640036 450 O60942 RNGTT mRNA-capping enzyme;Polynucleotide 5'-triphosphatase;mRNA guanylyltransferase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 75.186 75.289 2 1.8546E-05 86850 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 96.89 83.298 64441000 0 0 0 0 5069200 0 7734200 5397600 6187000 7317500 9286000 10150000 6402700 6896500 0 35091 450 31761 293511;293512;293513;293514;293515;293516;293517;293518;293519 232466;232467;232468;232469;232470;232471;232472;232473 232466 573 8 MGLPGSDSQK Unmodified 1018.4753 0.47534495 4802 Q9P206 KIAA1522 Uncharacterized protein KIAA1522 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.359 29.551 2 0.013695 30868 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.113 29.585 110530000 0 0 0 5894400 6783200 6838500 6820700 6784700 5359500 10215000 9379600 12391000 12145000 12428000 15495000 35092 4802 31762 293520;293521;293522;293523;293524;293525;293526;293527;293528;293529;293530;293531 232474 232474 1 MGLPGSDSQK Oxidation (M) 1034.4703 0.47025958 4802 Q9P206 KIAA1522 Uncharacterized protein KIAA1522 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 15.73 15.85 2 0.014866 15587 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 46.016 25.317 37147000 0 0 0 3314400 3580800 3711100 4405800 2495300 2020500 4840600 5253800 7524400 0 0 0 35093 4802 31762 293532;293533;293534;293535;293536;293537;293538;293539;293540 232475;232476 232476 6162 2 MGLSMER 2 Oxidation (M) 854.36262 0.36262338 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 31 1 3 3 2 3 3 3 1 3 3 3 3 8.8244 8.9627 2 0.015833 6695 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 64.757 57.086 389090000 0 0 0 9569000 29497000 24349000 24523000 27763000 22727000 30738000 28984000 66921000 57016000 30283000 36717000 35094 1681 31763 293541;293542;293543;293544;293545;293546;293547;293548;293549;293550;293551;293552;293553;293554;293555;293556;293557;293558;293559;293560;293561;293562;293563;293564;293565;293566;293567;293568;293569;293570;293571 232477;232478;232479;232480;232481;232482;232483;232484;232485;232486;232487;232488;232489;232490;232491 232481 2713;2714 7 MGLSMER Unmodified 822.37279 0.37279414 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.309 37.489 2 0.023527 41453 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 92.467 55.638 875870000 0 0 0 41938000 45653000 57706000 42220000 67512000 43622000 82737000 90683000 105550000 91018000 83446000 123790000 35095 1681 31763 293572;293573;293574;293575;293576;293577;293578;293579;293580;293581;293582;293583 232492;232493;232494;232495;232496;232497;232498;232499 232495 5 MGLSMER Oxidation (M) 838.36771 0.36770876 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 16 1 1 2 1 2 2 2 2 1 1 1 22.397 22.588 2 0.019124 26053 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 76.035 41.33 223740000 0 0 0 8664000 7522200 25359000 11869000 23473000 24253000 32640000 34586000 22961000 0 16843000 15568000 35096 1681 31763 293584;293585;293586;293587;293588;293589;293590;293591;293592;293593;293594;293595;293596;293597;293598;293599 232500;232501;232502;232503 232503 2713;2714 4 MGLVMDR 2 Oxidation (M) 852.38336 0.38335882 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 15.969 16.135 2 0.015833 15596 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.757 22.039 345550000 0 0 0 23214000 20645000 28242000 28981000 21487000 22676000 36609000 37952000 48442000 0 37435000 39870000 35097 1681 31764 293600;293601;293602;293603;293604;293605;293606;293607;293608;293609;293610 232504;232505;232506;232507;232508;232509;232510;232511;232512;232513 232511 2715;2716 4 MGLVMDR Unmodified 820.39353 0.39352958 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 44.226 44.347 2 0.02229 50338 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 105.2 79.643 789720000 0 0 0 42607000 63745000 58053000 52476000 68809000 39123000 80536000 84352000 102310000 100870000 96844000 0 35098 1681 31764 293611;293612;293613;293614;293615;293616;293617;293618;293619;293620;293621 232514;232515;232516;232517 232517 4 MGLVMDR Oxidation (M) 836.38844 0.3884442 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 29.749 29.905 2 0.034074 32592 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 60.76 42.993 143230000 0 0 0 11071000 10213000 11496000 0 11251000 10821000 12732000 18495000 0 23468000 16039000 17645000 35099 1681 31764 293622;293623;293624;293625;293626;293627;293628;293629;293630;293631 232518;232519 232518 2715;2716 2 MGMPSSLAHR 2 Oxidation (M) 1117.5008 0.5008482 2705 Q53H96 PYCRL Pyrroline-5-carboxylate reductase 3 yes yes 0 2 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 11.862 11.829 2 0.0078363 10876 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 45.081 36.218 8107400 0 0 0 1394300 1469400 0 2218900 0 3024700 0 0 0 0 0 0 35100 2705 31765 293632;293633;293634;293635 232520 232520 4358;4359 1 MGNTPDSASDNLGFR Oxidation (M) 1596.6838 0.68383418 3396 Q8NBJ7 SUMF2 Sulfatase-modifying factor 2 yes yes 0 1 0 By MS/MS By matching By matching By MS/MS 10 0 4 1 1 1 1 47.614 47.815 2 2.3297E-14 52810 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 99.522 91.877 18960000 0 0 0 3331600 0 0 0 0 0 0 4386600 0 0 3856400 7385700 35101 3396 31766 293636;293637;293638;293639 232521;232522 232521 4955 2 MGNTPDSASDNLGFR Unmodified 1580.6889 0.68891956 3396 Q8NBJ7 SUMF2 Sulfatase-modifying factor 2 yes yes 0 0 0 By MS/MS 10 0 1 1 52.801 53.004 2 0.00028811 59180 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 67.385 60.725 5957100 0 0 0 0 0 0 0 0 0 0 0 0 0 5957100 0 35102 3396 31766 293640 232523 232523 1 MGPAIER Unmodified 772.39016 0.39015876 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 25.746 25.945 2 0.020538 27664 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 108.24 74.5 1136800000 0 0 0 0 78442000 91177000 95397000 112630000 81440000 0 139780000 239730000 160700000 137520000 0 35103 1681 31767 293641;293642;293643;293644;293645;293646;293647;293648;293649 232524;232525;232526;232527 232525 4 MGPAIER Oxidation (M) 788.38507 0.38507338 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 15.094 15.259 2 0.034074 14903 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 60.76 31.422 720350000 0 0 0 41548000 43087000 42757000 68431000 45751000 49799000 58619000 95081000 109630000 0 88042000 77606000 35104 1681 31767 293650;293651;293652;293653;293654;293655;293656;293657;293658;293659;293660 232528;232529 232529 2 MGPAMGPALGAGIER 2 Oxidation (M) 1458.6959 0.69591919 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 50.657 50.81 2 2.7988E-23 57376 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 119.39 108.86 1673500000 0 0 0 67348000 84986000 119140000 134270000 92553000 117560000 166360000 172820000 245010000 214200000 112570000 146710000 35105 1681 31768 293661;293662;293663;293664;293665;293666;293667;293668;293669;293670;293671;293672 232530;232531;232532;232533;232534;232535;232536;232537;232538;232539;232540;232541;232542;232543;232544;232545;232546;232547;232548;232549 232545 2717;2718 20 MGPAMGPALGAGIER Oxidation (M) 1442.701 0.70100457 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 61.261 61.362 2 4.1313E-19 72756 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 108.56 100.92 1065800000 0 0 0 58504000 63696000 68458000 71768000 79416000 55805000 98304000 115450000 125610000 106630000 93052000 129160000 35106 1681 31768 293673;293674;293675;293676;293677;293678;293679;293680;293681;293682;293683;293684;293685;293686;293687;293688;293689;293690;293691;293692;293693;293694;293695;293696 232550;232551;232552;232553;232554;232555;232556;232557;232558;232559;232560;232561;232562;232563;232564;232565;232566;232567;232568;232569;232570;232571;232572;232573;232574;232575 232551 2717;2718 26 MGPAMGPALGAGIER Unmodified 1426.7061 0.70608995 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.897 70.971 2 1.7742E-20 80603 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 116.54 103.19 705330000 0 0 0 22723000 31907000 46204000 36674000 64899000 30943000 62269000 71129000 70488000 55408000 67437000 145250000 35107 1681 31768 293697;293698;293699;293700;293701;293702;293703;293704;293705;293706;293707;293708 232576;232577;232578;232579;232580;232581;232582;232583;232584;232585;232586;232587;232588;232589;232590 232585 15 MGPFLTSQEK Unmodified 1136.5536 0.55359527 4821 Q9P2K8 EIF2AK4 Eukaryotic translation initiation factor 2-alpha kinase 4 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 58.488 52.429 2 0.021082 65247 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 64.04 39.885 16392000 12187000 0 4204400 0 0 0 0 0 0 0 0 0 0 0 0 35108 4821 31769 293709;293710 232591 232591 1 MGPGAASGGERPNLK Oxidation (M) 1456.7093 0.70926107 4338 Q9H0U4 RAB1B Ras-related protein Rab-1B yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 2 1 1 1 1 1 1 20.291 20.534 3 0.0004329 21498 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 57.414 47.088 243100000 0 0 0 0 24232000 0 20348000 21109000 0 0 49109000 60926000 37757000 0 29615000 35109 4338 31770 293711;293712;293713;293714;293715;293716;293717;293718;293719 232592;232593;232594;232595;232596;232597;232598 232593 5799 5 MGPGAASGGERPNLK Unmodified 1440.7143 0.71434645 4338 Q9H0U4 RAB1B Ras-related protein Rab-1B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 28.271 28.501 3 0.00040838 30778 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 63.128 49.164 157360000 0 0 0 10108000 6153300 0 0 8277000 9065800 18071000 29307000 25354000 16328000 15225000 19469000 35110 4338 31770 293720;293721;293722;293723;293724;293725;293726;293727;293728;293729 232599;232600;232601;232602;232603;232604;232605;232606;232607;232608;232609;232610 232606 8 MGPGATAGGAEK Unmodified 1045.4862 0.48624399 1911 P62820 RAB1A Ras-related protein Rab-1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.096 13.251 2 0.0014569 12579 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 67.726 48.995 95599000 0 0 0 4301900 4444700 4460700 6163800 4416600 4033700 12624000 12604000 13971000 10615000 6936500 11026000 35111 1911 31771 293730;293731;293732;293733;293734;293735;293736;293737;293738;293739;293740;293741 232611;232612;232613;232614;232615;232616;232617;232618;232619;232620;232621;232622 232614 12 MGPGIDR Oxidation (M) 760.35377 0.35377325 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.936 12.084 2 0.015389 10934 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 89.369 33.115 297720000 0 0 0 18538000 20872000 27796000 22517000 21177000 20275000 0 27036000 40768000 44812000 26244000 27690000 35112 1681 31772 293742;293743;293744;293745;293746;293747;293748;293749;293750;293751;293752 232623;232624;232625;232626;232627;232628;232629;232630;232631;232632 232627 2719 10 MGPLGLDHMASSIER 2 Oxidation (M) 1644.76 0.75997601 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 1 1 2 2 2 2 2 2 2 2 1 48.625 48.835 2;3 1.1419E-07 54108 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 87.647 76.033 1777600000 0 0 0 105730000 8325500 12695000 154520000 121020000 148650000 177300000 198090000 376410000 338440000 114560000 21872000 35113 1681 31773 293753;293754;293755;293756;293757;293758;293759;293760;293761;293762;293763;293764;293765;293766;293767;293768;293769;293770;293771;293772 232633;232634;232635;232636;232637;232638;232639;232640;232641;232642;232643;232644;232645;232646;232647;232648 232642 2720;2721 11 MGPLGLDHMASSIER Unmodified 1612.7701 0.77014677 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 1 2 1 2 2 1 1 1 2 2 2 74.777 74.87 2;3 5.3611E-06 85704 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.448 74.217 345750000 0 0 0 2931300 4209600 20295000 5406900 31106000 21781000 20227000 17269000 28782000 16569000 27623000 149550000 35114 1681 31773 293773;293774;293775;293776;293777;293778;293779;293780;293781;293782;293783;293784;293785;293786;293787;293788;293789;293790 232649;232650;232651;232652;232653;232654;232655;232656;232657;232658;232659 232651 11 MGPLGLDHMASSIER Oxidation (M) 1628.7651 0.76506139 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 1 1 2 2 1 2 3 3 3 1 2 3 62.072 62.258 2;3 5.5756E-06 78059 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.431 65.892 499410000 0 0 0 25550000 14489000 35117000 27759000 38215000 28627000 44801000 90603000 51415000 3912900 57137000 81787000 35115 1681 31773 293791;293792;293793;293794;293795;293796;293797;293798;293799;293800;293801;293802;293803;293804;293805;293806;293807;293808;293809;293810;293811;293812;293813;293814 232660;232661;232662;232663;232664;232665;232666;232667;232668;232669;232670;232671;232672 232662 2720;2721 8 MGPLNISTPVEPVAASK Oxidation (M) 1725.8971 0.89712142 1420 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 74.295 74.493 2 6.8012E-25 85917 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 104.87 91.432 26513000 0 0 0 0 0 0 4446800 0 3581200 4737800 6417500 0 0 0 7329300 35116 1420 31774 293815;293816;293817;293818;293819;293820;293821;293822 232673;232674;232675;232676;232677;232678;232679 232677 2234 7 MGPLNISTPVEPVAASK Unmodified 1709.9022 0.9022068 1420 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 yes yes 0 0 0 By MS/MS 2 0 1 1 83.555 78.835 2 0.00097068 97995 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.892 69.92 32245000 0 32245000 0 0 0 0 0 0 0 0 0 0 0 0 0 35117 1420 31774 293823 232680 232680 1 MGPNIYELR Unmodified 1091.5434 0.54336494 4078 Q9BPW8 NIPSNAP1 Protein NipSnap homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 66.101 66.105 2 0.0089221 75635 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 68.224 46.696 51358000 0 0 0 0 7497300 9061300 6646100 0 6802700 11900000 0 0 9451000 0 0 35118 4078 31775 293824;293825;293826;293827;293828;293829;293830 232681;232682;232683;232684;232685;232686;232687 232682 7 MGPNIYELR Oxidation (M) 1107.5383 0.53827956 4078 Q9BPW8 NIPSNAP1 Protein NipSnap homolog 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.772 56.895 2 0.017583 64483 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 49.715 37.508 105560000 0 0 0 8203600 7618500 6999500 7854900 7663100 6647000 10591000 13264000 14153000 5808700 8121700 8635400 35119 4078 31775 293831;293832;293833;293834;293835;293836;293837;293838;293839;293840;293841;293842 232688;232689;232690;232691;232692;232693;232694 232691 5585 6 MGPNLQLIEGDAK Oxidation (M) 1400.697 0.69696505 4471 Q9H9E3 COG4 Conserved oligomeric Golgi complex subunit 4 yes yes 0 1 0 By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 68.642 68.511 2 0.00042025 78438 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 74.944 61.988 18675000 0 0 0 1810200 3205400 4661200 2666500 0 0 3719200 0 0 2612800 0 0 35120 4471 31776 293843;293844;293845;293846;293847;293848 232695;232696;232697 232696 5910 3 MGPNLQLIEGDAK Unmodified 1384.7021 0.70205043 4471 Q9H9E3 COG4 Conserved oligomeric Golgi complex subunit 4 yes yes 0 0 0 By MS/MS 10 0 1 1 75.274 75.501 2 0.049482 87179 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 44.847 30.173 3842500 0 0 0 0 0 0 0 0 0 0 0 3842500 0 0 0 35121 4471 31776 293849 232698 232698 0 MGPRILDLQLEFDEK Oxidation (M) 1818.9186 0.91858514 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 1 1 By MS/MS 2 0 1 1 91.081 82.95 3 0.004781 107629 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.727 40.356 6871600 6871600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35122 4819 31777 293850 232699 232699 6187 1 MGPRILDLQLEFDEK Unmodified 1802.9237 0.92367052 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS 2 0 1 1 93.583 85.453 3 0.011535 110691 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 35.711 29.294 5525300 5525300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35123 4819 31777 293851 232700 232700 1 MGPSGGEGMEPERR Unmodified 1488.6449 0.64494625 2452 Q14847 LASP1 LIM and SH3 domain protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 2 24.509 24.779 2;3 0.0023271 26044 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 66.533 66.533 218200000 0 0 0 6029200 2684200 0 6322600 4614200 0 5742300 24222000 32355000 6890500 25103000 104240000 35124 2452 31778 293852;293853;293854;293855;293856;293857;293858;293859;293860;293861;293862 232701;232702;232703;232704;232705 232703 2 MGPSGGEGMEPERR Oxidation (M) 1504.6399 0.63986087 2452 Q14847 LASP1 LIM and SH3 domain protein 1 yes yes 0 1 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 16.277 16.398 3 0.0024688 14822 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 40.477 26.815 31256000 0 0 0 1728300 669970 0 2386400 1958300 0 0 8595100 0 3742900 12175000 0 35125 2452 31778 293863;293864;293865;293866;293867;293868;293869 232706 232706 4028;4029 1 MGPSGGEGMEPERR 2 Oxidation (M) 1520.6348 0.6347755 2452 Q14847 LASP1 LIM and SH3 domain protein 1 yes yes 0 2 1 By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 8.0689 8.1463 3 0.00089645 6711 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 59.607 45.928 56632000 0 0 0 3231900 2416000 2553700 2594300 2172300 0 5152200 0 21077000 5620100 11815000 0 35126 2452 31778 293870;293871;293872;293873;293874;293875;293876;293877;293878 232707 232707 4028;4029 0 MGPSVGSQQELR Unmodified 1287.6241 0.62413446 354 O43683 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 38.423 38.787 2 0.015995 43131 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 42.743 30.896 22287000 0 0 0 0 0 0 0 2959400 0 3915500 3933300 0 0 3320000 8158800 35127 354 31779 293879;293880;293881;293882;293883 232708;232709;232710 232708 2 MGPVMDR 2 Oxidation (M) 836.35206 0.35205869 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 6.7491 6.8448 2 0.012868 4864 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 68.915 59.674 240260000 0 0 0 16021000 18096000 0 26349000 18997000 24149000 32835000 0 32842000 42224000 28749000 0 35128 1681 31780 293884;293885;293886;293887;293888;293889;293890;293891;293892 232711;232712;232713;232714;232715;232716;232717 232712 2722;2723 7 MGPVMDR Oxidation (M) 820.35714 0.35714407 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 1 0 By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 14.544 14.627 2 0.032881 13802 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 63.306 45.612 185250000 0 0 0 13872000 20150000 16461000 18550000 17261000 18285000 26395000 0 0 29535000 0 24735000 35129 1681 31780 293893;293894;293895;293896;293897;293898;293899;293900;293901 232718 232718 2722;2723 1 MGQAPSQSLLPPAQDQPR Unmodified 1919.9523 0.95234489 5066 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 62.111 62.293 2 0.00060329 70466 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.83 62.132 29246000 0 0 0 3001500 0 0 0 2437700 2522000 0 3850100 6161100 0 3323400 7950200 35130 5066 31781 293902;293903;293904;293905;293906;293907;293908 232719;232720;232721 232719 3 MGQAPSQSLLPPAQDQPR Oxidation (M) 1935.9473 0.94725951 5066 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 0 1 0 By matching By matching By MS/MS 10 0 3 1 1 1 56.836 56.927 2 0.00037904 65042 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 52.555 41.022 15392000 0 0 0 0 4138700 0 0 0 0 0 0 6804100 4449600 0 0 35131 5066 31781 293909;293910;293911 232722 232722 6422 1 MGQAVPAPTGAPPGGQPDYSAAWAEYYR Oxidation (M) 2923.3235 0.32354234 3737 Q96AE4 FUBP1 Far upstream element-binding protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 82.285 82.424 3 1.6393E-25 94697 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 73.072 70.243 216580000 0 0 0 0 0 7051700 4995000 11726000 6515900 31971000 21536000 24425000 9229700 19800000 79331000 35132 3737 31782 293912;293913;293914;293915;293916;293917;293918;293919;293920;293921 232723;232724;232725;232726;232727;232728;232729;232730;232731;232732;232733 232731 5311 11 MGQAVPAPTGAPPGGQPDYSAAWAEYYR Unmodified 2907.3286 0.32862772 3737 Q96AE4 FUBP1 Far upstream element-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 83.629 83.774 3 8.6045E-22 96669 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.465 67.468 26299000 0 0 0 0 0 0 0 0 0 6484300 0 0 0 0 19815000 35133 3737 31782 293922;293923 232734;232735 232735 2 MGQIIQYDK Unmodified 1094.543 0.54303059 2725 Q5GLZ8 HERC4 Probable E3 ubiquitin-protein ligase HERC4 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 47.366 46.048 2 0.0054868 59005 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.11 73.754 484030000 17669000 395220000 0 0 0 7816900 4888700 0 4242800 9880700 12888000 0 9817100 0 21604000 35134 2725 31783 293924;293925;293926;293927;293928;293929;293930;293931;293932 232736;232737;232738;232739 232737 4 MGQIIQYDK Oxidation (M) 1110.5379 0.53794521 2725 Q5GLZ8 HERC4 Probable E3 ubiquitin-protein ligase HERC4 yes yes 0 1 0 By MS/MS By matching 2.33 0.471 2 1 2 1 38.839 34.451 2 0.00049461 44616 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.16 95.273 47858000 0 46474000 1383600 0 0 0 0 0 0 0 0 0 0 0 0 35135 2725 31783 293933;293934;293935 232740;232741 232740 4370 2 MGQLGLGNQTDAVPSPAQIMYNGQPITK 2 Oxidation (M) 2960.4372 0.43719189 4806 Q9P258 RCC2 Protein RCC2 yes yes 0 2 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 80.648 79.934 3 5.1551E-19 92341 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 63.361 51.62 103030000 0 34367000 0 0 5144700 7319100 4626900 6385500 5392400 0 11363000 12727000 0 0 15708000 35136 4806 31784 293936;293937;293938;293939;293940;293941;293942;293943;293944;293945 232742;232743;232744;232745;232746;232747 232745 6167;6168 6 MGQLGLGNQTDAVPSPAQIMYNGQPITK Unmodified 2928.4474 0.44736265 4806 Q9P258 RCC2 Protein RCC2 yes yes 0 0 0 By MS/MS 2 0 1 1 91.331 86.421 3 6.987E-22 107262 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.576 77.464 68648000 0 68648000 0 0 0 0 0 0 0 0 0 0 0 0 0 35137 4806 31784 293946 232748 232748 1 MGQMAMGGAMGINNR 4 Oxidation (M) 1601.6419 0.64185148 2508 Q15233 NONO Non-POU domain-containing octamer-binding protein yes yes 0 4 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.292 14.455 2 9.3462E-20 13701 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 113.93 107.39 100240000 0 0 0 7109600 5854600 8694800 8046500 6169900 4899800 8003200 9878300 14503000 9054000 5761100 12260000 35138 2508 31785 293947;293948;293949;293950;293951;293952;293953;293954;293955;293956;293957;293958 232749;232750;232751;232752;232753;232754;232755;232756;232757;232758;232759 232757 4122;4123;4124;4125 11 MGQMAMGGAMGINNR Unmodified 1537.6622 0.662193 2508 Q15233 NONO Non-POU domain-containing octamer-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 59.282 59.562 2 9.5223E-06 67069 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 105.98 99.122 60578000 0 0 0 0 0 3905900 4558200 5689900 0 5467000 10539000 7851200 0 0 22567000 35139 2508 31785 293959;293960;293961;293962;293963;293964;293965;293966 232760;232761;232762;232763;232764;232765;232766 232762 7 MGQMAMGGAMGINNR 2 Oxidation (M) 1569.652 0.65202224 2508 Q15233 NONO Non-POU domain-containing octamer-binding protein yes yes 0 2 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 2 1 1 2 1 2 1 2 1 35.986 36.024 2 1.1865E-07 43836 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 88.681 72.79 50157000 0 0 0 5310000 2433600 2466600 8241800 3834100 0 11534000 7186800 0 9149500 0 0 35140 2508 31785 293967;293968;293969;293970;293971;293972;293973;293974;293975;293976;293977;293978;293979 232767;232768;232769;232770;232771;232772;232773;232774 232771 4122;4123;4124;4125 8 MGQMAMGGAMGINNR Oxidation (M) 1553.6571 0.65710762 2508 Q15233 NONO Non-POU domain-containing octamer-binding protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 2 1 4 4 44.889 45.364 2 5.7953E-19 50889 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.24 100.71 72555000 0 0 0 0 0 0 0 12186000 0 5007000 0 6012200 0 12034000 37315000 35141 2508 31785 293980;293981;293982;293983;293984;293985;293986;293987;293988;293989;293990;293991;293992;293993 232775;232776;232777;232778;232779;232780;232781;232782;232783;232784;232785;232786;232787 232778 4122;4123;4124;4125 13 MGQMAMGGAMGINNR 3 Oxidation (M) 1585.6469 0.64693686 2508 Q15233 NONO Non-POU domain-containing octamer-binding protein yes yes 0 3 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching 10 0 18 3 2 2 2 1 1 2 2 1 1 1 22.26 22.407 2 0.00065278 23531 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.348 50.495 47138000 0 0 0 4094100 3705200 4466500 4963000 1352400 0 4302100 9370100 5640200 3526800 2783300 2934600 35142 2508 31785 293994;293995;293996;293997;293998;293999;294000;294001;294002;294003;294004;294005;294006;294007;294008;294009;294010;294011 232788;232789;232790;232791;232792 232791 4122;4123;4124;4125 5 MGQNLNRIPYK Unmodified 1332.6972 0.69723982 2284 Q13418 ILK Integrin-linked protein kinase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.255 42.431 3 0.0057953 46760 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 40.496 32.086 269290000 0 0 0 10424000 11536000 23496000 16095000 16410000 15770000 21938000 34853000 31317000 23104000 25064000 39283000 35143 2284 31786 294012;294013;294014;294015;294016;294017;294018;294019;294020;294021;294022;294023 232793;232794;232795;232796 232796 4 MGQPGSGSMPSR Unmodified 1190.5172 0.51722654 4047 Q99700 ATXN2 Ataxin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 23.866 24.029 2 0.008028 25254 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 50.292 38.929 33537000 0 0 0 2848200 2217300 2278700 2843300 2357900 1944000 4137700 4309000 4329000 3434800 2837000 0 35144 4047 31787 294024;294025;294026;294027;294028;294029;294030;294031;294032;294033;294034 232797;232798;232799 232797 3 MGQPVLPR Unmodified 896.49021 0.49020716 3631 Q92576 PHF3 PHD finger protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 42.199 42.415 2 0.010759 47516 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 78.616 38.512 80664000 0 0 0 5225400 0 7465700 6308900 7263600 5149700 8432300 0 9041200 11275000 8365800 12136000 35145 3631 31788 294035;294036;294037;294038;294039;294040;294041;294042;294043;294044 232800;232801;232802;232803 232802 4 MGQPVLPR Oxidation (M) 912.48512 0.48512178 3631 Q92576 PHF3 PHD finger protein 3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 31.883 32.162 2 0.02461 35231 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 88.35 67.725 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35146 3631 31788 294045;294046;294047;294048;294049;294050 232804;232805;232806;232807;232808;232809 232807 6 MGQTMER Oxidation (M) 867.35787 0.35787235 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 5.7482 5.8656 2 0.020597 2644 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 73.975 42.396 77214000 0 0 0 3473000 6374000 6108900 6107400 6445700 5231600 7436700 6140600 8502600 8880100 5536600 6976200 35147 1681 31789 294051;294052;294053;294054;294055;294056;294057;294058;294059;294060;294061;294062 232810;232811;232812;232813 232812 4 MGQTMER Unmodified 851.36296 0.36295773 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 9.5888 9.7018 2 0.023185 8054 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 102.77 61.565 170120000 0 0 0 11498000 10947000 13118000 16643000 19762000 11453000 11605000 0 20755000 16905000 15189000 22249000 35148 1681 31789 294063;294064;294065;294066;294067;294068;294069;294070;294071;294072;294073 232814;232815;232816;232817;232818;232819;232820;232821 232819 8 MGRAELLEGK Acetyl (Protein N-term);Oxidation (M) 1160.586 0.58595803 5024 Q9UN19 DAPP1 Dual adapter for phosphotyrosine and 3-phosphotyrosine and 3-phosphoinositide yes yes 1 1 1 By MS/MS By MS/MS 2 0 2 1 1 79.418 75.767 2 0.00508 93107 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 59.35 26.995 21797000 0 17437000 4359900 0 0 0 0 0 0 0 0 0 0 0 0 35149 5024 31790 294074;294075 232822;232823 232823 6365 2 MGRFQVSVAADGAQK Unmodified 1563.7828 0.78276036 4393 Q9H4A3 WNK1 Serine/threonine-protein kinase WNK1 yes yes 0 0 1 By MS/MS 2 0 1 1 57.838 49.633 3 0.016764 67755 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.186 35.582 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35150 4393 31791 294076 232824 232824 1 MGRGPGPLQER Oxidation (M) 1212.6033 0.60333943 1473 P43243 MATR3 Matrin-3 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 2 2 1 17.416 17.632 3 0.0019207 18263 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 58.674 35.448 901460000 0 0 0 44678000 66198000 0 82371000 76990000 75399000 81474000 73669000 147840000 100840000 63220000 88774000 35151 1473 31792 294077;294078;294079;294080;294081;294082;294083;294084;294085;294086;294087;294088;294089 232825;232826;232827;232828;232829;232830;232831;232832;232833;232834 232826 2313 4 MGRGPGPLQER Unmodified 1196.6084 0.60842481 1473 P43243 MATR3 Matrin-3 yes yes 0 0 1 By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 15 2 1 1 1 2 1 1 1 2 1 1 1 23.299 23.472 2;3 0.012905 23494 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 59.57 45.8 289930000 0 0 0 64221000 4746400 4619400 9069400 125370000 5701500 8648100 13129000 15682000 15769000 9593800 13380000 35152 1473 31792 294090;294091;294092;294093;294094;294095;294096;294097;294098;294099;294100;294101;294102;294103;294104 232835;232836;232837 232837 1 MGRLTEAAAAGSGSR Acetyl (Protein N-term);Oxidation (M) 1491.71 0.70998935 40 B0YJ81 HACD1 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 1 yes yes 1 1 1 By MS/MS By MS/MS 10 0 2 1 1 53.156 53.565 2 0.0046492 60816 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 43.282 13.472 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35153 40 31793 294105;294106 232838;232839 232838 38 2 MGSGIER Oxidation (M) 764.34869 0.34868788 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 1 0 By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 14 1 1 2 1 1 1 1 2 1 2 1 6.0842 6.1931 2 0.015499 4225 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 92.467 30.128 266950000 0 0 0 4516700 18651000 16338000 14495000 73112000 10890000 15998000 33844000 16887000 48832000 13384000 0 35154 1681 31794 294107;294108;294109;294110;294111;294112;294113;294114;294115;294116;294117;294118;294119;294120 232840;232841 232841 2724 2 MGSGIQYGDAALR Oxidation (M) 1353.6347 0.63469914 1103 P20338 RAB4A Ras-related protein Rab-4A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.479 48.641 2 3.1452E-12 54618 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 123.79 90.53 106790000 0 0 0 8552800 5115400 9363100 8562600 6996800 6691300 9957900 10499000 14529000 10588000 6459000 9476800 35155 1103 31795 294121;294122;294123;294124;294125;294126;294127;294128;294129;294130;294131;294132 232842;232843;232844;232845;232846;232847;232848;232849;232850;232851 232843 1586 10 MGSGIQYGDAALR Unmodified 1337.6398 0.63978452 1103 P20338 RAB4A Ras-related protein Rab-4A yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 54.907 55.036 2 0.0012631 61405 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.721 50.941 143310000 0 0 0 8884900 6308300 9649500 11152000 12855000 0 13723000 15655000 20219000 11256000 13653000 19958000 35156 1103 31795 294133;294134;294135;294136;294137;294138;294139;294140;294141;294142;294143 232852;232853;232854;232855;232856;232857;232858;232859;232860 232853 7 MGSPAPLLPGDLLGGGSDSI Oxidation (M) 1868.919 0.91897907 5055 Q9UPQ9 TNRC6B Trinucleotide repeat-containing gene 6B protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 96.2 96.355 2 2.5013E-05 112070 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 57.019 51.296 11016000 0 0 0 0 0 0 0 1473500 0 5808900 0 0 0 0 3733800 35157 5055 31796 294144;294145;294146 232861;232862 232861 6408 2 MGTLVSLEPSSVASDVSK Oxidation (M) 1821.903 0.90299466 4136 Q9BT73 PSMG3 Proteasome assembly chaperone 3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.56 3.86 3 1 5 1 2 1 1 1 1 1 1 77.468 75.462 2 2.0032E-71 93333 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 172.57 138.81 477350000 6523600 431200000 6751800 0 0 4476000 0 0 0 3854100 5193200 7833400 0 0 11517000 35158 4136 31797 294147;294148;294149;294150;294151;294152;294153;294154;294155 232863;232864;232865;232866;232867;232868;232869;232870;232871;232872 232865 5619 10 MGTLVSLEPSSVASDVSK Unmodified 1805.9081 0.90808003 4136 Q9BT73 PSMG3 Proteasome assembly chaperone 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.25 3.34 2 1 1 2 1 1 81.873 79.31 2 7.9245E-06 91858 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.734 81.194 966670000 0 950230000 5407000 0 0 0 0 0 0 0 0 0 0 0 11034000 35159 4136 31797 294156;294157;294158;294159 232873;232874;232875 232874 3 MGTLVSLEPSSVASDVSKPVLTTK Oxidation (M) 2461.2986 0.29855637 4136 Q9BT73 PSMG3 Proteasome assembly chaperone 3 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 84.981 80.332 3 8.9929E-57 101803 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 129.84 122.96 123430000 27755000 83973000 11698000 0 0 0 0 0 0 0 0 0 0 0 0 35160 4136 31798 294160;294161;294162;294163 232876;232877;232878;232879;232880 232879 5619 5 MGTLVSLEPSSVASDVSKPVLTTK Unmodified 2445.3036 0.30364175 4136 Q9BT73 PSMG3 Proteasome assembly chaperone 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 87.511 82.854 3 8.0727E-16 104858 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.946 82.915 133070000 33958000 92497000 6617200 0 0 0 0 0 0 0 0 0 0 0 0 35161 4136 31798 294164;294165;294166;294167 232881;232882;232883;232884;232885 232884 5 MGTPVPRPPQDMGQIGVR Oxidation (M) 1950.9768 0.9767855 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 2 1 1 1 1 1 64.216 64.449 3 7.1827E-07 73677 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 77.468 62.509 218610000 0 0 0 0 0 21407000 15993000 22459000 15280000 0 25614000 34161000 22170000 26581000 34946000 35162 2290 31799 294168;294169;294170;294171;294172;294173;294174;294175;294176;294177 232886;232887;232888;232889;232890;232891;232892;232893;232894;232895;232896;232897 232892 3740;3741 11 MGTPVPRPPQDMGQIGVR Unmodified 1934.9819 0.98187088 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 68.725 68.856 3 6.1889E-09 78442 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 63.918 54.337 207930000 0 0 0 6854700 0 21369000 8620700 16078000 9566500 23080000 18364000 27298000 11220000 21644000 43837000 35163 2290 31799 294178;294179;294180;294181;294182;294183;294184;294185;294186;294187;294188 232898;232899;232900;232901 232901 0 MGTPVPRPPQDMGQIGVR 2 Oxidation (M) 1966.9717 0.97170012 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 2 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 50.207 50.324 3 0.00077948 56891 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 46.249 40.706 218240000 0 0 0 41458000 0 0 0 39556000 0 0 0 0 0 77385000 59839000 35164 2290 31799 294189;294190;294191;294192 232902 232902 3740;3741 1 MGVASTEEETQAVMK Unmodified 1609.7328 0.73275821 522 O75592 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 yes yes 0 0 0 By MS/MS 2 0 1 1 58.774 52.931 2 9.8551E-16 68252 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 141.93 129.89 11147000 0 11147000 0 0 0 0 0 0 0 0 0 0 0 0 0 35165 522 31800 294193 232903 232903 1 MGVSPGNPVDSHAYPHIQNSK Oxidation (M) 2250.0488 0.048764467 2989 Q6W2J9 BCOR BCL-6 corepressor yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 52.954 46.939 4 1.8919E-11 64225 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 92.913 85.201 36849000 31883000 0 4965600 0 0 0 0 0 0 0 0 0 0 0 0 35166 2989 31801 294194;294195 232904;232905 232905 4602 2 MGVSPGNPVDSHAYPHIQNSK Unmodified 2234.0538 0.053849845 2989 Q6W2J9 BCOR BCL-6 corepressor yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 59.125 53.071 4 0.020371 71794 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 26.13 17.53 57081000 53037000 0 4044100 0 0 0 0 0 0 0 0 0 0 0 0 35167 2989 31801 294196;294197 232906 232906 1 MGVVECAK Unmodified 892.41466 0.41465895 5067 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 yes yes 0 0 0 By MS/MS 2 0 1 1 24.623 20.495 2 0.038396 27066 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.342 45.516 34620000 0 34620000 0 0 0 0 0 0 0 0 0 0 0 0 0 35168 5067 31802 294198 232907 232907 1 MGWSGSGGLGAK Unmodified 1106.5179 0.51787847 3249 Q8IWX8 CHERP Calcium homeostasis endoplasmic reticulum protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48.565 47.777 2 1.6004E-05 64549 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 109.66 76.401 138860000 33668000 0 3126600 4865600 5426000 8444800 6927700 0 8886100 11113000 12259000 11039000 9228600 9475600 14403000 35169 3249 31803 294199;294200;294201;294202;294203;294204;294205;294206;294207;294208;294209;294210;294211;294212 232908;232909;232910;232911;232912;232913;232914;232915;232916;232917;232918 232913 11 MGWSGSGGLGAK Oxidation (M) 1122.5128 0.51279309 3249 Q8IWX8 CHERP Calcium homeostasis endoplasmic reticulum protein yes yes 0 1 0 By MS/MS By matching 2 0 2 1 1 40.417 34.571 2 0.020935 47703 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.725 37.95 15872000 8087100 7785000 0 0 0 0 0 0 0 0 0 0 0 0 0 35170 3249 31803 294213;294214 232919 232919 1 MGWTGGGLGK Unmodified 962.46439 0.46438634 265 O15226 NKRF NF-kappa-B-repressing factor yes yes 0 0 0 By MS/MS 2 0 1 1 57.487 49.307 2 0.012276 67323 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.038 54.19 12753000 12753000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35171 265 31804 294215 232920 232920 1 MGYDTPLHFACK Unmodified 1438.6373 0.63734168 3197 Q86XL3 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 74.249 66.119 3 0.021466 87462 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 29.071 21.16 13013000 13013000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35172 3197 31805 294216 232921 232921 1 MGYEEVSQK Oxidation (M) 1085.4699 0.46992522 3761 Q96BN8 OTULIN Ubiquitin thioesterase otulin yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 17.781 14.242 2 0.024658 18297 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.993 49.957 22646000 0 22646000 0 0 0 0 0 0 0 0 0 0 0 0 0 35173 3761 31806 294217;294218 232922 232922 1 MGYEEVSQK Unmodified 1069.475 0.4750106 3761 Q96BN8 OTULIN Ubiquitin thioesterase otulin yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 29.043 24.081 2 0.0046742 31486 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.7 94.062 175370000 8560600 166810000 0 0 0 0 0 0 0 0 0 0 0 0 0 35174 3761 31806 294219;294220 232923 232923 1 MGYNACTLHGGK Unmodified 1307.5751 0.57507577 4168 Q9BUQ8 DDX23 Probable ATP-dependent RNA helicase DDX23 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 28.411 27.341 3 0.0072119 39241 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 59.57 56.229 408280000 288180000 32028000 21768000 4389900 4467100 0 4541600 4085800 4157300 5907000 7243800 11354000 7118300 5826000 7214900 35175 4168 31807 294221;294222;294223;294224;294225;294226;294227;294228;294229;294230;294231;294232;294233;294234;294235 232924;232925;232926;232927;232928;232929 232927 4 MGYNACTLHGGK Oxidation (M) 1323.57 0.56999039 4168 Q9BUQ8 DDX23 Probable ATP-dependent RNA helicase DDX23 yes yes 0 1 0 By MS/MS By MS/MS 2 0 3 1 2 22.218 19.008 2;3 0.032489 24080 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 41.218 33.651 41643000 0 24318000 17325000 0 0 0 0 0 0 0 0 0 0 0 0 35176 4168 31807 294236;294237;294238 232930;232931 232931 1 MHAADLEK Oxidation (M) 929.42767 0.42766648 1739;2856 P54278;Q68D20 PMS2;PMS2CL Mismatch repair endonuclease PMS2;Protein PMS2CL no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 2 1 1 6.949 6.5152 2 0.0031641 7488 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.17 77.871 89476000 0 37005000 0 3264000 0 4457200 5044700 0 4701200 6460700 7295500 4944200 5256200 0 11047000 35177 1739;2856 31808 294239;294240;294241;294242;294243;294244;294245;294246;294247;294248;294249;294250;294251;294252 232932;232933;232934;232935;232936;232937;232938;232939;232940;232941;232942;232943 232935 2817 12 MHAADLEK Unmodified 913.43275 0.43275186 1739;2856 P54278;Q68D20 PMS2;PMS2CL Mismatch repair endonuclease PMS2;Protein PMS2CL no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.2 3.92 3 2 1 1 1 1 1 17.575 14.176 2 0.028775 17499 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 77.318 51.209 54774000 3652600 28793000 22328000 0 0 0 0 0 0 0 0 0 0 0 0 35178 1739;2856 31808 294253;294254;294255;294256;294257 232944;232945;232946;232947 232947 4 MHAADLEK Acetyl (Protein N-term) 955.44332 0.44331654 1739;2856 P54278;Q68D20 PMS2;PMS2CL Mismatch repair endonuclease PMS2;Protein PMS2CL no no 1 0 0 By MS/MS 2 0 1 1 38.781 33.814 2 0.044902 44078 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 41.956 21.502 12803000 0 12803000 0 0 0 0 0 0 0 0 0 0 0 0 0 35179 1739;2856 31808 294258 232948 232948 1 MHAPPINMESVHMK 3 Oxidation (M) 1668.7422 0.74221746 1538 P48444 ARCN1 Coatomer subunit delta yes yes 0 3 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 23.355 22.163 3 0.00011754 32209 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.466 74.396 185170000 118240000 0 32853000 0 4516100 7979700 9948000 0 0 6539600 0 0 0 5097400 0 35180 1538 31809 294259;294260;294261;294262;294263;294264;294265;294266 232949;232950;232951;232952;232953;232954 232952 2445;2446;2447 6 MHAPPINMESVHMK Unmodified 1620.7575 0.75747359 1538 P48444 ARCN1 Coatomer subunit delta yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 4.67 3.77 4 2 2 2 1 1 65.303 60.684 3;4 0.00023274 79964 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 55.261 43.647 308750000 223950000 65553000 0 0 0 6672900 0 0 0 0 0 0 0 0 12574000 35181 1538 31809 294267;294268;294269;294270;294271;294272 232955;232956;232957;232958;232959;232960;232961 232956 6 MHAPPINMESVHMK Oxidation (M) 1636.7524 0.75238821 1538 P48444 ARCN1 Coatomer subunit delta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 7 5 1 1 56.461 49.412 3;4 5.0736E-10 70744 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.38 106.03 512760000 448680000 50109000 13972000 0 0 0 0 0 0 0 0 0 0 0 0 35182 1538 31809 294273;294274;294275;294276;294277;294278;294279 232962;232963;232964;232965;232966;232967;232968;232969;232970 232967 2445;2446;2447 8 MHAPPINMESVHMK 2 Oxidation (M) 1652.7473 0.74730283 1538 P48444 ARCN1 Coatomer subunit delta yes yes 0 2 0 By MS/MS By MS/MS By MS/MS 2 0 9 4 2 3 39.856 34.608 3;4 6.9781E-15 51780 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 115.37 105.32 426520000 362940000 24377000 39208000 0 0 0 0 0 0 0 0 0 0 0 0 35183 1538 31809 294280;294281;294282;294283;294284;294285;294286;294287;294288 232971;232972;232973;232974;232975;232976;232977 232974 2445;2446;2447 5 MHDAFEPVPILEK Unmodified 1524.7647 0.76465068 3891 Q96JC1 VPS39 Vam6/Vps39-like protein yes yes 0 0 0 By MS/MS 2 0 1 1 80.875 78.347 3 0.016682 95078 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 39.561 31.247 5036200 0 0 5036200 0 0 0 0 0 0 0 0 0 0 0 0 35184 3891 31810 294289 232978 232978 1 MHDLNTDQENLVGTHDAPIR Oxidation (M) 2291.0601 0.060057435 355 O43684 BUB3 Mitotic checkpoint protein BUB3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 2 1 1 1 1 2 2 2 2 2 1 51.404 51.568 3;4 9.1487E-38 57180 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 109.89 107.17 872790000 0 0 0 40108000 11991000 34763000 39774000 0 36069000 110920000 164210000 133140000 88928000 100890000 112000000 35185 355 31811 294290;294291;294292;294293;294294;294295;294296;294297;294298;294299;294300;294301;294302;294303;294304;294305;294306 232979;232980;232981;232982;232983;232984;232985;232986;232987;232988;232989;232990;232991;232992;232993;232994;232995;232996;232997;232998;232999;233000;233001 232986 444 23 MHDLNTDQENLVGTHDAPIR Unmodified 2275.0651 0.065142812 355 O43684 BUB3 Mitotic checkpoint protein BUB3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 55.801 55.926 3;4 3.0935E-10 63571 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 72.968 65.27 808300000 0 0 0 14408000 8688200 33168000 23413000 51914000 30980000 60886000 84025000 91250000 39579000 71696000 298300000 35186 355 31811 294307;294308;294309;294310;294311;294312;294313;294314;294315;294316;294317;294318;294319;294320;294321;294322;294323;294324;294325;294326;294327;294328;294329;294330 233002;233003;233004;233005;233006;233007;233008;233009;233010;233011;233012;233013;233014;233015;233016;233017;233018;233019;233020;233021;233022;233023 233014 20 MHFESGSTLK Oxidation (M) 1151.5281 0.52810881 1020 P15374 UCHL3 Ubiquitin carboxyl-terminal hydrolase isozyme L3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 6 2 2 2 22.995 19.06 2;3 0.00067458 27284 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 169.09 144.93 693070000 306480000 173060000 213540000 0 0 0 0 0 0 0 0 0 0 0 0 35187 1020 31812 294331;294332;294333;294334;294335;294336 233024;233025;233026;233027;233028;233029 233026 1417 3 MHFESGSTLK Unmodified 1135.5332 0.53319418 1020 P15374 UCHL3 Ubiquitin carboxyl-terminal hydrolase isozyme L3 yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 1 2 36.881 32.451 2 1.5069E-11 40501 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 160.59 138.09 322820000 253070000 0 69748000 0 0 0 0 0 0 0 0 0 0 0 0 35188 1020 31812 294337;294338;294339 233030;233031;233032;233033;233034 233033 5 MHGGGPPSGDSACPLRTIK Unmodified 1936.9247 0.92474993 1179 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 0 0 1 By MS/MS 2 0 1 1 49.799 41.898 3 0.0036135 57945 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.085 34.542 5970400 5970400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35189 1179 31813 294340 233035 233035 1 MHGGGPPSGDSACPLRTIK Acetyl (Protein N-term);Oxidation (M) 1994.9302 0.93022924 1179 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 1 1 1 By MS/MS 2 0 1 1 54.702 46.593 3 1.9082E-05 63848 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.152 60.12 9601900 9601900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35190 1179 31813 294341 233036 233036 1708 1 MHGGGPSVTAGVPLK Unmodified 1406.734 0.73401926 2971 Q6UB35 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 57.306 49.126 3 0.0036597 66911 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.088 34.7 21579000 21579000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35191 2971 31814 294342 233037 233037 1 MHGGGPTVTAGLPLPK Unmodified 1531.8181 0.81808324 953 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.94 3.84 6 1 11 2 3 2 1 1 1 1 1 1 1 1 1 1 1 70.277 68.354 2;3 2.735E-08 88401 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.1 104.71 1195000000 607440000 397660000 63025000 0 5382300 12250000 7194700 12115000 10412000 10245000 10536000 13202000 6498200 11281000 27715000 35192 953 31815 294343;294344;294345;294346;294347;294348;294349;294350;294351;294352;294353;294354;294355;294356;294357;294358;294359;294360 233038;233039;233040;233041;233042;233043;233044;233045;233046;233047;233048;233049;233050;233051;233052;233053;233054;233055;233056 233043 13 MHGGGPTVTAGLPLPK Oxidation (M) 1547.813 0.81299786 953 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching 5.57 3.85 6 2 6 3 2 3 1 1 1 1 1 1 68.745 65.851 2;3 5.6311E-06 81951 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 99.752 71.547 818920000 470230000 221630000 108210000 0 0 0 2066600 2193500 2609400 3713000 0 0 0 3371500 4904000 35193 953 31815 294361;294362;294363;294364;294365;294366;294367;294368;294369;294370;294371;294372;294373;294374 233057;233058;233059;233060;233061;233062;233063;233064;233065;233066;233067;233068 233068 1233 11 MHGMSFDVK Oxidation (M) 1066.4576 0.4575864 1238 P28715 ERCC5 DNA repair protein complementing XP-G cells yes yes 0 1 0 By MS/MS 2 0 1 1 43.701 36.908 2 0.039654 50749 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.981 36.241 11958000 11958000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35194 1238 31816 294375 233069 233069 1 MHHGTGPQNVQHQLQR Acetyl (Protein N-term) 1908.9125 0.91254576 3915 Q96L91 EP400 E1A-binding protein p400 yes yes 1 0 0 By MS/MS 10 0 1 1 28.902 29.056 3 0.0020204 31396 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 43.184 35.592 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35195 3915 31817 294376 233070 233070 1 MHILEETSAEPSLQAK Unmodified 1782.8822 0.88219964 3728 Q969V6 MKL1 MKL/myocardin-like protein 1 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 59.592 59.985 3 0.024022 67648 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 28.998 17.524 9234200 0 0 0 0 0 0 0 0 0 0 0 0 2538500 0 6695800 35196 3728 31818 294377;294378 233071 233071 1 MHIQSAVSK Unmodified 999.51715 0.51715019 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 20.051 19.471 2 0.0039527 19928 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 97.431 75.299 126110000 0 36436000 16720000 4279900 3720500 3765100 4124800 4794900 3317500 7828200 7370300 9912400 6654000 5519500 11667000 35197 3443 31819 294379;294380;294381;294382;294383;294384;294385;294386;294387;294388;294389;294390;294391;294392;294393 233072;233073;233074;233075;233076;233077;233078;233079;233080;233081;233082;233083;233084;233085;233086 233086 13 MHIQSAVSK Oxidation (M) 1015.5121 0.51206481 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8.9472 8.4193 2 0.00035966 13463 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 149.72 110.93 104740000 34293000 23248000 12967000 1946900 1984700 1710500 1853300 1288700 1812600 1780300 7969500 4936900 3288200 3307400 2355300 35198 3443 31819 294394;294395;294396;294397;294398;294399;294400;294401;294402;294403;294404;294405;294406;294407;294408 233087;233088;233089;233090;233091;233092;233093;233094;233095;233096;233097;233098;233099;233100;233101 233094 4983 14 MHLREGEFEK Unmodified 1274.6078 0.60775611 1838 P61201 COPS2 COP9 signalosome complex subunit 2 yes yes 0 0 1 By matching By MS/MS By MS/MS 10 0 3 1 1 1 28.759 29.266 3 0.006418 30307 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.44 32.477 30482000 0 0 0 0 0 0 0 0 3221700 0 0 9401600 0 0 17858000 35199 1838 31820 294409;294410;294411 233102;233103;233104 233102 3 MHLREGEFEK Oxidation (M) 1290.6027 0.60267073 1838 P61201 COPS2 COP9 signalosome complex subunit 2 yes yes 0 1 1 By MS/MS 2 0 1 1 24.307 19.331 3 0.023073 27395 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.092 31.33 118240000 118240000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35200 1838 31820 294412 233105 233105 1 MHLYLGAAK Oxidation (M) 1018.527 0.52698659 2231;180 Q13085;O00763 ACACA;ACACB Acetyl-CoA carboxylase 1;Biotin carboxylase;Acetyl-CoA carboxylase 2;Biotin carboxylase no no 0 1 0 By MS/MS 2 0 1 1 39.584 32.961 2 0.0066073 45784 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 92.467 68.698 20072000 20072000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35201 2231;180 31821 294413 233106 233106 250 1 MHNQIPQVTSDGK Unmodified 1453.6984 0.69836203 3608 Q92499 DDX1 ATP-dependent RNA helicase DDX1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 31.61 32.319 2;3 0.0011998 34157 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.825 36.312 30297000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30297000 35202 3608 31822 294414;294415;294416 233107;233108;233109 233108 3 MHNQIPQVTSDGK Oxidation (M) 1469.6933 0.69327665 3608 Q92499 DDX1 ATP-dependent RNA helicase DDX1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 27.3 27.484 3 0.001803 29299 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 47.47 41.469 59770000 0 0 0 0 9381600 0 9449000 9728700 8095600 0 13009000 0 0 0 10106000 35203 3608 31822 294417;294418;294419;294420;294421;294422 233110;233111;233112;233113 233112 5102 1 MHPTPASHPK Oxidation (M) 1117.5339 0.53386288 5023 Q9UMZ2 SYNRG Synergin gamma yes yes 0 1 0 By MS/MS 2 0 1 1 6.2752 2.843 2 0.015508 5805 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.221 54.947 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35204 5023 31823 294423 233114 233114 6364 1 MHQPPESTAAAAAAADISARK Acetyl (Protein N-term) 2135.043 0.042950807 2565 Q15714 TSC22D1 TSC22 domain family protein 1 yes yes 1 0 1 By MS/MS By MS/MS 2 0 2 1 1 72.595 68.376 3 7.9203E-05 86487 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.939 52.58 17912000 0 14373000 3539700 0 0 0 0 0 0 0 0 0 0 0 0 35205 2565 31824 294424;294425 233115;233116 233115 2 MHRDSCPLDCK Acetyl (Protein N-term) 1459.6006 0.6006386 2017 P84103 SRSF3 Serine/arginine-rich splicing factor 3 yes yes 1 0 1 By matching By MS/MS 2 0 2 1 1 32.325 27.611 2 0.032568 34634 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 45.368 36.505 11983000 7913400 0 4069300 0 0 0 0 0 0 0 0 0 0 0 0 35206 2017 31825 294426;294427 233117 233117 1 MHSEAEESK Acetyl (Protein N-term) 1088.4444 0.44443876 651 O95379 TNFAIP8 Tumor necrosis factor alpha-induced protein 8 yes yes 1 0 0 By MS/MS 2 0 1 1 11.566 8.2873 2 1.9193E-11 11360 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 187 176.59 22191000 0 22191000 0 0 0 0 0 0 0 0 0 0 0 0 0 35207 651 31826 294428 233118 233118 1 MHSLATAAPVPTTLAQVDREK Acetyl (Protein N-term);Oxidation (M) 2293.1736 0.17363063 3635 Q92600 RQCD1 Cell differentiation protein RCD1 homolog yes yes 1 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 74.959 74.392 3 9.8544E-108 94638 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 180.31 167.28 497680000 23083000 0 0 21109000 31457000 28013000 34345000 34940000 34439000 57805000 43128000 53404000 40726000 44448000 50781000 35208 3635 31827 294429;294430;294431;294432;294433;294434;294435;294436;294437;294438;294439;294440;294441 233119;233120;233121;233122;233123;233124;233125;233126;233127;233128;233129;233130;233131;233132;233133;233134;233135;233136 233126 5141 18 MHSLATAAPVPTTLAQVDREK Acetyl (Protein N-term) 2277.1787 0.17871601 3635 Q92600 RQCD1 Cell differentiation protein RCD1 homolog yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 80.353 79.588 3 1.655E-92 101015 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 163.45 159 151050000 51039000 0 3960000 0 0 6745400 3817800 11545000 6689200 8916600 7001900 10938000 5977500 10560000 23860000 35209 3635 31827 294442;294443;294444;294445;294446;294447;294448;294449;294450;294451;294452;294453 233137;233138;233139;233140;233141;233142;233143;233144;233145;233146;233147;233148;233149;233150 233144 14 MHSLDEPLDLK Acetyl (Protein N-term);Oxidation (M) 1354.6439 0.64386684 4261 Q9BZE0 GLIS2 Zinc finger protein GLIS2 yes yes 1 1 0 By MS/MS 10 0 1 1 66.75 66.236 2 0.01054 76366 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 87.308 57.834 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35210 4261 31828 294454 233151 233151 5722 1 MHSPQTSAMLFTVDNEAGK 2 Oxidation (M) 2094.935 0.93503984 1578 P49588 AARS Alanine--tRNA ligase, cytoplasmic yes yes 0 2 0 By MS/MS By MS/MS By MS/MS 2.07 0.258 13 1 5 3 6 62.978 57.063 2;3 2.9002E-68 75171 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 146.88 136.4 918910000 441550000 174650000 302710000 0 0 0 0 0 0 0 0 0 0 0 0 35211 1578 31829 294455;294456;294457;294458;294459;294460;294461;294462;294463;294464;294465;294466;294467;294468 233152;233153;233154;233155;233156;233157;233158;233159;233160;233161;233162;233163;233164;233165;233166;233167;233168;233169 233158 2536;2537 17 MHSPQTSAMLFTVDNEAGK Oxidation (M) 2078.9401 0.94012522 1578 P49588 AARS Alanine--tRNA ligase, cytoplasmic yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 3.46 2.94 17 3 4 9 6 5 1 1 1 1 68.151 63.314 2;3 1.467E-90 86872 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 184.02 175.61 2640500000 1785800000 535410000 290350000 0 0 4118900 0 0 0 2559200 0 0 3197800 0 19022000 35212 1578 31829 294469;294470;294471;294472;294473;294474;294475;294476;294477;294478;294479;294480;294481;294482;294483;294484;294485;294486;294487;294488;294489;294490;294491;294492 233170;233171;233172;233173;233174;233175;233176;233177;233178;233179;233180;233181;233182;233183;233184;233185;233186;233187;233188;233189;233190;233191;233192;233193;233194;233195;233196;233197;233198 233171 2536;2537 28 MHSPQTSAMLFTVDNEAGK Unmodified 2062.9452 0.9452106 1578 P49588 AARS Alanine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.15 3.84 7 1 5 4 3 1 1 1 1 1 1 74.54 71.283 2;3 1.1027E-243 91323 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 258.41 236.66 2485600000 1788500000 503990000 136450000 0 0 2893700 0 0 0 0 5648600 7099700 0 6758200 34274000 35213 1578 31829 294493;294494;294495;294496;294497;294498;294499;294500;294501;294502;294503;294504;294505 233199;233200;233201;233202;233203;233204;233205;233206;233207;233208;233209;233210;233211;233212 233200 14 MHTISVPYSVMK Oxidation (M) 1407.689 0.6890429 4808 Q9P265 DIP2B Disco-interacting protein 2 homolog B yes yes 0 1 0 By MS/MS 2 0 1 1 71.715 63.477 3 0.0065012 84351 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.286 40.027 7848700 7848700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35214 4808 31830 294506 233213 233213 6170 1 MHTISVPYSVMK Unmodified 1391.6941 0.69412828 4808 Q9P265 DIP2B Disco-interacting protein 2 homolog B yes yes 0 0 0 By MS/MS 2 0 1 1 77.318 69.188 3 0.00038686 91137 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.385 56.536 11341000 11341000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35215 4808 31830 294507 233214 233214 1 MIAAPEIPTDFNLLQESETHFSSDTDFEDIEGK Acetyl (Protein N-term) 3767.7036 0.70363273 3326 Q8N3U4 STAG2 Cohesin subunit SA-2 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 99.971 94.882 3 1.4325E-21 118345 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.884 65.412 40718000 13184000 25058000 2476400 0 0 0 0 0 0 0 0 0 0 0 0 35216 3326 31831 294508;294509;294510 233215;233216;233217;233218 233215 4 MIAAPEIPTDFNLLQESETHFSSDTDFEDIEGK Acetyl (Protein N-term);Oxidation (M) 3783.6985 0.69854735 3326 Q8N3U4 STAG2 Cohesin subunit SA-2 yes yes 1 1 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 98.245 95.342 3 1.5559E-62 113931 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 103.07 96.323 30567000 0 17597000 12970000 0 0 0 0 0 0 0 0 0 0 0 0 35217 3326 31831 294511;294512 233219;233220 233219 4919 2 MIAAVDTDSPR Oxidation (M) 1190.5601 0.56013721 2140 Q07812 BAX Apoptosis regulator BAX yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 30.975 31.057 2 0.010093 34099 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 62.823 19.577 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35218 2140 31832 294513;294514;294515;294516 233221;233222;233223;233224 233221 3445 4 MIAGQVLDINLAAEPK Oxidation (M) 1697.9022 0.9022068 851 P07910 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 2 1 1 2 2 2 1 1 2 1 1 82.168 82.229 2;3 2.3388E-36 94759 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 156.69 114.59 618870000 0 0 0 7847400 32136000 42315000 25856000 29430000 39739000 92058000 64101000 69392000 52533000 53088000 110380000 35219 851 31833 294517;294518;294519;294520;294521;294522;294523;294524;294525;294526;294527;294528;294529;294530;294531;294532;294533 233225;233226;233227;233228;233229;233230;233231;233232;233233;233234;233235;233236;233237;233238 233228 1075 13 MIAGQVLDINLAAEPK Unmodified 1681.9073 0.90729217 851 P07910 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 85.408 85.541 2 3.1776E-08 99080 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 90.614 65.397 25769000 0 0 0 0 0 0 0 0 0 5486300 4121500 0 2065400 4082700 10013000 35220 851 31833 294534;294535;294536;294537;294538;294539;294540 233239;233240;233241;233242;233243;233244;233245 233240 7 MIAILTENYGGK Oxidation (M) 1324.6697 0.66968766 1209 P26639 TARS Threonine--tRNA ligase, cytoplasmic yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 65.43 65.584 2 1.9774E-08 74245 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 131.44 111.65 67055000 0 0 0 1752200 0 0 0 0 0 5538700 17867000 16223000 0 0 25674000 35221 1209 31834 294541;294542;294543;294544;294545;294546 233246;233247;233248;233249;233250;233251 233247 1771 6 MIAILTENYGGK Unmodified 1308.6748 0.67477304 1209 P26639 TARS Threonine--tRNA ligase, cytoplasmic yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 74.785 74.905 2 1.0693E-22 85872 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 150.08 121.68 62500000 0 0 0 0 1199400 0 2407300 0 0 2902400 9304700 10018000 0 4926000 31742000 35222 1209 31834 294547;294548;294549;294550;294551;294552;294553 233252;233253;233254;233255 233252 3 MIALFNK Acetyl (Protein N-term) 877.47316 0.47316011 3759 Q96BM9 ARL8A ADP-ribosylation factor-like protein 8A yes yes 1 0 0 By MS/MS 2 0 1 1 96.203 91.381 2 0.0069372 113263 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.669 69.111 7352600 0 7352600 0 0 0 0 0 0 0 0 0 0 0 0 0 35223 3759 31835 294554 233256 233256 1 MIANEQK Oxidation (M) 848.4062 0.40620276 3157 Q86UV5 USP48 Ubiquitin carboxyl-terminal hydrolase 48 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 31.755 31.813 1 0.026127 34425 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 53.71 18.509 14177000 0 0 0 2639500 2520500 0 0 0 0 0 0 6393900 0 2622700 0 35224 3157 31836 294555;294556;294557;294558 233257 233257 0 MIAPEGSLVFHEK Oxidation (M) 1472.7334 0.73335055 1554 P48739 PITPNB Phosphatidylinositol transfer protein beta isoform yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 58.987 59.18 3 0.00071309 67713 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 58.32 52.478 79144000 0 0 0 0 3496000 11978000 0 0 0 7635100 12653000 10384000 0 10584000 22413000 35225 1554 31837 294559;294560;294561;294562;294563;294564;294565 233258;233259;233260;233261;233262;233263;233264;233265 233259 2469 8 MIAPEGSLVFHEK Unmodified 1456.7384 0.73843593 1554 P48739 PITPNB Phosphatidylinositol transfer protein beta isoform yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.085 67.169 3 0.01115 76044 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 28.727 20.623 108420000 0 0 0 3089700 1812700 9582900 3038400 3503500 3541900 8840500 12244000 9440600 5332400 9659300 38330000 35226 1554 31837 294566;294567;294568;294569;294570;294571;294572;294573;294574;294575;294576;294577 233266;233267;233268;233269;233270 233267 5 MIASDSHRPEVK Unmodified 1368.682 0.68198369 4742 Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 18.803 17.854 3 0.00011196 15901 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.089 39.539 216050000 76275000 8864600 5740000 8490000 13364000 0 8618400 9123900 0 0 0 26732000 21282000 14179000 23384000 35227 4742 31838 294578;294579;294580;294581;294582;294583;294584;294585;294586;294587;294588 233271;233272;233273;233274;233275;233276 233272 4 MICEYSEEVTPIAVEMTQHLAMTFNQVIQTGPDEEGSDDK Unmodified 4542.0223 0.022282809 649 O95373 IPO7 Importin-7 yes yes 0 0 0 By MS/MS 2 0 1 1 101.85 93.716 4 1.1928E-28 120611 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.127 62.893 13326000 13326000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35228 649 31839 294589 233277 233277 1 MICQQVEAIK Unmodified 1218.6101 0.6100643 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 0 By MS/MS 2 0 1 1 53.38 47.588 2 0.00089685 61723 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.52 76.091 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35229 1601 31840 294590 233278 233278 1 MIDAGDALIYMEPEK Oxidation (M) 1710.7845 0.78445943 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.06 2.58 2 15 1 1 1 2 2 1 2 2 1 1 2 1 78.442 78.14 2 8.4397E-10 94655 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 92.19 86.345 324900000 0 249140000 1988600 0 0 4432100 4892400 5474300 3646600 10944000 13297000 7907400 2362400 10355000 10461000 35230 4819 31841 294591;294592;294593;294594;294595;294596;294597;294598;294599;294600;294601;294602;294603;294604;294605;294606;294607 233279;233280;233281;233282;233283;233284;233285;233286;233287;233288 233280 6188;6189 8 MIDAGDALIYMEPEK Unmodified 1694.7895 0.7895448 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.18 3.74 3 1 7 1 2 1 1 1 1 1 1 1 1 86.056 84.447 2 1.7972E-40 104736 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 146.07 118.06 383850000 21954000 296580000 5312500 0 0 8734200 0 5810900 0 5168900 6218700 8507200 0 6480800 19078000 35231 4819 31841 294608;294609;294610;294611;294612;294613;294614;294615;294616;294617;294618 233289;233290;233291;233292;233293;233294;233295;233296;233297;233298;233299;233300;233301;233302 233290 14 MIDAGDALIYMEPEK 2 Oxidation (M) 1726.7794 0.77937405 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 70.183 69.657 2 4.2494E-38 86877 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.45 134.4 110510000 0 70817000 0 3033600 0 0 5103300 0 0 8239300 5727300 8485100 0 4185900 4922100 35232 4819 31841 294619;294620;294621;294622;294623;294624;294625;294626 233303;233304;233305;233306;233307;233308;233309;233310;233311 233305 6188;6189 9 MIDAVVTSR Unmodified 990.51682 0.51681584 3133 Q86TB9 PATL1 Protein PAT1 homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.689 42.865 2 0.0042902 48201 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 87.308 31.297 327490000 0 0 0 22248000 17757000 28648000 16839000 26161000 18737000 27899000 43403000 36813000 29837000 30892000 28250000 35233 3133 31842 294627;294628;294629;294630;294631;294632;294633;294634;294635;294636;294637;294638 233312;233313;233314;233315;233316;233317;233318;233319;233320 233312 8 MIDAVVTSR Oxidation (M) 1006.5117 0.51173046 3133 Q86TB9 PATL1 Protein PAT1 homolog 1 yes yes 0 1 0 By MS/MS 10 0 1 1 33.417 33.572 2 0.016551 36816 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 79.906 23.896 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35234 3133 31842 294639 233321 233321 4752 1 MIDAVVTSRSEDDETK Oxidation (M) 1810.8255 0.82547262 3133 Q86TB9 PATL1 Protein PAT1 homolog 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 32.895 33.091 2;3 4.0125E-05 36089 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 85.288 69.035 105340000 0 0 0 0 13152000 11385000 16156000 18607000 0 13696000 0 22189000 0 0 10156000 35235 3133 31843 294640;294641;294642;294643;294644;294645;294646;294647 233322;233323;233324;233325;233326;233327;233328;233329;233330;233331 233327 4752 9 MIDAVVTSRSEDDETK Unmodified 1794.8306 0.830558 3133 Q86TB9 PATL1 Protein PAT1 homolog 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.202 40.381 3 4.3243E-06 44588 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 79.346 66.964 261020000 0 0 0 10559000 16947000 11519000 18192000 24738000 17179000 31769000 24187000 26739000 25106000 24166000 29919000 35236 3133 31843 294648;294649;294650;294651;294652;294653;294654;294655;294656;294657;294658;294659 233332;233333;233334;233335;233336;233337;233338;233339;233340;233341;233342;233343;233344;233345;233346 233340 14 MIDEAEVLEFPMVVK 2 Oxidation (M) 1780.8627 0.86270975 4996 Q9ULI2 RIMKLB Beta-citrylglutamate synthase B yes yes 0 2 0 By MS/MS 2 0 1 1 91.92 87.01 2 0.01934 108017 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 46.955 24.951 15609000 0 15609000 0 0 0 0 0 0 0 0 0 0 0 0 0 35237 4996 31844 294660 233347 233347 6337;6338 1 MIDEAEVLEFPMVVK Oxidation (M) 1764.8678 0.86779512 4996 Q9ULI2 RIMKLB Beta-citrylglutamate synthase B yes yes 0 1 0 By MS/MS 2 0 1 1 94.315 89.419 2 0.00052203 111038 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.23 57.032 14502000 0 14502000 0 0 0 0 0 0 0 0 0 0 0 0 0 35238 4996 31844 294661 233348 233348 6337;6338 1 MIDIEGK Unmodified 804.40514 0.40514012 3518 Q8TEQ6 GEMIN5 Gem-associated protein 5 yes yes 0 0 0 By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 37.786 37.883 2 0.049915 40689 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 63.301 7.2107 61769000 0 0 0 2843700 3539000 6132400 5289900 4997600 2350700 9236200 0 10004000 8337000 9038200 0 35239 3518 31845 294662;294663;294664;294665;294666;294667;294668;294669;294670;294671 233349 233349 1 MIDIQTR Unmodified 875.45349 0.4534873 358 O43709 WBSCR22 Probable 18S rRNA (guanine-N(7))-methyltransferase yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 39.446 39.492 2 0.021005 43595 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 107.43 42.867 135060000 0 0 0 22208000 24594000 0 0 22084000 0 0 25260000 0 23208000 17703000 0 35240 358 31846 294672;294673;294674;294675;294676;294677 233350;233351;233352 233350 3 MIDLIIPR Oxidation (M) 985.56304 0.56303775 1749 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 77.592 77.674 2 0.0084874 89171 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.616 64.269 28300000 0 0 0 0 3218300 0 0 0 3681500 5621200 0 7175600 0 0 8603500 35241 1749 31847 294678;294679;294680;294681;294682;294683;294684;294685;294686;294687 233353;233354;233355;233356;233357;233358;233359;233360;233361 233356 2843 9 MIDMGFEPDVQK Unmodified 1408.6367 0.63667298 4168 Q9BUQ8 DDX23 Probable ATP-dependent RNA helicase DDX23 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 74.12 74.292 2 0.00061664 85142 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.943 64.896 30759000 0 0 0 0 0 3591000 2142400 0 0 0 5279500 3717800 3026500 4521100 8480400 35242 4168 31848 294688;294689;294690;294691;294692;294693;294694;294695 233362;233363;233364;233365;233366 233363 5 MIDMGFEPDVQK 2 Oxidation (M) 1440.6265 0.62650222 4168 Q9BUQ8 DDX23 Probable ATP-dependent RNA helicase DDX23 yes yes 0 2 0 By MS/MS By MS/MS 10 0 2 1 1 50.665 50.379 2 0.010437 57688 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 53.756 42.592 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35243 4168 31848 294696;294697 233367;233368 233368 5662;5663 2 MIDMGSACR Unmodified 1039.4249 0.42490606 4043 Q99661 KIF2C Kinesin-like protein KIF2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 34.818 35.039 2 0.017618 38639 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 55.531 26.192 23354000 0 0 0 0 1916300 0 2400300 0 0 0 6540100 0 0 4934500 7563300 35244 4043 31849 294698;294699;294700;294701;294702 233369;233370;233371 233369 3 MIDMLAANSGR 2 Oxidation (M) 1209.5482 0.54819232 3041 Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 2 1 1 1 1 2 1 1 2 2 28.958 29.016 2 0.0023356 30823 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 54.608 33.706 117830000 0 0 0 9117600 5301300 7448700 9866700 0 5521100 31024000 11370000 0 38176000 0 0 35245 3041 31850 294703;294704;294705;294706;294707;294708;294709;294710;294711;294712;294713;294714;294715;294716 233372;233373;233374;233375;233376;233377;233378;233379;233380;233381;233382;233383;233384;233385 233377 4657;4658 10 MIDMLAANSGR Oxidation (M) 1193.5533 0.5532777 3041 Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 27 2 3 2 3 1 2 3 3 3 2 2 1 42.226 42.403 2 0.00037077 53607 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 81.163 39.976 146490000 0 0 0 5989000 11436000 7549000 12799000 4568100 9737300 14499000 19585000 27150000 10047000 6950800 16179000 35246 3041 31850 294717;294718;294719;294720;294721;294722;294723;294724;294725;294726;294727;294728;294729;294730;294731;294732;294733;294734;294735;294736;294737;294738;294739;294740;294741;294742;294743 233386;233387;233388;233389;233390;233391;233392;233393;233394;233395;233396;233397;233398;233399;233400;233401;233402;233403;233404;233405;233406;233407;233408;233409;233410;233411;233412 233400 4657;4658 27 MIDMLAANSGR Unmodified 1177.5584 0.55836308 3041 Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 59.089 59.151 2 0.0025684 67401 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 97.565 76.265 130160000 0 0 0 8091500 8605400 0 12229000 15829000 0 18264000 21894000 16874000 13015000 15357000 0 35247 3041 31850 294744;294745;294746;294747;294748;294749;294750;294751;294752;294753;294754 233413;233414;233415;233416;233417;233418;233419;233420;233421;233422;233423;233424 233413 11 MIDMPVER 2 Oxidation (M) 1021.4573 0.45725205 2513 Q15287 RNPS1 RNA-binding protein with serine-rich domain 1 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching 10 0 11 2 2 2 1 1 1 1 1 21.212 21.433 2 0.009859 22300 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 55.531 43.809 48023000 0 0 0 8135300 0 0 9255400 0 0 8160000 4300100 5846500 3279400 5832600 3213700 35248 2513 31851 294755;294756;294757;294758;294759;294760;294761;294762;294763;294764;294765 233425;233426;233427;233428;233429;233430 233427 4133;4134 4 MIDMPVER Unmodified 989.46742 0.4674228 2513 Q15287 RNPS1 RNA-binding protein with serine-rich domain 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.791 52.934 2 0.017826 59791 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 65.038 42.748 379940000 0 0 0 11179000 13200000 37003000 13116000 13628000 13770000 24367000 65858000 61825000 39974000 22681000 63336000 35249 2513 31851 294766;294767;294768;294769;294770;294771;294772;294773;294774;294775;294776;294777 233431;233432;233433;233434;233435;233436;233437;233438 233431 8 MIDVAEPGQR Unmodified 1114.5441 0.54409322 2425 Q14671 PUM1 Pumilio homolog 1 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 41.396 41.91 2 0.005999 45718 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 66.692 46.915 18006000 0 0 0 0 0 0 0 0 0 0 0 10725000 0 7280400 0 35250 2425 31852 294778;294779;294780 233439;233440 233440 2 MIDVAEPGQR Oxidation (M) 1130.539 0.53900784 2425 Q14671 PUM1 Pumilio homolog 1 yes yes 0 1 0 By MS/MS By matching By matching By matching By MS/MS 10 0 6 2 1 1 1 1 32.692 32.904 2 0.023137 36238 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 57.859 28.71 21445000 0 0 0 0 3960000 0 0 4137400 3107800 0 2966200 7273600 0 0 0 35251 2425 31852 294781;294782;294783;294784;294785;294786 233441;233442 233441 1 MIDVAEPGQRK Unmodified 1242.6391 0.63905624 2425 Q14671 PUM1 Pumilio homolog 1 yes yes 0 0 1 By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.5 3.12 3 13 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 33.483 32.729 2;3 0.0052271 35651 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 77.677 70.549 158140000 6881900 13664000 13824000 3227200 4457300 4778400 4186500 7989100 3892300 6657600 6670700 8561100 7524300 5759100 60070000 35252 2425 31853 294787;294788;294789;294790;294791;294792;294793;294794;294795;294796;294797;294798;294799;294800;294801;294802 233443;233444;233445;233446;233447;233448;233449;233450 233447 6 MIDVAEPGQRK Oxidation (M) 1258.634 0.63397086 2425 Q14671 PUM1 Pumilio homolog 1 yes yes 0 1 1 By MS/MS 2 0 1 1 27.311 24.255 3 0.023292 30846 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 40.496 20.193 12654000 0 0 12654000 0 0 0 0 0 0 0 0 0 0 0 0 35253 2425 31853 294803 233451 233451 0 MIDVDSLTDK Oxidation (M) 1151.538 0.53800479 4578 Q9NQW7 XPNPEP1 Xaa-Pro aminopeptidase 1 yes yes 0 1 0 By matching By MS/MS 2 0 2 1 1 59.145 52.108 2 0.0020764 67311 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.4 88.62 61142000 5628700 55513000 0 0 0 0 0 0 0 0 0 0 0 0 0 35254 4578 31854 294804;294805 233452 233452 5982 1 MIDVDSLTDK Unmodified 1135.5431 0.54309017 4578 Q9NQW7 XPNPEP1 Xaa-Pro aminopeptidase 1 yes yes 0 0 0 By MS/MS By matching By MS/MS 6.25 3.77 1 1 2 2 1 1 65.957 63.565 2 0.0034855 80707 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.692 84.057 377540000 0 364020000 0 0 0 0 0 0 0 0 0 3801400 0 0 9726600 35255 4578 31854 294806;294807;294808;294809 233453;233454;233455 233453 3 MIEDAER Oxidation (M) 878.38038 0.38038194 910 P0DN79;P35520 CBS Cystathionine beta-synthase yes no 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 8.5259 8.6597 2 0.04035 6354 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.205 39.792 20103000 0 0 0 0 0 4757300 4501000 0 4507600 2841300 0 0 0 0 3495400 35256 910 31855 294810;294811;294812;294813;294814 233456 233456 1 MIEDSGPGMK Oxidation (M) 1079.4627 0.46273136 4612 Q9NRW7 VPS45 Vacuolar protein sorting-associated protein 45 yes yes 0 1 0 By MS/MS 2 0 2 2 21.106 17.352 2 0.012355 25813 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.825 52.585 12428000 0 12428000 0 0 0 0 0 0 0 0 0 0 0 0 0 35257 4612 31856 294815;294816 233457;233458 233458 6013;6014 2 MIEEAGAIISTR Oxidation (M) 1305.6599 0.65985126 120 O00154 ACOT7 Cytosolic acyl coenzyme A thioester hydrolase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 2 4 2 1 3 3 1 1 55.062 55.032 2;3 3.5153E-09 62963 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 141.95 41.805 3374200000 0 0 0 245720000 414740000 501590000 0 0 4194800 498560000 603390000 1098300000 7702000 0 0 35258 120 31857 294817;294818;294819;294820;294821;294822;294823;294824;294825;294826;294827;294828;294829;294830;294831;294832;294833 233459;233460;233461;233462;233463;233464;233465;233466;233467;233468;233469;233470;233471;233472;233473;233474;233475;233476;233477;233478;233479;233480 233475 158 15 MIEEAGAIISTR Unmodified 1289.6649 0.66493664 120 O00154 ACOT7 Cytosolic acyl coenzyme A thioester hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 26 5 4 3 2 1 2 3 3 1 2 64.394 64.373 2;3 3.2033E-08 73470 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 128.17 29.773 2446100000 0 0 0 162170000 381880000 404210000 7912100 0 4672100 352360000 469470000 634740000 0 7331100 21406000 35259 120 31857 294834;294835;294836;294837;294838;294839;294840;294841;294842;294843;294844;294845;294846;294847;294848;294849;294850;294851;294852;294853;294854;294855;294856;294857;294858;294859 233481;233482;233483;233484;233485;233486;233487;233488;233489;233490;233491;233492;233493;233494;233495;233496;233497;233498;233499;233500;233501;233502;233503;233504;233505;233506;233507;233508;233509;233510;233511;233512;233513;233514;233515;233516;233517;233518;233519 233482 32 MIELHNGEYSQGK Unmodified 1504.698 0.69802768 444 O60911 CTSV Cathepsin L2 yes yes 0 0 0 By MS/MS 10 0 1 1 37.412 36.943 3 0.0091559 41390 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 40.83 33.7 7263000 0 0 0 7263000 0 0 0 0 0 0 0 0 0 0 0 35260 444 31858 294860 233520 233520 1 MIEMAAEK Acetyl (Protein N-term) 963.44054 0.44053935 3047 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme yes yes 1 0 0 By MS/MS 2 0 1 1 71.629 65.901 2 0.04615 83529 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 41.429 28.998 26760000 0 26760000 0 0 0 0 0 0 0 0 0 0 0 0 0 35261 3047 31859 294861 233521 233521 1 MIEQDDFDINTR Unmodified 1495.6613 0.66130782 5075 Q9Y223 GNE Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase;UDP-N-acetylglucosamine 2-epimerase (hydrolyzing);N-acetylmannosamine kinase yes yes 0 0 0 By MS/MS 10 0 1 1 62.637 63.21 2 0.001229 71495 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.417 74.612 6362800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6362800 35262 5075 31860 294862 233522 233522 1 MIESLTK Unmodified 820.43644 0.43644025 5077 Q9Y230 RUVBL2 RuvB-like 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.76 3 1 23 1 2 1 1 2 2 2 2 2 2 2 2 2 2 2 32.931 32.395 1;2 0.020538 35608 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 108.24 50.774 2251900000 83767000 1235200000 31126000 35978000 41911000 62645000 47980000 47980000 34552000 69163000 98022000 129940000 64411000 63880000 205380000 35263 5077 31861 294863;294864;294865;294866;294867;294868;294869;294870;294871;294872;294873;294874;294875;294876;294877;294878;294879;294880;294881;294882;294883;294884;294885;294886;294887;294888;294889 233523;233524;233525;233526;233527;233528;233529;233530;233531;233532;233533;233534;233535;233536 233525 12 MIESLTK Oxidation (M) 836.43135 0.43135487 5077 Q9Y230 RUVBL2 RuvB-like 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.23 3.29 6 1 24 1 4 2 2 2 2 2 2 2 2 2 2 2 2 2 22.702 21.964 1;2 0.0058116 28417 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.65 36.401 1075700000 22953000 521420000 30191000 31698000 26399000 45963000 34420000 31656000 33028000 49576000 52596000 71962000 23917000 40951000 58969000 35264 5077 31861 294890;294891;294892;294893;294894;294895;294896;294897;294898;294899;294900;294901;294902;294903;294904;294905;294906;294907;294908;294909;294910;294911;294912;294913;294914;294915;294916;294917;294918;294919;294920 233537;233538;233539;233540;233541;233542;233543;233544;233545;233546;233547 233540 6464 10 MIETAQVDER Unmodified 1190.5601 0.56013721 4984 Q9UL25 RAB21 Ras-related protein Rab-21 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 32.746 32.766 2 0.0047747 35813 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 71.614 54.838 12912000 0 0 0 6116000 0 0 0 0 0 3996200 0 0 0 2799400 0 35265 4984 31862 294921;294922;294923;294924 233548;233549;233550 233548 3 MIEVVCNDRLGK Unmodified 1432.7167 0.71665463 4271 Q9BZL1 UBL5 Ubiquitin-like protein 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 5 2 1 2 57.144 51.129 2;3 5.4771E-06 63872 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 114.84 95.054 145850000 104580000 15725000 25537000 0 0 0 0 0 0 0 0 0 0 0 0 35266 4271 31863 294925;294926;294927;294928;294929 233551;233552;233553;233554 233553 3 MIEVVCNDRLGK Oxidation (M) 1448.7116 0.71156925 4271 Q9BZL1 UBL5 Ubiquitin-like protein 5 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2 0 5 2 1 2 47.988 42.174 2;3 1.2691E-05 53373 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 105.03 88.37 102610000 43239000 21271000 38101000 0 0 0 0 0 0 0 0 0 0 0 0 35267 4271 31863 294930;294931;294932;294933;294934 233555;233556;233557;233558 233557 5730 3 MIFDVESMK 2 Oxidation (M) 1130.4988 0.49878251 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 6.33 3.93 6 1 8 2 3 2 1 1 1 3 1 1 51.462 48.482 2 0.0046117 56213 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 58.596 45.329 206020000 14578000 137850000 13449000 0 0 13628000 6196300 0 4825900 7687600 0 4316800 0 0 3488800 35268 894 31864 294935;294936;294937;294938;294939;294940;294941;294942;294943;294944;294945;294946;294947;294948;294949 233559;233560;233561;233562;233563;233564;233565;233566;233567;233568 233559 1154;1155 7 MIFDVESMK Oxidation (M) 1114.5039 0.50386789 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 7 28 2 3 2 1 2 3 2 3 2 3 3 3 2 2 2 65.407 64.345 2 0.0050828 69952 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 71.692 47.06 559620000 18599000 353460000 10270000 3232800 5827200 24575000 7177200 13416000 10023000 18591000 24714000 19895000 11642000 11758000 26432000 35269 894 31864 294950;294951;294952;294953;294954;294955;294956;294957;294958;294959;294960;294961;294962;294963;294964;294965;294966;294967;294968;294969;294970;294971;294972;294973;294974;294975;294976;294977;294978;294979;294980;294981;294982;294983;294984 233569;233570;233571;233572;233573;233574;233575;233576;233577;233578;233579;233580;233581;233582;233583;233584;233585;233586;233587;233588;233589;233590;233591;233592;233593;233594;233595;233596;233597 233581 1154;1155 29 MIFDVESMK Unmodified 1098.509 0.50895327 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 77.303 76.088 2 0.0030483 87953 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 91.318 66.395 515660000 22922000 325940000 9410700 4892300 5550100 16107000 7663700 10535000 6386800 15436000 14599000 16658000 0 14872000 44681000 35270 894 31864 294985;294986;294987;294988;294989;294990;294991;294992;294993;294994;294995;294996;294997;294998;294999;295000 233598;233599;233600;233601;233602;233603;233604;233605;233606;233607;233608;233609;233610;233611;233612 233610 15 MIFDVESMKK Unmodified 1226.6039 0.60391628 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 72.395 66.543 3 0.0049982 88037 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.82 49.191 42689000 39128000 0 3560900 0 0 0 0 0 0 0 0 0 0 0 0 35271 894 31865 295001;295002 233613 233613 1 MIFVGIK Oxidation (M) 822.46735 0.46734645 2028 P99999 CYCS Cytochrome c yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 2 58.023 58.299 2 0.016884 64815 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.377 41.385 47951000 0 0 0 3667600 0 0 0 0 0 0 6211600 6204700 0 3877800 27990000 35272 2028 31866 295003;295004;295005;295006;295007;295008 233614;233615;233616 233614 3281 3 MIGEFVSDRK Unmodified 1180.591 0.59104341 3615 Q92538 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 0 0 1 By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 42.651 42.91 3 0.043274 46899 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 20.216 10.419 62093000 0 0 0 0 4190700 0 3895800 8117100 3385700 6840100 4898100 10895000 5445400 4914500 9510800 35273 3615 31867 295009;295010;295011;295012;295013;295014;295015;295016;295017;295018 233617 233617 1 MIGEFVSDRK Oxidation (M) 1196.586 0.58595803 3615 Q92538 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 0 1 1 By MS/MS 2 0 1 1 42.726 35.99 3 0.0029248 49656 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.626 51.712 51018000 51018000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35274 3615 31867 295019 233618 233618 5114 1 MIGFPSSAGSVSPR Oxidation (M) 1407.6816 0.68164933 73;981 CON__P13646-1;P13646 KRT13 Keratin, type I cytoskeletal 13 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 2 1 60.195 60.442 2 2.7097E-19 69142 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 133.89 104.73 + 60123000 0 0 0 0 0 0 17108000 26994000 0 0 0 5200200 10821000 0 0 35275 73;981 31868 295020;295021;295022;295023;295024;295025 233619;233620;233621;233622;233623 233620 95 5 MIGFPSSAGSVSPR Unmodified 1391.6867 0.68673471 73;981 CON__P13646-1;P13646 KRT13 Keratin, type I cytoskeletal 13 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 68.465 68.679 2 2.236E-19 78842 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 136.48 125.95 + 95092000 0 0 0 0 0 0 19750000 49719000 0 0 0 12140000 13482000 0 0 35276 73;981 31868 295026;295027;295028;295029 233624;233625;233626;233627;233628 233625 5 MIGFSETAK Unmodified 982.47937 0.4793677 1504 P46459 NSF Vesicle-fusing ATPase yes yes 0 0 0 By MS/MS 2 0 1 1 52.829 47.056 2 0.016715 61111 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.713 58.766 28764000 0 28764000 0 0 0 0 0 0 0 0 0 0 0 0 0 35277 1504 31869 295030 233629 233629 1 MIICSEEEQNMDLTK Unmodified 1839.8053 0.80527122 3453 Q8NG31 CASC5 Protein CASC5 yes yes 0 0 0 By MS/MS 2 0 1 1 70.783 64.967 2 1.0795E-22 82675 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 142.08 115.41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35278 3453 31870 295031 233630 233630 1 MIIEEAK Oxidation (M) 848.43135 0.43135487 1548 P48643 CCT5 T-complex protein 1 subunit epsilon yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 2 2 1 1 1 1 1 1 1 1 1 1 1 1 20.113 19.172 2 0.015369 19827 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 90.986 28.271 2071400000 86481000 1621500000 64748000 17108000 13582000 31317000 20423000 16118000 11882000 40096000 27798000 29953000 21646000 24627000 44061000 35279 1548 31871 295032;295033;295034;295035;295036;295037;295038;295039;295040;295041;295042;295043;295044;295045;295046;295047;295048 233631;233632;233633;233634;233635;233636;233637;233638;233639;233640;233641;233642;233643;233644;233645 233633 2465 15 MIIEEAK Unmodified 832.43644 0.43644025 1548 P48643 CCT5 T-complex protein 1 subunit epsilon yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.11 3.8 6 1 12 2 3 2 1 1 1 1 1 1 1 1 1 1 1 1 33.305 31.64 1;2 0.023406 34477 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 86.866 29.403 7234600000 175060000 6271400000 54050000 26741000 27736000 72158000 38062000 33101000 22806000 72118000 73886000 83030000 46490000 51595000 186340000 35280 1548 31871 295049;295050;295051;295052;295053;295054;295055;295056;295057;295058;295059;295060;295061;295062;295063;295064;295065;295066;295067 233646;233647;233648;233649;233650;233651;233652;233653;233654;233655;233656;233657;233658;233659;233660;233661;233662 233657 16 MIIENFEALK Oxidation (M) 1222.6268 0.62676022 2786 Q5T8P6 RBM26 RNA-binding protein 26 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 74.945 73.72 2 0.0010616 84869 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 89.886 71.9 269310000 6972000 58680000 16492000 13287000 13280000 20539000 17204000 15399000 16742000 16988000 17307000 21740000 17731000 0 16948000 35281 2786 31872 295068;295069;295070;295071;295072;295073;295074;295075;295076;295077;295078;295079;295080;295081;295082 233663;233664;233665;233666;233667;233668;233669;233670;233671;233672;233673;233674;233675;233676;233677;233678;233679;233680 233676 4422 18 MIIENFEALK Unmodified 1206.6318 0.63184559 2786 Q5T8P6 RBM26 RNA-binding protein 26 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81.356 80.38 2 0.0049264 100303 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.802 70.653 277690000 9925700 99448000 13308000 3703300 5919700 12658000 6475100 12822000 8849100 20494000 12084000 19346000 9588400 10969000 32099000 35282 2786 31872 295083;295084;295085;295086;295087;295088;295089;295090;295091;295092;295093;295094;295095;295096;295097 233681;233682;233683;233684 233681 4 MIINDPR Oxidation (M) 873.43784 0.43783723 494 O75400 PRPF40A Pre-mRNA-processing factor 40 homolog A yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 17 1 2 2 2 1 2 1 2 1 1 1 1 25.116 25.276 2 0.020282 27329 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 74.415 51.793 621200000 0 0 0 28526000 59505000 58003000 93574000 31331000 73131000 42764000 88802000 40517000 38825000 25251000 40970000 35283 494 31873 295098;295099;295100;295101;295102;295103;295104;295105;295106;295107;295108;295109;295110;295111;295112;295113;295114 233685;233686;233687;233688;233689;233690;233691;233692;233693;233694;233695;233696 233688 643 12 MIIPSLEELDSLK Oxidation (M) 1502.7902 0.79019673 4233 Q9BXS6 NUSAP1 Nucleolar and spindle-associated protein 1 yes yes 0 1 0 By MS/MS 2 0 1 1 94.357 89.461 2 0.00023994 110950 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.456 44.876 28666000 0 28666000 0 0 0 0 0 0 0 0 0 0 0 0 0 35284 4233 31874 295115 233697 233697 5709 1 MIIPSLEELDSLK Unmodified 1486.7953 0.79528211 4233 Q9BXS6 NUSAP1 Nucleolar and spindle-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 97.176 93.163 2 2.8593E-10 115006 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.4 70.12 115700000 0 115380000 328210 0 0 0 0 0 0 0 0 0 0 0 0 35285 4233 31874 295116;295117;295118 233698;233699;233700 233698 3 MILASEK Unmodified 790.42588 0.42587556 384 O60231 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 28.383 27.623 2 0.023725 29658 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 84.244 19.467 369960000 0 294430000 14328000 6644700 0 0 0 6206000 0 9389300 14014000 0 7537500 0 17408000 35286 384 31875 295119;295120;295121;295122;295123;295124;295125;295126 233701;233702;233703;233704 233703 4 MILELFSK Oxidation (M) 995.53615 0.5361543 1984 P78417 GSTO1 Glutathione S-transferase omega-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 5.77 3.93 6 1 6 2 3 2 1 1 1 1 1 1 81.089 78.551 2 0.0072484 90135 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.923 17.564 588790000 354520000 127630000 72181000 0 0 0 1386000 0 0 1594500 4747000 5631200 0 3372500 17737000 35287 1984 31876 295127;295128;295129;295130;295131;295132;295133;295134;295135;295136;295137;295138;295139 233705;233706;233707;233708;233709;233710;233711;233712 233706 3207 8 MILELFSK Unmodified 979.54124 0.54123967 1984 P78417 GSTO1 Glutathione S-transferase omega-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 6 4 3 3 1 1 1 1 1 1 87.867 85.272 2 0.01951 108544 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.794 27.589 208580000 143080000 35296000 9858500 1260400 0 0 0 0 0 0 0 0 0 2358600 16720000 35288 1984 31876 295140;295141;295142;295143;295144;295145 233713;233714;233715 233715 3 MILENIPNPDHEVNR Oxidation (M) 1805.873 0.87303193 2831 Q5VZE5 NAA35 N-alpha-acetyltransferase 35, NatC auxiliary subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 16 2 1 2 1 1 3 3 3 60.338 60.43 2;3 7.4794E-10 68748 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 92.866 52.949 305830000 0 0 0 6135100 7848200 17559000 2907000 0 2735100 67005000 78990000 122650000 0 0 0 35289 2831 31877 295146;295147;295148;295149;295150;295151;295152;295153;295154;295155;295156;295157;295158;295159;295160;295161 233716;233717;233718;233719;233720 233717 4488 4 MILENIPNPDHEVNR Unmodified 1789.8781 0.87811731 2831 Q5VZE5 NAA35 N-alpha-acetyltransferase 35, NatC auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 68.456 68.43 3 0.022802 78398 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 29.981 11.385 162580000 0 0 0 2220700 3326300 6019800 0 2499400 0 37100000 44773000 66641000 0 0 0 35290 2831 31877 295162;295163;295164;295165;295166;295167;295168 233721;233722 233721 1 MILIQDGSQNTNVDK Oxidation (M) 1690.8196 0.81959938 3690 Q92945 KHSRP Far upstream element-binding protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.39 3.7 5 1 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 46.782 45.113 2;3 4.2354E-71 50017 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 183 162.71 667140000 17367000 296650000 3347900 20548000 18292000 25394000 25591000 14393000 20939000 32925000 35969000 55080000 31597000 28785000 40261000 35291 3690 31878 295169;295170;295171;295172;295173;295174;295175;295176;295177;295178;295179;295180;295181;295182;295183;295184;295185;295186 233723;233724;233725;233726;233727;233728;233729;233730;233731;233732;233733;233734;233735;233736;233737;233738;233739;233740;233741;233742;233743;233744;233745;233746;233747;233748;233749;233750 233730 5249 28 MILIQDGSQNTNVDK Unmodified 1674.8247 0.82468476 3690 Q92945 KHSRP Far upstream element-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.55 3.6 5 2 15 1 5 1 1 1 2 1 1 1 2 1 1 1 1 2 58.598 56.914 2;3 1.5596E-83 64478 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 186.81 169.79 2886300000 32026000 1875900000 4411400 45030000 47023000 63103000 58407000 57275000 44626000 80268000 114990000 123250000 61791000 75238000 203000000 35292 3690 31878 295187;295188;295189;295190;295191;295192;295193;295194;295195;295196;295197;295198;295199;295200;295201;295202;295203;295204;295205;295206;295207;295208 233751;233752;233753;233754;233755;233756;233757;233758;233759;233760;233761;233762;233763;233764;233765;233766;233767;233768;233769;233770;233771 233769 21 MILIQDGSQNTNVDKPLR Oxidation (M) 2057.0575 0.057538239 3690 Q92945 KHSRP Far upstream element-binding protein 2 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 55.339 55.249 3 6.4403E-05 62599 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 60.564 43.685 22271000 0 0 0 0 6671800 0 10185000 5414300 0 0 0 0 0 0 0 35293 3690 31879 295209;295210;295211 233772;233773;233774 233772 5249 3 MILLEVNNR Oxidation (M) 1116.5961 0.59612879 257 O15144 ARPC2 Actin-related protein 2/3 complex subunit 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 55.484 55.6 2 0.0092388 62057 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 58.917 44.914 12635000 0 0 0 0 0 4659400 3649800 0 0 0 0 0 0 4326300 0 35294 257 31880 295212;295213;295214;295215;295216;295217 233775;233776;233777;233778;233779;233780 233778 343 6 MILLEVNNR Unmodified 1100.6012 0.60121417 257 O15144 ARPC2 Actin-related protein 2/3 complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 69.52 69.584 2 0.010025 80807 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 65.038 47.652 44039000 0 0 0 2951400 2703000 3429800 2367200 2766600 0 2949200 5201400 6132200 0 3750600 11788000 35295 257 31880 295218;295219;295220;295221;295222;295223;295224;295225;295226;295227 233781;233782;233783;233784 233784 4 MILSNPK Unmodified 801.44186 0.44185998 2895 Q6N069 NAA16 N-alpha-acetyltransferase 16, NatA auxiliary subunit yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 31.095 31.256 2 0.024035 33771 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 83.614 56.477 410820000 0 0 0 0 22688000 25951000 32659000 36934000 0 64811000 103670000 124110000 0 0 0 35296 2895 31881 295228;295229;295230;295231;295232;295233;295234 233785;233786;233787;233788;233789 233785 5 MILSNPK Oxidation (M) 817.43677 0.4367746 2895 Q6N069 NAA16 N-alpha-acetyltransferase 16, NatA auxiliary subunit yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 20.579 20.756 2 0.016911 21133 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 80.294 64.795 540210000 0 0 0 18532000 28662000 22896000 39496000 37351000 36148000 81194000 112020000 155320000 0 0 8597600 35297 2895 31881 295235;295236;295237;295238;295239;295240;295241;295242;295243;295244 233790;233791;233792;233793 233792 4530 4 MILTFEK Oxidation (M) 896.46774 0.46774038 3600 Q8WYA6 CTNNBL1 Beta-catenin-like protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 59.611 53.628 2 0.024091 69058 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.068 35.07 138100000 48749000 65314000 24035000 0 0 0 0 0 0 0 0 0 0 0 0 35298 3600 31882 295245;295246;295247 233794 233794 1 MILTFEK Unmodified 880.47283 0.47282576 3600 Q8WYA6 CTNNBL1 Beta-catenin-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.162 65.25 2 0.03326 73731 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.138 22.019 85209000 0 0 0 4508000 3265000 6140000 4734900 4514900 3613400 7118700 8518700 9138600 7715600 7611100 18330000 35299 3600 31882 295248;295249;295250;295251;295252;295253;295254;295255;295256;295257;295258;295259 233795;233796 233795 2 MIMATNRPDTLDPALLRPGR 2 Oxidation (M) 2269.1671 0.16710546 1898 P62333 PSMC6 26S protease regulatory subunit 10B yes yes 0 2 2 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 66.837 66.868 4 0.00011761 76601 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 47.09 44.035 72082000 0 0 0 2827600 3896800 24590000 0 0 4549200 0 7914300 20248000 0 0 8055900 35300 1898 31883 295260;295261;295262;295263;295264;295265;295266 233797;233798 233797 3073;3074 2 MINLSEPDTIDER Oxidation (M) 1547.7137 0.71373732 2421 Q14651 PLS1 Plastin-1 yes yes 0 1 0 By MS/MS By matching 10 0 2 1 1 60.598 60.898 2 0.003128 69475 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 50.108 33.437 4729100 0 0 0 0 0 2706300 0 0 0 0 0 0 0 0 2022800 35301 2421 31884 295267;295268 233799;233800 233799 3973 2 MINLSVPDTIDER Unmodified 1501.7446 0.74464352 986;985 P13797;P13796 PLS3;LCP1 Plastin-3;Plastin-2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.367 79.425 2 4.6907E-09 92001 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 131.43 125.4 405380000 0 0 0 16250000 12646000 35008000 18384000 21467000 16023000 32848000 49247000 41115000 0 38665000 123730000 35302 986;985 31885 295269;295270;295271;295272;295273;295274;295275;295276;295277;295278;295279 233801;233802;233803;233804;233805;233806;233807;233808;233809;233810;233811;233812;233813 233810 12 MINLSVPDTIDER Oxidation (M) 1517.7396 0.73955814 986;985 P13797;P13796 PLS3;LCP1 Plastin-3;Plastin-2 no no 0 1 0 By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.54 75.599 2 8.6981E-33 86581 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 165.66 144.79 486940000 0 0 0 20847000 23404000 49559000 28866000 25274000 24946000 54378000 59940000 66186000 28609000 43712000 61220000 35303 986;985 31885 295280;295281;295282;295283;295284;295285;295286;295287;295288;295289;295290;295291 233814;233815;233816;233817;233818;233819;233820;233821 233815 1330;1337 5 MINLSVPDTIDERAINK Oxidation (M) 1943.9986 0.99862638 986 P13797 PLS3 Plastin-3 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2.29 0.452 5 2 1 4 2 79.221 74.999 2;3 2.999E-74 93599 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 186.17 160.12 962100000 69250000 580690000 312160000 0 0 0 0 0 0 0 0 0 0 0 0 35304 986 31886 295292;295293;295294;295295;295296;295297;295298 233822;233823;233824;233825;233826;233827;233828;233829 233823 1337 7 MINLSVPDTIDERAINK Unmodified 1928.0037 0.0037117545 986 P13797 PLS3 Plastin-3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 1 3 2 82.641 78.32 2;3 2.1864E-26 99111 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 91.616 81.559 1622500000 98172000 1367700000 156620000 0 0 0 0 0 0 0 0 0 0 0 0 35305 986 31886 295299;295300;295301;295302;295303;295304 233830;233831;233832;233833;233834;233835;233836 233833 7 MINLSVPDTIDERAINKK Oxidation (M) 2072.0936 0.093589394 986 P13797 PLS3 Plastin-3 yes yes 0 1 2 By MS/MS 2 0 1 1 77.704 69.573 4 0.00099611 91575 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.463 43.046 16246000 16246000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35306 986 31887 295305 233837 233837 1337 1 MINTDLSR Oxidation (M) 964.46478 0.46478027 1377 P36578 RPL4 60S ribosomal protein L4 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 2 1 1 1 1 1 1 1 2 1 1 26.476 26.645 2 0.0085933 28020 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 73.248 55.863 238750000 0 0 0 10563000 34945000 13301000 13888000 8887900 10243000 14234000 13254000 19345000 72125000 14630000 13331000 35307 1377 31888 295306;295307;295308;295309;295310;295311;295312;295313;295314;295315;295316;295317;295318;295319 233838;233839;233840;233841;233842;233843;233844;233845;233846;233847;233848;233849;233850;233851 233846 2134 10 MINTDLSR Unmodified 948.46987 0.46986564 1377 P36578 RPL4 60S ribosomal protein L4 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.197 35.379 2 0.0060877 37692 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 103.83 81.596 538860000 0 0 0 24554000 23307000 29212000 26116000 30116000 22811000 48096000 49213000 77925000 63557000 58736000 85219000 35308 1377 31888 295320;295321;295322;295323;295324;295325;295326;295327;295328;295329;295330;295331 233852;233853;233854;233855;233856;233857;233858;233859;233860 233857 8 MIPGGLSEAK Acetyl (Protein N-term);Oxidation (M) 1059.527 0.52704617 742 P01040 CSTA Cystatin-A;Cystatin-A, N-terminally processed yes yes 1 1 0 By matching By MS/MS By matching By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 61.255 61.4 1;2 0.0024989 69899 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 48.048 36.399 75085000 0 0 0 8154000 0 0 23826000 5874200 0 0 0 5195400 0 2692100 29343000 35309 742 31889 295332;295333;295334;295335;295336;295337 233861;233862 233861 903 1 MIPGGLSEAK Acetyl (Protein N-term) 1043.5321 0.53213155 742 P01040 CSTA Cystatin-A;Cystatin-A, N-terminally processed yes yes 1 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 75.113 75.291 2 0.0070766 86742 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 46.39 30.891 52811000 0 0 0 0 0 0 0 0 5885800 10330000 16147000 20447000 0 0 0 35310 742 31889 295338;295339;295340;295341 233863;233864 233864 2 MIPGGLSEAK Unmodified 1001.5216 0.52156686 742 P01040 CSTA Cystatin-A;Cystatin-A, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 42.758 42.825 2 0.0040383 48920 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 74.301 50.115 170680000 0 0 0 122180000 9150500 0 6180900 8364300 0 0 15324000 0 0 0 9479300 35311 742 31889 295342;295343;295344;295345;295346;295347 233865 233865 1 MIPGGLSEAK Oxidation (M) 1017.5165 0.51648149 742 P01040 CSTA Cystatin-A;Cystatin-A, N-terminally processed yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 36.106 36.289 2 0.036648 40659 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 60.828 40.347 61919000 0 0 0 46079000 0 0 0 5874700 0 0 0 0 0 3489200 6476700 35312 742 31889 295348;295349;295350;295351 233866 233866 903 0 MIQDGKGDVTITNDGATILK Oxidation (M) 2105.0674 0.067434223 1642 P50991 CCT4 T-complex protein 1 subunit delta yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 63.211 63.353 3 1.4941E-15 72196 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 89.049 79.292 205720000 0 0 0 23427000 0 10783000 24036000 0 9771700 18850000 20876000 44989000 23655000 0 29333000 35313 1642 31890 295352;295353;295354;295355;295356;295357;295358;295359;295360 233867;233868;233869;233870;233871;233872;233873;233874;233875;233876;233877 233870 2644 11 MIQDGKGDVTITNDGATILK Unmodified 2089.0725 0.072519601 1642 P50991 CCT4 T-complex protein 1 subunit delta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.22 2.2 1 8 1 1 1 1 1 1 1 1 1 67.642 67.364 3 0.00012973 76512 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.226 40.313 46315000 0 2988100 0 0 0 0 3725900 4159100 0 4505700 5775100 6230600 3166400 7396500 8367500 35314 1642 31890 295361;295362;295363;295364;295365;295366;295367;295368;295369 233878;233879;233880;233881;233882;233883;233884;233885;233886 233879 9 MIQEVMHSLVK Unmodified 1313.6836 0.68356359 3909 Q96KP1 EXOC2 Exocyst complex component 2 yes yes 0 0 0 By MS/MS 2 0 1 1 78.52 70.39 3 0.0092966 92506 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.257 35.069 23720000 23720000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35315 3909 31891 295370 233887 233887 1 MIQHAVFK Oxidation (M) 988.51642 0.51642191 1826 P61011 SRP54 Signal recognition particle 54 kDa protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 20 1 1 2 2 2 1 2 2 2 2 2 1 22.563 22.794 2 0.0030422 23997 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 130.77 102.25 238250000 0 0 0 9474800 7947000 18042000 20502000 21523000 7547000 30770000 19269000 32410000 37086000 24288000 9386600 35316 1826 31892 295371;295372;295373;295374;295375;295376;295377;295378;295379;295380;295381;295382;295383;295384;295385;295386;295387;295388;295389;295390 233888;233889;233890;233891;233892;233893;233894;233895;233896;233897;233898;233899;233900;233901 233891 2966 14 MIQHAVFK Unmodified 972.52151 0.52150728 1826 P61011 SRP54 Signal recognition particle 54 kDa protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 30.79 30.457 2 0.0046473 45906 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 128.57 93.461 413160000 118540000 0 0 18288000 13242000 22191000 18921000 23912000 15274000 25278000 20547000 30718000 26386000 32978000 46881000 35317 1826 31892 295391;295392;295393;295394;295395;295396;295397;295398;295399;295400;295401;295402;295403 233902;233903;233904;233905;233906;233907;233908;233909;233910;233911;233912 233906 10 MIQPSASGSLVGR Unmodified 1301.6762 0.67617003 509 O75496 GMNN Geminin yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 53.109 52.581 2 0.00078848 59958 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 72.006 42.533 5076200 0 0 0 0 5076200 0 0 0 0 0 0 0 0 0 0 35318 509 31893 295404;295405 233913;233914;233915 233914 3 MIQPSASGSLVGRENELSAGLSK Oxidation (M) 2346.1849 0.1849236 509 O75496 GMNN Geminin yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68.841 68.109 3 1.935E-54 78098 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 111.83 99.531 342170000 62959000 0 9344100 9333400 18339000 23802000 17296000 17253000 21810000 28540000 26608000 34964000 16217000 20224000 35476000 35319 509 31894 295406;295407;295408;295409;295410;295411;295412;295413;295414;295415;295416;295417;295418;295419 233916;233917;233918;233919;233920;233921;233922;233923;233924;233925;233926;233927;233928;233929;233930;233931;233932;233933 233916 656 18 MIQPSASGSLVGRENELSAGLSK Unmodified 2330.19 0.19000897 509 O75496 GMNN Geminin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 72.299 72.533 3 5.5347E-14 82833 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.186 62.171 86900000 0 0 0 0 0 0 0 0 7351000 11127000 13715000 18090000 0 10573000 26044000 35320 509 31894 295420;295421;295422;295423;295424;295425;295426 233934;233935;233936;233937;233938;233939;233940 233935 7 MIQTPDADLDVTNIIQADEPTTLTTNALDLNSVLGK Oxidation (M) 3855.9299 0.92994427 2244 Q13155 AIMP2 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 yes yes 0 1 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 98.59 95.076 3 1.041E-279 114011 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 211.19 205.53 308420000 0 274960000 33460000 0 0 0 0 0 0 0 0 0 0 0 0 35321 2244 31895 295427;295428;295429 233941;233942;233943;233944;233945 233943 3644 5 MIQTPDADLDVTNIIQADEPTTLTTNALDLNSVLGK Unmodified 3839.935 0.93502965 2244 Q13155 AIMP2 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.29 0.452 5 2 1 4 2 98.95 94.792 3;4 1.3316E-257 117205 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 195.67 191.1 360620000 14005000 326790000 19824000 0 0 0 0 0 0 0 0 0 0 0 0 35322 2244 31895 295430;295431;295432;295433;295434;295435;295436 233946;233947;233948;233949;233950;233951;233952;233953 233947 8 MISAAQLLDELMGR Acetyl (Protein N-term);2 Oxidation (M) 1620.7851 0.78512813 630 O95232 LUC7L3 Luc7-like protein 3 yes yes 1 2 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 98.652 98.807 2 8.228E-09 114908 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 94.616 90.729 7579000 0 0 0 0 0 0 0 0 0 3195100 2822100 0 0 0 1561900 35323 630 31896 295437;295438;295439 233954;233955;233956 233954 768;769 3 MISAEAPVLFAK Unmodified 1275.6897 0.68969482 2359 Q13952 NFYC Nuclear transcription factor Y subunit gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 80.764 79.502 2 0.00056515 92051 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 77.677 56.171 482130000 21446000 394940000 8180400 0 1929300 4050200 2424300 5236700 0 7187500 7674700 5306100 3328500 5883100 14541000 35324 2359 31897 295440;295441;295442;295443;295444;295445;295446;295447;295448;295449;295450;295451;295452;295453 233957;233958;233959;233960;233961;233962;233963;233964;233965;233966;233967;233968;233969 233958 13 MISAEAPVLFAK Oxidation (M) 1291.6846 0.68460945 2359 Q13952 NFYC Nuclear transcription factor Y subunit gamma yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 6.56 3.86 3 1 5 1 2 1 1 1 1 1 1 77.506 75.815 2 0.00013898 87404 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 84.213 71.423 153980000 0 115220000 9459100 0 0 0 9763500 0 0 8106200 0 0 0 0 11438000 35325 2359 31897 295454;295455;295456;295457;295458;295459;295460;295461;295462 233970;233971;233972;233973;233974;233975;233976;233977 233970 3842 8 MISDAIPELK Oxidation (M) 1131.5846 0.58456105 1423 P40926 MDH2 Malate dehydrogenase, mitochondrial yes yes 0 1 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 70.817 66.15 2 0.0050638 81626 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 84.615 66.29 240260000 0 230810000 9447000 0 0 0 0 0 0 0 0 0 0 0 0 35326 1423 31898 295463;295464;295465 233978;233979;233980 233980 2239 3 MISDAIPELK Unmodified 1115.5896 0.58964643 1423 P40926 MDH2 Malate dehydrogenase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 74.034 72.786 2 0.0033888 90672 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.502 72.482 769510000 0 721340000 5388500 12638000 0 0 0 8429300 0 0 0 0 0 7342300 14375000 35327 1423 31898 295466;295467;295468;295469;295470;295471 233981;233982;233983;233984;233985;233986 233982 6 MISEELVAASR Unmodified 1204.6122 0.61217279 4876 Q9UFC0 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching 10 0 7 1 1 1 1 1 1 1 58.727 58.919 2 0.011375 66649 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.602 37.794 21617000 0 0 0 2128100 0 0 2297800 2872800 0 0 3758300 3191500 2224000 0 5144300 35328 4876 31899 295472;295473;295474;295475;295476;295477;295478 233987;233988 233988 2 MISEGLDPDLLERPDAPVPDGESEK Oxidation (M) 2724.28 0.28000577 5155 Q9Y3C0 CCDC53 WASH complex subunit CCDC53 yes yes 0 1 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 82.866 77.483 3 2.7493E-25 98685 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.903 89.871 40202000 8200700 32002000 0 0 0 0 0 0 0 0 0 0 0 0 0 35329 5155 31900 295479;295480;295481 233989;233990;233991 233991 6532 3 MISEGLDPDLLERPDAPVPDGESEK Unmodified 2708.2851 0.28509115 5155 Q9Y3C0 CCDC53 WASH complex subunit CCDC53 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 84.443 80.825 3 0.00032499 100462 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 43.241 30.938 34288000 0 30719000 3568500 0 0 0 0 0 0 0 0 0 0 0 0 35330 5155 31900 295482;295483 233992;233993 233992 2 MISLSYSR Oxidation (M) 971.47462 0.47461667 308 O43242 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 44.691 45.147 2 0.023033 50110 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 52.786 37.154 21461000 0 0 0 0 0 0 0 0 0 6669000 7062500 7729900 0 0 0 35331 308 31901 295484;295485;295486 233994;233995 233995 2 MISLTDTQK Acetyl (Protein N-term) 1077.5376 0.53761086 5164 Q9Y3E0 GOLT1B Vesicle transport protein GOT1B yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 73.75 73.655 2 0.0029069 84973 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 67.993 54.069 28131000 0 0 0 6015700 4804100 4907900 0 5200200 0 0 0 7203700 0 0 0 35332 5164 31902 295487;295488;295489;295490;295491;295492;295493;295494 233996;233997;233998;233999;234000;234001;234002 233996 7 MISLTDTQK Acetyl (Protein N-term);Oxidation (M) 1093.5325 0.53252548 5164 Q9Y3E0 GOLT1B Vesicle transport protein GOT1B yes yes 1 1 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 54.261 54.547 2 0.001601 62051 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 61.679 42.873 16421000 0 0 0 0 0 0 0 3174600 2697700 4934000 0 5614900 0 0 0 35333 5164 31902 295495;295496;295497;295498 234003;234004;234005 234004 6538 3 MITIDGK Oxidation (M) 792.40514 0.40514012 1828 P61019 RAB2A Ras-related protein Rab-2A yes yes 0 1 0 By MS/MS 2 0 1 1 57.275 51.453 2 0.04602 66416 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.98 55.273 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35334 1828 31903 295499 234006 234006 1 MITSAAGIISLLDEDEPQLK Oxidation (M) 2159.1032 0.10315103 4011 Q99460 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 1 0 By MS/MS By MS/MS 2.17 0.373 5 1 2 4 98.594 92.965 2;3 2.3412E-218 116346 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 244.71 224.97 240730000 44703000 196020000 0 0 0 0 0 0 0 0 0 0 0 0 0 35335 4011 31904 295500;295501;295502;295503;295504;295505 234007;234008;234009;234010;234011 234008 5502 5 MITSAAGIISLLDEDEPQLK Unmodified 2143.1082 0.10823641 4011 Q99460 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.29 0.452 5 2 2 4 1 99.331 94.357 2;3 2.3056E-107 117923 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 185.95 158.54 321240000 78546000 240560000 2137900 0 0 0 0 0 0 0 0 0 0 0 0 35336 4011 31904 295506;295507;295508;295509;295510;295511;295512 234012;234013;234014;234015;234016;234017 234016 6 MITSAAGIISLLDEDEPQLK Acetyl (Protein N-term);Oxidation (M) 2201.1137 0.11371571 4011 Q99460 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 1 1 0 By MS/MS 2.5 0.5 1 1 2 101.28 97.185 2 1.1677E-103 119755 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 176.91 138.13 28260000 0 28260000 0 0 0 0 0 0 0 0 0 0 0 0 0 35337 4011 31904 295513;295514 234018;234019;234020;234021;234022 234019 5502 5 MITSAAGIISLLDEDEPQLK Acetyl (Protein N-term) 2185.1188 0.11880109 4011 Q99460 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 103.88 98.383 2 1.7353E-23 122876 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 142.38 128.98 42038000 4987800 37050000 0 0 0 0 0 0 0 0 0 0 0 0 0 35338 4011 31904 295515;295516;295517;295518 234023;234024;234025;234026 234023 4 MITSELPVLQDSTNETTAHSDAGSELEETEVK Acetyl (Protein N-term) 3502.6145 0.61448337 3563 Q8WVM7 STAG1 Cohesin subunit SA-1 yes yes 1 0 0 By MS/MS 2 0 1 1 94.564 89.668 3 5.3599E-92 111248 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.81 127.76 28273000 0 28273000 0 0 0 0 0 0 0 0 0 0 0 0 0 35339 3563 31905 295519 234027 234027 1 MITSLSK Oxidation (M) 794.42079 0.42079019 1590 P49736 MCM2 DNA replication licensing factor MCM2 yes yes 0 1 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 22.479 18.23 2 0.025874 26616 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.262 32.265 402430000 121220000 281220000 0 0 0 0 0 0 0 0 0 0 0 0 0 35340 1590 31906 295520;295521;295522 234028;234029;234030;234031;234032;234033 234033 6 MITSLSK Unmodified 778.42588 0.42587556 1590 P49736 MCM2 DNA replication licensing factor MCM2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 2 2 33.848 29.439 2 0.035514 38943 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.244 22.246 1956600000 687390000 1249500000 19747000 0 0 0 0 0 0 0 0 0 0 0 0 35341 1590 31906 295523;295524;295525;295526;295527 234034;234035;234036 234034 3 MITTSGPTSEK Unmodified 1150.554 0.5539892 318 O43318 MAP3K7 Mitogen-activated protein kinase kinase kinase 7 yes yes 0 0 0 By matching By MS/MS By matching By matching 10 0 4 1 1 1 1 22.681 22.837 2 0.013528 23772 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 46.462 19.86 10715000 0 0 0 0 0 2910800 0 0 2169200 2056400 0 0 0 3578400 0 35342 318 31907 295528;295529;295530;295531 234037 234037 1 MIVDPVEPHGEMK 2 Oxidation (M) 1512.6953 0.69525049 2262 Q13263 TRIM28 Transcription intermediary factor 1-beta yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.89 3.41 3 2 13 1 2 2 1 2 1 1 1 2 1 1 2 1 37.356 36.268 2;3 0.00073565 39952 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 59.426 50.237 483120000 2430100 113540000 171560000 0 4806600 54635000 3455800 3845500 2114100 56974000 4400000 6533500 0 52578000 6246500 35343 2262 31908 295532;295533;295534;295535;295536;295537;295538;295539;295540;295541;295542;295543;295544;295545;295546;295547;295548;295549 234038;234039;234040;234041;234042;234043;234044;234045;234046;234047 234040 3688;3689 8 MIVDPVEPHGEMK Oxidation (M) 1496.7003 0.70033587 2262 Q13263 TRIM28 Transcription intermediary factor 1-beta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.32 3.22 5 1 22 2 2 2 2 2 2 2 2 2 2 1 2 2 1 2 46.217 45.012 2;3 3.6496E-08 49585 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 97.86 92.161 1764800000 71063000 731800000 162310000 66049000 46277000 37360000 61539000 32952000 57608000 65937000 55412000 118560000 107360000 53145000 97385000 35344 2262 31908 295550;295551;295552;295553;295554;295555;295556;295557;295558;295559;295560;295561;295562;295563;295564;295565;295566;295567;295568;295569;295570;295571;295572;295573;295574;295575;295576;295577 234048;234049;234050;234051;234052;234053;234054;234055;234056;234057;234058;234059;234060;234061;234062;234063;234064;234065;234066;234067;234068;234069;234070;234071;234072;234073;234074;234075;234076;234077;234078;234079;234080;234081;234082;234083;234084;234085;234086;234087;234088 234082 3688;3689 40 MIVDPVEPHGEMK Unmodified 1480.7054 0.70542124 2262 Q13263 TRIM28 Transcription intermediary factor 1-beta yes yes 0 0 0 By matching By MS/MS By MS/MS 2.14 0.35 6 1 1 5 1 60.141 54.373 2;3 4.6546E-13 70653 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.49 140.49 1293200000 13551000 1130500000 149170000 0 0 0 0 0 0 0 0 0 0 0 0 35345 2262 31908 295578;295579;295580;295581;295582;295583;295584 234089;234090;234091;234092;234093;234094;234095;234096;234097;234098 234096 9 MIVQENK Oxidation (M) 876.4375 0.43750288 2904 Q6NXE6 ARMC6 Armadillo repeat-containing protein 6 yes yes 0 1 0 By MS/MS 2 0 1 1 9.3073 6.0525 2 0.024739 8610 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.048 29.91 93770000 0 93770000 0 0 0 0 0 0 0 0 0 0 0 0 0 35346 2904 31909 295585 234099 234099 1 MIVSDIMQQAQYDQPLEK Unmodified 2136.0231 0.023126568 342 O43572 AKAP10 A-kinase anchor protein 10, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 88.188 83.346 3 3.0452E-10 103627 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 61.52 52.903 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35347 342 31910 295586 234100 234100 1 MIVTDIYNHR Unmodified 1260.6285 0.62849155 5198 Q9Y4E8 USP15 Ubiquitin carboxyl-terminal hydrolase 15 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 56.011 56.265 3 0.023273 63142 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.117 33.637 29715000 0 0 0 0 0 3866100 0 2268100 1689300 4332200 4235400 0 0 3135700 10188000 35348 5198 31911 295587;295588;295589;295590;295591;295592;295593 234101 234101 1 MIVTDIYNHR Oxidation (M) 1276.6234 0.62340617 5198 Q9Y4E8 USP15 Ubiquitin carboxyl-terminal hydrolase 15 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 45.207 45.548 2 0.010252 51006 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 50.04 24.102 78491000 0 0 0 0 0 0 4425500 5128700 8245100 10755000 11547000 10979000 10936000 5624300 10850000 35349 5198 31911 295594;295595;295596;295597;295598;295599;295600;295601;295602 234102;234103 234102 6592 2 MIVVESLLK Unmodified 1030.6097 0.60965359 2097 Q03468 ERCC6 DNA excision repair protein ERCC-6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 83.452 82.474 2 0.016715 105309 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.713 59.014 51018000 24668000 0 2552000 0 1877100 3123200 0 2472100 2211800 4139400 3441400 4101300 0 0 2431800 35350 2097 31912 295603;295604;295605;295606;295607;295608;295609;295610;295611;295612 234104;234105;234106;234107 234106 4 MIVVESLLK Oxidation (M) 1046.6046 0.60456821 2097 Q03468 ERCC6 DNA excision repair protein ERCC-6 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By matching 7.42 3.66 3 1 8 1 2 1 1 1 1 1 1 1 1 1 78.191 76.724 2 0.009765 98048 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.212 69.058 90559000 12686000 14165000 5828600 0 0 5814800 6276600 0 4726200 10266000 7348700 0 7362200 6672900 9411000 35351 2097 31912 295613;295614;295615;295616;295617;295618;295619;295620;295621;295622;295623;295624 234108;234109;234110;234111 234110 3395 3 MIVVLGEIGGTEEYK Oxidation (M) 1652.8331 0.83312418 1714 P53396 ACLY ATP-citrate synthase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.57 3.46 3 2 2 3 1 1 1 1 80.966 78.473 2 1.1131E-39 99118 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 140.78 131.45 116080000 72222000 3351700 5933900 0 0 13442000 0 0 0 0 21132000 0 0 0 0 35352 1714 31913 295625;295626;295627;295628;295629;295630;295631 234112;234113;234114;234115;234116;234117;234118;234119 234117 2780 8 MIVVLGEIGGTEEYK Unmodified 1636.8382 0.83820956 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.43 3.54 4 1 2 3 1 1 1 1 86.393 82.568 2;3 0.00010431 106253 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.813 89.589 148800000 102040000 34835000 1707100 0 0 0 0 5968500 4247400 0 0 0 0 0 0 35353 1714 31913 295632;295633;295634;295635;295636;295637;295638 234120;234121;234122;234123;234124;234125;234126;234127;234128;234129;234130 234128 11 MIYASSK Unmodified 798.39458 0.39457544 1165;1822;5088 P23528;P60981;Q9Y281 CFL1;DSTN;CFL2 Cofilin-1;Destrin;Cofilin-2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.87 3.56 1 2 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 23.507 23.352 2 0.02218 15782 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 105.39 80.392 9640900000 79871000 8573300000 139750000 35377000 0 41776000 37868000 26429000 26657000 41857000 165030000 76757000 44544000 131680000 219960000 35354 1165;1822;5088 31914 295639;295640;295641;295642;295643;295644;295645;295646;295647;295648;295649;295650;295651;295652;295653 234131;234132;234133;234134;234135;234136;234137;234138;234139;234140;234141;234142;234143;234144 234141 14 MIYASSK Oxidation (M) 814.38949 0.38949006 1165;1822;5088 P23528;P60981;Q9Y281 CFL1;DSTN;CFL2 Cofilin-1;Destrin;Cofilin-2 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 4.9 3.78 2 7 4 7 6 5 2 1 1 1 1 1 1 1 20.104 18.847 1;2 0.013646 9983 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.359 84.359 6578400000 682670000 5714700000 52498000 0 4456800 0 0 4075700 5154100 0 45694000 0 8968500 19009000 41169000 35355 1165;1822;5088 31914 295654;295655;295656;295657;295658;295659;295660;295661;295662;295663;295664;295665;295666;295667;295668;295669;295670;295671;295672;295673 234145;234146;234147;234148;234149;234150;234151;234152;234153;234154;234155;234156;234157;234158;234159 234149 1686 14 MIYSSSNLK Unmodified 1041.5165 0.51648149 4822 Q9P2N5 RBM27 RNA-binding protein 27 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 36.673 36.913 2 0.03116 40873 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 47.869 28.43 70881000 0 0 0 4120900 0 5299700 5032300 5332500 4281500 7602900 5011700 8108200 8707100 8848100 8536300 35356 4822 31915 295674;295675;295676;295677;295678;295679;295680;295681;295682;295683;295684 234160;234161 234161 2 MKLDYILGLK Oxidation (M) 1208.6839 0.68388117 1511 P46781 RPS9 40S ribosomal protein S9 yes yes 0 1 1 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 73.604 73.777 2 0.026273 84274 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.044 80.804 50741000 0 0 0 0 0 2273200 0 0 2355900 3290600 5971500 10466000 6938000 4710500 14736000 35357 1511 31916 295685;295686;295687;295688;295689;295690;295691;295692 234162;234163 234162 2 MKPDETPMFDPSLLK 2 Oxidation (M) 1779.8423 0.84230866 3814 Q96EK6 GNPNAT1 Glucosamine 6-phosphate N-acetyltransferase yes yes 0 2 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.23 2.28 2 2 35 3 1 3 3 3 3 3 3 4 3 4 1 2 3 72.297 71.987 2;3 0.00023367 82222 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 80.245 66.339 1218100000 0 159440000 14281000 57130000 99839000 101420000 28285000 29033000 26368000 190560000 118410000 359890000 3699200 6292500 23409000 35358 3814 31917 295693;295694;295695;295696;295697;295698;295699;295700;295701;295702;295703;295704;295705;295706;295707;295708;295709;295710;295711;295712;295713;295714;295715;295716;295717;295718;295719;295720;295721;295722;295723;295724;295725;295726;295727;295728;295729;295730;295731 234164;234165;234166;234167;234168;234169;234170;234171;234172;234173;234174;234175;234176;234177;234178;234179;234180 234175 5340;5341 11 MKPDETPMFDPSLLK Oxidation (M) 1763.8474 0.84739403 3814 Q96EK6 GNPNAT1 Glucosamine 6-phosphate N-acetyltransferase yes yes 0 1 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 9.3 2.21 2 1 30 2 1 2 3 3 3 2 2 4 3 4 3 1 76.827 76.556 2;3 4.838E-22 90164 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 122.46 111.8 687240000 0 136810000 11831000 15922000 25436000 70513000 12907000 23300000 16335000 103390000 69544000 186810000 0 7509400 6922300 35359 3814 31917 295732;295733;295734;295735;295736;295737;295738;295739;295740;295741;295742;295743;295744;295745;295746;295747;295748;295749;295750;295751;295752;295753;295754;295755;295756;295757;295758;295759;295760;295761;295762;295763;295764 234181;234182;234183;234184;234185;234186;234187;234188;234189;234190;234191;234192 234191 5340;5341 10 MKPDETPMFDPSLLK Unmodified 1747.8525 0.85247941 3814 Q96EK6 GNPNAT1 Glucosamine 6-phosphate N-acetyltransferase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.15 3.37 3 10 2 1 1 1 1 1 1 1 1 1 1 1 81.422 80.537 2;3 0.00093201 92808 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 38.376 34.472 435120000 0 232650000 14758000 3697000 8141000 25549000 1631800 10932000 4848700 27975000 40457000 49536000 0 0 14938000 35360 3814 31917 295765;295766;295767;295768;295769;295770;295771;295772;295773;295774;295775;295776;295777 234193;234194;234195;234196;234197;234198;234199;234200;234201;234202 234202 9 MKPDETPMFDPSLLK Acetyl (Protein N-term);Oxidation (M) 1805.858 0.85795872 3814 Q96EK6 GNPNAT1 Glucosamine 6-phosphate N-acetyltransferase yes yes 1 1 1 By MS/MS 2 0 1 1 88.509 83.667 2 5.2811E-08 104023 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.17 92.512 29568000 0 29568000 0 0 0 0 0 0 0 0 0 0 0 0 0 35361 3814 31917 295778 234203 234203 5340;5341 1 MKPDETPMFDPSLLK Acetyl (Protein N-term) 1789.863 0.8630441 3814 Q96EK6 GNPNAT1 Glucosamine 6-phosphate N-acetyltransferase yes yes 1 0 1 By MS/MS 2 0 1 1 93.208 88.297 2 0.013196 109599 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 43.337 22.911 33584000 0 33584000 0 0 0 0 0 0 0 0 0 0 0 0 0 35362 3814 31917 295779 234204 234204 1 MKPILLQGHER Unmodified 1320.7336 0.73362533 2273 Q13347 EIF3I Eukaryotic translation initiation factor 3 subunit I yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 37.138 37.421 3 0.0093661 39538 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.069 41.083 105140000 0 0 0 4583900 0 0 6655800 8527700 0 0 9570600 19011000 0 13711000 43080000 35363 2273 31918 295780;295781;295782;295783;295784;295785;295786 234205;234206;234207;234208;234209;234210 234206 6 MKPILLQGHER Oxidation (M) 1336.7285 0.72853995 2273 Q13347 EIF3I Eukaryotic translation initiation factor 3 subunit I yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 26.048 26.49 3 0.0077011 28586 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 56.087 36.347 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35364 2273 31918 295787;295788;295789 234211;234212;234213 234212 3705 3 MKYDESDNAFIR Unmodified 1487.6715 0.67147858 346 O43615 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 0 0 1 By MS/MS By MS/MS By matching 10 0 3 1 1 1 49.191 49.5 3 0.033975 55260 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 32.567 12.288 43364000 0 0 0 0 10619000 0 0 0 0 0 0 11192000 0 0 21553000 35365 346 31919 295790;295791;295792 234214 234214 1 MKYDESDNAFIR Oxidation (M) 1503.6664 0.6663932 346 O43615 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 41.649 41.784 3 0.026964 46090 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 40.475 35.16 42708000 0 0 0 3070400 3133800 0 4762400 6356100 0 3710500 5997000 6923500 4833200 3920600 0 35366 346 31919 295793;295794;295795;295796;295797;295798;295799;295800;295801 234215 234215 0 MLAAQGVDPGLAR Unmodified 1297.6813 0.6812554 1097 P19971 TYMP Thymidine phosphorylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 58.696 58.866 2 1.2499E-08 66174 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.14 77.295 56619000 0 0 0 23318000 0 4367000 2136200 0 0 3593100 4878500 3272900 1663700 2593900 10795000 35367 1097 31920 295802;295803;295804;295805;295806;295807;295808;295809;295810 234216;234217;234218;234219;234220;234221;234222;234223 234218 7 MLAAYLYEVSQLKD Oxidation (M) 1658.8226 0.82255949 3910 Q96KP4 CNDP2 Cytosolic non-specific dipeptidase yes yes 0 1 1 By MS/MS 2 0 1 1 91.816 83.685 2 1.4939E-05 108515 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.79 77.314 10780000 10780000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35368 3910 31921 295811 234224 234224 5409 1 MLADDAEAGAEDEK Oxidation (M) 1479.6035 0.60351817 5059 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.612 26.813 2 9.0909E-14 28408 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 111.63 89.944 79155000 0 0 0 5711800 5237100 6115300 6277500 2588100 4247000 8484200 7757900 12466000 7982700 4770500 7517400 35369 5059 31922 295812;295813;295814;295815;295816;295817;295818;295819;295820;295821;295822;295823 234225;234226;234227;234228;234229;234230;234231;234232;234233;234234;234235;234236 234234 6412 12 MLADDAEAGAEDEK Unmodified 1463.6086 0.60860355 5059 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.391 33.576 2 0.0004006 36959 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 85.288 76.33 72394000 0 0 0 5237600 3890500 3751500 2292900 3917900 2325500 5815700 7879800 12287000 6380300 8039900 10576000 35370 5059 31922 295824;295825;295826;295827;295828;295829;295830;295831;295832;295833;295834;295835 234237;234238;234239;234240;234241;234242;234243;234244;234245;234246;234247;234248 234237 12 MLAEDELR Unmodified 975.46953 0.46953129 2011 P84077;P61204 ARF1;ARF3 ADP-ribosylation factor 1;ADP-ribosylation factor 3 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.047 43.222 2 0.019504 47771 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 63.565 24.773 166260000 0 0 0 13251000 6062600 8849400 10294000 9263900 7164800 16177000 19917000 21326000 13040000 12371000 28541000 35371 2011 31923 295836;295837;295838;295839;295840;295841;295842;295843;295844;295845;295846;295847 234249;234250;234251;234252;234253 234253 5 MLAEDELR Oxidation (M) 991.46445 0.46444592 2011 P84077;P61204 ARF1;ARF3 ADP-ribosylation factor 1;ADP-ribosylation factor 3 yes no 0 1 0 By MS/MS 10 0 1 1 33.105 32.718 2 0.035185 36218 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 74.127 26.384 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35372 2011 31923 295848 234254 234254 1 MLAHTPQQK Oxidation (M) 1068.5386 0.53861391 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 1 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 7.0802 7.2239 2 0.0033882 4203 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 82.279 54.172 17532000 0 0 0 881460 0 0 2304200 1459700 0 2630200 0 1378500 2676600 3859800 2341700 35373 19 31924 295849;295850;295851;295852;295853;295854;295855;295856 234255;234256;234257;234258 234257 18 4 MLAHTPQQK Unmodified 1052.5437 0.54369929 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 11.502 11.587 2 0.0099506 10504 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 65.252 42.233 11981000 0 0 0 655340 782690 1002600 866430 1616600 0 1400200 0 1887400 1832300 1937200 0 35374 19 31924 295857;295858;295859;295860;295861;295862;295863;295864;295865 234259;234260;234261;234262 234259 3 MLAIYDGFDGFAK Oxidation (M) 1462.6803 0.68025235 2064 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 84.335 84.4 2 1.5922E-11 97755 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 118.4 96.317 362960000 0 0 0 8434300 25977000 30062000 22349000 34338000 26355000 37110000 45590000 40579000 20936000 26146000 45081000 35375 2064 31925 295866;295867;295868;295869;295870;295871;295872;295873;295874;295875;295876;295877 234263;234264;234265;234266;234267;234268;234269;234270;234271;234272;234273;234274;234275;234276 234268 3354 14 MLAIYDGFDGFAK Unmodified 1446.6853 0.68533773 2064 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 87.66 87.8 2 2.847E-08 101576 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.24 103.09 45557000 0 0 0 0 0 3288600 1642300 3783900 2752600 5534400 3877000 4017500 1897000 3598200 15166000 35376 2064 31925 295878;295879;295880;295881;295882;295883;295884;295885;295886;295887 234277;234278;234279;234280;234281;234282;234283;234284;234285;234286;234287;234288 234281 12 MLALALLDR Oxidation (M) 1030.5845 0.58450147 3643 Q92621 NUP205 Nuclear pore complex protein Nup205 yes yes 0 1 0 By MS/MS 10 0 1 1 81.093 81.106 2 0.029264 93853 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 63.48 36.878 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35377 3643 31926 295888 234289 234289 1 MLALSCK Unmodified 821.41393 0.41393067 535 O75717 WDHD1 WD repeat and HMG-box DNA-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 44.013 38.007 2 0.045032 49300 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.616 29.855 98401000 63283000 35117000 0 0 0 0 0 0 0 0 0 0 0 0 0 35378 535 31927 295889;295890 234290 234290 1 MLANFESGK Oxidation (M) 1011.4695 0.46953129 4168 Q9BUQ8 DDX23 Probable ATP-dependent RNA helicase DDX23 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 31.113 31.307 2 0.0034271 33721 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 80.438 61.656 64707000 0 0 0 4773800 4377600 5895000 7105600 3958300 0 5735900 7489500 10012000 4673900 4991300 5694100 35379 4168 31928 295891;295892;295893;295894;295895;295896;295897;295898;295899;295900;295901 234291;234292;234293;234294;234295;234296;234297;234298;234299;234300;234301;234302;234303 234300 5664 13 MLANFESGK Unmodified 995.47462 0.47461667 4168 Q9BUQ8 DDX23 Probable ATP-dependent RNA helicase DDX23 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42.832 42.035 2 0.0055928 47181 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 77.318 59.953 214260000 4985000 71829000 0 6823200 6839400 10029000 10634000 10761000 5592200 14917000 14842000 12874000 13208000 12435000 18486000 35380 4168 31928 295902;295903;295904;295905;295906;295907;295908;295909;295910;295911;295912;295913;295914;295915 234304;234305;234306;234307;234308;234309;234310;234311;234312;234313;234314;234315 234309 12 MLAPEGALNIHEK Unmodified 1421.7337 0.7336849 2031 Q00169 PITPNA Phosphatidylinositol transfer protein alpha isoform yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 58.505 58.768 3 0.0083729 65996 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 28.532 20.808 63925000 0 0 0 0 0 6198300 3796300 4202600 2435400 6900400 7859800 5756300 4032800 0 22743000 35381 2031 31929 295916;295917;295918;295919;295920;295921;295922;295923;295924 234316 234316 1 MLAQPLK Oxidation (M) 815.45751 0.45751004 1335 P34896 SHMT1 Serine hydroxymethyltransferase, cytosolic yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 2 1 1 1 1 30.345 26.17 2 0.019369 34266 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.55 59.31 152100000 1224200 133310000 17565000 0 0 0 0 0 0 0 0 0 0 0 0 35382 1335 31930 295925;295926;295927 234317;234318 234317 2012 2 MLAQPLK Unmodified 799.4626 0.46259542 1335 P34896 SHMT1 Serine hydroxymethyltransferase, cytosolic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 6 4 3 3 1 1 1 1 1 1 38.295 35.985 2 0.025274 39458 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 81.1 44.513 587250000 271120000 271300000 10009000 0 0 0 0 0 0 0 8322000 0 3706100 0 22798000 35383 1335 31930 295928;295929;295930;295931;295932;295933 234319;234320;234321;234322;234323 234323 5 MLASASEDHFIDIAEVETGDK Oxidation (M) 2293.042 0.042007334 3887 Q96J01 THOC3 THO complex subunit 3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 5.57 3.85 3 1 3 1 2 1 1 1 1 81.329 78.744 3 4.0485E-83 99678 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 150.98 141.17 104480000 35288000 31080000 12703000 0 0 0 0 0 3017800 7169100 0 0 0 0 15225000 35384 3887 31931 295934;295935;295936;295937;295938;295939;295940 234324;234325;234326;234327;234328;234329;234330 234328 5389 7 MLASASEDHFIDIAEVETGDK Unmodified 2277.0471 0.047092712 3887 Q96J01 THOC3 THO complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 85.321 80.035 3 0.00045371 102599 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.858 45.857 48834000 45040000 0 3793300 0 0 0 0 0 0 0 0 0 0 0 0 35385 3887 31931 295941;295942 234331;234332 234331 2 MLATDGAAQQAHTTR Unmodified 1570.7522 0.75218852 4474 Q9H9L4 KANSL2 KAT8 regulatory NSL complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 23.481 23.769 3 0.0014037 24851 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 52.599 39.462 48543000 0 0 0 0 0 0 3992700 5782000 3025900 6110200 5954300 0 6348800 6120000 11210000 35386 4474 31932 295943;295944;295945;295946;295947;295948;295949;295950 234333;234334;234335;234336;234337 234333 5 MLATDGAAQQAHTTR Oxidation (M) 1586.7471 0.74710314 4474 Q9H9L4 KANSL2 KAT8 regulatory NSL complex subunit 2 yes yes 0 1 0 By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 17.568 17.709 3 0.0008468 17481 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 45.614 35.814 28002000 0 0 0 0 0 3182500 4479900 4127700 2492600 4164400 0 0 3575600 5979100 0 35387 4474 31932 295951;295952;295953;295954;295955;295956;295957;295958 234338;234339 234338 5911 2 MLATLEPEQR Oxidation (M) 1202.5965 0.59652272 1749 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 0 1 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 40.548 40.636 2 0.0010452 45390 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 93.551 64.389 8946200 0 0 0 0 0 2763200 4063800 0 0 2119100 0 0 0 0 0 35388 1749 31933 295959;295960;295961 234340;234341 234341 2844 2 MLATLFK Unmodified 822.46735 0.46734645 4137 Q9BT78 COPS4 COP9 signalosome complex subunit 4 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 70.466 70.604 2 0.02342 80092 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.086 23.372 58408000 0 0 0 0 2008500 4411400 2402300 3647600 2656700 4028300 6457200 6266800 4256700 6171700 16101000 35389 4137 31934 295962;295963;295964;295965;295966;295967;295968;295969;295970;295971;295972 234342;234343 234343 2 MLATTDTNK Unmodified 993.4801 0.48009598 3657 Q92766 RREB1 Ras-responsive element-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 15.113 15.012 2 0.010678 14520 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 63.961 41.069 168800000 0 44202000 0 11041000 6102600 7863200 9214400 8421000 7224300 11336000 14370000 13065000 13844000 11154000 10965000 35390 3657 31935 295973;295974;295975;295976;295977;295978;295979;295980;295981;295982;295983;295984;295985 234344;234345;234346;234347;234348;234349;234350;234351 234344 5 MLATTDTNK Oxidation (M) 1009.475 0.4750106 3657 Q92766 RREB1 Ras-responsive element-binding protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 8.0303 8.2134 2 0.0080738 5216 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 61.582 36.132 21129000 0 0 0 0 0 1757000 0 2026600 1841400 2256900 4485100 3682900 2885500 2193600 0 35391 3657 31935 295986;295987;295988;295989;295990;295991;295992;295993 234352;234353;234354;234355 234353 5176 4 MLCSNAEGASLK Unmodified 1279.5901 0.59005713 3045 Q7L273 KCTD9 BTB/POZ domain-containing protein KCTD9 yes yes 0 0 0 By MS/MS 2 0 1 1 40.402 35.35 2 0.022436 46126 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.944 33.915 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35392 3045 31936 295994 234356 234356 1 MLDAAVIK Unmodified 859.48372 0.48372479 4230 Q9BXP5 SRRT Serrate RNA effector molecule homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 51.923 52.109 2 0.040979 58850 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 50.127 8.6244 95022000 0 0 0 0 0 22786000 0 0 0 0 0 0 32085000 40152000 0 35393 4230 31937 295995;295996;295997 234357;234358;234359 234357 3 MLDAAVIK Oxidation (M) 875.47864 0.47863942 4230 Q9BXP5 SRRT Serrate RNA effector molecule homolog yes yes 0 1 0 By MS/MS 3 0 1 1 46.194 41.336 2 0.04032 51387 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 67.981 14.427 9328400 0 9328400 0 0 0 0 0 0 0 0 0 0 0 0 0 35394 4230 31937 295998 234360 234360 1 MLDAEDIVGTARPDEK Unmodified 1758.8458 0.84581413 971 P12814 ACTN1 Alpha-actinin-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.35 3.6 3 3 11 2 3 1 1 1 1 1 1 1 1 1 1 1 1 70.59 69.029 2;3 1.7899E-45 89327 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 155.57 129.59 1674100000 157970000 1334900000 20111000 0 3830200 10946000 4722000 6143600 4557300 10276000 14407000 20341000 5535400 20706000 59650000 35395 971 31938 295999;296000;296001;296002;296003;296004;296005;296006;296007;296008;296009;296010;296011;296012;296013;296014;296015 234361;234362;234363;234364;234365;234366;234367;234368;234369;234370;234371;234372;234373;234374 234367 14 MLDAEDIVGTARPDEK Oxidation (M) 1774.8407 0.84072875 971 P12814 ACTN1 Alpha-actinin-1 yes yes 0 1 1 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.55 2 2 8 3 1 1 1 1 1 1 1 1 1 62.794 61.684 2;3 1.6937E-23 75863 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 122.63 115.22 303340000 0 173040000 21246000 5909600 0 0 9152100 8510800 5528800 12868000 24355000 21886000 0 20842000 0 35396 971 31938 296016;296017;296018;296019;296020;296021;296022;296023;296024;296025;296026;296027 234375;234376;234377;234378;234379;234380;234381;234382;234383;234384 234379 1285 6 MLDAEDIVNTARPDEK Oxidation (M) 1831.8622 0.86219247 356 O43707 ACTN4 Alpha-actinin-4 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.12 3.9 10 3 13 4 6 3 2 1 1 1 1 1 2 1 1 1 1 66.873 64.453 2;3 2.6676E-92 84522 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 221.09 196.24 2991800000 270290000 2075400000 94572000 24050000 16330000 62068000 27561000 16248000 23248000 49994000 65997000 82973000 27374000 0 155670000 35397 356 31939 296028;296029;296030;296031;296032;296033;296034;296035;296036;296037;296038;296039;296040;296041;296042;296043;296044;296045;296046;296047;296048;296049;296050;296051;296052;296053 234385;234386;234387;234388;234389;234390;234391;234392;234393;234394;234395;234396;234397;234398;234399;234400;234401;234402;234403;234404;234405;234406;234407;234408;234409;234410;234411 234401 452 25 MLDAEDIVNTARPDEK Unmodified 1815.8673 0.86727785 356 O43707 ACTN4 Alpha-actinin-4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.75 3.51 5 2 17 2 5 1 1 2 1 1 2 2 2 1 2 2 72.472 70.956 2;3 0 89536 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 298.82 264.05 5591200000 583070000 4479400000 0 13486000 12249000 43409000 0 12072000 12773000 24354000 56587000 64692000 14938000 46271000 227890000 35398 356 31939 296054;296055;296056;296057;296058;296059;296060;296061;296062;296063;296064;296065;296066;296067;296068;296069;296070;296071;296072;296073;296074;296075;296076;296077 234412;234413;234414;234415;234416;234417;234418;234419;234420;234421;234422;234423;234424;234425;234426;234427;234428;234429;234430;234431;234432 234415 19 MLDEAVFQVFK Oxidation (M) 1341.6639 0.663874 3432 Q8NEY1 NAV1 Neuron navigator 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 86.431 86.531 2 6.3391E-05 100053 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.87 72.568 35331000 0 0 0 0 2004700 3075500 3722300 0 2663400 3996700 4663100 3801100 0 3146700 8256900 35399 3432 31940 296078;296079;296080;296081;296082;296083;296084;296085;296086 234433;234434;234435;234436;234437;234438;234439;234440;234441 234436 4975 8 MLDGTVK Oxidation (M) 778.38949 0.38949006 5187 Q9Y490 TLN1 Talin-1 yes yes 0 1 0 By matching By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 11.816 11.943 2 0.045272 11030 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 50.966 26.334 61903000 0 0 0 0 4848800 8785000 6181300 6946500 4856500 9169000 0 14329000 0 0 6787900 35400 5187 31941 296087;296088;296089;296090;296091;296092;296093;296094 234442;234443 234442 2 MLDHEYTTK Unmodified 1136.5172 0.51720977 945 P11387;Q969P6 TOP1;TOP1MT DNA topoisomerase 1;DNA topoisomerase I, mitochondrial yes no 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 22.214 19.348 2 0.018368 24683 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 77.732 38.94 8035400 0 0 8035400 0 0 0 0 0 0 0 0 0 0 0 0 35401 945 31942 296095;296096 234444;234445 234445 2 MLDLEVVPER Oxidation (M) 1215.6169 0.61692381 4132 Q9BSU1 C16orf70 UPF0183 protein C16orf70 yes yes 0 1 0 By MS/MS 10 0 1 1 71.134 71.402 2 0.030289 82169 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 54.982 33.534 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35402 4132 31943 296097 234446 234446 1 MLDLLEDFLDYEGYK Unmodified 1862.8648 0.86481824 2201 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes yes 0 0 0 By MS/MS 2 0 1 1 102.33 94.202 2 8.5825E-07 121240 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 105.03 79.02 16391000 16391000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35403 2201 31944 296098 234447 234447 1 MLDLLEDFLEHEGYK Unmodified 1850.8761 0.87605162 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 100.05 94.209 3 2.1348E-05 119182 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.582 77.032 54824000 54824000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35404 2451 31945 296099;296100 234448;234449 234449 2 MLDLLEDFLEHEGYK Oxidation (M) 1866.871 0.87096625 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 1 0 By MS/MS 2 0 1 1 99.029 90.898 3 1.9325E-40 117235 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 142.97 114 69918000 69918000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35405 2451 31945 296101 234450 234450 4024 1 MLDMGFEPQIR 2 Oxidation (M) 1367.6214 0.62135726 170;1062;3670 O00571;O15523;P17844;Q92841 DDX3X;DDX3Y;DDX5;DDX17 ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y;Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 no no 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 61.463 61.718 2 0.002445 70425 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 53.756 40.719 134670000 0 0 0 0 0 19179000 0 0 0 23739000 32747000 0 0 30195000 28811000 35406 170;1062;3670 31946 296102;296103;296104;296105;296106 234451 234451 240;241;1489;1490 1 MLDMGFEPQIR Oxidation (M) 1351.6264 0.62644264 170;1062;3670 O00571;O15523;P17844;Q92841 DDX3X;DDX3Y;DDX5;DDX17 ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y;Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 1 2 2 2 2 2 2 72.275 72.342 2 0.00017374 87455 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 91.867 56.571 240810000 0 0 0 12073000 12844000 21462000 17742000 16429000 4845500 25288000 22535000 27051000 22021000 22955000 35566000 35407 170;1062;3670 31946 296107;296108;296109;296110;296111;296112;296113;296114;296115;296116;296117;296118;296119;296120;296121;296122;296123;296124;296125;296126;296127;296128;296129 234452;234453;234454;234455;234456;234457;234458;234459;234460;234461;234462;234463;234464;234465;234466;234467;234468;234469;234470;234471;234472;234473;234474;234475;234476 234458 240;241;1489;1490 24 MLDMGFEPQIR Unmodified 1335.6315 0.63152802 170;1062;3670 O00571;O15523;P17844;Q92841 DDX3X;DDX3Y;DDX5;DDX17 ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y;Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.294 80.354 2 0.00072876 92800 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 89.247 68.346 100680000 0 0 0 1838300 2436800 7229800 2623000 7232400 2957900 11331000 6554000 11543000 4829700 10035000 32069000 35408 170;1062;3670 31946 296130;296131;296132;296133;296134;296135;296136;296137;296138;296139;296140;296141 234477;234478;234479;234480;234481;234482;234483;234484;234485;234486;234487;234488 234483 12 MLDMGFEPQIRK 2 Oxidation (M) 1495.7163 0.71632028 1062;3670 P17844;Q92841 DDX5;DDX17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 no no 0 2 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 48.78 49.092 3 0.0049949 55342 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 49.934 43.248 106810000 0 0 0 0 0 17890000 0 0 11200000 17331000 21943000 14712000 23735000 0 0 35409 1062;3670 31947 296142;296143;296144;296145;296146;296147 234489 234489 1489;1490 0 MLDMGFEPQIRK Unmodified 1463.7265 0.72649104 1062;3670 P17844;Q92841 DDX5;DDX17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 no no 0 0 1 By matching By matching By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 71.189 71.415 3 0.017312 81398 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.504 30.775 37906000 0 0 0 0 0 0 0 4315300 0 3154900 0 3284900 4510500 3072300 19568000 35410 1062;3670 31947 296148;296149;296150;296151;296152;296153 234490 234490 1 MLDNDSILVDAIRK Oxidation (M) 1617.8396 0.83960654 470 O75175 CNOT3 CCR4-NOT transcription complex subunit 3 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 75.077 75.228 3 0.00036653 86798 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 57.804 51.075 16923000 0 0 0 0 0 0 0 0 0 5513200 6502400 0 0 4907700 0 35411 470 31948 296154;296155;296156 234491 234491 593 1 MLDNFDCFGDK Oxidation (M) 1376.5377 0.53768721 2476 Q15021 NCAPD2 Condensin complex subunit 1 yes yes 0 1 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 65.921 61.085 2 0.017946 78011 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.699 54.087 58383000 0 57009000 1374300 0 0 0 0 0 0 0 0 0 0 0 0 35412 2476 31949 296157;296158;296159 234492;234493 234492 4084 2 MLEDPQER Unmodified 1016.4597 0.45969489 4168 Q9BUQ8 DDX23 Probable ATP-dependent RNA helicase DDX23 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 23.356 23.579 2 0.036499 23691 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.854 41.44 76868000 0 0 0 4128700 3474800 5239300 0 4887100 4570900 9129300 7586900 11759000 7683800 9091700 9316100 35413 4168 31950 296160;296161;296162;296163;296164;296165;296166;296167;296168;296169;296170 234494;234495;234496;234497 234495 4 MLEDSQR Unmodified 877.39637 0.39636635 2940 Q6P996;Q6P474 PDXDC1;PDXDC2P Pyridoxal-dependent decarboxylase domain-containing protein 1;Putative pyridoxal-dependent decarboxylase domain-containing protein 2 yes no 0 0 0 By MS/MS 10 0 1 1 10.621 10.987 2 0.032282 8999 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.039 39.3 9330000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9330000 35414 2940 31951 296171 234498 234498 1 MLEELECGAPGAR Acetyl (Protein N-term) 1473.6592 0.65919933 2234 Q13111 CHAF1A Chromatin assembly factor 1 subunit A yes yes 1 0 0 By MS/MS 10 0 1 1 86.853 87.011 2 0.00084594 100617 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.785 41.407 2836100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2836100 35415 2234 31952 296172 234499 234499 1 MLEELNK Unmodified 875.44225 0.44225391 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 33.626 33.797 2 0.023018 36998 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 103.29 33.854 164680000 0 0 0 11468000 13123000 10370000 12837000 14091000 9440000 17995000 16990000 27315000 0 15943000 15105000 35416 4139 31953 296173;296174;296175;296176;296177;296178;296179;296180;296181;296182;296183 234500;234501;234502;234503;234504;234505;234506 234502 7 MLEELNK Oxidation (M) 891.43717 0.43716853 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 1 0 By MS/MS 2 0 1 1 24.803 20.675 2 0.04171 27459 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.496 26.957 28020000 0 28020000 0 0 0 0 0 0 0 0 0 0 0 0 0 35417 4139 31953 296184 234507 234507 1 MLEENTNILK Oxidation (M) 1219.6118 0.61183843 4746 Q9NYL9 TMOD3 Tropomodulin-3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 2 48.351 47.475 2 0.00047039 54430 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 121.05 86.241 441790000 0 241160000 2113600 13421000 13927000 17698000 19980000 12767000 12344000 19848000 24533000 28518000 20815000 14672000 0 35418 4746 31954 296185;296186;296187;296188;296189;296190;296191;296192;296193;296194;296195;296196;296197;296198;296199 234508;234509;234510;234511;234512;234513;234514;234515;234516;234517;234518;234519;234520;234521 234521 6122 12 MLEENTNILK Unmodified 1203.6169 0.61692381 4746 Q9NYL9 TMOD3 Tropomodulin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56.714 55.621 2 0.0040347 71635 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.52 74.148 1023200000 9793700 708550000 3281300 16779000 21046000 24582000 20685000 22401000 12441000 24209000 30475000 50654000 18091000 18839000 41377000 35419 4746 31954 296200;296201;296202;296203;296204;296205;296206;296207;296208;296209;296210;296211;296212;296213;296214 234522;234523;234524;234525;234526;234527;234528;234529;234530;234531;234532;234533 234525 11 MLEGGEDPLYVAR Oxidation (M) 1464.6919 0.69187967 3983 Q96S55 WRNIP1 ATPase WRNIP1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 62.142 62.294 2 4.5019E-05 70298 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 87.258 44.175 54789000 0 0 0 2928200 0 5705600 6933200 3334500 0 6893700 5273700 7595900 5156300 4098700 6869500 35420 3983 31955 296215;296216;296217;296218;296219;296220;296221;296222;296223;296224 234534;234535;234536;234537;234538;234539;234540;234541;234542;234543 234539 5466 9 MLEGGEDPLYVAR Unmodified 1448.697 0.69696505 3983 Q96S55 WRNIP1 ATPase WRNIP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 69.663 69.72 2 0.0025562 80365 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 75.387 33.939 47719000 0 0 0 1453000 1897000 4085300 2952200 4727500 2569400 4902300 0 5951100 4045600 5787900 9347900 35421 3983 31955 296225;296226;296227;296228;296229;296230;296231;296232;296233;296234;296235 234544;234545;234546;234547;234548;234549;234550;234551 234544 8 MLEICLK Acetyl (Protein N-term) 947.48201 0.48201024 731 P00519 ABL1 Tyrosine-protein kinase ABL1 yes yes 1 0 0 By MS/MS 10 0 1 1 22.444 22.791 2 0.039459 23864 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 40.946 40.946 7833900 0 0 0 0 0 0 0 0 0 0 0 0 7833900 0 0 35422 731 31956 296236 234552 234552 1 MLEIDPQK Oxidation (M) 988.48993 0.48993238 1177 P24752 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 41.268 36.37 2 0.015702 47239 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.296 57.335 48350000 0 48350000 0 0 0 0 0 0 0 0 0 0 0 0 0 35423 1177 31957 296237;296238 234553 234553 1706 1 MLEIDPQK Unmodified 972.49502 0.49501776 1177 P24752 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 52.107 46.334 2 0.033574 60217 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.7 81.735 164050000 0 164050000 0 0 0 0 0 0 0 0 0 0 0 0 0 35424 1177 31957 296239 234554 234554 0 MLEILEGK Unmodified 931.50485 0.50485417 1974 P78344 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 68.695 68.722 2 0.0075386 78628 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 89.296 30.315 156480000 0 0 0 8797900 11450000 15854000 9487800 11998000 12606000 22111000 20466000 27691000 16019000 0 0 35425 1974 31958 296240;296241;296242;296243;296244;296245;296246;296247;296248;296249 234555;234556;234557;234558;234559;234560;234561;234562;234563;234564 234559 9 MLEILEQQK Oxidation (M) 1146.5955 0.59546009 936 P11172 UMPS Uridine 5'-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5'-phosphate decarboxylase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 53.908 52.93 2 0.0020362 59821 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 127.56 92.757 152000000 7869400 0 6081300 4289700 3409000 25018000 4575000 3874300 9349000 23053000 29676000 0 21462000 13343000 0 35426 936 31959 296250;296251;296252;296253;296254;296255;296256;296257;296258;296259;296260;296261 234565;234566;234567;234568;234569;234570;234571;234572;234573;234574;234575;234576;234577 234565 1219 13 MLEILEQQK Unmodified 1130.6005 0.60054547 936 P11172 UMPS Uridine 5'-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5'-phosphate decarboxylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67.401 65.879 2 3.4069E-20 75465 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 174.27 109.51 268180000 17098000 175670000 4409600 0 3941700 11572000 6654600 5562400 0 11496000 0 0 7941600 6471700 17362000 35427 936 31959 296262;296263;296264;296265;296266;296267;296268;296269;296270;296271;296272;296273;296274;296275 234578;234579;234580;234581;234582;234583;234584;234585;234586;234587;234588;234589;234590;234591 234578 12 MLEMAQANSAGISDAVSRLETNQK 2 Oxidation (M) 2595.2269 0.22686477 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 2 1 By matching By matching By MS/MS 10 0 3 1 1 1 72.136 72.325 3 1.8287E-06 83410 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 46.178 43.455 12377000 0 0 0 0 0 0 1828200 0 4400600 0 6148200 0 0 0 0 35428 2291 31960 296276;296277;296278 234592 234592 3750;3751 1 MLENTDNSSPSTEHSQGLEK Unmodified 2202.9699 0.96990502 3863 Q96H79 ZC3HAV1L Zinc finger CCCH-type antiviral protein 1-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 31 30.5 3 9.5232E-140 39174 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 212.76 205.32 199010000 0 104700000 0 4506100 3921800 12917000 5576000 5448600 3931400 9852600 7080400 11654000 6762900 8782300 13878000 35429 3863 31961 296279;296280;296281;296282;296283;296284;296285;296286;296287;296288;296289;296290;296291;296292 234593;234594;234595;234596;234597;234598;234599;234600;234601;234602;234603;234604;234605;234606 234596 14 MLENTDNSSPSTEHSQGLEK Oxidation (M) 2218.9648 0.96481965 3863 Q96H79 ZC3HAV1L Zinc finger CCCH-type antiviral protein 1-like yes yes 0 1 0 By matching By MS/MS 2.33 0.471 2 1 1 2 28.313 23.61 3 1.0145E-99 31164 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 171.35 157.1 70559000 3220300 67339000 0 0 0 0 0 0 0 0 0 0 0 0 0 35430 3863 31961 296293;296294;296295 234607;234608;234609 234607 5373 3 MLEQLDMR 2 Oxidation (M) 1066.4787 0.47871577 2347;118 O00148;Q13838 DDX39A;DDX39B ATP-dependent RNA helicase DDX39A;Spliceosome RNA helicase DDX39B no no 0 2 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 1 1 1 1 2 1 2 1 2 1 29.118 29.35 2 0.0026779 32122 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 86.794 64.663 183930000 0 0 0 8693200 3560300 10905000 11069000 4621800 4480600 34177000 8960300 37635000 12155000 23039000 24635000 35431 118;2347 31962 296296;296297;296298;296299;296300;296301;296302;296303;296304;296305;296306;296307;296308;296309;296310 234610;234611;234612;234613;234614;234615;234616;234617;234618;234619 234610 152;153 9 MLEQLDMR Oxidation (M) 1050.4838 0.48380115 2347;118 O00148;Q13838 DDX39A;DDX39B ATP-dependent RNA helicase DDX39A;Spliceosome RNA helicase DDX39B no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 41.136 41.33 2 0.01087 46027 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 67.169 26.597 69688000 0 0 0 6159900 3407500 0 4954400 0 3870700 10847000 8649800 9398600 7168200 5279100 9952200 35432 118;2347 31962 296311;296312;296313;296314;296315;296316;296317;296318;296319;296320;296321 234620;234621;234622;234623;234624;234625;234626;234627;234628 234621 152;153 9 MLEQLDMR Unmodified 1034.4889 0.48888653 2347;118 O00148;Q13838 DDX39A;DDX39B ATP-dependent RNA helicase DDX39A;Spliceosome RNA helicase DDX39B no no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.193 56.318 2 0.006803 62766 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.19 83.602 167620000 0 0 0 6559100 5270300 19131000 8358600 8356800 5668300 19124000 13805000 13462000 8987300 15569000 43331000 35433 118;2347 31962 296322;296323;296324;296325;296326;296327;296328;296329;296330;296331;296332;296333 234629;234630;234631;234632;234633;234634;234635;234636;234637 234631 8 MLEQLDMRR Unmodified 1190.59 0.58999756 2347;118 O00148;Q13838 DDX39A;DDX39B ATP-dependent RNA helicase DDX39A;Spliceosome RNA helicase DDX39B no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 2 1 2 1 2 2 2 47.264 47.61 2;3 0.0031969 53723 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 65.305 35.832 379550000 0 0 0 0 0 56428000 12289000 26026000 0 34273000 39877000 37145000 28874000 36036000 108600000 35434 118;2347 31963 296334;296335;296336;296337;296338;296339;296340;296341;296342;296343;296344;296345;296346;296347 234638;234639;234640 234638 2 MLEQLDMRR Oxidation (M) 1206.5849 0.58491218 2347;118 O00148;Q13838 DDX39A;DDX39B ATP-dependent RNA helicase DDX39A;Spliceosome RNA helicase DDX39B no no 0 1 1 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 36.627 36.872 3 0.0054342 39511 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.528 33.216 145860000 0 0 0 0 8236700 30502000 0 0 11117000 16657000 0 22445000 15900000 13531000 27466000 35435 118;2347 31963 296348;296349;296350;296351;296352;296353;296354;296355 234641 234641 152;153 1 MLESITNELSLFSK Unmodified 1610.8226 0.82255949 3835 Q96F86 EDC3 Enhancer of mRNA-decapping protein 3 yes yes 0 0 0 By MS/MS 2 0 1 1 97.263 92.489 2 0.00082071 114525 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.163 58.859 18642000 0 18642000 0 0 0 0 0 0 0 0 0 0 0 0 0 35436 3835 31964 296356 234642 234642 1 MLEVFHAIK Unmodified 1086.5896 0.58958685 1720 P53618 COPB1 Coatomer subunit beta yes yes 0 0 0 By MS/MS 2 0 1 1 79.213 71.083 2 0.0055857 93456 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 108.46 81.331 5020700 5020700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35437 1720 31965 296357 234643 234643 1 MLEVFVLK Oxidation (M) 993.55689 0.55688974 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 1 0 By MS/MS By matching 10 0 2 1 1 79.451 79.434 2 0.018149 92002 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 57.281 33.309 8206900 0 0 0 0 2577900 0 0 0 0 0 0 0 0 0 5629000 35438 5189 31966 296358;296359 234644 234644 6583 1 MLEYALK Unmodified 866.45718 0.45717569 371;4606;2225 O43815;Q9NRL3;Q13033 STRN;STRN4;STRN3 Striatin;Striatin-4;Striatin-3 no no 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 60.033 52.991 2 0.031598 71500 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.734 62.625 135560000 7676500 127880000 0 0 0 0 0 0 0 0 0 0 0 0 0 35439 371;4606;2225 31967 296360;296361 234645;234646 234646 2 MLEYALK Oxidation (M) 882.45209 0.45209032 371;4606;2225 O43815;Q9NRL3;Q13033 STRN;STRN4;STRN3 Striatin;Striatin-4;Striatin-3 no no 0 1 0 By matching By MS/MS 3 0 2 1 1 48.494 43.34 2 0.02724 53991 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 89.673 46.9 2953800 211680 2742100 0 0 0 0 0 0 0 0 0 0 0 0 0 35440 371;4606;2225 31967 296362;296363 234647 234647 1 MLFATPPSSTYEK Unmodified 1470.7065 0.7064671 3793 Q96DB5 RMDN1 Regulator of microtubule dynamics protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 76.542 68.412 2 3.8686E-21 90146 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 142.83 99.019 51401000 51401000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35441 3793 31968 296364 234648 234648 1 MLFDYLADK Oxidation (M) 1130.5318 0.5317972 1809 P60228 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 76.062 76.123 2 0.0034329 87611 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 80.165 69.698 253230000 0 0 0 11942000 14342000 20968000 15967000 15209000 15345000 29105000 30586000 32896000 22183000 9732700 34951000 35442 1809 31969 296365;296366;296367;296368;296369;296370;296371;296372;296373;296374;296375;296376;296377;296378;296379;296380;296381;296382;296383;296384;296385;296386;296387;296388 234649;234650;234651;234652;234653;234654;234655;234656;234657;234658;234659;234660;234661;234662;234663;234664;234665;234666;234667;234668;234669;234670;234671 234650 2934 21 MLFDYLADK Unmodified 1114.5369 0.53688258 1809 P60228 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 82.624 82.055 2 0.0094522 95165 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.692 48.656 118630000 7175700 0 0 2341400 2497200 7947700 3150200 7116600 3424600 8504700 10167000 14722000 5919000 11487000 34181000 35443 1809 31969 296389;296390;296391;296392;296393;296394;296395;296396;296397;296398;296399;296400;296401 234672;234673;234674;234675;234676;234677;234678;234679;234680;234681;234682;234683;234684;234685 234672 14 MLFYSFFK Oxidation (M) 1097.5256 0.52558961 5137 Q9Y333 LSM2 U6 snRNA-associated Sm-like protein LSm2 yes yes 0 1 0 By MS/MS 10 0 1 1 86.241 86.409 2 0.038586 99874 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.395 26.07 3468700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3468700 35444 5137 31970 296402 234686 234686 1 MLGEDGQVIGPSQESAGEVGALDK Unmodified 2386.1322 0.13221932 2461 Q14999 CUL7 Cullin-7 yes yes 0 0 0 By MS/MS 2 0 1 1 77.904 73.129 3 0.018089 91214 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 27.09 9.2662 27448000 0 27448000 0 0 0 0 0 0 0 0 0 0 0 0 0 35445 2461 31971 296403 234687 234687 0 MLGEDSDEEEEMDTSERK Unmodified 2128.8413 0.84125862 4215 Q9BWU0 SLC4A1AP Kanadaptin yes yes 0 0 1 By MS/MS 10 0 1 1 38.97 39.711 3 0.021829 43163 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 23.434 22.744 5534500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5534500 35446 4215 31972 296404 234688 234688 1 MLGPEGGEGFVVK Acetyl (Protein N-term) 1360.6697 0.66968766 1692 P52597 HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.65 3.66 1 3 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 87.48 86.848 2 1.5244E-08 98521 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 108.67 98.144 1731300000 319760000 786350000 0 18071000 26213000 36725000 27177000 36179000 22348000 60591000 57230000 61729000 43421000 66418000 169050000 35447 1692 31973 296405;296406;296407;296408;296409;296410;296411;296412;296413;296414;296415;296416;296417;296418;296419;296420;296421 234689;234690;234691;234692;234693;234694;234695;234696;234697;234698;234699;234700;234701;234702;234703;234704;234705;234706;234707 234702 19 MLGPEGGEGFVVK Acetyl (Protein N-term);Oxidation (M) 1376.6646 0.66460229 1692 P52597 HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.87 3.86 1 3 2 9 3 2 1 1 1 1 1 1 1 1 1 1 80.139 79.007 2 1.4502E-13 90722 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 121.83 99.09 1683000000 376620000 315530000 6933400 74290000 69071000 0 103100000 0 70845000 0 120820000 132780000 130950000 122700000 159350000 35448 1692 31973 296422;296423;296424;296425;296426;296427;296428;296429;296430;296431;296432;296433;296434;296435;296436 234708;234709;234710;234711;234712;234713;234714;234715;234716;234717;234718;234719;234720;234721;234722;234723 234713 2736 16 MLGPEGGEGFVVK Oxidation (M) 1334.654 0.6540376 1692 P52597 HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 67.642 62.339 2 0.019619 79793 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 50.297 28.79 36606000 0 36606000 0 0 0 0 0 0 0 0 0 0 0 0 0 35449 1692 31973 296437;296438 234724 234724 2736 1 MLGPPLEVLK Unmodified 1095.6362 0.63620269 3859 Q96GX5 MASTL Serine/threonine-protein kinase greatwall yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 83.526 82.408 2 0.0084193 104806 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.334 57.814 139150000 31916000 56159000 6263600 1528100 1786900 3510400 1870000 3621300 2933300 3089400 4196500 4056600 2524400 5869300 9824700 35450 3859 31974 296439;296440;296441;296442;296443;296444;296445;296446;296447;296448;296449;296450;296451;296452;296453;296454 234725;234726;234727;234728;234729;234730;234731;234732;234733;234734;234735 234731 11 MLGPPLEVLK Oxidation (M) 1111.6311 0.63111731 3859 Q96GX5 MASTL Serine/threonine-protein kinase greatwall yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 6.12 3.89 3 1 4 1 2 1 1 1 1 1 80.379 78.002 2 0.004641 90694 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 63.419 38.496 125660000 20646000 54981000 14415000 7750000 7523600 0 8448900 0 0 0 0 0 0 0 11895000 35451 3859 31974 296455;296456;296457;296458;296459;296460;296461;296462 234736;234737;234738;234739;234740 234740 5368 5 MLGQMTDQVADLR 2 Oxidation (M) 1508.6963 0.69631312 1073 P18206 VCL Vinculin yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 2 1 1 1 1 48.909 49.061 2 8.1713E-09 55288 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 107.83 91.607 88906000 0 0 0 7528600 0 12652000 7740400 5042200 0 11339000 13524000 0 0 9575700 21504000 35452 1073 31975 296463;296464;296465;296466;296467;296468;296469;296470;296471;296472;296473;296474 234741;234742;234743;234744;234745;234746;234747;234748;234749;234750;234751;234752 234741 1535;1536 12 MLGQMTDQVADLR Oxidation (M) 1492.7014 0.7013985 1073 P18206 VCL Vinculin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 64.719 64.958 2 8.3311E-14 73505 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 141.88 124.85 66388000 0 0 0 0 0 6979700 5056000 0 0 7077100 8685800 12023000 5707100 7404000 13455000 35453 1073 31975 296475;296476;296477;296478;296479;296480;296481;296482 234753;234754;234755;234756;234757;234758;234759;234760 234756 1535;1536 7 MLGQMTDQVADLR Unmodified 1476.7065 0.70648388 1073 P18206 VCL Vinculin yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 71.826 72.12 2 1.2412E-06 82339 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 117.14 107.35 58009000 0 0 0 0 0 0 0 20858000 0 0 0 0 0 0 37150000 35454 1073 31975 296483;296484 234761;234762 234761 2 MLGTEGGEGFVVK Acetyl (Protein N-term) 1364.6646 0.66460229 1309 P31943 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.22 1 1 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 86.117 86.003 2 9.096E-22 91142 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 171.85 139.92 610830000 94950000 209280000 0 0 15515000 22598000 18212000 24495000 13944000 28079000 33257000 32270000 22837000 29272000 66128000 35455 1309 31976 296485;296486;296487;296488;296489;296490;296491;296492;296493;296494;296495;296496;296497;296498;296499 234763;234764;234765;234766;234767;234768;234769;234770;234771;234772;234773;234774;234775;234776;234777 234770 15 MLGTEGGEGFVVK Unmodified 1322.654 0.6540376 1309 P31943 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 7.33 3.77 2 4 1 1 1 1 1 1 66.751 65.263 2 0.029996 83117 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 46.475 23.735 80898000 0 64365000 1183900 0 1971300 0 0 0 0 3188100 0 4810600 0 0 5378600 35456 1309 31976 296500;296501;296502;296503;296504;296505 234778;234779 234779 2 MLGTEGGEGFVVK Acetyl (Protein N-term);Oxidation (M) 1380.6595 0.65951691 1309 P31943 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.29 4.1 1 3 3 2 1 1 1 1 1 80.686 80.201 2 8.5803E-26 89811 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 157.95 118.8 138490000 86041000 1693000 300200 0 10942000 0 39514000 0 0 0 0 0 0 0 0 35457 1309 31976 296506;296507;296508;296509;296510;296511;296512 234780;234781;234782;234783;234784;234785 234783 1936 6 MLGTEGGEGFVVK Oxidation (M) 1338.649 0.64895222 1309 P31943 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed yes yes 0 1 0 By MS/MS 2 0 1 1 62.587 56.694 2 0.0026722 72692 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.562 37.409 44466000 0 44466000 0 0 0 0 0 0 0 0 0 0 0 0 0 35458 1309 31976 296513 234786;234787 234786 1936 2 MLHDVTMQLIEK Oxidation (M) 1472.7367 0.73672137 5398 yes no 0 1 0 By MS/MS 2 0 1 1 80.512 75.8 2 0.014115 94338 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 57.96 16.256 + 112810000 0 112810000 0 0 0 0 0 0 0 0 0 0 0 0 0 35459 5398 31977 296514 234788 234788 6769 1 MLHVDPHQR Oxidation (M) 1147.5557 0.55566096 2531;1672 Q15418;P51812;Q15349 RPS6KA1;RPS6KA3;RPS6KA2 Ribosomal protein S6 kinase alpha-1;Ribosomal protein S6 kinase alpha-3;Ribosomal protein S6 kinase alpha-2 no no 0 1 0 By MS/MS 10 0 1 1 13.482 13.991 3 0.02887 12977 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 46.447 25.576 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35460 2531;1672 31978 296515 234789 234789 1 MLIEDVDALK Oxidation (M) 1161.5951 0.59512574 4822 Q9P2N5 RBM27 RNA-binding protein 27 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 67.638 67.641 2 0.0089304 78425 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 51.193 29.511 43324000 0 0 0 5336900 4666300 4950700 3877000 3307800 3739600 6833700 0 6524400 0 4088100 0 35461 4822 31979 296516;296517;296518;296519;296520;296521;296522;296523;296524 234790;234791;234792 234792 6197 3 MLIEDVDALK Unmodified 1145.6002 0.60021112 4822 Q9P2N5 RBM27 RNA-binding protein 27 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 76.782 76.451 2 0.0028756 94634 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.802 83.329 100820000 0 68951000 0 0 0 2133400 2064400 2936900 1765500 3796100 3538400 5898600 2499200 0 7236800 35462 4822 31979 296525;296526;296527;296528;296529;296530;296531;296532;296533;296534 234793;234794;234795;234796;234797 234794 5 MLINGESGQAK Oxidation (M) 1162.5652 0.56522259 576 O76074 PDE5A cGMP-specific 3',5'-cyclic phosphodiesterase yes yes 0 1 0 By MS/MS 10 0 1 1 36.158 36.165 2 0.032542 40397 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 53.968 13.7 13948000 0 0 0 0 0 13948000 0 0 0 0 0 0 0 0 0 35463 576 31980 296535 234798 234798 0 MLIPQLK Unmodified 841.50955 0.50954561 4720 Q9NX70 MED29 Mediator of RNA polymerase II transcription subunit 29 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 71.547 71.64 2 0.046463 81567 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.897 8.4448 58040000 0 0 0 1247800 0 4412800 4540300 6578500 4619200 5368700 9896800 0 0 6426300 14950000 35464 4720 31981 296536;296537;296538;296539;296540;296541;296542;296543;296544 234799 234799 1 MLIQENQELGR Oxidation (M) 1345.666 0.66599927 2470 Q15007 WTAP Pre-mRNA-splicing regulator WTAP yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 43.637 43.629 2 0.00057188 48790 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 76.679 61.814 46074000 0 0 0 5506400 6016100 8915700 4690800 0 0 5832900 8535900 0 0 6576600 0 35465 2470 31982 296545;296546;296547;296548;296549;296550;296551;296552;296553 234800;234801;234802;234803;234804;234805;234806;234807 234802 4067 8 MLISAGGYIK Unmodified 1051.5736 0.57360243 204 O14727 APAF1 Apoptotic protease-activating factor 1 yes yes 0 0 0 By MS/MS 2 0 1 1 76.262 68.131 2 0.03916 89868 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.37 24.758 7829000 7829000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35466 204 31983 296554 234808 234808 1 MLISILTER Oxidation (M) 1090.6056 0.60563084 968 P12429 ANXA3 Annexin A3 yes yes 0 1 0 By MS/MS 10 0 1 1 76.921 77.208 2 0.032178 88694 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.91 31.761 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35467 968 31984 296555 234809 234809 1 MLISSIK Oxidation (M) 806.45718 0.45717569 1244 P29218 IMPA1 Inositol monophosphatase 1 yes yes 0 1 0 By MS/MS 3 0 1 1 43.436 38.663 2 0.048817 48031 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 74.415 28.064 14548000 0 14548000 0 0 0 0 0 0 0 0 0 0 0 0 0 35468 1244 31985 296556 234810 234810 1 MLIYDPAK Oxidation (M) 965.4892 0.4892041 822 P06493 CDK1 Cyclin-dependent kinase 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 48.173 46.639 2 0.0075146 60018 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.78 89.784 705360000 18811000 332140000 21245000 18303000 19541000 33804000 30940000 20785000 22251000 35582000 33047000 35332000 28911000 23138000 31529000 35469 822 31986 296557;296558;296559;296560;296561;296562;296563;296564;296565;296566;296567;296568;296569;296570;296571;296572;296573 234811;234812;234813;234814;234815;234816;234817;234818;234819;234820;234821;234822;234823;234824;234825;234826 234815 987 15 MLIYDPAK Unmodified 949.49429 0.49428948 822 P06493 CDK1 Cyclin-dependent kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 58.208 57.95 2 0.027721 66534 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 57.177 31.283 597020000 0 23397000 0 29490000 33843000 55674000 45750000 30714000 30566000 55339000 55056000 58481000 37189000 53236000 88288000 35470 822 31986 296574;296575;296576;296577;296578;296579;296580;296581;296582;296583;296584;296585;296586 234827;234828;234829;234830;234831;234832;234833;234834 234834 8 MLKPQPLQQPSQPQQPPPTQQAVAR Acetyl (Protein N-term);Oxidation (M) 2850.481 0.48104604 3576 Q8WWM7 ATXN2L Ataxin-2-like protein yes yes 1 1 1 By MS/MS By MS/MS 10 0 2 1 1 64.418 64.227 3 4.1523E-13 73627 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 60.991 58.242 19647000 0 0 0 0 9147800 0 0 0 0 10499000 0 0 0 0 0 35471 3576 31987 296587;296588 234835;234836 234835 5071 2 MLKPQPLQQPSQPQQPPPTQQAVAR Acetyl (Protein N-term) 2834.4861 0.48613142 3576 Q8WWM7 ATXN2L Ataxin-2-like protein yes yes 1 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 72.867 72.838 3 8.8485E-13 83544 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.991 55.197 42560000 0 0 0 3570600 5539800 0 4040700 6277200 0 10654000 0 0 0 0 12478000 35472 3576 31987 296589;296590;296591;296592;296593;296594 234837 234837 1 MLLAQINR Acetyl (Protein N-term) 999.55354 0.55353569 1698 P52747 ZNF143 Zinc finger protein 143 yes yes 1 0 0 By MS/MS By MS/MS 10 0 2 1 1 88.272 88.352 2 0.038815 102454 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 60.788 49.419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35473 1698 31988 296595;296596 234838;234839 234839 2 MLLAQINR Acetyl (Protein N-term);Oxidation (M) 1015.5485 0.54845032 1698 P52747 ZNF143 Zinc finger protein 143 yes yes 1 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 77.946 78.097 2 0.0061987 89963 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 47.916 30.068 31259000 0 0 0 0 0 3107300 3274400 0 2845400 6017100 4066500 5026100 0 3080200 3841700 35474 1698 31988 296597;296598;296599;296600;296601;296602;296603;296604 234840 234840 2749 1 MLLDLQTK Oxidation (M) 976.52632 0.52631789 478 O75330 HMMR Hyaluronan mediated motility receptor yes yes 0 1 0 By matching By MS/MS 10 0 2 1 1 53.373 53.713 2 0.039668 61467 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 44.117 10.114 17003000 0 0 0 0 0 0 0 0 0 0 13166000 0 3836900 0 0 35475 478 31989 296605;296606 234841 234841 1 MLLDPMGGIVMTNDGNAILR 3 Oxidation (M) 2178.0483 0.048295461 1570 P49368 CCT3 T-complex protein 1 subunit gamma yes yes 0 3 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 1 2 2 1 2 2 2 2 2 2 2 81.054 81.146 2;3 1.672E-53 93612 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 122.97 102.3 687590000 0 0 0 6167900 12878000 71495000 37347000 21132000 37089000 102790000 88920000 90115000 49648000 56879000 113130000 35476 1570 31990 296607;296608;296609;296610;296611;296612;296613;296614;296615;296616;296617;296618;296619;296620;296621;296622;296623;296624;296625;296626;296627 234842;234843;234844;234845;234846;234847;234848;234849;234850;234851;234852;234853;234854;234855;234856;234857;234858;234859;234860 234845 2513;2514;2515 17 MLLDPMGGIVMTNDGNAILR 2 Oxidation (M) 2162.0534 0.053380839 1570 P49368 CCT3 T-complex protein 1 subunit gamma yes yes 0 2 0 By MS/MS By MS/MS By MS/MS 10 0 5 2 1 2 88.235 88.38 2;3 4.351E-08 102247 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.935 61.143 24449000 0 0 0 0 0 0 0 0 0 9493900 3183000 0 0 0 11772000 35477 1570 31990 296628;296629;296630;296631;296632 234861;234862;234863;234864 234863 2513;2514;2515 4 MLLDPMGGIVMTNDGNAILR Oxidation (M) 2146.0585 0.058466216 1570 P49368 CCT3 T-complex protein 1 subunit gamma yes yes 0 1 0 By MS/MS 10 0 1 1 91.403 91.541 2 4.66E-11 106042 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.763 57.533 1297000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1297000 35478 1570 31990 296633 234865 234865 2513;2514;2515 1 MLLDSEQHPCQLK Unmodified 1597.7592 0.75924773 3772 Q96C36 PYCR2 Pyrroline-5-carboxylate reductase 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 53.108 49.195 3 0.0057519 61595 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 49.423 37.258 7789700 0 0 7789700 0 0 0 0 0 0 0 0 0 0 0 0 35479 3772 31991 296634;296635 234866;234867 234867 2 MLLEAENDK Oxidation (M) 1077.5012 0.50122535 2793 Q5TBA9 FRY Protein furry homolog yes yes 0 1 0 By matching By matching By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 26.817 27.279 2 0.014019 28103 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 52.403 21.174 19521000 0 0 0 0 0 0 0 0 3287100 0 3346300 3875200 0 2424200 6588200 35480 2793 31992 296636;296637;296638;296639;296640 234868;234869 234869 4426 2 MLLEEIK Unmodified 874.48339 0.48339044 1498 P46100 ATRX Transcriptional regulator ATRX yes yes 0 0 0 By MS/MS 2 0 1 1 69.864 63.995 2 0.032088 81453 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.866 19.831 29796000 0 29796000 0 0 0 0 0 0 0 0 0 0 0 0 0 35481 1498 31993 296641 234870 234870 1 MLLELSEEHK Oxidation (M) 1243.6118 0.61183843 3192 Q86X83 COMMD2 COMM domain-containing protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 4 1 1 2 51.362 45.946 2;3 0.0033434 57178 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 92.439 49.193 47782000 8368500 13445000 25969000 0 0 0 0 0 0 0 0 0 0 0 0 35482 3192 31994 296642;296643;296644;296645 234871;234872;234873 234872 4816 2 MLLELSEEHK Unmodified 1227.6169 0.61692381 3192 Q86X83 COMMD2 COMM domain-containing protein 2 yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 63.706 57.673 3 0.023342 77798 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.908 32.215 10534000 9681500 0 852360 0 0 0 0 0 0 0 0 0 0 0 0 35483 3192 31994 296646;296647 234874 234874 1 MLLFVEQVASK Acetyl (Protein N-term) 1305.7003 0.70025951 3029 Q71RC2 LARP4 La-related protein 4 yes yes 1 0 0 By MS/MS 2 0 1 1 104.41 96.278 2 0.0018888 123677 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.338 70.186 2354800 2354800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35484 3029 31995 296648 234875 234875 1 MLLGDEK Oxidation (M) 820.40005 0.40005474 589 O94822 LTN1 E3 ubiquitin-protein ligase listerin yes yes 0 1 0 By MS/MS 2 0 1 1 24.512 20.384 2 0.026604 27095 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.467 40.894 19128000 0 19128000 0 0 0 0 0 0 0 0 0 0 0 0 0 35485 589 31996 296649 234876 234876 1 MLLHEGQHPAQLR Unmodified 1528.7933 0.79326547 2705 Q53H96 PYCRL Pyrroline-5-carboxylate reductase 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 18 2 1 2 1 2 2 1 1 2 2 2 36.174 36.364 3;4 0.00040581 38814 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 92.781 75.06 191190000 0 0 0 9649900 3183700 24610000 10876000 29526000 16710000 7468700 8670900 32464000 0 10377000 37657000 35486 2705 31997 296650;296651;296652;296653;296654;296655;296656;296657;296658;296659;296660;296661;296662;296663;296664;296665;296666;296667 234877;234878;234879;234880;234881;234882;234883 234883 6 MLLHEGQHPAQLR Oxidation (M) 1544.7882 0.78818009 2705 Q53H96 PYCRL Pyrroline-5-carboxylate reductase 3 yes yes 0 1 0 By matching By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 29.783 29.995 3 0.0004554 32714 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 62.528 55.799 71632000 0 0 0 0 0 14940000 16371000 13786000 0 7131100 0 19404000 0 0 0 35487 2705 31997 296668;296669;296670;296671;296672 234884;234885 234885 4360 2 MLLNLHK Oxidation (M) 883.49496 0.49495818 161 O00487 PSMD14 26S proteasome non-ATPase regulatory subunit 14 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 37.54 36.345 2 0.015396 40231 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 88.734 40.561 191470000 56355000 27554000 0 13063000 16362000 18242000 7148100 7087900 6252000 0 30631000 0 8774000 0 0 35488 161 31998 296673;296674;296675;296676;296677;296678;296679;296680;296681;296682 234886;234887;234888;234889;234890;234891;234892;234893;234894 234894 223 9 MLLPNILLTGTPGVGK Oxidation (M) 1638.9379 0.93786402 5162 Q9Y3D8 AK6 Adenylate kinase isoenzyme 6 yes yes 0 1 0 By MS/MS 10 0 1 1 91.158 91.296 2 0.00043064 105529 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.255 60.255 3474300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3474300 35489 5162 31999 296683 234895 234895 6537 1 MLLPNILLTGTPGVGK Unmodified 1622.9429 0.9429494 5162 Q9Y3D8 AK6 Adenylate kinase isoenzyme 6 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 96.811 92.819 2 0.0071888 110284 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.266 32.733 10027000 8676600 0 0 0 0 0 0 0 0 0 0 0 0 0 1350700 35490 5162 31999 296684;296685 234896;234897 234896 2 MLLQSSEGR Oxidation (M) 1035.5019 0.50189405 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 1 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 21.548 21.756 2 0.0027586 21391 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 87.639 54.089 97327000 0 0 0 0 0 14452000 10864000 23299000 11123000 0 0 0 0 17224000 20365000 35491 528 32000 296686;296687;296688;296689;296690;296691 234898;234899 234899 689 2 MLLSAPSENDR Unmodified 1231.5867 0.58668632 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 48.557 48.733 2 0.011536 54942 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 55.908 42.855 42985000 0 0 0 0 0 10122000 0 0 6765100 11681000 0 0 14417000 0 0 35492 3443 32001 296692;296693;296694;296695 234900;234901;234902;234903 234903 4 MLLSAPSENDR Oxidation (M) 1247.5816 0.58160094 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 39.642 39.513 2 0.0036818 43848 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 58.676 44.907 25529000 0 0 0 4354200 4752500 5400900 0 5713200 5307700 0 0 0 0 0 0 35493 3443 32001 296696;296697;296698;296699;296700;296701;296702 234904;234905;234906;234907;234908;234909;234910 234907 4984 4 MLLSLPEK Unmodified 929.52559 0.52558961 3308 Q8N163 CCAR2 Cell cycle and apoptosis regulator protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72.067 71.585 2 0.010849 81250 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.324 60.629 652530000 0 466120000 20854000 6930800 7232000 12993000 8894700 11355000 6866300 15731000 15597000 17460000 10938000 16750000 34813000 35494 3308 32002 296703;296704;296705;296706;296707;296708;296709;296710;296711;296712;296713;296714;296715;296716 234911;234912;234913;234914;234915;234916;234917;234918;234919;234920;234921;234922 234915 12 MLLSLPEK Oxidation (M) 945.5205 0.52050423 3308 Q8N163 CCAR2 Cell cycle and apoptosis regulator protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 4 3.46 3 1 1 1 1 1 66.187 61.748 2 0.024735 70062 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 51.346 14.759 260680000 46627000 165970000 20403000 0 0 0 0 0 0 0 0 0 27681000 0 0 35495 3308 32002 296717;296718;296719;296720 234923;234924 234924 2 MLLSQNESQK Oxidation (M) 1192.5758 0.57578728 2662 Q32NC0 C18orf21 UPF0711 protein C18orf21 yes yes 0 1 0 By MS/MS By MS/MS 6 4 1 1 1 1 19.702 19.864 2 0.0094915 20389 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 50.703 35.322 1345300 0 0 0 0 0 0 0 0 0 1345300 0 0 0 0 0 35496 2662 32003 296721;296722 234925;234926 234925 4333 2 MLLSWDGGESR Unmodified 1249.5761 0.57612163 2841 Q658Y4 FAM91A1 Protein FAM91A1 yes yes 0 0 0 By MS/MS 10 0 1 1 71.925 72.327 2 0.035522 82733 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.556 3.6343 6311800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6311800 35497 2841 32004 296723 234927 234927 1 MLLTEILLDVTDEEIYYVAK Unmodified 2370.228 0.22801719 3523 Q8TF01 PNISR Arginine/serine-rich protein PNISR yes yes 0 0 0 By MS/MS 2 0 1 1 106.14 98.011 3 6.3132E-07 125771 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.737 62.939 4705600 4705600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35498 3523 32005 296724 234928 234928 1 MLLVDELR Unmodified 987.5423 0.54230231 1071 P18085 ARF4 ADP-ribosylation factor 4 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 77.852 77.928 2 0.017183 90111 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.073 23.3 36525000 0 0 0 0 2404100 4267600 4075400 0 0 3753900 5281400 0 0 3074000 13669000 35499 1071 32006 296725;296726;296727;296728;296729;296730;296731 234929;234930;234931 234929 3 MLLVDELR Oxidation (M) 1003.5372 0.53721693 1071 P18085 ARF4 ADP-ribosylation factor 4 yes yes 0 1 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 68.089 68.03 2 0.01132 78952 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 66.073 24.571 29849000 0 0 0 2876200 3824800 5874700 6339600 3881800 0 0 0 0 0 0 7051600 35500 1071 32006 296732;296733;296734;296735;296736;296737;296738 234932;234933;234934;234935;234936 234936 1521 5 MLLYTEVTR Oxidation (M) 1140.5849 0.5848954 1620;1294 P50395;P31150 GDI2;GDI1 Rab GDP dissociation inhibitor beta;Rab GDP dissociation inhibitor alpha no no 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 2 1 55.921 56.052 2 0.0055125 62944 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 69.825 35.017 71739000 0 0 0 7109000 2734600 2305600 0 0 2331700 4184500 11621000 8551900 2962300 7980900 21958000 35501 1620;1294 32007 296739;296740;296741;296742;296743;296744;296745;296746;296747;296748;296749 234937;234938;234939;234940;234941;234942;234943 234942 1904 7 MLLYTEVTR Unmodified 1124.59 0.58998078 1620;1294 P50395;P31150 GDI2;GDI1 Rab GDP dissociation inhibitor beta;Rab GDP dissociation inhibitor alpha no no 0 0 0 By MS/MS 10 0 1 1 66.688 67.106 2 0.020738 76751 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 52.867 17.618 11048000 0 0 0 0 0 0 0 0 0 0 0 11048000 0 0 0 35502 1620;1294 32007 296750 234944 234944 1 MLNGLEDSIGLSK Oxidation (M) 1391.6966 0.6966307 1464 P42704 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.71 3.81 2 1 4 2 1 1 1 1 1 72.737 69.772 2 3.9092E-13 87769 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.36 71.938 106480000 0 98675000 3367100 0 0 0 0 0 0 4442700 0 0 0 0 0 35503 1464 32008 296751;296752;296753;296754;296755;296756;296757 234945;234946;234947;234948;234949;234950;234951 234947 2301 7 MLNGLEDSIGLSK Unmodified 1375.7017 0.70171607 1464 P42704 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 79.568 75.898 2 1.0021E-21 94320 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 146.16 93.446 136060000 0 133700000 2354700 0 0 0 0 0 0 0 0 0 0 0 0 35504 1464 32008 296758;296759 234952;234953 234952 2 MLNHENVVK Unmodified 1082.5543 0.55426398 210 O14757 CHEK1 Serine/threonine-protein kinase Chk1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 24.519 20.522 2 0.00061025 26347 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 122.52 68.359 10774000 7044200 0 3729400 0 0 0 0 0 0 0 0 0 0 0 0 35505 210 32009 296760;296761 234954 234954 1 MLNHVLNICEK Oxidation (M) 1385.6795 0.67954084 4310 Q9GZZ1 NAA50 N-alpha-acetyltransferase 50 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 1 2 2 4 2 1 2 2 47.466 47.62 2;3 1.3007E-05 53211 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 128.81 103.67 2003100000 0 0 0 62225000 119550000 172810000 128540000 237910000 161550000 217760000 340220000 562560000 0 0 0 35506 4310 32010 296762;296763;296764;296765;296766;296767;296768;296769;296770;296771;296772;296773;296774;296775;296776;296777;296778 234955;234956;234957;234958;234959;234960;234961;234962;234963;234964;234965;234966;234967;234968;234969;234970;234971;234972;234973;234974;234975;234976;234977;234978;234979;234980 234976 5771 20 MLNHVLNICEK Unmodified 1369.6846 0.68462622 4310 Q9GZZ1 NAA50 N-alpha-acetyltransferase 50 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 2 2 1 2 2 57.888 57.048 2;3 1.5616E-05 63809 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 134.84 102.11 1364800000 41591000 29157000 0 0 62241000 92309000 19470000 140800000 116370000 1669900 210190000 651000000 0 0 0 35507 4310 32010 296779;296780;296781;296782;296783;296784;296785;296786;296787;296788;296789;296790;296791;296792 234981;234982;234983;234984;234985;234986;234987;234988;234989;234990 234985 8 MLNIHPSLLPSFK Oxidation (M) 1511.817 0.8170206 1134 P22102 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes yes 0 1 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 81.805 80.929 3 0.00019634 93238 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.891 60.26 71783000 11812000 0 0 0 0 0 1601000 2936700 4049300 5838800 5665600 0 2492900 0 37387000 35508 1134 32011 296793;296794;296795;296796;296797;296798;296799;296800 234991;234992;234993 234992 1623 3 MLNIHPSLLPSFK Unmodified 1495.8221 0.82210598 1134 P22102 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 87.697 85.337 3 0.011221 96530 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.357 38.318 16937000 0 9140300 0 0 0 0 0 0 0 0 0 0 0 0 7796600 35509 1134 32011 296801;296802 234994;234995 234995 2 MLNTLQTNAGYLEQVK Oxidation (M) 1837.9244 0.9243988 2119 Q05932 FPGS Folylpolyglutamate synthase, mitochondrial yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 72.591 72.672 2 7.4993E-60 83757 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 174.73 149.26 39879000 0 0 0 0 2408300 7677700 5352200 3227600 3395500 6961900 0 6972600 0 3883000 0 35510 2119 32012 296803;296804;296805;296806;296807;296808;296809;296810;296811;296812 234996;234997;234998;234999;235000;235001;235002;235003 235002 3424 7 MLNVTAPTPQQLQAFK Oxidation (M) 1801.9397 0.93965493 1011 P15056 BRAF Serine/threonine-protein kinase B-raf yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 79.952 80.03 2 8.9288E-05 92467 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 73.781 55.917 21768000 0 0 0 0 1396800 2303700 0 0 1706000 3613600 2624700 0 2177100 1840300 6105500 35511 1011 32013 296813;296814;296815;296816;296817;296818;296819;296820;296821;296822 235004;235005;235006;235007;235008 235004 1399 5 MLPEIDQNK Unmodified 1086.5379 0.53794521 1974 P78344 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45.099 44.077 2 0.0030065 49711 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 91.516 79.747 1205800000 7225200 294650000 2258300 52935000 88440000 94720000 76137000 124280000 81961000 62979000 54811000 47870000 63656000 73833000 80080000 35512 1974 32014 296823;296824;296825;296826;296827;296828;296829;296830;296831;296832;296833;296834;296835;296836;296837 235009;235010;235011;235012;235013;235014;235015;235016;235017;235018;235019;235020;235021;235022;235023;235024;235025;235026;235027;235028;235029;235030;235031;235032 235026 24 MLPEIDQNK Oxidation (M) 1102.5329 0.53285983 1974 P78344 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 37.641 37.085 2 0.0020161 41362 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 91.853 87.314 884610000 0 92654000 1399400 55262000 0 0 78583000 62411000 0 99207000 88201000 125850000 106230000 84405000 90412000 35513 1974 32014 296838;296839;296840;296841;296842;296843;296844;296845;296846;296847;296848 235033;235034;235035;235036;235037;235038;235039;235040;235041 235034 3173 8 MLPEVLYR Oxidation (M) 1035.5423 0.54230231 4468 Q9H9A6 LRRC40 Leucine-rich repeat-containing protein 40 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.982 65.07 2 0.019409 73545 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.122 30.295 116770000 0 0 0 7339900 6844300 10464000 10468000 7855100 5266100 9910000 12019000 15489000 10414000 8817600 11878000 35514 4468 32015 296849;296850;296851;296852;296853;296854;296855;296856;296857;296858;296859;296860 235042;235043;235044;235045;235046;235047 235043 5906 6 MLPLSLLK Oxidation (M) 929.56198 0.56197512 5214 Q9Y4Z0 LSM4 U6 snRNA-associated Sm-like protein LSm4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 81.103 80.487 2 0.038586 92176 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.395 30.619 75142000 0 22311000 5975600 0 0 4974500 5792700 4497700 5216700 6039300 0 0 4707300 5992300 9634700 35515 5214 32016 296861;296862;296863;296864;296865;296866;296867;296868;296869;296870 235048;235049 235049 6615 2 MLPLSLLK Acetyl (Protein N-term);Oxidation (M) 971.57254 0.5725398 5214 Q9Y4Z0 LSM4 U6 snRNA-associated Sm-like protein LSm4 yes yes 1 1 0 By MS/MS 2.5 0.5 1 1 2 97.351 93.326 2 0.010264 115222 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.058 77.058 14134000 0 14134000 0 0 0 0 0 0 0 0 0 0 0 0 0 35516 5214 32016 296871;296872 235050 235050 6615 1 MLPLSLLK Acetyl (Protein N-term) 955.57763 0.57762518 5214 Q9Y4Z0 LSM4 U6 snRNA-associated Sm-like protein LSm4 yes yes 1 0 0 By MS/MS 2.5 0.5 1 1 2 101.34 97.243 2 0.012543 120073 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.252 65.252 16257000 0 16257000 0 0 0 0 0 0 0 0 0 0 0 0 0 35517 5214 32016 296873;296874 235051 235051 1 MLPSTSR Oxidation (M) 806.39564 0.39563807 308 O43242 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 0 1 0 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 12.509 12.835 2 0.047552 11642 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 50.12 29.565 18553000 0 0 0 0 0 0 0 0 1283000 0 6251500 8492600 0 2526400 0 35518 308 32017 296875;296876;296877;296878 235052 235052 1 MLPTIIADNAGYDSADLVAQLR Oxidation (M) 2362.1839 0.18386096 1980 P78371 CCT2 T-complex protein 1 subunit beta yes yes 0 1 0 By MS/MS 10 0 1 1 91.801 91.919 3 9.5866E-06 106702 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 49.528 44.66 2099800 0 0 0 0 0 0 0 0 0 2099800 0 0 0 0 0 35519 1980 32018 296879 235053 235053 3196 1 MLPTLGGEEGVSR Unmodified 1344.6708 0.6707503 5244 Q9Y5Q8 GTF3C5 General transcription factor 3C polypeptide 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.336 61.436 2 0.00089473 70405 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 68.536 53.328 174570000 0 0 0 9472200 9435000 14659000 10399000 14628000 8694100 14798000 17129000 18379000 12703000 16011000 28259000 35520 5244 32019 296880;296881;296882;296883;296884;296885;296886;296887;296888;296889;296890;296891 235054;235055;235056;235057;235058;235059;235060;235061;235062;235063;235064;235065;235066 235063 13 MLPTLGGEEGVSR Oxidation (M) 1360.6657 0.66566492 5244 Q9Y5Q8 GTF3C5 General transcription factor 3C polypeptide 5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 55.441 55.57 2 0.0023546 63097 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 53.08 42.322 86943000 0 0 0 6520600 8025300 8586500 0 0 7381700 7509200 11033000 9138100 11499000 6846000 10403000 35521 5244 32019 296892;296893;296894;296895;296896;296897;296898;296899;296900;296901 235067;235068;235069;235070;235071;235072;235073;235074;235075;235076 235068 6645 4 MLPTLGGEEGVSRIYADPTK Unmodified 2133.0776 0.077604979 5244 Q9Y5Q8 GTF3C5 General transcription factor 3C polypeptide 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 81.316 76.18 3 2.0906E-08 96150 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.301 67.369 91737000 13465000 65552000 12720000 0 0 0 0 0 0 0 0 0 0 0 0 35522 5244 32020 296902;296903;296904 235077;235078;235079 235077 3 MLPTYVCATPDGTEK Oxidation (M) 1697.7641 0.76405833 1702 P52789 HK2 Hexokinase-2 yes yes 0 1 0 By MS/MS 2 0 1 1 61.486 55.61 2 0.00015055 71247 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.229 70.184 36638000 0 36638000 0 0 0 0 0 0 0 0 0 0 0 0 0 35523 1702 32021 296905 235080 235080 2750 1 MLPTYVCATPDGTEK Unmodified 1681.7691 0.76914371 1702 P52789 HK2 Hexokinase-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 5.4 3.77 2 1 2 3 1 1 66.471 60.952 2;3 4.0549E-38 77908 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145.23 120.88 259210000 0 259210000 0 0 0 0 0 0 0 0 0 0 0 0 0 35524 1702 32021 296906;296907;296908;296909;296910 235081;235082;235083;235084;235085 235082 5 MLPVDEFLPVMFDK 2 Oxidation (M) 1711.8201 0.82011665 3395 Q8NBJ5 COLGALT1 Procollagen galactosyltransferase 1 yes yes 0 2 0 By MS/MS 2.5 0.5 1 1 2 96.722 92.696 2 0.0043165 114794 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.241 51.335 28273000 0 28273000 0 0 0 0 0 0 0 0 0 0 0 0 0 35525 3395 32022 296911;296912 235086;235087 235087 4952;4953 2 MLPVDEFLPVMFDK Oxidation (M) 1695.8252 0.82520203 3395 Q8NBJ5 COLGALT1 Procollagen galactosyltransferase 1 yes yes 0 1 0 By MS/MS 2 0 1 1 99.915 95.202 2 0.0015405 117715 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.451 54.478 11356000 0 11356000 0 0 0 0 0 0 0 0 0 0 0 0 0 35526 3395 32022 296913 235088 235088 4952;4953 1 MLPVDEFLPVMFDK Unmodified 1679.8303 0.83028741 3395 Q8NBJ5 COLGALT1 Procollagen galactosyltransferase 1 yes yes 0 0 0 By MS/MS 2 0 1 1 101.37 96.656 2 0.0010826 119456 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.187 71.555 10192000 0 10192000 0 0 0 0 0 0 0 0 0 0 0 0 0 35527 3395 32022 296914 235089 235089 1 MLPYTVNFK Unmodified 1111.5736 0.57360243 4266 Q9BZH6 WDR11 WD repeat-containing protein 11 yes yes 0 0 0 By MS/MS 2 0 1 1 81.113 72.983 2 0.02523 95715 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.352 76.577 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35528 4266 32023 296915 235090 235090 1 MLQADPNK Unmodified 915.4484 0.44840192 5168 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 16.367 16.262 2 0.006079 16662 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 103.91 59.296 305900000 0 60454000 0 13946000 12226000 16545000 15799000 13815000 12266000 22361000 26469000 29657000 17263000 25178000 39919000 35529 5168 32024 296916;296917;296918;296919;296920;296921;296922;296923;296924;296925;296926;296927;296928 235091;235092;235093;235094;235095;235096;235097;235098;235099;235100;235101;235102;235103 235103 12 MLQADPNK Oxidation (M) 931.44332 0.44331654 5168 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 22 2 2 2 2 2 2 2 1 2 2 1 2 9.7808 9.8998 2 0.016765 8014 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 58.687 22.501 111860000 0 0 0 8954200 6353700 9548000 10665000 6727900 8063200 11417000 6771000 16353000 10145000 3868700 12993000 35530 5168 32024 296929;296930;296931;296932;296933;296934;296935;296936;296937;296938;296939;296940;296941;296942;296943;296944;296945;296946;296947;296948;296949;296950 235104;235105;235106;235107;235108;235109;235110;235111;235112 235108 6540 1 MLQAPESVLAEHYQDLR Oxidation (M) 2014.9782 0.97822529 177 O00746 NME4 Nucleoside diphosphate kinase, mitochondrial yes yes 0 1 0 By matching By MS/MS By matching By matching By matching 10 0 5 1 1 1 1 1 76.303 76.434 3 0.00036196 88205 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 50.653 41.834 26308000 0 0 0 0 0 2607700 0 5595400 5543400 3101900 0 9459700 0 0 0 35531 177 32025 296951;296952;296953;296954;296955 235113 235113 249 1 MLQEDELRDAVLLVFANK Oxidation (M) 2119.0983 0.098340421 2012 P84085 ARF5 ADP-ribosylation factor 5 yes yes 0 1 1 By MS/MS 2 0 1 1 99.275 91.144 3 0.0035373 117549 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.382 33.218 8435600 8435600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35532 2012 32026 296956 235114 235114 3264 1 MLQEDELRDAVLLVFANK Unmodified 2103.1034 0.1034258 2012 P84085 ARF5 ADP-ribosylation factor 5 yes yes 0 0 1 By MS/MS 2 0 1 1 100.02 91.894 3 5.4675E-05 118437 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.259 72.679 9526500 9526500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35533 2012 32026 296957 235115 235115 1 MLQEIQTNSK Unmodified 1190.5965 0.59652272 5350 yes yes 0 0 0 By MS/MS By MS/MS 10 0 4 2 2 48.436 47.87 3 0.0073745 54510 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 43.77 7.3453 + 41926000 0 0 0 25171000 16754000 0 0 0 0 0 0 0 0 0 0 35534 5350 32027 296958;296959;296960;296961 235116;235117 235116 2 MLQHAASNK Unmodified 998.49675 0.4967491 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 6.0599 5.3132 2 9.2293E-07 6872 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 176.6 137.77 2755300000 1639100000 779470000 263410000 8579900 9116300 11451000 8326300 7301800 7486400 4142100 0 4517000 3465200 2497700 6440300 35535 1518 32028 296962;296963;296964;296965;296966;296967;296968;296969;296970;296971;296972;296973;296974;296975;296976 235118;235119;235120;235121;235122;235123;235124;235125;235126;235127;235128;235129;235130;235131;235132;235133 235125 13 MLQHAASNK Oxidation (M) 1014.4917 0.49166372 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 1 0 By MS/MS 2 0 2 2 1.1649 -2.1227 2 8.4221E-06 1081 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 155.07 112.47 93084000 93084000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35536 1518 32028 296977;296978 235134;235135;235136;235137;235138;235139;235140;235141;235142 235139 2405 9 MLQHIDYR Unmodified 1074.528 0.52804923 1005 P63162;P14678 SNRPN;SNRPB Small nuclear ribonucleoprotein-associated protein N;Small nuclear ribonucleoprotein-associated proteins B and B' yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 34.143 34.53 2 0.0068677 36845 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.162 68.96 68335000 0 0 0 0 0 0 0 5274800 3641800 6990800 14510000 15166000 2769300 0 19982000 35537 1005 32029 296979;296980;296981;296982;296983;296984;296985 235143;235144;235145;235146;235147 235144 5 MLQHIDYR Oxidation (M) 1090.523 0.52296385 1005 P63162;P14678 SNRPN;SNRPB Small nuclear ribonucleoprotein-associated protein N;Small nuclear ribonucleoprotein-associated proteins B and B' yes no 0 1 0 By MS/MS 10 0 1 1 26.367 26.712 2 0.012162 28609 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 64.42 39.498 4715400 0 0 0 0 0 0 0 0 0 0 0 0 4715400 0 0 35538 1005 32029 296986 235148 235148 1373 1 MLQIQPEK Unmodified 985.52665 0.52665224 3383 Q8NAV1 PRPF38A Pre-mRNA-splicing factor 38A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 42.59 42.721 2 0.011957 47699 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 75.738 36.075 65460000 0 0 0 6300600 4724300 0 4308500 6167800 4354900 7236600 10344000 0 8669400 5673400 7680400 35539 3383 32030 296987;296988;296989;296990;296991;296992;296993;296994;296995;296996 235149;235150;235151;235152;235153;235154;235155 235154 7 MLQIQPEK Oxidation (M) 1001.5216 0.52156686 3383 Q8NAV1 PRPF38A Pre-mRNA-splicing factor 38A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 7 1 1 1 1 1 1 1 32.823 32.862 2 0.032804 35952 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 46.994 24.863 26235000 0 0 0 2869400 2793000 0 3914200 0 5550500 4690400 4003200 0 0 2414800 0 35540 3383 32030 296997;296998;296999;297000;297001;297002;297003 235156 235156 1 MLQNVTPHNK Acetyl (Protein N-term) 1222.6128 0.61284149 1189 P25440 BRD2 Bromodomain-containing protein 2 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 52.75 51.592 2 0.0005288 58443 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 89.698 70.916 35164000 0 12920000 0 0 0 4824700 0 0 0 0 7028500 0 0 0 10391000 35541 1189 32031 297004;297005;297006;297007;297008;297009;297010 235157;235158;235159;235160;235161;235162;235163 235162 7 MLQNVTPHNK Acetyl (Protein N-term);Oxidation (M) 1238.6078 0.60775611 1189 P25440 BRD2 Bromodomain-containing protein 2 yes yes 1 1 0 By MS/MS 2 0 1 1 37.574 32.659 2 0.019259 42635 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 50.805 28.225 10323000 0 10323000 0 0 0 0 0 0 0 0 0 0 0 0 0 35542 1189 32031 297011 235164 235164 1721 1 MLQPCGPPADKPEEN Oxidation (M) 1697.7389 0.73890622 4212 Q9BWJ5 SF3B5 Splicing factor 3B subunit 5 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35.192 34.53 2 6.6807E-06 37387 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.568 77.881 265400000 8838100 62505000 0 7739200 9626400 10182000 15535000 11713000 8904800 12553000 20179000 26966000 21219000 21767000 27673000 35543 4212 32032 297012;297013;297014;297015;297016;297017;297018;297019;297020;297021;297022;297023;297024;297025 235165;235166;235167;235168;235169;235170;235171;235172;235173;235174;235175;235176;235177;235178;235179 235169 5690 15 MLQPCGPPADKPEEN Unmodified 1681.744 0.74399159 4212 Q9BWJ5 SF3B5 Splicing factor 3B subunit 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 42.255 41.224 2 1.3575E-29 46255 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 149.23 147.97 517290000 11288000 179730000 0 8387700 14920000 15720000 19799000 18100000 11823000 22096000 42347000 46780000 32677000 35160000 58466000 35544 4212 32032 297026;297027;297028;297029;297030;297031;297032;297033;297034;297035;297036;297037;297038;297039;297040;297041 235180;235181;235182;235183;235184;235185;235186;235187;235188;235189;235190;235191;235192;235193;235194;235195 235181 16 MLQQVPENINFPAEEEK Acetyl (Protein N-term) 2056.9776 0.97755658 1441 P41252 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 1 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 89.249 89.384 2 3.16E-10 103737 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 87.001 73.597 45724000 0 0 0 0 0 2315100 0 3243200 1484900 5112300 4551600 5440700 1837700 4939500 16799000 35545 1441 32033 297042;297043;297044;297045;297046;297047;297048;297049;297050 235196;235197;235198;235199;235200;235201;235202 235197 7 MLQQVPENINFPAEEEK Oxidation (M) 2030.9619 0.96190652 1441 P41252 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 77.109 72.982 2 3.5534E-36 90875 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 133.05 127.56 47384000 0 47384000 0 0 0 0 0 0 0 0 0 0 0 0 0 35546 1441 32033 297051;297052 235203 235203 2271 1 MLQQVPENINFPAEEEK Unmodified 2014.967 0.9669919 1441 P41252 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS 2.5 0.5 2 2 4 79.979 75.938 2;3 2.1803E-26 94217 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.54 96.239 197950000 0 197950000 0 0 0 0 0 0 0 0 0 0 0 0 0 35547 1441 32033 297053;297054;297055;297056 235204;235205;235206;235207;235208 235205 5 MLQQVPENINFPAEEEK Acetyl (Protein N-term);Oxidation (M) 2072.9725 0.97247121 1441 P41252 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.57 1.92 1 20 1 2 2 2 1 1 2 1 2 2 1 2 2 84.179 84.476 2;3 1.2518E-08 96655 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 99.011 78.904 296400000 16248000 0 0 6910500 19180000 27914000 9144600 6912400 21835000 7870800 39667000 48782000 7371600 33646000 50916000 35548 1441 32033 297057;297058;297059;297060;297061;297062;297063;297064;297065;297066;297067;297068;297069;297070;297071;297072;297073;297074;297075;297076;297077 235209;235210;235211;235212;235213;235214;235215;235216;235217;235218;235219 235218 2271 8 MLQVASQASR Unmodified 1089.5601 0.56007764 3726 Q969T9 WBP2 WW domain-binding protein 2 yes yes 0 0 0 By matching By matching By matching By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 31.564 31.639 2 0.0017794 33254 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.681 27.719 26684000 0 0 0 829470 2061000 0 1496800 3427000 0 0 0 0 3126100 0 15744000 35549 3726 32034 297078;297079;297080;297081;297082;297083 235220 235220 1 MLRDQSAVVVQGLPEGVAFK Oxidation (M) 2159.1409 0.14087394 1977 P78347 GTF2I General transcription factor II-I yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 78.908 78.998 3 2.0566E-08 91112 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 71.073 55.819 321530000 0 0 0 2764800 0 32141000 9676200 22015000 29924000 56815000 35993000 38152000 0 24874000 69179000 35550 1977 32035 297084;297085;297086;297087;297088;297089;297090;297091;297092;297093 235221;235222;235223;235224;235225;235226;235227;235228;235229 235227 3185 9 MLRDQSAVVVQGLPEGVAFK Unmodified 2143.146 0.14595932 1977 P78347 GTF2I General transcription factor II-I yes yes 0 0 1 By MS/MS By matching By matching By MS/MS 8 3.46 1 3 1 1 1 1 81.862 79.915 3 0.0003384 92756 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.982 37.925 45183000 27356000 0 0 0 0 2741700 0 0 0 0 0 0 0 1713400 13373000 35551 1977 32035 297094;297095;297096;297097 235230;235231 235230 2 MLRSGQGDALASGPVETGPMK Unmodified 2101.0296 0.029608929 1454 P42345 MTOR Serine/threonine-protein kinase mTOR yes yes 0 0 1 By MS/MS 2 0 1 1 64.433 56.154 3 0.0027768 75637 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.81 31.44 6302000 6302000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35552 1454 32036 297098 235232 235232 1 MLSAGVTEAVLK Unmodified 1217.669 0.66895938 1685 P52306 RAP1GDS1 Rap1 GTPase-GDP dissociation stimulator 1 yes yes 0 0 0 By MS/MS By MS/MS By matching 2 0 3 1 1 1 76.618 71.346 2 0.019749 92143 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.096 42.286 243950000 12205000 223120000 8627000 0 0 0 0 0 0 0 0 0 0 0 0 35553 1685 32037 297099;297100;297101 235233;235234 235234 2 MLSAGVTEAVLK Oxidation (M) 1233.6639 0.663874 1685 P52306 RAP1GDS1 Rap1 GTPase-GDP dissociation stimulator 1 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 68.749 63.951 2 0.0022869 81366 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.472 63.219 59108000 0 52294000 6813700 0 0 0 0 0 0 0 0 0 0 0 0 35554 1685 32037 297102;297103 235235 235235 2730 0 MLSCAGADR Unmodified 979.42154 0.42153524 1220 P27635;Q96L21 RPL10;RPL10L 60S ribosomal protein L10;60S ribosomal protein L10-like yes no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 17.579 17.835 2 0.0091747 17448 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 67.494 36.19 38309000 0 0 0 0 4228900 2231000 0 0 0 4354900 5419200 15163000 0 0 6912700 35555 1220 32038 297104;297105;297106;297107;297108;297109 235236;235237;235238;235239 235239 4 MLSCAGADR Oxidation (M) 995.41645 0.41644987 1220 P27635;Q96L21 RPL10;RPL10L 60S ribosomal protein L10;60S ribosomal protein L10-like yes no 0 1 0 By MS/MS 10 0 1 1 9.2336 9.6393 2 0.028264 7837 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 43.808 15.296 1393000 0 0 0 0 0 0 0 0 0 0 1393000 0 0 0 0 35556 1220 32038 297110 235240 235240 1 MLSEVLLVSAPGK Acetyl (Protein N-term) 1384.7636 0.76358805 2096 Q03426 MVK Mevalonate kinase yes yes 1 0 0 By MS/MS 2 0 1 1 100.29 95.572 2 0.00023793 118153 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.937 77.271 20514000 0 20514000 0 0 0 0 0 0 0 0 0 0 0 0 0 35557 2096 32039 297111 235241 235241 1 MLSEVLLVSAPGK Oxidation (M) 1358.7479 0.74793799 2096 Q03426 MVK Mevalonate kinase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.67 0.471 1 2 1 1 1 79.713 76.491 2 0.0018301 92926 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 83 58.224 11377000 951020 2524900 7900600 0 0 0 0 0 0 0 0 0 0 0 0 35558 2096 32039 297112;297113;297114 235242;235243 235243 3393 2 MLSEVLLVSAPGK Unmodified 1342.753 0.75302336 2096 Q03426 MVK Mevalonate kinase yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 85.385 80.099 2 6.2099E-21 102660 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 139.86 111.46 58249000 54134000 0 4115000 0 0 0 0 0 0 0 0 0 0 0 0 35559 2096 32039 297115;297116 235244;235245 235244 2 MLSGIGAEGEAR Unmodified 1189.5761 0.57612163 2235 Q13112 CHAF1B Chromatin assembly factor 1 subunit B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 42.162 42.342 2 7.7311E-05 46122 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.171 64.248 56863000 0 0 0 3234300 3114400 4480700 2542000 4093900 0 5090100 7393100 7382600 6622400 4596900 8313100 35560 2235 32040 297117;297118;297119;297120;297121;297122;297123;297124;297125;297126;297127 235246;235247;235248;235249;235250;235251;235252;235253;235254;235255;235256 235249 11 MLSLQYPDVYRDETAVQDYHGHK Acetyl (Protein N-term);Oxidation (M) 2822.297 0.29699324 1533 P48147 PREP Prolyl endopeptidase yes yes 1 1 1 By MS/MS 3 0 1 1 80.499 77.168 4 0.00022003 92532 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 48.824 47.292 9919700 0 9919700 0 0 0 0 0 0 0 0 0 0 0 0 0 35561 1533 32041 297128 235257 235257 2434 1 MLSQDAPTVK Unmodified 1088.5536 0.55359527 448 O60934 NBN Nibrin yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 34.008 34.197 2 0.0023993 36513 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 83.998 58.059 98166000 0 0 0 0 6014700 7703800 7396900 8042900 5239600 12275000 14432000 0 12230000 11304000 13527000 35562 448 32042 297129;297130;297131;297132;297133;297134;297135;297136;297137;297138 235258;235259;235260;235261;235262;235263;235264;235265;235266 235263 9 MLSSAYISDHMK 2 Oxidation (M) 1413.6268 0.62683657 1781 P56270 MAZ Myc-associated zinc finger protein yes yes 0 2 0 By MS/MS By MS/MS 2 0 2 1 1 39.572 34.487 2;3 0.0093035 43772 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 44.922 37.011 12455000 3294000 0 9161000 0 0 0 0 0 0 0 0 0 0 0 0 35563 1781 32043 297139;297140 235267;235268;235269 235268 2907;2908 3 MLSSAYISDHMK Oxidation (M) 1397.6319 0.63192195 1781 P56270 MAZ Myc-associated zinc finger protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 6 3 1 2 50.852 44.634 2;3 0.0030118 57992 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.706 51.544 146010000 110400000 20529000 15079000 0 0 0 0 0 0 0 0 0 0 0 0 35564 1781 32043 297141;297142;297143;297144;297145;297146 235270;235271;235272;235273 235270 2907;2908 2 MLSSAYISDHMK Unmodified 1381.637 0.63700733 1781 P56270 MAZ Myc-associated zinc finger protein yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 64.504 57.718 2;3 3.0003E-05 77776 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.52 87.124 94182000 87288000 0 6893600 0 0 0 0 0 0 0 0 0 0 0 0 35565 1781 32043 297147;297148;297149 235274;235275;235276;235277 235276 4 MLSSTPPTPIACAPSAVNQAAPHQQNR Oxidation (M) 2859.3756 0.37559469 488 O75376 NCOR1 Nuclear receptor corepressor 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 64.319 64.48 3 3.1755E-60 73849 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 105.51 99.002 83582000 0 0 0 0 5755400 8889500 8817800 6144600 5244800 7229300 11169000 8550500 7299800 6189000 8292000 35566 488 32044 297150;297151;297152;297153;297154;297155;297156;297157;297158;297159;297160 235278;235279;235280;235281;235282;235283;235284;235285;235286;235287;235288;235289;235290;235291;235292 235291 634 15 MLSSTPPTPIACAPSAVNQAAPHQQNR Unmodified 2843.3807 0.38068007 488 O75376 NCOR1 Nuclear receptor corepressor 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 68.083 68.313 3 2.0985E-31 77788 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.947 49.586 29461000 0 0 0 0 0 0 0 3707100 4386700 5723300 0 0 0 5403200 10241000 35567 488 32044 297161;297162;297163;297164;297165 235293;235294;235295;235296 235294 4 MLTAQDMSYDEAR Unmodified 1529.649 0.64902858 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 54.444 54.594 2 1.9541E-11 61782 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 141.95 134.31 42107000 0 0 0 0 2349600 3642900 2526500 3222200 0 5470400 6841500 0 0 4255400 13798000 35568 2047 32045 297166;297167;297168;297169;297170;297171;297172;297173 235297;235298;235299;235300;235301;235302 235298 6 MLTAQDMSYDEAR Oxidation (M) 1545.6439 0.6439432 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 46.744 46.993 2 0.021153 52880 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 48.981 46.003 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35569 2047 32045 297174;297175 235303;235304 235304 3327;3328 2 MLTAQDMSYDEARNLHSK Unmodified 2108.9619 0.96192329 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 61.021 55.039 4 2.4912E-10 73789 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.754 88.65 113250000 59295000 38798000 15158000 0 0 0 0 0 0 0 0 0 0 0 0 35570 2047 32046 297176;297177;297178 235305;235306;235307;235308;235309;235310 235306 6 MLTAQDMSYDEARNLHSK Oxidation (M) 2124.9568 0.95683792 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 1 1 By MS/MS 2 0 3 3 50.847 42.989 3;4 1.6022E-05 65809 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.168 59.127 53205000 53205000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35571 2047 32046 297179;297180;297181 235311;235312;235313 235311 3327;3328 1 MLTAQDMSYDEARNLHSK 2 Oxidation (M) 2140.9518 0.95175254 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 2 1 By MS/MS 2 0 2 2 39.109 35.56 3;4 1.3573E-08 44806 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 96.773 92.421 31197000 0 0 31197000 0 0 0 0 0 0 0 0 0 0 0 0 35572 2047 32046 297182;297183 235314;235315 235314 3327;3328 0 MLTDSGGGGTSFEEDLDSVAPR Acetyl (Protein N-term);Oxidation (M) 2297.9958 0.99578542 3250 Q8IWZ3 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 yes yes 1 1 0 By MS/MS By MS/MS By matching 10 0 4 1 2 1 86.357 86.504 2;3 2.3504E-34 100313 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 101.36 96.508 6813300 0 0 0 0 0 0 0 0 0 3010600 1684300 2118400 0 0 0 35573 3250 32047 297184;297185;297186;297187 235316;235317 235316 4860 2 MLTEAIMHDCVVK Oxidation (M) 1561.7303 0.73025579 2102;329 Q04637;O43432 EIF4G1;EIF4G3 Eukaryotic translation initiation factor 4 gamma 1;Eukaryotic translation initiation factor 4 gamma 3 no no 0 1 0 By MS/MS By MS/MS 2 0 5 3 2 64.641 58.154 3 0.00056441 74990 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 78.324 53.471 64148000 43700000 0 20448000 0 0 0 0 0 0 0 0 0 0 0 0 35574 2102;329 32048 297188;297189;297190;297191;297192 235318;235319;235320;235321;235322 235321 420;421 4 MLTEAIMHDCVVK Unmodified 1545.7353 0.73534116 2102;329 Q04637;O43432 EIF4G1;EIF4G3 Eukaryotic translation initiation factor 4 gamma 1;Eukaryotic translation initiation factor 4 gamma 3 no no 0 0 0 By MS/MS 2 0 1 1 76.458 68.327 3 0.006718 90123 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.46 36.014 103140000 103140000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35575 2102;329 32048 297193 235323 235323 1 MLTELEK Oxidation (M) 878.44192 0.44191956 797 P05109 S100A8 Protein S100-A8;Protein S100-A8, N-terminally processed yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 13 2 1 1 1 1 1 1 1 1 1 1 1 27.038 27.193 2 0.01262 29095 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 110.63 50.339 1479000000 0 0 0 766820000 51752000 64893000 58244000 81188000 38344000 78703000 90920000 72235000 97574000 47099000 31254000 35576 797 32049 297194;297195;297196;297197;297198;297199;297200;297201;297202;297203;297204;297205;297206 235324;235325;235326;235327;235328;235329;235330;235331;235332;235333;235334;235335;235336 235336 963 13 MLTELEK Unmodified 862.447 0.44700494 797 P05109 S100A8 Protein S100-A8;Protein S100-A8, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 38.759 38.496 2 0.01917 42655 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 110.61 53.148 2909300000 0 125850000 0 1786200000 82228000 84754000 75958000 0 56936000 138500000 294180000 91146000 56137000 69453000 48023000 35577 797 32049 297207;297208;297209;297210;297211;297212;297213;297214;297215;297216;297217;297218 235337;235338;235339;235340;235341;235342;235343;235344;235345;235346;235347;235348;235349 235345 13 MLTFNPHK Unmodified 986.50077 0.50077184 1236 P28482 MAPK1 Mitogen-activated protein kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 40.613 39.81 2 0.0028276 57556 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 119.89 92.925 164810000 66061000 6521600 0 4070200 4080700 10008000 6807600 5418600 4748400 9745100 11375000 8188800 6997300 4606900 16183000 35578 1236 32050 297219;297220;297221;297222;297223;297224;297225;297226;297227;297228;297229;297230;297231;297232;297233 235350;235351;235352;235353;235354;235355;235356;235357;235358;235359 235354 10 MLTFNPHK Oxidation (M) 1002.4957 0.49568646 1236 P28482 MAPK1 Mitogen-activated protein kinase 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 36.59 31.672 2 0.014405 39857 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 91.906 63.394 169330000 123980000 30095000 15253000 0 0 0 0 0 0 0 0 0 0 0 0 35579 1236 32050 297234;297235;297236 235360;235361;235362 235361 1831 3 MLTFNPNK Unmodified 963.48479 0.48478743 1215 P27361 MAPK3 Mitogen-activated protein kinase 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 48.73 48.892 2 0.044749 54962 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 48.787 28.088 118870000 0 0 0 6015500 5193300 11129000 0 7132700 8357800 12925000 17705000 21142000 8867500 0 20404000 35580 1215 32051 297237;297238;297239;297240;297241;297242;297243;297244;297245;297246 235363 235363 1 MLTGPVYSQSTALTHK Oxidation (M) 1748.8767 0.87672033 3170 Q86VP6 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 50.196 50.598 3 3.3679E-15 56206 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.421 90.641 126490000 0 0 0 0 0 37968000 0 0 0 0 35619000 0 0 0 52901000 35581 3170 32052 297247;297248;297249;297250 235364;235365;235366;235367;235368;235369;235370 235368 4790 7 MLTGPVYSQSTALTHK Unmodified 1732.8818 0.8818057 3170 Q86VP6 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 2 57.359 57.663 2;3 1.817E-21 65715 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 99.451 86.959 180490000 0 0 0 0 0 27488000 0 9935400 0 23279000 28567000 9481800 0 23840000 57904000 35582 3170 32052 297251;297252;297253;297254;297255;297256;297257;297258 235371;235372;235373;235374;235375;235376 235372 6 MLTINPAK Unmodified 886.49462 0.49462383 2316 Q13557 CAMK2D Calcium/calmodulin-dependent protein kinase type II subunit delta yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 51.29 44.429 2 0.037509 57839 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.715 20.749 85653000 36194000 49459000 0 0 0 0 0 0 0 0 0 0 0 0 0 35583 2316 32053 297259;297260 235377 235377 1 MLTNHTFIK Unmodified 1103.5798 0.57975044 1373 P36507 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 44.813 43.498 2 0.0088073 63691 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 108.81 69.145 49250000 25230000 0 0 0 3220700 6959700 4391800 0 0 0 0 0 4993500 4454000 0 35584 1373 32054 297261;297262;297263;297264;297265;297266 235378;235379;235380 235378 2 MLTSMLSGSK Unmodified 1053.5199 0.5198523 3572 Q8WWH5 TRUB1 Probable tRNA pseudouridine synthase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 63.05 55.973 2 0.0014764 71663 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.76 98.52 61412000 25234000 36178000 0 0 0 0 0 0 0 0 0 0 0 0 0 35585 3572 32055 297267;297268;297269 235381;235382;235383;235384 235382 4 MLVAAAAERNK Acetyl (Protein N-term);Oxidation (M) 1230.6391 0.63905624 3980 Q96S19 C16orf13 UPF0585 protein C16orf13 yes yes 1 1 1 By MS/MS By MS/MS 2 0 2 1 1 54.796 47.827 2 7.9401E-05 65254 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 105.78 92.205 13949000 6972600 6976600 0 0 0 0 0 0 0 0 0 0 0 0 0 35586 3980 32056 297270;297271 235385 235385 5465 1 MLVAAAAERNK Acetyl (Protein N-term) 1214.6441 0.64414162 3980 Q96S19 C16orf13 UPF0585 protein C16orf13 yes yes 1 0 1 By MS/MS 2 0 1 1 75.499 67.368 2 0.00081277 88971 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 106.88 88.972 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35587 3980 32056 297272 235386 235386 1 MLVDDIGDVTITNDGATILK Oxidation (M) 2119.0719 0.071850899 1067 P17987 TCP1 T-complex protein 1 subunit alpha yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.83 3.67 9 3 6 2 7 3 1 1 1 1 1 1 88.742 85.952 2;3 1.9739E-109 100626 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 180.97 167.99 2851700000 99168000 2661200000 47208000 0 0 0 0 0 0 11153000 9060800 8410600 0 3620700 11840000 35588 1067 32057 297273;297274;297275;297276;297277;297278;297279;297280;297281;297282;297283;297284;297285;297286;297287;297288;297289;297290 235387;235388;235389;235390;235391;235392;235393;235394;235395;235396;235397;235398;235399;235400;235401;235402;235403;235404;235405;235406;235407;235408 235389 1515 22 MLVDDIGDVTITNDGATILK Unmodified 2103.0769 0.076936277 1067 P17987 TCP1 T-complex protein 1 subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.11 0.314 16 2 4 10 4 91.929 87.038 2;3 1.7113E-104 111745 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 230.26 212.19 2246500000 221450000 1965500000 59569000 0 0 0 0 0 0 0 0 0 0 0 0 35589 1067 32057 297291;297292;297293;297294;297295;297296;297297;297298;297299;297300;297301;297302;297303;297304;297305;297306;297307;297308 235409;235410;235411;235412;235413;235414;235415;235416;235417;235418;235419;235420;235421;235422;235423;235424;235425;235426;235427;235428;235429 235417 17 MLVDLAK Oxidation (M) 804.44153 0.44152563 829 P06744 GPI Glucose-6-phosphate isomerase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.09 3.85 4 7 1 2 1 1 1 1 1 2 1 44.149 42.351 1;2 0.015834 46026 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.614 18.838 616320000 16079000 221420000 25970000 0 0 0 0 0 4820600 0 79187000 55311000 9013200 48652000 155870000 35590 829 32058 297309;297310;297311;297312;297313;297314;297315;297316;297317;297318;297319 235430;235431;235432;235433;235434;235435;235436 235432 1005 6 MLVDVFAPEFR Oxidation (M) 1338.6642 0.66420836 2652 Q2M389 KIAA1033 WASH complex subunit 7 yes yes 0 1 0 By MS/MS 10 0 1 1 86.244 86.289 2 0.00021974 99912 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 96.331 74.245 4474900 0 0 0 0 0 4474900 0 0 0 0 0 0 0 0 0 35591 2652 32059 297320 235437 235437 4317 1 MLVELSK Unmodified 818.45718 0.45717569 1642 P50991 CCT4 T-complex protein 1 subunit delta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 50.83 49.96 2 0.023725 56423 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 94.006 0 2571800000 0 1179500000 59428000 0 81422000 125250000 107500000 116960000 74427000 180330000 0 0 0 193400000 453650000 35592 1642 32060 297321;297322;297323;297324;297325;297326;297327;297328;297329;297330 235438;235439;235440;235441;235442;235443;235444;235445;235446;235447;235448;235449;235450 235446 13 MLVELSK Oxidation (M) 834.45209 0.45209032 1642 P50991 CCT4 T-complex protein 1 subunit delta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 37.192 37.341 2 0.015711 41188 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 100.74 13.16 793300000 0 0 0 70680000 67405000 0 0 66264000 62358000 110590000 96019000 143990000 94591000 81409000 0 35593 1642 32060 297331;297332;297333;297334;297335;297336;297337;297338;297339 235451;235452;235453;235454;235455;235456;235457;235458;235459 235454 2645 9 MLVEYTQNQK Unmodified 1252.6122 0.61217279 4569 Q9NQG5 RPRD1B Regulation of nuclear pre-mRNA domain-containing protein 1B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.042 40.222 2 6.4228E-32 44660 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 180.93 141.28 381760000 0 0 0 19428000 16648000 23779000 24507000 27412000 18568000 36187000 45431000 56605000 33292000 25458000 54441000 35594 4569 32061 297340;297341;297342;297343;297344;297345;297346;297347;297348;297349;297350;297351 235460;235461;235462;235463;235464;235465;235466;235467;235468;235469;235470 235463 10 MLVEYTQNQK Oxidation (M) 1268.6071 0.60708741 4569 Q9NQG5 RPRD1B Regulation of nuclear pre-mRNA domain-containing protein 1B yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 29.296 29.578 2 2.1417E-05 32248 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 155.1 131.67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35595 4569 32061 297352;297353;297354;297355;297356;297357;297358;297359;297360 235471;235472;235473;235474;235475;235476;235477;235478;235479 235472 5977 9 MLVIEQCK Unmodified 1019.5144 0.514373 1548 P48643 CCT5 T-complex protein 1 subunit epsilon yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 44.591 44.452 2 0.0045396 50004 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 132.29 85.934 652250000 0 0 17718000 0 0 73246000 58565000 35330000 31154000 0 89050000 86022000 0 83848000 177320000 35596 1548 32062 297361;297362;297363;297364;297365;297366;297367;297368;297369;297370;297371;297372 235480;235481;235482;235483;235484;235485;235486;235487;235488;235489;235490;235491;235492;235493 235485 14 MLVIEQCK Oxidation (M) 1035.5093 0.50928762 1548 P48643 CCT5 T-complex protein 1 subunit epsilon yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.42 3.66 3 1 8 1 2 1 1 1 1 1 1 1 1 1 36.94 33.168 2 0.0034083 35838 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 134.66 95.857 310500000 14707000 254830000 6882600 0 0 0 0 0 0 0 0 0 0 0 34078000 35597 1548 32062 297373;297374;297375;297376;297377;297378;297379;297380;297381;297382;297383;297384 235494;235495;235496;235497;235498;235499;235500;235501;235502;235503;235504;235505 235498 2466 12 MLVIPPGLSEEEEALQK Oxidation (M) 1897.9707 0.97068029 1075 P18615 NELFE Negative elongation factor E yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 3.6 3.2 4 1 2 2 1 88.127 84.474 2;3 1.0276E-12 104789 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.39 90.019 91853000 0 88854000 2999100 0 0 0 0 0 0 0 0 0 0 0 0 35598 1075 32063 297385;297386;297387;297388;297389 235506;235507;235508 235506 1546 3 MLVIPPGLSEEEEALQK Unmodified 1881.9758 0.97576567 1075 P18615 NELFE Negative elongation factor E yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 3.6 3.2 4 1 2 2 1 90.64 87.722 2;3 0.0001373 108820 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.407 83.205 198750000 0 193070000 1633400 0 0 0 0 0 0 0 0 0 0 0 4043200 35599 1075 32063 297390;297391;297392;297393;297394 235509;235510;235511 235509 2 MLVLDEADEMLNK 2 Oxidation (M) 1551.716 0.71604551 1400 P38919 EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 6 2 24 2 4 2 2 2 2 2 2 2 2 2 2 2 2 2 65.333 63.989 2 1.8328E-13 73301 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 135.55 109.61 980860000 23535000 340410000 10415000 33556000 32106000 61059000 59359000 38144000 44057000 70872000 68391000 83473000 40426000 35862000 39189000 35600 1400 32064 297395;297396;297397;297398;297399;297400;297401;297402;297403;297404;297405;297406;297407;297408;297409;297410;297411;297412;297413;297414;297415;297416;297417;297418;297419;297420;297421;297422;297423;297424;297425;297426 235512;235513;235514;235515;235516;235517;235518;235519;235520;235521;235522;235523;235524;235525;235526;235527;235528;235529;235530;235531;235532;235533;235534;235535;235536;235537;235538;235539;235540;235541;235542;235543 235530 2178;2179 28 MLVLDEADEMLNK Oxidation (M) 1535.7211 0.72113089 1400 P38919 EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.69 2.88 3 2 24 1 3 1 1 2 3 2 2 2 2 2 2 2 2 2 77.369 76.671 2 5.6388E-10 98834 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 116.23 100.01 902470000 32231000 494810000 9745400 4016100 16018000 45328000 26549000 26865000 26212000 44069000 41227000 34362000 23862000 30661000 46518000 35601 1400 32064 297427;297428;297429;297430;297431;297432;297433;297434;297435;297436;297437;297438;297439;297440;297441;297442;297443;297444;297445;297446;297447;297448;297449;297450;297451;297452;297453;297454;297455 235544;235545;235546;235547;235548;235549;235550;235551;235552;235553;235554;235555;235556;235557;235558;235559;235560;235561;235562;235563;235564;235565;235566;235567;235568;235569;235570;235571;235572;235573;235574;235575;235576 235563 2178;2179 30 MLVLDEADEMLNK Unmodified 1519.7262 0.72621627 1400 P38919 EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 86.206 84.974 2 2.5293E-33 105592 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 171.85 145.26 1020000000 85430000 846370000 14318000 0 0 5875900 2609600 7655700 3300100 8577300 7179600 6233700 2749200 4120100 25605000 35602 1400 32064 297456;297457;297458;297459;297460;297461;297462;297463;297464;297465;297466;297467;297468;297469 235577;235578;235579;235580;235581;235582;235583;235584;235585;235586;235587;235588;235589;235590 235580 9 MLVLDSDK Unmodified 919.46847 0.46846866 2611 Q16539 MAPK14 Mitogen-activated protein kinase 14 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 44.953 45.356 2 0.032702 51458 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 54.157 22.202 8977400 0 0 0 0 0 2855700 0 0 0 0 0 6121700 0 0 0 35603 2611 32065 297470;297471 235591;235592 235591 2 MLVSGAGDIK Oxidation (M) 1005.5165 0.51648149 1410 P40227;Q92526 CCT6A;CCT6B T-complex protein 1 subunit zeta;T-complex protein 1 subunit zeta-2 yes no 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5 3.74 14 4 10 2 14 2 1 1 1 1 1 1 1 1 1 1 38.037 35.516 2 0.0018287 38104 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 80.219 41.4 3876700000 94688000 3056300000 4182900 1515500 44946000 74035000 72350000 0 44083000 86764000 0 106720000 117110000 77885000 96191000 35604 1410 32066 297472;297473;297474;297475;297476;297477;297478;297479;297480;297481;297482;297483;297484;297485;297486;297487;297488;297489;297490;297491;297492;297493;297494;297495;297496;297497;297498;297499 235593;235594;235595;235596;235597;235598;235599;235600;235601;235602;235603;235604;235605;235606;235607;235608;235609;235610;235611;235612;235613;235614;235615;235616;235617;235618;235619;235620 235620 2216 27 MLVSGAGDIK Unmodified 989.52157 0.52156686 1410 P40227;Q92526 CCT6A;CCT6B T-complex protein 1 subunit zeta;T-complex protein 1 subunit zeta-2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.05 3.38 4 1 15 1 3 1 1 1 1 1 1 2 1 2 2 1 1 1 45.76 44.392 1;2 5.3921E-05 57336 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 161.27 79.633 4920600000 123980000 4240800000 45669000 0 28991000 41127000 25793000 33629000 33353000 45513000 46400000 52397000 30610000 55674000 116660000 35605 1410 32066 297500;297501;297502;297503;297504;297505;297506;297507;297508;297509;297510;297511;297512;297513;297514;297515;297516;297517;297518;297519 235621;235622;235623;235624;235625;235626;235627;235628;235629;235630;235631;235632;235633;235634;235635;235636;235637;235638;235639;235640;235641;235642;235643;235644;235645;235646;235647;235648;235649;235650;235651 235631 29 MLVTFDEELRPLPVSVR Oxidation (M) 2016.0714 0.071397389 2252 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 0 1 1 By MS/MS By MS/MS 10 0 2 1 1 84.774 84.925 3 3.4463E-05 98399 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 73.707 58.072 14320000 0 0 0 0 0 0 0 0 0 6583800 7736400 0 0 0 0 35606 2252 32067 297520;297521 235652;235653;235654 235653 3669 3 MLVVEVANGR Oxidation (M) 1102.5805 0.58047873 4133 Q9BSV6 TSEN34 tRNA-splicing endonuclease subunit Sen34 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 6 1 1 1 1 1 1 46.787 46.754 2 0.0054095 52484 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 60.59 41.807 14310000 0 0 0 1871700 3115000 0 3994500 0 1679300 0 0 0 0 0 3649200 35607 4133 32068 297522;297523;297524;297525;297526;297527 235655;235656;235657;235658;235659 235655 5616 5 MLVVGGIDR Unmodified 958.52699 0.52698659 2485 Q15046 KARS Lysine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 58.911 59.116 2 0.0069711 66399 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.665 54.177 80047000 0 0 0 0 5245000 0 5005300 0 4828600 7673800 16314000 12087000 0 0 28893000 35608 2485 32069 297528;297529;297530;297531;297532;297533;297534 235660;235661;235662;235663 235660 4 MLWGSDPYPHAEPQQATTPK Oxidation (M) 2269.0474 0.047367483 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 2 2 2 1 2 2 2 1 2 2 1 61.053 61.148 3 1.0769E-12 70033 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 84.493 79.389 208640000 0 0 0 5503800 16981000 17025000 21094000 8377200 16780000 18174000 31411000 12531000 25665000 21495000 13605000 35609 5216 32070 297535;297536;297537;297538;297539;297540;297541;297542;297543;297544;297545;297546;297547;297548;297549;297550;297551;297552;297553;297554 235664;235665;235666;235667;235668;235669;235670;235671;235672;235673;235674;235675;235676;235677;235678;235679;235680;235681;235682;235683 235673 6622 20 MLWGSDPYPHAEPQQATTPK Unmodified 2253.0525 0.052452861 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 67.771 68.036 3 4.763E-07 77892 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 49.528 46.337 110530000 0 0 0 0 0 0 0 12130000 0 19857000 14994000 15035000 13193000 13666000 21653000 35610 5216 32070 297555;297556;297557;297558;297559;297560;297561;297562 235684;235685;235686;235687;235688;235689;235690;235691;235692;235693;235694 235690 11 MLYAATRATLK Unmodified 1237.6853 0.68527815 2190 Q12792 TWF1 Twinfilin-1 yes yes 0 0 1 By MS/MS 2 0 1 1 54.544 46.435 3 0.041443 63725 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.154 20.392 5940500 5940500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35611 2190 32071 297563 235695 235695 1 MLYAATRATLK Oxidation (M) 1253.6802 0.68019277 2190 Q12792 TWF1 Twinfilin-1 yes yes 0 1 1 By MS/MS 2 0 1 1 44.877 38.012 2 0.037637 52187 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.647 51.292 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35612 2190 32071 297564 235696 235696 1 MLYDMENPPADEYFGR 2 Oxidation (M) 1978.8077 0.80771406 3706 Q93052 LPP Lipoma-preferred partner yes yes 0 2 0 By matching By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 2 1 2 69.978 70.197 2 2.556E-19 79854 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.66 106.9 16868000 0 0 0 0 0 0 2095900 1982100 0 4285100 0 0 0 3021700 5483200 35613 3706 32072 297565;297566;297567;297568;297569;297570;297571 235697;235698;235699 235698 5286;5287 3 MLYEEDLQNLCDK Unmodified 1669.7328 0.73275821 4399 Q9H4I2 ZHX3 Zinc fingers and homeoboxes protein 3 yes yes 0 0 0 By MS/MS 2 0 1 1 78.069 73.294 2 0.046368 91442 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.786 59.734 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35614 4399 32073 297572 235700 235700 1 MLYLIGLGLGDAK Oxidation (M) 1378.753 0.75302336 4372 Q9H2P9 DPH5 Diphthine synthase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching 6 4 2 2 1 1 1 1 91.495 88.889 2 0.00074317 103616 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 64.73 49.397 10817000 4342000 0 1063500 0 0 1508300 0 0 0 0 0 0 0 0 3902700 35615 4372 32074 297573;297574;297575;297576 235701;235702;235703 235701 5829 3 MLYVPVMPGHAK Unmodified 1341.6937 0.69373435 3 A0AVT1 UBA6 Ubiquitin-like modifier-activating enzyme 6 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS 8.4 3.2 1 4 1 1 1 1 1 72.091 70.611 3 0.010963 93834 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 33.761 24.073 47791000 33256000 0 0 0 0 2423300 0 1299900 0 1384900 0 0 0 0 9426000 35616 3 32075 297577;297578;297579;297580;297581 235704;235705 235705 2 MLYVPVMPGHAK Oxidation (M) 1357.6886 0.68864897 3 A0AVT1 UBA6 Ubiquitin-like modifier-activating enzyme 6 yes yes 0 1 0 By MS/MS 2 0 1 1 74.296 66.165 3 0.010388 87451 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.653 40.655 39399000 39399000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35617 3 32075 297582 235706 235706 6 1 MMAAALGPPEVIAQLENAAK Acetyl (Protein N-term);Oxidation (M) 2082.0489 0.048947388 4290 Q9C0E2 XPO4 Exportin-4 yes yes 1 1 0 By MS/MS 2 0 1 1 101.06 96.348 3 0.00022885 119233 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 47.082 43.372 10496000 0 10496000 0 0 0 0 0 0 0 0 0 0 0 0 0 35618 4290 32076 297583 235707 235707 5758;5759 1 MMAAALGPPEVIAQLENAAK Acetyl (Protein N-term) 2066.054 0.054032766 4290 Q9C0E2 XPO4 Exportin-4 yes yes 1 0 0 By MS/MS 2 0 2 2 103.41 98.678 2;3 5.0623E-11 121853 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.011 81.092 17592000 0 17592000 0 0 0 0 0 0 0 0 0 0 0 0 0 35619 4290 32076 297584;297585 235708;235709;235710 235709 3 MMADEALGSGLVSR Unmodified 1435.6799 0.67993477 2223 Q13011 ECH1 Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial yes yes 0 0 0 By MS/MS 10 0 1 1 69.921 70.387 2 0.036804 80297 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.967 41.391 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35620 2223 32077 297586 235711 235711 1 MMANGILK 2 Oxidation (M) 908.44596 0.44595908 1164 P23526 AHCY Adenosylhomocysteinase yes yes 0 2 0 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 28.084 23.65 2 0.016503 31452 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.21 71.37 197510000 49910000 117700000 29905000 0 0 0 0 0 0 0 0 0 0 0 0 35621 1164 32078 297587;297588;297589;297590;297591 235712;235713;235714;235715;235716 235712 1682;1683 1 MMANGILK Unmodified 876.45613 0.45612984 1164 P23526 AHCY Adenosylhomocysteinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 49.943 48.407 2 0.020013 53667 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 63.148 41.445 1375700000 650020000 656060000 0 4303200 0 0 0 0 0 3088900 11728000 7505100 0 8998600 33992000 35622 1164 32078 297592;297593;297594;297595;297596;297597;297598;297599 235717;235718;235719 235719 3 MMANGILK Oxidation (M) 892.45104 0.45104446 1164 P23526 AHCY Adenosylhomocysteinase yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 41.871 36.669 2 0.010856 50610 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 99.384 70.855 261210000 217470000 0 43740000 0 0 0 0 0 0 0 0 0 0 0 0 35623 1164 32078 297600;297601 235720;235721 235720 1682;1683 2 MMASGLTER 2 Oxidation (M) 1026.4474 0.44741564 4879 Q9UG63 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 13.978 14.188 2 0.0071013 13345 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.854 33.124 131940000 0 0 0 0 11148000 11683000 0 7642900 9677600 15350000 17191000 15122000 16179000 13591000 14353000 35624 4879 32079 297602;297603;297604;297605;297606;297607;297608;297609;297610;297611 235722;235723;235724;235725;235726;235727;235728;235729;235730;235731 235722 6231;6232 9 MMASGLTER Unmodified 994.45759 0.4575864 4879 Q9UG63 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 34.083 34.157 2 0.0030491 37916 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 91.783 51.514 253030000 0 0 0 17504000 20694000 25091000 20727000 24917000 15058000 30192000 40748000 0 30762000 27336000 0 35625 4879 32079 297612;297613;297614;297615;297616;297617;297618;297619;297620;297621 235732;235733;235734;235735;235736;235737 235737 6 MMASGLTER Oxidation (M) 1010.4525 0.45250102 4879 Q9UG63 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 22 3 2 2 2 1 2 2 2 2 1 2 1 23.769 23.929 2 0.0089417 25917 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 59.597 27.662 214890000 0 0 0 26771000 12520000 16235000 19859000 6710700 13329000 21034000 25755000 27722000 13528000 18828000 12600000 35626 4879 32079 297622;297623;297624;297625;297626;297627;297628;297629;297630;297631;297632;297633;297634;297635;297636;297637;297638;297639;297640;297641;297642;297643 235738;235739;235740;235741;235742;235743;235744 235739 6231;6232 5 MMASGLTERVVSDK Oxidation (M) 1538.7433 0.74326331 4879 Q9UG63 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 0 1 1 By MS/MS By MS/MS 2 0 5 3 2 52.369 45.367 3 0.0022813 61382 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.901 48.409 140190000 137150000 0 3037000 0 0 0 0 0 0 0 0 0 0 0 0 35627 4879 32080 297644;297645;297646;297647;297648 235745;235746;235747;235748 235745 6231;6232 3 MMASGLTERVVSDK Unmodified 1522.7483 0.74834869 4879 Q9UG63 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 0 0 1 By MS/MS 2 0 1 1 63.177 54.909 3 0.00054572 73904 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.966 40.405 134820000 134820000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35628 4879 32080 297649 235749;235750 235750 2 MMCGAPSATQPATAETQHIADQVR Acetyl (Protein N-term);2 Oxidation (M) 2644.168 0.16796968 772 P04080 CSTB Cystatin-B yes yes 1 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 64.89 64.471 3 1.2541E-77 73987 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 135.54 133.46 472280000 0 29617000 0 18604000 20373000 20285000 27384000 15860000 0 23845000 69909000 84134000 21284000 47065000 93919000 35629 772 32081 297650;297651;297652;297653;297654;297655;297656;297657;297658;297659;297660;297661 235751;235752;235753;235754;235755;235756;235757;235758;235759;235760;235761;235762;235763;235764;235765 235762 925;926 15 MMCGAPSATQPATAETQHIADQVR Acetyl (Protein N-term);Oxidation (M) 2628.1731 0.17305506 772 P04080 CSTB Cystatin-B yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 2 2 1 2 1 71.176 70.925 3 1.4858E-24 86924 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.67 100.75 223680000 0 46094000 0 0 0 0 3978100 0 0 8246800 33490000 35915000 2913600 28844000 64200000 35630 772 32081 297662;297663;297664;297665;297666;297667;297668;297669;297670;297671;297672 235766;235767;235768;235769;235770;235771;235772;235773;235774 235768 925;926 6 MMCGAPSATQPATAETQHIADQVR Acetyl (Protein N-term) 2612.1781 0.17814043 772 P04080 CSTB Cystatin-B yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 77.144 76.115 3 6.9006E-104 92793 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.17 137.29 233000000 0 135540000 0 0 0 0 0 0 0 0 15467000 0 0 10277000 71714000 35631 772 32081 297673;297674;297675;297676 235775;235776;235777 235775 3 MMCGAPSATQPATAETQHIADQVRSQLEEK Acetyl (Protein N-term);2 Oxidation (M) 3358.5228 0.52278879 772 P04080 CSTB Cystatin-B yes yes 1 2 1 By MS/MS By MS/MS 2 0 2 1 1 85.965 79.513 3 1.9309E-118 101534 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 142.94 142.2 143450000 28685000 114770000 0 0 0 0 0 0 0 0 0 0 0 0 0 35632 772 32082 297677;297678 235778;235779 235779 925;926 2 MMCGAPSATQPATAETQHIADQVRSQLEEK Acetyl (Protein N-term) 3326.533 0.53295955 772 P04080 CSTB Cystatin-B yes yes 1 0 1 By MS/MS By MS/MS 2 0 4 3 1 91.879 87.592 3 1.4133E-118 107175 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145.34 143.19 224760000 0 211570000 13190000 0 0 0 0 0 0 0 0 0 0 0 0 35633 772 32082 297679;297680;297681;297682 235780;235781;235782;235783 235780 4 MMCGAPSATQPATAETQHIADQVRSQLEEK Acetyl (Protein N-term);Oxidation (M) 3342.5279 0.52787417 772 P04080 CSTB Cystatin-B yes yes 1 1 1 By MS/MS 2 0 1 1 85.848 83.416 3 3.3674E-13 100988 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 63.901 61.87 28207000 0 0 28207000 0 0 0 0 0 0 0 0 0 0 0 0 35634 772 32082 297683 235784 235784 925;926 1 MMDIVAAK Unmodified 877.44015 0.44014542 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 47.384 47.548 2 0.03349 54034 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 53.679 35.985 96984000 0 0 0 3204400 5909800 7094700 6442100 11526000 0 7851900 10777000 10226000 10033000 8042200 15876000 35635 2556 32083 297684;297685;297686;297687;297688;297689;297690;297691;297692;297693;297694 235785;235786;235787;235788 235788 4 MMDIVAAK 2 Oxidation (M) 909.42997 0.42997466 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 2 0 By MS/MS By MS/MS 10 0 2 1 1 19.261 19.677 2 0.02376 18794 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 41.892 24.928 7639300 0 0 0 0 0 0 0 0 0 0 4206000 0 0 3433300 0 35636 2556 32083 297695;297696 235789 235789 1 MMDYLQGSGETPQTDVR Unmodified 1926.8452 0.8451622 2441 Q14697 GANAB Neutral alpha-glucosidase AB yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 64.18 64.265 2 1.9977E-18 72787 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 128.54 122.3 106340000 0 0 0 3908500 3231600 5260000 3736500 4960300 0 7556700 13039000 9382100 5699900 10156000 39409000 35637 2441 32084 297697;297698;297699;297700;297701;297702;297703;297704;297705;297706;297707 235790;235791;235792;235793;235794;235795;235796;235797;235798;235799;235800 235793 10 MMDYLQGSGETPQTDVR Oxidation (M) 1942.8401 0.84007682 2441 Q14697 GANAB Neutral alpha-glucosidase AB yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 2 1 1 2 2 2 1 2 2 56.215 56.525 2 6.0874E-46 64856 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 153.63 150.1 105180000 0 0 0 0 0 0 7403300 3776800 2137100 9632000 17905000 16845000 3112200 9870700 34497000 35638 2441 32084 297708;297709;297710;297711;297712;297713;297714;297715;297716;297717;297718;297719;297720;297721;297722 235801;235802;235803;235804;235805;235806;235807;235808;235809;235810;235811;235812;235813;235814 235808 4004;4005 14 MMDYLQGSGETPQTDVR 2 Oxidation (M) 1958.835 0.83499145 2441 Q14697 GANAB Neutral alpha-glucosidase AB yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 2 1 2 2 48.906 49.174 2 8.7792E-38 54281 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 136.24 123.04 79720000 0 0 0 0 6442600 0 0 9399500 0 0 16782000 0 0 19026000 28070000 35639 2441 32084 297723;297724;297725;297726;297727;297728;297729;297730 235815;235816;235817;235818;235819 235815 4004;4005 4 MMEDMNLNEDK Unmodified 1368.536 0.53597265 4630 Q9NSV4 DIAPH3 Protein diaphanous homolog 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 47.195 47.429 2 0.00032485 53610 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 95.775 90.293 85279000 0 0 0 0 5631000 4967200 3110100 6183800 3774400 7594300 12604000 10224000 7004700 7931700 16254000 35640 4630 32085 297731;297732;297733;297734;297735;297736;297737;297738;297739;297740;297741 235820;235821;235822;235823;235824;235825;235826;235827;235828;235829;235830 235820 11 MMEDMNLNEDK 2 Oxidation (M) 1400.5258 0.5258019 4630 Q9NSV4 DIAPH3 Protein diaphanous homolog 3 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 27.904 28.018 2 0.0010617 30033 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 64.297 59.309 15513000 0 0 0 0 3088800 0 3342400 0 2772600 0 3910500 0 0 2398500 0 35641 4630 32085 297742;297743;297744;297745;297746;297747 235831;235832;235833;235834;235835 235833 6025;6026;6027 5 MMEDMNLNEDK Oxidation (M) 1384.5309 0.53088728 4630 Q9NSV4 DIAPH3 Protein diaphanous homolog 3 yes yes 0 1 0 By MS/MS 2 0 1 1 31.683 27.23 2 0.042036 35643 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 54.608 42.894 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35642 4630 32085 297748 235836 235836 6025;6026;6027 1 MMEDMNLNEDK 3 Oxidation (M) 1416.5207 0.52071652 4630 Q9NSV4 DIAPH3 Protein diaphanous homolog 3 yes yes 0 3 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 13.613 13.797 2 0.00046085 12840 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 78.934 68.411 27804000 0 0 0 2739300 2956500 0 2105300 0 0 2560500 2393500 5349400 4526900 1838300 3334600 35643 4630 32085 297749;297750;297751;297752;297753;297754;297755;297756;297757 235837;235838 235838 6025;6026;6027 2 MMEEFVPHSK Unmodified 1233.5522 0.55221507 5094 Q9Y2A7 NCKAP1 Nck-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 49.225 48.286 3 0.0011129 63978 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.488 72.194 160990000 44568000 54464000 0 2735900 1840700 6819800 3602500 3261900 0 7676000 6370000 6296100 5769700 6071900 11511000 35644 5094 32086 297758;297759;297760;297761;297762;297763;297764;297765;297766;297767;297768;297769;297770 235839;235840;235841;235842;235843 235841 5 MMEEFVPHSK 2 Oxidation (M) 1265.542 0.54204431 5094 Q9Y2A7 NCKAP1 Nck-associated protein 1 yes yes 0 2 0 By MS/MS By MS/MS 2.25 0.433 3 1 2 2 29.96 26.186 2;3 0.0095503 33100 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 82.287 70.24 75742000 0 31057000 44685000 0 0 0 0 0 0 0 0 0 0 0 0 35645 5094 32086 297771;297772;297773;297774 235844;235845;235846;235847 235847 6494;6495 2 MMEGLDDGPDFLSEEDRGLK Acetyl (Protein N-term);2 Oxidation (M) 2326.9933 0.99334258 5032 Q9UNH7 SNX6 Sorting nexin-6;Sorting nexin-6, N-terminally processed yes yes 1 2 1 By MS/MS 3 0 1 1 82.632 79.36 3 6.0319E-06 95060 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 63.302 62.529 12165000 0 12165000 0 0 0 0 0 0 0 0 0 0 0 0 0 35646 5032 32087 297775 235848 235848 6381;6382 1 MMEIFSETKDVFQLKDLEK Unmodified 2330.1538 0.15380639 4214 Q9BWT6 MND1 Meiotic nuclear division protein 1 homolog yes yes 0 0 2 By MS/MS 2 0 1 1 21.573 18.77 6 0.048451 23944 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 18.156 1.1347 2087600 0 0 2087600 0 0 0 0 0 0 0 0 0 0 0 0 35647 4214 32088 297776 235849 235849 0 MMEIMTR Oxidation (M) 926.40238 0.40237971 1842 P61247 RPS3A 40S ribosomal protein S3a yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 33 2 2 2 3 3 3 3 3 3 3 3 3 33.481 33.71 2 0.024576 40499 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 69.998 59.861 297360000 0 0 0 15044000 13968000 15332000 18586000 19376000 17431000 27936000 29437000 42997000 27125000 31061000 39065000 35648 1842 32089 297777;297778;297779;297780;297781;297782;297783;297784;297785;297786;297787;297788;297789;297790;297791;297792;297793;297794;297795;297796;297797;297798;297799;297800;297801;297802;297803;297804;297805;297806;297807;297808;297809 235850;235851;235852;235853;235854;235855;235856;235857;235858;235859;235860 235857 2991;2992;2993 11 MMEIMTR Unmodified 910.40747 0.40746508 1842 P61247 RPS3A 40S ribosomal protein S3a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 47.643 47.967 2 0.028921 54292 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 76.134 65.997 265660000 0 0 0 0 0 16177000 15217000 0 13013000 26065000 30337000 41019000 26451000 31301000 66082000 35649 1842 32089 297810;297811;297812;297813;297814;297815;297816;297817;297818 235861;235862;235863;235864;235865 235861 5 MMEIMTR 2 Oxidation (M) 942.39729 0.39729433 1842 P61247 RPS3A 40S ribosomal protein S3a yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 20.12 20.215 2 0.034943 20653 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 42.914 23.068 44432000 0 0 0 4877600 4139600 4574300 4096200 3889900 3895400 6022000 6776500 0 6160200 0 0 35650 1842 32089 297819;297820;297821;297822;297823;297824;297825;297826;297827 235866;235867 235867 2991;2992;2993 2 MMEIMTREVQTNDLK 3 Oxidation (M) 1885.8584 0.85836943 1842 P61247 RPS3A 40S ribosomal protein S3a yes yes 0 3 1 By MS/MS 2 0 1 1 43.941 37.148 3 0.00037351 50839 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.185 52.398 20375000 20375000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35651 1842 32090 297828 235868;235869 235869 2991;2992;2993 2 MMEIMTREVQTNDLK Oxidation (M) 1853.8685 0.86854018 1842 P61247 RPS3A 40S ribosomal protein S3a yes yes 0 1 1 By MS/MS By MS/MS 2 0 5 2 3 61.357 55.77 3 0.00035054 74024 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 71.692 65.424 150750000 86577000 0 64172000 0 0 0 0 0 0 0 0 0 0 0 0 35652 1842 32090 297829;297830;297831;297832;297833 235870;235871;235872;235873;235874;235875;235876 235876 2991;2992;2993 7 MMEIMTREVQTNDLK Unmodified 1837.8736 0.87362556 1842 P61247 RPS3A 40S ribosomal protein S3a yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 74.036 67.521 2;3 3.4439E-22 88929 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 124.86 79.498 176420000 169730000 0 6688000 0 0 0 0 0 0 0 0 0 0 0 0 35653 1842 32090 297834;297835;297836 235877;235878;235879;235880 235878 4 MMENGIK 2 Oxidation (M) 853.36737 0.36737441 1405 P39748 FEN1 Flap endonuclease 1 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 5.8894 6.0384 2 0.028348 3600 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 46.37 29.444 7956100 0 0 0 0 0 3079500 0 0 0 2972500 0 0 1652800 251180 0 35654 1405 32091 297837;297838;297839;297840 235881;235882 235882 2 MMESYIAVLTK Oxidation (M) 1300.6407 0.64069572 3488 Q8TCE6;Q6NSW5 FAM45A;FAM45B Protein FAM45A;Protein FAM45B yes no 0 1 0 By MS/MS 2 0 1 1 84.557 76.426 2 0.03052 100254 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.276 36.068 108590000 108590000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35655 3488 32092 297841 235883 235883 1 MMGGAGPGSSLEAR 2 Oxidation (M) 1351.586 0.58603439 690 O95785 WIZ Protein Wiz yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 25.246 25.485 2 0.00012664 27113 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 72.652 69.081 59064000 0 0 0 0 7174400 5638500 7250200 4027600 5402700 4688600 3383200 5066800 4494000 4314900 7622700 35656 690 32093 297842;297843;297844;297845;297846;297847;297848;297849;297850;297851;297852 235884;235885;235886;235887;235888;235889;235890;235891;235892;235893;235894 235886 838;839 10 MMGHRPVLVLSQNTK Acetyl (Protein N-term);2 Oxidation (M) 1783.9073 0.90730895 1570 P49368 CCT3 T-complex protein 1 subunit gamma yes yes 1 2 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.65 1.63 1 22 1 2 1 2 2 2 2 1 2 2 2 2 2 48.823 48.65 2;3 1.3779E-23 53518 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 119.65 111.4 2248400000 22521000 0 0 122290000 120910000 265730000 181200000 114200000 164780000 195200000 204450000 299310000 179590000 130620000 247610000 35657 1570 32094 297853;297854;297855;297856;297857;297858;297859;297860;297861;297862;297863;297864;297865;297866;297867;297868;297869;297870;297871;297872;297873;297874;297875 235895;235896;235897;235898;235899;235900;235901;235902;235903;235904;235905;235906;235907;235908;235909;235910;235911 235900 2516;2517 17 MMGHRPVLVLSQNTK Acetyl (Protein N-term) 1751.9175 0.9174797 1570 P49368 CCT3 T-complex protein 1 subunit gamma yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 70.211 70.391 3 3.8343E-06 80007 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.451 64.035 156050000 0 0 0 0 0 30847000 0 0 13785000 0 0 0 11898000 0 99516000 35658 1570 32094 297876;297877;297878;297879 235912;235913 235913 2 MMGHRPVLVLSQNTK Acetyl (Protein N-term);Oxidation (M) 1767.9124 0.91239433 1570 P49368 CCT3 T-complex protein 1 subunit gamma yes yes 1 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 2 1 1 1 1 1 1 1 57.397 57.745 3 5.4086E-05 65005 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 68.481 55.603 173340000 0 0 0 0 0 0 14022000 0 0 0 32437000 44956000 13225000 13801000 54903000 35659 1570 32094 297880;297881;297882;297883;297884;297885;297886;297887;297888 235914;235915;235916;235917;235918;235919;235920;235921;235922 235920 2516;2517 8 MMGLEVLGEK Oxidation (M) 1121.5461 0.54606706 2168 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 26 2 2 2 2 1 2 2 2 2 3 3 3 66.116 66.205 2 0.0024658 74437 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 75.378 57.983 204910000 0 0 0 10786000 7652300 16156000 8821400 6166500 7052500 12964000 19628000 13144000 30604000 33211000 38721000 35660 2168 32095 297889;297890;297891;297892;297893;297894;297895;297896;297897;297898;297899;297900;297901;297902;297903;297904;297905;297906;297907;297908;297909;297910;297911;297912;297913;297914 235923;235924;235925;235926;235927;235928;235929;235930;235931;235932;235933;235934;235935;235936;235937;235938;235939 235935 3484;3485 17 MMGLEVLGEK Unmodified 1105.5512 0.55115243 2168 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.412 77.469 2 0.0021721 89478 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 85.862 72.595 126380000 0 0 0 4325500 4643900 13564000 3709200 8622500 5264900 10714000 9815900 12752000 7589200 16022000 29359000 35661 2168 32095 297915;297916;297917;297918;297919;297920;297921;297922;297923;297924;297925;297926 235940;235941;235942;235943;235944;235945;235946;235947;235948;235949;235950;235951 235940 12 MMGLEVLGEK 2 Oxidation (M) 1137.541 0.54098168 2168 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 52.834 52.975 2 0.002092 61016 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 64.841 41.412 392470000 0 0 0 12762000 9317400 46130000 12503000 0 32189000 38091000 44676000 51450000 49931000 21305000 74120000 35662 2168 32095 297927;297928;297929;297930;297931;297932;297933;297934;297935;297936;297937 235952;235953;235954;235955;235956;235957;235958;235959 235958 3484;3485 6 MMHSNMETLYK Unmodified 1383.5985 0.59851333 417 O60610 DIAPH1 Protein diaphanous homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 42.528 42.715 3 0.0053892 46513 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.955 30.034 101660000 0 0 0 4349800 6108700 6395300 0 6857000 3376900 10165000 14892000 5407900 9390600 16006000 18715000 35663 417 32096 297938;297939;297940;297941;297942;297943;297944;297945;297946;297947;297948 235960;235961 235960 2 MMILEVDETR 2 Oxidation (M) 1267.5788 0.57882375 4630 Q9NSV4 DIAPH3 Protein diaphanous homolog 3 yes yes 0 2 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 48.499 48.362 2 0.0035539 54446 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 55.064 23.129 7610500 0 0 0 2286400 0 0 0 0 0 0 0 0 5324100 0 0 35664 4630 32097 297949;297950;297951;297952;297953 235962;235963;235964;235965 235965 6028;6029 4 MMILEVDETR Oxidation (M) 1251.5839 0.58390912 4630 Q9NSV4 DIAPH3 Protein diaphanous homolog 3 yes yes 0 1 0 By MS/MS 10 0 1 1 62.247 62.443 2 0.015874 70488 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 45.137 37.917 2304900 0 0 0 0 0 0 0 0 0 0 0 0 0 2304900 0 35665 4630 32097 297954 235966 235966 6028;6029 1 MMIPDCQR Oxidation (M) 1065.4406 0.44055613 482 O75347 TBCA Tubulin-specific chaperone A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 27.659 28.203 2 0.038383 29312 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.447 33.813 29158000 0 0 0 0 0 0 0 0 0 0 7316700 6178700 0 4420600 11242000 35666 482 32098 297955;297956;297957;297958 235967 235967 1 MMIPDCQR Unmodified 1049.4456 0.4456415 482 O75347 TBCA Tubulin-specific chaperone A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 40.509 41.069 2 0.016586 45191 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 67.032 57.003 149510000 0 0 0 0 0 0 0 0 0 0 25160000 22799000 0 18040000 83511000 35667 482 32098 297959;297960;297961;297962 235968;235969;235970;235971 235971 4 MMIPDCQR 2 Oxidation (M) 1081.4355 0.43547075 482 O75347 TBCA Tubulin-specific chaperone A yes yes 0 2 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 18.654 19.124 2 0.02162 18501 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.799 43.413 9287400 0 0 0 0 0 0 0 0 0 0 2686800 0 0 1973500 4627100 35668 482 32098 297963;297964;297965 235972 235972 0 MMIPDCQRR Unmodified 1205.5468 0.54675253 482 O75347 TBCA Tubulin-specific chaperone A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 32.302 32.858 3 0.0098055 34746 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.827 67.139 51846000 0 0 0 0 0 0 0 0 0 0 6803200 10995000 0 6162500 27885000 35669 482 32099 297966;297967;297968;297969 235973;235974 235973 1 MMLDDIVSR 2 Oxidation (M) 1110.5049 0.50493052 3690 Q92945 KHSRP Far upstream element-binding protein 2 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 21 2 1 3 1 3 1 1 2 3 1 2 1 47.127 47.318 2 0.0024334 52799 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 72.23 16.328 280100000 0 0 0 20352000 12476000 27683000 15884000 21862000 13295000 19833000 35670000 59353000 16973000 20298000 16419000 35670 3690 32100 297970;297971;297972;297973;297974;297975;297976;297977;297978;297979;297980;297981;297982;297983;297984;297985;297986;297987;297988;297989;297990 235975;235976;235977;235978;235979;235980;235981;235982;235983;235984;235985;235986;235987;235988;235989;235990;235991;235992;235993 235985 5250;5251 14 MMLDDIVSR Unmodified 1078.5151 0.51510128 3690 Q92945 KHSRP Far upstream element-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.958 73.021 2 0.0051384 83022 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 82.426 46.031 201150000 0 0 0 5673400 7032900 13178000 8091600 11535000 9034600 13656000 17733000 19604000 10070000 16897000 68640000 35671 3690 32100 297991;297992;297993;297994;297995;297996;297997;297998;297999;298000;298001;298002 235994;235995;235996;235997;235998;235999;236000;236001;236002;236003;236004 236001 11 MMLDDIVSR Oxidation (M) 1094.51 0.5100159 3690 Q92945 KHSRP Far upstream element-binding protein 2 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 2 1 2 2 1 2 2 2 3 1 1 61.964 62.057 2 0.015846 68978 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 50.805 23.551 190910000 0 0 0 14946000 9334100 16532000 16044000 0 5005800 19170000 30166000 30460000 23798000 8886000 16568000 35672 3690 32100 298003;298004;298005;298006;298007;298008;298009;298010;298011;298012;298013;298014;298015;298016;298017;298018;298019;298020;298021 236005;236006;236007;236008;236009 236006 5250;5251 4 MMLEQER Unmodified 935.42047 0.42047261 1328 P33176 KIF5B Kinesin-1 heavy chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.627 28.821 2 0.026014 30876 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 79.597 51.085 224250000 0 0 0 15066000 10974000 16514000 8651100 20395000 9184900 20458000 26463000 32659000 16497000 12357000 35036000 35673 1328 32101 298022;298023;298024;298025;298026;298027;298028;298029;298030;298031;298032;298033 236010;236011;236012;236013;236014 236011 5 MMLEQER Oxidation (M) 951.41539 0.41538723 1328 P33176 KIF5B Kinesin-1 heavy chain yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 17.457 17.632 2 0.034983 17339 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 58.819 34.847 50080000 0 0 0 0 3992900 5754600 4075000 4473500 3798800 5606600 6621700 9472100 6285000 0 0 35674 1328 32101 298034;298035;298036;298037;298038;298039;298040;298041;298042 236015;236016 236015 2 MMLEQER 2 Oxidation (M) 967.4103 0.41030186 1328 P33176 KIF5B Kinesin-1 heavy chain yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 9.4694 9.632 2 0.028275 8072 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 46.426 30.987 31874000 0 0 0 0 2699000 3550900 4177700 1751400 2576000 3406000 743670 4528900 3064800 2682300 2693200 35675 1328 32101 298043;298044;298045;298046;298047;298048;298049;298050;298051;298052;298053 236017 236017 1 MMLGPEGGEGFVVK Acetyl (Protein N-term) 1491.7102 0.71017227 1692 P52597 HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes yes 1 0 0 By MS/MS 2 0 1 1 94.03 89.134 2 5.0799E-10 110572 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.39 87.701 87527000 0 87527000 0 0 0 0 0 0 0 0 0 0 0 0 0 35676 1692 32102 298054 236018 236018 1 MMLGPEGGEGFVVK Acetyl (Protein N-term);Oxidation (M) 1507.7051 0.70508689 1692 P52597 HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes yes 1 1 0 By MS/MS 10 0 1 1 85.514 85.683 2 0.0037837 99016 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.894 33.736 3398700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3398700 35677 1692 32102 298055 236019 236019 2736;2737 0 MMLGPEGGEGFVVK Acetyl (Protein N-term);2 Oxidation (M) 1523.7 0.70000151 1692 P52597 HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes yes 1 2 0 By MS/MS 1 0 1 1 104.17 105.06 2 8.9222E-05 96666 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 80.763 65.148 5195500 0 5195500 0 0 0 0 0 0 0 0 0 0 0 0 0 35678 1692 32102 298056 236020 236020 2736;2737 1 MMLGTEGGEGFVVK Acetyl (Protein N-term);2 Oxidation (M) 1527.6949 0.69491614 1309 P31943 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed yes yes 1 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.5 2 2 12 3 1 1 1 1 1 1 1 1 1 1 1 1 1 77.943 78.176 2;3 1.6775E-30 89187 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 141.88 134.98 395630000 54045000 9053600 0 17846000 24185000 24412000 29231000 18374000 21201000 38485000 30936000 38667000 31883000 25029000 32285000 35679 1309 32103 298057;298058;298059;298060;298061;298062;298063;298064;298065;298066;298067;298068;298069;298070;298071;298072 236021;236022;236023;236024;236025;236026;236027;236028;236029;236030;236031;236032;236033;236034;236035;236036 236028 1936;1937 14 MMLGTEGGEGFVVK Acetyl (Protein N-term);Oxidation (M) 1511.7 0.70000151 1309 P31943 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.04 3.42 1 4 2 21 3 4 2 1 2 1 2 1 2 2 2 2 2 2 84.418 83.505 2 1.0577E-40 90378 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 166.55 145.68 770380000 78931000 354450000 0 9861200 12029000 24937000 10330000 23577000 13557000 43951000 41753000 42253000 26260000 29429000 59063000 35680 1309 32103 298073;298074;298075;298076;298077;298078;298079;298080;298081;298082;298083;298084;298085;298086;298087;298088;298089;298090;298091;298092;298093;298094;298095;298096;298097;298098;298099;298100 236037;236038;236039;236040;236041;236042;236043;236044;236045;236046;236047;236048;236049;236050;236051;236052;236053;236054;236055;236056;236057;236058;236059;236060;236061;236062;236063;236064;236065 236049 1936;1937 29 MMLGTEGGEGFVVK Acetyl (Protein N-term) 1495.7051 0.70508689 1309 P31943 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.72 1 3 1 11 2 3 1 1 1 1 1 1 1 1 1 1 1 91.345 90.707 2 5.2306E-30 91828 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 140.49 117.84 1030600000 70315000 895750000 0 1097400 3354500 3123900 2308600 4816500 2370100 9490000 7222800 5605300 3022100 0 22121000 35681 1309 32103 298101;298102;298103;298104;298105;298106;298107;298108;298109;298110;298111;298112;298113;298114;298115;298116 236066;236067;236068;236069;236070;236071;236072;236073;236074;236075;236076;236077;236078;236079;236080;236081 236076 16 MMLSGGAPLSPQTHR Unmodified 1581.7756 0.77556649 403 O60488 ACSL4 Long-chain-fatty-acid--CoA ligase 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 54.864 55.08 3 0.014391 62805 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 41.378 34.339 122700000 0 0 0 0 8278100 9507300 0 13108000 8758200 10926000 12906000 17086000 10657000 11596000 19874000 35682 403 32104 298117;298118;298119;298120;298121;298122;298123;298124;298125;298126 236082;236083;236084 236084 2 MMLSTEGR Acetyl (Protein N-term) 965.43104 0.4310373 1773 P55795 HNRNPH2 Heterogeneous nuclear ribonucleoprotein H2 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 62.449 62.822 2 0.017274 70856 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 45.68 33.249 21042000 0 0 0 0 0 0 0 0 0 0 5653000 0 0 4290700 11098000 35683 1773 32105 298127;298128;298129 236085 236085 1 MMLSTEGREGFVVK Acetyl (Protein N-term);2 Oxidation (M) 1656.7851 0.78512813 1773 P55795 HNRNPH2 Heterogeneous nuclear ribonucleoprotein H2 yes yes 1 2 1 By MS/MS By MS/MS 2.5 0.5 2 2 3 1 66.696 61.93 2 6.8752E-05 75434 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 73.632 63.944 32581000 0 27336000 5244900 0 0 0 0 0 0 0 0 0 0 0 0 35684 1773 32106 298130;298131;298132;298133 236086;236087;236088 236087 2892;2893 3 MMLSTEGREGFVVK Acetyl (Protein N-term) 1624.7953 0.79529888 1773 P55795 HNRNPH2 Heterogeneous nuclear ribonucleoprotein H2 yes yes 1 0 1 By MS/MS By MS/MS 2 0 2 1 1 85.715 82.089 2 2.8484E-14 102133 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.23 90.753 69597000 0 64528000 5069000 0 0 0 0 0 0 0 0 0 0 0 0 35685 1773 32106 298134;298135 236089;236090;236091 236090 3 MMLSTEGREGFVVK Acetyl (Protein N-term);Oxidation (M) 1640.7902 0.79021351 1773 P55795 HNRNPH2 Heterogeneous nuclear ribonucleoprotein H2 yes yes 1 1 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 1 2 78.167 73.659 2 0.00014438 93913 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.659 49.892 26930000 11854000 0 15076000 0 0 0 0 0 0 0 0 0 0 0 0 35686 1773 32106 298136;298137;298138;298139 236092;236093;236094;236095 236093 2892;2893 4 MMMMALSK Acetyl (Protein N-term) 983.43124 0.43123699 2194 Q12824 SMARCB1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 yes yes 1 0 0 By MS/MS By MS/MS 2 0 2 1 1 94.842 88.329 2 0.019006 111171 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 57.047 44.691 39191000 17165000 22026000 0 0 0 0 0 0 0 0 0 0 0 0 0 35687 2194 32107 298140;298141 236096;236097 236096 2 MMMVLGAK 3 Oxidation (M) 927.42278 0.4227808 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 3 0 By MS/MS By MS/MS 2 0 2 1 1 20.03 16.885 2 0.035464 21723 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 46.663 12.925 8262400 0 5424600 2837800 0 0 0 0 0 0 0 0 0 0 0 0 35688 2451 32108 298142;298143 236098;236099 236098 1 MMNGGHYTYSENRVEK 2 Oxidation (M) 1946.8251 0.82509546 4015 Q99497 PARK7 Protein deglycase DJ-1 yes yes 0 2 1 By MS/MS By MS/MS By MS/MS 2 0 6 2 2 2 22.417 18.544 3;4 5.0223E-15 23483 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 115.91 111.93 644750000 437640000 34065000 173050000 0 0 0 0 0 0 0 0 0 0 0 0 35689 4015 32109 298144;298145;298146;298147;298148;298149 236100;236101;236102 236102 5516;5517 3 MMNGGHYTYSENRVEK Oxidation (M) 1930.8302 0.83018084 4015 Q99497 PARK7 Protein deglycase DJ-1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.13 3.54 11 4 5 3 3 1 1 1 1 27.074 23.849 3;4 1.3909E-24 31766 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 137.39 132.34 1565600000 1442500000 28996000 55561000 0 0 0 0 0 0 0 5999200 6858400 0 5167500 20517000 35690 4015 32109 298150;298151;298152;298153;298154;298155;298156;298157;298158;298159;298160;298161;298162;298163;298164 236103;236104;236105;236106;236107;236108;236109;236110;236111;236112;236113 236109 5516;5517 8 MMNGGHYTYSENRVEK Unmodified 1914.8353 0.83526622 4015 Q99497 PARK7 Protein deglycase DJ-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.14 3.83 5 9 2 2 1 1 2 2 2 2 30.662 29.121 3;4 7.5023E-05 39862 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.151 70.68 1346100000 1016400000 48950000 2912900 3238700 0 0 0 0 0 0 39919000 47707000 0 22865000 164120000 35691 4015 32109 298165;298166;298167;298168;298169;298170;298171;298172;298173;298174;298175;298176;298177;298178 236114;236115;236116;236117;236118;236119;236120;236121 236115 7 MMNTIIFHTK Unmodified 1234.6202 0.62023505 5094 Q9Y2A7 NCKAP1 Nck-associated protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 74.252 66.122 3 0.0033128 87470 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.499 52.127 8126800 8126800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35692 5094 32110 298179 236122 236122 1 MMNTIIFHTK 2 Oxidation (M) 1266.6101 0.6100643 5094 Q9Y2A7 NCKAP1 Nck-associated protein 1 yes yes 0 2 0 By MS/MS 2 0 1 1 50.07 42.169 3 0.0045378 58417 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.627 58.06 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35693 5094 32110 298180 236123 236123 6496;6497 1 MMPTPVILLK Acetyl (Protein N-term);Oxidation (M) 1199.6658 0.66578826 4065 Q99832 CCT7 T-complex protein 1 subunit eta yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.58 3.65 1 5 2 18 3 4 1 1 1 2 2 2 1 1 1 1 2 2 2 93.924 92.846 2 0.00059567 106918 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 72.485 61.775 2318500000 117420000 1511300000 2745700 10486000 33835000 73778000 50276000 66246000 12188000 23327000 27874000 80563000 58481000 83555000 166480000 35694 4065 32111 298181;298182;298183;298184;298185;298186;298187;298188;298189;298190;298191;298192;298193;298194;298195;298196;298197;298198;298199;298200;298201;298202;298203;298204;298205;298206 236124;236125;236126;236127;236128;236129;236130;236131;236132;236133;236134;236135;236136;236137;236138;236139;236140;236141;236142;236143;236144;236145;236146;236147;236148;236149;236150 236147 5565;5566 23 MMPTPVILLK Acetyl (Protein N-term);2 Oxidation (M) 1215.6607 0.66070288 4065 Q99832 CCT7 T-complex protein 1 subunit eta yes yes 1 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.79 2.8 2 1 16 2 1 2 2 2 2 2 2 2 2 85.61 85.181 1;2 0.00029843 98693 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 82.452 65.213 1185800000 0 236030000 6182000 0 0 0 135300000 0 83867000 108330000 115030000 162240000 106830000 96029000 136000000 35695 4065 32111 298207;298208;298209;298210;298211;298212;298213;298214;298215;298216;298217;298218;298219;298220;298221;298222;298223;298224;298225 236151;236152;236153;236154;236155;236156;236157;236158;236159;236160;236161;236162;236163;236164;236165;236166;236167;236168;236169;236170;236171;236172 236151 5565;5566 19 MMPTPVILLK Acetyl (Protein N-term) 1183.6709 0.67087364 4065 Q99832 CCT7 T-complex protein 1 subunit eta yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.63 1 2 1 10 2 2 1 1 1 1 1 1 1 1 1 1 99.085 98.387 2 0.0027216 113579 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 69.598 53.936 2318900000 41389000 1994500000 0 0 13390000 0 8082800 27309000 10950000 34404000 27770000 22183000 12402000 27344000 99122000 35696 4065 32111 298226;298227;298228;298229;298230;298231;298232;298233;298234;298235;298236;298237;298238;298239 236173;236174;236175;236176;236177;236178;236179;236180;236181;236182;236183;236184;236185;236186;236187 236182 15 MMPTPVILLK Unmodified 1141.6603 0.66030895 4065 Q99832 CCT7 T-complex protein 1 subunit eta yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 93.007 86.486 2 0.030959 109996 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.596 42.056 52644000 27068000 25576000 0 0 0 0 0 0 0 0 0 0 0 0 0 35697 4065 32111 298240;298241 236188;236189 236189 2 MMPTPVILLK Oxidation (M) 1157.6552 0.65522357 4065 Q99832 CCT7 T-complex protein 1 subunit eta yes yes 0 1 0 By MS/MS 2 0 1 1 89.632 81.501 2 0.030319 105840 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.047 40.271 20485000 20485000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35698 4065 32111 298242 236190 236190 5565;5566 1 MMQAEEAPK Unmodified 1033.4573 0.45725205 2027 P98194 ATP2C1 Calcium-transporting ATPase type 2C member 1 yes yes 0 0 0 By MS/MS 2 0 1 1 22.891 18.865 2 0.04564 25074 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.981 34.058 8166800 0 8166800 0 0 0 0 0 0 0 0 0 0 0 0 0 35699 2027 32112 298243 236191 236191 1 MMQINLTGFLNGK 2 Oxidation (M) 1497.732 0.73197035 3279 Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 yes yes 0 2 0 By MS/MS 10 0 1 1 82.975 83.165 2 0.02446 95964 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.718 33.063 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35700 3279 32113 298244 236192 236192 1 MMQLVSSGVENALTK 2 Oxidation (M) 1638.7957 0.79569281 4020 Q99541 PLIN2 Perilipin-2 yes yes 0 2 0 By MS/MS By MS/MS 10 0 2 1 1 64.712 64.193 2 0.00027342 73835 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 66.262 46.501 1943300 0 0 0 0 1943300 0 0 0 0 0 0 0 0 0 0 35701 4020 32114 298245;298246 236193;236194 236194 5523;5524 1 MMTPEVLAEAYGK Oxidation (M) 1454.6785 0.67853779 2797 Q5TFE4 NT5DC1 5'-nucleotidase domain-containing protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.29 0.452 5 2 1 4 2 78.144 73.877 2 0.00062578 93210 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.258 84.044 386090000 6600200 368770000 10719000 0 0 0 0 0 0 0 0 0 0 0 0 35702 2797 32115 298247;298248;298249;298250;298251;298252;298253 236195;236196;236197;236198;236199;236200 236195 4427;4428 6 MMTPEVLAEAYGK Unmodified 1438.6836 0.68362317 2797 Q5TFE4 NT5DC1 5'-nucleotidase domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 4 3.46 3 1 1 1 1 1 83.891 80.103 2 2.2117E-08 100220 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.54 90.307 383150000 10893000 359070000 5892100 0 0 0 0 0 0 0 0 0 0 0 7295400 35703 2797 32115 298254;298255;298256;298257 236201;236202;236203;236204 236201 4 MMTPEVLAEAYGK 2 Oxidation (M) 1470.6735 0.67345241 2797 Q5TFE4 NT5DC1 5'-nucleotidase domain-containing protein 1 yes yes 0 2 0 By MS/MS 2 0 1 1 67.252 63.509 2 0.0020526 78713 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 73.499 64.918 4542200 0 0 4542200 0 0 0 0 0 0 0 0 0 0 0 0 35704 2797 32115 298258 236205 236205 4427;4428 0 MMTYIEK Oxidation (M) 930.41908 0.41907563 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 1 0 By MS/MS 2 0 1 1 33.78 29.136 2 0.041144 37624 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.741 77.741 24239000 0 24239000 0 0 0 0 0 0 0 0 0 0 0 0 0 35705 5189 32116 298259 236206 236206 1 MMVAGFK 2 Oxidation (M) 814.37173 0.3717315 2046 Q00839 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.48 2.98 2 4 23 3 3 2 2 2 2 2 2 2 2 2 2 1 2 23.194 22.409 2 0.010815 24196 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 72.021 45.912 2364500000 153830000 53076000 0 136520000 133830000 189460000 150970000 119810000 171640000 236570000 219160000 294170000 271990000 89055000 144410000 35706 2046 32117 298260;298261;298262;298263;298264;298265;298266;298267;298268;298269;298270;298271;298272;298273;298274;298275;298276;298277;298278;298279;298280;298281;298282;298283;298284;298285;298286;298287;298288 236207;236208;236209;236210;236211;236212;236213;236214;236215;236216;236217;236218;236219;236220;236221;236222;236223;236224;236225;236226;236227;236228;236229;236230;236231;236232 236208 3312;3313 23 MMVAGFK Oxidation (M) 798.37682 0.37681688 2046 Q00839 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.25 2.33 3 29 2 1 2 1 3 2 2 3 3 3 3 2 2 3 36.828 36.45 1;2 0.021995 38741 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 72.021 49.398 3197900000 673830000 28930000 0 47859000 31537000 308090000 189710000 150630000 259250000 288400000 129310000 419030000 279580000 80056000 311660000 35707 2046 32117 298289;298290;298291;298292;298293;298294;298295;298296;298297;298298;298299;298300;298301;298302;298303;298304;298305;298306;298307;298308;298309;298310;298311;298312;298313;298314;298315;298316;298317;298318;298319;298320 236233;236234;236235;236236;236237;236238;236239;236240;236241;236242;236243;236244;236245;236246;236247;236248;236249;236250;236251;236252;236253 236233 3312;3313 21 MMVAGFK Unmodified 782.3819 0.38190226 2046 Q00839 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.21 48.372 2 0.027199 54376 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 77.72 49.191 2758100000 0 0 0 121130000 138670000 227190000 115940000 151200000 163540000 242850000 271010000 262170000 401740000 272870000 389810000 35708 2046 32117 298321;298322;298323;298324;298325;298326;298327;298328;298329;298330;298331;298332 236254;236255;236256;236257;236258;236259;236260;236261;236262 236257 9 MMVAGFKK 2 Oxidation (M) 942.46669 0.46669452 2046 Q00839 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 0 2 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 13.703 13.863 2 0.0066795 13295 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 86.113 32.647 658820000 0 0 0 45772000 58944000 21805000 63120000 36494000 26721000 68438000 66534000 83785000 79762000 47014000 60434000 35709 2046 32118 298333;298334;298335;298336;298337;298338;298339;298340;298341;298342;298343;298344;298345;298346;298347;298348;298349;298350;298351;298352;298353;298354;298355;298356 236263;236264;236265;236266;236267;236268;236269;236270;236271;236272;236273;236274;236275;236276;236277;236278 236271 3312;3313 3 MMVANKPDK Unmodified 1032.5096 0.50962197 428 O60749 SNX2 Sorting nexin-2 yes yes 0 0 1 By MS/MS By MS/MS By matching 2 0 3 1 1 1 15.838 12.542 2 0.027718 16445 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.91 45.889 128350000 76694000 43431000 8228300 0 0 0 0 0 0 0 0 0 0 0 0 35710 428 32119 298357;298358;298359 236279 236279 1 MMVGNNLK 2 Oxidation (M) 937.43612 0.43612268 1939 P63098 PPP3R1 Calcineurin subunit B type 1 yes yes 0 2 0 By matching By MS/MS 2 0 2 1 1 14.898 11.184 2 0.038144 14963 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.984 52.158 36022000 16453000 19569000 0 0 0 0 0 0 0 0 0 0 0 0 0 35711 1939 32120 298360;298361 236280 236280 1 MMVGNNLK Unmodified 905.44629 0.44629343 1939 P63098 PPP3R1 Calcineurin subunit B type 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 37.847 32.855 2 0.016344 43227 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.319 80.112 324130000 172490000 142370000 9260400 0 0 0 0 0 0 0 0 0 0 0 0 35712 1939 32120 298362;298363;298364 236281;236282 236281 2 MMYDQRQK Unmodified 1098.495 0.49503454 5087 Q9Y266 NUDC Nuclear migration protein nudC yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 15.111 11.859 2 0.028602 15852 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.12 126.47 237960000 192090000 22154000 23724000 0 0 0 0 0 0 0 0 0 0 0 0 35713 5087 32121 298365;298366;298367 236283;236284;236285 236283 0 MMYDQRQK 2 Oxidation (M) 1130.4849 0.48486378 5087 Q9Y266 NUDC Nuclear migration protein nudC yes yes 0 2 1 By MS/MS 2 0 1 1 5.6231 3.4181 2 0.016539 5063 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 64.757 48.876 36707000 0 0 36707000 0 0 0 0 0 0 0 0 0 0 0 0 35714 5087 32121 298368 236286 236286 6483;6484 0 MMYFLDK 2 Oxidation (M) 978.41908 0.41907563 2895 Q6N069 NAA16 N-alpha-acetyltransferase 16, NatA auxiliary subunit yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 45.195 45.276 2 0.007685 49847 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 84.244 72.875 254380000 0 0 0 7976000 13432000 13245000 25507000 19792000 27598000 32524000 43667000 70641000 0 0 0 35715 2895 32122 298369;298370;298371;298372;298373;298374;298375;298376;298377 236287;236288;236289;236290;236291;236292;236293;236294;236295 236292 4531;4532 9 MMYFLDK Oxidation (M) 962.42416 0.42416101 2895 Q6N069 NAA16 N-alpha-acetyltransferase 16, NatA auxiliary subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 2 2 2 2 1 2 2 2 2 58.211 58.246 2 0.034074 68380 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.76 52.077 323970000 0 0 0 7959100 15122000 14907000 21542000 26908000 18187000 48426000 72311000 98612000 0 0 0 35716 2895 32122 298378;298379;298380;298381;298382;298383;298384;298385;298386;298387;298388;298389;298390;298391;298392;298393;298394 236296;236297;236298;236299;236300;236301;236302 236300 4531;4532 7 MNAGSDPVVIVSAAR Acetyl (Protein N-term);Oxidation (M) 1543.7664 0.7664416 4207 Q9BWD1 ACAT2 Acetyl-CoA acetyltransferase, cytosolic yes yes 1 1 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 75.702 75.915 2 1.6466E-11 87061 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 97.551 83.557 38356000 0 0 0 0 0 0 0 0 0 4437400 0 14979000 0 0 18940000 35717 4207 32123 298395;298396;298397 236303;236304;236305 236303 5686 3 MNAGSDPVVIVSAAR Acetyl (Protein N-term) 1527.7715 0.77152697 4207 Q9BWD1 ACAT2 Acetyl-CoA acetyltransferase, cytosolic yes yes 1 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 83.294 83.366 2 1.1017E-05 96118 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 92.247 77.556 45916000 0 0 0 1745300 0 0 0 2390000 0 0 8156200 7763600 0 5532300 20329000 35718 4207 32123 298398;298399;298400;298401;298402;298403 236306;236307;236308;236309;236310 236306 5 MNALFEGR Oxidation (M) 952.44365 0.44365089 4376 Q9H307 PNN Pinin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 37.47 37.711 2 0.016838 40529 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 58.596 38.037 53931000 0 0 0 0 3199100 3346400 4055600 3960900 3321200 4312100 5877200 6935100 7122400 5117500 6683700 35719 4376 32124 298404;298405;298406;298407;298408;298409;298410;298411;298412;298413;298414 236311;236312;236313;236314;236315;236316;236317;236318;236319 236316 5833 9 MNALFEGR Unmodified 936.44874 0.44873627 4376 Q9H307 PNN Pinin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 48.845 49.11 2 0.013807 54269 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.501 51.939 49461000 0 0 0 0 6195200 0 0 4563200 0 0 0 9606500 0 8817600 20278000 35720 4376 32124 298415;298416;298417;298418;298419;298420;298421 236320;236321;236322;236323;236324;236325;236326 236320 7 MNALNEVNK Unmodified 1031.507 0.50697943 3701 Q93008 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 3 6 1 1 1 1 1 1 1 1 1 32.899 31.31 2 0.0054876 40443 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 141.52 118.59 471450000 6995300 383530000 1948700 0 0 0 9894800 0 0 0 14708000 0 18116000 16042000 20219000 35721 3701 32125 298422;298423;298424;298425;298426;298427;298428;298429;298430 236327;236328;236329;236330;236331;236332 236328 4 MNALNEVNK Oxidation (M) 1047.5019 0.50189405 3701 Q93008 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 22.367 20.421 2 0.0028263 21885 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 87.308 63.153 119950000 0 107690000 0 0 0 0 4066300 0 0 0 0 0 0 8193400 0 35722 3701 32125 298431;298432;298433;298434;298435;298436;298437;298438;298439 236333;236334;236335;236336;236337;236338;236339;236340 236334 5270 8 MNAPPAFESFLLFEGEK Acetyl (Protein N-term);Oxidation (M) 1983.9288 0.92881548 1687 P52435;Q9H1A7;Q9GZM3 POLR2J;POLR2J3;POLR2J2 DNA-directed RNA polymerase II subunit RPB11-a;DNA-directed RNA polymerase II subunit RPB11-b2;DNA-directed RNA polymerase II subunit RPB11-b1 yes no 1 1 0 By MS/MS 2.5 0.5 1 1 2 100.48 96.418 2 1.6819E-27 118801 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.5 119.09 51743000 0 51743000 0 0 0 0 0 0 0 0 0 0 0 0 0 35723 1687 32126 298440;298441 236341;236342 236341 2731 2 MNAPPAFESFLLFEGEK Acetyl (Protein N-term) 1967.9339 0.93390085 1687 P52435;Q9H1A7;Q9GZM3 POLR2J;POLR2J3;POLR2J2 DNA-directed RNA polymerase II subunit RPB11-a;DNA-directed RNA polymerase II subunit RPB11-b2;DNA-directed RNA polymerase II subunit RPB11-b1 yes no 1 0 0 By MS/MS 2 0 1 1 102.41 97.696 3 3.3412E-05 120701 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.464 64.645 6205100 0 6205100 0 0 0 0 0 0 0 0 0 0 0 0 0 35724 1687 32126 298442 236343 236343 1 MNAQETATGMAFEEPIDEK 2 Oxidation (M) 2142.9086 0.90855032 360 O43719 HTATSF1 HIV Tat-specific factor 1 yes yes 0 2 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 56.868 56.148 2 7.895E-52 70027 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.77 135.45 140270000 0 18976000 0 5895600 7567600 8815600 8894800 5567800 0 10149000 12876000 19084000 14015000 13397000 15031000 35725 360 32127 298443;298444;298445;298446;298447;298448;298449;298450;298451;298452;298453;298454;298455 236344;236345;236346;236347;236348;236349;236350;236351 236346 459;460 8 MNAQETATGMAFEEPIDEK Oxidation (M) 2126.9136 0.9136357 360 O43719 HTATSF1 HIV Tat-specific factor 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 29 2 2 2 2 3 1 3 3 3 3 3 2 66.166 66.281 2;3 1.2398E-124 77541 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 191.49 188.37 250820000 0 0 0 6491700 7151500 10582000 9738500 13656000 5348100 24032000 31713000 46618000 33394000 32841000 29258000 35726 360 32127 298456;298457;298458;298459;298460;298461;298462;298463;298464;298465;298466;298467;298468;298469;298470;298471;298472;298473;298474;298475;298476;298477;298478;298479;298480;298481;298482;298483;298484 236352;236353;236354;236355;236356;236357;236358;236359;236360;236361;236362;236363;236364;236365;236366;236367;236368;236369;236370;236371;236372;236373 236368 459;460 22 MNAQETATGMAFEEPIDEK Unmodified 2110.9187 0.91872108 360 O43719 HTATSF1 HIV Tat-specific factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.69 2.88 3 2 24 1 4 2 2 2 2 2 2 2 2 2 2 2 2 73.198 72.653 2;3 8.7383E-72 89543 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 198.87 193.97 723250000 0 426590000 0 8557600 9720500 12829000 7404300 15686000 10629000 24987000 31401000 32327000 27684000 30799000 84627000 35727 360 32127 298485;298486;298487;298488;298489;298490;298491;298492;298493;298494;298495;298496;298497;298498;298499;298500;298501;298502;298503;298504;298505;298506;298507;298508;298509;298510;298511;298512;298513 236374;236375;236376;236377;236378;236379;236380;236381;236382;236383;236384;236385;236386;236387;236388;236389;236390;236391 236378 18 MNDFGMAEEFATK Oxidation (M) 1505.6167 0.61666582 4511 Q9HCD6 TANC2 Protein TANC2 yes yes 0 1 0 By MS/MS 2 0 1 1 78.246 73.471 2 0.0022518 91657 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.625 61.635 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35728 4511 32128 298514 236392 236392 5941 1 MNDILNHK Oxidation (M) 999.48076 0.48076468 2348 Q13867 BLMH Bleomycin hydrolase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 15.696 15.836 2 0.0039393 15813 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 104.75 56.831 87511000 0 0 0 31177000 2322000 3780100 3397600 7070600 0 5639000 9364000 12420000 6000300 6340500 0 35729 2348 32129 298515;298516;298517;298518;298519;298520;298521;298522;298523;298524 236393;236394;236395 236395 3834 3 MNDILNHK Unmodified 983.48585 0.48585006 2348 Q13867 BLMH Bleomycin hydrolase yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 24.457 24.857 2 0.013207 25721 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 72.875 47.048 22852000 0 0 0 0 0 0 0 8168400 0 0 0 9751700 4931900 0 0 35730 2348 32129 298525;298526;298527 236396;236397 236397 2 MNDQDRTSIHEAMEQQSISISK Unmodified 2547.1693 0.16934989 1590 P49736 MCM2 DNA replication licensing factor MCM2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 63.414 55.93 3;4 6.1315E-11 74864 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.477 74.087 59248000 38361000 20886000 0 0 0 0 0 0 0 0 0 0 0 0 0 35731 1590 32130 298528;298529;298530 236398;236399;236400;236401 236400 3 MNDSNSAGAGGPVK Unmodified 1303.5827 0.58266357 3689 Q92930 RAB8B Ras-related protein Rab-8B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.786 13.948 2 3.8815E-13 13084 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 110.39 102.17 59064000 0 0 0 2595500 3936400 3184600 3844600 3578200 2332000 6936400 8571100 6590200 4792300 5378400 7324500 35732 3689 32131 298531;298532;298533;298534;298535;298536;298537;298538;298539;298540;298541;298542 236402;236403;236404;236405;236406;236407;236408;236409;236410;236411;236412;236413 236411 12 MNDSNSAGAGGPVK Oxidation (M) 1319.5776 0.57757819 3689 Q92930 RAB8B Ras-related protein Rab-8B yes yes 0 1 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 2 1 1 1 1 1 1 1 9.2243 9.3823 2 5.1676E-20 6620 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 139.86 133.55 20763000 0 0 0 1949700 0 691490 1608800 0 0 1618800 5591100 3363000 2642200 1662900 1635300 35733 3689 32131 298543;298544;298545;298546;298547;298548;298549;298550;298551;298552 236414;236415;236416;236417 236415 5247 4 MNDTVTIR Acetyl (Protein N-term);Oxidation (M) 1006.4753 0.47534495 1916 P62847 RPS24 40S ribosomal protein S24 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.049 39.23 2 0.00059546 43984 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 110.31 73.289 707270000 0 0 0 53121000 61464000 47270000 55409000 40438000 48356000 65469000 65724000 84666000 69986000 52263000 63107000 35734 1916 32132 298553;298554;298555;298556;298557;298558;298559;298560;298561;298562;298563;298564 236418;236419;236420;236421;236422;236423;236424;236425;236426;236427;236428;236429;236430;236431;236432 236432 3096 15 MNDTVTIR Acetyl (Protein N-term) 990.48043 0.48043033 1916 P62847 RPS24 40S ribosomal protein S24 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 57.586 57.681 2 0.0017424 65763 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 107.01 81.113 320150000 0 0 0 19300000 28755000 23826000 22169000 23497000 21563000 39266000 0 43560000 25702000 25456000 47059000 35735 1916 32132 298565;298566;298567;298568;298569;298570;298571;298572;298573;298574;298575 236433;236434;236435;236436;236437;236438;236439;236440;236441;236442;236443;236444;236445;236446 236433 14 MNEAAEEDR Unmodified 1063.424 0.42403766 3993 Q96ST2 IWS1 Protein IWS1 homolog yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 8.1002 8.234 2 0.031803 6676 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 47.603 14.762 10029000 0 0 0 1198100 923120 0 0 0 1422200 0 2610100 0 2412800 0 1463100 35736 3993 32133 298576;298577;298578;298579;298580;298581 236447;236448 236448 2 MNEAAEEDRQLNNQK Oxidation (M) 1804.801 0.8009892 3993 Q96ST2 IWS1 Protein IWS1 homolog yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 15.648 14.916 3 4.682E-10 14772 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 91.812 85.196 178150000 6546000 22166000 0 0 0 8751100 19238000 11782000 15079000 0 37231000 0 30422000 0 26932000 35737 3993 32134 298582;298583;298584;298585;298586;298587;298588;298589;298590 236449;236450;236451;236452;236453;236454;236455;236456 236450 5471 7 MNEAAEEDRQLNNQK Unmodified 1788.8061 0.80607458 3993 Q96ST2 IWS1 Protein IWS1 homolog yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.79 2.8 2 1 16 1 2 1 1 1 2 1 1 1 2 2 2 2 20.779 20.333 2;3 6.7434E-45 26017 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 154.65 148.49 943320000 8063600 69180000 0 37041000 32507000 0 47535000 39919000 30763000 53053000 95056000 154880000 145120000 125350000 104850000 35738 3993 32134 298591;298592;298593;298594;298595;298596;298597;298598;298599;298600;298601;298602;298603;298604;298605;298606;298607;298608;298609 236457;236458;236459;236460;236461;236462;236463;236464;236465;236466;236467;236468;236469;236470;236471;236472 236458 14 MNEAFGDTK Oxidation (M) 1027.4281 0.42806041 2262 Q13263 TRIM28 Transcription intermediary factor 1-beta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.646 15.816 2 1.4121E-05 15501 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 151.44 142.2 418330000 0 0 0 24877000 21672000 28062000 27371000 21014000 24872000 36380000 58460000 46240000 46811000 43152000 39419000 35739 2262 32135 298610;298611;298612;298613;298614;298615;298616;298617;298618;298619;298620;298621 236473;236474;236475;236476;236477;236478;236479;236480;236481;236482;236483;236484;236485 236474 3690 10 MNEAFGDTK Unmodified 1011.4331 0.43314579 2262 Q13263 TRIM28 Transcription intermediary factor 1-beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 2 1 1 1 1 1 1 24.374 24.572 2 5.8026E-05 26475 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 133.12 112.64 751600000 0 0 0 38262000 43099000 56188000 45034000 36860000 30571000 62143000 78863000 84913000 84609000 65860000 125200000 35740 2262 32135 298622;298623;298624;298625;298626;298627;298628;298629;298630;298631;298632;298633;298634 236486;236487;236488;236489;236490;236491;236492;236493;236494;236495;236496;236497;236498;236499;236500;236501;236502;236503 236503 16 MNECTHLIVQEPK Unmodified 1597.7592 0.75924773 3621 Q92547 TOPBP1 DNA topoisomerase 2-binding protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 54.073 48.267 3 0.017958 62587 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 29.638 17.077 12726000 0 12726000 0 0 0 0 0 0 0 0 0 0 0 0 0 35741 3621 32136 298635 236504;236505 236505 2 MNEIMDK Unmodified 879.38302 0.38302447 4810 Q9P287 BCCIP BRCA2 and CDKN1A-interacting protein yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 26.369 22.131 2 0.011357 29114 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.28 59.284 284140000 0 284140000 0 0 0 0 0 0 0 0 0 0 0 0 0 35742 4810 32137 298636;298637 236506;236507 236507 2 MNELETEQRLSK Unmodified 1476.7242 0.72424243 4937 Q9UJC3 HOOK1 Protein Hook homolog 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 39.605 35.334 3 0.028224 44534 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 51.013 38.033 20262000 0 12937000 7324900 0 0 0 0 0 0 0 0 0 0 0 0 35743 4937 32138 298638;298639 236508;236509;236510 236510 3 MNESDAWFEEK Unmodified 1384.5605 0.56053115 428 O60749 SNX2 Sorting nexin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 61.774 61.101 2 5.2115E-09 77520 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.76 127.76 211650000 0 143110000 0 3921000 2605300 5834200 3764500 6070300 2644600 7309000 5884200 7697900 5120900 5910900 11778000 35744 428 32139 298640;298641;298642;298643;298644;298645;298646;298647;298648;298649;298650;298651;298652;298653 236511;236512;236513;236514;236515;236516;236517;236518;236519;236520;236521;236522;236523;236524 236514 14 MNESDAWFEEK Oxidation (M) 1400.5554 0.55544577 428 O60749 SNX2 Sorting nexin-2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 2 1 6 1 2 1 1 1 1 1 1 55.637 54.14 2 0.004597 68785 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.944 52.204 122880000 0 101680000 0 0 2435200 0 3940600 0 0 6004100 0 0 5295400 3519300 0 35745 428 32139 298654;298655;298656;298657;298658;298659;298660;298661;298662 236525;236526;236527;236528;236529;236530;236531 236527 544 6 MNESDIWFEEK Unmodified 1426.6075 0.60748134 2323 Q13596 SNX1 Sorting nexin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 75.253 73.275 2 0.0015434 91749 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.895 73.229 126160000 6523200 87697000 0 0 0 0 0 0 0 5548200 7394900 9605100 0 0 9387200 35746 2323 32140 298663;298664;298665;298666;298667;298668 236532;236533;236534;236535;236536;236537 236533 6 MNESDIWFEEK Oxidation (M) 1442.6024 0.60239596 2323 Q13596 SNX1 Sorting nexin-1 yes yes 0 1 0 By MS/MS 2 0 1 1 73.105 67.56 2 0.0013731 85346 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.568 84.59 66510000 0 66510000 0 0 0 0 0 0 0 0 0 0 0 0 0 35747 2323 32140 298669 236538 236538 3787 1 MNEVISLWK Oxidation (M) 1134.5743 0.57433072 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 75.471 75.522 2 0.0059249 87160 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 68.016 44.588 38223000 0 0 0 1671700 1902200 5077200 2329600 2044400 0 2906500 3946400 5588000 2700300 2970800 7085700 35748 2344 32141 298670;298671;298672;298673;298674;298675;298676;298677;298678;298679;298680 236539;236540;236541;236542;236543;236544;236545 236539 3810 7 MNFESFVK Unmodified 1000.4688 0.46880301 1474 P43246 MSH2 DNA mismatch repair protein Msh2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 75.156 74.466 2 0.01524 85571 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 69.198 6.5393 688850000 0 409840000 76653000 13290000 0 23065000 0 22668000 12249000 33033000 0 0 26033000 23248000 48774000 35749 1474 32142 298681;298682;298683;298684;298685;298686;298687;298688;298689;298690 236546;236547;236548;236549;236550;236551;236552 236546 5 MNFESFVK Oxidation (M) 1016.4637 0.46371763 1474 P43246 MSH2 DNA mismatch repair protein Msh2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS 5.77 3.93 6 1 6 2 3 2 1 1 1 1 1 1 60.687 57.618 2 0.013733 64993 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 62.464 22.818 287380000 46390000 152610000 50150000 0 5686200 9280300 6418900 0 3843200 0 6617700 0 0 0 6376200 35750 1474 32142 298691;298692;298693;298694;298695;298696;298697;298698;298699;298700;298701;298702;298703 236553;236554;236555;236556 236553 2322 4 MNGEADCPTDLEMAAPK Acetyl (Protein N-term) 1890.7798 0.77978475 1053 P17480 UBTF Nucleolar transcription factor 1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.642 76.69 2 5.3752E-05 88619 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 89.629 88.517 57577000 0 0 0 2894600 4743800 4206400 2648900 4532200 0 4857100 7056200 8770100 3830000 5917800 8120200 35751 1053 32143 298704;298705;298706;298707;298708;298709;298710;298711;298712;298713;298714 236557;236558;236559;236560;236561;236562;236563;236564;236565;236566;236567 236565 11 MNGEADCPTDLEMAAPK Acetyl (Protein N-term);2 Oxidation (M) 1922.7696 0.769614 1053 P17480 UBTF Nucleolar transcription factor 1 yes yes 1 2 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 58.509 58.65 2 3.5487E-05 66326 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 63.091 59.559 15456000 0 0 0 0 2849200 0 0 0 0 3213300 3016300 6377400 0 0 0 35752 1053 32143 298715;298716;298717;298718;298719;298720 236568;236569;236570;236571;236572 236571 1473;1474 5 MNGEADCPTDLEMAAPK Acetyl (Protein N-term);Oxidation (M) 1906.7747 0.77469938 1053 P17480 UBTF Nucleolar transcription factor 1 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 68.291 68.571 2 2.9006E-05 78696 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 66.393 57.071 23913000 0 0 0 0 0 0 2647300 0 0 0 11135000 10131000 0 0 0 35753 1053 32143 298721;298722;298723 236573;236574;236575 236575 1473;1474 3 MNGEAICSALPTIPYHK Acetyl (Protein N-term) 1942.9281 0.92810397 320 O43353 RIPK2 Receptor-interacting serine/threonine-protein kinase 2 yes yes 1 0 0 By MS/MS 2 0 1 1 89.325 84.452 2 1.7147E-09 104997 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 111.79 98.365 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35754 320 32144 298724 236576 236576 1 MNGMLLNDRK Unmodified 1190.59 0.58999756 958;2268 Q13310;P11940 PABPC4;PABPC1 Polyadenylate-binding protein 4;Polyadenylate-binding protein 1 no no 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.91 2.75 3 19 1 1 1 2 2 2 2 2 2 1 1 1 1 2 1 36.844 36.217 2;3 0.002268 39431 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 63.415 45.942 656800000 195210000 16355000 7562600 22375000 19878000 39091000 23071000 27392000 23921000 30265000 14539000 47056000 35032000 53689000 101370000 35755 2268;958 32145 298725;298726;298727;298728;298729;298730;298731;298732;298733;298734;298735;298736;298737;298738;298739;298740;298741;298742;298743;298744;298745;298746 236577;236578;236579;236580;236581;236582;236583;236584 236583 4 MNGMLLNDRK 2 Oxidation (M) 1222.5798 0.5798268 958;2268 Q13310;P11940 PABPC4;PABPC1 Polyadenylate-binding protein 4;Polyadenylate-binding protein 1 no no 0 2 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 3 21 1 2 2 2 2 1 2 3 2 3 2 2 15.733 15.478 2;3 0.00085974 14856 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 67.704 49.645 281330000 31186000 0 12512000 23385000 9969900 13449000 13575000 12420000 0 32929000 28414000 51556000 27357000 0 24579000 35756 2268;958 32145 298747;298748;298749;298750;298751;298752;298753;298754;298755;298756;298757;298758;298759;298760;298761;298762;298763;298764;298765;298766;298767;298768;298769;298770 236585;236586;236587;236588;236589;236590;236591;236592;236593;236594;236595;236596;236597;236598 236598 1241;1242 6 MNGMLLNDRK Oxidation (M) 1206.5849 0.58491218 958;2268 Q13310;P11940 PABPC4;PABPC1 Polyadenylate-binding protein 4;Polyadenylate-binding protein 1 no no 0 1 1 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.32 3.26 4 15 3 1 1 1 1 2 1 2 1 2 1 1 2 26.299 25.453 2;3 8.1436E-06 36074 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 150.17 129.65 667230000 526870000 0 1796100 0 7652700 12462000 8253600 23063000 7225500 16915000 12819000 18144000 4150500 8761000 19117000 35757 2268;958 32145 298771;298772;298773;298774;298775;298776;298777;298778;298779;298780;298781;298782;298783;298784;298785;298786;298787;298788;298789 236599;236600;236601;236602;236603;236604 236601 1241;1242 4 MNGPADGEVDYKK Acetyl (Protein N-term) 1464.6555 0.65549416 3404 Q8NBZ0 INO80E INO80 complex subunit E yes yes 1 0 1 By MS/MS 10 0 1 1 41.753 42.027 2 0.00054191 45957 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 94.297 75.517 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35758 3404 32146 298790 236605 236605 1 MNGQLDLSGK Acetyl (Protein N-term) 1103.5281 0.52810881 3654 Q92734 TFG Protein TFG yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.57 3.85 1 1 5 2 1 1 1 1 1 73.374 72.9 2 0.00093371 89022 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 91.867 77.2 33314000 20650000 0 0 0 0 0 0 0 0 3507700 4003500 0 0 5152800 0 35759 3654 32147 298791;298792;298793;298794;298795;298796;298797 236606;236607;236608;236609;236610;236611;236612;236613 236608 8 MNGQLDLSGK Acetyl (Protein N-term);Oxidation (M) 1119.523 0.52302343 3654 Q92734 TFG Protein TFG yes yes 1 1 0 By MS/MS 1 0 1 1 101.92 107.18 2 0.0071133 86934 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 64.654 37.961 9593600 9593600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35760 3654 32147 298798 236614 236614 5169 1 MNGQLNGFHEAFIEEGTFLFTSESVGEGHPDK Acetyl (Protein N-term);Oxidation (M) 3581.6045 0.60452781 1297 P31153 MAT2A S-adenosylmethionine synthase isoform type-2 yes yes 1 1 0 By MS/MS 2.5 0.5 1 1 2 97.651 91.829 3 6.3585E-105 116105 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 136.34 131.02 41817000 41817000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35761 1297 32148 298799;298800 236615;236616 236616 1913 2 MNGQYQQPTDSLNNDNK Unmodified 1965.8487 0.84866768 5060 Q9UPT9 USP22 Ubiquitin carboxyl-terminal hydrolase 22 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 35.142 35.42 2 3.6693E-82 38042 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 211.26 205.88 66529000 0 0 0 0 4320300 0 5266800 4914300 0 8770400 8604000 9236900 5377500 5321300 14717000 35762 5060 32149 298801;298802;298803;298804;298805;298806;298807;298808;298809 236617;236618;236619;236620;236621;236622;236623;236624;236625 236619 9 MNGQYQQPTDSLNNDNK Oxidation (M) 1981.8436 0.8435823 5060 Q9UPT9 USP22 Ubiquitin carboxyl-terminal hydrolase 22 yes yes 0 1 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 30.603 30.791 2 2.0188E-31 33340 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 118.48 113.2 20487000 0 0 0 0 0 3484000 2622700 0 1769300 2660100 4039800 0 5911200 0 0 35763 5060 32149 298810;298811;298812;298813;298814;298815 236626;236627;236628;236629 236629 6413 4 MNGTLDHPDQPDLDAIK Acetyl (Protein N-term);Oxidation (M) 1936.8837 0.8836562 3677 Q92879 CELF1 CUGBP Elav-like family member 1 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 67.333 67.405 2 7.659E-37 77183 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 125.53 102.29 151220000 0 0 0 9051300 8363400 11553000 13332000 0 11678000 12665000 18320000 20379000 14881000 11989000 19012000 35764 3677 32150 298816;298817;298818;298819;298820;298821;298822;298823;298824;298825;298826 236630;236631;236632;236633;236634;236635;236636;236637;236638;236639;236640 236638 5227 11 MNGTLDHPDQPDLDAIK Acetyl (Protein N-term) 1920.8887 0.88874158 3677 Q92879 CELF1 CUGBP Elav-like family member 1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 76.449 76.139 2 4.9742E-64 92770 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 202.13 156.87 225470000 0 98468000 0 4834000 5487000 7057400 7505600 10628000 7885500 12407000 15198000 10304000 10867000 10841000 23985000 35765 3677 32150 298827;298828;298829;298830;298831;298832;298833;298834;298835;298836;298837;298838;298839 236641;236642;236643;236644;236645;236646;236647;236648;236649;236650;236651;236652;236653;236654 236644 14 MNGTLDHPDQPDLDAIK Oxidation (M) 1894.8731 0.87309151 3677 Q92879 CELF1 CUGBP Elav-like family member 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 56.547 56.617 3 5.4362E-05 64338 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 68.481 58.95 94436000 0 0 0 10979000 0 10530000 11701000 11673000 9229100 8161100 21150000 0 0 11012000 0 35766 3677 32150 298840;298841;298842;298843;298844;298845;298846;298847 236655;236656;236657;236658;236659;236660 236659 5227 5 MNGTLDHPDQPDLDAIK Unmodified 1878.8782 0.87817689 3677 Q92879 CELF1 CUGBP Elav-like family member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 60.941 61.043 3 0.0007735 78215 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 63.614 47.73 119110000 0 0 0 4410100 4609700 7610800 6316600 12596000 6011300 10948000 14936000 9980400 9953600 12933000 18802000 35767 3677 32150 298848;298849;298850;298851;298852;298853;298854;298855;298856;298857;298858;298859;298860 236661;236662;236663 236661 3 MNGYISNANYSVK Unmodified 1459.6766 0.67656396 1418 P40692 MLH1 DNA mismatch repair protein Mlh1 yes yes 0 0 0 By MS/MS 2 0 1 1 54.928 49.122 2 0.0021071 63489 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.08 91.864 36117000 0 36117000 0 0 0 0 0 0 0 0 0 0 0 0 0 35768 1418 32151 298861 236664;236665 236665 2 MNHLNVLAK Acetyl (Protein N-term) 1080.575 0.57499942 1788 P56945 BCAR1 Breast cancer anti-estrogen resistance protein 1 yes yes 1 0 0 By MS/MS By MS/MS 2 0 2 1 1 75.906 67.776 2 0.0012822 89407 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 109.36 80.845 13115000 13115000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35769 1788 32152 298862;298863 236666;236667;236668 236668 3 MNHQQQQQQQK Acetyl (Protein N-term) 1466.6685 0.66845889 3702 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7.2438 6.8579 2 0 5156 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 273.47 225.6 138740000 5934000 8424100 0 6547500 4982600 11188000 7129200 7560400 8247800 10231000 18445000 8317600 9873600 10939000 20926000 35770 3702 32153 298864;298865;298866;298867;298868;298869;298870;298871;298872;298873;298874;298875;298876;298877 236669;236670;236671;236672;236673;236674;236675;236676;236677;236678;236679;236680;236681;236682 236669 14 MNHSPLK Acetyl (Protein N-term);Oxidation (M) 883.42219 0.42218717 2346 Q13835 PKP1 Plakophilin-1 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 15.727 15.77 2 0.0080435 15304 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 54.205 29.206 48620000 0 0 0 0 1707400 0 2908200 38305000 0 0 0 0 5699600 0 0 35771 2346 32154 298878;298879;298880;298881 236683;236684 236683 3818 2 MNHSPLK Acetyl (Protein N-term) 867.42727 0.42727255 2346 Q13835 PKP1 Plakophilin-1 yes yes 1 0 0 By matching By MS/MS By MS/MS By matching By matching 10 0 5 1 1 1 1 1 31.961 32.163 2 0.028188 34918 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 46.426 12.687 53686000 0 0 0 13614000 0 0 3354500 32848000 0 0 1245600 0 0 0 2624400 35772 2346 32154 298882;298883;298884;298885;298886 236685 236685 1 MNHTVQTFFSPVNSGQPPNYEMLK Acetyl (Protein N-term);2 Oxidation (M) 2839.2946 0.2945504 2058 Q01628;C9JQL5 IFITM3 Interferon-induced transmembrane protein 3;Putative dispanin subfamily A member 2d yes no 1 2 0 By matching By MS/MS 10 0 2 1 1 83.52 83.449 3 4.3217E-07 96713 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 48.641 42.065 7011200 0 0 0 0 1336700 0 0 0 0 5674400 0 0 0 0 0 35773 2058 32155 298887;298888 236686 236686 3345;3346 1 MNIELTQLK Unmodified 1088.59 0.58998078 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.019 71.093 2 0.003237 80954 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.709 65.786 195350000 0 0 0 7778400 13414000 15679000 14307000 15927000 12217000 17975000 17687000 23022000 18750000 18614000 19979000 35774 3023 32156 298889;298890;298891;298892;298893;298894;298895;298896;298897;298898;298899;298900 236687;236688;236689;236690;236691;236692;236693;236694;236695;236696;236697;236698 236690 12 MNIELTQLK Oxidation (M) 1104.5849 0.5848954 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 2 2 1 1 2 2 56.763 56.786 2 0.0034678 63598 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 78.516 38.248 46388000 0 0 0 3087900 6655100 0 6930300 0 9325900 6122700 0 10587000 0 3679900 0 35775 3023 32156 298901;298902;298903;298904;298905;298906;298907;298908;298909;298910;298911;298912;298913;298914 236699;236700;236701;236702;236703;236704;236705;236706;236707;236708;236709;236710;236711 236709 4633 12 MNILAPVRR Acetyl (Protein N-term) 1110.6332 0.633183 4265 Q9BZG1 RAB34 Ras-related protein Rab-34 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 77.902 78.033 2 0.0028518 90126 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 91.041 65.304 87446000 0 0 0 0 0 10484000 0 12132000 8135800 9064500 10529000 13937000 15266000 7896500 0 35776 4265 32157 298915;298916;298917;298918;298919;298920;298921;298922;298923 236712;236713;236714;236715;236716;236717;236718;236719;236720 236712 9 MNILAPVRR Acetyl (Protein N-term);Oxidation (M) 1126.6281 0.62809762 4265 Q9BZG1 RAB34 Ras-related protein Rab-34 yes yes 1 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 59.055 59.162 2 0.0019239 67685 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 81.297 63.261 143990000 0 0 0 8679700 7689300 11463000 13958000 0 9922600 15735000 18394000 18154000 13968000 12261000 13765000 35777 4265 32157 298924;298925;298926;298927;298928;298929;298930;298931;298932;298933;298934 236721;236722;236723;236724;236725;236726;236727;236728;236729;236730;236731 236729 5725 7 MNIMDFNVK Acetyl (Protein N-term);Oxidation (M) 1168.5257 0.52566596 5139 Q9Y371 SH3GLB1 Endophilin-B1 yes yes 1 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.26 2.4 1 1 21 1 1 1 2 2 2 2 2 2 1 2 2 1 2 83.112 83.204 2 0.00068542 94755 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 79.906 71.488 147180000 5880600 27151000 0 1678700 8072100 7644500 7498900 14184000 6842200 14371000 8447300 15609000 11438000 4527200 13840000 35778 5139 32158 298935;298936;298937;298938;298939;298940;298941;298942;298943;298944;298945;298946;298947;298948;298949;298950;298951;298952;298953;298954;298955;298956;298957 236732;236733;236734;236735;236736;236737;236738;236739;236740;236741;236742;236743;236744;236745;236746;236747 236740 6526;6527 14 MNIMDFNVK Acetyl (Protein N-term);2 Oxidation (M) 1184.5206 0.52058059 5139 Q9Y371 SH3GLB1 Endophilin-B1 yes yes 1 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 65.804 65.836 2 0.0047126 75609 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 57.177 44.141 38341000 0 0 0 5060700 0 7396900 7560400 0 0 0 7446900 10876000 0 0 0 35779 5139 32158 298958;298959;298960;298961;298962 236748;236749;236750;236751;236752 236748 6526;6527 3 MNIMDFNVK Acetyl (Protein N-term) 1152.5308 0.53075134 5139 Q9Y371 SH3GLB1 Endophilin-B1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 91.968 91.632 2 0.0032297 111385 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.741 77.756 79602000 0 52333000 0 746350 1695300 0 1161300 3106000 1015400 3122500 2841900 2668000 2727000 2377800 5807900 35780 5139 32158 298963;298964;298965;298966;298967;298968;298969;298970;298971;298972;298973;298974 236753;236754 236753 2 MNLASEPQEVLHIGSAHNR Unmodified 2102.0327 0.032720472 119 O00151 PDLIM1 PDZ and LIM domain protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 70.6 71.035 3 0.0001582 81024 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.253 49.044 13573000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13573000 35781 119 32159 298975 236755 236755 1 MNLASEPQEVLHIGSAHNR Oxidation (M) 2118.0276 0.027635094 119 O00151 PDLIM1 PDZ and LIM domain protein 1 yes yes 0 1 0 By matching By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 62.555 62.869 3 4.1193E-07 71647 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 69.763 59.975 57398000 0 0 0 0 0 4111400 0 0 0 0 8560200 10510000 0 10699000 23516000 35782 119 32159 298976;298977;298978;298979;298980 236756;236757 236757 154 1 MNLEVIYGDTDSIMINTNSTNLEEVFK Oxidation (M) 3105.4522 0.45223283 895 P09884 POLA1 DNA polymerase alpha catalytic subunit yes yes 0 1 0 By MS/MS 2 0 1 1 97.706 89.576 3 9.0564E-11 115665 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.31 63.778 11417000 11417000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35783 895 32160 298981 236758 236758 1156 1 MNLEVIYGDTDSIMINTNSTNLEEVFK Unmodified 3089.4573 0.45731821 895 P09884 POLA1 DNA polymerase alpha catalytic subunit yes yes 0 0 0 By MS/MS 2 0 1 1 98.775 90.644 3 3.8386E-29 116944 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.952 76.847 15750000 15750000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35784 895 32160 298982 236759 236759 1 MNLFNLDR Acetyl (Protein N-term);Oxidation (M) 1079.507 0.50697943 4402 Q9H4L7 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 yes yes 1 1 0 By matching By MS/MS By matching By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 82.366 82.485 2 0.0022565 94615 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 66.073 50.813 22751000 0 0 0 0 0 3013700 2184800 3256000 0 0 0 4160200 4169400 5967000 0 35785 4402 32161 298983;298984;298985;298986;298987;298988 236760 236760 5866 1 MNLGVGAYRDDNGK Oxidation (M) 1524.6991 0.69909031 730 P00505 GOT2 Aspartate aminotransferase, mitochondrial yes yes 0 1 1 By MS/MS 2 0 1 1 37.58 31.083 3 0.0094848 43374 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.825 34.555 14376000 14376000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35786 730 32162 298989 236761 236761 881 1 MNLGVGAYRDDNGK Unmodified 1508.7042 0.70417569 730 P00505 GOT2 Aspartate aminotransferase, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 50.096 44.148 3 0.0057379 60847 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.756 75.282 55327000 50394000 0 4932200 0 0 0 0 0 0 0 0 0 0 0 0 35787 730 32162 298990;298991 236762 236762 0 MNLLNQQIQEELSR Oxidation (M) 1730.8621 0.8621329 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 1 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 77.889 77.987 2 1.6809E-20 90087 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 143.17 109.3 48100000 0 0 0 0 3316500 4715700 4019200 0 3695200 6974100 4907000 5502200 3852000 3584900 7533700 35788 2446 32163 298992;298993;298994;298995;298996;298997;298998;298999;299000;299001 236763;236764;236765;236766;236767 236763 4012 5 MNLLPNIESPVTR Acetyl (Protein N-term);Oxidation (M) 1540.7919 0.79192806 1066 P17980 PSMC3 26S protease regulatory subunit 6A yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 87.684 87.785 2 9.3738E-05 101774 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 72.006 56.115 43893000 0 0 0 0 5519700 4913100 1810800 0 1127900 8706700 6645200 9845600 0 1775500 3548900 35789 1066 32164 299002;299003;299004;299005;299006;299007;299008;299009;299010 236768;236769;236770;236771;236772;236773;236774;236775;236776 236769 1506 9 MNLLPNIESPVTRQEK Acetyl (Protein N-term);Oxidation (M) 1925.9881 0.98806169 1066 P17980 PSMC3 26S protease regulatory subunit 6A yes yes 1 1 1 By MS/MS By MS/MS 10 0 2 1 1 81.467 81.642 2 0.00014814 94450 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 68.44 55.46 24325000 0 0 0 0 0 0 0 0 0 0 11393000 12932000 0 0 0 35790 1066 32165 299011;299012 236777;236778 236777 1506 2 MNLNDFISMDPK Unmodified 1423.6476 0.64757201 3864 Q96HA8 WDYHV1 Protein N-terminal glutamine amidohydrolase yes yes 0 0 0 By MS/MS 2 0 1 1 90.526 85.629 2 2.9676E-05 106416 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.79 89.462 27969000 0 27969000 0 0 0 0 0 0 0 0 0 0 0 0 0 35791 3864 32166 299013 236779 236779 1 MNLNDFISMDPK Oxidation (M) 1439.6425 0.64248664 3864 Q96HA8 WDYHV1 Protein N-terminal glutamine amidohydrolase yes yes 0 1 0 By MS/MS 2 0 1 1 83.182 78.461 2 0.029413 97601 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 55.353 39.02 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35792 3864 32166 299014 236780 236780 1 MNLPGEVTFLPLNK Oxidation (M) 1587.8331 0.8330646 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 86.224 85.194 2 1.1983E-14 106352 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.28 105.7 257410000 10769000 63753000 0 5955200 9171500 17913000 10889000 12370000 11732000 24577000 16913000 21562000 11652000 15702000 24448000 35793 5071 32167 299015;299016;299017;299018;299019;299020;299021;299022;299023;299024;299025;299026;299027;299028;299029 236781;236782;236783;236784;236785;236786;236787;236788;236789;236790;236791;236792;236793;236794 236784 6446 14 MNLPGEVTFLPLNK Unmodified 1571.8381 0.83814998 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 3 9 1 1 1 1 1 1 1 1 1 1 1 1 90.427 89.87 2 4.3571E-06 112573 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 115.18 81.309 99732000 0 66456000 949970 0 0 1773300 0 2015200 1159300 4474200 1962600 3800900 1028300 2551900 13560000 35794 5071 32167 299030;299031;299032;299033;299034;299035;299036;299037;299038;299039;299040;299041 236795;236796;236797;236798;236799;236800;236801;236802 236799 8 MNLSAIQDR Unmodified 1046.5179 0.51787847 3759 Q96BM9 ARL8A ADP-ribosylation factor-like protein 8A no no 0 0 0 By matching By MS/MS By matching By matching By MS/MS By matching By matching By matching 10 0 8 1 1 1 1 1 1 1 1 48.934 49.116 2 0.0063245 56011 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 75.378 41.582 73880000 0 0 0 5768900 6055700 0 0 9340500 0 0 11121000 11166000 9443400 7765300 13220000 35795 3759 32168 299042;299043;299044;299045;299046;299047;299048;299049 236803;236804 236804 2 MNLSDVELIPLPLEPQVK Oxidation (M) 2050.102 0.10202882 3422 Q8NEB9 PIK3C3 Phosphatidylinositol 3-kinase catalytic subunit type 3 yes yes 0 1 0 By MS/MS By MS/MS 6 4 1 1 1 1 96.809 94.515 2 4.8437E-76 115821 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 182.72 169.3 30931000 0 29558000 0 0 0 0 0 0 0 0 0 0 0 0 1373200 35796 3422 32169 299050;299051 236805;236806 236805 4970 2 MNLSEEVDLEDYVARPDK Oxidation (M) 2137.9838 0.98376417 1482 P43686 PSMC4 26S protease regulatory subunit 6B yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 78.051 76.903 2;3 6.2879E-69 95629 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 169.17 147.61 184840000 66963000 18641000 0 0 0 0 0 5182400 6246100 2902700 18811000 34336000 4783200 6587700 20384000 35797 1482 32170 299052;299053;299054;299055;299056;299057;299058;299059;299060;299061 236807;236808;236809;236810;236811 236807 2330 4 MNLSEEVDLEDYVARPDK Unmodified 2121.9888 0.98884955 1482 P43686 PSMC4 26S protease regulatory subunit 6B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 84.753 80.3 3 2.9275E-27 101550 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 124.18 118.6 407720000 200220000 204190000 3311000 0 0 0 0 0 0 0 0 0 0 0 0 35798 1482 32170 299062;299063;299064;299065;299066 236812;236813;236814;236815;236816;236817 236816 6 MNLYSLCK Unmodified 1027.4831 0.48307287 3508 Q8TDX7 NEK7 Serine/threonine-protein kinase Nek7 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 68.068 60.963 2 0.043506 80928 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.198 44.566 64087000 23464000 40624000 0 0 0 0 0 0 0 0 0 0 0 0 0 35799 3508 32171 299067;299068 236818 236818 1 MNMLAGPQPYGGSK Unmodified 1449.6745 0.67445547 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 59.24 57.799 2 0.0010634 66102 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 78.342 61.504 161810000 15547000 42520000 0 7551600 0 0 0 9527000 0 14192000 0 25960000 10577000 14555000 21379000 35800 4285 32172 299069;299070;299071;299072;299073;299074;299075;299076;299077;299078 236819;236820;236821;236822;236823;236824;236825;236826 236823 8 MNMLAGPQPYGGSK Oxidation (M) 1465.6694 0.66937009 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 1 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 7 3.87 3 5 1 2 1 1 1 1 1 43.755 42.696 2 0.0016752 60582 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.184 71.303 28684000 0 14936000 0 0 1789500 0 2259800 0 0 3839700 0 0 0 0 5858800 35801 4285 32172 299079;299080;299081;299082;299083;299084;299085;299086 236827;236828;236829;236830;236831 236828 5746;5747 5 MNNHVSSK Acetyl (Protein N-term) 957.43381 0.43381449 670 O95573 ACSL3 Long-chain-fatty-acid--CoA ligase 3 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 10.58 10.713 2 0.012616 8127 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 50.805 40.498 46730000 0 0 0 3003800 3268300 5190700 4020200 3877500 3942300 0 4405500 7292600 0 5146600 6582800 35802 670 32173 299087;299088;299089;299090;299091;299092;299093;299094;299095;299096 236832;236833;236834;236835;236836;236837;236838 236836 7 MNNPSETSKPSMESGDGNTGTQTNGLDFQK Unmodified 3171.3721 0.37208503 1007 P14859 POU2F1 POU domain, class 2, transcription factor 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 53.206 52.972 3 3.5255E-08 59952 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 37.344 36.473 14791000 0 0 0 2960900 3481400 0 3066800 5281900 0 0 0 0 0 0 0 35803 1007 32174 299097;299098;299099;299100 236839;236840 236840 2 MNNSGADEIGK Acetyl (Protein N-term);Oxidation (M) 1192.503 0.50301627 3818 Q96EP5 DAZAP1 DAZ-associated protein 1 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 8.45 3.29 1 1 9 2 1 1 1 1 1 1 1 1 1 27.49 27.729 2 4.0277E-07 54702 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 123.63 114.71 138650000 31144000 0 0 0 3687300 4315400 6605600 5186200 0 0 11811000 15884000 9964800 16011000 34044000 35804 3818 32175 299101;299102;299103;299104;299105;299106;299107;299108;299109;299110;299111 236841;236842;236843;236844;236845;236846;236847;236848;236849;236850;236851;236852;236853;236854;236855 236848 5345 12 MNNSGADEIGK Acetyl (Protein N-term) 1176.5081 0.50810164 3818 Q96EP5 DAZAP1 DAZ-associated protein 1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 39.036 38.611 2 6.5725E-05 42270 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.21 86.902 146390000 8635600 0 0 5113000 4874100 0 5721600 5568300 0 15109000 14225000 14818000 6230000 15897000 50193000 35805 3818 32175 299112;299113;299114;299115;299116;299117;299118;299119;299120;299121;299122 236856;236857;236858;236859;236860;236861;236862;236863;236864;236865 236858 10 MNNVNVVYTPWSNLK Oxidation (M) 1793.8771 0.87705468 3185 Q86WR0 CCDC25 Coiled-coil domain-containing protein 25 yes yes 0 1 0 By MS/MS 2 0 1 1 86.549 78.419 2 0.011363 102171 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.659 39.552 9809700 9809700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35806 3185 32176 299123 236866 236866 4811 1 MNNVNVVYTPWSNLK Unmodified 1777.8821 0.88214006 3185 Q86WR0 CCDC25 Coiled-coil domain-containing protein 25 yes yes 0 0 0 By MS/MS 2 0 1 1 88.68 80.549 2 0.00026202 104756 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.191 80.529 14439000 14439000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35807 3185 32176 299124 236867 236867 1 MNPAAEAEFNILLATDSYK Acetyl (Protein N-term);Oxidation (M) 2155.0143 0.01433602 1481 P43490 NAMPT Nicotinamide phosphoribosyltransferase yes yes 1 1 0 By MS/MS By MS/MS 2.2 0.748 1 2 2 3 2 100.44 97.542 2;3 2.8733E-77 117017 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 161.84 147.58 115650000 46993000 68660000 0 0 0 0 0 0 0 0 0 0 0 0 0 35808 1481 32177 299125;299126;299127;299128;299129 236868;236869;236870;236871;236872 236869 2326 5 MNPAAEAEFNILLATDSYK Acetyl (Protein N-term) 2139.0194 0.019421398 1481 P43490 NAMPT Nicotinamide phosphoribosyltransferase yes yes 1 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 3 1 100.98 95.741 2;3 2.2297E-181 119200 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 238.67 231.3 206040000 20477000 185560000 0 0 0 0 0 0 0 0 0 0 0 0 0 35809 1481 32177 299130;299131;299132;299133;299134 236873;236874;236875;236876;236877;236878 236873 5 MNPESSIFIEDYLK Acetyl (Protein N-term);Oxidation (M) 1742.8073 0.80730336 4094 Q9BQE5 APOL2 Apolipoprotein L2 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.45 3.29 1 1 9 1 1 1 1 1 1 1 1 1 1 1 95.534 95.654 2 2.924E-24 91492 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 131.37 116.95 134130000 11432000 28888000 0 0 8736200 5129400 0 10907000 6521000 20992000 13841000 13803000 5279800 8595700 0 35810 4094 32178 299135;299136;299137;299138;299139;299140;299141;299142;299143;299144;299145 236879;236880;236881;236882;236883;236884;236885;236886;236887;236888;236889;236890;236891;236892 236884 5599 14 MNPESSIFIEDYLK Acetyl (Protein N-term) 1726.8124 0.81238874 4094 Q9BQE5 APOL2 Apolipoprotein L2 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 98.185 96.722 2 9.1668E-31 116911 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145.91 127.86 80418000 0 77499000 0 0 0 0 0 0 0 0 1277900 0 0 0 1641400 35811 4094 32178 299146;299147;299148 236893;236894 236893 2 MNPEYDYLFK Acetyl (Protein N-term);Oxidation (M) 1376.5959 0.59585402 4338 Q9H0U4 RAB1B Ras-related protein Rab-1B yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.3 1 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 85.521 85.37 2 0.00025157 96719 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 99.802 94.32 901810000 72373000 66824000 0 24038000 0 49142000 81646000 65882000 54467000 84400000 87236000 102660000 66134000 61580000 85429000 35812 4338 32179 299149;299150;299151;299152;299153;299154;299155;299156;299157;299158;299159;299160;299161;299162 236895;236896;236897;236898;236899;236900;236901;236902;236903;236904;236905;236906;236907;236908;236909;236910;236911;236912;236913 236902 5800 19 MNPEYDYLFK Acetyl (Protein N-term) 1360.6009 0.6009394 4338 Q9H0U4 RAB1B Ras-related protein Rab-1B yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.83 1 2 7 2 1 1 1 1 1 1 1 1 92.356 91.639 2 0.0025499 104245 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 57.598 46.108 323410000 65746000 164000000 0 0 8818300 0 9191800 0 8654000 21312000 0 17467000 11585000 16629000 0 35813 4338 32179 299163;299164;299165;299166;299167;299168;299169;299170;299171;299172 236914;236915;236916;236917;236918;236919;236920;236921;236922;236923;236924;236925;236926 236917 13 MNPGDLQWMTAGR Oxidation (M) 1491.6599 0.65986803 172 O00625 PIR Pirin yes yes 0 1 0 By MS/MS 10 0 1 1 64.434 64.986 2 0.0073559 73736 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.843 26.269 7462800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7462800 35814 172 32180 299173 236927 236927 242 1 MNPGDLQWMTAGR Unmodified 1475.665 0.66495341 172 O00625 PIR Pirin yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 78.182 78.372 2 0.00066357 90072 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.951 67.848 32254000 0 0 0 0 0 0 0 0 0 0 0 0 0 3882000 28372000 35815 172 32180 299174;299175 236928 236928 1 MNPIVVVHGGGAGPISK Acetyl (Protein N-term) 1673.8923 0.89231081 3044 Q7L266 ASRGL1 Isoaspartyl peptidase/L-asparaginase;Isoaspartyl peptidase/L-asparaginase alpha chain;Isoaspartyl peptidase/L-asparaginase beta chain yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 81.364 80.259 2 2.106E-14 92815 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 99.844 93.896 71570000 7206600 35805000 0 1126000 0 2683800 1418400 3282000 1983700 3184300 4453000 0 2707700 0 7719700 35816 3044 32181 299176;299177;299178;299179;299180;299181;299182;299183;299184;299185;299186 236929;236930;236931;236932;236933;236934;236935;236936;236937;236938 236932 10 MNPIVVVHGGGAGPISK Acetyl (Protein N-term);Oxidation (M) 1689.8872 0.88722543 3044 Q7L266 ASRGL1 Isoaspartyl peptidase/L-asparaginase;Isoaspartyl peptidase/L-asparaginase alpha chain;Isoaspartyl peptidase/L-asparaginase beta chain yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 71.657 70.026 2 3.028E-09 87857 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.43 88.231 60607000 5070100 33165000 0 2381400 2702400 0 3312200 0 0 0 0 4842000 2834800 0 6299000 35817 3044 32181 299187;299188;299189;299190;299191;299192;299193;299194 236939;236940;236941;236942;236943;236944;236945 236940 4668 6 MNPNCARCGK Acetyl (Protein N-term);Oxidation (M) 1264.5111 0.51109531 2452 Q14847 LASP1 LIM and SH3 domain protein 1 yes yes 1 1 1 By MS/MS 2 0 1 1 9.1285 5.8737 2 0.0019615 8558 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.248 67.145 5440600 0 5440600 0 0 0 0 0 0 0 0 0 0 0 0 0 35818 2452 32182 299195 236946 236946 4030 1 MNPNCARCGK Unmodified 1206.5056 0.505616 2452 Q14847 LASP1 LIM and SH3 domain protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 8.1564 4.6413 3 0.02142 8074 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.327 33.12 15139000 15139000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35819 2452 32182 299196 236947;236948 236948 2 MNPQSAFFQGK Oxidation (M) 1269.5812 0.58120701 1136 P22307 SCP2 Non-specific lipid-transfer protein yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 53.769 48.422 2 0.021748 62493 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 55.908 39.706 17083000 0 17083000 0 0 0 0 0 0 0 0 0 0 0 0 0 35820 1136 32183 299197;299198 236949 236949 1 MNPQSAFFQGK Unmodified 1253.5863 0.58629239 1136 P22307 SCP2 Non-specific lipid-transfer protein yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 67.24 60.134 2 0.00023545 77182 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.41 98.182 59092000 34332000 24760000 0 0 0 0 0 0 0 0 0 0 0 0 0 35821 1136 32183 299199;299200 236950;236951 236950 2 MNPSAPSYPMASLYVGDLHPDVTEAMLYEK Acetyl (Protein N-term);3 Oxidation (M) 3415.5298 0.52983123 958 P11940 PABPC1 Polyadenylate-binding protein 1 yes yes 1 3 0 By MS/MS 2 0 1 1 92.041 87.131 3 4.9787E-14 108229 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.294 60.514 41562000 0 41562000 0 0 0 0 0 0 0 0 0 0 0 0 0 35822 958 32184 299201 236952 236952 1243;1244;1245 1 MNPSAPSYPMASLYVGDLHPDVTEAMLYEK Acetyl (Protein N-term);2 Oxidation (M) 3399.5349 0.53491661 958 P11940 PABPC1 Polyadenylate-binding protein 1 yes yes 1 2 0 By MS/MS By MS/MS 2.2 0.4 4 1 4 1 94.638 90.578 3 1.1874E-20 113490 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.162 73.88 98120000 0 96461000 1659000 0 0 0 0 0 0 0 0 0 0 0 0 35823 958 32184 299202;299203;299204;299205;299206 236953;236954;236955 236955 1243;1244;1245 3 MNPSAPSYPMASLYVGDLHPDVTEAMLYEK Acetyl (Protein N-term);Oxidation (M) 3383.54 0.54000198 958 P11940 PABPC1 Polyadenylate-binding protein 1 yes yes 1 1 0 By MS/MS By MS/MS 2 0 3 2 1 96.954 92.941 3 1.5933E-26 114267 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.697 79.374 132530000 0 131710000 823370 0 0 0 0 0 0 0 0 0 0 0 0 35824 958 32184 299207;299208;299209 236956;236957;236958;236959 236956 1243;1244;1245 4 MNPSAPSYPMASLYVGDLHPDVTEAMLYEK Acetyl (Protein N-term) 3367.5451 0.54508736 958 P11940 PABPC1 Polyadenylate-binding protein 1 yes yes 1 0 0 By MS/MS 2 0 1 1 98.885 94.15 3 1.4081E-15 116308 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.674 67.643 125390000 0 125390000 0 0 0 0 0 0 0 0 0 0 0 0 0 35825 958 32184 299210 236960 236960 1 MNPVYSPGSSGVPYANAK Acetyl (Protein N-term);Oxidation (M) 1895.8724 0.87236323 8 A1KXE4 FAM168B Myelin-associated neurite-outgrowth inhibitor yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.354 69.428 2 1.665E-20 79670 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 100.19 95.338 296960000 0 0 0 13943000 26107000 18705000 27184000 16687000 23166000 30745000 27379000 39363000 29158000 22257000 22266000 35826 8 32185 299211;299212;299213;299214;299215;299216;299217;299218;299219;299220;299221;299222 236961;236962;236963;236964;236965;236966;236967;236968;236969;236970;236971;236972;236973 236971 11 13 MNPVYSPGSSGVPYANAK Acetyl (Protein N-term) 1879.8774 0.87744861 8 A1KXE4 FAM168B Myelin-associated neurite-outgrowth inhibitor yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 77.62 77.634 2 3.5739E-30 89294 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 150.49 136.33 139320000 0 0 0 8011200 16485000 0 15146000 18075000 0 0 0 22238000 17843000 0 41521000 35827 8 32185 299223;299224;299225;299226;299227;299228;299229 236974;236975;236976;236977;236978;236979;236980 236975 7 MNPVYSPVQPGAPYGNPK Acetyl (Protein N-term) 1956.9404 0.94038322 3626 Q92567 FAM168A Protein FAM168A yes yes 1 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 80.251 80.353 2 8.7924E-05 92803 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 75.695 68.814 27290000 0 0 0 0 2462700 0 0 3243900 2280300 4577700 3511300 0 0 0 11214000 35828 3626 32186 299230;299231;299232;299233;299234;299235 236981;236982;236983;236984 236983 4 MNPVYSPVQPGAPYGNPK Acetyl (Protein N-term);Oxidation (M) 1972.9353 0.93529784 3626 Q92567 FAM168A Protein FAM168A yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 73.29 73.121 2 1.6608E-06 84137 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 73.435 68.051 24218000 0 0 0 5190300 4979600 0 5786000 0 0 0 0 0 0 8261800 0 35829 3626 32186 299236;299237;299238;299239 236985;236986;236987 236986 5123 3 MNQLTQELFSLK Unmodified 1450.749 0.74900062 4077 Q99996 AKAP9 A-kinase anchor protein 9 yes yes 0 0 0 By MS/MS 2 0 1 1 93.279 85.149 2 2.8393E-05 110268 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 105.86 93.816 10260000 10260000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35830 4077 32187 299240 236988 236988 1 MNQVEDEVFEEFCR Oxidation (M) 1846.7502 0.75019918 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 1 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 82.624 82.696 2 0.00013774 95778 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 80.979 76.806 16679000 0 0 0 0 775080 2550700 921240 0 0 3568100 3138300 0 0 0 5725700 35831 2431 32188 299241;299242;299243;299244;299245;299246 236989;236990;236991;236992;236993 236991 3996 4 MNQVEDEVFEEFCREIGVR Unmodified 2385.0729 0.072930307 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 1 By MS/MS 2 0 1 1 97.962 89.831 3 9.6112E-05 115971 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.716 60.849 10966000 10966000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35832 2431 32189 299247 236994 236994 1 MNREGAPGK Acetyl (Protein N-term);Oxidation (M) 1016.4709 0.47092828 4623 Q9NSA3 CTNNBIP1 Beta-catenin-interacting protein 1 yes yes 1 1 1 By MS/MS 2.5 0.5 1 1 2 7.4408 4.1401 2 0.017269 6277 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 47.869 32.43 10498000 0 10498000 0 0 0 0 0 0 0 0 0 0 0 0 0 35833 4623 32190 299248;299249 236995 236995 6019 1 MNREGAPGK Acetyl (Protein N-term) 1000.476 0.47601366 4623 Q9NSA3 CTNNBIP1 Beta-catenin-interacting protein 1 yes yes 1 0 1 By MS/MS 2 0 1 1 16.656 13.282 2 0.045675 17308 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 51.346 8.0995 14430000 0 14430000 0 0 0 0 0 0 0 0 0 0 0 0 0 35834 4623 32190 299250 236996 236996 1 MNRFTVAELK Unmodified 1207.6383 0.63832796 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.126 52.273 3 0.0021837 58786 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 84.507 67.277 210420000 0 0 0 7523900 5887700 18203000 13973000 14956000 19029000 15570000 20571000 28120000 12495000 15918000 38173000 35835 2290 32191 299251;299252;299253;299254;299255;299256;299257;299258;299259;299260;299261;299262 236997;236998;236999;237000;237001;237002;237003;237004 237002 8 MNRFTVAELK Oxidation (M) 1223.6332 0.63324258 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 46.979 47.087 3 0.0033592 52913 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 57.174 47.22 99355000 0 0 0 12977000 0 0 19119000 0 0 18559000 17194000 0 17435000 14071000 0 35836 2290 32191 299263;299264;299265;299266;299267;299268 237005;237006;237007 237007 3742 1 MNRGINDSK Unmodified 1033.4975 0.49747738 5276;5277 Q9Y6D5;Q9Y6D6 ARFGEF2;ARFGEF1 Brefeldin A-inhibited guanine nucleotide-exchange protein 2;Brefeldin A-inhibited guanine nucleotide-exchange protein 1 no no 0 0 1 By MS/MS By matching By matching 2 0 3 1 1 1 7.0622 4.0703 2 0.010979 7608 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 118.41 64.855 83606000 73001000 8495300 2109700 0 0 0 0 0 0 0 0 0 0 0 0 35837 5276;5277 32192 299269;299270;299271 237008 237008 1 MNRPAPVEISYENMR Acetyl (Protein N-term);2 Oxidation (M) 1879.8557 0.85566731 2218 Q12974 PTP4A2 Protein tyrosine phosphatase type IVA 2 yes yes 1 2 1 By MS/MS 10 0 1 1 56.457 56.51 3 0.0011143 64067 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 40.801 35.507 13361000 0 0 0 0 0 13361000 0 0 0 0 0 0 0 0 0 35838 2218 32193 299272 237009 237009 3607;3608 1 MNRPAPVEISYENMR Acetyl (Protein N-term);Oxidation (M) 1863.8608 0.86075269 2218 Q12974 PTP4A2 Protein tyrosine phosphatase type IVA 2 yes yes 1 1 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 67.814 67.819 2 0.0022357 77092 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 43.628 36.969 35622000 0 0 0 0 6354600 0 7756100 10339000 0 0 0 0 0 11173000 0 35839 2218 32193 299273;299274;299275;299276 237010 237010 3607;3608 1 MNRPAPVEVTYK Oxidation (M) 1419.718 0.71803484 3710 Q93096 PTP4A1 Protein tyrosine phosphatase type IVA 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 35.422 35.547 3 1.4051E-05 39296 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 90.731 80.943 260320000 0 0 0 0 31045000 28394000 41570000 0 0 35532000 33328000 0 64257000 26196000 0 35840 3710 32194 299277;299278;299279;299280;299281;299282;299283 237011;237012;237013;237014;237015;237016;237017 237016 5290 5 MNRPAPVEVTYK Unmodified 1403.7231 0.72312022 3710 Q93096 PTP4A1 Protein tyrosine phosphatase type IVA 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 41.401 41.579 2;3 1.5327E-05 46312 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 102.66 88.982 665890000 0 0 0 27869000 37649000 46960000 48909000 52457000 41635000 69008000 70059000 77419000 63406000 59605000 70912000 35841 3710 32194 299284;299285;299286;299287;299288;299289;299290;299291;299292;299293;299294;299295;299296;299297;299298;299299;299300;299301;299302;299303;299304;299305;299306;299307 237018;237019;237020;237021;237022;237023;237024;237025;237026;237027;237028;237029;237030;237031;237032 237024 15 MNSDRVPDVVLIK Unmodified 1484.8021 0.80209882 3790 Q96D46 NMD3 60S ribosomal export protein NMD3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.12 3.72 2 1 5 1 1 1 1 1 1 1 1 71.297 69.593 3 0.00051882 86830 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 91.62 69.422 109220000 18398000 4874800 21446000 0 0 16472000 8739800 0 0 14251000 0 10030000 0 0 15013000 35842 3790 32195 299308;299309;299310;299311;299312;299313;299314;299315 237033;237034;237035;237036;237037;237038 237038 6 MNSDRVPDVVLIK Oxidation (M) 1500.797 0.79701344 3790 Q96D46 NMD3 60S ribosomal export protein NMD3 yes yes 0 1 1 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 71.149 67.099 3 0.0027582 82730 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 91.62 70.957 62176000 0 13129000 49046000 0 0 0 0 0 0 0 0 0 0 0 0 35843 3790 32195 299316;299317 237039;237040;237041 237041 5332 2 MNSIVYQK Oxidation (M) 997.49027 0.49026674 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 22.214 22.272 2 0.018825 23126 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 56.659 28.405 66232000 0 0 0 5591000 7726600 8900000 0 0 11555000 15162000 17296000 0 0 0 0 35844 5216 32196 299318;299319;299320;299321;299322;299323 237042;237043;237044;237045;237046 237043 6623 3 MNSIVYQK Unmodified 981.49535 0.49535211 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 31.476 31.724 2 0.0063466 34494 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 101.64 58.643 189370000 0 0 0 0 15487000 15183000 13866000 13754000 0 19900000 20010000 27719000 16427000 15738000 31288000 35845 5216 32196 299324;299325;299326;299327;299328;299329;299330;299331;299332;299333 237047;237048;237049;237050;237051;237052;237053;237054;237055 237053 3 MNSLEMTPAVR 2 Oxidation (M) 1279.5901 0.59005713 889 P09601 HMOX1 Heme oxygenase 1 yes yes 0 2 0 By MS/MS 10 0 1 1 35.582 35.129 2 0.0046633 39234 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 45.598 32.971 2113100 0 0 0 2113100 0 0 0 0 0 0 0 0 0 0 0 35846 889 32197 299334 237056 237056 1141;1142 1 MNSLPAER Oxidation (M) 932.43857 0.43856552 1280 P30419 NMT1 Glycylpeptide N-tetradecanoyltransferase 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 17.45 17.864 2 0.012849 16457 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.565 37.456 98343000 0 0 0 0 0 0 0 0 0 14956000 16015000 16394000 17028000 0 33950000 35847 1280 32198 299335;299336;299337;299338;299339 237057;237058;237059;237060 237057 1883 4 MNSLPAERIQEIQK Unmodified 1655.8665 0.86648999 1280 P30419 NMT1 Glycylpeptide N-tetradecanoyltransferase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 2 3 1 62.647 56.491 2;3 6.0398E-05 73323 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.2 85.442 762090000 565700000 134080000 62319000 0 0 0 0 0 0 0 0 0 0 0 0 35848 1280 32199 299340;299341;299342;299343;299344;299345 237061;237062;237063;237064;237065;237066;237067;237068;237069;237070 237066 10 MNSLPAERIQEIQK Oxidation (M) 1671.8614 0.86140461 1280 P30419 NMT1 Glycylpeptide N-tetradecanoyltransferase 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2 0 6 2 1 3 55.787 50.133 2;3 5.6336E-28 62824 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 143.97 129.74 318500000 121170000 51092000 146230000 0 0 0 0 0 0 0 0 0 0 0 0 35849 1280 32199 299346;299347;299348;299349;299350;299351 237071;237072;237073;237074;237075;237076 237075 1883 4 MNSLSEANTK Acetyl (Protein N-term);Oxidation (M) 1151.5129 0.51285267 1251;1545 P29508;P48594 SERPINB3;SERPINB4 Serpin B3;Serpin B4 no no 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 2 2 1 2 2 2 1 1 1 1 26.151 26.191 2 5.7768E-05 27686 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 136.57 120.69 276040000 0 0 0 222380000 9185700 10112000 7930600 15873000 4406000 0 0 0 0 0 6153700 35850 1251;1545 32200 299352;299353;299354;299355;299356;299357;299358;299359;299360;299361;299362;299363;299364;299365;299366 237077;237078;237079;237080;237081;237082;237083;237084;237085;237086;237087;237088;237089;237090;237091 237089 1849 12 MNSLSEANTK Acetyl (Protein N-term) 1135.5179 0.51793805 1251;1545 P29508;P48594 SERPINB3;SERPINB4 Serpin B3;Serpin B4 no no 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 2 1 1 1 1 1 1 1 1 46.462 46.445 1;2 0.00030007 52591 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 112.75 94.713 306690000 0 0 0 231760000 10255000 7013100 0 10520000 4668800 21756000 0 15953000 0 4769800 0 35851 1251;1545 32200 299367;299368;299369;299370;299371;299372;299373;299374;299375;299376 237092;237093;237094;237095;237096;237097;237098;237099;237100;237101;237102;237103 237103 12 MNSTEFTEDVEEVLK Acetyl (Protein N-term);Oxidation (M) 1827.8084 0.80842557 2777 Q5T5X7 BEND3 BEN domain-containing protein 3 yes yes 1 1 0 By MS/MS 1 0 1 1 105.83 106.73 2 5.1943E-08 98617 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 106.49 81.106 4481000 0 4481000 0 0 0 0 0 0 0 0 0 0 0 0 0 35852 2777 32201 299377 237104 237104 4416 1 MNSTGGQTPR Oxidation (M) 1063.4717 0.47165656 3993 Q96ST2 IWS1 Protein IWS1 homolog yes yes 0 1 0 By matching By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 5.6322 5.6577 2 0.0449 3462 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 56.258 43.769 8877500 0 0 0 2160500 0 3174900 0 0 1481500 0 0 2060600 0 0 0 35853 3993 32202 299378;299379;299380;299381 237105 237105 0 MNTADQAR Acetyl (Protein N-term) 947.41308 0.41307905 4973 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 yes yes 1 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 22.885 23.05 2 0.0039497 22815 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 75.109 37.551 62075000 0 0 0 4580800 3429000 7148600 3625200 3713200 3833500 7106700 7946800 6795100 7729200 6166500 0 35854 4973 32203 299382;299383;299384;299385;299386;299387;299388;299389;299390;299391;299392 237106;237107;237108;237109;237110;237111 237109 6 MNTADQAR Acetyl (Protein N-term);Oxidation (M) 963.40799 0.40799367 4973 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 yes yes 1 1 0 By MS/MS 1 0 1 1 8.6102 25.755 2 0.010721 6715 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 65.252 27.694 6125500 0 6125500 0 0 0 0 0 0 0 0 0 0 0 0 0 35855 4973 32203 299393 237112 237112 6322 0 MNTSPGTVGSDPVILATAGYDHTVR Acetyl (Protein N-term);Oxidation (M) 2616.249 0.24898042 4184 Q9BVC4 MLST8 Target of rapamycin complex subunit LST8 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 83.409 83.486 3 4.912E-15 96317 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 62.677 55.401 45382000 0 0 0 0 3170200 0 0 4932500 0 10624000 0 13057000 4071800 0 9525900 35856 4184 32204 299394;299395;299396;299397;299398;299399;299400;299401 237113;237114;237115;237116;237117;237118;237119;237120;237121 237115 5670 8 MNTTLSSLK Unmodified 993.51648 0.51648149 1522 P47712 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 42.317 42.821 2 0.0052791 46862 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 78.149 41.964 87981000 0 0 0 0 0 0 0 0 0 0 0 0 0 30144000 57837000 35857 1522 32205 299402;299403;299404;299405;299406;299407;299408 237122;237123;237124;237125;237126;237127 237125 6 MNTTLSSLK Oxidation (M) 1009.5114 0.51139611 1522 P47712 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase yes yes 0 1 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 31.714 31.879 2 0.012451 33951 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 54.436 31.814 90851000 0 0 0 6950600 0 9682600 11573000 6422700 9756700 13535000 0 18737000 13096000 1096200 0 35858 1522 32205 299409;299410;299411;299412;299413;299414;299415;299416;299417 237128;237129 237129 2420 2 MNVAFEEQNAVLQR Oxidation (M) 1663.7988 0.79880436 4800 Q9P0W2 HMG20B SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 61.739 61.751 2 5.1402E-13 69622 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 108.7 82.099 60431000 0 0 0 4513000 4279400 6472800 5614200 7655300 6271900 0 0 12350000 7244900 6030300 0 35859 4800 32206 299418;299419;299420;299421;299422;299423;299424;299425;299426;299427 237130;237131;237132;237133;237134;237135;237136;237137;237138;237139 237135 6160 10 MNVEEDVQEEQSK Unmodified 1563.6723 0.67226644 1970 P78316 NOP14 Nucleolar protein 14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 39.566 38.613 2 2.633E-34 43070 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 175.74 136.12 42246000 0 11486000 0 5260900 7914300 0 6878200 4359700 6346200 0 0 0 0 0 0 35860 1970 32207 299428;299429;299430;299431;299432;299433;299434;299435;299436;299437;299438;299439 237140;237141;237142;237143;237144;237145;237146;237147;237148;237149;237150;237151 237146 12 MNVEEDVQEEQSK Oxidation (M) 1579.6672 0.66718106 1970 P78316 NOP14 Nucleolar protein 14 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 29.025 29.021 2 0.00034725 31573 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 89.731 68.732 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35861 1970 32207 299440;299441;299442;299443 237152;237153;237154;237155 237155 3160 4 MNVFDTELK Unmodified 1095.527 0.52704617 1041 P16615 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 69.352 69.046 2 0.0037823 78228 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 99.139 41.961 159730000 0 33604000 0 8207000 7230100 8334100 6348600 10220000 7530400 12827000 11642000 15099000 9014300 11063000 18612000 35862 1041 32208 299444;299445;299446;299447;299448;299449;299450;299451;299452;299453;299454;299455;299456 237156;237157;237158;237159;237160;237161;237162;237163;237164 237161 8 MNVFDTELK Oxidation (M) 1111.522 0.52196079 1041 P16615 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 0 1 0 By MS/MS 10 0 1 1 57.657 57.14 2 0.039873 65310 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 67.993 18.575 8709100 0 0 0 0 8709100 0 0 0 0 0 0 0 0 0 0 35863 1041 32208 299457 237165 237165 0 MNVLADALK Oxidation (M) 989.52157 0.52156686 1878 P62244 RPS15A 40S ribosomal protein S15a yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.361 58.476 2 0.0055155 66625 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 69.812 35.004 201290000 0 0 0 12735000 11283000 11793000 16506000 10141000 12881000 16174000 19485000 25407000 20784000 21985000 22120000 35864 1878 32209 299458;299459;299460;299461;299462;299463;299464;299465;299466;299467;299468;299469 237166;237167;237168;237169;237170;237171;237172;237173;237174;237175;237176;237177 237173 3047 10 MNVLADALK Unmodified 973.52665 0.52665224 1878 P62244 RPS15A 40S ribosomal protein S15a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 70.847 70.424 2 0.005211 80529 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 80.165 44.965 291940000 0 7496000 0 14524000 15661000 0 24654000 0 0 23710000 31024000 42036000 27577000 34436000 70826000 35865 1878 32209 299470;299471;299472;299473;299474;299475;299476;299477;299478;299479;299480;299481 237178;237179;237180;237181;237182;237183;237184;237185;237186;237187;237188;237189;237190 237179 13 MNVNCNSVPHVSK Unmodified 1484.6864 0.68641714 3453 Q8NG31 CASC5 Protein CASC5 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 42.198 36.997 3 0.024972 50631 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 23.596 10.196 46090000 42518000 0 3572300 0 0 0 0 0 0 0 0 0 0 0 0 35866 3453 32210 299482;299483 237191 237191 1 MNVSPDVNYEELAR Oxidation (M) 1651.7512 0.75118546 1066 P17980 PSMC3 26S protease regulatory subunit 6A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.298 65.36 2 2.5961E-19 74658 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 134.13 125.02 136850000 0 0 0 8881600 14049000 11629000 8166700 0 0 22516000 22139000 34329000 0 5681800 9462800 35867 1066 32211 299484;299485;299486;299487;299488;299489;299490;299491;299492;299493;299494;299495 237192;237193;237194;237195;237196;237197;237198;237199;237200;237201;237202;237203;237204;237205;237206;237207 237205 1507 16 MNVSPDVNYEELAR Unmodified 1635.7563 0.75627084 1066 P17980 PSMC3 26S protease regulatory subunit 6A yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 73.387 73.073 2 0.0016676 90262 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.105 70.776 364030000 0 44331000 0 10611000 17054000 27933000 6671700 10937000 7197400 47592000 53180000 66257000 10258000 12958000 49050000 35868 1066 32211 299496;299497;299498;299499;299500;299501;299502;299503;299504;299505;299506;299507;299508 237208;237209;237210;237211 237209 4 MNVSPDVNYEELARCTDDFNGAQCK Oxidation (M) 2948.2375 0.23750581 1066 P17980 PSMC3 26S protease regulatory subunit 6A yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 79.029 75.359 3 2.9061E-107 93488 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 150.06 148.84 92103000 0 86044000 6058800 0 0 0 0 0 0 0 0 0 0 0 0 35869 1066 32212 299509;299510 237212;237213 237212 1507 2 MNVSPDVNYEELARCTDDFNGAQCK Unmodified 2932.2426 0.24259119 1066 P17980 PSMC3 26S protease regulatory subunit 6A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 82.136 77.47 3 3.4707E-141 97234 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 177.22 174.63 321900000 14897000 295790000 11215000 0 0 0 0 0 0 0 0 0 0 0 0 35870 1066 32212 299511;299512;299513;299514 237214;237215;237216;237217;237218;237219 237214 6 MNVTSLFSFTSPAVK Acetyl (Protein N-term);Oxidation (M) 1685.8335 0.83345853 2580 Q15797 SMAD1 Mothers against decapentaplegic homolog 1 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 96.135 96.225 2 5.3919E-06 111951 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 76.655 73.315 12309000 0 0 0 0 1486800 1265000 0 2017000 0 2743300 2360300 0 0 0 2436600 35871 2580 32213 299515;299516;299517;299518;299519;299520 237220;237221;237222;237223;237224;237225 237221 4228 6 MNVVFAVK Acetyl (Protein N-term) 948.51027 0.5102739 4612 Q9NRW7 VPS45 Vacuolar protein sorting-associated protein 45 yes yes 1 0 0 By MS/MS 2.5 0.5 1 1 2 91.849 87.787 2 0.0057471 108731 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.297 71.159 35371000 0 35371000 0 0 0 0 0 0 0 0 0 0 0 0 0 35872 4612 32214 299521;299522 237226 237226 1 MNYFQVAK Unmodified 999.48479 0.48478743 3702 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 54.691 54.763 2 0.0078141 62401 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 88.35 76.982 144580000 0 0 0 9572100 11500000 11280000 15830000 19181000 6436800 18304000 17206000 16900000 0 18371000 0 35873 3702 32215 299523;299524;299525;299526;299527;299528;299529;299530;299531;299532;299533 237227;237228;237229;237230;237231;237232;237233;237234;237235;237236 237228 10 MNYIGQFLPGYEAPAFMDPLLPK Oxidation (M) 2627.2804 0.28040389 1323 P32754 HPD 4-hydroxyphenylpyruvate dioxygenase yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 100.15 96.113 3 0.0010191 119222 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 40.88 31.294 11942000 0 11942000 0 0 0 0 0 0 0 0 0 0 0 0 0 35874 1323 32216 299534;299535 237237 237237 1971 1 MNYMPGTASLIEDIDKK Acetyl (Protein N-term);Oxidation (M) 1982.9329 0.93291458 254 O15116 LSM1 U6 snRNA-associated Sm-like protein LSm1 yes yes 1 1 1 By MS/MS 2 0 1 1 90.382 85.486 2 0.0018231 106229 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 46.985 36.08 24484000 0 24484000 0 0 0 0 0 0 0 0 0 0 0 0 0 35875 254 32217 299536 237238 237238 339 1 MNYMPGTASLIEDIDKK Acetyl (Protein N-term) 1966.938 0.93799995 254 O15116 LSM1 U6 snRNA-associated Sm-like protein LSm1 yes yes 1 0 1 By MS/MS 2 0 1 1 97.045 92.272 2 2.864E-07 114244 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.92 113.93 64083000 0 64083000 0 0 0 0 0 0 0 0 0 0 0 0 0 35876 254 32217 299537 237239 237239 1 MNYMQNHQAGAPAPSLSR Unmodified 1971.9043 0.90434884 4517 Q9HCK8 CHD8 Chromodomain-helicase-DNA-binding protein 8 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 47.816 48.002 3 1.5723E-05 53040 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.737 62.025 56334000 0 0 0 3018700 0 5817200 0 3302300 4934600 6991400 8827200 0 7763100 5317400 10362000 35877 4517 32218 299538;299539;299540;299541;299542;299543;299544;299545;299546 237240;237241;237242 237241 3 MNYSGDQGQTIR Oxidation (M) 1384.6041 0.60412729 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 1 0 By matching By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 20.881 21.014 2 0.00042832 21749 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 76.465 53.725 6798300 0 0 0 0 1018800 0 0 0 0 0 0 0 3044700 2734800 0 35878 2775 32219 299547;299548;299549;299550 237243;237244 237244 4411 2 MPAAETTGEVCLK Unmodified 1405.6581 0.6581367 166 O00534 VWA5A von Willebrand factor A domain-containing protein 5A yes yes 0 0 0 By MS/MS 2 0 1 1 54.497 48.692 2 0.002481 62886 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.254 77.967 35659000 0 35659000 0 0 0 0 0 0 0 0 0 0 0 0 0 35879 166 32220 299551 237245;237246 237245 2 MPCESSPPESADTPTSTR Unmodified 1948.8143 0.814256 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 36.361 36.513 2 0.00010841 39318 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.924 62.924 20264000 0 0 0 0 2391900 2471700 0 1816000 2518500 2708000 0 0 2847500 0 5510000 35880 1492 32221 299552;299553;299554;299555;299556;299557;299558 237247;237248 237248 2 MPCQLHQVIVAR Unmodified 1450.7537 0.75370884 1057 P17655 CAPN2 Calpain-2 catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 53.308 53.656 3 0.0024647 60102 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 59.198 51.474 34302000 0 0 0 0 0 0 0 7541400 0 0 0 0 0 9270200 17491000 35881 1057 32222 299559;299560;299561 237249;237250;237251;237252 237252 4 MPCQSLQPEPINTPTHTK Unmodified 2077.9925 0.99249514 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 56.837 51.139 3 0.0034209 64103 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 39.863 29.699 68617000 21941000 40962000 5715000 0 0 0 0 0 0 0 0 0 0 0 0 35882 1492 32223 299562;299563;299564;299565 237253;237254;237255;237256 237256 4 MPCVFVTEVK Unmodified 1208.5934 0.5933516 3373 Q8N999 C12orf29 Uncharacterized protein C12orf29 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 74.209 73.89 2 0.0074192 90171 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 80.239 60.452 25460000 0 0 6362200 0 0 0 2614800 0 0 3620300 0 5521000 3747800 3593700 0 35883 3373 32224 299566;299567;299568;299569;299570;299571 237257;237258;237259 237257 3 MPDCSVALPFPSISK Unmodified 1647.8 0.80004991 2427 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 86.065 86.233 2 0.010535 99595 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.426 29.859 4292400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4292400 35884 2427 32225 299572 237260 237260 1 MPDEPEEPVVAVSSPAVPPPTK Oxidation (M) 2288.1246 0.12461475 441 O60885 BRD4 Bromodomain-containing protein 4 yes yes 0 1 0 By matching By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 72.74 72.894 3 7.8044E-08 83983 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 57.496 52.786 20419000 0 0 0 0 0 2899900 0 0 0 6851200 0 0 0 3864400 6803600 35885 441 32226 299573;299574;299575;299576 237261;237262 237261 565 2 MPDEPVEAPALPAPAAPMVSK Oxidation (M) 2133.0486 0.048613037 2493 Q15059 BRD3 Bromodomain-containing protein 3 yes yes 0 1 0 By MS/MS 2 0 1 1 83.299 78.579 3 0.00081901 97796 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 44.641 35.594 16499000 0 16499000 0 0 0 0 0 0 0 0 0 0 0 0 0 35886 2493 32227 299577 237263 237263 4098 1 MPDEPVEAPALPAPAAPMVSK Unmodified 2117.0537 0.053698415 2493 Q15059 BRD3 Bromodomain-containing protein 3 yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 85.201 81.203 2;3 1.9512E-06 100937 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.138 73.711 127130000 0 125830000 1305800 0 0 0 0 0 0 0 0 0 0 0 0 35887 2493 32227 299578;299579;299580 237264;237265 237265 1 MPDMHVNMPK Unmodified 1198.5297 0.52970548 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 55.299 54.135 3 0.0026338 71910 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.056 60.742 321550000 84867000 40620000 19373000 0 0 12963000 12954000 20538000 11372000 17987000 9570800 25061000 13316000 19965000 32967000 35888 2172 32228 299581;299582;299583;299584;299585;299586;299587;299588;299589;299590;299591;299592;299593 237266;237267;237268;237269;237270;237271;237272 237266 6 MPDVDISVPK Unmodified 1099.5583 0.5583463 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 70.357 70.432 2 0.018337 87916 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.939 54.984 192330000 0 0 0 9373000 10399000 10575000 11665000 15313000 10588000 13814000 15994000 22074000 16863000 18818000 36852000 35889 2172 32229 299594;299595;299596;299597;299598;299599;299600;299601;299602;299603;299604;299605;299606 237273;237274;237275;237276;237277;237278;237279 237274 4 MPEANQLHLPNLNSQVDSPSSEK Oxidation (M) 2550.202 0.20203022 5054 Q9UPQ0 LIMCH1 LIM and calponin homology domains-containing protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 72.903 72.312 3 7.2692E-14 90981 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.115 75.311 174950000 0 37908000 0 6290300 7594200 11610000 12831000 17410000 10005000 16855000 8170300 18536000 9848600 0 17886000 35890 5054 32230 299607;299608;299609;299610;299611;299612;299613;299614;299615;299616;299617;299618;299619 237280;237281;237282;237283;237284;237285;237286;237287;237288;237289;237290;237291;237292;237293 237283 6406 14 MPEANQLHLPNLNSQVDSPSSEK Unmodified 2534.2071 0.2071156 5054 Q9UPQ0 LIMCH1 LIM and calponin homology domains-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.7 3.52 2 1 7 2 1 1 1 1 1 1 1 1 77.412 76.404 3 1.8997E-12 92991 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 72.167 68.185 127010000 0 57543000 11395000 0 4070500 0 6004400 11180000 0 7956000 0 13345000 5704100 9809400 0 35891 5054 32230 299620;299621;299622;299623;299624;299625;299626;299627;299628;299629 237294;237295;237296;237297;237298;237299;237300;237301 237299 7 MPEDESTPEK Unmodified 1161.486 0.48596922 1388 P37235;P84074;P61601 HPCAL1;HPCA;NCALD Hippocalcin-like protein 1;Neuron-specific calcium-binding protein hippocalcin;Neurocalcin-delta yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 15.521 15.719 2 0.0040734 14260 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 74.173 61.817 74998000 0 0 0 0 4685700 4445900 4061100 3414200 2933700 5773900 13853000 9399000 4497400 8108800 13825000 35892 1388 32231 299630;299631;299632;299633;299634;299635;299636;299637;299638;299639;299640 237302;237303;237304;237305;237306;237307;237308 237305 7 MPEDGLSDDK Oxidation (M) 1121.4547 0.45466909 2117 Q05682 CALD1 Caldesmon yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 15.419 15.656 2 0.015999 14746 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.65 42.013 9748100 0 0 0 0 922710 0 0 0 790330 0 4023400 4011700 0 0 0 35893 2117 32232 299641;299642;299643;299644;299645 237309;237310 237309 3421 2 MPEEEDEAPVLDVR Oxidation (M) 1643.7349 0.7348667 4971 Q9UKL0 RCOR1 REST corepressor 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.14 60.245 2 3.6935E-19 67811 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 131.84 107.05 99495000 0 0 0 7739500 6588600 9694400 8542000 4980100 6056400 8117800 8200700 12261000 9420800 8186400 9707300 35894 4971 32233 299646;299647;299648;299649;299650;299651;299652;299653;299654;299655;299656;299657 237311;237312;237313;237314;237315;237316;237317;237318;237319;237320;237321;237322 237314 6317 12 MPEEEDEAPVLDVR Unmodified 1627.74 0.73995207 4971 Q9UKL0 RCOR1 REST corepressor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 67.423 67.463 2 3.9617E-12 76341 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 129.82 117.24 269000000 0 0 0 16537000 20300000 27794000 0 24676000 0 33398000 0 42111000 31598000 25744000 46841000 35895 4971 32233 299658;299659;299660;299661;299662;299663;299664;299665;299666 237323;237324;237325;237326;237327;237328;237329;237330 237325 8 MPEEEDEAPVLDVRYASAS Oxidation (M) 2122.9365 0.93647963 4971 Q9UKL0 RCOR1 REST corepressor 1 yes yes 0 1 1 By MS/MS 2.5 0.5 1 1 2 75.812 71.615 2 7.784E-146 89343 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 225.23 219.5 52147000 0 52147000 0 0 0 0 0 0 0 0 0 0 0 0 0 35896 4971 32234 299667;299668 237331;237332 237331 6317 2 MPEEEDEAPVLDVRYASAS Unmodified 2106.9416 0.94156501 4971 Q9UKL0 RCOR1 REST corepressor 1 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 79.264 73.836 2 4.0494E-163 92895 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 281.48 278.77 249670000 7244300 242430000 0 0 0 0 0 0 0 0 0 0 0 0 0 35897 4971 32234 299669;299670;299671 237333;237334;237335 237333 3 MPEFYNR Unmodified 955.42219 0.42218717 737 P00966 ASS1 Argininosuccinate synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.115 46.284 2 0.023406 50729 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.838 75.723 559100000 0 0 0 17149000 14578000 23215000 20204000 28018000 10833000 23347000 78485000 66958000 26281000 50447000 199590000 35898 737 32235 299672;299673;299674;299675;299676;299677;299678;299679;299680;299681;299682;299683 237336;237337;237338;237339;237340;237341;237342;237343;237344;237345 237337 10 MPEMHFK Oxidation (M) 934.40409 0.40409427 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24.318 23.704 2 0.031367 26364 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.801 54.228 305610000 83263000 19135000 34439000 8439200 12281000 9905300 13437000 13499000 6733200 12072000 13072000 17018000 26162000 15698000 20452000 35899 2172 32236 299684;299685;299686;299687;299688;299689;299690;299691;299692;299693;299694;299695;299696;299697;299698 237346;237347;237348 237347 3 MPEMHFK 2 Oxidation (M) 950.39901 0.39900889 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 2 0 By MS/MS By MS/MS 2 0 2 1 1 10.884 7.8258 2 0.036166 9854 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 83.377 45.731 51114000 28404000 0 22710000 0 0 0 0 0 0 0 0 0 0 0 0 35900 2172 32236 299699;299700 237349 237349 0 MPEMNIK Unmodified 861.40885 0.40884529 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.962 43.137 2 0.020823 48210 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 107.74 61.393 2667200000 0 0 0 141210000 132790000 134810000 162540000 259460000 153800000 192760000 277190000 279390000 322360000 253800000 357080000 35901 2172 32237 299701;299702;299703;299704;299705;299706;299707;299708;299709;299710;299711;299712 237350;237351;237352;237353;237354;237355;237356;237357;237358 237352 8 MPEMNIK 2 Oxidation (M) 893.39867 0.39867454 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 2 2 2 2 2 2 2 1 2 2 2 8.4901 8.6284 2 0.015829 6843 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.776 46.928 597920000 0 0 0 20873000 29512000 31418000 48631000 42015000 39334000 47959000 83661000 43203000 93948000 53502000 63859000 35902 2172 32237 299713;299714;299715;299716;299717;299718;299719;299720;299721;299722;299723;299724;299725;299726;299727;299728;299729;299730;299731;299732;299733;299734 237359;237360;237361;237362;237363;237364;237365;237366;237367;237368 237367 3530;3531 9 MPEMNIK Oxidation (M) 877.40376 0.40375991 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 25.633 25.791 2 0.028936 27422 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 67.035 39.718 198380000 0 0 0 19976000 21318000 22275000 25421000 0 20721000 24955000 0 36205000 0 25024000 2481800 35903 2172 32237 299735;299736;299737;299738;299739;299740;299741;299742;299743 237369;237370;237371 237369 3530;3531 3 MPEMSIKPQK Unmodified 1187.6043 0.60425064 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 39.576 39.864 3 0.023346 42985 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.704 28.27 116390000 0 0 0 9091000 0 0 12558000 0 0 12338000 17125000 17480000 14787000 12101000 20906000 35904 2172 32238 299744;299745;299746;299747;299748;299749;299750;299751 237372 237372 1 MPFLSISSPK Oxidation (M) 1121.5791 0.57908174 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.58 1.79 1 18 1 2 2 1 2 2 1 1 1 1 2 2 1 66.833 66.431 2 0.0041787 76826 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 65.305 47.92 129260000 9207800 0 0 10288000 10437000 5486800 15013000 14086000 6302900 6436900 6608600 7181600 10734000 15750000 11728000 35905 2172 32239 299752;299753;299754;299755;299756;299757;299758;299759;299760;299761;299762;299763;299764;299765;299766;299767;299768;299769;299770 237373;237374;237375;237376;237377;237378;237379;237380;237381;237382;237383;237384;237385;237386 237384 3532 12 MPFLSISSPK Unmodified 1105.5842 0.58416712 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 78.87 78.301 2 0.007439 90377 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 62.463 31.174 347530000 34687000 0 0 15906000 12611000 17317000 17168000 31958000 17814000 24648000 24692000 37257000 25394000 26882000 61193000 35906 2172 32239 299771;299772;299773;299774;299775;299776;299777;299778;299779;299780;299781;299782;299783 237387;237388;237389;237390;237391;237392;237393;237394 237387 8 MPFQTSPGGK Unmodified 1048.5012 0.50116577 1662 P51608 MECP2 Methyl-CpG-binding protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 43.492 36.699 2 0.002708 50453 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.64 61.642 12219000 12219000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35907 1662 32240 299784 237395;237396 237395 2 MPGAPETAPGDGAGASR Unmodified 1540.694 0.69400493 455 O75116 ROCK2 Rho-associated protein kinase 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 34.939 34.417 2 7.093E-15 37182 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 97.911 91.378 123480000 0 33062000 0 2800600 2670100 7413200 4606200 5161800 3300400 8848700 11415000 14198000 4896500 5129400 19976000 35908 455 32241 299785;299786;299787;299788;299789;299790;299791;299792;299793;299794;299795;299796;299797;299798 237397;237398;237399;237400;237401;237402;237403;237404;237405;237406;237407;237408 237406 12 MPGAPETAPGDGAGASR Oxidation (M) 1556.6889 0.68891956 455 O75116 ROCK2 Rho-associated protein kinase 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 23.323 23.984 2 0.00016665 24256 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.55 57.344 6271900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6271900 35909 455 32241 299799;299800;299801 237409;237410;237411 237411 581 3 MPGELVLENR Unmodified 1156.591 0.59104341 3029 Q71RC2 LARP4 La-related protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 62.177 62.142 2 0.01243 71120 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 52.49 36.287 45956000 0 0 0 4745200 5117400 7498100 0 0 4767000 8177300 0 8845000 0 6806600 0 35910 3029 32242 299802;299803;299804;299805;299806;299807;299808 237412;237413;237414;237415;237416;237417;237418;237419 237413 7 MPGNPYSSNEPGIGPLMR Unmodified 1915.8921 0.89205282 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 78.348 78.526 2 1.527E-05 90396 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.021 73.763 12915000 0 0 0 0 0 0 0 0 0 0 0 2687700 0 2289200 7938500 35911 2775 32243 299809;299810;299811 237420 237420 1 MPGNPYSSNEPGIGPLMR 2 Oxidation (M) 1947.8819 0.88188206 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 2 0 By matching By matching By matching By MS/MS By matching 10 0 5 1 1 1 1 1 64.785 64.776 2 0.00016911 74574 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 53.528 48.351 11671000 0 0 0 1425500 0 2142400 0 0 0 0 3340000 0 2859300 1903600 0 35912 2775 32243 299812;299813;299814;299815;299816 237421 237421 4412;4413 1 MPGSVIPPPLVR Unmodified 1261.7217 0.72166366 3208 Q86YP4 GATAD2A Transcriptional repressor p66-alpha yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 79.266 79.328 2 0.0038911 91257 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.153 46.116 39793000 0 0 0 2322500 0 0 0 0 0 0 4107600 13189000 6263000 6667500 7242700 35913 3208 32244 299817;299818;299819;299820;299821;299822 237422;237423 237422 2 MPGSVIPPPLVR Oxidation (M) 1277.7166 0.71657828 3208 Q86YP4 GATAD2A Transcriptional repressor p66-alpha yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 73.56 73.731 2 0.0034267 85390 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 55.064 46.201 35583000 0 0 0 0 0 0 4487400 2625200 3438500 5780000 4614300 5242500 4740300 4654700 0 35914 3208 32244 299823;299824;299825;299826;299827;299828;299829;299830 237424;237425;237426 237425 4828 3 MPHSVPQPLVEK Oxidation (M) 1376.7122 0.71222118 2708 Q53SF7 COBLL1 Cordon-bleu protein-like 1 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 43.347 38.08 3 0.0052552 52170 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.388 38.288 55611000 48211000 0 7399600 0 0 0 0 0 0 0 0 0 0 0 0 35915 2708 32245 299831;299832 237427 237427 4365 1 MPHSVPQPLVEK Unmodified 1360.7173 0.71730656 2708 Q53SF7 COBLL1 Cordon-bleu protein-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 50.034 48.786 3 0.0089699 68215 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.484 33.864 251920000 65593000 14808000 12670000 14954000 8492900 16708000 0 0 9579800 15873000 14169000 21114000 13508000 8839000 35610000 35916 2708 32245 299833;299834;299835;299836;299837;299838;299839;299840;299841;299842;299843;299844;299845 237428;237429;237430;237431 237429 3 MPIEDSSPEK Unmodified 1131.5118 0.51179004 488 O75376 NCOR1 Nuclear receptor corepressor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.365 28.56 2 0.02179 30458 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 46.462 18.288 50296000 0 0 0 2581900 3331900 3973700 2929600 3050400 3135200 4979200 4902500 4150800 5754600 4472600 7034200 35917 488 32246 299846;299847;299848;299849;299850;299851;299852;299853;299854;299855;299856;299857 237432;237433;237434 237432 3 MPIEGSENPERPFLEK Oxidation (M) 1887.9037 0.90366336 412 O60563 CCNT1 Cyclin-T1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 54.055 53.808 3 0.00011968 60631 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 65.805 48.403 132850000 0 0 19869000 0 0 18434000 19519000 0 10895000 0 15843000 13083000 18671000 16541000 0 35918 412 32247 299858;299859;299860;299861;299862;299863;299864;299865;299866;299867 237435;237436;237437;237438;237439;237440;237441;237442;237443;237444 237439 511 10 MPIEGSENPERPFLEK Unmodified 1871.9087 0.90874874 412 O60563 CCNT1 Cyclin-T1 yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS 6.8 3.92 2 3 1 1 1 1 1 65.8 63.45 3 2.9626E-22 71315 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 125.28 113.64 96814000 11802000 0 17418000 8057400 0 0 0 0 0 0 22581000 0 0 0 36955000 35919 412 32247 299868;299869;299870;299871;299872 237445;237446;237447 237446 3 MPIEIEQK Unmodified 986.51067 0.51066783 4425 Q9H6T3 RPAP3 RNA polymerase II-associated protein 3 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 52.338 45.434 2 0.015236 59214 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.302 60.506 165720000 5166500 160550000 0 0 0 0 0 0 0 0 0 0 0 0 0 35920 4425 32248 299873;299874 237448 237448 1 MPINEPAPGK Oxidation (M) 1068.5274 0.52738052 1323 P32754 HPD 4-hydroxyphenylpyruvate dioxygenase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.2 3.74 7 2 16 2 5 2 1 1 1 1 1 2 2 2 2 2 1 22.975 21.795 2 1.612E-06 27904 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 150.36 128.83 1061400000 53818000 805960000 17040000 2648700 2051800 3320800 3149400 0 2606700 7228400 45095000 46088000 7911300 28495000 35997000 35921 1323 32249 299875;299876;299877;299878;299879;299880;299881;299882;299883;299884;299885;299886;299887;299888;299889;299890;299891;299892;299893;299894;299895;299896;299897;299898;299899 237449;237450;237451;237452;237453;237454;237455;237456;237457;237458;237459;237460;237461;237462;237463;237464;237465;237466;237467;237468;237469;237470 237453 1972 17 MPINEPAPGK Unmodified 1052.5325 0.5324659 1323 P32754 HPD 4-hydroxyphenylpyruvate dioxygenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.65 3.66 1 3 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 39.625 38.912 2 5.0047E-11 42054 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 163.15 136.35 6537100000 208410000 5589300000 27342000 11633000 12814000 23102000 24193000 18293000 23312000 20507000 120240000 80585000 18181000 74725000 284460000 35922 1323 32249 299900;299901;299902;299903;299904;299905;299906;299907;299908;299909;299910;299911;299912;299913;299914;299915;299916 237471;237472;237473;237474;237475;237476;237477;237478;237479;237480;237481;237482;237483;237484;237485;237486;237487;237488;237489;237490;237491;237492 237487 22 MPINEPAPGKK Unmodified 1180.6274 0.62742892 1323 P32754 HPD 4-hydroxyphenylpyruvate dioxygenase yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 31.092 26.145 2;3 0.0016378 36684 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 103.7 82.4 90244000 73669000 0 16575000 0 0 0 0 0 0 0 0 0 0 0 0 35923 1323 32250 299917;299918;299919 237493;237494;237495 237493 1 MPISLQQIR Unmodified 1084.6063 0.60629955 3143 Q86U86 PBRM1 Protein polybromo-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.767 69.844 2 0.012853 79978 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.682 45.301 69228000 0 0 0 2982200 3145200 6137400 3970200 4687000 3872000 5872400 5551700 7649400 5044400 8966500 11350000 35924 3143 32251 299920;299921;299922;299923;299924;299925;299926;299927;299928;299929;299930;299931 237496;237497;237498;237499;237500 237500 5 MPLDDLDREDEVR Oxidation (M) 1617.7305 0.73045002 1797 P57740 NUP107 Nuclear pore complex protein Nup107 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 48.685 49.278 3 0.0021395 55712 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 47.666 35.873 28022000 0 0 0 0 0 0 0 0 0 0 0 6923700 14484000 0 6614000 35925 1797 32252 299932;299933;299934;299935 237501;237502;237503 237503 2917 3 MPLDDLDREDEVR Unmodified 1601.7355 0.7355354 1797 P57740 NUP107 Nuclear pore complex protein Nup107 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 60.013 59.999 3 0.025474 68336 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 32.624 21.01 25234000 0 0 0 0 4636700 0 5386900 10595000 4615900 0 0 0 0 0 0 35926 1797 32252 299936;299937;299938;299939 237504 237504 1 MPLDDLDREDEVRLLK Unmodified 1955.9986 0.99862638 1797 P57740 NUP107 Nuclear pore complex protein Nup107 yes yes 0 0 2 By MS/MS 2 0 1 1 83.434 75.304 4 0.0098799 98425 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 38.613 28.825 35496000 35496000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35927 1797 32253 299940 237505 237505 1 MPLFEHYTR Unmodified 1192.5699 0.56991404 1240 P28838 LAP3 Cytosol aminopeptidase yes yes 0 0 0 By matching By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 55.711 56.121 3 0.047157 62570 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.71 27.389 17058000 0 0 0 0 0 0 0 0 0 0 1609200 3409200 962000 2267300 8809800 35928 1240 32254 299941;299942;299943;299944;299945 237506 237506 1 MPLFGASAPGK Unmodified 1074.5532 0.55320134 3226 Q8IVF2 AHNAK2 Protein AHNAK2 yes yes 0 0 0 By MS/MS 2 0 1 1 72.286 64.047 2 0.0095872 85003 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.962 45.662 11225000 11225000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35929 3226 32255 299946 237507 237507 1 MPLIGLGTWK Unmodified 1114.6209 0.62088698 999 P14550 AKR1A1 Alcohol dehydrogenase [NADP(+)] yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 6.8 3.92 2 3 1 1 1 1 1 89.029 86.515 2 0.0043308 99730 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.233 0 74495000 26184000 18848000 0 0 0 0 0 0 0 0 2733500 0 0 2102800 24627000 35930 999 32256 299947;299948;299949;299950;299951 237508;237509;237510 237509 3 MPLTEPLR Oxidation (M) 971.511 0.51100218 522 O75592 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 yes yes 0 1 0 By MS/MS 10 0 1 1 12.93 13.426 2 0.030005 12229 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 48.504 18.697 1344900 0 0 0 0 0 0 0 0 0 0 1344900 0 0 0 0 35931 522 32257 299952 237511 237511 1 MPMYQVK Acetyl (Protein N-term);2 Oxidation (M) 969.42997 0.42997466 2244 Q13155 AIMP2 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 yes yes 1 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 25.517 25.732 2 0.014282 27288 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 40.946 28.119 153380000 0 0 0 0 8500700 0 14600000 20927000 12602000 15579000 20102000 0 18684000 20406000 21978000 35932 2244 32258 299953;299954;299955;299956;299957;299958;299959;299960;299961;299962;299963 237512;237513;237514;237515;237516;237517;237518;237519;237520;237521;237522 237512 3645;3646 11 MPNGMYDGSALIR Unmodified 1423.6588 0.6588054 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.713 70.783 2 0.00039956 81479 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 97.456 86.627 71219000 0 0 0 11562000 3386200 4409800 2489200 6155400 2651900 4766500 8304000 5772500 4933500 5924400 10864000 35933 2451 32259 299964;299965;299966;299967;299968;299969;299970;299971;299972;299973;299974;299975 237523;237524;237525;237526;237527;237528;237529;237530;237531;237532;237533;237534 237523 12 MPPPTILSTVPR Oxidation (M) 1323.7221 0.72205759 3404 Q8NBZ0 INO80E INO80 complex subunit E yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 71.206 71.186 2 0.00086636 82157 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 68.893 58.662 23852000 0 0 0 2228700 2559900 0 3508100 0 0 4280100 0 4976400 3810200 2488800 0 35934 3404 32260 299976;299977;299978;299979;299980;299981;299982 237535;237536;237537 237537 4961 3 MPPYDEQTQAFIDAAQEAR Oxidation (M) 2195.9793 0.9793475 996 P14314 PRKCSH Glucosidase 2 subunit beta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 20 2 1 2 2 2 2 2 2 1 2 2 80.05 80.16 2;3 7.5856E-43 92985 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 124.45 111.47 323060000 0 0 0 0 11036000 4894200 12907000 15015000 14696000 31909000 45116000 53783000 5204000 34288000 94213000 35935 996 32261 299983;299984;299985;299986;299987;299988;299989;299990;299991;299992;299993;299994;299995;299996;299997;299998;299999;300000;300001;300002 237538;237539;237540;237541;237542;237543;237544;237545;237546;237547;237548;237549;237550 237545 1349 13 MPPYDEQTQAFIDAAQEAR Unmodified 2179.9844 0.98443288 996 P14314 PRKCSH Glucosidase 2 subunit beta yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 2 83.331 82.993 2;3 5.1078E-58 95965 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 188.25 175.27 302050000 0 178970000 0 0 2384100 2526600 0 3973500 2841100 8025200 11764000 19982000 0 10726000 60856000 35936 996 32261 300003;300004;300005;300006;300007;300008;300009;300010;300011;300012;300013 237551;237552;237553;237554;237555;237556;237557;237558;237559 237555 9 MPPYDEQTQAFIDAAQEARNK Oxidation (M) 2438.1172 0.11723796 996 P14314 PRKCSH Glucosidase 2 subunit beta yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 80.702 76.017 3 2.4096E-99 96519 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 168.05 160.16 207940000 22537000 127480000 57925000 0 0 0 0 0 0 0 0 0 0 0 0 35937 996 32262 300014;300015;300016;300017 237560;237561;237562;237563;237564;237565 237562 1349 5 MPPYDEQTQAFIDAAQEARNK Unmodified 2422.1223 0.12232334 996 P14314 PRKCSH Glucosidase 2 subunit beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 2 2 83.254 79.029 3 9.4476E-120 96830 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 197.05 189.6 473060000 34554000 372500000 66007000 0 0 0 0 0 0 0 0 0 0 0 0 35938 996 32262 300018;300019;300020;300021;300022 237566;237567;237568;237569;237570;237571 237571 6 MPRGGSLESDGCPK Unmodified 1489.6653 0.66534734 1662 P51608 MECP2 Methyl-CpG-binding protein 2 yes yes 0 0 1 By MS/MS 2 0 1 1 29.468 23.848 3 0.025474 33554 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 36.928 31.208 17494000 17494000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35939 1662 32263 300023 237572 237572 1 MPRPDEEQEK Oxidation (M) 1273.5609 0.5608655 3686 Q92917 GPKOW G patch domain and KOW motifs-containing protein yes yes 0 1 1 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 2 2 1 2 1 1 1 2 2 2 2 6.8006 6.9267 3 0.0068312 4259 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.559 27.797 206900000 0 0 0 7940200 14293000 16119000 9620000 12037000 6724800 12154000 17716000 26063000 25019000 18810000 40408000 35940 3686 32264 300024;300025;300026;300027;300028;300029;300030;300031;300032;300033;300034;300035;300036;300037;300038;300039;300040;300041;300042 237573;237574;237575 237574 5242 2 MPRPDEEQEK Unmodified 1257.566 0.56595087 3686 Q92917 GPKOW G patch domain and KOW motifs-containing protein yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 14.517 14.68 2;3 0.024055 13420 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 112.36 65.16 556880000 0 0 0 31638000 36161000 32598000 32366000 25838000 29724000 65504000 52490000 58192000 44294000 47499000 100570000 35941 3686 32264 300043;300044;300045;300046;300047;300048;300049;300050;300051;300052;300053;300054;300055;300056;300057;300058;300059;300060;300061;300062;300063;300064;300065;300066 237576;237577;237578 237577 1 MPSAKQRGSK Acetyl (Protein N-term);Oxidation (M) 1146.5815 0.58154136 2135 Q07065 CKAP4 Cytoskeleton-associated protein 4 yes yes 1 1 2 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 40.778 40.957 2 0.0071698 45522 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 45.335 16.174 73143000 0 0 0 11360000 0 0 13190000 0 9018300 0 19068000 20507000 0 0 0 35942 2135 32265 300067;300068;300069;300070;300071 237579;237580 237579 3436 1 MPSESAAQSLAVALPLQTK Oxidation (M) 1957.019 0.019027468 349 O43660 PLRG1 Pleiotropic regulator 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 82.467 82.546 2 6.539E-24 95734 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 99.481 85.801 37863000 0 0 0 0 5144300 4689000 4050100 2997900 3966700 7694300 0 9321100 0 0 0 35943 349 32266 300072;300073;300074;300075;300076;300077;300078 237581;237582;237583;237584;237585;237586;237587 237586 435 7 MPSESAAQSLAVALPLQTK Unmodified 1941.0241 0.024112846 349 O43660 PLRG1 Pleiotropic regulator 1 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 84.867 84.997 2 0.00018598 98186 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.482 50.448 11005000 0 0 0 0 0 0 0 0 0 2367300 0 0 0 1922800 6714500 35944 349 32266 300079;300080;300081 237588 237588 1 MPSFGASAPGK Unmodified 1048.5012 0.50116577 3226 Q8IVF2 AHNAK2 Protein AHNAK2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching 7.44 3.62 2 1 6 1 2 1 1 1 1 1 1 47.399 45.582 2 0.0081369 61212 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.276 35.187 50486000 13112000 8062900 0 0 0 0 3165300 0 0 5406100 0 5345700 4406500 3602300 7384800 35945 3226 32267 300082;300083;300084;300085;300086;300087;300088;300089;300090 237589;237590;237591;237592 237591 4 MPSFGVSAPGK Unmodified 1076.5325 0.5324659 3226 Q8IVF2 AHNAK2 Protein AHNAK2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.65 2.93 2 1 14 1 2 1 1 1 1 1 1 1 2 1 1 2 1 59.594 58.593 2 0.00064166 66488 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 78.556 63.774 539780000 90079000 116900000 0 20409000 22088000 18520000 23019000 29752000 19235000 27438000 31526000 39124000 32861000 25783000 43048000 35946 3226 32268 300091;300092;300093;300094;300095;300096;300097;300098;300099;300100;300101;300102;300103;300104;300105;300106;300107 237593;237594;237595;237596;237597;237598;237599;237600;237601;237602;237603;237604;237605;237606 237600 14 MPSFGVSAPGK Oxidation (M) 1092.5274 0.52738052 3226 Q8IVF2 AHNAK2 Protein AHNAK2 yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 44.72 45.22 2 0.0096366 49606 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.368 24.669 43492000 0 0 0 0 0 0 0 0 0 8208500 0 14471000 7473200 0 13339000 35947 3226 32268 300108;300109;300110;300111 237607 237607 4842 1 MPSGEFAR Oxidation (M) 909.40145 0.40145173 959 P12004 PCNA Proliferating cell nuclear antigen yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 2 2 2 2 2 17.34 17.693 2 0.0032252 17127 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 108.92 89.969 157540000 0 0 0 0 3488100 0 0 4734200 0 0 36663000 25348000 13372000 22394000 51538000 35948 959 32269 300112;300113;300114;300115;300116;300117;300118;300119;300120;300121;300122;300123 237608;237609;237610;237611;237612;237613;237614;237615;237616;237617;237618 237609 1254 11 MPSGEFAR Unmodified 893.40654 0.40653711 959 P12004 PCNA Proliferating cell nuclear antigen yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 30.652 30.9 2 0.036638 33338 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 89.142 72.215 355290000 0 0 0 25400000 0 0 0 21070000 0 0 99915000 0 0 0 208900000 35949 959 32269 300124;300125;300126;300127 237619 237619 0 MPSLEISAPK Unmodified 1071.5634 0.56343168 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68.096 67.536 2 0.011715 77256 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 53.751 43.613 385700000 0 119490000 1867900 18531000 15354000 16171000 19111000 21241000 13577000 17361000 23853000 30859000 23195000 20866000 44219000 35950 2172 32270 300128;300129;300130;300131;300132;300133;300134;300135;300136;300137;300138;300139;300140;300141 237620;237621;237622;237623;237624;237625;237626;237627;237628;237629;237630;237631 237626 12 MPSLEISAPK Oxidation (M) 1087.5583 0.5583463 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 52.843 52.966 2 0.0093412 59334 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 50.834 28.791 49115000 0 0 0 8029300 0 4670300 0 0 6628500 0 0 10625000 15324000 3837200 0 35951 2172 32270 300142;300143;300144;300145;300146;300147 237632;237633;237634 237632 3533 3 MPSLPSYK Oxidation (M) 937.4579 0.45790397 1249 P29401 TKT Transketolase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 41.685 42.242 2 0.0030578 46399 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 113.14 70.136 185170000 0 0 0 0 0 0 0 0 0 0 43217000 41397000 0 27275000 73283000 35952 1249 32271 300148;300149;300150;300151 237635;237636;237637 237635 1843 3 MPSMNIQTHK Unmodified 1185.5634 0.56344845 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38.215 37.318 3 0.00010807 51637 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.79 94.246 414290000 72534000 35180000 7828100 13531000 15377000 14841000 17208000 29410000 16887000 20474000 26638000 39063000 29617000 31586000 44113000 35953 2172 32272 300152;300153;300154;300155;300156;300157;300158;300159;300160;300161;300162;300163;300164;300165;300166 237638;237639;237640;237641;237642;237643;237644;237645;237646;237647;237648 237642 4 MPSMNIQTHK 2 Oxidation (M) 1217.5533 0.5532777 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 8.212 8.3224 3 0.0071658 6812 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 42.718 29.762 30515000 0 0 0 2752400 0 1680600 3962700 0 0 3099600 0 5417900 7061500 0 6540800 35954 2172 32272 300167;300168;300169;300170;300171;300172;300173 237649 237649 3534;3535 1 MPSMPTTSR Unmodified 1006.4576 0.4575864 2301 Q13495 MAMLD1 Mastermind-like domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 36.943 37.684 2 0.030157 40587 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.283 32.844 16815000 0 0 0 0 0 0 0 0 0 0 0 9143500 0 0 7671500 35955 2301 32273 300174;300175 237650 237650 1 MPSSGFAAEGR Unmodified 1108.4971 0.49714303 2473 Q15018 FAM175B BRISC complex subunit Abro1 yes yes 0 0 0 By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 34.653 34.764 2 0.022892 37085 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.704 23.719 37177000 0 0 0 2302600 1385800 0 1842400 2193400 1758000 4150200 0 0 2538700 4162600 16843000 35956 2473 32274 300176;300177;300178;300179;300180;300181;300182;300183;300184 237651;237652 237651 2 MPTFESEETK Oxidation (M) 1213.5173 0.51726935 2225 Q13033 STRN3 Striatin-3 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 30.232 25.838 2 0.0063041 33622 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.688 65.047 7857500 0 7857500 0 0 0 0 0 0 0 0 0 0 0 0 0 35957 2225 32275 300185;300186 237653 237653 3613 1 MPTFSTPGAK Oxidation (M) 1051.5008 0.50083142 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 35.229 34.547 2 0.0067173 38227 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 56.432 35.95 85417000 0 22478000 2544600 0 3208400 0 7196000 6230600 5527700 6410300 9946500 0 8905700 0 12969000 35958 2172 32276 300187;300188;300189;300190;300191;300192;300193;300194;300195;300196;300197 237654;237655;237656;237657;237658;237659;237660;237661 237657 3536 7 MPTFSTPGAK Unmodified 1035.5059 0.5059168 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 55.573 48.596 2 0.028845 55336 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 58.433 13.098 250900000 81081000 169820000 0 0 0 0 0 0 0 0 0 0 0 0 0 35959 2172 32276 300198;300199;300200 237662;237663;237664 237663 2 MPTGEIEIK Unmodified 1016.5212 0.52123251 2951 Q6PI48 DARS2 Aspartate--tRNA ligase, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 57.237 51.415 2 0.0053946 66240 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.71 69.611 38951000 0 38951000 0 0 0 0 0 0 0 0 0 0 0 0 0 35960 2951 32277 300201 237665 237665 1 MPTPVILLK Unmodified 1010.6198 0.61982435 4065 Q99832 CCT7 T-complex protein 1 subunit eta yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS 7.5 3.55 2 2 8 4 1 1 1 1 1 1 2 96.068 94.793 2 0.0030441 117883 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.37 116.37 98800000 0 86832000 0 0 755520 0 756490 1148600 0 1552100 0 1120800 780730 0 5853600 35961 4065 32278 300202;300203;300204;300205;300206;300207;300208;300209;300210;300211;300212;300213 237666;237667;237668;237669;237670;237671;237672 237669 7 MPTPVILLK Oxidation (M) 1026.6147 0.61473897 4065 Q99832 CCT7 T-complex protein 1 subunit eta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 88.562 86.893 2 0.00078651 111633 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.47 76.829 11303000 0 6766700 0 0 1754200 0 0 0 0 0 0 0 2782500 0 0 35962 4065 32278 300214;300215;300216 237673;237674;237675 237673 5566 1 MPTQSEEEK Unmodified 1077.4648 0.46483985 4140 Q9BTC8 MTA3 Metastasis-associated protein MTA3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 9.355 9.204 2 0.0046593 6515 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 119.27 52.593 63693000 0 12806000 0 2895200 3812000 2860300 3066600 0 1942600 3173500 7929300 5001000 7843800 5501700 6860600 35963 4140 32279 300217;300218;300219;300220;300221;300222;300223;300224;300225;300226;300227;300228 237676;237677;237678;237679;237680;237681 237678 6 MPTRLDGERPGPNR Unmodified 1594.7998 0.79980741 2272 Q13330 MTA1 Metastasis-associated protein MTA1 yes yes 0 0 2 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 27.975 28.209 4 0.022431 29821 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 27.969 14.833 69414000 0 0 0 0 4031500 7646600 5191500 0 6498500 7647500 10443000 8353900 0 9125200 10476000 35964 2272 32280 300229;300230;300231;300232;300233;300234;300235;300236;300237 237682;237683 237683 2 MPVSIDLENSQK Unmodified 1359.6704 0.67041595 3999 Q96T58 SPEN Msx2-interacting protein yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 64.039 63.846 2 0.037166 73577 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 35.511 22.895 3648400 0 0 0 0 2035600 0 1612800 0 0 0 0 0 0 0 0 35965 3999 32281 300238;300239 237684 237684 1 MPWSITEK Unmodified 990.48445 0.48445308 5110 Q9Y2L1 DIS3 Exosome complex exonuclease RRP44 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 68.61 62.637 2 0.026263 77085 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 127.12 104.99 275530000 188310000 54960000 32262000 0 0 0 0 0 0 0 0 0 0 0 0 35966 5110 32282 300240;300241;300242 237685;237686 237686 1 MPYNEAENK Unmodified 1094.4703 0.47025958 4378 Q9H3H1 TRIT1 tRNA dimethylallyltransferase, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 21.383 17.67 2 0.01582 23174 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.676 61.894 23638000 0 23638000 0 0 0 0 0 0 0 0 0 0 0 0 0 35967 4378 32283 300243 237687 237687 1 MPYQEIK Oxidation (M) 923.44225 0.44225391 417 O60610 DIAPH1 Protein diaphanous homolog 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.226 21.43 2 0.045272 21857 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 50.966 28.344 63374000 0 0 0 4318300 4086000 6746700 5220200 4388200 4288700 5538800 6255000 7017400 5537500 4500000 5477500 35968 417 32284 300244;300245;300246;300247;300248;300249;300250;300251;300252;300253;300254;300255 237688;237689;237690 237690 3 MPYQEIK Unmodified 907.44734 0.44733929 417 O60610 DIAPH1 Protein diaphanous homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.717 34.898 2 0.024641 37763 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 82.386 54.279 250620000 0 0 0 13851000 10986000 23558000 17102000 14614000 15045000 27122000 27935000 22895000 25200000 18975000 33335000 35969 417 32284 300256;300257;300258;300259;300260;300261;300262;300263;300264;300265;300266;300267 237691 237691 1 MPYQYPALTPEQK Unmodified 1564.7596 0.7595653 771 P04075 ALDOA Fructose-bisphosphate aldolase A yes yes 0 0 0 By MS/MS 2 0 1 1 72.69 67.145 2 0.00080652 84838 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.866 75.002 56168000 0 56168000 0 0 0 0 0 0 0 0 0 0 0 0 0 35970 771 32285 300268 237692;237693 237693 2 MPYQYPALTPEQKK Unmodified 1692.8545 0.85452832 771 P04075 ALDOA Fructose-bisphosphate aldolase A yes yes 0 0 1 By MS/MS 2 0 1 1 66.819 58.525 3 0.0087206 78491 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.813 35.471 7070900 7070900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35971 771 32286 300269 237694 237694 1 MQAGEEVTELR Unmodified 1261.5973 0.597251 2786 Q5T8P6 RBM26 RNA-binding protein 26 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 45.949 45.921 2 6.9746E-05 51486 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 112.75 74.662 221320000 0 0 0 27061000 37702000 0 0 32802000 0 44055000 0 0 36742000 42963000 0 35972 2786 32287 300270;300271;300272;300273;300274;300275;300276;300277;300278;300279 237695;237696;237697;237698;237699;237700;237701;237702;237703;237704 237696 10 MQAGEEVTELR Oxidation (M) 1277.5922 0.59216562 2786 Q5T8P6 RBM26 RNA-binding protein 26 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.8 36.986 2 6.8483E-06 41637 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 138.66 90.376 205750000 0 0 0 14212000 16852000 16975000 17698000 12954000 0 25346000 17376000 24931000 22731000 12778000 23894000 35973 2786 32287 300280;300281;300282;300283;300284;300285;300286;300287;300288;300289;300290;300291 237705;237706;237707;237708;237709;237710;237711;237712;237713;237714;237715;237716;237717 237715 4423 11 MQAGEEVTELRRK Unmodified 1545.7933 0.79332505 2786 Q5T8P6 RBM26 RNA-binding protein 26 yes yes 0 0 2 By MS/MS 2 0 1 1 41.183 34.503 3 0.0065965 47716 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.114 66.51 35295000 35295000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35974 2786 32288 300292 237718 237718 0 MQAQMQMQMQGGDGDGGALGHHV 4 Oxidation (M) 2446.9722 0.97224676 2474 Q15019 SEPT2 Septin-2 yes yes 0 4 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 26.714 26.675 3 2.3021E-14 28386 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 73.11 70.571 12562000 0 0 0 2806300 2511100 0 0 0 0 0 7244500 0 0 0 0 35975 2474 32289 300293;300294;300295 237719 237719 4072;4073;4074;4075 1 MQASIEK Unmodified 805.40039 0.4003891 830 P06748 NPM1 Nucleophosmin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.44 3.26 1 2 13 2 1 1 1 1 1 1 1 1 2 1 1 1 1 21.452 21.441 2 0.017603 18732 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.54 60.032 9803200000 361190000 6314300000 0 152460000 129930000 106510000 208830000 183930000 117310000 207130000 526270000 322640000 392270000 386070000 394350000 35976 830 32290 300296;300297;300298;300299;300300;300301;300302;300303;300304;300305;300306;300307;300308;300309;300310;300311 237720;237721;237722;237723;237724;237725;237726;237727;237728;237729;237730;237731;237732;237733;237734;237735;237736;237737;237738 237723 19 MQASIEK Oxidation (M) 821.3953 0.39530372 830 P06748 NPM1 Nucleophosmin yes yes 0 1 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 2 1 1 2 7.1405 7.2885 2 0.01539 4261 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 89.296 44.685 861630000 0 0 0 0 53907000 44218000 57200000 48931000 51308000 82655000 0 174800000 101230000 105600000 141770000 35977 830 32290 300312;300313;300314;300315;300316;300317;300318;300319;300320;300321;300322;300323 237739;237740;237741;237742 237741 1012 4 MQASPEYQDYVYLEGTQK Oxidation (M) 2164.9623 0.96230045 4615 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 yes yes 0 1 0 By MS/MS 2 0 1 1 76.453 71.616 2 1.2624E-28 89523 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.71 117.17 18178000 0 18178000 0 0 0 0 0 0 0 0 0 0 0 0 0 35978 4615 32291 300324 237743 237743 6016 1 MQASPEYQDYVYLEGTQK Unmodified 2148.9674 0.96738583 4615 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 yes yes 0 0 0 By MS/MS 2 0 2 2 78.778 74.043 2;3 3.0683E-58 92225 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 203.29 189.61 89808000 0 89808000 0 0 0 0 0 0 0 0 0 0 0 0 0 35979 4615 32291 300325;300326 237744;237745 237744 1 MQAVQEATR Unmodified 1032.5022 0.50222841 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 17.916 18.012 2 0.0035091 18476 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 107.57 87.015 83822000 0 0 0 13230000 6930900 7976500 5929600 7802000 8239700 9672500 12724000 0 11317000 0 0 35980 2501 32292 300327;300328;300329;300330;300331;300332;300333;300334;300335 237746;237747;237748;237749;237750;237751;237752;237753 237753 6 MQAVQEATRLK Unmodified 1273.6813 0.6812554 2501 Q15149 PLEC Plectin yes yes 0 0 1 By MS/MS By matching 2 0 2 1 1 41.324 36.153 3 0.019566 49712 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.28 24.989 91911000 85710000 0 6200200 0 0 0 0 0 0 0 0 0 0 0 0 35981 2501 32293 300336;300337 237754 237754 1 MQAVQEATRLK Oxidation (M) 1289.6762 0.67617003 2501 Q15149 PLEC Plectin yes yes 0 1 1 By MS/MS 2 0 1 1 27.756 24.65 3 0.015197 31303 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 51.252 41.247 6920200 0 0 6920200 0 0 0 0 0 0 0 0 0 0 0 0 35982 2501 32293 300338 237755 237755 4106 1 MQDAENVAVPEAAEER Acetyl (Protein N-term);Oxidation (M) 1815.7945 0.79450684 1776 P55884 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 1 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.697 58.811 2 4.0883E-11 66887 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 92.925 89.604 69516000 0 0 0 5000400 3873700 5044100 4155600 3628900 3960600 4799600 7845200 7087700 9230100 5646200 9244200 35983 1776 32294 300339;300340;300341;300342;300343;300344;300345;300346;300347;300348;300349;300350 237756;237757;237758;237759;237760;237761;237762;237763;237764;237765;237766 237762 2898 11 MQDAENVAVPEAAEER Acetyl (Protein N-term) 1799.7996 0.79959222 1776 P55884 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 72.66 72.719 2 1.061E-20 83795 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 137.84 123.16 105960000 0 0 0 5853900 4920600 9628700 4499300 6099400 4803900 0 11319000 15162000 7195100 11729000 24748000 35984 1776 32294 300351;300352;300353;300354;300355;300356;300357;300358;300359;300360;300361 237767;237768;237769;237770;237771;237772;237773;237774;237775;237776;237777 237771 11 MQDDSIEASTSISQLLR Acetyl (Protein N-term);Oxidation (M) 1950.9204 0.92043564 3134 Q86TC9 MYPN Myopalladin yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 90.594 90.687 2 4.5607E-37 105268 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 128.31 117.41 16612000 0 0 0 0 1609300 0 1219800 0 0 4083200 3844800 2982900 0 0 2872300 35985 3134 32295 300362;300363;300364;300365;300366;300367 237778;237779;237780;237781;237782;237783;237784;237785 237779 4757 8 MQDIPEETESR Oxidation (M) 1349.5769 0.57690949 3693 Q92974 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 26.212 26.434 2 0.00047798 27160 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.662 72.697 38414000 0 0 0 3255200 2690900 4367000 0 0 1875500 3334600 5337500 5713700 5583100 3337500 2918700 35986 3693 32296 300368;300369;300370;300371;300372;300373;300374;300375;300376;300377 237786;237787;237788;237789;237790;237791;237792;237793;237794 237788 5261 9 MQDIPEETESRDGEAVASES Oxidation (M) 2194.9172 0.91720075 3693 Q92974 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 43.717 43.902 2 2.5347E-65 49069 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 148.57 143.94 208060000 0 0 0 16149000 16872000 14912000 0 11287000 20783000 22493000 27519000 29466000 18510000 13276000 16795000 35987 3693 32297 300378;300379;300380;300381;300382;300383;300384;300385;300386;300387;300388 237795;237796;237797;237798;237799;237800;237801;237802;237803;237804;237805;237806 237796 5261 12 MQDIPEETESRDGEAVASES Unmodified 2178.9223 0.92228613 3693 Q92974 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 49.469 49.696 2 1.0716E-45 55767 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 133.48 125.93 219890000 0 0 0 0 14809000 21696000 16499000 27096000 17330000 19505000 19882000 27090000 13225000 18537000 24220000 35988 3693 32297 300389;300390;300391;300392;300393;300394;300395;300396;300397;300398;300399 237807;237808;237809;237810;237811;237812;237813;237814;237815;237816;237817 237816 11 MQDPNADTEWNDILRK Acetyl (Protein N-term) 1986.9105 0.91053965 4368 Q9H2J4 PDCL3 Phosducin-like protein 3 yes yes 1 0 1 By MS/MS 2.5 0.5 1 1 2 86.267 82.251 2 2.6961E-52 102108 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 166.62 155.7 81322000 0 81322000 0 0 0 0 0 0 0 0 0 0 0 0 0 35989 4368 32298 300400;300401 237818;237819 237818 2 MQDTVVLAQGK Unmodified 1188.6173 0.61725816 3180 Q86W92 PPFIBP1 Liprin-beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 43.555 43.289 2 1.2389E-28 48577 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 177.36 107.76 670760000 0 135420000 0 26607000 26066000 28943000 35176000 35426000 27259000 50229000 71506000 78910000 45743000 26804000 82668000 35990 3180 32299 300402;300403;300404;300405;300406;300407;300408;300409;300410;300411;300412;300413;300414 237820;237821;237822;237823;237824;237825;237826;237827;237828;237829;237830;237831;237832;237833 237828 11 MQDTVVLAQGK Oxidation (M) 1204.6122 0.61217279 3180 Q86W92 PPFIBP1 Liprin-beta-1 yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 33.915 34.225 2 0.0019669 36351 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 65.157 44.828 21944000 0 0 0 0 0 0 0 0 0 0 0 0 0 21944000 0 35991 3180 32299 300415;300416 237834;237835 237835 4804 2 MQDVQGPR Acetyl (Protein N-term);Oxidation (M) 987.44438 0.44437918 4780 Q9NZQ8 TRPM5 Transient receptor potential cation channel subfamily M member 5 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 14.732 14.801 2 0.0087735 14300 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 43 25.015 34709000 0 0 0 3651700 3362500 4493200 3595100 0 5845000 0 0 8379100 5382400 0 0 35992 4780 32300 300417;300418;300419;300420;300421;300422;300423 237836 237836 6151 1 MQEAMTQEVSDVFSDTTTPIK 2 Oxidation (M) 2389.0665 0.066507525 1073 P18206 VCL Vinculin yes yes 0 2 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 1 2 2 2 2 2 2 1 2 2 76.721 76.815 2;3 4.7576E-48 88697 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 115.39 111.21 252830000 0 0 0 7430600 5307200 38045000 15976000 11230000 0 30791000 39329000 29017000 6527700 23170000 46006000 35993 1073 32301 300424;300425;300426;300427;300428;300429;300430;300431;300432;300433;300434;300435;300436;300437;300438;300439;300440;300441;300442 237837;237838;237839;237840;237841;237842;237843;237844;237845 237838 1528;1529 8 MQEAMTQEVSDVFSDTTTPIK Oxidation (M) 2373.0716 0.071592903 1073 P18206 VCL Vinculin yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 83.938 84.084 2;3 3.0083E-63 97077 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 138.39 133.09 10223000 0 0 0 0 0 0 0 0 0 4637200 0 0 0 0 5585400 35994 1073 32301 300443;300444 237846;237847 237847 1528;1529 1 MQEAMTQEVSDVFSDTTTPIK Unmodified 2357.0767 0.076678281 1073 P18206 VCL Vinculin yes yes 0 0 0 By MS/MS 2 0 2 2 89.754 84.881 2;3 5.7448E-86 105457 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 194.58 187.03 49503000 0 49503000 0 0 0 0 0 0 0 0 0 0 0 0 0 35995 1073 32301 300445;300446 237848;237849 237848 2 MQEEEARK Unmodified 1019.4706 0.47059393 2381 Q14160 SCRIB Protein scribble homolog yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 5.6613 2.3604 2 0.043314 3761 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 104.45 24.851 33015000 0 33015000 0 0 0 0 0 0 0 0 0 0 0 0 0 35996 2381 32302 300447;300448 237850 237850 1 MQEENITR Oxidation (M) 1035.4655 0.46550855 1087 P19388 POLR2E DNA-directed RNA polymerases I, II, and III subunit RPABC1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 11.536 11.671 2 0.0085933 10097 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.248 14.331 42262000 0 0 0 0 3011400 4514700 4943700 2752200 3673200 3860300 0 9083800 3308700 0 7113800 35997 1087 32303 300449;300450;300451;300452;300453;300454;300455;300456;300457 237851;237852;237853;237854 237854 1563 4 MQEGEGHSQLCLDR Unmodified 1658.7141 0.71408845 3538 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 34.708 34.742 3 0.0082547 38138 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 38.189 34.129 27428000 0 0 0 2505500 2402600 0 2626700 3102600 1925900 4994900 0 0 4587300 5282300 0 35998 3538 32304 300458;300459;300460;300461;300462;300463;300464;300465 237855 237855 1 MQEHSDQVPVGNIPR Unmodified 1705.8206 0.82060243 1334 P33993 MCM7 DNA replication licensing factor MCM7 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.869 47.035 3 0.00087492 51838 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.662 48.27 296300000 0 0 0 12340000 9549800 30643000 15333000 13853000 11414000 34108000 30933000 35942000 17847000 18520000 65812000 35999 1334 32305 300466;300467;300468;300469;300470;300471;300472;300473;300474;300475;300476;300477 237856;237857;237858;237859;237860;237861;237862;237863;237864;237865 237859 9 MQEIIASVDHIK Acetyl (Protein N-term);Oxidation (M) 1440.7283 0.72826518 677 O95639 CPSF4 Cleavage and polyadenylation specificity factor subunit 4 yes yes 1 1 0 By MS/MS By MS/MS 2 0 2 1 1 82.359 78.754 2 0.00079615 97735 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.507 68.254 16723000 0 14842000 1880500 0 0 0 0 0 0 0 0 0 0 0 0 36000 677 32306 300478;300479 237866 237866 819 1 MQEIIASVDHIK Acetyl (Protein N-term) 1424.7334 0.73335055 677 O95639 CPSF4 Cleavage and polyadenylation specificity factor subunit 4 yes yes 1 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 96.702 94.408 2 1.5305E-05 116267 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.47 96.841 60978000 0 58682000 0 0 0 0 0 0 0 0 0 0 0 0 2295700 36001 677 32306 300480;300481 237867;237868 237867 2 MQELLMAHDFTK Unmodified 1462.6949 0.69485656 4777 Q9NZN4 EHD2 EH domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 77.507 71.024 2;3 0.014493 92157 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.951 45.255 35324000 8598400 26725000 0 0 0 0 0 0 0 0 0 0 0 0 0 36002 4777 32307 300482;300483 237869;237870 237870 2 MQELLMAHDFTK 2 Oxidation (M) 1494.6847 0.6846858 4777 Q9NZN4 EHD2 EH domain-containing protein 2 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS 2 0 4 1 1 2 57.765 52.308 3 0.0056171 65498 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 50.897 36.544 66477000 9302600 13399000 43775000 0 0 0 0 0 0 0 0 0 0 0 0 36003 4777 32307 300484;300485;300486;300487 237871;237872 237871 6143;6144 1 MQELLMAHDFTK Oxidation (M) 1478.6898 0.68977118 4777 Q9NZN4 EHD2 EH domain-containing protein 2 yes yes 0 1 0 By MS/MS 2 0 1 1 66.807 63.064 3 0.0010394 78077 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 77.185 65.019 12662000 0 0 12662000 0 0 0 0 0 0 0 0 0 0 0 0 36004 4777 32307 300488 237873 237873 6143;6144 1 MQELLQTQDFSK Oxidation (M) 1482.7024 0.70244436 4403 Q9H4M9 EHD1 EH domain-containing protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.59 3.05 3 14 2 1 1 2 1 1 1 1 1 1 2 1 1 1 58.737 57.925 2 2.4588E-148 73179 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 252.97 224.05 291010000 0 164170000 0 6805900 9704300 13563000 11781000 0 5408600 14111000 12005000 15184000 8992100 11366000 17921000 36005 4403 32308 300489;300490;300491;300492;300493;300494;300495;300496;300497;300498;300499;300500;300501;300502;300503;300504;300505 237874;237875;237876;237877;237878;237879;237880;237881;237882;237883;237884;237885;237886;237887;237888 237877 5869 13 MQELLQTQDFSK Unmodified 1466.7075 0.70752973 4403 Q9H4M9 EHD1 EH domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 66.423 66.06 2 2.4389E-22 83648 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 163.84 146.02 446880000 0 359880000 0 3823200 3063200 9464300 4988900 5101400 3953700 8162400 9037100 8422600 6512200 7486000 16989000 36006 4403 32308 300506;300507;300508;300509;300510;300511;300512;300513;300514;300515;300516;300517;300518;300519 237889;237890;237891;237892;237893;237894;237895;237896;237897;237898;237899;237900;237901;237902 237892 14 MQELQEAQNAR Oxidation (M) 1332.6092 0.60921267 4867 Q9UDY2 TJP2 Tight junction protein ZO-2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.78 19.993 2 0.00019522 20249 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 90.15 73.374 29829000 0 0 0 3132000 2936600 3214500 0 2383500 1856100 2416300 3573100 5841300 0 2422900 2052500 36007 4867 32309 300520;300521;300522;300523;300524;300525;300526;300527;300528;300529;300530;300531 237903;237904;237905;237906;237907;237908;237909;237910;237911;237912;237913 237911 6217 11 MQELQEAQNAR Unmodified 1316.6143 0.61429805 4867 Q9UDY2 TJP2 Tight junction protein ZO-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.434 28.618 2 0.0007234 30776 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 77.677 56.776 49357000 0 0 0 4290300 2810500 2469300 3268400 2881100 2686700 8549300 6089700 6070700 4515300 0 5725400 36008 4867 32309 300532;300533;300534;300535;300536;300537;300538;300539;300540;300541;300542;300543 237914;237915;237916;237917;237918;237919;237920;237921;237922;237923;237924;237925 237916 12 MQELYGDGK Unmodified 1039.4644 0.46444592 360 O43719 HTATSF1 HIV Tat-specific factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 28.092 28.295 2 0.0039613 29180 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 88.37 73.531 165920000 0 0 0 5841800 8820400 8760500 10554000 0 0 11727000 22379000 25638000 14624000 24745000 32829000 36009 360 32310 300544;300545;300546;300547;300548;300549;300550;300551;300552;300553 237926;237927;237928;237929;237930;237931;237932;237933;237934 237930 9 MQELYGDGK Oxidation (M) 1055.4594 0.45936054 360 O43719 HTATSF1 HIV Tat-specific factor 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 19.288 19.454 2 0.003388 18662 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.287 55.033 53011000 0 0 0 3218300 2555200 2778300 4064300 2463800 2952400 5759100 0 7236000 7363900 6876900 7742700 36010 360 32310 300554;300555;300556;300557;300558;300559;300560;300561;300562;300563;300564 237935;237936;237937;237938;237939;237940;237941;237942;237943;237944 237937 461 10 MQEMIAR 2 Oxidation (M) 909.40482 0.40482255 2474 Q15019 SEPT2 Septin-2 yes yes 0 2 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 9.2861 9.4031 2 0.017799 6806 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 57.463 30.296 17852000 0 0 0 0 1882900 1282800 1673900 0 0 2302300 5637200 2964800 2108700 0 0 36011 2474 32311 300565;300566;300567;300568;300569;300570;300571 237945;237946 237945 4076;4077 2 MQEQLER Unmodified 932.43857 0.43856552 5278 Q9Y6D9 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 18.149 18.135 2 0.02218 18395 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 105.39 16.656 49948000 0 0 0 8228300 7003100 0 10600000 12453000 11664000 0 0 0 0 0 0 36012 5278 32312 300572;300573;300574;300575;300576 237947;237948 237948 2 MQEQLER Oxidation (M) 948.43348 0.43348014 5278 Q9Y6D9 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes yes 0 1 0 By MS/MS 10 0 1 1 10.214 10.455 2 0.016932 8096 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 80.229 21.248 9856400 0 0 0 0 0 0 0 0 0 0 0 0 0 9856400 0 36013 5278 32312 300577 237949 237949 6685 1 MQEQLERNRQCQQNLDAASK Unmodified 2446.1441 0.14413819 5278 Q9Y6D9 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes yes 0 0 2 By MS/MS 2 0 1 1 34.465 28.233 3 0.000326 39594 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.102 37.655 13113000 13113000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36014 5278 32313 300578 237950 237950 1 MQEQQADLQR Oxidation (M) 1261.5721 0.57209888 2391 Q14203 DCTN1 Dynactin subunit 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 13.937 14.001 2 0.0056568 13444 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 91.867 74.627 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36015 2391 32314 300579;300580;300581;300582;300583 237951;237952;237953;237954;237955 237951 3892 5 MQEQQADLQR Unmodified 1245.5772 0.57718426 2391 Q14203 DCTN1 Dynactin subunit 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 20.951 19.992 2 4.2168E-06 19919 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 149.57 140.22 86799000 6340900 15750000 0 0 3886100 0 12208000 5163500 0 18464000 13504000 0 0 0 11482000 36016 2391 32314 300584;300585;300586;300587;300588;300589;300590;300591;300592 237956;237957;237958;237959;237960;237961;237962;237963;237964 237959 9 MQEQQADLQRR Oxidation (M) 1417.6732 0.67320991 2391 Q14203 DCTN1 Dynactin subunit 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 10.993 11.075 3 0.0010934 9497 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 61.353 45.814 27685000 0 0 0 4629200 1717900 2921000 2403500 1731900 1601400 0 0 5415900 3908500 3355300 0 36017 2391 32315 300593;300594;300595;300596;300597;300598;300599;300600;300601 237965 237965 3892 1 MQETLVGLELENER Oxidation (M) 1675.8087 0.80870034 5278 Q9Y6D9 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 75.448 75.533 2 2.9585E-14 86685 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 116.01 76.943 81133000 0 0 0 0 5142800 10930000 6981000 6764500 0 0 13964000 0 9487700 0 27863000 36018 5278 32316 300602;300603;300604;300605;300606;300607;300608 237966;237967;237968;237969;237970 237968 6686 3 MQETLVGLELENER Unmodified 1659.8138 0.81378572 5278 Q9Y6D9 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes yes 0 0 0 By MS/MS 10 0 1 1 78.706 78.952 2 0.019562 90836 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.423 21.41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36019 5278 32316 300609 237971 237971 1 MQEVDFLEQNEELQAVDSQK Unmodified 2379.09 0.090020159 4407 Q9H582 ZNF644 Zinc finger protein 644 yes yes 0 0 0 By MS/MS 2 0 1 1 85.481 80.706 3 1.0797E-08 100414 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 57.484 52.938 18525000 0 18525000 0 0 0 0 0 0 0 0 0 0 0 0 0 36020 4407 32317 300610 237972;237973 237973 2 MQEVVANLQYDDGSGMK 2 Oxidation (M) 1915.8292 0.82917779 2608 Q16531 DDB1 DNA damage-binding protein 1 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.8 3.37 1 2 7 1 2 1 1 1 1 1 1 1 53.393 51.963 2 1.1067E-53 65329 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 149.82 133.94 70557000 803010 31474000 0 0 3121400 0 4537800 0 0 5310200 6646300 6437600 0 5938700 6287400 36021 2608 32318 300611;300612;300613;300614;300615;300616;300617;300618;300619;300620 237974;237975;237976;237977;237978;237979;237980 237976 4256;4257 7 MQEVVANLQYDDGSGMK Oxidation (M) 1899.8343 0.83426316 2608 Q16531 DDB1 DNA damage-binding protein 1 yes yes 0 1 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 61.181 60.245 2 1.0891E-06 75076 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.651 87.346 250780000 0 197910000 0 2416600 0 2689000 0 0 0 4324800 6803800 9379600 4128000 7475100 15660000 36022 2608 32318 300621;300622;300623;300624;300625;300626;300627;300628;300629;300630 237981;237982;237983;237984;237985;237986;237987;237988 237982 4256;4257 8 MQEVVANLQYDDGSGMK Unmodified 1883.8393 0.83934854 2608 Q16531 DDB1 DNA damage-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.44 3.98 4 5 1 3 1 1 1 1 1 70.129 66.649 2;3 4.2295E-08 77175 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 98.531 90.427 150600000 4283700 126470000 0 0 0 0 0 0 0 0 4659900 0 0 3383200 11795000 36023 2608 32318 300631;300632;300633;300634;300635;300636;300637;300638;300639 237989;237990;237991;237992;237993;237994;237995;237996;237997 237997 7 MQFESSSYEGYFLACEK Oxidation (M) 2090.8601 0.86014356 2367 Q14116 IL18 Interleukin-18 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 82.276 78.274 2 8.4834E-63 97390 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 162.93 155.32 23090000 0 23090000 0 0 0 0 0 0 0 0 0 0 0 0 0 36024 2367 32319 300640;300641 237998;237999 237998 3854 2 MQFESSSYEGYFLACEK Unmodified 2074.8652 0.86522894 2367 Q14116 IL18 Interleukin-18 yes yes 0 0 0 By MS/MS 2 0 1 1 87.046 78.915 2 9.5442E-13 102893 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 131.53 123.46 17702000 17702000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36025 2367 32319 300642 238000;238001 238001 2 MQGDPDDTSHR Unmodified 1257.5044 0.50441325 3149 Q86UK7 ZNF598 Zinc finger protein 598 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 6.8726 7.0271 3 0.025395 5241 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 36.847 31.345 36200000 0 0 0 2792400 0 0 3035200 3932300 2243200 3358400 4916600 4091200 5097000 0 6733900 36026 3149 32320 300643;300644;300645;300646;300647;300648;300649;300650;300651 238002;238003 238003 2 MQGDPDDTSHR Oxidation (M) 1273.4993 0.49932787 3149 Q86UK7 ZNF598 Zinc finger protein 598 yes yes 0 1 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 5.6302 5.7605 3 0.0052227 3636 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 43.544 39.461 24498000 0 0 0 2567400 2720200 0 3041000 2367100 1981400 0 2442900 0 3647000 2482500 3248300 36027 3149 32320 300652;300653;300654;300655;300656;300657;300658;300659;300660 238004 238004 4770 1 MQGEDARYLK Acetyl (Protein N-term) 1251.5918 0.59177169 3671 Q92845 KIFAP3 Kinesin-associated protein 3 yes yes 1 0 1 By MS/MS 2.5 0.5 1 1 2 53.225 47.881 2 0.0019631 61900 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.523 71.568 30322000 0 30322000 0 0 0 0 0 0 0 0 0 0 0 0 0 36028 3671 32321 300661;300662 238005 238005 1 MQGQEAVLAMSSR 2 Oxidation (M) 1438.6544 0.65444831 2528 Q15393 SF3B3 Splicing factor 3B subunit 3 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 29.84 30.101 2 3.3219E-07 32484 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 93.258 77.004 39623000 0 0 0 0 2770500 0 2820400 3116800 766040 5728800 4441200 5859000 4876200 2944800 6299700 36029 2528 32322 300663;300664;300665;300666;300667;300668;300669;300670;300671;300672 238006;238007;238008;238009;238010;238011;238012;238013;238014 238012 4162;4163 9 MQGQEAVLAMSSR Unmodified 1406.6646 0.66461906 2528 Q15393 SF3B3 Splicing factor 3B subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 55.254 55.709 2 6.667E-05 62024 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.363 78.782 408840000 0 0 0 0 0 0 0 0 0 0 84707000 82463000 0 56242000 185430000 36030 2528 32322 300673;300674;300675;300676 238015;238016;238017;238018 238015 4 MQGQEAVLAMSSR Oxidation (M) 1422.6595 0.65953368 2528 Q15393 SF3B3 Splicing factor 3B subunit 3 yes yes 0 1 0 By MS/MS 10 0 1 1 47.136 47.371 2 0.0062126 52423 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 62.633 47.482 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36031 2528 32322 300677 238019 238019 4162;4163 1 MQGQSPPAPTR Unmodified 1168.5659 0.56589129 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 19.25 19.378 2 9.5328E-07 19485 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 132.88 109.45 93511000 0 0 0 7092900 7309600 10563000 7557000 11261000 7390600 14258000 10511000 17569000 0 0 0 36032 2361 32323 300678;300679;300680;300681;300682;300683;300684;300685;300686 238020;238021;238022;238023;238024;238025;238026;238027;238028;238029 238026 8 MQGQSPPAPTR Oxidation (M) 1184.5608 0.56080592 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14 14.163 2 0.00083847 13314 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 73.887 65.354 96428000 0 0 0 5264100 8478400 7136300 6919700 5131800 4917900 9042700 9528800 11934000 10632000 7222900 10219000 36033 2361 32323 300687;300688;300689;300690;300691;300692;300693;300694;300695;300696;300697;300698 238030;238031;238032;238033;238034;238035 238035 3847 3 MQGQSPPAPTRGISK Oxidation (M) 1569.7933 0.79332505 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 1 1 By MS/MS 2 0 1 1 28.534 23.015 3 0.012278 32438 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.983 31.696 12854000 12854000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36034 2361 32324 300699 238036 238036 3847 1 MQGQSPPAPTRGISK Unmodified 1553.7984 0.79841043 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 32.315 27.601 3 0.029965 38644 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 33.307 24.256 26445000 25216000 0 1229300 0 0 0 0 0 0 0 0 0 0 0 0 36035 2361 32324 300700;300701 238037 238037 1 MQGSITTPGSIALAQAQAQAQVPAK Oxidation (M) 2482.285 0.28497199 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.967 78.025 3 8.1619E-94 90073 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 144.22 140.27 333910000 0 0 0 9234200 31539000 37597000 21745000 26155000 21615000 35954000 28895000 39001000 21932000 31528000 28715000 36036 19 32325 300702;300703;300704;300705;300706;300707;300708;300709;300710;300711;300712;300713 238038;238039;238040;238041;238042;238043;238044;238045;238046;238047;238048;238049;238050 238050 19 13 MQGSITTPGSIALAQAQAQAQVPAK Unmodified 2466.2901 0.29005737 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 80.04 79.457 3 1.9739E-75 91985 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.259 87.536 108950000 16606000 0 0 0 6677300 7993700 4174500 8444000 3848000 10994000 8631400 11343000 3374200 8666400 18196000 36037 19 32325 300714;300715;300716;300717;300718;300719;300720;300721;300722;300723;300724;300725 238051;238052;238053;238054;238055;238056;238057;238058;238059;238060;238061;238062 238054 12 MQHLIAR Unmodified 867.47489 0.47489144 1000 P14618 PKM Pyruvate kinase PKM yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20 20.199 2 0.023118 21313 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 102.98 75.663 745960000 0 0 0 33300000 29926000 34122000 37019000 44717000 41370000 53750000 119890000 119190000 19604000 43630000 169440000 36038 1000 32326 300726;300727;300728;300729;300730;300731;300732;300733;300734;300735;300736;300737 238063;238064;238065;238066;238067;238068;238069;238070;238071;238072;238073 238063 7 MQHLIAR Oxidation (M) 883.46981 0.46980607 1000 P14618 PKM Pyruvate kinase PKM yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.27 13.425 2 0.02513 11861 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 122.98 98.792 634830000 0 0 0 34645000 33013000 38429000 49000000 39548000 39635000 46940000 88489000 77537000 27491000 45244000 114860000 36039 1000 32326 300738;300739;300740;300741;300742;300743;300744;300745;300746;300747;300748;300749 238074;238075;238076;238077 238076 1 MQHLNPDPQLIPEQITTDITPECLVSPR Oxidation (M) 3257.606 0.60604814 3735 Q96AC1 FERMT2 Fermitin family homolog 2 yes yes 0 1 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 94.745 91.226 3 1.6087E-09 110081 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 66.447 61.017 26835000 0 22223000 4612600 0 0 0 0 0 0 0 0 0 0 0 0 36040 3735 32327 300750;300751;300752 238078;238079;238080;238081;238082 238082 5308 5 MQHLNPDPQLIPEQITTDITPECLVSPR Unmodified 3241.6111 0.61113351 3735 Q96AC1 FERMT2 Fermitin family homolog 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 95.814 92.18 3 5.0836E-08 111207 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 59.691 54.261 28072000 0 26620000 1452000 0 0 0 0 0 0 0 0 0 0 0 0 36041 3735 32327 300753;300754 238083;238084 238084 2 MQHNLEQQIQAR Unmodified 1494.7361 0.73614452 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 34.789 34.963 3 1.6883E-05 37956 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 80.245 66.017 178230000 0 0 0 8499000 4608600 16596000 9938600 5967600 0 16828000 26750000 27571000 15810000 0 45664000 36042 2344 32328 300755;300756;300757;300758;300759;300760;300761;300762;300763;300764 238085;238086;238087;238088;238089;238090;238091;238092;238093;238094 238089 9 MQHNLEQQIQAR Oxidation (M) 1510.7311 0.73105914 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 1 0 By MS/MS 10 0 1 1 30.401 30.088 3 0.016569 32891 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 41.218 27.79 10254000 0 0 0 10254000 0 0 0 0 0 0 0 0 0 0 0 36043 2344 32328 300765 238095 238095 3811 0 MQHNVLVAEVTQQLK Oxidation (M) 1752.9193 0.91925384 2330 Q13618 CUL3 Cullin-3 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 81.105 74.684 3 0.00016135 96151 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.632 68.799 168840000 127600000 41236000 0 0 0 0 0 0 0 0 0 0 0 0 0 36044 2330 32329 300766;300767 238096;238097 238097 3797 2 MQHNVLVAEVTQQLK Unmodified 1736.9243 0.92433922 2330 Q13618 CUL3 Cullin-3 yes yes 0 0 0 By MS/MS 2 0 1 1 83.876 75.746 3 1.4271E-10 98871 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.439 88.69 92603000 92603000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36045 2330 32329 300768 238098 238098 1 MQHVSSSQSSQR Acetyl (Protein N-term) 1402.6259 0.62592537 3015 Q6ZTU2 EP400NL EP400 N-terminal-like protein yes yes 1 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 18.907 19.149 2 0.0019046 18393 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.79 42.266 6189000 0 0 0 0 0 1250000 0 0 0 1723200 0 0 0 0 3215800 36046 3015 32330 300769;300770;300771 238099 238099 1 MQILQAVQTNELAFDNAK Oxidation (M) 2049.0201 0.0200901 2604 Q16513 PKN2 Serine/threonine-protein kinase N2 yes yes 0 1 0 By MS/MS 10 0 1 1 80.493 80.59 2 5.2965E-05 93131 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 63.76 48.373 9338500 0 0 0 0 0 0 0 0 0 9338500 0 0 0 0 0 36047 2604 32331 300772 238100 238100 4247 1 MQLAAESLQEADK Unmodified 1432.6868 0.68679429 2005 P83436 COG7 Conserved oligomeric Golgi complex subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 55.961 56.163 2 0.00065043 62958 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.46 66.225 46599000 0 0 0 0 2149700 4850200 3075200 4075300 0 4618100 5309400 10199000 3287800 3883700 5150300 36048 2005 32332 300773;300774;300775;300776;300777;300778;300779;300780;300781;300782 238101;238102;238103;238104;238105;238106;238107;238108;238109 238104 9 MQLACDDLK Unmodified 1092.4944 0.49436584 3341 Q8N584 TTC39C Tetratricopeptide repeat protein 39C yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 49.627 44.33 2 0.016312 57404 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 111.74 88.848 143630000 0 143630000 0 0 0 0 0 0 0 0 0 0 0 0 0 36049 3341 32333 300783;300784 238110 238110 0 MQLDNPSK Unmodified 931.44332 0.44331654 2231 Q13085 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 23.448 23.093 2 0.010113 28771 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.5 89.976 275270000 0 231550000 0 3697800 4077200 5192800 4440200 3543000 2297500 6826200 0 0 6443000 7204500 0 36050 2231 32334 300785;300786;300787;300788;300789;300790;300791;300792;300793;300794 238111;238112;238113 238112 3 MQLEVEK Unmodified 875.44225 0.44225391 4995 Q9ULH7 MKL2 MKL/myocardin-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 35.81 36.067 2 0.023797 38530 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 84.097 12.956 70697000 0 0 0 0 4233400 4044300 0 5667400 3489000 8106400 7058200 8728900 8335100 8140100 12894000 36051 4995 32335 300795;300796;300797;300798;300799;300800;300801;300802;300803;300804 238114;238115;238116;238117 238116 4 MQLLEIITTEK Unmodified 1317.7214 0.72138888 1426 P40939 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 0 0 0 By MS/MS 2 0 1 1 93.369 85.239 2 0.0034112 110374 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.831 62.834 8263900 8263900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36052 1426 32336 300805 238118 238118 1 MQLLQSLQEQK Oxidation (M) 1360.7021 0.70205043 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 56.037 56.166 2 0.00019305 62629 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.263 59.699 104430000 0 0 0 5671700 8558100 6878300 0 9323300 9102600 10545000 9947100 15897000 10816000 7781800 9906400 36053 2556 32337 300806;300807;300808;300809;300810;300811;300812;300813;300814;300815;300816 238119;238120;238121;238122;238123;238124;238125;238126;238127;238128;238129 238121 4202 10 MQLLQSLQEQK Unmodified 1344.7071 0.7071358 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 70.918 70.361 2 0.00026955 80095 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 92.239 70.669 153890000 9183500 0 0 4852600 6360500 10753000 10566000 11667000 12149000 11428000 13108000 13066000 11469000 14276000 25009000 36054 2556 32337 300817;300818;300819;300820;300821;300822;300823;300824;300825;300826;300827;300828;300829 238130;238131;238132;238133;238134;238135;238136;238137;238138;238139 238132 10 MQLSEIMER Unmodified 1135.5366 0.536565 1970 P78316 NOP14 Nucleolar protein 14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 68.758 68.884 2 0.0089221 79276 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 68.224 37.969 25600000 0 0 0 0 2359300 3249200 0 2266200 0 0 0 4215100 2816900 4018000 6675600 36055 1970 32338 300830;300831;300832;300833;300834;300835;300836 238140;238141;238142 238140 3 MQLWLNDPNNVEK Unmodified 1599.7715 0.77152697 1406 P39880 CUX1 Homeobox protein cut-like 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 76.427 76.456 2 0.0022461 88640 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 59.542 42.106 72025000 0 0 0 2706300 3887800 6508900 4643400 9558300 7063400 0 9133000 0 6034100 0 22490000 36056 1406 32339 300837;300838;300839;300840;300841;300842;300843;300844;300845 238143;238144;238145;238146;238147;238148;238149;238150 238148 8 MQMELSHK Unmodified 1002.4627 0.46267178 5278 Q9Y6D9 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes yes 0 0 0 By MS/MS By matching By MS/MS 2 0 3 1 1 1 28.799 24.425 2 0.031244 30808 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 75.213 55.736 47382000 29424000 12934000 5024200 0 0 0 0 0 0 0 0 0 0 0 0 36057 5278 32340 300846;300847;300848 238151 238151 1 MQMLEDEDDLAYAETEK 2 Oxidation (M) 2061.8395 0.8394677 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.12 2.42 1 1 15 2 2 1 1 1 2 2 2 1 2 1 59.754 59.582 2 7.3149E-32 67852 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 120.14 112.03 73991000 0 2960300 0 0 8765600 7006600 6190700 0 3051700 8692400 5258800 13851000 5860300 7831100 4522300 36058 2392 32341 300849;300850;300851;300852;300853;300854;300855;300856;300857;300858;300859;300860;300861;300862;300863;300864;300865 238152;238153;238154;238155;238156;238157;238158;238159;238160;238161;238162 238161 3911;3912 11 MQMLEDEDDLAYAETEK Oxidation (M) 2045.8446 0.84455308 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 1 0 By MS/MS 2.33 0.471 2 1 3 71.594 66.435 2 2.0405E-203 84446 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 250.8 234.64 41074000 0 41074000 0 0 0 0 0 0 0 0 0 0 0 0 0 36059 2392 32341 300866;300867;300868 238163;238164;238165 238164 3911;3912 3 MQMLEDEDDLAYAETEK Unmodified 2029.8496 0.84963846 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 78.017 72.556 2 3.8728E-203 91465 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 249.19 236.38 234850000 11104000 223740000 0 0 0 0 0 0 0 0 0 0 0 0 0 36060 2392 32341 300869;300870;300871 238166;238167;238168 238166 3 MQNDAGEFVDLYVPR Acetyl (Protein N-term);Oxidation (M) 1810.8196 0.81959938 1948 P63220 RPS21 40S ribosomal protein S21 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 89.447 89.584 2 9.3358E-21 103721 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 111.79 105.79 20239000 0 0 0 0 0 0 0 0 0 1439700 4362300 3817900 0 3521300 7098100 36061 1948 32342 300872;300873;300874;300875;300876 238169;238170;238171;238172;238173 238170 3128 5 MQNDAGEFVDLYVPRK Acetyl (Protein N-term);Oxidation (M) 1938.9146 0.9145624 1948 P63220 RPS21 40S ribosomal protein S21 yes yes 1 1 1 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.43 3.02 1 2 11 3 1 1 1 1 1 2 2 2 82.747 81.972 2;3 6.1459E-60 94791 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 176.51 170.28 816690000 0 654750000 0 0 1393200 0 1747400 1321700 0 5094500 10364000 9221600 0 29402000 103400000 36062 1948 32343 300877;300878;300879;300880;300881;300882;300883;300884;300885;300886;300887;300888;300889;300890 238174;238175;238176;238177;238178;238179;238180 238175 3128 7 MQNDAGEFVDLYVPRK Acetyl (Protein N-term) 1922.9196 0.91964777 1948 P63220 RPS21 40S ribosomal protein S21 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.78 3.71 5 1 3 1 3 2 1 1 1 89.025 86.186 2;3 1.3003E-51 107121 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 196.5 188.63 1111300000 50621000 1022800000 14910000 0 0 0 0 0 0 0 3623000 0 0 1754400 17648000 36063 1948 32343 300891;300892;300893;300894;300895;300896;300897;300898;300899 238181;238182;238183;238184;238185;238186;238187 238182 5 MQNDTAENETTEK Oxidation (M) 1525.6202 0.62023087 2117 Q05682 CALD1 Caldesmon yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.0501 7.1737 2 2.7156E-16 4654 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 149.96 146.29 67110000 0 0 0 1761900 2845000 2768900 3562000 3734500 4618200 5867700 11185000 7542500 6627300 6544700 10052000 36064 2117 32344 300900;300901;300902;300903;300904;300905;300906;300907;300908;300909;300910;300911 238188;238189;238190;238191;238192;238193;238194;238195;238196;238197;238198;238199 238191 3422 12 MQNDTAENETTEK Unmodified 1509.6253 0.62531625 2117 Q05682 CALD1 Caldesmon yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 10.197 10.334 2 1.7551E-08 9239 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 126.67 122.37 100240000 0 0 0 4672400 3574300 4015100 4909900 4645700 3149400 6443300 12944000 15591000 9216800 11608000 19470000 36065 2117 32344 300912;300913;300914;300915;300916;300917;300918;300919;300920;300921;300922;300923 238200;238201;238202;238203;238204;238205;238206;238207;238208;238209;238210 238202 11 MQNNSSPSISPNTSFTSDGSPSPLGGIK Oxidation (M) 2822.3029 0.30286648 4323 Q9H0D6 XRN2 5'-3' exoribonuclease 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 77.847 77.893 3 1.8794E-60 89937 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 104.89 98.723 219990000 0 0 0 13292000 13907000 21780000 14208000 0 16945000 22579000 22513000 23884000 18881000 18757000 33242000 36066 4323 32345 300924;300925;300926;300927;300928;300929;300930;300931;300932;300933;300934 238211;238212;238213;238214;238215;238216;238217;238218;238219;238220;238221;238222;238223;238224 238212 5787 14 MQNNSSPSISPNTSFTSDGSPSPLGGIK Unmodified 2806.308 0.30795186 4323 Q9H0D6 XRN2 5'-3' exoribonuclease 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 78.692 78.627 3 0.0090671 90946 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 20.285 13.708 27043000 0 0 0 0 3981100 8138800 0 0 0 14923000 0 0 0 0 0 36067 4323 32345 300935;300936;300937 238225;238226;238227 238226 2 MQNVINTVK Acetyl (Protein N-term) 1087.5696 0.56957969 4632 Q9NT62 ATG3 Ubiquitin-like-conjugating enzyme ATG3 yes yes 1 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.62 3.25 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 82.141 82.654 2 0.00084213 90422 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 115.49 67.578 494960000 44671000 151490000 0 15759000 15481000 30423000 24734000 21856000 0 27675000 38401000 34822000 22842000 27033000 39771000 36068 4632 32346 300938;300939;300940;300941;300942;300943;300944;300945;300946;300947;300948;300949;300950 238228;238229;238230;238231;238232;238233;238234;238235 238230 8 MQNVINTVK Acetyl (Protein N-term);Oxidation (M) 1103.5645 0.56449431 4632 Q9NT62 ATG3 Ubiquitin-like-conjugating enzyme ATG3 yes yes 1 1 0 By MS/MS 1 0 1 1 102.55 107.81 2 0.03111 87739 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 49.715 22.753 7392400 7392400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36069 4632 32346 300951 238236 238236 1 MQPASAK Acetyl (Protein N-term);Oxidation (M) 789.36909 0.36908897 2506 Q15185 PTGES3 Prostaglandin E synthase 3 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.33 3.93 6 1 8 3 2 2 1 1 1 1 1 1 1 1 7.1613 6.4264 2 0.0069585 4612 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.981 22.394 255800000 44011000 24238000 8782100 5652300 0 0 0 0 11757000 26173000 43440000 15823000 22592000 21937000 31400000 36070 2506 32347 300952;300953;300954;300955;300956;300957;300958;300959;300960;300961;300962;300963;300964;300965;300966 238237;238238;238239;238240;238241;238242;238243;238244;238245;238246;238247;238248;238249;238250 238241 4112 10 MQPASAK Acetyl (Protein N-term) 773.37417 0.37417435 2506 Q15185 PTGES3 Prostaglandin E synthase 3 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.61 1.84 1 22 1 2 2 2 2 1 2 2 2 1 2 2 2 22.311 22.713 1;2 0.0032555 18698 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 111.82 70.314 491710000 26559000 0 0 16490000 27080000 30427000 31576000 26581000 22463000 42619000 64109000 31178000 51994000 34030000 86609000 36071 2506 32347 300967;300968;300969;300970;300971;300972;300973;300974;300975;300976;300977;300978;300979;300980;300981;300982;300983;300984;300985;300986;300987;300988;300989 238251;238252;238253;238254;238255;238256;238257;238258;238259;238260;238261 238256 4 MQPDQQVVINCAIVR Unmodified 1769.8917 0.89165888 1629 P50552 VASP Vasodilator-stimulated phosphoprotein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 73.139 73.037 2 0.001385 84132 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 58.37 20.757 19342000 0 0 0 2657700 0 6189800 0 0 0 0 0 10494000 0 0 0 36072 1629 32348 300990;300991;300992 238262;238263;238264 238262 3 MQPDQQVVINCAIVR Oxidation (M) 1785.8866 0.88657351 1629 P50552 VASP Vasodilator-stimulated phosphoprotein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 67.776 68.081 2 0.0011425 77270 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 50.284 32.475 24995000 0 0 0 0 0 0 0 0 0 0 0 13299000 0 11696000 0 36073 1629 32348 300993;300994;300995 238265;238266 238266 2612 2 MQPDQQVVINCAIVRGVK Unmodified 2054.0765 0.076499542 1629 P50552 VASP Vasodilator-stimulated phosphoprotein yes yes 0 0 1 By MS/MS 2 0 1 1 79.804 71.673 3 0.00010786 94144 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.246 44.992 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36074 1629 32349 300996 238267 238267 1 MQQAGMALYK 2 Oxidation (M) 1171.5366 0.536565 2465 Q14CX7 NAA25 N-alpha-acetyltransferase 25, NatB auxiliary subunit yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By matching By matching 10 0 5 1 1 1 1 1 22.638 22.863 2 0.00029716 23786 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 114.2 85.984 167140000 0 0 0 0 0 0 54556000 47232000 55213000 3023800 0 7111000 0 0 0 36075 2465 32350 300997;300998;300999;301000;301001 238268;238269;238270 238270 4061;4062 3 MQQAGMALYK Oxidation (M) 1155.5417 0.54165038 2465 Q14CX7 NAA25 N-alpha-acetyltransferase 25, NatB auxiliary subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 2 2 2 1 1 1 32.214 32.439 2 0.00086738 41715 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 107.66 88.882 433010000 0 0 0 0 0 0 154120000 131000000 137480000 2040100 3380500 4995600 0 0 0 36076 2465 32350 301002;301003;301004;301005;301006;301007;301008;301009;301010 238271;238272;238273;238274;238275;238276;238277;238278 238275 4061;4062 7 MQQAGMALYK Unmodified 1139.5467 0.54673576 2465 Q14CX7 NAA25 N-alpha-acetyltransferase 25, NatB auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 46.341 44.615 2 5.9779E-06 57587 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 144.38 117.41 463200000 8237200 90715000 0 0 0 0 99438000 126630000 113310000 0 12462000 12406000 0 0 0 36077 2465 32350 301011;301012;301013;301014;301015;301016;301017 238279;238280;238281;238282 238279 4 MQQHEQALADCRR Oxidation (M) 1657.7413 0.74130625 5029 Q9UNE7 STUB1 E3 ubiquitin-protein ligase CHIP yes yes 0 1 1 By MS/MS 2 0 1 1 14.606 10.557 3 0.004942 15754 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.467 35.053 22407000 22407000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36078 5029 32351 301018 238283 238283 6369 1 MQQHEQALADCRR Unmodified 1641.7464 0.74639163 5029 Q9UNE7 STUB1 E3 ubiquitin-protein ligase CHIP yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 8.67 2.98 1 5 1 1 1 1 1 1 14.487 14.028 3 0.0058 12556 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 49.448 36.035 53208000 30137000 0 0 0 0 0 0 0 0 0 3541800 5041600 1406700 3003000 10078000 36079 5029 32351 301019;301020;301021;301022;301023;301024 238284;238285 238285 2 MQQHFEFEYQTK Oxidation (M) 1630.7086 0.70859237 864 P08243 ASNS Asparagine synthetase [glutamine-hydrolyzing] yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 56.78 50.805 3 0.000554 69098 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.169 77.762 92937000 54724000 16733000 21480000 0 0 0 0 0 0 0 0 0 0 0 0 36080 864 32352 301025;301026;301027 238286;238287;238288 238287 1107 2 MQQHFEFEYQTK Unmodified 1614.7137 0.71367774 864 P08243 ASNS Asparagine synthetase [glutamine-hydrolyzing] yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 62.47 56.434 3 0.045892 76160 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.613 35.014 40474000 37940000 0 2533500 0 0 0 0 0 0 0 0 0 0 0 0 36081 864 32352 301028;301029 238289 238289 0 MQQLNAAHQEALMK Unmodified 1611.7861 0.78613118 4260 Q9BZD4 NUF2 Kinetochore protein Nuf2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 50.358 44.471 3 0.0050712 55799 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 49.149 41.605 82966000 54133000 20050000 8783200 0 0 0 0 0 0 0 0 0 0 0 0 36082 4260 32353 301030;301031;301032 238290;238291 238291 2 MQQLNAAHQEALMK 2 Oxidation (M) 1643.776 0.77596042 4260 Q9BZD4 NUF2 Kinetochore protein Nuf2 yes yes 0 2 0 By MS/MS 2 0 1 1 31.471 25.627 3 1 NaN NaN 20384000 20384000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36083 4260 32353 301033 0 MQQNIQELEEQLEEEESAR Oxidation (M) 2348.0438 0.043798248 1356 P35579 MYH9 Myosin-9 yes yes 0 1 0 By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 2 2 1 1 1 1 1 2 2 1 2 82.201 82.255 2;3 6.9444E-65 95151 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 160.31 155.51 438500000 0 0 0 1839400 37342000 44780000 4813700 6943600 4884500 21376000 19072000 71516000 18265000 51999000 155670000 36084 1356 32354 301034;301035;301036;301037;301038;301039;301040;301041;301042;301043;301044;301045;301046;301047;301048;301049;301050 238292;238293;238294;238295;238296;238297;238298;238299 238293 2085 8 MQQNIQELEEQLEEEESAR Unmodified 2332.0489 0.048883626 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 84.365 84.544 3 5.0397E-06 97549 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.747 65.226 11808000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11808000 36085 1356 32354 301051;301052 238300;238301 238301 2 MQQNIQELEEQLEEEESARQK Oxidation (M) 2604.1973 0.19733878 1356 P35579 MYH9 Myosin-9 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.65 3.65 5 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 78.978 78.116 3 1.1124E-288 90378 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 240.42 233.03 918970000 74119000 82534000 73565000 9213600 23057000 54796000 14419000 50778000 56342000 116110000 57377000 83688000 25891000 39112000 157970000 36086 1356 32355 301053;301054;301055;301056;301057;301058;301059;301060;301061;301062;301063;301064;301065;301066;301067;301068;301069 238302;238303;238304;238305;238306;238307;238308;238309;238310;238311;238312;238313;238314;238315;238316;238317;238318 238303 2085 17 MQQNIQELEEQLEEEESARQK Unmodified 2588.2024 0.20242415 1356 P35579 MYH9 Myosin-9 yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 81.458 80.539 3 1.4289E-119 100384 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 187.33 176.93 204770000 0 134370000 37310000 0 0 0 0 3160800 2397900 5977700 0 0 0 1981100 19563000 36087 1356 32355 301070;301071;301072;301073;301074;301075;301076 238319;238320;238321;238322;238323 238321 5 MQQPQISVYSGSDR Unmodified 1594.741 0.74095513 3419 Q8NDX5 PHC3 Polyhomeotic-like protein 3 yes yes 0 0 0 By MS/MS 10 0 1 1 53.857 54.515 2 0.006262 60788 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.628 27.49 10965000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10965000 36088 3419 32356 301077 238324 238324 1 MQQQLDEYQELLDIK Oxidation (M) 1908.9139 0.91389369 757 P02545 LMNA Prelamin-A/C;Lamin-A/C yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.83 3.5 4 1 13 2 2 1 1 1 2 1 1 1 2 1 1 2 85.692 84.762 2;3 4.0524E-259 105089 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 266.69 248.11 336300000 10174000 153660000 3843800 0 0 8252700 3674300 15498000 4604500 20739000 16256000 22387000 6681800 8874400 61657000 36089 757 32357 301078;301079;301080;301081;301082;301083;301084;301085;301086;301087;301088;301089;301090;301091;301092;301093;301094;301095 238325;238326;238327;238328;238329;238330;238331;238332;238333;238334;238335;238336;238337;238338;238339;238340;238341 238328 910 17 MQQQLDEYQELLDIK Unmodified 1892.919 0.91897907 757 P02545 LMNA Prelamin-A/C;Lamin-A/C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.17 3.85 2 1 3 1 2 1 1 1 88.482 85.854 2 1.8325E-83 100149 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 186.02 164.26 230950000 17010000 190170000 0 0 0 0 0 0 0 3428300 2974900 0 0 0 17369000 36090 757 32357 301096;301097;301098;301099;301100;301101 238342;238343;238344;238345;238346;238347;238348 238345 7 MQRADSEQPSK Acetyl (Protein N-term) 1317.5983 0.59831364 5180 Q9Y3Z3 SAMHD1 Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 yes yes 1 0 1 By MS/MS 2 0 1 1 20.501 16.788 2 0.010875 22123 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 59.908 40.813 10595000 0 10595000 0 0 0 0 0 0 0 0 0 0 0 0 0 36091 5180 32358 301102 238349 238349 1 MQREEGFNTK Acetyl (Protein N-term);Oxidation (M) 1296.5768 0.57684991 3218 Q8IUH5 ZDHHC17 Palmitoyltransferase ZDHHC17 yes yes 1 1 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 49.584 49.806 2 0.0056051 57004 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 54.157 25.949 6602000 0 0 0 0 0 0 0 0 0 0 0 0 0 6602000 0 36092 3218 32359 301103;301104;301105 238350;238351;238352 238352 4837 3 MQSFGMK 2 Oxidation (M) 859.35681 0.35680972 304 O43175 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 0 2 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 9.1666 9.3422 2 0.017581 6880 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 57.811 44.604 42656000 0 0 0 3799800 0 4901700 0 0 2710800 3846300 7344100 6231100 5325900 3557700 4938800 36093 304 32360 301106;301107;301108;301109;301110;301111;301112;301113;301114 238353 238353 390;391 1 MQSTLISAAR Unmodified 1076.5648 0.56482866 1474 P43246 MSH2 DNA mismatch repair protein Msh2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 2 1 1 42.728 43.232 2 0.00055162 47349 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 128.36 107.7 65372000 0 0 0 0 0 0 0 0 0 0 0 0 0 27422000 37950000 36094 1474 32361 301115;301116;301117;301118;301119;301120;301121 238354;238355;238356;238357;238358;238359;238360 238359 7 MQSTLISAARDLGLDPGK Unmodified 1871.9775 0.977497 1474 P43246 MSH2 DNA mismatch repair protein Msh2 yes yes 0 0 1 By MS/MS 2 0 1 1 90.318 85.422 3 0.006422 106126 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 39.237 29.983 18749000 0 18749000 0 0 0 0 0 0 0 0 0 0 0 0 0 36095 1474 32362 301122 238361 238361 1 MQTADHPEVVPFLYNR Unmodified 1915.9251 0.9250675 4872 Q9UER7 DAXX Death domain-associated protein 6 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 77.88 78.008 3 0.032387 90068 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 27.149 18.972 44511000 0 0 0 0 0 7062400 0 0 0 5247600 3700700 0 3402900 4468500 20628000 36096 4872 32363 301123;301124;301125;301126;301127;301128 238362 238362 1 MQTADHPEVVPFLYNR Oxidation (M) 1931.92 0.91998213 4872 Q9UER7 DAXX Death domain-associated protein 6 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 76.076 76.218 3 0.00037874 87944 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 51.466 47.742 38920000 0 0 0 0 0 0 10896000 0 11481000 16543000 0 0 0 0 0 36097 4872 32363 301129;301130;301131 238363;238364;238365;238366 238363 6221 4 MQTEAQHERELQK Unmodified 1626.7784 0.77840327 4369 Q9H2K8 TAOK3 Serine/threonine-protein kinase TAO3 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 15.75 12.493 3 0.002021 18402 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.864 51.451 9095200 5343700 0 3751500 0 0 0 0 0 0 0 0 0 0 0 0 36098 4369 32364 301132;301133 238367 238367 1 MQTEEVCDASAIVAK Unmodified 1650.7593 0.75930731 2830 Q5VZ89 DENND4C DENN domain-containing protein 4C yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 58.534 58.187 2 1.0679E-10 72800 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.14 128.92 148490000 0 23115000 0 8692700 7711700 7588800 7881100 10473000 6966200 12762000 12120000 12613000 13205000 9269200 16090000 36099 2830 32365 301134;301135;301136;301137;301138;301139;301140;301141;301142;301143;301144;301145;301146 238368;238369;238370;238371 238368 4 MQTPVNIPVPVLR Acetyl (Protein N-term);Oxidation (M) 1520.8385 0.83848433 4444 Q9H840 GEMIN7 Gem-associated protein 7 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 91.732 91.771 2 0.00023531 106467 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 61.65 53.118 31135000 0 0 0 1720300 2527300 4661600 0 2956900 0 4961000 4317300 4745600 0 0 5244900 36100 4444 32366 301147;301148;301149;301150;301151;301152;301153;301154 238372;238373;238374;238375;238376;238377;238378;238379;238380 238372 5887 9 MQTPVNIPVPVLR Acetyl (Protein N-term) 1504.8436 0.8435697 4444 Q9H840 GEMIN7 Gem-associated protein 7 yes yes 1 0 0 By MS/MS 10 0 1 1 96.353 96.508 2 0.00065423 112013 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.563 55.868 2054700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2054700 36101 4444 32366 301155 238381 238381 1 MQTQQVNTLK Unmodified 1189.6125 0.61250714 455 O75116 ROCK2 Rho-associated protein kinase 2 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 27.263 26.626 2 0.0015719 28713 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 105.1 83.015 211510000 14211000 132360000 0 0 2569900 7664100 4443100 0 2850100 7364500 10153000 9282700 4559900 5581200 10469000 36102 455 32367 301156;301157;301158;301159;301160;301161;301162;301163;301164;301165;301166;301167 238382;238383;238384;238385;238386;238387 238383 5 MQTQQVNTLK Oxidation (M) 1205.6074 0.60742176 455 O75116 ROCK2 Rho-associated protein kinase 2 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 21.146 16.879 2 1.0193E-05 22305 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.25 111.18 22126000 4816800 17309000 0 0 0 0 0 0 0 0 0 0 0 0 0 36103 455 32367 301168;301169 238388;238389 238388 582 2 MQVDEAASREDK Unmodified 1377.6194 0.61944301 4203 Q9BW71 HIRIP3 HIRA-interacting protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 17.871 17.191 3 0.0024058 16038 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.338 79.143 150460000 4776500 53449000 0 4882100 4976500 5549000 4422700 6933400 2921500 7500400 10871000 11259000 10653000 7912000 14356000 36104 4203 32368 301170;301171;301172;301173;301174;301175;301176;301177;301178;301179;301180;301181;301182;301183;301184 238390;238391;238392;238393;238394;238395;238396;238397;238398;238399;238400;238401;238402;238403 238395 12 MQVDEAASREDK Oxidation (M) 1393.6144 0.61435763 4203 Q9BW71 HIRIP3 HIRA-interacting protein 3 yes yes 0 1 1 By MS/MS 3 0 1 1 10.279 6.9066 3 0.032856 9190 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 53.448 44.648 6665700 0 6665700 0 0 0 0 0 0 0 0 0 0 0 0 0 36105 4203 32368 301185 238404 238404 0 MQVDQEEGHQK Oxidation (M) 1343.5776 0.57757819 686 O95757 HSPA4L Heat shock 70 kDa protein 4L yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS 3.67 2.87 3 2 1 1 3 1 1 6.2144 3.667 2;3 1.7257E-07 4548 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 166.19 161.89 346350000 7762300 327880000 4468300 0 0 0 0 0 0 0 0 0 0 0 6241900 36106 686 32369 301186;301187;301188;301189;301190;301191 238405;238406;238407;238408;238409 238409 830 4 MQVDQEEGHQK Unmodified 1327.5827 0.58266357 686 O95757 HSPA4L Heat shock 70 kDa protein 4L yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 10.308 9.5296 3 1.0975E-09 11718 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.94 108.22 425870000 21033000 344160000 3109000 1839600 1916000 4024700 2848800 2904800 1788900 3383800 0 10215000 3911100 6568500 18164000 36107 686 32369 301192;301193;301194;301195;301196;301197;301198;301199;301200;301201;301202;301203;301204;301205;301206 238410;238411;238412;238413;238414 238410 3 MQVDQEEPHVEEQQQQTPAENK Unmodified 2621.1664 0.166373 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 4 2 12 1 4 1 1 1 1 1 1 1 1 1 1 1 1 1 39.792 38.242 3 1.8986E-171 42246 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 198.14 191.64 2189800000 63948000 1646200000 3713500 5480200 5599100 14180000 8803400 7739400 6088100 15736000 70857000 54641000 11989000 47020000 227860000 36108 1337 32370 301207;301208;301209;301210;301211;301212;301213;301214;301215;301216;301217;301218;301219;301220;301221;301222;301223;301224 238415;238416;238417;238418;238419;238420;238421;238422;238423;238424;238425;238426;238427;238428;238429;238430;238431;238432;238433;238434;238435;238436 238421 22 MQVDQEEPHVEEQQQQTPAENK Oxidation (M) 2637.1613 0.16128762 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 6.9 3.81 3 1 6 1 3 1 1 1 1 1 1 32.627 31.129 3 3.3436E-112 33697 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 173.43 170.67 536660000 48552000 393310000 0 3892100 0 0 0 0 0 0 20847000 20750000 6683800 12565000 30056000 36109 1337 32370 301225;301226;301227;301228;301229;301230;301231;301232;301233;301234 238437;238438;238439;238440;238441;238442;238443;238444;238445;238446;238447;238448;238449 238441 2017 13 MQVGGDGVK Oxidation (M) 905.42767 0.42766648 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 7.8793 8.0301 2 0.011929 6531 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.112 8.6859 45347000 0 0 0 0 1787300 1892600 3287500 2976600 3341500 3074200 14965000 5638000 0 4417400 3966500 36110 2172 32371 301235;301236;301237;301238;301239;301240;301241;301242;301243;301244 238450 238450 3537 1 MQVGGDGVK Unmodified 889.43275 0.43275186 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 19.484 19.552 2 0.030712 19576 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 80.438 9.5256 31774000 0 0 0 9188200 7905500 0 0 0 0 0 0 14680000 0 0 0 36111 2172 32371 301245;301246;301247 238451 238451 0 MQVSETCTGPMLQAK Oxidation (M) 1695.763 0.76301248 3566 Q8WVV4 POF1B Protein POF1B yes yes 0 1 0 By MS/MS 10 0 3 3 47.352 46.763 2 1.2657E-14 54362 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 101.93 82.686 23403000 0 0 0 23403000 0 0 0 0 0 0 0 0 0 0 0 36112 3566 32372 301248;301249;301250 238452;238453;238454 238454 5055;5056 3 MQVSETCTGPMLQAK 2 Oxidation (M) 1711.7579 0.7579271 3566 Q8WVV4 POF1B Protein POF1B yes yes 0 2 0 By MS/MS 10 0 1 1 36.484 36.031 2 0.0037126 40098 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 47.302 45.361 6058000 0 0 0 6058000 0 0 0 0 0 0 0 0 0 0 0 36113 3566 32372 301251 238455 238455 5055;5056 0 MQVSETCTGPMLQAK Unmodified 1679.7681 0.76809785 3566 Q8WVV4 POF1B Protein POF1B yes yes 0 0 0 By MS/MS 10 0 1 1 56.975 56.306 2 9.0473E-05 64860 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 102.4 102.4 16041000 0 0 0 16041000 0 0 0 0 0 0 0 0 0 0 0 36114 3566 32372 301252 238456 238456 0 MQVYSGSK Unmodified 898.42185 0.42185282 2397 Q14241 TCEB3 Transcription elongation factor B polypeptide 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 17.756 17.947 2 0.006809 18460 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 95.909 63.974 56549000 0 0 0 3170100 3211800 4186800 3225200 0 3416600 4990200 5733700 7256200 6529500 5755100 9073600 36115 2397 32373 301253;301254;301255;301256;301257;301258;301259;301260;301261;301262;301263 238457;238458;238459;238460;238461;238462;238463;238464;238465 238465 9 MQYAPNTQVEILPQGHESPIFK Oxidation (M) 2542.2526 0.25260923 1407 P40121 CAPG Macrophage-capping protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 78.589 78.686 3 3.2972E-72 90837 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 126.02 122.49 244630000 0 0 0 0 2813500 31442000 8206300 10897000 0 30243000 23357000 25754000 13554000 16866000 81494000 36116 1407 32374 301264;301265;301266;301267;301268;301269;301270;301271;301272;301273 238466;238467;238468;238469;238470;238471;238472;238473;238474;238475;238476;238477 238467 2199 12 MQYAPNTQVEILPQGHESPIFK Unmodified 2526.2577 0.25769461 1407 P40121 CAPG Macrophage-capping protein yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 80.495 80.659 3 0.00047988 92947 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.373 29.151 37573000 0 0 0 0 0 0 0 0 1313400 7116500 0 0 0 0 29143000 36117 1407 32374 301274;301275;301276 238478 238478 1 MQYFQPTIQEK Unmodified 1411.6806 0.6805867 3295 Q8IZH2 XRN1 5'-3' exoribonuclease 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 63.312 62.437 2 3.7261E-09 79092 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.25 117.53 60429000 0 26735000 0 2449100 2118800 2939800 3401500 4676800 2227400 4053900 4111400 0 4067900 3647700 0 36118 3295 32375 301277;301278;301279;301280;301281;301282;301283;301284;301285;301286;301287;301288;301289 238479;238480;238481;238482;238483;238484;238485;238486;238487;238488;238489;238490 238482 12 MQYFQPTIQEK Oxidation (M) 1427.6755 0.67550132 3295 Q8IZH2 XRN1 5'-3' exoribonuclease 1 yes yes 0 1 0 By MS/MS 2 0 1 1 58.543 52.712 2 0.00015034 67970 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 111.46 98.839 18161000 0 18161000 0 0 0 0 0 0 0 0 0 0 0 0 0 36119 3295 32375 301290 238491 238491 4892 1 MRAEDGENYDIK Unmodified 1439.6351 0.63509307 482 O75347 TBCA Tubulin-specific chaperone A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.56 3.9 6 1 9 2 3 2 1 1 1 1 1 1 1 1 1 30.204 28.331 3 3.4754E-13 35846 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 129.34 122.17 1177000000 189070000 660370000 63782000 1797100 0 0 3171500 1835300 1503800 5149300 49319000 38108000 0 41357000 121540000 36120 482 32376 301291;301292;301293;301294;301295;301296;301297;301298;301299;301300;301301;301302;301303;301304;301305;301306 238492;238493;238494;238495;238496;238497;238498;238499;238500;238501;238502;238503;238504;238505;238506 238504 15 MRAEDGENYDIK Oxidation (M) 1455.63 0.63000769 482 O75347 TBCA Tubulin-specific chaperone A yes yes 0 1 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 24.362 20.665 3 0.012058 26340 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 51.211 44.775 339440000 0 308320000 31121000 0 0 0 0 0 0 0 0 0 0 0 0 36121 482 32376 301307;301308;301309 238507;238508 238507 606 2 MRAEDGENYDIKK Oxidation (M) 1583.725 0.72497071 482 O75347 TBCA Tubulin-specific chaperone A yes yes 0 1 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 15.414 15.16 3 0.0044334 14030 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 59.294 53.579 104240000 0 0 70276000 0 0 0 2282100 0 0 0 14918000 8995000 0 7768300 0 36122 482 32377 301310;301311;301312;301313;301314 238509;238510;238511;238512;238513 238509 606 5 MRAEDGENYDIKK Unmodified 1567.7301 0.73005609 482 O75347 TBCA Tubulin-specific chaperone A yes yes 0 0 2 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 26.458 22.255 3 1.1377E-12 28047 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 122.46 114.14 141190000 47487000 23570000 70138000 0 0 0 0 0 0 0 0 0 0 0 0 36123 482 32377 301315;301316;301317 238514 238514 1 MRAESTANAGQSDNR Unmodified 1606.7118 0.71178026 472 O75179 ANKRD17 Ankyrin repeat domain-containing protein 17 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.9575 7.0811 3 1.9227E-20 5272 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 91.657 87.593 166240000 0 0 0 6679900 5264400 6498500 10471000 11520000 8726700 16838000 28072000 9124200 15286000 21756000 26004000 36124 472 32378 301318;301319;301320;301321;301322;301323;301324;301325;301326;301327;301328;301329 238515;238516;238517;238518;238519;238520;238521;238522;238523;238524;238525;238526 238520 12 MRAESTANAGQSDNR Oxidation (M) 1622.7067 0.70669489 472 O75179 ANKRD17 Ankyrin repeat domain-containing protein 17 yes yes 0 1 1 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 5.6638 5.7812 3 5.5617E-24 3700 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 123.76 111.38 114680000 0 0 0 8757300 6968700 6867600 8779900 9203200 10083000 9503700 8900900 9100200 13193000 10554000 12768000 36125 472 32378 301330;301331;301332;301333;301334;301335;301336;301337;301338;301339;301340;301341 238527;238528;238529;238530;238531;238532;238533;238534;238535 238534 596 9 MRAGGMSDSSK Unmodified 1125.4907 0.49067744 3615 Q92538 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 0 0 1 By MS/MS 2 0 1 1 8.4179 4.7792 2 5.3517E-08 8411 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 143.4 109.6 55065000 55065000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36126 3615 32379 301342 238536 238536 0 MRDAGDPSPPNK Unmodified 1283.5928 0.59283433 4138 Q9BTA9 WAC WW domain-containing adapter protein with coiled-coil yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 12.135 12.253 3 0.048021 10976 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 39.702 35.72 46774000 0 0 0 2539100 2962900 4628400 3722300 4029800 3903500 4805500 0 5622100 4299200 3645000 6615900 36127 4138 32380 301343;301344;301345;301346;301347;301348;301349;301350;301351;301352;301353 238537 238537 0 MRDILNMEK Unmodified 1148.5682 0.56819948 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 48.259 48.655 3 0.04098 53630 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.731 25.002 25933000 0 0 0 0 0 9207600 0 0 0 0 0 0 0 0 16725000 36128 1300 32381 301354;301355 238538 238538 1 MRDILNMEK Oxidation (M) 1164.5631 0.5631141 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 1 1 By MS/MS 2 0 1 1 46.127 39.135 3 0.031186 53629 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.49 25.186 21976000 21976000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36129 1300 32381 301356 238539;238540 238539 2 MREAEDMVQK Oxidation (M) 1251.5588 0.55875701 5278 Q9Y6D9 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 20 2 2 2 2 1 1 2 1 1 2 2 2 12.103 12.234 3 0.0057598 8190 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 49.35 31.915 83519000 0 0 0 7345700 5258100 6039900 8420200 6953700 1564600 7045100 6956800 6197000 8306700 7691300 11740000 36130 5278 32382 301357;301358;301359;301360;301361;301362;301363;301364;301365;301366;301367;301368;301369;301370;301371;301372;301373;301374;301375;301376 238541;238542;238543 238542 6681;6687 3 MREAEDMVQK Unmodified 1235.5638 0.56384238 5278 Q9Y6D9 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 20.89 21.136 3 0.015475 20668 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.764 35.178 102760000 0 0 0 0 2794000 6343500 8927800 0 5171600 9405900 14996000 12096000 12037000 8188800 22802000 36131 5278 32382 301377;301378;301379;301380;301381;301382;301383;301384;301385;301386 238544 238544 1 MREAETEPHEGK Unmodified 1412.6354 0.63542742 1434 P41223 BUD31 Protein BUD31 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.57 3.96 3 4 1 1 1 1 1 1 1 7.571 6.3054 3 0.0002883 5066 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 63.662 55.252 102030000 17983000 9900900 40247000 0 4243300 0 6758400 0 5765800 0 17129000 0 0 0 0 36132 1434 32383 301387;301388;301389;301390;301391;301392;301393 238545;238546;238547;238548 238547 4 MREAETEPHEGK Oxidation (M) 1428.6303 0.63034205 1434 P41223 BUD31 Protein BUD31 homolog yes yes 0 1 1 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 5.7186 5.5672 3 0.00014324 5436 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 94.122 85.167 187800000 0 0 142860000 0 5101500 5032200 6321300 3857800 0 0 6870600 8355500 5008800 4393200 0 36133 1434 32383 301394;301395;301396;301397;301398;301399;301400;301401;301402 238549;238550;238551;238552;238553;238554;238555;238556 238551 2249 6 MREAGAGPEEMLK Unmodified 1417.6694 0.66937009 165 O00512 BCL9 B-cell CLL/lymphoma 9 protein yes yes 0 0 1 By MS/MS 10 0 1 1 40.096 40.839 3 0.014739 44578 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.248 27.736 5448400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5448400 36134 165 32384 301403 238557 238557 1 MREANFTVSSMHGDMPQK Unmodified 2064.9179 0.91794999 1400 P38919 EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes yes 0 0 1 By MS/MS By matching By MS/MS 7.33 3.77 1 2 1 1 1 53.661 51.201 4 0.0005263 55559 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.983 35.583 121760000 72350000 0 0 0 0 0 0 5835500 0 0 0 0 0 0 43579000 36135 1400 32385 301404;301405;301406 238558;238559 238558 2 MREANFTVSSMHGDMPQK 3 Oxidation (M) 2112.9027 0.90269386 1400 P38919 EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes yes 0 3 1 By MS/MS 2 0 2 2 31.841 25.997 3;4 0.0011119 36958 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.58 37.487 38953000 38953000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36136 1400 32385 301407;301408 238560;238561 238560 2180;2181;2182 1 MREANFTVSSMHGDMPQK 2 Oxidation (M) 2096.9078 0.90777923 1400 P38919 EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes yes 0 2 1 By MS/MS By MS/MS By MS/MS By matching 4.29 3.61 5 2 4 1 1 1 39.295 35.096 3;4 2.0286E-26 48280 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 125.73 119.77 218000000 203620000 0 1667600 0 0 0 0 0 0 0 0 9323500 3395300 0 0 36137 1400 32385 301409;301410;301411;301412;301413;301414;301415 238562;238563;238564;238565;238566;238567 238563 2180;2181;2182 5 MREANFTVSSMHGDMPQK Oxidation (M) 2080.9129 0.91286461 1400 P38919 EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes yes 0 1 1 By MS/MS 2 0 4 4 51.022 43.138 3;4 9.9769E-16 56628 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 108.49 94.33 180650000 180650000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36138 1400 32385 301416;301417;301418;301419 238568;238569;238570;238571 238570 2180;2181;2182 2 MREDYDSVEQDGDEPGPQR Oxidation (M) 2237.9131 0.91311843 5248 Q9Y5S9 RBM8A RNA-binding protein 8A yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.367 33.552 3 3.6619E-31 36306 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 104.89 101.4 187400000 0 0 0 6402500 6987700 10130000 6182900 4980000 5959500 11827000 28764000 33441000 21631000 11898000 39200000 36139 5248 32386 301420;301421;301422;301423;301424;301425;301426;301427;301428;301429;301430;301431 238572;238573;238574;238575;238576;238577;238578;238579;238580;238581;238582;238583;238584;238585 238582 6651 14 MREDYDSVEQDGDEPGPQR Unmodified 2221.9182 0.9182038 5248 Q9Y5S9 RBM8A RNA-binding protein 8A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.611 37.791 3 2.9525E-42 40845 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 123.55 107.96 259000000 0 0 0 7530800 7174700 11395000 9787700 11829000 6920700 10051000 33250000 38504000 31119000 20062000 71373000 36140 5248 32386 301432;301433;301434;301435;301436;301437;301438;301439;301440;301441;301442;301443 238586;238587;238588;238589;238590;238591;238592;238593;238594;238595;238596;238597;238598 238589 13 MREEVITLIR Oxidation (M) 1274.7017 0.70165649 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 1 2 2 2 1 2 3 2 1 59.502 59.581 2;3 0.0028437 68848 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 60.434 36.09 674810000 0 0 0 65412000 31727000 114980000 21599000 43291000 69390000 92135000 23071000 61601000 64966000 47760000 38880000 36141 1518 32387 301444;301445;301446;301447;301448;301449;301450;301451;301452;301453;301454;301455;301456;301457;301458;301459;301460;301461;301462;301463;301464;301465 238599;238600;238601;238602;238603;238604;238605;238606;238607;238608;238609 238608 2406 8 MREEVITLIR Unmodified 1258.7067 0.70674187 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.797 66.88 3 0.011928 76625 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 40.496 18.504 190360000 0 0 0 6411300 5334900 31523000 8794200 10609000 16288000 16540000 13328000 19243000 11628000 11951000 38715000 36142 1518 32387 301466;301467;301468;301469;301470;301471;301472;301473;301474;301475;301476;301477 238610;238611;238612;238613;238614;238615;238616;238617;238618 238610 9 MREIVHIQAGQCGNQIGTK Oxidation (M) 2155.0626 0.062640392 4160 Q9BUF5 TUBB6 Tubulin beta-6 chain yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.53 1.88 1 16 1 1 1 2 2 2 1 1 2 1 2 1 41.995 41.764 3;4 2.7218E-38 45690 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 113.54 105.92 447260000 11041000 0 0 0 4424500 24577000 35818000 49541000 53577000 24881000 28741000 83739000 41115000 57572000 32235000 36143 4160 32388 301478;301479;301480;301481;301482;301483;301484;301485;301486;301487;301488;301489;301490;301491;301492;301493;301494 238619;238620;238621;238622;238623;238624;238625;238626;238627;238628;238629;238630;238631;238632;238633;238634 238631 5645 13 MREIVHIQAGQCGNQIGTK Unmodified 2139.0677 0.06772577 4160 Q9BUF5 TUBB6 Tubulin beta-6 chain yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 47.903 48.409 3;4 0.00015509 53915 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.334 51.734 41098000 0 0 0 0 0 0 0 0 0 0 0 5450400 5382600 13187000 17078000 36144 4160 32388 301495;301496;301497;301498 238635;238636 238636 2 MREIVHLQAGQCGNQIGAK Unmodified 2109.0572 0.057161084 1963 P68371 TUBB4B Tubulin beta-4B chain no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.78 1.31 2 70 2 8 5 7 8 6 6 5 7 4 6 4 4 51.008 50.883 2;3;4 4.8626E-110 53783 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 190.55 0 4753000000 34831000 0 0 94129000 72194000 323220000 176040000 316500000 268680000 264770000 282660000 452440000 416100000 440800000 1610600000 36145 1963 32389 301499;301500;301501;301502;301503;301504;301505;301506;301507;301508;301509;301510;301511;301512;301513;301514;301515;301516;301517;301518;301519;301520;301521;301522;301523;301524;301525;301526;301527;301528;301529;301530;301531;301532;301533;301534;301535;301536;301537;301538;301539;301540;301541;301542;301543;301544;301545;301546;301547;301548;301549;301550;301551;301552;301553;301554;301555;301556;301557;301558;301559;301560;301561;301562;301563;301564;301565;301566;301567;301568;301569;301570 238637;238638;238639;238640;238641;238642;238643;238644;238645;238646;238647;238648;238649;238650;238651;238652;238653;238654;238655;238656;238657;238658;238659;238660;238661;238662;238663;238664;238665;238666;238667;238668;238669;238670;238671;238672;238673;238674;238675;238676;238677;238678;238679;238680;238681;238682;238683;238684;238685;238686;238687;238688;238689;238690;238691;238692;238693;238694;238695;238696;238697;238698;238699;238700;238701;238702;238703;238704;238705;238706;238707;238708;238709;238710;238711;238712;238713;238714;238715;238716;238717;238718;238719;238720;238721;238722 238663 70 MRENMARGPCNAPR Acetyl (Protein N-term);Oxidation (M) 1716.7607 0.76066149 1050 P17213 BPI Bactericidal permeability-increasing protein yes yes 1 1 2 By MS/MS By MS/MS 10 0 2 1 1 24.232 24.315 3 0.0033554 26114 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 45.257 32.874 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36146 1050 32390 301571;301572 238723;238724 238724 1468 2 MRGNDTFGPR Unmodified 1149.5349 0.53492552 5011 Q9ULX6 AKAP8L A-kinase anchor protein 8-like yes yes 0 0 1 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 20.036 20.319 3 0.0077986 20862 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 43.77 32.176 48738000 0 0 0 0 0 3336700 3119600 2119400 5479400 4804200 6108200 7558000 5492800 4778200 5941400 36147 5011 32391 301573;301574;301575;301576;301577;301578;301579;301580;301581;301582 238725;238726;238727;238728 238728 3 MRGQAFVIFK Oxidation (M) 1211.6485 0.64849871 877;866 P08579;P09012 SNRPB2;SNRPA U2 small nuclear ribonucleoprotein B'';U1 small nuclear ribonucleoprotein A no no 0 1 1 By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 2 1 61.177 61.311 3 0.0036926 68591 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.461 45.774 64281000 0 0 0 3663600 0 7405100 5213200 5548200 0 5135100 0 4148200 0 12479000 20688000 36148 866;877 32392 301583;301584;301585;301586;301587;301588;301589;301590;301591 238729;238730 238729 1111 2 MRINNVPAEGENEVNNELANR Oxidation (M) 2398.1295 0.12953398 4654 Q9NUQ9 FAM49B Protein FAM49B yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 2 1 1 1 1 55.409 55.812 3 1.5217E-07 63155 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 56.529 43.074 29492000 0 0 0 0 0 0 0 0 0 7328400 5602600 7784300 2523000 0 6253400 36149 4654 32393 301592;301593;301594;301595;301596;301597 238731;238732;238733;238734;238735;238736 238732 6063 6 MRINNVPAEGENEVNNELANR Unmodified 2382.1346 0.13461936 4654 Q9NUQ9 FAM49B Protein FAM49B yes yes 0 0 1 By MS/MS 10 0 1 1 62.516 63.089 3 0.038308 71392 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 25.987 17.898 5862900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5862900 36150 4654 32393 301598 238737 238737 0 MRIPNYQLSPTK Unmodified 1446.7653 0.76531938 448 O60934 NBN Nibrin yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 59.132 59.53 3 0.016162 67013 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.674 25.488 15806000 0 0 0 0 0 0 0 0 0 0 0 0 5358200 0 10448000 36151 448 32394 301599;301600 238738 238738 1 MRNGYELSPTAAANFTR Oxidation (M) 1913.9054 0.90539469 1589 P49721 PSMB2 Proteasome subunit beta type-2 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 62.428 62.625 3 0.00021941 70783 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 56.215 42.559 31149000 0 0 0 0 0 3095600 0 0 0 7749300 0 9283500 0 11021000 0 36152 1589 32395 301601;301602;301603;301604 238739;238740;238741 238740 2554 3 MRNGYELSPTAAANFTR Unmodified 1897.9105 0.91048007 1589 P49721 PSMB2 Proteasome subunit beta type-2 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 64.96 65.315 3 0.0016775 73994 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.212 26.853 26556000 0 0 0 0 0 0 0 2905000 0 0 4210500 0 0 0 19441000 36153 1589 32395 301605;301606;301607;301608 238742;238743;238744 238742 3 MRPFEGFQR Unmodified 1166.5655 0.56549736 4162 Q9BUJ2 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 48.921 49.278 3 0.0066799 55946 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 60.892 47.438 92965000 0 0 0 0 0 15209000 9430300 0 0 6704900 6672300 21040000 12377000 0 21532000 36154 4162 32396 301609;301610;301611;301612;301613;301614;301615 238745;238746;238747 238747 3 MRPFEGFQR Oxidation (M) 1182.5604 0.56041199 4162 Q9BUJ2 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 38.482 38.767 3 0.017092 42152 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 42.19 34.127 156610000 0 0 0 13761000 0 19308000 0 0 0 18251000 17758000 29368000 20293000 14549000 23327000 36155 4162 32396 301616;301617;301618;301619;301620;301621;301622;301623 238748;238749 238749 5651 1 MRPFEGFQRK Unmodified 1294.6605 0.66046038 4162 Q9BUJ2 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes yes 0 0 2 By matching By MS/MS By MS/MS 10 0 3 1 1 1 37.478 38.026 3 0.047713 41172 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.894 33.808 22854000 0 0 0 0 0 0 0 2096400 0 0 0 9293400 0 0 11464000 36156 4162 32397 301624;301625;301626 238750 238750 0 MRPFEGFQRK Oxidation (M) 1310.6554 0.655375 4162 Q9BUJ2 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes yes 0 1 2 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 29.005 29.1 3 0.017299 31465 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 58.743 49.088 82203000 0 0 0 0 1593600 14025000 11757000 0 21016000 0 10272000 0 23541000 0 0 36157 4162 32397 301627;301628;301629;301630;301631;301632 238751 238751 5651 1 MRPGEATLSC Unmodified 1120.5005 0.50051385 1791 P57081 WDR4 tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 33.776 29.634 2 0.018009 38370 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.139 93.1 209430000 0 195710000 13720000 0 0 0 0 0 0 0 0 0 0 0 0 36158 1791 32398 301633;301634;301635 238752;238753;238754 238752 1 MRPGEATLSC Oxidation (M) 1136.4954 0.49542847 1791 P57081 WDR4 tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4 yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 24.396 20.837 2 0.013206 27622 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.64 90.77 54200000 0 49683000 4517400 0 0 0 0 0 0 0 0 0 0 0 0 36159 1791 32398 301636;301637 238755 238755 2911 0 MRPGVACSVSQAQK Unmodified 1517.7443 0.74426637 1326 P32969 RPL9 60S ribosomal protein L9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 24.82 25.083 3 1.6931E-05 25372 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.944 73.808 101850000 0 0 0 0 6533000 0 7066800 7467900 5580000 7840500 12573000 10042000 9205000 13002000 22538000 36160 1326 32399 301638;301639;301640;301641;301642;301643;301644;301645;301646;301647;301648 238756;238757;238758;238759;238760;238761;238762;238763;238764;238765;238766;238767 238758 11 MRPGVACSVSQAQK Oxidation (M) 1533.7392 0.73918099 1326 P32969 RPL9 60S ribosomal protein L9 yes yes 0 1 1 By MS/MS By MS/MS 10 0 2 1 1 19.064 19.365 3 0.00082706 18428 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 50.843 39.369 7838700 0 0 0 0 0 0 0 0 0 0 0 0 0 7838700 0 36161 1326 32399 301649;301650 238768;238769 238769 1974 2 MRQGEEVFQSLSK Oxidation (M) 1553.7508 0.75079153 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 49.167 47.431 3 0.0025664 52810 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 45.614 25.874 291540000 145100000 0 17358000 16474000 0 40457000 0 19053000 24407000 28692000 0 0 0 0 0 36162 3641 32400 301651;301652;301653;301654;301655;301656;301657 238770;238771;238772;238773;238774 238770 5154 2 MRQGEEVFQSLSK Unmodified 1537.7559 0.75587691 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 2 1 1 1 1 1 1 1 1 54.906 52.951 2;3 5.6598E-09 74548 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 152.31 119.58 280730000 213890000 0 0 0 5250300 0 11671000 0 0 16913000 0 9961000 8969200 14075000 0 36163 3641 32400 301658;301659;301660;301661;301662;301663;301664;301665;301666;301667 238775;238776;238777;238778;238779;238780;238781;238782;238783 238780 8 MRYLEVSEPQDIECCGALEYYDK Oxidation (M) 2883.2401 0.24013157 278 O15371 EIF3D Eukaryotic translation initiation factor 3 subunit D yes yes 0 1 1 By MS/MS 2 0 1 1 82.607 74.476 3 5.0831E-11 97477 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.693 67.271 16141000 16141000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36164 278 32401 301668 238784;238785 238784 368 2 MRYLEVSEPQDIECCGALEYYDK Unmodified 2867.2452 0.24521695 278 O15371 EIF3D Eukaryotic translation initiation factor 3 subunit D yes yes 0 0 1 By MS/MS 2 0 1 1 85.264 77.134 3 4.7333E-38 100639 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 118.05 110.86 27441000 27441000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36165 278 32401 301669 238786 238786 1 MSAAEAVK Oxidation (M) 821.3953 0.39530372 1029 P15924 DSP Desmoplakin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 7.4535 7.5063 2 0.01132 5225 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 66.073 17.899 275090000 0 0 0 36603000 1629300 0 62932000 0 0 3267400 170650000 0 0 0 0 36166 1029 32402 301670;301671;301672;301673;301674 238787;238788 238787 1437 2 MSAAVTAGK Oxidation (M) 850.42185 0.42185282 1710 P53350 PLK1 Serine/threonine-protein kinase PLK1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 5.8685 6.0074 2 0.008421 3741 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 60.788 17.788 64273000 0 0 0 3809300 0 7374000 7364100 4061800 6406000 5799500 6736900 5072400 6625300 5498600 5524600 36167 1710 32403 301675;301676;301677;301678;301679;301680;301681;301682;301683;301684;301685 238789;238790;238791;238792;238793;238794;238795;238796;238797 238790 2766 9 MSAAVTAGK Unmodified 834.42694 0.4269382 1710 P53350 PLK1 Serine/threonine-protein kinase PLK1 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 11.749 11.944 2 0.013982 10311 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 58.981 20.189 21289000 0 0 0 0 0 9261500 0 6002500 0 0 6025100 0 0 0 0 36168 1710 32403 301686;301687;301688 238798 238798 1 MSAEDIEK Unmodified 921.41135 0.41134771 4990 Q9ULC4 MCTS1 Malignant T-cell-amplified sequence 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 25.846 26.082 2 0.0093409 27809 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 83.206 47.911 106700000 0 0 0 7522200 0 9726500 6342100 6013600 5141500 9667600 15038000 18618000 0 0 28631000 36169 4990 32404 301689;301690;301691;301692;301693;301694;301695;301696;301697 238799;238800;238801;238802 238799 4 MSAEDIEK Oxidation (M) 937.40626 0.40626233 4990 Q9ULC4 MCTS1 Malignant T-cell-amplified sequence 1 yes yes 0 1 0 By matching By MS/MS By matching By matching By matching By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 12.514 11.402 2 0.01536 10124 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.436 34.327 39186000 5080000 24712000 0 0 0 1765100 1204000 0 0 0 0 2517600 0 0 3907500 36170 4990 32404 301698;301699;301700;301701;301702;301703 238803;238804 238804 6335 2 MSAEINEIIR Oxidation (M) 1190.5965 0.59652272 1073 P18206 VCL Vinculin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 57.677 57.967 2 0.0082676 66093 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 52.278 34.721 40226000 0 0 0 0 0 0 6788400 0 0 10873000 0 0 0 0 22565000 36171 1073 32405 301704;301705;301706;301707;301708 238805;238806;238807;238808;238809 238806 1537 4 MSAEINEIIR Unmodified 1174.6016 0.6016081 1073 P18206 VCL Vinculin yes yes 0 0 0 By MS/MS 2 0 1 1 75.43 70.49 2 0.031848 88207 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.246 26.312 81959000 0 81959000 0 0 0 0 0 0 0 0 0 0 0 0 0 36172 1073 32405 301709 238810 238810 1 MSASDPNSSIFLTDTAK Oxidation (M) 1799.8247 0.82474434 1155 P23381 WARS Tryptophan--tRNA ligase, cytoplasmic;T1-TrpRS;T2-TrpRS yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 66.106 64.925 2 7.35E-131 80941 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 224.05 211.49 775750000 12127000 612430000 0 7535400 5710900 10109000 10185000 7212800 5699300 11530000 19600000 19916000 9771000 16590000 27335000 36173 1155 32406 301710;301711;301712;301713;301714;301715;301716;301717;301718;301719;301720;301721;301722;301723;301724;301725 238811;238812;238813;238814;238815;238816;238817;238818;238819;238820;238821;238822;238823;238824;238825;238826;238827 238814 1669 17 MSASDPNSSIFLTDTAK Unmodified 1783.8298 0.82982971 1155 P23381 WARS Tryptophan--tRNA ligase, cytoplasmic;T1-TrpRS;T2-TrpRS yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 4 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 72.059 70.796 2;3 6.1646E-72 87994 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 215.61 205.28 3172500000 31982000 2900800000 3595600 7384200 7124300 19461000 11511000 9006800 8075100 16877000 26423000 26077000 12562000 23204000 68428000 36174 1155 32406 301726;301727;301728;301729;301730;301731;301732;301733;301734;301735;301736;301737;301738;301739;301740;301741 238828;238829;238830;238831;238832;238833;238834;238835;238836;238837;238838;238839;238840;238841;238842;238843;238844 238831 16 MSASILLSK Unmodified 948.5314 0.53140327 4387 Q9H3U1 UNC45A Protein unc-45 homolog A yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 61.611 61.771 2 0.0353 69831 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 46.158 13.318 19462000 0 0 0 0 1098800 0 0 2698900 0 0 4216100 0 0 3374200 8074000 36175 4387 32407 301742;301743;301744;301745;301746 238845;238846 238846 2 MSATFIGNSTAIQELFK Oxidation (M) 1872.9291 0.92914983 1963;2350;4182 P68371;Q13885;Q9BVA1 TUBB4B;TUBB2A;TUBB2B Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.27 3.62 2 2 7 2 2 1 1 1 1 1 1 1 92.999 91.267 2 0 106512 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 279.12 35.59 886020000 325240000 341770000 0 6985600 0 0 14129000 43317000 25039000 0 68191000 44608000 16736000 0 0 36176 1963;2350;4182 32408 301747;301748;301749;301750;301751;301752;301753;301754;301755;301756;301757 238847;238848;238849;238850;238851;238852;238853;238854;238855;238856 238853 3159 7 MSATFIGNSTAIQELFK Unmodified 1856.9342 0.93423521 1963;2350;4182 P68371;Q13885;Q9BVA1 TUBB4B;TUBB2A;TUBB2B Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.71 3.81 2 1 4 2 1 1 1 1 1 95.429 93.11 2 1.9974E-130 115454 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 220.53 6.5309 354990000 237210000 103970000 0 1376200 0 0 0 1555100 0 0 0 0 0 990210 9888600 36177 1963;2350;4182 32408 301758;301759;301760;301761;301762;301763;301764 238857;238858;238859;238860 238857 3 MSCMDNK Unmodified 884.31904 0.31904401 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 7.8259 4.4469 2 0.019663 6460 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 154.35 143.53 355000000 18179000 336820000 0 0 0 0 0 0 0 0 0 0 0 0 0 36178 1124 32409 301765;301766 238861 238861 1 MSDAAGDIVDIREEIK Unmodified 1760.8615 0.86146419 582 O94763 URI1 Unconventional prefoldin RPB5 interactor 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 79.459 74.08 3 0.0081024 95293 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.794 34.698 30138000 23084000 0 7054400 0 0 0 0 0 0 0 0 0 0 0 0 36179 582 32410 301767;301768 238862;238863 238862 2 MSDAAGDIVDIREEIK Oxidation (M) 1776.8564 0.85637882 582 O94763 URI1 Unconventional prefoldin RPB5 interactor 1 yes yes 0 1 1 By MS/MS 2 0 1 1 75.236 72.388 3 0.021907 88332 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 41.695 31.773 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36180 582 32410 301769 238864 238864 1 MSDDIRK Acetyl (Protein N-term) 905.42767 0.42766648 2823 Q5VW36 FOCAD Focadhesin yes yes 1 0 1 By MS/MS By MS/MS By MS/MS 2.11 0.567 1 6 2 3 4 2 19.784 16.927 2 0.01461 21307 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.191 29.212 5439800000 2536100000 2827800000 75973000 0 0 0 0 0 0 0 0 0 0 0 0 36181 2823 32411 301770;301771;301772;301773;301774;301775;301776;301777;301778 238865;238866;238867;238868;238869;238870;238871 238866 5 MSDDIRK Acetyl (Protein N-term);Oxidation (M) 921.42258 0.4225811 2823 Q5VW36 FOCAD Focadhesin yes yes 1 1 1 By MS/MS By MS/MS By matching 2.4 0.49 3 2 2 2 1 14.035 10.581 2 0.022511 15398 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.12 9.199 255980000 157220000 84777000 13979000 0 0 0 0 0 0 0 0 0 0 0 0 36182 2823 32411 301779;301780;301781;301782;301783 238872;238873;238874;238875 238874 0 MSDDVHSLGK Unmodified 1087.4968 0.49680868 3912 Q96KQ7 EHMT2 Histone-lysine N-methyltransferase EHMT2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 22.432 22.577 2 0.043367 22444 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 39.001 19.215 25778000 0 0 0 0 1067500 1661200 1807200 1843500 1246100 2679200 6706700 0 3417100 5349100 0 36183 3912 32412 301784;301785;301786;301787;301788;301789;301790;301791;301792 238876 238876 1 MSDILAEGITIVEDINK Unmodified 1859.955 0.95503023 2587 Q15833 STXBP2 Syntaxin-binding protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 101.65 93.515 3 0.035212 120376 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 18.784 12.88 4853800 4853800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36184 2587 32413 301793 238877 238877 1 MSDLTPVHFTPLDSSVDR Oxidation (M) 2031.9572 0.95715549 5133 Q9Y314 NOSIP Nitric oxide synthase-interacting protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.96 77.021 3 2.6523E-15 88676 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 92.551 83.95 224950000 0 0 0 9319200 10922000 21041000 15740000 15752000 13302000 25108000 25159000 25829000 11626000 16079000 35073000 36185 5133 32414 301794;301795;301796;301797;301798;301799;301800;301801;301802;301803;301804;301805 238878;238879;238880;238881;238882;238883;238884;238885;238886;238887;238888;238889 238880 6523 12 MSDLTPVHFTPLDSSVDR Unmodified 2015.9622 0.96224087 5133 Q9Y314 NOSIP Nitric oxide synthase-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 79.61 79.749 3 1.6893E-11 91857 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.846 82.896 44682000 0 0 0 0 0 4634100 0 3638200 1875300 5510200 0 5690500 0 3739400 19594000 36186 5133 32414 301806;301807;301808;301809;301810;301811;301812 238890;238891;238892;238893 238891 4 MSEGINFSDNLGR Oxidation (M) 1454.646 0.64599211 37;3836 A8MPP1;Q92771;Q96FC9 DDX11L8;DDX12P;DDX11 Putative ATP-dependent RNA helicase DDX11-like protein 8;Putative ATP-dependent RNA helicase DDX12;Probable ATP-dependent RNA helicase DDX11 no no 0 1 0 By MS/MS 10 0 1 1 61.512 61.876 2 0.049065 70618 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 41.164 30.406 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36187 37;3836 32415 301813 238894 238894 1 MSEHYWTPQSNVSNETSTGK Unmodified 2281.991 0.99097482 5061 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 55.59 49.621 3 8.7462E-06 67153 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.374 61.826 66815000 35196000 19761000 11857000 0 0 0 0 0 0 0 0 0 0 0 0 36188 5061 32416 301814;301815;301816 238895;238896;238897;238898 238896 4 MSEHYWTPQSNVSNETSTGK Oxidation (M) 2297.9859 0.98588944 5061 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 0 1 0 By MS/MS 2 0 1 1 52.246 44.231 3 0.00031953 60879 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.461 45.649 12402000 12402000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36189 5061 32416 301817 238899 238899 6416 1 MSEITTSSSAPFTQPLSSNEIFR Oxidation (M) 2545.2006 0.20063324 4161 Q9BUI4 POLR3C DNA-directed RNA polymerase III subunit RPC3 yes yes 0 1 0 By MS/MS 10 0 1 1 85.057 85.159 3 1.1181E-05 98682 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 46.833 42.726 5070700 0 0 0 0 0 0 0 0 0 5070700 0 0 0 0 0 36190 4161 32417 301818 238900 238900 5647 1 MSELNTK Acetyl (Protein N-term);Oxidation (M) 879.40078 0.40078303 31 A6NKN8 PCP4L1 Purkinje cell protein 4-like protein 1 yes yes 1 1 0 By MS/MS By matching By MS/MS By matching 10 0 4 1 1 1 1 6.3624 6.5148 2 0.014354 3325 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 42.719 19.676 5871200 0 0 0 886780 0 0 0 1375400 0 0 0 0 0 2020900 1588100 36191 31 32418 301819;301820;301821;301822 238901 238901 29 1 MSELPSYGEMAAEK Unmodified 1541.6742 0.67418069 3418 Q8NDI1 EHBP1 EH domain-binding protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 69.194 63.325 2 0.036479 80765 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 50.484 39.732 14230000 0 14230000 0 0 0 0 0 0 0 0 0 0 0 0 0 36192 3418 32419 301823 238902 238902 1 MSELSSSRPK Unmodified 1120.5547 0.55465791 2411 Q14527 HLTF Helicase-like transcription factor yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 13.918 14.109 2 9.1747E-41 13485 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 186.16 98.836 379450000 0 0 0 19689000 0 29027000 25085000 26466000 17327000 52385000 49397000 52145000 0 42066000 65864000 36193 2411 32420 301824;301825;301826;301827;301828;301829;301830;301831;301832;301833 238903;238904;238905;238906;238907 238904 5 MSELSSSRPK Oxidation (M) 1136.5496 0.54957253 2411 Q14527 HLTF Helicase-like transcription factor yes yes 0 1 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 8.2427 8.3736 2 2.0819E-15 6714 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 168.26 91.201 317920000 0 0 0 14905000 19502000 14264000 17392000 15012000 20917000 22634000 72379000 34654000 36799000 28462000 21001000 36194 2411 32420 301834;301835;301836;301837;301838;301839;301840;301841;301842;301843;301844;301845 238908;238909;238910;238911;238912;238913;238914 238914 3961 1 MSEMELK Unmodified 866.38778 0.3877755 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 33.151 32.589 2 0.02978 42007 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.262 36.016 104940000 0 26212000 0 8279200 9617400 0 0 0 0 0 14092000 0 13368000 12561000 20810000 36195 5216 32421 301846;301847;301848;301849;301850;301851;301852 238915;238916 238915 2 MSEMELK 2 Oxidation (M) 898.3776 0.37760474 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 8.2046 8.3084 2 0.041568 6665 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 40.103 17.174 29353000 0 0 0 2297900 1898200 1337100 3383500 2149800 3251700 0 0 5103300 3926300 2725500 3279200 36196 5216 32421 301853;301854;301855;301856;301857;301858;301859;301860;301861;301862 238917;238918 238917 2 MSEQQDLER Oxidation (M) 1150.4925 0.49245158 2828 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.483 13.641 2 0.0012602 12931 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 140.5 124.3 66548000 0 0 0 3199500 3154100 7556500 4154700 2299500 3362200 6240700 6887400 8030900 5308700 5014600 11339000 36197 2828 32422 301863;301864;301865;301866;301867;301868;301869;301870;301871;301872;301873;301874 238919;238920;238921;238922;238923;238924;238925;238926;238927;238928;238929;238930 238920 4469 12 MSESQAALPSALK Unmodified 1331.6755 0.67550132 5048 Q9UPM8 AP4E1 AP-4 complex subunit epsilon-1 yes yes 0 0 0 By MS/MS 2 0 1 1 62.096 56.221 2 8.0738E-10 72164 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.29 83.526 25600000 0 25600000 0 0 0 0 0 0 0 0 0 0 0 0 0 36198 5048 32423 301875 238931;238932 238932 2 MSGDLLELALK Oxidation (M) 1204.6373 0.6373249 3400 Q8NBP7 PCSK9 Proprotein convertase subtilisin/kexin type 9 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 88.781 85.116 2 0.0019949 105966 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.377 65.591 14800000 0 12108000 2691800 0 0 0 0 0 0 0 0 0 0 0 0 36199 3400 32424 301876;301877 238933;238934 238933 4956 2 MSGDLLELALK Unmodified 1188.6424 0.64241028 3400 Q8NBP7 PCSK9 Proprotein convertase subtilisin/kexin type 9 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 92.532 88.848 2 0.009322 110645 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.688 64.544 12851000 0 11931000 919830 0 0 0 0 0 0 0 0 0 0 0 0 36200 3400 32424 301878;301879 238935 238935 1 MSGDNSSQLTK Unmodified 1166.5238 0.52375171 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 13.472 13.625 2 0.009529 12365 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.192 62.041 63254000 0 0 0 4490100 3885800 4204800 4942200 3722500 5422400 8174700 727580 9583700 0 6293800 11806000 36201 1286 32425 301880;301881;301882;301883;301884;301885;301886;301887;301888;301889;301890 238936;238937;238938;238939;238940 238937 3 MSGDNSSQLTK Oxidation (M) 1182.5187 0.51866633 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 8.2002 7.6743 2 0.0003939 8411 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.98 93.928 38115000 3437300 7454300 0 1391200 1709100 0 2931900 0 2367400 2237200 6833100 0 3627500 2792500 3333800 36202 1286 32425 301891;301892;301893;301894;301895;301896;301897;301898;301899;301900;301901 238941;238942;238943;238944;238945 238943 1896 5 MSGECAPNVSVSVSTSHTTISGGGSR Oxidation (M) 2580.1544 0.1544281 780 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 25 3 2 2 3 3 1 3 2 2 1 2 1 54.216 54.307 3 3.8855E-142 61291 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 183.25 180.03 + 417630000 0 0 0 21105000 15252000 31483000 12578000 47089000 14799000 109770000 35133000 42203000 26845000 22561000 38815000 36203 780 32426 301902;301903;301904;301905;301906;301907;301908;301909;301910;301911;301912;301913;301914;301915;301916;301917;301918;301919;301920;301921;301922;301923;301924;301925;301926 238946;238947;238948;238949;238950;238951;238952;238953;238954;238955;238956;238957;238958;238959;238960;238961;238962;238963;238964;238965;238966;238967;238968;238969;238970;238971;238972;238973;238974;238975;238976;238977;238978;238979;238980;238981;238982;238983;238984 238952 937 39 MSGECAPNVSVSVSTSHTTISGGGSR Unmodified 2564.1595 0.15951348 780 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 2 2 1 1 56.735 57.061 3 4.7866E-51 65136 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 105.03 100.96 + 63028000 0 0 0 0 0 6747200 0 3405300 0 17212000 9638500 8442600 0 0 17582000 36204 780 32426 301927;301928;301929;301930;301931;301932;301933;301934 238985;238986;238987;238988;238989;238990;238991;238992;238993 238987 9 MSGELSNR Unmodified 892.40727 0.40726539 4097 Q9BQI0 AIF1L Allograft inflammatory factor 1-like yes yes 0 0 0 By MS/MS 10 0 1 1 9.2988 9.4543 2 0.012884 7877 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 73.616 8.8399 6592600 0 0 0 0 0 0 0 6592600 0 0 0 0 0 0 0 36205 4097 32427 301935 238994 238994 1 MSGEPIQTVESIR Unmodified 1445.7184 0.71842877 2810 Q5VT52 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 66.623 66.719 2 0.0027457 76372 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.164 45.433 20657000 0 0 0 0 2295800 0 0 2576300 0 2871000 0 4879100 3294600 4740700 0 36206 2810 32428 301936;301937;301938;301939;301940;301941;301942 238995;238996;238997;238998 238998 3 MSGEPIQTVESIR Oxidation (M) 1461.7133 0.71334339 2810 Q5VT52 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 59.877 59.947 2 0.0019164 69172 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 56.359 39.334 18001000 0 0 0 3189900 0 0 0 4772500 0 0 0 0 5876700 0 4161500 36207 2810 32428 301943;301944;301945;301946;301947 238999;239000;239001 239000 4444 3 MSGEPIQTVESIRVPGK Oxidation (M) 1842.9509 0.9509479 2810 Q5VT52 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 69.162 69.229 3 1.0034E-61 79485 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 170.78 164.88 520510000 0 0 0 23246000 39019000 36058000 53929000 43163000 40881000 47492000 56659000 79598000 46331000 0 54135000 36208 2810 32429 301948;301949;301950;301951;301952;301953;301954;301955;301956;301957;301958 239002;239003;239004;239005;239006;239007;239008;239009;239010;239011;239012;239013;239014;239015 239008 4444 14 MSGEPIQTVESIRVPGK Unmodified 1826.956 0.95603328 2810 Q5VT52 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 73.659 73.718 3 5.9895E-07 84892 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 82.837 78.666 317580000 0 0 0 8120800 15735000 24440000 10545000 38715000 25423000 26352000 44848000 43182000 25861000 0 54358000 36209 2810 32429 301959;301960;301961;301962;301963;301964;301965;301966;301967;301968;301969 239016;239017;239018;239019;239020;239021;239022;239023;239024;239025;239026 239018 11 MSGGQSGYELSEAK Unmodified 1442.6348 0.63475872 2866 Q6AWC2 WWC2 Protein WWC2 yes yes 0 0 0 By MS/MS 2 0 1 1 38.333 33.365 2 0.00082146 43613 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.618 65.161 18425000 0 18425000 0 0 0 0 0 0 0 0 0 0 0 0 0 36210 2866 32430 301970 239027 239027 1 MSGGSTMSSGGGNTNNSNSK Unmodified 1873.7531 0.75305273 3142 Q86U70 LDB1 LIM domain-binding protein 1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 8.1282 8.3452 2 0.024347 6029 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 25.718 22.293 8495000 0 0 0 0 0 468050 0 0 0 1503100 2888200 0 0 1498600 2137100 36211 3142 32431 301971;301972;301973;301974;301975 239028 239028 1 MSGGWELELNGTEAK Oxidation (M) 1636.7403 0.74028642 2134 Q07021 C1QBP Complement component 1 Q subcomponent-binding protein, mitochondrial yes yes 0 1 0 By MS/MS 2 0 1 1 76.224 71.387 2 0.00052006 89118 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.156 83.028 90290000 0 90290000 0 0 0 0 0 0 0 0 0 0 0 0 0 36212 2134 32432 301976 239029 239029 3435 1 MSGGWELELNGTEAK Unmodified 1620.7454 0.7453718 2134 Q07021 C1QBP Complement component 1 Q subcomponent-binding protein, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 80.913 72.783 2 0.014236 95510 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.674 48.987 6979000 6979000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36213 2134 32432 301977 239030 239030 1 MSGLHISGGQSVLEPIK Oxidation (M) 1767.9189 0.91891949 2456 Q14966 ZNF638 Zinc finger protein 638 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 75.612 70.285 2;3 0.00010917 85910 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 69.485 58.851 38239000 4875800 22284000 11079000 0 0 0 0 0 0 0 0 0 0 0 0 36214 2456 32433 301978;301979;301980 239031;239032;239033;239034 239034 4040 4 MSGLHISGGQSVLEPIK Unmodified 1751.924 0.92400487 2456 Q14966 ZNF638 Zinc finger protein 638 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 79.226 73.816 3 1.8352E-35 95310 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 127.83 117.2 75269000 73136000 0 2133100 0 0 0 0 0 0 0 0 0 0 0 0 36215 2456 32433 301981;301982 239035;239036 239035 2 MSGLIVGSAFGPIK Unmodified 1375.7534 0.75335771 4973 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 yes yes 0 0 0 By MS/MS 2 0 1 1 91.266 83.136 2 0.00054301 107914 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 118.28 92.471 12307000 12307000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36216 4973 32434 301983 239037 239037 1 MSGLSMAEVLAR Unmodified 1263.6315 0.63152802 3713 Q969F9 HPS3 Hermansky-Pudlak syndrome 3 protein yes yes 0 0 0 By matching By MS/MS By matching 10 0 3 1 1 1 81.732 81.783 2 0.019978 94611 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 50.292 31.021 7892900 0 0 0 0 815040 0 0 2539500 0 0 0 0 0 0 4538300 36217 3713 32435 301984;301985;301986 239038 239038 1 MSGLSMAEVLAR 2 Oxidation (M) 1295.6214 0.62135726 3713 Q969F9 HPS3 Hermansky-Pudlak syndrome 3 protein yes yes 0 2 0 By MS/MS 10 0 1 1 53.57 53.042 2 0.027825 60555 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 43.77 21.711 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36218 3713 32435 301987 239039 239039 1 MSILGVR Unmodified 774.44219 0.44219433 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.112 58.23 2 0.023371 65471 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 88.734 28.331 213810000 0 0 0 8674300 9913200 16360000 10124000 14781000 10163000 19850000 17356000 23184000 18603000 19098000 45698000 36219 3676 32436 301988;301989;301990;301991;301992;301993;301994;301995;301996;301997;301998;301999 239040;239041;239042;239043 239043 4 MSIYQAMWK Unmodified 1156.5409 0.5409221 1802 P58107 EPPK1 Epiplakin yes no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 78.347 78.471 2 0.028187 90167 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.097 36.903 25857000 0 0 0 0 0 3834000 0 0 0 3482900 4601600 0 2200900 2982500 8755300 36220 1802 32437 302000;302001;302002;302003;302004;302005 239044;239045 239044 2 MSIYQAMWK Oxidation (M) 1172.5358 0.53583672 1802 P58107 EPPK1 Epiplakin yes no 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 69.282 69.315 2 0.030973 79603 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 42.835 30.69 14465000 0 0 0 2275300 1238200 0 1376200 2161300 1604900 1524800 2265200 0 0 0 2018900 36221 1802 32437 302006;302007;302008;302009;302010;302011;302012;302013 239046 239046 2922;2923 1 MSIYQAMWK 2 Oxidation (M) 1188.5308 0.53075134 1802 P58107 EPPK1 Epiplakin yes no 0 2 0 By MS/MS 10 0 1 1 52.094 51.453 2 0.0030082 58841 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 67.169 52.655 8238000 0 0 0 8238000 0 0 0 0 0 0 0 0 0 0 0 36222 1802 32437 302014 239047 239047 2922;2923 1 MSLDPADLTHDTTGLTAK Unmodified 1885.9091 0.90914267 5020 Q9UMX5 NENF Neudesin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.12 3.89 3 1 4 3 1 1 1 1 1 79.585 77.774 2;3 1.3172E-96 96327 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 233.52 204.45 933170000 0 885390000 8994000 0 0 0 0 0 0 0 4414000 8454000 0 7445800 18472000 36223 5020 32438 302015;302016;302017;302018;302019;302020;302021;302022 239048;239049;239050;239051 239048 4 MSLDPADLTHDTTGLTAK Oxidation (M) 1901.9041 0.90405729 5020 Q9UMX5 NENF Neudesin yes yes 0 1 0 By matching By MS/MS 2.67 0.471 1 2 1 2 75.048 71.226 3 0.001007 85625 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 46.543 41.639 7802900 283940 7518900 0 0 0 0 0 0 0 0 0 0 0 0 0 36224 5020 32438 302023;302024;302025 239052;239053 239053 6362 2 MSLEETK Oxidation (M) 852.38988 0.38988399 2255 Q13227 GPS2 G protein pathway suppressor 2 yes yes 0 1 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 8.7037 8.7937 2 0.02617 6712 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 68.915 44.943 11802000 0 0 0 0 914200 1260700 1276500 0 878320 2265200 0 3780300 0 1426900 0 36225 2255 32439 302026;302027;302028;302029;302030;302031;302032 239054 239054 1 MSLEFPTGDSTQPNGGLSHTGTPK Unmodified 2458.1435 0.14345271 4075 Q99962 SH3GL2 Endophilin-A1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 71.723 71.911 3 0.00043851 82750 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 33.074 25.622 33539000 0 0 0 0 0 6198200 2348900 0 0 4489500 4363900 4550500 2676900 0 8910800 36226 4075 32440 302033;302034;302035;302036;302037;302038;302039 239055;239056;239057;239058;239059 239055 5 MSLEQAK Unmodified 805.40039 0.4003891 296 O43148 RNMT mRNA cap guanine-N7 methyltransferase yes yes 0 0 0 By MS/MS 2 0 1 1 24.039 19.91 2 0.022419 26436 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.22 56.185 89489000 0 89489000 0 0 0 0 0 0 0 0 0 0 0 0 0 36227 296 32441 302040 239060 239060 1 MSLFYAEATPMLK 2 Oxidation (M) 1532.7255 0.72548798 4654 Q9NUQ9;Q9H0Q0 FAM49B;FAM49A Protein FAM49B;Protein FAM49A yes no 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 76.301 76.452 2 9.0379E-05 87618 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.261 67.57 116940000 0 0 0 0 0 14310000 8643100 0 10367000 13421000 14906000 26195000 12271000 0 16824000 36228 4654 32442 302041;302042;302043;302044;302045;302046;302047;302048 239061;239062;239063;239064;239065;239066;239067;239068 239064 6064;6065 8 MSLFYAEATPMLK Oxidation (M) 1516.7306 0.73057336 4654 Q9NUQ9;Q9H0Q0 FAM49B;FAM49A Protein FAM49B;Protein FAM49A yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 81.906 81.89 2 0.00044003 94415 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.781 64.982 41538000 0 0 0 1421100 1631000 5601800 0 0 0 0 7235400 6902900 0 0 18746000 36229 4654 32442 302049;302050;302051;302052;302053;302054 239069;239070;239071;239072 239070 6064;6065 4 MSLFYAEATPMLK Unmodified 1500.7357 0.73565874 4654 Q9NUQ9;Q9H0Q0 FAM49B;FAM49A Protein FAM49B;Protein FAM49A yes no 0 0 0 By MS/MS 10 0 1 1 86.486 86.645 2 0.011939 100161 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.136 59.033 5900700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5900700 36230 4654 32442 302055 239073 239073 0 MSLPDVDLDLK Oxidation (M) 1260.6272 0.62715415 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.75 3.85 4 1 7 2 2 1 1 1 1 1 1 1 1 78.717 77.807 2 8.3403E-05 95205 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.75 84.574 92628000 225050 42654000 2469600 0 5371300 0 5945900 6631000 5996600 0 0 9202100 7026000 7106500 0 36231 2172 32443 302056;302057;302058;302059;302060;302061;302062;302063;302064;302065;302066;302067 239074;239075;239076;239077;239078;239079;239080;239081;239082;239083;239084;239085 239075 3538 12 MSLPDVDLDLK Unmodified 1244.6322 0.63223953 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 88.389 83.243 2 0.014543 104731 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.14 63.137 176990000 17087000 155660000 4240200 0 0 0 0 0 0 0 0 0 0 0 0 36232 2172 32443 302068;302069;302070 239086;239087;239088 239086 3 MSLSSMEVDVQAPR Unmodified 1548.7276 0.72761325 3226 Q8IVF2 AHNAK2 Protein AHNAK2 yes no 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 76.24 76.353 2 0.00043785 87502 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.488 56.589 23280000 0 0 0 0 1414300 0 1169300 2473400 2014700 3049200 0 3648200 0 2302500 7208700 36233 3226 32444 302071;302072;302073;302074;302075;302076;302077;302078 239089 239089 1 MSLSSMEVDVQAPRAK Unmodified 1747.8597 0.85969005 3226 Q8IVF2 AHNAK2 Protein AHNAK2 yes no 0 0 1 By MS/MS 2 0 1 1 76.793 68.663 3 0.0040902 90504 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.888 33.75 14614000 14614000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36234 3226 32445 302079 239090 239090 1 MSMKEVDEQMLNVQNK 3 Oxidation (M) 1970.8747 0.87474777 1963;842;2350;4182 P07437;P68371;Q13885;Q9BVA1 TUBB;TUBB4B;TUBB2A;TUBB2B Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain no no 0 3 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 29.598 29.91 3 2.834E-05 32275 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 74.789 69.361 42237000 0 0 0 0 0 0 8975700 2990800 0 2672400 6416800 10118000 6572000 4491200 0 36235 842;1963;2350;4182 32446 302080;302081;302082;302083;302084;302085;302086 239091;239092;239093;239094 239091 1039;1043;1044 4 MSMTGAGK Unmodified 781.34625 0.34624504 3912 Q96KQ7 EHMT2 Histone-lysine N-methyltransferase EHMT2 yes yes 0 0 0 By MS/MS 2 0 1 1 13.861 10.546 2 0.031271 14221 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.189 51.003 41165000 0 41165000 0 0 0 0 0 0 0 0 0 0 0 0 0 36236 3912 32447 302087 239095 239095 1 MSNADFAK Oxidation (M) 898.38547 0.38546731 2475 Q15020 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 13.572 10.191 2 0.0378 13452 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.198 51.431 40639000 0 40639000 0 0 0 0 0 0 0 0 0 0 0 0 0 36237 2475 32448 302088;302089 239096 239096 1 MSNADFAK Unmodified 882.39055 0.39055269 2475 Q15020 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.74 20.945 2 0.01524 20411 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.198 46.269 135930000 0 0 0 5976200 4055800 7850400 7099300 5814300 4829900 13736000 14988000 17609000 18042000 17456000 18476000 36238 2475 32448 302090;302091;302092;302093;302094;302095;302096;302097;302098;302099;302100;302101 239097;239098 239097 2 MSNALAIQVDSEGK Oxidation (M) 1477.7083 0.70825802 2320 Q13573 SNW1 SNW domain-containing protein 1 yes yes 0 1 0 By MS/MS By MS/MS By matching 2.2 0.4 4 1 2 2 1 56.497 50.796 2 2.9372E-18 65003 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.34 111.82 33868000 4146000 27570000 2151400 0 0 0 0 0 0 0 0 0 0 0 0 36239 2320 32449 302102;302103;302104;302105;302106 239099;239100;239101;239102;239103 239099 3785 5 MSNALAIQVDSEGK Unmodified 1461.7133 0.71334339 2320 Q13573 SNW1 SNW domain-containing protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 63.747 58.411 2 0.00082355 74873 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.02 82.586 97506000 0 97506000 0 0 0 0 0 0 0 0 0 0 0 0 0 36240 2320 32449 302107;302108 239104 239104 1 MSNYDTDLFVPYFEAIQK Oxidation (M) 2196.0085 0.0085223609 1578 P49588 AARS Alanine--tRNA ligase, cytoplasmic yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 2 3 1 97.456 92.965 2;3 5.7933E-183 115526 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 240.73 213.76 540540000 41141000 485120000 14278000 0 0 0 0 0 0 0 0 0 0 0 0 36241 1578 32450 302109;302110;302111;302112;302113;302114 239105;239106;239107;239108;239109;239110 239106 2538 5 MSNYDTDLFVPYFEAIQK Unmodified 2180.0136 0.013607739 1578 P49588 AARS Alanine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 2 3 1 97.992 92.981 2;3 7.5552E-11 116487 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 143.56 124.17 167530000 59187000 103070000 5271100 0 0 0 0 0 0 0 0 0 0 0 0 36242 1578 32450 302115;302116;302117;302118;302119;302120 239111;239112;239113;239114;239115;239116 239114 4 MSPDEGQEELEEVQAELK Unmodified 2059.9256 0.92558059 4504 Q9HC07 TMEM165 Transmembrane protein 165 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 85.81 81.806 2 3.2802E-65 101490 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 166.62 145.61 33670000 0 33670000 0 0 0 0 0 0 0 0 0 0 0 0 0 36243 4504 32451 302121;302122 239117;239118 239117 2 MSPLDMK Unmodified 820.3823 0.38229619 5246 Q9Y5R8 TRAPPC1 Trafficking protein particle complex subunit 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 48.096 42.834 2 0.042813 55698 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.451 51.746 76899000 0 76899000 0 0 0 0 0 0 0 0 0 0 0 0 0 36244 5246 32452 302123;302124 239119 239119 1 MSPLDTYGIHTIK Oxidation (M) 1490.7439 0.74391524 5336 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 2 1 1 74.765 74.818 2 0.0051009 86248 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 45.161 15.688 + 329350000 0 0 0 40535000 17362000 0 14193000 97909000 21623000 25260000 48414000 40526000 23528000 0 0 36245 5336 32453 302125;302126;302127;302128;302129;302130;302131;302132;302133;302134 239120 239120 6730 1 MSPNETLFLESTNK Oxidation (M) 1625.7607 0.76068752 4498 Q9HB90;Q9NQL2 RRAGC;RRAGD Ras-related GTP-binding protein C;Ras-related GTP-binding protein D yes no 0 1 0 By MS/MS By MS/MS 2 0 3 2 1 71.38 66.335 2 1.953E-21 84027 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 142.08 131.78 56729000 0 55098000 1630700 0 0 0 0 0 0 0 0 0 0 0 0 36246 4498 32454 302135;302136;302137 239121;239122 239122 5935 1 MSPNETLFLESTNK Unmodified 1609.7658 0.76577289 4498 Q9HB90;Q9NQL2 RRAGC;RRAGD Ras-related GTP-binding protein C;Ras-related GTP-binding protein D yes no 0 0 0 By MS/MS 2 0 1 1 78.24 73.465 2 0.0015796 91816 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.243 65.091 123860000 0 123860000 0 0 0 0 0 0 0 0 0 0 0 0 0 36247 4498 32454 302138 239123;239124 239124 2 MSPTPPLFSLPEAR Acetyl (Protein N-term);Oxidation (M) 1599.7967 0.79667909 3839 Q96FV9 THOC1 THO complex subunit 1 yes yes 1 1 0 By MS/MS 10 0 1 1 91.841 92.045 2 0.00052814 106943 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 46.706 37.752 1571600 0 0 0 0 0 0 0 0 0 0 1571600 0 0 0 0 36248 3839 32455 302139 239125 239125 5358 1 MSQCTSSTIPSSSQEK Unmodified 1756.7608 0.76076387 5292 Q9Y6Q9 NCOA3 Nuclear receptor coactivator 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 25.895 26.1 2 0.0038305 27661 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 42.041 35.801 36134000 0 0 0 1756500 3365600 2830600 2772800 2996600 0 2091200 2839700 3298500 4689800 4101700 5391300 36249 5292 32456 302140;302141;302142;302143;302144;302145;302146;302147;302148;302149;302150 239126;239127;239128;239129;239130;239131 239130 6 MSQDDFQSPPIVELR Oxidation (M) 1776.8352 0.83524944 3895 Q96JJ3 ELMO2 Engulfment and cell motility protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.966 78.025 2 6.5742E-27 90116 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 127.37 105.18 71880000 0 0 0 3035700 3981100 4940400 5179700 4756500 4032800 6137600 8696200 8792600 6745200 5918900 9662900 36250 3895 32457 302151;302152;302153;302154;302155;302156;302157;302158;302159;302160;302161;302162 239132;239133;239134;239135;239136;239137;239138;239139;239140;239141;239142 239132 5397 11 MSQDDFQSPPIVELR Unmodified 1760.8403 0.84033482 3895 Q96JJ3 ELMO2 Engulfment and cell motility protein 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 80.218 80.321 2 0.00022828 92942 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 83.314 67.061 57732000 0 0 0 0 2777700 4257200 2479500 3757800 4187400 5450600 5356000 9738600 4207000 3005500 12514000 36251 3895 32457 302163;302164;302165;302166;302167;302168;302169;302170;302171;302172;302173 239143;239144;239145;239146;239147;239148;239149 239144 7 MSQDSMMK Unmodified 956.37656 0.37655889 2021 P98082 DAB2 Disabled homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 19.439 19.321 2 0.0019625 23717 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 153.04 138.25 186390000 0 77570000 0 3817200 3416700 4668400 5427700 4949000 4578200 10088000 10443000 9305100 7310900 12357000 32456000 36252 2021 32458 302174;302175;302176;302177;302178;302179;302180;302181;302182;302183;302184;302185;302186 239150;239151;239152;239153 239151 4 MSQDSMMK Oxidation (M) 972.37147 0.37147351 2021 P98082 DAB2 Disabled homolog 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 8.2006 8.4448 2 0.025927 6985 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 50.703 31.226 23536000 0 0 0 0 0 0 0 1708300 2549200 0 6016700 0 4136700 3328300 5796600 36253 2021 32458 302187;302188;302189;302190;302191;302192 239154;239155;239156 239156 3 MSQEEVNVFR Oxidation (M) 1253.571 0.57103625 3041 Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 46.111 46.331 2 0.00086549 51987 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 107.69 95.067 103320000 0 0 0 0 7935700 11346000 8709900 0 5873700 17249000 0 14813000 12087000 13494000 11811000 36254 3041 32459 302193;302194;302195;302196;302197;302198;302199;302200;302201;302202 239157;239158;239159;239160;239161;239162;239163;239164;239165;239166 239164 4659 10 MSQEEVNVFR Unmodified 1237.5761 0.57612163 3041 Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 54.595 54.005 2 0.0058496 62028 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 101.64 69.709 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36255 3041 32459 302203;302204 239167;239168 239167 2 MSQEEVNVFRLEMEGITVK Unmodified 2238.1024 0.10243952 3041 Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 0 0 1 By MS/MS 2 0 1 1 93.564 85.433 3 1.2948E-05 110635 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.027 63.084 13673000 13673000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36256 3041 32460 302205 239169 239169 1 MSQEGVELEK Acetyl (Protein N-term);Oxidation (M) 1206.5438 0.54381845 4648 Q9NUL5 C19orf66 UPF0515 protein C19orf66 yes yes 1 1 0 By MS/MS 2 0 1 1 30.118 25.725 2 0.0178 33633 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 51.854 17.602 11748000 0 11748000 0 0 0 0 0 0 0 0 0 0 0 0 0 36257 4648 32461 302206 239170 239170 6058 1 MSQLEVK Oxidation (M) 849.4266 0.42660385 1029 P15924 DSP Desmoplakin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 17.108 17.183 2 0.030934 17318 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 65.676 30.852 146810000 0 0 0 61526000 18900000 20362000 0 0 18096000 14633000 0 0 0 0 13293000 36258 1029 32462 302207;302208;302209;302210;302211;302212 239171;239172;239173 239173 3 MSQLEVK Unmodified 833.43169 0.43168922 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 14 2 1 1 1 1 1 1 2 1 1 1 1 26.738 26.925 2 0.018925 28941 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 111.04 33.661 765290000 0 0 0 160870000 33339000 45117000 38905000 141450000 27641000 50251000 58470000 75459000 75230000 28521000 30038000 36259 1029 32462 302213;302214;302215;302216;302217;302218;302219;302220;302221;302222;302223;302224;302225;302226 239174;239175;239176;239177;239178;239179;239180;239181 239180 8 MSQNFHTSYAETLGK Unmodified 1712.7828 0.78281994 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 56.261 50.209 3 0.016259 68140 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 23.527 19.174 55038000 48873000 0 6164400 0 0 0 0 0 0 0 0 0 0 0 0 36260 5049 32463 302227;302228 239182;239183;239184 239182 3 MSQNFHTSYAETLGK Oxidation (M) 1728.7777 0.77773456 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 1 0 By MS/MS 2 0 1 1 52.116 44.101 3 0.0081097 60933 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.723 40.064 29590000 29590000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36261 5049 32463 302229 239185 239185 6397 0 MSQPGSPSPK Unmodified 1014.4804 0.48043033 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 0 0 By MS/MS 2 0 1 1 15.264 11.924 2 0.031848 15870 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.246 39.464 25078000 0 25078000 0 0 0 0 0 0 0 0 0 0 0 0 0 36262 2451 32464 302230 239186 239186 1 MSQSHEDSLTSVAWNPDGK Unmodified 2087.9218 0.92183262 4434 Q9H7D7 WDR26 WD repeat-containing protein 26 yes yes 0 0 0 By MS/MS 2 0 1 1 68.864 62.965 3 6.075E-18 80270 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.56 101.4 36312000 0 36312000 0 0 0 0 0 0 0 0 0 0 0 0 0 36263 4434 32465 302231 239187 239187 1 MSQSIIVSGESGAGK Unmodified 1449.7133 0.71334339 5014 Q9UM54 MYO6 Unconventional myosin-VI yes yes 0 0 0 By MS/MS 2 0 2 2 49.283 43.606 2 8.5438E-40 56437 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 142.83 128.16 57588000 0 57588000 0 0 0 0 0 0 0 0 0 0 0 0 0 36264 5014 32466 302232;302233 239188;239189 239188 1 MSQSIIVSGESGAGK Oxidation (M) 1465.7083 0.70825802 5014 Q9UM54 MYO6 Unconventional myosin-VI yes yes 0 1 0 By MS/MS 2 0 1 1 39.673 34.661 2 0.026801 45248 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 47.189 29.325 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36265 5014 32466 302234 239190 239190 1 MSQVPAPVPLMSLR Oxidation (M) 1540.8106 0.81055502 5066 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 83.719 83.783 2 0.00017576 96078 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 79.693 72.43 79023000 0 0 0 3749000 2840300 4042100 4463100 6519200 6655400 6720200 8380300 8577100 5644900 9077600 12354000 36266 5066 32467 302235;302236;302237;302238;302239;302240;302241;302242;302243;302244;302245;302246 239191;239192;239193;239194;239195;239196;239197;239198;239199;239200;239201;239202;239203 239199 6423;6424 13 MSQVPAPVPLMSLR Unmodified 1524.8156 0.81564039 5066 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 86.061 86.161 2 0.017744 99956 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 47.559 31.668 34441000 0 0 0 0 1454500 1771700 0 3319000 1245500 4457400 2870400 4200900 2042800 3785200 9293800 36267 5066 32467 302247;302248;302249;302250;302251;302252;302253;302254;302255;302256 239204 239204 1 MSQVPAPVPLMSLR 2 Oxidation (M) 1556.8055 0.80546964 5066 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 75.451 75.6 2 0.00011918 87078 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 74.944 62.368 63050000 0 0 0 0 0 0 15638000 0 0 0 17953000 0 14722000 14736000 0 36268 5066 32467 302257;302258;302259;302260 239205;239206;239207;239208 239206 6423;6424 4 MSSEVVDSNPYSR Oxidation (M) 1485.6406 0.64057238 4311 Q9GZZ9 UBA5 Ubiquitin-like modifier-activating enzyme 5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 34.462 34.173 2 6.5825E-16 36706 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 147.91 137.08 130460000 0 24426000 0 7796800 5614300 12971000 10232000 6391700 6438800 11664000 12397000 0 10200000 6788000 15537000 36269 4311 32468 302261;302262;302263;302264;302265;302266;302267;302268;302269;302270;302271;302272;302273 239209;239210;239211;239212;239213;239214;239215;239216;239217;239218;239219;239220;239221 239213 5773 13 MSSEVVDSNPYSR Unmodified 1469.6457 0.64565776 4311 Q9GZZ9 UBA5 Ubiquitin-like modifier-activating enzyme 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 42.584 42.331 2 5.2118E-12 47593 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 123.67 110.86 363340000 0 115260000 0 7843300 9262500 26511000 15447000 12592000 9234500 28671000 21287000 29768000 18742000 17526000 51204000 36270 4311 32468 302274;302275;302276;302277;302278;302279;302280;302281;302282;302283;302284;302285;302286 239222;239223;239224;239225;239226;239227;239228;239229;239230;239231;239232;239233;239234;239235;239236 239223 13 MSSFGDFVALSDVCDVPTAK Oxidation (M) 2160.9708 0.97075665 1307 P31939 ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 87.986 88.147 2 1.5709E-58 101992 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 127.76 122.58 18111000 0 0 0 0 0 0 0 0 0 0 3480600 2871900 0 0 11758000 36271 1307 32469 302287;302288;302289 239237;239238;239239 239237 1929 3 MSSFGDFVALSDVCDVPTAK Unmodified 2144.9758 0.97584202 1307 P31939 ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes yes 0 0 0 By MS/MS 10 0 1 1 90.272 90.41 2 0.0014574 104672 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.644 38.606 2988100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2988100 36272 1307 32469 302290 239240 239240 1 MSSPEDDSDTK Unmodified 1210.466 0.46596206 2532 Q15424 SAFB Scaffold attachment factor B1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 10.103 10.244 2 0.0083399 7187 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 51.762 48.016 39904000 0 0 0 2377800 1838200 2663600 2634500 1992500 1842600 3270400 4077000 5784600 3486900 3243900 6692400 36273 2532 32470 302291;302292;302293;302294;302295;302296;302297;302298;302299;302300;302301;302302 239241;239242;239243;239244;239245;239246 239244 6 MSSPEDDSDTK Oxidation (M) 1226.4609 0.46087668 2532 Q15424 SAFB Scaffold attachment factor B1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 6.0595 6.1892 2 0.00019603 3052 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 90.108 88.242 20225000 0 0 0 1094500 1188200 0 1836200 1231100 1642300 1816200 1970300 2867700 2102100 2351000 2125700 36274 2532 32470 302303;302304;302305;302306;302307;302308;302309;302310;302311;302312;302313 239247;239248;239249;239250;239251;239252;239253;239254;239255;239256 239253 4168 10 MSSPLADAK Unmodified 918.44807 0.44806757 1600 P49790 NUP153 Nuclear pore complex protein Nup153 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 33.084 33.325 2 0.013293 36443 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 60.019 21.886 248590000 0 0 0 13765000 0 13154000 15284000 18184000 11974000 27276000 26838000 34659000 26334000 18304000 42820000 36275 1600 32471 302314;302315;302316;302317;302318;302319;302320;302321;302322;302323;302324 239257;239258;239259;239260;239261;239262;239263 239260 7 MSSPLADAK Oxidation (M) 934.44298 0.44298219 1600 P49790 NUP153 Nuclear pore complex protein Nup153 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 21.03 20.694 2 0.013178 21158 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 53.493 31.723 101730000 0 17953000 0 7244100 6194900 0 8518100 6951000 9965000 13318000 0 13468000 18120000 0 0 36276 1600 32471 302325;302326;302327;302328;302329;302330;302331;302332;302333;302334 239264;239265;239266;239267;239268;239269;239270 239268 2574 6 MSSSDTPLGTVALLQEK Unmodified 1775.8975 0.89751535 312 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.08 1 1 22 2 2 1 2 2 2 2 2 2 2 1 2 2 83.892 83.626 2;3 9.4433E-14 96458 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.183 83.651 305780000 0 149630000 0 3344500 3297100 5716700 11839000 12408000 16140000 16047000 15862000 21682000 6395300 17784000 25636000 36277 312 32472 302335;302336;302337;302338;302339;302340;302341;302342;302343;302344;302345;302346;302347;302348;302349;302350;302351;302352;302353;302354;302355;302356;302357;302358 239271;239272;239273;239274;239275;239276;239277;239278;239279;239280;239281;239282 239273 12 MSSSDTPLGTVALLQEK Oxidation (M) 1791.8924 0.89242997 312 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes yes 0 1 0 By MS/MS 2.33 0.471 2 1 3 85.378 81.111 2;3 1.8917E-18 100852 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.12 105.43 97063000 0 97063000 0 0 0 0 0 0 0 0 0 0 0 0 0 36278 312 32472 302359;302360;302361 239283;239284;239285 239283 404 3 MSSSEEESK Oxidation (M) 1028.3968 0.39681986 1740 P54577 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed yes yes 0 1 0 By MS/MS By MS/MS 1 0 2 1 1 106.68 109.76 2 0.00053021 99761 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 122.52 122.52 218620000 100290000 118330000 0 0 0 0 0 0 0 0 0 0 0 0 0 36279 1740 32473 302362;302363 239286;239287 239287 2824 2 MSSSEEESK Unmodified 1012.4019 0.40190524 1740 P54577 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS 1 0 1 1 106.78 112.04 2 0.0039447 92792 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 114.89 114.89 46564000 46564000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36280 1740 32473 302364 239288 239288 1 MSSSTSSLTSSSSFSDGFK Oxidation (M) 1944.8259 0.82586655 4288 Q9C0D5 TANC1 Protein TANC1 yes yes 0 1 0 By matching By matching By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 61.556 61.589 2 6.6532E-39 70220 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 116.84 103.64 19023000 0 0 0 2340500 0 3284300 0 0 0 0 0 6120400 3305800 3972400 0 36281 4288 32474 302365;302366;302367;302368;302369;302370 239289;239290;239291 239291 5755 3 MSSSTSSLTSSSSFSDGFK Unmodified 1928.831 0.83095193 4288 Q9C0D5 TANC1 Protein TANC1 yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 65.866 65.439 2 1.2832E-05 82526 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.14 98.48 55055000 0 26424000 0 0 0 4010400 1657300 2873000 1846600 0 4040700 4868000 0 3963100 5371700 36282 4288 32474 302371;302372;302373;302374;302375;302376;302377;302378;302379 239292;239293;239294;239295 239292 4 MSSSVISYQDLVK Oxidation (M) 1471.7228 0.72284545 4459 Q9H900 ZWILCH Protein zwilch homolog yes yes 0 1 0 By MS/MS 2 0 1 1 78.043 73.268 2 7.4598E-06 91317 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.93 82.151 53398000 0 53398000 0 0 0 0 0 0 0 0 0 0 0 0 0 36283 4459 32475 302380 239296 239296 5897 1 MSSSVISYQDLVK Unmodified 1455.7279 0.72793082 4459 Q9H900 ZWILCH Protein zwilch homolog yes yes 0 0 0 By MS/MS 2 0 1 1 80.525 75.813 2 0.0021106 94379 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.215 75.185 263410000 0 263410000 0 0 0 0 0 0 0 0 0 0 0 0 0 36284 4459 32475 302381 239297 239297 1 MSSTFIGNSTAIQELFK Unmodified 1872.9291 0.92914983 2306 Q13509 TUBB3 Tubulin beta-3 chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 93.197 90.572 2;3 0.00011091 114643 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.055 0 236260000 70342000 0 0 0 0 0 0 0 0 12224000 0 0 0 0 153700000 36285 2306 32476 302382;302383;302384 239298;239299;239300;239301 239301 4 MSSTFIGNSTAIQELFK Oxidation (M) 1888.9241 0.92406445 2306 Q13509 TUBB3 Tubulin beta-3 chain yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 91.68 90.478 2 1.5322E-10 105074 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.412 82.002 70233000 21212000 20037000 0 0 1100200 0 1447000 2881300 1994700 0 4818800 4305100 0 2692300 9744300 36286 2306 32476 302385;302386;302387;302388;302389;302390;302391;302392;302393;302394 239302;239303;239304;239305;239306;239307 239303 3771 6 MSSTIFSTGGK Unmodified 1114.5329 0.53285983 2248 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 47.682 47.918 2 0.0021805 52858 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 68.893 40.719 16794000 0 0 0 0 0 0 0 0 0 0 0 0 0 16794000 0 36287 2248 32477 302395;302396 239308;239309 239309 2 MSSTIFSTGGK Oxidation (M) 1130.5278 0.52777445 2248 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 36.513 36.88 2 0.0016022 39572 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.726 48.022 58791000 0 0 0 0 0 0 5828300 2718300 5991700 0 8848000 11599000 6184700 5344200 12276000 36288 2248 32477 302397;302398;302399;302400;302401;302402;302403;302404 239310;239311;239312 239310 3649 2 MSSYAFFVQTCR Oxidation (M) 1511.6537 0.65372002 883;1207 P26583;P09429;B2RPK0 HMGB2;HMGB1;HMGB1P1 High mobility group protein B2;High mobility group protein B1;Putative high mobility group protein B1-like 1 no no 0 1 0 By MS/MS 10 0 1 1 73.186 73.556 2 0.0022974 84161 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.255 53.722 9262700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9262700 36289 1207;883 32478 302405 239313 239313 1138 1 MSSYAFFVQTCREEHK Unmodified 2018.8979 0.89786647 883;1207 P26583;P09429;B2RPK0 HMGB2;HMGB1;HMGB1P1 High mobility group protein B2;High mobility group protein B1;Putative high mobility group protein B1-like 1 no no 0 0 1 By MS/MS 10 0 1 1 63.21 63.773 3 0.0072246 72563 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.597 5.5077 16380000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16380000 36290 1207;883 32479 302406 239314 239314 1 MSTEEIIQR Oxidation (M) 1121.5387 0.53867349 1066 P17980 PSMC3 26S protease regulatory subunit 6A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 31.605 31.107 2 0.00071928 33426 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 143.12 126.98 281270000 0 44542000 0 14958000 19247000 20704000 10128000 8046000 6556300 32623000 36557000 55464000 9008200 9306800 14130000 36291 1066 32480 302407;302408;302409;302410;302411;302412;302413;302414;302415;302416;302417;302418;302419;302420 239315;239316;239317;239318;239319;239320;239321;239322;239323;239324;239325;239326;239327 239325 1508 13 MSTEEIIQR Unmodified 1105.5438 0.54375887 1066 P17980 PSMC3 26S protease regulatory subunit 6A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 44.156 44.312 2 0.00069849 50021 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 144.38 122.24 443300000 0 0 0 29724000 40190000 61301000 16644000 17001000 16289000 49494000 75251000 80961000 0 16684000 39756000 36292 1066 32480 302421;302422;302423;302424;302425;302426;302427;302428;302429;302430;302431 239328;239329;239330;239331;239332;239333;239334;239335;239336;239337;239338;239339;239340 239340 13 MSTEEIIQRTR Unmodified 1362.6925 0.69254837 1066 P17980 PSMC3 26S protease regulatory subunit 6A yes yes 0 0 1 By MS/MS 2 0 1 1 54.591 46.482 3 0.0035672 63586 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.258 44.648 124550000 124550000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36293 1066 32481 302432 239341 239341 1 MSTMTPK Unmodified 794.36665 0.36664613 2519 Q15363 TMED2 Transmembrane emp24 domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 14.969 15.126 2 0.023899 13713 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.262 63.593 70215000 0 0 0 0 4265100 5379600 5843600 8670300 3184600 8857300 0 8786700 10801000 0 14427000 36294 2519 32482 302433;302434;302435;302436;302437;302438;302439;302440;302441 239342 239342 1 MSTSPEAFLALR Oxidation (M) 1337.6649 0.66493664 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 79.332 79.477 2 1.6284E-26 91644 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 166.07 139.68 423520000 0 0 0 0 0 41659000 0 50249000 0 64308000 59948000 77186000 0 55011000 75161000 36295 1986 32483 302442;302443;302444;302445;302446;302447;302448;302449 239343;239344;239345;239346;239347;239348;239349 239347 3225 6 MSTSPEAFLALR Unmodified 1321.67 0.67002202 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 83.121 83.184 2 2.1679E-05 95825 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 125.97 97.76 167580000 0 0 0 2462500 4076400 6601600 3408000 12045000 2427100 10689000 10714000 26937000 9154000 15747000 63322000 36296 1986 32483 302450;302451;302452;302453;302454;302455;302456;302457;302458;302459;302460;302461 239350;239351;239352;239353;239354;239355;239356;239357;239358;239359;239360;239361;239362;239363 239354 14 MSTVSELR Oxidation (M) 937.45388 0.45388123 4043 Q99661 KIF2C Kinesin-like protein KIF2C yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.692 21.898 2 0.0030817 22323 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 130.64 76.067 209760000 0 0 0 11861000 12759000 17595000 17274000 19655000 13247000 14618000 22670000 27581000 21032000 12413000 19055000 36297 4043 32484 302462;302463;302464;302465;302466;302467;302468;302469;302470;302471;302472;302473 239364;239365;239366;239367;239368;239369;239370;239371;239372;239373;239374;239375;239376;239377 239369 5547 13 MSTVSELR Unmodified 921.45897 0.45896661 4043 Q99661 KIF2C Kinesin-like protein KIF2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 31.975 32.164 2 0.013375 34401 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 72.492 51.192 200380000 0 0 0 12218000 12858000 15662000 15650000 0 14089000 17800000 25367000 22628000 19586000 14726000 29800000 36298 4043 32484 302474;302475;302476;302477;302478;302479;302480;302481;302482;302483;302484 239378;239379;239380;239381;239382 239382 4 MSVAGLK Acetyl (Protein N-term);Oxidation (M) 762.39458 0.39457544 4074;4075 Q99961;Q99963;Q99962 SH3GL1;SH3GL3;SH3GL2 Endophilin-A2;Endophilin-A3;Endophilin-A1 no no 1 1 0 By MS/MS By MS/MS 3 0 2 1 1 31.218 26.507 2 0.04657 33010 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 44.611 17.294 2560200 205880 2354300 0 0 0 0 0 0 0 0 0 0 0 0 0 36299 4074;4075 32485 302485;302486 239383 239383 0 MSVDAVEIETLR Oxidation (M) 1377.681 0.68098063 1977 P78347 GTF2I General transcription factor II-I yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 2 2 1 1 2 2 1 2 68.982 68.827 2 7.5592E-05 79038 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 87.568 64.214 31865000 0 0 0 6591100 6555500 0 0 0 0 0 4076000 5534100 6730800 2377600 0 36300 1977 32486 302487;302488;302489;302490;302491;302492;302493;302494;302495;302496;302497;302498;302499 239384;239385;239386;239387;239388;239389;239390;239391;239392;239393 239390 3186 8 MSVDAVEIETLRK Oxidation (M) 1505.7759 0.77594365 1977 P78347 GTF2I General transcription factor II-I yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 27 3 2 2 2 2 2 2 3 3 1 3 2 56.976 57.056 2;3 9.2366E-11 64960 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 131.83 114.88 929030000 0 0 0 88250000 82003000 102660000 87788000 61775000 71080000 68993000 139900000 16230000 71930000 75108000 63319000 36301 1977 32487 302500;302501;302502;302503;302504;302505;302506;302507;302508;302509;302510;302511;302512;302513;302514;302515;302516;302517;302518;302519;302520;302521;302522;302523;302524;302525;302526 239394;239395;239396;239397;239398;239399;239400;239401;239402;239403;239404;239405;239406;239407;239408;239409;239410;239411;239412;239413;239414;239415;239416;239417 239396 3186 21 MSVDAVEIETLRK Unmodified 1489.781 0.78102903 1977 P78347 GTF2I General transcription factor II-I yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 2 24 1 1 2 2 2 2 2 2 2 2 2 2 2 2 68.677 68.629 2;3 0.00019909 77967 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 66.285 59.868 1107800000 0 0 6474300 36402000 41302000 110950000 45250000 72661000 77420000 112910000 116310000 137440000 85600000 84646000 180400000 36302 1977 32487 302527;302528;302529;302530;302531;302532;302533;302534;302535;302536;302537;302538;302539;302540;302541;302542;302543;302544;302545;302546;302547;302548;302549;302550;302551;302552 239418;239419;239420;239421;239422;239423;239424;239425;239426;239427;239428;239429;239430;239431;239432;239433;239434;239435;239436;239437;239438;239439 239433 20 MSVEADINGLR Unmodified 1203.5918 0.59177169 56;68 CON__P02533;P02533;CON__P08727;P08727 KRT14;KRT19 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 19 no no 0 0 0 By matching By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 65.092 65.249 2 0.024333 74923 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 41.117 18.537 + 27806000 0 0 0 0 0 3448000 0 9105100 0 0 7596400 0 7656800 0 0 36303 56;68 32488 302553;302554;302555;302556 239440 239440 1 MSVEADINGLRR Oxidation (M) 1375.6878 0.68779734 56;68 CON__P02533;P02533;CON__P08727;P08727 KRT14;KRT19 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 19 no no 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 48.122 48.338 3 1.2714E-06 54662 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 110.66 97.525 + 1228700000 0 0 0 0 89078000 113030000 104950000 167630000 76143000 0 0 147330000 352220000 83183000 95126000 36304 56;68 32489 302557;302558;302559;302560;302561;302562;302563;302564;302565 239441;239442;239443;239444;239445;239446;239447;239448;239449;239450 239441 59 9 MSVEADINGLRR Unmodified 1359.6929 0.69288272 56;68 CON__P02533;P02533;CON__P08727;P08727 KRT14;KRT19 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 19 no no 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 20 1 2 2 1 2 2 2 2 2 2 1 1 57.025 57.158 2;3 7.6684E-06 65444 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 101.93 93.519 + 682910000 0 0 0 54094000 32738000 52866000 18729000 113650000 27797000 64938000 69208000 81467000 104200000 25573000 37656000 36305 56;68 32489 302566;302567;302568;302569;302570;302571;302572;302573;302574;302575;302576;302577;302578;302579;302580;302581;302582;302583;302584;302585 239451;239452;239453;239454;239455;239456;239457;239458;239459;239460;239461;239462 239462 8 MSVLNMVVR Unmodified 1047.5569 0.55690651 2654 Q2NL82 TSR1 Pre-rRNA-processing protein TSR1 homolog yes yes 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 80.134 80.223 2 0.0029277 92336 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 125.25 107.87 26646000 0 0 0 1109400 0 1925000 1310400 2145500 1357500 2804700 2076400 2934800 1701800 2514600 6765400 36306 2654 32490 302586;302587;302588;302589;302590;302591;302592;302593;302594;302595;302596 239463;239464 239463 2 MSVLSEVTASSRHYVDR Unmodified 1935.9473 0.94725951 3220 Q8IUR7 ARMC8 Armadillo repeat-containing protein 8 yes yes 0 0 1 By MS/MS 10 0 1 1 38.745 39.209 3 0.044376 43310 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 21.841 0 6665900 0 0 0 0 0 0 0 0 0 0 6665900 0 0 0 0 36307 3220 32491 302597 239465 239465 0 MSVQPTVSLGGFEITPPVVLR Oxidation (M) 2242.2031 0.20313984 830 P06748 NPM1 Nucleophosmin yes yes 0 1 0 By MS/MS 10 0 2 2 95.785 95.94 2;3 1.2394E-07 111245 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.034 60.31 9510300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9510300 36308 830 32492 302598;302599 239466;239467;239468 239468 1013 3 MSVQPTVSLGGFEITPPVVLRLK Oxidation (M) 2483.3822 0.38216684 830 P06748 NPM1 Nucleophosmin yes yes 0 1 1 By MS/MS 2 0 1 1 98.557 90.427 3 2.676E-05 116526 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.881 65.635 52838000 52838000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36309 830 32493 302600 239469 239469 1013 1 MSYAANLK Unmodified 896.44259 0.44258826 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 39.928 34.082 2 0.013526 47166 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.473 66.861 127710000 32406000 95309000 0 0 0 0 0 0 0 0 0 0 0 0 0 36310 619 32494 302601;302602 239470;239471 239471 2 MTAAQPSETTVGNMVR Unmodified 1691.7971 0.7970898 1598 P49770 EIF2B2 Translation initiation factor eIF-2B subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 55.029 55.38 2 0.00028469 62084 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.045 69.382 7628400 0 0 0 0 0 2491600 0 0 0 0 0 0 0 0 5136800 36311 1598 32495 302603;302604;302605 239472;239473 239472 2 MTAEEMASDELK 2 Oxidation (M) 1385.569 0.56904692 1149 P23193 TCEA1 Transcription elongation factor A protein 1 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 23 1 1 1 3 1 2 2 2 3 2 1 4 29.17 29.454 2 4.9342E-06 32088 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 106.62 86.832 98586000 0 0 0 2575300 1378300 1548900 9359700 1836700 5334100 7155400 10216000 15825000 7696700 3509100 32150000 36312 1149 32496 302606;302607;302608;302609;302610;302611;302612;302613;302614;302615;302616;302617;302618;302619;302620;302621;302622;302623;302624;302625;302626;302627;302628 239474;239475;239476;239477;239478;239479;239480;239481;239482;239483;239484;239485;239486;239487;239488;239489;239490;239491 239487 1646;1647 17 MTAEEMASDELK Unmodified 1353.5792 0.57921768 1149 P23193 TCEA1 Transcription elongation factor A protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 58.678 58.358 2 2.5066E-08 66420 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 157.78 149.73 210770000 0 93717000 0 0 8121000 5025600 7984500 7668900 6509900 7729200 15113000 10298000 8194800 13415000 26995000 36313 1149 32496 302629;302630;302631;302632;302633;302634;302635;302636;302637;302638;302639;302640;302641 239492;239493;239494;239495;239496;239497;239498;239499;239500;239501;239502;239503;239504;239505;239506 239500 15 MTAEEMASDELK Oxidation (M) 1369.5741 0.5741323 1149 P23193 TCEA1 Transcription elongation factor A protein 1 yes yes 0 1 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 3 1 1 2 1 1 42.527 42.748 2 9.9492E-05 51200 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.014 73.967 44359000 0 0 0 2561200 0 2018900 6647200 0 0 3588300 0 9701800 7777500 0 12064000 36314 1149 32496 302642;302643;302644;302645;302646;302647;302648;302649;302650;302651;302652 239507;239508;239509;239510;239511;239512;239513 239509 1646;1647 7 MTAMANEESR Unmodified 1138.4747 0.47469303 2712 Q567U6 CCDC93 Coiled-coil domain-containing protein 93 yes yes 0 0 0 By MS/MS 10 0 1 1 16.743 17.256 2 0.030743 16404 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.859 48.271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36315 2712 32497 302653 239514 239514 1 MTANSVLEPGNSEVSLVCEK Oxidation (M) 2179.0137 0.013684093 916 P10155 TROVE2 60 kDa SS-A/Ro ribonucleoprotein yes yes 0 1 0 By MS/MS 2.33 0.471 2 1 3 76.267 71.856 2;3 0.00016313 89650 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 50.424 43.71 289890000 0 289890000 0 0 0 0 0 0 0 0 0 0 0 0 0 36316 916 32498 302654;302655;302656 239515;239516 239515 1185 2 MTANSVLEPGNSEVSLVCEK Unmodified 2163.0188 0.018769471 916 P10155 TROVE2 60 kDa SS-A/Ro ribonucleoprotein yes yes 0 0 0 By MS/MS 2.4 0.49 3 2 5 79.356 75.314 2;3 1.9024E-18 90600 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 106.52 94.548 1020800000 0 1020800000 0 0 0 0 0 0 0 0 0 0 0 0 0 36317 916 32498 302657;302658;302659;302660;302661 239517;239518;239519;239520 239518 3 MTATGSGENSTVAEHLIAQHSAIK Unmodified 2452.2016 0.20163629 3053 Q7L5N1 COPS6 COP9 signalosome complex subunit 6 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 63.679 63.776 3 1.0755E-28 72214 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.593 75.4 17910000 0 0 0 0 0 4567800 0 5649500 0 7692400 0 0 0 0 0 36318 3053 32499 302662;302663;302664;302665 239521;239522 239522 2 MTATGSGENSTVAEHLIAQHSAIK Oxidation (M) 2468.1966 0.19655092 3053 Q7L5N1 COPS6 COP9 signalosome complex subunit 6 yes yes 0 1 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 60.427 60.514 3 6.5171E-18 69139 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 81.312 73.223 69492000 0 0 0 2694900 2680000 8943400 0 6159300 0 10444000 10222000 10961000 0 2695400 14693000 36319 3053 32499 302666;302667;302668;302669;302670;302671;302672;302673;302674 239523;239524;239525;239526;239527;239528;239529;239530 239526 4680 8 MTAVFEK Oxidation (M) 840.40514 0.40514012 2999 Q6ZMI0 PPP1R21 Protein phosphatase 1 regulatory subunit 21 yes yes 0 1 0 By MS/MS By matching 2 0 2 1 1 25.748 22.137 2 0.037971 29085 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.116 34.505 17758000 0 17231000 526840 0 0 0 0 0 0 0 0 0 0 0 0 36320 2999 32500 302675;302676 239531 239531 1 MTDEEIMEK 2 Oxidation (M) 1156.4628 0.46279094 2248 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.45 1 1 2 11 2 2 1 1 1 1 1 1 1 1 1 1 1 20.064 19.797 2 0.0018716 12581 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 76.827 65.758 82920000 15380000 17583000 0 4023600 2478700 5119700 4080200 2299100 2617500 6753600 5777600 6611200 4862700 0 5332400 36321 2248 32501 302677;302678;302679;302680;302681;302682;302683;302684;302685;302686;302687;302688;302689;302690;302691 239532;239533;239534;239535;239536;239537;239538;239539;239540;239541;239542;239543;239544 239539 3650;3651 12 MTDEEIMEK Oxidation (M) 1140.4679 0.46787631 2248 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.8 2.86 3 17 1 2 2 1 2 1 2 1 2 2 2 2 23.456 23.007 2 0.0083756 25640 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.892 42.906 150530000 4194100 57637000 0 7244600 2737600 0 11806000 2797800 0 10655000 5669500 13231000 9998800 10878000 13679000 36322 2248 32501 302692;302693;302694;302695;302696;302697;302698;302699;302700;302701;302702;302703;302704;302705;302706;302707;302708;302709;302710;302711 239545;239546;239547;239548;239549;239550;239551;239552;239553;239554;239555;239556;239557 239550 3650;3651 13 MTDEEIMEK Unmodified 1124.473 0.47296169 2248 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 34.828 35.023 2 0.03281 37356 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 47.187 17.714 90140000 0 0 0 6813100 3732800 0 6555900 6805200 0 0 16803000 16824000 0 12667000 19939000 36323 2248 32501 302712;302713;302714;302715;302716;302717;302718;302719 239558;239559 239559 2 MTDGYSGSDLTALAK Unmodified 1528.7079 0.70792366 4848 Q9UBP0 SPAST Spastin yes yes 0 0 0 By MS/MS 2 0 1 1 71.39 65.573 2 0.00015317 83404 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.105 82.215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36324 4848 32502 302720 239560 239560 1 MTDIMTEGITIVEDINK Oxidation (M) 1937.9326 0.93258023 1857 P61764 STXBP1 Syntaxin-binding protein 1 yes yes 0 1 0 By MS/MS 2 0 1 1 98.338 93.603 3 0.00016559 115869 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.673 57.854 18780000 0 18780000 0 0 0 0 0 0 0 0 0 0 0 0 0 36325 1857 32503 302721 239561 239561 3014;3015 1 MTDIMTEGITIVEDINK Unmodified 1921.9377 0.9376656 1857 P61764 STXBP1 Syntaxin-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2.12 0.331 7 1 3 5 99.056 93.624 2;3 6.8038E-19 117251 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.347 61.041 144210000 23695000 120520000 0 0 0 0 0 0 0 0 0 0 0 0 0 36326 1857 32503 302722;302723;302724;302725;302726;302727;302728;302729 239562;239563;239564;239565;239566;239567 239562 5 MTDIMTEGITIVEDINK 2 Oxidation (M) 1953.9275 0.92749485 1857 P61764 STXBP1 Syntaxin-binding protein 1 yes yes 0 2 0 By MS/MS 2 0 1 1 90.141 85.245 2 0.0049963 105901 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 50.222 44.25 10616000 0 10616000 0 0 0 0 0 0 0 0 0 0 0 0 0 36327 1857 32503 302730 239568 239568 3014;3015 0 MTDLTSSIPK Oxidation (M) 1107.5482 0.54817555 4593 Q9NR50 EIF2B3 Translation initiation factor eIF-2B subunit gamma yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 47.112 47.232 2 0.011376 53135 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 49.06 25.631 24482000 0 0 0 5013800 0 4997400 4156800 0 0 0 0 0 5194600 0 5119200 36328 4593 32504 302731;302732;302733;302734;302735 239569 239569 5997 1 MTDQEAIQDLWQWRK Oxidation (M) 1962.9258 0.92579578 830 P06748 NPM1 Nucleophosmin yes yes 0 1 1 By MS/MS 10 0 1 1 81.881 82.083 3 0.00097265 94650 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.914 39.812 10624000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10624000 36329 830 32505 302736 239570 239570 1014 1 MTDSFTEQADQVTAEVGK Oxidation (M) 1971.8732 0.87315109 882 P09417 QDPR Dihydropteridine reductase yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 73.026 67.99 2 3.0079E-226 85897 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 253.69 231.81 33840000 0 33840000 0 0 0 0 0 0 0 0 0 0 0 0 0 36330 882 32506 302737;302738 239571 239571 1136 1 MTDSFTEQADQVTAEVGK Unmodified 1955.8782 0.87823647 882 P09417 QDPR Dihydropteridine reductase yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 76.501 72.304 2 0.0084881 90374 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.887 58.837 186970000 0 186970000 0 0 0 0 0 0 0 0 0 0 0 0 0 36331 882 32506 302739;302740 239572 239572 1 MTEAQEDGQSTSELIGQFGVGFYSAFLVADK Unmodified 3324.5496 0.54963869 1002 P14625 HSP90B1 Endoplasmin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 100.74 96.296 3 1.3599E-21 100838 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 79.911 77.592 66375000 46927000 16249000 3198800 0 0 0 0 0 0 0 0 0 0 0 0 36332 1002 32507 302741;302742;302743;302744;302745 239573;239574;239575;239576 239574 4 MTEAQEDGQSTSELIGQFGVGFYSAFLVADK Oxidation (M) 3340.5446 0.54455332 1002 P14625 HSP90B1 Endoplasmin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.5 0.5 2 2 2 1 1 100.27 95.901 3 2.3237E-44 119551 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.261 91.997 48676000 34466000 8317400 5892300 0 0 0 0 0 0 0 0 0 0 0 0 36333 1002 32507 302746;302747;302748;302749 239577;239578;239579;239580 239579 1362 4 MTEDALR Oxidation (M) 850.38547 0.38546731 3594 Q8WXI9 GATAD2B Transcriptional repressor p66-beta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.899 12.048 2 0.04343 10748 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 51.787 27.601 39531000 0 0 0 2432500 2376900 3621800 3592500 0 2461600 4049000 4054000 5003600 4502200 3213300 4224000 36334 3594 32508 302750;302751;302752;302753;302754;302755;302756;302757;302758;302759;302760 239581 239581 1 MTEESSDVPRELIESIK Acetyl (Protein N-term);Oxidation (M) 2019.9671 0.96705148 2833 Q5VZK9 LRRC16A Leucine-rich repeat-containing protein 16A yes yes 1 1 1 By MS/MS 3 0 1 1 87.304 84.089 2 0.00094597 100704 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 52.928 38.965 3244200 0 3244200 0 0 0 0 0 0 0 0 0 0 0 0 0 36335 2833 32509 302761 239582 239582 4494 1 MTEIQTPENTPR Oxidation (M) 1431.6664 0.6663932 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 33.623 33.809 2 1.2709E-17 37187 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 146.11 129.08 153230000 0 0 0 5684700 7865200 15520000 8878500 9171500 8316500 14759000 21868000 19653000 14100000 11279000 16132000 36336 4634 32510 302762;302763;302764;302765;302766;302767;302768;302769;302770;302771;302772;302773;302774 239583;239584;239585;239586;239587;239588;239589;239590;239591;239592;239593;239594;239595;239596;239597;239598 239594 6036 15 MTEIQTPENTPR Unmodified 1415.6715 0.67147858 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 40.982 40.716 2 3.2634E-08 45211 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 153.97 130.65 167820000 0 17932000 0 0 8408400 0 0 12837000 7031500 21669000 17480000 24443000 11816000 17245000 28955000 36337 4634 32510 302775;302776;302777;302778;302779;302780;302781;302782;302783;302784;302785;302786;302787 239599;239600;239601;239602;239603;239604;239605;239606;239607;239608;239609;239610;239611 239605 12 MTEIQTPENTPRLFDLVK Unmodified 2131.0983 0.098340421 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 91.064 84.551 3 9.5686E-08 107701 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.922 85.638 53782000 28826000 24955000 0 0 0 0 0 0 0 0 0 0 0 0 0 36338 4634 32511 302788;302789 239612;239613;239614 239614 3 MTEIQTPENTPRLFDLVK Oxidation (M) 2147.0933 0.093255043 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 1 1 By MS/MS 2 0 1 1 89.184 81.053 3 3.821E-05 105409 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.54 74.717 21954000 21954000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36339 4634 32511 302790 239615;239616 239616 6036 2 MTELADVFSGVK Oxidation (M) 1311.6381 0.63805318 2183 Q12768 KIAA0196 WASH complex subunit strumpellin yes yes 0 1 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 77.786 77.86 2 1.3268E-05 90285 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 104.52 92.675 27740000 0 0 0 0 2523800 0 4858100 0 0 0 4994200 5130000 5908600 4324900 0 36340 2183 32512 302791;302792;302793;302794;302795;302796 239617;239618;239619 239619 3553 3 MTELADVFSGVK Unmodified 1295.6431 0.64313856 2183 Q12768 KIAA0196 WASH complex subunit strumpellin yes yes 0 0 0 By matching By matching By matching By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 82.047 82.096 2 0.0059699 95149 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 62.303 50.813 10229000 0 0 0 0 945730 2161500 0 1523000 0 0 0 2095200 1179900 2323400 0 36341 2183 32512 302797;302798;302799;302800;302801;302802 239620 239620 1 MTETPIQEEQASIK Unmodified 1603.7763 0.77633758 2987 Q6VN20 RANBP10 Ran-binding protein 10 yes yes 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 52.639 52.728 2 0.00096895 58406 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.166 45.913 25487000 0 0 0 1158900 1248600 0 1463300 1888000 0 2411500 3890300 0 3005600 3362000 7058900 36342 2987 32513 302803;302804;302805;302806;302807;302808;302809;302810;302811 239621;239622 239621 2 MTEWETAAPAVAETPDIK Acetyl (Protein N-term);Oxidation (M) 2016.935 0.93502307 1512 P46782 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.8 3.06 2 13 1 1 1 1 1 1 1 1 1 1 2 1 1 1 84.408 84.871 2;3 1.5502E-38 95816 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 129.71 123.98 177240000 4920400 0 0 6679600 13930000 14256000 8868800 11970000 10920000 15487000 19656000 25858000 12546000 15671000 16481000 36343 1512 32514 302812;302813;302814;302815;302816;302817;302818;302819;302820;302821;302822;302823;302824;302825;302826 239623;239624;239625;239626;239627;239628;239629;239630;239631;239632;239633;239634 239634 2392 10 MTEWETAAPAVAETPDIK Acetyl (Protein N-term) 2000.9401 0.94010844 1512 P46782 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.25 2.49 1 11 1 1 1 1 1 1 1 1 1 1 1 1 90.533 91.071 2 5.8213E-21 90333 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 158.11 146.58 87832000 15471000 0 0 0 4593200 3685100 1873700 4580300 2552900 7150700 8168600 7705500 4311200 9266700 18474000 36344 1512 32514 302827;302828;302829;302830;302831;302832;302833;302834;302835;302836;302837;302838 239635;239636;239637;239638;239639;239640;239641;239642;239643;239644;239645;239646;239647 239641 13 MTFSEHPYNNLRK Unmodified 1635.7828 0.78276036 1118;5069 P21127;Q9UQ88 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A no no 0 0 1 By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 41.581 41.749 4 0.0042788 46401 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 36.847 32.299 65090000 0 0 0 1913700 1304500 4649500 2631500 5810100 4937000 4415700 6082900 8948900 10225000 0 14171000 36345 1118;5069 32515 302839;302840;302841;302842;302843;302844;302845;302846;302847;302848;302849 239648;239649;239650;239651;239652 239650 5 MTFTSNK Oxidation (M) 843.37965 0.37965365 120 O00154;Q6ZUV0 ACOT7;ACOT7L Cytosolic acyl coenzyme A thioester hydrolase;Putative cytosolic acyl coenzyme A thioester hydrolase-like yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 2 2 2 2 1 2 7.8753 7.9227 2 0.021911 6181 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 72.138 49.516 235150000 0 0 0 12389000 39458000 28535000 0 0 0 49185000 36707000 68873000 0 0 0 36346 120 32516 302850;302851;302852;302853;302854;302855;302856;302857;302858;302859;302860 239653;239654;239655;239656;239657 239655 4 MTFTSNK Unmodified 827.38474 0.38473903 120 O00154;Q6ZUV0 ACOT7;ACOT7L Cytosolic acyl coenzyme A thioester hydrolase;Putative cytosolic acyl coenzyme A thioester hydrolase-like yes no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 19.343 19.487 2 0.019328 19876 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 110.34 87.301 538500000 0 0 0 42247000 101440000 61866000 0 0 0 97932000 98890000 136130000 0 0 0 36347 120 32516 302861;302862;302863;302864;302865;302866 239658;239659;239660;239661 239661 3 MTGESECLNPSTQSR Oxidation (M) 1711.7141 0.71414803 4365 Q9H2G2 SLK STE20-like serine/threonine-protein kinase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 26.237 26.475 2 5.2925E-23 28090 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 119.76 110.33 34647000 0 0 0 0 1759000 4065800 2408800 2567200 1410200 4481500 3798200 4452400 2451700 2830200 4422300 36348 4365 32517 302867;302868;302869;302870;302871;302872;302873;302874;302875;302876;302877 239662;239663;239664;239665;239666;239667;239668;239669;239670;239671;239672 239667 5824 11 MTGESECLNPSTQSR Unmodified 1695.7192 0.71923341 4365 Q9H2G2 SLK STE20-like serine/threonine-protein kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.043 32.232 2 6.4023E-11 34733 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 116.01 109.48 67235000 0 0 0 4630300 3232900 6994300 4492700 0 2810200 6653400 5626700 8689600 4376900 5137100 14591000 36349 4365 32517 302878;302879;302880;302881;302882;302883;302884;302885;302886;302887;302888;302889 239673;239674;239675;239676;239677;239678;239679;239680;239681;239682;239683;239684 239682 12 MTGESECLNPSTQSRISK Unmodified 2023.9303 0.93028881 4365 Q9H2G2 SLK STE20-like serine/threonine-protein kinase yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 40.953 36.631 3 0.00014604 46008 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 72.819 68.785 38657000 0 30675000 7981500 0 0 0 0 0 0 0 0 0 0 0 0 36350 4365 32518 302890;302891 239685;239686;239687 239687 3 MTGFELTEGVK Oxidation (M) 1226.5853 0.58528933 2075 Q02413 DSG1 Desmoglein-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 59.146 59.291 2 0.00030031 67633 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 118.18 56.178 290170000 0 0 0 59423000 0 20808000 27800000 67050000 14186000 0 0 27739000 37849000 17096000 18219000 36351 2075 32519 302892;302893;302894;302895;302896;302897;302898;302899;302900 239688;239689;239690;239691;239692;239693;239694;239695;239696 239693 3372 5 MTGFELTEGVK Unmodified 1210.5904 0.59037471 2075 Q02413 DSG1 Desmoglein-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.471 68.55 2 0.00028854 77825 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 103.7 70.438 247930000 0 0 0 34767000 11170000 16633000 15790000 55436000 9852800 17021000 18869000 23749000 27193000 9400800 8050400 36352 2075 32519 302901;302902;302903;302904;302905;302906;302907;302908;302909;302910;302911;302912 239697;239698;239699;239700;239701;239702;239703;239704;239705;239706;239707;239708;239709;239710;239711;239712 239706 16 MTGLVDEAIDTK Unmodified 1291.633 0.63296781 1073 P18206 VCL Vinculin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.42 3.66 3 1 8 1 2 1 1 1 1 1 1 1 1 1 64.793 62.949 2 1.0704E-17 82731 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 154.24 107.85 2843900000 64476000 2622700000 15744000 14318000 4043500 21772000 0 0 0 10306000 19938000 12756000 0 11739000 46149000 36353 1073 32520 302913;302914;302915;302916;302917;302918;302919;302920;302921;302922;302923;302924 239713;239714;239715;239716;239717;239718;239719;239720;239721;239722;239723;239724 239719 12 MTGLVDEAIDTK Oxidation (M) 1307.6279 0.62788243 1073 P18206 VCL Vinculin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.54 3.71 1 2 1 9 1 2 1 1 1 1 1 1 1 1 1 1 61.807 60.636 2 2.7124E-14 67855 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.22 104.96 810380000 17841000 706330000 8939000 21183000 0 0 16523000 0 0 0 0 0 19724000 19836000 0 36354 1073 32520 302925;302926;302927;302928;302929;302930;302931;302932;302933;302934;302935;302936;302937 239725;239726;239727;239728;239729;239730;239731;239732;239733;239734;239735;239736;239737;239738;239739 239729 1538 15 MTGNAGEWCLMESDPGVFTELIK Acetyl (Protein N-term) 2626.1753 0.17534647 5235 Q9Y5K5 UCHL5 Ubiquitin carboxyl-terminal hydrolase isozyme L5 yes yes 1 0 0 By MS/MS 2 0 1 1 101.14 96.429 3 0.0006554 119204 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 45.735 42.273 24693000 0 24693000 0 0 0 0 0 0 0 0 0 0 0 0 0 36355 5235 32521 302938 239740 239740 1 MTGSLVSDR Oxidation (M) 980.45969 0.45969489 3697 Q92993 KAT5 Histone acetyltransferase KAT5 yes yes 0 1 0 By MS/MS 10 0 1 1 18.24 18.832 2 0.049877 18720 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 54.416 18.536 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36356 3697 32522 302939 239741 239741 5266 1 MTGSLVSDRSHDDIVTR Oxidation (M) 1903.9058 0.90578862 3697 Q92993 KAT5 Histone acetyltransferase KAT5 yes yes 0 1 1 By MS/MS 10 0 1 1 35.94 36.684 3 0.0011203 40007 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 44.045 29.123 8658500 0 0 0 0 0 0 0 0 0 0 0 8658500 0 0 0 36357 3697 32523 302940 239742 239742 5266 1 MTGSPTLVK Oxidation (M) 948.49502 0.49501776 3227 Q8IVH2 FOXP4 Forkhead box protein P4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 23.606 23.895 2 0.0034475 24932 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 79.474 48.245 54850000 0 0 0 0 0 5222600 0 5015300 4634200 5496600 6817100 10969000 10663000 6032500 0 36358 3227 32524 302941;302942;302943;302944;302945;302946;302947;302948 239743;239744;239745;239746 239746 4846 4 MTHSELMEK Oxidation (M) 1120.4893 0.48928046 2989 Q6W2J9 BCOR BCL-6 corepressor yes yes 0 1 0 By MS/MS 2 0 1 1 12.426 9.1319 2 0.032847 12484 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.107 37.185 5765900 0 5765900 0 0 0 0 0 0 0 0 0 0 0 0 0 36359 2989 32525 302949 239747 239747 4603;4604 1 MTHSELMEK 2 Oxidation (M) 1136.4842 0.48419508 2989 Q6W2J9 BCOR BCL-6 corepressor yes yes 0 2 0 By MS/MS 2 0 1 1 7.0248 4.7976 2 0.011216 6708 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 90.709 65.786 6213900 0 0 6213900 0 0 0 0 0 0 0 0 0 0 0 0 36360 2989 32525 302950 239748 239748 4603;4604 1 MTILQTYFR Unmodified 1171.606 0.6059652 483 O75348 ATP6V1G1 V-type proton ATPase subunit G 1 yes yes 0 0 0 By MS/MS 10 0 1 1 82.64 82.842 2 0.016297 95603 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.659 39.273 11655000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11655000 36361 483 32526 302951 239749 239749 1 MTISNMEADMNR Unmodified 1411.5894 0.58940521 3101 Q7Z4S6 KIF21A Kinesin-like protein KIF21A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 60.299 60.446 2 0.0022534 68280 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.624 59.284 13003000 0 0 0 0 1638900 0 0 0 0 0 4330500 0 0 0 7033900 36362 3101 32527 302952;302953;302954 239750 239750 1 MTISQQEFGR Oxidation (M) 1211.5605 0.56047157 1752 P55036 PSMD4 26S proteasome non-ATPase regulatory subunit 4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 35.781 35.964 2 0.0010373 39279 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 90.15 60.341 242970000 0 0 0 20407000 19085000 20773000 11407000 5792600 2417200 33289000 41909000 53905000 9384400 9292500 15312000 36363 1752 32528 302955;302956;302957;302958;302959;302960;302961;302962;302963;302964;302965;302966;302967;302968;302969;302970;302971;302972;302973;302974;302975;302976;302977;302978 239751;239752;239753;239754;239755;239756;239757;239758;239759;239760;239761;239762;239763;239764;239765;239766;239767;239768;239769 239753 2852 16 MTISQQEFGR Unmodified 1195.5656 0.56555694 1752 P55036 PSMD4 26S proteasome non-ATPase regulatory subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 49.004 48.639 2 1.9664E-23 54721 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 175.12 99.385 499620000 0 15998000 0 0 37066000 46188000 13260000 0 16575000 83558000 89171000 136670000 18542000 0 42590000 36364 1752 32528 302979;302980;302981;302982;302983;302984;302985;302986;302987;302988;302989;302990 239770;239771;239772;239773;239774;239775;239776;239777;239778 239771 9 MTLADDVTLDDLIMAK 2 Oxidation (M) 1795.8584 0.85835265 1875 P62191 PSMC1 26S protease regulatory subunit 4 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 2 1 2 1 88.632 88.715 2;3 3.0751E-28 103042 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 134.99 125.56 70928000 0 0 0 0 4088600 5008800 0 0 0 23770000 14225000 16602000 0 0 7234000 36365 1875 32529 302991;302992;302993;302994;302995;302996;302997;302998 239779;239780;239781;239782;239783;239784 239783 3035;3036 6 MTLDDFR Oxidation (M) 912.40112 0.40111738 1354 P35527;CON__P35527 KRT9 Keratin, type I cytoskeletal 9 yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 79 7 4 5 6 10 9 9 3 6 8 6 6 44.381 44.554 2 0.012219 45627 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 111.73 85.618 + 30515000000 0 0 0 3506900000 1933900000 1931700000 1503300000 7291500000 1578000000 2793300000 2107100000 2539800000 3163000000 1292600000 873850000 36366 1354 32530 302999;303000;303001;303002;303003;303004;303005;303006;303007;303008;303009;303010;303011;303012;303013;303014;303015;303016;303017;303018;303019;303020;303021;303022;303023;303024;303025;303026;303027;303028;303029;303030;303031;303032;303033;303034;303035;303036;303037;303038;303039;303040;303041;303042;303043;303044;303045;303046;303047;303048;303049;303050;303051;303052;303053;303054;303055;303056;303057;303058;303059;303060;303061;303062;303063;303064;303065;303066;303067;303068;303069;303070;303071;303072;303073;303074;303075;303076;303077 239785;239786;239787;239788;239789;239790;239791;239792;239793;239794;239795;239796;239797;239798;239799;239800;239801;239802;239803;239804;239805;239806;239807;239808;239809;239810;239811;239812;239813;239814;239815;239816;239817;239818;239819;239820;239821;239822;239823;239824;239825;239826;239827;239828;239829;239830;239831;239832;239833;239834;239835;239836;239837;239838;239839;239840;239841;239842;239843;239844;239845;239846;239847;239848;239849;239850;239851;239852;239853;239854;239855;239856;239857;239858;239859;239860;239861;239862;239863;239864;239865;239866;239867;239868;239869;239870;239871 239861 2059 85 MTLDDFR Unmodified 896.4062 0.40620276 1354 P35527;CON__P35527 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 27 2 2 2 2 4 2 2 2 2 3 2 2 58.019 58.144 1;2 2.2792E-57 65926 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 203.49 123.11 + 42808000000 0 0 0 4158500000 2514400000 2802700000 1459500000 11375000000 1789000000 3919400000 3413400000 3756700000 4084700000 1700700000 1834400000 36367 1354 32530 303078;303079;303080;303081;303082;303083;303084;303085;303086;303087;303088;303089;303090;303091;303092;303093;303094;303095;303096;303097;303098;303099;303100;303101;303102;303103;303104 239872;239873;239874;239875;239876;239877;239878;239879;239880;239881;239882;239883;239884;239885;239886;239887;239888;239889;239890;239891;239892;239893;239894;239895;239896;239897;239898;239899;239900;239901;239902;239903;239904;239905;239906;239907;239908 239876 35 MTLDDFRIK Oxidation (M) 1153.5801 0.58014438 1354 P35527;CON__P35527 KRT9 Keratin, type I cytoskeletal 9 yes no 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 34 2 2 3 3 3 3 3 3 3 3 3 3 54.977 55.152 2;3 1.3579E-05 64109 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 164.53 61.82 + 2590000000 0 0 0 229130000 93164000 178880000 266800000 430510000 221520000 217750000 182800000 221260000 197640000 207150000 143410000 36368 1354 32531 303105;303106;303107;303108;303109;303110;303111;303112;303113;303114;303115;303116;303117;303118;303119;303120;303121;303122;303123;303124;303125;303126;303127;303128;303129;303130;303131;303132;303133;303134;303135;303136;303137;303138 239909;239910;239911;239912;239913;239914;239915;239916;239917;239918;239919;239920;239921;239922;239923;239924;239925;239926;239927;239928;239929;239930;239931;239932;239933;239934;239935;239936;239937;239938;239939 239937 2059 15 MTLDDFRIK Unmodified 1137.5852 0.58522975 1354 P35527;CON__P35527 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 71.137 71.329 3 0.0057752 81701 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 72.879 36.432 + 191420000 0 0 0 0 0 8234000 3480900 19522000 11872000 7391600 9806200 101790000 13220000 6384100 9723900 36369 1354 32531 303139;303140;303141;303142;303143;303144;303145;303146;303147;303148 239940;239941;239942;239943 239943 4 MTLDQQHIETPGQNIPTK Oxidation (M) 2066.0103 0.010253695 2649 Q2KHR3 QSER1 Glutamine and serine-rich protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.12 3.26 1 1 6 2 1 1 1 1 1 1 51.495 49.97 3 2.4507E-05 61358 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 77.506 67.757 89747000 0 35352000 0 7017700 7238000 0 0 0 9172000 0 0 0 9947800 0 21020000 36370 2649 32532 303149;303150;303151;303152;303153;303154;303155;303156 239944;239945;239946 239945 4314 3 MTLDQQHIETPGQNIPTK Unmodified 2050.0153 0.015339073 2649 Q2KHR3 QSER1 Glutamine and serine-rich protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 63.391 58.576 3 0.00017311 75130 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.203 52.797 61127000 0 58184000 2942800 0 0 0 0 0 0 0 0 0 0 0 0 36371 2649 32532 303157;303158;303159 239947;239948 239947 2 MTLDTLSIYETPSMGLLDK 2 Oxidation (M) 2159.0378 0.037773579 1776 P55884 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 0 2 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 85.487 85.613 2 2.3426E-50 98934 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 139.89 123.54 17928000 0 0 0 0 0 0 0 0 0 5888000 0 0 0 3370900 8669200 36372 1776 32533 303160;303161;303162 239949;239950;239951 239950 2899;2900 3 MTLGTPPTLPNFNALSVPPAGAK Oxidation (M) 2309.209 0.2089535 2932 Q6P3W7 SCYL2 SCY1-like protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 89.441 89.529 3 4.112E-05 103801 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.041 38.85 20189000 0 0 0 0 2360300 0 1381100 0 2143300 4298500 0 0 1890800 1698000 6417000 36373 2932 32534 303163;303164;303165;303166;303167;303168;303169 239952 239952 4562 1 MTLIPSPNSPFQK Unmodified 1458.7541 0.754086 3745 Q96AY4 TTC28 Tetratricopeptide repeat protein 28 yes yes 0 0 0 By MS/MS 2 0 1 1 84.601 76.47 2 0.0038243 99831 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.349 60.13 9533900 9533900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36374 3745 32535 303170 239953 239953 1 MTLISPIILK Oxidation (M) 1143.6937 0.69371757 609 O94953 KDM4B Lysine-specific demethylase 4B yes yes 0 1 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 82.771 82.918 2 0.0057464 95545 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.35 45.193 15663000 0 0 0 0 0 2254300 1737700 1739200 0 2460200 2474500 0 0 0 4997000 36375 609 32536 303171;303172;303173;303174;303175;303176;303177 239954;239955;239956;239957 239955 751 4 MTLISPIILK Unmodified 1127.6988 0.69880295 609 O94953 KDM4B Lysine-specific demethylase 4B yes yes 0 0 0 By MS/MS 10 0 1 1 88.151 88.301 2 0.0093306 102160 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.96 57.96 3794700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3794700 36376 609 32536 303178 239958 239958 1 MTLNDTLAK Unmodified 1005.5165 0.51648149 4264 Q9BZF9 UACA Uveal autoantigen with coiled-coil domains and ankyrin repeats yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 47.467 46.802 2 0.01448 52783 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 58.23 28.155 70149000 0 27303000 3038600 0 2522700 0 3855100 4261300 0 5051000 4996800 6714400 4920700 2839500 4645500 36377 4264 32537 303179;303180;303181;303182;303183;303184;303185;303186;303187;303188;303189 239959;239960 239960 2 MTLNVGGETENNGVSK Unmodified 1648.7726 0.77264919 2492 Q15058 KIF14 Kinesin-like protein KIF14 yes yes 0 0 0 By MS/MS 2 0 1 1 53.106 47.313 2 3.4673E-16 61358 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.7 101.45 11347000 0 11347000 0 0 0 0 0 0 0 0 0 0 0 0 0 36378 2492 32538 303190 239961 239961 1 MTLSLADR Unmodified 905.46405 0.46405199 3560 Q8WVC0 LEO1 RNA polymerase-associated protein LEO1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 52.766 52.984 2 0.0044044 58767 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.81 53.917 369540000 0 0 0 10099000 0 0 9959500 11740000 18917000 40152000 42843000 50742000 45252000 34695000 105140000 36379 3560 32539 303191;303192;303193;303194;303195;303196;303197;303198;303199;303200;303201 239962;239963;239964;239965;239966;239967;239968;239969;239970;239971 239965 10 MTLSLADR Oxidation (M) 921.45897 0.45896661 3560 Q8WVC0 LEO1 RNA polymerase-associated protein LEO1 yes yes 0 1 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 1 2 2 2 1 2 1 2 36.986 37.315 2 0.0078703 40251 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.761 28.84 114840000 0 0 0 0 0 4645700 5000700 3976900 8623000 12852000 20092000 10349000 21817000 7472400 20016000 36380 3560 32539 303202;303203;303204;303205;303206;303207;303208;303209;303210;303211;303212;303213;303214;303215;303216 239972;239973;239974;239975;239976;239977 239973 5050 6 MTLSLADRCSK Oxidation (M) 1296.6166 0.61660624 3560 Q8WVC0 LEO1 RNA polymerase-associated protein LEO1 yes yes 0 1 1 By MS/MS 2 0 1 1 35.354 29.007 2 0.012708 40737 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.331 57.309 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36381 3560 32540 303217 239978 239978 5050 1 MTLSNPSELDELMSEEAYEK Oxidation (M) 2331.0134 0.013409322 1157 P23434 GCSH Glycine cleavage system H protein, mitochondrial yes yes 0 1 0 By MS/MS 2.67 0.471 1 2 3 85.199 81.411 2 7.7116E-139 103433 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 211.75 191.09 54755000 0 54755000 0 0 0 0 0 0 0 0 0 0 0 0 0 36382 1157 32541 303218;303219;303220 239979;239980;239981 239979 1673;1674 3 MTLSNPSELDELMSEEAYEK Unmodified 2315.0185 0.0184947 1157 P23434 GCSH Glycine cleavage system H protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 91.12 85.703 2;3 8.2272E-119 107759 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 193.96 184.68 138720000 10582000 128140000 0 0 0 0 0 0 0 0 0 0 0 0 0 36383 1157 32541 303221;303222;303223 239982;239983;239984 239982 3 MTLSNPSELDELMSEEAYEK 2 Oxidation (M) 2347.0083 0.0083239439 1157 P23434 GCSH Glycine cleavage system H protein, mitochondrial yes yes 0 2 0 By MS/MS 3 0 1 1 76.819 73.34 2 0.0010307 88128 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 49.929 49.929 4877900 0 4877900 0 0 0 0 0 0 0 0 0 0 0 0 0 36384 1157 32541 303224 239985 239985 1673;1674 1 MTLVASEDYGDTLAAIQGLLK Oxidation (M) 2224.1297 0.12970013 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 1 0 By MS/MS 2 0 1 1 99.806 95.093 3 9.1033E-05 117577 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.564 51.159 6462600 0 6462600 0 0 0 0 0 0 0 0 0 0 0 0 0 36385 2344 32542 303225 239986 239986 3812 1 MTLVEEGFNPAVIK Oxidation (M) 1562.8014 0.80143012 233 O14975 SLC27A2 Very long-chain acyl-CoA synthetase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 78.325 78.35 2 4.0367E-13 90313 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 109.42 89.115 95564000 0 0 0 4009600 6832800 15251000 8739200 6743400 10332000 11732000 0 11714000 7471100 12738000 0 36386 233 32543 303226;303227;303228;303229;303230;303231;303232;303233;303234;303235 239987;239988;239989;239990;239991;239992;239993;239994;239995;239996;239997;239998 239990 310 12 MTLVEEGFNPAVIK Unmodified 1546.8065 0.8065155 233 O14975 SLC27A2 Very long-chain acyl-CoA synthetase yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 82.935 82.977 2 3.3953E-05 96089 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 85.355 59.733 33820000 0 0 0 962570 2200200 3232800 2208600 3516100 2760900 4726200 0 5474300 0 0 8738700 36387 233 32543 303236;303237;303238;303239;303240;303241;303242;303243;303244;303245 239999;240000;240001;240002;240003;240004;240005;240006;240007 240007 7 MTMYADEVESQLK Unmodified 1543.6898 0.68983076 2699 Q53F19 C17orf85 Uncharacterized protein C17orf85 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 75.434 71.128 2 0.03233 89091 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 55.401 45.169 29515000 0 29515000 0 0 0 0 0 0 0 0 0 0 0 0 0 36388 2699 32544 303246;303247 240008 240008 0 MTNGFSGADLTEICQR Oxidation (M) 1814.7927 0.7927327 1755 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 1 0 By MS/MS By MS/MS By matching 7.33 3.77 1 2 1 1 1 71.598 70.161 2 1.1241E-07 80864 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 86.803 72.384 41480000 0 32171000 0 0 0 0 0 0 0 0 0 5197200 0 0 4111800 36389 1755 32545 303248;303249;303250 240009;240010 240010 2871 2 MTNGFSGADLTEICQR Unmodified 1798.7978 0.79781808 1755 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 0 0 By MS/MS By matching By MS/MS 7.33 3.77 1 2 1 1 1 75.153 73.759 2 2.7371E-31 91316 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.32 120.71 67114000 0 56733000 0 0 0 0 0 0 0 0 0 4409300 0 0 5972000 36390 1755 32545 303251;303252;303253 240011;240012 240011 2 MTNGFSGADLTEICQRACK Unmodified 2157.9605 0.96054309 1755 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 76.619 71.347 3 1.0889E-51 91607 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 134.93 130.49 47555000 15894000 26905000 4755600 0 0 0 0 0 0 0 0 0 0 0 0 36391 1755 32546 303254;303255;303256 240013;240014;240015;240016 240014 4 MTNGFSGADLTEICQRACK Oxidation (M) 2173.9555 0.95545771 1755 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 1 1 By MS/MS 2 0 1 1 72.041 68.759 3 0.00075477 84401 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 50.787 41.968 6837600 0 0 6837600 0 0 0 0 0 0 0 0 0 0 0 0 36392 1755 32546 303257 240017 240017 2871 1 MTNHCVFSANEDHETIR Oxidation (M) 2075.8789 0.87892195 5280 Q9Y6E2 BZW2 Basic leucine zipper and W2 domain-containing protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 35.647 35.891 3 5.8514E-05 38182 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.449 63.481 74585000 0 0 0 4402600 0 10306000 0 0 4874000 7561800 0 15996000 11838000 10194000 9413200 36393 5280 32547 303258;303259;303260;303261;303262;303263;303264;303265 240018;240019;240020;240021;240022;240023;240024;240025 240020 6689 7 MTNHCVFSANEDHETIR Unmodified 2059.884 0.88400732 5280 Q9Y6E2 BZW2 Basic leucine zipper and W2 domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 1 2 1 2 1 2 2 2 2 2 2 39.357 39.611 3;4 0.00020423 43945 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 62.589 60.832 288750000 0 0 0 8318100 9845100 33430000 8468300 15982000 9734300 28102000 30682000 33589000 27355000 26820000 56427000 36394 5280 32547 303266;303267;303268;303269;303270;303271;303272;303273;303274;303275;303276;303277;303278;303279;303280;303281;303282;303283;303284;303285 240026;240027;240028;240029;240030;240031;240032;240033;240034;240035 240027 9 MTNPAIQNDFSYYR Oxidation (M) 1734.7672 0.76716988 4654 Q9NUQ9 FAM49B Protein FAM49B yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 66.818 67.047 2 1.2482E-14 76237 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 117.23 102.36 24392000 0 0 0 0 0 2674200 0 0 0 4700000 0 4100800 2252500 4121500 6542900 36395 4654 32548 303286;303287;303288;303289;303290;303291;303292 240036;240037;240038;240039;240040 240038 6066 5 MTNPAIQNDFSYYRR Oxidation (M) 1890.8683 0.86828091 4654 Q9NUQ9 FAM49B Protein FAM49B yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 58.693 58.953 3 0.00017135 66950 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 62.377 50.609 75669000 0 0 0 0 0 10748000 7121500 0 0 8340800 0 9038200 8588000 8487300 23345000 36396 4654 32549 303293;303294;303295;303296;303297;303298;303299 240041;240042;240043;240044;240045;240046;240047 240041 6066 7 MTNQYGILFK Acetyl (Protein N-term);Oxidation (M) 1271.622 0.62200919 4304 Q9GZS3 WDR61 WD repeat-containing protein 61;WD repeat-containing protein 61, N-terminally processed yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 82.195 82.252 2 0.001002 94328 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 61.999 52.606 29804000 0 0 0 2135800 0 0 2633100 0 0 3016600 4547500 7323500 3869800 6278000 0 36397 4304 32550 303300;303301;303302;303303;303304;303305;303306 240048;240049;240050;240051;240052 240050 5765 5 MTNQYGILFK Acetyl (Protein N-term) 1255.6271 0.62709457 4304 Q9GZS3 WDR61 WD repeat-containing protein 61;WD repeat-containing protein 61, N-terminally processed yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 88.744 88.835 2 0.00056185 107840 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.13 92.325 19321000 0 0 0 0 882170 842340 0 1108000 0 1775900 1883800 1757900 1362500 2433400 7275300 36398 4304 32550 303307;303308;303309;303310;303311;303312;303313;303314;303315;303316 240053;240054 240053 2 MTNTGLPGPATPAYSYAK Unmodified 1838.8873 0.88728501 4812 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 67.757 66.543 2 0.00056574 75918 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.171 52.034 42616000 0 28542000 0 0 0 0 0 0 0 0 0 0 3261200 3165800 7646700 36399 4812 32551 303317;303318;303319;303320 240055;240056 240056 2 MTNTGLPGPATPAYSYAK Oxidation (M) 1854.8822 0.88219964 4812 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein yes yes 0 1 0 By MS/MS By MS/MS 6 4 1 1 1 1 65.17 62.298 2 2.271E-13 78786 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.866 77.734 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36400 4812 32551 303321;303322 240057;240058 240057 6176 2 MTNYDVEHTIK Oxidation (M) 1365.6235 0.62346575 857 P08133 ANXA6 Annexin A6 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 4 1 2 1 37.914 32.944 2;3 0.015673 43095 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 43.502 37.316 75079000 4221200 67172000 3685800 0 0 0 0 0 0 0 0 0 0 0 0 36401 857 32552 303323;303324;303325;303326 240059;240060 240059 1081 2 MTNYDVEHTIK Unmodified 1349.6286 0.62855113 857 P08133 ANXA6 Annexin A6 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 44.191 39.179 3 0.017767 50790 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 33.207 17.244 50883000 0 50883000 0 0 0 0 0 0 0 0 0 0 0 0 0 36402 857 32552 303327;303328 240061;240062 240061 2 MTPEDLTAIGVTK Oxidation (M) 1390.7014 0.70138172 3588;3587 Q8WXE0;Q8WXD9 CASKIN2;CASKIN1 Caskin-2;Caskin-1 no no 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 63.392 63.526 2 0.0088801 72596 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 41.399 19.936 3457900 0 0 0 0 0 0 3457900 0 0 0 0 0 0 0 0 36403 3588;3587 32553 303329;303330 240063;240064 240064 5087 2 MTPEDYEK Unmodified 1011.4219 0.4219124 4501 Q9HBL8 NMRAL1 NmrA-like family domain-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 27.642 23.336 2 0.01948 30833 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.833 68.985 46947000 0 46947000 0 0 0 0 0 0 0 0 0 0 0 0 0 36404 4501 32554 303331 240065;240066 240066 2 MTPEQLAIK Unmodified 1029.5529 0.55286699 161 O00487 PSMD14 26S proteasome non-ATPase regulatory subunit 14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 54.822 53.4 2 0.003114 61451 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 124.08 91.724 2825800000 30547000 1877200000 16005000 51134000 74830000 80742000 30613000 32796000 21553000 149430000 148160000 183560000 0 38678000 90572000 36405 161 32555 303332;303333;303334;303335;303336;303337;303338;303339;303340;303341;303342;303343;303344;303345;303346;303347 240067;240068;240069;240070;240071;240072;240073;240074;240075;240076;240077;240078;240079;240080;240081;240082;240083;240084;240085;240086;240087 240086 20 MTPEQLAIK Oxidation (M) 1045.5478 0.54778161 161 O00487 PSMD14 26S proteasome non-ATPase regulatory subunit 14 yes yes 0 1 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 46.538 40.581 2 0.00046486 52902 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.69 95.516 228120000 10069000 218050000 0 0 0 0 0 0 0 0 0 0 0 0 0 36406 161 32555 303348;303349;303350 240088;240089;240090;240091 240088 224 4 MTPFPATSAAPEPHPSTSTAQPVTPKPTSQATR Oxidation (M) 3404.6671 0.66706849 2427 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 0 1 1 By MS/MS By MS/MS 10 0 2 1 1 57.236 57.371 4 3.2483E-25 65371 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 53.266 47.606 16394000 0 0 0 0 0 0 10628000 5765600 0 0 0 0 0 0 0 36407 2427 32556 303351;303352 240092;240093 240093 3984 2 MTPSYEIRAVGNK Unmodified 1464.7395 0.73949856 2152 Q08211 DHX9 ATP-dependent RNA helicase A yes yes 0 0 1 By MS/MS By matching 2 0 2 1 1 51.484 45.495 3 0.0034071 62388 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.781 49.731 153070000 149450000 0 3624600 0 0 0 0 0 0 0 0 0 0 0 0 36408 2152 32557 303353;303354 240094 240094 1 MTQNDSQLQPIQYQYQDNIK Oxidation (M) 2470.1435 0.14345271 632 O95239 KIF4A Chromosome-associated kinesin KIF4A yes yes 0 1 0 By MS/MS By matching By matching By MS/MS 10 0 4 1 1 1 1 67.585 67.729 3 1.9415E-05 77743 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.566 43.252 31068000 0 0 0 0 0 8975000 0 5371100 0 8023200 8699100 0 0 0 0 36409 632 32558 303355;303356;303357;303358 240095;240096 240095 774 2 MTQNDSQLQPIQYQYQDNIK Unmodified 2454.1485 0.14853809 632 O95239 KIF4A Chromosome-associated kinesin KIF4A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 69.834 70.027 3 0.0024251 80531 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 36.111 32.005 37287000 0 0 0 0 0 4954800 3389300 3997400 0 7502400 6984400 0 0 3812000 6646700 36410 632 32558 303359;303360;303361;303362;303363;303364;303365 240097;240098;240099;240100 240099 4 MTQNPNYYNLQGISHR Oxidation (M) 1950.9006 0.90064367 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 53.575 53.747 3 3.9232E-21 60931 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 113.69 104.68 201860000 0 0 0 17408000 0 21232000 29698000 9538300 14147000 17307000 0 30606000 41505000 0 20416000 36411 528 32559 303366;303367;303368;303369;303370;303371;303372;303373;303374 240101;240102;240103;240104;240105;240106;240107 240103 690 7 MTQNPNYYNLQGISHR Unmodified 1934.9057 0.90572904 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 57.308 57.5 3 0.00073813 65190 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 39.338 35.236 251830000 0 0 0 0 7538300 18033000 10903000 15638000 12504000 16932000 22442000 32495000 19773000 27553000 68020000 36412 528 32559 303375;303376;303377;303378;303379;303380;303381;303382;303383;303384;303385 240108;240109;240110;240111;240112;240113;240114;240115;240116;240117;240118 240115 11 MTRGQLQDELEK Unmodified 1446.7137 0.71367774 3217 Q8IUD2 ERC1 ELKS/Rab6-interacting/CAST family member 1 yes yes 0 0 1 By MS/MS 2 0 1 1 48.035 42.472 3 0.047835 55362 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 49.483 33.54 35650000 0 35650000 0 0 0 0 0 0 0 0 0 0 0 0 0 36413 3217 32560 303386 240119 240119 0 MTSEVIEDEK Acetyl (Protein N-term);Oxidation (M) 1237.5384 0.53839872 4180 Q9BV86 NTMT1 N-terminal Xaa-Pro-Lys N-methyltransferase 1;N-terminal Xaa-Pro-Lys N-methyltransferase 1, N-terminally processed yes yes 1 1 0 By MS/MS 1 0 1 1 97.643 102.91 2 0.0035428 81764 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 75.294 66.381 3887100 3887100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36414 4180 32561 303387 240120 240120 5667 1 MTSFAEQK Unmodified 940.43242 0.43241751 2164 Q08AD1 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 21.711 21.943 2 0.025413 23133 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 58.716 30.187 30917000 0 0 0 0 0 6819500 0 0 3338100 5830000 0 0 0 0 14929000 36415 2164 32562 303388;303389;303390;303391 240121;240122 240121 2 MTSFAEQK Oxidation (M) 956.42733 0.42733213 2164 Q08AD1 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 yes yes 0 1 0 By MS/MS 2 0 1 1 15.278 11.937 2 0.01818 15883 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.212 57.895 18736000 0 18736000 0 0 0 0 0 0 0 0 0 0 0 0 0 36416 2164 32562 303392 240123 240123 3478 1 MTSGDVLSNRK Unmodified 1206.6027 0.60267073 4719 Q9NX62 IMPAD1 Inositol monophosphatase 3 yes yes 0 0 1 By MS/MS By matching By MS/MS 2 0 5 2 1 2 26.954 22.701 2;3 0.030001 32478 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.915 31.709 116770000 64021000 17313000 35434000 0 0 0 0 0 0 0 0 0 0 0 0 36417 4719 32563 303393;303394;303395;303396;303397 240124;240125 240124 0 MTSGVSQGEWK Unmodified 1208.5496 0.54957253 5055 Q9UPQ9 TNRC6B Trinucleotide repeat-containing gene 6B protein yes yes 0 0 0 By MS/MS 2 0 1 1 38.946 33.934 2 0.029063 44376 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.102 43.965 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36418 5055 32564 303398 240126 240126 1 MTSPLEK Unmodified 804.40514 0.40514012 1154 P23368 ME2 NAD-dependent malic enzyme, mitochondrial yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 26.347 26.507 2 0.024937 28075 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 81.784 26.343 239370000 0 0 0 0 1332700 22455000 25746000 27068000 24013000 34539000 53358000 50864000 0 0 0 36419 1154 32565 303399;303400;303401;303402;303403;303404;303405;303406 240127;240128;240129;240130 240129 4 MTSQEAACFPDIISGPQQTQK Oxidation (M) 2352.0726 0.072595956 397 O60341 KDM1A Lysine-specific histone demethylase 1A yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 2 2 2 2 1 2 1 2 2 2 1 76.445 76.506 2;3 2.3744E-21 88372 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 94.234 90.947 212320000 0 0 0 2006600 18355000 17047000 19825000 20497000 13978000 22378000 5828500 22551000 24811000 20735000 24307000 36420 397 32566 303407;303408;303409;303410;303411;303412;303413;303414;303415;303416;303417;303418;303419;303420;303421;303422;303423;303424;303425;303426 240131;240132;240133;240134;240135;240136;240137;240138;240139;240140;240141;240142;240143;240144 240143 500 14 MTSQEAACFPDIISGPQQTQK Unmodified 2336.0777 0.077681334 397 O60341 KDM1A Lysine-specific histone demethylase 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 2 1 2 2 2 2 2 2 2 2 1 78.393 78.468 2;3 7.9406E-10 90573 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 76.492 73.484 185210000 0 0 0 5533300 11048000 9362700 9129100 21215000 9586300 20627000 16248000 17552000 16134000 21499000 27274000 36421 397 32566 303427;303428;303429;303430;303431;303432;303433;303434;303435;303436;303437;303438;303439;303440;303441;303442;303443;303444;303445;303446;303447 240145;240146;240147;240148;240149;240150;240151;240152;240153;240154;240155;240156;240157;240158;240159;240160 240146 16 MTSTPETLLEEIEAK Oxidation (M) 1706.8284 0.82843273 4267 Q9BZI7 UPF3B Regulator of nonsense transcripts 3B yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 89.42 88.307 2 1.4204E-41 110059 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 150.68 116.15 88135000 0 75206000 822370 0 0 0 1932700 1715000 0 5019600 3439000 0 0 0 0 36422 4267 32567 303448;303449;303450;303451;303452;303453;303454;303455 240161;240162;240163;240164;240165 240163 5727 5 MTSTPETLLEEIEAK Unmodified 1690.8335 0.83351811 4267 Q9BZI7 UPF3B Regulator of nonsense transcripts 3B yes yes 0 0 0 By MS/MS 2 0 1 1 95.581 90.717 2 3.4247E-41 112379 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 147.71 139.12 67818000 0 67818000 0 0 0 0 0 0 0 0 0 0 0 0 0 36423 4267 32567 303456 240166 240166 1 MTSTTPPGEDIK Oxidation (M) 1291.5966 0.5965823 4433 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 2 1 1 1 25.702 25.972 2 0.0039281 27602 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 52.579 22.324 54350000 0 0 0 0 0 5434600 4781300 6148900 0 5532200 8353300 0 9065700 8561900 6471900 36424 4433 32568 303457;303458;303459;303460;303461;303462;303463;303464;303465 240167;240168;240169;240170 240170 5881 4 MTSTTPPGEDIK Unmodified 1275.6017 0.60166768 4433 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 yes yes 0 0 0 By MS/MS 10 0 1 1 31.698 32.033 2 0.041614 35000 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 47.559 26.689 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36425 4433 32568 303466 240171 240171 1 MTTEEQQQR Unmodified 1149.5084 0.508436 3213 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.5897 6.714 2 1.6066E-50 4438 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 194.27 176.89 80823000 0 0 0 5090100 8114700 9701400 8489000 9953200 8159300 4025800 7307600 3150900 5271300 3957000 7602400 36426 3213 32569 303467;303468;303469;303470;303471;303472;303473;303474;303475;303476;303477;303478 240172;240173;240174;240175;240176;240177;240178;240179;240180;240181;240182;240183 240176 12 MTTETASEDDNFGTAQSNK Oxidation (M) 2061.8433 0.84330753 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.293 29.485 2 4.1198E-245 30911 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 234.69 229.37 102110000 0 0 0 7922200 5007300 7754800 6588700 8823400 5177000 9172600 9731300 12917000 8390500 10822000 9807900 36427 3641 32570 303479;303480;303481;303482;303483;303484;303485;303486;303487;303488;303489;303490 240184;240185;240186;240187;240188;240189;240190;240191;240192;240193;240194;240195;240196;240197 240188 5155 14 MTTETASEDDNFGTAQSNK Unmodified 2045.8484 0.8483929 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.68 1.57 1 24 1 2 2 2 2 2 2 2 2 2 2 2 2 36.284 36.193 2;3 1.6841E-124 38950 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 192.18 189.14 295040000 4770000 0 0 12298000 15528000 30331000 14751000 24985000 15816000 24291000 27558000 28047000 27325000 33911000 35426000 36428 3641 32570 303491;303492;303493;303494;303495;303496;303497;303498;303499;303500;303501;303502;303503;303504;303505;303506;303507;303508;303509;303510;303511;303512;303513;303514;303515 240198;240199;240200;240201;240202;240203;240204;240205;240206;240207;240208;240209;240210;240211;240212;240213;240214;240215 240201 17 MTTQSPLNQSSMNAMGSLSVLSPDR 3 Oxidation (M) 2699.2201 0.22006483 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 3 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 73.589 73.735 3 7.0312E-19 85053 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 72.302 66.075 65649000 0 0 0 0 0 10717000 0 5089500 0 12897000 12390000 14693000 9862700 0 0 36429 3641 32571 303516;303517;303518;303519;303520;303521 240216;240217;240218;240219;240220;240221 240218 5156;5157;5158 6 MTTTSSVEGK Oxidation (M) 1055.4805 0.48048991 722 P00374;Q86XF0 DHFR;DHFRL1 Dihydrofolate reductase;Dihydrofolate reductase, mitochondrial yes no 0 1 0 By matching By matching By MS/MS 10 0 3 1 1 1 6.8782 7.0614 2 0.0050863 4497 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.78 48.791 4328800 0 0 0 0 0 0 1089300 0 0 698680 0 0 0 0 2540800 36430 722 32572 303522;303523;303524 240222 240222 871 1 MTTTSSVEGK Unmodified 1039.4856 0.48557529 722 P00374;Q86XF0 DHFR;DHFRL1 Dihydrofolate reductase;Dihydrofolate reductase, mitochondrial yes no 0 0 0 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 12.215 12.383 2 0.014809 10599 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.473 39.781 8926600 0 0 0 0 808810 0 973840 0 0 0 2085400 0 0 0 5058500 36431 722 32572 303525;303526;303527;303528 240223;240224 240223 2 MTVCLETEK Oxidation (M) 1125.5046 0.50459617 1708 P53004 BLVRA Biliverdin reductase A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 6.2 3.82 3 2 5 1 4 1 1 1 1 1 31.604 29.308 2 0.001312 37391 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 135.83 110.91 152840000 7696100 132160000 0 0 0 0 1410700 0 0 1363800 2989100 0 0 3377000 3846300 36432 1708 32573 303529;303530;303531;303532;303533;303534;303535;303536;303537;303538 240225;240226;240227;240228;240229 240225 2759 5 MTVCLETEK Unmodified 1109.5097 0.50968155 1708 P53004 BLVRA Biliverdin reductase A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 6.25 3.77 1 1 2 2 1 1 46.248 43.812 2 0.0034247 48235 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 105.81 85.288 568530000 0 541580000 0 0 0 7717300 0 0 0 0 0 0 0 0 19236000 36433 1708 32573 303539;303540;303541;303542 240230;240231 240231 2 MTVDESGQLISCSMDDTVR Oxidation (M) 2158.9181 0.91806915 453 O75083 WDR1 WD repeat-containing protein 1 yes yes 0 1 0 By matching By MS/MS 10 0 2 1 1 70.499 70.85 2 1.1206E-08 80925 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.047 77.563 6817500 0 0 0 0 0 0 0 0 0 0 2106200 0 0 0 4711300 36434 453 32574 303543;303544 240232 240232 574 1 MTVDFEECLK Unmodified 1270.5574 0.55736002 2491 Q15057 ACAP2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 78.049 73.274 2 0.0045802 91335 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.81 58.974 49927000 0 49927000 0 0 0 0 0 0 0 0 0 0 0 0 0 36435 2491 32575 303545 240233 240233 1 MTVNSLIR Unmodified 932.51134 0.51133653 3017 Q6ZUT9 DENND5B DENN domain-containing protein 5B yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 58.491 58.494 2 0.018722 66356 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 64.207 32.252 41180000 0 0 0 3660600 3408600 3708700 3735000 5129500 4245700 4706300 6009300 0 0 6576200 0 36436 3017 32576 303546;303547;303548;303549;303550;303551;303552;303553;303554 240234;240235 240234 2 MTVTDQVNCPK Oxidation (M) 1307.585 0.58497176 795 P05090 APOD Apolipoprotein D yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 2 2 1 1 1 24.065 24.031 2 6.532E-13 25574 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 141.48 124.25 25248000 0 0 0 15968000 3837100 0 0 0 1035000 2169500 2239000 0 0 0 0 36437 795 32577 303555;303556;303557;303558;303559;303560;303561 240236;240237;240238;240239;240240 240239 961 4 MTVTDQVNCPK Unmodified 1291.5901 0.59005713 795 P05090 APOD Apolipoprotein D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 34.485 34.597 2 2.6838E-05 38028 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 120.15 103.95 74126000 0 0 0 24730000 5293600 0 2897200 5819500 3387500 11521000 0 10382000 5188900 4907500 0 36438 795 32577 303562;303563;303564;303565;303566;303567;303568;303569;303570 240241;240242;240243;240244;240245;240246;240247;240248;240249 240244 9 MTVTMHGNIK Oxidation (M) 1146.5525 0.55254942 5351 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.3 2.1 1 9 1 1 1 1 1 1 2 2 35.509 35.227 2 0.0050266 37827 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.999 17.552 + 64317000 0 5695000 0 5383900 5095300 0 6470400 5663600 0 0 6217900 0 0 12956000 16835000 36439 5351 32578 303571;303572;303573;303574;303575;303576;303577;303578;303579;303580 240250;240251;240252 240250 6738 3 MVAAANEIAK Unmodified 1016.5325 0.5324659 3238 Q8IWC1 MAP7D3 MAP7 domain-containing protein 3 yes yes 0 0 0 By MS/MS 10 0 1 1 34.529 34.584 2 0.045692 38275 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 38.276 4.6335 9272400 0 0 0 0 0 0 9272400 0 0 0 0 0 0 0 0 36440 3238 32579 303581 240253 240253 1 MVAAATNNLCEAANAAVQGHASQEK Oxidation (M) 2571.1806 0.18058328 5187 Q9Y490 TLN1 Talin-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 2 1 1 2 1 61.868 62.155 3 8.2059E-76 70331 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 122.3 111.05 62865000 0 0 0 0 0 6577700 0 0 0 7132600 11886000 13429000 7187200 5145300 11507000 36441 5187 32580 303582;303583;303584;303585;303586;303587;303588;303589;303590;303591 240254;240255;240256;240257;240258;240259;240260;240261;240262;240263 240257 6565 10 MVAAATNNLCEAANAAVQGHASQEK Unmodified 2555.1857 0.18566865 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 66.583 66.95 3 1.2088E-18 75971 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.945 40.077 17691000 0 0 0 0 0 0 0 0 0 0 0 0 0 4233600 13457000 36442 5187 32580 303592;303593;303594 240264;240265;240266;240267 240264 4 MVAADNQDTSNLPQLAVPAPR Unmodified 2207.1005 0.10046569 3250 Q8IWZ3 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 10 0 16 1 2 1 2 2 1 1 1 1 2 1 1 78.465 78.516 2;3 1.8917E-05 89919 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 71.607 66.43 71965000 0 0 0 3757400 5998800 5559400 4497400 11898000 3700700 4185400 4862600 6057800 10103000 4084900 7259700 36443 3250 32581 303595;303596;303597;303598;303599;303600;303601;303602;303603;303604;303605;303606;303607;303608;303609;303610 240268;240269;240270;240271;240272;240273 240272 6 MVAADNQDTSNLPQLAVPAPR Oxidation (M) 2223.0954 0.095380308 3250 Q8IWZ3 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 yes yes 0 1 0 By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching 10 0 13 1 2 1 1 1 1 1 2 2 1 76.473 76.489 2;3 2.9148E-06 88561 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 62.924 57.747 93993000 0 0 0 3278200 15594000 3469400 3497000 0 0 3711400 5356000 8084400 20600000 24475000 5928300 36444 3250 32581 303611;303612;303613;303614;303615;303616;303617;303618;303619;303620;303621;303622;303623 240274;240275 240275 4861 2 MVAFNNQIDHEVTVEK Unmodified 1872.904 0.90399771 4641 Q9NU22 MDN1 Midasin yes yes 0 0 0 By MS/MS 2 0 1 1 68.973 65.293 3 0.04001 80731 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 16.529 9.1209 2315000 0 0 2315000 0 0 0 0 0 0 0 0 0 0 0 0 36445 4641 32582 303624 240276 240276 1 MVAPPAEPTR Unmodified 1067.5434 0.54336494 3142 Q86U70;O43679 LDB1;LDB2 LIM domain-binding protein 1;LIM domain-binding protein 2 yes no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 35.681 35.939 2 0.011861 39620 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 53.493 29.295 56793000 0 0 0 2678100 0 3110700 0 3751200 3889500 5668300 6541300 6078500 3492100 7358600 14225000 36446 3142 32583 303625;303626;303627;303628;303629;303630;303631;303632;303633;303634 240277;240278;240279;240280;240281;240282;240283;240284 240277 8 MVATSGVK Oxidation (M) 807.41604 0.41603916 5241 Q9Y5N6 ORC6 Origin recognition complex subunit 6 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 7.4059 7.5272 2 0.01658 5664 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 58.917 15.794 28432000 0 0 0 0 2927500 3356100 3709700 3192100 2634200 4509000 0 0 0 4332400 3770900 36447 5241 32584 303635;303636;303637;303638;303639;303640;303641;303642 240285;240286;240287 240286 6641 3 MVAYLQDSALDDERLASK Oxidation (M) 2039.9834 0.98337024 2994 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.42 1.93 1 11 1 1 1 1 1 1 1 1 1 1 1 1 67.545 67.236 3 4.6373E-38 76257 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 129.32 123.67 193290000 0 3762700 0 8672100 11094000 14501000 0 12271000 18605000 23028000 18143000 26690000 18673000 17133000 20719000 36448 2994 32585 303643;303644;303645;303646;303647;303648;303649;303650;303651;303652;303653;303654 240288;240289;240290;240291;240292;240293;240294;240295;240296;240297 240294 4610 10 MVAYLQDSALDDERLASK Unmodified 2023.9885 0.98845562 2994 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 72.958 73.077 3 2.4476E-26 83568 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 106.94 97.662 114900000 0 0 0 0 3526700 14063000 0 7728300 10819000 14829000 12999000 14764000 7567200 9577700 19028000 36449 2994 32585 303655;303656;303657;303658;303659;303660;303661;303662;303663;303664 240298;240299;240300;240301;240302;240303;240304;240305;240306;240307 240300 10 MVDFAGVK Unmodified 865.43677 0.4367746 1131 P21964 COMT Catechol O-methyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.646 52.789 2 0.025549 59460 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 58.604 48.179 116530000 0 0 0 6303700 5738100 7672800 5701600 8534400 3737000 9193400 11178000 19048000 8351000 9841000 21234000 36450 1131 32586 303665;303666;303667;303668;303669;303670;303671;303672;303673;303674;303675;303676 240308;240309;240310;240311 240310 4 MVDFAGVK Oxidation (M) 881.43169 0.43168922 1131 P21964 COMT Catechol O-methyltransferase yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 41.387 41.704 2 0.02948 46547 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 48.787 28.905 30759000 0 0 0 0 0 0 3326300 4313100 0 2995300 5079100 6273600 5343600 3427600 0 36451 1131 32586 303677;303678;303679;303680;303681;303682;303683 240312;240313 240313 2 MVDMPANNK Unmodified 1018.4576 0.4575864 3980 Q96S19 C16orf13 UPF0585 protein C16orf13 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 24.87 25.547 2 0.014092 26846 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 58.815 28.203 7484200 0 0 0 0 0 0 0 0 0 0 0 4385900 0 0 3098300 36452 3980 32587 303684;303685 240314 240314 1 MVDQLFCK Oxidation (M) 1055.478 0.47798749 1977 P78347 GTF2I General transcription factor II-I yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 47.356 47.065 2 0.011892 52699 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 64.757 47.793 308330000 0 136340000 0 10231000 11010000 17808000 9203200 9579800 9177100 18617000 15734000 18352000 24104000 12486000 15685000 36453 1977 32588 303686;303687;303688;303689;303690;303691;303692;303693;303694;303695;303696;303697;303698 240315;240316;240317;240318;240319;240320;240321;240322;240323 240316 3187 9 MVDQLFCK Unmodified 1039.4831 0.48307287 1977 P78347 GTF2I General transcription factor II-I yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.57 3.96 3 4 1 1 1 1 1 1 1 59.748 57.186 2 0.0025411 73688 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.68 102.82 274740000 7444000 157300000 2901200 13978000 20292000 0 0 0 0 0 0 29613000 0 0 43213000 36454 1977 32588 303699;303700;303701;303702;303703;303704;303705 240324;240325;240326;240327;240328;240329;240330;240331;240332 240325 9 MVDREQLVQK Acetyl (Protein N-term);Oxidation (M) 1302.6602 0.66018561 1869 P61981 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes yes 1 1 1 By MS/MS 2.5 0.5 1 1 2 40.25 35.391 2 0.0044998 43912 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 60.973 31.886 61887000 0 61887000 0 0 0 0 0 0 0 0 0 0 0 0 0 36455 1869 32589 303706;303707 240333;240334 240334 3027 2 MVDREQLVQK Acetyl (Protein N-term) 1286.6653 0.66527099 1869 P61981 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes yes 1 0 1 By MS/MS 2.5 0.5 1 1 2 53.61 48.263 2 0.0046135 62340 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.614 43.405 66061000 0 66061000 0 0 0 0 0 0 0 0 0 0 0 0 0 36456 1869 32589 303708;303709 240335 240335 1 MVDREQLVQK Unmodified 1244.6547 0.6547063 1869 P61981 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS 7.33 3.77 5 10 2 2 1 1 1 1 1 1 1 1 1 1 1 28.286 26.781 2;3 0.0082092 38432 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 142.43 95.36 880440000 401290000 168780000 157280000 4267800 4144500 14311000 4918700 4812800 5048900 11714000 24742000 26694000 0 0 52436000 36457 1869 32589 303710;303711;303712;303713;303714;303715;303716;303717;303718;303719;303720;303721;303722;303723;303724 240336;240337;240338;240339 240338 2 MVDREQLVQK Oxidation (M) 1260.6496 0.64962092 1869 P61981 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2 0 9 3 3 3 23.923 19.899 2;3 0.009642 25337 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 63.216 35.887 597720000 168120000 124060000 305540000 0 0 0 0 0 0 0 0 0 0 0 0 36458 1869 32589 303725;303726;303727;303728;303729;303730;303731;303732;303733 240340;240341;240342 240341 3027 2 MVEADRPGK Acetyl (Protein N-term) 1043.507 0.50697943 1395 P38159;Q96E39;O75526 RBMX;RBMXL1;RBMXL2 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1;RNA-binding motif protein, X-linked-like-2 yes no 1 0 1 By MS/MS 2.5 0.5 1 1 2 32.114 27.626 2 0.015212 36270 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.812 55.654 34084000 0 34084000 0 0 0 0 0 0 0 0 0 0 0 0 0 36459 1395 32590 303734;303735 240343;240344 240344 2 MVEADRPGK Acetyl (Protein N-term);Oxidation (M) 1059.5019 0.50189405 1395 P38159;Q96E39;O75526 RBMX;RBMXL1;RBMXL2 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1;RNA-binding motif protein, X-linked-like-2 yes no 1 1 1 By MS/MS 2.5 0.5 1 1 2 19.346 15.719 2 0.025749 20477 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 50.04 27.909 11483000 0 11483000 0 0 0 0 0 0 0 0 0 0 0 0 0 36460 1395 32590 303736;303737 240345;240346 240345 0 MVEDELALFDK Acetyl (Protein N-term);Oxidation (M) 1366.6326 0.63263346 4502 Q9HBM1 SPC25 Kinetochore protein Spc25 yes yes 1 1 0 By MS/MS By MS/MS By matching By MS/MS 4.33 4.03 2 2 2 1 3 1 1 96.741 96.163 2 0.00072065 91396 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 85.958 77.11 90819000 14882000 73605000 0 0 0 832850 0 0 0 0 0 0 0 0 1499200 36461 4502 32591 303738;303739;303740;303741;303742;303743 240347;240348;240349;240350;240351 240350 5936 4 MVEDELALFDK Acetyl (Protein N-term) 1350.6377 0.63771883 4502 Q9HBM1 SPC25 Kinetochore protein Spc25 yes yes 1 0 0 By MS/MS 2 0 1 1 98.105 93.331 2 1.8887E-06 115484 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 137.98 117.65 132450000 0 132450000 0 0 0 0 0 0 0 0 0 0 0 0 0 36462 4502 32591 303744 240352 240352 1 MVEEVFSNAIDCLSDEDK Oxidation (M) 2115.8977 0.89765128 1451 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS 3.67 2.87 3 2 1 1 3 1 1 87.269 82.902 2;3 2.0748E-81 103676 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 192.14 185.96 121270000 14171000 103040000 4058400 0 0 0 0 0 0 0 0 0 0 0 0 36463 1451 32592 303745;303746;303747;303748;303749;303750 240353;240354;240355;240356;240357 240353 2287 5 MVEEVFSNAIDCLSDEDK Unmodified 2099.9027 0.90273666 1451 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 90.365 85.691 2 1.4656E-276 107398 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 267.23 254.88 121030000 18609000 99643000 2780100 0 0 0 0 0 0 0 0 0 0 0 0 36464 1451 32592 303751;303752;303753;303754 240358;240359;240360;240361;240362;240363 240359 6 MVEGFFDR Unmodified 999.4484 0.44840192 721 P00367;P49448 GLUD1;GLUD2 Glutamate dehydrogenase 1, mitochondrial;Glutamate dehydrogenase 2, mitochondrial yes no 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 64.485 64.645 2 0.027721 73986 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 57.177 51.947 6908700 0 0 0 0 0 0 2037500 2659300 2211900 0 0 0 0 0 0 36465 721 32593 303755;303756;303757 240364 240364 1 MVEGFFDRGASIVEDK Oxidation (M) 1814.8509 0.85089951 721 P00367;P49448 GLUD1;GLUD2 Glutamate dehydrogenase 1, mitochondrial;Glutamate dehydrogenase 2, mitochondrial yes no 0 1 1 By MS/MS 2 0 1 1 80.723 72.593 3 0.0025054 95151 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.66 47.746 26232000 26232000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36466 721 32594 303758 240365 240365 868 1 MVEGFFDRGASIVEDK Unmodified 1798.856 0.85598488 721 P00367;P49448 GLUD1;GLUD2 Glutamate dehydrogenase 1, mitochondrial;Glutamate dehydrogenase 2, mitochondrial yes no 0 0 1 By MS/MS 2 0 1 1 83.678 75.547 3 0.016735 98848 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.52 5.9374 18514000 18514000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36467 721 32594 303759 240366 240366 0 MVEGYQGLR Unmodified 1051.5121 0.51206481 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 41.474 41.484 2 0.028187 46175 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 49.097 26.054 30221000 0 0 0 5176200 3634600 0 0 3138700 3448100 3801600 0 0 5696000 5325800 0 36468 2501 32595 303760;303761;303762;303763;303764;303765;303766 240367;240368;240369 240368 3 MVEIGSR Oxidation (M) 806.39564 0.39563807 1053 P17480 UBTF Nucleolar transcription factor 1 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 17.359 17.678 2 0.047048 16385 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 50.307 8.8044 31473000 0 0 0 0 0 0 0 0 2988400 0 0 18149000 5853300 4482000 0 36469 1053 32596 303767;303768;303769;303770 240370 240370 1 MVEPENAVTITPLRPEDDYSPR Oxidation (M) 2544.2166 0.21661766 2381 Q14160 SCRIB Protein scribble homolog yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 74.817 74.92 3 2.2211E-44 86322 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 111.18 104.19 112790000 0 0 0 0 7130500 10341000 8304000 9466500 6356200 19183000 0 15770000 8951100 11046000 16245000 36470 2381 32597 303771;303772;303773;303774;303775;303776;303777;303778;303779;303780 240371;240372;240373;240374;240375;240376;240377;240378;240379 240375 3878 9 MVEPENAVTITPLRPEDDYSPR Unmodified 2528.2217 0.22170303 2381 Q14160 SCRIB Protein scribble homolog yes yes 0 0 1 By MS/MS 10 0 1 1 77.277 77.542 3 6.06E-16 89128 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.987 70.699 10746000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10746000 36471 2381 32597 303781 240380 240380 1 MVEPQYQELK Unmodified 1263.6169 0.61692381 172 O00625 PIR Pirin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.42 3.66 3 1 8 1 2 1 1 1 1 1 1 1 1 1 51.345 49.303 2 0.00012499 63781 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.35 117.57 1211900000 28956000 993820000 8535200 0 0 10344000 0 0 0 10951000 21415000 27883000 0 20393000 89606000 36472 172 32598 303782;303783;303784;303785;303786;303787;303788;303789;303790;303791;303792;303793 240381;240382;240383;240384;240385;240386;240387;240388;240389;240390;240391;240392;240393;240394;240395 240385 14 MVEPQYQELK Oxidation (M) 1279.6118 0.61183843 172 O00625 PIR Pirin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 2 1 1 1 1 1 1 1 1 1 1 1 42.588 40.877 2 0.0031856 45921 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 71.379 39.059 459790000 16443000 368880000 4657200 0 3684500 8135100 7119600 4420300 0 6344300 15657000 14198000 0 10246000 0 36473 172 32598 303794;303795;303796;303797;303798;303799;303800;303801;303802;303803;303804;303805;303806 240396;240397;240398;240399;240400;240401;240402;240403;240404;240405;240406;240407 240396 243 12 MVESASETIR Acetyl (Protein N-term) 1163.5492 0.54923818 3227 Q8IVH2 FOXP4 Forkhead box protein P4 yes yes 1 0 0 By MS/MS By MS/MS 10 0 2 1 1 61.381 61.651 2 0.0034701 70461 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 55.461 30.518 5894300 0 0 0 0 0 0 0 2356900 0 0 3537400 0 0 0 0 36474 3227 32599 303807;303808 240408 240408 1 MVETLSNLLR Oxidation (M) 1190.6329 0.63290823 1081 P18858 LIG1 DNA ligase 1 yes yes 0 1 0 By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 76.479 76.569 2 0.023402 88426 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 41.448 32.503 47406000 0 0 0 0 2359300 5620100 4019000 4577100 3408600 6107200 5159700 8792700 3479700 3882900 0 36475 1081 32600 303809;303810;303811;303812;303813;303814;303815;303816;303817;303818 240409;240410 240409 2 MVETLSNLLR Unmodified 1174.638 0.63799361 1081 P18858 LIG1 DNA ligase 1 yes yes 0 0 0 By MS/MS 10 0 1 1 80.906 81.122 2 0.022683 93518 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.476 74.439 6136700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6136700 36476 1081 32600 303819 240411 240411 0 MVEVVAFR Unmodified 949.50552 0.50552287 5057 Q9UPS6 SETD1B Histone-lysine N-methyltransferase SETD1B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 66.553 66.765 2 0.015415 76554 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 68.915 47.144 32391000 0 0 0 0 0 3626000 2667300 0 3902100 3406400 0 5651200 2941800 4690500 5505500 36477 5057 32601 303820;303821;303822;303823;303824;303825;303826;303827 240412;240413;240414;240415;240416;240417;240418 240413 7 MVEVVAFR Oxidation (M) 965.50044 0.50043749 5057 Q9UPS6 SETD1B Histone-lysine N-methyltransferase SETD1B yes yes 0 1 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 55.772 56.009 2 0.016831 62976 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 58.604 42.972 16222000 0 0 0 0 0 1847400 0 2149100 2140900 0 0 4270900 3571800 2241600 0 36478 5057 32601 303828;303829;303830;303831;303832;303833 240419;240420 240420 6409 2 MVGDVTGAQAYASTAK Oxidation (M) 1584.7454 0.7453718 2058 Q01628;P13164;Q01629 IFITM3;IFITM1;IFITM2 Interferon-induced transmembrane protein 3;Interferon-induced transmembrane protein 1;Interferon-induced transmembrane protein 2 yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.64 2.9 1 1 9 2 1 1 1 1 1 1 1 1 1 43.679 43.013 2 1.0924E-23 47635 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 121.04 95.824 177650000 0 50232000 0 0 0 7973500 9335900 10678000 9489300 0 14996000 30650000 18582000 12681000 13033000 36479 2058 32602 303834;303835;303836;303837;303838;303839;303840;303841;303842;303843;303844 240421;240422;240423;240424;240425;240426;240427;240428;240429;240430;240431;240432 240424 3347 12 MVGDVTGAQAYASTAK Unmodified 1568.7505 0.75045718 2058 Q01628;P13164;Q01629 IFITM3;IFITM1;IFITM2 Interferon-induced transmembrane protein 3;Interferon-induced transmembrane protein 1;Interferon-induced transmembrane protein 2 yes no 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS 7.91 3.42 2 1 8 1 2 1 1 1 1 1 1 1 1 50.754 49.215 2 1.1705E-27 55257 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 134.08 108.06 469590000 4239900 245200000 0 0 0 22010000 29680000 18314000 17389000 24627000 0 0 24138000 36780000 47216000 36480 2058 32602 303845;303846;303847;303848;303849;303850;303851;303852;303853;303854;303855 240433;240434;240435;240436;240437;240438;240439 240439 6 MVGFIIGR Oxidation (M) 907.49496 0.49495818 3873 Q96I24 FUBP3 Far upstream element-binding protein 3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.192 65.28 2 0.0048937 74178 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 89.673 76.625 106720000 0 0 0 6030500 6428700 6622900 10354000 6405000 8413700 9169000 9407500 12122000 10635000 8133700 13000000 36481 3873 32603 303856;303857;303858;303859;303860;303861;303862;303863;303864;303865;303866;303867 240440;240441;240442;240443;240444;240445;240446;240447;240448;240449 240449 5383 10 MVGFIIGR Unmodified 891.50004 0.50004356 3873 Q96I24 FUBP3 Far upstream element-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 74.935 75.066 2 0.015683 85836 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.485 60.661 40713000 0 0 0 0 0 6725400 0 0 0 9776400 0 0 7720900 0 16491000 36482 3873 32603 303868;303869;303870;303871 240450;240451;240452;240453 240452 4 MVGGVLVER Oxidation (M) 974.5219 0.52190122 4910 Q9UHV9 PFDN2 Prefoldin subunit 2 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 2 2 2 40.252 40.762 2 0.014983 45402 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 51.346 33.788 103550000 0 0 0 0 0 0 3875100 0 0 0 12138000 37304000 0 13475000 36760000 36483 4910 32604 303872;303873;303874;303875;303876;303877;303878;303879 240454;240455 240455 6265 2 MVGGVLVER Unmodified 958.52699 0.52698659 4910 Q9UHV9 PFDN2 Prefoldin subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 50.882 51.047 2 0.011336 57443 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 62.969 43.609 90993000 0 0 0 7359000 0 0 0 0 0 0 22464000 0 0 0 61170000 36484 4910 32604 303880;303881;303882 240456 240456 1 MVGLDIDSR Oxidation (M) 1020.491 0.49099502 3047 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 2 2 1 2 1 2 2 2 2 2 1 1 47.701 47.837 2 0.0034716 54182 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 78.334 47.722 181790000 0 0 0 11557000 15551000 6731500 13694000 5132300 10909000 22280000 21905000 32498000 20659000 6315000 14560000 36485 3047 32605 303883;303884;303885;303886;303887;303888;303889;303890;303891;303892;303893;303894;303895;303896;303897;303898;303899;303900;303901;303902 240457;240458;240459;240460;240461;240462;240463;240464;240465;240466;240467;240468;240469;240470;240471;240472 240459 4673 12 MVGLDIDSR Unmodified 1004.4961 0.4960804 3047 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 58.495 58.667 2 0.011336 65688 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.969 29.156 108820000 0 0 0 4118500 0 8415100 6101900 7304300 5201800 11131000 10587000 14302000 12450000 10866000 18339000 36486 3047 32605 303903;303904;303905;303906;303907;303908;303909;303910;303911;303912;303913 240473;240474;240475;240476;240477;240478 240474 6 MVGTTSVVK Oxidation (M) 936.49502 0.49501776 2656 Q2TAL8 QRICH1 Glutamine-rich protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 20.967 21.151 2 0.0092835 22031 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 58.815 40.967 38201000 0 0 0 0 2828800 4535700 5634500 0 3866600 5839500 0 8818700 0 0 6677000 36487 2656 32606 303914;303915;303916;303917;303918;303919;303920 240479;240480 240480 4328 2 MVGTTSVVK Unmodified 920.5001 0.50010314 2656 Q2TAL8 QRICH1 Glutamine-rich protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.403 29.596 2 0.01435 31473 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 58.426 35.535 189280000 0 0 0 9609400 7748700 11005000 9735000 11114000 9502000 17264000 17341000 15595000 16693000 16944000 46732000 36488 2656 32606 303921;303922;303923;303924;303925;303926;303927;303928;303929;303930;303931;303932 240481 240481 1 MVHGNITPENIILNK Unmodified 1691.9029 0.9028755 2932 Q6P3W7 SCYL2 SCY1-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 72.456 72.093 3 0.0011341 81847 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 50.102 45.211 122380000 0 18080000 0 5977400 3617100 0 5700000 15400000 7060500 0 10694000 12047000 8238800 11795000 23767000 36489 2932 32607 303933;303934;303935;303936;303937;303938;303939;303940;303941;303942;303943 240482;240483;240484;240485;240486;240487 240486 4 MVHGNITPENIILNK Oxidation (M) 1707.8978 0.89779012 2932 Q6P3W7 SCYL2 SCY1-like protein 2 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 6.8 3.92 2 3 1 1 1 1 1 70.936 68.494 3 0.0016061 77609 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 41.967 29.99 138970000 36062000 29448000 0 0 0 0 0 31257000 21212000 0 0 0 0 0 20989000 36490 2932 32607 303944;303945;303946;303947;303948 240488;240489;240490 240489 4563 2 MVHIDEEMGPK Unmodified 1284.5842 0.58424348 4371 Q9H2P0 ADNP Activity-dependent neuroprotector homeobox protein yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 49.815 44.991 3 0.0035463 56250 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 53.237 46.578 19424000 0 14991000 4433300 0 0 0 0 0 0 0 0 0 0 0 0 36491 4371 32608 303949;303950 240491;240492 240492 2 MVIDIVLATDMSK 2 Oxidation (M) 1466.7361 0.73605267 2159 Q08499 PDE4D cAMP-specific 3',5'-cyclic phosphodiesterase 4D yes yes 0 2 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 81.449 78.323 2 0.0061663 95227 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 68.657 52.433 2464200 737640 0 1726600 0 0 0 0 0 0 0 0 0 0 0 0 36492 2159 32609 303951;303952 240493;240494 240494 3471;3472 1 MVIENELEDPAIMR 2 Oxidation (M) 1690.7906 0.79060744 3133 Q86TB9 PATL1 Protein PAT1 homolog 1 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 2 1 1 1 1 2 1 1 1 2 1 2 66.191 66.265 2;3 1.1739E-19 75816 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 134.57 127.87 300700000 0 0 0 25989000 20008000 20310000 25021000 19473000 35200000 19385000 20885000 35018000 37709000 15919000 25788000 36493 3133 32610 303953;303954;303955;303956;303957;303958;303959;303960;303961;303962;303963;303964;303965;303966;303967;303968 240495;240496;240497;240498;240499;240500;240501;240502;240503;240504;240505;240506;240507;240508 240500 4753;4754 12 MVIENELEDPAIMR Unmodified 1658.8008 0.80077819 3133 Q86TB9 PATL1 Protein PAT1 homolog 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.823 80.883 2 3.5452E-22 93176 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 173.71 160.75 75265000 0 0 0 955560 3354500 4760200 2989100 7474100 5445200 7664200 6782300 7698200 2908400 6142100 19091000 36494 3133 32610 303969;303970;303971;303972;303973;303974;303975;303976;303977;303978;303979;303980 240509;240510;240511;240512;240513;240514;240515;240516;240517;240518;240519 240512 11 MVIENELEDPAIMR Oxidation (M) 1674.7957 0.79569281 3133 Q86TB9 PATL1 Protein PAT1 homolog 1 yes yes 0 1 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 17 1 2 1 2 2 1 2 2 1 1 2 75.359 75.441 2 0.00024239 87733 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 74.944 66.244 154480000 0 0 0 2207200 8025900 6524800 11912000 16798000 0 13013000 18159000 30185000 8646500 6630000 32379000 36495 3133 32610 303981;303982;303983;303984;303985;303986;303987;303988;303989;303990;303991;303992;303993;303994;303995;303996;303997 240520;240521;240522;240523;240524;240525;240526;240527;240528;240529;240530 240520 4753;4754 9 MVIITGPPEAQFK Oxidation (M) 1445.7588 0.75883702 153;4768;5290 O00425;Q9NZI8;Q9Y6M1 IGF2BP3;IGF2BP1;IGF2BP2 Insulin-like growth factor 2 mRNA-binding protein 3;Insulin-like growth factor 2 mRNA-binding protein 1;Insulin-like growth factor 2 mRNA-binding protein 2 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 1 1 1 2 2 1 1 1 1 2 71.646 71.733 2 0.00037884 82270 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 77.379 59.943 55762000 0 0 0 2833000 3568300 4637700 3200200 0 3011600 8970700 3338400 5528000 4095600 4006800 12571000 36496 153;4768;5290 32611 303998;303999;304000;304001;304002;304003;304004;304005;304006;304007;304008;304009;304010;304011;304012 240531;240532;240533;240534;240535;240536;240537;240538;240539;240540;240541;240542;240543;240544;240545;240546 240543 211 13 MVIITGPPEAQFK Unmodified 1429.7639 0.7639224 153;4768;5290 O00425;Q9NZI8;Q9Y6M1 IGF2BP3;IGF2BP1;IGF2BP2 Insulin-like growth factor 2 mRNA-binding protein 3;Insulin-like growth factor 2 mRNA-binding protein 1;Insulin-like growth factor 2 mRNA-binding protein 2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.287 78.347 2 3.3116E-07 90640 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 101.97 86.384 143130000 0 0 0 4270100 7459700 11391000 6121300 9159600 6952400 11007000 12204000 15830000 11713000 18803000 28221000 36497 153;4768;5290 32611 304013;304014;304015;304016;304017;304018;304019;304020;304021;304022;304023;304024 240547;240548;240549;240550;240551;240552;240553;240554;240555;240556;240557 240555 10 MVINHLEK Oxidation (M) 998.5219 0.52190122 1641 P50990 CCT8 T-complex protein 1 subunit theta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 19.774 18.68 2 0.0021859 24665 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 122.18 53.691 1074100000 18259000 287920000 408790000 21399000 18420000 39551000 26819000 19128000 15806000 35227000 34510000 45311000 26730000 26463000 49786000 36498 1641 32612 304025;304026;304027;304028;304029;304030;304031;304032;304033;304034;304035;304036;304037;304038;304039;304040;304041 240558;240559;240560;240561;240562;240563;240564;240565;240566;240567;240568;240569;240570;240571;240572;240573;240574;240575;240576;240577;240578 240573 2638 20 MVINHLEK Unmodified 982.52699 0.52698659 1641 P50990 CCT8 T-complex protein 1 subunit theta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.57 3.96 3 4 1 1 1 1 1 1 1 32.559 30.526 2 0.002392 42110 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.22 51.605 3446100000 2424800000 428010000 430720000 0 0 41180000 32409000 0 0 50891000 0 0 38107000 0 0 36499 1641 32612 304042;304043;304044;304045;304046;304047;304048 240579;240580;240581;240582;240583;240584;240585;240586;240587;240588;240589 240582 10 MVIPGGIDVHTR Oxidation (M) 1309.6813 0.6812554 2613 Q16555 DPYSL2 Dihydropyrimidinase-related protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 52.133 52.284 3 0.00071321 58232 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 62.924 54.792 90554000 0 0 0 5425100 4448800 6636200 0 0 0 0 12566000 17824000 5957900 12042000 25654000 36500 2613 32613 304049;304050;304051;304052;304053;304054;304055;304056 240590;240591;240592;240593;240594;240595;240596;240597 240595 4268 7 MVIPGGIDVHTR Unmodified 1293.6863 0.68634078 2613 Q16555 DPYSL2 Dihydropyrimidinase-related protein 2 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 65.107 65.249 3 0.015488 74002 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 43.991 35.037 97105000 0 0 0 2671700 0 3699000 3595000 3340300 2041100 6054100 13502000 10421000 3194100 10932000 37655000 36501 2613 32613 304057;304058;304059;304060;304061;304062;304063;304064;304065;304066;304067 240598;240599 240599 0 MVIQGPSSPQGEAMVTDVLEDQK Unmodified 2458.172 0.17197565 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 88.832 84.791 3 9.0182E-05 105401 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.024 53.736 24998000 0 24998000 0 0 0 0 0 0 0 0 0 0 0 0 0 36502 2203 32614 304068;304069 240600 240600 1 MVLCSQQWK Oxidation (M) 1194.5525 0.55254942 1053 P17480 UBTF Nucleolar transcription factor 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 40.903 41.146 2 0.0024602 45295 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 101.33 77.899 39860000 0 0 0 0 3640200 3364100 2743300 0 2741900 0 6136000 17488000 0 0 3746600 36503 1053 32615 304070;304071;304072;304073;304074;304075;304076;304077 240601;240602;240603;240604;240605;240606 240604 1475 6 MVLCSQQWK Unmodified 1178.5576 0.55763479 1053 P17480 UBTF Nucleolar transcription factor 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 52.783 53.003 2 0.0052558 59955 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 78.77 58.629 189870000 0 0 0 0 9426900 12680000 6336900 8744400 11436000 0 22596000 55046000 21815000 16895000 24892000 36504 1053 32615 304078;304079;304080;304081;304082;304083;304084;304085;304086;304087 240607;240608;240609;240610 240609 4 MVLDHLVIQR Unmodified 1222.6856 0.6856125 199 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 no no 0 0 0 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 70.243 70.476 3 0.047608 80308 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.541 23.948 13409000 0 0 0 0 0 2193700 0 0 0 0 0 3518400 1373600 0 6323000 36505 199 32616 304088;304089;304090;304091 240611 240611 1 MVLHIQDK Unmodified 982.52699 0.52698659 13 A2RUC4 TYW5 tRNA wybutosine-synthesizing protein 5 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching By matching By matching 10 0 7 1 1 1 1 1 1 1 29.546 29.7 2 0.022922 32569 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 60.76 10.633 313300000 0 0 0 25462000 21242000 0 0 27886000 23123000 0 62683000 116210000 0 36698000 0 36506 13 32617 304092;304093;304094;304095;304096;304097;304098 240612 240612 1 MVLNETYR Oxidation (M) 1040.4961 0.4960804 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 30.671 30.909 2 0.0036936 33118 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 117.16 92.957 122640000 0 0 0 0 6789500 11107000 9224400 7998700 8752600 13223000 11823000 16643000 11297000 11625000 14155000 36507 19 32618 304099;304100;304101;304102;304103;304104;304105;304106;304107;304108;304109 240613;240614;240615;240616;240617;240618;240619;240620;240621;240622;240623;240624;240625;240626;240627 240625 20 15 MVLNETYR Unmodified 1024.5012 0.50116577 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 15 2 2 2 1 1 2 1 1 1 1 1 42.001 42.162 2 0.0094921 46572 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 82.716 62.157 193420000 0 0 0 0 13549000 15880000 14223000 15418000 9541200 20366000 20567000 18815000 18329000 20991000 25742000 36508 19 32618 304110;304111;304112;304113;304114;304115;304116;304117;304118;304119;304120;304121;304122;304123;304124 240628;240629;240630;240631;240632;240633 240632 6 MVLNETYRNIK Unmodified 1379.7231 0.72312022 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 0 1 By MS/MS 2 0 2 2 57.368 49.187 2;3 0.0014424 67114 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.649 72.949 47261000 47261000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36509 19 32619 304125;304126 240634;240635 240634 1 MVLQLSK Unmodified 817.47316 0.47316011 3635 Q92600 RQCD1 Cell differentiation protein RCD1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 52.482 50.395 2 0.035514 68460 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.244 14.811 42601000 14268000 0 0 0 5794900 0 0 13705000 0 0 0 0 0 8833000 0 36510 3635 32620 304127;304128;304129;304130 240636;240637;240638 240636 3 MVLSNMEK Oxidation (M) 966.45144 0.45143839 1244 P29218 IMPA1 Inositol monophosphatase 1 yes yes 0 1 0 By MS/MS 10 0 1 1 20.295 20.933 2 0.043532 20702 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.124 13.785 4968100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4968100 36511 1244 32621 304131 240639 240639 1 MVLVGDVK Oxidation (M) 875.47864 0.47863942 1818;957 P60891;P11908 PRPS1;PRPS2 Ribose-phosphate pyrophosphokinase 1;Ribose-phosphate pyrophosphokinase 2 no no 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 2 2 36.228 36.482 2 0.010927 40966 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 67.032 14.349 136690000 0 0 0 8589300 7687100 0 14517000 9574500 0 13621000 13017000 17674000 21244000 0 30767000 36512 1818;957 32622 304132;304133;304134;304135;304136;304137;304138;304139;304140;304141;304142 240640;240641;240642;240643 240642 1239 4 MVLVGDVK Unmodified 859.48372 0.48372479 1818;957 P60891;P11908 PRPS1;PRPS2 Ribose-phosphate pyrophosphokinase 1;Ribose-phosphate pyrophosphokinase 2 no no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 51.821 52.052 2 0.035078 58977 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 52.716 1.7502 349620000 0 0 0 15556000 0 0 16495000 0 12827000 49934000 58924000 53223000 32085000 0 110570000 36513 1818;957 32622 304143;304144;304145;304146;304147;304148;304149;304150 240644;240645 240645 2 MVMESGDWLVGGDLQVLEK Unmodified 2105.0173 0.017312908 642 O95340 PAPSS2 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes yes 0 0 0 By MS/MS 2 0 1 1 97.332 89.202 3 0.015002 115195 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 29.603 24.393 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36514 642 32623 304151 240646 240646 1 MVMETIEK Oxidation (M) 995.46675 0.4667541 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.16 2.46 2 17 1 1 1 1 2 1 2 2 1 2 1 1 1 2 28.529 28.15 2 0.0071469 31096 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 78.324 53.692 498380000 7746100 223610000 0 6808600 14688000 28272000 18504000 28755000 20582000 12596000 34984000 18713000 18435000 17715000 46963000 36515 516 32624 304152;304153;304154;304155;304156;304157;304158;304159;304160;304161;304162;304163;304164;304165;304166;304167;304168;304169;304170 240647;240648;240649;240650;240651;240652;240653;240654;240655;240656;240657;240658;240659;240660 240656 671;672 14 MVMETIEK Unmodified 979.47184 0.47183948 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.393 41.571 2 0.0082674 45970 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 86.794 56.609 376070000 0 0 0 13113000 18061000 25714000 20364000 26134000 18005000 34559000 32803000 43084000 30371000 35760000 78102000 36516 516 32624 304171;304172;304173;304174;304175;304176;304177;304178;304179;304180;304181;304182 240661;240662;240663;240664;240665;240666;240667;240668;240669 240665 9 MVMETIEK 2 Oxidation (M) 1011.4617 0.46166872 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 20.053 16.897 2 0.013264 17866 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 89.296 62.334 43351000 0 41453000 1897800 0 0 0 0 0 0 0 0 0 0 0 0 36517 516 32624 304183;304184;304185 240670;240671 240671 671;672 1 MVMIQDGPLPTGADK Oxidation (M) 1587.7637 0.7636644 3873 Q96I24 FUBP3 Far upstream element-binding protein 3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.91 2.75 3 19 3 1 1 1 1 1 2 2 2 2 2 2 2 64.935 64.18 2 1.3471E-16 79100 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.76 100.52 142980000 0 60557000 0 3616300 2304900 2853700 3457800 4655700 3021200 11719000 10548000 5103700 10282000 8045700 16811000 36518 3873 32625 304186;304187;304188;304189;304190;304191;304192;304193;304194;304195;304196;304197;304198;304199;304200;304201;304202;304203;304204;304205;304206;304207 240672;240673;240674;240675;240676;240677;240678;240679;240680;240681;240682;240683;240684;240685;240686;240687;240688;240689;240690;240691;240692;240693 240676 5384;5385 22 MVMIQDGPLPTGADK 2 Oxidation (M) 1603.7586 0.75857903 3873 Q96I24 FUBP3 Far upstream element-binding protein 3 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 2 1 1 2 1 1 1 57.029 57.082 2 3.5735E-05 64579 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 72.531 54.712 28059000 0 0 0 0 2672300 3496600 3780800 3043200 0 3735600 0 0 6628500 4701500 0 36519 3873 32625 304208;304209;304210;304211;304212;304213;304214;304215;304216;304217 240694;240695;240696;240697;240698;240699;240700;240701 240695 5384;5385 8 MVMIQDGPLPTGADK Unmodified 1571.7687 0.76874978 3873 Q96I24 FUBP3 Far upstream element-binding protein 3 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 72.642 72.295 2 1.7246E-28 82611 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 143.17 116.57 313910000 0 186760000 0 4114500 6291100 9006300 6876200 0 4766700 14149000 13792000 13727000 9947500 12943000 31536000 36520 3873 32625 304218;304219;304220;304221;304222;304223;304224;304225;304226;304227;304228;304229 240702;240703;240704;240705;240706;240707;240708 240705 5 MVMIQDGPQNTGADK 2 Oxidation (M) 1635.7233 0.72325615 3737 Q96AE4 FUBP1 Far upstream element-binding protein 1 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.53 3.67 1 7 2 22 3 7 1 2 2 2 1 2 2 2 2 2 2 2 34.414 33.684 2 6.5803E-72 38661 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 195.25 180.56 342150000 39681000 99105000 0 6718800 12034000 14272000 16859000 5155000 13454000 17424000 21233000 31195000 18734000 20965000 25315000 36521 3737 32626 304230;304231;304232;304233;304234;304235;304236;304237;304238;304239;304240;304241;304242;304243;304244;304245;304246;304247;304248;304249;304250;304251;304252;304253;304254;304255;304256;304257;304258;304259;304260;304261 240709;240710;240711;240712;240713;240714;240715;240716;240717;240718;240719;240720;240721;240722;240723;240724;240725;240726;240727;240728;240729;240730;240731;240732;240733;240734;240735;240736;240737;240738;240739;240740;240741;240742 240716 5312;5313 34 MVMIQDGPQNTGADK Oxidation (M) 1619.7283 0.72834153 3737 Q96AE4 FUBP1 Far upstream element-binding protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.42 10 2 35 3 9 4 2 3 3 3 4 2 3 3 3 3 2 39.211 38.199 2 3.1531E-81 45682 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 206.1 168.75 1161300000 30276000 670080000 0 31945000 17967000 26196000 27765000 22239000 31970000 33611000 58884000 63539000 37160000 42459000 67242000 36522 3737 32626 304262;304263;304264;304265;304266;304267;304268;304269;304270;304271;304272;304273;304274;304275;304276;304277;304278;304279;304280;304281;304282;304283;304284;304285;304286;304287;304288;304289;304290;304291;304292;304293;304294;304295;304296;304297;304298;304299;304300;304301;304302;304303;304304;304305;304306;304307;304308 240743;240744;240745;240746;240747;240748;240749;240750;240751;240752;240753;240754;240755;240756;240757;240758;240759;240760;240761;240762;240763;240764;240765;240766;240767;240768;240769;240770;240771;240772;240773;240774;240775;240776;240777;240778;240779;240780;240781;240782 240751 5312;5313 39 MVMIQDGPQNTGADK Unmodified 1603.7334 0.73342691 3737 Q96AE4 FUBP1 Far upstream element-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.11 3.8 6 1 12 1 6 1 1 1 1 1 1 1 1 1 1 1 1 48.179 46.525 2;3 1.2113E-49 61660 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 160.36 142.55 2787900000 25115000 2113600000 0 21303000 27482000 27466000 26126000 30421000 20310000 45949000 68389000 90665000 35419000 60886000 194790000 36523 3737 32626 304309;304310;304311;304312;304313;304314;304315;304316;304317;304318;304319;304320;304321;304322;304323;304324;304325;304326;304327 240783;240784;240785;240786;240787;240788;240789;240790;240791;240792;240793;240794;240795;240796;240797;240798;240799;240800;240801;240802 240794 20 MVMISLEGEDGLDEIYSFSESLRK 2 Oxidation (M) 2779.2932 0.293213 974 P13010 XRCC5 X-ray repair cross-complementing protein 5 yes yes 0 2 1 By MS/MS By MS/MS 2.5 0.5 2 2 2 2 97.523 92.6 3 6.1732E-160 115872 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 212.39 205.74 261500000 205140000 56352000 0 0 0 0 0 0 0 0 0 0 0 0 0 36524 974 32627 304328;304329;304330;304331 240803;240804;240805;240806 240806 1298;1299 4 MVMISLEGEDGLDEIYSFSESLRK Unmodified 2747.3034 0.30338375 974 P13010 XRCC5 X-ray repair cross-complementing protein 5 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 99.208 93.751 3 4.2539E-133 117658 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 193.11 181.86 515260000 474310000 40943000 0 0 0 0 0 0 0 0 0 0 0 0 0 36525 974 32627 304332;304333;304334 240807;240808;240809;240810 240809 4 MVMISLEGEDGLDEIYSFSESLRK Oxidation (M) 2763.2983 0.29829837 974 P13010 XRCC5 X-ray repair cross-complementing protein 5 yes yes 0 1 1 By MS/MS 2 0 1 1 98.557 90.426 3 8.3413E-05 116584 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.728 51.927 391500000 391500000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36526 974 32627 304335 240811 240811 1298;1299 1 MVNGVTPSEELGEHPK Unmodified 1722.8247 0.82468476 202 O14686 KMT2D Histone-lysine N-methyltransferase 2D yes yes 0 0 0 By MS/MS By MS/MS By matching 7.33 3.77 1 2 1 1 1 47.585 45.991 3 2.5752E-05 60474 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.772 65.951 47154000 0 31033000 0 0 0 0 0 0 0 0 0 0 0 5628100 10494000 36527 202 32628 304336;304337;304338 240812;240813;240814;240815;240816;240817 240816 6 MVNHFIAEFK Oxidation (M) 1250.6118 0.61177885 934 P11142 HSPA8 Heat shock cognate 71 kDa protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.61 3.03 4 19 2 2 1 1 2 2 2 2 1 2 2 1 2 1 58.933 58.093 2;3 7.941E-10 65288 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 150.08 106.31 2064800000 42518000 11598000 0 40128000 19584000 234450000 148830000 125780000 156140000 38447000 285510000 351950000 70403000 377020000 162460000 36528 934 32629 304339;304340;304341;304342;304343;304344;304345;304346;304347;304348;304349;304350;304351;304352;304353;304354;304355;304356;304357;304358;304359;304360;304361 240818;240819;240820;240821;240822;240823;240824;240825;240826;240827;240828;240829;240830;240831;240832;240833;240834;240835;240836;240837;240838 240819 1213 13 MVNHFIAEFK Unmodified 1234.6169 0.61686423 934 P11142 HSPA8 Heat shock cognate 71 kDa protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.43 2.06 1 13 1 1 1 1 1 1 1 1 1 1 1 1 2 65.42 64.956 2;3 0.0014872 73581 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.03 61.598 1046200000 7930100 0 0 11841000 8286700 46972000 15909000 36423000 29141000 43193000 62057000 98252000 37462000 79228000 569490000 36529 934 32629 304362;304363;304364;304365;304366;304367;304368;304369;304370;304371;304372;304373;304374;304375 240839;240840;240841;240842;240843;240844;240845;240846;240847;240848;240849;240850;240851 240843 6 MVNLSECMDPK Unmodified 1322.5669 0.56687885 644 O95352 ATG7 Ubiquitin-like modifier-activating enzyme ATG7 yes yes 0 0 0 By MS/MS 2 0 1 1 63.047 57.154 2 0.00762 73451 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.1 57.473 9115100 0 9115100 0 0 0 0 0 0 0 0 0 0 0 0 0 36530 644 32630 304376 240852 240852 1 MVNPTTVLESPHSLPAK Unmodified 1819.9502 0.95021962 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.39 3.7 5 1 12 1 3 2 1 1 1 1 1 1 1 1 1 1 1 1 75.884 74.46 2;3 1.9278E-05 95085 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.453 81.708 3795700000 1458300000 1870500000 256520000 6475900 5016900 18390000 6744800 18018000 7568300 23849000 14022000 25332000 9666200 23242000 52100000 36531 3119 32631 304377;304378;304379;304380;304381;304382;304383;304384;304385;304386;304387;304388;304389;304390;304391;304392;304393;304394 240853;240854;240855;240856;240857;240858;240859;240860;240861;240862;240863;240864;240865;240866;240867;240868;240869;240870;240871;240872;240873;240874 240863 22 MVNPTTVLESPHSLPAK Oxidation (M) 1835.9451 0.94513424 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 2 2 3 73.959 69.045 2;3 1.0494E-26 89928 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 124.25 111.83 1788500000 633560000 878660000 276270000 0 0 0 0 0 0 0 0 0 0 0 0 36532 3119 32631 304395;304396;304397;304398;304399;304400;304401 240875;240876;240877;240878;240879;240880;240881;240882;240883;240884;240885 240879 4733 9 MVNPTVFFDIAVDGEPLGR Acetyl (Protein N-term) 2118.0456 0.045576569 1931 P62937 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes yes 1 0 0 By MS/MS 2 0 1 1 104.88 100.14 2 9.1511E-05 123635 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.486 66.51 4962900 0 4962900 0 0 0 0 0 0 0 0 0 0 0 0 0 36533 1931 32632 304402 240886 240886 1 MVNPTVFFDIAVDGEPLGRVSFELFADK Acetyl (Protein N-term);Oxidation (M) 3170.5634 0.56343826 1931 P62937 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes yes 1 1 1 By MS/MS By MS/MS 2.5 0.5 2 2 2 2 104.63 99.577 3 8.8833E-57 124558 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 118.01 107.68 22487000 14902000 7585100 0 0 0 0 0 0 0 0 0 0 0 0 0 36534 1931 32633 304403;304404;304405;304406 240887;240888;240889 240888 3111 3 MVNPTVFFDIAVDGEPLGRVSFELFADK Acetyl (Protein N-term) 3154.5685 0.56852364 1931 P62937 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes yes 1 0 1 By MS/MS By MS/MS 2 0 2 1 1 106.25 99.806 3 1.053E-35 125740 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 99.954 92.088 17097000 13996000 3100400 0 0 0 0 0 0 0 0 0 0 0 0 0 36535 1931 32633 304407;304408 240890;240891;240892 240892 3 MVNYIQMK Unmodified 1025.5038 0.50380831 2884 Q6IBS0 TWF2 Twinfilin-2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 61.045 53.99 2 0.011129 73380 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.34 92.302 124260000 49270000 74993000 0 0 0 0 0 0 0 0 0 0 0 0 0 36536 2884 32634 304409;304410 240893;240894;240895 240894 3 MVPAGMGAGLER 2 Oxidation (M) 1219.5689 0.56892776 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 28.771 28.941 2 0.0011477 31559 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 60.102 50.745 398370000 0 0 0 26071000 26728000 21908000 31040000 34907000 28992000 35678000 0 57474000 58236000 35186000 42150000 36537 1681 32635 304411;304412;304413;304414;304415;304416;304417;304418;304419;304420;304421 240896;240897;240898;240899;240900;240901;240902;240903;240904;240905;240906;240907;240908 240903 2725;2726 12 MVPAGMGAGLER Oxidation (M) 1203.574 0.57401314 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 2 1 2 2 2 2 2 2 2 2 1 38.733 38.905 2 3.6517E-05 38420 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 90.108 69.207 420940000 0 0 0 22264000 23313000 24972000 46230000 48985000 39953000 33606000 29825000 81756000 36955000 33082000 0 36538 1681 32635 304422;304423;304424;304425;304426;304427;304428;304429;304430;304431;304432;304433;304434;304435;304436;304437;304438;304439;304440;304441 240909;240910;240911;240912;240913;240914;240915;240916;240917;240918;240919;240920;240921;240922;240923;240924;240925;240926;240927;240928 240921 2725;2726 20 MVPAGMGAGLER Unmodified 1187.5791 0.57909852 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 3 1 1 1 1 1 1 1 1 1 1 53.598 53.799 2 2.9043E-05 60057 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.254 86.018 476630000 0 0 0 27373000 0 36514000 39170000 64837000 0 42419000 48379000 49245000 43288000 49550000 75851000 36539 1681 32635 304442;304443;304444;304445;304446;304447;304448;304449;304450;304451;304452;304453;304454;304455 240929;240930;240931;240932;240933;240934;240935;240936;240937;240938;240939;240940;240941;240942;240943;240944;240945;240946;240947;240948;240949;240950;240951;240952;240953;240954 240938 25 MVPDFYVDSIADLLPALQG Oxidation (M) 2079.0234 0.023444144 23 A6NDG6 PGP Phosphoglycolate phosphatase yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 103.42 96.991 2 7.1714E-31 122111 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.69 117.31 74602000 21233000 53369000 0 0 0 0 0 0 0 0 0 0 0 0 0 36540 23 32636 304456;304457 240955;240956;240957 240955 23 3 MVPDFYVDSIADLLPALQG Unmodified 2063.0285 0.028529522 23 A6NDG6 PGP Phosphoglycolate phosphatase yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 103.93 99.753 3 0.044228 122999 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 21.901 16.797 25583000 0 25583000 0 0 0 0 0 0 0 0 0 0 0 0 0 36541 23 32636 304458;304459 240958 240958 1 MVPFLHSDSTYK Unmodified 1423.6806 0.6805867 3097 Q7Z4G4 TRMT11 tRNA (guanine(10)-N2)-methyltransferase homolog yes yes 0 0 0 By MS/MS 2 0 1 1 72.803 64.607 3 0.010361 85629 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.659 40.694 41891000 41891000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36542 3097 32637 304460 240959 240959 1 MVPFLHSDSTYK Oxidation (M) 1439.6755 0.67550132 3097 Q7Z4G4 TRMT11 tRNA (guanine(10)-N2)-methyltransferase homolog yes yes 0 1 0 By MS/MS 2 0 1 1 64.035 55.756 3 0.01955 75042 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.915 33.906 21539000 21539000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36543 3097 32637 304461 240960 240960 4707 0 MVPIPAGVFTMGTDDPQIK Unmodified 2016.006 0.0060199404 3397 Q8NBK3 SUMF1 Sulfatase-modifying factor 1 yes yes 0 0 0 By MS/MS 2 0 2 2 96.559 91.737 2;3 2.9819E-12 113680 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.468 80.2 12935000 0 12935000 0 0 0 0 0 0 0 0 0 0 0 0 0 36544 3397 32638 304462;304463 240961;240962 240962 2 MVPLLNK Unmodified 813.47825 0.47824549 1010 P14923 JUP Junction plakoglobin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 53.308 53.522 2 0.023328 60466 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 91.093 63.973 600620000 0 0 0 0 39400000 41712000 37674000 153730000 32864000 44065000 48495000 62198000 83151000 24367000 32962000 36545 1010 32639 304464;304465;304466;304467;304468;304469;304470;304471;304472;304473;304474 240963;240964;240965;240966;240967;240968;240969;240970;240971;240972 240968 10 MVPLLNK Oxidation (M) 829.47316 0.47316011 1010 P14923 JUP Junction plakoglobin yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.087 42.264 2 0.032723 46446 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 63.642 35.07 523020000 0 0 0 114440000 24278000 28938000 26670000 124760000 20919000 27788000 31142000 31128000 54932000 18335000 19693000 36546 1010 32639 304475;304476;304477;304478;304479;304480;304481;304482;304483;304484;304485;304486 240973;240974 240973 2 MVPSEFSTGPVEK Oxidation (M) 1422.6701 0.67008159 2952 Q6PI98 INO80C INO80 complex subunit C yes yes 0 1 0 By MS/MS 2 0 1 1 55.354 49.54 2 0.0005073 64093 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.363 74.156 19042000 0 19042000 0 0 0 0 0 0 0 0 0 0 0 0 0 36547 2952 32640 304487 240975 240975 4583 1 MVPSEFSTGPVEK Unmodified 1406.6752 0.67516697 2952 Q6PI98 INO80C INO80 complex subunit C yes yes 0 0 0 By MS/MS 2 0 1 1 62.716 56.823 2 6.6091E-05 72839 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.568 89.648 60469000 0 60469000 0 0 0 0 0 0 0 0 0 0 0 0 0 36548 2952 32640 304488 240976 240976 1 MVPTSDK Oxidation (M) 792.36875 0.36875462 980 P13639 EEF2 Elongation factor 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.91 3.9 2 3 2 4 3 4 1 1 1 1 24.464 23.583 2 0.025782 100242 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 94.407 37.305 1503600000 220780000 1272300000 0 0 0 0 0 0 0 0 2622900 0 1332300 1849100 4659400 36549 980 32641 304489;304490;304491;304492;304493;304494;304495;304496;304497;304498;304499 240977;240978;240979;240980;240981;240982 240982 6 MVPTSDK Unmodified 776.37384 0.37383999 980 P13639 EEF2 Elongation factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 8 3.46 3 9 1 1 1 1 1 1 1 1 1 1 1 1 9.0785 8.366 2 0.023433 6373 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.359 32.676 4925000000 388370000 4480300000 15846000 4329100 2658900 3526900 2923300 0 2411600 2263200 0 0 2149300 4489000 15704000 36550 980 32641 304500;304501;304502;304503;304504;304505;304506;304507;304508;304509;304510;304511 240983;240984 240983 2 MVPVSVQQSLAAYNQR Oxidation (M) 1805.9094 0.90941744 3549 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 70.967 71.177 2 1.2252E-20 81923 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 112.15 98.947 28634000 0 0 0 0 0 5714800 2727600 3146600 0 3285800 2961700 5483900 0 0 5313600 36551 3549 32642 304512;304513;304514;304515;304516;304517;304518 240985;240986;240987;240988;240989;240990;240991 240986 5045 5 MVPVSVQQSLAAYNQR Unmodified 1789.9145 0.91450282 3549 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 2 1 1 1 75.614 75.783 2;3 7.3576E-08 87471 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 101.93 92.395 48108000 0 0 0 0 0 0 0 2960800 0 19544000 0 7442700 7464400 0 10696000 36552 3549 32642 304519;304520;304521;304522;304523;304524 240992;240993;240994 240992 2 MVPVSVQQSLAAYNQRK Oxidation (M) 1934.0044 0.0043804565 3549 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein yes yes 0 1 1 By MS/MS 2 0 1 1 73.216 65.02 3 0.00010126 86233 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.562 60.682 8688000 8688000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36553 3549 32643 304525 240995;240996 240996 5045 2 MVPVSVQQSLAAYNQRK Unmodified 1918.0095 0.0094658344 3549 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein yes yes 0 0 1 By MS/MS 2 0 1 1 77.518 69.388 3 3.514E-07 91356 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.163 92.322 18295000 18295000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36554 3549 32643 304526 240997 240997 1 MVQDGDFVR Unmodified 1065.4913 0.49132937 3744 Q96AY3 FKBP10 Peptidyl-prolyl cis-trans isomerase FKBP10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 40.602 40.904 2 0.0051747 45511 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 81.296 65.152 130900000 0 0 0 0 4596500 0 0 6965700 0 16900000 18137000 18030000 14605000 16059000 35610000 36555 3744 32644 304527;304528;304529;304530;304531;304532;304533;304534;304535 240998;240999;241000;241001;241002;241003;241004;241005;241006 240999 9 MVQEAEK Oxidation (M) 849.39022 0.39021834 934;908 P11142;P0DMV9;P0DMV8 HSPA8;HSPA1B;HSPA1A Heat shock cognate 71 kDa protein;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A no no 0 1 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 5.6561 5.7479 2 0.032179 2625 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 64.803 40.831 19912000 0 0 0 2605400 2089400 3340800 2987500 2348500 1817100 0 1556800 0 1444400 1722200 0 36556 934;908 32645 304536;304537;304538;304539;304540;304541;304542;304543;304544 241007;241008 241008 1169;1210 2 MVQEAEK Unmodified 833.3953 0.39530372 934;908 P11142;P0DMV9;P0DMV8 HSPA8;HSPA1B;HSPA1A Heat shock cognate 71 kDa protein;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A no no 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching 7.71 3.61 2 5 1 1 1 1 1 1 1 6.9852 6.0762 2 0.020538 4664 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 108.24 81.442 450510000 27342000 299050000 0 20661000 0 0 35067000 31996000 0 0 0 23652000 12750000 0 0 36557 934;908 32645 304545;304546;304547;304548;304549;304550;304551 241009;241010;241011;241012 241009 4 MVQFEENGRK Unmodified 1236.5921 0.59210605 1570 P49368 CCT3 T-complex protein 1 subunit gamma yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.66 2.95 4 1 24 2 2 1 2 2 2 2 2 2 2 2 2 2 2 2 25.871 25.233 2;3 0.00049986 27011 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 83.647 79.308 2531200000 614990000 227070000 253060000 71674000 88725000 140490000 106720000 108340000 70777000 114530000 128470000 171030000 94990000 119020000 221340000 36558 1570 32646 304552;304553;304554;304555;304556;304557;304558;304559;304560;304561;304562;304563;304564;304565;304566;304567;304568;304569;304570;304571;304572;304573;304574;304575;304576;304577;304578;304579;304580 241013;241014;241015;241016;241017;241018;241019;241020;241021;241022;241023;241024;241025;241026;241027;241028;241029;241030;241031;241032;241033;241034;241035;241036;241037;241038;241039;241040;241041;241042;241043;241044 241013 26 MVQFEENGRK Oxidation (M) 1252.587 0.58702067 1570 P49368 CCT3 T-complex protein 1 subunit gamma yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.03 3.78 10 3 21 4 6 3 2 1 2 2 1 2 2 2 2 2 2 1 19.003 17.756 2;3 0.00051171 22135 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 102.07 95.094 2130000000 358450000 258910000 753290000 54802000 25588000 78062000 62317000 25207000 49557000 66467000 72054000 125130000 84020000 64121000 52063000 36559 1570 32646 304581;304582;304583;304584;304585;304586;304587;304588;304589;304590;304591;304592;304593;304594;304595;304596;304597;304598;304599;304600;304601;304602;304603;304604;304605;304606;304607;304608;304609;304610;304611;304612;304613;304614 241045;241046;241047;241048;241049;241050;241051;241052;241053;241054;241055;241056;241057;241058;241059;241060;241061;241062;241063;241064;241065;241066 241053 2518 11 MVQLNEEK Unmodified 989.48518 0.48518136 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 28.33 27.089 2 0.0074056 29411 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 89.752 48.525 18744000 0 11332000 0 0 0 0 0 0 0 0 0 0 3983600 3427900 0 36560 2446 32647 304615;304616;304617;304618 241067;241068;241069;241070 241070 4 MVQVGLLPK Unmodified 983.58377 0.58377319 3671 Q92845 KIFAP3 Kinesin-associated protein 3 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 74.656 68.95 2 0.040035 91140 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 91.906 67.012 12742000 11261000 0 1480900 0 0 0 0 0 0 0 0 0 0 0 0 36561 3671 32648 304619;304620 241071 241071 0 MVQVGVPVMAIR Unmodified 1298.7203 0.72028345 5155 Q9Y3C0 CCDC53 WASH complex subunit CCDC53 yes yes 0 0 0 By MS/MS 10 0 1 1 82.035 82.237 2 0.0053061 94841 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.722 39.572 8308300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8308300 36562 5155 32649 304621 241072 241072 1 MVRSGNK Acetyl (Protein N-term);Oxidation (M) 848.41744 0.41743614 974 P13010 XRCC5 X-ray repair cross-complementing protein 5 yes yes 1 1 1 By MS/MS 2 0 1 1 0.74968 -2.5379 2 0.017107 754 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.799 29.509 9736600 9736600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36563 974 32650 304622 241073;241074;241075;241076;241077 241075 1300 5 MVSAAFMK Oxidation (M) 899.4245 0.42449536 1183 P25205 MCM3 DNA replication licensing factor MCM3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.12 2.62 6 1 1 2 3 2 1 41.8 37.175 2 0.022809 42461 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 79.469 56.539 267920000 166640000 61366000 32877000 0 0 0 0 0 0 0 0 7037800 0 0 0 36564 1183 32651 304623;304624;304625;304626;304627;304628;304629;304630 241078;241079;241080;241081;241082;241083;241084;241085 241083 8 MVSAAFMK 2 Oxidation (M) 915.41941 0.41940998 1183 P25205 MCM3 DNA replication licensing factor MCM3 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS 2.67 0.471 1 2 1 1 1 28.574 24.472 2 0.027424 24767 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 73.616 52.632 31513000 3464300 7759600 20289000 0 0 0 0 0 0 0 0 0 0 0 0 36565 1183 32651 304631;304632;304633 241086;241087;241088 241086 1 MVSAAFMK Unmodified 883.42958 0.42958073 1183 P25205 MCM3 DNA replication licensing factor MCM3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 57.159 51.178 2 0.04418 69637 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.915 52.761 785790000 513500000 232630000 39667000 0 0 0 0 0 0 0 0 0 0 0 0 36566 1183 32651 304634;304635;304636 241089 241089 1 MVSADAYK Oxidation (M) 899.40587 0.4058684 888 P09543 CNP 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 16 2 2 2 2 1 2 1 1 1 1 1 16.054 16.139 2 0.02105 14938 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 54.611 23.382 66795000 0 0 0 8477600 4440100 4811100 6007000 2008800 7700200 3318900 7154200 11449000 5864600 5563900 0 36567 888 32652 304637;304638;304639;304640;304641;304642;304643;304644;304645;304646;304647;304648;304649;304650;304651;304652 241090;241091;241092 241091 3 MVSADAYK Unmodified 883.41095 0.41095378 888 P09543 CNP 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 23.278 23.574 2 0.017693 24176 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 65.252 41.066 147210000 0 0 0 0 0 9583500 9700200 10027000 565670 16355000 21602000 21676000 18589000 15771000 23339000 36568 888 32652 304653;304654;304655;304656;304657;304658;304659;304660;304661;304662 241093;241094;241095;241096;241097 241094 4 MVSAEISENRK Oxidation (M) 1278.6238 0.6238001 2890 Q6IQ49 SDE2 Protein SDE2 homolog yes yes 0 1 1 By MS/MS 2 0 2 2 20.019 17.305 3 0.0038983 22334 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 58.889 42.883 12710000 0 0 12710000 0 0 0 0 0 0 0 0 0 0 0 0 36569 2890 32653 304663;304664 241098;241099;241100 241100 4525 3 MVSAEISENRK Unmodified 1262.6289 0.62888548 2890 Q6IQ49 SDE2 Protein SDE2 homolog yes yes 0 0 1 By MS/MS 2 0 1 1 26.666 23.609 3 0.0011358 30003 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 82.417 56.795 12642000 0 0 12642000 0 0 0 0 0 0 0 0 0 0 0 0 36570 2890 32653 304665 241101 241101 1 MVSDINNAWGCLEQVEK Oxidation (M) 2007.903 0.90301143 971 P12814 ACTN1 Alpha-actinin-1 yes yes 0 1 0 By MS/MS 10 0 1 1 80.624 80.839 2 3.1528E-41 93183 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 146.5 137.99 10092000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10092000 36571 971 32654 304666 241102 241102 1286 1 MVSDINNGWQHLEQAEK Oxidation (M) 2013.9214 0.92143869 356 O43707 ACTN4 Alpha-actinin-4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.12 3.79 4 1 3 1 3 1 1 1 1 66.76 63.3 2;3 1.4562E-87 78292 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 198.15 190.91 1026800000 38268000 637780000 234260000 0 0 26944000 0 0 0 0 0 0 0 21479000 68078000 36572 356 32655 304667;304668;304669;304670;304671;304672;304673;304674 241103;241104;241105;241106;241107;241108;241109;241110;241111;241112;241113 241112 453 11 MVSDINNGWQHLEQAEK Unmodified 1997.9265 0.92652407 356 O43707 ACTN4 Alpha-actinin-4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.08 3.93 5 1 6 1 3 2 1 1 1 1 1 1 70.825 68.572 2;3 0 87534 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 396.87 359.54 2069200000 69484000 1602800000 183310000 0 0 17085000 0 0 0 0 27403000 15212000 8591800 16266000 129070000 36573 356 32655 304675;304676;304677;304678;304679;304680;304681;304682;304683;304684;304685;304686 241114;241115;241116;241117;241118;241119;241120;241121;241122;241123;241124;241125;241126;241127;241128 241115 15 MVSEEMEEQVHSIR Unmodified 1702.7655 0.76545532 4043 Q99661 KIF2C Kinesin-like protein KIF2C yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 54.219 54.465 3 0.0018691 61833 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 49.482 43.702 43778000 0 0 0 0 0 4094100 2873000 6266500 0 3245600 7377000 0 0 6447600 13475000 36574 4043 32656 304687;304688;304689;304690;304691;304692;304693 241129;241130 241129 1 MVSEEMEEQVHSIR Oxidation (M) 1718.7604 0.76036994 4043 Q99661 KIF2C Kinesin-like protein KIF2C yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 2 1 1 1 1 47.826 48.293 3 0.00025711 54139 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 62.68 55.994 38193000 0 0 0 0 0 0 0 0 0 7576400 0 11278000 0 4574000 14765000 36575 4043 32656 304694;304695;304696;304697;304698;304699;304700;304701 241131;241132;241133;241134;241135;241136;241137 241132 5548 7 MVSHLAEEFK Unmodified 1189.5801 0.58014438 1743 P54652 HSPA2 Heat shock-related 70 kDa protein 2 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 45.902 46.299 3 0.019265 50713 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.718 35.455 26699000 0 0 0 0 0 0 0 0 0 6933500 9601800 0 0 2575900 7587600 36576 1743 32657 304702;304703;304704;304705 241138 241138 1 MVSHSELRK Acetyl (Protein N-term);Oxidation (M) 1143.5706 0.57064232 1972 P78330 PSPH Phosphoserine phosphatase yes yes 1 1 1 By MS/MS By matching 2 0 3 2 1 18.537 14.34 2;3 0.01114 21070 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.066 29.766 91298000 78924000 12375000 0 0 0 0 0 0 0 0 0 0 0 0 0 36577 1972 32658 304706;304707;304708 241139;241140 241140 3164 1 MVSHSELRK Acetyl (Protein N-term) 1127.5757 0.5757277 1972 P78330 PSPH Phosphoserine phosphatase yes yes 1 0 1 By MS/MS 2 0 1 1 30.999 25.28 2 0.00067013 35449 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 161.86 129.51 34260000 34260000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36578 1972 32658 304709 241141 241141 0 MVSISNYPLSAALTCAK Unmodified 1824.9114 0.91139127 3694 Q92979 EMG1 Ribosomal RNA small subunit methyltransferase NEP1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 90.841 84.327 2 0.0071375 106697 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.004 43.126 26885000 5092600 21792000 0 0 0 0 0 0 0 0 0 0 0 0 0 36579 3694 32659 304710;304711 241142;241143 241142 2 MVSQSQPGSR Unmodified 1075.508 0.50804206 456 O75122 CLASP2 CLIP-associating protein 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 8.8259 8.8694 2 0.023046 7095 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 45.74 23.503 8532300 0 0 0 1011900 0 856700 1611200 0 0 2197200 0 2855300 0 0 0 36580 456 32660 304712;304713;304714;304715;304716;304717 241144;241145 241144 2 MVSVLPIFR Oxidation (M) 1076.6052 0.60523691 3391 Q8NBF2 NHLRC2 NHL repeat-containing protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 84.707 84.808 2 0.0024928 97879 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.942 78.475 19651000 0 0 0 0 0 4739500 0 0 0 0 0 0 1575100 3358400 9978100 36581 3391 32661 304718;304719;304720;304721 241146;241147;241148;241149 241147 4951 4 MVSVLPIFR Unmodified 1060.6103 0.61032229 3391 Q8NBF2 NHLRC2 NHL repeat-containing protein 2 yes yes 0 0 0 By MS/MS 10 0 1 1 89.047 89.19 2 0.014114 103174 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.782 44.118 5669600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5669600 36582 3391 32661 304722 241150 241150 1 MVSYIQCK Oxidation (M) 1043.478 0.47798749 3702 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 0 1 0 By MS/MS By matching 2 0 2 1 1 31.27 27.446 2 0.042776 35485 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.799 44.668 36159000 0 35773000 386270 0 0 0 0 0 0 0 0 0 0 0 0 36583 3702 32662 304723;304724 241151 241151 1 MVSYIQCK Unmodified 1027.4831 0.48307287 3702 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 42.589 36.645 2 0.022229 50074 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.753 56.615 204930000 74772000 130160000 0 0 0 0 0 0 0 0 0 0 0 0 0 36584 3702 32662 304725;304726 241152;241153 241153 2 MVTEQEVDAIGQTLVDPK Acetyl (Protein N-term);Oxidation (M) 2029.9878 0.98778692 4158 Q9BU89 DOHH Deoxyhypusine hydroxylase yes yes 1 1 0 By MS/MS 10 0 1 1 93.634 93.775 2 0.00023411 108748 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.915 40.531 1968900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1968900 36585 4158 32663 304727 241154 241154 5642 1 MVTETEETQEK Oxidation (M) 1339.5813 0.58132617 2890 Q6IQ49 SDE2 Protein SDE2 homolog yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 10.308 10.421 2 0.001459 8762 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 68.735 64.848 23261000 0 0 0 2222800 1977800 1915800 2227700 0 1347700 1945800 0 3522600 2562900 2384600 3153100 36586 2890 32664 304728;304729;304730;304731;304732;304733;304734;304735;304736;304737 241155;241156;241157;241158;241159;241160;241161 241160 4526 7 MVTETEETQEK Unmodified 1323.5864 0.58641154 2890 Q6IQ49 SDE2 Protein SDE2 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.147 16.323 2 0.00029458 15762 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 114.51 104.14 89069000 0 0 0 4117900 5126400 4615200 4732700 5235000 3711300 7809300 12012000 10723000 8463700 8340100 14182000 36587 2890 32664 304738;304739;304740;304741;304742;304743;304744;304745;304746;304747;304748;304749 241162;241163;241164;241165;241166;241167;241168;241169;241170;241171 241170 10 MVTPYANGWK Unmodified 1165.559 0.559015 309 O43251 RBFOX2 RNA binding protein fox-1 homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 59.261 58.489 2 0.0028091 78631 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 100.45 91.057 130870000 10226000 0 0 6105600 1968400 0 2216000 65999000 0 7156400 11149000 13421000 8476400 4148100 0 36588 309 32665 304750;304751;304752;304753;304754;304755;304756;304757;304758;304759 241172;241173 241172 2 MVVDAVMMLDDLLQLK 3 Oxidation (M) 1880.9297 0.92974345 4065 Q99832 CCT7 T-complex protein 1 subunit eta yes yes 0 3 0 By MS/MS By MS/MS 2.5 0.5 2 2 1 3 99.401 95.369 2 6.005E-24 118047 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.21 117.29 25825000 0 25825000 0 0 0 0 0 0 0 0 0 0 0 0 0 36589 4065 32666 304760;304761;304762;304763 241174;241175;241176;241177 241174 5567;5568;5569 4 MVVDAVMMLDDLLQLK 2 Oxidation (M) 1864.9348 0.93482883 4065 Q99832 CCT7 T-complex protein 1 subunit eta yes yes 0 2 0 By MS/MS By MS/MS 2.38 0.487 8 5 5 8 102.11 96.809 2;3 7.4577E-11 119104 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 111.94 86.594 106290000 50733000 55559000 0 0 0 0 0 0 0 0 0 0 0 0 0 36590 4065 32666 304764;304765;304766;304767;304768;304769;304770;304771;304772;304773;304774;304775;304776 241178;241179;241180;241181;241182;241183;241184;241185;241186 241184 5567;5568;5569 6 MVVDAVMMLDDLLQLK Oxidation (M) 1848.9399 0.93991421 4065 Q99832 CCT7 T-complex protein 1 subunit eta yes yes 0 1 0 By MS/MS By MS/MS 2.47 0.499 8 7 4 11 103.65 99.261 2;3 6.7522E-24 123612 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 115.91 97.314 43938000 5454900 38483000 0 0 0 0 0 0 0 0 0 0 0 0 0 36591 4065 32666 304777;304778;304779;304780;304781;304782;304783;304784;304785;304786;304787;304788;304789;304790;304791 241187;241188;241189;241190;241191;241192;241193;241194;241195 241194 5567;5568;5569 6 MVVDAVMMLDDLLQLK Unmodified 1832.945 0.94499959 4065 Q99832 CCT7 T-complex protein 1 subunit eta yes yes 0 0 0 By MS/MS By MS/MS 2 0.816 1 1 1 1 2 106.41 105.36 2 9.5569E-08 120994 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 131.17 118.41 40922000 27024000 13898000 0 0 0 0 0 0 0 0 0 0 0 0 0 36592 4065 32666 304792;304793;304794 241196;241197 241196 2 MVVESAYEVIK Oxidation (M) 1282.6479 0.64788959 836 P07195 LDHB L-lactate dehydrogenase B chain yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3.93 3.27 1 26 8 10 11 13 11 1 1 1 1 1 1 1 1 1 1 66.793 63.926 2 3.1404E-09 83584 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 137.95 118.68 11785000000 939070000 9235500000 537210000 12617000 0 20914000 24942000 19090000 16160000 25184000 197780000 167970000 0 129680000 458770000 36593 836 32667 304795;304796;304797;304798;304799;304800;304801;304802;304803;304804;304805;304806;304807;304808;304809;304810;304811;304812;304813;304814;304815;304816;304817;304818;304819;304820;304821;304822;304823;304824;304825;304826;304827;304828;304829;304830;304831;304832;304833;304834;304835;304836;304837;304838;304839 241198;241199;241200;241201;241202;241203;241204;241205;241206;241207;241208;241209;241210;241211;241212;241213;241214;241215;241216;241217;241218;241219;241220;241221;241222;241223;241224;241225;241226;241227;241228;241229;241230;241231;241232;241233;241234;241235;241236;241237;241238;241239;241240;241241;241242;241243;241244;241245;241246;241247;241248;241249;241250;241251;241252;241253;241254;241255;241256;241257;241258;241259 241206 1023 58 MVVESAYEVIK Unmodified 1266.653 0.65297497 836 P07195 LDHB L-lactate dehydrogenase B chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.67 3.86 7 2 12 2 6 1 1 1 1 1 1 1 1 1 1 1 1 1 72.888 71.14 2 0.00042321 81304 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 101.65 89.119 20877000000 1010100000 17832000000 619640000 6322300 9811400 19706000 12638000 20404000 9543900 22327000 198210000 132390000 15195000 116070000 853530000 36594 836 32667 304840;304841;304842;304843;304844;304845;304846;304847;304848;304849;304850;304851;304852;304853;304854;304855;304856;304857;304858;304859;304860 241260;241261;241262;241263;241264;241265;241266;241267;241268;241269;241270;241271;241272;241273;241274;241275;241276;241277;241278;241279;241280;241281;241282;241283;241284;241285;241286 241261 23 MVVESVER Unmodified 947.47462 0.47461667 2570 Q15742 NAB2 NGFI-A-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 31.866 31.983 2 0.016804 34658 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 66.682 44.06 48934000 0 0 0 6266400 0 8498500 0 7036400 0 0 15694000 0 11438000 0 0 36595 2570 32668 304861;304862;304863;304864;304865;304866 241287;241288;241289;241290;241291;241292 241290 6 MVVLSLPR Oxidation (M) 929.53682 0.536823 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 2 66.253 66.439 2 0.0069857 75819 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 79.116 69.366 92982000 0 0 0 0 5187700 10212000 6851500 7416100 5331500 7190300 7095300 11735000 7081600 6281000 18601000 36596 2392 32669 304867;304868;304869;304870;304871;304872;304873;304874;304875;304876;304877;304878 241293;241294;241295;241296;241297;241298;241299;241300;241301;241302;241303;241304 241299 3913 12 MVVLSLPR Unmodified 913.54191 0.54190838 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.625 75.686 2 0.0074646 87352 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 89.55 65.578 156800000 0 0 0 8546600 8127100 14637000 8976300 13867000 5958800 10856000 12426000 16679000 8724600 20065000 27941000 36597 2392 32669 304879;304880;304881;304882;304883;304884;304885;304886;304887;304888;304889;304890 241305;241306;241307;241308;241309;241310;241311;241312;241313 241306 8 MVVPAALK Unmodified 827.4939 0.49389555 1415 P40429;Q6NVV1 RPL13A;RPL13AP3 60S ribosomal protein L13a;Putative 60S ribosomal protein L13a protein RPL13AP3 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 54.785 54.92 2 0.04249 60822 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.59 29.242 82972000 0 0 0 4704000 5907500 4082400 4220900 4660100 4768300 7722700 7120900 10690000 11391000 7234800 10469000 36598 1415 32670 304891;304892;304893;304894;304895;304896;304897;304898;304899;304900;304901;304902 241314;241315 241314 2 MVVPEDQSK Oxidation (M) 1047.4907 0.49066067 2433 Q14686 NCOA6 Nuclear receptor coactivator 6 yes yes 0 1 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 14.112 14.207 2 0.03017 13139 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 43.124 18.229 6555800 0 0 0 0 0 3346700 0 1474800 1734400 0 0 0 0 0 0 36599 2433 32671 304903;304904;304905 241316;241317 241316 2 MVVPGLDGAQIPR Unmodified 1351.7282 0.7282056 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.397 79.458 2 0.00018777 91726 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 102.06 73.335 310890000 0 0 0 6687800 11834000 37789000 10682000 18388000 9030800 26006000 31858000 31799000 16874000 35670000 74273000 36600 1565 32672 304906;304907;304908;304909;304910;304911;304912;304913;304914;304915;304916;304917 241318;241319;241320;241321;241322;241323;241324;241325;241326;241327;241328;241329;241330 241318 13 MVVPGLDGAQIPR Oxidation (M) 1367.7231 0.72312022 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 71.751 71.849 2 0.0026653 82522 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 51.268 37.575 228690000 0 0 0 0 18223000 0 28661000 16723000 0 44480000 45355000 48280000 26971000 0 0 36601 1565 32672 304918;304919;304920;304921;304922;304923;304924 241331;241332;241333;241334;241335;241336 241333 2499 6 MVVPGLDGAQIPRDPSQQELPR Oxidation (M) 2418.2325 0.23254249 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 75.299 75.318 3 4.1829E-10 86870 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 65.25 52.212 865490000 0 0 0 17865000 30790000 167800000 45592000 66445000 0 146290000 118130000 0 52089000 0 220490000 36602 1565 32673 304925;304926;304927;304928;304929;304930;304931;304932;304933 241337;241338;241339;241340;241341;241342;241343;241344;241345 241338 2499 9 MVVPGLDGAQIPRDPSQQELPR Unmodified 2402.2376 0.23762787 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.628 79.732 3 1.5769E-20 92129 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 89.668 81.481 222360000 0 0 0 0 2971900 16307000 3355100 10010000 5917200 18836000 16311000 17954000 6468200 10648000 113580000 36603 1565 32673 304934;304935;304936;304937;304938;304939;304940;304941;304942;304943;304944 241346;241347;241348;241349;241350;241351;241352;241353;241354;241355;241356 241347 11 MVVPVAALFTPLK Unmodified 1384.8152 0.81522969 2536 Q15436 SEC23A Protein transport protein Sec23A yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 97.266 97.285 2 0.0052313 112760 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.542 52.873 4690500 0 0 0 0 2031900 0 0 0 0 0 0 0 0 0 2658600 36604 2536 32674 304945;304946 241357 241357 1 MVVPVAALFTPLK Oxidation (M) 1400.8101 0.81014431 2536 Q15436 SEC23A Protein transport protein Sec23A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 93.443 93.554 2 0.0059196 108727 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 44.203 38.862 8419500 0 0 0 0 0 1917400 0 0 0 0 2502300 2421700 0 1578200 0 36605 2536 32674 304947;304948;304949;304950 241358;241359 241358 4173 2 MVVSFNR Oxidation (M) 867.42727 0.42727255 1518;2321 P46940;Q13576 IQGAP1;IQGAP2 Ras GTPase-activating-like protein IQGAP1;Ras GTPase-activating-like protein IQGAP2 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 2 1 1 33.143 33.295 2 0.011293 36930 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 114.54 99.1 216340000 0 0 0 25809000 14443000 25267000 18488000 9259900 10203000 24264000 29901000 0 32474000 11087000 15149000 36606 1518;2321 32675 304951;304952;304953;304954;304955;304956;304957;304958;304959;304960;304961;304962 241360;241361;241362;241363;241364;241365;241366;241367 241367 2407 8 MVVSFNR Unmodified 851.43236 0.43235793 1518;2321 P46940;Q13576 IQGAP1;IQGAP2 Ras GTPase-activating-like protein IQGAP1;Ras GTPase-activating-like protein IQGAP2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 46.942 47.217 2 0.025135 52997 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 81.381 68.174 160580000 0 0 0 0 0 0 28569000 24261000 0 34777000 0 50432000 0 22543000 0 36607 1518;2321 32675 304963;304964;304965;304966;304967;304968 241368;241369;241370 241368 3 MVWVDLEMTGLDIEK Unmodified 1777.863 0.8630441 5153 Q9Y3B8 REXO2 Oligoribonuclease, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 98.319 90.189 2 6.2967E-10 116398 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.85 97.854 16876000 16876000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36608 5153 32676 304969 241371 241371 1 MVYYLDPSSQK Unmodified 1329.6275 0.6274885 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 61.41 60.069 2 7.4338E-05 68716 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 129.38 122 3490800000 8391000 240920000 2189300 4171700 7334600 7586100 150530000 251090000 161210000 564100000 901000000 1169600000 3072400 4227100 15420000 36609 4226 32677 304970;304971;304972;304973;304974;304975;304976;304977;304978;304979;304980;304981;304982;304983;304984;304985 241372;241373;241374;241375;241376;241377;241378;241379;241380;241381;241382;241383;241384;241385;241386;241387;241388;241389;241390;241391 241384 18 MVYYLDPSSQK Oxidation (M) 1345.6224 0.62240312 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.08 2.5 2 1 22 1 2 1 3 2 2 3 1 5 5 53.71 53.23 2 4.0245E-29 57588 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 177.7 168.79 3132500000 6232100 187780000 0 0 0 5867700 173990000 199160000 200680000 438610000 654000000 1266200000 0 0 0 36610 4226 32677 304986;304987;304988;304989;304990;304991;304992;304993;304994;304995;304996;304997;304998;304999;305000;305001;305002;305003;305004;305005;305006;305007;305008;305009;305010 241392;241393;241394;241395;241396;241397;241398;241399;241400;241401;241402;241403;241404;241405;241406;241407;241408;241409;241410;241411;241412;241413;241414;241415;241416;241417;241418;241419;241420;241421;241422;241423;241424;241425 241401 5702 32 MVYYLDPSSQKR Unmodified 1485.7286 0.72859953 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 50.753 51.19 3 0.00088633 57133 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 62.258 48.229 117650000 0 0 0 0 0 0 0 0 0 21567000 15153000 80927000 0 0 0 36611 4226 32678 305011;305012;305013 241426;241427;241428 241428 3 MVYYLDPSSQKR Oxidation (M) 1501.7235 0.72351415 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 10 0 4 1 1 2 42.812 43.24 2;3 0.00052046 47604 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 63.944 52.33 132600000 0 0 0 0 0 0 12648000 0 10890000 0 0 109060000 0 0 0 36612 4226 32678 305014;305015;305016;305017 241429;241430 241429 5702 2 MWDLSSNQAIQIAQHDAPVK Oxidation (M) 2267.1005 0.10046569 1981 P78406 RAE1 mRNA export factor yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 83.294 79.677 3 0.00020829 96624 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 48.848 39.801 33017000 0 31023000 1993600 0 0 0 0 0 0 0 0 0 0 0 0 36613 1981 32679 305018;305019 241431;241432 241432 3200 2 MWDLSSNQAIQIAQHDAPVK Unmodified 2251.1056 0.10555106 1981 P78406 RAE1 mRNA export factor yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 87.175 82.367 3 0.00019283 102326 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 50.883 38.58 14258000 0 14258000 0 0 0 0 0 0 0 0 0 0 0 0 0 36614 1981 32679 305020;305021 241433;241434 241433 2 MWDPHNDPNAQGDAFK Unmodified 1841.7791 0.77913155 868 P08621 SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52.166 51.092 3 3.8972E-05 57505 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 56.339 50.624 991350000 16895000 144720000 11744000 39542000 25135000 51655000 39382000 54536000 59038000 85098000 77982000 105570000 56226000 80748000 143080000 36615 868 32680 305022;305023;305024;305025;305026;305027;305028;305029;305030;305031;305032;305033;305034;305035;305036 241435;241436;241437;241438;241439;241440;241441;241442;241443;241444;241445;241446;241447;241448 241444 14 MWDPHNDPNAQGDAFK Oxidation (M) 1857.774 0.77404617 868 P08621 SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.43 2.06 1 13 1 1 1 1 1 2 1 2 1 2 1 44.446 44.307 3 2.2756E-29 48513 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 142.1 140.18 413050000 0 49175000 0 0 9202900 0 39351000 29379000 30058000 47700000 24971000 69624000 29908000 46381000 37296000 36616 868 32680 305037;305038;305039;305040;305041;305042;305043;305044;305045;305046;305047;305048;305049;305050 241449;241450;241451;241452;241453;241454;241455;241456;241457;241458;241459;241460;241461;241462;241463;241464;241465;241466;241467;241468;241469;241470;241471 241455 1113 22 MWEVLESTTQTK Unmodified 1451.6966 0.6966307 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 73.983 72.519 2 4.2311E-24 90477 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 205.18 194.01 203290000 0 188430000 0 0 0 4900700 0 0 0 0 0 0 0 0 9960900 36617 2047 32681 305051;305052;305053;305054 241472;241473;241474 241473 3 MWEVLESTTQTK Oxidation (M) 1467.6915 0.69154532 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 1 0 By MS/MS By MS/MS 2.33 0.471 4 2 4 2 67.554 62.765 2 0.003206 77702 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 79.974 72.768 145100000 0 139330000 5774700 0 0 0 0 0 0 0 0 0 0 0 0 36618 2047 32681 305055;305056;305057;305058;305059;305060 241475;241476;241477;241478;241479;241480;241481 241481 3329 7 MWEVQTGYCVK Oxidation (M) 1415.6214 0.62135726 1471 P43034 PAFAH1B1 Platelet-activating factor acetylhydrolase IB subunit alpha yes yes 0 1 0 By MS/MS 2 0 1 1 65.67 59.753 2 4.5879E-05 76407 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.62 99.803 39451000 0 39451000 0 0 0 0 0 0 0 0 0 0 0 0 0 36619 1471 32682 305061 241482 241482 2310 1 MWEVQTGYCVK Unmodified 1399.6264 0.62644264 1471 P43034 PAFAH1B1 Platelet-activating factor acetylhydrolase IB subunit alpha yes yes 0 0 0 By MS/MS 2 0 1 1 72.97 67.426 2 0.00046085 85272 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.55 87.917 59475000 0 59475000 0 0 0 0 0 0 0 0 0 0 0 0 0 36620 1471 32682 305062 241483 241483 1 MWGTSPEDK Unmodified 1049.4488 0.44879585 4405 Q9H4Z3 PCIF1 Phosphorylated CTD-interacting factor 1 yes yes 0 0 0 By MS/MS 2 0 1 1 35.713 30.865 2 0.0083515 40465 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.37 68.239 15793000 0 15793000 0 0 0 0 0 0 0 0 0 0 0 0 0 36621 4405 32683 305063 241484 241484 1 MWINPCAQVIFDSDPAPK Oxidation (M) 2103.9758 0.97578244 3366 Q8N7H5 PAF1 RNA polymerase II-associated factor 1 homolog yes yes 0 1 0 By MS/MS 2 0 1 1 90.366 85.47 2 6.3994E-36 106186 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.31 115.11 32677000 0 32677000 0 0 0 0 0 0 0 0 0 0 0 0 0 36622 3366 32684 305064 241485 241485 4943 1 MWINPCAQVIFDSDPAPK Unmodified 2087.9809 0.98086782 3366 Q8N7H5 PAF1 RNA polymerase II-associated factor 1 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 94.031 89.135 2 1.6831E-13 110657 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.02 114.25 35252000 0 35252000 0 0 0 0 0 0 0 0 0 0 0 0 0 36623 3366 32684 305065 241486 241486 1 MWITNGGK Unmodified 905.44292 0.44292261 944 P11310 ACADM Medium-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 48.457 40.742 2 0.013016 56738 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.418 75.399 30710000 30710000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36624 944 32685 305066 241487;241488 241488 2 MWNDLSEK Unmodified 1021.4539 0.45388123 1053 P17480 UBTF Nucleolar transcription factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.071 43.246 2 0.0060247 47930 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 104.37 83.667 213020000 0 0 0 12174000 10312000 22236000 12117000 12151000 7406600 17257000 21170000 40884000 14771000 17969000 24571000 36625 1053 32686 305067;305068;305069;305070;305071;305072;305073;305074;305075;305076;305077;305078 241489;241490;241491;241492;241493;241494;241495;241496;241497;241498;241499;241500;241501;241502;241503 241500 15 MWNVVQSNNGIK Unmodified 1388.6871 0.68706906 5192 Q9Y4B6 VPRBP Protein VPRBP yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 68.721 61.621 2 0.0030701 82005 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.95 68.181 23013000 7175300 15837000 0 0 0 0 0 0 0 0 0 0 0 0 0 36626 5192 32687 305079;305080 241504 241504 1 MWVFSNLR Oxidation (M) 1067.5222 0.52223557 703 O95867 LY6G6C Lymphocyte antigen 6 complex locus protein G6c yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 76.66 76.506 2 0.010155 88218 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 68.915 54.139 7441100 0 0 0 3376300 0 0 0 4064800 0 0 0 0 0 0 0 36627 703 32688 305081;305082 241505;241506 241505 846 2 MWVQLLIPR Oxidation (M) 1170.6583 0.65833512 1844 P61289 PSME3 Proteasome activator complex subunit 3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 87.404 87.508 2 0.0024928 101142 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.942 74.428 6797300 0 0 0 0 0 1493100 0 0 0 0 0 0 0 1229000 4075100 36628 1844 32689 305083;305084;305085 241507;241508;241509;241510 241510 2997 4 MYAALGDPK Oxidation (M) 980.46372 0.46371763 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 6.25 3.77 3 3 6 2 4 1 1 1 1 1 1 32.384 30.04 2 0.0051302 31809 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.501 55.869 334150000 4688400 214910000 0 10239000 0 16416000 0 0 0 14446000 19735000 24858000 0 0 28855000 36629 1986 32690 305086;305087;305088;305089;305090;305091;305092;305093;305094;305095;305096;305097 241511;241512;241513;241514;241515;241516;241517 241514 3226 6 MYAALGDPK Unmodified 964.4688 0.46880301 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS 8.6 2.8 1 4 1 1 1 1 1 40.987 40.034 2 0.022199 48751 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 73.248 43.91 193190000 0 5184700 0 28019000 30185000 0 0 0 0 0 0 0 0 53038000 76764000 36630 1986 32690 305098;305099;305100;305101;305102 241518;241519;241520 241519 2 MYAPAWVAPEALQK Oxidation (M) 1589.7912 0.79119978 2284 Q13418 ILK Integrin-linked protein kinase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.066 78.125 2 2.9001E-05 90584 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 84.658 80.412 130220000 0 0 0 8834100 8466800 16827000 10469000 6968600 6210600 14347000 11061000 12564000 9575600 9746300 15147000 36631 2284 32691 305103;305104;305105;305106;305107;305108;305109;305110;305111;305112;305113;305114 241521;241522;241523;241524;241525;241526;241527;241528;241529;241530;241531;241532;241533 241532 3719 12 MYATIYELK Oxidation (M) 1146.5631 0.56309733 1990 P80188 LCN2 Neutrophil gelatinase-associated lipocalin yes yes 0 1 0 By MS/MS By matching 10 0 2 1 1 62.363 62.107 2 0.030878 72167 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 42.869 24.545 5293200 0 0 0 3013900 0 0 0 0 0 0 0 0 2279400 0 0 36632 1990 32692 305115;305116 241534 241534 1 MYATIYELK Unmodified 1130.5682 0.56818271 1990 P80188 LCN2 Neutrophil gelatinase-associated lipocalin yes yes 0 0 0 By MS/MS 10 0 1 1 70.892 70.266 2 0.014237 81374 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 58.596 20.463 3420300 0 0 0 3420300 0 0 0 0 0 0 0 0 0 0 0 36633 1990 32692 305117 241535 241535 1 MYCNPDAMSSLTEK Unmodified 1645.6786 0.67861415 3453 Q8NG31 CASC5 Protein CASC5 yes yes 0 0 0 By MS/MS 2 0 1 1 63.692 57.784 2 0.001123 74098 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.215 91.649 14123000 0 14123000 0 0 0 0 0 0 0 0 0 0 0 0 0 36634 3453 32693 305118 241536 241536 1 MYEEFLSK Unmodified 1045.479 0.47903335 927;1299 P10644;P31321 PRKAR1A;PRKAR1B cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed;cAMP-dependent protein kinase type I-beta regulatory subunit no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 59.538 57.894 2 0.012186 66070 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 75.213 57.919 583100000 23897000 427720000 10825000 0 5543700 12322000 7533600 9838800 0 10310000 14908000 0 9937500 13241000 37019000 36635 927;1299 32694 305119;305120;305121;305122;305123;305124;305125;305126;305127;305128;305129;305130;305131 241537;241538;241539;241540;241541;241542;241543;241544;241545;241546;241547;241548;241549;241550 241537 14 MYEEFLSK Oxidation (M) 1061.4739 0.47394797 927;1299 P10644;P31321 PRKAR1A;PRKAR1B cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed;cAMP-dependent protein kinase type I-beta regulatory subunit no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 7.33 3.77 3 6 1 1 1 1 1 1 1 1 1 50.646 48.73 2 0.010172 62125 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.46 81.499 274830000 7029200 215340000 8966900 4569400 0 8654800 6241900 0 6610300 0 0 11949000 0 5467300 0 36636 927;1299 32694 305132;305133;305134;305135;305136;305137;305138;305139;305140 241551;241552;241553 241553 1191 3 MYEEHLK Oxidation (M) 964.43242 0.43241751 2013 P84090 ERH Enhancer of rudimentary homolog yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 2 2 2 2 2 2 2 2 2 1 1 12.491 12.641 2 0.017138 12459 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 79.597 32.795 117700000 0 0 0 3969500 9706100 8196600 9943400 7095700 7460700 7433300 12415000 17336000 21448000 7038200 5660700 36637 2013 32695 305141;305142;305143;305144;305145;305146;305147;305148;305149;305150;305151;305152;305153;305154;305155;305156;305157;305158;305159;305160;305161 241554;241555;241556;241557;241558;241559;241560;241561;241562;241563 241561 3267 10 MYEEHLK Unmodified 948.4375 0.43750288 2013 P84090 ERH Enhancer of rudimentary homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 18.977 18.316 2 0.018259 18400 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 118.69 59.077 330640000 0 50525000 132930000 0 0 0 0 0 0 0 20090000 28451000 24286000 24677000 49685000 36638 2013 32695 305162;305163;305164;305165;305166;305167;305168 241564;241565;241566;241567;241568;241569;241570 241569 6 MYENQQLGK Unmodified 1109.5175 0.51754412 2295 Q13459 MYO9B Unconventional myosin-IXb yes yes 0 0 0 By MS/MS 2 0 1 1 26.202 21.942 2 0.0076083 28943 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.458 83.683 16574000 0 16574000 0 0 0 0 0 0 0 0 0 0 0 0 0 36639 2295 32696 305169 241571 241571 1 MYERMYAALGDPK Oxidation (M) 1559.7112 0.7112349 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 1 1 By MS/MS 2 0 2 2 62.651 54.39 3 0.011671 73766 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.774 36.512 88591000 88591000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36640 1986 32697 305170;305171 241572;241573 241572 3226;3227 1 MYERMYAALGDPK Unmodified 1543.7163 0.71632028 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 1 By MS/MS 2 0 2 2 69.522 61.232 3 0.006513 81794 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.754 41.371 96671000 96671000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36641 1986 32697 305172;305173 241574;241575 241574 2 MYFPDVEFDIK Unmodified 1402.6479 0.64788959 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 94.987 88.49 2 0.0049207 112304 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.662 66.911 15113000 4973700 10140000 0 0 0 0 0 0 0 0 0 0 0 0 0 36642 2172 32698 305174;305175 241576;241577 241577 2 MYGCTEAFLADAK Unmodified 1475.6425 0.64248664 5005 Q9ULU4 ZMYND8 Protein kinase C-binding protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 75.811 70.871 2 0.0039986 88689 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.701 77.403 34835000 0 34835000 0 0 0 0 0 0 0 0 0 0 0 0 0 36643 5005 32699 305176 241578 241578 1 MYGDLDVLFLTDEYDTVLAYENK Unmodified 2726.2673 0.26731582 3367 Q8N806 UBR7 Putative E3 ubiquitin-protein ligase UBR7 yes yes 0 0 0 By MS/MS 2 0 1 1 101.33 93.198 3 6.4321E-07 120010 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.369 62.768 5502000 5502000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36644 3367 32700 305177 241579 241579 1 MYGISLCQAILDETK Oxidation (M) 1756.8376 0.83755763 773 P04083 ANXA1 Annexin A1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.29 2.76 5 1 1 2 3 1 1 89.787 85.88 2;3 1.854E-90 107318 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 209.19 184.33 452940000 159310000 262710000 23325000 0 0 0 0 0 0 0 0 0 0 0 7600700 36645 773 32701 305178;305179;305180;305181;305182;305183;305184 241580;241581;241582;241583;241584;241585;241586;241587;241588 241580 928 8 MYGISLCQAILDETK Unmodified 1740.8426 0.84264301 773 P04083 ANXA1 Annexin A1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.22 0.416 7 2 2 5 2 92.938 88.464 2;3 2.2876E-45 111711 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 199.82 171.13 620030000 238060000 369080000 12888000 0 0 0 0 0 0 0 0 0 0 0 0 36646 773 32701 305185;305186;305187;305188;305189;305190;305191;305192;305193 241589;241590;241591;241592;241593;241594;241595;241596 241595 7 MYGRNELIAR Unmodified 1221.6288 0.6288259 1235 P28347;Q15561;Q99594;Q15562 TEAD1;TEAD4;TEAD3;TEAD2 Transcriptional enhancer factor TEF-1;Transcriptional enhancer factor TEF-3;Transcriptional enhancer factor TEF-5;Transcriptional enhancer factor TEF-4 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 37.415 37.597 3 0.0034407 41649 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 57.174 46.073 197770000 0 0 0 11044000 8209200 14884000 10839000 15701000 10015000 0 23267000 33358000 21126000 16193000 33134000 36647 1235 32702 305194;305195;305196;305197;305198;305199;305200;305201;305202;305203;305204 241597;241598;241599 241598 2 MYHDDDLADLVFPSSATADTSIFAGQNDPLK Oxidation (M) 3369.5347 0.53471691 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 2 3 1 97.212 92.787 3 4.2772E-104 115579 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 134.67 131.91 169120000 114580000 45786000 8753800 0 0 0 0 0 0 0 0 0 0 0 0 36648 1226 32703 305205;305206;305207;305208;305209;305210 241600;241601;241602;241603;241604;241605;241606;241607 241606 1812 8 MYHDDDLADLVFPSSATADTSIFAGQNDPLK Unmodified 3353.5398 0.53980229 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 0 0 By MS/MS 2 0 1 1 98.018 89.888 3 6.8148E-91 115995 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 128.85 126.48 118590000 118590000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36649 1226 32703 305211 241608 241608 1 MYHNSSQK Acetyl (Protein N-term) 1035.4444 0.44437918 1675 P51946 CCNH Cyclin-H yes yes 1 0 0 By MS/MS 2 0 1 1 12.851 9.5561 2 0.039983 13087 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.227 62.096 29492000 0 29492000 0 0 0 0 0 0 0 0 0 0 0 0 0 36650 1675 32704 305212 241609 241609 0 MYLGYEYVTAIR Oxidation (M) 1493.7225 0.72245152 763 P02787 TF Serotransferrin yes yes 0 1 0 By MS/MS 10 0 1 1 78.705 78.894 2 0.00018126 91113 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 83 65.18 13517000 0 0 0 0 0 0 0 13517000 0 0 0 0 0 0 0 36651 763 32705 305213 241610 241610 918 1 MYLMLDNK Unmodified 1026.4878 0.48782389 1448 P42224 STAT1 Signal transducer and activator of transcription 1-alpha/beta yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 73.254 66.325 2 0.012091 87480 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 100.19 77.169 33072000 10061000 23010000 0 0 0 0 0 0 0 0 0 0 0 0 0 36652 1448 32706 305214;305215 241611 241611 1 MYLSNNPNSHTDNNAK Oxidation (M) 1834.7904 0.79042452 812 P05549 TFAP2A Transcription factor AP-2-alpha yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 19.192 16.104 3 0.0013418 21225 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 55.755 48.346 10149000 0 9218900 930040 0 0 0 0 0 0 0 0 0 0 0 0 36653 812 32707 305216;305217 241612 241612 974 1 MYLSNNPNSHTDNNAK Unmodified 1818.7955 0.79550989 812 P05549 TFAP2A Transcription factor AP-2-alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 25.962 22.905 3 0.00013236 30467 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.842 61.465 63279000 24064000 29441000 0 0 0 0 0 0 0 0 0 0 0 0 9773200 36654 812 32707 305218;305219;305220 241613;241614;241615 241613 2 MYLTPSEK Unmodified 967.46847 0.46846866 3050 Q7L576;Q96F07 CYFIP1;CYFIP2 Cytoplasmic FMR1-interacting protein 1;Cytoplasmic FMR1-interacting protein 2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 35.729 35.947 2 0.040502 39965 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 79.451 41.249 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36655 3050 32708 305221;305222;305223;305224 241616;241617;241618;241619 241616 4 MYNAYGLITAEDRR Oxidation (M) 1687.7988 0.79880436 3061 Q7LBC6 KDM3B Lysine-specific demethylase 3B yes yes 0 1 1 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 15 1 1 1 1 2 1 2 1 1 1 2 1 63.961 64.068 3 9.7948E-05 72992 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 71.548 67.488 137690000 0 0 0 4484800 4845500 10096000 7135200 16308000 8227200 22764000 9988200 13809000 7564400 18145000 14324000 36656 3061 32709 305225;305226;305227;305228;305229;305230;305231;305232;305233;305234;305235;305236;305237;305238;305239 241620;241621;241622;241623;241624;241625;241626;241627 241621 4683 5 MYNAYGLITAEDRR Unmodified 1671.8039 0.80388973 3061 Q7LBC6 KDM3B Lysine-specific demethylase 3B yes yes 0 0 1 By MS/MS 10 0 1 1 70.001 69.97 3 0.002943 80405 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 32.275 20.584 8621400 0 0 0 0 0 8621400 0 0 0 0 0 0 0 0 0 36657 3061 32709 305240 241628 241628 1 MYNAYGLITPEDRK Unmodified 1669.8134 0.81339179 5193 Q9Y4C1 KDM3A Lysine-specific demethylase 3A yes yes 0 0 1 By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 64.762 64.997 3 0.011793 73574 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 30.961 23.609 53665000 0 0 0 0 0 5946000 0 6046500 2651600 4696400 4142900 9547500 3881900 4432300 12320000 36658 5193 32710 305241;305242;305243;305244;305245;305246;305247;305248;305249 241629;241630;241631;241632 241630 4 MYNGIGLPTPR Acetyl (Protein N-term);Oxidation (M) 1275.6282 0.6281572 5066 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 78.141 78.341 2 0.0015613 90258 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 48.091 40.611 11670000 0 0 0 0 0 0 2765400 0 2076500 0 0 0 0 0 6827700 36659 5066 32711 305250;305251;305252 241633 241633 6425 1 MYNLVSR Unmodified 881.44292 0.44292261 2328 Q13616 CUL1 Cullin-1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 42.636 42.986 2 0.04445 48358 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.799 21.826 39116000 0 0 0 0 0 9835700 0 0 0 0 0 0 4845200 5183600 19252000 36660 2328 32712 305253;305254;305255;305256 241634 241634 1 MYPIDFEK Oxidation (M) 1057.479 0.47903335 1137 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.43 3.14 5 1 24 1 3 2 2 2 2 2 2 2 2 2 2 2 2 2 59.945 58.954 2 0.0085899 66877 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.26 67.95 1931500000 19093000 1558500000 60518000 11718000 8226800 20538000 19734000 11935000 12918000 23789000 37850000 34725000 23901000 28488000 59570000 36661 1137 32713 305257;305258;305259;305260;305261;305262;305263;305264;305265;305266;305267;305268;305269;305270;305271;305272;305273;305274;305275;305276;305277;305278;305279;305280;305281;305282;305283;305284;305285;305286 241635;241636;241637;241638;241639;241640;241641;241642;241643;241644;241645;241646;241647;241648 241639 1634 13 MYPIDFEK Unmodified 1041.4841 0.48411873 1137 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.031 68.112 2 0.012605 78573 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 74.255 66.024 317480000 0 0 0 8303800 5796700 21789000 11400000 15577000 7587500 24846000 38446000 36415000 13756000 36824000 96741000 36662 1137 32713 305287;305288;305289;305290;305291;305292;305293;305294;305295;305296;305297;305298 241649;241650;241651;241652;241653 241652 5 MYSDAFLNDSYLK Oxidation (M) 1581.7021 0.70211 3326;3563 Q8N3U4;Q8WVM7 STAG2;STAG1 Cohesin subunit SA-2;Cohesin subunit SA-1 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 78.652 77.98 2 8.6479E-22 95955 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 146.17 136.68 175270000 0 97600000 3632000 0 4066800 9630600 4148500 4404100 4470800 9213900 7810100 9181400 4869500 6758900 9480300 36663 3326;3563 32714 305299;305300;305301;305302;305303;305304;305305;305306;305307;305308;305309;305310;305311;305312 241654;241655;241656;241657;241658;241659;241660;241661;241662;241663;241664;241665;241666;241667 241657 4920 14 MYSDAFLNDSYLK Unmodified 1565.7072 0.70719538 3326;3563 Q8N3U4;Q8WVM7 STAG2;STAG1 Cohesin subunit SA-2;Cohesin subunit SA-1 no no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.12 3.72 2 1 5 2 1 1 1 1 1 1 81.909 80.681 2 6.5537E-34 99712 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 176.48 157.16 263970000 0 240350000 2225400 0 0 2016900 0 0 0 4453000 1998100 0 0 3109700 9816200 36664 3326;3563 32714 305313;305314;305315;305316;305317;305318;305319;305320 241668;241669;241670;241671;241672;241673 241669 6 MYSEIDIK Unmodified 997.47903 0.47903335 2481 Q15029 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52.437 51.33 2 0.025168 58975 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 58.917 20.081 646500000 8276400 348020000 2145700 0 10768000 22312000 13984000 18644000 14321000 22776000 28705000 38416000 37907000 28187000 52037000 36665 2481 32715 305321;305322;305323;305324;305325;305326;305327;305328;305329;305330;305331;305332;305333;305334 241674;241675;241676;241677;241678;241679 241679 6 MYSEIDIK Oxidation (M) 1013.4739 0.47394797 2481 Q15029 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 0 1 0 By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 8.5 3.01 1 1 8 1 1 1 1 1 1 1 1 1 1 44.076 43.065 2 0.018403 47438 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.047 22.342 208060000 581240 116610000 0 8047500 8641900 0 11154000 6987000 8077800 0 20394000 17140000 10428000 0 0 36666 2481 32715 305335;305336;305337;305338;305339;305340;305341;305342;305343;305344 241680;241681;241682 241682 4090 3 MYSFDDVLEEGK Oxidation (M) 1447.6177 0.61771167 3573 Q8WWI1 LMO7 LIM domain only protein 7 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 2 1 2 2 2 2 1 2 1 1 1 76.218 76.307 2 1.8128E-07 87129 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 117.67 113.37 109960000 0 0 0 4873800 5057500 6734900 11098000 11790000 10408000 14990000 6376400 21696000 5638900 4403800 6890100 36667 3573 32716 305345;305346;305347;305348;305349;305350;305351;305352;305353;305354;305355;305356;305357;305358;305359;305360;305361;305362 241683;241684;241685;241686;241687;241688;241689;241690;241691;241692;241693;241694;241695;241696 241691 5064 12 MYSFDDVLEEGK Unmodified 1431.6228 0.62279705 3573 Q8WWI1 LMO7 LIM domain only protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.135 80.193 2 3.3498E-08 92397 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 125.75 120.81 68724000 0 0 0 2307500 1865500 3953600 3385200 5236800 3818000 6923900 6580700 7262000 4079300 5987500 17324000 36668 3573 32716 305363;305364;305365;305366;305367;305368;305369;305370;305371;305372;305373;305374 241697;241698;241699;241700;241701;241702;241703;241704;241705;241706;241707 241700 11 MYSIEPADRFK Oxidation (M) 1371.6493 0.64928657 3 A0AVT1 UBA6 Ubiquitin-like modifier-activating enzyme 6 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 55.419 49.45 3 0.0083479 61508 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 59.542 53.394 69011000 30411000 23332000 15267000 0 0 0 0 0 0 0 0 0 0 0 0 36669 3 32717 305375;305376;305377 241708;241709;241710 241710 7 2 MYSIEPADRFK Unmodified 1355.6544 0.65437195 3 A0AVT1 UBA6 Ubiquitin-like modifier-activating enzyme 6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 6.8 3.92 4 6 2 1 1 1 1 1 1 1 1 58.277 55.816 2;3 0.0032017 76616 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.536 55.028 217920000 126270000 48044000 9023800 0 0 3825200 0 2514900 2694400 0 6628200 0 0 4721700 14199000 36670 3 32717 305378;305379;305380;305381;305382;305383;305384;305385;305386;305387 241711;241712;241713;241714;241715;241716;241717;241718 241716 7 MYSTDDGVQFHAFGR Oxidation (M) 1745.7468 0.74676879 2481 Q15029 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 62.305 62.581 3 2.7059E-06 70506 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.96 80.09 102610000 0 0 0 0 0 12060000 0 10384000 0 0 14965000 19245000 13347000 14326000 18279000 36671 2481 32718 305388;305389;305390;305391;305392;305393;305394 241719;241720;241721;241722;241723;241724;241725 241720 4091 7 MYSTDDGVQFHAFGR Unmodified 1729.7519 0.75185416 2481 Q15029 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 66.934 67.071 3 0.00082862 76056 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.656 51.264 101360000 0 0 0 1572600 0 7241600 3317400 5828000 5652700 8084500 8540900 11312000 4888800 8253000 36668000 36672 2481 32718 305395;305396;305397;305398;305399;305400;305401;305402;305403;305404;305405 241726;241727;241728;241729;241730;241731;241732;241733;241734;241735 241728 10 MYSYPAR Oxidation (M) 902.39564 0.39563807 851 P07910 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 1 2 2 2 1 2 2 2 2 2 23.1 23.31 2 0.033158 24950 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 62.714 52.577 308460000 0 0 0 11048000 8299200 23103000 20685000 19963000 9275000 30980000 32129000 50147000 61556000 41275000 0 36673 851 32719 305406;305407;305408;305409;305410;305411;305412;305413;305414;305415;305416;305417;305418;305419;305420;305421;305422;305423;305424 241736;241737;241738;241739;241740;241741 241739 6 MYSYPAR Unmodified 886.40072 0.40072345 851 P07910 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 29.593 29.819 2 0.023327 32133 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 91.14 74.213 630860000 0 0 0 27725000 26568000 0 0 31615000 25306000 59944000 61306000 80835000 105360000 76071000 136120000 36674 851 32719 305425;305426;305427;305428;305429;305430;305431;305432;305433;305434 241742;241743;241744;241745;241746;241747;241748;241749 241742 8 MYTAIPQSGSPFPGSVQDPGLHVWR Acetyl (Protein N-term);Oxidation (M) 2784.333 0.33298482 1407 P40121 CAPG Macrophage-capping protein yes yes 1 1 0 By MS/MS 10 0 1 1 89.206 89.349 3 2.2555E-06 103436 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.322 38.427 3010000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3010000 36675 1407 32720 305435 241750 241750 2200 1 MYTDIQEPMFSAAR Oxidation (M) 1674.7382 0.73817794 4609 Q9NRR5 UBQLN4 Ubiquilin-4 yes yes 0 1 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 1 2 2 2 2 2 2 2 2 2 70.632 70.759 2 1.0295E-12 82021 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 105.32 95.091 70797000 0 0 0 1304000 2272500 5976400 4859000 6973500 3615000 7949200 8552800 8217800 0 7264100 13813000 36676 4609 32721 305436;305437;305438;305439;305440;305441;305442;305443;305444;305445;305446;305447;305448;305449;305450;305451;305452;305453;305454;305455 241751;241752;241753;241754;241755;241756;241757;241758;241759;241760;241761;241762;241763;241764;241765;241766 241763 6007;6008 15 MYTDIQEPMFSAAR Unmodified 1658.7433 0.74326331 4609 Q9NRR5 UBQLN4 Ubiquilin-4 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.665 76.723 2 6.3716E-19 88116 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 129.82 118.09 76850000 0 0 0 1408800 2323500 3398600 2756600 6695300 3106600 6484900 8000900 8936900 5352600 6887400 21498000 36677 4609 32721 305456;305457;305458;305459;305460;305461;305462;305463;305464;305465;305466;305467 241767;241768;241769;241770;241771;241772;241773;241774;241775;241776 241769 10 MYTDIQEPMFSAAR 2 Oxidation (M) 1690.7331 0.73309256 4609 Q9NRR5 UBQLN4 Ubiquilin-4 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 2 3 1 1 1 2 1 62.857 62.848 2 0.00011126 72934 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 77.379 69.454 37484000 0 0 0 2835500 5465100 0 8303700 3694600 4443400 0 0 0 8949300 3792100 0 36678 4609 32721 305468;305469;305470;305471;305472;305473;305474;305475;305476;305477;305478;305479 241777;241778;241779;241780;241781;241782;241783;241784;241785 241782 6007;6008 9 MYTDIQEPMLNAAQEQFGGNPFASVGSSSSSGEGTQPSR 2 Oxidation (M) 4093.7906 0.79056703 4899 Q9UHD9 UBQLN2 Ubiquilin-2 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 84.574 84.734 4 2.3179E-68 98066 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 75.515 71.519 27511000 0 0 0 0 0 0 0 0 0 11394000 6844900 0 0 0 9271400 36679 4899 32722 305480;305481;305482 241786;241787;241788;241789 241787 6254;6255 4 MYVQTVLDVHK Oxidation (M) 1347.6857 0.68567208 2328 Q13616 CUL1 Cullin-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 59.091 53.108 3 0.0007415 66191 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 83.397 75.292 87554000 39352000 37693000 10509000 0 0 0 0 0 0 0 0 0 0 0 0 36680 2328 32723 305483;305484;305485 241790;241791 241791 3794 2 MYVQTVLDVHK Unmodified 1331.6908 0.69075746 2328 Q13616 CUL1 Cullin-1 yes yes 0 0 0 By MS/MS 2 0 2 2 73.342 65.146 2;3 0.00046576 86335 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 117.89 96.518 75256000 75256000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36681 2328 32723 305486;305487 241792;241793 241792 1 MYVSYLLDK Acetyl (Protein N-term);Oxidation (M) 1188.5737 0.57366201 4039 Q99626 CDX2 Homeobox protein CDX-2 yes yes 1 1 0 By MS/MS By matching By MS/MS 2 0 3 1 1 1 13.551 10.336 2 0.0065002 15396 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.674 23.706 18607000 11862000 4252100 2492800 0 0 0 0 0 0 0 0 0 0 0 0 36682 4039 32724 305488;305489;305490 241794 241794 5545 1 NAADPISGDFK Unmodified 1133.5353 0.53530267 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.261 48.423 2 0.0069562 54500 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 55.249 32.509 174910000 0 0 0 11841000 15024000 11789000 12297000 11294000 10087000 13905000 15269000 21897000 17034000 14464000 20007000 36683 1492 32725 305491;305492;305493;305494;305495;305496;305497;305498;305499;305500;305501;305502 241795;241796;241797;241798 241795 4 NAAEELKPR Unmodified 1026.5458 0.54580778 1981 P78406 RAE1 mRNA export factor yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 16.953 17.125 2 6.201E-05 17039 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 133.23 51.938 148780000 0 0 0 8270100 9692300 5682600 12996000 10249000 7379500 9783300 16443000 29985000 0 13510000 24787000 36684 1981 32726 305503;305504;305505;305506;305507;305508;305509;305510;305511;305512;305513 241799;241800;241801;241802;241803;241804;241805 241799 0 NAAFGQSGGAGSDSNSPGNVQPNSAPSVESHPVLEK Unmodified 3492.6142 0.61418129 4251 Q9BYJ9 YTHDF1 YTH domain-containing family protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 2 1 2 1 1 2 1 2 2 2 2 60.475 60.605 3;4 1.2728E-55 68560 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.598 72.883 220050000 0 0 0 4942500 14006000 5685200 23001000 6955600 10338000 26590000 14179000 25197000 20878000 25160000 43122000 36685 4251 32727 305514;305515;305516;305517;305518;305519;305520;305521;305522;305523;305524;305525;305526;305527;305528;305529;305530;305531;305532 241806;241807;241808;241809;241810;241811;241812;241813;241814;241815;241816;241817;241818;241819;241820 241810 15 NAAGALDLLK Unmodified 984.5604 0.56039521 1149 P23193 TCEA1 Transcription elongation factor A protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 71.682 70.787 2 0.003743 80716 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 75.378 54.858 1943000000 882840 1540600000 30403000 16195000 18018000 21827000 27186000 21019000 21145000 29703000 39653000 41918000 26676000 28439000 79364000 36686 1149 32728 305533;305534;305535;305536;305537;305538;305539;305540;305541;305542;305543;305544;305545;305546;305547;305548 241821;241822;241823;241824;241825;241826;241827;241828;241829;241830;241831;241832;241833;241834;241835 241823 13 NAAHAIQK Unmodified 851.46135 0.46134987 128 O00203 AP3B1 AP-3 complex subunit beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 5.0445 2.0083 2 2.6559E-07 4601 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 189.31 131.85 2411200000 1584200000 740650000 86439000 0 0 0 0 0 0 0 0 0 0 0 0 36687 128 32729 305549;305550;305551;305552 241836;241837;241838;241839 241836 4 NAAHALPTTLGALER Unmodified 1533.8263 0.82633974 3395 Q8NBJ5 COLGALT1 Procollagen galactosyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 66.415 66.637 3 0.0033944 76219 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 42.338 34.967 49249000 0 0 0 0 0 4950600 3180700 3984600 2377000 4366300 8172700 7391700 2785400 0 12040000 36688 3395 32730 305553;305554;305555;305556;305557;305558;305559;305560;305561 241840;241841;241842;241843;241844 241844 5 NAALAPTSWHQR Unmodified 1350.6793 0.67928157 457 O75128 COBL Protein cordon-bleu yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 40.577 40.746 3 0.012709 44706 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 40.725 16.874 62925000 0 0 0 4079700 3852800 4975600 4550900 0 5348400 8053900 8019400 9365100 6626400 0 8052600 36689 457 32731 305562;305563;305564;305565;305566;305567;305568;305569;305570;305571 241845;241846 241846 2 NAALDAQSAEDQTGLLTVK Unmodified 1943.98 0.97999942 3718 Q969J2 ZKSCAN4 Zinc finger protein with KRAB and SCAN domains 4 yes yes 0 0 0 By MS/MS 2 0 1 1 76.955 72.118 2 2.0937E-64 90133 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 142.45 129.44 18763000 0 18763000 0 0 0 0 0 0 0 0 0 0 0 0 0 36690 3718 32732 305572 241847 241847 1 NAALDVEPIHAFR Unmodified 1451.7521 0.75211216 4606 Q9NRL3 STRN4 Striatin-4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.346 71.386 3 0.00027534 82109 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 64.65 55.921 60869000 0 0 0 4115900 3409100 6226200 4557200 6005100 3703800 7412400 5100700 9908700 4390500 6039500 0 36691 4606 32733 305573;305574;305575;305576;305577;305578;305579;305580;305581;305582;305583;305584 241848;241849;241850;241851;241852;241853;241854 241848 7 NAALWEYEVYK Unmodified 1384.6663 0.66631685 1594 P49754 VPS41 Vacuolar protein sorting-associated protein 41 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 79.883 77.309 2 0.0050024 93856 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 91.867 77.66 4347400 0 0 4347400 0 0 0 0 0 0 0 0 0 0 0 0 36692 1594 32734 305585 241855 241855 1 NAAPCAVSYLLFDQNDK Unmodified 1924.8989 0.89891233 536 O75718 CRTAP Cartilage-associated protein yes yes 0 0 0 By MS/MS By matching 2.33 0.471 2 1 2 1 89.357 85.84 2 3.9905E-35 106709 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.76 120.11 90199000 0 88705000 1493900 0 0 0 0 0 0 0 0 0 0 0 0 36693 536 32735 305586;305587;305588 241856;241857 241856 2 NAAQFLLSTNDK Unmodified 1320.6674 0.66737948 1941 P63151 PPP2R2A Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 67.646 66.344 2 9.522E-27 82299 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 215.06 196.75 1976600000 651000000 1027700000 71961000 13544000 12477000 15085000 13639000 11712000 9247800 20381000 33469000 25926000 11244000 15740000 43451000 36694 1941 32736 305589;305590;305591;305592;305593;305594;305595;305596;305597;305598;305599;305600;305601;305602;305603;305604 241858;241859;241860;241861;241862;241863;241864;241865;241866;241867;241868;241869;241870;241871;241872;241873;241874;241875;241876 241871 19 NAAQVLVGIPLETGQK Unmodified 1636.9148 0.91482039 4137 Q9BT78 COPS4 COP9 signalosome complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 82.461 82.523 2;3 2.9267E-23 95637 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 140.14 129.91 401470000 0 0 0 10776000 18849000 30558000 20057000 21591000 12985000 36187000 39038000 38568000 36309000 44791000 91761000 36695 4137 32737 305605;305606;305607;305608;305609;305610;305611;305612;305613;305614;305615;305616;305617;305618;305619;305620;305621;305622;305623;305624;305625;305626;305627;305628 241877;241878;241879;241880;241881;241882;241883;241884;241885;241886;241887;241888 241888 4 NAATEDLWESLENASGK Unmodified 1833.8381 0.83808621 1771 P55786 NPEPPS Puromycin-sensitive aminopeptidase yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 89.742 86.072 2 0.0001416 106827 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.11 89.43 118900000 0 116740000 2164900 0 0 0 0 0 0 0 0 0 0 0 0 36696 1771 32738 305629;305630 241889 241889 1 NAAVFSSVLAL Unmodified 1090.6023 0.60226003 2691 Q504Q3 PAN2 PAB-dependent poly(A)-specific ribonuclease subunit PAN2 yes yes 0 0 0 By MS/MS 2 0 1 1 97.896 93.123 2 0.0027379 115298 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.368 67.857 22906000 0 22906000 0 0 0 0 0 0 0 0 0 0 0 0 0 36697 2691 32739 305631 241890 241890 1 NACLQTSSLAVR Unmodified 1318.6663 0.66633362 2932 Q6P3W7 SCYL2 SCY1-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 47.943 48.184 2 0.00043532 54337 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 79.974 57.333 21229000 0 0 0 0 0 0 0 0 4682300 0 0 0 8933200 7613400 0 36698 2932 32740 305632;305633;305634 241891;241892;241893;241894 241891 4 NACNGDSGGPLVCR Unmodified 1475.6245 0.62454516 1608 P49862 KLK7 Kallikrein-7 yes yes 0 0 0 By MS/MS 10 0 1 1 29.461 29.181 2 7.5468E-08 31829 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 94.363 83.533 6874100 0 0 0 6874100 0 0 0 0 0 0 0 0 0 0 0 36699 1608 32741 305635 241895 241895 1 NADCLAELNEAMR Oxidation (M) 1521.6552 0.65517659 3213 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.597 52.74 2 1.9548E-08 58485 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.03 92.819 212230000 0 0 0 7280700 8521200 15520000 9771500 6591100 13145000 18469000 24249000 42571000 28600000 17172000 20339000 36700 3213 32742 305636;305637;305638;305639;305640;305641;305642;305643;305644;305645;305646;305647 241896;241897;241898;241899;241900;241901;241902;241903;241904;241905;241906;241907 241899 4830 12 NADCLAELNEAMR Unmodified 1505.6603 0.66026196 3213 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.96 71.034 2 9.7527E-05 80976 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 99.522 83.269 127740000 0 0 0 5519500 5532300 8632900 7827200 8519700 5975900 10536000 12407000 13614000 13423000 13328000 22425000 36701 3213 32742 305648;305649;305650;305651;305652;305653;305654;305655;305656;305657;305658;305659 241908;241909;241910;241911;241912;241913;241914;241915;241916;241917;241918 241911 11 NADDDRIPR Unmodified 1070.5105 0.51048491 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 15.324 15.716 2 0.010611 14483 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 146.79 106.72 66110000 0 0 0 0 0 0 0 0 0 0 0 21039000 11665000 0 33406000 36702 2378 32743 305660;305661;305662 241919 241919 1 NADELVK Unmodified 787.40758 0.40758296 1067 P17987 TCP1 T-complex protein 1 subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.22 2.2 1 8 1 1 1 1 1 1 1 1 1 17.283 16.934 2 0.024035 17308 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 83.614 40.896 240560000 0 70759000 0 14430000 11353000 33593000 24760000 16695000 11888000 37586000 0 0 0 0 19498000 36703 1067 32744 305663;305664;305665;305666;305667;305668;305669;305670;305671 241920;241921;241922 241920 3 NADETVLQK Unmodified 1016.5138 0.51383895 3933 Q96N67 DOCK7 Dedicator of cytokinesis protein 7 yes yes 0 0 0 By MS/MS 2 0 1 1 24.397 20.268 2 0.038667 26838 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 61.602 34.298 9547500 0 9547500 0 0 0 0 0 0 0 0 0 0 0 0 0 36704 3933 32745 305672 241923 241923 1 NADGFIDLEEYIGDMYSHDGNTDEPEWVK Unmodified 3358.4248 0.42483211 376 O43852 CALU Calumenin yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 98.886 93.057 3 4.0634E-191 117544 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 202.04 199.68 192230000 192230000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36705 376 32746 305673;305674 241924;241925 241925 2 NADGFIDLEEYIGDMYSHDGNTDEPEWVK Oxidation (M) 3374.4197 0.41974673 376 O43852 CALU Calumenin yes yes 0 1 0 By MS/MS 2 0 1 1 97.421 89.291 3 4.8061E-12 115261 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.295 69.341 35847000 35847000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36706 376 32746 305675 241926 241926 478 1 NADGTICYDSTHYK Unmodified 1643.6886 0.68858521 999 P14550 AKR1A1 Alcohol dehydrogenase [NADP(+)] yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.27 3.52 7 1 3 2 4 2 1 1 1 37.283 33.815 2;3 0.00030513 43983 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.681 72.366 896740000 24731000 820060000 13729000 0 0 0 0 0 0 0 8088700 0 0 4830800 25308000 36707 999 32747 305676;305677;305678;305679;305680;305681;305682;305683;305684;305685;305686 241927;241928;241929;241930;241931;241932 241928 6 NADHSMNYQYR Unmodified 1397.5782 0.5782469 2207 Q12906 ILF3 Interleukin enhancer-binding factor 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.482 22.687 3 0.017808 23720 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 39.625 35.451 58517000 0 0 0 4605000 2346000 4382300 2925400 3139700 3067900 5176500 4532300 7786100 5619000 5660100 9276200 36708 2207 32748 305687;305688;305689;305690;305691;305692;305693;305694;305695;305696;305697;305698 241933 241933 1 NADLNAQTVVK Unmodified 1171.6197 0.619701 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 38.112 37.887 2 7.3295E-11 42466 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 152.97 105.91 629960000 0 22745000 0 33845000 38783000 38858000 49579000 47412000 40598000 50051000 64114000 83518000 46966000 44955000 68530000 36709 5216 32749 305699;305700;305701;305702;305703;305704;305705;305706;305707;305708;305709;305710;305711 241934;241935;241936;241937;241938;241939;241940;241941;241942;241943;241944;241945;241946 241934 13 NADLTDETSR Unmodified 1120.4996 0.49964545 5000 Q9ULM3 YEATS2 YEATS domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 17.641 17.829 2 0.0016584 17446 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 94.309 61.469 89328000 0 0 0 3367600 9044600 7418200 3185000 3122900 3534500 11405000 6132100 19385000 7891300 6887200 7955200 36710 5000 32750 305712;305713;305714;305715;305716;305717;305718;305719;305720;305721;305722;305723 241947;241948;241949;241950;241951;241952;241953;241954 241952 8 NADMSEEMQQDSVECATQALEK Oxidation (M) 2529.0305 0.030532724 1943 P63167 DYNLL1 Dynein light chain 1, cytoplasmic yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.43 2.1 1 2 41 2 1 3 3 3 4 3 3 4 4 4 3 4 3 69.556 69.447 2;3 5.4595E-116 92349 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 192.94 187.38 826850000 78308000 31370000 0 26637000 35166000 40581000 37858000 51638000 31048000 78394000 79910000 129410000 45509000 58279000 102750000 36711 1943 32751 305724;305725;305726;305727;305728;305729;305730;305731;305732;305733;305734;305735;305736;305737;305738;305739;305740;305741;305742;305743;305744;305745;305746;305747;305748;305749;305750;305751;305752;305753;305754;305755;305756;305757;305758;305759;305760;305761;305762;305763;305764;305765;305766;305767 241955;241956;241957;241958;241959;241960;241961;241962;241963;241964;241965;241966;241967;241968;241969;241970;241971;241972;241973;241974;241975;241976;241977;241978;241979;241980;241981;241982;241983;241984;241985;241986;241987;241988;241989;241990;241991;241992;241993 241971 3120;3121 36 NADMSEEMQQDSVECATQALEK Unmodified 2513.0356 0.035618102 1943 P63167 DYNLL1 Dynein light chain 1, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 76.989 75.95 3 6.6579E-72 87941 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 126.55 122.89 671610000 28571000 200630000 0 4303000 25834000 20345000 11496000 49612000 20446000 50340000 47163000 38748000 15091000 32029000 127000000 36712 1943 32751 305768;305769;305770;305771;305772;305773;305774;305775;305776;305777;305778;305779;305780;305781;305782 241994;241995;241996;241997;241998;241999;242000;242001;242002;242003;242004;242005;242006;242007;242008;242009 241998 16 NADMSEEMQQDSVECATQALEK 2 Oxidation (M) 2545.0254 0.025447346 1943 P63167 DYNLL1 Dynein light chain 1, cytoplasmic yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.4 3.98 2 1 7 2 1 1 1 1 1 1 1 1 70.576 70.476 3 1.7163E-138 69615 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 185.71 184.42 423530000 48753000 40163000 0 34466000 0 42571000 0 0 30291000 0 61176000 76859000 49344000 0 39909000 36713 1943 32751 305783;305784;305785;305786;305787;305788;305789;305790;305791;305792 242010;242011;242012;242013;242014;242015;242016;242017;242018;242019;242020;242021 242016 3120;3121 9 NADNDWFRLESNK Unmodified 1607.7328 0.73283328 5159 Q9Y3C8 UFC1 Ubiquitin-fold modifier-conjugating enzyme 1 yes yes 0 0 1 By MS/MS 2 0 1 1 73.36 67.815 3 0.017509 85715 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 39.629 29.303 25131000 0 25131000 0 0 0 0 0 0 0 0 0 0 0 0 0 36714 5159 32752 305793 242022 242022 1 NADPILISLK Unmodified 1082.6336 0.63356015 5008 Q9ULV4 CORO1C Coronin-1C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 78.08 77.426 2 0.01064 89155 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.649 39.987 2678800000 0 2147500000 65097000 22054000 25157000 37329000 24554000 21693000 21691000 35552000 50530000 64441000 13880000 41897000 107410000 36715 5008 32753 305794;305795;305796;305797;305798;305799;305800;305801;305802;305803;305804;305805;305806;305807;305808 242023;242024;242025;242026;242027;242028;242029;242030;242031;242032;242033;242034;242035;242036 242034 13 NADVELQQR Unmodified 1071.5309 0.530886 689;613 O94973;O95782 AP2A2;AP2A1 AP-2 complex subunit alpha-2;AP-2 complex subunit alpha-1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.673 22.879 2 0.0088711 23892 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 68.371 45.841 244800000 0 0 0 11779000 9626500 21173000 12131000 13041000 9215200 21264000 25862000 40165000 24053000 21895000 34595000 36716 613;689 32754 305809;305810;305811;305812;305813;305814;305815;305816;305817;305818;305819;305820 242037;242038;242039;242040;242041;242042;242043 242041 7 NADVLFSSFQK Unmodified 1254.6245 0.62445203 4814 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.275 76.333 2 1.9936E-05 88609 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 148.73 122.55 237000000 0 0 0 12086000 12671000 15855000 16553000 21466000 17318000 20537000 25459000 28297000 19432000 18857000 28473000 36717 4814 32755 305821;305822;305823;305824;305825;305826;305827;305828;305829;305830;305831;305832 242044;242045;242046;242047;242048;242049;242050;242051;242052;242053 242053 10 NADVRPPFTYASLIR Unmodified 1718.9104 0.91040372 3227 Q8IVH2 FOXP4 Forkhead box protein P4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 81.211 81.314 3 0.0061251 93641 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.093 27.149 47141000 0 0 0 0 0 8101700 0 0 0 6833100 0 0 4972300 6836500 20398000 36718 3227 32756 305833;305834;305835;305836;305837;305838 242054;242055;242056;242057;242058 242056 5 NAEAVLQSPGLSGK Unmodified 1369.7201 0.72014333 2228 Q13045 FLII Protein flightless-1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.637 52.78 2 4.9973E-40 59417 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 166.11 147.8 297920000 0 0 0 12362000 12999000 24745000 15667000 10963000 14349000 30562000 33853000 41621000 32538000 22677000 45591000 36719 2228 32757 305839;305840;305841;305842;305843;305844;305845;305846;305847;305848;305849;305850 242059;242060;242061;242062;242063;242064;242065;242066;242067;242068;242069;242070;242071;242072 242064 13 NAEDCLYELPENIR Unmodified 1734.7883 0.78829925 4761 Q9NZ63 C9orf78 Uncharacterized protein C9orf78 yes yes 0 0 0 By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 78.89 79.008 2 2.4952E-13 91047 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 133.07 114.29 51393000 0 0 0 0 2264900 0 2966900 3419100 2609800 4289400 6174200 13103000 0 4126000 12440000 36720 4761 32758 305851;305852;305853;305854;305855;305856;305857;305858;305859;305860 242073;242074;242075;242076;242077 242073 5 NAEDCLYELPENIRVSSAK Unmodified 2207.0528 0.052846792 4761 Q9NZ63 C9orf78 Uncharacterized protein C9orf78 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 81.668 78.052 3 0.00048491 97159 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 42.711 34.211 81668000 0 76341000 5327100 0 0 0 0 0 0 0 0 0 0 0 0 36721 4761 32759 305861;305862 242078;242079 242078 2 NAEDVQHQILATESSNQEYVR Unmodified 2430.1411 0.14114453 478 O75330 HMMR Hyaluronan mediated motility receptor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.835 65.918 3 1.4876E-53 75471 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 120.75 115.54 94842000 0 0 0 3227400 5308100 7888400 6357700 7990800 5862000 7870000 8610700 11701000 7160300 8819100 14047000 36722 478 32760 305863;305864;305865;305866;305867;305868;305869;305870;305871;305872;305873;305874 242080;242081;242082;242083;242084;242085;242086;242087;242088;242089;242090;242091 242085 12 NAEEESESEAEEGD Unmodified 1523.5383 0.53833496 3043 Q7L1Q6 BZW1 Basic leucine zipper and W2 domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.452 16.632 2 0.0041872 16896 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 65.627 61.29 81888000 0 0 0 4837700 4322400 9883900 5114400 4821700 3933500 7443700 7178400 10211000 5153400 7765200 11223000 36723 3043 32761 305875;305876;305877;305878;305879;305880;305881;305882;305883;305884;305885;305886 242092;242093;242094;242095 242092 4 NAEEFTK Unmodified 837.38685 0.38684752 1959 P68036;A0A1B0GUS4 UBE2L3 Ubiquitin-conjugating enzyme E2 L3 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 13.211 13.084 2 0.035807 11623 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.67 36.931 236200000 0 52561000 0 8837200 7123000 14969000 13104000 9712300 7834400 20971000 22731000 13448000 15258000 13792000 35856000 36724 1959 32762 305887;305888;305889;305890;305891;305892;305893;305894;305895;305896;305897;305898;305899 242096;242097;242098;242099;242100;242101 242096 6 NAEIALR Unmodified 785.43955 0.43955179 4192 Q9BVL2 NUPL1 Nucleoporin p58/p45 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.109 31.297 2 0.025588 34216 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 80.462 18.124 308340000 0 0 0 19477000 16948000 19588000 20747000 26870000 16417000 28414000 28016000 38762000 35330000 24445000 33330000 36725 4192 32763 305900;305901;305902;305903;305904;305905;305906;305907;305908;305909;305910;305911 242102;242103;242104 242102 3 NAEIALRTQK Unmodified 1142.6408 0.6407708 4192 Q9BVL2 NUPL1 Nucleoporin p58/p45 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 29.64 25.227 2 0.043854 35201 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 100.58 69.898 62036000 59136000 0 2900400 0 0 0 0 0 0 0 0 0 0 0 0 36726 4192 32764 305912;305913 242105 242105 0 NAENAIEALK Unmodified 1071.556 0.55603811 1041 P16615;O14983 ATP2A2;ATP2A1 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 50.425 50.357 2 0.0026033 57482 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 81.95 34.956 76621000 0 0 0 11175000 14285000 0 15442000 14046000 0 0 0 0 10606000 11067000 0 36727 1041 32765 305914;305915;305916;305917;305918;305919 242106;242107;242108;242109;242110;242111 242111 6 NAENLEGK Unmodified 873.41921 0.41921028 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 7.7614 7.8006 2 0.01028 5880 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 80.165 31.604 18359000 0 0 0 0 2946300 2903400 3873300 4946100 3689500 0 0 0 0 0 0 36728 2556 32766 305920;305921;305922;305923;305924 242112;242113;242114 242114 3 NAENWCYYEGLEK Unmodified 1674.6984 0.69842161 2895 Q6N069 NAA16 N-alpha-acetyltransferase 16, NatA auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 69.847 69.944 2 0.00064246 80401 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 89.403 83.163 196120000 0 0 0 0 9121700 8446400 10076000 15360000 13459000 30506000 47665000 61485000 0 0 0 36729 2895 32767 305925;305926;305927;305928;305929;305930;305931;305932 242115;242116;242117;242118;242119;242120 242116 6 NAEPDEQDFEK Unmodified 1320.547 0.54698957 2397 Q14241 TCEB3 Transcription elongation factor B polypeptide 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.323 30.512 2 1.1412E-07 32755 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 173.37 162.51 222560000 0 0 0 12158000 12440000 14959000 14110000 12504000 16765000 17951000 24496000 25581000 22679000 17744000 31166000 36730 2397 32768 305933;305934;305935;305936;305937;305938;305939;305940;305941;305942;305943;305944 242121;242122;242123;242124;242125;242126;242127;242128;242129;242130;242131;242132;242133;242134;242135 242133 12 NAEPLINLDVNNPDFK Unmodified 1811.9054 0.90537792 5076 Q9Y224 C14orf166 UPF0568 protein C14orf166 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.62 3.02 5 24 1 2 2 2 2 2 2 2 2 2 2 2 2 2 2 83.689 82.961 2;3 1.0398E-56 102568 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 168.76 153.88 2744600000 6226000 2007400000 11642000 15047000 38311000 55042000 37068000 38475000 38735000 87688000 70585000 131220000 44344000 51611000 111210000 36731 5076 32769 305945;305946;305947;305948;305949;305950;305951;305952;305953;305954;305955;305956;305957;305958;305959;305960;305961;305962;305963;305964;305965;305966;305967;305968;305969;305970;305971;305972;305973 242136;242137;242138;242139;242140;242141;242142;242143;242144;242145;242146;242147;242148;242149;242150;242151;242152;242153;242154;242155;242156 242140 21 NAEQAATQLK Unmodified 1072.5513 0.55128709 3151 Q86UP2 KTN1 Kinectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.2 3.92 3 2 1 1 1 1 1 24.747 20.658 2 0.0072196 27046 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.787 33.975 61520000 29178000 17531000 14811000 0 0 0 0 0 0 0 0 0 0 0 0 36732 3151 32770 305974;305975;305976;305977;305978 242157;242158;242159 242157 3 NAEQNGPVDGQGDNPGPQAAEQGTDTAVPSDSDK Unmodified 3365.4516 0.45159222 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 48.203 46.829 3 2.8066E-81 56988 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.96 117.51 247940000 34568000 19589000 0 4639600 4017700 7342400 7090000 4889400 3970400 10539000 19934000 20146000 7424000 24094000 79698000 36733 1337 32771 305979;305980;305981;305982;305983;305984;305985;305986;305987;305988;305989;305990;305991;305992;305993;305994 242160;242161;242162;242163;242164;242165;242166;242167;242168;242169 242163 10 NAESNAELK Unmodified 974.46689 0.46688876 1076 P18621 RPL17 60S ribosomal protein L17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10.113 9.7141 2 1.3954E-05 7336 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 166.52 125.29 1296700000 27846000 129630000 0 73044000 70035000 71281000 101930000 76456000 59767000 73434000 138890000 137440000 139690000 92667000 104570000 36734 1076 32772 305995;305996;305997;305998;305999;306000;306001;306002;306003;306004;306005;306006;306007;306008 242170;242171;242172;242173;242174;242175;242176;242177;242178;242179;242180;242181 242178 11 NAETPAETPTTAEACSPSPAVQTFSEAK Unmodified 2891.3131 0.31309682 4642 Q9NUA8 ZBTB40 Zinc finger and BTB domain-containing protein 40 yes yes 0 0 0 By MS/MS 10 0 1 1 67.583 67.779 3 9.3218E-11 76934 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 45.07 42.597 5619900 0 0 0 0 0 0 0 0 0 0 0 0 0 5619900 0 36735 4642 32773 306009 242182 242182 1 NAETPEATTQQETDTDLPEAPPPPLEPAVIAR Unmodified 3397.6525 0.65252386 3308 Q8N163 CCAR2 Cell cycle and apoptosis regulator protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 2 1 2 1 1 2 1 1 2 84.344 84.452 3;4 1.4851E-20 97904 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 51.871 49.892 129430000 0 0 0 0 6777400 21506000 7883600 14786000 8540300 12987000 19882000 16592000 6549100 13923000 0 36736 3308 32774 306010;306011;306012;306013;306014;306015;306016;306017;306018;306019;306020;306021;306022;306023 242183;242184;242185;242186;242187;242188;242189;242190;242191;242192;242193;242194;242195 242189 13 NAFDYFNNMR Unmodified 1290.5452 0.54515585 2734 Q5JSH3 WDR44 WD repeat-containing protein 44 yes yes 0 0 0 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 76.557 76.764 2 0.0028263 88131 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.713 75.376 17361000 0 0 0 0 0 0 0 0 0 0 2873700 2660600 0 2771300 9055600 36737 2734 32775 306024;306025;306026;306027 242196 242196 1 NAFDYFNNMR Oxidation (M) 1306.5401 0.54007047 2734 Q5JSH3 WDR44 WD repeat-containing protein 44 yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 63.957 64.227 2 0.037183 73444 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 52.482 35.242 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36738 2734 32775 306028;306029 242197;242198 242197 2 NAFLESELDEK Unmodified 1293.6089 0.60886155 4729 Q9NXR1 NDE1 Nuclear distribution protein nudE homolog 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 63.076 63.268 2 0.00029757 72857 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 90.108 68.022 89181000 0 0 0 0 9671900 0 0 9340800 8486400 12571000 11620000 14770000 8818700 5772300 8129500 36739 4729 32776 306030;306031;306032;306033;306034;306035;306036;306037;306038;306039 242199;242200;242201;242202;242203;242204;242205;242206;242207;242208;242209;242210 242210 12 NAFVTGIAR Unmodified 947.51886 0.51886475 3050 Q7L576;Q96F07 CYFIP1;CYFIP2 Cytoplasmic FMR1-interacting protein 1;Cytoplasmic FMR1-interacting protein 2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 49.296 49.616 2 0.0074164 56016 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 72.485 43.972 118030000 0 0 0 0 0 17864000 11669000 10018000 7316800 0 15974000 18205000 0 13933000 23054000 36740 3050 32777 306040;306041;306042;306043;306044;306045;306046;306047;306048 242211;242212;242213;242214;242215;242216 242215 6 NAFYIGSYQQCINEAQR Unmodified 2060.9374 0.9374231 190 O14579 COPE Coatomer subunit epsilon yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 2 2 1 2 2 2 2 2 2 2 2 75.735 75.817 2;3 4.5307E-82 87093 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 216.83 210.64 360450000 0 0 0 3991300 13774000 29152000 9019000 22844000 23759000 44485000 46319000 46162000 29661000 22302000 68982000 36741 190 32778 306049;306050;306051;306052;306053;306054;306055;306056;306057;306058;306059;306060;306061;306062;306063;306064;306065;306066;306067;306068;306069;306070 242217;242218;242219;242220;242221;242222;242223;242224;242225;242226;242227;242228;242229;242230;242231;242232;242233;242234;242235 242222 17 NAFYIGSYQQCINEAQRVK Unmodified 2288.1008 0.10080004 190 O14579 COPE Coatomer subunit epsilon yes yes 0 0 1 By MS/MS 2 0 1 1 80.582 72.451 3 5.6357E-18 95041 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 111.77 103.58 46219000 46219000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36742 190 32779 306071 242236;242237 242236 2 NAGDLAPAGGAASASTDEAADAESGTR Unmodified 2432.0688 0.068767445 4733 Q9NXV6 CDKN2AIP CDKN2A-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 47.676 47.839 2;3 5.291E-42 53724 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 92.822 89.899 363520000 0 0 0 18074000 26784000 26463000 27723000 22396000 21025000 43184000 36193000 41096000 29756000 30705000 40119000 36743 4733 32780 306072;306073;306074;306075;306076;306077;306078;306079;306080;306081;306082;306083;306084;306085;306086;306087;306088;306089;306090;306091;306092;306093;306094;306095 242238;242239;242240;242241;242242;242243;242244;242245;242246;242247;242248;242249;242250;242251 242239 14 NAGETLLQR Unmodified 1000.5302 0.53015772 2989 Q6W2J9 BCOR BCL-6 corepressor yes yes 0 0 0 By MS/MS 10 0 1 1 35.379 35.434 2 0.034739 39012 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 46.39 19.788 14273000 0 0 0 0 0 0 14273000 0 0 0 0 0 0 0 0 36744 2989 32781 306096 242252 242252 1 NAGFQEYTIPITVK Unmodified 1579.8246 0.8246084 2417 Q14574 DSC3 Desmocollin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 81.663 81.648 2 4.3076E-08 94394 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 120.77 83.221 22166000 0 0 0 4716200 0 0 3594300 13856000 0 0 0 0 0 0 0 36745 2417 32782 306097;306098;306099 242253;242254 242253 2 NAGFTPQER Unmodified 1018.4832 0.48320752 1222 P27695 APEX1 DNA-(apurinic or apyrimidinic site) lyase;DNA-(apurinic or apyrimidinic site) lyase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 22.294 22.533 2 0.0039854 22414 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 97.635 52.554 151820000 0 0 0 0 2762100 2624000 3156900 4376600 2930800 6915400 23841000 27796000 5279000 18202000 53938000 36746 1222 32783 306100;306101;306102;306103;306104;306105;306106;306107;306108;306109;306110 242255;242256;242257;242258;242259;242260 242256 6 NAGGGGLENALSK Unmodified 1186.5942 0.59421454 3606 Q8WZA9 IRGQ Immunity-related GTPase family Q protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 17.204 17.431 2 0.035785 17010 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 47.706 18.788 55516000 0 0 0 0 0 5455400 5012100 4139200 3453900 6135100 0 9416700 8191300 6500900 7211700 36747 3606 32784 306111;306112;306113;306114;306115;306116;306117;306118;306119 242261 242261 1 NAGLAFIELVNEGR Unmodified 1501.7889 0.7888916 1638 P50851 LRBA Lipopolysaccharide-responsive and beige-like anchor protein yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 90.087 90.239 2 2.4855E-05 104789 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 87.001 75.407 3949900 0 0 0 0 0 0 0 1081200 694590 1268000 0 0 0 906060 0 36748 1638 32785 306120;306121;306122;306123 242262;242263;242264 242262 3 NAGNAEDPHTETQQPEATAAATSNPSSMTDTPGNPAAP Unmodified 3747.6191 0.61906825 694 O95817 BAG3 BAG family molecular chaperone regulator 3 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 60.278 60.539 3 0.00089367 68608 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 20.062 18.554 73227000 0 0 0 0 0 4929600 0 6428400 3152300 8150700 7684700 11335000 6563900 8259700 16723000 36749 694 32786 306124;306125;306126;306127;306128;306129;306130;306131;306132 242265;242266;242267;242268;242269;242270 242267 6 NAGNCLSPAVIVGLLK Unmodified 1624.8971 0.89706184 304 O43175 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.7 3.52 2 1 7 1 2 1 1 1 1 1 1 1 95.891 94.364 2 7.3818E-39 116606 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 138.89 129.48 188840000 93579000 71812000 0 0 0 1195000 0 1512800 0 4629700 2880500 2508900 0 1746700 8972600 36750 304 32787 306133;306134;306135;306136;306137;306138;306139;306140;306141;306142 242271;242272;242273;242274;242275;242276;242277;242278 242275 8 NAGNEQDLGIQYK Unmodified 1448.6896 0.68957148 1340 P35221 CTNNA1 Catenin alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 44.741 44.912 2 2.0579E-51 50057 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 182.71 156.2 278060000 0 0 0 16666000 15852000 20365000 15029000 14849000 14098000 27767000 29852000 31703000 32699000 19810000 39367000 36751 1340 32788 306143;306144;306145;306146;306147;306148;306149;306150;306151;306152;306153;306154 242279;242280;242281;242282;242283;242284;242285;242286;242287;242288;242289 242287 9 NAGVEGSLIVEK Unmodified 1214.6507 0.65066678 930 P10809 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.22 3.79 1 10 2 24 5 7 1 2 2 2 2 2 2 2 2 2 2 2 2 54.925 53.772 1;2 1.6556E-23 66663 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 172.17 105.9 3504700000 146720000 1806700000 17273000 42960000 58806000 152200000 93300000 87150000 105450000 155150000 172000000 149110000 159150000 120990000 237740000 36752 930 32789 306155;306156;306157;306158;306159;306160;306161;306162;306163;306164;306165;306166;306167;306168;306169;306170;306171;306172;306173;306174;306175;306176;306177;306178;306179;306180;306181;306182;306183;306184;306185;306186;306187;306188;306189;306190;306191 242290;242291;242292;242293;242294;242295;242296;242297;242298;242299;242300;242301;242302;242303;242304;242305;242306;242307;242308;242309;242310;242311;242312;242313;242314;242315;242316;242317;242318;242319;242320;242321;242322;242323;242324;242325;242326;242327;242328;242329;242330;242331;242332;242333;242334;242335;242336;242337;242338;242339;242340;242341;242342;242343;242344 242307 54 NAIANASTLAEVER Unmodified 1457.7474 0.74742071 892 P09661 SNRPA1 U2 small nuclear ribonucleoprotein A' yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.43 2.06 1 13 1 1 1 1 1 1 1 1 1 1 1 1 2 63.209 62.911 2;3 2.5806E-72 71614 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 188.06 150.87 1306600000 0 23519000 0 58309000 68397000 64373000 78503000 83426000 63685000 126070000 109160000 184060000 120800000 106830000 219470000 36753 892 32790 306192;306193;306194;306195;306196;306197;306198;306199;306200;306201;306202;306203;306204;306205 242345;242346;242347;242348;242349;242350;242351;242352;242353;242354;242355;242356;242357;242358;242359;242360 242358 15 NAIANASTLAEVERLK Unmodified 1698.9264 0.92644771 892 P09661 SNRPA1 U2 small nuclear ribonucleoprotein A' yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.29 0.452 5 2 4 2 1 80.231 75.102 3 7.1079E-11 96424 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 109.35 92.133 3401600000 2582400000 585420000 233790000 0 0 0 0 0 0 0 0 0 0 0 0 36754 892 32791 306206;306207;306208;306209;306210;306211;306212 242361;242362;242363;242364;242365;242366;242367;242368;242369 242366 8 NAIDDGCVVPGAGAVEVAMAEALIK Oxidation (M) 2485.2193 0.21926019 1410 P40227 CCT6A T-complex protein 1 subunit zeta yes yes 0 1 0 By MS/MS By matching 2.25 0.433 3 1 3 1 95.179 91.335 2;3 1.7622E-19 109196 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 82.302 68.448 133780000 0 132100000 1674900 0 0 0 0 0 0 0 0 0 0 0 0 36755 1410 32792 306213;306214;306215;306216 242370;242371;242372 242372 2217 1 NAIDDGCVVPGAGAVEVAMAEALIK Unmodified 2469.2243 0.22434557 1410 P40227 CCT6A T-complex protein 1 subunit zeta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 6 3 2 5 2 100.08 95.91 2;3 1.7497E-30 119013 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 100.79 96.238 1045800000 57047000 967170000 21614000 0 0 0 0 0 0 0 0 0 0 0 0 36756 1410 32792 306217;306218;306219;306220;306221;306222;306223;306224;306225 242373;242374;242375;242376;242377;242378;242379;242380 242379 6 NAIEHPVR Unmodified 934.49846 0.49846366 4062 Q99805 TM9SF2 Transmembrane 9 superfamily member 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.438 11.557 2 0.021457 10621 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 61.962 34.438 20966000 0 0 0 1400100 986570 1549300 1658900 1480200 1164000 1900700 0 2809200 2720800 2196500 3099800 36757 4062 32793 306226;306227;306228;306229;306230;306231;306232;306233;306234;306235;306236 242381;242382 242381 2 NAIFQLEK Unmodified 961.52328 0.52328142 3 A0AVT1 UBA6 Ubiquitin-like modifier-activating enzyme 6 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 61.019 60.916 2 0.017693 69567 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 65.252 35.067 11886000 0 0 0 2252100 0 4382500 2124400 0 0 3127100 0 0 0 0 0 36758 3 32794 306237;306238;306239;306240 242383 242383 1 NAINTEMYHEIMR Unmodified 1620.7388 0.73884664 511 O75521 ECI2 Enoyl-CoA delta isomerase 2, mitochondrial yes yes 0 0 0 By MS/MS 10 0 1 1 67.272 67.79 3 0.0021181 77121 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.568 37.469 6636000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6636000 36759 511 32795 306241 242384 242384 1 NAIPQTGK Unmodified 827.45012 0.45011648 1184 P25208 NFYB Nuclear transcription factor Y subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 12.119 12.299 2 0.023017 10565 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.682 29.392 18602000 0 0 0 1680900 0 1524200 1529200 0 0 0 2637700 3357000 0 1861400 6011800 36760 1184 32796 306242;306243;306244;306245;306246;306247;306248 242385 242385 1 NAIQEIQRK Unmodified 1098.6146 0.61455605 2330 Q13618 CUL3 Cullin-3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 28.853 24.479 2 0.0046739 34377 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 137.9 72.652 188900000 159680000 18579000 10643000 0 0 0 0 0 0 0 0 0 0 0 0 36761 2330 32797 306249;306250;306251 242386;242387;242388 242387 3 NAIQIVQQAVK Unmodified 1210.7034 0.70337105 2492 Q15058 KIF14 Kinesin-like protein KIF14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 71.622 71.068 2 0.013863 82254 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 46.129 34.964 37496000 7667800 0 0 0 2556400 3464300 1948600 1828100 2066500 3757700 2630200 2604200 2274700 2413600 4283600 36762 2492 32798 306252;306253;306254;306255;306256;306257;306258;306259;306260;306261;306262;306263 242389;242390;242391 242391 3 NAISLPQLNQAAYDSLVVGK Unmodified 2100.1215 0.1215187 2039 Q00587 CDC42EP1 Cdc42 effector protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 2 1 91.395 90.288 2;3 2.5136E-06 111777 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.972 55.066 13699000 0 8958300 0 0 0 0 0 0 0 3601600 1139200 0 0 0 0 36763 2039 32799 306264;306265;306266;306267 242392;242393;242394 242394 3 NAISLPVIGGPQALTLPTAQAPPKPPR Unmodified 2703.5436 0.54356994 192 O14613 CDC42EP2 Cdc42 effector protein 2 yes yes 0 0 1 By MS/MS 10 0 1 1 90.159 90.298 3 1.5526E-14 104590 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.95 56.01 2432400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2432400 36764 192 32800 306268 242395 242395 1 NAIVVLIPK Unmodified 965.62735 0.62735256 5110 Q9Y2L1 DIS3 Exosome complex exonuclease RRP44 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 82.092 77.426 2 0.008734 99027 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.296 83.548 244350000 191250000 27642000 25457000 0 0 0 0 0 0 0 0 0 0 0 0 36765 5110 32801 306269;306270;306271;306272 242396;242397;242398;242399 242398 4 NALADFLPVMK Oxidation (M) 1233.6427 0.64274463 4998 Q9ULK4 MED23 Mediator of RNA polymerase II transcription subunit 23 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 82.661 82.696 2 0.0076117 95810 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 48.423 36.933 6167900 0 0 0 0 1272300 1933700 0 1551300 1410500 0 0 0 0 0 0 36766 4998 32802 306273;306274;306275;306276 242400;242401 242401 6341 2 NALADFLPVMK Unmodified 1217.6478 0.64783001 4998 Q9ULK4 MED23 Mediator of RNA polymerase II transcription subunit 23 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 96.064 91.243 2 0.00173 113082 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.67 66.884 10696000 0 10696000 0 0 0 0 0 0 0 0 0 0 0 0 0 36767 4998 32802 306277;306278 242402;242403 242402 2 NALANQSDCVLHR Unmodified 1496.7154 0.71540908 4944 Q9UJX3 ANAPC7 Anaphase-promoting complex subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 2 2 1 1 37.229 37.6 2;3 2.3715E-08 41564 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 105.65 94.703 146900000 0 0 0 0 3979400 0 0 0 10167000 0 20722000 31887000 51246000 20575000 8321600 36768 4944 32803 306279;306280;306281;306282;306283;306284;306285;306286;306287 242404;242405;242406;242407;242408;242409;242410;242411 242408 6 NALDLLLPK Unmodified 995.60153 0.60153174 1285 P30566 ADSL Adenylosuccinate lyase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 85.349 85.422 2 0.0074164 98499 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.485 51.185 65293000 0 0 0 1204700 0 1959900 0 2758600 0 4893900 9005500 6887000 3091400 6969700 28522000 36769 1285 32804 306288;306289;306290;306291;306292;306293;306294;306295;306296 242412;242413;242414;242415;242416 242413 5 NALDPMSVLLAR Oxidation (M) 1314.6966 0.69657112 1468 P42785 PRCP Lysosomal Pro-X carboxypeptidase yes yes 0 1 0 By MS/MS 10 0 1 1 77.894 77.422 2 0.0055301 89811 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 48.981 32.205 3954600 0 0 0 3954600 0 0 0 0 0 0 0 0 0 0 0 36770 1468 32805 306297 242417 242417 2305 1 NALEIVMK Unmodified 916.50519 0.50518852 17 A3KN83 SBNO1 Protein strawberry notch homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 63.892 64.038 2 0.025292 73109 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 58.815 31.561 65695000 0 0 0 4202100 0 4206600 6111100 4873900 4382900 4976200 8943400 8269700 4759700 6110300 8858700 36771 17 32806 306298;306299;306300;306301;306302;306303;306304;306305;306306;306307;306308 242418;242419;242420;242421;242422;242423;242424 242420 7 NALEIVMK Oxidation (M) 932.5001 0.50010314 17 A3KN83 SBNO1 Protein strawberry notch homolog 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 44.402 44.621 2 0.039369 49798 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 69.998 35.995 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36772 17 32806 306309;306310;306311 242425;242426;242427 242427 3 NALESFPELTIITR Unmodified 1602.8617 0.86172219 2649 Q2KHR3 QSER1 Glutamine and serine-rich protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 91.454 91.607 2 0.002931 106325 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 49.5 34.81 4753800 0 0 0 0 0 0 0 0 0 1618000 1082700 0 0 0 2053100 36773 2649 32807 306312;306313;306314 242428;242429 242428 2 NALESYAFNMK Oxidation (M) 1302.5914 0.59143734 908 P0DMV9;P0DMV8 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.97 3.87 1 20 1 13 4 7 11 1 1 1 1 1 1 1 1 1 1 1 2 64.823 62.646 2;3 4.3943E-09 74988 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.36 117.65 9584500000 232090000 7651600000 399190000 92786000 56770000 60410000 95402000 68378000 51435000 96364000 165200000 190370000 92357000 127390000 204760000 36774 908 32808 306315;306316;306317;306318;306319;306320;306321;306322;306323;306324;306325;306326;306327;306328;306329;306330;306331;306332;306333;306334;306335;306336;306337;306338;306339;306340;306341;306342;306343;306344;306345;306346;306347;306348;306349 242430;242431;242432;242433;242434;242435;242436;242437;242438;242439;242440;242441;242442;242443;242444;242445;242446;242447;242448;242449;242450;242451;242452;242453;242454;242455;242456;242457;242458;242459;242460;242461;242462;242463;242464;242465;242466;242467;242468;242469;242470;242471;242472;242473;242474;242475;242476;242477;242478;242479;242480;242481;242482 242435 1171 50 NALESYAFNMK Unmodified 1286.5965 0.59652272 908 P0DMV9;P0DMV8 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.65 3.66 1 3 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 75.891 75.12 2 8.2863E-29 92938 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 198.65 172.19 14065000000 528220000 11259000000 537760000 77084000 63181000 89433000 55612000 76277000 57822000 113610000 225230000 206800000 82654000 169250000 523760000 36775 908 32808 306350;306351;306352;306353;306354;306355;306356;306357;306358;306359;306360;306361;306362;306363;306364;306365;306366 242483;242484;242485;242486;242487;242488;242489;242490;242491;242492;242493;242494;242495;242496;242497;242498;242499;242500;242501;242502;242503;242504;242505 242494 22 NALESYTYNIK Unmodified 1314.6456 0.6455814 1743 P54652 HSPA2 Heat shock-related 70 kDa protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 66.002 61.209 2 3.9874E-05 78146 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.08 111.7 233160000 0 231150000 2009900 0 0 0 0 0 0 0 0 0 0 0 0 36776 1743 32809 306367;306368;306369;306370 242506;242507;242508;242509 242506 4 NALGNQSTPAPPTGEVADTPLEPGK Unmodified 2460.2132 0.21324684 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 71.199 71.459 3 6.1369E-10 81709 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.247 41.232 52071000 0 0 0 0 0 0 0 6799300 6460900 0 0 14912000 0 9281200 14618000 36777 645 32810 306371;306372;306373;306374;306375 242510;242511;242512 242510 3 NALGPGLSPELGPLPALR Unmodified 1770.9992 0.99921872 3314 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 89.836 89.945 2 1.4259E-05 104386 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 93.011 84.057 46370000 0 0 0 0 1957300 3040700 1302300 2344600 1955700 7181700 5222300 5053500 1784100 3833600 12694000 36778 3314 32811 306376;306377;306378;306379;306380;306381;306382;306383;306384;306385;306386 242513;242514;242515;242516;242517;242518;242519;242520;242521;242522;242523;242524;242525 242513 13 NALLDPNTTLDQEEVQQHK Unmodified 2192.0709 0.070939697 5062 Q9UPW0 FOXJ3 Forkhead box protein J3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 65.57 64.802 3 1.1614E-25 74307 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 98.796 84.027 232970000 0 110690000 0 6336800 6637000 11843000 8238400 10343000 9000500 12030000 17241000 13623000 13597000 13394000 0 36779 5062 32812 306387;306388;306389;306390;306391;306392;306393;306394;306395;306396;306397;306398;306399 242526;242527;242528;242529;242530;242531;242532;242533;242534;242535;242536;242537;242538;242539;242540 242538 13 NALLGVTGAPK Unmodified 1039.6026 0.60259438 3893 Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 52.83 52.862 2 0.0037353 59480 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 63.184 46.408 90512000 0 0 0 7966300 6851800 12738000 8859700 7602700 6723500 0 0 25570000 14199000 0 0 36780 3893 32813 306400;306401;306402;306403;306404;306405;306406;306407 242541;242542;242543;242544;242545;242546;242547;242548 242543 8 NALLLLPEEQQDPK Unmodified 1606.8566 0.85663681 4467 Q9H9A5 CNOT10 CCR4-NOT transcription complex subunit 10 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 78.737 78.784 2 6.2665E-14 90908 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 115.18 81.766 166920000 0 0 0 6987300 11641000 16349000 8885700 10714000 0 15931000 15189000 19164000 17228000 18486000 26343000 36781 4467 32814 306408;306409;306410;306411;306412;306413;306414;306415;306416;306417;306418 242549;242550;242551;242552;242553;242554;242555;242556;242557;242558;242559;242560;242561 242550 9 NALLSLAK Unmodified 828.5069 0.50690308 773 P04083 ANXA1 Annexin A1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 58.377 58.551 2 0.0067687 65794 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 97.798 20.74 512830000 0 0 0 33847000 0 23037000 33422000 49519000 13125000 28341000 54579000 67166000 38880000 37889000 133020000 36782 773 32815 306419;306420;306421;306422;306423;306424;306425;306426;306427;306428;306429 242562;242563;242564;242565;242566 242565 4 NALLSLVGSDP Unmodified 1084.5764 0.57643921 2812 Q5VT79;P13928 ANXA8L2;ANXA8 Annexin A8-like protein 2;Annexin A8 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.88 3.69 1 1 6 1 1 1 1 1 1 1 1 89.48 89.581 1;2 0.0012251 92348 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 90.709 72.8 113140000 34341000 45832000 0 6555000 0 0 2046000 0 0 1493100 5872500 5920100 0 0 11082000 36783 2812 32816 306430;306431;306432;306433;306434;306435;306436;306437 242567;242568;242569;242570 242569 3 NALNIGMVEEVLQSSDETK Unmodified 2076.0045 0.0044996155 4638 Q9NTX5 ECHDC1 Ethylmalonyl-CoA decarboxylase yes yes 0 0 0 By MS/MS By MS/MS 2.2 0.4 4 1 3 2 96.512 92.951 2;3 1.5819E-267 114679 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 261.41 245.65 99751000 0 98281000 1470600 0 0 0 0 0 0 0 0 0 0 0 0 36784 4638 32817 306438;306439;306440;306441;306442 242571;242572;242573;242574 242571 3 NALNIGMVEEVLQSSDETK Oxidation (M) 2091.9994 0.99941424 4638 Q9NTX5 ECHDC1 Ethylmalonyl-CoA decarboxylase yes yes 0 1 0 By MS/MS 3 0 1 1 89.655 86.444 2 9.5798E-13 103560 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 79.466 71.742 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36785 4638 32817 306443 242575 242575 6047 1 NALNVLQR Unmodified 926.52976 0.52976379 3909 Q96KP1 EXOC2 Exocyst complex component 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 48.626 48.713 2 0.018686 54280 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.236 42.308 57968000 0 0 0 4683600 6574100 8299300 7440200 0 0 9454500 0 9964000 0 0 11553000 36786 3909 32818 306444;306445;306446;306447;306448;306449;306450 242576 242576 1 NALPPVLTTVNGQSPPEHSAPAK Unmodified 2324.2125 0.21245898 2961 Q6PKG0 LARP1 La-related protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 69.83 69.53 3 4.4366E-19 89612 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.11 81.546 195580000 0 86222000 0 5860200 5545200 8043500 7619100 7597200 6366500 9121400 11434000 14258000 9015000 10792000 13710000 36787 2961 32819 306451;306452;306453;306454;306455;306456;306457;306458;306459;306460;306461;306462;306463 242577;242578;242579;242580;242581;242582;242583;242584;242585;242586;242587;242588;242589;242590;242591;242592 242582 16 NALSSALAQNTDLK Unmodified 1444.7522 0.75217174 4401 Q9H4L5 OSBPL3 Oxysterol-binding protein-related protein 3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 67.489 66.84 2 6.2566E-06 75705 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 108.98 84.146 194090000 0 65330000 0 0 11446000 13456000 8637900 7846400 7986200 14849000 10527000 12043000 16142000 10466000 15361000 36788 4401 32820 306464;306465;306466;306467;306468;306469;306470;306471;306472;306473;306474;306475;306476 242593;242594;242595;242596;242597;242598;242599;242600;242601;242602;242603;242604 242596 11 NALSSLWGK Unmodified 974.51853 0.5185304 1809 P60228 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 72.63 72.738 2 0.012989 83528 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 60.478 42.492 73773000 0 0 0 4167300 0 5861300 0 5422600 4032600 8626600 8528600 6101900 5424400 7423100 18185000 36789 1809 32821 306477;306478;306479;306480;306481;306482;306483;306484;306485;306486 242605;242606;242607;242608;242609;242610;242611;242612;242613;242614 242608 10 NALTALFTSSGRPPSQPNTQDK Unmodified 2329.1662 0.16623707 5007 Q9ULV3 CIZ1 Cip1-interacting zinc finger protein yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By matching 10 0 5 1 1 1 1 1 77.805 77.937 3 0.00023537 90010 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 40.622 27.448 25424000 0 0 0 0 0 0 0 3873200 5708400 7532100 0 0 3107400 5202500 0 36790 5007 32822 306487;306488;306489;306490;306491 242615;242616 242615 2 NALTPSSK Unmodified 816.43413 0.43413207 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 12.303 8.96 2 0.012137 12172 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.51 39.796 177190000 0 177190000 0 0 0 0 0 0 0 0 0 0 0 0 0 36791 2495 32823 306492;306493 242617 242617 1 NALTTLAGPLTPPVK Unmodified 1491.8661 0.86607929 4381 Q9H3P2 NELFA Negative elongation factor A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 84.146 83.389 2;3 4.055E-18 104148 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 165.58 135.19 444490000 0 233510000 3254900 6619200 9458800 17563000 14981000 13588000 12802000 24520000 21840000 22148000 17585000 16975000 29642000 36792 4381 32824 306494;306495;306496;306497;306498;306499;306500;306501;306502;306503;306504;306505;306506;306507;306508 242618;242619;242620;242621;242622;242623;242624;242625;242626;242627;242628;242629;242630;242631 242622 11 NALVASEAK Unmodified 901.4869 0.48689592 2382 Q14161 GIT2 ARF GTPase-activating protein GIT2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 18.765 18.924 2 0.044423 19323 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 43.448 14.089 56807000 0 0 0 4031200 4001800 6930300 5155800 3939100 5241700 5991400 5815800 6827600 5063600 3808400 0 36793 2382 32825 306509;306510;306511;306512;306513;306514;306515;306516;306517;306518;306519 242632 242632 1 NAMGSLASQATK Oxidation (M) 1193.571 0.57103625 1752 P55036 PSMD4 26S proteasome non-ATPase regulatory subunit 4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 17.485 17.614 2 7.9744E-05 16551 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 87.298 57.825 170560000 0 0 0 15114000 15147000 16976000 5521800 4733300 3343400 26012000 28349000 55358000 0 0 0 36794 1752 32826 306520;306521;306522;306523;306524;306525;306526;306527;306528 242633;242634;242635;242636;242637;242638;242639;242640;242641;242642;242643 242637 2853 11 NAMGSLASQATK Unmodified 1177.5761 0.57612163 1752 P55036 PSMD4 26S proteasome non-ATPase regulatory subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.998 37.178 2 3.88E-08 41408 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 123.79 100.44 663100000 0 0 0 37145000 52567000 49811000 18263000 18098000 13805000 90780000 113820000 168950000 17682000 21044000 61126000 36795 1752 32826 306529;306530;306531;306532;306533;306534;306535;306536;306537;306538;306539;306540 242644;242645;242646;242647;242648;242649;242650;242651;242652;242653 242645 10 NAMSLPQLNEK Oxidation (M) 1259.618 0.61798644 4383 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 2 1 1 44.646 44.834 2 0.0002178 50084 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 96.143 74.679 151630000 0 0 0 9101400 11121000 0 20606000 0 0 13914000 22567000 24893000 21154000 14875000 13395000 36796 4383 32827 306541;306542;306543;306544;306545;306546;306547;306548;306549;306550;306551 242654;242655;242656;242657;242658;242659;242660;242661;242662;242663;242664;242665;242666 242655 5840 12 NAMSLPQLNEK Unmodified 1243.6231 0.62307182 4383 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 62.588 62.196 2 2.8475E-10 79699 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 151.22 121.05 262570000 0 29810000 0 9903600 12983000 0 13476000 15246000 14303000 22887000 37156000 29729000 20108000 19812000 37161000 36797 4383 32827 306552;306553;306554;306555;306556;306557;306558;306559;306560;306561;306562;306563 242667;242668;242669;242670;242671;242672;242673;242674;242675;242676;242677;242678;242679 242669 11 NAMTSAPSK Unmodified 905.42767 0.42766648 17 A3KN83 SBNO1 Protein strawberry notch homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 9.753 9.8416 2 0.011592 8234 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 62.582 44.734 14304000 0 0 0 1352600 873270 1573800 0 1808400 0 2174600 0 2656600 2237200 1627800 0 36798 17 32828 306564;306565;306566;306567;306568;306569;306570;306571 242680;242681;242682 242682 3 NANAEPAVQR Unmodified 1068.5312 0.53122035 995 P14209 CD99 CD99 antigen yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.167 13.322 2 0.00054609 12523 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 128 111.79 374990000 0 0 0 21101000 25993000 22427000 28292000 22253000 19516000 33984000 34577000 41635000 40076000 28152000 56983000 36799 995 32829 306572;306573;306574;306575;306576;306577;306578;306579;306580;306581;306582;306583 242683;242684;242685;242686;242687;242688;242689;242690;242691;242692;242693;242694;242695;242696 242685 14 NANAVMEYEK Unmodified 1167.523 0.52302343 4035 Q99615 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 34.289 33.365 2 0.001915 42346 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.57 91.174 533170000 7507100 271860000 0 9448600 10930000 13285000 16667000 17034000 10741000 25187000 28319000 23506000 22704000 22319000 53659000 36800 4035 32830 306584;306585;306586;306587;306588;306589;306590;306591;306592;306593;306594;306595;306596;306597;306598 242697;242698;242699;242700;242701;242702;242703;242704;242705;242706;242707;242708;242709;242710 242700 13 NANAVMEYEK Oxidation (M) 1183.5179 0.51793805 4035 Q99615 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS 8.9 2.69 2 1 18 3 1 1 2 2 2 2 2 1 1 1 1 2 22.313 21.841 2 0.0032627 22314 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.908 56.239 201500000 0 62104000 0 3844000 2888800 6367800 19222000 9668500 14707000 12277000 12399000 15893000 9331500 8934500 23862000 36801 4035 32830 306599;306600;306601;306602;306603;306604;306605;306606;306607;306608;306609;306610;306611;306612;306613;306614;306615;306616;306617;306618;306619 242711;242712;242713;242714;242715;242716;242717;242718;242719;242720;242721 242717 5542 11 NAPAIIFIDELDAIAPK Unmodified 1809.9877 0.98765098 1755 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.4 3.72 2 3 2 3 3 4 1 1 1 102.37 101.31 2;3 2.7169E-18 95200 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 143.25 139.82 1711700000 709990000 995040000 0 896730 0 0 0 0 0 1377500 0 0 0 0 4365200 36802 1755 32831 306620;306621;306622;306623;306624;306625;306626;306627;306628;306629 242722;242723;242724;242725;242726;242727;242728 242727 5 NAPNDASYDAVR Unmodified 1291.5793 0.57929275 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.272 28.466 2 5.8695E-08 30240 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 119.68 99.894 473300000 0 0 0 24930000 29223000 37040000 27462000 30221000 29597000 47453000 52783000 59712000 44262000 42305000 48316000 36803 3641 32832 306630;306631;306632;306633;306634;306635;306636;306637;306638;306639;306640;306641 242729;242730;242731;242732;242733;242734;242735;242736;242737;242738;242739;242740;242741 242735 13 NAPVTFIVDGAVVK Unmodified 1428.7977 0.79766537 4409 Q9H5V9 CXorf56 UPF0428 protein CXorf56 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 83.379 82.124 2 0.00050602 95262 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 68.536 47.072 134910000 5293500 75161000 4940200 0 3024200 3879900 2956300 3554100 3281800 4728000 6270300 7389200 2539000 0 11893000 36804 4409 32833 306642;306643;306644;306645;306646;306647;306648;306649;306650;306651;306652;306653;306654;306655 242742;242743;242744;242745;242746;242747;242748;242749;242750;242751;242752;242753;242754 242742 13 NAPWTLTPEFLAEHR Unmodified 1780.8897 0.88966827 1577 P49585 PCYT1A Choline-phosphate cytidylyltransferase A yes yes 0 0 0 By MS/MS 10 0 1 1 85.368 85.536 3 0.0041974 98851 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.857 34.953 3770000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3770000 36805 1577 32834 306656 242755 242755 1 NAQAIEDMVGYAQETQHEK Oxidation (M) 2176.9695 0.96951109 4011 Q99460 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.09 3.85 4 7 2 2 1 1 1 1 1 1 1 48.78 47.11 3 8.1675E-85 61472 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 169.67 162.31 303540000 0 99909000 71062000 8154900 16331000 20531000 0 0 0 20268000 23614000 33981000 0 0 9685900 36806 4011 32835 306657;306658;306659;306660;306661;306662;306663;306664;306665;306666;306667 242756;242757;242758;242759;242760;242761;242762;242763;242764;242765;242766;242767 242760 5503 12 NAQAIEDMVGYAQETQHEK Unmodified 2160.9746 0.97459647 4011 Q99460 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.54 5 1 15 1 3 2 1 1 1 1 1 1 2 2 2 1 1 1 75.496 74.304 2;3 1.6756E-220 93115 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 248.99 229.39 1425600000 28811000 875810000 180200000 7006100 19195000 22342000 5331100 16895000 8787300 61379000 50523000 71702000 7855600 12100000 57699000 36807 4011 32835 306668;306669;306670;306671;306672;306673;306674;306675;306676;306677;306678;306679;306680;306681;306682;306683;306684;306685;306686;306687;306688 242768;242769;242770;242771;242772;242773;242774;242775;242776;242777;242778;242779;242780;242781;242782;242783;242784;242785;242786;242787;242788 242774 21 NAQAPLALTESHLATLASSSQSPEAIK Unmodified 2734.4137 0.41373756 4584 Q9NR09 BIRC6 Baculoviral IAP repeat-containing protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.8 3.12 3 1 1 1 2 1 1 86.625 82.913 3 1.5336E-145 104458 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 161.25 151.76 192540000 42802000 125010000 20592000 0 0 0 0 0 0 4137000 0 0 0 0 0 36808 4584 32836 306689;306690;306691;306692;306693 242789;242790;242791;242792;242793;242794;242795;242796 242792 8 NAQAQQEFK Unmodified 1062.5094 0.50942227 4035 Q99615 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 13.782 13.262 2 2.378E-05 12525 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 137.42 115.98 449520000 22216000 214490000 0 5765100 12945000 18843000 22906000 0 17837000 16960000 0 24721000 16620000 24028000 52193000 36809 4035 32837 306694;306695;306696;306697;306698;306699;306700;306701;306702;306703;306704;306705 242797;242798;242799;242800;242801;242802;242803;242804;242805;242806;242807 242801 10 NAQEALQAIETK Unmodified 1314.6779 0.67794416 344 O43592 XPOT Exportin-T yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 58.725 57.393 2 4.7605E-24 74227 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 199.68 160.66 1077500000 8827500 879790000 7658400 9038600 6762300 19944000 9616900 13299000 5688000 14641000 21460000 10820000 22261000 15452000 32206000 36810 344 32838 306706;306707;306708;306709;306710;306711;306712;306713;306714;306715;306716;306717;306718;306719;306720;306721 242808;242809;242810;242811;242812;242813;242814;242815;242816;242817;242818;242819;242820;242821;242822 242810 13 NAQELLGPRPGLR Unmodified 1419.7946 0.79464568 904 P0CW18 PRSS56 Serine protease 56 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 51.196 51.423 3 1.3729E-11 56871 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 119.45 109.12 193050000 0 0 0 12611000 0 17836000 0 13552000 11215000 21145000 15637000 29287000 11407000 27646000 32712000 36811 904 32839 306722;306723;306724;306725;306726;306727;306728;306729;306730;306731 242823;242824;242825;242826;242827;242828;242829;242830;242831 242824 7 NAQLELK Unmodified 814.45487 0.45486751 4035 Q99615 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.06 2.58 2 15 1 1 2 2 1 1 2 1 1 1 1 1 1 1 29.134 28.62 2 0.021005 31366 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 107.43 42.626 798870000 11468000 278940000 0 37581000 30285000 29721000 27909000 41154000 25325000 54050000 47675000 42900000 45446000 48052000 78360000 36812 4035 32840 306732;306733;306734;306735;306736;306737;306738;306739;306740;306741;306742;306743;306744;306745;306746;306747;306748 242832;242833;242834;242835;242836;242837;242838;242839;242840;242841;242842 242834 11 NAQLELKK Unmodified 942.54983 0.54983053 4035 Q99615 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 0 0 1 By MS/MS 3 0 1 1 23.53 19.568 2 0.045194 24429 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 98.997 41.533 6667600 0 6667600 0 0 0 0 0 0 0 0 0 0 0 0 0 36813 4035 32841 306749 242843 242843 1 NAQLNIELEAAHH Unmodified 1458.7215 0.72154031 1481 P43490 NAMPT Nicotinamide phosphoribosyltransferase yes yes 0 0 0 By MS/MS By MS/MS 2.67 0.471 1 2 1 2 63.45 58.163 3 0.00063857 58016 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 68.069 62.753 71842000 2980700 68861000 0 0 0 0 0 0 0 0 0 0 0 0 0 36814 1481 32842 306750;306751;306752 242844;242845 242845 1 NAQLQSLELAHADQLTK Unmodified 1878.9799 0.97993984 472 O75179 ANKRD17 Ankyrin repeat domain-containing protein 17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 69.209 69.045 3 0.00025463 78989 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.307 51.514 172830000 0 0 14190000 6600200 8440200 11150000 11038000 11653000 11160000 18542000 14278000 15642000 11031000 16901000 22201000 36815 472 32843 306753;306754;306755;306756;306757;306758;306759;306760;306761;306762;306763;306764;306765 242846;242847;242848;242849;242850;242851;242852;242853;242854;242855;242856;242857;242858 242856 13 NAQNPSLHHPR Unmodified 1269.6327 0.63266573 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 1 2 1 1 1 2 1 2 2 2 2 7.3158 7.4634 2;3 0.00067214 4387 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 61.344 35.405 240600000 0 0 0 9620700 11180000 15040000 13556000 642260 1199500 22945000 47456000 25581000 29900000 25742000 37735000 36816 619 32844 306766;306767;306768;306769;306770;306771;306772;306773;306774;306775;306776;306777;306778;306779;306780;306781;306782;306783 242859;242860;242861;242862;242863;242864;242865;242866;242867;242868;242869;242870;242871;242872 242867 14 NAREAHSQIEK Unmodified 1281.6426 0.64256171 143 O00327 ARNTL Aryl hydrocarbon receptor nuclear translocator-like protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 6.6371 3.2049 2 1.7679E-15 6210 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 160.77 97.29 17254000 17254000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36817 143 32845 306784 242873 242873 1 NARPEDLMNMQHCNLLCLPENYQMK 3 Oxidation (M) 3166.3763 0.37626467 1435 P41227 NAA10 N-alpha-acetyltransferase 10 yes yes 0 3 1 By MS/MS 10 0 1 1 70.889 71.238 3 1.6127E-27 81927 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 84.933 84.301 17111000 0 0 0 0 0 0 0 0 0 0 0 17111000 0 0 0 36818 1435 32846 306785 242874 242874 2254;2255;2256 1 NARQWTEK Unmodified 1031.5148 0.514842 4547 Q9NPD8 UBE2T Ubiquitin-conjugating enzyme E2 T yes yes 0 0 1 By MS/MS 2 0 1 1 14.291 10.243 2 0.033619 15340 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 141.93 81.453 229670000 229670000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36819 4547 32847 306786 242875 242875 0 NASDMPETITSR Oxidation (M) 1336.5929 0.59289391 3491 Q8TCT9 HM13 Minor histocompatibility antigen H13 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 16 2 2 2 2 1 2 2 1 1 1 24.012 24.185 2 0.0010503 26129 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 66.595 51.445 68540000 0 0 0 12141000 7112800 6388100 7023300 0 0 2806300 8540200 11181000 6249700 4013100 3084300 36820 3491 32848 306787;306788;306789;306790;306791;306792;306793;306794;306795;306796;306797;306798;306799;306800;306801;306802 242876;242877;242878;242879;242880;242881;242882;242883;242884 242876 5012 8 NASDMPETITSR Unmodified 1320.598 0.59797928 3491 Q8TCT9 HM13 Minor histocompatibility antigen H13 yes yes 0 0 0 By MS/MS 10 0 1 1 39.661 40.413 2 0.015912 44468 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.39 45.797 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36821 3491 32848 306803 242885 242885 1 NASEDEIK Unmodified 904.41379 0.41379055 4035 Q99615 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 8.9265 8.5117 2 0.012704 9264 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.997 26.858 54420000 10149000 21058000 0 0 1336600 2826900 2341900 1881500 2389700 1534200 3802500 1930400 1354000 1210100 2604300 36822 4035 32849 306804;306805;306806;306807;306808;306809;306810;306811;306812;306813;306814;306815;306816 242886;242887;242888 242887 3 NASEDEIKK Unmodified 1032.5088 0.50875357 4035 Q99615 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 7.9684 4.555 2 0.020204 6462 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 98.629 69.48 294350000 58508000 235840000 0 0 0 0 0 0 0 0 0 0 0 0 0 36823 4035 32850 306817;306818;306819 242889;242890;242891 242890 2 NASEDNHSENTLYSNDNGSNLQR Unmodified 2578.0916 0.091628152 3424 Q8NEF9 SRFBP1 Serum response factor-binding protein 1 yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 34.512 34.577 3 0.00014936 38260 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 39.188 37.198 27464000 0 0 0 4339600 2875800 0 0 0 0 3329300 10121000 0 4217300 2580800 0 36824 3424 32851 306820;306821;306822;306823;306824;306825 242892;242893 242892 2 NASELFPAVVK Unmodified 1173.6394 0.63937381 128 O00203 AP3B1 AP-3 complex subunit beta-1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 78.788 75.195 2 0.0046267 90113 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 93.111 80.074 700100000 0 685740000 14353000 0 0 0 0 0 0 0 0 0 0 0 0 36825 128 32852 306826;306827;306828 242894;242895;242896 242895 2 NASILLEELDLEK Unmodified 1485.7926 0.79263957 472 O75179 ANKRD17 Ankyrin repeat domain-containing protein 17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 90.448 89.12 2 8.5149E-09 103304 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.86 93.421 62823000 8236700 19165000 878940 0 1672900 0 0 2063700 2122200 4909400 5675800 4122200 0 2933600 11042000 36826 472 32853 306829;306830;306831;306832;306833;306834;306835;306836;306837;306838;306839 242897;242898;242899;242900;242901;242902;242903;242904;242905;242906 242899 10 NASLQLLQK Unmodified 1013.5869 0.58694431 3156 Q86UU1 PHLDB1 Pleckstrin homology-like domain family B member 1 yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 53.463 53.602 2 0.011176 60919 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 63.21 40.139 20230000 0 0 0 0 0 0 8740800 0 0 0 0 0 0 11489000 0 36827 3156 32854 306840;306841;306842 242907;242908;242909 242907 3 NASNDIVR Unmodified 887.44609 0.44609374 4011 Q99460 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 14.258 14.533 2 0.0076382 13606 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 88.954 35.791 216530000 0 0 0 20931000 0 0 0 5656800 0 0 68096000 77102000 0 7440000 37302000 36828 4011 32855 306843;306844;306845;306846;306847;306848 242910;242911;242912 242911 2 NASNPLAHYDTTADEILQQCDGK Unmodified 2560.15 0.14999465 910 P0DN79;P35520 CBS Cystathionine beta-synthase yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.86 3.4 1 1 5 2 1 1 1 1 1 79.189 78.143 3 7.4916E-79 89905 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 144.56 141.46 104000000 0 31230000 0 0 0 9474400 0 0 0 10519000 10617000 0 0 5663000 36501000 36829 910 32856 306849;306850;306851;306852;306853;306854;306855 242913;242914;242915;242916;242917;242918 242916 6 NASPEDVEYYNCQQELTDDLHK Unmodified 2667.1395 0.13948955 199 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 71.097 70.313 3 2.3933E-61 87593 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.68 130.11 121310000 0 82472000 0 0 1688400 0 0 4879200 3097800 5013800 5691600 8738700 0 3515300 6212000 36830 199 32857 306856;306857;306858;306859;306860;306861;306862;306863;306864;306865 242919;242920;242921;242922;242923;242924;242925;242926 242921 8 NASQETVATILK Unmodified 1273.6878 0.68778057 3466 Q8NI35 INADL InaD-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 60.775 60.851 2 0.018045 69455 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 41.704 21.375 23816000 0 0 0 2667200 0 2113800 1623400 2941700 1767300 4661500 2907600 0 2547600 2586200 0 36831 3466 32858 306866;306867;306868;306869;306870;306871;306872;306873;306874 242927;242928;242929 242928 3 NASRIESLEQEK Unmodified 1402.7052 0.70522155 232 O14974 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 7.33 3.77 3 6 1 1 1 1 1 1 1 1 1 32.248 30.788 3 0.0062619 39501 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 49.423 33.286 104790000 8436100 22809000 26661000 0 0 11602000 0 6496500 4810300 8063700 5574600 0 0 0 10335000 36832 232 32859 306875;306876;306877;306878;306879;306880;306881;306882;306883 242930;242931;242932;242933 242932 4 NASSAANAQPHK Unmodified 1194.5741 0.5741478 2776 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 yes yes 0 0 0 By MS/MS 2 0 1 1 5.9671 2.7268 2 1.2728E-24 4778 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 176.78 141.35 26879000 0 26879000 0 0 0 0 0 0 0 0 0 0 0 0 0 36833 2776 32860 306884 242934 242934 1 NASSEEIQR Unmodified 1032.4836 0.48360145 4861 Q9UBU9 NXF1 Nuclear RNA export factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 9.9416 10.041 2 0.0031541 7218 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 92.439 56.559 19096000 0 0 0 2929100 1143600 1983700 2451200 1387000 0 2091400 2975400 0 1816000 0 2318600 36834 4861 32861 306885;306886;306887;306888;306889;306890;306891;306892;306893 242935;242936;242937;242938;242939;242940;242941 242938 7 NASSRPASAISGQNNNHSGNKPDPPPVLR Unmodified 2981.4816 0.4815914 2398 Q14244 MAP7 Ensconsin yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 38.922 39.101 4;5 5.097E-27 42458 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 77.873 69.001 314710000 0 0 0 15957000 14328000 26578000 22605000 19958000 17060000 38309000 32783000 39512000 19554000 18862000 49205000 36835 2398 32862 306894;306895;306896;306897;306898;306899;306900;306901;306902;306903;306904;306905;306906;306907;306908;306909;306910;306911;306912;306913;306914;306915;306916;306917 242942;242943;242944;242945;242946;242947;242948;242949;242950;242951;242952;242953;242954 242953 12 NASTFEDVTQVSSAYQK Unmodified 1873.8694 0.86938634 2399 Q14247 CTTN Src substrate cortactin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 67.374 66.699 2;3 2.9217E-41 76668 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 190.85 183.24 446490000 0 115430000 0 11817000 20036000 22732000 17256000 23847000 19258000 28904000 39362000 47359000 23848000 27215000 49418000 36836 2399 32863 306918;306919;306920;306921;306922;306923;306924;306925;306926;306927;306928;306929;306930;306931 242955;242956;242957;242958;242959;242960;242961;242962;242963;242964;242965;242966;242967;242968 242956 12 NASTVVVSDK Unmodified 1018.5295 0.52948901 3955 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 19.286 19.115 2 0.0026033 19833 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 81.95 48.308 498250000 0 37733000 0 26172000 27247000 31137000 33939000 32659000 31850000 59746000 0 61681000 50306000 44889000 60889000 36837 3955 32864 306932;306933;306934;306935;306936;306937;306938;306939;306940;306941;306942;306943 242969;242970;242971;242972;242973;242974;242975;242976;242977;242978;242979;242980;242981 242980 7 NASYYGNR Unmodified 943.41479 0.41479361 4035 Q99615 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 11.955 12.112 2 0.032055 10931 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 54.549 43.181 43737000 0 0 0 0 2427500 3789800 6337600 3686300 3050000 4572500 4854100 0 4312700 3686600 7020100 36838 4035 32865 306944;306945;306946;306947;306948;306949;306950;306951;306952;306953 242982;242983;242984 242983 2 NATDLQNSSMSEEELTK Unmodified 1895.8419 0.84185096 1421 P40855 PEX19 Peroxisomal biogenesis factor 19 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 50.27 50.987 2 8.7773E-96 57138 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 228.8 219.85 38085000 0 0 0 0 0 0 0 0 0 0 0 12878000 0 0 25207000 36839 1421 32866 306954;306955 242985;242986 242986 2 NATDLQNSSMSEEELTK Oxidation (M) 1911.8368 0.83676559 1421 P40855 PEX19 Peroxisomal biogenesis factor 19 yes yes 0 1 0 By MS/MS By matching 10 0 2 1 1 39.76 40.507 2 1.0803E-13 44721 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 93.011 87.527 11267000 0 0 0 0 0 0 0 0 0 0 0 4660600 0 0 6606500 36840 1421 32866 306956;306957 242987 242987 2237 1 NATEFDFEK Unmodified 1099.4822 0.48220447 2376 Q14149 MORC3 MORC family CW-type zinc finger protein 3 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 55.566 50.218 2 0.0089039 64732 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.819 88.819 29565000 0 29565000 0 0 0 0 0 0 0 0 0 0 0 0 0 36841 2376 32867 306958;306959 242988 242988 1 NATILELR Unmodified 928.53418 0.53418046 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.409 60.514 2 0.0015556 70066 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 149.65 94.867 610840000 0 0 0 87288000 28391000 26611000 33557000 139740000 24374000 33072000 47009000 68797000 63617000 27726000 30664000 36842 1029 32868 306960;306961;306962;306963;306964;306965;306966;306967;306968;306969;306970;306971 242989;242990;242991;242992;242993;242994;242995;242996;242997;242998;242999;243000 242999 8 NATLLFPESIR Unmodified 1259.6874 0.68738664 2843 Q66K14 TBC1D9B TBC1 domain family member 9B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.684 80.744 2 0.00033962 93725 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 99.815 79.295 65867000 0 0 0 2901400 2890600 5367000 4683700 6808500 4287900 8325800 5636200 6078700 3364800 5369900 10152000 36843 2843 32869 306972;306973;306974;306975;306976;306977;306978;306979;306980;306981;306982;306983 243001;243002;243003;243004;243005;243006;243007;243008;243009;243010 243007 10 NATLSQVLR Unmodified 1000.5665 0.56654322 4616 Q9NRY5 FAM114A2 Protein FAM114A2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 53.072 53.211 2 0.0035983 59327 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 89.542 54.048 327190000 0 0 0 25621000 17277000 33983000 26747000 26079000 0 0 35337000 36459000 58367000 30112000 37209000 36844 4616 32870 306984;306985;306986;306987;306988;306989;306990;306991;306992;306993;306994 243011;243012;243013;243014;243015;243016;243017;243018;243019;243020 243017 8 NATMPVTMLIR Unmodified 1245.6573 0.65734884 4978 Q9UKX7 NUP50 Nuclear pore complex protein Nup50 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 81.827 81.953 2 0.00093347 94394 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.228 46.043 36508000 0 0 0 0 0 4709700 0 4144100 1573800 4448700 0 0 1570600 5123800 14937000 36845 4978 32871 306995;306996;306997;306998;306999;307000;307001;307002;307003;307004 243021;243022;243023;243024;243025;243026;243027 243022 6 NATMPVTMLIR Oxidation (M) 1261.6523 0.65226346 4978 Q9UKX7 NUP50 Nuclear pore complex protein Nup50 yes yes 0 1 0 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 73.536 73.753 2 0.0089962 84350 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.334 29.558 24390000 0 0 0 0 0 0 0 0 1989000 5830200 4576900 0 0 0 11994000 36846 4978 32871 307005;307006;307007;307008 243028 243028 6324 1 NATNVEQAFMTMAAEIK 2 Oxidation (M) 1899.8706 0.87064867 4338 Q9H0U4;Q92928 RAB1B;RAB1C Ras-related protein Rab-1B;Putative Ras-related protein Rab-1C yes no 0 2 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 2 1 1 1 2 2 2 1 1 75.638 75.748 2;3 1.5889E-52 87422 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 158.58 15.746 172310000 0 0 0 5931000 0 19339000 8389300 11950000 6554000 30254000 35417000 27747000 0 12144000 14581000 36847 4338 32872 307009;307010;307011;307012;307013;307014;307015;307016;307017;307018;307019;307020;307021;307022 243029;243030;243031;243032;243033;243034;243035;243036 243036 5801;5802 8 NATNVEQAFMTMAAEIK Oxidation (M) 1883.8757 0.87573405 4338 Q9H0U4;Q92928 RAB1B;RAB1C Ras-related protein Rab-1B;Putative Ras-related protein Rab-1C yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 2 1 1 1 1 1 90.446 89.758 2;3 1.3262E-55 106225 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 148.68 17.551 63111000 0 45509000 1891500 0 0 0 0 1553300 0 3618500 2135200 1423100 0 815690 6163900 36848 4338 32872 307023;307024;307025;307026;307027;307028;307029;307030;307031 243037;243038;243039;243040 243039 5801;5802 1 NATNVEQAFMTMAAEIK Unmodified 1867.8808 0.88081943 4338 Q9H0U4;Q92928 RAB1B;RAB1C Ras-related protein Rab-1B;Putative Ras-related protein Rab-1C yes no 0 0 0 By MS/MS 2 0 2 2 99.404 94.68 2;3 3.837E-70 116857 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 167.29 154.79 99370000 0 99370000 0 0 0 0 0 0 0 0 0 0 0 0 0 36849 4338 32872 307032;307033 243041;243042 243041 2 NATNVEQSFMTMAAEIK 2 Oxidation (M) 1915.8656 0.86556329 1911 P62820 RAB1A Ras-related protein Rab-1A yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.71 1.48 1 27 1 2 2 2 2 3 2 3 2 2 2 2 3 69.375 69.283 2;3 6.0066E-230 79960 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 232.6 222.41 655580000 0 30724000 0 23610000 26749000 43879000 45605000 59764000 39035000 85863000 75506000 66262000 47415000 40873000 70299000 36850 1911 32873 307034;307035;307036;307037;307038;307039;307040;307041;307042;307043;307044;307045;307046;307047;307048;307049;307050;307051;307052;307053;307054;307055;307056;307057;307058;307059;307060;307061 243043;243044;243045;243046;243047;243048;243049;243050;243051;243052;243053;243054;243055;243056;243057;243058;243059;243060;243061;243062;243063;243064;243065;243066;243067;243068;243069;243070;243071 243046 3086;3087 26 NATNVEQSFMTMAAEIK Oxidation (M) 1899.8706 0.87064867 1911 P62820 RAB1A Ras-related protein Rab-1A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.58 3 5 2 31 6 1 2 2 3 3 3 3 3 3 3 3 3 82.674 82.031 2;3 6.1446E-96 105337 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 206.18 33.848 625040000 0 348700000 2039300 0 8765700 8991700 8963600 19364000 15563000 44825000 39400000 34882000 12646000 18894000 62003000 36851 1911 32873 307062;307063;307064;307065;307066;307067;307068;307069;307070;307071;307072;307073;307074;307075;307076;307077;307078;307079;307080;307081;307082;307083;307084;307085;307086;307087;307088;307089;307090;307091;307092;307093;307094;307095;307096;307097;307098;307099 243072;243073;243074;243075;243076;243077;243078;243079;243080;243081;243082;243083;243084;243085;243086;243087;243088;243089;243090;243091;243092;243093;243094;243095;243096;243097;243098 243078 3086;3087 25 NATNVEQSFMTMAAEIK Unmodified 1883.8757 0.87573405 1911 P62820 RAB1A Ras-related protein Rab-1A yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 95.765 91.72 2;3 8.0495E-19 113625 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.569 20.141 391310000 0 389760000 1549300 0 0 0 0 0 0 0 0 0 0 0 0 36852 1911 32873 307100;307101;307102 243099;243100;243101 243100 3 NATNVEQSFMTMAAEIKK 2 Oxidation (M) 2043.9605 0.96052631 1911 P62820 RAB1A Ras-related protein Rab-1A yes yes 0 2 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 61.866 61.724 3 0.00043633 70278 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 40.085 35.083 19475000 0 0 0 4165300 0 0 8878100 0 0 6431800 0 0 0 0 0 36853 1911 32874 307103;307104;307105 243102 243102 3086;3087 1 NATNVEQSFMTMAAEIKK Unmodified 2011.9707 0.97069707 1911 P62820 RAB1A Ras-related protein Rab-1A yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 93.089 86.568 3 0.0015112 109655 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 46.027 16.901 45256000 22743000 22514000 0 0 0 0 0 0 0 0 0 0 0 0 0 36854 1911 32874 307106;307107 243103;243104;243105 243103 2 NATQEAVAALLK Unmodified 1227.6823 0.68230126 568 O75970 MPDZ Multiple PDZ domain protein yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 78.36 78.493 2 0.020982 90687 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 58.63 43.96 20492000 0 0 0 0 0 2882300 1735200 2693600 1393700 2753600 2882100 2216000 1957000 1978100 0 36855 568 32875 307108;307109;307110;307111;307112;307113;307114;307115;307116 243106 243106 0 NATRESTSTLK Unmodified 1206.6204 0.62042929 1983 P78415;P78414 IRX3;IRX1 Iroquois-class homeodomain protein IRX-3;Iroquois-class homeodomain protein IRX-1 yes no 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 9.1709 6.1661 2 0.031886 10448 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.378 30.931 10700000 7699800 0 3000700 0 0 0 0 0 0 0 0 0 0 0 0 36856 1983 32876 307117;307118 243107 243107 1 NATSLQHLLSGAK Unmodified 1338.7256 0.72556306 2895 Q6N069 NAA16 N-alpha-acetyltransferase 16, NatA auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 4 1 1 2 61.16 61.527 2;3 0.0018347 70045 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 56.482 47.752 71928000 0 0 0 0 0 0 0 0 0 3654200 4911700 63362000 0 0 0 36857 2895 32877 307119;307120;307121;307122 243108;243109 243109 2 NATVEMTRR Unmodified 1076.5397 0.53967654 2579 Q15796 SMAD2 Mothers against decapentaplegic homolog 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.333 13.488 2 0.025106 12518 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 91.9 64.646 38074000 0 0 0 2195700 2591400 2731700 2824200 2721200 1292400 2870100 4213300 4323300 2872700 2520500 6917700 36858 2579 32878 307123;307124;307125;307126;307127;307128;307129;307130;307131;307132;307133;307134 243110 243110 1 NATVHPGLELPLMMAK Unmodified 1720.9004 0.90043266 2413 Q14558 PRPSAP1 Phosphoribosyl pyrophosphate synthase-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 91.974 84.917 2;3 0.0001255 108852 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.222 70.642 171450000 130690000 40758000 0 0 0 0 0 0 0 0 0 0 0 0 0 36859 2413 32879 307135;307136;307137 243111;243112;243113;243114 243113 4 NATVHPGLELPLMMAK 2 Oxidation (M) 1752.8903 0.8902619 2413 Q14558 PRPSAP1 Phosphoribosyl pyrophosphate synthase-associated protein 1 yes yes 0 2 0 By MS/MS 2 0 2 2 79.429 71.299 2;3 0.0014372 93769 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.148 57.148 93881000 93881000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36860 2413 32879 307138;307139 243115;243116 243116 3966;3967 1 NATVHPGLELPLMMAK Oxidation (M) 1736.8953 0.89534728 2413 Q14558 PRPSAP1 Phosphoribosyl pyrophosphate synthase-associated protein 1 yes yes 0 1 0 By MS/MS 2 0 1 1 86.309 78.179 3 0.00048024 101925 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.307 49.045 81318000 81318000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36861 2413 32879 307140 243117 243117 3966;3967 1 NAVALSASPQLK Unmodified 1197.6717 0.67173657 3621 Q92547 TOPBP1 DNA topoisomerase 2-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 50.893 50.951 2 0.0017198 57284 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 78.655 64.88 100110000 0 0 0 11883000 12828000 0 9232600 0 0 14124000 14463000 0 0 13849000 23736000 36862 3621 32880 307141;307142;307143;307144;307145;307146;307147;307148;307149;307150;307151;307152 243118;243119;243120;243121;243122;243123;243124;243125;243126;243127;243128;243129 243123 12 NAVASVQNGPGGGPSSSSIGSASK Unmodified 2115.0192 0.019238477 3465 Q8NI27 THOC2 THO complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 41.221 41.398 2;3 1.3124E-21 45214 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.72 77.971 234810000 0 0 0 14088000 14407000 17076000 13451000 15081000 12402000 22974000 26773000 25576000 21348000 23116000 28515000 36863 3465 32881 307153;307154;307155;307156;307157;307158;307159;307160;307161;307162;307163;307164;307165;307166;307167;307168;307169;307170;307171;307172;307173;307174;307175;307176 243130;243131;243132;243133;243134;243135;243136;243137;243138;243139;243140;243141;243142;243143;243144;243145 243134 16 NAVEEYVYDFR Unmodified 1403.6357 0.635745 686 O95757 HSPA4L Heat shock 70 kDa protein 4L yes yes 0 0 0 By MS/MS 10 0 1 1 78.122 78.387 2 0.00036177 90203 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.913 75.687 10486000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10486000 36864 686 32882 307177 243146 243146 1 NAVEEYVYEFRDK Unmodified 1660.7733 0.77330111 3633 Q92598 HSPH1 Heat shock protein 105 kDa yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 3.23 5 2 2 2 3 2 1 1 78.539 75.257 2;3 3.5402E-20 94220 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.3 115.06 752780000 171630000 502040000 57503000 0 0 0 0 0 0 0 0 0 0 2872400 18733000 36865 3633 32883 307178;307179;307180;307181;307182;307183;307184;307185;307186 243147;243148;243149;243150;243151;243152;243153;243154 243147 6 NAVEEYVYEMR Oxidation (M) 1417.6184 0.61838038 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 55.74 55.95 2 0.00039447 63297 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 79.974 63.771 93799000 0 0 0 0 2607100 3857600 0 3717000 0 4658200 18328000 20605000 0 8925500 31101000 36866 1337 32884 307187;307188;307189;307190;307191;307192;307193;307194 243155;243156;243157;243158;243159;243160;243161;243162 243158 2018 8 NAVEEYVYEMR Unmodified 1401.6235 0.62346575 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 74.174 73.437 2 0.002981 84159 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.098 69.877 129150000 0 19003000 0 0 0 0 0 0 0 0 17808000 15765000 0 13736000 62837000 36867 1337 32884 307195;307196;307197;307198;307199 243163;243164 243164 2 NAVEEYVYEMRDK Unmodified 1644.7454 0.7453718 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 7 2 2 3 75.662 70.707 2;3 1.3289E-41 89542 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 205.13 183.14 809110000 169810000 524950000 114350000 0 0 0 0 0 0 0 0 0 0 0 0 36868 1337 32885 307200;307201;307202;307203;307204;307205;307206 243165;243166;243167;243168;243169;243170;243171 243166 5 NAVEEYVYEMRDK Oxidation (M) 1660.7403 0.74028642 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2.33 0.471 2 1 1 1 1 55.875 50.214 3 0.00085896 62289 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 87.498 75.73 367370000 42803000 51024000 273540000 0 0 0 0 0 0 0 0 0 0 0 0 36869 1337 32885 307207;307208;307209 243172;243173;243174;243175;243176 243173 2018 4 NAVFTQVYEGLK Unmodified 1367.7085 0.70851601 2774 Q5T447 HECTD3 E3 ubiquitin-protein ligase HECTD3 yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 83.243 76.825 2 0.0058027 95740 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.434 54.525 51359000 30431000 20928000 0 0 0 0 0 0 0 0 0 0 0 0 0 36870 2774 32886 307210;307211 243177 243177 1 NAVGVPIK Unmodified 796.48069 0.48068833 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 37.043 37.414 2 0.023059 40078 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.648 21.812 145950000 0 0 0 0 0 1099300 0 0 0 0 37472000 0 35835000 30334000 41208000 36871 3023 32887 307212;307213;307214;307215;307216 243178;243179 243178 2 NAVIRDLGK Unmodified 984.57163 0.5716286 3134 Q86TC9 MYPN Myopalladin yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29.692 29.049 2 1.7701E-05 43218 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 168.26 119.16 390050000 179530000 16775000 0 7656700 13231000 12544000 18324000 11730000 15011000 20069000 22477000 17503000 14441000 15725000 25038000 36872 3134 32888 307217;307218;307219;307220;307221;307222;307223;307224;307225;307226;307227;307228;307229;307230 243180;243181;243182 243180 2 NAVITVPAYFNDSQR Unmodified 1693.8424 0.84238373 1399 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.15 79.209 2 1.7098E-70 91575 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 180.2 154.08 355720000 0 0 0 11312000 15002000 25582000 20682000 20993000 15149000 37649000 38442000 42652000 21129000 33494000 73637000 36873 1399 32889 307231;307232;307233;307234;307235;307236;307237;307238;307239;307240;307241;307242 243183;243184;243185;243186;243187;243188;243189;243190;243191;243192;243193;243194 243184 11 NAVITVPAYFNDSQRQATK Unmodified 2122.0807 0.080716522 1399 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 77.07 73.463 3 0.00064886 94283 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.536 48.731 114800000 104690000 0 10112000 0 0 0 0 0 0 0 0 0 0 0 0 36874 1399 32890 307243;307244;307245 243195;243196 243195 2 NAVIVALSSK Unmodified 1000.5917 0.59169534 1832 P61086 UBE2K Ubiquitin-conjugating enzyme E2 K yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.686 55.815 2 0.011537 63649 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 54.066 23.899 250350000 0 0 0 13097000 9481000 29417000 20344000 15270000 7979200 30856000 26096000 23721000 14973000 16585000 42532000 36875 1832 32891 307246;307247;307248;307249;307250;307251;307252;307253;307254;307255;307256;307257 243197;243198;243199;243200;243201;243202;243203;243204;243205;243206;243207;243208 243204 11 NAVLAIYTIYR Unmodified 1295.7238 0.72377215 1720 P53618 COPB1 Coatomer subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 84.093 84.224 2 0.0077486 97211 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.353 49.64 21612000 0 0 0 0 0 0 0 0 0 5923600 0 3769600 0 3366300 8552400 36876 1720 32892 307258;307259;307260;307261 243209;243210 243210 2 NAVLGLPVALQDK Unmodified 1336.7715 0.77145062 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 82.354 82.162 2 5.6287E-07 95022 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 113.63 113.63 186370000 0 6346100 0 5933600 9283700 13435000 11097000 9919300 9537300 18943000 18627000 21720000 12662000 16814000 32054000 36877 2193 32893 307262;307263;307264;307265;307266;307267;307268;307269;307270;307271;307272;307273;307274 243211;243212;243213;243214;243215;243216;243217;243218;243219;243220;243221;243222;243223 243212 13 NAVPITPTLNR Unmodified 1194.6721 0.67207093 60 CON__P02663 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 57.139 57.259 2 0.004546 65118 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 59.153 51.673 + 267320000 0 0 0 28774000 39096000 37881000 32829000 19165000 12766000 14190000 26989000 20221000 12921000 9356300 13131000 36878 60 32894 307275;307276;307277;307278;307279;307280;307281;307282;307283;307284;307285;307286 243224;243225;243226;243227;243228;243229;243230;243231;243232 243224 9 NAVQQLHK Unmodified 936.51411 0.51411372 3082 Q7Z3E2 CCDC186 Coiled-coil domain-containing protein 186 yes yes 0 0 0 By MS/MS 2 0 1 1 14.867 10.819 2 0.023523 16132 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.305 31.602 21589000 21589000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36879 3082 32895 307287 243233 243233 1 NAVTQEFGPVPDTAR Unmodified 1600.7845 0.7845345 4061 Q99798 ACO2 Aconitate hydratase, mitochondrial yes yes 0 0 0 By MS/MS 10 0 1 1 62.6 63.172 2 0.00032904 71477 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.633 64.043 8721400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8721400 36880 4061 32896 307288 243234 243234 1 NCAAYLK Unmodified 838.40072 0.40072345 1356;1357;1366;3090 P35579;Q7Z406;P35580;P35749 MYH9;MYH14;MYH10;MYH11 Myosin-9;Myosin-14;Myosin-10;Myosin-11 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.76 20.965 2 0.023406 21551 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 86.838 58.309 604380000 0 0 0 29041000 40942000 34494000 41502000 34917000 31106000 52106000 69358000 85883000 62143000 66413000 56477000 36881 1356;3090;1357;1366 32897 307289;307290;307291;307292;307293;307294;307295;307296;307297;307298;307299;307300 243235;243236;243237;243238;243239;243240;243241;243242 243241 7 NCAILIENDQSISR Unmodified 1631.7937 0.79371898 448 O60934 NBN Nibrin yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 61.599 61.437 2 0.00055885 69377 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 67.022 46.245 6432400 0 0 0 0 2310400 0 0 0 0 0 0 0 0 4122000 0 36882 448 32898 307301;307302;307303;307304 243243;243244;243245 243244 3 NCASPSAASQLILPDSMK Unmodified 1888.9023 0.90228315 593 O94855 SEC24D Protein transport protein Sec24D yes yes 0 0 0 By MS/MS 2 0 1 1 80.937 76.232 2 1.2967E-09 94844 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.09 107.32 51286000 0 51286000 0 0 0 0 0 0 0 0 0 0 0 0 0 36883 593 32899 307305 243246 243246 1 NCAVEFNFGQR Unmodified 1340.5932 0.59316868 4162 Q9BUJ2 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 65.944 66.097 2 0.0026818 74993 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.568 60.836 55619000 0 0 0 0 2241700 4009100 2032300 3338200 3417200 5164300 7232500 5505900 4060800 5058100 13560000 36884 4162 32900 307306;307307;307308;307309;307310;307311;307312;307313;307314;307315;307316 243247;243248;243249;243250;243251;243252;243253 243248 7 NCDVFDPVTK Unmodified 1193.5387 0.53867349 5300 Q9Y6Y0 IVNS1ABP Influenza virus NS1A-binding protein yes yes 0 0 0 By MS/MS 2 0 1 1 57.233 51.411 2 0.0090275 66176 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.192 61.31 44468000 0 44468000 0 0 0 0 0 0 0 0 0 0 0 0 0 36885 5300 32901 307317 243254 243254 1 NCEEVGLFNELASSFEHEFK Unmodified 2385.0583 0.0583261 1055 P17544 ATF7 Cyclic AMP-dependent transcription factor ATF-7 yes yes 0 0 0 By MS/MS 3 0 1 1 99.202 95.851 3 1.2459E-08 115000 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 75.589 72.35 4265400 0 4265400 0 0 0 0 0 0 0 0 0 0 0 0 0 36886 1055 32902 307318 243255 243255 1 NCGCLGASPNLEQLQEENLK Unmodified 2273.0416 0.041630178 1733 P54136 RARS Arginine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS 2.4 0.49 3 2 1 4 78.599 73.711 2;3 7.9142E-86 92250 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 194.59 188.7 925880000 13949000 911930000 0 0 0 0 0 0 0 0 0 0 0 0 0 36887 1733 32903 307319;307320;307321;307322;307323 243256;243257;243258;243259;243260 243257 4 NCGEMSEIEAK Unmodified 1266.522 0.52203715 5201 Q9Y4G6 TLN2 Talin-2 yes yes 0 0 0 By MS/MS 2 0 1 1 36.295 31.448 2 0.038405 41293 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.933 59.264 10955000 0 10955000 0 0 0 0 0 0 0 0 0 0 0 0 0 36888 5201 32904 307324 243261 243261 1 NCGGDAIQEDLK Unmodified 1318.5823 0.58232922 2833 Q5VZK9 LRRC16A Leucine-rich repeat-containing protein 16A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 38.305 38.565 2 0.0074606 43061 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 50.108 35.434 32651000 0 0 0 0 3778900 3977700 0 3161700 0 4246900 5529000 5803200 0 0 6153400 36889 2833 32905 307325;307326;307327;307328;307329;307330;307331 243262;243263;243264;243265;243266;243267 243262 6 NCGQEPTLK Unmodified 1045.4862 0.48624399 3756 Q96BD8 SKA1 Spindle and kinetochore-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 17.346 17.645 2 0.0051099 16670 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.313 42.461 22612000 0 0 0 0 0 2368700 0 0 0 3363400 5224000 0 0 5961700 5694700 36890 3756 32906 307332;307333;307334;307335;307336 243268;243269 243269 2 NCGQMSEIEAK Oxidation (M) 1281.5329 0.53293619 5187 Q9Y490 TLN1 Talin-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 2 1 2 1 1 1 13.918 13.43 2 1.3083E-16 15505 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 169.09 161.26 68567000 7087400 30051000 0 0 0 3406800 1811100 2165800 0 4122300 3061100 4281200 4074900 3690700 4814300 36891 5187 32907 307337;307338;307339;307340;307341;307342;307343;307344;307345;307346;307347;307348;307349 243270;243271;243272;243273;243274;243275;243276;243277;243278;243279 243273 6566 10 NCGQMSEIEAK Unmodified 1265.538 0.53802156 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 28.472 28.309 2 5.4162E-05 30131 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 134.25 96.688 308730000 0 176960000 0 5348800 6790300 14549000 7464100 6025200 4771400 12570000 15251000 11966000 8495100 12815000 25724000 36892 5187 32907 307350;307351;307352;307353;307354;307355;307356;307357;307358;307359;307360;307361;307362 243280;243281;243282;243283;243284;243285;243286;243287;243288;243289;243290;243291;243292 243290 13 NCGQTVHDEVANK Unmodified 1470.6521 0.65214012 230 O14964 HGS Hepatocyte growth factor-regulated tyrosine kinase substrate yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.65 1.53 1 19 1 1 1 1 2 2 2 2 1 1 2 2 2 13.163 13.146 2;3 0.0038152 11921 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 48.044 42.202 150490000 0 20671000 0 7605900 3648100 8256000 6438300 5393700 8227500 17602000 11595000 14630000 15073000 10747000 20597000 36893 230 32908 307363;307364;307365;307366;307367;307368;307369;307370;307371;307372;307373;307374;307375;307376;307377;307378;307379;307380;307381;307382 243293;243294;243295;243296;243297;243298;243299;243300;243301 243297 9 NCHLNENIEK Unmodified 1269.5772 0.57718426 2356 Q13907;Q9BXS1 IDI1;IDI2 Isopentenyl-diphosphate Delta-isomerase 1;Isopentenyl-diphosphate delta-isomerase 2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.33 3.93 6 1 8 2 3 2 1 1 1 1 1 1 1 1 20.61 18.9 2;3 1.168E-05 25473 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 144.77 124.98 1574500000 48008000 1071900000 395890000 1803200 951790 0 0 670360 0 1544000 7887300 11125000 0 5741300 28931000 36894 2356 32909 307383;307384;307385;307386;307387;307388;307389;307390;307391;307392;307393;307394;307395;307396;307397 243302;243303;243304;243305;243306;243307;243308;243309 243302 5 NCIDITGVR Unmodified 1046.5179 0.51787847 2208 Q12907 LMAN2 Vesicular integral-membrane protein VIP36 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.143 48.306 2 0.0030604 54237 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 91.853 46.772 209890000 0 0 0 11228000 7585800 18492000 10846000 9800800 12994000 16860000 19744000 30922000 26113000 16054000 29253000 36895 2208 32910 307398;307399;307400;307401;307402;307403;307404;307405;307406;307407;307408;307409 243310;243311;243312;243313;243314;243315;243316;243317;243318;243319;243320 243311 11 NCIGDFLK Unmodified 965.46405 0.46405199 3170 Q86VP6 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 68.271 67.232 2 0.0060247 76884 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 104.37 81.436 247240000 55883000 0 18833000 7830600 0 22633000 0 0 0 16917000 22127000 22292000 14721000 19510000 46498000 36896 3170 32911 307410;307411;307412;307413;307414;307415;307416;307417;307418;307419 243321;243322;243323;243324;243325;243326 243325 6 NCIIVSPDAGGAK Unmodified 1300.6445 0.64453555 957 P11908 PRPS2 Ribose-phosphate pyrophosphokinase 2 no no 0 0 0 By MS/MS 2 0 2 2 49.632 43.926 2 2.9309E-08 57230 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.95 88.681 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36897 957 32912 307420;307421 243327;243328 243328 2 NCIVLIDSTPYR Unmodified 1449.7286 0.72859953 1877 P62241 RPS8 40S ribosomal protein S8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 75.012 75.03 2 0.0030771 86567 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 72.006 61.482 33887000 0 0 0 2883000 0 5693300 0 0 4746600 0 4675200 15889000 0 0 0 36898 1877 32913 307422;307423;307424;307425;307426 243329;243330;243331;243332 243329 4 NCLLETAK Unmodified 947.47462 0.47461667 455 O75116 ROCK2 Rho-associated protein kinase 2 yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 36.28 32.151 2 0.012181 42423 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.75 88.192 187310000 0 185130000 2182100 0 0 0 0 0 0 0 0 0 0 0 0 36899 455 32914 307427;307428 243333;243334 243334 2 NCLNPQFSK Unmodified 1106.5179 0.51787847 458 O75131 CPNE3 Copine-3 yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 40.112 34.266 2 0.024368 44831 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.19 86.749 102620000 3774900 98842000 0 0 0 0 0 0 0 0 0 0 0 0 0 36900 458 32915 307429;307430 243335 243335 0 NCLTNFHGMDLTR Unmodified 1577.7079 0.70788086 1842 P61247 RPS3A 40S ribosomal protein S3a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.945 67.028 3 0.00035405 76004 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 68.513 63.799 78301000 0 0 0 2344900 2322700 5751300 2404500 5735200 3840700 4826600 5479600 10989000 6208200 9066500 19332000 36901 1842 32916 307431;307432;307433;307434;307435;307436;307437;307438;307439;307440;307441;307442 243336;243337;243338;243339 243339 4 NCLTNFHGMDLTR Oxidation (M) 1593.7028 0.70279548 1842 P61247 RPS3A 40S ribosomal protein S3a yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 49.519 49.597 3 0.0014865 54884 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.31 36.683 136500000 0 0 0 28264000 0 20343000 31362000 0 0 29060000 0 0 0 0 27471000 36902 1842 32916 307443;307444;307445;307446;307447 243340;243341 243341 2994 1 NCLTNFHGMDLTRDK Unmodified 1820.8298 0.82978691 1842 P61247 RPS3A 40S ribosomal protein S3a yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 70.294 63.226 4 0.042001 83787 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 32.815 24.474 39889000 15574000 24315000 0 0 0 0 0 0 0 0 0 0 0 0 0 36903 1842 32917 307448;307449 243342 243342 1 NCLTNFHGMDLTRDK Oxidation (M) 1836.8247 0.82470153 1842 P61247 RPS3A 40S ribosomal protein S3a yes yes 0 1 1 By MS/MS 2 0 1 1 53.902 45.839 3 0.024294 62999 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.54 39.718 27118000 27118000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36904 1842 32917 307450 243343 243343 2994 0 NCLVYSIPTNSSK Unmodified 1481.7184 0.71842877 311 O43264 ZW10 Centromere/kinetochore protein zw10 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 66.087 60.17 2 1.6086E-21 76866 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145.46 130.31 107890000 0 107890000 0 0 0 0 0 0 0 0 0 0 0 0 0 36905 311 32918 307451 243344;243345 243344 2 NCMTDLLAK Unmodified 1064.4995 0.49945121 2044 Q00765 REEP5 Receptor expression-enhancing protein 5 yes yes 0 0 0 By MS/MS 2 0 1 1 68.454 62.555 2 0.01606 79925 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.438 67.45 49638000 0 49638000 0 0 0 0 0 0 0 0 0 0 0 0 0 36906 2044 32919 307452 243346 243346 1 NCNDFQYESK Unmodified 1303.5139 0.5139153 2109 Q04917 YWHAH 14-3-3 protein eta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 27.643 26.461 2 0.0014446 28735 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 92.051 87.636 249320000 23806000 182730000 0 0 1473900 0 0 0 0 0 8972300 7620200 0 7493200 17225000 36907 2109 32920 307453;307454;307455;307456;307457;307458;307459;307460 243347;243348;243349;243350;243351;243352;243353;243354 243352 8 NCPHIVVGTPGR Unmodified 1305.6612 0.66118866 2347 Q13838 DDX39B Spliceosome RNA helicase DDX39B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 2 1 1 1 36.654 37.148 2;3 0.00027479 40887 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 61.03 54.594 130540000 0 0 0 0 0 0 0 0 11490000 0 24912000 40125000 23702000 23420000 6887600 36908 2347 32921 307461;307462;307463;307464;307465;307466;307467 243355;243356;243357;243358;243359;243360 243357 6 NCPHVVVGTPGR Unmodified 1291.6455 0.6455386 118 O00148 DDX39A ATP-dependent RNA helicase DDX39A yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 29.999 29.993 3 0.005331 32303 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 37.793 28.281 43727000 0 0 0 7743300 5491900 0 7670700 6252100 4994300 0 0 0 11575000 0 0 36909 118 32922 307468;307469;307470;307471;307472;307473 243361 243361 1 NCSETQYESK Unmodified 1244.4979 0.49793089 1869 P61981 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.22 3.95 3 2 1 12 2 4 1 1 1 1 1 1 1 1 1 1 1 1 25.69 25.587 2 1.1597E-13 11386 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 186.16 171.49 540780000 211530000 214100000 0 3532200 3031900 4448500 4153900 2657200 2119500 4083900 28376000 16286000 4481200 8411100 33574000 36910 1869 32923 307474;307475;307476;307477;307478;307479;307480;307481;307482;307483;307484;307485;307486;307487;307488;307489;307490;307491 243362;243363;243364;243365;243366;243367;243368;243369;243370;243371;243372;243373;243374;243375;243376;243377;243378 243371 16 NCSIEEIK Unmodified 991.46445 0.46444592 4449 Q9H8G2 CAAP1 Caspase activity and apoptosis inhibitor 1 yes yes 0 0 0 By MS/MS 10 0 1 1 30.348 30.665 2 0.028761 32050 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 56.547 0 6735400 0 0 0 0 0 0 0 0 0 0 0 0 0 6735400 0 36911 4449 32924 307492 243379 243379 1 NCSSFLIK Unmodified 967.4797 0.47970205 1510 P46779 RPL28 60S ribosomal protein L28 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 49.759 49.823 2 0.039356 55221 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 50.703 31.226 62130000 0 0 0 0 10329000 0 6711700 0 8077600 7322900 0 0 16182000 13507000 0 36912 1510 32925 307493;307494;307495;307496;307497;307498 243380 243380 1 NCSSPEFSK Unmodified 1054.439 0.43895945 4064 Q99829 CPNE1 Copine-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 16.994 17.289 2 0.039051 16261 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.719 17.923 8096000 0 0 0 1082200 0 0 0 0 0 0 1618100 0 0 1614900 3780800 36913 4064 32926 307499;307500;307501;307502 243381 243381 1 NCTAGAVYTYHEK Unmodified 1512.6667 0.66672755 5133 Q9Y314 NOSIP Nitric oxide synthase-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 1 3 2 32.9 28.488 2;3 3.1636E-13 37483 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.96 113.81 217520000 20634000 173570000 23313000 0 0 0 0 0 0 0 0 0 0 0 0 36914 5133 32927 307503;307504;307505;307506;307507;307508 243382;243383;243384 243382 2 NCTCGLAEELEK Unmodified 1422.6119 0.61191479 2875 Q6FI81 CIAPIN1 Anamorsin yes yes 0 0 0 By MS/MS 2 0 1 1 59.859 54.001 2 3.1001E-14 69419 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 163.38 150 50853000 0 50853000 0 0 0 0 0 0 0 0 0 0 0 0 0 36915 2875 32928 307509 243385 243385 1 NCTIVSPDAGGAK Unmodified 1288.6082 0.60815004 1818 P60891 PRPS1 Ribose-phosphate pyrophosphokinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.833 31.032 2 2.1911E-08 33413 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 108.43 99.968 134770000 0 0 0 5857500 13679000 13206000 16451000 12241000 0 0 13316000 18500000 7736100 12101000 21682000 36916 1818 32929 307510;307511;307512;307513;307514;307515;307516;307517;307518;307519;307520;307521 243386;243387;243388;243389;243390;243391;243392;243393;243394;243395;243396;243397;243398;243399;243400 243392 15 NCTVFANDLNPESHK Unmodified 1744.7839 0.78388257 2664 Q32P41 TRMT5 tRNA (guanine(37)-N1)-methyltransferase yes yes 0 0 0 By MS/MS 2 0 1 1 61.691 55.816 3 0.0081542 71977 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 41.554 30.499 29692000 0 29692000 0 0 0 0 0 0 0 0 0 0 0 0 0 36917 2664 32930 307522 243401;243402 243402 2 NCVAIAADRR Unmodified 1144.5771 0.57712468 1588 P49720 PSMB3 Proteasome subunit beta type-3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 2 2 20.098 20.308 2;3 1.9809E-09 19705 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 142.04 120.58 147470000 0 0 0 16228000 3447100 3054600 1991100 2769200 2785000 5092700 22340000 0 5629100 17173000 66964000 36918 1588 32931 307523;307524;307525;307526;307527;307528;307529;307530;307531;307532;307533;307534;307535 243403;243404;243405;243406 243404 2 NCVGSSLPEASPPAPEPSSPNAAVPEAIPTPR Unmodified 3195.5506 0.55064175 1792 P57086 SCAND1 SCAN domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 80.278 80.311 3 4.3949E-16 92968 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 49.709 44.049 49387000 0 0 0 1543800 4897400 5765600 4258400 4029700 0 5764600 0 6368300 4911000 5544100 6304400 36919 1792 32932 307536;307537;307538;307539;307540;307541;307542;307543;307544;307545 243407;243408;243409;243410;243411;243412;243413;243414 243408 8 NDALEMVEETTWQGLK Unmodified 1862.872 0.87202888 1591 P49748 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 94.989 90.124 3 0.0021027 111771 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 54.237 49.769 13053000 0 13053000 0 0 0 0 0 0 0 0 0 0 0 0 0 36920 1591 32933 307546 243415 243415 1 NDALSMIIK Oxidation (M) 1019.5321 0.53213155 3701;164 O00507;Q93008 USP9Y;USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-Y;Probable ubiquitin carboxyl-terminal hydrolase FAF-X no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 8.22 3.33 2 7 2 1 1 1 1 1 1 1 64.277 63.629 2 0.0077361 82285 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.819 64.187 122320000 0 85241000 0 0 2456900 7393600 4476800 0 2633300 8914600 0 0 4409800 0 6795000 36921 164;3701 32934 307547;307548;307549;307550;307551;307552;307553;307554;307555 243416;243417;243418;243419;243420;243421 243418 229 6 NDAPTPGTSTTPGLR Unmodified 1483.7267 0.72668527 2104 Q04726 TLE3 Transducin-like enhancer protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.982 39.163 2 7.3784E-27 44095 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 130.44 114.81 507730000 0 0 0 29191000 27712000 31724000 35108000 37942000 35533000 47231000 46840000 53678000 53419000 44727000 64622000 36922 2104 32935 307556;307557;307558;307559;307560;307561;307562;307563;307564;307565;307566;307567 243422;243423;243424;243425;243426;243427;243428;243429;243430;243431 243429 8 NDARALEAARIK Unmodified 1326.7368 0.73679645 2803 Q5U5X0 LYRM7 Complex III assembly factor LYRM7 yes yes 0 0 2 By MS/MS 2 0 1 1 38.848 32.286 3 0.031436 44880 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.802 34.125 14382000 14382000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36923 2803 32936 307568 243432 243432 0 NDASEVVLAGER Unmodified 1258.6153 0.61534391 4002 Q96T88 UHRF1 E3 ubiquitin-protein ligase UHRF1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.198 45.368 2 2.6029E-07 50869 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 138.99 127.14 175350000 0 0 0 10168000 10194000 15007000 11585000 11527000 12016000 14034000 20098000 17215000 13819000 14223000 25468000 36924 4002 32937 307569;307570;307571;307572;307573;307574;307575;307576;307577;307578;307579;307580 243433;243434;243435;243436;243437;243438;243439;243440;243441;243442;243443;243444 243434 12 NDCEENGLAK Unmodified 1148.4768 0.47680152 360 O43719 HTATSF1 HIV Tat-specific factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11.926 11.533 2 0.00089969 10436 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 116.37 109.31 132370000 10954000 5605800 0 4680600 3774600 6151400 6292300 7337200 4515900 10504000 11268000 15634000 14450000 12420000 18783000 36925 360 32938 307581;307582;307583;307584;307585;307586;307587;307588;307589;307590;307591;307592;307593;307594 243445;243446;243447;243448;243449;243450;243451;243452;243453;243454;243455;243456 243456 12 NDDDEEEAARER Unmodified 1447.5811 0.58114325 2117 Q05682 CALD1 Caldesmon yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 9.6084 9.7464 3 0.0053574 8043 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 41.644 39.763 51664000 0 0 0 2588400 0 2371800 3814200 3348400 3063500 4715200 0 11003000 4971800 4672700 11115000 36926 2117 32939 307595;307596;307597;307598;307599;307600;307601;307602;307603;307604 243457;243458 243457 2 NDDIETDINK Unmodified 1175.5306 0.53061123 5063 Q9UPW5 AGTPBP1 Cytosolic carboxypeptidase 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 32.885 32.672 2 0.039039 36018 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 40.352 26.633 3845900 0 0 0 0 1180400 2665500 0 0 0 0 0 0 0 0 0 36927 5063 32940 307605;307606 243459 243459 1 NDDIRILRDIEQYYSTQIDEMPMNVADLI 2 Oxidation (M) 3514.6596 0.65959985 1400 P38919 EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes yes 0 2 2 By MS/MS 2 0 1 1 99.778 91.647 3 4.5187E-46 118113 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 109.26 99.883 33902000 33902000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36928 1400 32941 307607 243460;243461 243461 2183;2184 2 NDDIRILRDIEQYYSTQIDEMPMNVADLI Unmodified 3482.6698 0.6697706 1400 P38919 EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes yes 0 0 2 By MS/MS 2 0 1 1 102.61 94.481 3 1.6125E-55 121533 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 115.45 108.45 88893000 88893000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36929 1400 32941 307608 243462;243463 243463 2 NDDLNKPINK Unmodified 1169.6041 0.60405094 2647 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.15 2.35 1 2 23 3 2 2 2 2 2 1 2 2 2 2 2 2 14.914 14.645 2;3 4.1899E-10 18677 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 200.32 162.77 418920000 0 140720000 0 18169000 15174000 10892000 22100000 17405000 7100600 29491000 31811000 34396000 25107000 22599000 43951000 36930 2647 32942 307609;307610;307611;307612;307613;307614;307615;307616;307617;307618;307619;307620;307621;307622;307623;307624;307625;307626;307627;307628;307629;307630;307631;307632;307633;307634 243464;243465;243466;243467;243468;243469;243470 243465 7 NDEEQMETHER Oxidation (M) 1432.5525 0.55248565 5074 Q9UQR1 ZNF148 Zinc finger protein 148 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 5.6942 5.7656 3 0.0038068 3791 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 46.592 39.553 28181000 0 0 0 8102500 0 3439800 7373400 2748800 2256100 0 0 0 4260900 0 0 36931 5074 32943 307635;307636;307637;307638;307639;307640;307641;307642 243471;243472;243473;243474 243473 6454 4 NDEEQMETHER Unmodified 1416.5576 0.55757103 5074 Q9UQR1 ZNF148 Zinc finger protein 148 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 10.397 10.533 3 0.0020851 8668 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.452 46.939 77877000 0 0 0 6434700 3923800 5908200 7284200 2696600 3951400 4542000 6521700 9354300 5587600 9296300 12376000 36932 5074 32943 307643;307644;307645;307646;307647;307648;307649;307650;307651;307652;307653;307654 243475;243476;243477;243478 243476 3 NDEILSLK Unmodified 930.50221 0.50221163 478 O75330 HMMR Hyaluronan mediated motility receptor yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 55.392 55.214 2 0.021803 62593 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 61.679 33.47 13864000 0 0 0 0 6345300 0 0 7518800 0 0 0 0 0 0 0 36933 478 32944 307655;307656 243479;243480 243479 2 NDEITHDK Unmodified 970.43559 0.43558863 3246 Q8IWV7 UBR1 E3 ubiquitin-protein ligase UBR1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 5.7079 2.4071 2 0.0046994 4392 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.61 108.33 156030000 0 156030000 0 0 0 0 0 0 0 0 0 0 0 0 0 36934 3246 32945 307657;307658 243481;243482 243481 2 NDFEIVLPENAEK Unmodified 1516.7409 0.74093835 4010 Q99459 CDC5L Cell division cycle 5-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.91 3.42 2 1 8 2 1 1 1 1 1 1 1 1 1 79.489 78.554 2 4.9196E-13 96758 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.86 110.1 585140000 0 280570000 1930400 25611000 32172000 0 0 28052000 0 0 44233000 59358000 36761000 32474000 43981000 36935 4010 32946 307659;307660;307661;307662;307663;307664;307665;307666;307667;307668;307669 243483;243484;243485;243486;243487;243488 243484 6 NDFGNFFGSAVTK Unmodified 1402.6517 0.65172941 3243 Q8IWR0 ZC3H7A Zinc finger CCCH domain-containing protein 7A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.567 80.628 2 2.5432E-07 92786 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 97.214 86.05 76962000 0 0 0 2277800 2345800 6941700 4024800 5452100 4757800 8485700 8002600 6130200 5084100 6561500 16898000 36936 3243 32947 307670;307671;307672;307673;307674;307675;307676;307677;307678;307679;307680;307681 243489;243490;243491;243492;243493;243494;243495;243496;243497;243498;243499;243500;243501 243494 13 NDFRLQPSSTSESMDQLLNK Unmodified 2309.0958 0.095774239 4047 Q99700 ATXN2 Ataxin-2 yes yes 0 0 1 By MS/MS 2 0 1 1 80.047 77.474 3 0.029721 94082 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 25.888 23.218 4251800 0 0 4251800 0 0 0 0 0 0 0 0 0 0 0 0 36937 4047 32948 307682 243502 243502 1 NDFTEEEEAQVR Unmodified 1465.6321 0.63211618 1946 P63208 SKP1 S-phase kinase-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 42.597 42.72 2 3.3623E-08 46822 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 148.32 142.29 92814000 0 0 0 3730600 5108200 7017500 6138000 4630700 2804700 9915600 19327000 0 7467400 8312900 18362000 36938 1946 32949 307683;307684;307685;307686;307687;307688;307689;307690;307691;307692;307693 243503;243504;243505;243506;243507;243508;243509;243510;243511;243512 243506 10 NDFTEEEEAQVRK Unmodified 1593.7271 0.7270792 1946 P63208 SKP1 S-phase kinase-associated protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.74 3.52 7 3 24 3 5 2 2 2 2 2 2 2 2 2 2 2 2 2 37.245 36.007 2;3 6.7801E-89 39873 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 247.22 236.47 4299100000 257960000 1277800000 79757000 131260000 98364000 152650000 164550000 135580000 116120000 189460000 256330000 359210000 236120000 317680000 526200000 36939 1946 32950 307694;307695;307696;307697;307698;307699;307700;307701;307702;307703;307704;307705;307706;307707;307708;307709;307710;307711;307712;307713;307714;307715;307716;307717;307718;307719;307720;307721;307722;307723;307724;307725;307726;307727 243513;243514;243515;243516;243517;243518;243519;243520;243521;243522;243523;243524;243525;243526;243527;243528;243529;243530;243531;243532;243533;243534;243535;243536;243537;243538;243539;243540;243541;243542;243543;243544;243545;243546;243547 243517 29 NDGAVAGTRYFQCQPK Unmodified 1810.8421 0.84206616 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 50.619 44.66 3 0.00033084 61397 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.562 66.707 48770000 40353000 0 8416900 0 0 0 0 0 0 0 0 0 0 0 0 36940 1286 32951 307728;307729 243548 243548 1 NDGLDIQLK Unmodified 1014.5346 0.53457439 4630 Q9NSV4 DIAPH3 Protein diaphanous homolog 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 61.126 60.39 2 0.003237 68726 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 90.709 52.471 387600000 0 109800000 0 11124000 17398000 25954000 18727000 0 18720000 31987000 30826000 36451000 25146000 26355000 35108000 36941 4630 32952 307730;307731;307732;307733;307734;307735;307736;307737;307738;307739;307740;307741;307742 243549;243550;243551;243552;243553;243554;243555;243556;243557;243558;243559;243560;243561;243562 243550 14 NDGSVAGVR Unmodified 873.43044 0.43044367 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 11.726 11.866 2 0.0051431 10184 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 82.279 30.706 41094000 0 0 0 2852500 2562300 3177000 3491200 0 3469700 5551700 3645600 6018800 4791700 0 5533800 36942 1286 32953 307743;307744;307745;307746;307747;307748;307749;307750;307751;307752 243563;243564;243565;243566 243565 4 NDGSVAGVRYFQCEPLK Unmodified 1938.9258 0.92579578 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 73.771 68.064 3 0.010802 84152 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 38.376 28.718 14733000 9424400 0 5308200 0 0 0 0 0 0 0 0 0 0 0 0 36943 1286 32954 307753;307754 243567;243568;243569 243568 3 NDHQEDFWK Unmodified 1217.5102 0.51015055 4394 Q9H4A4 RNPEP Aminopeptidase B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 43.479 38.21 3 0.024007 48102 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 51.193 44.888 133680000 33839000 77258000 22586000 0 0 0 0 0 0 0 0 0 0 0 0 36944 4394 32955 307755;307756;307757 243570 243570 1 NDIAINELMK Oxidation (M) 1175.5856 0.58562368 1668 P51665 PSMD7 26S proteasome non-ATPase regulatory subunit 7 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 53.669 52.908 2 0.0012069 59074 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 96.143 78.323 702330000 0 193670000 4727500 16413000 23368000 0 12854000 0 30375000 0 169570000 162240000 28502000 15090000 45517000 36945 1668 32956 307758;307759;307760;307761;307762;307763;307764;307765;307766;307767;307768;307769;307770 243571;243572;243573;243574;243575;243576;243577;243578;243579;243580;243581;243582;243583 243581 2681 12 NDIAINELMK Unmodified 1159.5907 0.59070906 1668 P51665 PSMD7 26S proteasome non-ATPase regulatory subunit 7 yes yes 0 0 0 By MS/MS 2 0 1 1 77.311 72.536 2 0.0063988 90433 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.143 75.273 1664600000 0 1664600000 0 0 0 0 0 0 0 0 0 0 0 0 0 36946 1668 32956 307771 243584 243584 1 NDIASHPPVEGSYAPR Unmodified 1708.8169 0.81689726 3039 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 43.956 44.36 3 1.3599E-07 49737 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 85.619 76.911 122560000 0 0 0 0 0 23234000 0 11171000 0 0 16251000 25545000 0 22528000 23829000 36947 3039 32957 307772;307773;307774;307775;307776;307777 243585;243586;243587;243588 243585 1 NDIEEQETLLGTIMPEEESAK Oxidation (M) 2391.0999 0.099916143 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 1 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 9.42 1.93 1 11 1 1 1 1 2 2 1 1 1 1 81.115 80.851 2 1.0873E-19 93587 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 81.311 76.509 45531000 0 6933100 0 1072800 0 4403000 0 4323600 0 6112400 5523400 6793100 2524400 2809600 5035400 36948 3676 32958 307778;307779;307780;307781;307782;307783;307784;307785;307786;307787;307788;307789 243589;243590;243591;243592;243593;243594 243592 5218 4 NDIEEQETLLGTIMPEEESAK Unmodified 2375.105 0.10500152 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 5.71 3.73 2 2 3 4 1 1 1 89.407 87.138 2;3 3.5228E-165 107677 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 276.64 258.28 267870000 0 256970000 0 0 0 0 0 0 0 3161400 0 0 0 1517200 6221200 36949 3676 32958 307790;307791;307792;307793;307794;307795;307796 243595;243596;243597;243598;243599 243596 5 NDIHEDNLLECPPEELAR Unmodified 2162.9902 0.99024653 2411 Q14527 HLTF Helicase-like transcription factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 73.626 73.747 3 1.032E-26 85114 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 91.475 88.034 286850000 0 0 0 0 20078000 23799000 12413000 33900000 18100000 30173000 33361000 35596000 24751000 22751000 31932000 36950 2411 32959 307797;307798;307799;307800;307801;307802;307803;307804;307805;307806;307807 243600;243601;243602;243603;243604;243605;243606;243607;243608;243609;243610;243611 243606 8 NDIHEDNLLECPPEELARDSEK Unmodified 2622.1868 0.18677409 2411 Q14527 HLTF Helicase-like transcription factor yes yes 0 0 1 By MS/MS 10 0 1 1 69.84 70.306 4 0.025685 80466 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 25.604 17.8 14372000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14372000 36951 2411 32960 307808 243612 243612 0 NDIHLDADDPNSADK Unmodified 1638.7122 0.71215742 4030 Q99590 SCAF11 Protein SCAF11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 33.339 33.526 3 2.1883E-05 36482 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 77.051 67.263 104850000 0 0 0 7609500 8865100 7967800 6227400 0 7282600 9746800 11770000 13065000 11595000 9291000 11433000 36952 4030 32961 307809;307810;307811;307812;307813;307814;307815;307816;307817;307818;307819 243613;243614;243615;243616;243617;243618;243619;243620;243621;243622;243623 243618 11 NDIHTLLK Unmodified 952.53418 0.53418046 319 O43324 EEF1E1 Eukaryotic translation elongation factor 1 epsilon-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.87 3.54 4 11 1 1 2 1 1 1 1 1 1 1 1 1 1 1 41.12 39.737 2 0.0039941 50987 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 148.52 68.06 1335300000 528210000 235400000 330520000 13580000 15748000 28883000 18596000 17364000 19253000 0 40230000 36058000 26785000 24708000 0 36953 319 32962 307820;307821;307822;307823;307824;307825;307826;307827;307828;307829;307830;307831;307832;307833;307834 243624;243625;243626;243627;243628;243629;243630;243631;243632;243633;243634;243635;243636 243631 11 NDILEEPVDSDSTK Unmodified 1560.7155 0.71551146 4407 Q9H582 ZNF644 Zinc finger protein 644 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 51.745 51.458 2 0.00030612 58189 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 89.548 64.693 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36954 4407 32963 307835;307836 243637;243638 243637 2 NDIVNMLVGNK Unmodified 1215.6282 0.6281572 4536 Q9NP72 RAB18 Ras-related protein Rab-18 yes yes 0 0 0 By MS/MS 10 0 1 1 80.669 80.823 2 0.020233 93647 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 49.444 28.574 5360100 0 0 0 0 0 0 0 0 0 0 0 5360100 0 0 0 36955 4536 32964 307837 243639 243639 1 NDLAVVDVR Unmodified 999.53491 0.53490874 1085 P19338 NCL Nucleolin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 13 1 2 1 1 1 1 1 1 1 1 1 1 52.99 53.081 2 0.0022199 59184 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 128.36 46.813 1436000000 0 0 0 60196000 55875000 92123000 75598000 66008000 97299000 116840000 161580000 156880000 179510000 134680000 239370000 36956 1085 32965 307838;307839;307840;307841;307842;307843;307844;307845;307846;307847;307848;307849;307850 243640;243641;243642;243643;243644;243645;243646;243647;243648;243649;243650 243646 8 NDLDDPER Unmodified 972.41485 0.41485319 2528 Q15393 SF3B3 Splicing factor 3B subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.154 16.331 2 0.033332 16314 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 53.775 36.389 53847000 0 0 0 1376100 2132400 2173200 2970300 2310600 1800400 3903300 6009400 6741700 5320400 9335300 9774000 36957 2528 32966 307851;307852;307853;307854;307855;307856;307857;307858;307859;307860;307861;307862 243651;243652;243653 243651 3 NDLITYLQK Unmodified 1106.5972 0.59717465 5004 Q9ULT8 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 72.74 72.209 2 0.0082186 82401 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.256 49.557 232260000 0 168400000 2220700 3902300 2691600 6770800 4136000 7142100 3747600 6581600 5507700 6768900 0 4634200 9755600 36958 5004 32967 307863;307864;307865;307866;307867;307868;307869;307870;307871;307872;307873;307874;307875 243654;243655;243656;243657 243655 4 NDLNPMFLDQVAK Oxidation (M) 1519.7341 0.73407884 5085 Q9Y263 PLAA Phospholipase A-2-activating protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78.18 77.312 2 1.3469E-08 89619 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 108.7 89.1 488800000 11081000 310020000 0 7257400 5858800 22307000 9345500 6969400 7054600 21674000 17554000 15914000 11872000 12578000 29310000 36959 5085 32968 307876;307877;307878;307879;307880;307881;307882;307883;307884;307885;307886;307887;307888;307889 243658;243659;243660;243661;243662;243663;243664;243665;243666;243667;243668;243669;243670 243658 6474 12 NDLNPMFLDQVAK Unmodified 1503.7392 0.73916421 5085 Q9Y263 PLAA Phospholipase A-2-activating protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 83.021 82.249 2 1.059E-12 94944 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 130.23 114.27 918890000 0 866720000 1869300 0 0 6411900 0 2127100 1392600 5426600 5306700 3002800 2167800 5685500 18783000 36960 5085 32968 307890;307891;307892;307893;307894;307895;307896;307897;307898;307899;307900;307901;307902 243671;243672;243673;243674;243675;243676;243677;243678;243679;243680;243681;243682 243675 12 NDLQDTEISPR Unmodified 1286.6103 0.61025853 4622 Q9NS91 RAD18 E3 ubiquitin-protein ligase RAD18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.405 39.584 2 1.9741E-05 43992 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 144.77 105.15 103860000 0 0 0 5329400 9091200 9006700 6825900 6866700 6586800 11696000 10561000 11705000 6434300 5923900 13828000 36961 4622 32969 307903;307904;307905;307906;307907;307908;307909;307910;307911;307912;307913;307914 243683;243684;243685;243686;243687;243688;243689;243690;243691;243692;243693;243694;243695;243696 243690 14 NDLSICGTLHSVDQYLNIK Unmodified 2189.0787 0.078667612 5137 Q9Y333 LSM2 U6 snRNA-associated Sm-like protein LSm2 yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 95.909 91.631 3 3.8283E-05 114506 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.49 53.72 96866000 0 96866000 0 0 0 0 0 0 0 0 0 0 0 0 0 36962 5137 32970 307915;307916;307917 243697;243698;243699 243698 3 NDLSPTTVMSEGAR Unmodified 1476.6879 0.68785692 1262 P30043 BLVRB Flavin reductase (NADPH) yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 58.762 58.863 2 9.0019E-05 66113 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 105.03 91.339 75203000 0 0 0 3918600 1971700 0 5190100 5504900 0 0 9001800 9676700 0 7414100 32525000 36963 1262 32971 307918;307919;307920;307921;307922;307923;307924;307925 243700;243701;243702;243703;243704;243705;243706 243701 7 NDLSPTTVMSEGAR Oxidation (M) 1492.6828 0.68277155 1262 P30043 BLVRB Flavin reductase (NADPH) yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 38.281 38.603 2 4.4383E-08 41699 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.767 58.808 23964000 0 0 0 0 1570000 0 0 0 1945800 0 5215200 5311900 0 0 9921400 36964 1262 32971 307926;307927;307928;307929;307930 243707;243708;243709;243710;243711 243708 1861 5 NDLSQLQLLIK Unmodified 1283.7449 0.74490152 3196 Q86XK3 SFR1 Swi5-dependent recombination DNA repair protein 1 homolog yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 91.718 87.656 2 5.1889E-05 109165 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.74 74.118 22276000 0 22276000 0 0 0 0 0 0 0 0 0 0 0 0 0 36965 3196 32972 307931;307932 243712 243712 1 NDLTREEIVELMRDVSK Unmodified 2046.0416 0.041553824 1458 P42574 CASP3 Caspase-3;Caspase-3 subunit p17;Caspase-3 subunit p12 yes yes 0 0 2 By MS/MS 2 0 1 1 93.766 85.636 3 1.1811E-25 110816 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 124.68 100.62 14928000 14928000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36966 1458 32973 307933 243713 243713 1 NDLYYNTITNFSEK Unmodified 1720.7944 0.79443049 2411 Q14527 HLTF Helicase-like transcription factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.819 76.879 2 2.9901E-20 88729 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 142.89 127.27 559280000 0 0 0 15387000 32049000 43103000 33901000 42974000 35644000 68376000 56139000 77900000 35993000 40773000 77039000 36967 2411 32974 307934;307935;307936;307937;307938;307939;307940;307941;307942;307943;307944;307945 243714;243715;243716;243717;243718;243719;243720;243721;243722;243723;243724;243725 243719 12 NDMAVPTPPPPPVPPTK Oxidation (M) 1769.9022 0.9022068 3971 Q96RN5 MED15 Mediator of RNA polymerase II transcription subunit 15 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 2 1 1 1 1 1 1 1 1 1 1 65.683 65.706 2 0.00018472 75473 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 63.76 54.328 42148000 0 0 0 2361100 3848000 4310200 6297700 0 4056800 4832900 4918400 0 5912200 0 5610800 36968 3971 32975 307946;307947;307948;307949;307950;307951;307952;307953;307954;307955;307956;307957 243726;243727;243728;243729;243730;243731;243732;243733;243734;243735;243736;243737;243738;243739 243727 5454 13 NDMAVPTPPPPPVPPTK Unmodified 1753.9073 0.90729217 3971 Q96RN5 MED15 Mediator of RNA polymerase II transcription subunit 15 yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 74.093 74.189 2 0.0033737 84608 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 51.726 47.709 26513000 0 0 0 0 2312200 1332000 0 3224200 2261800 0 5464500 0 3157000 2788400 5973100 36969 3971 32975 307958;307959;307960;307961;307962;307963;307964;307965 243740;243741;243742;243743 243743 4 NDMDEPPSGDFGGDEEK Oxidation (M) 1853.6898 0.689767 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.67 2.98 1 5 1 1 1 1 1 1 37.07 37.352 2 0.00018472 41411 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 63.76 63.76 21054000 0 0 0 0 0 3471500 0 2406900 0 6208900 0 0 4559900 0 4407100 36970 2451 32976 307966;307967;307968;307969;307970;307971 243744;243745;243746;243747 243747 4025 4 NDMDEPPSGDFGGDEEK Unmodified 1837.6949 0.69485237 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 45.915 46.141 2 6.2963E-07 50783 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 102.66 102.66 45757000 0 0 0 0 3104300 5233000 2532800 3691100 3075100 5334100 5878700 5302300 0 3609400 7996300 36971 2451 32976 307972;307973;307974;307975;307976;307977;307978;307979;307980;307981;307982 243748;243749;243750;243751;243752;243753;243754;243755 243751 8 NDMTYNYANR Unmodified 1260.5193 0.51933503 183 O14497 ARID1A AT-rich interactive domain-containing protein 1A yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 32.688 32.842 2 0.01862 34903 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 48.283 48.283 4722900 0 0 0 0 0 1741400 0 0 0 0 0 0 0 2981600 0 36972 183 32977 307983;307984 243756 243756 1 NDNDTFTVK Unmodified 1052.4775 0.47745344 1124 P21333 FLNA Filamin-A no no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 28.363 28.611 2 0.0032668 30374 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 93.143 75.108 196630000 0 0 0 7115400 0 14455000 9158900 3091100 4146800 13771000 22512000 32700000 16457000 14806000 58418000 36973 1124 32978 307985;307986;307987;307988;307989;307990;307991;307992;307993;307994;307995 243757;243758;243759;243760;243761;243762;243763;243764;243765 243761 8 NDNGASGQTSESIK Unmodified 1406.6274 0.62736516 4697 Q9NWH9 SLTM SAFB-like transcription modulator yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 11.616 11.709 2 0.0020317 10318 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 69.815 52.977 32847000 0 0 0 2564200 2558500 3482000 2711400 2425500 3173300 2747500 0 6369500 3189700 3625000 0 36974 4697 32979 307996;307997;307998;307999;308000;308001;308002;308003;308004;308005 243766;243767;243768;243769;243770 243769 5 NDNQILSEIVEAK Unmodified 1471.7518 0.75183739 405 O60502 MGEA5 Protein O-GlcNAcase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 81.904 81.047 2 3.7562E-09 93430 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 133.07 123.71 446070000 0 379590000 4765200 2002000 2020400 5234000 0 0 0 5810900 9148300 7108800 4331300 6701700 19353000 36975 405 32980 308006;308007;308008;308009;308010;308011;308012;308013;308014;308015;308016;308017;308018;308019 243771;243772;243773;243774;243775;243776;243777;243778;243779;243780;243781;243782 243774 11 NDNRQQFNSGRDQER Unmodified 1862.8368 0.83679786 621 O95104 SCAF4 Splicing factor, arginine/serine-rich 15 yes yes 0 0 2 By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 7.7924 7.9325 3 0.027216 4949 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 47.201 36.257 52292000 0 0 0 0 3431500 3174200 3165200 4544900 4187800 6647600 13906000 0 0 7745000 5490600 36976 621 32981 308020;308021;308022;308023;308024;308025;308026;308027;308028 243783 243783 1 NDNSSRFGK Unmodified 1023.4734 0.47337112 1356;1357;1366;121;367;3090;4580;5006;5204 P35579;O94832;Q8N1T3;P12883;P13535;P13533;P11055;Q9UKX2;Q6PIF6;Q13402;Q7Z406;P35580;P35749;O43795;O00159;Q9NQX4;Q9ULV0;Q9Y4I1 MYH9;MYO1D;MYO1H;MYH7;MYH8;MYH6;MYH3;MYH2;MYO7B;MYO7A;MYH14;MYH10;MYH11;MYO1B;MYO1C;MYO5C;MYO5B;MYO5A Myosin-9;Unconventional myosin-Id;Unconventional myosin-Ih;Myosin-7;Myosin-8;Myosin-6;Myosin-3;Myosin-2;Unconventional myosin-VIIb;Unconventional myosin-VIIa;Myosin-14;Myosin-10;Myosin-11;Unconventional myosin-Ib;Unconventional myosin-Ic;Unconventional myosin-Vc;Unconventional myosin-Vb;Unconventional myosin-Va no no 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 7.0017 4.0098 2 8.151E-06 5939 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 163.69 128.79 1326800000 1042500000 65210000 219070000 0 0 0 0 0 0 0 0 0 0 0 0 36977 1356;3090;1357;1366;367;121;4580;5006;5204 32982 308029;308030;308031 243784;243785 243784 2 NDNTEAFYK Unmodified 1100.4775 0.47745344 2254 Q13217 DNAJC3 DnaJ homolog subfamily C member 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 30.012 30.261 2 0.006731 31604 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.301 64.785 89361000 0 0 0 0 5360100 5039700 8760400 4236400 0 10179000 9708600 8120600 13004000 7528300 17424000 36978 2254 32983 308032;308033;308034;308035;308036;308037;308038;308039;308040;308041;308042 243786;243787;243788;243789;243790;243791;243792;243793;243794;243795;243796;243797 243789 12 NDPEILAMTNLVSAYQNNDITEFEK Oxidation (M) 2884.3437 0.34366866 1838 P61201 COPS2 COP9 signalosome complex subunit 2 yes yes 0 1 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 91.559 88.026 3 3.5099E-06 108934 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.056 59.173 57529000 0 55512000 2016900 0 0 0 0 0 0 0 0 0 0 0 0 36979 1838 32984 308043;308044;308045 243798;243799 243798 2982 2 NDPEILAMTNLVSAYQNNDITEFEK Unmodified 2868.3488 0.34875404 1838 P61201 COPS2 COP9 signalosome complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 2 4 1 98.534 93.362 2;3 8.4222E-146 116320 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 185.34 176.47 368740000 57599000 302180000 8964100 0 0 0 0 0 0 0 0 0 0 0 0 36980 1838 32984 308046;308047;308048;308049;308050;308051;308052 243800;243801;243802;243803;243804;243805;243806;243807 243802 8 NDPEITINVPQSSK Unmodified 1540.7733 0.77330111 2283 Q13416 ORC2 Origin recognition complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.329 61.429 2 3.3697E-14 69737 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 116.54 101.57 194890000 0 0 0 10042000 12851000 14406000 11950000 16649000 10027000 20922000 18899000 26179000 15128000 14278000 23561000 36981 2283 32985 308053;308054;308055;308056;308057;308058;308059;308060;308061;308062;308063;308064 243808;243809;243810;243811;243812;243813;243814;243815;243816;243817;243818;243819;243820 243810 12 NDPFTSDPFTK Unmodified 1267.5721 0.57208211 4836 Q9UBC2 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 73.719 69.707 2 0.0042584 87562 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.896 67.776 109250000 0 107660000 1587600 0 0 0 0 0 0 0 0 0 0 0 0 36982 4836 32986 308065;308066 243821 243821 1 NDPFVVDCSDK Unmodified 1294.55 0.54996646 183 O14497 ARID1A AT-rich interactive domain-containing protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 48.568 48.333 2 0.0024322 54455 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 67.726 57.202 6927400 0 0 0 0 3016900 0 3910500 0 0 0 0 0 0 0 0 36983 183 32987 308067;308068;308069;308070 243822;243823;243824;243825 243823 4 NDPHLCDFIETHYLNEQVK Unmodified 2371.0903 0.09029493 766 P02794 FTH1 Ferritin heavy chain;Ferritin heavy chain, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.43 0.495 4 3 2 4 1 85.609 81.275 3;4 3.93E-10 99737 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.762 76.161 263440000 37790000 222150000 3497800 0 0 0 0 0 0 0 0 0 0 0 0 36984 766 32988 308071;308072;308073;308074;308075;308076;308077 243826;243827;243828;243829;243830;243831 243826 5 NDPLPISTVGTR Unmodified 1268.6725 0.67246486 4672 Q9NVM9 ASUN Protein asunder homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.622 62.717 2 0.0022534 70730 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.624 35.226 123180000 0 0 0 7436800 7624500 10150000 9071600 10773000 6520000 12661000 11770000 13710000 8932500 8980100 15550000 36985 4672 32989 308078;308079;308080;308081;308082;308083;308084;308085;308086;308087;308088;308089 243832;243833;243834;243835;243836;243837;243838;243839;243840;243841;243842;243843;243844 243835 13 NDPLPISTVGTRGK Unmodified 1453.7889 0.7888916 4672 Q9NVM9 ASUN Protein asunder homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 58.333 52.35 3 0.007208 70765 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.004 42.934 79422000 33737000 21690000 23996000 0 0 0 0 0 0 0 0 0 0 0 0 36986 4672 32990 308090;308091;308092 243845;243846;243847 243845 3 NDPQLSLISAMIK Oxidation (M) 1444.7596 0.7595653 3659 Q92783 STAM Signal transducing adapter molecule 1 yes yes 0 1 0 By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 79.431 78.872 2 0.0012239 90450 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 61.344 46.677 65810000 0 24337000 1505800 0 1728600 0 3764300 4007600 3385200 0 4790400 9134100 2617300 4368400 6171000 36987 3659 32991 308093;308094;308095;308096;308097;308098;308099;308100;308101;308102;308103;308104 243848;243849;243850 243850 5181 3 NDPQLSLISAMIK Unmodified 1428.7647 0.76465068 3659 Q92783 STAM Signal transducing adapter molecule 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 6 4 2 2 1 1 1 1 93.089 91.343 2 2.632E-21 113803 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 167.6 147.83 193040000 0 180790000 1955400 0 0 0 0 0 1419800 0 0 0 0 0 8876400 36988 3659 32991 308105;308106;308107;308108 243851;243852 243851 1 NDPSLPEPK Unmodified 995.49238 0.49237523 366 O43776 NARS Asparagine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS 5.5 4.5 1 1 1 1 107.34 112.6 2 0.0073452 93463 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 94.85 80.181 56101000 56101000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36989 366 32992 308109;308110 243853;243854 243853 2 NDQANYSLNTDDPLIFK Unmodified 1966.9272 0.92723557 736 P00813 ADA Adenosine deaminase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 82.751 82.076 2 1.8959E-57 101145 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 199.96 169.09 357250000 0 318020000 0 0 0 0 2521100 2636400 1964800 2743900 8289200 7000400 3510700 0 10563000 36990 736 32993 308111;308112;308113;308114;308115;308116;308117;308118;308119;308120 243855;243856;243857;243858 243855 4 NDQCYDDIR Unmodified 1197.4721 0.47205049 5008 Q9ULV4 CORO1C Coronin-1C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 26.968 27.175 2 0.016648 29336 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 63.216 58.86 65332000 0 0 0 5302600 6127500 4839200 3698300 0 0 5066500 12027000 6853300 4305300 6605600 10507000 36991 5008 32994 308121;308122;308123;308124;308125;308126;308127;308128;308129;308130 243859;243860;243861;243862 243859 4 NDQCYEDIR Unmodified 1211.4877 0.48770055 4104 Q9BR76 CORO1B Coronin-1B yes yes 0 0 0 By MS/MS 10 0 1 1 28.85 29.545 2 0.031491 30970 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.732 42.366 9367800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9367800 36992 4104 32995 308131 243863 243863 1 NDQDNNSSMIDISYK Oxidation (M) 1758.7367 0.73665761 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 1 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.46 46.626 2 7.2861E-27 52426 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 126.1 109.85 60440000 0 0 0 2348600 3703500 5852700 3274800 0 5073200 5894400 5146200 11215000 6939900 4923800 6067900 36993 3023 32996 308132;308133;308134;308135;308136;308137;308138;308139;308140;308141;308142;308143 243864;243865;243866;243867;243868;243869;243870;243871;243872;243873 243871 4634 10 NDQDNNSSMIDISYK Unmodified 1742.7417 0.74174299 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 59.942 60.103 2 1.0236E-18 67990 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 106.49 82.505 28615000 0 0 0 0 2141100 0 0 4210400 2326400 3542600 5149900 0 0 3612300 7632400 36994 3023 32996 308144;308145;308146;308147;308148;308149;308150;308151;308152;308153 243874;243875;243876;243877;243878;243879;243880 243875 7 NDQDTWDYTNPNLSGQGDPGSNPNK Unmodified 2733.1539 0.15389406 1008 P14866 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 63.192 63.358 3 5.5871E-62 72887 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 86.791 86.642 170410000 0 0 0 0 8543800 13968000 11145000 17421000 9631100 13316000 20112000 12764000 12013000 18602000 32891000 36995 1008 32997 308154;308155;308156;308157;308158;308159;308160;308161;308162;308163;308164;308165;308166 243881;243882;243883;243884;243885;243886;243887;243888;243889;243890;243891;243892;243893;243894;243895;243896;243897 243893 17 NDQTPSEVLIIPLLPMALVAPDEMEK Unmodified 2862.4759 0.47586881 2885 Q6IBW4 NCAPH2 Condensin-2 complex subunit H2 yes yes 0 0 0 By MS/MS 2 0 1 1 104.5 99.758 3 0.00011605 123214 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 27.389 20.955 3501200 0 3501200 0 0 0 0 0 0 0 0 0 0 0 0 0 36996 2885 32998 308167 243898 243898 1 NDRDVLGISDTLIR Unmodified 1585.8424 0.84238373 1325 P32929 CTH Cystathionine gamma-lyase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 79.103 78.024 3 0.0006584 89231 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.899 36.613 77900000 0 16762000 2710400 0 0 0 0 0 0 0 6042000 10778000 0 7225800 34381000 36997 1325 32999 308168;308169;308170;308171;308172;308173 243899;243900;243901;243902 243900 4 NDRDVLGISDTLIRLSVGLEDEEDLLEDLDQALK Unmodified 3810.9375 0.93747249 1325 P32929 CTH Cystathionine gamma-lyase yes yes 0 0 2 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 105.07 99.563 4 4.111E-222 124830 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 188.36 179.05 75138000 71515000 3622400 0 0 0 0 0 0 0 0 0 0 0 0 0 36998 1325 33000 308174;308175;308176 243903;243904;243905 243905 3 NDRGDQVPNRK Unmodified 1297.6487 0.64870972 3255 Q8IX12 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 5.6685 5.796 3 0.01761 3756 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 64.73 56 126570000 0 0 0 16736000 0 13932000 20622000 0 17739000 11051000 0 0 12808000 13163000 20522000 36999 3255 33001 308177;308178;308179;308180;308181;308182;308183;308184 243906;243907 243907 0 NDRGNDLDTK Unmodified 1146.5265 0.5265289 1638 P50851 LRBA Lipopolysaccharide-responsive and beige-like anchor protein yes yes 0 0 1 By MS/MS 3 0 1 1 6.8544 3.496 3 0.03517 5036 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 67.726 38.999 17250000 0 17250000 0 0 0 0 0 0 0 0 0 0 0 0 0 37000 1638 33002 308185 243908 243908 0 NDRLAVNK Unmodified 928.50903 0.50902834 5267 Q9Y678 COPG1 Coatomer subunit gamma-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 13.066 9.8636 2 0.019323 15274 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 133.6 57.565 741090000 525840000 102870000 112390000 0 0 0 0 0 0 0 0 0 0 0 0 37001 5267 33003 308186;308187;308188 243909 243909 0 NDRYIVNGSHEANK Unmodified 1615.7703 0.77028142 1751 P55010 EIF5 Eukaryotic translation initiation factor 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15.451 14.788 3 2.7648E-13 22857 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 127.32 107.31 301380000 220650000 15120000 13725000 3446500 2541600 2906600 3246700 4266400 3801900 4798100 9586100 6587200 5261900 5438700 0 37002 1751 33004 308189;308190;308191;308192;308193;308194;308195;308196;308197;308198;308199;308200;308201;308202 243910;243911;243912;243913;243914;243915;243916 243912 5 NDSDLFGLGLEEAGPK Unmodified 1660.7944 0.79443049 2677 Q3YEC7 RABL6 Rab-like protein 6 yes yes 0 0 0 By MS/MS 2 0 1 1 88.61 83.768 2 0.005987 104131 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.879 59.111 34381000 0 34381000 0 0 0 0 0 0 0 0 0 0 0 0 0 37003 2677 33005 308203 243917 243917 1 NDSDPTYGQQGHPNTWK Unmodified 1943.8398 0.83981755 3706 Q93052 LPP Lipoma-preferred partner yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 31.677 31.811 3 0.0072113 33752 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 34.202 30.482 29006000 0 0 0 0 3180000 4827600 1836100 2229500 0 0 0 0 0 6786300 10146000 37004 3706 33006 308204;308205;308206;308207;308208;308209 243918;243919 243918 1 NDSEQFAALLLVTK Unmodified 1547.8195 0.81952302 4833 Q9UBB6 NCDN Neurochondrin yes yes 0 0 0 By MS/MS 2 0 1 1 96.318 88.188 2 0.0032666 113923 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.597 68.698 12898000 12898000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37005 4833 33007 308210 243920 243920 1 NDSFFTPDSNHNSLSQSTTGHLSLPQK Unmodified 2958.3744 0.37439194 2810 Q5VT52 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9 2.65 1 7 1 1 1 1 1 1 2 73.801 72.957 3;4 6.1464E-60 83897 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.594 91.597 207620000 11335000 0 0 0 0 13863000 0 0 12760000 38628000 0 41280000 9725900 0 80025000 37006 2810 33008 308211;308212;308213;308214;308215;308216;308217;308218 243921;243922;243923;243924;243925;243926;243927;243928 243925 8 NDSHVLIELHK Unmodified 1303.6884 0.68844927 2555 Q15642 TRIP10 Cdc42-interacting protein 4 yes yes 0 0 0 By MS/MS 2 0 1 1 52.837 44.822 3 0.041183 61507 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 35.677 17.343 23512000 23512000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37007 2555 33009 308219 243929 243929 1 NDSLAGVVIADNEYPSR Unmodified 1818.8748 0.87480607 288 O15498 YKT6 Synaptobrevin homolog YKT6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.197 75.256 2 2.8744E-183 86326 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 222.1 205.85 176940000 0 0 0 7861600 7318500 14934000 10810000 10044000 8371100 20952000 20618000 22433000 13005000 10357000 30233000 37008 288 33010 308220;308221;308222;308223;308224;308225;308226;308227;308228;308229;308230;308231 243930;243931;243932;243933;243934;243935;243936;243937;243938;243939;243940;243941 243933 12 NDSPTQIPVSSDVCR Unmodified 1673.7679 0.76789816 3485 Q8TC07 TBC1D15 TBC1 domain family member 15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.236 52.383 2 5.1452E-29 59250 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 144.28 132.22 268870000 0 0 0 15109000 13435000 24156000 22918000 18652000 11692000 28030000 33398000 20176000 28994000 22501000 29806000 37009 3485 33011 308232;308233;308234;308235;308236;308237;308238;308239;308240;308241;308242;308243 243942;243943;243944;243945;243946;243947;243948;243949;243950;243951;243952;243953;243954;243955 243943 14 NDSVIVADQTPTPTR Unmodified 1612.8057 0.80566387 1019 P15336 ATF2 Cyclic AMP-dependent transcription factor ATF-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.137 48.225 2 7.1462E-28 54382 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 125.28 107.85 58971000 0 0 0 4964000 3176600 5860500 3696000 3576500 3000400 7372700 8454000 0 0 6259300 12611000 37010 1019 33012 308244;308245;308246;308247;308248;308249;308250;308251;308252;308253;308254;308255 243956;243957;243958;243959;243960;243961;243962;243963;243964;243965;243966;243967;243968 243964 13 NDSVVAGGGAIEMELSK Oxidation (M) 1691.8036 0.80361496 4065 Q99832 CCT7 T-complex protein 1 subunit eta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.95 3.75 10 6 24 5 9 2 2 2 2 2 2 2 2 2 2 2 2 2 70.285 69.17 2;3 2.2296E-96 87280 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 206.49 184.46 2497200000 29699000 1772100000 16847000 37627000 35959000 61067000 49951000 42600000 37125000 68684000 68966000 92439000 61194000 59424000 63509000 37011 4065 33013 308256;308257;308258;308259;308260;308261;308262;308263;308264;308265;308266;308267;308268;308269;308270;308271;308272;308273;308274;308275;308276;308277;308278;308279;308280;308281;308282;308283;308284;308285;308286;308287;308288;308289;308290;308291;308292;308293;308294;308295 243969;243970;243971;243972;243973;243974;243975;243976;243977;243978;243979;243980;243981;243982;243983;243984;243985;243986;243987;243988;243989;243990;243991;243992;243993;243994;243995;243996;243997;243998;243999;244000;244001;244002;244003;244004;244005;244006 243978 5570 37 NDSVVAGGGAIEMELSK Unmodified 1675.8087 0.80870034 4065 Q99832 CCT7 T-complex protein 1 subunit eta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3.72 3.16 17 3 5 3 14 3 1 1 1 1 1 79.85 76.349 2;3 2.1379E-57 93077 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 156.24 137.62 2419100000 160440000 2115400000 65748000 0 0 0 0 0 10644000 15379000 0 14378000 0 9263000 27863000 37012 4065 33013 308296;308297;308298;308299;308300;308301;308302;308303;308304;308305;308306;308307;308308;308309;308310;308311;308312;308313;308314;308315;308316;308317;308318;308319;308320 244007;244008;244009;244010;244011;244012;244013;244014;244015;244016;244017;244018;244019;244020;244021;244022;244023;244024;244025;244026;244027;244028;244029;244030;244031;244032;244033;244034;244035;244036;244037;244038;244039;244040;244041 244009 34 NDTVTPAELSELR Unmodified 1443.7205 0.72053726 1455 P42356 PI4KA Phosphatidylinositol 4-kinase alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 71.191 71.347 2 0.0011909 82000 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.439 47.413 18533000 0 0 0 0 0 2920700 2143800 3351200 0 0 0 3425700 2371900 4320200 0 37013 1455 33014 308321;308322;308323;308324;308325;308326;308327 244042;244043;244044;244045;244046;244047;244048 244047 7 NDVGYRELPETDADLK Unmodified 1833.8745 0.87447172 4708 Q9NWY4 C4orf27 UPF0609 protein C4orf27 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 60.959 55.272 3 0.00035831 71510 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.877 71.822 106110000 10984000 92089000 3038700 0 0 0 0 0 0 0 0 0 0 0 0 37014 4708 33015 308328;308329;308330;308331 244049;244050;244051;244052;244053;244054 244050 6 NDVLAHQATVETVNK Unmodified 1637.8373 0.83729835 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 39.078 38.377 3 8.4546E-05 49457 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.208 58.98 192770000 0 112410000 0 8511400 5974000 5908000 6510100 7974700 5625000 10740000 9998400 11922000 0 0 7191100 37015 5049 33016 308332;308333;308334;308335;308336;308337;308338;308339;308340;308341;308342;308343 244055;244056;244057;244058;244059;244060;244061;244062;244063;244064;244065;244066 244059 12 NDVLPLSNSVPEDVGK Unmodified 1681.8523 0.85227972 3819 Q96EQ0 SGTB Small glutamine-rich tetratricopeptide repeat-containing protein beta yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 75.759 75.173 2 0.00087853 92576 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.669 84.129 127170000 0 89285000 0 1826400 1944300 3148900 2865900 2041700 0 2761500 4078000 3821100 2930100 2800200 9668800 37016 3819 33017 308344;308345;308346;308347;308348;308349;308350;308351;308352;308353;308354;308355;308356 244067;244068;244069;244070;244071;244072 244068 6 NDVMIRK Unmodified 874.46947 0.46947171 3734;1846 Q96A72;P61326 MAGOHB;MAGOH Protein mago nashi homolog 2;Protein mago nashi homolog no no 0 0 1 By MS/MS 3 0 1 1 16.472 12.88 2 0.04031 16181 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 123.99 81.27 18619000 0 18619000 0 0 0 0 0 0 0 0 0 0 0 0 0 37017 3734;1846 33018 308357 244073 244073 0 NDVMNLLESAGFSR Oxidation (M) 1567.7301 0.73005609 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 83.987 84.106 2 0.0021472 97363 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 48.659 32.769 16145000 0 0 0 0 0 0 0 3477900 0 6129700 0 0 2913200 3624100 0 37018 5071 33019 308358;308359;308360;308361 244074;244075;244076 244074 6447 1 NDVNVEFSEK Unmodified 1179.5408 0.54078198 5131 Q9Y2Z0 SUGT1 Suppressor of G2 allele of SKP1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 41.169 40.805 2 7.9376E-05 52405 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 140.78 97.696 453500000 37688000 0 0 13764000 14639000 34864000 24942000 26959000 21070000 44087000 43053000 50283000 29985000 33426000 78743000 37019 5131 33020 308362;308363;308364;308365;308366;308367;308368;308369;308370;308371;308372;308373;308374 244077;244078;244079;244080;244081;244082;244083;244084;244085;244086;244087;244088;244089;244090;244091;244092 244083 16 NDVNWSQPGEK Unmodified 1272.5735 0.57347909 2300 Q13492 PICALM Phosphatidylinositol-binding clathrin assembly protein yes yes 0 0 0 By MS/MS 2 0 1 1 36.724 31.809 2 4.0542E-09 41677 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 132.25 113.27 38841000 0 38841000 0 0 0 0 0 0 0 0 0 0 0 0 0 37020 2300 33021 308375 244093 244093 1 NDVVGTTYLHLSK Unmodified 1445.7514 0.75144346 4773 Q9NZM1 MYOF Myoferlin yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 69.926 63.936 3 0.0044277 85160 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 44.457 40.624 9321200 6405700 0 2915500 0 0 0 0 0 0 0 0 0 0 0 0 37021 4773 33022 308376;308377 244094 244094 1 NDWRDAEENKK Unmodified 1403.643 0.64295564 2117 Q05682 CALD1 Caldesmon yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 13.112 13.327 3 0.018463 12324 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 53.569 42.356 57696000 0 0 0 0 3048500 0 4824100 3501100 0 0 10896000 9072200 5619400 7200100 13534000 37022 2117 33023 308378;308379;308380;308381;308382;308383;308384;308385 244095;244096 244096 1 NDYDQLQK Unmodified 1022.4669 0.46688876 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 21.974 21.749 2 0.0048728 21589 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 109.01 75.462 915970000 0 18762000 0 229750000 53243000 68700000 65172000 176580000 51717000 0 78700000 0 91623000 40635000 41083000 37023 1029 33024 308386;308387;308388;308389;308390;308391;308392;308393;308394;308395;308396;308397 244097;244098;244099;244100;244101;244102;244103;244104;244105;244106;244107;244108;244109 244104 11 NDYEARPQYYK Unmodified 1445.6575 0.65754307 417 O60610 DIAPH1 Protein diaphanous homolog 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 28.79 29.063 3 0.0064003 31359 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 50.452 44.073 98604000 0 0 0 0 5717600 10612000 0 5718500 0 12961000 12218000 12771000 15968000 10264000 12374000 37024 417 33025 308398;308399;308400;308401;308402;308403;308404;308405;308406 244110;244111;244112;244113;244114;244115;244116 244111 7 NDYEMTFNNETSVMPCEDDHHLPTVQFDFTGIDDLENK Oxidation (M) 4532.8995 0.89952514 1221 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed yes yes 0 1 0 By MS/MS 2 0 1 1 95.236 87.105 4 1.634E-30 112636 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.885 68.621 20865000 20865000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37025 1221 33026 308407 244117 244117 1793 1 NDYLPLYSSSTK Unmodified 1386.6667 0.66671078 5074 Q9UQR1 ZNF148 Zinc finger protein 148 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 3 9 1 1 1 1 1 1 1 1 1 1 1 1 66.794 65.329 2 0.00038013 75257 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 81.017 65.866 343670000 4105600 190640000 1686500 12980000 13360000 17278000 12852000 12467000 13505000 0 0 0 22102000 15591000 27105000 37026 5074 33027 308408;308409;308410;308411;308412;308413;308414;308415;308416;308417;308418;308419 244118;244119;244120;244121;244122;244123;244124;244125;244126;244127;244128 244126 10 NEAFSSEDSLGENK Unmodified 1525.6532 0.65324556 2713 Q56NI9 ESCO2 N-acetyltransferase ESCO2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 38.977 39.065 2 1.2841E-12 43333 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 128.85 121.2 97366000 0 0 0 4600000 3726700 5821000 4738200 3919900 5064500 16730000 21929000 30836000 0 0 0 37027 2713 33028 308420;308421;308422;308423;308424;308425;308426;308427;308428 244129;244130;244131;244132;244133;244134;244135;244136;244137 244130 9 NEAGIVSCTAR Unmodified 1176.5557 0.55572054 3134;3581 Q8WX93;Q86TC9 PALLD;MYPN Palladin;Myopalladin no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.559 27.756 2 0.00035813 30271 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 117.02 76.754 202570000 0 0 0 11475000 11784000 14515000 13649000 13049000 13223000 15604000 17868000 20449000 21189000 21128000 28635000 37028 3581;3134 33029 308429;308430;308431;308432;308433;308434;308435;308436;308437;308438;308439;308440 244138;244139;244140;244141;244142;244143;244144;244145;244146 244146 5 NEAITSFEGK Unmodified 1094.5244 0.52440364 3998 Q96T51 RUFY1 RUN and FYVE domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 42.303 41.471 2 4.8674E-06 52092 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145.72 105.46 419290000 0 312370000 0 7526000 0 0 9186400 14254000 8195700 14318000 0 19112000 13878000 0 20455000 37029 3998 33030 308441;308442;308443;308444;308445;308446;308447;308448;308449;308450 244147;244148;244149;244150;244151;244152;244153;244154;244155;244156 244149 8 NEALAALLR Unmodified 969.56073 0.56072956 986 P13797 PLS3 Plastin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.054 76.116 2 0.0034358 87755 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 106.04 71.234 108060000 0 0 0 5005700 3607100 7374700 6900100 6158100 2812600 8677100 11008000 10752000 4338400 8323000 33105000 37030 986 33031 308451;308452;308453;308454;308455;308456;308457;308458;308459;308460;308461;308462 244157;244158;244159;244160;244161;244162;244163;244164;244165;244166;244167;244168 244158 12 NEANGRETTEVDLLTK Unmodified 1788.8854 0.88537076 4879 Q9UG63 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.81 2.8 3 1 22 1 2 1 2 1 1 2 2 2 2 2 2 2 2 2 50.999 50.283 2;3 5.5172E-23 56009 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 151.99 118.11 942090000 20172000 49257000 10501000 30779000 27081000 48022000 55716000 54490000 134310000 60506000 106840000 99228000 86530000 59149000 99511000 37031 4879 33032 308463;308464;308465;308466;308467;308468;308469;308470;308471;308472;308473;308474;308475;308476;308477;308478;308479;308480;308481;308482;308483;308484;308485;308486;308487;308488 244169;244170;244171;244172;244173;244174;244175;244176;244177;244178;244179;244180;244181;244182;244183;244184;244185;244186;244187;244188 244186 20 NEAPEGNLGDFAEFQR Unmodified 1792.8016 0.80164113 4973 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.806 76.866 2 2.6763E-27 88896 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 142.91 127.37 200510000 0 0 0 9624500 12127000 19303000 12454000 9921700 9511100 21419000 17804000 20667000 17348000 20128000 30202000 37032 4973 33033 308489;308490;308491;308492;308493;308494;308495;308496;308497;308498;308499;308500 244189;244190;244191;244192;244193;244194;244195;244196;244197;244198;244199;244200;244201;244202;244203 244201 15 NEAPEGNLGDFAEFQRR Unmodified 1948.9028 0.90275216 4973 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.205 71.277 3 1.4768E-08 81419 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.463 64.848 92606000 0 0 0 4783000 3681200 8652500 5142200 5192700 4480600 7269900 6302300 12548000 6483300 8169100 19901000 37033 4973 33034 308501;308502;308503;308504;308505;308506;308507;308508;308509;308510;308511;308512 244204;244205;244206;244207;244208;244209;244210;244211;244212;244213;244214;244215;244216 244207 13 NEATVSTGK Unmodified 905.44543 0.44542503 5184 Q9Y450 HBS1L HBS1-like protein yes yes 0 0 0 By MS/MS 2 0 1 1 7.0036 3.5714 2 0.027376 6711 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.846 12.412 8399000 8399000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37034 5184 33035 308513 244217 244217 1 NEAWLSEVEGK Unmodified 1260.5986 0.59863121 2766 Q5T0N5 FNBP1L Formin-binding protein 1-like yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 70.329 69.639 2 0.001397 88205 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.4 93.61 163260000 0 138980000 0 1091000 1298700 1958500 1458900 1540200 0 0 2516400 3660700 2489300 1891400 6379400 37035 2766 33036 308514;308515;308516;308517;308518;308519;308520;308521;308522;308523;308524;308525 244218;244219;244220;244221;244222;244223;244224;244225;244226 244221 9 NECMQGLEVIESTNLK Unmodified 1863.8706 0.87064867 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 0 0 By MS/MS 2 0 1 1 84.191 79.47 2 7.7909E-16 98783 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.7 104.82 19910000 0 19910000 0 0 0 0 0 0 0 0 0 0 0 0 0 37036 5189 33037 308526 244227 244227 1 NEDEEEEEEEKDEAEDLLGRGSR Unmodified 2706.1376 0.13763487 5231 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 0 2 By MS/MS 2 0 2 2 71.82 63.582 3;4 0.000462 84394 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.645 50.591 37724000 37724000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37037 5231 33038 308527;308528 244228;244229;244230 244229 3 NEDIPNVAVYPHNGMIDLK Unmodified 2138.0466 0.046639202 1744 P54709 ATP1B3 Sodium/potassium-transporting ATPase subunit beta-3 yes yes 0 0 0 By MS/MS 2 0 1 1 85.131 80.387 3 0.0052792 99949 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 36.111 33.116 19111000 0 19111000 0 0 0 0 0 0 0 0 0 0 0 0 0 37038 1744 33039 308529 244231 244231 1 NEDITEPQSILAAAEK Unmodified 1727.8578 0.85775902 5112 Q9Y2Q3 GSTK1 Glutathione S-transferase kappa 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 78.939 78.977 2 5.9028E-08 91638 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 102.87 91.66 139440000 0 0 0 8823200 13052000 0 14507000 14223000 12619000 0 20021000 25120000 14302000 16774000 0 37039 5112 33040 308530;308531;308532;308533;308534;308535;308536;308537;308538;308539;308540 244232;244233;244234;244235;244236;244237;244238;244239;244240;244241;244242 244239 11 NEDLCLNDSNSRDENFK Unmodified 2068.8756 0.87561071 3086 Q7Z3T8 ZFYVE16 Zinc finger FYVE domain-containing protein 16 yes yes 0 0 1 By MS/MS 3 0 1 1 49.661 44.765 3 0.043008 55538 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 27.208 23.714 2538400 0 2538400 0 0 0 0 0 0 0 0 0 0 0 0 0 37040 3086 33041 308541 244243 244243 1 NEDLEEIASTDLK Unmodified 1475.6991 0.69913312 1971 P78318 IGBP1 Immunoglobulin-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 73.596 73.854 2 1.4199E-13 84547 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 122.33 105.65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37041 1971 33042 308542;308543 244244;244245 244244 2 NEDLLEVGSRPGPASQLPR Unmodified 2034.0494 0.049416394 3941 Q96P11 NSUN5 Probable 28S rRNA (cytosine-C(5))-methyltransferase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 70.706 70.909 3 3.6367E-07 80876 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 77.514 68.695 93551000 0 0 0 0 0 0 0 0 14952000 0 37688000 0 0 40911000 0 37042 3941 33043 308544;308545;308546;308547;308548;308549 244246;244247;244248;244249;244250;244251;244252 244250 7 NEDLTDELSLNK Unmodified 1389.6624 0.66235368 1331 P33981 TTK Dual specificity protein kinase TTK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 66.186 66.411 2 4.5426E-08 75252 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 141.95 100.51 257470000 0 0 0 0 0 23623000 17959000 0 21362000 30116000 36285000 35418000 28351000 26654000 37705000 37043 1331 33044 308550;308551;308552;308553;308554;308555;308556;308557;308558;308559 244253;244254;244255;244256;244257;244258;244259;244260;244261;244262;244263 244256 11 NEDLWDSMASICPTDGVK Oxidation (M) 2052.8769 0.87685626 4757 Q9NZ08 ERAP1 Endoplasmic reticulum aminopeptidase 1 yes yes 0 1 0 By MS/MS 2 0 1 1 89.695 84.822 2 7.085E-06 105385 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.202 80.557 25869000 0 25869000 0 0 0 0 0 0 0 0 0 0 0 0 0 37044 4757 33045 308560 244264 244264 6132 1 NEDLWDSMASICPTDGVK Unmodified 2036.8819 0.88194164 4757 Q9NZ08 ERAP1 Endoplasmic reticulum aminopeptidase 1 yes yes 0 0 0 By MS/MS 2 0 1 1 90.288 85.392 2 5.1623E-05 106072 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.022 49.796 24432000 0 24432000 0 0 0 0 0 0 0 0 0 0 0 0 0 37045 4757 33045 308561 244265 244265 1 NEDNGAPENSVEK Unmodified 1401.6008 0.60081606 3029 Q71RC2 LARP4 La-related protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.971 14.133 2 1.1108E-08 13437 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 110.39 98.54 46922000 0 0 0 1909300 2691100 3517700 2448200 1856900 2617500 4271200 5574100 5051300 4577100 3690300 8716700 37046 3029 33046 308562;308563;308564;308565;308566;308567;308568;308569;308570;308571;308572;308573 244266;244267;244268;244269;244270;244271;244272;244273;244274;244275;244276 244267 11 NEDSLVFVQTDK Unmodified 1393.6725 0.67252444 740 P01023 A2M Alpha-2-macroglobulin yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 63.22 62.962 2 0.0012686 71849 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 69.276 57.069 12131000 0 0 0 3445300 0 0 0 8686200 0 0 0 0 0 0 0 37047 740 33047 308574;308575 244277 244277 1 NEDTTFDK Unmodified 968.40871 0.40870518 393 O60306 AQR Intron-binding protein aquarius yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 13.93 14.115 2 0.037979 12808 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.193 37.521 19072000 0 0 0 0 1738600 1814400 0 1079300 1437800 2483000 2626800 0 2321200 1624000 3946600 37048 393 33048 308576;308577;308578;308579;308580;308581;308582;308583;308584 244278 244278 1 NEDVQLR Unmodified 872.43519 0.4351947 1271;1272 P30153;P30154 PPP2R1A;PPP2R1B Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform;Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform no no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 20.393 20.578 2 0.021589 20953 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 106.42 31.899 165440000 0 0 0 0 10988000 21842000 14444000 11032000 0 17387000 21217000 0 0 29180000 39353000 37049 1271;1272 33049 308585;308586;308587;308588;308589;308590;308591;308592 244279;244280;244281;244282 244282 4 NEEDAAELVALAQAVNAR Unmodified 1882.9385 0.93846896 1137 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 90.74 90.811 2;3 1.2215E-163 105722 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 260.19 228.19 281010000 0 0 0 2703000 5124600 14345000 7250900 9988800 6960600 33357000 38380000 32870000 7919000 19156000 102950000 37050 1137 33050 308593;308594;308595;308596;308597;308598;308599;308600;308601;308602;308603;308604;308605;308606;308607;308608;308609;308610;308611;308612;308613;308614;308615;308616 244283;244284;244285;244286;244287;244288;244289;244290;244291;244292;244293;244294;244295;244296;244297;244298;244299;244300;244301;244302;244303;244304;244305;244306;244307;244308 244305 23 NEEDAGK Unmodified 761.31916 0.31916189 4056 Q99729 HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B yes yes 0 0 0 By MS/MS 1 0 1 1 106.69 111.96 2 0.018208 92693 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 115.78 85.109 41415000 41415000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37051 4056 33051 308617 244309 244309 1 NEEDEGHSNSSPR Unmodified 1456.5815 0.5814776 2365 Q14103 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 5.6222 5.2513 3 1.7843E-21 3971 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 111.79 111.31 290900000 0 128060000 0 14230000 13025000 15304000 18372000 19372000 15101000 4008200 13268000 14258000 5438400 9932600 20529000 37052 2365 33052 308618;308619;308620;308621;308622;308623;308624;308625;308626;308627;308628;308629;308630;308631 244310;244311;244312;244313;244314;244315;244316;244317;244318;244319 244315 9 NEEDEGHSNSSPRHSEAATAQREEWK Unmodified 2980.2932 0.29318151 2365 Q14103 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 yes yes 0 0 2 By MS/MS 2 0 1 1 24.55 19.473 4 5.9004E-22 27675 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.856 84.512 20644000 20644000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37053 2365 33053 308632 244320;244321 244321 2 NEEEDQKEDEEDQNEEK Unmodified 2135.8251 0.8250745 2003 P82970 HMGN5 High mobility group nucleosome-binding domain-containing protein 5 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 7.3201 6.5256 3 0 4651 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 263.15 263.15 120520000 17713000 16638000 0 0 0 0 0 0 0 2675400 22934000 16719000 0 12374000 31469000 37054 2003 33054 308633;308634;308635;308636;308637;308638;308639 244322;244323;244324;244325;244326;244327;244328 244324 7 NEEEGNSEEIK Unmodified 1276.5419 0.54190419 550 O75844 ZMPSTE24 CAAX prenyl protease 1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 11.597 11.748 2 0.00035167 10395 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 119.75 99.96 27012000 0 0 0 0 2507700 1990700 2392000 3511400 2680200 0 2685200 5669000 2309400 3266700 0 37055 550 33055 308640;308641;308642;308643;308644;308645;308646;308647;308648 244329;244330;244331;244332;244333;244334;244335;244336;244337;244338 244337 10 NEEENEK Unmodified 890.36175 0.36175498 2828 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog yes yes 0 0 0 By MS/MS 1 0 1 1 106.09 111.36 2 0.028844 91987 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 95.541 4.0252 31731000 31731000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37056 2828 33056 308649 244339 244339 1 NEEENENSISQYK Unmodified 1582.6747 0.67470928 2000 P82673 MRPS35 28S ribosomal protein S35, mitochondrial yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 29.701 30.012 2 1.0645E-06 32205 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 93.058 82.228 7082300 0 0 0 0 0 0 0 0 0 2696300 4386000 0 0 0 0 37057 2000 33057 308650;308651;308652;308653 244340;244341;244342 244341 3 NEEENIYSVPHDSTQGK Unmodified 1945.8654 0.8653636 4615 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 39.96 40.315 3 0.0093708 44826 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 31.7 21.779 13410000 0 0 0 0 0 0 0 2923500 0 4879900 0 0 0 0 5606200 37058 4615 33058 308654;308655;308656 244343 244343 1 NEEIVMPEEQTGLVR Oxidation (M) 1758.8458 0.84581413 3615 Q92538 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching 10 0 15 1 2 2 2 1 1 1 1 2 1 1 60.965 61.009 2 0.00021796 71010 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 66.289 60.317 58343000 0 0 0 1685700 4830300 9110200 5778300 1743400 2312300 4362400 0 6611900 8850200 5575100 7483600 37059 3615 33059 308657;308658;308659;308660;308661;308662;308663;308664;308665;308666;308667;308668;308669;308670;308671 244344;244345;244346;244347;244348 244347 5115 5 NEEIVMPEEQTGLVR Unmodified 1742.8509 0.85089951 3615 Q92538 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 72.228 72.456 2 0.00066892 83406 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 72.937 56.799 36131000 0 0 0 0 0 0 4036600 0 0 0 0 8533100 6483900 7707000 9370000 37060 3615 33059 308672;308673;308674;308675;308676;308677;308678 244349;244350;244351;244352;244353;244354 244353 6 NEELEIQEK Unmodified 1130.5455 0.54553301 4492 Q9HAW4 CLSPN Claspin yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 33.914 34.216 2 0.0037225 37625 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 122.19 73.432 56899000 0 0 0 0 0 7472300 2131700 5527800 5781000 7204900 7193700 12006000 0 0 9581500 37061 4492 33060 308679;308680;308681;308682;308683;308684;308685;308686;308687 244355;244356;244357;244358;244359;244360 244358 4 NEELEQLYQDQEVPKPK Unmodified 2086.0219 0.021864239 4681 Q9NVS9 PNPO Pyridoxine-5'-phosphate oxidase yes yes 0 0 1 By MS/MS 3 0 1 1 71.678 67.152 3 0.037796 81868 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 28.549 24.829 4594300 0 4594300 0 0 0 0 0 0 0 0 0 0 0 0 0 37062 4681 33061 308688 244361 244361 1 NEELQAEMR Oxidation (M) 1134.4975 0.49753696 5335 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 2 1 2 1 2 1 2 2 1 1 2 20.121 20.367 2 0.0034719 21010 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 78.324 59.593 + 164260000 0 0 0 0 8198100 11221000 7392000 4223500 7906600 8748000 24816000 34440000 8957500 9655300 38699000 37063 5335 33062 308689;308690;308691;308692;308693;308694;308695;308696;308697;308698;308699;308700;308701;308702;308703;308704;308705 244362;244363;244364;244365;244366;244367;244368 244362 6729 6 NEELSVLLK Unmodified 1043.5863 0.58627561 3489 Q8TCG1 KIAA1524 Protein CIP2A yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 77.315 73.566 2 0.014849 91847 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 111.17 31.699 98291000 0 95260000 3030100 0 0 0 0 0 0 0 0 0 0 0 0 37064 3489 33063 308706;308707 244369 244369 0 NEENTEPGAESSENADDPNK Unmodified 2145.857 0.85704333 1473 P43243 MATR3 Matrin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.04 2.73 2 1 24 2 1 2 2 2 2 2 2 2 2 2 2 2 2 24.593 24.814 2;3 3.455E-239 99102 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 249.41 232.88 1636000000 22605000 15637000 0 107050000 88448000 152000000 118380000 99044000 119620000 140630000 112610000 156810000 148020000 124120000 230990000 37065 1473 33064 308708;308709;308710;308711;308712;308713;308714;308715;308716;308717;308718;308719;308720;308721;308722;308723;308724;308725;308726;308727;308728;308729;308730;308731;308732;308733;308734 244370;244371;244372;244373;244374;244375;244376;244377;244378;244379;244380;244381;244382;244383;244384;244385;244386;244387;244388;244389;244390;244391 244382 22 NEENTEPGAESSENADDPNKDTSENADGQSDENK Unmodified 3636.4328 0.43276685 1473 P43243 MATR3 Matrin-3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 22.907 23.048 3 3.4069E-13 24250 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 38.298 37.8 23852000 0 0 0 0 2950500 0 1900700 3255600 0 0 4773400 0 10972000 0 0 37066 1473 33065 308735;308736;308737;308738;308739 244392;244393;244394 244394 3 NEEPSEEEIDAPKPK Unmodified 1710.7948 0.79482442 4588 Q9NR30 DDX21 Nucleolar RNA helicase 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 34.867 33.938 3 8.2361E-31 36678 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 119.45 109.65 234100000 9072800 50008000 0 10221000 10202000 9997600 11705000 10645000 8894600 15854000 21275000 23810000 14688000 13717000 24011000 37067 4588 33066 308740;308741;308742;308743;308744;308745;308746;308747;308748;308749;308750;308751;308752;308753;308754 244395;244396;244397;244398;244399;244400;244401;244402;244403;244404;244405;244406;244407 244398 13 NEEPVRSPERR Unmodified 1367.6906 0.69057454 3687 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 8.1329 8.2599 3 0.01805 5802 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.374 54.862 141350000 0 0 0 7450400 5658500 4504000 5769900 5369800 7392600 9704500 35075000 23325000 12167000 9250800 15686000 37068 3687 33067 308755;308756;308757;308758;308759;308760;308761;308762;308763;308764;308765;308766 244408 244408 0 NEEQGIPLEYLEK Unmodified 1560.7672 0.7671531 1223 P27707 DCK Deoxycytidine kinase yes yes 0 0 0 By MS/MS 10 0 1 1 79.059 79.305 2 0.022766 91261 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.092 25.153 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37069 1223 33068 308767 244409 244409 1 NEESGAVVVPGTR Unmodified 1313.6575 0.65754307 5068 Q9UQ84 EXO1 Exonuclease 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 39.484 39.743 2 3.1504E-14 43018 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 126.19 90.749 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37070 5068 33069 308768;308769;308770;308771;308772;308773;308774;308775;308776;308777 244410;244411;244412;244413;244414;244415;244416;244417;244418;244419 244412 10 NEESQEIQK Unmodified 1103.5095 0.50948185 455 O75116 ROCK2 Rho-associated protein kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 9.4028 8.5567 2 0.0037093 6433 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 95.909 1.2177 24679000 6944000 0 0 0 0 4233600 0 0 0 3062500 10439000 0 0 0 0 37071 455 33070 308778;308779;308780;308781 244420;244421;244422;244423 244423 2 NEETAQVVRK Unmodified 1172.6149 0.61494998 672 O95613 PCNT Pericentrin yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 14.198 10.808 3 0.048 14588 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 42.718 28.038 12941000 0 12941000 0 0 0 0 0 0 0 0 0 0 0 0 0 37072 672 33071 308782;308783 244424 244424 0 NEETLREEEEEK Unmodified 1533.6795 0.67946031 1998 P82663 MRPS25 28S ribosomal protein S25, mitochondrial yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 16.572 16.82 3 0.030568 15576 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.685 16.746 22805000 0 0 0 1431900 0 0 0 1053500 0 2091800 0 5081900 4124000 3642000 5379700 37073 1998 33072 308784;308785;308786;308787;308788;308789;308790 244425;244426 244425 2 NEEYFMFPEPK Oxidation (M) 1445.6173 0.61731774 2430 Q14680 MELK Maternal embryonic leucine zipper kinase yes yes 0 1 0 By matching By matching By matching By MS/MS By matching 10 0 5 1 1 1 1 1 76.568 76.584 2 0.0054941 88809 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 51.762 42.804 15683000 0 0 0 1820100 0 0 0 3309900 3295400 0 0 0 3834300 3423800 0 37074 2430 33073 308791;308792;308793;308794;308795 244427 244427 3990 1 NEFIPTNFEILPLEK Unmodified 1802.9455 0.94545182 1006 P14735 IDE Insulin-degrading enzyme yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.25 2.59 5 2 1 2 4 1 1 97.633 93.647 2;3 1.3924E-15 116335 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 155.86 141.44 835680000 51325000 768010000 15234000 1104900 0 0 0 0 0 0 0 0 0 0 0 37075 1006 33074 308796;308797;308798;308799;308800;308801;308802;308803 244428;244429;244430;244431;244432;244433 244430 5 NEFITLAHVNPQSFPAPK Unmodified 2009.0371 0.037060793 1644 P51003;Q9NRJ5 PAPOLA;PAPOLB Poly(A) polymerase alpha;Poly(A) polymerase beta yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 6.57 3.96 3 4 1 1 1 1 1 1 1 83.908 81.781 3 2.9987E-08 104138 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.661 74.111 183120000 113580000 26195000 16666000 0 0 3543100 0 0 0 8434800 3539900 0 0 0 11161000 37076 1644 33075 308804;308805;308806;308807;308808;308809;308810 244434;244435;244436;244437;244438 244437 5 NEFNLESK Unmodified 979.46108 0.4610751 2593 Q15907;P62491 RAB11B;RAB11A Ras-related protein Rab-11B;Ras-related protein Rab-11A yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.461 36.643 2 0.0049163 39029 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 114.28 67.855 504860000 0 0 0 19646000 29338000 37389000 29304000 38792000 20536000 44052000 58898000 60499000 49717000 53587000 63103000 37077 2593 33076 308811;308812;308813;308814;308815;308816;308817;308818;308819;308820;308821;308822 244439;244440;244441;244442;244443;244444;244445;244446;244447;244448;244449;244450 244442 12 NEGCPSFVK Unmodified 1036.4648 0.46478027 3839 Q96FV9 THOC1 THO complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 1 1 6 2 1 1 1 1 1 1 32.603 31.639 2 0.0060063 33589 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.221 58.373 218040000 0 126120000 0 0 0 0 8465900 9405200 8483700 0 0 0 21459000 15444000 28658000 37078 3839 33077 308823;308824;308825;308826;308827;308828;308829;308830 244451;244452;244453;244454 244454 4 NEGEMITSK Unmodified 1007.4594 0.45936054 3295 Q8IZH2 XRN1 5'-3' exoribonuclease 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 18.662 18.866 2 0.024857 17904 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.473 30.996 36225000 0 0 0 2504400 2545600 2023400 2297600 0 3142200 0 4611500 4491200 3210400 4238700 7159700 37079 3295 33078 308831;308832;308833;308834;308835;308836;308837;308838;308839;308840 244455;244456 244456 2 NEGGTWSVEK Unmodified 1105.504 0.50400254 2256 Q13228 SELENBP1 Selenium-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 2 1 6 1 2 1 1 1 1 1 1 31.933 30.391 2 1.1731E-05 38782 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.25 105.1 688950000 13450000 621780000 0 724800 0 2268100 0 0 0 0 7963500 6846500 0 7624400 28293000 37080 2256 33079 308841;308842;308843;308844;308845;308846;308847;308848;308849 244457;244458;244459;244460;244461;244462 244458 5 NEGNEELVK Unmodified 1030.4931 0.49310351 5355 yes yes 0 0 0 By MS/MS 1 0 1 1 101.6 102.5 2 0.083353 93582 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 60.436 15.989 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37081 5355 33080 308850 244463 244463 1 NEGNIFPNPEATFVK Unmodified 1675.8206 0.82058566 5231 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.349 81.409 2 2.4087E-28 93784 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 166.7 143.24 313270000 0 0 0 9658200 15384000 29711000 20844000 23678000 15247000 33618000 29693000 31667000 19821000 28233000 55717000 37082 5231 33081 308851;308852;308853;308854;308855;308856;308857;308858;308859;308860;308861;308862 244464;244465;244466;244467;244468;244469;244470;244471;244472;244473;244474;244475;244476 244467 13 NEGPLNVVK Unmodified 968.5291 0.52909508 4900 Q9UHF7 TRPS1 Zinc finger transcription factor Trps1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 43.678 43.003 2 0.017448 49041 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 55.676 27.502 105780000 0 53988000 0 8654200 4630900 0 6913700 6848500 0 0 9670400 0 7416900 7655200 0 37083 4900 33082 308863;308864;308865;308866;308867;308868;308869;308870 244477;244478;244479;244480 244479 3 NEGSCGPARIEYA Unmodified 1422.6198 0.61977736 4583 Q9NQZ5 STARD7 StAR-related lipid transfer protein 7, mitochondrial yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 45.16 40.082 2 4.8225E-05 51888 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.39 92.211 31546000 0 31546000 0 0 0 0 0 0 0 0 0 0 0 0 0 37084 4583 33083 308871;308872 244481 244481 1 NEGSESAPEGQAQQR Unmodified 1586.6921 0.69209068 1955 P67809 YBX1 Nuclease-sensitive element-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 10.154 10.29 2;3 0 9072 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 280.56 249.14 6114100000 0 0 0 281290000 429630000 353980000 311660000 214230000 245840000 432130000 715570000 1031000000 762850000 578850000 757150000 37085 1955 33084 308873;308874;308875;308876;308877;308878;308879;308880;308881;308882;308883;308884;308885;308886;308887;308888;308889;308890;308891;308892;308893;308894;308895;308896 244482;244483;244484;244485;244486;244487;244488;244489;244490;244491;244492;244493;244494;244495;244496;244497;244498;244499;244500;244501 244484 16 NEGTATYAAAVLFR Unmodified 1482.7467 0.74669243 1010 P14923 JUP Junction plakoglobin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 81.642 81.732 2 3.4787E-22 94351 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 183.03 143.73 315640000 0 0 0 32743000 0 18557000 12750000 87977000 19723000 28009000 25512000 34258000 20823000 14113000 21171000 37086 1010 33085 308897;308898;308899;308900;308901;308902;308903;308904;308905;308906;308907 244502;244503;244504;244505;244506;244507;244508;244509;244510;244511;244512 244508 11 NEHFAIPAVCDSVQPPLDQLPHK Unmodified 2611.2853 0.28530634 4807 Q9P260 KIAA1468 LisH domain and HEAT repeat-containing protein KIAA1468 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 85.783 82.157 4 0.011467 99072 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 26.627 19.434 25179000 0 22918000 2260900 0 0 0 0 0 0 0 0 0 0 0 0 37087 4807 33086 308908;308909 244513 244513 1 NEHRPASALVNPLAR Unmodified 1643.8856 0.88558595 242 O15027 SEC16A Protein transport protein Sec16A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 2 2 1 2 48.472 48.919 3;4 0.0092123 53951 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.366 32.898 282890000 0 0 0 0 0 33139000 0 0 23390000 0 18308000 71349000 53975000 14787000 67944000 37088 242 33087 308910;308911;308912;308913;308914;308915;308916;308917;308918;308919 244514;244515;244516;244517 244514 4 NEIAELTR Unmodified 944.49271 0.49270958 96 CON__Q5XKE5;Q5XKE5 KRT79 Keratin, type II cytoskeletal 79 no no 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 42.146 41.642 2 0.0047784 46905 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 113.71 52.947 + 58674000 0 0 0 55938000 2735600 0 0 0 0 0 0 0 0 0 0 37089 96 33088 308920;308921 244518 244518 1 NEIASVAYR Unmodified 1021.5193 0.51925868 278 O15371 EIF3D Eukaryotic translation initiation factor 3 subunit D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.26 39.44 2 0.0031269 42573 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 91.064 62.642 278750000 0 0 0 15255000 12326000 20293000 16034000 16383000 15428000 26232000 31926000 32413000 24275000 26720000 41461000 37090 278 33089 308922;308923;308924;308925;308926;308927;308928;308929;308930;308931;308932;308933 244519;244520;244521;244522;244523;244524;244525;244526;244527;244528;244529;244530;244531 244527 12 NEIDNYEEDYQK Unmodified 1558.6423 0.64234652 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.91 3.42 2 1 8 1 2 1 1 1 1 1 2 1 45.435 42.993 2 2.0502E-27 54123 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 185.61 181.31 178510000 5809000 111780000 0 0 3354200 10028000 0 0 0 0 0 26057000 0 0 21484000 37091 2047 33090 308934;308935;308936;308937;308938;308939;308940;308941;308942;308943;308944 244532;244533;244534;244535;244536;244537;244538;244539;244540;244541 244534 10 NEIIILANTTNTELK Unmodified 1685.92 0.91996535 2190 Q12792 TWF1 Twinfilin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS 5.78 3.79 3 2 4 2 2 1 1 1 1 1 81.957 79.546 2;3 3.9125E-72 99346 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 196.15 174.15 130450000 16888000 89793000 11603000 0 0 0 0 0 0 2220100 0 1736700 0 2228800 5980600 37092 2190 33091 308945;308946;308947;308948;308949;308950;308951;308952;308953 244542;244543;244544;244545;244546;244547;244548 244542 6 NEILRQTIEEK Unmodified 1371.7358 0.73579339 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 1 By MS/MS 2 0 1 1 44.738 40.923 2 0.033699 51630 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 76.228 9.6065 4116100 0 0 4116100 0 0 0 0 0 0 0 0 0 0 0 0 37093 2556 33092 308954 244549 244549 1 NEIMVAPDK Unmodified 1015.5008 0.50083142 4542 Q9NP97 DYNLRB1 Dynein light chain roadblock-type 1 yes yes 0 0 0 By MS/MS 2 0 1 1 40.408 35.356 2 0.01963 46022 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.221 64.5 49878000 0 49878000 0 0 0 0 0 0 0 0 0 0 0 0 0 37094 4542 33093 308955 244550 244550 1 NEINGNWISASSINEAR Unmodified 1873.8919 0.89185312 2696 Q53EL6 PDCD4 Programmed cell death protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 74.603 73.936 2 1.9132E-52 85393 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 162.32 144.51 108950000 0 31213000 0 3729000 3200200 9422900 5682300 6445800 5090200 11407000 12500000 12832000 7431000 0 0 37095 2696 33094 308956;308957;308958;308959;308960;308961;308962;308963;308964;308965;308966;308967 244551;244552;244553;244554;244555;244556;244557;244558;244559;244560;244561;244562 244560 12 NEINGNWISASSINEARINAK Unmodified 2300.1509 0.15092135 2696 Q53EL6 PDCD4 Programmed cell death protein 4 yes yes 0 0 1 By MS/MS 2 0 1 1 80.883 72.753 3 7.609E-59 95397 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 135.36 130.83 92804000 92804000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37096 2696 33095 308968 244563 244563 1 NEINSLQSSEGLLEK Unmodified 1659.8315 0.83154427 4664 Q9NVC6 MED17 Mediator of RNA polymerase II transcription subunit 17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 70.391 70.082 2;3 7.7E-27 79837 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 155.02 126.81 135880000 0 41738000 0 2975200 4096100 7872800 6512500 7163000 5657900 9400000 10319000 11909000 8121600 8336800 11783000 37097 4664 33096 308969;308970;308971;308972;308973;308974;308975;308976;308977;308978;308979;308980;308981 244564;244565;244566;244567;244568;244569;244570;244571;244572;244573;244574;244575;244576 244568 13 NEIPNSHILDQYR Unmodified 1597.7849 0.78486885 910 P0DN79;P35520 CBS Cystathionine beta-synthase yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.5 1.94 1 15 1 1 1 2 1 1 1 1 1 1 1 2 2 61.868 61.757 2;3 0.00064654 69832 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.611 61.183 222390000 0 0 5353900 5077200 4529500 23381000 9006200 11795000 6225400 22114000 26908000 17977000 10970000 24765000 54291000 37098 910 33097 308982;308983;308984;308985;308986;308987;308988;308989;308990;308991;308992;308993;308994;308995;308996;308997 244577;244578;244579;244580;244581;244582;244583 244580 4 NEIREWEAK Unmodified 1173.5778 0.57783619 428 O60749 SNX2 Sorting nexin-2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 36.196 31.275 2 0.0075622 39642 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 131.06 90.793 22011000 5488000 0 16523000 0 0 0 0 0 0 0 0 0 0 0 0 37099 428 33098 308998;308999 244584 244584 1 NEISEMNR Unmodified 991.43929 0.4392938 69;88 CON__P08729;CON__Q3KNV1;P08729 KRT7 Keratin, type II cytoskeletal 7 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 20.881 21.146 2 0.0058549 21799 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 105.25 24.13 + 127960000 0 0 0 0 13612000 0 0 17497000 9960200 0 21319000 0 23470000 19195000 22904000 37100 69;88 33099 309000;309001;309002;309003;309004;309005;309006;309007;309008;309009;309010 244585;244586;244587;244588;244589;244590;244591;244592;244593;244594;244595 244592 10 NEISEMNR Oxidation (M) 1007.4342 0.43420842 69;88 CON__P08729;CON__Q3KNV1;P08729 KRT7 Keratin, type II cytoskeletal 7 no no 0 1 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 8.0901 8.2209 2 0.008605 5983 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 73.208 57.566 + 66430000 0 0 0 4535300 4367900 3100600 4475500 3649700 4313500 6466600 10611000 9534600 6346500 3973800 5054500 37101 69;88 33099 309011;309012;309013;309014;309015;309016;309017;309018;309019;309020;309021;309022 244596;244597;244598;244599 244597 84 4 NEITRLTTVK Unmodified 1173.6717 0.67173657 3170 Q86VP6 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 3 2 2 49.52 43.488 2;3 9.8842E-05 54569 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 141.29 98.21 1860100000 1694100000 90932000 75115000 0 0 0 0 0 0 0 0 0 0 0 0 37102 3170 33100 309023;309024;309025;309026;309027;309028;309029 244600;244601;244602;244603;244604;244605 244605 4 NEIVANVGK Unmodified 942.51345 0.51344502 2661 Q32MZ4 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 30.196 29.178 2 0.0033037 31291 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 93.374 40.658 602030000 12582000 398100000 1717800 9572500 7999100 9471500 9932700 11837000 8115700 17170000 21052000 29566000 17310000 2937100 44670000 37103 2661 33101 309030;309031;309032;309033;309034;309035;309036;309037;309038;309039;309040;309041;309042;309043;309044;309045 244606;244607;244608;244609;244610;244611;244612;244613;244614;244615;244616;244617;244618;244619;244620;244621;244622;244623;244624;244625 244617 17 NELEAFK Unmodified 849.42323 0.42323303 3048 Q7L3B6 CDC37L1 Hsp90 co-chaperone Cdc37-like 1 yes yes 0 0 0 By MS/MS 2 0 1 1 43.869 38.649 2 0.032133 50222 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.794 33.24 107210000 0 107210000 0 0 0 0 0 0 0 0 0 0 0 0 0 37104 3048 33102 309046 244626 244626 1 NELEIPGQYDGR Unmodified 1389.6525 0.6524577 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.861 59.969 2 0.001229 69007 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 80.763 63.327 186580000 0 0 0 8976700 9536400 14598000 15068000 9288600 6775200 15456000 16776000 29861000 19470000 17139000 23634000 37105 1986 33103 309047;309048;309049;309050;309051;309052;309053;309054;309055;309056;309057;309058 244627;244628;244629;244630;244631;244632 244631 6 NELERDSK Unmodified 989.47779 0.47778779 5022 Q9UMY4 SNX12 Sorting nexin-12 yes yes 0 0 1 By MS/MS By MS/MS 2.67 0.471 1 2 1 2 6.6197 3.1965 2 0.02307 5366 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 148.99 68.758 286280000 402490 285880000 0 0 0 0 0 0 0 0 0 0 0 0 0 37106 5022 33104 309059;309060;309061 244633;244634 244633 1 NELERNITIK Unmodified 1228.6776 0.67755023 1427 P41091;Q2VIR3 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein yes no 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 46.239 41.493 2 5.5701E-11 55004 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.52 6.3561 754250000 0 416960000 337300000 0 0 0 0 0 0 0 0 0 0 0 0 37107 1427 33105 309062;309063;309064 244635;244636;244637 244635 3 NELESYAYSLK Unmodified 1315.6296 0.62959699 932 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 69.046 68.722 2 0.00047031 87102 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.48 64.143 1572600000 0 23417000 0 57094000 70253000 99972000 102810000 85111000 81501000 154810000 168550000 201660000 99464000 149980000 277940000 37108 932 33106 309065;309066;309067;309068;309069;309070;309071;309072;309073;309074;309075;309076;309077 244638;244639;244640;244641;244642;244643;244644;244645;244646;244647;244648;244649 244640 11 NELFLPGR Unmodified 944.50797 0.50796571 2236 Q13123 IK Protein Red yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 2 1 1 1 62.624 62.749 2 0.0068442 71460 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 94.262 79.48 131910000 0 0 0 9392700 8220100 9983400 9087400 8841200 6806600 13026000 13061000 15656000 13110000 9176900 15548000 37109 2236 33107 309078;309079;309080;309081;309082;309083;309084;309085;309086;309087;309088;309089;309090 244650;244651;244652;244653;244654;244655;244656;244657;244658;244659;244660;244661 244655 11 NELHNLLDK Unmodified 1094.572 0.57202253 3759 Q96BM9 ARL8A ADP-ribosylation factor-like protein 8A no no 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 46.817 46.965 2 0.024342 52800 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 76.282 39.887 8778400 0 0 0 0 0 5470000 0 0 0 0 0 0 0 3308400 0 37110 3759 33108 309091;309092;309093;309094 244662;244663;244664 244662 3 NELILTTESIMK Oxidation (M) 1406.7327 0.73268185 217 O14802 POLR3A DNA-directed RNA polymerase III subunit RPC1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.45 1 6 1 1 1 1 1 1 1 70.364 69.813 2 0.0010503 80198 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 66.595 50.393 14849000 0 1206200 0 0 1658200 0 0 0 2243100 3774700 0 3282400 0 2683900 0 37111 217 33109 309095;309096;309097;309098;309099;309100;309101 244665;244666;244667;244668;244669;244670;244671 244667 293 7 NELLESEMK Oxidation (M) 1107.5118 0.51179004 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 1 0 By MS/MS By matching 10 0 2 1 1 27.904 28.419 2 0.024017 30698 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 45.68 18.718 7656700 0 0 0 0 0 0 0 0 0 0 0 0 5588800 0 2067900 37112 2446 33110 309102;309103 244672 244672 1 NELLPSHPLELSEK Unmodified 1604.841 0.84098675 5080 Q9Y244 POMP Proteasome maturation protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.87 3.54 4 11 1 1 2 1 1 1 1 1 1 1 1 1 1 1 71.181 69.964 2;3 0.0019473 87050 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 110.08 55.537 364620000 25840000 205800000 65206000 2424300 3082500 6744500 5093400 7181600 6367500 7539500 0 9425000 7502700 8861800 3552700 37113 5080 33111 309104;309105;309106;309107;309108;309109;309110;309111;309112;309113;309114;309115;309116;309117;309118 244673;244674;244675;244676;244677;244678;244679 244677 6 NELLQAQNPSELYLSSK Unmodified 1932.9793 0.97927114 4983 Q9UL15 BAG5 BAG family molecular chaperone regulator 5 yes yes 0 0 0 By MS/MS By MS/MS By matching 7.33 3.77 1 2 1 1 1 78.36 76.884 2 2.133E-72 94367 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 178.22 149.16 110220000 0 101810000 0 0 0 0 0 4225000 0 4181000 0 0 0 0 0 37114 4983 33112 309119;309120;309121 244680;244681 244680 2 NELLTTTVPEIQR Unmodified 1512.8148 0.814772 3642 Q92620 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 74.484 74.531 2 8.0898E-05 85934 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 103.34 61.942 28852000 0 0 0 1745100 0 4416500 0 0 0 4572500 7230000 0 0 3607900 7279700 37115 3642 33113 309122;309123;309124;309125;309126;309127 244682;244683;244684;244685;244686;244687 244684 6 NELNVFNR Unmodified 1004.5039 0.50394297 3101 Q7Z4S6 KIF21A Kinesin-like protein KIF21A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 52.672 52.822 2 0.0070823 59687 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 90.862 61.76 43411000 0 0 0 0 3227500 3134400 4540700 3504700 3417100 5821600 6085900 0 0 0 13679000 37116 3101 33114 309128;309129;309130;309131;309132;309133;309134;309135;309136 244688;244689;244690;244691;244692;244693;244694;244695 244688 8 NELPLTHETK Unmodified 1180.6088 0.60880197 4869 Q9UDY8 MALT1 Mucosa-associated lymphoid tissue lymphoma translocation protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 33.885 29.871 2 0.0046541 37914 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 90.15 62.896 90646000 0 84407000 6238500 0 0 0 0 0 0 0 0 0 0 0 0 37117 4869 33115 309137;309138 244696;244697;244698 244698 2 NELQEPCDSPK Unmodified 1315.5714 0.57143018 602 O94913 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 2 1 1 1 1 1 1 1 25.375 25.603 2 2.7516E-05 25982 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 119.75 86.906 48242000 0 0 0 0 3892300 6456300 3960700 4411400 3774900 3883400 4859200 7375400 0 2919200 6708600 37118 602 33116 309139;309140;309141;309142;309143;309144;309145;309146;309147;309148;309149;309150 244699;244700;244701;244702;244703;244704;244705;244706;244707;244708;244709 244702 11 NELQLVDLPTGR Unmodified 1353.7252 0.72522871 4266 Q9BZH6 WDR11 WD repeat-containing protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 78.523 78.519 2 3.1433E-08 90700 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 129.16 116.2 78480000 0 0 0 5430600 5465200 8637600 0 0 0 10904000 0 13636000 7863100 9437600 17106000 37119 4266 33117 309151;309152;309153;309154;309155;309156;309157;309158 244710;244711;244712;244713;244714;244715;244716;244717 244711 8 NELQQTINK Unmodified 1086.5669 0.56693715 214 O14777 NDC80 Kinetochore protein NDC80 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 26.857 27.076 2 0.026363 28059 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.85 15.664 8186200 0 0 0 4176300 0 0 0 0 0 0 0 0 0 0 4009900 37120 214 33118 309159;309160;309161 244718;244719 244718 2 NEMNVMLK 2 Oxidation (M) 1009.4573 0.45725205 1244 P29218 IMPA1 Inositol monophosphatase 1 yes yes 0 2 0 By matching By MS/MS 2 0 2 1 1 22.196 17.807 2 0.04126 23464 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.035 55.41 71284000 7180100 64104000 0 0 0 0 0 0 0 0 0 0 0 0 0 37121 1244 33119 309162;309163 244720 244720 1839 1 NEMNVMLK Oxidation (M) 993.46234 0.46233743 1244 P29218 IMPA1 Inositol monophosphatase 1 yes yes 0 1 0 By MS/MS 2 0 1 1 30.933 26.481 2 0.013649 34606 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.429 34.447 113010000 0 113010000 0 0 0 0 0 0 0 0 0 0 0 0 0 37122 1244 33119 309164 244721;244722 244722 1839 2 NEMNVMLK Unmodified 977.46742 0.4674228 1244 P29218 IMPA1 Inositol monophosphatase 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 52.713 47.856 2 0.033116 62177 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.616 24.026 204800000 0 203360000 1436400 0 0 0 0 0 0 0 0 0 0 0 0 37123 1244 33119 309165;309166 244723;244724 244723 2 NENARQQLER Unmodified 1256.6222 0.62216062 1356 P35579 MYH9 Myosin-9 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 13.074 9.944 3 0.019167 12541 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 45.829 33.252 26994000 4681400 0 22313000 0 0 0 0 0 0 0 0 0 0 0 0 37124 1356 33120 309167;309168 244725 244725 1 NENARQQLERQNK Unmodified 1626.8186 0.8186286 1356 P35579 MYH9 Myosin-9 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 2 1 1 12.468 9.0921 3 0.0025753 14150 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.744 69.944 1111000000 1083300000 7496400 20198000 0 0 0 0 0 0 0 0 0 0 0 0 37125 1356 33121 309169;309170;309171;309172 244726;244727;244728 244727 0 NENEEILERPAQLANAR Unmodified 1965.9868 0.98681614 4893 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.025 62.124 3 5.9996E-14 70911 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 95.347 86.868 279030000 0 0 0 12606000 21521000 19138000 16448000 17264000 16102000 24494000 34264000 38157000 22673000 17600000 38762000 37126 4893 33122 309173;309174;309175;309176;309177;309178;309179;309180;309181;309182;309183;309184 244729;244730;244731;244732;244733;244734;244735;244736;244737;244738;244739;244740;244741;244742 244729 14 NENEVGRCK Unmodified 1104.4982 0.49820566 411 O60547 GMDS GDP-mannose 4,6 dehydratase yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 5.6055 2.3047 2 0.0034695 4328 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 133.23 84.673 57701000 0 57701000 0 0 0 0 0 0 0 0 0 0 0 0 0 37127 411 33123 309185;309186 244743;244744;244745;244746 244743 4 NENFEIIIVDTSGRHK Unmodified 1870.9537 0.95372509 1826 P61011 SRP54 Signal recognition particle 54 kDa protein yes yes 0 0 1 By MS/MS 2 0 1 1 81.714 73.584 4 0.00029066 96313 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.574 69.914 26649000 26649000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37128 1826 33124 309187 244747 244747 1 NENGAPEDEENFEEAIK Unmodified 1933.8177 0.8177447 2318 Q13564 NAE1 NEDD8-activating enzyme E1 regulatory subunit yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 62.871 61.049 2 1.4535E-09 70410 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 95.631 71.34 61572000 12012000 20522000 0 0 0 0 0 0 0 2605100 6963400 0 2257400 5511500 11700000 37129 2318 33125 309188;309189;309190;309191;309192;309193;309194 244748;244749;244750;244751;244752 244751 5 NENLAANFLLQQNFDED Unmodified 1993.9017 0.9017491 1746 P54727 RAD23B UV excision repair protein RAD23 homolog B yes yes 0 0 0 By MS/MS By MS/MS 2 0.816 3 3 3 4 5 96.276 92.387 2;3 4.9999E-09 111967 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 142.51 137.01 785860000 43428000 742440000 0 0 0 0 0 0 0 0 0 0 0 0 0 37130 1746 33126 309195;309196;309197;309198;309199;309200;309201;309202;309203 244753;244754;244755;244756;244757;244758;244759;244760;244761;244762 244753 9 NENLAANFLLSQNFDDE Unmodified 1952.8752 0.8752 1745 P54725 RAD23A UV excision repair protein RAD23 homolog A yes yes 0 0 0 By MS/MS By MS/MS 2.12 0.781 2 3 3 3 5 98.273 95.569 2;3 1.6319E-63 91236 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 166.08 155.56 1001800000 120830000 880940000 0 0 0 0 0 0 0 0 0 0 0 0 0 37131 1745 33127 309204;309205;309206;309207;309208;309209;309210;309211 244763;244764;244765;244766;244767;244768;244769;244770 244768 6 NENLNDDKLDEENPK Unmodified 1785.8017 0.80170071 1248 P29374 ARID4A AT-rich interactive domain-containing protein 4A yes yes 0 0 1 By matching By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 29.674 29.937 3 0.042821 31425 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 26.548 19.967 14262000 0 0 0 0 0 0 1652300 0 0 3311600 2981600 0 3405800 2910400 0 37132 1248 33128 309212;309213;309214;309215;309216 244771 244771 1 NENLQESEILSQPK Unmodified 1627.8053 0.80532952 3206 Q86YC2 PALB2 Partner and localizer of BRCA2 yes yes 0 0 0 By MS/MS 2 0 1 1 14.658 10.61 3 0.0012211 15919 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.761 16.663 20997000 20997000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37133 3206 33129 309217 244772 244772 1 NENNSHAFMK Oxidation (M) 1206.5088 0.50877035 2647 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 0 1 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 8.5106 5.5638 3 0.011755 7508 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 68.557 55.602 184720000 0 119110000 65619000 0 0 0 0 0 0 0 0 0 0 0 0 37134 2647 33130 309218;309219;309220 244773;244774 244773 4312 0 NENNSHAFMK Unmodified 1190.5139 0.51385572 2647 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 0 0 0 By matching By matching By MS/MS 2 0 3 1 1 1 17.748 14.28 2 0.0054424 17688 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 85.676 61.521 35429000 12702000 13797000 8929200 0 0 0 0 0 0 0 0 0 0 0 0 37135 2647 33130 309221;309222;309223 244775 244775 1 NENPVDYTVQIPPSTTYAITPMK Unmodified 2578.2625 0.26250522 2207 Q12906 ILF3 Interleukin enhancer-binding factor 3 yes yes 0 0 0 By MS/MS 2 0 2 2 90.162 85.266 2;3 3.6631E-67 106456 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 176.94 170.36 135800000 0 135800000 0 0 0 0 0 0 0 0 0 0 0 0 0 37136 2207 33131 309224;309225 244776;244777;244778;244779;244780 244780 5 NENSEVDTSAGSGSAPSVLHQR Unmodified 2241.0258 0.025780418 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.413 41.59 3 9.5629E-21 46458 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 90.316 86.822 104860000 0 0 0 8841700 5843700 5581900 8146100 5115100 5953700 10844000 10936000 11995000 8267000 7540000 15797000 37137 3443 33132 309226;309227;309228;309229;309230;309231;309232;309233;309234;309235;309236;309237 244781;244782;244783;244784;244785;244786;244787;244788;244789;244790;244791;244792 244787 12 NENSGNSWNK Unmodified 1148.4847 0.48466409 4030 Q99590 SCAF11 Protein SCAF11 yes yes 0 0 0 By MS/MS 10 0 1 1 7.9962 8.152 2 0.034153 6349 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 41.876 16.953 804020 0 0 0 0 0 0 0 804020 0 0 0 0 0 0 0 37138 4030 33133 309238 244793 244793 1 NENTFLDLTVQQIEHLNK Unmodified 2155.0909 0.090946857 2638 Q16851 UGP2 UTP--glucose-1-phosphate uridylyltransferase yes yes 0 0 0 By MS/MS 2 0 1 1 46.511 42.66 3 0.021446 53723 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 27.496 7.1284 6355700 0 0 6355700 0 0 0 0 0 0 0 0 0 0 0 0 37139 2638 33134 309239 244794 244794 1 NEPLSLPELTK Unmodified 1239.6711 0.67106787 3518 Q8TEQ6 GEMIN5 Gem-associated protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.17 3.85 2 1 3 2 1 1 1 1 80.039 76.502 2 0.0013273 94915 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.21 101.42 510010000 0 502510000 7498700 0 0 0 0 0 0 0 0 0 0 0 0 37140 3518 33135 309240;309241;309242;309243;309244;309245 244795;244796;244797;244798;244799;244800;244801 244796 7 NEPQMDSNYAR Unmodified 1323.5514 0.55136344 4995 Q9ULH7 MKL2 MKL/myocardin-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 27.331 27.334 2 0.02913 29379 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 54.608 43.118 2633300 0 0 0 0 0 2633300 0 0 0 0 0 0 0 0 0 37141 4995 33136 309246;309247 244802;244803 244803 2 NEPQNATGAPGR Unmodified 1210.5691 0.56906242 1646 P51148 RAB5C Ras-related protein Rab-5C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 10.79 10.929 2 2.8515E-08 9779 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 132.01 97.758 1099200000 0 0 0 75875000 50242000 71437000 82167000 73330000 48095000 98246000 103840000 163790000 89511000 92339000 150310000 37142 1646 33137 309248;309249;309250;309251;309252;309253;309254;309255;309256;309257;309258;309259 244804;244805;244806;244807;244808;244809;244810;244811;244812;244813;244814;244815;244816;244817;244818;244819;244820;244821;244822;244823;244824;244825;244826 244826 22 NEPQNPGANSAR Unmodified 1253.5749 0.57487608 1104 P20339 RAB5A Ras-related protein Rab-5A yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 8.8135 8.9469 2 2.4602E-05 6016 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 101.38 66.994 115040000 0 0 0 8868600 6145700 5798200 9470300 6135800 4315600 8411400 24191000 15027000 9368500 6764700 10544000 37143 1104 33138 309260;309261;309262;309263;309264;309265;309266;309267;309268;309269;309270;309271 244827;244828;244829;244830;244831;244832;244833;244834;244835 244830 8 NEPVVFPEEPEISEELK Unmodified 1983.9677 0.9677034 3352 Q8N5S9 CAMKK1 Calcium/calmodulin-dependent protein kinase kinase 1 yes yes 0 0 0 By MS/MS By MS/MS 4.25 3.34 2 1 1 3 1 87.551 84.356 2;3 3.2803E-13 104592 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 139.3 123.37 89950000 0 85895000 0 0 0 0 0 0 0 0 0 0 0 0 4055300 37144 3352 33139 309272;309273;309274;309275 244836;244837;244838;244839;244840 244836 5 NEQAVQSAQTIQQLEDQLQQK Unmodified 2426.2037 0.20374478 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 83.986 83.262 3 2.3729E-09 102612 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.166 77.772 86340000 0 37888000 0 0 2852900 3314200 1860300 3150400 0 0 7467800 11729000 0 7348700 10728000 37145 2446 33140 309276;309277;309278;309279;309280;309281;309282;309283;309284;309285 244841;244842;244843;244844;244845 244841 5 NEQDAYAINSYTR Unmodified 1543.6903 0.69029976 1177 P24752 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 47.474 48.211 2 0.0029329 53222 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.363 73.205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37146 1177 33141 309286;309287 244846;244847 244846 2 NEQGEPEDLK Unmodified 1157.52 0.52004654 2838 Q63HN8 RNF213 E3 ubiquitin-protein ligase RNF213 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 17.628 18.183 2 0.012655 19040 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 68.016 40.886 4845800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4845800 37147 2838 33142 309288;309289;309290 244848;244849;244850 244848 3 NEQQLFYISQPGSSVVTSLSPGEAVK Unmodified 2764.3919 0.39193948 1614 P49959 MRE11A Double-strand break repair protein MRE11A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.29 3.67 4 2 11 1 4 1 1 1 1 1 2 1 1 1 2 89.424 87.916 2;3 3.1336E-192 108806 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 271.48 260.21 628590000 5558200 534660000 3236900 0 2626000 2932800 0 4578700 3754900 21645000 9928900 7510400 0 4787900 27369000 37148 1614 33143 309291;309292;309293;309294;309295;309296;309297;309298;309299;309300;309301;309302;309303;309304;309305;309306;309307 244851;244852;244853;244854;244855;244856;244857;244858;244859;244860;244861;244862;244863;244864;244865;244866;244867 244856 17 NERLQALLGDNEK Unmodified 1498.774 0.77396981 3422 Q8NEB9 PIK3C3 Phosphatidylinositol 3-kinase catalytic subunit type 3 yes yes 0 0 1 By MS/MS 2 0 1 1 65.627 57.338 3 0.041702 77108 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 23.489 17.805 7576800 7576800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37149 3422 33144 309308 244868 244868 1 NESELEAHLCR Unmodified 1356.6092 0.60921267 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 13 1 1 1 1 2 1 1 1 1 2 1 38.547 38.784 2;3 0.0076187 43011 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 48.004 39.275 112600000 0 0 0 0 4311300 10923000 5256500 5267400 10591000 11370000 11001000 10012000 11197000 14648000 18019000 37150 2361 33145 309309;309310;309311;309312;309313;309314;309315;309316;309317;309318;309319;309320;309321 244869;244870;244871;244872 244870 4 NESGTWIQYGEEK Unmodified 1539.6842 0.68415175 3073 Q7Z2W4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 56.196 56.257 2 0.00036605 64004 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 91.936 64.194 36666000 0 0 0 0 3218600 6037700 5890200 0 6385900 7524300 7609400 0 0 0 0 37151 3073 33146 309322;309323;309324;309325;309326;309327;309328 244873;244874;244875;244876;244877;244878;244879 244873 7 NESLTEHPR Unmodified 1081.5152 0.51523593 4030 Q99590 SCAF11 Protein SCAF11 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By matching 10 0 8 1 1 1 1 1 1 1 1 11.22 11.419 2 0.00355 8819 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 89.698 78.988 30018000 0 0 0 0 1913600 0 0 812700 2385000 3795800 4708800 0 6205900 4521100 5674900 37152 4030 33147 309329;309330;309331;309332;309333;309334;309335;309336 244880;244881 244881 2 NESLTEHPRSTELPK Unmodified 1736.8693 0.86932676 4030 Q99590 SCAF11 Protein SCAF11 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 37.215 33.039 3 0.0041622 41447 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 60.196 48.935 26221000 0 12360000 13861000 0 0 0 0 0 0 0 0 0 0 0 0 37153 4030 33148 309337;309338 244882;244883;244884 244884 3 NESSFASHK Unmodified 1005.4516 0.45157304 3793 Q96DB5 RMDN1 Regulator of microtubule dynamics protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 8.1433 4.8403 2 0.01802 7101 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.149 63.373 44702000 0 44702000 0 0 0 0 0 0 0 0 0 0 0 0 0 37154 3793 33149 309339;309340 244885 244885 1 NESSNASEEEACEK Unmodified 1582.6053 0.60530909 4428 Q9H6Z4 RANBP3 Ran-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.79 2.98 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 8.3134 8.1402 2 8.4482E-73 5821 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 227.37 223.22 107230000 10446000 0 0 4015100 3003600 4302000 3864700 4012500 3641500 6971000 19627000 15224000 7014000 9081300 16026000 37155 4428 33150 309341;309342;309343;309344;309345;309346;309347;309348;309349;309350;309351;309352;309353;309354 244886;244887;244888;244889;244890;244891;244892;244893;244894 244891 9 NESSPAPPDSDADK Unmodified 1428.6005 0.6004817 3413 Q8ND04 SMG8 Protein SMG8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 17.109 17.228 2 0.00046881 16262 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 73.067 65.023 16960000 0 0 0 0 1926100 2725400 1911700 0 1536500 2393200 3054300 0 3412700 0 0 37156 3413 33151 309355;309356;309357;309358;309359;309360;309361 244895;244896;244897;244898;244899;244900 244899 6 NESTIEQIDK Unmodified 1175.567 0.56699673 2113 Q05209 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.454 31.64 2 0.0016114 34398 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 89.886 60.724 160300000 0 0 0 7587600 9460800 15429000 11009000 10046000 8667600 14103000 15807000 24132000 12954000 9878900 21222000 37157 2113 33152 309362;309363;309364;309365;309366;309367;309368;309369;309370;309371;309372;309373 244901;244902;244903;244904;244905;244906;244907 244902 7 NESVPEVEALLAR Unmodified 1425.7464 0.74635808 4630 Q9NSV4 DIAPH3 Protein diaphanous homolog 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 83.192 83.256 2 6.4519E-05 96530 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 93.258 87.477 388890000 0 0 0 7799700 20995000 22363000 18755000 24169000 23133000 47044000 45633000 56035000 33238000 35765000 53961000 37158 4630 33153 309374;309375;309376;309377;309378;309379;309380;309381;309382;309383;309384;309385 244908;244909;244910;244911;244912;244913;244914;244915;244916;244917;244918;244919;244920 244910 13 NETDEDGWTTVRR Unmodified 1577.707 0.70701246 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 35.889 34.561 3 5.3826E-06 39739 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 94.191 66.528 35608000 0 0 1877800 0 0 0 0 0 0 0 0 0 0 0 33730000 37159 2378 33154 309386;309387;309388;309389;309390;309391;309392;309393;309394 244921;244922;244923;244924;244925;244926;244927;244928;244929 244925 9 NETGGGEGIEVLK Unmodified 1301.6463 0.64630969 1554 P48739 PITPNB Phosphatidylinositol transfer protein beta isoform yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 54.903 47.933 2 9.0471E-10 62290 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.99 98.946 689580000 30418000 659160000 0 0 0 0 0 0 0 0 0 0 0 0 0 37160 1554 33155 309395;309396 244930;244931;244932;244933 244931 4 NETGGGEGVEVLVNEPYEK Unmodified 2018.9433 0.94327957 2031 Q00169 PITPNA Phosphatidylinositol transfer protein alpha isoform yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.91 3.42 2 1 8 1 2 1 1 1 1 1 1 1 1 71.802 70.428 2 0 87619 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 366.95 347.85 283960000 13316000 231520000 0 0 0 5707200 1663800 0 1992200 4730800 6688800 4295900 0 4021100 10029000 37161 2031 33156 309397;309398;309399;309400;309401;309402;309403;309404;309405;309406;309407 244934;244935;244936;244937;244938;244939;244940;244941;244942;244943;244944 244936 11 NETHAEVLEQQNELCPYESK Unmodified 2417.0805 0.080518105 1238 P28715 ERCC5 DNA repair protein complementing XP-G cells yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 7 3.69 1 1 3 2 1 1 1 59.115 56.539 3 2.5923E-82 72623 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.13 101.18 54734000 0 46778000 0 0 0 0 0 0 2871100 0 0 0 5085200 0 0 37162 1238 33157 309408;309409;309410;309411;309412 244945;244946;244947;244948;244949;244950 244947 6 NETIAQEDK Unmodified 1046.488 0.48801813 3548 Q8WUM0 NUP133 Nuclear pore complex protein Nup133 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 11.035 10.179 2 0.0032704 9607 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 90.601 54.206 28636000 3520800 3805800 0 3355700 2106600 3992100 0 2821200 0 0 0 0 0 4160100 4873700 37163 3548 33158 309413;309414;309415;309416;309417;309418;309419;309420;309421 244951;244952;244953;244954;244955;244956;244957;244958;244959;244960 244951 10 NETLGGTCLNVGCIPSK Unmodified 1818.8604 0.86041834 890 P09622 DLD Dihydrolipoyl dehydrogenase, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 75.605 70.665 2 7.1733E-35 88443 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 156.24 132.87 40845000 0 40845000 0 0 0 0 0 0 0 0 0 0 0 0 0 37164 890 33159 309422 244961 244961 1 NETSAPFK Unmodified 892.42905 0.42904669 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21.83 21.188 2 0.0065186 22252 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 100.19 55.577 2216300000 97595000 1176400000 13741000 46207000 41996000 91449000 64764000 43746000 43218000 91236000 108830000 116420000 69935000 72359000 138440000 37165 848 33160 309423;309424;309425;309426;309427;309428;309429;309430;309431;309432;309433;309434;309435;309436;309437 244962;244963;244964;244965;244966;244967;244968;244969;244970;244971;244972;244973 244968 7 NETVSEILPSTCIVTLVPGIPTGDEK Unmodified 2768.4154 0.41537704 2456 Q14966 ZNF638 Zinc finger protein 638 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 97.753 93.732 3 2.2935E-06 112695 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 64.547 57.898 47148000 0 47148000 0 0 0 0 0 0 0 0 0 0 0 0 0 37166 2456 33161 309438;309439 244974;244975 244975 2 NETYNSHPLLVK Unmodified 1413.7252 0.72522871 3465 Q8NI27 THOC2 THO complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.15 3.37 6 20 2 2 2 1 2 2 1 1 1 2 2 2 2 2 2 42.234 41.068 2;3 0.0020685 52763 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 88.338 79.608 615550000 208170000 86567000 54883000 12590000 14362000 21435000 21453000 11942000 14477000 27578000 29672000 28197000 32098000 23478000 28648000 37167 3465 33162 309440;309441;309442;309443;309444;309445;309446;309447;309448;309449;309450;309451;309452;309453;309454;309455;309456;309457;309458;309459;309460;309461;309462;309463;309464;309465 244976;244977;244978;244979;244980;244981;244982;244983;244984;244985;244986;244987;244988;244989 244983 10 NEVAAEVAK Unmodified 929.48181 0.48181054 1779 P56192 MARS Methionine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 6.8 3.94 1 2 1 6 2 2 1 1 1 1 1 1 31.352 30.545 2 0.005264 19985 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 78.516 42.331 529850000 58021000 392730000 0 0 0 0 23561000 0 17642000 0 1002500 0 0 36887000 0 37168 1779 33163 309466;309467;309468;309469;309470;309471;309472;309473;309474;309475 244990;244991;244992;244993;244994;244995;244996;244997;244998;244999 244991 9 NEVAILQSLR Unmodified 1141.6455 0.64552182 4273 Q9BZL6 PRKD2 Serine/threonine-protein kinase D2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.19 76.248 2 0.0028003 87997 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 79.974 36.166 47534000 0 0 0 1885300 3147000 3290700 3681300 5685200 1914800 3487600 4782900 7353100 3513700 3051700 5740800 37169 4273 33164 309476;309477;309478;309479;309480;309481;309482;309483;309484;309485;309486;309487 245000;245001;245002;245003;245004;245005;245006;245007;245008 245000 9 NEVDLVVHSLK Unmodified 1251.6823 0.68230126 865 P08397 HMBS Porphobilinogen deaminase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.18 3.66 4 3 4 1 4 2 1 1 1 1 71.097 68.654 2;3 3.8477E-09 84520 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 130.98 95.039 310120000 304770 124960000 140560000 0 0 0 0 5357700 0 0 9582700 9744100 0 0 19610000 37170 865 33165 309488;309489;309490;309491;309492;309493;309494;309495;309496;309497;309498 245009;245010;245011;245012;245013;245014;245015;245016;245017 245017 7 NEVDMQVLHLLGPK Oxidation (M) 1607.8341 0.83412723 1528 P47897 QARS Glutamine--tRNA ligase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.82 3.56 6 16 2 2 2 1 1 3 1 1 2 1 2 2 2 80.631 79.148 3 4.8349E-07 100489 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.65 92.857 388590000 55405000 144650000 47575000 3452100 3566400 8491100 0 8473400 6003400 19134000 8057600 22259000 0 15868000 45649000 37171 1528 33166 309499;309500;309501;309502;309503;309504;309505;309506;309507;309508;309509;309510;309511;309512;309513;309514;309515;309516;309517;309518;309519;309520 245018;245019;245020;245021;245022;245023;245024;245025;245026;245027;245028;245029;245030;245031;245032;245033 245022 2429 15 NEVDMQVLHLLGPK Unmodified 1591.8392 0.83921261 1528 P47897 QARS Glutamine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 89.157 84.87 3 2.2102E-06 107538 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.73 87.186 106080000 34299000 52801000 0 0 0 0 0 0 0 0 0 0 0 0 18983000 37172 1528 33166 309521;309522;309523 245034;245035;245036 245034 3 NEVEEGVSPSQPSMDGILDAIAK Unmodified 2385.137 0.13697035 419 O60645 EXOC3 Exocyst complex component 3 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 94.226 90.18 3 1.2185E-13 111919 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.922 68.295 62618000 0 62618000 0 0 0 0 0 0 0 0 0 0 0 0 0 37173 419 33167 309524;309525 245037 245037 1 NEVERLK Unmodified 886.48723 0.48723027 2598 Q16204 CCDC6 Coiled-coil domain-containing protein 6 yes yes 0 0 1 By matching By MS/MS By MS/MS 2 0 3 1 1 1 14.175 10.96 2 0.027008 13929 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 133.6 29.152 268090000 49757000 52908000 165430000 0 0 0 0 0 0 0 0 0 0 0 0 37174 2598 33168 309526;309527;309528 245038 245038 0 NEVGRSGAWK Unmodified 1102.552 0.55195579 1406 P39880 CUX1 Homeobox protein cut-like 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 20.099 16.39 2 0.01464 23611 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 114.4 55.484 24429000 22827000 0 1602000 0 0 0 0 0 0 0 0 0 0 0 0 37175 1406 33169 309529;309530 245039 245039 0 NEVGVLRK Unmodified 913.53451 0.53451481 1011 P15056 BRAF Serine/threonine-protein kinase B-raf yes yes 0 0 1 By MS/MS By matching 2 0 2 1 1 22.59 18.7 2 0.03518 27031 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 113.7 42.783 58413000 53678000 0 4734600 0 0 0 0 0 0 0 0 0 0 0 0 37176 1011 33170 309531;309532 245040 245040 1 NEVHEREGWPNSPYGVSK Unmodified 2083.9712 0.97116607 548 O75828 CBR3 Carbonyl reductase [NADPH] 3 yes yes 0 0 1 By MS/MS 2 0 1 1 53.765 45.702 3 0.0018652 62849 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.392 38.399 10949000 10949000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37177 548 33171 309533 245041 245041 1 NEVLEDHVQNNAEQLGAFAAGVK Unmodified 2452.1983 0.19826548 3890 Q96JB2 COG3 Conserved oligomeric Golgi complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 81.692 78.076 3 8.0028E-07 94668 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 45.88 42.217 62665000 0 58988000 3676500 0 0 0 0 0 0 0 0 0 0 0 0 37178 3890 33172 309534;309535 245042 245042 1 NEVLMVNIGSLSTGGR Oxidation (M) 1661.8407 0.84066917 1427 P41091;Q2VIR3 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.574 79.677 2 1.8414E-31 91252 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 147.24 133.09 119170000 0 0 0 0 5074700 9825900 5542900 5011600 8266200 16615000 16579000 15715000 5994300 10121000 20422000 37179 1427 33173 309536;309537;309538;309539;309540;309541;309542;309543;309544;309545;309546 245043;245044;245045;245046;245047;245048;245049;245050;245051;245052;245053 245050 2247 11 NEVLMVNIGSLSTGGR Unmodified 1645.8458 0.84575455 1427 P41091;Q2VIR3 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein yes no 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 83.789 83.914 2 0.00010535 96357 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 88.441 75.673 24419000 0 0 0 0 0 4000800 0 0 0 4919400 3507800 0 0 3409400 8581100 37180 1427 33173 309547;309548;309549;309550;309551;309552 245054;245055;245056;245057 245056 4 NEVNGTSEDIK Unmodified 1204.5572 0.55716033 630 O95232 LUC7L3 Luc7-like protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.339 18.529 2 1.9284E-05 18297 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 125.56 111.26 192240000 0 0 0 12359000 15744000 15233000 12799000 15261000 12799000 16394000 16517000 22064000 21230000 12393000 19448000 37181 630 33174 309553;309554;309555;309556;309557;309558;309559;309560;309561;309562;309563;309564 245058;245059;245060;245061;245062;245063;245064;245065;245066;245067;245068;245069;245070;245071 245069 14 NEVNVPCLK Unmodified 1071.5383 0.53827956 603 O94915 FRYL Protein furry homolog-like yes yes 0 0 0 By MS/MS 2 0 1 1 55.665 49.85 2 0.0074156 64677 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.815 74.515 21437000 0 21437000 0 0 0 0 0 0 0 0 0 0 0 0 0 37182 603 33175 309565 245072;245073;245074 245074 3 NEVSLVAEGFLPEDGSGR Unmodified 1874.901 0.90102082 624 O95163 IKBKAP Elongator complex protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 84.319 84.439 2 1.3133E-19 97511 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 127.36 96.466 59075000 0 0 0 0 0 5404900 0 0 0 9076300 9676400 8311800 4384800 6787700 15433000 37183 624 33176 309566;309567;309568;309569;309570;309571;309572;309573;309574 245075;245076;245077;245078;245079;245080;245081;245082;245083 245077 9 NEYAAQLQNFNGEQHK Unmodified 1889.8656 0.86563837 2766 Q5T0N5 FNBP1L Formin-binding protein 1-like yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 54.727 49.863 3 3.1351E-07 61696 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 100.18 96.856 67086000 0 64025000 3061300 0 0 0 0 0 0 0 0 0 0 0 0 37184 2766 33177 309575;309576;309577 245084;245085 245085 1 NFAFLEFR Unmodified 1042.5236 0.52361577 1202 P26368 U2AF2 Splicing factor U2AF 65 kDa subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 87.099 87.168 2 0.0067631 101057 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 121.99 101.43 266610000 0 0 0 13318000 8677200 32055000 14747000 17554000 22713000 26971000 14742000 20817000 21542000 17226000 56245000 37185 1202 33178 309578;309579;309580;309581;309582;309583;309584;309585;309586;309587;309588;309589 245086;245087;245088;245089;245090;245091;245092;245093;245094;245095;245096 245087 11 NFALLGVGTSK Unmodified 1105.6132 0.61315906 3 A0AVT1 UBA6 Ubiquitin-like modifier-activating enzyme 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS 7.42 3.66 3 1 8 1 2 1 1 1 1 1 1 1 1 1 77.113 75.609 2 0.0047166 96843 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.16 59.022 213180000 122410000 24998000 11348000 0 3354800 8849100 2717200 0 0 5035200 6016300 5953100 0 6242700 16248000 37186 3 33179 309590;309591;309592;309593;309594;309595;309596;309597;309598;309599;309600;309601 245097;245098;245099;245100;245101;245102;245103;245104 245102 7 NFAMIGLGCGEGGEIIVTDMDTIEK 2 Oxidation (M) 2701.2285 0.22850425 1137 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 2 0 By MS/MS By MS/MS 3 0 2 1 1 88.554 85.164 3 0.00012696 86832 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 43.523 40.59 7264700 4177000 3087700 0 0 0 0 0 0 0 0 0 0 0 0 0 37187 1137 33180 309602;309603 245105;245106 245106 1635;1636 2 NFAMIGLGCGEGGEIIVTDMDTIEK Unmodified 2669.2387 0.23867501 1137 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 By MS/MS 3 0 1 1 97.188 93.676 3 5.5703E-05 97003 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 55.588 52.939 13485000 13485000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37188 1137 33180 309604 245107 245107 1 NFAMIGLGCGEGGEIIVTDMDTIEK Oxidation (M) 2685.2336 0.23358963 1137 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 1 0 By MS/MS 2 0 1 1 96.343 88.212 3 9.2655E-22 114040 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.511 80.151 36987000 36987000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37189 1137 33180 309605 245108;245109;245110 245108 1635;1636 3 NFAQLTVSGSR Unmodified 1178.6044 0.60438529 1347 P35249 RFC4 Replication factor C subunit 4 yes yes 0 0 0 By MS/MS 10 0 1 1 51.638 52.315 2 1.0253E-20 58252 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 167.1 108.18 109670000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 109670000 37190 1347 33181 309606 245111 245111 1 NFATSLYSMIK Oxidation (M) 1289.6326 0.63257388 873 P08758 ANXA5 Annexin A5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 6.93 3.77 4 2 9 2 3 1 1 2 2 2 2 80.983 79.06 2 2.0256E-06 99636 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.33 100.55 453890000 152240000 119880000 3906200 0 1843500 0 0 0 0 0 30838000 22544000 0 18848000 103790000 37191 873 33182 309607;309608;309609;309610;309611;309612;309613;309614;309615;309616;309617;309618;309619;309620;309621 245112;245113;245114;245115;245116;245117;245118;245119;245120;245121;245122;245123;245124 245112 1125 10 NFATSLYSMIK Unmodified 1273.6377 0.63765925 873 P08758 ANXA5 Annexin A5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4 3.46 3 1 1 2 1 93.315 89.031 2 0.0038839 102838 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.823 50.776 236470000 65829000 164640000 0 0 0 0 0 0 0 0 0 0 0 0 6004200 37192 873 33182 309622;309623;309624;309625 245125;245126;245127;245128;245129 245127 5 NFAVIYLVDITEVPDFNK Unmodified 2096.083 0.083007933 2007 P83876 TXNL4A Thioredoxin-like protein 4A yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 100.73 94.13 2;3 6.3337E-96 119667 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 203.39 173.39 26068000 26068000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37193 2007 33183 309626;309627;309628 245130;245131;245132 245131 3 NFAVLQK Unmodified 818.46504 0.46503826 465 O75153 CLUH Clustered mitochondria protein homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7 3.87 3 5 1 1 1 1 1 1 1 1 46.251 44.221 2 0.023392 48477 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 87.582 29.03 617390000 292080000 224080000 27401000 0 0 10154000 0 9173400 8457800 0 0 0 0 17534000 28504000 37194 465 33184 309629;309630;309631;309632;309633;309634;309635;309636 245133;245134;245135;245136 245136 4 NFDDATMK Oxidation (M) 956.39095 0.39094662 4008 Q99439 CNN2 Calponin-2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.326 13.481 2 0.0072484 12584 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 77.923 62.701 108310000 0 0 0 6554700 6130500 8583700 8655500 6610100 6234600 10270000 9976600 13002000 12526000 7968200 11799000 37195 4008 33185 309637;309638;309639;309640;309641;309642;309643;309644;309645;309646;309647;309648 245137;245138;245139;245140;245141;245142;245143;245144 245138 5494 8 NFDDATMK Unmodified 940.39603 0.396032 4008 Q99439 CNN2 Calponin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 25.756 25.957 2 0.017183 27586 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 66.073 50.852 328180000 0 0 0 18987000 14047000 20065000 18626000 22304000 15625000 37878000 31169000 37908000 31685000 28414000 51468000 37196 4008 33185 309649;309650;309651;309652;309653;309654;309655;309656;309657;309658;309659;309660 245145;245146;245147;245148;245149 245146 5 NFDDEDSVDGNRPSSASSTSSK Unmodified 2300.9629 0.96290539 3094 Q7Z460 CLASP1 CLIP-associating protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.523 28.718 3 4.3088E-26 31030 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 94.837 91.739 231870000 0 0 0 12738000 12532000 15102000 15446000 12741000 17228000 20927000 28636000 26874000 19594000 18298000 31753000 37197 3094 33186 309661;309662;309663;309664;309665;309666;309667;309668;309669;309670;309671;309672 245150;245151;245152;245153;245154;245155;245156;245157;245158;245159;245160;245161;245162;245163;245164 245158 15 NFDEESNASMSTAR Unmodified 1557.6365 0.63654963 4814 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 0 0 0 By MS/MS 10 0 1 1 33.344 34.065 2 0.0011818 36359 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.441 77.918 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37198 4814 33187 309673 245165 245165 1 NFDEESNASMSTARDETR Unmodified 2058.8549 0.85487527 4814 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 35.68 35.873 3 8.3044E-05 39026 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 62.475 52.31 64851000 0 0 0 2553400 2990500 4642800 0 5066700 5237700 4761300 9601800 12981000 5145900 5233800 6636800 37199 4814 33188 309674;309675;309676;309677;309678;309679;309680;309681;309682;309683;309684 245166;245167;245168;245169;245170;245171;245172;245173;245174;245175;245176 245170 11 NFDEESNASMSTARDETR Oxidation (M) 2074.8498 0.84978989 4814 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 0 1 1 By MS/MS By matching By MS/MS 10 0 3 1 1 1 24.637 24.855 3 0.00091894 26465 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 41.348 40.769 13558000 0 0 0 0 0 0 4786800 6020600 0 0 2750400 0 0 0 0 37200 4814 33188 309685;309686;309687 245177 245177 6178 1 NFDFEGSLSPVIAPK Unmodified 1619.8195 0.81952302 4345 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 85.777 85.884 2 9.4779E-06 99440 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 80.979 62.668 43756000 0 0 0 0 2106000 2251200 2023800 3078000 2784000 6568500 4454800 4750700 3565700 4352400 7820700 37201 4345 33189 309688;309689;309690;309691;309692;309693;309694;309695;309696;309697;309698 245178;245179;245180;245181;245182;245183;245184;245185;245186 245182 9 NFDGLEEIDR Unmodified 1206.5517 0.55168102 2551 Q15596 NCOA2 Nuclear receptor coactivator 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.403 65.491 2 0.0049356 75196 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 80.239 59.337 65551000 0 0 0 3942500 4408000 5210100 5054400 5279300 3718700 5950200 4211900 8430400 6144000 5723000 7479000 37202 2551 33190 309699;309700;309701;309702;309703;309704;309705;309706;309707;309708;309709;309710 245187;245188;245189;245190;245191;245192;245193 245187 7 NFDLRPGVIVR Unmodified 1284.7303 0.73025451 1297 P31153;Q00266 MAT2A;MAT1A S-adenosylmethionine synthase isoform type-2;S-adenosylmethionine synthase isoform type-1 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.302 70.377 3 0.00038676 79988 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.763 71.076 473610000 0 0 0 9754200 6313800 23506000 14693000 15568000 19810000 18229000 38978000 67013000 24305000 45156000 190280000 37203 1297 33191 309711;309712;309713;309714;309715;309716;309717;309718;309719;309720;309721;309722 245194;245195;245196;245197;245198;245199;245200 245195 4 NFDQEGLVEHCK Unmodified 1474.6511 0.65107749 5215 Q9Y508 RNF114 E3 ubiquitin-protein ligase RNF114 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By matching By MS/MS 7.7 3.52 2 1 7 2 1 1 1 1 1 1 1 1 40.797 39.511 3 8.329E-11 51287 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.97 112.83 90147000 0 55511000 6956300 2676800 0 2293600 2471600 0 3600200 5267300 0 0 0 4565100 6804800 37204 5215 33192 309723;309724;309725;309726;309727;309728;309729;309730;309731;309732 245201;245202;245203;245204;245205;245206 245202 5 NFDSLESLISAIQGDIEEAK Unmodified 2178.0692 0.069208362 3716 Q969G6 RFK Riboflavin kinase yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 103.68 98.177 3 6.1043E-59 122958 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 137.13 132.87 38772000 29741000 9030700 0 0 0 0 0 0 0 0 0 0 0 0 0 37205 3716 33193 309733;309734;309735 245207;245208;245209 245209 3 NFDSLESLISAIQGDIEEAKK Unmodified 2306.1642 0.16417138 3716 Q969G6 RFK Riboflavin kinase yes yes 0 0 1 By MS/MS 3 0 1 1 101.54 98.063 3 0.0085362 117844 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 29.444 21.91 1068100 0 1068100 0 0 0 0 0 0 0 0 0 0 0 0 0 37206 3716 33194 309736 245210;245211 245211 2 NFDVGHVPIR Unmodified 1152.604 0.60399136 1631 P50579 METAP2 Methionine aminopeptidase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching 10 0 5 1 1 1 1 1 56.865 57.162 3 0.014198 65128 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 46.158 40.123 26432000 0 0 0 0 0 4467300 2497100 0 0 4260900 0 7132500 0 0 8074100 37207 1631 33195 309737;309738;309739;309740;309741 245212 245212 1 NFDVGHVPIRLPR Unmodified 1518.8419 0.84193022 1631 P50579 METAP2 Methionine aminopeptidase 2 yes yes 0 0 1 By matching By matching By MS/MS 10 0 4 1 1 2 74.988 75.176 3;4 0.0008207 86122 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.7 49.985 31430000 0 0 0 0 0 1647600 0 0 0 0 0 0 0 1671000 28111000 37208 1631 33196 309742;309743;309744;309745 245213;245214 245214 2 NFEALNAR Unmodified 933.46683 0.46682918 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.037 38.217 2 0.0064875 42269 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 100.45 86.779 440950000 0 0 0 25637000 26873000 40745000 28800000 43246000 17610000 38043000 55210000 54895000 42981000 29037000 37876000 37209 2451 33197 309746;309747;309748;309749;309750;309751;309752;309753;309754;309755;309756;309757 245215;245216;245217;245218;245219;245220;245221;245222;245223 245220 8 NFEALNSR Unmodified 949.46174 0.4617438 2201 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 33.388 33.567 2 0.0089203 35989 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 84.568 39.876 90932000 0 0 0 11653000 0 9804900 0 0 7177000 14754000 0 16329000 16959000 14255000 0 37210 2201 33198 309758;309759;309760;309761;309762;309763;309764 245224;245225;245226;245227;245228 245228 5 NFEDRERQELGSPEER Unmodified 1989.914 0.91404512 3693 Q92974 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 0 0 2 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 36.749 36.935 3 0.01938 39765 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.249 39.52 173210000 0 0 0 5631300 3977400 12518000 9550000 14529000 0 23481000 18043000 27573000 23320000 8703900 25881000 37211 3693 33199 309765;309766;309767;309768;309769;309770;309771;309772;309773;309774;309775 245229 245229 0 NFEDSSPETLEAHK Unmodified 1602.7162 0.71618016 4919 Q9UI26 IPO11 Importin-11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.1 3.91 4 1 5 2 2 1 1 1 1 1 1 44.841 41.158 2;3 8.0615E-10 45436 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.908 78.341 263060000 36288000 154360000 10848000 0 8495400 28041000 0 0 0 0 25023000 0 0 0 0 37212 4919 33200 309776;309777;309778;309779;309780;309781;309782;309783;309784;309785 245230;245231;245232;245233;245234;245235;245236;245237;245238;245239;245240;245241 245232 12 NFEDVAFDEK Unmodified 1212.5299 0.52988294 838 P07237 P4HB Protein disulfide-isomerase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.77 3.88 8 1 13 2 5 2 1 1 1 1 1 1 1 2 1 1 1 1 62.284 60.62 2 0.0024384 77957 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.99 85.544 4365900000 296840000 3213100000 88483000 37021000 26201000 24143000 28291000 41527000 18838000 38646000 122620000 95055000 30793000 75002000 229320000 37213 838 33201 309786;309787;309788;309789;309790;309791;309792;309793;309794;309795;309796;309797;309798;309799;309800;309801;309802;309803;309804;309805;309806;309807 245242;245243;245244;245245;245246;245247;245248;245249;245250;245251;245252;245253;245254;245255;245256;245257;245258;245259;245260;245261;245262;245263;245264;245265;245266;245267;245268 245247 26 NFESGPRIK Unmodified 1046.5509 0.55089316 3111 Q7Z6E9 RBBP6 E3 ubiquitin-protein ligase RBBP6 yes yes 0 0 1 By MS/MS 2 0 1 1 32.391 26.547 2 0.04497 37267 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.531 56.739 23369000 23369000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37214 3111 33202 309808 245269 245269 0 NFEWVAER Unmodified 1049.493 0.49304393 1135 P22234 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 62.491 62.687 2 0.0082209 70797 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 86.953 46.685 16076000 0 0 0 0 0 0 0 0 0 0 0 0 0 16076000 0 37215 1135 33203 309809;309810;309811;309812 245270;245271;245272;245273 245273 4 NFFDAEDYYIVLELMEGGELFDK Unmodified 2756.2568 0.25675114 715 O96017 CHEK2 Serine/threonine-protein kinase Chk2 yes yes 0 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 2 2 105.02 99.702 2;3 7.1989E-68 124515 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 136.56 133.63 31271000 23745000 7525600 0 0 0 0 0 0 0 0 0 0 0 0 0 37216 715 33204 309813;309814;309815;309816 245274;245275;245276;245277 245277 4 NFFNELSHK Unmodified 1134.5458 0.54580778 2476 Q15021 NCAPD2 Condensin complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 69.652 62.569 2 0.0013138 83415 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 137.9 109.39 42849000 30958000 11891000 0 0 0 0 0 0 0 0 0 0 0 0 0 37217 2476 33205 309817;309818 245278;245279;245280 245280 3 NFFTRYDYEEVEAEGANK Unmodified 2180.9651 0.96507764 1380 P36871 PGM1 Phosphoglucomutase-1 yes yes 0 0 1 By MS/MS 10 0 1 1 72.489 72.858 3 6.1798E-54 83431 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 123.59 118.97 26228000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26228000 37218 1380 33206 309819 245281 245281 1 NFFVNYR Unmodified 958.4661 0.4661009 4971;4820 Q9P2K3;Q9UKL0 RCOR3;RCOR1 REST corepressor 3;REST corepressor 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 62.636 62.729 2 0.02139 72734 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 106.76 89.834 216730000 0 0 0 19779000 0 19656000 18931000 25506000 14158000 29467000 0 0 30659000 26246000 32330000 37219 4820;4971 33207 309820;309821;309822;309823;309824;309825;309826;309827;309828 245282;245283;245284 245284 2 NFGDQPDIR Unmodified 1060.4938 0.49377221 2528 Q15393 SF3B3 Splicing factor 3B subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.223 38.403 2 0.0031099 42280 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 133.86 119.2 661140000 0 0 0 30650000 36007000 34720000 38354000 30741000 29102000 61757000 70159000 89438000 60216000 74565000 105430000 37220 2528 33208 309829;309830;309831;309832;309833;309834;309835;309836;309837;309838;309839;309840 245285;245286;245287;245288;245289;245290;245291;245292;245293;245294;245295;245296 245291 12 NFGEDMDDERLK Oxidation (M) 1483.6249 0.62492232 958 P11940;Q9H361 PABPC1;PABPC3 Polyadenylate-binding protein 1;Polyadenylate-binding protein 3 yes no 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.04 3.41 6 1 21 3 3 1 2 2 2 2 1 2 2 1 2 1 2 2 30.905 30.133 2;3 1.4992E-05 32196 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 90.614 85.535 1040300000 86611000 234760000 22401000 68143000 58513000 72930000 65933000 6938800 58994000 77585000 9516800 106850000 14402000 72839000 83891000 37221 958 33209 309841;309842;309843;309844;309845;309846;309847;309848;309849;309850;309851;309852;309853;309854;309855;309856;309857;309858;309859;309860;309861;309862;309863;309864;309865;309866;309867;309868 245297;245298;245299;245300;245301;245302;245303;245304;245305;245306;245307;245308;245309;245310 245308 1246 10 NFGEDMDDERLK Unmodified 1467.63 0.63000769 958 P11940;Q9H361 PABPC1;PABPC3 Polyadenylate-binding protein 1;Polyadenylate-binding protein 3 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.8 3.53 6 1 18 2 3 2 1 2 2 2 1 1 2 1 2 1 1 2 45.642 44.176 2;3 3.9396E-18 57493 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 226.2 213 1296900000 207980000 392590000 14236000 36241000 43613000 67015000 46845000 46199000 32036000 42710000 48227000 122750000 43081000 36004000 117390000 37222 958 33209 309869;309870;309871;309872;309873;309874;309875;309876;309877;309878;309879;309880;309881;309882;309883;309884;309885;309886;309887;309888;309889;309890;309891;309892;309893 245311;245312;245313;245314;245315;245316;245317;245318;245319;245320;245321;245322;245323;245324;245325;245326;245327;245328;245329;245330;245331;245332;245333;245334;245335;245336;245337;245338;245339 245317 26 NFGEEVDDESLK Unmodified 1380.6045 0.60450445 2268 Q13310 PABPC4 Polyadenylate-binding protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 51.288 50.155 2 9.1915E-07 60569 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 123.79 120.54 1201200000 25098000 471780000 0 39930000 39199000 40870000 44854000 49188000 50505000 56363000 67462000 83222000 66613000 77124000 88960000 37223 2268 33210 309894;309895;309896;309897;309898;309899;309900;309901;309902;309903;309904;309905;309906;309907;309908 245340;245341;245342;245343;245344;245345;245346;245347;245348;245349;245350;245351;245352;245353;245354 245347 15 NFGGHRDYGPR Unmodified 1274.5905 0.59046656 3664 Q92804 TAF15 TATA-binding protein-associated factor 2N yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 2 1 1 1 1 16.246 16.444 3 0.0022761 16880 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 53.569 43.648 197510000 0 0 0 8413300 3163900 15449000 7582800 10972000 9991100 12297000 13771000 43472000 22696000 16795000 32906000 37224 3664 33211 309909;309910;309911;309912;309913;309914;309915;309916;309917;309918;309919;309920;309921 245355;245356;245357;245358;245359;245360;245361 245355 4 NFGGTVSIIPVGEAK Unmodified 1487.7984 0.79839365 2492 Q15058 KIF14 Kinesin-like protein KIF14 yes yes 0 0 0 By MS/MS 2 0 1 1 84.095 79.375 2 0.0011398 98716 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.089 58.376 34613000 0 34613000 0 0 0 0 0 0 0 0 0 0 0 0 0 37225 2492 33212 309922 245362 245362 1 NFGIGQDIQPK Unmodified 1215.6248 0.62478638 1900 P62424 RPL7A 60S ribosomal protein L7a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 59.079 58.731 2 0.00038309 65882 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 103.55 94.13 733120000 0 50795000 0 37545000 33378000 37975000 37697000 43167000 36810000 59826000 65238000 86255000 92530000 62127000 89773000 37226 1900 33213 309923;309924;309925;309926;309927;309928;309929;309930;309931;309932;309933;309934;309935 245363;245364;245365;245366;245367;245368;245369;245370;245371;245372;245373;245374;245375 245371 12 NFGIWLR Unmodified 904.49192 0.49192172 2078 Q02543 RPL18A 60S ribosomal protein L18a yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 80.892 81.023 2 0.033025 93269 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.355 49.045 31833000 0 0 0 0 0 3082500 0 2581800 0 2660200 2282900 4966600 3415400 3561200 9282800 37227 2078 33214 309936;309937;309938;309939;309940;309941;309942;309943 245376;245377 245376 2 NFGSYVTHETK Unmodified 1281.599 0.59896556 1943 P63167;Q96FJ2 DYNLL1;DYNLL2 Dynein light chain 1, cytoplasmic;Dynein light chain 2, cytoplasmic yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 33.951 34.134 2;3 1.4576E-15 36678 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 175.65 166.89 2632200000 0 0 0 123420000 129080000 184530000 135700000 212400000 92795000 201790000 308680000 230490000 361490000 233550000 418230000 37228 1943 33215 309944;309945;309946;309947;309948;309949;309950;309951;309952;309953;309954;309955;309956;309957;309958;309959;309960;309961;309962;309963;309964;309965;309966;309967 245378;245379;245380;245381;245382;245383;245384;245385;245386;245387;245388;245389;245390;245391;245392;245393;245394;245395;245396;245397;245398;245399 245395 16 NFGTENHRENTSR Unmodified 1560.7029 0.70293014 2966 Q6R327 RICTOR Rapamycin-insensitive companion of mTOR yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 6.8721 6.9894 3 0.00065601 4816 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 67.115 64.893 86405000 0 0 0 4273000 5207200 7697100 5585000 6478500 6350700 11735000 14090000 7678000 0 6810600 10500000 37229 2966 33216 309968;309969;309970;309971;309972;309973;309974;309975;309976;309977;309978 245400;245401;245402;245403;245404;245405;245406;245407;245408;245409 245401 10 NFHQYSVEGGK Unmodified 1264.5836 0.58364985 4523 Q9HCY8 S100A14 Protein S100-A14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 2 1 1 1 1 1 1 1 1 1 25.14 24.784 2;3 0.0042919 26351 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 55.776 38.751 147410000 17518000 0 0 59945000 8491600 5898300 5425800 15654000 0 6127100 5223700 12859000 5813300 4453700 0 37230 4523 33217 309979;309980;309981;309982;309983;309984;309985;309986;309987;309988;309989;309990 245410;245411;245412 245411 2 NFIEGDYK Unmodified 984.45526 0.45526144 5139 Q9Y371 SH3GLB1 Endophilin-B1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 42.4 42.55 2 0.014742 47332 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 69.998 51.62 194260000 0 0 0 12422000 13415000 17905000 14081000 28641000 12507000 19629000 25511000 24005000 0 0 26147000 37231 5139 33218 309991;309992;309993;309994;309995;309996;309997;309998;309999;310000 245413;245414;245415;245416 245415 4 NFILAADVMK Unmodified 1120.5951 0.59506616 2179 Q10570 CPSF1 Cleavage and polyadenylation specificity factor subunit 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 85.474 80.187 2 0.017663 102951 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.299 33.458 14082000 10348000 0 3733800 0 0 0 0 0 0 0 0 0 0 0 0 37232 2179 33219 310001;310002 245417;245418 245417 2 NFILAADVMK Oxidation (M) 1136.59 0.58998078 2179 Q10570 CPSF1 Cleavage and polyadenylation specificity factor subunit 1 yes yes 0 1 0 By MS/MS 2 0 1 1 73.198 70.113 2 0.026049 85751 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 58.981 41.585 3452800 0 0 3452800 0 0 0 0 0 0 0 0 0 0 0 0 37233 2179 33219 310003 245419 245419 1 NFILDQCNVYNSGQR Unmodified 1826.837 0.83698078 2645 Q1KMD3 HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 71.141 71.047 2 0.00035871 81913 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 65.574 53.014 39713000 0 0 0 4131100 5208300 14170000 3980000 3722000 8501400 0 0 0 0 0 0 37234 2645 33220 310004;310005;310006;310007;310008;310009 245420;245421;245422 245422 3 NFILDQTNVSAAAQR Unmodified 1646.8376 0.8376327 2046 Q00839 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 25 2 2 2 2 2 3 2 2 2 2 2 2 71.139 71.213 2;3 1.6433E-112 81443 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 199.7 168.2 4747900000 0 0 0 192580000 416870000 315060000 343300000 330080000 171180000 589730000 461850000 611760000 440130000 371810000 503510000 37235 2046 33221 310010;310011;310012;310013;310014;310015;310016;310017;310018;310019;310020;310021;310022;310023;310024;310025;310026;310027;310028;310029;310030;310031;310032;310033;310034 245423;245424;245425;245426;245427;245428;245429;245430;245431;245432;245433;245434;245435;245436;245437;245438;245439;245440;245441;245442;245443;245444;245445;245446;245447;245448;245449;245450;245451;245452;245453 245434 30 NFILDQTNVSAAAQRR Unmodified 1802.9387 0.93874373 2046 Q00839 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.758 64.846 3 1.0662E-06 74221 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 82.102 65.703 464660000 0 0 0 17694000 32892000 32543000 29997000 36205000 29512000 43926000 39165000 61881000 40508000 48487000 51845000 37236 2046 33222 310035;310036;310037;310038;310039;310040;310041;310042;310043;310044;310045;310046 245454;245455;245456;245457;245458;245459;245460;245461;245462;245463;245464;245465;245466;245467;245468;245469 245466 16 NFINNPLAQADWAAK Unmodified 1671.8369 0.83690442 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.61 2.99 4 1 23 2 2 1 2 2 2 2 2 2 2 2 2 2 1 2 84.84 84.226 2;3 8.2986E-59 97306 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 212.89 194.62 2891000000 623810000 457440000 42335000 33306000 135530000 191350000 93548000 169100000 142060000 202110000 166210000 185640000 74477000 87775000 286280000 37237 1356 33223 310047;310048;310049;310050;310051;310052;310053;310054;310055;310056;310057;310058;310059;310060;310061;310062;310063;310064;310065;310066;310067;310068;310069;310070;310071;310072;310073;310074 245470;245471;245472;245473;245474;245475;245476;245477;245478;245479;245480;245481;245482;245483;245484;245485;245486;245487;245488;245489;245490;245491;245492;245493;245494;245495;245496;245497;245498;245499;245500;245501;245502;245503;245504;245505;245506;245507 245486 33 NFIQTEAVVSK Unmodified 1234.6558 0.65575216 126 O00189 AP4M1 AP-4 complex subunit mu-1 yes yes 0 0 0 By matching By MS/MS By matching 10 0 3 1 1 1 55.308 55.556 2 0.012683 62643 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 58.981 37.453 9508300 0 0 0 0 1312700 0 0 0 0 0 0 4156500 0 0 4039100 37238 126 33224 310075;310076;310077 245508 245508 1 NFIQYFHK Unmodified 1095.5502 0.55016488 5084 Q9Y262 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 63 63.351 2 0.0045204 71462 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.36 70.7 44296000 0 0 0 0 0 0 0 0 0 0 4693000 9007800 7160200 9256700 14178000 37239 5084 33225 310078;310079;310080;310081;310082 245509;245510;245511;245512 245509 4 NFITAEELR Unmodified 1091.5611 0.56112349 356 O43707 ACTN4 Alpha-actinin-4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.261 63.348 2 0.0037017 72484 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 101.64 67.847 148130000 0 0 0 6566100 4800500 12985000 7749900 8620000 0 10943000 18888000 21144000 5907900 13645000 36876000 37240 356 33226 310083;310084;310085;310086;310087;310088;310089;310090;310091;310092;310093;310094 245513;245514;245515;245516;245517;245518;245519;245520;245521 245513 9 NFITAEELRR Unmodified 1247.6622 0.66223452 356 O43707 ACTN4 Alpha-actinin-4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.41 2.1 2 25 1 1 2 2 2 2 2 2 2 2 2 2 2 3 53.514 53.142 2;3 0.00057014 58170 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.417 65.249 1297200000 116850000 29623000 0 32506000 16375000 78976000 36909000 24271000 20074000 60856000 105170000 157340000 61520000 72380000 484330000 37241 356 33227 310095;310096;310097;310098;310099;310100;310101;310102;310103;310104;310105;310106;310107;310108;310109;310110;310111;310112;310113;310114;310115;310116;310117;310118;310119;310120;310121 245522;245523;245524;245525;245526;245527;245528;245529;245530;245531;245532;245533;245534;245535;245536;245537;245538;245539;245540;245541;245542;245543 245528 19 NFLEGDWK Unmodified 1007.4712 0.47124585 4592 Q9NR46 SH3GLB2 Endophilin-B2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 68.051 68.128 2 0.03048 78124 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 55.504 13.03 65051000 0 0 0 2641600 2735600 5924300 3432600 7589400 3451800 0 8306600 7476600 8818100 4901400 9772700 37242 4592 33228 310122;310123;310124;310125;310126;310127;310128;310129;310130;310131;310132 245544;245545 245545 2 NFLINYYNR Unmodified 1215.6037 0.60365701 5254 Q9Y5X3 SNX5 Sorting nexin-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 73.663 73.702 2 0.0089221 84965 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 79.116 68.744 40652000 0 0 0 2873400 0 8482000 0 0 0 5208300 0 7840800 0 0 16247000 37243 5254 33229 310133;310134;310135;310136;310137 245546;245547;245548;245549 245547 4 NFMIDTYR Oxidation (M) 1074.4804 0.48043033 3687;3475 Q8TAQ2;Q92922 SMARCC2;SMARCC1 SWI/SNF complex subunit SMARCC2;SWI/SNF complex subunit SMARCC1 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.859 53.002 2 0.0090959 58751 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.501 48.482 473400000 0 0 0 9935600 7707400 53116000 11581000 9843400 23991000 67164000 51426000 69419000 70625000 34995000 63602000 37244 3475;3687 33230 310138;310139;310140;310141;310142;310143;310144;310145;310146;310147;310148;310149 245550;245551;245552;245553;245554;245555;245556;245557;245558 245552 5001 9 NFMIDTYR Unmodified 1058.4855 0.48551571 3687;3475 Q8TAQ2;Q92922 SMARCC2;SMARCC1 SWI/SNF complex subunit SMARCC2;SWI/SNF complex subunit SMARCC1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.369 62.466 2 0.011906 70432 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 75.854 65.44 128330000 0 0 0 5856100 6221900 10367000 6064800 9645600 4081900 13472000 10325000 13856000 9216100 11136000 28083000 37245 3475;3687 33230 310150;310151;310152;310153;310154;310155;310156;310157;310158;310159;310160;310161 245559;245560;245561;245562;245563 245561 5 NFNAVGSVLSK Unmodified 1134.6033 0.60332266 3742 Q96AX1 VPS33A Vacuolar protein sorting-associated protein 33A yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 6.9 3.81 3 1 6 1 2 1 1 1 1 1 1 1 65.612 63.567 2 0.0013617 78102 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 103.7 56.633 111100000 7000500 53730000 5540500 0 0 0 10319000 0 0 6976200 0 8454500 6096000 0 12986000 37246 3742 33231 310162;310163;310164;310165;310166;310167;310168;310169;310170;310171 245564;245565;245566;245567;245568;245569;245570 245567 6 NFNETFLK Unmodified 1011.5025 0.50254598 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 62.093 60.901 2 0.0050366 69184 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 116.88 92.912 6628700000 33384000 484740000 33669000 0 0 20235000 396220000 485160000 331330000 1039200000 1453500000 2305100000 10724000 11054000 24486000 37247 4226 33232 310172;310173;310174;310175;310176;310177;310178;310179;310180;310181;310182;310183;310184;310185 245571;245572;245573;245574;245575;245576;245577;245578;245579;245580;245581;245582;245583;245584;245585;245586;245587;245588;245589;245590;245591;245592;245593;245594;245595;245596;245597 245575 26 NFNETFLKR Unmodified 1167.6037 0.60365701 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 0 1 By MS/MS 10 0 1 1 49.382 50.105 3 0.0013029 56158 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 99.802 86.846 27776000 0 0 0 0 0 0 0 0 0 0 0 27776000 0 0 0 37248 4226 33233 310186 245598 245598 1 NFNIHGTNK Unmodified 1043.5148 0.514842 1024 P15586 GNS N-acetylglucosamine-6-sulfatase yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 23.626 19.654 2 0.00079307 27797 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 128.93 97.643 119850000 111550000 0 8295200 0 0 0 0 0 0 0 0 0 0 0 0 37249 1024 33234 310187;310188 245599 245599 1 NFNNLYGTK Unmodified 1069.5193 0.51925868 2370 Q14134 TRIM29 Tripartite motif-containing protein 29 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 41.58 41.788 2 0.030461 46611 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 48.157 29.779 64079000 0 0 0 0 6444400 0 7647800 0 7357400 0 14152000 0 10133000 0 18345000 37250 2370 33235 310189;310190;310191;310192;310193;310194 245600;245601 245601 2 NFPALLSTGEFLK Unmodified 1435.7711 0.77111627 4824 Q9P2N7;Q9P2J3 KLHL13;KLHL9 Kelch-like protein 13;Kelch-like protein 9 yes no 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 96.121 90.989 2 0.0036864 114248 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.342 62.68 42232000 22212000 19375000 645850 0 0 0 0 0 0 0 0 0 0 0 0 37251 4824 33236 310195;310196;310197 245602;245603 245602 2 NFPNEFAK Unmodified 965.46068 0.46068117 343 O43583 DENR Density-regulated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 53.221 47.28 2 0.023989 59555 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 81.784 67.371 434040000 10234000 411430000 12382000 0 0 0 0 0 0 0 0 0 0 0 0 37252 343 33237 310198;310199;310200 245604 245604 1 NFQLEEEEQNEAK Unmodified 1606.7111 0.71109479 5226 Q9Y5A7 NUB1 NEDD8 ultimate buster 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 46.173 45.51 2 1.1437E-88 57153 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 221.52 200.65 220450000 0 134940000 0 4164500 4254900 7501900 0 4614100 3909100 9679700 10471000 10510000 9151700 5265500 15989000 37253 5226 33238 310201;310202;310203;310204;310205;310206;310207;310208;310209;310210;310211;310212;310213 245605;245606;245607;245608;245609;245610;245611;245612;245613;245614;245615;245616;245617 245607 13 NFQLNQDK Unmodified 1005.488 0.48795855 5080 Q9Y244 POMP Proteasome maturation protein yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 6.8 3.92 2 3 1 1 1 1 1 30.228 28.893 2 0.032623 30762 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 54.205 26.888 109470000 0 77558000 1477600 0 0 0 0 3487700 0 0 0 16807000 10138000 0 0 37254 5080 33239 310214;310215;310216;310217;310218 245618;245619;245620;245621 245621 4 NFQNIFPPSATLHLSNIPPSVSEEDLK Unmodified 2993.5135 0.5134516 1208 P26599 PTBP1 Polypyrimidine tract-binding protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 96.301 88.17 3 8.2518E-79 114126 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 132.84 126.48 49348000 49348000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37255 1208 33240 310219 245622;245623;245624 245624 3 NFQPFALNHQK Unmodified 1342.6782 0.67821894 4446 Q9H871 RMND5A Protein RMD5 homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 2 1 1 1 1 1 1 1 58.158 56.352 2;3 0.00023747 79983 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.282 66.749 58022000 26578000 0 0 3027200 2384200 3301300 0 0 0 4262500 6024000 0 4953800 0 7490300 37256 4446 33241 310220;310221;310222;310223;310224;310225;310226;310227;310228 245625;245626;245627 245627 2 NFQQAVQSALTK Unmodified 1333.699 0.69901396 2333 Q13625 TP53BP2 Apoptosis-stimulating of p53 protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 79.69 71.56 2 1.6829E-09 93962 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 121.9 87.712 12286000 12286000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37257 2333 33242 310229;310230;310231;310232;310233 245628;245629;245630;245631;245632 245630 5 NFRNPLAK Unmodified 958.53485 0.53484916 827 P06733 ENO1 Alpha-enolase yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 37.493 37.75 2 0.017551 40917 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 128.86 78.837 635190000 0 0 0 12446000 0 4638200 5478500 0 3128300 0 101420000 143670000 12389000 73886000 278130000 37258 827 33243 310234;310235;310236;310237;310238;310239;310240;310241;310242 245633 245633 0 NFRPDDPTRK Unmodified 1244.6262 0.62618337 1630 P50570 DNM2 Dynamin-2 yes yes 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 20.397 16.687 3 0.028663 23858 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.744 58.999 238960000 235380000 0 3585600 0 0 0 0 0 0 0 0 0 0 0 0 37259 1630 33244 310243;310244 245634 245634 0 NFRVSDGDWICPDK Unmodified 1707.7675 0.76750423 627 O95218 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 yes yes 0 0 1 By MS/MS 2 0 1 1 76.71 68.579 3 0.00099586 90336 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.168 61.109 48318000 48318000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37260 627 33245 310245 245635 245635 1 NFSDNQLQEGK Unmodified 1278.584 0.58404378 1391 P37802 TAGLN2 Transgelin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 31.274 30.782 2 6.2254E-11 33779 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 179.42 164.56 2984700000 0 166270000 0 102020000 86185000 162610000 203920000 114450000 128740000 218920000 320890000 437340000 171230000 300230000 571930000 37261 1391 33246 310246;310247;310248;310249;310250;310251;310252;310253;310254;310255;310256;310257;310258;310259 245636;245637;245638;245639;245640;245641;245642;245643;245644;245645;245646;245647;245648;245649;245650;245651;245652;245653;245654 245639 19 NFSEVFQK Unmodified 997.4869 0.48689592 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53.838 52.757 2 0.010913 65926 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 111.04 56.249 775650000 98006000 423030000 45396000 9861100 8747800 18991000 14569000 14441000 10190000 29545000 17890000 19924000 18123000 16549000 30392000 37262 5071 33247 310260;310261;310262;310263;310264;310265;310266;310267;310268;310269;310270;310271;310272;310273;310274 245655;245656;245657;245658;245659;245660;245661;245662;245663;245664;245665;245666;245667;245668 245664 13 NFSGPVPDLPEGITVAYTIPK Unmodified 2214.1572 0.15723551 4311 Q9GZZ9 UBA5 Ubiquitin-like modifier-activating enzyme 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5 3.87 5 3 1 2 2 1 1 1 94.735 92.725 2;3 1.6384E-82 114181 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 151.11 135.72 439770000 0 426620000 4280800 0 0 0 0 0 0 4666300 1992200 0 0 0 2212700 37263 4311 33248 310275;310276;310277;310278;310279;310280;310281;310282 245669;245670;245671;245672;245673 245670 4 NFSLLSFGEEAEEEEEEVNRVSQSMK Oxidation (M) 3032.3557 0.35568991 2982 Q6UX04 CWC27 Peptidyl-prolyl cis-trans isomerase CWC27 homolog yes yes 0 1 1 By MS/MS 2 0 1 1 97.32 89.19 3 1.3024E-78 115178 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 137.32 129.74 51987000 51987000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37264 2982 33249 310283 245674 245674 4597 1 NFSLLSFGEEAEEEEEEVNRVSQSMK Unmodified 3016.3608 0.36077529 2982 Q6UX04 CWC27 Peptidyl-prolyl cis-trans isomerase CWC27 homolog yes yes 0 0 1 By MS/MS 2 0 1 1 98.551 90.42 3 0 116626 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 278.26 270.5 70079000 70079000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37265 2982 33249 310284 245675;245676 245675 2 NFSSATEDEIDQCVK Unmodified 1741.7465 0.74649401 1248 P29374 ARID4A AT-rich interactive domain-containing protein 4A yes yes 0 0 0 By MS/MS 2 0 1 1 63.512 57.604 2 0.0019134 73937 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.393 39.421 10267000 0 10267000 0 0 0 0 0 0 0 0 0 0 0 0 0 37266 1248 33250 310285 245677 245677 1 NFSSEIEDLEK Unmodified 1309.6038 0.60377617 3085 Q7Z3K6 MIER3 Mesoderm induction early response protein 3 yes yes 0 0 0 By MS/MS 2 0 1 1 78.341 73.566 2 0.00023151 91709 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.47 90.687 32747000 0 32747000 0 0 0 0 0 0 0 0 0 0 0 0 0 37267 3085 33251 310286 245678 245678 1 NFSSPLPSPAGMLEPLVLDGK Unmodified 2168.1187 0.11874151 2198 Q12851 MAP4K2 Mitogen-activated protein kinase kinase kinase kinase 2 yes yes 0 0 0 By MS/MS 2 0 1 1 99.94 95.227 2 4.9291E-10 117748 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.65 90.089 9522300 0 9522300 0 0 0 0 0 0 0 0 0 0 0 0 0 37268 2198 33252 310287 245679 245679 1 NFSTVDIQK Unmodified 1050.5346 0.53457439 1474 P43246 MSH2 DNA mismatch repair protein Msh2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 44.979 43.665 2 0.00053306 55969 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.72 100.15 1111300000 25203000 599030000 6903100 36944000 0 56427000 40132000 29483000 28838000 51654000 52249000 38488000 41811000 34993000 69111000 37269 1474 33253 310288;310289;310290;310291;310292;310293;310294;310295;310296;310297;310298;310299;310300;310301;310302 245680;245681;245682;245683;245684;245685;245686;245687;245688;245689;245690;245691;245692;245693;245694 245683 14 NFTDTSLMYPEDTCK Oxidation (M) 1836.7546 0.75461586 2550 Q15583 TGIF1 Homeobox protein TGIF1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 62.403 62.499 2 1.6501E-49 71313 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 167.44 161 75471000 0 0 0 3728100 5477800 5080200 5494900 6573200 4397100 7864100 7991100 8295300 6985800 5178700 8404900 37270 2550 33254 310303;310304;310305;310306;310307;310308;310309;310310;310311;310312;310313;310314;310315 245695;245696;245697;245698;245699;245700;245701;245702;245703;245704;245705;245706;245707;245708;245709;245710 245706 4183 16 NFTDTSLMYPEDTCK Unmodified 1820.7597 0.75970124 2550 Q15583 TGIF1 Homeobox protein TGIF1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 71.849 71.534 2 6.0359E-42 88131 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 152.4 134.13 127360000 0 49589000 0 2474800 4475700 6216900 5256100 6572500 3608900 6449000 11795000 7180700 4797000 6465100 12480000 37271 2550 33254 310316;310317;310318;310319;310320;310321;310322;310323;310324;310325;310326;310327;310328 245711;245712;245713;245714;245715;245716;245717;245718;245719;245720;245721;245722;245723;245724 245714 14 NFTEVHPDYGSHIQALLDK Unmodified 2183.0647 0.064732107 768 P04040 CAT Catalase yes yes 0 0 0 By MS/MS 3 0 1 1 80.966 77.666 3 0.015899 93102 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 28.166 18.751 5226000 0 5226000 0 0 0 0 0 0 0 0 0 0 0 0 0 37272 768 33255 310329 245725 245725 1 NFTPPSPFANK Unmodified 1218.6033 0.60332266 4551 Q9NPG3 UBN1 Ubinuclein-1 yes yes 0 0 0 By MS/MS 2 0 2 2 73.263 67.718 2 0.0051335 85650 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.1 58.86 11932000 0 11932000 0 0 0 0 0 0 0 0 0 0 0 0 0 37273 4551 33256 310330;310331 245726;245727 245726 2 NFTQSSNLIVHK Unmodified 1386.7256 0.72556306 195 O14628 ZNF195 Zinc finger protein 195 yes no 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 52.59 46.578 3 0.0011956 64021 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.262 50.723 33678000 30423000 0 3254800 0 0 0 0 0 0 0 0 0 0 0 0 37274 195 33257 310332;310333 245728;245729 245728 2 NFTTEQVTAMLLSK Unmodified 1581.8072 0.80724378 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 88.844 88.972 2 0.00068532 102830 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.439 48.185 4427000 0 0 0 0 0 0 0 0 0 1215000 0 0 0 0 3212000 37275 1337 33258 310334;310335 245730 245730 1 NFVDIGIVTSIEINHK Unmodified 1797.9625 0.96249887 437 O60841 EIF5B Eukaryotic translation initiation factor 5B yes yes 0 0 0 By MS/MS 2 0 1 1 94.517 86.386 3 0.034077 111854 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 27.125 16.929 5892000 5892000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37276 437 33259 310336 245731 245731 1 NFVDPVTK Unmodified 918.48108 0.48108226 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.232 42.409 2 0.012862 47443 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 73.665 59.679 516660000 0 0 0 83062000 29803000 28721000 34555000 70965000 22340000 32435000 39955000 55184000 62857000 25079000 31703000 37277 1029 33260 310337;310338;310339;310340;310341;310342;310343;310344;310345;310346;310347;310348 245732;245733;245734;245735;245736 245735 5 NFVDSPIIVDITK Unmodified 1459.7922 0.79224564 770 P04062 GBA Glucosylceramidase yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 88.224 87.871 2 0.003335 102132 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 54.259 35.82 2135300 0 0 0 2135300 0 0 0 0 0 0 0 0 0 0 0 37278 770 33261 310349;310350 245737;245738 245738 2 NFVLDNTDRK Unmodified 1220.6149 0.61494998 3313 Q8N1G2 CMTR1 Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 35.558 35.714 3 0.021283 39910 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 43.77 25.697 53103000 0 0 0 4141500 4629500 6183400 3986300 0 2312200 0 0 5163200 7063300 6957100 12667000 37279 3313 33262 310351;310352;310353;310354;310355;310356;310357;310358;310359 245739;245740;245741 245740 3 NFVSQELK Unmodified 963.50255 0.50254598 4358 Q9H267 VPS33B Vacuolar protein sorting-associated protein 33B yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching 10 0 7 1 1 1 1 1 1 1 45.952 46.047 2 0.047391 51873 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 47.849 30.885 37564000 0 0 0 3192500 3061100 4671500 4306500 0 3569100 0 0 8383200 0 0 10380000 37280 4358 33263 310360;310361;310362;310363;310364;310365;310366 245742 245742 1 NFVSQIVAENLHPK Unmodified 1594.8467 0.84674083 201 O14657 TOR1B Torsin-1B yes yes 0 0 0 By MS/MS 2 0 1 1 90.235 82.104 3 0.0050275 106700 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.298 44.203 5132800 5132800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37281 201 33264 310367 245743 245743 1 NFVVVMVTK Oxidation (M) 1051.5736 0.57360243 1745;1746 P54725;P54727 RAD23A;RAD23B UV excision repair protein RAD23 homolog A;UV excision repair protein RAD23 homolog B no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.53 3 2 11 2 1 2 1 1 1 1 1 1 1 1 1 1 1 62.113 60.822 2 0.0035813 68759 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 77.732 58.096 284780000 113410000 15793000 48625000 3112300 2917200 3387700 5740700 3464200 3068300 6574800 11478000 20755000 0 12487000 33963000 37282 1745;1746 33265 310368;310369;310370;310371;310372;310373;310374;310375;310376;310377;310378;310379;310380;310381;310382;310383 245744;245745;245746;245747;245748;245749;245750;245751;245752;245753;245754;245755;245756;245757;245758;245759;245760 245758 2836 17 NFVVVMVTK Unmodified 1035.5787 0.57868781 1745;1746 P54725;P54727 RAD23A;RAD23B UV excision repair protein RAD23 homolog A;UV excision repair protein RAD23 homolog B no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 74.88 74.217 2 0.020004 85605 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 53.493 38.958 132660000 41488000 0 0 0 0 2465100 0 3200600 3603700 4770100 9965900 12439000 2246500 10488000 41994000 37283 1745;1746 33265 310384;310385;310386;310387;310388;310389;310390;310391;310392;310393 245761;245762;245763;245764;245765;245766;245767;245768 245766 8 NFWQGVK Unmodified 877.44464 0.44463717 3518 Q8TEQ6 GEMIN5 Gem-associated protein 5 yes yes 0 0 0 By MS/MS 10 0 1 1 52.257 52.934 2 0.027199 59075 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.72 9.6864 17091000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17091000 37284 3518 33266 310394 245769 245769 1 NFWVSGLSSTTR Unmodified 1353.6677 0.66771383 2532 Q15424 SAFB Scaffold attachment factor B1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.091 76.153 2 6.5463E-05 87291 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.679 71.072 72023000 0 0 0 2738500 3187300 4274900 3672100 5092900 4180100 5650800 7766000 9136400 3907700 5218300 17198000 37285 2532 33267 310395;310396;310397;310398;310399;310400;310401;310402;310403;310404;310405;310406 245770;245771;245772;245773;245774;245775;245776;245777;245778;245779;245780;245781 245773 12 NFYESDDDQK Unmodified 1259.4942 0.49422572 128 O00203 AP3B1 AP-3 complex subunit beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.662 22.868 2 0.0025569 22749 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 85.731 83.051 59371000 0 0 0 2017100 2387200 4592400 3458300 3213900 2510700 5669000 5335100 10399000 5540200 7094800 7153100 37286 128 33268 310407;310408;310409;310410;310411;310412;310413;310414;310415;310416;310417;310418 245782;245783;245784;245785;245786;245787;245788;245789;245790 245787 9 NFYFNYK Unmodified 994.45487 0.45486751 5262;488 Q9Y618;O75376 NCOR2;NCOR1 Nuclear receptor corepressor 2;Nuclear receptor corepressor 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.025 64.116 2 0.023392 73034 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 87.582 38.27 121040000 0 0 0 4970000 5292700 8729600 8141900 7276500 11427000 10014000 11488000 11941000 10459000 11149000 20149000 37287 5262;488 33269 310419;310420;310421;310422;310423;310424;310425;310426;310427;310428;310429;310430 245791;245792;245793;245794;245795;245796;245797;245798;245799 245798 9 NFYQEHPDLAR Unmodified 1388.6473 0.64731274 1062 P17844 DDX5 Probable ATP-dependent RNA helicase DDX5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 3 2 2 2 2 2 2 1 2 2 2 43.67 43.791 2;3 1.9825E-05 49635 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 129.38 115.18 992350000 0 0 0 52214000 42900000 85393000 70390000 68458000 59263000 100020000 92786000 72770000 110360000 83847000 153960000 37288 1062 33270 310431;310432;310433;310434;310435;310436;310437;310438;310439;310440;310441;310442;310443;310444;310445;310446;310447;310448;310449;310450;310451;310452;310453;310454 245800;245801;245802;245803;245804;245805;245806;245807;245808;245809;245810;245811;245812;245813;245814;245815;245816 245814 11 NFYQEHPDLARR Unmodified 1544.7484 0.74842377 1062 P17844 DDX5 Probable ATP-dependent RNA helicase DDX5 yes yes 0 0 1 By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 20 2 2 2 2 2 1 2 2 1 1 1 2 37.64 37.78 3;4 0.00083128 41895 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 76.655 72.089 534610000 0 0 0 23105000 12791000 56452000 54754000 54057000 30745000 38343000 38910000 29515000 73974000 36880000 85088000 37289 1062 33271 310455;310456;310457;310458;310459;310460;310461;310462;310463;310464;310465;310466;310467;310468;310469;310470;310471;310472;310473;310474 245817;245818;245819;245820;245821;245822 245818 3 NFYVEHPEVAR Unmodified 1359.6571 0.65714914 3670 Q92841 DDX17 Probable ATP-dependent RNA helicase DDX17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 2 2 2 1 2 2 2 2 2 2 2 46.258 46.459 2;3 0.00057196 52315 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 66.262 58.538 1122600000 0 0 0 38839000 51651000 67256000 73920000 50251000 98172000 115130000 112990000 115720000 152790000 99975000 145950000 37290 3670 33272 310475;310476;310477;310478;310479;310480;310481;310482;310483;310484;310485;310486;310487;310488;310489;310490;310491;310492;310493;310494;310495;310496 245823;245824;245825;245826;245827;245828;245829;245830;245831;245832;245833;245834;245835;245836;245837;245838;245839;245840;245841 245836 16 NFYVEVPELAK Unmodified 1307.6762 0.67615325 3041 Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.39 3.7 5 1 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 83.216 82.225 2 0.00047061 95585 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 84.213 72.166 1205200000 15402000 272340000 8770100 20296000 45043000 58855000 48088000 58502000 66804000 91546000 70598000 101210000 88476000 103690000 155560000 37291 3041 33273 310497;310498;310499;310500;310501;310502;310503;310504;310505;310506;310507;310508;310509;310510;310511;310512;310513;310514 245842;245843;245844;245845;245846;245847;245848;245849;245850;245851;245852;245853;245854;245855;245856;245857;245858;245859;245860 245859 19 NFYYAAVPSAR Unmodified 1257.6142 0.6142217 2177 Q10471 GALNT2 Polypeptide N-acetylgalactosaminyltransferase 2;Polypeptide N-acetylgalactosaminyltransferase 2 soluble form yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 63.009 63.161 2 0.0058116 71759 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 72.607 59.229 18649000 0 0 0 0 0 0 0 0 7107800 11542000 0 0 0 0 0 37292 2177 33274 310515;310516;310517;310518;310519;310520;310521 245861;245862;245863;245864;245865;245866;245867 245864 6 NGAAQPLDQPQEESEEQPVFR Unmodified 2368.0931 0.093131702 3820 Q96ER3 SAAL1 Protein SAAL1 yes yes 0 0 0 By MS/MS 10 0 1 1 62.613 63.185 3 3.1243E-19 71519 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.016 71.969 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37293 3820 33275 310522 245868 245868 1 NGADQPFATDQSK Unmodified 1377.6161 0.61607219 4222 Q9BXB4 OSBPL11 Oxysterol-binding protein-related protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 27.1 27.355 2 0.0010066 28350 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.56 57.697 39592000 0 0 0 2749600 2801200 0 0 0 0 4520100 5346000 7726100 5042900 3981900 7423900 37294 4222 33276 310523;310524;310525;310526;310527;310528;310529;310530;310531;310532 245869;245870;245871;245872;245873;245874;245875;245876;245877 245871 9 NGALSVLQK Unmodified 928.53418 0.53418046 2179 Q10570 CPSF1 Cleavage and polyadenylation specificity factor subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.24 2 1 10 1 2 1 1 1 1 1 1 1 1 1 1 47.616 46.355 2 0.0063105 61460 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.14 68.435 152500000 34366000 49935000 0 5264500 0 4870500 6089000 8125200 0 6050200 7931500 7847900 7826700 6364700 7831700 37295 2179 33277 310533;310534;310535;310536;310537;310538;310539;310540;310541;310542;310543;310544;310545 245878;245879;245880;245881;245882;245883;245884;245885;245886;245887 245880 10 NGDFLPTR Unmodified 918.45593 0.45593014 1752 P55036 PSMD4 26S proteasome non-ATPase regulatory subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.239 43.414 2 0.0067028 48952 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 98.629 78.843 494910000 0 0 0 33241000 34881000 44079000 13668000 11165000 9674800 71432000 84548000 118550000 16350000 17214000 40102000 37296 1752 33278 310546;310547;310548;310549;310550;310551;310552;310553;310554;310555;310556;310557 245888;245889;245890;245891;245892;245893;245894;245895;245896;245897;245898 245889 10 NGDGLPSAVAQR Unmodified 1183.5945 0.59454889 2756 Q5SRE5 NUP188 Nucleoporin NUP188 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 39.138 39.306 2 0.022085 43653 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 39.657 29.67 45582000 0 0 0 0 0 6118200 5948600 7290900 3936600 6622800 0 0 7567300 8097900 0 37297 2756 33279 310558;310559;310560;310561;310562;310563;310564 245899;245900;245901;245902 245900 4 NGDILTLK Unmodified 872.49673 0.49673232 809 P05413 FABP3 Fatty acid-binding protein, heart yes yes 0 0 0 By MS/MS 2 0 1 1 58.636 52.805 2 0.03306 68128 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.665 35.531 44208000 0 44208000 0 0 0 0 0 0 0 0 0 0 0 0 0 37298 809 33280 310565 245903 245903 1 NGDLDEVK Unmodified 888.41888 0.41887593 1803 P58546 MTPN Myotrophin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 17.415 17.624 2 0.042717 16388 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.498 60.974 137420000 0 0 0 3961400 4847500 0 6960200 5549300 0 7822200 20196000 22999000 6897200 19085000 39102000 37299 1803 33281 310566;310567;310568;310569;310570;310571;310572;310573;310574;310575 245904 245904 0 NGDVCISILHEPGEDK Unmodified 1781.8254 0.82541304 1880 P62253 UBE2G1 Ubiquitin-conjugating enzyme E2 G1;Ubiquitin-conjugating enzyme E2 G1, N-terminally processed yes yes 0 0 0 By MS/MS 2 0 1 1 73.936 65.74 3 0.00061001 87042 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.489 49.855 15350000 15350000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37300 1880 33282 310576 245905 245905 1 NGDVIELK Unmodified 886.476 0.47599688 2122 Q06124 PTPN11 Tyrosine-protein phosphatase non-receptor type 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 41.469 41.638 2 0.033332 46233 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 53.775 23.106 46258000 0 0 0 3165400 3466000 5243800 3694700 0 2893400 5821000 5216300 4856800 4855700 0 7045100 37301 2122 33283 310577;310578;310579;310580;310581;310582;310583;310584;310585;310586 245906;245907 245906 2 NGEELHGGK Unmodified 939.44101 0.44100836 3961 Q96QK1 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 1.5819 -1.7383 2 0.00076164 1064 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.06 102.91 59569000 0 59569000 0 0 0 0 0 0 0 0 0 0 0 0 0 37302 3961 33284 310587;310588 245908;245909;245910;245911;245912;245913;245914 245911 7 NGEENIIDNPYLRPVK Unmodified 1869.9585 0.95847612 3121 Q7Z7C8 TAF8 Transcription initiation factor TFIID subunit 8 yes yes 0 0 1 By MS/MS By matching By matching By MS/MS 10 0 4 1 1 1 1 74.042 74.252 3 0.023762 85577 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 29.341 24.339 19111000 0 0 0 0 0 0 0 0 0 5686600 0 3837900 0 3178600 6407500 37303 3121 33285 310589;310590;310591;310592 245915 245915 1 NGEEPLPSEEEHCSVVEVTEEEVK Unmodified 2754.2178 0.21779945 3352 Q8N5S9 CAMKK1 Calcium/calmodulin-dependent protein kinase kinase 1 yes yes 0 0 0 By MS/MS 3 0 1 1 74.216 70.544 3 0.0013714 85010 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 31.176 27.977 3397000 0 3397000 0 0 0 0 0 0 0 0 0 0 0 0 0 37304 3352 33286 310593 245916 245916 1 NGEILAPPESLCGGK Unmodified 1540.7555 0.75554256 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching 8.67 2.98 1 5 1 1 1 1 1 1 67.714 66.927 2 0.037854 76616 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 38.875 21.849 25229000 0 15628000 0 0 0 1669300 1115200 0 2083300 0 1495100 3238500 0 0 0 37305 3443 33287 310594;310595;310596;310597;310598;310599 245917;245918 245918 2 NGEILLSPALSYTTK Unmodified 1605.8614 0.86138784 3143 Q86U86 PBRM1 Protein polybromo-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 82.211 81.563 2 3.8797E-14 93625 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 99.011 74.667 218450000 0 137660000 1858000 3129300 4625000 6188100 4061500 6340300 3553900 9035900 7496800 8487400 7879700 8049300 10091000 37306 3143 33288 310600;310601;310602;310603;310604;310605;310606;310607;310608;310609;310610;310611;310612;310613;310614 245919;245920;245921;245922;245923;245924;245925;245926;245927;245928;245929;245930;245931;245932;245933;245934 245930 16 NGELENIK Unmodified 915.46616 0.46616048 1965 P68402 PAFAH1B2 Platelet-activating factor acetylhydrolase IB subunit beta yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 28.497 24.77 2 0.014574 32704 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.531 51.723 697240000 0 694430000 2809300 0 0 0 0 0 0 0 0 0 0 0 0 37307 1965 33289 310615;310616 245935;245936 245936 2 NGELENIKPK Unmodified 1140.6139 0.61388734 1965 P68402 PAFAH1B2 Platelet-activating factor acetylhydrolase IB subunit beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 1 3 2 32.793 28.382 2;3 0.0042386 37541 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.42 91.389 324870000 9347800 305490000 10033000 0 0 0 0 0 0 0 0 0 0 0 0 37308 1965 33290 310617;310618;310619;310620;310621;310622 245937;245938;245939;245940;245941 245937 5 NGEPEPTPVVNGEK Unmodified 1465.7049 0.7048872 1409 P40222 TXLNA Alpha-taxilin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 33.814 34.06 2 9.9997E-12 37016 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 101.3 78.151 80160000 0 0 0 0 6582900 6400900 6409600 0 3559200 6774200 11797000 12848000 6098400 7569900 12120000 37309 1409 33291 310623;310624;310625;310626;310627;310628;310629;310630;310631;310632 245942;245943;245944;245945;245946;245947;245948;245949;245950;245951;245952;245953 245948 12 NGERPSHEVQIIK Unmodified 1505.795 0.79503961 393 O60306 AQR Intron-binding protein aquarius yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 28.769 28.015 3 0.010809 28731 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 37.594 17.213 94851000 37617000 0 2397800 0 3401600 6619000 6042700 0 0 0 7493100 7731800 8389400 8607300 6551700 37310 393 33292 310633;310634;310635;310636;310637;310638;310639;310640;310641;310642 245954;245955;245956 245956 2 NGESSELDLQGIR Unmodified 1416.6845 0.68448611 5095 Q9Y2B0 CNPY2 Protein canopy homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 59.804 60.217 2 4.047E-05 67860 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 104.52 86.659 34883000 0 0 0 0 0 0 0 0 0 0 4608500 7742500 0 6575300 15957000 37311 5095 33293 310643;310644;310645;310646 245957;245958;245959;245960 245959 4 NGETAEQLQK Unmodified 1116.5411 0.54111633 4969 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 13.532 13.72 2 0.0029838 12139 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 78.149 56.602 33663000 0 0 0 0 1881100 2405400 2320500 1960600 2153700 3968200 3491900 2476400 5517200 3182700 4305200 37312 4969 33294 310647;310648;310649;310650;310651;310652;310653;310654;310655;310656;310657 245961;245962;245963;245964;245965;245966;245967;245968;245969;245970;245971;245972 245969 12 NGETELCMEGR Oxidation (M) 1310.5231 0.52309978 661 O95433 AHSA1 Activator of 90 kDa heat shock protein ATPase homolog 1 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.17 3.18 1 2 9 1 2 1 1 1 1 1 1 1 1 1 22.295 21.362 2 0.00033796 26062 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.83 103.05 159960000 124060 74794000 0 6250000 4492800 16063000 10647000 0 5965800 12329000 8347600 8797000 0 0 12152000 37313 661 33295 310658;310659;310660;310661;310662;310663;310664;310665;310666;310667;310668;310669 245973;245974;245975;245976;245977;245978;245979;245980;245981 245976 800 9 NGETELCMEGR Unmodified 1294.5282 0.52818516 661 O95433 AHSA1 Activator of 90 kDa heat shock protein ATPase homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35.22 34.549 2 1.8332E-05 38438 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 132.78 123.57 429310000 4864000 190650000 0 8503400 5881100 23331000 14971000 12178000 6748500 31756000 29124000 24240000 14420000 17561000 45087000 37314 661 33295 310670;310671;310672;310673;310674;310675;310676;310677;310678;310679;310680;310681;310682;310683 245982;245983;245984;245985;245986;245987;245988;245989;245990;245991;245992;245993;245994 245982 13 NGETVPIDEQFDK Unmodified 1490.6889 0.68890278 1328 P33176 KIF5B Kinesin-1 heavy chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 57.931 57.996 2 0.00048251 66205 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 106 91.796 224000000 0 0 0 25812000 20517000 27421000 0 20514000 19603000 0 39881000 0 24460000 18755000 27035000 37315 1328 33296 310684;310685;310686;310687;310688;310689;310690;310691;310692 245995;245996;245997;245998;245999;246000;246001;246002;246003;246004;246005;246006 246004 10 NGEVQNLAVK Unmodified 1070.572 0.57202253 3170 Q86VP6;O75155 CAND1;CAND2 Cullin-associated NEDD8-dissociated protein 1;Cullin-associated NEDD8-dissociated protein 2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.67 2.87 3 2 1 1 3 1 1 35.516 31.702 2 0.0019369 40992 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.46 74.818 908390000 907140 852200000 3598700 0 0 51686000 0 0 0 0 0 0 0 0 0 37316 3170 33297 310693;310694;310695;310696;310697;310698 246007;246008;246009;246010;246011;246012;246013;246014;246015 246011 9 NGEVVHTPETSV Unmodified 1267.6044 0.60444487 285 O15427 SLC16A3 Monocarboxylate transporter 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 39.821 40.125 2 0.0025469 44679 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 62.823 40.737 45624000 0 0 0 0 3890800 0 0 3668800 0 6113300 5434800 6596100 5715600 6350600 7853500 37317 285 33298 310699;310700;310701;310702;310703;310704;310705;310706;310707 246016;246017;246018;246019;246020;246021 246017 6 NGFDFVIDENAPVTER Unmodified 1821.8533 0.85334235 1739 P54278 PMS2 Mismatch repair endonuclease PMS2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 83.158 83.303 2 0.00030209 96257 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 85.845 76.656 22837000 0 0 0 0 0 4136100 1984100 2752900 3800900 6161600 0 0 0 0 4001100 37318 1739 33299 310708;310709;310710;310711;310712;310713 246022;246023;246024;246025 246024 4 NGFDFVIDENAPVTERAK Unmodified 2020.9854 0.98541915 1739 P54278 PMS2 Mismatch repair endonuclease PMS2 yes yes 0 0 1 By MS/MS 2 0 1 1 81.267 78.739 3 0.0030131 95536 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 40.798 30.459 4640700 0 0 4640700 0 0 0 0 0 0 0 0 0 0 0 0 37319 1739 33300 310714 246026 246026 1 NGFEQFCINFVNEK Unmodified 1744.7879 0.78790532 2215 Q12965 MYO1E Unconventional myosin-Ie no no 0 0 0 By MS/MS 2 0 1 1 90.386 85.49 2 0.010105 106240 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.451 67.311 22976000 0 22976000 0 0 0 0 0 0 0 0 0 0 0 0 0 37320 2215 33301 310715 246027 246027 1 NGFLLDGFPR Unmodified 1134.5822 0.58219329 1748 P54819 AK2 Adenylate kinase 2, mitochondrial;Adenylate kinase 2, mitochondrial, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 84.837 84.271 2 0.0040734 97557 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 74.173 59.022 185520000 4520900 0 0 6565900 5484000 17939000 16137000 15170000 14376000 20445000 18583000 17120000 8017200 12120000 29044000 37321 1748 33302 310716;310717;310718;310719;310720;310721;310722;310723;310724;310725;310726;310727;310728 246028;246029;246030;246031;246032;246033;246034;246035;246036;246037;246038;246039;246040 246030 13 NGFSSVQATQLQTTQSVEGATGSAVK Unmodified 2595.2776 0.27763801 2380 Q14157 UBAP2L Ubiquitin-associated protein 2-like yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS 8.72 2.86 2 1 15 3 1 1 1 1 1 2 3 1 1 1 1 1 72.148 71.414 2;3 0 81852 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 309.81 293.67 591880000 0 279480000 0 2936700 6138700 9176400 6390300 5805100 93830000 131270000 11989000 11887000 7156300 7054700 18758000 37322 2380 33303 310729;310730;310731;310732;310733;310734;310735;310736;310737;310738;310739;310740;310741;310742;310743;310744;310745;310746 246041;246042;246043;246044;246045;246046;246047 246044 7 NGFVVLK Unmodified 775.45922 0.4592246 1949 P63241;Q6IS14;Q9GZV4 EIF5A;EIF5AL1;EIF5A2 Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-1-like;Eukaryotic translation initiation factor 5A-2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.6 3.67 3 7 1 1 1 1 1 1 1 1 1 1 55.125 53.577 2 0.040686 59629 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 68.485 43.403 14679000000 6820400000 3938400000 1306000000 0 0 160460000 0 0 0 192040000 420320000 374840000 145310000 324860000 996650000 37323 1949 33304 310747;310748;310749;310750;310751;310752;310753;310754;310755;310756 246048;246049;246050;246051;246052;246053;246054 246054 7 NGGIYEGVFK Unmodified 1082.5397 0.53965977 4047 Q99700 ATXN2 Ataxin-2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 60.623 60.805 2 0.0038686 69047 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 74.92 58.447 28033000 0 0 0 0 1075000 2608000 0 2010500 1488000 2320500 3133100 3891900 3304900 2694900 5505700 37324 4047 33305 310757;310758;310759;310760;310761;310762;310763;310764;310765;310766 246055;246056;246057;246058 246058 4 NGGLGHMNIALLSDLTK Unmodified 1752.9193 0.91925384 1265 P30048 PRDX3 Thioredoxin-dependent peroxide reductase, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 95.224 90.359 3 0.0002617 112048 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.385 45.552 22321000 0 22321000 0 0 0 0 0 0 0 0 0 0 0 0 0 37325 1265 33306 310767 246059 246059 1 NGGLGHMNIALLSDLTK Oxidation (M) 1768.9142 0.91416847 1265 P30048 PRDX3 Thioredoxin-dependent peroxide reductase, mitochondrial yes yes 0 1 0 By MS/MS 2 0 1 1 87.265 79.134 3 9.0394E-05 102992 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.41 60.071 21662000 21662000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37326 1265 33306 310768 246060;246061 246060 1864 2 NGGQILIADLR Unmodified 1168.6564 0.65642086 1769 P55735 SEC13 Protein SEC13 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.187 74.248 2 5.8917E-11 85650 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 153.97 112.94 314630000 0 0 0 16076000 16741000 21852000 18126000 28245000 17291000 31430000 33296000 35311000 22324000 25230000 48704000 37327 1769 33307 310769;310770;310771;310772;310773;310774;310775;310776;310777;310778;310779;310780 246062;246063;246064;246065;246066;246067;246068;246069;246070;246071;246072;246073 246062 12 NGHFFPEQVLNK Unmodified 1428.715 0.71499837 4024 Q99570 PIK3R4 Phosphoinositide 3-kinase regulatory subunit 4 yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS 10 0 5 1 1 1 1 1 64.025 64.069 3 0.0067356 72360 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.27 28.219 17784000 0 0 0 1287800 0 3901200 0 2933300 0 0 0 0 0 2551100 7110600 37328 4024 33308 310781;310782;310783;310784;310785 246074;246075 246075 2 NGHVGISFVPK Unmodified 1153.6244 0.62439245 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.144 51.296 3 3.9875E-05 57587 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 94.465 87.418 661770000 0 0 0 29065000 22946000 52296000 42312000 37739000 32677000 59356000 67831000 78930000 43611000 64004000 131010000 37329 1124 33309 310786;310787;310788;310789;310790;310791;310792;310793;310794;310795;310796;310797 246076;246077;246078;246079;246080;246081;246082;246083;246084;246085;246086;246087;246088;246089;246090;246091;246092;246093;246094;246095;246096 246086 21 NGHVPSDPALFK Unmodified 1280.6513 0.65133548 2925 Q6P1X5 TAF2 Transcription initiation factor TFIID subunit 2 yes yes 0 0 0 By MS/MS 2 0 1 1 58.906 50.701 3 0.0040375 68979 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 59.57 49.882 21954000 21954000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37330 2925 33310 310798 246097 246097 0 NGHYIIPQMADSLDLSELAK Unmodified 2214.0991 0.099068703 5126 Q9Y2X7 GIT1 ARF GTPase-activating protein GIT1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 95.172 88.674 3 6.0118E-07 112410 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.496 53.227 16473000 6525500 9947200 0 0 0 0 0 0 0 0 0 0 0 0 0 37331 5126 33311 310799;310800 246098;246099 246099 2 NGIAFMGPPSQAMWALGDK Unmodified 1989.9441 0.94408839 2231 Q13085 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes yes 0 0 0 By MS/MS 2 0 1 1 96.773 88.643 2 1.3858E-05 114497 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.3 88.167 8141500 8141500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37332 2231 33312 310801 246100 246100 1 NGIAGSSLPPPPIK Unmodified 1346.7558 0.75580056 5227 Q9Y5A9 YTHDF2 YTH domain-containing family protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 68.935 68.475 2 0.00016935 78055 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 81.865 55.351 156060000 0 58634000 0 0 4986900 6740900 0 7661000 8262500 18017000 0 12019000 0 12543000 27200000 37333 5227 33313 310802;310803;310804;310805;310806;310807;310808;310809;310810 246101;246102;246103;246104;246105;246106;246107;246108;246109;246110;246111;246112;246113;246114;246115;246116 246110 15 NGIHDLDNISFPK Unmodified 1468.731 0.73104237 1589 P49721 PSMB2 Proteasome subunit beta type-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.38 3.73 1 5 2 16 3 3 2 1 1 1 1 1 1 1 2 2 1 2 2 75.771 74.797 2;3 2.5304E-66 89608 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 221.6 202.24 2867000000 218660000 1778900000 528480000 9858500 6914600 14014000 6512700 10372000 9219500 11322000 37689000 47964000 8572100 32232000 146310000 37334 1589 33314 310811;310812;310813;310814;310815;310816;310817;310818;310819;310820;310821;310822;310823;310824;310825;310826;310827;310828;310829;310830;310831;310832;310833;310834 246117;246118;246119;246120;246121;246122;246123;246124;246125;246126;246127;246128;246129;246130;246131;246132;246133;246134 246130 14 NGIPLELR Unmodified 910.52362 0.52361577 903 P0CG30;P0CG29 GSTT2B;GSTT2 Glutathione S-transferase theta-2B;Glutathione S-transferase theta-2 yes no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 64.617 64.89 2 0.010501 73374 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.451 67.095 19120000 0 0 0 0 0 0 1772700 0 0 2028700 4623500 0 0 4017000 6678600 37335 903 33315 310835;310836;310837;310838;310839 246135;246136 246135 2 NGIPLELRTVDLVK Unmodified 1565.9141 0.91409211 903 P0CG30;P0CG29 GSTT2B;GSTT2 Glutathione S-transferase theta-2B;Glutathione S-transferase theta-2 yes no 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 88.604 82.118 3 0.00073938 103991 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.438 65.009 194710000 106930000 87776000 0 0 0 0 0 0 0 0 0 0 0 0 0 37336 903 33316 310840;310841 246137;246138 246137 2 NGISPTNPTK Unmodified 1027.5298 0.52982336 4938;2826 Q9UJF2;Q5VWQ8 RASAL2;DAB2IP Ras GTPase-activating protein nGAP;Disabled homolog 2-interacting protein no no 0 0 0 By MS/MS 10 0 1 1 20.53 20.692 2 0.010493 21288 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 55.908 24.835 5886500 0 0 0 0 0 0 0 0 0 5886500 0 0 0 0 0 37337 4938;2826 33317 310842 246139;246140;246141 246139 3 NGITEENLNK Unmodified 1130.5568 0.5567664 1857 P61764 STXBP1 Syntaxin-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 26.568 26.396 2 0.00065942 32714 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.71 93.864 187360000 0 136220000 0 0 1882200 9419000 4887500 0 2498400 5356000 5627700 6643900 3273800 3391500 8158600 37338 1857 33318 310843;310844;310845;310846;310847;310848;310849;310850;310851;310852;310853 246142;246143;246144;246145;246146;246147;246148;246149;246150 246144 9 NGKPISSSYVK Unmodified 1178.6295 0.62953741 1063 P17858 PFKL ATP-dependent 6-phosphofructokinase, liver type yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 20.229 20.322 3 0.020578 20910 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 30.004 4.445 46065000 0 0 0 2212500 4629500 0 0 6984200 0 6895200 0 0 15224000 10120000 0 37339 1063 33319 310854;310855;310856;310857;310858;310859 246151 246151 1 NGKPITSEDIK Unmodified 1200.635 0.63501672 861 P08237 PFKM ATP-dependent 6-phosphofructokinase, muscle type yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.58 3.57 4 2 13 1 4 1 1 1 1 1 1 1 1 2 1 1 2 17.143 16.713 2;3 0.0047289 20401 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 46.955 30.013 8855400000 628260 6420500000 350950 34064000 38831000 25302000 36166000 49892000 22000000 0 49395000 902850000 41423000 37548000 1196500000 37340 861 33320 310860;310861;310862;310863;310864;310865;310866;310867;310868;310869;310870;310871;310872;310873;310874;310875;310876;310877;310878 246152;246153;246154;246155;246156;246157;246158;246159;246160;246161;246162;246163;246164 246164 7 NGLAEGTEQEEEEEDEQVR Unmodified 2189.9196 0.91964359 2448 Q147X3 NAA30 N-alpha-acetyltransferase 30 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 2 2 2 2 2 41.477 41.599 2;3 1.3744E-64 45979 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 206.32 190.93 233820000 0 0 0 4722200 12063000 12744000 0 0 0 41986000 58673000 103630000 0 0 0 37341 2448 33321 310879;310880;310881;310882;310883;310884;310885;310886;310887;310888;310889 246165;246166;246167;246168;246169;246170;246171 246168 7 NGLENPEGGAHK Unmodified 1221.5738 0.57381344 1536 P48382 RFX5 DNA-binding protein RFX5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.68 1.57 1 24 1 2 2 2 2 2 2 2 2 2 2 2 2 13.742 13.763 2;3 0.00051035 13032 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 78.556 57.585 485880000 0 9145500 0 25334000 30316000 25318000 27540000 37361000 27001000 36640000 38946000 64309000 60092000 44734000 59147000 37342 1536 33322 310890;310891;310892;310893;310894;310895;310896;310897;310898;310899;310900;310901;310902;310903;310904;310905;310906;310907;310908;310909;310910;310911;310912;310913;310914 246172;246173;246174;246175;246176;246177;246178;246179;246180;246181;246182;246183;246184;246185;246186 246181 6 NGLGAPVR Unmodified 782.43989 0.43988615 2425 Q14671 PUM1 Pumilio homolog 1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 24.274 24.713 2 0.03623 25068 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.018 33.063 35561000 0 0 0 0 0 0 0 5139700 0 0 0 9044700 8119800 5163400 8093900 37343 2425 33323 310915;310916;310917;310918;310919 246187 246187 1 NGLLDMNK Unmodified 903.4484 0.44840192 326 O43414 ERI3 ERI1 exoribonuclease 3 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 52.243 45.338 2 0.027595 59115 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.324 53.692 70446000 3359600 67087000 0 0 0 0 0 0 0 0 0 0 0 0 0 37344 326 33324 310920;310921 246188 246188 1 NGLLFTYGVTGSGK Unmodified 1412.73 0.72997974 2072 Q02241 KIF23 Kinesin-like protein KIF23 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 78.381 78.476 2 1.161E-12 90705 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 107.06 68.488 48323000 0 0 0 0 2942400 2923200 5742900 0 3426800 5227400 6185700 7650500 4533800 0 9690700 37345 2072 33325 310922;310923;310924;310925;310926;310927;310928;310929;310930 246189;246190;246191;246192;246193;246194;246195;246196;246197 246190 9 NGLLTEHNICEINGQNVIGLK Unmodified 2335.1954 0.1954287 168 O00560 SDCBP Syntenin-1 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 79.915 80.078 3 1.1517E-07 92253 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.168 59.459 10642000 0 0 0 0 0 0 0 0 0 4160400 0 0 0 0 6481800 37346 168 33326 310931;310932 246198 246198 1 NGLLVLPK Unmodified 852.54329 0.54328858 4219 Q9BX63 BRIP1 Fanconi anemia group J protein yes yes 0 0 0 By MS/MS 2 0 1 1 76.997 72.16 2 0.028278 90022 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.741 57.186 17752000 0 17752000 0 0 0 0 0 0 0 0 0 0 0 0 0 37347 4219 33327 310933 246199 246199 1 NGLNSTEGEAR Unmodified 1146.5265 0.5265289 5225 Q9Y597 KCTD3 BTB/POZ domain-containing protein KCTD3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 12.772 12.982 2 0.0040546 12190 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 73.985 64.771 30302000 0 0 0 0 1684500 2971200 0 0 0 4415400 3400300 4691400 5658400 3466200 4014500 37348 5225 33328 310934;310935;310936;310937;310938;310939;310940;310941;310942 246200;246201;246202;246203;246204;246205;246206;246207 246200 8 NGLPAPDFK Unmodified 957.49198 0.4919813 3101 Q7Z4S6 KIF21A Kinesin-like protein KIF21A yes yes 0 0 0 By MS/MS 2 0 1 1 59.993 54.135 2 0.040393 69331 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.589 49.761 61835000 0 61835000 0 0 0 0 0 0 0 0 0 0 0 0 0 37349 3101 33329 310943 246208 246208 1 NGLPDHTDPEDNEIVCFLK Unmodified 2212.0106 0.010647626 2463 Q14C86 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 82.516 82.667 3 5.7774E-05 95394 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.764 57.27 11330000 0 0 0 0 0 0 0 0 0 3014800 0 0 0 0 8314800 37350 2463 33330 310944;310945 246209 246209 1 NGLPVDITK Unmodified 955.53385 0.53384611 2921 Q6P1N0 CC2D1A Coiled-coil and C2 domain-containing protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 55.81 55.996 2 0.05023 62480 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.075 29.247 46891000 0 0 0 3840400 0 3732900 3837400 0 3009200 5384200 4402200 6166400 5308300 3691900 7518300 37351 2921 33331 310946;310947;310948;310949;310950;310951;310952;310953;310954;310955 246210 246210 1 NGLTFPFICK Unmodified 1195.606 0.6059652 2319 Q13572 ITPK1 Inositol-tetrakisphosphate 1-kinase yes yes 0 0 0 By MS/MS 2 0 1 1 92.57 84.439 2 0.016267 109394 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.494 47.857 7614700 7614700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37352 2319 33332 310956 246211 246211 1 NGMAVAQFLESNPWVEK Unmodified 1918.9247 0.92473315 1325 P32929 CTH Cystathionine gamma-lyase yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 97.776 91.325 2 4.3379E-117 115650 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 260.28 247.78 85725000 46342000 39383000 0 0 0 0 0 0 0 0 0 0 0 0 0 37353 1325 33333 310957;310958 246212;246213 246213 2 NGMAVAQFLESNPWVEK Oxidation (M) 1934.9196 0.91964777 1325 P32929 CTH Cystathionine gamma-lyase yes yes 0 1 0 By MS/MS 2 0 1 1 93.941 85.81 2 1.5436E-35 111207 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 131.79 118.81 21070000 21070000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37354 1325 33333 310959 246214 246214 1973 1 NGMTLLMMGSADALPEEPSAK 2 Oxidation (M) 2193.9956 0.99559119 1741 P54578 USP14 Ubiquitin carboxyl-terminal hydrolase 14 yes yes 0 2 0 By MS/MS By MS/MS 2.33 0.471 6 3 7 2 80.376 76.589 2;3 0 96289 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 301.48 280.64 310350000 0 304860000 5493700 0 0 0 0 0 0 0 0 0 0 0 0 37355 1741 33334 310960;310961;310962;310963;310964;310965;310966;310967;310968 246215;246216;246217;246218;246219;246220 246217 2827;2828;2829 5 NGMTLLMMGSADALPEEPSAK Oxidation (M) 2178.0007 0.000676566 1741 P54578 USP14 Ubiquitin carboxyl-terminal hydrolase 14 yes yes 0 1 0 By MS/MS By matching 2.2 0.4 4 1 4 1 86.741 82.723 2 3.2192E-262 101338 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 253.46 232.8 287410000 0 285920000 1493700 0 0 0 0 0 0 0 0 0 0 0 0 37356 1741 33334 310969;310970;310971;310972;310973 246221;246222;246223;246224 246221 2827;2828;2829 4 NGMTLLMMGSADALPEEPSAK Unmodified 2162.0058 0.0057619439 1741 P54578 USP14 Ubiquitin carboxyl-terminal hydrolase 14 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 91.94 88.411 2;3 5.3038E-199 110107 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 298.1 289.11 321130000 0 318520000 2606300 0 0 0 0 0 0 0 0 0 0 0 0 37357 1741 33334 310974;310975;310976 246225;246226;246227;246228 246227 4 NGMTLLMMGSADALPEEPSAK 3 Oxidation (M) 2209.9905 0.99050581 1741 P54578 USP14 Ubiquitin carboxyl-terminal hydrolase 14 yes yes 0 3 0 By MS/MS 3 0 1 1 72.379 67.852 3 2.2781E-09 82723 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 83.065 76.545 23727000 0 23727000 0 0 0 0 0 0 0 0 0 0 0 0 0 37358 1741 33334 310977 246229 246229 2827;2828;2829 1 NGMVEDWDSFQAILDHTYK Oxidation (M) 2284.0106 0.010647626 716 O96019 ACTL6A Actin-like protein 6A yes yes 0 1 0 By MS/MS 2 0 1 1 96.148 91.327 3 0.00028304 113170 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 54.511 49.301 13544000 0 13544000 0 0 0 0 0 0 0 0 0 0 0 0 0 37359 716 33335 310978 246230 246230 857 1 NGMVEDWDSFQAILDHTYK Unmodified 2268.0157 0.015733004 716 O96019 ACTL6A Actin-like protein 6A yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 98.03 92.649 3 0.0015184 116127 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.164 37.954 74094000 45006000 29088000 0 0 0 0 0 0 0 0 0 0 0 0 0 37360 716 33335 310979;310980;310981 246231;246232 246232 2 NGNGGPGPYVGQAGTATLPR Unmodified 1882.9286 0.92857298 426 O60716 CTNND1 Catenin delta-1 yes yes 0 0 0 By MS/MS 10 0 1 1 59.235 59.437 2 3.8012E-07 67996 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 58.487 42.947 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37361 426 33336 310982 246233 246233 1 NGNLPEFGDAISTASK Unmodified 1619.7791 0.77911477 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 73.115 72.422 2 1.1298E-07 83435 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 111.79 96.527 1487400000 0 1048000000 4298700 19592000 21272000 63698000 28541000 22210000 17891000 47103000 42231000 50346000 27295000 34491000 60365000 37362 5187 33337 310983;310984;310985;310986;310987;310988;310989;310990;310991;310992;310993;310994;310995;310996;310997;310998 246234;246235;246236;246237;246238;246239;246240;246241;246242;246243;246244;246245;246246;246247;246248;246249;246250 246235 17 NGNQLRSPQEEALQR Unmodified 1738.8711 0.8710581 3693 Q92974 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 8 1 1 1 1 1 1 1 1 34.247 34.467 3 0.007921 37863 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 36.638 23.466 31420000 0 0 0 0 1793600 0 3819000 5007700 0 2639000 7475100 0 2748000 2776200 5161100 37363 3693 33338 310999;311000;311001;311002;311003;311004;311005;311006 246251;246252;246253 246251 3 NGNTPLHIAAR Unmodified 1162.6207 0.62070406 251 O15084 ANKRD28 Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching 10 0 6 1 1 1 1 1 1 31.959 32.168 3 0.043262 34048 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 24.853 17.453 17859000 0 0 0 0 3403100 0 3210300 0 1677600 0 3443400 0 0 3194300 2930400 37364 251 33339 311007;311008;311009;311010;311011;311012 246254 246254 1 NGNVCTNNISMYELLK Unmodified 1868.8761 0.8760684 3017 Q6ZUT9 DENND5B DENN domain-containing protein 5B yes yes 0 0 0 By MS/MS 2 0 1 1 87.166 82.357 2 4.7887E-07 102419 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.75 89.065 11529000 0 11529000 0 0 0 0 0 0 0 0 0 0 0 0 0 37365 3017 33340 311013 246255 246255 1 NGPALQEAYVR Unmodified 1216.62 0.62003536 4940 Q9UJU6 DBNL Drebrin-like protein yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 47.563 47.674 2 0.0012176 53699 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 74.267 62.498 177460000 0 0 0 10007000 7321600 9580200 9906900 11105000 6657900 22901000 24009000 41052000 17030000 17885000 0 37366 4940 33341 311014;311015;311016;311017;311018;311019;311020;311021;311022;311023;311024 246256;246257;246258;246259;246260;246261;246262 246259 1 NGPEFEAR Unmodified 918.41954 0.41954463 2539 Q15459 SF3A1 Splicing factor 3A subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.79 23.995 2 0.0068171 25340 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 95.531 95.531 711370000 0 0 0 34209000 35262000 36581000 46753000 37041000 30324000 58380000 85233000 86034000 65247000 71565000 124740000 37367 2539 33342 311025;311026;311027;311028;311029;311030;311031;311032;311033;311034;311035;311036 246263;246264;246265;246266;246267;246268;246269;246270;246271 246268 7 NGPFKPNYYRY Unmodified 1417.6779 0.67788459 377;3868 O43865;Q96HN2 AHCYL1;AHCYL2 Putative adenosylhomocysteinase 2;Putative adenosylhomocysteinase 3 no no 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 48.918 49.062 3 0.040541 55137 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 60.434 57.146 145910000 0 0 0 8257200 6855200 0 16278000 11088000 6433300 20986000 20246000 29113000 0 0 26650000 37368 377;3868 33343 311037;311038;311039;311040;311041;311042;311043;311044;311045 246272 246272 1 NGPGFHNDIDSNSTIQEILIPASK Unmodified 2566.2663 0.26634504 3873 Q96I24 FUBP3 Far upstream element-binding protein 3 yes yes 0 0 0 By MS/MS 10 0 1 1 83.547 83.737 3 2.4253E-09 96609 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.418 54.928 11877000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11877000 37369 3873 33344 311046 246273;246274 246273 2 NGPHSNSSGVLPLGLQPAPGLSK Unmodified 2226.1757 0.17567954 2928 Q6P2H3 CEP85 Centrosomal protein of 85 kDa yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 77.453 77.614 3 0.0010705 89703 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 31.75 25.936 60453000 0 0 0 0 0 0 0 5852600 5739000 10958000 8374400 0 5942900 9979300 13607000 37370 2928 33345 311047;311048;311049;311050;311051;311052;311053 246275;246276;246277;246278;246279;246280 246277 5 NGPLPIPSEGSGFTK Unmodified 1499.762 0.76200815 2828 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 74.524 73.976 2 5.9997E-23 84711 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 115.57 96.303 11312000 0 0 0 11312000 0 0 0 0 0 0 0 0 0 0 0 37371 2828 33346 311054;311055;311056;311057;311058;311059;311060;311061 246281;246282;246283;246284;246285;246286;246287;246288 246283 8 NGPPSVEDLQILTK Unmodified 1509.8039 0.80387296 4915 Q9UHY8 FEZ2 Fasciculation and elongation protein zeta-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 81.798 81.315 2 2.9322E-06 100713 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.17 80.316 87348000 0 62345000 0 0 0 3176900 1652700 3468300 1793500 6901000 0 3532700 0 4478100 0 37372 4915 33347 311062;311063;311064;311065;311066;311067;311068;311069 246289;246290;246291;246292 246291 4 NGPSFQTAFGK Unmodified 1152.5564 0.55637247 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 58.124 56.552 2 7.816E-05 63273 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 111.61 100.1 160030000 10950000 16989000 0 13551000 19939000 0 22220000 17958000 12959000 20088000 0 0 0 0 25375000 37373 3023 33348 311070;311071;311072;311073;311074;311075;311076;311077;311078 246293;246294;246295;246296;246297;246298;246299;246300;246301;246302;246303;246304 246296 12 NGPSTLESSRFPARK Unmodified 1645.8536 0.85361712 564 O75943 RAD17 Cell cycle checkpoint protein RAD17 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 32.884 33.075 4 0.021229 36318 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 31.827 25.923 54452000 0 0 0 0 3572700 4979900 3198200 5079600 4779300 6560200 8970200 5776700 7145300 4389800 0 37374 564 33349 311079;311080;311081;311082;311083;311084;311085;311086;311087;311088 246305 246305 1 NGQDLGVAFK Unmodified 1047.5349 0.53490874 2046 Q00839 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.65 2.94 3 1 19 1 2 1 3 1 2 2 1 2 1 1 2 2 2 50.712 49.832 1;2 7.6765E-272 56815 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 259.58 164.92 13620000000 94736000 3431500000 21628000 708510000 0 25342000 651990000 778420000 573630000 1097100000 1232200000 1697600000 1122100000 850780000 1334300000 37375 2046 33350 311089;311090;311091;311092;311093;311094;311095;311096;311097;311098;311099;311100;311101;311102;311103;311104;311105;311106;311107;311108;311109;311110;311111 246306;246307;246308;246309;246310;246311;246312;246313;246314;246315;246316;246317;246318;246319;246320;246321;246322;246323;246324;246325;246326;246327 246306 22 NGQESGLEIGTDTIQFGAPASNGNENEVVPVLSEK Unmodified 3599.7227 0.72272869 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 0 By MS/MS 3 0 1 1 91.773 88.553 3 0.0025232 106085 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 24.919 20.11 2919400 0 2919400 0 0 0 0 0 0 0 0 0 0 0 0 0 37376 5216 33351 311112 246328 246328 1 NGQEVAVLEASSSEDMGR Oxidation (M) 1893.8374 0.83743429 3339 Q8N556 AFAP1 Actin filament-associated protein 1 yes yes 0 1 0 By matching By matching By matching By matching By MS/MS By matching By matching 10 0 7 1 1 1 1 1 1 1 52.524 52.555 2 3.9372E-20 58690 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 102.62 87.081 21368000 0 0 0 1326200 2182700 0 2434700 0 0 3653800 0 5820100 3260100 2690500 0 37377 3339 33352 311113;311114;311115;311116;311117;311118;311119 246329 246329 4928 1 NGQGWVPSNYITPVNSLEK Unmodified 2102.0433 0.043268383 1462;731 P00519;P42684 ABL1;ABL2 Tyrosine-protein kinase ABL1;Abelson tyrosine-protein kinase 2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 83.582 82.957 2 1.0062E-23 102385 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.01 96.482 41576000 0 16336000 0 0 4094100 4528300 2636100 3886000 4409500 5685900 0 0 0 0 0 37378 731;1462 33353 311120;311121;311122;311123;311124;311125;311126 246330;246331;246332;246333 246332 4 NGQHFIIPQMADSSLDLSELAK Unmodified 2413.1948 0.19476 2382 Q14161 GIT2 ARF GTPase-activating protein GIT2 yes yes 0 0 0 By MS/MS 2 0 1 1 95.687 87.557 3 0.042573 113219 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 39.086 30.266 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37379 2382 33354 311127 246334 246334 1 NGQHVASSPIPVVISQSEIGDASR Unmodified 2447.2405 0.24046464 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.474 77.531 3 6.7591E-29 89226 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 99.064 91.618 891830000 0 0 0 16219000 41533000 75157000 38781000 50897000 36704000 94772000 104720000 105700000 47954000 74992000 204410000 37380 1124 33355 311128;311129;311130;311131;311132;311133;311134;311135;311136;311137;311138;311139 246335;246336;246337 246335 0 NGQHVASSPIPVVISQSEIGDASRVR Unmodified 2702.41 0.40998959 1124 P21333 FLNA Filamin-A yes yes 0 0 1 By MS/MS 2 0 1 1 83.29 75.16 4 0.0073084 98331 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 29.47 27.637 7352900 7352900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37381 1124 33356 311140 246338 246338 1 NGQIHRDVK Unmodified 1065.5679 0.56794021 684 O95747 OXSR1 Serine/threonine-protein kinase OSR1 yes yes 0 0 1 By MS/MS 2 0 1 1 6.0448 2.6126 2 0.0067401 5547 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 140.11 114.55 46651000 46651000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37382 684 33357 311141 246339 246339 1 NGQIQYSIGGPNPGRK Unmodified 1684.8645 0.86451616 3391 Q8NBF2 NHLRC2 NHL repeat-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 43.02 41.997 3 7.2336E-17 57883 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 118.52 108.74 76956000 41045000 0 0 0 0 4652300 0 0 0 5685200 6445300 0 0 5171200 13957000 37383 3391 33358 311142;311143;311144;311145;311146;311147 246340;246341;246342;246343;246344 246343 5 NGQLAASVETAGDSELFLMK Oxidation (M) 2096.0096 0.0095849934 2626 Q16658 FSCN1 Fascin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.29 0.452 10 4 5 7 2 85.281 80.666 2;3 6.7814E-112 100532 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 188.63 156.57 972540000 218910000 652190000 101450000 0 0 0 0 0 0 0 0 0 0 0 0 37384 2626 33359 311148;311149;311150;311151;311152;311153;311154;311155;311156;311157;311158;311159;311160;311161 246345;246346;246347;246348;246349;246350;246351;246352;246353;246354;246355;246356;246357;246358;246359;246360 246346 4280 14 NGQLAASVETAGDSELFLMK Unmodified 2080.0147 0.014670371 2626 Q16658 FSCN1 Fascin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 8 2 3 6 1 92.059 87.053 2;3 1.9875E-82 113027 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 176.32 133.77 774720000 123240000 613970000 37508000 0 0 0 0 0 0 0 0 0 0 0 0 37385 2626 33359 311162;311163;311164;311165;311166;311167;311168;311169;311170;311171 246361;246362;246363;246364;246365;246366;246367;246368;246369;246370;246371 246365 11 NGQTEDVATGPR Unmodified 1243.5793 0.57929275 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.39 16.57 2 0.00025852 16164 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 96.89 85.725 78765000 0 0 0 4016900 4130900 5473800 4342300 5216200 4285500 6304500 7906200 11455000 5810300 7353800 12469000 37386 3443 33360 311172;311173;311174;311175;311176;311177;311178;311179;311180;311181;311182;311183 246372;246373;246374;246375;246376;246377;246378;246379;246380 246377 9 NGQTREHALLAYTLGVK Unmodified 1870.0061 0.006095016 1960 P68104;Q5VTE0;Q05639 EEF1A1;EEF1A1P5;EEF1A2 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 2 yes no 0 0 1 By MS/MS 3 0 2 2 75.675 72.119 3;4 0.00019754 86919 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 84.035 74.114 22466000 0 22466000 0 0 0 0 0 0 0 0 0 0 0 0 0 37387 1960 33361 311184;311185 246381;246382;246383;246384 246384 4 NGQVIEPDK Unmodified 998.50327 0.50327426 3243 Q8IWR0 ZC3H7A Zinc finger CCCH domain-containing protein 7A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 17.607 17.784 2 0.026405 16323 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 49.833 36.058 26686000 0 0 0 0 3890100 2855000 4040300 0 0 4115700 3663400 0 0 3443600 4677600 37388 3243 33362 311186;311187;311188;311189;311190;311191;311192 246385;246386;246387 246387 3 NGQVVEPDK Unmodified 984.48762 0.4876242 4888 Q9UGR2 ZC3H7B Zinc finger CCCH domain-containing protein 7B yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.506 12.655 2 0.021812 11881 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 51.949 39.756 25726000 0 0 0 933230 1809900 1969600 2180900 1712900 1701400 2607800 2694700 3255400 2347800 1869400 2643500 37389 4888 33363 311193;311194;311195;311196;311197;311198;311199;311200;311201;311202;311203;311204 246388;246389;246390;246391 246388 4 NGRVEIIANDQGNR Unmodified 1554.7863 0.78626584 932 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 29.767 29.959 2;3 2.7509E-06 32170 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 90.759 68.438 1436100000 0 0 0 86295000 57110000 70915000 77846000 72211000 74538000 89474000 133730000 166480000 184550000 167550000 255420000 37390 932 33364 311205;311206;311207;311208;311209;311210;311211;311212;311213;311214;311215;311216;311217;311218;311219;311220;311221;311222;311223;311224;311225;311226;311227;311228 246392;246393;246394;246395;246396;246397;246398;246399;246400;246401;246402;246403;246404;246405;246406;246407;246408;246409;246410 246402 17 NGSCGVSYIAQEPGNYEVSIK Unmodified 2271.0478 0.047761414 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 77.76 73.633 2 4.5905E-199 91581 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 316.46 280.79 199350000 0 199350000 0 0 0 0 0 0 0 0 0 0 0 0 0 37391 487 33365 311229;311230 246411 246411 1 NGSEADIDEGLYSR Unmodified 1524.6692 0.66922997 1137 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 49.826 49.198 2 6.3063E-117 54917 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 205.46 194.94 533330000 0 150400000 0 12359000 8813900 27785000 18700000 12627000 17547000 28328000 53408000 45862000 21611000 36770000 99116000 37392 1137 33366 311231;311232;311233;311234;311235;311236;311237;311238;311239;311240;311241;311242;311243;311244 246412;246413;246414;246415;246416;246417;246418;246419;246420;246421;246422;246423;246424;246425;246426 246421 15 NGSEADIDEGLYSRQLYVLGHEAMK Unmodified 2794.3232 0.32320799 1137 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 1 By MS/MS 2 0 1 1 88.442 80.311 4 5.9601E-56 104485 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 124.14 117.58 78343000 78343000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37393 1137 33367 311245 246427;246428 246428 2 NGSEELVEK Unmodified 1003.4822 0.48220447 4322 Q9H0C8 ILKAP Integrin-linked kinase-associated serine/threonine phosphatase 2C yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 18.414 17.776 2 0.033862 21553 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.42 27.66 22659000 0 15005000 0 0 0 1771500 1711900 0 1636600 0 0 0 0 2533200 0 37394 4322 33368 311246;311247;311248;311249;311250;311251 246429;246430;246431 246429 2 NGSEGNITTR Unmodified 1047.4945 0.49450049 1406 P39880 CUX1 Homeobox protein cut-like 1 yes yes 0 0 0 By MS/MS 10 0 1 1 8.5014 8.8603 2 0.01238 6981 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 52.579 32.058 2199000 0 0 0 0 0 0 0 0 0 0 2199000 0 0 0 0 37395 1406 33369 311252 246432 246432 1 NGSFANLR Unmodified 877.44061 0.44061443 1701 P52788 SMS Spermine synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 33.098 33.503 2 0.0050119 35628 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 134.06 90.99 101850000 0 0 0 0 0 0 2643300 0 0 4918000 21980000 14596000 0 14250000 43464000 37396 1701 33370 311253;311254;311255;311256;311257;311258 246433;246434;246435;246436 246436 4 NGSLDSPGKQDTEEDEEEDEK Unmodified 2349.9568 0.95681696 5087 Q9Y266 NUDC Nuclear migration protein nudC yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.8 4 1 8 2 3 1 1 1 1 1 1 1 1 23.143 21.583 2;3 1.8409E-102 27323 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 209.66 206.35 354740000 39684000 167040000 0 0 0 21146000 0 0 14283000 26689000 26851000 0 0 26586000 32464000 37397 5087 33371 311259;311260;311261;311262;311263;311264;311265;311266;311267;311268;311269;311270;311271 246437;246438;246439;246440;246441;246442;246443;246444;246445;246446;246447;246448;246449;246450;246451 246440 14 NGSLDSPGKQDTEEDEEEDEKDK Unmodified 2593.0787 0.078723009 5087 Q9Y266 NUDC Nuclear migration protein nudC yes yes 0 0 2 By MS/MS 2 0 1 1 23.472 18.496 3 0.020272 26569 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 37.56 35.247 6480900 6480900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37398 5087 33372 311272 246452 246452 0 NGSLICTASK Unmodified 1049.5175 0.51754412 5008 Q9ULV4 CORO1C Coronin-1C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 26.923 27.038 2 0.0084283 29460 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 60.064 43.861 36474000 0 0 0 0 5443400 3817700 0 0 0 6725300 13259000 0 0 7228600 0 37399 5008 33373 311273;311274;311275;311276;311277 246453;246454;246455;246456;246457 246457 5 NGSLTNHFSFEK Unmodified 1379.647 0.64697839 1134 P22102 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.07 3.94 6 1 7 2 3 2 1 1 1 1 1 1 1 55.099 52.261 2;3 0.00067551 56408 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.628 27.571 1980300000 1349100000 383220000 78582000 10463000 0 29140000 18894000 11438000 0 0 22458000 0 0 25662000 51366000 37400 1134 33374 311278;311279;311280;311281;311282;311283;311284;311285;311286;311287;311288;311289;311290;311291 246458;246459;246460;246461;246462;246463;246464;246465;246466;246467;246468;246469;246470;246471 246461 13 NGSQIDAVLDK Unmodified 1158.5881 0.58806652 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By matching By matching By MS/MS By matching 10 0 4 1 1 1 1 35.03 34.858 3 0.018308 38269 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 30.889 18.314 6655000 0 0 0 2030100 1616400 0 1810700 0 1197700 0 0 0 0 0 0 37401 3023 33375 311292;311293;311294;311295 246472 246472 1 NGSVVAMTGDGVNDAVALK Unmodified 1816.8989 0.89891233 2027 P98194 ATP2C1 Calcium-transporting ATPase type 2C member 1 yes yes 0 0 0 By MS/MS 2 0 1 1 77.119 72.282 2 2.9746E-40 90307 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.95 114.67 24597000 0 24597000 0 0 0 0 0 0 0 0 0 0 0 0 0 37402 2027 33376 311296 246473 246473 1 NGTEDLPYAMKPIDYYTETK Oxidation (M) 2364.0831 0.083143867 2569 Q15738 NSDHL Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 71.605 71.543 3 8.8654E-12 82220 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 82.609 78.503 42457000 0 0 0 6573900 6451000 6813700 0 0 3478400 0 0 13869000 0 5271200 0 37403 2569 33377 311297;311298;311299;311300;311301;311302 246474;246475 246475 4223 2 NGTGGLFQGK Unmodified 977.49304 0.49304393 5009 Q9ULW0 TPX2 Targeting protein for Xklp2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 33.605 33.266 2 0.0066775 45855 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.279 59.259 85516000 13120000 0 0 3947600 4106700 5098800 4575000 4792100 5034400 5715500 6823000 9451600 5842300 5931300 11078000 37404 5009 33378 311303;311304;311305;311306;311307;311308;311309;311310;311311;311312;311313;311314;311315 246476;246477;246478;246479 246479 4 NGTIELMEPLDEEISGIVEVVGRVTAK Unmodified 2897.5056 0.50558903 1346 P35244 RPA3 Replication protein A 14 kDa subunit yes yes 0 0 1 By MS/MS By MS/MS 1.5 0.5 1 1 1 1 107.45 107.7 3 5.8105E-09 96013 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 66.447 59.724 12318000 9218500 3099500 0 0 0 0 0 0 0 0 0 0 0 0 0 37405 1346 33379 311316;311317 246480;246481 246481 2 NGTLTFGDVDTSDEK Unmodified 1597.7108 0.71076044 2958 Q6PJG2 ELMSAN1 ELM2 and SANT domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 58.291 58.366 2 0.0014726 65639 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.65 55.646 25140000 0 0 0 4234100 2969300 0 5211500 0 0 0 3913000 3303000 0 0 5509600 37406 2958 33380 311318;311319;311320;311321;311322;311323 246482;246483;246484;246485 246483 4 NGTQVHGTITGVDVSMNTHLK Oxidation (M) 2224.0906 0.090629281 1893 P62314 SNRPD1 Small nuclear ribonucleoprotein Sm D1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 2 2 1 54.658 48.957 3;4 9.4E-55 67124 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 120.32 107.69 616020000 445760000 76673000 93584000 0 0 0 0 0 0 0 0 0 0 0 0 37407 1893 33381 311324;311325;311326;311327;311328 246486;246487;246488;246489;246490;246491 246489 3064 5 NGTQVHGTITGVDVSMNTHLK Unmodified 2208.0957 0.095714659 1893 P62314 SNRPD1 Small nuclear ribonucleoprotein Sm D1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 7 4 1 2 68.664 61.895 3;4 1.9295E-18 81753 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.95 89.359 693920000 677270000 0 16658000 0 0 0 0 0 0 0 0 0 0 0 0 37408 1893 33381 311329;311330;311331;311332;311333;311334;311335 246492;246493;246494;246495;246496;246497 246493 6 NGTTTACYFATIHTDSSLLLADITDK Unmodified 2828.3538 0.35383942 5118 Q9Y2T3 GDA Guanine deaminase yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 2 2 2 2 97.794 92.872 3 2.2103E-05 116106 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.62 48.971 80027000 37043000 42984000 0 0 0 0 0 0 0 0 0 0 0 0 0 37409 5118 33382 311336;311337;311338;311339 246498;246499;246500 246500 3 NGTTYEGIFK Unmodified 1128.5451 0.54513908 3576 Q8WWM7 ATXN2L Ataxin-2-like protein yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 55.733 55.689 2 0.022012 63299 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 46.334 30.953 49248000 0 0 0 4031500 5174900 4758900 6390400 7854500 5945600 7995500 0 0 0 7096500 0 37410 3576 33383 311340;311341;311342;311343;311344;311345;311346;311347 246501;246502 246501 2 NGVCSLEFDRK Unmodified 1323.6241 0.62413446 3929 Q96MX6 WDR92 WD repeat-containing protein 92 yes yes 0 0 1 By MS/MS 2 0 1 1 46.894 43.042 3 0.022561 54433 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 48.948 37.736 7365200 0 0 7365200 0 0 0 0 0 0 0 0 0 0 0 0 37411 3929 33384 311348 246503 246503 1 NGVDLGPICGPPNGII Unmodified 1591.8028 0.8028271 2425 Q14671 PUM1 Pumilio homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 91.764 91.871 2 0.0031301 106654 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 45.653 29.079 29959000 0 0 0 0 2125200 1577700 1775500 3214400 2223200 3190700 3575100 3827600 2643300 2773300 3033100 37412 2425 33385 311349;311350;311351;311352;311353;311354;311355;311356;311357;311358;311359 246504;246505;246506 246505 3 NGVDLLMK Oxidation (M) 904.4688 0.46880301 289;4080 O15511;Q9BPX5 ARPC5;ARPC5L Actin-related protein 2/3 complex subunit 5;Actin-related protein 2/3 complex subunit 5-like protein no no 0 1 0 By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 45.429 45.014 1;2 0.0091355 57894 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 139.97 53.458 149890000 0 14957000 0 11586000 9745100 12937000 13744000 0 7232300 14163000 16398000 0 13406000 10270000 25448000 37413 289;4080 33386 311360;311361;311362;311363;311364;311365;311366;311367;311368;311369;311370;311371 246507;246508;246509;246510;246511;246512;246513 246508 372 7 NGVDLLMK Unmodified 888.47389 0.47388839 289;4080 O15511;Q9BPX5 ARPC5;ARPC5L Actin-related protein 2/3 complex subunit 5;Actin-related protein 2/3 complex subunit 5-like protein no no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 60.073 58.965 2 0.034963 66127 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.786 32.939 588840000 0 524360000 4896400 0 0 0 0 0 0 0 11752000 11545000 6632000 7088200 22559000 37414 289;4080 33386 311372;311373;311374;311375;311376;311377;311378 246514;246515 246515 2 NGVELTSLRQK Unmodified 1243.6884 0.68844927 2689 Q4V328 GRIPAP1 GRIP1-associated protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 46.668 39.19 2 0.0028383 54383 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.97 76.353 18823000 18823000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37415 2689 33387 311379 246516 246516 1 NGVFVDGAFQR Unmodified 1208.5938 0.5938206 2019 P85037 FOXK1 Forkhead box protein K1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 63.425 63.511 2 0.032637 72265 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 45.137 40.153 156860000 0 0 0 10940000 10333000 10852000 12812000 12202000 0 15877000 15540000 16701000 13723000 17656000 20224000 37416 2019 33388 311380;311381;311382;311383;311384;311385;311386;311387;311388;311389;311390 246517;246518;246519 246519 2 NGVFVDGVFQR Unmodified 1236.6251 0.62512073 2051 Q01167 FOXK2 Forkhead box protein K2 yes yes 0 0 0 By matching By MS/MS By matching By matching 10 0 4 1 1 1 1 74.142 74.313 2 0.029835 85665 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 49.715 38.85 14708000 0 0 0 0 0 1790400 0 4602100 1665100 0 0 0 0 0 6650800 37417 2051 33389 311391;311392;311393;311394 246520 246520 1 NGVGTSSSMGSGVSDDVFSSSR Unmodified 2118.9124 0.91239014 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS 10 0 1 1 63.115 63.457 2 4.9965E-13 72552 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 92.063 86.886 4169500 0 0 0 0 0 0 0 0 0 0 4169500 0 0 0 0 37418 1029 33390 311395 246521 246521 1 NGVGTSSSMGSGVSDDVFSSSRHESVSK Unmodified 2786.2413 0.24132886 1029 P15924 DSP Desmoplakin yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 60.587 54.54 4 8.127E-11 73747 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.155 58.202 21236000 14072000 0 7163600 0 0 0 0 0 0 0 0 0 0 0 0 37419 1029 33391 311396;311397 246522;246523;246524 246522 3 NGVIFQEGGEK Unmodified 1176.5775 0.57750184 3465 Q8NI27 THOC2 THO complex subunit 2 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 40.776 41.017 2 0.00063009 45617 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 78.939 65.902 117490000 0 0 0 0 6766500 10201000 8908000 7842400 6745700 8926500 11921000 13206000 17190000 10239000 15543000 37420 3465 33392 311398;311399;311400;311401;311402;311403;311404;311405;311406;311407;311408 246525;246526;246527;246528;246529;246530;246531;246532;246533 246531 9 NGVMPSHFSR Oxidation (M) 1146.524 0.52402648 1401 P39019 RPS19 40S ribosomal protein S19 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 2 1 1 1 2 1 18.337 18.582 2;3 0.0019524 17700 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.334 66.379 81515000 0 0 0 0 2156200 2338500 0 11131000 1352400 18213000 16807000 4615200 3584100 15697000 5620200 37421 1401 33393 311409;311410;311411;311412;311413;311414;311415;311416;311417;311418;311419;311420 246534;246535;246536;246537;246538;246539 246536 2185 2 NGVMPSHFSR Unmodified 1130.5291 0.52911186 1401 P39019 RPS19 40S ribosomal protein S19 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 32.188 32.426 2 0.0019776 34015 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.258 77.67 94579000 0 0 0 0 4769100 3773700 4727700 8111700 4289200 7285800 11065000 16179000 11106000 7559300 15712000 37422 1401 33393 311421;311422;311423;311424;311425;311426;311427;311428;311429;311430;311431 246540;246541;246542;246543 246541 4 NGVNQGVAYK Unmodified 1048.5302 0.53015772 4846 Q9UBL3 ASH2L Set1/Ash2 histone methyltransferase complex subunit ASH2 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.008 20.208 2 0.0011825 19531 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 109.01 79.636 133510000 0 0 0 6812500 7304300 8035500 7446600 10893000 7080800 14936000 13278000 15382000 12073000 12651000 17613000 37423 4846 33394 311432;311433;311434;311435;311436;311437;311438;311439;311440;311441;311442;311443 246544;246545;246546;246547 246544 4 NGVPAVGLK Unmodified 853.50215 0.50215205 1721 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43.851 42.84 2 0.0056908 48947 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 77.058 52.384 965210000 23987000 579760000 8703500 19356000 19364000 24984000 23860000 24760000 21559000 28172000 37829000 33601000 36276000 30160000 52837000 37424 1721 33395 311444;311445;311446;311447;311448;311449;311450;311451;311452;311453;311454;311455;311456;311457;311458 246548;246549;246550;246551;246552;246553;246554;246555;246556 246556 9 NGVQAMVEFDSVQSAQRAK Unmodified 2064.0058 0.0058370195 1008 P14866 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 2 1 1 74.448 69.38 3 3.201E-77 89752 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 131.45 125.12 251830000 204710000 45516000 1607800 0 0 0 0 0 0 0 0 0 0 0 0 37425 1008 33396 311459;311460;311461;311462 246557;246558;246559;246560;246561;246562 246560 6 NGVQAMVEFDSVQSAQRAK Oxidation (M) 2080.0008 0.0007516416 1008 P14866 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes yes 0 1 1 By MS/MS 2.5 0.5 1 1 2 60.776 54.007 3 8.2383E-07 72788 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.344 86.446 37542000 37542000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37426 1008 33396 311463;311464 246563;246564;246565;246566 246565 1381 4 NGVQLLSR Unmodified 885.50321 0.50321468 2945 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 42.351 42.519 2 0.0095736 45982 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.452 46.267 178250000 0 0 0 10404000 8340500 10702000 12389000 10210000 8775300 16631000 23710000 28164000 24214000 0 24707000 37427 2945 33397 311465;311466;311467;311468;311469;311470;311471;311472;311473;311474;311475 246567;246568;246569;246570;246571 246567 5 NGVYISEENFR Unmodified 1326.6204 0.62042929 1695 P52732 KIF11 Kinesin-like protein KIF11 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 58.711 58.326 2 0.0057959 66335 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 70.908 50.283 15153000 0 0 0 3646600 4161100 7345100 0 0 0 0 0 0 0 0 0 37428 1695 33398 311476;311477;311478 246572;246573 246572 2 NGYELSPTAAANFTR Unmodified 1610.7689 0.76888444 1589 P49721 PSMB2 Proteasome subunit beta type-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 71.867 71.93 2 1.1046E-26 82110 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 126.12 112.46 113660000 0 0 0 7589800 3261000 0 5708000 6339600 0 7524000 17563000 16398000 0 13206000 36076000 37429 1589 33399 311479;311480;311481;311482;311483;311484;311485;311486;311487 246574;246575;246576;246577;246578;246579;246580;246581;246582 246575 8 NGYEYEESTK Unmodified 1218.5041 0.50406212 535 O75717 WDHD1 WD repeat and HMG-box DNA-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 20.374 20.181 2 0.010972 19896 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 55.064 48.24 59226000 0 25101000 0 2511000 2275600 0 2624500 1694400 2660200 0 7124400 4422300 0 2622200 8190900 37430 535 33400 311488;311489;311490;311491;311492;311493;311494;311495;311496;311497 246583;246584;246585;246586;246587;246588;246589 246588 7 NGYGFINR Unmodified 939.45626 0.45626449 1955;1044 P67809;Q9Y2T7;P16989 YBX1;YBX2;YBX3 Nuclease-sensitive element-binding protein 1;Y-box-binding protein 2;Y-box-binding protein 3 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 44.08 44.253 2 3.0055E-36 49712 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 187.14 160.02 2509400000 0 0 0 116850000 185090000 195600000 136140000 133500000 120000000 197530000 238690000 351580000 296690000 251410000 286300000 37431 1955;1044 33401 311498;311499;311500;311501;311502;311503;311504;311505;311506;311507;311508;311509 246590;246591;246592;246593;246594;246595;246596;246597;246598;246599;246600;246601;246602;246603;246604;246605;246606;246607 246599 18 NGYGFINRNDTK Unmodified 1397.6688 0.66877646 1955;1044 P67809;Q9Y2T7;P16989 YBX1;YBX2;YBX3 Nuclease-sensitive element-binding protein 1;Y-box-binding protein 2;Y-box-binding protein 3 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 1 2 1 1 1 1 2 35.232 35.413 2;3 2.2582E-62 37642 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 230.61 199.93 1791800000 0 0 0 61370000 91753000 111900000 129070000 109650000 108760000 202750000 156870000 229520000 184630000 162180000 243390000 37432 1955;1044 33402 311510;311511;311512;311513;311514;311515;311516;311517;311518;311519;311520;311521;311522;311523 246608;246609;246610;246611;246612;246613;246614;246615;246616;246617;246618;246619;246620;246621;246622 246613 11 NGYGFVEFDDLRDADDAVYELNGK Unmodified 2721.2195 0.21945443 2149 Q08170 SRSF4 Serine/arginine-rich splicing factor 4 yes yes 0 0 1 By MS/MS 2 0 1 1 93.992 85.861 3 6.5923E-05 111174 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.398 57.857 11556000 11556000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37433 2149 33403 311524 246623;246624 246623 2 NGYGFVEFEDSRDADDAVYELNGK Unmodified 2709.1831 0.18306892 2260 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 yes yes 0 0 1 By MS/MS 2 0 1 1 87.056 78.926 3 0.0043133 102818 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 32.487 29.5 16259000 16259000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37434 2260 33404 311525 246625 246625 1 NGYQPHRPPGGGGGK Unmodified 1477.7175 0.71745799 3047 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 8.5682 8.6754 3 0.032114 7005 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 36.022 27.978 50607000 0 0 0 2649100 3626300 2423400 2236500 2303600 3737300 5366600 0 10269000 7385400 3435000 7174700 37435 3047 33405 311526;311527;311528;311529;311530;311531;311532;311533;311534;311535;311536 246626;246627 246627 0 NGYVTVSEIK Unmodified 1108.5764 0.57643921 3862 Q96H20 SNF8 Vacuolar-sorting protein SNF8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 49.022 49.04 2 0.03441 54396 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 41.796 12.379 27707000 0 0 0 0 2596200 0 5736600 6526900 0 7552500 0 0 0 5294700 0 37436 3862 33406 311537;311538;311539;311540;311541 246628;246629 246629 2 NHAAPFSK Unmodified 870.4348 0.43480077 1337;3633 P34932;Q92598 HSPA4;HSPH1 Heat shock 70 kDa protein 4;Heat shock protein 105 kDa no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 6.82 3.81 5 2 10 3 2 2 1 1 1 1 1 1 1 1 1 1 12.474 11.249 2 1.1016E-06 9079 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 180.93 148.46 10270000000 6405200000 1028800000 2691500000 9279000 0 6507600 8254000 5764600 0 8038100 25390000 17850000 1221400 22630000 39248000 37437 1337;3633 33407 311542;311543;311544;311545;311546;311547;311548;311549;311550;311551;311552;311553;311554;311555;311556;311557;311558 246630;246631;246632;246633;246634;246635;246636;246637;246638;246639;246640;246641;246642;246643;246644;246645;246646;246647 246641 16 NHAGSPGCEESDAGK Unmodified 1514.6056 0.60558386 1459 P42575 CASP2 Caspase-2;Caspase-2 subunit p18;Caspase-2 subunit p13;Caspase-2 subunit p12 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 1 4 1 1 1 1 1 1 1 1 1 1 1 1 6.3148 5.346 2;3 9.2274E-15 3408 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 102.63 100.13 148340000 4039100 104740000 0 2275000 2912000 3211200 3691000 2298500 2529400 3504500 0 4427500 3744600 4379700 6592300 37438 1459 33408 311559;311560;311561;311562;311563;311564;311565;311566;311567;311568;311569;311570;311571;311572;311573;311574;311575 246648;246649;246650;246651;246652;246653;246654;246655;246656;246657;246658;246659;246660 246652 13 NHAPGATEAFK Unmodified 1141.5516 0.55162144 4734 Q9NXW2 DNAJB12 DnaJ homolog subfamily B member 12 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 23.502 19.53 2 0.011363 27786 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.535 42.216 11073000 8271300 0 2801900 0 0 0 0 0 0 0 0 0 0 0 0 37439 4734 33409 311576;311577 246661;246662 246661 2 NHARVTVVCEPEDYVVVSTEMQSSESK Oxidation (M) 3095.4176 0.41757866 1307 P31939 ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes yes 0 1 1 By MS/MS 2 0 1 1 75.029 66.898 3 1.4324E-21 88286 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85 78.636 20276000 20276000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37440 1307 33410 311578 246663 246663 1930 1 NHARVTVVCEPEDYVVVSTEMQSSESK Unmodified 3079.4227 0.42266404 1307 P31939 ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes yes 0 0 1 By MS/MS 2 0 1 1 80.147 72.016 3 7.2753E-30 94508 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 92.819 90.07 10772000 10772000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37441 1307 33410 311579 246664;246665 246664 2 NHDHQEIAVPVANLK Unmodified 1683.8693 0.86926718 523 O75607 NPM3 Nucleoplasmin-3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 55.102 55.178 3 0.0062271 61934 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 37.774 25.391 95333000 0 0 0 3125500 3151200 8799400 0 9106800 6075700 0 16648000 24692000 11556000 12179000 0 37442 523 33411 311580;311581;311582;311583;311584;311585;311586;311587;311588 246666;246667;246668;246669;246670;246671 246669 5 NHDTAISSHTVK Unmodified 1308.6422 0.64222736 3453 Q8NG31 CASC5 Protein CASC5 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 5 3.87 5 3 2 1 2 1 1 1 12.15 10.233 2;3 0.00040661 15901 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 114.71 80.457 145010000 106040000 10005000 16536000 0 0 0 1310700 0 0 0 0 5628700 0 0 5489300 37443 3453 33412 311589;311590;311591;311592;311593;311594;311595;311596 246672;246673;246674;246675;246676;246677 246673 4 NHEEEMKDLR Unmodified 1299.5877 0.58774895 72 CON__P13645;P13645 KRT10 Keratin, type I cytoskeletal 10 yes no 0 0 1 By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 14.061 14.241 3 0.0058469 13446 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 59.426 50.697 + 31722000 0 0 0 5802200 2127700 1832400 0 2549800 1309200 0 1206500 5510000 5959100 2736600 2688600 37444 72 33413 311597;311598;311599;311600;311601;311602;311603;311604;311605;311606 246678;246679;246680 246679 3 NHEEEMLALR Unmodified 1240.587 0.58702067 70 CON__P08779;P08779;CON__Q9Z2K1;CON__Q3ZAW8 KRT16 Keratin, type I cytoskeletal 16 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 23 2 2 2 2 2 2 2 2 2 2 2 1 46.764 46.909 2;3 1.0559E-58 53630 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 218.58 206.73 + 1586500000 0 0 0 239540000 33112000 16378000 30848000 148460000 24615000 100570000 65213000 74100000 787400000 57494000 8826300 37445 70 33414 311607;311608;311609;311610;311611;311612;311613;311614;311615;311616;311617;311618;311619;311620;311621;311622;311623;311624;311625;311626;311627;311628;311629 246681;246682;246683;246684;246685;246686;246687;246688;246689;246690;246691;246692;246693;246694;246695 246694 9 NHEEEMLALR Oxidation (M) 1256.5819 0.58193529 70 CON__P08779;P08779;CON__Q9Z2K1;CON__Q3ZAW8 KRT16 Keratin, type I cytoskeletal 16 yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 2 1 1 1 2 2 1 31.185 31.384 2;3 0.00070087 34466 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 126.31 118.39 + 553000000 0 0 0 66664000 11841000 11704000 25985000 54244000 9463400 19622000 10843000 40901000 287060000 14667000 0 37446 70 33414 311630;311631;311632;311633;311634;311635;311636;311637;311638;311639;311640;311641;311642;311643 246696;246697;246698;246699;246700;246701;246702;246703;246704;246705;246706;246707;246708;246709;246710;246711 246701 88 9 NHEEEMNALR Unmodified 1241.5459 0.54588413 56;84 CON__P02533;P02533;CON__Q04695;Q04695 KRT14;KRT17 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 17 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 22.45 22.655 2;3 1.0483E-31 22955 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 178.55 172.99 + 2685200000 0 0 0 548790000 89273000 139640000 72867000 309810000 54262000 200840000 187450000 287730000 561770000 119560000 113200000 37447 56;84 33415 311644;311645;311646;311647;311648;311649;311650;311651;311652;311653;311654;311655;311656;311657;311658;311659;311660;311661;311662;311663;311664;311665;311666;311667 246712;246713;246714;246715;246716;246717;246718;246719;246720;246721;246722;246723;246724;246725;246726;246727;246728;246729;246730 246725 14 NHEEEMNALR Oxidation (M) 1257.5408 0.54079876 56;84 CON__P02533;P02533;CON__Q04695;Q04695 KRT14;KRT17 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 17 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 25 2 2 2 2 2 2 2 2 2 3 2 2 9.6526 9.788 2;3 7.9707E-10 8354 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 149.82 140.42 + 1015800000 0 0 0 239370000 51153000 52451000 67365000 93985000 37696000 60628000 113060000 63908000 171120000 42469000 22552000 37448 56;84 33415 311668;311669;311670;311671;311672;311673;311674;311675;311676;311677;311678;311679;311680;311681;311682;311683;311684;311685;311686;311687;311688;311689;311690;311691;311692 246731;246732;246733;246734;246735;246736;246737;246738;246739;246740;246741;246742;246743;246744;246745;246746;246747;246748 246733 58 2 NHEMEEIRK Oxidation (M) 1200.5557 0.55572054 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 1 1 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 5.9612 5.5966 3 0.00094793 2787 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 99.815 45.207 252760000 25506000 0 93507000 11607000 0 13773000 9856300 7847600 0 16766000 11284000 16067000 12571000 13853000 20118000 37449 2431 33416 311693;311694;311695;311696;311697;311698;311699;311700;311701;311702;311703;311704 246749;246750;246751;246752;246753;246754;246755;246756 246753 3997 8 NHEMEEIRK Unmodified 1184.5608 0.56080592 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 11.194 11.121 3 0.00163 10146 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 81.95 46.628 163300000 0 0 24688000 4018900 3434800 11470000 8827600 8457500 6813600 12016000 10414000 25027000 12969000 0 35168000 37450 2431 33416 311705;311706;311707;311708;311709;311710;311711;311712;311713;311714;311715;311716 246757;246758;246759;246760;246761;246762;246763;246764;246765 246758 8 NHETVAAEYK Unmodified 1160.5462 0.54620171 2676 Q3V6T2 CCDC88A Girdin yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 17.193 14.283 2 0.0045527 17863 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 89.08 79.492 14667000 0 10522000 4145200 0 0 0 0 0 0 0 0 0 0 0 0 37451 2676 33417 311717;311718 246766;246767 246767 2 NHGSSPEQVVRPK Unmodified 1433.7375 0.73752473 301 O43164 PJA2 E3 ubiquitin-protein ligase Praja-2 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14.861 14.414 3 1.2006E-22 22539 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 122.46 112.13 219330000 132640000 5674800 0 3941000 5238200 5073200 3100200 3626400 3042900 6647000 9961600 10057000 8789200 7644200 13901000 37452 301 33418 311719;311720;311721;311722;311723;311724;311725;311726;311727;311728;311729;311730;311731;311732 246768;246769;246770;246771;246772;246773;246774 246771 7 NHHQQQVDSIIK Unmodified 1445.7375 0.73752473 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 27.162 26.026 3 0.00098398 36060 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.456 39.251 76449000 16846000 0 13194000 0 0 7648300 4812200 4035600 4721400 0 0 0 0 0 25192000 37453 2291 33419 311733;311734;311735;311736;311737;311738;311739 246775;246776;246777;246778;246779;246780;246781;246782 246778 7 NHIILQENAQHATR Unmodified 1643.8492 0.84920044 2862 Q69YN2 CWF19L1 CWF19-like protein 1 yes yes 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 26.089 26.244 3 0.0086387 28176 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 27.767 7.3854 8389200 0 0 0 0 0 5364800 0 0 1222700 0 0 0 0 1801700 0 37454 2862 33420 311740;311741;311742 246783 246783 1 NHINNELK Unmodified 980.50394 0.50394296 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.18 3.29 3 1 13 1 2 1 1 1 1 1 1 1 1 1 1 1 1 2 10.671 10.016 2 6.242E-19 15458 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 201.39 109.76 1024100000 463790000 117270000 262050000 11473000 9330200 13144000 16037000 9527900 11674000 13185000 23220000 17983000 17417000 16908000 21053000 37455 3676 33421 311743;311744;311745;311746;311747;311748;311749;311750;311751;311752;311753;311754;311755;311756;311757;311758;311759 246784;246785;246786;246787;246788;246789;246790;246791;246792;246793;246794;246795;246796;246797;246798;246799;246800 246792 17 NHIPITEQGDAPR Unmodified 1446.7215 0.72154031 3586 Q8WXD5 GEMIN6 Gem-associated protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 32.229 32.727 3 0.021959 34768 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 45.28 32.972 21564000 0 0 0 0 0 0 0 0 0 0 5357200 0 0 8118600 8088100 37456 3586 33422 311760;311761;311762 246801;246802;246803 246803 1 NHLEEHTDTCLPK Unmodified 1592.7253 0.72530506 1536 P48382 RFX5 DNA-binding protein RFX5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.486 26.685 3 3.7555E-08 27871 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 89.43 82.391 212770000 0 0 0 7763400 12757000 17685000 15249000 15796000 16971000 15971000 13240000 40714000 21259000 16041000 19322000 37457 1536 33423 311763;311764;311765;311766;311767;311768;311769;311770;311771;311772;311773;311774 246804;246805;246806;246807;246808;246809;246810;246811;246812 246811 8 NHLFTMMNVTEQEHK Oxidation (M) 1873.8451 0.84510262 297 O43149 ZZEF1 Zinc finger ZZ-type and EF-hand domain-containing protein 1 yes yes 0 1 0 By matching By matching By matching By matching By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 51.866 51.91 2 0.0037043 57711 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 42.001 31.897 71268000 0 0 0 4528500 7306200 0 0 12013000 4960400 6840500 0 29007000 6612300 0 0 37458 297 33424 311775;311776;311777;311778;311779;311780;311781 246813 246813 384;385 1 NHLGSYECK Unmodified 1106.4815 0.48149296 2534 Q15428 SF3A2 Splicing factor 3A subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 15.406 12.121 2 0.0062012 16217 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.52 71.268 146820000 65986000 31750000 49087000 0 0 0 0 0 0 0 0 0 0 0 0 37459 2534 33425 311782;311783;311784 246814;246815;246816;246817 246815 4 NHLILPER Unmodified 990.56106 0.56106391 2097 Q03468 ERCC6 DNA excision repair protein ERCC-6 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 38.724 38.848 2 0.016501 41476 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.169 57.822 38530000 0 0 0 3713600 2796400 4055900 3688600 0 0 3691500 4667700 0 5846000 4117500 5953100 37460 2097 33426 311785;311786;311787;311788;311789;311790;311791;311792;311793 246818;246819;246820;246821;246822;246823 246820 6 NHLLESEDSYTR Unmodified 1462.6688 0.66883604 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 13 2 2 1 1 1 1 2 2 1 34.985 35.194 2;3 0.00038349 38690 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 57.792 49.382 145580000 0 0 0 0 12070000 0 12446000 10978000 9678700 0 8575100 17101000 32323000 27892000 14519000 37461 2556 33427 311794;311795;311796;311797;311798;311799;311800;311801;311802;311803;311804;311805;311806 246824;246825;246826;246827;246828;246829;246830;246831;246832;246833 246827 8 NHLTTASNYNK Unmodified 1261.6051 0.60511357 3037 Q76L83 ASXL2 Putative Polycomb group protein ASXL2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 7.33 3.77 2 4 1 1 1 1 1 1 13.152 12.073 2;3 0.0014897 17571 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.37 76.323 28938000 13023000 0 2674400 0 3170300 3191100 3805100 0 3074400 0 0 0 0 0 0 37462 3037 33428 311807;311808;311809;311810;311811;311812 246834;246835;246836 246835 2 NHMYLFEGK Oxidation (M) 1153.5226 0.5226295 3184 Q86WJ1 CHD1L Chromodomain-helicase-DNA-binding protein 1-like yes yes 0 1 0 By MS/MS 1.5 0.5 1 1 2 51.566 38.513 2 0.015574 52839 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.264 64.997 13588000 13588000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37463 3184 33429 311813;311814 246837 246837 4810 1 NHPAPFSK Unmodified 896.45045 0.45045083 686 O95757 HSPA4L Heat shock 70 kDa protein 4L yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 14.128 13.348 2 0.0033881 19575 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 127.56 110.64 1583700000 996330000 229340000 318750000 1443800 0 2241800 2264900 1294500 1310500 2511400 6248600 3992000 2310700 4503600 11172000 37464 686 33430 311815;311816;311817;311818;311819;311820;311821;311822;311823;311824;311825;311826;311827;311828;311829 246838;246839;246840;246841;246842;246843;246844;246845;246846;246847 246843 9 NHPEEFCEFVK Unmodified 1434.6238 0.6238001 712 O96006 ZBED1 Zinc finger BED domain-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 59.734 55.95 3 0.0017706 69869 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 72.531 64.018 18586000 0 0 18586000 0 0 0 0 0 0 0 0 0 0 0 0 37465 712 33431 311830 246848 246848 0 NHPMTPEAVK Unmodified 1122.5492 0.5491786 1667 P51659 HSD17B4 Peroxisomal multifunctional enzyme type 2;(3R)-hydroxyacyl-CoA dehydrogenase;Enoyl-CoA hydratase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 19.597 18.942 2 0.0055591 26145 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.355 53.933 40231000 7264300 12550000 0 0 2384300 2103700 0 2264000 1497100 4245500 2498300 0 1865700 1053000 2504300 37466 1667 33432 311831;311832;311833;311834;311835;311836;311837;311838;311839;311840;311841 246849;246850;246851;246852;246853;246854;246855 246851 7 NHPMTPEAVK Oxidation (M) 1138.5441 0.54409322 1667 P51659 HSD17B4 Peroxisomal multifunctional enzyme type 2;(3R)-hydroxyacyl-CoA dehydrogenase;Enoyl-CoA hydratase 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 12.779 12.242 2 0.013644 11112 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 47.082 31.643 44535000 0 29951000 0 3642500 0 3208200 2256200 2125300 0 3351400 0 0 0 0 0 37467 1667 33432 311842;311843;311844;311845;311846;311847;311848 246856;246857;246858 246858 2680 3 NHQEILK Unmodified 880.47667 0.47666558 3414 Q8ND24 RNF214 RING finger protein 214 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 11.147 10.56 2 0.021858 16324 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 108.7 30.081 86831000 34457000 0 39510000 0 1373100 0 1411700 0 1595500 1827500 0 3060000 0 337070 3259000 37468 3414 33433 311849;311850;311851;311852;311853;311854;311855;311856;311857 246859;246860;246861;246862 246860 3 NHQLEVTPK Unmodified 1064.5615 0.56145784 4369 Q9H2K8 TAOK3 Serine/threonine-protein kinase TAO3 yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 23.845 19.345 2 2.3553E-06 25815 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 166.61 129.91 30845000 11980000 18865000 0 0 0 0 0 0 0 0 0 0 0 0 0 37469 4369 33434 311858;311859 246863 246863 1 NHQVQQLK Unmodified 993.53558 0.53557744 672 O95613 PCNT Pericentrin yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 9.2518 6.2467 2 0.0031941 10632 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 119.57 95.594 29765000 25486000 0 4279300 0 0 0 0 0 0 0 0 0 0 0 0 37470 672 33435 311860;311861 246864;246865;246866 246864 3 NHSDSSTSESEVSSVSPLK Unmodified 1975.8971 0.89705766 4736 Q9NY27 PPP4R2 Serine/threonine-protein phosphatase 4 regulatory subunit 2 yes yes 0 0 0 By matching By MS/MS 2.33 0.471 2 1 1 2 48.369 42.256 3 4.6569E-06 52685 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 55.707 53.483 207960000 7545700 200410000 0 0 0 0 0 0 0 0 0 0 0 0 0 37471 4736 33436 311862;311863;311864 246867;246868;246869 246869 3 NHSGNDERDEEDEERESK Unmodified 2173.8744 0.87442473 3244 Q8IWS0 PHF6 PHD finger protein 6 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 4 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 5.7365 5.1199 3;4 2.8588E-75 5850 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 168.32 166.35 544700000 180240000 0 149660000 10576000 7800600 10929000 8842900 13757000 10157000 15511000 15623000 36641000 31490000 16319000 37150000 37472 3244 33437 311865;311866;311867;311868;311869;311870;311871;311872;311873;311874;311875;311876;311877;311878;311879;311880 246870;246871;246872;246873;246874;246875;246876;246877;246878;246879;246880;246881;246882;246883;246884 246876 14 NHSTVTVEEAK Unmodified 1213.5939 0.59388018 2370 Q14134 TRIM29 Tripartite motif-containing protein 29 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 4 24 2 2 2 2 2 2 2 2 2 2 2 2 2 2 12.628 12.352 2;3 0.00029439 11064 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 103.26 89.098 357920000 0 201780000 22239000 13992000 7830100 7254300 9055000 11957000 5855700 13460000 10132000 14777000 13316000 8320500 17945000 37473 2370 33438 311881;311882;311883;311884;311885;311886;311887;311888;311889;311890;311891;311892;311893;311894;311895;311896;311897;311898;311899;311900;311901;311902;311903;311904;311905;311906;311907;311908 246885;246886;246887;246888;246889;246890;246891;246892;246893;246894;246895;246896;246897;246898;246899;246900;246901;246902;246903;246904;246905;246906 246902 14 NHTHQQDIDDLK Unmodified 1462.6801 0.68006943 1841 P61244 MAX Protein max yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.57 3.96 3 4 1 1 1 1 1 1 1 19.663 18.046 3 4.9721E-05 26289 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.861 81.971 128660000 51943000 14828000 45973000 0 0 4014100 3394500 4326600 4181600 0 0 0 0 0 0 37474 1841 33439 311909;311910;311911;311912;311913;311914;311915 246907;246908;246909 246908 2 NHTIPGFQQAS Unmodified 1198.5731 0.57308516 4524 Q9HD15 SRA1 Steroid receptor RNA activator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 6.9 3.81 3 1 6 1 2 1 1 1 1 1 1 1 47.585 45.57 2 0.00042932 61848 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.15 94.117 681920000 162460000 447020000 11297000 0 0 0 4848300 0 0 7946400 9325300 10284000 0 9618700 19126000 37475 4524 33440 311916;311917;311918;311919;311920;311921;311922;311923;311924;311925 246910;246911;246912;246913;246914;246915;246916;246917;246918;246919 246916 10 NHTLLQSSEGK Unmodified 1212.6099 0.6098646 4770 Q9NZJ4 SACS Sacsin yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 22.468 18.579 2 0.043195 26944 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.228 40.348 7687800 5689400 0 1998400 0 0 0 0 0 0 0 0 0 0 0 0 37476 4770 33441 311926;311927 246920;246921 246920 1 NHTLQEQVTQLTEK Unmodified 1667.8479 0.84786304 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 6.08 3.93 5 1 6 2 2 2 1 1 1 1 1 1 59.261 56.535 2;3 3.0992E-88 71332 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 251.3 234.63 359680000 62585000 193210000 73056000 0 0 2487900 0 2233500 0 0 3449600 8764000 0 3833100 10057000 37477 2495 33442 311928;311929;311930;311931;311932;311933;311934;311935;311936;311937;311938;311939 246922;246923;246924;246925;246926;246927;246928;246929;246930;246931;246932 246930 11 NHTVMFDTLK Unmodified 1204.591 0.59104341 4292 Q9C0I1 MTMR12 Myotubularin-related protein 12 yes yes 0 0 0 By MS/MS 2 0 1 1 62.529 54.261 3 0.047688 73465 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.879 42.522 16691000 16691000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37478 4292 33443 311940 246933 246933 0 NHVAAHGQSLLK Unmodified 1273.6891 0.68911797 3897 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 19.539 19.09 3 0.00039316 27984 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.964 60.233 245840000 77038000 0 6215500 13096000 8380800 21285000 9174500 0 12647000 17133000 8300000 20892000 12227000 13511000 25942000 37479 3897 33444 311941;311942;311943;311944;311945;311946;311947;311948;311949;311950;311951;311952;311953 246934;246935;246936;246937;246938;246939;246940;246941;246942 246937 6 NHVCQYYIYELQK Unmodified 1756.8243 0.82429083 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 71.912 66.006 3 0.0002278 87310 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.987 56.159 55559000 47478000 0 8081300 0 0 0 0 0 0 0 0 0 0 0 0 37480 4634 33445 311954;311955 246943;246944;246945 246943 3 NHVFNVDNAK Unmodified 1156.5625 0.56252048 3953 Q96Q15 SMG1 Serine/threonine-protein kinase SMG1 yes yes 0 0 0 By MS/MS 2 0 1 1 28.657 25.551 2 0.0054224 32328 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 85.731 69.528 12442000 0 0 12442000 0 0 0 0 0 0 0 0 0 0 0 0 37481 3953 33446 311956 246946 246946 1 NHWEELSK Unmodified 1041.488 0.48795855 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 32.037 27.323 2 0.0098767 34293 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 113.71 102.34 14911000 8696400 0 6214700 0 0 0 0 0 0 0 0 0 0 0 0 37482 5049 33447 311957;311958 246947;246948;246949 246948 3 NHYIPLVGIK Unmodified 1152.6655 0.66552898 3893 Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 66.208 66.457 2 0.016551 75270 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.712 35.352 8305500 0 0 0 0 0 3445900 0 0 0 0 0 0 0 0 4859600 37483 3893 33448 311959;311960 246950 246950 1 NHYNEEMSNLR Unmodified 1405.6045 0.60446165 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 17 2 2 1 2 2 1 1 2 2 1 1 30.231 30.385 2;3 0.0009536 32973 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 57.225 53.904 154800000 0 0 0 22839000 10650000 5995600 8972600 40794000 0 11206000 7705200 17292000 14957000 4742000 9648200 37484 1029 33449 311961;311962;311963;311964;311965;311966;311967;311968;311969;311970;311971;311972;311973;311974;311975;311976;311977 246951;246952;246953;246954;246955;246956;246957;246958 246953 8 NHYNEEMSNLR Oxidation (M) 1421.5994 0.59937627 1029 P15924 DSP Desmoplakin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 14.524 14.668 3 0.002561 14215 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 50.95 47.629 61156000 0 0 0 10411000 4150000 0 3106400 14357000 4715500 7137600 3985400 7093200 6199800 0 0 37485 1029 33449 311978;311979;311980;311981;311982;311983;311984;311985;311986 246959;246960 246960 1438 1 NHYVPLK Unmodified 869.47594 0.4759373 4264 Q9BZF9 UACA Uveal autoantigen with coiled-coil domains and ankyrin repeats yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 23.065 22.649 2 0.031352 35025 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.673 54.568 93797000 53142000 0 0 2152600 2637000 3911500 3238500 2924200 3028700 6156300 4569300 0 5959300 6078000 0 37486 4264 33450 311987;311988;311989;311990;311991;311992;311993;311994;311995;311996;311997 246961;246962;246963 246961 3 NIADLMTQAGVEELESENK Oxidation (M) 2105.9787 0.9786788 510 O75506 HSBP1 Heat shock factor-binding protein 1 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 78.346 74.268 2 0 92285 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 296.49 283.72 91157000 0 91157000 0 0 0 0 0 0 0 0 0 0 0 0 0 37487 510 33451 311998;311999 246964;246965 246964 659 2 NIADLMTQAGVEELESENK Unmodified 2089.9838 0.98376417 510 O75506 HSBP1 Heat shock factor-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.12 2.62 6 1 1 2 3 2 1 92.03 87.767 2;3 1.5441E-243 109741 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 308.68 308.68 421510000 35273000 374000000 8015800 0 0 0 0 0 0 0 0 0 0 0 4220300 37488 510 33451 312000;312001;312002;312003;312004;312005;312006;312007 246966;246967;246968;246969;246970;246971;246972;246973 246966 7 NIAELAALSQDELTSILGNAANAK Unmodified 2426.2653 0.26528241 3680 Q92889 ERCC4 DNA repair endonuclease XPF yes yes 0 0 0 By MS/MS 2 0 1 1 102.36 97.645 3 2.7212E-16 120608 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.583 82.764 19265000 0 19265000 0 0 0 0 0 0 0 0 0 0 0 0 0 37489 3680 33452 312008 246974;246975 246975 2 NIAIQSQFTR Unmodified 1176.6251 0.62512073 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.569 55.698 2 0.010212 62799 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 66.692 40.955 174150000 0 0 0 8025200 8524300 13716000 12926000 9213000 9585700 12550000 17576000 23333000 14540000 14279000 29886000 37490 965 33453 312009;312010;312011;312012;312013;312014;312015;312016;312017;312018;312019;312020 246976;246977;246978;246979;246980;246981;246982;246983;246984;246985;246986 246980 10 NIANIMK Oxidation (M) 818.43202 0.43202358 326 O43414 ERI3 ERI1 exoribonuclease 3 yes yes 0 1 0 By matching By MS/MS 2 0 2 1 1 25.238 21.656 2 0.033139 27270 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 82.263 24.799 101150000 0 92111000 9039800 0 0 0 0 0 0 0 0 0 0 0 0 37491 326 33454 312021;312022 246987 246987 1 NIANTLMAK Oxidation (M) 990.51682 0.51681584 601 O94906 PRPF6 Pre-mRNA-processing factor 6 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.57 3.96 3 4 1 1 1 1 1 1 1 37.039 35.154 2 0.011925 46234 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.75 34.902 113480000 18787000 54751000 5625800 0 0 0 0 0 0 9287800 8928400 8348800 0 0 7754200 37492 601 33455 312023;312024;312025;312026;312027;312028;312029 246988;246989;246990;246991;246992;246993;246994 246989 750 7 NIAPNISR Unmodified 883.48756 0.48756462 4230 Q9BXP5 SRRT Serrate RNA effector molecule homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.459 32.646 2 0.0074056 34621 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 89.752 42.009 256300000 0 0 0 18900000 18161000 20798000 19061000 17582000 11952000 23428000 24767000 29173000 23939000 19120000 29420000 37493 4230 33456 312030;312031;312032;312033;312034;312035;312036;312037;312038;312039;312040;312041 246995;246996;246997;246998;246999;247000;247001 246999 7 NIAVETDVR Unmodified 1015.5298 0.52982336 4185 Q9BVC5 C2orf49 Ashwin yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 37.688 37.749 2 0.024533 40920 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 50.607 15.799 69544000 0 0 0 7089700 5842300 8271000 7090200 8421400 0 9690900 9112300 0 7725600 6301000 0 37494 4185 33457 312042;312043;312044;312045;312046;312047;312048;312049;312050 247002 247002 1 NICFTVWDVGGQDR Unmodified 1665.7569 0.75693954 1071 P18085 ARF4 ADP-ribosylation factor 4 yes yes 0 0 0 By MS/MS 10 0 1 1 85.099 85.277 2 0.028424 98436 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.198 43.933 3656800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3656800 37495 1071 33458 312051 247003 247003 0 NICQQVNIK Unmodified 1115.5757 0.5757277 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 38.731 38.439 2 0.0045489 42967 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 86.472 55.86 236060000 0 176700000 0 5433200 3106000 4315000 0 0 3093700 5413300 6761200 8348900 7884800 6680100 8324800 37496 2378 33459 312052;312053;312054;312055;312056;312057;312058;312059;312060;312061;312062 247004;247005;247006;247007;247008;247009;247010;247011;247012;247013 247004 7 NICSLATIQK Unmodified 1146.6067 0.60669348 5208 Q9Y4P8 WIPI2 WD repeat domain phosphoinositide-interacting protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 61.126 52.885 2 0.018925 71623 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.465 19.513 17094000 17094000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37497 5208 33460 312063 247014;247015 247015 2 NIDEHANEDVER Unmodified 1439.6277 0.62769951 1830 P61026 RAB10 Ras-related protein Rab-10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 19.123 19.319 2;3 2.2305E-23 19951 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 179.94 168.45 2671000000 0 0 0 143520000 122920000 150170000 173750000 196400000 116160000 313100000 372580000 412230000 221050000 167110000 281970000 37498 1830 33461 312064;312065;312066;312067;312068;312069;312070;312071;312072;312073;312074;312075;312076;312077;312078;312079;312080;312081;312082;312083;312084;312085;312086;312087 247016;247017;247018;247019;247020;247021;247022;247023;247024;247025;247026;247027;247028;247029;247030 247017 7 NIDINDVTPNCR Unmodified 1429.662 0.66197652 1876 P62195 PSMC5 26S protease regulatory subunit 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 55.978 55.645 2 2.014E-05 62883 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 104.52 87.087 536140000 0 27305000 0 34722000 40613000 45379000 14647000 14295000 12661000 78626000 87268000 117740000 13169000 17033000 32684000 37499 1876 33462 312088;312089;312090;312091;312092;312093;312094;312095;312096;312097;312098;312099;312100 247031;247032;247033;247034;247035;247036;247037;247038;247039;247040;247041;247042;247043 247041 13 NIDNFLNRYEK Unmodified 1424.7048 0.70482762 455 O75116 ROCK2 Rho-associated protein kinase 2 yes yes 0 0 1 By MS/MS 2 0 1 1 75.727 67.596 3 0.039715 89128 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.039 31.208 11172000 11172000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37500 455 33463 312101 247044 247044 1 NIDNPALADIYTEHAHQVVVAK Unmodified 2417.2339 0.2339227 453 O75083 WDR1 WD repeat-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 74.845 75.069 4 1.489E-33 86060 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 99.603 91.315 113020000 0 0 0 0 0 0 0 0 0 0 0 10831000 0 5424200 96767000 37501 453 33464 312102;312103;312104 247045;247046;247047 247045 3 NIDPKPCTPR Unmodified 1196.5972 0.59719142 3818 Q96EP5 DAZAP1 DAZ-associated protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 21.638 21.822 3 0.043551 21717 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 39.785 31.375 147960000 0 0 0 10327000 10496000 0 14907000 11451000 4348500 13484000 21998000 26656000 17065000 17230000 0 37502 3818 33465 312105;312106;312107;312108;312109;312110;312111;312112;312113;312114 247048 247048 0 NIDQCSEIVK Unmodified 1204.5758 0.57578728 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 35.807 34.934 2 0.0090337 37706 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 58.596 43.922 219620000 4489200 125220000 0 5500400 3780000 0 0 6128800 0 6772200 12566000 16080000 10078000 12211000 16794000 37503 3676 33466 312115;312116;312117;312118;312119;312120;312121;312122;312123;312124;312125 247049;247050;247051;247052 247051 4 NIDSEGRILNVDNMK Oxidation (M) 1732.8414 0.84139745 3485 Q8TC07 TBC1D15 TBC1 domain family member 15 yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 55.198 49.151 3 0.0057833 61881 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 48.177 36.032 33935000 8581900 0 25353000 0 0 0 0 0 0 0 0 0 0 0 0 37504 3485 33467 312126;312127 247053 247053 5008 1 NIEDVIAQGIGK Unmodified 1255.6772 0.67721588 807 P05387 RPLP2 60S acidic ribosomal protein P2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.2 3.74 7 2 16 3 5 1 1 1 1 1 1 1 1 2 2 1 2 2 80.763 79.551 2;3 7.4333E-15 98725 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 146.11 97.31 5688700000 84173000 3625400000 65310000 54192000 91940000 87453000 97043000 89106000 88116000 166540000 251670000 256280000 146490000 210460000 374450000 37505 807 33468 312128;312129;312130;312131;312132;312133;312134;312135;312136;312137;312138;312139;312140;312141;312142;312143;312144;312145;312146;312147;312148;312149;312150;312151;312152 247054;247055;247056;247057;247058;247059;247060;247061;247062;247063;247064;247065;247066;247067;247068;247069;247070 247057 15 NIEDYIHR Unmodified 1058.5145 0.51450765 4168 Q9BUQ8 DDX23 Probable ATP-dependent RNA helicase DDX23 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 48.175 48.337 2 0.025549 54011 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 58.604 24.601 96429000 0 0 0 4465600 2177500 9342500 6141100 0 7439700 7867900 11965000 14863000 12146000 8370300 11651000 37506 4168 33469 312153;312154;312155;312156;312157;312158;312159;312160;312161;312162;312163 247071;247072;247073;247074;247075 247075 5 NIEEHASADVEK Unmodified 1340.6208 0.62082322 1824 P61006 RAB8A Ras-related protein Rab-8A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 2 1 2 2 1 2 2 2 2 2 2 20.148 20.379 2;3 3.9833E-23 19683 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 160.11 132.1 1169200000 0 0 0 47856000 81098000 79820000 105400000 67493000 52666000 107080000 141130000 141280000 107790000 108060000 129490000 37507 1824 33470 312164;312165;312166;312167;312168;312169;312170;312171;312172;312173;312174;312175;312176;312177;312178;312179;312180;312181;312182;312183;312184 247076;247077;247078;247079;247080;247081;247082;247083;247084;247085;247086;247087;247088;247089;247090;247091 247080 9 NIEEHASSDVER Unmodified 1384.6219 0.62188585 3689 Q92930 RAB8B Ras-related protein Rab-8B yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 1 2 1 1 2 2 2 2 2 2 17.986 18.187 2;3 2.1236E-05 17636 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 93.058 73.271 130860000 0 0 0 10111000 9200000 2208100 12999000 2543700 2078900 16190000 18008000 17269000 12593000 9431300 18229000 37508 3689 33471 312185;312186;312187;312188;312189;312190;312191;312192;312193;312194;312195;312196;312197;312198;312199;312200;312201;312202;312203;312204;312205 247092;247093;247094;247095;247096;247097;247098;247099;247100 247096 7 NIEELQQQNQR Unmodified 1398.6852 0.68515481 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.339 29.53 2 1.4063E-15 31776 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 193.41 152.38 479280000 0 0 0 24418000 20381000 26205000 34022000 24866000 24101000 52220000 49876000 50675000 43895000 41326000 87297000 37509 965 33472 312206;312207;312208;312209;312210;312211;312212;312213;312214;312215;312216;312217 247101;247102;247103;247104;247105;247106;247107;247108;247109;247110;247111;247112;247113;247114 247102 13 NIEIDSPYEISR Unmodified 1434.6991 0.69907354 788 P04843 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.14 70.181 2 2.4838E-05 81322 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 109.42 87.955 82763000 0 0 0 9225300 5562900 6844600 6549400 8190300 5995700 8068500 7510800 12280000 7056100 5479500 0 37510 788 33473 312218;312219;312220;312221;312222;312223;312224;312225;312226;312227;312228;312229 247115;247116;247117;247118;247119;247120;247121;247122;247123;247124;247125;247126 247125 8 NIELAVMR Unmodified 944.51134 0.51133653 219 O14818 PSMA7 Proteasome subunit alpha type-7 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 64.376 64.541 2 0.0062194 74901 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 102.72 85.333 106310000 0 0 0 4561200 0 0 3691600 3001700 0 5209700 16330000 15916000 4232500 12539000 40827000 37511 219 33474 312230;312231;312232;312233;312234;312235;312236;312237;312238 247127;247128;247129;247130;247131;247132 247132 6 NIELAVMR Oxidation (M) 960.50625 0.50625115 219 O14818 PSMA7 Proteasome subunit alpha type-7 yes yes 0 1 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 47.967 48.14 2 0.019893 53186 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 55.676 36.04 120020000 0 0 0 12168000 4749300 0 5217300 5746900 3720300 0 22958000 18205000 6591900 12169000 28491000 37512 219 33474 312239;312240;312241;312242;312243;312244;312245;312246;312247;312248 247133;247134 247134 294 2 NIELAVMRR Unmodified 1100.6124 0.61244756 219 O14818 PSMA7 Proteasome subunit alpha type-7 yes yes 0 0 1 By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 52.634 52.88 2 0.024379 58552 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 125.98 103.09 55383000 0 0 0 0 668790 2516300 0 1411900 0 0 6694900 9378100 2949500 7866000 23897000 37513 219 33475 312249;312250;312251;312252;312253;312254;312255;312256 247135;247136;247137;247138 247135 4 NIELFFSGSAK Unmodified 1211.6186 0.61863837 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 0 0 By MS/MS 2 0 1 1 87.067 78.936 2 0.0054403 102601 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.17 51.049 12309000 12309000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37514 1201 33476 312257 247139 247139 1 NIELICQENEGENDPVLQR Unmodified 2269.0645 0.06447411 2564 Q15691 MAPRE1 Microtubule-associated protein RP/EB family member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 74.931 74.99 2;3 6.5328E-39 86035 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 116.82 102.34 236220000 0 0 0 7573600 7089100 29977000 11931000 10262000 10070000 23188000 28429000 22220000 14187000 17047000 54251000 37515 2564 33477 312258;312259;312260;312261;312262;312263;312264;312265;312266;312267;312268;312269;312270;312271;312272;312273;312274;312275;312276;312277;312278;312279;312280;312281 247140;247141;247142;247143;247144;247145;247146;247147;247148;247149;247150;247151;247152;247153;247154;247155 247144 15 NIEMTQEDVR Oxidation (M) 1249.5609 0.5608655 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.113 22.32 2 0.00038927 22823 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 130.96 104.58 355850000 0 0 0 16252000 12049000 22221000 14217000 15044000 13940000 37557000 38023000 57842000 55942000 29515000 43246000 37516 528 33478 312282;312283;312284;312285;312286;312287;312288;312289;312290;312291;312292;312293 247156;247157;247158;247159;247160;247161;247162;247163;247164 247163 691 9 NIEMTQEDVR Unmodified 1233.566 0.56595087 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.859 37.04 2 0.001426 40718 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 104.2 92.607 274170000 0 0 0 16249000 13389000 18867000 12081000 18390000 10747000 30824000 22507000 39369000 34548000 19507000 37693000 37517 528 33478 312294;312295;312296;312297;312298;312299;312300;312301;312302;312303;312304;312305 247165;247166;247167;247168;247169;247170;247171;247172 247168 8 NIENGLIR Unmodified 927.51378 0.51377937 4326 Q9H0E9 BRD8 Bromodomain-containing protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 44.908 44.93 2 0.041266 50208 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 50.025 20.218 90408000 0 0 0 8531200 9968800 0 10071000 8864300 7956800 14133000 14671000 0 0 16211000 0 37518 4326 33479 312306;312307;312308;312309;312310;312311;312312;312313 247173;247174 247173 2 NIEPTHAPFIEK Unmodified 1394.7194 0.71941505 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 2 2 60.462 55.146 2;3 0.0020104 74647 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.179 52.911 152750000 18000000 68535000 66212000 0 0 0 0 0 0 0 0 0 0 0 0 37519 5049 33480 312314;312315;312316;312317;312318 247175;247176;247177;247178;247179;247180 247178 6 NIEQMDTDHK Unmodified 1229.5347 0.53465075 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 15.996 16.173 2;3 0.0016243 16072 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 68.557 59.828 288190000 0 0 0 13405000 11221000 12192000 18113000 16601000 18682000 18003000 29366000 43935000 40273000 33716000 32678000 37520 2556 33481 312319;312320;312321;312322;312323;312324;312325;312326;312327;312328;312329;312330;312331;312332;312333;312334;312335;312336;312337;312338;312339;312340;312341;312342 247181;247182;247183;247184;247185;247186;247187;247188;247189;247190 247187 5 NIEQMDTDHK Oxidation (M) 1245.5296 0.52956537 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 1 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 2 1 6.6558 6.8028 2;3 0.0023905 3699 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 60.102 54.762 59865000 0 0 0 2358700 4206800 0 4420000 3676200 3940800 6432400 4798000 0 6629400 19135000 4267800 37521 2556 33481 312343;312344;312345;312346;312347;312348;312349;312350;312351;312352;312353 247191;247192;247193 247193 4203 3 NIEVPFKPAR Unmodified 1169.6557 0.65569258 1126 P21399 ACO1 Cytoplasmic aconitate hydratase yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 56.84 56.701 3 0.015574 64181 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 36.585 30.624 6798700 0 0 0 1962500 0 0 0 0 0 0 4836200 0 0 0 0 37522 1126 33482 312354;312355 247194 247194 1 NIEYPVDLEISK Unmodified 1418.7293 0.72931103 2439 Q14694 USP10 Ubiquitin carboxyl-terminal hydrolase 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.42 3.66 3 1 8 1 2 1 1 1 1 1 1 1 1 1 80.157 78.267 2 1.05E-12 96905 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.42 95.894 306860000 6958200 204630000 2133400 6185900 8771300 22215000 11669000 0 0 26102000 0 0 0 0 18197000 37523 2439 33483 312356;312357;312358;312359;312360;312361;312362;312363;312364;312365;312366;312367 247195;247196;247197;247198;247199;247200;247201;247202;247203;247204 247196 10 NIFAILQSVK Unmodified 1131.6652 0.66519463 2916 Q6P1J9 CDC73 Parafibromin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 92.131 92.271 2 0.0018498 106909 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.331 51.17 15334000 0 0 0 0 0 817280 0 1024800 759390 2282100 1388100 0 0 991820 8070800 37524 2916 33484 312368;312369;312370;312371;312372;312373;312374 247205;247206 247205 2 NIFESFVDYVAVEQLDGDNK Unmodified 2301.0801 0.0801074 3702 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 100.87 95.449 3 5.1747E-59 119696 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.234 87.946 32527000 24877000 7650900 0 0 0 0 0 0 0 0 0 0 0 0 0 37525 3702 33485 312375;312376;312377 247207;247208;247209 247209 3 NIFESFVDYVAVEQLDGDNKYDAGEHGLQEAEK Unmodified 3728.7118 0.71182965 3702 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 0 0 1 By MS/MS 2 0 1 1 99.301 91.171 4 1.0308E-15 117552 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.137 49.592 13892000 13892000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37526 3702 33486 312378 247210 247210 1 NIFPYHEVTVK Unmodified 1345.703 0.7030367 1355 P35573 AGL Glycogen debranching enzyme;4-alpha-glucanotransferase;Amylo-alpha-1,6-glucosidase yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 1 2 69.761 64.546 2;3 0.0048969 86471 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.841 34.474 127160000 109760000 0 17401000 0 0 0 0 0 0 0 0 0 0 0 0 37527 1355 33487 312379;312380;312381 247211;247212;247213 247211 3 NIGENEGGIDK Unmodified 1144.536 0.53603095 2101 Q04446 GBE1 1,4-alpha-glucan-branching enzyme yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 22.683 21.982 2 0.0027921 22820 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 66.056 45.535 344070000 0 289810000 0 2092100 1260400 0 0 1584100 0 0 11616000 9905400 0 8009200 19784000 37528 2101 33488 312382;312383;312384;312385;312386;312387;312388;312389;312390 247214;247215;247216;247217;247218 247216 3 NIGGQIQEK Unmodified 985.51926 0.51925868 4387 Q9H3U1 UNC45A Protein unc-45 homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 2 1 20.716 20.762 2 0.0034957 20209 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.29 78.783 104220000 0 0 0 15733000 13365000 26906000 0 0 0 0 0 0 0 0 48216000 37529 4387 33489 312391;312392;312393;312394;312395 247219;247220;247221;247222;247223;247224 247221 6 NIGLGFK Unmodified 747.42792 0.42792448 1888 P62280 RPS11 40S ribosomal protein S11 yes yes 0 0 0 By MS/MS By MS/MS By matching 2 0 3 1 1 1 60.814 54.83 1 0.012489 74269 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 154.11 24.153 155250000 83090000 55134000 17023000 0 0 0 0 0 0 0 0 0 0 0 0 37530 1888 33490 312396;312397;312398 247225 247225 0 NIGNTFFK Unmodified 939.48142 0.48141661 2162 Q08752 PPID Peptidyl-prolyl cis-trans isomerase D yes yes 0 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 2 2 67.472 60.664 1;2 0.011483 81026 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 123.98 42.602 521980000 377760000 144220000 0 0 0 0 0 0 0 0 0 0 0 0 0 37531 2162 33491 312399;312400;312401;312402 247226;247227;247228 247228 3 NIGRDTPTSAGPNSFNK Unmodified 1774.8598 0.85982471 3570 Q8WW12 PCNP PEST proteolytic signal-containing nuclear protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.19 3.31 5 1 20 3 2 1 1 1 1 1 2 2 2 2 2 2 2 2 36.705 35.659 2;3 2.7944E-22 44577 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 118.5 97.231 2240400000 1439500000 86550000 130210000 22077000 21848000 20490000 43064000 26788000 27178000 33880000 50943000 82362000 47715000 54471000 153280000 37532 3570 33492 312403;312404;312405;312406;312407;312408;312409;312410;312411;312412;312413;312414;312415;312416;312417;312418;312419;312420;312421;312422;312423;312424;312425;312426;312427;312428 247229;247230;247231;247232;247233;247234;247235;247236;247237;247238;247239;247240;247241;247242;247243;247244;247245;247246;247247;247248 247242 18 NIGVDNPAAK Unmodified 997.51926 0.51925868 1980 P78371 CCT2 T-complex protein 1 subunit beta yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.24 2 1 10 1 2 1 1 1 1 1 1 1 1 1 1 28.797 27.851 2 0.020507 33250 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 64.42 37.283 5181800000 167510000 2407000000 0 0 1543000 281560000 224520000 0 161910000 295230000 391310000 297740000 254340000 260650000 438500000 37533 1980 33493 312429;312430;312431;312432;312433;312434;312435;312436;312437;312438;312439;312440;312441 247249;247250;247251;247252;247253 247253 3 NIGWGTDQGIGGFGEEPGIK Unmodified 2030.9698 0.96976909 5251 Q9Y5U9 IER3IP1 Immediate early response 3-interacting protein 1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 82.741 82.878 2 5.489E-07 95851 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 82.34 59.461 15173000 0 0 0 0 0 2650000 982430 2842600 0 2456900 1877800 4363500 0 0 0 37534 5251 33494 312442;312443;312444;312445;312446;312447 247254;247255;247256 247255 3 NIHESCMSQIGWNR Unmodified 1730.7617 0.76170734 947 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase yes yes 0 0 0 By MS/MS 10 0 1 1 51.67 52.347 3 6.0792E-12 58262 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.904 80.568 16059000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16059000 37535 947 33495 312448 247257 247257 1 NIHESVSAQIRK Unmodified 1380.7474 0.74736113 3214 Q8IU85 CAMK1D Calcium/calmodulin-dependent protein kinase type 1D yes yes 0 0 1 By MS/MS 2 0 1 1 31.933 26.089 3 0.0087771 36454 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 39.73 24.343 13079000 13079000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37536 3214 33496 312449 247258 247258 1 NIHGYMK Unmodified 861.41671 0.41670786 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 0 By MS/MS 2 0 1 1 19.766 15.181 2 0.037978 22418 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.386 52.544 101590000 101590000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37537 3676 33497 312450 247259 247259 1 NIHLNLDRR Unmodified 1149.6367 0.63668847 5248 Q9Y5S9 RBM8A RNA-binding protein 8A yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 35.495 35.738 3 0.0025236 38255 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 71.349 44.642 248650000 0 0 0 4269000 0 23999000 0 8933600 16800000 0 0 35942000 20572000 28192000 109940000 37538 5248 33498 312451;312452;312453;312454;312455;312456;312457;312458 247260;247261;247262;247263 247263 2 NIHSSDWPK Unmodified 1082.5145 0.51450765 5076 Q9Y224 C14orf166 UPF0568 protein C14orf166 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 23.825 24.136 2 0.013807 25313 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 59.245 43.806 46934000 0 0 0 0 1797800 0 0 3835700 0 5527500 7260400 10042000 6030300 0 12440000 37539 5076 33499 312459;312460;312461;312462;312463;312464;312465 247264;247265;247266;247267;247268;247269 247264 6 NIHYNSVVNPNK Unmodified 1397.7052 0.70516197 3849 Q96G74 OTUD5 OTU domain-containing protein 5 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 32.572 33.164 2 0.01174 35243 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.945 26.165 10247000 0 0 0 0 0 0 0 0 0 0 4126800 0 0 0 6120400 37540 3849 33500 312466;312467 247270 247270 1 NIIGSSPVADFSAIK Unmodified 1517.809 0.80895834 1457 P42566 EPS15 Epidermal growth factor receptor substrate 15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.71 3.81 2 1 4 2 1 1 1 1 1 85.548 82.974 2 9.0576E-05 95656 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.466 23.343 160970000 0 143740000 7059300 0 0 0 0 0 0 0 0 0 0 0 10171000 37541 1457 33501 312468;312469;312470;312471;312472;312473;312474 247271;247272;247273;247274;247275;247276;247277;247278 247273 8 NIIGVIPYFPYSK Unmodified 1509.8232 0.82315184 2413 Q14558 PRPSAP1 Phosphoribosyl pyrophosphate synthase-associated protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 91.904 92.041 2 0.018343 106642 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.359 20.568 896190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 896190 37542 2413 33502 312475 247279 247279 1 NIIHGSDSVESAEK Unmodified 1484.7107 0.71070086 1022 P15531 NME1 Nucleoside diphosphate kinase A yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.25 2.33 3 29 1 1 1 2 3 2 3 3 2 2 2 4 2 2 2 28.072 27.96 2;3 7.1558E-73 29722 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 225.33 188.14 27041000000 149960 17620000 6800200 1092200000 1825000000 2232900000 3182700000 3272200000 2625600000 2531200000 3678500000 5558400000 95766000 179570000 742260000 37543 1022 33503 312476;312477;312478;312479;312480;312481;312482;312483;312484;312485;312486;312487;312488;312489;312490;312491;312492;312493;312494;312495;312496;312497;312498;312499;312500;312501;312502;312503;312504;312505;312506;312507 247280;247281;247282;247283;247284;247285;247286;247287;247288;247289;247290;247291;247292;247293;247294;247295;247296;247297;247298;247299;247300;247301;247302;247303;247304;247305;247306;247307;247308;247309;247310;247311;247312;247313;247314;247315 247291 35 NIIHGSDSVK Unmodified 1068.5564 0.55637247 1138 P22392;O60361 NME2;NME2P1 Nucleoside diphosphate kinase B;Putative nucleoside diphosphate kinase yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 2 1 1 1 1 1 1 17.116 17.293 2 1.509E-05 17120 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 144.77 96.922 6278200000 0 0 0 243700000 455370000 392220000 874460000 842550000 745020000 512280000 766230000 1276200000 16433000 32167000 121590000 37544 1138 33504 312508;312509;312510;312511;312512;312513;312514;312515;312516;312517;312518;312519;312520 247316;247317;247318;247319;247320;247321;247322;247323;247324;247325;247326;247327;247328;247329;247330;247331;247332;247333;247334;247335;247336;247337 247323 21 NIIIALIDR Unmodified 1039.639 0.63897988 3961 Q96QK1 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 87.679 87.813 2 0.02892 101481 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.794 29.7 13799000 0 0 0 0 0 827080 0 606910 0 1401900 1292200 1078500 0 1060800 7531200 37545 3961 33505 312521;312522;312523;312524;312525;312526;312527 247338 247338 1 NIILEEGK Unmodified 914.5073 0.50729701 1165 P23528 CFL1 Cofilin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.08 3.83 1 11 2 24 6 5 3 2 2 2 2 2 2 2 2 2 2 2 2 43.589 42.223 1;2 0.0052596 54287 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 156.01 48.999 19891000000 826370000 14700000000 611640000 117490000 82725000 110580000 130210000 98478000 83839000 178030000 589890000 498150000 124220000 375340000 1363800000 37546 1165 33506 312528;312529;312530;312531;312532;312533;312534;312535;312536;312537;312538;312539;312540;312541;312542;312543;312544;312545;312546;312547;312548;312549;312550;312551;312552;312553;312554;312555;312556;312557;312558;312559;312560;312561;312562;312563;312564;312565 247339;247340;247341;247342;247343;247344;247345;247346;247347;247348;247349;247350;247351;247352;247353;247354;247355;247356;247357;247358;247359;247360;247361;247362;247363;247364;247365;247366;247367;247368;247369;247370;247371;247372;247373 247364 33 NIILGGVK Unmodified 812.51199 0.51198846 1137 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.55 3.8 6 4 12 4 4 2 1 1 1 1 1 1 1 1 1 1 1 1 54.185 51.712 1;2 0.011827 56433 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.035 24.462 10615000000 6080300000 2798600000 1000100000 34625000 21910000 63975000 40170000 34384000 28251000 51216000 94614000 87536000 39399000 82763000 156750000 37547 1137 33507 312566;312567;312568;312569;312570;312571;312572;312573;312574;312575;312576;312577;312578;312579;312580;312581;312582;312583;312584;312585;312586;312587 247374;247375;247376;247377;247378;247379;247380;247381;247382;247383;247384;247385;247386;247387;247388;247389;247390;247391;247392;247393;247394 247379 19 NIIQGRPLPADLR Unmodified 1461.8416 0.84159587 4656 Q9NUY8 TBC1D23 TBC1 domain family member 23 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 62.385 62.518 3 0.015286 71064 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 37.013 14.435 60874000 0 0 0 2542400 0 9394000 3967600 5936800 2688100 0 0 12070000 6567600 5376600 12331000 37548 4656 33508 312588;312589;312590;312591;312592;312593;312594;312595;312596 247395;247396;247397;247398;247399 247399 5 NIISTEDAK Unmodified 989.50294 0.50293991 4761 Q9NZ63 C9orf78 Uncharacterized protein C9orf78 yes yes 0 0 0 By MS/MS 10 0 1 1 26.263 26.608 2 0.026097 28564 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 49.96 8.7726 15875000 0 0 0 0 0 0 0 0 0 0 0 0 15875000 0 0 37549 4761 33509 312597 247400 247400 1 NIITNLSK Unmodified 901.52328 0.52328142 945 P11387 TOP1 DNA topoisomerase 1 yes yes 0 0 0 By MS/MS By matching By MS/MS 2 0 3 1 1 1 56.566 50.584 2 0.017059 62948 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 91.069 34.978 444610000 162730000 265240000 16640000 0 0 0 0 0 0 0 0 0 0 0 0 37550 945 33510 312598;312599;312600 247401;247402 247402 2 NILAEELSTNK Unmodified 1230.6456 0.6455814 3595 Q8WXW3 PIBF1 Progesterone-induced-blocking factor 1 yes yes 0 0 0 By MS/MS 10 0 1 1 59.236 58.555 2 0.03602 67435 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 37.476 9.7334 3790600 0 0 0 3790600 0 0 0 0 0 0 0 0 0 0 0 37551 3595 33511 312601 247403 247403 1 NILASNPR Unmodified 883.48756 0.48756462 4676;5091 Q9NVP2;Q9Y294 ASF1B;ASF1A Histone chaperone ASF1B;Histone chaperone ASF1A no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.817 27.017 2 0.004491 29257 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 131.04 65.785 378050000 0 0 0 26482000 28366000 35434000 31538000 16602000 23027000 34929000 42354000 45166000 29664000 27679000 36812000 37552 4676;5091 33512 312602;312603;312604;312605;312606;312607;312608;312609;312610;312611;312612;312613 247404;247405;247406;247407;247408;247409;247410;247411 247404 8 NILDFPQHVSPSK Unmodified 1480.7674 0.76742787 1704 P52888 THOP1 Thimet oligopeptidase yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 68.209 68.28 3 0.014455 78085 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 37.013 23.6 134390000 0 0 0 2888700 1610900 3339500 2965000 3094500 0 4860200 21065000 13518000 3728100 14291000 63032000 37553 1704 33513 312614;312615;312616;312617;312618;312619;312620;312621;312622;312623;312624 247412;247413 247413 1 NILDRQDPPSVVVTSHQAPGEK Unmodified 2386.2241 0.2240863 1185 P25311 AZGP1 Zinc-alpha-2-glycoprotein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.64 1.67 1 21 1 2 2 1 2 1 1 2 2 2 2 2 2 58.472 58.203 3;4 2.8841E-72 65677 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 129.43 124.3 1238700000 6591900 0 0 324230000 55792000 36133000 62926000 22027000 14619000 109780000 121280000 181440000 108340000 87976000 107550000 37554 1185 33514 312625;312626;312627;312628;312629;312630;312631;312632;312633;312634;312635;312636;312637;312638;312639;312640;312641;312642;312643;312644;312645;312646 247414;247415;247416;247417;247418;247419;247420;247421;247422;247423;247424;247425;247426;247427;247428;247429;247430;247431;247432;247433;247434;247435;247436;247437;247438 247432 22 NILDSKPTANK Unmodified 1199.651 0.65100113 5008 Q9ULV4 CORO1C Coronin-1C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.56 3.62 8 2 22 3 4 3 2 2 2 2 2 1 2 1 2 2 2 2 27.809 26.533 2;3 4.5229E-10 33270 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 152.34 99.625 2063400000 1150200000 296960000 302550000 22536000 21618000 34359000 22814000 17455000 3239200 26467000 12537000 48384000 19895000 27702000 56720000 37555 5008 33515 312647;312648;312649;312650;312651;312652;312653;312654;312655;312656;312657;312658;312659;312660;312661;312662;312663;312664;312665;312666;312667;312668;312669;312670;312671;312672;312673;312674;312675;312676;312677;312678 247439;247440;247441;247442;247443;247444;247445;247446;247447;247448;247449;247450;247451;247452;247453;247454;247455;247456;247457;247458;247459;247460 247455 16 NILDVARQLNDAH Unmodified 1477.7637 0.76373948 865 P08397 HMBS Porphobilinogen deaminase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 2 2 1 82.133 77.374 2;3 0.012852 98262 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.915 40.876 118330000 75595000 41144000 1588800 0 0 0 0 0 0 0 0 0 0 0 0 37556 865 33516 312679;312680;312681;312682;312683 247461;247462;247463 247463 3 NILEENLR Unmodified 999.53491 0.53490874 3964 Q96R06 SPAG5 Sperm-associated antigen 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 52.584 52.74 2 0.032702 60667 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 54.157 7.7314 147510000 0 0 0 7624300 0 15707000 9711000 10857000 8456800 17076000 16930000 0 17621000 15416000 28115000 37557 3964 33517 312684;312685;312686;312687;312688;312689;312690;312691;312692;312693 247464;247465 247465 2 NILEESLCELVAK Unmodified 1516.7807 0.78069468 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.5 2.93 4 1 1 1 3 1 1 96.03 92.156 2 8.4282E-09 114770 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.22 86.492 730390000 46934000 674510000 7204100 0 0 0 0 0 0 0 0 0 0 0 1749200 37558 1986 33518 312694;312695;312696;312697;312698;312699 247466;247467;247468;247469;247470;247471;247472;247473;247474;247475 247467 9 NILFVITKPDVYK Unmodified 1548.8916 0.89156576 112;4269 Q13765;E9PAV3;Q9BZK3 NACA;NACAP1 Nascent polypeptide-associated complex subunit alpha;Nascent polypeptide-associated complex subunit alpha, muscle-specific form;Putative nascent polypeptide-associated complex subunit alpha-like protein no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 1 2 1 2 2 2 2 2 1 1 2 82.442 82.535 2;3 1.2862E-06 95148 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 103.22 89.063 337530000 0 0 0 2465000 2440000 18770000 6205000 15983000 17047000 20765000 20653000 32980000 11444000 20129000 168650000 37559 112;4269 33519 312700;312701;312702;312703;312704;312705;312706;312707;312708;312709;312710;312711;312712;312713;312714;312715;312716;312717;312718 247476;247477;247478;247479;247480;247481;247482;247483;247484;247485;247486;247487;247488;247489;247490;247491 247482 15 NILGGTVFR Unmodified 975.55016 0.55016488 552;1553 O75874;P48735 IDH1;IDH2 Isocitrate dehydrogenase [NADP] cytoplasmic;Isocitrate dehydrogenase [NADP], mitochondrial no no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 70.26 70.396 2 0.0037093 80015 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 95.909 58.264 120370000 0 0 0 8025900 0 0 3485600 2698400 0 2985000 15086000 17033000 3640000 12842000 54575000 37560 552;1553 33520 312719;312720;312721;312722;312723;312724;312725;312726;312727 247492;247493;247494 247494 3 NILHQGQEAILQR Unmodified 1518.8267 0.82667409 3773 Q96C86 DCPS m7GpppX diphosphatase yes yes 0 0 0 By MS/MS 10 0 1 1 55.686 56.31 3 0.043752 63241 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.3 31.098 13977000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13977000 37561 3773 33521 312728 247495 247495 0 NILHVPADLDQEK Unmodified 1490.7729 0.77290718 5041 Q9UNS1 TIMELESS Protein timeless homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 63.989 64.303 3 0.044839 72883 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 28.779 21.324 17820000 0 0 0 0 0 0 0 3735200 0 0 0 0 0 4203500 9880900 37562 5041 33522 312729;312730;312731 247496 247496 1 NILIMAGDEASTIAEIIEECGGLEK Oxidation (M) 2691.2983 0.29829837 163 O00505 KPNA3 Importin subunit alpha-4 yes yes 0 1 0 By MS/MS By MS/MS 2.4 0.49 3 2 3 2 101.57 95.961 3 2.6047E-126 120588 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 163.71 150.52 102340000 81463000 20875000 0 0 0 0 0 0 0 0 0 0 0 0 0 37563 163 33523 312732;312733;312734;312735;312736 247497;247498;247499;247500 247499 227 4 NILIMAGDEASTIAEIIEECGGLEK Unmodified 2675.3034 0.30338375 163 O00505 KPNA3 Importin subunit alpha-4 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 103.71 97.284 3 3.5348E-92 122522 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 144.29 130.97 106520000 93277000 13247000 0 0 0 0 0 0 0 0 0 0 0 0 0 37564 163 33523 312737;312738 247501;247502;247503;247504 247503 4 NILITTNMMSSQNTANESSNALK Unmodified 2481.1839 0.18393732 2616 Q16594 TAF9 Transcription initiation factor TFIID subunit 9 yes yes 0 0 0 By MS/MS 2 0 1 1 82.573 74.442 3 0.00071851 97483 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 36.677 28.965 8155700 8155700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37565 2616 33524 312739 247505 247505 1 NILITTNMMSSQNTANESSNALK 2 Oxidation (M) 2513.1738 0.17376656 2616 Q16594 TAF9 Transcription initiation factor TFIID subunit 9 yes yes 0 2 0 By MS/MS 10 0 1 1 59.221 59.741 3 2.4636E-05 67944 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 43.198 35.577 7241300 0 0 0 0 0 0 0 0 0 0 0 7241300 0 0 0 37566 2616 33524 312740 247506 247506 4272;4273 1 NILLTIGSYK Unmodified 1120.6492 0.64921022 1224 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 80.207 79.564 2 0.0014533 101739 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.87 99.361 64290000 32787000 0 0 0 1422500 4218500 1188300 1933500 2482600 4025100 3347400 4940700 0 2733700 5210100 37567 1224 33525 312741;312742;312743;312744;312745;312746;312747;312748;312749;312750;312751 247507;247508 247508 2 NILMFTGETEATK Oxidation (M) 1469.7072 0.70719538 2945 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.95 3.44 4 1 14 1 2 2 2 1 1 1 1 1 1 1 2 1 1 1 70.098 68.789 2 2.5376E-09 78639 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 113.22 96.553 398760000 5844200 220720000 10359000 5250400 6499300 10545000 12864000 8666600 12499000 12766000 18869000 17530000 20991000 15914000 19440000 37568 2945 33526 312752;312753;312754;312755;312756;312757;312758;312759;312760;312761;312762;312763;312764;312765;312766;312767;312768;312769;312770 247509;247510;247511;247512;247513;247514;247515;247516;247517;247518;247519;247520;247521;247522;247523;247524;247525;247526;247527;247528;247529 247511 4582 20 NILMFTGETEATK Unmodified 1453.7123 0.71228076 2945 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 75.994 75.522 2 1.0079E-06 86422 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 115.57 86.847 299030000 0 116320000 4426900 6459500 7166300 10492000 7489900 12789000 8983900 12857000 16742000 23376000 13450000 16810000 41673000 37569 2945 33526 312771;312772;312773;312774;312775;312776;312777;312778;312779;312780;312781;312782;312783;312784;312785;312786 247530;247531;247532;247533;247534;247535;247536;247537;247538;247539;247540;247541;247542;247543;247544;247545;247546 247534 16 NILNKPEVNQK Unmodified 1295.7197 0.7197494 1695 P52732 KIF11 Kinesin-like protein KIF11 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30.509 29.649 3 0.0013372 43042 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 102.52 85.991 343560000 148080000 22264000 26539000 0 8282300 14231000 14933000 12809000 9175200 15861000 9215800 13360000 10141000 13047000 25627000 37570 1695 33527 312787;312788;312789;312790;312791;312792;312793;312794;312795;312796;312797;312798;312799;312800 247547;247548;247549;247550;247551;247552;247553;247554;247555;247556;247557 247552 8 NILPITTAK Unmodified 969.58588 0.58588168 2792;2829 Q5TAX3;Q5VYS8 ZCCHC11;ZCCHC6 Terminal uridylyltransferase 4;Terminal uridylyltransferase 7 no no 0 0 0 By MS/MS 10 0 1 1 60.262 60.454 2 0.038908 68056 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 44.753 8.0521 5874000 0 0 0 0 0 0 0 0 0 0 0 0 0 5874000 0 37571 2792;2829 33528 312801 247558 247558 1 NILPVDSSVK Unmodified 1070.5972 0.59717465 4995 Q9ULH7 MKL2 MKL/myocardin-like protein 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 7.86 3.4 1 1 5 2 1 1 1 1 1 57.299 56.034 2 0.0063632 63465 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 65.224 31.221 154660000 0 105190000 0 0 0 5382700 0 0 0 9967300 10492000 10390000 0 0 13239000 37572 4995 33529 312802;312803;312804;312805;312806;312807;312808 247559;247560;247561;247562 247562 4 NILPVESSLK Unmodified 1098.6285 0.62847478 3728 Q969V6 MKL1 MKL/myocardin-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 67.742 67.117 2 0.0054224 86194 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.731 43.132 160840000 0 95458000 0 0 0 4319800 5170700 4133900 3205200 6992200 6666100 8467600 6481000 7409100 12534000 37573 3728 33530 312809;312810;312811;312812;312813;312814;312815;312816;312817;312818;312819;312820 247563;247564;247565;247566;247567 247563 5 NILQLHDLTTGALLK Unmodified 1648.9512 0.9512059 1533 P48147 PREP Prolyl endopeptidase yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 92.598 86.078 3 0.00075885 109322 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.894 44.683 30663000 7839500 22823000 0 0 0 0 0 0 0 0 0 0 0 0 0 37574 1533 33531 312821;312822 247568;247569 247569 2 NILQSETEK Unmodified 1060.5401 0.5400537 2529 Q15398 DLGAP5 Disks large-associated protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 29.729 29.87 2 0.011616 32349 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 62.546 39.806 15300000 0 0 0 0 2158700 0 0 1779900 0 3446000 5015700 0 0 2899600 0 37575 2529 33532 312823;312824;312825;312826;312827;312828 247570;247571;247572 247570 3 NILSVVGTDALK Unmodified 1228.7027 0.70270235 303 O43172 PRPF4 U4/U6 small nuclear ribonucleoprotein Prp4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.312 81.372 2 0.005998 94130 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 68.847 51.616 199260000 0 0 0 4948500 9043000 12711000 10895000 14582000 12751000 19588000 21335000 22214000 13944000 17709000 39535000 37576 303 33533 312829;312830;312831;312832;312833;312834;312835;312836;312837;312838;312839;312840 247573;247574;247575;247576 247573 4 NILSVVGTDALKK Unmodified 1356.7977 0.79766537 303 O43172 PRPF4 U4/U6 small nuclear ribonucleoprotein Prp4 yes yes 0 0 1 By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 74.343 74.368 3 0.0010507 85671 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 50.207 26.981 37999000 0 0 0 2822700 2003500 2268500 3739900 5656800 0 4581200 4654000 5143800 4222800 2905500 0 37577 303 33534 312841;312842;312843;312844;312845;312846;312847;312848;312849;312850 247577;247578;247579 247579 3 NILTAQLQEMK Oxidation (M) 1303.6806 0.6805867 3665 Q92805 GOLGA1 Golgin subfamily A member 1 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 6.57 3.96 3 4 1 1 1 1 1 1 1 62.689 60.1 2 0.014367 80444 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.56 22.538 70709000 11075000 45145000 1573500 0 3848000 3070500 0 0 2595300 0 0 0 3402700 0 0 37578 3665 33535 312851;312852;312853;312854;312855;312856;312857 247580;247581 247580 5202 2 NILTEIYR Unmodified 1020.5604 0.56039521 2593 Q15907 RAB11B Ras-related protein Rab-11B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 75.855 75.954 2 0.00018767 87517 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 154.01 113.91 412120000 0 0 0 11396000 0 39504000 24666000 33665000 21803000 41778000 50591000 49259000 37990000 27590000 73882000 37579 2593 33536 312858;312859;312860;312861;312862;312863;312864;312865;312866;312867;312868 247582;247583;247584;247585;247586;247587;247588;247589;247590;247591 247584 10 NILTSNNIDVK Unmodified 1229.6616 0.66156582 795 P05090 APOD Apolipoprotein D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 58.798 57.77 2 2.6642E-05 66514 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 120.27 59.591 277180000 0 60141000 0 77132000 31250000 0 0 33618000 0 0 0 51441000 0 23595000 0 37580 795 33537 312869;312870;312871;312872;312873;312874 247592;247593;247594;247595;247596;247597;247598;247599;247600;247601 247599 10 NILTSNNIDVKK Unmodified 1357.7565 0.75652884 795 P05090 APOD Apolipoprotein D yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 7 1 1 1 1 1 1 1 45.777 45.761 3 0.0023263 52165 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 66.326 55.328 55425000 0 0 0 17846000 5518900 0 4807300 7594500 0 9868800 0 0 7606400 2183100 0 37581 795 33538 312875;312876;312877;312878;312879;312880;312881 247602 247602 0 NILVFGEDGSGK Unmodified 1234.6194 0.61936665 306 O43237 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 69.408 68.338 2 2.3619E-05 78432 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 91.584 47.137 124900000 13272000 7520900 4355800 7674100 7071000 7941200 8134000 9161800 6830000 6810900 16580000 17839000 0 11708000 0 37582 306 33539 312882;312883;312884;312885;312886;312887;312888;312889;312890;312891;312892;312893;312894;312895 247603;247604;247605;247606;247607;247608;247609;247610;247611;247612;247613;247614;247615;247616;247617 247610 13 NILVHSLNK Unmodified 1036.6029 0.60292873 17 A3KN83 SBNO1 Protein strawberry notch homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 38.058 37.345 2 0.009035 40960 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 67.897 36.668 119570000 24673000 0 2540800 5315900 5229800 11507000 8139200 6916500 5348200 10547000 9643900 13413000 8553200 7740200 0 37583 17 33540 312896;312897;312898;312899;312900;312901;312902;312903;312904;312905;312906;312907;312908 247618;247619;247620;247621;247622;247623;247624;247625;247626 247620 9 NILYHAVK Unmodified 956.54435 0.54435122 2561 Q15652 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.083 28.278 2 0.027236 30318 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 57.471 0 277720000 0 0 0 10035000 10965000 15502000 16678000 24648000 15001000 27829000 35847000 26558000 30445000 25378000 38837000 37584 2561 33541 312909;312910;312911;312912;312913;312914;312915;312916;312917;312918;312919;312920 247627;247628;247629 247628 3 NINADEAAAMGAVYQAAALSK Oxidation (M) 2094.0052 0.0051683175 5206 Q9Y4L1 HYOU1 Hypoxia up-regulated protein 1 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 82.893 78.897 2 4.0817E-09 98180 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.988 72.309 55347000 0 55347000 0 0 0 0 0 0 0 0 0 0 0 0 0 37585 5206 33542 312921;312922 247630 247630 6606 1 NINADEAAAMGAVYQAAALSK Unmodified 2078.0103 0.010253695 5206 Q9Y4L1 HYOU1 Hypoxia up-regulated protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2.2 0.4 4 1 3 2 91.913 88.316 2;3 4.4475E-48 109624 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.82 125.98 690260000 0 679770000 10496000 0 0 0 0 0 0 0 0 0 0 0 0 37586 5206 33542 312923;312924;312925;312926;312927 247631;247632;247633;247634;247635 247631 4 NINDAWVCTNDMFR Oxidation (M) 1770.7454 0.74538858 1867 P61970 NUTF2 Nuclear transport factor 2 yes yes 0 1 0 By MS/MS 10 0 1 1 73.363 73.733 2 3.4292E-05 84434 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.479 75.525 7333300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7333300 37587 1867 33543 312928 247636 247636 3018 1 NINDAWVCTNDMFR Unmodified 1754.7505 0.75047396 1867 P61970 NUTF2 Nuclear transport factor 2 yes yes 0 0 0 By MS/MS 10 0 1 1 82.486 82.688 2 0.00046436 95372 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.718 74.666 5837000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5837000 37588 1867 33543 312929 247637 247637 1 NINGITQHK Unmodified 1023.5461 0.54614213 4230 Q9BXP5 SRRT Serrate RNA effector molecule homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.686 13.849 2 0.0043999 13325 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 86.953 16.686 104090000 0 0 0 4942900 4732900 5560800 8146600 6485200 5196700 9041300 9599500 11655000 9244900 9349600 20135000 37589 4230 33544 312930;312931;312932;312933;312934;312935;312936;312937;312938;312939;312940;312941 247638;247639;247640;247641;247642;247643;247644;247645;247646;247647;247648;247649;247650 247647 13 NINIGDISIK Unmodified 1085.6081 0.60807369 3628 Q92572 AP3S1 AP-3 complex subunit sigma-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 77.562 77.668 2 0.019804 89978 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 47.603 12.308 195300000 0 0 0 0 10393000 12576000 12355000 14976000 13215000 21707000 23777000 21110000 16745000 15769000 32680000 37590 3628 33545 312942;312943;312944;312945;312946;312947;312948;312949;312950;312951;312952 247651;247652 247652 2 NINIGDLNIK Unmodified 1112.619 0.61897272 1805 P59780 AP3S2 AP-3 complex subunit sigma-2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 76.137 76.136 2 0.0017421 87749 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 88.948 53.068 52375000 0 0 0 2832200 3340600 4857200 4824700 7661100 5662500 9440600 0 0 5578000 8178500 0 37591 1805 33546 312953;312954;312955;312956;312957;312958;312959;312960;312961 247653;247654;247655;247656;247657;247658;247659;247660 247655 6 NINLIVQK Unmodified 940.57057 0.57056597 2178;1937 P63010;Q10567 AP2B1;AP1B1 AP-2 complex subunit beta;AP-1 complex subunit beta-1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 53.431 53.572 2 0.012535 60582 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 74.415 41.945 463110000 0 0 0 22767000 24376000 45708000 33060000 21210000 18158000 51582000 45939000 47255000 31987000 47477000 73588000 37592 1937;2178 33547 312962;312963;312964;312965;312966;312967;312968;312969;312970;312971;312972;312973 247661;247662;247663;247664;247665;247666;247667;247668;247669;247670;247671;247672;247673 247661 13 NINLPEIPR Unmodified 1064.5978 0.59784335 1805 P59780 AP3S2 AP-3 complex subunit sigma-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 75.051 75.078 2 0.022691 86731 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 78.77 52.876 57696000 0 0 0 5384100 0 9215700 0 8842300 6573900 0 0 0 0 0 27680000 37593 1805 33548 312974;312975;312976;312977;312978;312979 247674;247675 247675 2 NINPSTANSPK Unmodified 1141.5728 0.57275081 1516 P46937 YAP1 Transcriptional coactivator YAP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 16.898 17.106 2 0.00066247 16591 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 78.098 63.431 73512000 0 0 0 0 3069900 2627400 4096900 3734200 2827100 4305500 7989200 13438000 5532900 6605100 19286000 37594 1516 33549 312980;312981;312982;312983;312984;312985;312986;312987;312988;312989;312990 247676;247677;247678;247679;247680;247681;247682;247683;247684 247683 9 NINSLQEELLQLK Unmodified 1540.8461 0.84607213 3242 Q8IWJ2 GCC2 GRIP and coiled-coil domain-containing protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 93.138 88.228 2 4.194E-22 109524 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 177.78 142.55 42885000 0 42885000 0 0 0 0 0 0 0 0 0 0 0 0 0 37595 3242 33550 312991 247685 247685 1 NINTFVETPVQK Unmodified 1388.73 0.72997974 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 62.809 62.445 2 0.00010418 71318 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 105.98 54.909 121000000 0 48446000 0 3769900 4217600 4322900 5876800 3789100 3465800 5544900 7872600 11008000 5055700 5503500 12131000 37596 1492 33551 312992;312993;312994;312995;312996;312997;312998;312999;313000;313001;313002;313003;313004 247686;247687;247688;247689;247690;247691;247692;247693;247694;247695;247696 247687 9 NIPEDNADMAR Oxidation (M) 1260.5405 0.54046441 1307 P31939 ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 19.883 20.402 2 0.012489 19507 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.308 27.105 17745000 0 0 0 0 0 0 0 0 0 0 0 3131000 0 3043000 11571000 37597 1307 33552 313005;313006;313007 247697 247697 1931 1 NIPEDNADMAR Unmodified 1244.5455 0.54554978 1307 P31939 ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 30.664 31.25 2 0.014114 33613 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 45.161 38.522 18116000 0 0 0 0 0 0 0 0 0 0 5179600 0 0 0 12937000 37598 1307 33552 313008;313009 247698;247699 247698 2 NIPEGSHQYELLK Unmodified 1526.7729 0.77290718 3060 Q9H8S9;Q7L9L4 MOB1A;MOB1B MOB kinase activator 1A;MOB kinase activator 1B yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.33 3.77 5 10 1 2 2 1 1 1 1 1 1 1 1 1 1 54.612 52.793 2;3 0.0024438 59838 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 43.405 35.429 542360000 13430000 195370000 121310000 10433000 9575600 34291000 19598000 16233000 14716000 34276000 27784000 0 21389000 23961000 0 37599 3060 33553 313010;313011;313012;313013;313014;313015;313016;313017;313018;313019;313020;313021;313022;313023;313024 247700;247701;247702;247703;247704;247705;247706;247707 247706 5 NIPETLELSAEAK Unmodified 1413.7351 0.73512469 3823 Q96EV2 RBM33 RNA-binding protein 33 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 70.994 71.058 2 0.0061613 81732 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 60.255 29.691 97980000 0 0 0 4285600 7669600 7535200 8055500 0 5672500 9487200 10363000 11778000 9857600 9808100 13468000 37600 3823 33554 313025;313026;313027;313028;313029;313030;313031;313032;313033;313034;313035 247708;247709;247710;247711;247712;247713;247714;247715;247716;247717;247718 247708 8 NIPGITLLNVSK Unmodified 1267.75 0.7499869 1377 P36578 RPL4 60S ribosomal protein L4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 84.132 84.197 2 2.1817E-05 96523 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 103.34 81.256 589890000 0 0 0 15694000 32255000 48295000 40447000 47682000 35287000 66952000 46246000 77983000 51535000 50027000 77482000 37601 1377 33555 313036;313037;313038;313039;313040;313041;313042;313043;313044;313045;313046;313047 247719;247720;247721;247722;247723;247724;247725;247726;247727;247728;247729;247730;247731;247732;247733 247726 15 NIPGPHMVLVPK Unmodified 1300.7326 0.73256269 389 O60264;P28370 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 66.115 66.192 3 0.020235 75015 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 29.299 23.005 49838000 0 0 0 3787200 2508100 4154100 2494800 3454200 0 2941500 7050600 6599400 3842000 3625700 9380200 37602 389 33556 313048;313049;313050;313051;313052;313053;313054;313055;313056;313057;313058 247734 247734 1 NIPHEAFVYQK Unmodified 1344.6826 0.68263561 4666 Q9NVE7 PANK4 Pantothenate kinase 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.61 3.03 4 19 2 2 2 3 2 2 1 2 2 1 1 1 1 1 49.778 48.755 2;3 1.8172E-15 54718 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 161.67 114.07 1573500000 105850000 0 64412000 270050000 435500000 532680000 22591000 26013000 29041000 22249000 19247000 22444000 4622000 4111000 14728000 37603 4666 33557 313059;313060;313061;313062;313063;313064;313065;313066;313067;313068;313069;313070;313071;313072;313073;313074;313075;313076;313077;313078;313079;313080;313081 247735;247736;247737;247738;247739;247740;247741;247742;247743;247744;247745;247746;247747;247748;247749;247750;247751;247752;247753 247735 17 NIPIPTLK Unmodified 894.55385 0.55385327 4746 Q9NYL9 TMOD3 Tropomodulin-3 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.295 73.361 2 0.044838 84881 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 48.756 28.057 575840000 0 0 0 33647000 38919000 48741000 37510000 37046000 35409000 55299000 60261000 73004000 49811000 44490000 61703000 37604 4746 33558 313082;313083;313084;313085;313086;313087;313088;313089;313090;313091;313092;313093 247754;247755 247755 2 NIPMSVNDIVKPGMR 2 Oxidation (M) 1701.8542 0.85421075 4868 Q9UDY4 DNAJB4 DnaJ homolog subfamily B member 4 yes yes 0 2 1 By matching By matching By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 60.157 60.512 3 0.0013246 68257 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 45.864 39.427 31606000 0 0 0 0 0 0 4454900 0 0 0 5829300 4824900 0 6812500 9684800 37605 4868 33559 313094;313095;313096;313097;313098 247756 247756 6218;6219 1 NIPMTLELLQSTR Oxidation (M) 1530.8076 0.80757813 1149 P23193 TCEA1 Transcription elongation factor A protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 83.465 83.5 2 0.00025016 96310 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.763 55.378 40657000 0 0 0 1098100 2398500 3202000 3696300 5096200 4427800 6598400 0 0 4474800 0 9665400 37606 1149 33560 313099;313100;313101;313102;313103;313104;313105;313106;313107;313108;313109;313110 247757;247758;247759;247760;247761;247762;247763;247764;247765;247766 247759 1648 10 NIPMTLELLQSTR Unmodified 1514.8127 0.81266351 1149 P23193 TCEA1 Transcription elongation factor A protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 88.094 88.244 2 0.0040346 102054 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.286 34.713 5147200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5147200 37607 1149 33560 313111 247767 247767 1 NIPPYFVALVPQEEELDDQK Unmodified 2343.1634 0.1634431 973 P12956 XRCC6 X-ray repair cross-complementing protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 93.271 93.409 3 2.0595E-05 108653 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 58.024 47.186 35100000 0 0 0 0 0 1315000 928190 2403400 1798800 12036000 8575800 5558300 0 2484300 0 37608 973 33561 313112;313113;313114;313115;313116;313117;313118;313119 247768;247769;247770;247771;247772 247770 5 NIPQSTEILK Unmodified 1141.6343 0.63428844 663 O95456 PSMG1 Proteasome assembly chaperone 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53.976 52.856 2 0.016439 58517 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.536 24.717 1069300000 14313000 801690000 4929600 8518300 0 26968000 11252000 8808700 10726000 21700000 28841000 28455000 23224000 16642000 63278000 37609 663 33562 313120;313121;313122;313123;313124;313125;313126;313127;313128;313129;313130;313131;313132;313133 247773;247774;247775 247773 3 NIPQSTEILKK Unmodified 1269.7293 0.72925145 663 O95456 PSMG1 Proteasome assembly chaperone 1 yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 47.308 42.944 3 0.03568 53505 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 32.999 15.832 16558000 0 8715500 7842200 0 0 0 0 0 0 0 0 0 0 0 0 37610 663 33563 313134;313135 247776;247777 247776 0 NIPSIFNTPEPTTTQEPLVGSQK Unmodified 2497.27 0.27003343 3598 Q8WY36 BBX HMG box transcription factor BBX yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 84.552 84.618 3 1.3199E-13 97824 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.627 49.271 156610000 0 0 0 4560000 12554000 16168000 11563000 16139000 10309000 21810000 10614000 13185000 8625700 10276000 20810000 37611 3598 33564 313136;313137;313138;313139;313140;313141;313142;313143;313144;313145;313146;313147 247778;247779;247780;247781;247782;247783;247784;247785;247786;247787;247788;247789;247790;247791 247783 14 NIPSPGQLDPDTRIPVINLEDGTR Unmodified 2616.3507 0.35074337 4814 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 0 0 1 By MS/MS 10 0 1 1 85.87 86.038 3 3.0937E-06 99489 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.395 38.364 4052800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4052800 37612 4814 33565 313148 247792 247792 1 NIQATLHQK Unmodified 1051.5774 0.57744226 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20.394 19.707 2 0.0051444 19571 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 82.241 10.945 657930000 412160000 108780000 85499000 0 1765300 3542300 1982500 2272600 1705100 4506800 6970400 7219000 3130000 5985200 12406000 37613 2495 33566 313149;313150;313151;313152;313153;313154;313155;313156;313157;313158;313159;313160;313161;313162 247793;247794;247795;247796;247797;247798 247797 4 NIQDSVPK Unmodified 899.47125 0.47124585 154 O00429 DNM1L Dynamin-1-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.975 27.173 2 0.0085533 28972 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 85.813 59.59 436600000 0 0 0 26106000 26723000 46941000 31254000 29847000 17601000 46776000 42016000 40482000 37936000 38949000 51968000 37614 154 33567 313163;313164;313165;313166;313167;313168;313169;313170;313171;313172;313173;313174 247799;247800;247801;247802;247803;247804;247805 247800 7 NIQDTSDLDAIAK Unmodified 1402.694 0.69398816 4762 Q9NZB2 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 58.237 58.359 2 1.197E-12 67316 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 126.71 73.991 97131000 0 0 0 7049200 5652300 0 7746100 7638500 5623000 9669100 9397600 9963200 11514000 10358000 12521000 37615 4762 33568 313175;313176;313177;313178;313179;313180;313181;313182;313183;313184;313185 247806;247807;247808;247809;247810;247811;247812;247813;247814;247815;247816;247817;247818 247817 12 NIQFAHANKPK Unmodified 1266.6833 0.68330431 2397 Q14241 TCEB3 Transcription elongation factor B polypeptide 3 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 18.541 18.862 3 0.0020604 17777 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.82 48.442 79089000 0 0 0 12476000 0 0 0 0 0 0 0 18570000 17693000 11114000 19235000 37616 2397 33569 313186;313187;313188;313189;313190 247819;247820;247821;247822 247819 4 NIQVSHQEFSK Unmodified 1315.6521 0.65206377 3549 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8 3.4 6 2 23 2 4 2 2 1 2 2 2 2 2 2 2 2 2 2 31.174 30.101 2;3 2.7048E-08 42630 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 126.71 114.48 1833600000 574310000 418070000 392560000 25483000 9130000 48961000 27653000 22789000 20729000 39102000 48580000 37324000 48767000 50871000 69259000 37617 3549 33570 313191;313192;313193;313194;313195;313196;313197;313198;313199;313200;313201;313202;313203;313204;313205;313206;313207;313208;313209;313210;313211;313212;313213;313214;313215;313216;313217;313218;313219;313220;313221 247823;247824;247825;247826;247827;247828;247829;247830;247831;247832;247833;247834;247835;247836;247837;247838;247839;247840;247841;247842;247843;247844;247845;247846 247835 19 NIREFEEEK Unmodified 1192.5724 0.57241646 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.657 26.857 3 0.014748 28688 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 45.161 27.994 272120000 0 0 0 18235000 10993000 27708000 16575000 19496000 13635000 27501000 26708000 29999000 29098000 28163000 24004000 37618 2431 33571 313222;313223;313224;313225;313226;313227;313228;313229;313230;313231;313232;313233 247847;247848;247849;247850;247851;247852 247852 3 NISAFPMLPK Unmodified 1116.6002 0.60015154 5292 Q9Y6Q9 NCOA3 Nuclear receptor coactivator 3 yes yes 0 0 0 By MS/MS 2 0 1 1 86.936 78.805 2 0.039528 102711 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.999 39.312 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37619 5292 33572 313234 247853 247853 1 NISEAFEDLSK Unmodified 1251.5983 0.59829686 3168 Q86VN1 VPS36 Vacuolar protein-sorting-associated protein 36 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 77.979 72.727 2 0.0073765 88559 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 82.749 64.764 141400000 25415000 111760000 4221300 0 0 0 0 0 0 0 0 0 0 0 0 37620 3168 33573 313235;313236;313237 247854;247855 247855 2 NISFGRDQDNK Unmodified 1292.6109 0.61092723 426 O60716 CTNND1 Catenin delta-1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24.187 23.742 3 0.019827 24565 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 31.185 8.8569 243530000 99752000 0 14244000 7177500 7612900 9000300 9906000 8344700 8039500 15895000 8953300 14394000 12423000 12646000 15145000 37621 426 33574 313238;313239;313240;313241;313242;313243;313244;313245;313246;313247;313248;313249;313250;313251 247856;247857 247857 2 NISFNDK Unmodified 836.40283 0.40283194 1198;1017;1345 P26038;P35241;P15311 MSN;RDX;EZR Moesin;Radixin;Ezrin no no 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 27.744 27.879 2 0.032553 28574 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 72.789 35.695 303120000 0 0 0 20418000 10310000 17322000 16365000 13487000 9419400 20269000 63982000 71023000 0 60528000 0 37622 1198;1345;1017 33575 313252;313253;313254;313255;313256;313257;313258;313259;313260;313261 247858;247859 247859 2 NISFTVWDVGGQDK Unmodified 1564.7522 0.75217174 2011 P84077;P61204 ARF1;ARF3 ADP-ribosylation factor 1;ADP-ribosylation factor 3 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.53 2.94 1 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 84.517 83.574 2;3 8.3449E-27 97645 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 156.02 112.71 359400000 8472200 17237000 0 8962500 12857000 28786000 16393000 27233000 24303000 36107000 30153000 31673000 13615000 24814000 78790000 37623 2011 33576 313262;313263;313264;313265;313266;313267;313268;313269;313270;313271;313272;313273;313274;313275;313276 247860;247861;247862;247863;247864;247865;247866;247867;247868;247869;247870;247871;247872;247873;247874;247875;247876;247877;247878;247879 247871 20 NISGETPEGIK Unmodified 1143.5772 0.57716749 3598 Q8WY36 BBX HMG box transcription factor BBX yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 33.626 33.866 2 0.0098603 37285 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 50.108 33.634 130220000 0 0 0 0 9277700 9279100 8252500 10277000 7094400 12358000 16912000 15655000 16828000 9899200 14384000 37624 3598 33577 313277;313278;313279;313280;313281;313282;313283;313284;313285;313286;313287 247880;247881 247881 2 NISLHGDGPLR Unmodified 1177.6204 0.62036971 3296 Q8IZL8 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 44.099 44.447 3 0.0027775 48945 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 51.841 39.21 64847000 0 0 0 0 0 9237100 0 0 0 0 0 0 14862000 15579000 25169000 37625 3296 33578 313288;313289;313290;313291 247882;247883 247882 1 NISQCMTPDQLMTLCK Oxidation (M) 1954.8621 0.86207459 3100 Q7Z4Q2 HEATR3 HEAT repeat-containing protein 3 yes yes 0 1 0 By MS/MS 2 0 1 1 76.171 71.333 2 0.00097468 89095 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.187 47.631 29314000 0 29314000 0 0 0 0 0 0 0 0 0 0 0 0 0 37626 3100 33579 313292 247884 247884 4710 1 NISQCMTPDQLMTLCK Unmodified 1938.8672 0.86715997 3100 Q7Z4Q2 HEATR3 HEAT repeat-containing protein 3 yes yes 0 0 0 By MS/MS 2 0 1 1 84.422 79.678 2 1.7888E-45 99023 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 192.15 168.54 120880000 0 120880000 0 0 0 0 0 0 0 0 0 0 0 0 0 37627 3100 33579 313293 247885 247885 1 NISSAQIVGPGPKPEASAK Unmodified 1849.9898 0.98977625 1728 P53990 IST1 IST1 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 47.088 45.8 3 0.00013344 60400 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 56.529 45.267 249520000 29982000 50731000 11508000 10045000 8050400 12667000 12445000 12893000 8103200 17381000 17461000 18379000 12906000 10417000 16549000 37628 1728 33580 313294;313295;313296;313297;313298;313299;313300;313301;313302;313303;313304;313305;313306;313307;313308;313309 247886;247887;247888;247889;247890;247891;247892;247893;247894;247895;247896;247897;247898 247888 13 NISSSPSVESLPGGREFTGSPPSSATK Unmodified 2675.3039 0.30385276 3636 Q92609 TBC1D5 TBC1 domain family member 5 yes yes 0 0 1 By MS/MS 2 0 1 1 70.929 67.354 3 8.1098E-06 82995 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 40.669 26.261 5528100 0 0 5528100 0 0 0 0 0 0 0 0 0 0 0 0 37629 3636 33581 313310 247899 247899 1 NITDYLIEEVSAEEEELLGSSGGAPPEEPPK Unmodified 3298.5616 0.56164317 4230 Q9BXP5 SRRT Serrate RNA effector molecule homolog yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 1 2 102.09 96.235 3;4 1.2376E-35 120555 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.276 71.956 88094000 11248000 76846000 0 0 0 0 0 0 0 0 0 0 0 0 0 37630 4230 33582 313311;313312;313313 247900;247901;247902 247901 2 NITGTDDQVQQAMNSLK Unmodified 1861.884 0.88399055 3950 Q96PZ0 PUS7 Pseudouridylate synthase 7 homolog yes yes 0 0 0 By MS/MS 10 0 1 1 74.068 74.169 2 0.020742 85498 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 50.897 38.266 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37631 3950 33583 313314 247903 247903 1 NITLDDASAPR Unmodified 1171.5833 0.5833155 517 O75534 CSDE1 Cold shock domain-containing protein E1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.009 45.18 2 0.0003091 50680 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 111.61 85.87 272570000 0 0 0 12110000 8568800 14502000 17225000 13033000 10476000 17901000 36969000 35025000 20439000 25820000 60503000 37632 517 33584 313315;313316;313317;313318;313319;313320;313321;313322;313323;313324;313325;313326 247904;247905;247906;247907;247908;247909;247910;247911;247912;247913;247914;247915;247916 247905 13 NITNDIRTK Unmodified 1073.5829 0.58292157 2189 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 28.212 23.885 2 0.0050288 33609 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 136.99 61.775 79214000 48616000 17481000 13116000 0 0 0 0 0 0 0 0 0 0 0 0 37633 2189 33585 313327;313328;313329 247917;247918 247917 0 NITNELLRIEPEK Unmodified 1567.857 0.85697116 399 O60437 PPL Periplakin yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 80.624 76.985 3 0.03449 93471 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 45.915 24.962 23280000 0 17136000 6143900 0 0 0 0 0 0 0 0 0 0 0 0 37634 399 33586 313330;313331 247919 247919 1 NITNSQAPDGR Unmodified 1171.5582 0.55816338 1276 P30305 CDC25B M-phase inducer phosphatase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 14.777 15.249 2 0.00039146 13897 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.898 51.542 20178000 0 0 0 0 0 0 0 0 0 0 0 10064000 0 0 10114000 37635 1276 33587 313332;313333;313334;313335 247920;247921;247922;247923 247921 4 NITQLSYQSHMALK Unmodified 1632.8294 0.8293762 1316 P32019 INPP5B Type II inositol 1,4,5-trisphosphate 5-phosphatase yes yes 0 0 0 By MS/MS 2 0 1 1 71.32 63.054 3 0.022092 83856 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 33.265 14.443 6288500 6288500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37636 1316 33588 313336 247924 247924 1 NITTVVEK Unmodified 902.5073 0.50729701 3471 Q8TAG9 EXOC6 Exocyst complex component 6 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 31.226 31.427 2 0.047929 32922 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.657 10.498 31540000 0 0 0 0 2505900 4365100 2957900 3542300 2283200 2851700 0 5496800 0 3234300 4302700 37637 3471 33589 313337;313338;313339;313340;313341;313342;313343;313344;313345 247925 247925 1 NITVREEEK Unmodified 1116.5775 0.57750184 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 17.642 14.126 2 0.0032073 17589 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 148.69 84.483 229330000 6488200 67635000 155200000 0 0 0 0 0 0 0 0 0 0 0 0 37638 528 33590 313346;313347;313348;313349 247926;247927;247928;247929;247930;247931 247930 6 NIVDHTNEQQK Unmodified 1324.6371 0.63714198 247 O15066 KIF3B Kinesin-like protein KIF3B;Kinesin-like protein KIF3B, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 12.236 9.2427 3 0.0035146 11716 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 54.471 41.894 29183000 0 28187000 995320 0 0 0 0 0 0 0 0 0 0 0 0 37639 247 33591 313350;313351;313352 247932;247933 247933 2 NIVEAAAVR Unmodified 941.52943 0.52942943 1918 P62854;Q5JNZ5 RPS26;RPS26P11 40S ribosomal protein S26;Putative 40S ribosomal protein S26-like 1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.223 39.402 2 0.0034132 44755 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 105.57 25.971 1732100000 0 0 0 98430000 117470000 120660000 124560000 99377000 91591000 157550000 172700000 205990000 171560000 148750000 223420000 37640 1918 33592 313353;313354;313355;313356;313357;313358;313359;313360;313361;313362;313363;313364 247934;247935;247936;247937;247938;247939;247940;247941;247942;247943;247944;247945;247946;247947;247948 247947 15 NIVHNYSEAEIK Unmodified 1415.7045 0.70449327 5284 Q9Y6I3;Q9H201 EPN1;EPN3 Epsin-1;Epsin-3 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching 7.33 3.77 4 8 1 1 2 1 1 1 1 1 1 1 1 41.124 39.444 2;3 3.1291E-14 53749 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 149.96 120.15 121260000 9839200 13826000 59558000 3484700 1960900 3956800 0 0 3359100 7649500 7072200 0 5458300 5091200 0 37641 5284 33593 313365;313366;313367;313368;313369;313370;313371;313372;313373;313374;313375;313376 247949;247950;247951;247952;247953 247949 5 NIVPGWLQR Unmodified 1081.6033 0.60326308 1600 P49790 NUP153 Nuclear pore complex protein Nup153 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 77.047 77.109 2 0.033715 88504 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.813 22.841 28616000 0 0 0 1191200 0 4082300 2258200 0 3107100 0 4775600 0 2452600 0 10749000 37642 1600 33594 313377;313378;313379;313380;313381;313382;313383 247954 247954 1 NIVVDDITEQKPEPQDDGK Unmodified 2139.0332 0.033157207 5211 Q9Y4W2 LAS1L Ribosomal biogenesis protein LAS1L yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.56 3 2 1 13 1 2 1 1 1 1 2 1 1 1 1 1 1 1 59.22 57.951 3 1.1279E-42 65803 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 97.32 88.719 315740000 11262000 53437000 0 8811300 12161000 22196000 17465000 0 13824000 18823000 23490000 30972000 36376000 21605000 45313000 37643 5211 33595 313384;313385;313386;313387;313388;313389;313390;313391;313392;313393;313394;313395;313396;313397;313398;313399 247955;247956;247957;247958;247959;247960;247961;247962;247963;247964;247965;247966;247967;247968;247969;247970;247971;247972;247973 247971 19 NIVVIDDDK Unmodified 1029.5342 0.53424004 2567 Q15723 ELF2 ETS-related transcription factor Elf-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 44.401 44.565 2 0.004955 50460 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 85.161 51.364 70104000 0 0 0 7003100 0 13592000 0 0 9855000 0 0 0 13328000 11344000 14982000 37644 2567 33596 313400;313401;313402;313403;313404;313405;313406;313407;313408;313409 247974;247975;247976;247977;247978;247979;247980;247981;247982;247983;247984 247974 11 NIVVIDDDKSETCNEDLAGTTDEK Unmodified 2680.2021 0.20214938 2567 Q15723 ELF2 ETS-related transcription factor Elf-2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 59.531 59.666 3 9.7892E-18 67978 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 82.593 75.233 27187000 0 0 0 0 4801300 0 4346300 4898200 0 0 6698500 6442900 0 0 0 37645 2567 33597 313410;313411;313412;313413;313414 247985;247986;247987;247988;247989 247988 5 NIWVSGLSSNTK Unmodified 1304.6725 0.67246486 4697 Q9NWH9 SLTM SAFB-like transcription modulator yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 65.319 65.341 2 0.0056028 74898 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 64.439 45.659 21297000 0 0 0 0 4181300 0 6480600 0 0 0 0 10635000 0 0 0 37646 4697 33598 313415;313416;313417;313418;313419 247990;247991;247992;247993;247994 247990 5 NIYAFMGTPVQK Oxidation (M) 1383.6857 0.68567208 1492 P46013 MKI67 Antigen KI-67 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 61.393 61.108 2 0.00033276 69621 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 78.655 69.697 3701600 0 0 0 1549900 0 0 2151700 0 0 0 0 0 0 0 0 37647 1492 33599 313420;313421;313422;313423 247995;247996;247997 247995 2346 3 NIYSEELRETK Unmodified 1380.6885 0.68850885 757 P02545 LMNA Prelamin-A/C;Lamin-A/C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.62 8 3 23 4 4 3 2 2 1 2 2 2 2 2 2 2 2 2 40.394 38.833 2;3 3.0979E-21 41696 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 185.96 157.23 3916300000 660180000 1063900000 1102000000 74189000 36436000 16954000 44861000 56596000 51399000 78035000 164340000 148930000 85687000 93149000 239640000 37648 757 33600 313424;313425;313426;313427;313428;313429;313430;313431;313432;313433;313434;313435;313436;313437;313438;313439;313440;313441;313442;313443;313444;313445;313446;313447;313448;313449;313450;313451;313452;313453;313454;313455;313456;313457 247998;247999;248000;248001;248002;248003;248004;248005;248006;248007;248008;248009;248010;248011;248012;248013;248014;248015;248016;248017;248018;248019;248020;248021 248004 20 NIYVLQELDNPGAK Unmodified 1572.8148 0.814772 973 P12956 XRCC6 X-ray repair cross-complementing protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.39 5 2 20 3 3 1 2 2 1 1 2 2 1 1 2 2 2 2 81.725 80.759 2;3 1.7323E-100 93334 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 201.48 165.97 2658400000 82612000 1481900000 51990000 22556000 46167000 72280000 64497000 65633000 75778000 98537000 107040000 125610000 60207000 89548000 214010000 37649 973 33601 313458;313459;313460;313461;313462;313463;313464;313465;313466;313467;313468;313469;313470;313471;313472;313473;313474;313475;313476;313477;313478;313479;313480;313481;313482;313483;313484 248022;248023;248024;248025;248026;248027;248028;248029;248030;248031;248032;248033;248034;248035;248036;248037;248038;248039;248040;248041 248024 19 NIYYLCAPNR Unmodified 1282.6128 0.61284149 2210 Q12931 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 60.527 60.809 2 0.0076455 69583 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 61.962 49.435 26472000 0 0 0 0 0 2773400 0 0 2314100 3705100 3482300 5102100 3759600 0 5334900 37650 2210 33602 313485;313486;313487;313488;313489;313490;313491 248042;248043;248044 248044 3 NKDDELTGF Unmodified 1037.4666 0.46655441 742 P01040 CSTA Cystatin-A;Cystatin-A, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 47.612 47.32 2 8.4948E-05 53535 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 145.34 134.71 1992000000 0 76817000 0 702080000 116850000 67069000 108430000 139640000 49455000 115300000 138410000 176480000 100670000 78203000 122580000 37651 742 33603 313492;313493;313494;313495;313496;313497;313498;313499;313500;313501;313502;313503;313504 248045;248046;248047;248048;248049;248050;248051;248052;248053 248049 1 NKEDQYDHLDAADMTK Unmodified 1892.8211 0.82105594 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.57 3.96 3 4 1 1 1 1 1 1 1 42.412 40.313 3 4.3088E-21 43830 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 116.06 110.63 204550000 52555000 69121000 13724000 0 0 0 0 0 0 0 15238000 13665000 0 8121600 32125000 37652 1337 33604 313505;313506;313507;313508;313509;313510;313511 248054;248055;248056;248057;248058;248059;248060;248061;248062 248057 9 NKEDQYDHLDAADMTK Oxidation (M) 1908.816 0.81597056 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 28.808 27.181 3 7.0743E-05 28368 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.354 66.873 44461000 22100000 0 0 0 0 0 0 0 0 0 10064000 0 0 0 12296000 37653 1337 33604 313512;313513;313514 248063;248064;248065 248064 2014 3 NKEEAAEYAK Unmodified 1151.5459 0.54586736 1909 P62753 RPS6 40S ribosomal protein S6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 9.08 2.56 3 23 1 1 1 1 2 2 2 2 2 2 2 2 2 2 2 8.082 7.8431 2;3 8.8096E-22 6393 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 172.98 127.01 351030000 15931000 76677000 1292200 7549800 11909000 4451500 12896000 11682000 7521600 24073000 66061000 52535000 22753000 19209000 16487000 37654 1909 33605 313515;313516;313517;313518;313519;313520;313521;313522;313523;313524;313525;313526;313527;313528;313529;313530;313531;313532;313533;313534;313535;313536;313537;313538;313539;313540 248066;248067;248068;248069;248070;248071 248069 4 NKFDVDAADEK Unmodified 1250.5779 0.57789577 4323 Q9H0D6 XRN2 5'-3' exoribonuclease 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 26.818 26.242 2;3 0.0092644 33979 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.08 75.953 90928000 13056000 8864300 0 0 6204200 3115600 7372300 6479000 2801100 8507400 7053800 8254700 6482500 5888800 6848000 37655 4323 33606 313541;313542;313543;313544;313545;313546;313547;313548;313549;313550;313551;313552;313553 248072;248073;248074 248072 2 NKHEAMITDLEER Unmodified 1584.7566 0.75660519 1356 P35579 MYH9 Myosin-9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 1 1 2 2 2 3 2 2 2 2 2 2 41.649 41.884 3;4 0.00017462 45412 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 82.55 71.288 447800000 0 0 0 8092300 4352200 20841000 14357000 23929000 23848000 19983000 37481000 115080000 38164000 28738000 112940000 37656 1356 33607 313554;313555;313556;313557;313558;313559;313560;313561;313562;313563;313564;313565;313566;313567;313568;313569;313570;313571;313572;313573;313574;313575;313576 248075;248076;248077;248078;248079;248080;248081;248082;248083;248084;248085;248086;248087 248085 11 NKHEAMITDLEER Oxidation (M) 1600.7515 0.75151981 1356 P35579 MYH9 Myosin-9 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 2 2 3 1 1 3 29.849 30.242 2;3 8.0529E-05 32675 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 82.925 63.601 480590000 0 0 0 0 0 17915000 28610000 30930000 49825000 0 0 194930000 39703000 42669000 76013000 37657 1356 33607 313577;313578;313579;313580;313581;313582;313583;313584;313585;313586;313587;313588;313589;313590 248088;248089;248090;248091;248092;248093;248094;248095;248096 248096 2077 7 NKHPDEDAVEAEGHEVK Unmodified 1902.8708 0.87078333 4736 Q9NY27 PPP4R2 Serine/threonine-protein phosphatase 4 regulatory subunit 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 25.274 21.204 4 0.020651 26947 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 26.548 16.589 40671000 23374000 0 17297000 0 0 0 0 0 0 0 0 0 0 0 0 37658 4736 33608 313591;313592 248097 248097 1 NKLEGLEDALQK Unmodified 1356.7249 0.72489436 66;58;779 P04259;CON__P02538;P02538;CON__P04259 KRT6B;KRT6A Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 6A no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 2 1 2 2 1 1 1 2 2 1 2 59.37 59.5 2;3 7.2036E-80 68173 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 221.6 163.16 + 472330000 0 0 0 65976000 7306900 0 36096000 46689000 3928800 10260000 9656500 52078000 205220000 17640000 17481000 37659 779;58;66 33609 313593;313594;313595;313596;313597;313598;313599;313600;313601;313602;313603;313604;313605;313606;313607;313608;313609 248098;248099;248100;248101;248102;248103;248104;248105;248106;248107;248108 248102 6 NKLNDLEDALQQAK Unmodified 1598.8264 0.82639932 780 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 72.866 72.916 2;3 3.2204E-148 83917 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 237.49 217.28 + 1282900000 0 0 0 47679000 48703000 46594000 26138000 287570000 50063000 112180000 69855000 404750000 102090000 51566000 35727000 37660 780 33610 313610;313611;313612;313613;313614;313615;313616;313617;313618;313619;313620;313621;313622;313623;313624;313625;313626;313627;313628;313629;313630;313631;313632;313633 248109;248110;248111;248112;248113;248114;248115;248116;248117;248118;248119;248120;248121;248122;248123;248124;248125;248126;248127;248128;248129;248130;248131;248132;248133;248134;248135 248133 25 NKLNDLEEALQQAK Unmodified 1612.842 0.84204938 79 CON__P35908v2;P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 0 1 By matching By MS/MS By matching By matching 10 0 4 1 1 1 1 75.817 75.868 3 0.0067024 87850 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 27.458 16.009 + 19140000 0 0 0 0 2619500 0 0 0 0 0 0 0 7783200 4574300 4162900 37661 79 33611 313634;313635;313636;313637 248136 248136 1 NKPGPNIESGNEDDDASFK Unmodified 2032.8974 0.89739201 437 O60841 EIF5B Eukaryotic translation initiation factor 5B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 38.914 37.551 2;3 5.0443E-64 48449 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 166.09 154.87 636660000 62611000 140260000 4954700 30702000 28060000 30963000 51793000 32289000 24205000 47743000 43767000 36091000 33175000 31282000 38756000 37662 437 33612 313638;313639;313640;313641;313642;313643;313644;313645;313646;313647;313648;313649;313650;313651;313652;313653;313654 248137;248138;248139;248140;248141;248142;248143;248144;248145;248146;248147;248148;248149;248150;248151;248152;248153;248154;248155;248156;248157 248142 21 NKPGPYSSVPPPSAPPPK Unmodified 1815.9519 0.95193418 2458 Q14978 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 41.217 40.788 3 0.00021638 55517 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.906 53.627 352150000 69696000 0 0 15703000 13901000 28708000 19191000 16893000 20376000 31627000 29317000 37406000 26114000 18636000 24581000 37663 2458 33613 313655;313656;313657;313658;313659;313660;313661;313662;313663;313664;313665;313666;313667 248158;248159;248160;248161;248162;248163;248164;248165;248166;248167;248168;248169;248170;248171;248172;248173;248174;248175;248176;248177;248178 248167 18 NKPGPYSSVPPPSAPPPKK Unmodified 1944.0469 0.046897198 2458 Q14978 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.36 2.17 2 23 1 1 2 2 2 2 3 2 2 2 2 2 1 1 33.822 33.563 3;4 1.702E-06 37052 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 68.129 65.068 461970000 37258000 0 2976000 29103000 25709000 19103000 33813000 31692000 13847000 43491000 75472000 64245000 43932000 25858000 15464000 37664 2458 33614 313668;313669;313670;313671;313672;313673;313674;313675;313676;313677;313678;313679;313680;313681;313682;313683;313684;313685;313686;313687;313688;313689;313690;313691;313692 248179;248180;248181;248182;248183;248184;248185;248186;248187;248188;248189;248190;248191;248192;248193;248194 248194 6 NKPILHTDLDVK Unmodified 1391.7773 0.77726428 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 43.34 42.366 3 0.0058774 45105 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.568 37.923 420150000 227550000 31217000 0 0 0 13951000 0 11214000 7321000 11053000 17468000 29278000 16693000 24322000 30087000 37665 19 33615 313693;313694;313695;313696;313697;313698;313699;313700;313701;313702;313703 248195;248196;248197;248198 248196 2 NKPIVNIDPQTAELNHLK Unmodified 2043.1113 0.11128837 632 O95239 KIF4A Chromosome-associated kinesin KIF4A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.55 3.09 4 18 2 1 1 1 1 1 2 2 2 2 2 1 2 2 68.924 67.986 3;4 0.00012708 77601 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 64.454 57.606 538830000 311680000 27874000 27305000 0 4586300 11649000 7284100 13578000 11740000 23539000 21205000 18400000 7615500 16295000 36074000 37666 632 33616 313704;313705;313706;313707;313708;313709;313710;313711;313712;313713;313714;313715;313716;313717;313718;313719;313720;313721;313722;313723;313724;313725 248199;248200;248201;248202;248203;248204;248205;248206;248207;248208;248209;248210 248201 10 NKPLEQSVEDLSK Unmodified 1485.7675 0.76748745 664 O95466 FMNL1 Formin-like protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 46.698 46.864 2;3 0.0001877 52611 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 64.224 56.246 214120000 0 0 0 15435000 12593000 16352000 16181000 13679000 11757000 24167000 24928000 18105000 23900000 17374000 19647000 37667 664 33617 313726;313727;313728;313729;313730;313731;313732;313733;313734;313735;313736;313737;313738;313739;313740;313741;313742;313743;313744;313745;313746;313747;313748;313749 248211;248212;248213;248214;248215;248216;248217;248218;248219;248220;248221;248222 248219 11 NKPNMSDPEESR Oxidation (M) 1418.6096 0.6096066 2476 Q15021 NCAPD2 Condensin complex subunit 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 6.2528 6.3699 3 0.002001 4393 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 53.034 45.31 25086000 0 0 0 1467100 1710600 2037600 1878400 0 1412600 2013900 3321100 5233900 1987000 2079700 1943500 37668 2476 33618 313750;313751;313752;313753;313754;313755;313756;313757;313758;313759;313760 248223 248223 4085 1 NKPNMSDPEESRGNDELVK Unmodified 2157.9961 0.99606019 2476 Q15021 NCAPD2 Condensin complex subunit 1 yes yes 0 0 2 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 2 1 1 1 1 1 1 1 1 1 1 1 32.998 32.236 3;4 0.001952 35293 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 54.764 45.718 153180000 11777000 0 61853000 2443900 0 8296500 5585000 6609400 4148600 7717500 10023000 12575000 6229200 4968000 10951000 37669 2476 33619 313761;313762;313763;313764;313765;313766;313767;313768;313769;313770;313771;313772;313773;313774 248224;248225;248226;248227;248228;248229 248224 6 NKPNMSDPEESRGNDELVK Oxidation (M) 2173.991 0.99097482 2476 Q15021 NCAPD2 Condensin complex subunit 1 yes yes 0 1 2 By MS/MS By MS/MS 2 0 2 1 1 26.561 22.363 3 0.014288 28222 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 48.623 44.628 36492000 18170000 0 18322000 0 0 0 0 0 0 0 0 0 0 0 0 37670 2476 33619 313775;313776 248230 248230 4085 1 NKPTELLEENTEEK Unmodified 1672.8156 0.81555986 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 40.14 40.268 3 6.5706E-06 44801 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 65.565 47.469 125440000 0 0 0 7737200 6015100 16250000 9157000 7977600 8056900 15241000 15297000 0 13085000 11890000 14733000 37671 2291 33620 313777;313778;313779;313780;313781;313782;313783;313784;313785;313786;313787 248231;248232;248233;248234;248235;248236;248237;248238;248239;248240;248241;248242 248237 12 NKRDVDFEGTDEPIFGK Unmodified 1965.9432 0.94321999 1451 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes yes 0 0 2 By MS/MS 2 0 1 1 70.355 62.07 3 0.0087533 82741 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.525 47.945 7516300 7516300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37672 1451 33621 313788 248243 248243 1 NKYEDEINK Unmodified 1151.5459 0.54586736 780;74;66;58;779;67;96;51 P04264;CON__P04264;P04259;CON__H-INV:HIT000292931;CON__P05787;P05787;CON__Q9H552;CON__H-INV:HIT000016045;CON__P13647;P13647;CON__P02538;P02538;CON__P04259;CON__Q5XKE5;Q5XKE5 KRT1;KRT6B;KRT8;KRT5;KRT6A;KRT79 Keratin, type II cytoskeletal 1;Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 8;Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 79 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.24 3.75 10 2 22 4 5 3 2 2 1 2 2 2 2 2 1 2 2 2 18.381 17.611 2;3 1.8777E-97 17346 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 233.57 174.78 + 21480000000 81357000 1079200000 75152000 3787800000 1348200000 495950000 1201600000 2902800000 634750000 2319800000 1521700000 1467100000 2609200000 1016900000 938040000 37673 780;779;51;67;74;58;66;96 33622 313789;313790;313791;313792;313793;313794;313795;313796;313797;313798;313799;313800;313801;313802;313803;313804;313805;313806;313807;313808;313809;313810;313811;313812;313813;313814;313815;313816;313817;313818;313819;313820;313821;313822 248244;248245;248246;248247;248248;248249;248250;248251;248252;248253;248254;248255;248256;248257;248258;248259;248260;248261;248262;248263;248264;248265;248266;248267;248268;248269;248270;248271;248272;248273 248268 14 NKYEDEINKR Unmodified 1307.647 0.64697839 780;74;66;58;779;67 P04264;CON__P04264;P04259;CON__P05787;P05787;CON__H-INV:HIT000016045;CON__P13647;P13647;CON__P02538;P02538;CON__P04259 KRT1;KRT6B;KRT8;KRT5;KRT6A Keratin, type II cytoskeletal 1;Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 8;Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 6A no no 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 2 2 2 1 17.831 18.003 2;3 2.9212E-40 17320 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 187.22 161.66 + 18159000000 0 0 0 2131400000 758840000 442980000 661340000 3879600000 389020000 788580000 922620000 5308000000 2286300000 385840000 204830000 37674 780;779;67;74;58;66 33623 313823;313824;313825;313826;313827;313828;313829;313830;313831;313832;313833;313834;313835;313836;313837;313838;313839;313840;313841;313842;313843;313844;313845 248274;248275;248276;248277;248278;248279;248280;248281;248282;248283;248284;248285;248286;248287;248288;248289;248290;248291 248286 11 NKYEDEINRR Unmodified 1335.6531 0.6531264 69 CON__P08729 yes yes 0 0 2 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.877 20.079 3 0.024189 20458 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 78.939 66.671 + 526610000 0 0 0 29427000 27459000 21421000 57019000 57167000 22692000 46619000 42639000 95581000 48166000 30838000 47581000 37675 69 33624 313846;313847;313848;313849;313850;313851;313852;313853;313854;313855;313856;313857 248292;248293;248294;248295;248296;248297;248298;248299 248297 2 NKYETEINITK Unmodified 1351.6983 0.69834526 1029 P15924 DSP Desmoplakin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 13 2 2 2 1 1 1 2 2 40.073 40.257 2;3 0.00011615 44900 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 120.77 103.6 167220000 0 0 0 21888000 0 0 15205000 69328000 5675900 5905900 7363100 23954000 17903000 0 0 37676 1029 33625 313858;313859;313860;313861;313862;313863;313864;313865;313866;313867;313868;313869;313870 248300;248301;248302 248301 2 NLAAFPASHDPDPAIPAPTATPSAR Unmodified 2484.2397 0.23973636 3330 Q8N4C8 MINK1 Misshapen-like kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 75.522 75.522 3 9.3991E-16 87213 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 71.052 67.653 50983000 0 0 0 3303400 4542800 5441300 5062800 5808600 0 10409000 6328500 0 5076600 5010200 0 37677 3330 33626 313871;313872;313873;313874;313875;313876;313877;313878;313879 248303;248304;248305;248306;248307;248308;248309;248310 248303 8 NLAASWYHK Unmodified 1088.5403 0.54032847 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 42.668 42.93 2 0.0055928 48206 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 77.318 55.547 17433000 0 0 0 0 0 0 0 6667200 0 3683800 7082300 0 0 0 0 37678 3023 33627 313880;313881;313882 248311;248312;248313 248313 3 NLACEESK Unmodified 949.4175 0.41749572 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 9.796 6.2812 2 0.031365 8712 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.109 27.261 300410000 15026000 285390000 0 0 0 0 0 0 0 0 0 0 0 0 0 37679 643 33628 313883;313884 248314;248315;248316;248317 248314 4 NLAEDGETVAR Unmodified 1173.5626 0.56258006 26 A6NED2 RCCD1 RCC1 domain-containing protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 30.306 30.622 2 0.016526 32263 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 55.064 30.909 3547100 0 0 0 0 0 0 0 0 0 0 0 0 0 3547100 0 37680 26 33629 313885 248318 248318 1 NLAHPVIQNFSYETFQQK Unmodified 2163.0749 0.074902863 2548 Q15554 TERF2 Telomeric repeat-binding factor 2 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 76.655 76.796 3 0.0010763 88334 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 29.092 24.333 9324900 0 0 0 0 0 2079100 0 0 0 0 0 0 0 0 7245700 37681 2548 33630 313886;313887 248319 248319 1 NLAIPVINK Unmodified 980.60187 0.6018661 1685 P52306 RAP1GDS1 Rap1 GTPase-GDP dissociation stimulator 1 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 72.165 72.439 2 0.018767 82519 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 54.549 35.767 20289000 0 0 0 0 0 0 0 0 0 0 4931800 0 0 4692600 10664000 37682 1685 33631 313888;313889;313890 248320;248321 248321 2 NLALCPANHAPLQEAAVIPR Unmodified 2154.1368 0.13679161 1010 P14923 JUP Junction plakoglobin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 77.935 77.74 3 2.234E-06 90096 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 64.249 55.307 24465000 0 0 0 17929000 0 0 0 0 0 0 0 0 6535600 0 0 37683 1010 33632 313891;313892;313893 248322;248323;248324;248325 248324 4 NLALDINELK Unmodified 1141.6343 0.63428844 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 79.037 78.554 2 0.0043308 90741 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 73.233 50.162 58461000 0 39214000 0 0 0 3173400 0 2308100 2851000 3754900 1686500 0 2097400 3375300 0 37684 19 33633 313894;313895;313896;313897;313898;313899;313900;313901;313902 248326;248327;248328;248329;248330;248331;248332;248333 248326 8 NLALPEDVRGK Unmodified 1210.667 0.66698555 4530 Q9HD67 MYO10 Unconventional myosin-X yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 47.592 47.776 3 0.018837 53994 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 30.729 18.566 29918000 0 0 0 1664100 0 5263300 0 2024200 0 6018700 3572400 0 3865800 0 7509500 37685 4530 33634 313903;313904;313905;313906;313907;313908;313909 248334 248334 1 NLAMGVNLTSMSK 2 Oxidation (M) 1396.669 0.66903574 959 P12004 PCNA Proliferating cell nuclear antigen yes yes 0 2 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 47.402 47.689 2 0.00097897 52337 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.801 43.273 46122000 0 0 0 0 0 0 2697700 2499700 1608000 3714000 12592000 0 0 0 23011000 37686 959 33635 313910;313911;313912;313913;313914;313915;313916 248335;248336;248337;248338;248339 248336 1255;1256 5 NLAMGVNLTSMSK Oxidation (M) 1380.6741 0.67412112 959 P12004 PCNA Proliferating cell nuclear antigen yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 62.484 62.881 2 0.00027314 71003 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.245 73.94 40120000 0 0 0 0 0 0 0 0 0 0 10388000 5604800 0 6408400 17719000 37687 959 33635 313917;313918;313919;313920 248340;248341;248342;248343 248340 1255;1256 3 NLAMGVNLTSMSK Unmodified 1364.6792 0.67920649 959 P12004 PCNA Proliferating cell nuclear antigen yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 74.652 74.882 2 6.9508E-05 86417 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 87.184 58.098 54395000 0 0 0 0 0 0 0 0 0 0 12198000 0 0 5356900 36840000 37688 959 33635 313921;313922;313923 248344;248345;248346 248345 3 NLANTVTEEILEK Unmodified 1472.7722 0.77223848 407 O60506 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 83.027 83.088 2 1.3858E-05 95703 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 115 61.23 135880000 0 0 0 2797900 6213400 7670800 5066400 6428100 9408300 20064000 10511000 21406000 0 12941000 33372000 37689 407 33636 313924;313925;313926;313927;313928;313929;313930;313931;313932;313933;313934 248347;248348;248349;248350;248351;248352;248353;248354;248355;248356;248357;248358 248350 12 NLAPHHASPDPPAPPASASDPHREK Unmodified 2595.2578 0.25784604 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 0 1 By MS/MS By MS/MS By matching By matching 8 3.46 1 3 1 1 1 1 31.443 30.252 5 0.026727 43394 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 17.158 5.0777 43958000 8872600 0 0 0 0 0 0 0 0 0 0 11726000 9108900 0 14250000 37690 5262 33637 313935;313936;313937;313938 248359;248360 248359 2 NLAPTPR Unmodified 767.42899 0.42898711 3213 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.771 19.972 2 0.021589 20501 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 106.42 66.752 471630000 0 0 0 31741000 30902000 33076000 36624000 29439000 28994000 43360000 52504000 49974000 45512000 36029000 53471000 37691 3213 33638 313939;313940;313941;313942;313943;313944;313945;313946;313947;313948;313949;313950 248361;248362;248363;248364;248365;248366;248367 248364 7 NLAQEPSQR Unmodified 1041.5203 0.52032131 2517 Q15334 LLGL1 Lethal(2) giant larvae protein homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 14.793 14.941 2 0.019553 14302 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 53.878 34.812 66314000 0 0 0 6959300 4111200 6187300 0 4480000 3677400 8891100 7683300 0 11789000 0 12535000 37692 2517 33639 313951;313952;313953;313954;313955;313956;313957;313958;313959 248368;248369;248370;248371 248368 4 NLAQLNDIHQQYK Unmodified 1583.8056 0.80560429 4414 Q9H6E4 CCDC134 Coiled-coil domain-containing protein 134 yes yes 0 0 0 By MS/MS 2 0 1 1 54.977 51.08 3 0.00082196 63864 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 76.522 67.726 11947000 0 0 11947000 0 0 0 0 0 0 0 0 0 0 0 0 37693 4414 33640 313960 248372 248372 1 NLAQTYLAR Unmodified 1048.5665 0.56654322 1253 P29590 PML Protein PML yes yes 0 0 0 By MS/MS 10 0 1 1 50.932 51.627 2 0.031872 57484 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.574 7.5728 9680800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9680800 37694 1253 33641 313961 248373 248373 1 NLASRVPGQEETVK Unmodified 1526.8053 0.80526994 3701 Q93008 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 39.959 34.987 3 0.00064306 47945 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.373 48.175 631240000 457770000 96773000 76698000 0 0 0 0 0 0 0 0 0 0 0 0 37695 3701 33642 313962;313963;313964;313965 248374;248375;248376;248377;248378 248376 5 NLATTVTEEILEK Unmodified 1459.777 0.77698951 322 O43390 HNRNPR Heterogeneous nuclear ribonucleoprotein R yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 88.866 87.762 2 6.3436E-07 101760 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 114.86 86.136 93079000 6871500 27800000 2076500 0 2488600 0 1622900 3274000 3913600 9828500 4860600 4963800 1738700 3960300 19680000 37696 322 33643 313966;313967;313968;313969;313970;313971;313972;313973;313974;313975;313976;313977;313978;313979 248379;248380;248381;248382;248383;248384;248385;248386;248387;248388;248389;248390;248391;248392 248381 13 NLAVQAQK Unmodified 870.49232 0.49231565 651 O95379 TNFAIP8 Tumor necrosis factor alpha-induced protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 17.201 16.801 2 0.0092881 16512 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 83.377 35.634 149820000 0 122070000 820030 1009300 1391700 0 2150500 2272400 0 2319800 5133700 4647800 0 3567200 4439200 37697 651 33644 313980;313981;313982;313983;313984;313985;313986;313987;313988;313989;313990 248393;248394;248395 248395 3 NLCDLGIVDPYPPLCDIK Unmodified 2101.0224 0.022398286 1631 P50579 METAP2 Methionine aminopeptidase 2 yes yes 0 0 0 By MS/MS 2 0 1 1 96.123 91.302 2 0.00010232 113055 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.41 89.848 18753000 0 18753000 0 0 0 0 0 0 0 0 0 0 0 0 0 37698 1631 33645 313991 248396 248396 1 NLCSDDTPMVR Oxidation (M) 1322.5595 0.55948529 1271 P30153 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 32.587 32.855 2 0.0042733 36199 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 56.432 49.372 48834000 0 0 0 0 2054100 4323400 0 0 3303300 4516800 10312000 8470800 4829100 4546900 6478100 37699 1271 33646 313992;313993;313994;313995;313996;313997;313998;313999;314000 248397;248398;248399;248400;248401;248402;248403;248404;248405 248398 1876 9 NLCSDDTPMVR Unmodified 1306.5646 0.56457067 1271 P30153 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 41.843 42.093 2 0.00028233 47628 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 90.629 64.115 56727000 0 0 0 0 4780000 6482400 3978100 0 0 7461400 6673100 8250300 0 6123400 12979000 37700 1271 33646 314001;314002;314003;314004;314005;314006;314007;314008;314009 248406;248407;248408;248409;248410;248411;248412;248413;248414;248415 248415 10 NLDAQYEMAR Oxidation (M) 1225.5397 0.53973612 3049 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.912 30.105 2 0.003834 32564 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 67.414 55.367 73007000 0 0 0 3780300 4247600 2677200 6139000 4726600 3460100 8337600 8735700 11466000 8473700 4167100 6795300 37701 3049 33647 314010;314011;314012;314013;314014;314015;314016;314017;314018;314019;314020;314021 248416;248417;248418;248419;248420;248421;248422;248423;248424;248425 248424 4675 10 NLDAQYEMAR Unmodified 1209.5448 0.5448215 3049 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.316 42.493 2 0.0019344 47429 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 102.07 71.813 100820000 0 0 0 4718100 7236400 3981800 8993400 9413400 4532900 9888600 9776100 9964700 7959200 8891300 15462000 37702 3049 33647 314022;314023;314024;314025;314026;314027;314028;314029;314030;314031;314032;314033 248426;248427;248428;248429;248430;248431;248432;248433;248434;248435;248436;248437 248434 12 NLDCPELISEFMK Unmodified 1594.7371 0.7371153 1487 P45973 CBX5 Chromobox protein homolog 5 yes yes 0 0 0 By MS/MS 2 0 1 1 95.428 90.563 2 0.00061102 112314 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.22 83.751 36767000 0 36767000 0 0 0 0 0 0 0 0 0 0 0 0 0 37703 1487 33648 314034 248438 248438 1 NLDDGIDDER Unmodified 1160.4946 0.49456007 958 P11940;Q9H361 PABPC1;PABPC3 Polyadenylate-binding protein 1;Polyadenylate-binding protein 3 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.751 31.937 2 0.0044901 35396 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 82.749 67.599 358180000 0 0 0 21103000 22744000 38938000 18823000 21297000 24590000 27924000 35426000 48064000 32007000 23572000 43696000 37704 958 33649 314035;314036;314037;314038;314039;314040;314041;314042;314043;314044;314045;314046 248439;248440;248441;248442;248443;248444;248445;248446;248447;248448;248449;248450;248451 248451 9 NLDDGIDDERLR Unmodified 1429.6797 0.67973508 958 P11940;Q9H361 PABPC1;PABPC3 Polyadenylate-binding protein 1;Polyadenylate-binding protein 3 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.185 46.354 3 1.4464E-08 51939 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 115.14 93.378 541750000 0 0 0 36806000 33423000 52942000 24347000 46391000 29825000 47009000 46070000 60868000 51077000 42077000 70918000 37705 958 33650 314047;314048;314049;314050;314051;314052;314053;314054;314055;314056;314057;314058 248452;248453;248454;248455;248456;248457;248458;248459;248460;248461 248457 10 NLDDGIDDERLRK Unmodified 1557.7747 0.7746981 958 P11940;Q9H361 PABPC1;PABPC3 Polyadenylate-binding protein 1;Polyadenylate-binding protein 3 yes no 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.72 2.93 4 21 2 1 1 2 2 2 2 2 2 2 1 1 2 2 1 37.895 37.365 3;4 0.00016587 51621 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 99.531 71.204 2368200000 498080000 57963000 94358000 95068000 56690000 148520000 103100000 103910000 125230000 202620000 111470000 174350000 194830000 113360000 288590000 37706 958 33651 314059;314060;314061;314062;314063;314064;314065;314066;314067;314068;314069;314070;314071;314072;314073;314074;314075;314076;314077;314078;314079;314080;314081;314082;314083 248462;248463;248464;248465;248466;248467;248468;248469;248470;248471;248472;248473;248474;248475;248476;248477 248468 8 NLDDTIDDEK Unmodified 1176.5146 0.51462681 2268 Q13310;P0CB38 PABPC4;PABPC4L Polyadenylate-binding protein 4;Polyadenylate-binding protein 4-like yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.34 1 2 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 38.64 38.096 2 0.00055012 36075 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 123.86 88.565 716810000 29670000 93586000 0 27959000 33602000 60560000 40571000 36201000 32450000 70142000 63462000 41119000 73553000 48777000 65154000 37707 2268 33652 314084;314085;314086;314087;314088;314089;314090;314091;314092;314093;314094;314095;314096;314097;314098 248478;248479;248480;248481;248482;248483;248484;248485;248486;248487;248488;248489;248490;248491;248492;248493;248494;248495;248496 248493 18 NLDENGLDLLSK Unmodified 1329.6776 0.67760981 822 P06493 CDK1 Cyclin-dependent kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 76.983 75.849 2 1.1016E-06 93704 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.94 98.1 3571700000 125550000 2335400000 38363000 51109000 52375000 103530000 90006000 75959000 65089000 103730000 88833000 140850000 64115000 81020000 155810000 37708 822 33653 314099;314100;314101;314102;314103;314104;314105;314106;314107;314108;314109;314110;314111;314112;314113;314114 248497;248498;248499;248500;248501;248502;248503;248504;248505;248506;248507;248508;248509;248510;248511;248512;248513;248514;248515 248502 18 NLDEQLSAPK Unmodified 1113.5666 0.5666028 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40.787 40.078 2 0.0048432 45501 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 71.349 48.661 579720000 5223200 118660000 0 23088000 25491000 33212000 26723000 34146000 22339000 50429000 40197000 43198000 46045000 53915000 57051000 37709 19 33654 314115;314116;314117;314118;314119;314120;314121;314122;314123;314124;314125;314126;314127;314128 248516;248517;248518;248519;248520;248521;248522;248523;248524;248525 248524 9 NLDEQLSAPKK Unmodified 1241.6616 0.66156582 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 30.151 30.187 3 0.0043542 33232 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 37.18 22.501 51308000 0 0 0 11575000 7543600 0 10297000 0 0 8097400 0 13795000 0 0 0 37710 19 33655 314129;314130;314131;314132;314133 248526;248527;248528;248529 248529 4 NLDFQDVLDK Unmodified 1205.5928 0.59281755 5168 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79.81 79.377 2 1.0411E-05 98001 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 132.01 86.929 871340000 217950 90519000 2257300 36392000 49938000 59607000 52411000 51555000 48979000 93888000 71082000 96182000 53236000 61991000 103080000 37711 5168 33656 314134;314135;314136;314137;314138;314139;314140;314141;314142;314143;314144;314145;314146;314147;314148 248530;248531;248532;248533;248534;248535;248536;248537;248538;248539;248540;248541;248542;248543;248544;248545;248546;248547 248534 18 NLDGAYQEAVINK Unmodified 1433.7151 0.71505795 2688 Q4LE39 ARID4B AT-rich interactive domain-containing protein 4B yes yes 0 0 0 By MS/MS 2 0 1 1 58.768 52.925 2 1.9896E-06 68038 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.46 66.312 94377000 0 94377000 0 0 0 0 0 0 0 0 0 0 0 0 0 37712 2688 33657 314149 248548;248549 248548 2 NLDGISHAPNAVK Unmodified 1334.6943 0.69426293 3667 Q92820 GGH Gamma-glutamyl hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching 8.07 3.35 5 2 21 1 4 2 2 2 2 2 2 2 2 2 2 2 1 38.561 37.443 2;3 1.8814E-06 47368 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 103.34 70.079 978110000 36806000 357890000 90862000 88744000 30705000 32338000 26625000 60327000 25239000 52211000 45290000 81367000 44246000 5453900 0 37713 3667 33658 314150;314151;314152;314153;314154;314155;314156;314157;314158;314159;314160;314161;314162;314163;314164;314165;314166;314167;314168;314169;314170;314171;314172;314173;314174;314175;314176;314177 248550;248551;248552;248553;248554;248555;248556;248557;248558;248559;248560;248561;248562;248563;248564 248562 8 NLDIERPTYTNLNR Unmodified 1717.8747 0.87474649 1961;3031;4093;1962 P68363;Q71U36;P0DPH8;P0DPH7;Q6PEY2;Q9NY65;Q9BQE3;P68366 TUBA1B;TUBA1A;TUBA3E;TUBA8;TUBA1C;TUBA4A Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-8 chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 1 2 2 2 2 2 59.362 59.47 2;3 1.4517E-115 67738 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 206.1 147.42 24463000000 0 0 0 986140000 1191700000 2018900000 1591100000 2702300000 1287500000 344280000 2317100000 2603100000 2341200000 2429100000 4650600000 37714 1961;3031;4093;1962 33659 314178;314179;314180;314181;314182;314183;314184;314185;314186;314187;314188;314189;314190;314191;314192;314193;314194;314195;314196;314197;314198;314199;314200 248565;248566;248567;248568;248569;248570;248571;248572;248573;248574;248575;248576;248577;248578;248579;248580;248581;248582;248583;248584;248585;248586;248587 248567 18 NLDITGVK Unmodified 858.48108 0.48108226 4697 Q9NWH9 SLTM SAFB-like transcription modulator yes yes 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 44.584 44.908 2 0.045385 50907 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 48.561 2.1907 48092000 0 0 0 0 0 15575000 0 14646000 0 0 0 17871000 0 0 0 37715 4697 33660 314201;314202;314203 248588 248588 1 NLDLAVLELMQSSVDNTK Oxidation (M) 2005.0038 0.003771334 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5 3.79 6 1 4 1 3 3 1 1 1 1 89.43 87.438 2;3 6.8901E-47 108388 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 135.14 105.45 73978000 0 49951000 12708000 0 0 0 0 0 0 3256800 0 2685800 0 1353800 4021800 37716 1986 33661 314204;314205;314206;314207;314208;314209;314210;314211;314212;314213;314214 248589;248590;248591;248592;248593;248594;248595;248596;248597 248590 3228 8 NLDLAVLELMQSSVDNTK Unmodified 1989.0089 0.0088567119 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.29 0.452 5 2 2 4 1 99.469 94.959 2;3 1.7248E-81 118095 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 190.46 179.87 321220000 38439000 278500000 4280300 0 0 0 0 0 0 0 0 0 0 0 0 37717 1986 33661 314215;314216;314217;314218;314219;314220;314221 248598;248599;248600;248601;248602;248603;248604 248602 6 NLDLDSIIAEVK Unmodified 1328.7187 0.71874635 79;74;66;58;779;96;53 CON__P35908v2;P35908;CON__P35908;P04259;CON__P13647;P13647;CON__O95678;O95678;CON__P02538;P02538;CON__P04259;CON__Q5XKE5;Q5XKE5 KRT2;KRT6B;KRT5;KRT75;KRT6A;KRT79 Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 79 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.13 2.49 6 49 2 2 2 4 4 4 4 4 4 6 5 4 3 4 3 90.508 90.281 2;3 9.1597E-10 113975 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 147.74 116.32 + 4760800000 12653000 40482000 1181000 242190000 207690000 173370000 134650000 541800000 249680000 1312700000 545410000 402940000 190250000 216250000 489580000 37718 79;779;74;53;58;66;96 33662 314222;314223;314224;314225;314226;314227;314228;314229;314230;314231;314232;314233;314234;314235;314236;314237;314238;314239;314240;314241;314242;314243;314244;314245;314246;314247;314248;314249;314250;314251;314252;314253;314254;314255;314256;314257;314258;314259;314260;314261;314262;314263;314264;314265;314266;314267;314268;314269;314270;314271;314272;314273;314274;314275;314276 248605;248606;248607;248608;248609;248610;248611;248612;248613;248614;248615;248616;248617;248618;248619;248620;248621;248622;248623;248624;248625;248626;248627;248628;248629;248630;248631;248632;248633;248634;248635;248636;248637;248638;248639;248640;248641;248642;248643;248644;248645;248646;248647;248648;248649;248650;248651;248652;248653;248654;248655;248656;248657;248658;248659;248660;248661;248662;248663;248664;248665;248666;248667;248668;248669;248670;248671;248672;248673;248674;248675;248676;248677;248678 248621 72 NLDLDSIIAEVR Unmodified 1356.7249 0.72489436 77 CON__P19013;P19013 KRT4 Keratin, type II cytoskeletal 4 no no 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 92.852 93.031 2 0.00071935 108200 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 78.655 50.913 + 7068400 0 0 0 0 0 0 1753000 5315400 0 0 0 0 0 0 0 37719 77 33663 314277;314278 248679;248680;248681;248682 248682 4 NLDLEPCTGFQR Unmodified 1448.6718 0.67181293 662 O95453 PARN Poly(A)-specific ribonuclease PARN yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 68.655 68.467 2 0.024046 78654 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 53.683 35.371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37720 662 33664 314279;314280 248683;248684 248683 2 NLDLEPCTGFQRK Unmodified 1576.7668 0.76677595 662 O95453 PARN Poly(A)-specific ribonuclease PARN yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 64.987 58.958 3 0.0011551 79042 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.393 57.596 68665000 51721000 0 16943000 0 0 0 0 0 0 0 0 0 0 0 0 37721 662 33665 314281;314282 248685;248686 248685 1 NLDLLYK Unmodified 877.49092 0.49091866 306 O43237 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 72.486 65.524 2 0.039422 83270 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.297 16.52 137740000 10691000 127050000 0 0 0 0 0 0 0 0 0 0 0 0 0 37722 306 33666 314283;314284 248687 248687 1 NLDLSWSELK Unmodified 1203.6136 0.61355299 2184 Q12769 NUP160 Nuclear pore complex protein Nup160 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 81.638 81.755 2 0.022891 93837 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 55.064 29.327 19049000 0 0 0 0 0 2479500 0 1808400 0 2413900 0 0 1320800 3741300 7285000 37723 2184 33667 314285;314286;314287;314288;314289;314290 248688 248688 1 NLDNAAEAAEQFK Unmodified 1419.663 0.66302238 2723 Q5F1R6 DNAJC21 DnaJ homolog subfamily C member 21 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 6 4 2 2 1 1 1 1 62.316 60.136 2 6.2441E-07 76255 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 139.98 117.95 416250000 0 371540000 3231900 0 0 0 0 0 0 0 16780000 0 0 0 24696000 37724 2723 33668 314291;314292;314293;314294 248689;248690;248691 248689 2 NLDNIVLQQPR Unmodified 1308.715 0.71499837 5096 Q9Y2D4 EXOC6B Exocyst complex component 6B yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 67.045 67.073 2 0.0014692 77319 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 89.08 70.768 18970000 0 0 0 2554300 0 3941800 0 2880400 0 0 0 0 3039200 0 6554000 37725 5096 33669 314295;314296;314297;314298;314299 248692;248693;248694 248693 3 NLDPDVFNQIVK Unmodified 1400.73 0.72997974 4425 Q9H6T3 RPAP3 RNA polymerase II-associated protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 84.522 83.318 2 7.1887E-05 95893 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 94.692 40.275 434460000 11064000 309630000 6589600 1884200 2647900 6947700 6991500 0 9491000 16136000 13269000 11158000 8393300 10966000 19283000 37726 4425 33670 314300;314301;314302;314303;314304;314305;314306;314307;314308;314309;314310;314311;314312;314313;314314 248695;248696;248697;248698;248699;248700;248701;248702;248703;248704;248705;248706;248707;248708 248705 14 NLDPFLLFDEFK Unmodified 1496.7551 0.75513185 172 O00625 PIR Pirin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.14 0.639 1 4 2 3 3 1 102.41 99.308 2 2.8638E-05 120570 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 129.88 93.184 323230000 171190000 149680000 2358300 0 0 0 0 0 0 0 0 0 0 0 0 37727 172 33671 314315;314316;314317;314318;314319;314320;314321 248709;248710;248711;248712;248713;248714;248715;248716;248717;248718 248714 10 NLDPLVYLLSK Unmodified 1273.7282 0.72818882 4126 Q9BSJ2 TUBGCP2 Gamma-tubulin complex component 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 96.223 96.341 2 0.0065686 111696 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.347 34.777 9771400 0 0 0 0 0 1269200 0 0 0 2308100 1432100 1103900 0 0 3658100 37728 4126 33672 314322;314323;314324;314325;314326 248719;248720 248720 2 NLDQSGTNVAK Unmodified 1145.5677 0.56766543 4094 Q9BQE5 APOL2 Apolipoprotein L2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 16.215 16.368 2 8.5714E-11 14690 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 152.11 103.83 319140000 0 0 0 21869000 24095000 0 37113000 32439000 39453000 0 58137000 0 0 56239000 49799000 37729 4094 33673 314327;314328;314329;314330;314331;314332;314333;314334;314335;314336 248721;248722;248723;248724;248725;248726;248727;248728;248729;248730;248731 248727 11 NLDSGHCVPEPSSSGQR Unmodified 1825.8013 0.80132355 1546 P48634 PRRC2A Protein PRRC2A yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 29.403 29.558 3 0.0022646 31883 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 32.926 28.577 32764000 0 0 0 0 2924400 0 5332100 0 3482800 0 0 0 0 3789100 17235000 37730 1546 33674 314337;314338;314339;314340;314341;314342;314343 248732;248733;248734;248735;248736;248737 248735 6 NLDSLEEDLDFLRDQFTTTEVNMAR Oxidation (M) 2987.3818 0.38184508 1856 P61758 VBP1 Prefoldin subunit 3 yes yes 0 1 1 By MS/MS By MS/MS 2.67 0.471 1 2 1 2 99.669 95.805 3 2.306E-05 114854 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 60.398 49.191 15227000 1130700 14096000 0 0 0 0 0 0 0 0 0 0 0 0 0 37731 1856 33675 314344;314345;314346 248738 248738 3009 1 NLDSLEEDLDFLRDQFTTTEVNMAR Unmodified 2971.3869 0.38693046 1856 P61758 VBP1 Prefoldin subunit 3 yes yes 0 0 1 By MS/MS 2 0 3 3 101.47 93.339 3;4 5.2659E-145 119732 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 181.38 167.9 81731000 81731000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37732 1856 33675 314347;314348;314349 248739;248740;248741 248739 3 NLDSTTVAIHDEEIYCK Unmodified 2006.9255 0.92552101 2607 Q16527 CSRP2 Cysteine and glycine-rich protein 2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 68.281 63.004 3 0.050967 76884 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 20.737 17.243 16579000 0 16579000 0 0 0 0 0 0 0 0 0 0 0 0 0 37733 2607 33676 314350;314351 248742 248742 1 NLDSTTVAVHGEEIYCK Unmodified 1934.9044 0.90439164 1123 P21291 CSRP1 Cysteine and glycine-rich protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 1 3 2 62.41 57.007 2;3 2.3163E-26 75780 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.15 95.489 375990000 28454000 326140000 21402000 0 0 0 0 0 0 0 0 0 0 0 0 37734 1123 33677 314352;314353;314354;314355;314356;314357 248743;248744;248745;248746;248747;248748;248749 248746 7 NLDTGEEIPLSLAEEK Unmodified 1756.8731 0.87307474 2734 Q5JSH3 WDR44 WD repeat-containing protein 44 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.9 3.81 6 2 12 1 6 1 1 1 1 1 1 1 1 1 1 1 1 1 81.705 80.174 2;3 1.2557E-187 100204 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 249.75 217.91 1606900000 46145000 1326800000 4838100 5332000 9411500 9653600 9709700 11346000 8411700 18092000 29738000 32357000 14486000 21564000 59056000 37735 2734 33678 314358;314359;314360;314361;314362;314363;314364;314365;314366;314367;314368;314369;314370;314371;314372;314373;314374;314375;314376;314377 248750;248751;248752;248753;248754;248755;248756;248757;248758;248759;248760;248761;248762;248763;248764;248765;248766;248767;248768 248760 19 NLDVGANIFIGNLDPEIDEK Unmodified 2185.0903 0.090278155 2533 Q15427 SF3B4 Splicing factor 3B subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.38 0.484 5 3 4 3 1 96.685 91.862 2;3 1.5713E-91 114481 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 206.43 184.89 401160000 317710000 79869000 3580200 0 0 0 0 0 0 0 0 0 0 0 0 37736 2533 33679 314378;314379;314380;314381;314382;314383;314384;314385 248769;248770;248771;248772;248773 248769 4 NLDVQLLDTK Unmodified 1157.6292 0.62920306 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 72.732 72.755 2 0.0029877 84103 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 107.15 47.909 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37737 965 33680 314386;314387;314388;314389;314390 248774;248775;248776;248777;248778 248776 5 NLDVQLLDTKR Unmodified 1313.7303 0.73031409 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 1 By matching By MS/MS By matching 10 0 3 1 1 1 63.284 63.551 3 0.017096 72460 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 28.327 21.125 8236400 0 0 0 0 0 0 1751900 0 0 0 0 4245000 0 2239600 0 37738 965 33681 314391;314392;314393 248779 248779 1 NLDYVATSIHEAVTK Unmodified 1659.8468 0.84680041 1049 P17174 GOT1 Aspartate aminotransferase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.83 3.67 6 2 4 2 4 2 1 1 2 76.819 73.751 2;3 3.7145E-31 93181 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 160.84 149.21 2335500000 571300000 1272400000 363180000 0 0 0 0 0 0 0 15687000 0 0 22471000 90539000 37739 1049 33682 314394;314395;314396;314397;314398;314399;314400;314401;314402;314403;314404;314405 248780;248781;248782;248783;248784;248785;248786;248787;248788;248789;248790;248791;248792;248793 248781 12 NLEAIVQEIK Unmodified 1155.6499 0.6499385 1534 P48163 ME1 NADP-dependent malic enzyme yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 85.38 81.754 2 0.0036581 101863 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.98 65.251 37672000 0 34793000 2879800 0 0 0 0 0 0 0 0 0 0 0 0 37740 1534 33683 314406;314407 248794 248794 1 NLEAVETLGSTSTICSDK Unmodified 1923.9095 0.9095366 792 P05023;P13637;P50993;Q13733 ATP1A1;ATP1A3;ATP1A2;ATP1A4 Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-3;Sodium/potassium-transporting ATPase subunit alpha-2;Sodium/potassium-transporting ATPase subunit alpha-4 yes no 0 0 0 By MS/MS 2.5 0.5 1 1 2 74.568 70.262 2 5.0289E-65 87813 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 207.31 194.55 80268000 0 80268000 0 0 0 0 0 0 0 0 0 0 0 0 0 37741 792 33684 314408;314409 248795 248795 1 NLEDDTLSECK Unmodified 1322.566 0.56601045 2456 Q14966 ZNF638 Zinc finger protein 638 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 37.78 37.558 2 0.00034656 41693 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 106.2 90.317 78906000 0 25735000 0 3103300 3203300 4026000 4170000 3711600 2637800 3990000 4166500 6323700 7108500 5115200 5614600 37742 2456 33685 314410;314411;314412;314413;314414;314415;314416;314417;314418;314419;314420;314421;314422 248796;248797;248798;248799;248800;248801;248802;248803;248804;248805;248806;248807;248808 248805 13 NLEDGINNLK Unmodified 1128.5775 0.57750184 3591 Q8WXH0 SYNE2 Nesprin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 31.644 32.101 2 0.033406 33921 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 42.109 14.584 15202000 0 0 0 0 0 0 0 0 0 0 3723100 0 2867900 2982800 5628600 37743 3591 33686 314423;314424;314425;314426 248809;248810 248809 2 NLEEAVEK Unmodified 930.46583 0.46582612 3005 Q6ZRQ5 MMS22L Protein MMS22-like yes yes 0 0 0 By MS/MS 2 0 1 1 30.327 25.934 2 0.030627 33939 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.738 13.021 25273000 0 25273000 0 0 0 0 0 0 0 0 0 0 0 0 0 37744 3005 33687 314427 248811 248811 1 NLEEEEDGETK Unmodified 1291.5416 0.54156984 4358 Q9H267 VPS33B Vacuolar protein sorting-associated protein 33B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.045 16.222 2 0.00028854 14934 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 103.7 83.18 49084000 0 0 0 3379800 1850000 2380600 3290500 2531400 2273700 3411800 5133500 9572500 4162400 5701100 5396800 37745 4358 33688 314428;314429;314430;314431;314432;314433;314434;314435;314436;314437;314438;314439 248812;248813;248814;248815;248816;248817;248818;248819;248820;248821;248822;248823;248824 248816 13 NLEEEMSLEK Oxidation (M) 1236.5544 0.55438314 327 O43426 SYNJ1 Synaptojanin-1 yes yes 0 1 0 By MS/MS 2 0 1 1 35.427 30.671 2 0.030352 40092 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 57.032 32.911 8211200 0 8211200 0 0 0 0 0 0 0 0 0 0 0 0 0 37746 327 33689 314440 248825 248825 1 NLEEEMSLEK Unmodified 1220.5595 0.55946851 327 O43426 SYNJ1 Synaptojanin-1 yes yes 0 0 0 By MS/MS 2 0 1 1 59.905 54.047 2 0.043872 69527 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.608 62.998 15320000 0 15320000 0 0 0 0 0 0 0 0 0 0 0 0 0 37747 327 33689 314441 248826 248826 0 NLEEGHSSTVAAHYNELQEVGLEK Unmodified 2653.262 0.26198794 296 O43148 RNMT mRNA cap guanine-N7 methyltransferase yes yes 0 0 0 By MS/MS 2 0 1 1 73.56 68.015 4 0.0001044 85952 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.373 54.911 32571000 0 32571000 0 0 0 0 0 0 0 0 0 0 0 0 0 37748 296 33690 314442 248827;248828 248827 2 NLEELEEK Unmodified 1002.487 0.4869555 5028 Q9UN86 G3BP2 Ras GTPase-activating protein-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35.75 35.298 2 0.012197 44762 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.57 25.339 670500000 0 228280000 3074400 27515000 34631000 39697000 45632000 30996000 43531000 42828000 35122000 36639000 35814000 27400000 39338000 37749 5028 33691 314443;314444;314445;314446;314447;314448;314449;314450;314451;314452;314453;314454;314455;314456 248829;248830;248831;248832;248833;248834;248835;248836 248830 6 NLEGANQHVSK Unmodified 1195.5945 0.59454889 3199 Q86XP3 DDX42 ATP-dependent RNA helicase DDX42 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 1 2 2 2 2 9.8414 9.9628 2;3 0.0019359 8779 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 70.028 29.677 253240000 0 0 0 22066000 11463000 21849000 23736000 16708000 11387000 23991000 8494400 30013000 26974000 19736000 36822000 37750 3199 33692 314457;314458;314459;314460;314461;314462;314463;314464;314465;314466;314467;314468;314469;314470;314471;314472;314473;314474;314475;314476;314477;314478;314479 248837;248838;248839;248840;248841;248842;248843;248844;248845;248846;248847;248848;248849 248840 12 NLEILQNQTDMK Unmodified 1445.7184 0.71842877 1106 P20585 MSH3 DNA mismatch repair protein Msh3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 64.185 64.404 2 0.01144 73721 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 61.353 42.082 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37751 1106 33693 314480;314481;314482 248850;248851;248852 248850 3 NLEILQNQTDMK Oxidation (M) 1461.7133 0.71334339 1106 P20585 MSH3 DNA mismatch repair protein Msh3 yes yes 0 1 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 54.281 54.101 2 0.0031562 61878 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 56.404 38.093 8387300 0 0 0 0 4812200 0 0 3575100 0 0 0 0 0 0 0 37752 1106 33693 314483;314484;314485 248853;248854 248854 1593 2 NLELNDDTILNDIK Unmodified 1628.8257 0.82573061 2933 Q6P3X3 TTC27 Tetratricopeptide repeat protein 27 yes yes 0 0 0 By MS/MS By MS/MS By matching 2 0 3 1 1 1 88.827 83.681 2 0.00026687 105922 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 119.39 109.38 289410000 21119000 264560000 3729500 0 0 0 0 0 0 0 0 0 0 0 0 37753 2933 33694 314486;314487;314488 248855;248856 248856 2 NLELQLKENK Unmodified 1227.6823 0.68230126 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 46.197 46.452 3 0.025342 52403 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 30.569 13.402 43502000 0 0 0 0 6013800 5436700 3847500 0 0 0 10851000 6857100 0 0 10496000 37754 1286 33695 314489;314490;314491;314492;314493;314494 248857;248858 248857 1 NLENDVNSLK Unmodified 1144.5724 0.57241646 455 O75116 ROCK2 Rho-associated protein kinase 2 yes yes 0 0 0 By MS/MS 10 0 1 1 19.706 20.328 3 0.022182 20314 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 32.415 3.4585 17333000 0 0 0 0 0 0 0 0 0 0 0 17333000 0 0 0 37755 455 33696 314495 248859 248859 1 NLENELELTK Unmodified 1201.619 0.6190323 1575 P49454 CENPF Centromere protein F yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 63.69 63.926 2 0.039672 72261 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 49.418 23.034 41170000 0 0 0 0 0 5850200 4273000 0 2894400 4582800 3588000 5183500 7732700 2367900 4697200 37756 1575 33697 314496;314497;314498;314499;314500;314501;314502;314503;314504 248860;248861 248861 2 NLENGALQPSDLDRNK Unmodified 1782.886 0.88603946 5279 Q9Y6E0 STK24 Serine/threonine-protein kinase 24;Serine/threonine-protein kinase 24 36 kDa subunit;Serine/threonine-protein kinase 24 12 kDa subunit yes yes 0 0 1 By matching By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 48.918 49.3 3 2.1376E-08 54478 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.746 71.165 66060000 0 0 0 0 0 0 11569000 7390800 0 0 0 12702000 0 14783000 19615000 37757 5279 33698 314505;314506;314507;314508;314509 248862;248863;248864;248865 248863 3 NLEPALPGR Unmodified 965.52943 0.52942943 2472 Q15014 MORF4L2 Mortality factor 4-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.626 49.782 2 0.0036202 55201 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 95.352 61.995 228110000 0 0 0 18376000 15105000 23263000 20822000 14139000 11736000 21110000 21796000 18894000 22044000 13427000 27398000 37758 2472 33699 314510;314511;314512;314513;314514;314515;314516;314517;314518;314519;314520;314521 248866;248867;248868;248869;248870;248871;248872;248873;248874;248875;248876;248877 248875 11 NLEPEWAAAASEVK Unmodified 1513.7413 0.7412727 2496 Q15084 PDIA6 Protein disulfide-isomerase A6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 76.82 76.098 2 2.7299E-29 93963 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 135.66 98.551 3842100000 0 3278000000 31557000 18280000 22246000 47564000 32229000 36990000 23817000 60944000 55212000 64396000 0 45492000 125370000 37759 2496 33700 314522;314523;314524;314525;314526;314527;314528;314529;314530;314531;314532;314533;314534;314535;314536 248878;248879;248880;248881;248882;248883;248884;248885;248886;248887;248888;248889;248890;248891;248892;248893;248894;248895;248896 248881 19 NLEQENQNLR Unmodified 1256.6109 0.61092723 3566 Q8WVV4 POF1B Protein POF1B yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 24.576 24.6 2 0.00057292 25928 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 129.77 107.81 51979000 0 0 0 22003000 3266300 0 4270300 16776000 0 0 5663300 0 0 0 0 37760 3566 33701 314537;314538;314539;314540;314541 248897;248898;248899;248900 248899 4 NLEQEQQQR Unmodified 1171.5582 0.55816338 3207 Q86YD1 PTOV1 Prostate tumor-overexpressed gene 1 protein yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 9.5553 9.7441 2 0.01094 7462 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.565 37.181 5385600 0 0 0 0 0 0 937210 552440 0 602550 0 1507400 0 0 1786100 37761 3207 33702 314542;314543;314544;314545;314546 248901 248901 1 NLEQILNGGESPK Unmodified 1397.7151 0.71505795 2225 Q13033 STRN3 Striatin-3 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 75.053 70.747 2 0.0037815 88757 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.913 75.298 19527000 0 19527000 0 0 0 0 0 0 0 0 0 0 0 0 0 37762 2225 33703 314547;314548 248902 248902 1 NLEQLGGTVTNPGGSGTSSR Unmodified 1930.9344 0.93444622 2587 Q15833 STXBP2 Syntaxin-binding protein 2 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 54.574 54.649 2 3.2571E-05 62039 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 76.588 67.634 4549400 0 0 0 0 0 3103900 1445500 0 0 0 0 0 0 0 0 37763 2587 33704 314549;314550 248903 248903 1 NLEQLGGTVTNPGGSGTSSRLEPR Unmodified 2426.215 0.21497817 2587 Q15833 STXBP2 Syntaxin-binding protein 2 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 62.471 62.526 3 2.0196E-11 71457 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 67.864 43.564 25296000 0 0 0 1754800 0 4698700 3720000 0 0 4633900 0 0 0 2974800 7514200 37764 2587 33705 314551;314552;314553;314554;314555;314556 248904;248905;248906 248905 2 NLEQQVNHSQQGHTNANAVLFSQVK Unmodified 2790.3798 0.37975209 3021 Q6ZW49 PAXIP1 PAX-interacting protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 72.249 64.011 4 2.3652E-38 84940 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 112.88 92.622 44991000 44991000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37765 3021 33706 314557 248907 248907 1 NLEQYNK Unmodified 907.43995 0.43994572 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14.909 14.637 2 0.023205 14196 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 102.71 78.082 350340000 0 219010000 1619900 5880500 5465500 11925000 11741000 8946000 11920000 9471000 10485000 9991500 10984000 16639000 16264000 37766 5071 33707 314558;314559;314560;314561;314562;314563;314564;314565;314566;314567;314568;314569;314570;314571 248908;248909;248910;248911;248912;248913;248914 248911 7 NLESALR Unmodified 801.43447 0.43446642 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 34.522 34.693 2 0.04393 38854 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 67.032 10.522 181440000 0 0 0 11521000 1140900 20246000 1837500 15920000 1841200 0 32017000 32493000 0 21742000 42681000 37767 2392 33708 314572;314573;314574;314575;314576;314577;314578;314579;314580;314581 248915 248915 1 NLESHLMSPAEIPGQPVPK Oxidation (M) 2059.0408 0.040825542 4596 Q9NRA8 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 66.577 66.792 3 8.2172E-05 76644 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 52.814 49.373 34468000 0 0 0 0 0 0 5753700 0 6884600 11026000 0 10804000 0 0 0 37768 4596 33709 314582;314583;314584;314585 248916;248917;248918;248919 248916 6000 4 NLESNHPGQTGGFVR Unmodified 1611.7754 0.7753668 2730 Q5HYK7 SH3D19 SH3 domain-containing protein 19 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 35.165 35.469 3 0.0034459 37930 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 29.341 12.402 26299000 0 0 0 0 0 4904100 0 3509100 0 5939100 3076400 0 0 0 8870300 37769 2730 33710 314586;314587;314588;314589;314590 248920 248920 1 NLESPEK Unmodified 815.4025 0.40249759 1204 P26374 CHML Rab proteins geranylgeranyltransferase component A 2 yes yes 0 0 0 By MS/MS 2 0 1 1 12.866 9.5716 2 0.030768 12955 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.9 43.727 65974000 0 65974000 0 0 0 0 0 0 0 0 0 0 0 0 0 37770 1204 33711 314591 248921 248921 1 NLESRGVEVDPSLIK Unmodified 1654.889 0.88899957 394 O60313 OPA1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 70.801 66.717 3 0.014228 82477 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 50.155 21.349 10384000 0 2254200 8129400 0 0 0 0 0 0 0 0 0 0 0 0 37771 394 33712 314592;314593 248922;248923 248923 1 NLESSTGFQIPSQELASQIDPQK Unmodified 2516.2395 0.23946159 5127 Q9Y2X9 ZNF281 Zinc finger protein 281 yes yes 0 0 0 By MS/MS By MS/MS 4.25 3.34 2 1 1 3 1 88.126 84.913 2;3 2.1852E-37 105264 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 164.63 152.46 74981000 0 69963000 0 0 0 0 0 0 0 5018400 0 0 0 0 0 37772 5127 33713 314594;314595;314596;314597 248924;248925;248926;248927;248928 248926 5 NLETFCEETRR Unmodified 1453.662 0.66197652 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 39.231 39.412 3 0.0096032 42399 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.875 17.645 87097000 0 0 0 4679000 1527600 9785200 2878400 0 5816400 6792200 7830300 17053000 6967800 8414300 15353000 37773 4819 33714 314598;314599;314600;314601;314602;314603;314604;314605;314606;314607;314608 248929;248930;248931 248930 3 NLETPLCK Unmodified 973.49027 0.49026674 1748 P54819 AK2 Adenylate kinase 2, mitochondrial;Adenylate kinase 2, mitochondrial, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 5.4 3.77 2 1 2 1 2 1 1 44.732 39.06 2 0.012141 50634 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.72 83.359 651100000 20638000 630460000 0 0 0 0 0 0 0 0 0 0 0 0 0 37774 1748 33715 314609;314610;314611;314612;314613 248932;248933;248934;248935;248936;248937;248938;248939 248933 8 NLETSSAFQSSSQK Unmodified 1512.7056 0.70561548 5127 Q9Y2X9 ZNF281 Zinc finger protein 281 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 35.437 34.719 2 1.4093E-29 43943 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 142.89 117.68 115190000 0 55333000 0 3783400 3210900 6928300 4669300 4418100 5893100 5947000 0 9433900 8766800 6806400 0 37775 5127 33716 314614;314615;314616;314617;314618;314619;314620;314621;314622;314623;314624;314625;314626;314627 248940;248941;248942;248943;248944;248945;248946;248947;248948;248949 248943 10 NLEVSSCVGSGGSSEAR Unmodified 1694.753 0.75297638 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.094 38.275 2 1.6389E-95 41839 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 185.59 161.5 171020000 0 0 0 8197600 8417000 13775000 10274000 9526200 10724000 14585000 17935000 19917000 15976000 12483000 29214000 37776 4285 33717 314628;314629;314630;314631;314632;314633;314634;314635;314636;314637;314638;314639 248950;248951;248952;248953;248954;248955;248956;248957;248958;248959;248960;248961 248959 12 NLFDMCGISEAQLK Oxidation (M) 1640.7538 0.753828 147 O00401 WASL Neural Wiskott-Aldrich syndrome protein yes yes 0 1 0 By MS/MS 10 0 1 1 76.807 76.965 2 0.00086363 88733 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 59.426 39.122 2153600 0 0 0 0 0 0 2153600 0 0 0 0 0 0 0 0 37777 147 33718 314640 248962 248962 196 1 NLFEDQNTLTSICEK Unmodified 1810.8407 0.84072875 1754 P55060 CSE1L Exportin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.67 3.86 7 2 12 6 3 1 1 1 1 1 1 1 1 1 1 1 1 77.873 76.54 2;3 0 88739 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 297.18 262.42 5928400000 0 5221900000 37572000 16408000 23328000 97132000 31955000 37702000 24026000 87411000 59181000 59967000 39415000 58558000 133900000 37778 1754 33719 314641;314642;314643;314644;314645;314646;314647;314648;314649;314650;314651;314652;314653;314654;314655;314656;314657;314658;314659;314660;314661 248963;248964;248965;248966;248967;248968;248969;248970;248971;248972;248973;248974;248975;248976;248977;248978;248979;248980;248981;248982 248964 19 NLFEEELK Unmodified 1020.5128 0.51277632 478 O75330 HMMR Hyaluronan mediated motility receptor yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 66.02 65.094 2 0.016804 73863 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 66.682 48.646 70134000 0 42217000 0 4476400 4952000 4754500 5165000 4973600 3595300 0 0 0 0 0 0 37779 478 33720 314662;314663;314664;314665;314666;314667;314668 248983;248984;248985;248986 248985 3 NLFEQLVR Unmodified 1017.5607 0.56072956 4329 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.011 81.071 2 0.0058895 93757 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 105.12 34.849 117500000 0 0 0 6170300 4613100 12842000 8112100 9780200 9493400 10213000 10383000 13474000 8089800 7271900 17053000 37780 4329 33721 314669;314670;314671;314672;314673;314674;314675;314676;314677;314678;314679;314680 248987;248988;248989;248990;248991;248992;248993;248994;248995;248996;248997;248998 248997 12 NLFFSTNIDDAIK Unmodified 1496.7511 0.75110911 425 O60701 UGDH UDP-glucose 6-dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 90.954 86.277 2 7.1489E-18 108365 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.89 129.89 314510000 46796000 256180000 11528000 0 0 0 0 0 0 0 0 0 0 0 0 37781 425 33722 314681;314682;314683;314684 248999;249000;249001;249002 248999 4 NLFIEAGCSVK Unmodified 1236.6173 0.61725816 687 O95758 PTBP3 Polypyrimidine tract-binding protein 3 yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 72.192 66.3 2 0.0060484 87734 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.607 32.961 14229000 10255000 0 3974700 0 0 0 0 0 0 0 0 0 0 0 0 37782 687 33723 314685;314686 249003 249003 1 NLFILAYNYK Unmodified 1257.6758 0.67575932 670 O95573 ACSL3 Long-chain-fatty-acid--CoA ligase 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 86.333 86.44 2 0.010514 99901 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.872 44.721 32787000 0 0 0 0 1950900 3072700 2328900 2939400 3929200 3942200 2442300 3361600 1652500 2382500 4785200 37783 670 33724 314687;314688;314689;314690;314691;314692;314693;314694;314695;314696;314697 249004;249005;249006;249007;249008;249009;249010 249008 7 NLFKYVGETQPTGQIK Unmodified 1821.9625 0.96249887 5180 Q9Y3Z3 SAMHD1 Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 yes yes 0 0 1 By MS/MS 2 0 1 1 59.494 51.268 3 0.025659 69633 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 25.866 0.81221 15492000 15492000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37784 5180 33725 314698 249011 249011 1 NLFQLAR Unmodified 860.48684 0.48683634 484 O75351 VPS4B Vacuolar protein sorting-associated protein 4B yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 67.31 67.459 2 0.030808 77443 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 74.396 46.223 54261000 0 0 0 0 2245200 10455000 5379900 3976800 0 5615700 5030700 3672200 3535500 4858200 9491900 37785 484 33726 314699;314700;314701;314702;314703;314704;314705;314706;314707;314708 249012 249012 1 NLFTALNAVEK Unmodified 1218.6608 0.66083754 4992 Q9ULD2 MTUS1 Microtubule-associated tumor suppressor 1 yes yes 0 0 0 By MS/MS 2 0 1 1 89.535 81.404 2 0.037734 105709 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.161 29.74 14314000 14314000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37786 4992 33727 314709 249013 249013 1 NLGDVGEK Unmodified 830.4134 0.41339662 5110 Q9Y2L1 DIS3 Exosome complex exonuclease RRP44 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 16.744 17.007 2 0.017697 15532 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 65.246 15.656 41073000 0 0 0 0 0 7725900 0 0 2779100 6548900 0 7865000 0 6778900 9374600 37787 5110 33728 314710;314711;314712;314713;314714;314715 249014 249014 1 NLGELIDR Unmodified 928.49779 0.49779495 2805 Q5VIR6 VPS53 Vacuolar protein sorting-associated protein 53 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 56.447 56.624 2 0.035078 63214 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.716 22.212 59712000 0 0 0 0 4290400 6573500 4896200 4381300 3530500 8784700 0 6391000 5602300 4953600 10308000 37788 2805 33729 314716;314717;314718;314719;314720;314721;314722;314723;314724;314725 249015 249015 1 NLGESEIR Unmodified 916.46141 0.46140945 2471 Q15008 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By matching 10 0 6 1 1 1 1 1 1 25.936 26.062 2 0.018652 27442 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 64.265 22.962 101380000 0 0 0 8467700 10030000 12768000 0 0 0 22373000 17409000 30334000 0 0 0 37789 2471 33730 314726;314727;314728;314729;314730;314731 249016 249016 1 NLGESEIRDAMMAK Unmodified 1563.7385 0.73851229 2471 Q15008 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 4 8 1 2 1 1 1 1 2 1 2 65.591 63.869 2;3 5.3482E-43 83440 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 202.29 165.77 352230000 5452200 244000000 4991600 0 0 8464500 0 0 0 18432000 16031000 29324000 0 4334800 21198000 37790 2471 33731 314732;314733;314734;314735;314736;314737;314738;314739;314740;314741;314742;314743 249017;249018;249019;249020;249021;249022;249023;249024;249025 249021 9 NLGESEIRDAMMAK Oxidation (M) 1579.7334 0.73342691 2471 Q15008 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 2 4 2 1 1 1 1 57.962 56.701 3 0.0041227 66944 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 52.5 30.725 113440000 0 0 55588000 5790900 0 13500000 0 0 0 21790000 0 0 0 0 16775000 37791 2471 33731 314744;314745;314746;314747;314748;314749 249026;249027;249028 249026 4071 1 NLGFETSAFK Unmodified 1112.5502 0.55022446 4840 Q9UBF8 PI4KB Phosphatidylinositol 4-kinase beta yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 66.843 67.079 2 0.024054 76068 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.161 23.311 15236000 0 0 0 0 0 2316400 0 1780300 0 0 2949300 0 0 2353900 5836000 37792 4840 33732 314750;314751;314752;314753;314754 249029 249029 1 NLGFSPEDREENVRR Unmodified 1816.8816 0.88162278 310 O43252 PAPSS1 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes yes 0 0 2 By MS/MS By matching By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 14 2 1 2 1 1 2 1 2 2 39.043 39.394 3;4 0.0020574 42729 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.028 31.865 108610000 0 0 0 0 0 19631000 5104400 0 9694700 5350100 7400700 20227000 6901600 7749300 26556000 37793 310 33733 314755;314756;314757;314758;314759;314760;314761;314762;314763;314764;314765;314766;314767;314768 249030;249031;249032;249033 249031 3 NLGFSPGDREENIR Unmodified 1602.775 0.77503245 642 O95340 PAPSS2 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 48.493 48.885 3 0.027649 54008 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 30.484 18.565 20093000 0 0 0 0 0 0 4017600 0 0 0 0 0 0 0 16075000 37794 642 33734 314769;314770 249034 249034 1 NLGFSPGDREENIRR Unmodified 1758.8761 0.87614348 642 O95340 PAPSS2 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes yes 0 0 2 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 1 2 2 2 2 2 2 2 2 2 2 41.533 41.741 3;4 0.0011988 46603 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 57.804 45.519 261970000 0 0 0 8489600 2454800 34385000 12981000 23624000 16267000 15577000 16318000 25934000 33276000 23167000 49493000 37795 642 33735 314771;314772;314773;314774;314775;314776;314777;314778;314779;314780;314781;314782;314783;314784;314785;314786;314787;314788;314789;314790;314791;314792;314793 249035;249036;249037;249038;249039 249035 5 NLGGVTQESFDLMIK Oxidation (M) 1666.8236 0.82362212 509 O75496 GMNN Geminin yes yes 0 1 0 By MS/MS 2 0 1 1 84.739 79.995 2 0.00019352 99511 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.094 58.76 33491000 0 33491000 0 0 0 0 0 0 0 0 0 0 0 0 0 37796 509 33736 314794 249040 249040 657 1 NLGIPIITVLGDSK Unmodified 1438.8395 0.83953018 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 94.781 94.33 2 0.00035076 109845 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 76.655 56.868 86481000 0 12963000 2846500 1551200 3330500 5012400 2840900 5797900 4973400 11335000 6708200 6555000 3434700 6086000 13046000 37797 2361 33737 314795;314796;314797;314798;314799;314800;314801;314802;314803;314804;314805;314806;314807;314808 249041;249042;249043;249044;249045;249046;249047 249043 7 NLGLYVK Unmodified 805.46979 0.46978929 2441 Q14697 GANAB Neutral alpha-glucosidase AB yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 50.898 51.049 2 0.03857 57540 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 69.432 40.904 303450000 0 0 0 12461000 14895000 15578000 19996000 22722000 8313100 0 33921000 43584000 24050000 30150000 77777000 37798 2441 33738 314809;314810;314811;314812;314813;314814;314815;314816;314817;314818;314819 249048;249049;249050;249051;249052 249048 5 NLGMAVEAWNEEGK Unmodified 1546.7086 0.70859237 3159 Q86V21 AACS Acetoacetyl-CoA synthetase yes yes 0 0 0 By MS/MS 2 0 1 1 76.355 73.593 2 0.0015287 89639 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 70.488 57.135 3184500 0 0 3184500 0 0 0 0 0 0 0 0 0 0 0 0 37799 3159 33739 314820 249053 249053 1 NLGMAVEAWNEEGK Oxidation (M) 1562.7035 0.70350699 3159 Q86V21 AACS Acetoacetyl-CoA synthetase yes yes 0 1 0 By MS/MS 2 0 1 1 67.968 64.244 2 0.01191 79613 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 56.359 41.099 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37800 3159 33739 314821 249054 249054 4778 1 NLGMTDAFELGK Oxidation (M) 1310.6177 0.61765209 1344 P35237 SERPINB6 Serpin B6 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64.58 63.971 2 2.1262E-08 72479 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 127.76 100.98 323950000 0 112550000 2975900 7339600 5986700 6732100 13695000 6356200 7737800 9319200 34910000 30231000 11087000 19879000 55151000 37801 1344 33740 314822;314823;314824;314825;314826;314827;314828;314829;314830;314831;314832;314833;314834;314835 249055;249056;249057;249058;249059;249060;249061;249062;249063;249064;249065;249066;249067;249068 249060 2040 13 NLGMTDAFELGK Unmodified 1294.6227 0.62273747 1344 P35237 SERPINB6 Serpin B6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 78.217 77.75 2 9.404E-05 95874 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.943 72.559 382550000 0 132450000 2018700 0 5716000 9140200 7849900 9590100 5973400 10120000 29115000 25330000 8143500 26902000 110200000 37802 1344 33740 314836;314837;314838;314839;314840;314841;314842;314843;314844;314845;314846;314847;314848 249069;249070;249071;249072;249073;249074;249075;249076;249077;249078;249079;249080 249072 12 NLGPGMTK Oxidation (M) 832.41129 0.41128813 1073 P18206 VCL Vinculin yes yes 0 1 0 By MS/MS By MS/MS 2.67 0.471 1 2 1 2 12.803 9.2437 2 0.025857 12256 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.478 37.671 535770000 1496700 534270000 0 0 0 0 0 0 0 0 0 0 0 0 0 37803 1073 33741 314849;314850;314851 249081;249082 249081 2 NLGPGMTK Unmodified 816.41637 0.41637351 1073 P18206 VCL Vinculin yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 25.617 21.447 2 0.015404 28424 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.992 53.888 781830000 0 781830000 0 0 0 0 0 0 0 0 0 0 0 0 0 37804 1073 33741 314852;314853 249083;249084;249085 249084 3 NLGQPIK Unmodified 768.44939 0.4493882 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 25.204 21.655 2 0.03056 27347 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 92.692 40.461 132170000 0 82033000 50133000 0 0 0 0 0 0 0 0 0 0 0 0 37805 1337 33742 314854;314855 249086;249087 249087 2 NLGSINTELQDVQR Unmodified 1585.806 0.80599822 492 O75396 SEC22B Vesicle-trafficking protein SEC22b yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.608 68.687 2 1.0765E-60 78145 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 181.68 152.95 295510000 0 0 0 10866000 17109000 24345000 23813000 22372000 17317000 36730000 29285000 36006000 18496000 25434000 33742000 37806 492 33743 314856;314857;314858;314859;314860;314861;314862;314863;314864;314865;314866;314867 249088;249089;249090;249091;249092;249093;249094;249095;249096;249097;249098;249099 249091 12 NLGTALAELR Unmodified 1056.5928 0.59275797 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 74.075 74.079 2 0.0071285 85922 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 63.216 15.367 159150000 0 0 0 9681400 9372200 41946000 12932000 18255000 12216000 0 17260000 0 16629000 20863000 0 37807 5187 33744 314868;314869;314870;314871;314872;314873;314874;314875;314876 249100;249101;249102;249103;249104;249105 249104 2 NLGTIAK Unmodified 715.42284 0.4228391 1002 P14625 HSP90B1 Endoplasmin yes yes 0 0 0 By MS/MS By matching By matching 2 0 3 1 1 1 24.708 20.594 1 0.042619 29181 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 136.11 27.875 715090000 104880000 597210000 13005000 0 0 0 0 0 0 0 0 0 0 0 0 37808 1002 33745 314877;314878;314879 249106 249106 0 NLGVHISR Unmodified 894.50355 0.50354903 3535;3280 Q8WU79;Q8IYB5 SMAP2;SMAP1 Stromal membrane-associated protein 2;Stromal membrane-associated protein 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 30.676 30.815 2 0.019682 33255 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 63.419 9.8645 29836000 0 0 0 0 0 5278700 4599600 5036800 3417100 5947900 0 0 5555800 0 0 37809 3535;3280 33746 314880;314881;314882;314883;314884;314885 249107 249107 1 NLGVVVAPHTLK Unmodified 1246.7398 0.73975656 4246 Q9BYD2 MRPL9 39S ribosomal protein L9, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 65.012 58.983 3 0.0020923 79635 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.557 42.805 16915000 14538000 0 2377100 0 0 0 0 0 0 0 0 0 0 0 0 37810 4246 33747 314886;314887 249108;249109 249108 2 NLHDALSGHTSNNIYEAVK Unmodified 2082.013 0.013030887 4477 Q9H9T3 ELP3 Elongator complex protein 3 yes yes 0 0 0 By MS/MS 10 0 1 1 59.346 59.94 3 0.013731 67551 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 21.036 11.506 7933900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7933900 37811 4477 33748 314888 249110 249110 1 NLHQSGFSLSGAQIDDNIPR Unmodified 2168.061 0.061043713 2613 Q16555 DPYSL2 Dihydropyrimidinase-related protein 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 74.804 75.008 3 0.00035449 85981 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.415 35.358 51621000 0 0 0 0 0 0 0 0 0 4932000 6093200 12795000 0 4880000 22921000 37812 2613 33749 314889;314890;314891;314892;314893 249111;249112;249113 249111 3 NLHSEISGK Unmodified 983.50361 0.50360861 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13.603 13.052 2 2.1436E-05 11933 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 151.44 125.55 533530000 98256000 48013000 48160000 83564000 18740000 17887000 22582000 32929000 13828000 24893000 22239000 25848000 44199000 15486000 16906000 37813 1029 33750 314894;314895;314896;314897;314898;314899;314900;314901;314902;314903;314904;314905;314906;314907;314908 249114;249115;249116;249117;249118;249119;249120;249121;249122;249123;249124;249125;249126;249127;249128;249129 249121 15 NLHSEISGKR Unmodified 1139.6047 0.60471964 1029 P15924 DSP Desmoplakin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 2 2 1 2 2 2 2 1 2 2 1 10.774 10.88 2;3 0.0018999 8666 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 53.013 36.436 478430000 0 0 0 97239000 15670000 15467000 19136000 143160000 11187000 18446000 25654000 71066000 48877000 12535000 0 37814 1029 33751 314909;314910;314911;314912;314913;314914;314915;314916;314917;314918;314919;314920;314921;314922;314923;314924;314925;314926;314927 249130;249131;249132;249133;249134;249135;249136;249137;249138;249139;249140 249136 4 NLHVIDLDDATFLSAK Unmodified 1770.9152 0.91521432 3370 Q8N8R7 ARL14EP ARL14 effector protein yes yes 0 0 0 By MS/MS 2 0 1 1 91.642 83.511 3 0.00015438 108269 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.911 61.479 10192000 10192000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37815 3370 33752 314928 249141;249142 249142 2 NLIATAQAQNQQQTEGVK Unmodified 1940.9916 0.99156716 594 O94864 SUPT7L STAGA complex 65 subunit gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 18 2 2 1 2 1 1 2 1 1 2 1 2 45.801 45.963 2;3 2.8349E-47 50509 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 155.42 143.89 105540000 0 0 0 9015700 3798200 5122000 9951900 4354200 4799000 14888000 9188300 9940700 12634000 4723400 17126000 37816 594 33753 314929;314930;314931;314932;314933;314934;314935;314936;314937;314938;314939;314940;314941;314942;314943;314944;314945;314946 249143;249144;249145;249146;249147;249148;249149;249150;249151 249146 9 NLIDAGVDALR Unmodified 1155.6248 0.62478638 964 P12268 IMPDH2 Inosine-5'-monophosphate dehydrogenase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 77.445 77.508 2 0.00033839 88914 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 111.06 32.722 252700000 0 0 0 9452900 9439600 0 7878000 17190000 7066300 22637000 30829000 34670000 15492000 23818000 74230000 37817 964 33754 314947;314948;314949;314950;314951;314952;314953;314954;314955;314956;314957 249152;249153;249154;249155;249156;249157;249158;249159;249160 249154 8 NLIDAGVDGLR Unmodified 1141.6091 0.60913632 1114 P20839 IMPDH1 Inosine-5'-monophosphate dehydrogenase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.095 71.169 2 0.00051485 81004 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.749 30.895 72333000 0 0 0 2884100 4162500 3834800 3110500 4274700 3004300 5063300 8112200 10647000 4272500 5570500 17397000 37818 1114 33755 314958;314959;314960;314961;314962;314963;314964;314965;314966;314967;314968;314969 249161;249162;249163;249164;249165;249166;249167;249168;249169;249170;249171;249172 249164 12 NLIDEDGNNQWPEGLK Unmodified 1840.8592 0.85915601 149 O00410 IPO5 Importin-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 77.052 76.524 2 2.0105E-72 93804 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 193.81 157.14 373090000 0 68944000 0 7769100 11192000 38890000 10674000 13704000 12598000 33026000 28297000 28326000 13028000 24950000 81688000 37819 149 33756 314970;314971;314972;314973;314974;314975;314976;314977;314978;314979;314980;314981;314982;314983 249173;249174;249175;249176;249177;249178;249179;249180;249181;249182;249183;249184;249185;249186 249176 14 NLIDRETGMR Oxidation (M) 1219.5979 0.5979197 1029 P15924 DSP Desmoplakin yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 26.302 26.55 3 0.011598 28657 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 42.001 35.341 230150000 0 0 0 0 19632000 25493000 20414000 40374000 0 20150000 19306000 29944000 31334000 12354000 11153000 37820 1029 33757 314984;314985;314986;314987;314988;314989;314990;314991;314992;314993 249187;249188;249189;249190 249190 1439 2 NLIEMSELEIK Oxidation (M) 1333.6799 0.679918 5254 Q9Y5X3 SNX5 Sorting nexin-5 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 77.501 73.752 2 0.00014016 92176 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 111.65 75.095 57595000 0 54810000 2784800 0 0 0 0 0 0 0 0 0 0 0 0 37821 5254 33758 314994;314995 249191;249192 249191 6654 2 NLIEMSELEIK Unmodified 1317.685 0.68500338 5254 Q9Y5X3 SNX5 Sorting nexin-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 87.747 82.612 2 2.0824E-06 104005 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.16 108.63 107430000 13274000 91829000 2331100 0 0 0 0 0 0 0 0 0 0 0 0 37822 5254 33758 314996;314997;314998 249193;249194;249195 249193 3 NLIEQLEQDK Unmodified 1228.6299 0.62993134 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 75.566 75.043 2 4.9754E-06 93940 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.3 63.814 102610000 0 38036000 0 0 2898200 5849600 3599900 4662400 4670100 7906700 5031200 8396200 6411700 4382100 10764000 37823 2291 33759 314999;315000;315001;315002;315003;315004;315005;315006;315007;315008;315009;315010;315011 249196;249197;249198;249199;249200;249201;249202;249203;249204;249205;249206;249207;249208 249199 12 NLIESMQINGSVLK Oxidation (M) 1560.8181 0.81814282 1134 P22102 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70.54 69.438 2 2.5337E-14 89390 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 116.24 86.494 403710000 55640000 267760000 22303000 1843100 1772000 5998000 0 2598200 3817600 6029500 6951700 7739100 5010500 5396700 10852000 37824 1134 33760 315012;315013;315014;315015;315016;315017;315018;315019;315020;315021;315022;315023;315024;315025 249209;249210;249211;249212;249213;249214;249215;249216;249217;249218;249219;249220;249221 249214 1624 12 NLIESMQINGSVLK Unmodified 1544.8232 0.82322819 1134 P22102 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 3 1 86.915 82.228 2 0.00062075 100110 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 115.18 69.017 360200000 135550000 219260000 5400000 0 0 0 0 0 0 0 0 0 0 0 0 37825 1134 33760 315026;315027;315028;315029;315030 249222;249223;249224;249225;249226;249227 249227 4 NLIEWLNK Unmodified 1028.5655 0.56548059 3796 Q96DG6 CMBL Carboxymethylenebutenolidase homolog yes yes 0 0 0 By MS/MS 10 0 1 1 81.104 81.319 2 0.0066147 93638 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 99.375 50.619 34380000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34380000 37826 3796 33761 315031 249228 249228 1 NLIHGSDSVESARR Unmodified 1539.7754 0.7753668 2257 Q13232 NME3 Nucleoside diphosphate kinase 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 24.437 24.557 3 0.00067589 25394 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 41.092 32.041 132520000 0 0 0 12142000 17901000 10931000 11807000 11200000 13301000 10641000 17860000 26741000 0 0 0 37827 2257 33762 315032;315033;315034;315035;315036;315037;315038;315039;315040 249229;249230;249231;249232;249233;249234;249235;249236 249231 7 NLILAGVK Unmodified 826.52764 0.52763852 4838 Q9UBE0 SAE1 SUMO-activating enzyme subunit 1;SUMO-activating enzyme subunit 1, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 60.362 58.987 2 0.022922 65625 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.76 30.091 1428200000 775900000 195620000 311030000 0 4336500 5525100 5130600 4206200 3293300 8280700 23333000 17531000 7860600 13216000 52937000 37828 4838 33763 315041;315042;315043;315044;315045;315046;315047;315048;315049;315050;315051;315052;315053;315054;315055 249237;249238;249239;249240;249241;249242;249243;249244;249245;249246;249247;249248 249248 12 NLILSAFPR Unmodified 1029.5971 0.59711507 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 80.778 80.875 2 0.003114 93072 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 124.08 91.267 126650000 0 0 0 0 6980100 15306000 12273000 14570000 8943300 16469000 13388000 0 13086000 0 25637000 37829 19 33764 315056;315057;315058;315059;315060;315061;315062;315063;315064;315065;315066 249249;249250;249251;249252;249253;249254;249255;249256;249257;249258 249252 10 NLILVVR Unmodified 825.54362 0.54362294 2040 Q00610 CLTC Clathrin heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.829 68.909 2 0.023344 77960 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 91.584 11.207 243550000 0 0 0 8164400 9598300 18554000 13817000 12830000 12064000 24264000 24202000 31473000 13437000 22174000 52979000 37830 2040 33765 315067;315068;315069;315070;315071;315072;315073;315074;315075;315076;315077;315078 249259;249260;249261;249262;249263;249264;249265 249263 6 NLINQMLTINPAK Oxidation (M) 1484.8021 0.80209882 2315 Q13555;Q13554 CAMK2G;CAMK2B Calcium/calmodulin-dependent protein kinase type II subunit gamma;Calcium/calmodulin-dependent protein kinase type II subunit beta yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 2 1 1 1 1 1 1 1 1 72.412 72.405 2 0.0011804 83532 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 61.65 35.711 45637000 0 0 0 2823800 6428700 7899300 0 0 0 5752000 5181700 9320500 3417400 4813700 0 37831 2315 33766 315079;315080;315081;315082;315083;315084;315085;315086;315087;315088 249266;249267;249268;249269;249270;249271;249272;249273;249274 249274 3779 9 NLINQMLTINPAK Unmodified 1468.8072 0.8071842 2315 Q13555;Q13554 CAMK2G;CAMK2B Calcium/calmodulin-dependent protein kinase type II subunit gamma;Calcium/calmodulin-dependent protein kinase type II subunit beta yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 7.33 3.77 2 4 1 1 1 1 1 1 89.015 86.935 2 0.0017571 110257 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 106.29 92.857 49844000 11813000 16017000 0 0 0 0 0 3724500 0 5067000 0 0 0 3089500 10133000 37832 2315 33766 315089;315090;315091;315092;315093;315094 249275;249276;249277 249276 3 NLIPMDPNGLSDPYVK Unmodified 1771.8815 0.88147135 1051 P17252;P05129 PRKCA;PRKCG Protein kinase C alpha type;Protein kinase C gamma type yes no 0 0 0 By MS/MS 2 0 1 1 88.432 83.59 2 0.00066387 103897 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.89 78.512 64453000 0 64453000 0 0 0 0 0 0 0 0 0 0 0 0 0 37833 1051 33767 315095 249278 249278 1 NLIYDNADNK Unmodified 1178.5568 0.5567664 5182 Q9Y446 PKP3 Plakophilin-3 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.806 34.991 2 0.0024043 38585 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 83.948 69.741 112420000 0 0 0 9369000 5828100 9653600 9388300 12577000 0 10156000 11798000 14775000 9095100 9096500 10684000 37834 5182 33768 315096;315097;315098;315099;315100;315101;315102;315103;315104;315105;315106;315107 249279;249280;249281;249282;249283;249284;249285;249286;249287;249288;249289;249290 249288 12 NLKVPSGQNADVQKTDN Unmodified 1826.9123 0.91225421 4310 Q9GZZ1 NAA50 N-alpha-acetyltransferase 50 yes yes 0 0 2 By MS/MS By matching By MS/MS 10 0 3 1 1 1 32.176 32.446 3 0.0073485 34850 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 32.917 25.859 13970000 0 0 0 2213300 0 0 0 0 0 0 2702600 9054200 0 0 0 37835 4310 33769 315108;315109;315110 249291 249291 0 NLLAQENVETQNLK Unmodified 1612.842 0.84204938 5097 Q9Y2D8 SSX2IP Afadin- and alpha-actinin-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 73.651 72.568 2;3 0.0018205 76604 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.813 23.119 81225000 0 34788000 0 0 0 4411800 0 11557000 0 10018000 0 20451000 0 0 0 37836 5097 33770 315111;315112;315113;315114;315115;315116 249292;249293;249294;249295;249296;249297 249294 5 NLLDEELQRLK Unmodified 1369.7565 0.75652884 2501 Q15149 PLEC Plectin yes yes 0 0 1 By MS/MS 2 0 1 1 87.193 82.384 3 0.01235 102482 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 56.225 43.728 10520000 0 10520000 0 0 0 0 0 0 0 0 0 0 0 0 0 37837 2501 33771 315117 249298 249298 1 NLLDIDAPVTVCGDIHGQFFDLMK Unmodified 2717.3193 0.31930859 2151 Q08209 PPP3CA Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 98.419 92.598 3 4.6871E-17 117055 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.222 77.532 19410000 19410000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37838 2151 33772 315118;315119 249299;249300 249300 2 NLLDVIDQAR Unmodified 1155.6248 0.62478638 2114 Q05397 PTK2 Focal adhesion kinase 1 yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 83.102 83.144 2 0.021125 96613 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 56.432 23.054 90251000 0 0 0 1970400 3863700 8635000 4395900 6125800 6035500 15580000 0 0 8445000 9584700 25615000 37839 2114 33773 315120;315121;315122;315123;315124;315125;315126;315127;315128;315129 249301;249302 249302 2 NLLEISGPETVPLPNVPSIALPSK Unmodified 2484.3839 0.38394098 4390 Q9H444 CHMP4B Charged multivesicular body protein 4b yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 98.295 94.274 3 0.0047102 113268 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 25.823 23.21 41550000 0 41550000 0 0 0 0 0 0 0 0 0 0 0 0 0 37840 4390 33774 315130;315131 249303;249304 249303 2 NLLESIPTHSDQEK Unmodified 1609.7948 0.79476484 2688 Q4LE39 ARID4B AT-rich interactive domain-containing protein 4B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.56 3 2 1 13 1 2 1 1 2 1 1 1 1 1 1 1 2 56.69 56.101 2;3 0.00067442 62902 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 56.29 45.028 157620000 0 7924100 19594000 0 6161000 10486000 12024000 10762000 6317000 14894000 12816000 14115000 10477000 11283000 20763000 37841 2688 33775 315132;315133;315134;315135;315136;315137;315138;315139;315140;315141;315142;315143;315144;315145;315146;315147 249305;249306;249307;249308;249309;249310;249311;249312;249313;249314;249315;249316;249317;249318 249317 13 NLLHSLQSSGIGSK Unmodified 1439.7732 0.77324153 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.16 2.46 2 17 2 1 1 2 1 3 2 1 1 2 1 1 1 61.32 60.524 2;3 8.5506E-30 85209 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 103.3 95.192 249480000 27038000 0 0 4852600 5654800 64789000 7326000 12641000 37203000 13882000 13252000 21509000 14608000 9797700 16924000 37842 3641 33776 315148;315149;315150;315151;315152;315153;315154;315155;315156;315157;315158;315159;315160;315161;315162;315163;315164;315165;315166 249319;249320;249321;249322;249323;249324;249325;249326;249327;249328;249329;249330;249331;249332 249325 6 NLLHVTDTGVGMTR Unmodified 1512.7719 0.77186132 1002 P14625 HSP90B1 Endoplasmin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 4 1 1 2 60.791 61.2 2;3 0.0060557 69201 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.517 31.34 45280000 0 0 0 0 0 0 0 0 0 8588600 0 10959000 0 0 25732000 37843 1002 33777 315167;315168;315169;315170 249333;249334 249334 1 NLLHVTDTGVGMTREELVK Oxidation (M) 2127.0994 0.099403054 1002 P14625 HSP90B1 Endoplasmin yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 5 3.81 1 4 2 4 4 2 1 1 1 1 1 72.846 70.278 2;3;4 3.0515E-31 72174 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 105.99 87.896 547660000 283750000 101940000 3145400 0 0 30864000 0 0 0 19760000 0 20376000 0 0 87817000 37844 1002 33778 315171;315172;315173;315174;315175;315176;315177;315178;315179;315180;315181 249335;249336;249337;249338;249339;249340;249341;249342;249343 249339 1363 7 NLLHVTDTGVGMTREELVK Unmodified 2111.1045 0.10448843 1002 P14625 HSP90B1 Endoplasmin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 3.38 2.6 1 2 4 1 4 3 1 81.254 78.523 3;4 1.3092E-40 95655 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 129.32 73.991 388000000 203830000 157170000 0 0 0 0 0 0 0 0 0 0 0 0 26994000 37845 1002 33778 315182;315183;315184;315185;315186;315187;315188;315189 249344;249345;249346;249347;249348;249349;249350 249349 6 NLLIFENLIDLK Unmodified 1443.8337 0.83371653 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 2 3 1 100.76 96.276 2 0.0021332 119875 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.43 98.473 80295000 37609000 41299000 1387200 0 0 0 0 0 0 0 0 0 0 0 0 37846 1986 33779 315190;315191;315192;315193;315194;315195 249351;249352;249353;249354 249353 4 NLLIQNKPGDDPNK Unmodified 1564.8209 0.82092001 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 3 24 1 1 1 2 2 2 2 2 2 2 2 2 2 2 2 38.235 37.812 2;3 1.259E-16 41188 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 94.023 79.766 804330000 50847000 27842000 20048000 30023000 38947000 44175000 47890000 71641000 41899000 68552000 52286000 85141000 87850000 68024000 69168000 37847 1364 33780 315196;315197;315198;315199;315200;315201;315202;315203;315204;315205;315206;315207;315208;315209;315210;315211;315212;315213;315214;315215;315216;315217;315218;315219;315220;315221;315222 249355;249356;249357;249358;249359;249360;249361;249362;249363;249364;249365;249366;249367;249368;249369;249370;249371;249372;249373;249374;249375;249376;249377;249378 249375 18 NLLLASPR Unmodified 882.5287 0.52870115 2297 Q13470 TNK1 Non-receptor tyrosine-protein kinase TNK1 yes yes 0 0 0 By MS/MS 10 0 1 1 53.884 53.959 2 0.034963 61316 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 52.786 7.7044 8486800 0 0 0 0 0 0 8486800 0 0 0 0 0 0 0 0 37848 2297 33781 315223 249379 249379 1 NLLLDELQK Unmodified 1084.6128 0.61282471 3513 Q8TEA1 NSUN6 Putative methyltransferase NSUN6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 77.085 76.943 2 0.026962 93681 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 69.198 13.667 35328000 0 0 4668900 1311000 1456500 2728100 2570400 2308800 1817200 3233400 3093000 2972000 1762100 2624200 4782200 37849 3513 33782 315224;315225;315226;315227;315228;315229;315230;315231;315232;315233;315234;315235;315236 249380;249381;249382 249382 3 NLLLEPSLEAK Unmodified 1225.6918 0.69180331 3434 Q8NEZ2 VPS37A Vacuolar protein sorting-associated protein 37A yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 79.496 75.925 2 0.0092105 91022 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 67.563 27.518 203120000 0 200480000 2634900 0 0 0 0 0 0 0 0 0 0 0 0 37850 3434 33783 315237;315238;315239 249383;249384 249383 2 NLLLLANSTEEQQK Unmodified 1599.8468 0.84680041 455 O75116 ROCK2 Rho-associated protein kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.56 3.86 3 1 5 1 2 1 1 1 1 1 1 75.203 73.11 2 5.4552E-31 92105 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 180.97 168.8 283270000 9782000 182420000 18280000 0 5359800 18460000 7300800 0 7849600 0 0 0 0 0 33820000 37851 455 33784 315240;315241;315242;315243;315244;315245;315246;315247;315248 249385;249386;249387;249388;249389;249390;249391;249392;249393;249394;249395 249387 11 NLLNLDVIK Unmodified 1040.623 0.62299547 3467 Q8NI36 WDR36 WD repeat-containing protein 36 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 83.034 83.097 2 0.012004 96180 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 61.962 13.459 75431000 0 0 0 1391600 2667000 5126800 3079300 5631000 5209000 7031200 10590000 9251400 5844700 6880100 12729000 37852 3467 33785 315249;315250;315251;315252;315253;315254;315255;315256;315257;315258;315259;315260;315261 249396;249397;249398;249399;249400;249401;249402;249403 249396 8 NLLPYSLR Unmodified 974.55492 0.5549159 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 73.507 73.568 2 0.0067278 84703 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 98.418 60.772 196590000 0 0 0 8311400 12563000 15941000 0 21527000 12973000 19934000 15676000 25521000 17904000 18191000 28045000 37853 3023 33786 315262;315263;315264;315265;315266;315267;315268;315269;315270;315271;315272 249404;249405;249406;249407;249408;249409;249410;249411;249412;249413 249410 10 NLLQEQLNSLSNDIK Unmodified 1727.9054 0.90537792 4266 Q9BZH6 WDR11 WD repeat-containing protein 11 yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 92.247 88.149 2;3 0.017709 109545 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 42.52 38.542 90177000 0 89620000 556750 0 0 0 0 0 0 0 0 0 0 0 0 37854 4266 33787 315273;315274;315275 249414;249415 249415 1 NLLQNIH Unmodified 850.4661 0.4661009 3866 Q96HE7 ERO1L ERO1-like protein alpha yes yes 0 0 0 By MS/MS 10 0 1 1 49.82 50.531 2 0.034267 56067 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.359 55.205 15904000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15904000 37855 3866 33788 315276 249416 249416 1 NLLQVDLTK Unmodified 1042.6023 0.60226003 1144;1056 P17612;P22694 PRKACA;PRKACB cAMP-dependent protein kinase catalytic subunit alpha;cAMP-dependent protein kinase catalytic subunit beta no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.459 71.53 2 0.0037422 81561 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 101.25 32.466 192760000 0 0 0 7389900 9803900 16701000 10565000 11167000 8960300 19525000 17623000 21474000 13502000 18564000 37482000 37856 1056;1144 33789 315277;315278;315279;315280;315281;315282;315283;315284;315285;315286;315287;315288 249417;249418;249419;249420;249421;249422;249423;249424;249425;249426;249427;249428 249419 12 NLLSDCSVVSTSLEDK Unmodified 1765.8404 0.8403944 631 O95235 KIF20A Kinesin-like protein KIF20A yes yes 0 0 0 By MS/MS 2 0 1 1 80.118 75.406 2 0.00051873 93943 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.494 79.033 41029000 0 41029000 0 0 0 0 0 0 0 0 0 0 0 0 0 37857 631 33790 315289 249429 249429 1 NLLSLGHNNIVR Unmodified 1348.7575 0.75753189 2111 Q05048 CSTF1 Cleavage stimulation factor subunit 1 yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 64.966 65.228 3 0.01186 73817 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.401 27.437 22553000 0 0 0 0 0 2489100 0 1854600 1441800 0 2308900 4704300 0 2444500 7309800 37858 2111 33791 315290;315291;315292;315293;315294;315295;315296 249430;249431 249431 2 NLLSTLK Unmodified 787.48035 0.48035398 2830 Q5VZ89 DENND4C DENN domain-containing protein 4C yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 67.037 59.931 2 0.045032 76457 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.616 0 102650000 54029000 48626000 0 0 0 0 0 0 0 0 0 0 0 0 0 37859 2830 33792 315297;315298 249432 249432 1 NLLSVAYK Unmodified 906.51747 0.51746776 1940;1882;1312;1869;1311;1214;2109 P62258;P61981;P27348;P31946;P31947;P63104;Q04917 YWHAE;YWHAG;YWHAQ;YWHAB;SFN;YWHAZ;YWHAH 14-3-3 protein epsilon;14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed;14-3-3 protein theta;14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein sigma;14-3-3 protein zeta/delta;14-3-3 protein eta no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.62 3.02 5 24 1 2 2 2 2 2 2 2 2 2 2 2 2 2 2 61.307 60.648 1;2 3.6533E-11 67953 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 190.51 62.668 6861100000 34088000 54503000 152670000 238110000 152700000 273440000 249000000 226650000 152710000 369500000 988580000 1007600000 269840000 675210000 2016500000 37860 1882;1869;1214;1311;1312;1940;2109 33793 315299;315300;315301;315302;315303;315304;315305;315306;315307;315308;315309;315310;315311;315312;315313;315314;315315;315316;315317;315318;315319;315320;315321;315322;315323;315324;315325;315326;315327 249433;249434;249435;249436;249437;249438;249439;249440;249441;249442;249443;249444;249445;249446;249447;249448;249449;249450;249451;249452;249453;249454;249455;249456;249457;249458;249459 249452 20 NLLTGETEADPEMIK Oxidation (M) 1675.7975 0.79746695 711 O96005 CLPTM1 Cleft lip and palate transmembrane protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 63.642 63.69 2 1.3247E-21 72686 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 117.94 102.67 65234000 0 0 0 7958900 5458700 5936300 4053300 4410200 6074900 6131200 8267800 5914800 5563100 5464300 0 37861 711 33794 315328;315329;315330;315331;315332;315333;315334;315335;315336;315337;315338 249460;249461;249462;249463;249464;249465;249466;249467;249468;249469;249470;249471 249462 855 12 NLLTGETEADPEMIK Unmodified 1659.8026 0.80255233 711 O96005 CLPTM1 Cleft lip and palate transmembrane protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.789 72.91 2 0.00064133 83965 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 80.69 34.084 64271000 0 0 0 0 3333000 6039400 3359400 3968600 5737400 8341100 8656600 8109700 4810100 4527200 7388600 37862 711 33794 315339;315340;315341;315342;315343;315344;315345;315346;315347;315348;315349;315350 249472;249473;249474;249475;249476;249477;249478;249479;249480;249481;249482;249483;249484 249482 13 NLLTPLMEK Unmodified 1057.5842 0.58416712 344 O43592 XPOT Exportin-T yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 77.568 76.396 2 0.0098768 88628 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 65.465 3.4661 79080000 0 56333000 0 1532900 0 0 0 0 0 0 4600400 0 0 0 16614000 37863 344 33795 315351;315352;315353;315354 249485;249486;249487;249488 249487 4 NLLTPLMEK Oxidation (M) 1073.5791 0.57908174 344 O43592 XPOT Exportin-T yes yes 0 1 0 By matching By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 64.304 64.287 2 0.030891 73243 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 42.864 25.479 19409000 0 0 0 0 1466300 6637000 0 0 0 6834100 4471500 0 0 0 0 37864 344 33795 315355;315356;315357;315358;315359 249489;249490 249490 2 NLLTVTSSDEMMK 2 Oxidation (M) 1499.6847 0.68474538 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.16 3.73 5 2 12 2 4 1 1 1 1 1 1 1 1 1 1 1 1 1 50.437 49.491 2 3.0687E-20 55886 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 155 136.94 1762700000 1798100 1142700000 0 39268000 35885000 42637000 48463000 27470000 44608000 54073000 70868000 77653000 73721000 49032000 54499000 37865 1986 33796 315360;315361;315362;315363;315364;315365;315366;315367;315368;315369;315370;315371;315372;315373;315374;315375;315376;315377;315378 249491;249492;249493;249494;249495;249496;249497;249498;249499;249500;249501;249502;249503;249504;249505;249506;249507;249508;249509;249510;249511;249512;249513 249509 3229;3230 22 NLLTVTSSDEMMK Oxidation (M) 1483.6898 0.68983076 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.85 3.52 8 1 24 2 5 2 2 2 2 2 2 2 2 2 3 2 1 2 62.137 60.458 2 1.0682E-12 69586 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 124.67 103.2 1967000000 38274000 1665200000 15953000 20788000 21132000 25217000 28196000 24195000 9993100 15197000 21271000 24118000 11900000 18709000 26846000 37866 1986 33796 315379;315380;315381;315382;315383;315384;315385;315386;315387;315388;315389;315390;315391;315392;315393;315394;315395;315396;315397;315398;315399;315400;315401;315402;315403;315404;315405;315406;315407;315408;315409;315410;315411 249514;249515;249516;249517;249518;249519;249520;249521;249522;249523;249524;249525;249526;249527;249528;249529;249530;249531;249532;249533;249534;249535;249536;249537;249538;249539;249540;249541;249542;249543;249544;249545;249546;249547;249548;249549;249550;249551;249552 249543 3229;3230 38 NLLTVTSSDEMMK Unmodified 1467.6949 0.69491614 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8 3.46 3 9 1 1 1 1 1 1 1 1 1 1 1 1 73.632 72.317 2 3.6296E-34 90745 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 178.08 166.92 1329500000 31684000 1143400000 7506000 8693100 12858000 29521000 6234000 16396000 11325000 19253000 26960000 0 15727000 0 0 37867 1986 33796 315412;315413;315414;315415;315416;315417;315418;315419;315420;315421;315422;315423 249553;249554;249555;249556;249557;249558;249559;249560;249561;249562;249563 249554 8 NLMASQPQLAK Oxidation (M) 1215.6282 0.6281572 2346 Q13835 PKP1 Plakophilin-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 35.303 35.232 2 0.00041518 38612 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 78.934 58.605 123030000 0 0 0 29045000 3370900 0 5558500 73778000 0 0 0 0 11279000 0 0 37868 2346 33797 315424;315425;315426;315427;315428;315429 249564;249565;249566;249567;249568;249569 249566 3819 6 NLMASQPQLAK Unmodified 1199.6332 0.63324258 2346 Q13835 PKP1 Plakophilin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 47.452 47.564 2 0.011932 54198 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 55.567 35.238 92618000 0 0 0 14502000 3136300 0 2560800 40441000 4178600 0 7711800 9368600 6450900 4268100 0 37869 2346 33797 315430;315431;315432;315433;315434;315435;315436;315437;315438 249570;249571;249572;249573;249574;249575;249576 249575 7 NLMCELDEDCEK Unmodified 1554.6 0.60002947 3859 Q96GX5 MASTL Serine/threonine-protein kinase greatwall yes yes 0 0 0 By MS/MS 2 0 1 1 65.129 59.211 2 3.9451E-13 75860 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.28 121.93 20278000 0 20278000 0 0 0 0 0 0 0 0 0 0 0 0 0 37870 3859 33798 315439 249577 249577 1 NLMEIVK Unmodified 845.46807 0.46807473 193 O14617 AP3D1 AP-3 complex subunit delta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 59.554 59.742 2 0.03326 66970 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.138 18.584 58446000 0 0 0 4429300 0 0 0 6647100 5338000 5678100 6815300 8388000 5093500 6100400 9956000 37871 193 33799 315440;315441;315442;315443;315444;315445;315446;315447;315448 249578 249578 1 NLMIETTEDTIK Unmodified 1406.6963 0.69629635 2 A0AV96 RBM47 RNA-binding protein 47 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.489 67.571 2 3.311E-08 77922 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 126.39 94.453 254970000 0 0 0 12091000 9022300 22892000 14640000 19725000 15521000 25827000 24208000 23870000 16214000 17121000 53837000 37872 2 33800 315449;315450;315451;315452;315453;315454;315455;315456;315457;315458;315459;315460 249579;249580;249581;249582;249583;249584;249585;249586;249587;249588;249589;249590;249591 249588 12 NLMIETTEDTIK Oxidation (M) 1422.6912 0.69121097 2 A0AV96 RBM47 RNA-binding protein 47 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 56.758 56.811 2 1.355E-05 64472 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 104.22 68.926 66576000 0 0 0 0 5946400 0 10633000 0 11269000 16533000 0 0 13693000 8501400 0 37873 2 33800 315461;315462;315463;315464;315465;315466;315467;315468;315469 249592;249593;249594;249595;249596;249597;249598;249599;249600;249601 249593 0 9 NLMIETTEDTIKK Oxidation (M) 1550.7862 0.78617399 2 A0AV96 RBM47 RNA-binding protein 47 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 10 0 4 2 1 1 46.036 46.361 3 0.00069832 51449 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 56.569 47.924 22298000 0 0 0 0 0 0 7247400 0 0 7406300 0 7644000 0 0 0 37874 2 33801 315470;315471;315472;315473 249602;249603;249604;249605 249605 0 3 NLMIETTEDTIKK Unmodified 1534.7913 0.79125936 2 A0AV96 RBM47 RNA-binding protein 47 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 56.948 57.073 3 0.0014582 65576 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 50.467 37.064 106010000 0 0 0 5919200 7201800 0 0 12944000 0 8404000 21192000 15450000 11438000 8487500 14974000 37875 2 33801 315474;315475;315476;315477;315478;315479;315480;315481;315482 249606;249607;249608;249609;249610;249611;249612;249613;249614 249614 9 NLMNAVVQTVK Oxidation (M) 1231.6595 0.65945733 1340;4922 P35221;Q9UI47 CTNNA1;CTNNA3 Catenin alpha-1;Catenin alpha-3 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.54 5 1 15 2 2 2 1 1 2 1 1 1 2 1 1 1 1 2 53.414 51.769 2 0.00025095 57566 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 87.258 44.344 295260000 70371000 48617000 18464000 6350800 7621400 32564000 9516300 6369600 6477500 30287000 13520000 13018000 10204000 7823300 14055000 37876 1340;4922 33802 315483;315484;315485;315486;315487;315488;315489;315490;315491;315492;315493;315494;315495;315496;315497;315498;315499;315500;315501;315502;315503 249615;249616;249617;249618;249619;249620;249621;249622;249623;249624;249625;249626;249627;249628 249617 2030 13 NLMNAVVQTVK Unmodified 1215.6645 0.66454271 1340;4922 P35221;Q9UI47 CTNNA1;CTNNA3 Catenin alpha-1;Catenin alpha-3 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76.695 75.717 2 2.4108E-05 86625 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 121.8 105.92 597010000 177510000 151110000 15218000 6583900 9966500 21644000 15150000 17216000 12968000 27180000 28675000 30255000 17599000 22631000 43311000 37877 1340;4922 33802 315504;315505;315506;315507;315508;315509;315510;315511;315512;315513;315514;315515;315516;315517;315518 249629;249630;249631;249632;249633;249634;249635;249636;249637;249638;249639;249640;249641;249642 249633 13 NLMPSAGK Oxidation (M) 832.41129 0.41128813 1492 P46013 MKI67 Antigen KI-67 yes yes 0 1 0 By MS/MS 10 0 1 1 10.367 10.539 2 0.044346 8915 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 42.914 15.777 2097200 0 0 0 0 0 0 0 0 2097200 0 0 0 0 0 0 37878 1492 33803 315519 249643 249643 1 NLMTSEIHNTVK Unmodified 1385.6973 0.6972994 311 O43264 ZW10 Centromere/kinetochore protein zw10 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 47.93 48.304 3 0.0040861 53241 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.359 35.469 36031000 0 0 0 0 0 11558000 0 0 0 0 0 0 9560600 0 14912000 37879 311 33804 315520;315521;315522 249644;249645;249646 249645 3 NLNEDDTFLVFSK Unmodified 1540.7409 0.74093835 4252 Q9BYT8 NLN Neurolysin, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 6.25 3.77 1 1 2 1 1 1 1 84.903 83.544 2 0.0039212 101126 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 70.977 46.185 18439000 0 5152100 3102300 0 0 1558100 0 0 0 0 0 0 0 0 8626500 37880 4252 33805 315523;315524;315525;315526 249647;249648;249649 249649 3 NLNEDTTFLPFTLQELGGLPEDFLNSLEK Unmodified 3293.6344 0.6343546 1704 P52888 THOP1 Thimet oligopeptidase yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 105.31 99.8 3 1.799E-11 124748 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.076 64.757 40375000 21333000 19042000 0 0 0 0 0 0 0 0 0 0 0 0 0 37881 1704 33806 315527;315528;315529 249650;249651 249650 2 NLNGILADEAGLGK Unmodified 1383.7358 0.73579339 3915 Q96L91 EP400 E1A-binding protein p400 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 77.565 77.196 2 2.1794E-23 95396 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.01 102.08 104320000 0 54049000 0 0 4149100 3821700 3851600 4900000 3257100 0 5414300 7803200 0 6313600 10758000 37882 3915 33807 315530;315531;315532;315533;315534;315535;315536;315537;315538;315539 249652;249653;249654;249655;249656 249652 5 NLNNSNLFSPVNR Unmodified 1487.7481 0.74808942 1707 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.684 65.769 2 7.3258E-08 74359 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 114.83 78.14 481550000 0 0 0 24954000 26360000 28581000 33229000 41256000 30889000 42040000 51319000 61042000 37529000 40952000 63404000 37883 1707 33808 315540;315541;315542;315543;315544;315545;315546;315547;315548;315549;315550;315551 249657;249658;249659;249660;249661;249662;249663;249664;249665;249666;249667;249668 249660 11 NLNNSNLFSPVNRDSENLASPSEYPENGER Unmodified 3362.54 0.53995372 1707 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 75.509 75.6 3 1.8234E-145 86821 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 159.56 151.9 115440000 0 0 0 0 5865000 7601500 0 15913000 12108000 18513000 0 19684000 0 0 35751000 37884 1707 33809 315552;315553;315554;315555;315556;315557;315558 249669;249670;249671;249672;249673;249674;249675 249671 7 NLNPVFGGSGPALTGLR Unmodified 1668.8948 0.89475365 1420 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 83.548 83.54 2 0.00039994 96769 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 63.76 49.602 14077000 0 0 0 0 1475600 2366300 0 0 0 0 0 0 0 0 10235000 37885 1420 33810 315559;315560;315561;315562 249676;249677;249678;249679 249676 4 NLNRCSVPVDQASESLLK Unmodified 2029.0262 0.026238111 4674 Q9NVN8 GNL3L Guanine nucleotide-binding protein-like 3-like protein yes yes 0 0 1 By MS/MS By matching 2 0 2 1 1 72.459 66.606 3 3.963E-10 87750 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 102.89 92.982 49812000 43646000 0 6165200 0 0 0 0 0 0 0 0 0 0 0 0 37886 4674 33811 315563;315564 249680;249681 249681 2 NLNSCLQQLK Unmodified 1216.6234 0.62340617 2155 Q08378 GOLGA3 Golgin subfamily A member 3 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 62.26 55.188 2 0.003036 71346 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.458 76.93 53793000 9777300 44016000 0 0 0 0 0 0 0 0 0 0 0 0 0 37887 2155 33812 315565;315566 249682;249683 249682 2 NLNSDDQAVVLK Unmodified 1314.6779 0.67794416 3008 Q6ZS17 FAM65A Protein FAM65A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 46.284 46.671 2 0.00057105 52521 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 93.111 64.024 42386000 0 0 0 0 0 0 0 0 0 8550700 9032400 9483300 9332200 5987700 0 37888 3008 33813 315567;315568;315569;315570;315571;315572 249684;249685;249686;249687;249688;249689 249685 6 NLNTSALQLEHEHLIK Unmodified 1858.9901 0.9901106 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 2 1 2 1 1 1 2 2 2 2 67.403 67.625 3;4 1.39E-08 76691 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 92.773 82.851 182020000 0 0 0 0 0 19034000 3125500 14695000 10397000 7271000 6507500 23773000 20979000 10777000 65458000 37889 2556 33814 315573;315574;315575;315576;315577;315578;315579;315580;315581;315582;315583;315584;315585;315586;315587;315588 249690;249691;249692;249693;249694;249695 249692 6 NLNVCESQSLDSGSCSALQNEFVSEK Unmodified 2901.2757 0.27566545 3196 Q86XK3 SFR1 Swi5-dependent recombination DNA repair protein 1 homolog yes yes 0 0 0 By MS/MS 3 0 1 1 79.724 76.392 3 0.012256 91659 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 23.44 16.329 3231800 0 3231800 0 0 0 0 0 0 0 0 0 0 0 0 0 37890 3196 33815 315589 249696 249696 1 NLNWTPAEVPQLAAAK Unmodified 1721.9101 0.91006937 3021 Q6ZW49 PAXIP1 PAX-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 83.719 83.849 2 2.096E-07 96862 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.64 72.349 39004000 0 0 0 0 0 4001300 0 3903800 0 5054700 3830100 5671800 4247600 4762300 7531900 37891 3021 33816 315590;315591;315592;315593;315594;315595;315596;315597 249697;249698;249699;249700;249701;249702;249703 249700 7 NLPCANVR Unmodified 942.47053 0.47053435 2769 Q5T1V6 DDX59 Probable ATP-dependent RNA helicase DDX59 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 29.712 29.85 2 0.033696 32287 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 53.554 29.582 22624000 0 0 0 0 2236400 2754400 1804700 1881200 2629800 3290800 0 0 0 3187800 4839500 37892 2769 33817 315598;315599;315600;315601;315602;315603;315604;315605 249704;249705;249706;249707 249705 4 NLPDEEIFQQLNQLNSLHQETIMK Oxidation (M) 2897.4229 0.42292204 4712 Q9NX08 COMMD8 COMM domain-containing protein 8 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 98.137 93.005 3 7.6974E-05 115134 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 56.72 43.532 46022000 11341000 33519000 1161400 0 0 0 0 0 0 0 0 0 0 0 0 37893 4712 33818 315606;315607;315608 249708 249708 6104 1 NLPDEEIFQQLNQLNSLHQETIMK Unmodified 2881.428 0.42800742 4712 Q9NX08 COMMD8 COMM domain-containing protein 8 yes yes 0 0 0 By MS/MS 2 0 1 1 98.388 93.654 3 2.1122E-05 115911 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 63.573 54.24 25891000 0 25891000 0 0 0 0 0 0 0 0 0 0 0 0 0 37894 4712 33818 315609 249709;249710 249709 2 NLPEEYELK Unmodified 1133.5605 0.56045479 1694 P52701 MSH6 DNA mismatch repair protein Msh6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 3 1 1 1 1 52.744 53.113 2 0.0033124 59503 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 93.429 67.323 165350000 0 0 0 0 0 27301000 0 0 8380800 0 34212000 26527000 0 28233000 40691000 37895 1694 33819 315610;315611;315612;315613;315614;315615;315616;315617 249711;249712;249713;249714;249715;249716;249717;249718;249719;249720 249720 10 NLPEGTERPPK Unmodified 1236.6463 0.64625011 3588 Q8WXE0 CASKIN2 Caskin-2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 22.134 22.137 3 0.031238 22151 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 48.188 48.188 50235000 0 0 0 8669800 8266300 0 12712000 0 10707000 0 0 0 0 9879400 0 37896 3588 33820 315618;315619;315620;315621;315622 249721;249722;249723;249724 249723 1 NLPEIMNITEVK Unmodified 1399.7381 0.73810158 5156 Q9Y3C4 TPRKB EKC/KEOPS complex subunit TPRKB yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 87.812 84.159 2 0.0012379 104608 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.441 69.17 275090000 0 272590000 2498000 0 0 0 0 0 0 0 0 0 0 0 0 37897 5156 33821 315623;315624 249725 249725 1 NLPENENNETGLENVINK Unmodified 2039.976 0.97597668 3246 Q8IWV7 UBR1 E3 ubiquitin-protein ligase UBR1 yes yes 0 0 0 By MS/MS 2 0 2 2 71.365 65.548 2;3 1.44E-14 83192 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.02 123.33 60306000 0 60306000 0 0 0 0 0 0 0 0 0 0 0 0 0 37898 3246 33822 315625;315626 249726;249727 249726 2 NLPFDFTWK Unmodified 1166.576 0.57604528 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 90.037 90.145 2 0.02741 104597 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 49.418 45.089 54017000 0 0 0 0 1857600 4799300 2037500 5395900 3025100 5004000 3354700 2728300 2608200 4280800 18926000 37899 1681 33823 315627;315628;315629;315630;315631;315632;315633;315634;315635;315636;315637 249728;249729;249730;249731 249728 4 NLPGLVQEGEPFSEEATLFTK Unmodified 2305.1478 0.14779303 3039 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 5 2 1 2 92.121 92.263 2;3 0.00017553 106896 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.607 54.43 12590000 0 0 0 0 0 0 0 0 0 4163900 1799500 0 0 0 6626900 37900 3039 33824 315638;315639;315640;315641;315642 249732;249733;249734;249735 249734 4 NLPIYSEEIVEMYK Oxidation (M) 1742.8437 0.84368886 1356 P35579 MYH9 Myosin-9 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.25 3.75 6 1 13 1 4 2 1 2 1 1 1 1 1 1 1 1 1 1 83.363 82.63 2;3 3.8877E-19 95352 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 131.43 114.9 1555000000 933850 619700000 21521000 11525000 69096000 76834000 39358000 72907000 68674000 134370000 100230000 119500000 39198000 59807000 121340000 37901 1356 33825 315643;315644;315645;315646;315647;315648;315649;315650;315651;315652;315653;315654;315655;315656;315657;315658;315659;315660;315661;315662 249736;249737;249738;249739;249740;249741;249742;249743;249744;249745;249746;249747;249748;249749;249750;249751;249752;249753;249754 249739 2086 18 NLPIYSEEIVEMYK Unmodified 1726.8488 0.84877424 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 3 1 1 1 1 1 1 1 1 1 1 1 88.632 87.556 2 1.0405E-07 101515 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 109.6 93.709 697830000 88362000 530280000 0 0 3199900 4240100 1952100 6249300 3670900 15024000 9007800 5681500 1329500 4053200 24783000 37902 1356 33825 315663;315664;315665;315666;315667;315668;315669;315670;315671;315672;315673;315674;315675;315676;315677 249755;249756;249757;249758;249759;249760;249761;249762;249763;249764;249765;249766;249767;249768;249769;249770;249771;249772 249760 18 NLPLADQGSSHHITVK Unmodified 1715.8955 0.89548193 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.97 2.68 4 27 1 1 2 4 1 2 1 4 2 3 1 2 4 1 2 45.315 44.741 2;3;4 3.0404E-19 50452 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 106.11 76.182 2493100000 164070000 55157000 38007000 458310000 58715000 151090000 78564000 520620000 105270000 126840000 93848000 216230000 218610000 59060000 148690000 37903 1029 33826 315678;315679;315680;315681;315682;315683;315684;315685;315686;315687;315688;315689;315690;315691;315692;315693;315694;315695;315696;315697;315698;315699;315700;315701;315702;315703;315704;315705;315706;315707;315708 249773;249774;249775;249776;249777;249778;249779;249780;249781;249782;249783;249784;249785;249786;249787;249788;249789;249790;249791;249792;249793;249794;249795;249796;249797;249798;249799;249800;249801;249802;249803;249804;249805;249806;249807;249808;249809;249810 249808 36 NLPLPPPPPPR Unmodified 1193.6921 0.69207809 1868 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 2 3 1 2 1 1 2 1 2 1 1 1 68.426 68.422 2;3 5.7562E-05 78352 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 131.06 60.143 986360000 0 0 0 41767000 40873000 79452000 64146000 39834000 37307000 132630000 97349000 129710000 68847000 89459000 164990000 37904 1868 33827 315709;315710;315711;315712;315713;315714;315715;315716;315717;315718;315719;315720;315721;315722;315723;315724;315725;315726 249811;249812;249813;249814;249815;249816;249817;249818;249819;249820;249821;249822;249823;249824;249825;249826;249827;249828;249829;249830;249831;249832;249833;249834;249835;249836;249837;249838;249839;249840;249841;249842;249843;249844;249845;249846;249847;249848;249849;249850;249851;249852;249853;249854;249855;249856;249857;249858;249859;249860;249861;249862;249863;249864;249865 249831 51 NLPLPPPPPPRGGDLMAYDR Oxidation (M) 2188.1099 0.10990816 1868 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes yes 0 1 1 By matching By MS/MS By MS/MS 10 0 3 1 1 1 75.743 75.744 3 0.00018333 86757 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 46.663 38.512 32690000 0 0 0 0 9001400 0 0 11862000 11826000 0 0 0 0 0 0 37905 1868 33828 315727;315728;315729 249866;249867 249866 3020 2 NLPLPPPPPPRGGDLMAYDRR Oxidation (M) 2344.211 0.21101919 1868 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes yes 0 1 2 By matching By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 71.509 71.578 4 1.1541E-05 81521 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.073 50.879 63942000 0 0 0 3553000 0 0 4943800 0 0 0 13736000 0 9052500 0 32656000 37906 1868 33829 315730;315731;315732;315733;315734 249868;249869 249868 3020 2 NLPLPPPPPPRGGDLMAYDRR Unmodified 2328.2161 0.21610457 1868 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes yes 0 0 2 By MS/MS 10 0 1 1 76.236 76.523 4 0.00011544 87813 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.865 45.596 12402000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12402000 37907 1868 33829 315735 249870;249871 249871 2 NLPNVIINEK Unmodified 1152.6503 0.65027285 4189 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.737 64.826 2 0.021365 74126 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 54.416 38.754 71782000 0 0 0 4534200 5125500 4547400 5667100 4678600 4251500 5964900 7909200 10094000 5731900 5715500 7562100 37908 4189 33830 315736;315737;315738;315739;315740;315741;315742;315743;315744;315745;315746;315747 249872;249873;249874;249875;249876;249877;249878;249879 249872 8 NLPPEEQMISALPDIK Unmodified 1793.9233 0.92333617 275 O15355 PPM1G Protein phosphatase 1G yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.24 3.75 5 1 11 1 3 2 1 1 1 1 1 1 1 1 1 1 1 88.39 86.925 2;3 1.0451E-10 107944 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 139.78 108.35 2479800000 20705000 2380300000 9003600 0 1837400 2527400 1643700 4064100 2615700 6903900 8323200 6795600 4567900 6179500 24335000 37909 275 33831 315748;315749;315750;315751;315752;315753;315754;315755;315756;315757;315758;315759;315760;315761;315762;315763;315764 249880;249881;249882;249883;249884;249885;249886;249887;249888;249889;249890;249891;249892;249893;249894;249895;249896;249897 249883 17 NLPPEEQMISALPDIK Oxidation (M) 1809.9183 0.91825079 275 O15355 PPM1G Protein phosphatase 1G yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 79.218 78.244 2 0.0012517 90313 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.632 33.742 322990000 0 280270000 3046200 0 2919700 0 0 0 5315700 0 0 10378000 0 8819200 12235000 37910 275 33831 315765;315766;315767;315768;315769;315770;315771 249898;249899 249899 363 2 NLPPLTEAQK Unmodified 1109.6081 0.60807369 4863 Q9UBW8 COPS7A COP9 signalosome complex subunit 7a yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 46.097 46.433 2 0.0066319 52547 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 64.42 16.567 47748000 0 0 0 0 0 0 0 0 0 0 0 0 47748000 0 0 37911 4863 33832 315772;315773 249900;249901 249901 2 NLPPSGAVPVTGIPPHVVK Unmodified 1878.0727 0.072718018 2263 Q13283 G3BP1 Ras GTPase-activating protein-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.33 6 2 25 2 4 2 2 2 2 3 2 1 2 2 2 1 3 3 75.902 74.814 2;3 1.3927E-05 96297 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.872 66.028 1594700000 471830000 456780000 68545000 41207000 47801000 63355000 58349000 41910000 39423000 64464000 57437000 60483000 23239000 35663000 64160000 37912 2263 33833 315774;315775;315776;315777;315778;315779;315780;315781;315782;315783;315784;315785;315786;315787;315788;315789;315790;315791;315792;315793;315794;315795;315796;315797;315798;315799;315800;315801;315802;315803;315804;315805;315806 249902;249903;249904;249905;249906;249907;249908;249909;249910;249911;249912;249913;249914;249915;249916;249917;249918;249919;249920;249921;249922;249923;249924;249925;249926;249927;249928;249929;249930;249931;249932;249933;249934;249935;249936;249937;249938;249939;249940;249941;249942;249943;249944;249945;249946;249947;249948;249949;249950;249951;249952;249953;249954;249955;249956;249957;249958;249959;249960;249961;249962;249963;249964;249965;249966;249967 249932 61 NLPQAVASVK Unmodified 1025.5869 0.58694431 5104 Q9Y2I7 PIKFYVE 1-phosphatidylinositol 3-phosphate 5-kinase yes yes 0 0 0 By MS/MS 2 0 1 1 52.061 46.287 2 0.039938 60034 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 55.064 16.101 32047000 0 32047000 0 0 0 0 0 0 0 0 0 0 0 0 0 37913 5104 33834 315807 249968 249968 1 NLPQDSNCQEVHDLLK Unmodified 1908.9 0.89997496 4516 Q9HCJ3 RAVER2 Ribonucleoprotein PTB-binding 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 61.846 61.484 3 2.9234E-05 69365 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.85 51.915 169730000 0 50360000 0 4378000 8198600 8721800 5446200 14789000 6990800 10630000 14701000 14491000 9060300 10148000 11813000 37914 4516 33835 315808;315809;315810;315811;315812;315813;315814;315815;315816;315817;315818;315819;315820 249969;249970;249971;249972;249973;249974;249975;249976;249977 249973 8 NLPQSVIENVGGK Unmodified 1353.7252 0.72522871 1644 P51003 PAPOLA Poly(A) polymerase alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.08 3.33 2 1 9 2 1 1 1 1 1 1 1 1 1 1 68.448 67.476 2 5.7463E-21 85642 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 133.44 105.04 230820000 0 181700000 2223000 0 0 8657700 4488500 3118500 0 5935600 3742300 5968600 2992100 3500700 8499000 37915 1644 33836 315821;315822;315823;315824;315825;315826;315827;315828;315829;315830;315831;315832 249978;249979;249980;249981;249982;249983;249984;249985;249986;249987;249988;249989;249990;249991 249982 13 NLPSLFK Unmodified 817.46979 0.46978929 4491 Q9HAV4 XPO5 Exportin-5 yes yes 0 0 0 By MS/MS 2 0 1 1 79.001 70.871 2 0.036349 92986 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.614 43.853 284290000 284290000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37916 4491 33837 315833 249992 249992 1 NLPSSAQPFIPK Unmodified 1297.703 0.7030367 2810 Q5VT52 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.521 69.596 2 7.9452E-05 79165 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 89.08 49.931 397170000 0 0 0 19760000 24296000 24679000 30522000 26774000 22729000 38907000 38145000 51766000 45253000 32057000 42281000 37917 2810 33838 315834;315835;315836;315837;315838;315839;315840;315841;315842;315843;315844;315845 249993;249994;249995;249996;249997;249998;249999;250000;250001;250002;250003;250004;250005;250006 250003 14 NLPSYPGPSK Unmodified 1058.5397 0.53965977 2420 Q14644 RASA3 Ras GTPase-activating protein 3 yes yes 0 0 0 By MS/MS 2 0 1 1 44.679 39.459 2 0.02351 51258 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.731 55.311 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37918 2420 33839 315846 250007 250007 1 NLPVDMQLK Unmodified 1056.5638 0.56376603 3806 Q96EA4 SPDL1 Protein Spindly yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 66.689 66.839 2 0.031872 75763 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.574 15.639 24558000 0 0 0 1267500 0 0 2071800 0 0 2910700 3268600 3008700 2290200 3399400 6340600 37919 3806 33840 315847;315848;315849;315850;315851;315852;315853;315854 250008;250009;250010 250008 3 NLPVFQPGVK Unmodified 1097.6233 0.62332982 5058 Q9UPT5 EXOC7 Exocyst complex component 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.8 3.12 3 1 1 2 1 1 1 74.176 68.945 2 0.0092498 89508 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.774 41.966 129990000 61387000 65294000 3305300 0 0 0 0 0 0 0 0 0 0 0 0 37920 5058 33841 315855;315856;315857;315858;315859 250011;250012;250013;250014 250012 4 NLPVPVYLRPLDEK Unmodified 1651.9297 0.92974218 391 O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 83.785 82.745 3 0.00040454 95529 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.805 61.279 73945000 39308000 0 0 0 0 2653600 0 0 1771900 2788200 2613300 2283600 0 0 22526000 37921 391 33842 315860;315861;315862;315863;315864;315865;315866 250015;250016;250017;250018;250019 250017 5 NLPYVYIPSK Unmodified 1192.6492 0.64921022 4714 Q9NX24 NHP2 H/ACA ribonucleoprotein complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.828 76.888 2 0.0077744 88613 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 61.65 41.13 162670000 0 0 0 6711000 9558700 11229000 12174000 10502000 8928800 15145000 15441000 16314000 11451000 13133000 32081000 37922 4714 33843 315867;315868;315869;315870;315871;315872;315873;315874;315875;315876;315877;315878 250020;250021;250022;250023;250024;250025;250026 250025 7 NLQAEGLTTLGQSLR Unmodified 1599.858 0.8580338 4982 Q9UL03 INTS6 Integrator complex subunit 6 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 78.972 79.025 2 1.3869E-05 91768 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 95.018 68.504 71104000 0 0 0 1481400 4338700 6210500 4672600 6677800 5455600 7308900 6708300 11830000 6390200 0 10029000 37923 4982 33844 315879;315880;315881;315882;315883;315884;315885;315886;315887;315888;315889 250027;250028;250029;250030;250031 250030 5 NLQDAMQVCR Oxidation (M) 1249.5543 0.55434033 1570 P49368 CCT3 T-complex protein 1 subunit gamma yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 24.377 24.623 2 0.0003298 24717 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 124.98 108.31 284850000 0 0 0 0 13259000 28708000 20414000 0 17610000 24673000 31752000 40946000 41714000 23268000 42501000 37924 1570 33845 315890;315891;315892;315893;315894;315895;315896;315897;315898;315899 250032;250033;250034;250035;250036;250037;250038;250039;250040;250041;250042;250043;250044;250045 250042 2519 14 NLQDAMQVCR Unmodified 1233.5594 0.55942571 1570 P49368 CCT3 T-complex protein 1 subunit gamma yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 46.142 46.321 2 0.0088618 52082 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 68.016 55.79 692090000 0 0 0 54042000 0 83026000 43807000 0 46054000 73106000 98440000 0 70169000 77436000 146010000 37925 1570 33845 315900;315901;315902;315903;315904;315905;315906;315907;315908 250046;250047;250048;250049 250046 4 NLQDGQISDTGDLGEDIASN Unmodified 2060.9134 0.913436 3101 Q7Z4S6 KIF21A Kinesin-like protein KIF21A yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 74.74 74.787 2 0.00021704 86358 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 65.805 62.767 43959000 0 0 0 2195200 3750000 0 3413600 0 0 5758000 7211900 6684300 4141800 3841400 6963000 37926 3101 33846 315909;315910;315911;315912;315913;315914;315915;315916;315917 250050;250051;250052;250053;250054 250052 5 NLQDPFYPR Unmodified 1148.5615 0.56145784 3811 Q96EI5;Q9H3H9 TCEAL4;TCEAL2 Transcription elongation factor A protein-like 4;Transcription elongation factor A protein-like 2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 65.713 65.681 2 0.0044493 74867 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 86.794 51.97 67866000 0 0 0 7349000 8561900 7860600 6709000 8397800 5006900 8544600 0 0 7674900 7761800 0 37927 3811 33847 315918;315919;315920;315921;315922;315923;315924;315925;315926 250055;250056;250057;250058;250059;250060;250061;250062;250063;250064 250059 10 NLQDVVER Unmodified 971.50361 0.50360861 1613 P49916 LIG3 DNA ligase 3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 39.501 39.36 2 0.021412 43671 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 61.999 5.9886 12229000 0 0 0 2661100 2441400 0 2976200 0 0 0 0 0 4150400 0 0 37928 1613 33848 315927;315928;315929;315930 250065;250066 250065 2 NLQEAEEWYK Unmodified 1308.5986 0.59863121 870 P08670;P41219 VIM;PRPH Vimentin;Peripherin yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.58 8 21 2 4 2 2 2 1 2 2 1 2 1 1 3 2 2 61.177 60.491 2 9.256E-13 67584 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 164.57 151.59 6484800000 50736000 2564700000 33976000 191350000 247540000 350370000 312960000 343770000 244850000 285920000 339470000 426230000 290030000 315860000 487060000 37929 870 33849 315931;315932;315933;315934;315935;315936;315937;315938;315939;315940;315941;315942;315943;315944;315945;315946;315947;315948;315949;315950;315951;315952;315953;315954;315955;315956;315957;315958;315959 250067;250068;250069;250070;250071;250072;250073;250074;250075;250076;250077;250078;250079;250080;250081;250082;250083;250084;250085;250086;250087;250088;250089;250090;250091;250092;250093;250094;250095;250096;250097;250098;250099;250100;250101;250102;250103;250104;250105;250106;250107;250108;250109;250110 250096 43 NLQEGLQSK Unmodified 1015.5298 0.52982336 4288 Q9C0D5 TANC1 Protein TANC1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.661 22.885 2 0.0039848 23785 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 88.294 50.056 85682000 0 0 0 4676400 4800100 6551900 0 5325100 4584800 8355600 10195000 16048000 8095400 9928600 7121600 37930 4288 33850 315960;315961;315962;315963;315964;315965;315966;315967;315968;315969;315970;315971 250111;250112;250113;250114;250115;250116;250117 250114 6 NLQEGNEVDSQSSIR Unmodified 1674.7809 0.78090569 464 O75152 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.822 35.004 2 8.0177E-50 37479 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 205.46 184.09 196990000 0 0 0 9322700 9128700 16612000 15086000 12615000 11347000 13831000 19310000 20859000 19869000 18603000 30405000 37931 464 33851 315972;315973;315974;315975;315976;315977;315978;315979;315980;315981;315982;315983 250118;250119;250120;250121;250122;250123;250124;250125;250126;250127;250128;250129;250130 250122 13 NLQEGNEVDSQSSIRTEAK Unmodified 2104.0033 0.0032540621 464 O75152 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 34.816 34.096 3 2.5403E-74 37641 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 170.91 154.03 318320000 0 40598000 3217900 12104000 17881000 17065000 21085000 17149000 19981000 21302000 28383000 42217000 21047000 16470000 39817000 37932 464 33852 315984;315985;315986;315987;315988;315989;315990;315991;315992;315993;315994;315995;315996;315997;315998 250131;250132;250133;250134;250135;250136;250137;250138;250139;250140;250141;250142;250143;250144;250145;250146;250147 250140 17 NLQEGQVTDPR Unmodified 1255.6157 0.61567826 3635 Q92600 RQCD1 Cell differentiation protein RCD1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.525 28.72 2 6.7542E-09 30794 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 151.22 137.1 346790000 0 0 0 17158000 20091000 26182000 25437000 25704000 20034000 33844000 37220000 37864000 34271000 29052000 39930000 37933 3635 33853 315999;316000;316001;316002;316003;316004;316005;316006;316007;316008;316009;316010 250148;250149;250150;250151;250152;250153;250154;250155;250156;250157;250158;250159;250160;250161 250152 14 NLQEGQVTDPRGIPLPPQ Unmodified 1958.0221 0.022139011 3635 Q92600 RQCD1 Cell differentiation protein RCD1 homolog yes yes 0 0 1 By MS/MS 2 0 1 1 79.214 74.479 2 0.00058005 92402 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.204 70.643 53629000 0 53629000 0 0 0 0 0 0 0 0 0 0 0 0 0 37934 3635 33854 316011 250162 250162 1 NLQEIEEK Unmodified 1001.5029 0.50293991 5315 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 2 1 1 1 1 2 1 1 1 1 1 1 35.274 35.406 2 0.022757 39558 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 60.895 16.203 + 563440000 0 0 0 40211000 19406000 45981000 31630000 28110000 44584000 49288000 59838000 58503000 38005000 45062000 102830000 37935 5315 33855 316012;316013;316014;316015;316016;316017;316018;316019;316020;316021;316022;316023;316024;316025 250163;250164 250164 2 NLQEIQQAGER Unmodified 1284.6422 0.64222736 3311 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.703 34.886 2 2.2344E-11 37716 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 178.22 67.35 459830000 0 0 0 25953000 16871000 36077000 31352000 32247000 31250000 43379000 46004000 47998000 49692000 37515000 61488000 37936 3311 33856 316026;316027;316028;316029;316030;316031;316032;316033;316034;316035;316036;316037 250165;250166;250167;250168;250169;250170;250171;250172;250173;250174;250175;250176 250174 12 NLQEQTVQLQSELSR Unmodified 1771.9064 0.90644055 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 2 1 2 1 2 2 2 2 2 2 2 72.525 72.656 2;3 5.6432E-191 83609 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 227.48 185.24 523290000 0 0 0 0 26389000 18216000 40081000 12374000 35352000 78603000 50952000 61044000 36949000 70452000 92881000 37937 965 33857 316038;316039;316040;316041;316042;316043;316044;316045;316046;316047;316048;316049;316050;316051;316052;316053;316054;316055;316056;316057 250177;250178;250179;250180;250181;250182;250183;250184;250185;250186;250187;250188;250189;250190;250191;250192;250193;250194;250195;250196;250197;250198 250194 22 NLQEVLGEEK Unmodified 1157.5928 0.59281755 1740 P54577 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 53.271 53.41 2 0.000517 59032 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 126.07 61.03 361560000 0 0 0 14652000 12354000 31345000 19076000 14125000 0 31527000 43238000 34314000 29158000 41070000 90699000 37938 1740 33858 316058;316059;316060;316061;316062;316063;316064;316065;316066;316067;316068;316069 250199;250200;250201;250202;250203;250204;250205;250206;250207;250208;250209;250210;250211 250202 13 NLQGFLEQPK Unmodified 1172.619 0.61897272 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67.15 66.387 2 0.0024208 75079 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.783 29.233 130030000 7382500 0 12041000 4290900 4431700 10522000 7422100 5915600 5133000 10148000 11306000 14516000 8993500 10788000 17143000 37939 2775 33859 316070;316071;316072;316073;316074;316075;316076;316077;316078;316079;316080;316081;316082;316083 250212;250213;250214;250215;250216;250217 250213 6 NLQLALANSSR Unmodified 1185.6466 0.64658446 3621 Q92547 TOPBP1 DNA topoisomerase 2-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 2 1 1 1 1 1 57.487 57.68 2 0.00047061 65793 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 84.213 53.958 31877000 0 0 0 0 5283900 0 5559900 0 0 0 0 12093000 0 0 8939700 37940 3621 33860 316084;316085;316086;316087;316088;316089;316090;316091;316092;316093 250218;250219;250220;250221;250222;250223;250224;250225;250226;250227 250219 10 NLQMWEEMK Oxidation (M) 1223.5315 0.53147962 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 7 3.87 6 10 2 2 2 1 1 1 1 1 1 1 1 1 1 61.34 59.209 2 0.0008932 77264 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 141.52 134.69 185130000 4938300 101570000 41911000 0 2011100 3633800 2543100 2307500 2901400 2915000 4603800 4181000 0 4120600 7488500 37941 848 33861 316094;316095;316096;316097;316098;316099;316100;316101;316102;316103;316104;316105;316106;316107;316108;316109 250228;250229;250230;250231;250232 250231 1058;1059 5 NLQMWEEMK Unmodified 1207.5366 0.536565 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.27 3.99 7 8 1 4 2 1 1 1 1 1 1 1 1 72.789 70.989 2 0.00094538 89964 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 143.01 127.13 573390000 6880300 498970000 23872000 0 0 4385200 0 2280000 0 3276500 4571800 3420300 2769400 5408100 17556000 37942 848 33861 316110;316111;316112;316113;316114;316115;316116;316117;316118;316119;316120;316121;316122;316123;316124 250233;250234;250235;250236;250237;250238;250239;250240;250241 250234 8 NLQMWEEMK 2 Oxidation (M) 1239.5264 0.52639425 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 2 0 By MS/MS By MS/MS 2 0 2 1 1 47.568 42.818 2 0.0058847 54348 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 114.28 105.94 111390000 0 90781000 20613000 0 0 0 0 0 0 0 0 0 0 0 0 37943 848 33861 316125;316126 250242;250243 250243 1058;1059 1 NLQNLLILTAIK Unmodified 1352.8391 0.83913625 2040;1723 P53675;Q00610 CLTCL1;CLTC Clathrin heavy chain 2;Clathrin heavy chain 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 94.482 94.614 2 0.00033522 109764 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.865 63.553 12380000 0 0 0 0 0 677300 0 553720 0 1170700 1558900 0 0 677120 7742700 37944 1723;2040 33862 316127;316128;316129;316130;316131;316132 250244 250244 1 NLQNVDMK Unmodified 960.46987 0.46986564 1031 P16070 CD44 CD44 antigen yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 26.417 26.622 2 0.022922 28306 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 60.76 23.114 52185000 0 0 0 2364400 4447800 3966900 0 3835300 4199200 4769100 7123800 7945300 6711200 0 6822400 37945 1031 33863 316133;316134;316135;316136;316137;316138;316139;316140;316141;316142 250245;250246 250246 2 NLQNVDMK Oxidation (M) 976.46478 0.46478027 1031 P16070 CD44 CD44 antigen yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 12.935 13.191 2 0.013577 12038 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 62.659 35.134 11249000 0 0 0 0 1296800 0 0 0 0 2294400 1884700 3382900 0 0 2390200 37946 1031 33863 316143;316144;316145;316146;316147 250247;250248;250249 250248 1455 3 NLQSEVEGVK Unmodified 1101.5666 0.5666028 4175 Q9BV40 VAMP8 Vesicle-associated membrane protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 43.37 43.297 2 0.0042378 48439 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 73.573 38.372 28950000 0 0 0 5755300 3850600 0 5155400 6570900 0 0 7617600 0 0 0 0 37947 4175 33864 316148;316149;316150;316151;316152 250250;250251;250252;250253;250254;250255 250252 6 NLQSFGTEEPAYSTR Unmodified 1698.7849 0.78492843 635 O95251 KAT7 Histone acetyltransferase KAT7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 56.874 57.248 2 2.9112E-14 64988 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 119.76 54.263 20666000 0 0 0 0 0 0 0 0 0 4343800 6972300 9349600 0 0 0 37948 635 33865 316153;316154;316155 250256;250257;250258 250257 3 NLQSVVLSK Unmodified 986.57605 0.57604528 1474 P43246 MSH2 DNA mismatch repair protein Msh2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 57.126 51.144 2 0.016678 63824 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 101.64 38.164 1712000000 788740000 892120000 31127000 0 0 0 0 0 0 0 0 0 0 0 0 37949 1474 33866 316156;316157;316158 250259;250260;250261 250261 2 NLQTVNVDEN Unmodified 1144.536 0.53603095 1926 P62899 RPL31 60S ribosomal protein L31 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.31 2.4 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 45.361 45.93 2 2.8818E-11 45430 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 160.11 147.28 633210000 6658000 0 0 54003000 41512000 49134000 58558000 29125000 41402000 57942000 61553000 69017000 55147000 45772000 63389000 37950 1926 33867 316159;316160;316161;316162;316163;316164;316165;316166;316167;316168;316169;316170;316171 250262;250263;250264;250265;250266;250267;250268;250269;250270;250271;250272;250273;250274 250266 12 NLQVVETSAR Unmodified 1115.5935 0.59348625 4615 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 2 1 1 36.208 36.638 2 0.011712 40565 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 53.756 16.029 26209000 0 0 0 0 0 3425100 0 0 0 3067000 6587700 4990800 0 0 8137900 37951 4615 33868 316172;316173;316174;316175;316176;316177 250275;250276 250275 2 NLQYYDISAK Unmodified 1213.5979 0.59790293 1912 P62826 RAN GTP-binding nuclear protein Ran yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.41 3.95 1 7 2 12 3 5 2 1 1 1 1 1 1 1 1 1 1 1 1 59.582 58.039 2 0.00087638 62512 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 118.26 76.285 8672100000 730060000 5829900000 178550000 58523000 46441000 60608000 73289000 66167000 47909000 86305000 270360000 296700000 68996000 202990000 655300000 37952 1912 33869 316178;316179;316180;316181;316182;316183;316184;316185;316186;316187;316188;316189;316190;316191;316192;316193;316194;316195;316196;316197;316198;316199 250277;250278;250279;250280;250281;250282;250283;250284;250285;250286;250287;250288;250289;250290;250291;250292;250293;250294;250295;250296;250297;250298;250299;250300;250301;250302;250303;250304;250305;250306;250307;250308;250309;250310;250311;250312 250278 35 NLRDIDEVSSLLR Unmodified 1528.8209 0.82092001 1641 P50990 CCT8 T-complex protein 1 subunit theta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 80.679 80.817 3 2.2574E-08 92966 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 106.32 84.125 82852000 0 0 0 0 0 5860400 0 0 7208400 7216800 6872600 3872000 0 5005800 46816000 37953 1641 33870 316200;316201;316202;316203;316204;316205;316206 250313;250314;250315;250316;250317;250318 250315 6 NLREPIGPDQR Unmodified 1293.6789 0.67894722 165 O00512 BCL9 B-cell CLL/lymphoma 9 protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 31.333 31.514 3 0.0080102 33091 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 35.077 23.864 85653000 0 0 0 6254000 5577700 0 6724300 6869200 0 10034000 0 15099000 8794300 8939500 17361000 37954 165 33871 316207;316208;316209;316210;316211;316212;316213;316214;316215 250319;250320;250321;250322;250323;250324 250321 6 NLRPGDSQTAAQAR Unmodified 1483.7492 0.74915205 3606 Q8WZA9 IRGQ Immunity-related GTPase family Q protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 15.28 15.451 3 0.00035138 14875 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 55.841 42.178 53208000 0 0 0 2157600 1403400 4061700 3224600 0 1267500 4266800 8246400 6796300 5846300 5019000 10919000 37955 3606 33872 316216;316217;316218;316219;316220;316221;316222;316223;316224;316225;316226 250325;250326;250327;250328;250329;250330;250331 250326 7 NLRVGNGFEEGTTQGPLINEK Unmodified 2272.1448 0.14477334 1666 P51649 ALDH5A1 Succinate-semialdehyde dehydrogenase, mitochondrial yes yes 0 0 1 By MS/MS 2 0 1 1 75.37 67.239 3 4.0986E-10 88706 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.659 79.443 19490000 19490000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37956 1666 33873 316227 250332 250332 1 NLRVNAGDQPGADLGPLITPQAK Unmodified 2344.2499 0.24990712 2073 Q02252 ALDH6A1 Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial yes yes 0 0 1 By MS/MS 2 0 1 1 82.573 74.442 3 0.00020567 97509 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.036 52.044 7137600 7137600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37957 2073 33874 316228 250333 250333 1 NLSAQCQEVRK Unmodified 1331.6616 0.66158259 2379 Q14155 ARHGEF7 Rho guanine nucleotide exchange factor 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 19.227 15.633 3 0.00014571 19887 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 87.184 58.379 68101000 19727000 22654000 25720000 0 0 0 0 0 0 0 0 0 0 0 0 37958 2379 33875 316229;316230;316231 250334;250335 250335 2 NLSDLIDLVPSLCEDLLSSVDQPLK Unmodified 2782.431 0.43102711 1525 P47756 CAPZB F-actin-capping protein subunit beta yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 104.76 99.245 3 3.7805E-25 120648 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 93.767 90.121 37860000 11404000 26456000 0 0 0 0 0 0 0 0 0 0 0 0 0 37959 1525 33876 316232;316233;316234 250336;250337;250338;250339 250338 4 NLSDVATK Unmodified 846.4447 0.44469675 1010 P14923 JUP Junction plakoglobin yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 19.176 19.345 2 0.010711 19366 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 78.77 30.922 494840000 0 0 0 106870000 27810000 32036000 24941000 129660000 18823000 39136000 0 43685000 53634000 16265000 1970900 37960 1010 33877 316235;316236;316237;316238;316239;316240;316241;316242;316243;316244;316245 250340;250341;250342;250343;250344;250345 250343 6 NLSDVATKQEGLESVLK Unmodified 1829.9735 0.97345748 1010 P14923 JUP Junction plakoglobin yes yes 0 0 1 By MS/MS 10 0 1 1 73.228 73.412 3 1.2718E-06 84474 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 80.609 62.014 28422000 0 0 0 0 0 0 0 28422000 0 0 0 0 0 0 0 37961 1010 33878 316246 250346 250346 1 NLSEALGDNVK Unmodified 1158.5881 0.58806652 3760 Q96BN2 TADA1 Transcriptional adapter 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 6 1 1 1 1 1 1 46.317 46.634 2 0.0099348 52502 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 50.034 7.7462 30326000 0 0 0 0 0 0 3472800 0 2489800 5854600 7918400 7374800 3215700 0 0 37962 3760 33879 316247;316248;316249;316250;316251;316252 250347;250348;250349 250347 3 NLSEAQLR Unmodified 929.49304 0.49304393 4781 Q9NZT1 CALML5 Calmodulin-like protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.419 29.612 2 0.0043522 32560 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 111.01 58.324 804440000 0 0 0 274670000 80913000 30423000 33482000 103360000 16729000 38332000 50615000 98274000 42655000 29635000 5346600 37963 4781 33880 316253;316254;316255;316256;316257;316258;316259;316260;316261;316262;316263;316264 250350;250351;250352;250353;250354;250355;250356;250357 250357 7 NLSEAQLRK Unmodified 1057.588 0.58800695 4781 Q9NZT1 CALML5 Calmodulin-like protein 5 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.412 20.614 2 0.0019957 20810 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 130.27 74.595 4914700000 0 0 0 2073500000 431130000 126600000 137580000 573290000 50528000 199420000 306850000 480610000 215330000 157720000 162150000 37964 4781 33881 316265;316266;316267;316268;316269;316270;316271;316272;316273;316274;316275;316276 250358;250359;250360;250361;250362;250363;250364;250365 250361 5 NLSEEGLLR Unmodified 1029.5455 0.54547343 2189 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 53.116 53.331 2 0.0035031 60378 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 103.56 58.482 29984000 0 0 0 0 0 0 0 0 8175300 0 0 0 21808000 0 0 37965 2189 33882 316277;316278 250366;250367 250367 2 NLSESPVITK Unmodified 1086.5921 0.59208927 2195 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 39.659 38.912 2 0.0030867 49151 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.033 44.867 147150000 0 77546000 0 6085600 6276600 7580200 7218400 5532100 5207300 8551700 0 10610000 5809700 6729600 0 37966 2195 33883 316279;316280;316281;316282;316283;316284;316285;316286;316287;316288;316289;316290 250368;250369;250370;250371;250372;250373;250374 250369 5 NLSEVPQCVWR Unmodified 1386.6714 0.671419 4468 Q9H9A6 LRRC40 Leucine-rich repeat-containing protein 40 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 70.311 70.35 2 0.0029449 80870 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 65.347 45.585 144300000 0 0 0 6618900 7915800 12628000 7118800 9862700 11405000 14941000 18579000 24501000 14531000 16195000 0 37967 4468 33884 316291;316292;316293;316294;316295;316296;316297;316298;316299;316300;316301 250375;250376;250377;250378;250379;250380;250381 250375 7 NLSFEEGNVK Unmodified 1135.551 0.55095274 2852 Q68CP9 ARID2 AT-rich interactive domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 46.046 46.208 2 0.0063013 51771 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 65.474 41.319 93368000 0 0 0 4853100 6763300 10021000 5383700 9768000 4546100 8203400 7826800 10090000 11869000 0 14044000 37968 2852 33885 316302;316303;316304;316305;316306;316307;316308;316309;316310;316311;316312 250382;250383;250384;250385;250386;250387;250388;250389;250390;250391 250387 10 NLSFNELYPSGTLK Unmodified 1581.8039 0.80387296 3601 Q8WYP5 AHCTF1 Protein ELYS yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 82.024 82.116 2 0.0014962 95230 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.885 34.344 20838000 0 0 0 0 1335300 3054000 1426100 2941400 1915200 0 3745700 3987000 2433100 0 0 37969 3601 33886 316313;316314;316315;316316;316317;316318;316319;316320;316321 250392;250393;250394;250395;250396;250397;250398 250398 7 NLSGQPNFPCR Unmodified 1288.5983 0.59825406 4528 Q9HD45 TM9SF3 Transmembrane 9 superfamily member 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 45.539 45.719 2 0.0018532 51164 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 90.601 78.375 90568000 0 0 0 4735900 4913700 0 5014600 7673100 3661700 6637700 9155500 13303000 8758800 12805000 13908000 37970 4528 33887 316322;316323;316324;316325;316326;316327;316328;316329;316330;316331;316332 250399;250400;250401;250402;250403;250404 250400 6 NLSLSQQLK Unmodified 1029.5819 0.58185893 3844 Q96G03 PGM2 Phosphoglucomutase-2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 56.349 49.351 2 0.0053335 64013 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.12 59.218 817090000 317770000 499320000 0 0 0 0 0 0 0 0 0 0 0 0 0 37971 3844 33888 316333;316334 250405;250406 250405 1 NLSLSSSTPPLPSPGR Unmodified 1608.8471 0.84713476 339 O43516 WIPF1 WAS/WASL-interacting protein family member 1 yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 74.145 74.382 2 0.00023009 85338 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.169 62.176 8106400 0 0 0 0 0 0 0 0 0 0 2498700 0 0 1773400 3834300 37972 339 33889 316335;316336;316337 250407 250407 1 NLSNPEMTSGSDK Unmodified 1378.6035 0.60345859 265 O15226 NKRF NF-kappa-B-repressing factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 26.456 26.187 2 0.0010112 32176 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.937 66.129 44501000 0 8981600 0 2552400 1988200 5088700 2710600 2392200 4493800 3458900 4154900 5390200 0 3289500 0 37973 265 33890 316338;316339;316340;316341;316342;316343;316344;316345;316346;316347;316348 250408;250409;250410;250411 250408 4 NLSPGAVESDVR Unmodified 1242.6204 0.62042929 1721 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.082 48.245 2 1.2229E-05 54247 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 107.83 70.282 596840000 0 0 0 25136000 33792000 46419000 38389000 37155000 32817000 63769000 60722000 86626000 59620000 41026000 71366000 37974 1721 33891 316349;316350;316351;316352;316353;316354;316355;316356;316357;316358;316359;316360 250412;250413;250414;250415;250416;250417;250418;250419;250420;250421;250422;250423 250420 11 NLSPGAVESDVRGITGVDLFGTTDAVVK Unmodified 2816.4556 0.45560237 1721 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 0 0 1 By MS/MS By MS/MS 2.4 0.49 3 2 2 3 96.456 91.568 3 1.8931E-31 110302 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 93.446 81.366 474770000 29981000 444790000 0 0 0 0 0 0 0 0 0 0 0 0 0 37975 1721 33892 316361;316362;316363;316364;316365 250424;250425;250426;250427;250428 250427 5 NLSPVVSNELLEQAFSQFGPVEK Unmodified 2531.2908 0.29076888 3589 Q8WXF1 PSPC1 Paraspeckle component 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 3 1 99.487 94.832 3 1.1112E-28 117925 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.168 85.445 77895000 5799700 69152000 2943100 0 0 0 0 0 0 0 0 0 0 0 0 37976 3589 33893 316366;316367;316368;316369;316370 250429;250430;250431;250432;250433;250434 250429 5 NLSRIHPVSTMVK Oxidation (M) 1496.8133 0.81333221 836 P07195 LDHB L-lactate dehydrogenase B chain yes yes 0 1 1 By MS/MS 2 0 1 1 42.949 36.156 3 0.0026535 49677 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.357 65.312 204570000 204570000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37977 836 33894 316371 250435 250435 1021 0 NLSRIHPVSTMVK Unmodified 1480.8184 0.81841759 836 P07195 LDHB L-lactate dehydrogenase B chain yes yes 0 0 1 By MS/MS 2 0 1 1 56.163 48.016 3 0.0032687 65856 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.834 73.834 38234000 38234000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37978 836 33894 316372 250436 250436 0 NLSSASQATR Unmodified 1033.5152 0.51523593 5182 Q9Y446 PKP3 Plakophilin-3 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching 10 0 4 1 1 1 1 10.709 10.876 2 0.011466 9885 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 54.191 45.245 24467000 0 0 0 0 0 0 5335700 5183200 0 0 0 8798800 5149400 0 0 37979 5182 33895 316373;316374;316375;316376 250437;250438 250437 2 NLSSDEATNPISR Unmodified 1402.6688 0.66883604 3091 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 39.417 39.582 2 2.8457E-13 43751 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 138.25 119.98 140470000 0 0 0 9747900 8920000 10903000 10584000 8915100 8854900 16935000 12377000 20400000 0 12492000 20338000 37980 3091 33896 316377;316378;316379;316380;316381;316382;316383;316384;316385;316386;316387 250439;250440;250441;250442;250443;250444;250445;250446;250447;250448 250442 10 NLSSNEAISLEEIR Unmodified 1573.7948 0.79476484 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.003 74.063 2 3.72E-22 84786 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 174.24 141.72 269150000 0 0 0 10677000 13472000 30681000 14169000 13384000 12623000 20206000 34264000 38503000 15983000 25026000 40162000 37981 1986 33897 316388;316389;316390;316391;316392;316393;316394;316395;316396;316397;316398;316399 250449;250450;250451;250452;250453;250454;250455;250456;250457;250458;250459;250460 250452 12 NLSTFAVDGK Unmodified 1050.5346 0.53457439 0 P0DPI2;A0A0B4J2D5 yes no 0 0 0 By MS/MS 2 0 1 1 55.689 49.874 2 0.0049347 64412 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.258 61.364 99277000 0 99277000 0 0 0 0 0 0 0 0 0 0 0 0 0 37982 0 33898 316400 250461 250461 1 NLSVEDAAR Unmodified 973.48287 0.48287317 768 P04040 CAT Catalase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching 10 0 8 1 1 1 1 1 1 1 1 30.782 30.93 2 0.006156 33257 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 75.825 28.831 212340000 0 0 0 48673000 17038000 23425000 18340000 0 0 25718000 0 39010000 25102000 0 15029000 37983 768 33899 316401;316402;316403;316404;316405;316406;316407;316408 250462;250463;250464 250463 3 NLSYQVHR Unmodified 1015.5199 0.51992738 426 O60716 CTNND1 Catenin delta-1 yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 23.646 23.975 2 0.013935 25269 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 71.296 40.006 13493000 0 0 0 0 0 0 0 2561100 0 3908900 0 0 0 0 7023000 37984 426 33900 316409;316410;316411 250465 250465 1 NLTEDNSQNQDLIAK Unmodified 1701.817 0.81695684 4831 Q9UBB4 ATXN10 Ataxin-10 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.51 43.685 2 0 49555 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 261.22 212.78 886180000 0 0 0 45152000 37466000 95775000 52697000 49053000 41362000 95072000 115040000 108490000 68529000 54786000 122760000 37985 4831 33901 316412;316413;316414;316415;316416;316417;316418;316419;316420;316421;316422;316423 250466;250467;250468;250469;250470;250471;250472 250472 6 NLTEQNSYSNIPHEGK Unmodified 1829.8544 0.85440498 4762 Q9NZB2;Q5T035 FAM120A;C9orf129 Constitutive coactivator of PPAR-gamma-like protein 1;Putative uncharacterized protein C9orf129 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.829 40.008 3 2.5894E-06 44005 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 66.335 56.413 154960000 0 0 0 9304000 9525100 11154000 7302900 6206600 9526300 15012000 15522000 22771000 14593000 12855000 21185000 37986 4762 33902 316424;316425;316426;316427;316428;316429;316430;316431;316432;316433;316434;316435 250473;250474;250475;250476;250477;250478;250479;250480;250481 250480 9 NLTFDPVSANR Unmodified 1232.6149 0.61494998 2957 Q6PJ69 TRIM65 Tripartite motif-containing protein 65 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 62.229 62.58 2 0.032407 70737 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.435 23.836 8205800 0 0 0 0 0 0 3286300 0 0 0 0 0 0 0 4919500 37987 2957 33903 316436;316437 250482 250482 0 NLTFQLESLEK Unmodified 1320.6925 0.6925316 2676 Q3V6T2 CCDC88A Girdin yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 86.17 81.396 2 2.1047E-06 101178 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.48 76.684 24157000 0 24157000 0 0 0 0 0 0 0 0 0 0 0 0 0 37988 2676 33904 316438;316439 250483;250484 250483 2 NLTHQIINTDPVINFK Unmodified 1865.9999 0.99994701 3009 Q6ZS30 NBEAL1 Neurobeachin-like protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 85.271 77.141 3 0.027356 100687 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 18.935 11.475 11856000 11856000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37989 3009 33905 316440 250485 250485 1 NLTLQLEQESNK Unmodified 1415.7256 0.72562264 2296 Q13464 ROCK1 Rho-associated protein kinase 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 64.174 58.838 2 0.0011963 72107 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 88.681 67.217 65491000 0 65491000 0 0 0 0 0 0 0 0 0 0 0 0 0 37990 2296 33906 316441;316442 250486;250487 250487 2 NLTNLASNVK Unmodified 1072.5877 0.58767259 3801 Q96DT7 ZBTB10 Zinc finger and BTB domain-containing protein 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 47.63 47.617 2 0.0048432 53496 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 71.349 18.563 40803000 0 0 0 8385200 0 0 0 0 0 0 0 0 19252000 13166000 0 37991 3801 33907 316443;316444;316445;316446 250488;250489;250490;250491 250490 4 NLTNPNTVIILIGNK Unmodified 1622.9356 0.93555583 1834 P61106 RAB14 Ras-related protein Rab-14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 86.036 86.103 2;3 8.6298E-27 99929 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 156.51 133.27 361770000 0 0 0 7994400 17072000 28678000 22091000 30923000 22952000 49203000 41477000 47598000 15284000 26095000 52403000 37992 1834 33908 316447;316448;316449;316450;316451;316452;316453;316454;316455;316456;316457;316458;316459;316460;316461;316462;316463;316464;316465;316466;316467;316468;316469;316470 250492;250493;250494;250495;250496;250497;250498;250499;250500;250501;250502;250503;250504;250505;250506;250507;250508;250509;250510;250511 250501 18 NLTQDEMQR Oxidation (M) 1149.5084 0.508436 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.31 12.458 2 0.0022349 11743 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 105.14 74.951 89084000 0 0 0 4951400 4358300 5506300 6506000 5870000 5233500 9072700 8172400 12697000 9229500 7429800 10057000 37993 2378 33909 316471;316472;316473;316474;316475;316476;316477;316478;316479;316480;316481;316482 250512;250513;250514;250515;250516;250517;250518;250519;250520;250521;250522 250513 3867 9 NLTQDEMQR Unmodified 1133.5135 0.51352137 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.409 23.613 2 0.0031541 25221 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 92.439 56.559 133660000 0 0 0 6632900 5814500 8052200 6783500 7199900 4691900 16148000 12601000 17751000 13316000 14936000 19730000 37994 2378 33909 316483;316484;316485;316486;316487;316488;316489;316490;316491;316492;316493;316494 250523;250524;250525;250526;250527;250528;250529;250530;250531;250532;250533;250534 250534 12 NLTSNMWR Unmodified 1020.4811 0.48109903 2828 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 51.609 52.146 2 0.016501 57969 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.169 38.02 14942000 0 0 0 0 0 0 0 0 0 0 0 2892200 0 3555900 8493700 37995 2828 33910 316495;316496;316497 250535 250535 1 NLTVDEGTMK Oxidation (M) 1122.5227 0.52268908 2635 Q16775 HAGH Hydroxyacylglutathione hydrolase, mitochondrial yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 23.269 23.451 2 0.010965 23989 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 49.418 26.926 20206000 0 0 0 2711100 0 1750200 2001400 0 2107200 2956900 3794300 4884400 0 0 0 37996 2635 33911 316498;316499;316500;316501;316502;316503;316504 250536;250537;250538 250536 4290 2 NLTVDEGTMK Unmodified 1106.5278 0.52777445 2635 Q16775 HAGH Hydroxyacylglutathione hydrolase, mitochondrial yes yes 0 0 0 By MS/MS 10 0 1 1 35.843 36.587 2 0.0048714 39878 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 103.19 67.837 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37997 2635 33911 316505 250539 250539 1 NLTVILSDASAPGEGEHK Unmodified 1836.9218 0.92175626 4323 Q9H0D6 XRN2 5'-3' exoribonuclease 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.29 2.21 1 1 19 1 1 1 1 1 2 1 1 2 2 2 2 2 2 69.832 69.628 2;3 1.654E-08 79151 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.731 66.439 207330000 0 10973000 9861100 3429700 5544000 10314000 9687500 7465300 12130000 17520000 20547000 31115000 12179000 17638000 38926000 37998 4323 33912 316506;316507;316508;316509;316510;316511;316512;316513;316514;316515;316516;316517;316518;316519;316520;316521;316522;316523;316524;316525;316526 250540;250541;250542;250543;250544;250545;250546;250547;250548;250549;250550;250551;250552;250553;250554;250555 250543 10 NLTYSAPLYVDITK Unmodified 1596.8399 0.83992412 1291 P30876 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 82.693 82.823 2 0.00038724 95046 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 89.403 69.1 35450000 0 0 0 0 0 2346300 0 2341700 0 3918800 4048600 3896500 2760300 5709300 10428000 37999 1291 33913 316527;316528;316529;316530;316531;316532;316533;316534;316535 250556;250557;250558;250559;250560;250561;250562;250563 250562 8 NLVAELR Unmodified 813.47085 0.47085192 4802 Q9P206 KIAA1522 Uncharacterized protein KIAA1522 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 49.849 50.014 2 0.027176 57186 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 77.741 12.069 158190000 0 0 0 10124000 12903000 0 11657000 17051000 0 15960000 18322000 21429000 18852000 12928000 18959000 38000 4802 33914 316536;316537;316538;316539;316540;316541;316542;316543;316544;316545 250564;250565;250566 250566 3 NLVAFVSQEAGNR Unmodified 1403.7157 0.71572665 4136 Q9BT73 PSMG3 Proteasome assembly chaperone 3 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 75.921 76.093 2 5.779E-12 87311 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 123.51 100.77 17325000 0 0 0 0 0 2715100 0 0 0 0 3698900 0 0 0 10911000 38001 4136 33915 316546;316547;316548 250567;250568 250568 2 NLVDNITGQR Unmodified 1128.5887 0.58873523 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 53.837 53.945 2 0.0015597 62326 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 93.267 56.246 162710000 0 0 0 10660000 14388000 14765000 17841000 16401000 0 21456000 0 24163000 18197000 10458000 14384000 38002 2501 33916 316549;316550;316551;316552;316553;316554;316555;316556;316557;316558 250569;250570;250571 250570 2 NLVDSYVAIINK Unmodified 1347.7398 0.73981614 1630 P50570 DNM2 Dynamin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 84.185 84.25 2 0.00014406 97794 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 101.11 82.793 349470000 0 0 0 7245700 19371000 34800000 22574000 31109000 20367000 46415000 30367000 36519000 14075000 25152000 61479000 38003 1630 33917 316559;316560;316561;316562;316563;316564;316565;316566;316567;316568;316569;316570 250572;250573;250574;250575;250576;250577 250576 4 NLVELAELELK Unmodified 1269.718 0.71801807 5032 Q9UNH7 SNX6 Sorting nexin-6;Sorting nexin-6, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 4 3.46 3 1 1 1 1 1 94.242 90.415 2 3.603E-05 113661 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.78 64.668 269130000 60427000 197780000 9487900 0 0 0 0 0 0 0 0 0 0 0 1431000 38004 5032 33918 316571;316572;316573;316574 250578;250579;250580;250581 250578 4 NLVESELQR Unmodified 1086.5669 0.56693715 2921 Q6P1N0 CC2D1A Coiled-coil and C2 domain-containing protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 47.545 47.795 2 0.006387 53749 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 75.213 51.183 106990000 0 0 0 0 5679400 10101000 0 6609100 8223900 12402000 11269000 17581000 9116600 8556800 17447000 38005 2921 33919 316575;316576;316577;316578;316579;316580;316581;316582;316583;316584;316585 250582;250583;250584;250585;250586;250587;250588 250583 7 NLVFSDGYVVK Unmodified 1239.6499 0.6499385 2531 Q15418 RPS6KA1 Ribosomal protein S6 kinase alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 75.465 74.326 2 0.00042561 86100 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 85.731 71.524 469520000 15884000 278260000 11733000 8142000 8177700 13808000 12160000 13709000 10050000 17028000 15405000 16925000 9897600 13727000 24618000 38006 2531 33920 316586;316587;316588;316589;316590;316591;316592;316593;316594;316595;316596;316597;316598;316599;316600;316601 250589;250590;250591;250592;250593;250594;250595;250596;250597;250598;250599;250600;250601;250602;250603;250604;250605;250606 250603 18 NLVGALDEGDGESAAGSGGGR Unmodified 1887.8559 0.85586154 2706 Q53LP3 SOWAHC Ankyrin repeat domain-containing protein SOWAHC yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.043 56.169 2 2.009E-15 62774 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 112.72 102.67 97753000 0 0 0 6002000 7378800 8262300 9241100 6505100 6094500 9086600 8787700 10729000 8046100 6971900 10648000 38007 2706 33921 316602;316603;316604;316605;316606;316607;316608;316609;316610;316611;316612;316613 250607;250608;250609;250610;250611;250612;250613;250614;250615;250616 250613 10 NLVGSEVK Unmodified 844.46543 0.46543219 5193 Q9Y4C1 KDM3A Lysine-specific demethylase 3A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 25.051 25.354 2 0.011827 27483 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 76.035 39.478 131650000 0 0 0 0 44737000 0 0 37660000 0 0 0 14060000 17672000 0 17524000 38008 5193 33922 316614;316615;316616;316617;316618 250617;250618;250619 250619 3 NLVHSGATK Unmodified 925.49813 0.49812931 2348 Q13867 BLMH Bleomycin hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 6.4713 6.5778 2 0.0051431 4285 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 82.279 42.176 28187000 0 0 0 16164000 0 3262200 0 5864100 0 0 0 0 1215500 0 1681200 38009 2348 33923 316619;316620;316621;316622;316623 250620;250621;250622 250622 3 NLVLAGIK Unmodified 826.52764 0.52763852 3 A0AVT1 UBA6 Ubiquitin-like modifier-activating enzyme 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62.949 62.028 2 0.03048 69278 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.504 18.476 406790000 253670000 89023000 0 3092200 2949600 7022300 3731000 2697400 2096900 7304900 6878500 6229200 4864600 4789200 12441000 38010 3 33924 316624;316625;316626;316627;316628;316629;316630;316631;316632;316633;316634;316635;316636;316637 250623;250624;250625 250624 3 NLVMNTGPYYFVK Oxidation (M) 1560.7647 0.76465068 545 O75818 RPP40 Ribonuclease P protein subunit p40 yes yes 0 1 0 By MS/MS 2 0 1 1 82.477 74.346 2 0.0086725 97381 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 59.426 46.83 13984000 13984000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38011 545 33925 316638 250626 250626 703 1 NLVNAQQVAGSAQQQGDQSIR Unmodified 2211.0992 0.099220133 2792 Q5TAX3 ZCCHC11 Terminal uridylyltransferase 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 56.373 56.44 3 1.2104E-47 63504 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 115.63 96.849 83225000 0 0 0 4647000 5629200 7479000 6269300 5453600 12443000 8491000 10195000 0 0 9524300 13094000 38012 2792 33926 316639;316640;316641;316642;316643;316644;316645;316646;316647;316648 250627;250628;250629;250630;250631;250632;250633;250634;250635;250636;250637 250631 11 NLVNDDDAIVAASK Unmodified 1443.7205 0.72053726 2112 Q05086 UBE3A Ubiquitin-protein ligase E3A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 57.696 58.063 2 1.604E-05 66106 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 88.596 67.132 18708000 0 0 0 0 0 0 3643400 0 0 0 6646200 0 0 0 8418200 38013 2112 33927 316649;316650;316651 250638;250639;250640;250641 250641 4 NLVPEEADEHLFALEK Unmodified 1852.9207 0.92069363 3553 Q8WUX2 CHAC2 Putative glutathione-specific gamma-glutamylcyclotransferase 2 yes yes 0 0 0 By MS/MS 10 0 1 1 80.029 80.258 3 0.00019794 92382 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.64 39.634 7131500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7131500 38014 3553 33928 316652 250642 250642 1 NLVPLLLAPENLVEK Unmodified 1660.9764 0.97635802 3456 Q8NHH9 ATL2 Atlastin-2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 96.075 96.219 2 0.002797 111641 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.094 41.675 5530300 0 0 0 0 0 0 0 0 0 1920900 877220 0 0 455780 2276300 38015 3456 33929 316653;316654;316655;316656 250643 250643 1 NLVSPAYCTQESREEIPGGEAR Unmodified 2462.1496 0.14960072 4652 Q9NUQ3 TXLNG Gamma-taxilin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 58.967 59.019 3 7.4899E-10 66550 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.784 62.121 44438000 0 0 0 3405900 3840100 0 2839800 3729400 0 5855200 7195400 0 0 6913300 10659000 38016 4652 33930 316657;316658;316659;316660;316661;316662;316663;316664 250644;250645;250646;250647;250648;250649;250650;250651;250652 250647 9 NLVTEDVMR Unmodified 1075.5332 0.53319418 829 P06744 GPI Glucose-6-phosphate isomerase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 52.891 53.385 2 0.0034358 59874 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 106.04 70.162 674290000 0 0 0 0 0 0 0 0 0 0 142980000 75071000 0 73671000 382570000 38017 829 33931 316665;316666;316667;316668;316669;316670 250653;250654;250655;250656;250657;250658;250659 250659 7 NLVTEDVMR Oxidation (M) 1091.5281 0.5281088 829 P06744 GPI Glucose-6-phosphate isomerase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6 4 3 3 1 1 1 1 1 1 39.248 37 2 0.010952 40165 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.378 25.817 787340000 28278000 395170000 58739000 0 0 0 0 0 0 0 96014000 52635000 0 0 156510000 38018 829 33931 316671;316672;316673;316674;316675;316676 250660;250661;250662;250663;250664;250665 250663 1006 5 NLVTEDVMRMLVDLAK Oxidation (M) 1861.9642 0.96415513 829 P06744 GPI Glucose-6-phosphate isomerase yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2 0.756 2 3 2 2 4 1 102.47 101.32 3 0.0019109 113762 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 57.328 47.957 80319000 29295000 50418000 606240 0 0 0 0 0 0 0 0 0 0 0 0 38019 829 33932 316677;316678;316679;316680;316681;316682;316683 250666;250667;250668;250669;250670;250671 250668 1005;1006 5 NLVTEDVMRMLVDLAK Unmodified 1845.9692 0.9692405 829 P06744 GPI Glucose-6-phosphate isomerase yes yes 0 0 1 By MS/MS 1.5 0.5 1 1 2 106.8 105.37 3 0.00025031 96565 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 72.175 49.7 66341000 66341000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38020 829 33932 316684;316685 250672;250673 250672 2 NLVTFTPSK Unmodified 1005.5495 0.54949617 4433 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.2 3.92 3 2 1 1 1 1 1 56.836 53.428 2 0.0056661 72598 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 131.06 71.857 188640000 50133000 100560000 2533100 0 0 0 0 0 0 0 0 20630000 0 14776000 0 38021 4433 33933 316686;316687;316688;316689;316690 250674;250675;250676 250675 2 NLVTGDHIPTPQDLPQRK Unmodified 2028.0752 0.075237214 365 O43768 ENSA Alpha-endosulfine yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.42 3.88 6 1 5 3 2 2 1 1 1 2 67.636 64.453 3;4 0.00010972 85702 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.768 58.047 754680000 516660000 50543000 9551000 0 0 0 0 0 0 0 17502000 23689000 0 28228000 108510000 38022 365 33934 316691;316692;316693;316694;316695;316696;316697;316698;316699;316700;316701;316702 250677;250678;250679;250680;250681;250682;250683;250684;250685;250686;250687;250688;250689;250690 250685 11 NLVWTSGISALDGEFQSASEVDFYIDK Unmodified 2990.4185 0.41854817 5084 Q9Y262 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 0 0 0 By MS/MS 2 0 1 1 99.839 91.708 3 0.031581 118203 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 18.415 12.188 21545000 21545000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38023 5084 33935 316703 250691 250691 1 NLVYDQSPNR Unmodified 1204.5836 0.58364985 4729 Q9NXR1 NDE1 Nuclear distribution protein nudE homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 32.703 32.941 2 0.0013365 35856 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 107.47 76.895 85927000 0 0 0 0 4767300 6488400 7972200 7023100 5397700 5415500 10025000 9879100 9807500 5984800 13167000 38024 4729 33936 316704;316705;316706;316707;316708;316709;316710;316711;316712;316713;316714 250692;250693;250694;250695;250696;250697;250698;250699;250700;250701;250702 250696 11 NLWVSGLSSTTR Unmodified 1319.6834 0.68336389 2377 Q14151 SAFB2 Scaffold attachment factor B2 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 72.45 72.573 2 0.0066448 82891 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.092 26.937 23838000 0 0 0 0 2330900 0 2989900 0 0 0 0 5851000 0 4362800 8303500 38025 2377 33937 316715;316716;316717;316718;316719;316720 250703;250704;250705;250706 250703 4 NLYAANGIGAVLAHK Unmodified 1510.8256 0.82561145 2945 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.56 1.83 1 17 1 1 1 1 1 1 1 1 2 2 2 2 2 75.01 74.66 2;3 5.6575E-31 96698 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.592 91.06 294880000 31639000 0 0 4821000 6560600 13238000 12623000 17431000 14123000 18393000 23027000 37273000 27298000 23599000 64853000 38026 2945 33938 316721;316722;316723;316724;316725;316726;316727;316728;316729;316730;316731;316732;316733;316734;316735;316736;316737;316738 250707;250708;250709;250710;250711;250712;250713;250714;250715;250716;250717;250718;250719;250720;250721;250722 250712 16 NLYIISVK Unmodified 948.56442 0.56441796 1913 P62829 RPL23 60S ribosomal protein L23 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 4 2 12 2 2 2 1 1 1 1 1 1 1 1 1 1 1 1 73.394 72 2 0.020746 83290 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 62.546 39.237 1962900000 282980000 54482000 84030000 85806000 81620000 113010000 134160000 98502000 109680000 167630000 120560000 217210000 101080000 102110000 209990000 38027 1913 33939 316739;316740;316741;316742;316743;316744;316745;316746;316747;316748;316749;316750;316751;316752;316753;316754;316755;316756 250723;250724;250725;250726;250727;250728;250729;250730;250731;250732;250733;250734 250734 12 NLYNEALK Unmodified 963.50255 0.50254598 624 O95163 IKBKAP Elongator complex protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 43.125 43.303 2 0.028474 47266 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 56.721 30.782 208240000 0 0 0 8841600 8813200 17388000 14408000 12721000 0 20154000 25858000 36781000 20294000 18948000 24028000 38028 624 33940 316757;316758;316759;316760;316761;316762;316763;316764;316765;316766;316767 250735;250736 250736 2 NLYPSSSPYTR Unmodified 1283.6146 0.61461563 5131 Q9Y2Z0 SUGT1 Suppressor of G2 allele of SKP1 homolog yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46.817 45.981 2 3.7563E-05 51947 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 126.07 79.642 916250000 27368000 34920000 0 45731000 30210000 67875000 48839000 89300000 30889000 92621000 80310000 94626000 72400000 72378000 128790000 38029 5131 33941 316768;316769;316770;316771;316772;316773;316774;316775;316776;316777;316778;316779;316780;316781 250737;250738;250739;250740;250741;250742;250743;250744;250745;250746;250747 250737 6 NLYPSSSPYTRNWDK Unmodified 1826.8588 0.85876208 5131 Q9Y2Z0 SUGT1 Suppressor of G2 allele of SKP1 homolog yes yes 0 0 1 By MS/MS 2 0 1 1 67.809 59.515 3 6.8919E-11 79659 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 112.17 107.62 108860000 108860000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38030 5131 33942 316782 250748 250748 1 NLYPSYK Unmodified 883.44397 0.44396847 5118 Q9Y2T3 GDA Guanine deaminase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 39.166 37.636 2 0.029967 48080 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.006 35.839 1155800000 145930000 940360000 0 7672600 0 0 0 4186100 0 0 11424000 0 0 12499000 33699000 38031 5118 33943 316783;316784;316785;316786;316787;316788;316789 250749;250750;250751 250749 3 NLYSDDIPHALR Unmodified 1412.7048 0.70482762 1809 P60228 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.779 63.87 3 0.0034111 72168 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.516 36.429 152430000 0 0 0 6323400 5498600 15870000 6837500 9190600 6573200 15720000 16600000 15379000 11472000 14322000 28643000 38032 1809 33944 316790;316791;316792;316793;316794;316795;316796;316797;316798;316799;316800;316801 250752;250753;250754;250755;250756;250757;250758 250754 2 NLYSDDIPHALREK Unmodified 1669.8424 0.84238373 1809 P60228 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.08 3.93 5 1 6 2 2 2 1 1 1 1 1 1 61.691 58.942 3;4 0.00056034 80086 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.102 70.41 306110000 162780000 48642000 4591500 0 0 12135000 0 0 7273800 0 0 21807000 7894600 8919500 32066000 38033 1809 33945 316802;316803;316804;316805;316806;316807;316808;316809;316810;316811;316812;316813 250759;250760;250761;250762;250763;250764;250765 250763 7 NLYSLDLSDLPLDK Unmodified 1604.8298 0.82975336 2880 Q6GYQ0 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 yes yes 0 0 0 By MS/MS 10 0 1 1 90.988 91.126 2 0.00047763 105514 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.349 44.557 1783100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1783100 38034 2880 33946 316814 250766 250766 1 NLYVTFPIPDLQK Unmodified 1546.8395 0.83953018 1006 P14735 IDE Insulin-degrading enzyme yes yes 0 0 0 By MS/MS 10 0 1 1 91.99 92.128 2 0.017648 106705 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.35 34.378 2141400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2141400 38035 1006 33947 316815 250767 250767 1 NMADAMR Oxidation (M) 823.33166 0.3316576 1714 P53396 ACLY ATP-citrate synthase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.6395 6.7637 2 0.020597 4570 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 73.975 57.048 923300000 0 0 0 15979000 56243000 51920000 202670000 186500000 192700000 52104000 62476000 91570000 2741200 4369900 4019100 38036 1714 33948 316816;316817;316818;316819;316820;316821;316822;316823;316824;316825;316826;316827 250768;250769;250770;250771;250772 250770 2781;2782 5 NMADAMR Unmodified 807.33674 0.33674298 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 19.073 19.249 2 0.030357 19496 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 130.05 93.464 946370000 0 0 0 33268000 71241000 79710000 200430000 0 229580000 72665000 105860000 131930000 0 0 21683000 38037 1714 33948 316828;316829;316830;316831;316832;316833;316834;316835;316836 250773;250774;250775;250776 250774 0 NMADAMRK Unmodified 935.43171 0.431706 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14.468 13.922 2 0.010002 13145 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 125.25 111.74 1160100000 705770000 123410000 41937000 7685900 18869000 11228000 59431000 61403000 58522000 16033000 22585000 27431000 752630 1155700 3839500 38038 1714 33949 316837;316838;316839;316840;316841;316842;316843;316844;316845;316846;316847;316848;316849;316850;316851 250777;250778;250779;250780;250781;250782;250783;250784 250784 2 NMADAMRK Oxidation (M) 951.42662 0.42662062 1714 P53396 ACLY ATP-citrate synthase yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2 0 6 2 2 2 5.4857 2.5444 2 0.022927 1775 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 94.662 65.286 803700000 567860000 197600000 38235000 0 0 0 0 0 0 0 0 0 0 0 0 38039 1714 33949 316852;316853;316854;316855;316856;316857 250785;250786;250787 250786 2781;2782 1 NMADAMRK 2 Oxidation (M) 967.42154 0.42153524 1714 P53396 ACLY ATP-citrate synthase yes yes 0 2 1 By MS/MS 2 0 1 1 18.04 13.66 2 0.019434 19979 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.855 37.207 33964000 33964000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38040 1714 33949 316858 250788 250788 2781;2782 0 NMAEQIIQEIYSQIQSK Oxidation (M) 2038.0041 0.004105685 1249 P29401 TKT Transketolase yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 99.563 95.531 3 7.6193E-05 117973 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.548 70.231 25650000 0 25650000 0 0 0 0 0 0 0 0 0 0 0 0 0 38041 1249 33950 316859;316860 250789;250790 250789 1844 2 NMAEQIIQEIYSQIQSK Unmodified 2022.0092 0.0091910629 1249 P29401 TKT Transketolase yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 102.91 98.967 3 0.00011222 122247 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 49.425 42.99 43275000 0 42117000 1158000 0 0 0 0 0 0 0 0 0 0 0 0 38042 1249 33950 316861;316862;316863 250791;250792;250793 250792 3 NMAILDPPDADHLYSAK Unmodified 1869.8931 0.89309867 3255 Q8IX12 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 77.423 76.19 3 0.0002174 94589 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.235 60.82 411420000 17796000 168710000 6562800 0 0 13990000 9762400 22457000 15172000 18776000 20665000 27407000 13213000 20069000 56838000 38043 3255 33951 316864;316865;316866;316867;316868;316869;316870;316871;316872;316873;316874;316875;316876;316877 250794;250795;250796;250797;250798;250799;250800;250801;250802;250803 250796 10 NMAILDPPDADHLYSAK Oxidation (M) 1885.888 0.88801329 3255 Q8IX12 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 2 1 1 1 68.139 67.659 2;3 2.2465E-08 76941 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 80.609 75.181 343150000 15470000 0 0 39833000 0 41819000 3423900 3853600 43688000 5611500 6249800 80351000 51738000 44179000 6937900 38044 3255 33951 316878;316879;316880;316881;316882;316883;316884;316885;316886;316887;316888;316889;316890 250804;250805;250806;250807;250808;250809;250810;250811;250812;250813 250809 4867 7 NMAINPSK Unmodified 873.43784 0.43783723 60 CON__P02663 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 22.139 21.988 2 0.00685 22991 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 93.992 79.579 + 18494000 0 0 0 0 6441400 12053000 0 0 0 0 0 0 0 0 0 38045 60 33952 316891;316892 250814 250814 1 NMALSIAER Unmodified 1003.5121 0.51206481 3311 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 53.062 53.243 2 0.0031256 60164 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 91.069 56.966 174000000 0 0 0 0 11264000 0 0 19408000 23097000 25980000 22428000 0 0 17450000 54372000 38046 3311 33953 316893;316894;316895;316896;316897;316898;316899;316900 250815;250816;250817;250818;250819;250820;250821;250822;250823;250824;250825 250815 11 NMALSIAER Oxidation (M) 1019.507 0.50697943 3311 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 yes yes 0 1 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching 10 0 9 1 1 1 2 1 2 1 37.575 37.785 2 0.033644 42311 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 41.876 23.651 47463000 0 0 0 6049900 0 0 0 6321100 4313900 5859600 10129000 0 0 8012200 6776500 38047 3311 33953 316901;316902;316903;316904;316905;316906;316907;316908;316909 250826;250827;250828 250828 3 NMAPGAVCSPGESK Unmodified 1403.6173 0.61733452 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.004 31.193 2 9.2178E-12 33916 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 110.66 104.88 137110000 0 0 0 8360900 7917600 11623000 10174000 10413000 6260500 9352500 15774000 17355000 9381800 11850000 18653000 38048 4285 33954 316910;316911;316912;316913;316914;316915;316916;316917;316918;316919;316920;316921 250829;250830;250831;250832;250833;250834;250835;250836;250837;250838;250839;250840;250841;250842 250831 14 NMAPGAVCSPGESK Oxidation (M) 1419.6122 0.61224914 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 2 1 1 1 2 1 1 1 20.721 20.926 2 2.7299E-06 21190 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 93.345 83.037 110810000 0 0 0 8574100 6627000 10197000 8121400 6326800 6053900 10333000 10025000 14153000 9350300 10428000 10621000 38049 4285 33954 316922;316923;316924;316925;316926;316927;316928;316929;316930;316931;316932;316933;316934;316935 250843;250844;250845;250846;250847 250845 5748 5 NMAQFSVLLPR Unmodified 1274.6805 0.68052712 2237 Q13126 MTAP S-methyl-5'-thioadenosine phosphorylase yes yes 0 0 0 By MS/MS 10 0 1 1 85.217 85.385 2 0.0051105 98583 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.1 68.821 8007400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8007400 38050 2237 33955 316936 250848 250848 1 NMAQFSVLLPR Oxidation (M) 1290.6754 0.67544174 2237 Q13126 MTAP S-methyl-5'-thioadenosine phosphorylase yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 78.727 78.936 2 0.010703 91344 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 61.56 46.409 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38051 2237 33955 316937;316938 250849;250850 250850 3636 2 NMAQFSVLLPRH Oxidation (M) 1427.7344 0.73435361 2237 Q13126 MTAP S-methyl-5'-thioadenosine phosphorylase yes yes 0 1 1 By MS/MS 2 0 1 1 78.959 70.828 3 0.015704 93055 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 41.684 34.79 20520000 20520000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38052 2237 33956 316939 250851 250851 3636 0 NMDAIIVDSEK Unmodified 1233.5911 0.59110299 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 6.71 3.81 2 1 4 2 1 1 1 1 1 60.636 58.569 2 1.5226E-06 74810 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.57 99.499 180670000 0 146600000 2361900 5079800 0 0 8717500 0 0 1112100 16793000 0 0 0 0 38053 2431 33957 316940;316941;316942;316943;316944;316945;316946 250852;250853;250854;250855;250856 250853 4 NMDAIIVDSEK Oxidation (M) 1249.586 0.58601761 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 43.503 38.276 2 0.00056353 48505 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 97.456 81.254 119230000 24102000 92612000 2513200 0 0 0 0 0 0 0 0 0 0 0 0 38054 2431 33957 316947;316948;316949;316950 250857;250858;250859;250860 250860 3998 4 NMDPLNDNIATLLHQSSDK Oxidation (M) 2141.0059 0.005896599 1356 P35579 MYH9 Myosin-9 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.97 3.45 7 1 23 2 4 2 1 2 2 2 2 2 2 2 2 2 2 2 82.122 81.43 2;3 6.0112E-72 99339 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 153.95 151.55 5071400000 71115000 974930000 68797000 51392000 186360000 362020000 160200000 297320000 269930000 593570000 432500000 522050000 219370000 237340000 624550000 38055 1356 33958 316951;316952;316953;316954;316955;316956;316957;316958;316959;316960;316961;316962;316963;316964;316965;316966;316967;316968;316969;316970;316971;316972;316973;316974;316975;316976;316977;316978;316979;316980;316981 250861;250862;250863;250864;250865;250866;250867;250868;250869;250870;250871;250872;250873;250874;250875;250876;250877;250878;250879;250880;250881;250882;250883;250884;250885 250877 2087 25 NMDPLNDNIATLLHQSSDK Unmodified 2125.011 0.010981977 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 86.156 84.893 3 2.9297E-47 98028 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 130 121.4 1326000000 33857000 1126600000 11846000 0 4872100 11846000 0 13366000 8132500 13151000 10097000 11979000 3148800 7075000 70028000 38056 1356 33958 316982;316983;316984;316985;316986;316987;316988;316989;316990;316991;316992;316993;316994;316995 250886;250887;250888;250889;250890;250891;250892;250893;250894;250895;250896;250897;250898;250899;250900;250901;250902;250903;250904 250891 19 NMDSMPELQK 2 Oxidation (M) 1223.5162 0.51622349 3683 Q92900 UPF1 Regulator of nonsense transcripts 1 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 18.697 18.862 2 0.0090571 19356 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 43.808 24.537 35529000 0 0 0 3624200 0 3858800 3526900 2524700 4373300 5096600 0 4814800 4493700 3216400 0 38057 3683 33959 316996;316997;316998;316999;317000;317001;317002;317003;317004 250905;250906;250907 250905 5235;5236 3 NMDSMPELQK Oxidation (M) 1207.5213 0.52130887 3683 Q92900 UPF1 Regulator of nonsense transcripts 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 37.015 37.206 2 0.010625 41390 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 49.715 36.207 26583000 0 0 0 2559500 0 2434000 0 2459200 2039200 2287400 5664400 5047400 4091500 0 0 38058 3683 33959 317005;317006;317007;317008;317009;317010;317011;317012 250908;250909 250908 5235;5236 2 NMDSMPELQK Unmodified 1191.5264 0.52639425 3683 Q92900 UPF1 Regulator of nonsense transcripts 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 48.221 48.522 2 0.0097333 54590 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 57.249 51.096 51489000 0 0 0 0 0 4594100 0 4779700 0 6267300 6377500 0 4332800 6775800 18361000 38059 3683 33959 317013;317014;317015;317016;317017;317018;317019 250910;250911 250910 2 NMEPEQPSTSK Unmodified 1246.55 0.54996646 4574 Q9NQS1 AVEN Cell death regulator Aven yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 17.91 18.098 2 2.9598E-05 18490 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 118.5 84.698 89508000 0 0 0 7694900 7105100 8138200 6501200 8697100 6843300 9357600 8445500 9452500 5595400 4718900 6958100 38060 4574 33960 317020;317021;317022;317023;317024;317025;317026;317027;317028;317029;317030;317031 250912;250913;250914;250915;250916;250917;250918;250919;250920;250921;250922;250923 250922 12 NMEPEQPSTSK Oxidation (M) 1262.5449 0.54488108 4574 Q9NQS1 AVEN Cell death regulator Aven yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 9.8365 9.9477 2 0.00023832 8556 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 87.913 57.343 46548000 0 0 0 5129500 3315000 4825500 5853600 2518900 3976400 4681600 5278500 5371600 3448800 2148500 0 38061 4574 33960 317032;317033;317034;317035;317036;317037;317038;317039;317040;317041;317042 250924;250925;250926;250927 250927 5979 4 NMEVLYDSLQLAHK Oxidation (M) 1675.824 0.82395647 2142 Q07864 POLE DNA polymerase epsilon catalytic subunit A yes yes 0 1 0 By MS/MS 2 0 1 1 78.783 70.652 3 0.00108 92844 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.287 55.406 15203000 15203000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38062 2142 33961 317043 250928 250928 3447 1 NMFLVGEGDSVITQVLNK Oxidation (M) 1979.0034 0.0033774035 505 O75475 PSIP1 PC4 and SFRS1-interacting protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 95.241 90.093 3 0.00011871 113507 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.691 57.966 40448000 15970000 23604000 874280 0 0 0 0 0 0 0 0 0 0 0 0 38063 505 33962 317044;317045;317046 250929;250930;250931 250931 654 3 NMFLVGEGDSVITQVLNK Unmodified 1963.0085 0.0084627814 505 O75475 PSIP1 PC4 and SFRS1-interacting protein yes yes 0 0 0 By MS/MS 2 0 1 1 98.81 94.076 3 3.2034E-05 116360 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 56.215 50.574 15568000 0 15568000 0 0 0 0 0 0 0 0 0 0 0 0 0 38064 505 33962 317047 250932;250933 250932 2 NMGGPYGGGNYGPGGSGGSGGYGGR Unmodified 2188.8981 0.89807748 1141 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 47.507 47.67 2;3 8.9836E-76 53769 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 151.48 146.21 559730000 0 0 0 14329000 17364000 20500000 23075000 26741000 16341000 42576000 74312000 76961000 34349000 48467000 164710000 38065 1141 33963 317048;317049;317050;317051;317052;317053;317054;317055;317056;317057;317058;317059;317060;317061;317062;317063;317064;317065;317066;317067;317068;317069;317070;317071 250934;250935;250936;250937;250938;250939;250940;250941;250942;250943;250944;250945;250946;250947 250942 14 NMGGPYGGGNYGPGGSGGSGGYGGR Oxidation (M) 2204.893 0.89299211 1141 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes yes 0 1 0 By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 1 1 2 1 1 2 2 1 2 2 39.79 40.106 2;3 1.5627E-96 44661 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 149.73 147.97 351300000 0 0 0 0 4976000 6550800 8138600 22131000 8055900 16041000 70541000 77904000 19178000 47773000 70009000 38066 1141 33963 317072;317073;317074;317075;317076;317077;317078;317079;317080;317081;317082;317083;317084;317085;317086;317087 250948;250949;250950;250951;250952;250953;250954;250955 250954 1641 8 NMGYVQQR Unmodified 994.46545 0.46544897 355 O43684 BUB3 Mitotic checkpoint protein BUB3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.61 20.813 2 0.0048933 21544 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 114.19 100.2 606050000 0 0 0 24949000 21189000 21510000 35328000 40508000 22791000 57456000 89327000 71099000 45084000 51069000 125740000 38067 355 33964 317088;317089;317090;317091;317092;317093;317094;317095;317096;317097;317098;317099 250956;250957;250958;250959;250960;250961;250962;250963;250964;250965;250966;250967;250968 250966 11 NMGYVQQR Oxidation (M) 1010.4604 0.46036359 355 O43684 BUB3 Mitotic checkpoint protein BUB3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 2 1 2 1 2 2 2 2 1 2 10.382 10.522 2 0.0028853 8307 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 110.9 88.771 278740000 0 0 0 17092000 11602000 15737000 15137000 10892000 8858500 26385000 36634000 38959000 27543000 11766000 58133000 38068 355 33964 317100;317101;317102;317103;317104;317105;317106;317107;317108;317109;317110;317111;317112;317113;317114;317115;317116;317117;317118;317119;317120 250969;250970;250971;250972;250973;250974;250975;250976;250977;250978;250979;250980;250981;250982;250983;250984;250985;250986;250987;250988 250981 445 12 NMIIDRENQCVIISGESGAGK Oxidation (M) 2306.0995 0.099479408 2215 Q12965 MYO1E Unconventional myosin-Ie yes yes 0 1 1 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 55.174 55.663 3 4.4758E-05 63081 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 49.973 41.181 16433000 0 0 0 0 0 0 0 0 0 0 0 6748300 2372000 0 7312300 38069 2215 33965 317121;317122;317123;317124 250989;250990;250991 250990 3605 3 NMINTFVPSGK Unmodified 1206.6067 0.60669348 2307 Q13510 ASAH1 Acid ceramidase;Acid ceramidase subunit alpha;Acid ceramidase subunit beta yes yes 0 0 0 By MS/MS 10 0 1 1 68.765 68.1 2 0.010949 78802 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 63.734 49.731 11399000 0 0 0 11399000 0 0 0 0 0 0 0 0 0 0 0 38070 2307 33966 317125 250992 250992 1 NMITGTSQADCAVLIVAAGVGEFEAGISK Oxidation (M) 2924.426 0.4259585 1960 P68104;Q5VTE0;Q05639 EEF1A1;EEF1A1P5;EEF1A2 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 2 yes no 0 1 0 By MS/MS By MS/MS By MS/MS 2.43 0.496 13 10 7 12 4 100.64 96.562 2;3 1.5712E-154 120347 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 168.17 165.34 12454000000 10210000000 2231400000 12332000 0 0 0 0 0 0 0 0 0 0 0 0 38071 1960 33967 317126;317127;317128;317129;317130;317131;317132;317133;317134;317135;317136;317137;317138;317139;317140;317141;317142;317143;317144;317145;317146;317147;317148 250993;250994;250995;250996;250997;250998;250999;251000;251001;251002;251003;251004;251005;251006;251007;251008;251009;251010;251011;251012;251013;251014;251015;251016;251017;251018;251019;251020;251021;251022 251018 3148 30 NMITGTSQADCAVLIVAAGVGEFEAGISK Unmodified 2908.431 0.43104388 1960 P68104;Q5VTE0;Q05639 EEF1A1;EEF1A1P5;EEF1A2 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.661 4 16 12 23 7 2 103.58 100.07 2;3;4 7.0334E-168 101960 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 184.66 182.17 11661000000 10507000000 1007100000 146810000 0 0 0 0 0 0 0 0 0 0 0 0 38072 1960 33967 317149;317150;317151;317152;317153;317154;317155;317156;317157;317158;317159;317160;317161;317162;317163;317164;317165;317166;317167;317168;317169;317170;317171;317172;317173;317174;317175;317176;317177;317178;317179;317180 251023;251024;251025;251026;251027;251028;251029;251030;251031;251032;251033;251034;251035;251036;251037;251038;251039;251040;251041;251042;251043;251044;251045;251046;251047;251048;251049;251050;251051;251052;251053;251054;251055;251056;251057;251058;251059;251060;251061;251062 251034 37 NMLDTRVEGDVDVPK Unmodified 1686.8247 0.82468476 3954 Q96QA5 GSDMA Gasdermin-A yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 62.283 62.273 3 0.045003 71225 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 26.148 14.877 38347000 0 0 0 9869800 2402900 2694300 0 5346800 0 5357400 4908900 7767200 0 0 0 38073 3954 33968 317181;317182;317183;317184;317185;317186;317187 251063;251064 251064 2 NMLDTRVEGDVDVPK Oxidation (M) 1702.8196 0.81959938 3954 Q96QA5 GSDMA Gasdermin-A yes yes 0 1 1 By MS/MS By matching By MS/MS 10 0 3 1 1 1 51.372 51.039 3 0.0011101 58526 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 44.807 28.141 88447000 0 0 0 54570000 16323000 0 0 17553000 0 0 0 0 0 0 0 38074 3954 33968 317188;317189;317190 251065 251065 5440 1 NMLFSGTNIAAGK Oxidation (M) 1338.6602 0.66018561 1041 P16615;O14983 ATP2A2;ATP2A1 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 yes no 0 1 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 8 3.46 2 6 1 1 1 1 1 1 1 1 60.581 59.027 2 0.0022191 66855 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 54.094 35.314 63520000 11828000 0 1162300 0 0 0 11438000 0 8909100 8533100 0 12909000 8740900 0 0 38075 1041 33969 317191;317192;317193;317194;317195;317196;317197;317198 251066;251067;251068;251069 251069 1464 4 NMLFSGTNIAAGK Unmodified 1322.6653 0.66527099 1041 P16615;O14983 ATP2A2;ATP2A1 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 71.153 70.594 2 0.0069439 80541 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.699 46.633 63295000 12329000 0 0 1214400 3014800 4282700 2672200 5820400 3909000 5064400 4314100 5683000 3786200 3031900 8173200 38076 1041 33969 317199;317200;317201;317202;317203;317204;317205;317206;317207;317208;317209;317210;317211 251070;251071;251072;251073;251074;251075 251071 6 NMLGTLAGANSLR Oxidation (M) 1332.682 0.68198369 2346 Q13835 PKP1 Plakophilin-1 yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 57.809 57.556 2 0.0033839 65183 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 49.466 21.642 31233000 0 0 0 14193000 0 0 0 17040000 0 0 0 0 0 0 0 38077 2346 33970 317212;317213 251076;251077 251076 3820 2 NMLGTLAGANSLR Unmodified 1316.6871 0.68706906 2346 Q13835 PKP1 Plakophilin-1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 74.855 74.687 2 0.0027125 85942 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 69.451 47.214 24549000 0 0 0 2893700 0 0 0 21655000 0 0 0 0 0 0 0 38078 2346 33970 317214;317215 251078;251079;251080 251079 3 NMLTSSGASFTYVK Unmodified 1504.7232 0.7231798 2838 Q63HN8 RNF213 E3 ubiquitin-protein ligase RNF213 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 77.955 71.502 2 2.8647E-29 92337 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 169.82 158.6 57457000 38579000 18878000 0 0 0 0 0 0 0 0 0 0 0 0 0 38079 2838 33971 317216;317217 251081;251082 251082 2 NMLVQESQQFK Unmodified 1350.6602 0.66018561 610 O94964 SOGA1 Protein SOGA1;N-terminal form;C-terminal 80 kDa form yes yes 0 0 0 By MS/MS 2 0 1 1 63.044 57.15 2 0.032433 73359 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 59.052 38.182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38080 610 33972 317218 251083 251083 1 NMMAACDPR 2 Oxidation (M) 1096.41 0.40998428 1963;842;4160;2350;4182;2306;2678 P07437;A6NNZ2;P68371;Q13509;Q13885;Q9BVA1;Q3ZCM7;Q9BUF5 TUBB;TUBB4B;TUBB3;TUBB2A;TUBB2B;TUBB8;TUBB6 Tubulin beta chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-4B chain;Tubulin beta-3 chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-8 chain;Tubulin beta-6 chain no no 0 2 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.1881 7.3117 2 0.00094218 5101 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 124.98 120 919650000 0 0 0 42815000 44975000 50984000 58488000 51980000 54802000 69335000 148630000 89974000 143410000 84803000 79463000 38081 842;1963;2306;2350;4182;2678;4160 33973 317219;317220;317221;317222;317223;317224;317225;317226;317227;317228;317229;317230 251084;251085;251086;251087;251088;251089;251090;251091;251092;251093;251094;251095 251085 1045;1046 12 NMMAACDPR Oxidation (M) 1080.4151 0.41506966 1963;842;4160;2350;4182;2306;2678 P07437;A6NNZ2;P68371;Q13509;Q13885;Q9BVA1;Q3ZCM7;Q9BUF5 TUBB;TUBB4B;TUBB3;TUBB2A;TUBB2B;TUBB8;TUBB6 Tubulin beta chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-4B chain;Tubulin beta-3 chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-8 chain;Tubulin beta-6 chain no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 14.759 14.926 2 0.0022544 15019 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 94.114 83.7 1239300000 0 0 0 73924000 76372000 66604000 77099000 72325000 56224000 100760000 148440000 148500000 173100000 125630000 120330000 38082 842;1963;2306;2350;4182;2678;4160 33973 317231;317232;317233;317234;317235;317236;317237;317238;317239;317240;317241;317242;317243;317244;317245;317246;317247;317248;317249;317250;317251;317252;317253;317254 251096;251097;251098;251099;251100;251101;251102;251103;251104;251105;251106;251107;251108;251109;251110;251111;251112;251113;251114;251115;251116;251117 251112 1045;1046 22 NMMAACDPR Unmodified 1064.4202 0.42015503 1963;842;4160;2350;4182;2306;2678 P07437;A6NNZ2;P68371;Q13509;Q13885;Q9BVA1;Q3ZCM7;Q9BUF5 TUBB;TUBB4B;TUBB3;TUBB2A;TUBB2B;TUBB8;TUBB6 Tubulin beta chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-4B chain;Tubulin beta-3 chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-8 chain;Tubulin beta-6 chain no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.597 26.798 2 0.0091747 29079 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 67.494 63.559 1004900000 0 0 0 65393000 46497000 55747000 59854000 82431000 35779000 73412000 110440000 160390000 130880000 72154000 111930000 38083 842;1963;2306;2350;4182;2678;4160 33973 317255;317256;317257;317258;317259;317260;317261;317262;317263;317264;317265;317266 251118;251119;251120;251121;251122;251123;251124;251125;251126;251127;251128;251129;251130 251119 9 NMMGTMIQK Unmodified 1052.4817 0.48169266 2042 Q00653 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 49.193 46.676 2 0.010164 51005 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.734 43.052 73602000 0 64072000 0 0 0 0 0 0 0 0 0 0 0 0 9529900 38084 2042 33974 317267;317268 251131;251132 251132 2 NMMGTMIQK 3 Oxidation (M) 1100.4664 0.46643653 2042 Q00653 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit yes yes 0 3 0 By MS/MS 2 0 1 1 10.833 6.9595 2 0.033938 11188 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.246 24.516 4328400 4328400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38085 2042 33974 317269 251133 251133 1 NMMNHSQVGQGIGIPSR 2 Oxidation (M) 1856.8621 0.86214967 4779 Q9NZN8 CNOT2 CCR4-NOT transcription complex subunit 2 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 42.349 42.436 3 3.2966E-19 46767 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 102.08 97.535 111380000 0 0 0 8956900 11510000 12638000 11367000 0 10478000 0 13891000 25563000 0 16978000 0 38086 4779 33975 317270;317271;317272;317273;317274;317275;317276;317277 251134;251135;251136;251137;251138;251139;251140;251141 251139 6148;6149 8 NMMNHSQVGQGIGIPSR Unmodified 1824.8723 0.87232043 4779 Q9NZN8 CNOT2 CCR4-NOT transcription complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 55.448 55.793 3 0.0042035 62497 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.687 30.248 24279000 0 0 0 0 0 0 0 0 0 4779400 3746600 0 0 4270300 11483000 38087 4779 33975 317278;317279;317280;317281 251142 251142 1 NMMNHSQVGQGIGIPSR Oxidation (M) 1840.8672 0.86723505 4779 Q9NZN8 CNOT2 CCR4-NOT transcription complex subunit 2 yes yes 0 1 0 By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 47.151 47.489 3 0.0024929 52464 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.543 36.794 44807000 0 0 0 0 0 0 3850300 3185900 3854100 6990200 7751900 6620000 0 4976600 7578200 38088 4779 33975 317282;317283;317284;317285;317286;317287;317288;317289 251143 251143 6148;6149 0 NMMPSSFAMK Unmodified 1142.4923 0.49225735 410 O60524 NEMF Nuclear export mediator factor NEMF yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 72.304 65.298 2 0.021849 83210 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 63.534 52.123 41836000 17449000 24387000 0 0 0 0 0 0 0 0 0 0 0 0 0 38089 410 33976 317290;317291 251144 251144 1 NMNLPEIPR Oxidation (M) 1098.5492 0.5491786 3628 Q92572 AP3S1 AP-3 complex subunit sigma-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 2 54.286 54.551 2 0.0033673 61171 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 83.265 58.489 90081000 0 0 0 7342200 0 9596300 0 0 0 14808000 16223000 10329000 11046000 5902000 14834000 38090 3628 33977 317292;317293;317294;317295;317296;317297;317298;317299;317300 251145;251146;251147;251148;251149;251150;251151;251152 251151 5124 8 NMNLPEIPR Unmodified 1082.5543 0.55426398 3628 Q92572 AP3S1 AP-3 complex subunit sigma-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 70.482 70.477 2 0.0040136 80998 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 98.629 63.698 85033000 0 0 0 6800100 3713600 10263000 14767000 0 7732900 0 14355000 15556000 11846000 0 0 38091 3628 33977 317301;317302;317303;317304;317305;317306;317307;317308 251153;251154;251155;251156;251157;251158;251159;251160 251153 8 NMPGLSAATLASLGGTSSR Unmodified 1789.8992 0.89924668 2661 Q32MZ4 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 83.126 83.316 3 0.0014922 96147 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 29.444 26.215 9868200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9868200 38092 2661 33978 317309 251161 251161 1 NMPVSFEVIK Unmodified 1162.6056 0.60563084 4647 Q9NUL3 STAU2 Double-stranded RNA-binding protein Staufen homolog 2 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 36.318 36.417 2 0.030285 40132 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 43.083 4.1204 6764800 0 0 0 0 0 2339700 0 2269200 2155900 0 0 0 0 0 0 38093 4647 33979 317310;317311;317312 251162 251162 1 NMQDLVEDFK Oxidation (M) 1253.5598 0.55980286 74 CON__P13647;P13647 KRT5 Keratin, type II cytoskeletal 5 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 2 1 1 1 1 1 1 1 1 1 58.62 58.579 2 0.0002257 67777 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 138.98 26.133 + 2421300000 0 0 0 689450000 141250000 185310000 160080000 283030000 110980000 222700000 212440000 0 299170000 116900000 0 38094 74 33980 317313;317314;317315;317316;317317;317318;317319;317320;317321;317322;317323 251163;251164;251165;251166;251167;251168;251169;251170;251171;251172;251173;251174;251175;251176;251177;251178;251179;251180;251181;251182;251183;251184 251180 102 22 NMQDLVEDFK Unmodified 1237.5649 0.56488824 74 CON__P13647;P13647 KRT5 Keratin, type II cytoskeletal 5 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 2 1 2 1 1 1 2 1 2 2 1 1 78.219 78.255 2 0.00049971 89572 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 124.92 12.975 + 3335000000 0 0 0 530280000 158920000 236420000 110820000 608220000 149050000 341100000 263780000 284220000 285670000 167950000 198610000 38095 74 33980 317324;317325;317326;317327;317328;317329;317330;317331;317332;317333;317334;317335;317336;317337;317338;317339;317340 251185;251186;251187;251188;251189;251190;251191;251192;251193;251194;251195;251196;251197;251198;251199;251200;251201;251202;251203;251204;251205;251206 251190 22 NMQDLVEDLK Oxidation (M) 1219.5755 0.57545293 66;779 P04259;CON__P04259 KRT6B Keratin, type II cytoskeletal 6B no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 54.647 54.837 2 0.00028979 62088 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 136.57 83.4 + 462650000 0 0 0 78463000 0 19403000 48834000 51026000 10497000 28463000 20098000 20710000 165520000 16322000 3317100 38096 779;66 33981 317341;317342;317343;317344;317345;317346;317347;317348;317349;317350;317351 251207;251208;251209;251210;251211;251212;251213;251214;251215;251216;251217;251218;251219;251220;251221;251222;251223;251224;251225;251226 251222 74 20 NMQDLVEDLK Unmodified 1203.5805 0.58053831 66;779 P04259;CON__P04259 KRT6B Keratin, type II cytoskeletal 6B no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.648 76.742 2 0.0017445 88717 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 119.75 99.97 + 632060000 0 0 0 74595000 0 16883000 30704000 71881000 15758000 40021000 32905000 44009000 245270000 34794000 25237000 38097 779;66 33981 317352;317353;317354;317355;317356;317357;317358;317359;317360;317361;317362;317363 251227;251228;251229;251230;251231;251232;251233;251234;251235;251236;251237;251238;251239 251235 13 NMQDMVEDYR 2 Oxidation (M) 1331.5122 0.51220074 780 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 47 11 4 3 3 6 3 3 3 3 3 2 3 26.733 26.861 2 6.4886E-05 27508 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 141.48 136.49 + 7450300000 0 0 0 1724600000 534190000 367110000 419390000 1120500000 398880000 631550000 268140000 776130000 828980000 192200000 188650000 38098 780 33982 317364;317365;317366;317367;317368;317369;317370;317371;317372;317373;317374;317375;317376;317377;317378;317379;317380;317381;317382;317383;317384;317385;317386;317387;317388;317389;317390;317391;317392;317393;317394;317395;317396;317397;317398;317399;317400;317401;317402;317403;317404;317405;317406;317407;317408;317409;317410 251240;251241;251242;251243;251244;251245;251246;251247;251248;251249;251250;251251;251252;251253;251254;251255;251256;251257;251258;251259;251260;251261;251262;251263;251264;251265;251266;251267;251268;251269;251270;251271;251272;251273;251274;251275;251276;251277;251278;251279;251280;251281;251282;251283;251284;251285;251286;251287;251288;251289;251290;251291;251292;251293;251294;251295;251296 251260 938;939 53 NMQDMVEDYR Oxidation (M) 1315.5173 0.51728612 780 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 42 4 3 4 3 7 3 3 3 4 3 3 2 40.36 40.516 2 6.3554E-24 46435 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 176.6 173.03 + 14414000000 0 0 0 3006300000 792210000 931790000 573820000 2046600000 549010000 1254300000 1176100000 1889700000 1331500000 607010000 255110000 38099 780 33982 317411;317412;317413;317414;317415;317416;317417;317418;317419;317420;317421;317422;317423;317424;317425;317426;317427;317428;317429;317430;317431;317432;317433;317434;317435;317436;317437;317438;317439;317440;317441;317442;317443;317444;317445;317446;317447;317448;317449;317450;317451;317452 251297;251298;251299;251300;251301;251302;251303;251304;251305;251306;251307;251308;251309;251310;251311;251312;251313;251314;251315;251316;251317;251318;251319;251320;251321;251322;251323;251324;251325;251326;251327;251328;251329;251330;251331;251332;251333;251334;251335;251336;251337;251338;251339;251340;251341;251342;251343;251344;251345;251346;251347;251348;251349;251350;251351;251352;251353;251354;251355;251356;251357;251358;251359;251360 251342 938;939 64 NMQDMVEDYR Unmodified 1299.5224 0.5223715 780 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.78 56.9 2 3.4949E-42 64161 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 186.25 133.08 + 7536800000 0 0 0 1229100000 427870000 506800000 258000000 1725100000 317200000 548700000 507400000 919900000 450160000 318810000 327740000 38100 780 33982 317453;317454;317455;317456;317457;317458;317459;317460;317461;317462;317463;317464 251361;251362;251363;251364;251365;251366;251367;251368;251369;251370;251371;251372;251373;251374;251375;251376;251377;251378;251379;251380;251381;251382;251383;251384;251385;251386;251387;251388;251389 251383 29 NMQDMVEDYRNK 2 Oxidation (M) 1573.6501 0.65009121 780 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 2 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.05 2.54 9 3 86 2 6 4 9 9 6 7 8 8 9 6 4 7 7 6 20.262 20.062 2;3 2.5789E-52 20513 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 204.64 193.54 + 22934000000 17910000 172630000 97966000 4146600000 1091700000 2198600000 1223800000 2704300000 1671500000 2371600000 1527300000 1242300000 2712700000 1052200000 702660000 38101 780 33983 317465;317466;317467;317468;317469;317470;317471;317472;317473;317474;317475;317476;317477;317478;317479;317480;317481;317482;317483;317484;317485;317486;317487;317488;317489;317490;317491;317492;317493;317494;317495;317496;317497;317498;317499;317500;317501;317502;317503;317504;317505;317506;317507;317508;317509;317510;317511;317512;317513;317514;317515;317516;317517;317518;317519;317520;317521;317522;317523;317524;317525;317526;317527;317528;317529;317530;317531;317532;317533;317534;317535;317536;317537;317538;317539;317540;317541;317542;317543;317544;317545;317546;317547;317548;317549;317550;317551;317552;317553;317554;317555;317556;317557;317558;317559;317560;317561;317562 251390;251391;251392;251393;251394;251395;251396;251397;251398;251399;251400;251401;251402;251403;251404;251405;251406;251407;251408;251409;251410;251411;251412;251413;251414;251415;251416;251417;251418;251419;251420;251421;251422;251423;251424;251425;251426;251427;251428;251429;251430;251431;251432;251433;251434;251435;251436;251437;251438;251439;251440;251441;251442;251443;251444;251445;251446;251447;251448;251449;251450 251420 938;939 40 NMQDMVEDYRNK Oxidation (M) 1557.6552 0.65517659 780 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.14 2.45 10 2 97 4 6 2 10 8 8 5 10 9 10 7 8 8 8 6 35.91 35.543 2;3 4.2566E-259 39078 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 254.19 247.75 + 41640000000 114420000 443550000 112420000 5720400000 1622000000 3461400000 1791900000 6317100000 3431900000 2575600000 3468000000 4322200000 3419000000 2339000000 2501600000 38102 780 33983 317563;317564;317565;317566;317567;317568;317569;317570;317571;317572;317573;317574;317575;317576;317577;317578;317579;317580;317581;317582;317583;317584;317585;317586;317587;317588;317589;317590;317591;317592;317593;317594;317595;317596;317597;317598;317599;317600;317601;317602;317603;317604;317605;317606;317607;317608;317609;317610;317611;317612;317613;317614;317615;317616;317617;317618;317619;317620;317621;317622;317623;317624;317625;317626;317627;317628;317629;317630;317631;317632;317633;317634;317635;317636;317637;317638;317639;317640;317641;317642;317643;317644;317645;317646;317647;317648;317649;317650;317651;317652;317653;317654;317655;317656;317657;317658;317659;317660;317661;317662;317663;317664;317665;317666;317667;317668;317669;317670;317671 251451;251452;251453;251454;251455;251456;251457;251458;251459;251460;251461;251462;251463;251464;251465;251466;251467;251468;251469;251470;251471;251472;251473;251474;251475;251476;251477;251478;251479;251480;251481;251482;251483;251484;251485;251486;251487;251488;251489;251490;251491;251492;251493;251494;251495;251496;251497;251498;251499;251500;251501;251502;251503;251504;251505;251506;251507;251508;251509;251510;251511;251512;251513;251514;251515;251516;251517;251518;251519;251520;251521;251522;251523;251524;251525;251526;251527;251528;251529;251530;251531;251532;251533;251534;251535;251536;251537;251538;251539 251496 938;939 74 NMQDMVEDYRNK Unmodified 1541.6603 0.66026197 780 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.7 2.95 6 31 2 2 2 3 2 3 2 4 2 3 2 3 3 2 2 50.802 49.918 2;3 3.6301E-126 64337 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 260.76 250.45 + 29404000000 165720000 248100000 118060000 5480200000 936530000 2361300000 1105300000 4660800000 1556500000 2215600000 2322500000 2502000000 2644600000 1423500000 1663200000 38103 780 33983 317672;317673;317674;317675;317676;317677;317678;317679;317680;317681;317682;317683;317684;317685;317686;317687;317688;317689;317690;317691;317692;317693;317694;317695;317696;317697;317698;317699;317700;317701;317702;317703;317704;317705;317706;317707;317708 251540;251541;251542;251543;251544;251545;251546;251547;251548;251549;251550;251551;251552;251553;251554;251555;251556;251557;251558;251559;251560;251561;251562;251563;251564;251565;251566;251567;251568;251569;251570;251571;251572 251547 28 NMQDMVEDYRNKYEDEINK 2 Oxidation (M) 2465.0475 0.047503417 780 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 2 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.78 1.3 1 36 1 3 2 2 4 3 3 3 3 5 2 4 2 52.475 52.426 2;3;4 7.7628E-46 58780 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 125.18 122.17 + 8504600000 20002000 0 0 334030000 476470000 344040000 401410000 2141100000 318570000 1158200000 598850000 1365900000 643650000 350980000 351510000 38104 780 33984 317709;317710;317711;317712;317713;317714;317715;317716;317717;317718;317719;317720;317721;317722;317723;317724;317725;317726;317727;317728;317729;317730;317731;317732;317733;317734;317735;317736;317737;317738;317739;317740;317741;317742;317743;317744;317745 251573;251574;251575;251576;251577;251578;251579;251580;251581;251582;251583;251584;251585;251586;251587;251588;251589;251590;251591;251592;251593;251594;251595;251596;251597;251598;251599;251600;251601;251602;251603;251604;251605;251606;251607;251608;251609 251604 938;939 33 NMQDMVEDYRNKYEDEINK Oxidation (M) 2449.0526 0.052588795 780 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 1 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.62 1.7 2 40 2 3 2 2 1 5 3 5 5 4 1 6 3 63.79 63.53 3;4 4.418E-26 74970 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 125.12 122.11 + 1239100000 46745000 0 0 50461000 11811000 11551000 9482500 549310000 29252000 139130000 102990000 161870000 5186700 67461000 53851000 38105 780 33984 317746;317747;317748;317749;317750;317751;317752;317753;317754;317755;317756;317757;317758;317759;317760;317761;317762;317763;317764;317765;317766;317767;317768;317769;317770;317771;317772;317773;317774;317775;317776;317777;317778;317779;317780;317781;317782;317783;317784;317785;317786;317787 251610;251611;251612;251613;251614;251615;251616;251617;251618;251619;251620;251621;251622;251623;251624;251625;251626;251627;251628;251629;251630;251631 251625 938;939 19 NMQDMVEDYRNKYEDEINK Unmodified 2433.0577 0.057674173 780 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 2 By MS/MS 2 0 1 1 80.266 72.135 4 0.0011702 94539 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.347 45.347 + 125960000 125960000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38106 780 33984 317788 251632 251632 1 NMQFSNTPDSGVSLLHK Unmodified 1873.8992 0.89924668 4774 Q9NZM3 ITSN2 Intersectin-2 yes yes 0 0 0 By MS/MS 2 0 1 1 76.229 68.098 3 0.00025626 89847 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.026 45.904 9034900 9034900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38107 4774 33985 317789 251633 251633 1 NMQLTAGSK Oxidation (M) 964.46478 0.46478027 560 O75934 BCAS2 Pre-mRNA-splicing factor SPF27 yes yes 0 1 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 8.3803 8.1475 2 0.0058776 5955 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.224 35.753 33786000 0 19886000 0 0 462940 847360 0 0 1241300 1862300 0 3247900 1325000 1615400 3297400 38108 560 33986 317790;317791;317792;317793;317794;317795;317796;317797;317798 251634;251635;251636 251635 723 3 NMQNVEHVPLSLDR Oxidation (M) 1666.8097 0.80970339 1107 P20618 PSMB1 Proteasome subunit beta type-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 13 1 1 1 1 1 1 2 2 1 2 54.842 55.06 2;3 3.3703E-12 62131 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 103.35 77.69 328790000 0 0 0 41500000 14328000 21794000 0 17351000 0 24278000 6980400 72277000 25038000 5505400 99738000 38109 1107 33987 317799;317800;317801;317802;317803;317804;317805;317806;317807;317808;317809;317810;317811 251637;251638;251639;251640;251641;251642 251641 1595 3 NMQNVEHVPLSLDR Unmodified 1650.8148 0.81478877 1107 P20618 PSMB1 Proteasome subunit beta type-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 1 1 1 1 1 2 2 63.743 63.876 2;3 7.7273E-06 72329 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 80.632 76.066 294920000 0 0 0 12565000 3686800 9770500 5965300 10319000 6305400 11424000 30355000 22888000 10467000 40430000 130740000 38110 1107 33987 317812;317813;317814;317815;317816;317817;317818;317819;317820;317821;317822;317823;317824;317825 251643;251644;251645;251646;251647;251648;251649;251650;251651;251652;251653;251654;251655;251656 251653 13 NMQQSRPFIGMSSAPR Unmodified 1805.8665 0.86650677 4814 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 53.626 54.054 3 0.030893 60747 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 27.85 22.641 13014000 0 0 0 0 0 0 0 0 0 0 0 0 0 3714000 9300100 38111 4814 33988 317826;317827 251657;251658 251658 2 NMSGSLYEMVSR Oxidation (M) 1388.6064 0.60643548 2163 Q08945 SSRP1 FACT complex subunit SSRP1 yes yes 0 1 0 By MS/MS 10 0 1 1 61.228 61.226 2 0.029352 70013 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 48.44 29.169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38112 2163 33989 317828 251659 251659 1 NMSHCRQPSDSSVDK Oxidation (M) 1762.7363 0.73628045 1469 P42858 HTT Huntingtin yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 6.9185 4.0522 3 0.00038128 7044 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.344 55.957 31920000 26198000 0 5722500 0 0 0 0 0 0 0 0 0 0 0 0 38113 1469 33990 317829;317830 251660;251661 251660 2308 2 NMSHCRQPSDSSVDK Unmodified 1746.7414 0.74136583 1469 P42858 HTT Huntingtin yes yes 0 0 1 By MS/MS 2 0 1 1 12.074 8.1316 3 0.00038378 12652 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.594 57.618 12990000 12990000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38114 1469 33990 317831 251662 251662 1 NMSIIDAFK Unmodified 1037.5216 0.52156686 1614 P49959 MRE11A Double-strand break repair protein MRE11A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.874 79.932 2 0.0095172 91923 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.504 50.657 86626000 0 0 0 3931300 3576700 6326000 4680500 9436800 5080000 8127900 7300400 9895600 5138800 6620300 16511000 38115 1614 33991 317832;317833;317834;317835;317836;317837;317838;317839;317840;317841;317842;317843 251663;251664;251665;251666;251667;251668;251669 251666 7 NMSVHLSPCFR Oxidation (M) 1362.6173 0.61727494 1888 P62280 RPS11 40S ribosomal protein S11 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 47.349 47.509 3 0.002361 52163 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.841 45.211 124750000 0 0 0 13813000 0 12366000 0 14777000 11026000 21814000 25957000 0 0 0 24994000 38116 1888 33992 317844;317845;317846;317847;317848;317849;317850 251670;251671 251670 3060 1 NMSVHLSPCFR Unmodified 1346.6224 0.62236032 1888 P62280 RPS11 40S ribosomal protein S11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 60.442 60.51 3 0.020761 68234 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 38.021 34.834 101180000 0 0 0 3327700 4614700 6098100 3585100 12040000 7489400 6306700 12599000 0 8109300 12166000 24848000 38117 1888 33992 317851;317852;317853;317854;317855;317856;317857;317858;317859;317860;317861 251672 251672 1 NMSVIAHVDHGK Unmodified 1306.6452 0.64520425 980 P13639 EEF2 Elongation factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 32 2 2 3 2 2 3 3 4 4 2 2 3 29.689 29.937 2;3 7.591E-09 31775 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 128.01 101.91 1518800000 0 0 0 27021000 14925000 42930000 28363000 27290000 26528000 62423000 179260000 188840000 27367000 137360000 756520000 38118 980 33993 317862;317863;317864;317865;317866;317867;317868;317869;317870;317871;317872;317873;317874;317875;317876;317877;317878;317879;317880;317881;317882;317883;317884;317885;317886;317887;317888;317889;317890;317891;317892;317893 251673;251674;251675;251676;251677;251678;251679;251680;251681;251682;251683;251684 251679 3 NMSVIAHVDHGK Oxidation (M) 1322.6401 0.64011887 980 P13639 EEF2 Elongation factor 2 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 16.406 16.799 3 0.0010083 16993 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 78.903 67.798 453360000 0 0 0 0 0 0 0 0 0 34096000 126660000 2426800 45503000 0 244670000 38119 980 33993 317894;317895;317896;317897;317898 251685;251686;251687;251688 251685 1313 2 NMSYQGFTK Unmodified 1074.4804 0.48043033 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.658 41.836 2 0.034577 45583 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 46.457 31.921 169760000 0 0 0 5455700 5765100 15270000 6767700 8242600 6447200 18554000 22734000 20167000 13438000 15142000 31778000 38120 4819 33994 317899;317900;317901;317902;317903;317904;317905;317906;317907;317908;317909;317910 251689 251689 1 NMSYQGFTK Oxidation (M) 1090.4753 0.47534495 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 1 0 By MS/MS By matching By matching 10 0 3 1 1 1 27.673 27.865 2 0.038864 29965 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 40.002 27.645 16940000 0 0 0 3856000 0 0 0 0 6209400 0 0 0 0 0 6874400 38121 4819 33994 317911;317912;317913 251690 251690 1 NMTHQVQAER Unmodified 1212.567 0.56695393 3859 Q96GX5 MASTL Serine/threonine-protein kinase greatwall yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 8 1 1 1 1 1 1 1 1 10.348 10.479 3 0.027545 8839 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 32.523 24.957 19391000 0 0 0 0 1898800 1784400 0 1782400 1145800 2451700 0 4888400 3125200 2314500 0 38122 3859 33995 317914;317915;317916;317917;317918;317919;317920;317921 251691 251691 1 NMTHQVQAERDALALSK Oxidation (M) 1926.9582 0.95815855 3859 Q96GX5 MASTL Serine/threonine-protein kinase greatwall yes yes 0 1 1 By MS/MS 2 0 1 1 48.918 41.092 3 0.0045992 56814 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 44.807 29.848 19131000 19131000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38123 3859 33996 317922 251692 251692 5369 1 NMTPGQNREQR Unmodified 1329.6208 0.62078041 1600 P49790 NUP153 Nuclear pore complex protein Nup153 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 6.9488 7.0556 3 0.0099806 5394 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 36.982 33.265 38343000 0 0 0 2402300 0 2423300 3396100 4785200 4410500 5134600 0 4275300 4897800 6617500 0 38124 1600 33997 317923;317924;317925;317926;317927;317928;317929;317930;317931 251693;251694;251695;251696 251696 4 NMTVEQLLTGSPTSPTVEPEKPTR Oxidation (M) 2627.3112 0.31124632 4287 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 75.004 75.162 3 2.5627E-35 86766 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 101.41 95.438 87501000 0 0 0 0 0 8199300 5195900 5907400 6914500 12867000 7597500 13680000 7741500 5472900 13925000 38125 4287 33998 317932;317933;317934;317935;317936;317937;317938;317939;317940;317941 251697;251698;251699;251700;251701;251702;251703;251704;251705;251706;251707;251708 251708 5753 12 NMVIMPGYCVQGTVGHK Unmodified 1889.895 0.8950297 2789 Q5TA45 CPSF3L Integrator complex subunit 11 yes yes 0 0 0 By MS/MS 2 0 1 1 78.347 70.216 3 0.00033886 92425 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.768 50.419 7979700 7979700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38126 2789 33999 317942 251709 251709 1 NMVRGLDEDETNFLDEVSRQQELIEK Oxidation (M) 3122.4826 0.48262176 4308 Q9GZU8 FAM192A Protein FAM192A yes yes 0 1 2 By MS/MS 2 0 1 1 90.246 82.116 4 1.3659E-107 106672 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 147.41 141.96 39924000 39924000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38127 4308 34000 317943 251710 251710 5768 1 NMVRGLDEDETNFLDEVSRQQELIEK Unmodified 3106.4877 0.48770714 4308 Q9GZU8 FAM192A Protein FAM192A yes yes 0 0 2 By MS/MS 2 0 1 1 92.95 84.82 4 6.6094E-14 109844 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.935 74.316 31295000 31295000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38128 4308 34000 317944 251711;251712 251711 2 NMVSILSSFESR Oxidation (M) 1384.6657 0.66566492 5058 Q9UPT5 EXOC7 Exocyst complex component 7 yes yes 0 1 0 By MS/MS By matching By matching By matching By matching By matching By matching 10 0 7 1 1 1 1 1 1 1 78.503 78.633 2 0.0052464 90823 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 49.5 31.681 29031000 0 0 0 0 0 5216300 4643600 3409000 3174400 5017800 3861000 0 3708800 0 0 38129 5058 34001 317945;317946;317947;317948;317949;317950;317951 251713 251713 6411 1 NMVVYAGVEEQPK Oxidation (M) 1478.7075 0.70752973 2460 Q14997 PSME4 Proteasome activator complex subunit 4 yes yes 0 1 0 By MS/MS 2 0 1 1 47.526 41.963 2 0.0018331 54575 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.397 62.495 14029000 0 14029000 0 0 0 0 0 0 0 0 0 0 0 0 0 38130 2460 34002 317952 251714 251714 4052 1 NMYPPPSFPTNK Unmodified 1391.6544 0.65437195 3084 Q7Z3K3 POGZ Pogo transposable element with ZNF domain yes yes 0 0 0 By MS/MS 2 0 1 1 66.922 61.006 2 0.026252 78105 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 51.872 42.328 38440000 0 38440000 0 0 0 0 0 0 0 0 0 0 0 0 0 38131 3084 34003 317953 251715 251715 1 NNAFPCQVNIK Unmodified 1303.6343 0.63430521 4577 Q9NQW6 ANLN Actin-binding protein anillin yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 56.22 56.456 2 0.012385 63579 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.42 49.16 10173000 0 0 0 0 0 0 0 0 0 0 0 0 10173000 0 0 38132 4577 34004 317954;317955 251716;251717 251717 2 NNALNPEEMR Unmodified 1186.5401 0.54007047 424 O60684 KPNA6 Importin subunit alpha-7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.272 38.452 2 0.0038902 41396 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 87.639 78.256 90780000 0 0 0 6233100 3821800 9509200 4774900 4785100 2750000 10960000 9110500 8590900 7066400 8783300 14394000 38133 424 34005 317956;317957;317958;317959;317960;317961;317962;317963;317964;317965;317966;317967 251718;251719;251720;251721;251722;251723;251724;251725;251726;251727 251724 10 NNALNPEEMRR Unmodified 1342.6412 0.6411815 424 O60684 KPNA6 Importin subunit alpha-7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 2 2 2 1 2 1 2 31.561 31.718 2;3 0.0012501 34496 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 52.693 46.256 417190000 0 0 0 17534000 23337000 43761000 21606000 25475000 20851000 43486000 46336000 55599000 33252000 23653000 62298000 38134 424 34006 317968;317969;317970;317971;317972;317973;317974;317975;317976;317977;317978;317979;317980;317981;317982;317983;317984;317985;317986;317987;317988;317989 251728;251729;251730;251731;251732;251733;251734;251735;251736;251737;251738;251739;251740;251741;251742;251743 251730 11 NNASHVVYPVPGNLEEEEWVRPVMK Oxidation (M) 2908.4178 0.41777708 3475 Q8TAQ2 SMARCC2 SWI/SNF complex subunit SMARCC2 yes yes 0 1 1 By MS/MS 2 0 2 2 84.8 76.67 3;4 5.5642E-09 100168 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.11 70.612 96246000 96246000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38135 3475 34007 317990;317991 251744;251745;251746 251746 5002 3 NNASHVVYPVPGNLEEEEWVRPVMK Unmodified 2892.4229 0.42286246 3475 Q8TAQ2 SMARCC2 SWI/SNF complex subunit SMARCC2 yes yes 0 0 1 By MS/MS 2 0 1 1 88.306 80.176 4 1.6463E-37 104237 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.6 104.64 58548000 58548000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38136 3475 34007 317992 251747 251747 1 NNASTDYDLSDK Unmodified 1341.5685 0.56845329 1402 P39023 RPL3 60S ribosomal protein L3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.34 1 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 33.736 33.568 2 5.3362E-09 29369 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 141.95 135.65 769690000 45253000 8481300 0 38947000 50198000 34776000 47609000 40612000 32730000 62114000 75616000 75349000 93323000 68523000 96157000 38137 1402 34008 317993;317994;317995;317996;317997;317998;317999;318000;318001;318002;318003;318004;318005;318006;318007 251748;251749;251750;251751;251752;251753;251754;251755;251756;251757;251758;251759;251760;251761 251757 13 NNAVLLR Unmodified 798.47119 0.47118627 511 O75521 ECI2 Enoyl-CoA delta isomerase 2, mitochondrial yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 31.416 31.588 2 0.043924 33043 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.035 16.915 58186000 0 0 0 4085300 4440000 4484700 5444800 4515600 2962100 6912100 5509600 6964400 0 5878100 6989400 38138 511 34009 318008;318009;318010;318011;318012;318013;318014;318015;318016;318017;318018 251762 251762 1 NNAYLAQSPQLYK Unmodified 1508.7623 0.7623425 1009 P14868 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 60.668 59.233 2 4.4786E-21 75184 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 178.84 163.23 960140000 10702000 781220000 2741700 5578700 8788800 10992000 0 9731700 7187900 15940000 17005000 23097000 13446000 13049000 40667000 38139 1009 34010 318019;318020;318021;318022;318023;318024;318025;318026;318027;318028;318029;318030;318031;318032;318033 251763;251764;251765;251766;251767;251768;251769;251770;251771;251772;251773 251765 11 NNDGEEQEVRDDNRPK Unmodified 1913.8464 0.84635949 158 O00461 GOLIM4 Golgi integral membrane protein 4 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 10.82 10.956 3 2.4576E-23 9214 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 108.71 102.87 85063000 0 0 0 7018400 2580400 5580800 4085200 4846000 4203500 6691000 6094600 14467000 8084200 6578600 14833000 38140 158 34011 318034;318035;318036;318037;318038;318039;318040;318041;318042;318043;318044;318045 251774;251775;251776;251777;251778;251779;251780 251775 6 NNDGYIDYAEFAK Unmodified 1518.6627 0.66268803 3464 Q8NI22 MCFD2 Multiple coagulation factor deficiency protein 2 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS 7.44 3.62 2 1 6 2 1 1 1 1 1 1 1 74.6 73.527 2 0.00064654 84535 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.611 64.723 383240000 0 345030000 2940200 0 0 0 2687700 4553700 0 0 8251400 6059400 0 4926300 8784900 38141 3464 34012 318046;318047;318048;318049;318050;318051;318052;318053;318054 251781;251782;251783;251784;251785;251786;251787 251784 7 NNDYQSIEELK Unmodified 1351.6256 0.62557424 4552 Q9NPI1 BRD7 Bromodomain-containing protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 53.301 53.146 2 0.00032275 60682 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 89.247 77.4 25369000 0 0 0 4838100 4191200 0 4565400 4805500 6968400 0 0 0 0 0 0 38142 4552 34013 318055;318056;318057;318058;318059 251788;251789;251790;251791;251792;251793 251793 6 NNEESPTATVAEQGEDITSK Unmodified 2118.9553 0.95530082 2294 Q13451 FKBP5 Peptidyl-prolyl cis-trans isomerase FKBP5;Peptidyl-prolyl cis-trans isomerase FKBP5, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 8.2 3.6 2 8 1 1 1 1 1 1 1 1 1 1 63.27 64.071 2;3 2.4952E-71 58644 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 153.24 147.85 110370000 37320000 21036000 0 0 2755600 5177000 0 0 1993400 3827600 5516800 5521000 0 3763200 23459000 38143 2294 34014 318060;318061;318062;318063;318064;318065;318066;318067;318068;318069 251794;251795;251796;251797;251798 251795 5 NNEESPTATVAEQGEDITSKK Unmodified 2247.0503 0.050263834 2294 Q13451 FKBP5 Peptidyl-prolyl cis-trans isomerase FKBP5;Peptidyl-prolyl cis-trans isomerase FKBP5, N-terminally processed yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 52.801 47.457 3 4.6153E-59 61371 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 135.73 130.64 57009000 0 57009000 0 0 0 0 0 0 0 0 0 0 0 0 0 38144 2294 34015 318070;318071 251799;251800 251799 2 NNEFIVIHNGIITNYK Unmodified 1887.9843 0.98429694 2125 Q06210 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 79.295 77.885 3 2.3408E-16 99637 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 99.344 78.405 83755000 51771000 0 8769000 0 0 3316200 0 3101700 0 3752700 3866300 0 0 0 9178800 38145 2125 34016 318072;318073;318074;318075;318076;318077;318078 251801;251802;251803 251802 3 NNENRENASSNHDHDDGASGTPK Unmodified 2465.0188 0.01879756 4953 Q9UK53 ING1 Inhibitor of growth protein 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 5.6507 5.79 4 4.1409E-05 3683 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 45.784 45.254 79978000 0 0 0 0 4755300 4875000 3739600 5918900 4456800 7959200 7034400 10485000 7582900 8004100 15167000 38146 4953 34017 318079;318080;318081;318082;318083;318084;318085;318086;318087;318088;318089 251804;251805;251806;251807 251807 4 NNEVSLAALK Unmodified 1057.5768 0.57677356 3087 Q7Z3U7 MON2 Protein MON2 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.12 3.89 3 1 4 1 2 1 1 1 1 1 61.912 56.232 2 0.00012191 72328 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.15 78.706 165460000 3193300 160710000 1552100 0 0 0 0 0 0 0 0 0 0 0 0 38147 3087 34018 318090;318091;318092;318093;318094;318095;318096;318097 251808;251809;251810;251811;251812;251813;251814 251808 7 NNFAALTNLQDR Unmodified 1375.6844 0.68442653 2159 Q08499 PDE4D cAMP-specific 3',5'-cyclic phosphodiesterase 4D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.29 69.368 2 0.00050526 79774 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 78.653 65.697 63351000 0 0 0 1992000 2152600 4451200 3382100 2538300 3164500 5083700 5523000 8173500 7812700 7958900 11118000 38148 2159 34019 318098;318099;318100;318101;318102;318103;318104;318105;318106;318107;318108;318109 251815;251816;251817;251818;251819;251820;251821;251822;251823;251824 251815 8 NNFAALTNLQDRAPSK Unmodified 1758.9013 0.90129559 2159 Q08499 PDE4D cAMP-specific 3',5'-cyclic phosphodiesterase 4D yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 64.406 64.633 3 0.00085263 73212 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 52.112 45.949 143420000 0 0 0 0 0 8908300 9586100 9974300 10111000 12031000 17639000 20750000 11372000 12787000 30265000 38149 2159 34020 318110;318111;318112;318113;318114;318115;318116;318117;318118;318119 251825;251826;251827;251828;251829;251830;251831;251832;251833;251834;251835 251834 8 NNFAVGYR Unmodified 939.45626 0.45626449 1485 P45880 VDAC2 Voltage-dependent anion-selective channel protein 2 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching 10 0 7 1 1 1 2 1 1 38.76 38.915 2 0.0092881 43868 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 83.377 36.713 56789000 0 0 0 17709000 0 0 0 9666500 0 11269000 1456900 0 8933200 7754600 0 38150 1485 34021 318120;318121;318122;318123;318124;318125;318126 251836;251837 251837 2 NNFEGEVTK Unmodified 1036.4825 0.48253882 838 P07237 P4HB Protein disulfide-isomerase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 25.243 25.441 2 0.0052744 25655 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.192 68.205 163830000 0 0 0 8945800 6316300 6667600 0 13525000 4570900 0 0 25351000 9208500 26552000 62695000 38151 838 34022 318127;318128;318129;318130;318131;318132;318133;318134;318135;318136 251838;251839;251840;251841;251842;251843;251844 251839 7 NNFGAEPPHQNGECYPNEK Unmodified 2200.9232 0.9232296 3633 Q92598 HSPH1 Heat shock protein 105 kDa yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.91 3.42 2 1 8 1 2 1 1 1 1 1 1 1 1 38.575 37.201 3 7.0641E-72 47696 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.19 121.61 428870000 12532000 338370000 0 2994300 1823900 3145800 0 0 0 6189200 12774000 14280000 0 7881300 28875000 38152 3633 34023 318137;318138;318139;318140;318141;318142;318143;318144;318145;318146;318147 251845;251846;251847;251848;251849;251850;251851;251852;251853;251854;251855 251848 11 NNFIPQPIGK Unmodified 1126.6135 0.61349341 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 0 0 By MS/MS 2 0 1 1 68.432 62.532 2 0.011884 79932 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.485 59.957 125410000 0 125410000 0 0 0 0 0 0 0 0 0 0 0 0 0 38153 619 34024 318148 251856 251856 1 NNFLNSLPEEMESLVR Oxidation (M) 1906.9095 0.90947702 4468 Q9H9A6 LRRC40 Leucine-rich repeat-containing protein 40 yes yes 0 1 0 By MS/MS 10 0 1 1 83.014 83.114 2 0.0086484 96232 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 50.354 36.545 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38154 4468 34025 318149 251857 251857 5907 1 NNFLPNADMETR Unmodified 1420.6405 0.6405128 3701 Q93008 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 61.717 61.98 2 0.0049742 70632 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.806 46.119 59473000 0 0 0 0 0 9308900 3824300 4667200 0 0 9006400 8421100 4426200 5762500 14056000 38155 3701 34026 318150;318151;318152;318153;318154;318155;318156;318157 251858;251859;251860;251861;251862 251862 5 NNFQQQQNAREK Unmodified 1503.7179 0.71785192 5338 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 2 1 1 22.109 22.129 3 0.019881 23121 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 28.764 13.377 + 41884000 0 0 0 9537800 14557000 0 0 0 0 0 4105300 0 0 13684000 0 38156 5338 34027 318158;318159;318160;318161;318162 251863 251863 1 NNFTDFTNVR Unmodified 1226.568 0.56799978 4568 Q9NQE9 HINT3 Histidine triad nucleotide-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.263 62.36 2 0.00052294 71149 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 133.86 121.34 110050000 0 0 0 7518800 7248600 7638100 8490600 8265500 5189400 9446700 12120000 15680000 8288100 9294000 10869000 38157 4568 34028 318163;318164;318165;318166;318167;318168;318169;318170;318171;318172;318173;318174 251864;251865;251866;251867;251868;251869;251870;251871;251872;251873;251874;251875;251876;251877 251870 14 NNGDFFIANEGR Unmodified 1352.6109 0.61092723 3830 Q96EZ8 MCRS1 Microspherule protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 60.568 60.659 2 0.0030851 69173 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 61.353 38.613 17731000 0 0 0 0 2809800 0 2714800 5189400 0 0 0 0 0 0 7017500 38158 3830 34029 318175;318176;318177;318178 251878;251879;251880 251878 3 NNGESWELMDSAGNK Unmodified 1650.6944 0.69439886 399 O60437 PPL Periplakin yes yes 0 0 0 By MS/MS 2 0 1 1 65.446 59.529 2 0.0007528 76140 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.477 91.46 23039000 0 23039000 0 0 0 0 0 0 0 0 0 0 0 0 0 38159 399 34030 318179 251881 251881 1 NNGGAAAMEK Unmodified 961.42873 0.42872911 5261 Q9Y617 PSAT1 Phosphoserine aminotransferase yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 8.0879 4.6448 2 0.020154 6777 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.654 36.141 89247000 17691000 71556000 0 0 0 0 0 0 0 0 0 0 0 0 0 38160 5261 34031 318180;318181 251882;251883 251882 2 NNGQVYTYPDGK Unmodified 1354.6153 0.61534391 2120 Q05BQ5 MBTD1 MBT domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 32.625 32.695 2 0.034054 34741 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 50.108 38.956 7628400 0 0 0 0 2126000 0 0 2457200 0 0 3045200 0 0 0 0 38161 2120 34032 318182;318183;318184;318185 251884;251885;251886 251885 3 NNGVLFENQLLQIGVK Unmodified 1784.9785 0.97848328 689 O95782 AP2A1 AP-2 complex subunit alpha-1 yes yes 0 0 0 By MS/MS 2 0 1 1 95.847 87.717 2 1.6432E-10 113423 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 108.9 93.039 10273000 10273000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38162 689 34033 318186 251887 251887 1 NNHCGIATAASYPNV Unmodified 1587.71 0.70998935 444 O60911 CTSV Cathepsin L2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 55.29 54.408 2 1.3037E-18 62599 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 133.81 129.19 81648000 0 22143000 0 42501000 2611800 0 5662800 2671300 0 0 3835000 0 0 2223700 0 38163 444 34034 318187;318188;318189;318190;318191;318192;318193 251888;251889 251889 2 NNHHEENISSK Unmodified 1307.5854 0.58544076 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.5 0.5 3 3 2 3 1 5.1539 1.9676 2;3 1.7459E-181 5175 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 261.52 207.76 821320000 405420000 263150000 152760000 0 0 0 0 0 0 0 0 0 0 0 0 38164 2344 34035 318194;318195;318196;318197;318198;318199 251890;251891;251892;251893;251894;251895;251896;251897 251893 8 NNHIVAEDPSK Unmodified 1222.5942 0.59421454 4814 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.6 1.74 1 19 1 2 2 2 2 2 1 1 1 1 1 2 2 15.046 14.999 2;3 0.00022712 13757 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 106.4 91.624 220820000 0 11446000 0 15239000 10421000 10863000 16287000 13913000 10361000 3673100 21706000 27941000 14837000 22123000 42009000 38165 4814 34036 318200;318201;318202;318203;318204;318205;318206;318207;318208;318209;318210;318211;318212;318213;318214;318215;318216;318217;318218;318219 251898;251899;251900;251901;251902;251903;251904;251905;251906;251907;251908;251909;251910;251911;251912;251913;251914 251903 15 NNIEDVR Unmodified 858.41954 0.41954463 234 O14976 GAK Cyclin-G-associated kinase yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 17.304 17.859 2 0.046957 17801 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 65.676 12.122 49530000 0 0 0 0 0 0 0 0 0 0 0 24056000 0 0 25474000 38166 234 34037 318220;318221 251915;251916 251916 2 NNIIQTWR Unmodified 1043.5512 0.55122751 1440 P41250 GARS Glycine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 55.913 56.122 2 0.0059797 62558 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 104.75 72.812 174240000 0 0 0 0 4167300 9683600 0 10145000 5619600 11137000 26190000 22447000 12422000 19104000 53322000 38167 1440 34038 318222;318223;318224;318225;318226;318227;318228;318229;318230;318231 251917;251918;251919;251920;251921;251922;251923 251918 7 NNIPYFETSAK Unmodified 1282.6194 0.61936665 1647 P51149 RAB7A Ras-related protein Rab-7a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 60.95 59.612 2 0.00025931 68716 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 91.584 68.803 2080700000 11155000 628910000 4702700 95643000 78270000 76002000 113640000 116180000 75777000 126530000 204920000 168030000 121640000 108870000 150390000 38168 1647 34039 318232;318233;318234;318235;318236;318237;318238;318239;318240;318241;318242;318243;318244;318245;318246;318247 251924;251925;251926;251927;251928;251929;251930;251931;251932;251933;251934;251935;251936;251937;251938;251939;251940 251940 17 NNISNFFAK Unmodified 1053.5243 0.52434406 4301 Q9GZR1 SENP6 Sentrin-specific protease 6 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 65.301 65.455 2 0.024299 74976 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 50.703 29.24 28617000 0 0 0 0 2295100 2597100 2688400 1517200 2644800 3958900 3516400 5704000 0 0 3695200 38169 4301 34040 318248;318249;318250;318251;318252;318253;318254;318255;318256 251941 251941 1 NNITAQGFQDIAVAMEK Oxidation (M) 1864.8989 0.89891233 2833 Q5VZK9 LRRC16A Leucine-rich repeat-containing protein 16A yes yes 0 1 0 By MS/MS 2 0 1 1 79.298 74.562 2 4.5515E-81 92880 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 193 171.97 57647000 0 57647000 0 0 0 0 0 0 0 0 0 0 0 0 0 38170 2833 34041 318257 251942;251943;251944 251943 4495 3 NNITAQGFQDIAVAMEK Unmodified 1848.904 0.90399771 2833 Q5VZK9 LRRC16A Leucine-rich repeat-containing protein 16A yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 89.774 86.252 2 2.4239E-46 107236 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 167.73 153.93 64172000 0 60557000 3615100 0 0 0 0 0 0 0 0 0 0 0 0 38171 2833 34041 318258;318259;318260 251945;251946;251947 251945 3 NNLAGAEELFAR Unmodified 1303.6521 0.65206377 2040 Q00610 CLTC Clathrin heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 74.818 74.976 2 0.010467 85457 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 56.359 42.59 242710000 0 0 0 0 0 38957000 13775000 0 13725000 43363000 38675000 0 0 26876000 67335000 38172 2040 34042 318261;318262;318263;318264;318265;318266;318267 251948;251949;251950;251951;251952;251953 251953 6 NNLAGAEELFARK Unmodified 1431.747 0.74702678 2040 Q00610 CLTC Clathrin heavy chain 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.589 66.673 3 9.3029E-09 76266 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 107.17 93.486 655170000 0 0 0 19575000 16108000 67010000 31058000 43051000 24235000 46840000 55799000 80221000 54067000 60478000 156730000 38173 2040 34043 318268;318269;318270;318271;318272;318273;318274;318275;318276;318277;318278;318279 251954;251955;251956;251957;251958;251959;251960;251961;251962;251963;251964;251965;251966;251967;251968;251969 251956 16 NNLASCYLK Unmodified 1081.5226 0.5226295 4321;2143;4629 Q9H0B6;Q9NSK0;Q07866 KLC2;KLC4;KLC1 Kinesin light chain 2;Kinesin light chain 4;Kinesin light chain 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49.592 48.53 2 0.0010762 62874 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.28 106.12 385360000 15429000 101150000 1877100 14592000 18172000 19481000 15982000 15400000 18445000 17178000 23877000 32501000 33829000 24949000 32501000 38174 4321;4629;2143 34044 318280;318281;318282;318283;318284;318285;318286;318287;318288;318289;318290;318291;318292;318293;318294 251970;251971;251972;251973;251974;251975;251976;251977;251978;251979;251980;251981;251982;251983 251974 13 NNLEIDLNYK Unmodified 1234.6194 0.61936665 2296 Q13464 ROCK1 Rho-associated protein kinase 1 yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 74.042 69.287 2 0.015361 86603 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.666 64.966 81196000 312820 80884000 0 0 0 0 0 0 0 0 0 0 0 0 0 38175 2296 34045 318295;318296 251984 251984 1 NNLEILNEK Unmodified 1085.5717 0.57168818 249 O15078 CEP290 Centrosomal protein of 290 kDa yes yes 0 0 0 By MS/MS 2 0 1 1 57.346 51.525 2 0.041628 66503 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.455 53.493 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38176 249 34046 318297 251985 251985 1 NNLGTPLQK Unmodified 983.53999 0.53999412 4968 Q9UKJ3 GPATCH8 G patch domain-containing protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.117 30.308 2 0.0062061 33216 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 75.692 51.489 172420000 0 0 0 8482000 12768000 12264000 14439000 11134000 14737000 16036000 14435000 20333000 17298000 15450000 15042000 38177 4968 34047 318298;318299;318300;318301;318302;318303;318304;318305;318306;318307;318308;318309 251986;251987;251988;251989;251990;251991;251992;251993 251992 7 NNLIQQK Unmodified 856.47667 0.47666558 2832;4594;4646 Q5VZF2;Q9NR56;Q9NUK0 MBNL2;MBNL1;MBNL3 Muscleblind-like protein 2;Muscleblind-like protein 1;Muscleblind-like protein 3 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 2 1 2 2 2 2 1 1 1 16.245 16.383 2 0.018568 16394 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 111.69 69.459 523480000 0 0 0 40243000 36132000 61680000 0 65542000 69448000 66647000 52184000 95226000 0 0 36377000 38178 2832;4594;4646 34048 318310;318311;318312;318313;318314;318315;318316;318317;318318;318319;318320;318321;318322;318323 251994;251995;251996;251997;251998;251999;252000;252001 252001 7 NNLLTNK Unmodified 815.45012 0.45011648 5118 Q9Y2T3 GDA Guanine deaminase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 20.14 19.712 2 0.019091 25326 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 133.47 9.4803 808500000 0 696070000 14597000 8400000 0 0 0 5077800 0 6868300 16138000 15185000 6824100 13673000 25664000 38179 5118 34049 318324;318325;318326;318327;318328;318329;318330;318331;318332;318333 252002;252003;252004 252002 2 NNLNPTWK Unmodified 985.49813 0.49812931 4064 Q99829 CPNE1 Copine-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 5.4 3.77 2 1 2 1 2 1 1 40.918 36.947 2 0.01524 40561 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 69.198 37.084 447110000 104210000 335480000 0 0 0 0 0 0 0 0 0 7418300 0 0 0 38180 4064 34050 318334;318335;318336;318337;318338 252005;252006;252007;252008 252008 3 NNLNPVWRPFK Unmodified 1383.7412 0.74115354 458 O75131 CPNE3 Copine-3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 68.461 68.561 3 0.049154 77772 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 27.644 20.605 37216000 0 0 0 3458400 0 7039500 0 3221200 3535900 3151000 0 4690700 2621900 0 9497700 38181 458 34051 318339;318340;318341;318342;318343;318344;318345;318346 252009 252009 1 NNLPSNDSSK Unmodified 1074.4942 0.49416614 1053 P17480 UBTF Nucleolar transcription factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 8.0411 8.1719 2 0.00046371 5955 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 135.79 125.8 144770000 0 0 0 11263000 11174000 13887000 9356600 10677000 10477000 8035000 21432000 19391000 10754000 7428400 10898000 38182 1053 34052 318347;318348;318349;318350;318351;318352;318353;318354;318355;318356;318357;318358 252010;252011;252012;252013;252014;252015;252016;252017;252018;252019;252020;252021;252022;252023;252024 252017 14 NNLSFIETSALDSTNVEEAFK Unmodified 2328.1121 0.11213581 2593 Q15907 RAB11B Ras-related protein Rab-11B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.25 2.59 5 2 1 1 4 2 1 94.143 90.492 2;3 3.812E-287 112614 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 317.26 310.22 492770000 9021600 465080000 17018000 0 0 0 0 0 0 1646500 0 0 0 0 0 38183 2593 34053 318359;318360;318361;318362;318363;318364;318365;318366 252025;252026;252027;252028;252029;252030;252031;252032;252033;252034;252035 252026 11 NNLSLGDALAK Unmodified 1114.5982 0.59823728 3736 Q96AD5 PNPLA2 Patatin-like phospholipase domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 59.408 59.662 2 0.012021 68046 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 47.96 17.705 42322000 0 0 0 0 0 0 0 9787700 0 0 17865000 0 14669000 0 0 38184 3736 34054 318367;318368;318369 252036;252037;252038 252037 3 NNLVDIIQQNK Unmodified 1297.699 0.69901396 1747 P54750 PDE1A Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 5.4 3.77 2 1 2 2 1 1 1 75.25 71.468 2 0.0014897 85960 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 88.37 61.041 68594000 0 66231000 2362800 0 0 0 0 0 0 0 0 0 0 0 0 38185 1747 34055 318370;318371;318372;318373;318374 252039;252040;252041;252042 252041 3 NNLVIDTPR Unmodified 1040.5615 0.56145784 4814;4517 Q9P2D1;Q9HCK8 CHD7;CHD8 Chromodomain-helicase-DNA-binding protein 7;Chromodomain-helicase-DNA-binding protein 8 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 46.845 47.007 2 0.014345 53707 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 58.433 21.673 105520000 0 0 0 17426000 0 0 0 0 0 27308000 0 0 30316000 0 30471000 38186 4814;4517 34056 318375;318376;318377;318378;318379 252043;252044;252045;252046;252047 252047 5 NNNAGSFDSEGVASR Unmodified 1523.6601 0.66006227 457 O75128 COBL Protein cordon-bleu yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.264 31.454 2 3.1473E-10 33819 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 121.02 114.17 64199000 0 0 0 3610100 3349300 4356200 6245700 5464600 3618600 4610700 4701900 10587000 4686800 4816300 8151900 38187 457 34057 318380;318381;318382;318383;318384;318385;318386;318387;318388;318389;318390;318391 252048;252049;252050;252051;252052;252053;252054;252055;252056;252057;252058;252059;252060;252061;252062;252063 252060 16 NNNAGSFDSEGVASRR Unmodified 1679.7612 0.7611733 457 O75128 COBL Protein cordon-bleu yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.009 27.206 3 0.00041496 29244 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 42.947 31.178 89598000 0 0 0 5265800 5076000 5234900 8379800 6403900 7876700 9058600 9086200 9357600 6304500 6212400 11342000 38188 457 34058 318392;318393;318394;318395;318396;318397;318398;318399;318400;318401;318402;318403 252064;252065;252066;252067;252068;252069;252070;252071;252072;252073;252074 252073 10 NNNIDAAIENIENMLTSENK Unmodified 2246.0485 0.048489695 1464 P42704 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 99.084 92.632 3 2.187E-06 119235 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.636 58.833 40487000 8587800 31899000 0 0 0 0 0 0 0 0 0 0 0 0 0 38189 1464 34059 318404;318405 252075 252075 1 NNNLAVTSK Unmodified 959.50361 0.50360861 1122 P21283 ATP6V1C1 V-type proton ATPase subunit C 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 18.061 14.161 2 0.023396 20590 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.23 52.594 72011000 7482000 64529000 0 0 0 0 0 0 0 0 0 0 0 0 0 38190 1122 34060 318406;318407 252076;252077;252078 252078 3 NNNPLYSR Unmodified 976.47264 0.47264284 2885 Q6IBW4 NCAPH2 Condensin-2 complex subunit H2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 25.242 25.454 2 0.020339 26371 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 62.88 35.394 44740000 0 0 0 0 0 5712600 5865500 6898400 4003500 7336900 0 8461300 0 6462200 0 38191 2885 34061 318408;318409;318410;318411;318412;318413;318414 252079;252080;252081 252081 3 NNNQQLAQLQK Unmodified 1297.6739 0.67386184 5094 Q9Y2A7 NCKAP1 Nck-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.081 30.273 2 1.942E-05 32959 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 126.52 116 106670000 0 0 0 7002500 5496300 9997000 9047700 7262800 5018900 8829300 9504600 5967100 8798900 11501000 18243000 38192 5094 34062 318415;318416;318417;318418;318419;318420;318421;318422;318423;318424;318425;318426 252082;252083;252084;252085;252086;252087;252088;252089;252090;252091;252092 252091 11 NNNSNQNFFK Unmodified 1225.5476 0.54759869 430 O60763 USO1 General vesicular transport factor p115 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 34.256 33.171 2 2.5387E-05 42777 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.58 98.982 367870000 16903000 164780000 1906100 13061000 8922300 13094000 15764000 16909000 9352800 17655000 21223000 14445000 14312000 11675000 27870000 38193 430 34063 318427;318428;318429;318430;318431;318432;318433;318434;318435;318436;318437;318438;318439;318440;318441;318442 252093;252094;252095;252096;252097;252098;252099;252100;252101;252102;252103;252104;252105 252095 10 NNNSQQDIDSENMK Unmodified 1635.6795 0.67947708 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 20.02 20.248 2 0.00050602 19738 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.536 62.812 24105000 0 0 0 1807900 1194100 1332600 0 1154600 0 2215600 3435900 4056100 2410000 2072400 4425800 38194 3443 34064 318443;318444;318445;318446;318447;318448;318449;318450;318451;318452 252106 252106 1 NNNYRISK Unmodified 1007.5148 0.514842 1540 P48506 GCLC Glutamate--cysteine ligase catalytic subunit yes yes 0 0 1 By MS/MS 2 0 1 1 13.917 9.922 2 0.0028764 15037 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 158.56 123.75 46894000 46894000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38195 1540 34065 318453 252107 252107 1 NNPATPSTAMGSSVPYSTAK Oxidation (M) 1995.9208 0.92076999 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.654 41.833 2 3.3248E-60 45803 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 131.35 105.34 99636000 0 0 0 6636700 6127900 6403700 7183000 8641300 7821100 9079600 10118000 10933000 11945000 7046200 7701400 38196 1364 34066 318454;318455;318456;318457;318458;318459;318460;318461;318462;318463;318464;318465 252108;252109;252110;252111;252112;252113;252114;252115;252116;252117;252118;252119 252111 2118 12 NNPATPSTAMGSSVPYSTAK Unmodified 1979.9259 0.92585536 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 54.396 54.527 2 3.3528E-58 61751 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 162.37 141.07 152700000 0 0 0 6737400 9087100 9031600 11137000 13348000 11097000 13675000 11017000 18562000 13309000 13949000 21746000 38197 1364 34066 318466;318467;318468;318469;318470;318471;318472;318473;318474;318475;318476;318477 252120;252121;252122;252123;252124;252125;252126;252127;252128;252129;252130;252131;252132 252130 12 NNPIYQFHIEK Unmodified 1401.7041 0.70409934 5295 Q9Y6W3 CAPN7 Calpain-7 yes yes 0 0 0 By MS/MS By matching 2 0 3 2 1 73.057 67.205 2;3 0.004233 88696 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.473 41.842 37932000 35167000 0 2765200 0 0 0 0 0 0 0 0 0 0 0 0 38198 5295 34067 318478;318479;318480 252133;252134 252133 2 NNPPTLEGNYSK Unmodified 1332.631 0.63099397 5279 Q9Y6E0 STK24 Serine/threonine-protein kinase 24;Serine/threonine-protein kinase 24 36 kDa subunit;Serine/threonine-protein kinase 24 12 kDa subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 37.18 32.265 2 0.00051372 42313 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.597 76.65 27676000 0 27676000 0 0 0 0 0 0 0 0 0 0 0 0 0 38199 5279 34068 318481;318482;318483;318484 252135;252136;252137;252138 252136 3 NNPPTLVGDFTK Unmodified 1301.6616 0.66156582 4811 Q9P289 STK26 Serine/threonine-protein kinase 26 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 68.665 66.806 2 5.6712E-08 76830 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 120.09 107.13 3088200000 38064000 2647000000 24815000 26486000 28392000 78140000 39574000 44813000 28894000 76561000 0 0 55445000 0 0 38200 4811 34069 318485;318486;318487;318488;318489;318490;318491;318492;318493;318494;318495;318496;318497 252139;252140;252141;252142;252143;252144;252145;252146;252147;252148;252149;252150;252151;252152;252153 252139 12 NNPVHLITEEDLK Unmodified 1520.7835 0.78347187 596 O94874 UFL1 E3 UFM1-protein ligase 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 70.863 66.25 3 0.0037407 80558 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 51.726 41.4 14187000 0 11253000 2934500 0 0 0 0 0 0 0 0 0 0 0 0 38201 596 34070 318498;318499 252154;252155 252155 2 NNQETMIK Unmodified 976.46478 0.46478027 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 16.611 16.818 2 0.0075833 16703 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 89.142 51.497 43844000 0 0 0 0 3043900 3904500 3055900 2796100 2734300 3901300 5252300 4531000 5487900 4589700 4547600 38202 2804 34071 318500;318501;318502;318503;318504;318505;318506;318507;318508;318509;318510 252156;252157;252158;252159;252160;252161;252162 252159 7 NNQETMIK Oxidation (M) 992.45969 0.45969489 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 1 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 7.2849 7.3685 2 0.011022 5762 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 66.799 40.905 25057000 0 0 0 2275500 1430600 2139800 1769700 1501500 2040800 2195400 0 3509700 4131200 4062500 0 38203 2804 34071 318511;318512;318513;318514;318515;318516;318517;318518;318519;318520 252163;252164;252165 252165 4435 3 NNQFQALLQYADPVSAQHAK Unmodified 2242.1131 0.11307928 1208 P26599 PTBP1 Polypyrimidine tract-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.74 3.84 6 2 11 2 5 1 1 1 1 1 1 1 1 1 1 1 1 88.362 86.836 3 2.0642E-102 109489 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 173.37 170.03 784920000 497640000 33570000 11397000 1590600 0 8141500 3057800 11939000 11323000 35081000 11944000 7887100 4309800 11968000 135070000 38204 1208 34072 318521;318522;318523;318524;318525;318526;318527;318528;318529;318530;318531;318532;318533;318534;318535;318536;318537;318538;318539 252166;252167;252168;252169;252170;252171;252172;252173;252174;252175;252176;252177;252178;252179;252180;252181;252182;252183;252184;252185;252186;252187;252188;252189 252177 23 NNQFQALLQYGDPVNAQQAK Unmodified 2246.108 0.10799391 4960 Q9UKA9 PTBP2 Polypyrimidine tract-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.12 3.89 3 1 4 3 1 1 1 1 1 86.35 84.49 2;3 5.8087E-199 104800 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 305.6 292.73 193880000 0 158590000 905620 0 0 8111300 0 5640300 0 9224400 0 0 0 0 11401000 38205 4960 34073 318540;318541;318542;318543;318544;318545;318546;318547 252190;252191;252192;252193;252194;252195;252196;252197;252198 252192 8 NNQGQLIAEPFYHLPSK Unmodified 1954.9901 0.9901106 3143 Q86U86 PBRM1 Protein polybromo-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 77.528 77.627 3 0.0024587 89443 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 42.708 32.785 148450000 0 0 0 0 6632600 18197000 7770600 10546000 0 18496000 12817000 10001000 15055000 15095000 33838000 38206 3143 34074 318548;318549;318550;318551;318552;318553;318554;318555;318556;318557 252199;252200;252201 252201 3 NNQGTVNWSVDDIVK Unmodified 1687.8166 0.81656291 1682 P52292 KPNA2 Importin subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.051 78.11 2 2.5959E-49 90228 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 167.3 150.67 247920000 0 0 0 9775900 12635000 21114000 11783000 14633000 11893000 27581000 24212000 28956000 19036000 23763000 42542000 38207 1682 34075 318558;318559;318560;318561;318562;318563;318564;318565;318566;318567;318568;318569 252202;252203;252204;252205;252206;252207;252208;252209;252210;252211;252212;252213;252214 252208 13 NNQIEQFSVK Unmodified 1205.6041 0.60405094 3341 Q8N584 TTC39C Tetratricopeptide repeat protein 39C yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 49.116 48.409 2 0.00012499 61912 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 141.52 110.45 446310000 0 336540000 0 0 0 25235000 0 0 10551000 24858000 18122000 0 0 0 30998000 38208 3341 34076 318570;318571;318572;318573;318574;318575 252215;252216;252217;252218 252217 4 NNQITNNQR Unmodified 1100.5323 0.53228298 733 P00558 PGK1 Phosphoglycerate kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 6.7308 6.1557 2 5.6246E-16 7416 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 194.25 166.03 1796500000 147420000 1543800000 0 3200200 2183000 3616300 4330600 3660400 2836200 1528000 15951000 10032000 1452400 11834000 44626000 38209 733 34077 318576;318577;318578;318579;318580;318581;318582;318583;318584;318585;318586;318587;318588;318589;318590 252219;252220;252221;252222;252223;252224;252225;252226;252227;252228;252229;252230;252231 252225 11 NNQITNNQRIK Unmodified 1341.7113 0.71130998 733 P00558 PGK1 Phosphoglycerate kinase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 9 3 5 5 2 17.73 13.998 2;3 3.6088E-22 18064 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 190.02 167.28 8694500000 6067900000 621990000 2004600000 0 0 0 0 0 0 0 0 0 0 0 0 38210 733 34078 318591;318592;318593;318594;318595;318596;318597;318598;318599;318600;318601;318602 252232;252233;252234;252235;252236;252237;252238;252239;252240;252241;252242;252243;252244;252245;252246;252247;252248 252233 13 NNQLAFDIAEK Unmodified 1261.6303 0.63026569 3065 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 66.019 66.173 2 0.002544 75840 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 67.207 47.42 47397000 0 0 0 0 3736000 3777100 3205700 2921400 4452400 5450700 5393300 6585000 0 4838200 7037200 38211 3065 34079 318603;318604;318605;318606;318607;318608;318609;318610;318611;318612;318613 252249;252250;252251;252252;252253;252254;252255;252256;252257;252258;252259 252254 11 NNQQVPENTEELGQTK Unmodified 1827.8599 0.85988429 4726 Q9NXG2 THUMPD1 THUMP domain-containing protein 1 yes yes 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 36.988 37.379 2 1.0277E-10 40301 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 120.96 114.86 27030000 0 0 0 0 0 2991500 0 0 1954400 0 4747600 3835700 3224700 3683900 6592300 38212 4726 34080 318614;318615;318616;318617;318618;318619;318620 252260 252260 1 NNQQVPENTEELGQTKPTSNPQVVNEGGAKPELASQATEGSK Unmodified 4405.127 0.12695761 4726 Q9NXG2 THUMPD1 THUMP domain-containing protein 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 60.438 58.543 4 4.9113E-46 67190 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 63.97 60.626 36010000 9518800 0 0 0 0 0 0 5538600 0 9442500 11510000 0 0 0 0 38213 4726 34081 318621;318622;318623;318624 252261;252262;252263 252263 3 NNQTELETSNNRENNTVSNIHPK Unmodified 2652.2488 0.2487975 674 O95625 ZBTB11 Zinc finger and BTB domain-containing protein 11 yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 33.605 33.839 4 0.045451 36478 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 18.919 15.856 73652000 0 0 0 0 4425800 5672100 0 3574700 3216100 9274900 0 7980500 15886000 7486100 16136000 38214 674 34082 318625;318626;318627;318628;318629;318630;318631;318632;318633 252264 252264 1 NNRDLDFTIDLDFK Unmodified 1724.837 0.836964 4069 Q99873 PRMT1 Protein arginine N-methyltransferase 1 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 6 3 7 2 91.411 85.443 2;3 0.00039339 108771 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 92.457 80.434 309000000 282030000 26968000 0 0 0 0 0 0 0 0 0 0 0 0 0 38215 4069 34083 318634;318635;318636;318637;318638;318639;318640;318641;318642 252265;252266;252267;252268;252269;252270;252271;252272;252273;252274;252275;252276;252277;252278;252279;252280 252274 14 NNRFSTPEQAAK Unmodified 1361.6688 0.66877646 1008 P14866 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.6 1.74 1 19 1 1 1 1 2 2 1 1 2 2 2 2 2 20.561 20.54 2;3 1.881E-05 21122 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 74.698 64.51 474160000 29329000 0 0 25933000 15238000 17827000 48930000 26521000 33114000 18461000 57298000 55504000 40481000 53433000 52087000 38216 1008 34084 318643;318644;318645;318646;318647;318648;318649;318650;318651;318652;318653;318654;318655;318656;318657;318658;318659;318660;318661;318662 252281;252282;252283;252284;252285;252286;252287;252288;252289;252290;252291;252292;252293;252294;252295;252296;252297;252298;252299 252294 16 NNRFTSAGQASK Unmodified 1279.6269 0.62691165 3567 Q8WVV9 HNRNPLL Heterogeneous nuclear ribonucleoprotein L-like yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 9.727 9.9269 3 0.0041157 8353 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 52.071 33.399 56632000 0 0 0 0 3021000 0 0 4250200 5373600 0 15063000 7799400 5802800 8536100 6786100 38217 3567 34085 318663;318664;318665;318666;318667;318668;318669;318670 252300;252301 252301 2 NNRILDELVK Unmodified 1212.6826 0.68263561 4622 Q9NS91 RAD18 E3 ubiquitin-protein ligase RAD18 yes yes 0 0 1 By MS/MS 2 0 1 1 76.988 68.858 3 0.011525 90734 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.977 31.345 19977000 19977000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38218 4622 34086 318671 252302 252302 1 NNRPAFFSPSLK Unmodified 1376.7201 0.72008375 2887 Q6ICG6 KIAA0930 Uncharacterized protein KIAA0930 yes yes 0 0 1 By matching By MS/MS By matching 10 0 3 1 1 1 60.352 60.31 3 0.029706 68478 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 33.968 19.71 8951300 0 0 0 2664600 0 0 0 0 0 0 3785600 0 0 2501200 0 38219 2887 34087 318672;318673;318674 252303 252303 1 NNRPSEGPLQTR Unmodified 1367.6906 0.69057454 2040 Q00610 CLTC Clathrin heavy chain 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.58 1.79 1 18 1 1 1 1 1 2 1 2 2 2 1 2 2 18.945 18.929 2;3 5.5157E-17 17988 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 143.42 113.62 985550000 7475300 0 0 46685000 40162000 83637000 48738000 59183000 38524000 97085000 93250000 120460000 67207000 80821000 202320000 38220 2040 34088 318675;318676;318677;318678;318679;318680;318681;318682;318683;318684;318685;318686;318687;318688;318689;318690;318691;318692;318693 252304;252305;252306;252307;252308;252309;252310;252311;252312;252313;252314;252315;252316;252317;252318 252307 8 NNRQPYAVSELAGHQTSAESWGTGR Unmodified 2715.275 0.27495267 1377 P36578 RPL4 60S ribosomal protein L4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 60.749 61.175 4 2.8167E-86 68942 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 127.3 121.33 46788000 0 0 0 0 0 0 0 0 0 0 0 15053000 0 9220700 22515000 38221 1377 34089 318694;318695;318696 252319;252320;252321 252319 3 NNRYPNLQLR Unmodified 1286.6844 0.68436695 2425 Q14671 PUM1 Pumilio homolog 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 45.379 45.611 3 0.0010444 51122 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 69.915 61.428 241700000 0 0 0 14310000 0 24438000 15680000 21238000 13191000 21904000 19189000 36923000 22324000 18274000 34234000 38222 2425 34090 318697;318698;318699;318700;318701;318702;318703;318704;318705;318706;318707 252322;252323;252324;252325;252326;252327;252328;252329;252330;252331;252332;252333;252334 252329 13 NNSELLNNLGNFINR Unmodified 1730.87 0.86999547 1779 P56192 MARS Methionine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 87.516 87.644 2 0.00019722 101358 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.108 73.855 8426000 0 0 0 0 0 0 0 0 0 2189300 0 0 0 0 6236700 38223 1779 34091 318708;318709 252335;252336 252336 2 NNSFTAPSTVGK Unmodified 1221.599 0.59896556 662 O95453 PARN Poly(A)-specific ribonuclease PARN yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 36.745 36.754 2 0.0013261 39435 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 99.973 80.196 20777000 0 0 0 0 2740400 5449300 4674200 0 3663500 0 0 0 0 4250000 0 38224 662 34092 318710;318711;318712;318713;318714;318715;318716 252337;252338;252339;252340 252337 4 NNSFVNEIISR Unmodified 1291.6521 0.65206377 1474 P43246 MSH2 DNA mismatch repair protein Msh2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.484 75.543 2 2.5976E-15 87059 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 160.36 117.76 310290000 0 0 0 12240000 15624000 30251000 16857000 21970000 23163000 31525000 30222000 31872000 19945000 23725000 52900000 38225 1474 34093 318717;318718;318719;318720;318721;318722;318723;318724;318725;318726;318727;318728 252341;252342;252343;252344;252345;252346;252347;252348;252349;252350;252351;252352;252353;252354 252352 13 NNSGEEFDCAFR Unmodified 1444.5677 0.56774179 2168 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 52.329 52.486 2 0.0014569 58267 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.726 63.68 59090000 0 0 0 4849800 2183200 0 0 0 3058900 4200200 6889400 10428000 6203300 7287000 13989000 38226 2168 34094 318729;318730;318731;318732;318733;318734;318735;318736;318737 252355;252356;252357;252358;252359;252360;252361 252356 7 NNSGLSFEELYR Unmodified 1427.6681 0.66810776 2330 Q13618 CUL3 Cullin-3 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 76.424 76.558 2 0.024804 87853 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.6 44.674 24061000 0 0 0 0 0 4061600 0 0 0 2748600 3645000 0 2431100 2370100 8804100 38227 2330 34095 318738;318739;318740;318741;318742;318743 252362;252363;252364 252363 3 NNSNDIVNAIMELTM 2 Oxidation (M) 1709.76 0.76003559 112 Q13765;E9PAV3 NACA Nascent polypeptide-associated complex subunit alpha;Nascent polypeptide-associated complex subunit alpha, muscle-specific form yes no 0 2 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 5.33 3.97 1 5 1 5 2 4 1 1 1 1 1 1 98.464 97.036 2 5.3846E-50 115609 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 164.64 150.22 532850000 32851000 437500000 10056000 0 0 1551000 0 0 0 20718000 0 9056900 0 0 21120000 38228 112 34096 318744;318745;318746;318747;318748;318749;318750;318751;318752;318753;318754;318755 252365;252366;252367;252368;252369;252370;252371;252372;252373;252374;252375;252376;252377 252366 145;146 12 NNSNDIVNAIMELTM Oxidation (M) 1693.7651 0.76512097 112 Q13765;E9PAV3 NACA Nascent polypeptide-associated complex subunit alpha;Nascent polypeptide-associated complex subunit alpha, muscle-specific form yes no 0 1 0 By MS/MS By MS/MS 2.29 0.452 5 2 5 2 99.815 96.14 2 5.2964E-18 117504 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.76 122.51 1103200000 0 1082300000 20892000 0 0 0 0 0 0 0 0 0 0 0 0 38229 112 34096 318756;318757;318758;318759;318760;318761;318762 252378;252379;252380;252381;252382;252383 252380 145;146 5 NNSNDIVNAIMELTM Unmodified 1677.7702 0.77020634 112 Q13765;E9PAV3 NACA Nascent polypeptide-associated complex subunit alpha;Nascent polypeptide-associated complex subunit alpha, muscle-specific form yes no 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 3 1 101.93 97.229 2 9.6127E-50 121761 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 161.67 155.82 674820000 28126000 640850000 5850500 0 0 0 0 0 0 0 0 0 0 0 0 38230 112 34096 318763;318764;318765;318766;318767 252384;252385;252386;252387;252388;252389 252388 6 NNSPMAANQTPTLR Unmodified 1513.7307 0.73072479 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 42.587 42.806 2 2.7924E-13 48343 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 110.86 104.47 70678000 0 0 0 0 5098100 8336300 4292600 6411300 3922100 6416800 0 10235000 5503600 8748100 11714000 38231 5189 34097 318768;318769;318770;318771;318772;318773;318774;318775;318776;318777 252390;252391;252392;252393;252394;252395;252396;252397;252398;252399 252399 10 NNSPMAANQTPTLR Oxidation (M) 1529.7256 0.72563941 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 30.756 31.134 2 0.00024361 33511 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 74.76 52.528 17600000 0 0 0 0 0 0 5550100 0 0 0 0 12050000 0 0 0 38232 5189 34097 318778;318779 252400;252401 252401 6584 2 NNSPMAANQTPTLREK Oxidation (M) 1786.8632 0.86319553 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 29.219 24.807 3 0.0043226 34658 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.343 33.204 20475000 13571000 0 6904000 0 0 0 0 0 0 0 0 0 0 0 0 38233 5189 34098 318780;318781 252402 252402 6584 1 NNSPMAANQTPTLREK Unmodified 1770.8683 0.86828091 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 40.318 35.206 3 0.0051206 48297 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.216 41.326 45106000 41151000 0 3954900 0 0 0 0 0 0 0 0 0 0 0 0 38234 5189 34098 318782;318783 252403 252403 1 NNSVSGLSVK Unmodified 1003.5298 0.52982336 4902 Q9UHI6 DDX20 Probable ATP-dependent RNA helicase DDX20 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.002 30.194 2 0.042395 32835 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 39.305 16.285 124690000 0 0 0 7549400 7776600 8015700 10976000 5883500 7697000 13533000 11890000 12916000 11971000 12720000 13760000 38235 4902 34099 318784;318785;318786;318787;318788;318789;318790;318791;318792;318793;318794;318795 252404 252404 1 NNTALQSVSLR Unmodified 1201.6415 0.64149908 3693 Q92974 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.35 49.508 2 6.8102E-13 56234 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 142.36 96.389 871740000 0 0 0 34256000 41775000 58380000 60431000 68150000 58212000 78317000 108010000 132970000 62812000 76442000 91982000 38236 3693 34100 318796;318797;318798;318799;318800;318801;318802;318803;318804;318805;318806;318807 252405;252406;252407;252408;252409;252410 252405 5 NNTALQSVSLRSK Unmodified 1416.7685 0.76849051 3693 Q92974 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 0 0 1 By MS/MS 2 0 1 1 45.176 38.184 3 0.0075737 52549 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.704 37.877 14550000 14550000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38237 3693 34101 318808 252411 252411 1 NNTPECLAPVDLVVK Unmodified 1667.8553 0.8552566 3842 Q96FZ2 HMCES Embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.838 81.899 2 1.21E-05 94422 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.441 73.98 50094000 0 0 0 1551900 2290400 6023400 3569200 2982500 2894200 5444200 4976800 5668400 2315200 4667700 7710600 38238 3842 34102 318809;318810;318811;318812;318813;318814;318815;318816;318817;318818;318819;318820 252412;252413;252414;252415;252416;252417;252418;252419;252420;252421;252422;252423 252415 12 NNTQVLINCR Unmodified 1230.6139 0.61390412 1894 P62316 SNRPD2 Small nuclear ribonucleoprotein Sm D2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.177 37.356 2 1.7485E-23 41125 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 175.44 130.36 909620000 0 0 0 43365000 54288000 42609000 53846000 46765000 50477000 73899000 86827000 127830000 93724000 95141000 140850000 38239 1894 34103 318821;318822;318823;318824;318825;318826;318827;318828;318829;318830;318831;318832 252424;252425;252426;252427;252428;252429;252430;252431;252432;252433 252431 9 NNTQVLINCRNNK Unmodified 1586.7947 0.79472203 1894 P62316 SNRPD2 Small nuclear ribonucleoprotein Sm D2 yes yes 0 0 1 By MS/MS 2 0 1 1 31.148 25.429 3 0.0010018 35863 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.205 42.488 42989000 42989000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38240 1894 34104 318833 252434 252434 1 NNTVGLIQLNRPK Unmodified 1465.8365 0.83651049 1267 P30084 ECHS1 Enoyl-CoA hydratase, mitochondrial yes yes 0 0 1 By MS/MS 2 0 1 1 68.274 59.98 3 0.0023085 80184 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.7 47.661 15611000 15611000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38241 1267 34105 318834 252435;252436 252435 2 NNTVTPGGKPNK Unmodified 1225.6415 0.64149908 1070 P18077 RPL35A 60S ribosomal protein L35a yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.91 2.75 3 19 1 1 1 2 2 1 2 2 1 1 1 2 1 2 2 7.0423 6.7253 2;3 6.609E-05 8983 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 154.85 85.426 376240000 56993000 23518000 2391400 20687000 9507100 3550800 23953000 20309000 5167600 24627000 34610000 37974000 23035000 27536000 62374000 38242 1070 34106 318835;318836;318837;318838;318839;318840;318841;318842;318843;318844;318845;318846;318847;318848;318849;318850;318851;318852;318853;318854;318855;318856 252437;252438;252439;252440;252441;252442;252443;252444;252445;252446;252447;252448;252449;252450 252442 12 NNVGGLLGPAK Unmodified 1038.5822 0.58219329 679 O95677;Q99502 EYA4;EYA1 Eyes absent homolog 4;Eyes absent homolog 1 yes no 0 0 0 By MS/MS 2 0 1 1 52.578 46.805 2 0.017004 60758 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.812 46.288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38243 679 34107 318857 252451 252451 1 NNVLIVCVPNPPIDEK Unmodified 1819.9502 0.95021962 4978 Q9UKX7 NUP50 Nuclear pore complex protein Nup50 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 84.178 83.4 2 7.5558E-05 95900 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 79.82 62.453 45312000 0 27188000 0 0 2115700 2093900 0 0 0 4571800 5758000 0 3585300 0 0 38244 4978 34108 318858;318859;318860;318861;318862;318863;318864 252452;252453;252454;252455;252456;252457 252456 6 NNVNVASLTQSEIR Unmodified 1543.7954 0.79543354 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 0 By MS/MS 10 0 1 1 64.926 65.478 2 2.1323E-05 74250 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 112.13 87.664 7401100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7401100 38245 2930 34109 318865 252458 252458 0 NNVSSVSTTGTATDLESSAK Unmodified 1967.9284 0.92835778 2091 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes yes 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 46.802 46.852 2 0.040908 52406 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 34.179 25.666 18915000 0 0 0 1648400 1665700 2245400 3564000 0 1314900 0 3434000 5042500 0 0 0 38246 2091 34110 318866;318867;318868;318869;318870;318871;318872 252459 252459 1 NNVVINYK Unmodified 962.51853 0.5185304 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.239 36.42 2 0.035702 39588 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 95.793 73.301 382720000 0 0 0 20118000 23080000 25325000 32179000 24249000 25274000 30874000 30692000 49441000 33045000 34641000 53800000 38247 2930 34111 318873;318874;318875;318876;318877;318878;318879;318880;318881;318882;318883;318884 252460;252461 252461 0 NNWEVSALSR Unmodified 1174.5731 0.57308516 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60.648 59.537 2 0.00085029 67695 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 118.71 101.94 762960000 29665000 149470000 41997000 29520000 25828000 40995000 33723000 34726000 25790000 44674000 50446000 59001000 44757000 48987000 103380000 38248 1986 34112 318885;318886;318887;318888;318889;318890;318891;318892;318893;318894;318895;318896;318897;318898;318899 252462;252463;252464;252465;252466;252467;252468;252469;252470;252471;252472;252473;252474;252475 252462 13 NNWEVSALSRAAQK Unmodified 1572.8009 0.80085327 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 1 By MS/MS 2 0 2 2 70.433 62.148 2;3 5.5576E-31 83236 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 152.85 124.65 244790000 244790000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38249 1986 34113 318900;318901 252476;252477;252478 252478 3 NNYDEEIISLK Unmodified 1336.6511 0.65106071 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 69.564 69.743 2 0.004319 80251 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 61.765 32.291 41206000 0 0 0 0 0 3303700 5408500 9084400 0 4565800 10928000 7915500 0 0 0 38250 1029 34114 318902;318903;318904;318905;318906;318907 252479 252479 1 NNYEALNAQLLDELPK Unmodified 1843.9316 0.93159267 2993 Q6XZF7 DNMBP Dynamin-binding protein yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 87.83 88.007 2 0.0013092 101896 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.085 50.988 3829700 0 0 0 0 0 0 0 0 0 0 770980 0 0 0 3058800 38251 2993 34115 318908;318909 252480 252480 1 NNYENYIDIVK Unmodified 1383.667 0.66704513 2764 Q5SY16 NOL9 Polynucleotide 5'-hydroxyl-kinase NOL9 yes yes 0 0 0 By MS/MS 2 0 1 1 79.598 74.886 2 0.013112 93237 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.191 48.529 22320000 0 22320000 0 0 0 0 0 0 0 0 0 0 0 0 0 38252 2764 34116 318910 252481 252481 1 NNYHPVEDACWK Unmodified 1531.6514 0.65141184 1081 P18858 LIG1 DNA ligase 1 yes yes 0 0 0 By MS/MS 2 0 1 1 46.988 41.541 3 0.042461 54005 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 23.092 14.707 9001100 0 9001100 0 0 0 0 0 0 0 0 0 0 0 0 0 38253 1081 34117 318911 252482 252482 1 NNYHPVEDACWKPGQK Unmodified 1941.8792 0.87917994 1081 P18858 LIG1 DNA ligase 1 yes yes 0 0 1 By MS/MS By matching 2 0 2 1 1 47.245 40.664 3 0.021061 55934 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 34.485 32.099 70334000 42378000 27956000 0 0 0 0 0 0 0 0 0 0 0 0 0 38254 1081 34118 318912;318913 252483 252483 1 NNYSEDLELASLLIK Unmodified 1720.8883 0.88833087 1083 P19174 PLCG1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 yes yes 0 0 0 By MS/MS 2 0 1 1 98.74 94.005 2 1.4595E-30 116326 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.84 110.6 17613000 0 17613000 0 0 0 0 0 0 0 0 0 0 0 0 0 38255 1083 34119 318914 252484 252484 1 NNYVGLVNIPTASVTGR Unmodified 1773.9373 0.93734675 4938 Q9UJF2 RASAL2 Ras GTPase-activating protein nGAP yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 81.663 81.76 2 0.00098852 94975 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 63.537 55.432 31392000 0 0 0 0 1980700 3396400 2315300 2971600 0 0 3930300 4289500 2970800 2901000 6636100 38256 4938 34120 318915;318916;318917;318918;318919;318920;318921;318922;318923;318924 252485;252486;252487;252488;252489;252490;252491;252492;252493;252494;252495 252493 11 NPAAQQQLVQSCK Unmodified 1470.7249 0.72491113 5201 Q9Y4G6 TLN2 Talin-2 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 28.644 28.752 2 1.1152E-08 31101 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 121.9 111.07 8281300 0 0 0 0 812030 2392600 0 0 1134400 0 0 0 0 0 3942300 38257 5201 34121 318925;318926;318927;318928;318929;318930 252496;252497;252498;252499 252496 4 NPADLPK Unmodified 753.4021 0.40210366 980 P13639 EEF2 Elongation factor 2 yes yes 0 0 0 By MS/MS By MS/MS By matching 2 0 3 1 1 1 22.631 18.744 1 0.020732 26821 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 161.68 110.72 747670000 76880000 659310000 11477000 0 0 0 0 0 0 0 0 0 0 0 0 38258 980 34122 318931;318932;318933 252500 252500 1 NPAEPIAVQNNQQLALK Unmodified 1846.9901 0.9901106 4668 Q9NVH2 INTS7 Integrator complex subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.311 66.396 2 2.4254E-10 75222 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 115.57 109.6 74670000 0 0 0 3524500 4115200 5844600 5460900 5791900 3572100 5744900 8139900 6313900 6432500 8485000 11244000 38259 4668 34123 318934;318935;318936;318937;318938;318939;318940;318941;318942;318943;318944;318945 252501;252502;252503;252504;252505;252506;252507;252508;252509;252510;252511;252512;252513 252509 13 NPAERADLK Unmodified 1012.5302 0.53015772 1373;2079 P36507;Q02750 MAP2K2;MAP2K1 Dual specificity mitogen-activated protein kinase kinase 2;Dual specificity mitogen-activated protein kinase kinase 1 no no 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 14.305 11.275 2 0.0031462 14206 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 131.22 64.191 1024900000 0 531150000 493750000 0 0 0 0 0 0 0 0 0 0 0 0 38260 1373;2079 34124 318946;318947;318948 252514;252515;252516;252517 252516 3 NPAFEGVNRK Unmodified 1130.5833 0.58325592 2695 Q52LW3 ARHGAP29 Rho GTPase-activating protein 29 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 23.187 22.448 2 0.0084423 32955 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 111.39 81.207 28955000 12142000 0 0 0 0 0 0 2201600 0 0 0 7036100 3689900 0 3885300 38261 2695 34125 318949;318950;318951;318952;318953 252518;252519 252518 1 NPAGSVVMER Unmodified 1058.5179 0.51787847 181 O00764 PDXK Pyridoxal kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 31.094 31.591 2 0.0034159 33342 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.572 43.176 15399000 0 0 0 0 0 0 0 0 0 0 5450600 0 0 2830700 7117900 38262 181 34126 318954;318955;318956 252520;252521;252522 252520 3 NPAGSVVMER Oxidation (M) 1074.5128 0.51279309 181 O00764 PDXK Pyridoxal kinase yes yes 0 1 0 By MS/MS 10 0 1 1 21.285 21.923 2 0.047171 21860 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.034 10.781 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38263 181 34126 318957 252523 252523 1 NPAMMQEMMR 3 Oxidation (M) 1285.4923 0.4923337 4899;4609;5018 Q9NRR5;Q9UHD9;Q9UMX0 UBQLN4;UBQLN2;UBQLN1 Ubiquilin-4;Ubiquilin-2;Ubiquilin-1 no no 0 3 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.163 14.326 2 0.0017544 13891 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 83.998 77.103 68927000 0 0 0 4072700 4749100 2836700 4284000 3955400 3225900 6232300 6471900 8401000 10400000 6148100 8150400 38264 4609;4899;5018 34127 318958;318959;318960;318961;318962;318963;318964;318965;318966;318967;318968;318969 252524;252525;252526;252527;252528;252529;252530;252531;252532 252530 6009;6010;6011;6012 9 NPAMMQEMMR Unmodified 1237.5076 0.50758983 4899;4609;5018 Q9NRR5;Q9UHD9;Q9UMX0 UBQLN4;UBQLN2;UBQLN1 Ubiquilin-4;Ubiquilin-2;Ubiquilin-1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.39 58.505 2 0.00090505 65694 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 115.71 103.87 176080000 0 0 0 5646000 7393100 6234700 5703800 16704000 2653000 14190000 21091000 21740000 11559000 16463000 46698000 38265 4609;4899;5018 34127 318970;318971;318972;318973;318974;318975;318976;318977;318978;318979;318980;318981 252533;252534;252535;252536;252537;252538;252539;252540;252541;252542;252543;252544 252540 12 NPAMMQEMMR Oxidation (M) 1253.5025 0.50250446 4899;4609;5018 Q9NRR5;Q9UHD9;Q9UMX0 UBQLN4;UBQLN2;UBQLN1 Ubiquilin-4;Ubiquilin-2;Ubiquilin-1 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 35 1 4 4 4 2 3 4 3 3 2 5 39.851 40.08 2 0.0019404 48519 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 78.516 69.653 220220000 0 0 0 4239200 14931000 0 16006000 26893000 6143400 16944000 30623000 37135000 17725000 10989000 38592000 38266 4609;4899;5018 34127 318982;318983;318984;318985;318986;318987;318988;318989;318990;318991;318992;318993;318994;318995;318996;318997;318998;318999;319000;319001;319002;319003;319004;319005;319006;319007;319008;319009;319010;319011;319012;319013;319014;319015;319016 252545;252546;252547;252548;252549;252550;252551;252552;252553;252554;252555;252556;252557;252558;252559;252560;252561;252562;252563;252564;252565;252566 252561 6009;6010;6011;6012 22 NPAMMQEMMR 4 Oxidation (M) 1301.4872 0.48724832 4899;4609;5018 Q9NRR5;Q9UHD9;Q9UMX0 UBQLN4;UBQLN2;UBQLN1 Ubiquilin-4;Ubiquilin-2;Ubiquilin-1 no no 0 4 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.9602 7.0838 2 0.0059393 5281 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 78.113 72.631 129710000 0 0 0 5590100 6152700 5738500 10201000 8610300 8303400 13647000 16929000 11578000 18448000 12630000 11882000 38267 4609;4899;5018 34127 319017;319018;319019;319020;319021;319022;319023;319024;319025;319026;319027;319028 252567;252568;252569;252570;252571 252569 6009;6010;6011;6012 1 NPAMMQEMMR 2 Oxidation (M) 1269.4974 0.49741908 4899;4609;5018 Q9NRR5;Q9UHD9;Q9UMX0 UBQLN4;UBQLN2;UBQLN1 Ubiquilin-4;Ubiquilin-2;Ubiquilin-1 no no 0 2 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 15 1 2 1 1 4 1 1 3 1 25.603 25.888 2 0.0046098 27874 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.805 39.315 62140000 0 0 0 0 3569300 4230100 3550100 6354400 0 0 16830000 6537200 3268500 12032000 5768400 38268 4609;4899;5018 34127 319029;319030;319031;319032;319033;319034;319035;319036;319037;319038;319039;319040;319041;319042;319043 252572;252573;252574;252575;252576;252577;252578;252579 252573 6009;6010;6011;6012 5 NPAPPIDAVEQILPTLVR Unmodified 1942.0888 0.088762013 1682 P52292 KPNA2 Importin subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 6 2 2 2 98.067 98.221 2;3 1.413E-07 114017 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.494 75.652 21183000 0 0 0 0 0 0 0 0 0 9280000 3870300 0 0 0 8032700 38269 1682 34128 319044;319045;319046;319047;319048;319049 252580;252581;252582;252583;252584;252585 252583 6 NPASLPLTQAALK Unmodified 1322.7558 0.75580056 2289 Q13428 TCOF1 Treacle protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 72.826 71.779 2 4.5746E-05 82885 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 88.681 77.321 180480000 11459000 60902000 0 4613600 5891300 8779400 6009800 4677700 6423300 10482000 12425000 12958000 11015000 10018000 14825000 38270 2289 34129 319050;319051;319052;319053;319054;319055;319056;319057;319058;319059;319060;319061;319062;319063;319064 252586;252587;252588;252589;252590;252591;252592;252593;252594;252595;252596;252597;252598;252599 252597 14 NPATTNQTEFER Unmodified 1406.6426 0.64262129 1637 P50750 CDK9 Cyclin-dependent kinase 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.397 28.592 2 6.6205E-20 30408 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 175.65 165.69 115520000 0 0 0 6656100 6845600 8150700 6272800 5454000 4524300 13568000 15932000 11143000 13140000 11307000 12526000 38271 1637 34130 319065;319066;319067;319068;319069;319070;319071;319072;319073;319074;319075;319076 252600;252601;252602;252603;252604;252605;252606;252607;252608;252609;252610;252611 252609 12 NPATTNQTEFERVF Unmodified 1652.7794 0.77944912 1637 P50750 CDK9 Cyclin-dependent kinase 9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 73.297 73.408 2 4.4562E-60 83959 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 215.46 185.46 180220000 0 0 0 12989000 0 0 0 16898000 0 25777000 28704000 34923000 16723000 19219000 24983000 38272 1637 34131 319077;319078;319079;319080;319081;319082;319083;319084 252612;252613;252614;252615;252616;252617;252618;252619;252620 252612 8 NPAVLSAASFDGR Unmodified 1303.6521 0.65206377 614 O94979 SEC31A Protein transport protein Sec31A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 64.508 64.668 2 8.3696E-05 73843 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 100.72 99.462 105860000 0 0 0 0 5012200 4405600 5045400 8300000 3177900 10180000 9892100 16897000 12011000 9101100 21842000 38273 614 34132 319085;319086;319087;319088;319089;319090;319091;319092;319093;319094;319095 252621;252622;252623;252624;252625;252626;252627;252628;252629;252630;252631 252630 11 NPAVWLNTSQPLCK Unmodified 1626.8188 0.81881152 4832 Q9UBB5 MBD2 Methyl-CpG-binding domain protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 77.307 74.617 2 0.042809 90820 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 57.492 42.802 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38274 4832 34133 319096 252632 252632 1 NPDAYDYNK Unmodified 1098.4618 0.46180338 4457 Q9H8Y5 ANKZF1 Ankyrin repeat and zinc finger domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 20.815 19.721 2 0.017188 20063 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.898 39.744 22362000 0 12321000 0 0 0 0 3584000 0 0 0 0 0 0 0 6456900 38275 4457 34134 319097;319098;319099 252633;252634 252634 2 NPDDITNEEYGEFYK Unmodified 1832.7741 0.77408897 850 P07900 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.782 67.863 2 5.8648E-169 78402 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 222.54 222.54 1973300000 0 0 0 96492000 66304000 197470000 103970000 89938000 68508000 172640000 229800000 220750000 155830000 165100000 406520000 38276 850 34135 319100;319101;319102;319103;319104;319105;319106;319107;319108;319109;319110;319111 252635;252636;252637;252638;252639;252640;252641;252642;252643;252644;252645;252646;252647;252648;252649;252650;252651;252652;252653;252654;252655;252656;252657;252658 252656 24 NPDDITQEEYGEFYK Unmodified 1846.7897 0.78973904 862 P08238 HSP90AB1 Heat shock protein HSP 90-beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.71 1.48 1 27 1 2 2 2 2 3 2 2 2 3 2 3 2 69.497 69.377 2;3 1.3436E-169 79734 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 253.79 235.99 4536000000 0 26450000 0 140610000 231250000 509710000 220680000 222780000 151270000 370180000 526450000 470310000 286430000 367820000 1012100000 38277 862 34136 319112;319113;319114;319115;319116;319117;319118;319119;319120;319121;319122;319123;319124;319125;319126;319127;319128;319129;319130;319131;319132;319133;319134;319135;319136;319137;319138;319139 252659;252660;252661;252662;252663;252664;252665;252666;252667;252668;252669;252670;252671;252672;252673;252674;252675;252676;252677;252678;252679;252680;252681;252682;252683;252684;252685;252686;252687;252688;252689;252690;252691;252692;252693;252694;252695;252696;252697 252670 34 NPDDLQEANK Unmodified 1142.5204 0.52038089 4760 Q9NZ52 GGA3 ADP-ribosylation factor-binding protein GGA3 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching 10 0 6 1 1 1 1 1 1 15.149 15.31 2 0.018376 15147 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 48.423 36.067 28620000 0 0 0 0 0 3838500 3569500 0 2323500 5097200 0 6659600 7132100 0 0 38278 4760 34137 319140;319141;319142;319143;319144;319145 252698;252699 252698 2 NPDDPDTVDVIMHMLDR 2 Oxidation (M) 2013.8772 0.87719061 95 CON__Q5D862;Q5D862 FLG2 Filaggrin-2 yes no 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 22 3 2 2 2 2 2 3 3 2 1 74.428 74.452 3 4.1682E-05 87181 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 69.069 63.49 + 185360000 0 0 0 62560000 8971000 11064000 11984000 16409000 0 16204000 19227000 29421000 0 6338900 3185000 38279 95 34138 319146;319147;319148;319149;319150;319151;319152;319153;319154;319155;319156;319157;319158;319159;319160;319161;319162;319163;319164;319165;319166;319167 252700;252701;252702 252701 128;129 2 NPDEEDNTFYQR Unmodified 1526.6274 0.62736516 4124 Q9BS40 LXN Latexin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 36.828 36.286 2 3.5972E-35 39392 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 177.78 170.13 115300000 0 17282000 0 4338100 0 15038000 2977900 2437600 4411900 6967400 7992700 12432000 5300300 8241900 27882000 38280 4124 34139 319168;319169;319170;319171;319172;319173;319174;319175;319176;319177;319178;319179;319180;319181 252703;252704;252705;252706;252707;252708;252709;252710;252711;252712;252713;252714;252715 252707 13 NPDEEDNTFYQRLK Unmodified 1767.8064 0.80639216 4124 Q9BS40 LXN Latexin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 58.827 52.848 3 0.0023412 68300 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 61.732 55.569 64872000 17587000 30640000 16645000 0 0 0 0 0 0 0 0 0 0 0 0 38281 4124 34140 319182;319183;319184 252716;252717;252718 252716 3 NPDEVSYAGDNFVR Unmodified 1581.7059 0.70594983 652 O95391 SLU7 Pre-mRNA-splicing factor SLU7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.057 59.167 2 5.8279E-19 67324 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 156.51 149.38 80623000 0 0 0 4285100 4281100 5476100 4370800 5193000 3908100 6649500 8895900 8622600 8652600 9270800 11018000 38282 652 34141 319185;319186;319187;319188;319189;319190;319191;319192;319193;319194;319195;319196 252719;252720;252721;252722;252723;252724;252725;252726;252727;252728;252729;252730 252728 12 NPDGGFATYETK Unmodified 1298.5779 0.57789577 1539 P48449 LSS Lanosterol synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.933 40.112 2 0.00030191 45011 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 82.494 63.714 78978000 0 0 0 7230000 5384600 5807200 4820700 5317200 4074100 7832300 7476500 9774700 6875600 6573800 7811000 38283 1539 34142 319197;319198;319199;319200;319201;319202;319203;319204;319205;319206;319207;319208 252731;252732;252733;252734;252735;252736;252737;252738;252739 252739 9 NPDGSLSQAAMMQSALAK Unmodified 1818.8604 0.86041834 2414 Q14562 DHX8 ATP-dependent RNA helicase DHX8 yes yes 0 0 0 By MS/MS 2 0 1 1 78.754 74.019 2 5.4567E-55 92228 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 194.67 182.8 52844000 0 52844000 0 0 0 0 0 0 0 0 0 0 0 0 0 38284 2414 34143 319209 252740 252740 1 NPDGTMNLMNWECAIPGK 2 Oxidation (M) 2078.886 0.88598116 1952 P63279 UBE2I SUMO-conjugating enzyme UBC9 yes yes 0 2 0 By MS/MS 2.5 0.5 1 1 2 79.944 75.903 2 4.2109E-164 94053 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 236.4 220.46 99319000 0 99319000 0 0 0 0 0 0 0 0 0 0 0 0 0 38285 1952 34144 319210;319211 252741 252741 3137;3138 1 NPDGTMNLMNWECAIPGK Oxidation (M) 2062.8911 0.89106654 1952 P63279 UBE2I SUMO-conjugating enzyme UBC9 yes yes 0 1 0 By MS/MS 2.33 0.471 2 1 3 86.612 82.332 2 1.1977E-304 101840 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 268.93 248.2 388000000 0 388000000 0 0 0 0 0 0 0 0 0 0 0 0 0 38286 1952 34144 319212;319213;319214 252742;252743;252744 252742 3137;3138 3 NPDGTMNLMNWECAIPGK Unmodified 2046.8962 0.89615192 1952 P63279 UBE2I SUMO-conjugating enzyme UBC9 yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 92.053 87.99 2 1.2834E-87 109252 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 252.2 239.84 407640000 0 407640000 0 0 0 0 0 0 0 0 0 0 0 0 0 38287 1952 34144 319215;319216;319217 252745;252746;252747 252745 3 NPDMVAGEK Oxidation (M) 975.43315 0.43314579 1099 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 2 7.8754 8.0149 2 0.0063231 5831 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 66.27 39.308 27361000 0 0 0 0 0 3898700 4447700 3014500 3828500 5381800 0 0 0 0 6789700 38288 1099 34145 319218;319219;319220;319221;319222;319223;319224;319225 252748;252749;252750;252751;252752 252749 1575 5 NPDQRGDLLIEFEVSFPDTISSSSK Unmodified 2780.3505 0.3504686 4868 Q9UDY4 DNAJB4 DnaJ homolog subfamily B member 4 yes yes 0 0 1 By MS/MS 3 0 1 1 96.727 93.223 3 0.0001374 96429 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 49.638 34.694 5779900 5779900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38289 4868 34146 319226 252753 252753 1 NPDRVLIGGDETPEGQR Unmodified 1851.9075 0.90750318 425 O60701 UGDH UDP-glucose 6-dehydrogenase yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 43.732 44.474 3 1.5516E-18 48818 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.48 89.843 16491000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16491000 38290 425 34147 319227;319228 252754;252755 252754 2 NPDSITNQIALLEAR Unmodified 1653.8686 0.86859848 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.68 1.57 1 24 1 2 2 2 2 2 2 2 2 2 2 2 2 84.006 83.885 2;3 1.5734E-83 97169 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 225.33 204.49 387610000 0 52287000 0 2598000 14852000 31220000 17775000 21966000 34595000 41417000 36641000 39473000 15931000 24163000 54688000 38291 4634 34148 319229;319230;319231;319232;319233;319234;319235;319236;319237;319238;319239;319240;319241;319242;319243;319244;319245;319246;319247;319248;319249;319250;319251;319252;319253 252756;252757;252758;252759;252760;252761;252762;252763;252764;252765;252766;252767;252768;252769;252770;252771 252764 14 NPDSITNQIALLEARCHEMK Oxidation (M) 2355.1311 0.13111389 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 1 1 By MS/MS 2 0 1 1 82.617 74.487 4 0.00062046 97492 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.844 37.657 15900000 15900000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38292 4634 34149 319254 252772 252772 6037 1 NPDSQYGELIEK Unmodified 1391.6569 0.65687437 1268 P30085 CMPK1 UMP-CMP kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.94 3.58 1 3 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56.603 55.923 2 5.7757E-43 58023 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 178.53 132.53 2266700000 57471000 1938000000 3841000 13603000 8015200 12944000 12260000 12236000 12499000 17213000 37206000 25651000 10888000 22297000 82539000 38293 1268 34150 319255;319256;319257;319258;319259;319260;319261;319262;319263;319264;319265;319266;319267;319268;319269;319270 252773;252774;252775;252776;252777;252778;252779;252780;252781;252782;252783;252784;252785;252786;252787 252777 15 NPDTQWITK Unmodified 1101.5455 0.54547343 1845 P61313 RPL15 60S ribosomal protein L15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 45.696 46.036 2 0.022306 51627 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 51.528 28.485 71985000 0 0 0 0 0 7436800 0 6161700 4896300 8318300 9139800 11832000 0 9413700 14786000 38294 1845 34151 319271;319272;319273;319274;319275;319276;319277;319278 252788 252788 1 NPEDLSAETMAK Unmodified 1304.5918 0.59183127 5221 Q9Y570 PPME1 Protein phosphatase methylesterase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 41.473 41.237 2 7.2472E-15 44952 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 156.48 141.33 306580000 0 136430000 0 13121000 9917600 6793600 11029000 10626000 7951700 13842000 17666000 18306000 14341000 14042000 32508000 38295 5221 34152 319279;319280;319281;319282;319283;319284;319285;319286;319287;319288;319289;319290;319291 252789;252790;252791;252792;252793;252794;252795;252796;252797;252798;252799;252800;252801 252797 13 NPEDLSAETMAK Oxidation (M) 1320.5867 0.5867459 5221 Q9Y570 PPME1 Protein phosphatase methylesterase 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8 3.46 3 9 2 1 1 1 1 1 1 1 1 1 1 29.379 28.637 2 6.984E-05 31055 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 87.942 64.513 137910000 5144000 29834000 0 0 0 10496000 7917100 9321500 10389000 12125000 16057000 13957000 11353000 11316000 0 38296 5221 34152 319292;319293;319294;319295;319296;319297;319298;319299;319300;319301;319302;319303 252802;252803;252804;252805;252806;252807;252808 252808 6627 7 NPEEAELEDTLNQVMVVFK Oxidation (M) 2220.062 0.062014494 2328 Q13616 CUL1 Cullin-1 yes yes 0 1 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 97.468 93.948 3 3.8977E-06 112605 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 73.11 68.56 48781000 0 46441000 2340600 0 0 0 0 0 0 0 0 0 0 0 0 38297 2328 34153 319304;319305;319306 252809;252810;252811 252810 3795 3 NPEEAELEDTLNQVMVVFK Unmodified 2204.0671 0.067099872 2328 Q13616 CUL1 Cullin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 3 1 100.74 96.936 3 1.8554E-28 119689 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 112.16 103 57088000 0 56268000 819450 0 0 0 0 0 0 0 0 0 0 0 0 38298 2328 34153 319307;319308;319309;319310;319311 252812;252813;252814;252815 252814 4 NPEISFTQSSRK Unmodified 1392.6997 0.69974224 4254 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 yes yes 0 0 1 By MS/MS By matching By MS/MS 3.6 3.2 4 1 2 2 1 40.293 36.302 2;3 1.6165E-14 50174 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 150.1 135.43 88346000 72308000 0 11126000 0 0 0 0 0 0 0 0 0 0 0 4912200 38299 4254 34154 319312;319313;319314;319315;319316 252816;252817;252818 252817 2 NPEISHLLNNPDIMR Oxidation (M) 1777.8781 0.87811731 4899 Q9UHD9 UBQLN2 Ubiquilin-2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 2 2 1 69.339 69.268 2;3 0.0011252 79625 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 62.088 46.198 97293000 0 0 0 7893100 10283000 0 14305000 0 12646000 27251000 24915000 0 0 0 0 38300 4899 34155 319317;319318;319319;319320;319321;319322;319323;319324;319325;319326 252819;252820;252821;252822;252823 252820 6256 4 NPEISHMLNNPDIMR 2 Oxidation (M) 1811.8295 0.82945256 5018 Q9UMX0 UBQLN1 Ubiquilin-1 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 11 1 2 1 2 2 1 1 1 45.277 45.475 2;3 8.0307E-07 51637 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 83.633 77.729 200490000 0 0 0 29617000 37010000 0 6875100 0 0 0 51226000 61213000 5730700 3602700 5212400 38301 5018 34156 319327;319328;319329;319330;319331;319332;319333;319334;319335;319336;319337 252824;252825;252826;252827;252828;252829 252828 6358;6359 6 NPEISHMLNNPDIMR Unmodified 1779.8396 0.83962331 5018 Q9UMX0 UBQLN1 Ubiquilin-1 yes yes 0 0 0 By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 72.442 72.632 3 3.9213E-10 83136 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.797 65.389 104200000 0 0 0 0 0 11045000 0 6998500 0 9215600 10747000 14079000 4433200 0 47681000 38302 5018 34156 319338;319339;319340;319341;319342;319343;319344 252830;252831 252830 2 NPEISHMLNNPDIMR Oxidation (M) 1795.8345 0.83453794 5018 Q9UMX0 UBQLN1 Ubiquilin-1 yes yes 0 1 0 By matching By matching By MS/MS By matching By matching 10 0 5 1 1 1 1 1 61.758 62.113 2 6.0505E-05 70801 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.632 63.944 23760000 0 0 0 0 0 0 0 2499000 0 0 3972700 5129200 5052800 0 7106700 38303 5018 34156 319345;319346;319347;319348;319349 252832 252832 6358;6359 1 NPEITTNR Unmodified 943.47231 0.47230849 147 O00401 WASL Neural Wiskott-Aldrich syndrome protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 15.481 15.597 2 0.02128 15369 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 62.107 28.465 32769000 0 0 0 2102400 1703100 0 2408300 3247300 2281100 0 0 0 4465200 3980200 12581000 38304 147 34157 319350;319351;319352;319353;319354;319355;319356;319357 252833;252834 252833 2 NPELPNAAQAQK Unmodified 1279.6521 0.65206377 389 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 34.401 34.601 2 0.00013571 38542 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 86.67 67.692 71141000 0 0 0 4350900 3704000 0 3969800 4464200 3506900 5738000 14018000 8670400 6011200 6153200 10554000 38305 389 34158 319358;319359;319360;319361;319362;319363;319364;319365;319366;319367;319368 252835;252836;252837;252838;252839;252840;252841;252842;252843;252844 252843 10 NPENWAYYK Unmodified 1183.5298 0.52982336 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 50.217 50.501 2 0.0033419 56969 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 90.37 90.37 1887800000 0 0 0 0 0 0 77500000 113100000 95285000 277160000 516660000 808060000 0 0 0 38306 4226 34159 319369;319370;319371;319372;319373;319374 252845;252846;252847;252848;252849;252850;252851;252852 252845 7 NPEPELLVR Unmodified 1065.5819 0.58185894 2441 Q14697 GANAB Neutral alpha-glucosidase AB yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 57.963 58.081 2 0.003482 65815 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 107.01 88.629 553140000 0 0 0 18312000 24150000 30916000 25781000 27376000 16725000 37310000 73522000 54513000 37517000 55092000 151920000 38307 2441 34160 319375;319376;319377;319378;319379;319380;319381;319382;319383;319384;319385;319386 252853;252854;252855;252856;252857;252858;252859;252860;252861;252862;252863 252858 8 NPEQEPIPIVLR Unmodified 1403.7773 0.77726428 2146 Q07960 ARHGAP1 Rho GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.01 79.068 2 7.9452E-05 91287 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 89.08 76.552 366990000 0 0 0 21025000 14987000 41178000 25009000 21274000 16790000 40950000 35435000 40759000 27843000 28385000 53355000 38308 2146 34161 319387;319388;319389;319390;319391;319392;319393;319394;319395;319396;319397;319398 252864;252865;252866;252867;252868;252869;252870;252871;252872;252873;252874;252875 252865 12 NPEQVDLYQFMAK Oxidation (M) 1597.7446 0.74464352 1779 P56192 MARS Methionine--tRNA ligase, cytoplasmic yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 72.268 71.645 2 3.1128E-34 88964 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 178.1 160.24 302020000 0 189200000 5308300 5297900 8453200 12293000 9429100 7613100 7345500 16119000 12918000 0 10557000 0 17486000 38309 1779 34162 319399;319400;319401;319402;319403;319404;319405;319406;319407;319408;319409;319410 252876;252877;252878;252879;252880;252881;252882;252883;252884;252885;252886;252887 252879 2905 10 NPEQVDLYQFMAK Unmodified 1581.7497 0.7497289 1779 P56192 MARS Methionine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 7.4 3.68 4 1 10 1 3 1 1 1 2 1 1 2 1 1 84.313 82.443 2;3 5.5415E-26 102421 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 197.73 173.44 585850000 8812200 535300000 6264700 0 0 0 0 1292700 0 1580100 1561100 0 11215000 4565900 15258000 38310 1779 34162 319411;319412;319413;319414;319415;319416;319417;319418;319419;319420;319421;319422;319423;319424;319425 252888;252889;252890;252891;252892;252893;252894;252895;252896;252897;252898 252889 9 NPESTVPIAPELPPSTSTEQPVTPEPTSR Unmodified 3057.5142 0.51423946 2427 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 79.812 79.893 3 4.4305E-10 92464 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 44.743 32.31 46505000 0 0 0 1905500 0 3534800 0 4874800 3332700 4483000 4970600 7025300 4515200 4835000 7028600 38311 2427 34163 319426;319427;319428;319429;319430;319431;319432;319433;319434;319435 252899;252900;252901;252902 252902 4 NPEVEFCGYTTTHPSESK Unmodified 2081.9 0.90003454 914 P0DPB6 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 57.634 52.794 3 8.6999E-49 67782 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 139.9 134.9 160170000 0 156310000 3852800 0 0 0 0 0 0 0 0 0 0 0 0 38312 914 34164 319436;319437;319438 252903;252904;252905;252906 252903 4 NPEVGLKPVWYSPK Unmodified 1612.8613 0.86132826 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.33 3.77 2 4 2 1 1 1 1 74.026 71.472 2;3 1.9508E-18 93736 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 121.45 108.66 91612000 77713000 0 0 0 0 0 2803600 3017700 0 0 3743700 4334400 0 0 0 38313 848 34165 319439;319440;319441;319442;319443;319444 252907;252908;252909 252908 2 NPEVPVNFAEFSK Unmodified 1476.7249 0.72489436 274 O15347 HMGB3 High mobility group protein B3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.7 3.52 4 2 14 2 3 1 1 2 1 2 1 2 1 1 1 1 1 81.822 80.499 2 5.8007E-21 99650 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.2 123.84 3163200000 50562000 2783600000 37534000 15188000 19974000 21845000 20792000 18913000 22515000 26281000 49435000 51657000 14246000 30685000 0 38314 274 34166 319445;319446;319447;319448;319449;319450;319451;319452;319453;319454;319455;319456;319457;319458;319459;319460;319461;319462;319463;319464 252910;252911;252912;252913;252914;252915;252916;252917;252918;252919;252920;252921;252922;252923 252912 13 NPFDTFFGQR Unmodified 1227.5673 0.5672715 1191 P25685 DNAJB1 DnaJ homolog subfamily B member 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 83.75 83.879 2 0.0044035 96647 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.968 65.028 58390000 0 0 0 0 0 4110100 0 5634000 4128400 5829900 0 6386000 4645700 4581900 23073000 38315 1191 34167 319465;319466;319467;319468;319469;319470;319471;319472 252924;252925;252926 252924 3 NPFGLVPVLENSQGQLIYESAITCEYLDEAYPGK Unmodified 3813.8448 0.84475808 1984 P78417 GSTO1 Glutathione S-transferase omega-1 yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 100.3 94.528 3 8.8093E-22 119246 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.353 65.711 17483000 14480000 3002900 0 0 0 0 0 0 0 0 0 0 0 0 0 38316 1984 34168 319473;319474 252927;252928 252928 2 NPFGNAGLLLGEAGK Unmodified 1456.7674 0.76742787 1591 P49748 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 4 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84.609 83.185 2;3 1.6929E-70 96137 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 180.24 151.28 509100000 95809000 68748000 13206000 7353800 11330000 19182000 11465000 24741000 22224000 46880000 46279000 38665000 20520000 22097000 60598000 38317 1591 34169 319475;319476;319477;319478;319479;319480;319481;319482;319483;319484;319485;319486;319487;319488;319489;319490 252929;252930;252931;252932;252933;252934;252935;252936;252937;252938;252939;252940;252941;252942;252943 252933 15 NPFLAAVTTNRK Unmodified 1330.7357 0.73573382 1039 P16435 POR NADPH--cytochrome P450 reductase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 2 2 2 2 2 2 2 1 2 56.996 57.106 2;3 1.2333E-22 64715 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 151.22 138.93 522990000 0 0 0 35940000 34592000 35642000 39920000 44783000 43613000 36790000 42807000 80943000 0 69476000 58490000 38318 1039 34170 319491;319492;319493;319494;319495;319496;319497;319498;319499;319500;319501;319502;319503;319504;319505;319506;319507;319508;319509;319510;319511 252944;252945;252946;252947;252948;252949;252950;252951;252952;252953;252954;252955;252956;252957;252958;252959;252960 252951 10 NPFSSASGGFGSTATSNTSNLFGNSGAK Unmodified 2664.2052 0.20520135 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 79.373 79.515 3 7.7764E-101 91567 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 130.01 122.53 110420000 0 0 0 0 0 10026000 8417500 14306000 8994200 13731000 8640800 13210000 6459800 10432000 16205000 38319 1364 34171 319512;319513;319514;319515;319516;319517;319518;319519;319520;319521 252961;252962;252963;252964;252965;252966;252967;252968;252969;252970;252971 252965 11 NPFTLGDSSNPGQTER Unmodified 1718.786 0.78599106 477 O75312 ZPR1 Zinc finger protein ZPR1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 53.932 54.304 2 1.2114E-14 60572 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 123.95 117.84 34196000 0 0 0 0 0 2879100 0 0 0 0 6224900 6585200 1590100 3817700 13099000 38320 477 34172 319522;319523;319524;319525;319526;319527 252972;252973;252974;252975;252976 252973 5 NPFTLGDSSNPGQTERLQEFSQK Unmodified 2579.2252 0.22520851 477 O75312 ZPR1 Zinc finger protein ZPR1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 78.083 72.873 3 1.2618E-37 93325 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 114.63 107.34 85350000 51914000 22694000 10742000 0 0 0 0 0 0 0 0 0 0 0 0 38321 477 34173 319528;319529;319530 252977;252978;252979;252980 252978 4 NPGITSAVNK Unmodified 999.53491 0.53490874 2664 Q32P41 TRMT5 tRNA (guanine(37)-N1)-methyltransferase yes yes 0 0 0 By MS/MS 2 0 1 1 29.254 24.907 2 0.0024672 32534 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.48 81.96 71362000 0 71362000 0 0 0 0 0 0 0 0 0 0 0 0 0 38322 2664 34174 319531 252981 252981 1 NPGLLDDPNLVVK Unmodified 1392.7613 0.76127986 4099 Q9BQK8 LPIN3 Phosphatidate phosphatase LPIN3 yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 81.271 77.056 2 2.0576E-06 95732 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 135.16 127.24 48344000 300720 48043000 0 0 0 0 0 0 0 0 0 0 0 0 0 38323 4099 34175 319532;319533 252982 252982 1 NPGLWLESVR Unmodified 1169.6193 0.61930707 601 O94906 PRPF6 Pre-mRNA-processing factor 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 77.807 77.955 2 0.0074619 90071 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 71.349 55.767 56675000 0 0 0 0 0 6101900 2523900 4375300 3783400 5719200 5464900 7037700 4389900 5416100 11863000 38324 601 34176 319534;319535;319536;319537;319538;319539;319540;319541;319542;319543 252983;252984;252985;252986;252987;252988;252989;252990 252984 8 NPGNQAAYEHFETMK Unmodified 1735.7624 0.76241885 1073 P18206 VCL Vinculin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 48.378 48.617 3 0.00046676 53723 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.608 41.573 97731000 0 0 0 7258300 0 12142000 0 4936100 0 10886000 13527000 11594000 0 8453900 28934000 38325 1073 34177 319544;319545;319546;319547;319548;319549;319550;319551 252991;252992;252993;252994;252995;252996;252997 252993 7 NPGTVFLDYHIYEEDINISSNWEVFLEVLDGVEK Unmodified 3982.9153 0.91528049 3903 Q96K76 USP47 Ubiquitin carboxyl-terminal hydrolase 47 yes yes 0 0 0 By MS/MS 3 0 1 1 103.43 99.807 3 0.048314 104515 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 13.541 9.5056 2363400 2363400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38326 3903 34178 319552 252998 252998 1 NPGVGNGDDEAAELMQQVNVLK Oxidation (M) 2313.0907 0.090688861 2564 Q15691 MAPRE1 Microtubule-associated protein RP/EB family member 1 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 7.5 3.55 2 2 8 4 1 1 2 1 1 2 79.31 77.937 2;3 0 95310 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 270.51 263.14 308020000 0 239510000 0 0 0 7248900 3099100 0 0 23017000 8248100 5708600 0 0 21187000 38327 2564 34179 319553;319554;319555;319556;319557;319558;319559;319560;319561;319562;319563;319564 252999;253000;253001;253002;253003;253004;253005;253006;253007;253008 253002 4216 7 NPGVGNGDDEAAELMQQVNVLK Unmodified 2297.0958 0.095774239 2564 Q15691 MAPRE1 Microtubule-associated protein RP/EB family member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 3.23 5 2 2 1 4 2 1 1 90.554 87.328 2;3 2.6782E-84 109044 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 180.06 167.7 1325300000 20695000 1279600000 10596000 0 0 0 0 0 0 2709300 0 0 0 0 11685000 38328 2564 34179 319565;319566;319567;319568;319569;319570;319571;319572;319573 253009;253010;253011;253012;253013;253014;253015;253016;253017;253018;253019 253011 11 NPGVWLNTTQPLCK Unmodified 1626.8188 0.81881152 707 O95983 MBD3 Methyl-CpG-binding domain protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75.086 74.219 2 1.8305E-60 85198 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 179.57 144.69 195250000 22864000 28143000 0 7375800 6484200 8189700 11223000 8483200 6828900 12054000 16585000 18677000 15810000 13370000 19159000 38329 707 34180 319574;319575;319576;319577;319578;319579;319580;319581;319582;319583;319584;319585;319586;319587 253020;253021;253022;253023;253024;253025;253026;253027;253028;253029;253030;253031 253023 12 NPGYPQSEGLLGECMIR Oxidation (M) 1935.8819 0.88188206 4074 Q99961 SH3GL1 Endophilin-A2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.21 71.283 2 1.2419E-10 82003 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 90.614 75.074 80558000 0 0 0 3989900 4896200 6664700 4645100 3593300 4973200 7987100 9729800 12546000 6128400 6284700 9119900 38330 4074 34181 319588;319589;319590;319591;319592;319593;319594;319595;319596;319597;319598;319599 253032;253033;253034;253035;253036;253037;253038;253039;253040;253041;253042;253043;253044 253032 5579 13 NPGYPQSEGLLGECMIR Unmodified 1919.887 0.88696744 4074 Q99961 SH3GL1 Endophilin-A2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 11 1 1 1 2 1 1 1 1 1 1 79.086 79.122 2 1.9132E-52 91112 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 162.32 138.57 59711000 0 0 0 1523700 2574900 4438600 0 3614000 0 6957800 6350500 6520700 3576500 5325200 18829000 38331 4074 34181 319600;319601;319602;319603;319604;319605;319606;319607;319608;319609;319610 253045;253046;253047;253048;253049;253050;253051 253047 7 NPGYPQSEGLLGECMIRHGK Oxidation (M) 2258.0572 0.057220663 4074 Q99961 SH3GL1 Endophilin-A2 yes yes 0 1 1 By MS/MS 2 0 1 1 63.662 55.383 3 0.00012934 74702 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.103 51.302 9900300 9900300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38332 4074 34182 319611 253052 253052 5579 1 NPGYPQSEGLLGECMIRHGK Unmodified 2242.0623 0.062306041 4074 Q99961 SH3GL1 Endophilin-A2 yes yes 0 0 1 By MS/MS 2 0 2 2 75.521 67.39 3;4 3.449E-05 89015 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.045 43.113 25243000 25243000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38333 4074 34182 319612;319613 253053;253054 253054 2 NPHNDRFVLSK Unmodified 1325.684 0.6840326 1249 P29401 TKT Transketolase yes yes 0 0 1 By matching By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 2 2 1 2 25.683 26.199 2;3 0.00099135 26529 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 144.77 144.77 756140000 0 0 0 0 0 0 0 0 1299900 0 147480000 170920000 0 6715600 429720000 38334 1249 34183 319614;319615;319616;319617;319618;319619;319620;319621 253055;253056;253057;253058 253056 2 NPHQLFCK Unmodified 1042.5018 0.50183448 2542 Q15527 SURF2 Surfeit locus protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 31.094 25.376 2 0.038894 35571 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.134 54.17 31915000 31915000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38335 2542 34184 319622 253059 253059 1 NPHTVDRVPMGK Oxidation (M) 1365.6823 0.68231804 1493 P46019 PHKA2 Phosphorylase b kinase regulatory subunit alpha, liver isoform yes yes 0 1 1 By MS/MS 2 0 1 1 18.782 14.197 3 0.012853 20813 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.484 38.951 28426000 28426000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38336 1493 34185 319623 253060 253060 2349 1 NPHTVDRVPMGK Unmodified 1349.6874 0.68740341 1493 P46019 PHKA2 Phosphorylase b kinase regulatory subunit alpha, liver isoform yes yes 0 0 1 By MS/MS 2 0 1 1 29.143 23.523 3 0.01108 33362 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 39.581 22.369 20707000 20707000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38337 1493 34185 319624 253061 253061 1 NPHVALYALEVMESVVK Unmodified 1897.9972 0.99716981 230 O14964 HGS Hepatocyte growth factor-regulated tyrosine kinase substrate yes yes 0 0 0 By MS/MS 3 0 1 1 99.557 96.148 3 0.022866 115437 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 19.071 14.001 1374400 0 1374400 0 0 0 0 0 0 0 0 0 0 0 0 0 38338 230 34186 319625 253062 253062 1 NPIDHVSFYCK Unmodified 1378.634 0.63397086 5180 Q9Y3Z3 SAMHD1 Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 62.952 56.393 2;3 0.024944 75703 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 31.478 15.1 59240000 47232000 10815000 1192100 0 0 0 0 0 0 0 0 0 0 0 0 38339 5180 34187 319626;319627;319628;319629 253063;253064 253063 2 NPIGFVEK Unmodified 902.48617 0.48616764 3283 Q8IYH5 ZZZ3 ZZ-type zinc finger-containing protein 3 yes yes 0 0 0 By MS/MS 2 0 1 1 53.984 48.191 2 0.042013 62428 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.825 31.851 53227000 0 53227000 0 0 0 0 0 0 0 0 0 0 0 0 0 38340 3283 34188 319630 253065 253065 1 NPIHNIPSTLDK Unmodified 1347.7147 0.71466402 2970 Q6T4R5 NHS Nance-Horan syndrome protein yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 53.996 47.961 3 0.026345 65920 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.286 40.098 39299000 31736000 0 7563800 0 0 0 0 0 0 0 0 0 0 0 0 38341 2970 34189 319631;319632 253066 253066 0 NPIYSQPAWMNDSHK Unmodified 1786.8097 0.80970339 2829 Q5VYS8 ZCCHC6 Terminal uridylyltransferase 7 yes yes 0 0 0 By MS/MS 2 0 1 1 69.945 61.659 3 0.00028238 82240 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.08 64.394 12200000 12200000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38342 2829 34190 319633 253067 253067 1 NPLAATHEFK Unmodified 1126.5771 0.57710791 4888 Q9UGR2 ZC3H7B Zinc finger CCCH domain-containing protein 7B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 38.33 37.215 2 0.0012687 40880 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 108.15 98.933 163580000 83348000 0 17418000 0 0 0 8862500 8091800 8465500 0 0 13054000 16065000 8270600 0 38343 4888 34191 319634;319635;319636;319637;319638;319639;319640;319641 253068;253069;253070;253071;253072;253073;253074;253075 253068 7 NPLGSTHPEATLK Unmodified 1363.7096 0.70957864 1638 P50851 LRBA Lipopolysaccharide-responsive and beige-like anchor protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 37.068 37.265 3 0.0083258 41173 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 41.644 31.095 107770000 0 0 0 8030400 5789400 11753000 0 7716900 0 10399000 10241000 18452000 8532800 11596000 15263000 38344 1638 34192 319642;319643;319644;319645;319646;319647;319648;319649;319650;319651 253076;253077 253077 2 NPLIINSIIDK Unmodified 1238.7234 0.72343779 5040 Q9UNQ2 DIMT1 Probable dimethyladenosine transferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.6 3.67 3 7 1 1 1 1 1 1 1 1 1 1 83.276 81.739 2 0.00051336 102489 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.78 99.11 151930000 68296000 46539000 13089000 2869300 3231400 4599100 2750600 2688400 3543400 4320800 0 0 0 0 0 38345 5040 34193 319652;319653;319654;319655;319656;319657;319658;319659;319660;319661 253078;253079;253080;253081;253082;253083;253084;253085 253080 8 NPLLITEEDAFK Unmodified 1388.7187 0.71874635 4890 Q9UH65 SWAP70 Switch-associated protein 70 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.4 3.68 4 1 10 1 3 1 1 1 1 1 1 1 1 1 1 1 81.012 79.835 2 1.2818E-08 92581 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 137.98 120.11 1442200000 27727000 1261800000 22889000 0 5920300 16311000 10551000 10638000 8788200 21262000 18600000 15370000 8407300 14006000 0 38346 4890 34194 319662;319663;319664;319665;319666;319667;319668;319669;319670;319671;319672;319673;319674;319675;319676 253086;253087;253088;253089;253090;253091;253092;253093;253094;253095;253096;253097;253098;253099;253100;253101;253102;253103 253088 18 NPLPEAEAGK Unmodified 1024.5189 0.51892433 2200 Q12872 SFSWAP Splicing factor, suppressor of white-apricot homolog yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 27.211 26.933 2 0.003743 27802 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 75.378 59.716 76132000 0 13907000 0 4442800 3923600 5282400 0 0 0 0 9466200 10703000 6823400 10521000 11063000 38347 2200 34195 319677;319678;319679;319680;319681;319682;319683;319684;319685;319686 253104;253105;253106;253107;253108;253109;253110;253111;253112 253109 9 NPLPEYLSR Unmodified 1087.5662 0.56620887 2053 Q01433 AMPD2 AMP deaminase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 59.968 60.079 2 0.013982 68113 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 58.981 26.088 58686000 0 0 0 2497400 3792500 0 3752200 4490900 0 6735400 7141200 6604100 5572400 5369900 12730000 38348 2053 34196 319687;319688;319689;319690;319691;319692;319693;319694;319695;319696 253113;253114;253115;253116;253117;253118;253119 253119 7 NPLPPSVGVVDK Unmodified 1220.6765 0.6764876 3405 Q8NC51 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.15 3.9 2 4 1 13 2 4 1 1 1 1 1 1 1 2 1 1 1 1 1 64.704 63.908 2 5.496E-08 67044 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 120.45 108.5 1468300000 44024000 1009000000 8281300 21029000 16801000 24706000 25861000 21793000 23477000 30671000 41784000 50322000 37267000 39399000 73831000 38349 3405 34197 319697;319698;319699;319700;319701;319702;319703;319704;319705;319706;319707;319708;319709;319710;319711;319712;319713;319714;319715;319716 253120;253121;253122;253123;253124;253125;253126;253127;253128;253129;253130;253131;253132;253133;253134;253135;253136;253137;253138;253139;253140;253141;253142;253143;253144;253145;253146;253147;253148;253149;253150;253151;253152;253153;253154;253155;253156;253157;253158;253159;253160;253161;253162;253163;253164;253165;253166;253167;253168;253169;253170;253171;253172;253173;253174;253175;253176;253177;253178;253179;253180;253181;253182;253183;253184;253185;253186;253187;253188 253121 69 NPLPPSVGVVDKK Unmodified 1348.7715 0.77145062 3405 Q8NC51 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 50.766 48.722 3 9.7004E-11 61108 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 107.65 100.44 470660000 54825000 235790000 29920000 0 0 0 16602000 0 0 14059000 37772000 31892000 0 22477000 27326000 38350 3405 34198 319717;319718;319719;319720;319721;319722;319723;319724;319725;319726;319727;319728;319729 253189;253190;253191;253192;253193;253194;253195;253196;253197;253198;253199;253200;253201;253202;253203;253204;253205;253206 253194 17 NPLPPSVGVVDKKEETQPPVALK Unmodified 2441.353 0.3529752 3405 Q8NC51 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 0 0 2 By MS/MS 2 0 1 1 72.614 69.529 4 0.0012838 85277 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 30.652 28.084 11674000 0 0 11674000 0 0 0 0 0 0 0 0 0 0 0 0 38351 3405 34199 319730 253207;253208 253208 2 NPLPTLEGSIQNVELK Unmodified 1750.9465 0.94651445 3124 Q7Z7G8 VPS13B Vacuolar protein sorting-associated protein 13B yes yes 0 0 0 By MS/MS 2 0 1 1 88.219 83.377 3 8.9224E-05 103704 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.685 51.257 15784000 0 15784000 0 0 0 0 0 0 0 0 0 0 0 0 0 38352 3124 34200 319731 253209 253209 1 NPLPVTLTNVVFR Unmodified 1468.8402 0.84019889 1146 P22735 TGM1 Protein-glutamine gamma-glutamyltransferase K yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 90.674 90.703 2 0.0093255 105143 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 46.606 46.606 8974000 0 0 0 1304900 0 965440 0 2990600 0 2110000 0 1603000 0 0 0 38353 1146 34201 319732;319733;319734;319735;319736 253210;253211;253212;253213 253210 4 NPLTMENK Unmodified 945.45897 0.45896661 4862 Q9UBW7 ZMYM2 Zinc finger MYM-type protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 29.497 25.149 2 0.013731 32964 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.093 76.233 18678000 0 18678000 0 0 0 0 0 0 0 0 0 0 0 0 0 38354 4862 34202 319737 253214 253214 1 NPMDLSTIK Unmodified 1017.5165 0.51648149 3662;261 O15164;Q92793 TRIM24;CREBBP Transcription intermediary factor 1-alpha;CREB-binding protein no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 53.328 53.483 2 0.0099322 60955 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 65.305 45.669 157920000 0 0 0 0 10487000 19920000 15751000 11898000 0 25095000 25449000 0 0 18408000 30908000 38355 261;3662 34203 319738;319739;319740;319741;319742;319743;319744;319745;319746;319747 253215;253216;253217;253218;253219;253220;253221;253222;253223;253224 253220 10 NPMDLSTIK Oxidation (M) 1033.5114 0.51139611 3662;261 O15164;Q92793 TRIM24;CREBBP Transcription intermediary factor 1-alpha;CREB-binding protein no no 0 1 0 By MS/MS 2 0 1 1 36.731 31.816 2 0.021843 41618 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.747 44.853 38919000 0 38919000 0 0 0 0 0 0 0 0 0 0 0 0 0 38356 261;3662 34203 319748 253225 253225 1 NPMDMGTIK Unmodified 1005.4623 0.46233743 2493 Q15059 BRD3 Bromodomain-containing protein 3 yes yes 0 0 0 By MS/MS 2 0 1 1 48.559 42.911 2 0.020334 55810 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.378 56.648 32873000 0 32873000 0 0 0 0 0 0 0 0 0 0 0 0 0 38357 2493 34204 319749 253226 253226 1 NPMVETLGTVLQLK Oxidation (M) 1557.8436 0.84362928 2122 Q06124 PTPN11 Tyrosine-protein phosphatase non-receptor type 11 yes yes 0 1 0 By MS/MS 2 0 1 1 89.125 84.253 2 0.0057854 104674 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 59.198 43.001 38928000 0 38928000 0 0 0 0 0 0 0 0 0 0 0 0 0 38358 2122 34205 319750 253227 253227 3426 1 NPMVETLGTVLQLK Unmodified 1541.8487 0.84871466 2122 Q06124 PTPN11 Tyrosine-protein phosphatase non-receptor type 11 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 97.266 89.136 2;3 0.00070676 115068 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.019 56.385 10158000 10158000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38359 2122 34205 319751;319752 253228;253229 253229 2 NPNAMLVNLEEPLASTYQDILYQAK Oxidation (M) 2850.411 0.41096037 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 1 0 By MS/MS By MS/MS 2.25 0.433 3 1 3 1 98.148 94.34 2;3 8.4356E-181 116437 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 222.45 206.81 344850000 0 338650000 6200500 0 0 0 0 0 0 0 0 0 0 0 0 38360 1518 34206 319753;319754;319755;319756 253230;253231;253232;253233 253231 2408 3 NPNAMLVNLEEPLASTYQDILYQAK Unmodified 2834.416 0.41604575 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 99.464 95.967 3 1.0941E-72 118486 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.33 124.61 480900000 0 475810000 5093500 0 0 0 0 0 0 0 0 0 0 0 0 38361 1518 34206 319757;319758;319759 253234;253235;253236 253234 2 NPNAPFQIR Unmodified 1055.5512 0.55122751 594 O94864 SUPT7L STAGA complex 65 subunit gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 52.844 53.075 2 0.0036212 61163 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 122.5 86.622 115670000 0 0 0 0 8785100 0 0 13277000 0 27147000 0 34957000 0 0 31505000 38362 594 34207 319760;319761;319762;319763;319764;319765;319766;319767;319768 253237;253238;253239;253240;253241;253242;253243;253244;253245 253245 9 NPNAPMLPPPK Oxidation (M) 1190.6118 0.61177885 244 O15042 U2SURP U2 snRNP-associated SURP motif-containing protein yes yes 0 1 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 40.089 40.089 2 0.0049679 44623 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 53.775 39.638 13443000 0 0 0 3771500 0 0 0 0 0 5230000 0 0 4441400 0 0 38363 244 34208 319769;319770;319771 253246;253247 253246 333 2 NPNEGEK Unmodified 786.3508 0.35079637 1303 P31689 DNAJA1 DnaJ homolog subfamily A member 1 yes yes 0 0 0 By MS/MS 1 0 1 1 106.9 112.17 2 0.023473 92959 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 104.75 15.377 45016000 45016000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38364 1303 34209 319772 253248 253248 1 NPNGPYPYTLK Unmodified 1262.6295 0.62953741 1008 P14866 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52.78 51.703 2 4.7039E-06 57880 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 147.95 126.48 3628800000 91387000 2752000000 23858000 37513000 23729000 54281000 51566000 53051000 43267000 60877000 72890000 111020000 61343000 64803000 127310000 38365 1008 34210 319773;319774;319775;319776;319777;319778;319779;319780;319781;319782;319783;319784;319785;319786;319787 253249;253250;253251;253252;253253;253254;253255;253256;253257;253258;253259;253260;253261;253262;253263;253264;253265;253266;253267 253262 18 NPNLLFTLK Unmodified 1058.6124 0.61243078 3984 Q96S59 RANBP9 Ran-binding protein 9 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 81.17 81.333 2 0.019674 93206 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 53.775 33.15 19431000 0 0 0 0 0 0 0 0 0 0 0 0 0 5100600 14331000 38366 3984 34211 319788;319789 253268;253269 253269 2 NPNLPPETVDSLK Unmodified 1422.7355 0.73545904 795 P05090 APOD Apolipoprotein D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 2 1 1 1 61.564 61.62 2 6.4519E-05 71222 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 104.79 94.508 68594000 0 0 0 8480900 5605100 4857500 4019300 8415600 2285800 10838000 6135200 6993000 6822200 4141300 0 38367 795 34212 319790;319791;319792;319793;319794;319795;319796;319797;319798;319799;319800;319801;319802 253270;253271;253272;253273;253274;253275;253276;253277;253278;253279;253280;253281;253282;253283;253284;253285;253286;253287;253288 253285 19 NPNNPNAHGDFLK Unmodified 1436.6797 0.6796755 3257 Q8IXB1 DNAJC10 DnaJ homolog subfamily C member 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 36.98 32.04 3 2.6105E-06 44499 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.069 71.123 133380000 52888000 32090000 48406000 0 0 0 0 0 0 0 0 0 0 0 0 38368 3257 34213 319803;319804;319805 253289;253290;253291 253289 3 NPNNSSLSEEIK Unmodified 1330.6365 0.63647328 4561 Q9NQ89 C12orf4 Protein C12orf4 yes yes 0 0 0 By MS/MS 2 0 1 1 38.97 33.959 2 3.1006E-14 44312 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.57 115.47 14122000 0 14122000 0 0 0 0 0 0 0 0 0 0 0 0 0 38369 4561 34214 319806 253292 253292 1 NPNNVLIEQAELEK Unmodified 1609.8312 0.83115034 3189 Q86X53 ERICH1 Glutamate-rich protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 69.842 69.258 2 1.022E-43 87528 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 167.11 153.21 136380000 0 78136000 0 3383600 3452300 5149300 3957800 3453600 2640900 5333200 5760200 4577400 4972500 6415300 9149000 38370 3189 34215 319807;319808;319809;319810;319811;319812;319813;319814;319815;319816;319817;319818;319819;319820 253293;253294;253295;253296;253297;253298;253299;253300;253301 253295 9 NPNPIESLEK Unmodified 1139.5823 0.58225287 1396 P38398 BRCA1 Breast cancer type 1 susceptibility protein yes yes 0 0 0 By MS/MS 2 0 1 1 59.625 53.782 2 0.0014764 69243 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.76 84.488 18098000 0 18098000 0 0 0 0 0 0 0 0 0 0 0 0 0 38371 1396 34216 319821 253302 253302 1 NPNTSEPQHLLVMK Oxidation (M) 1622.8086 0.80864076 792 P05023 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 0 1 0 By matching By MS/MS 2 0 2 1 1 48 43.251 3 0.0075141 54431 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 42.209 30.77 14662000 0 3987100 10675000 0 0 0 0 0 0 0 0 0 0 0 0 38372 792 34217 319822;319823 253303 253303 956 1 NPPAAYIQK Unmodified 1000.5342 0.53418046 664 O95466 FMNL1 Formin-like protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 34.019 29.375 2 0.048065 38439 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.189 36.371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38373 664 34218 319824 253304 253304 1 NPPGASTYNK Unmodified 1047.4985 0.49852324 4162 Q9BUJ2 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.364 12.515 2 0.001444 11791 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 91.087 71.09 240460000 0 0 0 14029000 14036000 15504000 18173000 16516000 16631000 25979000 21394000 31489000 20193000 20444000 26075000 38374 4162 34219 319825;319826;319827;319828;319829;319830;319831;319832;319833;319834;319835;319836 253305;253306;253307;253308;253309;253310;253311;253312;253313;253314;253315;253316;253317;253318 253306 10 NPPGFAFVEFEDPRDAADAVR Unmodified 2319.092 0.09200949 2017 P84103 SRSF3 Serine/arginine-rich splicing factor 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 87.016 87.111 3 2.1776E-07 100763 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.47 58.255 72742000 0 0 0 2829700 0 5635100 1974900 4968400 4006700 9584500 6709000 5882000 0 4311600 26840000 38375 2017 34220 319837;319838;319839;319840;319841;319842;319843;319844;319845;319846 253319;253320;253321;253322;253323;253324;253325;253326;253327 253321 9 NPPGFAFVEFEDPRDAEDAVR Unmodified 2377.0975 0.097488798 2619 Q16629 SRSF7 Serine/arginine-rich splicing factor 7 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 86.534 86.667 3 0.00024192 100194 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.347 37.635 10936000 0 0 0 0 0 0 0 0 0 2634900 0 0 0 0 8301400 38376 2619 34221 319847;319848 253328 253328 1 NPPGYLEDSFVK Unmodified 1364.6612 0.66123147 174 O00712 NFIB Nuclear factor 1 B-type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 69.654 69.861 2 0.0013009 80062 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 69.01 55.633 483370000 0 0 0 0 0 41912000 49417000 0 0 54485000 85868000 55990000 48943000 59867000 86888000 38377 174 34222 319849;319850;319851;319852;319853;319854;319855;319856 253329;253330;253331;253332;253333;253334 253329 5 NPPLRNVASEGEGQILEPIGTESK Unmodified 2534.2976 0.29764517 4900 Q9UHF7 TRPS1 Zinc finger transcription factor Trps1 yes yes 0 0 1 By MS/MS 2 0 1 1 75.875 73.113 3 0.0023139 89100 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 36.256 33.532 5243800 0 0 5243800 0 0 0 0 0 0 0 0 0 0 0 0 38378 4900 34223 319857 253335 253335 1 NPPNQSSNERPPSLLVIETK Unmodified 2219.1546 0.15460975 244 O15042 U2SURP U2 snRNP-associated SURP motif-containing protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70.438 69.711 3 8.3976E-06 87192 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 73.138 62.997 372070000 15796000 0 26235000 15090000 17020000 25918000 21142000 19824000 24932000 31721000 29500000 43057000 26541000 25861000 49435000 38379 244 34224 319858;319859;319860;319861;319862;319863;319864;319865;319866;319867;319868;319869;319870;319871 253336;253337;253338;253339;253340;253341;253342;253343;253344;253345 253341 8 NPPPEFAK Unmodified 898.45487 0.45486751 424 O60684 KPNA6 Importin subunit alpha-7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.227 26.427 2 0.036816 27039 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 51.662 25.836 87763000 0 0 0 3318900 3193600 9641700 5861500 4991600 4443200 9902300 8683200 9283500 7600900 9002500 11840000 38380 424 34225 319872;319873;319874;319875;319876;319877;319878;319879;319880;319881;319882;319883 253346 253346 1 NPPPNADPNMK Oxidation (M) 1209.5448 0.5448215 3737 Q96AE4 FUBP1 Far upstream element-binding protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 10.454 10.57 2 0.00022373 8603 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 99.815 89.904 61467000 0 0 0 3854100 4731800 3681300 5325900 3799400 3546400 5741900 0 9388500 5424200 5748600 10225000 38381 3737 34226 319884;319885;319886;319887;319888;319889;319890;319891;319892;319893;319894 253347;253348;253349;253350;253351;253352;253353;253354;253355;253356;253357 253350 5314 11 NPPPNADPNMK Unmodified 1193.5499 0.54990688 3737 Q96AE4 FUBP1 Far upstream element-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 2 1 1 2 1 1 1 1 1 2 19.135 19.559 2 8.6251E-28 18994 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 173.37 163.96 76824000 0 0 0 0 0 0 0 9184800 464410 0 0 19089000 0 0 48086000 38382 3737 34226 319895;319896;319897;319898;319899;319900;319901;319902;319903;319904;319905;319906;319907;319908;319909 253358;253359;253360;253361;253362;253363;253364;253365;253366;253367;253368;253369;253370;253371;253372;253373 253363 16 NPPPNSDPNLRR Unmodified 1375.6957 0.69565991 3873 Q96I24 FUBP3 Far upstream element-binding protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.951 17.13 3 0.0079682 17548 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 28.903 17.212 99841000 0 0 0 5127700 5548500 7635800 6607400 7324900 6406700 6906000 10875000 11830000 10107000 8492100 12980000 38383 3873 34227 319910;319911;319912;319913;319914;319915;319916;319917;319918;319919;319920;319921 253374;253375;253376;253377;253378;253379 253376 6 NPPTYSSSTSMAAVIGNPK Unmodified 1920.9251 0.92512708 3745 Q96AY4 TTC28 Tetratricopeptide repeat protein 28 yes yes 0 0 0 By MS/MS 2 0 1 1 73.77 68.576 2 1.2495E-21 86269 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.53 104.8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38384 3745 34228 319922 253380 253380 1 NPQAGVPPFSSLK Unmodified 1340.7089 0.70885036 3155 Q86UU0 BCL9L B-cell CLL/lymphoma 9-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.72 2 13 1 1 1 1 1 1 1 1 2 1 1 1 1 1 69.352 68.551 2 2.012E-11 78697 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 119.53 40.054 254610000 8116000 91937000 0 8951000 10316000 7872300 11827000 9623900 11768000 21768000 11697000 15506000 10622000 11762000 22841000 38385 3155 34229 319923;319924;319925;319926;319927;319928;319929;319930;319931;319932;319933;319934;319935;319936;319937 253381;253382;253383;253384;253385;253386;253387;253388;253389;253390;253391;253392;253393;253394 253386 13 NPQAHIEGNMK Unmodified 1237.5874 0.58735502 411 O60547 GMDS GDP-mannose 4,6 dehydratase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.65 3.65 5 12 1 2 2 1 1 1 1 1 1 1 1 1 1 1 1 19.303 18.34 2;3 1.3792E-16 23474 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 169.93 139.68 730140000 66814000 344790000 196040000 6365200 7433100 9332700 9205200 12342000 5700600 10948000 12141000 15856000 7073200 6893500 19214000 38386 411 34230 319938;319939;319940;319941;319942;319943;319944;319945;319946;319947;319948;319949;319950;319951;319952;319953;319954 253395;253396;253397;253398;253399;253400;253401 253400 5 NPQAHIEGNMK Oxidation (M) 1253.5823 0.58226964 411 O60547 GMDS GDP-mannose 4,6 dehydratase yes yes 0 1 0 By MS/MS 2 0 1 1 12.566 8.6239 3 0.032643 13365 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.879 45.879 27851000 27851000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38387 411 34230 319955 253402 253402 0 NPQAVLDVLK Unmodified 1095.6288 0.62880913 2248 Q13177;O75914 PAK2;PAK3 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34;Serine/threonine-protein kinase PAK 3 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 76.201 75.069 2 0.00056703 86541 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 129.38 89.381 733670000 16775000 508440000 20113000 5883000 5121600 20610000 10540000 10175000 12350000 17968000 16904000 23249000 11029000 16342000 38172000 38388 2248 34231 319956;319957;319958;319959;319960;319961;319962;319963;319964;319965;319966;319967;319968;319969;319970;319971 253403;253404;253405;253406;253407;253408;253409;253410;253411;253412;253413;253414;253415 253403 13 NPQAYLNYK Unmodified 1109.5506 0.55055881 2189 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 52.015 45.134 2 0.0073818 59075 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.352 78.576 128290000 13551000 114740000 0 0 0 0 0 0 0 0 0 0 0 0 0 38389 2189 34232 319972;319973 253416;253417;253418 253417 3 NPQMGDPASLDHK Unmodified 1408.6405 0.6405128 3979 Q96RU3 FNBP1 Formin-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By matching 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 33.503 33.232 2;3 0.00012831 42977 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.943 85.987 98014000 0 13208000 0 8294300 4873300 7674900 6240200 7824500 0 0 11166000 10461000 7101700 8561900 12608000 38390 3979 34233 319974;319975;319976;319977;319978;319979;319980;319981;319982;319983;319984 253419;253420 253419 2 NPQMGDPASLDHK Oxidation (M) 1424.6354 0.63542742 3979 Q96RU3 FNBP1 Formin-binding protein 1 yes yes 0 1 0 By MS/MS By MS/MS 2.67 0.471 1 2 1 2 21.962 17.873 3 0.0040599 23702 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.004 54.472 79119000 95908 79023000 0 0 0 0 0 0 0 0 0 0 0 0 0 38391 3979 34233 319985;319986;319987 253421 253421 5463 0 NPQMGDPGSLQPK Oxidation (M) 1383.6453 0.64526383 2766 Q5T0N5 FNBP1L Formin-binding protein 1-like yes yes 0 1 0 By MS/MS 2 0 1 1 29.101 24.753 2 0.015627 32485 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 52.903 45.254 11634000 0 11634000 0 0 0 0 0 0 0 0 0 0 0 0 0 38392 2766 34234 319988 253422 253422 4393 1 NPQMGDPGSLQPK Unmodified 1367.6503 0.65034921 2766 Q5T0N5 FNBP1L Formin-binding protein 1-like yes yes 0 0 0 By MS/MS 2 0 1 1 45.357 40.036 2 7.2907E-18 51954 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.82 107.97 60157000 0 60157000 0 0 0 0 0 0 0 0 0 0 0 0 0 38393 2766 34234 319989 253423;253424 253423 2 NPQNSSQSADGLR Unmodified 1372.6331 0.63311924 909 P0DN76;Q01081 U2AF1 Splicing factor U2AF 35 kDa subunit yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.707 14.875 2 3.9825E-215 14200 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 241.03 224.49 522920000 0 0 0 42541000 18842000 40716000 33723000 27410000 28888000 48424000 40156000 53760000 58682000 42621000 87158000 38394 909 34235 319990;319991;319992;319993;319994;319995;319996;319997;319998;319999;320000;320001 253425;253426;253427;253428;253429;253430;253431;253432;253433;253434;253435;253436;253437 253427 13 NPQNSTVLAR Unmodified 1098.5782 0.57817054 2289 Q13428 TCOF1 Treacle protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 22.342 22.613 2 0.009563 22449 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 57.55 35.779 44145000 0 0 0 0 0 3747700 2816800 2705000 1820700 4682500 0 13040000 4758100 4200500 6374300 38395 2289 34236 320002;320003;320004;320005;320006;320007;320008;320009;320010 253438;253439;253440;253441;253442;253443;253444;253445 253443 7 NPQNYLLGK Unmodified 1045.5556 0.55564418 3025 Q70E73 RAPH1 Ras-associated and pleckstrin homology domains-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 48.383 47.425 2 0.0051133 53444 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 83.206 53.131 240890000 35375000 84276000 0 0 7287300 10649000 10517000 9147700 0 13492000 11099000 17709000 11148000 10568000 19623000 38396 3025 34237 320011;320012;320013;320014;320015;320016;320017;320018;320019;320020;320021;320022 253446;253447;253448;253449;253450;253451;253452;253453;253454 253454 9 NPQQHLNAQPQVTMQQPAVHVQGQEPLTASMLASAPPQEQK 2 Oxidation (M) 4488.1914 0.19142932 958 P11940 PABPC1 Polyadenylate-binding protein 1 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 68.511 68.732 4 5.3105E-173 78755 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 132.28 131.12 248570000 0 0 0 0 0 42019000 18500000 0 0 49307000 46853000 37859000 24640000 0 29390000 38397 958 34238 320023;320024;320025;320026;320027;320028;320029 253455;253456;253457;253458;253459;253460;253461 253461 1247;1248 7 NPQQHLNAQPQVTMQQPAVHVQGQEPLTASMLASAPPQEQK Oxidation (M) 4472.1965 0.1965147 958 P11940 PABPC1 Polyadenylate-binding protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 2 74.209 74.418 4 4.1906E-75 86126 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.465 79.245 130270000 0 0 0 0 0 0 6497600 11142000 0 0 15762000 25594000 8691500 10247000 52333000 38398 958 34238 320030;320031;320032;320033;320034;320035;320036;320037 253462;253463;253464;253465;253466 253463 1247;1248 5 NPQQQESLK Unmodified 1070.5356 0.53563702 693 O95816 BAG2 BAG family molecular chaperone regulator 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 10.371 10.468 2 0.05023 8290 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.075 14.821 8054700 0 0 0 0 586480 953240 598490 0 0 1239200 0 0 0 1628000 3049300 38399 693 34239 320038;320039;320040;320041;320042;320043 253467 253467 1 NPQREEIIGNGEQQYVYLK Unmodified 2277.139 0.13895968 2704 Q53H82 LACTB2 Beta-lactamase-like protein 2 yes yes 0 0 1 By MS/MS 10 0 1 1 66.226 66.763 3 1.3121E-17 75834 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.447 88.03 8433400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8433400 38400 2704 34240 320044 253468;253469 253468 2 NPQSYLYLVK Unmodified 1223.655 0.65502388 121 O00159 MYO1C Unconventional myosin-Ic yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.829 74.892 2 0.010212 86428 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 56.258 35.356 89242000 0 0 0 4575300 6011700 8571600 6554200 6470500 6742600 10196000 8717200 11498000 6131900 5030600 8742300 38401 121 34241 320045;320046;320047;320048;320049;320050;320051;320052;320053;320054;320055;320056 253470;253471;253472;253473;253474;253475;253476 253470 7 NPQVPSDGGVR Unmodified 1124.5574 0.5574351 4900 Q9UHF7 TRPS1 Zinc finger transcription factor Trps1 yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 26.515 26.788 2 0.018958 27650 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.308 20.568 31888000 0 0 0 0 2418400 0 2967700 0 2171500 3770300 4449400 3939900 3730100 4254700 4185700 38402 4900 34242 320057;320058;320059;320060;320061;320062;320063;320064;320065 253477;253478 253477 2 NPRESTGNMVTGQTVCK Unmodified 1877.8724 0.87238001 2476 Q15021 NCAPD2 Condensin complex subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 34.077 29.323 3 8.7072E-10 38683 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.051 60.659 414210000 354220000 30782000 29204000 0 0 0 0 0 0 0 0 0 0 0 0 38403 2476 34243 320066;320067;320068 253479;253480;253481;253482 253480 4 NPRESTGNMVTGQTVCK Oxidation (M) 1893.8673 0.86729463 2476 Q15021 NCAPD2 Condensin complex subunit 1 yes yes 0 1 1 By MS/MS By MS/MS 2 0 4 2 2 22.112 18.263 2;3 6.1051E-11 25849 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.65 94.638 165050000 104600000 0 60444000 0 0 0 0 0 0 0 0 0 0 0 0 38404 2476 34243 320069;320070;320071;320072 253483;253484;253485 253484 4081 3 NPRIVLLDSSLEYK Unmodified 1645.9039 0.90392136 1570 P49368 CCT3 T-complex protein 1 subunit gamma yes yes 0 0 1 By MS/MS By MS/MS 2.2 0.4 4 1 4 1 83.568 77.391 2;3 2.768E-28 99610 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 126.83 76.548 415930000 397840000 18093000 0 0 0 0 0 0 0 0 0 0 0 0 0 38405 1570 34244 320073;320074;320075;320076;320077 253486;253487;253488;253489;253490;253491;253492 253492 6 NPSAAFFCVAR Unmodified 1238.5866 0.58662674 476 O75223 GGCT Gamma-glutamylcyclotransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 71.72 71.779 2 0.0001301 82657 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 109.71 98.563 141650000 0 0 0 52359000 5349800 3992900 0 6239500 3706200 5617100 12155000 10318000 8518000 10621000 22775000 38406 476 34245 320078;320079;320080;320081;320082;320083;320084;320085;320086;320087;320088 253493;253494;253495;253496;253497;253498;253499;253500;253501;253502;253503;253504 253497 12 NPSDSAVHSPFTK Unmodified 1385.6575 0.65754307 2380 Q14157 UBAP2L Ubiquitin-associated protein 2-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.88 3.47 7 2 24 3 4 2 2 2 2 2 2 2 2 2 2 2 2 2 38.895 37.786 2;3 0 40529 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 279.86 239.51 4285600000 372510000 560600000 151300000 143360000 151900000 202600000 303300000 214810000 246180000 314980000 331000000 287250000 390580000 244680000 370530000 38407 2380 34246 320089;320090;320091;320092;320093;320094;320095;320096;320097;320098;320099;320100;320101;320102;320103;320104;320105;320106;320107;320108;320109;320110;320111;320112;320113;320114;320115;320116;320117;320118;320119;320120;320121 253505;253506;253507;253508;253509;253510;253511;253512;253513;253514;253515;253516;253517;253518;253519;253520;253521;253522;253523;253524;253525;253526;253527;253528;253529;253530;253531;253532;253533;253534;253535;253536;253537;253538 253514 21 NPSERGQSQLSNPTDDSWK Unmodified 2144.9723 0.97228828 5276 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 yes yes 0 0 1 By MS/MS 2 0 1 1 44.74 40.925 3 6.6194E-05 51601 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 62.658 56.056 12060000 0 0 12060000 0 0 0 0 0 0 0 0 0 0 0 0 38408 5276 34247 320122 253539;253540;253541 253539 3 NPSEYHYMK Unmodified 1167.5019 0.50189405 617 O95059 RPP14 Ribonuclease P protein subunit p14 yes yes 0 0 0 By MS/MS 2 0 1 1 27.934 22.416 2 0.04935 31817 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.806 78.662 17000000 17000000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38409 617 34248 320123 253542 253542 0 NPSGINDDYGQLK Unmodified 1419.663 0.66302238 448 O60934 NBN Nibrin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 45.297 45.532 2 0.0057417 50025 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.278 46.498 77276000 0 0 0 0 3456000 4777000 4703500 5685400 3444800 9345000 10979000 12463000 9724900 0 12697000 38410 448 34249 320124;320125;320126;320127;320128;320129;320130;320131;320132;320133 253543;253544;253545;253546;253547;253548 253544 6 NPSGLTQYIPVLVDSFLPLLK Unmodified 2313.2984 0.29842044 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 106.25 102.03 3 0.00061831 122774 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 35.421 32.183 3037400 0 3037400 0 0 0 0 0 0 0 0 0 0 0 0 0 38411 3641 34250 320134;320135 253549 253549 1 NPSIAVPIVLK Unmodified 1149.7121 0.71214483 3994 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 83.273 82.156 2 1.8593E-06 102824 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.64 106.49 890600000 94592000 317330000 8719400 16918000 20888000 33457000 30348000 34153000 25529000 48889000 49718000 50818000 22847000 58300000 78095000 38412 3994 34251 320136;320137;320138;320139;320140;320141;320142;320143;320144;320145;320146;320147;320148;320149;320150;320151 253550;253551;253552;253553;253554;253555;253556;253557;253558;253559;253560;253561;253562;253563;253564;253565 253553 15 NPSINQILLSPEK Unmodified 1451.7984 0.79839365 2460 Q14997 PSME4 Proteasome activator complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 6.71 3.81 2 1 4 2 1 1 1 1 1 79.723 78.287 2 1.7832E-13 97223 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 157.74 127.3 237700000 0 211410000 3375000 0 0 4604100 0 0 0 4239600 0 0 0 3822500 10253000 38413 2460 34252 320152;320153;320154;320155;320156;320157;320158 253566;253567;253568;253569 253566 4 NPSLRAQGGQTQSPTK Unmodified 1668.8543 0.8543454 1408 P40123 CAP2 Adenylyl cyclase-associated protein 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 21.265 17.46 3 0.030999 24899 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.724 28.097 99842000 96728000 0 3113900 0 0 0 0 0 0 0 0 0 0 0 0 38414 1408 34253 320159;320160 253570 253570 0 NPSPASSSHAVLDEK Unmodified 1537.7372 0.73724996 4997 Q9ULJ3 ZBTB21 Zinc finger and BTB domain-containing protein 21 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.28 3.23 3 1 14 3 1 1 1 1 1 1 2 1 1 2 1 1 1 28.749 27.994 2;3 7.2229E-05 30378 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 58.723 46.097 291470000 0 50964000 3292000 9324800 21289000 17718000 13638000 11371000 25257000 20739000 21571000 42567000 19476000 14616000 19648000 38415 4997 34254 320161;320162;320163;320164;320165;320166;320167;320168;320169;320170;320171;320172;320173;320174;320175;320176;320177;320178 253571;253572;253573;253574;253575;253576;253577;253578;253579;253580;253581;253582;253583;253584;253585;253586 253585 14 NPSPTTRPVSR Unmodified 1210.6418 0.64183343 5007 Q9ULV3 CIZ1 Cip1-interacting zinc finger protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 12.696 12.821 3 0.039296 11650 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 28.327 14.318 55117000 0 0 0 3151800 4133500 5137500 5164600 5483900 3439400 6227800 0 5080400 7327700 3840900 6129300 38416 5007 34255 320179;320180;320181;320182;320183;320184;320185;320186;320187;320188;320189 253587 253587 1 NPSSAAPVQSR Unmodified 1112.5574 0.5574351 242 O15027 SEC16A Protein transport protein Sec16A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.435 13.594 2 2.7879E-05 12615 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 119.53 97.004 261250000 0 0 0 12794000 13607000 18239000 17230000 15366000 12773000 25571000 27416000 32221000 28342000 20797000 36897000 38417 242 34256 320190;320191;320192;320193;320194;320195;320196;320197;320198;320199;320200;320201 253588;253589;253590;253591;253592;253593;253594;253595;253596;253597;253598;253599 253597 12 NPSSLFSK Unmodified 878.44978 0.44978213 4302 Q9GZR7 DDX24 ATP-dependent RNA helicase DDX24 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8 3.46 3 9 1 1 1 1 1 1 1 1 1 1 1 1 39.832 38.609 2 0.017811 52628 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.752 62.79 147650000 39671000 43055000 4189900 4197600 4489500 6551200 0 4308400 0 5963200 7316000 0 9153100 7724600 11026000 38418 4302 34257 320202;320203;320204;320205;320206;320207;320208;320209;320210;320211;320212;320213 253600;253601;253602 253600 3 NPSSSVPPPSAGSVK Unmodified 1409.7151 0.71505795 3573 Q8WWI1 LMO7 LIM domain only protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 2 1 1 1 1 1 1 1 1 1 1 1 30.937 31.085 2 1.5732E-05 33453 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 93.839 82.476 121460000 0 0 0 18538000 6489800 12092000 7052900 7462100 7522300 9795100 9869900 17201000 7526400 7675900 10233000 38419 3573 34258 320214;320215;320216;320217;320218;320219;320220;320221;320222;320223;320224;320225;320226 253603;253604;253605;253606;253607;253608;253609;253610 253608 5 NPSTNFQEPVQPLTQQQVAQMQLK Oxidation (M) 2769.3756 0.37557791 1093 P19623 SRM Spermidine synthase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.64 2.9 1 1 9 2 1 1 1 1 1 1 1 1 1 75.288 74.606 3 9.646E-39 88245 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 115.39 109.67 286460000 0 205620000 0 4799600 0 7983400 5380700 0 0 7809200 10306000 10601000 3732700 8507100 21721000 38420 1093 34259 320227;320228;320229;320230;320231;320232;320233;320234;320235;320236;320237 253611;253612;253613;253614 253613 1569 4 NPSTNFQEPVQPLTQQQVAQMQLK Unmodified 2753.3807 0.38066329 1093 P19623 SRM Spermidine synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.12 3.89 3 1 4 1 3 1 1 1 1 82.431 79.904 2;3 1.2588E-261 99000 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 328.02 317.96 1194900000 10988000 1132700000 0 0 0 0 0 0 0 0 8380900 5311500 0 6877800 30611000 38421 1093 34259 320238;320239;320240;320241;320242;320243;320244;320245 253615;253616;253617;253618;253619;253620;253621;253622 253616 8 NPSTSLGPTLEPEEVVNR Unmodified 1937.9694 0.96943474 3401 Q8NBQ5 HSD17B11 Estradiol 17-beta-dehydrogenase 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 2 1 1 1 1 2 1 1 1 73.929 74.01 2;3 6.3392E-48 85583 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 203.87 186.5 1236600000 0 0 0 32892000 42808000 73202000 281610000 39989000 32177000 47352000 59157000 483980000 42989000 44965000 55462000 38422 3401 34260 320246;320247;320248;320249;320250;320251;320252;320253;320254;320255;320256;320257;320258;320259 253623;253624;253625;253626;253627;253628;253629;253630;253631;253632;253633;253634;253635;253636 253635 14 NPSTVEAFDLAQSNSEHSR Unmodified 2087.9508 0.95082456 248 O15067 PFAS Phosphoribosylformylglycinamidine synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 2 59.874 60.219 2;3 2.5539E-38 67795 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 113.05 103.36 166690000 0 0 0 0 0 0 0 10353000 0 11761000 28450000 19681000 9161300 22298000 64984000 38423 248 34261 320260;320261;320262;320263;320264;320265;320266;320267 253637;253638;253639;253640;253641;253642 253640 6 NPSVNWK Unmodified 843.4239 0.42390173 1754 P55060 CSE1L Exportin-2 yes yes 0 0 0 By MS/MS By MS/MS By matching 2 0 3 1 1 1 35.456 30.595 2 0.034035 40182 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.359 66.675 1166700000 455470000 673230000 37997000 0 0 0 0 0 0 0 0 0 0 0 0 38424 1754 34262 320268;320269;320270 253643 253643 1 NPTASAAPLGTTLAVQAVPTAHSIVQATR Unmodified 2842.5301 0.53010472 2986 Q6VMQ6 ATF7IP Activating transcription factor 7-interacting protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 83.694 83.885 3 1.0899E-20 96775 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.779 59.009 6817600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6817600 38425 2986 34263 320271 253644 253644 1 NPTFLDYVRPR Unmodified 1376.7201 0.72008375 1360 P35610 SOAT1 Sterol O-acyltransferase 1 yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 74.95 75.065 3 0.0154 86544 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 41.704 33.105 17189000 0 0 0 0 0 4332300 0 3315600 4752700 0 0 0 2102400 2686600 0 38426 1360 34264 320272;320273;320274;320275;320276 253645 253645 1 NPTIVNFPITNVDLR Unmodified 1711.9257 0.92571943 2702 Q53GS9 USP39 U4/U6.U5 tri-snRNP-associated protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 88.739 88.848 2 8.0339E-23 103170 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 119.76 98.534 48292000 0 0 0 0 1603200 3406300 1906100 3003000 2557100 5940900 5611800 5563200 2469100 4164300 12067000 38427 2702 34265 320277;320278;320279;320280;320281;320282;320283;320284;320285;320286;320287 253646;253647;253648;253649;253650;253651;253652;253653;253654;253655;253656;253657 253648 12 NPTLFIFAENDVVIPLK Unmodified 1929.0612 0.061150279 3796 Q96DG6 CMBL Carboxymethylenebutenolidase homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 1 3 1 99.615 95.869 2 0.00062494 114820 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 90.614 80.425 58397000 24896000 31499000 2003200 0 0 0 0 0 0 0 0 0 0 0 0 38428 3796 34266 320288;320289;320290;320291;320292 253658;253659;253660;253661 253660 4 NPTPAYLDLLK Unmodified 1243.6812 0.68123863 485 O75362 ZNF217 Zinc finger protein 217 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 83.092 83.127 2 0.0037736 96246 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 74.841 44.277 47991000 0 0 0 2476400 3117300 5402900 3809800 4805100 4895800 8175300 9947300 0 5361600 0 0 38429 485 34267 320293;320294;320295;320296;320297;320298;320299;320300;320301 253662;253663;253664;253665;253666;253667;253668 253663 7 NPVDYIQGLLDLK Unmodified 1486.8031 0.80314468 2330 Q13618 CUL3 Cullin-3 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 99.529 91.399 2 0.0037491 117461 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.05 88.928 3939700 3939700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38430 2330 34268 320302;320303 253669;253670 253669 2 NPVESAMELK Unmodified 1116.5485 0.5485099 4448 Q9H8E8 CSRP2BP Cysteine-rich protein 2-binding protein yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 55.442 55.377 2 0.030285 63530 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 43.083 9.5325 7333800 0 0 0 0 1977300 0 0 1126600 0 4229900 0 0 0 0 0 38431 4448 34269 320304;320305;320306;320307 253671;253672 253672 2 NPVFDDEEK Unmodified 1091.4771 0.47711909 4760 Q9NZ52 GGA3 ADP-ribosylation factor-binding protein GGA3 yes yes 0 0 0 By MS/MS 2 0 1 1 34.232 29.589 2 0.0076989 38567 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.7 88.332 57463000 0 57463000 0 0 0 0 0 0 0 0 0 0 0 0 0 38432 4760 34270 320308 253673 253673 1 NPVIAQK Unmodified 768.44939 0.4493882 1313 P31948 STIP1 Stress-induced-phosphoprotein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.33 3.79 1 4 1 12 4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19.678 19.074 2 0.015481 94147 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 119.22 78.301 4457700000 310210000 3871400000 49666000 5011900 3963400 3616900 7153000 3300000 3555800 8792100 32562000 38871000 6770000 19539000 93251000 38433 1313 34271 320309;320310;320311;320312;320313;320314;320315;320316;320317;320318;320319;320320;320321;320322;320323;320324;320325;320326 253674;253675;253676;253677;253678;253679;253680;253681 253677 8 NPVMELNEK Oxidation (M) 1088.5172 0.51720977 2207;3991 Q12906;Q96SI9 ILF3;STRBP Interleukin enhancer-binding factor 3;Spermatid perinuclear RNA-binding protein no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.91 3.42 4 2 16 4 2 2 2 2 2 1 1 1 1 1 2 1 29.37 28.229 2 0.00080389 35794 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 143.37 117.43 422110000 0 250140000 5716700 13205000 19819000 27352000 21332000 4821000 7308400 14074000 0 15057000 29160000 0 14130000 38434 2207;3991 34272 320327;320328;320329;320330;320331;320332;320333;320334;320335;320336;320337;320338;320339;320340;320341;320342;320343;320344;320345;320346;320347;320348 253682;253683;253684;253685;253686;253687;253688;253689;253690;253691;253692;253693;253694;253695;253696;253697;253698 253686 3594 15 NPVMELNEK Unmodified 1072.5223 0.52229515 2207;3991 Q12906;Q96SI9 ILF3;STRBP Interleukin enhancer-binding factor 3;Spermatid perinuclear RNA-binding protein no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.87 3.54 4 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 41.785 40.492 1;2 3.9469E-07 51826 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 182.76 154.25 1542000000 15005000 1112500000 5667700 29394000 22693000 40565000 29284000 0 18981000 37763000 37851000 41777000 45362000 37504000 67660000 38435 2207;3991 34272 320349;320350;320351;320352;320353;320354;320355;320356;320357;320358;320359;320360;320361;320362;320363 253699;253700;253701;253702;253703;253704;253705;253706;253707;253708;253709;253710;253711;253712 253703 14 NPVQCYEK Unmodified 1036.4648 0.46478027 3839 Q96FV9 THOC1 THO complex subunit 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 20.939 21.185 2 0.047334 20771 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 47.869 28.165 35711000 0 0 0 0 1588000 0 2389400 0 5631100 3739900 0 4392200 5646100 5208000 7116000 38436 3839 34273 320364;320365;320366;320367;320368;320369;320370;320371 253713 253713 1 NPVSAGGSSAPPPK Unmodified 1264.6412 0.64116473 4999 Q9ULL5 PRR12 Proline-rich protein 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 18.408 18.606 2 0.00057375 17662 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.595 48.776 28982000 0 0 0 2256500 2388900 2705300 2210500 2258200 0 2753700 1899900 3814900 2382600 2037000 4274400 38437 4999 34274 320372;320373;320374;320375;320376;320377;320378;320379;320380;320381;320382 253714;253715;253716;253717;253718;253719 253715 4 NPVSDHFPVGCMK Unmodified 1486.6697 0.66970444 3694 Q92979 EMG1 Ribosomal RNA small subunit methyltransferase NEP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 66.022 59.455 2;3 6.6237E-20 79699 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 158.08 137.11 328960000 220640000 86118000 22205000 0 0 0 0 0 0 0 0 0 0 0 0 38438 3694 34275 320383;320384;320385;320386 253720;253721;253722;253723 253722 2 NPVSDHFPVGCMK Oxidation (M) 1502.6646 0.66461906 3694 Q92979 EMG1 Ribosomal RNA small subunit methyltransferase NEP1 yes yes 0 1 0 By MS/MS By matching 2 0 2 1 1 53.048 47.033 2 2.5753E-22 64402 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 149.49 131.98 36662000 28468000 0 8194000 0 0 0 0 0 0 0 0 0 0 0 0 38439 3694 34275 320387;320388 253724 253724 5262 1 NPVSESIFMLAGPDLK Oxidation (M) 1732.8706 0.87057232 4728 Q9NXN4 GDAP2 Ganglioside-induced differentiation-associated protein 2 yes yes 0 1 0 By matching By MS/MS 2 0 2 1 1 94.433 89.131 2 0.0010562 107771 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 66.498 59.566 16640000 14161000 0 2479100 0 0 0 0 0 0 0 0 0 0 0 0 38440 4728 34276 320389;320390 253725 253725 6108 1 NPVSLPSLPNPTK Unmodified 1362.7507 0.75071518 2986 Q6VMQ6 ATF7IP Activating transcription factor 7-interacting protein 1 yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 76.064 76.101 2 0.01126 87084 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 48.998 44.386 28832000 0 0 0 2889100 0 4128200 3526500 0 0 5249400 0 0 3110600 3744400 6183300 38441 2986 34277 320391;320392;320393;320394;320395;320396;320397 253726 253726 1 NPVTAVPVVLK Unmodified 1135.6965 0.69649476 473 O75182 SIN3B Paired amphipathic helix protein Sin3b yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 73.802 72.683 2 0.010255 83478 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 49.715 38.85 84799000 6337800 31648000 0 2990300 3111500 4831900 3015100 2239400 2751400 4642600 5881700 6466700 0 4172500 6709800 38442 473 34278 320398;320399;320400;320401;320402;320403;320404;320405;320406;320407;320408;320409;320410;320411 253727;253728;253729;253730;253731;253732 253730 6 NPVTSTYSK Unmodified 995.49238 0.49237523 2238 Q13131 PRKAA1 5'-AMP-activated protein kinase catalytic subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching 8 3.46 3 9 1 1 1 1 1 1 1 1 1 1 1 1 18.721 17.911 2 0.0020148 22479 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.06 65.577 175970000 4129500 120460000 2643000 3993400 4533500 8023800 5786900 0 5813400 7188900 4192600 4228000 0 0 4976600 38443 2238 34279 320412;320413;320414;320415;320416;320417;320418;320419;320420;320421;320422;320423 253733;253734;253735;253736;253737 253734 5 NPWGEVEWTGR Unmodified 1329.6102 0.61019895 1057 P17655 CAPN2 Calpain-2 catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 72.634 73.004 2 0.0096925 84144 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 68.557 49.463 8993000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8993000 38444 1057 34280 320424;320425 253738;253739 253738 2 NPWQEYNYLQK Unmodified 1481.6939 0.69392858 2005 P83436 COG7 Conserved oligomeric Golgi complex subunit 7 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 74.369 71.417 2 0.0011844 87276 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 91.069 73.204 3320200 0 0 3320200 0 0 0 0 0 0 0 0 0 0 0 0 38445 2005 34281 320426;320427 253740;253741 253741 2 NPWSMDENLMHISYEAGILENPK Oxidation (M) 2703.2309 0.23088751 737 P00966 ASS1 Argininosuccinate synthase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 2 4 1 93.155 87.931 3 1.2104E-81 113509 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 144.5 131.83 312180000 163240000 144930000 4008900 0 0 0 0 0 0 0 0 0 0 0 0 38446 737 34282 320428;320429;320430;320431;320432;320433;320434 253742;253743;253744;253745;253746;253747;253748;253749 253744 901;902 8 NPWSMDENLMHISYEAGILENPK Unmodified 2687.236 0.23597289 737 P00966 ASS1 Argininosuccinate synthase yes yes 0 0 0 By MS/MS By MS/MS 2.2 0.748 1 2 2 3 2 98.942 96.062 3 5.7398E-103 114861 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 158.77 146.23 366830000 292750000 74087000 0 0 0 0 0 0 0 0 0 0 0 0 0 38447 737 34282 320435;320436;320437;320438;320439 253750;253751;253752;253753;253754 253754 5 NPWSMDENLMHISYEAGILENPK 2 Oxidation (M) 2719.2258 0.22580213 737 P00966 ASS1 Argininosuccinate synthase yes yes 0 2 0 By MS/MS By MS/MS By MS/MS 2 0 4 1 2 1 86.902 81.865 3 1.683E-15 104301 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.193 83.241 220760000 59755000 139150000 21851000 0 0 0 0 0 0 0 0 0 0 0 0 38448 737 34282 320440;320441;320442;320443 253755;253756;253757;253758 253757 901;902 3 NPYYGGESASITPLEDLYK Unmodified 2116.0001 6.61646E-05 1620 P50395 GDI2 Rab GDP dissociation inhibitor beta yes yes 0 0 0 By MS/MS 10 0 1 1 84.761 84.939 2 4.3991E-08 98071 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 103.85 73.025 8578500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8578500 38449 1620 34283 320444 253759 253759 1 NQAAIQGRPPYAASAEEVAK Unmodified 2070.0494 0.049416394 4762 Q9NZB2 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 49.534 49.153 3 0.0032731 55263 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 34.689 25.87 216170000 0 42792000 0 8631400 14562000 0 10305000 10009000 24825000 10082000 20711000 32166000 23253000 0 18839000 38450 4762 34284 320445;320446;320447;320448;320449;320450;320451;320452;320453;320454;320455 253760;253761;253762;253763;253764;253765;253766;253767 253763 8 NQAAQAAKPEDPR Unmodified 1394.6902 0.69024019 4755 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 11.412 11.51 3 0.042588 9262 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 27.33 8.23 5422500 0 0 0 0 0 2248900 0 0 0 0 0 0 0 3173600 0 38451 4755 34285 320456;320457 253768;253769 253769 1 NQAETIALEK Unmodified 1115.5823 0.58225287 1406;2357 P39880;Q13948 CUX1 Homeobox protein cut-like 1;Protein CASP no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.47 37.651 2 0.0035261 40402 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 76.17 39.011 258500000 0 0 0 16044000 18674000 18733000 20736000 23616000 15009000 20537000 28828000 20961000 28080000 23833000 23453000 38452 1406;2357 34286 320458;320459;320460;320461;320462;320463;320464;320465;320466;320467;320468;320469 253770;253771;253772;253773;253774;253775;253776;253777;253778;253779;253780 253777 10 NQAHSVLK Unmodified 895.48756 0.48756462 3631 Q92576 PHF3 PHD finger protein 3 yes yes 0 0 0 By MS/MS 2 0 1 1 9.4972 6.2424 2 0.025436 8968 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.165 28.378 23313000 0 23313000 0 0 0 0 0 0 0 0 0 0 0 0 0 38453 3631 34287 320470 253781 253781 1 NQAIEELEK Unmodified 1072.5401 0.5400537 4811 Q9P289 STK26 Serine/threonine-protein kinase 26 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 38.04 38.158 2 0.003643 40939 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.38 37.501 537630000 0 0 0 44980000 49561000 75931000 54380000 58547000 32516000 57231000 0 89297000 0 0 75186000 38454 4811 34288 320471;320472;320473;320474;320475;320476;320477;320478;320479 253782;253783;253784;253785;253786;253787;253788;253789;253790 253785 7 NQALFPACVLK Unmodified 1259.6696 0.66962808 3608 Q92499 DDX1 ATP-dependent RNA helicase DDX1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 79.898 79.019 2 0.00043804 100619 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.01 79.125 263290000 80217000 5385000 4160800 8906500 9144200 11305000 10394000 8591900 13075000 13747000 14827000 30184000 16554000 12023000 24779000 38455 3608 34289 320480;320481;320482;320483;320484;320485;320486;320487;320488;320489;320490;320491;320492;320493;320494;320495 253791;253792;253793;253794;253795;253796;253797;253798;253799;253800;253801;253802;253803;253804;253805;253806;253807;253808;253809 253799 19 NQALNIAWQK Unmodified 1184.6302 0.63020611 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 62.088 61.543 2 1.0109E-10 82269 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 166.45 151.07 327310000 134810000 0 0 7356400 8065200 15602000 11669000 12384000 10943000 18291000 22912000 19808000 14161000 16770000 34538000 38456 643 34290 320496;320497;320498;320499;320500;320501;320502;320503;320504;320505;320506;320507;320508 253810;253811;253812;253813;253814;253815;253816;253817;253818;253819;253820;253821;253822;253823;253824 253818 13 NQALNTDNYGHDLASVQALQR Unmodified 2327.1254 0.12543488 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.528 71.596 3 3.0286E-62 81822 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 136.58 131.58 169260000 0 0 0 2716600 3446100 13451000 7255200 8037100 7255300 17874000 25122000 18365000 7234600 15461000 43044000 38457 2344 34291 320509;320510;320511;320512;320513;320514;320515;320516;320517;320518;320519;320520 253825;253826;253827;253828;253829;253830;253831;253832;253833;253834;253835;253836;253837;253838;253839 253829 15 NQALNTDNYGHDLASVQALQRK Unmodified 2455.2204 0.2203979 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 74.327 67.188 3;4 9.6153E-32 87628 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 114.72 107.62 248050000 212130000 35920000 0 0 0 0 0 0 0 0 0 0 0 0 0 38458 2344 34292 320521;320522;320523 253840;253841;253842 253841 3 NQAPPGLYTK Unmodified 1087.5662 0.56620887 737 P00966 ASS1 Argininosuccinate synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.62 3.92 1 6 2 12 3 4 2 1 1 1 1 1 1 1 1 1 1 1 1 38.454 37.128 2 0.0019539 36784 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 97.431 75.299 9820200000 650660000 7559100000 129040000 32611000 32766000 57509000 51311000 44209000 0 62592000 272020000 178280000 62747000 158040000 529380000 38459 737 34293 320524;320525;320526;320527;320528;320529;320530;320531;320532;320533;320534;320535;320536;320537;320538;320539;320540;320541;320542;320543;320544 253843;253844;253845;253846;253847;253848;253849;253850;253851;253852;253853;253854;253855;253856;253857;253858;253859;253860;253861;253862;253863;253864;253865;253866;253867;253868;253869;253870;253871;253872;253873 253863 31 NQAVNFLR Unmodified 960.51411 0.51411372 3062 Q7LBR1 CHMP1B Charged multivesicular body protein 1b yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 51.777 51.487 2 0.02509 58925 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 58.981 34.795 14669000 0 0 0 9247400 0 0 5421400 0 0 0 0 0 0 0 0 38460 3062 34294 320545;320546 253874;253875;253876 253875 3 NQCTQVVQER Unmodified 1260.5881 0.5880833 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.179 18.367 2 0.001711 17316 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 104.2 62.091 394330000 0 0 0 129860000 29191000 25546000 22504000 20898000 13960000 29183000 25137000 29521000 28897000 17902000 21736000 38461 1029 34295 320547;320548;320549;320550;320551;320552;320553;320554;320555;320556;320557;320558 253877;253878;253879;253880;253881;253882;253883;253884;253885;253886;253887;253888;253889 253881 13 NQCTQVVQERESLLVK Unmodified 1929.9942 0.9942097 1029 P15924 DSP Desmoplakin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS 6.8 3.92 2 3 1 1 1 1 1 59.718 57.147 3 0.00061513 65167 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 56.514 46.317 117170000 58285000 0 31410000 14261000 5182300 0 0 0 0 0 8035000 0 0 0 0 38462 1029 34296 320559;320560;320561;320562;320563 253890;253891;253892;253893;253894 253894 5 NQDAGLAQGLRK Unmodified 1269.6789 0.67894722 4927 Q9UIM3 FKBPL FK506-binding protein-like yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 32.796 28.062 3 0.024102 35384 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 39.179 30.954 21845000 14435000 0 7410800 0 0 0 0 0 0 0 0 0 0 0 0 38463 4927 34297 320564;320565 253895 253895 1 NQDATVYVGGLDEK Unmodified 1507.7155 0.71545188 2533 Q15427 SF3B4 Splicing factor 3B subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 54.647 54.778 2 4.4207E-19 62864 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 159.99 141.93 1487700000 0 0 0 75218000 116680000 110450000 176920000 139130000 80745000 113260000 128090000 191440000 109880000 114010000 131910000 38464 2533 34298 320566;320567;320568;320569;320570;320571;320572;320573;320574;320575;320576;320577 253896;253897;253898;253899;253900;253901;253902;253903;253904;253905;253906;253907;253908;253909;253910 253909 15 NQDDFECVTTLEGHENEVK Unmodified 2262.9699 0.96990502 575 O76071 CIAO1 Probable cytosolic iron-sulfur protein assembly protein CIAO1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 65.905 64.568 3 4.3719E-72 82225 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 142.58 138.13 616300000 29966000 439420000 6789800 4851600 9734200 11212000 7521600 10027000 5570400 9546900 14327000 14115000 13643000 17238000 22346000 38465 575 34299 320578;320579;320580;320581;320582;320583;320584;320585;320586;320587;320588;320589;320590;320591;320592;320593 253911;253912;253913;253914;253915;253916;253917;253918;253919;253920;253921;253922;253923;253924;253925;253926;253927;253928;253929;253930;253931;253932;253933 253916 23 NQDECIVALHDCNGDVNK Unmodified 2099.9001 0.90005132 2779 Q5T6F2 UBAP2 Ubiquitin-associated protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.55 1 1 4 2 1 1 1 1 48.853 47.096 3 1.1436E-10 60807 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.475 85.039 54159000 0 27472000 0 0 5262000 0 5066800 0 5309700 0 11048000 0 0 0 0 38466 2779 34300 320594;320595;320596;320597;320598;320599 253934;253935;253936;253937;253938;253939;253940;253941 253936 8 NQDECVIALHDCNGDVNR Unmodified 2127.9062 0.90619933 2380 Q14157 UBAP2L Ubiquitin-associated protein 2-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 2 1 1 1 1 1 2 2 2 2 2 48.246 48.462 2;3 2.3145E-26 54586 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 106.94 98.126 870460000 0 0 0 39415000 36718000 57842000 59643000 67329000 56515000 57844000 94029000 110690000 60275000 68964000 161190000 38467 2380 34301 320600;320601;320602;320603;320604;320605;320606;320607;320608;320609;320610;320611;320612;320613;320614;320615;320616;320617 253942;253943;253944;253945;253946;253947;253948;253949;253950;253951;253952;253953;253954;253955 253951 14 NQDEESQEAPELLK Unmodified 1628.753 0.7529596 3421 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 50.935 50.295 2 2.7119E-136 57284 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 217.14 197.37 466480000 0 56923000 0 31590000 0 35427000 42215000 19139000 27372000 31787000 57401000 42902000 41907000 25519000 54298000 38468 3421 34302 320618;320619;320620;320621;320622;320623;320624;320625;320626;320627;320628;320629;320630 253956;253957;253958;253959;253960;253961;253962;253963;253964;253965;253966;253967;253968;253969 253964 13 NQDFSSFDDTGK Unmodified 1359.5579 0.55788861 3460 Q8NHV4 NEDD1 Protein NEDD1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 43.721 43.362 2 2.2979E-05 48671 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 102.52 97.042 134320000 0 35220000 0 4717700 5043100 9911600 6020400 6815500 0 7204000 11215000 19319000 0 10719000 18139000 38469 3460 34303 320631;320632;320633;320634;320635;320636;320637;320638;320639;320640;320641;320642;320643 253970;253971;253972;253973;253974;253975;253976;253977;253978;253979;253980;253981;253982;253983;253984 253973 15 NQDGEINRNIMEETER Unmodified 1946.8752 0.87521678 3414 Q8ND24 RNF214 RING finger protein 214 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 47.074 47.276 3 0.039048 53081 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 26.146 15.661 37138000 0 0 0 0 3181200 0 4273500 0 3639600 6059300 6679400 4585100 4818600 3901600 0 38470 3414 34304 320644;320645;320646;320647;320648;320649;320650;320651 253985 253985 1 NQDLALSNLESIPGGYNALR Unmodified 2144.0862 0.08619583 4899 Q9UHD9 UBQLN2 Ubiquilin-2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 86.795 86.954 2 1.6414E-58 100511 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 128.9 118.58 6166000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6166000 38471 4899 34305 320652;320653 253986;253987 253986 2 NQDLALSNLESIPGGYNALRR Unmodified 2300.1873 0.18730686 4899 Q9UHD9 UBQLN2 Ubiquilin-2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 82.629 82.785 3 5.6315E-08 95631 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.992 38.188 93693000 0 0 0 0 0 0 0 0 3125100 10475000 6019100 3448300 0 4844600 65781000 38472 4899 34306 320654;320655;320656;320657;320658;320659 253988;253989;253990;253991 253989 4 NQDLAPNSAEQASILSLVTK Unmodified 2098.0906 0.090612506 2206 Q12905 ILF2 Interleukin enhancer-binding factor 2 yes yes 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 88.685 88.793 2 1.5508E-05 103009 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 70.412 62.868 7449400 0 0 0 0 0 0 0 0 0 3128600 0 2870100 1450700 0 0 38473 2206 34307 320660;320661;320662 253992 253992 1 NQDLEFER Unmodified 1049.4778 0.47778779 1126 P21399 ACO1 Cytoplasmic aconitate hydratase yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 37.958 38.076 2 0.033519 40960 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.629 69.731 43959000 0 0 0 1532500 1617800 0 0 2254800 0 0 10477000 0 0 7516000 20561000 38474 1126 34308 320663;320664;320665;320666;320667;320668 253993 253993 0 NQDNLQGWNK Unmodified 1215.5632 0.56324876 1268 P30085 CMPK1 UMP-CMP kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 33.648 33.878 2 0.0014814 37226 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 92.439 60.505 111410000 0 0 0 0 3708800 5493800 5035300 5042600 3340800 9201900 19664000 16643000 0 9041000 34237000 38475 1268 34309 320669;320670;320671;320672;320673;320674;320675;320676;320677;320678;320679 253994;253995;253996;253997;253998;253999;254000;254001;254002;254003 253994 10 NQDNPVIDEIDFLEAFK Unmodified 2005.9633 0.96328673 4196 Q9BVQ7 SPATA5L1 Spermatogenesis-associated protein 5-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 101.27 94.844 3 0.0064905 119607 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 24.367 18.824 9999200 4080200 5919000 0 0 0 0 0 0 0 0 0 0 0 0 0 38476 4196 34310 320680;320681 254004;254005 254004 2 NQDRSALK Unmodified 930.48829 0.4882929 3844 Q96G03 PGM2 Phosphoglucomutase-2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 5.5823 2.2734 2 0.033311 4178 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.71 54.273 189370000 116810000 72558000 0 0 0 0 0 0 0 0 0 0 0 0 0 38477 3844 34311 320682;320683 254006 254006 0 NQDSVVNGTEAEVK Unmodified 1488.7056 0.70561548 371 O43815 STRN Striatin yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 34.56 34.652 2 1.161E-12 36989 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.06 80.541 38608000 0 0 0 5219000 3737500 0 4888700 0 0 0 0 0 7813300 6369800 10580000 38478 371 34312 320684;320685;320686;320687;320688;320689 254007;254008;254009 254007 3 NQDTEDALLTADSAQTK Unmodified 1819.8436 0.84356552 485 O75362 ZNF217 Zinc finger protein 217 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 2 1 1 53.1 53.092 2 2.777E-41 59924 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 174.65 161.67 55195000 0 0 0 3134700 2201200 7639500 5096100 3981800 8880800 8929500 0 0 7003900 8327200 0 38479 485 34313 320690;320691;320692;320693;320694;320695;320696;320697;320698;320699 254010;254011;254012;254013;254014;254015;254016;254017;254018 254016 9 NQDVSISNVQPK Unmodified 1327.6732 0.67319314 3823 Q96EV2 RBM33 RNA-binding protein 33 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.496 39.675 2 2.1052E-05 44173 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 123.75 103.46 265170000 0 0 0 16447000 19018000 16279000 20084000 17432000 17085000 20908000 32441000 30813000 22109000 19093000 33459000 38480 3823 34314 320700;320701;320702;320703;320704;320705;320706;320707;320708;320709;320710;320711 254019;254020;254021;254022;254023;254024;254025;254026;254027;254028;254029;254030;254031;254032 254022 14 NQEADVQEVK Unmodified 1158.5517 0.55168102 2838 Q63HN8 RNF213 E3 ubiquitin-protein ligase RNF213 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 17.918 18.26 2 0.0016114 18679 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 89.886 54.448 21082000 0 0 0 0 0 2418300 0 0 0 2766100 2860700 4950200 0 1599800 6486900 38481 2838 34315 320712;320713;320714;320715;320716;320717;320718 254033;254034;254035;254036;254037;254038;254039 254033 7 NQEDIILFR Unmodified 1146.6033 0.60332266 4267 Q9BZI7 UPF3B Regulator of nonsense transcripts 3B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 75.841 75.917 2 0.0099322 87648 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 75.109 44.422 72217000 0 0 0 0 7133600 14595000 8025400 0 7444300 10198000 11996000 12825000 0 0 0 38482 4267 34316 320719;320720;320721;320722;320723;320724;320725 254040;254041;254042;254043;254044;254045;254046 254040 7 NQEDLLSEFGQFLPDANSSVLLSK Unmodified 2650.3126 0.31262653 3994 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 100.24 95.963 2;3 4.1434E-122 118550 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 219.79 205.93 107840000 0 107840000 0 0 0 0 0 0 0 0 0 0 0 0 0 38483 3994 34317 320726;320727;320728 254047;254048;254049;254050 254049 4 NQEDNTGKYPDIISR Unmodified 1748.8329 0.83294126 1081 P18858 LIG1 DNA ligase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 46.512 46.691 3 0.001817 52445 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 46.66 40.628 80257000 0 0 0 5673000 5587900 0 9182900 6059900 0 6350800 10545000 12746000 6461900 5185000 12465000 38484 1081 34318 320729;320730;320731;320732;320733;320734;320735;320736;320737;320738 254051;254052;254053;254054 254052 4 NQEDTFAAELHR Unmodified 1429.6586 0.65860571 4881 Q9UGJ1 TUBGCP4 Gamma-tubulin complex component 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 49.567 49.641 3 0.003578 54999 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.616 38.583 147150000 0 0 0 15341000 10274000 19140000 14767000 0 13746000 22798000 19839000 0 0 12281000 18967000 38485 4881 34319 320739;320740;320741;320742;320743;320744;320745;320746;320747 254055;254056;254057 254056 3 NQEDTFAAELHRLK Unmodified 1670.8376 0.8376327 4881 Q9UGJ1 TUBGCP4 Gamma-tubulin complex component 4 yes yes 0 0 1 By MS/MS 2 0 1 1 75.582 67.451 4 0.014615 89105 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.115 34.169 4393500 4393500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38486 4881 34320 320748 254058 254058 1 NQEFVSSSR Unmodified 1052.4887 0.48868683 2649 Q2KHR3 QSER1 Glutamine and serine-rich protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.583 18.781 2 0.013016 18883 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 60.436 42.401 44741000 0 0 0 3156300 3299400 3289200 3431100 2467800 2607500 3885100 4259800 5148100 3465600 2861700 6869100 38487 2649 34321 320749;320750;320751;320752;320753;320754;320755;320756;320757;320758;320759;320760 254059;254060;254061;254062;254063;254064 254061 6 NQEKLAK Unmodified 829.46577 0.46576654 3900 Q96K17 BTF3L4 Transcription factor BTF3 homolog 4 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 79.363 75.321 1 0.049623 93815 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.43 4.1435 80175000 0 80175000 0 0 0 0 0 0 0 0 0 0 0 0 0 38488 3900 34322 320761;320762 254065 254065 0 NQELEVVR Unmodified 985.51926 0.51925868 2391 Q14203 DCTN1 Dynactin subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 35.013 35.168 2 0.01524 38174 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 69.198 2.9276 192300000 0 0 0 8520900 0 37892000 25438000 0 2527000 37826000 31554000 0 0 0 48540000 38489 2391 34323 320763;320764;320765;320766;320767;320768;320769 254066;254067;254068;254069 254069 4 NQELRQVK Unmodified 1013.5618 0.56179219 149;409 O00410;O60518 IPO5;RANBP6 Importin-5;Ran-binding protein 6 no no 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 12.125 8.8918 2 0.025186 11240 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 118.74 30.989 1665200000 921430000 280550000 463180000 0 0 0 0 0 0 0 0 0 0 0 0 38490 149;409 34324 320770;320771;320772;320773 254070;254071;254072;254073 254073 1 NQEQLAAELAEFTAK Unmodified 1661.8261 0.82606496 1345 P35241 RDX Radixin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.05 3.96 9 1 10 3 5 2 2 2 2 2 2 87.877 85.795 2;3 2.7182E-56 107790 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 169.55 146.87 2350100000 65406000 2150000000 37593000 0 0 0 0 0 0 4512200 14276000 15087000 0 9325800 53878000 38491 1345 34325 320774;320775;320776;320777;320778;320779;320780;320781;320782;320783;320784;320785;320786;320787;320788;320789;320790;320791;320792;320793 254074;254075;254076;254077;254078;254079;254080;254081;254082;254083;254084;254085;254086;254087;254088;254089;254090;254091;254092;254093 254076 18 NQEQMKPLEEK Oxidation (M) 1388.6606 0.66057954 1875 P62191 PSMC1 26S protease regulatory subunit 4 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 9.2877 9.397 3 0.0089242 7599 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 40.449 32.994 61739000 0 0 0 8316400 8580700 4339100 4641600 0 1587900 6043300 0 17523000 3318100 2684100 4705000 38492 1875 34326 320794;320795;320796;320797;320798;320799;320800;320801;320802;320803 254094 254094 3033 1 NQESSFEAVK Unmodified 1137.5302 0.5302173 3289 Q8IYW5 RNF168 E3 ubiquitin-protein ligase RNF168 yes yes 0 0 0 By MS/MS 10 0 1 1 28.668 29.136 2 0.018619 31250 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 57.59 29.416 5604600 0 0 0 0 0 0 0 0 0 0 5604600 0 0 0 0 38493 3289 34327 320804 254095 254095 1 NQEVTIK Unmodified 830.44978 0.44978213 1406;2357 P39880;Q13948 CUX1 Homeobox protein cut-like 1;Protein CASP no no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 16.513 16.685 2 0.023433 16577 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 85.359 16.875 89291000 0 0 0 3521700 4859600 7899700 8260300 6816800 5427300 7676800 7985900 12222000 0 10193000 14428000 38494 1406;2357 34328 320805;320806;320807;320808;320809;320810;320811;320812;320813;320814;320815 254096 254096 1 NQFETEINITK Unmodified 1335.667 0.66704513 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 62.351 61.988 2 2.1067E-05 70969 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 123.63 81.516 310370000 0 111990000 0 17543000 12389000 12634000 18077000 34285000 10608000 13018000 16768000 21855000 21299000 8365400 11537000 38495 1029 34329 320816;320817;320818;320819;320820;320821;320822;320823;320824;320825;320826;320827;320828 254097;254098;254099;254100;254101;254102;254103;254104;254105;254106;254107;254108;254109;254110;254111 254106 15 NQFPHDSEIIR Unmodified 1354.663 0.6629628 4979 Q9UKY1 ZHX1 Zinc fingers and homeoboxes protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.074 45.244 3 0.010663 50873 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 36.303 30.583 185600000 0 0 0 13996000 10790000 20258000 15739000 14398000 11857000 16540000 16832000 16448000 11997000 18557000 18188000 38496 4979 34330 320829;320830;320831;320832;320833;320834;320835;320836;320837;320838;320839;320840 254112;254113;254114;254115;254116 254114 4 NQGCQLPGSSHSFQGPNLVTGK Unmodified 2312.0968 0.096777292 4211 Q9BWH6 RPAP1 RNA polymerase II-associated protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 62.822 62.884 3 0.016473 71223 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.81 31.809 12672000 0 0 0 0 0 6622100 0 0 0 6050200 0 0 0 0 0 38497 4211 34331 320841;320842;320843 254117;254118 254118 2 NQGDEEGTEIDTLQFR Unmodified 1850.8282 0.82824981 260 O15160 POLR1C DNA-directed RNA polymerases I and III subunit RPAC1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.721 69.796 2 7.111E-98 79526 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 234.92 222.35 106890000 0 0 0 6130400 6264600 9641800 8873400 5386700 4503900 9935600 9510100 13710000 9287900 9532300 14114000 38498 260 34332 320844;320845;320846;320847;320848;320849;320850;320851;320852;320853;320854;320855 254119;254120;254121;254122;254123;254124;254125;254126;254127;254128;254129;254130 254122 12 NQGETPTTEVPAPFFLPASLSANNTPTR Unmodified 2956.4567 0.45666501 4943 Q9UJX2 CDC23 Cell division cycle protein 23 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 93.535 93.643 3 2.3912E-06 108857 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 36.3 33.522 43378000 0 0 0 0 2450000 1246700 1016900 2535200 1118500 8463700 5626800 5517400 1529500 2928600 10944000 38499 4943 34333 320856;320857;320858;320859;320860;320861;320862;320863;320864;320865;320866 254131;254132;254133;254134 254131 4 NQGETPTTEVPAPFFLPASLSANNTPTRR Unmodified 3112.5578 0.55777603 4943 Q9UJX2 CDC23 Cell division cycle protein 23 homolog yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 89.209 89.342 3 2.5597E-32 103550 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.486 74.721 33159000 0 0 0 0 0 2073800 0 2852000 0 5535500 4205600 4032700 0 2358100 12102000 38500 4943 34334 320867;320868;320869;320870;320871;320872;320873 254135;254136;254137;254138 254136 4 NQGGGLSSSGAGEGQGPK Unmodified 1586.7285 0.72847619 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.57 3.08 1 3 1 23 1 3 1 2 2 2 2 1 2 2 2 2 2 2 2 20.225 19.975 2;3 3.6998E-74 101821 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 179.8 161.54 866020000 41401000 109960000 0 34730000 23028000 65117000 39140000 29858000 32581000 61290000 64398000 93405000 47110000 75801000 148210000 38501 848 34335 320874;320875;320876;320877;320878;320879;320880;320881;320882;320883;320884;320885;320886;320887;320888;320889;320890;320891;320892;320893;320894;320895;320896;320897;320898;320899;320900;320901 254139;254140;254141;254142;254143;254144;254145;254146;254147;254148;254149;254150;254151;254152;254153;254154;254155;254156;254157;254158;254159 254154 20 NQGGGLSSSGAGEGQGPKK Unmodified 1714.8234 0.8234392 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.29 6 1 24 2 3 2 2 2 2 2 2 2 2 2 2 2 2 2 11.746 11.12 2;3 1.1661E-31 10358 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 107.75 89.015 774270000 73162000 200420000 12548000 34819000 20657000 23953000 38506000 29328000 15256000 39824000 36438000 72629000 51492000 44111000 81124000 38502 848 34336 320902;320903;320904;320905;320906;320907;320908;320909;320910;320911;320912;320913;320914;320915;320916;320917;320918;320919;320920;320921;320922;320923;320924;320925;320926;320927;320928;320929;320930;320931;320932 254160;254161;254162;254163;254164;254165;254166;254167;254168;254169;254170;254171;254172;254173;254174;254175;254176;254177;254178;254179;254180;254181;254182;254183 254180 24 NQGGSSWEAPYSR Unmodified 1437.6273 0.62730558 2721 Q5BKZ1 ZNF326 DBIRD complex subunit ZNF326 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching 10 0 5 1 1 1 1 1 42.889 43.13 2 0.0020419 48232 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 60.49 55.584 46179000 0 0 0 0 6263300 0 0 2989900 0 0 9414800 0 15371000 0 12139000 38503 2721 34337 320933;320934;320935;320936;320937 254184 254184 1 NQGGYGGSSSSSSYGSGR Unmodified 1693.6928 0.69281896 891 P09651 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.371 15.542 2 3.0691E-62 14313 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 192.14 188.5 533360000 0 0 0 13037000 9017900 10234000 23684000 13960000 10558000 18207000 55644000 88312000 38693000 67354000 184660000 38504 891 34338 320938;320939;320940;320941;320942;320943;320944;320945;320946;320947;320948;320949 254185;254186;254187;254188;254189;254190;254191;254192;254193;254194;254195;254196 254188 12 NQGGYGGSSSSSSYGSGRR Unmodified 1849.7939 0.79392999 891 P09651 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 11.925 12.21 3 0.002524 10539 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.181 28.34 9222900 0 0 0 0 0 0 0 0 0 1171200 0 2086900 0 1421800 4543000 38505 891 34339 320950;320951;320952;320953 254197;254198;254199 254197 3 NQGIEEALK Unmodified 1000.5189 0.51892433 1073 P18206 VCL Vinculin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.18 3.74 3 1 7 1 2 1 1 1 1 1 1 1 1 40.411 36.529 2 0.0051376 39513 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.452 61.754 1369700000 57918000 1125400000 10846000 0 0 0 0 0 0 0 0 0 0 0 175490000 38506 1073 34340 320954;320955;320956;320957;320958;320959;320960;320961;320962;320963;320964 254200;254201;254202;254203;254204;254205;254206;254207;254208;254209;254210;254211 254205 12 NQGLFHR Unmodified 870.44603 0.44603416 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 20.871 21.081 2 0.026311 20396 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.994 68.166 175600000 0 0 0 8786800 6649300 10099000 9868900 13976000 0 16892000 16712000 31420000 19902000 14249000 27048000 38507 4139 34341 320965;320966;320967;320968;320969;320970;320971;320972;320973;320974;320975 254212 254212 1 NQGLTVFETGQK Unmodified 1320.6674 0.66737948 408 O60508 CDC40 Pre-mRNA-processing factor 17 yes yes 0 0 0 By MS/MS 10 0 1 1 56.081 56.274 2 0.0033507 63023 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 70.977 53.113 3831000 0 0 0 0 0 0 0 0 0 0 0 0 0 3831000 0 38508 408 34342 320976 254213 254213 1 NQGPQESVVRK Unmodified 1240.6524 0.65239812 399 O60437 PPL Periplakin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 13.004 13.219 3 0.0082121 12447 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 51.841 39.265 36516000 0 0 0 7497000 0 0 3594600 0 2499900 4698900 3468300 6414300 0 3300700 5042000 38509 399 34343 320977;320978;320979;320980;320981;320982;320983;320984 254214;254215;254216 254216 2 NQGSELSGVISSACDK Unmodified 1650.7519 0.75191374 354 O43683 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching 9 2.65 1 7 1 1 1 1 1 1 1 1 59.385 58.81 2 0.00024744 74440 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.412 79.093 48281000 0 29739000 0 0 1533900 0 2214100 1941400 0 0 0 2832100 3370300 2928800 3721700 38510 354 34344 320985;320986;320987;320988;320989;320990;320991;320992 254217;254218 254217 2 NQGSSVSQDSDSQGHSEDSER Unmodified 2234.8908 0.89080308 78 CON__P20930;P20930 FLG Filaggrin yes no 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By matching 10 0 7 1 1 1 1 1 1 1 7.28 7.3758 3 0.021552 5557 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 23.447 23.038 + 10019000 0 0 0 2638700 629340 927080 0 0 0 2103500 0 0 879620 1195400 1645400 38511 78 34345 320993;320994;320995;320996;320997;320998;320999 254219 254219 1 NQHLVSQQK Unmodified 1080.5676 0.56760585 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.3907 6.5155 2 0.0085067 3805 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.423 52.884 21472000 0 0 0 1482900 1838500 1643600 2124800 1462500 1787800 1281600 2218500 1615000 1656500 1846500 2513200 38512 965 34346 321000;321001;321002;321003;321004;321005;321006;321007;321008;321009;321010;321011 254220;254221;254222;254223;254224;254225;254226;254227 254222 8 NQHPVPRGLAPNQESHLQVPEK Unmodified 2474.2779 0.2778532 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 0 1 By MS/MS 2 0 1 1 57.03 48.849 5 0.014605 66628 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 21.223 13.511 32736000 32736000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38513 645 34347 321012 254228 254228 1 NQIDMSLK Oxidation (M) 963.46953 0.46953129 3696 Q92990 GLMN Glomulin yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 27.079 22.842 2 0.012212 30066 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.492 51.961 39566000 0 39566000 0 0 0 0 0 0 0 0 0 0 0 0 0 38514 3696 34348 321013;321014 254229 254229 5265 1 NQIGIFPANYVK Unmodified 1362.7296 0.7295858 2730 Q5HYK7 SH3D19 SH3 domain-containing protein 19 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 78.573 78.677 2 0.0013585 90474 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.676 67.364 76767000 0 0 0 0 4311700 4134300 7533700 5635700 3104900 8013600 6743100 9408700 8019800 6214700 13646000 38515 2730 34349 321015;321016;321017;321018;321019;321020;321021;321022;321023;321024;321025 254230;254231;254232;254233;254234;254235;254236;254237;254238;254239 254233 10 NQIIACNGSIQSIPEIPDDLK Unmodified 2324.1682 0.1682109 1171 P23921 RRM1 Ribonucleoside-diphosphate reductase large subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.16 3.28 4 2 19 1 4 1 1 1 2 1 1 1 2 2 2 2 2 2 85.858 84.853 2;3 8.5455E-129 104522 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 268.13 254.99 2307800000 7928100 2046500000 2026000 3299000 10470000 17695000 5359100 9477800 9750200 29872000 28676000 31522000 9582100 18714000 76945000 38516 1171 34350 321026;321027;321028;321029;321030;321031;321032;321033;321034;321035;321036;321037;321038;321039;321040;321041;321042;321043;321044;321045;321046;321047;321048;321049;321050 254240;254241;254242;254243;254244;254245;254246;254247;254248;254249;254250;254251;254252;254253;254254;254255;254256;254257;254258;254259;254260 254244 18 NQILNLTTDNANILLQIDNAR Unmodified 2366.2554 0.25538642 72 CON__P13645;P13645 KRT10 Keratin, type I cytoskeletal 10 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 93.902 93.797 3 5.228E-10 108850 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 57.989 50.713 + 25330000 0 0 0 22203000 1212200 0 0 0 0 1914300 0 0 0 0 0 38517 72 34351 321051;321052;321053;321054 254261;254262;254263;254264;254265;254266;254267;254268;254269 254264 9 NQITNNQRIK Unmodified 1227.6684 0.66838253 837 P07205 PGK2 Phosphoglycerate kinase 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 5 3 2 16.645 13.148 2;3 0.012625 18691 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.268 26.976 67581000 62192000 0 5388800 0 0 0 0 0 0 0 0 0 0 0 0 38518 837 34352 321055;321056;321057;321058;321059 254270;254271;254272 254270 3 NQITQLESLK Unmodified 1172.6401 0.6401021 2698 Q53EZ4 CEP55 Centrosomal protein of 55 kDa yes yes 0 0 0 By matching By MS/MS By matching 10 0 3 1 1 1 62.424 62.433 2 0.0071417 71439 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 63.184 28.998 10394000 0 0 0 0 2200100 0 0 0 0 0 5550900 0 0 2643300 0 38519 2698 34353 321060;321061;321062 254273 254273 1 NQITTLQGQAK Unmodified 1200.6463 0.64625011 3617 Q92540 SMG7 Protein SMG7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 32.015 31.512 2 0.00049528 34754 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 98.033 49.237 50887000 0 10952000 0 3395600 3385600 4028100 4782000 5143600 4337200 0 9566700 0 0 5296100 0 38520 3617 34354 321063;321064;321065;321066;321067;321068;321069;321070;321071;321072;321073;321074 254274;254275;254276;254277;254278;254279;254280;254281;254282;254283;254284 254274 11 NQIVFDNR Unmodified 1004.5039 0.50394296 3371 Q8N8S7 ENAH Protein enabled homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 37.165 37.33 2 0.0067838 40927 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 97.093 60.118 411300000 0 0 0 28133000 31084000 33398000 29143000 22047000 24895000 46770000 36277000 57497000 0 35295000 66767000 38521 3371 34355 321075;321076;321077;321078;321079;321080;321081;321082;321083;321084;321085 254285;254286;254287;254288;254289;254290;254291;254292;254293;254294;254295;254296 254289 12 NQKPVPAVPVQK Unmodified 1303.7612 0.76122028 4199 Q9BW19 KIFC1 Kinesin-like protein KIFC1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 32.476 32.103 3 0.00046758 34957 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 54.286 36.018 129670000 24665000 0 0 10054000 10479000 3952700 21122000 11417000 5304200 0 13989000 11141000 8227800 6980000 2334700 38522 4199 34356 321086;321087;321088;321089;321090;321091;321092;321093;321094;321095;321096;321097 254297;254298;254299;254300;254301;254302;254303;254304 254299 8 NQLCDLETK Unmodified 1119.523 0.52302343 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 35.722 35.085 2 0.00039119 44128 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.02 111.17 345160000 0 175000000 0 9795100 7594100 9574300 0 0 9226800 18922000 20454000 24212000 17864000 14953000 37564000 38523 1201 34357 321098;321099;321100;321101;321102;321103;321104;321105;321106;321107;321108;321109 254305;254306;254307;254308;254309;254310;254311;254312;254313 254306 8 NQLCEIPK Unmodified 1000.5012 0.50116577 4468 Q9H9A6 LRRC40 Leucine-rich repeat-containing protein 40 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 37.052 37.311 2 0.020846 40948 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 62.464 43.689 139420000 0 0 0 0 10055000 14177000 0 0 11908000 15942000 16709000 30802000 0 14488000 25337000 38524 4468 34358 321110;321111;321112;321113;321114;321115;321116;321117 254314;254315;254316 254315 3 NQLDQEVEFLSTSIAQLK Unmodified 2062.0582 0.058249746 4013 Q99471 PFDN5 Prefoldin subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 1 4 2 99.494 94.827 2;3 1.9131E-147 117959 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 281.48 264.27 300890000 10999000 279710000 10178000 0 0 0 0 0 0 0 0 0 0 0 0 38525 4013 34359 321118;321119;321120;321121;321122;321123;321124 254317;254318;254319;254320;254321;254322;254323 254318 7 NQLEESEFTCAAAVK Unmodified 1695.7774 0.77740021 3639 Q92614 MYO18A Unconventional myosin-XVIIIa yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 8.86 2.8 1 6 1 1 1 1 1 1 1 62.257 61.386 2 0.00067725 76882 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.301 80.814 45168000 0 28310000 0 2373500 0 0 0 0 0 2897700 0 3879200 3169200 0 4538100 38526 3639 34360 321125;321126;321127;321128;321129;321130;321131 254324;254325;254326;254327 254326 3 NQLETAPPHELK Unmodified 1375.7096 0.70957864 5061 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 39.588 35.318 3 0.0027489 44435 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 62.338 54.555 248240000 0 236810000 11425000 0 0 0 0 0 0 0 0 0 0 0 0 38527 5061 34361 321132;321133 254328;254329 254329 0 NQLLEAVNK Unmodified 1027.5662 0.56620887 5183 Q9Y448 KNSTRN Small kinetochore-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 44.567 44.287 2 0.0036487 49826 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 95.531 50.449 730650000 0 357530000 0 20867000 20816000 24238000 29714000 21958000 29000000 36916000 29009000 32405000 34571000 37824000 55808000 38528 5183 34362 321134;321135;321136;321137;321138;321139;321140;321141;321142;321143;321144;321145;321146 254330;254331;254332;254333;254334;254335;254336;254337;254338;254339;254340;254341;254342;254343 254338 14 NQLLETR Unmodified 872.47158 0.4715802 99 Q6KB66;CON__Q6KB66-1;CON__Q0VBK2 KRT80 Keratin, type II cytoskeletal 80 yes no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.888 27.086 2 0.04888 29281 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 64.757 25.951 + 361930000 0 0 0 67604000 19355000 23108000 22318000 38255000 16165000 31686000 29890000 47638000 29775000 20175000 15960000 38529 99 34363 321147;321148;321149;321150;321151;321152;321153;321154;321155;321156;321157;321158 254344 254344 1 NQLLIPELK Unmodified 1066.6386 0.63864553 3497 Q8TD26 CHD6 Chromodomain-helicase-DNA-binding protein 6 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 82.726 78.716 2 0.018368 98046 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.732 65.144 21396000 0 21396000 0 0 0 0 0 0 0 0 0 0 0 0 0 38530 3497 34364 321159;321160 254345 254345 1 NQLLLVTEEK Unmodified 1185.6605 0.66050319 2376 Q14149 MORC3 MORC family CW-type zinc finger protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 62.641 62.367 2 0.0055861 72194 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 80.231 61.137 11576000 0 0 0 2639500 2347800 3627600 2961300 0 0 0 0 0 0 0 0 38531 2376 34365 321161;321162;321163;321164 254346;254347;254348;254349 254348 4 NQLLPELQVIHNR Unmodified 1572.8736 0.87362428 4919 Q9UI26 IPO11 Importin-11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.925 77.021 3 1.4252E-05 88372 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.69 59.389 47317000 0 0 0 1292800 0 6478000 1658800 2120200 2287100 4746700 3593700 3945300 1621500 3169800 16403000 38532 4919 34366 321165;321166;321167;321168;321169;321170;321171;321172;321173;321174;321175 254350;254351;254352;254353;254354;254355;254356;254357;254358 254353 9 NQLMQLPR Unmodified 998.53313 0.5331346 2979 Q6UWE0 LRSAM1 E3 ubiquitin-protein ligase LRSAM1 yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 55.47 55.831 2 0.034341 62499 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.163 10.163 11040000 0 0 0 0 0 0 0 0 0 1747900 0 2420000 1799900 1672600 3399200 38533 2979 34367 321176;321177;321178;321179;321180 254359 254359 1 NQLNEDYK Unmodified 1022.4669 0.46688876 3157 Q86UV5 USP48 Ubiquitin carboxyl-terminal hydrolase 48 yes yes 0 0 0 By MS/MS 2 0 1 1 20.972 17.259 2 0.0024727 22631 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.69 75.841 51866000 0 51866000 0 0 0 0 0 0 0 0 0 0 0 0 0 38534 3157 34368 321181 254360 254360 1 NQLQGLQK Unmodified 927.51378 0.51377937 3194 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 22.269 22.93 2 0.017432 23628 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 65.672 34.369 6162600 0 0 0 0 0 0 0 0 0 0 0 6162600 0 0 0 38535 3194 34369 321182;321183 254361;254362 254362 2 NQLREIMK Unmodified 1030.5593 0.55934935 2812 Q5VT79;P13928 ANXA8L2;ANXA8 Annexin A8-like protein 2;Annexin A8 yes no 0 0 1 By MS/MS 2 0 1 1 40.446 33.823 2 0.035593 46873 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.31 79.02 92216000 92216000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38536 2812 34370 321184 254363 254363 0 NQLREMELELAQTK Oxidation (M) 1717.8669 0.86688392 5171 Q9Y3P9 RABGAP1 Rab GTPase-activating protein 1 yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 57.35 51.299 3 0.016169 69601 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.278 28.254 19470000 15505000 0 3964200 0 0 0 0 0 0 0 0 0 0 0 0 38537 5171 34371 321185;321186 254364 254364 6547 1 NQLREMELELAQTK Unmodified 1701.872 0.8719693 5171 Q9Y3P9 RABGAP1 Rab GTPase-activating protein 1 yes yes 0 0 1 By MS/MS 2 0 2 2 80.231 72.101 2;3 1.7773E-13 94598 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 116.24 88.757 80352000 80352000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38538 5171 34371 321187;321188 254365;254366 254365 1 NQLSNSTQGLHK Unmodified 1325.6688 0.66877646 294 O15550 KDM6A Lysine-specific demethylase 6A yes yes 0 0 0 By MS/MS By MS/MS 2 0 4 2 2 23.723 19.223 2;3 0.0030799 27004 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 99.815 81.479 60153000 43049000 17104000 0 0 0 0 0 0 0 0 0 0 0 0 0 38539 294 34372 321189;321190;321191;321192 254367;254368 254367 1 NQLTAMSSVLAK Unmodified 1261.67 0.67002202 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 72.518 72.575 2 2.723E-05 83512 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 99.53 52.639 180530000 0 0 0 10700000 9938400 14321000 12526000 13452000 8685700 17625000 25160000 23935000 0 0 44186000 38540 2378 34373 321193;321194;321195;321196;321197;321198;321199;321200;321201;321202;321203 254369;254370;254371;254372;254373;254374;254375;254376;254377;254378;254379 254370 11 NQLTAMSSVLAK Oxidation (M) 1277.6649 0.66493664 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 1 0 By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 1 1 1 2 2 1 1 2 2 45.069 45.308 2 0.0040922 49846 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.765 36.517 105700000 0 0 0 3813800 3722400 0 5052000 5372900 5921600 14019000 19104000 6452300 8109400 14805000 19330000 38541 2378 34373 321204;321205;321206;321207;321208;321209;321210;321211;321212;321213;321214;321215;321216;321217;321218 254380;254381;254382;254383;254384;254385;254386;254387;254388 254383 3868 2 NQLTSNPENTVFDAK Unmodified 1676.8006 0.8005785 932 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.58 3.65 1 8 2 25 3 5 3 2 2 2 2 2 2 3 2 2 2 2 2 62.266 61.434 2;3 6.9335E-116 93650 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 223.71 204.61 9364300000 205020000 4995600000 42081000 225960000 237170000 212440000 254660000 269300000 199350000 327810000 497300000 536640000 347950000 346550000 666430000 38542 932 34374 321219;321220;321221;321222;321223;321224;321225;321226;321227;321228;321229;321230;321231;321232;321233;321234;321235;321236;321237;321238;321239;321240;321241;321242;321243;321244;321245;321246;321247;321248;321249;321250;321251;321252;321253;321254 254389;254390;254391;254392;254393;254394;254395;254396;254397;254398;254399;254400;254401;254402;254403;254404;254405;254406;254407;254408;254409;254410;254411;254412;254413;254414;254415;254416;254417;254418;254419;254420;254421;254422;254423;254424;254425;254426;254427;254428 254406 36 NQLTSNPENTVFDAKR Unmodified 1832.9017 0.90168952 932 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 52.139 52.285 3 0.00038067 60001 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 53.169 46.588 75893000 0 0 0 5707600 6525700 0 5711100 5534700 0 5440600 12512000 15760000 7020800 0 11680000 38543 932 34375 321255;321256;321257;321258;321259;321260;321261;321262;321263 254429;254430;254431;254432;254433;254434;254435 254434 7 NQLVTPEPTSR Unmodified 1240.6412 0.64116473 2427 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 35.032 35.237 2 0.00028233 38703 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 90.629 73.533 114090000 0 0 0 7783300 4311300 0 9173200 8355200 0 11974000 9432000 15702000 10841000 15284000 21231000 38544 2427 34376 321264;321265;321266;321267;321268;321269;321270;321271;321272;321273;321274 254436;254437;254438;254439;254440;254441;254442;254443;254444;254445;254446;254447;254448;254449 254437 14 NQMGQVEIEDQVEGLQFVAEK Oxidation (M) 2406.1373 0.1373047 3136 Q86TI2 DPP9 Dipeptidyl peptidase 9 yes yes 0 1 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 86.816 83.317 3 1.8485E-13 99627 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 96.379 91.74 34912000 0 33087000 1825600 0 0 0 0 0 0 0 0 0 0 0 0 38545 3136 34377 321275;321276;321277 254450;254451 254451 4761 2 NQMGQVEIEDQVEGLQFVAEK Unmodified 2390.1424 0.14239008 3136 Q86TI2 DPP9 Dipeptidyl peptidase 9 yes yes 0 0 0 By MS/MS 3 0 1 1 89.068 85.857 3 0.00086269 102864 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 45.696 31.534 5396400 0 5396400 0 0 0 0 0 0 0 0 0 0 0 0 0 38546 3136 34377 321278 254452;254453 254453 2 NQMLIEEEVQK Oxidation (M) 1375.6653 0.66533057 5235 Q9Y5K5 UCHL5 Ubiquitin carboxyl-terminal hydrolase isozyme L5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.53 2.94 1 2 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 44.177 43.26 2 2.9031E-12 55113 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 154.35 126.34 568730000 261780 429630000 0 5986700 7516800 13602000 7967300 6821000 9812500 12095000 19025000 20128000 7869100 10123000 17889000 38547 5235 34378 321279;321280;321281;321282;321283;321284;321285;321286;321287;321288;321289;321290;321291;321292;321293 254454;254455;254456;254457;254458;254459;254460;254461;254462;254463;254464;254465;254466;254467 254458 6638 14 NQMLIEEEVQK Unmodified 1359.6704 0.67041595 5235 Q9Y5K5 UCHL5 Ubiquitin carboxyl-terminal hydrolase isozyme L5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.91 3.42 2 1 8 1 2 1 1 1 1 1 1 1 1 55.814 54.989 2 5.4139E-10 70816 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 171.36 142.96 304910000 0 233520000 0 0 0 6353000 3637400 0 0 6824600 9420100 13587000 5822300 7117500 18633000 38548 5235 34378 321294;321295;321296;321297;321298;321299;321300;321301;321302;321303;321304 254468;254469;254470;254471;254472;254473;254474;254475;254476;254477;254478;254479;254480;254481;254482;254483 254474 16 NQNAPDSRPEENFFSR Unmodified 1906.8558 0.85580196 4490 Q9HAU5 UPF2 Regulator of nonsense transcripts 2 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 51.622 51.091 3 0.0078952 58223 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 36.029 30.369 9052800 0 0 0 0 9052800 0 0 0 0 0 0 0 0 0 0 38549 4490 34379 321305;321306 254484;254485 254485 2 NQNDPLPGR Unmodified 1009.4941 0.49410656 517 O75534 CSDE1 Cold shock domain-containing protein E1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 22.865 23.532 2 0.0204 23744 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.992 79.327 94741000 0 0 0 0 0 0 0 0 0 0 0 40293000 0 0 54447000 38550 517 34380 321307;321308;321309;321310 254486;254487;254488;254489 254486 2 NQNDPLPGRIK Unmodified 1250.6731 0.67313356 517 O75534 CSDE1 Cold shock domain-containing protein E1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 2 3 2 38.993 34.01 2;3 0.00022277 44387 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.916 65.583 1253100000 774670000 189030000 289390000 0 0 0 0 0 0 0 0 0 0 0 0 38551 517 34381 321311;321312;321313;321314;321315;321316;321317 254490;254491;254492;254493;254494;254495;254496;254497 254490 7 NQNSWGTGEDVK Unmodified 1333.5899 0.58985744 1111 P20700 LMNB1 Lamin-B1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 29.663 28.83 2 5.1784E-18 36906 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 157.24 153.13 153080000 0 44894000 0 0 0 0 0 4904200 0 0 0 0 86806000 0 16474000 38552 1111 34382 321318;321319;321320;321321 254498;254499;254500 254499 3 NQPDYYEVVSQPIDLMK Oxidation (M) 2053.9667 0.96665755 3143 Q86U86 PBRM1 Protein polybromo-1 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 80.54 80.604 2 1.2713E-06 93314 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 80.522 75.243 38649000 0 0 0 1278200 0 3801500 3076100 0 3662000 8375600 4971200 5458400 3968600 4057200 0 38553 3143 34383 321322;321323;321324;321325;321326;321327;321328;321329;321330 254501;254502;254503;254504;254505;254506;254507 254502 4769 5 NQPEVDMSDR Unmodified 1189.5034 0.50335062 2530 Q15404 RSU1 Ras suppressor protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 26.55 26.789 2 0.019804 28402 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 47.603 39.382 33399000 0 0 0 0 1672900 3106500 2178600 2253200 1511700 2661900 3372800 5714900 3065800 2789100 5072100 38554 2530 34384 321331;321332;321333;321334;321335;321336;321337;321338;321339;321340;321341 254508;254509;254510;254511;254512;254513 254511 6 NQPIYIQYSNHK Unmodified 1503.747 0.74702678 4960 Q9UKA9 PTBP2 Polypyrimidine tract-binding protein 2 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 45.117 44.905 3 0.0024748 50184 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 59.155 38.095 42002000 0 0 0 4570300 4793400 0 14294000 0 0 18345000 0 0 0 0 0 38555 4960 34385 321342;321343;321344;321345;321346 254514;254515;254516;254517 254515 4 NQPQFQQMR Unmodified 1175.5506 0.55057558 1746 P54727 RAD23B UV excision repair protein RAD23 homolog B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.32 32.507 2 0.0051115 34191 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 81.635 47.838 163930000 0 0 0 4120600 3122400 5950500 5923200 8511800 4896700 9392500 22537000 25622000 6315700 16222000 51317000 38556 1746 34386 321347;321348;321349;321350;321351;321352;321353;321354;321355;321356;321357;321358 254518;254519;254520;254521;254522;254523;254524;254525;254526;254527;254528 254523 11 NQPQFQQMR Oxidation (M) 1191.5455 0.5454902 1746 P54727 RAD23B UV excision repair protein RAD23 homolog B yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 18.378 18.576 2 0.014468 17738 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.541 90.846 60800000 0 0 0 1319600 2300600 2809100 3081400 3049000 1976700 0 7279000 10279000 3517000 7295100 17894000 38557 1746 34386 321359;321360;321361;321362;321363;321364;321365;321366;321367;321368;321369 254529;254530;254531 254529 2838 2 NQPQRPESFLFR Unmodified 1517.7739 0.77391024 3877 Q96II8 LRCH3 Leucine-rich repeat and calponin homology domain-containing protein 3 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 63.268 63.398 3 0.033857 72348 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 26.541 16.42 70424000 0 0 0 8036300 0 0 0 5423600 0 10018000 10841000 0 11366000 9747500 14992000 38558 3877 34387 321370;321371;321372;321373;321374;321375;321376 254532 254532 1 NQPTNVTLSSGFVADR Unmodified 1704.8431 0.84311201 4026 Q99575 POP1 Ribonucleases P/MRP protein subunit POP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.879 65.963 2 8.3202E-05 75490 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 95.401 79.862 60492000 0 0 0 2695900 3360400 4606000 3231600 3465900 2604100 6893900 6274200 7341000 6025700 5723000 8270600 38559 4026 34388 321377;321378;321379;321380;321381;321382;321383;321384;321385;321386;321387;321388 254533;254534;254535;254536;254537;254538;254539;254540;254541;254542;254543;254544 254537 12 NQQAIQTVR Unmodified 1056.5676 0.56760585 5233 Q9Y5J5 PHLDA3 Pleckstrin homology-like domain family A member 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 19.482 19.373 2 0.0031541 19856 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 92.439 54.201 27039000 0 0 0 5089800 6438800 8783100 6726800 0 0 0 0 0 0 0 0 38560 5233 34389 321389;321390;321391;321392;321393;321394 254545;254546;254547;254548;254549;254550 254545 5 NQQEIPSYLNDEPPEGSMK Oxidation (M) 2190.9739 0.97392777 3546 Q8WUH6 TMEM263 Transmembrane protein 263 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 2 2 1 1 2 2 2 2 2 2 1 1 62.607 62.677 2;3 8.757E-75 71925 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 171.21 166.03 1983500000 0 0 0 147250000 191990000 90270000 133250000 158770000 145270000 212380000 304140000 319540000 115020000 63811000 101830000 38561 3546 34390 321395;321396;321397;321398;321399;321400;321401;321402;321403;321404;321405;321406;321407;321408;321409;321410;321411;321412;321413;321414 254551;254552;254553;254554;254555;254556;254557;254558;254559;254560;254561;254562;254563;254564;254565;254566;254567;254568;254569;254570;254571;254572;254573;254574;254575;254576 254560 5040 26 NQQEIPSYLNDEPPEGSMK Unmodified 2174.979 0.97901315 3546 Q8WUH6 TMEM263 Transmembrane protein 263 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 69.347 69.421 2;3 3.4056E-96 80223 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 212.95 203.9 1475200000 0 0 0 64569000 96832000 136150000 93408000 86187000 79865000 124460000 195350000 204520000 70084000 104480000 219340000 38562 3546 34390 321415;321416;321417;321418;321419;321420;321421;321422;321423;321424;321425;321426;321427;321428;321429;321430;321431;321432;321433;321434;321435;321436;321437;321438 254577;254578;254579;254580;254581;254582;254583;254584;254585;254586;254587;254588;254589;254590;254591;254592;254593;254594;254595;254596;254597;254598;254599;254600;254601;254602;254603;254604;254605;254606;254607;254608;254609 254604 28 NQQIARPSQEEK Unmodified 1426.7165 0.71645494 488 O75376 NCOR1 Nuclear receptor corepressor 1 yes yes 0 0 1 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 1 1 1 2 1 1 2 2 2 2 11.539 11.705 2;3 0.014145 10537 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 41.242 23.576 93099000 0 0 0 5725000 5750800 8224800 6146700 7949000 6283600 8474900 0 12380000 9938500 10453000 11773000 38563 488 34391 321439;321440;321441;321442;321443;321444;321445;321446;321447;321448;321449;321450;321451;321452;321453;321454 254610;254611;254612;254613;254614;254615;254616;254617;254618;254619 254615 5 NQQIFLR Unmodified 917.5083 0.50830006 1934 P62993 GRB2 Growth factor receptor-bound protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 45.162 45.343 2 0.02139 49492 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 106.76 70.174 118230000 0 0 0 4763500 4307200 0 5991400 5068700 4709800 8185600 18698000 22308000 7440200 12308000 24453000 38564 1934 34392 321455;321456;321457;321458;321459;321460;321461;321462;321463;321464;321465 254620;254621;254622;254623 254621 4 NQQITHANNTVSNFK Unmodified 1714.8387 0.83869534 3633 Q92598 HSPH1 Heat shock protein 105 kDa yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.42 3.66 6 2 16 2 4 2 1 1 1 1 1 1 1 2 2 1 2 2 32.989 31.559 2;3 2.6514E-210 42328 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 259.48 234.63 5048700000 1624400000 2503400000 570110000 8489800 9097400 15611000 14462000 13151000 11213000 13779000 50327000 48320000 14174000 38561000 113580000 38565 3633 34393 321466;321467;321468;321469;321470;321471;321472;321473;321474;321475;321476;321477;321478;321479;321480;321481;321482;321483;321484;321485;321486;321487;321488;321489 254624;254625;254626;254627;254628;254629;254630;254631;254632;254633;254634;254635;254636;254637;254638;254639;254640;254641;254642;254643;254644;254645;254646;254647;254648;254649;254650;254651 254627 24 NQQLHTVTLQTVPLTTVIASTDPSAGTGSQK Unmodified 3192.6626 0.66263504 1322 P32519 ELF1 ETS-related transcription factor Elf-1 yes yes 0 0 0 By MS/MS 10 0 1 1 85.86 86.028 3 2.2435E-24 99424 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.345 52.744 6966900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6966900 38566 1322 34394 321490 254652;254653 254652 2 NQQPVLPAGLQVPK Unmodified 1487.846 0.84601255 2062 Q01780 EXOSC10 Exosome component 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.236 76.33 2 0.00018461 88145 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 81.525 67.439 114200000 0 0 0 5570900 0 6117800 7332200 7786700 7411000 13121000 10969000 14160000 11469000 12989000 17270000 38567 2062 34395 321491;321492;321493;321494;321495;321496;321497;321498;321499;321500;321501;321502 254654;254655;254656;254657;254658;254659;254660;254661;254662;254663;254664;254665 254659 12 NQQSLAVSNMGAR Oxidation (M) 1390.6623 0.66231088 1479 P43378 PTPN9 Tyrosine-protein phosphatase non-receptor type 9 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 23.13 23.34 2 2.9553E-08 23924 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 104.22 83.351 38136000 0 0 0 2202400 2256100 2636600 3286400 3919600 0 2974500 3828600 4512600 5325200 3004600 4189600 38568 1479 34396 321503;321504;321505;321506;321507;321508;321509;321510;321511;321512;321513 254666;254667;254668;254669;254670;254671;254672;254673;254674;254675 254673 2325 10 NQQSLAVSNMGAR Unmodified 1374.6674 0.66739625 1479 P43378 PTPN9 Tyrosine-protein phosphatase non-receptor type 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 38.976 39.259 2 0.00052153 43592 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 78.655 66.028 20325000 0 0 0 0 2540800 0 3358000 0 0 0 0 3592900 7377900 0 3455000 38569 1479 34396 321514;321515;321516;321517;321518;321519;321520 254676;254677;254678;254679;254680 254679 5 NQQTIGAR Unmodified 886.46208 0.46207815 3043 Q7L1Q6 BZW1 Basic leucine zipper and W2 domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 7.8154 7.9255 2 0.032623 5757 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 54.205 18.711 78955000 0 0 0 6318700 8202600 10714000 9836300 7978600 10884000 5635500 0 5356000 4077200 4010900 5941800 38570 3043 34397 321521;321522;321523;321524;321525;321526;321527;321528;321529;321530;321531 254681;254682 254681 2 NQREHTALLK Unmodified 1208.6626 0.66256887 1070 P18077 RPL35A 60S ribosomal protein L35a yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 12.617 12.796 3 0.0060487 11330 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 58.699 35.959 108760000 0 0 0 4192000 0 3512900 5684300 7398900 4958400 10111000 12228000 16722000 13861000 10041000 20054000 38571 1070 34398 321532;321533;321534;321535;321536;321537;321538;321539;321540;321541;321542 254683;254684;254685 254684 2 NQSDADLEALRK Unmodified 1358.679 0.6790068 2333 Q13625 TP53BP2 Apoptosis-stimulating of p53 protein 2 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 35.493 35.941 3 0.038549 39611 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 21.61 6.4079 20566000 0 0 0 0 0 0 0 0 0 8825900 0 11740000 0 0 0 38572 2333 34399 321543;321544 254686 254686 1 NQSFCPTVNLDK Unmodified 1421.6609 0.66091389 1507 P46776 RPL27A 60S ribosomal protein L27a yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 58.228 58.075 2 0.021104 66223 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 40.154 31.177 16642000 0 0 0 0 6745000 0 0 0 0 0 0 0 9896800 0 0 38573 1507 34400 321545;321546 254687 254687 1 NQSIIVSGESGAGK Unmodified 1345.6838 0.68375782 4580;5006;5204 Q9NQX4;Q9ULV0;Q9Y4I1 MYO5C;MYO5B;MYO5A Unconventional myosin-Vc;Unconventional myosin-Vb;Unconventional myosin-Va no no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 34.33 34.227 2 0.00031172 37465 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 78.692 68.46 37484000 0 0 0 8173200 8211100 7632700 6708900 0 0 0 0 0 0 6757900 0 38574 4580;5006;5204 34401 321547;321548;321549;321550;321551;321552 254688;254689;254690;254691 254689 4 NQSLEGDTTK Unmodified 1091.5095 0.50948185 1418 P40692 MLH1 DNA mismatch repair protein Mlh1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 10.178 9.951 2 0.0043308 8776 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 73.233 51.383 100310000 4554400 0 0 8132000 5156000 8097900 9183900 8480700 6655500 8425400 0 12149000 9649200 7305300 12520000 38575 1418 34402 321553;321554;321555;321556;321557;321558;321559;321560;321561;321562;321563;321564 254692;254693;254694;254695;254696;254697;254698;254699;254700;254701;254702 254693 11 NQSLTLIELLK Unmodified 1270.7497 0.74965254 4407 Q9H582 ZNF644 Zinc finger protein 644 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 91.938 90.982 2 0.0052433 114851 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.294 55.297 21583000 12109000 0 579380 0 0 1109100 588810 537150 0 1927200 920830 0 654130 862760 2294700 38576 4407 34403 321565;321566;321567;321568;321569;321570;321571;321572;321573;321574 254703;254704;254705;254706 254705 4 NQSLVEENEK Unmodified 1188.5622 0.5622457 632 O95239;Q2VIQ3 KIF4A;KIF4B Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19.625 19.166 2 0.0020908 23472 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.69 73.441 147000000 4831300 19792000 0 7787100 5549200 8278600 9563100 6927400 5797000 14088000 10306000 15191000 10800000 8617800 19476000 38577 632 34404 321575;321576;321577;321578;321579;321580;321581;321582;321583;321584;321585;321586;321587;321588 254707;254708;254709 254707 3 NQSPTEAEKPASSSLPSSPPPQLLTR Unmodified 2718.3824 0.38243743 4023 Q99567 NUP88 Nuclear pore complex protein Nup88 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 68.765 68.769 3 4.572E-11 79568 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 57.578 54.816 51773000 0 0 0 4581100 5240300 0 9652400 7351800 0 0 6046500 12353000 6547700 0 0 38578 4023 34405 321589;321590;321591;321592;321593;321594;321595 254710;254711;254712;254713;254714;254715;254716;254717;254718 254717 9 NQSQGYNQWQQGQFWGQK Unmodified 2210.9882 0.98821312 2046 Q00839 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 2 24 2 2 2 2 2 2 2 2 2 2 2 2 2 73.218 72.651 2;3 0 83331 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 304.68 284.58 2815500000 103800000 0 0 130310000 196110000 201880000 100500000 182150000 179070000 254070000 246510000 338380000 258100000 204630000 419970000 38579 2046 34406 321596;321597;321598;321599;321600;321601;321602;321603;321604;321605;321606;321607;321608;321609;321610;321611;321612;321613;321614;321615;321616;321617;321618;321619;321620;321621 254719;254720;254721;254722;254723;254724;254725;254726;254727;254728;254729;254730;254731;254732;254733;254734;254735;254736;254737;254738;254739;254740;254741;254742 254725 21 NQSSEDILRDAQVANK Unmodified 1786.881 0.88095408 2333 Q13625 TP53BP2 Apoptosis-stimulating of p53 protein 2 yes yes 0 0 1 By MS/MS 2.33 0.471 2 1 3 56.714 51.369 2;3 0.00014297 66340 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.845 69.213 77510000 0 77510000 0 0 0 0 0 0 0 0 0 0 0 0 0 38580 2333 34407 321622;321623;321624 254743;254744;254745 254744 3 NQSTTYPVYTESTDDK Unmodified 1847.8061 0.80611738 1181 P25054 APC Adenomatous polyposis coli protein yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 41.75 41.951 2 1.9007E-05 46809 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 103.75 88.875 11016000 0 0 0 0 0 0 0 2649500 0 5504400 0 0 0 2862100 0 38581 1181 34408 321625;321626;321627 254746 254746 0 NQTAEKEEFEHQQK Unmodified 1744.8016 0.80164113 934 P11142 HSPA8 Heat shock cognate 71 kDa protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.564 11.729 3 8.6526E-06 9923 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.202 74.912 189380000 0 0 0 12108000 7325300 0 12543000 10540000 2991700 12369000 9591000 52441000 17293000 16202000 35971000 38582 934 34409 321628;321629;321630;321631;321632;321633;321634;321635;321636;321637;321638 254747;254748;254749;254750;254751;254752;254753;254754;254755;254756 254748 9 NQTLTDWLLDAPK Unmodified 1513.7777 0.77765821 327 O43426 SYNJ1 Synaptojanin-1 yes yes 0 0 0 By MS/MS 2 0 1 1 94.903 90.038 2 0.0039442 111693 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.184 66.881 11238000 0 11238000 0 0 0 0 0 0 0 0 0 0 0 0 0 38583 327 34410 321639 254757 254757 1 NQTLTENLLK Unmodified 1172.6401 0.6401021 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 60.92 59.583 2 0.0019539 66723 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 97.431 63.178 414630000 7968800 288940000 3952700 5780200 4821300 5280500 7246600 4239800 5056800 9312500 17173000 12317000 8813200 11491000 22235000 38584 2495 34411 321640;321641;321642;321643;321644;321645;321646;321647;321648;321649;321650;321651;321652;321653;321654;321655 254758;254759;254760;254761;254762;254763;254764;254765;254766;254767;254768;254769 254766 12 NQTNLPTENVDK Unmodified 1371.663 0.66302238 5194 Q9Y4C2 TCAF1 TRPM8 channel-associated factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 33.007 32.947 2 0.0005662 34950 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 77.662 59.798 6558800 0 0 0 0 3195100 0 0 0 0 0 0 0 0 3363700 0 38585 5194 34412 321656;321657;321658;321659;321660;321661;321662 254770;254771;254772;254773;254774;254775;254776;254777 254774 8 NQTPAPSAAQTSAPSK Unmodified 1554.7638 0.76379906 4808 Q9P265 DIP2B Disco-interacting protein 2 homolog B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.759 22 2 7.536E-07 22624 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 84.365 72.499 66023000 0 0 0 0 2823000 6433800 5437500 5456700 4312900 6609000 7268700 9329700 4864700 4948400 8539000 38586 4808 34413 321663;321664;321665;321666;321667;321668;321669;321670;321671;321672;321673;321674 254778;254779;254780;254781;254782;254783;254784;254785;254786;254787;254788;254789 254787 12 NQTPLPLIK Unmodified 1022.6124 0.61243078 2616 Q16594;Q9HBM6 TAF9;TAF9B Transcription initiation factor TFIID subunit 9;Transcription initiation factor TFIID subunit 9B yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 66.286 65.939 2 0.018744 85526 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.282 62.022 183720000 0 20308000 0 7136800 9511200 11934000 11665000 11959000 8836800 13371000 17637000 23941000 16036000 12999000 18389000 38587 2616 34414 321675;321676;321677;321678;321679;321680;321681;321682;321683;321684;321685;321686;321687 254790;254791;254792;254793;254794;254795;254796;254797 254792 6 NQTQLNTTWLR Unmodified 1373.7052 0.70516197 3950 Q96PZ0 PUS7 Pseudouridylate synthase 7 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 68.373 66.984 2 0.0015109 76427 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 72.243 58.125 230310000 114490000 60367000 4077200 2146000 2241300 3499500 3601100 5556000 0 0 9043300 6995500 0 5847900 12448000 38588 3950 34415 321688;321689;321690;321691;321692;321693;321694;321695;321696;321697;321698;321699;321700 254798;254799;254800;254801;254802;254803;254804;254805;254806 254804 9 NQTRNPENHEDPPLK Unmodified 1787.8551 0.85507368 2664 Q32P41 TRMT5 tRNA (guanine(37)-N1)-methyltransferase yes yes 0 0 1 By MS/MS 2 0 1 1 20.193 17.479 3 0.0063945 22103 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 41.621 28.502 13197000 0 0 13197000 0 0 0 0 0 0 0 0 0 0 0 0 38589 2664 34416 321701 254807 254807 1 NQTSLLGEPPK Unmodified 1182.6245 0.62445203 4516 Q9HCJ3 RAVER2 Ribonucleoprotein PTB-binding 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 45.201 44.921 2 0.0048432 50186 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 71.349 65.568 185680000 0 33188000 0 11167000 9058200 13384000 13311000 11110000 11213000 10653000 13240000 17721000 15879000 11033000 14725000 38590 4516 34417 321702;321703;321704;321705;321706;321707;321708;321709;321710;321711;321712;321713;321714 254808;254809;254810;254811;254812;254813;254814;254815;254816;254817;254818;254819;254820 254818 12 NQVAEMLGHK Unmodified 1125.5601 0.56007764 321 O43379 WDR62 WD repeat-containing protein 62 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 45.589 38.598 2 0.0059178 52905 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.368 66.333 14866000 14866000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38591 321 34418 321715;321716 254821;254822 254821 2 NQVALNPQNTVFDAK Unmodified 1657.8424 0.84238373 908 P0DMV9;P0DMV8 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.11 3.8 1 10 3 24 4 8 2 2 2 2 2 2 2 2 2 2 2 2 2 70.471 69.225 2;3 2.4966E-71 78653 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 184.03 146.48 22831000000 759590000 16310000000 83265000 248670000 194600000 274680000 308660000 244540000 235880000 479760000 813730000 694860000 341320000 556050000 1285400000 38592 908 34419 321717;321718;321719;321720;321721;321722;321723;321724;321725;321726;321727;321728;321729;321730;321731;321732;321733;321734;321735;321736;321737;321738;321739;321740;321741;321742;321743;321744;321745;321746;321747;321748;321749;321750;321751;321752;321753;321754 254823;254824;254825;254826;254827;254828;254829;254830;254831;254832;254833;254834;254835;254836;254837;254838;254839;254840;254841;254842;254843;254844;254845;254846;254847;254848;254849;254850;254851;254852;254853;254854;254855;254856;254857;254858;254859;254860;254861;254862;254863;254864;254865;254866;254867;254868;254869;254870;254871 254853 48 NQVALNPQNTVFDAKR Unmodified 1813.9435 0.94349476 908 P0DMV9;P0DMV8 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.442 60.547 3 8.6779E-11 68964 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 70.41 65.093 137250000 0 0 0 6456800 5774600 4785800 8727500 4855300 8644100 10225000 18886000 25482000 7596200 9741100 26077000 38593 908 34420 321755;321756;321757;321758;321759;321760;321761;321762;321763;321764;321765;321766 254872;254873;254874;254875;254876;254877;254878;254879;254880;254881 254876 10 NQVAMNPTNTIFDAK Oxidation (M) 1678.7985 0.79847001 1743 P54652 HSPA2 Heat shock-related 70 kDa protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 62.772 61.228 2 4.4546E-42 77915 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 152.55 120.68 143660000 0 121470000 0 0 0 0 3891400 0 0 0 0 7417300 0 3282800 7588600 38594 1743 34421 321767;321768;321769;321770;321771;321772;321773;321774;321775 254882;254883;254884;254885;254886;254887;254888;254889 254884 2832 8 NQVAMNPTNTIFDAK Unmodified 1662.8036 0.80355538 1743 P54652 HSPA2 Heat shock-related 70 kDa protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 73.258 72.879 2 4.6403E-07 83454 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 105.17 89.631 263630000 0 194680000 0 4378600 5699300 0 4617900 3683700 0 5387000 8420300 7528100 6213500 7827400 15190000 38595 1743 34421 321776;321777;321778;321779;321780;321781;321782;321783;321784;321785;321786 254890;254891;254892;254893;254894;254895;254896 254892 6 NQVAMNPTNTVFDAK Oxidation (M) 1664.7828 0.78281994 934 P11142 HSPA8 Heat shock cognate 71 kDa protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.63 3.67 2 18 6 12 4 21 1 1 1 1 1 1 1 1 1 1 1 1 1 60.635 57.778 2;3 4.2101E-61 75168 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 184.58 167.14 11104000000 591970000 6417300000 65190000 187630000 191760000 259030000 265680000 177850000 163390000 298170000 510800000 507390000 255420000 377690000 834570000 38596 934 34422 321787;321788;321789;321790;321791;321792;321793;321794;321795;321796;321797;321798;321799;321800;321801;321802;321803;321804;321805;321806;321807;321808;321809;321810;321811;321812;321813;321814;321815;321816;321817;321818;321819;321820;321821;321822;321823;321824 254897;254898;254899;254900;254901;254902;254903;254904;254905;254906;254907;254908;254909;254910;254911;254912;254913;254914;254915;254916;254917;254918;254919;254920;254921;254922;254923;254924;254925;254926;254927;254928;254929;254930;254931;254932;254933;254934;254935;254936;254937;254938;254939;254940;254941;254942;254943;254944;254945 254908 1214 49 NQVAMNPTNTVFDAK Unmodified 1648.7879 0.78790532 934 P11142 HSPA8 Heat shock cognate 71 kDa protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.81 3.61 2 7 1 27 2 7 1 3 2 2 2 2 3 3 2 1 2 3 2 68.027 67.266 2;3 1.9184E-70 74038 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 212.09 205.85 14276000000 584990000 8576300000 33790000 200550000 153210000 237320000 224200000 246660000 221730000 400320000 615840000 632510000 272620000 504960000 1371100000 38597 934 34422 321825;321826;321827;321828;321829;321830;321831;321832;321833;321834;321835;321836;321837;321838;321839;321840;321841;321842;321843;321844;321845;321846;321847;321848;321849;321850;321851;321852;321853;321854;321855;321856;321857;321858;321859;321860;321861 254946;254947;254948;254949;254950;254951;254952;254953;254954;254955;254956;254957;254958;254959;254960;254961;254962;254963;254964;254965;254966;254967;254968;254969;254970;254971;254972;254973 254961 27 NQVAMNPTNTVFDAKR Oxidation (M) 1820.8839 0.88393097 934 P11142 HSPA8 Heat shock cognate 71 kDa protein yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 45.338 45.455 3 5.6626E-24 50393 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 119.54 113.42 170490000 0 0 0 10127000 7341300 7104900 15294000 6649200 7542900 11633000 33911000 33024000 21381000 16486000 0 38598 934 34423 321862;321863;321864;321865;321866;321867;321868;321869;321870;321871;321872 254974;254975;254976;254977;254978;254979;254980;254981;254982;254983;254984;254985;254986;254987;254988 254986 1214 15 NQVAMNPTNTVFDAKR Unmodified 1804.889 0.88901635 934 P11142 HSPA8 Heat shock cognate 71 kDa protein yes yes 0 0 1 By MS/MS 10 0 1 1 56.343 56.955 3 0.0044309 64160 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.723 35.802 36330000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36330000 38599 934 34423 321873 254989 254989 0 NQVDVEIK Unmodified 943.49746 0.4974606 4329 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 34.348 34.507 2 0.0080807 37229 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 87.435 18.734 233840000 0 0 0 14266000 0 29047000 21282000 22646000 19344000 25976000 57674000 43600000 0 0 0 38600 4329 34424 321874;321875;321876;321877;321878;321879;321880;321881 254990;254991 254991 2 NQVGDENWR Unmodified 1116.4948 0.49483484 3692 Q92973 TNPO1 Transportin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.888 28.086 2 0.00034935 29305 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 147.52 138.99 271510000 0 0 0 15811000 14348000 34449000 17975000 20473000 14787000 25683000 27408000 19221000 16432000 24466000 40455000 38601 3692 34425 321882;321883;321884;321885;321886;321887;321888;321889;321890;321891;321892;321893 254992;254993;254994;254995;254996;254997;254998;254999;255000;255001;255002;255003 254998 11 NQVGDENWRR Unmodified 1272.5959 0.59594587 3692 Q92973 TNPO1 Transportin-1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 21.489 21.735 3 0.023415 21538 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 56.013 47.284 182670000 0 0 0 0 5624500 21858000 7728200 0 0 23740000 19290000 33178000 0 21519000 49733000 38602 3692 34426 321894;321895;321896;321897;321898;321899;321900;321901 255004 255004 0 NQVLTLEEWQDK Unmodified 1501.7413 0.7412727 1661 P51580 TPMT Thiopurine S-methyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS 6.1 3.91 4 1 5 2 2 1 1 1 1 1 1 77.142 74.521 2 3.1145E-14 92945 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.96 121.99 636200000 201400000 402620000 2239500 0 0 0 0 0 0 4133500 5178400 0 4166600 3957600 12499000 38603 1661 34427 321902;321903;321904;321905;321906;321907;321908;321909;321910;321911 255005;255006;255007;255008;255009 255005 5 NQVLVFVHSR Unmodified 1197.6618 0.66184059 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 17 2 2 2 2 2 1 2 2 2 54.242 54.523 2;3 0.0070493 61024 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 72.643 56.44 180960000 0 0 0 0 0 10939000 0 13463000 15562000 22431000 19474000 5204600 26595000 29618000 37671000 38604 528 34428 321912;321913;321914;321915;321916;321917;321918;321919;321920;321921;321922;321923;321924;321925;321926;321927;321928 255010;255011;255012;255013;255014;255015;255016 255015 6 NQVSLTCLVK Unmodified 1160.6223 0.62234354 748;749 P01857;P01859 IGHG1;IGHG2 Ig gamma-1 chain C region;Ig gamma-2 chain C region no no 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 67.172 67.085 2 0.0063431 76837 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 65.305 54.44 145060000 0 0 0 110970000 5850400 6278300 4328000 6285900 3311400 8043700 0 0 0 0 0 38605 748;749 34429 321929;321930;321931;321932;321933;321934;321935 255017;255018 255017 2 NQVSSQTPQQPPTSTFQNSPSALVSTPVR Unmodified 3082.532 0.53195521 488 O75376 NCOR1 Nuclear receptor corepressor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.353 76.411 3 1.9678E-101 88081 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 129.24 126.99 187950000 0 0 0 8815200 13159000 12158000 11693000 12265000 11440000 21255000 17046000 22574000 16728000 14406000 26408000 38606 488 34430 321936;321937;321938;321939;321940;321941;321942;321943;321944;321945;321946;321947 255019;255020;255021;255022;255023;255024;255025;255026;255027;255028;255029;255030;255031 255025 13 NQVTQLK Unmodified 829.46577 0.46576654 953 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 15.465 15.024 2 0.043924 14775 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 67.035 22.062 1450500000 49699000 929520000 0 16812000 20440000 38063000 0 34083000 37443000 35145000 56559000 38752000 50671000 57211000 86142000 38607 953 34431 321948;321949;321950;321951;321952;321953;321954;321955;321956;321957;321958;321959;321960 255032;255033 255033 1 NQVVHVPLEAYDSSLPLIK Unmodified 2121.147 0.14700517 5247 Q9Y5S2 CDC42BPB Serine/threonine-protein kinase MRCK beta yes yes 0 0 0 By MS/MS 10 0 1 1 86.191 86.359 3 0.00081277 99854 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.094 39.384 5259500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5259500 38608 5247 34432 321961 255034 255034 1 NQWIDNVEK Unmodified 1144.5513 0.55128709 1073 P18206 VCL Vinculin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 50.426 48.872 2 0.0030491 54337 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.783 80.917 753540000 21019000 455510000 7363200 14041000 6248900 29657000 11402000 14005000 0 19914000 40851000 0 24625000 26273000 82630000 38609 1073 34433 321962;321963;321964;321965;321966;321967;321968;321969;321970;321971;321972;321973;321974;321975 255035;255036;255037;255038;255039;255040;255041;255042;255043;255044;255045;255046;255047 255038 12 NQWQLSADDLK Unmodified 1316.6361 0.63607935 888 P09543 CNP 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.484 67.567 2 0.00057718 77376 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 80.688 66.482 154300000 0 0 0 7697200 6527600 17256000 8729800 10663000 8526100 13647000 21249000 16359000 12491000 9755100 21403000 38610 888 34434 321976;321977;321978;321979;321980;321981;321982;321983;321984;321985;321986;321987 255048;255049;255050;255051;255052;255053;255054;255055;255056;255057;255058;255059;255060;255061 255050 14 NQWQLSADDLKK Unmodified 1444.731 0.73104237 888 P09543 CNP 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 56.339 56.346 3 0.0034789 63979 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 46.069 37.369 49295000 0 0 0 6272400 4983000 0 7444500 7029100 0 5754500 0 9529200 8282200 0 0 38611 888 34435 321988;321989;321990;321991;321992;321993;321994 255062;255063;255064 255062 3 NQWVNLNEPEEEK Unmodified 1627.7478 0.74781464 242 O15027 SEC16A Protein transport protein Sec16A yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 1 1 6 2 1 1 1 1 1 1 61.529 60.001 2 0.0016207 75991 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.171 60.967 92035000 0 58136000 0 3527100 0 0 6720800 6125900 6025400 0 0 0 0 11500000 0 38612 242 34436 321995;321996;321997;321998;321999;322000;322001;322002 255065;255066;255067;255068 255065 4 NQYDNDVTVWSPQGR Unmodified 1777.802 0.80197548 1193 P25786 PSMA1 Proteasome subunit alpha type-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 2 1 1 1 1 1 1 2 2 1 2 2 64.105 64.22 2;3 1.4895E-27 73377 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 169.89 152.98 276110000 0 0 0 20024000 7216300 13584000 8522700 9977600 11258000 15648000 41152000 31051000 8397500 21157000 88122000 38613 1193 34437 322003;322004;322005;322006;322007;322008;322009;322010;322011;322012;322013;322014;322015;322016;322017;322018;322019 255069;255070;255071;255072;255073;255074;255075;255076;255077;255078;255079;255080;255081;255082 255080 14 NQYNTTGPQK Unmodified 1149.5415 0.54145068 5369 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 2 2 2 1 2 2 2 2 2 2 2 48.811 49.004 2 0.0037884 54365 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.213 48.611 + 978980000 0 0 0 74454000 48161000 71179000 50731000 29001000 45630000 129730000 124930000 83830000 195360000 77415000 48558000 38614 5369 34438 322020;322021;322022;322023;322024;322025;322026;322027;322028;322029;322030;322031;322032;322033;322034;322035;322036;322037;322038;322039;322040;322041 255083;255084;255085;255086;255087;255088;255089;255090;255091;255092;255093;255094;255095 255086 12 NQYVPYPHAPGSQR Unmodified 1612.7746 0.77463852 2215 Q12965 MYO1E Unconventional myosin-Ie yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.941 44.09 3 0.00089345 48631 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 47.532 36.092 254610000 0 0 0 14397000 15731000 24377000 30092000 21397000 17942000 19994000 0 25115000 32660000 14430000 38473000 38615 2215 34439 322042;322043;322044;322045;322046;322047;322048;322049;322050;322051;322052;322053 255096;255097;255098;255099;255100;255101;255102;255103 255100 8 NRAAAMANNLQK Unmodified 1300.667 0.66700232 2410 Q14498 RBM39 RNA-binding protein 39 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 2 21.45 21.108 2;3 0.0013039 21550 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 51.841 37.155 76615000 3620800 0 0 4452100 0 3791500 0 7355100 3449600 7905400 17025000 0 6909900 7219300 14885000 38616 2410 34440 322054;322055;322056;322057;322058;322059;322060;322061;322062;322063;322064 255104;255105;255106;255107;255108 255104 5 NRAEQLASVQYTLPK Unmodified 1716.9159 0.91588303 2136 Q07157 TJP1 Tight junction protein ZO-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 63.91 63.243 3 0.00065093 72065 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 60.317 51.932 100350000 13631000 0 0 0 6423700 13311000 0 6292700 6575500 0 9074600 11997000 8335000 9235000 15477000 38617 2136 34441 322065;322066;322067;322068;322069;322070;322071;322072;322073;322074 255109;255110;255111;255112;255113;255114;255115 255109 7 NRAEQWNVNYVETSAK Unmodified 1907.9126 0.91258856 940 P11233 RALA Ras-related protein Ral-A yes yes 0 0 1 By MS/MS 2 0 1 1 63.971 55.692 3 0.012952 74950 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 26.837 16.498 17205000 17205000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38618 940 34442 322075 255116 255116 1 NRCDPETITSAGSSLLDSNVTK Unmodified 2364.1227 0.12271727 2970 Q6T4R5 NHS Nance-Horan syndrome protein yes yes 0 0 1 By MS/MS 2 0 1 1 75.735 72.972 3 0.00011724 88946 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 61.222 53.418 3081000 0 0 3081000 0 0 0 0 0 0 0 0 0 0 0 0 38619 2970 34443 322076 255117;255118 255118 2 NRDFSLPVPK Unmodified 1171.635 0.63495714 245 O15047 SETD1A Histone-lysine N-methyltransferase SETD1A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 60.087 60.203 3 0.010469 67933 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 41.399 32.217 55145000 0 0 0 2435300 3472400 0 3640000 3146900 3782800 5644500 4166300 10174000 5413100 5384800 7885100 38620 245 34444 322077;322078;322079;322080;322081;322082;322083;322084;322085;322086;322087 255119;255120;255121;255122;255123;255124 255122 6 NRDHDTFLAVR Unmodified 1342.6742 0.67419619 2208 Q12907 LMAN2 Vesicular integral-membrane protein VIP36 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 36.144 36.882 3 0.0067206 39454 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.978 39.72 47081000 0 0 0 0 0 0 0 0 0 0 0 21552000 0 0 25529000 38621 2208 34445 322088;322089 255125;255126 255125 2 NRDYPLASK Unmodified 1062.5458 0.54580778 964;1114 P12268;P20839 IMPDH2;IMPDH1 Inosine-5'-monophosphate dehydrogenase 2;Inosine-5'-monophosphate dehydrogenase 1 no no 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 22.875 18.941 2 6.1641E-05 26910 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 154.85 78.372 1023800000 802400000 74248000 147150000 0 0 0 0 0 0 0 0 0 0 0 0 38622 964;1114 34446 322090;322091;322092 255127 255127 1 NREASLGEASK Unmodified 1160.5786 0.57856447 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 5.77 3.93 6 1 6 2 3 2 1 1 1 1 1 1 10.416 8.7624 2;3 1.614E-08 11420 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 160.67 92.304 398240000 44217000 99636000 219670000 0 425310 314510 0 0 0 4391300 15789000 0 0 4750500 9040100 38623 2047 34447 322093;322094;322095;322096;322097;322098;322099;322100;322101;322102;322103;322104;322105 255128;255129;255130;255131;255132;255133;255134;255135;255136 255136 7 NREEFEDQSLEK Unmodified 1522.69 0.68996541 2195 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.47 2 1 14 1 1 1 2 1 1 1 1 1 1 1 1 2 31.287 31.262 2;3 1.3859E-05 39463 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 89.231 79.431 101460000 0 0 7684300 4935900 4814000 14321000 6944700 6365900 4386400 6339700 8821000 11128000 6668000 4952500 14102000 38624 2195 34448 322106;322107;322108;322109;322110;322111;322112;322113;322114;322115;322116;322117;322118;322119;322120 255137;255138;255139;255140;255141;255142;255143;255144;255145;255146;255147;255148;255149;255150 255146 13 NREELGFRPEYSASQLK Unmodified 2023.0123 0.012302606 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 2 16 2 2 1 2 1 2 2 2 1 2 1 57.836 57.146 3;4 3.9178E-26 79269 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 126.07 104.24 662070000 162820000 0 0 0 0 62246000 10053000 52941000 25793000 36054000 43341000 81090000 25414000 66157000 96170000 38625 894 34449 322121;322122;322123;322124;322125;322126;322127;322128;322129;322130;322131;322132;322133;322134;322135;322136;322137;322138 255151;255152;255153;255154;255155;255156;255157;255158;255159;255160;255161;255162;255163;255164;255165;255166 255156 12 NREILDESLR Unmodified 1243.6521 0.65206377 3549 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.63 42.806 3 0.0034739 47526 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 59.418 49.229 161520000 0 0 0 11404000 6262000 25283000 11618000 7369200 7054300 18544000 14812000 14614000 11556000 12839000 20164000 38626 3549 34450 322139;322140;322141;322142;322143;322144;322145;322146;322147;322148;322149;322150 255167;255168;255169;255170;255171;255172;255173;255174;255175;255176;255177 255168 9 NRELEEELRK Unmodified 1314.6892 0.68917755 391 O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes yes 0 0 2 By MS/MS 2 0 1 1 30.813 25.094 3 0.01658 35214 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.276 58.795 57853000 57853000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38627 391 34451 322151 255178 255178 1 NRENVMEDFLK Unmodified 1393.666 0.66599927 433 O60825 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 69.924 70.049 3 0.0052469 80474 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 41.48 33.87 72550000 0 0 0 3024400 0 9812900 4448600 7092900 4699100 5272500 4744200 6880500 5240300 6614200 14721000 38628 433 34452 322152;322153;322154;322155;322156;322157;322158;322159;322160;322161;322162 255179;255180 255180 2 NREPLMPSPQFIK Unmodified 1555.8181 0.81808324 590 O94826 TOMM70A Mitochondrial import receptor subunit TOM70 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 70.517 70.78 3 0.010551 80740 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.025 27.528 19831000 0 0 0 0 0 0 0 3069500 1387900 0 2917800 4901400 0 1150000 6404500 38629 590 34453 322163;322164;322165;322166;322167;322168 255181 255181 1 NREPVQLETLSIR Unmodified 1553.8526 0.85255449 1893 P62314 SNRPD1 Small nuclear ribonucleoprotein Sm D1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 66.821 66.904 2;3 1.3729E-11 76849 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 101.62 98.527 1260500000 0 0 0 37931000 41653000 94124000 82427000 95102000 90696000 123990000 113870000 161350000 69255000 106330000 243750000 38630 1893 34454 322169;322170;322171;322172;322173;322174;322175;322176;322177;322178;322179;322180;322181;322182;322183;322184;322185;322186;322187;322188;322189;322190;322191;322192 255182;255183;255184;255185;255186;255187;255188;255189;255190;255191;255192;255193;255194;255195;255196;255197;255198 255190 17 NRETHEIVALK Unmodified 1308.715 0.71499837 2036 Q00535 CDK5 Cyclin-dependent-like kinase 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 30.324 29.505 3 0.00033834 44300 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.604 79.662 348460000 222800000 0 4118900 0 0 19718000 5219100 8117100 9623700 22577000 20922000 0 18197000 17162000 0 38631 2036 34455 322193;322194;322195;322196;322197;322198;322199;322200;322201;322202 255199;255200;255201;255202;255203;255204;255205 255202 6 NRFGAQQDTIEVPEK Unmodified 1730.8588 0.85876208 1590 P49736 MCM2 DNA replication licensing factor MCM2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 3 15 2 1 1 1 2 2 1 1 2 1 1 1 1 1 48.967 47.968 2;3 6.9741E-19 53747 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 106.42 98.643 358090000 41985000 0 8971900 7068700 7487600 29097000 21166000 13363000 11317000 35098000 30975000 33405000 24798000 26966000 66398000 38632 1590 34456 322203;322204;322205;322206;322207;322208;322209;322210;322211;322212;322213;322214;322215;322216;322217;322218;322219;322220 255206;255207;255208;255209;255210;255211;255212;255213;255214;255215;255216;255217;255218;255219;255220;255221 255207 15 NRFQGQPDIYK Unmodified 1364.6837 0.68369824 3994 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 36.622 36.26 3 0.00027553 51387 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.744 55.698 263350000 115750000 0 0 11559000 7408300 10679000 12724000 12908000 8910000 13074000 9982900 16073000 14065000 14556000 15657000 38633 3994 34457 322221;322222;322223;322224;322225;322226;322227;322228;322229;322230;322231;322232;322233 255222;255223;255224;255225;255226;255227;255228;255229;255230;255231;255232;255233 255230 12 NRFQNISEK Unmodified 1134.5782 0.57817054 3646 Q92636 NSMAF Protein FAN yes yes 0 0 1 By MS/MS 2 0 1 1 24.602 19.524 2 0.038314 27801 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.431 43.273 15151000 15151000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38634 3646 34458 322234 255234 255234 0 NRGVDLQENNPASR Unmodified 1568.7655 0.76553039 1646 P51148 RAB5C Ras-related protein Rab-5C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.997 27.194 3 0.036491 28300 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 29.077 15.348 352950000 0 0 0 13005000 12430000 16848000 29122000 19075000 22027000 32551000 50398000 58656000 38763000 27212000 32865000 38635 1646 34459 322235;322236;322237;322238;322239;322240;322241;322242;322243;322244;322245;322246 255235 255235 1 NRHPNFLVVEK Unmodified 1351.7361 0.73606817 2639 Q16864 ATP6V1F V-type proton ATPase subunit F yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 41.877 42.097 3 0.0002902 47361 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 71.085 54.142 37818000 0 0 0 0 0 8711000 6181500 1919100 3031600 4247500 0 0 0 0 13727000 38636 2639 34460 322247;322248;322249;322250;322251;322252 255236 255236 1 NRLENDGATALAEAFR Unmodified 1746.8649 0.86491009 1495 P46060 RANGAP1 Ran GTPase-activating protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 75.121 75.285 3 0.0077795 86154 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.127 29.72 52343000 0 0 0 0 0 3409300 0 0 0 5264800 3817100 5958000 0 3297100 30597000 38637 1495 34461 322253;322254;322255;322256;322257;322258 255237;255238;255239;255240 255238 2 NRLNNSLHFAQVR Unmodified 1567.8332 0.83315645 2465 Q14CX7 NAA25 N-alpha-acetyltransferase 25, NatB auxiliary subunit yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 2 2 47.098 47.224 3;4 0.002105 52679 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 57.175 47.375 71225000 0 0 0 0 0 6500900 2847900 28384000 33492000 0 0 0 0 0 0 38638 2465 34462 322259;322260;322261;322262;322263;322264 255241;255242;255243;255244 255242 1 NRLPEEEENHK Unmodified 1393.6586 0.65860571 5191 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 8.5936 8.7218 3 0.00043761 7381 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 60.691 56.974 53313000 0 0 0 3722400 3504700 2667900 3055100 1892700 2879300 4906000 10561000 7597400 4509400 3825500 4191000 38639 5191 34463 322265;322266;322267;322268;322269;322270;322271;322272;322273;322274;322275;322276 255245;255246;255247;255248;255249;255250;255251;255252 255251 7 NRLVVTNLDK Unmodified 1170.6721 0.67207093 5094 Q9Y2A7 NCKAP1 Nck-associated protein 1 yes yes 0 0 1 By MS/MS 2 0 2 2 48.478 40.763 2;3 0.00021163 56676 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 190.96 124.34 105360000 105360000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38640 5094 34464 322277;322278 255253;255254 255254 0 NRLYTNSH Unmodified 1003.4835 0.48354187 319 O43324 EEF1E1 Eukaryotic translation elongation factor 1 epsilon-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 10.796 7.6685 2 0.040909 12116 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 161.9 150.18 530040000 509920000 15403000 4721700 0 0 0 0 0 0 0 0 0 0 0 0 38641 319 34465 322279;322280;322281 255255 255255 0 NRMDGTYACSYTPVK Unmodified 1761.7814 0.78143973 487 O75369 FLNB Filamin-B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 48.713 42.913 3 0.00039489 59068 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.842 76.867 137900000 107580000 19579000 10744000 0 0 0 0 0 0 0 0 0 0 0 0 38642 487 34466 322282;322283;322284 255256 255256 1 NRMDGTYACSYTPVK Oxidation (M) 1777.7764 0.77635436 487 O75369 FLNB Filamin-B yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 40.19 35.116 3 0.00028428 48238 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.387 58.156 92881000 62320000 15277000 15283000 0 0 0 0 0 0 0 0 0 0 0 0 38643 487 34466 322285;322286;322287 255257 255257 622 0 NRNEQESAVHPR Unmodified 1435.6916 0.69163717 4940 Q9UJU6 DBNL Drebrin-like protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.3933 6.518 3 2.3206E-09 4725 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 142.97 135.31 223850000 0 0 0 10229000 10041000 11961000 11585000 11551000 14060000 17850000 30579000 25836000 21823000 24710000 33623000 38644 4940 34467 322288;322289;322290;322291;322292;322293;322294;322295;322296;322297;322298;322299 255258;255259;255260;255261;255262;255263;255264;255265;255266;255267;255268;255269 255263 12 NRNFTVEK Unmodified 1006.5196 0.51959303 1073 P18206 VCL Vinculin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 19.636 16.041 2 0.03437 23509 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 125.31 41.562 1187000000 1091000000 68400000 27607000 0 0 0 0 0 0 0 0 0 0 0 0 38645 1073 34468 322300;322301;322302 255270 255270 0 NRPAPYSRPK Unmodified 1184.6414 0.6414395 3162 Q86V81 ALYREF THO complex subunit 4 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.5631 7.6903 3 2.5965E-07 6186 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 131.09 119.87 2664300000 0 0 0 94606000 122800000 129010000 152180000 165610000 194420000 221540000 606110000 405150000 199950000 137910000 235020000 38646 3162 34469 322303;322304;322305;322306;322307;322308;322309;322310;322311;322312;322313;322314 255271;255272;255273;255274;255275;255276;255277;255278;255279;255280 255279 8 NRPDYVSEEEEDDEDFETAVK Unmodified 2515.0511 0.051051695 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 1 By MS/MS 2 0 1 1 68.21 59.915 3 4.943E-10 80003 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.872 84.422 26495000 26495000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38647 1601 34470 322315 255281;255282 255281 2 NRPEAFPTAEDIFAK Unmodified 1704.8471 0.84713476 3709 Q93074 MED12 Mediator of RNA polymerase II transcription subunit 12 yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 76.246 76.386 3 0.013555 87686 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.277 30.253 31550000 0 0 0 0 0 5286500 0 3076400 0 3280300 0 6676400 3044100 4149500 6036900 38648 3709 34471 322316;322317;322318;322319;322320;322321;322322 255283;255284 255283 1 NRPEDYQGGR Unmodified 1190.5428 0.54284767 2496 Q15084 PDIA6 Protein disulfide-isomerase A6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 7.2372 7.3385 3 0.0013535 4781 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.044 62.599 116150000 0 0 0 9848500 5475800 9993200 8318000 0 7149200 9240200 0 13542000 6375900 8959800 37247000 38649 2496 34472 322323;322324;322325;322326;322327;322328;322329;322330;322331;322332 255285;255286;255287;255288;255289 255287 4 NRPLSDEELDAMFPEGYK Oxidation (M) 2125.9626 0.9626348 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 2 1 1 1 1 1 1 1 69.76 69.838 3 9.4558E-16 80423 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 96.487 91.777 278500000 0 0 0 8504200 11533000 21285000 0 26346000 15861000 26264000 31868000 42286000 20061000 23817000 50678000 38650 516 34473 322333;322334;322335;322336;322337;322338;322339;322340;322341;322342;322343;322344 255290;255291;255292;255293;255294;255295;255296;255297;255298;255299;255300;255301;255302;255303;255304;255305;255306;255307;255308;255309;255310;255311 255300 673 22 NRPLSDEELDAMFPEGYK Unmodified 2109.9677 0.96772018 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 1 By MS/MS 10 0 1 1 79.623 79.852 3 0.00076857 91733 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.036 45.397 8062500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8062500 38651 516 34473 322345 255312 255312 1 NRPNRLIVDEAINEDNSVVSLSQPK Unmodified 2806.4573 0.45733371 1755 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 0 2 By MS/MS 2.5 0.5 1 1 2 80.698 74.752 4 4.3804E-92 96395 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 122.73 111.21 52484000 52484000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38652 1755 34474 322346;322347 255313;255314 255314 2 NRPPFGQGYTQPGPGYR Unmodified 1890.9125 0.91252898 3654 Q92734 TFG Protein TFG yes yes 0 0 1 By MS/MS 10 0 1 1 48.499 49.222 3 0.00033073 54308 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.973 53.356 23123000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23123000 38653 3654 34475 322348 255315 255315 1 NRPPGAADNTAWAVMTPQELWK Oxidation (M) 2468.1907 0.19067768 465 O75153 CLUH Clustered mitochondria protein homolog yes yes 0 1 1 By MS/MS 2 0 1 1 86.138 78.008 3 5.3156E-20 101699 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.71 98.508 12268000 12268000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38654 465 34476 322349 255316 255316 591 1 NRPPGAADNTAWAVMTPQELWK Unmodified 2452.1958 0.19576305 465 O75153 CLUH Clustered mitochondria protein homolog yes yes 0 0 1 By MS/MS 2 0 1 1 92.934 84.803 3 0.00031097 109833 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.602 55.735 9451200 9451200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38655 465 34476 322350 255317 255317 1 NRPPLPAGTNSK Unmodified 1250.6731 0.67313356 1446;1447 P42166;P42167 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 25 2 2 2 2 3 2 2 2 2 2 2 2 20.644 20.846 2;3 2.6148E-11 21844 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 133.23 97.782 1630700000 0 0 0 82253000 87270000 105710000 128760000 121960000 91080000 132560000 182950000 212950000 164240000 121740000 199240000 38656 1446;1447 34477 322351;322352;322353;322354;322355;322356;322357;322358;322359;322360;322361;322362;322363;322364;322365;322366;322367;322368;322369;322370;322371;322372;322373;322374;322375 255318;255319;255320;255321;255322;255323;255324;255325;255326;255327;255328;255329;255330;255331;255332;255333;255334;255335;255336;255337 255337 16 NRPTSISWDGLDSGK Unmodified 1631.7903 0.79034816 1269 P30086 PEBP1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.86 3.96 10 1 10 8 1 2 1 1 2 2 2 2 62.213 59.203 2;3 3.297E-40 80873 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 187.97 167.19 3942000000 3128600000 282240000 137400000 14796000 0 0 0 4996200 0 0 55768000 68574000 0 41638000 208000000 38657 1269 34478 322376;322377;322378;322379;322380;322381;322382;322383;322384;322385;322386;322387;322388;322389;322390;322391;322392;322393;322394;322395;322396 255338;255339;255340;255341;255342;255343;255344;255345;255346;255347;255348;255349;255350;255351;255352;255353;255354;255355;255356;255357;255358;255359;255360;255361;255362;255363;255364;255365;255366;255367;255368 255355 29 NRQAEQLVFPLEK Unmodified 1570.8467 0.84674083 4189 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 77.292 71.803 3 0.017512 93469 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 32.925 24.128 31848000 28423000 0 3424500 0 0 0 0 0 0 0 0 0 0 0 0 38658 4189 34479 322397;322398 255369;255370 255369 2 NRQCQQNLDAASK Unmodified 1531.7161 0.71613736 5278 Q9Y6D9 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9.0378 8.7052 3 1.0422E-15 5987 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 117.03 109.66 133050000 5084400 0 1007500 6094200 4707400 5188100 6947700 5122500 6436600 9800500 25882000 16990000 11282000 10565000 17945000 38659 5278 34480 322399;322400;322401;322402;322403;322404;322405;322406;322407;322408;322409;322410;322411;322412 255371;255372;255373;255374;255375;255376;255377;255378;255379;255380;255381;255382;255383 255377 9 NRQEYDALAK Unmodified 1206.5993 0.59929991 2881 Q6I9Y2 THOC7 THO complex subunit 7 homolog yes yes 0 0 1 By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 21.48 21.657 3 0.040714 22723 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 26.579 13.226 114070000 0 0 0 7973900 6730800 10032000 9246400 6821000 8500500 12300000 0 13315000 14496000 10737000 13917000 38660 2881 34481 322413;322414;322415;322416;322417;322418;322419;322420;322421;322422;322423 255384 255384 1 NRQEYEDIAVK Unmodified 1363.6732 0.67319314 271 O15294 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 6 12 1 2 3 1 1 1 1 1 1 1 1 1 1 1 1 35.193 33.82 2;3 9.5458E-05 44363 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.4 68.985 417040000 6400100 126480000 69768000 10384000 11103000 16179000 11685000 13491000 15030000 20104000 24171000 28376000 21775000 18187000 23906000 38661 271 34482 322424;322425;322426;322427;322428;322429;322430;322431;322432;322433;322434;322435;322436;322437;322438;322439;322440;322441 255385;255386;255387;255388;255389;255390;255391;255392;255393;255394;255395;255396;255397;255398 255387 13 NRQSDENNLK Unmodified 1216.5796 0.5796271 4417 Q9H6K1 C6orf106 Uncharacterized protein C6orf106 yes yes 0 0 1 By MS/MS 2 0 2 2 5.705 3.4999 2;3 0.035186 5070 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 41.824 27.157 40678000 0 0 40678000 0 0 0 0 0 0 0 0 0 0 0 0 38662 4417 34483 322442;322443 255399;255400 255400 2 NRQTFLLQTTK Unmodified 1348.7463 0.7462985 583 O94776 MTA2 Metastasis-associated protein MTA2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 2 2 2 2 2 2 2 2 1 2 2 44.876 45.073 2;3 0.0056104 50449 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 40.516 33.137 330530000 0 0 0 12991000 18922000 33151000 34862000 23111000 28762000 34516000 34737000 34817000 9381700 25486000 39791000 38663 583 34484 322444;322445;322446;322447;322448;322449;322450;322451;322452;322453;322454;322455;322456;322457;322458;322459;322460;322461;322462;322463;322464;322465 255401;255402;255403;255404;255405;255406 255403 4 NRSAEEGELAESK Unmodified 1418.6638 0.66375066 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 2 1 2 1 1 2 2 2 2 2 2 13.609 13.796 2;3 0.00020313 12734 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 67.136 53.457 104810000 0 0 0 4687100 6760900 5333900 7187800 6029900 4824800 11009000 11145000 13098000 12048000 9197500 13491000 38664 4285 34485 322466;322467;322468;322469;322470;322471;322472;322473;322474;322475;322476;322477;322478;322479;322480;322481;322482;322483;322484;322485 255407;255408;255409;255410;255411;255412;255413;255414;255415 255411 7 NRSLADFEK Unmodified 1078.5407 0.5407224 129 O00231 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 39.396 34.34 2 0.033489 42954 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 114.97 67.225 623040000 594930000 0 28106000 0 0 0 0 0 0 0 0 0 0 0 0 38665 129 34486 322486;322487 255416;255417 255417 1 NRSNTPILVDGK Unmodified 1312.7099 0.709913 829 P06744 GPI Glucose-6-phosphate isomerase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 2 33.06 31.936 2;3 0.0055311 33016 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.286 40.461 51772000 7310600 0 0 0 0 0 0 0 0 0 0 7900100 0 0 36561000 38666 829 34487 322488;322489;322490;322491 255418;255419;255420;255421 255418 4 NRSPADAGRGVDEAPSSTLK Unmodified 2027.0032 0.0031944826 3006 Q6ZRS2 SRCAP Helicase SRCAP yes yes 0 0 2 By MS/MS By matching 2 0 2 1 1 36.171 31.25 3 0.0079527 43418 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 37.112 22.153 13739000 12268000 0 1471200 0 0 0 0 0 0 0 0 0 0 0 0 38667 3006 34488 322492;322493 255422;255423 255423 2 NRTAELLAK Unmodified 1014.5822 0.58219329 3618 Q92541 RTF1 RNA polymerase-associated protein RTF1 homolog yes yes 0 0 1 By MS/MS 2 0 1 1 30.912 25.193 2 0.032879 35338 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 109.71 30.24 336170000 336170000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38668 3618 34489 322494 255424 255424 1 NRTPYVTTTVSAHSAK Unmodified 1731.8904 0.89039656 4126 Q9BSJ2 TUBGCP2 Gamma-tubulin complex component 2 yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 2 1 1 1 1 1 1 28.631 28.221 3 7.1728E-05 29816 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 74.772 66.387 73196000 10958000 0 0 0 1479800 6786900 3371500 4955800 3231600 10921000 8669700 10052000 6093400 6676800 0 38669 4126 34490 322495;322496;322497;322498;322499;322500;322501;322502;322503;322504;322505;322506 255425;255426;255427;255428;255429;255430;255431;255432;255433;255434;255435 255430 11 NRTQEQCVHNETK Unmodified 1642.7482 0.74816577 394 O60313 OPA1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes yes 0 0 1 By MS/MS 2 0 1 1 6.4143 2.9821 3 2.7918E-33 5950 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 143.93 96.888 23033000 23033000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38670 394 34491 322507 255436;255437 255437 2 NRVAILAELDK Unmodified 1240.7139 0.71393574 4614 Q9NRY2 INIP SOSS complex subunit C yes yes 0 0 1 By MS/MS 2 0 1 1 77.955 69.824 3 0.038983 91906 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 31.348 16.448 13148000 13148000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38671 4614 34492 322508 255438 255438 1 NRVGPQVPLSEPGFR Unmodified 1651.8794 0.87943794 4423 Q9H6S3 EPS8L2 Epidermal growth factor receptor kinase substrate 8-like protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.101 64.192 3 0.0004809 72730 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 62.287 50.122 128060000 0 0 0 6428000 4711500 14062000 10616000 6241200 4927800 17379000 8341100 15436000 9601400 9030000 21286000 38672 4423 34493 322509;322510;322511;322512;322513;322514;322515;322516;322517;322518;322519;322520 255439;255440;255441;255442;255443;255444;255445;255446;255447;255448;255449 255445 10 NRVIGSGCNLDSAR Unmodified 1517.7369 0.7368728 719 P00338;Q6ZMR3 LDHA;LDHAL6A L-lactate dehydrogenase A chain;L-lactate dehydrogenase A-like 6A yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 28.778 29.077 3 4.6403E-20 30401 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 131.08 123.36 437920000 0 0 0 11653000 0 0 0 7004500 8998300 10181000 99338000 30505000 11771000 106450000 152020000 38673 719 34494 322521;322522;322523;322524;322525;322526;322527;322528;322529 255450;255451;255452;255453 255450 1 NRVPSAGDVEK Unmodified 1170.5993 0.59929991 2577 Q15785 TOMM34 Mitochondrial import receptor subunit TOM34 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 4 24 2 2 2 2 2 2 2 2 2 2 2 2 2 2 18.801 18.413 2;3 2.5859E-12 18973 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 152.54 106.11 1093600000 165640000 0 284420000 45311000 58880000 58836000 45097000 43831000 41535000 56798000 65033000 60003000 45702000 39495000 82974000 38674 2577 34495 322530;322531;322532;322533;322534;322535;322536;322537;322538;322539;322540;322541;322542;322543;322544;322545;322546;322547;322548;322549;322550;322551;322552;322553;322554;322555;322556;322557 255454;255455;255456;255457;255458;255459;255460;255461;255462;255463;255464;255465;255466;255467;255468;255469;255470;255471;255472;255473;255474;255475;255476;255477;255478;255479;255480;255481;255482;255483 255483 21 NRVVQSGIK Unmodified 999.58253 0.58252764 3912 Q96KQ7 EHMT2 Histone-lysine N-methyltransferase EHMT2 yes yes 0 0 1 By MS/MS 2 0 1 1 16.607 12.397 2 0.031058 18309 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 123.21 66.161 17881000 17881000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38675 3912 34496 322558 255484 255484 0 NRWDETPK Unmodified 1044.4989 0.49885759 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 22.895 18.96 2 0.029852 26792 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 130.22 118.85 164970000 138370000 10339000 16253000 0 0 0 0 0 0 0 0 0 0 0 0 38676 516 34497 322559;322560;322561 255485 255485 0 NRYENVIIPR Unmodified 1272.6939 0.693869 3915 Q96L91 EP400 E1A-binding protein p400 yes yes 0 0 1 By MS/MS 10 0 1 1 49.149 49.315 3 0.038293 55764 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 50.292 32.856 6601900 0 0 0 0 0 0 0 6601900 0 0 0 0 0 0 0 38677 3915 34498 322562 255486 255486 0 NRYQLEIPENFTTR Unmodified 1779.8904 0.89039656 1694 P52701 MSH6 DNA mismatch repair protein Msh6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 74.648 74.832 3 0.0017998 85875 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.155 37.322 43281000 0 0 0 0 0 4809200 0 5739800 4642400 0 3858600 4659500 0 2699000 16873000 38678 1694 34499 322563;322564;322565;322566;322567;322568;322569 255487;255488;255489 255488 3 NRYVLEDGPEEDRK Unmodified 1718.8224 0.82237657 2582 Q15813 TBCE Tubulin-specific chaperone E yes yes 0 0 2 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.36 2.17 2 23 1 1 2 2 2 2 2 2 2 1 2 2 2 2 30.709 30.477 3;4 4.0954E-11 32108 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 81.632 71.435 203410000 26705000 0 4608100 7962000 5949700 18433000 13728000 13509000 13698000 17315000 6233700 16474000 20896000 19274000 18629000 38679 2582 34500 322570;322571;322572;322573;322574;322575;322576;322577;322578;322579;322580;322581;322582;322583;322584;322585;322586;322587;322588;322589;322590;322591;322592;322593;322594 255490;255491;255492;255493;255494;255495;255496;255497;255498;255499;255500;255501 255499 11 NSAAEIPVTSNGEVDDSREHSFNR Unmodified 2630.1957 0.19569929 1712 P53367 ARFIP1 Arfaptin-1 yes yes 0 0 1 By MS/MS 10 0 1 1 49.218 49.941 3 3.1315E-05 55425 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.171 35.009 8963500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8963500 38680 1712 34501 322595 255502 255502 1 NSAAEIPVTSNGEVDDSREHSFNRDLK Unmodified 2986.4017 0.40166932 1712 P53367 ARFIP1 Arfaptin-1 yes yes 0 0 2 By MS/MS 2 0 1 1 62.255 53.999 4 7.9675E-30 73053 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 92.463 87.095 18690000 18690000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38681 1712 34502 322596 255503;255504 255504 2 NSAEGTEYFK Unmodified 1144.5037 0.50366819 2652 Q2M389 KIAA1033 WASH complex subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 33.025 33.266 2 0.0068766 36298 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 100.02 85.86 25901000 0 0 0 0 0 3762600 6494500 0 4113400 0 0 0 0 4322100 7208700 38682 2652 34503 322597;322598;322599;322600;322601;322602;322603 255505;255506;255507;255508;255509 255508 5 NSAELTVIK Unmodified 973.54441 0.5444108 413 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 43.717 43.698 2 0.023307 49050 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 51.113 6.0317 34354000 0 0 0 7978000 0 0 9562700 0 7996500 0 0 0 0 8817000 0 38683 413 34504 322604;322605;322606;322607 255510;255511 255510 2 NSAFESLYQDK Unmodified 1300.5935 0.59354583 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 58.726 58.706 2 0.0012794 66420 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 73.841 49.886 220260000 0 0 0 16192000 22604000 29894000 23449000 27125000 26335000 34597000 40065000 0 0 0 0 38684 528 34505 322608;322609;322610;322611;322612;322613;322614;322615;322616;322617 255512;255513;255514;255515;255516;255517;255518;255519 255516 8 NSAHSAGVGAIFDR Unmodified 1400.6797 0.6796755 1237;1095 P19793;P28702 RXRA;RXRB Retinoic acid receptor RXR-alpha;Retinoic acid receptor RXR-beta no no 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 50.921 51.061 3 0.0065244 56362 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 29.618 24.439 64874000 0 0 0 0 10952000 0 0 18320000 0 0 0 0 0 15258000 20345000 38685 1095;1237 34506 322618;322619;322620;322621 255520;255521;255522;255523 255520 3 NSALSAQLR Unmodified 958.51959 0.51959303 1528 P47897 QARS Glutamine--tRNA ligase yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 33.256 33.457 2 0.012756 36914 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 60.828 36.978 180100000 0 0 0 11471000 11612000 0 12544000 10339000 7393400 20886000 21790000 18405000 20891000 19596000 25169000 38686 1528 34507 322622;322623;322624;322625;322626;322627;322628;322629;322630;322631;322632 255524;255525;255526;255527;255528 255524 2 NSAPLPGEQPLQLFVENPSEEDAAIVDK Unmodified 3006.4822 0.48221106 2670 Q3L8U1 CHD9 Chromodomain-helicase-DNA-binding protein 9 yes yes 0 0 0 By MS/MS 3 0 1 1 94.887 91.631 3 0.0046388 109811 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 26.422 24.046 2790000 0 2790000 0 0 0 0 0 0 0 0 0 0 0 0 0 38687 2670 34508 322633 255529 255529 1 NSAQGNVYVK Unmodified 1078.5407 0.5407224 2410 Q14498 RBM39 RNA-binding protein 39 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18.065 17.626 2 0.00054294 16328 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 123.98 104.21 353690000 4310000 29059000 0 13678000 13969000 21550000 17868000 17884000 15758000 28992000 26188000 58584000 34579000 29757000 41513000 38688 2410 34509 322634;322635;322636;322637;322638;322639;322640;322641;322642;322643;322644;322645;322646;322647 255530;255531;255532;255533;255534;255535;255536;255537;255538;255539;255540;255541;255542;255543;255544;255545 255539 15 NSASATTPLSGNSSR Unmodified 1448.6855 0.68554874 5259 Q9Y608 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 22.526 23.027 2 0.030418 23202 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.452 38.356 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38689 5259 34510 322648;322649 255546;255547 255546 2 NSASVQNSSVAVLSVNHIK Unmodified 1953.028 0.02795267 472 O75179 ANKRD17 Ankyrin repeat domain-containing protein 17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 63.373 62.839 3 1.003E-09 85106 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.08 66.98 132630000 28598000 0 0 0 4723900 7507000 4752600 12513000 4939200 14078000 12013000 11713000 5876000 8551200 17364000 38690 472 34511 322650;322651;322652;322653;322654;322655;322656;322657;322658;322659;322660;322661 255548;255549;255550;255551;255552;255553;255554;255555;255556;255557;255558;255559;255560 255553 13 NSATSADEQPHIGNYR Unmodified 1758.7921 0.79213907 3040 Q7KZI7 MARK2 Serine/threonine-protein kinase MARK2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 33.456 33.695 3 0.0061839 36869 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 37.177 26.232 58197000 0 0 0 0 3147600 3101600 4593900 5020200 2825300 4947500 6906600 9322500 6065000 3911300 8355100 38691 3040 34512 322662;322663;322664;322665;322666;322667;322668;322669;322670;322671;322672 255561;255562;255563;255564;255565;255566;255567 255563 6 NSAVSCIPTDWVK Unmodified 1475.7079 0.70786408 1106 P20585 MSH3 DNA mismatch repair protein Msh3 yes yes 0 0 0 By MS/MS 2 0 1 1 80.308 75.596 2 6.2718E-06 94070 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.7 110.46 76542000 0 76542000 0 0 0 0 0 0 0 0 0 0 0 0 0 38692 1106 34513 322673 255568 255568 1 NSAVTSSARGLEK Unmodified 1318.6841 0.68409218 5278 Q9Y6D9 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 4 2 2 23.637 19.665 2;3 1.4148E-164 27676 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 261.22 217.58 432240000 376740000 0 55497000 0 0 0 0 0 0 0 0 0 0 0 0 38693 5278 34514 322674;322675;322676;322677 255569;255570;255571;255572 255570 1 NSCNVGGGGGGFK Unmodified 1209.5197 0.51966938 3047 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 18.139 18.252 2 4.6573E-08 18768 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 103.88 93.967 124100000 0 0 0 10351000 9582400 10988000 12066000 9800700 9882700 0 0 23008000 19812000 18604000 0 38694 3047 34515 322678;322679;322680;322681;322682;322683;322684;322685;322686 255573;255574;255575;255576;255577;255578;255579 255579 6 NSCVQQSDNLK Unmodified 1291.5827 0.58266357 3631 Q92576 PHF3 PHD finger protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.9 15.099 2 3.4529E-05 14796 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 117.53 106.37 53042000 0 0 0 0 3332100 2912200 4617000 4038800 4328500 3610400 7141100 6018400 4791000 4917100 7335400 38695 3631 34516 322687;322688;322689;322690;322691;322692;322693;322694;322695;322696;322697;322698 255580;255581;255582;255583;255584;255585;255586;255587;255588;255589;255590 255589 11 NSDADFQNNEK Unmodified 1280.5269 0.52692283 3924 Q96MF7 NSMCE2 E3 SUMO-protein ligase NSE2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.959 13.114 2 2.843E-08 12401 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 155.42 150.11 104450000 0 0 0 7930500 6923400 6513000 9012800 8039300 6629700 9895900 11734000 8376900 12562000 7627100 9206900 38696 3924 34517 322699;322700;322701;322702;322703;322704;322705;322706;322707;322708;322709;322710 255591;255592;255593;255594;255595 255592 3 NSDDTVTWDEYNIQMYDRVIDFDENTALDDAEEESFRK Unmodified 4587.9772 0.97724141 2400 Q14257 RCN2 Reticulocalbin-2 yes yes 0 0 2 By MS/MS 2 0 1 1 97.474 89.343 4 1.9635E-258 115386 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 198.45 197.32 61320000 61320000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38697 2400 34518 322711 255596 255596 1 NSDEADLVPAK Unmodified 1157.5564 0.55643205 2009 P83916 CBX1 Chromobox protein homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 35.845 34.852 2 0.013001 37544 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.167 35.273 118060000 11391000 15721000 0 4682100 3747800 0 0 4813800 0 7904800 13925000 14307000 0 10871000 30700000 38698 2009 34519 322712;322713;322714;322715;322716;322717;322718;322719;322720;322721 255597;255598;255599 255598 3 NSDEINIPR Unmodified 1056.52 0.51998696 4236 Q9BXW9 FANCD2 Fanconi anemia group D2 protein yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 43.587 43.998 2 0.0098739 48248 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.474 48.51 73978000 0 0 0 0 0 12679000 0 0 0 9631300 0 16179000 19662000 0 15826000 38699 4236 34520 322722;322723;322724;322725;322726;322727 255600;255601;255602 255600 3 NSDSLPHR Unmodified 924.44134 0.44134271 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 9.6192 9.8063 2 0.010107 8238 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 137.62 115.38 60037000 0 0 0 0 0 0 4168600 1360700 2587400 4685600 14851000 32384000 0 0 0 38700 4226 34521 322728;322729;322730;322731;322732;322733 255603;255604 255604 1 NSDVLQSPLDSAARDEL Unmodified 1828.8803 0.88028538 3395 Q8NBJ5 COLGALT1 Procollagen galactosyltransferase 1 yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 2 2 1 3 82.505 77.642 2;3 2.1048E-09 98638 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 106.58 91.702 78522000 11060000 67462000 0 0 0 0 0 0 0 0 0 0 0 0 0 38701 3395 34522 322734;322735;322736;322737 255605;255606;255607 255607 3 NSEAQAVIQGALNASETTPK Unmodified 2028.0124 0.012362185 3432 Q8NEY1 NAV1 Neuron navigator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 3 1 1 1 1 1 1 1 1 1 1 1 81.23 80.514 2;3 2.6486E-54 99474 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 155.98 142.26 124210000 0 62907000 1926100 0 3768600 0 3009300 5399900 5012800 9811600 7360000 6191500 2128600 3608400 13089000 38702 3432 34523 322738;322739;322740;322741;322742;322743;322744;322745;322746;322747;322748;322749;322750;322751 255608;255609;255610;255611;255612;255613;255614 255609 6 NSECDPTPSHRGQLNK Unmodified 1838.833 0.83295803 4236 Q9BXW9 FANCD2 Fanconi anemia group D2 protein yes yes 0 0 1 By MS/MS By MS/MS 2 0 4 2 2 14.988 11.779 3;4 1.2095E-10 17137 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.311 84.248 145670000 130810000 0 14857000 0 0 0 0 0 0 0 0 0 0 0 0 38703 4236 34524 322752;322753;322754;322755 255615;255616;255617;255618 255617 4 NSEEEEEEK Unmodified 1121.436 0.43604214 2458 Q14978 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes yes 0 0 0 By MS/MS 1 0 1 1 106.62 111.89 2 0.02514 92653 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 70.747 54.274 15310000 15310000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38704 2458 34525 322756 255619 255619 1 NSEGRQEQLLLSSDSASDR Unmodified 2090.9829 0.98285297 2819 Q5VV41 ARHGEF16 Rho guanine nucleotide exchange factor 16 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 45.858 46.151 3 0.0052894 51822 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 32.156 22.368 36012000 0 0 0 0 0 8447400 0 0 4013900 5933800 0 9079000 8538100 0 0 38705 2819 34526 322757;322758;322759;322760;322761 255620;255621;255622;255623 255622 4 NSEIVVKPNLEYK Unmodified 1531.8246 0.8246084 4332 Q9H0K6 PUS7L Pseudouridylate synthase 7 homolog-like protein yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 62.897 57.551 3 0.013988 74482 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 57.804 44.058 28509000 0 28509000 0 0 0 0 0 0 0 0 0 0 0 0 0 38706 4332 34527 322762;322763 255624;255625 255624 0 NSELLVVSAR Unmodified 1086.6033 0.60332266 1970 P78316 NOP14 Nucleolar protein 14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching 10 0 8 1 1 1 1 1 1 1 1 56.105 56.083 2 0.0037072 64541 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 75.509 52.155 33871000 0 0 0 3908000 4614700 0 6337000 3219000 2777200 5999600 0 0 3449200 3566000 0 38707 1970 34528 322764;322765;322766;322767;322768;322769;322770;322771 255626;255627;255628;255629;255630 255630 3 NSEPAGLETPEAK Unmodified 1341.6412 0.64122431 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 2 1 1 1 1 35.141 35.344 2 1.1876E-12 39102 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 149.23 144.58 588500000 0 0 0 30450000 21801000 58997000 34354000 32146000 20135000 49326000 62242000 71788000 46450000 52611000 108200000 38708 848 34529 322772;322773;322774;322775;322776;322777;322778;322779;322780;322781;322782;322783;322784 255631;255632;255633;255634;255635;255636;255637;255638;255639;255640;255641;255642;255643;255644;255645 255642 15 NSEPEEVIPSR Unmodified 1255.6044 0.60444487 1740 P54577 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 40.073 40.248 2 0.011977 44946 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 48.004 30.978 124710000 0 0 0 6588200 5770100 12258000 8341400 0 0 13627000 16350000 19904000 8146900 0 33723000 38709 1740 34530 322785;322786;322787;322788;322789;322790;322791;322792;322793 255646;255647 255646 2 NSEPEEVIPSRLDIR Unmodified 1752.9006 0.90062689 1740 P54577 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 72.129 70.781 3 9.8274E-06 81126 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 71.344 66.995 315060000 44183000 48629000 49141000 5432000 0 0 9094200 12300000 0 15632000 22919000 26175000 10722000 0 70833000 38710 1740 34531 322794;322795;322796;322797;322798;322799;322800;322801;322802;322803;322804 255648;255649;255650;255651;255652;255653;255654;255655;255656 255655 7 NSEPEEVIPSRLDIRVGK Unmodified 2037.0855 0.085467549 1740 P54577 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed yes yes 0 0 2 By MS/MS By matching 2.6 0.49 2 3 4 1 77.785 72.277 3;4 0.00011176 93253 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.337 61.645 347230000 343820000 3406900 0 0 0 0 0 0 0 0 0 0 0 0 0 38711 1740 34532 322805;322806;322807;322808;322809 255657;255658;255659;255660;255661;255662;255663 255663 5 NSESLHQENKPGSVKPTQTIAVK Unmodified 2491.3031 0.3030649 2477 Q15022 SUZ12 Polycomb protein SUZ12 yes yes 0 0 2 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 33.516 33.785 4 0.0074351 36215 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 25.408 21.337 56577000 0 0 0 0 2915500 4753800 0 5830800 0 8247800 6335800 8478700 6454800 4610200 8949900 38712 2477 34533 322810;322811;322812;322813;322814;322815;322816;322817;322818 255664 255664 1 NSESVDQGAKPESK Unmodified 1474.69 0.68996541 4616 Q9NRY5 FAM114A2 Protein FAM114A2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.4 2.04 1 1 23 2 2 2 2 2 2 1 2 2 2 2 2 2 7.3477 7.195 2;3 2.6046E-18 5041 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 138.45 125.87 473430000 0 54388000 0 18429000 17459000 23827000 30192000 33506000 9824600 47208000 82387000 32413000 48862000 33566000 41363000 38713 4616 34534 322819;322820;322821;322822;322823;322824;322825;322826;322827;322828;322829;322830;322831;322832;322833;322834;322835;322836;322837;322838;322839;322840;322841;322842;322843 255665;255666;255667;255668;255669;255670;255671;255672;255673;255674;255675;255676;255677;255678;255679;255680 255670 14 NSETEIQDSQK Unmodified 1277.5735 0.57353867 2724 Q5FWF5 ESCO1 N-acetyltransferase ESCO1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 13.055 13.222 2 2.5451E-05 12149 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 120.99 88.574 15137000 0 0 0 0 828640 1087700 0 0 0 4291600 4430800 4498400 0 0 0 38714 2724 34535 322844;322845;322846;322847;322848 255681;255682;255683 255683 3 NSETFPTILEEAK Unmodified 1477.73 0.73003931 417 O60610 DIAPH1 Protein diaphanous homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 79.228 78.572 2 4.4734E-14 90829 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 170.89 143.77 1766800000 0 1117100000 15024000 33321000 33482000 51457000 45938000 40029000 36263000 62927000 63395000 70057000 47520000 54066000 96247000 38715 417 34536 322849;322850;322851;322852;322853;322854;322855;322856;322857;322858;322859;322860;322861;322862;322863 255684;255685;255686;255687;255688;255689;255690;255691;255692;255693;255694;255695;255696;255697 255695 14 NSFASALR Unmodified 864.44537 0.44536545 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 40.572 40.698 2 0.0074056 45176 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 89.752 41.637 192050000 0 0 0 11857000 14923000 17937000 19223000 15528000 0 22056000 20920000 23052000 24589000 21966000 0 38716 19 34537 322864;322865;322866;322867;322868;322869;322870;322871;322872;322873 255698;255699;255700;255701 255698 4 NSFDELSK Unmodified 938.43453 0.434526 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 33.793 33.995 2 0.013814 37266 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 71.491 42.131 96192000 0 0 0 0 4733000 10402000 7028900 0 0 12565000 16770000 20630000 10661000 13402000 0 38717 2775 34538 322874;322875;322876;322877;322878;322879;322880;322881 255702;255703;255704;255705 255704 4 NSFGILSSK Unmodified 951.50255 0.50254598 2070 Q02086 SP2 Transcription factor Sp2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 53.762 54.105 2 0.04569 60227 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.149 26.222 41896000 0 0 0 0 0 0 3270500 0 2577600 6670800 5822300 10364000 4898800 0 8292700 38718 2070 34539 322882;322883;322884;322885;322886;322887;322888 255706 255706 1 NSFPFFASSK Unmodified 1130.5397 0.53965977 2966 Q6R327 RICTOR Rapamycin-insensitive companion of mTOR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 78.163 77.543 2 0.014615 99072 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.375 62.155 89926000 14785000 0 0 5127800 3798200 0 5267400 6233400 3904800 8879900 9737200 8835900 4933100 6021900 12402000 38719 2966 34540 322889;322890;322891;322892;322893;322894;322895;322896;322897;322898;322899;322900 255707;255708 255708 2 NSFREQLEEEEEAK Unmodified 1736.7853 0.78532236 1356 P35579 MYH9 Myosin-9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.62 3.02 5 24 2 1 2 2 2 2 2 2 2 2 2 2 2 2 2 47.29 47.019 2;3 1.0189E-09 65100 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.44 110.44 4068100000 370970000 249000 77952000 206440000 140430000 296640000 242070000 237520000 199170000 333210000 401290000 550180000 275600000 327570000 408850000 38720 1356 34541 322901;322902;322903;322904;322905;322906;322907;322908;322909;322910;322911;322912;322913;322914;322915;322916;322917;322918;322919;322920;322921;322922;322923;322924;322925;322926;322927;322928;322929 255709;255710;255711;255712;255713;255714;255715;255716;255717;255718;255719;255720;255721;255722;255723;255724;255725;255726;255727;255728;255729;255730;255731;255732;255733;255734;255735;255736;255737;255738;255739;255740 255723 31 NSFTPLSSSNTIR Unmodified 1422.7103 0.71030693 433 O60825 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 57.771 57.872 2 1.1152E-08 66658 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 121.9 110.87 1138500000 0 0 0 60702000 100010000 128790000 136560000 90020000 98201000 123670000 123590000 150590000 0 0 126320000 38721 433 34542 322930;322931;322932;322933;322934;322935;322936;322937;322938;322939 255741;255742;255743;255744;255745;255746;255747;255748;255749;255750;255751;255752 255752 11 NSGFDVLYHNMK Oxidation (M) 1439.6503 0.65034921 2174 Q0JRZ9 FCHO2 F-BAR domain only protein 2 yes yes 0 1 0 By MS/MS By MS/MS 2 0 3 2 1 60.652 53.873 2;3 0.0048115 73013 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.7 45.986 23060000 17131000 0 5928600 0 0 0 0 0 0 0 0 0 0 0 0 38722 2174 34543 322940;322941;322942 255753;255754 255753 3547 2 NSGFDVLYHNMK Unmodified 1423.6554 0.65543458 2174 Q0JRZ9 FCHO2 F-BAR domain only protein 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 73.16 67.308 3 0.040577 88945 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.257 36.189 13670000 11548000 0 2121900 0 0 0 0 0 0 0 0 0 0 0 0 38723 2174 34543 322943;322944 255755 255755 0 NSGNFQK Unmodified 793.37187 0.37186616 1496 P46063 RECQL ATP-dependent DNA helicase Q1 yes yes 0 0 0 By MS/MS 2 0 1 1 2.3793 -0.86562 2 0.031081 1606 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.706 75.485 85072000 0 85072000 0 0 0 0 0 0 0 0 0 0 0 0 0 38724 1496 34544 322945 255756;255757 255756 2 NSGPALTESLVQTLVK Unmodified 1655.9094 0.90940066 4752 Q9NYV4 CDK12 Cyclin-dependent kinase 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 89.519 89.619 2 0.013008 103178 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 49.333 40.145 39042000 0 0 0 0 2054600 2058700 2226700 0 2338700 6685200 4003400 3407500 2135000 3709200 10423000 38725 4752 34545 322946;322947;322948;322949;322950;322951;322952;322953;322954;322955 255758 255758 1 NSGPLGTEMNTGFSSEVK Oxidation (M) 1869.8415 0.84145703 5066 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.549 56.672 2 2.2716E-38 64148 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 132.86 117.32 128100000 0 0 0 7704500 8297000 7887700 12112000 8170400 8208100 8341100 10019000 17325000 16075000 10547000 13411000 38726 5066 34546 322956;322957;322958;322959;322960;322961;322962;322963;322964;322965;322966;322967 255759;255760;255761;255762;255763;255764;255765;255766;255767;255768;255769;255770;255771;255772 255765 6426 14 NSGPLGTEMNTGFSSEVK Unmodified 1853.8465 0.84654241 5066 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.241 70.316 2 7.9903E-129 79931 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 204.13 183.36 174060000 0 0 0 7485100 9780100 9743400 11018000 11507000 11002000 12885000 19352000 23180000 16375000 16282000 25448000 38727 5066 34546 322968;322969;322970;322971;322972;322973;322974;322975;322976;322977;322978;322979 255773;255774;255775;255776;255777;255778;255779;255780;255781;255782;255783;255784 255780 12 NSGSGTCLTSQDK Unmodified 1353.5831 0.5830575 3410 Q8NCL4 GALNT6 Polypeptide N-acetylgalactosaminyltransferase 6 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 12.711 12.894 2 0.00092118 11194 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.069 63.456 26105000 0 0 0 0 2162600 2586700 2614300 1726800 0 2664900 2608200 3305700 4094500 2329800 2011900 38728 3410 34547 322980;322981;322982;322983;322984;322985;322986;322987;322988;322989 255785;255786;255787;255788;255789;255790;255791 255787 7 NSGTIRVK Unmodified 873.50321 0.50321468 4064 Q99829 CPNE1 Copine-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 10.17 7.0428 2 0.04781 11581 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 146.27 85.478 788570000 709040000 62255000 17275000 0 0 0 0 0 0 0 0 0 0 0 0 38729 4064 34548 322990;322991;322992 255792 255792 0 NSGVPDDIFK Unmodified 1090.5295 0.52948901 2228 Q13045 FLII Protein flightless-1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 62.868 61.868 2 0.0004382 78600 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.53 98.743 160180000 0 102430000 0 0 0 9957000 0 4903800 7684400 6564500 9579400 0 0 5435100 13622000 38730 2228 34549 322993;322994;322995;322996;322997;322998;322999;323000;323001 255793;255794;255795 255795 3 NSHEEMDNFHK Oxidation (M) 1402.5572 0.5571771 3242 Q8IWJ2 GCC2 GRIP and coiled-coil domain-containing protein 2 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 9.3523 6.0437 2 0.033751 8707 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 49.96 47.916 21487000 0 21487000 0 0 0 0 0 0 0 0 0 0 0 0 0 38731 3242 34550 323002;323003 255796 255796 1 NSHLDGSSSSEMK Oxidation (M) 1393.578 0.57797212 2091 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes yes 0 1 0 By MS/MS 2 0 1 1 6.3624 3.1221 2 0.022686 5210 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 54.486 47.818 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38732 2091 34551 323004 255797 255797 1 NSHSSIAEIQK Unmodified 1212.6099 0.6098646 3434 Q8NEZ2 VPS37A Vacuolar protein sorting-associated protein 37A yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.108 19.304 2 0.017825 19540 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 43.77 10.219 30925000 0 0 0 1437200 1822400 2131900 1426900 2355200 1712500 3140100 4069200 2904700 4190700 1861500 3872800 38733 3434 34552 323005;323006;323007;323008;323009;323010;323011;323012;323013;323014;323015;323016 255798 255798 1 NSIALVSTNYPLSK Unmodified 1505.809 0.80895834 3256 Q8IX90 SKA3 Spindle and kinetochore-associated protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 74.752 74.185 2 1.434E-08 85242 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 119.74 98.873 126480000 8318200 0 0 6532100 8157200 5218300 9517200 10196000 7897500 11956000 12383000 15446000 9587500 8601100 12666000 38734 3256 34553 323017;323018;323019;323020;323021;323022;323023;323024;323025;323026;323027;323028;323029 255799;255800;255801;255802;255803;255804;255805;255806;255807;255808;255809;255810;255811 255802 13 NSIAMQEQMLACK Unmodified 1522.6942 0.69420463 1638 P50851 LRBA Lipopolysaccharide-responsive and beige-like anchor protein yes yes 0 0 0 By MS/MS 2 0 1 1 64.999 59.082 2 0.0028672 75710 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.48 87.789 18529000 0 18529000 0 0 0 0 0 0 0 0 0 0 0 0 0 38735 1638 34554 323030 255812 255812 1 NSIEDIHAFAIR Unmodified 1384.7099 0.709913 4616 Q9NRY5 FAM114A2 Protein FAM114A2 yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 15 1 1 1 1 2 1 1 1 2 2 1 1 72.272 72.364 2;3 0.0060124 83248 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 41.48 37.902 159930000 0 0 0 8737500 4745000 13662000 9240700 32530000 6892800 13742000 9537000 15822000 19036000 10353000 15630000 38736 4616 34555 323031;323032;323033;323034;323035;323036;323037;323038;323039;323040;323041;323042;323043;323044;323045 255813;255814;255815;255816;255817 255815 4 NSILAQVLDQSAR Unmodified 1413.7576 0.75759147 207 O14737 PDCD5 Programmed cell death protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 84.301 84.457 2 1.1821E-13 97990 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 142.07 118.34 93802000 0 0 0 0 0 0 4894600 0 3764400 7335500 14935000 15324000 0 11325000 36224000 38737 207 34556 323046;323047;323048;323049;323050;323051;323052;323053 255818;255819;255820;255821;255822;255823;255824;255825 255825 8 NSILASSGFGAPLPSSSQPLTFGSGR Unmodified 2534.2765 0.2765158 3061 Q7LBC6 KDM3B Lysine-specific demethylase 3B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 14 1 1 2 2 2 2 2 1 1 88.687 88.84 2;3 2.7834E-13 103086 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 40.208 32.215 76288000 0 0 0 0 0 4808500 2161700 10543000 5434300 18080000 13019000 11199000 0 1552900 9488900 38738 3061 34557 323054;323055;323056;323057;323058;323059;323060;323061;323062;323063;323064;323065;323066;323067 255826;255827;255828;255829;255830 255826 5 NSILFLNSLDAK Unmodified 1333.7242 0.72416608 3257 Q8IXB1 DNAJC10 DnaJ homolog subfamily C member 10 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 86.007 84.964 2 0.00010927 107727 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.634 59.884 100350000 61832000 0 6667900 0 0 0 2344300 3291500 5372800 6658600 3469700 4827500 0 0 5887800 38739 3257 34558 323068;323069;323070;323071;323072;323073;323074;323075;323076 255831;255832;255833 255832 2 NSINQVVQLR Unmodified 1169.6517 0.65166983 1179 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 57.453 57.584 2 0.0094297 64786 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 69.598 51.779 49953000 0 0 0 6314800 0 0 6183100 0 0 6726500 9140300 0 0 7882100 13706000 38740 1179 34559 323077;323078;323079;323080;323081;323082;323083;323084;323085;323086 255834;255835;255836;255837;255838;255839;255840;255841;255842 255838 9 NSIPEPIDPLFK Unmodified 1368.7289 0.7289171 1601;32 P49792;P0DJD0;P0DJD1;A6NKT7;Q7Z3J3 RANBP2;RGPD1;RGPD2;RGPD3;RGPD4 E3 SUMO-protein ligase RanBP2;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RanBP2-like and GRIP domain-containing protein 3;RanBP2-like and GRIP domain-containing protein 4 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83.871 83.406 2 0.00053296 96096 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.136 69.918 564940000 0 248300000 3787600 8830200 11659000 18557000 12438000 19915000 24079000 39300000 37102000 31102000 31400000 28663000 49815000 38741 1601;32 34560 323087;323088;323089;323090;323091;323092;323093;323094;323095;323096;323097;323098;323099;323100 255843;255844;255845;255846;255847;255848;255849;255850;255851;255852;255853;255854;255855;255856;255857 255848 13 NSIPLQLPVEALQK Unmodified 1548.8875 0.88754301 3336 Q8N531 FBXL6 F-box/LRR-repeat protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 87.354 87.421 2 0.00044189 101360 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 83.081 73.649 84627000 0 0 0 4635100 7806900 7051600 5763000 5671300 6092600 12531000 8601000 9528000 6882900 0 10064000 38742 3336 34561 323101;323102;323103;323104;323105;323106;323107;323108;323109;323110;323111 255858;255859;255860;255861;255862;255863;255864;255865;255866;255867 255867 10 NSIQFTDGYEVK Unmodified 1399.662 0.66195975 1672 P51812 RPS6KA3 Ribosomal protein S6 kinase alpha-3 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 61.003 61.294 2 0.0013227 69163 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 80.979 43.504 82788000 0 0 0 0 0 13481000 5788200 0 0 0 12990000 15015000 0 12160000 23355000 38743 1672 34562 323112;323113;323114;323115;323116;323117 255868;255869;255870 255870 3 NSIVNSQPPEK Unmodified 1211.6146 0.61461563 4923 Q9UIA9 XPO7 Exportin-7 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 25.823 26.009 2 0.00076551 26349 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.665 83.677 71039000 0 0 0 3417400 2429200 10227000 3946700 4087700 3098600 9945400 6389300 8560400 0 4278300 14660000 38744 4923 34563 323118;323119;323120;323121;323122;323123;323124;323125;323126;323127;323128 255871;255872;255873;255874;255875 255873 5 NSIYSGLEAFGDVK Unmodified 1498.7304 0.73037367 2057 Q01581 HMGCS1 Hydroxymethylglutaryl-CoA synthase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 4.83 3.67 3 1 2 1 2 1 1 1 84.602 81.563 2 0.0013274 101849 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.338 61.823 639140000 12647000 603240000 11013000 0 0 0 0 0 944510 0 0 0 0 0 11298000 38745 2057 34564 323129;323130;323131;323132;323133;323134 255876;255877;255878;255879;255880;255881 255876 6 NSKIEISELNR Unmodified 1301.6939 0.69392858 780 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 19 2 2 1 1 2 1 2 1 2 2 1 2 43.136 43.305 2;3 2.5147E-08 47818 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 148.56 57.292 + 1545500000 0 0 0 268040000 42866000 29509000 12597000 149080000 26315000 92134000 21835000 685730000 145890000 13046000 58425000 38746 780 34565 323135;323136;323137;323138;323139;323140;323141;323142;323143;323144;323145;323146;323147;323148;323149;323150;323151;323152;323153 255882;255883;255884;255885;255886;255887;255888;255889;255890;255891;255892;255893;255894 255892 10 NSLCFPEDAEISK Unmodified 1508.6817 0.68170891 455 O75116 ROCK2 Rho-associated protein kinase 2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 72.629 67.593 2 0.0023756 85382 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.09 92.44 182350000 0 182350000 0 0 0 0 0 0 0 0 0 0 0 0 0 38747 455 34566 323154;323155 255895 255895 1 NSLDASRPAGLSPTLTPGER Unmodified 2038.0443 0.044331016 2371 Q14135 VGLL4 Transcription cofactor vestigial-like protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.083 61.184 3 1.6372E-20 69664 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 92.932 78.666 150720000 0 0 0 9163000 6403900 7738500 10302000 15515000 7281800 13750000 14355000 16654000 12493000 11037000 26026000 38748 2371 34567 323156;323157;323158;323159;323160;323161;323162;323163;323164;323165;323166;323167 255896;255897;255898;255899;255900;255901;255902;255903;255904;255905;255906;255907;255908 255906 13 NSLDCEIVSAK Unmodified 1234.5864 0.58635197 2055 Q01518 CAP1 Adenylyl cyclase-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 47.823 46.537 2 1.9446E-05 52742 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 126.71 48.191 4185200000 54977000 3653300000 7048200 28636000 12448000 43861000 26097000 15311000 14442000 41630000 54969000 40949000 30163000 41502000 119810000 38749 2055 34568 323168;323169;323170;323171;323172;323173;323174;323175;323176;323177;323178;323179;323180;323181;323182;323183 255909;255910;255911;255912;255913;255914;255915;255916;255917;255918;255919;255920;255921;255922;255923;255924;255925;255926;255927 255911 19 NSLDDLVGPPSNLEGQSDER Unmodified 2140.9873 0.98726965 5292 Q9Y6Q9 NCOA3 Nuclear receptor coactivator 3 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.908 76.021 2 8.4487E-37 87878 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 106.13 85.667 51531000 0 0 0 0 3444600 4323900 4115000 4605500 2772300 6176000 5025800 5298000 3846900 4649100 7274200 38750 5292 34569 323184;323185;323186;323187;323188;323189;323190;323191;323192;323193;323194;323195 255928;255929;255930;255931;255932;255933;255934 255933 7 NSLDGSQEEK Unmodified 1105.4887 0.48874641 4814 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 7.6022 7.6772 2 0.026226 5833 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 44.349 21.278 5952800 0 0 0 0 702940 1069300 1219700 0 1685400 0 0 0 0 0 1275500 38751 4814 34570 323196;323197;323198;323199;323200 255935;255936;255937 255935 3 NSLDSFGGR Unmodified 951.44101 0.44100836 2721 Q5BKZ1 ZNF326 DBIRD complex subunit ZNF326 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 33.774 34.224 2 0.004955 36471 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.161 67.765 66232000 0 0 0 0 0 0 0 0 5704900 0 13995000 11068000 13680000 9834800 11949000 38752 2721 34571 323201;323202;323203;323204;323205;323206;323207;323208 255938;255939;255940;255941;255942;255943 255939 6 NSLEDLTAEDFR Unmodified 1408.647 0.64703797 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.825 74.888 2 7.2418E-06 86370 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 127.42 116.27 121970000 0 0 0 4879700 5467700 13978000 5513600 7544300 6447500 13242000 9879300 10179000 11243000 10006000 23594000 38753 619 34572 323209;323210;323211;323212;323213;323214;323215;323216;323217;323218;323219;323220 255944;255945;255946;255947;255948;255949;255950;255951 255945 8 NSLEILLGSIGR Unmodified 1270.7245 0.72450043 4842 Q9UBI1 COMMD3 COMM domain-containing protein 3 yes yes 0 0 0 By MS/MS 10 0 1 1 91.977 92.114 2 0.045439 106787 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.589 24.336 765220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 765220 38754 4842 34573 323221 255952 255952 1 NSLESISSIDRELSPEGPGK Unmodified 2114.0491 0.049141622 2381 Q14160 SCRIB Protein scribble homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.005 76.113 3 7.4279E-06 87730 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 62.617 53.798 99140000 0 0 0 0 3550100 6398400 3712600 8636500 5194700 10195000 15650000 13038000 8313000 7620600 16831000 38755 2381 34574 323222;323223;323224;323225;323226;323227;323228;323229;323230;323231;323232 255953;255954;255955;255956;255957;255958;255959;255960;255961 255958 9 NSLESSGVR Unmodified 947.46722 0.46722311 2828 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog yes yes 0 0 0 By MS/MS 10 0 1 1 15.378 15.338 2 0.0082186 15062 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 70.256 45.437 12568000 0 0 0 0 0 12568000 0 0 0 0 0 0 0 0 0 38756 2828 34575 323233 255962 255962 1 NSLESSGVRTTK Unmodified 1277.6575 0.65754307 2828 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 2 3 2 17.613 14.118 2;3 1.2817E-08 20652 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 120.68 100.9 830210000 362590000 219340000 248280000 0 0 0 0 0 0 0 0 0 0 0 0 38757 2828 34576 323234;323235;323236;323237;323238;323239;323240 255963;255964;255965;255966;255967;255968;255969 255966 4 NSLESYAFNMK Oxidation (M) 1318.5864 0.58635197 934 P11142 HSPA8 Heat shock cognate 71 kDa protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.73 3.67 20 5 12 3 15 7 1 1 1 1 1 1 1 1 1 1 1 1 62.343 59.195 2;3 2.3477E-37 65858 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 183 178.98 13154000000 194330000 10506000000 175020000 99736000 104940000 134910000 149390000 97257000 132100000 168200000 286870000 359500000 128760000 211750000 404790000 38758 934 34577 323241;323242;323243;323244;323245;323246;323247;323248;323249;323250;323251;323252;323253;323254;323255;323256;323257;323258;323259;323260;323261;323262;323263;323264;323265;323266;323267;323268;323269;323270;323271;323272;323273;323274;323275;323276;323277 255970;255971;255972;255973;255974;255975;255976;255977;255978;255979;255980;255981;255982;255983;255984;255985;255986;255987;255988;255989;255990;255991;255992;255993;255994;255995;255996;255997;255998;255999;256000;256001;256002;256003;256004;256005;256006;256007;256008;256009;256010;256011;256012;256013;256014;256015;256016;256017;256018;256019;256020;256021 256019 1215 50 NSLESYAFNMK Unmodified 1302.5914 0.59143734 934 P11142 HSPA8 Heat shock cognate 71 kDa protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.05 3.87 1 5 1 12 2 4 1 1 1 1 1 1 1 1 1 1 1 1 1 74.618 73.597 2 4.7475E-08 86345 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 174.02 174.02 14963000000 369020000 11889000000 175200000 83583000 71191000 148470000 63989000 145670000 72564000 176480000 301080000 284540000 118440000 281290000 782330000 38759 934 34577 323278;323279;323280;323281;323282;323283;323284;323285;323286;323287;323288;323289;323290;323291;323292;323293;323294;323295;323296 256022;256023;256024;256025;256026;256027;256028;256029;256030;256031;256032;256033;256034;256035;256036;256037;256038;256039;256040;256041;256042;256043;256044;256045;256046;256047 256034 23 NSLGGDVLFVGK Unmodified 1204.6452 0.64518747 4323 Q9H0D6 XRN2 5'-3' exoribonuclease 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.803 74.867 2 1.0647E-05 85659 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 108.47 70.914 316410000 0 0 0 17469000 15410000 22949000 20273000 22102000 24408000 29685000 33355000 36814000 26553000 26221000 41166000 38760 4323 34578 323297;323298;323299;323300;323301;323302;323303;323304;323305;323306;323307;323308 256048;256049;256050;256051;256052;256053;256054;256055;256056;256057 256051 10 NSLGGFASTQDTTVALK Unmodified 1708.8632 0.86317875 2995 Q6YHK3 CD109 CD109 antigen yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 70.348 70.454 2 1.5946E-13 80998 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 115.8 104.27 68295000 0 0 0 0 5652300 6492400 5975400 6455100 2864400 7217600 9815300 9116400 5781000 8925300 0 38761 2995 34579 323309;323310;323311;323312;323313;323314;323315;323316;323317;323318 256058;256059;256060;256061;256062;256063;256064;256065;256066;256067;256068;256069 256063 12 NSLLAGGDDDTMSVISGISSR Oxidation (M) 2109.9848 0.98482681 3326 Q8N3U4 STAG2 Cohesin subunit SA-2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 78.371 78.475 2 2.422E-09 89816 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 73.156 58.47 47175000 0 0 0 0 2977800 3363400 2404000 2976000 2292500 6086900 4582300 7986600 2370000 3206200 8929300 38762 3326 34580 323319;323320;323321;323322;323323;323324;323325;323326;323327;323328;323329 256070;256071;256072;256073;256074;256075;256076;256077;256078;256079 256076 4921 9 NSLLIAPMPTASTAQILGNNESIEPYTSNIYTR Oxidation (M) 3594.7876 0.78757755 1171 P23921 RRM1 Ribonucleoside-diphosphate reductase large subunit yes yes 0 1 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 91.306 91.287 3 4.9648E-33 105980 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 63.776 61.941 12189000 0 0 0 688440 0 0 0 0 0 6269200 0 0 0 0 5231900 38763 1171 34581 323330;323331;323332 256080;256081 256080 1695 2 NSLLPFANETNSSR Unmodified 1548.7532 0.75323437 700 O95835 LATS1 Serine/threonine-protein kinase LATS1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 74.562 74.341 2 0.0017221 85945 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 66.262 42.031 15009000 0 0 0 4435600 0 0 0 0 0 0 0 0 10574000 0 0 38764 700 34582 323333;323334 256082;256083 256082 2 NSLLREVESAK Unmodified 1244.6725 0.67246486 2239 Q13136 PPFIA1 Liprin-alpha-1 yes yes 0 0 1 By MS/MS 2 0 1 1 63.136 54.868 2 0.048318 73905 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.548 35.133 28218000 28218000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38765 2239 34583 323335 256084 256084 0 NSLLSLSDT Unmodified 948.47639 0.47639081 3046 Q7L2H7 EIF3M Eukaryotic translation initiation factor 3 subunit M yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.18 2.59 2 20 1 1 2 2 2 2 2 2 1 1 1 1 2 2 75.605 75.893 1;2 0.018209 90692 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 77.923 58.219 228120000 72682000 0 0 12409000 12187000 12233000 15035000 16319000 11754000 5682200 6218400 5879900 5818100 18898000 33002000 38766 3046 34584 323336;323337;323338;323339;323340;323341;323342;323343;323344;323345;323346;323347;323348;323349;323350;323351;323352;323353;323354;323355;323356;323357 256085;256086;256087;256088 256087 3 NSLPDTVQIR Unmodified 1141.6091 0.60913632 1785 P56537 EIF6 Eukaryotic translation initiation factor 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 52.863 53.01 2 0.00086291 59299 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 118.5 79.533 955910000 0 0 0 136500000 55549000 51465000 0 0 22624000 90230000 105180000 92234000 103450000 122330000 176350000 38767 1785 34585 323358;323359;323360;323361;323362;323363;323364;323365;323366;323367 256089;256090;256091;256092;256093;256094;256095;256096;256097 256094 7 NSLPELSR Unmodified 914.48214 0.48214489 4896 Q9UHD1 CHORDC1 Cysteine and histidine-rich domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 41.297 41.554 2 0.029356 45350 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 89.698 21.717 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38768 4896 34586 323368;323369;323370;323371;323372 256098;256099;256100;256101;256102 256101 5 NSLPELSRVEANSTLLNVHIVFEGEK Unmodified 2894.5138 0.51378595 4896 Q9UHD1 CHORDC1 Cysteine and histidine-rich domain-containing protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 95.994 87.864 4 0.0029738 113624 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 32.708 24.635 14916000 14916000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38769 4896 34587 323373 256103 256103 1 NSLQEQQEEEEEARK Unmodified 1845.8341 0.83406347 1357 P35580 MYH10 Myosin-10 yes yes 0 0 1 By MS/MS By MS/MS By matching 10 0 3 1 1 1 20.784 20.745 3 0.0017579 21461 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 42.191 30.422 22982000 0 0 0 0 10121000 0 8721400 4140400 0 0 0 0 0 0 0 38770 1357 34588 323374;323375;323376 256104;256105;256106;256107 256106 4 NSLQQPEGIDR Unmodified 1255.6157 0.61567826 1747 P54750 PDE1A Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 32.848 33.197 2 0.001739 35318 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.942 46.019 20422000 0 0 0 0 0 6385100 0 0 0 0 0 0 6239100 0 7797800 38771 1747 34589 323377;323378;323379 256108;256109 256108 2 NSLSEANTK Acetyl (Protein N-term) 1004.4775 0.47745344 1251;1545 P29508;P48594 SERPINB3;SERPINB4 Serpin B3;Serpin B4 no no 1 0 0 By MS/MS 10 0 1 1 21.654 21.493 2 0.011726 22490 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 45.74 25.286 3190100 0 0 0 3190100 0 0 0 0 0 0 0 0 0 0 0 38772 1251;1545 34590 323380 256110 256110 1 NSLSEEIANMK Oxidation (M) 1250.5813 0.58126659 460 O75145 PPFIA3 Liprin-alpha-3 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 46.776 41.566 2 0.023614 54233 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 54.539 30.385 53217000 0 53217000 0 0 0 0 0 0 0 0 0 0 0 0 0 38773 460 34591 323381;323382 256111 256111 1 NSLSLSEIEK Unmodified 1118.5819 0.58191851 1417 P40617 ARL4A ADP-ribosylation factor-like protein 4A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.499 58.614 2 0.0091779 66913 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 58.246 35.465 52976000 0 0 0 2045400 2769600 4380600 4044600 3122700 3663500 4646500 4781300 6853500 6684000 4328500 5655700 38774 1417 34592 323383;323384;323385;323386;323387;323388;323389;323390;323391;323392;323393;323394 256112;256113;256114;256115;256116;256117;256118 256117 6 NSLTFPDDNDISK Unmodified 1464.6733 0.67325272 2296 Q13464 ROCK1 Rho-associated protein kinase 1 yes yes 0 0 0 By MS/MS 2 0 1 1 65.812 59.895 2 0.034679 76593 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.385 57.076 47133000 0 47133000 0 0 0 0 0 0 0 0 0 0 0 0 0 38775 2296 34593 323395 256119 256119 0 NSLTLEAVK Unmodified 973.54441 0.5444108 3844 Q96G03 PGM2 Phosphoglucomutase-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 54.035 48.077 2 0.023433 62512 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.52 76.091 653590000 13963000 625330000 14296000 0 0 0 0 0 0 0 0 0 0 0 0 38776 3844 34594 323396;323397;323398 256120 256120 0 NSLVIDTPR Unmodified 1013.5506 0.55055881 2670 Q3L8U1 CHD9 Chromodomain-helicase-DNA-binding protein 9 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 47.678 47.874 2 0.020199 53739 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 53.327 32.807 23420000 0 0 0 0 1496000 0 2903700 3294900 2299000 0 3557600 5286500 4582200 0 0 38777 2670 34595 323399;323400;323401;323402;323403;323404;323405 256121 256121 1 NSLVSENEMMNEK Unmodified 1523.6596 0.65959326 4937 Q9UJC3 HOOK1 Protein Hook homolog 1 yes yes 0 0 0 By MS/MS 2 0 1 1 54.47 48.664 2 4.7269E-08 62913 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.06 71.544 28485000 0 28485000 0 0 0 0 0 0 0 0 0 0 0 0 0 38778 4937 34596 323406 256122 256122 1 NSLVSPAQEPAPLQTAMEPQTTVVHNATDGIK Oxidation (M) 3359.6667 0.66673414 2315 Q13555 CAMK2G Calcium/calmodulin-dependent protein kinase type II subunit gamma yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.42 1.93 1 11 1 1 1 1 1 1 1 1 1 1 1 1 76.997 76.802 3 1.0838E-135 88390 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 151.37 145.89 140070000 0 17294000 0 1708000 0 10984000 7915400 9718200 10507000 14157000 12594000 15875000 9308000 11366000 18646000 38779 2315 34597 323407;323408;323409;323410;323411;323412;323413;323414;323415;323416;323417;323418 256123;256124;256125;256126;256127;256128;256129;256130;256131;256132;256133 256126 3780 11 NSLVSPAQEPAPLQTAMEPQTTVVHNATDGIK Unmodified 3343.6718 0.67181951 2315 Q13555 CAMK2G Calcium/calmodulin-dependent protein kinase type II subunit gamma yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 84.814 80.802 3 1.0675E-12 100659 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.943 53.887 79711000 0 79711000 0 0 0 0 0 0 0 0 0 0 0 0 0 38780 2315 34597 323419;323420 256134;256135 256134 2 NSLYDMAR Oxidation (M) 984.43348 0.43348014 4209 Q9BWF3;Q9BQ04 RBM4;RBM4B RNA-binding protein 4;RNA-binding protein 4B yes no 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 24.895 25.135 2 0.047613 26796 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 42.075 21.515 103040000 0 0 0 0 5943100 5995200 8128000 7760500 6737700 16579000 8426900 10809000 13722000 8217100 10723000 38781 4209 34598 323421;323422;323423;323424;323425;323426;323427;323428;323429;323430;323431 256136;256137 256137 2 NSMASMSQQLK Oxidation (M) 1239.5588 0.55875701 227 O14920 IKBKB Inhibitor of nuclear factor kappa-B kinase subunit beta yes yes 0 1 0 By MS/MS 2 0 1 1 25.875 21.672 2 0.0083298 28543 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.962 35.888 5208900 0 5208900 0 0 0 0 0 0 0 0 0 0 0 0 0 38782 227 34599 323432 256138 256138 295 1 NSMEGASTSTTENFGHRAK Oxidation (M) 2039.8967 0.8966805 3195 Q86XK2 FBXO11 F-box only protein 11 yes yes 0 1 1 By MS/MS 2 0 1 1 22.774 17.878 3 7.9907E-07 25579 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.468 86.322 10147000 10147000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38783 3195 34600 323433 256139 256139 4817 1 NSMEGASTSTTENFGHRAK Unmodified 2023.9018 0.90176588 3195 Q86XK2 FBXO11 F-box only protein 11 yes yes 0 0 1 By MS/MS 2 0 1 1 33.036 27 3 1.4413E-06 38014 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.468 80.214 13728000 13728000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38784 3195 34600 323434 256140 256140 0 NSMPASSFQQQK Oxidation (M) 1367.614 0.6139637 5141;4557 Q9Y383;Q9NQ29 LUC7L2;LUC7L Putative RNA-binding protein Luc7-like 2;Putative RNA-binding protein Luc7-like 1 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 18.852 19.058 2 0.00021056 19404 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 110.14 98.984 180670000 0 0 0 14425000 12668000 15645000 0 13111000 16705000 25159000 15697000 26900000 23371000 0 16984000 38785 5141;4557 34601 323435;323436;323437;323438;323439;323440;323441;323442;323443;323444 256141;256142;256143;256144;256145;256146;256147 256147 5970;6530 5 NSMPASSFQQQK Unmodified 1351.619 0.61904908 5141;4557 Q9Y383;Q9NQ29 LUC7L2;LUC7L Putative RNA-binding protein Luc7-like 2;Putative RNA-binding protein Luc7-like 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.116 31.305 2 1.8791E-14 33834 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 153.97 143.45 550720000 0 0 0 33792000 35672000 36688000 41220000 35868000 31861000 53745000 50381000 80309000 44431000 42097000 64653000 38786 5141;4557 34601 323445;323446;323447;323448;323449;323450;323451;323452;323453;323454;323455;323456 256148;256149;256150;256151;256152;256153;256154;256155;256156;256157;256158;256159;256160;256161 256153 14 NSMSETVR Oxidation (M) 938.41274 0.4127447 1563 P49257 LMAN1 Protein ERGIC-53 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 5.7122 5.8536 2 0.015237 3489 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 60.59 49.221 17476000 0 0 0 0 2058900 0 3251800 0 1391400 4131500 2381800 0 2117100 2144000 0 38787 1563 34602 323457;323458;323459;323460;323461;323462;323463 256162;256163;256164;256165 256163 2480 4 NSNFLNSHSQLTGQTLVDLEPK Unmodified 2441.2187 0.21866657 2123 Q06190 PPP2R3A Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha yes yes 0 0 0 By MS/MS 2 0 1 1 87.121 78.991 3 3.7877E-20 102955 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.6 88.671 20868000 20868000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38788 2123 34603 323464 256166;256167 256167 2 NSNILEDLETLR Unmodified 1415.7256 0.72562264 1538 P48444 ARCN1 Coatomer subunit delta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 89.558 89.691 2 0.0001023 103842 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 106.62 94.003 28990000 0 0 0 0 0 1824100 0 1958100 0 6494600 3107800 1905300 0 2332200 11368000 38789 1538 34604 323465;323466;323467;323468;323469;323470;323471 256168;256169;256170;256171 256169 4 NSNLVGAAHEELQQSR Unmodified 1751.8551 0.85507368 757 P02545 LMNA Prelamin-A/C;Lamin-A/C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.477 47.641 3 5.3467E-29 53575 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 141.97 137.72 1137600000 0 0 0 70709000 38060000 83028000 49136000 61409000 33544000 93445000 117200000 166150000 62334000 71331000 291260000 38790 757 34605 323472;323473;323474;323475;323476;323477;323478;323479;323480;323481;323482;323483 256172;256173;256174;256175;256176;256177;256178;256179;256180;256181;256182;256183;256184 256172 13 NSNMGFWDDAVK Unmodified 1382.5925 0.59249998 2994 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 72.92 73.119 2 0.0041351 84187 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 70.942 60.988 63455000 0 0 0 0 0 0 3806200 6623600 0 8482400 8594000 7250300 5726300 8475700 14496000 38791 2994 34606 323484;323485;323486;323487;323488;323489;323490;323491 256185;256186;256187;256188;256189;256190;256191;256192 256192 8 NSNMGFWDDAVK Oxidation (M) 1398.5874 0.5874146 2994 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 61.993 62.238 2 0.0052653 71398 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 49.466 44.264 36180000 0 0 0 0 0 2905000 0 0 4266400 4793200 0 6665300 6849400 4066200 6634500 38792 2994 34606 323492;323493;323494;323495;323496;323497;323498 256193 256193 4611 1 NSNPALNDNLEK Unmodified 1327.6368 0.63680763 140 O00299 CLIC1 Chloride intracellular channel protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching 7.5 3.72 1 3 1 11 1 3 1 1 1 1 1 1 1 1 1 1 1 1 39.818 38.792 2 6.8407E-34 37336 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 173.24 161 1626400000 191150000 650010000 4932000 25666000 12202000 0 23502000 24779000 17730000 28044000 134660000 96561000 24326000 81643000 311220000 38793 140 34607 323499;323500;323501;323502;323503;323504;323505;323506;323507;323508;323509;323510;323511;323512;323513;323514 256194;256195;256196;256197;256198;256199;256200;256201;256202;256203;256204;256205;256206 256202 12 NSNQLGGNTESSESSETCSSK Unmodified 2201.8979 0.89786229 4467 Q9H9A5 CNOT10 CCR4-NOT transcription complex subunit 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 17.175 17.356 2;3 3.9461E-37 17093 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 132.05 132.05 94217000 0 0 0 4768200 5219800 7819200 5022200 7541400 5851000 6608700 8359600 13853000 10395000 9030700 9748400 38794 4467 34608 323515;323516;323517;323518;323519;323520;323521;323522;323523;323524;323525;323526;323527;323528;323529;323530;323531;323532;323533;323534;323535;323536;323537;323538 256207;256208;256209;256210;256211;256212;256213;256214;256215;256216;256217 256215 11 NSNSGNSALNNATPNTPR Unmodified 1827.846 0.84596556 4995 Q9ULH7 MKL2 MKL/myocardin-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.039 30.277 2 5.0785E-164 32527 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 215.87 211.7 97284000 0 0 0 0 4675800 6907500 9862300 7758600 4896100 12364000 8031100 9649200 8154200 10236000 14749000 38795 4995 34609 323539;323540;323541;323542;323543;323544;323545;323546;323547;323548;323549;323550 256218;256219;256220;256221;256222;256223;256224;256225;256226;256227;256228;256229 256227 12 NSNTVVFVK Unmodified 1006.5447 0.54474515 592 O94842 TOX4 TOX high mobility group box family member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.67 42.845 2 0.0032698 47098 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 93.162 70.233 414720000 0 0 0 20664000 20109000 26777000 30093000 30893000 26126000 36932000 46104000 47731000 38682000 34180000 56430000 38796 592 34610 323551;323552;323553;323554;323555;323556;323557;323558;323559;323560;323561;323562 256230;256231;256232;256233;256234;256235;256236;256237;256238;256239;256240 256238 7 NSNVDSSYLESLYQSCPR Unmodified 2117.9324 0.9323973 3073 Q7Z2W4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 0 0 0 By matching By matching By MS/MS By matching By matching 10 0 5 1 1 1 1 1 78.339 78.498 2 4.2963E-26 90350 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 106.13 100.95 17448000 0 0 0 0 0 0 1740700 3173700 3245500 4738800 0 4549700 0 0 0 38797 3073 34611 323563;323564;323565;323566;323567 256241 256241 1 NSNYFSMDSMEGK Unmodified 1508.5912 0.59117935 2370 Q14134 TRIM29 Tripartite motif-containing protein 29 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 65.131 63.398 2 0.0033887 72172 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.179 63.238 34759000 0 24806000 0 0 0 0 0 0 0 4330600 0 0 0 0 5622400 38798 2370 34612 323568;323569;323570;323571 256242;256243;256244;256245;256246 256244 5 NSNYFSMDSMEGK 2 Oxidation (M) 1540.581 0.58100859 2370 Q14134 TRIM29 Tripartite motif-containing protein 29 yes yes 0 2 0 By MS/MS 2 0 1 1 35.156 30.4 2 0.029581 39774 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 50.791 48.659 7035800 0 7035800 0 0 0 0 0 0 0 0 0 0 0 0 0 38799 2370 34612 323572 256247 256247 3855;3856 1 NSNYFSMDSMEGK Oxidation (M) 1524.5861 0.58609397 2370 Q14134 TRIM29 Tripartite motif-containing protein 29 yes yes 0 1 0 By MS/MS 2 0 2 2 50.612 44.901 2 0.0010856 60049 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.713 83.101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38800 2370 34612 323573;323574 256248;256249 256249 3855;3856 2 NSPATLFEVPDTW Unmodified 1475.6933 0.69325988 662 O95453 PARN Poly(A)-specific ribonuclease PARN yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 97.617 93.576 2 0.0028399 115402 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.53 76.79 87174000 0 87174000 0 0 0 0 0 0 0 0 0 0 0 0 0 38801 662 34613 323575;323576 256250 256250 1 NSPFQIPPPSPDSK Unmodified 1509.7464 0.74635808 3180 Q86W92 PPFIBP1 Liprin-beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 2 2 1 1 1 3 1 1 1 2 2 68.544 68.607 2 5.9807E-19 77866 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 131.17 123.79 180110000 0 0 0 8433100 13192000 12139000 12852000 11510000 10602000 15875000 20594000 24324000 15395000 11211000 23981000 38802 3180 34614 323577;323578;323579;323580;323581;323582;323583;323584;323585;323586;323587;323588;323589;323590;323591;323592;323593;323594 256251;256252;256253;256254;256255;256256;256257;256258;256259;256260;256261;256262;256263;256264;256265;256266;256267;256268;256269;256270;256271;256272;256273;256274;256275;256276;256277;256278;256279;256280;256281;256282;256283;256284;256285;256286;256287;256288;256289;256290;256291;256292;256293;256294;256295 256263 45 NSPGSQVASNPR Unmodified 1212.5847 0.58471248 4323 Q9H0D6 XRN2 5'-3' exoribonuclease 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.257 13.412 2 2.6436E-06 12807 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 112.75 82.939 411800000 0 0 0 20151000 25933000 31555000 29276000 23841000 22625000 37796000 31328000 39539000 54200000 38893000 56662000 38803 4323 34615 323595;323596;323597;323598;323599;323600;323601;323602;323603;323604;323605;323606 256296;256297;256298;256299;256300;256301;256302;256303;256304;256305;256306;256307;256308 256305 13 NSPLDCGSASPNK Unmodified 1345.5932 0.59322826 472 O75179 ANKRD17 Ankyrin repeat domain-containing protein 17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 23.83 23.943 2 0.00081299 25648 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 69.979 66.84 30710000 0 0 0 2809600 3494300 2079600 2348200 3147900 2726500 3254200 2665700 0 4339500 3844100 0 38804 472 34616 323607;323608;323609;323610;323611;323612;323613;323614;323615;323616;323617 256309;256310;256311;256312;256313;256314;256315;256316;256317;256318;256319;256320 256319 12 NSPLLSVSSQTITK Unmodified 1473.8039 0.80387296 3414 Q8ND24 RNF214 RING finger protein 214 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67.967 67.66 2 9.1832E-06 86318 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 132.69 121.05 221940000 0 60645000 0 9408300 0 13426000 13334000 10772000 9086600 14484000 19623000 19547000 15036000 14323000 22251000 38805 3414 34617 323618;323619;323620;323621;323622;323623;323624;323625;323626;323627;323628;323629;323630;323631 256321;256322;256323;256324;256325;256326;256327;256328;256329;256330;256331;256332;256333;256334;256335 256325 15 NSPMEDLGAK Unmodified 1060.4859 0.48590964 2843 Q66K14 TBC1D9B TBC1 domain family member 9B yes yes 0 0 0 By MS/MS 2 0 1 1 42.382 37.287 2 0.0096087 48647 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.1 59.956 38891000 0 38891000 0 0 0 0 0 0 0 0 0 0 0 0 0 38806 2843 34618 323632 256336 256336 1 NSPNNISGISNPPGTPR Unmodified 1720.8493 0.84926002 4216 Q9BWW4 SSBP3 Single-stranded DNA-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.499 48.66 2 1.6286E-10 54816 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 90.731 80.726 119370000 0 0 0 4243400 2918500 7181500 3872600 4268800 6220900 11403000 14645000 19494000 10688000 9070100 25365000 38807 4216 34619 323633;323634;323635;323636;323637;323638;323639;323640;323641;323642;323643;323644 256337;256338;256339;256340;256341;256342;256343;256344;256345 256338 9 NSPNSGQSSALATLTVEQLSSR Unmodified 2246.1139 0.11386714 3171 Q86VQ1 GLCCI1 Glucocorticoid-induced transcript 1 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 81.208 81.311 3 2.673E-08 93860 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 61.89 54.778 103270000 0 0 0 0 6730400 8236700 8191100 8577700 6280500 13639000 10693000 9761500 7377300 9084500 14696000 38808 3171 34620 323645;323646;323647;323648;323649;323650;323651;323652;323653;323654;323655 256346;256347;256348;256349;256350;256351;256352;256353;256354;256355;256356;256357 256348 12 NSPQCPESMEVRR Unmodified 1588.7086 0.70860914 1638 P50851 LRBA Lipopolysaccharide-responsive and beige-like anchor protein yes yes 0 0 1 By matching By matching By MS/MS 10 0 3 1 1 1 26.985 27.383 3 0.045533 28395 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 19.323 6.9633 11156000 0 0 0 0 0 0 0 2235100 0 0 0 0 2418000 0 6502500 38809 1638 34621 323656;323657;323658 256358 256358 1 NSPQEEVELK Unmodified 1171.5721 0.57208211 4070 Q99933 BAG1 BAG family molecular chaperone regulator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.76 34.942 2 0.0014693 39012 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 90.906 66.876 242330000 0 0 0 12007000 7098100 21858000 14835000 8890600 14079000 20115000 32053000 25386000 19287000 19074000 47642000 38810 4070 34622 323659;323660;323661;323662;323663;323664;323665;323666;323667;323668;323669;323670 256359;256360;256361;256362;256363;256364;256365;256366;256367;256368;256369 256368 10 NSPQEEVELKK Unmodified 1299.667 0.66704513 4070 Q99933 BAG1 BAG family molecular chaperone regulator 1 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 30.101 25.707 3 0.00038325 32164 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 79.82 67.204 107290000 0 107290000 0 0 0 0 0 0 0 0 0 0 0 0 0 38811 4070 34623 323671;323672 256370;256371 256371 1 NSPTPATSTESLSPLHNVALR Unmodified 2191.1233 0.12330962 3110 Q7Z6B7 SRGAP1 SLIT-ROBO Rho GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 72.783 72.825 3 1.0079E-06 84098 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 61.102 56.75 64207000 0 0 0 4017400 6504500 6164400 4884000 0 4856500 6870900 6184800 10220000 4736200 0 9768000 38812 3110 34624 323673;323674;323675;323676;323677;323678;323679;323680;323681;323682 256372;256373;256374;256375;256376;256377;256378;256379;256380 256380 8 NSQDDYDEERK Unmodified 1397.5695 0.56951593 578 O76094 SRP72 Signal recognition particle subunit SRP72 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 2 1 7.0873 7.2093 3 8.4434E-05 5356 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 91.313 74.265 199080000 0 0 0 19564000 14775000 23181000 0 33414000 0 0 33508000 18119000 22323000 1603900 32586000 38813 578 34625 323683;323684;323685;323686;323687;323688;323689;323690;323691;323692;323693;323694 256381;256382;256383;256384;256385;256386;256387;256388;256389;256390;256391 256385 10 NSQEDSEDSEDK Unmodified 1381.5117 0.51172628 4349 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 0 0 0 By MS/MS By MS/MS 1 0 2 1 1 106.31 109.39 2 1.7094E-65 91990 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 219.03 216.97 106860000 50905000 55953000 0 0 0 0 0 0 0 0 0 0 0 0 0 38814 4349 34626 323695;323696 256392;256393;256394 256392 3 NSQFAGGPLGNPNTTAK Unmodified 1672.8169 0.81689726 533 O75694 NUP155 Nuclear pore complex protein Nup155 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.299 48.461 2 2.8507E-28 53525 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 113.35 80.823 173920000 0 0 0 10925000 10847000 17221000 14880000 14645000 7876900 13769000 11228000 19727000 11195000 12608000 29003000 38815 533 34627 323697;323698;323699;323700;323701;323702;323703;323704;323705;323706;323707;323708 256395;256396;256397;256398;256399;256400;256401;256402;256403;256404;256405;256406;256407 256399 13 NSQGEEVAQR Unmodified 1116.516 0.51596421 1111 P20700 LMNB1 Lamin-B1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 1 1 2 1 1 2 2 2 1 1 2 7.2444 7.3935 2 0.0021904 5520 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 85.731 57.522 40179000 0 0 0 2705400 1486000 2850000 3167400 2663100 1716900 3298200 8809900 3572400 2894700 2380400 4634700 38816 1111 34628 323709;323710;323711;323712;323713;323714;323715;323716;323717;323718;323719;323720;323721;323722;323723;323724;323725 256408;256409;256410;256411;256412;256413;256414;256415;256416;256417 256413 10 NSQGEEVAQRSTVFK Unmodified 1678.8275 0.82746195 1111 P20700 LMNB1 Lamin-B1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 1 2 40.641 36.03 2;3 0.00057054 45487 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 62.68 55.622 59374000 14321000 0 45053000 0 0 0 0 0 0 0 0 0 0 0 0 38817 1111 34629 323726;323727;323728 256418;256419;256420 256420 2 NSQGGPAPREPNLPTPMTSK Unmodified 2078.0215 0.021487084 5055 Q9UPQ9 TNRC6B Trinucleotide repeat-containing gene 6B protein yes yes 0 0 1 By MS/MS By MS/MS 6 4 1 1 1 1 59.021 55.207 3 0.00012158 74379 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 44.729 28.044 11760000 7608500 0 0 0 0 0 0 0 0 0 0 0 0 0 4151500 38818 5055 34630 323729;323730 256421;256422;256423;256424 256422 4 NSQGSEMFGDDDK Unmodified 1428.5463 0.54633764 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.685 29.877 2 3.9923E-08 31800 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 105.17 98.042 327660000 0 0 0 79311000 14519000 13502000 18406000 56017000 11573000 16487000 24935000 29845000 31520000 11968000 19579000 38819 1029 34631 323731;323732;323733;323734;323735;323736;323737;323738;323739;323740;323741;323742 256425;256426;256427;256428;256429;256430;256431;256432;256433;256434;256435;256436 256434 12 NSQGSEMFGDDDK Oxidation (M) 1444.5413 0.54125227 1029 P15924 DSP Desmoplakin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 16.018 16.193 2 7.9712E-33 16395 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 166.14 164.2 266920000 0 0 0 54801000 12695000 13019000 15605000 40839000 12119000 17074000 19418000 23993000 29753000 11287000 16313000 38820 1029 34631 323743;323744;323745;323746;323747;323748;323749;323750;323751;323752;323753;323754;323755;323756;323757;323758;323759;323760;323761;323762;323763;323764;323765;323766 256437;256438;256439;256440;256441;256442;256443;256444;256445;256446;256447;256448;256449;256450 256443 1440 14 NSQLEQENNLLK Unmodified 1428.7209 0.72087161 2565 Q15714 TSC22D1 TSC22 domain family protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.08 3.33 2 1 9 1 2 1 1 1 1 1 1 1 1 1 50.645 49.18 2 2.636E-24 63553 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 173.32 136.94 1350800000 24520000 1085600000 0 13590000 0 23241000 21207000 27770000 13705000 25650000 0 0 23420000 32679000 59432000 38821 2565 34632 323767;323768;323769;323770;323771;323772;323773;323774;323775;323776;323777;323778 256451;256452;256453;256454;256455;256456;256457;256458;256459;256460;256461 256454 10 NSQLERENTLLK Unmodified 1443.7682 0.76815616 4027 Q99576 TSC22D3 TSC22 domain family protein 3 yes yes 0 0 1 By matching By MS/MS 2 0 2 1 1 45.38 39.755 3 0.041048 50506 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 52.555 29.834 26445000 8930300 0 17515000 0 0 0 0 0 0 0 0 0 0 0 0 38822 4027 34633 323779;323780 256462 256462 0 NSQLFAASQK Unmodified 1092.5564 0.55637247 5078 Q9Y232 CDYL Chromodomain Y-like protein yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33.102 32.442 2 7.1254E-06 41917 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 142.98 117.41 110470000 4675500 41392000 0 4640900 4477100 5322800 6109100 2834900 3427200 5689900 5347600 11100000 3824300 4505500 7122300 38823 5078 34634 323781;323782;323783;323784;323785;323786;323787;323788;323789;323790;323791;323792;323793;323794 256463;256464;256465;256466;256467;256468;256469;256470;256471;256472 256466 10 NSQLGIFSSSEK Unmodified 1295.6357 0.635745 214 O14777 NDC80 Kinetochore protein NDC80 homolog yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching By matching By matching 10 0 7 1 1 1 1 1 1 1 57.209 57.283 2 0.0048774 65293 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 67.726 61.035 41196000 0 0 0 0 4885200 6128200 6477800 5144300 3258400 6726600 8575100 0 0 0 0 38824 214 34635 323795;323796;323797;323798;323799;323800;323801 256473;256474 256473 2 NSQPPEDHSPISRK Unmodified 1590.775 0.77503245 3045 Q7L273 KCTD9 BTB/POZ domain-containing protein KCTD9 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 19.109 15.504 3 0.00080026 22429 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.044 54.631 23514000 17443000 0 6070300 0 0 0 0 0 0 0 0 0 0 0 0 38825 3045 34636 323802;323803 256475;256476 256475 0 NSQQDLNTPDTRPAGLEEADQPPLPGEQGINLDNSGPK Unmodified 4011.9046 0.90460924 2433 Q14686 NCOA6 Nuclear receptor coactivator 6 yes yes 0 0 1 By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 77.925 78.011 4 0.00042359 90179 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 23.224 20.44 83835000 0 0 0 0 8591600 9032500 4664200 7326200 7842200 11204000 12532000 17447000 5195000 0 0 38826 2433 34637 323804;323805;323806;323807;323808;323809;323810;323811;323812 256477;256478;256479 256477 3 NSQSFFSGLFGGSSK Unmodified 1548.7209 0.72087161 1750 P54920 NAPA Alpha-soluble NSF attachment protein yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 86.93 87.055 2 0.032188 100692 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.88 30.051 10776000 0 0 0 0 0 0 0 0 0 2231400 0 1310500 0 1023800 6210300 38827 1750 34638 323813;323814;323815;323816 256480 256480 0 NSRPEANEALER Unmodified 1384.6695 0.66950474 5270 Q9Y696 CLIC4 Chloride intracellular channel protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19.426 18.765 3 0.0062132 24908 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 47.606 35.186 129720000 8647600 10551000 24455000 4413300 0 3034600 3838900 4416100 3424300 5455000 8661200 11682000 3577300 5752900 31806000 38828 5270 34639 323817;323818;323819;323820;323821;323822;323823;323824;323825;323826;323827;323828;323829;323830 256481;256482;256483;256484;256485;256486;256487;256488;256489;256490;256491 256484 8 NSRPEANEALERGLLK Unmodified 1795.9541 0.95405945 5270 Q9Y696 CLIC4 Chloride intracellular channel protein 4 yes yes 0 0 2 By MS/MS By MS/MS 2 0 3 2 1 60.137 52.695 3;4 0.00014338 71181 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.197 57.679 370290000 358750000 11540000 0 0 0 0 0 0 0 0 0 0 0 0 0 38829 5270 34640 323831;323832;323833 256492;256493;256494 256494 3 NSSALHSLLK Unmodified 1068.5928 0.59275797 2863 Q69YN4 KIAA1429 Protein virilizer homolog yes yes 0 0 0 By MS/MS 2 0 1 1 54.486 46.378 2 0.015038 63443 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.893 35.096 19093000 19093000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38830 2863 34641 323834 256495 256495 1 NSSAQAFLGPENPEEPYLDGINYNCVAPGK Unmodified 3250.4877 0.48770714 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 7 3.69 1 1 3 2 1 1 1 87.616 86.089 3 5.4265E-45 105895 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.536 96.904 54727000 0 35026000 0 0 0 0 0 0 0 8255900 4775500 0 0 0 6669100 38831 2431 34642 323835;323836;323837;323838;323839 256496;256497;256498;256499 256497 4 NSSAVEQDHAK Unmodified 1184.5422 0.54217896 4733 Q9NXV6 CDKN2AIP CDKN2A-interacting protein yes yes 0 0 0 By MS/MS 2.67 0.471 1 2 3 5.68 2.359 2;3 2.7786E-09 3759 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 142 112.83 450760000 0 450760000 0 0 0 0 0 0 0 0 0 0 0 0 0 38832 4733 34643 323840;323841;323842 256500;256501;256502 256501 2 NSSCGGGISSSSSSR Unmodified 1428.5899 0.58993379 4222 Q9BXB4 OSBPL11 Oxysterol-binding protein-related protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.5159 7.6437 2 3.599E-07 5160 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 106.01 101.85 32808000 0 0 0 1378100 1352800 1875600 1684700 2692600 2051300 2096000 6129900 3527600 3029400 3018700 3971400 38833 4222 34644 323843;323844;323845;323846;323847;323848;323849;323850;323851;323852;323853;323854 256503;256504;256505;256506;256507;256508;256509;256510;256511;256512;256513 256506 11 NSSCGGGISSSSSSRGGSAK Unmodified 1828.797 0.79696646 4222 Q9BXB4 OSBPL11 Oxysterol-binding protein-related protein 11 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 7.5004 4.6341 3 3.4285E-18 7899 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 105.79 96.963 57787000 53986000 0 3800800 0 0 0 0 0 0 0 0 0 0 0 0 38834 4222 34645 323855;323856 256514;256515 256514 2 NSSDQEGNNISSSSGHR Unmodified 1774.7466 0.74664545 3241 Q8IWI9 MGA MAX gene-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.39 7.5179 3 0.00088945 6138 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 44.005 39.614 32603000 0 0 0 1870700 2305100 2288500 2058800 1797700 1844700 2505400 5668200 3202200 2689900 3316000 3055700 38835 3241 34646 323857;323858;323859;323860;323861;323862;323863;323864;323865;323866;323867;323868 256516;256517;256518;256519;256520;256521 256520 6 NSSEASSGDFLDLK Unmodified 1468.6682 0.66816734 4956 Q9UK76 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 66.793 67.1 2 0.00031172 76913 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 78.692 64.002 13113000 0 0 0 0 0 0 0 0 0 0 3719500 4981900 0 4411200 0 38836 4956 34647 323869;323870;323871 256522;256523;256524 256522 3 NSSEQELR Unmodified 961.44649 0.44648767 5139 Q9Y371 SH3GLB1 Endophilin-B1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 8.0438 8.1539 2 0.0093228 6175 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 83.265 50.424 77484000 0 0 0 4523700 6162500 9791000 9230200 11871000 5844400 4978800 0 9249800 8624600 2547900 4660400 38837 5139 34648 323872;323873;323874;323875;323876;323877;323878;323879;323880;323881;323882 256525;256526;256527;256528;256529;256530;256531;256532;256533 256526 7 NSSEREGHSINTR Unmodified 1485.692 0.6920311 4047 Q99700 ATXN2 Ataxin-2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 5.9978 6.1152 3 3.1676E-05 3286 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.412 69.459 80449000 0 0 0 5152400 3193500 3949300 6793600 3621900 4955100 8065100 8989600 12357000 6058100 6365300 10948000 38838 4047 34649 323883;323884;323885;323886;323887;323888;323889;323890;323891;323892;323893;323894 256534;256535;256536;256537;256538;256539;256540;256541;256542;256543;256544;256545;256546;256547;256548 256537 14 NSSHEEAITALR Unmodified 1326.6528 0.65279205 3466 Q8NI35 INADL InaD-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 33.37 33.44 3 0.011107 37184 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 34.685 24.075 21513000 0 0 0 0 3406200 0 0 3341900 2709000 5210100 0 0 6845600 0 0 38839 3466 34650 323895;323896;323897;323898;323899 256549;256550;256551 256551 3 NSSITHGAGGTK Unmodified 1128.5523 0.55234972 1985 P78524 ST5 Suppression of tumorigenicity 5 protein yes yes 0 0 0 By MS/MS 2 0 1 1 6.9797 3.5475 2 1.4178E-06 6650 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 113.38 82.692 11257000 11257000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38840 1985 34651 323900 256552;256553 256553 2 NSSLLSFDNEDENE Unmodified 1611.6536 0.65363949 3740 Q96AT1 KIAA1143 Uncharacterized protein KIAA1143 yes yes 0 0 0 By MS/MS 1 0 1 1 103.85 109.11 2 0.0049456 89301 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 61.593 59.999 6821000 6821000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38841 3740 34652 323901 256554 256554 1 NSSNFIER Unmodified 965.45666 0.45665842 4862 Q9UBW7 ZMYM2 Zinc finger MYM-type protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 26.611 26.746 2 0.021787 28933 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 61.691 21.588 22879000 0 0 0 0 0 5201300 3368800 4825800 3693500 0 0 0 5789500 0 0 38842 4862 34653 323902;323903;323904;323905;323906 256555;256556;256557 256555 3 NSSNKPAVTTK Unmodified 1145.6041 0.60405094 2458 Q14978 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes yes 0 0 1 By MS/MS By MS/MS 2.2 0.4 4 1 2 3 6.8797 3.5379 2;3 8.7366E-16 5577 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 203.52 155.56 671410000 506510000 164900000 0 0 0 0 0 0 0 0 0 0 0 0 0 38843 2458 34654 323907;323908;323909;323910;323911 256558;256559;256560 256558 3 NSSNTSVGSPSNTIGR Unmodified 1576.7441 0.74412625 3094 Q7Z460 CLASP1 CLIP-associating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.851 28.049 2 0.0011962 29146 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.001 34.256 193880000 0 0 0 12184000 14746000 17330000 12812000 14423000 13961000 18449000 19390000 21005000 16639000 13745000 19196000 38844 3094 34655 323912;323913;323914;323915;323916;323917;323918;323919;323920;323921;323922;323923 256561;256562;256563;256564 256563 3 NSSNTSVGSPSNTIGRTPSR Unmodified 2017.9777 0.97770801 3094 Q7Z460 CLASP1 CLIP-associating protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 29.786 30.12 3 4.5015E-05 32728 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 51.819 46.24 13511000 0 0 0 0 0 0 3407400 0 2248800 0 4226500 0 0 0 3627800 38845 3094 34656 323924;323925;323926;323927 256565;256566 256565 2 NSSPAPPQPAPGK Unmodified 1246.6306 0.63060004 4752 Q9NYV4 CDK12 Cyclin-dependent kinase 12 yes yes 0 0 0 By MS/MS 10 0 1 1 22.093 22.44 2 0.0014319 23441 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 63.32 53.524 28533000 0 0 0 0 0 0 0 0 0 0 0 0 28533000 0 0 38846 4752 34657 323928 256567 256567 1 NSSPINCSR Unmodified 1033.4611 0.46109187 2567 Q15723 ELF2 ETS-related transcription factor Elf-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.239 13.394 2 0.046892 12814 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 42.864 22.309 51968000 0 0 0 2128300 3806100 3373700 3821800 3823300 3224700 4368500 4638800 6561700 6086800 5134500 4999600 38847 2567 34658 323929;323930;323931;323932;323933;323934;323935;323936;323937;323938;323939;323940 256568 256568 1 NSSPINCSRAEK Unmodified 1361.6358 0.63576177 2567 Q15723 ELF2 ETS-related transcription factor Elf-2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 15.282 12.073 3 0.014373 17547 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.261 39.632 30487000 23893000 0 6594100 0 0 0 0 0 0 0 0 0 0 0 0 38848 2567 34659 323941;323942 256569 256569 0 NSSQDDLFPTSDTPR Unmodified 1678.7435 0.74345755 4425 Q9H6T3 RPAP3 RNA polymerase II-associated protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.089 58.204 2 2.7998E-23 66090 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 148.96 142.52 137710000 0 0 0 5254600 5280300 11544000 8878900 6044600 8723200 11157000 14312000 18375000 13315000 9603600 25219000 38849 4425 34660 323943;323944;323945;323946;323947;323948;323949;323950;323951;323952;323953;323954 256570;256571;256572;256573;256574;256575;256576;256577;256578;256579;256580;256581 256575 12 NSSQDDLFPTSDTPRAK Unmodified 1877.8755 0.87553435 4425 Q9H6T3 RPAP3 RNA polymerase II-associated protein 3 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 54.07 49.198 3 0.00025843 63911 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.658 71.878 120100000 0 111790000 8308600 0 0 0 0 0 0 0 0 0 0 0 0 38850 4425 34661 323955;323956;323957 256582;256583 256582 2 NSSQFFQSYVER Unmodified 1490.679 0.6790068 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.264 69.341 2 0.00083166 78728 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 90.913 81.955 191860000 0 0 0 5276900 9467500 15069000 10455000 12740000 12431000 15281000 21078000 32344000 15727000 16742000 25251000 38851 2361 34662 323958;323959;323960;323961;323962;323963;323964;323965;323966;323967;323968;323969 256584;256585;256586;256587;256588;256589;256590;256591;256592;256593 256589 7 NSSQSGGKPGSSPITK Unmodified 1530.7638 0.76379906 2558 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 10.606 10.723 3 0.00020579 8343 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 60.209 55.295 74459000 0 0 0 6600500 4595700 4561900 7667500 5570600 3669000 7847200 0 10791000 6730100 6006400 10419000 38852 2558 34663 323970;323971;323972;323973;323974;323975;323976;323977;323978;323979;323980 256594;256595;256596;256597;256598;256599;256600;256601;256602 256599 9 NSSSDLLLDFPNSK Unmodified 1535.7468 0.74675201 2820 Q5VVJ2 MYSM1 Histone H2A deubiquitinase MYSM1 yes yes 0 0 0 By MS/MS 2 0 1 1 84.621 79.877 2 0.032734 99266 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 44.299 33.47 26872000 0 26872000 0 0 0 0 0 0 0 0 0 0 0 0 0 38853 2820 34664 323981 256603 256603 1 NSSSEQLFSSAR Unmodified 1311.6055 0.6055075 3858 Q96GN5 CDCA7L Cell division cycle-associated 7-like protein yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 41.2 41.557 2 0.044601 46475 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 33.87 16.006 16512000 0 0 0 0 0 0 1681900 0 0 2933100 3146700 4922800 3827100 0 0 38854 3858 34665 323982;323983;323984;323985;323986 256604 256604 1 NSSSPVAATPASVNTTPDKPK Unmodified 2068.0437 0.043662314 2409 Q14469 HES1 Transcription factor HES-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 39.739 39.009 3 0.0043844 49450 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 36.805 27.147 57305000 0 10200000 0 7647700 7525100 4808300 7672800 8489400 0 0 0 10962000 0 0 0 38855 2409 34666 323987;323988;323989;323990;323991;323992;323993 256605;256606 256605 2 NSSSSGTSLLTPK Unmodified 1277.6463 0.64630969 4733 Q9NXV6 CDKN2AIP CDKN2A-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38.95 38.052 2 3.8321E-08 42270 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 105.46 95.174 445310000 12620000 138700000 2256700 18550000 15367000 24959000 19439000 23175000 14481000 25310000 32073000 33789000 33071000 24141000 27373000 38856 4733 34667 323994;323995;323996;323997;323998;323999;324000;324001;324002;324003;324004;324005;324006;324007;324008 256607;256608;256609;256610;256611;256612;256613;256614;256615;256616;256617;256618;256619;256620;256621 256616 15 NSSTGDGAPSSACTSDSK Unmodified 1727.6904 0.6904357 2736 Q5JSZ5 PRRC2B Protein PRRC2B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 9.425 9.5608 2 0.0029625 7351 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.875 51.875 20033000 0 0 0 1720900 0 1778200 1751800 2086900 1590400 0 0 4073700 2180200 1641300 3209200 38857 2736 34668 324009;324010;324011;324012;324013;324014;324015;324016;324017 256622 256622 1 NSSTIIQNPVETPK Unmodified 1526.794 0.79403655 1397 P38432 COIL Coilin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 54.77 54.802 2 0.00055488 62190 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 84.479 71.523 76775000 0 0 0 7468300 6484600 11996000 7303300 5364500 10178000 11660000 0 0 0 6397500 9923100 38858 1397 34669 324018;324019;324020;324021;324022;324023;324024;324025;324026;324027 256623;256624;256625;256626;256627;256628;256629;256630;256631 256623 9 NSSTIIQNPVETPKK Unmodified 1654.889 0.88899957 1397 P38432 COIL Coilin yes yes 0 0 1 By MS/MS 10 0 1 1 44.147 44.207 3 0.0092504 49620 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 23.531 6.7871 10152000 0 0 0 0 0 0 10152000 0 0 0 0 0 0 0 0 38859 1397 34670 324028 256632 256632 1 NSSTYWEGK Unmodified 1070.4669 0.46688876 1209 P26639 TARS Threonine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 28.645 27.968 2 0.00768 35001 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.442 92.679 1671300000 0 1440000000 8095300 0 4716700 5567500 5524400 5277600 3886600 5909400 43739000 36109000 5270800 20493000 86733000 38860 1209 34671 324029;324030;324031;324032;324033;324034;324035;324036;324037;324038;324039;324040;324041;324042 256633;256634;256635;256636;256637;256638;256639;256640 256633 8 NSSVLEQSFLR Unmodified 1278.6568 0.65681479 2282 Q13415 ORC1 Origin recognition complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 72.369 72.504 2 0.0026969 83427 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 77.379 68.516 58089000 0 0 0 0 7223900 0 5812100 5175200 5566400 0 0 13068000 6468400 5455100 9319100 38861 2282 34672 324043;324044;324045;324046;324047;324048;324049;324050;324051;324052 256641;256642;256643;256644;256645;256646;256647;256648;256649;256650 256645 10 NSSVNEGSTYHK Unmodified 1321.5899 0.58985744 232 O14974 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 7.6384 7.1081 3 0.030327 5746 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 33.192 23.759 159310000 0 123460000 0 4027700 6573200 5755800 0 7356800 0 0 0 0 12139000 0 0 38862 232 34673 324053;324054;324055;324056;324057;324058 256651;256652 256652 2 NSSVPLAEHLQIK Unmodified 1434.7831 0.78307794 4264 Q9BZF9 UACA Uveal autoantigen with coiled-coil domains and ankyrin repeats yes yes 0 0 0 By MS/MS 2 0 1 1 73.346 65.149 3 0.0047367 86179 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.524 44.991 54313000 54313000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38863 4264 34674 324059 256653 256653 1 NSSYFVEWIPNNVK Unmodified 1695.8257 0.82567103 1963;842;4160;2350;4182;2306 P07437;P68371;Q13509;Q13885;Q9BVA1;Q9BUF5 TUBB;TUBB4B;TUBB3;TUBB2A;TUBB2B;TUBB6 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-3 chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-6 chain no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.85 3.52 8 1 24 3 3 3 2 2 2 2 2 2 2 2 2 2 2 2 86.855 86.021 2;3 5.4515E-88 107258 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 255.3 241.64 9497900000 2262100000 1296500000 117060000 94004000 152700000 388250000 169740000 487170000 332760000 749760000 573150000 563840000 251320000 460000000 1599600000 38864 842;1963;2306;2350;4182;4160 34675 324060;324061;324062;324063;324064;324065;324066;324067;324068;324069;324070;324071;324072;324073;324074;324075;324076;324077;324078;324079;324080;324081;324082;324083;324084;324085;324086;324087;324088;324089;324090;324091;324092 256654;256655;256656;256657;256658;256659;256660;256661;256662;256663;256664;256665;256666;256667;256668;256669;256670;256671;256672;256673;256674;256675;256676;256677;256678;256679;256680;256681 256658 25 NSSYVHGGLDSNGK Unmodified 1433.6535 0.65352033 2263 Q13283 G3BP1 Ras GTPase-activating protein-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 20.082 20.283 2;3 9.7742E-12 20697 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 101.39 94.998 572690000 0 0 0 30996000 28387000 75216000 31145000 29729000 45703000 78234000 66493000 52976000 43794000 32573000 57445000 38865 2263 34676 324093;324094;324095;324096;324097;324098;324099;324100;324101;324102;324103;324104;324105;324106;324107;324108;324109;324110;324111;324112;324113;324114;324115;324116 256682;256683;256684;256685;256686;256687;256688;256689;256690;256691;256692;256693;256694;256695;256696;256697;256698;256699 256684 16 NSSYVHGGLDSNGKPADAVYGQK Unmodified 2363.1142 0.1142015 2263 Q13283 G3BP1 Ras GTPase-activating protein-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.66 2.95 4 1 24 2 1 2 2 2 2 2 2 2 2 2 2 2 2 2 42.652 41.828 3;4 1.6414E-66 46279 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 119.41 116.36 907590000 69667000 3555700 132520000 48027000 43123000 29768000 69363000 95447000 30225000 60720000 81991000 74710000 61171000 45110000 62197000 38866 2263 34677 324117;324118;324119;324120;324121;324122;324123;324124;324125;324126;324127;324128;324129;324130;324131;324132;324133;324134;324135;324136;324137;324138;324139;324140;324141;324142;324143;324144;324145 256700;256701;256702;256703;256704;256705;256706;256707;256708;256709;256710;256711;256712;256713;256714;256715;256716;256717;256718;256719;256720;256721;256722;256723;256724;256725 256701 22 NSSYVHGGVDASGKPQEAVYGQNDIHHK Unmodified 2993.4016 0.40160974 5028 Q9UN86 G3BP2 Ras GTPase-activating protein-binding protein 2 yes yes 0 0 1 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 2 2 1 1 2 36.884 37.406 4;5 3.4763E-14 40784 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 54.167 51.18 93149000 0 0 0 0 0 0 0 0 0 5506900 10181000 27565000 9344500 6507900 34045000 38867 5028 34678 324146;324147;324148;324149;324150;324151;324152;324153;324154 256726;256727 256727 2 NSTDLDSAPEDPTSPK Unmodified 1672.7428 0.74278885 3968 Q96RK0 CIC Protein capicua homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.362 36.543 2 0.00036303 40092 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 84.365 73.44 41287000 0 0 0 3056500 3714500 2392600 3915600 3312200 2765800 2257100 2794600 5972300 3995200 3228700 3882200 38868 3968 34679 324155;324156;324157;324158;324159;324160;324161;324162;324163;324164;324165;324166 256728;256729;256730;256731;256732;256733;256734;256735;256736;256737;256738 256736 9 NSTELAPPLPVRR Unmodified 1448.81 0.80996139 4433 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 58.863 58.97 3 0.00080427 67086 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 46.481 41.165 83770000 0 0 0 4713600 5200900 7747400 7737600 0 5591300 8506700 7791800 9127900 5459000 8713000 13181000 38869 4433 34680 324167;324168;324169;324170;324171;324172;324173;324174;324175;324176;324177 256739;256740;256741;256742;256743;256744;256745;256746 256742 8 NSTFAEEFAHSIR Unmodified 1507.7056 0.7055559 2652 Q2M389 KIAA1033 WASH complex subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 71.381 71.509 3 0.032999 82255 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 22.349 17.195 44805000 0 0 0 0 1484300 6163100 2739600 0 2435300 5336400 2953100 4245700 3478100 5141300 10828000 38870 2652 34681 324178;324179;324180;324181;324182;324183;324184;324185;324186;324187 256747 256747 1 NSTFSEIFK Unmodified 1071.5237 0.52367535 1249 P29401 TKT Transketolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.36 3.98 5 6 1 2 2 1 1 1 1 1 1 74.191 72.204 1;2 4.2E-05 93132 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 155.42 107.57 6790100000 20234000 5440400000 706970000 0 0 1362800 0 0 0 0 94937000 97679000 6533400 82286000 339650000 38871 1249 34682 324188;324189;324190;324191;324192;324193;324194;324195;324196;324197;324198 256748;256749;256750;256751;256752;256753;256754;256755 256752 7 NSTFSEIFKK Unmodified 1199.6186 0.61863837 1249 P29401 TKT Transketolase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6 4 5 5 3 1 1 1 1 1 1 1 62.123 59.698 2;3 0.004559 83109 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.662 62.329 2670300000 1688800000 423550000 20303000 0 0 0 0 0 0 0 78222000 98247000 11610000 75991000 273630000 38872 1249 34683 324199;324200;324201;324202;324203;324204;324205;324206;324207;324208 256756;256757;256758;256759;256760;256761;256762;256763;256764 256759 9 NSTFTEHLYR Unmodified 1266.5993 0.59929991 4143 Q9BTE3 MCMBP Mini-chromosome maintenance complex-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 41.388 41.722 3 0.029775 46675 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 31.843 22.41 42842000 0 0 0 0 0 3959700 2162800 3960200 0 5290200 6295600 4700500 1373900 5631700 9467400 38873 4143 34684 324209;324210;324211;324212;324213;324214;324215;324216;324217 256765;256766 256766 2 NSTGSQDGPVSNPSSSNSSQDSLHK Unmodified 2516.1011 0.10113021 2239 Q13136 PPFIA1 Liprin-alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 25.024 25.227 3 5.0641E-62 25605 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 112.88 109.95 141710000 0 0 0 8943500 8513000 16808000 9479900 9317900 7162700 12407000 9207800 13020000 14046000 10801000 22002000 38874 2239 34685 324218;324219;324220;324221;324222;324223;324224;324225;324226;324227;324228;324229 256767;256768;256769;256770;256771;256772;256773;256774;256775;256776;256777;256778;256779;256780 256771 14 NSTGVEIK Unmodified 846.4447 0.44469675 4981 Q9UKZ1 CNOT11 CCR4-NOT transcription complex subunit 11 yes yes 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 17.466 17.646 2 0.017183 17861 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 66.073 15.946 63954000 0 0 0 0 5032400 5038800 6547900 5524000 4471100 5841200 6662400 8174200 9612400 7049300 0 38875 4981 34686 324230;324231;324232;324233;324234;324235;324236;324237;324238;324239 256781;256782 256782 2 NSTHSSTAADLLQAK Unmodified 1542.7638 0.76379906 4077 Q99996 AKAP9 A-kinase anchor protein 9 yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 39.353 39.871 3 0.012519 43140 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 19.27 5.8665 15553000 0 0 0 0 0 0 2552900 0 0 0 0 6320200 0 0 6680300 38876 4077 34687 324240;324241;324242 256783 256783 1 NSTNLIQTPQIR Unmodified 1383.747 0.74702678 2649 Q2KHR3 QSER1 Glutamine and serine-rich protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.782 61.881 2 0.00091386 70710 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 89.171 74.505 69685000 0 0 0 4510000 4698700 5512800 4877400 4461000 4478100 5929200 7038900 8395400 6163600 4748400 8871500 38877 2649 34688 324243;324244;324245;324246;324247;324248;324249;324250;324251;324252;324253;324254 256784;256785;256786;256787;256788 256785 4 NSTPSEPGSGR Unmodified 1087.4894 0.48941511 1674 P51858 HDGF Hepatoma-derived growth factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 8.108 8.2388 2 1.3337E-07 6734 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 147.75 132.6 418270000 0 0 0 15535000 7886500 6633400 7839500 12510000 9401900 12926000 121470000 57035000 14722000 35646000 116670000 38878 1674 34689 324255;324256;324257;324258;324259;324260;324261;324262;324263;324264;324265;324266 256789;256790;256791;256792;256793;256794;256795;256796;256797;256798;256799 256797 9 NSTPSEPGSGRGPPQEEEEEEDEEEEATK Unmodified 3172.3076 0.30761333 1674 P51858 HDGF Hepatoma-derived growth factor yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.11 3.8 6 1 12 3 3 1 1 1 1 1 1 1 1 1 1 1 1 1 37.789 35.98 3;4 7.3228E-91 46629 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.44 136.44 1421600000 204940000 736790000 19034000 15574000 14957000 20606000 9974700 23493000 14715000 32352000 82527000 63588000 32798000 40355000 109920000 38879 1674 34690 324267;324268;324269;324270;324271;324272;324273;324274;324275;324276;324277;324278;324279;324280;324281;324282;324283;324284;324285 256800;256801;256802;256803;256804;256805;256806;256807;256808;256809;256810;256811;256812;256813;256814;256815 256804 16 NSTSRNPSGINDDYGQLK Unmodified 1964.9188 0.91879615 448 O60934 NBN Nibrin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.471 39.651 3 1.444E-05 43092 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.555 60.088 85567000 0 0 0 6410300 6667100 5586700 6915100 6271100 6049200 6942900 8192200 9438300 4477700 7470800 11146000 38880 448 34691 324286;324287;324288;324289;324290;324291;324292;324293;324294;324295;324296;324297 256816;256817;256818;256819 256816 4 NSTTDQVYQAIAAK Unmodified 1508.7471 0.74708636 3916 Q96L92 SNX27 Sorting nexin-27 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 62.898 62.464 2 3.2534E-18 77797 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.51 112.56 288980000 0 248040000 0 0 0 4499900 2731700 0 0 5393600 5242200 4558200 3828400 3771400 10912000 38881 3916 34692 324298;324299;324300;324301;324302;324303;324304;324305;324306 256820;256821;256822;256823;256824;256825;256826;256827 256822 8 NSTTIMSR Unmodified 908.43857 0.43856552 3077 Q7Z309 FAM122B Protein FAM122B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 17.612 17.8 2 0.0095736 16330 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 82.452 59.523 165180000 0 0 0 10226000 9309700 10225000 10674000 9163900 7715600 13620000 18840000 26540000 12618000 14722000 21528000 38882 3077 34693 324307;324308;324309;324310;324311;324312;324313;324314;324315;324316;324317;324318 256828;256829;256830 256829 3 NSTVTLVPEQIGK Unmodified 1384.7562 0.75619449 531 O75674 TOM1L1 TOM1-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 66.75 66.083 2 0.0060971 83681 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.056 37.284 230900000 0 137140000 0 4308800 3427000 8078000 7680700 6706300 4886700 7226000 10953000 10966000 6567800 7161500 15795000 38883 531 34694 324319;324320;324321;324322;324323;324324;324325;324326;324327;324328;324329;324330;324331;324332 256831;256832;256833;256834;256835 256833 5 NSTWSGESK Unmodified 994.43559 0.43558863 1085 P19338 NCL Nucleolin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 11.204 10.741 2 0.0030697 12412 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 135.79 135.79 347060000 11903000 291240000 0 3065300 2364700 2755000 5940800 3560900 3163800 2874300 0 6393100 4258400 3069500 6470800 38884 1085 34695 324333;324334;324335;324336;324337;324338;324339;324340;324341;324342;324343;324344;324345 256836;256837;256838;256839;256840;256841;256842 256836 6 NSVEEWTTEDWTEDLSETK Unmodified 2297.9812 0.98118122 2779 Q5T6F2 UBAP2 Ubiquitin-associated protein 2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 87.334 83.302 2 2.6501E-64 103500 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 176.23 159.57 17155000 0 17155000 0 0 0 0 0 0 0 0 0 0 0 0 0 38885 2779 34696 324346;324347 256843;256844 256843 2 NSVERPAEPVAGAATPSLVEQQK Unmodified 2377.2238 0.22375194 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 57.59 57.707 3 1.6958E-44 65401 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 111.24 108.05 349610000 0 0 0 21331000 20405000 29693000 28289000 26140000 24204000 33122000 30075000 35038000 28561000 35741000 37016000 38886 4139 34697 324348;324349;324350;324351;324352;324353;324354;324355;324356;324357;324358;324359 256845;256846;256847;256848;256849;256850;256851;256852;256853;256854;256855;256856;256857;256858;256859;256860;256861;256862;256863;256864 256862 20 NSVEVALNK Unmodified 972.52401 0.52400971 1740 P54577 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.12 3.89 3 1 4 1 2 1 1 1 1 1 35.786 33.387 2 0.0020148 43418 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.06 76.167 1485100000 45058000 1334400000 16496000 0 9086700 12314000 10251000 0 0 0 0 0 0 0 57499000 38887 1740 34698 324360;324361;324362;324363;324364;324365;324366;324367 256865;256866;256867;256868;256869;256870;256871;256872;256873;256874;256875 256868 11 NSVFSVLDEEIAK Unmodified 1449.7351 0.73512469 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 90.144 87.74 2 0.0021307 109438 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.91 87.238 68560000 0 64317000 2070700 0 0 0 0 0 0 0 0 0 0 0 2172300 38888 5049 34699 324368;324369;324370 256876;256877 256876 2 NSVHEQEAINSDPELSNCENFQK Unmodified 2688.1722 0.17218666 3256 Q8IX90 SKA3 Spindle and kinetochore-associated protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 52.402 52.51 3 4.9327E-07 59323 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 52.79 45.344 30370000 0 0 0 0 3432700 0 0 0 0 7342800 8795500 0 4827600 5971100 0 38889 3256 34700 324371;324372;324373;324374;324375 256878;256879;256880;256881 256879 4 NSVLPMVYR Oxidation (M) 1093.559 0.559015 2932 Q6P3W7 SCYL2 SCY1-like protein 2 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 2 56.663 57.086 2 0.012977 64168 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.754 37.61 42499000 0 0 0 0 0 0 0 0 0 5811300 7379100 6901900 0 5957300 16449000 38890 2932 34701 324376;324377;324378;324379;324380;324381;324382 256882;256883;256884;256885 256884 4564 4 NSVLPMVYR Unmodified 1077.5641 0.56410038 2932 Q6P3W7 SCYL2 SCY1-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 68.803 68.932 2 0.034497 78235 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 66.429 45.87 4345300 0 0 0 0 0 0 0 0 0 0 0 0 4345300 0 0 38891 2932 34701 324383;324384 256886;256887 256886 2 NSVLSDPGLDSPR Unmodified 1355.6681 0.66810776 252 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 yes yes 0 0 0 By MS/MS 10 0 1 1 53.28 53.355 2 0.050149 60519 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 30.729 13.259 3189500 0 0 0 0 0 0 3189500 0 0 0 0 0 0 0 0 38892 252 34702 324385 256888 256888 1 NSVMELIANGTLNILEEENHIK Oxidation (M) 2496.253 0.25300316 4491 Q9HAV4 XPO5 Exportin-5 yes yes 0 1 0 By MS/MS 3 0 1 1 97.245 93.937 3 0.0015309 112654 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 41.45 38.174 4348300 0 4348300 0 0 0 0 0 0 0 0 0 0 0 0 0 38893 4491 34703 324386 256889 256889 5927 1 NSVMELIANGTLNILEEENHIK Unmodified 2480.2581 0.25808854 4491 Q9HAV4 XPO5 Exportin-5 yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 100.98 95.215 3 0.00045526 116224 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 42.612 38.174 10237000 7567200 2669600 0 0 0 0 0 0 0 0 0 0 0 0 0 38894 4491 34703 324387;324388 256890;256891 256890 2 NSVNSHTIGR Unmodified 1083.5421 0.54211939 2150 Q08188 TGM3 Protein-glutamine gamma-glutamyltransferase E;Protein-glutamine gamma-glutamyltransferase E 50 kDa catalytic chain;Protein-glutamine gamma-glutamyltransferase E 27 kDa non-catalytic chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 10.648 10.692 2 0.00088144 9248 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 118.18 86.243 79204000 0 0 0 26380000 6101600 4345700 4847400 15417000 0 7793200 0 14319000 0 0 0 38895 2150 34704 324389;324390;324391;324392;324393;324394;324395;324396;324397 256892;256893;256894;256895;256896;256897;256898;256899 256899 7 NSVPLSDALLNK Unmodified 1269.6929 0.69286595 1331 P33981 TTK Dual specificity protein kinase TTK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.429 71.501 2 2.9191E-05 82369 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 117.7 99.834 465660000 0 0 0 23230000 26641000 31711000 39079000 39555000 27393000 44968000 46331000 54578000 35593000 39010000 57573000 38896 1331 34705 324398;324399;324400;324401;324402;324403;324404;324405;324406;324407;324408;324409 256900;256901;256902;256903;256904;256905;256906;256907;256908;256909;256910;256911;256912 256908 11 NSVQTPVENSTNSQHQVK Unmodified 1995.961 0.96099532 4902 Q9UHI6 DDX20 Probable ATP-dependent RNA helicase DDX20 yes yes 0 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 3 1 27 23.157 2;3 8.9996E-37 30835 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.12 121.09 137140000 0 135260000 1878200 0 0 0 0 0 0 0 0 0 0 0 0 38897 4902 34706 324410;324411;324412;324413 256913;256914;256915;256916 256914 4 NSVSQISVLSGGK Unmodified 1274.683 0.68302954 256 O15143 ARPC1B Actin-related protein 2/3 complex subunit 1B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 56.978 55.654 2 6.3902E-20 71468 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 162.38 141.51 1604500000 54366000 1443400000 7050600 5402000 7223300 5585600 7640000 5657000 4635600 6115800 11712000 13992000 2482300 7956300 21298000 38898 256 34707 324414;324415;324416;324417;324418;324419;324420;324421;324422;324423;324424;324425;324426;324427;324428;324429 256917;256918;256919;256920;256921;256922;256923;256924;256925;256926;256927;256928;256929;256930;256931;256932 256920 14 NSVTGGTAAFEPSVDYCVVK Unmodified 2099.9834 0.98337024 1224 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.897 76.957 2 2.8403E-20 88486 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 92.063 80.828 46033000 0 0 0 996140 2383600 3737100 2016100 3527900 1985100 3469700 3893400 5309900 3177600 6715800 8820700 38899 1224 34708 324430;324431;324432;324433;324434;324435;324436;324437;324438;324439;324440;324441 256933;256934;256935;256936;256937;256938;256939 256934 7 NSVTPDMMEEMYK 2 Oxidation (M) 1605.6361 0.63608063 1508 P46777 RPL5 60S ribosomal protein L5 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.43 2.06 1 13 1 1 1 2 1 1 1 2 2 1 1 40.252 40.02 2 0.00058669 41971 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 61.56 55.588 68129000 0 16302000 0 3141000 3178900 5802100 4309700 2148700 0 4367800 11117000 13311000 4452400 0 0 38900 1508 34709 324442;324443;324444;324445;324446;324447;324448;324449;324450;324451;324452;324453;324454;324455 256940;256941;256942;256943;256944;256945;256946;256947;256948;256949;256950;256951 256947 2383;2384;2385 12 NSVTPDMMEEMYK Oxidation (M) 1589.6412 0.64116601 1508 P46777 RPL5 60S ribosomal protein L5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.97 2.68 4 27 4 2 2 1 3 3 1 2 2 4 2 3 2 57.124 56.466 2 5.1546E-21 66388 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.02 133.09 495380000 0 320220000 0 11799000 10296000 6902500 13479000 10648000 4091900 14786000 17500000 32947000 13899000 18411000 20398000 38901 1508 34709 324456;324457;324458;324459;324460;324461;324462;324463;324464;324465;324466;324467;324468;324469;324470;324471;324472;324473;324474;324475;324476;324477;324478;324479;324480;324481;324482;324483;324484;324485;324486 256952;256953;256954;256955;256956;256957;256958;256959;256960;256961;256962;256963;256964;256965;256966;256967;256968;256969;256970;256971;256972;256973;256974;256975;256976;256977;256978;256979;256980 256957 2383;2384;2385 29 NSVTPDMMEEMYK Unmodified 1573.6463 0.64625138 1508 P46777 RPL5 60S ribosomal protein L5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 73.382 72.684 2 4.1798E-09 90126 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.03 108.41 1302700000 0 1004600000 1632000 18899000 16738000 16444000 11685000 17248000 14308000 23328000 30969000 36407000 21135000 22385000 66943000 38902 1508 34709 324487;324488;324489;324490;324491;324492;324493;324494;324495;324496;324497;324498;324499;324500;324501 256981;256982;256983;256984;256985;256986;256987;256988;256989;256990;256991;256992;256993;256994;256995;256996 256984 15 NSVTPDMMEEMYK 3 Oxidation (M) 1621.631 0.63099525 1508 P46777 RPL5 60S ribosomal protein L5 yes yes 0 3 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 2 1 1 2 1 27.981 28.314 2 0.00050992 30144 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 72.643 65.515 53137000 0 0 0 0 0 2764300 6086400 2510500 0 5194100 9254000 6967300 8344500 7765100 4250700 38903 1508 34709 324502;324503;324504;324505;324506;324507;324508;324509;324510;324511;324512 256997;256998;256999;257000;257001 257001 2383;2384;2385 5 NSVTPDMMEEMYKK Unmodified 1701.7412 0.7412144 1508 P46777 RPL5 60S ribosomal protein L5 yes yes 0 0 1 By MS/MS 2 0 1 1 71.495 65.768 3 0.041231 83516 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 29.491 23.459 13481000 0 13481000 0 0 0 0 0 0 0 0 0 0 0 0 0 38904 1508 34710 324513 257002 257002 1 NSVTPLASPEPTK Unmodified 1339.6983 0.69834526 2640 Q16875 PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 42.396 42.5 2 6.9507E-08 48250 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 99.283 87.328 42994000 0 0 0 4214500 3760300 4694300 5815100 3880800 4069600 4362800 4030300 5003900 0 3162000 0 38905 2640 34711 324514;324515;324516;324517;324518;324519;324520;324521;324522;324523 257003;257004;257005;257006;257007;257008;257009;257010;257011;257012;257013 257012 11 NSVVEASEAAYK Unmodified 1266.6092 0.6091959 2109 Q04917 YWHAH 14-3-3 protein eta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 39.588 38.221 2 1.5123E-09 48704 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 143.96 109.71 1853100000 26661000 1527400000 6761800 11182000 7753000 14018000 14368000 9450400 6335200 14743000 41735000 43081000 15219000 32062000 82300000 38906 2109 34712 324524;324525;324526;324527;324528;324529;324530;324531;324532;324533;324534;324535;324536;324537;324538;324539;324540 257014;257015;257016;257017;257018;257019;257020;257021;257022;257023;257024;257025;257026;257027;257028;257029;257030;257031;257032 257020 19 NSYEREMFDK Unmodified 1317.566 0.56595087 4814;4517;3497 Q9P2D1;Q9HCK8;Q8TD26 CHD7;CHD8;CHD6 Chromodomain-helicase-DNA-binding protein 7;Chromodomain-helicase-DNA-binding protein 8;Chromodomain-helicase-DNA-binding protein 6 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.444 35.626 3 0.022975 39407 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 41.704 38.364 89164000 0 0 0 3939300 4104000 5840900 4967200 6795500 6101700 4704300 5421200 9293500 14005000 8980900 15011000 38907 4814;4517;3497 34713 324541;324542;324543;324544;324545;324546;324547;324548;324549;324550;324551;324552 257033 257033 1 NSYLEVLLK Unmodified 1077.607 0.60701105 2496 Q15084 PDIA6 Protein disulfide-isomerase A6 yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 83.535 83.598 2 0.0067432 96220 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.269 54.482 116140000 0 0 0 1256200 2375100 8015300 8299200 5586300 11430000 13985000 10531000 10238000 6841100 11821000 25762000 38908 2496 34714 324553;324554;324555;324556;324557;324558;324559;324560;324561;324562;324563;324564 257034;257035 257034 2 NSYNNSQAPSPGLGSK Unmodified 1619.754 0.75396265 4894 Q9UHB7 AFF4 AF4/FMR2 family member 4 yes yes 0 0 0 By MS/MS 2 0 1 1 34.269 29.556 2 2.8095E-05 38743 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.417 81.211 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38909 4894 34715 324565 257036 257036 1 NSYQDEDTAGGPPR Unmodified 1505.6383 0.63826419 2993 Q6XZF7 DNMBP Dynamin-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 23.008 23.155 2 1.0991E-11 24191 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 100.88 97.9 24067000 0 0 0 2120800 1708400 2757600 2303800 2027800 1218400 2259400 2977900 0 0 2320700 4372400 38910 2993 34716 324566;324567;324568;324569;324570;324571;324572;324573;324574;324575 257037;257038;257039;257040;257041;257042;257043;257044 257038 8 NSYTPVLNQFPQELNVGK Unmodified 2047.0375 0.037454724 216 O14795 UNC13B Protein unc-13 homolog B yes yes 0 0 0 By MS/MS 2 0 1 1 88.151 83.309 2 5.0562E-20 103581 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 148.68 136.3 23423000 0 23423000 0 0 0 0 0 0 0 0 0 0 0 0 0 38911 216 34717 324576 257045 257045 1 NSYVAGQYDDAASYQR Unmodified 1806.7809 0.78090569 947 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.102 47.267 2 3.2013E-27 52225 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 151.78 139.2 480760000 0 0 0 11805000 12616000 28174000 20909000 19015000 11797000 30499000 66036000 61243000 22397000 42739000 153530000 38912 947 34718 324577;324578;324579;324580;324581;324582;324583;324584;324585;324586;324587;324588 257046;257047;257048;257049;257050;257051;257052;257053;257054;257055;257056;257057 257049 12 NSYVMPNEPTTSNLQVGLWPEK Unmodified 2503.2053 0.20532469 2859 Q68DQ2 CRYBG3 Very large A-kinase anchor protein yes yes 0 0 0 By MS/MS 2 0 1 1 90.326 85.43 3 0.04184 106217 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 19.538 12.768 15037000 0 15037000 0 0 0 0 0 0 0 0 0 0 0 0 0 38913 2859 34719 324589 257058 257058 1 NTAAVLEAAQELLR Unmodified 1497.8151 0.81510635 4196 Q9BVQ7 SPATA5L1 Spermatogenesis-associated protein 5-like protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 93.923 94.064 2 0.007527 109082 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.019 31.802 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38914 4196 34720 324590 257059 257059 1 NTAELQPESGK Unmodified 1172.5673 0.56733108 275 O15355 PPM1G Protein phosphatase 1G yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 17.645 17.833 2 3.2563E-05 17372 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 135.86 120.71 286480000 0 0 0 13249000 12868000 15876000 14050000 11283000 11213000 23929000 28911000 47713000 31902000 27468000 48017000 38915 275 34721 324591;324592;324593;324594;324595;324596;324597;324598;324599;324600;324601;324602 257060;257061;257062;257063;257064;257065;257066;257067;257068;257069 257069 10 NTAEQFLSR Unmodified 1064.5251 0.52507234 895 P09884 POLA1 DNA polymerase alpha catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 50.115 45.291 2 0.0052302 59203 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.79 83.306 74353000 0 69809000 4544500 0 0 0 0 0 0 0 0 0 0 0 0 38916 895 34722 324603;324604 257070 257070 1 NTAEQFLSRSGYSEVNLSK Unmodified 2129.0389 0.038911287 895 P09884 POLA1 DNA polymerase alpha catalytic subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 78.234 72.285 3 8.0191E-11 92498 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.688 66.972 118300000 93453000 21290000 3556500 0 0 0 0 0 0 0 0 0 0 0 0 38917 895 34723 324605;324606;324607;324608 257071;257072;257073 257072 3 NTAEWLLSHTK Unmodified 1298.6619 0.66190017 728 P00491 PNP Purine nucleoside phosphorylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.47 3.72 6 13 2 2 2 1 1 2 2 2 1 2 2 68.574 67.017 2;3 4.2846E-08 88478 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 167.93 163.63 1551600000 865610000 508370000 36970000 2659400 0 1544900 0 6589400 0 0 12133000 23101000 1540900 15042000 77984000 38918 728 34724 324609;324610;324611;324612;324613;324614;324615;324616;324617;324618;324619;324620;324621;324622;324623;324624;324625;324626;324627 257074;257075;257076;257077;257078;257079;257080;257081;257082;257083;257084;257085;257086;257087;257088;257089 257075 11 NTAGGSNFDGLR Unmodified 1207.5582 0.55816338 1316 P32019 INPP5B Type II inositol 1,4,5-trisphosphate 5-phosphatase yes yes 0 0 0 By MS/MS 1 0 1 1 104.02 109.29 2 0.019387 89491 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 55.567 33.419 13972000 13972000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38919 1316 34725 324628 257090 257090 1 NTAIQESDASQGK Unmodified 1347.6266 0.62663688 2950 Q6PI26 SHQ1 Protein SHQ1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 14.108 14.208 2 0.0017074 13646 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 76.143 62.79 6697600 0 0 0 0 0 0 1629800 1401400 0 3666400 0 0 0 0 0 38920 2950 34726 324629;324630;324631 257091;257092;257093 257091 3 NTALHLACSK Unmodified 1113.5601 0.56007764 251;3386 O15084;Q8NB46 ANKRD28;ANKRD52 Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A;Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C no no 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 29.822 25.41 2 0.0055155 32308 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 103.08 70.956 297800000 252760000 0 45042000 0 0 0 0 0 0 0 0 0 0 0 0 38921 251;3386 34727 324632;324633 257094;257095 257095 0 NTAMDAQEALAR Oxidation (M) 1305.5983 0.59831364 3049 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.347 34.53 2 1.6677E-05 37271 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 100.88 43.289 201850000 0 0 0 10949000 11038000 16603000 14391000 11053000 15273000 16598000 42645000 21291000 13040000 11859000 17106000 38922 3049 34728 324634;324635;324636;324637;324638;324639;324640;324641;324642;324643;324644;324645 257096;257097;257098;257099;257100;257101 257099 4676 4 NTAPSLSSRK Unmodified 1059.5673 0.5672715 5078 Q9Y232 CDYL Chromodomain Y-like protein yes yes 0 0 1 By MS/MS 2 0 1 1 14.693 10.644 2 0.017519 15843 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.308 13.984 29126000 29126000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38923 5078 34729 324646 257102 257102 1 NTAQHLTVSGFSL Unmodified 1373.6939 0.69392858 3859 Q96GX5 MASTL Serine/threonine-protein kinase greatwall yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 79.424 79.524 2 0.00017087 92025 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 83.869 70.099 85756000 0 0 0 0 3038400 7439200 0 6109400 5712700 8996200 8794700 15549000 9285200 6067400 14763000 38924 3859 34730 324647;324648;324649;324650;324651;324652;324653;324654;324655;324656 257103;257104;257105;257106;257107;257108;257109;257110;257111;257112 257107 10 NTASQNSILEEGETK Unmodified 1619.7639 0.76385864 2529 Q15398 DLGAP5 Disks large-associated protein 5 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 39.721 40.035 2 1.5322E-27 43372 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 137.16 114.44 37549000 0 0 0 0 0 4376200 3097600 0 4221400 4462800 0 7351900 3837900 4006300 6194500 38925 2529 34731 324657;324658;324659;324660;324661;324662;324663;324664;324665 257113;257114;257115;257116;257117;257118 257114 5 NTCTSVYTK Unmodified 1072.4859 0.48590964 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15.092 14.566 2 0.0032704 14000 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 90.601 69.902 624880000 72375000 210320000 6286500 13827000 14125000 21162000 19649000 17301000 13434000 18711000 36437000 26793000 26013000 50937000 77516000 38926 1986 34732 324666;324667;324668;324669;324670;324671;324672;324673;324674;324675;324676;324677;324678;324679;324680 257119;257120;257121;257122;257123;257124;257125;257126;257127;257128;257129;257130;257131 257126 13 NTDEMVELR Oxidation (M) 1121.5023 0.50228798 1868 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 1 2 2 2 2 2 2 2 2 2 28.331 28.534 2 0.0030654 31252 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 86.136 71.6 1328400000 0 0 0 74822000 63940000 61783000 117390000 75444000 65424000 185930000 162530000 141490000 111100000 98056000 170520000 38927 1868 34733 324681;324682;324683;324684;324685;324686;324687;324688;324689;324690;324691;324692;324693;324694;324695;324696;324697;324698;324699;324700;324701;324702;324703 257132;257133;257134;257135;257136;257137;257138;257139;257140;257141;257142;257143;257144;257145;257146;257147;257148;257149;257150;257151 257132 3022 18 NTDEMVELR Unmodified 1105.5074 0.50737336 1868 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 44.185 44.357 2 0.0016844 48375 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 141.23 130.82 2484900000 0 0 0 106520000 96075000 205650000 119140000 136370000 101530000 253500000 256190000 228670000 197990000 220160000 563080000 38928 1868 34733 324704;324705;324706;324707;324708;324709;324710;324711;324712;324713;324714;324715 257152;257153;257154;257155;257156;257157;257158;257159;257160;257161;257162;257163;257164;257165;257166;257167;257168;257169;257170;257171 257159 20 NTDNSEDSRAEDNFNLEK Unmodified 2096.8883 0.88828388 3143 Q86U86 PBRM1 Protein polybromo-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 40.497 39.881 3 4.3363E-05 50728 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.768 65.489 134250000 0 35692000 0 6698800 5077300 9932400 7712900 6484100 0 10677000 10501000 9721000 9361800 8934500 13453000 38929 3143 34734 324716;324717;324718;324719;324720;324721;324722;324723;324724;324725;324726;324727;324728 257172;257173;257174;257175;257176;257177;257178;257179 257172 7 NTDQASMPDNTAAQK Unmodified 1590.6944 0.69439886 1356;1366 P35579;P35749 MYH9;MYH11 Myosin-9;Myosin-11 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.888 21.095 2 1.3045E-129 21814 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 207.95 196.79 500600000 0 0 0 36963000 33491000 30983000 34882000 22821000 28139000 53026000 50435000 83803000 36935000 39105000 50022000 38930 1356;1366 34735 324729;324730;324731;324732;324733;324734;324735;324736;324737;324738;324739;324740 257180;257181;257182;257183;257184;257185;257186;257187;257188;257189;257190;257191;257192;257193 257188 14 NTDQASMPDNTAAQK Oxidation (M) 1606.6893 0.68931349 1356;1366 P35579;P35749 MYH9;MYH11 Myosin-9;Myosin-11 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 8.1417 8.2946 2 0 6828 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 270.06 259.3 427010000 0 0 0 37290000 26115000 0 0 18037000 30228000 32732000 90558000 83238000 47801000 27028000 33987000 38931 1356;1366 34735 324741;324742;324743;324744;324745;324746;324747;324748;324749;324750 257194;257195;257196;257197;257198;257199;257200;257201;257202;257203 257201 2076 10 NTDQGVYLGLSK Unmodified 1293.6565 0.65648044 2251 Q13190 STX5 Syntaxin-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching 10 0 8 1 1 1 1 1 1 1 1 55.233 55.397 2 0.045439 62860 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 40.589 22.277 26228000 0 0 0 1455600 0 0 0 3009000 2551800 3573400 3885800 0 2372800 3455200 5924400 38932 2251 34736 324751;324752;324753;324754;324755;324756;324757;324758 257204 257204 1 NTDSDVNLVVPLEVIK Unmodified 1753.9462 0.9461801 3313 Q8N1G2 CMTR1 Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 90.24 90.383 2 0.0035776 104916 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 58.674 51.786 16791000 0 0 0 0 0 2321900 0 1667300 1822500 2999600 1733800 0 0 2487100 3758500 38933 3313 34737 324759;324760;324761;324762;324763;324764;324765 257205;257206 257206 2 NTDSVVIFSGEGSDELTQGYIYFHK Unmodified 2805.3134 0.31335481 864 P08243 ASNS Asparagine synthetase [glutamine-hydrolyzing] yes yes 0 0 0 By MS/MS 2 0 1 1 92.857 84.727 3 3.8634E-56 109737 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 123.32 120.33 82202000 82202000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38934 864 34738 324766 257207 257207 1 NTDVVATLK Unmodified 959.52876 0.52876073 3102 Q7Z4V5 HDGFRP2 Hepatoma-derived growth factor-related protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.745 39.924 2 0.025044 44238 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 85.744 48.585 335530000 0 0 0 21447000 23637000 24592000 27319000 17938000 26568000 30317000 33636000 34464000 27562000 27609000 40439000 38935 3102 34739 324767;324768;324769;324770;324771;324772;324773;324774;324775;324776;324777;324778 257208;257209;257210;257211;257212;257213;257214 257209 4 NTEAIGNEVTR Unmodified 1202.5891 0.58912916 1455 P42356 PI4KA Phosphatidylinositol 4-kinase alpha yes yes 0 0 0 By MS/MS 10 0 1 1 28.163 28.317 2 0.027229 30504 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 39.937 5.1343 3182800 0 0 0 0 0 0 0 0 0 3182800 0 0 0 0 0 38936 1455 34740 324779 257215 257215 1 NTEAVTLNFRGEK Unmodified 1477.7525 0.75250609 4963 Q9UKF6 CPSF3 Cleavage and polyadenylation specificity factor subunit 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 49.162 49.405 3 0.018416 55798 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 36.292 23.092 170150000 0 0 0 0 6576100 24561000 11084000 0 0 20213000 13346000 30707000 18199000 17053000 28410000 38937 4963 34741 324780;324781;324782;324783;324784;324785;324786;324787;324788 257216;257217;257218;257219 257219 4 NTEDEILK Unmodified 960.47639 0.47639081 4010 Q99459 CDC5L Cell division cycle 5-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 32.263 32.159 2 0.038354 35636 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 51.059 8.1901 82584000 0 0 0 15019000 14458000 19532000 0 0 12138000 21436000 0 0 0 0 0 38938 4010 34742 324789;324790;324791;324792;324793 257220;257221 257220 2 NTEDITFPSVYVGLK Unmodified 1681.8563 0.85630246 646 O95361 TRIM16 Tripartite motif-containing protein 16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.25 3.34 2 1 1 2 1 1 89.38 86.778 2 1.0764E-37 107758 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 165.58 143.58 364390000 0 359320000 2502900 0 0 0 0 0 0 0 0 0 0 0 2569700 38939 646 34743 324794;324795;324796;324797 257222;257223;257224;257225;257226 257222 5 NTEDLTEEWLREK Unmodified 1661.7897 0.78967946 1823 P60983 GMFB Glia maturation factor beta yes yes 0 0 1 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 71.821 72.042 3 0.024775 82241 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.925 29.201 23538000 0 0 0 0 0 2802300 0 1298700 0 0 0 4870000 0 0 14567000 38940 1823 34744 324798;324799;324800;324801 257227 257227 1 NTEEEGLK Unmodified 918.42944 0.42944062 4742 Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 9.1015 9.2237 2 0.032623 7795 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 54.205 23.593 23251000 0 0 0 1491900 1554400 2335600 2578900 2370800 2271200 1112100 2913000 0 1871300 1722800 3028800 38941 4742 34745 324802;324803;324804;324805;324806;324807;324808;324809;324810;324811;324812 257228 257228 1 NTELAVFHDETEIQNQTDLLSLSGK Unmodified 2801.3719 0.37193232 1441 P41252 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 90.477 86.027 3 3.2751E-151 108415 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 189.52 186.9 98068000 52797000 37437000 7834600 0 0 0 0 0 0 0 0 0 0 0 0 38942 1441 34746 324813;324814;324815;324816;324817 257229;257230;257231;257232;257233;257234 257232 6 NTENNDVEISETK Unmodified 1491.6689 0.66889562 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 25.135 25.272 2 2.8981E-22 25421 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 158.05 134.69 131460000 0 0 0 0 18985000 18772000 19777000 0 15907000 16529000 0 0 0 22476000 19010000 38943 2804 34747 324818;324819;324820;324821;324822;324823;324824;324825;324826;324827;324828;324829 257235;257236;257237;257238;257239;257240;257241;257242;257243;257244;257245;257246;257247;257248 257244 14 NTESSAFGGSLPAK Unmodified 1364.6572 0.65720872 3098 Q7Z4H7 HAUS6 HAUS augmin-like complex subunit 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 47.311 46.826 2 8.1739E-30 59388 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 144.65 72.1 179440000 0 77983000 0 0 8025500 0 9966100 0 0 16597000 17895000 16317000 0 12238000 20419000 38944 3098 34748 324830;324831;324832;324833;324834;324835;324836;324837 257249;257250;257251 257250 3 NTEYFNQLK Unmodified 1155.556 0.55603811 4334 Q9H0P0 NT5C3A Cytosolic 5'-nucleotidase 3A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.322 49.48 2 0.0031288 54759 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 133.68 126.62 225530000 0 0 0 23223000 9849000 15182000 12759000 18175000 11650000 22185000 18917000 29792000 27644000 14964000 21187000 38945 4334 34749 324838;324839;324840;324841;324842;324843;324844;324845;324846;324847;324848;324849 257252;257253;257254;257255;257256;257257;257258;257259;257260;257261;257262;257263;257264;257265 257257 13 NTEYPLNLPVEDIQK Unmodified 1771.8992 0.89922991 2376 Q14149 MORC3 MORC family CW-type zinc finger protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.133 82.195 2 3.5514E-14 94852 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 99.5 78.547 58643000 0 0 0 1786600 3488700 5338900 3077100 3005700 3190300 5983100 5217800 5984700 3363200 7061500 11145000 38946 2376 34750 324850;324851;324852;324853;324854;324855;324856;324857;324858;324859;324860;324861 257266;257267;257268;257269;257270;257271;257272;257273;257274;257275 257269 10 NTFDHPYPTTK Unmodified 1319.6146 0.61461563 1864 P61962 DCAF7 DDB1- and CUL4-associated factor 7 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 32.316 32.502 2;3 8.3307E-05 34293 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.93 87.578 369110000 0 0 0 21083000 17132000 20020000 26474000 30026000 23668000 33911000 36796000 49870000 29523000 30579000 50029000 38947 1864 34751 324862;324863;324864;324865;324866;324867;324868;324869;324870;324871;324872;324873;324874;324875;324876;324877;324878;324879;324880;324881;324882;324883;324884;324885 257276;257277;257278;257279;257280;257281;257282;257283;257284;257285;257286;257287;257288 257280 9 NTFQEDGSGMK Unmodified 1212.5081 0.50810164 2750 Q5PRF9 SAMD4B Protein Smaug homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.647 23.852 2 0.0084175 24060 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.414 54.361 45925000 0 0 0 3592700 3326300 4381400 2298800 2635800 2537800 3764200 4176200 4334200 3843000 4500900 6534200 38948 2750 34752 324886;324887;324888;324889;324890;324891;324892;324893;324894;324895;324896;324897 257289;257290;257291;257292;257293;257294 257290 6 NTFQGIYSDQK Unmodified 1299.6095 0.60953025 5061 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 49.991 44.284 2 0.00077957 57608 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.97 103.48 227080000 0 227080000 0 0 0 0 0 0 0 0 0 0 0 0 0 38949 5061 34753 324898;324899 257295;257296 257296 2 NTFSSGSDLNAVK Unmodified 1338.6416 0.64155866 4638 Q9NTX5 ECHDC1 Ethylmalonyl-CoA decarboxylase yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 45.323 42.714 2 1.9293E-08 54983 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.93 90.062 93641000 0 85047000 0 0 0 0 0 0 0 0 0 0 8594700 0 0 38950 4638 34754 324900;324901 257297;257298 257297 2 NTFYETLPVAINGNGPTK Unmodified 1934.9738 0.97379183 159 O00469 PLOD2 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 yes yes 0 0 0 By MS/MS 2 0 2 2 85.813 81.039 2;3 1.5178E-304 100762 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 275.82 269.87 205070000 0 205070000 0 0 0 0 0 0 0 0 0 0 0 0 0 38951 159 34755 324902;324903 257299;257300 257300 2 NTGIICTIGPASR Unmodified 1358.6976 0.69763375 1000 P14618 PKM Pyruvate kinase PKM yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.58 1.79 1 18 1 2 1 1 1 1 2 2 2 2 1 2 1 59.689 59.322 2 9.4349E-13 66605 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 163.9 143.76 3169900000 8529900 0 0 205080000 157630000 148960000 185060000 221390000 214500000 183930000 414870000 548380000 100900000 239500000 541220000 38952 1000 34756 324904;324905;324906;324907;324908;324909;324910;324911;324912;324913;324914;324915;324916;324917;324918;324919;324920;324921;324922 257301;257302;257303;257304;257305;257306;257307;257308;257309;257310;257311;257312;257313;257314;257315;257316;257317;257318;257319;257320;257321;257322;257323;257324;257325;257326 257307 25 NTGTEAPDYLATVDVDPK Unmodified 1904.9004 0.90035212 2256 Q13228 SELENBP1 Selenium-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 75.648 75.728 2 2.6176E-39 86869 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 138.55 124.1 132790000 0 0 0 2668800 0 0 0 0 0 0 24448000 19749000 0 16045000 69882000 38953 2256 34757 324923;324924;324925;324926;324927 257327;257328;257329;257330;257331 257327 5 NTGVILANDANAERLK Unmodified 1697.906 0.90604662 1497 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes yes 0 0 1 By MS/MS 2 0 1 1 57.55 53.724 3 0.044423 66930 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 29.129 16.769 6529000 0 0 6529000 0 0 0 0 0 0 0 0 0 0 0 0 38954 1497 34758 324928 257332 257332 1 NTGVSPASRPSPGTPTSPSNLTSGLK Unmodified 2509.2772 0.27724408 2810 Q5VT52 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 59.073 59.183 3 1.3651E-96 67266 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 147.17 134.87 1154200000 0 0 0 62768000 67620000 73219000 96700000 90972000 71613000 128330000 122470000 162600000 109340000 79889000 88669000 38955 2810 34759 324929;324930;324931;324932;324933;324934;324935;324936;324937;324938;324939;324940;324941 257333;257334;257335;257336;257337;257338;257339;257340;257341;257342;257343;257344;257345;257346;257347 257345 15 NTHATTHNAYDLEVIDIFK Unmodified 2201.0753 0.075296793 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 0 0 By MS/MS 1.5 0.5 1 1 2 100.58 99.142 3;4 5.4412E-05 95696 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 58.479 49.879 31649000 31649000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38956 894 34760 324942;324943 257348;257349 257348 1 NTHCSSLPHYQK Unmodified 1470.6674 0.66739625 1473 P43243 MATR3 Matrin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 5.67 3.89 4 1 4 2 2 1 1 1 1 1 20.091 17.77 2;3 1.1083E-06 23321 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 114.4 92.938 1400300000 1231200000 52302000 6095500 23292000 33351000 0 33943000 0 20166000 0 0 0 0 0 0 38957 1473 34761 324944;324945;324946;324947;324948;324949;324950;324951;324952 257350;257351;257352;257353;257354;257355;257356;257357 257356 8 NTHQSGRLEETAGK Unmodified 1526.7437 0.74373232 3312 Q8N1G0 ZNF687 Zinc finger protein 687 yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 7.5094 7.0761 2;3 0.00025639 4071 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 72.321 51.021 182170000 66236000 0 0 5705900 4255700 7892700 4902300 8521200 7997800 10743000 16753000 8437700 12767000 12930000 15030000 38958 3312 34762 324953;324954;324955;324956;324957;324958;324959;324960;324961;324962;324963;324964;324965;324966 257358;257359;257360;257361;257362;257363;257364;257365;257366;257367;257368 257366 11 NTIEETGNLAEQAR Unmodified 1544.7431 0.74306362 933 P11047 LAMC1 Laminin subunit gamma-1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 45.314 45.425 2 0.003017 50989 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 49.28 23.894 104080000 0 0 0 7156800 4881000 13445000 7106800 0 10531000 8257900 15725000 0 11599000 8591800 16790000 38959 933 34763 324967;324968;324969;324970;324971;324972;324973;324974;324975;324976 257369;257370;257371 257370 3 NTISLLVAGLK Unmodified 1127.6914 0.69140938 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 86.247 86.315 2 0.00047862 99622 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 83.948 44.643 115760000 0 0 0 2649300 5131000 9337600 4970100 9194100 8701900 14534000 8662100 11610000 5639600 10093000 25240000 38960 2392 34764 324977;324978;324979;324980;324981;324982;324983;324984;324985;324986;324987;324988 257372;257373;257374;257375;257376;257377;257378;257379;257380;257381;257382 257375 11 NTITVSPFSGESDICPQDSSTNIHELR Unmodified 3003.388 0.38799309 3736 Q96AD5 PNPLA2 Patatin-like phospholipase domain-containing protein 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 77.797 77.962 3 3.3625E-32 89951 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 84.68 78.714 27797000 0 0 0 0 0 0 0 5832000 5236500 9938600 6789800 0 0 0 0 38961 3736 34765 324989;324990;324991;324992 257383;257384;257385 257385 3 NTIVETLK Unmodified 916.52295 0.52294707 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.539 42.715 2 0.0068621 47569 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 93.429 41.641 539760000 0 0 0 31140000 39685000 31831000 48714000 52249000 35857000 39477000 59601000 52976000 59049000 40124000 49059000 38962 2556 34766 324993;324994;324995;324996;324997;324998;324999;325000;325001;325002;325003;325004 257386;257387;257388;257389;257390;257391;257392;257393;257394 257391 8 NTKHEISEMNR Unmodified 1357.6408 0.64084715 74 CON__P13647;P13647 KRT5 Keratin, type II cytoskeletal 5 no no 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 10.545 10.654 3 0.00031659 9543 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 82.171 72.516 + 51364000 0 0 0 8214200 1681300 677310 1476700 6993000 0 1891500 3613200 19351000 5549800 1916100 0 38963 74 34767 325005;325006;325007;325008;325009;325010;325011;325012;325013;325014 257395;257396;257397;257398 257396 4 NTKHEISEMNR Oxidation (M) 1373.6358 0.63576177 74 CON__P13647;P13647 KRT5 Keratin, type II cytoskeletal 5 no no 0 1 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 5.6304 5.7532 3 0.00047741 3336 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 73.082 59.682 + 46964000 0 0 0 16007000 0 2808200 3176000 6083800 4018200 0 665510 892670 7954700 0 5357700 38964 74 34767 325015;325016;325017;325018;325019;325020;325021;325022;325023 257399;257400 257400 98 2 NTKQEIAEINR Unmodified 1314.6892 0.68917755 66;58;779;80 P04259;CON__P50446;CON__P02538;P02538;CON__P04259 KRT6B;KRT6A Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 6A no no 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 25.67 25.849 3 0.045194 27675 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 43.68 25.871 + 34983000 0 0 0 0 0 0 23384000 0 0 0 0 0 11600000 0 0 38965 779;80;58;66 34768 325024;325025 257401 257401 0 NTKSEIAELNR Unmodified 1273.6626 0.66262845 77 CON__P19013;P19013 KRT4 Keratin, type II cytoskeletal 4 yes no 0 0 1 By MS/MS 10 0 1 1 28.789 29.127 3 0.014598 31358 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 32.159 18.35 + 7901500 0 0 0 0 0 0 0 0 0 0 0 0 7901500 0 0 38966 77 34769 325026 257402 257402 1 NTKVEISELNR Unmodified 1301.6939 0.69392858 50 CON__ENSEMBL:ENSBTAP00000038253 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 43.16 43.357 3 1.4639E-05 49206 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 99.343 0 + 415930000 0 0 0 213590000 0 0 52565000 0 0 0 64046000 0 0 41014000 44714000 38967 50 34770 325027;325028;325029;325030;325031 257403;257404;257405;257406;257407 257407 4 NTKVEISELNRVIQR Unmodified 1798.0061 0.006095016 50 CON__ENSEMBL:ENSBTAP00000038253 yes yes 0 0 2 By MS/MS 10 0 1 1 68.072 68.472 4 0.018647 78462 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 33.265 0 + 10988000 0 0 0 0 0 0 0 0 0 0 0 10988000 0 0 0 38968 50 34771 325032 257408 257408 1 NTLADAVDK Unmodified 945.47673 0.47672516 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 30.644 30.097 2 0.009147 37993 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.136 53.883 69030000 0 40267000 0 0 4290000 6769000 4411000 0 3334700 0 0 5368800 4589800 0 0 38969 5189 34772 325033;325034;325035;325036;325037;325038;325039 257409;257410 257410 2 NTLDLRQQNGTASSRK Unmodified 1787.9238 0.92382195 3686 Q92917 GPKOW G patch domain and KOW motifs-containing protein yes yes 0 0 2 By MS/MS 2 0 1 1 26.693 21.47 3 0.017297 30288 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.338 30.569 12541000 12541000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38970 3686 34773 325040 257411;257412 257411 2 NTLETSSLNFK Unmodified 1252.6299 0.62993134 2377 Q14151 SAFB2 Scaffold attachment factor B2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 57.804 57.922 2 1.4114E-05 66176 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 157.96 130.7 166380000 0 0 0 12226000 12937000 10428000 14354000 10904000 9658500 13297000 12933000 21739000 13468000 17440000 16991000 38971 2377 34774 325041;325042;325043;325044;325045;325046;325047;325048;325049;325050;325051;325052 257413;257414;257415;257416;257417;257418;257419;257420;257421;257422;257423;257424;257425;257426 257422 14 NTLEWCLPVIDAK Unmodified 1557.7861 0.78611441 1538 P48444 ARCN1 Coatomer subunit delta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 89.319 89.452 2 4.0053E-07 103611 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 116.55 105.33 22598000 0 0 0 0 0 1671700 692640 1319500 1592000 4604600 0 0 928470 2365300 9423400 38972 1538 34775 325053;325054;325055;325056;325057;325058;325059;325060;325061 257427;257428;257429;257430;257431 257429 5 NTLFNLSNFLDK Unmodified 1424.73 0.72997974 2300 Q13492 PICALM Phosphatidylinositol-binding clathrin assembly protein no no 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 93.38 93.538 2 0.011563 108472 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.158 30.492 10025000 0 0 0 0 0 0 0 811950 498290 1414800 1268100 0 0 948500 5083400 38973 2300 34776 325062;325063;325064;325065;325066;325067 257432 257432 1 NTLGSDLPR Unmodified 971.50361 0.50360861 2430 Q14680 MELK Maternal embryonic leucine zipper kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 40.333 40.379 2 0.040615 43658 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 44.349 14.182 32949000 0 0 0 3429100 0 4025300 0 7035600 4987000 6940500 0 0 0 6531200 0 38974 2430 34777 325068;325069;325070;325071;325072;325073 257433 257433 1 NTLIMGLGTQGAEK Oxidation (M) 1447.7341 0.73407884 3211 Q86YT6 MIB1 E3 ubiquitin-protein ligase MIB1 yes yes 0 1 0 By MS/MS 2 0 1 1 63.136 57.242 2 0.0019785 73470 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.043 59.297 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38975 3211 34778 325074 257434 257434 4829 1 NTLIMGLGTQGAEK Unmodified 1431.7392 0.73916421 3211 Q86YT6 MIB1 E3 ubiquitin-protein ligase MIB1 yes yes 0 0 0 By MS/MS 10 0 1 1 67.602 68.12 2 0.016646 77443 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.847 3.6222 13905000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13905000 38976 3211 34778 325075 257435 257435 1 NTLISASQQLK Unmodified 1201.6667 0.6666512 253 O15111 CHUK Inhibitor of nuclear factor kappa-B kinase subunit alpha yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 56.166 49.874 2 0.0019026 64810 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.19 68.487 99235000 7105300 92130000 0 0 0 0 0 0 0 0 0 0 0 0 0 38977 253 34779 325076;325077;325078 257436;257437 257436 2 NTLLSQISTK Unmodified 1103.6186 0.61863837 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 59.999 58.966 2 0.005088 66685 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 70.363 9.646 104440000 13858000 16792000 0 4302300 4021300 4926100 6425300 5994000 6147900 6676100 9208200 9700000 8600600 7786500 0 38978 2446 34780 325079;325080;325081;325082;325083;325084;325085;325086;325087;325088;325089;325090;325091 257438;257439;257440;257441;257442;257443;257444;257445;257446;257447 257444 10 NTLPDMNTSEMEK Unmodified 1508.6487 0.64869423 398 O60343 TBC1D4 TBC1 domain family member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 52.392 52.607 2 4.0705E-08 59283 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 126.19 103.55 75039000 0 0 0 0 2139200 9486900 3040000 4229400 3204200 8168000 11271000 8694300 4208600 4823700 15774000 38979 398 34781 325092;325093;325094;325095;325096;325097;325098;325099;325100;325101;325102 257448;257449;257450;257451;257452;257453;257454;257455;257456;257457;257458 257453 11 NTLTNIAMRPGLEGYALPR Oxidation (M) 2102.0943 0.094258096 1333 P33992 MCM5 DNA replication licensing factor MCM5 yes yes 0 1 1 By MS/MS 10 0 1 1 77.69 77.955 3 1.7514E-08 89594 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.511 75.158 15499000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15499000 38980 1333 34782 325103 257459 257459 2002 1 NTLTQTTENLR Unmodified 1289.6575 0.65754307 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.604 41.781 2 6.5523E-48 46866 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 190.02 107.56 762720000 0 0 0 122840000 44306000 30474000 46708000 177500000 25354000 37518000 65620000 64258000 72930000 31797000 43410000 38981 1029 34783 325104;325105;325106;325107;325108;325109;325110;325111;325112;325113;325114;325115 257460;257461;257462;257463;257464;257465;257466;257467;257468;257469;257470;257471;257472;257473;257474 257467 14 NTLTQTTENLRR Unmodified 1445.7587 0.7586541 1029 P15924 DSP Desmoplakin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 36.655 36.725 3 0.011699 41171 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 45.257 42.732 55600000 0 0 0 12018000 4038800 2829200 4278200 13782000 1833800 4087900 3644300 0 6036100 3051900 0 38982 1029 34784 325116;325117;325118;325119;325120;325121;325122;325123;325124;325125 257475;257476 257476 0 NTLTTGVEEIR Unmodified 1231.6408 0.64083038 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.145 52.291 2 2.5397E-05 59145 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 140.16 78.202 376160000 0 0 0 14220000 29268000 23230000 27701000 28524000 21834000 35458000 36529000 53449000 31264000 32882000 41798000 38983 3023 34785 325126;325127;325128;325129;325130;325131;325132;325133;325134;325135;325136;325137 257477;257478;257479;257480;257481;257482;257483 257477 6 NTMAYIGFVEEK Oxidation (M) 1416.6595 0.65951691 3865 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 71.178 68.43 2 5.6875E-05 86589 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.522 74.668 37055000 0 31987000 1379500 0 0 0 0 0 0 0 0 0 0 3688300 0 38984 3865 34786 325138;325139;325140;325141;325142;325143 257484;257485;257486;257487;257488 257486 5375 5 NTMAYIGFVEEK Unmodified 1400.6646 0.66460229 3865 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 81.616 76.287 2 3.1732E-05 98077 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 103.08 79.053 10699000 7984600 0 2714000 0 0 0 0 0 0 0 0 0 0 0 0 38985 3865 34786 325144;325145 257489;257490 257489 2 NTNAAEESLPEIQK Unmodified 1542.7526 0.75256567 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.34 1 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 55.709 55.246 2 2.1028E-60 57674 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 178.81 164.12 599210000 37963000 32116000 0 26285000 28069000 46236000 33886000 39725000 24526000 51918000 49770000 70524000 46557000 44859000 66778000 38986 4634 34787 325146;325147;325148;325149;325150;325151;325152;325153;325154;325155;325156;325157;325158;325159;325160 257491;257492;257493;257494;257495;257496;257497;257498;257499;257500;257501;257502;257503;257504;257505;257506 257496 15 NTNAETRETLQELYK Unmodified 1808.8905 0.89045614 2274 Q13356 PPIL2 Peptidyl-prolyl cis-trans isomerase-like 2 yes yes 0 0 1 By MS/MS 2 0 1 1 59.695 55.911 3 0.00035057 69594 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 59.261 41.344 13108000 0 0 13108000 0 0 0 0 0 0 0 0 0 0 0 0 38987 2274 34788 325161 257507 257507 1 NTNDANSCQIIIPQNQVNR Unmodified 2198.0498 0.049827099 1620;1294 P50395;P31150 GDI2;GDI1 Rab GDP dissociation inhibitor beta;Rab GDP dissociation inhibitor alpha no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 58.134 58.565 3 0.01231 66031 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.667 28.563 27364000 0 0 0 0 0 0 0 0 0 0 7251200 4080200 0 4709400 11323000 38988 1620;1294 34789 325162;325163;325164;325165 257508 257508 0 NTNDANSCQIIIPQNQVNRK Unmodified 2326.1448 0.14479012 1620;1294 P50395;P31150 GDI2;GDI1 Rab GDP dissociation inhibitor beta;Rab GDP dissociation inhibitor alpha no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.56 3.86 3 1 5 1 2 1 1 1 1 1 1 51.633 49.269 3 2.6756E-82 63725 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 147.6 143.41 567470000 41536000 348670000 10013000 23482000 0 0 0 0 0 0 23030000 22462000 0 26388000 71883000 38989 1620;1294 34790 325166;325167;325168;325169;325170;325171;325172;325173;325174 257509;257510;257511;257512;257513;257514;257515;257516;257517;257518;257519;257520 257509 12 NTNEEDDEVREAMTR Oxidation (M) 1823.7592 0.75918397 1614 P49959 MRE11A Double-strand break repair protein MRE11A yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 1 2 2 1 1 1 2 2 1 2 22.182 22.431 3 2.5517E-05 22096 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.678 68.271 169540000 0 0 0 6452100 7779300 21430000 14986000 0 6387900 14069000 13239000 33400000 26565000 6454000 18775000 38990 1614 34791 325175;325176;325177;325178;325179;325180;325181;325182;325183;325184;325185;325186;325187;325188;325189;325190 257521;257522;257523;257524;257525;257526;257527;257528;257529;257530;257531;257532;257533;257534;257535 257524 2597 15 NTNEEDDEVREAMTR Unmodified 1807.7643 0.76426934 1614 P49959 MRE11A Double-strand break repair protein MRE11A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.348 39.528 3 7.7565E-21 44367 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 100.45 97.198 299350000 0 0 0 25108000 14779000 24577000 15807000 21443000 17303000 28097000 36927000 24507000 24850000 18440000 47510000 38991 1614 34791 325191;325192;325193;325194;325195;325196;325197;325198;325199;325200;325201;325202 257536;257537;257538;257539;257540;257541;257542;257543;257544;257545;257546;257547;257548;257549 257548 14 NTNEEDDEVREAMTRAR Unmodified 2034.9025 0.90249416 1614 P49959 MRE11A Double-strand break repair protein MRE11A yes yes 0 0 2 By MS/MS By MS/MS 2 0 3 2 1 51.6 44.952 3;4 0.00020524 61442 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.285 68.373 35025000 27847000 0 7178000 0 0 0 0 0 0 0 0 0 0 0 0 38992 1614 34792 325203;325204;325205 257550;257551;257552 257550 3 NTNEMFAIK Unmodified 1066.5117 0.51173046 2604 Q16513 PKN2 Serine/threonine-protein kinase N2 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 54.708 54.837 2 0.0095702 63259 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 66.351 48.316 152610000 0 0 0 6533800 9657400 17380000 10210000 11198000 7022600 20135000 22087000 12819000 15700000 0 19868000 38993 2604 34793 325206;325207;325208;325209;325210;325211;325212;325213;325214;325215;325216 257553;257554 257554 2 NTNEMFAIK Oxidation (M) 1082.5066 0.50664508 2604 Q16513 PKN2 Serine/threonine-protein kinase N2 yes yes 0 1 0 By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 38.551 38.128 2 0.029999 41165 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.185 27.803 128480000 0 82885000 0 0 3619100 7105400 6156200 0 3879900 7300400 0 0 6753500 2998300 7785400 38994 2604 34793 325217;325218;325219;325220;325221;325222;325223;325224;325225 257555;257556 257556 2 NTNGSQFFITTVPTPHLDGK Unmodified 2173.0804 0.080382171 2162 Q08752 PPID Peptidyl-prolyl cis-trans isomerase D yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 82.309 82.455 3 6.1344E-37 95089 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 105.38 101.66 74839000 0 0 0 0 0 3574800 2022500 3400500 3805100 8044900 5488500 5444300 0 9499000 33559000 38995 2162 34794 325226;325227;325228;325229;325230;325231;325232;325233;325234 257557;257558;257559;257560;257561;257562;257563;257564 257559 8 NTNPNFVR Unmodified 960.47773 0.47772821 1356;1357 P35579;P35580 MYH9;MYH10 Myosin-9;Myosin-10 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 25.396 25.598 2 0.0025033 27743 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 148.33 103.61 3086000000 0 0 0 216180000 255380000 326730000 263430000 292220000 150960000 303740000 243710000 275730000 276120000 171660000 310110000 38996 1356;1357 34795 325235;325236;325237;325238;325239;325240;325241;325242;325243;325244;325245;325246 257565;257566;257567;257568;257569;257570;257571;257572;257573;257574;257575;257576;257577;257578;257579;257580;257581 257580 17 NTNSPEFDQLFK Unmodified 1438.6729 0.67285879 2765 Q5T0F9 CC2D1B Coiled-coil and C2 domain-containing protein 1B yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 79.862 77.642 2 2.91E-24 96273 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 172.98 139.11 111280000 0 101610000 0 0 0 0 0 0 0 0 0 0 0 0 9664900 38997 2765 34796 325247;325248 257582;257583;257584 257582 3 NTNTINNGTQQQAQSMTTTIKPGDDWK Unmodified 2991.3992 0.39922648 1199 P26196 DDX6 Probable ATP-dependent RNA helicase DDX6 yes yes 0 0 1 By matching By matching By MS/MS 10 0 3 1 1 1 62.261 62.616 3 0.00052188 70911 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 28.145 21.496 17647000 0 0 0 0 0 0 0 0 0 3176000 4885800 0 0 0 9585200 38998 1199 34797 325249;325250;325251 257585 257585 1 NTNVEDVLNAR Unmodified 1243.6157 0.61567826 3927 Q96MW1 CCDC43 Coiled-coil domain-containing protein 43 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 54.85 55.482 2 0.00030645 62606 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 107.21 84.134 27289000 0 0 0 0 0 0 0 0 0 0 0 13153000 0 0 14136000 38999 3927 34798 325252;325253 257586;257587 257587 2 NTNVEDVLNARK Unmodified 1371.7106 0.71064128 3927 Q96MW1 CCDC43 Coiled-coil domain-containing protein 43 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 46.138 46.178 3 0.00021594 50622 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.224 48.426 93840000 0 0 0 4566700 3767900 7134100 7095000 0 6385800 13760000 0 0 0 16094000 35036000 39000 3927 34799 325254;325255;325256;325257;325258;325259;325260;325261;325262 257588;257589;257590;257591;257592;257593;257594;257595;257596 257591 9 NTPAFFAER Unmodified 1051.5087 0.50869399 1643 P50995 ANXA11 Annexin A11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 55.846 56.142 2 0.032784 63487 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 47.198 28.422 198230000 0 0 0 0 0 22882000 0 13919000 7421400 28223000 21972000 25795000 0 30941000 47075000 39001 1643 34800 325263;325264;325265;325266;325267;325268;325269;325270 257597 257597 1 NTPAFFAERLNK Unmodified 1406.7306 0.73064844 1643 P50995 ANXA11 Annexin A11 yes yes 0 0 1 By MS/MS 2 0 1 1 73.566 65.37 3 0.038396 86576 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 38.674 27.768 15054000 15054000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39002 1643 34801 325271 257598 257598 1 NTPENLHEMAK Oxidation (M) 1298.5925 0.59249998 2704 Q53H82 LACTB2 Beta-lactamase-like protein 2 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 13.94 11.143 3 0.017648 14580 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 42.031 29.075 105280000 0 92685000 12597000 0 0 0 0 0 0 0 0 0 0 0 0 39003 2704 34802 325272;325273 257599 257599 4354 1 NTPENLHEMAK Unmodified 1282.5976 0.59758535 2704 Q53H82 LACTB2 Beta-lactamase-like protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 28.27 23.965 2 0.036512 31820 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 56.013 23.173 44614000 0 44614000 0 0 0 0 0 0 0 0 0 0 0 0 0 39004 2704 34802 325274 257600 257600 1 NTPSFLIACNK Unmodified 1263.6282 0.6281572 5240 Q9Y5M8 SRPRB Signal recognition particle receptor subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 64.252 64.326 2 0.0076229 72838 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 53.327 46.308 18100000 0 0 0 0 3458400 0 0 0 0 0 0 6479800 4321400 3840800 0 39005 5240 34803 325275;325276;325277;325278 257601;257602;257603;257604 257601 3 NTPSISEEQIK Unmodified 1244.6248 0.62484596 4442 Q9H814 PHAX Phosphorylated adapter RNA export protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.821 40 2 0.00055755 44673 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 81.338 45.827 243450000 0 0 0 8145100 10291000 10917000 11232000 11152000 12108000 19579000 32097000 31369000 30359000 27178000 39019000 39006 4442 34804 325279;325280;325281;325282;325283;325284;325285;325286;325287;325288;325289;325290 257605;257606;257607;257608;257609;257610;257611;257612;257613;257614 257605 10 NTPSPDVTLGTNPGTEDIQFPIQK Unmodified 2568.2708 0.27076172 3252 Q8IX01 SUGP2 SURP and G-patch domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 84.075 83.727 3 1.1063E-09 97304 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 61.963 50.365 122110000 0 39291000 0 0 4593300 4262600 0 9819800 8408700 15452000 9481300 10560000 7694900 4326700 8221700 39007 3252 34805 325291;325292;325293;325294;325295;325296;325297;325298;325299;325300;325301 257615;257616;257617;257618;257619;257620;257621;257622;257623 257622 9 NTPSPFIETFTEDDEASR Unmodified 2054.9069 0.90689406 1540 P48506 GCLC Glutamate--cysteine ligase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 80.993 81.057 2 1.2522E-11 93298 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.707 77.912 29519000 0 0 0 0 4629600 0 0 0 0 0 8451500 0 0 4336100 12102000 39008 1540 34806 325302;325303;325304;325305 257624;257625;257626 257624 3 NTPVQSPVSLGEDLQWWPDK Unmodified 2295.1172 0.11716161 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 0 0 By MS/MS 2 0 1 1 96.701 91.88 2 2.4541E-72 113831 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 173.03 143.11 34373000 0 34373000 0 0 0 0 0 0 0 0 0 0 0 0 0 39009 619 34807 325306 257627 257627 1 NTPVYVSSPTWENHNAVFSAAGFK Unmodified 2622.2503 0.25030105 1049 P17174 GOT1 Aspartate aminotransferase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 86.584 82.947 3 2.8125E-24 103392 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.73 99.004 93309000 0 85817000 7492800 0 0 0 0 0 0 0 0 0 0 0 0 39010 1049 34808 325307;325308 257628;257629;257630 257628 3 NTPYQAPVRR Unmodified 1200.6364 0.63635412 1600 P49790 NUP153 Nuclear pore complex protein Nup153 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.6 21.806 3 0.0010368 22164 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 63.216 49.446 189940000 0 0 0 11419000 10703000 13884000 16291000 18556000 465310 19681000 15076000 32360000 17173000 10652000 23682000 39011 1600 34809 325309;325310;325311;325312;325313;325314;325315;325316;325317;325318;325319;325320 257631;257632;257633;257634;257635;257636;257637 257637 6 NTRETAQAIK Unmodified 1130.6044 0.60438529 1076 P18621 RPL17 60S ribosomal protein L17 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 11.02 7.8884 2 0.0030516 11024 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.01 44.529 569260000 343900000 117110000 108250000 0 0 0 0 0 0 0 0 0 0 0 0 39012 1076 34810 325321;325322;325323 257638;257639;257640;257641;257642 257639 4 NTRNEISEMNR Oxidation (M) 1378.6259 0.62592537 69;88 CON__P08729;CON__Q3KNV1;P08729 KRT7 Keratin, type II cytoskeletal 7 no no 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 8.1485 8.2846 3 0.0041013 6761 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.044 40.365 + 79627000 0 0 0 4225800 5882800 3997000 0 4178200 6121100 8047000 16703000 11718000 7686000 5573000 5495500 39013 69;88 34811 325324;325325;325326;325327;325328;325329;325330;325331;325332;325333;325334 257643;257644 257644 84 2 NTRNEISEMNR Unmodified 1362.631 0.63101075 69;88 CON__P08729;CON__Q3KNV1;P08729 KRT7 Keratin, type II cytoskeletal 7 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 19.622 19.769 3 0.0077425 20512 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 48.468 13.795 + 160700000 0 0 0 9677200 17880000 13769000 16204000 19271000 9370100 17930000 20807000 0 0 12087000 23703000 39014 69;88 34811 325335;325336;325337;325338;325339;325340;325341;325342;325343;325344 257645;257646;257647;257648;257649;257650 257650 5 NTSAAIQAYR Unmodified 1093.5516 0.55162144 4943 Q9UJX2 CDC23 Cell division cycle protein 23 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 30.178 30.507 2 0.0019071 33101 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 96.936 69.681 113000000 0 0 0 0 0 9913300 0 0 0 15983000 18869000 0 22893000 16300000 29038000 39015 4943 34812 325345;325346;325347;325348;325349;325350;325351;325352 257651;257652;257653;257654;257655;257656;257657;257658 257657 7 NTSDVISAAK Unmodified 1004.5138 0.51383895 1340 P35221 CTNNA1 Catenin alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25.346 24.65 2 0.0044926 24837 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 72.643 41.354 668650000 23397000 131880000 1094400 39622000 30014000 46872000 36792000 36227000 26518000 46334000 40220000 54635000 46698000 37886000 70455000 39016 1340 34813 325353;325354;325355;325356;325357;325358;325359;325360;325361;325362;325363;325364;325365;325366;325367 257659;257660;257661;257662;257663;257664;257665;257666;257667;257668;257669 257666 10 NTSEDSENFPSSSK Unmodified 1527.6325 0.63251011 3294 Q8IZE3 SCYL3 Protein-associating with the carboxyl-terminal domain of ezrin yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS 10 0 5 1 1 1 1 1 22.14 22.471 2 0.0020674 22666 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.247 27.865 16839000 0 0 0 0 0 0 0 3327600 0 4250000 0 0 3526900 1948200 3785700 39017 3294 34814 325368;325369;325370;325371;325372 257670;257671 257671 1 NTSFAYPAIR Unmodified 1138.5771 0.57710791 1652 P51398 DAP3 28S ribosomal protein S29, mitochondrial yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 61.669 61.898 2 0.0082115 69820 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 60.59 43.814 13795000 0 0 0 0 0 0 0 2542200 0 0 4245400 0 3389700 3617900 0 39018 1652 34815 325373;325374;325375;325376 257672;257673;257674 257673 3 NTSLPPLWSPEAER Unmodified 1595.7944 0.79437091 1600 P49790 NUP153 Nuclear pore complex protein Nup153 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.942 80 2 0.00015873 92850 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 85.288 73.557 173490000 0 0 0 5621400 7980200 10102000 10864000 13020000 10545000 19817000 14377000 22919000 14013000 13975000 30258000 39019 1600 34816 325377;325378;325379;325380;325381;325382;325383;325384;325385;325386;325387;325388 257675;257676;257677;257678;257679;257680;257681;257682;257683;257684;257685;257686;257687 257684 12 NTSPTTQPTASGAGAPVMTGAGESTNPENSELK Unmodified 3201.4732 0.47317929 3685 Q92908 GATA6 Transcription factor GATA-6 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 61.237 61.375 3 2.2956E-19 69581 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.969 40.485 29394000 0 0 0 0 3736300 0 4059000 0 0 4977100 10181000 0 0 0 6440400 39020 3685 34817 325389;325390;325391;325392;325393 257688;257689;257690;257691 257690 4 NTSPTTQPTASGAGAPVMTGAGESTNPENSELK Oxidation (M) 3217.4681 0.46809391 3685 Q92908 GATA6 Transcription factor GATA-6 yes yes 0 1 0 By MS/MS By matching By matching By MS/MS By matching 10 0 5 1 1 1 1 1 52.344 52.572 3 1.7166E-13 59748 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 40.328 37.834 26317000 0 0 0 0 0 0 4105300 0 0 7839600 5140000 0 5376400 3855700 0 39021 3685 34817 325394;325395;325396;325397;325398 257692 257692 5240 1 NTSQTAAITTK Unmodified 1134.5881 0.58806652 2888 Q6IN85 SMEK1 Serine/threonine-protein phosphatase 4 regulatory subunit 3A yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 15.473 15.643 2 0.00029757 15468 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 90.108 55.855 81487000 0 0 0 4393600 2523300 2942200 4584200 0 2639400 5794200 12101000 8814000 8777600 10162000 18755000 39022 2888 34818 325399;325400;325401;325402;325403;325404;325405;325406;325407;325408;325409 257693;257694;257695;257696;257697;257698;257699;257700;257701;257702 257702 10 NTSSETTMEEELGLVGATADDTEAELIRGICEMELLDGK Unmodified 4226.9393 0.93926469 2476 Q15021 NCAPD2 Condensin complex subunit 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 104.12 97.678 3 2.1464E-235 122986 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 178.34 176.77 44682000 39516000 5165900 0 0 0 0 0 0 0 0 0 0 0 0 0 39023 2476 34819 325410;325411 257703;257704 257704 2 NTSTVVSPSLLEK Unmodified 1373.7402 0.74021007 3022 Q6ZWJ1 STXBP4 Syntaxin-binding protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.526 64.615 2 0.0037433 73842 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 52.247 40.757 49675000 0 0 0 1767000 2717600 2755600 4464300 3001000 1904100 6508500 5167700 5523400 5103800 3365500 7396600 39024 3022 34820 325412;325413;325414;325415;325416;325417;325418;325419;325420;325421;325422;325423 257705;257706;257707;257708;257709;257710;257711;257712;257713;257714;257715;257716 257707 12 NTSVTNVPNMSQMQTSVGIVPTQAIATGPTADPEK 2 Oxidation (M) 3615.7396 0.73964108 3662 Q92793 CREBBP CREB-binding protein yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 77.863 78.043 3 7.0104E-21 90164 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 48.085 45.958 30958000 0 0 0 0 0 0 0 0 5704300 10103000 0 8823600 0 0 6327300 39025 3662 34821 325424;325425;325426;325427 257717;257718;257719 257717 5187;5188 3 NTTAAEEAR Unmodified 961.44649 0.44648767 149 O00410 IPO5 Importin-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 5.8944 5.9017 2 0.015207 3728 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 57.59 35.459 5502700 0 0 0 0 816530 3676100 0 1010100 0 0 0 0 0 0 0 39026 149 34822 325428;325429;325430;325431 257720;257721 257720 2 NTTDFVDEVR Unmodified 1194.5517 0.55168102 1975 P78345 RPP38 Ribonuclease P protein subunit p38 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 53.144 53.175 2 0.0014272 60038 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 91.867 73.642 69774000 0 0 0 3554500 4659300 0 4583400 7049900 0 0 0 19939000 19280000 10707000 0 39027 1975 34823 325432;325433;325434;325435;325436;325437;325438;325439 257722;257723;257724;257725;257726;257727 257724 6 NTTGSTIAEIRR Unmodified 1317.7001 0.70007659 5005 Q9ULU4 ZMYND8 Protein kinase C-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 31.575 31.72 3 0.039787 35007 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 25.647 13.588 76060000 0 0 0 2841700 7928900 12414000 6615100 4124500 2880100 11912000 0 9393600 7207400 0 10742000 39028 5005 34824 325440;325441;325442;325443;325444;325445;325446;325447;325448;325449 257728;257729 257729 2 NTTGVTEEALK Unmodified 1161.5877 0.58773217 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 31.669 31.858 2 0.00055755 33298 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 81.338 41.336 304800000 0 0 0 17012000 13259000 31052000 18858000 11882000 12654000 0 45531000 48417000 17718000 27757000 60659000 39029 2344 34825 325450;325451;325452;325453;325454;325455;325456;325457;325458;325459;325460 257730;257731;257732;257733;257734;257735 257734 5 NTTPMYR Unmodified 881.40654 0.40653711 234 O14976 GAK Cyclin-G-associated kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.407 18.601 2 0.044016 18348 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 66.993 49.226 59806000 0 0 0 3226000 3913000 4738200 3878100 5106000 3773900 5055100 5856500 6332100 6093100 4483300 7350800 39030 234 34826 325461;325462;325463;325464;325465;325466;325467;325468;325469;325470;325471;325472 257736 257736 1 NTTQNTGYSSGTQNANYPVR Unmodified 2171.9832 0.98318732 2215 Q12965 MYO1E Unconventional myosin-Ie yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 36.631 36.813 2;3 7.4593E-62 40220 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 172.1 159.48 179360000 0 0 0 8142400 8380800 12302000 11312000 11905000 7084400 15364000 17262000 26404000 14346000 12338000 34515000 39031 2215 34827 325473;325474;325475;325476;325477;325478;325479;325480;325481;325482;325483;325484;325485;325486;325487;325488;325489;325490;325491;325492;325493;325494;325495;325496 257737;257738;257739;257740;257741;257742;257743;257744;257745;257746;257747;257748;257749 257746 13 NTTWEDVGLWDPSLTK Unmodified 1860.8894 0.8893935 4371 Q9H2P0 ADNP Activity-dependent neuroprotector homeobox protein yes yes 0 0 0 By MS/MS 2 0 1 1 93.53 88.633 2 4.1338E-07 110038 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.17 83.705 39936000 0 39936000 0 0 0 0 0 0 0 0 0 0 0 0 0 39032 4371 34828 325497 257750;257751 257750 2 NTVANSPQTLLAGMNK Unmodified 1657.8458 0.84575455 1839 P61221 ABCE1 ATP-binding cassette sub-family E member 1 yes yes 0 0 0 By MS/MS By MS/MS 4.25 3.34 2 1 1 3 1 77.191 74.052 2;3 8.8785E-58 92261 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 173.19 153.95 224450000 0 213840000 0 0 0 0 0 0 0 0 0 0 0 0 10604000 39033 1839 34829 325498;325499;325500;325501 257752;257753;257754;257755 257752 4 NTVANSPQTLLAGMNK Oxidation (M) 1673.8407 0.84066917 1839 P61221 ABCE1 ATP-binding cassette sub-family E member 1 yes yes 0 1 0 By MS/MS 2 0 1 1 62.122 56.247 2 1.2463E-08 72251 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.745 59.048 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39034 1839 34829 325502 257756 257756 2987 1 NTVCPEQSEALAGGSAGDGAQAAGVTK Unmodified 2545.1715 0.17145838 3312 Q8N1G0 ZNF687 Zinc finger protein 687 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 52.97 52.874 3 1.0384E-30 59615 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 55.063 51.4 38156000 0 0 0 4730800 5167800 0 8550200 7618200 3681900 0 0 0 0 8406600 0 39035 3312 34830 325503;325504;325505;325506;325507;325508 257757;257758;257759;257760;257761;257762 257758 6 NTVCSLSSGK Unmodified 1051.4968 0.49680868 5085 Q9Y263 PLAA Phospholipase A-2-activating protein yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 20.891 16.694 2 0.039504 22086 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 55.235 38.992 74721000 8162400 66559000 0 0 0 0 0 0 0 0 0 0 0 0 0 39036 5085 34831 325509;325510 257763;257764 257763 2 NTVEKPELFLGLK Unmodified 1486.8395 0.83953018 392 O60293 ZFC3H1 Zinc finger C3H1 domain-containing protein yes yes 0 0 1 By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.796 76.891 3 0.0068909 88007 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 30.107 23.05 52875000 0 0 0 1076700 0 4155100 4025000 4324600 3883700 4888100 3039200 5214800 4301200 5839300 12128000 39037 392 34832 325511;325512;325513;325514;325515;325516;325517;325518;325519;325520;325521 257765;257766 257765 2 NTVELLVEDK Unmodified 1158.6132 0.61321864 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 63.307 62.852 2 0.0050412 71944 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 70.552 53.782 567050000 0 481590000 0 4602000 0 6141800 6265800 0 0 7786800 14246000 13483000 7053700 7230500 18647000 39038 487 34833 325522;325523;325524;325525;325526;325527;325528;325529;325530;325531 257767;257768;257769;257770;257771;257772;257773;257774;257775 257773 9 NTVETEREESK Unmodified 1320.6157 0.61573784 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 1 By MS/MS By matching By matching 10 0 3 1 1 1 6.1985 6.4283 3 0.046026 4096 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 32.254 28.271 10701000 0 0 0 0 0 0 0 0 3313500 0 0 0 2923100 0 4464600 39039 2446 34834 325532;325533;325534 257776 257776 1 NTVHRHEPPVTAEPIR Unmodified 1851.9704 0.97037821 3292 Q8IZ73 RPUSD2 RNA pseudouridylate synthase domain-containing protein 2 yes yes 0 0 1 By MS/MS 10 0 1 1 28.252 28.94 4 0.00072179 30252 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.499 37.131 17618000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17618000 39040 3292 34835 325535 257777 257777 1 NTVLATWQPYTTSK Unmodified 1608.8148 0.814772 4242 Q9BY44 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.7 3.52 2 1 7 1 2 1 1 1 1 1 1 1 75.134 73.603 2 6.774E-39 92154 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 199.82 199.82 326520000 121470000 154100000 0 0 0 8860900 3076000 3067600 0 7226200 0 0 6109600 7047200 15568000 39041 4242 34836 325536;325537;325538;325539;325540;325541;325542;325543;325544;325545 257778;257779;257780;257781;257782;257783;257784;257785;257786 257780 9 NTVQGFK Unmodified 792.413 0.41300269 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 16.415 16.653 2 0.032282 15109 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.039 40.568 113050000 0 0 0 0 1882400 3701000 0 0 2966900 4287100 16982000 16777000 3916600 16868000 45672000 39042 1337 34837 325546;325547;325548;325549;325550;325551;325552;325553;325554 257787 257787 1 NTVSQSISGDPEIDK Unmodified 1588.758 0.75804498 4242 Q9BY44 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 44.602 44.999 2 8.0555E-21 49403 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 139.89 99.17 26750000 0 0 0 0 0 7057000 0 0 0 0 0 0 0 0 19693000 39043 4242 34838 325555;325556 257788;257789 257789 2 NTVSQSISGDPEIDKK Unmodified 1716.853 0.853008 4242 Q9BY44 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.29 2.21 1 1 19 2 1 1 2 1 2 1 2 2 1 2 2 2 37.271 37.012 2;3 1.7493E-06 40511 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 107.09 92.409 240540000 0 63185000 0 8731100 5840400 18159000 10079000 9980100 5850700 15401000 20796000 4421700 15358000 19754000 42989000 39044 4242 34839 325557;325558;325559;325560;325561;325562;325563;325564;325565;325566;325567;325568;325569;325570;325571;325572;325573;325574;325575;325576;325577 257790;257791;257792;257793;257794;257795;257796;257797;257798;257799;257800;257801;257802 257801 13 NTVTIQQEK Unmodified 1059.556 0.55603812 2977 Q6UVJ0 SASS6 Spindle assembly abnormal protein 6 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 17.706 17.903 2 0.020004 17533 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 53.493 24.332 65812000 0 0 0 1843000 0 3998400 5464300 6692600 4908900 6927000 0 10336000 8493200 6793800 10355000 39045 2977 34840 325578;325579;325580;325581;325582;325583;325584;325585;325586;325587 257803;257804;257805 257805 3 NTVTLVQATPPQPIK Unmodified 1605.909 0.90900673 3755 Q96BD5 PHF21A PHD finger protein 21A yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 68.984 69.058 2 0.0043224 79203 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 61.48 43.146 11700000 0 0 0 0 2062900 0 2052600 2599300 0 2413600 0 2571400 0 0 0 39046 3755 34841 325588;325589;325590;325591;325592 257806 257806 0 NTVTQVLSR Unmodified 1016.5615 0.56145784 4812 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 44.364 44.424 2 0.020584 48420 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.645 46.264 9466300 0 0 0 0 0 0 9466300 0 0 0 0 0 0 0 0 39047 4812 34842 325593;325594 257807;257808 257808 2 NTVVATGGYGR Unmodified 1093.5516 0.55162144 1293 P31040 SDHA Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 27.502 27.965 2 0.0096745 29084 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.292 18.15 12546000 0 0 0 0 0 3129600 0 0 0 0 0 4017900 0 0 5398700 39048 1293 34843 325595;325596;325597 257809;257810 257809 2 NTWELKPEYR Unmodified 1334.6619 0.66190017 992 P13984 GTF2F2 General transcription factor IIF subunit 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 51.499 51.646 3 0.014267 57428 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 46.796 38.692 169760000 0 0 0 8220000 8302300 17500000 6772700 0 9973500 16985000 23042000 19104000 13105000 10360000 36393000 39049 992 34844 325598;325599;325600;325601;325602;325603;325604;325605;325606;325607;325608 257811;257812;257813 257813 3 NTYQSAMGK Unmodified 998.44913 0.4491302 1291 P30876 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 15.555 15.726 2 0.009898 14342 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 65.404 53.635 40919000 0 0 0 0 2481500 2061500 2227600 2480400 2521400 4727300 6065200 6259400 5215200 6879200 0 39050 1291 34845 325609;325610;325611;325612;325613;325614;325615;325616;325617;325618 257814 257814 1 NVAALQERYGK Unmodified 1247.6622 0.66223452 2689 Q4V328 GRIPAP1 GRIP1-associated protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 38.12 33.117 3 0.0016541 46008 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.488 62.078 55633000 52550000 0 3082700 0 0 0 0 0 0 0 0 0 0 0 0 39051 2689 34846 325619;325620 257815;257816 257816 2 NVAAVQPMK Unmodified 956.51134 0.51133653 410 O60524 NEMF Nuclear export mediator factor NEMF yes yes 0 0 0 By MS/MS 2 0 1 1 33.345 28.701 2 0.033612 37510 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.567 42.796 43065000 0 43065000 0 0 0 0 0 0 0 0 0 0 0 0 0 39052 410 34847 325621 257817 257817 1 NVADDYIHTAACLHSLALEEPTVIK Unmodified 2779.3851 0.38507997 5254 Q9Y5X3 SNX5 Sorting nexin-5 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 93.009 88.952 4 0.00044473 105906 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 40.142 33.914 24685000 0 24685000 0 0 0 0 0 0 0 0 0 0 0 0 0 39053 5254 34848 325622;325623 257818;257819;257820 257820 3 NVAEALGHSPK Unmodified 1121.5829 0.58292157 3213 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27.838 27.059 2 4.2584E-09 37641 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.46 100.17 1042800000 154550000 63190000 55544000 48499000 43860000 65494000 62241000 64683000 55482000 72323000 79387000 84969000 74890000 57033000 60683000 39054 3213 34849 325624;325625;325626;325627;325628;325629;325630;325631;325632;325633;325634;325635;325636;325637;325638 257821;257822;257823;257824;257825;257826;257827;257828;257829;257830;257831;257832;257833;257834;257835;257836;257837;257838 257824 18 NVAELPTK Unmodified 870.48108 0.48108226 584 O94782 USP1 Ubiquitin carboxyl-terminal hydrolase 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 30.907 31.209 2 0.035078 33990 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 52.716 37.934 25803000 0 0 0 0 0 6899500 0 4226100 0 0 0 9197700 5479400 0 0 39055 584 34850 325639;325640;325641;325642 257839 257839 1 NVAGAEAPPPQK Unmodified 1177.6091 0.60913632 4849 Q9UBP6 METTL1 tRNA (guanine-N(7)-)-methyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 18.559 18.779 2 0.0013081 17821 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.974 55.819 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39056 4849 34851 325643;325644;325645;325646;325647;325648;325649;325650 257840;257841;257842;257843;257844;257845;257846;257847 257842 8 NVAIFTAGQESPIILR Unmodified 1727.957 0.95701956 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 86.714 86.854 2 3.094E-19 100477 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 106.01 92.345 91939000 0 0 0 0 0 8445000 5090200 6930300 7908900 14548000 9577900 10025000 5882900 7086400 16445000 39057 619 34852 325651;325652;325653;325654;325655;325656;325657;325658;325659;325660;325661;325662 257848;257849;257850;257851;257852;257853;257854;257855;257856;257857;257858;257859;257860 257850 13 NVALLSQLYHSPAR Unmodified 1567.8471 0.84707518 2566 Q15717 ELAVL1 ELAV-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 76.147 76.295 3 0.0080366 87536 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.843 45.564 36616000 0 0 0 0 0 4601100 0 4164600 2853000 4687000 4471100 0 2161400 0 13678000 39058 2566 34853 325663;325664;325665;325666;325667;325668;325669 257861;257862 257862 1 NVALVSGDTENAK Unmodified 1316.6572 0.65720872 2617 Q16610 ECM1 Extracellular matrix protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 34.663 34.797 2 6.8269E-08 37040 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 118.4 95.663 237010000 0 0 0 82478000 8817600 15849000 12357000 33697000 6621400 15815000 17090000 20778000 16242000 7260000 0 39059 2617 34854 325670;325671;325672;325673;325674;325675;325676;325677;325678;325679;325680 257863;257864;257865;257866;257867;257868;257869;257870;257871;257872 257869 9 NVASEGEGQILEPIGTESK Unmodified 1956.964 0.96401501 4900 Q9UHF7 TRPS1 Zinc finger transcription factor Trps1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 2 1 1 1 67.047 67.138 2 0.00012309 77123 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 72.937 67.953 30887000 0 0 0 1583800 1540400 0 1869400 2087400 1669900 4455100 2808700 4222800 2587500 2202300 5859900 39060 4900 34855 325681;325682;325683;325684;325685;325686;325687;325688;325689;325690;325691;325692 257873;257874;257875;257876;257877;257878;257879 257873 7 NVASGGGGVGDGVQEPTTGNWR Unmodified 2113.9777 0.97770801 154 O00429 DNM1L Dynamin-1-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 1 2 2 2 56.166 56.272 2;3 1.264E-190 63242 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 249.69 239.64 339340000 0 0 0 19341000 14569000 43347000 24496000 21467000 14760000 40820000 35355000 22694000 26171000 27633000 48693000 39061 154 34856 325693;325694;325695;325696;325697;325698;325699;325700;325701;325702;325703;325704;325705;325706;325707;325708;325709;325710;325711;325712;325713;325714;325715 257880;257881;257882;257883;257884;257885;257886;257887;257888;257889;257890;257891;257892;257893 257882 13 NVASGGGGVGDGVQEPTTGNWRGMLK Unmodified 2543.2187 0.21868334 154 O00429 DNM1L Dynamin-1-like protein yes yes 0 0 1 By MS/MS 2 0 1 1 78.245 70.114 3 1.0651E-37 92233 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 113.67 105.87 20754000 20754000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39062 154 34857 325716 257894 257894 1 NVASGGGGVGDGVQEPTTGNWRGMLK Oxidation (M) 2559.2136 0.21359796 154 O00429 DNM1L Dynamin-1-like protein yes yes 0 1 1 By MS/MS 2 0 1 1 67.719 59.425 3 5.9839E-06 79624 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.498 44.272 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39063 154 34857 325717 257895 257895 218 1 NVATEGTSTQK Unmodified 1134.5517 0.55168102 4302 Q9GZR7 DDX24 ATP-dependent RNA helicase DDX24 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 7.066 7.2089 2 0.00030791 4669 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.692 78.152 28422000 0 0 0 0 1788100 2063100 2764300 0 3251700 0 5358500 0 5095600 2978800 5121500 39064 4302 34858 325718;325719;325720;325721;325722;325723;325724;325725 257896;257897;257898;257899;257900;257901;257902 257898 7 NVAVDELSR Unmodified 1001.5142 0.5141733 1032 P16083 NQO2 Ribosyldihydronicotinamide dehydrogenase [quinone] yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 38.976 39.297 2 0.004955 43107 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 85.161 59.762 99101000 0 0 0 5736900 0 0 0 0 0 0 0 41172000 0 22441000 29751000 39065 1032 34859 325726;325727;325728;325729 257903;257904;257905;257906 257905 4 NVCEQGTSTVDQNFGK Unmodified 1782.7843 0.7842765 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 41.342 41.599 2 2.6763E-27 46407 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 155.02 148.91 51590000 0 0 0 2773100 0 3325000 0 1888100 3350600 4027200 5764100 6848100 7583700 6094200 9936000 39066 2203 34860 325730;325731;325732;325733;325734;325735;325736;325737;325738;325739 257907;257908;257909;257910;257911;257912;257913;257914 257913 8 NVCLPPEMEVALTEDQVPALK Unmodified 2352.1705 0.17051909 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.67 3.89 4 1 4 3 2 1 1 1 1 94.767 92.864 2;3 1.4369E-86 114224 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.69 120.05 1030800000 0 1015300000 4583500 0 0 0 0 688690 0 3078400 1870600 0 0 0 5333000 39067 1226 34861 325740;325741;325742;325743;325744;325745;325746;325747;325748 257915;257916;257917;257918;257919;257920;257921;257922;257923;257924 257916 9 NVCLPPEMEVALTEDQVPALK Oxidation (M) 2368.1654 0.16543371 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 5.4 3.77 2 1 2 3 1 1 86.782 84.269 2;3 4.1607E-15 104051 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.11 94.972 118730000 0 108770000 0 0 0 0 0 0 0 0 3971000 5984400 0 0 0 39068 1226 34861 325749;325750;325751;325752;325753 257925;257926;257927;257928 257926 1813 4 NVCTEAGMFAIR Oxidation (M) 1383.6275 0.62750527 1898 P62333 PSMC6 26S protease regulatory subunit 10B yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.707 61.806 2 1.8126E-05 70311 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 96.143 75.623 304560000 0 0 0 16894000 19721000 36495000 8437300 7162900 7686800 48626000 46273000 68949000 9833300 13894000 20585000 39069 1898 34862 325754;325755;325756;325757;325758;325759;325760;325761;325762;325763;325764;325765 257929;257930;257931;257932;257933;257934;257935;257936;257937;257938;257939;257940;257941;257942;257943 257941 3075 15 NVCTEAGMFAIR Unmodified 1367.6326 0.63259065 1898 P62333 PSMC6 26S protease regulatory subunit 10B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 72.92 73.13 2 0.016525 84182 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 57.55 40.037 83323000 0 0 0 0 0 0 0 0 0 25328000 27511000 30484000 0 0 0 39070 1898 34862 325766;325767;325768 257944;257945;257946 257944 3 NVDAILEEYANCK Unmodified 1537.7083 0.70825802 2472 Q15014 MORF4L2 Mortality factor 4-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 3 1 1 1 1 1 1 1 1 1 1 81.012 79.906 2;3 4.1534E-10 99027 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 151.07 132.26 155230000 0 129170000 2245800 0 1024000 2131700 1053400 2018400 2041800 3444000 0 3049500 0 2217200 6836000 39071 2472 34863 325769;325770;325771;325772;325773;325774;325775;325776;325777;325778;325779;325780;325781 257947;257948;257949;257950;257951;257952;257953;257954;257955 257949 8 NVDEAINFINER Unmodified 1432.6947 0.69465686 1665 P51648 ALDH3A2 Fatty aldehyde dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 76.126 76.153 2 2.199E-05 88248 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 103.22 74.494 24421000 0 0 0 4500900 0 3248600 0 3605000 3041600 3919100 0 6106200 0 0 0 39072 1665 34864 325782;325783;325784;325785;325786;325787 257956;257957;257958;257959 257959 4 NVDFNYATK Unmodified 1070.5033 0.50327426 3576 Q8WWM7 ATXN2L Ataxin-2-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.422 43.597 2 0.013352 48147 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 59.931 53.481 178180000 0 0 0 7997700 9557600 10593000 12266000 15336000 11981000 17503000 13015000 28179000 11302000 13258000 27193000 39073 3576 34865 325788;325789;325790;325791;325792;325793;325794;325795;325796;325797;325798;325799 257960;257961;257962;257963;257964;257965;257966 257965 7 NVDGVNYASITR Unmodified 1307.647 0.64697839 4853 Q9UBR2 CTSZ Cathepsin Z yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 53.097 52.98 2 1.0159E-05 60510 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 108.67 100.2 32048000 0 0 0 3388200 4688600 8268500 5498700 4280100 5924300 0 0 0 0 0 0 39074 4853 34866 325800;325801;325802;325803;325804;325805;325806;325807;325808 257967;257968;257969;257970;257971;257972;257973;257974;257975 257975 9 NVDILKDPETVK Unmodified 1369.7453 0.74529545 237 O14980 XPO1 Exportin-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.89 3.41 3 2 13 1 3 1 1 1 2 2 2 2 1 2 54.243 52.981 2;3 0.00019228 66753 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 119.45 98.477 450490000 30117000 194490000 10148000 0 0 0 4110300 2833300 0 41106000 40204000 38845000 31049000 5926600 51660000 39075 237 34867 325809;325810;325811;325812;325813;325814;325815;325816;325817;325818;325819;325820;325821;325822;325823;325824;325825;325826 257976;257977;257978;257979;257980;257981;257982;257983;257984;257985;257986 257981 4 NVDLAIQQGK Unmodified 1084.5877 0.58767259 5186 Q9Y485 DMXL1 DmX-like protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 45.432 40.11 2 0.0078129 52061 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.474 59.477 28804000 0 28804000 0 0 0 0 0 0 0 0 0 0 0 0 0 39076 5186 34868 325827 257987 257987 1 NVDLASPEEHQK Unmodified 1365.6525 0.6524577 3325 Q8N3R9 MPP5 MAGUK p55 subfamily member 5 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 30.035 25.64 3 0.032605 33519 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 34.898 19.526 20465000 0 20465000 0 0 0 0 0 0 0 0 0 0 0 0 0 39077 3325 34869 325828;325829 257988 257988 1 NVDLLSDMVQEHDEPILK Oxidation (M) 2110.0252 0.025235058 1761 P55209 NAP1L1 Nucleosome assembly protein 1-like 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.62 3.61 7 2 4 3 5 1 1 1 1 1 78.671 76.229 3 5.4349E-54 91507 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 145.62 133.77 1681600000 377120000 933050000 161980000 0 18278000 0 0 0 0 66195000 69399000 55533000 0 0 0 39078 1761 34870 325830;325831;325832;325833;325834;325835;325836;325837;325838;325839;325840;325841;325842 257989;257990;257991;257992;257993;257994;257995;257996;257997;257998;257999;258000;258001;258002;258003;258004;258005 257996 2877 15 NVDLLSDMVQEHDEPILK Unmodified 2094.0303 0.030320436 1761 P55209 NAP1L1 Nucleosome assembly protein 1-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.62 3.66 1 7 3 5 3 7 1 1 1 1 1 1 92.232 89.812 2;3 4.2178E-71 104808 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 168.32 153.86 5179700000 1846100000 3203900000 86800000 0 0 0 0 0 0 2850300 3579100 4546200 0 2620100 29374000 39079 1761 34870 325843;325844;325845;325846;325847;325848;325849;325850;325851;325852;325853;325854;325855;325856;325857;325858 258006;258007;258008;258009;258010;258011;258012;258013;258014;258015;258016;258017;258018;258019;258020;258021;258022;258023;258024 258023 18 NVDLSGRQER Unmodified 1172.5898 0.58979786 448 O60934 NBN Nibrin yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.046 15.217 3 0.0042671 14942 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 56.359 43.783 142160000 0 0 0 6102200 6975100 6601600 8774600 8422500 5993600 12555000 18492000 16041000 20576000 15126000 16499000 39080 448 34871 325859;325860;325861;325862;325863;325864;325865;325866;325867;325868;325869;325870 258025;258026;258027;258028;258029;258030;258031 258026 7 NVDLSTFYQNR Unmodified 1355.647 0.64697839 590 O94826 TOMM70A Mitochondrial import receptor subunit TOM70 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 71.494 71.555 2 0.0035122 81793 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.067 60.904 40797000 0 0 0 3822100 1966300 4545000 2928200 0 2288000 2954300 4697100 4657600 2744500 3303000 6891100 39081 590 34872 325871;325872;325873;325874;325875;325876;325877;325878;325879;325880;325881 258032;258033;258034;258035;258036 258033 5 NVDQAIK Unmodified 786.42357 0.42356738 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 14.939 11.226 2 0.033071 15059 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.086 27.105 60952000 6246500 54705000 0 0 0 0 0 0 0 0 0 0 0 0 0 39082 5049 34873 325882;325883 258037 258037 1 NVDRSSAQHLEVTVGDLTVIITDFK Unmodified 2756.4345 0.434473 3275 Q8IY57 YAF2 YY1-associated factor 2 yes yes 0 0 1 By MS/MS 2 0 1 1 99.605 91.474 4 8.4408E-05 117949 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.238 51.077 9429400 9429400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39083 3275 34874 325884 258038 258038 1 NVDSDRLGMGFGNCR Unmodified 1696.741 0.7409719 4534 Q9NP61 ARFGAP3 ADP-ribosylation factor GTPase-activating protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.559 52.702 3 0.0014289 59626 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 48.823 44.878 81976000 0 0 0 3165700 2665100 7699600 3046800 3858100 4529600 7433700 10191000 9186400 6660100 6154800 17384000 39084 4534 34875 325885;325886;325887;325888;325889;325890;325891;325892;325893;325894;325895;325896 258039;258040;258041;258042;258043 258040 3 NVDSILEDYANYK Unmodified 1542.7202 0.72020291 4860 Q9UBU8 MORF4L1 Mortality factor 4-like protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS 4.67 3.77 2 1 1 1 1 83.872 81.538 2 1.2949E-17 101121 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 152.07 130.08 97011000 0 88340000 1612000 0 0 0 0 0 0 0 0 0 0 0 7058800 39085 4860 34876 325897;325898;325899 258044;258045;258046 258045 3 NVDVNVK Unmodified 786.42357 0.42356738 4103 Q9BR61 ACBD6 Acyl-CoA-binding domain-containing protein 6 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 23.18 19.186 2 0.031783 25344 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.029 25.314 44114000 0 44114000 0 0 0 0 0 0 0 0 0 0 0 0 0 39086 4103 34877 325900;325901 258047 258047 1 NVDWDMMEQK Unmodified 1294.5322 0.5322079 1443 P41743 PRKCI Protein kinase C iota type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 65.868 66.022 2 0.0025698 74891 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.287 75.008 42228000 0 0 0 0 2095400 3391700 1861400 2140400 1789100 4225900 4546700 6379400 2526700 4541000 8730600 39087 1443 34878 325902;325903;325904;325905;325906;325907;325908;325909;325910;325911;325912 258048;258049;258050;258051;258052;258053;258054;258055 258050 8 NVEAIGLLGGQK Unmodified 1197.6717 0.67173657 584 O94782 USP1 Ubiquitin carboxyl-terminal hydrolase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 69.027 69.077 2 0.018644 79156 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 51.268 36.117 39559000 0 0 0 3342600 2649700 0 3784700 2964000 2236000 5305300 6186300 6457000 3817000 2817000 0 39088 584 34879 325913;325914;325915;325916;325917;325918;325919;325920;325921;325922 258056;258057;258058;258059;258060 258060 3 NVEDFTGPR Unmodified 1033.4829 0.48287317 1825 P61009 SPCS3 Signal peptidase complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 37.081 37.211 2 0.00355 40804 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 89.698 38.732 97601000 0 0 0 11051000 8507500 7180000 6732700 8879500 5863900 8540300 8968800 14553000 9561300 7762700 0 39089 1825 34880 325923;325924;325925;325926;325927;325928;325929;325930;325931;325932;325933 258061;258062;258063;258064;258065;258066;258067 258064 7 NVELVEGEEGR Unmodified 1229.5888 0.58879481 1702 P52789 HK2 Hexokinase-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 38.047 38.217 2 0.00033061 42156 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 96.143 79.81 75075000 0 0 0 5027900 3277700 5423500 6373500 4573600 3945400 5139000 8481800 10840000 6941100 0 15052000 39090 1702 34881 325934;325935;325936;325937;325938;325939;325940;325941;325942;325943;325944 258068;258069;258070;258071;258072;258073;258074;258075;258076 258074 9 NVEMFMTIEK 2 Oxidation (M) 1272.573 0.57301009 3475 Q8TAQ2 SMARCC2 SWI/SNF complex subunit SMARCC2 yes yes 0 2 0 By MS/MS 10 0 1 1 47.028 47.469 2 0.03602 53291 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 46.39 33.802 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39091 3475 34882 325945 258077 258077 1 NVEQNNLSDLIK Unmodified 1385.7151 0.71505795 3178 Q86W50 METTL16 Methyltransferase-like protein 16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 70.139 69.578 2 2.4923E-05 79862 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 93.111 81.959 352190000 0 290010000 0 0 2698700 6840200 4261100 3072100 3311400 5937300 7330300 7583700 5005500 5762600 10379000 39092 3178 34883 325946;325947;325948;325949;325950;325951;325952;325953;325954;325955;325956;325957;325958 258078;258079;258080;258081;258082;258083;258084;258085;258086;258087;258088;258089;258090 258078 13 NVEQSSDLQDQLNHLLK Unmodified 1979.9912 0.99123281 3751 Q96B45 C10orf32 UPF0693 protein C10orf32 yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 85.318 81.71 3 1.0686E-46 101566 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.56 114.01 53832000 0 53255000 576770 0 0 0 0 0 0 0 0 0 0 0 0 39093 3751 34884 325959;325960 258091 258091 1 NVESFASMLRHSPLTQMGPAK Unmodified 2300.1406 0.14055636 5113 Q9Y2Q9 MRPS28 28S ribosomal protein S28, mitochondrial yes yes 0 0 1 By MS/MS 2 0 1 1 46.877 39.398 3 0.017189 54700 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 20.075 0 29561000 29561000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39094 5113 34885 325961 258092 258092 1 NVESIAEQMENPDLK Unmodified 1715.8036 0.80361496 3808 Q96EB6 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 75.168 75.276 2 5.1188E-07 85969 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 107.85 95.27 8934200 0 0 0 0 0 0 0 0 0 2506400 0 0 3100500 3327400 0 39095 3808 34886 325962;325963;325964 258093;258094 258094 2 NVESTNSNAYTQR Unmodified 1482.6699 0.66989867 3161 Q86V48 LUZP1 Leucine zipper protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 18.95 19.541 2 0.0024987 19073 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.37 49.366 2553900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2553900 39096 3161 34887 325965 258095 258095 1 NVETHTGSLIEQLTTEK Unmodified 1898.9585 0.9585357 2221 Q12986 NFX1 Transcriptional repressor NF-X1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 78.412 75.784 3 0.014265 94649 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 54.073 44.819 5085800 0 0 5085800 0 0 0 0 0 0 0 0 0 0 0 0 39097 2221 34888 325966;325967 258096;258097 258096 2 NVEVIELAK Unmodified 1013.5757 0.57571092 128 O00203 AP3B1 AP-3 complex subunit beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.307 61.409 2 0.0038222 70296 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 88.819 45.95 465490000 0 0 0 25479000 24657000 36474000 34256000 26523000 31512000 48469000 44032000 56198000 45817000 41876000 50200000 39098 128 34889 325968;325969;325970;325971;325972;325973;325974;325975;325976;325977;325978;325979 258098;258099;258100;258101;258102;258103;258104;258105;258106;258107 258098 10 NVEVTMSVHDEEGK Oxidation (M) 1588.7039 0.70390092 4433 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 28.501 24.185 2 0.0012446 32056 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.805 76.035 7404700 0 7404700 0 0 0 0 0 0 0 0 0 0 0 0 0 39099 4433 34890 325980;325981 258108 258108 5882 1 NVFDEAILAALEPPEPK Unmodified 1851.9618 0.96183016 1821 P60953 CDC42 Cell division control protein 42 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.9 3.81 3 1 6 1 2 1 2 2 2 98.361 96.592 2;3 1.1358E-09 118283 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.44 99.143 266400000 68728000 171150000 8168900 0 0 0 0 0 0 6949100 4182400 0 0 0 7225000 39100 1821 34891 325982;325983;325984;325985;325986;325987;325988;325989;325990;325991 258109;258110;258111;258112;258113;258114;258115;258116;258117;258118 258116 10 NVFDEAILAALEPPEPKK Unmodified 1980.0568 0.056793183 1821 P60953 CDC42 Cell division control protein 42 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.29 0.452 5 2 3 3 1 98.353 93.355 2;3 2.5082E-63 116775 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 164.65 155.44 237780000 144980000 88158000 4646100 0 0 0 0 0 0 0 0 0 0 0 0 39101 1821 34892 325992;325993;325994;325995;325996;325997;325998 258119;258120;258121;258122;258123;258124;258125;258126 258124 7 NVFDFLNEK Unmodified 1124.5502 0.55022446 3342 Q8N5A5 ZGPAT Zinc finger CCCH-type with G patch domain-containing protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 84.02 84.137 2 0.04445 97608 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 43.442 22.817 12560000 0 0 0 0 0 4582500 0 3348700 0 0 0 2358500 0 2270000 0 39102 3342 34893 325999;326000;326001;326002 258127 258127 1 NVFEETSVK Unmodified 1051.5186 0.51858998 1457 P42566 EPS15 Epidermal growth factor receptor substrate 15 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 44.168 39.647 2 0.025718 51591 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.256 51.48 65479000 0 63442000 2036300 0 0 0 0 0 0 0 0 0 0 0 0 39103 1457 34894 326003;326004 258128;258129 258128 2 NVFIAQNVASLQELGGSEK Unmodified 2003.0324 0.032369346 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.87 3.88 6 2 7 2 4 2 1 2 1 1 2 86.311 83.704 2;3 1.4327E-67 105312 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 192.39 181.14 210370000 19075000 141370000 9289400 0 0 5486400 0 0 0 14273000 3749000 0 0 0 17119000 39104 2775 34895 326005;326006;326007;326008;326009;326010;326011;326012;326013;326014;326015;326016;326017;326018;326019 258130;258131;258132;258133;258134;258135;258136;258137;258138;258139;258140;258141 258138 11 NVFLLGFIPAK Unmodified 1217.7172 0.7172302 3683 Q92900 UPF1 Regulator of nonsense transcripts 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 94.946 95.078 2 0.0030628 110374 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.474 58.954 17390000 0 0 0 0 0 1942900 927540 1393500 986430 2107300 922940 1503800 701240 1326200 5577800 39105 3683 34896 326020;326021;326022;326023;326024;326025;326026;326027;326028;326029 258142;258143;258144;258145 258144 4 NVFPDNWK Unmodified 1018.4872 0.48723027 2250 Q13188 STK3 Serine/threonine-protein kinase 3;Serine/threonine-protein kinase 3 36kDa subunit;Serine/threonine-protein kinase 3 20kDa subunit yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 63.167 63.322 2 0.042907 71488 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.442 14.241 24914000 0 0 0 0 2257400 0 0 0 0 0 4426500 0 5460900 3691900 9077100 39106 2250 34897 326030;326031;326032;326033;326034 258146 258146 1 NVFSSSGTSFSGRK Unmodified 1459.7056 0.7055559 1600 P49790 NUP153 Nuclear pore complex protein Nup153 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 39.409 39.588 2;3 3.6804E-17 44002 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 110.51 98.927 517720000 0 0 0 24773000 20427000 36088000 43375000 32017000 41035000 45476000 48852000 61200000 50072000 40359000 74044000 39107 1600 34898 326035;326036;326037;326038;326039;326040;326041;326042;326043;326044;326045;326046;326047;326048;326049;326050;326051;326052;326053;326054;326055;326056;326057;326058 258147;258148;258149;258150;258151;258152;258153;258154;258155;258156;258157;258158;258159 258152 13 NVGESVAAALSPLGIEVDIDVEHGGK Unmodified 2575.313 0.31296088 2303 Q13501 SQSTM1 Sequestosome-1 yes yes 0 0 0 By MS/MS 3 0 1 1 97.1 93.588 3 0.016026 96703 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 21.566 18.989 4749400 4749400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39108 2303 34899 326059 258160 258160 1 NVGFESDTGGAFK Unmodified 1327.6044 0.60444487 4978 Q9UKX7 NUP50 Nuclear pore complex protein Nup50 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.949 53.092 2 1.7346E-15 59154 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 145.34 133.85 674420000 0 0 0 30767000 32764000 61205000 43440000 34359000 48608000 71062000 63049000 65117000 70295000 58358000 95396000 39109 4978 34900 326060;326061;326062;326063;326064;326065;326066;326067;326068;326069;326070;326071 258161;258162;258163;258164;258165;258166;258167;258168;258169;258170;258171;258172 258170 12 NVGLDIEAEVPAVK Unmodified 1452.7824 0.78240924 1641 P50990 CCT8 T-complex protein 1 subunit theta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 5.84 4.01 1 11 1 12 3 8 2 1 1 1 1 1 1 1 1 1 1 1 1 86.461 85.011 2 2.7875E-29 95861 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 134.98 130.02 18378000000 462560000 17490000000 137900000 3491900 8625400 14970000 11453000 7936200 15576000 46504000 37147000 27054000 10734000 34316000 69473000 39110 1641 34901 326072;326073;326074;326075;326076;326077;326078;326079;326080;326081;326082;326083;326084;326085;326086;326087;326088;326089;326090;326091;326092;326093;326094;326095;326096 258173;258174;258175;258176;258177;258178;258179;258180;258181;258182;258183;258184;258185;258186;258187;258188;258189;258190;258191;258192;258193;258194;258195;258196;258197;258198 258184 20 NVGQFSGFPFEK Unmodified 1355.651 0.65100113 1365 P35659 DEK Protein DEK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 81.86 80.593 2 4.1303E-13 101988 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 145.89 131.22 3098300000 743290000 787510000 110300000 61510000 93613000 127360000 99336000 103240000 98962000 151870000 145700000 168020000 95081000 112280000 200210000 39111 1365 34902 326097;326098;326099;326100;326101;326102;326103;326104;326105;326106;326107;326108;326109;326110;326111;326112;326113 258199;258200;258201;258202;258203;258204;258205;258206;258207;258208;258209;258210;258211;258212;258213 258205 14 NVGTGLVGAPACGDVMK Unmodified 1644.7964 0.79636152 4352 Q9H1K1 ISCU Iron-sulfur cluster assembly enzyme ISCU, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 70.771 64.954 2 6.8609E-09 82564 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 135.91 107.18 46300000 0 46300000 0 0 0 0 0 0 0 0 0 0 0 0 0 39112 4352 34903 326114 258214 258214 1 NVGTGLVGAPACGDVMK Oxidation (M) 1660.7913 0.79127614 4352 Q9H1K1 ISCU Iron-sulfur cluster assembly enzyme ISCU, mitochondrial yes yes 0 1 0 By MS/MS 2 0 1 1 57.538 51.707 2 6.4028E-08 66734 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.36 58.666 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39113 4352 34903 326115 258215 258215 5816 1 NVGVSFYADKPEVTQEQK Unmodified 2038.0007 0.0007348666 92 CON__Q3SZR3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 59.255 59.028 3 0.0019929 67754 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 39.849 36.244 + 14820000 0 0 0 3513200 5078500 0 3350000 2878200 0 0 0 0 0 0 0 39114 92 34904 326116;326117;326118;326119 258216;258217 258217 2 NVHDLLAK Unmodified 908.50797 0.50796571 3701;164 O00507;Q93008 USP9Y;USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-Y;Probable ubiquitin carboxyl-terminal hydrolase FAF-X no no 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 38.812 33.398 2 0.0071569 41328 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 130.56 97.204 168820000 11134000 54803000 102880000 0 0 0 0 0 0 0 0 0 0 0 0 39115 164;3701 34905 326120;326121;326122;326123 258218;258219 258219 1 NVHGINFVSPVR Unmodified 1337.7204 0.7204181 1722 P53634 CTSC Dipeptidyl peptidase 1;Dipeptidyl peptidase 1 exclusion domain chain;Dipeptidyl peptidase 1 heavy chain;Dipeptidyl peptidase 1 light chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 62.25 62.337 3 0.0065196 71191 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 42.862 42.862 128490000 0 0 0 29192000 6822400 8774200 6736400 18384000 0 0 10214000 15987000 7486800 9815100 15076000 39116 1722 34906 326124;326125;326126;326127;326128;326129;326130;326131;326132;326133 258220;258221;258222;258223 258221 2 NVHLFITGEK Unmodified 1156.6241 0.6240581 2853 Q68CQ4 DIEXF Digestive organ expansion factor homolog yes yes 0 0 0 By MS/MS 2 0 1 1 67.303 59.008 3 0.033797 78946 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 41.399 30.235 20444000 20444000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39117 2853 34907 326134 258224 258224 1 NVIAVLEEFMK Unmodified 1291.6846 0.68460945 4488 Q9HAS0 C17orf75 Protein Njmu-R1 yes yes 0 0 0 By MS/MS 2 0 1 1 103.38 98.646 2 0.026354 121881 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.303 43.527 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39118 4488 34908 326135 258225 258225 1 NVIDGDLCEQFNSMEPNK Oxidation (M) 2124.9092 0.90921902 2528 Q15393 SF3B3 Splicing factor 3B subunit 3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.38 4 2 17 1 4 1 2 1 1 1 1 1 1 2 2 2 1 2 71.03 69.817 2;3 2.673E-164 86624 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 236.42 221.32 848950000 6829900 548360000 2930300 8067600 14564000 16320000 12321000 13336000 11974000 21904000 26523000 66870000 33757000 21184000 44009000 39119 2528 34909 326136;326137;326138;326139;326140;326141;326142;326143;326144;326145;326146;326147;326148;326149;326150;326151;326152;326153;326154;326155;326156;326157;326158 258226;258227;258228;258229;258230;258231;258232;258233;258234;258235;258236;258237;258238;258239;258240;258241;258242 258228 4164 16 NVIDGDLCEQFNSMEPNK Unmodified 2108.9143 0.9143044 2528 Q15393 SF3B3 Splicing factor 3B subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.74 3.84 6 2 11 2 5 1 1 1 1 1 1 1 1 1 1 1 1 79.474 77.791 2;3 1.7921E-73 95710 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 218.16 213.27 1317500000 18602000 1134200000 2855100 0 6804100 12556000 3469100 13492000 7912800 17589000 14444000 16604000 7215100 16142000 45617000 39120 2528 34909 326159;326160;326161;326162;326163;326164;326165;326166;326167;326168;326169;326170;326171;326172;326173;326174;326175;326176;326177 258243;258244;258245;258246;258247;258248;258249;258250;258251;258252;258253 258246 8 NVIFEDEEK Unmodified 1121.5241 0.52406928 4950 Q9UJY5 GGA1 ADP-ribosylation factor-binding protein GGA1 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.5 3.55 1 1 4 1 1 1 1 1 1 46.072 43.77 2 0.005264 50159 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 78.516 61.276 174370000 206470 129630000 0 8192100 0 20189000 16144000 0 0 0 0 0 0 0 0 39121 4950 34910 326178;326179;326180;326181;326182;326183 258254;258255;258256;258257 258257 4 NVIFEISPTEEVGDFEVK Unmodified 2051.0099 0.0099025694 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.57 3.85 3 1 3 1 2 1 1 1 1 93.068 90.833 2;3 2.1729E-05 112331 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.979 63.705 99467000 2587900 83594000 7043700 1072200 0 0 0 0 0 3134800 2034700 0 0 0 0 39122 1518 34911 326184;326185;326186;326187;326188;326189;326190 258258;258259;258260;258261;258262;258263;258264;258265 258259 8 NVIFQPVAELK Unmodified 1256.7129 0.71287311 2064 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.372 79.432 2 0.00028233 91805 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 95.523 84.372 389650000 0 0 0 19016000 24639000 30154000 26646000 22471000 20482000 53118000 30938000 67972000 31304000 25412000 37494000 39123 2064 34912 326191;326192;326193;326194;326195;326196;326197;326198;326199;326200;326201;326202 258266;258267;258268;258269;258270;258271;258272;258273;258274;258275;258276;258277;258278;258279;258280;258281 258266 16 NVIFQPVAELKK Unmodified 1384.8078 0.80783613 2064 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 1 1 1 2 2 1 1 70.016 70.118 2;3 0.0019048 80253 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 39.878 32.71 162920000 0 0 0 7518700 9245600 9252000 15989000 10196000 9025600 14912000 12059000 31487000 16886000 8298500 18048000 39124 2064 34913 326203;326204;326205;326206;326207;326208;326209;326210;326211;326212;326213;326214;326215;326216 258282;258283;258284;258285;258286;258287;258288 258287 7 NVIGLQMGTNR Unmodified 1201.6237 0.62374052 1391 P37802 TAGLN2 Transgelin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 57.676 57.794 2 8.2413E-11 64638 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 152.34 120.12 1333100000 0 0 0 48472000 37322000 78658000 63734000 55884000 51026000 87753000 188000000 146480000 63498000 130030000 382250000 39125 1391 34914 326217;326218;326219;326220;326221;326222;326223;326224;326225;326226;326227;326228 258289;258290;258291;258292;258293;258294;258295;258296;258297;258298;258299;258300;258301;258302;258303;258304;258305 258293 17 NVIGLQMGTNR Oxidation (M) 1217.6187 0.61865515 1391 P37802 TAGLN2 Transgelin-2 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.56 39.739 2 0.00016897 43753 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 105.4 93.628 700750000 0 0 0 39748000 25575000 41790000 53764000 30830000 31528000 53456000 90427000 94264000 41258000 57661000 140450000 39126 1391 34914 326229;326230;326231;326232;326233;326234;326235;326236;326237;326238;326239;326240 258306;258307;258308;258309;258310;258311;258312;258313;258314;258315;258316;258317 258315 2155 12 NVIHASDSVEGAQR Unmodified 1481.7223 0.7222686 177 O00746 NME4 Nucleoside diphosphate kinase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 25.126 25.31 3 0.0026035 26789 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 29.139 22.662 51076000 0 0 0 0 5549800 0 8216800 10843000 5870800 7086900 6316100 7193000 0 0 0 39127 177 34915 326241;326242;326243;326244;326245;326246;326247 258318;258319;258320;258321;258322 258320 5 NVIHPFLSR Unmodified 1081.6033 0.60326308 1210 P26640 VARS Valine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 51.949 52.157 2 0.0036937 57849 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 101.72 82.018 162050000 0 0 0 5329300 0 29376000 5607900 5090400 11088000 10616000 12762000 26322000 9005300 13657000 33197000 39128 1210 34916 326248;326249;326250;326251;326252;326253;326254;326255;326256;326257;326258 258323;258324;258325;258326;258327;258328;258329;258330;258331;258332 258332 10 NVIIWGNHSSTQYPDVNHAK Unmodified 2279.1083 0.10832826 1422 P40925 MDH1 Malate dehydrogenase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 2 4 2 1 1 1 1 63.678 61.199 3;4 6.2855E-72 67932 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 156.15 156.15 312580000 182330000 0 0 0 0 0 0 0 0 0 10347000 20555000 0 13586000 85762000 39129 1422 34917 326259;326260;326261;326262;326263;326264 258333;258334;258335;258336;258337;258338 258333 6 NVILEVNEAVLTESMIQNLIK Unmodified 2369.2876 0.28759775 417 O60610 DIAPH1 Protein diaphanous homolog 1 yes yes 0 0 0 By MS/MS 2 0 1 1 103.41 95.28 3 5.257E-59 122488 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 116.98 110.25 7256100 7256100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39130 417 34918 326265 258339 258339 1 NVIPALELVEPIK Unmodified 1433.8494 0.84936659 844 P07602 PSAP Prosaposin;Saposin-A;Saposin-B-Val;Saposin-B;Saposin-C;Saposin-D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 92.863 91.698 2 5.5989E-10 114414 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.77 105.55 186500000 8190200 155760000 2310800 0 1093200 1289700 1084400 1382300 1495800 2191500 1904300 2411700 1531800 1710400 4140400 39131 844 34919 326266;326267;326268;326269;326270;326271;326272;326273;326274;326275;326276;326277;326278;326279;326280 258340;258341;258342;258343;258344;258345;258346 258341 5 NVISSSSFK Unmodified 967.49746 0.4974606 2232 Q13098 GPS1 COP9 signalosome complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 37.07 37.449 2 0.0033124 39976 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.429 78.208 131800000 0 0 0 0 0 0 0 19880000 0 30990000 31005000 0 0 0 49928000 39132 2232 34920 326281;326282;326283;326284;326285 258347;258348;258349;258350 258347 4 NVIVHTNPDPSNTVNR Unmodified 1775.8915 0.89145919 2970 Q6T4R5 NHS Nance-Horan syndrome protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 36.363 36.556 3 0.010552 40314 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 33.265 29.424 62497000 0 0 0 0 6363600 0 6338100 6144400 5755900 10475000 8515900 0 0 9770900 9133200 39133 2970 34921 326286;326287;326288;326289;326290;326291;326292;326293 258351;258352;258353;258354;258355 258353 5 NVIVLQTVLQEVR Unmodified 1509.8879 0.88787736 5110 Q9Y2L1 DIS3 Exosome complex exonuclease RRP44 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 92.053 92.223 2 0.0036765 107223 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 67.334 47.03 3108500 0 0 0 0 0 0 0 0 0 0 1172400 0 0 0 1936100 39134 5110 34922 326294;326295 258356;258357 258357 1 NVIVNGLVLASDGQK Unmodified 1525.8464 0.84640648 1441 P41252 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.43 3.14 5 1 24 1 3 2 2 2 2 2 2 2 2 2 2 2 2 2 79.174 78.357 2;3 5.5906E-50 99007 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 163.78 144.54 996840000 60165000 515290000 66252000 13345000 16114000 30612000 16340000 21085000 18315000 47441000 32901000 41960000 21594000 29487000 65937000 39135 1441 34923 326296;326297;326298;326299;326300;326301;326302;326303;326304;326305;326306;326307;326308;326309;326310;326311;326312;326313;326314;326315;326316;326317;326318;326319;326320;326321;326322;326323;326324;326325 258358;258359;258360;258361;258362;258363;258364;258365;258366;258367;258368;258369;258370;258371;258372;258373;258374;258375;258376;258377;258378;258379;258380;258381;258382;258383;258384;258385 258371 17 NVIYHAVK Unmodified 942.5287 0.52870115 5193 Q9Y4C1 KDM3A Lysine-specific demethylase 3A yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 21.673 21.81 2 0.029825 22552 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 55.902 31.703 53582000 0 0 0 0 5411800 10245000 7751400 0 7858300 7710500 0 0 0 7129100 7475300 39136 5193 34924 326326;326327;326328;326329;326330;326331;326332 258386;258387 258386 2 NVKPDQWVK Unmodified 1112.5978 0.59784335 1771 P55786 NPEPPS Puromycin-sensitive aminopeptidase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 40.681 35.589 2 0.0051009 49415 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 137.14 112.98 326430000 230820000 48383000 47220000 0 0 0 0 0 0 0 0 0 0 0 0 39137 1771 34925 326333;326334;326335 258388 258388 0 NVLCGNIPPDLFAR Unmodified 1584.8082 0.80824683 1149 P23193 TCEA1 Transcription elongation factor A protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 85.316 85.484 2 0.0040662 98753 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.592 36.36 6040000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6040000 39138 1149 34926 326336 258389 258389 1 NVLCSACSGQGGK Unmodified 1336.5864 0.58636874 440 O60884 DNAJA2 DnaJ homolog subfamily A member 2 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 25.279 21.109 2 5.7586E-06 27700 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.09 111.23 116700000 0 116700000 0 0 0 0 0 0 0 0 0 0 0 0 0 39139 440 34927 326337;326338;326339 258390;258391;258392 258390 3 NVLDGELLNR Unmodified 1141.6091 0.60913632 2179 Q10570 CPSF1 Cleavage and polyadenylation specificity factor subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 67.687 68.063 2 0.010635 77371 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.478 58.492 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39140 2179 34928 326340;326341;326342 258393;258394;258395 258393 3 NVLFSHLDDNER Unmodified 1457.6899 0.68990583 927 P10644 PRKAR1A cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 2 1 1 1 1 2 2 1 1 2 56.986 57.229 2;3 0.00057005 64984 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 72.958 55.746 193390000 0 0 0 9929200 0 26975000 12489000 8203500 7456000 9651300 22272000 27741000 10350000 0 58324000 39141 927 34929 326343;326344;326345;326346;326347;326348;326349;326350;326351;326352;326353;326354;326355;326356;326357 258396;258397;258398;258399;258400;258401;258402;258403;258404;258405;258406;258407;258408 258402 10 NVLGHMQQGGAPSPFDR Unmodified 1809.8581 0.85805057 2064 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 61.14 61.367 3 4.2098E-05 69324 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 69.805 57.013 153880000 0 0 0 0 0 18150000 0 29269000 0 0 0 0 26304000 31160000 48995000 39142 2064 34930 326358;326359;326360;326361;326362 258409;258410;258411;258412;258413;258414;258415 258414 6 NVLGHMQQGGAPSPFDR Oxidation (M) 1825.853 0.85296519 2064 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 48.654 48.808 3 1.8059E-07 54636 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 83.404 73.747 382140000 0 0 0 19291000 30483000 0 27467000 29073000 20764000 43799000 40961000 74248000 0 44064000 51989000 39143 2064 34930 326363;326364;326365;326366;326367;326368;326369;326370;326371;326372 258416;258417;258418;258419;258420;258421;258422;258423;258424 258416 3355 9 NVLGHMQQGGAPSPFDRNFGTK Oxidation (M) 2373.1284 0.12841177 2064 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type yes yes 0 1 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 15 1 2 1 2 2 2 2 2 1 57.342 57.521 3;4 2.5883E-16 65985 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 79.942 71.472 458620000 0 0 0 17533000 0 99181000 5771900 42092000 81542000 33976000 0 81002000 68996000 0 28531000 39144 2064 34931 326373;326374;326375;326376;326377;326378;326379;326380;326381;326382;326383;326384;326385;326386;326387 258425;258426;258427;258428;258429;258430;258431;258432;258433;258434 258431 3355 10 NVLGHMQQGGSPTPFDR Oxidation (M) 1855.8635 0.86352988 861 P08237 PFKM ATP-dependent 6-phosphofructokinase, muscle type yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 45.668 45.904 3 3.575E-14 51520 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 94.203 85.495 348910000 0 0 0 0 21029000 39877000 28180000 15101000 26243000 34763000 31608000 51318000 35425000 28035000 37330000 39145 861 34932 326388;326389;326390;326391;326392;326393;326394;326395;326396;326397;326398 258435;258436;258437;258438;258439;258440;258441;258442;258443;258444;258445;258446 258443 1090 12 NVLGHMQQGGSPTPFDR Unmodified 1839.8686 0.86861526 861 P08237 PFKM ATP-dependent 6-phosphofructokinase, muscle type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 1 1 1 1 2 1 2 1 2 2 2 58.425 58.598 2;3 5.6021E-14 65772 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 114.28 108.15 251610000 0 0 0 9340800 7999700 23034000 8058600 21905000 18864000 18347000 26070000 27856000 20664000 22835000 46640000 39146 861 34932 326399;326400;326401;326402;326403;326404;326405;326406;326407;326408;326409;326410;326411;326412;326413;326414;326415 258447;258448;258449;258450;258451;258452;258453 258447 3 NVLGHMQQGGSPTPFDRNFATK Oxidation (M) 2417.1546 0.15462652 861 P08237 PFKM ATP-dependent 6-phosphofructokinase, muscle type yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 2 1 1 1 1 2 2 1 2 56.286 56.479 3;4 4.9898E-43 63739 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 105.38 101.11 476090000 0 0 0 21195000 7949400 72121000 0 37093000 14604000 37989000 14086000 97276000 80946000 11752000 81075000 39147 861 34933 326416;326417;326418;326419;326420;326421;326422;326423;326424;326425;326426;326427;326428;326429;326430 258454;258455;258456;258457;258458;258459;258460;258461;258462 258462 1090 9 NVLGHMQQGGSPTPFDRNFATK Unmodified 2401.1597 0.1597119 861 P08237 PFKM ATP-dependent 6-phosphofructokinase, muscle type yes yes 0 0 1 By matching By MS/MS By MS/MS 10 0 5 1 2 2 65.368 65.69 3;4 3.314E-06 74570 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.333 46.982 72306000 0 0 0 0 0 0 0 5536900 10173000 0 0 0 0 0 56596000 39148 861 34933 326431;326432;326433;326434;326435 258463;258464;258465 258464 3 NVLGLVPQALPK Unmodified 1247.7602 0.76015765 3312 Q8N1G0 ZNF687 Zinc finger protein 687 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83.998 83.124 2 0.0014767 95957 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 67.563 55.516 139550000 12985000 23132000 0 2679900 5938700 6788300 4345700 5017000 5722100 13169000 9293400 11179000 10115000 8938400 20243000 39149 3312 34934 326436;326437;326438;326439;326440;326441;326442;326443;326444;326445;326446;326447;326448;326449 258466;258467;258468;258469;258470;258471;258472;258473;258474;258475;258476 258471 11 NVLIFDLGGGTFDVSILTIEDGIFEVK Unmodified 2910.5266 0.52664205 934;1743 P11142;P54652 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 no no 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 104.89 101.29 3 0.004621 124874 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 27.09 20.795 4623800 0 3523300 1100500 0 0 0 0 0 0 0 0 0 0 0 0 39150 934;1743 34935 326450;326451;326452 258477;258478 258477 2 NVLIVEDIIDTGK Unmodified 1427.7872 0.78716026 729 P00492 HPRT1 Hypoxanthine-guanine phosphoribosyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.24 3.77 1 3 2 11 3 2 1 1 1 2 1 1 1 1 1 1 1 90.888 89.882 2 7.7072E-09 94869 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 150.94 124.43 338450000 153900000 114850000 26274000 1160800 0 1320300 0 1224000 663580 3099200 4125200 4108600 1155800 4270200 22302000 39151 729 34936 326453;326454;326455;326456;326457;326458;326459;326460;326461;326462;326463;326464;326465;326466;326467;326468;326469 258479;258480;258481;258482;258483;258484;258485;258486;258487;258488;258489;258490;258491;258492;258493;258494 258485 13 NVLIVEDVVGTGRTMK Oxidation (M) 1745.9346 0.93456956 4601 Q9NRG1 PRTFDC1 Phosphoribosyltransferase domain-containing protein 1 yes yes 0 1 1 By MS/MS 2 0 1 1 80.875 72.744 3 0.00090169 95355 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.158 53.605 29078000 29078000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39152 4601 34937 326470 258495 258495 6003 1 NVLIVEDVVGTGRTMK Unmodified 1729.9397 0.93965493 4601 Q9NRG1 PRTFDC1 Phosphoribosyltransferase domain-containing protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 84.53 76.399 3 0.0040387 99753 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.37 33.088 8337300 8337300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39153 4601 34937 326471 258496 258496 1 NVLLDPQLVPGGGASEMAVAHALTEK Unmodified 2616.3581 0.35813694 1570 P49368 CCT3 T-complex protein 1 subunit gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 94.918 91.26 3 3.8693E-22 113396 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.496 65.302 35520000 0 33957000 1563200 0 0 0 0 0 0 0 0 0 0 0 0 39154 1570 34938 326472;326473;326474 258497;258498 258497 2 NVLLEQSGIDILNK Unmodified 1554.8617 0.86172219 2833 Q5VZK9 LRRC16A Leucine-rich repeat-containing protein 16A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 7 3.87 3 5 1 1 1 1 1 1 1 1 85.111 83.197 2 5.3664E-31 103839 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 174.1 145.14 313750000 8501300 275160000 5111200 1287800 0 6490000 0 7592500 4948000 0 0 0 4657600 0 0 39155 2833 34939 326475;326476;326477;326478;326479;326480;326481;326482 258499;258500;258501;258502;258503;258504 258500 6 NVLLLGEDGAGK Unmodified 1184.6401 0.6401021 5282 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 64.292 62.952 2 0.0013151 71921 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 68.893 47.593 420990000 8495100 214940000 2614100 13588000 11292000 18826000 14173000 10447000 8693800 20353000 19535000 20532000 16822000 16635000 24049000 39156 5282 34940 326483;326484;326485;326486;326487;326488;326489;326490;326491;326492;326493;326494;326495;326496;326497;326498 258505;258506;258507;258508;258509;258510;258511;258512;258513;258514;258515;258516;258517;258518;258519;258520;258521 258507 17 NVLLNNSEK Unmodified 1029.5455 0.54547343 2168 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.154 27.352 2 0.0037735 27877 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.311 48.962 649620000 0 0 0 35988000 33501000 71419000 35367000 31011000 30375000 66986000 63506000 76060000 55348000 54859000 95197000 39157 2168 34941 326499;326500;326501;326502;326503;326504;326505;326506;326507;326508;326509;326510 258522;258523;258524;258525;258526;258527;258528;258529;258530 258524 9 NVLLNSLQK Unmodified 1027.6026 0.60259438 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58.711 57.579 2 0.00066779 78821 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 121.62 90.561 398630000 131630000 85717000 18944000 0 12249000 11704000 13916000 12287000 13231000 14708000 16372000 21933000 11863000 13371000 20708000 39158 3443 34942 326511;326512;326513;326514;326515;326516;326517;326518;326519;326520;326521;326522;326523;326524 258531;258532;258533;258534;258535;258536;258537;258538;258539;258540;258541;258542;258543 258537 12 NVLQFTEEK Unmodified 1106.5608 0.56078914 3897 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 54.925 55.057 2 0.0032698 61109 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 106.42 69.866 291280000 0 0 0 18147000 19823000 25704000 20488000 15203000 17036000 33406000 31860000 25635000 26161000 22146000 35671000 39159 3897 34943 326525;326526;326527;326528;326529;326530;326531;326532;326533;326534;326535;326536 258544;258545;258546;258547;258548;258549;258550;258551;258552;258553;258554;258555;258556;258557;258558 258548 12 NVLQGGESTK Unmodified 1031.5247 0.52473799 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 16.072 15.857 2 0.0028265 19148 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.25 63.404 177420000 0 80094000 0 5423200 4349100 9345600 8310000 6634300 6117700 10948000 0 16822000 15292000 14084000 0 39160 2193 34944 326537;326538;326539;326540;326541;326542;326543;326544;326545;326546;326547 258559;258560;258561;258562;258563;258564 258560 6 NVLSDSRPAMAPGSSHLGAPASTTTAADATPSGSLAR Oxidation (M) 3537.7118 0.71178685 4104 Q9BR76 CORO1B Coronin-1B yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 60.898 61.214 4 1.4491E-30 69111 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.455 50.252 47939000 0 0 0 0 0 7692900 0 0 0 0 16302000 0 0 0 23944000 39161 4104 34945 326548;326549;326550 258565;258566;258567 258566 5601 3 NVLSETPAICPPQNTENQRPK Unmodified 2392.1805 0.18050692 535 O75717 WDHD1 WD repeat and HMG-box DNA-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.43 2.06 1 13 1 2 1 1 1 1 1 1 2 1 1 1 60.606 60.397 3 2.041E-06 75495 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 66.874 58.977 115890000 0 0 18871000 4074200 4580200 0 11617000 8401800 5120600 8063000 7881600 14291000 8220100 9053600 15714000 39162 535 34946 326551;326552;326553;326554;326555;326556;326557;326558;326559;326560;326561;326562;326563;326564 258568;258569;258570;258571;258572;258573;258574;258575;258576;258577;258578;258579;258580;258581;258582;258583;258584;258585 258578 16 NVLSSLAVYAEDSEPESDGEAGIEAVGSAAEEK Unmodified 3322.5212 0.52123492 4907 Q9UHR5 SAP30BP SAP30-binding protein yes yes 0 0 0 By MS/MS 2 0 1 1 93.391 90.897 3 0.047587 110053 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 13.948 7.5848 1836600 0 0 1836600 0 0 0 0 0 0 0 0 0 0 0 0 39163 4907 34947 326565 258586 258586 1 NVLTNTQSENER Unmodified 1403.6641 0.66408501 3495 Q8TD16 BICD2 Protein bicaudal D homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 23.165 23.434 2 5.9817E-08 23601 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 140.75 123.32 32642000 0 0 0 2546400 0 0 2941000 3009400 0 3806500 0 5952100 2791700 3597600 7997600 39164 3495 34948 326566;326567;326568;326569;326570;326571;326572;326573 258587;258588;258589;258590;258591;258592;258593;258594;258595 258590 9 NVLVESEHQVK Unmodified 1280.6725 0.67246486 1159 P23458 JAK1 Tyrosine-protein kinase JAK1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 2 2 1 1 2 1 1 29.671 29.7 2;3 0.014861 32110 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 45.137 36.718 33972000 0 0 0 0 5323700 5645900 3228800 4231300 5029400 6138400 4374800 0 0 0 0 39165 1159 34949 326574;326575;326576;326577;326578;326579;326580;326581;326582;326583 258596;258597 258596 2 NVLVIGTTGSQTTFLPEGELPECAR Unmodified 2688.3429 0.3428808 2796 Q5TDH0 DDI2 Protein DDI1 homolog 2 yes yes 0 0 0 By MS/MS 3 0 1 1 91.295 88.076 3 0.040489 105512 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 18.497 15.769 3524500 0 3524500 0 0 0 0 0 0 0 0 0 0 0 0 0 39166 2796 34950 326584 258598 258598 1 NVLVSEDNVAK Unmodified 1186.6194 0.61936665 1438 P41240 CSK Tyrosine-protein kinase CSK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 39.496 39.521 2 0.0055796 44389 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 58.699 47.534 53464000 0 0 0 5401300 5680100 0 7352300 0 6454900 10651000 11558000 0 6366900 0 0 39167 1438 34951 326585;326586;326587;326588;326589;326590;326591;326592;326593;326594;326595 258599;258600;258601;258602;258603;258604;258605;258606;258607;258608;258609 258609 11 NVLVSSNDCVK Unmodified 1233.6023 0.60233638 2114 Q05397 PTK2 Focal adhesion kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 34.478 34.611 2 0.0038839 38406 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 62.823 45.003 68993000 0 0 0 2748300 2802600 7836300 4449400 4030700 3631000 7040700 10924000 0 6578400 7202800 11748000 39168 2114 34952 326596;326597;326598;326599;326600;326601;326602;326603;326604;326605;326606 258610;258611;258612;258613;258614;258615;258616;258617;258618;258619;258620 258620 11 NVMEQFNPGLR Unmodified 1303.6343 0.63430521 4906 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS 10 0 5 1 1 1 1 1 68.954 69.182 2 0.0063685 79469 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 56.729 41.579 8559800 0 0 0 0 0 0 2346400 1558700 0 0 0 2794700 0 1860100 0 39169 4906 34953 326607;326608;326609;326610;326611 258621;258622;258623 258623 3 NVMLLPVGSADDGAHSQNEK Oxidation (M) 2096.9797 0.97968185 3910 Q96KP4 CNDP2 Cytosolic non-specific dipeptidase yes yes 0 1 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 65.211 58.885 3 5.7126E-13 71719 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 94.45 88.182 205850000 17629000 188220000 0 0 0 0 0 0 0 0 0 0 0 0 0 39170 3910 34954 326612;326613;326614 258624;258625;258626 258625 5410 3 NVMLLPVGSADDGAHSQNEK Unmodified 2080.9848 0.98476723 3910 Q96KP4 CNDP2 Cytosolic non-specific dipeptidase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.25 3.34 2 1 1 1 2 1 72.347 68.028 3 2.1487E-06 87348 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.644 61.642 266770000 11935000 246010000 0 0 0 0 0 0 0 0 0 0 0 0 8831200 39171 3910 34954 326615;326616;326617;326618 258627;258628;258629;258630 258627 4 NVMNDAWR Unmodified 1004.4498 0.4497989 1006 P14735 IDE Insulin-degrading enzyme yes yes 0 0 0 By MS/MS 10 0 1 1 45.023 44.466 2 0.045478 50509 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 75.213 52.473 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39172 1006 34955 326619 258631 258631 1 NVMNMQNR Unmodified 1005.4484 0.4484187 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 21.853 22.235 2 0.035209 22102 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.636 41.763 42412000 0 0 0 0 0 5528200 0 0 0 7034500 6567200 7243100 0 6247900 9790900 39173 619 34956 326620;326621;326622;326623;326624;326625 258632;258633 258633 2 NVMNMQNR Oxidation (M) 1021.4433 0.44333332 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 8.0947 8.2232 2 0.022198 6745 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 53.554 45.883 22829000 0 0 0 1470900 830860 1728500 1478200 0 1425000 2508700 3760000 2997000 1962000 2121000 2546600 39174 619 34956 326626;326627;326628;326629;326630;326631;326632;326633;326634;326635;326636 258634;258635;258636;258637 258637 4 NVMSAFGLTDDQVSGPPSAPAEDR Oxidation (M) 2476.1176 0.11763189 3654 Q92734 TFG Protein TFG yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 2 2 1 1 2 1 2 2 2 2 75.212 75.288 2;3 8.4227E-173 86874 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 198.07 178.74 256600000 0 0 0 1355000 12890000 0 17402000 12865000 8309700 29412000 10421000 52835000 17407000 28667000 65035000 39175 3654 34957 326637;326638;326639;326640;326641;326642;326643;326644;326645;326646;326647;326648;326649;326650;326651;326652;326653;326654 258638;258639;258640;258641;258642;258643;258644;258645;258646;258647;258648 258647 5170 10 NVMSAFGLTDDQVSGPPSAPAEDR Unmodified 2460.1227 0.12271727 3654 Q92734 TFG Protein TFG yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 2 2 2 1 2 82.573 82.731 2;3 3.9832E-28 95958 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 96.163 89.583 106320000 0 0 0 0 0 0 0 3462600 0 9199500 11108000 10598000 0 10492000 61464000 39176 3654 34957 326655;326656;326657;326658;326659;326660;326661;326662;326663;326664 258649;258650;258651;258652;258653;258654;258655;258656;258657;258658 258658 7 NVMVVSCVYPSSEK Oxidation (M) 1613.7429 0.74292896 4736 Q9NY27 PPP4R2 Serine/threonine-protein phosphatase 4 regulatory subunit 2 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 58.575 53.235 2 3.0245E-06 68259 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.87 87.002 48842000 0 48842000 0 0 0 0 0 0 0 0 0 0 0 0 0 39177 4736 34958 326665;326666 258659 258659 6114 1 NVMVVSCVYPSSEK Unmodified 1597.748 0.74801434 4736 Q9NY27 PPP4R2 Serine/threonine-protein phosphatase 4 regulatory subunit 2 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 69.555 63.687 2 0.00081959 73474 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.763 62.704 42771000 0 42771000 0 0 0 0 0 0 0 0 0 0 0 0 0 39178 4736 34958 326667;326668 258660;258661;258662 258662 3 NVNHSWIER Unmodified 1153.5629 0.56285483 2684 Q4G0J3 LARP7 La-related protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 30.488 30.785 3 0.031245 31935 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.338 42.338 47709000 0 0 0 0 0 3943300 3594900 0 4471700 5207500 0 10878000 5335100 0 14278000 39179 2684 34959 326669;326670;326671;326672;326673;326674;326675 258663 258663 1 NVNILSEPEAAYTFK Unmodified 1694.8516 0.85155143 3200 Q86XX4 FRAS1 Extracellular matrix protein FRAS1 yes yes 0 0 0 By matching By matching By MS/MS By matching 10 0 4 1 1 1 1 80.752 80.625 2 0.034025 93282 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 30.205 6.7371 12055000 0 0 0 2013700 1982300 5167100 2891800 0 0 0 0 0 0 0 0 39180 3200 34960 326676;326677;326678;326679 258664 258664 1 NVNNEVHFFENNNFNTIANK Unmodified 2378.104 0.10397116 4242 Q9BY44 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 80.221 76.289 3 3.4862E-09 98280 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.737 82.402 35998000 20393000 0 0 0 0 0 0 0 0 0 0 0 0 0 15605000 39181 4242 34961 326680;326681 258665;258666;258667 258666 3 NVNQEVVDFEK Unmodified 1319.6357 0.635745 4167 Q9BUP3 HTATIP2 Oxidoreductase HTATIP2 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 56.4 54.523 2 2.0824E-06 69417 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.16 115.33 241770000 5058200 143510000 0 0 0 16591000 22604000 0 9691900 0 27139000 0 17178000 0 0 39182 4167 34962 326682;326683;326684;326685;326686;326687;326688 258668;258669;258670;258671;258672;258673;258674 258669 7 NVNQSLLELHK Unmodified 1293.7041 0.70409934 766 P02794 FTH1 Ferritin heavy chain;Ferritin heavy chain, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 4.17 3.39 7 2 3 3 4 2 1 1 1 58.087 53.771 2;3 2.5411E-07 73566 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 138.66 106.72 4199800000 1966100000 1207800000 969190000 0 29384000 0 0 24576000 0 0 2721200 0 0 0 0 39183 766 34963 326689;326690;326691;326692;326693;326694;326695;326696;326697;326698;326699;326700 258675;258676;258677;258678;258679;258680;258681;258682;258683;258684;258685;258686;258687;258688;258689;258690;258691 258687 15 NVNSNLITWNR Unmodified 1329.6789 0.67894722 2557 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.105 66.189 2 3.9666E-148 76033 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 225.66 214.44 346660000 0 0 0 13789000 13457000 38848000 17126000 23205000 14046000 40403000 42034000 32735000 23998000 28053000 58970000 39184 2557 34964 326701;326702;326703;326704;326705;326706;326707;326708;326709;326710;326711;326712 258692;258693;258694;258695;258696;258697;258698;258699;258700;258701;258702;258703;258704;258705;258706;258707 258692 16 NVNVQNFHISWK Unmodified 1484.7524 0.75244651 356 O43707 ACTN4 Alpha-actinin-4 yes yes 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 75.398 75.557 3 0.0048359 86610 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.199 47.722 113370000 0 0 0 0 0 10290000 0 2787000 3647000 3223100 6625600 8596200 3440000 7146300 67615000 39185 356 34965 326713;326714;326715;326716;326717;326718;326719;326720;326721 258708 258708 0 NVPAAREPEVLSTMAIIVNK Unmodified 2151.1722 0.17217407 237 O14980 XPO1 Exportin-1 yes yes 0 0 1 By matching By MS/MS By MS/MS 10 0 3 1 1 1 85.835 85.99 3 0.0037622 99420 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.707 29.037 14836000 0 0 0 0 0 0 0 2072500 0 3954300 0 0 0 0 8809000 39186 237 34966 326722;326723;326724 258709;258710 258710 2 NVPESSPHSPCEGLPSEAALTPRPEGK Unmodified 2842.3556 0.35557075 34 A7E2V4 ZSWIM8 Zinc finger SWIM domain-containing protein 8 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 60.437 60.574 4 1.4847E-05 68970 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 33.265 29.697 87450000 0 0 0 5929400 0 7755100 9551800 10802000 0 10132000 0 11763000 11578000 11171000 8768000 39187 34 34967 326725;326726;326727;326728;326729;326730;326731;326732;326733 258711;258712;258713;258714;258715 258711 5 NVPFSELNLK Unmodified 1159.6237 0.62372375 2456 Q14966 ZNF638 Zinc finger protein 638 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 80.28 76.243 2 0.036461 94767 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 56.432 37.328 102870000 0 102870000 0 0 0 0 0 0 0 0 0 0 0 0 0 39188 2456 34968 326734;326735 258716 258716 1 NVPGFLPTNDLSQPTGFLAQPMK Oxidation (M) 2487.2468 0.24679557 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 8 1 1 2 1 1 1 1 90.155 90.301 2;3 1.5833E-05 105045 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.704 43.903 33764000 0 0 0 0 0 0 1871500 1346700 0 18547000 2427200 3832000 0 1375700 4363500 39189 19 34969 326736;326737;326738;326739;326740;326741;326742;326743 258717;258718 258718 21 2 NVPGLAILLSK Unmodified 1123.6965 0.69649476 4166 Q9BUL9 RPP25 Ribonuclease P protein subunit p25 yes yes 0 0 0 By MS/MS 2 0 1 1 95.558 87.428 2 0.022088 112998 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.785 33.755 6361400 6361400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39190 4166 34970 326744 258719 258719 1 NVPILYTASQACLQHPDVAAYK Unmodified 2458.2315 0.23147986 1340 P35221 CTNNA1 Catenin alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80.77 79.793 3 1.5648E-66 92025 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 122.01 118.91 354060000 112030000 86199000 7627100 2528500 3689000 9887900 3137700 8189900 8219900 21275000 16244000 16007000 5333100 10096000 43591000 39191 1340 34971 326745;326746;326747;326748;326749;326750;326751;326752;326753;326754;326755;326756;326757;326758;326759 258720;258721;258722;258723;258724;258725;258726;258727;258728;258729;258730;258731;258732;258733 258723 14 NVPLPEFPEHPFQEEHLK Unmodified 2186.0797 0.07965389 1006 P14735 IDE Insulin-degrading enzyme yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.38 0.484 5 3 3 4 1 84.702 79.897 3;4 0.00080748 101131 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 53.453 50.71 326250000 56802000 267040000 2413600 0 0 0 0 0 0 0 0 0 0 0 0 39192 1006 34972 326760;326761;326762;326763;326764;326765;326766;326767 258734;258735;258736;258737;258738;258739;258740 258734 5 NVPLPVIAELPPK Unmodified 1385.8282 0.82823722 750 P01871 IGHM Ig mu chain C region yes yes 0 0 0 By MS/MS 10 0 1 1 87.332 87.527 2 0.013858 101695 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 41.164 29.801 5203300 0 0 0 0 0 0 0 5203300 0 0 0 0 0 0 0 39193 750 34973 326768 258741;258742;258743 258742 3 NVPNLHVMK Oxidation (M) 1066.5593 0.55934935 1513 P46783;Q9NQ39 RPS10;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 32.479 31.416 2 0.0059508 34305 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 67.903 47.348 589380000 272620000 75712000 96442000 12217000 11291000 13702000 12867000 10205000 8967800 12334000 0 0 22173000 16037000 24811000 39194 1513 34974 326769;326770;326771;326772;326773;326774;326775;326776;326777;326778;326779;326780;326781 258744;258745;258746;258747;258748;258749;258750;258751;258752;258753;258754;258755;258756;258757;258758 258758 2393 15 NVPNLHVMK Unmodified 1050.5644 0.56443473 1513 P46783;Q9NQ39 RPS10;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43.219 42.521 2 0.0079039 55804 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 91.626 56.734 609640000 292740000 0 54884000 6909800 8821900 11158000 8680000 12372000 9417400 26242000 31736000 42247000 31530000 20312000 52586000 39195 1513 34974 326782;326783;326784;326785;326786;326787;326788;326789;326790;326791;326792;326793;326794;326795 258759;258760;258761;258762 258761 4 NVPQVVNVQELK Unmodified 1365.7616 0.76161421 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 70.541 69.465 2 2.1485E-09 87711 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 148.91 128.04 1038300000 3883800 376170000 0 27852000 33140000 41866000 48845000 57944000 46298000 55507000 55746000 76232000 60093000 68987000 85697000 39196 1364 34975 326796;326797;326798;326799;326800;326801;326802;326803;326804;326805;326806;326807;326808;326809;326810 258763;258764;258765;258766;258767;258768;258769;258770;258771;258772;258773;258774;258775;258776 258766 7 NVPVITGSK Unmodified 913.52328 0.52328142 1343 P35232 PHB Prohibitin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 33.457 33.818 2 0.034739 36628 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 46.39 24.619 25323000 0 0 0 4173500 0 0 0 0 0 0 3747400 8309800 3849900 2039400 3203100 39197 1343 34976 326811;326812;326813;326814;326815;326816 258777 258777 1 NVPYGNIQSR Unmodified 1146.5782 0.57817054 2177 Q10471 GALNT2 Polypeptide N-acetylgalactosaminyltransferase 2;Polypeptide N-acetylgalactosaminyltransferase 2 soluble form yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.254 36.435 2 0.010746 39674 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 55.461 37.237 165710000 0 0 0 8937800 7907300 11997000 15985000 11928000 9548600 11939000 14853000 17482000 19976000 12953000 22203000 39198 2177 34977 326817;326818;326819;326820;326821;326822;326823;326824;326825;326826;326827;326828 258778;258779;258780;258781;258782;258783;258784 258781 7 NVPYVFVR Unmodified 992.54435 0.54435122 1770 P55769 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.617 69.692 2 0.0105 80463 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 79.454 63.3 230490000 0 0 0 9579000 11223000 17603000 16207000 15157000 12341000 26177000 23626000 24955000 18858000 17494000 37268000 39199 1770 34978 326829;326830;326831;326832;326833;326834;326835;326836;326837;326838;326839;326840 258785;258786;258787;258788;258789;258790;258791;258792 258789 8 NVQDAIADAEQR Unmodified 1328.6321 0.6320566 79 CON__P35908v2;P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 48.904 49.062 2;3 7.2472E-15 54462 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 156.48 143.52 + 5129800000 0 0 0 552270000 315600000 446670000 260970000 512910000 419640000 321200000 473030000 687440000 686430000 279730000 173960000 39200 79 34979 326841;326842;326843;326844;326845;326846;326847;326848;326849;326850;326851;326852;326853;326854;326855;326856;326857;326858;326859;326860;326861;326862;326863;326864 258793;258794;258795;258796;258797;258798;258799;258800;258801;258802;258803;258804;258805;258806;258807;258808;258809;258810;258811;258812;258813;258814;258815;258816;258817;258818;258819 258809 21 NVQDAIADAEQRGEHALK Unmodified 1963.9712 0.97116607 79 CON__P35908v2;P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.3 2.25 4 42 3 1 3 3 5 3 4 4 4 3 3 3 3 4 72.308 71.916 3;4 8.4098E-21 82744 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 104.44 93.823 + 2513700000 285490000 195980000 0 27048000 17846000 210000000 14699000 206620000 137830000 231210000 287900000 259510000 76874000 79410000 483260000 39201 79 34980 326865;326866;326867;326868;326869;326870;326871;326872;326873;326874;326875;326876;326877;326878;326879;326880;326881;326882;326883;326884;326885;326886;326887;326888;326889;326890;326891;326892;326893;326894;326895;326896;326897;326898;326899;326900;326901;326902;326903;326904;326905;326906;326907;326908;326909;326910 258820;258821;258822;258823;258824;258825;258826;258827;258828;258829;258830;258831;258832;258833;258834;258835;258836;258837;258838;258839;258840;258841;258842;258843;258844;258845;258846;258847;258848;258849;258850;258851;258852;258853;258854;258855;258856;258857 258851 30 NVQGIIEILK Unmodified 1125.6758 0.67575932 1464 P42704 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 89.651 84.497 2 0.0036161 107307 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.598 54.635 128270000 67986000 53317000 6971700 0 0 0 0 0 0 0 0 0 0 0 0 39202 1464 34981 326911;326912;326913 258858;258859;258860 258859 2 NVQHLELPK Unmodified 1076.5978 0.59784335 568 O75970 MPDZ Multiple PDZ domain protein yes yes 0 0 0 By MS/MS 2 0 1 1 46.871 43.02 2 0.038052 54216 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 61.962 31.777 2439600 0 0 2439600 0 0 0 0 0 0 0 0 0 0 0 0 39203 568 34982 326914 258861 258861 1 NVQLLFAR Unmodified 959.55525 0.55525025 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 72.683 72.752 2 0.0048933 83619 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 114.19 79.361 258350000 0 0 0 14528000 21393000 0 0 25907000 21123000 31811000 29644000 39108000 23577000 21068000 30193000 39204 3023 34983 326915;326916;326917;326918;326919;326920;326921;326922;326923;326924 258862;258863;258864;258865;258866;258867;258868;258869;258870;258871 258862 10 NVQLNDVAHLVQPSQADAR Unmodified 2074.0556 0.055564404 4727 Q9NXH9 TRMT1 tRNA (guanine(26)-N(2))-dimethyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 74.667 74.772 3 0.00031072 86295 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 50.425 41.261 79046000 0 0 0 0 3021200 5720700 2918500 0 0 0 9427200 12819000 6050500 9770000 29319000 39205 4727 34984 326925;326926;326927;326928;326929;326930;326931;326932 258872;258873;258874;258875;258876;258877 258874 6 NVQLQENEIR Unmodified 1241.6364 0.6364137 1381 P36873 PPP1CC Serine/threonine-protein phosphatase PP1-gamma catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 40.944 40.919 2 0.0018002 44332 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 101.64 64.085 36846000 0 0 0 0 6888200 0 0 0 8584000 0 0 0 0 21374000 0 39206 1381 34985 326933;326934;326935;326936;326937;326938 258878;258879;258880;258881;258882;258883 258881 6 NVQLQENEIRGLCLK Unmodified 1812.9516 0.9516166 1381 P36873 PPP1CC Serine/threonine-protein phosphatase PP1-gamma catalytic subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 77.676 71.705 2;3 0.00026862 91414 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.754 69.441 124610000 59696000 33496000 31420000 0 0 0 0 0 0 0 0 0 0 0 0 39207 1381 34986 326939;326940;326941;326942 258884;258885;258886;258887 258884 4 NVQLSLLTER Unmodified 1171.6561 0.65608651 1614 P49959 MRE11A Double-strand break repair protein MRE11A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 75.327 74.202 2 0.00092144 85890 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 113.71 97.825 140060000 6990900 0 0 0 14978000 18187000 20385000 0 22673000 27167000 29679000 0 0 0 0 39208 1614 34987 326943;326944;326945;326946;326947;326948;326949;326950 258888;258889;258890;258891;258892;258893;258894;258895;258896 258894 8 NVQLTENEIR Unmodified 1214.6255 0.62551466 1872 P62136 PPP1CA Serine/threonine-protein phosphatase PP1-alpha catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 44.5 44.673 2 0.00054132 48862 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 127.68 112.3 239880000 0 0 0 15619000 9304600 11207000 16458000 11652000 12035000 0 33262000 33170000 15610000 28781000 52780000 39209 1872 34988 326951;326952;326953;326954;326955;326956;326957;326958;326959;326960;326961;326962 258897;258898;258899;258900;258901;258902;258903;258904;258905;258906;258907;258908;258909;258910;258911;258912;258913 258901 17 NVQLTENEIRGLCLK Unmodified 1785.9407 0.94071757 1872 P62136 PPP1CA Serine/threonine-protein phosphatase PP1-alpha catalytic subunit yes yes 0 0 1 By MS/MS 2 0 1 1 80.73 72.599 3 0.006111 95189 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.188 39.904 48605000 48605000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39210 1872 34989 326963 258914 258914 1 NVQQDNSEAGTQPQVQTDAQQTSQSPPSPELTSEENK Unmodified 3996.8057 0.80568305 3633 Q92598 HSPH1 Heat shock protein 105 kDa yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 5 2 1 2 55.047 55.503 3;4 1.2259E-30 62310 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.465 50.92 43466000 0 0 0 0 0 0 0 0 0 0 14501000 0 0 4940300 24024000 39211 3633 34990 326964;326965;326966;326967;326968 258915;258916;258917 258916 3 NVQQQLDATSR Unmodified 1258.6266 0.6265773 4198 Q9BVW5 TIPIN TIMELESS-interacting protein yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.15 28.225 2 0.00079378 30201 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 77.192 66.434 17023000 0 0 0 1033500 0 0 4397400 4936700 3241700 0 0 0 0 3413500 0 39212 4198 34991 326969;326970;326971;326972;326973;326974;326975;326976;326977;326978;326979;326980 258918;258919;258920;258921;258922;258923;258924;258925;258926;258927 258922 9 NVQQQLDATSRNITEAR Unmodified 1942.9821 0.98206511 4198 Q9BVW5 TIPIN TIMELESS-interacting protein yes yes 0 0 1 By MS/MS 2 0 1 1 59.209 55.406 3 0.010398 68993 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 36.193 28.874 17601000 0 0 17601000 0 0 0 0 0 0 0 0 0 0 0 0 39213 4198 34992 326981 258928 258928 1 NVQQTVSAK Unmodified 973.51926 0.51925868 521 O75586 MED6 Mediator of RNA polymerase II transcription subunit 6 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.388 11.503 2 0.0051384 9381 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.426 52.619 49287000 0 0 0 4188300 2748700 3384600 4309800 2571800 3477500 4585100 0 7236500 4500200 3738200 8546000 39214 521 34993 326982;326983;326984;326985;326986;326987;326988;326989;326990;326991;326992 258929;258930;258931;258932;258933;258934 258931 6 NVQSMFGK Unmodified 909.43784 0.43783723 3996 Q96SY0 VWA9 von Willebrand factor A domain-containing protein 9 yes yes 0 0 0 By MS/MS 2 0 1 1 47.708 39.994 2 0.038396 55478 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.342 37.604 48064000 48064000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39215 3996 34994 326993 258935 258935 1 NVQSVITTSAPNK Unmodified 1357.7201 0.72014333 4328 Q9H0H0 INTS2 Integrator complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 42.803 42.941 2 0.0026909 48062 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 72.2 33.897 59793000 0 0 0 0 5348700 0 7621000 7689500 7011900 7057200 8847200 0 9872100 6345100 0 39216 4328 34995 326994;326995;326996;326997;326998;326999;327000;327001 258936;258937;258938;258939;258940;258941;258942;258943 258937 8 NVQSVSIIDTELK Unmodified 1444.7773 0.77732386 2557 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 1 2 2 1 1 2 1 1 1 2 2 74.43 74.517 2;3 8.0001E-14 85072 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 150.94 141.25 1163400000 0 0 0 55952000 55445000 125140000 96134000 64028000 68104000 143690000 106290000 126810000 83218000 90262000 148340000 39217 2557 34996 327002;327003;327004;327005;327006;327007;327008;327009;327010;327011;327012;327013;327014;327015;327016;327017;327018 258944;258945;258946;258947;258948;258949;258950;258951;258952;258953;258954;258955 258951 9 NVRGEFTYYEIQDNTGK Unmodified 2032.949 0.94903365 2627 Q16666 IFI16 Gamma-interferon-inducible protein 16 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 68.176 62.157 3 0.00015797 82850 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.688 51.071 24865000 21143000 0 3722200 0 0 0 0 0 0 0 0 0 0 0 0 39218 2627 34997 327019;327020 258956 258956 1 NVRTATESFASDPILYRPVAVALDTK Unmodified 2833.4974 0.49740761 1000 P14618 PKM Pyruvate kinase PKM yes yes 0 0 2 By MS/MS 3 0 1 1 90.171 86.957 4 0.00095503 104100 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 34.106 28.841 5583600 0 5583600 0 0 0 0 0 0 0 0 0 0 0 0 0 39219 1000 34998 327021 258957 258957 1 NVSDYTPLSLAASGGYVNIIK Unmodified 2181.1317 0.13174904 472;3250 Q8IWZ3;O75179 ANKHD1;ANKRD17 Ankyrin repeat and KH domain-containing protein 1;Ankyrin repeat domain-containing protein 17 no no 0 0 0 By matching By MS/MS 10 0 2 1 1 92.633 92.761 2 0.013063 107529 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 27.649 19.136 3655300 0 0 0 0 0 0 0 0 0 1955800 0 0 0 0 1699400 39220 3250;472 34999 327022;327023 258958 258958 1 NVSEELDRTPPEVSK Unmodified 1698.8424 0.84244331 2528 Q15393 SF3B3 Splicing factor 3B subunit 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.29 6 1 24 2 3 2 2 2 2 2 2 2 2 2 2 2 2 2 46.548 45.639 2;3 2.676E-49 59042 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 166.62 146.33 2661100000 6046600 595940000 58086000 73634000 106900000 115080000 126790000 143900000 107380000 152580000 262060000 267450000 175850000 216400000 252990000 39221 2528 35000 327024;327025;327026;327027;327028;327029;327030;327031;327032;327033;327034;327035;327036;327037;327038;327039;327040;327041;327042;327043;327044;327045;327046;327047;327048;327049;327050;327051;327052;327053;327054 258959;258960;258961;258962;258963;258964;258965;258966;258967;258968;258969;258970;258971;258972;258973;258974;258975;258976;258977;258978;258979;258980;258981;258982;258983;258984;258985;258986 258967 25 NVSFNPAK Unmodified 875.45012 0.45011648 3709 Q93074 MED12 Mediator of RNA polymerase II transcription subunit 12 yes yes 0 0 0 By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 30.461 30.664 2 0.032623 33095 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 54.205 27.084 54990000 0 0 0 2845900 3342900 4533100 0 5092000 3332500 4887100 5031900 7066000 6818800 5482200 6557100 39222 3709 35001 327055;327056;327057;327058;327059;327060;327061;327062;327063;327064;327065 258987;258988;258989 258988 3 NVSGISFTENMGSSQQK Unmodified 1812.8312 0.8312267 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 62.683 62.034 2 1.2021E-87 78147 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 251.24 206.81 83881000 0 55370000 0 0 0 4108100 2686900 3917200 0 3919700 6389700 0 0 0 7489600 39223 1601 35002 327066;327067;327068;327069;327070;327071;327072;327073;327074 258990;258991;258992;258993;258994;258995;258996;258997;258998 258993 9 NVSGISFTENMGSSQQK Oxidation (M) 1828.8261 0.82614132 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 53.625 48.283 2 3.9177E-09 62296 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.97 87.442 26918000 0 26918000 0 0 0 0 0 0 0 0 0 0 0 0 0 39224 1601 35002 327075;327076 258999 258999 2581 1 NVSHNPLLLLTPQK Unmodified 1572.8988 0.8987764 1522 P47712 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.62 3.02 5 24 3 1 1 1 2 2 2 2 2 3 2 2 2 2 2 79.192 78.169 2;3 2.97E-19 89939 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 160.38 128.05 941330000 246870000 52061000 8143100 4595200 24164000 69157000 33169000 51532000 46989000 76158000 53097000 66639000 46228000 49271000 113260000 39225 1522 35003 327077;327078;327079;327080;327081;327082;327083;327084;327085;327086;327087;327088;327089;327090;327091;327092;327093;327094;327095;327096;327097;327098;327099;327100;327101;327102;327103;327104;327105 259000;259001;259002;259003;259004;259005;259006;259007;259008;259009;259010;259011;259012 259000 9 NVSIGIVGK Unmodified 885.52837 0.5283668 1193 P25786 PSMA1 Proteasome subunit alpha type-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 52.182 51.033 2 0.011592 56581 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.582 41.282 3979200000 1033200000 2246300000 63530000 0 0 45385000 36334000 29041000 27929000 41457000 103340000 96634000 39619000 70426000 145980000 39226 1193 35004 327106;327107;327108;327109;327110;327111;327112;327113;327114;327115;327116;327117;327118 259013;259014;259015;259016;259017;259018 259016 5 NVSNDPDVIK Unmodified 1099.551 0.55095274 3719 Q969J3 LOH12CR1 Loss of heterozygosity 12 chromosomal region 1 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 29.717 29.896 2 0.030285 32661 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 43.083 33.869 38252000 0 0 0 1969600 2459800 3166700 3259400 2868900 3182900 2819400 5188300 5738400 0 3061300 4537200 39227 3719 35005 327119;327120;327121;327122;327123;327124;327125;327126;327127;327128;327129 259019;259020;259021;259022;259023 259019 5 NVSQENMCSASAAFK Unmodified 1642.7079 0.70794044 2800 Q5THK1 PRR14L Protein PRR14L yes yes 0 0 0 By MS/MS 2 0 1 1 53.127 47.335 2 0.00043003 61421 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.839 82.271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39228 2800 35006 327130 259024 259024 1 NVSQESLETK Unmodified 1133.5564 0.55643205 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21.458 20.992 2 0.0016808 20780 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 103.55 90.169 247770000 5442300 17523000 0 14212000 13250000 18212000 17882000 13914000 12047000 19580000 21645000 27404000 22604000 18635000 25417000 39229 2804 35007 327131;327132;327133;327134;327135;327136;327137;327138;327139;327140;327141;327142;327143;327144 259025;259026;259027;259028;259029;259030;259031;259032;259033;259034;259035;259036;259037;259038 259033 14 NVSQSQMAK Unmodified 991.47568 0.4756793 1826 P61011 SRP54 Signal recognition particle 54 kDa protein yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 7.7544 7.884 2 0.024551 6023 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 86.205 25.616 297780000 0 0 0 12605000 10734000 14492000 0 22184000 20639000 15946000 84068000 0 15333000 37806000 63974000 39230 1826 35008 327145;327146;327147;327148;327149;327150;327151;327152;327153;327154 259039;259040 259040 0 NVSSFPDDATSPLQENR Unmodified 1875.8599 0.85988429 1682 P52292 KPNA2 Importin subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.328 64.419 2 0.00055844 73495 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 71.976 66.563 421180000 0 0 0 23320000 22275000 46561000 24798000 22008000 25443000 42608000 36131000 54041000 39841000 33401000 50751000 39231 1682 35009 327155;327156;327157;327158;327159;327160;327161;327162;327163;327164;327165;327166 259041;259042;259043;259044;259045;259046;259047;259048;259049;259050 259048 10 NVSTGDVNVEMNAAPGVDLTQLLNNMR 2 Oxidation (M) 2903.3753 0.37531992 72 CON__P13645;P13645 KRT10 Keratin, type I cytoskeletal 10 yes no 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 2 1 2 2 88.568 88.638 2;3 1.2289E-173 102689 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 185.02 179.56 + 3272400000 0 0 0 270260000 180820000 137840000 74808000 198480000 96957000 914820000 541640000 339950000 6592700 190970000 319290000 39232 72 35010 327167;327168;327169;327170;327171;327172;327173;327174;327175;327176;327177;327178;327179;327180;327181;327182;327183;327184;327185;327186;327187;327188;327189 259051;259052;259053;259054;259055;259056;259057;259058;259059;259060;259061;259062;259063 259054 90;91 11 NVSTGDVNVEMNAAPGVDLTQLLNNMR Oxidation (M) 2887.3804 0.3804053 72 CON__P13645;P13645 KRT10 Keratin, type I cytoskeletal 10 yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 2 1 2 1 1 93.537 93.502 3 4.4775E-11 110883 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.807 45.333 + 63955000 0 0 0 39058000 1280400 0 0 0 0 18792000 0 1715900 0 0 3108300 39233 72 35010 327190;327191;327192;327193;327194;327195;327196 259064;259065;259066;259067 259066 90;91 4 NVSTGDVNVEMNAAPGVDLTQLLNNMR Unmodified 2871.3855 0.38549067 72 CON__P13645;P13645 KRT10 Keratin, type I cytoskeletal 10 yes no 0 0 0 By MS/MS 10 0 1 1 97.108 96.896 3 6.0379E-21 112361 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 47.38 40.946 + 4952300 0 0 0 4952300 0 0 0 0 0 0 0 0 0 0 0 39234 72 35010 327197 259068 259068 1 NVSTGSAENEEK Unmodified 1263.5579 0.55788861 391 O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.8756 8.0025 2 0.0004063 5482 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.096 81.944 57866000 0 0 0 1468900 1033600 2437300 2715900 2228700 2470500 5205100 13272000 9129200 3875200 5723800 8305200 39235 391 35011 327198;327199;327200;327201;327202;327203;327204;327205;327206;327207;327208;327209 259069;259070;259071;259072;259073;259074;259075 259071 7 NVTAIQGPGGK Unmodified 1040.5615 0.56145784 1615 P50213 IDH3A Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 25.794 26.016 2 0.0008681 28061 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 76.679 61.528 64383000 0 0 0 0 3581400 9590100 5703000 0 3730900 10392000 5617200 12043000 0 0 13726000 39236 1615 35012 327210;327211;327212;327213;327214;327215;327216;327217;327218;327219;327220 259076;259077;259078;259079;259080;259081;259082;259083;259084;259085;259086;259087 259076 12 NVTDSLRESEIDK Unmodified 1504.7369 0.73691561 4222 Q9BXB4 OSBPL11 Oxysterol-binding protein-related protein 11 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 43.406 43.572 3 0.0017554 48282 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.112 36.152 182590000 0 0 0 9985600 8271300 12702000 12560000 19587000 11213000 16480000 25256000 18723000 15318000 0 32491000 39237 4222 35013 327221;327222;327223;327224;327225;327226;327227;327228;327229;327230;327231 259088;259089;259090;259091;259092;259093;259094;259095;259096 259095 8 NVTDVVNTCHDAGISK Unmodified 1728.8101 0.81009732 5168 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 8.5 3.08 4 1 21 3 2 2 2 1 2 2 2 2 2 2 1 1 2 44.761 43.976 2;3 3.4683E-66 56747 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 190.57 172.38 2585700000 0 1774700000 24792000 45413000 56955000 57633000 79408000 61542000 59383000 73018000 70605000 68901000 42165000 45964000 125150000 39238 5168 35014 327232;327233;327234;327235;327236;327237;327238;327239;327240;327241;327242;327243;327244;327245;327246;327247;327248;327249;327250;327251;327252;327253;327254;327255;327256;327257 259097;259098;259099;259100;259101;259102;259103;259104;259105;259106;259107;259108;259109;259110;259111;259112;259113;259114 259102 16 NVTELNEPLSNEER Unmodified 1642.7798 0.77984305 1869 P61981 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 52.086 51.45 2 3.6307E-117 57163 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 207.95 174.76 887660000 0 146820000 0 21236000 24541000 38791000 36355000 18673000 19094000 34502000 91787000 93078000 32323000 87691000 242770000 39239 1869 35015 327258;327259;327260;327261;327262;327263;327264;327265;327266;327267;327268;327269;327270;327271 259115;259116;259117;259118;259119;259120;259121;259122;259123;259124;259125;259126;259127;259128 259119 14 NVTELNEPLSNEERNLLSVAYK Unmodified 2531.2867 0.28674613 1869 P61981 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 6 2 1 5 2 90.726 86.825 2;3 1.5895E-94 109981 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 164.98 155.38 1795800000 5047900 1651500000 139210000 0 0 0 0 0 0 0 0 0 0 0 0 39240 1869 35016 327272;327273;327274;327275;327276;327277;327278;327279 259129;259130;259131;259132;259133;259134;259135;259136;259137;259138;259139;259140;259141;259142 259132 13 NVTGHYISPFHDIPLK Unmodified 1836.9523 0.95226853 4374 Q9H2U2 PPA2 Inorganic pyrophosphatase 2, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 82.737 74.606 4 0.026022 97588 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 32.341 21.553 10180000 10180000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39241 4374 35017 327280 259143 259143 1 NVTICPNPEDTCDFAR Unmodified 1907.8142 0.81419642 413 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 67.716 67.209 2 0.0021755 77532 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 48.741 44.978 1140500 0 0 0 0 1140500 0 0 0 0 0 0 0 0 0 0 39242 413 35018 327281;327282 259144;259145 259145 2 NVTLNPDPNEIK Unmodified 1352.6936 0.69359423 2356 Q13907 IDI1 Isopentenyl-diphosphate Delta-isomerase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.88 4.04 1 2 5 2 1 1 1 1 1 1 62.346 61.486 2 2.0842E-05 71211 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 108.43 89.651 1665400000 54938000 1488000000 0 0 0 2820500 0 0 0 0 25823000 21873000 0 17156000 54823000 39243 2356 35019 327283;327284;327285;327286;327287;327288;327289;327290 259146;259147;259148;259149;259150;259151;259152;259153;259154 259150 9 NVTLPAVFK Unmodified 987.57532 0.57531699 1377 P36578 RPL4 60S ribosomal protein L4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.418 77.475 2 0.0078297 89503 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 71.379 55.332 741170000 0 0 0 35622000 45731000 45063000 42001000 51808000 42527000 74719000 62953000 102560000 68784000 79754000 89642000 39244 1377 35020 327291;327292;327293;327294;327295;327296;327297;327298;327299;327300;327301;327302 259155;259156;259157;259158;259159;259160 259160 6 NVTMETE Unmodified 822.34293 0.3429338 1576 P49458 SRP9 Signal recognition particle 9 kDa protein yes yes 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.581 22.787 1 3.6021E-10 22556 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 192.28 183.6 103400000 0 0 0 3736800 3643500 7553400 5615700 6570100 3847700 8686900 13067000 15409000 8040000 8603400 18628000 39245 1576 35021 327303;327304;327305;327306;327307;327308;327309;327310;327311;327312;327313;327314 259161;259162 259162 0 NVTNNFDERPISVGGNK Unmodified 1859.9126 0.91258856 4709 Q9NWZ3 IRAK4 Interleukin-1 receptor-associated kinase 4 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 55.786 50.927 3 0.0016097 63490 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 71.594 62.31 26307000 0 13375000 12932000 0 0 0 0 0 0 0 0 0 0 0 0 39246 4709 35022 327315;327316 259163;259164 259164 1 NVTNNLK Unmodified 801.43447 0.43446642 1957;831 P06753;P67936 TPM3;TPM4 Tropomyosin alpha-3 chain;Tropomyosin alpha-4 chain no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 11.094 11.237 2 0.025671 8999 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 80.294 42.686 278590000 0 0 0 13691000 7664900 7816900 11211000 10575000 6853900 13454000 32993000 35299000 21025000 34201000 83804000 39247 831;1957 35023 327317;327318;327319;327320;327321;327322;327323;327324;327325;327326;327327;327328 259165;259166;259167 259167 3 NVTPNSYAEPLAAPGGGER Unmodified 1898.9123 0.91225421 4741 Q9NYD6 HOXC10 Homeobox protein Hox-C10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 60.008 60.163 2 6.9391E-06 68423 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 78.763 72.73 28791000 0 0 0 0 3788200 0 3879000 3277000 0 0 6850400 0 0 4669500 6326500 39248 4741 35024 327329;327330;327331;327332;327333;327334 259168;259169;259170;259171;259172;259173 259168 6 NVTQIEPFCLETDRR Unmodified 1876.9101 0.91014572 5009 Q9ULW0 TPX2 Targeting protein for Xklp2 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 72.978 73.169 3 0.0041038 84244 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 36.392 26.053 65698000 0 0 0 0 0 7341000 0 4378500 8088600 0 0 13225000 0 12375000 20290000 39249 5009 35025 327335;327336;327337;327338;327339;327340 259174;259175;259176;259177 259177 4 NVTSEEILK Unmodified 1031.5499 0.5498901 4303 Q9GZS1 POLR1E DNA-directed RNA polymerase I subunit RPA49 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 41.923 41.962 2 0.0099602 47149 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 65.224 44.704 94296000 0 0 0 11078000 7869000 11765000 8976800 8842600 7455000 11617000 12658000 0 14033000 0 0 39250 4303 35026 327341;327342;327343;327344;327345;327346;327347;327348;327349 259178;259179;259180 259178 3 NVTSWFTSK Unmodified 1068.524 0.52400971 276 O15357 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 67.927 67.379 2 0.015207 77504 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 57.59 48.644 106530000 25183000 0 0 3677600 3560400 7451900 5939500 5259600 6802900 6827100 5242800 8936100 6428400 8839100 12378000 39251 276 35027 327350;327351;327352;327353;327354;327355;327356;327357;327358;327359;327360;327361;327362 259181;259182 259182 2 NVTVTQTPSSGDWGLPNSK Unmodified 1986.9647 0.96468371 5292 Q9Y6Q9 NCOA3 Nuclear receptor coactivator 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 69.996 70.029 2 1.6551E-07 79933 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.531 95.664 33246000 0 0 0 2182200 2701100 2943900 3309300 0 0 4606500 0 4027300 3555600 3861100 6059100 39252 5292 35028 327363;327364;327365;327366;327367;327368;327369;327370;327371 259183;259184;259185;259186;259187;259188;259189;259190 259186 8 NVVAVGTGGR Unmodified 928.50903 0.50902834 3723 Q969S3 ZNF622 Zinc finger protein 622 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.594 23.799 2 0.026327 23870 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.318 19.686 95081000 0 0 0 5077900 4972000 6244500 5003200 5166300 3566800 8104800 12522000 12835000 11249000 7458900 12881000 39253 3723 35029 327372;327373;327374;327375;327376;327377;327378;327379;327380;327381;327382;327383 259191;259192 259191 2 NVVGIDLDTAK Unmodified 1143.6136 0.61355299 5193 Q9Y4C1 KDM3A Lysine-specific demethylase 3A yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 61.965 62.141 2 0.0015064 70329 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.275 37.712 109930000 0 0 0 0 10278000 10188000 0 11107000 7592700 13083000 12741000 11744000 11444000 9001000 12746000 39254 5193 35030 327384;327385;327386;327387;327388;327389;327390;327391;327392;327393 259193;259194;259195;259196;259197 259193 4 NVVHELR Unmodified 865.477 0.47699993 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 16.029 16.205 2 0.032282 15801 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 73.039 18.514 116740000 0 0 0 4308500 4106800 5101900 5328800 0 0 8377900 10188000 25555000 10659000 16847000 26269000 39255 2392 35031 327394;327395;327396;327397;327398;327399;327400;327401;327402;327403 259198 259198 1 NVVLPTETEVAPAK Unmodified 1466.7981 0.7980593 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.28 3.87 2 3 1 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 69.607 68.754 2 1.3757E-12 72106 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 112.15 86.105 2477700000 38991000 1626000000 2297600 45465000 46327000 47131000 47455000 43161000 38214000 63009000 99213000 99998000 68026000 80105000 132270000 39256 1226 35032 327404;327405;327406;327407;327408;327409;327410;327411;327412;327413;327414;327415;327416;327417;327418;327419;327420;327421 259199;259200;259201;259202;259203;259204;259205;259206;259207;259208;259209;259210;259211;259212;259213;259214;259215;259216;259217;259218 259204 19 NVVLQYGFK Unmodified 1066.5811 0.58113065 3331 Q8N4J0 C9orf41 UPF0586 protein C9orf41 yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 73.293 67.587 2 0.0073818 88801 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.352 79.208 43971000 42055000 0 1916700 0 0 0 0 0 0 0 0 0 0 0 0 39257 3331 35033 327422;327423 259219 259219 1 NVVMVNQGLTK Unmodified 1201.6489 0.64889264 1003 P14635 CCNB1 G2/mitotic-specific cyclin-B1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 48.719 47.9 2 0.00045337 61601 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.98 67.682 143750000 0 126010000 0 0 0 3086900 0 0 0 4238300 0 4158100 0 0 6258500 39258 1003 35034 327424;327425;327426;327427;327428 259220;259221;259222;259223 259222 4 NVVMVNQGLTK Oxidation (M) 1217.6438 0.64380726 1003 P14635 CCNB1 G2/mitotic-specific cyclin-B1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 40.303 39.877 2 0.0052423 44038 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 52.725 42.015 59665000 0 31137000 0 0 0 0 0 4334600 4307800 6004500 0 6513100 0 3075600 4292800 39259 1003 35034 327429;327430;327431;327432;327433;327434;327435;327436 259224;259225;259226;259227;259228;259229;259230 259229 1368 7 NVVNLGNLVIESK Unmodified 1397.7878 0.78782897 5052 Q9UPN9 TRIM33 E3 ubiquitin-protein ligase TRIM33 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 82.626 81.509 2 5.8408E-21 101713 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.75 91.442 393210000 15912000 172770000 3732500 3773200 8430600 24534000 8882100 15306000 14548000 23253000 18027000 19384000 12061000 17919000 34670000 39260 5052 35035 327437;327438;327439;327440;327441;327442;327443;327444;327445;327446;327447;327448;327449;327450;327451;327452 259231;259232;259233;259234;259235;259236;259237;259238;259239;259240;259241;259242;259243;259244;259245;259246;259247 259234 17 NVVQSEAR Unmodified 901.46174 0.4617438 3361 Q8N6R0 METTL13 Methyltransferase-like protein 13 yes yes 0 0 0 By MS/MS 10 0 1 1 8.5578 8.9168 2 0.025168 7078 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 58.917 35.06 6176800 0 0 0 0 0 0 0 0 0 0 6176800 0 0 0 0 39261 3361 35036 327453 259248 259248 1 NVVTTLLNAGGEK Unmodified 1314.7143 0.71432967 3105 Q7Z589 EMSY Protein EMSY yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 83.304 78.645 2 3.8634E-05 100206 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 114.89 84.639 52606000 26982000 22838000 2786300 0 0 0 0 0 0 0 0 0 0 0 0 39262 3105 35037 327454;327455;327456;327457 259249;259250;259251;259252 259251 4 NVVVVDGVR Unmodified 955.54508 0.5450795 1757 P55084 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 15.429 15.8 2 0.027554 14565 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.358 1.5099 52613000 0 0 0 0 0 0 0 0 0 0 0 0 0 26081000 26532000 39263 1757 35038 327458;327459 259253 259253 1 NVVYRDLK Unmodified 1005.5607 0.56072956 1304 P31749 AKT1 RAC-alpha serine/threonine-protein kinase yes yes 0 0 1 By MS/MS 2 0 1 1 32.775 26.739 2 0.01502 37492 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 123.98 78.011 45176000 45176000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39264 1304 35039 327460 259254 259254 1 NVYATTVGTPYK Unmodified 1312.6663 0.66631685 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 47.9 47.63 2 7.3869E-07 60552 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.78 107.46 148310000 0 40769000 0 5852500 5458400 6398400 7778600 7411000 6095300 10473000 12881000 15353000 8744600 7140500 13951000 39265 2291 35040 327461;327462;327463;327464;327465;327466;327467;327468;327469;327470;327471;327472;327473;327474 259255;259256;259257;259258;259259;259260;259261;259262;259263;259264;259265;259266;259267 259258 13 NVYMLATTVSSK Oxidation (M) 1328.6646 0.66460229 2943 Q6PCE3 PGM2L1 Glucose 1,6-bisphosphate synthase yes yes 0 1 0 By MS/MS 2 0 1 1 66.156 57.861 2 0.018078 77695 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.486 41.91 8306300 8306300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39266 2943 35041 327475 259268 259268 4577 1 NVYMLATTVSSK Unmodified 1312.6697 0.66968766 2943 Q6PCE3 PGM2L1 Glucose 1,6-bisphosphate synthase yes yes 0 0 0 By MS/MS 2 0 1 1 73.719 65.523 2 0.004285 86725 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.744 62.536 20314000 20314000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39267 2943 35041 327476 259269;259270 259270 2 NVYNSSIGVQSDEIDLSDVLSGNGK Unmodified 2609.2457 0.24566918 4584 Q9NR09 BIRC6 Baculoviral IAP repeat-containing protein 6 yes yes 0 0 0 By MS/MS 3 0 1 1 90.284 87.07 3 0.044518 104215 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 18.101 15.3 4787700 0 4787700 0 0 0 0 0 0 0 0 0 0 0 0 0 39268 4584 35042 327477 259271 259271 1 NVYSANQK Unmodified 922.45084 0.45084476 4020 Q99541 PLIN2 Perilipin-2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 9.058 5.7514 2 0.01195 8694 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.67 88.111 60568000 0 60568000 0 0 0 0 0 0 0 0 0 0 0 0 0 39269 4020 35043 327478;327479 259272 259272 1 NWADVQSQLR Unmodified 1215.5996 0.59963426 2537 Q15437 SEC23B Protein transport protein Sec23B yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 59.655 60.048 2 0.0062946 67771 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.221 61.071 10747000 0 0 0 0 0 0 0 0 0 0 0 0 0 2204200 8542700 39270 2537 35044 327480;327481 259273;259274 259273 2 NWATLAQK Unmodified 930.49232 0.49231565 1096 P19838 NFKB1 Nuclear factor NF-kappa-B p105 subunit;Nuclear factor NF-kappa-B p50 subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 50.342 44.467 2 0.029412 61252 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.774 33.708 53079000 27593000 22281000 3204200 0 0 0 0 0 0 0 0 0 0 0 0 39271 1096 35045 327482;327483;327484 259275 259275 1 NWEAMEALASTEK Unmodified 1478.6711 0.67114423 3151 Q86UP2 KTN1 Kinectin yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 81.644 76.939 2 0.0036467 95720 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.24 62.681 22108000 0 22108000 0 0 0 0 0 0 0 0 0 0 0 0 0 39272 3151 35046 327485;327486 259276;259277 259276 2 NWGAVVRSPEGTPQK Unmodified 1624.8322 0.8321534 3182 Q86WB0 ZC3HC1 Nuclear-interacting partner of ALK yes yes 0 0 1 By MS/MS 2 0 1 1 55.991 47.844 3 0.0064824 65252 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.408 36.244 56150000 56150000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39273 3182 35047 327487 259278 259278 1 NWGLSVYADKPETTK Unmodified 1707.8468 0.84680041 760 P02763 ORM1 Alpha-1-acid glycoprotein 1 yes yes 0 0 1 By MS/MS By matching 10 0 2 1 1 64.191 63.935 3 0.027568 74084 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 32.152 23.975 6489900 0 0 0 4293000 0 0 0 2196900 0 0 0 0 0 0 0 39274 760 35048 327488;327489 259279 259279 0 NWLSADTK Unmodified 933.4556 0.45559579 4577 Q9NQW6 ANLN Actin-binding protein anillin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 43.256 42.929 2 0.041805 48357 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 49.833 28.679 16826000 0 0 0 4951000 6046700 5828600 0 0 0 0 0 0 0 0 0 39275 4577 35049 327490;327491;327492 259280 259280 1 NWMFSNAK Unmodified 996.44874 0.44873627 3249 Q8IWX8 CHERP Calcium homeostasis endoplasmic reticulum protein yes yes 0 0 0 By MS/MS 2 0 1 1 67.367 59.073 2 0.026263 79249 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 127.12 70.607 33262000 33262000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39276 3249 35050 327493 259281 259281 0 NWPSDEMPDFPK Oxidation (M) 1477.6184 0.61838038 2146 Q07960 ARHGAP1 Rho GTPase-activating protein 1 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 70.664 65.484 2 0.0012705 83929 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.149 78.617 54057000 0 54057000 0 0 0 0 0 0 0 0 0 0 0 0 0 39277 2146 35051 327494;327495 259282;259283;259284 259284 3453 3 NWPSDEMPDFPK Unmodified 1461.6235 0.62346575 2146 Q07960 ARHGAP1 Rho GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 4 3.46 3 1 1 1 1 1 82.143 78.519 2 0.0072177 97179 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.806 78.026 148730000 0 146150000 2584300 0 0 0 0 0 0 0 0 0 0 0 0 39278 2146 35051 327496;327497;327498;327499 259285;259286;259287;259288 259285 4 NWQYQETIK Unmodified 1208.5826 0.58258722 2471 Q15008 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 50.249 49.379 2 0.0020794 55655 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 139.97 119.41 635860000 0 333200000 7042700 22441000 27479000 32079000 11011000 0 0 52250000 58730000 61855000 0 0 29771000 39279 2471 35052 327500;327501;327502;327503;327504;327505;327506;327507;327508;327509;327510 259289;259290;259291;259292;259293;259294;259295;259296;259297;259298;259299;259300;259301;259302;259303;259304 259298 16 NWTEDMEGGISSPVK Oxidation (M) 1664.7352 0.73520105 869 P08651 NFIC Nuclear factor 1 C-type yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.7 56.821 2 2.1868E-23 63672 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 122.7 108.01 221740000 0 0 0 11843000 13198000 13122000 17589000 12556000 19425000 20746000 27084000 23489000 20035000 19336000 23315000 39280 869 35053 327511;327512;327513;327514;327515;327516;327517;327518;327519;327520;327521;327522 259305;259306;259307;259308;259309;259310;259311;259312;259313;259314;259315;259316 259312 1114 12 NWTEDMEGGISSPVK Unmodified 1648.7403 0.74028643 869 P08651 NFIC Nuclear factor 1 C-type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 72.741 72.803 2 4.5486E-148 83018 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 213.16 201.29 375550000 0 0 0 12255000 17816000 0 0 30496000 27481000 43278000 44367000 35809000 24848000 37879000 101330000 39281 869 35053 327523;327524;327525;327526;327527;327528;327529;327530;327531;327532 259317;259318;259319;259320;259321;259322;259323;259324;259325;259326;259327 259323 11 NWVQTLRPVSAK Unmodified 1397.7779 0.77793298 1243 P29144 TPP2 Tripeptidyl-peptidase 2 yes yes 0 0 1 By matching By MS/MS By MS/MS 10 0 3 1 1 1 59.88 60.266 3 0.035039 67740 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 23.092 9.6787 16557000 0 0 0 0 0 0 0 0 0 0 1916300 0 0 4049400 10592000 39282 1243 35054 327533;327534;327535 259328 259328 1 NYAAALETFTEGQK Unmodified 1541.7362 0.73618733 5131 Q9Y2Z0 SUGT1 Suppressor of G2 allele of SKP1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.11 3.8 6 1 12 1 4 2 1 1 1 1 1 1 1 1 1 1 1 1 78.403 76.825 2;3 9.3215E-44 94930 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 212.28 188.05 1379700000 20492000 903540000 29498000 10296000 16665000 28763000 29628000 26595000 26391000 41501000 45654000 54820000 22601000 30568000 92683000 39283 5131 35055 327536;327537;327538;327539;327540;327541;327542;327543;327544;327545;327546;327547;327548;327549;327550;327551;327552;327553;327554 259329;259330;259331;259332;259333;259334;259335;259336;259337;259338;259339;259340;259341;259342;259343;259344;259345;259346;259347;259348 259332 20 NYAELTIMK Oxidation (M) 1097.5427 0.54269624 3094 Q7Z460 CLASP1 CLIP-associating protein 1 yes yes 0 1 0 By MS/MS 10 0 1 1 49.731 49.79 2 0.051892 56294 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 53.775 37.104 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39284 3094 35056 327555 259349 259349 1 NYAELTIMK Unmodified 1081.5478 0.54778161 3094 Q7Z460 CLASP1 CLIP-associating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 65.419 64.986 2 0.023396 83488 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.23 58.582 39767000 0 9712000 0 0 2785700 2663700 0 2896500 2939900 3396700 3175600 5586800 3081400 0 3529000 39285 3094 35056 327556;327557;327558;327559;327560;327561;327562;327563;327564;327565 259350;259351 259350 2 NYAFEIPDVPEK Unmodified 1420.6874 0.68744622 895 P09884 POLA1 DNA polymerase alpha catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 81.05 79.929 2 3.1117E-14 98879 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.48 127.29 719620000 13587000 487140000 5655400 6942400 9850500 18968000 11890000 14002000 11668000 21398000 22154000 25756000 14947000 21771000 33890000 39286 895 35057 327566;327567;327568;327569;327570;327571;327572;327573;327574;327575;327576;327577;327578;327579;327580;327581 259352;259353;259354;259355;259356;259357;259358;259359;259360;259361;259362;259363;259364;259365;259366;259367;259368 259355 16 NYAGEEEEEGSGSSEGFDPPATDR Unmodified 2529.0052 0.0051641351 1044 P16989 YBX3 Y-box-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 50.24 50.567 2;3 2.1183E-75 57272 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 178.12 171.39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39287 1044 35058 327582;327583;327584;327585 259369;259370;259371;259372 259371 4 NYAQVFNK Unmodified 982.48723 0.48723027 5280 Q9Y6E2 BZW2 Basic leucine zipper and W2 domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.075 40.255 2 0.0048481 44779 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 109.11 94.525 531900000 0 0 0 29216000 30150000 46358000 38487000 34328000 26443000 55376000 49810000 54648000 49453000 51893000 65740000 39288 5280 35059 327586;327587;327588;327589;327590;327591;327592;327593;327594;327595;327596;327597 259373;259374;259375;259376;259377;259378;259379;259380;259381;259382;259383;259384;259385;259386;259387;259388 259379 14 NYCDPQGHPSTGLK Unmodified 1572.6991 0.69909031 448 O60934 NBN Nibrin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 27.061 26.207 3 0.00068082 33598 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 52.527 48.665 150230000 0 119690000 0 0 2477300 4165100 2629100 0 3506600 3595600 5674900 0 0 0 8490800 39289 448 35060 327598;327599;327600;327601;327602;327603;327604;327605;327606 259389;259390;259391 259389 3 NYCNIQVTK Unmodified 1138.5441 0.54409322 1538 P48444 ARCN1 Coatomer subunit delta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 35.341 34.406 2 0.0037735 37563 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 96.311 58.703 707930000 11295000 447360000 0 10559000 7478000 23965000 13427000 13106000 10694000 19709000 37256000 27078000 18364000 22599000 45043000 39290 1538 35061 327607;327608;327609;327610;327611;327612;327613;327614;327615;327616;327617;327618;327619;327620;327621 259392;259393;259394;259395;259396;259397;259398;259399;259400;259401;259402 259401 10 NYDESGSPR Unmodified 1023.4258 0.42575222 1838 P61201 COPS2 COP9 signalosome complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 8.5216 8.6446 2 0.0080246 6241 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 70.816 59.747 76092000 0 0 0 3433900 6095400 9411600 6643600 7438500 6438100 3885500 15239000 0 7117700 4756500 5631600 39291 1838 35062 327622;327623;327624;327625;327626;327627;327628;327629;327630;327631;327632 259403 259403 1 NYDESGSPRR Unmodified 1179.5269 0.52686325 1838 P61201 COPS2 COP9 signalosome complex subunit 2 yes yes 0 0 1 By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 2 6.8545 6.9912 3 0.00085893 4429 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.657 62.216 77156000 0 0 0 4236400 2620400 3833600 3312700 5417900 3415500 0 11373000 5924200 10990000 9139000 16893000 39292 1838 35063 327633;327634;327635;327636;327637;327638;327639;327640;327641;327642;327643;327644 259404;259405;259406 259405 3 NYDESGSPRRTTCLK Unmodified 1782.8319 0.8318954 1838 P61201 COPS2 COP9 signalosome complex subunit 2 yes yes 0 0 2 By MS/MS 2 0 2 2 23.221 18.325 3;4 0.013624 26095 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.813 34.255 158630000 158630000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39293 1838 35064 327645;327646 259407;259408 259408 1 NYDGDVQSDSVAQGYGSLGMMTSVLVCPDGK Oxidation (M) 3265.4213 0.42134341 552 O75874 IDH1 Isocitrate dehydrogenase [NADP] cytoplasmic yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 91.91 86.739 3 1.4186E-67 108826 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.94 115.86 148130000 14929000 124610000 8590700 0 0 0 0 0 0 0 0 0 0 0 0 39294 552 35065 327647;327648;327649 259409;259410;259411;259412 259410 716;717 4 NYDGDVQSDSVAQGYGSLGMMTSVLVCPDGK Unmodified 3249.4264 0.42642879 552 O75874 IDH1 Isocitrate dehydrogenase [NADP] cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS 2.6 0.49 2 3 1 4 95.665 91.734 3 2.023E-104 113351 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.09 137.62 199260000 4002600 195260000 0 0 0 0 0 0 0 0 0 0 0 0 0 39295 552 35065 327650;327651;327652;327653;327654 259413;259414;259415;259416;259417 259413 4 NYDGDVQSDSVAQGYGSLGMMTSVLVCPDGK 2 Oxidation (M) 3281.4163 0.41625803 552 O75874 IDH1 Isocitrate dehydrogenase [NADP] cytoplasmic yes yes 0 2 0 By MS/MS By MS/MS 3 0 2 1 1 81.772 78.259 3 3.4949E-16 94083 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 71.118 70.526 17635000 1429900 16205000 0 0 0 0 0 0 0 0 0 0 0 0 0 39296 552 35065 327655;327656 259418 259418 716;717 1 NYDIGAALDTIQYSK Unmodified 1670.8152 0.81516593 2303 Q13501 SQSTM1 Sequestosome-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 83.487 82.156 2;3 5.5465E-50 101403 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 196.38 178.91 1181100000 8860000 685670000 7688900 6596000 27017000 31391000 22076000 27331000 24587000 60307000 43965000 53388000 32334000 43581000 106300000 39297 2303 35066 327657;327658;327659;327660;327661;327662;327663;327664;327665;327666;327667;327668;327669;327670;327671;327672;327673 259419;259420;259421;259422;259423;259424;259425;259426;259427;259428;259429;259430;259431;259432;259433;259434;259435;259436;259437;259438;259439 259424 21 NYDYYASRVPESIK Unmodified 1703.8155 0.81550028 701 O95861 BPNT1 3'(2'),5'-bisphosphate nucleotidase 1 yes yes 0 0 1 By MS/MS 10 0 1 1 58.778 59.371 3 0.0098563 66910 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.964 38.989 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39298 701 35067 327674 259440 259440 1 NYEDEDSLK Unmodified 1111.4669 0.46694834 946 P11388 TOP2A DNA topoisomerase 2-alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 23.707 23.996 2 0.050085 25430 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 42.109 23.327 18237000 0 0 0 0 0 1720100 0 1580200 1015000 2782000 1953800 3782200 3041400 2361900 0 39299 946 35068 327675;327676;327677;327678;327679;327680;327681;327682 259441 259441 1 NYEEIAK Unmodified 865.41815 0.41814765 1595 P49755 TMED10 Transmembrane emp24 domain-containing protein 10 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 14 2 1 1 1 2 1 1 1 1 1 1 1 21.515 21.691 2 0.025135 22454 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 81.381 45.196 750480000 0 0 0 37613000 31286000 52461000 51304000 88961000 37941000 56553000 72541000 95510000 70554000 67004000 88758000 39300 1595 35069 327683;327684;327685;327686;327687;327688;327689;327690;327691;327692;327693;327694;327695;327696 259442;259443;259444;259445;259446 259442 5 NYEIERTIVQLENEIYQIK Unmodified 2394.2431 0.2430904 560 O75934 BCAS2 Pre-mRNA-splicing factor SPF27 yes yes 0 0 1 By MS/MS 3 0 1 1 99.322 95.971 3 2.3255E-10 115042 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 78.661 75.067 3945300 0 3945300 0 0 0 0 0 0 0 0 0 0 0 0 0 39301 560 35070 327697 259447 259447 1 NYEREVDRNQELLTR Unmodified 1933.9606 0.96060139 5278 Q9Y6D9 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes yes 0 0 2 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 40.709 41.127 3 0.030431 44799 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.312 26.216 51599000 0 0 0 0 0 3492900 0 0 5450000 0 0 14095000 0 0 28561000 39302 5278 35071 327698;327699;327700;327701 259448 259448 1 NYEYLIR Unmodified 969.49198 0.4919813 4089 Q9BQ70 TCF25 Transcription factor 25 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.888 56.014 2 0.023433 63652 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 85.359 40.939 88017000 0 0 0 4415900 5818800 6500400 5233500 8842300 3110900 9041900 8905000 7878800 7010600 7174300 14085000 39303 4089 35072 327702;327703;327704;327705;327706;327707;327708;327709;327710;327711;327712;327713 259449;259450 259449 2 NYFDFDLECETVDQAVETYGLQK Unmodified 2783.2272 0.22724192 465 O75153 CLUH Clustered mitochondria protein homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 2 1 1 1 1 97.065 92.437 3 0.00028911 112229 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 55.127 54.142 22867000 16367000 4570100 1929900 0 0 0 0 0 0 0 0 0 0 0 0 39304 465 35073 327714;327715;327716 259451;259452;259453 259451 3 NYFDGEGK Unmodified 928.39266 0.39266118 2072 Q02241 KIF23 Kinesin-like protein KIF23 yes yes 0 0 0 By MS/MS 2 0 1 1 29.141 24.793 2 0.030627 32524 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.738 64.669 35699000 0 35699000 0 0 0 0 0 0 0 0 0 0 0 0 0 39305 2072 35074 327717 259454 259454 1 NYFENTDILIYVIDSADRK Unmodified 2288.1325 0.13247732 1371 P36405 ARL3 ADP-ribosylation factor-like protein 3 yes yes 0 0 1 By MS/MS 2 0 1 1 99.816 91.686 3 9.5021E-07 118147 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.96 82.973 36727000 36727000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39306 1371 35075 327718 259455 259455 1 NYFGLFPR Unmodified 1012.5131 0.51305109 3542 Q8WUF5 PPP1R13L RelA-associated inhibitor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.369 81.43 2 0.0044555 94092 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 110.61 96.94 195480000 0 0 0 7118100 5915900 18333000 10409000 15380000 18859000 16678000 16327000 19090000 10502000 16049000 40818000 39307 3542 35076 327719;327720;327721;327722;327723;327724;327725;327726;327727;327728;327729;327730 259456;259457;259458;259459;259460;259461;259462;259463;259464;259465;259466;259467;259468 259463 13 NYFLEEDNYK Unmodified 1333.5826 0.5826468 2702 Q53GS9 USP39 U4/U6.U5 tri-snRNP-associated protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 60.298 60.443 2 0.011018 69195 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 54.982 48.086 49689000 0 0 0 0 2612000 4637000 3812900 3910300 4282100 7812800 6773900 0 3864200 5128700 6854700 39308 2702 35077 327731;327732;327733;327734;327735;327736;327737;327738;327739;327740 259469;259470;259471;259472;259473 259472 5 NYFLLSSSMDK Oxidation (M) 1319.6068 0.60675306 2734 Q5JSH3 WDR44 WD repeat-containing protein 44 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 5.25 3.7 3 2 3 2 2 1 1 1 1 71.757 68.73 2 0.0066206 87418 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.1 60.319 239590000 122020000 78646000 25996000 0 0 2180700 0 0 0 0 0 0 0 4428400 6320800 39309 2734 35078 327741;327742;327743;327744;327745;327746;327747;327748 259474;259475;259476;259477;259478;259479;259480 259475 4376 7 NYFLLSSSMDK Unmodified 1303.6118 0.61183843 2734 Q5JSH3 WDR44 WD repeat-containing protein 44 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 5.2 3.92 3 2 1 1 1 1 1 79.862 76.875 2 0.0066712 93849 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 71.614 60.904 293450000 188100000 71523000 15956000 0 0 0 0 1802400 0 0 0 0 0 0 16070000 39310 2734 35078 327749;327750;327751;327752;327753 259481;259482;259483;259484 259484 4 NYGENPEAYNEELK Unmodified 1668.7267 0.72674485 4386 Q9H3S7 PTPN23 Tyrosine-protein phosphatase non-receptor type 23 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 48.882 49.133 2 0.00034423 55666 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 77.305 71.202 37565000 0 0 0 0 0 8887400 8455600 0 0 7260500 0 0 0 0 12961000 39311 4386 35079 327754;327755;327756;327757;327758 259485;259486;259487;259488 259486 4 NYGFVHIEDK Unmodified 1220.5826 0.58258722 4209 Q9BWF3;Q9BQ04 RBM4;RBM4B RNA-binding protein 4;RNA-binding protein 4B yes no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 2 2 1 2 2 1 2 1 2 2 1 2 51.127 51.234 2;3 0.00091204 56600 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 114.86 100.18 273680000 0 0 0 18195000 13268000 17472000 24695000 24597000 14519000 31045000 14830000 14622000 35799000 12912000 51724000 39312 4209 35080 327759;327760;327761;327762;327763;327764;327765;327766;327767;327768;327769;327770;327771;327772;327773;327774;327775;327776;327777;327778 259489;259490;259491;259492;259493;259494;259495;259496;259497;259498;259499;259500;259501;259502 259493 13 NYGILADATEQVGQHK Unmodified 1742.8588 0.85876208 4278 Q9BZZ5 API5 Apoptosis inhibitor 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 25 2 2 2 2 2 2 3 2 2 2 2 2 66.186 66.272 2;3 7.284E-42 75692 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 123.68 115.7 879270000 0 0 0 22955000 35395000 85652000 54931000 61241000 65256000 88060000 88562000 113750000 58632000 73333000 131500000 39313 4278 35081 327779;327780;327781;327782;327783;327784;327785;327786;327787;327788;327789;327790;327791;327792;327793;327794;327795;327796;327797;327798;327799;327800;327801;327802;327803 259503;259504;259505;259506;259507;259508;259509;259510;259511;259512;259513;259514;259515;259516;259517;259518;259519;259520;259521;259522;259523;259524;259525;259526 259513 24 NYGSPLISGSTPK Unmodified 1319.6721 0.67213051 2558 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 52.089 51.739 2 0.00062129 57601 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 84.507 56.299 206950000 0 73024000 0 8566200 7596800 7905200 10973000 10834000 11132000 0 15128000 19440000 11285000 10522000 20545000 39314 2558 35082 327804;327805;327806;327807;327808;327809;327810;327811;327812;327813;327814;327815 259527;259528;259529;259530 259529 4 NYGSYSTQASAAAATAELLK Unmodified 2015.98 0.97999942 220 O14828 SCAMP3 Secretory carrier-associated membrane protein 3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 79.95 80.045 2 2.2486E-15 92700 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 115.82 108.09 36640000 0 0 0 0 2998900 2049700 2118300 0 2149700 5651800 4416700 6122800 2407300 2488000 6237400 39315 220 35083 327816;327817;327818;327819;327820;327821;327822;327823;327824;327825 259531;259532;259533;259534;259535;259536;259537 259537 7 NYHPIVVPGLGR Unmodified 1320.7303 0.73025451 2189 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.851 66.933 3 0.016409 76582 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 38.021 28.533 111380000 0 0 0 4534000 4116100 9734200 6537800 6793300 6643900 10301000 10062000 11290000 9443100 9069800 22858000 39316 2189 35084 327826;327827;327828;327829;327830;327831;327832;327833;327834;327835;327836;327837 259538;259539;259540 259538 3 NYILDQTNVYGSAQR Unmodified 1740.8431 0.84311201 4162 Q9BUJ2 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 1 2 2 2 2 2 1 2 2 2 65.275 65.352 2;3 8.3245E-30 74742 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 172.92 147.54 182200000 0 0 0 8016000 12757000 6920100 16109000 15723000 10084000 21052000 21363000 15206000 14810000 13886000 26278000 39317 4162 35085 327838;327839;327840;327841;327842;327843;327844;327845;327846;327847;327848;327849;327850;327851;327852;327853;327854;327855;327856;327857;327858;327859 259541;259542;259543;259544;259545;259546;259547;259548;259549;259550;259551;259552 259550 12 NYIPYLTK Unmodified 1010.5437 0.54368251 2745 Q5K651 SAMD9 Sterile alpha motif domain-containing protein 9 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 73.649 66.811 2 0.012959 85249 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.523 76.995 35571000 17636000 17935000 0 0 0 0 0 0 0 0 0 0 0 0 0 39318 2745 35086 327860;327861 259553;259554 259553 2 NYIQGINLVQAK Unmodified 1359.751 0.75104953 1703 P52815 MRPL12 39S ribosomal protein L12, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 3 9 2 1 1 1 1 1 1 1 1 1 1 75.179 73.507 2 0.00035323 84857 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 105.1 76.703 256710000 63147000 64483000 0 0 8393400 12677000 11942000 0 10195000 14542000 0 22065000 12142000 13583000 23541000 39319 1703 35087 327862;327863;327864;327865;327866;327867;327868;327869;327870;327871;327872;327873 259555;259556;259557;259558;259559;259560;259561;259562;259563;259564;259565;259566 259556 12 NYIQSLTQMPK Oxidation (M) 1337.6649 0.66493664 2611 Q16539 MAPK14 Mitogen-activated protein kinase 14 yes yes 0 1 0 By MS/MS 10 0 1 1 57.945 58.546 2 0.025761 65911 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.79 33.013 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39320 2611 35088 327874 259567 259567 1 NYITMDELRR Unmodified 1309.6449 0.6448699 971 P12814 ACTN1 Alpha-actinin-1 yes yes 0 0 1 By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 55.307 55.497 3 0.0018346 62583 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 56.548 46.893 120060000 0 0 0 3175500 0 6513800 4494300 0 4696400 6828300 15636000 16785000 4748300 13068000 44110000 39321 971 35089 327875;327876;327877;327878;327879;327880;327881;327882;327883;327884 259568;259569;259570;259571 259571 3 NYIVEDGDIIFFK Unmodified 1571.7872 0.78716026 4636 Q9NTK5 OLA1 Obg-like ATPase 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 88.266 88.316 2 0.0079648 102253 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.518 47.563 1787700 0 0 0 0 0 1787700 0 0 0 0 0 0 0 0 0 39322 4636 35090 327885;327886 259572;259573 259573 2 NYLAPDATAADK Unmodified 1248.5986 0.59863121 4894 Q9UHB7 AFF4 AF4/FMR2 family member 4 yes yes 0 0 0 By MS/MS 2 0 1 1 41.19 36.137 2 0.015275 46854 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.699 42.028 19484000 0 19484000 0 0 0 0 0 0 0 0 0 0 0 0 0 39323 4894 35091 327887 259574 259574 1 NYLHYSLYDQAEK Unmodified 1642.7627 0.76273643 308 O43242 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 1 2 1 1 1 2 2 2 1 1 2 58.562 58.744 2;3 0.0030205 66756 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 37.248 32.548 244610000 0 0 0 7999700 9459200 23907000 4016800 7635000 6734300 38244000 40423000 60679000 5699800 7340900 32468000 39324 308 35092 327888;327889;327890;327891;327892;327893;327894;327895;327896;327897;327898;327899;327900;327901;327902;327903;327904 259575;259576;259577;259578;259579;259580;259581;259582;259583;259584;259585 259576 9 NYLLPAGYSLEEQR Unmodified 1651.8206 0.82058566 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 78.561 78.695 2 2.9181E-16 90563 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 119.45 105.29 68707000 0 0 0 0 0 4785100 3089000 4133800 0 7944600 0 9828900 9363700 8373100 21188000 39325 2203 35093 327905;327906;327907;327908;327909;327910;327911;327912;327913 259586;259587;259588;259589;259590;259591;259592;259593;259594;259595;259596;259597 259589 12 NYLLQCTR Unmodified 1066.523 0.52296385 3961 Q96QK1 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 43.896 43.635 2 0.031681 47682 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 54.776 34.077 13787000 0 0 0 4850800 612590 0 0 0 0 0 0 0 0 8324100 0 39326 3961 35094 327914;327915;327916 259598 259598 1 NYLNFVSPLPDIVGQK Unmodified 1802.9567 0.95668521 5127 Q9Y2X9 ZNF281 Zinc finger protein 281 yes yes 0 0 0 By MS/MS 10 0 1 1 93.097 93.234 2 0.0067451 108034 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.917 22.481 1433600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1433600 39327 5127 35095 327917 259599;259600 259599 2 NYLNQHIEHVQK Unmodified 1521.7688 0.76882486 1238 P28715 ERCC5 DNA repair protein complementing XP-G cells yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching 9 2.65 1 7 1 1 1 1 1 1 1 1 33.185 32.559 3 0.02334 47659 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 39.016 26.85 72629000 34474000 0 0 0 0 6367300 4002500 4840600 3408900 7619000 4300900 0 0 0 7616400 39328 1238 35096 327918;327919;327920;327921;327922;327923;327924;327925 259601;259602;259603 259602 3 NYLPLLEPVKPEPK Unmodified 1635.9236 0.92359416 4822 Q9P2N5 RBM27 RNA-binding protein 27 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79.161 78.284 3 0.00017399 90188 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 79.875 73.146 309220000 39524000 5220900 12324000 13797000 14351000 23259000 16080000 18578000 17765000 24630000 19607000 26065000 24206000 19815000 33997000 39329 4822 35097 327926;327927;327928;327929;327930;327931;327932;327933;327934;327935;327936;327937;327938;327939;327940 259604;259605;259606;259607;259608;259609;259610;259611;259612;259613;259614;259615;259616;259617;259618 259604 14 NYLQSLPSK Unmodified 1048.5553 0.55530983 1215 P27361 MAPK3 Mitogen-activated protein kinase 3 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 49.595 49.535 2 0.0052698 55911 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 78.334 49.185 42155000 0 0 0 0 9051200 16105000 8221200 8777800 0 0 0 0 0 0 0 39330 1215 35098 327941;327942;327943;327944;327945;327946 259619;259620;259621;259622;259623 259622 5 NYLSIFR Unmodified 911.4865 0.48650199 841 P07384 CAPN1 Calpain-1 catalytic subunit yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.903 76.964 2 0.044016 88320 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.993 39.826 26582000 0 0 0 1691800 1220600 1662600 1668600 1749800 1437900 2771700 2325300 3598600 1789800 2104600 4560500 39331 841 35099 327947;327948;327949;327950;327951;327952;327953;327954;327955;327956;327957;327958 259624 259624 1 NYLSPTFK Unmodified 968.49673 0.49673232 4751;4750 Q9NYU2;Q9NYU1 UGGT1;UGGT2 UDP-glucose:glycoprotein glucosyltransferase 1;UDP-glucose:glycoprotein glucosyltransferase 2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54.128 52.956 2 0.0091721 58676 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.753 33.121 933280000 290570000 425860000 19085000 5200300 5444300 25903000 6487900 5953600 0 19333000 27871000 27166000 15854000 10855000 47701000 39332 4751;4750 35100 327959;327960;327961;327962;327963;327964;327965;327966;327967;327968;327969;327970;327971;327972 259625;259626;259627;259628;259629;259630;259631;259632 259627 6 NYLTNLLK Unmodified 977.55458 0.55458155 2328 Q13616 CUL1 Cullin-1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 80.544 79.972 2 0.01212 102892 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.64 66.819 183200000 130100000 0 0 1039800 1027100 6005400 2460000 2998700 2238100 6523000 5459800 4094600 2399500 3796500 15055000 39333 2328 35101 327973;327974;327975;327976;327977;327978;327979;327980;327981;327982;327983;327984;327985 259633;259634;259635 259634 3 NYMAFLDSQTATFSR Oxidation (M) 1766.7934 0.79338463 624 O95163 IKBKAP Elongator complex protein 1 yes yes 0 1 0 By matching By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 77.189 77.322 2 0.00020483 89375 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 82.362 77.263 18202000 0 0 0 0 0 5993200 0 0 0 0 0 4220900 2637300 0 5350900 39334 624 35102 327986;327987;327988;327989 259636;259637 259637 765 0 NYMSNPSYNYEIVNR Oxidation (M) 1878.8207 0.82066201 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 57.452 57.599 2 2.0969E-35 65326 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 154.66 148.62 88994000 0 0 0 0 10680000 11159000 7229900 7616200 0 0 9085000 17129000 13097000 12998000 0 39335 2392 35103 327990;327991;327992;327993;327994;327995;327996;327997;327998;327999;328000;328001 259638;259639;259640;259641;259642;259643;259644;259645;259646;259647;259648;259649;259650 259644 3914 13 NYMSNPSYNYEIVNR Unmodified 1862.8257 0.82574739 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 66.368 66.446 2 5.8125E-42 75544 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 163.78 151.91 77293000 0 0 0 2898000 3287000 6100100 3989000 6329800 0 6007500 7758800 9515900 6472700 6953400 17981000 39336 2392 35103 328002;328003;328004;328005;328006;328007;328008;328009;328010;328011;328012 259651;259652;259653;259654;259655;259656;259657;259658;259659;259660;259661;259662 259654 12 NYNECIRHETIR Unmodified 1603.7525 0.75252287 4443 Q9H832 UBE2Z Ubiquitin-conjugating enzyme E2 Z yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 27.938 28.185 3 0.0039677 30187 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 48.568 36.592 62623000 0 0 0 4172600 0 8176600 3939100 0 3139100 7260200 8740200 9914600 0 6338400 10943000 39337 4443 35104 328013;328014;328015;328016;328017;328018;328019;328020;328021 259663;259664;259665;259666 259663 4 NYNVPYEPDSVVMAEAPPGVETDLIDVGFTDDVK Unmodified 3694.7236 0.72363989 1728 P53990 IST1 IST1 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 98.498 93.763 3 7.0395E-22 116004 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.589 64.544 24940000 0 24940000 0 0 0 0 0 0 0 0 0 0 0 0 0 39338 1728 35105 328022 259667 259667 1 NYPATFWVNPQFK Unmodified 1610.7882 0.78816332 841 P07384 CAPN1 Calpain-1 catalytic subunit yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 85.165 85.231 2 1.1776E-07 98875 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 97.915 77.137 103720000 0 0 0 2724500 3876800 6083900 5689300 10495000 6227400 6981900 10163000 11291000 5172900 5354000 29663000 39339 841 35106 328023;328024;328025;328026;328027;328028;328029;328030;328031;328032;328033;328034 259668;259669;259670;259671;259672;259673;259674;259675;259676;259677;259678;259679;259680 259671 12 NYPATVHGALLSGLR Unmodified 1567.8471 0.84707518 397 O60341 KDM1A Lysine-specific histone demethylase 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 1 1 1 1 2 2 2 1 2 1 2 70.172 70.292 2;3 0.00034515 79912 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.631 58.917 208400000 0 0 0 3891300 3163700 19861000 7086500 16973000 13504000 18148000 17292000 23384000 21326000 11534000 52235000 39340 397 35107 328035;328036;328037;328038;328039;328040;328041;328042;328043;328044;328045;328046;328047;328048;328049;328050;328051 259681;259682;259683;259684;259685;259686;259687;259688;259689;259690;259691;259692;259693;259694 259684 10 NYPDPVSIIQK Unmodified 1272.6714 0.67140222 1441 P41252 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.9 3.81 3 1 6 1 2 1 1 1 2 1 1 76.256 73.897 2 0.0060484 88562 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 72.607 54.571 2236600000 21747000 2043500000 15872000 19356000 0 0 0 31250000 0 0 0 0 0 38382000 66518000 39341 1441 35108 328052;328053;328054;328055;328056;328057;328058;328059;328060;328061 259695;259696;259697;259698;259699;259700;259701;259702 259697 5 NYPLYRQDYNPK Unmodified 1569.7576 0.75759147 2708 Q53SF7 COBLL1 Cordon-bleu protein-like 1 yes yes 0 0 1 By MS/MS 2 0 1 1 51.509 43.548 3 0.0094973 60058 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.261 43.999 15689000 15689000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39342 2708 35109 328062 259703;259704 259704 2 NYPNTFWMNPQYLIK Oxidation (M) 1943.924 0.92400487 1057 P17655 CAPN2 Calpain-2 catalytic subunit yes yes 0 1 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 87.131 87.254 2 0.00025698 100854 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.82 57.096 10077000 0 0 0 0 0 0 0 0 0 3676200 0 0 0 1384000 5016600 39343 1057 35110 328063;328064;328065 259705 259705 1483 1 NYQQNYQNSESGEK Unmodified 1687.7074 0.70740639 1955 P67809 YBX1 Nuclease-sensitive element-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 15.845 16.019 2;3 1.783E-201 14870 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 278.83 263.2 2569500000 0 0 0 133320000 110780000 159430000 104810000 106180000 72935000 208400000 350430000 378300000 324490000 250760000 369690000 39344 1955 35111 328066;328067;328068;328069;328070;328071;328072;328073;328074;328075;328076;328077;328078;328079;328080;328081;328082;328083;328084;328085;328086;328087;328088;328089 259706;259707;259708;259709;259710;259711;259712;259713;259714;259715;259716;259717;259718;259719;259720;259721;259722;259723;259724;259725;259726;259727 259716 16 NYQSQADIPIR Unmodified 1303.6521 0.65206377 2456 Q14966 ZNF638 Zinc finger protein 638 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 49.42 49.814 2 0.0013294 55277 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 116.05 101.75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39345 2456 35112 328090;328091 259728;259729 259729 2 NYQVQFVTLK Unmodified 1238.6659 0.66592292 4973 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 75.039 74.474 2 0.0013001 86044 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 122.13 110.29 277670000 53365000 0 0 10773000 14354000 16784000 14499000 12609000 13270000 22657000 20922000 21681000 17113000 22505000 37139000 39346 4973 35113 328092;328093;328094;328095;328096;328097;328098;328099;328100;328101;328102;328103;328104 259730;259731;259732;259733;259734;259735;259736;259737;259738;259739;259740;259741;259742;259743;259744;259745;259746 259744 16 NYRDNYQAFCK Unmodified 1477.6408 0.64084715 1029 P15924 DSP Desmoplakin yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 35.741 35.741 3 0.021059 39776 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 34.695 29.076 51097000 0 0 0 35871000 4076100 0 0 3745700 0 0 0 7403900 0 0 0 39347 1029 35114 328105;328106;328107;328108 259747 259747 1 NYSDGSETSSEFSK Unmodified 1536.6216 0.62161108 4401 Q9H4L5 OSBPL3 Oxysterol-binding protein-related protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 28.653 28.775 2 2.0272E-16 31251 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 121.08 99.612 56450000 0 0 0 8919700 4810100 8319800 5643200 0 4434100 0 10090000 0 0 7452900 6780600 39348 4401 35115 328109;328110;328111;328112;328113;328114;328115;328116;328117 259748;259749;259750;259751;259752;259753;259754;259755;259756;259757;259758 259758 11 NYSEVIEVDESDVEEDIFPTTSK Unmodified 2644.1916 0.19156792 1614 P49959 MRE11A Double-strand break repair protein MRE11A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.29 0.452 5 2 2 4 1 92.565 87.566 2;3 7.417E-94 109866 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 161.14 153.02 114610000 37078000 74181000 3354200 0 0 0 0 0 0 0 0 0 0 0 0 39349 1614 35116 328118;328119;328120;328121;328122;328123;328124 259759;259760;259761;259762;259763;259764;259765;259766;259767;259768 259761 9 NYSPRPESGTVSDAPQLK Unmodified 1944.9541 0.95411903 5068 Q9UQ84 EXO1 Exonuclease 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 43.778 44.024 3 1.3863E-07 49184 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 79.97 67.452 210650000 0 0 0 0 17016000 17893000 20290000 0 18765000 33991000 22276000 27477000 27172000 0 25769000 39350 5068 35117 328125;328126;328127;328128;328129;328130;328131;328132;328133 259769;259770;259771;259772;259773;259774;259775;259776 259773 8 NYSPYYNTIDDLK Unmodified 1604.7359 0.73585297 1354 P35527;CON__P35527 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.22 2.36 8 1 82 2 5 2 5 4 7 7 21 4 5 5 6 7 9 2 76.751 76.551 2;3 4.8079E-51 82348 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 180.07 174.53 + 65224000000 83875000 2817700000 41186000 3942100000 3381900000 3951600000 1748200000 21720000000 2865700000 6727400000 4156400000 4357500000 4481000000 2548900000 2400700000 39351 1354 35118 328134;328135;328136;328137;328138;328139;328140;328141;328142;328143;328144;328145;328146;328147;328148;328149;328150;328151;328152;328153;328154;328155;328156;328157;328158;328159;328160;328161;328162;328163;328164;328165;328166;328167;328168;328169;328170;328171;328172;328173;328174;328175;328176;328177;328178;328179;328180;328181;328182;328183;328184;328185;328186;328187;328188;328189;328190;328191;328192;328193;328194;328195;328196;328197;328198;328199;328200;328201;328202;328203;328204;328205;328206;328207;328208;328209;328210;328211;328212;328213;328214;328215;328216;328217;328218;328219;328220;328221;328222;328223;328224 259777;259778;259779;259780;259781;259782;259783;259784;259785;259786;259787;259788;259789;259790;259791;259792;259793;259794;259795;259796;259797;259798;259799;259800;259801;259802;259803;259804;259805;259806;259807;259808;259809;259810;259811;259812;259813;259814;259815;259816;259817;259818;259819;259820;259821;259822;259823;259824;259825;259826;259827;259828;259829;259830;259831;259832;259833;259834;259835;259836;259837;259838;259839;259840;259841;259842;259843;259844;259845;259846;259847;259848;259849;259850;259851;259852;259853;259854;259855;259856;259857;259858;259859;259860;259861;259862;259863;259864;259865;259866;259867;259868;259869;259870;259871;259872;259873;259874;259875;259876;259877;259878 259844 95 NYSYLHCEWATISQLEK Unmodified 2140.9888 0.98878997 4517 Q9HCK8 CHD8 Chromodomain-helicase-DNA-binding protein 8 yes yes 0 0 0 By MS/MS 1 0 1 1 102.54 107.81 5 0.0033556 87693 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 24.918 16.793 8352900 8352900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39352 4517 35119 328225 259879 259879 1 NYTAYRQEPIASK Unmodified 1539.7682 0.76815616 4769 Q9NZJ0 DTL Denticleless protein homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33.272 32.431 3 0.0080788 34311 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.317 36.602 341480000 166110000 20823000 30503000 7613600 6770300 10188000 10338000 8159400 9274900 13086000 11598000 13565000 10783000 9588200 13086000 39353 4769 35120 328226;328227;328228;328229;328230;328231;328232;328233;328234;328235;328236;328237;328238;328239;328240 259880;259881;259882;259883;259884;259885 259881 4 NYTDEAIETDDLTIK Unmodified 1739.8101 0.81014013 219 O14818 PSMA7 Proteasome subunit alpha type-7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.9 3.82 1 4 3 12 3 4 1 1 1 1 1 1 1 1 1 1 1 1 1 74.483 73.166 2;3 1.4561E-168 82151 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 219.43 196.42 2619700000 50979000 2238800000 4451400 16693000 9498300 10900000 8905700 13532000 7332300 16553000 46977000 48267000 11373000 30577000 104890000 39354 219 35121 328241;328242;328243;328244;328245;328246;328247;328248;328249;328250;328251;328252;328253;328254;328255;328256;328257;328258;328259;328260 259886;259887;259888;259889;259890;259891;259892;259893;259894;259895;259896;259897;259898;259899;259900;259901;259902;259903 259892 16 NYTDNELEK Unmodified 1124.4986 0.49858282 721 P00367 GLUD1 Glutamate dehydrogenase 1, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 24.732 24.506 2 0.0071283 26355 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 73.248 49.293 77387000 0 34311000 0 0 0 0 9177700 11885000 6360600 0 2232300 2315200 1008600 0 10096000 39355 721 35122 328261;328262;328263;328264;328265;328266;328267;328268 259904;259905;259906;259907;259908 259904 5 NYTEDLSK Unmodified 968.44509 0.44509068 3713 Q969F9 HPS3 Hermansky-Pudlak syndrome 3 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 24.439 24.635 2 0.021457 26204 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 61.962 45.818 69857000 0 0 0 4556700 4575300 0 7378900 4915200 4510000 7655800 0 7871300 10570000 8698100 9125300 39356 3713 35123 328269;328270;328271;328272;328273;328274;328275;328276;328277;328278 259909;259910;259911;259912;259913 259910 5 NYTEELK Unmodified 895.42871 0.42871234 3158 Q86UW9 DTX2 Probable E3 ubiquitin-protein ligase DTX2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 25.476 25.651 2 0.023433 27002 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 85.359 50.254 346040000 0 0 0 27434000 41815000 34236000 19351000 35054000 24925000 49067000 45852000 65155000 0 0 3148000 39357 3158 35124 328279;328280;328281;328282;328283;328284;328285;328286;328287;328288 259914;259915;259916;259917;259918;259919 259915 6 NYTGDRLNFGLAR Unmodified 1495.7532 0.75317479 2672 Q3LXA3 DAK Bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase (cyclizing);ATP-dependent dihydroxyacetone kinase;FAD-AMP lyase (cyclizing) yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 62.759 63.143 3 0.0015671 71318 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.155 52.525 16904000 0 0 0 0 0 0 0 0 0 0 0 0 0 2719000 14185000 39358 2672 35125 328289;328290 259920 259920 1 NYTSVYDK Unmodified 988.45018 0.45017606 5118 Q9Y2T3 GDA Guanine deaminase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 25.317 25.559 2 0.01808 26922 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 64.734 42.603 156760000 0 0 0 10324000 3633500 0 0 11379000 5965000 7491700 25051000 24653000 7224100 14955000 46090000 39359 5118 35126 328291;328292;328293;328294;328295;328296;328297;328298;328299;328300 259921;259922;259923;259924 259921 4 NYVEELNR Unmodified 1035.4985 0.49852324 3998;3582 Q96T51;Q8WXA3 RUFY1;RUFY2 RUN and FYVE domain-containing protein 1;RUN and FYVE domain-containing protein 2 no no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.522 38.701 2 0.020846 42900 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 62.464 34.246 97388000 0 0 0 5546600 3231900 7279800 8029000 4273200 5375800 9410000 12254000 12250000 8152200 7993400 13591000 39360 3998;3582 35127 328301;328302;328303;328304;328305;328306;328307;328308;328309;328310;328311;328312 259925 259925 1 NYVGTNMK Unmodified 925.43275 0.43275186 3615 Q92538 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 20.87 21.131 2 0.025937 21772 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 58.286 42.847 40547000 0 0 0 0 0 5479300 4091200 0 3388700 946830 6319100 0 5565600 5102200 9653600 39361 3615 35128 328313;328314;328315;328316;328317;328318;328319;328320 259926;259927 259927 2 NYVHFAATQVQNR Unmodified 1546.7641 0.76407383 5052 Q9UPN9 TRIM33 E3 ubiquitin-protein ligase TRIM33 yes yes 0 0 0 By MS/MS 10 0 1 1 45.866 46.614 3 0.0022681 51897 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 41.644 29.952 10423000 0 0 0 0 0 0 0 0 0 0 0 10423000 0 0 0 39362 5052 35129 328321 259928 259928 1 NYVLNYLATRPK Unmodified 1450.7932 0.79324869 4923 Q9UIA9 XPO7 Exportin-7 yes yes 0 0 1 By MS/MS By matching By MS/MS 10 0 3 1 1 1 70.119 70.301 3 0.02687 80874 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 34.898 25.791 12704000 0 0 0 0 0 4539100 0 0 0 3166800 0 0 0 0 4997900 39363 4923 35130 328322;328323;328324 259929;259930 259929 2 NYVPEDEDLK Unmodified 1220.5561 0.55609769 3541 Q8WUD4 CCDC12 Coiled-coil domain-containing protein 12 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 41.5 41.812 2 0.015562 46652 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 50.04 0 13460000 0 0 0 0 0 0 0 0 0 7744900 5715000 0 0 0 0 39364 3541 35131 328325;328326 259931;259932 259931 2 NYVTPVNR Unmodified 961.49813 0.49812931 1934 P62993 GRB2 Growth factor receptor-bound protein 2 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching 10 0 7 1 1 1 1 1 1 1 26.741 27.077 2 0.010495 28515 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 79.469 36.554 75672000 0 0 0 0 0 4600200 5604000 0 0 5545500 15168000 19166000 0 7703600 17884000 39365 1934 35132 328327;328328;328329;328330;328331;328332;328333 259933;259934;259935 259935 3 NYYEQWGK Unmodified 1086.4771 0.47705951 1141 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 43.269 43.515 2 0.0099856 48024 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 81.119 64.975 166900000 0 0 0 7717800 0 8417200 5847100 10601000 0 8851500 21637000 24013000 13088000 15822000 50904000 39366 1141 35133 328334;328335;328336;328337;328338;328339;328340;328341;328342;328343 259936;259937;259938;259939;259940;259941;259942;259943;259944;259945;259946 259944 11 NYYGYQGYR Unmodified 1182.5094 0.50942227 2645 Q1KMD3 HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 40.151 40.279 2 0.0031256 45270 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 107.32 76.028 288220000 0 0 0 19587000 17722000 15902000 15112000 14785000 16366000 30697000 36384000 38705000 48455000 34500000 0 39367 2645 35134 328344;328345;328346;328347;328348;328349;328350;328351;328352;328353;328354 259947;259948;259949;259950;259951;259952;259953;259954;259955;259956;259957 259957 11 PAAAATGPPPGNTSSTQK Unmodified 1651.8166 0.81656291 4371 Q9H2P0 ADNP Activity-dependent neuroprotector homeobox protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.072 18.26 2 3.7071E-06 18361 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 98.353 85.217 55669000 0 0 0 4054200 3320800 5243100 4473300 3232000 3339200 6162700 4243400 5441700 4800300 3748000 7610300 39368 4371 35135 328355;328356;328357;328358;328359;328360;328361;328362;328363;328364;328365;328366 259958;259959;259960;259961;259962;259963;259964;259965;259966;259967;259968;259969;259970 259965 13 PAAAGAPPAK Unmodified 849.47085 0.47085192 1004 P14649 MYL6B Myosin light chain 6B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 1 2 2 1 1 2 1 2 1 2 2 8.3703 8.5125 2 0.011458 7230 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 54.205 32.658 21589000 0 0 0 1599800 1134300 1590500 1859300 786600 935020 2018200 2525800 3582400 1435200 1672500 2448900 39369 1004 35136 328367;328368;328369;328370;328371;328372;328373;328374;328375;328376;328377;328378;328379;328380;328381;328382;328383;328384 259971;259972;259973;259974 259974 3 PAAAPPPTPLR Unmodified 1086.6186 0.61857879 1054 P17535 JUND Transcription factor jun-D yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 42.431 42.547 2 0.0043491 47446 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 61.691 47.051 45458000 0 0 0 3206000 2597000 4713900 6561000 2587600 4037800 5618500 0 5519400 0 0 10617000 39370 1054 35137 328385;328386;328387;328388;328389;328390;328391;328392;328393 259975;259976;259977 259975 3 PAAAPPPTPLRADGAPSAAPPDGLLASPDLGLLK Unmodified 3213.7398 0.73976315 1054 P17535 JUND Transcription factor jun-D yes yes 0 0 1 By MS/MS 10 0 1 1 90.625 90.764 3 3.5755E-05 105115 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 26.329 24.191 3277500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3277500 39371 1054 35138 328394 259978 259978 1 PAAATVTKK Unmodified 885.52837 0.5283668 1038 P16403 HIST1H1C Histone H1.2 yes yes 0 0 1 By MS/MS 3 0 1 1 6.9881 3.6297 2 0.041294 5226 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 88.643 12.361 21842000 0 21842000 0 0 0 0 0 0 0 0 0 0 0 0 0 39372 1038 35139 328395 259979 259979 0 PAADADLQLSEILK Unmodified 1482.793 0.79297392 3184 Q86WJ1 CHD1L Chromodomain-helicase-DNA-binding protein 1-like yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 88.224 84.717 2 0.00081962 105294 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.182 83.039 92645000 0 90561000 2083900 0 0 0 0 0 0 0 0 0 0 0 0 39373 3184 35140 328396;328397;328398 259980;259981 259980 2 PAAEPSNGIPDSSK Unmodified 1368.6521 0.65212334 3201 Q86XZ4 SPATS2 Spermatogenesis-associated serine-rich protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.12 27.318 2 0.0004332 29436 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 77.379 64.803 54942000 0 0 0 2588600 3073300 5565800 5857800 3959900 2791500 4131800 5115500 6701300 5380600 3398700 6376800 39374 3201 35141 328399;328400;328401;328402;328403;328404;328405;328406;328407;328408;328409;328410 259982;259983;259984;259985;259986;259987;259988;259989;259990 259982 9 PAAGGTAPLPPWK Unmodified 1261.6819 0.68190733 2595 Q15942 ZYX Zyxin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 1 3 1 1 2 2 2 1 2 1 67.803 66.481 2 6.3307E-141 87869 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 246.59 217.89 226310000 55436000 110180000 0 0 0 0 3227900 2095800 1791400 10994000 0 19679000 0 8327000 14577000 39375 2595 35142 328411;328412;328413;328414;328415;328416;328417;328418;328419;328420;328421;328422;328423;328424;328425;328426 259991;259992;259993;259994;259995;259996;259997;259998;259999;260000;260001;260002;260003;260004;260005;260006;260007;260008;260009;260010;260011;260012 260004 18 PAALAAAPAK Unmodified 879.5178 0.51780212 2331 Q13619 CUL4A Cullin-4A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 25.048 24.122 2 4.7646E-06 30953 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.12 84.248 1461500000 31071000 1106900000 10080000 13399000 9889800 31399000 14884000 12665000 12866000 34481000 25413000 45139000 24084000 25547000 63669000 39376 2331 35143 328427;328428;328429;328430;328431;328432;328433;328434;328435;328436;328437;328438;328439;328440;328441;328442 260013;260014;260015;260016;260017;260018;260019;260020;260021;260022;260023;260024;260025;260026;260027;260028;260029;260030 260016 18 PAALAAAPAKPGGAGGSK Unmodified 1490.8205 0.82052608 2331 Q13619 CUL4A Cullin-4A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 4 10 2 1 1 1 1 1 1 1 1 1 1 1 1 28.572 27.314 2;3 9.1291E-06 29122 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 49.425 43.478 228790000 89953000 15718000 3717400 8159300 7616400 0 11650000 10375000 0 11320000 20164000 19676000 8493100 8313900 13634000 39377 2331 35144 328443;328444;328445;328446;328447;328448;328449;328450;328451;328452;328453;328454;328455;328456 260031;260032;260033;260034;260035;260036;260037;260038;260039;260040;260041;260042;260043 260032 12 PAANFDAIR Unmodified 973.49813 0.49812931 1100 P20073 ANXA7 Annexin A7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 2 1 1 1 1 1 44.789 45.198 2 0.0051376 50898 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 82.452 51.163 81773000 0 0 0 0 0 0 0 6989400 0 13454000 12074000 12913000 8956100 7221300 20165000 39378 1100 35145 328457;328458;328459;328460;328461;328462;328463;328464;328465 260044;260045;260046;260047;260048;260049;260050;260051;260052 260045 9 PAAPFPRGELESPK Unmodified 1494.7831 0.78307794 4296 Q9GZN2 TGIF2 Homeobox protein TGIF2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 51.678 51.938 3 0.038417 58828 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 36.944 27.101 61894000 0 0 0 0 0 6571500 5429600 0 5224100 8927100 11110000 0 6738700 6469400 11424000 39379 4296 35146 328466;328467;328468;328469;328470;328471;328472;328473 260053 260053 0 PAAPGGAGNTGTK Unmodified 1097.5465 0.54653606 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 8.1847 8.3155 2 4.1996E-08 6777 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 104.79 63.766 68639000 0 0 0 3126400 2297500 4427000 3197400 3024800 4522200 5406600 12333000 11810000 5844300 3703600 8946200 39380 2361 35147 328474;328475;328476;328477;328478;328479;328480;328481;328482;328483;328484;328485 260054;260055;260056;260057;260058;260059;260060;260061;260062;260063;260064;260065 260064 12 PAAPPAPGPGQLTLR Unmodified 1441.8041 0.80414773 4019 Q99536 VAT1 Synaptic vesicle membrane protein VAT-1 homolog yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 2 2 2 2 2 2 2 1 1 1 2 1 65.649 65.679 2;3 7.408E-07 75264 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 85.813 81.764 145350000 0 0 0 12661000 8244500 10900000 12102000 11192000 6862600 15788000 14154000 15484000 6749800 13377000 17839000 39381 4019 35148 328486;328487;328488;328489;328490;328491;328492;328493;328494;328495;328496;328497;328498;328499;328500;328501;328502;328503;328504;328505 260066;260067;260068;260069;260070;260071;260072;260073;260074;260075;260076;260077;260078 260071 12 PAAPSPATAATTAAAASTAASSTASSASK Unmodified 2475.2089 0.20888974 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 2 1 1 1 1 1 1 1 1 1 1 1 67.654 67.804 3 7.2165E-73 77796 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 115.45 112.3 229380000 0 0 0 0 14522000 17392000 14533000 19487000 20594000 20420000 20051000 33877000 23322000 20061000 25119000 39382 4139 35149 328506;328507;328508;328509;328510;328511;328512;328513;328514;328515;328516;328517;328518 260079;260080;260081;260082;260083;260084;260085;260086;260087;260088;260089;260090;260091;260092;260093;260094;260095 260080 17 PAASDLPVPAEGVR Unmodified 1377.7252 0.72522871 2117 Q05682 CALD1 Caldesmon yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 61.982 61.307 2 5.6156E-19 70056 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 131.83 119.21 294630000 0 66288000 0 9244400 10577000 9314500 8928800 12005000 16229000 16924000 29769000 33289000 17632000 20558000 43870000 39383 2117 35150 328519;328520;328521;328522;328523;328524;328525;328526;328527;328528;328529;328530;328531;328532 260096;260097;260098;260099;260100;260101;260102;260103;260104;260105;260106;260107;260108;260109;260110;260111;260112 260097 17 PAASDLPVPAEGVRNIK Unmodified 1732.9472 0.94718315 2117 Q05682 CALD1 Caldesmon yes yes 0 0 1 By MS/MS By MS/MS 2.25 0.433 3 1 2 2 68.971 64.49 2;3 2.0984E-52 79602 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 124.09 119.99 133990000 0 75285000 58703000 0 0 0 0 0 0 0 0 0 0 0 0 39384 2117 35151 328533;328534;328535;328536 260113;260114;260115;260116;260117 260117 5 PAASGPLSHPTPLSAPPSSVPLK Unmodified 2207.195 0.195018 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 74.886 73.75 3 8.2884E-84 94371 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 148.64 133.75 1251000000 143520000 149690000 14849000 38713000 53983000 82654000 64823000 89178000 64179000 91408000 81579000 102160000 79504000 87370000 107380000 39385 1364 35152 328537;328538;328539;328540;328541;328542;328543;328544;328545;328546;328547;328548;328549;328550;328551;328552 260118;260119;260120;260121;260122;260123;260124;260125;260126;260127;260128;260129;260130;260131;260132;260133;260134;260135;260136;260137;260138;260139;260140;260141;260142 260130 24 PAASIASGGSNSSNK Unmodified 1346.6426 0.64262129 389 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11.923 11.524 2 1.4461E-14 10684 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 129.34 107.88 177170000 6842300 36458000 0 10791000 7903200 12332000 10016000 8711400 9469000 13411000 8847100 18076000 12450000 11383000 10479000 39386 389 35153 328553;328554;328555;328556;328557;328558;328559;328560;328561;328562;328563;328564;328565;328566 260143;260144;260145;260146;260147;260148;260149;260150;260151;260152;260153;260154;260155;260156 260152 14 PAASITSK Unmodified 773.42832 0.42831841 352 O43670 ZNF207 BUB3-interacting and GLEBS motif-containing protein ZNF207 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 9.8974 9.373 2 0.0074056 8330 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 89.752 65.957 1195700000 76388000 901550000 13028000 14960000 13592000 15347000 20046000 16453000 17122000 8466800 22202000 14395000 13254000 15576000 33344000 39387 352 35154 328567;328568;328569;328570;328571;328572;328573;328574;328575;328576;328577;328578;328579;328580;328581;328582 260157;260158;260159;260160;260161;260162;260163;260164;260165;260166;260167;260168;260169 260158 5 PAASITSKPATLTTTSATSK Unmodified 1933.0368 0.036786022 352 O43670 ZNF207 BUB3-interacting and GLEBS motif-containing protein ZNF207 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 41.451 41.641 3 4.4137E-54 45852 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 124.25 119.16 146880000 0 0 0 10953000 11330000 0 13366000 11491000 3358200 8005300 14166000 18905000 12690000 13762000 28856000 39388 352 35155 328583;328584;328585;328586;328587;328588;328589;328590;328591;328592;328593 260170;260171;260172;260173;260174;260175;260176;260177 260175 8 PAASLAVHTDK Unmodified 1108.5877 0.58767259 2325 Q13610 PWP1 Periodic tryptophan protein 1 homolog yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 1 2 27.026 22.764 2 0.00060942 31916 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.048 70.918 11207000 10240000 0 967690 0 0 0 0 0 0 0 0 0 0 0 0 39389 2325 35156 328594;328595;328596 260178;260179;260180 260178 3 PAATHHYLVVPK Unmodified 1331.735 0.73500553 4568 Q9NQE9 HINT3 Histidine triad nucleotide-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 34.836 35.074 3 0.0064419 37264 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 38.021 24.621 167630000 0 0 0 0 7671200 17556000 8296800 15731000 10140000 20791000 20138000 17340000 17170000 10177000 22622000 39390 4568 35157 328597;328598;328599;328600;328601;328602;328603;328604;328605;328606;328607 260181;260182;260183;260184 260184 4 PAAVAAENEEIGSHIK Unmodified 1634.8264 0.82639932 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.04 3.41 6 1 21 2 3 2 1 2 2 2 1 2 2 2 1 2 2 2 45.544 44.243 2;3 1.2126E-82 58748 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 216.34 202.11 4207300000 72338000 1512100000 1222500000 49341000 80975000 176110000 96720000 77393000 81079000 133060000 94254000 134750000 112080000 97097000 267510000 39391 5187 35158 328608;328609;328610;328611;328612;328613;328614;328615;328616;328617;328618;328619;328620;328621;328622;328623;328624;328625;328626;328627;328628;328629;328630;328631;328632;328633;328634;328635 260185;260186;260187;260188;260189;260190;260191;260192;260193;260194;260195;260196;260197;260198;260199;260200;260201;260202;260203;260204;260205;260206;260207;260208;260209;260210;260211;260212 260194 22 PAAVATAMAR Unmodified 957.50659 0.5065855 4669 Q9NVI1 FANCI Fanconi anemia group I protein yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 29.035 29.54 2 0.0029636 30918 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.334 33.887 44951000 0 0 0 0 0 0 0 0 0 7218500 11619000 12696000 0 0 13418000 39392 4669 35159 328636;328637;328638;328639 260213;260214;260215 260214 3 PAAVLKPSDWEK Unmodified 1339.7136 0.71360139 4323 Q9H0D6 XRN2 5'-3' exoribonuclease 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 51.791 51.963 3 0.00063655 57425 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.419 53.349 105510000 0 0 0 0 3635600 9829500 6158000 5672300 11866000 11500000 11971000 0 8636000 8488600 27755000 39393 4323 35160 328640;328641;328642;328643;328644;328645;328646;328647;328648;328649;328650 260216;260217;260218;260219;260220;260221;260222;260223 260218 8 PAAVSEELK Unmodified 942.50221 0.50221163 299 O43156 TTI1 TELO2-interacting protein 1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 28.468 28.115 2 0.0029098 35915 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 161.02 91.822 114130000 0 72914000 0 0 4225900 0 4673100 0 3332200 5664500 0 9066500 0 5014500 9236500 39394 299 35161 328651;328652;328653;328654;328655;328656;328657;328658;328659 260224;260225;260226;260227;260228;260229;260230;260231;260232 260225 8 PAAVVAPITTGYTVK Unmodified 1486.8395 0.83953018 4497 Q9HB71 CACYBP Calcyclin-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.73 3.9 1 13 3 24 6 9 2 2 2 2 2 2 2 2 2 2 2 2 2 73.581 71.997 2;3 2.0029E-50 89611 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 165.66 151.2 9134800000 475250000 5312300000 132500000 119620000 101860000 465030000 185900000 168870000 104050000 353050000 367240000 315040000 148740000 244360000 640960000 39395 4497 35162 328660;328661;328662;328663;328664;328665;328666;328667;328668;328669;328670;328671;328672;328673;328674;328675;328676;328677;328678;328679;328680;328681;328682;328683;328684;328685;328686;328687;328688;328689;328690;328691;328692;328693;328694;328695;328696;328697;328698;328699;328700 260233;260234;260235;260236;260237;260238;260239;260240;260241;260242;260243;260244;260245;260246;260247;260248;260249;260250;260251;260252;260253;260254;260255;260256;260257;260258;260259;260260;260261;260262;260263;260264 260238 27 PAAVVLQTK Unmodified 925.55967 0.55966693 2441 Q14697 GANAB Neutral alpha-glucosidase AB yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 35.586 34.489 2 1.698E-06 44317 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 164.72 142.95 986300000 121320000 600240000 12374000 7595800 7706500 21157000 9113700 12522000 8241200 20656000 36501000 31692000 16643000 16105000 64434000 39396 2441 35163 328701;328702;328703;328704;328705;328706;328707;328708;328709;328710;328711;328712;328713;328714;328715;328716 260265;260266;260267;260268;260269;260270;260271;260272;260273;260274;260275;260276;260277;260278;260279;260280;260281;260282;260283 260269 12 PADAVYGQK Unmodified 947.47125 0.47124585 2263 Q13283 G3BP1 Ras GTPase-activating protein-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 15.221 14.826 2 2.693E-06 14832 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 172.15 116.02 1022500000 0 461680000 0 43251000 26289000 61061000 41152000 0 62233000 58938000 69068000 38800000 50387000 48105000 61508000 39397 2263 35164 328717;328718;328719;328720;328721;328722;328723;328724;328725;328726;328727;328728;328729;328730 260284;260285;260286;260287;260288;260289;260290;260291;260292;260293;260294;260295;260296;260297;260298 260284 7 PADSQDVHELVLSK Unmodified 1536.7784 0.77838649 28 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.93 3.77 4 2 9 1 4 1 1 1 1 1 1 1 1 1 1 51.665 49.564 2;3 2.8726E-29 64218 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 153.32 120.59 662940000 19381000 389020000 9490300 0 18101000 31617000 12230000 22677000 20882000 37556000 25040000 30699000 0 0 46246000 39398 28 35165 328731;328732;328733;328734;328735;328736;328737;328738;328739;328740;328741;328742;328743;328744;328745 260299;260300;260301;260302;260303;260304;260305;260306;260307;260308;260309;260310;260311;260312;260313;260314;260315;260316 260304 18 PADTEPPPLLVYK Unmodified 1438.7708 0.77078192 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 76.7 76.172 2 8.7336E-34 87008 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 170.99 161.66 611720000 0 183080000 0 18114000 18217000 36565000 26331000 28548000 30776000 37572000 36779000 51789000 42539000 41248000 60159000 39399 2930 35166 328746;328747;328748;328749;328750;328751;328752;328753;328754;328755;328756;328757;328758;328759 260317;260318;260319;260320;260321;260322;260323;260324;260325;260326;260327;260328;260329;260330 260326 14 PADTVEVVIDPDAHHAESEAHLVEEAQVITLDGTK Unmodified 3734.8275 0.82752811 2128 Q06546 GABPA GA-binding protein alpha chain yes yes 0 0 0 By MS/MS 2 0 1 1 91.623 83.493 5 1.6168E-22 108332 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.902 63.333 18609000 18609000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39400 2128 35167 328760 260331 260331 1 PADVEEPAVPQTPR Unmodified 1504.7522 0.75217174 3823 Q96EV2 RBM33 RNA-binding protein 33 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 49.339 49.73 2 1.8863E-21 55290 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 144.65 119.21 23993000 0 0 0 0 0 0 12189000 0 0 0 0 0 0 0 11804000 39401 3823 35168 328761;328762;328763;328764;328765;328766 260332;260333;260334;260335;260336;260337 260335 6 PAEAPTAPSPAQTLENSEPAPVSQLQSR Unmodified 2872.4203 0.4202795 4898 Q9UHD8 SEPT9 Septin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.673 77.731 3 1.8727E-119 89707 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 156.7 151.08 284540000 0 0 0 8557500 16739000 24840000 15003000 15738000 27766000 27549000 37581000 39581000 22884000 13956000 34347000 39402 4898 35169 328767;328768;328769;328770;328771;328772;328773;328774;328775;328776;328777;328778 260338;260339;260340;260341;260342;260343;260344;260345;260346;260347;260348;260349;260350;260351;260352;260353;260354 260338 17 PAEATAGSGGVNGGEEQGLGK Unmodified 1884.8813 0.88134801 2645 Q1KMD3 HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 2 2 1 1 2 2 2 1 1 2 1 31.335 31.498 2;3 0 33765 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 333.47 311.92 452750000 0 0 0 16500000 39140000 47702000 22766000 21517000 32064000 46242000 43772000 45349000 39244000 53324000 45132000 39403 2645 35170 328779;328780;328781;328782;328783;328784;328785;328786;328787;328788;328789;328790;328791;328792;328793;328794;328795;328796 260355;260356;260357;260358;260359;260360;260361;260362;260363;260364;260365;260366;260367;260368;260369;260370;260371 260368 13 PAEATAGSGGVNGGEEQGLGKREEDEPEER Unmodified 3054.3762 0.37624243 2645 Q1KMD3 HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes yes 0 0 2 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 33.315 33.589 4 3.9423E-46 36946 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 88.001 85.55 60791000 0 0 0 0 4393400 0 3740600 0 2455700 7904700 8546800 12948000 9015500 4738400 7048000 39404 2645 35171 328797;328798;328799;328800;328801;328802;328803;328804;328805 260372;260373;260374;260375;260376;260377;260378 260376 7 PAEELAQLWAAEELDMK Oxidation (M) 1958.9295 0.92954376 4394 Q9H4A4 RNPEP Aminopeptidase B yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 1 3 1 93.364 88.977 2;3 3.8679E-54 111808 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 151.44 143.72 112760000 14620000 86681000 11463000 0 0 0 0 0 0 0 0 0 0 0 0 39405 4394 35172 328806;328807;328808;328809;328810 260379;260380;260381;260382;260383;260384 260383 5860 5 PAEELAQLWAAEELDMK Unmodified 1942.9346 0.93462914 4394 Q9H4A4 RNPEP Aminopeptidase B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 6 2 2 4 2 96.699 92.422 2;3 3.8434E-117 114687 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 216.46 184.4 186740000 39200000 143570000 3970000 0 0 0 0 0 0 0 0 0 0 0 0 39406 4394 35172 328811;328812;328813;328814;328815;328816;328817;328818 260385;260386;260387;260388;260389;260390 260385 6 PAEFTIDTK Unmodified 1020.5128 0.51277632 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.18 3.74 3 1 7 3 1 1 1 1 1 1 1 1 48.642 47.453 2 0.0071628 53947 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 73.157 62.283 423840000 0 355700000 7753700 0 0 10586000 0 0 0 5889800 7606000 8008100 5987500 6122200 16184000 39407 487 35173 328819;328820;328821;328822;328823;328824;328825;328826;328827;328828;328829 260391;260392;260393;260394;260395;260396;260397;260398;260399;260400;260401;260402 260391 11 PAEFTVDAK Unmodified 976.48656 0.48656157 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.79 1 4 1 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 42.544 41.931 2 4.3867E-09 41067 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 163.15 111.82 3151100000 19607000 2717800000 28099000 13282000 11810000 50319000 13911000 18508000 19931000 26757000 49700000 43764000 34124000 46837000 56610000 39408 1124 35174 328830;328831;328832;328833;328834;328835;328836;328837;328838;328839;328840;328841;328842;328843;328844;328845;328846;328847 260403;260404;260405;260406;260407;260408;260409;260410;260411;260412;260413;260414;260415;260416;260417;260418;260419;260420;260421;260422 260418 17 PAEIPELK Unmodified 895.50148 0.50148335 4215 Q9BWU0 SLC4A1AP Kanadaptin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.6 3.67 3 7 1 1 1 1 1 1 1 1 1 1 53.004 51.378 2 0.0068825 57007 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 92.47 69.451 282610000 6535700 201930000 3312700 0 5616900 10212000 0 7787700 0 9402500 11312000 11224000 0 0 15274000 39409 4215 35175 328848;328849;328850;328851;328852;328853;328854;328855;328856;328857 260423;260424;260425;260426;260427;260428;260429 260426 7 PAEKPAETPVATSPTATDSTSGDSSR Unmodified 2559.1936 0.19363361 1746 P54727 RAD23B UV excision repair protein RAD23 homolog B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 33.771 33.996 3 1.0205E-62 36789 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 89.039 77.739 28713000 0 0 0 0 2513700 0 4741000 0 0 0 9597500 8477600 0 3383400 0 39410 1746 35176 328858;328859;328860;328861;328862 260430;260431;260432;260433;260434 260433 5 PAENTLFK Unmodified 918.48108 0.48108226 2456 Q14966 ZNF638 Zinc finger protein 638 yes yes 0 0 0 By MS/MS 2 0 1 1 43.799 38.58 2 0.012153 50178 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.02 67.547 70961000 0 70961000 0 0 0 0 0 0 0 0 0 0 0 0 0 39411 2456 35177 328863 260435 260435 1 PAEPEGGTDR Unmodified 1027.4571 0.45705235 1983 P78415 IRX3 Iroquois-class homeodomain protein IRX-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 7.2204 7.343 2 0.00091175 4342 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 114.89 108.72 132680000 0 0 0 9577900 8312600 10938000 11427000 11912000 10766000 9792100 27504000 0 11488000 8907500 12055000 39412 1983 35178 328864;328865;328866;328867;328868;328869;328870;328871;328872;328873;328874 260436;260437;260438;260439;260440;260441;260442;260443;260444;260445 260443 10 PAESSLAFSNEETSTEK Unmodified 1825.8218 0.82176745 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 47.825 47.49 2 6.0589E-72 59839 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 217.88 206.15 43440000 0 17131000 0 0 0 3607100 1627000 0 2331600 0 3490000 3357700 3682200 3379200 4834700 39413 2193 35179 328875;328876;328877;328878;328879;328880;328881;328882;328883 260446;260447;260448 260446 3 PAETPVATSPTATDSTSGDSSR Unmodified 2133.9662 0.96619985 1746 P54727 RAD23B UV excision repair protein RAD23 homolog B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 1 2 2 2 1 2 2 34.906 35.083 2;3 6.8832E-191 37492 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 252.43 247.44 559470000 0 0 0 17031000 9701300 16429000 23092000 18428000 9359300 32087000 75926000 80515000 20193000 81180000 175530000 39414 1746 35180 328884;328885;328886;328887;328888;328889;328890;328891;328892;328893;328894;328895;328896;328897;328898;328899;328900;328901;328902;328903;328904;328905 260449;260450;260451;260452;260453;260454;260455;260456;260457;260458;260459;260460;260461;260462;260463;260464 260455 15 PAFEEFCLPTK Unmodified 1337.6326 0.63257388 4277;4480 Q9BZX2;Q9HA47 UCK2;UCK1 Uridine-cytidine kinase 2;Uridine-cytidine kinase 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 79.743 79.091 2 1.0262E-12 90602 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 148.91 140 1048700000 0 194610000 9108500 26569000 45487000 54668000 42602000 77901000 52258000 86987000 73935000 114810000 75120000 71574000 123120000 39415 4277;4480 35181 328906;328907;328908;328909;328910;328911;328912;328913;328914;328915;328916;328917;328918;328919;328920 260465;260466;260467;260468;260469;260470;260471;260472;260473;260474;260475;260476;260477;260478;260479 260475 13 PAFFAEK Unmodified 808.41194 0.41194006 773 P04083 ANXA1 Annexin A1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.9 3.81 6 2 12 3 3 2 1 1 1 1 1 1 1 1 1 1 1 1 46.629 44.941 2 0.013291 46300 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 122.79 122.79 5855100000 2118200000 1832600000 1455900000 30545000 11340000 26908000 20140000 48396000 14582000 27393000 49355000 49696000 25334000 31916000 112760000 39416 773 35182 328921;328922;328923;328924;328925;328926;328927;328928;328929;328930;328931;328932;328933;328934;328935;328936;328937;328938;328939;328940 260480;260481;260482;260483;260484;260485;260486;260487;260488;260489;260490;260491;260492;260493;260494;260495;260496;260497;260498;260499;260500;260501;260502;260503;260504;260505;260506;260507;260508;260509;260510;260511;260512;260513 260491 34 PAFGQQHQQQPK Unmodified 1392.6898 0.68984625 1592 P49750 YLPM1 YLP motif-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 17.186 12.977 3 0.0034469 18847 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.466 46.329 13030000 13030000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39417 1592 35183 328941 260514;260515 260514 2 PAFGTPLEEHLK Unmodified 1337.698 0.69795133 2861 Q68EM7 ARHGAP17 Rho GTPase-activating protein 17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.65 3.65 5 12 2 1 2 1 1 1 1 1 1 1 1 1 1 1 1 63.775 62.507 2;3 1.363E-08 85784 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 135.55 106.08 461170000 24387000 157330000 127690000 7868500 5722700 13730000 8952000 10912000 8418900 15803000 16512000 14902000 12451000 14013000 22477000 39418 2861 35184 328942;328943;328944;328945;328946;328947;328948;328949;328950;328951;328952;328953;328954;328955;328956;328957;328958 260516;260517;260518;260519;260520;260521;260522;260523;260524;260525;260526;260527;260528;260529 260522 11 PAFLEFLK Unmodified 963.54295 0.54295423 239 O15013;Q9HCE6 ARHGEF10;ARHGEF10L Rho guanine nucleotide exchange factor 10;Rho guanine nucleotide exchange factor 10-like protein yes no 0 0 0 By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 87.756 87.881 2 0.015495 101653 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.787 51.86 7420500 0 0 0 0 0 963670 301620 0 535510 628810 0 675610 654930 860850 2799500 39419 239 35185 328959;328960;328961;328962;328963;328964;328965;328966 260530 260530 1 PAFPSGLQK Unmodified 943.51272 0.51271674 2893 Q6MZP7 LIN54 Protein lin-54 homolog yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 46.887 47.122 2 0.014232 53199 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 58.604 15.69 81281000 0 0 0 0 4242800 6719900 6172600 6164000 5503600 9041200 6570300 10483000 8235800 8015000 10133000 39420 2893 35186 328967;328968;328969;328970;328971;328972;328973;328974;328975;328976;328977 260531;260532;260533;260534 260531 3 PAFTEASCPLSR Unmodified 1334.6289 0.62888548 276 O15357 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 51.895 52.082 2 0.00013587 57801 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 94.297 69.421 28113000 0 0 0 0 2951300 0 5414500 0 0 0 3525800 0 2192400 0 14029000 39421 276 35187 328978;328979;328980;328981;328982;328983;328984 260535;260536;260537;260538 260537 3 PAFTEEDVLNIFPVVK Unmodified 1816.9611 0.96110188 465 O75153 CLUH Clustered mitochondria protein homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 1 4 1 99.002 94.323 2;3 0 117037 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 346.19 333.58 333430000 14942000 314840000 3655400 0 0 0 0 0 0 0 0 0 0 0 0 39422 465 35188 328985;328986;328987;328988;328989;328990 260539;260540;260541;260542;260543 260539 3 PAGGDFGEVLNSAANASATTTEPLPEK Unmodified 2643.2664 0.26640462 1768 P55327 TPD52 Tumor protein D52 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.61 3.6 12 3 34 1 10 4 2 3 3 3 3 3 2 3 3 3 3 3 82.711 81.828 2;3;4 0 94723 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 251.09 245.29 9209000000 1518300 5582100000 140950000 37388000 294360000 184720000 120840000 277800000 203010000 586370000 493210000 484880000 69077000 157670000 575060000 39423 1768 35189 328991;328992;328993;328994;328995;328996;328997;328998;328999;329000;329001;329002;329003;329004;329005;329006;329007;329008;329009;329010;329011;329012;329013;329014;329015;329016;329017;329018;329019;329020;329021;329022;329023;329024;329025;329026;329027;329028;329029;329030;329031;329032;329033;329034;329035;329036;329037;329038;329039 260544;260545;260546;260547;260548;260549;260550;260551;260552;260553;260554;260555;260556;260557;260558;260559;260560;260561;260562;260563;260564;260565;260566;260567;260568;260569;260570;260571 260545 23 PAGGPKPPSGK Unmodified 991.54508 0.5450795 1641 P50990 CCT8 T-complex protein 1 subunit theta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.39 3.7 5 1 12 1 3 2 1 1 1 1 1 1 1 1 1 1 1 1 8.4465 7.5178 2 1.7695E-15 11457 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 160.75 121.09 619590000 393060000 87338000 19409000 2914100 2953800 6767100 5027200 4763300 4769000 9318700 34936000 10396000 9528600 11846000 16564000 39424 1641 35190 329040;329041;329042;329043;329044;329045;329046;329047;329048;329049;329050;329051;329052;329053;329054;329055;329056;329057 260572;260573;260574;260575;260576;260577;260578;260579;260580;260581;260582;260583;260584 260578 6 PAGPAGDEPAESPSETPGPSPAGPTR Unmodified 2428.1143 0.11426107 4782 Q9NZT2 OGFR Opioid growth factor receptor yes no 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 46.243 46.717 3 1.4753E-07 51635 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.74 41.584 19722000 0 0 0 0 0 0 0 0 0 0 6192900 0 0 3017500 10512000 39425 4782 35191 329058;329059;329060 260585;260586 260585 2 PAGPPGILALLDEECWFPK Unmodified 2109.0605 0.060498352 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS 2.5 0.5 2 2 4 102.24 98.332 2;3 1.3838E-21 121894 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.67 110.57 13745000 0 13745000 0 0 0 0 0 0 0 0 0 0 0 0 0 39426 1356 35192 329061;329062;329063;329064 260587;260588;260589;260590 260588 4 PAGPTVEQQGEMAR Oxidation (M) 1485.6882 0.68819127 1749 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 22.352 22.583 2 0.00027802 23680 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 70.942 53.133 32621000 0 0 0 1475800 1218300 4552600 0 2527000 2139100 0 5816200 4373200 2809900 3227100 4481900 39427 1749 35193 329065;329066;329067;329068;329069;329070;329071;329072;329073;329074 260591;260592;260593 260591 2845 3 PAGPTVEQQGEMAR Unmodified 1469.6933 0.69327665 1749 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 31.825 32.179 2 1.0152E-13 34593 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 136.48 112.73 44373000 0 0 0 0 0 9851600 0 0 5796400 4698200 4142900 7108200 2975500 2275100 7524800 39428 1749 35193 329075;329076;329077;329078;329079;329080;329081;329082;329083 260594;260595;260596;260597;260598;260599;260600;260601;260602 260601 9 PAGPVQAVPPPPPVPTEPK Unmodified 1874.0302 0.030184501 2539 Q15459 SF3A1 Splicing factor 3A subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 3 24 1 2 2 2 2 2 2 2 2 2 2 2 2 2 73.268 72.665 2;3 1.7338E-65 84138 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 163.99 147.05 1131900000 12494000 79694000 0 57840000 62692000 71961000 79191000 74730000 66487000 102660000 103040000 113640000 85380000 102290000 119810000 39429 2539 35194 329084;329085;329086;329087;329088;329089;329090;329091;329092;329093;329094;329095;329096;329097;329098;329099;329100;329101;329102;329103;329104;329105;329106;329107;329108;329109;329110 260603;260604;260605;260606;260607;260608;260609;260610;260611;260612;260613;260614;260615;260616;260617;260618;260619;260620;260621;260622;260623;260624;260625 260625 20 PAGPVQAVPPPPPVPTEPKQPTEEEASSK Unmodified 2960.5131 0.51311725 2539 Q15459 SF3A1 Splicing factor 3A subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 67.974 68.216 3 7.4964E-08 78107 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 38.006 32.462 14661000 0 0 0 0 0 0 3644600 3880200 0 0 0 7136500 0 0 0 39430 2539 35195 329111;329112;329113 260626;260627 260626 1 PAGREVEPAPVGGEHPSAAAPGPGK Unmodified 2334.1717 0.17165679 3292 Q8IZ73 RPUSD2 RNA pseudouridylate synthase domain-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 5 2 1 2 41.869 36.694 3;4 2.0435E-25 50451 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.974 85.31 168490000 56019000 27290000 85177000 0 0 0 0 0 0 0 0 0 0 0 0 39431 3292 35196 329114;329115;329116;329117;329118 260628;260629;260630;260631;260632;260633;260634;260635 260631 8 PAGRGTITVSAQELK Unmodified 1526.8417 0.84165545 4064 Q99829 CPNE1 Copine-1 yes yes 0 0 1 By MS/MS 2 0 1 1 54.567 46.459 3 0.0043948 63643 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 41.014 28.746 16111000 16111000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39432 4064 35197 329119 260636;260637 260636 2 PAGVLGAVNK Unmodified 924.53927 0.53926584 2647 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38.445 37.547 2 6.5512E-05 40041 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 143.85 116.72 339690000 19901000 24696000 1171500 12315000 12099000 32071000 17365000 16425000 18852000 26947000 29509000 39978000 22364000 23847000 42150000 39433 2647 35198 329120;329121;329122;329123;329124;329125;329126;329127;329128;329129;329130;329131;329132;329133;329134 260638;260639;260640;260641;260642;260643;260644;260645;260646;260647;260648;260649;260650 260641 13 PAGVLGAVNKPLSATGR Unmodified 1606.9155 0.91548909 2647 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 58.809 58.917 3 0.0012381 66241 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.623 43.718 62766000 0 0 0 3466800 3779000 1979500 7477000 6128200 0 4778200 6965300 9554100 4500600 3219500 10918000 39434 2647 35199 329135;329136;329137;329138;329139;329140;329141;329142;329143;329144;329145 260651;260652;260653;260654;260655;260656 260652 6 PAHILQEK Unmodified 934.52362 0.52361577 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15.876 15.488 2 0.0045343 14521 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 110.31 79.89 487610000 367300000 0 35605000 3202700 2203700 4795900 6440800 3545200 3050600 7221800 9988300 10233000 11014000 10849000 12168000 39435 2378 35200 329146;329147;329148;329149;329150;329151;329152;329153;329154;329155;329156;329157;329158;329159 260657;260658;260659;260660;260661;260662;260663;260664;260665;260666;260667;260668 260657 12 PAHSQNQSNFSSYSSK Unmodified 1767.7812 0.78124004 2136 Q07157 TJP1 Tight junction protein ZO-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19.646 19.258 3 2.1736E-16 26889 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 115.11 111.31 170890000 57656000 0 11775000 9238200 5618900 8045400 5751300 4453300 5573300 10148000 10259000 10903000 9224600 5825600 16423000 39436 2136 35201 329160;329161;329162;329163;329164;329165;329166;329167;329168;329169;329170;329171;329172;329173 260669;260670;260671;260672;260673;260674;260675;260676;260677;260678 260672 9 PAIAPPVFVFQK Unmodified 1312.7543 0.75434399 4428 Q9H6Z4 RANBP3 Ran-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.28 3.23 3 1 14 1 2 1 2 1 1 1 1 1 1 1 1 1 2 1 88.307 87.298 2 3.2459E-08 101233 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 127.46 116.94 405570000 56026000 62301000 3840100 11917000 10417000 24136000 14362000 17598000 12368000 26971000 28637000 28852000 18390000 25594000 64159000 39437 4428 35202 329174;329175;329176;329177;329178;329179;329180;329181;329182;329183;329184;329185;329186;329187;329188;329189;329190;329191 260679;260680;260681;260682;260683;260684;260685;260686;260687;260688;260689;260690;260691;260692 260680 11 PAIQELKPPTYK Unmodified 1383.7762 0.77620165 1997 P82650 MRPS22 28S ribosomal protein S22, mitochondrial yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 55.05 55.387 3 0.025637 62037 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.991 37.638 33462000 0 0 0 0 0 0 0 0 2606400 7313300 0 5135300 5871500 5500400 7035300 39438 1997 35203 329192;329193;329194;329195;329196;329197 260693 260693 0 PAIVEAGGMQALGK Oxidation (M) 1356.7071 0.7071358 1010 P14923 JUP Junction plakoglobin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.144 46.312 2 1.3349E-26 51918 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 153.11 126.59 242700000 0 0 0 44687000 9029100 20796000 9500900 72471000 9514300 14413000 11151000 15749000 21394000 5657800 8335600 39439 1010 35204 329198;329199;329200;329201;329202;329203;329204;329205;329206;329207;329208;329209 260694;260695;260696;260697;260698;260699;260700;260701;260702;260703;260704;260705;260706 260700 1397 11 PAIVEAGGMQALGK Unmodified 1340.7122 0.71222118 1010 P14923 JUP Junction plakoglobin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 64.046 63.867 2 0.00019311 73450 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 81.335 56.097 50614000 0 0 0 19371000 2141800 5668000 0 21820000 1612500 0 0 0 0 0 0 39440 1010 35204 329210;329211;329212;329213;329214 260707;260708;260709;260710;260711 260711 5 PALDLYQLSPSEVK Unmodified 1558.8243 0.82427405 3711 Q93100 PHKB Phosphorylase b kinase regulatory subunit beta yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By matching 9 2.65 1 7 1 1 1 1 1 1 1 1 82.011 81.537 2 4.6655E-18 101063 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 142.12 121.28 82052000 0 55608000 0 0 0 4922400 2155400 0 2242300 4304000 3613700 0 0 3190900 6015600 39441 3711 35205 329215;329216;329217;329218;329219;329220;329221;329222 260712;260713;260714 260713 1 PALEEEEAPR Unmodified 1139.5459 0.54586736 2690 Q4VC44 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.87 30.062 2 0.0014803 32252 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 106.42 92.915 60931000 0 0 0 6460800 2472100 3242200 4575900 5866200 2922700 3627100 6071400 5910700 6404700 6691600 6685500 39442 2690 35206 329223;329224;329225;329226;329227;329228;329229;329230;329231;329232;329233;329234 260715;260716;260717;260718;260719;260720;260721;260722;260723;260724;260725 260724 11 PALFPEPAK Unmodified 968.53312 0.53311783 3897 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 7 3.69 1 1 3 2 1 1 1 60.728 58.126 2 0.0066804 75058 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.83 81.309 60085000 0 43964000 0 0 0 0 7724200 0 8396700 0 0 0 0 0 0 39443 3897 35207 329235;329236;329237;329238;329239 260726;260727;260728;260729;260730;260731 260727 6 PALIPQPTFTEK Unmodified 1340.734 0.73400248 1797 P57740 NUP107 Nuclear pore complex protein Nup107 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 76.038 74.815 2 1.0126E-17 93391 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 154.56 146.91 732660000 14472000 377800000 5221400 16181000 20410000 30215000 0 19163000 19948000 32220000 33063000 36077000 33990000 32428000 61470000 39444 1797 35208 329240;329241;329242;329243;329244;329245;329246;329247;329248;329249;329250;329251;329252;329253;329254 260732;260733;260734;260735;260736;260737;260738;260739;260740;260741;260742;260743;260744;260745 260734 13 PALLHSTFFPALQGAQTK Unmodified 1926.0363 0.036332512 1155 P23381 WARS Tryptophan--tRNA ligase, cytoplasmic;T1-TrpRS;T2-TrpRS yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 83.011 83.12 3 1.6405E-07 95781 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.75 69.001 41276000 0 0 0 0 0 3836600 0 0 0 0 0 0 0 0 37440000 39445 1155 35209 329255;329256 260746;260747 260747 2 PALLSQIDAEFEK Unmodified 1459.7559 0.75586013 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 85.266 85.371 2 0.0036332 98916 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 52.79 37.25 3077000 0 0 0 0 0 0 0 0 0 3077000 0 0 0 0 0 39446 2361 35210 329257;329258 260748;260749 260748 2 PALPAGTEDTAK Unmodified 1169.5928 0.59281755 819 P06396;CON__Q3SX14 GSN Gelsolin yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.53 2.94 1 2 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 31.491 30.693 2 2.1052E-05 32493 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 109.42 95.416 + 454970000 290640 24453000 0 60728000 29889000 36778000 27602000 25456000 28196000 29664000 34417000 57102000 36603000 23306000 40491000 39447 819 35211 329259;329260;329261;329262;329263;329264;329265;329266;329267;329268;329269;329270;329271;329272;329273 260750;260751;260752;260753;260754;260755;260756;260757;260758;260759;260760;260761;260762;260763;260764;260765 260760 16 PALPLDQLQITHK Unmodified 1472.8351 0.83511351 4351 Q9H1I8 ASCC2 Activating signal cointegrator 1 complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 76.965 75.758 3 1.2639E-22 96985 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 147.87 139.96 135860000 31032000 14638000 8220200 4606600 0 0 6977800 8666900 0 8079100 12766000 9176100 10215000 8717800 12764000 39448 4351 35212 329274;329275;329276;329277;329278;329279;329280;329281;329282;329283;329284;329285;329286 260766;260767;260768;260769;260770;260771;260772;260773;260774;260775;260776;260777;260778;260779;260780 260771 15 PALPVSPAAR Unmodified 977.56581 0.56581494 4215 Q9BWU0 SLC4A1AP Kanadaptin yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 46.821 47.217 2 0.010944 52221 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 55.112 34.552 13351000 0 0 0 0 0 0 0 1884800 0 0 4102800 0 0 2555100 4808100 39449 4215 35213 329287;329288;329289;329290 260781;260782;260783 260783 3 PALPYLDVDMMDICK Oxidation (M) 1795.8195 0.81946472 5042 Q9UNS2 COPS3 COP9 signalosome complex subunit 3 yes yes 0 1 0 By MS/MS 2 0 1 1 93.302 88.391 3 0.002731 109754 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 50.843 33.904 13822000 0 13822000 0 0 0 0 0 0 0 0 0 0 0 0 0 39450 5042 35214 329291 260784 260784 6391 1 PALPYLDVDMMDICK Unmodified 1779.8246 0.8245501 5042 Q9UNS2 COPS3 COP9 signalosome complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 96.149 92.642 2 7.4048E-40 114500 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 171.05 129.05 106970000 0 104990000 1982200 0 0 0 0 0 0 0 0 0 0 0 0 39451 5042 35214 329292;329293;329294 260785;260786;260787;260788 260785 4 PALQAQPLR Unmodified 992.57671 0.57671398 4469 Q9H9B1 EHMT1 Histone-lysine N-methyltransferase EHMT1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.595 38.789 2 0.0051423 42887 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 82.305 51.801 124410000 0 0 0 7954300 6789700 0 8448500 8023000 7326200 13098000 18985000 15179000 12356000 8165100 18084000 39452 4469 35215 329295;329296;329297;329298;329299;329300;329301;329302;329303;329304;329305;329306 260789;260790;260791;260792;260793;260794;260795;260796;260797;260798;260799 260796 10 PALSEEERQEQTK Unmodified 1543.7478 0.74781464 2100 Q04323 UBXN1 UBX domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.81 2.8 3 1 22 1 2 1 2 1 2 2 2 1 2 2 2 2 2 2 16.665 16.265 2;3 2.8788E-21 21498 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.93 125.7 541610000 37530000 147290000 92810000 5622700 4243400 25457000 12389000 5385100 9805300 12425000 22960000 55932000 15409000 31563000 62793000 39453 2100 35216 329307;329308;329309;329310;329311;329312;329313;329314;329315;329316;329317;329318;329319;329320;329321;329322;329323;329324;329325;329326;329327;329328;329329;329330;329331;329332 260800;260801;260802;260803;260804;260805;260806;260807 260801 4 PALVASRVEVSK Unmodified 1254.7296 0.7295858 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 0 1 By MS/MS 2 0 1 1 48.961 41.135 3 0.01454 57015 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.536 60.731 161500000 161500000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39454 1300 35217 329333 260808 260808 0 PAMLHLPSEQGAPETLQR Oxidation (M) 1989.9942 0.9942097 5288 Q9Y6K9 IKBKG NF-kappa-B essential modulator yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 63.09 63.491 3 0.00039937 72555 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 47.754 41.632 24491000 0 0 0 0 0 0 0 0 3307500 0 0 12914000 0 0 8268600 39455 5288 35218 329334;329335;329336 260809;260810 260810 6696 2 PAMPMQQARPAQPQEHPFASSR Unmodified 2461.1743 0.17431611 2537 Q15437 SEC23B Protein transport protein Sec23B yes yes 0 0 1 By MS/MS 10 0 1 1 47.618 48.35 4 0.00028453 53524 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 27.961 21.009 14256000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14256000 39456 2537 35219 329337 260811 260811 1 PAMPQDSVPSPR Oxidation (M) 1296.6132 0.61323542 1714 P53396 ACLY ATP-citrate synthase yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.69 2.88 3 2 24 1 4 2 2 1 3 3 5 1 2 2 1 2 32.479 31.746 2;3 1.3146E-26 35329 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 167.09 158.62 1740500000 87708 124980000 0 37671000 73338000 66954000 247400000 241550000 679070000 56501000 63120000 135250000 4489100 0 10104000 39457 1714 35220 329338;329339;329340;329341;329342;329343;329344;329345;329346;329347;329348;329349;329350;329351;329352;329353;329354;329355;329356;329357;329358;329359;329360;329361;329362;329363;329364;329365;329366 260812;260813;260814;260815;260816;260817;260818;260819;260820;260821;260822;260823;260824;260825;260826;260827;260828;260829;260830;260831;260832;260833;260834;260835;260836;260837;260838;260839;260840;260841;260842 260824 2771 27 PAMPQDSVPSPR Unmodified 1280.6183 0.6183208 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.12 2.42 1 1 15 2 2 1 1 1 2 1 1 1 2 1 1 1 44.638 43.968 2;3 1.3789E-14 49580 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 155.06 137.82 3307400000 0 86220000 0 62141000 171120000 231420000 543230000 742810000 742500000 128500000 212410000 326820000 0 11275000 49003000 39458 1714 35220 329367;329368;329369;329370;329371;329372;329373;329374;329375;329376;329377;329378;329379;329380;329381;329382;329383 260843;260844;260845;260846;260847;260848;260849;260850;260851;260852;260853;260854;260855;260856;260857;260858;260859;260860;260861;260862;260863;260864;260865;260866;260867;260868;260869;260870;260871;260872;260873;260874 260846 32 PAMPQDSVPSPRSLQGK Oxidation (M) 1809.9043 0.90433206 1714 P53396 ACLY ATP-citrate synthase yes yes 0 1 1 By MS/MS 2 0 1 1 52.286 44.271 3 8.9022E-19 60812 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 115.38 108.98 38289000 38289000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39459 1714 35221 329384 260875 260875 2771 1 PAMPQDSVPSPRSLQGK Unmodified 1793.9094 0.90941744 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 60.237 54.197 3 0.00010229 72951 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.358 86.332 116280000 111430000 0 4849400 0 0 0 0 0 0 0 0 0 0 0 0 39460 1714 35221 329385;329386 260876 260876 0 PANAVLHK Unmodified 848.48684 0.48683634 2451;2201 Q12873;Q14839 CHD3;CHD4 Chromodomain-helicase-DNA-binding protein 3;Chromodomain-helicase-DNA-binding protein 4 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.56 3.86 3 1 5 1 2 1 1 1 1 1 1 11.203 9.8698 2 0.005686 15359 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 129.39 85.578 336700000 240730000 27806000 48140000 2291900 0 0 0 0 0 0 5396300 3892000 2921400 0 5521000 39461 2201;2451 35222 329387;329388;329389;329390;329391;329392;329393;329394;329395 260877;260878;260879;260880;260881;260882;260883 260880 7 PANEQSQDFSIHNEDFPALPGSSYK Unmodified 2777.2569 0.25690257 4779 Q9NZN8 CNOT2 CCR4-NOT transcription complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 79.065 78.624 3 9.5213E-109 90605 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 160.92 158.19 162850000 0 48785000 0 0 3499600 11263000 3782000 8853200 10758000 19572000 0 17772000 0 0 38564000 39462 4779 35223 329396;329397;329398;329399;329400;329401;329402;329403;329404;329405 260884;260885;260886;260887;260888;260889;260890;260891;260892;260893 260888 10 PANFLDLGGGVK Unmodified 1186.6346 0.63462279 3875 Q96I99 SUCLG2 Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 81.302 77.685 2 3.1244E-14 96571 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.66 121.15 54891000 0 50132000 4758700 0 0 0 0 0 0 0 0 0 0 0 0 39463 3875 35224 329406;329407 260894;260895;260896 260895 3 PANFLIVDGMLK Oxidation (M) 1332.7112 0.71115855 1331 P33981 TTK Dual specificity protein kinase TTK yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 80.939 81.008 2 1.8054E-05 93404 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 96.015 87.038 68813000 0 0 0 0 7174200 13804000 8167700 0 10089000 13007000 0 0 0 0 16570000 39464 1331 35225 329408;329409;329410;329411;329412;329413 260897;260898;260899;260900;260901;260902;260903;260904 260902 1991 8 PANFLIVDGMLK Unmodified 1316.7162 0.71624393 1331 P33981 TTK Dual specificity protein kinase TTK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 88.666 88.768 2 2.2105E-06 102814 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 129.7 117.66 35772000 0 0 0 0 1070800 3567300 0 3075000 2744300 4069700 3081100 3147600 1132500 2377300 11507000 39465 1331 35225 329414;329415;329416;329417;329418;329419;329420;329421;329422;329423 260905;260906;260907;260908;260909;260910;260911;260912;260913 260907 9 PANKQEDEVMR Unmodified 1315.619 0.61904908 258 O15145 ARPC3 Actin-related protein 2/3 complex subunit 3 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.259 13.414 3 0.0048689 12024 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.475 27.088 48477000 0 0 0 4606400 2353800 1242300 4071800 3647800 1290300 3154000 6010200 6563100 3065200 3775800 8696700 39466 258 35226 329424;329425;329426;329427;329428;329429;329430;329431;329432;329433;329434;329435 260914 260914 1 PANMLER Oxidation (M) 845.40654 0.40653711 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 2 2 2 2 1 2 2 10.211 10.376 2 0.015274 8582 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 102.77 67.573 1915200000 0 0 0 2298800 2513200 0 133520000 116040000 113910000 402450000 220890000 915230000 0 0 8334800 39467 4226 35227 329436;329437;329438;329439;329440;329441;329442;329443;329444;329445;329446;329447;329448;329449;329450 260915;260916;260917;260918;260919;260920;260921;260922;260923;260924 260922 5696 10 PANMLER Unmodified 829.41162 0.41162248 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 23.724 24.129 2 0.023411 24711 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 91.906 61.238 3900800000 0 0 0 0 0 0 0 293210000 0 619540000 1462800000 1479200000 11928000 9585400 24530000 39468 4226 35227 329451;329452;329453;329454;329455;329456;329457 260925;260926;260927;260928;260929 260928 5 PANSVFTTK Unmodified 963.50255 0.50254598 3073 Q7Z2W4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 2 1 1 28.815 28.974 2 0.0027704 31223 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 137.13 104.52 104360000 0 0 0 0 10242000 12026000 11243000 16264000 11637000 13004000 12529000 17418000 0 0 0 39469 3073 35228 329458;329459;329460;329461;329462;329463;329464;329465;329466;329467;329468 260930;260931;260932;260933;260934;260935;260936;260937;260938;260939;260940;260941;260942;260943 260933 14 PANVFITATGVVK Unmodified 1315.75 0.7499869 3508 Q8TDX7;Q9HC98 NEK7;NEK6 Serine/threonine-protein kinase Nek7;Serine/threonine-protein kinase Nek6 yes no 0 0 0 By MS/MS 2 0 1 1 82.842 74.712 2 0.0048564 97812 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.385 51.743 6324500 6324500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39470 3508 35229 329469 260944 260944 1 PAPAATYER Unmodified 974.48214 0.48214489 617 O95059 RPP14 Ribonuclease P protein subunit p14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 19.126 19.325 2 0.012702 19838 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 60.91 45.278 66951000 0 0 0 4779400 4544000 5238500 3696400 3594600 2871100 0 9000600 9496800 7156900 6599900 9972600 39471 617 35230 329470;329471;329472;329473;329474;329475;329476;329477;329478;329479;329480 260945;260946;260947;260948;260949;260950 260950 6 PAPAATYERVVYK Unmodified 1463.7773 0.77726428 617 O95059 RPP14 Ribonuclease P protein subunit p14 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 54.061 48.103 3 0.001666 65913 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.705 62.156 101200000 88172000 10272000 2760200 0 0 0 0 0 0 0 0 0 0 0 0 39472 617 35231 329481;329482;329483 260951;260952 260951 2 PAPAVGEAEDK Unmodified 1082.5244 0.52440364 1044 P16989 YBX3 Y-box-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.23 19.426 2 1.986E-05 19667 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 129.63 108.93 408100000 0 0 0 27836000 26755000 31152000 25468000 20738000 18997000 38743000 35358000 51915000 48085000 35425000 47629000 39473 1044 35232 329484;329485;329486;329487;329488;329489;329490;329491;329492;329493;329494;329495 260953;260954;260955;260956;260957;260958;260959;260960;260961;260962;260963;260964;260965 260962 13 PAPAVVSVTPAVK Unmodified 1234.7285 0.72852317 3775 Q96CB8 INTS12 Integrator complex subunit 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 59.221 58.871 2 0.0014319 66099 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 63.32 58.38 148520000 0 62773000 0 4202400 6294400 7138100 6554200 6869500 5878400 8208400 7876900 9373200 5470700 6583500 11298000 39474 3775 35233 329496;329497;329498;329499;329500;329501;329502;329503;329504;329505;329506;329507;329508 260966;260967;260968;260969;260970;260971;260972;260973;260974;260975;260976;260977 260973 12 PAPCAPSLPQFSAPPPPLK Unmodified 1971.0288 0.028804293 3025 Q70E73 RAPH1 Ras-associated and pleckstrin homology domains-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 84.232 84.402 3 0.0013022 97550 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.422 35.579 24809000 0 0 0 0 0 0 0 7723400 0 0 0 8596300 0 0 8489800 39475 3025 35234 329509;329510;329511 260978;260979 260978 2 PAPDETSFSEALLK Unmodified 1503.7457 0.74568938 2206 Q12905 ILF2 Interleukin enhancer-binding factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 78.317 77.48 2 1.1387E-16 89268 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 122.7 106.69 281570000 0 137440000 0 0 4943400 27385000 0 0 12891000 23293000 13947000 0 23972000 0 37694000 39476 2206 35235 329512;329513;329514;329515;329516;329517;329518;329519;329520;329521;329522;329523;329524;329525 260980;260981;260982;260983;260984;260985;260986;260987;260988;260989;260990;260991;260992 260984 13 PAPEASSLEEPHSPETGEK Unmodified 1990.912 0.91197944 2737 Q5JTC6 AMER1 APC membrane recruitment protein 1 yes yes 0 0 0 By MS/MS 3 0 1 1 42.47 37.732 3 0.00050835 46899 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 54.805 45.641 4189300 0 4189300 0 0 0 0 0 0 0 0 0 0 0 0 0 39477 2737 35236 329526 260993 260993 1 PAPFFVLDEIDAALDNTNIGK Unmodified 2259.1423 0.14231373 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 102.57 96.721 3 4.8921E-05 122142 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.26 55.78 32557000 28593000 3963600 0 0 0 0 0 0 0 0 0 0 0 0 0 39478 2431 35237 329527;329528 260994;260995 260995 2 PAPGAVNVPAAGSHLGQGK Unmodified 1726.9115 0.91146635 4755 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 46.898 47.139 3 0.00041951 53015 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 37.009 29.435 57783000 0 0 0 0 2732100 8339000 3639000 0 6203300 7049800 6996600 5413300 4724800 3871900 8813300 39479 4755 35238 329529;329530;329531;329532;329533;329534;329535;329536;329537;329538;329539 260996;260997;260998;260999 260996 4 PAPGDLAYPDK Unmodified 1142.5608 0.56078914 3890 Q96JB2 COG3 Conserved oligomeric Golgi complex subunit 3 yes yes 0 0 0 By MS/MS 2 0 1 1 47.436 41.873 2 0.0051161 54647 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.228 60.857 28832000 0 28832000 0 0 0 0 0 0 0 0 0 0 0 0 0 39480 3890 35239 329540 261000 261000 1 PAPGYTPNVVVGQVPPGTNHISK Unmodified 2328.2226 0.22262973 5052 Q9UPN9 TRIM33 E3 ubiquitin-protein ligase TRIM33 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 69.072 68.256 3 1.3327E-08 77640 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.963 53.462 55976000 9213200 0 0 0 4683200 6420400 6430700 3884800 4282600 5944300 0 0 0 7357400 7759700 39481 5052 35240 329541;329542;329543;329544;329545;329546;329547;329548;329549 261001;261002;261003;261004;261005;261006;261007;261008 261003 7 PAPHLFAQLSK Unmodified 1207.6713 0.67134264 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 59.264 59.436 3 0.016261 67455 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 40.616 29.516 88742000 0 0 0 6094300 0 12232000 0 9822700 6978100 8821900 1600300 8098600 8857300 7136600 19101000 39482 19 35241 329550;329551;329552;329553;329554;329555;329556;329557;329558;329559 261009;261010;261011;261012 261009 2 PAPIEQEPSK Unmodified 1094.5608 0.56078914 1580 P49591 SARS Serine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.81 2 1 2 10 2 3 1 1 1 1 1 1 1 1 1 1 32.903 32.648 2 4.4416E-11 102393 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 162.59 90.548 380210000 8937000 174540000 0 0 6336600 0 7607000 7056200 8345200 12571000 27424000 27597000 12243000 25540000 62016000 39483 1580 35242 329560;329561;329562;329563;329564;329565;329566;329567;329568;329569;329570;329571;329572;329573;329574 261013;261014;261015;261016;261017;261018;261019;261020;261021;261022;261023 261020 10 PAPIEQEPSKK Unmodified 1222.6558 0.65575216 1580 P49591 SARS Serine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 5.71 3.73 2 2 3 4 1 1 1 15.72 13.755 2;3 0.00030995 17263 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 103.91 79.444 131840000 0 104080000 0 0 8477800 0 7321400 0 0 0 11966000 0 0 0 0 39484 1580 35243 329575;329576;329577;329578;329579;329580;329581 261024;261025;261026;261027;261028 261026 2 PAPLLESPFK Unmodified 1097.6121 0.61209643 128 O00203 AP3B1 AP-3 complex subunit beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 77.972 76.845 2 7.423E-06 96189 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.42 105.27 1781600000 227570000 823080000 108640000 24446000 24347000 51852000 39085000 46381000 39055000 57365000 66435000 68104000 54564000 52676000 97983000 39485 128 35244 329582;329583;329584;329585;329586;329587;329588;329589;329590;329591;329592;329593;329594;329595;329596;329597 261029;261030;261031;261032;261033;261034;261035;261036;261037;261038;261039;261040;261041;261042;261043;261044 261032 16 PAPLNTFLSIK Unmodified 1199.6914 0.69140938 2818 Q5VUA4 ZNF318 Zinc finger protein 318 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 84.401 84.468 2 0.0044032 97472 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.56 43.934 34818000 0 0 0 0 2992800 5174300 0 4210900 0 5075400 0 0 3792500 4469700 9102600 39486 2818 35245 329598;329599;329600;329601;329602;329603;329604 261045;261046;261047;261048;261049;261050;261051 261047 7 PAPLPLSPGK Unmodified 975.57532 0.57531699 2070 Q02086 SP2 Transcription factor Sp2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 52.757 52.995 2 0.003407 58743 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.605 38.282 151350000 0 0 0 0 4792000 0 6122900 5342500 24098000 0 17717000 17428000 25281000 21264000 29309000 39487 2070 35246 329605;329606;329607;329608;329609;329610;329611;329612;329613;329614 261052;261053;261054;261055;261056;261057 261053 6 PAPLTGTLEVR Unmodified 1152.6503 0.65027285 2603 Q16512 PKN1 Serine/threonine-protein kinase N1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.666 61.766 2 0.0020604 69510 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.338 66.187 86688000 0 0 0 4333600 4609500 8204100 6126500 4724100 4318800 7703500 9118300 10002000 8063800 6552300 12932000 39488 2603 35247 329615;329616;329617;329618;329619;329620;329621;329622;329623;329624;329625;329626 261058;261059;261060;261061 261059 4 PAPPAPPPPQNLQPESDAPQQPGSSPR Unmodified 2756.3518 0.351806 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 2 1 1 1 2 2 1 2 2 2 1 61.503 61.605 3;4 1.7182E-85 69525 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 89.197 85.126 197780000 0 0 0 11877000 15416000 10527000 9074400 12926000 17409000 17475000 19015000 25622000 20087000 22539000 15811000 39489 5262 35248 329627;329628;329629;329630;329631;329632;329633;329634;329635;329636;329637;329638;329639;329640;329641;329642;329643;329644 261062;261063;261064;261065;261066;261067;261068;261069;261070;261071;261072;261073;261074;261075;261076;261077;261078;261079;261080 261072 19 PAPPKPEPKPK Unmodified 1184.6917 0.69174374 805 P05204 HMGN2 Non-histone chromosomal protein HMG-17 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 9.749 9.8803 3 0.00021121 6121 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 110.38 102.15 137440000 0 0 0 7162000 2997700 1271000 17790000 3426300 1319000 2630800 33783000 24641000 2865400 12412000 27143000 39490 805 35249 329645;329646;329647;329648;329649;329650;329651;329652;329653;329654;329655;329656 261081;261082;261083;261084;261085 261083 1 PAPPLDTDR Unmodified 980.49271 0.49270958 1556 P49005 POLD2 DNA polymerase delta subunit 2 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS 10 0 4 1 1 1 1 28.192 28.51 2 0.0034522 30014 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 94.302 57.282 20308000 0 0 0 0 0 0 0 4167100 0 0 2299100 0 0 13842000 0 39491 1556 35250 329657;329658;329659;329660 261086;261087 261086 2 PAPPPPPAASAGK Unmodified 1156.6241 0.6240581 731 P00519 ABL1 Tyrosine-protein kinase ABL1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 26.869 27.1 2 0.0083978 28790 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 44.57 12.1 79537000 0 0 0 4037500 5682800 0 6577000 0 0 10524000 13580000 12686000 8255500 6771800 11422000 39492 731 35251 329661;329662;329663;329664;329665;329666;329667;329668;329669 261088;261089;261090;261091;261092;261093 261090 6 PAPPPQSQSPEVEQLGR Unmodified 1815.9115 0.91152593 1707 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 49.624 49.788 3 0.00027419 56184 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 59.421 55.902 51614000 0 0 0 0 0 14000000 12999000 0 0 0 0 0 15279000 9335800 0 39493 1707 35252 329670;329671;329672;329673;329674;329675 261094;261095;261096;261097 261095 4 PAPPPTIEEK Unmodified 1077.5706 0.57062555 1074 P18583 SON Protein SON yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS 10 0 5 1 1 1 1 1 30.644 30.859 2 0.036868 33477 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 41.029 24.885 12569000 0 0 0 0 964040 0 0 0 1306800 0 0 0 4554700 3077900 2665200 39494 1074 35253 329676;329677;329678;329679;329680 261098 261098 1 PAPQMNGSTGDAR Unmodified 1300.583 0.58299792 4762 Q9NZB2 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 17.069 17.268 2 0.0012213 17194 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 64.297 55.765 11322000 0 0 0 979010 1005200 0 0 0 0 1276900 1671000 2457100 1833800 2098700 0 39495 4762 35254 329681;329682;329683;329684;329685;329686;329687;329688 261099;261100;261101;261102;261103;261104;261105 261103 7 PAPQMNGSTGDARAPSHSESALNNDSK Unmodified 2738.2314 0.23143287 4762 Q9NZB2 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 34.304 30.997 4 6.1553E-06 39153 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 39.883 37.442 3492100 0 0 3492100 0 0 0 0 0 0 0 0 0 0 0 0 39496 4762 35255 329689 261106 261106 1 PAPQSSENAGTSDLELPVSQR Unmodified 2182.0502 0.050204255 2776 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 64.72 64.807 2;3 9.3475E-06 74581 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 82.55 75.18 125870000 0 0 0 6729700 7037900 7814700 8389900 6563600 7525900 10673000 13296000 17742000 10892000 10819000 18386000 39497 2776 35256 329690;329691;329692;329693;329694;329695;329696;329697;329698;329699;329700;329701;329702;329703;329704;329705;329706;329707;329708;329709;329710;329711;329712;329713 261107;261108;261109 261109 2 PAPSGGASGDLR Unmodified 1083.5309 0.530886 1531 P47974 ZFP36L2 Zinc finger protein 36, C3H1 type-like 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 24.886 25.09 2 0.02278 26629 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 39.305 18.851 39201000 0 0 0 0 2976400 9370200 0 0 3155900 5855400 3338700 0 0 2627300 11877000 39498 1531 35257 329714;329715;329716;329717;329718;329719;329720 261110;261111;261112 261111 3 PAPSGLPSERK Unmodified 1137.6142 0.6142217 3315 Q8N201 INTS1 Integrator complex subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 21.421 20.516 3 0.0068698 20724 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 42.336 11.268 123550000 35921000 7821800 0 13259000 255440 0 6437500 0 0 12352000 19355000 0 0 14106000 14047000 39499 3315 35258 329721;329722;329723;329724;329725;329726;329727;329728;329729 261113;261114;261115;261116;261117;261118 261114 6 PAPSPEPCMPNTALLIK Unmodified 1834.9321 0.93212672 4888 Q9UGR2 ZC3H7B Zinc finger CCCH domain-containing protein 7B yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 85.986 81.211 2 0.0050963 94308 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 46.592 31.902 27669000 0 27669000 0 0 0 0 0 0 0 0 0 0 0 0 0 39500 4888 35259 329730;329731 261119;261120 261120 2 PAPYDQLIIDGLLSK Unmodified 1641.8978 0.89777335 3316 Q8N2W9 PIAS4 E3 SUMO-protein ligase PIAS4 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 94.857 94.99 2 0.0087135 110211 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.68 33.726 3965900 0 0 0 0 0 0 0 0 0 1718900 0 0 0 0 2246900 39501 3316 35260 329732;329733 261121;261122 261122 2 PAPYWEGTAVIDGEFK Unmodified 1778.8516 0.85155143 2245 Q13162 PRDX4 Peroxiredoxin-4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.1 0.3 9 1 2 6 2 89.111 84.242 2;3 3.4001E-91 105508 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 211.26 172.12 1258100000 164360000 1021800000 72009000 0 0 0 0 0 0 0 0 0 0 0 0 39502 2245 35261 329734;329735;329736;329737;329738;329739;329740;329741;329742;329743 261123;261124;261125;261126;261127;261128;261129;261130;261131;261132;261133;261134;261135 261124 10 PAQASHTNYLLMR Unmodified 1500.7507 0.75073195 2189 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 49.135 49.406 3 0.00036583 55853 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 72.496 64.772 20782000 0 0 0 0 0 0 0 0 0 0 0 0 10522000 10260000 0 39503 2189 35262 329744;329745 261136;261137 261137 2 PAQDPLYDVPNASGGQAGGPQRPGR Unmodified 2504.2156 0.21564687 2340 Q13671 RIN1 Ras and Rab interactor 1 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 2 1 1 1 1 1 1 58.057 58.245 3 1.6425E-23 65599 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.606 66.458 101670000 0 0 0 0 6652700 11830000 7787100 10296000 5114600 9939200 9782600 8570200 9195400 8667400 13832000 39504 2340 35263 329746;329747;329748;329749;329750;329751;329752;329753;329754;329755;329756;329757 261138;261139;261140;261141;261142;261143;261144;261145;261146;261147;261148;261149;261150;261151 261143 13 PAQIRFSNISAAK Unmodified 1401.7728 0.7728476 1642 P50991 CCT4 T-complex protein 1 subunit delta yes yes 0 0 1 By MS/MS 2 0 1 1 61.027 52.786 3 0.0002535 71541 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.253 82.866 40770000 40770000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39505 1642 35264 329758 261152 261152 0 PAQLGTQR Unmodified 869.47191 0.47191456 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 10.285 10.488 2 0.010849 8570 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 78.324 35.323 22848000 0 0 0 0 585760 0 0 0 0 0 8899400 13362000 0 0 0 39506 4285 35265 329759;329760;329761 261153;261154 261153 2 PAQPQEHPFASSR Unmodified 1450.6953 0.69532556 2537 Q15437 SEC23B Protein transport protein Sec23B yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 23.106 23.308 3 0.0047556 23500 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.999 26.863 42285000 0 0 0 0 3166600 5633300 3837800 4603300 0 5027000 4226000 0 3690300 5281700 6819400 39507 2537 35266 329762;329763;329764;329765;329766;329767;329768;329769;329770 261155;261156;261157 261156 3 PAQVSQPFR Unmodified 1028.5403 0.54032847 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.437 34.62 2 0.0033925 37975 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 105.14 67.002 468280000 0 0 0 22509000 22459000 32706000 30673000 26878000 25757000 40464000 93639000 52072000 35381000 34026000 51711000 39508 5216 35267 329771;329772;329773;329774;329775;329776;329777;329778;329779;329780;329781;329782 261158;261159;261160;261161;261162;261163;261164;261165;261166;261167;261168 261162 11 PARPVTVYSISLQK Unmodified 1557.8879 0.88787736 3572 Q8WWH5 TRUB1 Probable tRNA pseudouridine synthase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 63.278 63.442 3 0.0010307 71639 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.53 47.177 88780000 0 0 0 0 2739700 16276000 6572900 0 4777600 6376100 5683900 14054000 7719800 7498200 17082000 39509 3572 35268 329783;329784;329785;329786;329787;329788;329789;329790;329791;329792 261169;261170;261171;261172;261173;261174;261175;261176 261172 8 PASAPASRSGSK Unmodified 1114.5731 0.57308516 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 0 1 By MS/MS 2 0 1 1 5.5935 2.2161 2 5.2717E-12 5060 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 128.51 69.164 42746000 42746000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39510 1226 35269 329793 261177 261177 1 PASESCPPESDTHMTLPLSSVHCSVSDQTSK Unmodified 3370.4752 0.4751699 3978 Q96RU2 USP28 Ubiquitin carboxyl-terminal hydrolase 28 yes yes 0 0 0 By MS/MS 2 0 1 1 71.585 68.302 4 0.023086 83940 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 19.379 17.654 3345000 0 0 3345000 0 0 0 0 0 0 0 0 0 0 0 0 39511 3978 35270 329794 261178 261178 1 PASFMTSICDER Oxidation (M) 1428.6014 0.6013501 1714 P53396 ACLY ATP-citrate synthase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 18 2 2 2 2 2 2 1 2 2 1 47.266 47.413 2 8.0933E-09 53744 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 138.22 133.57 584090000 0 0 0 6705000 33818000 56524000 102050000 82844000 160920000 16528000 51454000 70098000 0 0 3151200 39512 1714 35271 329795;329796;329797;329798;329799;329800;329801;329802;329803;329804;329805;329806;329807;329808;329809;329810;329811;329812 261179;261180;261181;261182;261183;261184;261185;261186;261187;261188;261189;261190;261191;261192;261193 261188 2778 13 PASFMTSICDER Unmodified 1412.6064 0.60643548 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 64.945 65.014 2 7.3163E-205 74290 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 239.93 235.78 648730000 0 0 0 11991000 34172000 51864000 88884000 128610000 195580000 26639000 43129000 56443000 0 0 11415000 39513 1714 35271 329813;329814;329815;329816;329817;329818;329819;329820;329821;329822;329823 261194;261195;261196;261197;261198;261199;261200;261201;261202;261203;261204;261205;261206;261207;261208;261209;261210 261197 17 PASGCEAETQTEELK Unmodified 1648.725 0.72503029 954 P11717 IGF2R Cation-independent mannose-6-phosphate receptor yes yes 0 0 0 By MS/MS 10 0 1 1 29.829 29.983 2 0.038421 32509 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 42.743 42.743 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39514 954 35272 329824 261211 261211 1 PASGPIRPIVR Unmodified 1161.6982 0.6982261 1203 P26373 RPL13 60S ribosomal protein L13 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.626 37.805 3 0.0048686 42427 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 58.37 51.482 367040000 0 0 0 22457000 21120000 28817000 27449000 26964000 17492000 34954000 36829000 41632000 35098000 35915000 38319000 39515 1203 35273 329825;329826;329827;329828;329829;329830;329831;329832;329833;329834;329835;329836 261212;261213;261214;261215;261216;261217 261217 3 PASISEEELLNLINK Unmodified 1668.8934 0.89341625 993 P13995 MTHFD2 Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial;NAD-dependent methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 95.292 91.634 2 3.0689E-187 113514 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 308.55 276.29 63015000 0 62004000 1011400 0 0 0 0 0 0 0 0 0 0 0 0 39516 993 35274 329837;329838 261218 261218 1 PASLPPASQASNHRDPR Unmodified 1799.9027 0.90269258 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 2 1 2 2 2 2 1 22.517 22.801 3;4 0.038226 23221 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 26.781 17.376 111790000 0 0 0 0 0 12577000 0 8126400 11288000 16166000 13250000 48836000 0 1551100 0 39517 4139 35275 329839;329840;329841;329842;329843;329844;329845;329846;329847;329848;329849;329850 261219;261220 261219 1 PASLSLLSK Unmodified 914.54368 0.54368251 496 O75419 CDC45 Cell division control protein 45 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 58.425 58.577 2 0.014025 66703 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 58.916 21.941 45073000 0 0 0 0 3830800 3299800 4346900 5169300 2016700 4418700 6932300 0 3603600 3815400 7639600 39518 496 35276 329851;329852;329853;329854;329855;329856;329857;329858;329859;329860;329861 261221;261222;261223;261224;261225;261226;261227;261228 261226 8 PASPEAGNTLR Unmodified 1111.5622 0.56218613 4947 Q9UJX6 ANAPC2 Anaphase-promoting complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 2 1 1 1 21.779 22.165 2 0.0020981 23092 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 69.276 45.054 19131000 0 0 0 0 0 0 0 0 0 5790700 0 0 5069700 0 8270900 39519 4947 35277 329862;329863;329864;329865;329866 261229;261230;261231;261232;261233;261234 261229 6 PASPEAGNTLRR Unmodified 1267.6633 0.66329715 4947 Q9UJX6 ANAPC2 Anaphase-promoting complex subunit 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 17.829 18.006 3 0.0016246 18260 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 45.915 21.624 39849000 0 0 0 0 4046200 3872200 1809300 4564800 2455900 3768500 0 5992200 6655100 0 6684400 39520 4947 35278 329867;329868;329869;329870;329871;329872;329873;329874;329875 261235;261236;261237;261238;261239;261240 261235 6 PASPIGGPTQEEK Unmodified 1309.6514 0.65139506 3915 Q96L91 EP400 E1A-binding protein p400 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 30.114 30.288 2 0.00082789 33198 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 84.658 63.788 73668000 0 0 0 9219500 9045400 0 11460000 0 0 0 0 16491000 0 12596000 14855000 39521 3915 35279 329876;329877;329878;329879;329880;329881;329882 261241;261242;261243;261244;261245;261246;261247 261247 5 PASPTPVIVASHTANK Unmodified 1588.8573 0.85730551 1358 P35606 COPB2 Coatomer subunit beta' yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.56 3.62 4 1 11 2 2 1 1 1 1 1 1 1 1 1 1 1 1 44.207 42.322 2;3 2.9011E-48 53274 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 160.05 129.71 586620000 282580000 119300000 45398000 0 7736800 14922000 8002600 7712100 12521000 15595000 17493000 0 15143000 13406000 26809000 39522 1358 35280 329883;329884;329885;329886;329887;329888;329889;329890;329891;329892;329893;329894;329895;329896;329897;329898 261248;261249;261250;261251;261252;261253;261254;261255;261256;261257;261258;261259;261260;261261;261262;261263;261264 261256 17 PASSAEINHSFTPGLGK Unmodified 1711.8529 0.85294842 4244 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 yes yes 0 0 0 By MS/MS By matching By MS/MS 2 0 3 1 1 1 58.739 52.76 3 8.1783E-05 71513 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.018 59.625 41650000 17684000 18835000 5130800 0 0 0 0 0 0 0 0 0 0 0 0 39523 4244 35281 329899;329900;329901 261265;261266 261265 1 PASSSFGSEAK Unmodified 1066.4931 0.49310351 5211 Q9Y4W2 LAS1L Ribosomal biogenesis protein LAS1L yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.488 15.657 2 7.4121E-06 14195 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 140.45 112.02 202820000 0 0 0 7224300 7604800 8057000 9113500 10408000 6903500 16915000 22282000 24953000 32294000 27045000 30017000 39524 5211 35282 329902;329903;329904;329905;329906;329907;329908;329909;329910;329911;329912;329913 261267;261268;261269;261270;261271;261272;261273;261274;261275;261276;261277;261278;261279 261274 11 PASSSLPSSPPPQLLTR Unmodified 1733.9312 0.93119874 4023 Q99567 NUP88 Nuclear pore complex protein Nup88 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 72.167 72.238 2;3 1.4527E-31 82741 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 152.85 152.85 566970000 0 0 0 23256000 30756000 42278000 37873000 57349000 28663000 53315000 49167000 67657000 53304000 53906000 69443000 39525 4023 35283 329914;329915;329916;329917;329918;329919;329920;329921;329922;329923;329924;329925;329926;329927;329928;329929;329930;329931;329932;329933;329934;329935;329936;329937 261280;261281;261282;261283;261284;261285;261286;261287;261288;261289;261290;261291;261292;261293;261294;261295 261288 14 PASSTEENCLEFQESFK Unmodified 2001.8626 0.86258641 3196 Q86XK3 SFR1 Swi5-dependent recombination DNA repair protein 1 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 73.673 68.128 2 2.1074E-07 86147 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.95 122.51 29152000 0 29152000 0 0 0 0 0 0 0 0 0 0 0 0 0 39526 3196 35284 329938 261296;261297 261296 2 PASTMGMGPLGK 2 Oxidation (M) 1177.5471 0.54712969 2289 Q13428 TCOF1 Treacle protein yes yes 0 2 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20.871 20.241 2 8.0696E-06 21061 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 93.098 68.223 350180000 18818000 69738000 3166300 17275000 16082000 18198000 18222000 17524000 18638000 23960000 30396000 39573000 23615000 13608000 21367000 39527 2289 35285 329939;329940;329941;329942;329943;329944;329945;329946;329947;329948;329949;329950;329951;329952;329953 261298;261299;261300;261301;261302;261303;261304;261305;261306;261307;261308;261309;261310;261311;261312;261313;261314;261315 261304 3727;3728 16 PASTMGMGPLGK Oxidation (M) 1161.5522 0.55221507 2289 Q13428 TCOF1 Treacle protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 4 18 2 2 2 1 2 2 2 2 3 1 1 2 35.556 34.971 2 3.1738E-10 42033 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.71 106.61 319860000 33850000 148560000 0 0 7233900 0 5371000 12839000 7560100 16158000 19525000 30733000 10774000 6749600 20512000 39528 2289 35285 329954;329955;329956;329957;329958;329959;329960;329961;329962;329963;329964;329965;329966;329967;329968;329969;329970;329971;329972;329973;329974;329975 261316;261317;261318;261319;261320;261321;261322;261323;261324;261325;261326;261327;261328;261329;261330;261331;261332;261333;261334;261335;261336 261319 3727;3728 17 PASTMGMGPLGK Unmodified 1145.5573 0.55730044 2289 Q13428 TCOF1 Treacle protein yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 57.89 49.685 2 0.033557 56041 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.375 45.582 115230000 115230000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39529 2289 35285 329976;329977 261337;261338;261339 261337 3 PASTNSDDVRDEK Unmodified 1432.643 0.64301522 947 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.39 3.7 10 2 24 3 7 2 2 2 2 2 2 2 2 2 2 2 2 2 7.3 6.3215 2;3 4.3906E-271 4529 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 203.74 171.75 4075200000 204850000 2986900000 49766000 26166000 19017000 51421000 26578000 31970000 28194000 65993000 166680000 66176000 40431000 68227000 242780000 39530 947 35286 329978;329979;329980;329981;329982;329983;329984;329985;329986;329987;329988;329989;329990;329991;329992;329993;329994;329995;329996;329997;329998;329999;330000;330001;330002;330003;330004;330005;330006;330007;330008;330009;330010;330011;330012;330013 261340;261341;261342;261343;261344;261345;261346;261347;261348;261349;261350;261351;261352;261353;261354;261355;261356;261357;261358;261359;261360;261361;261362;261363;261364 261350 19 PASTPWGSK Unmodified 929.46068 0.46068117 3655 Q92747 ARPC1A Actin-related protein 2/3 complex subunit 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 33.59 28.848 2 0.016312 38258 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 111.74 82.363 193700000 56420000 135420000 1863000 0 0 0 0 0 0 0 0 0 0 0 0 39531 3655 35287 330014;330015;330016 261365 261365 0 PASVSAPR Unmodified 783.4239 0.42390173 992 P13984 GTF2F2 General transcription factor IIF subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 18 1 2 1 2 2 2 2 1 2 2 1 13.809 13.935 2 0.0060433 12503 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 104.21 18.944 299050000 0 0 0 16613000 22411000 20135000 20530000 23024000 22096000 32369000 11438000 0 35481000 30027000 64931000 39532 992 35288 330017;330018;330019;330020;330021;330022;330023;330024;330025;330026;330027;330028;330029;330030;330031;330032;330033;330034 261366;261367;261368;261369;261370;261371;261372;261373;261374 261368 5 PASVSSPEPPK Unmodified 1094.5608 0.56078914 3897 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 25.335 25.623 2 7.2584E-06 25947 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 128.28 85.994 71317000 0 0 0 0 0 12141000 0 9416200 6472200 9282400 8285400 11715000 6961100 7044000 0 39533 3897 35289 330035;330036;330037;330038;330039;330040;330041;330042;330043 261375;261376;261377;261378;261379;261380;261381;261382;261383;261384;261385 261378 11 PASWADIASK Unmodified 1044.524 0.52400971 5227 Q9Y5A9 YTHDF2 YTH domain-containing family protein 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54.18 53.61 2 0.0012265 60457 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 108.57 62.441 401290000 0 62002000 1896300 14659000 9989400 24152000 19226000 15810000 22582000 49712000 40239000 26654000 29088000 31510000 53772000 39534 5227 35290 330044;330045;330046;330047;330048;330049;330050;330051;330052;330053;330054;330055;330056;330057 261386;261387;261388;261389;261390;261391;261392;261393;261394;261395;261396;261397;261398;261399;261400;261401;261402 261396 17 PATAAVPTSQSVK Unmodified 1255.6772 0.67721588 4979 Q9UKY1 ZHX1 Zinc fingers and homeoboxes protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 30.244 30.433 2 2.111E-11 32932 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 145.46 116.66 222620000 0 0 0 12941000 12834000 19902000 15657000 10018000 18859000 21719000 18941000 22975000 17744000 17187000 33846000 39535 4979 35291 330058;330059;330060;330061;330062;330063;330064;330065;330066;330067;330068;330069;330070 261403;261404;261405;261406;261407;261408;261409;261410;261411;261412;261413;261414;261415;261416;261417;261418;261419 261404 16 PATAIGVIGNFTDAER Unmodified 1630.8315 0.83148469 1328 P33176 KIF5B Kinesin-1 heavy chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 81.984 82.046 2;3 2.7835E-31 94561 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 147.26 128.52 653390000 0 0 0 16942000 25963000 65405000 28706000 40593000 46243000 70922000 62593000 70716000 33975000 47811000 143520000 39536 1328 35292 330071;330072;330073;330074;330075;330076;330077;330078;330079;330080;330081;330082;330083;330084;330085;330086;330087;330088;330089;330090;330091;330092;330093;330094 261420;261421;261422;261423;261424;261425;261426;261427;261428;261429;261430;261431;261432;261433;261434;261435;261436;261437;261438;261439;261440;261441;261442;261443 261428 21 PATALCGVVSADGK Unmodified 1344.6708 0.6707503 2647 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 3 1 1 1 1 1 1 1 1 1 1 1 1 1 52.039 51.185 2 2.4959E-29 64757 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.45 123.19 729630000 0 473350000 4300300 8222100 9189900 18627000 11380000 12468000 18216000 29811000 32387000 30062000 22370000 23835000 35406000 39537 2647 35293 330095;330096;330097;330098;330099;330100;330101;330102;330103;330104;330105;330106;330107;330108;330109;330110 261444;261445;261446;261447;261448;261449;261450;261451;261452;261453;261454;261455;261456;261457;261458;261459;261460;261461;261462;261463 261447 20 PATEVDPTHFEK Unmodified 1369.6514 0.65139506 1159 P23458 JAK1 Tyrosine-protein kinase JAK1 yes yes 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching 10 0 13 1 1 1 1 1 1 1 1 1 2 1 1 71.175 71.252 2 0.025499 82201 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 38.086 0.89502 91272000 0 0 0 5526100 3094000 4492900 3649700 3666200 3170200 6199900 9554100 12396000 15166000 10248000 14110000 39538 1159 35294 330111;330112;330113;330114;330115;330116;330117;330118;330119;330120;330121;330122;330123 261464 261464 1 PATFRPPNREDTAQAAFYPQK Unmodified 2404.1924 0.19239224 2136 Q07157 TJP1 Tight junction protein ZO-1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 57.257 57.607 4 5.9978E-05 65251 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 50.957 45.158 93203000 0 0 0 0 0 28287000 0 0 0 0 42903000 0 0 0 22013000 39539 2136 35295 330124;330125;330126 261465 261465 1 PATFTVNTK Unmodified 977.5182 0.51819605 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 35.063 34.34 2 8.9054E-32 42162 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 210.05 181.79 2311900000 0 1565600000 33115000 21156000 22150000 64471000 36822000 27574000 37861000 55722000 101590000 88280000 39122000 51909000 166540000 39540 1124 35296 330127;330128;330129;330130;330131;330132;330133;330134;330135;330136;330137;330138;330139;330140;330141;330142 261466;261467;261468;261469;261470;261471;261472;261473;261474;261475;261476;261477;261478;261479;261480;261481;261482;261483;261484 261473 18 PATGRPEDTFYFDPEFTAK Unmodified 2188.0113 0.011299553 1672 P51812 RPS6KA3 Ribosomal protein S6 kinase alpha-3 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 80.234 80.113 3 8.5409E-06 92455 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.893 61.635 52476000 0 0 2905300 0 0 11565000 0 2161800 3619800 4449200 3391800 4516700 2402300 3148400 14316000 39541 1672 35297 330143;330144;330145;330146;330147;330148;330149;330150;330151;330152 261485;261486;261487;261488;261489;261490;261491;261492 261485 7 PATLTTTSATSK Unmodified 1177.619 0.6190323 352 O43670 ZNF207 BUB3-interacting and GLEBS motif-containing protein ZNF207 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.67 3.77 2 3 13 2 2 1 1 1 1 2 1 1 1 1 1 1 1 1 26.252 25.749 2 1.868E-156 21007 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 224.64 200.88 3193000000 107650000 569500000 14524000 130420000 115300000 112880000 139930000 136630000 139770000 173640000 272490000 239500000 208500000 291560000 540710000 39542 352 35298 330153;330154;330155;330156;330157;330158;330159;330160;330161;330162;330163;330164;330165;330166;330167;330168;330169;330170 261493;261494;261495;261496;261497;261498;261499;261500;261501;261502;261503;261504;261505;261506;261507;261508;261509;261510;261511;261512;261513;261514;261515;261516;261517 261503 24 PATPAPSEK Unmodified 896.46035 0.46034682 2201 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 10.395 10.561 2 0.0044372 9455 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 86.833 61.006 84870000 0 0 0 0 4546600 9395300 9251300 3961000 5928000 8537100 8969500 8469400 8261100 10173000 7377300 39543 2201 35299 330171;330172;330173;330174;330175;330176;330177;330178;330179;330180;330181 261518;261519;261520;261521;261522 261521 5 PATPEIQEIVDK Unmodified 1338.7031 0.70309628 742 P01040 CSTA Cystatin-A;Cystatin-A, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 68.385 67.661 2 5.9583E-13 85831 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 152.07 132.31 6706100000 393150 484670000 4303500 1689400000 372810000 355760000 400470000 570950000 204370000 407250000 523930000 660160000 318270000 300940000 412420000 39544 742 35300 330182;330183;330184;330185;330186;330187;330188;330189;330190;330191;330192;330193;330194;330195;330196;330197;330198 261523;261524;261525;261526;261527;261528;261529;261530;261531;261532;261533;261534;261535;261536;261537;261538;261539;261540;261541;261542;261543;261544;261545;261546;261547;261548 261528 25 PATQCISDGK Unmodified 1075.4968 0.49680868 227 O14920 IKBKB Inhibitor of nuclear factor kappa-B kinase subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 12.867 12.659 2 0.0027236 14621 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.46 84.074 21495000 0 8167900 0 0 0 2520500 1452300 0 1945600 0 1569900 2224600 0 1461300 2153100 39545 227 35301 330199;330200;330201;330202;330203;330204;330205;330206 261549;261550;261551 261550 3 PATSGPSSAVVPNTSSR Unmodified 1613.8009 0.80091285 317 O43314 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.377 36.557 2 9.8472E-25 40384 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 105.17 88.145 37859000 0 0 0 2768300 2301100 3034300 3581500 2486900 1884300 3139700 3192400 3990500 2796000 3469400 5214300 39546 317 35302 330207;330208;330209;330210;330211;330212;330213;330214;330215;330216;330217;330218 261552;261553;261554;261555;261556;261557;261558;261559;261560;261561 261553 10 PATSSPGTSAPSASTAAVIQNVTGQNIIK Unmodified 2767.4352 0.43520128 2935 Q6P4R8 NFRKB Nuclear factor related to kappa-B-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 83.534 83.553 3 3.7427E-15 96549 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.605 47.412 20785000 0 0 0 0 2381100 3061000 0 0 0 7334400 0 0 0 0 8008200 39547 2935 35303 330219;330220;330221;330222 261562;261563;261564;261565;261566 261565 5 PAVASVPK Unmodified 767.45414 0.45413923 1420 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 23.822 22.914 2 0.0086853 23544 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 85.359 46.141 492020000 18876000 385460000 7403900 3889800 3393500 3891200 3913500 3364500 2852000 8137800 10913000 10560000 6582400 8238600 14547000 39548 1420 35304 330223;330224;330225;330226;330227;330228;330229;330230;330231;330232;330233;330234;330235;330236;330237;330238 261567;261568;261569;261570;261571;261572;261573;261574;261575 261575 9 PAVAVIDNGR Unmodified 1010.5509 0.55089316 28 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 36.241 36.396 2 0.0033461 40283 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 76.827 51.268 99147000 0 0 0 5958900 5491700 12641000 8273800 5622500 0 14787000 10609000 14146000 0 0 21618000 39549 28 35305 330239;330240;330241;330242;330243;330244;330245;330246;330247 261576;261577;261578;261579 261578 2 PAVAVIDNGRGMTSK Unmodified 1514.7875 0.78751139 28 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 47.358 41.538 3 0.0004144 57489 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.246 57.862 46022000 44147000 0 1874800 0 0 0 0 0 0 0 0 0 0 0 0 39550 28 35306 330248;330249 261580 261580 1 PAVCQPQGR Unmodified 1011.492 0.49199807 2781 Q5T749 KPRP Keratinocyte proline-rich protein yes yes 0 0 0 By MS/MS 10 0 1 1 12.874 12.738 2 0.00508 11861 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 84.244 58.35 5245200 0 0 0 5245200 0 0 0 0 0 0 0 0 0 0 0 39551 2781 35307 330250 261581 261581 1 PAVCYQAITK Unmodified 1149.5852 0.58522975 2680 Q49A26 GLYR1 Putative oxidoreductase GLYR1 yes yes 0 0 0 By MS/MS 2 0 1 1 49.637 43.93 2 0.022208 57220 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.15 68.555 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39552 2680 35308 330251 261582 261582 1 PAVDEMFPEGAGPYVDLDEAGGSTGLLMDLAANEK Oxidation (M) 3594.6382 0.6381957 3585 Q8WXC6 MYEOV2 Myeloma-overexpressed gene 2 protein yes yes 0 1 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 97.582 94.701 3 2.5783E-16 114951 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 54.703 51.274 8037400 0 3445200 4592200 0 0 0 0 0 0 0 0 0 0 0 0 39553 3585 35309 330252;330253 261583;261584 261584 5085 2 PAVDEMFPEGAGPYVDLDEAGGSTGLLMDLAANEK Unmodified 3578.6433 0.64328108 3585 Q8WXC6 MYEOV2 Myeloma-overexpressed gene 2 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 2 1 1 1 1 98.808 94.172 3 3.5436E-27 116115 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 74.846 70.612 18733000 11395000 3337600 3999900 0 0 0 0 0 0 0 0 0 0 0 0 39554 3585 35309 330254;330255;330256 261585;261586;261587;261588 261588 4 PAVDPAAAK Unmodified 838.45487 0.45486751 2875 Q6FI81 CIAPIN1 Anamorsin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.5 3.72 1 3 1 11 2 2 1 1 1 1 1 1 1 1 1 1 1 1 23.436 22.951 2 0.0041866 20103 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 114.5 69.806 799590000 69741000 550950000 3995600 6655400 5756100 29661000 9653000 7669900 10545000 16971000 18638000 0 14284000 19500000 35575000 39555 2875 35310 330257;330258;330259;330260;330261;330262;330263;330264;330265;330266;330267;330268;330269;330270;330271;330272 261589;261590;261591;261592;261593;261594;261595;261596;261597;261598;261599;261600;261601 261595 13 PAVEASTGGEATQETGK Unmodified 1631.7639 0.76385864 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 22.316 22.54 2 5.6882E-37 23182 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 163.99 148.79 45726000 0 0 0 3463100 1774400 0 3695500 2761700 2211600 4463700 5143700 8165100 4385900 3171700 6489200 39556 4285 35311 330273;330274;330275;330276;330277;330278;330279;330280;330281;330282;330283 261602;261603;261604;261605;261606;261607;261608;261609;261610;261611 261609 10 PAVFIPVNR Unmodified 1011.5866 0.58655038 3272 Q8IY37 DHX37 Probable ATP-dependent RNA helicase DHX37 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching 10 0 7 1 1 1 1 1 1 1 65.961 66.023 2 0.035645 75643 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 46.016 30.576 11949000 0 0 0 0 1556800 1347900 1436100 1205100 0 0 2326200 0 1788800 2288500 0 39557 3272 35312 330284;330285;330286;330287;330288;330289;330290 261612 261612 1 PAVLAAPSGLER Unmodified 1179.6612 0.66117189 4346 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 2 1 1 1 1 1 1 59.427 59.533 2 0.0037384 67989 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 72.643 57.492 121160000 0 0 0 7730900 6495700 10595000 11228000 10205000 6680900 0 13511000 13047000 11644000 11675000 18348000 39558 4346 35313 330291;330292;330293;330294;330295;330296;330297;330298;330299;330300;330301;330302 261613;261614 261613 2 PAVLGFEGSANK Unmodified 1188.6139 0.61388734 4549 Q9NPF4 OSGEP Probable tRNA N6-adenosine threonylcarbamoyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 59.283 53.592 2 0.0077811 66278 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 110.47 92.848 245110000 9949000 226840000 8323100 0 0 0 0 0 0 0 0 0 0 0 0 39559 4549 35314 330303;330304;330305;330306 261615;261616;261617 261616 0 PAVLSGYFK Unmodified 980.53312 0.53311783 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching 10 0 8 1 1 1 1 1 1 1 1 67.541 67.541 2 0.011979 77341 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 61.999 41.517 23451000 0 0 0 3322900 1960900 0 3754400 0 2852400 0 0 0 3929200 2621300 5010400 39560 5216 35315 330307;330308;330309;330310;330311;330312;330313;330314 261618;261619;261620 261618 3 PAVNQIECHPYLTQEK Unmodified 1925.9305 0.93054681 1013 P15121 AKR1B1 Aldose reductase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 5.57 3.85 3 1 3 1 2 1 1 1 1 55.506 52.483 3 1.3478E-40 68385 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.22 130.26 1253700000 175780000 691250000 344610000 0 0 0 0 0 0 0 0 8327500 0 10278000 23465000 39561 1013 35316 330315;330316;330317;330318;330319;330320;330321 261621;261622;261623;261624;261625;261626;261627;261628;261629 261621 9 PAVPETAGIK Unmodified 981.5495 0.54949617 4550 Q9NPF5 DMAP1 DNA methyltransferase 1-associated protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38.528 38.061 2 1.0676E-05 48225 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.41 88.853 990150000 0 397120000 4420100 37014000 42804000 48228000 49638000 45179000 41672000 57741000 54439000 55194000 45288000 42419000 68995000 39562 4550 35317 330322;330323;330324;330325;330326;330327;330328;330329;330330;330331;330332;330333;330334;330335 261630;261631;261632;261633;261634;261635;261636;261637;261638;261639;261640;261641 261632 10 PAVPTVASSTDMLHSK Oxidation (M) 1655.8189 0.8188711 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 46.778 46.274 3 3.3527E-24 51932 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 122.12 109.97 262390000 0 44184000 0 0 20845000 24686000 30750000 0 19988000 28427000 0 37663000 33705000 22140000 0 39563 2361 35318 330336;330337;330338;330339;330340;330341;330342;330343;330344;330345;330346 261642;261643;261644;261645;261646;261647;261648;261649;261650;261651;261652;261653;261654;261655;261656;261657;261658;261659 261647 3848 17 PAVPTVASSTDMLHSK Unmodified 1639.824 0.82395647 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 66.579 60.553 3 0.00018912 80659 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.784 59.513 27049000 19624000 0 7425300 0 0 0 0 0 0 0 0 0 0 0 0 39564 2361 35318 330347;330348 261660;261661 261660 2 PAVQAPWSTAEK Unmodified 1283.651 0.65100113 2581 Q15811;CON__ENSEMBL:ENSBTAP00000001528 ITSN1 Intersectin-1 yes no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 7.86 3.4 1 1 5 2 1 1 1 1 1 57.774 55.93 2 0.00026786 71721 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.71 91.013 + 49705000 0 36269000 0 0 0 0 0 0 0 0 0 4235600 2735200 0 6465400 39565 2581 35319 330349;330350;330351;330352;330353;330354;330355 261662;261663;261664;261665;261666;261667 261663 6 PAVSLPPK Unmodified 807.48544 0.48543935 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.12 3.72 4 2 10 2 3 1 1 1 1 1 1 1 1 1 2 40.825 39.381 2 0.00017204 45290 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 154.35 70.736 871490000 155260 111340000 2417100 0 2617300 3668100 43485000 53374000 44858000 135470000 193080000 273970000 0 0 7059000 39566 4226 35320 330356;330357;330358;330359;330360;330361;330362;330363;330364;330365;330366;330367;330368;330369;330370;330371 261668;261669;261670;261671;261672;261673;261674;261675;261676;261677;261678;261679;261680;261681;261682;261683;261684;261685;261686;261687;261688;261689;261690;261691;261692;261693;261694;261695;261696;261697;261698;261699;261700;261701;261702;261703;261704;261705;261706;261707;261708;261709;261710;261711;261712;261713;261714;261715;261716;261717;261718;261719;261720;261721;261722;261723;261724;261725;261726;261727;261728;261729;261730;261731;261732;261733;261734;261735;261736 261732 69 PAVTLTSTPTQGESK Unmodified 1515.7781 0.77805214 4517 Q9HCK8 CHD8 Chromodomain-helicase-DNA-binding protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 41.714 41.469 2 2.2367E-70 46047 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 178.81 166.95 181300000 0 28577000 0 10027000 6375900 15546000 9408900 8721100 12620000 12978000 14772000 13650000 11347000 14917000 22359000 39567 4517 35321 330372;330373;330374;330375;330376;330377;330378;330379;330380;330381;330382;330383;330384 261737;261738;261739;261740;261741;261742;261743;261744;261745;261746;261747;261748;261749 261743 13 PAVTQLLWER Unmodified 1211.6663 0.66625727 2476 Q15021 NCAPD2 Condensin complex subunit 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 80.632 80.77 2 0.0015399 93396 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 104.17 94.461 33303000 0 0 0 0 0 3876500 0 2451000 4046700 3511200 3280900 3615100 1927400 3595700 6998200 39568 2476 35322 330385;330386;330387;330388;330389;330390;330391;330392;330393 261750;261751;261752;261753;261754 261750 5 PAVTTLVVK Unmodified 926.58007 0.58006802 1663 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53.743 52.859 2 2.6401E-05 59888 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 141.52 90.886 1076400000 12792000 35414000 0 47271000 45313000 117320000 55534000 57337000 69422000 90364000 101050000 124790000 97795000 86695000 135340000 39569 1663 35323 330394;330395;330396;330397;330398;330399;330400;330401;330402;330403;330404;330405;330406;330407 261755;261756;261757;261758;261759;261760;261761;261762;261763;261764;261765;261766;261767 261755 8 PAVVAPAPVVEAVSTPSAAFPSDATAEQGPILTK Unmodified 3287.7289 0.72892369 2207 Q12906 ILF3 Interleukin enhancer-binding factor 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.2 3.27 5 2 23 1 4 2 1 2 2 2 2 2 2 2 2 2 2 2 91.809 90.901 3;4 2.91E-166 111880 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 156.37 153.74 1515300000 7180600 1222900000 9678800 1721100 13693000 11710000 6093900 13635000 9136600 56147000 27130000 32216000 7130100 18823000 78106000 39570 2207 35324 330408;330409;330410;330411;330412;330413;330414;330415;330416;330417;330418;330419;330420;330421;330422;330423;330424;330425;330426;330427;330428;330429;330430;330431;330432;330433;330434;330435;330436;330437 261768;261769;261770;261771;261772;261773;261774;261775;261776;261777;261778;261779;261780;261781;261782;261783;261784;261785;261786;261787;261788;261789;261790;261791;261792;261793;261794;261795 261771 24 PAVVETVTTAK Unmodified 1114.6234 0.6233894 1779 P56192 MARS Methionine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.28 3.87 2 3 1 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 46.151 45.494 2 4.5906E-19 48205 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 182.76 115.6 2361600000 102610000 1539800000 50611000 31056000 33527000 77576000 43621000 40392000 43716000 68236000 65730000 74315000 49545000 54255000 86535000 39571 1779 35325 330438;330439;330440;330441;330442;330443;330444;330445;330446;330447;330448;330449;330450;330451;330452;330453;330454;330455 261796;261797;261798;261799;261800;261801;261802;261803;261804;261805;261806;261807;261808;261809;261810;261811;261812;261813;261814;261815 261800 17 PAVVTVGDFPEEDYGLDEI Unmodified 2063.9575 0.95753265 4006 Q99426 TBCB Tubulin-folding cofactor B yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 96.569 90.093 2 2.5577E-06 114257 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 116.77 109.04 197470000 36426000 161040000 0 0 0 0 0 0 0 0 0 0 0 0 0 39572 4006 35326 330456;330457 261816;261817;261818 261818 3 PAYFQRPENALK Unmodified 1432.7463 0.7462985 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 48.808 48.326 3 0.0010121 54050 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 63.091 47.929 634370000 60534000 0 0 22165000 20091000 39550000 30109000 26815000 32310000 54777000 61108000 71676000 79069000 47833000 88336000 39573 2378 35327 330458;330459;330460;330461;330462;330463;330464;330465;330466;330467;330468;330469;330470 261819;261820;261821;261822;261823;261824;261825;261826;261827;261828;261829;261830;261831 261823 9 PAYHSSLMDPDTK Unmodified 1460.6606 0.66057954 258 O15145 ARPC3 Actin-related protein 2/3 complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.85 3.86 7 1 12 3 3 2 1 1 1 1 1 1 1 1 1 1 1 1 39.634 37.599 2;3 1.6634E-21 51870 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 140.91 126.94 2846400000 1423200000 902450000 289050000 19878000 9384400 14546000 9613100 16197000 7110400 13829000 28847000 30016000 15271000 17693000 49360000 39574 258 35328 330471;330472;330473;330474;330475;330476;330477;330478;330479;330480;330481;330482;330483;330484;330485;330486;330487;330488;330489;330490 261832;261833;261834;261835;261836;261837;261838;261839;261840;261841;261842;261843;261844;261845;261846;261847;261848 261838 14 PAYHSSLMDPDTK Oxidation (M) 1476.6555 0.65549416 258 O15145 ARPC3 Actin-related protein 2/3 complex subunit 3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 2 2 2 29.559 25.161 2;3 1.1752E-54 33199 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 201.84 175.17 498300000 261750000 77672000 158880000 0 0 0 0 0 0 0 0 0 0 0 0 39575 258 35328 330491;330492;330493;330494;330495;330496 261849;261850;261851;261852;261853;261854 261849 346 4 PAYNPYTEPSMEVFSYHQGLK Oxidation (M) 2473.126 0.12601173 5090 Q9Y285 FARSA Phenylalanine--tRNA ligase alpha subunit yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 76.083 74.532 3 2.7228E-10 94744 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.282 80.531 121510000 56799000 0 19605000 2015700 0 8980400 0 0 0 11573000 0 0 4602100 0 17935000 39576 5090 35329 330497;330498;330499;330500;330501;330502;330503 261855;261856;261857;261858;261859;261860 261858 6487 6 PAYNPYTEPSMEVFSYHQGLK Unmodified 2457.1311 0.13109711 5090 Q9Y285 FARSA Phenylalanine--tRNA ligase alpha subunit yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 83.286 79.335 3 7.0952E-30 101829 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 92.098 84.401 70586000 62613000 0 0 0 0 0 0 0 0 0 0 0 0 0 7973200 39577 5090 35329 330504;330505 261861;261862;261863 261862 3 PAYQNLR Unmodified 860.45045 0.45045083 3443;3879 Q8NFC6;Q96IK1 BOD1L1;BOD1 Biorientation of chromosomes in cell division protein 1-like 1;Biorientation of chromosomes in cell division protein 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 2 22.771 23.019 2 0.023434 24056 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 85.306 55.968 224920000 0 0 0 10147000 12396000 11025000 9419000 12687000 0 20475000 29683000 30636000 28178000 17027000 43243000 39578 3443;3879 35330 330506;330507;330508;330509;330510;330511;330512;330513;330514;330515;330516;330517 261864;261865;261866;261867;261868;261869 261868 5 PAYSPASWSSR Unmodified 1207.5622 0.56218613 5182 Q9Y446 PKP3 Plakophilin-3 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 47.85 47.962 2 0.0024673 54078 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 67.563 22.402 17442000 0 0 0 0 0 0 6351600 11091000 0 0 0 0 0 0 0 39579 5182 35331 330518;330519 261870;261871 261870 2 PCCFTDLK Unmodified 1039.4467 0.44668736 2465 Q14CX7 NAA25 N-alpha-acetyltransferase 25, NatB auxiliary subunit yes yes 0 0 0 By MS/MS 10 0 1 1 43.439 43.581 2 0.0043249 48667 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 111.82 83.642 8124800 0 0 0 0 0 0 0 0 8124800 0 0 0 0 0 0 39580 2465 35332 330520 261872;261873 261873 2 PCDNGDPYVIALR Unmodified 1488.7031 0.70311306 3592 Q8WXI4 ACOT11 Acyl-coenzyme A thioesterase 11 yes yes 0 0 0 By MS/MS 10 0 1 1 71.495 71.812 2 0.050774 82636 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.785 41.894 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39581 3592 35333 330521 261874 261874 1 PCFPENESSPSSPK Unmodified 1561.6719 0.67187251 3248 Q8IWW6 ARHGAP12 Rho GTPase-activating protein 12 yes yes 0 0 0 By MS/MS 2 0 1 1 40.763 35.711 2 0.010007 46396 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 61.833 46.567 13634000 0 13634000 0 0 0 0 0 0 0 0 0 0 0 0 0 39582 3248 35334 330522 261875 261875 1 PCGDHPLNHR Unmodified 1201.5411 0.54107353 4885 Q9UGP4 LIMD1 LIM domain-containing protein 1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 6.2057 6.4147 3 0.023453 3545 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.961 23.351 4392900 0 0 0 0 0 848630 0 0 0 953510 694580 0 0 617590 1278500 39583 4885 35335 330523;330524;330525;330526;330527 261876 261876 1 PCICQVIQNEQPHAK Unmodified 1820.8662 0.86617242 2411 Q14527 HLTF Helicase-like transcription factor yes yes 0 0 0 By MS/MS 2 0 1 1 64.359 56.08 3 0.015085 75537 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 22.349 6.5834 8023600 8023600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39584 2411 35336 330528 261877 261877 1 PCLQPCEHPEPCPRPEPIPLPAPCPSPEPCR Unmodified 3670.6612 0.66115372 2781 Q5T749 KPRP Keratinocyte proline-rich protein yes yes 0 0 1 By MS/MS 10 0 1 1 76.326 75.831 4 1.8146E-29 88041 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 69.766 64.71 8871500 0 0 0 8871500 0 0 0 0 0 0 0 0 0 0 0 39585 2781 35337 330529 261878 261878 1 PCNSQPSELSSETSGIARPEEGRPVVSGTGNDITTPPNK Unmodified 4064.9345 0.93452915 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 0 2 By MS/MS 2 0 1 1 67.922 64.199 4 9.858E-05 79402 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 29.401 27.929 26013000 0 0 26013000 0 0 0 0 0 0 0 0 0 0 0 0 39586 1226 35338 330530 261879 261879 1 PCPPITSVDK Unmodified 1112.5536 0.55359527 2541 Q15517 CDSN Corneodesmosin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.223 37.403 2 0.0015301 42095 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 105.52 78.918 168500000 0 0 0 36875000 9975400 9926000 8145700 7004800 9905100 8798400 15562000 20908000 17296000 11491000 12613000 39587 2541 35339 330531;330532;330533;330534;330535;330536;330537;330538;330539;330540;330541;330542 261880;261881;261882;261883;261884;261885;261886;261887;261888;261889;261890;261891;261892 261891 13 PCSAPLEPK Unmodified 997.49027 0.49026674 2427 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 25.568 25.176 2 0.001028 31806 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 141.52 113.01 40249000 0 22607000 0 0 0 0 0 0 3339300 2457300 0 3855300 3965400 0 4024200 39588 2427 35340 330543;330544;330545;330546;330547;330548 261893;261894;261895 261893 3 PCSETSQIEDTPSSK Unmodified 1664.7199 0.71994491 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 26.493 26.864 2 0.00037751 27764 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.763 76.746 10749000 0 0 0 0 0 3168300 0 0 0 0 2575400 0 0 1676400 3329200 39589 1226 35341 330549;330550;330551;330552 261896;261897;261898 261897 3 PCSVTVASEASK Unmodified 1234.5864 0.58635197 559 O75928 PIAS2 E3 SUMO-protein ligase PIAS2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 25.268 24.841 2 1.98E-05 31155 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.7 45.132 25668000 0 11047000 0 0 0 2625200 2251100 0 1963900 0 2306200 0 3176700 2298300 0 39590 559 35342 330553;330554;330555;330556;330557;330558;330559 261899;261900;261901;261902;261903 261901 5 PCTEPVVAASARPAGDSVNK Unmodified 2024.9949 0.99493798 1734 P54198 HIRA Protein HIRA yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 39.604 39.888 3 0.00020627 43310 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.036 40.748 33042000 0 0 0 0 2455500 0 4609100 0 0 0 0 7478000 6408600 3853000 8238300 39591 1734 35343 330560;330561;330562;330563;330564;330565;330566 261904;261905;261906;261907;261908;261909 261904 6 PCTVELPR Unmodified 970.4906 0.49060109 340 O43524 FOXO3 Forkhead box protein O3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 43.375 43.514 2 0.010495 49259 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 79.469 51.362 53238000 0 0 0 3863700 3644200 0 4628000 6521000 3655700 5767800 0 8199000 0 5749700 11209000 39592 340 35344 330567;330568;330569;330570;330571;330572;330573;330574;330575 261910;261911;261912 261912 3 PCWYWDK Unmodified 1053.4378 0.43783723 555 O75909 CCNK Cyclin-K yes yes 0 0 0 By MS/MS 2 0 1 1 74.024 65.893 2 0.027727 87175 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.068 81.628 6536700 6536700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39593 555 35345 330576 261913 261913 1 PCYATLFGPK Unmodified 1152.5638 0.56376603 1706 P52943 CRIP2 Cysteine-rich protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 75.995 71.126 2 5.2805E-06 91848 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 141.39 108.5 123480000 71525000 41896000 10063000 0 0 0 0 0 0 0 0 0 0 0 0 39594 1706 35346 330577;330578;330579;330580 261914;261915;261916;261917;261918 261915 5 PCYGILFGPK Unmodified 1150.5845 0.58450147 1706 P52943 CRIP2 Cysteine-rich protein 2 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 81.893 78.377 2 0.0089792 94910 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 77.282 64.926 12015000 0 9584800 2429900 0 0 0 0 0 0 0 0 0 0 0 0 39595 1706 35347 330581;330582;330583 261919;261920;261921 261921 3 PDIDITGPK Unmodified 954.50221 0.50221163 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 20.829 17.061 2 0.021805 24189 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.616 14.635 266690000 13334000 250880000 2481400 0 0 0 0 0 0 0 0 0 0 0 0 39596 2172 35348 330584;330585;330586;330587 261922;261923;261924 261924 2 PDLGTLENVHGLDPNTWK Unmodified 2004.9905 0.99050453 1554 P48739 PITPNB Phosphatidylinositol transfer protein beta isoform yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 85.417 81.791 3 2.2828E-05 101672 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 61.181 51.124 62753000 0 59870000 2882200 0 0 0 0 0 0 0 0 0 0 0 0 39597 1554 35349 330588;330589 261925 261925 1 PDLGTQENVHK Unmodified 1236.6099 0.6098646 2031 Q00169 PITPNA Phosphatidylinositol transfer protein alpha isoform yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 21.339 17.569 3 0.002668 23067 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.132 56.189 98776000 0 98776000 0 0 0 0 0 0 0 0 0 0 0 0 0 39598 2031 35350 330590;330591 261926;261927 261926 2 PDLTAALR Unmodified 855.48142 0.48141661 870 P08670 VIM Vimentin no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 53.275 53.405 2 0.0045796 60166 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 110.14 23.27 555710000 0 0 0 22403000 27168000 81620000 29284000 32565000 48125000 59084000 52188000 74000000 0 54097000 75179000 39599 870 35351 330592;330593;330594;330595;330596;330597;330598;330599;330600;330601;330602;330603 261928;261929;261930;261931;261932;261933;261934;261935;261936;261937;261938;261939;261940 261933 12 PDLTAALRDVR Unmodified 1225.6779 0.67788459 870 P08670 VIM Vimentin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 68.038 68.186 3 0.015117 78246 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 39.785 26.603 89430000 0 0 0 0 2618700 11066000 0 4739200 12427000 8904200 7730700 9226100 6400300 7883200 18435000 39600 870 35352 330604;330605;330606;330607;330608;330609;330610;330611;330612;330613 261941;261942 261942 2 PDMGEIASFDK Oxidation (M) 1224.5333 0.53325376 1953 P63313 TMSB10 Thymosin beta-10 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 48.903 43.634 2 0.0068655 56849 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.65 52.138 36927000 0 36927000 0 0 0 0 0 0 0 0 0 0 0 0 0 39601 1953 35353 330614;330615 261943;261944 261944 3139 2 PDMGEIASFDK Unmodified 1208.5383 0.53833914 1953 P63313 TMSB10 Thymosin beta-10 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 71.572 64.544 2 0.0033748 82151 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.914 62.584 131990000 4875400 127110000 0 0 0 0 0 0 0 0 0 0 0 0 0 39602 1953 35353 330616;330617 261945;261946 261945 2 PDPSGECNPDLR Unmodified 1355.5776 0.57757819 2615;2169 Q09028;Q16576 RBBP4;RBBP7 Histone-binding protein RBBP4;Histone-binding protein RBBP7 no no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 26.758 27.036 2 0.00035817 28724 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 94.297 85.434 36137000 0 0 0 0 1459900 5025400 0 0 2769500 0 6437900 6791400 0 5967500 7685600 39603 2169;2615 35354 330618;330619;330620;330621;330622;330623;330624;330625 261947;261948;261949;261950;261951;261952;261953 261950 7 PDTFLIQEIK Unmodified 1202.6547 0.65468953 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 78.849 78.914 2 0.002012 91228 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 98.044 66.97 40345000 0 0 0 1841400 0 7311900 3062900 2906600 4610600 0 0 0 3512000 6512800 10586000 39604 2775 35355 330626;330627;330628;330629;330630;330631;330632;330633 261954;261955 261954 2 PDTTAPPSSPK Unmodified 1096.5401 0.5400537 1227 P27824 CANX Calnexin yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 15.647 15.707 2 0.0037222 15581 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 63.216 40.476 2790900 0 0 0 0 0 1462800 0 0 1328100 0 0 0 0 0 0 39605 1227 35356 330634;330635 261956;261957;261958 261956 3 PDVVITEK Unmodified 899.4964 0.49639797 1570 P49368 CCT3 T-complex protein 1 subunit gamma yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 32.594 32.842 2 0.013724 36357 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 71.692 58.695 120490000 0 0 0 7169000 0 20928000 5530600 0 12914000 7949400 13471000 15013000 7276600 8252000 21988000 39606 1570 35357 330636;330637;330638;330639;330640;330641;330642;330643;330644;330645 261959;261960;261961 261959 3 PDYDPEK Unmodified 862.37086 0.37086311 5047 Q9UP83 COG5 Conserved oligomeric Golgi complex subunit 5 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 53.233 47.889 2 0.021122 61820 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.63 82.105 80666000 0 80666000 0 0 0 0 0 0 0 0 0 0 0 0 0 39607 5047 35358 330646;330647 261962 261962 1 PDYLGADQR Unmodified 1033.4829 0.48287317 1369 P35998 PSMC2 26S protease regulatory subunit 7 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 30.273 30.328 2 0.02892 32595 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 48.794 29.008 29809000 0 0 0 0 4998200 6562300 0 0 0 8310400 9937900 0 0 0 0 39608 1369 35359 330648;330649;330650;330651 261963;261964;261965 261965 3 PDYLGADQRK Unmodified 1161.5778 0.57783619 1369 P35998 PSMC2 26S protease regulatory subunit 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.35 5 1 19 2 2 2 2 2 2 1 1 1 2 2 2 1 2 1 22.829 21.973 2;3 0.0026314 27222 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 75.387 68.843 1565400000 95749000 213470000 241450000 61490000 92601000 130050000 41088000 20386000 33450000 18138000 199980000 240150000 34716000 44515000 98178000 39609 1369 35360 330652;330653;330654;330655;330656;330657;330658;330659;330660;330661;330662;330663;330664;330665;330666;330667;330668;330669;330670;330671;330672;330673;330674;330675;330676 261966;261967;261968;261969;261970;261971;261972;261973;261974;261975;261976;261977;261978;261979;261980;261981;261982;261983;261984;261985;261986 261973 8 PEAPELVLK Unmodified 994.5699 0.56989727 310 O43252 PAPSS1 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes yes 0 0 0 By MS/MS 2 0 1 1 67.14 61.224 2 0.0065089 78242 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.44 77.316 39593000 0 39593000 0 0 0 0 0 0 0 0 0 0 0 0 0 39610 310 35361 330677 261987 261987 1 PEDPSLLEDPRIK Unmodified 1507.7882 0.7882229 1013 P15121 AKR1B1 Aldose reductase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 65.526 59.847 3 2.1404E-07 73433 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 108.72 86.351 175150000 14463000 151760000 8929600 0 0 0 0 0 0 0 0 0 0 0 0 39611 1013 35362 330678;330679;330680;330681 261988;261989;261990;261991 261989 3 PEELVDYK Unmodified 991.48623 0.48622722 1138 P22392;O60361 NME2;NME2P1 Nucleoside diphosphate kinase B;Putative nucleoside diphosphate kinase yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 39.608 39.86 2 0.0070234 44039 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 91.064 72.686 76126000 0 0 0 0 0 11811000 7646000 7969600 21779000 7882200 9265600 9772500 0 0 0 39612 1138 35363 330682;330683;330684;330685;330686;330687;330688 261992;261993;261994;261995;261996;261997;261998 261996 7 PEEVHHGEEEVETFAFQAEIAQLMSLIINTFYSNK Unmodified 4049.9357 0.93569835 862 P08238 HSP90AB1 Heat shock protein HSP 90-beta yes yes 0 0 0 By MS/MS 2 0 1 1 107.38 102.63 4 1.2134E-22 126699 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.903 66.898 4164000 0 4164000 0 0 0 0 0 0 0 0 0 0 0 0 0 39613 862 35364 330689 261999;262000 262000 2 PEFLEDPSVLTK Unmodified 1373.7078 0.70784731 1446;1447 P42166;P42167 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.28 3.23 3 1 14 1 2 1 1 2 1 2 1 1 1 1 1 1 1 1 78.538 77.528 2 5.5549E-27 89812 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 196.48 171.71 4723400000 47654000 1670000000 31061000 150940000 191640000 264850000 237250000 264890000 207100000 264940000 272150000 321990000 240510000 228290000 330120000 39614 1446;1447 35365 330690;330691;330692;330693;330694;330695;330696;330697;330698;330699;330700;330701;330702;330703;330704;330705;330706;330707 262001;262002;262003;262004;262005;262006;262007;262008;262009;262010;262011;262012;262013;262014;262015;262016;262017;262018;262019;262020;262021 262003 21 PEFVDIINAK Unmodified 1144.6128 0.61282471 1808 P60174 TPI1 Triosephosphate isomerase yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 6.71 3.81 2 1 4 2 1 1 1 1 1 78.218 76.82 2 1.0459E-10 95555 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 169.21 149.43 157820000 0 103440000 13215000 0 0 0 0 0 0 0 7122800 4753300 0 4666700 24620000 39615 1808 35366 330708;330709;330710;330711;330712;330713;330714 262022;262023;262024;262025;262026;262027 262022 6 PEGLPHISDVVLDK Unmodified 1517.809 0.80895834 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.39 3.7 5 1 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 77.123 76.123 3 1.0556E-34 95256 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 157.38 129.41 446540000 22258000 79848000 38985000 5826900 6339700 37029000 10260000 17764000 30066000 28719000 29757000 37410000 21721000 26012000 54542000 39616 2102 35367 330715;330716;330717;330718;330719;330720;330721;330722;330723;330724;330725;330726;330727;330728;330729;330730;330731;330732 262028;262029;262030;262031;262032;262033;262034;262035;262036;262037;262038;262039;262040;262041;262042;262043;262044;262045 262032 18 PEINTNHLDK Unmodified 1179.5884 0.58840088 2356 Q13907 IDI1 Isopentenyl-diphosphate Delta-isomerase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.18 3.74 6 2 14 2 4 2 1 1 1 1 1 2 2 1 2 2 24.322 22.984 2;3 0.00016737 32711 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 125.74 71.579 2412300000 105580000 1706200000 368990000 0 3293100 5090500 2468200 2958900 0 5229900 29973000 53068000 7697800 25933000 95767000 39617 2356 35368 330733;330734;330735;330736;330737;330738;330739;330740;330741;330742;330743;330744;330745;330746;330747;330748;330749;330750;330751;330752;330753;330754 262046;262047;262048;262049;262050;262051;262052;262053;262054;262055;262056;262057;262058;262059 262053 10 PEIVDTCSLASPASVCR Unmodified 1860.871 0.87098302 896 P09960 LTA4H Leukotriene A-4 hydrolase yes yes 0 0 0 By MS/MS 2.5 0.5 2 2 4 73.614 69.062 2;3 8.0476E-204 86702 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 252.42 233.61 349040000 0 349040000 0 0 0 0 0 0 0 0 0 0 0 0 0 39618 896 35369 330755;330756;330757;330758 262060;262061;262062 262060 3 PEIVDTCSLASPASVCRTK Unmodified 2090.0136 0.013624514 896 P09960 LTA4H Leukotriene A-4 hydrolase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 68.207 62.551 3 3.0454E-31 77463 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 123.63 120.14 117070000 18836000 73873000 24360000 0 0 0 0 0 0 0 0 0 0 0 0 39619 896 35370 330759;330760;330761;330762 262063;262064;262065;262066;262067 262067 5 PELASQATEGSK Unmodified 1216.5935 0.59354583 4726 Q9NXG2 THUMPD1 THUMP domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 20.623 18.839 2 7.739E-07 23968 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.22 89.657 16346000 0 13841000 0 0 0 0 0 0 0 0 0 0 0 2504300 0 39620 4726 35371 330763;330764 262068;262069;262070 262069 2 PELAVQK Unmodified 783.44905 0.44905385 1668 P51665 PSMD7 26S proteasome non-ATPase regulatory subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 23.198 22.32 2 0.012128 27747 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 124.89 55.498 1790200000 31810000 878430000 18306000 47017000 53832000 58628000 25759000 23829000 20200000 132500000 154010000 206840000 30748000 40083000 68229000 39621 1668 35372 330765;330766;330767;330768;330769;330770;330771;330772;330773;330774;330775;330776;330777;330778;330779;330780 262071;262072;262073;262074;262075;262076;262077;262078;262079;262080;262081;262082;262083;262084;262085;262086 262083 14 PEMNVVLK Unmodified 928.50519 0.50518852 1771 P55786 NPEPPS Puromycin-sensitive aminopeptidase yes yes 0 0 0 By MS/MS 2 0 1 1 56.209 50.394 2 0.0215 64997 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.568 48.382 26162000 0 26162000 0 0 0 0 0 0 0 0 0 0 0 0 0 39622 1771 35373 330781 262087 262087 1 PENVAPR Unmodified 781.40825 0.40825167 1642 P50991 CCT4 T-complex protein 1 subunit delta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.12 3 13 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 8.9701 8.495 2 0.019046 9943 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.72 42.7 1169800000 41255000 632340000 5955500 41554000 35014000 53476000 44504000 30529000 30907000 28141000 76403000 45074000 29639000 25904000 49124000 39623 1642 35374 330782;330783;330784;330785;330786;330787;330788;330789;330790;330791;330792;330793;330794;330795;330796;330797 262088;262089;262090;262091;262092;262093;262094;262095;262096;262097;262098;262099 262091 10 PENVAPRSGATAGAAGGR Unmodified 1637.8234 0.82337962 1642 P50991 CCT4 T-complex protein 1 subunit delta yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 21.015 17.248 3 0.00010405 24635 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.737 47.583 41247000 36532000 0 4714400 0 0 0 0 0 0 0 0 0 0 0 0 39624 1642 35375 330798;330799 262100;262101 262100 2 PENVAPRSGATAGAAGGRGK Unmodified 1822.9398 0.93980636 1642 P50991 CCT4 T-complex protein 1 subunit delta yes yes 0 0 2 By MS/MS 2 0 2 2 17.278 13.068 3;4 5.1979E-06 19068 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.173 51.01 214320000 214320000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39625 1642 35376 330800;330801 262102;262103 262103 1 PEPAGGGNVSAK Unmodified 1082.5356 0.53563702 3010 Q6ZSJ8 C1orf122 Uncharacterized protein C1orf122 yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 31.489 31.67 2 0.029554 34543 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 37.191 19.951 43615000 0 0 0 0 3287900 0 6933700 5052700 6050200 5092600 4986600 12211000 0 0 0 39626 3010 35377 330802;330803;330804;330805;330806;330807;330808 262104 262104 1 PEPIPLPAPCPSPEPCR Unmodified 1912.9175 0.91753928 2781 Q5T749 KPRP Keratinocyte proline-rich protein yes yes 0 0 0 By MS/MS 10 0 1 1 77.715 77.243 2 0.0032764 89650 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 54.776 48.804 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39627 2781 35378 330809 262105 262105 1 PEPVLEETAPEDAQK Unmodified 1651.7941 0.79409613 2263 Q13283 G3BP1 Ras GTPase-activating protein-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 48.723 48.73 2 7.5202E-27 54853 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 153.74 133 88710000 0 0 0 7757400 5188800 22388000 6801600 0 15823000 11176000 11725000 0 7850200 0 0 39628 2263 35379 330810;330811;330812;330813;330814;330815;330816;330817;330818 262106;262107;262108;262109;262110;262111;262112;262113;262114;262115 262110 10 PERDSEPFSNPLAPDGHDVDDPHSFHQSK Unmodified 3256.4446 0.44459677 2236 Q13123 IK Protein Red yes yes 0 0 1 By MS/MS 2 0 1 1 70.267 61.982 5 0.027264 82631 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 14.593 8.8128 6168400 6168400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39629 2236 35380 330819 262116 262116 1 PETDKEQDSEMEK Unmodified 1564.6563 0.65628202 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 0 1 By MS/MS 2 0 1 1 10.417 7.1524 2 0.0015148 10070 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.734 79.062 3311900 0 3311900 0 0 0 0 0 0 0 0 0 0 0 0 0 39630 1564 35381 330820 262117;262118 262117 2 PETDKEQDSEMEK Oxidation (M) 1580.6512 0.65119665 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 1 1 By MS/MS 3 0 1 1 6.2947 2.9334 3 0.0071765 4380 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 53.754 50.834 4727000 0 4727000 0 0 0 0 0 0 0 0 0 0 0 0 0 39631 1564 35381 330821 262119 262119 2488 1 PETFESLVAK Unmodified 1119.5812 0.58119023 4215 Q9BWU0 SLC4A1AP Kanadaptin yes yes 0 0 0 By MS/MS 2 0 1 1 71.163 65.347 2 0.020352 83131 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.287 39.688 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39632 4215 35382 330822 262120 262120 1 PETQSSPITVQSSK Unmodified 1487.7468 0.74675201 3775 Q96CB8 INTS12 Integrator complex subunit 12 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 31.967 32.283 2 0.00036274 35550 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 90.685 73.249 22943000 0 0 0 0 0 3792100 0 2270200 2475100 2193700 0 3793900 2678200 2442100 3297700 39633 3775 35383 330823;330824;330825;330826;330827;330828;330829;330830 262121;262122;262123;262124;262125 262121 5 PEYAYGSAGSPPK Unmodified 1322.6143 0.61428128 2080 Q02790 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 0 0 0 By MS/MS 10 0 1 1 32.917 33.633 2 0.0059104 35789 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.188 28.826 4800400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4800400 39634 2080 35384 330831 262126 262126 1 PEYGRPNVSAANPR Unmodified 1526.759 0.75898845 1210 P26640 VARS Valine--tRNA ligase yes yes 0 0 1 By MS/MS By matching By matching 10 0 3 1 1 1 30.631 30.731 3 0.035313 33681 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 37.594 23.564 8876900 0 0 0 0 0 5312200 0 1536700 2028000 0 0 0 0 0 0 39635 1210 35385 330832;330833;330834 262127 262127 0 PFAEPGRPPDWFSQK Unmodified 1757.8526 0.85255449 4326 Q9H0E9 BRD8 Bromodomain-containing protein 8 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.133 74.193 3 0.00091479 85342 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 53.3 33.461 99039000 0 0 0 4764100 4125100 11967000 2666300 7503400 7041900 9835900 6715800 6420700 8422800 5335900 24239000 39636 4326 35386 330835;330836;330837;330838;330839;330840;330841;330842;330843;330844;330845;330846 262128;262129;262130;262131 262128 4 PFAIDIFPVTNK Unmodified 1360.7391 0.73908786 3396 Q8NBJ7 SUMF2 Sulfatase-modifying factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 92.084 90.828 2 3.0958E-14 113767 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 133.75 115.08 94565000 53100000 15753000 3740400 0 1087100 1067300 1463500 1156100 1257100 1553900 2898700 3042000 0 1604400 6842200 39637 3396 35387 330847;330848;330849;330850;330851;330852;330853;330854;330855;330856;330857;330858;330859;330860 262132;262133;262134;262135;262136;262137;262138;262139;262140;262141;262142;262143 262133 12 PFAVLVK Unmodified 772.48471 0.48471107 902 P0CG13 CHTF8 Chromosome transmission fidelity protein 8 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.12 3 13 1 1 1 2 2 1 1 1 1 1 1 1 1 1 61.665 60.54 2 0.023328 68892 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 91.093 41.782 309600000 105240000 50226000 16144000 15688000 17863000 11224000 0 11619000 9140600 12875000 13166000 11259000 10155000 9674200 15327000 39638 902 35388 330861;330862;330863;330864;330865;330866;330867;330868;330869;330870;330871;330872;330873;330874;330875;330876 262144;262145;262146;262147;262148;262149;262150;262151;262152;262153;262154;262155 262149 12 PFDHYDFSR Unmodified 1182.5094 0.50942227 2164 Q08AD1 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 46.126 46.452 3 0.018942 51121 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.44 35.863 55325000 0 0 0 0 0 8893800 0 7083400 5644500 7188100 0 7705200 6206400 3627000 8976700 39639 2164 35389 330877;330878;330879;330880;330881;330882;330883;330884 262156 262156 1 PFDLVIPFAVR Unmodified 1272.723 0.72304386 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS 10 0 1 1 96.507 96.661 2 0.00029007 112150 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.551 67.037 3556600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3556600 39640 487 35390 330885 262157 262157 1 PFEADRANVVGEVR Unmodified 1557.79 0.78995423 242 O15027 SEC16A Protein transport protein Sec16A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 49.507 49.749 3 0.0037962 55346 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 44.132 27.95 143680000 0 0 0 8928800 0 0 12587000 0 13584000 12693000 18619000 17327000 18391000 14561000 26993000 39641 242 35391 330886;330887;330888;330889;330890;330891;330892;330893;330894 262158;262159;262160;262161;262162;262163;262164 262162 5 PFEDASFALR Unmodified 1151.5611 0.56112349 2309 Q13526 PIN1 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 2 1 1 1 1 1 1 1 1 1 63.658 63.803 2 0.0062946 81464 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.378 33.188 145810000 0 0 0 0 2820500 18828000 2844500 5096700 3715100 0 13883000 14430000 36839000 10828000 36528000 39642 2309 35392 330895;330896;330897;330898;330899;330900;330901;330902;330903;330904;330905;330906 262165;262166;262167;262168;262169;262170;262171;262172 262168 7 PFEETGVEPVLETASSSAHSTQK Unmodified 2430.1551 0.15506326 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 71.803 71.707 3 2.3005E-10 82173 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 67.866 53.252 8697100 0 0 0 0 1167800 4153700 0 0 3375700 0 0 0 0 0 0 39643 3443 35393 330907;330908;330909 262173;262174 262174 2 PFELSPLVCAK Unmodified 1259.6584 0.6583947 3182 Q86WB0 ZC3HC1 Nuclear-interacting partner of ALK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 7.33 3.77 3 6 1 1 1 1 1 1 1 1 1 81.913 80.255 2 2.5835E-07 101967 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 126.07 103.92 116240000 19896000 70209000 9111700 0 839040 0 0 0 2132000 0 3183100 4147000 3442700 3275600 0 39644 3182 35394 330910;330911;330912;330913;330914;330915;330916;330917;330918 262175;262176;262177;262178;262179 262176 5 PFESSSSIGAEK Unmodified 1237.5826 0.5826468 2502 Q15154 PCM1 Pericentriolar material 1 protein yes yes 0 0 0 By MS/MS 2 0 1 1 35.52 30.672 2 0.0060294 40147 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.827 69.202 21857000 0 21857000 0 0 0 0 0 0 0 0 0 0 0 0 0 39645 2502 35395 330919 262180 262180 1 PFETLLSQNQGGK Unmodified 1417.7201 0.72014333 879 P09211 GSTP1 Glutathione S-transferase P yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 2 1 62.693 62.518 2 1.4867E-25 72241 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 162.36 127.13 28656000 0 0 0 16281000 1212800 2430700 0 4897400 0 0 0 0 3834500 0 0 39646 879 35396 330920;330921;330922;330923;330924;330925 262181;262182;262183;262184;262185 262185 5 PFEVPFLK Unmodified 975.54295 0.54295423 4970 Q9UKK9 NUDT5 ADP-sugar pyrophosphatase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.77 5 2 11 2 3 2 1 1 1 1 1 1 1 1 1 1 1 88.441 86.831 2 0.0028258 109817 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.12 66.759 3452000000 1863100000 996780000 300650000 1036100 1905700 3480200 3248500 3280600 0 3819700 36888000 36397000 2946600 36948000 161500000 39647 4970 35397 330926;330927;330928;330929;330930;330931;330932;330933;330934;330935;330936;330937;330938;330939;330940;330941;330942;330943 262186;262187;262188;262189;262190;262191;262192;262193;262194;262195;262196;262197;262198;262199;262200;262201;262202;262203;262204;262205 262190 19 PFEYETPEMEK Unmodified 1398.6013 0.60133333 2627 Q16666 IFI16 Gamma-interferon-inducible protein 16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 57.983 57.241 2 0.00092563 64496 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.282 67.588 143450000 0 119600000 0 0 0 0 3259000 3314900 2479200 0 5935200 0 0 0 8855100 39648 2627 35398 330944;330945;330946;330947;330948;330949 262206;262207;262208;262209;262210 262208 5 PFEYETPEMEK Oxidation (M) 1414.5962 0.59624795 2627 Q16666 IFI16 Gamma-interferon-inducible protein 16 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 48.833 43.564 2 0.0040003 56192 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.986 75.192 19766000 0 19766000 0 0 0 0 0 0 0 0 0 0 0 0 0 39649 2627 35398 330950;330951 262211 262211 4282 1 PFFHSLSEK Unmodified 1090.5447 0.54474515 923 P10599 TXN Thioredoxin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.4 3.86 5 2 8 3 2 2 1 1 1 1 1 1 1 1 50.133 47.577 2 1.9723E-71 60705 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 241.52 195.39 2623100000 1051800000 295110000 27041000 0 48581000 65533000 64181000 0 49327000 0 147210000 297610000 112250000 0 464460000 39650 923 35399 330952;330953;330954;330955;330956;330957;330958;330959;330960;330961;330962;330963;330964;330965;330966 262212;262213;262214;262215;262216;262217;262218;262219;262220;262221;262222;262223;262224;262225;262226;262227;262228;262229;262230;262231 262227 19 PFGGPPGDELTTR Unmodified 1342.6517 0.65172941 5126 Q9Y2X7 GIT1 ARF GTPase-activating protein GIT1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 54.584 54.898 2 6.2324E-08 61354 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.72 74.784 77106000 0 0 0 0 0 16095000 0 0 8541300 8140200 10615000 8576600 7314300 7686500 10137000 39651 5126 35400 330967;330968;330969;330970;330971;330972;330973;330974 262232;262233;262234;262235;262236;262237;262238;262239;262240 262234 8 PFGHNQSQQDILQENTILK Unmodified 2209.1127 0.11274493 3148;4967 Q86UE8;Q9UKI8 TLK2;TLK1 Serine/threonine-protein kinase tousled-like 2;Serine/threonine-protein kinase tousled-like 1 no no 0 0 0 By MS/MS 2 0 1 1 78.917 70.787 3 0.035667 93081 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 39.905 34.648 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39652 3148;4967 35401 330975 262241 262241 1 PFGQVISTR Unmodified 1003.5451 0.5450795 1252 P29558 RBMS1 RNA-binding motif, single-stranded-interacting protein 1 no no 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 47.079 47.262 2 0.0036117 52238 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 102.51 76.099 90538000 0 0 0 0 4513700 4443200 9601200 7703400 6573000 9505200 11175000 0 11351000 9195800 16476000 39653 1252 35402 330976;330977;330978;330979;330980;330981;330982;330983;330984;330985;330986 262242;262243;262244;262245;262246;262247;262248;262249;262250 262248 8 PFGSEEQLLPVEK Unmodified 1471.7559 0.75586013 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 75.9 74.761 2 4.1933E-215 85851 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 240.85 226.64 3112500000 37191000 2045200000 18616000 44714000 49171000 87950000 59127000 56742000 67858000 96731000 91594000 126670000 94344000 93204000 143380000 39654 528 35403 330987;330988;330989;330990;330991;330992;330993;330994;330995;330996;330997;330998;330999;331000;331001;331002 262251;262252;262253;262254;262255;262256;262257;262258;262259;262260;262261;262262;262263;262264;262265;262266;262267 262255 17 PFGVALLFGGVDEK Unmodified 1447.7711 0.77111627 1228 P28066 PSMA5 Proteasome subunit alpha type-5 yes yes 0 0 0 By MS/MS 10 0 1 1 94.595 94.742 2 6.5932E-05 109977 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.17 73.34 1415400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1415400 39655 1228 35404 331003 262268 262268 1 PFHGDIQCGGHAPGSSK Unmodified 1750.7846 0.78455128 243 O15031 PLXNB2 Plexin-B2 yes yes 0 0 0 By MS/MS 2 0 1 1 29.546 23.926 4 0.0057591 33770 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 37.583 31.868 7951900 7951900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39656 243 35405 331004 262269 262269 1 PFIPLVEK Unmodified 941.5586 0.5586043 4465 Q9H993 ARMT1 Protein-glutamate O-methyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.18 3.29 3 1 13 1 2 1 1 1 1 1 1 1 2 1 1 2 1 76.862 75.823 2 0.0015544 93023 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 154.35 89.547 1230000000 607500000 365520000 186390000 1212600 1092200 0 1362500 1572200 2938400 2469900 10151000 9270400 1845600 8831200 29887000 39657 4465 35406 331005;331006;331007;331008;331009;331010;331011;331012;331013;331014;331015;331016;331017;331018;331019;331020;331021 262270;262271;262272;262273;262274;262275;262276 262274 6 PFLAPETTSPGDRVETPVGER Unmodified 2254.123 0.12297527 3499 Q8TD55 PLEKHO2 Pleckstrin homology domain-containing family O member 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 67.555 67.569 3 1.9549E-05 77328 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 52.784 38.53 121540000 0 0 0 11149000 8137500 14768000 13937000 10850000 9762500 16296000 0 0 0 12905000 23734000 39658 3499 35407 331022;331023;331024;331025;331026;331027;331028;331029;331030 262277;262278;262279;262280;262281;262282;262283;262284;262285;262286;262287 262280 11 PFLDDSTLR Unmodified 1062.5346 0.53457439 323 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.36 60.464 2 0.00269 69079 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 137.9 111.97 567360000 0 0 0 20538000 25170000 66738000 32300000 37369000 51274000 54412000 49554000 65473000 48418000 47769000 68347000 39659 323 35408 331031;331032;331033;331034;331035;331036;331037;331038;331039;331040;331041;331042 262288;262289;262290;262291;262292;262293;262294;262295;262296;262297;262298;262299 262294 11 PFLELDTNLPANR Unmodified 1498.778 0.77799256 1264 P30046;A6NHG4 DDT;DDTL D-dopachrome decarboxylase;D-dopachrome decarboxylase-like protein yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 81.273 81.442 2 2.5421E-25 93792 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 187.42 157.95 73534000 0 0 0 0 0 0 0 0 0 0 13330000 8724100 0 11771000 39708000 39660 1264 35409 331043;331044;331045;331046 262300;262301;262302;262303;262304;262305 262300 6 PFLELDTNLPANRVPAGLEK Unmodified 2193.1794 0.17936793 1264 P30046;A6NHG4 DDT;DDTL D-dopachrome decarboxylase;D-dopachrome decarboxylase-like protein yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 3.23 5 2 2 5 1 1 1 1 85.775 84.005 3 1.203E-71 96660 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 154.6 126.7 123520000 8157500 3307200 3071000 0 0 0 0 0 0 0 13996000 0 0 0 94985000 39661 1264 35410 331047;331048;331049;331050;331051;331052;331053;331054;331055 262306;262307;262308;262309;262310;262311;262312;262313;262314 262308 9 PFLFDTK Unmodified 866.4538 0.45380487 1227 P27824 CANX Calnexin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 69.733 69.049 2 0.0058553 79411 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 151.17 89.176 1375500000 203960000 0 76766000 57172000 64888000 89466000 63248000 74890000 73701000 105750000 94287000 152970000 100600000 90886000 126920000 39662 1227 35411 331056;331057;331058;331059;331060;331061;331062;331063;331064;331065;331066;331067;331068;331069;331070 262315;262316;262317;262318;262319;262320;262321;262322;262323;262324;262325;262326;262327;262328;262329;262330;262331;262332 262323 16 PFLGIGLK Unmodified 843.52182 0.52182486 2457 Q14974 KPNB1 Importin subunit beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.43 3.02 1 2 11 2 1 1 1 1 1 1 1 1 1 1 1 1 79.097 78.051 2 0.0066136 90501 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 99.384 18.284 531340000 141180000 12515000 0 14346000 14864000 62049000 24266000 26985000 27337000 53144000 41652000 36426000 32052000 44521000 0 39663 2457 35412 331071;331072;331073;331074;331075;331076;331077;331078;331079;331080;331081;331082;331083;331084 262333;262334;262335;262336;262337;262338;262339;262340;262341;262342;262343;262344;262345 262342 12 PFLLPVEAVYSVPGR Unmodified 1642.9083 0.90827845 1572 P49411 TUFM Elongation factor Tu, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 4 1 1 2 93.921 94.089 2;3 1.0644E-23 109239 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 124.1 98.886 12323000 0 0 0 0 0 0 0 1043400 0 0 1049900 0 0 0 10230000 39664 1572 35413 331085;331086;331087;331088 262346;262347;262348;262349 262347 4 PFLNGLTGK Unmodified 945.52837 0.5283668 1890 P62306 SNRPF Small nuclear ribonucleoprotein F yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 61.899 61.305 2 0.0038025 69138 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 96.492 57.273 384570000 56457000 0 0 0 19847000 33551000 19228000 30676000 21430000 37325000 32680000 29326000 0 28656000 75398000 39665 1890 35414 331089;331090;331091;331092;331093;331094;331095;331096;331097;331098;331099 262350;262351;262352;262353;262354;262355;262356;262357;262358 262358 8 PFLNGLTGKPVMVK Unmodified 1499.8534 0.85340611 1890 P62306 SNRPF Small nuclear ribonucleoprotein F yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 74.78 74.211 3 0.00080114 97264 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.954 74.604 143110000 27089000 0 0 2531500 1719900 8261600 2308100 14021000 4891800 6326800 4878600 10499000 4523600 6640900 49419000 39666 1890 35415 331100;331101;331102;331103;331104;331105;331106;331107;331108;331109;331110;331111;331112 262359;262360;262361;262362;262363 262362 5 PFLNGLTGKPVMVK Oxidation (M) 1515.8483 0.84832073 1890 P62306 SNRPF Small nuclear ribonucleoprotein F yes yes 0 1 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 69.19 68.201 3 0.00041025 77875 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 60.364 48.493 180980000 26846000 0 0 0 0 0 0 27432000 14303000 27218000 0 43770000 23210000 18201000 0 39667 1890 35415 331113;331114;331115;331116;331117;331118;331119 262364;262365;262366;262367;262368 262364 3063 4 PFLNRAESQSQEK Unmodified 1532.7583 0.75831975 2795 Q5TCZ1 SH3PXD2A SH3 and PX domain-containing protein 2A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 24.916 25.189 3 0.0031942 26422 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 44.426 30.198 62627000 0 0 0 4023900 0 0 6130700 7033200 8217900 9251800 6109900 9846100 5074900 0 6938800 39668 2795 35416 331120;331121;331122;331123;331124;331125;331126;331127;331128 262369;262370;262371;262372;262373;262374;262375 262373 7 PFLPSSQSR Unmodified 1017.5243 0.52434406 5186 Q9Y485 DMXL1 DmX-like protein 1 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 38.557 38.679 2 0.025695 43854 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 50.127 23.164 7081500 0 0 0 2006300 0 0 0 0 0 0 0 0 0 0 5075200 39669 5186 35417 331129;331130 262376 262376 1 PFLRPELGPR Unmodified 1180.6717 0.671677 623 O95155 UBE4B Ubiquitin conjugation factor E4 B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 56.922 57.247 3 0.010469 65165 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 41.399 27.193 59416000 0 0 0 0 0 15547000 0 0 4965800 6694700 9354100 7454200 0 0 15400000 39670 623 35418 331131;331132;331133;331134;331135;331136 262377 262377 1 PFLSNSLGGQDDTR Unmodified 1505.711 0.71103521 10 A1X283 SH3PXD2B SH3 and PX domain-containing protein 2B yes yes 0 0 0 By MS/MS 10 0 1 1 57.033 57.085 2 0.0093081 64977 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 55.401 36.621 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39671 10 35419 331137 262378 262378 1 PFLSNSLGGQDDTRGK Unmodified 1690.8275 0.82746195 10 A1X283 SH3PXD2B SH3 and PX domain-containing protein 2B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 48.298 47.824 3 3.6599E-05 52518 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.178 75.606 202920000 55864000 0 0 6395800 0 15619000 10393000 8453000 13387000 14438000 13276000 18929000 10790000 11257000 24113000 39672 10 35420 331138;331139;331140;331141;331142;331143;331144;331145;331146;331147;331148;331149 262379;262380;262381;262382;262383;262384;262385;262386;262387 262381 7 PFLSSAPEVR Unmodified 1101.5819 0.58185893 5002 Q9ULR3 PPM1H Protein phosphatase 1H yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 57.278 57.399 2 0.0009285 65241 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 112.84 78.034 176040000 0 0 0 9499900 12195000 12094000 13303000 13325000 12667000 16616000 20470000 20915000 15255000 9075200 20623000 39673 5002 35421 331150;331151;331152;331153;331154;331155;331156;331157;331158;331159;331160;331161 262388;262389;262390;262391;262392;262393;262394;262395;262396;262397;262398;262399;262400;262401;262402 262390 15 PFLYYPEIK Unmodified 1168.6168 0.61684746 1096 P19838 NFKB1 Nuclear factor NF-kappa-B p105 subunit;Nuclear factor NF-kappa-B p50 subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 81.74 80.622 2 0.0015975 102389 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 118.74 102.54 202710000 90877000 26527000 19490000 1565500 1968200 7196800 3228700 2825000 3952000 8431800 5244700 6858000 3058700 4268300 17219000 39674 1096 35422 331162;331163;331164;331165;331166;331167;331168;331169;331170;331171;331172;331173;331174;331175;331176;331177 262403;262404;262405;262406;262407;262408;262409;262410;262411;262412;262413 262407 11 PFMLDEEGDTQTEETQPSETK Oxidation (M) 2427.0271 0.027145131 1099 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 0 1 0 By MS/MS 2.33 0.471 2 1 3 58.511 53.007 2;3 4.9204E-38 67936 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.61 113.82 65905000 0 65905000 0 0 0 0 0 0 0 0 0 0 0 0 0 39675 1099 35423 331178;331179;331180 262414;262415;262416 262416 1574 3 PFMLDEEGDTQTEETQPSETK Unmodified 2411.0322 0.032230509 1099 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 67.461 62.158 2 4.7619E-112 79352 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 238.43 231.7 30596000 0 30596000 0 0 0 0 0 0 0 0 0 0 0 0 0 39676 1099 35423 331181;331182 262417 262417 1 PFMTGAAEQIK Unmodified 1191.5958 0.59579444 984 P13693;Q56UQ5 TPT1 Translationally-controlled tumor protein;TPT1-like protein yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.12 3.72 2 1 5 2 1 1 1 1 1 1 55.77 53.57 2 2.827E-16 66882 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 179.81 123.79 2631200000 0 1900700000 494390000 0 0 0 0 0 0 0 59944000 0 0 36834000 139260000 39677 984 35424 331183;331184;331185;331186;331187;331188;331189;331190 262418;262419;262420;262421;262422;262423;262424;262425;262426;262427;262428 262424 11 PFMTGAAEQIK Oxidation (M) 1207.5907 0.59070906 984 P13693;Q56UQ5 TPT1 Translationally-controlled tumor protein;TPT1-like protein yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.85 3.79 12 1 7 1 4 8 1 1 1 1 1 1 1 42.093 39.703 2 7.9561E-21 42661 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 166.34 115.28 3727400000 453640000 2464100000 627530000 11473000 0 0 8154000 0 6196200 8473400 42097000 29740000 0 0 75978000 39678 984 35424 331191;331192;331193;331194;331195;331196;331197;331198;331199;331200;331201;331202;331203;331204;331205;331206;331207;331208;331209;331210 262429;262430;262431;262432;262433;262434;262435;262436;262437;262438;262439;262440;262441;262442;262443;262444;262445;262446;262447;262448;262449 262434 1329 21 PFNLSQGK Unmodified 889.46577 0.46576654 5009 Q9ULW0 TPX2 Targeting protein for Xklp2 yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 38.764 32.969 2 0.025513 43220 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.098 62.25 74314000 54307000 20006000 0 0 0 0 0 0 0 0 0 0 0 0 0 39679 5009 35425 331211;331212 262450 262450 1 PFNRSSPDVK Unmodified 1145.5829 0.58292157 662 O95453 PARN Poly(A)-specific ribonuclease PARN yes yes 0 0 1 By MS/MS 2 0 1 1 23.152 18.256 3 0.029987 25984 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.496 19.033 231660000 231660000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39680 662 35426 331213 262451 262451 1 PFNSPANLAR Unmodified 1085.5618 0.56179219 3001 Q6ZN55 ZNF574 Zinc finger protein 574 yes yes 0 0 0 By MS/MS 10 0 1 1 45.414 46.154 2 0.012523 50868 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.423 42.821 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39681 3001 35427 331214 262452 262452 1 PFPAVSPEPR Unmodified 1095.5713 0.57129425 3897 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 52.373 52.596 2 0.0056762 60683 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 67.993 50.597 82431000 0 0 0 4182200 0 11900000 0 0 5304900 11067000 8207700 9071500 8969000 9177700 14551000 39682 3897 35428 331215;331216;331217;331218;331219;331220;331221;331222;331223;331224 262453;262454;262455;262456;262457 262457 5 PFPINHGETSDETLLEDAIEVCK Unmodified 2613.2268 0.22684799 1020 P15374 UCHL3 Ubiquitin carboxyl-terminal hydrolase isozyme L3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 91.289 86.61 3 5.3367E-56 109047 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.64 88.851 74396000 40924000 30873000 2598900 0 0 0 0 0 0 0 0 0 0 0 0 39683 1020 35429 331225;331226;331227;331228 262458;262459;262460;262461;262462 262458 5 PFPINHGETSDETLLEDAIEVCKK Unmodified 2741.3218 0.32181101 1020 P15374 UCHL3 Ubiquitin carboxyl-terminal hydrolase isozyme L3 yes yes 0 0 1 By MS/MS 2 0 1 1 90.05 81.92 4 3.1599E-05 106425 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.582 47.136 12110000 12110000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39684 1020 35430 331229 262463;262464 262464 2 PFPTSGRAEASPNDTAGAR Unmodified 1900.9028 0.90275216 3968 Q96RK0 CIC Protein capicua homolog yes yes 0 0 1 By MS/MS By matching 10 0 2 1 1 32.322 32.752 3 0.0033004 35726 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 29.687 6.679 5701000 0 0 0 0 0 0 0 0 2453400 0 0 3247600 0 0 0 39685 3968 35431 331230;331231 262465;262466 262466 2 PFPVTTQGSQQTQPPQK Unmodified 1867.9428 0.94282606 1644 P51003 PAPOLA Poly(A) polymerase alpha yes yes 0 0 0 By MS/MS 2.5 0.5 2 2 4 48.576 43.314 2;3 5.8588E-09 56050 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.87 112.36 135610000 0 135610000 0 0 0 0 0 0 0 0 0 0 0 0 0 39686 1644 35432 331232;331233;331234;331235 262467;262468;262469 262467 1 PFQCTFEGCGK Unmodified 1329.5482 0.54819232 1190;281 P25490;O15391 YY1;YY2 Transcriptional repressor protein YY1;Transcription factor YY2 no no 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 49.531 42.757 2 3.7624E-19 55724 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 183.47 180.06 104100000 6390000 97707000 0 0 0 0 0 0 0 0 0 0 0 0 0 39687 1190;281 35433 331236;331237 262470 262470 1 PFQSGSTPLHLTHR Unmodified 1576.811 0.81102402 535 O75717 WDHD1 WD repeat and HMG-box DNA-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 2 1 2 1 2 43.302 43.656 3;4 0.003935 47698 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.69 31.632 73282000 0 0 0 0 0 14877000 0 7553800 0 12354000 0 10635000 0 0 27863000 39688 535 35434 331238;331239;331240;331241;331242;331243;331244;331245 262471;262472 262472 2 PFSAPKPQTSPSPK Unmodified 1467.7722 0.7721789 2055 Q01518 CAP1 Adenylyl cyclase-associated protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33.968 33.408 3 6.8107E-05 42331 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 98.943 89.285 555250000 298050000 0 17812000 32905000 7150700 7846400 17709000 9629900 5059000 27954000 31886000 27398000 14349000 16745000 40756000 39689 2055 35435 331246;331247;331248;331249;331250;331251;331252;331253;331254;331255;331256;331257;331258;331259 262473;262474;262475;262476;262477;262478;262479;262480;262481;262482 262478 8 PFSIQELELR Unmodified 1230.6608 0.66083754 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 83.684 83.82 2 0.00023696 96723 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 140.83 111.17 79713000 0 0 0 0 0 0 0 0 0 14613000 9458000 15139000 7527100 11046000 21929000 39690 5262 35436 331260;331261;331262;331263;331264;331265;331266 262483;262484;262485;262486;262487;262488;262489;262490 262486 8 PFSLQETYEAK Unmodified 1311.6347 0.63468237 2373;4663 Q14141;Q9NVA2 SEPT6;SEPT11 Septin-6;Septin-11 no no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 61.222 60.725 2 2.2607E-05 68664 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 142.43 110.11 159590000 0 119300000 0 0 2262000 3499500 3195700 2972900 0 0 10648000 6718700 2858700 0 8139700 39691 2373;4663 35437 331267;331268;331269;331270;331271;331272;331273;331274;331275 262491;262492;262493;262494;262495;262496;262497;262498 262493 8 PFSNSHNALK Unmodified 1113.5567 0.55670682 967 P12277 CKB Creatine kinase B-type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6 4 4 4 2 2 1 1 1 1 18.512 16.543 2 9.727E-11 25419 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 166.19 116.83 1108200000 698740000 353160000 0 0 0 0 0 0 0 0 12322000 8758700 0 9533700 25671000 39692 967 35438 331276;331277;331278;331279;331280;331281;331282;331283 262499;262500;262501;262502;262503;262504;262505;262506;262507 262503 8 PFSPQLSAPITTK Unmodified 1385.7555 0.7554662 5005 Q9ULU4 ZMYND8 Protein kinase C-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71.464 70.592 2 5.184E-09 81334 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 111.52 83.126 350180000 41436000 82696000 0 10696000 13941000 15588000 14026000 15668000 12205000 22573000 25070000 27392000 19680000 19570000 29636000 39693 5005 35439 331284;331285;331286;331287;331288;331289;331290;331291;331292;331293;331294;331295;331296;331297 262508;262509;262510;262511;262512;262513;262514;262515;262516;262517;262518;262519 262514 11 PFSQPLNPVPGSSSFSK Unmodified 1774.889 0.88899957 3227 Q8IVH2 FOXP4 Forkhead box protein P4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73.389 72.822 2 6.1495E-25 83254 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 107.53 94.549 124660000 16252000 0 0 6133300 5546900 12677000 6284300 9338900 6173700 10081000 9872100 11698000 10198000 9610800 10794000 39694 3227 35440 331298;331299;331300;331301;331302;331303;331304;331305;331306;331307;331308;331309;331310;331311 262520;262521;262522;262523;262524;262525;262526;262527;262528;262529;262530;262531;262532;262533 262529 14 PFSVPHTK Unmodified 911.4865 0.48650199 512 O75528 TADA3 Transcriptional adapter 3 yes yes 0 0 0 By MS/MS 2 0 1 1 37.392 30.894 2 0.028816 43010 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.282 21.841 7999500 7999500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39695 512 35441 331312 262534 262534 1 PFTCLDGSATIPFDQVNDDYCDCK Unmodified 2837.1619 0.16188125 996 P14314 PRKCSH Glucosidase 2 subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 1 4 1 88.354 83.626 2;3 1.7259E-102 104575 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 208.39 206.15 626740000 9453800 611150000 6133800 0 0 0 0 0 0 0 0 0 0 0 0 39696 996 35442 331313;331314;331315;331316;331317;331318 262535;262536;262537;262538;262539;262540;262541;262542 262537 8 PFTIDVDK Unmodified 933.48075 0.48074791 631 O95235 KIF20A Kinesin-like protein KIF20A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 56.031 56.194 2 0.012862 63178 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.665 43.245 67518000 0 0 0 0 5611000 0 9467800 5544900 6183100 0 17045000 13413000 10253000 0 0 39697 631 35443 331319;331320;331321;331322;331323;331324;331325 262543 262543 1 PFTQLVK Unmodified 831.48544 0.48543935 5247 Q9Y5S2 CDC42BPB Serine/threonine-protein kinase MRCK beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 4 1 2 1 54.613 48.686 2 0.021078 60685 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 155.51 76.394 324320000 160440000 121540000 42347000 0 0 0 0 0 0 0 0 0 0 0 0 39698 5247 35444 331326;331327;331328;331329 262544;262545 262545 0 PFVCAANGCDQK Unmodified 1365.5806 0.58055508 3648 Q92664 GTF3A Transcription factor IIIA yes yes 0 0 0 By MS/MS 2 0 1 1 32.937 28.403 2 6.1341E-07 37000 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.52 103.73 14246000 0 14246000 0 0 0 0 0 0 0 0 0 0 0 0 0 39699 3648 35445 331330 262546 262546 1 PFVCGVCGAGFSR Unmodified 1412.6329 0.632925 27 A6NFI3 ZNF316 Zinc finger protein 316 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 39.064 39.142 2 0.027905 43565 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 35.511 6.038 56997000 0 0 0 7393500 4310700 10956000 4989000 0 8166500 7284700 5682100 8214400 0 0 0 39700 27 35446 331331;331332;331333;331334;331335;331336;331337;331338 262547;262548 262547 2 PFVEEVIDNK Unmodified 1188.6027 0.60265396 3696 Q92990 GLMN Glomulin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.42 3.66 3 1 8 1 2 1 1 1 1 1 1 1 1 1 66.213 64.406 2 7.9491E-06 82324 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 152.11 112.47 355710000 24102000 220180000 45235000 3175700 0 15379000 0 4294500 0 10267000 10165000 8978200 5304400 8632700 0 39701 3696 35447 331339;331340;331341;331342;331343;331344;331345;331346;331347;331348;331349;331350 262549;262550;262551;262552;262553;262554;262555;262556;262557;262558;262559;262560;262561;262562 262551 14 PFVFEGK Unmodified 822.42759 0.42759012 5063 Q9UPW5 AGTPBP1 Cytosolic carboxypeptidase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 57.886 51.908 2 0.025533 70281 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 100.07 68.487 41413000 22703000 10698000 8012400 0 0 0 0 0 0 0 0 0 0 0 0 39702 5063 35448 331351;331352;331353 262563;262564 262563 2 PFYVVAESFK Unmodified 1185.607 0.60701105 2395 Q14232 EIF2B1 Translation initiation factor eIF-2B subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.86 3.4 2 2 10 2 1 1 1 1 1 1 1 1 1 1 1 1 79.45 78.032 2 4.9454E-05 99490 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 124.23 110.02 343850000 125800000 13410000 87767000 5781800 0 23706000 8551100 0 10077000 14257000 12030000 14109000 0 0 28362000 39703 2395 35449 331354;331355;331356;331357;331358;331359;331360;331361;331362;331363;331364;331365;331366;331367 262565;262566;262567;262568;262569;262570;262571;262572;262573;262574;262575;262576;262577;262578 262571 13 PGAAPPSTEERK Unmodified 1238.6255 0.62551466 3709 Q93074 MED12 Mediator of RNA polymerase II transcription subunit 12 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 2 1 1 1 9.2227 9.4633 3 0.0018984 7257 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.991 33.939 13186000 0 0 0 0 0 0 0 0 2840200 0 0 0 4380100 2598600 3367100 39704 3709 35450 331368;331369;331370;331371;331372;331373 262579;262580;262581;262582;262583 262582 5 PGAAPTEHK Unmodified 906.45593 0.45593014 3308 Q8N163 CCAR2 Cell cycle and apoptosis regulator protein 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 2.7607 0.063844 2 0.0096112 1517 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 86.833 64.211 11244000 0 1773600 9470100 0 0 0 0 0 0 0 0 0 0 0 0 39705 3308 35451 331374;331375 262584 262584 1 PGAEEQTQVAK Unmodified 1156.5724 0.57241646 3907 Q96KG9 SCYL1 N-terminal kinase-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 11.639 11.824 2 0.00029757 10871 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 90.108 75.901 14335000 0 0 0 0 0 3565100 0 0 2315400 1924000 0 0 1813200 2124900 2592000 39706 3907 35452 331376;331377;331378;331379;331380;331381 262585;262586;262587;262588 262585 4 PGAFSTVLQPSNQVLR Unmodified 1712.921 0.9209684 406 O60504 SORBS3 Vinexin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 56.984 57.002 3 0.039358 65573 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 25.609 15.27 274250000 0 0 0 52720000 18331000 40973000 0 50841000 20782000 28693000 0 29471000 32442000 0 0 39707 406 35453 331382;331383;331384;331385;331386;331387;331388;331389 262589;262590 262589 2 PGAGLLLVETLLDEEK Unmodified 1695.9295 0.9294674 678 O95671 ASMTL N-acetylserotonin O-methyltransferase-like protein yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 102.05 95.627 2 2.0172E-38 120503 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.7 118.89 14247000 6009800 8237700 0 0 0 0 0 0 0 0 0 0 0 0 0 39708 678 35454 331390;331391 262591;262592;262593 262591 3 PGAGPAQVPR Unmodified 948.51411 0.51411372 690 O95785 WIZ Protein Wiz yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.446 24.649 2 0.0012139 26488 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 108.7 91.403 103120000 0 0 0 8925400 4717800 9695800 6116000 6077600 6162200 7952300 10443000 9730700 13197000 7915200 12190000 39709 690 35455 331392;331393;331394;331395;331396;331397;331398;331399;331400;331401;331402;331403 262594;262595;262596;262597;262598;262599;262600;262601;262602;262603;262604;262605 262594 12 PGAGVPDFLPSAQR Unmodified 1410.7256 0.72556306 5059 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.95 76.012 2 1.2198E-07 87731 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 117.52 102.38 102620000 0 0 0 6318400 5597300 5292400 9114000 6176700 4541800 8678600 9978400 12890000 7911600 8463300 17662000 39710 5059 35456 331404;331405;331406;331407;331408;331409;331410;331411;331412;331413;331414;331415 262606;262607;262608;262609;262610;262611;262612;262613;262614;262615;262616 262614 11 PGAHLTVK Unmodified 821.47594 0.4759373 891;1679 P09651;Q32P51;P51991 HNRNPA1;HNRNPA1L2;HNRNPA3 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2;Heterogeneous nuclear ribonucleoprotein A3 no no 0 0 0 By MS/MS By matching By MS/MS 2 0 3 1 1 1 18.294 14.805 2 0.0032548 21622 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 150.17 83.13 251480000 165110000 20080000 66294000 0 0 0 0 0 0 0 0 0 0 0 0 39711 891;1679 35457 331416;331417;331418 262617;262618;262619;262620;262621 262618 5 PGAHVTVK Unmodified 807.46029 0.46028724 1141 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 11.508 7.9319 2 0.0027475 12113 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 151.29 92.311 869840000 658840000 211010000 0 0 0 0 0 0 0 0 0 0 0 0 0 39712 1141 35458 331419;331420 262622;262623 262623 1 PGAIDNQPLVTQEPVK Unmodified 1704.9046 0.90464964 3442 Q8NFA0 USP32 Ubiquitin carboxyl-terminal hydrolase 32 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 60.199 59.739 2 2.1184E-19 67566 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.85 93.941 49413000 0 20702000 0 0 2174900 2808400 3202800 2745100 2807100 0 4424800 0 4028200 2957200 3562500 39713 3442 35459 331421;331422;331423;331424;331425;331426;331427;331428;331429;331430;331431;331432 262624;262625;262626;262627;262628;262629;262630;262631;262632 262627 8 PGAIVIDCGINYVPDDK Unmodified 1844.8978 0.8978497 953 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79.821 78.671 2 2.8744E-183 91116 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 222.1 206.71 831190000 72551000 463220000 38068000 5121100 10913000 25409000 13927000 19654000 25938000 25696000 25702000 26967000 14956000 21083000 41989000 39714 953 35460 331433;331434;331435;331436;331437;331438;331439;331440;331441;331442;331443;331444;331445;331446;331447;331448;331449 262633;262634;262635;262636;262637;262638;262639;262640;262641;262642;262643;262644;262645;262646;262647;262648;262649;262650;262651 262639 17 PGALAEGAAEPEPQR Unmodified 1491.7318 0.73177065 4739 Q9NYB0 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.524 36.705 2 1.2992E-20 39389 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 142.07 125.04 88857000 0 0 0 3360200 3320600 6182700 4367800 3860700 5435400 6908100 8951000 15071000 9063400 7230900 15105000 39715 4739 35461 331450;331451;331452;331453;331454;331455;331456;331457;331458;331459;331460;331461 262652;262653;262654;262655;262656;262657;262658;262659;262660;262661;262662;262663 262655 12 PGALAEGAAEPEPQRHAGR Unmodified 1912.9504 0.95037105 4739 Q9NYB0 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 yes yes 0 0 1 By MS/MS 2 0 2 2 33.861 27.629 3;4 2.2099E-05 38811 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.188 39.53 29795000 29795000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39716 4739 35462 331462;331463 262664;262665 262664 2 PGALWHIYAAK Unmodified 1225.6608 0.66077796 3061;5193 Q9Y4C1;Q7LBC6 KDM3A;KDM3B Lysine-specific demethylase 3A;Lysine-specific demethylase 3B no no 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 66.226 66.471 3 0.0013347 75099 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.276 50.651 46935000 0 0 0 0 0 9306000 0 3207900 4164700 2948700 2695000 8700400 0 0 15912000 39717 5193;3061 35463 331464;331465;331466;331467;331468;331469;331470 262666;262667 262667 2 PGAPPQPAVSAR Unmodified 1146.6146 0.61455605 3010 Q6ZSJ8 C1orf122 Uncharacterized protein C1orf122 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 29.077 29.315 2 0.0073779 31132 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 61.65 35.266 96042000 0 0 0 0 6800700 8979600 7690200 10162000 0 10810000 11609000 13017000 0 8613300 18361000 39718 3010 35464 331471;331472;331473;331474;331475;331476;331477;331478;331479;331480;331481 262668;262669;262670;262671;262672;262673;262674;262675;262676;262677 262674 9 PGARINQDHK Unmodified 1134.5894 0.58940393 3258 Q8IXH7 NELFCD Negative elongation factor C/D yes yes 0 0 1 By MS/MS 2 0 1 1 6.5125 3.0803 2 0.01608 6106 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 102.46 67.107 19575000 19575000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39719 3258 35465 331482 262678 262678 1 PGASENILGWHGSK Unmodified 1451.7157 0.71572665 4223 Q9BXB5 OSBPL10 Oxysterol-binding protein-related protein 10 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 54.27 54.514 3 0.015911 60557 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.787 22.468 19447000 0 0 0 0 0 3356300 1879000 2053200 2833700 2932600 2901000 0 0 0 3491200 39720 4223 35466 331483;331484;331485;331486;331487;331488;331489 262679;262680 262679 2 PGAVGAGEFVSPCESGDNTGEPSALEEQRGPLPLNK Unmodified 3665.7268 0.72676821 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 81.258 78.73 4 6.3492E-09 95574 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 37.461 35.819 6877300 0 0 6877300 0 0 0 0 0 0 0 0 0 0 0 0 39721 2203 35467 331490 262681 262681 0 PGAVSTPVK Unmodified 854.48617 0.48616764 2136 Q07157 TJP1 Tight junction protein ZO-1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 24.333 20.245 2 0.036336 26638 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.969 26.268 39746000 0 39746000 0 0 0 0 0 0 0 0 0 0 0 0 0 39722 2136 35468 331491;331492 262682 262682 1 PGCTDLGTGPK Unmodified 1101.5125 0.51245874 4885 Q9UGP4 LIMD1 LIM domain-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 24.733 20.604 2 0.0047468 26999 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.939 50.427 22849000 0 22849000 0 0 0 0 0 0 0 0 0 0 0 0 0 39723 4885 35469 331493 262683 262683 1 PGDDIVLMAEALEK Unmodified 1499.7541 0.75414558 441 O60885 BRD4 Bromodomain-containing protein 4 yes yes 0 0 0 By MS/MS 2 0 1 1 96.458 91.636 2 2.0342E-52 113585 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 190.46 157.2 10717000 0 10717000 0 0 0 0 0 0 0 0 0 0 0 0 0 39724 441 35470 331494 262684 262684 1 PGDGEFVEVISLPK Unmodified 1485.7715 0.7715102 4970 Q9UKK9 NUDT5 ADP-sugar pyrophosphatase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.06 3.7 4 3 11 2 4 1 1 1 1 1 1 1 1 1 1 1 1 86.624 84.754 2;3 1.7815E-66 101509 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 237.68 227.99 1648600000 140520000 1264300000 79387000 3743400 3380400 0 0 4718300 0 4291600 26593000 25757000 2431400 20173000 73383000 39725 4970 35471 331495;331496;331497;331498;331499;331500;331501;331502;331503;331504;331505;331506;331507;331508;331509;331510;331511;331512 262685;262686;262687;262688;262689;262690;262691;262692;262693;262694;262695;262696;262697;262698;262699;262700;262701;262702;262703;262704;262705 262693 18 PGDLGVDLTSK Unmodified 1100.5714 0.57135383 1394 P38117 ETFB Electron transfer flavoprotein subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.64 2.9 1 1 9 2 1 1 1 1 1 1 1 1 1 53.921 53.006 2 7.8505E-29 66797 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 198.72 132.42 241510000 0 190310000 0 3153300 3068400 0 3761500 2444000 0 27972000 0 0 0 10800000 0 39726 1394 35472 331513;331514;331515;331516;331517;331518;331519;331520;331521;331522;331523 262706;262707;262708;262709;262710;262711;262712;262713;262714;262715;262716 262710 11 PGDLIFAK Unmodified 859.48035 0.48035398 505 O75475 PSIP1 PC4 and SFRS1-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 9.36 2.01 1 10 1 1 1 1 1 1 1 1 1 1 1 57.336 57.145 2 0.031953 64975 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 54.611 21.173 253280000 0 12158000 0 0 0 33024000 18467000 12913000 25532000 21449000 29279000 24746000 18610000 18266000 38838000 39727 505 35473 331524;331525;331526;331527;331528;331529;331530;331531;331532;331533;331534 262717;262718;262719;262720 262717 4 PGDLVFAK Unmodified 845.4647 0.46470391 3102 Q7Z4V5 HDGFRP2 Hepatoma-derived growth factor-related protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.46 1.87 1 12 1 2 1 1 1 1 1 1 1 1 1 1 49.364 49.03 2 0.0068825 54303 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 92.47 59.113 149860000 0 7082800 0 9140200 5830300 13509000 6153300 7003300 16370000 18991000 13475000 0 13953000 12355000 25995000 39728 3102 35474 331535;331536;331537;331538;331539;331540;331541;331542;331543;331544;331545;331546;331547 262721;262722;262723;262724;262725;262726 262724 6 PGDLVGVNK Unmodified 897.49198 0.4919813 1066 P17980 PSMC3 26S protease regulatory subunit 6A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.9 3.81 3 1 6 1 2 1 1 1 1 1 1 1 29.858 28.303 2 0.0048921 30922 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 117.4 52.745 507830000 7752800 213370000 3580300 0 0 0 0 0 0 54112000 57291000 47265000 39196000 36431000 48828000 39729 1066 35475 331548;331549;331550;331551;331552;331553;331554;331555;331556;331557 262727;262728;262729;262730;262731;262732;262733;262734;262735;262736 262728 10 PGDQLVSVNK Unmodified 1055.5611 0.56112349 3022 Q6ZWJ1 STXBP4 Syntaxin-binding protein 4 yes yes 0 0 0 By MS/MS 2 0 1 1 36.966 32.051 2 1.1409E-05 42023 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 132.88 104.18 17635000 0 17635000 0 0 0 0 0 0 0 0 0 0 0 0 0 39730 3022 35476 331558 262737;262738 262738 2 PGDRVAIEPGAPRENDEFCK Unmodified 2256.0593 0.059329153 2045 Q00796 SORD Sorbitol dehydrogenase yes yes 0 0 2 By MS/MS By MS/MS 2 0 4 2 2 53.922 47.888 3;4 2.8173E-06 65447 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.997 54.288 145280000 89724000 0 55554000 0 0 0 0 0 0 0 0 0 0 0 0 39731 2045 35477 331559;331560;331561;331562 262739;262740;262741 262740 2 PGDSEVSASAASLLEEQQSAQLPQAPPQTSDSVK Unmodified 3451.6591 0.6590658 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 81.842 81.951 3 2.6876E-38 94791 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 64.914 59.595 45371000 0 0 0 0 4176500 0 0 2996300 4095100 8841100 7633100 6291700 0 3351300 7985800 39732 1364 35478 331563;331564;331565;331566;331567;331568;331569;331570 262742;262743;262744;262745;262746;262747 262742 6 PGEAVAARK Unmodified 897.50321 0.50321468 778 P04183 TK1 Thymidine kinase, cytosolic yes yes 0 0 1 By MS/MS By matching By matching 2 0 3 1 1 1 7.0122 4.0203 2 0.0043916 7230 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 131.03 43.003 53119000 43077000 5030200 5012000 0 0 0 0 0 0 0 0 0 0 0 0 39733 778 35479 331571;331572;331573 262748 262748 1 PGECLRVRGEVAPDAK Unmodified 1752.8941 0.89410173 881 P09382 LGALS1 Galectin-1 yes yes 0 0 2 By MS/MS 2 0 1 1 43.52 36.726 4 0.020345 50656 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 32.341 20.317 38678000 38678000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39734 881 35480 331574 262749 262749 1 PGELRGGGGGGQGAEGPPGTPR Unmodified 1959.9511 0.95109933 3519 Q8TER5 ARHGEF40 Rho guanine nucleotide exchange factor 40 yes yes 0 0 1 By MS/MS 10 0 1 1 60.565 60.757 3 0.012484 69483 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 29.766 19.281 42232000 0 0 0 0 0 0 0 0 0 0 0 0 42232000 0 0 39735 3519 35481 331575 262750 262750 0 PGEPSWPCPWGK Unmodified 1396.6234 0.62340617 1579 P49589 CARS Cysteine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 79.834 76.298 2 0.00033344 94720 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.087 85.129 29180000 0 26900000 2280400 0 0 0 0 0 0 0 0 0 0 0 0 39736 1579 35482 331576;331577;331578;331579 262751;262752;262753 262751 3 PGESSGEGLRPQMASSK Unmodified 1716.8101 0.81009732 2558 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 28.737 29.125 3 0.00015333 30445 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 52.784 36.1 112290000 0 0 0 0 0 0 11137000 0 0 14892000 20943000 13579000 15923000 17063000 18753000 39737 2558 35483 331580;331581;331582;331583;331584;331585;331586;331587 262754;262755;262756;262757;262758;262759;262760;262761 262759 8 PGETEEPRPPEQQDQEGGEAAK Unmodified 2378.0622 0.062225504 3898 Q96JP5 ZFP91 E3 ubiquitin-protein ligase ZFP91 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 27.11 26.661 3 8.6314E-191 27983 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 206.01 193.74 594250000 0 30723000 0 28631000 38958000 58233000 45115000 32107000 37279000 45490000 54920000 61195000 66729000 46403000 48471000 39738 3898 35484 331588;331589;331590;331591;331592;331593;331594;331595;331596;331597;331598;331599;331600;331601;331602 262762;262763;262764;262765;262766;262767;262768;262769;262770;262771;262772;262773;262774;262775;262776;262777;262778;262779;262780;262781;262782;262783;262784;262785;262786;262787;262788 262770 27 PGEYSYFSPR Unmodified 1201.5404 0.54038805 2467 Q15003 NCAPH Condensin complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 54.181 54.298 2 0.018247 60448 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.283 25.808 12719000 0 0 0 0 0 5336900 3454000 0 0 0 0 0 0 3927800 0 39739 2467 35485 331603;331604;331605;331606;331607 262789;262790;262791;262792 262790 4 PGFFNLESSNPR Unmodified 1363.6521 0.65206377 933 P11047 LAMC1 Laminin subunit gamma-1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 74.194 74.388 2 0.0035197 85276 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.167 42.358 20544000 0 0 0 0 0 0 2562900 0 3497000 2392700 0 2799400 0 2994100 6297500 39740 933 35486 331608;331609;331610;331611;331612;331613 262793 262793 1 PGFLDLK Unmodified 788.44324 0.44324019 5201 Q9Y4G6 TLN2 Talin-2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 75.393 69.785 2 0.040529 91488 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.462 15.659 25667000 18251000 0 7415900 0 0 0 0 0 0 0 0 0 0 0 0 39741 5201 35487 331614;331615 262794;262795 262794 2 PGGCFVAK Unmodified 834.40581 0.40580882 4873 Q9UET6 FTSJ1 Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase yes yes 0 0 0 By MS/MS 2 0 1 1 24.809 19.732 2 0.020111 28087 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.121 56.972 13521000 13521000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39742 4873 35488 331616 262796 262796 1 PGGDTIFGK Unmodified 890.44978 0.44978213 1599 P49773 HINT1 Histidine triad nucleotide-binding protein 1 yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS 10 0 5 1 1 1 1 1 38.765 39.282 2 0.010678 42389 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.961 33.794 35299000 0 0 0 0 0 0 0 0 0 0 7806500 6566800 1353400 5291700 14281000 39743 1599 35489 331617;331618;331619;331620;331621 262797 262797 1 PGGFGMGSK Unmodified 836.38507 0.38507338 452 O75061 DNAJC6 Putative tyrosine-protein phosphatase auxilin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 26.425 25.998 2 0.02999 35315 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.692 40.583 63911000 38134000 0 0 0 0 0 0 2594800 2501000 3198700 6051100 4180100 3992200 3259600 0 39744 452 35490 331622;331623;331624;331625;331626;331627;331628;331629 262798;262799 262798 2 PGGFLVIMDALK Oxidation (M) 1275.6897 0.68969482 1411 P40261 NNMT Nicotinamide N-methyltransferase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 86.744 85.703 2 0.0023435 99666 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 60.064 49.235 24984000 4476600 0 0 0 0 4467900 0 0 1337500 3238200 2863800 3434100 0 0 5166000 39745 1411 35491 331630;331631;331632;331633;331634;331635;331636 262800;262801;262802;262803;262804 262801 2219 5 PGGFLVIMDALK Unmodified 1259.6948 0.6947802 1411 P40261 NNMT Nicotinamide N-methyltransferase yes yes 0 0 0 By MS/MS 10 0 1 1 96.077 96.231 2 0.014236 111626 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.635 34.241 1490800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1490800 39746 1411 35491 331637 262805 262805 1 PGGGALVLLEA Unmodified 995.56515 0.56514624 2052 Q01415 GALK2 N-acetylgalactosamine kinase yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 90.254 86.576 2 0.0086722 107210 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.422 52.277 48758000 0 44366000 4391400 0 0 0 0 0 0 0 0 0 0 0 0 39747 2052 35492 331638;331639 262806 262806 1 PGGGPGLSTPGGHPKPPHR Unmodified 1801.9336 0.93359877 1151 P23246 SFPQ Splicing factor, proline- and glutamine-rich yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 26.017 26.275 4 0.015074 27230 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 19.036 9.2479 90648000 0 0 0 0 0 16567000 7631200 5391500 7678800 12502000 6747400 16984000 10344000 6802600 0 39748 1151 35493 331640;331641;331642;331643;331644;331645;331646;331647;331648 262807;262808 262808 2 PGGLGSSSLYGLGASRPR Unmodified 1730.9064 0.90638097 69;88 CON__P08729;CON__Q3KNV1;P08729 KRT7 Keratin, type II cytoskeletal 7 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 62.912 62.855 3 0.0021326 71981 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 24.714 13.443 + 31630000 0 0 0 0 3970600 12082000 7787900 7789700 0 0 0 0 0 0 0 39749 69;88 35494 331649;331650;331651;331652 262809;262810 262809 1 PGGLLLGDVAPNFEANTTVGR Unmodified 2097.0855 0.085467549 1261 P30041 PRDX6 Peroxiredoxin-6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 2 2 1 2 2 2 2 1 2 2 88.203 88.324 2;3 2.0966E-63 102288 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 140.16 134.03 322410000 0 0 0 0 1598100 5617800 3634200 2273600 5546300 32062000 43393000 28800000 1248900 20517000 177720000 39750 1261 35495 331653;331654;331655;331656;331657;331658;331659;331660;331661;331662;331663;331664;331665;331666;331667;331668;331669;331670;331671 262811;262812;262813;262814;262815;262816;262817;262818;262819;262820;262821;262822;262823;262824;262825;262826;262827 262815 13 PGGNVEGATQSLAEQMR Unmodified 1743.821 0.82099636 2303 Q13501 SQSTM1 Sequestosome-1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 2 1 1 2 2 2 2 2 2 63.089 63.35 2;3 2.3672E-38 72454 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 181.98 156.54 126230000 0 0 0 0 0 15861000 0 0 4771500 16207000 15471000 21827000 12283000 13591000 26218000 39751 2303 35496 331672;331673;331674;331675;331676;331677;331678;331679;331680;331681;331682;331683;331684;331685;331686;331687 262828;262829;262830;262831;262832;262833;262834 262828 7 PGGNVEGATQSLAEQMRK Unmodified 1871.916 0.91595938 2303 Q13501 SQSTM1 Sequestosome-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59.412 58.227 3 2.4033E-207 65162 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 228.23 222.8 397860000 99577000 48725000 15607000 0 0 30361000 9841100 14292000 21940000 21565000 23809000 24834000 21301000 29570000 36441000 39752 2303 35497 331688;331689;331690;331691;331692;331693;331694;331695;331696;331697;331698;331699;331700;331701;331702 262835;262836;262837;262838;262839;262840;262841;262842;262843;262844;262845;262846;262847;262848;262849;262850;262851;262852 262839 17 PGGNVEGATQSLAEQMRK Oxidation (M) 1887.9109 0.910874 2303 Q13501 SQSTM1 Sequestosome-1 yes yes 0 1 1 By MS/MS 2 0 1 1 44.798 37.933 3 9.2173E-05 52148 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.24 48.356 17663000 17663000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39753 2303 35497 331703 262853 262853 3768 1 PGGQGDAIQLSPK Unmodified 1266.6568 0.65681479 2819 Q5VV41 ARHGEF16 Rho guanine nucleotide exchange factor 16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.12 3.26 1 1 6 2 1 1 1 1 1 1 42.556 41.536 2 4.6126E-22 53618 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 187.35 145.02 90849000 0 40973000 0 0 0 0 0 0 5018200 8883700 9571000 0 7721900 6123700 12557000 39754 2819 35498 331704;331705;331706;331707;331708;331709;331710;331711 262854;262855;262856;262857;262858;262859;262860;262861 262857 8 PGGSDFLMK Oxidation (M) 966.44807 0.44806757 365 O43768 ENSA Alpha-endosulfine yes yes 0 1 0 By MS/MS By MS/MS 2.67 0.471 1 2 1 2 40.715 35.7 2 0.0047801 46474 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.01 79.674 532530000 1614300 530910000 0 0 0 0 0 0 0 0 0 0 0 0 0 39755 365 35499 331712;331713;331714 262862;262863 262863 464 2 PGGSDFLMK Unmodified 950.45315 0.45315295 365 O43768 ENSA Alpha-endosulfine yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.57 3.96 3 4 1 1 1 1 1 1 1 51.372 49.116 2 0.003452 54302 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 104.06 82.286 667510000 25833000 550230000 19848000 0 0 0 0 0 0 0 10571000 13731000 0 14445000 32849000 39756 365 35499 331715;331716;331717;331718;331719;331720;331721 262864;262865;262866;262867;262868;262869;262870;262871;262872 262867 8 PGGSEPPAVFTGDTLFVAGCGK Unmodified 2163.0307 0.030654786 2635 Q16775 HAGH Hydroxyacylglutathione hydrolase, mitochondrial yes yes 0 0 0 By MS/MS 2.5 0.5 2 2 4 89.579 85.526 2;3 5.4406E-153 106312 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 213.52 200.96 127640000 0 127640000 0 0 0 0 0 0 0 0 0 0 0 0 0 39757 2635 35500 331722;331723;331724;331725 262873;262874;262875 262873 3 PGGSFVPEQDPVTK Unmodified 1456.7198 0.71980898 2726 Q5H9F3 BCORL1 BCL-6 corepressor-like protein 1 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 52.559 52.677 2 0.0016893 59581 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 76.843 64.267 22927000 0 0 0 2453200 0 0 1398500 0 1303100 4831100 0 9397100 3544400 0 0 39758 2726 35501 331726;331727;331728;331729;331730;331731 262876;262877;262878 262876 3 PGGSLDNSEQK Unmodified 1130.5204 0.52038089 5239 Q9Y5L4 TIMM13 Mitochondrial import inner membrane translocase subunit Tim13 yes yes 0 0 0 By MS/MS 2 0 1 1 9.1949 5.9401 2 3.9454E-158 8555 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 256.24 211.85 20055000 0 20055000 0 0 0 0 0 0 0 0 0 0 0 0 0 39759 5239 35502 331732 262879 262879 1 PGGSSPPAHPSLPGDGLTAK Unmodified 1841.9272 0.92717599 2390 Q14202 ZMYM3 Zinc finger MYM-type protein 3 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 58.717 52.67 3 6.3801E-09 71286 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.521 73.733 34351000 24561000 0 9789800 0 0 0 0 0 0 0 0 0 0 0 0 39760 2390 35503 331733;331734 262880;262881;262882 262881 2 PGGTVESGNGEDLTK Unmodified 1459.6791 0.67906638 4954 Q9UK59 DBR1 Lariat debranching enzyme yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 25.086 25.416 2 2.2281E-20 25838 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 116.13 98.904 48119000 0 0 0 0 0 8112000 0 2190600 6113500 3773700 4392500 5437100 3722000 3010500 11367000 39761 4954 35504 331735;331736;331737;331738;331739;331740;331741;331742;331743 262883;262884;262885;262886;262887;262888;262889;262890;262891 262885 9 PGGVGAPSSSSPSPSPSAR Unmodified 1680.8067 0.80672651 3663 Q92797 SYMPK Symplekin yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 30.943 31.143 2 1.1332E-06 33746 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 101.39 75.743 34503000 0 0 0 0 2299600 4283000 3635800 0 6234300 0 2916300 7370200 5251200 2513100 0 39762 3663 35505 331744;331745;331746;331747;331748;331749;331750;331751 262892;262893;262894;262895;262896;262897 262894 5 PGGVGTGLGGSSGTETLEK Unmodified 1702.8374 0.83735793 2879 Q6GQQ9 OTUD7B OTU domain-containing protein 7B yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 48.545 47.922 2 0 60897 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 316.32 254.5 268020000 0 111410000 0 5934400 6604000 13319000 9582000 10331000 7685300 18147000 18467000 14304000 15978000 11291000 24962000 39763 2879 35506 331752;331753;331754;331755;331756;331757;331758;331759;331760;331761;331762;331763;331764;331765 262898;262899;262900;262901;262902;262903;262904;262905;262906;262907 262901 10 PGHLQEGFGCVVTNR Unmodified 1669.7995 0.79947306 3405 Q8NC51 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 51.698 51.771 3 0.026141 59763 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 37.438 27.099 101420000 0 0 0 18983000 0 0 0 21540000 0 0 0 0 0 0 60898000 39764 3405 35507 331766;331767;331768 262908;262909;262910 262910 1 PGHPLQPDFFLDEYPEAVSK Unmodified 2285.1004 0.10044891 2997 Q6YN16 HSDL2 Hydroxysteroid dehydrogenase-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 90.101 84.814 3 7.9216E-05 108311 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.81 33.962 39410000 37289000 0 2120800 0 0 0 0 0 0 0 0 0 0 0 0 39765 2997 35508 331769;331770 262911;262912 262911 2 PGHPLYSK Unmodified 897.47085 0.47085192 2730 Q5HYK7 SH3D19 SH3 domain-containing protein 19 yes yes 0 0 0 By MS/MS 2 0 1 1 15.024 10.975 2 0.012959 16301 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.523 60.965 26347000 26347000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39766 2730 35509 331771 262913;262914 262913 2 PGHVSPLQLTNIQVPQQALPTQR Unmodified 2521.3765 0.37650461 1142 P22670 RFX1 MHC class II regulatory factor RFX1 yes yes 0 0 0 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 82.623 82.751 3 0.00091242 95537 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.882 29.784 19541000 0 0 0 0 0 2097200 0 2694400 0 3363500 0 0 0 0 11386000 39767 1142 35510 331772;331773;331774;331775 262915 262915 1 PGIFYQQTLPESHLPK Unmodified 1853.9676 0.96758424 3492 Q8TCU4 ALMS1 Alstrom syndrome protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 81.734 73.604 3 2.8804E-05 96437 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.478 87.698 19002000 19002000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39768 3492 35511 331776 262916 262916 1 PGIFYQQTLPGSHIPEEAQK Unmodified 2239.1273 0.12733236 3492 Q8TCU4 ALMS1 Alstrom syndrome protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 80.722 72.592 3 1.4278E-08 95220 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.11 70.115 9154900 9154900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39769 3492 35512 331777 262917 262917 1 PGILGNFEPK Unmodified 1070.576 0.57604528 3126 Q86SF2 GALNT7 N-acetylgalactosaminyltransferase 7 yes yes 0 0 0 By MS/MS 10 0 1 1 78.68 78.853 2 0.0096298 91261 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 80.229 0.063674 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39770 3126 35513 331778 262918 262918 1 PGIVELPTLEELK Unmodified 1436.8126 0.81264673 1678 P51970 NDUFA8 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.42 3.66 3 1 8 1 2 1 1 1 1 1 1 1 1 1 90.727 89.129 2 2.4755E-13 112147 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 123.79 102.82 134040000 5713900 101380000 3853000 0 0 0 1800200 1262600 2091700 4286500 4320500 0 0 2549200 6783800 39771 1678 35514 331779;331780;331781;331782;331783;331784;331785;331786;331787;331788;331789;331790 262919;262920;262921;262922;262923;262924;262925;262926;262927;262928;262929 262925 10 PGLEQPEVEATK Unmodified 1296.6561 0.65614609 2096 Q03426 MVK Mevalonate kinase yes yes 0 0 0 By MS/MS 2 0 1 1 43.735 38.516 2 1.9047E-13 50322 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 161.19 137.84 27668000 0 27668000 0 0 0 0 0 0 0 0 0 0 0 0 0 39772 2096 35515 331791 262930 262930 0 PGLGQIEEENEGAGFK Unmodified 1673.7897 0.78967946 2418 Q14596 NBR1 Next to BRCA1 gene 1 protein yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 63.676 63.156 2 0.00016342 72763 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 67.252 58.297 2594200 0 0 0 0 2594200 0 0 0 0 0 0 0 0 0 0 39773 2418 35516 331792;331793 262931;262932 262931 2 PGLNAILGPTGGGK Unmodified 1250.6983 0.69828568 5039 Q9UNQ0 ABCG2 ATP-binding cassette sub-family G member 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 69.479 69.237 2 3.9759E-05 79778 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 105.46 94.937 42988000 0 1827200 0 2695600 2929500 3702300 3045800 2625800 0 3247500 4090900 5942800 3573100 2886700 6420800 39774 5039 35517 331794;331795;331796;331797;331798;331799;331800;331801;331802;331803;331804;331805;331806 262933;262934;262935;262936;262937;262938;262939;262940;262941;262942;262943;262944;262945 262942 13 PGLNVVLEGPK Unmodified 1121.6445 0.64445919 4066 Q99848 EBNA1BP2 Probable rRNA-processing protein EBP2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.08 3.33 2 1 9 2 1 1 1 1 1 1 1 1 1 1 71.63 70.748 2 0.0095141 80806 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 50.452 38.731 95634000 0 42853000 2625800 0 3417400 5718700 3523000 0 5319700 6271000 6334600 6684500 6852600 6033600 0 39775 4066 35518 331807;331808;331809;331810;331811;331812;331813;331814;331815;331816;331817;331818 262946;262947;262948;262949;262950;262951;262952;262953;262954;262955 262954 9 PGLNVVLEGPKK Unmodified 1249.7394 0.73942221 4066 Q99848 EBNA1BP2 Probable rRNA-processing protein EBP2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 57.79 57.154 3 0.00028222 64454 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 57.164 43.355 101010000 20625000 0 0 0 8046900 0 5096100 0 6681800 6844500 10059000 12331000 7211800 8019500 16099000 39776 4066 35519 331819;331820;331821;331822;331823;331824;331825;331826;331827;331828 262956;262957;262958;262959;262960;262961;262962;262963;262964;262965;262966;262967 262961 11 PGLQNMELAPVQRK Unmodified 1579.8504 0.850446 2920 Q6P1M3 LLGL2 Lethal(2) giant larvae protein homolog 2 yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 19.968 19.921 4 0.0037284 20069 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 25.647 13.956 2999700 0 0 0 0 1026800 0 0 0 1972900 0 0 0 0 0 0 39777 2920 35520 331829;331830 262968 262968 1 PGLTIQAPQLEVSVPSANIEGLEGK Unmodified 2546.3592 0.35918279 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 3 1 94.791 90.936 3 1.9867E-31 112666 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.11 98.716 93700000 0 91677000 2022400 0 0 0 0 0 0 0 0 0 0 0 0 39778 2172 35521 331831;331832;331833;331834 262969;262970;262971;262972;262973;262974 262970 6 PGLVDSNPAPPESQEK Unmodified 1663.8053 0.80532952 2364 Q14061 COX17 Cytochrome c oxidase copper chaperone yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 5.57 3.85 3 1 3 1 3 1 1 1 45.438 41.651 2;3 1.8715E-72 53411 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 194.24 176.05 219270000 11409000 198370000 0 0 0 0 0 0 0 0 6103800 0 0 3386900 0 39779 2364 35522 331835;331836;331837;331838;331839;331840;331841 262975;262976;262977;262978;262979;262980;262981;262982;262983;262984;262985 262975 11 PGMNGAGFQK Oxidation (M) 1021.4651 0.46511462 583 O94776 MTA2 Metastasis-associated protein MTA2 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 13.067 13.21 2 0.0011576 12378 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 95.352 76.57 31467000 0 0 0 0 2666500 6439000 3686500 3237500 3189800 0 0 4059400 0 3324900 4863900 39780 583 35523 331842;331843;331844;331845;331846;331847;331848;331849 262986;262987;262988 262986 743 3 PGMNGAGFQK Unmodified 1005.4702 0.4702 583 O94776 MTA2 Metastasis-associated protein MTA2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 2 1 1 1 1 1 1 1 1 1 27.216 26.506 2 0.001553 28181 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 93.195 71.268 206950000 74479000 73603000 0 0 5179700 9520200 4497400 5258200 5495800 6379700 5711400 9744200 0 0 7077700 39781 583 35523 331850;331851;331852;331853;331854;331855;331856;331857;331858;331859;331860;331861;331862;331863 262989;262990;262991;262992;262993;262994;262995;262996;262997;262998;262999;263000;263001 262999 12 PGMVVTFAPVNVTTEVK Oxidation (M) 1803.9441 0.94407161 1960 P68104;Q5VTE0 EEF1A1;EEF1A1P5 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3 yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.98 3.74 12 7 29 4 11 4 3 2 3 2 2 3 3 3 2 2 2 2 81.506 80.706 2;3 1.765E-205 93169 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 225.63 211.07 15374000000 11999000 8559800000 75115000 188440000 354770000 1083800000 335330000 377780000 522330000 947880000 734910000 562660000 228540000 427600000 963410000 39782 1960 35524 331864;331865;331866;331867;331868;331869;331870;331871;331872;331873;331874;331875;331876;331877;331878;331879;331880;331881;331882;331883;331884;331885;331886;331887;331888;331889;331890;331891;331892;331893;331894;331895;331896;331897;331898;331899;331900;331901;331902;331903;331904;331905;331906;331907;331908;331909;331910;331911 263002;263003;263004;263005;263006;263007;263008;263009;263010;263011;263012;263013;263014;263015;263016;263017;263018;263019;263020;263021;263022;263023;263024;263025;263026;263027;263028;263029;263030;263031;263032;263033;263034;263035;263036;263037;263038;263039;263040;263041;263042;263043;263044;263045;263046;263047;263048;263049 263005 3146 38 PGMVVTFAPVNVTTEVK Unmodified 1787.9492 0.94915699 1960 P68104;Q5VTE0 EEF1A1;EEF1A1P5 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.12 3.72 8 4 20 3 7 2 1 2 3 1 1 1 3 2 1 1 2 2 88.096 86.273 2;3 1.058E-54 107251 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 193.81 176.15 4558500000 938090000 3456800000 53770000 2665700 6984500 11538000 2334300 6751900 5343100 18247000 12251000 7353600 3006800 6455700 26936000 39783 1960 35524 331912;331913;331914;331915;331916;331917;331918;331919;331920;331921;331922;331923;331924;331925;331926;331927;331928;331929;331930;331931;331932;331933;331934;331935;331936;331937;331938;331939;331940;331941;331942;331943 263050;263051;263052;263053;263054;263055;263056;263057;263058;263059;263060;263061;263062;263063;263064;263065;263066;263067;263068;263069;263070;263071;263072;263073;263074;263075;263076;263077;263078;263079;263080;263081;263082;263083;263084;263085 263057 34 PGNFPSLAVSSNEFEPSNSHMVK Unmodified 2474.1536 0.15362347 2477 Q15022 SUZ12 Polycomb protein SUZ12 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 84.043 77.617 3 2.4164E-158 99366 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 175.77 168.19 62936000 44977000 17958000 0 0 0 0 0 0 0 0 0 0 0 0 0 39784 2477 35525 331944;331945 263086;263087 263087 2 PGNFPSLAVSSNEFEPSNSHMVK Oxidation (M) 2490.1485 0.14853809 2477 Q15022 SUZ12 Polycomb protein SUZ12 yes yes 0 1 0 By MS/MS 2 0 1 1 81.749 73.619 3 9.1117E-69 96423 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 139.51 124.26 45838000 45838000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39785 2477 35525 331946 263088 263088 4086 1 PGNGQPPVPEK Unmodified 1118.572 0.57202253 3912 Q96KQ7 EHMT2 Histone-lysine N-methyltransferase EHMT2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.89 22.098 2 0.0080109 22700 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 52.591 36.442 79280000 0 0 0 6067300 3377900 6113300 6645000 4571000 6389600 6265600 8968800 9656800 7503900 5778200 7942500 39786 3912 35526 331947;331948;331949;331950;331951;331952;331953;331954;331955;331956;331957;331958 263089;263090;263091 263090 3 PGNPPAEIGQNISSNSSASILESK Unmodified 2396.1819 0.18194671 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 74.603 73.895 3 2.3149E-171 90721 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 213.82 205.16 425380000 0 291990000 6337700 3044700 0 25991000 4972300 7231900 11930000 11136000 10350000 10524000 6109900 11423000 24337000 39787 848 35527 331959;331960;331961;331962;331963;331964;331965;331966;331967;331968;331969;331970;331971;331972 263092;263093;263094;263095;263096;263097;263098;263099;263100;263101;263102;263103;263104 263096 13 PGNQNTQVTEAWNK Unmodified 1585.7485 0.74848335 5067 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.47 3.59 3 2 10 1 4 1 1 1 1 1 1 1 1 1 1 40.792 39.164 2;3 0 42844 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 316.34 298.91 1584600000 30427000 1415300000 0 2724900 0 4539200 2583800 3583300 2284000 5204000 20084000 17389000 0 16954000 63462000 39788 5067 35528 331973;331974;331975;331976;331977;331978;331979;331980;331981;331982;331983;331984;331985;331986;331987 263105;263106;263107;263108;263109;263110;263111;263112;263113;263114;263115;263116;263117 263109 12 PGNVQQSVNRK Unmodified 1225.6527 0.65273247 700 O95835 LATS1 Serine/threonine-protein kinase LATS1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 7.3443 7.4859 3 0.0025656 5525 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 52.693 29.32 74807000 0 0 0 5326400 0 7022900 7528700 6159800 7131600 1402700 19529000 7470200 1961600 0 11274000 39789 700 35529 331988;331989;331990;331991;331992;331993;331994;331995;331996;331997;331998 263118;263119;263120;263121;263122 263121 5 PGPAFPQQVPLVQQGSR Unmodified 1804.9584 0.95841654 2975 Q6UUV7 CRTC3 CREB-regulated transcription coactivator 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching 10 0 15 2 2 2 2 2 1 2 2 76.559 76.583 2;3 0.00013127 88200 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 72.29 56.751 58168000 0 0 0 4803300 4837700 0 7946500 6311600 0 0 8481100 0 2742100 6725000 16320000 39790 2975 35530 331999;332000;332001;332002;332003;332004;332005;332006;332007;332008;332009;332010;332011;332012;332013 263123;263124;263125;263126 263123 4 PGPALWPLPLSVK Unmodified 1373.8071 0.80710784 845 P07686 HEXB Beta-hexosaminidase subunit beta;Beta-hexosaminidase subunit beta chain B;Beta-hexosaminidase subunit beta chain A yes yes 0 0 0 By MS/MS 10 0 1 1 93.608 93.749 2 0.015532 108704 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.608 46.388 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39791 845 35531 332014 263127 263127 1 PGPDTFPDYGDVLR Unmodified 1547.7256 0.72562264 4872 Q9UER7 DAXX Death domain-associated protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.891 79.938 2 1.7464E-11 91999 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 98.156 80.097 58137000 0 0 0 2103800 2970700 10551000 2663400 0 5697800 5571900 4058800 5002300 3963200 4870200 10684000 39792 4872 35532 332015;332016;332017;332018;332019;332020;332021;332022;332023;332024;332025 263128;263129;263130;263131;263132;263133;263134;263135;263136;263137;263138 263133 11 PGPELGGEFPVQDLK Unmodified 1581.8039 0.80387296 3590 Q8WXG6 MADD MAP kinase-activating death domain protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 80.685 80.163 2 4.2313E-56 99143 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 167.3 144.61 362790000 0 167170000 0 4813900 9000300 20655000 9600800 10353000 13667000 24457000 17751000 21429000 15662000 17842000 30388000 39793 3590 35533 332026;332027;332028;332029;332030;332031;332032;332033;332034;332035;332036;332037;332038;332039 263139;263140;263141;263142;263143;263144;263145;263146;263147;263148;263149;263150;263151;263152;263153 263142 15 PGPFLLSGSR Unmodified 1029.5607 0.56072956 1471 P43034 PAFAH1B1 Platelet-activating factor acetylhydrolase IB subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 65.668 65.722 2 0.0040471 75078 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 74.269 39.337 61707000 0 0 0 4481300 1674900 0 0 0 0 0 10192000 10496000 0 9201700 25660000 39794 1471 35534 332040;332041;332042;332043;332044;332045 263154;263155;263156 263154 3 PGPFLLSGSRDK Unmodified 1272.6826 0.68263561 1471 P43034 PAFAH1B1 Platelet-activating factor acetylhydrolase IB subunit alpha yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 51.716 52.088 3 0.00047163 57685 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.739 64.101 36885000 0 0 0 0 0 0 0 3119300 0 0 7893700 0 0 6223100 19649000 39795 1471 35535 332046;332047;332048;332049 263157;263158;263159;263160 263158 4 PGPGSPSHPGALDLDGVSR Unmodified 1814.8911 0.89112484 10 A1X283 SH3PXD2B SH3 and PX domain-containing protein 2B yes yes 0 0 0 By MS/MS 10 0 1 1 55.318 55.943 3 0.031834 62794 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 20.743 0 6627900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6627900 39796 10 35536 332050 263161 263161 1 PGPITLTVAK Unmodified 995.60153 0.60153174 3700 Q92997 DVL3 Segment polarity protein dishevelled homolog DVL-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8 3.46 3 9 1 1 1 1 1 1 1 1 1 1 1 1 62.077 60.684 2 0.032834 81369 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.859 29.685 71448000 18902000 13157000 1424900 0 1485700 5951600 2401000 2424000 3345000 4451100 4024100 0 0 4713600 9167700 39797 3700 35537 332051;332052;332053;332054;332055;332056;332057;332058;332059;332060;332061;332062 263162;263163 263163 2 PGPIVIELYK Unmodified 1127.659 0.65904662 3758 Q96BJ3 AIDA Axin interactor, dorsalization-associated protein yes yes 0 0 0 By MS/MS 2 0 1 1 86.894 78.763 2 0.013842 102621 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.256 50.469 6683400 6683400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39798 3758 35538 332063 263164 263164 1 PGPIVLTVAK Unmodified 993.62227 0.62226719 198 O14641 DVL2 Segment polarity protein dishevelled homolog DVL-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.53 3 2 11 2 2 1 1 1 1 1 1 1 1 1 1 1 1 67.925 66.281 2 0.0030212 85671 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.582 79.806 131830000 33809000 25307000 3849400 3336700 2497100 7950900 3499600 2924200 4700600 8900700 6810400 0 5821200 9002300 13420000 39799 198 35539 332064;332065;332066;332067;332068;332069;332070;332071;332072;332073;332074;332075;332076;332077;332078;332079 263165;263166;263167;263168;263169;263170;263171;263172;263173;263174;263175;263176;263177;263178 263168 14 PGPLPSSLDDLK Unmodified 1237.6554 0.65541781 4995 Q9ULH7 MKL2 MKL/myocardin-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 7 3.69 1 1 3 2 1 1 1 78.542 74.465 2 1.4681E-14 92856 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 144.28 111.53 50871000 0 50871000 0 0 0 0 0 0 0 0 0 0 0 0 0 39800 4995 35540 332080;332081;332082;332083;332084 263179;263180;263181;263182 263180 4 PGPNIESGNEDDDASFK Unmodified 1790.7595 0.75950154 437 O60841 EIF5B Eukaryotic translation initiation factor 5B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS 8.12 3.26 1 1 6 2 1 1 1 1 1 1 46.623 45.597 2 5.6255E-35 56817 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 155.98 122.89 52504000 0 22352000 0 0 0 9054900 0 0 3639200 0 3934700 3581800 0 4084200 5856900 39801 437 35541 332085;332086;332087;332088;332089;332090;332091;332092 263183;263184;263185;263186 263184 4 PGPQALPK Unmodified 806.46504 0.46503826 5066 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.672 24.875 2 0.025448 26342 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 58.687 28.845 220030000 0 0 0 19571000 9939800 13871000 12381000 17519000 13884000 15738000 17160000 29368000 20732000 16116000 33747000 39802 5066 35542 332093;332094;332095;332096;332097;332098;332099;332100;332101;332102;332103;332104 263187;263188;263189;263190 263188 2 PGPQAQGLVMEAATHSQGDGSTDLDSK Unmodified 2696.2348 0.23478692 2993 Q6XZF7 DNMBP Dynamin-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 68.662 68.875 3 5.4063E-60 78445 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 106.93 94.001 35351000 0 0 0 0 0 6650900 0 4406100 0 0 8526900 0 3980700 0 11787000 39803 2993 35543 332105;332106;332107;332108;332109 263191;263192;263193;263194;263195 263192 5 PGPSAHDLAAQLK Unmodified 1303.6884 0.68844927 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.9 3.81 6 2 12 2 4 2 1 1 1 1 1 1 1 1 1 1 1 1 50.908 48.725 2;3 7.9386E-08 61414 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 124.12 72.283 820780000 260600000 186560000 68938000 13642000 16466000 40815000 20760000 17308000 19996000 24225000 29957000 27661000 33105000 24494000 36253000 39804 619 35544 332110;332111;332112;332113;332114;332115;332116;332117;332118;332119;332120;332121;332122;332123;332124;332125;332126;332127;332128;332129 263196;263197;263198;263199;263200;263201;263202;263203;263204;263205;263206;263207;263208;263209;263210;263211;263212;263213 263208 14 PGPSELPLSDYPLR Unmodified 1539.7933 0.79330827 3017 Q6ZUT9 DENND5B DENN domain-containing protein 5B yes yes 0 0 0 By MS/MS By matching By matching By matching By matching 10 0 5 1 1 1 1 1 80.383 80.317 2 0.026047 93234 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 33.409 18.99 12501000 0 0 0 1318200 2035300 0 0 3640500 0 0 0 0 2651100 2856000 0 39805 3017 35545 332130;332131;332132;332133;332134 263214 263214 1 PGPSHNQAANDIVNPR Unmodified 1685.8234 0.82337962 4696 Q9NWF9 RNF216 E3 ubiquitin-protein ligase RNF216 yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 29.954 30.128 3 0.0061839 32807 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 37.177 22.922 10526000 0 0 0 0 0 0 2900400 3585700 0 0 0 0 0 4039900 0 39806 4696 35546 332135;332136;332137 263215;263216 263215 2 PGPTAESASGPSEDPSVNFLK Unmodified 2085.9855 0.98547873 2303 Q13501 SQSTM1 Sequestosome-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 72.463 72.53 2 3.4778E-63 82944 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 172.57 145.6 78558000 0 0 0 6182100 5794700 0 8211900 0 4821100 11261000 8880400 10629000 7288000 6124300 9365100 39807 2303 35547 332138;332139;332140;332141;332142;332143;332144;332145;332146;332147;332148 263217;263218;263219;263220;263221;263222;263223;263224;263225;263226;263227;263228 263221 12 PGPTPSGTNVGSSGR Unmodified 1369.6586 0.65860571 1810 P60468 SEC61B Protein transport protein Sec61 subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.137 21.343 2 5.0228E-20 21691 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 113.65 102.06 158880000 0 0 0 8867900 10980000 10445000 12864000 11264000 10358000 13741000 17553000 20307000 15077000 11996000 15431000 39808 1810 35548 332149;332150;332151;332152;332153;332154;332155;332156;332157;332158;332159;332160 263229;263230;263231;263232;263233;263234;263235;263236;263237;263238;263239;263240;263241 263239 13 PGPTPSGTNVGSSGRSPSK Unmodified 1768.8704 0.8703894 1810 P60468 SEC61B Protein transport protein Sec61 subunit beta yes yes 0 0 1 By MS/MS 2 0 1 1 23.206 18.309 3 0.0007797 26103 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.384 31.587 10320000 10320000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39809 1810 35549 332161 263242 263242 1 PGPVGPELPPGHIPIQVIR Unmodified 1972.1258 0.12581622 694 O95817 BAG3 BAG family molecular chaperone regulator 3 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 83.001 83.147 3 8.7114E-05 95858 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.246 53.442 20859000 0 0 0 0 0 0 0 0 0 7215800 0 0 0 0 13643000 39810 694 35550 332162;332163 263243;263244 263244 2 PGPVGPELPPGHIPIQVIRK Unmodified 2100.2208 0.22077924 694 O95817 BAG3 BAG family molecular chaperone regulator 3 yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 77.142 77.362 4 0.0056064 88916 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 31.462 27.193 16184000 0 0 0 0 0 0 0 0 2177900 0 0 0 0 0 14006000 39811 694 35551 332164;332165 263245 263245 0 PGPVQVVLVQK Unmodified 1162.7074 0.7073938 2869 Q6DD88 ATL3 Atlastin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66.262 65.232 2 4.3608E-09 86673 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 131.06 109.61 194040000 32122000 8080900 2226700 6173800 8526800 14352000 9469300 8087900 11116000 12466000 13698000 16815000 14143000 13454000 23307000 39812 2869 35552 332166;332167;332168;332169;332170;332171;332172;332173;332174;332175;332176;332177;332178;332179;332180 263246;263247;263248;263249;263250;263251;263252;263253;263254;263255;263256;263257 263252 12 PGQCEIPEPR Unmodified 1181.5499 0.54990688 2781 Q5T749 KPRP Keratinocyte proline-rich protein yes yes 0 0 0 By MS/MS 10 0 1 1 36.462 36.009 2 0.015747 39879 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 59.067 49.287 56669000 0 0 0 56669000 0 0 0 0 0 0 0 0 0 0 0 39813 2781 35553 332181 263258 263258 1 PGQEAPVLPK Unmodified 1034.576 0.57604528 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 40.12 38.977 2 1.8523E-11 49336 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 160.82 137.89 1651100000 26714000 1319400000 4892100 10587000 9544200 13287000 16084000 10456000 11030000 19661000 40379000 37434000 21213000 32158000 78304000 39814 1564 35554 332182;332183;332184;332185;332186;332187;332188;332189;332190;332191;332192;332193;332194;332195;332196;332197 263259;263260;263261;263262;263263;263264;263265;263266;263267;263268;263269;263270;263271;263272;263273;263274;263275 263263 17 PGQEEDGPLK Unmodified 1068.5088 0.50875357 1607 P49848 TAF6 Transcription initiation factor TFIID subunit 6 yes yes 0 0 0 By MS/MS 2 0 1 1 21.323 17.609 2 0.0011676 23081 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.3 70.456 26158000 0 26158000 0 0 0 0 0 0 0 0 0 0 0 0 0 39815 1607 35555 332198 263276 263276 1 PGQFIHTNWTGHGGTVSSSSYNA Unmodified 2404.0832 0.083235718 1680 P52209 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 67.496 63.68 3 1.6426E-23 85490 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 102.48 94.488 195090000 142260000 0 0 0 0 0 0 0 0 0 0 0 0 0 52826000 39816 1680 35556 332199;332200 263277;263278 263278 2 PGQNSFSK Unmodified 863.41373 0.41373097 535 O75717 WDHD1 WD repeat and HMG-box DNA-binding protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 10.471 7.1525 2 0.0041325 9940 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.74 85.193 44610000 0 44610000 0 0 0 0 0 0 0 0 0 0 0 0 0 39817 535 35557 332201;332202 263279 263279 1 PGQTVNNK Unmodified 856.44028 0.44028008 2694 Q52LR7 EPC2 Enhancer of polycomb homolog 2 yes yes 0 0 0 By MS/MS 10 0 1 1 23.771 24.447 2 0.03661 25475 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 51.787 4.2129 6744600 0 0 0 0 0 0 0 0 0 0 0 6744600 0 0 0 39818 2694 35558 332203 263280 263280 1 PGRGTGVNSNSEK Unmodified 1301.6324 0.63239096 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 1 By MS/MS 2 0 1 1 6.2059 2.7737 3 0.0080673 5720 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.592 30.872 48777000 48777000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39819 3443 35559 332204 263281 263281 1 PGRSTTGAPSTTADSK Unmodified 1532.7431 0.74306362 5004 Q9ULT8 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 10.408 6.7406 2;3 0.00020201 11009 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.565 54.765 198850000 173770000 25085000 0 0 0 0 0 0 0 0 0 0 0 0 0 39820 5004 35560 332205;332206;332207 263282;263283;263284;263285;263286;263287 263284 5 PGSDTIKPDVQK Unmodified 1283.6721 0.67213051 2131 Q06830 PRDX1 Peroxiredoxin-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.54 3.64 9 2 24 2 7 2 2 2 2 2 2 2 2 2 2 2 2 2 22.969 21.916 2;3 8.7618E-30 22303 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 218.36 166.61 15503000000 685480000 10632000000 251800000 125810000 62461000 296350000 118820000 87540000 147500000 188740000 407570000 555770000 118950000 379340000 1444700000 39821 2131 35561 332208;332209;332210;332211;332212;332213;332214;332215;332216;332217;332218;332219;332220;332221;332222;332223;332224;332225;332226;332227;332228;332229;332230;332231;332232;332233;332234;332235;332236;332237;332238;332239;332240;332241;332242 263288;263289;263290;263291;263292;263293;263294;263295;263296;263297;263298;263299;263300;263301;263302;263303;263304;263305;263306;263307;263308;263309;263310;263311;263312;263313;263314;263315;263316;263317;263318;263319;263320;263321;263322;263323 263322 23 PGSDTIKPNVDDSK Unmodified 1471.7155 0.71545188 1317 P32119 PRDX2 Peroxiredoxin-2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 4 1 1 1 1 1 1 1 1 1 1 1 1 23.58 22.942 2;3 8.9467E-66 29590 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 237.87 181.31 1966500000 0 1274800000 0 27718000 11112000 22660000 13993000 16757000 16550000 32326000 117030000 131870000 19688000 91744000 190190000 39822 1317 35562 332243;332244;332245;332246;332247;332248;332249;332250;332251;332252;332253;332254;332255;332256;332257;332258 263324;263325;263326;263327;263328;263329;263330;263331;263332;263333;263334;263335;263336;263337;263338;263339;263340 263328 16 PGSETIIPDPAGK Unmodified 1280.6612 0.66123147 2245 Q13162 PRDX4 Peroxiredoxin-4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 56.522 55.197 2 5.8973E-08 63021 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 101.39 90.642 950570000 29413000 724680000 5700900 7763700 6851800 13293000 6712500 7758100 11832000 11781000 27068000 26716000 10430000 17677000 42894000 39823 2245 35563 332259;332260;332261;332262;332263;332264;332265;332266;332267;332268;332269;332270;332271;332272;332273;332274 263341;263342;263343;263344;263345;263346;263347;263348;263349;263350;263351;263352;263353;263354;263355;263356;263357 263350 12 PGSEVLTLLLK Unmodified 1168.7067 0.7067251 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 95.795 90.646 2 3.5665E-12 114389 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 153.97 76.238 20714000 13783000 6215500 715860 0 0 0 0 0 0 0 0 0 0 0 0 39824 2804 35564 332275;332276;332277 263358;263359 263359 2 PGSFQSLSDALSDTPAK Unmodified 1719.8315 0.83154427 4470 Q9H9C1 VIPAS39 Spermatogenesis-defective protein 39 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.023 13.179 3 0.027187 11397 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 33.301 8.77 110760000 0 0 0 5610900 5746900 6747400 7039600 7694700 6256000 11718000 6440100 17927000 12520000 9431800 13632000 39825 4470 35565 332278;332279;332280;332281;332282;332283;332284;332285;332286;332287;332288;332289 263360 263360 0 PGSGVVTASTASSENGAGK Unmodified 1675.8013 0.80130678 4317 Q9H089 LSG1 Large subunit GTPase 1 homolog yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 24.89 24.988 2 0.0019385 25415 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.375 51.422 6792900 0 0 0 0 0 2526600 0 0 2617700 1648600 0 0 0 0 0 39826 4317 35566 332290;332291;332292;332293 263361;263362 263362 2 PGSIDSNNQLFAPGGR Unmodified 1628.7907 0.79068251 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 60.305 60.409 2;3 0 68780 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 416.88 406.51 2723200000 0 0 0 123130000 146230000 260930000 170490000 155700000 208740000 243570000 266510000 307200000 235390000 236130000 369150000 39827 2102 35567 332294;332295;332296;332297;332298;332299;332300;332301;332302;332303;332304;332305;332306;332307;332308;332309;332310;332311;332312;332313;332314;332315;332316;332317 263363;263364;263365;263366;263367;263368;263369;263370;263371;263372;263373;263374;263375;263376;263377;263378;263379;263380;263381;263382;263383;263384;263385;263386;263387;263388;263389;263390;263391;263392;263393;263394;263395;263396;263397;263398;263399;263400 263367 28 PGSLPLNAEACWPK Unmodified 1538.7551 0.75514863 2057 Q01581 HMGCS1 Hydroxymethylglutaryl-CoA synthase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 6.12 3.89 3 1 4 1 2 1 1 1 1 1 79.13 76.714 2 1.2092E-47 94951 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 181.66 147.79 285840000 21729000 241360000 6886600 3404800 4122500 3045200 0 0 0 0 5292300 0 0 0 0 39828 2057 35568 332318;332319;332320;332321;332322;332323;332324;332325 263401;263402;263403;263404;263405;263406;263407;263408 263401 7 PGSNCSPAQSVLSEVPSVPTNGMAK Oxidation (M) 2529.1839 0.18393732 1137 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 1 0 By MS/MS 2 0 1 1 82.906 78.201 3 0.00023905 97144 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 40.142 26.687 24354000 0 24354000 0 0 0 0 0 0 0 0 0 0 0 0 0 39829 1137 35569 332326 263409 263409 1637 1 PGSNCSPAQSVLSEVPSVPTNGMAK Unmodified 2513.189 0.1890227 1137 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 By MS/MS 2 0 1 1 86.131 81.357 3 0.0018329 101128 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 33.047 26.823 37392000 0 37392000 0 0 0 0 0 0 0 0 0 0 0 0 0 39830 1137 35569 332327 263410 263410 1 PGSPLLFDSTLDLETK Unmodified 1731.8931 0.8930819 5045 Q9UNY4 TTF2 Transcription termination factor 2 yes yes 0 0 0 By MS/MS 2 0 1 1 93.61 88.714 2 0.00094219 110203 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.989 73.731 23095000 0 23095000 0 0 0 0 0 0 0 0 0 0 0 0 0 39831 5045 35570 332328 263411 263411 1 PGSQLDSMLGSLQSDLNK Oxidation (M) 1904.915 0.91495633 1558 P49023 PXN Paxillin yes yes 0 1 0 By MS/MS 2 0 1 1 79.94 75.228 2 1.3034E-47 93701 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 161.21 142.58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39832 1558 35571 332329 263412 263412 2473 1 PGSSEAAPSSK Unmodified 1016.4775 0.47745344 1993 P80723 BASP1 Brain acid soluble protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.5 3.72 1 3 1 11 2 2 1 1 1 1 1 1 1 1 1 1 1 1 12.366 12.012 2 1.4971E-136 6135 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 250.75 122.36 474090000 299680000 142630000 8847200 1430400 1450800 4214200 2056400 1664900 3849800 1117800 1893600 0 1334100 1399100 2512900 39833 1993 35572 332330;332331;332332;332333;332334;332335;332336;332337;332338;332339;332340;332341;332342;332343;332344;332345 263413;263414;263415;263416;263417;263418;263419;263420;263421;263422;263423 263420 11 PGSSFAHFGFDEQLMHQIRK Unmodified 2331.1219 0.12186983 3199 Q86XP3 DDX42 ATP-dependent RNA helicase DDX42 yes yes 0 0 1 By MS/MS 2 0 1 1 91.621 83.49 3 0.03238 108262 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 23.1 6.4364 11561000 11561000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39834 3199 35573 332346 263424 263424 1 PGSSLQSFMPEGK Unmodified 1363.6442 0.6442012 3427 Q8NEM2 SHCBP1 SHC SH2 domain-binding protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 73.263 67.718 2 0.042191 85415 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 42.976 15.672 73312000 0 73312000 0 0 0 0 0 0 0 0 0 0 0 0 0 39835 3427 35574 332347 263425 263425 1 PGSSWIPFK Unmodified 1017.5284 0.5283668 3953 Q96Q15 SMG1 Serine/threonine-protein kinase SMG1 yes yes 0 0 0 By MS/MS 2 0 1 1 83.239 75.109 2 0.039846 98223 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.91 42.925 6227300 6227300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39836 3953 35575 332348 263426 263426 1 PGSTPSRPSSAK Unmodified 1170.5993 0.59929991 2549 Q15555 MAPRE2 Microtubule-associated protein RP/EB family member 2 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 17 2 2 1 1 1 1 2 2 1 1 2 1 6.5585 6.6726 3 0.0040173 4768 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 50.275 28.282 118430000 0 0 0 11569000 5601400 8603900 5344000 5197400 9553000 10550000 17562000 10609000 7660800 11945000 14230000 39837 2549 35576 332349;332350;332351;332352;332353;332354;332355;332356;332357;332358;332359;332360;332361;332362;332363;332364;332365 263427;263428;263429;263430;263431 263429 3 PGSVPLVSEK Unmodified 1011.5601 0.56006086 4657 Q9NV06 DCAF13 DDB1- and CUL4-associated factor 13 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.43 2.06 1 13 1 1 1 1 1 2 1 1 1 1 1 1 1 42.263 41.972 2 0.0024913 52991 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.2 67.644 110250000 0 20138000 0 6072800 8345700 9315400 7495900 0 6258000 8099800 7947700 11753000 8063000 6287600 10469000 39838 4657 35577 332366;332367;332368;332369;332370;332371;332372;332373;332374;332375;332376;332377;332378;332379 263432;263433;263434;263435;263436;263437;263438;263439;263440;263441;263442;263443;263444;263445;263446 263436 14 PGSVQPFSK Unmodified 945.49198 0.4919813 4454 Q9H8T0 AKTIP AKT-interacting protein yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 34.743 29.247 2 0.010582 40699 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.862 64.159 98871000 20905000 77967000 0 0 0 0 0 0 0 0 0 0 0 0 0 39839 4454 35578 332380;332381 263447 263447 1 PGSVVSPELQTPLPSPEPSK Unmodified 2045.0681 0.06808615 3897 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 2 1 1 76.798 76.856 2;3 6.7435E-123 88755 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 185.87 170.48 99615000 0 0 0 4424000 4844900 10411000 7564500 5690000 6196500 8918000 10031000 7507900 6302100 8555900 19169000 39840 3897 35579 332382;332383;332384;332385;332386;332387;332388;332389;332390;332391;332392;332393;332394 263448;263449;263450;263451;263452;263453;263454;263455;263456 263448 9 PGTAPSKPPLTK Unmodified 1192.6816 0.68157298 4393 Q9H4A3 WNK1 Serine/threonine-protein kinase WNK1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 2 2 1 1 21.897 22.175 3 0.00051641 23177 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 105.13 91.124 699580000 0 0 0 0 27867000 62962000 60932000 64859000 57254000 66210000 70602000 84623000 79364000 55685000 69220000 39841 4393 35580 332395;332396;332397;332398;332399;332400;332401;332402;332403;332404;332405;332406;332407 263457;263458;263459;263460;263461;263462;263463;263464;263465;263466;263467 263457 2 PGTAPTSLVSAWNSSSSSK Unmodified 1862.901 0.90102082 3149 Q86UK7 ZNF598 Zinc finger protein 598 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.47 2 1 14 1 2 2 1 1 1 2 2 1 1 1 73.854 73.3 2;3 2.1293E-53 84639 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 191.06 152.28 256260000 10785000 0 0 22959000 24931000 15455000 13571000 13680000 28598000 39609000 0 30257000 0 13217000 43201000 39842 3149 35581 332408;332409;332410;332411;332412;332413;332414;332415;332416;332417;332418;332419;332420;332421;332422 263468;263469;263470;263471;263472;263473;263474;263475;263476;263477;263478;263479;263480;263481;263482;263483;263484 263481 16 PGTEQYLLAK Unmodified 1118.5972 0.59717465 5252 Q9Y5X1 SNX9 Sorting nexin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 49.703 49.118 2 0.0034159 54363 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.572 43.76 200110000 0 136120000 0 0 6524800 0 7220000 7200300 0 8322300 0 0 10364000 7470100 16883000 39843 5252 35582 332423;332424;332425;332426;332427;332428;332429;332430;332431 263485;263486;263487;263488;263489;263490;263491;263492 263490 8 PGTEVIPAAPR Unmodified 1106.6084 0.60840804 3781 Q96CP2 FLYWCH2 FLYWCH family member 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.649 46.815 2 1.5394E-20 52272 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 164.96 140.93 2022300000 0 0 0 108680000 100850000 191940000 119260000 115860000 136170000 187470000 221630000 225060000 212600000 147960000 254840000 39844 3781 35583 332432;332433;332434;332435;332436;332437;332438;332439;332440;332441;332442;332443 263493;263494;263495;263496;263497;263498;263499;263500;263501;263502;263503;263504;263505;263506;263507 263498 15 PGTEVIPAAPRK Unmodified 1234.7034 0.70337105 3781 Q96CP2 FLYWCH2 FLYWCH family member 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 1 2 1 2 2 2 1 2 2 2 34.666 34.816 2;3 7.657E-06 37611 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 72.922 60.502 503330000 0 0 0 23346000 12330000 135980000 1480200 18037000 91560000 46396000 61610000 0 64928000 38675000 8982900 39845 3781 35584 332444;332445;332446;332447;332448;332449;332450;332451;332452;332453;332454;332455;332456;332457;332458;332459;332460;332461 263508;263509;263510;263511;263512;263513;263514;263515;263516;263517;263518;263519 263513 11 PGTGEPVLSLHYSTEGTTTSTIK Unmodified 2375.1856 0.1856351 2718 Q58WW2 DCAF6 DDB1- and CUL4-associated factor 6 yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 75.036 71.834 3 0.0068976 87582 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 27.035 19.231 9772600 0 3124600 6648000 0 0 0 0 0 0 0 0 0 0 0 0 39846 2718 35585 332462;332463 263520;263521 263521 2 PGTMSPESFLEEAQIMK Unmodified 1893.8852 0.8852361 817 P06241 FYN Tyrosine-protein kinase Fyn yes yes 0 0 0 By MS/MS 2 0 1 1 96.756 91.935 2 1.3439E-18 113954 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.03 103.12 13793000 0 13793000 0 0 0 0 0 0 0 0 0 0 0 0 0 39847 817 35586 332464 263522 263522 1 PGTPPIAGR Unmodified 864.48175 0.48175096 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 24.736 25.087 2 0.0030679 25910 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 91.9 66.006 150370000 0 0 0 0 0 24187000 0 0 16495000 24300000 14650000 15592000 16823000 13364000 24963000 39848 5216 35587 332465;332466;332467;332468;332469;332470;332471;332472 263523;263524;263525;263526;263527;263528;263529;263530;263531 263531 7 PGTSGSWQEAGTSAK Unmodified 1462.6688 0.66883604 2763 Q5SXM2 SNAPC4 snRNA-activating protein complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 28.274 28.484 2 0.00038923 29869 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.827 44.523 54237000 0 0 0 0 3645100 6684200 0 3946800 3904000 6902300 8777300 0 8781800 4754800 6840800 39849 2763 35588 332473;332474;332475;332476;332477;332478;332479;332480;332481 263532 263532 1 PGTTGSGAGSGGPGGLTSAAPAGGDK Unmodified 2083.977 0.97703931 1955 P67809 YBX1 Nuclease-sensitive element-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.79 2.98 2 2 24 1 3 2 2 2 2 2 2 2 2 2 2 2 2 44.273 44.284 2;3 4.3277E-276 42623 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 302.26 291.32 4791400000 39480000 53965000 0 209480000 237530000 495360000 207180000 177100000 304100000 431270000 508200000 577660000 516890000 451410000 581740000 39850 1955 35589 332482;332483;332484;332485;332486;332487;332488;332489;332490;332491;332492;332493;332494;332495;332496;332497;332498;332499;332500;332501;332502;332503;332504;332505;332506;332507;332508;332509 263533;263534;263535;263536;263537;263538;263539;263540;263541;263542;263543;263544;263545;263546;263547;263548;263549;263550;263551;263552;263553 263540 21 PGTTGSGAGSGGPGGLTSAAPAGGDKK Unmodified 2212.072 0.072002329 1955 P67809 YBX1 Nuclease-sensitive element-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 33.036 32.707 3 2.0073E-114 35240 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 151 151 455580000 5754700 0 0 23248000 32466000 12398000 30180000 30381000 14828000 36483000 50795000 76888000 44737000 45704000 51713000 39851 1955 35590 332510;332511;332512;332513;332514;332515;332516;332517;332518;332519;332520;332521;332522 263554;263555;263556;263557;263558;263559;263560;263561;263562;263563;263564;263565;263566;263567;263568;263569 263566 16 PGTTLPQPPPATCPPGALQAPEAPASR Unmodified 2678.3486 0.34863488 3149 Q86UK7 ZNF598 Zinc finger protein 598 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.023 76.08 3 0.00077685 87693 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 26.13 19.772 144270000 0 0 0 9108400 8625800 10612000 11808000 10618000 8619000 10849000 15609000 17875000 12101000 11390000 17055000 39852 3149 35591 332523;332524;332525;332526;332527;332528;332529;332530;332531;332532;332533;332534 263570 263570 1 PGTTTIIK Unmodified 829.49092 0.49091866 1663 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 26.442 26.74 2 0.0048958 28249 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 108.92 49.943 245870000 0 0 0 0 0 31606000 18913000 23611000 18685000 22581000 28384000 32824000 19292000 23401000 26575000 39853 1663 35592 332535;332536;332537;332538;332539;332540;332541;332542;332543;332544 263571;263572;263573;263574;263575;263576;263577;263578 263577 2 PGTVAIPAIGAQYSMFPAAPAPK Oxidation (M) 2270.1769 0.17692509 2 A0AV96 RBM47 RNA-binding protein 47 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 86.172 86.308 3 1.5422E-10 99522 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 66.045 62.063 42395000 0 0 0 0 0 11266000 0 0 9531100 12059000 9539000 0 0 0 0 39854 2 35593 332545;332546;332547;332548 263579;263580;263581;263582 263581 1 4 PGTVAIPAIGAQYSMFPAAPAPK Unmodified 2254.182 0.18201047 2 A0AV96 RBM47 RNA-binding protein 47 yes yes 0 0 0 By MS/MS 10 0 1 1 90.799 90.938 3 5.1467E-07 105396 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.541 49.303 4868000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4868000 39855 2 35593 332549 263583;263584 263584 2 PGTYVIYVR Unmodified 1066.5811 0.58113065 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.927 61.03 2 0.0051781 69555 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 81.191 73.035 115930000 0 0 0 8915800 3288400 7342400 5243500 13148000 4017000 9362200 13134000 13825000 7367200 8403100 21885000 39856 487 35594 332550;332551;332552;332553;332554;332555;332556;332557;332558;332559;332560;332561 263585;263586;263587;263588;263589;263590;263591;263592;263593;263594 263590 9 PGVAAPPEVAPAPK Unmodified 1299.7187 0.71868677 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 50.239 49.756 2 2.8869E-14 55163 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 116.77 97.523 807510000 4929000 0 0 46442000 52474000 53641000 55962000 46970000 62552000 63868000 77685000 89442000 68987000 68008000 116550000 39857 5216 35595 332562;332563;332564;332565;332566;332567;332568;332569;332570;332571;332572;332573;332574 263595;263596;263597;263598;263599;263600;263601;263602;263603;263604;263605;263606;263607 263598 12 PGVDEEPQHVLLR Unmodified 1487.7732 0.77324153 3683 Q92900 UPF1 Regulator of nonsense transcripts 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 53.004 53.304 3 1.0276E-11 59135 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 101.38 93.925 126230000 0 0 0 0 0 0 15982000 0 16855000 0 27565000 0 14517000 16853000 34461000 39858 3683 35596 332575;332576;332577;332578;332579;332580;332581 263608;263609;263610;263611;263612;263613;263614;263615;263616 263610 8 PGVESMRK Unmodified 902.46439 0.46438634 5094 Q9Y2A7 NCKAP1 Nck-associated protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 14.013 10.018 2 0.015526 15244 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 120.49 65.702 42205000 42205000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39859 5094 35597 332582 263617 263617 0 PGVFDLINK Unmodified 1001.5546 0.55458155 511 O75521 ECI2 Enoyl-CoA delta isomerase 2, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80.842 79.973 2 0.001064 101385 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 130.22 106.7 215090000 38088000 20953000 0 6684700 7575000 15476000 11232000 10845000 10925000 14186000 12340000 14033000 12944000 11561000 28249000 39860 511 35598 332583;332584;332585;332586;332587;332588;332589;332590;332591;332592;332593;332594;332595;332596 263618;263619;263620;263621;263622;263623;263624;263625;263626;263627;263628;263629;263630 263623 13 PGVGAGHGGDPK Unmodified 1047.5098 0.50975662 4299 Q9GZP8 IMUP Immortalization up-regulated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 6.9 3.81 3 1 6 1 2 1 1 1 1 1 1 1 6.8208 5.5512 2 4.4255E-15 6286 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 147.4 116.9 739610000 230660000 300910000 189970000 0 0 0 0 3602000 4701900 0 5114700 1883300 2752800 0 0 39861 4299 35599 332597;332598;332599;332600;332601;332602;332603;332604;332605;332606 263631;263632;263633;263634;263635;263636;263637;263638;263639 263638 9 PGVGFFFK Unmodified 897.47487 0.47487467 2778 Q5T5Y3 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 80.464 80.485 2 0.015737 93091 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 68.398 52.291 16627000 0 0 0 974870 637410 2605300 1056000 0 2127100 1750100 0 0 1351800 1758000 4366600 39862 2778 35600 332607;332608;332609;332610;332611;332612;332613;332614;332615 263640 263640 1 PGVIPSESNGLSR Unmodified 1311.6783 0.67827852 584 O94782 USP1 Ubiquitin carboxyl-terminal hydrolase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 48.207 48.409 2 0.0060294 53613 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 46.001 25.481 34040000 0 0 0 0 0 0 6837900 4852700 2942600 5934000 7406900 0 0 6066000 0 39863 584 35601 332616;332617;332618;332619;332620;332621 263641 263641 1 PGVIPSESNGLSRGSPSK Unmodified 1767.9115 0.91152593 584 O94782 USP1 Ubiquitin carboxyl-terminal hydrolase 1 yes yes 0 0 1 By MS/MS 2 0 1 1 49.762 41.883 3 5.2304E-06 57940 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.609 72.225 27137000 27137000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39864 584 35602 332622 263642;263643 263642 2 PGVPMEIVLNK Unmodified 1195.6635 0.66348007 5206 Q9Y4L1 HYOU1 Hypoxia up-regulated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 79.228 78.106 2 3.1419E-09 99071 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 169.44 158.75 1893700000 646590000 888870000 169510000 7756000 6415600 20602000 7099600 7181700 8154300 16728000 20147000 20517000 10133000 18097000 45905000 39865 5206 35603 332623;332624;332625;332626;332627;332628;332629;332630;332631;332632;332633;332634;332635;332636;332637;332638 263644;263645;263646;263647;263648;263649;263650;263651;263652;263653;263654;263655;263656;263657;263658;263659;263660 263650 17 PGVPMEIVLNK Oxidation (M) 1211.6584 0.6583947 5206 Q9Y4L1 HYOU1 Hypoxia up-regulated protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 5.4 3.77 6 3 6 3 4 2 1 1 1 1 1 1 65.191 61.957 2 2.0767E-11 77027 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 153.24 125.99 598930000 144800000 267490000 145810000 0 0 0 0 0 3011500 5386800 7585800 8460400 0 5431800 10954000 39866 5206 35603 332639;332640;332641;332642;332643;332644;332645;332646;332647;332648;332649;332650;332651;332652;332653 263661;263662;263663;263664;263665;263666;263667;263668;263669;263670;263671;263672 263671 6607 12 PGVSGQLPK Unmodified 881.49707 0.49706667 4997 Q9ULJ3 ZBTB21 Zinc finger and BTB domain-containing protein 21 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 29.663 29.747 2 0.043067 32368 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 43.769 30.781 4972300 0 0 0 0 0 3191500 0 1780800 0 0 0 0 0 0 0 39867 4997 35604 332654;332655 263673 263673 1 PGVTFTSAK Unmodified 906.48108 0.48108226 4287 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching By MS/MS 8 3.46 3 9 1 2 1 1 1 1 1 1 1 1 1 33.011 32.265 2 0.0058175 44064 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 106.94 76.755 247420000 73078000 116130000 0 0 2968200 7688600 0 0 3704700 7038900 6836000 4795800 7029700 6140100 12007000 39868 4287 35605 332656;332657;332658;332659;332660;332661;332662;332663;332664;332665;332666;332667 263674;263675;263676;263677 263677 4 PGYLANDR Unmodified 904.44028 0.44028008 1345 P35241 RDX Radixin yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 20.958 21.45 2 0.0073952 21200 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 124.83 109.4 90608000 0 0 0 0 0 0 0 0 0 0 20471000 16266000 5976100 10423000 37472000 39869 1345 35606 332668;332669;332670;332671;332672 263678;263679;263680 263678 3 PHASLPPLPLYDQPPSSPYPSPDK Unmodified 2599.2959 0.29585425 595 O94868 FCHSD2 F-BAR and double SH3 domains protein 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 87.3 82.019 3 3.0755E-05 105016 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.064 49.936 10908000 9256600 0 1650900 0 0 0 0 0 0 0 0 0 0 0 0 39870 595 35607 332673;332674 263681;263682;263683 263682 3 PHAVSEGLLGK Unmodified 1106.6084 0.60840804 5230 Q9Y5B8 NME7 Nucleoside diphosphate kinase 7 yes yes 0 0 0 By MS/MS 2 0 1 1 44.285 37.42 2 0.0095127 51435 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.081 36.914 11687000 11687000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39871 5230 35608 332675 263684 263684 1 PHGTMEYTAGNQDTLNSIALK Unmodified 2260.0794 0.079395893 3463 Q8NI08 NCOA7 Nuclear receptor coactivator 7 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 74.244 68.636 3 1.9263E-24 89542 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.281 89.572 17594000 12499000 0 5095200 0 0 0 0 0 0 0 0 0 0 0 0 39872 3463 35609 332676;332677 263685;263686 263685 2 PHGTMEYTAGNQDTLNSIALK Oxidation (M) 2276.0743 0.074310515 3463 Q8NI08 NCOA7 Nuclear receptor coactivator 7 yes yes 0 1 0 By matching By MS/MS 2 0 2 1 1 68.255 62.236 3 8.3894E-07 77324 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 67.928 63.49 17283000 7902800 0 9380500 0 0 0 0 0 0 0 0 0 0 0 0 39873 3463 35609 332678;332679 263687 263687 4993 1 PHIDNDVK Unmodified 936.46649 0.46649483 4828 Q9P2T1 GMPR2 GMP reductase 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 12.129 9.3493 2 0.02976 12536 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.478 55.178 186400000 0 88770000 97630000 0 0 0 0 0 0 0 0 0 0 0 0 39874 4828 35610 332680;332681 263688 263688 1 PHIDSVWPFEK Unmodified 1353.6717 0.67173657 4019 Q99536 VAT1 Synaptic vesicle membrane protein VAT-1 homolog yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 77.088 77.304 3 0.034655 88787 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 34.501 29.814 16941000 0 0 0 0 0 0 0 1757600 2795200 0 0 0 0 0 12388000 39875 4019 35611 332682;332683;332684 263689 263689 1 PHINGPFTPDLAHPVAEVGK Unmodified 2095.0851 0.085073619 4061 Q99798 ACO2 Aconitate hydratase, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 80.479 72.348 4 1.9989E-08 94870 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.031 68.43 35651000 35651000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39876 4061 35612 332685 263690 263690 1 PHLENVVLCR Unmodified 1235.6445 0.64447597 379 O43913 ORC5 Origin recognition complex subunit 5 yes yes 0 0 0 By MS/MS 10 0 1 1 50.487 50.651 3 0.012484 57319 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 47.706 33.742 6325100 0 0 0 0 0 0 0 6325100 0 0 0 0 0 0 0 39877 379 35613 332686 263691 263691 1 PHLHETEEQPYFR Unmodified 1681.7849 0.78486885 5098 Q9Y2D9 ZNF652 Zinc finger protein 652 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 2 1 2 2 1 1 38.832 39.27 3;4 0.00013807 43715 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 83.182 72.077 54072000 0 0 0 0 0 0 0 0 8812000 0 6363100 14244000 11519000 4725400 8408800 39878 5098 35614 332687;332688;332689;332690;332691;332692;332693;332694;332695 263692;263693;263694 263693 3 PHLMSQELPEDWDK Oxidation (M) 1739.7825 0.78248559 838 P07237 P4HB Protein disulfide-isomerase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 5 1 2 2 65.079 59.548 2;3 2.1182E-23 79113 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 127.37 103.39 219030000 14038000 191770000 13227000 0 0 0 0 0 0 0 0 0 0 0 0 39879 838 35615 332696;332697;332698;332699;332700 263695;263696;263697;263698 263697 1026 3 PHLMSQELPEDWDK Unmodified 1723.7876 0.78757097 838 P07237 P4HB Protein disulfide-isomerase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 5.4 3.77 4 2 4 2 3 1 1 1 2 72.839 70.133 2;3 2.3137E-34 89655 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 190.85 180.24 595950000 212270000 304070000 37301000 0 0 0 0 0 0 0 2855700 0 0 2617200 36833000 39880 838 35615 332701;332702;332703;332704;332705;332706;332707;332708;332709;332710 263699;263700;263701;263702;263703;263704;263705;263706;263707;263708;263709 263701 11 PHMESYNAGVK Unmodified 1231.5656 0.56555694 3229 Q8IVL5 LEPREL1 Prolyl 3-hydroxylase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 27.329 23.052 3 0.0027943 32401 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.785 30.727 97875000 54012000 19914000 23949000 0 0 0 0 0 0 0 0 0 0 0 0 39881 3229 35616 332711;332712;332713 263710;263711 263710 2 PHMESYNAGVK Oxidation (M) 1247.5605 0.56047157 3229 Q8IVL5 LEPREL1 Prolyl 3-hydroxylase 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 6 2 2 2 15.16 11.907 2;3 0.0021926 15190 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 67.334 45.341 84740000 30150000 24427000 30163000 0 0 0 0 0 0 0 0 0 0 0 0 39882 3229 35616 332714;332715;332716;332717;332718;332719 263712;263713 263712 4847 2 PHNVMIDHQQK Unmodified 1345.6561 0.65610329 1094 P19784 CSNK2A2 Casein kinase II subunit alpha' yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 16.552 13.228 3 0.00080669 19051 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.507 68.37 82153000 69419000 7149300 5584300 0 0 0 0 0 0 0 0 0 0 0 0 39883 1094 35617 332720;332721;332722 263714 263714 1 PHQQEMEVEQPCIQEVK Unmodified 2107.9667 0.96667432 621 O95104 SCAF4 Splicing factor, arginine/serine-rich 15 yes yes 0 0 0 By MS/MS By MS/MS By matching 7.67 3.3 1 2 1 1 1 54.507 52.782 3 0.0051516 60220 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 48.477 44.873 20585000 0 2744300 0 0 7131000 0 0 0 0 0 0 0 0 10709000 0 39884 621 35618 332723;332724;332725 263715;263716 263716 1 PHSSFKPDNHVR Unmodified 1419.7007 0.70074529 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 10.879 11.22 3 0.030272 9410 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.782 22.857 9963800 0 0 0 0 0 0 0 0 0 0 0 4216000 0 0 5747800 39885 5216 35619 332726;332727 263717 263717 1 PHSVPSHTLPSHPVTPSSK Unmodified 1991.0225 0.022473362 2379 Q14155 ARHGEF7 Rho guanine nucleotide exchange factor 7 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 32.98 31.914 3;4 1.847E-05 45997 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.288 49.386 378390000 171670000 26842000 0 6517500 9308500 22852000 9925600 10956000 13799000 17776000 14653000 21929000 17814000 9483900 24865000 39886 2379 35620 332728;332729;332730;332731;332732;332733;332734;332735;332736;332737;332738;332739;332740;332741;332742 263718;263719;263720;263721;263722;263723;263724 263724 7 PHSVSLNDTETRK Unmodified 1482.7427 0.74266969 4794 Q9P0L0 VAPA Vesicle-associated membrane protein-associated protein A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.93 2.72 2 13 1 1 1 1 1 1 2 1 1 1 1 1 1 1 16.992 16.635 3 2.7821E-13 15333 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 132.79 119.65 370370000 146260000 0 4785500 9836200 8019200 12948000 11109000 18885000 8461900 16843000 20566000 36037000 30449000 18465000 27699000 39887 4794 35621 332743;332744;332745;332746;332747;332748;332749;332750;332751;332752;332753;332754;332755;332756;332757 263725;263726;263727;263728;263729;263730;263731;263732;263733;263734;263735;263736;263737;263738 263732 10 PHSVSSAGSSYK Unmodified 1205.5677 0.56766543 4551 Q9NPG3 UBN1 Ubinuclein-1 yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 11.432 8.3342 2 0.0061945 12932 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.349 56.68 4954300 3979700 0 974530 0 0 0 0 0 0 0 0 0 0 0 0 39888 4551 35622 332758;332759 263739 263739 1 PHSYPALSAEQK Unmodified 1326.6568 0.65681479 897 P09972 ALDOC Fructose-bisphosphate aldolase C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 2 2 2 34.747 29.952 2;3 4.8141E-38 41908 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 252.16 218.07 570980000 375300000 77658000 118020000 0 0 0 0 0 0 0 0 0 0 0 0 39889 897 35623 332760;332761;332762;332763;332764;332765 263740;263741;263742;263743;263744;263745;263746 263744 4 PHTVPCK Unmodified 837.41671 0.41670786 1027 P15880 RPS2 40S ribosomal protein S2 yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 6.8022 4.0142 2 0.016439 6026 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 118.01 94.215 336350000 0 12021000 324330000 0 0 0 0 0 0 0 0 0 0 0 0 39890 1027 35624 332766;332767 263747;263748 263748 2 PHVAYFVPMSK Oxidation (M) 1290.6431 0.64307898 1740 P54577 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed yes yes 0 1 0 By MS/MS By matching 2 0 2 1 1 56.906 50.844 2 0.0012245 69556 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.08 74.406 7916900 6325800 0 1591100 0 0 0 0 0 0 0 0 0 0 0 0 39891 1740 35625 332768;332769 263749 263749 2825 1 PHVAYFVPMSK Unmodified 1274.6482 0.64816436 1740 P54577 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 70.018 64.049 3 0.0010778 85961 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.056 57.101 38102000 34680000 0 3422200 0 0 0 0 0 0 0 0 0 0 0 0 39892 1740 35625 332770;332771 263750;263751 263750 2 PHVNVGTIGHVDHGK Unmodified 1565.8063 0.806273 1572 P49411 TUFM Elongation factor Tu, mitochondrial yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 28.51 29.007 4 0.002349 30679 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 43.592 35.058 105240000 0 0 0 0 0 0 0 0 6937600 0 21289000 32020000 0 0 44998000 39893 1572 35626 332772;332773;332774;332775 263752;263753 263753 2 PIAAVMNTWTK Unmodified 1230.6431 0.64307898 1771 P55786 NPEPPS Puromycin-sensitive aminopeptidase yes yes 0 0 0 By MS/MS 2 0 1 1 79.058 70.928 2 0.019634 93249 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.726 47.939 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39894 1771 35627 332776 263754 263754 1 PIAEAPSAFTLGSEMK Oxidation (M) 1663.8127 0.81272309 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 8.25 3.03 1 3 1 1 1 1 73.507 72.702 2 2.3179E-06 83869 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 81.92 67.044 19518000 0 2497200 0 0 0 8000500 0 3506100 5514600 0 0 0 0 0 0 39895 1601 35628 332777;332778;332779;332780 263755;263756;263757;263758 263755 2582 4 PIAEAPSAFTLGSEMK Unmodified 1647.8178 0.81780846 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 0 By MS/MS By matching By MS/MS 6 4 2 2 2 1 1 81.647 79.392 2;3 3.7617E-58 98519 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 174.9 147.57 148710000 0 131640000 0 0 0 0 0 0 0 0 0 6320000 0 0 10751000 39896 1601 35628 332781;332782;332783;332784 263759;263760;263761 263759 2 PIDNPPHPGSTK Unmodified 1258.6306 0.63060004 4425 Q9H6T3 RPAP3 RNA polymerase II-associated protein 3 yes yes 0 0 0 By matching By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 22.27 18.367 3 0.025892 24729 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 50.467 13.62 47207000 8492000 31596000 7118600 0 0 0 0 0 0 0 0 0 0 0 0 39897 4425 35629 332785;332786;332787;332788 263762;263763 263762 1 PIDYTVLDDVGHGVK Unmodified 1626.8253 0.82533668 3297 Q8IZP0 ABI1 Abl interactor 1 yes yes 0 0 0 By MS/MS 2 0 1 1 78.765 76.137 3 0.021884 92508 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 32.523 19.11 3073200 0 0 3073200 0 0 0 0 0 0 0 0 0 0 0 0 39898 3297 35630 332789 263764 263764 1 PIDYYTETK Unmodified 1128.5339 0.53390569 2569 Q15738 NSDHL Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 37.153 36.952 2 0.0032431 40677 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 129.72 119.25 197280000 0 22038000 0 0 13459000 24073000 9118300 11544000 17926000 16919000 19899000 16041000 18386000 12103000 15777000 39899 2569 35631 332790;332791;332792;332793;332794;332795;332796;332797;332798;332799;332800;332801 263765;263766;263767;263768;263769;263770;263771;263772;263773;263774;263775;263776;263777 263771 11 PIEDPANDTVDFPK Unmodified 1556.7359 0.73585297 426 O60716 CTNND1 Catenin delta-1 yes yes 0 0 0 By MS/MS 2 0 1 1 71.699 65.972 2 7.341E-06 83737 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.1 94.63 11686000 0 11686000 0 0 0 0 0 0 0 0 0 0 0 0 0 39900 426 35632 332802 263778 263778 1 PIEEIIVQNGK Unmodified 1238.6871 0.68705229 1620 P50395 GDI2 Rab GDP dissociation inhibitor beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.25 3.34 2 1 1 2 1 1 61.22 57.762 2 9.8678E-06 64892 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 138.98 92.513 66017000 0 50483000 2901300 0 0 0 0 0 0 0 0 0 0 0 12633000 39901 1620 35633 332803;332804;332805;332806 263779;263780;263781 263780 3 PIELDGLPSDQFAK Unmodified 1528.7773 0.77732386 2649 Q2KHR3 QSER1 Glutamine and serine-rich protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 79.788 79.93 2 0.00039549 92224 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 72.2 44.871 47898000 0 0 0 0 0 5033300 3794600 4007900 4104500 4683600 6136100 5130900 3328700 3640300 8038600 39902 2649 35634 332807;332808;332809;332810;332811;332812;332813;332814;332815;332816 263782;263783;263784;263785;263786;263787;263788;263789;263790;263791 263783 10 PIELPVK Unmodified 794.49019 0.49019038 2004 P82979 SARNP SAP domain-containing ribonucleoprotein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 57.442 57.619 2 0.024152 65151 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 83.377 51.26 144900000 0 0 0 7925500 0 15215000 7412000 5463100 14524000 7715300 12133000 16581000 9052000 18775000 30106000 39903 2004 35635 332817;332818;332819;332820;332821;332822;332823;332824;332825;332826;332827 263792;263793;263794;263795;263796;263797 263795 6 PIELTPLPLLK Unmodified 1232.7744 0.77441073 2610 Q16537 PPP2R5E Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 91.907 92.043 2 4.1933E-05 106664 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 116.52 112.32 9591400 0 0 0 0 0 2021100 520300 0 1031700 1404100 939780 0 0 965810 2708600 39904 2610 35636 332828;332829;332830;332831;332832;332833;332834;332835 263798;263799;263800;263801;263802;263803;263804;263805 263801 8 PIEPLHNLSLTEK Unmodified 1489.814 0.81404372 4997 Q9ULJ3 ZBTB21 Zinc finger and BTB domain-containing protein 21 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 68.469 67.919 3 1.8852E-06 91217 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.46 75.451 204850000 16028000 0 0 9170000 8850400 21911000 10524000 8348700 15153000 13884000 17456000 16951000 19688000 20968000 25918000 39905 4997 35637 332836;332837;332838;332839;332840;332841;332842;332843;332844;332845;332846;332847;332848 263806;263807;263808;263809;263810;263811;263812;263813;263814;263815;263816;263817;263818;263819;263820 263812 15 PIEVQVGGR Unmodified 953.52943 0.52942943 3041 Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.617 38.797 2 0.0033124 41926 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.429 37.418 349660000 0 0 0 10792000 13548000 33118000 17563000 14210000 18520000 32644000 43524000 58499000 31847000 25203000 50195000 39906 3041 35638 332849;332850;332851;332852;332853;332854;332855;332856;332857;332858;332859;332860 263821;263822;263823;263824;263825;263826;263827;263828;263829;263830;263831 263824 10 PIFGIPLADAVER Unmodified 1396.7715 0.77145062 2516 Q15311 RALBP1 RalA-binding protein 1 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 90.552 90.642 2 0.034206 105087 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.77 30.417 1978100 0 0 0 0 0 714000 0 0 0 0 0 0 0 0 1264100 39907 2516 35639 332861;332862 263832 263832 1 PIFLNTIDPSHPMAK Unmodified 1679.8705 0.87051274 1578 P49588 AARS Alanine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.33 3.77 4 8 2 1 1 1 1 1 1 1 1 1 1 79.474 77.609 2;3 1.6641E-35 89163 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 124.45 118.28 348840000 166630000 46840000 5026000 0 0 10590000 0 0 3272200 9789400 8540000 11749000 4415900 12001000 69987000 39908 1578 35640 332863;332864;332865;332866;332867;332868;332869;332870;332871;332872;332873;332874 263833;263834;263835;263836;263837;263838;263839;263840;263841;263842;263843;263844 263836 11 PIFLNTIDPSHPMAK Oxidation (M) 1695.8654 0.86542736 1578 P49588 AARS Alanine--tRNA ligase, cytoplasmic yes yes 0 1 0 By MS/MS By MS/MS 6 4 1 1 1 1 76.379 72.368 3 0.0012791 94841 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.875 64.637 269710000 255830000 0 0 0 0 0 0 0 0 0 0 0 13877000 0 0 39909 1578 35640 332875;332876 263845;263846 263845 2539 0 PIGAGEEK Unmodified 799.40758 0.40758296 1209 P26639 TARS Threonine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 4.29 3.65 1 3 1 2 2 2 1 1 1 22.541 21.569 2 0.0029524 7535 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 150.84 79.924 6449300000 338790000 6024200000 70197000 0 0 0 0 0 0 0 0 2851300 0 0 13236000 39910 1209 35641 332877;332878;332879;332880;332881;332882;332883 263847;263848;263849;263850;263851;263852 263850 4 PIGALNPK Unmodified 808.48069 0.48068833 1638 P50851 LRBA Lipopolysaccharide-responsive and beige-like anchor protein no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31.079 30.265 2 0.0025165 41853 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 122.15 77.623 474500000 137830000 113520000 77363000 10276000 7887100 17946000 9560700 9383800 8694100 15105000 11114000 16685000 12683000 12889000 13567000 39911 1638 35642 332884;332885;332886;332887;332888;332889;332890;332891;332892;332893;332894;332895;332896;332897;332898 263853;263854 263853 2 PIGDPVFAR Unmodified 970.52362 0.52361577 28 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 55.076 55.204 2 0.031671 62350 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 47.657 25.886 54182000 0 0 0 3461800 0 10726000 3761000 3310400 7209700 5866200 10517000 9330100 0 0 0 39912 28 35643 332899;332900;332901;332902;332903;332904;332905;332906 263855;263856;263857;263858 263857 4 PIGFEGDLR Unmodified 1002.5134 0.51344502 4464 Q9H981 ACTR8 Actin-related protein 8 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 59.351 59.521 2 0.033064 67438 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 47.082 16.915 4970100 0 0 0 0 0 0 0 1873200 3096900 0 0 0 0 0 0 39913 4464 35644 332907;332908 263859 263859 1 PIGNTFSTVSGK Unmodified 1206.6245 0.62445203 2730 Q5HYK7 SH3D19 SH3 domain-containing protein 19 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.8 3.92 2 3 1 1 1 1 1 48.317 43.912 2 0.0015173 48765 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.201 41.474 43249000 13458000 21408000 0 0 0 0 0 0 0 0 8383300 0 0 0 0 39914 2730 35645 332909;332910;332911;332912;332913 263860;263861;263862;263863;263864 263862 5 PIGPDDAIDALSSDFTCGSPTAAGK Unmodified 2462.1271 0.12713395 1113 P20810 CAST Calpastatin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.92 3.43 5 2 19 1 4 2 1 2 1 2 2 1 2 2 2 2 2 89.937 88.897 2;3 4.1068E-120 109697 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 157.01 149.11 1728800000 28038000 1539300000 12216000 0 3574400 8461800 3935100 7412200 9599900 11844000 16271000 16683000 4666300 11691000 55160000 39915 1113 35646 332914;332915;332916;332917;332918;332919;332920;332921;332922;332923;332924;332925;332926;332927;332928;332929;332930;332931;332932;332933;332934;332935;332936;332937;332938;332939 263865;263866;263867;263868;263869;263870;263871;263872;263873;263874;263875;263876;263877;263878;263879;263880;263881;263882;263883;263884;263885;263886;263887;263888;263889;263890;263891;263892 263872 28 PIHQGPDAAVTGHIR Unmodified 1567.8219 0.82192306 1720 P53618 COPB1 Coatomer subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 1 2 2 2 2 32.713 32.885 3;4 0.00012026 34684 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.651 70.381 1067900000 0 0 0 33835000 52080000 140990000 74937000 76064000 50892000 108230000 35737000 133190000 97781000 82034000 182100000 39916 1720 35647 332940;332941;332942;332943;332944;332945;332946;332947;332948;332949;332950;332951;332952;332953;332954;332955;332956;332957;332958;332959;332960;332961;332962 263893;263894;263895;263896;263897;263898;263899;263900;263901;263902;263903 263898 5 PIIAAPVFTK Unmodified 1055.6379 0.63791725 3134 Q86TC9 MYPN Myopalladin yes yes 0 0 0 By MS/MS By matching By matching By matching By matching 10 0 5 1 1 1 1 1 76.455 76.479 2 0.021527 88888 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 86.67 63.242 59837000 0 0 0 7732000 0 0 11183000 11450000 14276000 15197000 0 0 0 0 0 39917 3134 35648 332963;332964;332965;332966;332967 263904 263904 0 PIIDLYEEMGK Unmodified 1306.6479 0.64788959 1268 P30085 CMPK1 UMP-CMP kinase yes yes 0 0 0 By MS/MS 10 0 1 1 81.989 82.192 2 0.0025166 94848 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.334 61.987 5561400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5561400 39918 1268 35649 332968 263905 263905 1 PIITSVPK Unmodified 853.5273 0.52730417 902 P0CG13 CHTF8 Chromosome transmission fidelity protein 8 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 45.48 45.701 2 0.021946 50690 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 61.561 18.347 176760000 0 0 0 9808700 0 18272000 12251000 12859000 16585000 20024000 22077000 19654000 0 16571000 28662000 39919 902 35650 332969;332970;332971;332972;332973;332974;332975;332976;332977;332978 263906;263907 263907 2 PILLQGHER Unmodified 1061.5982 0.5981777 2273 Q13347 EIF3I Eukaryotic translation initiation factor 3 subunit I yes yes 0 0 0 By MS/MS 10 0 1 1 30.289 31.001 2 0.043239 33202 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.59 24.71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39920 2273 35651 332979 263908 263908 1 PILNLALK Unmodified 880.57459 0.57458871 2823 Q5VW36 FOCAD Focadhesin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 77.406 76.837 2 0.0044499 88707 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 110.63 59.061 98952000 10190000 0 0 4149300 6597600 11645000 7223500 6160100 6228200 11093000 6917400 9542100 4047400 4519600 10638000 39921 2823 35652 332980;332981;332982;332983;332984;332985;332986;332987;332988;332989;332990;332991;332992 263909;263910;263911;263912;263913;263914;263915;263916;263917;263918;263919;263920;263921 263910 13 PIMFSGGIGSMEADHISK 2 Oxidation (M) 1907.8757 0.87573405 248 O15067 PFAS Phosphoribosylformylglycinamidine synthase yes yes 0 2 0 By MS/MS By MS/MS 2 0 2 1 1 67.546 61.526 3 3.1928E-05 81852 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.802 67.078 86048000 79420000 0 6628500 0 0 0 0 0 0 0 0 0 0 0 0 39922 248 35653 332993;332994 263922 263922 335;336 1 PIMFSGGIGSMEADHISK Unmodified 1875.8859 0.8859048 248 O15067 PFAS Phosphoribosylformylglycinamidine synthase yes yes 0 0 0 By MS/MS 2 0 1 1 83.597 75.466 3 7.051E-08 98575 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.01 85.098 114970000 114970000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39923 248 35653 332995 263923 263923 1 PIMFSGGIGSMEADHISK Oxidation (M) 1891.8808 0.88081943 248 O15067 PFAS Phosphoribosylformylglycinamidine synthase yes yes 0 1 0 By MS/MS 2 0 1 1 78.866 70.736 3 0.00022702 92920 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.597 67.026 98544000 98544000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39924 248 35653 332996 263924 263924 335;336 0 PINPTSQIVTTSQPQQR Unmodified 1893.9908 0.99083888 2893 Q6MZP7 LIN54 Protein lin-54 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 54.543 54.656 3 0.00013128 61347 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.416 56.949 79206000 0 0 0 5885600 6721500 6340300 6040800 6030900 4039800 7856900 13404000 9954900 0 0 12931000 39925 2893 35654 332997;332998;332999;333000;333001;333002;333003;333004;333005;333006 263925;263926;263927;263928 263926 3 PINTSLYLCDNK Unmodified 1436.697 0.69696505 1902 P62495 ETF1 Eukaryotic peptide chain release factor subunit 1 yes yes 0 0 0 By MS/MS 2 0 1 1 68.212 62.313 2 0.00030586 79261 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 146.71 128.45 74004000 0 74004000 0 0 0 0 0 0 0 0 0 0 0 0 0 39926 1902 35655 333007 263929 263929 0 PIPCQPTHFWNDENGNK Unmodified 2052.9112 0.91120835 3159 Q86V21 AACS Acetoacetyl-CoA synthetase yes yes 0 0 0 By MS/MS 2 0 1 1 70.56 62.294 3 0.0023863 82969 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.09 31.455 14639000 14639000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39927 3159 35656 333008 263930 263930 1 PIPGGQTIGPR Unmodified 1091.6087 0.60874239 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.564 41.742 2 0.010119 45375 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 49.85 27.719 133230000 0 0 0 7356200 6468900 11798000 10756000 9382100 8948300 11937000 12835000 13665000 14418000 10622000 15042000 39928 1601 35657 333009;333010;333011;333012;333013;333014;333015;333016;333017;333018;333019;333020 263931;263932 263932 2 PIPIFIER Unmodified 983.5804 0.58040237 4615 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 79.669 79.725 2 0.027721 91720 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.177 25.112 26444000 0 0 0 1361900 0 4885900 0 0 0 3179900 3355100 3776300 2234900 2172100 5477700 39929 4615 35658 333021;333022;333023;333024;333025;333026;333027;333028 263933;263934 263934 2 PIPLFVEK Unmodified 941.5586 0.5586043 2224 Q13017 ARHGAP5 Rho GTPase-activating protein 5 yes yes 0 0 0 By MS/MS 10 0 1 1 75.468 75.46 2 0.031953 87076 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 54.611 26.189 5377900 0 0 0 0 0 5377900 0 0 0 0 0 0 0 0 0 39930 2224 35659 333029 263935 263935 1 PIPQTPESAGNK Unmodified 1237.6303 0.63026569 1707 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 27.326 27.17 2 2.2185E-05 29083 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 105.1 64.072 1290700000 0 41550000 0 64842000 66988000 99322000 97368000 83904000 92115000 113300000 114220000 143670000 106890000 105760000 160720000 39931 1707 35660 333030;333031;333032;333033;333034;333035;333036;333037;333038;333039;333040;333041;333042 263936;263937;263938;263939;263940;263941;263942;263943;263944;263945;263946;263947;263948;263949 263937 14 PIQDVNSLR Unmodified 1040.5615 0.56145784 5193 Q9Y4C1 KDM3A Lysine-specific demethylase 3A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 38.081 38.535 2 0.014237 42738 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 58.596 25.755 19193000 0 0 0 0 0 0 0 0 0 4832500 6429100 0 0 0 7931600 39932 5193 35661 333043;333044;333045 263950;263951;263952 263950 3 PIQEVLIEMTDGGVDYSFECIGNVK Unmodified 2812.3299 0.32993285 955 P11766 ADH5 Alcohol dehydrogenase class-3 yes yes 0 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 2 2 99.195 93.738 3 6.5711E-47 117630 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 118.67 111.56 122460000 109180000 13283000 0 0 0 0 0 0 0 0 0 0 0 0 0 39933 955 35662 333046;333047;333048;333049 263953;263954;263955;263956 263956 4 PIQEVLIEMTDGGVDYSFECIGNVK Oxidation (M) 2828.3248 0.32484748 955 P11766 ADH5 Alcohol dehydrogenase class-3 yes yes 0 1 0 By MS/MS 3 0 1 1 93.072 89.558 3 6.8119E-05 92078 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 49.25 46.422 3696600 3696600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39934 955 35662 333050 263957 263957 1238 1 PIQNQTFSTPASQLFSPHGSNPSTPAATPVPTASPVK Unmodified 3758.8904 0.89040314 3198 Q86XN7 PROSER1 Proline and serine-rich protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 2 2 2 2 2 1 82.833 82.975 3;4 1.0337E-48 96095 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 69.094 64.379 65801000 0 0 0 0 0 10498000 0 9150300 7996300 13774000 8268900 0 0 0 16114000 39935 3198 35663 333051;333052;333053;333054;333055;333056;333057;333058;333059;333060;333061 263958;263959;263960;263961;263962 263959 5 PIRALDEGDIALLK Unmodified 1522.8719 0.87189295 1369 P35998 PSMC2 26S protease regulatory subunit 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 82.998 78.527 3 1.444E-12 99279 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.48 114.79 279010000 174670000 100240000 4109900 0 0 0 0 0 0 0 0 0 0 0 0 39936 1369 35664 333062;333063;333064;333065;333066 263963;263964;263965;263966;263967 263963 4 PIRPGQHPAASPTHPSAIR Unmodified 1989.0657 0.06567558 1328 P33176 KIF5B Kinesin-1 heavy chain yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 2 2 2 2 2 2 2 1 2 2 2 27.256 27.452 4;5 0.00025445 29281 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 48.376 44.714 542380000 0 0 0 15698000 6330900 74707000 33050000 36986000 57672000 32945000 57455000 31240000 80600000 34868000 80827000 39937 1328 35665 333067;333068;333069;333070;333071;333072;333073;333074;333075;333076;333077;333078;333079;333080;333081;333082;333083;333084;333085;333086;333087;333088 263968;263969;263970;263971;263972;263973;263974;263975;263976;263977;263978;263979;263980 263974 10 PISGFITGDQAR Unmodified 1260.6463 0.64625011 2581 Q15811;CON__ENSEMBL:ENSBTAP00000001528 ITSN1 Intersectin-1 yes no 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 57.532 58.133 2 0.0065461 65428 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.434 29.055 + 4846000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4846000 39938 2581 35666 333089;333090 263981;263982 263981 2 PISNQSWDQK Unmodified 1201.5728 0.57275081 2604 Q16513 PKN2 Serine/threonine-protein kinase N2 yes yes 0 0 0 By MS/MS 2 0 1 1 33.838 29.194 2 3.9225E-05 38287 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.81 89.449 60847000 0 60847000 0 0 0 0 0 0 0 0 0 0 0 0 0 39939 2604 35667 333091 263983;263984 263984 2 PISSFADFER Unmodified 1167.556 0.55603811 2449 Q14807 KIF22 Kinesin-like protein KIF22 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.204 70.28 2 0.0063632 80380 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 65.224 56.361 51671000 0 0 0 2031200 2879100 5778400 3247000 3836300 5246400 4389000 4353200 4577200 4812200 4363900 6156700 39940 2449 35668 333092;333093;333094;333095;333096;333097;333098;333099;333100;333101;333102;333103 263985;263986;263987;263988;263989;263990;263991;263992;263993;263994;263995;263996 263989 12 PISSSYVK Unmodified 879.47018 0.47018322 1063 P17858 PFKL ATP-dependent 6-phosphofructokinase, liver type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 25.02 25.26 2 0.0068312 25525 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.874 48.858 102630000 0 0 0 0 5029600 13430000 6337400 5617300 6136700 12333000 7738300 8155200 8173800 11770000 17913000 39941 1063 35669 333104;333105;333106;333107;333108;333109;333110;333111;333112;333113;333114 263997;263998;263999;264000;264001;264002;264003;264004 263999 8 PISTLDNR Unmodified 914.48214 0.48214489 1303 P31689 DNAJA1 DnaJ homolog subfamily A member 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.07 23.275 2 0.00011833 24763 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 155.51 40.727 733320000 0 0 0 33168000 31046000 44427000 35893000 28170000 27855000 56954000 80400000 90359000 84735000 75877000 144430000 39942 1303 35670 333115;333116;333117;333118;333119;333120;333121;333122;333123;333124;333125;333126 264005;264006;264007;264008;264009;264010;264011;264012;264013 264005 7 PISVEGSSK Unmodified 902.47091 0.4709115 4497 Q9HB71 CACYBP Calcyclin-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.28 3.23 3 1 14 1 2 1 1 1 1 1 1 1 1 1 2 1 1 2 15.929 15.314 2 0.00043088 18471 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.31 96.892 5876900000 200050000 4710900000 77047000 17149000 25464000 130130000 57206000 42714000 37715000 78142000 67094000 86696000 60012000 105400000 181200000 39943 4497 35671 333127;333128;333129;333130;333131;333132;333133;333134;333135;333136;333137;333138;333139;333140;333141;333142;333143;333144 264014;264015;264016;264017;264018;264019;264020;264021;264022;264023;264024;264025;264026;264027;264028;264029;264030;264031 264018 17 PISWEELLQ Unmodified 1113.5706 0.57062555 2806 Q5VSL9 STRIP1 Striatin-interacting protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 97.814 93.041 2 0.0066015 115194 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.11 86.075 23104000 0 23104000 0 0 0 0 0 0 0 0 0 0 0 0 0 39944 2806 35672 333145 264032 264032 1 PITFLSLK Unmodified 917.5586 0.5586043 3187 Q86X10 RALGAPB Ral GTPase-activating protein subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 81.022 81.045 2 0.021457 93742 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 61.962 48.187 27696000 0 0 0 2178300 2639800 5495100 1744800 3220800 3490200 3033800 0 0 0 0 5893400 39945 3187 35673 333146;333147;333148;333149;333150;333151;333152;333153 264033 264033 1 PITGGLGAFTK Unmodified 1060.5917 0.59169534 5000 Q9ULM3 YEATS2 YEATS domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 63.964 64.001 2 0.00079378 72932 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 77.192 29.449 101700000 0 0 0 6636900 9239500 12668000 8413000 6090400 8594500 14370000 13489000 16075000 0 6123500 0 39946 5000 35674 333154;333155;333156;333157;333158;333159;333160;333161;333162;333163 264034;264035;264036;264037;264038;264039 264035 5 PITPETAEK Unmodified 984.51278 0.51277632 1821 P60953 CDC42 Cell division control protein 42 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 2 1 1 1 1 1 1 1 1 1 21.466 20.523 2 0.0016964 27291 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 133.86 76.399 1417700000 50929000 891190000 5286100 0 11062000 0 21345000 25650000 35313000 54945000 79301000 68278000 40288000 46777000 87299000 39947 1821 35675 333164;333165;333166;333167;333168;333169;333170;333171;333172;333173;333174;333175;333176;333177;333178;333179 264040;264041;264042;264043;264044;264045;264046;264047;264048;264049;264050;264051;264052;264053;264054 264047 12 PITPVYTVAPNVQR Unmodified 1553.8566 0.85657723 2 A0AV96 RBM47 RNA-binding protein 47 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 68.85 68.929 2;3 0.0003547 78712 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 91.855 83.125 320470000 0 0 0 20655000 13116000 19040000 27106000 23934000 16140000 23955000 41124000 37448000 26157000 26293000 45499000 39948 2 35676 333180;333181;333182;333183;333184;333185;333186;333187;333188;333189;333190;333191;333192;333193;333194;333195;333196;333197;333198;333199;333200;333201;333202;333203 264055;264056;264057;264058;264059;264060;264061;264062;264063;264064;264065;264066;264067;264068;264069;264070;264071;264072 264061 9 PITSEDIK Unmodified 901.47566 0.47566253 861 P08237 PFKM ATP-dependent 6-phosphofructokinase, muscle type yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 25.345 25.591 2 0.0067966 27717 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 96.492 62.941 284670000 0 0 0 0 16718000 53670000 8464200 0 28957000 29966000 18049000 25294000 24821000 29562000 49165000 39949 861 35677 333204;333205;333206;333207;333208;333209;333210;333211;333212;333213 264073;264074;264075;264076;264077;264078;264079;264080;264081 264074 9 PIVKPTAGAGPQETNMK Unmodified 1737.9084 0.90835481 3037 Q76L83 ASXL2 Putative Polycomb group protein ASXL2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 36.267 36.468 3 0.030817 40419 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 32.815 21.71 11058000 0 0 0 0 0 4324700 0 0 2220300 0 4513200 0 0 0 0 39950 3037 35678 333214;333215;333216 264082 264082 0 PIVSASPPSR Unmodified 1009.5556 0.55564418 3823 Q96EV2 RBM33 RNA-binding protein 33 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 33.73 34.036 2 0.0099071 37241 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 78.149 60.909 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39951 3823 35679 333217;333218;333219 264083;264084;264085 264084 3 PIVYGNVAR Unmodified 987.55016 0.55016488 673 O95619 YEATS4 YEATS domain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.963 40.143 2 0.0094557 44850 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.682 31.874 100580000 0 0 0 6761700 5507600 13198000 7176000 6856200 8700400 9863500 9490500 11920000 6694500 6127400 8281100 39952 673 35680 333220;333221;333222;333223;333224;333225;333226;333227;333228;333229;333230;333231 264086;264087;264088;264089;264090;264091;264092;264093;264094;264095;264096 264086 11 PIWTRNPDDITNEEYGEFYK Unmodified 2486.139 0.13901926 850 P07900 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 3.46 6 2 4 1 1 1 1 80.949 77.025 3 1.187E-71 97927 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.56 129.69 1187800000 958570000 170340000 6103800 0 0 6349200 0 0 0 0 0 0 0 0 46455000 39953 850 35681 333232;333233;333234;333235;333236;333237;333238;333239 264097;264098;264099;264100;264101;264102;264103;264104;264105 264098 9 PIWTRNPDDITQEEYGEFYK Unmodified 2500.1547 0.15466933 862 P08238 HSP90AB1 Heat shock protein HSP 90-beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.83 3.67 6 2 4 5 2 1 1 1 1 1 81.127 77.958 3;4 3.3742E-174 90975 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 179.95 177.47 2066900000 1714700000 247440000 9784600 0 0 9758700 0 0 0 7066700 6039200 0 0 0 72069000 39954 862 35682 333240;333241;333242;333243;333244;333245;333246;333247;333248;333249;333250;333251 264106;264107;264108;264109;264110;264111;264112;264113;264114;264115;264116;264117;264118;264119 264111 14 PIYDDDPSLEGGVNGK Unmodified 1674.7737 0.77369504 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 57.486 56.763 2 1.9568E-266 71000 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 285.13 279.03 291600000 0 192970000 0 5893900 5528900 11757000 5992500 0 9151300 7366500 11629000 10800000 8057300 7745200 14709000 39955 1201 35683 333252;333253;333254;333255;333256;333257;333258;333259;333260;333261;333262;333263;333264 264120;264121;264122;264123;264124;264125;264126;264127;264128;264129;264130;264131;264132 264123 12 PKIEDVGSDEEDDSGK Unmodified 1718.7483 0.74826815 862;2716 P08238;Q58FF8 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 no no 0 0 1 By MS/MS 2 0 1 1 29.987 24.367 3 0.0030976 34251 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 38.696 30.52 9950600 9950600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39956 862;2716 35684 333265 264133 264133 1 PKPEEEVKPVK Unmodified 1278.7184 0.71835242 2822 Q5VW32 BROX BRO1 domain-containing protein BROX yes yes 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 19.406 15.802 3 0.014946 19995 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 63.473 52.527 59755000 8059300 0 51695000 0 0 0 0 0 0 0 0 0 0 0 0 39957 2822 35685 333266;333267 264134 264134 0 PKPGDGEFVEVISLPK Unmodified 1710.9192 0.91923707 4970 Q9UKK9 NUDT5 ADP-sugar pyrophosphatase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.11 3.91 1 5 3 9 3 4 2 1 1 2 2 1 2 83.853 82.36 2;3 9.743E-18 98141 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 116.63 95.636 879030000 193670000 256230000 236790000 1901200 1370400 0 0 0 0 0 24191000 29343000 0 18104000 117440000 39958 4970 35686 333268;333269;333270;333271;333272;333273;333274;333275;333276;333277;333278;333279;333280;333281;333282;333283;333284;333285 264135;264136;264137;264138;264139;264140;264141;264142;264143;264144;264145;264146;264147;264148;264149 264146 11 PKPIPYIYGSR Unmodified 1289.7132 0.71320746 947 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 53.118 53.317 3 0.010595 60341 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 44.616 31.608 227240000 0 0 0 13604000 0 17099000 22333000 17964000 32553000 0 40560000 18994000 0 26286000 37847000 39959 947 35687 333286;333287;333288;333289;333290;333291;333292;333293;333294 264150;264151;264152;264153;264154 264151 5 PKPIPYIYGSRGPTEADELMK Unmodified 2361.2039 0.20386813 947 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase yes yes 0 0 2 By MS/MS 2 0 1 1 80.236 72.106 4 0.042379 94627 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 18.172 13.821 9576500 9576500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39960 947 35688 333295 264155 264155 1 PKPRPEDIVNCDLK Unmodified 1679.8665 0.86648999 4665 Q9NVD7 PARVA Alpha-parvin yes yes 0 0 2 By MS/MS 2 0 1 1 55.347 47.239 3 0.0026073 64962 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.037 51.122 51231000 51231000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39961 4665 35689 333296 264156;264157 264157 2 PLAALVTYK Unmodified 974.58007 0.58006802 895 P09884 POLA1 DNA polymerase alpha catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 64.559 64.36 2 0.0077155 72494 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.692 43.585 149160000 0 0 18224000 5747200 6631900 9968900 10856000 8344700 6611100 14749000 12270000 16674000 7249800 10441000 21395000 39962 895 35690 333297;333298;333299;333300;333301;333302;333303;333304;333305;333306;333307;333308;333309 264158;264159;264160;264161;264162;264163;264164;264165;264166;264167;264168 264161 10 PLAAVTCTAPVNIAVIK Unmodified 1736.9859 0.98587685 1717 P53602 MVD Diphosphomevalonate decarboxylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.59 2.96 3 2 22 1 4 2 2 2 2 2 2 2 2 2 2 2 84.164 83.316 2;3 1.514E-29 96645 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 117.86 108.43 328280000 18865000 140500000 0 2755900 8470700 9040800 12516000 18360000 21438000 15902000 22339000 28811000 0 8674700 20606000 39963 1717 35691 333310;333311;333312;333313;333314;333315;333316;333317;333318;333319;333320;333321;333322;333323;333324;333325;333326;333327;333328;333329;333330;333331;333332;333333;333334;333335;333336 264169;264170;264171;264172;264173;264174;264175;264176;264177;264178;264179;264180;264181;264182;264183;264184;264185;264186;264187 264169 16 PLADSEK Unmodified 758.38103 0.38103386 193 O14617 AP3D1 AP-3 complex subunit delta-1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 6.914 3.5349 2 0.039391 5150 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.32 34.554 279620000 7111200 272510000 0 0 0 0 0 0 0 0 0 0 0 0 0 39964 193 35692 333337;333338 264188 264188 1 PLADTMRPDTLQDYFGQSK Unmodified 2182.0365 0.036468446 3983 Q96S55 WRNIP1 ATPase WRNIP1 yes yes 0 0 1 By MS/MS 10 0 1 1 79.544 79.773 3 0.00078477 91839 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.844 30.59 10144000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10144000 39965 3983 35693 333339 264189 264189 1 PLAEGPQVTGPIEVPAAR Unmodified 1800.9734 0.9733979 1706 P52943 CRIP2 Cysteine-rich protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.21 2.31 1 1 17 2 2 2 2 2 1 2 1 1 1 1 1 1 76.39 75.975 2;3 1.2189E-61 87334 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 185.27 167.46 474370000 0 63636000 0 17869000 18155000 19168000 19144000 13406000 13778000 18300000 59356000 58622000 11966000 42034000 118930000 39966 1706 35694 333340;333341;333342;333343;333344;333345;333346;333347;333348;333349;333350;333351;333352;333353;333354;333355;333356;333357;333358 264190;264191;264192;264193;264194;264195;264196;264197;264198;264199;264200;264201;264202;264203;264204;264205;264206;264207 264196 15 PLAEGPQVTGPIEVPAARAEERK Unmodified 2414.2918 0.29177193 1706 P52943 CRIP2 Cysteine-rich protein 2 yes yes 0 0 2 By MS/MS By MS/MS 2.25 0.433 3 1 2 2 71.682 66.599 3;4 8.9942E-13 82237 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 83.453 76.73 248690000 195680000 0 53004000 0 0 0 0 0 0 0 0 0 0 0 0 39967 1706 35695 333359;333360;333361;333362 264208;264209;264210;264211;264212;264213;264214;264215 264215 8 PLAENEEGEK Unmodified 1114.5142 0.51423288 4616 Q9NRY5 FAM114A2 Protein FAM114A2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 11.778 11.424 2 3.9208E-23 10326 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 172.23 151.61 255120000 0 53050000 0 9054100 11406000 15240000 16064000 18741000 17411000 17032000 9951400 21213000 24679000 17798000 23480000 39968 4616 35696 333363;333364;333365;333366;333367;333368;333369;333370;333371;333372;333373;333374;333375;333376 264216;264217;264218;264219;264220;264221;264222;264223;264224;264225;264226;264227;264228;264229 264226 13 PLAEQDWYHGAIPR Unmodified 1651.8107 0.81068967 1040 P16591 FER Tyrosine-protein kinase Fer yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 69.114 69.389 3 0.0072692 79136 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.424 30.859 14319000 0 0 0 0 0 0 0 1660900 1893400 0 0 2975500 0 2482700 5306200 39969 1040 35697 333377;333378;333379;333380;333381 264230 264230 1 PLAGAAGAPGK Unmodified 908.50797 0.50796571 134 O00257 CBX4 E3 SUMO-protein ligase CBX4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19.001 18.401 2 0.0002559 23173 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.22 95.328 239410000 13395000 122120000 2214300 7049100 7352100 8738100 7815900 6194500 5938900 9970000 7168500 11239000 10398000 7276400 12543000 39970 134 35698 333382;333383;333384;333385;333386;333387;333388;333389;333390;333391;333392;333393;333394;333395;333396 264231;264232;264233;264234;264235;264236;264237;264238 264232 3 PLAHHIPVEK Unmodified 1139.6451 0.64512789 1758 P55145 MANF Mesencephalic astrocyte-derived neurotrophic factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.09 3.73 5 2 4 4 2 1 1 1 1 1 28.771 26.235 2;3 0.00069968 39340 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 106.2 91.525 420200000 210440000 66202000 20638000 0 0 0 0 8054000 0 0 0 28766000 0 13838000 72262000 39971 1758 35699 333397;333398;333399;333400;333401;333402;333403;333404;333405;333406;333407 264239;264240;264241;264242;264243;264244;264245;264246;264247;264248;264249;264250;264251;264252 264244 13 PLALPVR Unmodified 764.49086 0.49085908 3422 Q8NEB9 PIK3C3 Phosphatidylinositol 3-kinase catalytic subunit type 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 57.641 57.894 2 0.038665 64569 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.39 43.281 17301000 0 0 0 0 0 7183600 2418800 0 0 0 0 0 0 0 7698200 39972 3422 35700 333408;333409;333410 264253 264253 1 PLALVEEIR Unmodified 1038.6073 0.6073454 4125 Q9BSD7 NTPCR Cancer-related nucleoside-triphosphatase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.175 75.234 2 0.0052332 86691 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 79.474 52.22 68509000 0 0 0 1568000 2709600 10593000 3515800 2589500 7390400 8994300 5805300 8365500 3751600 4634800 8591700 39973 4125 35701 333411;333412;333413;333414;333415;333416;333417;333418;333419;333420;333421;333422 264254;264255;264256;264257;264258;264259;264260;264261;264262;264263 264255 10 PLAQLADPWQK Unmodified 1265.6768 0.67682195 1672 P51812 RPS6KA3 Ribosomal protein S6 kinase alpha-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76.156 75.172 2 1.0302E-12 95815 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 172.88 142.19 512490000 82698000 235710000 28703000 6494000 6895200 16735000 11383000 10213000 8880600 16499000 18744000 18761000 9459000 12238000 29074000 39974 1672 35702 333423;333424;333425;333426;333427;333428;333429;333430;333431;333432;333433;333434;333435;333436;333437 264264;264265;264266;264267;264268;264269;264270;264271;264272;264273;264274;264275;264276;264277;264278 264270 15 PLAQSHATK Unmodified 951.51378 0.51377937 755 P02144 MB Myoglobin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 5.9756 3.0164 2 0.0067978 4941 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.42 53.113 58106000 24105000 18906000 15096000 0 0 0 0 0 0 0 0 0 0 0 0 39975 755 35703 333438;333439;333440 264279;264280 264279 2 PLARDLLHPSLEEEK Unmodified 1745.9312 0.93119874 3032 Q71UM5 RPS27L 40S ribosomal protein S27-like yes yes 0 0 1 By MS/MS 2 0 1 1 74.249 66.118 4 0.017781 87494 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.591 39.074 20368000 20368000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39976 3032 35704 333441 264281 264281 0 PLASAHLTSAAGDTR Unmodified 1466.7478 0.74775506 3615 Q92538 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 2 1 1 1 1 1 1 2 1 33.993 34.129 2;3 0.0015093 36302 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.225 43.872 234270000 0 0 0 15036000 17946000 33699000 16790000 19688000 10971000 33199000 27028000 0 28012000 27180000 4722000 39977 3615 35705 333442;333443;333444;333445;333446;333447;333448;333449;333450;333451;333452;333453;333454 264282;264283;264284;264285;264286;264287 264283 3 PLASTTQYSR Unmodified 1122.5669 0.56693715 4773 Q9NZM1 MYOF Myoferlin yes yes 0 0 0 By matching By MS/MS By matching By matching 10 0 4 1 1 1 1 24.85 24.842 2 0.035524 26763 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 41.448 22.354 11312000 0 0 0 2692800 1833200 0 0 3996900 0 0 0 0 2789300 0 0 39978 4773 35706 333455;333456;333457;333458 264288 264288 1 PLATLEENGETDK Unmodified 1415.678 0.67800374 420 O60658 PDE8A High affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8A yes yes 0 0 0 By MS/MS 2 0 1 1 43.059 37.911 2 0.0026663 49329 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.92 80.78 15844000 0 15844000 0 0 0 0 0 0 0 0 0 0 0 0 0 39979 420 35707 333459 264289 264289 1 PLATTQPAK Unmodified 925.52328 0.52328142 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14.996 14.465 2 0.0012532 17598 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.54 91.551 1059500000 39089000 543250000 9256400 24744000 17660000 38324000 20872000 15737000 30618000 44812000 63601000 57045000 39117000 48423000 66909000 39980 1226 35708 333460;333461;333462;333463;333464;333465;333466;333467;333468;333469;333470;333471;333472;333473;333474 264290;264291;264292;264293;264294;264295;264296;264297;264298;264299 264292 10 PLCDLLTVMDSK Unmodified 1390.6836 0.68362317 424;1683 P52294;O60684;O15131 KPNA1;KPNA6;KPNA5 Importin subunit alpha-5;Importin subunit alpha-5, N-terminally processed;Importin subunit alpha-7;Importin subunit alpha-6 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.8 3.92 2 3 1 1 1 1 1 89.515 88.106 2 3.1314E-14 109826 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 139.86 119.55 97476000 0 89541000 3047100 0 0 0 0 0 0 0 0 0 837280 1211100 2840100 39981 1683;424 35709 333475;333476;333477;333478;333479 264300;264301;264302;264303 264300 4 PLCELQPGAK Unmodified 1111.5696 0.56957969 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 42.078 37.161 2 0.003255 48202 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.624 73.843 143070000 0 143070000 0 0 0 0 0 0 0 0 0 0 0 0 0 39982 848 35710 333480;333481 264304 264304 1 PLDAPAVNK Unmodified 923.50763 0.50763136 690 O95785 WIZ Protein Wiz yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 30.393 30.469 2 0.013016 32994 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 60.436 39.172 169790000 0 0 0 18661000 20850000 0 0 21970000 19385000 28980000 29251000 0 30696000 0 0 39983 690 35711 333482;333483;333484;333485;333486;333487;333488 264305;264306;264307;264308;264309;264310 264306 6 PLDERALQEK Unmodified 1197.6354 0.63535107 44;4563 C4AMC7;Q6VEQ5;A8K0Z3;A8MWX3;Q9NQA3 WASH3P;WASH2P;WASH1;WASH4P;WASH6P Putative WAS protein family homolog 3;WAS protein family homolog 2;WAS protein family homolog 1;Putative WAS protein family homolog 4;WAS protein family homolog 6 no no 0 0 1 By MS/MS 10 0 1 1 28.149 27.767 3 0.014658 30068 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 46.462 20.344 5195500 0 0 0 0 5195500 0 0 0 0 0 0 0 0 0 0 39984 44;4563 35712 333489 264311 264311 1 PLDETLK Unmodified 814.44363 0.44363412 773 P04083 ANXA1 Annexin A1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 31.49 27.007 2 0.0165 35188 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.46 60.934 1748500000 58703000 1660300000 29457000 0 0 0 0 0 0 0 0 0 0 0 0 39985 773 35713 333490;333491;333492;333493 264312;264313;264314;264315;264316;264317 264312 6 PLDFSTNQK Unmodified 1048.5189 0.51892433 535 O75717 WDHD1 WD repeat and HMG-box DNA-binding protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 39.024 38.469 2 2.2593E-42 48799 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 217.02 109.59 300630000 0 160560000 0 8786800 8472900 13164000 12098000 6896500 15705000 10214000 14534000 8544300 13165000 13063000 15425000 39986 535 35714 333494;333495;333496;333497;333498;333499;333500;333501;333502;333503;333504;333505;333506;333507 264318;264319;264320;264321;264322;264323;264324;264325;264326;264327;264328;264329;264330;264331;264332;264333 264322 15 PLDGTTSTDNNNPPSESEDYNLYNQFK Unmodified 3059.3268 0.32683262 2484 Q15042 RAB3GAP1 Rab3 GTPase-activating protein catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 76.359 76.455 3 1.9753E-25 88285 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 76.691 74.106 65734000 0 0 0 0 5293900 5969900 0 6309000 0 8793300 6643000 8573400 4362300 5962700 13826000 39987 2484 35715 333508;333509;333510;333511;333512;333513;333514;333515;333516 264334;264335;264336;264337;264338;264339;264340;264341 264335 8 PLDLAQGAEMK Unmodified 1171.5907 0.59070906 4235 Q9BXW6 OSBPL1A Oxysterol-binding protein-related protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 59.445 53.47 2 0.027178 68850 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 54.539 41.273 39465000 3648100 33946000 1870800 0 0 0 0 0 0 0 0 0 0 0 0 39988 4235 35716 333517;333518;333519 264342 264342 1 PLDPTIK Unmodified 782.4538 0.45380487 4597 Q9NRE2 TSHZ2 Teashirt homolog 2 yes yes 0 0 0 By MS/MS 2 0 1 1 36.803 31.887 2 0.045032 41741 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.616 6.6662 14493000 0 14493000 0 0 0 0 0 0 0 0 0 0 0 0 0 39989 4597 35717 333520 264343 264343 1 PLDSNSGERNDLNLDR Unmodified 1813.8555 0.85546761 2718 Q58WW2 DCAF6 DDB1- and CUL4-associated factor 6 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 40.213 40.433 3 0.0075709 43979 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.815 20.53 24643000 0 0 0 0 3951900 0 0 3627500 0 0 6849900 0 0 0 10213000 39990 2718 35718 333521;333522;333523;333524 264344;264345 264344 2 PLDSNSGERNDLNLDRSCGVPEESASSEK Unmodified 3161.4167 0.41672704 2718 Q58WW2 DCAF6 DDB1- and CUL4-associated factor 6 yes yes 0 0 2 By MS/MS 2 0 1 1 53.356 49.444 4 4.5655E-22 61991 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 81.888 79.448 10899000 0 0 10899000 0 0 0 0 0 0 0 0 0 0 0 0 39991 2718 35719 333525 264346 264346 1 PLDVAFMK Oxidation (M) 935.47864 0.47863942 2474 Q15019 SEPT2 Septin-2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 59.621 53.646 2 0.030365 68772 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.789 48.817 94555000 5338300 75403000 13814000 0 0 0 0 0 0 0 0 0 0 0 0 39992 2474 35720 333526;333527;333528 264347 264347 1 PLDVAFMK Unmodified 919.48372 0.48372479 2474 Q15019 SEPT2 Septin-2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 6.8 3.92 2 3 1 1 1 1 1 73.149 71.76 2 0.025333 82110 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 58.782 42.077 103910000 0 48135000 9487000 0 0 10560000 0 0 0 0 17365000 0 0 0 18364000 39993 2474 35720 333529;333530;333531;333532;333533 264348;264349;264350 264349 3 PLEDQLPLGEYGLK Unmodified 1570.8243 0.82427405 801 P05161 ISG15 Ubiquitin-like protein ISG15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 6 4 2 2 1 1 1 1 84.856 83.069 2 2.1268E-40 103174 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 181.66 139.33 198930000 0 180920000 2744900 0 0 8500700 0 0 0 6755800 0 0 0 0 0 39994 801 35721 333534;333535;333536;333537 264351;264352;264353 264352 2 PLEEEEMEVPVLPK Oxidation (M) 1653.8171 0.81713976 1600 P49790 NUP153 Nuclear pore complex protein Nup153 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.707 71.774 2 8.14E-50 82626 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 174.1 152.7 218420000 0 0 0 11541000 14829000 20302000 16075000 16288000 18451000 21319000 18075000 21215000 18675000 18758000 22897000 39995 1600 35722 333538;333539;333540;333541;333542;333543;333544;333545;333546;333547;333548;333549 264354;264355;264356;264357;264358;264359;264360;264361 264354 2575 8 PLEEEEMEVPVLPK Unmodified 1637.8222 0.82222514 1600 P49790 NUP153 Nuclear pore complex protein Nup153 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 80.492 80.593 2 6.2734E-178 93261 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 229.16 222.92 155900000 0 0 0 0 8930600 18470000 8811500 22105000 13191000 0 21964000 0 0 17951000 44475000 39996 1600 35722 333550;333551;333552;333553;333554;333555;333556;333557 264362;264363;264364;264365;264366;264367;264368;264369;264370 264367 9 PLEELEVLK Unmodified 1068.6067 0.6066767 1187 P25391 LAMA1 Laminin subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 78.192 74.584 2 0.00090526 93251 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 143.73 124.1 64622000 0 60755000 3866800 0 0 0 0 0 0 0 0 0 0 0 0 39997 1187 35723 333558;333559;333560 264371;264372;264373 264372 3 PLEEPDAQGR Unmodified 1110.5306 0.53055165 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 22.66 22.791 2 0.0019733 23966 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 97.635 86.224 76582000 0 0 0 4121000 2624800 9739200 3123500 4368200 6690500 8807200 0 16603000 10166000 10338000 0 39998 4139 35724 333561;333562;333563;333564;333565;333566;333567;333568;333569;333570 264374;264375;264376;264377;264378;264379;264380 264374 5 PLEGLSNGNNITSAPPFASAK Unmodified 2084.0538 0.05383307 4978 Q9UKX7 NUP50 Nuclear pore complex protein Nup50 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 8.24 3.19 2 2 13 4 2 2 1 2 1 2 1 1 1 78.553 77.709 2;3 2.5477E-72 95846 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 192.78 178.33 124920000 0 51927000 0 0 0 12474000 7842500 0 4862600 12648000 8238900 10043000 3916000 5802300 7164300 39999 4978 35725 333571;333572;333573;333574;333575;333576;333577;333578;333579;333580;333581;333582;333583;333584;333585;333586;333587 264381;264382;264383;264384;264385;264386;264387;264388;264389;264390 264384 10 PLEGQAEGDSGECK Unmodified 1475.6198 0.61983694 4978 Q9UKX7 NUP50 Nuclear pore complex protein Nup50 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15.138 14.742 2 3.6275E-40 13781 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 195.25 191.75 185450000 5649700 8847300 0 9774800 6135300 10584000 11178000 8663100 9499000 15104000 19883000 15018000 17396000 17183000 30539000 40000 4978 35726 333588;333589;333590;333591;333592;333593;333594;333595;333596;333597;333598;333599;333600;333601 264391;264392;264393;264394;264395;264396;264397;264398;264399;264400;264401;264402;264403;264404;264405 264395 15 PLEHPPVK Unmodified 915.5178 0.51780212 3408 Q8NCE0 TSEN2 tRNA-splicing endonuclease subunit Sen2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 22.425 19.559 2 0.010673 25043 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 111.82 70.314 11243000 0 0 11243000 0 0 0 0 0 0 0 0 0 0 0 0 40001 3408 35727 333602;333603 264406;264407 264407 2 PLEIRSPSAESK Unmodified 1312.6987 0.69867961 3746 Q96B01 RAD51AP1 RAD51-associated protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 40.066 34.992 3 0.0019044 48176 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.273 41.019 34508000 23197000 8577300 2733400 0 0 0 0 0 0 0 0 0 0 0 0 40002 3746 35728 333604;333605;333606 264408 264408 1 PLELLGEK Unmodified 897.51713 0.51713341 3713 Q969F9 HPS3 Hermansky-Pudlak syndrome 3 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.997 59.109 2 0.011374 66588 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 77.072 34.843 134650000 0 0 0 8638500 9992900 9329000 11583000 10535000 9698200 10198000 10830000 15297000 12970000 10423000 15160000 40003 3713 35729 333607;333608;333609;333610;333611;333612;333613;333614;333615;333616;333617;333618 264409;264410;264411;264412;264413;264414 264413 5 PLEMLQDQGK Unmodified 1157.5751 0.575059 3384 Q8NB16 MLKL Mixed lineage kinase domain-like protein yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 46.783 47.025 2 0.00089969 53260 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 116.37 85.635 79687000 0 0 0 0 5309900 9054300 4876300 0 3964500 12450000 9597200 9525300 7691200 6761700 10457000 40004 3384 35730 333619;333620;333621;333622;333623;333624;333625;333626;333627;333628 264415;264416 264415 2 PLEMLQDQGK Oxidation (M) 1173.57 0.56997362 3384 Q8NB16 MLKL Mixed lineage kinase domain-like protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 2 1 1 1 30.05 29.89 2 0.0074246 37203 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.098 60.858 122830000 0 10506000 0 6375500 3204800 8368600 6223500 4712900 3017300 13534000 17862000 10258000 24673000 0 14091000 40005 3384 35730 333629;333630;333631;333632;333633;333634;333635;333636;333637;333638;333639;333640;333641 264417;264418;264419 264417 4947 2 PLEMSSEAK Oxidation (M) 1006.4641 0.46411156 4583 Q9NQZ5 STARD7 StAR-related lipid transfer protein 7, mitochondrial yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 9.4749 6.1663 2 0.0026446 8741 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.37 35.909 24734000 0 24734000 0 0 0 0 0 0 0 0 0 0 0 0 0 40006 4583 35731 333642;333643 264420 264420 5985 1 PLEMSSEAK Unmodified 990.4692 0.46919694 4583 Q9NQZ5 STARD7 StAR-related lipid transfer protein 7, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 26.203 21.943 2 0.007431 29072 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.027 54.725 63701000 0 63701000 0 0 0 0 0 0 0 0 0 0 0 0 0 40007 4583 35731 333644 264421 264421 1 PLENGTGFQAQDISGQK Unmodified 1788.8642 0.86424139 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 2 1 1 1 2 1 54.31 53.474 2 1.6157E-62 67230 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 191.06 171.93 145580000 0 101400000 0 0 0 0 12953000 0 0 0 0 12555000 10460000 0 8212900 40008 1601 35732 333645;333646;333647;333648;333649;333650;333651;333652;333653 264422;264423;264424;264425;264426;264427;264428 264423 7 PLENLEEEGLPK Unmodified 1366.698 0.6980109 2471 Q15008 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 66.182 64.845 2 3.7014E-17 74786 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 145.55 117.54 2777100000 49308000 1879200000 16300000 61778000 65035000 69570000 23969000 23161000 20403000 126810000 152190000 184110000 16761000 26302000 62144000 40009 2471 35733 333654;333655;333656;333657;333658;333659;333660;333661;333662;333663;333664;333665;333666;333667;333668;333669 264429;264430;264431;264432;264433;264434;264435;264436;264437;264438;264439;264440;264441;264442;264443 264443 7 PLEPVSTVQVEPAVK Unmodified 1591.8821 0.88212328 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.29 2.21 1 1 19 2 1 1 1 2 1 2 1 2 2 2 2 2 69.705 69.397 2;3 2.9129E-10 79497 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 68.262 47.799 1140100000 0 250550000 0 29813000 37881000 46287000 80585000 42682000 71928000 67694000 112200000 117480000 92162000 83260000 107550000 40010 5216 35734 333670;333671;333672;333673;333674;333675;333676;333677;333678;333679;333680;333681;333682;333683;333684;333685;333686;333687;333688;333689;333690 264444;264445;264446;264447;264448;264449;264450;264451;264452;264453;264454;264455;264456;264457;264458;264459;264460;264461;264462;264463;264464 264447 20 PLEQSVEDLSK Unmodified 1243.6296 0.62959699 664 O95466 FMNL1 Formin-like protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 55.554 49.739 2 3.7642E-05 64250 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.57 79.192 22474000 0 22474000 0 0 0 0 0 0 0 0 0 0 0 0 0 40011 664 35735 333691 264465 264465 1 PLEVELR Unmodified 854.48617 0.48616764 1595 P49755 TMED10 Transmembrane emp24 domain-containing protein 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 52.504 52.719 2 0.023384 59860 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 88.029 37.909 381810000 0 0 0 0 16734000 40951000 19320000 20343000 32870000 46325000 36869000 38228000 39812000 34234000 56126000 40012 1595 35736 333692;333693;333694;333695;333696;333697;333698;333699;333700;333701;333702 264466;264467;264468;264469;264470;264471;264472 264470 6 PLEVLLLEK Unmodified 1052.6481 0.64814759 1406;2357 P39880;Q13948 CUX1 Homeobox protein cut-like 1;Protein CASP no no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84.302 83.264 2 0.0021179 106173 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 117.89 32.214 165200000 17669000 1702300 17342000 3513700 4640900 8281900 8873000 5917000 12137000 15904000 14420000 17132000 7638000 10608000 19421000 40013 1406;2357 35737 333703;333704;333705;333706;333707;333708;333709;333710;333711;333712;333713;333714;333715;333716;333717;333718 264473;264474;264475;264476;264477;264478;264479;264480;264481 264476 8 PLEVNAIK Unmodified 882.51747 0.51746776 312 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 43.738 43.974 2 0.0096391 49457 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 82.241 15.811 295380000 0 0 0 18265000 0 22800000 25249000 26218000 20013000 24259000 38255000 41268000 25856000 21793000 31401000 40014 312 35738 333719;333720;333721;333722;333723;333724;333725;333726;333727;333728;333729 264482;264483;264484;264485;264486;264487 264483 4 PLEVTGQAEK Unmodified 1070.5608 0.56078914 216 O14795 UNC13B Protein unc-13 homolog B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 25.928 25.321 2 0.0054644 27203 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 68.846 40.964 60596000 0 42005000 0 0 0 0 0 0 0 5972400 5435500 0 3719300 3463700 0 40015 216 35739 333730;333731;333732;333733;333734;333735 264488;264489;264490;264491;264492;264493 264489 5 PLFATNPFDQDVEK Unmodified 1619.7831 0.78313752 3659 Q92783 STAM Signal transducing adapter molecule 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.56 3.62 4 1 11 1 3 1 1 1 1 1 1 1 1 1 1 1 1 83.112 81.693 2;3 3.5731E-50 94902 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 210.35 199.59 579040000 41481000 354980000 7452300 5978100 6787600 0 10133000 13248000 10352000 21312000 19500000 28351000 12040000 14033000 33396000 40016 3659 35740 333736;333737;333738;333739;333740;333741;333742;333743;333744;333745;333746;333747;333748;333749;333750;333751 264494;264495;264496;264497;264498;264499;264500;264501;264502;264503;264504;264505;264506;264507;264508;264509;264510 264508 16 PLFCGNSEADQLGK Unmodified 1534.7086 0.70859237 956 P11802 CDK4 Cyclin-dependent kinase 4 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 63.802 58.46 2 2.0956E-23 75055 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 147.62 141.98 37651000 0 37651000 0 0 0 0 0 0 0 0 0 0 0 0 0 40017 956 35741 333752;333753 264511 264511 1 PLFFGEGTVLR Unmodified 1234.671 0.67100829 1609 P49902 NT5C2 Cytosolic purine 5'-nucleotidase yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 84.788 84.931 2 0.011977 97545 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 56.563 26.754 37814000 0 0 0 0 0 0 0 5224000 0 6995200 3488500 3384400 2460300 3084800 13177000 40018 1609 35742 333754;333755;333756;333757;333758;333759;333760 264512;264513;264514;264515 264513 4 PLFGPGYTGIR Unmodified 1176.6291 0.62914348 1488 P45974 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.824 72.887 2 0.0053468 83109 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.962 58.049 249900000 0 0 0 7764900 4643800 28957000 11124000 11908000 9481000 20230000 26472000 25307000 13325000 23140000 67545000 40019 1488 35743 333761;333762;333763;333764;333765;333766;333767;333768;333769;333770;333771;333772 264516;264517;264518;264519;264520;264521 264517 3 PLFITTDSSK Unmodified 1107.5812 0.58119023 3061 Q7LBC6 KDM3B Lysine-specific demethylase 3B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 2 1 1 1 56.901 56.886 2 0.0004776 64519 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 128.38 108.75 588100000 0 0 0 50177000 48076000 77660000 56831000 73210000 66756000 74201000 0 0 73967000 67223000 0 40020 3061 35744 333773;333774;333775;333776;333777;333778;333779;333780;333781;333782;333783;333784 264522;264523;264524;264525;264526;264527;264528;264529;264530;264531;264532;264533 264529 11 PLFNMEDK Oxidation (M) 1008.4586 0.45863226 2348 Q13867 BLMH Bleomycin hydrolase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 33.839 33.756 2 0.0047601 37183 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 90.37 75.835 128500000 0 0 0 82199000 7352400 13774000 7490500 11345000 6342000 0 0 0 0 0 0 40021 2348 35745 333785;333786;333787;333788;333789;333790 264534;264535;264536;264537 264537 3831 4 PLFNMEDK Unmodified 992.46372 0.46371763 2348 Q13867 BLMH Bleomycin hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55.596 54.85 2 0.0055596 62507 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 141.52 122.71 391620000 14799000 0 26297000 140440000 11213000 15361000 9392800 26906000 8717300 24754000 20527000 33968000 15557000 15117000 28566000 40022 2348 35745 333791;333792;333793;333794;333795;333796;333797;333798;333799;333800;333801;333802;333803;333804 264538;264539;264540;264541;264542;264543;264544;264545;264546;264547;264548;264549;264550 264544 12 PLFPGNSEIDQINK Unmodified 1570.7991 0.79912193 5069 Q9UQ88 CDK11A Cyclin-dependent kinase 11A yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 7 3.69 1 1 3 2 1 1 1 76.101 74.549 2 3.6327E-14 92683 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.29 88.315 71554000 0 58858000 0 0 0 0 3812900 0 0 0 0 0 3616200 5266300 0 40023 5069 35746 333805;333806;333807;333808;333809 264551;264552;264553 264551 3 PLFQLQSGHK Unmodified 1153.6244 0.62439245 2443 Q14746 COG2 Conserved oligomeric Golgi complex subunit 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 48.995 49.105 3 0.040075 55110 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 32.209 24.795 93004000 0 0 0 5072000 5506800 13787000 8497500 6920200 0 10947000 0 15101000 0 8450000 18723000 40024 2443 35747 333810;333811;333812;333813;333814;333815;333816;333817;333818 264554;264555 264555 2 PLFSSASPQDSSPR Unmodified 1474.7052 0.70522155 174 O00712 NFIB Nuclear factor 1 B-type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.895 48.057 2 9.8013E-86 54998 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 234.92 152.63 701920000 0 0 0 37894000 29338000 46209000 49054000 37349000 52952000 74278000 89545000 56844000 79939000 64443000 84075000 40025 174 35748 333819;333820;333821;333822;333823;333824;333825;333826;333827;333828;333829;333830 264556;264557;264558;264559;264560;264561;264562;264563;264564;264565;264566;264567;264568 264567 13 PLFTALVTQCQK Unmodified 1404.7435 0.74352131 3412 Q8NCW5 APOA1BP NAD(P)H-hydrate epimerase yes yes 0 0 0 By MS/MS 10 0 1 1 78.567 78.813 2 0.040531 90555 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.819 5.5356 13352000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13352000 40026 3412 35749 333831 264569 264569 1 PLFTANPFEQDVEK Unmodified 1633.7988 0.79878758 554 O75886 STAM2 Signal transducing adapter molecule 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.12 3.72 2 1 5 2 1 1 1 1 1 1 84.441 82.855 2 3.3586E-09 103254 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.68 83.64 96090000 0 74652000 0 0 2092500 0 3641400 0 0 0 0 0 0 0 15705000 40027 554 35750 333832;333833;333834;333835;333836;333837;333838;333839 264570;264571;264572;264573;264574;264575;264576 264571 7 PLFTYVNEK Unmodified 1109.5757 0.57571092 1119 P21128 ENDOU Poly(U)-specific endoribonuclease yes yes 0 0 0 By MS/MS 10 0 1 1 62.76 62.066 2 0.016766 71609 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 56.258 42.679 6640900 0 0 0 6640900 0 0 0 0 0 0 0 0 0 0 0 40028 1119 35751 333840 264577 264577 1 PLFVNVNDQTNEGIMHESK Unmodified 2171.0317 0.031717419 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 78.857 70.726 3 0.0019404 92954 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 41.261 33.255 18386000 18386000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40029 1300 35752 333841 264578 264578 1 PLGELWK Unmodified 841.46979 0.46978929 1170 P23919 DTYMK Thymidylate kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65.589 64.493 2 0.01787 73053 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 113.08 66.038 770810000 316170000 77360000 72206000 16800000 12737000 34951000 22458000 24673000 16178000 28774000 25529000 25055000 26959000 20812000 50148000 40030 1170 35753 333842;333843;333844;333845;333846;333847;333848;333849;333850;333851;333852;333853;333854;333855;333856 264579;264580;264581;264582;264583;264584;264585 264581 7 PLGEQERAVILELK Unmodified 1593.909 0.90900673 1704 P52888 THOP1 Thimet oligopeptidase yes yes 0 0 1 By MS/MS 2 0 1 1 82.913 74.783 3 0.0017864 97754 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.104 35.147 16169000 16169000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40031 1704 35754 333857 264586 264586 1 PLGFSFGCSSAQEAQK Unmodified 1712.7828 0.78281994 3061 Q7LBC6 KDM3B Lysine-specific demethylase 3B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 73.221 73.591 2 1.5526E-28 84257 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 169.23 157.69 12385000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12385000 40032 3061 35755 333858;333859;333860 264587;264588;264589 264587 3 PLGGIQPSSQTIQPK Unmodified 1549.8464 0.84640648 2360 Q14004 CDK13 Cyclin-dependent kinase 13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 54.225 53.129 2 7.5741E-23 67461 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.21 99.742 49811000 0 26370000 0 3638500 3146200 0 5415900 3999800 0 0 0 0 0 7240300 0 40033 2360 35756 333861;333862;333863;333864;333865;333866 264590;264591;264592;264593;264594;264595 264591 6 PLGGLPETAK Unmodified 981.5495 0.54949617 2086 Q03001 DST Dystonin yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 43.285 42.634 2 0.0066745 54990 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.287 37.205 103260000 0 41832000 1124900 0 5095000 6221800 4598400 6861400 4957100 0 9620500 5762400 6909900 0 10282000 40034 2086 35757 333867;333868;333869;333870;333871;333872;333873;333874;333875;333876;333877 264596;264597 264596 2 PLGPMLLNGLTK Oxidation (M) 1268.7162 0.71624393 2828 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog yes yes 0 1 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 80.829 80.937 2 0.0015578 93625 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 63.32 45.095 11589000 0 0 0 0 0 4458300 0 0 0 2170300 0 0 0 0 4960700 40035 2828 35758 333878;333879;333880 264598;264599 264598 4470 2 PLHDSEIAK Unmodified 1008.524 0.52400971 3621 Q92547 TOPBP1 DNA topoisomerase 2-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14.105 13.832 2 0.015812 18334 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.684 50.071 62124000 0 7730800 12343000 2769600 1374600 3066100 2839000 2659900 2098600 3791600 3737700 4837200 4905500 3723700 6246400 40036 3621 35759 333881;333882;333883;333884;333885;333886;333887;333888;333889;333890;333891;333892;333893;333894 264600;264601;264602;264603;264604;264605;264606 264602 7 PLHELIMQLLEETPEEK Unmodified 2048.05 0.049993245 1965 P68402 PAFAH1B2 Platelet-activating factor acetylhydrolase IB subunit beta yes yes 0 0 0 By MS/MS 3 0 1 1 97.631 94.323 3 0.0002463 113104 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 65.107 61.129 2796500 0 2796500 0 0 0 0 0 0 0 0 0 0 0 0 0 40037 1965 35760 333895 264607 264607 1 PLHFTYNSCPEGAR Unmodified 1647.7464 0.74637486 2525 Q15386 UBE3C Ubiquitin-protein ligase E3C yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 49.042 49.094 3 0.024616 54182 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 28.146 23.344 18825000 0 0 0 2744200 0 0 0 0 0 0 0 0 0 0 16080000 40038 2525 35761 333896;333897 264608 264608 0 PLHPLLVVAPNQLK Unmodified 1537.9344 0.93443362 4086 Q9BQ52 ELAC2 Zinc phosphodiesterase ELAC protein 2 yes yes 0 0 0 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 77.79 77.932 3 0.0057899 89546 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.317 34.436 28365000 0 0 0 0 0 3863300 0 0 0 0 0 6218500 0 2972400 15311000 40039 4086 35762 333898;333899;333900;333901 264609 264609 1 PLHPNATST Unmodified 936.46649 0.46649483 3746 Q96B01 RAD51AP1 RAD51-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.91 13.065 2 0.0034457 12415 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 94.262 83.389 310160000 0 0 0 21199000 16908000 20549000 40477000 22850000 30446000 26415000 32927000 19933000 41127000 18159000 19168000 40040 3746 35763 333902;333903;333904;333905;333906;333907;333908;333909;333910;333911;333912;333913 264610;264611;264612;264613;264614;264615;264616;264617;264618;264619;264620 264616 11 PLIACVEK Unmodified 928.50519 0.50518852 2331 Q13619 CUL4A Cullin-4A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 45.09 43.77 2 0.0082674 48275 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 86.794 38.038 774280000 78180000 326380000 42380000 0 12673000 22658000 11831000 12377000 13275000 26862000 53343000 41714000 35616000 25117000 71875000 40041 2331 35764 333914;333915;333916;333917;333918;333919;333920;333921;333922;333923;333924;333925;333926;333927;333928 264621;264622;264623;264624;264625;264626;264627;264628;264629 264629 8 PLILPDTK Unmodified 895.53787 0.53786886 775 P04150 NR3C1 Glucocorticoid receptor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 58.122 57.216 2 0.017407 74453 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.59 44.879 220610000 0 46253000 2519400 0 0 27819000 0 15124000 23752000 25773000 0 29892000 25077000 24406000 0 40042 775 35765 333929;333930;333931;333932;333933;333934;333935;333936;333937 264630;264631 264630 0 PLILPDTKPK Unmodified 1120.6856 0.68559572 775 P04150 NR3C1 Glucocorticoid receptor yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 50.117 50.121 2 0.03732 56647 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 91.069 59.133 51163000 0 0 0 4482200 4674100 0 5657200 7816600 0 0 11188000 0 10790000 6554600 0 40043 775 35766 333938;333939;333940;333941;333942;333943;333944 264632 264632 1 PLILQSLGPK Unmodified 1064.6594 0.65938097 5236 Q9Y5K6 CD2AP CD2-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 1 1 1 1 1 1 1 1 1 1 1 1 1 76.561 76.151 2 0.0014968 87720 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 90.709 71.933 73334000 0 3116300 1772700 4113100 4553800 5274300 0 4157600 2905200 8183900 6903300 10656000 4272800 5319500 12106000 40044 5236 35767 333945;333946;333947;333948;333949;333950;333951;333952;333953;333954;333955;333956;333957 264633;264634;264635;264636;264637;264638;264639;264640;264641;264642;264643;264644 264634 12 PLIPFEEFINEPLNEVLEMDK Oxidation (M) 2531.2505 0.25054355 2112 Q05086 UBE3A Ubiquitin-protein ligase E3A yes yes 0 1 0 By MS/MS 2 0 1 1 102.27 94.137 3 5.6375E-07 121134 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.765 65.316 35682000 35682000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40045 2112 35768 333958 264645 264645 3415 1 PLIPFEEFINEPLNEVLEMDK Unmodified 2515.2556 0.25562892 2112 Q05086 UBE3A Ubiquitin-protein ligase E3A yes yes 0 0 0 By MS/MS 2 0 2 2 103.47 95.344 2;3 1.035E-12 122563 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 112.5 92.662 20015000 20015000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40046 2112 35768 333959;333960 264646;264647 264647 2 PLIPLQK Unmodified 807.52182 0.52182486 3976 Q96RT1 ERBB2IP Protein LAP2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 58.293 57.229 2 0.017078 63471 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 114.67 39.835 78747000 11457000 10860000 0 0 0 5893500 4250200 0 3862200 5816400 6607200 8947000 5503900 4479600 11070000 40047 3976 35769 333961;333962;333963;333964;333965;333966;333967;333968;333969;333970;333971 264648;264649;264650;264651;264652;264653;264654;264655;264656;264657;264658 264653 11 PLIPTEASIR Unmodified 1095.6288 0.62880913 4163 Q9BUK6 MSTO1 Protein misato homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 65.878 65.873 2 0.0053211 74504 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 69.423 44.501 47952000 0 0 0 3326300 3535500 6128600 5806300 4973800 0 7659700 0 0 0 5885500 10636000 40048 4163 35770 333972;333973;333974;333975;333976;333977;333978;333979;333980;333981 264659;264660;264661;264662;264663;264664;264665;264666;264667 264665 9 PLIQDSDLK Unmodified 1027.555 0.55497548 2842 Q659A1 ICE2 Little elongation complex subunit 2 yes yes 0 0 0 By MS/MS 2 0 1 1 51.95 46.177 2 0.007262 59943 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.429 28.671 18553000 0 18553000 0 0 0 0 0 0 0 0 0 0 0 0 0 40049 2842 35771 333982 264668 264668 1 PLIQEESDTIVSSSK Unmodified 1631.8254 0.82539626 2195 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 60.517 59.596 2 9.9764E-50 75425 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 161.48 136.62 95185000 0 63922000 0 0 2234600 3391300 4275300 0 0 4095800 4565200 6376800 2821500 0 3503100 40050 2195 35772 333983;333984;333985;333986;333987;333988;333989;333990;333991;333992 264669;264670;264671;264672;264673;264674;264675 264672 7 PLIQQAMAK Unmodified 998.55829 0.55828672 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44.134 43.11 2 0.00024265 59698 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 151.29 93.829 694940000 184940000 202490000 10648000 13746000 15971000 21809000 18940000 27545000 10764000 19713000 27244000 35585000 26358000 27344000 51850000 40051 2930 35773 333993;333994;333995;333996;333997;333998;333999;334000;334001;334002;334003;334004;334005;334006;334007 264676;264677;264678;264679;264680;264681;264682;264683;264684;264685;264686;264687;264688;264689;264690;264691 264682 13 PLIQQAMAK Oxidation (M) 1014.5532 0.55320134 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 2 1 6 1 1 1 1 1 1 1 1 1 28.715 27.289 2 0.0035792 29706 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 77.741 42.492 163380000 58707000 5418200 11339000 0 12450000 14965000 16510000 0 0 16634000 0 16086000 11266000 0 0 40052 2930 35773 334008;334009;334010;334011;334012;334013;334014;334015;334016 264692;264693;264694;264695;264696;264697;264698;264699;264700;264701 264701 4558 10 PLISTPPVSSQPK Unmodified 1349.7555 0.7554662 4138 Q9BTA9 WAC WW domain-containing adapter protein with coiled-coil yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57.519 56.613 2 2.5191E-20 64565 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 157.24 134.6 777540000 11601000 92873000 0 34346000 38057000 47246000 50146000 55765000 45546000 61358000 63073000 69622000 75022000 48143000 84739000 40053 4138 35774 334017;334018;334019;334020;334021;334022;334023;334024;334025;334026;334027;334028;334029;334030 264702;264703;264704;264705;264706;264707;264708;264709;264710;264711;264712;264713;264714;264715;264716;264717 264711 16 PLISVYSEK Unmodified 1034.5648 0.56481189 1377 P36578 RPL4 60S ribosomal protein L4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 54.796 54.928 2 0.0032698 62095 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 93.162 44.407 152680000 0 0 0 7943400 8567700 12451000 6478300 9447200 6651200 13910000 14672000 21234000 16791000 17091000 17447000 40054 1377 35775 334031;334032;334033;334034;334035;334036;334037;334038;334039;334040;334041;334042 264718;264719;264720;264721;264722;264723;264724;264725;264726;264727;264728 264719 10 PLIWIESVIEK Unmodified 1325.7595 0.75948895 4232 Q9BXS5;Q9Y6Q5 AP1M1;AP1M2 AP-1 complex subunit mu-1;AP-1 complex subunit mu-2 yes no 0 0 0 By MS/MS 2 0 1 1 98.305 90.174 2 0.025403 116360 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.076 40.989 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40055 4232 35776 334043 264729 264729 1 PLLDEIVPVYRR Unmodified 1468.8402 0.84019889 4382 Q9H3P7 ACBD3 Golgi resident protein GCP60 yes yes 0 0 1 By matching By matching By MS/MS 10 0 3 1 1 1 81.511 81.648 3 0.027627 94136 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 28.903 17.29 12481000 0 0 0 0 0 2974600 0 0 1519600 0 0 0 0 0 7986900 40056 4382 35777 334044;334045;334046 264730 264730 1 PLLESGTLGTK Unmodified 1114.6234 0.6233894 1137 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.16 3.73 5 2 12 2 3 2 1 1 1 1 1 1 1 1 1 1 1 1 54.122 52.435 2 2.3457E-16 70528 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 163.94 74.39 6069600000 334100000 4446300000 270850000 33094000 24824000 73757000 42734000 36057000 36476000 74193000 135130000 115750000 56730000 111080000 278550000 40057 1137 35778 334047;334048;334049;334050;334051;334052;334053;334054;334055;334056;334057;334058;334059;334060;334061;334062;334063;334064;334065 264731;264732;264733;264734;264735;264736;264737;264738;264739;264740;264741;264742;264743;264744;264745;264746;264747;264748;264749;264750;264751;264752;264753 264742 15 PLLGDQSHAGSELLQR Unmodified 1719.8904 0.89039656 2211 Q12933 TRAF2 TNF receptor-associated factor 2 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 61.751 61.823 3 0.044931 69810 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 20.093 8.8134 35568000 0 0 0 0 2517000 9338800 3833600 3686600 0 0 0 0 0 0 16192000 40058 2211 35779 334066;334067;334068;334069;334070 264754 264754 1 PLLGGDVSAPEGTK Unmodified 1339.6983 0.69834526 3269 Q8IY22 CMIP C-Maf-inducing protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 55.23 53.468 2 5.0741E-22 68107 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 167.6 140.27 140920000 0 110530000 1734500 0 0 11337000 0 0 0 8835000 0 8476600 0 0 0 40059 3269 35780 334071;334072;334073;334074;334075;334076;334077 264755;264756;264757;264758;264759;264760 264757 5 PLLGHDAVIQALAQK Unmodified 1572.8988 0.8987764 2164 Q08AD1 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 yes yes 0 0 0 By MS/MS 10 0 1 1 76.923 77.21 3 0.011894 88645 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.616 24.581 16074000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16074000 40060 2164 35781 334078 264761 264761 1 PLLGMNPFQK Oxidation (M) 1159.606 0.6059652 3915 Q96L91 EP400 E1A-binding protein p400 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 69.982 70.019 2 0.0031917 80723 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 71.342 59.932 45380000 0 0 0 4098500 3237900 5860500 0 0 5085600 0 7446400 9833500 5744000 0 4074200 40061 3915 35782 334079;334080;334081;334082;334083;334084;334085;334086 264762;264763;264764;264765;264766;264767;264768;264769;264770 264762 5414 8 PLLGMNPFQK Unmodified 1143.6111 0.61105057 3915 Q96L91 EP400 E1A-binding protein p400 yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 79.968 80.107 2 0.029851 92307 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.218 21.368 19892000 0 0 0 0 0 2059900 0 2100700 3638100 2040000 0 2998400 0 1357600 5697400 40062 3915 35782 334087;334088;334089;334090;334091;334092;334093 264771 264771 1 PLLIDMNK Oxidation (M) 958.51575 0.5157532 2501 Q15149 PLEC Plectin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 48.593 43.799 2 0.020153 57065 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.671 34.928 28428000 0 23244000 5183600 0 0 0 0 0 0 0 0 0 0 0 0 40063 2501 35783 334094;334095;334096 264772;264773 264773 4107 2 PLLIDMNK Unmodified 942.52084 0.52083858 2501 Q15149 PLEC Plectin yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 64.626 64.665 2 0.0069006 74059 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 91.626 65.687 18998000 0 0 0 0 3556400 0 3804200 0 0 0 6965700 0 0 4672200 0 40064 2501 35783 334097;334098;334099;334100 264774;264775;264776;264777 264775 4 PLLIQPSPSLQPSFNPGK Unmodified 1919.0516 0.051648225 2675 Q3T8J9 GON4L GON-4-like protein no no 0 0 0 By MS/MS 10 0 1 1 84.487 84.568 2 0.00025066 98320 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 58.676 37.045 2483900 0 0 0 0 0 0 0 0 0 0 0 0 2483900 0 0 40065 2675 35784 334101 264778 264778 1 PLLLPQPEVLSPTVK Unmodified 1629.9705 0.97054436 3241 Q8IWI9 MGA MAX gene-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 87.684 87.754 2 0.00021153 101859 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 69.349 68.309 32815000 0 0 0 1055300 1972000 3118500 1855400 2100300 2409400 4283300 2699000 2877900 2188500 2896300 5359700 40066 3241 35785 334102;334103;334104;334105;334106;334107;334108;334109;334110;334111;334112;334113 264779;264780;264781;264782;264783;264784;264785;264786;264787;264788;264789;264790;264791;264792 264781 14 PLLLSAPGGQEDPAPEIPSSAPAAPSSAPR Unmodified 2879.4665 0.46650141 2299 Q13487 SNAPC2 snRNA-activating protein complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 83.181 83.244 3 5.8796E-53 96411 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 65.171 58.447 112790000 0 0 0 3296900 11474000 10278000 6529500 9665400 9185400 13420000 8358200 11060000 7503300 6809200 15214000 40067 2299 35786 334114;334115;334116;334117;334118;334119;334120;334121;334122;334123;334124;334125 264793;264794;264795;264796;264797;264798;264799;264800;264801;264802;264803;264804 264794 12 PLLPEPEEK Unmodified 1050.5597 0.55972651 1113 P20810 CAST Calpastatin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 52.049 50.818 2 5.2567E-05 65170 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 153.04 112.77 3419100000 57663000 2643000000 26089000 36474000 30431000 44468000 30203000 24050000 54281000 46214000 81147000 111120000 50232000 62120000 121550000 40068 1113 35787 334126;334127;334128;334129;334130;334131;334132;334133;334134;334135;334136;334137;334138;334139;334140;334141;334142 264805;264806;264807;264808;264809;264810;264811;264812;264813;264814;264815;264816;264817;264818;264819;264820;264821;264822;264823;264824;264825;264826;264827;264828 264809 20 PLLPEPEEKPK Unmodified 1275.7075 0.70745338 1113 P20810 CAST Calpastatin yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 6.56 3.86 3 1 5 1 2 1 1 1 1 1 1 46.915 44.645 3 0.00016841 56127 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 108.47 91.632 397110000 4286400 182120000 106500000 0 0 0 14237000 0 0 9281800 12340000 23526000 0 0 44823000 40069 1113 35788 334143;334144;334145;334146;334147;334148;334149;334150;334151 264829;264830;264831;264832;264833;264834;264835 264833 6 PLLPEPEEKPKPR Unmodified 1528.8613 0.86132826 1113 P20810 CAST Calpastatin yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.64 1.67 1 21 1 2 1 2 2 2 2 2 2 2 2 2 39.694 39.551 3;4 6.2144E-06 44474 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 76.073 60.528 570160000 27948000 0 0 40141000 29914000 0 53639000 41507000 13206000 35735000 62771000 107330000 40943000 36198000 80824000 40070 1113 35789 334152;334153;334154;334155;334156;334157;334158;334159;334160;334161;334162;334163;334164;334165;334166;334167;334168;334169;334170;334171;334172;334173 264836;264837;264838;264839;264840;264841;264842;264843;264844;264845;264846;264847;264848;264849;264850;264851;264852;264853;264854;264855;264856 264853 15 PLLPGQTPEAAK Unmodified 1220.6765 0.6764876 5025 Q9UN36 NDRG2 Protein NDRG2 yes yes 0 0 0 By MS/MS By MS/MS 5 3.56 1 1 1 2 1 51.427 47.663 2 0.005469 54914 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 54.191 9.23 46521000 0 39543000 0 6978500 0 0 0 0 0 0 0 0 0 0 0 40071 5025 35790 334174;334175;334176 264857;264858 264858 1 PLLPIPITQK Unmodified 1118.7063 0.70633117 2368 Q14119 VEZF1 Vascular endothelial zinc finger 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 83.355 83.418 2 0.00080978 96802 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 119.41 107.17 268450000 0 0 0 7282900 7584900 24069000 13519000 16174000 30302000 25342000 26997000 26051000 20522000 26134000 44476000 40072 2368 35791 334177;334178;334179;334180;334181;334182;334183;334184;334185;334186;334187;334188 264859;264860;264861;264862;264863;264864;264865;264866;264867;264868;264869;264870 264867 12 PLLPIPITQKPQGAPETLK Unmodified 2040.1983 0.19831246 2368 Q14119 VEZF1 Vascular endothelial zinc finger 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.102 82.163 3 1.0011E-46 94729 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 113.53 104.48 143750000 0 0 0 2262000 5647200 8110500 8434600 16438000 6744100 17631000 13216000 12762000 9534600 13409000 29559000 40073 2368 35792 334189;334190;334191;334192;334193;334194;334195;334196;334197;334198;334199;334200 264871;264872;264873;264874;264875;264876;264877;264878;264879;264880;264881;264882 264874 12 PLLPSQLVR Unmodified 1021.6284 0.6284152 1006 P14735 IDE Insulin-degrading enzyme yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.924 73.986 2 0.036457 85777 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 45.68 5.4118 288770000 0 0 0 128450000 7553900 12496000 7766300 13470000 5045600 10273000 20437000 12859000 8544300 14752000 47121000 40074 1006 35793 334201;334202;334203;334204;334205;334206;334207;334208;334209;334210;334211;334212 264883 264883 1 PLLPTPDLTLK Unmodified 1206.7224 0.72237516 2918 Q6P1L5 FAM117B Protein FAM117B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 85.6 84.931 2 0.00083155 106235 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.692 84.705 75306000 0 28531000 1119300 0 3133000 3582100 3819500 3366400 3906700 4449800 4547300 4165400 3852600 3525100 7307700 40075 2918 35794 334213;334214;334215;334216;334217;334218;334219;334220;334221;334222;334223;334224;334225;334226 264884;264885;264886;264887;264888;264889;264890;264891;264892;264893;264894;264895;264896;264897 264888 14 PLLPVGNK Unmodified 836.51199 0.51198846 4593 Q9NR50 EIF2B3 Translation initiation factor eIF-2B subunit gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.4 3.68 4 1 10 1 2 2 1 1 1 1 1 1 1 1 1 1 51.162 49.468 2 0.0089849 55638 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 84.359 43.056 190070000 38408000 28114000 9271700 0 0 15510000 0 7953200 9168500 11022000 16951000 12809000 6068300 13810000 20989000 40076 4593 35795 334227;334228;334229;334230;334231;334232;334233;334234;334235;334236;334237;334238;334239;334240;334241 264898;264899;264900;264901;264902;264903;264904;264905;264906;264907;264908;264909 264902 12 PLLPYTPGSDVAGVIEAVGDNASAFK Unmodified 2587.317 0.31698363 2153 Q08257 CRYZ Quinone oxidoreductase yes yes 0 0 0 By MS/MS 2 0 1 1 100.11 95.397 3 9.8577E-26 117929 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.926 90.429 23466000 0 23466000 0 0 0 0 0 0 0 0 0 0 0 0 0 40077 2153 35796 334242 264910 264910 1 PLLQSEEDVSQFDSK Unmodified 1720.8156 0.81555986 1158 P23443 RPS6KB1 Ribosomal protein S6 kinase beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 66.176 66.218 2 8.9643E-31 75191 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 147.71 113.17 56655000 0 0 0 2676900 2688400 9050400 4040400 2642000 0 4595800 7743800 0 7518900 6300800 9397700 40078 1158 35797 334243;334244;334245;334246;334247;334248;334249;334250;334251;334252 264911;264912;264913;264914;264915;264916;264917;264918;264919;264920 264914 10 PLLQSPK Unmodified 781.46979 0.46978929 2833 Q5VZK9 LRRC16A Leucine-rich repeat-containing protein 16A yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 30.365 30.331 2 0.044016 33124 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.993 6.6349 82075000 0 0 0 11644000 6833500 18073000 12512000 7882900 11303000 13828000 0 0 0 0 0 40079 2833 35798 334253;334254;334255;334256;334257;334258;334259 264921 264921 1 PLLQVSR Unmodified 811.49159 0.49158736 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 2 2 2 1 2 2 3 2 2 1 1 41.382 41.575 2 0.023433 45625 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 85.359 5.4203 1652800000 0 0 0 82236000 109770000 221230000 119770000 83662000 130960000 186240000 166040000 203580000 166160000 3781300 179340000 40080 1356 35799 334260;334261;334262;334263;334264;334265;334266;334267;334268;334269;334270;334271;334272;334273;334274;334275;334276;334277;334278;334279;334280 264922;264923;264924;264925;264926;264927 264923 5 PLLQVSRQEEEMMAK Oxidation (M) 1803.8859 0.8859048 1356 P35579 MYH9 Myosin-9 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.6 3.67 3 7 2 1 1 1 1 1 1 1 1 54.964 53.064 3 0.00015943 58059 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.244 48.36 352700000 158970000 0 2122700 0 9232300 46423000 14036000 0 0 32851000 0 33051000 0 14466000 41547000 40081 1356 35800 334281;334282;334283;334284;334285;334286;334287;334288;334289;334290 264928;264929;264930;264931;264932;264933;264934;264935 264935 2088;2089 8 PLLQVSRQEEEMMAK Unmodified 1787.891 0.89099018 1356 P35579 MYH9 Myosin-9 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 66.661 66.114 3 6.7043E-10 75324 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 93.51 77.626 484330000 195350000 0 0 4603700 4537300 42969000 6021600 13361000 20817000 19305000 22421000 34968000 15287000 22662000 82035000 40082 1356 35800 334291;334292;334293;334294;334295;334296;334297;334298;334299;334300;334301;334302;334303 264936;264937;264938;264939;264940;264941;264942;264943;264944;264945;264946;264947 264941 12 PLLQVSRQEEEMMAK 2 Oxidation (M) 1819.8808 0.88081943 1356 P35579 MYH9 Myosin-9 yes yes 0 2 1 By MS/MS By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS 7.54 3.69 4 9 2 1 1 1 1 1 1 1 1 1 1 1 43.278 41.545 2;3 0.00026127 44923 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.659 72.115 184820000 80874000 13474000 3592400 0 0 16101000 7515000 4711600 11495000 9049000 0 13711000 10152000 5142700 9004300 40083 1356 35800 334304;334305;334306;334307;334308;334309;334310;334311;334312;334313;334314;334315;334316 264948;264949;264950 264948 2088;2089 3 PLLSALDFEK Unmodified 1131.6176 0.61757574 4457 Q9H8Y5 ANKZF1 Ankyrin repeat and zinc finger domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching 8 3.46 2 6 1 1 1 1 1 1 1 1 83.876 83.061 2 0.0034855 104322 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.692 71.263 25124000 0 14509000 2311900 0 0 1761400 519110 0 1111800 1303400 1474200 0 2133300 0 0 40084 4457 35801 334317;334318;334319;334320;334321;334322;334323;334324 264951;264952 264951 2 PLLSSLSANK Unmodified 1028.5866 0.58660996 4596 Q9NRA8 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 52.822 53.104 2 0.0015597 60063 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 93.267 35.073 101010000 0 0 0 0 9288500 0 0 0 18579000 0 20464000 17433000 12836000 0 22408000 40085 4596 35802 334325;334326;334327;334328;334329;334330;334331;334332;334333;334334 264953;264954;264955;264956;264957;264958;264959;264960;264961;264962;264963 264957 11 PLLSTFSQVPGSENEK Unmodified 1731.8679 0.86792978 3839 Q96FV9 THOC1 THO complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.71 2.89 3 1 20 1 2 1 2 2 1 2 2 1 2 1 1 2 2 2 75.326 74.574 2;3 0 93119 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 369.63 308.66 822440000 37010000 314120000 9411600 20373000 26321000 28852000 37751000 27696000 21841000 47490000 37148000 48741000 51567000 52857000 61262000 40086 3839 35803 334335;334336;334337;334338;334339;334340;334341;334342;334343;334344;334345;334346;334347;334348;334349;334350;334351;334352;334353;334354;334355;334356;334357;334358 264964;264965;264966;264967;264968;264969;264970;264971;264972;264973;264974;264975;264976;264977;264978;264979;264980;264981;264982 264968 19 PLLSVNK Unmodified 769.46979 0.46978929 3576 Q8WWM7 ATXN2L Ataxin-2-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38.42 37.405 2 0.01434 51570 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 120.9 42.954 547510000 149510000 70163000 22844000 18940000 18527000 21285000 23657000 20288000 22726000 33796000 31823000 0 31893000 27666000 54392000 40087 3576 35804 334359;334360;334361;334362;334363;334364;334365;334366;334367;334368;334369;334370;334371;334372 264983;264984;264985;264986;264987 264985 4 PLLVEPEGLEK Unmodified 1222.6809 0.68090428 740 P01023;CON__ENSEMBL:ENSBTAP00000024146 A2M Alpha-2-macroglobulin yes no 0 0 0 By MS/MS By MS/MS By MS/MS 6.25 3.77 1 1 2 2 1 1 74.216 72.014 2 0.00017598 82500 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 108.15 99.284 49320000 0 23418000 0 6375700 0 0 0 19526000 0 0 0 0 0 0 0 40088 740 35805 334373;334374;334375;334376 264988;264989;264990;264991 264989 3 PLLVSTLGEK Unmodified 1055.6227 0.62266112 1662 P51608 MECP2 Methyl-CpG-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 72.173 67.809 2 0.0032899 86260 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.331 68.449 22219000 0 17573000 4645400 0 0 0 0 0 0 0 0 0 0 0 0 40089 1662 35806 334377;334378;334379 264992;264993;264994;264995 264992 4 PLMGVIYVPLTDK Oxidation (M) 1460.7949 0.79488818 1133 P22061 PCMT1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 83.484 82.917 2 2.4624E-25 96458 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 158.79 149.61 182720000 43836000 0 0 3827000 4087000 13005000 7398800 6895400 6874400 16763000 14648000 17477000 8966100 13215000 25729000 40090 1133 35807 334380;334381;334382;334383;334384;334385;334386;334387;334388;334389;334390;334391;334392 264996;264997;264998;264999;265000;265001;265002;265003;265004;265005;265006;265007;265008;265009 265007 1620 14 PLMGVIYVPLTDK Unmodified 1444.8 0.79997356 1133 P22061 PCMT1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 91 89.93 2 1.0502E-21 113414 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 146.11 107.54 73106000 51235000 0 4759800 0 0 1891800 0 1387400 941300 0 1878600 2308000 957770 0 7745600 40091 1133 35807 334393;334394;334395;334396;334397;334398;334399;334400;334401 265010;265011;265012;265013;265014;265015;265016;265017 265012 8 PLMLIAPKPQDK Oxidation (M) 1365.769 0.76900778 4371 Q9H2P0 ADNP Activity-dependent neuroprotector homeobox protein yes yes 0 1 1 By MS/MS 10 0 1 1 51.948 52.368 3 0.022088 59086 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 43.549 39.672 6400200 0 0 0 0 0 0 0 0 0 0 6400200 0 0 0 0 40092 4371 35808 334402 265018 265018 0 PLMLNPR Oxidation (M) 855.46366 0.46365805 1154 P23368 ME2 NAD-dependent malic enzyme, mitochondrial yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 36.575 36.734 2 0.031542 39998 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 65.263 13.032 131320000 0 0 0 0 9642500 15904000 10252000 11428000 18910000 15472000 19571000 30140000 0 0 0 40093 1154 35809 334403;334404;334405;334406;334407;334408;334409;334410 265019 265019 1 PLMTELLK Oxidation (M) 959.53615 0.5361543 3692;215 Q92973;O14787 TNPO1;TNPO2 Transportin-1;Transportin-2 no no 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 55.389 53.971 2 0.0032101 60747 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 109.01 48.364 551240000 67143000 119380000 54629000 17526000 17624000 41593000 16497000 24805000 15858000 34201000 32217000 35910000 33267000 0 40589000 40094 3692;215 35810 334411;334412;334413;334414;334415;334416;334417;334418;334419;334420;334421;334422;334423;334424;334425;334426 265020;265021;265022;265023;265024;265025;265026;265027;265028;265029;265030;265031;265032;265033;265034;265035;265036;265037;265038;265039 265020 292 20 PLMTELLK Unmodified 943.54124 0.54123967 3692;215 Q92973;O14787 TNPO1;TNPO2 Transportin-1;Transportin-2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 77.166 76.508 2 0.0051142 87742 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 108.09 71.067 1181900000 0 354820000 102350000 30963000 30162000 79909000 38879000 64953000 34487000 65582000 58905000 58304000 41838000 66644000 154120000 40095 3692;215 35810 334427;334428;334429;334430;334431;334432;334433;334434;334435;334436;334437;334438;334439;334440;334441;334442 265040;265041;265042;265043;265044;265045;265046;265047;265048;265049;265050;265051;265052;265053;265054;265055 265053 16 PLNAITCISEHSK Unmodified 1468.7344 0.73441319 2829 Q5VYS8 ZCCHC6 Terminal uridylyltransferase 7 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 62.208 55.136 3 0.0026464 71348 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 44.436 30.5 40473000 19524000 20950000 0 0 0 0 0 0 0 0 0 0 0 0 0 40096 2829 35811 334443;334444 265056;265057 265056 2 PLNLEEK Unmodified 841.45453 0.45453316 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 30.159 29.484 2 0.012142 36992 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 127.12 36.132 4767700000 0 1465600000 23487000 175230000 169480000 252270000 250450000 246990000 229660000 296870000 298150000 406850000 307950000 273230000 371440000 40097 2102 35812 334445;334446;334447;334448;334449;334450;334451;334452;334453;334454;334455;334456;334457;334458;334459 265058;265059;265060;265061;265062;265063;265064;265065;265066;265067;265068;265069;265070;265071;265072;265073;265074;265075;265076;265077 265071 18 PLNTEGVMK Oxidation (M) 1003.5008 0.50083142 727 P00488 F13A1 Coagulation factor XIII A chain yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 34.054 34.364 2 0.0054729 36404 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 69.998 22.424 55759000 0 0 0 0 0 0 0 0 0 0 0 0 0 55759000 0 40098 727 35813 334460;334461 265078;265079 265078 876 2 PLNTTPNATK Unmodified 1055.5611 0.56112349 3955 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 16.288 16.135 2 0.00059192 15755 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 131.62 54.77 407040000 0 44267000 0 16187000 12562000 28032000 27282000 17771000 36332000 33440000 35762000 42983000 52497000 59923000 0 40099 3955 35814 334462;334463;334464;334465;334466;334467;334468;334469;334470;334471;334472;334473 265080;265081;265082;265083;265084;265085;265086;265087;265088;265089;265090;265091 265088 12 PLNVSNNALVWTASDYADGEAK Unmodified 2334.1128 0.11280451 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 87.329 83.692 3 9.0278E-07 103856 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 43.64 39.688 53343000 0 52187000 1156200 0 0 0 0 0 0 0 0 0 0 0 0 40100 1601 35815 334474;334475 265092 265092 1 PLNVTVIR Unmodified 910.56 0.56000128 131 O00233 PSMD9 26S proteasome non-ATPase regulatory subunit 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 56.835 56.952 2 0.01524 65656 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 69.198 30.362 180910000 0 0 0 10684000 11629000 9986000 10409000 9718600 7718200 11401000 25798000 35207000 8394800 0 39962000 40101 131 35816 334476;334477;334478;334479;334480;334481;334482;334483;334484;334485;334486 265093;265094;265095;265096;265097;265098;265099;265100 265100 6 PLNYEENR Unmodified 1033.4829 0.48287317 2417 Q14574 DSC3 Desmocollin-3 yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 21.428 21.916 2 0.0067419 22468 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 98.299 64.503 24661000 0 0 0 0 0 0 0 16466000 0 0 0 7025600 0 0 1169600 40102 2417 35817 334487;334488;334489 265101;265102 265101 2 PLNYEVNR Unmodified 1003.5087 0.50869399 2160 Q08554 DSC1 Desmocollin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 34.259 34.17 2 0.0063839 38141 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 101.33 85.946 639240000 0 0 0 163460000 72210000 61558000 45301000 262570000 34130000 0 0 0 0 0 0 40103 2160 35818 334490;334491;334492;334493;334494;334495;334496;334497;334498 265103;265104;265105;265106;265107;265108;265109;265110;265111;265112;265113;265114 265113 12 PLPAPLDGQR Unmodified 1062.5822 0.58219329 3579 Q8WWY3 PRPF31 U4/U6 small nuclear ribonucleoprotein Prp31 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 53.209 53.236 2 0.010028 59953 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 56.729 21.285 302720000 0 0 0 28197000 29788000 0 42643000 31099000 39521000 0 0 66974000 64497000 0 0 40104 3579 35819 334499;334500;334501;334502;334503;334504;334505 265115;265116;265117 265116 2 PLPAPLDGQRK Unmodified 1190.6772 0.6771563 3579 Q8WWY3 PRPF31 U4/U6 small nuclear ribonucleoprotein Prp31 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.12 3 13 1 1 1 1 1 1 1 1 1 1 1 1 1 3 42.588 41.495 3 0.00068599 59008 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.056 57.489 321530000 34758000 12758000 8431600 17596000 13599000 0 22733000 19106000 16625000 24619000 36353000 27612000 26190000 21341000 39812000 40105 3579 35820 334506;334507;334508;334509;334510;334511;334512;334513;334514;334515;334516;334517;334518;334519;334520;334521 265118;265119;265120;265121;265122;265123;265124;265125;265126;265127;265128;265129;265130;265131;265132;265133;265134 265126 16 PLPDAVLEELQK Unmodified 1350.7395 0.73948179 2947 Q6PGP7 TTC37 Tetratricopeptide repeat protein 37 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 85.912 85.214 2 0.0035217 98645 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 75.387 59.506 233520000 0 200800000 0 0 0 5130400 1798500 2894300 0 3428500 2816600 4595300 0 3123000 8931400 40106 2947 35821 334522;334523;334524;334525;334526;334527;334528;334529;334530;334531 265135;265136;265137;265138;265139;265140;265141 265135 7 PLPDHVSIVEPK Unmodified 1329.7293 0.72925145 1156 P23396 RPS3 40S ribosomal protein S3 yes yes 0 0 0 By MS/MS 2 0 1 1 63 59.24 3 0.00051835 73646 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 75.89 60.948 15980000 0 0 15980000 0 0 0 0 0 0 0 0 0 0 0 0 40107 1156 35822 334532 265142 265142 1 PLPDHVSIVEPKDEILPTTPISEQK Unmodified 2781.48 0.48002621 1156 P23396 RPS3 40S ribosomal protein S3 yes yes 0 0 1 By MS/MS 2 0 1 1 82.887 80.425 4 0.0053521 97450 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 31.775 28.997 4745300 0 0 4745300 0 0 0 0 0 0 0 0 0 0 0 0 40108 1156 35823 334533 265143 265143 1 PLPDSEEEGHDNQEAHQK Unmodified 2058.8879 0.88788995 2551 Q15596 NCOA2 Nuclear receptor coactivator 2 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 15.07 15.262 4 0.0049213 13990 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 32.302 22.552 48650000 0 0 0 7334900 2038600 0 0 0 0 0 8811400 0 10211000 6835900 13418000 40109 2551 35824 334534;334535;334536;334537;334538;334539 265144;265145;265146 265145 3 PLPEPSEQEGESVK Unmodified 1524.7308 0.7307676 3781;2690 Q96CP2;Q4VC44 FLYWCH2;FLYWCH1 FLYWCH family member 2;FLYWCH-type zinc finger-containing protein 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.3 1 4 2 24 2 5 2 2 2 2 2 2 2 2 2 2 2 2 43.32 42.74 2;3 4.3071E-24 50187 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.161 92.432 5170500000 68864000 762900000 0 301370000 283220000 329540000 365630000 303930000 255540000 349150000 466780000 487750000 393270000 258480000 544000000 40110 3781;2690 35825 334540;334541;334542;334543;334544;334545;334546;334547;334548;334549;334550;334551;334552;334553;334554;334555;334556;334557;334558;334559;334560;334561;334562;334563;334564;334565;334566;334567;334568;334569;334570 265147;265148;265149;265150;265151;265152;265153;265154;265155;265156;265157;265158;265159;265160;265161;265162;265163;265164;265165;265166;265167;265168;265169;265170;265171;265172 265153 19 PLPEVTDEYK Unmodified 1189.5867 0.58666954 811 P05455 SSB Lupus La protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 2 1 1 1 53 53.178 2 0.0021904 59685 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 85.731 70.069 242500000 0 0 0 19025000 0 0 0 0 24974000 24488000 17120000 50754000 37389000 68754000 0 40111 811 35826 334571;334572;334573;334574;334575;334576;334577;334578;334579 265173;265174;265175;265176;265177;265178;265179;265180;265181;265182;265183 265180 11 PLPGETLEK Unmodified 982.53351 0.53351176 5201 Q9Y4G6 TLN2 Talin-2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 42.848 38.441 2 0.032081 49810 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.465 16.71 80605000 0 78355000 2249400 0 0 0 0 0 0 0 0 0 0 0 0 40112 5201 35827 334580;334581 265184 265184 1 PLPGETMEK Unmodified 1000.4899 0.48993238 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS 2 0 1 1 36 31.153 2 0.017714 40687 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.516 59.785 108510000 0 108510000 0 0 0 0 0 0 0 0 0 0 0 0 0 40113 5187 35828 334582 265185 265185 1 PLPGITVGDIGPK Unmodified 1262.7234 0.72343779 2494 Q15067 ACOX1 Peroxisomal acyl-coenzyme A oxidase 1 yes yes 0 0 0 By MS/MS 10 0 1 1 79.006 78.554 2 0.0034376 91115 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 66.595 55.105 11677000 0 0 0 11677000 0 0 0 0 0 0 0 0 0 0 0 40114 2494 35829 334583 265186 265186 1 PLPHQNVTNHVGK Unmodified 1439.7633 0.76334555 3107 Q7Z5K2 WAPAL Wings apart-like protein homolog yes yes 0 0 0 By MS/MS 2 0 1 1 28.834 23.316 3 1.3328E-05 32721 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.169 66.033 67300000 67300000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40115 3107 35830 334584 265187 265187 1 PLPLSPEEGYVSAK Unmodified 1485.7715 0.7715102 568 O75970 MPDZ Multiple PDZ domain protein yes yes 0 0 0 By MS/MS By MS/MS 5 3.56 1 1 1 2 1 74.623 70.317 2 0.0014964 88008 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.85 93.628 110550000 0 110550000 0 0 0 0 0 0 0 0 0 0 0 0 0 40116 568 35831 334585;334586;334587 265188;265189 265188 2 PLPPAAIESPAVAAPAYSR Unmodified 1877.0047 0.0046980325 786 P04792 HSPB1 Heat shock protein beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 77.281 77.358 3 1.1814E-12 88813 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.129 64.404 46030000 0 0 0 4169100 0 0 6249600 5258700 0 0 7465800 0 0 5837200 17050000 40117 786 35832 334588;334589;334590;334591;334592;334593 265190;265191;265192;265193;265194 265191 5 PLPPAPAPDEYLVSPITGEK Unmodified 2090.0936 0.093572619 2539 Q15459 SF3A1 Splicing factor 3A subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.26 3.23 5 2 24 5 2 2 2 2 2 2 2 2 2 2 2 2 2 86.551 85.765 2;3 3.6896E-47 98867 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 115.91 111.9 4189400000 0 3302200000 10446000 17431000 54811000 58123000 52409000 61732000 58354000 91103000 79808000 101830000 54065000 83162000 163900000 40118 2539 35833 334594;334595;334596;334597;334598;334599;334600;334601;334602;334603;334604;334605;334606;334607;334608;334609;334610;334611;334612;334613;334614;334615;334616;334617;334618;334619;334620;334621;334622;334623;334624 265195;265196;265197;265198;265199;265200;265201;265202;265203;265204;265205;265206;265207;265208;265209;265210;265211;265212;265213;265214;265215;265216;265217;265218;265219;265220;265221;265222;265223;265224;265225;265226;265227;265228;265229;265230;265231;265232;265233 265209 35 PLPPIQVASLR Unmodified 1189.7183 0.71829284 3915 Q96L91 EP400 E1A-binding protein p400 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 78.893 78.936 2 0.048209 91046 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 35.511 20.36 44373000 0 0 0 1937900 3204300 3156900 3134200 3944200 0 6083200 3443000 7946400 0 4590200 6933100 40119 3915 35834 334625;334626;334627;334628;334629;334630;334631;334632;334633;334634 265234 265234 1 PLPPPPTQTEEEEDPAMKPQSVLTR Unmodified 2786.3797 0.37966024 2136 Q07157 TJP1 Tight junction protein ZO-1 yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 72.193 72.469 3 0.0022242 83015 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 25.221 12.667 13421000 0 0 0 0 0 0 4806500 0 0 0 0 0 0 0 8614800 40120 2136 35835 334635;334636 265235 265235 1 PLPPPPTQTEEEEDPAMKPQSVLTR Oxidation (M) 2802.3746 0.37457486 2136 Q07157 TJP1 Tight junction protein ZO-1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 65.052 65.112 3 7.5407E-07 74535 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 44.258 34.409 47612000 0 0 0 9738300 0 0 0 0 0 0 12669000 12916000 12288000 0 0 40121 2136 35835 334637;334638;334639;334640 265236;265237 265236 3439 2 PLPPSERLEQELFSGGNTGINFEK Unmodified 2658.3289 0.3289453 170 O00571;O15523 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 0 0 1 By MS/MS 2 0 1 1 93.587 85.457 3 0.00015861 110623 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.681 48.258 44058000 44058000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40122 170 35836 334641 265238;265239 265238 2 PLPQLEPQAEVFTK Unmodified 1595.8559 0.85590853 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 79.765 79.853 2 0.00020909 92276 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 80.979 63.115 40867000 0 0 0 0 2179700 6296300 2854600 3563300 4753700 4622900 5791000 6954100 3851300 0 0 40123 2291 35837 334642;334643;334644;334645;334646;334647;334648;334649;334650 265240;265241;265242;265243;265244;265245;265246 265240 7 PLPQQPPAPANQDQNSSQNTR Unmodified 2287.0941 0.094134755 165 O00512 BCL9 B-cell CLL/lymphoma 9 protein yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 38.511 38.908 3 0.00012878 42383 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.578 43.242 41337000 0 0 0 0 0 0 3569900 0 3154100 0 4871400 5432500 4976900 5603900 13729000 40124 165 35838 334651;334652;334653;334654;334655;334656;334657 265247;265248;265249;265250 265247 3 PLPQTPHLEEDLK Unmodified 1515.7933 0.79330827 917 P10244 MYBL2 Myb-related protein B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 63.385 62.637 3 0.0020006 71265 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 55.196 37.602 108010000 0 32076000 8605900 0 0 10099000 0 4060300 6167800 9719700 7245600 9107000 0 7101000 13827000 40125 917 35839 334658;334659;334660;334661;334662;334663;334664;334665;334666;334667 265251;265252;265253;265254;265255;265256 265252 5 PLPSFCPPR Unmodified 1069.5379 0.53788563 2781 Q5T749 KPRP Keratinocyte proline-rich protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.804 65.89 2 0.0036202 76448 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 95.352 88.713 127100000 0 0 0 43395000 3748800 7985900 10667000 4976500 4506400 6277500 7382600 13464000 14089000 6044000 4558400 40126 2781 35840 334668;334669;334670;334671;334672;334673;334674;334675;334676;334677;334678;334679 265257;265258;265259;265260;265261;265262;265263;265264;265265 265264 9 PLPSVPEEK Unmodified 994.53351 0.53351176 2248 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.12 2.32 1 7 1 1 1 1 1 1 1 1 44.744 44.48 2 0.0052256 49684 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 79.713 57.09 160560000 0 20911000 0 0 0 0 8827400 0 0 17443000 25708000 23741000 13835000 21151000 28946000 40127 2248 35841 334680;334681;334682;334683;334684;334685;334686;334687 265266;265267;265268;265269;265270;265271 265271 6 PLPTVPGGLSPVQR Unmodified 1416.8089 0.80889876 4645 Q9NUJ3 TCP11L1 T-complex protein 11-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 75.524 75.56 2 0.0013411 87283 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 61.353 51.4 41955000 0 0 0 1864200 2144100 5170700 2391400 3390200 3607600 4091200 4066700 5774000 3694600 5760300 0 40128 4645 35842 334688;334689;334690;334691;334692;334693;334694;334695;334696;334697;334698 265272;265273;265274;265275;265276;265277;265278;265279 265274 8 PLPVALQTR Unmodified 993.59712 0.59711507 435 O60828 PQBP1 Polyglutamine-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.041 58.159 2 0.0054364 65420 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 77.732 38.94 624540000 0 0 0 32606000 38894000 35854000 55336000 51115000 42456000 49192000 70533000 85191000 39658000 45854000 77850000 40129 435 35843 334699;334700;334701;334702;334703;334704;334705;334706;334707;334708;334709;334710 265280;265281;265282;265283;265284;265285 265285 6 PLPVALQTRLAK Unmodified 1305.8133 0.81325585 435 O60828 PQBP1 Polyglutamine-binding protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 76.581 68.451 3 0.018439 90295 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.062 35.143 8819100 8819100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40130 435 35844 334711 265286 265286 1 PLPVNPTDPAVTGPDIFAK Unmodified 1948.0306 0.030578432 4386 Q9H3S7 PTPN23 Tyrosine-protein phosphatase non-receptor type 23 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.17 2.36 1 1 16 2 2 2 2 1 2 2 1 1 1 1 1 86.375 86.007 2;3 5.2264E-13 106464 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.5 85.843 225430000 0 144720000 0 0 5405100 10872000 5825500 3742300 9986100 13389000 4781600 6649700 4371400 4585500 11100000 40131 4386 35845 334712;334713;334714;334715;334716;334717;334718;334719;334720;334721;334722;334723;334724;334725;334726;334727;334728;334729 265287;265288;265289;265290;265291;265292;265293;265294;265295;265296;265297;265298;265299;265300;265301;265302 265292 15 PLPVPPELAPFVGR Unmodified 1487.85 0.85003529 5070 Q9UQB8 BAIAP2 Brain-specific angiogenesis inhibitor 1-associated protein 2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 94.597 94.73 2 0.001922 110017 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 53.683 36.657 3346600 0 0 0 0 0 0 0 0 0 1329500 0 0 0 0 2017100 40132 5070 35846 334730;334731 265303;265304 265303 2 PLQDPEVQK Unmodified 1052.5502 0.55022446 252 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 25.21 25.409 2 0.0051431 27074 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 82.279 55.317 38680000 0 0 0 0 3636900 4585900 3970100 5674500 3124900 0 3803000 0 5264200 2694000 5926900 40133 252 35847 334732;334733;334734;334735;334736;334737;334738;334739;334740;334741 265305;265306;265307;265308;265309;265310;265311;265312;265313;265314 265310 9 PLQDQNELFGK Unmodified 1287.6459 0.64591575 2202 Q12874 SF3A3 Splicing factor 3A subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 55.464 54.145 2 8.8766E-28 61194 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 173.24 137.79 1256300000 24503000 716760000 7348800 21566000 27096000 40027000 32916000 27907000 34599000 66599000 51681000 59301000 43573000 36243000 66235000 40134 2202 35848 334742;334743;334744;334745;334746;334747;334748;334749;334750;334751;334752;334753;334754;334755;334756;334757 265315;265316;265317;265318;265319;265320;265321;265322;265323;265324;265325;265326;265327;265328;265329;265330;265331;265332;265333;265334;265335;265336;265337;265338;265339;265340;265341;265342;265343;265344 265330 29 PLQEQLSVNQIK Unmodified 1395.7722 0.7721789 1389 P37275 ZEB1 Zinc finger E-box-binding homeobox 1 yes yes 0 0 0 By MS/MS 2 0 1 1 65.701 59.783 2 0.014581 76522 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.849 48.91 14833000 0 14833000 0 0 0 0 0 0 0 0 0 0 0 0 0 40135 1389 35849 334758 265345 265345 1 PLQGDGYSGAKPIPGGQTIGPR Unmodified 2165.1229 0.12291569 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 56.419 56.493 3 0.0040315 64051 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 29.118 20.186 75353000 0 0 0 4343200 3329800 0 6911600 6316400 0 10945000 10676000 0 11281000 7790300 13759000 40136 1601 35850 334759;334760;334761;334762;334763;334764;334765;334766;334767 265346;265347;265348;265349;265350 265348 5 PLQIFHDPPLPASDSK Unmodified 1760.9097 0.90973501 387 O60244 MED14 Mediator of RNA polymerase II transcription subunit 14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.57 3.96 3 4 1 1 1 1 1 1 1 79.118 75.963 3 2.1121E-05 97539 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.784 59.728 106860000 48827000 33180000 4144200 0 7101700 13606000 0 0 0 0 0 0 0 0 0 40137 387 35851 334768;334769;334770;334771;334772;334773;334774 265351;265352;265353;265354;265355;265356;265357 265354 6 PLQIWDK Unmodified 898.49125 0.49125301 5272 Q9Y6A4 CFAP20 Cilia- and flagella-associated protein 20 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 59.888 58.273 2 0.024359 75879 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.71 62.952 228680000 101280000 41823000 24927000 4776800 4386700 0 4970200 9277100 0 7310100 0 12813000 6889800 10226000 0 40138 5272 35852 334775;334776;334777;334778;334779;334780;334781;334782;334783;334784;334785 265358;265359;265360;265361 265358 4 PLQPLPNTAHSISDRLPEEK Unmodified 2241.1753 0.17534519 4411 Q9H633 RPP21 Ribonuclease P protein subunit p21 yes yes 0 0 1 By MS/MS 2 0 1 1 74.333 66.202 4 3.9369E-47 87642 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 130 120.48 90786000 90786000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40139 4411 35853 334786 265362;265363 265363 2 PLQQHLTTK Unmodified 1064.5978 0.59784335 2649 Q2KHR3 QSER1 Glutamine and serine-rich protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 21.578 17.773 2 0.0016381 25643 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 134.48 94.815 26664000 23768000 0 2895300 0 0 0 0 0 0 0 0 0 0 0 0 40140 2649 35854 334787;334788 265364;265365 265364 2 PLQQLEVPLISR Unmodified 1391.8136 0.81364979 2624 Q16651 PRSS8 Prostasin;Prostasin light chain;Prostasin heavy chain yes yes 0 0 0 By MS/MS 10 0 1 1 84.343 83.959 2 0.011193 97579 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 59.542 55.525 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40141 2624 35855 334789 265366 265366 1 PLQYQSTVASGTVAR Unmodified 1576.8209 0.82092001 2345 Q13823 GNL2 Nucleolar GTP-binding protein 2 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching 10 0 5 1 1 1 1 1 48.902 49.139 2 4.7524E-27 55574 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 164.04 119.17 70191000 0 0 0 0 0 10785000 12135000 7580200 0 14425000 0 25267000 0 0 0 40142 2345 35856 334790;334791;334792;334793;334794 265367;265368 265368 1 PLRAEGTNFR Unmodified 1159.6098 0.60980502 3549 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein yes yes 0 0 1 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 26.286 26.478 3 0.026516 28278 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 47.559 33.352 333700000 0 0 0 22985000 19970000 0 32670000 24741000 20100000 61307000 0 43230000 33457000 31582000 43655000 40143 3549 35857 334795;334796;334797;334798;334799;334800;334801;334802;334803;334804 265369;265370 265370 0 PLRIIGDPYK Unmodified 1170.6761 0.67609367 3690 Q92945 KHSRP Far upstream element-binding protein 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 67.316 60.21 3 0.005725 80043 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.434 57.29 176300000 157230000 19076000 0 0 0 0 0 0 0 0 0 0 0 0 0 40144 3690 35858 334805;334806 265371;265372 265371 2 PLRITGDPYK Unmodified 1158.6397 0.63970816 3737 Q96AE4 FUBP1 Far upstream element-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By matching 2 0 5 3 1 1 50.098 43.404 2;3 0.016382 60076 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.347 42.203 2198900000 2088600000 108850000 1414900 0 0 0 0 0 0 0 0 0 0 0 0 40145 3737 35859 334807;334808;334809;334810;334811 265373;265374;265375 265374 1 PLRLPLQDVYK Unmodified 1340.7816 0.78162138 1960 P68104;Q5VTE0;Q05639 EEF1A1;EEF1A1P5;EEF1A2 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 2 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.09 11 2 55 6 5 2 5 5 5 6 6 4 5 4 5 4 3 3 78.196 77.695 2;3 2.7509E-15 87579 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 157.66 135.02 57671000000 1351500000 800890000 4298900 1244900000 1437800000 5418400000 2956100000 4431600000 4495300000 4954600000 4330500000 5637100000 4092600000 4152100000 12364000000 40146 1960 35860 334812;334813;334814;334815;334816;334817;334818;334819;334820;334821;334822;334823;334824;334825;334826;334827;334828;334829;334830;334831;334832;334833;334834;334835;334836;334837;334838;334839;334840;334841;334842;334843;334844;334845;334846;334847;334848;334849;334850;334851;334852;334853;334854;334855;334856;334857;334858;334859;334860;334861;334862;334863;334864;334865;334866;334867;334868;334869;334870;334871;334872;334873;334874;334875;334876;334877;334878;334879 265376;265377;265378;265379;265380;265381;265382;265383;265384;265385;265386;265387;265388;265389;265390;265391;265392;265393;265394;265395;265396;265397;265398;265399;265400;265401;265402;265403;265404;265405;265406;265407;265408;265409;265410;265411;265412;265413;265414;265415;265416;265417;265418;265419;265420;265421;265422;265423;265424;265425;265426;265427;265428;265429;265430;265431;265432;265433;265434;265435;265436;265437;265438;265439;265440;265441;265442;265443;265444;265445;265446;265447;265448;265449;265450;265451;265452;265453;265454;265455;265456;265457;265458;265459;265460;265461;265462;265463;265464;265465;265466;265467;265468;265469;265470;265471;265472;265473 265454 88 PLSDAQGK Unmodified 814.41848 0.418482 3935 Q96NB3 ZNF830 Zinc finger protein 830 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 6.7545 3.4538 2 0.024403 5591 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.32 23.868 73369000 0 73369000 0 0 0 0 0 0 0 0 0 0 0 0 0 40147 3935 35861 334880;334881 265474 265474 1 PLSDGPPDPK Unmodified 1021.508 0.50802529 5277 Q9Y6D6 ARFGEF1 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 29.174 24.828 2 0.043977 32467 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 53.493 32.193 59412000 0 59412000 0 0 0 0 0 0 0 0 0 0 0 0 0 40148 5277 35862 334882;334883 265475 265475 1 PLSDPAPF Unmodified 842.41742 0.41741937 325 O43399 TPD52L2 Tumor protein D54 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 1 2 2 2 2 2 2 2 2 2 2 2 70.27 70.375 1;2 0.0073262 81064 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 160.69 131.35 456220000 0 0 0 14739000 20081000 40820000 25430000 22631000 42709000 38621000 47502000 69113000 38889000 36442000 59242000 40149 325 35863 334884;334885;334886;334887;334888;334889;334890;334891;334892;334893;334894;334895;334896;334897;334898;334899;334900;334901;334902;334903;334904;334905;334906 265476;265477;265478;265479;265480;265481;265482;265483;265484;265485 265477 2 PLSENELLELFEK Unmodified 1559.8083 0.80828964 4630 Q9NSV4 DIAPH3 Protein diaphanous homolog 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 3 1 98.068 93.391 2 3.2628E-65 116439 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 212.9 190.26 80251000 28712000 49642000 1896900 0 0 0 0 0 0 0 0 0 0 0 0 40150 4630 35864 334907;334908;334909;334910;334911 265486;265487;265488;265489 265488 4 PLSGNEQLK Unmodified 984.52401 0.52400971 2063 Q01804 OTUD4 OTU domain-containing protein 4 yes yes 0 0 0 By MS/MS 2 0 1 1 24.222 20.094 2 0.018209 26565 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.923 34.856 10674000 0 10674000 0 0 0 0 0 0 0 0 0 0 0 0 0 40151 2063 35865 334912 265490 265490 1 PLSGNSNSSGSESFK Unmodified 1496.6743 0.67431535 4030 Q99590 SCAF11 Protein SCAF11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 23.493 23.354 2 4.8713E-35 23188 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 152.85 137.88 105140000 0 11807000 0 4272200 5067300 7615900 4892000 4593900 6149500 8104100 7260300 11368000 10796000 9850900 13365000 40152 4030 35866 334913;334914;334915;334916;334917;334918;334919;334920;334921;334922;334923;334924;334925 265491;265492;265493;265494;265495;265496;265497;265498;265499;265500;265501;265502 265498 12 PLSHFVSEPGPQK Unmodified 1421.7303 0.73031409 2301 Q13495 MAMLD1 Mastermind-like domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 41.505 41.068 3 0.00031489 58566 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 91.784 74.842 264820000 44064000 0 0 0 13813000 16561000 16663000 16801000 13623000 23271000 22968000 27346000 28071000 16051000 25585000 40153 2301 35867 334926;334927;334928;334929;334930;334931;334932;334933;334934;334935;334936;334937 265503;265504;265505;265506 265504 1 PLSIEEIEVAPPK Unmodified 1420.7813 0.7813466 955 P11766 ADH5 Alcohol dehydrogenase class-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 5.33 3.82 7 2 6 2 5 2 1 1 1 1 1 1 82.034 79.805 2;3 9.333E-42 92272 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 175.49 150.64 3457700000 141150000 3090800000 77259000 0 0 1841800 0 0 0 0 21046000 20874000 1511000 15653000 87554000 40154 955 35868 334938;334939;334940;334941;334942;334943;334944;334945;334946;334947;334948;334949;334950;334951;334952 265507;265508;265509;265510;265511;265512;265513;265514;265515;265516;265517;265518 265512 10 PLSLFDSK Unmodified 905.48583 0.48583328 4370 Q9H2M9 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 64.52 63.856 2 0.0025405 79482 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 121.31 55.51 209990000 0 76647000 22788000 6658700 5725600 10584000 7694300 7851100 6548500 13879000 12427000 9490500 12195000 0 17505000 40155 4370 35869 334953;334954;334955;334956;334957;334958;334959;334960;334961;334962;334963;334964;334965 265519;265520;265521;265522;265523;265524 265522 6 PLSPDSRASSLSESSPPK Unmodified 1840.9167 0.91667089 4893 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 42.75 38.338 3 3.7478E-05 49857 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 54.368 37.625 43937000 0 24335000 19602000 0 0 0 0 0 0 0 0 0 0 0 0 40156 4893 35870 334966;334967 265525;265526 265525 2 PLSQDPQDRGPATAEVPYPDDLVGFK Unmodified 2811.3715 0.37153839 2540 Q15477 SKIV2L Helicase SKI2W yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 84.844 82.006 3 2.4703E-18 97996 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 81.949 72.928 9803600 0 6429500 3374100 0 0 0 0 0 0 0 0 0 0 0 0 40157 2540 35871 334968;334969 265527;265528;265529 265527 3 PLSQEELQR Unmodified 1098.5669 0.56693715 675 O95628 CNOT4 CCR4-NOT transcription complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 29.959 30.197 2 0.00069849 32665 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 144.38 44.187 80623000 0 0 0 0 3117700 6225700 4617600 3110200 6376400 7562400 8426600 5790900 8821600 10114000 16460000 40158 675 35872 334970;334971;334972;334973;334974;334975;334976;334977;334978;334979;334980 265530;265531;265532;265533;265534;265535;265536;265537;265538 265531 9 PLSSGGEEEEK Unmodified 1160.5197 0.51971219 3308 Q8N163 CCAR2 Cell cycle and apoptosis regulator protein 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9.714 9.318 2 5.6985E-16 7438 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 159.79 133.69 192550000 5693000 43548000 0 8161100 4414300 14603000 7846800 5651100 8737200 10474000 19923000 17349000 12122000 11047000 22981000 40159 3308 35873 334981;334982;334983;334984;334985;334986;334987;334988;334989;334990;334991;334992;334993;334994 265539;265540;265541;265542;265543;265544;265545;265546;265547;265548 265541 9 PLSSGGEEEEKPR Unmodified 1413.6736 0.67358707 3308 Q8N163 CCAR2 Cell cycle and apoptosis regulator protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.388 12.538 3 0.00050889 11651 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 56.956 51.74 61325000 0 0 0 3980100 4292800 3436900 3713400 4566400 2298900 9028000 3422800 9081100 5499400 4898500 7106800 40160 3308 35874 334995;334996;334997;334998;334999;335000;335001;335002;335003;335004;335005;335006 265549;265550;265551;265552;265553;265554;265555;265556;265557;265558;265559;265560 265551 11 PLSSLTPLIMAAK Oxidation (M) 1356.7687 0.76867343 2248 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 82.47 81.902 2 3.5067E-13 94519 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 135.86 129.56 192830000 21893000 0 0 5275800 6785200 20582000 10458000 9334100 7086000 21018000 16089000 19815000 7025300 11587000 35882000 40161 2248 35875 335007;335008;335009;335010;335011;335012;335013;335014;335015;335016;335017;335018;335019 265561;265562;265563;265564;265565;265566;265567;265568;265569;265570;265571;265572;265573;265574 265564 3652 14 PLSSLTPLIMAAK Unmodified 1340.7738 0.77375881 2248 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8 3.46 3 9 1 2 1 1 1 1 1 1 1 1 1 88.593 87.201 2 4.9737E-09 100910 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 135.86 107.46 194370000 36123000 113500000 0 0 0 3734800 1892800 3406100 0 4499400 3311000 3900200 2292000 3921400 17786000 40162 2248 35875 335020;335021;335022;335023;335024;335025;335026;335027;335028;335029;335030;335031 265575;265576;265577;265578;265579;265580;265581;265582;265583;265584;265585 265579 8 PLSSQPQAIVTEDK Unmodified 1511.7831 0.78313752 1418 P40692 MLH1 DNA mismatch repair protein Mlh1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.276 49.434 2 6.976E-73 55226 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 190.46 163.57 882720000 0 0 0 51155000 41110000 84293000 65325000 48843000 73513000 111150000 87800000 96288000 77938000 62079000 83223000 40163 1418 35876 335032;335033;335034;335035;335036;335037;335038;335039;335040;335041;335042;335043 265586;265587;265588;265589;265590;265591;265592;265593;265594;265595 265593 10 PLSSSSVLQEPPAK Unmodified 1438.7668 0.76675917 464 O75152;A0A1B0GTU1 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 51.686 51.375 2 5.652E-06 58001 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 116.74 88.724 265670000 0 58231000 0 7789600 9344200 15133000 12041000 16946000 19760000 16531000 18255000 30917000 18869000 17914000 23940000 40164 464 35877 335044;335045;335046;335047;335048;335049;335050;335051;335052;335053;335054;335055;335056 265596;265597;265598;265599;265600;265601;265602;265603;265604;265605;265606;265607 265604 12 PLSSSVSNNK Unmodified 1031.5247 0.52473799 3926 Q96MU7 YTHDC1 YTH domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 10.862 11.026 2 0.002011 9761 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 98.033 74.078 46454000 0 0 0 0 0 0 24112000 0 13610000 0 0 8731900 0 0 0 40165 3926 35878 335057;335058;335059 265608;265609;265610 265610 3 PLSSVQENIQQK Unmodified 1369.7201 0.72014333 1695 P52732 KIF11 Kinesin-like protein KIF11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38.032 37.341 2 0 47382 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 294.93 256.64 406260000 6051200 218900000 0 9655000 8164500 17513000 10450000 10321000 9545100 16835000 20332000 18756000 17187000 14212000 28347000 40166 1695 35879 335060;335061;335062;335063;335064;335065;335066;335067;335068;335069;335070;335071;335072;335073 265611;265612;265613;265614;265615;265616;265617;265618;265619;265620;265621;265622;265623;265624;265625 265615 15 PLTALPFTTGSQDVSNAFSPSISK Unmodified 2464.2486 0.24856971 5301 Q9Y6Y8 SEC23IP SEC23-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 91.228 89.883 3 1.4043E-06 104425 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 48.641 40.744 74280000 20093000 24582000 0 0 0 1045800 0 2305500 0 5080100 3819100 2653000 0 1900600 12801000 40167 5301 35880 335074;335075;335076;335077;335078;335079;335080;335081;335082 265626;265627;265628;265629;265630;265631;265632 265626 7 PLTDAQVEAMK Oxidation (M) 1217.5962 0.59618837 3663 Q92797 SYMPK Symplekin yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 30.755 30.832 2 0.0013822 33809 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 69.276 38.589 7173200 0 0 0 0 0 4757400 0 0 0 2415800 0 0 0 0 0 40168 3663 35881 335083;335084 265633;265634 265633 5195 2 PLTDAQVEAMK Unmodified 1201.6013 0.60127375 3663 Q92797 SYMPK Symplekin yes yes 0 0 0 By MS/MS 2 0 1 1 51.023 45.277 2 0.0050313 58741 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.85 44.629 24674000 0 24674000 0 0 0 0 0 0 0 0 0 0 0 0 0 40169 3663 35881 335085 265635;265636 265635 2 PLTDSEK Unmodified 788.3916 0.39159855 939 P11216 PYGB Glycogen phosphorylase, brain form yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 7.2461 3.7921 2 0.03084 6207 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.626 24.592 68403000 788580 67614000 0 0 0 0 0 0 0 0 0 0 0 0 0 40170 939 35882 335086;335087 265637 265637 1 PLTDSQRVK Unmodified 1042.5771 0.57710791 4977 Q9UKV8;Q9HCK5 AGO2;AGO4 Protein argonaute-2;Protein argonaute-4 yes no 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 13.858 10.693 2 0.0054484 16016 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 137.84 108.68 33069000 28852000 0 4217000 0 0 0 0 0 0 0 0 0 0 0 0 40171 4977 35883 335088;335089 265638 265638 0 PLTEFPSPAEQPTCK Unmodified 1700.808 0.80797206 115 O00124 UBXN8 UBX domain-containing protein 8 yes yes 0 0 0 By MS/MS 2 0 1 1 68.198 62.299 2 0.00046607 79564 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.096 80.004 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40172 115 35884 335090 265639 265639 1 PLTESPFK Unmodified 917.48583 0.48583328 1707 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 46.006 46.282 2 0.0055405 52599 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 116.88 42.469 80923000 0 0 0 0 0 14726000 9450200 0 6771700 13798000 8572700 9139200 9864100 8600500 0 40173 1707 35885 335091;335092;335093;335094;335095;335096;335097;335098 265640;265641;265642 265640 3 PLTHSLSDK Unmodified 996.52401 0.52400971 3631 Q92576 PHF3 PHD finger protein 3 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 15.005 15.217 2 0.042904 14565 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 43.808 29.746 35401000 0 0 0 0 0 3809900 2297400 0 2815700 3016900 0 4957800 7524300 4232000 6747200 40174 3631 35886 335099;335100;335101;335102;335103;335104;335105;335106 265643 265643 1 PLTLPDFLAK Unmodified 1113.6434 0.64339656 736 P00813 ADA Adenosine deaminase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 8 3.46 1 3 1 1 1 1 90.564 88.644 2 0.0053747 112555 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.862 66.883 28698000 17218000 0 0 0 0 0 0 0 0 0 1741800 0 0 1656700 8081200 40175 736 35887 335107;335108;335109;335110 265644;265645 265644 2 PLTLSNYQTNK Unmodified 1277.6616 0.66156582 772 P04080 CSTB Cystatin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 47.08 45.797 2 0 51191 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 317.8 286.72 2578600000 599220000 1320500000 13484000 12929000 13800000 32655000 15384000 22579000 18748000 26903000 75370000 87063000 23378000 57412000 259160000 40176 772 35888 335111;335112;335113;335114;335115;335116;335117;335118;335119;335120;335121;335122;335123;335124;335125;335126 265646;265647;265648;265649;265650;265651;265652;265653;265654;265655;265656;265657;265658;265659;265660;265661;265662;265663 265661 18 PLTNMLEVVSHPHPVVPK Oxidation (M) 2009.0768 0.076817118 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 1 0 By MS/MS 2 0 1 1 75.693 67.563 4 0.0012637 89141 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.059 32.528 18438000 18438000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40177 2193 35889 335127 265664 265664 3560 1 PLTPAGHTGGPEPRPPAR Unmodified 1806.9489 0.94891449 4691 Q9NW68 BSDC1 BSD domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 32.445 32.647 4 0.0076696 35996 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 32.366 22.578 96506000 0 0 0 6590900 5190400 0 5426300 6493200 5530700 8467400 11488000 13955000 11565000 7449800 14349000 40178 4691 35890 335128;335129;335130;335131;335132;335133;335134;335135;335136;335137;335138 265665;265666;265667;265668;265669 265669 4 PLTPDQDEPPFK Unmodified 1382.6718 0.67179615 5104 Q9Y2I7 PIKFYVE 1-phosphatidylinositol 3-phosphate 5-kinase yes yes 0 0 0 By MS/MS 2 0 1 1 62.641 56.748 2 2.7919E-05 72928 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.41 102.2 25685000 0 25685000 0 0 0 0 0 0 0 0 0 0 0 0 0 40179 5104 35891 335139 265670;265671 265670 2 PLTSFGSAPSSEGAK Unmodified 1434.6991 0.69907354 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 46.448 46.161 2 4.3181E-116 58842 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 224.82 211.22 860950000 0 114090000 0 44723000 44733000 52031000 47619000 71837000 45166000 66879000 68187000 99549000 73121000 61494000 71518000 40180 5216 35892 335140;335141;335142;335143;335144;335145;335146;335147;335148;335149;335150;335151;335152;335153 265672;265673;265674;265675;265676;265677;265678;265679;265680;265681;265682;265683;265684;265685;265686;265687 265677 15 PLTSSLAK Unmodified 815.47527 0.4752686 4552 Q9NPI1 BRD7 Bromodomain-containing protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.501 26.701 2 0.03661 28732 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 51.787 10.285 145510000 0 0 0 11877000 9362100 11603000 11411000 12422000 10000000 14636000 13909000 16389000 11314000 11532000 11052000 40181 4552 35893 335154;335155;335156;335157;335158;335159;335160;335161;335162;335163;335164;335165 265688;265689;265690;265691 265689 4 PLTSSNPVLELELAEEK Unmodified 1867.9779 0.97787416 4041 Q99633 PRPF18 Pre-mRNA-splicing factor 18 yes yes 0 0 0 By MS/MS By MS/MS 4.67 3.77 2 1 2 1 92.024 87.113 2;3 6.8584E-72 108190 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 216.27 203.32 78678000 0 78678000 0 0 0 0 0 0 0 0 0 0 0 0 0 40182 4041 35894 335166;335167;335168 265692;265693;265694 265693 3 PLTSSSAAPQRPISTQR Unmodified 1795.9541 0.95405945 2564 Q15691 MAPRE1 Microtubule-associated protein RP/EB family member 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 32.453 32.732 3 0.0057257 35944 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 35.473 24.358 27947000 0 0 0 0 0 5176900 2542300 0 0 5161900 8947700 6118100 0 0 0 40183 2564 35895 335169;335170;335171;335172;335173 265695 265695 1 PLTTSGFHHSEEGTSSSGSK Unmodified 2031.9134 0.91337642 2759 Q5SW79 CEP170 Centrosomal protein of 170 kDa yes yes 0 0 0 By MS/MS 2 0 1 1 28.398 22.88 3 7.7459E-18 32330 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 103.17 98.999 14936000 14936000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40184 2759 35896 335174 265696 265696 1 PLTVLNK Unmodified 783.48544 0.48543935 1710 P53350 PLK1 Serine/threonine-protein kinase PLK1 yes yes 0 0 0 By MS/MS 10 0 1 1 36.407 37.139 2 0.046966 39929 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.672 12.989 10943000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10943000 40185 1710 35897 335175 265697 265697 1 PLVAVNTR Unmodified 868.51305 0.51305109 3411 Q8NCN4 RNF169 E3 ubiquitin-protein ligase RNF169 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 35.472 35.701 2 0.039356 38834 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 50.703 12.57 30546000 0 0 0 2296900 0 3199300 3579000 0 2394800 4158900 4055800 4465200 0 0 6395600 40186 3411 35898 335176;335177;335178;335179;335180;335181;335182;335183 265698;265699 265698 2 PLVDIETEALK Unmodified 1226.6758 0.6758189 938 P11182 DBT Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 75.358 75.539 2 0.00051485 87312 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 82.749 52.94 13680000 0 0 0 0 0 0 0 0 0 2615400 3772800 7291700 0 0 0 40187 938 35899 335184;335185;335186 265700 265700 1 PLVDPACITSIQPGAPK Unmodified 1762.9288 0.9287559 714 O96013 PAK4 Serine/threonine-protein kinase PAK 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.55 1 1 4 2 1 1 1 1 81.601 80.195 3 3.2792E-07 99192 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.247 91.542 79238000 0 65737000 0 2769200 2106900 0 3664200 0 0 0 0 0 0 4960600 0 40188 714 35900 335187;335188;335189;335190;335191;335192 265701;265702;265703;265704;265705;265706 265702 6 PLVEEPQNLIK Unmodified 1278.7184 0.71835242 64 CON__P02768-1;P02768 ALB Serum albumin yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.53 2.94 1 2 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 71.912 71.139 2 0.00048771 80934 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.647 72.945 + 396710000 334060 49540000 0 109800000 7903000 20347000 5464000 89087000 13485000 15584000 16684000 16239000 26017000 9560100 16662000 40189 64 35901 335193;335194;335195;335196;335197;335198;335199;335200;335201;335202;335203;335204;335205;335206;335207 265707;265708;265709;265710;265711;265712;265713;265714 265709 7 PLVEMDETPQVEK Unmodified 1513.7334 0.73341013 4672 Q9NVM9 ASUN Protein asunder homolog yes yes 0 0 0 By MS/MS 2 0 1 1 66.154 60.236 2 0.015471 77101 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.061 39.048 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40190 4672 35902 335208 265715 265715 1 PLVLCGDLNVAHEEIDLRNPK Unmodified 2401.2424 0.2423789 1222 P27695 APEX1 DNA-(apurinic or apyrimidinic site) lyase;DNA-(apurinic or apyrimidinic site) lyase, mitochondrial yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 85.1 79.204 4 4.4483E-38 101801 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 125.28 121.55 71452000 71452000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40191 1222 35903 335209;335210 265716;265717 265717 2 PLVLCGPPGSGK Unmodified 1180.6274 0.62742892 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 55.167 53.808 2 1.4647E-31 72915 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 192.26 141.56 643810000 218280000 205750000 6826100 0 10108000 20079000 8235200 11941000 12343000 14432000 18741000 34231000 24053000 21384000 37404000 40192 2392 35904 335211;335212;335213;335214;335215;335216;335217;335218;335219;335220;335221;335222;335223;335224;335225 265718;265719;265720;265721;265722;265723;265724;265725;265726;265727;265728;265729;265730;265731;265732;265733;265734;265735;265736;265737 265728 19 PLVLEGIDLGPCTSK Unmodified 1597.8385 0.83854391 13 A2RUC4 TYW5 tRNA wybutosine-synthesizing protein 5 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 89.304 85.25 2 0.00051199 101909 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 89.548 70.768 7938800 0 7938800 0 0 0 0 0 0 0 0 0 0 0 0 0 40193 13 35905 335226;335227 265738 265738 1 PLVLGPEFK Unmodified 998.58007 0.58006802 3126 Q86SF2 GALNT7 N-acetylgalactosaminyltransferase 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75.42 74.34 2 0.0051666 85158 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 81.548 43.989 282530000 72270000 6432000 37602000 8011500 9016600 10747000 12136000 14325000 11894000 17053000 17046000 18838000 15541000 10250000 21370000 40194 3126 35906 335228;335229;335230;335231;335232;335233;335234;335235;335236;335237;335238;335239;335240;335241;335242;335243 265739;265740;265741;265742;265743;265744;265745;265746;265747;265748;265749;265750;265751;265752;265753;265754 265743 15 PLVLPSPLVTPGSNSQER Unmodified 1890.0211 0.021076378 3955 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 83.75 83.838 2 5.7751E-11 97094 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 87.363 83.939 59404000 0 0 0 0 4530300 4759800 0 4732000 0 5028300 7917100 10151000 5020400 7211000 10054000 40195 3955 35907 335244;335245;335246;335247;335248;335249;335250;335251;335252 265755;265756;265757;265758 265758 3 PLVNGICDFDK Unmodified 1276.6122 0.61217279 2852 Q68CP9 ARID2 AT-rich interactive domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.642 69.717 2 0.00072876 80055 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 89.247 78.982 76127000 0 0 0 3806000 5913200 6337100 5947800 5657500 3564100 5977300 6451000 8522900 6487500 7645800 9817000 40196 2852 35908 335253;335254;335255;335256;335257;335258;335259;335260;335261;335262;335263;335264 265759;265760;265761;265762;265763;265764;265765;265766;265767;265768;265769 265764 11 PLVPGMEVSFYK Unmodified 1365.7003 0.70025951 3489 Q8TCG1 KIAA1524 Protein CIP2A yes yes 0 0 0 By MS/MS 2 0 1 1 89.442 81.312 2 0.0023631 105634 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.17 64.899 8508000 8508000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40197 3489 35909 335265 265770 265770 1 PLVSDADQAASR Unmodified 1228.6048 0.60477922 5308 yes yes 0 0 0 By MS/MS 10 0 1 1 7.0186 7.1892 3 0.035479 4960 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 22.885 6.5074 + 11032000 0 0 0 0 0 0 0 0 11032000 0 0 0 0 0 0 40198 5308 35910 335266 265771 265771 1 PLVTIPAPTSTK Unmodified 1223.7125 0.71253876 3025 Q70E73 RAPH1 Ras-associated and pleckstrin homology domains-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 67.887 68.007 2 2.5886E-05 78303 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 100.48 70.667 71373000 0 0 0 0 4499500 7459500 6706300 7515600 5788700 7202900 8847300 0 0 9001300 14352000 40199 3025 35911 335267;335268;335269;335270;335271;335272;335273;335274;335275 265772;265773;265774;265775;265776;265777;265778 265772 6 PLVTPGSTLTLLTR Unmodified 1467.8661 0.86607929 4296 Q9GZN2 TGIF2 Homeobox protein TGIF2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 87.234 87.375 2 0.00010063 101009 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.397 63.635 25835000 0 0 0 0 0 2895900 1444200 1979100 2360300 3521500 2469400 0 1884200 1651700 7628800 40200 4296 35912 335276;335277;335278;335279;335280;335281;335282;335283;335284;335285 265779;265780;265781;265782;265783;265784;265785;265786;265787;265788 265782 10 PLVVFVLGGPGAGK Unmodified 1309.7758 0.77580772 1268 P30085 CMPK1 UMP-CMP kinase yes yes 0 0 0 By MS/MS 10 0 1 1 88.183 88.333 2 1.3546E-05 102231 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.047 66.961 3650600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3650600 40201 1268 35913 335286 265789 265789 1 PLVVQVPTFAR Unmodified 1225.7183 0.71829284 134 O00257 CBX4 E3 SUMO-protein ligase CBX4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 82.556 82.597 2 0.0055887 95596 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 68.735 29.587 15392000 0 0 0 0 1415800 3179100 0 0 0 0 1988900 0 0 0 8808500 40202 134 35914 335287;335288;335289;335290;335291;335292 265790;265791;265792;265793 265790 4 PLWIEEPTSPDDILGHATISK Unmodified 2318.1794 0.17942751 3054 Q7L5Y1 ENOSF1 Mitochondrial enolase superfamily member 1 yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 92.489 88.804 3 0.0084855 107101 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 29.126 25.838 14114000 0 12082000 2031700 0 0 0 0 0 0 0 0 0 0 0 0 40203 3054 35915 335293;335294 265794 265794 1 PLYEGLGSGGEK Unmodified 1205.5928 0.59281755 4759 Q9NZ32 ACTR10 Actin-related protein 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 45.785 45.175 2 8.931E-13 57461 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.35 109.08 327000000 0 232490000 0 4076000 4974400 6915000 5267300 5032100 4437500 8769500 11016000 12540000 6640300 8696100 16142000 40204 4759 35916 335295;335296;335297;335298;335299;335300;335301;335302;335303;335304;335305;335306;335307;335308;335309 265795;265796;265797;265798;265799;265800;265801;265802;265803;265804;265805;265806 265798 12 PLYETIEDNDVK Unmodified 1434.6878 0.68784015 4541 Q9NP92 MRPS30 28S ribosomal protein S30, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 62.82 56.927 2 0.00016657 73040 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.472 66.785 15283000 0 15283000 0 0 0 0 0 0 0 0 0 0 0 0 0 40205 4541 35917 335310 265807 265807 1 PLYFADR Unmodified 880.4443 0.44430282 840 P07355 ANXA2 Annexin A2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 49.661 49.98 2 0.024118 56205 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 99.919 63.332 335560000 0 0 0 0 0 5600400 17951000 47530000 0 27783000 38942000 52101000 40728000 32639000 72281000 40206 840 35918 335311;335312;335313;335314;335315;335316;335317;335318;335319 265808;265809 265808 2 PLYGDVFGTNAAEFQTK Unmodified 1856.8945 0.89447888 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.04 3.41 6 1 21 1 4 2 1 2 2 1 2 2 2 2 2 1 2 2 82.364 81.442 2;3 0 100897 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 284.79 232.3 475460000 11793000 224040000 22686000 1426600 4149400 22432000 5781500 8154800 17887000 31548000 27414000 23529000 0 13416000 61200000 40207 2290 35919 335320;335321;335322;335323;335324;335325;335326;335327;335328;335329;335330;335331;335332;335333;335334;335335;335336;335337;335338;335339;335340;335341;335342;335343;335344;335345;335346;335347 265810;265811;265812;265813;265814;265815;265816;265817;265818;265819;265820;265821;265822;265823;265824;265825;265826;265827;265828;265829;265830;265831 265814 21 PLYIPSNR Unmodified 958.52362 0.52361577 996 P14314 PRKCSH Glucosidase 2 subunit beta yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.029 48.192 2 0.0045396 53391 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 132.29 62.017 837310000 0 0 0 30144000 29931000 36449000 41079000 40185000 34848000 56994000 129730000 92040000 59155000 83288000 203470000 40208 996 35920 335348;335349;335350;335351;335352;335353;335354;335355;335356;335357;335358;335359 265832;265833;265834;265835;265836;265837;265838;265839;265840;265841;265842 265839 10 PLYSVTVK Unmodified 905.52222 0.52221879 1741 P54578 USP14 Ubiquitin carboxyl-terminal hydrolase 14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.53 3 2 11 2 2 1 1 1 1 1 1 1 1 1 1 1 1 50.009 48.355 2 0.0025172 60417 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 122.13 82.91 2796600000 1538200000 695560000 132280000 21978000 14485000 64251000 26720000 20673000 14592000 40572000 52519000 47460000 31997000 0 95397000 40209 1741 35921 335360;335361;335362;335363;335364;335365;335366;335367;335368;335369;335370;335371;335372;335373;335374;335375 265843;265844;265845;265846;265847;265848;265849;265850;265851 265851 7 PLYTPGQQVYFR Unmodified 1467.751 0.75104953 36 A8K2U0 A2ML1 Alpha-2-macroglobulin-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 74.038 73.993 2 3.3228E-08 85851 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 152.34 131.47 34370000 0 0 0 22929000 0 0 0 5066600 0 0 6373800 0 0 0 0 40210 36 35922 335376;335377;335378 265852;265853;265854;265855 265855 4 PLYVALAQR Unmodified 1029.5971 0.59711507 958;2268 Q13310;P11940;Q9H361;Q4VXU2 PABPC4;PABPC1;PABPC3;PABPC1L Polyadenylate-binding protein 4;Polyadenylate-binding protein 1;Polyadenylate-binding protein 3;Polyadenylate-binding protein 1-like no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 2 1 62.733 62.753 2 1.3793E-05 71482 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 166.34 120.62 445710000 0 0 0 80331000 0 92029000 0 66294000 75912000 0 0 131140000 0 0 0 40211 2268;958 35923 335379;335380;335381;335382;335383;335384;335385;335386;335387 265856;265857;265858;265859;265860;265861;265862;265863;265864 265857 7 PLYVALAQRK Unmodified 1157.6921 0.69207809 958;2268 Q13310;P11940;Q9H361;Q4VXU2 PABPC4;PABPC1;PABPC3;PABPC1L Polyadenylate-binding protein 4;Polyadenylate-binding protein 1;Polyadenylate-binding protein 3;Polyadenylate-binding protein 1-like no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 2 1 1 1 1 1 1 1 1 50.105 50.23 3 0.00010409 56781 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 117.89 95.804 451780000 0 0 0 17127000 11616000 39242000 40073000 28338000 53237000 38970000 0 76542000 34905000 25601000 86128000 40212 2268;958 35924 335388;335389;335390;335391;335392;335393;335394;335395;335396;335397;335398;335399;335400 265865;265866;265867;265868;265869;265870;265871;265872;265873;265874;265875;265876;265877;265878;265879;265880;265881 265866 17 PMAAEIEGSDCECNPAGK Unmodified 1934.7808 0.78084739 637 O95263 PDE8B High affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8B yes yes 0 0 0 By MS/MS 2 0 1 1 47.707 42.144 2 3.4718E-64 54916 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 165.7 161.36 13903000 0 13903000 0 0 0 0 0 0 0 0 0 0 0 0 0 40213 637 35925 335401 265882 265882 1 PMAGTTDREEATR Unmodified 1433.6569 0.65689115 2667 Q3KQU3 MAP7D1 MAP7 domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 11.673 11.82 3 0.0080584 10076 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.068 23.113 64629000 0 0 0 3241300 5044800 6391700 3578800 4349600 3947800 5298200 3881000 8807500 5711900 5829400 8547000 40214 2667 35926 335402;335403;335404;335405;335406;335407;335408;335409;335410;335411;335412;335413 265883;265884;265885;265886;265887 265883 5 PMAHSELVK Unmodified 1010.5219 0.52190122 3247 Q8IWV8 UBR2 E3 ubiquitin-protein ligase UBR2 yes yes 0 0 0 By MS/MS 2 0 1 1 24.769 19.691 2 0.021764 28107 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.665 40.824 13821000 13821000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40215 3247 35927 335414 265888 265888 1 PMALYSLESIK Unmodified 1250.6581 0.65806035 2800 Q5THK1 PRR14L Protein PRR14L yes yes 0 0 0 By MS/MS 2 0 1 1 86.516 78.385 2 0.00060942 102247 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.048 79.646 7352900 7352900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40216 2800 35928 335415 265889 265889 1 PMAVAGANQYTFHLEATENPGALIK Oxidation (M) 2658.3112 0.31118674 3741 Q96AT9 RPE Ribulose-phosphate 3-epimerase yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 86.234 80.352 3 2.5529E-79 103048 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 139.69 125.96 28431000 28431000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40217 3741 35929 335416;335417 265890;265891 265891 5319 2 PMAVAGANQYTFHLEATENPGALIK Unmodified 2642.3163 0.31627212 3741 Q96AT9 RPE Ribulose-phosphate 3-epimerase yes yes 0 0 0 By MS/MS 2 0 1 1 89.879 81.748 3 1.7932E-30 106224 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 100.64 85.132 9215000 9215000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40218 3741 35929 335418 265892;265893 265892 2 PMAYANTLLQLGMM Unmodified 1552.7452 0.74517757 1709 P53041 PPP5C Serine/threonine-protein phosphatase 5 yes yes 0 0 0 By MS/MS 2 0 1 1 100.22 95.503 2 0.0015012 118054 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.998 70.229 8369300 0 8369300 0 0 0 0 0 0 0 0 0 0 0 0 0 40219 1709 35930 335419 265894;265895 265894 2 PMAYANTLLQLGMM 2 Oxidation (M) 1584.735 0.73500681 1709 P53041 PPP5C Serine/threonine-protein phosphatase 5 yes yes 0 2 0 By MS/MS 2 0 1 1 95.575 90.71 2 0.014495 112504 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 50.473 32.161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40220 1709 35930 335420 265896 265896 2762;2763;2764 1 PMAYANTLLQLGMM Oxidation (M) 1568.7401 0.74009219 1709 P53041 PPP5C Serine/threonine-protein phosphatase 5 yes yes 0 1 0 By MS/MS 2 0 1 1 98.109 93.335 2 0.006223 115551 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.841 57.46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40221 1709 35930 335421 265897 265897 2762;2763;2764 1 PMCETLTYISK Unmodified 1341.6309 0.63085932 589 O94822 LTN1 E3 ubiquitin-protein ligase listerin yes yes 0 0 0 By MS/MS 2 0 1 1 68.513 62.613 2 0.0064992 80015 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.789 80.729 17447000 0 17447000 0 0 0 0 0 0 0 0 0 0 0 0 0 40222 589 35931 335422 265898 265898 1 PMCVESFSDYPPLGR Oxidation (M) 1769.7753 0.77529172 1960 P68104;Q5VTE0 EEF1A1;EEF1A1P5 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3 yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 56 3 5 5 3 4 4 5 5 4 7 5 6 76.215 76.285 2;3 1.0664E-113 86574 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 204.17 198.14 8698700000 0 0 0 299550000 384320000 960480000 601350000 544460000 798530000 854400000 832900000 862130000 770240000 643660000 1146700000 40223 1960 35932 335423;335424;335425;335426;335427;335428;335429;335430;335431;335432;335433;335434;335435;335436;335437;335438;335439;335440;335441;335442;335443;335444;335445;335446;335447;335448;335449;335450;335451;335452;335453;335454;335455;335456;335457;335458;335459;335460;335461;335462;335463;335464;335465;335466;335467;335468;335469;335470;335471;335472;335473;335474;335475;335476;335477;335478 265899;265900;265901;265902;265903;265904;265905;265906;265907;265908;265909;265910;265911;265912;265913;265914;265915;265916;265917;265918;265919;265920;265921;265922;265923;265924;265925;265926;265927;265928;265929;265930;265931;265932;265933;265934;265935;265936;265937;265938;265939;265940;265941;265942;265943;265944;265945;265946;265947;265948;265949;265950;265951;265952;265953;265954;265955;265956;265957;265958;265959;265960;265961;265962;265963 265900 3149 53 PMCVESFSDYPPLGR Unmodified 1753.7804 0.7803771 1960 P68104;Q5VTE0 EEF1A1;EEF1A1P5 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 27 2 2 3 3 2 2 3 2 2 2 2 2 80.812 80.874 2;3 1.6448E-83 93567 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 226.4 217.21 4855100000 0 0 0 68099000 134750000 556100000 171580000 362560000 339930000 448060000 432510000 415690000 256440000 407880000 1261500000 40224 1960 35932 335479;335480;335481;335482;335483;335484;335485;335486;335487;335488;335489;335490;335491;335492;335493;335494;335495;335496;335497;335498;335499;335500;335501;335502;335503;335504;335505 265964;265965;265966;265967;265968;265969;265970;265971;265972;265973;265974;265975;265976;265977;265978;265979;265980;265981;265982;265983;265984;265985;265986;265987;265988;265989;265990;265991;265992;265993;265994;265995;265996;265997;265998 265997 23 PMDTSVLSEEGGEPFQK Oxidation (M) 1865.8353 0.83530902 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 1 0 By MS/MS By MS/MS By matching 5 3.56 2 2 2 4 1 1 64.848 61.324 2;3 1.8108E-182 77485 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 244.18 217.39 69470000 0 64066000 0 0 0 3908600 0 0 1495500 0 0 0 0 0 0 40225 2203 35933 335506;335507;335508;335509;335510;335511 265999;266000;266001;266002 266000 3582 4 PMDTSVLSEEGGEPFQK Unmodified 1849.8404 0.8403944 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 6.25 3.77 2 2 4 4 1 1 1 1 73.473 71.462 2;3 8.3798E-95 88748 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 243.88 230.93 194240000 0 176990000 0 0 0 0 0 0 0 0 2326000 3608200 0 3462500 7855900 40226 2203 35933 335512;335513;335514;335515;335516;335517;335518;335519 266003;266004;266005;266006;266007;266008;266009 266003 7 PMEIDGEVEIPSSK Oxidation (M) 1545.7232 0.72323938 443 O60907 TBL1X F-box-like/WD repeat-containing protein TBL1X yes yes 0 1 0 By MS/MS By MS/MS 5 3.56 1 1 1 2 1 61.202 55.864 2 1.4621E-29 71599 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 142.08 116.87 25979000 0 25979000 0 0 0 0 0 0 0 0 0 0 0 0 0 40227 443 35934 335520;335521;335522 266010;266011 266010 568 2 PMEIDGEVEIPSSK Unmodified 1529.7283 0.72832476 443 O60907 TBL1X F-box-like/WD repeat-containing protein TBL1X yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 73.667 69.116 2 0.0094512 86780 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.176 59.328 66374000 0 66374000 0 0 0 0 0 0 0 0 0 0 0 0 0 40228 443 35934 335523;335524 266012 266012 1 PMELIIGK Unmodified 899.51502 0.51502492 123 O00170 AIP AH receptor-interacting protein yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 65.598 65.855 2 0.017656 74424 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.313 65.313 11351000 0 0 0 0 0 4097700 0 0 0 0 0 0 0 0 7253600 40229 123 35935 335525;335526 266013;266014 266014 2 PMESMHEK Oxidation (M) 1003.4103 0.41030186 1656 P51532 SMARCA4 Transcription activator BRG1 yes yes 0 1 0 By MS/MS 2 0 1 1 5.8001 2.5597 2 0.023921 4540 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.377 54.948 21619000 0 21619000 0 0 0 0 0 0 0 0 0 0 0 0 0 40230 1656 35936 335527 266015 266015 1 PMFIVNTNVPR Unmodified 1286.6805 0.68052712 994 P14174 MIF Macrophage migration inhibitory factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.502 75.555 2 9.5382E-11 86168 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 151.44 139.39 2123700000 0 0 0 10537000 10647000 14109000 0 22811000 14109000 21790000 268700000 310720000 23234000 216590000 1210400000 40231 994 35937 335528;335529;335530;335531;335532;335533;335534;335535;335536;335537;335538;335539 266016;266017;266018;266019;266020;266021;266022;266023;266024;266025;266026;266027 266023 11 PMFIVNTNVPR Oxidation (M) 1302.6754 0.67544174 994 P14174 MIF Macrophage migration inhibitory factor yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 2 2 2 2 66.109 66.481 2;3 6.2835E-11 75484 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 151.44 144.22 1663200000 0 0 0 0 0 0 0 0 0 0 311560000 365590000 0 240720000 745310000 40232 994 35937 335540;335541;335542;335543;335544;335545;335546;335547 266028;266029;266030;266031;266032;266033;266034;266035;266036;266037;266038;266039;266040 266036 1344 12 PMFIVNTNVPR Acetyl (Protein N-term);Oxidation (M) 1344.686 0.68600643 994 P14174 MIF Macrophage migration inhibitory factor yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 87.38 87.535 2 0.00029084 101084 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.735 57.141 5683800 0 0 0 0 0 0 0 0 0 0 1519900 0 0 1395400 2768500 40233 994 35937 335548;335549;335550;335551 266041;266042;266043;266044;266045 266041 1344 5 PMFIVNTNVPR Acetyl (Protein N-term) 1328.6911 0.69109181 994 P14174 MIF Macrophage migration inhibitory factor yes yes 1 0 0 By MS/MS 10 0 1 1 95.45 95.597 2 0.00071515 110776 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.735 63.369 1768400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1768400 40234 994 35937 335552 266046;266047 266046 2 PMGGSAPAK Unmodified 814.40072 0.40072345 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 0 By MS/MS 2 0 1 1 8.7471 5.4923 2 0.034128 8020 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.265 48.825 58323000 0 58323000 0 0 0 0 0 0 0 0 0 0 0 0 0 40235 2361 35938 335553 266048 266048 1 PMINLYTDK Oxidation (M) 1109.5427 0.54269624 3664 Q92804 TAF15 TATA-binding protein-associated factor 2N yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.56 3.62 4 1 11 2 2 1 1 1 1 1 1 1 1 1 1 1 1 50.622 48.913 2 0.0031592 55756 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 85.676 67.69 319000000 9350500 99754000 6015200 13779000 13245000 18287000 16157000 10804000 18924000 0 22216000 28668000 17899000 22441000 21458000 40236 3664 35939 335554;335555;335556;335557;335558;335559;335560;335561;335562;335563;335564;335565;335566;335567;335568;335569 266049;266050;266051;266052;266053;266054;266055;266056;266057;266058;266059;266060;266061;266062;266063;266064;266065 266065 5199 13 PMINLYTDK Unmodified 1093.5478 0.54778161 3664 Q92804 TAF15 TATA-binding protein-associated factor 2N yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 62.562 61.237 2 4.4987E-15 68895 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 190.26 161.36 468390000 37161000 105430000 5495800 21284000 22809000 0 19750000 55940000 17011000 32537000 37459000 0 34415000 35774000 43324000 40237 3664 35939 335570;335571;335572;335573;335574;335575;335576;335577;335578;335579;335580;335581;335582 266066;266067;266068;266069;266070;266071;266072;266073;266074;266075;266076 266073 9 PMLETEVLDNDGGGLATIFEP Oxidation (M) 2233.046 0.046030079 4491 Q9HAV4 XPO5 Exportin-5 yes yes 0 1 0 By MS/MS 2 0 1 1 98.729 93.995 2 0.0050168 116312 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 40.83 31.467 16082000 0 16082000 0 0 0 0 0 0 0 0 0 0 0 0 0 40238 4491 35940 335583 266077 266077 5928 1 PMLETEVLDNDGGGLATIFEP Unmodified 2217.0511 0.051115457 4491 Q9HAV4 XPO5 Exportin-5 yes yes 0 0 0 By MS/MS 2 0 1 1 99.924 95.211 2 0.012533 117647 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 42.095 29.93 11522000 0 11522000 0 0 0 0 0 0 0 0 0 0 0 0 0 40239 4491 35940 335584 266078 266078 1 PMPNPNPNHPSSSGSFSDADLADGVSGGEGK Oxidation (M) 3040.3105 0.31047105 995 P14209 CD99 CD99 antigen yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 58.64 57.309 3 2.8287E-126 65176 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 135.39 134.2 548680000 7640500 40869000 2004600 27054000 39809000 43595000 37761000 34489000 44635000 37858000 44613000 59209000 46857000 35017000 47265000 40240 995 35941 335585;335586;335587;335588;335589;335590;335591;335592;335593;335594;335595;335596;335597;335598;335599;335600 266079;266080;266081;266082;266083;266084;266085;266086;266087;266088;266089;266090;266091;266092;266093;266094;266095;266096;266097;266098 266094 1346 20 PMPNPNPNHPSSSGSFSDADLADGVSGGEGK Unmodified 3024.3156 0.31555643 995 P14209 CD99 CD99 antigen yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64.375 63.767 3 3.8283E-118 80903 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 142.59 141.55 606600000 0 59075000 2099900 25873000 33886000 35838000 23297000 44485000 27457000 55277000 58192000 55763000 43987000 58963000 82409000 40241 995 35941 335601;335602;335603;335604;335605;335606;335607;335608;335609;335610;335611;335612;335613;335614 266099;266100;266101;266102;266103;266104;266105;266106;266107;266108;266109;266110;266111;266112;266113 266102 15 PMQFLGDEETVR Unmodified 1420.6657 0.66566492 1077 P18669;P15259 PGAM1;PGAM2 Phosphoglycerate mutase 1;Phosphoglycerate mutase 2 yes no 0 0 0 By matching By MS/MS 10 0 2 1 1 66.581 66.948 2 0.00025852 75972 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.89 44.174 7717300 0 0 0 0 0 0 0 0 0 0 0 0 0 1081700 6635600 40242 1077 35942 335615;335616 266114 266114 1 PMQFLGDEETVRK Unmodified 1548.7606 0.76062794 1077 P18669;P15259 PGAM1;PGAM2 Phosphoglycerate mutase 1;Phosphoglycerate mutase 2 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.04 3.83 1 6 2 15 4 3 2 1 1 1 1 1 1 1 1 2 1 2 2 59.271 57.707 2;3 3.4285E-22 61011 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 143.31 122.93 3280400000 590350000 1454700000 383570000 25200000 11845000 20907000 16515000 21698000 11711000 29280000 7613200 118710000 18803000 109400000 460170000 40243 1077 35943 335617;335618;335619;335620;335621;335622;335623;335624;335625;335626;335627;335628;335629;335630;335631;335632;335633;335634;335635;335636;335637;335638;335639;335640 266115;266116;266117;266118;266119;266120;266121;266122;266123;266124;266125;266126;266127;266128;266129;266130;266131;266132;266133;266134;266135;266136;266137;266138;266139;266140 266133 22 PMQFLGDEETVRK Oxidation (M) 1564.7555 0.75554256 1077 P18669;P15259 PGAM1;PGAM2 Phosphoglycerate mutase 1;Phosphoglycerate mutase 2 yes no 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 6.79 3.78 5 3 11 1 2 5 1 2 1 1 1 1 1 1 2 43.61 42.201 2;3 1.135E-21 51820 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 135.94 108.8 1263000000 6284600 135420000 796570000 18566000 0 30417000 12348000 0 14316000 20146000 0 10935000 17559000 3645900 196800000 40244 1077 35943 335641;335642;335643;335644;335645;335646;335647;335648;335649;335650;335651;335652;335653;335654;335655;335656;335657;335658;335659 266141;266142;266143;266144;266145;266146;266147;266148;266149;266150;266151;266152;266153;266154;266155;266156;266157;266158;266159 266148 1553 15 PMQPGPHVVK Oxidation (M) 1104.575 0.57499942 487 O75369 FLNB Filamin-B yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 21.174 17.369 2 0.0054902 22225 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 83.265 61.134 56208000 43447000 0 12760000 0 0 0 0 0 0 0 0 0 0 0 0 40245 487 35944 335660;335661 266160;266161;266162 266162 623 3 PMQPGPHVVK Unmodified 1088.5801 0.5800848 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 28.528 24.189 2 0.035725 34156 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.721 40.567 56002000 50276000 0 5726100 0 0 0 0 0 0 0 0 0 0 0 0 40246 487 35944 335662;335663 266163 266163 1 PMSYEEK Unmodified 882.37932 0.3793193 441 O60885 BRD4 Bromodomain-containing protein 4 yes yes 0 0 0 By MS/MS 2 0 1 1 15.642 12.301 2 0.022382 16397 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.32 80.197 27129000 0 27129000 0 0 0 0 0 0 0 0 0 0 0 0 0 40247 441 35945 335664 266164 266164 1 PMTQYQDTSK Unmodified 1197.5336 0.53358811 563 O75940 SMNDC1 Survival of motor neuron-related-splicing factor 30 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 16.583 16.778 2 0.0021587 15514 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.033 81.257 25265000 0 0 0 734800 740500 2547600 0 929560 0 1855400 4086500 5949900 0 2962100 5458500 40248 563 35946 335665;335666;335667;335668;335669;335670;335671;335672;335673 266165;266166;266167;266168;266169 266166 5 PMVGPEAGGTK Oxidation (M) 1058.5066 0.50664508 4365 Q9H2G2 SLK STE20-like serine/threonine-protein kinase yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 15.898 14.902 2 0.0028763 14182 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.65 27.397 48986000 2598100 32185000 0 0 0 3282400 2173200 0 0 2270900 0 0 0 3379100 3097000 40249 4365 35947 335674;335675;335676;335677;335678;335679;335680 266170;266171;266172;266173 266173 5823 4 PMVGPEAGGTK Unmodified 1042.5117 0.51173046 4365 Q9H2G2 SLK STE20-like serine/threonine-protein kinase yes yes 0 0 0 By matching By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 26.811 22.561 2 0.013309 28125 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 64.04 52.319 168520000 5815700 161320000 1381000 0 0 0 0 0 0 0 0 0 0 0 0 40250 4365 35947 335681;335682;335683;335684 266174;266175 266175 2 PMVLGHEASGTVEK Unmodified 1453.7235 0.72351415 2045 Q00796 SORD Sorbitol dehydrogenase yes yes 0 0 0 By MS/MS 2 0 1 1 41.562 37.894 3 0.006032 47929 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 54.871 31.859 7091300 0 0 7091300 0 0 0 0 0 0 0 0 0 0 0 0 40251 2045 35948 335685 266176 266176 0 PMVLVAGQYSTGK Unmodified 1349.7013 0.70132214 4777 Q9NZN4 EHD2 EH domain-containing protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 68.99 60.696 2 0.0097694 81178 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.652 64.727 6592100 6592100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40252 4777 35949 335686 266177 266177 1 PMVNLDK Unmodified 815.42112 0.42112454 2004 P82979 SARNP SAP domain-containing ribonucleoprotein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34.233 33.791 2 0.018227 35924 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 112.37 61.831 646810000 0 466030000 5053700 12293000 8527800 15231000 8409200 9528700 7715300 14680000 21773000 24058000 10285000 13384000 29833000 40253 2004 35950 335687;335688;335689;335690;335691;335692;335693;335694;335695;335696;335697;335698;335699;335700 266178;266179;266180;266181;266182;266183 266182 5 PMVYLVNLSEK Oxidation (M) 1307.6795 0.67952407 4636 Q9NTK5 OLA1 Obg-like ATPase 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS 7.08 3.71 3 2 8 2 2 1 1 1 1 1 1 1 1 1 75.115 73.403 2 1.292E-10 93853 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 152.28 136.07 441730000 233420000 48635000 37319000 8792600 0 21903000 10585000 8375600 0 16576000 0 22845000 0 9286600 23993000 40254 4636 35951 335701;335702;335703;335704;335705;335706;335707;335708;335709;335710;335711;335712;335713 266184;266185;266186;266187;266188;266189;266190;266191 266190 6045 7 PMVYLVNLSEK Unmodified 1291.6846 0.68460945 4636 Q9NTK5 OLA1 Obg-like ATPase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81.069 80.018 2 1.904E-28 101519 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 196.88 196.88 353690000 264040000 8540800 19341000 1041300 1473800 6609100 2522600 4049900 2963500 5854800 5438800 6495900 1928900 5132300 18255000 40255 4636 35951 335714;335715;335716;335717;335718;335719;335720;335721;335722;335723;335724;335725;335726;335727;335728;335729 266192;266193;266194;266195;266196;266197;266198;266199;266200;266201;266202 266197 9 PMWEDDANK Oxidation (M) 1120.4495 0.44952413 415 O60573 EIF4E2 Eukaryotic translation initiation factor 4E type 2 yes yes 0 1 0 By MS/MS 2 0 1 1 25.941 21.738 2 0.013954 28687 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.438 66.859 14350000 0 14350000 0 0 0 0 0 0 0 0 0 0 0 0 0 40256 415 35952 335730 266203 266203 515 1 PMYGPGYTGLK Unmodified 1182.5743 0.57433072 3699 Q92995 USP13 Ubiquitin carboxyl-terminal hydrolase 13 yes yes 0 0 0 By MS/MS 2 0 1 1 61.761 53.506 2 0.0039829 72441 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.338 66.187 11878000 11878000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40257 3699 35953 335731 266204 266204 1 PNAAIRDCDR Unmodified 1186.5513 0.55130386 1625 P50502;Q8IZP2 ST13;ST13P4 Hsc70-interacting protein;Putative protein FAM10A4 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 10.077 10.259 3 0.016473 8453 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.893 46.807 772810000 0 0 0 0 28479000 0 31356000 28173000 22277000 59074000 115900000 116420000 41579000 99257000 230290000 40258 1625 35954 335732;335733;335734;335735;335736;335737;335738;335739;335740;335741 266205;266206;266207;266208;266209;266210;266211;266212 266207 1 PNAAIRDCDRAIEINPDSAQPYK Unmodified 2613.2605 0.26054816 1625 P50502;Q8IZP2 ST13;ST13P4 Hsc70-interacting protein;Putative protein FAM10A4 yes no 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.12 3.41 5 1 2 2 2 2 1 1 62.871 58.665 3;4 1.8611E-55 78465 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 131.59 117.91 852080000 655400000 50631000 108870000 0 0 0 0 0 0 0 0 10670000 0 0 26515000 40259 1625 35955 335742;335743;335744;335745;335746;335747;335748;335749 266213;266214;266215;266216;266217;266218;266219 266217 7 PNAEDMTSK Unmodified 991.42806 0.42806041 4069 Q99873 PRMT1 Protein arginine N-methyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11.671 11.276 2 0.0033909 9508 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 105.1 91.43 173450000 19447000 98756000 0 1350400 850120 2935300 1537600 1490900 2029600 2169900 6304400 6404800 3217300 5940400 21015000 40260 4069 35956 335750;335751;335752;335753;335754;335755;335756;335757;335758;335759;335760;335761;335762;335763 266220;266221;266222;266223;266224;266225;266226 266223 7 PNAGEESVMNLDK Unmodified 1402.6398 0.6398441 1293 P31040 SDHA Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 54.132 48.326 2 5.8688E-21 62447 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 162.49 140.49 20305000 0 20305000 0 0 0 0 0 0 0 0 0 0 0 0 0 40261 1293 35957 335764 266227 266227 1 PNAITYGYYNK Unmodified 1302.6245 0.62445203 2830 Q5VZ89 DENND4C DENN domain-containing protein 4C yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 53.819 46.869 2 3.7182E-09 61433 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.51 123.29 27026000 7287600 19738000 0 0 0 0 0 0 0 0 0 0 0 0 0 40262 2830 35958 335765;335766 266228;266229 266228 2 PNASVALHK Unmodified 935.51886 0.51886475 1482 P43686 PSMC4 26S protease regulatory subunit 6B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17.392 16.785 2 1.1523E-05 21887 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 154.12 121.76 241700000 70957000 47695000 32599000 3705600 4584900 9363600 1796600 1786300 2088600 13193000 13330000 24261000 2305300 3265000 10767000 40263 1482 35959 335767;335768;335769;335770;335771;335772;335773;335774;335775;335776;335777;335778;335779;335780;335781 266230;266231;266232;266233;266234;266235;266236;266237;266238;266239 266236 10 PNATQEELK Unmodified 1028.5138 0.51383895 1303 P31689 DNAJA1 DnaJ homolog subfamily A member 1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 15.975 15.633 2 0.0032992 14291 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 123.5 64.689 211700000 0 112570000 0 6434900 4977000 20584000 4444100 4744600 14764000 16027000 0 0 0 27155000 0 40264 1303 35960 335782;335783;335784;335785;335786;335787;335788;335789;335790 266240;266241;266242;266243;266244 266244 5 PNATQEELKK Unmodified 1156.6088 0.60880197 1303 P31689 DNAJA1 DnaJ homolog subfamily A member 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 13.447 10.238 3 0.00010112 13630 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.38 86.009 102950000 9483800 90161000 3301300 0 0 0 0 0 0 0 0 0 0 0 0 40265 1303 35961 335791;335792;335793 266245;266246 266246 2 PNDQILAEDK Unmodified 1141.5615 0.56151742 1765 P55263 ADK Adenosine kinase yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 6.71 3.81 2 1 4 1 2 1 1 1 1 33.633 31.586 2 0.0017893 34014 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 101.82 79.326 287730000 8289000 257260000 0 0 0 2250200 0 0 0 0 4229100 0 0 2996500 12707000 40266 1765 35962 335794;335795;335796;335797;335798;335799;335800 266247;266248;266249;266250;266251;266252 266248 6 PNDSRALQLMTK Unmodified 1372.7133 0.71328381 4707 Q9NWX6 THG1L Probable tRNA(His) guanylyltransferase yes yes 0 0 1 By MS/MS 2 0 1 1 56.67 48.494 3 0.041646 66210 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.477 21.378 24693000 24693000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40267 4707 35963 335801 266253 266253 0 PNEGADGQWK Unmodified 1100.4887 0.48868683 3405 Q8NC51 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 18.858 18.733 2 0.0043308 17936 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.233 60.185 56272000 0 29537000 0 939430 848010 2736900 1411200 0 2994600 2316600 2716600 3201500 2230400 2091500 5249000 40268 3405 35964 335802;335803;335804;335805;335806;335807;335808;335809;335810;335811;335812;335813 266254;266255;266256;266257;266258;266259 266256 6 PNEGAIVEVALEGYYK Unmodified 1750.8778 0.87776618 2080 Q02790 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.11 0.416 1 22 4 9 15 3 94.862 90.153 2;3 1.0208E-63 90106 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 218.31 136.83 940540000 523150000 390380000 27011000 0 0 0 0 0 0 0 0 0 0 0 0 40269 2080 35965 335814;335815;335816;335817;335818;335819;335820;335821;335822;335823;335824;335825;335826;335827;335828;335829;335830;335831;335832;335833;335834;335835;335836;335837;335838;335839;335840 266260;266261;266262;266263;266264;266265;266266;266267;266268;266269;266270;266271;266272;266273;266274;266275;266276;266277;266278;266279;266280;266281;266282;266283;266284;266285;266286;266287;266288;266289;266290 266279 21 PNEGIPHSSQTQEQDCLQSQPVSNNEEMAIK Oxidation (M) 3510.5627 0.56273935 2097;913 Q03468;P0DP91 ERCC6 DNA excision repair protein ERCC-6 no no 0 1 0 By MS/MS By matching 10 0 2 1 1 53.45 54.106 3 4.8022E-12 61082 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 43.291 41.783 12128000 0 0 0 0 0 0 0 0 0 0 0 7238000 0 0 4890400 40270 2097;913 35966 335841;335842 266291 266291 1179 1 PNETSPSFSK Unmodified 1092.5088 0.50875357 4047 Q99700 ATXN2 Ataxin-2 yes yes 0 0 0 By MS/MS 2 0 1 1 25.537 21.334 2 0.0065063 28096 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.749 64.901 7666700 0 7666700 0 0 0 0 0 0 0 0 0 0 0 0 0 40271 4047 35967 335843 266292 266292 1 PNEVSSPPTTSAVIPPAVPQAQHLVAQPR Unmodified 2987.5829 0.58286857 3134 Q86TC9 MYPN Myopalladin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.021 79.079 3 8.4341E-37 91203 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 86.131 83.499 124780000 0 0 0 2773300 5156900 16232000 6488700 7456600 12159000 11997000 11215000 13158000 8573200 10088000 19479000 40272 3134 35968 335844;335845;335846;335847;335848;335849;335850;335851;335852;335853;335854;335855 266293;266294;266295;266296;266297;266298;266299;266300;266301;266302;266303;266304;266305;266306 266293 14 PNFAAAWEEVGDTFEK Unmodified 1809.821 0.82097959 4839 Q9UBF2 COPG2 Coatomer subunit gamma-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 94.786 90.114 2 2.7446E-16 112938 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 148.62 135.43 53085000 16335000 35348000 1401900 0 0 0 0 0 0 0 0 0 0 0 0 40273 4839 35969 335856;335857;335858;335859 266307;266308;266309 266307 3 PNFEPPQYPYIPAHITK Unmodified 2011.0203 0.020348097 369 O43809 NUDT21 Cleavage and polyadenylation specificity factor subunit 5 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 79.188 79.219 3 0.012781 91456 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 30.712 26.185 74142000 0 0 0 4934200 2728400 6325600 3240700 14100000 6915800 0 12681000 0 0 0 23216000 40274 369 35970 335860;335861;335862;335863;335864;335865;335866;335867 266310 266310 1 PNFNRTNSPGFQK Unmodified 1505.7375 0.73752473 2786 Q5T8P6 RBM26 RNA-binding protein 26 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 31.447 31.476 3 0.024156 34227 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 33.192 17.605 39999000 0 0 0 4511000 3443400 0 8235400 5510500 7907900 4882800 5507900 0 0 0 0 40275 2786 35971 335868;335869;335870;335871;335872;335873;335874 266311 266311 1 PNFSGNWK Unmodified 948.44537 0.44536545 1247 P29373 CRABP2 Cellular retinoic acid-binding protein 2 yes yes 0 0 0 By MS/MS 10 0 1 1 42.055 41.538 2 0.033366 47043 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 53.754 27.928 5583300 0 0 0 5583300 0 0 0 0 0 0 0 0 0 0 0 40276 1247 35972 335875 266312 266312 1 PNFVVMK Oxidation (M) 849.44186 0.44185998 2831 Q5VZE5 NAA35 N-alpha-acetyltransferase 35, NatC auxiliary subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 34.297 34.48 2 0.015428 37203 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 86.086 66.24 136740000 0 0 0 0 6067100 6835900 0 0 0 25291000 43309000 55237000 0 0 0 40277 2831 35973 335876;335877;335878;335879;335880 266313;266314;266315;266316 266314 4489 3 PNFVVMK Unmodified 833.44695 0.44694536 2831 Q5VZE5 NAA35 N-alpha-acetyltransferase 35, NatC auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 50.653 50.848 2 0.0174 57271 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 114.02 90.228 188810000 0 0 0 0 11220000 0 0 0 0 40439000 64476000 72678000 0 0 0 40278 2831 35973 335881;335882;335883;335884 266317;266318;266319;266320;266321;266322;266323;266324;266325;266326;266327 266320 11 PNGANILVTEENKK Unmodified 1525.81 0.81002097 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 39.046 39.521 3 0.00035019 42655 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.207 37.163 34341000 0 0 0 0 0 0 0 0 6110400 0 8103100 4796800 0 5174100 10157000 40279 3119 35974 335885;335886;335887;335888;335889 266328;266329;266330;266331 266328 4 PNGEKPDEFESGISQALLELEMNSDLK Oxidation (M) 3005.4176 0.41756189 1871 P62081 RPS7 40S ribosomal protein S7 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2.33 0.471 2 1 1 1 1 98.213 93.582 3 1.5921E-104 116988 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 145.6 139.64 61947000 52060000 6154600 3733400 0 0 0 0 0 0 0 0 0 0 0 0 40280 1871 35975 335890;335891;335892 266332;266333;266334 266333 3028 3 PNGEKPDEFESGISQALLELEMNSDLK Unmodified 2989.4226 0.42264727 1871 P62081 RPS7 40S ribosomal protein S7 yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 2 2 2 2 99.209 94.279 3 1.7695E-104 117565 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 145.6 138.65 86745000 56505000 30240000 0 0 0 0 0 0 0 0 0 0 0 0 0 40281 1871 35975 335893;335894;335895;335896 266335;266336;266337;266338 266337 4 PNGFITLPQLGNCEK Unmodified 1686.8399 0.83994089 4758 Q9NZ09 UBAP1 Ubiquitin-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 83.226 83.306 2 0.00099857 96632 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 82.171 8.323 6317700 0 0 0 0 0 0 0 0 0 0 0 0 6317700 0 0 40282 4758 35976 335897;335898;335899;335900 266339;266340;266341;266342 266342 4 PNIEGAPGAPIGNTFQHVQSLPTK Unmodified 2472.2761 0.27612187 614 O94979 SEC31A Protein transport protein Sec31A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76.61 75.891 3 3.6205E-87 87406 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 153.24 137.34 641270000 33907000 0 7502100 8190000 21901000 55046000 23271000 33935000 32736000 75081000 56645000 79530000 32477000 44445000 136600000 40283 614 35977 335901;335902;335903;335904;335905;335906;335907;335908;335909;335910;335911;335912;335913;335914 266343;266344;266345;266346;266347;266348;266349;266350;266351;266352;266353;266354;266355;266356;266357 266346 15 PNIFSYMGTK Unmodified 1156.5587 0.55868065 3950 Q96PZ0 PUS7 Pseudouridylate synthase 7 homolog yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 76.746 76.886 2 0.047878 88294 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.228 29.988 6126400 0 0 0 0 0 1691300 0 0 0 0 0 0 0 0 4435100 40284 3950 35978 335915;335916 266358 266358 1 PNIRWNDVAGLEGAK Unmodified 1638.8478 0.84780346 5026 Q9UN37 VPS4A Vacuolar protein sorting-associated protein 4A yes yes 0 0 1 By MS/MS 2 0 1 1 78.643 70.513 3 0.017036 92857 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.423 39.595 44989000 44989000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40285 5026 35979 335917 266359 266359 0 PNISPSHSRPPGGSDK Unmodified 1631.8016 0.80158155 2558 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.64 1.67 1 21 1 2 2 2 2 1 2 2 2 2 2 2 14.634 14.601 3;4 0.0010007 22582 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.077 32.377 211260000 10378000 0 0 0 12100000 23351000 15617000 16991000 4973400 19049000 19116000 19373000 19641000 20390000 30279000 40286 2558 35980 335918;335919;335920;335921;335922;335923;335924;335925;335926;335927;335928;335929;335930;335931;335932;335933;335934;335935;335936;335937;335938;335939 266360;266361;266362;266363;266364;266365;266366 266362 6 PNISYQQELPDSHLTEEALK Unmodified 2311.1332 0.1332056 3492 Q8TCU4 ALMS1 Alstrom syndrome protein 1 yes yes 0 0 0 By MS/MS 3 0 1 1 78.011 74.592 3 0.044676 89579 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 14.161 10.21 2619900 0 2619900 0 0 0 0 0 0 0 0 0 0 0 0 0 40287 3492 35981 335940 266367 266367 1 PNIVLFSGSSHQDLSQR Unmodified 1883.949 0.94897407 957 P11908 PRPS2 Ribose-phosphate pyrophosphokinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 67.983 68.116 3 5.0559E-14 77300 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.404 72.29 92912000 0 0 0 2340600 0 12864000 5213100 5968600 5547100 7417400 7760000 12217000 5208000 5256500 23121000 40288 957 35982 335941;335942;335943;335944;335945;335946;335947;335948;335949;335950;335951 266368;266369;266370;266371;266372;266373;266374;266375;266376;266377;266378;266379 266371 12 PNLADLAVYGVLR Unmodified 1399.7823 0.78234966 4441 Q9H7Z7 PTGES2 Prostaglandin E synthase 2;Prostaglandin E synthase 2 truncated form yes yes 0 0 0 By MS/MS 10 0 1 1 91.608 91.726 2 0.0044728 106531 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 61.353 39.267 973990 0 0 0 0 0 0 0 0 0 973990 0 0 0 0 0 40289 4441 35983 335952 266380 266380 1 PNLDLLEQQHQLIQEALIFDNK Unmodified 2618.3704 0.37041618 356 O43707 ACTN4 Alpha-actinin-4 yes yes 0 0 0 By MS/MS 3 0 1 1 97.275 93.967 3 9.276E-85 112671 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 147.21 140.1 10765000 0 10765000 0 0 0 0 0 0 0 0 0 0 0 0 0 40290 356 35984 335953 266381;266382 266381 2 PNLGAIAEYK Unmodified 1074.571 0.5709599 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59.564 59.052 2 0.00091114 66234 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 114.97 87.086 350190000 0 14417000 35034000 14238000 13099000 32129000 15298000 16779000 17341000 32476000 32320000 28604000 29681000 23616000 45154000 40291 4634 35985 335954;335955;335956;335957;335958;335959;335960;335961;335962;335963;335964;335965;335966;335967 266383;266384;266385;266386;266387;266388;266389;266390;266391;266392;266393;266394;266395 266386 12 PNLNLQVLSNPEFLAEGTAIK Unmodified 2267.2161 0.21614737 425 O60701 UGDH UDP-glucose 6-dehydrogenase yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 97.45 93.425 3 3.1654E-10 115342 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 56.428 48.889 22370000 0 22370000 0 0 0 0 0 0 0 0 0 0 0 0 0 40292 425 35986 335968;335969 266396 266396 1 PNMVTPGHACTQK Unmodified 1439.665 0.66495341 771 P04075 ALDOA Fructose-bisphosphate aldolase A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.37 3.17 3 1 15 1 2 1 1 1 1 1 1 1 1 2 1 1 2 2 20.471 19.828 2;3 1.1576E-12 19040 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 131.83 120.67 10108000000 4542500000 2888700000 1942200000 46565000 8914400 18835000 10747000 15340000 12688000 15472000 127090000 69053000 16366000 91749000 302020000 40293 771 35987 335970;335971;335972;335973;335974;335975;335976;335977;335978;335979;335980;335981;335982;335983;335984;335985;335986;335987;335988 266397;266398;266399;266400;266401;266402;266403;266404;266405;266406;266407;266408;266409;266410;266411;266412;266413;266414;266415;266416;266417;266418;266419;266420;266421;266422;266423;266424;266425;266426;266427;266428 266408 31 PNMVTPGHACTQK Oxidation (M) 1455.6599 0.65986803 771 P04075 ALDOA Fructose-bisphosphate aldolase A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 3.65 3.15 37 4 10 16 18 7 1 1 1 1 1 1 2 1 1 15.929 13.038 2;3 1.2759E-19 12024 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 133.16 125.78 6679200000 3459600000 2443100000 666700000 10448000 3216400 0 0 3997900 0 3767200 4213100 2024300 6106300 18189000 57844000 40294 771 35987 335989;335990;335991;335992;335993;335994;335995;335996;335997;335998;335999;336000;336001;336002;336003;336004;336005;336006;336007;336008;336009;336010;336011;336012;336013;336014;336015;336016;336017;336018;336019;336020;336021;336022;336023;336024;336025;336026;336027;336028;336029;336030;336031;336032;336033;336034;336035;336036;336037;336038;336039 266429;266430;266431;266432;266433;266434;266435;266436;266437;266438;266439;266440;266441;266442;266443;266444;266445;266446;266447;266448;266449;266450;266451;266452;266453;266454;266455;266456;266457;266458;266459;266460;266461;266462;266463;266464;266465;266466;266467;266468;266469;266470;266471;266472;266473;266474 266467 924 44 PNNETGDITRNEIIQSPISQVPSVEK Unmodified 2864.4516 0.45157963 3086 Q7Z3T8 ZFYVE16 Zinc finger FYVE domain-containing protein 16 yes yes 0 0 1 By MS/MS 2 0 1 1 81.587 76.882 3 2.2395E-78 95623 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 135.8 131.32 33859000 0 33859000 0 0 0 0 0 0 0 0 0 0 0 0 0 40295 3086 35988 336040 266475 266475 1 PNNLLLDENGVLK Unmodified 1437.7827 0.78274359 1633 P50613 CDK7 Cyclin-dependent kinase 7 yes yes 0 0 0 By MS/MS 2 0 1 1 81.41 76.705 2 0.0096029 95401 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.286 57.541 34013000 0 34013000 0 0 0 0 0 0 0 0 0 0 0 0 0 40296 1633 35989 336041 266476 266476 1 PNNLSLVVHGPGDLR Unmodified 1586.8529 0.85288884 2045 Q00796 SORD Sorbitol dehydrogenase yes yes 0 0 0 By MS/MS 10 0 1 1 69.335 69.801 3 0.034749 79589 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.857 29.802 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40297 2045 35990 336042 266477 266477 1 PNNSYMFK Unmodified 999.4484 0.44840192 3171;2918 Q86VQ1;Q6P1L5 GLCCI1;FAM117B Glucocorticoid-induced transcript 1 protein;Protein FAM117B no no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 36.718 36.953 2 0.049796 40761 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 46.994 36.856 47807000 0 0 0 0 2883300 3808500 0 4533700 3366000 7098900 0 6809600 4917000 5150600 9239100 40298 3171;2918 35991 336043;336044;336045;336046;336047;336048;336049;336050;336051 266478 266478 1 PNPASPLPASPYGGPTPASYTTASTPAGPAFPVQVK Unmodified 3492.7565 0.75653542 2563 Q15654 TRIP6 Thyroid receptor-interacting protein 6 yes yes 0 0 0 By MS/MS 10 0 1 1 87.715 87.865 3 5.9544E-15 101610 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.857 33.645 3304600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3304600 40299 2563 35992 336052 266479 266479 1 PNPNQIISVGSK Unmodified 1252.6776 0.67755023 583 O94776 MTA2 Metastasis-associated protein MTA2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 52.807 51.666 2 1.2021E-08 58280 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 138.36 107.62 668010000 16746000 164670000 0 24607000 20154000 58846000 25022000 30523000 41354000 42646000 41937000 53856000 41753000 39230000 66670000 40300 583 35993 336053;336054;336055;336056;336057;336058;336059;336060;336061;336062;336063;336064;336065;336066;336067 266480;266481;266482;266483;266484;266485;266486;266487;266488;266489;266490;266491;266492;266493;266494;266495;266496 266487 17 PNPNQISVNNVK Unmodified 1322.6943 0.69426293 2272 Q13330 MTA1 Metastasis-associated protein MTA1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 39.396 38.904 2 0.0050225 43631 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 55.649 40.982 34029000 0 11448000 0 0 0 4163600 0 0 3172500 1891700 0 0 3529000 4319200 5504900 40301 2272 35994 336068;336069;336070;336071;336072;336073;336074 266497;266498 266497 2 PNQQDIVFFEK Unmodified 1363.6772 0.67721588 624 O95163 IKBKAP Elongator complex protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 73.557 73.606 2 1.9741E-05 84813 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 124.42 104.28 69948000 0 0 0 4608700 0 12497000 0 0 0 13110000 0 13746000 7216000 0 18770000 40302 624 35995 336075;336076;336077;336078;336079;336080;336081;336082 266499;266500;266501;266502;266503;266504;266505;266506 266499 7 PNSALDFLK Unmodified 1003.5338 0.53384611 4005 Q99417 MYCBP C-Myc-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.24 2 1 10 1 2 1 1 1 1 1 1 1 1 1 1 75.939 74.659 2 0.00076451 93877 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 146.27 110.39 197120000 6315700 91667000 0 5374800 0 13111000 5664500 0 10028000 10293000 11234000 11799000 0 12854000 18777000 40303 4005 35996 336083;336084;336085;336086;336087;336088;336089;336090;336091;336092;336093;336094;336095 266507;266508;266509;266510;266511;266512;266513;266514;266515;266516;266517;266518 266510 12 PNSLDQFK Unmodified 947.47125 0.47124585 3895 Q96JJ3 ELMO2 Engulfment and cell motility protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 40.597 35.544 2 0.028423 46361 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.14 71.585 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40304 3895 35997 336096 266519 266519 1 PNSMDTANTSPFK Unmodified 1408.6293 0.62927941 4938 Q9UJF2 RASAL2 Ras GTPase-activating protein nGAP yes yes 0 0 0 By MS/MS 2 0 1 1 47.672 42.109 2 0.0058413 54770 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.692 65.339 10538000 0 10538000 0 0 0 0 0 0 0 0 0 0 0 0 0 40305 4938 35998 336097 266520 266520 1 PNSNQVNLASCCVMPPDLTAFAK Unmodified 2533.1763 0.17634952 1541 P48507 GCLM Glutamate--cysteine ligase regulatory subunit yes yes 0 0 0 By MS/MS 2 0 1 1 92.575 87.664 3 0.0044133 108818 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 30.488 26.777 21547000 0 21547000 0 0 0 0 0 0 0 0 0 0 0 0 0 40306 1541 35999 336098 266521 266521 1 PNSPSISPSILSNTEHK Unmodified 1806.9112 0.91119158 4047 Q99700 ATXN2 Ataxin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 63.492 61.995 3 5.6326E-19 70580 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 72.489 61.434 129230000 31431000 39341000 5768800 3956800 3386400 7857800 4572900 5358100 7283800 7152000 7190800 0 0 5931300 0 40307 4047 36000 336099;336100;336101;336102;336103;336104;336105;336106;336107;336108;336109;336110;336111 266522;266523;266524;266525;266526;266527;266528;266529;266530;266531;266532;266533 266523 12 PNSTPVGPSSSK Unmodified 1156.5724 0.57241646 2928 Q6P2H3 CEP85 Centrosomal protein of 85 kDa yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.973 14.128 2 3.88E-08 12866 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 123.79 78.711 38189000 0 0 0 1559000 2105600 3130900 3324300 1851100 2402100 4336000 5087800 3447200 3028300 0 7916800 40308 2928 36001 336112;336113;336114;336115;336116;336117;336118;336119;336120;336121;336122;336123 266534;266535;266536;266537;266538;266539;266540;266541;266542;266543 266537 10 PNTLTLVHVR Unmodified 1148.6666 0.66659162 533 O75694 NUP155 Nuclear pore complex protein Nup155 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 2 1 1 2 2 2 2 1 1 52.088 52.402 3 0.014198 59158 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 39.148 27.615 280970000 0 0 0 0 0 46691000 10121000 10649000 0 47631000 44742000 49427000 44601000 12266000 14843000 40309 533 36002 336124;336125;336126;336127;336128;336129;336130;336131;336132;336133;336134;336135;336136;336137 266544;266545 266544 2 PNTSVQFLR Unmodified 1060.5665 0.56654322 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 53.228 53.265 2 0.0031541 60106 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 92.439 63.927 761230000 0 0 0 35175000 26535000 110430000 35837000 47356000 36651000 144560000 0 0 0 108200000 216480000 40310 1565 36003 336138;336139;336140;336141;336142;336143;336144;336145;336146 266546;266547;266548;266549;266550;266551;266552;266553;266554;266555 266546 10 PNVDPQPWFQDGPK Unmodified 1623.7682 0.76815616 4885 Q9UGP4 LIMD1 LIM domain-containing protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 74.787 74.219 2 1.8125E-06 92237 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.05 75.533 60132000 0 29850000 0 0 1533900 0 2567900 0 5320700 0 5275200 5480100 0 0 10104000 40311 4885 36004 336147;336148;336149;336150;336151;336152;336153 266556;266557;266558;266559;266560;266561;266562 266557 5 PNVGCQQDSEELLK Unmodified 1615.7512 0.75118546 3 A0AVT1 UBA6 Ubiquitin-like modifier-activating enzyme 6 yes yes 0 0 0 By MS/MS 2 0 1 1 53.039 47.247 2 8.9537E-67 61171 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 203.39 165.09 50573000 0 50573000 0 0 0 0 0 0 0 0 0 0 0 0 0 40312 3 36005 336154 266563 266563 1 PNVIVVQK Unmodified 895.5491 0.54910224 3105 Q7Z589 EMSY Protein EMSY yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 2 2 2 2 2 2 2 1 2 2 1 40.221 40.375 2 0.010495 40096 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 79.469 51.362 3240700000 0 0 0 390540000 251760000 233890000 280210000 275700000 177600000 296680000 400170000 540660000 184830000 204130000 4531500 40313 3105 36006 336155;336156;336157;336158;336159;336160;336161;336162;336163;336164;336165;336166;336167;336168;336169;336170;336171;336172;336173;336174;336175 266564;266565;266566;266567;266568;266569;266570;266571;266572;266573;266574;266575;266576;266577;266578;266579;266580 266566 17 PNVLLPPK Unmodified 876.54329 0.54328858 2895 Q6N069 NAA16 N-alpha-acetyltransferase 16, NatA auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.5 1.94 1 15 1 1 1 1 2 2 3 2 2 1 50.319 49.863 2 0.00025157 56391 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 152.63 119.28 369940000 0 20955000 0 11122000 21492000 16753000 23613000 28244000 37507000 44922000 74311000 91018000 0 0 0 40314 2895 36007 336176;336177;336178;336179;336180;336181;336182;336183;336184;336185;336186;336187;336188;336189;336190;336191 266581;266582;266583;266584;266585;266586;266587;266588;266589;266590;266591;266592;266593;266594;266595;266596;266597;266598;266599;266600;266601;266602;266603;266604;266605;266606;266607;266608;266609;266610 266584 30 PNVSASTQASR Unmodified 1116.5523 0.55234972 2269 Q13315 ATM Serine-protein kinase ATM yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 11.717 11.846 2 0.0077188 11059 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 53.327 28.433 8953200 0 0 0 970060 0 2223600 0 0 0 0 0 0 1643700 1825800 2290100 40315 2269 36008 336192;336193;336194;336195;336196 266611;266612;266613;266614;266615 266611 4 PNVYANR Unmodified 832.41915 0.4191507 1146 P22735 TGM1 Protein-glutamine gamma-glutamyltransferase K yes yes 0 0 0 By MS/MS 10 0 1 1 12.761 12.625 2 0.023574 11642 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 92.692 74.926 9587700 0 0 0 9587700 0 0 0 0 0 0 0 0 0 0 0 40316 1146 36009 336197 266616 266616 1 PNYGCQVTIQSEQEK Unmodified 1779.8098 0.80976297 3320 Q8N3C0 ASCC3 Activating signal cointegrator 1 complex subunit 3 yes yes 0 0 0 By MS/MS 2 0 1 1 45.625 40.304 2 0.00013495 52392 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.565 66.026 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40317 3320 36010 336198 266617 266617 1 PNYIVPDYMPVVYDK Unmodified 1811.8804 0.88040872 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 87.627 86.26 2 1.7813E-31 107170 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 132.99 119.02 596500000 4911800 515600000 5278900 0 4582900 4183900 0 4439100 3175100 9378200 6012100 7547900 0 7547900 23846000 40318 2392 36011 336199;336200;336201;336202;336203;336204;336205;336206;336207;336208;336209;336210;336211 266618;266619;266620;266621;266622;266623;266624;266625;266626;266627;266628;266629;266630 266620 13 PNYIVPDYMPVVYDK Oxidation (M) 1827.8753 0.87532334 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 79.626 79.15 2 0.0008512 91564 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 56.087 36.056 154440000 0 0 6538500 29141000 20539000 0 0 32342000 0 32558000 0 0 0 33320000 0 40319 2392 36011 336212;336213;336214;336215;336216;336217;336218 266631;266632;266633;266634;266635;266636;266637 266637 3915 6 PPAPPSLPAGPPGVK Unmodified 1380.7765 0.776536 2534 Q15428 SF3A2 Splicing factor 3A subunit 2 yes yes 0 0 0 By MS/MS 10 0 1 1 68.158 68.121 2 0.0068036 78403 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 40.616 31.703 3439000 0 0 0 0 0 3439000 0 0 0 0 0 0 0 0 0 40320 2534 36012 336219 266638 266638 1 PPGAEPPSAAAKGR Unmodified 1304.6837 0.68369824 5191 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 23.447 23.593 2 0.04939 25229 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 53.756 31.07 44154000 0 0 0 3422000 2747500 2577500 4578100 4267600 2548800 5659300 4640400 9810300 3902500 0 0 40321 5191 36013 336220;336221;336222;336223;336224;336225;336226;336227;336228;336229 266639 266639 1 PPPQGDVTALFLGPPGLGK Unmodified 1860.0145 0.014534437 3606 Q8WZA9 IRGQ Immunity-related GTPase family Q protein yes yes 0 0 0 By MS/MS By MS/MS 5 3.56 1 1 1 2 1 93.96 91.284 3 0.0024367 108980 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 39.863 37.946 17244000 0 15461000 0 0 0 1783700 0 0 0 0 0 0 0 0 0 40322 3606 36014 336230;336231;336232 266640;266641;266642;266643 266642 4 PPPRQGYPEGYYSSK Unmodified 1724.8158 0.81583463 242 O15027 SEC16A Protein transport protein Sec16A yes yes 0 0 1 By MS/MS 3 0 1 1 44.467 39.661 3 0.03485 49174 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 23.008 15.599 5770700 0 5770700 0 0 0 0 0 0 0 0 0 0 0 0 0 40323 242 36015 336233 266644 266644 1 PPQGTDSIK Unmodified 941.48181 0.48181054 4912 Q9UHX1 PUF60 Poly(U)-binding-splicing factor PUF60 yes yes 0 0 0 By MS/MS 2 0 1 1 47.357 39.879 2 0.0062003 55188 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 105.52 44.876 4174900 4174900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40324 4912 36016 336234 266645 266645 1 PPYTVVYFPVR Unmodified 1336.718 0.71795849 879 P09211 GSTP1 Glutathione S-transferase P yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 83.392 83.384 2 0.00042177 96860 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 85.862 76.081 33991000 0 0 0 12302000 2050500 2483900 2008000 11792000 0 0 3354200 0 0 0 0 40325 879 36017 336235;336236;336237;336238;336239;336240 266646;266647;266648;266649;266650 266649 5 PQALLDK Unmodified 783.44905 0.44905385 3735 Q96AC1 FERMT2 Fermitin family homolog 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 27.392 23.711 2 0.033392 31573 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 146.54 67.074 342460000 0 336300000 6159400 0 0 0 0 0 0 0 0 0 0 0 0 40326 3735 36018 336241;336242 266651 266651 0 PQANVPSALPSLPAGSGLK Unmodified 1802.989 0.98904797 4871 Q9UEE9 CFDP1 Craniofacial development protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 83.447 78.727 2 1.6093E-06 97937 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.992 67.459 17301000 0 17301000 0 0 0 0 0 0 0 0 0 0 0 0 0 40327 4871 36019 336243 266652 266652 1 PQAPATVGLAFR Unmodified 1226.6772 0.6771563 2523 Q15370 TCEB2 Transcription elongation factor B polypeptide 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.496 69.571 2 0.00047903 79642 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 79.148 34.067 168250000 0 0 0 7869000 5837400 7992600 10367000 6639800 5448200 10235000 21232000 20786000 11466000 17372000 43009000 40328 2523 36020 336244;336245;336246;336247;336248;336249;336250;336251;336252;336253;336254;336255 266653;266654;266655;266656;266657;266658;266659;266660;266661;266662;266663;266664 266662 11 PQAPPSQPLPQTQAK Unmodified 1586.8417 0.84165545 2651 Q2M2I8 AAK1 AP2-associated protein kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 37.561 37.689 2 0.00089044 41631 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 76.522 62.753 52169000 0 0 0 2926300 2892700 5545000 4195800 3785200 4406100 5403600 5912200 0 5093900 5236400 6771300 40329 2651 36021 336256;336257;336258;336259;336260;336261;336262;336263;336264;336265;336266 266665;266666;266667;266668;266669;266670;266671;266672;266673;266674;266675 266666 11 PQATPLPGDALDQK Unmodified 1449.7464 0.74635808 3657 Q92766 RREB1 Ras-responsive element-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.557 55.686 2 9.2861E-08 63168 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 113.63 107.67 158850000 0 0 0 10426000 8591600 14295000 9463300 10348000 11028000 15045000 14603000 17683000 13490000 14035000 19838000 40330 3657 36022 336267;336268;336269;336270;336271;336272;336273;336274;336275;336276;336277;336278 266676;266677;266678;266679;266680;266681;266682;266683;266684;266685;266686;266687;266688 266676 13 PQATSAPSPAPK Unmodified 1150.5982 0.59823728 35 A8CG34;Q96HA1;A6NF01 POM121C;POM121;POM121B Nuclear envelope pore membrane protein POM 121C;Nuclear envelope pore membrane protein POM 121;Putative nuclear envelope pore membrane protein POM 121B yes no 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 17.214 17.402 2 0.0052016 17344 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 55.064 43.295 8897600 0 0 0 0 917060 2289500 0 0 1299300 0 0 2437000 0 0 1954800 40331 35 36023 336279;336280;336281;336282;336283;336284 266689;266690;266691;266692;266693 266692 5 PQAVATEQAQGELK Unmodified 1468.7522 0.75217174 5362 yes yes 0 0 0 By MS/MS 2 0 1 1 20.845 16.121 3 0.0015538 23330 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.28 24.22 + 5774400 5774400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40332 5362 36024 336285 266694 266694 1 PQDSGSSANEQAVQ Unmodified 1416.6117 0.61171509 2523 Q15370 TCEB2 Transcription elongation factor B polypeptide 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.685 13.848 2 3.8852E-19 12587 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 160.36 148.14 81014000 0 0 0 2216100 2476700 8005300 3778100 0 4519800 5052300 7768400 8572800 5610400 7433300 25581000 40333 2523 36025 336286;336287;336288;336289;336290;336291;336292;336293;336294;336295;336296;336297 266695;266696;266697;266698;266699;266700;266701;266702;266703;266704;266705 266698 11 PQEAAVAPEKPPASDETK Unmodified 1863.9214 0.92142191 1256 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.59 2 1 20 1 2 1 1 1 1 2 2 2 2 2 2 2 2 29.402 28.971 2;3 1.6471E-37 31850 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 126.8 120.38 2857200000 14255000 506550000 0 60072000 76583000 99253000 80416000 100710000 80907000 285130000 405110000 383870000 153920000 140030000 470440000 40334 1256 36026 336298;336299;336300;336301;336302;336303;336304;336305;336306;336307;336308;336309;336310;336311;336312;336313;336314;336315;336316;336317;336318;336319;336320 266706;266707;266708;266709;266710;266711;266712;266713;266714;266715;266716;266717;266718;266719;266720;266721;266722;266723;266724;266725;266726;266727;266728;266729;266730;266731;266732;266733;266734;266735;266736;266737;266738;266739;266740;266741;266742;266743;266744;266745 266712 40 PQEAVYGQNDIHHK Unmodified 1634.7801 0.78011783 5028 Q9UN86 G3BP2 Ras GTPase-activating protein-binding protein 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 20.807 20.125 3 0.016722 25386 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 45.207 33.945 37841000 0 4602600 14998000 0 0 0 0 0 4784600 0 3645600 3573000 0 2792300 3445100 40335 5028 36027 336321;336322;336323;336324;336325;336326;336327 266746;266747 266747 1 PQEVQTSRNVESIAEQMENPDLK Unmodified 2641.2654 0.26535876 3808 Q96EB6 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment yes yes 0 0 1 By MS/MS 2 0 1 1 78.732 76.104 3 0.0001094 92528 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 63.184 55.907 6509800 0 0 6509800 0 0 0 0 0 0 0 0 0 0 0 0 40336 3808 36028 336328 266748 266748 1 PQGAPETLK Unmodified 939.50255 0.50254598 2368 Q14119 VEZF1 Vascular endothelial zinc finger 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 20.308 20.184 2 0.0032531 20600 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 90.657 50.554 229130000 0 15220000 0 9441600 9179300 20964000 14665000 11924000 17856000 23448000 22708000 18589000 21252000 17549000 26332000 40337 2368 36029 336329;336330;336331;336332;336333;336334;336335;336336;336337;336338;336339;336340;336341 266749;266750;266751;266752;266753;266754;266755;266756;266757;266758;266759;266760;266761 266754 12 PQGIPVAALLEPDEVLK Unmodified 1788.0033 0.003301049 1794 P57678 GEMIN4 Gem-associated protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 94.282 94.401 2 0.0057074 109734 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 38.634 29.446 3894800 0 0 0 0 0 0 0 0 0 977030 0 0 778330 854550 1284900 40338 1794 36030 336342;336343;336344;336345;336346 266762;266763;266764 266762 3 PQGPAFPEPGTATGSGIK Unmodified 1710.8577 0.85769944 4048 Q99704 DOK1 Docking protein 1 yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 66.776 61.941 2 0.0017349 79460 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.527 53.273 30589000 0 26798000 3791000 0 0 0 0 0 0 0 0 0 0 0 0 40339 4048 36031 336347;336348 266765 266765 0 PQGPPQQGGHPPPPQGR Unmodified 1730.8601 0.86009948 767 P02810 PRH1 Salivary acidic proline-rich phosphoprotein 1/2;Salivary acidic proline-rich phosphoprotein 1/2;Salivary acidic proline-rich phosphoprotein 3/4;Peptide P-C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 18.726 18.914 3 5.807E-08 19381 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 59.261 47.06 115230000 0 0 0 9378600 9926300 6698400 18913000 17976000 4599300 6046800 7679700 18504000 7312100 0 8196200 40340 767 36032 336349;336350;336351;336352;336353;336354;336355;336356;336357;336358;336359 266766;266767;266768;266769;266770;266771;266772;266773;266774;266775;266776;266777;266778;266779 266778 11 PQGPPQQGGHPRPPR Unmodified 1604.8284 0.82840542 767 P02810 PRH1 Salivary acidic proline-rich phosphoprotein 1/2;Salivary acidic proline-rich phosphoprotein 1/2;Salivary acidic proline-rich phosphoprotein 3/4;Peptide P-C yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 2 2 1 2 2 1 2 2 2 14.265 14.422 3;4 0.0020328 13725 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 42.317 21.654 202840000 0 0 0 20628000 21402000 2671000 25234000 43375000 0 3304500 26220000 33347000 0 0 26654000 40341 767 36033 336360;336361;336362;336363;336364;336365;336366;336367;336368;336369;336370;336371;336372;336373;336374;336375 266780;266781;266782;266783;266784;266785;266786;266787 266783 2 PQIIAHIQK Unmodified 1046.6237 0.62366417 3929 Q96MX6 WDR92 WD repeat-containing protein 92 yes yes 0 0 0 By MS/MS 2 0 1 1 43.219 36.426 2 0.018209 50250 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.923 52.833 18162000 18162000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40342 3929 36034 336376 266788 266788 1 PQISAAQSTQPQK Unmodified 1382.7154 0.7153923 2779 Q5T6F2 UBAP2 Ubiquitin-associated protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22.18 22.054 2 2.7125E-101 23036 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 278.37 250.54 553780000 0 18694000 0 32710000 22528000 33440000 49639000 36736000 47843000 61966000 47830000 46068000 46207000 47914000 62203000 40343 2779 36035 336377;336378;336379;336380;336381;336382;336383;336384;336385;336386;336387;336388;336389;336390 266789;266790;266791;266792;266793;266794;266795;266796;266797;266798;266799;266800;266801;266802 266790 5 PQITNPK Unmodified 796.4443 0.44430282 5123 Q9Y2W2 WBP11 WW domain-binding protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 13.836 13.122 2 0.015825 12823 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 117.18 72.757 498530000 13891000 292860000 3275400 10362000 13816000 19156000 16635000 13436000 16202000 16102000 20174000 16025000 18432000 16665000 11495000 40344 5123 36036 336391;336392;336393;336394;336395;336396;336397;336398;336399;336400;336401;336402;336403;336404;336405;336406 266803;266804;266805;266806;266807;266808;266809;266810 266803 5 PQLQGIPVLVLGNK Unmodified 1474.8871 0.88714908 3759 Q96BM9 ARL8A ADP-ribosylation factor-like protein 8A no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 88.534 88.605 2 0.00043961 102647 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 92.538 88.384 63571000 0 0 0 1460000 2219700 8682800 2432700 3957000 5664300 6918300 4716500 5885500 3992100 3679200 13963000 40345 3759 36037 336407;336408;336409;336410;336411;336412;336413;336414;336415;336416;336417;336418 266811;266812;266813;266814;266815;266816;266817;266818;266819;266820;266821;266822 266811 12 PQNAPEGYQNR Unmodified 1272.5847 0.58471248 2196 Q12834 CDC20 Cell division cycle protein 20 homolog yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 14.982 15.045 2 0.014836 14722 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 45.161 39.795 2392300 0 0 0 0 0 1071700 0 0 1320600 0 0 0 0 0 0 40346 2196 36038 336419;336420 266823 266823 1 PQNLLIDDK Unmodified 1054.5659 0.56587452 822 P06493 CDK1 Cyclin-dependent kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 47.043 46.02 2 0.0021179 58563 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.89 82.594 134690000 0 41111000 0 3661700 4197100 28018000 4387600 0 9353400 12833000 0 0 9202100 0 21925000 40347 822 36039 336421;336422;336423;336424;336425;336426;336427;336428;336429;336430;336431;336432;336433 266824;266825;266826;266827;266828;266829;266830;266831;266832;266833;266834;266835;266836;266837 266827 14 PQNLLINER Unmodified 1095.6037 0.60365701 2037;2132 Q00536;Q07002 CDK16;CDK18 Cyclin-dependent kinase 16;Cyclin-dependent kinase 18 no no 0 0 0 By MS/MS 10 0 1 1 47.532 47.589 2 0.0072675 53708 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 72.879 37.584 4045500 0 0 0 0 0 4045500 0 0 0 0 0 0 0 0 0 40348 2037;2132 36040 336434 266838 266838 1 PQNLLINTEGAIK Unmodified 1409.7878 0.78782897 1180 P24941 CDK2 Cyclin-dependent kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching 8 3.46 1 3 1 1 1 1 72.431 71.366 2 4.3779E-22 89517 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 147.62 124.3 49898000 0 37528000 0 0 0 5506800 0 0 2106600 0 0 0 0 0 4756400 40349 1180 36041 336435;336436;336437;336438 266839;266840 266840 2 PQNLLLDPDTAVLK Unmodified 1535.8559 0.85590853 1605 P49841 GSK3B Glycogen synthase kinase-3 beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 83.322 82.889 2 0.00039096 96061 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 72.652 48.801 54639000 0 26536000 0 1083000 1127500 4265800 1687500 2575300 2056800 0 3844500 2927200 0 0 8536100 40350 1605 36042 336439;336440;336441;336442;336443;336444;336445;336446;336447;336448 266841;266842;266843;266844;266845;266846;266847 266845 7 PQNLLVDPDTAVLK Unmodified 1521.8403 0.84025847 1604 P49840 GSK3A Glycogen synthase kinase-3 alpha yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 79.816 79.194 2 0.00065586 91601 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 79.82 60.058 59315000 0 38655000 0 0 1568300 4665500 0 0 0 3893000 3316800 0 0 2166000 5050200 40351 1604 36043 336449;336450;336451;336452;336453;336454;336455 266848;266849;266850 266848 3 PQPAPQAGPIPVAPIGTLK Unmodified 1851.0618 0.061818981 3706 Q93052 LPP Lipoma-preferred partner yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 2 2 2 2 2 2 82.018 82.108 2;3 0.00010665 95027 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 61.212 48.852 95736000 0 0 0 2624000 0 4925000 3298400 3307000 4989400 8914600 13030000 13300000 3436700 10495000 27416000 40352 3706 36044 336456;336457;336458;336459;336460;336461;336462;336463;336464;336465;336466;336467;336468;336469;336470;336471;336472;336473;336474;336475;336476;336477 266851;266852;266853;266854;266855;266856;266857;266858;266859 266851 9 PQPDAATALAITADSETLPESEK Unmodified 2354.1489 0.14891525 3680 Q92889 ERCC4 DNA repair endonuclease XPF yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.83 2.61 1 5 1 1 1 1 1 1 81.052 80.532 3 1.1094E-67 95237 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 134.66 126.16 34489000 0 13942000 0 0 1866400 4449000 0 0 0 4949100 4442000 0 0 4840300 0 40353 3680 36045 336478;336479;336480;336481;336482;336483 266860;266861;266862;266863;266864;266865 266863 6 PQPPVAEATPR Unmodified 1161.6142 0.6142217 4898 Q9UHD8 SEPT9 Septin-9 yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 32.92 33.067 2 0.042405 36016 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 38.75 11.496 9079600 0 0 0 0 0 3678900 0 0 3165300 0 0 0 0 2235400 0 40354 4898 36046 336484;336485;336486 266866 266866 1 PQPQPSPLLSTHHTQEEDISSK Unmodified 2455.1979 0.19793112 2653 Q2NKX8 ERCC6L DNA excision repair protein ERCC-6-like yes yes 0 0 0 By MS/MS 2 0 1 1 50.617 46.696 4 0.00075943 58764 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 53.779 45.465 6946600 0 0 6946600 0 0 0 0 0 0 0 0 0 0 0 0 40355 2653 36047 336487 266867;266868 266868 2 PQQAAGMLSPK Oxidation (M) 1142.5754 0.57539335 2289 Q13428 TCOF1 Treacle protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 19.342 19.224 2 2.0444E-06 23531 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.27 71.176 171470000 0 48291000 0 8072300 8169800 11908000 8470400 7026700 8084400 13004000 10633000 16428000 12572000 6359000 12456000 40356 2289 36048 336488;336489;336490;336491;336492;336493;336494;336495;336496;336497;336498;336499;336500 266869;266870;266871;266872;266873;266874;266875;266876;266877;266878;266879;266880;266881;266882 266872 3729 13 PQQAAGMLSPK Unmodified 1126.5805 0.58047873 2289 Q13428 TCOF1 Treacle protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34.447 33.776 2 2.4248E-07 37498 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 144.77 116.6 333700000 8148300 140220000 0 5722000 10263000 10968000 9121100 12003000 9467100 17638000 27777000 25932000 16996000 14434000 25004000 40357 2289 36048 336501;336502;336503;336504;336505;336506;336507;336508;336509;336510;336511;336512;336513;336514 266883;266884;266885;266886;266887;266888;266889;266890;266891;266892;266893;266894;266895;266896;266897;266898;266899;266900 266899 18 PQQIQALMDEVTK Oxidation (M) 1515.7603 0.76029359 1779 P56192 MARS Methionine--tRNA ligase, cytoplasmic yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching 7.06 3.8 5 1 10 1 3 2 1 1 1 1 1 1 1 1 1 1 61.207 59.289 2 3.7249E-07 67428 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 95.618 67.441 295540000 4630900 202410000 6806500 3546200 0 8764800 6043000 0 6044900 9740500 9857300 10714000 6672300 8410900 11899000 40358 1779 36049 336515;336516;336517;336518;336519;336520;336521;336522;336523;336524;336525;336526;336527;336528;336529;336530 266901;266902;266903;266904;266905;266906;266907;266908;266909;266910;266911;266912;266913;266914 266902 2906 14 PQQIQALMDEVTK Unmodified 1499.7654 0.76537896 1779 P56192 MARS Methionine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.11 3.8 6 1 12 2 3 2 1 1 1 1 1 1 1 1 1 1 1 1 82.661 80.912 2;3 4.4957E-181 100726 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 253.76 209.41 1537300000 21168000 1346800000 8743300 2229100 4340500 14376000 4964100 11224000 7472400 17504000 14648000 16190000 7154700 15895000 44582000 40359 1779 36049 336531;336532;336533;336534;336535;336536;336537;336538;336539;336540;336541;336542;336543;336544;336545;336546;336547;336548;336549 266915;266916;266917;266918;266919;266920;266921;266922;266923;266924;266925;266926;266927;266928;266929;266930;266931;266932;266933 266919 19 PQQQAPAMK Unmodified 997.5015 0.50150012 3631 Q92576 PHF3 PHD finger protein 3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 12.992 13.147 2 0.0036202 12384 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 95.352 57.794 27566000 0 0 0 2115600 2056500 2439200 1902500 1563200 3356700 0 2277400 2998900 3191800 3393300 2270700 40360 3631 36050 336550;336551;336552;336553;336554;336555;336556;336557;336558;336559;336560 266934;266935;266936;266937;266938;266939;266940 266934 7 PQREGGGNNLYGEEMVQALK Unmodified 2189.0535 0.053515494 1547 P48637 GSS Glutathione synthetase yes yes 0 0 1 By MS/MS 2 0 1 1 75.463 72.615 3 0.020396 88565 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 27.924 21.151 5612500 0 0 5612500 0 0 0 0 0 0 0 0 0 0 0 0 40361 1547 36051 336561 266941 266941 1 PQSHELK Unmodified 837.43447 0.43446642 3225 Q8IVD9 NUDCD3 NudC domain-containing protein 3 yes yes 0 0 0 By MS/MS 2 0 1 1 1.8134 -1.4315 2 0.011851 1336 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.02 74.338 13593000 0 13593000 0 0 0 0 0 0 0 0 0 0 0 0 0 40362 3225 36052 336562 266942;266943;266944;266945;266946 266944 5 PQSHSLSTSGK Unmodified 1127.5571 0.55710075 4778 Q9NZN5 ARHGEF12 Rho guanine nucleotide exchange factor 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 7.3432 4.3513 2 0.00050885 6450 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 99.568 76.497 28794000 8363700 13964000 6465800 0 0 0 0 0 0 0 0 0 0 0 0 40363 4778 36053 336563;336564;336565 266947;266948 266948 2 PQSIQESTGSIIEVLSK Unmodified 1814.9626 0.96255845 1667 P51659 HSD17B4 Peroxisomal multifunctional enzyme type 2;(3R)-hydroxyacyl-CoA dehydrogenase;Enoyl-CoA hydratase 2 yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 91.464 87.12 2;3 0.00016838 108401 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.41 58.129 34363000 0 34363000 0 0 0 0 0 0 0 0 0 0 0 0 0 40364 1667 36054 336566;336567;336568 266949;266950 266949 1 PQSPVIQAAAVSPK Unmodified 1391.7773 0.77726428 5276 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 58.895 53.053 2 0.00082543 68180 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.633 61.813 36005000 0 36005000 0 0 0 0 0 0 0 0 0 0 0 0 0 40365 5276 36055 336569 266951 266951 1 PQSQPPHSSPSPR Unmodified 1400.6797 0.6796755 3662;2171 Q09472;Q92793 EP300;CREBBP Histone acetyltransferase p300;CREB-binding protein no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 10.109 10.22 3 0.0035469 8360 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 49.31 40.797 66636000 0 0 0 6597500 3765500 6101700 6125800 4294800 4382200 5734100 0 9158100 6567500 6314100 7594600 40366 2171;3662 36056 336570;336571;336572;336573;336574;336575;336576;336577;336578;336579;336580 266952;266953;266954;266955 266954 4 PQSVCAPSEQLLHLIK Unmodified 1818.9662 0.96620404 2111 Q05048 CSTF1 Cleavage stimulation factor subunit 1 yes yes 0 0 0 By MS/MS 2 0 1 1 89.407 81.277 3 0.00025447 105591 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.481 61.752 14328000 14328000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40367 2111 36057 336581 266956 266956 1 PQTLPSAVK Unmodified 939.53893 0.53893149 2217 Q12972 PPP1R8 Nuclear inhibitor of protein phosphatase 1;Activator of RNA decay yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 3 6 1 1 1 1 1 1 1 1 1 33.258 31.926 2 0.0046985 41223 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.66 60.492 185280000 16744000 116110000 6238400 0 0 0 0 0 0 5813200 7655400 10590000 4359600 6005600 11760000 40368 2217 36058 336582;336583;336584;336585;336586;336587;336588;336589;336590 266957;266958;266959;266960;266961 266958 5 PQTQMQLIHR Unmodified 1250.6554 0.655375 4954 Q9UK59 DBR1 Lariat debranching enzyme yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 37.454 37.953 3 0.0017509 41935 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 65.278 54.906 38694000 0 0 0 0 0 0 0 0 0 0 11134000 0 0 7664200 19896000 40369 4954 36059 336591;336592;336593 266962;266963;266964 266963 2 PQTSGAYVLNK Unmodified 1176.6139 0.61388734 4822 Q9P2N5 RBM27 RNA-binding protein 27 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 34.588 34.054 2 4.8549E-17 43319 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 176.33 117.41 223150000 0 82258000 0 0 9451900 11208000 10742000 10278000 6608900 14037000 13920000 18703000 19359000 11720000 14862000 40370 4822 36060 336594;336595;336596;336597;336598;336599;336600;336601;336602;336603;336604;336605;336606;336607 266965;266966;266967;266968;266969;266970;266971;266972;266973;266974;266975;266976;266977;266978;266979 266968 14 PQVAAQSQPQSNVQGQSPVR Unmodified 2105.0614 0.061378063 2195 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 37.193 37.375 3 5.013E-06 41255 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 63.302 54.206 43285000 0 0 0 3962200 0 5443900 3832700 3624000 0 4445200 6122600 0 6178900 0 9676100 40371 2195 36061 336608;336609;336610;336611;336612;336613;336614;336615;336616 266980;266981;266982;266983;266984;266985;266986;266987;266988;266989;266990 266982 11 PQVFVSNK Unmodified 917.49707 0.49706667 5243 Q9Y5P6 GMPPB Mannose-1-phosphate guanyltransferase beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 31.054 26.571 2 0.002997 36299 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 173.73 130.6 160970000 50939000 107290000 2738000 0 0 0 0 0 0 0 0 0 0 0 0 40372 5243 36062 336617;336618;336619;336620 266991;266992;266993;266994;266995;266996 266995 4 PQVIADYESGR Unmodified 1233.599 0.59896556 438 O60869 EDF1 Endothelial differentiation-related factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.532 41.714 2 0.00025931 46469 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 91.584 72.605 195890000 0 0 0 8758900 8780900 8250100 11254000 11340000 0 10229000 30153000 32844000 8577800 20834000 44873000 40373 438 36063 336621;336622;336623;336624;336625;336626;336627;336628;336629;336630;336631;336632 266997;266998;266999;267000;267001;267002;267003;267004;267005;267006;267007;267008;267009;267010 266999 14 PQVIADYESGRAIPNNQVLGK Unmodified 2268.1862 0.18624423 438 O60869 EDF1 Endothelial differentiation-related factor 1 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 73.762 69.771 3 0.00021811 88002 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 54.117 40.102 103500000 0 71373000 32128000 0 0 0 0 0 0 0 0 0 0 0 0 40374 438 36064 336633;336634;336635 267011;267012 267011 2 PQVQLHVQSQTQPVSLANTQPR Unmodified 2455.2932 0.29316891 2595 Q15942 ZYX Zyxin yes yes 0 0 0 By MS/MS 10 0 1 1 64.07 64.634 3 4.4524E-08 73199 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.255 47.748 12098000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12098000 40375 2595 36065 336636 267013 267013 1 PQVVVAPVLMSK Oxidation (M) 1282.7319 0.73189399 4314 Q9H074 PAIP1 Polyadenylate-binding protein-interacting protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.42 3.66 3 1 8 1 2 1 1 1 1 1 1 1 1 1 69.148 67.433 2 1.0672E-05 76497 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 116.55 101.3 647140000 126090000 282880000 5211100 0 13591000 18971000 24764000 0 18186000 33623000 38213000 0 0 27756000 57851000 40376 4314 36066 336637;336638;336639;336640;336641;336642;336643;336644;336645;336646;336647;336648 267014;267015;267016;267017;267018;267019;267020;267021;267022;267023 267017 5778 6 PQVVVAPVLMSK Unmodified 1266.737 0.73697937 4314 Q9H074 PAIP1 Polyadenylate-binding protein-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77.74 76.876 2 0.00019288 97922 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 109.6 101.36 1364300000 342190000 720040000 0 7583200 10513000 13709000 14095000 15416000 10802000 24421000 35303000 32568000 12096000 31118000 94408000 40377 4314 36066 336649;336650;336651;336652;336653;336654;336655;336656;336657;336658;336659;336660;336661;336662 267024;267025;267026;267027;267028;267029 267026 5 PQYLEELPGQLK Unmodified 1413.7504 0.75038083 1120 P21266 GSTM3 Glutathione S-transferase Mu 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 6.56 3.86 3 1 5 1 2 1 1 1 1 1 1 77.609 75.336 2 1.4934E-09 93793 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.71 120.85 983590000 10848000 919370000 9664700 0 0 3855100 0 0 0 0 7222400 0 0 5136400 27495000 40378 1120 36067 336663;336664;336665;336666;336667;336668;336669;336670;336671 267030;267031;267032;267033;267034;267035;267036;267037 267030 8 PQYQTWEEFSR Unmodified 1469.6575 0.65754307 1576 P49458 SRP9 Signal recognition particle 9 kDa protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.489 67.571 2 2.3228E-05 76699 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 147.78 135.49 302470000 0 0 0 8494800 16108000 24261000 17966000 18083000 15331000 28384000 40386000 33250000 21239000 22553000 56418000 40379 1576 36068 336672;336673;336674;336675;336676;336677;336678;336679;336680;336681;336682;336683 267038;267039;267040;267041;267042;267043;267044;267045;267046;267047;267048;267049;267050;267051 267042 13 PQYQTWEEFSRAAEK Unmodified 1868.8693 0.86932676 1576 P49458 SRP9 Signal recognition particle 9 kDa protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 3 2 1 75.316 69.976 2;3 7.2433E-60 90693 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 205.96 182.87 676150000 559940000 78477000 37740000 0 0 0 0 0 0 0 0 0 0 0 0 40380 1576 36069 336684;336685;336686;336687;336688;336689 267052;267053;267054;267055;267056;267057 267056 6 PQYVDQIPK Unmodified 1086.571 0.5709599 1839 P61221 ABCE1 ATP-binding cassette sub-family E member 1 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.24 2 1 10 1 2 1 1 1 1 1 1 1 1 1 1 47.163 45.913 2 0.00054451 57952 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 148.52 79.608 313370000 7902000 208830000 0 5254000 0 11798000 6478700 0 7165100 8985500 11460000 11155000 10358000 7887700 16090000 40381 1839 36070 336690;336691;336692;336693;336694;336695;336696;336697;336698;336699;336700;336701;336702 267058;267059;267060;267061;267062 267058 4 PRAASAYAVGDVK Unmodified 1303.6884 0.68844927 990 P13861 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 36.922 31.609 2;3 0.012765 43673 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.479 45.224 274920000 251500000 14499000 8923000 0 0 0 0 0 0 0 0 0 0 0 0 40382 990 36071 336703;336704;336705;336706 267063;267064 267063 1 PRDLELPLSPSLLGGPGPER Unmodified 2099.1375 0.13750312 1088 P19419 ELK1 ETS domain-containing protein Elk-1 yes yes 0 0 1 By MS/MS 10 0 1 1 86.698 86.857 3 0.011946 100373 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 27.958 20.249 6256800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6256800 40383 1088 36072 336707 267065 267065 1 PRDLIEMMTEFTINK Unmodified 1836.9114 0.91139127 5333 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 46.627 46.838 3 0.00088044 51835 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 41.967 12.954 + 31401000 0 0 0 0 0 7692200 0 0 0 0 0 0 9254400 14455000 0 40384 5333 36073 336708;336709;336710 267066;267067;267068 267067 3 PREGEETLRIEDILEVIEK Unmodified 2267.2009 0.20089124 2629 Q16719 KYNU Kynureninase yes yes 0 0 2 By MS/MS By MS/MS By MS/MS 2.33 0.471 6 3 6 2 1 97.68 92.117 3;4 6.2067E-39 116524 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 129.32 88.46 1340000000 1223900000 106640000 9480900 0 0 0 0 0 0 0 0 0 0 0 0 40385 2629 36074 336711;336712;336713;336714;336715;336716;336717;336718;336719 267069;267070;267071;267072;267073;267074;267075;267076;267077;267078;267079;267080 267079 9 PREIMDAAEDYAK Unmodified 1507.6977 0.69769333 1009 P14868 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 4 1 2 1 56.989 51.053 2;3 0.00098363 66438 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.463 80.831 260610000 54444000 170850000 35322000 0 0 0 0 0 0 0 0 0 0 0 0 40386 1009 36075 336720;336721;336722;336723 267081;267082;267083;267084;267085 267082 4 PREIMDAAEDYAK Oxidation (M) 1523.6926 0.69260795 1009 P14868 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 0 1 1 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 38.895 34.818 3 0.0087989 43868 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 51.546 46.231 27137000 0 5164900 21972000 0 0 0 0 0 0 0 0 0 0 0 0 40387 1009 36075 336724;336725 267086;267087;267088 267087 1388 3 PREPFDLGEPEQSNGGFPCTTAPK Unmodified 2630.2071 0.2071156 4074 Q99961 SH3GL1 Endophilin-A2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 75.062 74.911 3 4.1352E-68 86850 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 92.275 85.397 209510000 0 0 11442000 6351400 7659000 12908000 9730800 14344000 10859000 20567000 22579000 20488000 16283000 15748000 40554000 40388 4074 36076 336726;336727;336728;336729;336730;336731;336732;336733;336734;336735;336736;336737;336738 267089;267090;267091;267092;267093;267094;267095;267096;267097;267098;267099;267100;267101;267102;267103;267104;267105 267102 17 PRGEASEDLCEMALDPELLLLRDDGEEEFAGAK Unmodified 3674.708 0.7080066 3308 Q8N163 CCAR2 Cell cycle and apoptosis regulator protein 2 yes yes 0 0 2 By MS/MS 2 0 1 1 97.822 89.691 4 0.00028746 115786 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 37.624 35.856 33224000 33224000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40389 3308 36077 336739 267106 267106 1 PRHQEGEIFDTEK Unmodified 1584.7532 0.75323437 2083 Q02878 RPL6 60S ribosomal protein L6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 27.928 27.622 3 2.019E-09 27662 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 114.31 94.915 278270000 19008000 0 0 10872000 5483900 25875000 8736400 12682000 12276000 18112000 15978000 51204000 39903000 16088000 42054000 40390 2083 36078 336740;336741;336742;336743;336744;336745;336746;336747;336748;336749;336750;336751;336752 267107;267108;267109;267110;267111;267112;267113;267114;267115;267116;267117;267118 267110 9 PRIIEVAPQVATQNVNPTPGATS Unmodified 2359.2496 0.24957276 1610 P49903 SEPHS1 Selenide, water dikinase 1 yes yes 0 0 1 By MS/MS 2 0 1 1 79.4 71.27 3 3.4006E-18 93673 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.206 87.367 29057000 29057000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40391 1610 36079 336753 267119;267120 267120 2 PRLDTEQLAQR Unmodified 1325.7052 0.70516197 3148 Q86UE8 TLK2 Serine/threonine-protein kinase tousled-like 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.371 36.551 3 0.0042344 40493 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 44.612 34.824 77827000 0 0 0 3862600 2996300 6462100 5526800 6124500 3646000 7715700 7198700 6791500 8428700 6901000 12173000 40392 3148 36080 336754;336755;336756;336757;336758;336759;336760;336761;336762;336763;336764;336765 267121;267122;267123;267124;267125;267126;267127;267128;267129 267121 9 PRLGQEATVGK Unmodified 1154.6408 0.6407708 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.09 3.38 7 1 25 4 2 2 2 2 2 3 2 2 2 2 2 2 2 2 21.044 20.1 2;3 5.0694E-07 28149 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 116.55 80.122 9732900000 2950400000 144800000 29928000 232620000 389320000 304870000 1299300000 1635300000 1373600000 273550000 433350000 541700000 18982000 26369000 78844000 40393 1714 36081 336766;336767;336768;336769;336770;336771;336772;336773;336774;336775;336776;336777;336778;336779;336780;336781;336782;336783;336784;336785;336786;336787;336788;336789;336790;336791;336792;336793;336794;336795;336796;336797;336798 267130;267131;267132;267133;267134;267135;267136;267137;267138;267139;267140;267141;267142;267143;267144;267145;267146;267147;267148;267149;267150;267151;267152;267153;267154;267155;267156;267157;267158;267159;267160;267161;267162;267163 267141 28 PRMDQYFNQMEK Unmodified 1585.7017 0.70173285 2102;329 Q04637;O43432 EIF4G1;EIF4G3 Eukaryotic translation initiation factor 4 gamma 1;Eukaryotic translation initiation factor 4 gamma 3 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.5 58.615 3 0.0020161 66453 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 86.288 79.158 196710000 0 0 0 3728400 4004200 13945000 8444800 12544000 18090000 13333000 18638000 22188000 13096000 16108000 52591000 40394 2102;329 36082 336799;336800;336801;336802;336803;336804;336805;336806;336807;336808;336809;336810 267164;267165;267166 267165 1 PRNEEENIYSVPHDSTQGK Unmodified 2199.0192 0.019238477 4615 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 40.743 35.601 4 0.0078652 44859 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 45.876 42.382 32369000 7062100 0 25307000 0 0 0 0 0 0 0 0 0 0 0 0 40395 4615 36083 336811;336812 267167 267167 1 PRNQGGYGGSSSSSSYGSGR Unmodified 1946.8467 0.84669384 891 P09651 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.657 12.811 3 2.8838E-78 11645 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 131.31 131.31 235660000 0 0 0 9553000 9910800 7319100 15146000 13501000 11303000 13443000 25418000 30098000 20270000 22014000 57679000 40396 891 36084 336813;336814;336815;336816;336817;336818;336819;336820;336821;336822;336823;336824 267168;267169;267170;267171;267172;267173;267174;267175;267176;267177;267178;267179;267180;267181;267182 267180 14 PRNTAELQPESGK Unmodified 1425.7212 0.72120596 275 O15355 PPM1G Protein phosphatase 1G yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 5 2 1 2 19.63 15.986 2;3 2.6561E-05 22827 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 105.03 78.989 238160000 200630000 16984000 20554000 0 0 0 0 0 0 0 0 0 0 0 0 40397 275 36085 336825;336826;336827;336828;336829 267183;267184;267185;267186;267187 267184 4 PRPPPALGPEETSASAGLPK Unmodified 1971.0425 0.042540102 2049 Q01105 SET Protein SET yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59.411 58.877 3 1.7641E-71 66544 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 130.11 127.59 601180000 30939000 0 0 15070000 18477000 33852000 18103000 23648000 31172000 27451000 71256000 53820000 53017000 55864000 168510000 40398 2049 36086 336830;336831;336832;336833;336834;336835;336836;336837;336838;336839;336840;336841;336842;336843 267188;267189;267190;267191;267192;267193;267194;267195;267196;267197;267198;267199;267200;267201;267202;267203;267204;267205;267206;267207;267208 267192 20 PRPPPLPSEPPPPLPPLPK Unmodified 2022.1666 0.1666184 412 O60563 CCNT1 Cyclin-T1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.178 82.24 3 1.0425E-06 95464 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 76.151 67.104 125040000 0 0 0 1150300 3880800 12522000 3741400 8108400 9767800 14999000 12209000 11924000 7152600 11802000 27783000 40399 412 36087 336844;336845;336846;336847;336848;336849;336850;336851;336852;336853;336854;336855 267209;267210;267211;267212;267213;267214;267215;267216;267217;267218;267219;267220;267221 267218 13 PRPPQSSTGSTASPPVSTPVTGHK Unmodified 2372.2084 0.20843623 3706 Q93052 LPP Lipoma-preferred partner yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 1 1 1 1 1 2 2 37.214 37.442 3;4 3.9588E-27 40863 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 92.565 77.796 173990000 0 0 0 7069400 5096400 9043400 7970900 7901700 6953500 11964000 18255000 29141000 7767900 21054000 41768000 40400 3706 36088 336856;336857;336858;336859;336860;336861;336862;336863;336864;336865;336866;336867;336868;336869 267222;267223;267224;267225;267226;267227;267228;267229;267230;267231;267232;267233;267234 267233 12 PRPVILDPADPTGNLGGGDPK Unmodified 2085.0855 0.085467549 738 P00973 OAS1 2'-5'-oligoadenylate synthase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 71.143 71.238 3 1.6848E-05 81718 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 54.271 38.328 46140000 0 0 0 0 3948500 7245100 3814600 5600200 4748000 5238400 6294700 9250100 0 0 0 40401 738 36089 336870;336871;336872;336873;336874;336875;336876;336877 267235;267236;267237;267238;267239;267240;267241;267242;267243;267244;267245 267239 11 PRQEDKDDLDVTELTNEDLLDQLVK Unmodified 2940.4564 0.45639024 1446;1447 P42166;P42167 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin no no 0 0 2 By MS/MS 2 0 1 1 95.403 87.272 4 0.0041084 112769 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 30.223 23.647 23290000 23290000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40402 1446;1447 36090 336878 267246 267246 1 PRQIDNPDYK Unmodified 1244.6149 0.61494998 1225 P27797 CALR Calreticulin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.97 3.45 7 1 23 3 3 2 2 2 1 2 2 2 2 2 2 2 2 2 18.287 17.567 2;3 7.5857E-07 25608 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 153.24 129.21 9984400000 4760800000 1591700000 2663200000 35593000 29930000 43153000 42153000 42050000 54711000 65992000 141220000 110220000 85957000 88161000 229530000 40403 1225 36091 336879;336880;336881;336882;336883;336884;336885;336886;336887;336888;336889;336890;336891;336892;336893;336894;336895;336896;336897;336898;336899;336900;336901;336902;336903;336904;336905;336906;336907;336908;336909 267247;267248;267249;267250;267251;267252;267253;267254;267255;267256;267257;267258;267259;267260;267261;267262;267263;267264;267265;267266;267267;267268;267269;267270;267271 267256 23 PRSESELIDELSEDFDRSECK Unmodified 2540.1337 0.13367589 1113 P20810 CAST Calpastatin yes yes 0 0 2 By MS/MS By MS/MS 2.5 0.5 3 3 4 2 89.36 84.109 3;4 1.9345E-09 106916 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.06 104.74 351390000 321080000 30307000 0 0 0 0 0 0 0 0 0 0 0 0 0 40404 1113 36092 336910;336911;336912;336913;336914;336915 267272;267273;267274;267275;267276;267277;267278 267277 6 PRVNPVTSLSENYTCSDSEESSEK Unmodified 2714.1977 0.19773271 2406 Q14432 PDE3A cGMP-inhibited 3',5'-cyclic phosphodiesterase A yes yes 0 0 1 By MS/MS 2 0 1 1 65.967 57.673 3 4.7097E-103 77424 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 156.41 155.84 16943000 16943000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40405 2406 36093 336916 267279;267280 267280 2 PRVTPVEVMPVFPDFK Unmodified 1856.9859 0.98587685 3366 Q8N7H5 PAF1 RNA polymerase II-associated factor 1 homolog yes yes 0 0 1 By MS/MS By matching 2 0 2 1 1 93.722 87.201 3 0.026645 112898 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 32.746 27.203 109740000 8869800 100870000 0 0 0 0 0 0 0 0 0 0 0 0 0 40406 3366 36094 336917;336918 267281 267281 1 PRVVDFDETWNK Unmodified 1504.731 0.73104237 2329 Q13617 CUL2 Cullin-2 yes yes 0 0 1 By MS/MS 2 0 2 2 72.984 64.788 2;3 6.6602E-09 85798 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 111.94 98.347 58461000 58461000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40407 2329 36095 336919;336920 267282;267283 267283 1 PSAFYQQTLPNSHLTEEALK Unmodified 2273.1328 0.13281167 3492 Q8TCU4 ALMS1 Alstrom syndrome protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 80.683 72.553 3 4.0779E-06 95209 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.49 53.837 9508400 9508400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40408 3492 36096 336921 267284 267284 0 PSAGQGHPSAVCAEK Unmodified 1494.6885 0.68852563 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 13.353 12.534 3 0.00015694 17509 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.595 42.909 320360000 36152000 219600000 23784000 0 4068200 3895800 4305200 0 2743800 5287300 3795900 5176100 4613800 3011000 3926100 40409 3443 36097 336922;336923;336924;336925;336926;336927;336928;336929;336930;336931;336932;336933;336934;336935 267285;267286;267287;267288;267289;267290;267291;267292;267293 267291 9 PSAIQQR Unmodified 798.4348 0.43480077 1816;1400;2396 P38919;P60842;Q14240 EIF4A3;EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed;Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By matching 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 7.6325 6.8882 2 1.8938E-24 5594 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 181.42 81.499 956730000 107590000 467310000 4721000 25922000 21774000 69357000 53707000 44145000 39615000 0 12922000 34381000 19352000 18404000 37541000 40410 1400;1816;2396 36098 336936;336937;336938;336939;336940;336941;336942;336943;336944;336945;336946;336947;336948;336949;336950 267294;267295;267296;267297;267298;267299;267300;267301;267302 267294 6 PSAIQQRAIK Unmodified 1110.6509 0.65094155 1400 P38919 EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes yes 0 0 1 By MS/MS 2 0 1 1 24.356 19.38 2 6.335E-10 27412 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 172.94 120.22 52685000 52685000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40411 1400 36099 336951 267303 267303 1 PSAIQQRAILPCIK Unmodified 1593.9025 0.90248157 1816 P60842 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 75.945 69.41 3 0.00039417 88114 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.462 0 221840000 195180000 26657000 0 0 0 0 0 0 0 0 0 0 0 0 0 40412 1816 36100 336952;336953 267304;267305 267304 2 PSALAQETSLGAPEPLSGEQLVGSPQDK Unmodified 2805.4032 0.40323245 2653 Q2NKX8 ERCC6L DNA excision repair protein ERCC-6-like yes yes 0 0 0 By MS/MS By matching By MS/MS 5.4 3.77 2 1 2 3 1 1 82.909 80.402 2;3 1.1063E-229 99171 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 154.11 150.83 137070000 0 129090000 0 0 0 4066100 0 3909300 0 0 0 0 0 0 0 40413 2653 36101 336954;336955;336956;336957;336958 267306;267307;267308;267309 267306 4 PSALLGNSLALPR Unmodified 1307.7561 0.75613491 3516 Q8TEH3 DENND1A DENN domain-containing protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.572 79.631 2 5.1458E-13 92082 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 136.02 113.49 154490000 0 0 0 6454300 11941000 10893000 10152000 9324700 9397500 13252000 18378000 20714000 14563000 12723000 16695000 40414 3516 36102 336959;336960;336961;336962;336963;336964;336965;336966;336967;336968;336969;336970 267310;267311;267312;267313;267314;267315;267316;267317;267318;267319;267320;267321;267322 267316 13 PSAPDMEDFGLVK Unmodified 1404.6595 0.65951691 2142 Q07864 POLE DNA polymerase epsilon catalytic subunit A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 19.295 19.54 3 0.014063 18696 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 27.862 17.252 17835000 0 0 0 0 0 0 3140000 2872200 0 0 0 0 0 0 11822000 40415 2142 36103 336971;336972;336973 267323;267324;267325 267324 3 PSASFGSPVQSEALAPDSMSHPR Oxidation (M) 2370.091 0.091023212 2867 Q6BDS2 UHRF1BP1 UHRF1-binding protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 59.907 60.084 3 8.5859E-73 68489 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 128.67 116.71 96700000 0 0 0 0 5672800 13074000 7246700 6494000 9954100 8663200 8687500 13473000 8730800 7724700 6979300 40416 2867 36104 336974;336975;336976;336977;336978;336979;336980;336981;336982;336983;336984 267326;267327;267328;267329;267330;267331;267332;267333;267334;267335;267336;267337;267338;267339 267338 4515 14 PSASFGSPVQSEALAPDSMSHPR Unmodified 2354.0961 0.09610859 2867 Q6BDS2 UHRF1BP1 UHRF1-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 2 1 1 1 1 1 67.803 68.055 3 3.6485E-34 77287 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 84.689 81.68 74770000 0 0 0 0 0 0 0 8866600 5873500 8616500 9206100 12066000 7313200 7774000 15054000 40417 2867 36104 336985;336986;336987;336988;336989;336990;336991;336992;336993 267340;267341;267342;267343;267344;267345;267346;267347;267348;267349;267350 267346 10 PSATGYLGSVAAK Unmodified 1220.6401 0.6401021 690 O95785 WIZ Protein Wiz yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 52.06 52.183 2 3.6647E-32 57865 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 154.66 129.09 101380000 0 0 0 0 16257000 0 0 21449000 0 27278000 0 0 0 0 36393000 40418 690 36105 336994;336995;336996;336997 267351;267352;267353;267354 267352 3 PSCTIIPLMK Oxidation (M) 1174.609 0.60900166 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 2 1 1 1 1 1 1 1 1 61.715 61.855 2 0.0009923 70901 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 90.64 78.872 84606000 0 0 0 3312600 0 21900000 4687100 0 4974600 6471700 7866300 7592500 5486300 8366900 13949000 40419 1565 36106 336998;336999;337000;337001;337002;337003;337004;337005;337006;337007;337008;337009 267355;267356;267357;267358;267359;267360;267361;267362;267363 267356 2500 9 PSCTIIPLMK Unmodified 1158.6141 0.61408704 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 6 4 2 2 1 1 1 1 79.701 76.563 2 5.7772E-06 96334 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128 82.255 282190000 28809000 184600000 0 0 0 18326000 0 0 0 0 0 0 0 0 50460000 40420 1565 36106 337010;337011;337012;337013 267364;267365;267366 267364 3 PSDAASEAARPATSTLNR Unmodified 1813.8919 0.89185312 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 32.607 32.792 2;3 2.1269E-84 35704 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 157.8 139.67 9469300000 0 0 0 476200000 480570000 779320000 566810000 679170000 654940000 871500000 976970000 1337500000 709720000 788550000 1148000000 40421 2102 36107 337014;337015;337016;337017;337018;337019;337020;337021;337022;337023;337024;337025;337026;337027;337028;337029;337030;337031;337032;337033;337034;337035;337036;337037 267367;267368;267369;267370;267371;267372;267373;267374;267375;267376;267377;267378;267379;267380;267381;267382;267383;267384 267380 17 PSDAEASEGGEQEERER Unmodified 1874.7878 0.78784156 3908 Q96KM6 ZNF512B Zinc finger protein 512B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 10.9 11.035 3 6.5831E-10 10042 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 75.574 69.137 37425000 0 0 0 1902400 1745200 5358600 2659000 1792300 2765200 3180500 2793400 5395500 3420700 3375000 3037600 40422 3908 36108 337038;337039;337040;337041;337042;337043;337044;337045;337046;337047;337048;337049 267385;267386;267387;267388;267389;267390;267391;267392;267393;267394;267395 267387 11 PSDALILGK Unmodified 912.52803 0.52803245 2237 Q13126 MTAP S-methyl-5'-thioadenosine phosphorylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.78 3.74 1 3 2 3 3 2 1 1 1 1 61.27 58.548 2 0.00308 56209 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 134.15 90.936 391020000 138290000 107860000 53562000 0 0 0 0 0 0 0 25676000 0 0 0 65629000 40423 2237 36109 337050;337051;337052;337053;337054;337055;337056;337057;337058 267396;267397;267398;267399;267400;267401;267402;267403;267404;267405;267406;267407 267398 11 PSDLHLQTGYK Unmodified 1257.6354 0.63535107 1179 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 38.541 37.4 3 1.3203E-09 49266 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 111.94 94.914 360590000 72601000 110990000 74788000 4460100 4814800 8784400 5366300 7814800 5488400 8935600 7912100 11452000 12535000 12084000 12557000 40424 1179 36110 337059;337060;337061;337062;337063;337064;337065;337066;337067;337068;337069;337070;337071;337072;337073;337074 267408;267409;267410;267411;267412;267413;267414;267415;267416;267417 267410 10 PSDLLEENK Unmodified 1043.5135 0.5135046 3791 Q96D71 REPS1 RalBP1-associated Eps domain-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 34.594 29.837 2 1.2812E-23 39073 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 205.36 151.8 35167000 0 35167000 0 0 0 0 0 0 0 0 0 0 0 0 0 40425 3791 36111 337075 267418;267419 267418 2 PSDLRPGDVSSK Unmodified 1256.6361 0.63607935 2117 Q05682 CALD1 Caldesmon yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.08 3.33 2 1 9 2 1 1 1 1 1 1 1 1 1 1 21.204 20.408 3 0.0015159 21488 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 60.157 43.131 301030000 0 93564000 39759000 0 11008000 18371000 0 12905000 0 0 22991000 28790000 27860000 23213000 22565000 40426 2117 36112 337076;337077;337078;337079;337080;337081;337082;337083;337084;337085;337086;337087 267420;267421;267422;267423;267424;267425;267426;267427;267428;267429;267430;267431;267432 267420 11 PSDLSQVWPEANQHFSK Unmodified 1968.933 0.93298965 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 76.717 72.906 3 0.030428 88627 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 26.474 20.652 17665000 0 14621000 3044000 0 0 0 0 0 0 0 0 0 0 0 0 40427 19 36113 337088;337089 267433 267433 1 PSDNLIVCGR Unmodified 1129.555 0.55499226 2325 Q13610 PWP1 Periodic tryptophan protein 1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 42.629 42.614 2 0.033145 47644 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 42.19 26.528 6599400 0 0 0 2230100 0 0 0 0 1728300 0 0 0 2641000 0 0 40428 2325 36114 337090;337091;337092 267434 267434 1 PSDQETGEQVSSPSSHPALHTTTEDSAGVQTEF Unmodified 3455.5237 0.52369453 4003 Q96TA1 FAM129B Niban-like protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 67.411 62.108 3 3.2989E-16 79622 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.861 54.875 32779000 0 32779000 0 0 0 0 0 0 0 0 0 0 0 0 0 40429 4003 36115 337093;337094 267435 267435 1 PSDSFSAGEPR Unmodified 1148.5098 0.5098162 4105 Q9BRA0 NAA38 N-alpha-acetyltransferase 38, NatC auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 27.62 27.807 2 3.0919E-06 29272 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 143.03 117.9 110150000 0 0 0 0 3729900 8047300 0 0 0 22366000 33466000 42544000 0 0 0 40430 4105 36116 337095;337096;337097;337098;337099 267436;267437;267438;267439;267440;267441 267440 6 PSDSVHITNDDER Unmodified 1483.6539 0.65391426 28 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 21.475 21.733 3 0.0023627 22796 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 52.891 41.633 17230000 0 0 0 0 0 9184300 0 0 3145400 0 0 4900100 0 0 0 40431 28 36117 337100;337101;337102 267442 267442 1 PSDVVRCLSTEQR Unmodified 1545.7569 0.75693954 4220 Q9BX66 SORBS1 Sorbin and SH3 domain-containing protein 1 yes yes 0 0 1 By MS/MS 10 0 1 1 15.354 15.163 3 0.028367 14651 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 21.775 2.9523 11580000 0 0 0 0 11580000 0 0 0 0 0 0 0 0 0 0 40432 4220 36118 337103 267443 267443 1 PSEDSPENATSR Unmodified 1288.5531 0.55313758 488 O75376 NCOR1 Nuclear receptor corepressor 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.368 11.485 2 0.0027969 10585 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 73.067 68.454 18674000 0 0 0 1473200 647470 1897600 818870 1368800 1580400 1351600 0 1974800 2915500 2229100 2416700 40433 488 36119 337104;337105;337106;337107;337108;337109;337110;337111;337112;337113;337114 267444;267445;267446;267447;267448;267449;267450;267451 267445 8 PSEDVLVK Unmodified 885.48075 0.48074791 2068 Q02040 AKAP17A A-kinase anchor protein 17A yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 31.532 31.652 2 0.029218 33133 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 56.27 33.648 27209000 0 0 0 2046300 2644200 4792800 0 0 0 4127300 4744900 0 0 3796500 5057000 40434 2068 36120 337115;337116;337117;337118;337119;337120;337121 267452;267453;267454 267454 3 PSEELPAEATSSVEPEK Unmodified 1798.8473 0.84725392 621 O95104 SCAF4 Splicing factor, arginine/serine-rich 15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 2 1 1 1 1 2 2 1 53.202 53.303 2 8.9705E-37 60519 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 122.46 96.417 113050000 0 0 0 8841100 7897200 19589000 11356000 11691000 0 0 0 18338000 11425000 8262200 15655000 40435 621 36121 337122;337123;337124;337125;337126;337127;337128;337129;337130;337131;337132;337133;337134 267455;267456;267457;267458;267459;267460;267461;267462;267463;267464;267465 267462 11 PSEGTTLRVEDLVK Unmodified 1542.8253 0.82533668 1614 P49959 MRE11A Double-strand break repair protein MRE11A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 1 2 2 1 1 1 1 1 1 1 1 1 1 1 1 67.636 66.41 2;3 0.0033095 83062 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 75.819 35.23 728320000 514320 250620000 174690000 6604100 9621800 34603000 16072000 15337000 23119000 27978000 31397000 32661000 24871000 29432000 50796000 40436 1614 36122 337135;337136;337137;337138;337139;337140;337141;337142;337143;337144;337145;337146;337147;337148;337149;337150;337151 267466;267467;267468;267469;267470;267471;267472;267473;267474;267475;267476 267472 7 PSELSENTAK Unmodified 1074.5193 0.51931826 1665 P51648 ALDH3A2 Fatty aldehyde dehydrogenase yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 13.89 14.025 2 0.0021721 13595 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 85.862 3.1113 29863000 0 0 0 8109000 0 3867500 2162400 0 3209300 0 3879500 0 4073100 4562200 0 40437 1665 36123 337152;337153;337154;337155;337156;337157;337158;337159 267477;267478;267479;267480;267481;267482;267483 267483 7 PSEPRPSPEPQISIPVK Unmodified 1856.9996 0.99961265 144 O00330 PDHX Pyruvate dehydrogenase protein X component, mitochondrial yes yes 0 0 1 By MS/MS 2 0 1 1 70.995 67.713 3 0.014072 83113 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 37.77 32.227 4186800 0 0 4186800 0 0 0 0 0 0 0 0 0 0 0 0 40438 144 36124 337160 267484;267485 267484 2 PSEQLTPTRAEK Unmodified 1355.7045 0.70449327 2434 Q14687 GSE1 Genetic suppressor element 1 yes yes 0 0 1 By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 19.248 19.469 3 0.033975 20151 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 32.567 16.034 22993000 0 0 0 2009600 0 3337500 1838600 1715400 1800800 2527300 2308000 2882800 0 0 4572800 40439 2434 36125 337161;337162;337163;337164;337165;337166;337167;337168;337169 267486 267486 1 PSETPQAEVGPTGCPHR Unmodified 1818.8319 0.8318954 910 P0DN79;P35520 CBS Cystathionine beta-synthase yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 31.123 30.439 3 2.7601E-26 38756 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.62 116.3 418150000 0 55580000 6684000 13484000 12151000 45502000 25398000 13920000 13214000 36271000 31484000 31335000 20746000 45297000 67083000 40440 910 36126 337170;337171;337172;337173;337174;337175;337176;337177;337178;337179;337180;337181;337182;337183;337184 267487;267488;267489;267490;267491;267492;267493;267494;267495;267496;267497;267498;267499;267500;267501;267502;267503;267504;267505;267506 267491 20 PSETPQAEVGPTGCPHRSGPHSAK Unmodified 2483.1612 0.16116846 910 P0DN79;P35520 CBS Cystathionine beta-synthase yes no 0 0 1 By MS/MS By MS/MS 2.33 0.471 4 2 4 2 27.174 22.741 4;5 6.5559E-83 32549 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 123.12 121.13 1440300000 1422800000 0 17544000 0 0 0 0 0 0 0 0 0 0 0 0 40441 910 36127 337185;337186;337187;337188;337189;337190 267507;267508;267509;267510;267511 267510 5 PSFAAESVGQSAEPPKPSVEPALQQHR Unmodified 2843.4202 0.42021992 2989 Q6W2J9 BCOR BCL-6 corepressor yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 64.038 64.428 4 0.00081474 73704 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 27.389 20.113 47239000 0 0 0 0 0 0 0 0 0 0 10636000 12487000 0 7324600 16792000 40442 2989 36128 337191;337192;337193;337194 267512;267513;267514 267513 3 PSFDPNLSELR Unmodified 1273.6303 0.63026569 1474 P43246 MSH2 DNA mismatch repair protein Msh2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.298 74.359 2 0.010994 86157 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 48.981 21.239 173450000 0 0 0 7293300 7426100 12144000 11827000 13843000 6230600 16626000 20666000 19593000 14073000 13644000 30085000 40443 1474 36129 337195;337196;337197;337198;337199;337200;337201;337202;337203;337204;337205;337206 267515;267516;267517;267518 267517 3 PSFDPNLSELREIMNDLEK Unmodified 2246.0889 0.088897947 1474 P43246 MSH2 DNA mismatch repair protein Msh2 yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 2 2 2 2 98.42 93.463 3 1.5281E-87 118200 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 177.64 162.16 80442000 70405000 10038000 0 0 0 0 0 0 0 0 0 0 0 0 0 40444 1474 36130 337207;337208;337209;337210 267519;267520 267520 2 PSFFDFEGK Unmodified 1072.4866 0.48656157 4103 Q9BR61 ACBD6 Acyl-CoA-binding domain-containing protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 79.691 79.039 2 0.0058197 95794 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 106.93 100.29 204140000 0 76924000 33104000 3317200 4543400 5450400 4488500 6231900 4809300 8669500 11394000 10559000 6753900 7794000 20097000 40445 4103 36131 337211;337212;337213;337214;337215;337216;337217;337218;337219;337220;337221;337222;337223;337224;337225 267521;267522;267523;267524;267525;267526;267527;267528;267529;267530;267531 267528 10 PSFHAPEPK Unmodified 1008.5029 0.50288033 695 O95819 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 34.301 29.492 2 0.024396 41043 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.379 43.171 15497000 10971000 0 4526500 0 0 0 0 0 0 0 0 0 0 0 0 40446 695 36132 337226;337227 267532 267532 1 PSFISER Unmodified 834.42357 0.42356738 2189 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 34.763 34.777 2 0.023364 38439 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 89.123 54.231 65784000 0 0 0 5319300 6443200 14060000 5829500 0 6046900 9941600 0 0 9953700 8190000 0 40447 2189 36133 337228;337229;337230;337231;337232;337233;337234;337235 267533 267533 1 PSFLEYFEQK Unmodified 1286.6183 0.61830402 2227 Q13043 STK4 Serine/threonine-protein kinase 4;Serine/threonine-protein kinase 4 37kDa subunit;Serine/threonine-protein kinase 4 18kDa subunit yes yes 0 0 0 By MS/MS 2 0 1 1 92.904 84.773 2 0.012871 109878 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.649 66.32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40448 2227 36134 337236 267534 267534 1 PSFVSYVRPEEIHTNEK Unmodified 2031.0062 0.0061545955 4292 Q9C0I1 MTMR12 Myotubularin-related protein 12 yes yes 0 0 1 By MS/MS 2 0 1 1 73.519 65.323 4 0.028857 86617 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.794 33.872 11368000 11368000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40449 4292 36135 337237 267535 267535 0 PSGAISGVQK Unmodified 942.51345 0.51344502 4897 Q9UHD2 TBK1 Serine/threonine-protein kinase TBK1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 17.19 16.622 2 0.0029455 16066 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 78.516 27.48 89401000 3695000 46660000 0 2422300 2286900 0 0 3525000 0 4813800 4022000 5311100 5369700 4712200 6583000 40450 4897 36136 337238;337239;337240;337241;337242;337243;337244;337245;337246;337247;337248 267536;267537;267538;267539;267540;267541;267542;267543;267544 267539 8 PSGAPIIGPK Unmodified 935.54402 0.54401687 2136 Q07157 TJP1 Tight junction protein ZO-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 38.958 39.189 2 0.030985 42292 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.864 25.499 23804000 0 0 0 2599400 0 5338400 0 0 3091500 3301200 0 2641300 0 2288400 4544100 40451 2136 36137 337249;337250;337251;337252;337253;337254;337255 267545;267546 267546 2 PSGAPIIGPKPTSQNQFSEHDK Unmodified 2334.1604 0.16042341 2136 Q07157 TJP1 Tight junction protein ZO-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.12 3 13 2 1 1 1 1 1 1 1 1 1 1 1 1 2 47.894 46.801 3;4 3.5131E-20 65410 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.324 76.061 330090000 90826000 0 2857100 13214000 16200000 26551000 14348000 10630000 19008000 22062000 21111000 23368000 22494000 16154000 31272000 40452 2136 36138 337256;337257;337258;337259;337260;337261;337262;337263;337264;337265;337266;337267;337268;337269;337270;337271 267547;267548;267549;267550;267551;267552;267553;267554 267549 6 PSGELFAIK Unmodified 960.52803 0.52803245 2603 Q16512 PKN1 Serine/threonine-protein kinase N1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 77.519 70.983 2 0.0073023 88840 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.262 20.938 17224000 4568800 12655000 0 0 0 0 0 0 0 0 0 0 0 0 0 40453 2603 36139 337272;337273 267555;267556;267557 267556 3 PSGHPPPGDFIALGSK Unmodified 1575.8045 0.80454166 3315 Q8N201 INTS1 Integrator complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 63.045 62.198 3 0.00092231 85506 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.98 42.63 50162000 11988000 0 0 2508400 3054500 6090200 3930000 4259100 4090500 5234300 0 0 3546800 5460500 0 40454 3315 36140 337274;337275;337276;337277;337278;337279;337280;337281;337282;337283 267558;267559;267560;267561;267562;267563 267562 6 PSGLQTDVQK Unmodified 1071.556 0.55603812 3996 Q96SY0 VWA9 von Willebrand factor A domain-containing protein 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 23.463 22.511 2 1.3939E-12 28576 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 180.27 144.78 197270000 5806900 129300000 0 0 3485000 0 0 0 6184500 0 11758000 15150000 0 11465000 14122000 40455 3996 36141 337284;337285;337286;337287;337288;337289;337290;337291;337292;337293;337294 267564;267565;267566;267567;267568;267569;267570;267571;267572;267573;267574;267575 267567 12 PSGNDSCELR Unmodified 1133.4771 0.47713587 1331 P33981 TTK Dual specificity protein kinase TTK yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.348 12.497 2 0.0017713 11150 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 95.502 90.155 68612000 0 0 0 2008100 4015700 5353300 5202800 4814600 6549400 6115300 5244900 10062000 5226100 6156800 7863200 40456 1331 36142 337295;337296;337297;337298;337299;337300;337301;337302;337303;337304;337305;337306 267576;267577;267578;267579;267580;267581;267582;267583;267584;267585 267579 7 PSGNDSCELRNLK Unmodified 1488.6991 0.69909031 1331 P33981 TTK Dual specificity protein kinase TTK yes yes 0 0 1 By matching By MS/MS 2 0 2 1 1 33.574 29.617 3 0.021531 37874 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 42.209 42.209 17474000 0 11635000 5839000 0 0 0 0 0 0 0 0 0 0 0 0 40457 1331 36143 337307;337308 267586 267586 1 PSGNILTVPETSR Unmodified 1369.7201 0.72014333 294 O15550 KDM6A Lysine-specific demethylase 6A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.662 58.776 2 0.00044317 66776 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 79.82 69.449 49854000 0 0 0 2102000 3474900 3133600 4229300 3880100 2953200 4785400 3716500 4809900 6293500 3737700 6738300 40458 294 36144 337309;337310;337311;337312;337313;337314;337315;337316;337317;337318;337319;337320 267587;267588;267589;267590;267591;267592;267593;267594;267595;267596;267597;267598;267599 267593 13 PSGPIPDMLATAEPSSSETDK Unmodified 2128.9834 0.98342982 3881 Q96IQ9 ZNF414 Zinc finger protein 414 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.08 1 1 22 2 2 2 2 2 1 2 2 2 1 2 2 2 79.187 78.896 2;3 9.9792E-107 96931 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 180.11 170.57 156860000 0 33726000 0 5883000 7732200 10252000 6433400 5400700 8966400 13854000 11317000 6227400 8967600 14939000 23164000 40459 3881 36145 337321;337322;337323;337324;337325;337326;337327;337328;337329;337330;337331;337332;337333;337334;337335;337336;337337;337338;337339;337340;337341;337342;337343;337344 267600;267601;267602;267603;267604;267605;267606;267607;267608;267609;267610;267611;267612;267613;267614 267603 15 PSGPTPASGQLSSGDK Unmodified 1484.7107 0.71070086 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.097 27.249 2 3.2251E-28 28797 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 144.27 108.72 207380000 0 0 0 8264600 12320000 27390000 11234000 13832000 18502000 22265000 19623000 0 22046000 18615000 33290000 40460 1364 36146 337345;337346;337347;337348;337349;337350;337351;337352;337353;337354;337355;337356 267615;267616;267617;267618;267619;267620;267621;267622;267623;267624;267625;267626 267624 12 PSGQIMAVK Unmodified 929.50044 0.50043749 1491 P45985 MAP2K4 Dual specificity mitogen-activated protein kinase kinase 4 yes yes 0 0 0 By MS/MS 10 0 1 1 31.058 31.527 2 0.034602 34273 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 46.447 23.404 19163000 0 0 0 0 0 0 0 0 0 0 19163000 0 0 0 0 40461 1491 36147 337357 267627 267627 1 PSGQISDPSR Unmodified 1042.5043 0.5043369 2393 Q14207 NPAT Protein NPAT yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 2 2 1 2 1 2 1 1 2 18.097 18.194 2 0.0014192 9239 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 91.783 26.536 83312000 0 0 0 1888700 10004000 5864300 6024000 4610000 7471600 7950600 7098300 32400000 0 0 0 40462 2393 36148 337358;337359;337360;337361;337362;337363;337364;337365;337366;337367;337368;337369;337370;337371 267628;267629;267630;267631;267632;267633;267634;267635;267636;267637 267632 6 PSGSLIASTQDK Unmodified 1202.6143 0.61428128 624 O95163 IKBKAP Elongator complex protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 30.997 30.719 2 0.00034548 38817 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.843 71.107 123850000 0 77683000 0 0 1936800 8766700 0 0 4278100 0 4607700 8738900 5189100 3512800 9133000 40463 624 36149 337372;337373;337374;337375;337376;337377;337378;337379;337380 267638;267639;267640;267641;267642;267643 267640 5 PSGSLIASTQDKPNQQDIVFFEK Unmodified 2548.2809 0.28093247 624 O95163 IKBKAP Elongator complex protein 1 yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 79.806 79.709 3 3.9925E-10 91437 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.534 52.996 85497000 0 0 5859300 0 0 6799900 1952400 7180500 6544900 11874000 7944900 10736000 5051500 5415300 16139000 40464 624 36150 337381;337382;337383;337384;337385;337386;337387;337388;337389;337390;337391 267644;267645;267646 267644 3 PSGVQMDQPCCR Oxidation (M) 1449.5799 0.57990315 4075 Q99962 SH3GL2 Endophilin-A1 yes yes 0 1 0 By MS/MS 2 0 1 1 17.407 13.987 2 0.0055203 18339 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.908 65.943 8651200 0 8651200 0 0 0 0 0 0 0 0 0 0 0 0 0 40465 4075 36151 337392 267647 267647 5581 1 PSGVQMDQPCCR Unmodified 1433.585 0.58498853 4075 Q99962 SH3GL2 Endophilin-A1 yes yes 0 0 0 By MS/MS 2 0 1 1 31.917 27.465 2 1.7996E-05 35759 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.16 98.291 20505000 0 20505000 0 0 0 0 0 0 0 0 0 0 0 0 0 40466 4075 36151 337393 267648 267648 1 PSHCTIYVAK Unmodified 1174.5805 0.58047873 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 2 2 2 28.698 24.367 2;3 1.6796E-05 30602 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 126.07 101.23 3663800000 2771400000 301890000 590510000 0 0 0 0 0 0 0 0 0 0 0 0 40467 4819 36152 337394;337395;337396;337397;337398;337399 267649;267650;267651;267652;267653;267654;267655;267656 267653 5 PSHEVQIIK Unmodified 1049.5869 0.58694431 393 O60306 AQR Intron-binding protein aquarius yes yes 0 0 0 By MS/MS 10 0 1 1 40.7 40.983 2 0.025695 44559 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 50.127 2.4692 8764500 0 0 0 0 0 0 0 0 0 0 0 0 0 8764500 0 40468 393 36153 337400 267657 267657 1 PSHLVDAHTAEVNCLSFNPYSEFILATGSADK Unmodified 3489.6511 0.65108407 2615 Q16576 RBBP7 Histone-binding protein RBBP7 yes yes 0 0 0 By MS/MS 3 0 1 1 94.452 91.212 4 1.0728E-07 109225 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 46.785 42.343 12684000 0 12684000 0 0 0 0 0 0 0 0 0 0 0 0 0 40469 2615 36154 337401 267658 267658 1 PSHSVDAHTAEVNCLSFNPYSEFILATGSADK Unmodified 3463.599 0.5990485 2169 Q09028 RBBP4 Histone-binding protein RBBP4 yes yes 0 0 0 By MS/MS By MS/MS 2.67 0.471 1 2 2 1 94.055 89.097 4 5.3013E-12 113182 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.703 43.827 22469000 18698000 3771700 0 0 0 0 0 0 0 0 0 0 0 0 0 40470 2169 36155 337402;337403;337404 267659;267660 267660 2 PSIESYSEDDESK Unmodified 1484.6155 0.61546307 1181 P25054 APC Adenomatous polyposis coli protein yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 33.97 33.994 2 0.020645 37300 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 53.567 46.878 4747300 0 0 0 0 0 2051200 2696100 0 0 0 0 0 0 0 0 40471 1181 36156 337405;337406;337407 267661;267662 267662 1 PSIETLSTDLHTIK Unmodified 1553.8301 0.83008771 298 O43150 ASAP2 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 79.092 75.421 3 0.0044431 91540 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 38.995 31.13 20875000 0 15413000 5462400 0 0 0 0 0 0 0 0 0 0 0 0 40472 298 36157 337408;337409 267663 267663 1 PSILEAQK Unmodified 884.49673 0.49673232 624 O95163 IKBKAP Elongator complex protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 31.964 31.482 2 0.0049552 34696 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 108.7 66.805 425450000 0 348330000 10262000 1590700 3738800 9610300 4809600 3262500 4993800 5116900 7110200 5372600 0 8524600 12727000 40473 624 36158 337410;337411;337412;337413;337414;337415;337416;337417;337418;337419;337420;337421;337422 267664;267665;267666;267667;267668;267669;267670 267664 6 PSISAVTVELSK Unmodified 1229.6867 0.68671794 4785 Q9P000 COMMD9 COMM domain-containing protein 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.69 1 1 3 1 1 1 1 1 72.789 71.566 2 0.0029095 81859 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 61.833 27.755 17762000 0 3652900 4291900 0 0 5771400 1544800 0 2500700 0 0 0 0 0 0 40474 4785 36159 337423;337424;337425;337426;337427 267671;267672;267673;267674 267672 3 PSLAARPVIPQK Unmodified 1275.7663 0.76630566 2833 Q5VZK9 LRRC16A Leucine-rich repeat-containing protein 16A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 45.528 45.831 3 0.029607 50182 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 34 23.39 262410000 0 0 0 0 0 44256000 23609000 19685000 24888000 35864000 0 39200000 27928000 0 46978000 40475 2833 36160 337428;337429;337430;337431;337432;337433;337434;337435 267675 267675 1 PSLASPYLPEGTSK Unmodified 1445.7402 0.74021007 4801 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.003 65.09 2 1.5618E-20 74138 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 143.79 126.42 96609000 0 0 0 5803400 5677000 9360600 5820500 7894400 6809700 8569600 7580600 8010700 8193900 8383300 14505000 40476 4801 36161 337436;337437;337438;337439;337440;337441;337442;337443;337444;337445;337446;337447 267676;267677;267678;267679;267680;267681;267682;267683;267684;267685;267686;267687 267680 12 PSLAVAVDSAPEVAVK Unmodified 1551.8508 0.85082315 408 O60508 CDC40 Pre-mRNA-processing factor 17 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 79.438 75.397 2 1.2731E-50 93748 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 199.4 177.41 110580000 0 110580000 0 0 0 0 0 0 0 0 0 0 0 0 0 40477 408 36162 337448;337449 267688;267689 267688 2 PSLAVNLADPYR Unmodified 1314.6932 0.6932003 1052 P17275 JUNB Transcription factor jun-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 75.284 75.396 2 0.00059248 87135 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 77.288 49.984 108900000 0 0 0 0 6573200 7649300 10849000 8003700 9823100 9820500 12043000 11682000 7136200 8746300 16578000 40478 1052 36163 337450;337451;337452;337453;337454;337455;337456;337457;337458;337459;337460 267690;267691;267692;267693;267694;267695;267696;267697;267698;267699;267700;267701;267702 267702 13 PSLEPQKSLGDEGLNR Unmodified 1738.885 0.88497683 2067 Q01970 PLCB3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 56.625 56.955 3 0.04171 64682 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 25.59 20.95 67114000 0 0 0 0 0 9819300 0 0 0 11168000 8153600 14671000 0 6383200 16918000 40479 2067 36164 337461;337462;337463;337464;337465;337466 267703 267703 1 PSLLTMMK 2 Oxidation (M) 951.47692 0.47692486 1295 P31151;Q86SG5 S100A7;S100A7A Protein S100-A7;Protein S100-A7A yes no 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 5 2 1 1 1 1 1 2 1 2 2 1 34.104 34.207 2 0.0014267 36293 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 110.81 78.873 1721400000 0 0 0 1246000000 24231000 33215000 30992000 20506000 21799000 37472000 101680000 66367000 70422000 31221000 37467000 40480 1295 36165 337467;337468;337469;337470;337471;337472;337473;337474;337475;337476;337477;337478;337479;337480;337481;337482;337483;337484;337485;337486 267704;267705;267706;267707;267708;267709;267710;267711;267712;267713;267714;267715;267716;267717;267718;267719;267720;267721;267722;267723;267724;267725;267726;267727;267728 267707 1909;1910 21 PSLLTMMK Oxidation (M) 935.48201 0.48201024 1295 P31151;Q86SG5 S100A7;S100A7A Protein S100-A7;Protein S100-A7A yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 27 6 2 2 2 1 2 2 2 2 3 1 2 53.273 53.317 2 0.0029871 58936 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 110.31 64.428 2401700000 0 0 0 1703700000 64032000 100240000 53200000 17394000 47116000 76117000 148720000 128340000 39640000 23188000 0 40481 1295 36165 337487;337488;337489;337490;337491;337492;337493;337494;337495;337496;337497;337498;337499;337500;337501;337502;337503;337504;337505;337506;337507;337508;337509;337510;337511;337512;337513 267729;267730;267731;267732;267733;267734;267735;267736;267737;267738;267739;267740;267741;267742;267743;267744;267745;267746;267747;267748;267749;267750;267751;267752;267753;267754;267755;267756;267757 267748 1909;1910 28 PSLLTMMK Unmodified 919.4871 0.48709561 1295 P31151;Q86SG5 S100A7;S100A7A Protein S100-A7;Protein S100-A7A yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.692 73.759 2 0.0047077 85565 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 113.41 71.909 1982100000 0 0 0 1232300000 51123000 78181000 42762000 45835000 36785000 63508000 119740000 100400000 51530000 48515000 111430000 40482 1295 36165 337514;337515;337516;337517;337518;337519;337520;337521;337522;337523;337524;337525 267758;267759;267760;267761;267762;267763;267764;267765;267766;267767;267768;267769;267770;267771 267768 14 PSLLVPVGPRPPR Unmodified 1383.8351 0.83505393 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.604 68.684 3 0.0096629 79835 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 53.557 50.239 80862000 0 0 0 2899400 3807100 12578000 5137400 4952300 4901500 7038400 6497500 10944000 6151500 5450900 10503000 40483 4285 36166 337526;337527;337528;337529;337530;337531;337532;337533;337534;337535;337536;337537 267772;267773;267774;267775;267776;267777;267778 267778 4 PSLMQVGGYNNQAK Unmodified 1505.7297 0.72966216 4288 Q9C0D5 TANC1 Protein TANC1 yes yes 0 0 0 By MS/MS 2 0 1 1 61.379 53.124 2 0.00018687 71942 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 117.67 94.437 4259300 4259300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40484 4288 36167 337538 267779 267779 1 PSLPDRNDAAK Unmodified 1182.5993 0.59929991 3252 Q8IX01 SUGP2 SURP and G-patch domain-containing protein 2 yes yes 0 0 1 By MS/MS By matching By MS/MS 10 0 3 1 1 1 19.237 19.304 3 0.028562 19301 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 45.653 25.891 18319000 0 0 0 6137500 4841200 0 0 0 0 0 0 7340600 0 0 0 40485 3252 36168 337539;337540;337541 267780 267780 0 PSLQTSSAR Unmodified 945.48796 0.48795855 3208 Q86YP4 GATAD2A Transcriptional repressor p66-alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 2 1 1 1 13.821 13.88 2 0.0040314 12905 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 98.458 11.986 36654000 0 0 0 0 4369400 7602600 3915200 2703200 9224800 8839000 0 0 0 0 0 40486 3208 36169 337542;337543;337544;337545;337546;337547;337548;337549;337550;337551 267781;267782;267783;267784;267785;267786;267787;267788;267789 267785 8 PSLSGVAPLPR Unmodified 1092.6291 0.62914348 1663 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.472 63.564 2 0.00013701 72495 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 109.48 74.123 457190000 0 0 0 21482000 20815000 50261000 27467000 28687000 28148000 39981000 41565000 58078000 45240000 41300000 54167000 40487 1663 36170 337552;337553;337554;337555;337556;337557;337558;337559;337560;337561;337562;337563 267790;267791;267792;267793;267794;267795;267796;267797;267798;267799;267800;267801 267795 12 PSLTLPASAPGPEEALTTVTVAPAPR Unmodified 2542.3643 0.36426817 1546 P48634 PRRC2A Protein PRRC2A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 89.01 89.152 3 3.7694E-06 103258 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.645 36.978 17916000 0 0 0 0 0 2746100 0 1641500 2152800 0 0 4403400 0 0 6972500 40488 1546 36171 337564;337565;337566;337567;337568 267802;267803;267804;267805;267806 267803 5 PSLTPSGEFRK Unmodified 1217.6404 0.64043645 1600 P49790 NUP153 Nuclear pore complex protein Nup153 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.58 1.79 1 18 1 1 1 1 1 2 2 1 2 2 2 2 1 37.345 37.211 2;3 6.2188E-06 40914 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 104.82 92.208 601790000 43839000 0 0 22571000 26017000 46834000 35528000 44616000 49505000 41254000 51099000 66448000 65349000 48923000 59805000 40489 1600 36172 337569;337570;337571;337572;337573;337574;337575;337576;337577;337578;337579;337580;337581;337582;337583;337584;337585;337586;337587 267807;267808;267809;267810;267811;267812;267813;267814;267815;267816;267817;267818;267819;267820;267821 267808 13 PSMESGDGNTGTQTNGLDFQK Unmodified 2182.9437 0.94369027 1007 P14859 POU2F1 POU domain, class 2, transcription factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 51.85 52.02 2 4.1017E-59 57745 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 168.5 148.92 36972000 0 0 0 0 2315100 4220300 0 5361200 3998400 4546500 4448800 0 0 4321600 7760000 40490 1007 36173 337588;337589;337590;337591;337592;337593;337594;337595;337596 267822;267823;267824;267825;267826 267823 5 PSNEELR Unmodified 843.40865 0.4086456 4663 Q9NVA2 SEPT11 Septin-11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 36.507 36.691 2 0.026498 39951 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 78.616 6.6662 66472000 0 0 0 12134000 0 0 0 0 0 14241000 0 22269000 0 17828000 0 40491 4663 36174 337597;337598;337599;337600 267827;267828;267829;267830 267829 4 PSNIFLVDTK Unmodified 1132.6128 0.61282471 1091 P19525 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.164 69.159 2 0.0046426 79709 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 72.096 50.821 41831000 0 0 0 2497300 2932600 0 4187400 0 0 7105700 8179200 9262900 7666200 0 0 40492 1091 36175 337601;337602;337603;337604;337605;337606;337607;337608;337609;337610;337611;337612 267831;267832;267833;267834;267835;267836;267837;267838;267839;267840;267841;267842 267839 12 PSNILLDER Unmodified 1055.5611 0.56112349 206 O14733 MAP2K7 Dual specificity mitogen-activated protein kinase kinase 7 yes yes 0 0 0 By MS/MS 10 0 2 2 51.043 51.111 2 0.0243 57830 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 76.345 37.323 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40493 206 36176 337613;337614 267843;267844 267844 2 PSNILLDR Unmodified 926.51853 0.5185304 1491 P45985 MAP2K4 Dual specificity mitogen-activated protein kinase kinase 4 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 48.258 48.291 2 0.042137 55309 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 49.715 25.512 72752000 0 0 0 7589000 4926900 0 7154400 9832700 0 13275000 11572000 0 10413000 7989200 0 40494 1491 36177 337615;337616;337617;337618;337619;337620;337621;337622 267845 267845 1 PSNILLDRSGNIK Unmodified 1425.794 0.79397698 1491 P45985 MAP2K4 Dual specificity mitogen-activated protein kinase kinase 4 yes yes 0 0 1 By MS/MS 2 0 1 1 60.46 52.218 3 0.013176 70988 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.532 6.9797 19937000 19937000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40495 1491 36178 337623 267846;267847;267848 267848 3 PSNILVNSR Unmodified 998.55089 0.55089316 1373;2079 P36507;Q02750 MAP2K2;MAP2K1 Dual specificity mitogen-activated protein kinase kinase 2;Dual specificity mitogen-activated protein kinase kinase 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 33.373 33.563 2 2.2467E-05 36551 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 136.57 67.652 416940000 0 0 0 0 24374000 69207000 29699000 26516000 22269000 58607000 45073000 0 42312000 45734000 53145000 40496 1373;2079 36179 337624;337625;337626;337627;337628;337629;337630;337631;337632;337633 267849;267850;267851;267852;267853;267854;267855;267856;267857;267858 267854 6 PSNILVNSRGEIK Unmodified 1425.794 0.79397698 1373;2079 P36507;Q02750 MAP2K2;MAP2K1 Dual specificity mitogen-activated protein kinase kinase 2;Dual specificity mitogen-activated protein kinase kinase 1 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.43 3.96 4 3 2 1 1 1 1 1 49.047 45.491 2;3 0.0014687 63282 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.649 12.487 252620000 171560000 17704000 4800500 0 0 19293000 0 0 12324000 0 0 0 0 0 26936000 40497 1373;2079 36180 337634;337635;337636;337637;337638;337639;337640 267859;267860;267861;267862;267863;267864;267865;267866 267864 8 PSNILYVDESGNPESIR Unmodified 1888.9167 0.91667089 1672 P51812 RPS6KA3 Ribosomal protein S6 kinase alpha-3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 71.735 71.843 2 3.4773E-28 81810 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 138.42 122.88 47905000 0 0 0 0 2402400 10175000 2301500 1886800 3485400 6861800 5748800 0 5236100 4378600 5428100 40498 1672 36181 337641;337642;337643;337644;337645;337646;337647;337648;337649;337650 267867;267868;267869;267870;267871;267872;267873;267874;267875 267874 8 PSNLAVNEDCELK Unmodified 1487.6926 0.69260795 2611 Q16539 MAPK14 Mitogen-activated protein kinase 14 yes yes 0 0 0 By MS/MS By MS/MS By matching 7.33 3.77 1 2 1 1 1 47.263 45.492 2 0.0018437 51989 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 75.819 62.01 86125000 0 79947000 0 0 0 3424200 0 0 0 0 0 0 2754000 0 0 40499 2611 36182 337651;337652;337653 267876;267877 267876 2 PSNLLLGDDGHVK Unmodified 1363.7096 0.70957864 3352 Q8N5S9 CAMKK1 Calcium/calmodulin-dependent protein kinase kinase 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 3.6 3.2 4 1 1 1 2 1 52.45 49.87 3 0.002184 65400 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 63.185 48.554 129310000 191390 78139000 33839000 0 0 0 0 0 0 0 0 0 0 0 17142000 40500 3352 36183 337654;337655;337656;337657;337658 267878;267879;267880;267881 267879 3 PSNLLLNTTCDLK Unmodified 1487.7654 0.76537896 1236 P28482 MAPK1 Mitogen-activated protein kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.12 3.41 5 1 2 1 4 1 1 1 75.851 72.328 2 6.1849E-30 92091 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 164.54 0 1449700000 8210300 1408700000 4700600 0 0 0 0 0 0 0 0 0 0 8253000 19888000 40501 1236 36184 337659;337660;337661;337662;337663;337664;337665;337666 267882;267883;267884;267885;267886;267887;267888 267883 6 PSNLLVGEDGHIK Unmodified 1377.7252 0.72522871 3973 Q96RR4 CAMKK2 Calcium/calmodulin-dependent protein kinase kinase 2 yes yes 0 0 0 By MS/MS 2 0 1 1 53.175 49.262 3 0.00665 62149 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 56.482 25.267 40647000 0 0 40647000 0 0 0 0 0 0 0 0 0 0 0 0 40502 3973 36185 337667 267889 267889 0 PSNLLVNENCELK Unmodified 1528.7555 0.75554256 2247 Q13164 MAPK7 Mitogen-activated protein kinase 7 yes yes 0 0 0 By MS/MS 2 0 1 1 64.87 58.953 2 9.5551E-31 75557 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 194.17 177.49 21521000 0 21521000 0 0 0 0 0 0 0 0 0 0 0 0 0 40503 2247 36186 337668 267890 267890 1 PSNPFSGDLQK Unmodified 1188.5775 0.57750184 5293 Q9Y6R0 NUMBL Numb-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.279 51.427 2 1.4597E-07 57862 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 147.41 92.697 279500000 0 0 0 14685000 15154000 17866000 15649000 21919000 27352000 26430000 30133000 21407000 38898000 20145000 29863000 40504 5293 36187 337669;337670;337671;337672;337673;337674;337675;337676;337677;337678;337679;337680 267891;267892;267893;267894;267895;267896;267897;267898;267899;267900;267901;267902;267903;267904 267897 14 PSNPLEK Unmodified 783.41267 0.41266834 1368 P35813 PPM1A Protein phosphatase 1A yes yes 0 0 0 By MS/MS 2 0 1 1 22.635 18.752 2 0.021911 24645 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 153.04 94.869 40182000 0 40182000 0 0 0 0 0 0 0 0 0 0 0 0 0 40505 1368 36188 337681 267905;267906 267906 2 PSNSESSLGAK Unmodified 1075.5146 0.51456723 4327 Q9H0G5 NSRP1 Nuclear speckle splicing regulatory protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 9.8534 9.394 2 0.00013812 11106 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.04 58.952 72546000 4285600 27327000 0 3778700 2499600 3564100 4442700 3554900 2833900 2298300 0 6210700 3749500 2754500 5246900 40506 4327 36189 337682;337683;337684;337685;337686;337687;337688;337689;337690;337691;337692;337693;337694 267907;267908;267909;267910;267911;267912 267908 6 PSNTEDFIEDIVK Unmodified 1505.725 0.72495394 1496 P46063 RECQL ATP-dependent DNA helicase Q1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.83 3.67 3 1 2 1 2 1 1 1 88.088 85.022 2 4.9361E-139 106432 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 244.71 205.56 1118000000 98864000 987010000 18701000 0 0 0 0 0 0 0 0 0 0 3445700 10009000 40507 1496 36190 337695;337696;337697;337698;337699;337700 267913;267914;267915;267916;267917 267913 5 PSNVLINALGQVK Unmodified 1351.7823 0.78234966 1688 P52564 MAP2K6 Dual specificity mitogen-activated protein kinase kinase 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 82.025 81.456 2 1.8858E-07 94361 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 115.18 82.569 126420000 12385000 0 0 2342800 5523300 15652000 5056700 7144600 7054300 12812000 10938000 8786300 5570800 8487500 24665000 40508 1688 36191 337701;337702;337703;337704;337705;337706;337707;337708;337709;337710;337711;337712;337713 267918;267919;267920;267921;267922;267923;267924;267925;267926;267927;267928 267918 9 PSNVLINK Unmodified 883.51272 0.51271674 1505 P46734 MAP2K3 Dual specificity mitogen-activated protein kinase kinase 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 28.949 28.034 2 0.0055282 36144 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 142.64 66.51 210190000 14481000 89110000 1366700 7274000 4314000 13586000 7123600 7829800 0 15001000 10620000 12786000 10166000 0 16532000 40509 1505 36192 337714;337715;337716;337717;337718;337719;337720;337721;337722;337723;337724;337725;337726 267929;267930;267931;267932;267933;267934;267935;267936;267937;267938 267933 10 PSPAPPSTTTAPDASGPQK Unmodified 1805.8796 0.8795571 1421 P40855 PEX19 Peroxisomal biogenesis factor 19 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 34.9 35.401 2 1.9944E-06 38055 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.837 79.89 19647000 0 0 0 0 0 0 0 0 0 0 3839700 0 0 4251200 11556000 40510 1421 36193 337727;337728;337729 267939 267939 1 PSPAQAAETPALELPLPSVPAPAPL Unmodified 2433.3155 0.31552706 3580 Q8WX92 NELFB Negative elongation factor B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.4 3.98 2 1 7 1 2 2 1 1 1 2 101.18 101.43 2;3 8.6788E-09 114811 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.234 49.488 78866000 21745000 38981000 0 0 0 0 0 0 0 7665200 0 2241300 0 1496000 6737800 40511 3580 36194 337730;337731;337732;337733;337734;337735;337736;337737;337738;337739 267940;267941;267942;267943;267944;267945;267946 267943 7 PSPATVRSTDPVTTK Unmodified 1555.8206 0.82058566 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 34.133 29.341 3 0.0023858 40958 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 59.248 40.79 198310000 153470000 26850000 17983000 0 0 0 0 0 0 0 0 0 0 0 0 40512 5216 36195 337740;337741;337742 267947;267948;267949;267950 267948 3 PSPCLVGEASKPPAPSEGSPK Unmodified 2091.0307 0.030654787 4801 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 47.666 47.849 3 0.00072538 52893 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.893 36.174 68830000 0 0 0 0 4489700 8885800 5054200 0 4658700 12176000 8069100 0 6585300 7882500 11029000 40513 4801 36196 337743;337744;337745;337746;337747;337748;337749;337750;337751 267951;267952;267953;267954;267955;267956;267957;267958;267959 267955 9 PSPFEGK Unmodified 760.37555 0.37555455 3955 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.37 20.571 2 0.023384 21410 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 88.029 39.855 491340000 0 0 0 23206000 21592000 38285000 30539000 28958000 29904000 38003000 49218000 53914000 55646000 54456000 67616000 40514 3955 36197 337752;337753;337754;337755;337756;337757;337758;337759;337760;337761;337762;337763 267960;267961;267962;267963;267964;267965;267966;267967;267968 267960 9 PSPIQEESIPIALSGR Unmodified 1692.9046 0.90464964 1199 P26196 DDX6 Probable ATP-dependent RNA helicase DDX6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 80.814 80.873 2;3 5.4138E-32 93157 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 179.46 162.52 602170000 0 0 0 21987000 35043000 50417000 37074000 40512000 35397000 57813000 56311000 68764000 43739000 51826000 103280000 40515 1199 36198 337764;337765;337766;337767;337768;337769;337770;337771;337772;337773;337774;337775;337776;337777;337778;337779;337780;337781;337782;337783;337784;337785;337786;337787 267969;267970;267971;267972;267973;267974;267975;267976;267977;267978;267979;267980;267981;267982;267983 267973 14 PSPLLLQYSVK Unmodified 1243.7176 0.71762413 4130 Q9BSM1 PCGF1 Polycomb group RING finger protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.111 78.172 2 0.0005416 90093 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 81.865 76.518 95147000 0 0 0 6254700 5197200 10914000 5243200 4850300 5903700 10068000 6631000 8164300 7348600 8023300 16549000 40516 4130 36199 337788;337789;337790;337791;337792;337793;337794;337795;337796;337797;337798;337799 267984;267985;267986;267987;267988;267989;267990;267991;267992;267993;267994;267995 267986 12 PSPLLVGR Unmodified 837.50724 0.50723743 2263;5028 Q9UN86;Q13283 G3BP2;G3BP1 Ras GTPase-activating protein-binding protein 2;Ras GTPase-activating protein-binding protein 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.882 46.051 2 0.0086853 51064 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 85.359 40.638 917190000 0 0 0 74732000 61749000 92472000 89718000 73725000 57979000 78069000 96861000 88188000 66210000 49831000 87656000 40517 5028;2263 36200 337800;337801;337802;337803;337804;337805;337806;337807;337808;337809;337810;337811 267996;267997;267998;267999;268000;268001;268002 267997 7 PSPLPVIPDTIK Unmodified 1275.7438 0.74383889 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 82.074 80.957 2 1.7996E-05 100894 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.16 103.83 409460000 4760200 271550000 6529300 3086000 4114300 28879000 5569300 5627400 10758000 12347000 12162000 9450900 7506900 9937900 17185000 40518 3119 36201 337812;337813;337814;337815;337816;337817;337818;337819;337820;337821;337822;337823;337824;337825;337826;337827 268003;268004;268005;268006;268007;268008;268009;268010;268011;268012;268013 268005 11 PSPLTLAPHDFANIK Unmodified 1619.8671 0.86714192 1720 P53618 COPB1 Coatomer subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.48 3.65 8 2 21 5 3 2 1 2 2 2 1 2 2 2 2 2 1 2 80.095 78.618 2;3 4.4436E-36 100570 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 223.08 208.38 3782800000 1574100000 1043300000 180880000 19625000 34196000 137070000 38026000 59312000 59604000 113970000 68168000 90378000 60487000 79761000 223930000 40519 1720 36202 337828;337829;337830;337831;337832;337833;337834;337835;337836;337837;337838;337839;337840;337841;337842;337843;337844;337845;337846;337847;337848;337849;337850;337851;337852;337853;337854;337855;337856;337857;337858 268014;268015;268016;268017;268018;268019;268020;268021;268022;268023;268024;268025;268026;268027;268028;268029;268030;268031;268032;268033;268034;268035;268036;268037;268038 268027 23 PSPNIPIELIPHINK Unmodified 1680.9563 0.95629128 2759 Q5SW79 CEP170 Centrosomal protein of 170 kDa yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 85.743 85.13 3 2.8324E-10 98655 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.842 78.405 98856000 13735000 0 0 0 0 9201200 3652700 8814900 8494000 8971200 5883000 7731600 5139100 5818800 21414000 40520 2759 36203 337859;337860;337861;337862;337863;337864;337865;337866;337867;337868;337869 268039;268040;268041;268042;268043;268044;268045;268046;268047;268048;268049;268050;268051 268042 12 PSQELLEYNIQQK Unmodified 1588.8097 0.80968662 4077 Q99996 AKAP9 A-kinase anchor protein 9 yes yes 0 0 0 By MS/MS 2 0 1 1 69.212 63.343 2 4.9196E-13 80699 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.86 103.12 45528000 0 45528000 0 0 0 0 0 0 0 0 0 0 0 0 0 40521 4077 36204 337870 268052 268052 1 PSQHIGTGNLYIDSR Unmodified 1656.822 0.82198264 5062 Q9UPW0 FOXJ3 Forkhead box protein J3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 49.863 49.934 3 0.00073811 56563 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 58.814 46.668 82991000 0 0 0 5203600 4813300 0 7655900 8267000 8202000 6656300 0 0 15907000 10540000 15746000 40522 5062 36205 337871;337872;337873;337874;337875;337876;337877;337878;337879;337880 268053;268054;268055;268056;268057;268058;268059;268060;268061 268054 9 PSQLQAHTPASQQTPPLPPYASPR Unmodified 2568.3085 0.30848463 3994 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.429 66.514 3 6.6264E-05 76417 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 37.801 31.458 124700000 0 0 0 7578500 6692500 13113000 11202000 8592100 5510600 8563800 11339000 13401000 10786000 10848000 17074000 40523 3994 36206 337881;337882;337883;337884;337885;337886;337887;337888;337889;337890;337891;337892 268062;268063;268064;268065;268066;268067;268068;268069;268070;268071;268072 268063 2 PSQPGEGLK Unmodified 911.47125 0.47124585 731 P00519 ABL1 Tyrosine-protein kinase ABL1 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 14.794 14.887 2 0.017758 14555 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 95.909 52.14 54522000 0 0 0 5723100 3790700 5826700 5817700 0 6809400 0 0 10311000 8226300 8016500 0 40524 731 36207 337893;337894;337895;337896;337897;337898;337899;337900 268073;268074;268075;268076;268077 268073 0 PSQSPSQEAAGEAVLGAK Unmodified 1725.8533 0.85334235 731 P00519 ABL1 Tyrosine-protein kinase ABL1 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 48.693 48.991 2 0.0024737 55161 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 66.004 53.378 12862000 0 0 0 0 0 0 0 0 5579000 0 7282900 0 0 0 0 40525 731 36208 337901;337902 268078 268078 0 PSQTLQYFPR Unmodified 1235.6299 0.62987176 165 O00512 BCL9 B-cell CLL/lymphoma 9 protein yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 60.273 60.324 2 0.0096771 68751 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 69.812 53.609 35946000 0 0 0 1916100 2477500 0 4714200 2838700 3244800 4832300 7198700 5819500 0 2904200 0 40526 165 36209 337903;337904;337905;337906;337907;337908;337909;337910;337911 268079;268080 268080 2 PSQVVAETR Unmodified 985.51926 0.51925868 980 P13639 EEF2 Elongation factor 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 14.984 15.219 2 0.0036005 13934 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 102.62 58.887 119420000 0 0 0 5878800 0 0 6701800 5524600 0 4480700 26638000 14051000 0 13101000 43043000 40527 980 36210 337912;337913;337914;337915;337916;337917;337918;337919 268081;268082;268083;268084;268085;268086 268081 6 PSRGTRPEDSSVLIPTDNSTPHK Unmodified 2490.2463 0.2462783 114 L0R819 ASNSD1 yes yes 0 0 2 By MS/MS 2 0 3 3 49.713 41.888 3;4;5 0.00053228 57796 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.902 41.614 122370000 122370000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40528 114 36211 337920;337921;337922 268087;268088;268089;268090 268088 3 PSRLYDAYELK Unmodified 1353.6929 0.69286595 873 P08758 ANXA5 Annexin A5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.18 0.386 9 2 5 3 3 59.827 53.79 2;3 0.00030247 73428 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.365 70.965 5066800000 3191200000 1763000000 112530000 0 0 0 0 0 0 0 0 0 0 0 0 40529 873 36212 337923;337924;337925;337926;337927;337928;337929;337930;337931;337932;337933 268091;268092;268093;268094;268095;268096;268097;268098;268099;268100;268101;268102;268103;268104;268105;268106 268100 14 PSRPDMNPIR Unmodified 1181.5975 0.59752577 3313 Q8N1G2 CMTR1 Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 yes yes 0 0 1 By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 30.669 30.897 3 0.015341 33750 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 45.879 25.889 75262000 0 0 0 0 4285700 7523600 5951000 5908200 4475200 8413600 6557600 10056000 0 8288700 13803000 40530 3313 36213 337934;337935;337936;337937;337938;337939;337940;337941;337942;337943 268107;268108 268107 2 PSSAITVIDHSPANSSPRGK Unmodified 2020.0338 0.033766329 5196 Q9Y4E5 ZNF451 Zinc finger protein 451 yes yes 0 0 1 By MS/MS 2 0 1 1 51.695 43.733 4 4.6747E-05 60246 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.617 45.538 15199000 15199000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40531 5196 36214 337944 268109 268109 1 PSSALPVTAYDK Unmodified 1247.6398 0.63976774 4760 Q9NZ52 GGA3 ADP-ribosylation factor-binding protein GGA3 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 56.087 50.273 2 0.014584 65016 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.566 44.111 7928200 0 7928200 0 0 0 0 0 0 0 0 0 0 0 0 0 40532 4760 36215 337945;337946 268110;268111 268110 2 PSSAPELQAVR Unmodified 1153.6091 0.60913632 190 O14579 COPE Coatomer subunit epsilon yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.419 40.598 2 3.556E-15 43986 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 158.76 107.56 237840000 0 0 0 10866000 9726400 26893000 9526000 11082000 16879000 23532000 28885000 26139000 17041000 19174000 38093000 40533 190 36216 337947;337948;337949;337950;337951;337952;337953;337954;337955;337956;337957;337958 268112;268113;268114;268115;268116;268117;268118;268119;268120;268121;268122;268123;268124;268125 268116 13 PSSAVNHTISGK Unmodified 1196.6149 0.61494998 3669 Q92833 JARID2 Protein Jumonji yes yes 0 0 0 By MS/MS 2 0 1 1 16.011 11.899 3 0.0079588 17496 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.871 32.185 16041000 16041000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40534 3669 36217 337959 268126 268126 0 PSSDAESRDHPSSHSAQPPRK Unmodified 2272.0581 0.0580836 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 0 2 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 6.8758 6.6652 4;5 0.010133 10331 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 34.372 30.344 61775000 21457000 0 0 2266500 0 2244100 1816200 0 2741900 6418100 3516200 4915000 4648100 4453500 7298300 40535 645 36218 337960;337961;337962;337963;337964;337965;337966;337967;337968;337969;337970 268127;268128 268128 1 PSSDLETSK Unmodified 962.45566 0.45565537 4616 Q9NRY5 FAM114A2 Protein FAM114A2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 9.1105 9.2198 2 0.021061 7908 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 52.591 28.796 24959000 0 0 0 2022700 1384300 3519800 2608200 0 2927900 2364300 0 3419000 2394100 1102300 3216800 40536 4616 36219 337971;337972;337973;337974;337975;337976;337977;337978;337979;337980 268129 268129 1 PSSEGLAIVTK Unmodified 1100.6077 0.60773933 916 P10155 TROVE2 60 kDa SS-A/Ro ribonucleoprotein yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 7.7 3.52 2 1 7 2 1 1 1 1 1 1 1 1 50.37 49.012 2 2.4748E-05 54238 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 121.41 88.149 261410000 0 200430000 7506800 4088500 0 0 3246500 3224800 5019600 0 0 0 6720900 9106100 22065000 40537 916 36220 337981;337982;337983;337984;337985;337986;337987;337988;337989;337990 268130;268131;268132;268133;268134;268135;268136 268132 5 PSSETASSGLTSK Unmodified 1250.599 0.59902514 4733 Q9NXV6 CDKN2AIP CDKN2A-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16.044 15.618 2 2.4794E-166 15414 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 226.71 133.33 402900000 5393500 13231000 0 22262000 14500000 23012000 22828000 13557000 17086000 29401000 41835000 51642000 37604000 34518000 76036000 40538 4733 36221 337991;337992;337993;337994;337995;337996;337997;337998;337999;338000;338001;338002;338003;338004 268137;268138;268139;268140;268141;268142;268143;268144;268145;268146;268147;268148;268149;268150;268151;268152;268153;268154;268155 268139 19 PSSFFLQMQK Unmodified 1211.6009 0.60087982 2708 Q53SF7 COBLL1 Cordon-bleu protein-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 75.089 75.123 2 0.0063013 86167 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.474 45.77 17060000 0 0 0 0 1978900 3708300 0 2935400 0 0 0 0 0 0 8437700 40539 2708 36222 338005;338006;338007;338008 268156;268157 268157 2 PSSGTVQELNFR Unmodified 1333.6626 0.66262845 2231;180 Q13085;O00763 ACACA;ACACB Acetyl-CoA carboxylase 1;Biotin carboxylase;Acetyl-CoA carboxylase 2;Biotin carboxylase no no 0 0 0 By MS/MS 10 0 1 1 54.399 54.466 2 0.00085814 61848 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 73.499 50.071 7474000 0 0 0 0 0 7474000 0 0 0 0 0 0 0 0 0 40540 2231;180 36223 338009 268158;268159 268159 2 PSSHSQYTSSGSVSSSGSK Unmodified 1855.8184 0.8184134 2558 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 12.896 9.7658 3 8.8421E-05 14671 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.617 52.696 19951000 18330000 0 1621500 0 0 0 0 0 0 0 0 0 0 0 0 40541 2558 36224 338010;338011 268160;268161 268160 2 PSSINYMVAPVTGNDVGIR Oxidation (M) 2004.9939 0.99387535 168 O00560 SDCBP Syntenin-1 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 74.384 74.522 2 1.3724E-48 85854 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 132.47 119.49 33945000 0 0 0 0 0 2947400 4411000 0 0 5074500 7162000 6945200 3351400 4053800 0 40542 168 36225 338012;338013;338014;338015;338016;338017;338018;338019 268162;268163;268164;268165;268166;268167 268163 234 6 PSSINYMVAPVTGNDVGIR Unmodified 1988.999 0.99896073 168 O00560 SDCBP Syntenin-1 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 80.695 80.897 2 0.00037203 93524 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 51.211 45.366 9044700 0 0 0 0 0 0 0 2693800 0 0 0 0 0 0 6350900 40543 168 36225 338020;338021 268168 268168 1 PSSLMNPSLSK Unmodified 1159.5907 0.59070906 2558 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 47.214 47.324 2 0.035845 53457 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 50.297 26.142 10989000 0 0 0 0 0 4577600 0 0 0 6411800 0 0 0 0 0 40544 2558 36226 338022;338023 268169 268169 1 PSSNLLEEAAAK Unmodified 1228.6299 0.62993134 3065 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 59.197 53.354 2 2.1028E-07 59278 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 114.9 86.885 74537000 0 74537000 0 0 0 0 0 0 0 0 0 0 0 0 0 40545 3065 36227 338024;338025;338026;338027;338028;338029 268170;268171;268172;268173;268174;268175 268174 6 PSSPSPDLPFTTPAPK Unmodified 1637.8301 0.83008771 5210 Q9Y4U1 MMACHC Methylmalonic aciduria and homocystinuria type C protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 75.459 75.149 2 1.9256E-84 86303 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 189.33 174.12 232810000 0 53228000 0 9060800 8740400 20264000 13663000 12912000 11486000 18144000 13667000 21378000 14029000 13974000 22260000 40546 5210 36228 338030;338031;338032;338033;338034;338035;338036;338037;338038;338039;338040;338041;338042 268176;268177;268178;268179;268180;268181;268182;268183;268184;268185;268186;268187;268188;268189;268190;268191 268181 16 PSSSPVIFAGGQDR Unmodified 1416.6997 0.69974224 2521 Q15366 PCBP2 Poly(rC)-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 1 2 1 53.436 53.582 2 1.161E-12 61972 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 107.06 86.278 3634600000 0 0 0 249920000 174220000 399240000 6519900 257440000 201710000 397770000 391180000 384090000 336580000 322500000 513430000 40547 2521 36229 338043;338044;338045;338046;338047;338048;338049;338050;338051;338052;338053;338054;338055 268192;268193;268194;268195;268196;268197;268198;268199;268200;268201 268200 9 PSSSRLCDTSSARQESTSK Unmodified 2082.96 0.96000904 2835 Q5W0B1 RNF219 RING finger protein 219 yes yes 0 0 2 By MS/MS 2 0 2 2 16.503 12.294 3;4 0.00040919 18042 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.41 53.217 49334000 49334000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40548 2835 36230 338056;338057 268202;268203 268202 2 PSSSSPVAYVETK Unmodified 1350.6667 0.66671078 2439 Q14694 USP10 Ubiquitin carboxyl-terminal hydrolase 10 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 47.408 47.119 2 8.7124E-14 59398 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.72 107.5 144420000 0 51454000 0 4893700 4583000 10960000 5949400 5255000 5501000 9824600 9006600 10767000 9587200 5669200 10967000 40549 2439 36231 338058;338059;338060;338061;338062;338063;338064;338065;338066;338067;338068;338069;338070 268204;268205;268206;268207;268208;268209;268210;268211;268212;268213;268214;268215 268207 12 PSSTLQYFPK Unmodified 1166.5972 0.59717465 3155 Q86UU0 BCL9L B-cell CLL/lymphoma 9-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 59.327 58.796 2 1.2357E-09 66375 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 143.7 123.93 316500000 36144000 0 0 14129000 16454000 18282000 20559000 17552000 19811000 25731000 25468000 26119000 27939000 29678000 38632000 40550 3155 36232 338071;338072;338073;338074;338075;338076;338077;338078;338079;338080;338081;338082;338083 268216;268217;268218;268219;268220;268221;268222;268223;268224;268225;268226;268227 268225 10 PSTANVTR Unmodified 844.44028 0.44028008 904 P0CW18 PRSS56 Serine protease 56 yes yes 0 0 0 By MS/MS 10 0 1 1 32.595 32.173 2 0.025549 35182 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 58.604 7.7065 36011000 0 0 0 0 36011000 0 0 0 0 0 0 0 0 0 0 40551 904 36233 338084 268228 268228 1 PSTASAVPELATDPELEK Unmodified 1853.9258 0.92583859 3141 Q86U44 METTL3 N6-adenosine-methyltransferase 70 kDa subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 73.132 72.66 2 2.7863E-57 89811 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 153.39 137.85 105180000 0 48459000 0 6205200 4272200 0 6022400 3875400 5022300 8827700 8610700 0 5886700 8002000 0 40552 3141 36234 338085;338086;338087;338088;338089;338090;338091;338092;338093;338094;338095;338096;338097 268229;268230;268231;268232;268233;268234;268235;268236;268237;268238;268239;268240;268241 268232 13 PSTDLSAPVNGEATSQK Unmodified 1700.8217 0.82170787 3102 Q7Z4V5 HDGFRP2 Hepatoma-derived growth factor-related protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 40.349 40.528 2 2.2718E-71 44870 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 219.42 213.44 147140000 0 0 0 6773100 6603100 11692000 8038000 8703800 13289000 12391000 17055000 16294000 18215000 11467000 16617000 40553 3102 36235 338098;338099;338100;338101;338102;338103;338104;338105;338106;338107;338108;338109;338110 268242;268243;268244;268245;268246;268247;268248;268249;268250;268251;268252;268253 268248 12 PSTEDLGDK Unmodified 960.44001 0.4400053 1942 P63165 SUMO1 Small ubiquitin-related modifier 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 15.455 12.022 2 0.02401 15909 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.708 28.794 48781000 0 48781000 0 0 0 0 0 0 0 0 0 0 0 0 0 40554 1942 36236 338111;338112 268254 268254 1 PSTEDLGDKK Unmodified 1088.535 0.53496832 1942 P63165 SUMO1 Small ubiquitin-related modifier 1 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 11.847 8.5126 2 0.0011378 10898 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 118.5 82.31 49379000 0 49379000 0 0 0 0 0 0 0 0 0 0 0 0 0 40555 1942 36237 338113;338114 268255 268255 1 PSTEQLLK Unmodified 914.5073 0.50729701 695 O95819 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 yes yes 0 0 0 By MS/MS 2 0 1 1 58.658 52.827 2 0.0098887 67908 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.7 26.261 22021000 0 22021000 0 0 0 0 0 0 0 0 0 0 0 0 0 40556 695 36238 338115 268256 268256 1 PSTFAYPAPLEVPK Unmodified 1515.7973 0.79733102 4011 Q99460 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 81.366 80.249 2 5.9956E-34 97355 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 155.48 120.76 4972800000 65421000 3721900000 44008000 46967000 90473000 97853000 25946000 29797000 27063000 203120000 190050000 257560000 26155000 42971000 103590000 40557 4011 36239 338116;338117;338118;338119;338120;338121;338122;338123;338124;338125;338126;338127;338128;338129;338130;338131 268257;268258;268259;268260;268261;268262;268263;268264;268265;268266;268267;268268;268269;268270;268271;268272;268273 268268 16 PSTIIGVAGAGR Unmodified 1097.6193 0.61930707 1154 P23368 ME2 NAD-dependent malic enzyme, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 49.994 50.063 2 9.6975E-11 56344 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 147.2 102.85 601870000 0 0 0 34016000 54810000 52520000 55885000 53847000 69724000 77477000 102090000 101510000 0 0 0 40558 1154 36240 338132;338133;338134;338135;338136;338137;338138;338139;338140 268274;268275;268276;268277;268278;268279;268280;268281;268282;268283;268284;268285;268286 268282 13 PSTQYGAPGPFAAPGEGGALAATGRPPLLPTR Unmodified 3074.5938 0.59376761 3968 Q96RK0 CIC Protein capicua homolog yes yes 0 0 1 By MS/MS 10 0 1 1 83.993 84.172 3 1.9112E-48 97179 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.113 80.691 8783000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8783000 40559 3968 36241 338141 268287 268287 1 PSTSGDSLQSGSIPLANESLEHK Unmodified 2353.1397 0.13974754 2830 Q5VZ89 DENND4C DENN domain-containing protein 4C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.472 67.554 3 2.0447E-20 77924 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 86.625 81.758 97433000 0 0 0 6002600 3122600 12648000 6047900 9629400 8270800 8148200 10337000 7386000 7316300 7517300 11008000 40560 2830 36242 338142;338143;338144;338145;338146;338147;338148;338149;338150;338151;338152;338153 268288;268289;268290;268291;268292;268293;268294;268295;268296;268297;268298;268299;268300;268301;268302 268300 15 PSTSSQPILSAPGPTK Unmodified 1566.8253 0.82533668 5004 Q9ULT8 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 49.323 49.398 2 2.0896E-15 55558 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 135.94 130.62 124550000 0 0 0 8281300 6245800 12477000 12416000 9430300 0 21638000 18932000 0 0 8241900 26887000 40561 5004 36243 338154;338155;338156;338157;338158;338159;338160;338161;338162;338163 268303;268304;268305;268306;268307;268308;268309;268310;268311;268312 268308 10 PSTSSVNVLGHK Unmodified 1224.6463 0.64625011 4959 Q9UKA4 AKAP11 A-kinase anchor protein 11 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 36.691 31.739 3 0.014472 44229 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 44.82 27.794 22532000 17535000 0 4997700 0 0 0 0 0 0 0 0 0 0 0 0 40562 4959 36244 338164;338165 268313;268314 268313 1 PSTSTAVFGTVSATPSSSLPK Unmodified 2021.0317 0.031700644 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By matching By MS/MS By matching By matching 10 0 4 1 1 1 1 74.672 74.762 2 0.00118 86322 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 39.163 35.447 17377000 0 0 0 0 2498200 0 0 0 0 0 4059900 0 0 2900100 7919300 40563 965 36245 338166;338167;338168;338169 268315 268315 1 PSTTYQQPDSSYGACGGHK Unmodified 2039.8643 0.86431774 4254 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 29.999 25.604 3 3.2255E-05 33456 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 43.116 39.396 19825000 0 19825000 0 0 0 0 0 0 0 0 0 0 0 0 0 40564 4254 36246 338170;338171 268316;268317 268317 2 PSVAHFGSEK Unmodified 1057.5193 0.51925868 5196 Q9Y4E5 ZNF451 Zinc finger protein 451 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 26.43 22.191 2 0.017256 27867 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 66.568 53.531 9708800 6853400 0 2855500 0 0 0 0 0 0 0 0 0 0 0 0 40565 5196 36247 338172;338173 268318 268318 1 PSVDEILK Unmodified 899.4964 0.49639797 3384 Q8NB16 MLKL Mixed lineage kinase domain-like protein yes yes 0 0 0 By MS/MS 10 0 1 1 83.97 84.07 2 0.038808 97366 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 50.898 12.062 2784100 0 0 0 0 0 0 0 0 0 2784100 0 0 0 0 0 40566 3384 36248 338174 268319 268319 1 PSVDYVCQLK Unmodified 1207.5907 0.59070906 370 O43813 LANCL1 LanC-like protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.12 2.32 1 7 1 1 1 1 1 1 1 1 55.431 55.037 2 0.0055527 61564 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.205 55.635 56056000 0 19970000 0 0 1265900 2498700 0 0 0 0 7943600 7883300 4755200 3348100 8391500 40567 370 36249 338175;338176;338177;338178;338179;338180;338181;338182 268320;268321;268322;268323;268324 268320 4 PSVEGQQPAAAAACEPVDHAQSESILK Unmodified 2789.329 0.32902165 2646 Q27J81 INF2 Inverted formin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 62.686 61.503 3 2.5216E-126 70633 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 141.5 137.86 438600000 7187400 192060000 0 11485000 15612000 25036000 14535000 17747000 13797000 23036000 23087000 27160000 21513000 19855000 26489000 40568 2646 36250 338183;338184;338185;338186;338187;338188;338189;338190;338191;338192;338193;338194;338195;338196;338197 268325;268326;268327;268328;268329;268330;268331;268332;268333;268334;268335;268336;268337;268338;268339;268340 268340 16 PSVEPSAGHDEL Unmodified 1236.5622 0.5622457 4520 Q9HCN8 SDF2L1 Stromal cell-derived factor 2-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 40.746 39.894 2 3.1079E-14 48536 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 135.83 123.78 381660000 0 285020000 5023500 2762700 3402200 8891200 3349600 4068300 6039300 9619000 14391000 13239000 0 8704400 17153000 40569 4520 36251 338198;338199;338200;338201;338202;338203;338204;338205;338206;338207;338208;338209;338210;338211;338212 268341;268342;268343;268344;268345;268346;268347;268348;268349;268350;268351;268352;268353;268354;268355;268356 268348 16 PSVEPVEEYDYEDLK Unmodified 1810.8149 0.81489116 5184 Q9Y450 HBS1L HBS1-like protein yes yes 0 0 0 By MS/MS 2 0 1 1 75.529 70.589 2 2.9689E-12 88389 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.76 117.08 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40570 5184 36252 338213 268357 268357 1 PSVFGNDSDDDDETSVSESLQREAAK Unmodified 2797.2162 0.21621954 4327 Q9H0G5 NSRP1 Nuclear speckle splicing regulatory protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 75.558 67.427 3 0.040469 89045 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 29.745 22.633 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40571 4327 36253 338214 268358 268358 1 PSVGSISLGLPR Unmodified 1181.6768 0.67682195 488 O75376 NCOR1 Nuclear receptor corepressor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.881 77.94 2 0.00032657 89856 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 82.029 55.14 119630000 0 0 0 4784000 6112400 11855000 6070000 7779700 7733700 14017000 13704000 12939000 8507700 10149000 15979000 40572 488 36254 338215;338216;338217;338218;338219;338220;338221;338222;338223;338224;338225;338226 268359;268360;268361;268362;268363;268364;268365;268366;268367 268361 9 PSVHVHDNRPASNVVVTER Unmodified 2112.0824 0.082447857 2075 Q02413 DSG1 Desmoglein-1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 10 3 1 1 1 3 1 33.952 34.265 4 6.8453E-06 37155 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 69.747 60.089 87112000 0 0 0 0 0 0 0 37598000 4080800 0 7597100 14145000 19711000 3979900 0 40573 2075 36255 338227;338228;338229;338230;338231;338232;338233;338234;338235;338236 268368;268369;268370;268371;268372;268373;268374;268375 268370 7 PSVHVVMNLPAK Unmodified 1290.7118 0.71182725 2664 Q32P41 TRMT5 tRNA (guanine(37)-N1)-methyltransferase yes yes 0 0 0 By MS/MS 2 0 1 1 70.334 62.049 3 0.0064533 82755 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.023 48.303 7297100 7297100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40574 2664 36256 338237 268376 268376 1 PSVISQQELPDSHLTEEALK Unmodified 2220.1274 0.12739194 3492 Q8TCU4 ALMS1 Alstrom syndrome protein 1 yes yes 0 0 0 By MS/MS 3 0 1 1 77.884 74.465 3 0.029341 89401 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 23.447 8.0256 4808100 0 4808100 0 0 0 0 0 0 0 0 0 0 0 0 0 40575 3492 36257 338238 268377 268377 1 PSVQMSHLESLASSK Unmodified 1599.7927 0.79265635 2301 Q13495 MAMLD1 Mastermind-like domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60.98 60.212 3 1.1679E-31 81767 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 114.63 104.83 158430000 33199000 0 2093400 3491500 5322500 10227000 6660800 10605000 5924100 14419000 11028000 15589000 8017300 9817300 22033000 40576 2301 36258 338239;338240;338241;338242;338243;338244;338245;338246;338247;338248;338249;338250;338251;338252 268378;268379;268380;268381;268382 268381 5 PSVQMSHLESLASSK Oxidation (M) 1615.7876 0.78757097 2301 Q13495 MAMLD1 Mastermind-like domain-containing protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 42.643 41.995 3 0.000356 46281 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.703 45.557 93474000 11387000 0 0 5691100 0 0 12499000 7775700 8948600 0 10617000 14087000 0 8057200 14410000 40577 2301 36258 338253;338254;338255;338256;338257;338258;338259;338260;338261 268383;268384;268385;268386 268386 3765 4 PSVTEEK Unmodified 788.3916 0.39159855 4574 Q9NQS1 AVEN Cell death regulator Aven yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 7.4435 4.7061 2 0.027753 6751 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.033 20.2 36073000 0 34857000 1216800 0 0 0 0 0 0 0 0 0 0 0 0 40578 4574 36259 338262;338263 268387 268387 1 PSVVSLQNLIVR Unmodified 1323.7874 0.78743503 3693 Q92974 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 86.246 86.27 2 1.2121E-14 99974 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 155.42 106.63 74884000 0 0 0 2133100 0 10169000 0 0 0 17005000 0 0 7692000 7045100 30840000 40579 3693 36260 338264;338265;338266;338267;338268;338269;338270;338271;338272;338273 268388;268389;268390;268391;268392;268393;268394;268395;268396;268397 268389 10 PSVYLSTPSSASK Unmodified 1322.6718 0.67179615 5236 Q9Y5K6 CD2AP CD2-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 2 1 1 46.327 44.45 2 2.3119E-10 56576 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 149.94 128.5 70482000 12802000 26834000 0 0 0 0 0 0 0 0 9079800 6967200 6225800 0 8572600 40580 5236 36261 338274;338275;338276;338277;338278;338279;338280;338281;338282;338283;338284 268398;268399;268400;268401;268402;268403;268404;268405;268406;268407;268408;268409 268401 12 PSWADQVEEEGEDDK Unmodified 1732.7064 0.70640334 546 O75821 EIF3G Eukaryotic translation initiation factor 3 subunit G yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 56.577 55.25 2 2.7853E-80 68436 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 202.29 192.86 294410000 14304000 170810000 1810100 2472600 3825000 9828200 3767500 4665000 5020400 7343500 14117000 13676000 7611600 9766200 25391000 40581 546 36262 338285;338286;338287;338288;338289;338290;338291;338292;338293;338294;338295;338296;338297;338298;338299;338300 268410;268411;268412;268413;268414;268415;268416;268417;268418;268419;268420;268421;268422;268423;268424;268425 268413 16 PSWALSVSRSSTDTK Unmodified 1620.8107 0.81074925 5370 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 2 2 1 27.985 28.207 3 0.012204 30231 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 22.991 4.6003 + 66165000 0 0 0 0 0 0 12831000 37312000 9600300 0 0 6421300 0 0 0 40582 5370 36263 338301;338302;338303;338304;338305;338306 268426;268427 268426 2 PSYAEICQR Unmodified 1122.5128 0.51279309 3640 Q92615 LARP4B La-related protein 4B yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 34.45 34.453 2 0.0077875 37551 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 71.501 41.316 7515500 0 0 0 728450 0 0 0 0 3452700 0 0 0 0 3334300 0 40583 3640 36264 338307;338308;338309 268428;268429 268428 2 PSYAFGSVGK Unmodified 1011.5025 0.50254598 2080 Q02790 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 47.972 46.681 2 3.7539E-06 62603 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 147.2 105.09 6751900000 2641000000 2502800000 178520000 51536000 34779000 97054000 73425000 58128000 53683000 112690000 178770000 183270000 83008000 129510000 373790000 40584 2080 36265 338310;338311;338312;338313;338314;338315;338316;338317;338318;338319;338320;338321;338322;338323;338324;338325 268430;268431;268432;268433;268434;268435;268436;268437;268438;268439;268440;268441;268442;268443;268444;268445;268446;268447;268448;268449;268450;268451;268452;268453;268454;268455 268440 25 PSYDTETDPSEGLMNVLK Oxidation (M) 2010.9092 0.90920225 4497 Q9HB71 CACYBP Calcyclin-binding protein yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.24 2 1 10 1 2 1 1 1 1 1 1 1 1 1 1 77.117 75.946 2 3.4153E-82 92956 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 193.15 181.17 274670000 7889600 194550000 0 0 2020700 17140000 3108700 2496200 0 8225100 8641100 9196900 5355800 6121100 9931900 40585 4497 36266 338326;338327;338328;338329;338330;338331;338332;338333;338334;338335;338336;338337;338338 268456;268457;268458;268459;268460;268461;268462;268463;268464;268465;268466;268467 268459 5932 12 PSYDTETDPSEGLMNVLK Unmodified 1994.9143 0.91428762 4497 Q9HB71 CACYBP Calcyclin-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.25 3.34 4 2 2 1 4 1 1 1 86.116 82.797 2;3 0 102988 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 321.86 308.45 951840000 12929000 919940000 1985000 0 0 9928500 0 0 0 0 0 0 0 7054300 0 40586 4497 36266 338339;338340;338341;338342;338343;338344;338345;338346 268468;268469;268470;268471;268472;268473;268474 268469 5 PSYEAIPESSPPSGITSASNTTPGEPAASSSR Unmodified 3131.4531 0.45309577 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 69.22 69.232 3 0.0008455 79215 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 23.983 19.582 24988000 0 0 0 2195000 3082500 0 3559600 0 2447800 2625000 0 0 2638900 3229000 5210200 40587 1364 36267 338347;338348;338349;338350;338351;338352;338353;338354 268475 268475 1 PSYEAIPESSPPSGITSASNTTPGEPAASSSRPVAPSGTALSTTSSK Unmodified 4516.1729 0.17290475 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 73.654 73.819 4 1.0009E-129 85151 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 106.61 102.94 167390000 0 0 0 0 0 20559000 12103000 14086000 16212000 19596000 16668000 16802000 17787000 16055000 17526000 40588 1364 36268 338355;338356;338357;338358;338359;338360;338361;338362;338363;338364 268476;268477;268478;268479;268480;268481;268482;268483;268484;268485;268486;268487;268488 268488 13 PSYGSGYQSHQGQQQSYNQSPYSNYGPPQGK Unmodified 3418.4875 0.48752422 2207 Q12906 ILF3 Interleukin enhancer-binding factor 3 yes yes 0 0 0 By MS/MS 2 0 1 1 56.391 48.244 3 7.8929E-13 65887 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.683 60.958 37729000 37729000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40589 2207 36269 338365 268489 268489 1 PSYQEEAVTK Unmodified 1150.5506 0.55061839 212 O14773 TPP1 Tripeptidyl-peptidase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 23.312 23.603 2 0.031229 25126 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 54.191 36.805 40000000 0 0 0 7082100 0 1960300 0 3618900 1188200 0 4837100 7552800 5086600 2929400 5744400 40590 212 36270 338366;338367;338368;338369;338370;338371;338372;338373;338374 268490 268490 1 PTAAMDVPDVGNMVSDLPGLK Unmodified 2126.0388 0.038776632 3004 Q6ZRI6 C15orf39 Uncharacterized protein C15orf39 yes yes 0 0 0 By MS/MS 2 0 1 1 96.387 91.566 2 0.013687 113764 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 45.347 32.786 83066000 0 83066000 0 0 0 0 0 0 0 0 0 0 0 0 0 40591 3004 36271 338375 268491 268491 0 PTDPDDPLADQNIK Unmodified 1537.726 0.72601657 4690 Q9NW64 RBM22 Pre-mRNA-splicing factor RBM22 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 51.9 52.256 2 1.2569E-22 58112 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 149.38 138.23 52484000 0 0 0 0 0 7353500 0 0 6990900 5800000 5865900 4240500 5427100 0 16806000 40592 4690 36272 338376;338377;338378;338379;338380;338381;338382;338383;338384 268492;268493;268494;268495;268496;268497;268498;268499 268494 8 PTDPIPTSEVN Unmodified 1168.5612 0.56118307 3615 Q92538 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 52.668 52.837 2 0.0217 58788 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 42.19 27.521 64098000 0 0 0 0 4256300 8614700 5305100 4105600 3005900 7382400 7058400 0 4934800 6315000 13120000 40593 3615 36273 338385;338386;338387;338388;338389;338390;338391;338392;338393;338394 268500 268500 1 PTEIYNLGAQSHVK Unmodified 1555.7995 0.79945628 411 O60547 GMDS GDP-mannose 4,6 dehydratase yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 55.535 49.488 3 0.0055152 67598 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.639 33.96 26184000 18289000 0 7895400 0 0 0 0 0 0 0 0 0 0 0 0 40594 411 36274 338395;338396 268501;268502 268501 2 PTENSSAVLLQWHEK Unmodified 1737.8686 0.86859848 4080 Q9BPX5 ARPC5L Actin-related protein 2/3 complex subunit 5-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 66.927 66.565 3 0.0059951 83936 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 40.237 32.829 54433000 0 0 25672000 0 0 0 0 3501200 0 0 7374800 6781600 0 0 11103000 40595 4080 36275 338397;338398;338399;338400;338401 268503;268504;268505;268506 268506 2 PTESASCSTARQTK Unmodified 1522.7046 0.70456962 5105 Q9Y2I8 WDR37 WD repeat-containing protein 37 yes yes 0 0 1 By MS/MS 2 0 1 1 6.8496 3.6066 3 0.023774 5816 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 43.813 31.527 6683500 0 6683500 0 0 0 0 0 0 0 0 0 0 0 0 0 40596 5105 36276 338402 268507 268507 1 PTFNVQVK Unmodified 931.51272 0.51271674 3706 Q93052 LPP Lipoma-preferred partner yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 47.41 47.659 2 0.033162 53476 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 53.878 26.916 10154000 0 0 0 0 0 0 1960000 0 0 0 8194300 0 0 0 0 40597 3706 36277 338403;338404 268508 268508 1 PTFPGIEEK Unmodified 1016.5179 0.51786169 2313 Q13546 RIPK1 Receptor-interacting serine/threonine-protein kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching 10 0 4 1 1 1 1 53.929 53.868 2 0.022047 61971 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 51.749 33.058 20485000 0 0 0 0 5783500 0 7539400 0 0 0 0 0 7161900 0 0 40598 2313 36278 338405;338406;338407;338408 268509;268510 268510 2 PTGDFDSKPSWADQVEEEGEDDK Unmodified 2580.0776 0.077600797 546 O75821 EIF3G Eukaryotic translation initiation factor 3 subunit G yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS 5.2 3.92 3 2 1 1 1 1 1 68.146 64.592 3 9.8783E-19 84163 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.703 97.89 76728000 33661000 27829000 7826500 0 1697900 0 0 0 0 0 0 0 0 0 5713600 40599 546 36279 338409;338410;338411;338412;338413 268511;268512;268513 268512 3 PTGFALGSIEGR Unmodified 1203.6248 0.62478638 1981 P78406 RAE1 mRNA export factor yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 70.138 70.361 2 0.0030771 80952 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 72.006 45.491 23368000 0 0 0 0 0 6189300 0 4143100 0 0 0 4242700 3773900 0 5018800 40600 1981 36280 338414;338415;338416;338417;338418;338419 268514;268515;268516 268514 3 PTGPGGPLIQNVHASK Unmodified 1571.842 0.8419898 4904 Q9UHL9 GTF2IRD1 General transcription factor II-I repeat domain-containing protein 1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS 10 0 4 1 1 1 1 46.006 46.183 3 0.0047457 51970 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 26.059 16.526 16772000 0 0 0 0 0 3196700 0 0 5054800 2062800 0 0 6457600 0 0 40601 4904 36281 338420;338421;338422;338423 268517 268517 1 PTGSVGSTVTTPPPLVR Unmodified 1664.9097 0.90973501 3208 Q86YP4 GATAD2A Transcriptional repressor p66-alpha yes yes 0 0 0 By MS/MS 10 0 1 1 66.167 66.128 2 0.00033845 75987 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 62.088 48.888 2520100 0 0 0 0 0 2520100 0 0 0 0 0 0 0 0 0 40602 3208 36282 338424 268518 268518 1 PTGTFSSGGGSVASQGFGFSSPNK Unmodified 2260.0396 0.039639568 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 71.68 71.858 3 0.0052039 82156 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 24.351 16.063 17862000 0 0 0 0 0 5660200 0 0 3215300 0 0 0 0 3627800 5358800 40603 1364 36283 338425;338426;338427;338428 268519 268519 1 PTHFTVNAK Unmodified 1013.5294 0.52942943 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 6.57 3.96 3 4 1 2 1 1 1 1 22.015 20.65 2 2.9689E-05 29142 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 185.72 163.76 317870000 245210000 0 15158000 0 0 9266200 0 0 0 0 0 17102000 11766000 0 19366000 40604 1124 36284 338429;338430;338431;338432;338433;338434;338435 268520;268521;268522 268521 2 PTIVEEDDPELFK Unmodified 1530.7454 0.74535503 562 O75937 DNAJC8 DnaJ homolog subfamily C member 8 yes yes 0 0 0 By MS/MS 3 0 1 1 78.111 74.692 2 0.022258 89714 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 68.069 52.497 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40605 562 36285 338436 268523 268523 1 PTKPAASDLPVPAEGVR Unmodified 1703.9206 0.92063405 2117 Q05682 CALD1 Caldesmon yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 55.433 55.677 3 0.0025767 62904 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 29.092 24.19 37306000 0 0 0 0 4515600 0 0 0 0 3424100 7301400 9521500 3291700 4170000 5081800 40606 2117 36286 338437;338438;338439;338440;338441;338442;338443 268524;268525;268526;268527;268528 268527 5 PTLDPIITVEGLRK Unmodified 1550.9032 0.90319307 4448 Q9H8E8 CSRP2BP Cysteine-rich protein 2-binding protein yes yes 0 0 1 By MS/MS By matching 10 0 2 1 1 81.015 81.07 3 0.0072518 93833 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 28.11 17.475 7982600 0 0 0 0 0 5720800 0 0 0 2261800 0 0 0 0 0 40607 4448 36287 338444;338445 268529 268529 1 PTLENLTPVVLRPEIR Unmodified 1846.0676 0.06763264 1763 P55211 CASP9 Caspase-9;Caspase-9 subunit p35;Caspase-9 subunit p10 yes yes 0 0 1 By MS/MS 10 0 1 1 84.035 84.214 3 0.0046126 97233 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.753 34.544 7811000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7811000 40608 1763 36288 338446 268530 268530 1 PTLGAVLQQNPSVLEPAAVGGEAASK Unmodified 2503.3282 0.32821702 5193 Q9Y4C1 KDM3A Lysine-specific demethylase 3A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 84.819 84.92 3 1.1676E-15 98463 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 69.845 65.774 91820000 0 0 0 0 6315100 13422000 0 7701000 8205500 16222000 10091000 8587800 0 6624000 14652000 40609 5193 36289 338447;338448;338449;338450;338451;338452;338453;338454;338455 268531;268532;268533;268534;268535;268536;268537;268538;268539;268540;268541 268533 11 PTLLANGGHGVEGSDTTGSPTEFLEEK Unmodified 2742.2984 0.29843303 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 77.405 77.191 3 1.4513E-100 88693 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 130.01 120.03 53472000 0 0 3505800 0 1167700 4484700 0 0 4745900 4730900 0 9110300 3118100 5411900 17197000 40610 1226 36290 338456;338457;338458;338459;338460;338461;338462;338463;338464 268542;268543;268544;268545;268546;268547;268548 268543 7 PTLSEIELFR Unmodified 1203.6499 0.6499385 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 84.082 84.222 2 0.00093431 97156 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 128.36 61.679 94474000 0 0 0 0 0 14699000 4178700 7617400 14913000 10750000 5966600 8577700 3650500 6110000 18010000 40611 528 36291 338465;338466;338467;338468;338469;338470;338471;338472;338473;338474 268549;268550;268551;268552;268553;268554;268555;268556;268557;268558 268552 10 PTNSIVFTK Unmodified 1005.5495 0.54949617 829;93 P06744;CON__Q3ZBD7 GPI Glucose-6-phosphate isomerase no no 0 0 0 By MS/MS 2 0 2 2 62.164 56.27 2 0.021805 72404 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.616 32.187 + 7651000 0 7651000 0 0 0 0 0 0 0 0 0 0 0 0 0 40612 829;93 36292 338475;338476 268559;268560 268559 2 PTPGTSLFTPSEGAASK Unmodified 1646.8152 0.81516593 240 O15014 ZNF609 Zinc finger protein 609 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 62.198 62.272 2 0.013068 71406 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 43.382 37.15 4707200 0 0 0 0 0 2516100 0 0 2191100 0 0 0 0 0 0 40613 240 36293 338477;338478 268561 268561 1 PTPIQTQAIPAIMSGR Oxidation (M) 1695.8978 0.89779012 3041 Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 13 1 1 1 1 1 2 2 1 1 2 70.201 70.371 2;3 0.00023355 80666 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 65.563 59.459 118560000 0 0 0 0 5258800 11483000 6569900 7937900 9432200 17728000 0 22780000 7709100 8043800 21615000 40614 3041 36294 338479;338480;338481;338482;338483;338484;338485;338486;338487;338488;338489;338490;338491 268562;268563;268564;268565;268566;268567;268568;268569;268570 268562 4660 9 PTPIQTQAIPAIMSGR Unmodified 1679.9029 0.9028755 3041 Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 80.796 80.856 2;3 8.9942E-24 93441 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 147.33 119.15 377180000 0 0 0 9874900 19234000 35355000 21132000 33119000 24373000 37060000 35625000 33368000 26883000 32064000 69088000 40615 3041 36294 338492;338493;338494;338495;338496;338497;338498;338499;338500;338501;338502;338503;338504;338505;338506;338507;338508;338509;338510;338511;338512;338513;338514;338515 268571;268572;268573;268574;268575;268576;268577;268578;268579;268580;268581;268582 268571 12 PTPLILDEQGR Unmodified 1237.6667 0.6666512 323 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.85 60.955 2 0.0040978 69465 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 62.303 50.813 147540000 0 0 0 7458000 5877600 20417000 7151600 10737000 13600000 15713000 10396000 13277000 11626000 11363000 19922000 40616 323 36295 338516;338517;338518;338519;338520;338521;338522;338523;338524;338525;338526;338527 268583;268584;268585;268586;268587;268588;268589;268590;268591;268592 268587 9 PTPLILDEQGRTVDATGK Unmodified 1910.0109 0.010905622 323 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 63.127 62.452 3 9.0976E-06 80724 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.422 60.139 200020000 0 109350000 18681000 0 0 8923800 3935500 4212600 11306000 8852700 8108700 8348700 6673300 0 11634000 40617 323 36296 338528;338529;338530;338531;338532;338533;338534;338535;338536;338537;338538 268593;268594;268595;268596;268597;268598;268599;268600 268595 8 PTPVKPNYALK Unmodified 1226.7023 0.70230842 1865 P61964 WDR5 WD repeat-containing protein 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 36.502 36.744 3 0.028245 39215 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.514 23.883 48723000 0 0 0 0 4645500 0 0 6316500 0 6299900 6924800 0 6771200 6618500 11146000 40618 1865 36297 338539;338540;338541;338542;338543;338544;338545 268601 268601 1 PTPVVSTPSK Unmodified 1011.5601 0.56006086 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 27.066 27.283 2 0.034641 28052 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 41.724 26.092 66255000 0 0 0 0 3291400 15007000 0 0 7336800 6288400 9501000 0 5794000 6460400 12575000 40619 965 36298 338546;338547;338548;338549;338550;338551;338552;338553 268602;268603 268603 2 PTQSISQENTNSVPGGPK Unmodified 1839.8963 0.8962698 2736 Q5JSZ5 PRRC2B Protein PRRC2B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.675 35.857 2 1.2053E-33 38438 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 147.26 129.45 69060000 0 0 0 5069300 2477300 5176300 4513200 4099200 4242200 5463600 6700400 8405000 6515100 6689800 9708200 40620 2736 36299 338554;338555;338556;338557;338558;338559;338560;338561;338562;338563;338564;338565 268604;268605;268606;268607;268608;268609;268610;268611;268612;268613;268614;268615 268607 12 PTRETCQGMR Unmodified 1234.5547 0.55467468 1291 P30876 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 0 0 1 By MS/MS 2 0 1 1 8.4039 4.7652 3 0.014301 8343 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.193 36.654 25947000 25947000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40621 1291 36300 338566 268616 268616 1 PTSLASDNSQR Unmodified 1174.5578 0.55782903 558 O75925 PIAS1 E3 SUMO-protein ligase PIAS1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.451 11.571 2 0.00028318 10686 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 93.111 68.188 21453000 0 0 0 1086700 764590 2673000 1508400 1162200 2397400 1331100 0 2602500 1437900 2603200 3886200 40622 558 36301 338567;338568;338569;338570;338571;338572;338573;338574;338575;338576;338577 268617;268618;268619;268620;268621;268622;268623;268624;268625;268626 268617 10 PTSNPQVVNEGGAK Unmodified 1396.6947 0.69465686 4726 Q9NXG2 THUMPD1 THUMP domain-containing protein 1 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 20.61 21.092 2 0.00055685 20861 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.08 49.271 5677400 0 0 0 0 0 0 0 0 0 0 0 0 0 2535600 3141800 40623 4726 36302 338578;338579 268627 268627 1 PTSNPQVVNEGGAKPELASQATEGSK Unmodified 2595.2776 0.27763801 4726 Q9NXG2 THUMPD1 THUMP domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 1 1 6 2 1 1 1 1 1 1 46.224 45.236 3 1.1343E-56 57576 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.16 109.61 109840000 0 64963000 0 0 0 0 0 0 0 4645100 6846100 9492600 4935300 6995000 11962000 40624 4726 36303 338580;338581;338582;338583;338584;338585;338586;338587 268628;268629;268630;268631;268632;268633;268634 268628 7 PTSWAAIAR Unmodified 971.51886 0.51886475 3120 Q7Z739 YTHDF3 YTH domain-containing family protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 52.967 53.235 2 0.0050805 60081 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 84.227 60.255 180240000 0 0 0 0 0 18121000 18253000 0 30426000 0 42063000 0 0 26119000 45259000 40625 3120 36304 338588;338589;338590;338591;338592;338593 268635;268636;268637;268638;268639 268637 4 PTTALLDK Unmodified 857.48583 0.48583328 2207 Q12906 ILF3 Interleukin enhancer-binding factor 3 yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 36.592 32.442 2 0.0041325 42576 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.74 64.538 337570000 0 325520000 12046000 0 0 0 0 0 0 0 0 0 0 0 0 40626 2207 36305 338594;338595 268640 268640 1 PTTQQSPQDEQEK Unmodified 1514.6849 0.68488004 3961 Q96QK1 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.65 3.66 1 3 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 7.911 7.2265 2 0 5632 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 297.2 284.97 243610000 24474000 25423000 1342700 4771000 5674100 7379900 8173900 5867400 6424500 10474000 54745000 25036000 10039000 18855000 34934000 40627 3961 36306 338596;338597;338598;338599;338600;338601;338602;338603;338604;338605;338606;338607;338608;338609;338610;338611;338612 268641;268642;268643;268644;268645;268646;268647;268648;268649;268650;268651;268652;268653;268654;268655 268649 15 PTTVAVDEEGGEDDK Unmodified 1560.6791 0.67912596 4968 Q9UKJ3 GPATCH8 G patch domain-containing protein 8 yes yes 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 27.54 28.003 2 0.0017955 30197 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 65.5 40.284 9483600 0 0 0 0 0 3770000 0 0 0 0 0 2207800 0 0 3505800 40628 4968 36307 338613;338614;338615 268656 268656 0 PTTVNVPTTEVSPTSQK Unmodified 1784.9156 0.91560825 859 P08174 CD55 Complement decay-accelerating factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 52.199 52.34 2 6.72E-37 58984 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 156.69 123.46 87397000 0 0 0 8013300 6433100 9727100 9708200 0 9250800 8172700 8424700 7691300 6809200 6542400 6624800 40629 859 36308 338616;338617;338618;338619;338620;338621;338622;338623;338624;338625;338626 268657;268658;268659;268660;268661;268662;268663;268664;268665;268666;268667;268668 268662 12 PTVASQNQNLPVAK Unmodified 1465.7889 0.7888916 2300 Q13492 PICALM Phosphatidylinositol-binding clathrin assembly protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 40.19 39.959 2 1.61E-61 44468 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 184.24 162.25 342020000 0 16583000 0 15748000 11672000 34782000 21158000 16111000 31987000 37046000 39000000 26310000 23110000 23607000 44908000 40630 2300 36309 338627;338628;338629;338630;338631;338632;338633;338634;338635;338636;338637;338638;338639 268669;268670;268671;268672;268673;268674;268675;268676;268677;268678;268679;268680;268681 268671 13 PTVAVSAAAPAGAAPVPAAAPDAGAPHDR Unmodified 2575.3143 0.31429829 2545 Q15542 TAF5 Transcription initiation factor TFIID subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 65.153 65.449 3 2.0393E-07 74734 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 37.44 29.448 11766000 0 0 0 0 0 0 3734900 0 0 0 0 0 0 3197600 4833900 40631 2545 36310 338640;338641;338642 268682 268682 1 PTVEELYR Unmodified 1005.5131 0.51311067 4278 Q9BZZ5 API5 Apoptosis inhibitor 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.774 47.936 2 4.2514E-48 54012 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 194.27 144.92 1537100000 0 0 0 69948000 72726000 144190000 120600000 113920000 82177000 182840000 157980000 137570000 127390000 109610000 218180000 40632 4278 36311 338643;338644;338645;338646;338647;338648;338649;338650;338651;338652;338653;338654 268683;268684;268685;268686;268687;268688;268689;268690;268691;268692;268693;268694;268695 268691 11 PTVGPGQQDNPLLK Unmodified 1462.778 0.77799256 3061 Q7LBC6 KDM3B Lysine-specific demethylase 3B yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 55.126 48.388 2;3 0.017961 66125 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 25.322 12.695 69100000 44624000 0 24476000 0 0 0 0 0 0 0 0 0 0 0 0 40633 3061 36312 338655;338656;338657 268696;268697 268696 2 PTVQPWIAPPMPR Unmodified 1488.7911 0.7911402 413 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta yes yes 0 0 0 By MS/MS 10 0 1 1 82.858 82.452 2 0.035266 95760 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 33.378 10.737 1888400 0 0 0 1888400 0 0 0 0 0 0 0 0 0 0 0 40634 413 36313 338658 268698 268698 1 PTVTVNFR Unmodified 932.50797 0.50796571 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 2 1 1 1 2 2 2 1 1 51.475 51.751 2 0.00665 57814 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.662 66.134 237800000 0 0 0 0 0 35800000 7844900 11815000 11802000 29431000 37643000 27762000 0 20479000 55221000 40635 2102 36314 338659;338660;338661;338662;338663;338664;338665;338666;338667;338668;338669;338670;338671 268699;268700;268701;268702;268703;268704;268705;268706;268707;268708;268709;268710;268711;268712;268713;268714;268715 268705 17 PTYTNLNR Unmodified 977.49304 0.49304393 1961;3031;4093;1962 P68363;Q9H853;Q71U36;P0DPH8;P0DPH7;Q6PEY2;Q9NY65;Q9BQE3;P68366 TUBA1B;TUBA4B;TUBA1A;TUBA3E;TUBA8;TUBA1C;TUBA4A Tubulin alpha-1B chain;Putative tubulin-like protein alpha-4B;Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-8 chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.724 24.927 2 0.0046334 26577 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 113.1 88.903 468320000 0 0 0 57132000 29345000 29382000 32451000 31131000 14860000 31888000 41554000 38676000 47436000 29441000 85021000 40636 1961;3031;4093;1962 36315 338672;338673;338674;338675;338676;338677;338678;338679;338680;338681;338682;338683 268716;268717;268718;268719;268720;268721;268722;268723;268724;268725;268726;268727 268726 12 PVAHIDQFTADMLGSAELAEEVNLNGSGK Oxidation (M) 3028.4448 0.44477969 1642 P50991 CCT4 T-complex protein 1 subunit delta yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 88.404 84.75 3 1.1604E-146 105355 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 163.14 154.06 29427000 0 22601000 6826300 0 0 0 0 0 0 0 0 0 0 0 0 40637 1642 36316 338684;338685 268728 268728 2646 1 PVAHIDQFTADMLGSAELAEEVNLNGSGK Unmodified 3012.4499 0.44986507 1642 P50991 CCT4 T-complex protein 1 subunit delta yes yes 0 0 0 By MS/MS By MS/MS 3 0 2 1 1 96.225 92.834 3 7.3434E-157 111344 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 173.36 163.9 47033000 21436000 25597000 0 0 0 0 0 0 0 0 0 0 0 0 0 40638 1642 36316 338686;338687 268729;268730 268730 1 PVALINNQFLPYPYYAK Unmodified 2010.0615 0.06148463 62 CON__P02668 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 90.565 90.702 2 0.005763 105109 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 52.79 37.914 + 3780400 0 0 0 0 0 1460000 1190800 1129500 0 0 0 0 0 0 0 40639 62 36317 338688;338689;338690 268731;268732;268733 268732 3 PVANHQYNIEYERK Unmodified 1759.8642 0.86418181 992 P13984 GTF2F2 General transcription factor IIF subunit 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 2 16 2 1 2 2 1 2 2 2 1 1 1 1 31.574 31.035 3;4 3.4156E-06 33732 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 65.895 59.005 230650000 64951000 0 0 0 7306400 34800000 9554600 1847000 19155000 19941000 14454000 16578000 11079000 6992400 23994000 40640 992 36318 338691;338692;338693;338694;338695;338696;338697;338698;338699;338700;338701;338702;338703;338704;338705;338706;338707;338708 268734;268735;268736;268737;268738;268739;268740;268741;268742;268743;268744;268745;268746;268747;268748;268749;268750;268751 268734 15 PVAPQVPSPGGAPGQGPYPYSLSEPAPLTLDTSGK Unmodified 3431.7249 0.72490094 4762 Q9NZB2;Q5T035 FAM120A;C9orf129 Constitutive coactivator of PPAR-gamma-like protein 1;Putative uncharacterized protein C9orf129 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 2 1 1 2 1 2 1 2 2 88.442 88.531 3;4 5.7022E-39 102528 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.461 64.297 66861000 0 0 0 0 4901400 0 0 2591400 1933100 13577000 4879600 12153000 1611700 6228100 18986000 40641 4762 36319 338709;338710;338711;338712;338713;338714;338715;338716;338717;338718;338719;338720;338721;338722 268752;268753;268754;268755;268756;268757;268758;268759;268760;268761;268762;268763 268753 12 PVAPSGTALSTTSSK Unmodified 1402.7304 0.73037367 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 35.221 35.407 2 1.3141E-05 38382 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 101.89 83.663 179970000 0 0 0 13660000 11240000 10157000 18266000 18790000 0 11506000 15696000 23718000 13401000 17854000 25685000 40642 1364 36320 338723;338724;338725;338726;338727;338728;338729;338730;338731;338732;338733 268764;268765;268766;268767;268768;268769;268770;268771;268772;268773;268774;268775 268768 12 PVAPVAPPELVPMK Oxidation (M) 1459.8109 0.81087259 202 O14686 KMT2D Histone-lysine N-methyltransferase 2D yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 75.385 75.44 2 0.0006271 87017 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 62.303 57.759 39896000 0 0 0 2039300 2800400 2935900 3153500 2464800 3243500 0 4171100 5342500 5447100 3076500 5221300 40643 202 36321 338734;338735;338736;338737;338738;338739;338740;338741;338742;338743;338744 268776;268777;268778;268779;268780;268781;268782;268783;268784;268785;268786 268784 271 10 PVAPVAPPELVPMK Unmodified 1443.816 0.81595797 202 O14686 KMT2D Histone-lysine N-methyltransferase 2D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 81.902 81.592 2 0.0003654 94064 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.197 61.844 76197000 0 22358000 0 2080500 2917000 4002400 2231600 4329000 2104500 5061200 3882000 5741800 4369700 6708400 10411000 40644 202 36321 338745;338746;338747;338748;338749;338750;338751;338752;338753;338754;338755;338756;338757 268787;268788;268789;268790;268791;268792;268793;268794;268795;268796;268797;268798;268799;268800 268791 14 PVASCTPQVSHSK Unmodified 1396.6769 0.67689831 5334 yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 67.077 61.564 2 0.011816 78828 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 57.859 17.814 + 40615000 0 40615000 0 0 0 0 0 0 0 0 0 0 0 0 0 40645 5334 36322 338758;338759;338760 268801 268801 1 PVAVMAESAFSFK Unmodified 1382.6904 0.69042311 4040 Q99627 COPS8 COP9 signalosome complex subunit 8 yes yes 0 0 0 By MS/MS 2 0 1 1 88.085 79.955 2 0.010832 104197 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.699 37.236 6067900 6067900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40646 4040 36323 338761 268802 268802 1 PVAVPEEQPVAESGLLAR Unmodified 1860.9945 0.99452728 4222 Q9BXB4 OSBPL11 Oxysterol-binding protein-related protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.863 76.923 2 5.4362E-15 88856 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 109.84 104.95 163580000 0 0 0 6536600 7864100 11332000 10690000 11576000 8245200 17496000 17140000 21809000 10636000 13693000 26561000 40647 4222 36324 338762;338763;338764;338765;338766;338767;338768;338769;338770;338771;338772;338773 268803;268804;268805;268806;268807;268808;268809;268810;268811;268812;268813;268814 268812 12 PVAYMPASIVTSQQPAGHAIHVVQQAPTVTMVR 2 Oxidation (M) 3515.8017 0.80172825 2019 P85037 FOXK1 Forkhead box protein K1 yes yes 0 2 0 By matching By MS/MS 10 0 2 1 1 76.722 76.914 4 8.841E-51 88389 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.035 78.876 18356000 0 0 0 0 0 0 0 0 0 4305100 0 0 0 0 14051000 40648 2019 36325 338774;338775 268815 268815 3270;3271 1 PVCGTTYK Unmodified 924.4375 0.43750288 2407 Q14444 CAPRIN1 Caprin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13.67 13.143 2 0.0029524 15735 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 150.84 123.67 539040000 15739000 256100000 5314400 13170000 10795000 34562000 13737000 7461800 29830000 23711000 31110000 18915000 24641000 25149000 28798000 40649 2407 36326 338776;338777;338778;338779;338780;338781;338782;338783;338784;338785;338786;338787;338788;338789;338790 268816;268817;268818;268819;268820;268821 268820 6 PVCSFDPEGLIFAAGVNSEMVK Oxidation (M) 2382.1236 0.12356889 2984 Q6UXN9 WDR82 WD repeat-containing protein 82 yes yes 0 1 0 By MS/MS 2 0 1 1 97.629 92.856 3 0.0014799 114954 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 41.798 34.438 39650000 0 39650000 0 0 0 0 0 0 0 0 0 0 0 0 0 40650 2984 36327 338791 268822 268822 4599 1 PVDASALGLHDYHDIIK Unmodified 1862.9527 0.95266246 1189 P25440 BRD2 Bromodomain-containing protein 2 yes yes 0 0 0 By matching By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 74.658 74.868 4 0.035318 85826 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 24.41 20.442 28748000 0 0 0 0 0 0 0 0 0 3398500 3014100 3194900 0 4037300 15104000 40651 1189 36328 338792;338793;338794;338795;338796 268823 268823 1 PVDATDPAALIAEALK Unmodified 1593.8614 0.86138784 2526 Q15390 MTFR1 Mitochondrial fission regulator 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 97.166 96.339 2 4.0785E-40 117189 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 167.98 143.69 25987000 0 16852000 0 0 0 0 0 0 0 2822300 2136900 0 0 1092900 3083300 40652 2526 36329 338797;338798;338799;338800;338801 268824;268825;268826 268825 3 PVDENHQQDGDEDSLVSHFYTNPIAK Unmodified 2954.3319 0.33185842 1707 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 76.493 76.645 4 1.337E-10 87925 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.994 53.245 49133000 0 0 0 0 0 6627700 0 0 8077700 5290000 9053500 0 0 0 20084000 40653 1707 36330 338802;338803;338804;338805;338806 268827 268827 1 PVDLQNFGLR Unmodified 1157.6193 0.61930707 3687 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 yes yes 0 0 0 By MS/MS 10 0 1 1 77.569 77.567 2 0.0025237 89452 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 101.33 71.951 24626000 0 0 0 0 0 24626000 0 0 0 0 0 0 0 0 0 40654 3687 36331 338807 268828 268828 1 PVDVGGDEPEEK Unmodified 1269.5725 0.57247604 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 2 1 1 24.769 25.099 2 0.0014569 26578 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 67.726 55.099 40273000 0 0 0 0 0 4269200 2048800 0 2702600 0 5004400 6028500 0 6260100 13959000 40655 1564 36332 338808;338809;338810;338811;338812;338813;338814;338815;338816 268829;268830;268831;268832;268833;268834 268832 6 PVDVGRPVIRPPEQNAPPPGAPDK Unmodified 2502.3343 0.33430545 441 O60885 BRD4 Bromodomain-containing protein 4 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 56.743 56.968 4 2.8719E-05 64765 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 41.446 33.258 43833000 0 0 0 0 0 9951500 5920600 0 8875800 0 0 0 0 6202400 12883000 40656 441 36333 338817;338818;338819;338820;338821 268835;268836;268837 268835 3 PVEAPAANSDQTVTVK Unmodified 1625.8261 0.82606496 1993 P80723 BASP1 Brain acid soluble protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 40.349 40.619 2 1.1775E-10 44203 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.09 73.203 53619000 0 0 0 0 1407800 7264900 0 0 4760200 4333500 7127500 8015700 4350200 6420100 9938900 40657 1993 36334 338822;338823;338824;338825;338826;338827;338828;338829;338830 268838;268839;268840;268841;268842;268843;268844 268840 7 PVEELTEEEK Unmodified 1201.5714 0.57141341 5115 Q9Y2R9 MRPS7 28S ribosomal protein S7, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 31.333 31.567 2 0.010195 34316 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 56.434 42.316 5341900 0 0 0 0 0 0 0 0 2512200 0 0 0 2829700 0 0 40658 5115 36335 338831;338832;338833 268845;268846;268847 268847 3 PVEISADGLPSPNQLK Unmodified 1663.8781 0.87810054 1083 P19174 PLCG1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By MS/MS 7.86 3.4 1 1 5 2 1 1 1 1 1 77.577 76.519 2 2.3853E-23 93908 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 154.28 136.42 91292000 0 77876000 0 0 0 3186000 0 0 1321900 2970300 0 0 0 1881100 4056700 40659 1083 36336 338834;338835;338836;338837;338838;338839;338840 268848;268849 268848 1 PVELPENSLK Unmodified 1124.6077 0.60773933 4645 Q9NUJ3 TCP11L1 T-complex protein 11-like protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 58.995 53.152 2 0.017256 68424 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.568 38.831 29115000 0 29115000 0 0 0 0 0 0 0 0 0 0 0 0 0 40660 4645 36337 338841 268850 268850 1 PVEPAASDLEPFTPTDQSVTPEAIAQGGQSK Unmodified 3166.5306 0.53061781 2427 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9 2.56 1 1 13 2 1 1 1 1 1 1 1 1 1 2 1 1 84.186 83.66 3;4 4.2965E-45 102211 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.29 93.51 239920000 0 123280000 0 2880500 9891700 9004800 0 5357500 11208000 8472900 7064800 8989400 16306000 12098000 25360000 40661 2427 36338 338842;338843;338844;338845;338846;338847;338848;338849;338850;338851;338852;338853;338854;338855;338856 268851;268852;268853;268854;268855;268856;268857;268858;268859;268860;268861;268862;268863;268864;268865;268866;268867 268855 17 PVESPGDPNQLTR Unmodified 1408.6947 0.69465686 3955 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.421 38.601 2 3.5842E-14 42569 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 143.96 136.31 434040000 0 0 0 26226000 19305000 31414000 39206000 29738000 28896000 28435000 43570000 51263000 43734000 37439000 54817000 40662 3955 36339 338857;338858;338859;338860;338861;338862;338863;338864;338865;338866;338867;338868 268868;268869;268870;268871;268872;268873;268874;268875;268876;268877;268878 268872 11 PVESPGDPNQLTRK Unmodified 1536.7896 0.78961988 3955 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 32.417 31.904 3 0.00022841 34995 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 64.244 59.937 253200000 0 17229000 0 13099000 9996200 22402000 22759000 14593000 25253000 23233000 23088000 19002000 21529000 18571000 22446000 40663 3955 36340 338869;338870;338871;338872;338873;338874;338875;338876;338877;338878;338879;338880;338881;338882 268879;268880;268881;268882;268883;268884;268885;268886;268887;268888;268889;268890;268891;268892 268879 9 PVETIGFDSIMK Unmodified 1335.6744 0.67443869 2582 Q15813 TBCE Tubulin-specific chaperone E yes yes 0 0 0 By MS/MS 2 0 1 1 85.652 80.878 2 0.00042967 100578 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.096 57.152 50432000 0 50432000 0 0 0 0 0 0 0 0 0 0 0 0 0 40664 2582 36341 338883 268893 268893 1 PVETTLENNEGGQEQGPSVEGLNVPTK Unmodified 2822.357 0.35701054 4534 Q9NP61 ARFGAP3 ADP-ribosylation factor GTPase-activating protein 3 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 72.454 72.713 3 1.032E-05 83525 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 33.548 30.615 14874000 0 0 0 0 0 0 4016300 0 0 0 0 0 0 0 10858000 40665 4534 36342 338884;338885 268894 268894 1 PVEVSPAVTK Unmodified 1025.5757 0.57571092 3301 Q8N0X7 SPG20 Spartin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 34.39 33.672 2 0.0015719 36966 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 105.1 64.415 974870000 0 150090000 1980900 27929000 43113000 94198000 45185000 50913000 67851000 77120000 87994000 105940000 85652000 66559000 70348000 40666 3301 36343 338886;338887;338888;338889;338890;338891;338892;338893;338894;338895;338896;338897;338898;338899;338900 268895;268896;268897;268898;268899;268900;268901;268902;268903;268904;268905;268906;268907;268908;268909;268910;268911;268912 268907 16 PVFATVDGQEK Unmodified 1189.5979 0.59790293 2182 Q10713 PMPCA Mitochondrial-processing peptidase subunit alpha yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 46.41 41.664 2 0.003977 54428 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 146.79 146.79 96450000 0 94235000 2214200 0 0 0 0 0 0 0 0 0 0 0 0 40667 2182 36344 338901;338902;338903 268913;268914 268913 1 PVFDLGETEEK Unmodified 1262.603 0.60304789 3590 Q8WXG6 MADD MAP kinase-activating death domain protein yes yes 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 61.933 62.176 2 0.0018367 71225 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 82.749 71.387 13029000 0 0 0 0 0 4465900 0 0 3527700 0 0 0 0 0 5035700 40668 3590 36345 338904;338905;338906 268915 268915 1 PVFTDPPVK Unmodified 998.54368 0.54368251 5079 Q9Y237 PIN4 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.83 3.67 3 1 2 1 2 1 1 1 55.829 51.409 2 0.00053503 66796 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.27 91.48 431240000 17912000 362230000 21421000 0 0 0 0 0 0 0 0 0 0 0 29675000 40669 5079 36346 338907;338908;338909;338910;338911;338912 268916;268917;268918;268919;268920;268921;268922 268917 6 PVFVTEITDDLHFYVQDVETGTQLEK Unmodified 3022.4811 0.48114842 3039 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 0 0 0 By MS/MS By matching 2.17 0.687 1 3 2 5 1 101.26 97.467 3;4 8.2554E-47 99200 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 116.94 110.36 132170000 123320000 8847400 0 0 0 0 0 0 0 0 0 0 0 0 0 40670 3039 36347 338913;338914;338915;338916;338917;338918 268923;268924;268925;268926;268927 268923 3 PVGALLGPGAER Unmodified 1135.635 0.63495714 5078 Q9Y232 CDYL Chromodomain Y-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 2 1 1 2 1 1 2 1 1 1 52.823 53.153 2 4.5408E-08 59389 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 131.44 108.7 97905000 0 0 0 0 0 0 24487000 0 0 0 20987000 0 19119000 14140000 19173000 40671 5078 36348 338919;338920;338921;338922;338923;338924;338925;338926;338927;338928;338929;338930;338931;338932 268928;268929;268930;268931;268932;268933;268934;268935;268936;268937;268938;268939;268940;268941;268942;268943;268944;268945;268946 268942 19 PVGFGEEFDEDELMAELEELEQEELDK Oxidation (M) 3184.3806 0.38056726 4390 Q9H444 CHMP4B Charged multivesicular body protein 4b yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 99.944 93.523 3 5.5697E-173 118218 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 188.5 173.43 105470000 71534000 33936000 0 0 0 0 0 0 0 0 0 0 0 0 0 40672 4390 36349 338933;338934 268947;268948 268948 5849 2 PVGFGEEFDEDELMAELEELEQEELDK Unmodified 3168.3857 0.38565264 4390 Q9H444 CHMP4B Charged multivesicular body protein 4b yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 101.06 96.599 3 7.3528E-181 119872 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 196.78 185 365580000 245740000 118260000 1592100 0 0 0 0 0 0 0 0 0 0 0 0 40673 4390 36349 338935;338936;338937;338938;338939 268949;268950;268951;268952;268953;268954;268955;268956;268957 268950 9 PVGGNYGK Unmodified 790.39735 0.39735263 4033 Q99613;B5ME19 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 0 0 0 By matching By MS/MS By MS/MS 2 0 3 1 1 1 9.0336 5.948 2 0.024676 8616 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.34 92.776 187280000 24021000 155510000 7757600 0 0 0 0 0 0 0 0 0 0 0 0 40674 4033 36350 338940;338941;338942 268958 268958 0 PVGLLLSER Unmodified 982.58113 0.58113065 4810 Q9P287 BCCIP BRCA2 and CDKN1A-interacting protein yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 65.699 65.852 2 0.0051747 74383 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.296 24.015 36876000 0 0 0 0 1204800 3585000 1804700 0 2190900 2516000 7636000 4341800 2437700 3297500 7861400 40675 4810 36351 338943;338944;338945;338946;338947;338948;338949;338950;338951;338952 268959;268960;268961;268962;268963;268964;268965;268966 268961 8 PVGLTGLATSSK Unmodified 1129.6343 0.63428844 3775 Q96CB8 INTS12 Integrator complex subunit 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53.812 53.071 2 5.4633E-05 60013 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 90.142 50.075 311340000 24024000 0 2762300 6149800 6167000 21604000 13580000 7352200 22546000 30019000 37960000 32819000 22144000 26073000 58138000 40676 3775 36352 338953;338954;338955;338956;338957;338958;338959;338960;338961;338962;338963;338964;338965;338966 268967;268968;268969;268970;268971;268972;268973;268974;268975;268976;268977;268978;268979;268980;268981 268968 14 PVGPEDMGATAVYELDTEK Oxidation (M) 2036.9249 0.92485231 293 O15541 RNF113A RING finger protein 113A yes yes 0 1 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 7.91 3.42 2 1 8 3 1 1 1 1 1 1 1 1 71.619 70.414 2;3 1.1807E-121 87388 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 212.11 189.19 104970000 0 79574000 0 0 2162700 1653800 2411500 0 0 2573700 4249400 3904300 0 3260100 5178100 40677 293 36353 338967;338968;338969;338970;338971;338972;338973;338974;338975;338976;338977 268982;268983;268984;268985 268982 374 3 PVGPEDMGATAVYELDTEK Unmodified 2020.9299 0.92993769 293 O15541 RNF113A RING finger protein 113A yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 2 1 1 1 2 2 81.321 80.848 2;3 1.4006E-17 93333 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.91 59.422 327320000 0 278530000 0 0 1109000 0 0 3390100 2013000 7167900 5783400 3659000 2271400 6366600 17029000 40678 293 36353 338978;338979;338980;338981;338982;338983;338984;338985;338986;338987;338988;338989;338990;338991 268986;268987;268988;268989;268990;268991;268992 268987 5 PVGPPPERDIASLP Unmodified 1443.7722 0.7721789 4097 Q9BQI0 AIF1L Allograft inflammatory factor 1-like yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 76.584 72.773 2 0.011492 90939 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.184 68.09 39616000 0 37685000 1931000 0 0 0 0 0 0 0 0 0 0 0 0 40679 4097 36354 338992;338993 268993 268993 1 PVGSDPDFQPELSGAGSR Unmodified 1814.8435 0.84350594 324 O43396 TXNL1 Thioredoxin-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 62.428 62.891 2 1.8703E-42 71139 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 147.68 133.87 16646000 0 0 0 0 0 0 0 0 0 0 4911200 0 0 0 11735000 40680 324 36355 338994;338995 268994;268995 268994 2 PVGSLAGIGEVLGK Unmodified 1295.7449 0.74490152 515 O75531 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 83.782 82.584 2 1.0848E-38 103572 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 160.67 117.93 119060000 23746000 31363000 3464600 7576600 3004400 4820600 4049400 4143200 3612700 6517400 6049700 8393700 0 4859900 7455800 40681 515 36356 338996;338997;338998;338999;339000;339001;339002;339003;339004;339005;339006;339007;339008;339009;339010 268996;268997;268998;268999;269000;269001;269002;269003 268997 7 PVGSPHVVTSHQSK Unmodified 1458.7579 0.75792582 2398 Q14244 MAP7 Ensconsin yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.187 13.342 3 0.001544 11840 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 46.206 16.903 114210000 0 0 0 4945700 4415900 11760000 6558900 4763700 8515900 11751000 13561000 14089000 11229000 9250400 13370000 40682 2398 36357 339011;339012;339013;339014;339015;339016;339017;339018;339019;339020;339021;339022 269004;269005;269006;269007 269004 4 PVGSPLFK Unmodified 843.48544 0.48543935 3631 Q92576 PHF3 PHD finger protein 3 yes yes 0 0 0 By MS/MS 2 0 1 1 58.458 52.628 2 0.0365 67846 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.138 30.636 9326300 0 9326300 0 0 0 0 0 0 0 0 0 0 0 0 0 40683 3631 36358 339023 269008 269008 1 PVGVAASLSDIPK Unmodified 1252.7027 0.70270235 2434 Q14687 GSE1 Genetic suppressor element 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.7 3.52 2 1 7 2 1 1 1 1 1 1 1 1 73.872 73.084 2 2.4508E-12 91943 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 165.18 133.42 43891000 0 6589100 8871700 0 0 6735000 4264800 3580800 6569900 0 7280100 0 0 0 0 40684 2434 36359 339024;339025;339026;339027;339028;339029;339030;339031;339032;339033 269009;269010;269011;269012;269013;269014;269015;269016;269017;269018 269011 10 PVHHGVNQLK Unmodified 1127.62 0.61997578 1845 P61313 RPL15 60S ribosomal protein L15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8.5801 8.1682 2 9.2816E-06 6483 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 147.34 97.295 117010000 40487000 4237900 0 2359000 1848700 2372900 2898100 2123000 3853700 6023300 15459000 11138000 8966700 8572500 6673900 40685 1845 36360 339034;339035;339036;339037;339038;339039;339040;339041;339042;339043;339044;339045;339046;339047 269019;269020;269021;269022;269023;269024;269025;269026;269027;269028;269029;269030;269031 269029 12 PVHSSTNYDDAMQFLK Unmodified 1851.8461 0.84614848 5074 Q9UQR1 ZNF148 Zinc finger protein 148 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 73.192 72.378 3 0.00033402 83345 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 62.357 59.006 108480000 29362000 0 0 4112900 0 9063200 0 0 6442300 13755000 7041000 10074000 0 10810000 17824000 40686 5074 36361 339048;339049;339050;339051;339052;339053;339054;339055;339056 269032;269033;269034;269035 269032 3 PVIGSQYPLEK Unmodified 1229.6656 0.66558856 2153 Q08257 CRYZ Quinone oxidoreductase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 6.12 3.89 3 1 4 1 2 1 1 1 1 1 59.386 56.715 2 7.4311E-13 72878 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 158.79 120.7 381400000 11211000 324420000 4697100 0 0 0 0 0 4151500 0 7368600 0 0 4002600 25552000 40687 2153 36362 339057;339058;339059;339060;339061;339062;339063;339064 269036;269037;269038;269039;269040;269041;269042;269043 269037 8 PVINSTPGR Unmodified 939.51378 0.51377937 4010 Q99459 CDC5L Cell division cycle 5-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.733 22.938 2 0.0096665 24403 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 66.073 31.181 135700000 0 0 0 6860000 6400500 12583000 6032000 5539500 7769400 17008000 14026000 19771000 11271000 12355000 16090000 40688 4010 36363 339065;339066;339067;339068;339069;339070;339071;339072;339073;339074;339075;339076 269044;269045;269046;269047;269048;269049;269050 269049 7 PVINSTPGRTPLRDK Unmodified 1649.9213 0.92130275 4010 Q99459 CDC5L Cell division cycle 5-like protein yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.476 33.66 4 0.011827 35590 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 30.905 24.607 111390000 0 0 0 7565500 4733300 8145700 7608100 6125100 10383000 10262000 9608000 11075000 10096000 7904100 17881000 40689 4010 36364 339077;339078;339079;339080;339081;339082;339083;339084;339085;339086;339087;339088 269051;269052;269053 269051 3 PVISPLELR Unmodified 1022.6124 0.61243078 2604 Q16513 PKN2 Serine/threonine-protein kinase N2 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.684 75.747 2 0.002945 86938 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 125.5 110.72 451280000 0 0 0 19820000 26208000 44510000 38655000 31834000 20400000 36965000 54041000 34575000 34969000 35169000 74136000 40690 2604 36365 339089;339090;339091;339092;339093;339094;339095;339096;339097;339098;339099;339100 269054;269055;269056;269057;269058;269059;269060;269061;269062;269063 269055 9 PVISVYPPIR Unmodified 1139.6703 0.67028001 3434 Q8NEZ2 VPS37A Vacuolar protein sorting-associated protein 37A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.693 76.753 2 0.0013167 88487 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 107.66 74.824 40707000 0 0 0 1307500 1459000 3066700 2629300 3625200 2482900 4716000 4422100 3382000 2908300 2634300 8073900 40691 3434 36366 339101;339102;339103;339104;339105;339106;339107;339108;339109;339110;339111;339112 269064;269065;269066;269067;269068;269069;269070;269071;269072;269073;269074;269075 269070 11 PVIVEPLEQLDDEDGLPEK Unmodified 2134.0681 0.06814573 1151 P23246 SFPQ Splicing factor, proline- and glutamine-rich yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 2 1 2 2 1 2 2 2 2 86.356 86.481 2;3 5.527E-12 100226 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 112.51 99.526 80361000 0 0 0 0 2320000 8103400 3729000 5477600 4828100 5053500 8566400 11586000 0 6346100 24351000 40692 1151 36367 339113;339114;339115;339116;339117;339118;339119;339120;339121;339122;339123;339124;339125;339126;339127;339128;339129 269076;269077;269078;269079;269080;269081;269082;269083;269084;269085;269086;269087;269088;269089;269090 269077 15 PVLFFER Unmodified 906.49634 0.49633839 1223 P27707 DCK Deoxycytidine kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 77.175 77.327 2 0.028147 88602 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.847 47.508 125050000 0 0 0 0 0 16077000 5789700 5324200 7440700 10472000 12079000 15902000 9586900 11130000 31251000 40693 1223 36368 339130;339131;339132;339133;339134;339135;339136;339137;339138;339139 269091;269092;269093 269091 3 PVLGAANPAR Unmodified 964.54541 0.54541385 2351 Q13887 KLF5 Krueppel-like factor 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.053 31.242 2 0.0038168 34281 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 75.109 48.507 136250000 0 0 0 6544000 5896500 13120000 6858500 10443000 11007000 11915000 15655000 12071000 12551000 10813000 19380000 40694 2351 36369 339140;339141;339142;339143;339144;339145;339146;339147;339148;339149;339150;339151 269094;269095;269096;269097;269098;269099;269100;269101;269102;269103;269104;269105;269106 269094 10 PVLGALATPGEK Unmodified 1151.655 0.65502388 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 7.44 3.62 2 1 6 1 2 1 1 1 1 1 1 62.085 60.196 2 3.296E-05 80837 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 102.06 71.895 91893000 19524000 51242000 0 0 0 0 3354800 2705200 0 2755100 3302200 4245500 0 0 4763900 40695 645 36370 339152;339153;339154;339155;339156;339157;339158;339159;339160 269107;269108;269109;269110;269111;269112 269111 6 PVLGKDEDFK Unmodified 1146.5921 0.59208927 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 34.407 34.26 2;3 3.4055E-05 44005 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 135.43 107.32 246020000 0 0 12164000 12804000 12129000 24770000 15560000 20080000 10945000 27535000 0 28767000 20923000 25064000 35282000 40696 848 36371 339161;339162;339163;339164;339165;339166;339167;339168;339169;339170;339171;339172 269113;269114;269115;269116;269117;269118;269119;269120 269118 8 PVLHMVSSEQHSADLNR Unmodified 1918.9319 0.93194379 2113 Q05209 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 2 1 1 1 1 1 43.083 43.399 3;4 0.0093708 48601 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 31.7 22.908 77669000 0 0 0 0 0 13057000 6424700 0 7733100 0 4142600 13977000 0 7223800 25111000 40697 2113 36372 339173;339174;339175;339176;339177;339178;339179;339180 269121;269122 269121 2 PVLISLGK Unmodified 825.53239 0.53238955 4312 Q9H008 LHPP Phospholysine phosphohistidine inorganic pyrophosphate phosphatase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 6 4 2 2 1 1 1 1 68.424 65.441 2 0.025333 75320 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 58.782 12.119 66016000 44653000 0 7053900 4438400 0 0 0 0 0 0 0 0 0 0 9870400 40698 4312 36373 339181;339182;339183;339184 269123;269124 269124 2 PVLMALAEGPGAEGPR Oxidation (M) 1579.8028 0.8028271 2262 Q13263 TRIM28 Transcription intermediary factor 1-beta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 3 2 1 1 1 2 67.6 67.811 2;3 2.2293E-19 77954 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 105.46 85.254 30371000 0 0 0 0 0 9824000 4877300 0 0 5472400 3588400 0 0 0 6609000 40699 2262 36374 339185;339186;339187;339188;339189;339190;339191;339192;339193;339194 269125;269126;269127;269128;269129;269130;269131;269132;269133 269125 3682 9 PVLMALAEGPGAEGPR Unmodified 1563.8079 0.80791248 2262 Q13263 TRIM28 Transcription intermediary factor 1-beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 2 1 1 78.235 78.392 2;3 0.00016514 90197 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.261 62.059 43146000 0 0 0 0 0 7604200 1410900 0 2782000 0 14989000 0 0 4058400 12302000 40700 2262 36374 339195;339196;339197;339198;339199;339200;339201 269134;269135;269136;269137;269138 269135 4 PVLMMNK Oxidation (M) 847.42958 0.42958073 980 P13639 EEF2 Elongation factor 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.89 3.52 5 14 2 1 2 1 1 2 1 2 1 1 2 1 1 1 26.358 25.651 2 1.7598E-06 42315 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 154.91 98.889 887930000 316360000 346790000 113510000 0 2886200 3661300 4541600 4420300 8590600 4772700 9133000 20613000 4380700 16546000 31715000 40701 980 36375 339202;339203;339204;339205;339206;339207;339208;339209;339210;339211;339212;339213;339214;339215;339216;339217;339218;339219;339220 269139;269140;269141;269142;269143;269144;269145;269146;269147;269148 269145 1314 10 PVLMMNK Unmodified 831.43467 0.43466611 980 P13639 EEF2 Elongation factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 45.483 39.881 2 1.3657E-05 50215 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 186.74 136.62 1886800000 1271800000 477890000 137100000 0 0 0 0 0 0 0 0 0 0 0 0 40702 980 36375 339221;339222;339223 269149;269150;269151;269152;269153;269154;269155 269155 7 PVLMMNK 2 Oxidation (M) 863.4245 0.42449536 980 P13639 EEF2 Elongation factor 2 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS 2.29 0.452 5 2 3 2 2 15.944 12.502 2 0.026737 17869 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 99.511 60.292 822800000 225180000 494260000 103360000 0 0 0 0 0 0 0 0 0 0 0 0 40703 980 36375 339224;339225;339226;339227;339228;339229;339230 269156;269157;269158;269159;269160;269161 269159 1314 2 PVLPALTINPTIAEGPSPTSEGASEANLVDLQK Unmodified 3328.7402 0.74021666 1373 P36507 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 yes yes 0 0 0 By MS/MS 10 0 1 1 93.843 93.962 3 0.003371 109189 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 19.903 14.691 1949000 0 0 0 0 0 0 0 0 0 1949000 0 0 0 0 0 40704 1373 36376 339231 269162 269162 1 PVLPLYR Unmodified 856.51707 0.51707383 2993 Q6XZF7 DNMBP Dynamin-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.114 65.202 2 0.023439 74733 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 85.061 74.635 53173000 0 0 0 2672500 2820700 3074000 3980500 3678300 3557100 4190800 5629800 6010500 7384100 2647800 7527200 40705 2993 36377 339232;339233;339234;339235;339236;339237;339238;339239;339240;339241;339242;339243 269163;269164 269164 2 PVLTAVPGITR Unmodified 1122.6761 0.67609367 464 O75152 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.472 71.544 2 0.00021 81609 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 121.73 88.892 233150000 0 0 0 9348800 12201000 20900000 15204000 16366000 14932000 20270000 23814000 31325000 20069000 15769000 32953000 40706 464 36378 339244;339245;339246;339247;339248;339249;339250;339251;339252;339253;339254;339255 269165;269166;269167;269168;269169;269170;269171;269172;269173;269174;269175;269176 269168 10 PVLTGQR Unmodified 769.44464 0.44463717 5280 Q9Y6E2 BZW2 Basic leucine zipper and W2 domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.434 15.604 2 0.023118 15210 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 102.98 54.738 1057700000 0 0 0 54210000 55666000 85864000 75492000 65104000 60799000 102890000 126830000 98621000 119970000 109980000 102270000 40707 5280 36379 339256;339257;339258;339259;339260;339261;339262;339263;339264;339265;339266;339267 269177;269178;269179;269180 269179 1 PVLTLTEQPK Unmodified 1124.6441 0.64412484 4723 Q9NXC5 MIOS WD repeat-containing protein mio yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 53.887 54.019 2 0.011018 60886 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 54.982 38.206 18755000 0 0 0 0 0 5964800 0 5594800 0 7195600 0 0 0 0 0 40708 4723 36380 339268;339269;339270 269181;269182 269182 2 PVLTQESATYIAEEYSR Unmodified 1955.9476 0.94763666 1183 P25205 MCM3 DNA replication licensing factor MCM3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 2 2 2 2 2 2 2 79.056 79.143 2;3 6.206E-61 91188 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 208.27 185.35 95441000 0 0 0 0 4173000 12947000 0 6072500 0 14824000 10985000 13652000 0 0 32789000 40709 1183 36381 339271;339272;339273;339274;339275;339276;339277;339278;339279;339280;339281;339282;339283;339284 269183;269184;269185;269186;269187;269188;269189;269190;269191 269186 7 PVLTSVMVPK Oxidation (M) 1085.6155 0.61546725 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 60.325 60.438 2 0.014703 68555 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 46.158 29.955 73015000 0 0 0 3712900 3584100 0 5633900 5696700 10142000 8037500 5527500 9734200 7032000 6835600 7077700 40710 4139 36382 339285;339286;339287;339288;339289;339290;339291;339292;339293;339294;339295 269192;269193;269194;269195;269196;269197;269198 269197 5631 7 PVLVKPEGVLVEK Unmodified 1405.8545 0.85445197 36 A8K2U0 A2ML1 Alpha-2-macroglobulin-like protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.657 63.749 3 7.4728E-09 72819 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 110.38 106.13 213640000 0 0 0 77308000 7547500 14490000 9399600 16443000 6286300 24866000 13016000 19097000 10624000 7753400 6811500 40711 36 36383 339296;339297;339298;339299;339300;339301;339302;339303;339304;339305;339306;339307 269199;269200;269201;269202;269203;269204;269205;269206;269207;269208 269204 10 PVNAIIEHVR Unmodified 1146.6509 0.65094155 3039 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 1 2 1 1 1 1 2 2 1 2 2 47.47 47.716 2;3 6.2228E-05 52384 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 132.88 117.25 294590000 0 0 0 7778000 7840900 49084000 13290000 11264000 10199000 3928000 33195000 39463000 16976000 24452000 77117000 40712 3039 36384 339308;339309;339310;339311;339312;339313;339314;339315;339316;339317;339318;339319;339320;339321;339322;339323;339324 269209;269210;269211;269212;269213;269214;269215;269216;269217;269218;269219 269210 10 PVNDYSK Unmodified 821.39193 0.3919329 4046 Q99698 LYST Lysosomal-trafficking regulator yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 72.725 72.743 2 0.025324 83364 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 80.999 52.47 112160000 0 0 0 4438100 8885000 17304000 5872000 7941200 12722000 14368000 15499000 25133000 0 0 0 40713 4046 36385 339325;339326;339327;339328;339329;339330;339331;339332;339333 269220;269221;269222;269223 269222 4 PVNLGLWDTAGQEDYDR Unmodified 1947.8963 0.8962698 1936 P63000;P60763;P15153 RAC1;RAC3;RAC2 Ras-related C3 botulinum toxin substrate 1;Ras-related C3 botulinum toxin substrate 3;Ras-related C3 botulinum toxin substrate 2 yes no 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 81.743 81.899 2 4.4451E-08 94691 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 90.926 77.725 9944000 0 0 0 0 0 0 0 0 0 0 0 0 0 2604400 7339600 40714 1936 36386 339334;339335;339336 269224;269225 269224 2 PVNPVFCMPEEVLQR Unmodified 1813.8855 0.88551087 1719 P53611 RABGGTB Geranylgeranyl transferase type-2 subunit beta yes yes 0 0 0 By matching By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 88.735 88.882 3 0.03255 103146 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 28.089 23.847 12457000 0 0 0 0 0 0 0 0 0 1170100 1676900 1114000 0 0 8495500 40715 1719 36387 339337;339338;339339;339340 269226 269226 1 PVNPVFCMPEEVLQR Oxidation (M) 1829.8804 0.8804255 1719 P53611 RABGGTB Geranylgeranyl transferase type-2 subunit beta yes yes 0 1 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 2 1 79.483 79.559 2;3 0.00035345 91176 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 58.071 51.013 25216000 0 0 0 0 2215100 0 0 2192500 2595300 3942900 0 7126300 0 7144100 0 40716 1719 36387 339341;339342;339343;339344;339345;339346;339347 269227;269228 269227 2789 2 PVNSKPDSAYR Unmodified 1232.6149 0.61494998 670 O95573 ACSL3 Long-chain-fatty-acid--CoA ligase 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 11.198 11.338 3 0.00037507 10152 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 79.82 71.421 139490000 0 0 0 10256000 6426700 15551000 6130400 8254900 10814000 13594000 9416200 17043000 14728000 13600000 13675000 40717 670 36388 339348;339349;339350;339351;339352;339353;339354;339355;339356;339357;339358;339359 269229;269230;269231;269232;269233;269234;269235;269236;269237;269238;269239;269240;269241 269240 9 PVNTSLSPSPALALPNLANVDLAK Unmodified 2401.3217 0.32167508 2810 Q5VT52 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 93.794 93.896 3 1.2854E-77 109016 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 137.38 134.34 84970000 0 0 0 0 2480900 2245500 0 5632000 1957800 20912000 9730200 6138500 1020100 4329000 30523000 40718 2810 36389 339360;339361;339362;339363;339364;339365;339366;339367;339368;339369 269242;269243;269244;269245;269246;269247;269248 269245 7 PVPAAPVPSPVAPAPVPSR Unmodified 1805.02 0.019954166 4956 Q9UK76 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 2 2 1 2 2 75.218 75.366 2;3 9.2399E-21 87001 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 131.32 130.63 357340000 0 0 0 0 2604800 0 2251000 0 0 2306000 57380000 69146000 1335700 53233000 169080000 40719 4956 36390 339370;339371;339372;339373;339374;339375;339376;339377;339378;339379;339380;339381 269249;269250;269251;269252;269253;269254;269255;269256 269252 4 PVPAAPVPSPVAPAPVPSRR Unmodified 1961.1211 0.12106519 4956 Q9UK76 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 67.785 68.14 3 0.003227 78142 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 30.587 28.895 76281000 0 0 0 0 0 0 0 0 0 0 13195000 15501000 0 10422000 37163000 40720 4956 36391 339382;339383;339384;339385 269257;269258;269259;269260 269259 4 PVPAMTWFHGQK Unmodified 1397.6914 0.69142616 3603 Q8WZ42 TTN Titin yes yes 0 0 0 By MS/MS 2 0 1 1 67.392 61.476 2 0.042203 78674 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 46.129 2.6866 20855000 0 20855000 0 0 0 0 0 0 0 0 0 0 0 0 0 40721 3603 36392 339386 269261 269261 1 PVPAVPVQK Unmodified 933.56475 0.56475231 4199 Q9BW19 KIFC1 Kinesin-like protein KIFC1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 40.7 40.465 2 0.0052608 45088 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 78.616 61.345 192310000 0 54652000 0 7604400 7287400 13939000 9018900 6995300 10146000 15492000 16293000 11814000 10962000 11088000 17020000 40722 4199 36393 339387;339388;339389;339390;339391;339392;339393;339394;339395;339396;339397;339398;339399 269262;269263;269264;269265;269266;269267;269268;269269;269270;269271;269272;269273;269274 269271 13 PVPDMTQVSGPNAQLVK Oxidation (M) 1795.9138 0.91383411 4814 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 0 1 0 By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 55.755 55.913 2 0.002072 63656 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 44.299 38.454 26765000 0 0 0 0 3240600 2377200 0 1849900 3292500 2539800 4896600 5136800 3431200 0 0 40723 4814 36394 339400;339401;339402;339403;339404;339405;339406;339407 269275 269275 6179 1 PVPDMTQVSGPNAQLVK Unmodified 1779.9189 0.91891949 4814 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 71.384 70.9 2;3 0.0010001 81058 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.57 53.134 60083000 0 25092000 0 1984700 0 3319100 3358100 4635400 3444000 4453100 0 0 0 5290600 8506500 40724 4814 36394 339408;339409;339410;339411;339412;339413;339414;339415;339416 269276;269277;269278;269279;269280 269278 5 PVPESGDGERVPEQK Unmodified 1622.79 0.79001381 1488 P45974 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.47 3.59 3 2 10 1 3 1 1 1 1 1 1 1 1 1 1 1 25.474 24.219 3 4.2112E-23 29463 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 103.21 96.011 989370000 42917000 651190000 13448000 13536000 0 46795000 11625000 0 19163000 16180000 26643000 25147000 19198000 37462000 66066000 40725 1488 36395 339417;339418;339419;339420;339421;339422;339423;339424;339425;339426;339427;339428;339429;339430;339431 269281;269282;269283;269284;269285;269286;269287;269288;269289;269290;269291;269292;269293;269294;269295;269296;269297;269298;269299 269290 19 PVPLPRPGQCEIPEPR Unmodified 1840.9618 0.96178736 2781 Q5T749 KPRP Keratinocyte proline-rich protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 67.104 67.107 3 0.0027624 76917 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 43.791 33.324 120570000 0 0 0 56745000 3983400 6987600 10363000 4821500 6688000 6919500 7544900 0 12514000 4002800 0 40726 2781 36396 339432;339433;339434;339435;339436;339437;339438;339439;339440;339441 269300;269301;269302;269303;269304;269305;269306;269307;269308;269309 269300 9 PVPQVDEAETR Unmodified 1239.6095 0.60953025 4582 Q9NQZ2 UTP3 Something about silencing protein 10 yes yes 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 34.453 34.348 2 0.02216 37934 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 72.643 65.075 18635000 0 0 0 0 5838000 7176800 0 0 5619800 0 0 0 0 0 0 40727 4582 36397 339442;339443;339444 269310 269310 0 PVQDLIK Unmodified 811.48035 0.48035398 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 43.67 43.061 2 0.014329 53398 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 127.84 71.334 1035700000 0 91195000 0 49004000 0 91848000 74918000 67428000 57358000 81331000 109640000 83100000 94840000 83570000 151430000 40728 894 36398 339445;339446;339447;339448;339449;339450;339451;339452;339453;339454;339455;339456;339457 269311;269312;269313;269314;269315;269316;269317;269318;269319;269320;269321;269322;269323;269324;269325 269319 14 PVQDLNIVLK Unmodified 1137.6758 0.67575932 3292 Q8IZ73 RPUSD2 RNA pseudouridylate synthase domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.25 3.34 2 1 1 2 1 1 76.931 74.305 2 0.0017974 93039 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.6 84.155 94413000 0 84507000 2687500 0 0 0 0 0 0 0 0 0 0 0 7218700 40729 3292 36399 339458;339459;339460;339461 269326;269327;269328 269326 3 PVQDRPTLFLEVIQR Unmodified 1810.0101 0.010117761 1323 P32754 HPD 4-hydroxyphenylpyruvate dioxygenase yes yes 0 0 1 By MS/MS 10 0 1 1 84.939 85.118 3 5.5571E-07 98308 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.16 79.104 5754500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5754500 40730 1323 36400 339462 269329 269329 1 PVQFEGSLGK Unmodified 1060.5553 0.55530983 3133 Q86TB9 PATL1 Protein PAT1 homolog 1 yes yes 0 0 0 By MS/MS 10 0 1 1 47.072 47.226 2 0.0098571 53047 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 78.264 56.133 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40731 3133 36401 339463 269330 269330 1 PVQMMFK Unmodified 879.43467 0.43466611 1344 P35237 SERPINB6 Serpin B6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 54.429 53.254 2 0.02335 59125 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 89.903 61.037 1767400000 1050000000 473900000 0 3035300 2578500 0 4377200 4400700 0 9993600 32380000 24829000 0 28516000 133380000 40732 1344 36402 339464;339465;339466;339467;339468;339469;339470;339471;339472;339473;339474 269331;269332;269333;269334;269335;269336;269337;269338;269339;269340;269341;269342;269343 269342 13 PVQMMFK Oxidation (M) 895.42958 0.42958073 1344 P35237 SERPINB6 Serpin B6 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 6.64 3.88 5 1 8 2 3 1 1 1 1 1 1 1 1 1 41.613 39.306 1;2 0.018905 46887 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.035 31.74 644110000 307550000 220760000 62719000 958380 3854600 3928200 3789500 0 0 7188600 13092000 11101000 0 9167300 0 40733 1344 36402 339475;339476;339477;339478;339479;339480;339481;339482;339483;339484;339485;339486;339487;339488 269344;269345;269346;269347;269348;269349;269350;269351 269345 2042;2043 7 PVQMMFK 2 Oxidation (M) 911.4245 0.42449536 1344 P35237 SERPINB6 Serpin B6 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS 2.18 0.386 9 2 3 5 3 21.824 17.98 2 0.03039 23744 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.957 80.736 729440000 219530000 407990000 101910000 0 0 0 0 0 0 0 0 0 0 0 0 40734 1344 36402 339489;339490;339491;339492;339493;339494;339495;339496;339497;339498;339499 269352;269353;269354;269355;269356;269357;269358;269359;269360;269361;269362 269353 2042;2043 3 PVQNPLQTTSQSSK Unmodified 1513.7736 0.77363546 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.079 38.259 2 2.704E-100 43003 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 199.7 189.9 340340000 0 0 0 19915000 15542000 20849000 21064000 27407000 20898000 32611000 33724000 45000000 30029000 29701000 43596000 40735 5216 36403 339500;339501;339502;339503;339504;339505;339506;339507;339508;339509;339510;339511 269363;269364;269365;269366;269367;269368;269369;269370;269371;269372;269373;269374 269373 12 PVQQPSAFGSMK Unmodified 1275.6282 0.6281572 1605 P49841 GSK3B Glycogen synthase kinase-3 beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 45.979 46.377 2 1.618E-08 51063 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 148.32 132.12 47003000 0 0 0 0 0 7463600 0 0 4954500 0 7449400 7040600 0 7150300 12944000 40736 1605 36404 339512;339513;339514;339515;339516;339517;339518 269375;269376;269377;269378;269379;269380;269381 269377 7 PVQTFTEEK Unmodified 1077.5342 0.53424004 4746 Q9NYL9 TMOD3 Tropomodulin-3 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 27.823 27.362 2 0.0015888 34331 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 135 111.96 330150000 0 166400000 0 7443200 8036500 24990000 8218500 7166000 17340000 13839000 16610000 21989000 12318000 7071100 18736000 40737 4746 36405 339519;339520;339521;339522;339523;339524;339525;339526;339527;339528;339529;339530;339531;339532 269382;269383;269384;269385;269386;269387;269388;269389;269390;269391;269392;269393;269394 269385 13 PVQTSAVTGQASTGPVTQIIQTK Unmodified 2311.2383 0.23833938 1663 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.42 2 1 1 24 2 2 2 2 2 2 2 2 2 2 2 2 2 74.928 74.673 2;3 2.1652E-103 86427 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 171.29 167.31 1072300000 0 49676000 0 33570000 48181000 117940000 55564000 81882000 80463000 91342000 89698000 116310000 75536000 84379000 147790000 40738 1663 36406 339533;339534;339535;339536;339537;339538;339539;339540;339541;339542;339543;339544;339545;339546;339547;339548;339549;339550;339551;339552;339553;339554;339555;339556;339557;339558 269395;269396;269397;269398;269399;269400;269401;269402;269403;269404;269405;269406;269407;269408;269409;269410;269411;269412;269413;269414;269415 269410 21 PVRLSQQLDK Unmodified 1182.6721 0.67207093 992 P13984 GTF2F2 General transcription factor IIF subunit 2 yes yes 0 0 1 By MS/MS 2 0 1 1 38.849 32.287 2 7.1768E-05 44996 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 128.35 71.914 32932000 32932000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40739 992 36407 339559 269416 269416 1 PVRPGGGDTSPR Unmodified 1194.6105 0.6105333 2736 Q5JSZ5 PRRC2B Protein PRRC2B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 9.1463 9.2598 3 0.0012435 7581 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 51.135 30.614 42872000 0 0 0 4450000 3808500 3418700 3274000 2070000 2648200 3240400 0 8556900 3950800 3238900 4215300 40740 2736 36408 339560;339561;339562;339563;339564;339565;339566;339567;339568;339569;339570 269417;269418;269419;269420;269421;269422;269423;269424 269423 7 PVSAEDHNVYIYYPTSAGGGSQR Unmodified 2467.1404 0.14041625 317 O43314 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 yes yes 0 0 0 By MS/MS 10 0 1 1 63.877 64.057 3 0.042588 73340 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 33.425 30.269 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40741 317 36409 339571 269425 269425 1 PVSATGAEDK Unmodified 973.47164 0.47163978 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.67 2.98 1 5 1 1 2 1 1 7.4756 7.6053 2 0.002198 5270 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 85.676 50.783 10193000 0 0 0 0 0 4131000 0 0 4755800 0 0 1306000 0 0 0 40742 848 36410 339572;339573;339574;339575;339576;339577 269426;269427;269428;269429 269429 4 PVSDMELETPTDK Unmodified 1460.6705 0.67047553 1224 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 0 0 0 By MS/MS 2 0 1 1 55.564 49.749 2 4.7481E-08 64338 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.03 99.101 30069000 0 30069000 0 0 0 0 0 0 0 0 0 0 0 0 0 40743 1224 36411 339578 269430;269431 269430 2 PVSEYIIK Unmodified 947.53278 0.53278348 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 7 3.69 1 1 3 2 1 1 1 54.086 51.889 2 0.029218 58059 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 56.27 30.443 64814000 0 40319000 0 0 3806700 11979000 0 0 8709900 0 0 0 0 0 0 40744 3443 36412 339579;339580;339581;339582;339583 269432;269433 269433 2 PVSIATNR Unmodified 856.47667 0.47666558 1600 P49790 NUP153 Nuclear pore complex protein Nup153 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 1 1 1 1 1 2 1 2 2 1 20.663 20.904 2 0.0066147 22117 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 99.375 48.338 468840000 0 0 0 24895000 21844000 32383000 29297000 31893000 31027000 46696000 67158000 60576000 32985000 45165000 44922000 40745 1600 36413 339584;339585;339586;339587;339588;339589;339590;339591;339592;339593;339594;339595;339596;339597;339598 269434;269435;269436;269437;269438;269439;269440;269441;269442;269443;269444 269434 10 PVSMVPNIPGIPGPPVNSSGSISPSGHPIPSEAK Oxidation (M) 3318.6918 0.69182667 1055 P17544 ATF7 Cyclic AMP-dependent transcription factor ATF-7 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 82.676 82.791 3 1.207E-14 96075 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 44.317 40.272 15254000 0 0 0 0 0 2230700 0 0 0 5354400 3057500 4611600 0 0 0 40746 1055 36414 339599;339600;339601;339602 269445;269446;269447;269448 269448 1477 4 PVSPLLLASGMAR Oxidation (M) 1326.733 0.73295662 967 P12277;P06732 CKB;CKM Creatine kinase B-type;Creatine kinase M-type;Creatine kinase M-type, N-terminally processed yes no 0 1 0 By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 2 2 2 75.849 75.982 2 3.2643E-05 87129 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.441 63.586 101010000 0 0 0 0 819410 0 0 0 0 0 0 17969000 0 12173000 70052000 40747 967 36415 339603;339604;339605;339606;339607;339608;339609 269449;269450;269451;269452 269449 1278 3 PVSPLLLASGMAR Unmodified 1310.738 0.738042 967 P12277;P06732 CKB;CKM Creatine kinase B-type;Creatine kinase M-type;Creatine kinase M-type, N-terminally processed yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 85.015 85.17 2 1.0256E-06 98790 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 93.258 64.531 101260000 0 0 0 0 0 0 0 0 0 0 12599000 9845400 0 10279000 68538000 40748 967 36415 339610;339611;339612;339613 269453;269454;269455;269456;269457;269458;269459 269459 7 PVSPLLTAAGMAR Unmodified 1282.7067 0.70674187 969 P12532 CKMT1A Creatine kinase U-type, mitochondrial yes yes 0 0 0 By MS/MS 10 0 1 1 78.613 78.161 2 0.0031132 90741 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 55.353 20.129 4676700 0 0 0 4676700 0 0 0 0 0 0 0 0 0 0 0 40749 969 36416 339614 269460 269460 1 PVSQKPPPPSEK Unmodified 1289.698 0.69795133 694 O95817 BAG3 BAG family molecular chaperone regulator 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 11.069 10.285 3 7.4161E-05 15089 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 115.33 88.54 452310000 98367000 205430000 5036500 6440400 6496100 12657000 8808700 6043800 9057500 12343000 0 23912000 12293000 16799000 28624000 40750 694 36417 339615;339616;339617;339618;339619;339620;339621;339622;339623;339624;339625;339626;339627;339628;339629 269461;269462;269463;269464;269465;269466;269467;269468;269469 269466 2 PVSSAASVYAGAGGSGSR Unmodified 1579.759 0.75904803 814 P05783 KRT18 Keratin, type I cytoskeletal 18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 1 2 3 2 2 2 2 2 2 2 2 2 37.646 37.855 2;3 4.619E-72 40709 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 176.25 160.92 382300000 0 0 0 8264600 17638000 31517000 22193000 23142000 16837000 33960000 34632000 58334000 46794000 23992000 65000000 40751 814 36418 339630;339631;339632;339633;339634;339635;339636;339637;339638;339639;339640;339641;339642;339643;339644;339645;339646;339647;339648;339649;339650;339651;339652;339653 269470;269471;269472;269473;269474;269475;269476;269477;269478;269479;269480;269481;269482;269483;269484;269485;269486;269487;269488;269489;269490;269491;269492;269493 269479 23 PVSSNNSLSAFTPALSNQNVEEEK Unmodified 2561.2245 0.22453981 395 O60318 MCM3AP Germinal-center associated nuclear protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 77.68 77.766 3 2.5142E-06 89032 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 46.273 42.61 55685000 0 0 0 0 6010200 0 0 13278000 5409400 0 0 0 8882600 10709000 11396000 40752 395 36419 339654;339655;339656;339657;339658;339659;339660 269494;269495;269496;269497 269497 4 PVSSPFPTK Unmodified 958.51238 0.51238239 4978 Q9UKX7 NUP50 Nuclear pore complex protein Nup50 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 2 1 1 1 1 47.022 41.522 2 4.8293E-05 57137 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 153.08 114.26 55201000 35740000 11575000 7886100 0 0 0 0 0 0 0 0 0 0 0 0 40753 4978 36420 339661;339662;339663 269498;269499 269499 1 PVSSPFPTKPLEGQAEGDSGECK Unmodified 2416.1217 0.12165464 4978 Q9UKX7 NUP50 Nuclear pore complex protein Nup50 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 60.636 60.136 3 8.5552E-51 77626 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.18 114.35 83742000 0 26456000 0 0 4093700 0 7375400 8556900 0 6964000 0 7853900 5736900 5642400 11064000 40754 4978 36421 339664;339665;339666;339667;339668;339669;339670;339671;339672 269500;269501;269502;269503;269504;269505;269506;269507;269508;269509 269502 9 PVSTTAVEGAE Unmodified 1059.5084 0.50841922 2602 Q16401 PSMD5 26S proteasome non-ATPase regulatory subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.31 2.4 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 38.24 38.815 2 8.2709E-17 85583 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 173.68 163.69 384190000 39440000 0 0 16396000 18357000 28237000 23841000 22949000 14044000 35250000 39617000 32737000 26059000 24552000 62709000 40755 2602 36422 339673;339674;339675;339676;339677;339678;339679;339680;339681;339682;339683;339684;339685 269510;269511;269512;269513;269514;269515;269516;269517;269518;269519;269520;269521;269522 269515 11 PVSVACTQLAFSGPK Unmodified 1560.797 0.79701344 3588 Q8WXE0 CASKIN2 Caskin-2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 71.991 72.193 2 1.0928E-06 83077 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 84.718 75.529 27575000 0 0 0 0 0 4084200 0 2373600 3221200 4373400 3187100 5519600 0 0 4815500 40756 3588 36423 339686;339687;339688;339689;339690;339691;339692 269523;269524;269525;269526;269527 269527 5 PVSVAGSPLSPGPVR Unmodified 1418.7882 0.78816332 5203 Q9Y4H2 IRS2 Insulin receptor substrate 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 62.545 62.599 2 6.2076E-06 71429 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 82.437 57.583 34803000 0 0 0 3110000 2581500 4830800 3642100 0 0 4526800 4614600 4579500 0 0 6917800 40757 5203 36424 339693;339694;339695;339696;339697;339698;339699;339700;339701 269528;269529;269530;269531;269532;269533;269534;269535;269536 269530 8 PVSVAGSPLSPGPVRAPLSR Unmodified 1943.0952 0.095244374 5203 Q9Y4H2 IRS2 Insulin receptor substrate 2 yes yes 0 0 1 By MS/MS By matching By MS/MS 10 0 3 1 1 1 71.817 71.981 3 0.023018 83001 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 24.279 18.85 12203000 0 0 0 0 0 4472000 0 0 0 2471200 0 0 0 0 5260100 40758 5203 36425 339702;339703;339704 269537 269537 1 PVTALEYTFSR Unmodified 1282.6558 0.65575216 1744 P54709 ATP1B3 Sodium/potassium-transporting ATPase subunit beta-3 yes yes 0 0 0 By MS/MS 10 0 1 1 74.435 74.054 2 0.00047189 85580 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 84.17 73.019 7794200 0 0 0 0 7794200 0 0 0 0 0 0 0 0 0 0 40759 1744 36426 339705 269538 269538 1 PVTDSTSAPAPK Unmodified 1169.5928 0.59281755 2581 Q15811 ITSN1 Intersectin-1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 38.426 33.626 2 0.034039 43819 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 48.794 13.438 + 76402000 0 76402000 0 0 0 0 0 0 0 0 0 0 0 0 0 40760 2581 36427 339706;339707 269539 269539 1 PVTGEQIEVFANK Unmodified 1430.7405 0.74054442 3839 Q96FV9 THOC1 THO complex subunit 1 yes yes 0 0 0 By MS/MS 2 0 1 1 72.901 67.356 2 0.0020934 85186 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.026 63.653 57543000 0 57543000 0 0 0 0 0 0 0 0 0 0 0 0 0 40761 3839 36428 339708 269540 269540 1 PVTINVGR Unmodified 854.4974 0.49740102 4941 Q9UJV9 DDX41 Probable ATP-dependent RNA helicase DDX41 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 38.504 38.818 2 0.029462 42040 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.122 21.229 33892000 0 0 0 0 0 0 6422900 0 6524500 0 0 0 5038100 4865300 11041000 40762 4941 36429 339709;339710;339711;339712;339713 269541 269541 1 PVTIPASQVSTQNLK Unmodified 1581.8726 0.87262123 2708 Q53SF7 COBLL1 Cordon-bleu protein-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 62.052 61.689 2 5.986E-19 69790 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 120.96 81.337 178740000 0 40160000 0 7610800 8675600 12470000 9832800 9110000 8604100 15244000 13010000 18746000 9017900 11132000 15128000 40763 2708 36430 339714;339715;339716;339717;339718;339719;339720;339721;339722;339723;339724;339725;339726 269542;269543;269544;269545;269546;269547;269548;269549;269550;269551;269552;269553;269554 269546 13 PVTLELGGK Unmodified 912.52803 0.52803245 1561 P49189 ALDH9A1 4-trimethylaminobutyraldehyde dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.47 3.59 3 2 10 2 2 1 1 1 1 1 1 1 1 1 1 1 53.003 51.217 2 1.2178E-05 63170 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 153.78 103.75 2558100000 121080000 2125900000 50770000 25298000 4973100 13774000 7430700 6969200 7016900 0 29652000 35596000 0 32658000 97023000 40764 1561 36431 339727;339728;339729;339730;339731;339732;339733;339734;339735;339736;339737;339738;339739;339740;339741 269555;269556;269557;269558;269559;269560;269561;269562;269563;269564;269565;269566;269567;269568;269569;269570;269571;269572;269573;269574 269565 16 PVTLPVQEDPKK Unmodified 1349.7555 0.7554662 2859 Q68DQ2 CRYBG3 Very large A-kinase anchor protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 6.25 3.77 1 1 2 2 1 1 46.468 43.878 3 0.0041108 49420 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 36.528 28.543 42699000 0 29992000 0 0 2106100 0 0 0 0 0 0 0 0 0 10601000 40765 2859 36432 339742;339743;339744;339745 269575;269576 269576 2 PVTNSRDTQEVPLEK Unmodified 1711.8741 0.87407779 3120;5227;4251 Q7Z739;Q9BYJ9;Q9Y5A9 YTHDF3;YTHDF1;YTHDF2 YTH domain-containing family protein 3;YTH domain-containing family protein 1;YTH domain-containing family protein 2 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.8 3.92 2 3 1 1 1 1 1 35.563 34.052 3 0.0069004 36267 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.555 19.459 49659000 0 17278000 4522000 0 0 9491000 0 0 8902700 0 0 0 0 0 9465700 40766 3120;4251;5227 36433 339746;339747;339748;339749;339750 269577;269578;269579;269580 269579 2 PVTTNLK Unmodified 771.44905 0.44905385 3299 Q8N0T1 C8orf59 Uncharacterized protein C8orf59 yes yes 0 0 0 By MS/MS 2 0 1 1 18.567 15.083 2 0.032506 19753 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.512 48.867 23413000 0 23413000 0 0 0 0 0 0 0 0 0 0 0 0 0 40767 3299 36434 339751 269581 269581 1 PVTTPEEIAQVATISANGDK Unmodified 2040.0375 0.037514303 930 P10809 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.54 3.64 9 2 24 3 6 2 2 2 2 2 2 2 2 2 2 2 2 2 82.423 81.265 2;3 1.3435E-124 94411 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 193.19 174.41 12409000000 47304000 8741200000 53823000 131820000 221940000 312460000 249080000 257870000 222970000 559150000 324500000 325260000 211300000 241000000 509530000 40768 930 36435 339752;339753;339754;339755;339756;339757;339758;339759;339760;339761;339762;339763;339764;339765;339766;339767;339768;339769;339770;339771;339772;339773;339774;339775;339776;339777;339778;339779;339780;339781;339782;339783;339784;339785;339786 269582;269583;269584;269585;269586;269587;269588;269589;269590;269591;269592;269593;269594;269595;269596;269597;269598;269599;269600;269601;269602;269603;269604;269605;269606;269607;269608;269609;269610;269611;269612;269613 269583 25 PVTVEPMDQLDDEEGLPEK Oxidation (M) 2155.9831 0.98309547 2508 Q15233 NONO Non-POU domain-containing octamer-binding protein yes yes 0 1 0 By matching By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 16 1 2 2 2 1 1 1 2 1 1 2 66.289 66.376 2 6.3689E-10 75235 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.718 77.347 73976000 0 0 0 2673000 3973100 10941000 9866900 1963200 0 4409000 6463500 12492000 3385400 4219100 13590000 40769 2508 36436 339787;339788;339789;339790;339791;339792;339793;339794;339795;339796;339797;339798;339799;339800;339801;339802 269614;269615;269616;269617;269618;269619 269617 4126 6 PVTVEPMDQLDDEEGLPEK Unmodified 2139.9882 0.98818085 2508 Q15233 NONO Non-POU domain-containing octamer-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 1 2 2 2 1 2 2 76.729 76.781 2;3 1.3006E-51 88756 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 161.63 148.75 140880000 0 0 0 3678800 4699100 14505000 8189600 7780100 2631900 14600000 16529000 14393000 3041900 15247000 35583000 40770 2508 36436 339803;339804;339805;339806;339807;339808;339809;339810;339811;339812;339813;339814;339815;339816;339817;339818;339819;339820;339821;339822;339823;339824 269620;269621;269622;269623;269624;269625;269626;269627;269628;269629 269627 10 PVVAEFHGTK Unmodified 1083.5713 0.57129425 85 CON__Q29443;CON__Q0IIK2 yes no 0 0 0 By MS/MS 2 0 1 1 34.26 30.953 2 0.014232 39086 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 69.812 55.143 + 3092500 0 0 3092500 0 0 0 0 0 0 0 0 0 0 0 0 40771 85 36437 339825 269630 269630 1 PVVAEFYGSK Unmodified 1095.5601 0.56006086 763 P02787;CON__Q2HJF0 TF Serotransferrin yes no 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 54.247 54.001 2 0.01243 61043 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 52.49 41.662 49521000 0 0 0 17200000 0 0 0 32321000 0 0 0 0 0 0 0 40772 763 36438 339826;339827 269631;269632;269633 269631 3 PVVDGEEGEPHSISPR Unmodified 1703.8115 0.81147753 1373 P36507 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 38.283 38.39 3 0.0032975 41579 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.089 29.66 26050000 0 0 0 2301000 2056700 3419200 3200400 0 2382600 0 0 4974100 0 0 7715600 40773 1373 36439 339828;339829;339830;339831;339832;339833;339834 269634;269635;269636 269635 3 PVVFSPTLMLTDEEK Unmodified 1704.8644 0.86442431 1420 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 93.4 89.343 2 7.4048E-40 111224 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 171.05 160.13 40817000 0 40817000 0 0 0 0 0 0 0 0 0 0 0 0 0 40774 1420 36440 339835;339836 269637;269638;269639 269638 3 PVVFSPTLMLTDEEK Oxidation (M) 1720.8593 0.85933893 1420 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 yes yes 0 1 0 By MS/MS 3 0 1 1 85.582 82.359 2 0.014454 98604 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 45.879 37.366 4381200 0 4381200 0 0 0 0 0 0 0 0 0 0 0 0 0 40775 1420 36440 339837 269640 269640 2235 1 PVVGIIYPPPEVR Unmodified 1434.8235 0.82348619 2539 Q15459 SF3A1 Splicing factor 3A subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 2 2 2 2 1 2 2 1 1 2 81.625 81.682 2;3 1.6681E-09 93955 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 136.33 117.08 308040000 0 0 0 7148200 12549000 47898000 15090000 17725000 35796000 13968000 22758000 40074000 12298000 28603000 54129000 40776 2539 36441 339838;339839;339840;339841;339842;339843;339844;339845;339846;339847;339848;339849;339850;339851;339852;339853;339854;339855;339856;339857;339858 269641;269642;269643;269644;269645;269646;269647;269648;269649;269650;269651;269652 269645 11 PVVHPTATPSTVPSSPFTLQSDHQPK Unmodified 2754.3977 0.39769356 4138 Q9BTA9 WAC WW domain-containing adapter protein with coiled-coil yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 69.779 69.225 4 8.3603E-34 78852 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.547 61.186 298000000 29686000 0 0 5757600 6783400 34971000 15443000 22508000 22855000 20292000 21059000 26186000 20347000 23565000 48544000 40777 4138 36442 339859;339860;339861;339862;339863;339864;339865;339866;339867;339868;339869;339870;339871 269653;269654;269655;269656;269657;269658;269659;269660;269661;269662;269663;269664 269656 11 PVVLRTNDETEVTK Unmodified 1599.8468 0.84680041 5315 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 76.289 76.215 3 0.027147 88299 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 20.585 0 + 20552000 0 0 0 3254400 0 0 0 4176200 0 0 0 0 13122000 0 0 40778 5315 36443 339872;339873;339874 269665;269666;269667 269666 3 PVVTISDEPDILYK Unmodified 1587.8396 0.83958976 1999 P82664 MRPS10 28S ribosomal protein S10, mitochondrial yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 83.892 79.885 2 0.0054503 99456 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.701 83.604 42061000 0 42061000 0 0 0 0 0 0 0 0 0 0 0 0 0 40779 1999 36444 339875;339876 269668;269669 269668 1 PVVVLQK Unmodified 781.50617 0.5061748 2891 Q6KC79 NIPBL Nipped-B-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.073 37.253 2 0.023439 41493 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 85.061 56.195 57374000 0 0 0 2763600 3844500 4000700 4233700 4574200 3321900 5232500 5660400 6771600 4943600 5141900 6885900 40780 2891 36445 339877;339878;339879;339880;339881;339882;339883;339884;339885;339886;339887;339888 269670;269671;269672;269673;269674;269675;269676;269677;269678 269670 9 PVVVNTTPVR Unmodified 1080.6291 0.62914348 2893 Q6MZP7 LIN54 Protein lin-54 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 40.738 41.067 2 0.0017421 44585 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.948 75.681 42290000 0 0 0 0 0 4129900 4703000 0 4206300 5935300 6424500 5547500 0 3909400 7434400 40781 2893 36446 339889;339890;339891;339892;339893;339894;339895;339896 269679;269680;269681 269679 3 PVWYSPK Unmodified 875.45414 0.45413923 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.9 3.81 3 1 6 1 2 1 1 1 1 1 2 49.389 46.95 2 0.011257 64590 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 148.07 122.52 986740000 519070000 193210000 150180000 0 16553000 0 25853000 0 0 0 0 40796000 0 41081000 0 40782 848 36447 339897;339898;339899;339900;339901;339902;339903;339904;339905;339906 269682;269683;269684;269685;269686;269687;269688;269689;269690;269691;269692;269693 269686 12 PVYHAITK Unmodified 927.5178 0.51780212 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 19.466 18.511 2 0.010495 27440 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 133.79 94.128 184850000 90089000 15900000 13311000 0 6147600 7725500 4553800 0 3853800 8372000 9067500 0 0 9586200 16245000 40783 528 36448 339907;339908;339909;339910;339911;339912;339913;339914;339915;339916;339917 269694;269695;269696;269697;269698;269699 269697 6 PVYIPEVELNHK Unmodified 1436.7664 0.76636524 2401 Q14258 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 72.291 70.97 3 4.9235E-32 90730 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 162.36 157.24 345620000 60360000 85808000 60259000 4234300 3818500 15900000 5350500 9687100 10866000 13715000 12416000 14901000 8880800 12485000 26940000 40784 2401 36449 339918;339919;339920;339921;339922;339923;339924;339925;339926;339927;339928;339929;339930;339931;339932;339933;339934 269700;269701;269702;269703;269704;269705;269706;269707;269708;269709;269710 269701 10 PVYPGQTLQTEMWK Unmodified 1676.8232 0.82322819 1667 P51659 HSD17B4 Peroxisomal multifunctional enzyme type 2;(3R)-hydroxyacyl-CoA dehydrogenase;Enoyl-CoA hydratase 2 yes yes 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 77.954 78.112 2 0.0087003 90132 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 52.79 27.573 10456000 0 0 0 0 0 0 0 4258400 0 2176000 0 4021600 0 0 0 40785 1667 36450 339935;339936;339937 269711 269711 1 PVYRVAEITGVVETAK Unmodified 1730.9567 0.95668521 3618 Q92541 RTF1 RNA polymerase-associated protein RTF1 homolog yes yes 0 0 1 By MS/MS 2 0 1 1 80.225 72.095 3 0.037225 94610 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 30.593 19.218 13887000 13887000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40786 3618 36451 339938 269712 269712 1 PVYVFDGKPPQLK Unmodified 1486.8184 0.81840081 1405 P39748 FEN1 Flap endonuclease 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.64 2.9 1 1 9 1 1 1 1 2 1 1 1 1 1 71.417 70.987 3 0.00014403 81262 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 83.226 73.943 491220000 0 8912100 7373900 0 0 114840000 0 2037100 51451000 90258000 0 63384000 30379000 37155000 85427000 40787 1405 36452 339939;339940;339941;339942;339943;339944;339945;339946;339947;339948;339949 269713;269714;269715;269716;269717;269718;269719;269720;269721;269722 269715 8 PWDDETDMAK Unmodified 1206.4863 0.48630357 1174 P24534 EEF1B2 Elongation factor 1-beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 40.158 39.137 2 0.004401 48895 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.07 98.496 49133000 0 39355000 0 0 0 2759000 0 0 0 0 0 0 0 1935500 5083100 40788 1174 36453 339950;339951;339952;339953 269723;269724 269724 1 PWDDETDMAK Oxidation (M) 1222.4812 0.48121819 1174 P24534 EEF1B2 Elongation factor 1-beta yes yes 0 1 0 By MS/MS 2 0 1 1 27.578 23.273 2 0.0004652 30754 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.73 116.73 43690000 0 43690000 0 0 0 0 0 0 0 0 0 0 0 0 0 40789 1174 36453 339954 269725;269726 269726 1701 2 PWFEVGDENSGWSAQK Unmodified 1835.8115 0.81147753 430 O60763 USO1 General vesicular transport factor p115 yes yes 0 0 0 By MS/MS 3 0 1 1 82.686 79.414 2 0.0015909 95308 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 80.763 64.131 2639500 0 2639500 0 0 0 0 0 0 0 0 0 0 0 0 0 40790 430 36454 339955 269727;269728 269728 2 PWIPSSPAPSSENGGPASPGLPAEASGSGPGSPHLHPPDK Unmodified 3822.8238 0.82378014 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 0 By MS/MS 2 0 1 1 81.289 73.159 4 1.4482E-44 95928 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.46 71.152 23074000 23074000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40791 4285 36455 339956 269729;269730 269730 2 PWISLPR Unmodified 867.49667 0.49667274 1905 P62701;Q8TD47;P22090 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.909 75.971 2 0.01787 86961 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 113.08 41.724 1080300000 0 0 0 34071000 27983000 104250000 52351000 68808000 81063000 91309000 95968000 121600000 95716000 87447000 219710000 40792 1905 36456 339957;339958;339959;339960;339961;339962;339963;339964;339965;339966;339967;339968 269731;269732;269733;269734;269735;269736;269737 269733 6 PWLFTEIK Unmodified 1032.5644 0.56441796 3848 Q96G46 DUS3L tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like yes yes 0 0 0 By MS/MS 2 0 1 1 92.578 84.448 2 0.025379 109418 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.229 43.07 10026000 10026000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40793 3848 36457 339969 269738 269738 1 PWPDATYGTGSASR Unmodified 1464.6634 0.66335673 5122 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 50.085 50.322 2 0.0044242 56999 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 63.408 50.452 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40794 5122 36458 339970;339971 269739;269740 269740 2 PWRTEQTEDLK Unmodified 1401.6888 0.6888432 4107 Q9BRF8 CPPED1 Serine/threonine-protein phosphatase CPPED1 yes yes 0 0 1 By MS/MS 2 0 1 1 39.45 32.828 3 0.00079414 45616 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.911 55.068 37269000 37269000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40795 4107 36459 339972 269741;269742 269741 2 PWSQHYHQGYY Unmodified 1464.6211 0.62109799 2046 Q00839 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.04 2.6 3 22 2 1 1 1 2 1 2 2 2 2 2 2 3 2 41.019 40.391 2;3 4.3563E-09 44003 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 163.16 156.03 1352400000 114740000 11729000 0 7344100 3325000 96253000 6237200 24879000 60402000 73472000 85871000 241930000 203580000 135350000 287320000 40796 2046 36460 339973;339974;339975;339976;339977;339978;339979;339980;339981;339982;339983;339984;339985;339986;339987;339988;339989;339990;339991;339992;339993;339994;339995;339996;339997 269743;269744;269745;269746;269747;269748;269749;269750;269751;269752;269753;269754;269755 269755 10 PWSQVDEATIR Unmodified 1300.6412 0.64116473 4421 Q9H6S0 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 53.961 54.288 2 0.027229 60679 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.937 25.8 6910400 0 0 0 0 0 0 0 0 1108300 2199900 0 0 0 0 3602200 40797 4421 36461 339998;339999;340000 269756 269756 1 PWTALDSLQK Unmodified 1157.6081 0.60807369 5282 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 75.383 69.841 2 5.9226E-06 86247 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 128.12 109.35 58662000 43992000 0 14670000 0 0 0 0 0 0 0 0 0 0 0 0 40798 5282 36462 340001;340002 269757;269758 269758 2 PYACLECGK Unmodified 1096.4682 0.46815109 2868 Q6DD87 ZNF787 Zinc finger protein 787 yes yes 0 0 0 By MS/MS 2 0 1 1 34.108 29.465 2 0.01196 38455 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.498 19.246 5559300 0 5559300 0 0 0 0 0 0 0 0 0 0 0 0 0 40799 2868 36463 340003 269759 269759 1 PYAFDRVFQSSTSQEQVYNDCAK Unmodified 2739.2235 0.22349395 1328 P33176 KIF5B Kinesin-1 heavy chain yes yes 0 0 1 By MS/MS 2 0 1 1 80.784 72.654 3 1.1289E-30 95257 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 112.41 105.22 25634000 25634000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40800 1328 36464 340004 269760;269761 269761 2 PYAGILSESMK Unmodified 1194.5955 0.59546009 4512 Q9HCE0 EPG5 Ectopic P granules protein 5 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 73.895 65.699 2 0.0049037 87046 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.986 47.376 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40801 4512 36465 340005 269762 269762 1 PYANQPTVR Unmodified 1044.5352 0.53524309 1086 P19387 POLR2C DNA-directed RNA polymerase II subunit RPB3 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.363 21.567 2 0.0050719 22568 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 84.498 63.198 129570000 0 0 0 6346700 5840800 11215000 7475600 5132600 7819300 13812000 14853000 15836000 8854700 13490000 18896000 40802 1086 36466 340006;340007;340008;340009;340010;340011;340012;340013;340014;340015;340016;340017 269763;269764;269765 269763 3 PYANQPTVRITELTDENVK Unmodified 2187.1172 0.11716161 1086 P19387 POLR2C DNA-directed RNA polymerase II subunit RPB3 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 75.249 71.429 3 0.0002238 89915 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 59.512 43.389 61861000 0 26995000 34866000 0 0 0 0 0 0 0 0 0 0 0 0 40803 1086 36467 340018;340019;340020 269766;269767;269768 269766 3 PYAVDFQR Unmodified 994.48723 0.48723027 2101 Q04446 GBE1 1,4-alpha-glucan-branching enzyme yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 48.754 48.812 2 0.030197 54604 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.676 35.394 29014000 0 0 0 4765800 0 0 0 0 0 0 0 24248000 0 0 0 40804 2101 36468 340021;340022 269769 269769 1 PYCNAHYPK Unmodified 1148.5073 0.50731378 2452 Q14847 LASP1 LIM and SH3 domain protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 20.944 17.195 3 0.0045359 24483 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 122.52 117.2 85805000 54086000 16427000 15291000 0 0 0 0 0 0 0 0 0 0 0 0 40805 2452 36469 340023;340024;340025 269770;269771 269770 1 PYCNHPCYAAMFGPK Unmodified 1811.7582 0.75820187 1618 P50238 CRIP1 Cysteine-rich protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 73.353 65.157 3 0.015851 86349 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 28.11 27.112 21053000 21053000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40806 1618 36470 340026 269772 269772 1 PYCNHPCYAAMFGPK Oxidation (M) 1827.7531 0.75311649 1618 P50238 CRIP1 Cysteine-rich protein 1 yes yes 0 1 0 By MS/MS 2 0 1 1 58.238 50.032 3 0.00019024 68190 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.181 53.647 9807500 9807500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40807 1618 36470 340027 269773 269773 2598 0 PYDDDAEYMK Oxidation (M) 1261.4809 0.48088384 2228 Q13045 FLII Protein flightless-1 homolog yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 22.191 22.291 2 0.006285 22855 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 57.59 52.624 22281000 0 0 0 2249400 1844900 3609400 0 1526300 2693700 0 5300900 0 5056100 0 0 40808 2228 36471 340028;340029;340030;340031;340032;340033;340034 269774;269775;269776;269777 269776 3622 4 PYDDDAEYMK Unmodified 1245.486 0.48596922 2228 Q13045 FLII Protein flightless-1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 36.215 36 2 0.0016732 38835 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.044 66.672 118120000 0 51094000 0 4515500 3659300 5550400 4048200 3239800 3118600 5898300 6013300 9544200 6055900 6341800 9039000 40809 2228 36471 340035;340036;340037;340038;340039;340040;340041;340042;340043;340044;340045;340046;340047 269778;269779;269780;269781;269782;269783;269784 269780 7 PYDGIPASEISSILEK Unmodified 1717.8774 0.87743183 732 P00533 EGFR Epidermal growth factor receptor yes yes 0 0 0 By MS/MS 2 0 1 1 94.065 89.169 2 0.0012374 110666 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.617 57.679 20461000 0 20461000 0 0 0 0 0 0 0 0 0 0 0 0 0 40810 732 36472 340048 269785 269785 1 PYDVLCNEIIAER Unmodified 1590.7712 0.77119262 4430 Q9H788 SH2D4A SH2 domain-containing protein 4A yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 78.137 78.135 2 0.0010222 90364 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 79.82 63.567 5271100 0 0 0 0 0 5271100 0 0 0 0 0 0 0 0 0 40811 4430 36473 340049;340050 269786;269787 269786 2 PYDWTYTTDYK Unmodified 1451.6245 0.62451161 529 O75663 TIPRL TIP41-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching 6.8 3.92 2 3 1 1 1 1 1 67.406 65.58 2 0.0066235 75503 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 70.552 63.492 122560000 0 111130000 2285200 0 0 3954200 0 0 0 3054100 2135500 0 0 0 0 40812 529 36474 340051;340052;340053;340054;340055 269788;269789;269790 269788 3 PYECNICK Unmodified 1082.4525 0.45250102 647 O95365 ZBTB7A Zinc finger and BTB domain-containing protein 7A yes yes 0 0 0 By MS/MS 2 0 1 1 25.78 21.577 2 0.0025317 28475 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.62 45.765 10070000 0 10070000 0 0 0 0 0 0 0 0 0 0 0 0 0 40813 647 36475 340056 269791 269791 1 PYEGSILEADCDILIPAASEK Unmodified 2290.1039 0.10387931 721 P00367 GLUD1 Glutamate dehydrogenase 1, mitochondrial yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 91.749 87.687 3 0.0026716 104857 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 37.112 34.117 68010000 0 68010000 0 0 0 0 0 0 0 0 0 0 0 0 0 40814 721 36476 340057;340058 269792 269792 1 PYESVMK Oxidation (M) 868.40005 0.40005474 1285 P30566 ADSL Adenylosuccinate lyase yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 14.151 10.47 2 0.033887 13965 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.613 58.991 105850000 6344500 99504000 0 0 0 0 0 0 0 0 0 0 0 0 0 40815 1285 36477 340059;340060 269793;269794 269794 2 PYESVMK Unmodified 852.40514 0.40514012 1285 P30566 ADSL Adenylosuccinate lyase yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 6.57 3.96 3 4 1 1 1 1 1 1 1 26.077 24.532 2 0.024035 25192 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 83.614 65.848 347630000 12383000 298140000 5323100 0 0 0 0 0 0 0 5195400 5996900 0 3618600 16970000 40816 1285 36477 340061;340062;340063;340064;340065;340066;340067 269795;269796;269797 269797 3 PYESYTGQNVK Unmodified 1284.5986 0.59863121 2683 Q4G0F5 VPS26B Vacuolar protein sorting-associated protein 26B yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 31.843 27.396 2 0.0039391 35599 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.044 80.224 116500000 0 116500000 0 0 0 0 0 0 0 0 0 0 0 0 0 40817 2683 36478 340068;340069 269798;269799 269798 2 PYFLEAYRPIR Unmodified 1423.7612 0.76122028 1755 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 75.044 75.267 3 0.00019514 86236 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.763 74.286 12105000 0 0 0 0 0 0 0 0 0 0 0 0 0 1572700 10532000 40818 1755 36479 340070;340071 269800 269800 1 PYFLTDGTGTVTPANASGINDGAAAVVLMK Oxidation (M) 2966.4695 0.46953788 4207 Q9BWD1 ACAT2 Acetyl-CoA acetyltransferase, cytosolic yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 91.226 87.542 3 8.5347E-104 108563 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.03 127.1 84434000 0 81552000 2882600 0 0 0 0 0 0 0 0 0 0 0 0 40819 4207 36480 340072;340073 269801;269802 269801 5687 2 PYFLTDGTGTVTPANASGINDGAAAVVLMK Unmodified 2950.4746 0.47462326 4207 Q9BWD1 ACAT2 Acetyl-CoA acetyltransferase, cytosolic yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 95.319 91.288 3 1.8859E-26 113230 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.65 74.577 31727000 0 31727000 0 0 0 0 0 0 0 0 0 0 0 0 0 40820 4207 36480 340074;340075 269803;269804 269803 2 PYFPIPEEYTFIQNVPLEDR Unmodified 2466.2107 0.21072764 2046 Q00839 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 2 1 1 2 96.577 96.602 2;3 5.2747E-53 111866 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 118.24 115.4 29075000 0 0 0 9224100 0 0 0 0 0 6579100 3692800 0 0 0 9579100 40821 2046 36481 340076;340077;340078;340079;340080;340081 269805;269806;269807;269808;269809;269810 269809 6 PYGAGPTEPAHPVDER Unmodified 1691.7903 0.79034816 2956 Q6PIW4 FIGNL1 Fidgetin-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.51 32.695 3 3.7124E-05 35778 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 87.447 80.077 118380000 0 0 0 5629700 7935800 11039000 7941800 6897100 6915600 12178000 12534000 13768000 10460000 8006300 15077000 40822 2956 36482 340082;340083;340084;340085;340086;340087;340088;340089;340090;340091;340092;340093 269811;269812;269813;269814;269815;269816;269817;269818;269819;269820 269812 5 PYGALGLEVPGK Unmodified 1199.655 0.65502388 202 O14686 KMT2D Histone-lysine N-methyltransferase 2D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 74.416 72.875 2 0.0009182 83870 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 72.643 54.657 33137000 0 23764000 0 0 0 5442400 0 0 3931200 0 0 0 0 0 0 40823 202 36483 340094;340095;340096 269821;269822;269823 269821 3 PYGGSGPLYTCVPAGSPASSSTLEGK Unmodified 2539.1901 0.19006855 485 O75362 ZNF217 Zinc finger protein 217 yes yes 0 0 0 By MS/MS 2 0 1 1 77.774 72.998 3 0.0034803 91090 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 16.141 8.6952 22318000 0 22318000 0 0 0 0 0 0 0 0 0 0 0 0 0 40824 485 36484 340097 269824 269824 1 PYIAPSDLERK Unmodified 1287.6823 0.68230126 3456 Q8NHH9 ATL2 Atlastin-2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 47.286 46.666 3 0.008333 58315 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 51.998 48.87 157040000 0 53215000 0 5284700 4687400 11056000 4972300 7823600 7234800 9465600 11709000 8941800 8734200 8083100 15836000 40825 3456 36485 340098;340099;340100;340101;340102;340103;340104;340105;340106;340107;340108;340109;340110;340111 269825;269826;269827;269828;269829;269830;269831;269832;269833;269834;269835 269830 10 PYIQVDIGGGQTK Unmodified 1374.7143 0.71432967 932 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.1 2.34 6 3 1 5 3 1 1 69.408 64.279 2 4.4183E-08 75967 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 126.19 99.079 202970000 40252000 153710000 3651700 0 0 0 0 0 0 0 0 0 0 0 5363200 40826 932 36486 340112;340113;340114;340115;340116;340117;340118;340119;340120;340121 269836;269837;269838;269839;269840;269841;269842;269843 269841 6 PYISNTLPSDAPK Unmodified 1401.714 0.71399532 2708 Q53SF7 COBLL1 Cordon-bleu protein-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 2 56.257 56.363 2 1.4437E-11 63801 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 115.57 85.764 96725000 0 0 0 8958600 7981800 9482300 8326300 7459100 6673000 0 13465000 0 0 0 34379000 40827 2708 36487 340122;340123;340124;340125;340126;340127;340128;340129;340130;340131;340132 269844;269845;269846;269847;269848;269849;269850;269851;269852;269853;269854;269855 269845 11 PYIWEYSR Unmodified 1112.5291 0.52909508 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 69.243 69.48 2 0.0074646 79899 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 89.55 75.393 63291000 0 0 0 0 0 14050000 1863900 3213100 0 0 8244600 10580000 0 0 25339000 40828 848 36488 340133;340134;340135;340136;340137;340138 269856;269857;269858;269859 269856 4 PYLGSEDVVK Unmodified 1105.5655 0.56554017 5275 Q9Y6B7 AP4B1 AP-4 complex subunit beta-1 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 47.542 47.775 2 0.0070449 54070 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 63.419 25.286 42302000 0 0 0 2669800 0 4609600 3012900 4570300 0 4949900 3363800 5833600 4804600 2711100 5776600 40829 5275 36489 340139;340140;340141;340142;340143;340144;340145;340146;340147;340148 269860;269861;269862;269863;269864 269860 5 PYLISGADDR Unmodified 1105.5404 0.54038805 1358 P35606 COPB2 Coatomer subunit beta' yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 46.167 46.334 2 0.001504 52223 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 90.657 67.228 224930000 0 0 0 16461000 14938000 22305000 12436000 0 12978000 20090000 23945000 21222000 21375000 18575000 40609000 40830 1358 36490 340149;340150;340151;340152;340153;340154;340155;340156;340157;340158;340159 269865;269866;269867;269868;269869;269870;269871;269872;269873;269874;269875 269866 10 PYLISGADDRLVK Unmodified 1445.7878 0.78782897 1358 P35606 COPB2 Coatomer subunit beta' yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8 3.46 4 12 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 65.467 64.215 3 2.2032E-08 85180 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.66 88.982 932890000 502520000 100770000 62824000 10169000 6546700 23397000 8612600 14073000 19679000 25169000 32320000 28811000 19260000 24122000 54615000 40831 1358 36491 340160;340161;340162;340163;340164;340165;340166;340167;340168;340169;340170;340171;340172;340173;340174;340175 269876;269877;269878;269879;269880;269881;269882;269883;269884;269885;269886;269887;269888;269889;269890;269891 269881 8 PYLSPDILEEK Unmodified 1302.6707 0.67073352 2869 Q6DD88 ATL3 Atlastin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 78.506 77.378 2 1.3809E-06 95667 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.96 66.951 604710000 9639600 347750000 3825000 14015000 14244000 19661000 14968000 17083000 13181000 23693000 25599000 32938000 20956000 16621000 30536000 40832 2869 36492 340176;340177;340178;340179;340180;340181;340182;340183;340184;340185;340186;340187;340188;340189;340190;340191 269892;269893;269894;269895;269896;269897;269898;269899;269900;269901;269902;269903;269904 269895 13 PYMAPER Oxidation (M) 878.39564 0.39563807 1688;1491;1505 P45985;P46734;P52564 MAP2K4;MAP2K3;MAP2K6 Dual specificity mitogen-activated protein kinase kinase 4;Dual specificity mitogen-activated protein kinase kinase 3;Dual specificity mitogen-activated protein kinase kinase 6 no no 0 1 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 14.196 14.37 2 0.042348 13500 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 52.636 34.788 48003000 0 0 0 0 5404400 8151300 0 0 4468100 7847600 0 6754700 0 8348100 7028800 40833 1491;1505;1688 36493 340192;340193;340194;340195;340196;340197;340198 269905;269906 269906 2379 2 PYMAPER Unmodified 862.40072 0.40072345 1688;1491;1505 P45985;P46734;P52564 MAP2K4;MAP2K3;MAP2K6 Dual specificity mitogen-activated protein kinase kinase 4;Dual specificity mitogen-activated protein kinase kinase 3;Dual specificity mitogen-activated protein kinase kinase 6 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 22.237 22.5 2 0.023725 23493 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 84.244 36.002 133820000 0 0 0 0 0 16545000 9943600 8718700 7666300 16026000 0 21518000 15686000 0 37720000 40834 1491;1505;1688 36493 340199;340200;340201;340202;340203;340204;340205;340206 269907 269907 1 PYMAPERINPELNQK Oxidation (M) 1814.8985 0.8985184 1688;1505 P46734;P52564 MAP2K3;MAP2K6 Dual specificity mitogen-activated protein kinase kinase 3;Dual specificity mitogen-activated protein kinase kinase 6 no no 0 1 1 By MS/MS By MS/MS By MS/MS 2.33 0.471 2 1 1 1 1 53.22 47.578 3 2.1339E-58 64716 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 177.88 164.78 293180000 239730000 5380400 48073000 0 0 0 0 0 0 0 0 0 0 0 0 40835 1505;1688 36494 340207;340208;340209 269908;269909;269910;269911 269910 2379 4 PYMAPERINPELNQK Unmodified 1798.9036 0.90360378 1688;1505 P46734;P52564 MAP2K3;MAP2K6 Dual specificity mitogen-activated protein kinase kinase 3;Dual specificity mitogen-activated protein kinase kinase 6 no no 0 0 1 By MS/MS By matching 2 0 3 2 1 63.486 56.699 2;3 9.6427E-65 76101 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 185.18 136.74 590460000 589250000 0 1211100 0 0 0 0 0 0 0 0 0 0 0 0 40836 1505;1688 36494 340210;340211;340212 269912;269913;269914 269912 3 PYMTVSSEFPAAR Unmodified 1454.6864 0.68640036 2989 Q6W2J9 BCOR BCL-6 corepressor yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 7 1 1 1 1 1 1 1 69.46 69.68 2 0.0054303 79741 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 48.981 28.111 21971000 0 0 0 0 0 0 1746900 2241000 1825900 4095200 4222400 0 0 2293000 5546200 40837 2989 36495 340213;340214;340215;340216;340217;340218;340219 269915;269916;269917 269916 3 PYMTVSSEFPAAR Oxidation (M) 1470.6813 0.68131498 2989 Q6W2J9 BCOR BCL-6 corepressor yes yes 0 1 0 By MS/MS By matching By matching 10 0 3 1 1 1 55.479 55.712 2 5.165E-05 63854 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 86.624 66.863 7919900 0 0 0 0 2213300 0 0 0 0 0 0 3337000 0 0 2369600 40838 2989 36495 340220;340221;340222 269918 269918 4605 1 PYNAEDNENFK Unmodified 1339.5681 0.56805936 4703 Q9NWV4 C1orf123 UPF0587 protein C1orf123 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.5 3.55 1 1 4 2 1 1 1 1 29.32 27.912 2 4.6807E-05 34839 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.39 110.1 227570000 0 203530000 0 0 0 0 0 0 0 0 4633100 5461200 0 0 13945000 40839 4703 36496 340223;340224;340225;340226;340227;340228 269919;269920;269921;269922 269919 4 PYNPFEEEEEDKEEEAPAAPSLATSPALGHPESTPK Unmodified 3892.7803 0.78030315 3322 Q8N3F8 MICALL1 MICAL-like protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 81.48 76.141 4 1.7161E-34 97690 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.534 72.407 44781000 34881000 0 9900100 0 0 0 0 0 0 0 0 0 0 0 0 40840 3322 36497 340229;340230 269923;269924;269925 269923 3 PYPDDENLVEVK Unmodified 1416.6773 0.67727546 1771 P55786;A6NEC2 NPEPPS;NPEPPSL1 Puromycin-sensitive aminopeptidase;Puromycin-sensitive aminopeptidase-like protein yes no 0 0 0 By MS/MS 2 0 1 1 64 58.092 2 0.0035898 74429 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.973 62.909 31153000 0 31153000 0 0 0 0 0 0 0 0 0 0 0 0 0 40841 1771 36498 340231 269926 269926 1 PYPVSPSDK Unmodified 988.48656 0.48656157 1441 P41252 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 26.269 25.223 2 0.0015975 31431 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.74 98.461 494960000 16400000 320380000 2899100 0 6000300 27752000 0 11526000 13706000 21268000 11679000 16859000 10068000 13521000 22904000 40842 1441 36499 340232;340233;340234;340235;340236;340237;340238;340239;340240;340241;340242;340243;340244;340245 269927;269928;269929;269930;269931;269932;269933;269934;269935;269936;269937;269938 269929 6 PYQGSAGFPK Unmodified 1050.5134 0.51344502 1142 P22670 RFX1 MHC class II regulatory factor RFX1 yes yes 0 0 0 By MS/MS 10 0 1 1 33.739 34.208 2 0.040426 37073 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 39.919 21.228 9385800 0 0 0 0 0 0 0 0 0 0 9385800 0 0 0 0 40843 1142 36500 340246 269939 269939 1 PYQLQIYPNER Unmodified 1419.7147 0.71466402 3136 Q86TI2 DPP9 Dipeptidyl peptidase 9 yes yes 0 0 0 By matching By matching By matching By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 66.769 66.95 2 0.00034045 76126 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 118.71 103.12 29195000 0 0 0 0 1207800 0 0 0 0 1972700 4694000 6735700 0 3112000 11472000 40844 3136 36501 340247;340248;340249;340250;340251;340252 269940 269940 1 PYQYPALTPEQK Unmodified 1433.7191 0.7190807 771 P04075 ALDOA Fructose-bisphosphate aldolase A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.62 3.97 2 7 2 15 2 7 2 1 1 1 1 1 1 1 2 2 1 1 2 58.309 56.569 2;3 3.6677E-62 93819 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 236.32 196.05 15688000000 534180000 13568000000 166200000 42789000 25052000 38226000 34154000 60464000 34590000 44766000 198450000 168070000 45756000 156910000 571160000 40845 771 36502 340253;340254;340255;340256;340257;340258;340259;340260;340261;340262;340263;340264;340265;340266;340267;340268;340269;340270;340271;340272;340273;340274;340275;340276;340277;340278 269941;269942;269943;269944;269945;269946;269947;269948;269949;269950;269951;269952;269953;269954;269955;269956;269957;269958;269959;269960;269961;269962;269963;269964;269965;269966;269967;269968;269969;269970;269971;269972;269973;269974 269959 32 PYQYPALTPEQKK Unmodified 1561.814 0.81404372 771 P04075 ALDOA Fructose-bisphosphate aldolase A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.14 3.33 4 1 16 2 3 1 1 1 1 1 1 1 2 2 1 2 2 48.652 47.288 2;3 2.9426E-30 62088 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 163.45 159.65 4455300000 1258900000 2570000000 0 44809000 16099000 7547200 25995000 26000000 6723100 21058000 103540000 107630000 18481000 55207000 193260000 40846 771 36503 340279;340280;340281;340282;340283;340284;340285;340286;340287;340288;340289;340290;340291;340292;340293;340294;340295;340296;340297;340298;340299 269975;269976;269977;269978;269979;269980;269981;269982;269983;269984;269985;269986;269987;269988;269989;269990;269991;269992;269993;269994;269995;269996;269997;269998;269999;270000;270001;270002;270003;270004;270005;270006;270007;270008;270009 269979 35 PYRCSEDNCTK Unmodified 1428.5762 0.57619798 1698 P52747 ZNF143 Zinc finger protein 143 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 7.2858 3.9067 3 0.01705 7151 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.135 44.006 27732000 18083000 9649000 0 0 0 0 0 0 0 0 0 0 0 0 0 40847 1698 36504 340300;340301 270010 270010 1 PYRNEDMSAYVK Unmodified 1471.6766 0.67656396 673 O95619 YEATS4 YEATS domain-containing protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 40.803 39.887 3 1.4573E-05 50641 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 111.94 69.148 236640000 46770000 0 16426000 0 0 19447000 0 17597000 15673000 26644000 23535000 0 22775000 13392000 34379000 40848 673 36505 340302;340303;340304;340305;340306;340307;340308;340309;340310;340311 270011;270012;270013;270014;270015;270016;270017;270018 270017 6 PYRNEDMSAYVK Oxidation (M) 1487.6715 0.67147858 673 O95619 YEATS4 YEATS domain-containing protein 4 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 21.154 21.347 3 0.0065141 22233 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 41.242 27.653 43387000 0 0 0 0 0 7950600 9341700 6244700 0 0 0 19850000 0 0 0 40849 673 36505 340312;340313;340314;340315 270019 270019 817 1 PYSSGGPR Unmodified 819.38752 0.38751622 829 P06744 GPI Glucose-6-phosphate isomerase yes yes 0 0 0 By MS/MS 10 0 1 1 6.7901 7.1245 2 0.01661 4462 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.993 38.127 12708000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12708000 40850 829 36506 340316 270020 270020 1 PYTLALAFK Unmodified 1022.5801 0.58006802 1611 P49914 MTHFS 5-formyltetrahydrofolate cyclo-ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 80.682 80.745 2 0.0038025 93349 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 96.492 76.855 31336000 0 0 0 0 3507500 7429400 0 0 3190900 5085800 3569500 8553300 0 0 0 40851 1611 36507 340317;340318;340319;340320;340321;340322;340323 270021;270022;270023;270024;270025;270026;270027 270026 7 PYTLEEQK Unmodified 1006.4971 0.49712625 1744 P54709 ATP1B3 Sodium/potassium-transporting ATPase subunit beta-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 27.311 26.385 2 0.0052025 28691 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 143.85 106.76 127710000 0 58616000 0 0 10804000 10126000 9948700 7130400 9252800 11459000 0 0 10375000 0 0 40852 1744 36508 340324;340325;340326;340327;340328;340329;340330;340331;340332 270028;270029;270030;270031;270032 270028 4 PYTSFQELVGEK Unmodified 1396.6874 0.68744622 1150 P23219 PTGS1 Prostaglandin G/H synthase 1 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 75.604 75.441 2 0.002522 87597 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 74.944 53.481 8203500 0 0 0 4359800 0 0 0 0 3843700 0 0 0 0 0 0 40853 1150 36509 340333;340334 270033 270033 1 PYTSSARPFER Unmodified 1309.6415 0.64149908 2136 Q07157 TJP1 Tight junction protein ZO-1 yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.423 30.612 3 0.0041189 31914 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.348 49.044 171370000 0 0 0 14901000 9307500 18410000 11100000 8761400 8277500 15016000 12755000 24650000 11439000 11225000 25523000 40854 2136 36510 340335;340336;340337;340338;340339;340340;340341;340342;340343;340344;340345;340346 270034;270035;270036;270037 270036 3 PYVEEGLHPQIIIR Unmodified 1662.9093 0.90934108 4065 Q99832 CCT7 T-complex protein 1 subunit eta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.79 74.853 3 4.5804E-19 85496 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 126.95 115.18 438000000 0 0 0 5273400 8809500 48125000 17552000 42239000 33036000 41520000 41002000 43100000 23352000 25011000 108980000 40855 4065 36511 340347;340348;340349;340350;340351;340352;340353;340354;340355;340356;340357;340358 270038;270039;270040;270041;270042;270043;270044;270045;270046;270047;270048;270049;270050;270051 270047 14 PYYEVRLASVLGSEPSLDSEVTSK Unmodified 2625.3174 0.31737756 4737 Q9NY33 DPP3 Dipeptidyl peptidase 3 yes yes 0 0 1 By MS/MS 2 0 1 1 91.821 83.69 3 3.6099E-13 108461 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.102 73.114 9584900 9584900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40856 4737 36512 340359 270052;270053 270052 2 PYYYNSQTK Unmodified 1162.5295 0.52948901 494 O75400 PRPF40A Pre-mRNA-processing factor 40 homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25.271 24.743 2 1.3551E-79 26129 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 236.1 204.81 1114300000 16567000 148490000 0 66840000 35108000 46482000 57784000 89872000 71776000 85151000 97470000 89990000 114100000 71865000 122830000 40857 494 36513 340360;340361;340362;340363;340364;340365;340366;340367;340368;340369;340370;340371;340372;340373 270054;270055;270056;270057;270058;270059;270060;270061;270062;270063;270064;270065;270066;270067;270068;270069;270070;270071 270067 18 QAAAAASSGETPHQVGQTQGPISGDTSK Unmodified 2680.2689 0.26886424 2798 Q5TGY1 TMCO4 Transmembrane and coiled-coil domain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.476 35.658 3 1.0997E-107 39284 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 136.16 128.72 171810000 0 0 0 9979500 11772000 10514000 15880000 17479000 11006000 12325000 12084000 22567000 22887000 13438000 11874000 40858 2798 36514 340374;340375;340376;340377;340378;340379;340380;340381;340382;340383;340384;340385 270072;270073;270074;270075;270076;270077;270078;270079;270080;270081;270082;270083;270084;270085;270086;270087 270076 16 QAAAAGDMEAEVKLSMLCK Unmodified 2021.9584 0.95841782 5347 yes yes 0 0 1 By MS/MS By matching By MS/MS 10 0 4 2 1 1 44.764 45.067 3 0.019214 50559 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 26.548 22.383 + 40516000 0 0 0 0 0 0 24027000 0 0 0 0 5612400 10876000 0 0 40859 5347 36515 340386;340387;340388;340389 270088 270088 1 QAAAAGIFLNNVK Unmodified 1315.7248 0.72483478 4560 Q9NQ88 TIGAR Fructose-2,6-bisphosphatase TIGAR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS 7.44 3.62 2 1 6 1 2 1 1 1 1 1 1 74.51 72.827 2 3.8438E-07 94023 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 111.61 74.416 242740000 146660000 54279000 0 0 0 10722000 0 0 0 6279400 4179300 5777700 0 3350000 11489000 40860 4560 36516 340390;340391;340392;340393;340394;340395;340396;340397;340398 270089;270090;270091;270092;270093;270094 270094 5 QAAAAGPGTSGLAATRPR Unmodified 1651.8754 0.87541519 2092 Q03169 TNFAIP2 Tumor necrosis factor alpha-induced protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 33.251 33.286 3 0.0080371 36604 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 31.111 18.966 40715000 0 0 0 4771400 6432400 6495900 5597600 4141900 0 5777800 0 0 0 0 7497800 40861 2092 36517 340399;340400;340401;340402;340403;340404;340405 270095 270095 1 QAAASATQTIAAAQHAASTPK Unmodified 1994.0181 0.018116265 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.18 3.29 3 1 13 1 2 1 1 1 1 1 1 1 2 1 1 1 1 1 53.787 52.453 3 2.0192E-53 59710 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 95.48 90.478 1821500000 629870000 729650000 16479000 36106000 25565000 50765000 41565000 44656000 20288000 60609000 0 39505000 31314000 30701000 64406000 40862 5187 36518 340406;340407;340408;340409;340410;340411;340412;340413;340414;340415;340416;340417;340418;340419;340420;340421;340422 270096;270097;270098;270099;270100;270101;270102;270103;270104;270105;270106;270107;270108;270109;270110;270111;270112;270113 270112 16 QAADAEMEK Unmodified 991.42806 0.42806041 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 9.1736 9.208 2 0.027409 7699 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 49.418 22.288 5812700 0 0 0 1521100 801360 1241900 0 860060 717560 0 0 0 670670 0 0 40863 2501 36519 340423;340424;340425;340426;340427;340428 270114 270114 1 QAAEVAAEK Unmodified 915.46616 0.46616048 4690 Q9NW64 RBM22 Pre-mRNA-splicing factor RBM22 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 8.3241 8.434 2 0.020004 5956 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.493 9.1443 68429000 0 0 0 3732800 3718600 4188200 3956700 4465700 4363200 6549400 0 10605000 7973600 7478500 11397000 40864 4690 36520 340429;340430;340431;340432;340433;340434;340435;340436;340437;340438;340439 270115;270116;270117;270118 270116 4 QAAEVMGR Oxidation (M) 876.41235 0.41235077 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 1 0 By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 6.5482 6.6923 2 0.04087 3577 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 43.808 29.032 23069000 0 0 0 1810000 0 0 3488600 2655200 2864700 0 0 0 4190200 3865300 4195500 40865 3641 36521 340440;340441;340442;340443;340444;340445;340446 270119 270119 1 QAAGVISLPVGGNK Unmodified 1309.7354 0.73539946 3997 Q96T37 RBM15 Putative RNA-binding protein 15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 68.255 67.92 2 0.00019311 77699 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 81.335 65.138 114800000 0 20595000 0 0 6713800 8387600 8098100 0 7243900 9980600 7494800 13142000 13745000 7770900 11628000 40866 3997 36522 340447;340448;340449;340450;340451;340452;340453;340454;340455;340456;340457;340458;340459 270120;270121;270122;270123;270124;270125;270126;270127;270128;270129;270130 270122 9 QAALEEEQAR Unmodified 1143.552 0.55201537 2300 Q13492 PICALM Phosphatidylinositol-binding clathrin assembly protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 17.976 18.169 2 0.00090518 16707 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 115.7 98.602 366030000 0 0 0 29876000 0 31137000 32790000 30495000 27541000 41075000 42626000 0 34810000 38394000 57283000 40867 2300 36523 340460;340461;340462;340463;340464;340465;340466;340467;340468;340469;340470 270131;270132;270133;270134;270135;270136;270137;270138;270139;270140;270141;270142 270139 12 QAALEEEQARLK Unmodified 1384.731 0.73104237 2300 Q13492 PICALM Phosphatidylinositol-binding clathrin assembly protein yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 39.233 34.845 3 0.0039146 44042 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 80.014 55.723 29640000 0 18883000 10758000 0 0 0 0 0 0 0 0 0 0 0 0 40868 2300 36524 340471;340472;340473 270143;270144;270145;270146 270146 2 QAALQVAEGFISR Unmodified 1388.7412 0.74121312 1407 P40121 CAPG Macrophage-capping protein yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 81.502 81.584 2 0.0018408 94355 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 71.221 61.217 116630000 0 0 0 2631200 0 16986000 4936900 5150200 0 16714000 11127000 16982000 4018900 9272200 28815000 40869 1407 36525 340474;340475;340476;340477;340478;340479;340480;340481;340482;340483 270147;270148;270149 270148 3 QAANLQDCYR Unmodified 1237.551 0.55096951 1474 P43246 MSH2 DNA mismatch repair protein Msh2 yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 28.712 28.775 2 0.0063328 31026 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 65.347 52.72 11789000 0 0 0 0 0 3785500 2204600 0 0 5799400 0 0 0 0 0 40870 1474 36526 340484;340485;340486 270150 270150 1 QAAQTQPSQSSHLPQNQQQQQK Unmodified 2489.2007 0.20072509 2894 Q6N021 TET2 Methylcytosine dioxygenase TET2 yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS 10 0 5 1 1 1 1 1 19.008 19.115 3 0.027967 19449 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 21.2 18.057 10485000 0 0 0 0 1469500 0 0 1849500 1806300 2555700 0 0 2804400 0 0 40871 2894 36527 340487;340488;340489;340490;340491 270151;270152 270151 2 QAASFYCSK Unmodified 1060.4648 0.46478027 1323 P32754 HPD 4-hydroxyphenylpyruvate dioxygenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 29.255 24.876 2 0.016044 32336 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.455 52.032 306870000 18960000 285910000 1993700 0 0 0 0 0 0 0 0 0 0 0 0 40872 1323 36528 340492;340493;340494;340495 270153;270154 270153 2 QAASGLVGQENAR Unmodified 1299.6531 0.6531264 5086 Q9Y265 RUVBL1 RuvB-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 25.957 26.158 2 7.4144E-08 28053 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 98.353 70.611 571030000 0 0 0 43120000 41778000 47697000 36656000 38450000 27517000 50462000 49167000 65121000 48908000 49207000 72949000 40873 5086 36529 340496;340497;340498;340499;340500;340501;340502;340503;340504;340505;340506;340507 270155;270156;270157;270158;270159;270160;270161;270162;270163;270164;270165;270166;270167;270168 270165 14 QAASMAVVIPEAALK Unmodified 1497.8225 0.82249991 3609 Q92503 SEC14L1 SEC14-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 81.851 81.54 2 9.1051E-10 94404 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 123.2 107.31 296760000 0 48855000 0 8797900 19294000 17713000 16429000 23126000 11949000 31870000 27924000 28636000 14073000 19504000 28585000 40874 3609 36530 340508;340509;340510;340511;340512;340513;340514;340515;340516;340517;340518;340519;340520 270169;270170;270171;270172;270173;270174;270175;270176;270177;270178;270179;270180;270181;270182 270180 14 QAASMAVVIPEAALK Oxidation (M) 1513.8174 0.81741453 3609 Q92503 SEC14L1 SEC14-like protein 1 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 72.71 72.754 2 2.9332E-10 84180 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 96.067 87.169 82396000 0 0 0 8707200 0 0 12693000 0 8630900 16305000 0 21619000 14441000 0 0 40875 3609 36530 340521;340522;340523;340524;340525;340526 270183;270184;270185;270186;270187;270188 270186 5105 6 QAASPLEPK Unmodified 939.50255 0.50254598 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 23.329 23.512 2 0.034875 24412 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 46.334 10.978 43961000 0 0 0 4710400 0 5275800 0 5008900 3126000 7223000 0 0 8463900 0 10153000 40876 2459 36531 340527;340528;340529;340530;340531;340532;340533 270189 270189 1 QAASQESEEAGGTGGPPAGVR Unmodified 1954.8981 0.89806071 2839 Q63ZY3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 2 2 2 2 1 1 2 1 1 2 1 1 29.296 29.413 2;3 3.2689E-174 31463 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 206.2 193.22 142490000 0 0 0 10690000 7450600 9809800 10656000 5293100 8246300 16303000 9659000 12805000 25813000 6708500 19060000 40877 2839 36532 340534;340535;340536;340537;340538;340539;340540;340541;340542;340543;340544;340545;340546;340547;340548;340549;340550;340551 270190;270191;270192;270193;270194;270195;270196;270197;270198;270199;270200;270201;270202 270199 13 QAASSLQQASLK Unmodified 1230.6568 0.65681479 1399 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 32.146 32.337 2 2.7703E-08 34665 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 132.32 101.02 190550000 0 0 0 12317000 10398000 0 17463000 17228000 9633300 18100000 28293000 22920000 0 14564000 39632000 40878 1399 36533 340552;340553;340554;340555;340556;340557;340558;340559;340560;340561 270203;270204;270205;270206;270207;270208;270209;270210;270211 270209 7 QAASTSGPTPAASQALNPQAQK Unmodified 2123.0607 0.060709362 3662 Q92793 CREBBP CREB-binding protein yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 44.171 44.352 3 0.0027778 49615 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 30.288 21.242 73930000 0 0 0 0 13999000 15281000 0 8417500 0 0 20031000 0 0 0 16201000 40879 3662 36534 340562;340563;340564;340565;340566 270212;270213;270214 270213 3 QAATMSEVEWR Oxidation (M) 1322.5925 0.59249998 4895 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.055 39.235 2 0.0002271 43762 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 88.496 79.963 111150000 0 0 0 7400800 6489100 9093100 8141000 9742400 8802400 12396000 12676000 10725000 11161000 7120000 7409000 40880 4895 36535 340567;340568;340569;340570;340571;340572;340573;340574;340575;340576;340577;340578 270215;270216;270217;270218;270219;270220;270221;270222;270223;270224;270225 270215 6247 11 QAATMSEVEWR Unmodified 1306.5976 0.59758535 4895 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 54.247 54.392 2 0.0078351 61814 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 64.73 43.282 103070000 0 0 0 10286000 0 8024500 13304000 16177000 7289700 11485000 15573000 0 8550400 0 12376000 40881 4895 36535 340579;340580;340581;340582;340583;340584;340585;340586;340587 270226;270227;270228;270229;270230 270227 5 QAAVQQQIPTK Unmodified 1210.667 0.66698555 3012 Q6ZSZ5 ARHGEF18 Rho guanine nucleotide exchange factor 18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.212 29.404 2 0.040932 30805 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.684 19.444 110860000 0 0 0 7073500 5264100 8894800 6199400 6076900 7954500 10584000 9281000 13345000 7926700 6760000 21496000 40882 3012 36536 340588;340589;340590;340591;340592;340593;340594;340595;340596;340597;340598;340599 270231 270231 1 QACEDELRER Unmodified 1304.5779 0.57791254 463 O75150 RNF40 E3 ubiquitin-protein ligase BRE1B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.677 15.847 3 0.0013257 15667 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 76.143 70.3 227820000 0 0 0 19504000 11192000 12809000 11391000 19715000 11481000 14301000 20147000 25631000 21567000 21218000 38862000 40883 463 36537 340600;340601;340602;340603;340604;340605;340606;340607;340608;340609;340610;340611 270232;270233;270234;270235;270236;270237;270238;270239;270240;270241;270242;270243;270244;270245;270246 270244 13 QACGYEFTSK Unmodified 1189.5074 0.50737336 2329 Q13617 CUL2 Cullin-2 yes yes 0 0 0 By MS/MS 2 0 1 1 35.796 30.949 2 0.0014691 40500 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.79 27.364 59039000 0 59039000 0 0 0 0 0 0 0 0 0 0 0 0 0 40884 2329 36538 340612 270247 270247 1 QACSSLGPVLNESRPVVCER Unmodified 2257.0943 0.094334451 3112 Q7Z6J0 SH3RF1 E3 ubiquitin-protein ligase SH3RF1 yes yes 0 0 1 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 65.208 65.2 3 0.0014131 73902 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 38.888 30.666 11416000 0 0 0 0 2409600 0 0 0 0 2767700 0 0 2792800 3446000 0 40885 3112 36539 340613;340614;340615;340616 270248;270249 270248 2 QACVLMIK Oxidation (M) 977.50381 0.50380831 1356 P35579 MYH9 Myosin-9 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 45.462 45.825 2 0.038383 51523 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 44.447 28.244 97685000 0 0 0 0 0 0 12857000 9552400 11149000 0 10229000 19977000 13161000 10693000 10066000 40886 1356 36540 340617;340618;340619;340620;340621;340622;340623;340624 270250 270250 1 QACVLMIK Unmodified 961.50889 0.50889369 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 54.983 55.028 2 0.02509 63242 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 58.981 41.214 104540000 0 0 0 0 14347000 14298000 8165200 13648000 12021000 20069000 0 0 0 21993000 0 40887 1356 36540 340625;340626;340627;340628;340629;340630;340631 270251 270251 1 QADFEAHNILR Unmodified 1312.6524 0.65239812 1612 P49915 GMPS GMP synthase [glutamine-hydrolyzing] yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 50.334 50.488 3 0.00018453 57053 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 85.958 68.149 568500000 0 0 0 25871000 10693000 87206000 36877000 23292000 17094000 54484000 58716000 54770000 36380000 64043000 99070000 40888 1612 36541 340632;340633;340634;340635;340636;340637;340638;340639;340640;340641;340642;340643 270252;270253;270254;270255;270256;270257;270258;270259;270260;270261;270262;270263;270264;270265;270266;270267;270268;270269;270270;270271;270272 270266 21 QADIMLPALR Oxidation (M) 1142.6118 0.61177885 1802 P58107 EPPK1 Epiplakin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 74.763 74.573 2 0.0054512 86148 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 60.436 47.399 15089000 0 0 0 5456500 3367000 3457800 2807400 0 0 0 0 0 0 0 0 40889 1802 36542 340644;340645;340646;340647 270273;270274;270275 270275 2924 3 QADLYISEGLHPR Unmodified 1497.7576 0.75759147 1410 P40227;Q92526 CCT6A;CCT6B T-complex protein 1 subunit zeta;T-complex protein 1 subunit zeta-2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.62 3.02 5 24 2 1 2 2 2 2 2 2 2 2 2 2 2 2 2 60.848 59.904 2;3 6.5934E-13 67147 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 160.18 143.96 1085800000 41047000 42844000 116360000 24306000 30627000 89027000 56115000 49873000 57117000 79699000 100780000 104030000 56623000 77736000 159660000 40890 1410 36543 340648;340649;340650;340651;340652;340653;340654;340655;340656;340657;340658;340659;340660;340661;340662;340663;340664;340665;340666;340667;340668;340669;340670;340671;340672;340673;340674;340675;340676 270276;270277;270278;270279;270280;270281;270282;270283;270284;270285;270286;270287;270288;270289;270290;270291;270292;270293;270294;270295;270296;270297;270298;270299;270300;270301;270302;270303;270304;270305;270306;270307;270308 270287 28 QADNPHVALYQAR Unmodified 1481.7375 0.73752473 5206 Q9Y4L1 HYOU1 Hypoxia up-regulated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 38.119 38.255 3 0.00097906 42488 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 49.423 39.773 163610000 0 0 0 9965500 6668800 20021000 0 12229000 8600800 21054000 17284000 0 13176000 16760000 37846000 40891 5206 36544 340677;340678;340679;340680;340681;340682;340683;340684;340685;340686 270309;270310;270311;270312;270313;270314;270315;270316 270309 8 QADVNLVNAK Unmodified 1070.572 0.57202253 304 O43175 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35.386 34.531 2 8.3215E-07 38095 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 136.8 105.38 4434700000 77470000 2147300000 3734900 115870000 89517000 262440000 150910000 118250000 99496000 248050000 263760000 209130000 175220000 164630000 308860000 40892 304 36545 340687;340688;340689;340690;340691;340692;340693;340694;340695;340696;340697;340698;340699;340700;340701 270317;270318;270319;270320;270321;270322;270323;270324;270325;270326;270327;270328;270329;270330;270331 270318 13 QADYVPSDQDLLR Unmodified 1518.7314 0.7314363 1938 P63092;Q5JWF2 GNAS Guanine nucleotide-binding protein G(s) subunit alpha isoforms short;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.739 67.885 2 1.1834E-19 77173 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 154.24 125.28 112240000 0 0 0 0 9743200 11077000 7282500 0 7612300 10466000 13617000 14157000 9831700 11999000 16457000 40893 1938 36546 340702;340703;340704;340705;340706;340707;340708;340709;340710;340711;340712;340713 270332;270333;270334;270335;270336;270337;270338;270339;270340;270341;270342;270343 270335 12 QAEAFLNNQEYVLAHTEMPTTLEGAEAAIK Unmodified 3288.5973 0.59725759 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS 2 0 1 1 92.311 89.826 3 0.0010855 108736 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 31.37 29.117 4820300 0 0 4820300 0 0 0 0 0 0 0 0 0 0 0 0 40894 2047 36547 340714 270344 270344 1 QAEALRPFGEAPR Unmodified 1440.7474 0.74736113 1339 P35052 GPC1 Glypican-1;Secreted glypican-1 yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 48.57 48.744 3 0.0011607 54870 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 61.423 42.692 47523000 0 0 0 0 6239100 0 4741200 0 0 7889400 20260000 8393600 0 0 0 40895 1339 36548 340715;340716;340717;340718;340719;340720;340721 270345;270346;270347;270348;270349;270350 270346 5 QAEDCITR Unmodified 991.43929 0.4392938 370 O43813 LANCL1 LanC-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 13.287 13.525 2 0.046168 11899 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 48.283 30.897 13633000 0 0 0 0 0 0 1056900 0 1498400 1587100 2537300 3044900 1635200 2272900 0 40896 370 36549 340722;340723;340724;340725;340726;340727;340728 270351 270351 1 QAEELNEK Unmodified 959.45599 0.45598972 1496 P46063 RECQL ATP-dependent DNA helicase Q1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 9.2208 8.4704 2 0.014055 9605 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.492 54.839 55591000 23201000 19453000 839130 0 871290 1494300 1194000 1276300 0 0 2273700 0 991210 1343400 2652900 40897 1496 36550 340729;340730;340731;340732;340733;340734;340735;340736;340737;340738;340739 270352;270353 270352 2 QAEEQIEHLQR Unmodified 1379.6793 0.67934115 463 O75150 RNF40 E3 ubiquitin-protein ligase BRE1B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 29.853 30.033 3 0.0052581 32060 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 39.58 27.137 110090000 0 0 0 7737700 7135300 7070700 6700000 7627900 4812900 8135200 12476000 16618000 16012000 0 15763000 40898 463 36551 340740;340741;340742;340743;340744;340745;340746;340747;340748;340749;340750 270354;270355;270356 270356 3 QAEEQIEHLQRK Unmodified 1507.7743 0.77430417 463 O75150 RNF40 E3 ubiquitin-protein ligase BRE1B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.823 23.029 3 0.014626 24239 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 33.685 20.918 86156000 0 0 0 5086100 3941500 5652400 4199300 5590300 4569900 8365500 6855700 13445000 11706000 6590700 10154000 40899 463 36552 340751;340752;340753;340754;340755;340756;340757;340758;340759;340760;340761;340762 270357 270357 1 QAEESMVASMR Unmodified 1237.5431 0.54310694 3358 Q8N6H7 ARFGAP2 ADP-ribosylation factor GTPase-activating protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 40.977 41.27 2 0.00026955 46144 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 92.239 63.09 80715000 0 0 0 4856100 0 0 0 16379000 0 12540000 11005000 10406000 0 7826600 17702000 40900 3358 36553 340763;340764;340765;340766;340767;340768;340769;340770;340771;340772 270358;270359;270360;270361;270362;270363;270364;270365;270366 270364 9 QAEESMVASMR 2 Oxidation (M) 1269.5329 0.53293619 3358 Q8N6H7 ARFGAP2 ADP-ribosylation factor GTPase-activating protein 2 yes yes 0 2 0 By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 14 1 1 1 2 1 1 2 1 1 1 1 1 12.521 12.675 2 0.024183 11165 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 41.08 37.509 30926000 0 0 0 1997700 2055500 3137900 2995200 1897400 2155800 3200100 2389400 3300100 2838600 1560900 3397500 40901 3358 36553 340773;340774;340775;340776;340777;340778;340779;340780;340781;340782;340783;340784;340785;340786 270367;270368;270369 270369 2 QAEETAAFEEVMK Unmodified 1481.6708 0.67080988 2976 Q6UUV9 CRTC1 CREB-regulated transcription coactivator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 69.725 68.894 2 0.00064739 78269 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.441 76.951 57164000 0 27530000 0 0 4151700 0 8172100 3575900 0 0 0 0 4935100 8799100 0 40902 2976 36554 340787;340788;340789;340790;340791;340792;340793 270370;270371;270372;270373;270374 270372 5 QAEETYENIPGQSK Unmodified 1592.7318 0.73183023 149 O00410 IPO5 Importin-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38.442 37.754 2 2.0405E-117 41708 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 209.43 202.89 574190000 19255000 15407000 0 28443000 19428000 81847000 33537000 35426000 18924000 59945000 50296000 56363000 32362000 36057000 86899000 40903 149 36555 340794;340795;340796;340797;340798;340799;340800;340801;340802;340803;340804;340805;340806;340807 270375;270376;270377;270378;270379;270380;270381;270382;270383;270384;270385;270386;270387;270388;270389 270387 15 QAEILQESR Unmodified 1072.5513 0.55128709 482 O75347 TBCA Tubulin-specific chaperone A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 30.608 29.16 2 0.0029918 30546 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 135 64.309 506020000 8532600 184190000 0 0 0 0 0 0 0 0 48462000 57315000 0 36703000 170820000 40904 482 36556 340808;340809;340810;340811;340812;340813 270390;270391;270392;270393;270394 270393 4 QAEIMDMK Unmodified 964.43579 0.43578832 348 O43633 CHMP2A Charged multivesicular body protein 2a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.701 38.881 2 0.022739 42818 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 60.91 28.793 167190000 0 0 0 7867400 11102000 14863000 12369000 7943400 7461300 14106000 18135000 21208000 11764000 12386000 27989000 40905 348 36557 340814;340815;340816;340817;340818;340819;340820;340821;340822;340823;340824;340825 270395;270396;270397;270398 270396 4 QAEIMDMK Oxidation (M) 980.4307 0.43070295 348 O43633 CHMP2A Charged multivesicular body protein 2a yes yes 0 1 0 By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 20.263 20.442 2 0.038383 20848 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 44.447 14.262 33790000 0 0 0 3289000 0 2040800 8099300 6211400 4716200 0 4571600 0 0 0 4861700 40906 348 36557 340826;340827;340828;340829;340830;340831;340832 270399 270399 1 QAELEEGRPQHQEQLR Unmodified 1946.9559 0.95585036 158 O00461 GOLIM4 Golgi integral membrane protein 4 yes yes 0 0 1 By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 24.154 24.277 3 0.00050498 24974 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 58.671 42.905 35868000 0 0 0 3084300 2712100 3168500 4985100 2918400 3231900 4249800 4382600 0 0 0 7135900 40907 158 36558 340833;340834;340835;340836;340837;340838;340839;340840;340841 270400;270401;270402;270403;270404 270404 5 QAEMEGAVQSIQGELSK Unmodified 1803.8673 0.86727785 2911 Q6NZI2 PTRF Polymerase I and transcript release factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 76.253 76.254 2 2.7862E-53 87561 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 208.68 192.4 85552000 0 0 0 3243700 6931800 8077800 7329700 0 6320400 12433000 0 19918000 9544100 11753000 0 40908 2911 36559 340842;340843;340844;340845;340846;340847;340848;340849;340850;340851 270405;270406;270407;270408;270409;270410;270411;270412;270413 270408 9 QAEMEGAVQSIQGELSK Oxidation (M) 1819.8622 0.86219247 2911 Q6NZI2 PTRF Polymerase I and transcript release factor yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 62.323 62.039 2 1.9261E-19 70766 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 104.24 87.302 15537000 0 0 0 7139800 0 0 8397100 0 0 0 0 0 0 0 0 40909 2911 36559 340852;340853;340854 270414;270415;270416 270414 4540 3 QAEMLDDLMEK 2 Oxidation (M) 1353.5792 0.57921768 1748 P54819 AK2 Adenylate kinase 2, mitochondrial;Adenylate kinase 2, mitochondrial, N-terminally processed yes yes 0 2 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 39.37 39.616 2 0.00038704 44061 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 74.424 60.217 32540000 0 0 0 0 0 8778000 6713400 0 3495600 3617800 0 4691500 5243600 0 0 40910 1748 36560 340855;340856;340857;340858;340859;340860;340861 270417;270418;270419;270420;270421;270422 270419 2841;2842 6 QAENGMYIR Unmodified 1080.5022 0.50222841 1224 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 30.751 30.929 2 0.012989 32973 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.478 48.828 5440000 0 0 0 1221800 0 0 0 0 0 0 0 0 0 0 4218200 40911 1224 36561 340862;340863 270423 270423 1 QAEPELDLR Unmodified 1069.5404 0.54038805 1113 P20810 CAST Calpastatin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.318 49.476 2 1.0365E-08 55612 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 161.02 139.56 894280000 0 0 0 50437000 41920000 41122000 56496000 64331000 43307000 64241000 109880000 143570000 63390000 70691000 144890000 40912 1113 36562 340864;340865;340866;340867;340868;340869;340870;340871;340872;340873;340874;340875 270424;270425;270426;270427;270428;270429;270430;270431;270432;270433;270434;270435;270436;270437 270429 14 QAEPVVVLDPVSTHEPQTK Unmodified 2073.0742 0.074234161 6 A0MZ66 KIAA1598 Shootin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 69.77 68.572 3 8.7744E-52 87890 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.55 104.84 951960000 7589300 805060000 4798700 9209400 7335500 8728600 10140000 7509600 8613200 11999000 18696000 15630000 7102000 8852200 20700000 40913 6 36563 340876;340877;340878;340879;340880;340881;340882;340883;340884;340885;340886;340887;340888;340889;340890;340891 270438;270439;270440;270441;270442;270443;270444;270445;270446;270447;270448;270449;270450;270451;270452;270453;270454;270455 270441 18 QAERPASYQSVSV Unmodified 1420.6947 0.69465686 4305 Q9GZT4 SRR Serine racemase yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 46.745 41.534 2 5.489E-08 54144 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.36 101.21 60974000 0 60974000 0 0 0 0 0 0 0 0 0 0 0 0 0 40914 4305 36564 340892;340893 270456 270456 1 QAESFEDLRR Unmodified 1249.6051 0.60511357 3465 Q8NI27 THOC2 THO complex subunit 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 36.08 36.319 3 0.021056 40157 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 35.541 22.752 168860000 0 0 0 9836600 0 16084000 11895000 20002000 9145700 13877000 17777000 19913000 16612000 14225000 19495000 40915 3465 36565 340894;340895;340896;340897;340898;340899;340900;340901;340902;340903;340904 270457;270458;270459 270459 2 QAETSRLQEELAK Unmodified 1501.7736 0.77363546 2689 Q4V328 GRIPAP1 GRIP1-associated protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 47.373 41.552 3 0.039056 52413 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 35.657 18.07 35505000 6425200 0 29080000 0 0 0 0 0 0 0 0 0 0 0 0 40916 2689 36566 340905;340906 270460 270460 0 QAEVANQETK Unmodified 1116.5411 0.54111633 798 P05114 HMGN1 Non-histone chromosomal protein HMG-14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 6 4 2 2 1 1 1 1 7.2641 5.719 2 5.877E-06 7856 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 144.5 60.745 74056000 34808000 30517000 0 0 0 0 0 0 0 0 0 0 0 3863800 4866200 40917 798 36567 340907;340908;340909;340910 270461;270462;270463;270464 270463 4 QAEVLAEFER Unmodified 1190.5932 0.5931519 303 O43172 PRPF4 U4/U6 small nuclear ribonucleoprotein Prp4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 67.152 67.264 2 0.0014272 76996 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 91.867 78.83 297420000 0 0 0 37428000 0 30775000 26363000 16845000 33913000 63724000 0 20422000 44583000 0 23369000 40918 303 36568 340911;340912;340913;340914;340915;340916;340917;340918;340919 270465;270466;270467;270468;270469;270470;270471 270467 7 QAFAPFGPIK Unmodified 1074.5862 0.58621603 4912 Q9UHX1 PUF60 Poly(U)-binding-splicing factor PUF60 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.992 76.053 2 0.0025533 87653 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 82.452 53.093 2108500000 0 0 0 102500000 112750000 143310000 131340000 157670000 100230000 199630000 197440000 237120000 175730000 185580000 365180000 40919 4912 36569 340920;340921;340922;340923;340924;340925;340926;340927;340928;340929;340930;340931 270472;270473;270474;270475;270476;270477;270478;270479;270480;270481;270482;270483;270484;270485 270472 14 QAFDDAIAELDTLNEDSYK Unmodified 2156.975 0.97497363 2109 Q04917 YWHAH 14-3-3 protein eta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 1 4 1 94.58 90.118 2;3 5.4657E-103 110509 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 199.38 191.08 242820000 4626500 232580000 5611400 0 0 0 0 0 0 0 0 0 0 0 0 40920 2109 36570 340932;340933;340934;340935;340936;340937 270486;270487;270488;270489;270490;270491 270486 6 QAFEQALEFHK Unmodified 1346.6619 0.66190017 2688 Q4LE39 ARID4B AT-rich interactive domain-containing protein 4B yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 6.8 3.92 2 3 1 1 1 1 1 63.623 61.136 3 0.014068 82865 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 37.144 21.28 43671000 20834000 0 6023500 4579500 0 0 5955700 6277700 0 0 0 0 0 0 0 40921 2688 36571 340938;340939;340940;340941;340942 270492;270493 270493 2 QAFEQIK Unmodified 862.45487 0.45486751 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 2 1 2 1 1 1 1 1 1 1 29.635 29.811 2 0.045927 32745 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 66.138 0 175220000 0 0 0 13607000 11683000 25217000 10608000 11853000 6618100 13513000 18154000 19859000 10196000 15316000 18598000 40922 2431 36572 340943;340944;340945;340946;340947;340948;340949;340950;340951;340952;340953;340954;340955;340956 270494;270495 270494 2 QAFERLEVK Unmodified 1118.6084 0.60840804 1209 P26639 TARS Threonine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 42.254 40.674 2 1.8092E-22 58460 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 203.64 114.27 547230000 476740000 0 17688000 0 0 0 0 0 0 0 12885000 7451500 0 9859700 22615000 40923 1209 36573 340957;340958;340959;340960;340961;340962 270496;270497;270498;270499;270500;270501 270498 4 QAFNAYK Unmodified 840.413 0.41300269 494;2902 O75400;Q6NWY9 PRPF40A;PRPF40B Pre-mRNA-processing factor 40 homolog A;Pre-mRNA-processing factor 40 homolog B no no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 22.982 23.175 2 0.024897 23788 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 81.864 41.761 618690000 0 0 0 34399000 35870000 32516000 57024000 35971000 46798000 63852000 73110000 82678000 0 69806000 86665000 40924 494;2902 36574 340963;340964;340965;340966;340967;340968;340969;340970;340971;340972;340973 270502;270503;270504;270505;270506 270506 5 QAFPNTNR Unmodified 946.46208 0.46207815 1211 P26641 EEF1G Elongation factor 1-gamma yes yes 0 0 0 By MS/MS 10 0 1 1 20.673 20.654 2 0.0063739 21311 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 101.41 36.188 277950000 0 0 0 0 0 277950000 0 0 0 0 0 0 0 0 0 40925 1211 36575 340974 270507;270508 270507 2 QAFSTAAALQSAK Unmodified 1292.6725 0.67246486 398 O60343 TBC1D4 TBC1 domain family member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.8 3.92 2 3 1 1 1 1 1 54.205 51.463 2 2.2168E-13 66283 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.1 102.73 189560000 48067000 110500000 0 0 6391200 0 0 10369000 0 0 0 14239000 0 0 0 40926 398 36576 340975;340976;340977;340978;340979 270509;270510;270511;270512;270513 270509 5 QAFTDVATGSLGQGLGAACGMAYTGK Oxidation (M) 2547.1734 0.17337263 1249 P29401 TKT Transketolase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 6.9 3.81 3 1 6 1 3 1 1 2 2 80.647 78.668 2;3 2.7346E-141 91659 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 180.32 175.85 1406400000 22162000 1192600000 0 0 0 0 0 0 0 0 36364000 6941500 0 27949000 120350000 40927 1249 36577 340980;340981;340982;340983;340984;340985;340986;340987;340988;340989 270514;270515;270516;270517;270518;270519;270520;270521 270517 1845 8 QAFTDVATGSLGQGLGAACGMAYTGK Unmodified 2531.1785 0.17845801 1249 P29401 TKT Transketolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 5.25 3.7 3 2 3 1 3 1 1 1 1 85.01 82.344 2;3 5.2937E-146 101876 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 184.53 174.28 1204300000 34174000 1109500000 14878000 0 0 0 0 0 0 0 7782000 0 0 6048300 31943000 40928 1249 36577 340990;340991;340992;340993;340994;340995;340996;340997 270522;270523;270524;270525;270526;270527;270528;270529;270530;270531 270523 10 QAGAEALSQAVAR Unmodified 1270.663 0.6629628 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.732 45.901 2 9.6948E-13 51457 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 131.82 103.42 440700000 0 0 0 31104000 26310000 40642000 30046000 28271000 16242000 43926000 35694000 58618000 36837000 46622000 46385000 40929 3641 36578 340998;340999;341000;341001;341002;341003;341004;341005;341006;341007;341008;341009 270532;270533;270534;270535;270536;270537;270538;270539;270540;270541;270542 270538 11 QAGDSSSHRQQGITDEK Unmodified 1842.8456 0.84563121 2137 Q07617 SPAG1 Sperm-associated antigen 1 yes yes 0 0 1 By MS/MS 2 0 1 1 7.6938 5.4666 3 0.019323 7542 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 33.301 25.789 3282800 0 0 3282800 0 0 0 0 0 0 0 0 0 0 0 0 40930 2137 36579 341010 270543 270543 1 QAGEVTFADAHRPK Unmodified 1525.7637 0.76373948 2259 Q13243 SRSF5 Serine/arginine-rich splicing factor 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 29.738 29.985 3 0.00063156 31669 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 49.482 43.319 171590000 0 0 0 0 11070000 10303000 16352000 11508000 0 12770000 20851000 11879000 26402000 22408000 28042000 40931 2259 36580 341011;341012;341013;341014;341015;341016;341017;341018;341019;341020 270544;270545;270546;270547;270548;270549;270550;270551;270552 270550 6 QAGEVTYADAHK Unmodified 1288.6048 0.60477922 2260;2149 Q08170;Q13247 SRSF4;SRSF6 Serine/arginine-rich splicing factor 4;Serine/arginine-rich splicing factor 6 no no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 2 1 1 2 1 1 1 1 1 1 16.929 17.092 2;3 0.0089722 17609 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 48.284 33.61 226160000 0 0 0 2216200 11693000 14380000 13334000 9075500 12635000 16175000 29851000 34368000 23150000 20242000 39039000 40932 2149;2260 36581 341021;341022;341023;341024;341025;341026;341027;341028;341029;341030;341031;341032;341033;341034 270553;270554;270555;270556;270557;270558;270559;270560 270553 3 QAGGFLGPPPPSGK Unmodified 1308.6826 0.68263561 5012 Q9UM00 TMCO1 Transmembrane and coiled-coil domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 51.794 51.71 2 0.030954 59049 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 35.594 35.594 17685000 0 0 0 0 3980800 0 5786900 0 0 0 0 0 0 7917500 0 40933 5012 36582 341035;341036;341037 270561 270561 1 QAGIGGEPAAAGAGCSPRPK Unmodified 1850.9057 0.90572904 2858 Q68DK7 MSL1 Male-specific lethal 1 homolog yes yes 0 0 1 By MS/MS 2 0 1 1 34.821 31.477 3 0.036359 39828 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 23.172 3.7826 3517000 0 0 3517000 0 0 0 0 0 0 0 0 0 0 0 0 40934 2858 36583 341038 270562 270562 1 QAGPAPAAATAASK Unmodified 1210.6306 0.63060004 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.942 20.145 2 2.1991E-05 20253 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 107.09 88.11 378990000 0 0 0 28609000 24302000 25681000 31271000 26376000 23003000 32800000 44059000 49886000 26760000 25019000 41228000 40935 4139 36584 341039;341040;341041;341042;341043;341044;341045;341046;341047;341048;341049;341050 270563;270564;270565;270566;270567;270568;270569;270570;270571;270572;270573 270571 11 QAGPASVPLRTEEEFK Unmodified 1757.8948 0.89481323 1270 P30101 PDIA3 Protein disulfide-isomerase A3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59.079 58.052 3 0.00090747 72272 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 50.079 45.37 1488500000 88095000 124920000 748070000 21078000 17290000 20044000 25358000 21616000 23125000 32503000 76076000 52215000 24261000 50456000 163400000 40936 1270 36585 341051;341052;341053;341054;341055;341056;341057;341058;341059;341060;341061;341062;341063;341064;341065 270574;270575;270576;270577;270578;270579;270580;270581 270576 8 QAGPASVPLRTEEEFKK Unmodified 1885.9898 0.98977625 1270 P30101 PDIA3 Protein disulfide-isomerase A3 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 2 1 1 57.487 51.667 3;4 0.00204 63881 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 51.591 41.215 824590000 585790000 38307000 200500000 0 0 0 0 0 0 0 0 0 0 0 0 40937 1270 36586 341066;341067;341068;341069 270582;270583;270584;270585 270585 4 QAGSLASLSDAPPLK Unmodified 1453.7777 0.77765821 680 O95684 FGFR1OP FGFR1 oncogene partner yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 71.24 70.425 2 0.00075463 88079 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.214 69.395 127740000 0 113200000 0 0 0 0 0 0 0 3236200 0 0 2594600 2837700 5875200 40938 680 36587 341070;341071;341072;341073;341074;341075;341076 270586;270587;270588;270589;270590;270591 270587 6 QAGVAIGR Unmodified 770.43989 0.43988615 3067 Q7RTV0 PHF5A PHD finger-like domain-containing protein 5A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 20.357 20.5 2 0.0075004 20807 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 89.427 43.076 156570000 0 0 0 0 24718000 0 21332000 15541000 14359000 0 37569000 0 0 43049000 0 40939 3067 36588 341077;341078;341079;341080;341081;341082 270592;270593;270594 270592 2 QAGVAIGRLCEK Unmodified 1300.6922 0.69215444 3067 Q7RTV0 PHF5A PHD finger-like domain-containing protein 5A yes yes 0 0 1 By MS/MS 2 0 1 1 49.342 41.516 3 0.01765 57475 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.712 22.238 15933000 15933000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40940 3067 36589 341083 270595 270595 1 QAGVFEPTIVK Unmodified 1187.655 0.65502388 1067 P17987 TCP1 T-complex protein 1 subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 66.181 64.851 2 0.00070352 79445 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 121.64 105.98 5915700000 101800000 4817400000 76575000 41714000 38447000 76040000 55616000 60556000 29912000 86657000 113870000 91581000 57900000 86775000 180870000 40941 1067 36590 341084;341085;341086;341087;341088;341089;341090;341091;341092;341093;341094;341095;341096;341097;341098;341099 270596;270597;270598;270599;270600;270601;270602;270603;270604;270605;270606;270607;270608;270609;270610 270602 8 QAGVIYLK Unmodified 890.52255 0.52255314 649 O95373 IPO7 Importin-7 yes yes 0 0 0 By MS/MS 10 0 1 1 48.102 48.159 2 0.038617 54329 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 50.966 25.967 22602000 0 0 0 0 0 22602000 0 0 0 0 0 0 0 0 0 40942 649 36591 341100 270611 270611 1 QAHFEEEEEEEEEG Unmodified 1719.6384 0.63838335 667 O95544 NADK NAD kinase yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 32.204 27.717 2 2.7635E-29 36311 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 147.41 147.41 17853000 0 17853000 0 0 0 0 0 0 0 0 0 0 0 0 0 40943 667 36592 341101;341102 270612 270612 1 QAHLTNQYMQR Oxidation (M) 1404.6568 0.65683157 958 P11940 PABPC1 Polyadenylate-binding protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 15.84 16.012 3 0.00040445 15796 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 72.848 60.221 209770000 0 0 0 15410000 9817600 18340000 18212000 0 0 21499000 27699000 27931000 25491000 19745000 25622000 40944 958 36593 341103;341104;341105;341106;341107;341108;341109;341110;341111;341112 270613;270614;270615;270616;270617;270618;270619;270620;270621;270622;270623 270621 1249 9 QAHLTNQYMQR Unmodified 1388.6619 0.66191694 958 P11940 PABPC1 Polyadenylate-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 2 1 1 2 2 1 2 2 1 1 2 2 27.345 27.553 2;3 2.6215E-21 28403 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 169.65 154.28 656010000 0 0 0 28202000 26544000 42565000 34760000 40223000 26390000 71791000 82060000 83038000 53845000 71712000 94879000 40945 958 36593 341113;341114;341115;341116;341117;341118;341119;341120;341121;341122;341123;341124;341125;341126;341127;341128;341129;341130;341131 270624;270625;270626;270627;270628;270629;270630;270631;270632;270633;270634;270635;270636;270637;270638 270628 11 QAHTMDPQLR Unmodified 1195.5768 0.57679033 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 22.896 23.16 3 0.0016975 23134 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.657 57.124 361010000 0 0 0 15000000 0 27460000 12171000 25480000 0 43145000 24759000 54844000 26463000 25682000 106010000 40946 1565 36594 341132;341133;341134;341135;341136;341137;341138;341139;341140;341141 270639;270640;270641;270642;270643;270644;270645;270646;270647 270642 8 QAHTMDPQLR Oxidation (M) 1211.5717 0.57170495 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 12.299 12.595 3 0.0074812 11205 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 44.318 22.232 129710000 0 0 0 0 0 0 0 0 5645300 32815000 18330000 29802000 12910000 0 30203000 40947 1565 36594 341142;341143;341144;341145;341146;341147 270648;270649 270649 2501 1 QAIEDELREHIEK Unmodified 1608.8107 0.81074925 2816 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 59.882 60.145 3 0.0089813 68504 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 41.48 28.067 82278000 0 0 0 0 0 12012000 0 9108500 7671700 0 0 11358000 8068200 8730500 25330000 40948 2816 36595 341148;341149;341150;341151;341152;341153;341154 270650;270651;270652;270653 270650 4 QAIEGVGNLR Unmodified 1055.5724 0.57235688 136 O00267 SUPT5H Transcription elongation factor SPT5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 44.618 44.995 2 0.0024367 49981 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 83.623 50.228 79102000 0 0 0 0 0 0 0 7159800 2993700 9911400 10568000 10242000 10883000 10516000 16828000 40949 136 36596 341155;341156;341157;341158;341159;341160;341161;341162;341163;341164 270654;270655;270656;270657;270658;270659;270660;270661;270662 270661 9 QAIELSPDNQYVK Unmodified 1503.7569 0.75692277 224 O14879 IFIT3 Interferon-induced protein with tetratricopeptide repeats 3 yes yes 0 0 0 By MS/MS 2 0 1 1 65.753 59.835 2 8.0557E-06 76563 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.3 63.578 15863000 0 15863000 0 0 0 0 0 0 0 0 0 0 0 0 0 40950 224 36597 341165 270663 270663 1 QAIGIALETR Unmodified 1070.6084 0.60840804 4011 Q99460 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.874 59.983 2 0.0014004 68106 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 91.584 55.25 224010000 0 0 0 12295000 17681000 22548000 5994800 6073900 5333800 36251000 37713000 52914000 5268500 7449700 14486000 40951 4011 36598 341166;341167;341168;341169;341170;341171;341172;341173;341174;341175;341176;341177 270664;270665;270666;270667;270668;270669;270670;270671 270669 8 QAILAAQR Unmodified 869.5083 0.50830006 438 O60869 EDF1 Endothelial differentiation-related factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 26.519 25.9 2 0.015549 26387 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 68.7 35.917 182260000 27294000 18090000 0 5781700 4134400 3889900 5515600 8246400 3429300 7889100 14699000 30394000 0 17007000 35890000 40952 438 36599 341178;341179;341180;341181;341182;341183;341184;341185;341186;341187;341188;341189;341190 270672;270673;270674;270675;270676;270677;270678;270679 270676 8 QAILAAQRRGEDVETSK Unmodified 1870.9861 0.98608786 438 O60869 EDF1 Endothelial differentiation-related factor 1 yes yes 0 0 2 By MS/MS 2 0 1 1 37.011 30.582 3 1.8594E-08 42445 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 103.13 74.119 63851000 63851000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40953 438 36600 341191 270680;270681;270682 270681 3 QAILESPEK Unmodified 1013.5393 0.53932542 4377 Q9H334 FOXP1 Forkhead box protein P1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 32.058 32.618 2 0.0098768 35604 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 65.465 46.69 19959000 0 0 0 0 0 0 0 0 0 0 4833000 4964200 4770300 0 5391400 40954 4377 36601 341192;341193;341194;341195;341196;341197 270683;270684;270685;270686;270687;270688 270686 6 QAILESPVSSCPPELANHPDAQHK Unmodified 2624.2653 0.26529918 4168 Q9BUQ8 DDX23 Probable ATP-dependent RNA helicase DDX23 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.59 1.65 1 16 1 1 2 2 2 2 1 1 1 1 1 2 64.262 63.98 3;4 1.4652E-05 73072 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 41.904 39.063 148080000 0 6073900 0 5770500 7722500 22342000 10477000 13826000 13719000 11860000 0 21431000 14859000 20000000 0 40955 4168 36602 341198;341199;341200;341201;341202;341203;341204;341205;341206;341207;341208;341209;341210;341211;341212;341213;341214 270689;270690;270691;270692;270693;270694;270695;270696;270697 270689 9 QAILETPDR Unmodified 1041.5455 0.54547343 3227 Q8IVH2 FOXP4 Forkhead box protein P4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.169 38.348 2 0.009035 42275 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 67.897 46.047 92465000 0 0 0 5724900 5215900 7974200 6765300 7544300 5418200 11905000 7458100 8643500 6534500 7919100 11362000 40956 3227 36603 341215;341216;341217;341218;341219;341220;341221;341222;341223;341224;341225;341226 270698;270699;270700;270701;270702;270703;270704;270705;270706 270703 9 QAILQAWK Unmodified 956.54435 0.54435122 500 O75448 MED24 Mediator of RNA polymerase II transcription subunit 24 yes yes 0 0 0 By MS/MS 10 0 1 1 24.209 24.889 2 0.046931 25892 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.975 33.197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40957 500 36604 341227 270707 270707 1 QAIPIGLQNR Unmodified 1108.6353 0.63529149 4168 Q9BUQ8 DDX23 Probable ATP-dependent RNA helicase DDX23 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.639 56.762 2 0.012262 64545 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 52.786 7.4505 177370000 0 0 0 11081000 10071000 13342000 12687000 18715000 12104000 17135000 15828000 19191000 14005000 15559000 17653000 40958 4168 36605 341228;341229;341230;341231;341232;341233;341234;341235;341236;341237;341238;341239 270708;270709;270710 270708 1 QAIPLDENEGIYVQDVK Unmodified 1929.9684 0.96837211 2444 Q14764 MVP Major vault protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.899 76.959 2 2.2854E-28 88495 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 141.38 127.98 93902000 0 0 0 4660600 4145000 6828000 6452700 8772600 5041200 6866000 9731800 8744800 6731600 10710000 15218000 40959 2444 36606 341240;341241;341242;341243;341244;341245;341246;341247;341248;341249;341250;341251 270711;270712;270713;270714;270715;270716;270717;270718;270719;270720;270721;270722 270714 12 QAIQEELNK Unmodified 1071.556 0.55603812 2809 Q5VT25 CDC42BPA Serine/threonine-protein kinase MRCK alpha yes yes 0 0 0 By MS/MS 2 0 1 1 33.177 28.534 2 0.034646 37341 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 63.961 21.362 9848100 0 9848100 0 0 0 0 0 0 0 0 0 0 0 0 0 40960 2809 36607 341252 270723 270723 1 QAITLNESTGPLLR Unmodified 1511.8308 0.83075641 4301 Q9GZR1 SENP6 Sentrin-specific protease 6 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 10 0 8 1 1 1 1 1 1 1 1 75.08 75.063 2 0.00055428 86633 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 67.153 50.128 20347000 0 0 0 985410 1637800 2952700 2059700 2667000 0 3913400 3414700 0 2716400 0 0 40961 4301 36608 341253;341254;341255;341256;341257;341258;341259;341260 270724;270725 270724 1 QALAEQLK Unmodified 899.50763 0.50763136 596 O94874 UFL1 E3 UFM1-protein ligase 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 29.616 29.968 2 0.028761 32521 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 56.547 5.1167 42596000 0 0 0 0 0 15096000 0 0 0 0 0 27500000 0 0 0 40962 596 36609 341261;341262 270726;270727 270726 2 QALANANQDK Unmodified 1071.5309 0.530886 2867 Q6BDS2 UHRF1BP1 UHRF1-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 8.2117 8.3242 2 0.001703 6051 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 103.19 73.776 52177000 0 0 0 3275000 3852600 3351800 5159000 6132500 4106300 4417400 10548000 0 6090800 0 5243000 40963 2867 36610 341263;341264;341265;341266;341267;341268;341269;341270;341271;341272 270728;270729 270728 2 QALAQISLPR Unmodified 1095.64 0.64004252 802 P05164 MPO Myeloperoxidase;Myeloperoxidase;89 kDa myeloperoxidase;84 kDa myeloperoxidase;Myeloperoxidase light chain;Myeloperoxidase heavy chain yes yes 0 0 0 By MS/MS 10 0 1 1 69.036 69.158 2 0.010746 79747 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 55.461 38.076 2137400 0 0 0 0 0 0 0 0 0 0 0 0 2137400 0 0 40964 802 36611 341273 270730 270730 1 QALAVVAEQEREDR Unmodified 1612.8169 0.81689726 2092 Q03169 TNFAIP2 Tumor necrosis factor alpha-induced protein 2 yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 42.423 42.661 3 0.0072801 47789 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 31.389 19.244 54928000 0 0 0 0 2505800 3747300 4589400 2470100 3276100 6953200 8564900 7344900 5350800 0 10126000 40965 2092 36612 341274;341275;341276;341277;341278;341279;341280;341281;341282;341283 270731;270732;270733 270731 3 QALAWMVSR Unmodified 1060.5488 0.54878467 2411 Q14527 HLTF Helicase-like transcription factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.95 70.991 2 0.0063245 81408 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 75.378 33.93 224840000 0 0 0 11504000 10977000 20469000 14103000 19787000 15935000 21696000 32241000 35382000 22771000 19978000 0 40966 2411 36613 341284;341285;341286;341287;341288;341289;341290;341291;341292;341293;341294;341295 270734;270735;270736;270737;270738;270739;270740;270741;270742;270743;270744;270745 270740 12 QALAYLEQSYK Unmodified 1312.6663 0.66631685 3311 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 64.354 64.438 2 0.00043138 73770 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 85.533 62.179 84183000 0 0 0 3297200 5101200 6284400 7569300 8013100 0 8802300 7963800 8870600 7165500 6050300 15065000 40967 3311 36614 341296;341297;341298;341299;341300;341301;341302;341303;341304;341305;341306 270746;270747;270748;270749;270750;270751;270752;270753;270754;270755;270756 270747 9 QALCPGSTR Unmodified 988.47601 0.47601366 3693 Q92974 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.567 15.737 2 0.00355 15439 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 89.698 46.698 170060000 0 0 0 5891600 11040000 10001000 11698000 15658000 5420600 15725000 17977000 16592000 14791000 18936000 26330000 40968 3693 36615 341307;341308;341309;341310;341311;341312;341313;341314;341315;341316;341317;341318 270757;270758;270759;270760;270761;270762;270763;270764;270765 270762 8 QALEALPQLSSGADK Unmodified 1526.794 0.79403656 3909 Q96KP1 EXOC2 Exocyst complex component 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 69.967 69.473 2 3.3927E-17 87352 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.03 92.552 54991000 0 30965000 0 1384100 1364400 3002300 1781300 2088200 0 4039700 2855700 0 0 3199400 4310400 40969 3909 36616 341319;341320;341321;341322;341323;341324;341325;341326;341327;341328 270766;270767 270767 2 QALEASNR Unmodified 887.44609 0.44609374 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 8.0329 8.1024 2 0.033014 6433 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 53.968 13.7 63097000 0 0 0 8933000 4879400 6094600 6320000 20165000 4808600 2260400 0 5130400 4505700 0 0 40970 1029 36617 341329;341330;341331;341332;341333;341334;341335;341336;341337 270768;270769 270769 1 QALEASNRIQESK Unmodified 1472.7583 0.75831975 1029 P15924 DSP Desmoplakin yes yes 0 0 1 By matching By MS/MS By matching By matching By MS/MS 6.8 3.92 2 3 1 1 1 1 1 24.305 22.861 3 0.015076 29354 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 45.115 36.072 32252000 2204100 0 13985000 0 0 0 0 0 554350 0 2697300 12811000 0 0 0 40971 1029 36618 341338;341339;341340;341341;341342 270770;270771 270770 1 QALEDLEK Unmodified 944.48148 0.48147619 4321;2143 Q9H0B6;Q07866 KLC2;KLC1 Kinesin light chain 2;Kinesin light chain 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.069 35.25 2 0.0071421 38691 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 90.657 26.089 297270000 0 0 0 23081000 22415000 25818000 23585000 19699000 17348000 28692000 29652000 26983000 26618000 19846000 33531000 40972 4321;2143 36619 341343;341344;341345;341346;341347;341348;341349;341350;341351;341352;341353;341354 270772;270773;270774;270775;270776;270777;270778;270779;270780;270781;270782;270783 270773 12 QALEGLGDLK Unmodified 1042.5659 0.56587452 961 P12081;P49590 HARS;HARS2 Histidine--tRNA ligase, cytoplasmic;Probable histidine--tRNA ligase, mitochondrial yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 3 6 1 1 1 1 1 1 1 1 1 62.362 60.196 2 0.0014511 77246 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.88 52.067 618170000 15964000 484050000 6009700 12742000 0 0 0 16403000 0 0 28146000 0 0 19443000 35414000 40973 961 36620 341355;341356;341357;341358;341359;341360;341361;341362;341363 270784;270785;270786;270787;270788;270789;270790 270784 6 QALEIRSSLSEK Unmodified 1359.7358 0.73579339 4869 Q9UDY8 MALT1 Mucosa-associated lymphoid tissue lymphoma translocation protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 52.387 44.373 3 0.016577 61308 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.314 33.642 43067000 43067000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40974 4869 36621 341364 270791 270791 0 QALEQYEEVK Unmodified 1235.6034 0.60338224 4890 Q9UH65 SWAP70 Switch-associated protein 70 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 45.26 40.182 2 9.8261E-06 52180 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.5 101.69 120690000 0 120690000 0 0 0 0 0 0 0 0 0 0 0 0 0 40975 4890 36622 341365;341366 270792;270793 270793 2 QALEQYEEVKK Unmodified 1363.6983 0.69834526 4890 Q9UH65 SWAP70 Switch-associated protein 70 yes yes 0 0 1 By matching By MS/MS 2.33 0.471 2 1 1 2 37.99 32.631 3 0.010041 40541 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 59.418 38.63 31444000 1942100 29502000 0 0 0 0 0 0 0 0 0 0 0 0 0 40976 4890 36623 341367;341368;341369 270794;270795 270795 0 QALETVNDYNPLMK Oxidation (M) 1650.7923 0.792322 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 68.483 68.627 2 1.1103E-12 79321 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 104.79 97.415 103190000 0 0 0 0 7729200 11345000 11810000 7598800 0 12031000 8879700 13601000 10403000 10142000 9650700 40977 2392 36624 341370;341371;341372;341373;341374;341375;341376;341377;341378;341379 270796;270797;270798;270799;270800;270801;270802;270803;270804;270805;270806 270806 3916 11 QALETVNDYNPLMK Unmodified 1634.7974 0.79740737 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 75.604 75.255 2 1.2898E-29 92992 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 176.95 167.26 612350000 0 529380000 0 3115100 5398900 7129500 0 7190200 3643600 8040600 9409200 7763200 5016200 7799200 18466000 40978 2392 36624 341380;341381;341382;341383;341384;341385;341386;341387;341388;341389;341390;341391 270807;270808;270809;270810;270811;270812;270813;270814;270815;270816;270817 270809 11 QALLAELEEQK Unmodified 1270.6769 0.67688153 4316 Q9H081 MIS12 Protein MIS12 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 74.99 74.403 2 0.0053144 93554 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.772 55.996 64312000 0 32647000 1300600 0 1963700 2493600 0 0 2654200 4903400 3729400 4488600 3265800 2742600 4123300 40979 4316 36625 341392;341393;341394;341395;341396;341397;341398;341399;341400;341401;341402 270818;270819;270820;270821;270822 270820 5 QALLDSEGNADIDQVDNLQEGPSK Unmodified 2555.1987 0.19871899 5074 Q9UQR1 ZNF148 Zinc finger protein 148 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 2 1 2 2 1 2 1 1 1 1 1 74.891 74.94 2;3 2.875E-79 86092 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 143.91 131.97 155790000 0 0 0 6810800 15037000 19729000 10492000 9679200 10407000 20087000 14188000 15611000 8213600 7904400 17630000 40980 5074 36626 341403;341404;341405;341406;341407;341408;341409;341410;341411;341412;341413;341414;341415;341416;341417;341418 270823;270824;270825;270826;270827;270828;270829;270830;270831;270832;270833;270834;270835 270826 13 QALLEAVAGK Unmodified 998.57605 0.57604528 3565 Q8WVT3 TRAPPC12 Trafficking protein particle complex subunit 12 yes yes 0 0 0 By MS/MS 2 0 1 1 64.841 58.924 2 0.014615 75402 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.375 31.199 29028000 0 29028000 0 0 0 0 0 0 0 0 0 0 0 0 0 40981 3565 36627 341419 270836 270836 1 QALLNEHGAAQEQLNK Unmodified 1762.8962 0.89621022 478 O75330 HMMR Hyaluronan mediated motility receptor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.124 39.304 3 0.0022758 43463 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 44.567 33.305 85481000 0 0 0 5217400 4969900 7859600 6899900 5624100 4116600 9249400 7307000 8168700 8969600 4833200 12266000 40982 478 36628 341420;341421;341422;341423;341424;341425;341426;341427;341428;341429;341430;341431 270837;270838;270839;270840 270838 4 QALLQYK Unmodified 862.49125 0.49125301 2080 Q02790 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 45.791 40.381 2 0.033025 52880 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.121 44.027 2337000000 705050000 1591200000 40804000 0 0 0 0 0 0 0 0 0 0 0 0 40983 2080 36629 341432;341433;341434;341435 270841;270842;270843 270842 3 QALMPTLEALYR Oxidation (M) 1420.7384 0.73843593 3662;2171 Q09472;Q92793 EP300;CREBBP Histone acetyltransferase p300;CREB-binding protein no no 0 1 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 79.104 79.12 2 0.0084911 91333 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 44.318 18.932 33486000 0 0 0 5379300 3020500 3712700 2301600 3471300 0 3365600 0 0 3489200 3669200 5076400 40984 2171;3662 36630 341436;341437;341438;341439;341440;341441;341442;341443;341444 270844 270844 3496 1 QALMPVILQDAPSAPGHAPHR Oxidation (M) 2221.1426 0.14260527 4273 Q9BZL6 PRKD2 Serine/threonine-protein kinase D2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 65.186 65.269 4 8.7167E-05 74494 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 47.688 42.358 50080000 0 0 0 6495400 0 0 0 0 0 9730300 11639000 15565000 0 6650600 0 40985 4273 36631 341445;341446;341447;341448;341449 270845;270846;270847;270848 270848 5732 4 QALNTDYLDSDYQR Unmodified 1700.7642 0.76419299 605 O94919 ENDOD1 Endonuclease domain-containing 1 protein yes yes 0 0 0 By MS/MS 10 0 1 1 61.693 61.002 2 1.6055E-12 70475 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 123.8 108.6 3081300 0 0 0 3081300 0 0 0 0 0 0 0 0 0 0 0 40986 605 36632 341450 270849 270849 1 QALPCVAESPTVHVEVHQR Unmodified 2156.0797 0.079670665 2557 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.48 3.14 4 17 2 2 2 1 2 1 2 2 2 1 2 2 61.042 60.25 3;4 8.2615E-36 81195 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 122.57 114.38 489110000 138120000 0 7102700 0 0 39572000 17152000 21195000 15863000 42665000 36816000 42576000 22391000 33607000 72059000 40987 2557 36633 341451;341452;341453;341454;341455;341456;341457;341458;341459;341460;341461;341462;341463;341464;341465;341466;341467;341468;341469;341470;341471 270850;270851;270852;270853;270854;270855;270856;270857;270858;270859;270860;270861;270862;270863;270864;270865;270866;270867;270868;270869;270870;270871;270872;270873;270874;270875 270862 22 QALPCVAESPTVHVEVHQRGSSTAK Unmodified 2687.3449 0.34494649 2557 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog yes yes 0 0 1 By MS/MS 2 0 3 3 63.714 55.443 4;5 1.2808E-12 74103 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.21 66.494 177930000 177930000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40988 2557 36634 341472;341473;341474 270876;270877;270878 270876 2 QALQDLLSEYMNNAGK Unmodified 1793.8618 0.86179854 4922 Q9UI47 CTNNA3 Catenin alpha-3 yes yes 0 0 0 By MS/MS 10 0 1 1 29.647 30.115 4 0.041248 32126 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 13.791 3.7188 42414000 0 0 0 0 0 0 0 0 0 0 42414000 0 0 0 0 40989 4922 36635 341475 270879 270879 1 QALQDTLALYK Unmodified 1262.6871 0.68705229 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.42 3.66 3 1 8 1 2 1 1 1 1 1 1 1 1 1 73.811 72.265 2 0.00030791 83474 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 94.692 52.404 281450000 6101200 181350000 2403500 0 7188500 20038000 8202300 6011100 4268800 11898000 17687000 16296000 0 0 0 40990 2047 36636 341476;341477;341478;341479;341480;341481;341482;341483;341484;341485;341486;341487 270880;270881;270882;270883;270884;270885;270886;270887;270888;270889;270890;270891 270880 10 QALQNELER Unmodified 1099.5622 0.56218613 5191 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 35.8 35.987 2 0.0063245 39639 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 75.378 28.296 48042000 0 0 0 2985000 3788400 4998900 3445300 2400300 0 3763800 6091400 8121300 3996900 3889200 4562000 40991 5191 36637 341488;341489;341490;341491;341492;341493;341494;341495;341496;341497;341498 270892;270893;270894;270895;270896;270897;270898;270899;270900 270893 9 QALQSTPLGSSSK Unmodified 1302.6779 0.67794416 242 O15027 SEC16A Protein transport protein Sec16A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.145 34.328 2 1.0809E-15 36490 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 147.62 110.15 187210000 0 0 0 11597000 12034000 12846000 15238000 11890000 10331000 15365000 19289000 23817000 15418000 15140000 24244000 40992 242 36638 341499;341500;341501;341502;341503;341504;341505;341506;341507;341508;341509;341510 270901;270902;270903;270904;270905;270906;270907;270908;270909;270910;270911;270912 270904 12 QALQTDPAAVK Unmodified 1140.6139 0.61388734 2295 Q13459 MYO9B Unconventional myosin-IXb yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.404 32.59 2 0.0026818 35599 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 66.568 32.382 39127000 0 0 0 3117800 2780400 3885800 2428700 2529100 1831000 3530000 3784900 4714000 4648200 2722000 3154800 40993 2295 36639 341511;341512;341513;341514;341515;341516;341517;341518;341519;341520;341521;341522 270913;270914;270915;270916;270917;270918;270919;270920;270921;270922 270919 10 QALSALEEAGAPAPGRPSPATAAVPSSQPK Unmodified 2855.4777 0.4777348 3271 Q8IY33 MICALL2 MICAL-like protein 2 yes yes 0 0 1 By MS/MS 10 0 1 1 70.626 70 3 0.033879 81192 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 16.601 13.823 2126700 0 0 0 2126700 0 0 0 0 0 0 0 0 0 0 0 40994 3271 36640 341523 270923 270923 1 QALSGFGYR Unmodified 997.49813 0.49812931 480 O75340 PDCD6 Programmed cell death protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 49.357 49.515 2 0.0030065 55874 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 91.516 64.554 181750000 0 0 0 12177000 9903300 16711000 10197000 16946000 0 19434000 18452000 23025000 19130000 10735000 25036000 40995 480 36641 341524;341525;341526;341527;341528;341529;341530;341531;341532;341533;341534 270924;270925;270926;270927;270928;270929;270930;270931;270932;270933 270930 10 QALVEFENIDSAK Unmodified 1462.7304 0.73037367 3567 Q8WVV9 HNRNPLL Heterogeneous nuclear ribonucleoprotein L-like yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 72.76 72.754 2 0.00071708 84166 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 88.596 73.917 10932000 0 0 0 0 4446100 0 2733200 0 0 0 3752500 0 0 0 0 40996 3567 36642 341535;341536;341537 270934;270935 270935 2 QALYEYAR Unmodified 1012.4978 0.49779495 5268 Q9Y679 AUP1 Ancient ubiquitous protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 41.416 41.655 2 0.011386 46178 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 77.046 58.316 125960000 0 0 0 9334700 0 11001000 12991000 7084100 10284000 11528000 14807000 17318000 13312000 8915200 9385700 40997 5268 36643 341538;341539;341540;341541;341542;341543;341544;341545;341546;341547;341548 270936;270937;270938;270939;270940 270939 5 QAMAILTPAVPAR Oxidation (M) 1353.7439 0.74385566 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 61.431 61.632 2 0.00083214 70171 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.103 45.791 26625000 0 0 0 0 3282300 0 0 2848700 0 3795000 3291100 4994900 4174700 0 4238400 40998 5189 36644 341549;341550;341551;341552;341553;341554;341555;341556 270941;270942;270943;270944;270945 270944 6585 5 QAMAILTPAVPAR Unmodified 1337.7489 0.74894104 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 74.822 74.882 2 0.0024508 86531 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 58.592 47.763 11811000 0 0 0 0 2122100 0 2124100 4310600 0 0 0 3254000 0 0 0 40999 5189 36644 341557;341558;341559;341560 270946;270947;270948 270948 2 QAMEMVGFLPATK Unmodified 1421.7047 0.70469296 2295 Q13459 MYO9B Unconventional myosin-IXb yes yes 0 0 0 By MS/MS 2 0 1 1 87.06 82.251 2 0.00010118 102185 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.215 86.259 20255000 0 20255000 0 0 0 0 0 0 0 0 0 0 0 0 0 41000 2295 36645 341561 270949 270949 1 QAMLENASDIK Oxidation (M) 1234.5864 0.58635197 3421 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 13 1 1 2 1 1 2 2 2 1 31.356 31.518 2 0.00028762 33475 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 85.355 58.971 86012000 0 0 0 3831300 3851900 18134000 6213700 4054900 9960700 11882000 0 19492000 0 0 8590400 41001 3421 36646 341562;341563;341564;341565;341566;341567;341568;341569;341570;341571;341572;341573;341574 270950;270951;270952;270953;270954;270955;270956;270957;270958;270959 270956 4968 7 QAMLENASDIK Unmodified 1218.5914 0.59143734 3421 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 43.703 43.336 2 3.9563E-05 55449 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 135.55 114.6 162870000 0 46483000 0 10467000 5725300 9553500 6859600 9045100 0 12360000 17433000 17314000 0 10819000 16814000 41002 3421 36646 341575;341576;341577;341578;341579;341580;341581;341582;341583;341584;341585;341586;341587 270960;270961;270962;270963;270964;270965;270966;270967;270968;270969;270970;270971;270972 270963 11 QAMQGMPVR Unmodified 1016.4896 0.48955523 4140 Q9BTC8 MTA3 Metastasis-associated protein MTA3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 33.824 34.155 2 0.0054582 37583 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 77.674 59.35 31925000 0 0 0 0 0 3419100 0 0 0 5369700 7082600 0 6609800 4283200 5160900 41003 4140 36647 341588;341589;341590;341591;341592;341593 270973;270974;270975;270976;270977 270977 5 QAMQGMPVR Oxidation (M) 1032.4845 0.48446985 4140 Q9BTC8 MTA3 Metastasis-associated protein MTA3 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 20.164 20.273 2 0.01343 20983 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 53.166 31.62 13956000 0 0 0 1798900 1690200 0 1515300 1494100 1196100 3421200 1795200 0 0 1044600 0 41004 4140 36647 341594;341595;341596;341597;341598;341599;341600;341601 270978 270978 5635 1 QANDLVSTLMK Unmodified 1218.6278 0.62782285 2215 Q12965 MYO1E Unconventional myosin-Ie yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 75.242 75.168 2 0.040932 86583 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 36.684 17.59 16049000 0 0 0 1849800 2665100 3940400 2228700 2419000 0 2946000 0 0 0 0 0 41005 2215 36648 341602;341603;341604;341605;341606;341607 270979;270980 270980 2 QANDLVSTLMK Oxidation (M) 1234.6227 0.62273747 2215 Q12965 MYO1E Unconventional myosin-Ie yes yes 0 1 0 By MS/MS 2 0 1 1 59.135 53.292 2 0.029327 68522 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 51.762 36.897 77230000 0 77230000 0 0 0 0 0 0 0 0 0 0 0 0 0 41006 2215 36648 341608 270981 270981 1 QAPAPTVIRDPPSITPAVK Unmodified 1957.0997 0.09966105 2235 Q13112 CHAF1B Chromatin assembly factor 1 subunit B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.537 69.612 3 0.00044818 79924 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 49.224 47.069 186760000 0 0 0 10797000 10197000 11891000 11566000 9165600 11746000 16985000 22176000 23188000 14777000 15878000 28395000 41007 2235 36649 341609;341610;341611;341612;341613;341614;341615;341616;341617;341618;341619;341620 270982;270983;270984;270985;270986;270987;270988;270989;270990;270991 270982 7 QAPDIGDLGTVNLFK Unmodified 1586.8304 0.83042206 4664 Q9NVC6 MED17 Mediator of RNA polymerase II transcription subunit 17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 88.323 88.013 2 0.00046797 109095 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.46 62.594 65470000 0 38316000 0 0 1721100 2087100 1334800 2066400 2081500 2934500 2602500 2887000 1270600 2141500 6026800 41008 4664 36650 341621;341622;341623;341624;341625;341626;341627;341628;341629;341630;341631;341632 270992;270993;270994;270995;270996;270997 270993 6 QAPDNEITIK Unmodified 1127.5823 0.58225287 4718 Q9NX58 LYAR Cell growth-regulating nucleolar protein yes yes 0 0 0 By MS/MS 10 0 1 1 38.341 37.871 2 0.045692 42333 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 38.276 22.073 3593200 0 0 0 0 3593200 0 0 0 0 0 0 0 0 0 0 41009 4718 36651 341633 270998 270998 1 QAPELSLSSQDLELVTK Unmodified 1856.9731 0.97312313 138 O00273 DFFA DNA fragmentation factor subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 5 3.56 2 2 2 4 1 1 86.677 84.039 2;3 2.4769E-72 104045 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 177.93 160.9 223140000 0 212950000 0 0 0 0 0 0 0 0 0 0 0 2559900 7633000 41010 138 36652 341634;341635;341636;341637;341638;341639 270999;271000;271001;271002;271003 270999 4 QAPGPARDYSQYYR Unmodified 1670.7801 0.78011783 84 CON__Q04695;Q04695 KRT17 Keratin, type I cytoskeletal 17 yes no 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 43.498 43.394 3 0.0012392 49283 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 50.843 47.339 + 26466000 0 0 0 13347000 0 0 6405500 6713100 0 0 0 0 0 0 0 41011 84 36653 341640;341641;341642 271004 271004 1 QAPLSQSDITILTPK Unmodified 1610.8879 0.88793694 1406 P39880 CUX1 Homeobox protein cut-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 79.206 78.683 2 5.1795E-07 90927 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 110.08 103.42 403030000 0 124090000 0 16905000 20242000 22724000 20196000 19562000 22597000 27141000 22504000 30873000 21084000 21656000 33457000 41012 1406 36654 341643;341644;341645;341646;341647;341648;341649;341650;341651;341652;341653;341654;341655;341656 271005;271006;271007;271008;271009;271010;271011;271012;271013;271014;271015;271016;271017;271018 271006 14 QAPQPQSSLQR Unmodified 1238.6367 0.63674805 3594 Q8WXI9 GATAD2B Transcriptional repressor p66-beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.568 22.773 2 0.00029439 23228 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 103.26 83.469 277910000 0 0 0 17336000 14579000 16670000 20043000 21045000 11879000 27794000 22511000 39786000 27911000 29362000 28990000 41013 3594 36655 341657;341658;341659;341660;341661;341662;341663;341664;341665;341666;341667;341668 271019;271020;271021;271022;271023;271024;271025;271026;271027;271028;271029;271030 271023 11 QAPSAPETGGAGASEAPAPTGGEDGAGAETTPVAEPTK Unmodified 3433.5757 0.5757301 239 O15013 ARHGEF10 Rho guanine nucleotide exchange factor 10 yes yes 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By matching 10 0 8 1 1 1 1 1 1 1 1 55.615 55.652 3 0.033676 63367 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 12.234 10.229 27174000 0 0 0 2637400 2808700 3454200 3855600 0 2719300 4012400 2644800 5042000 0 0 0 41014 239 36656 341669;341670;341671;341672;341673;341674;341675;341676 271031 271031 1 QAPTWPSK Unmodified 913.46577 0.46576654 1160 P23490 LOR Loricrin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 32.353 32.489 2 0.035464 35358 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 52.482 36.846 152230000 0 0 0 63656000 7689900 11901000 12450000 0 5092400 9007800 9685300 0 21837000 5336200 5571500 41015 1160 36657 341677;341678;341679;341680;341681;341682;341683;341684;341685;341686 271032 271032 1 QAQAAVLAVLPR Unmodified 1235.735 0.73500553 4066 Q99848 EBNA1BP2 Probable rRNA-processing protein EBP2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 77.805 77.842 2 0.00019684 89916 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 103.55 79.778 43351000 0 0 0 2120000 2775400 0 2741500 0 0 4928700 5300000 7307100 6232000 3799800 8147100 41016 4066 36658 341687;341688;341689;341690;341691;341692;341693;341694;341695 271033;271034;271035;271036 271036 4 QAQARVLSHQDDTALLK Unmodified 1893.0068 0.0068232975 3704 Q93034 CUL5 Cullin-5 yes yes 0 0 1 By MS/MS 2 0 1 1 54.801 46.692 3 0.013456 63871 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.05 35.186 17767000 17767000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41017 3704 36659 341696 271037 271037 1 QAQENLHDQVQEQK Unmodified 1693.802 0.80197548 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 0 By MS/MS By MS/MS 2.4 0.49 3 2 1 4 20.703 16.745 2;3 5.1153E-12 22271 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 155.99 113.64 177220000 3860600 173360000 0 0 0 0 0 0 0 0 0 0 0 0 0 41018 2495 36660 341697;341698;341699;341700;341701 271038;271039;271040;271041;271042 271040 4 QAQEYEALLNIK Unmodified 1418.7405 0.74054442 814 P05783 KRT18 Keratin, type I cytoskeletal 18 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 2 1 2 2 78.222 78.282 2;3 1.8172E-158 90205 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 231.23 205.67 2653100000 0 0 0 98511000 182240000 154100000 137900000 256070000 111100000 414550000 224440000 313740000 160130000 197000000 403340000 41019 814 36661 341702;341703;341704;341705;341706;341707;341708;341709;341710;341711;341712;341713;341714;341715;341716;341717;341718;341719;341720;341721;341722;341723;341724 271043;271044;271045;271046;271047;271048;271049;271050;271051;271052;271053;271054;271055;271056;271057 271046 11 QAQIEVVPSASALIIK Unmodified 1665.9665 0.96652161 1266 P30050 RPL12 60S ribosomal protein L12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 2 1 1 2 1 2 2 2 2 2 2 85.192 85.27 2;3 3.1877E-10 97868 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 122.34 116.37 491480000 0 0 0 9372200 37342000 26227000 23157000 32048000 13605000 63364000 51768000 60807000 41343000 47237000 85210000 41020 1266 36662 341725;341726;341727;341728;341729;341730;341731;341732;341733;341734;341735;341736;341737;341738;341739;341740;341741;341742;341743;341744 271058;271059;271060;271061;271062;271063;271064;271065;271066;271067;271068;271069;271070;271071;271072;271073 271069 16 QAQILASEAEK Unmodified 1186.6194 0.61936665 4951 Q9UJZ1 STOML2 Stomatin-like protein 2, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 32.426 32.618 2 0.00093347 35438 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 76.228 52.46 11205000 0 0 0 0 1428700 0 1411700 0 0 3339700 2745600 0 0 0 2278900 41021 4951 36663 341745;341746;341747;341748;341749 271074;271075 271075 2 QAQIPLAAVIK Unmodified 1150.7074 0.7073938 593 O94855 SEC24D Protein transport protein Sec24D yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 84.354 80.357 2 0.004711 99971 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.25 40.663 83628000 0 83628000 0 0 0 0 0 0 0 0 0 0 0 0 0 41022 593 36664 341750;341751 271076 271076 1 QAQIVVK Unmodified 784.48069 0.48068833 3927 Q96MW1 CCDC43 Coiled-coil domain-containing protein 43 yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 25.24 20.822 2 0.033071 27171 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.086 43.086 151250000 392120 150860000 0 0 0 0 0 0 0 0 0 0 0 0 0 41023 3927 36665 341752;341753 271077 271077 1 QAQLAQTLQQQEQASQGLR Unmodified 2125.0876 0.087592814 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 64.961 65.207 2 1.8378E-17 74655 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 120.14 104.25 22047000 0 0 0 0 0 2061500 2847900 0 1294400 2208800 4026400 3978900 0 0 5628900 41024 2459 36666 341754;341755;341756;341757;341758;341759;341760 271078 271078 1 QAQPSCAPASRPPAK Unmodified 1564.778 0.77800934 2989 Q6W2J9 BCOR BCL-6 corepressor yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 14.684 14.83 3 0.0015381 14132 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 48.214 38.093 63482000 0 0 0 7366800 4459200 8715100 0 4034800 5720000 6978100 9051400 0 6049700 0 11107000 41025 2989 36667 341761;341762;341763;341764;341765;341766;341767;341768;341769 271079;271080 271080 2 QAQQERDELADEIANSSGK Unmodified 2087.972 0.97195393 1356 P35579 MYH9 Myosin-9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 49.272 49.422 3 2.4499E-50 55907 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 142.3 120.76 290310000 0 0 0 30436000 26819000 26964000 19632000 0 0 28557000 31721000 60096000 24796000 0 41284000 41026 1356 36668 341770;341771;341772;341773;341774;341775;341776;341777;341778 271081;271082;271083;271084;271085;271086;271087;271088;271089;271090;271091;271092;271093;271094;271095 271087 14 QAQQQQQQQQGSRPPGLSK Unmodified 2121.0675 0.067526074 3241 Q8IWI9 MGA MAX gene-associated protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 18.123 18.176 3 0.012913 18639 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 28.869 25.208 14581000 0 0 0 0 2052800 3092300 2075600 0 1672800 3067000 0 0 2620100 0 0 41027 3241 36669 341779;341780;341781;341782;341783;341784 271096 271096 1 QAQREDALELTEK Unmodified 1529.7686 0.76855009 1970 P78316 NOP14 Nucleolar protein 14 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 37.176 37.316 3 0.0012689 41230 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 61.212 45.825 89430000 0 0 0 0 17037000 0 0 0 14393000 23249000 0 34750000 0 0 0 41028 1970 36670 341785;341786;341787;341788;341789;341790 271097;271098;271099;271100;271101;271102 271099 6 QAQTQTSPEHLVLQQK Unmodified 1834.9537 0.95372509 5007 Q9ULV3 CIZ1 Cip1-interacting zinc finger protein yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 50.545 45.224 3 0.02859 58901 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 20.179 9.6939 33105000 0 33105000 0 0 0 0 0 0 0 0 0 0 0 0 0 41029 5007 36671 341791;341792 271103 271103 1 QAQVATGGGPGAPPGSQPDYSAAWAEYYR Unmodified 2951.3474 0.34744891 3690 Q92945 KHSRP Far upstream element-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.23 80.288 3 2.1206E-109 92938 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 137.9 134.97 248330000 0 0 0 4467000 11586000 13934000 12110000 14970000 11615000 23545000 24390000 24337000 10404000 21846000 75127000 41030 3690 36672 341793;341794;341795;341796;341797;341798;341799;341800;341801;341802;341803;341804 271104;271105;271106;271107;271108;271109;271110;271111;271112;271113;271114;271115;271116 271106 13 QAQVPLAAVIK Unmodified 1136.6917 0.69174374 1729 P53992 SEC24C Protein transport protein Sec24C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74.992 74.468 2 1.6609E-06 93592 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.19 104.95 293380000 0 199090000 1963800 8016600 5199600 7212900 5777400 7009000 0 11216000 7462600 11013000 9624000 6608400 13191000 41031 1729 36673 341805;341806;341807;341808;341809;341810;341811;341812;341813;341814;341815;341816;341817;341818 271117;271118;271119;271120;271121;271122;271123;271124;271125;271126;271127 271119 11 QAQYLGMSCDGPFKPDHYRY Oxidation (M) 2448.0627 0.062699971 1164 P23526 AHCY Adenosylhomocysteinase yes yes 0 1 2 By MS/MS 10 0 1 1 61.854 62.434 4 0.0006656 70587 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.238 41.314 16772000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16772000 41032 1164 36674 341819 271128 271128 1684 1 QARCQGVVCAMK Unmodified 1406.6581 0.6580939 517 O75534 CSDE1 Cold shock domain-containing protein E1 yes yes 0 0 1 By MS/MS 2 0 1 1 29.838 24.218 3 0.0064988 34016 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.391 40.525 38042000 38042000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41033 517 36675 341820 271129 271129 1 QARDMAEAHK Unmodified 1155.5455 0.5454902 131 O00233 PSMD9 26S proteasome non-ATPase regulatory subunit 9 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 6.3414 3.5166 2 6.3328E-10 6269 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 173.14 121.35 106350000 93711000 0 12641000 0 0 0 0 0 0 0 0 0 0 0 0 41034 131 36676 341821;341822 271130 271130 1 QARPPDASAAR Unmodified 1138.5843 0.58431855 690 O95785 WIZ Protein Wiz yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 9.6343 9.7468 3 0.0050902 8093 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 61.435 36.66 59709000 0 0 0 5454300 5196500 4843000 485660 4041200 4847300 4784900 0 9658100 7348200 4990400 8060000 41035 690 36677 341823;341824;341825;341826;341827;341828;341829;341830;341831;341832;341833 271131;271132;271133;271134;271135 271135 1 QASAASYFQK Unmodified 1099.5298 0.52982336 535 O75717 WDHD1 WD repeat and HMG-box DNA-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 42.309 37.392 2 0.016255 48625 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.507 67.507 119620000 0 119620000 0 0 0 0 0 0 0 0 0 0 0 0 0 41036 535 36678 341834;341835;341836 271136;271137 271136 2 QASCSGDEYRSLK Unmodified 1499.6675 0.66745583 653 O95394 PGM3 Phosphoacetylglucosamine mutase yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 23.949 19.903 2;3 0.013019 26243 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.463 70.572 18935000 0 18935000 0 0 0 0 0 0 0 0 0 0 0 0 0 41037 653 36679 341837;341838 271138;271139 271138 1 QASEGPLK Unmodified 828.43413 0.43413207 782 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 4 2 12 3 2 1 1 1 1 1 1 1 1 1 1 1 1 1 12.461 11.382 2 0.0066594 9859 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.997 49.638 15842000000 3087500000 11153000000 239800000 140940000 31516000 34199000 34438000 40768000 22226000 30778000 182960000 188520000 29611000 150620000 475220000 41038 782 36680 341839;341840;341841;341842;341843;341844;341845;341846;341847;341848;341849;341850;341851;341852;341853;341854;341855;341856 271140;271141;271142;271143;271144;271145;271146;271147;271148;271149;271150;271151;271152;271153;271154;271155;271156;271157;271158;271159;271160;271161;271162;271163;271164 271148 24 QASMEDIPGRGHK Oxidation (M) 1440.678 0.67796094 4124 Q9BS40 LXN Latexin yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 14.208 11.044 3 0.002659 14233 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 76.326 64.058 456150000 397880000 0 58275000 0 0 0 0 0 0 0 0 0 0 0 0 41039 4124 36681 341857;341858 271165;271166 271166 5609 1 QASMEDIPGRGHK Unmodified 1424.683 0.68304632 4124 Q9BS40 LXN Latexin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 27.843 23.533 3 0.0003628 33238 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.365 70.686 211710000 185650000 11630000 14433000 0 0 0 0 0 0 0 0 0 0 0 0 41040 4124 36681 341859;341860;341861 271167 271167 1 QASPETSASPDGSQNLVYETELLR Unmodified 2591.2351 0.23510449 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 81.772 81.85 3 0.003049 94806 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 24.927 20.576 23291000 0 0 0 0 2187200 0 2677300 0 0 3402100 5821300 3799400 2882000 2522000 0 41041 2446 36682 341862;341863;341864;341865;341866;341867;341868 271168;271169;271170;271171 271170 4 QASPNIVIALAGNK Unmodified 1394.7882 0.78816332 1646 P51148 RAB5C Ras-related protein Rab-5C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.279 78.339 2 6.0356E-19 90472 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 130.98 125.49 2704000000 0 0 0 105880000 143220000 180720000 184750000 203880000 163110000 340790000 368770000 318340000 187010000 207850000 299710000 41042 1646 36683 341869;341870;341871;341872;341873;341874;341875;341876;341877;341878;341879;341880 271172;271173;271174;271175;271176;271177;271178;271179;271180;271181;271182;271183;271184;271185;271186 271186 14 QASPNIVIALSGNK Unmodified 1410.7831 0.78307794 1104 P20339 RAB5A Ras-related protein Rab-5A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.038 75.097 2 1.2841E-12 86722 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 126.76 110.51 334960000 0 0 0 10670000 17910000 25143000 25998000 25071000 21507000 33803000 43812000 39943000 20209000 22169000 48727000 41043 1104 36684 341881;341882;341883;341884;341885;341886;341887;341888;341889;341890;341891;341892 271187;271188;271189;271190;271191;271192;271193;271194;271195;271196;271197;271198 271188 12 QASPSIVIALAGNK Unmodified 1367.7773 0.77726428 1829 P61020 RAB5B Ras-related protein Rab-5B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.375 78.434 2 4.0892E-06 90528 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 104.82 88.491 498160000 0 0 0 20469000 26861000 40067000 34684000 36312000 31441000 59592000 59513000 66759000 32377000 33596000 56490000 41044 1829 36685 341893;341894;341895;341896;341897;341898;341899;341900;341901;341902;341903;341904 271199;271200;271201;271202;271203;271204;271205;271206;271207;271208;271209;271210 271200 12 QASQGMVGQLAAR Oxidation (M) 1331.6616 0.66158259 5077 Q9Y230 RUVBL2 RuvB-like 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 1 2 2 2 2 2 2 28.943 29.138 2 7.0742E-13 30690 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 129.85 111.23 420010000 0 0 0 29743000 20292000 30214000 33155000 24826000 12952000 36607000 39148000 52401000 44725000 36649000 59295000 41045 5077 36686 341905;341906;341907;341908;341909;341910;341911;341912;341913;341914;341915;341916;341917;341918;341919;341920;341921;341922;341923;341924;341925;341926;341927 271211;271212;271213;271214;271215;271216;271217;271218;271219;271220;271221;271222;271223;271224;271225;271226;271227;271228;271229;271230;271231;271232;271233;271234;271235 271221 6465 24 QASQGMVGQLAAR Unmodified 1315.6667 0.66666797 5077 Q9Y230 RUVBL2 RuvB-like 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.192 45.365 2 3.1051E-25 50583 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 159.79 141.93 348390000 0 0 0 16916000 15840000 26704000 23089000 21902000 0 24284000 44012000 40843000 29487000 32997000 72320000 41046 5077 36686 341928;341929;341930;341931;341932;341933;341934;341935;341936;341937;341938;341939 271236;271237;271238;271239;271240;271241;271242;271243;271244;271245;271246;271247 271241 12 QASTDAGTAGALTPQHVR Unmodified 1779.8864 0.88637381 1516 P46937 YAP1 Transcriptional coactivator YAP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 35.053 35.251 3 0.00016738 37562 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.304 54.336 273390000 0 0 0 14416000 8239200 0 15607000 14545000 12782000 23483000 30227000 40041000 20966000 42093000 50993000 41047 1516 36687 341940;341941;341942;341943;341944;341945;341946;341947;341948;341949;341950 271248;271249;271250;271251;271252;271253;271254 271250 5 QASVADYEETVK Unmodified 1338.6303 0.63032527 1573 P49419 ALDH7A1 Alpha-aminoadipic semialdehyde dehydrogenase yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 42.985 43.074 2 0.00015103 47969 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 86.014 61.176 29362000 0 0 0 0 3364700 0 3275000 0 0 4227700 10255000 0 0 8239500 0 41048 1573 36688 341951;341952;341953;341954;341955 271255 271255 1 QASVTLQPLK Unmodified 1083.6288 0.62880913 1975 P78345 RPP38 Ribonuclease P protein subunit p38 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 51.147 51.534 2 0.011338 58474 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 54.416 28.477 22061000 0 0 0 0 0 9036100 0 0 0 0 0 13025000 0 0 0 41049 1975 36689 341956;341957 271256;271257 271256 2 QATDDASLLIVNR Unmodified 1414.7416 0.74160705 2816 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 67.931 68.002 2 1.0765E-09 77924 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 116.77 71.398 100890000 0 0 0 6216900 6886000 8209400 9838400 10895000 5520600 10161000 9732500 10653000 8932000 0 13843000 41050 2816 36690 341958;341959;341960;341961;341962;341963;341964;341965;341966;341967;341968 271258;271259;271260;271261;271262;271263;271264 271260 6 QATDNSEISSATK Unmodified 1350.6263 0.62630252 1498 P46100 ATRX Transcriptional regulator ATRX yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 17.252 17.437 2 0.00058325 17220 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 77.062 53.634 43925000 0 0 0 2729000 2102900 2633300 2686400 2500100 2309200 3328400 4063800 6680700 3967300 3971500 6952100 41051 1498 36691 341969;341970;341971;341972;341973;341974;341975;341976;341977;341978;341979;341980 271265;271266;271267;271268;271269;271270;271271;271272;271273;271274;271275 271273 11 QATEDRLTSAK Unmodified 1218.6204 0.62042929 3662;2171 Q09472;Q92793 EP300;CREBBP Histone acetyltransferase p300;CREB-binding protein no no 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 12.987 12.628 2;3 0.00021302 15986 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.23 82.876 217030000 0 19647000 0 12913000 14439000 13643000 16149000 13622000 11256000 21628000 20094000 23568000 19671000 13208000 17192000 41052 2171;3662 36692 341981;341982;341983;341984;341985;341986;341987;341988;341989;341990;341991;341992;341993;341994 271276;271277;271278;271279;271280;271281;271282 271276 5 QATEGPCNMPK Unmodified 1231.5325 0.53254226 511 O75521 ECI2 Enoyl-CoA delta isomerase 2, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 22.795 22.936 2 0.035565 23035 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.549 26.398 19666000 0 0 0 0 1549700 3764500 1528500 1540700 1683700 3157700 0 0 0 2064800 4376700 41053 511 36693 341995;341996;341997;341998;341999;342000;342001;342002 271283 271283 1 QATELALLQR Unmodified 1141.6455 0.64552182 3693 Q92974 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.314 66.399 2 0.0015597 75060 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 93.267 71.967 525530000 0 0 0 27527000 28879000 35451000 42424000 33705000 35215000 52931000 60110000 64583000 51311000 37317000 56072000 41054 3693 36694 342003;342004;342005;342006;342007;342008;342009;342010;342011;342012;342013;342014 271284;271285;271286;271287;271288;271289;271290;271291;271292;271293;271294;271295;271296 271292 13 QATENAKEEVRR Unmodified 1429.7274 0.72735397 1211 P26641 EEF1G Elongation factor 1-gamma yes yes 0 0 2 By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 6.6766 6.8032 3 0.012138 4546 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 56.122 43.74 67997000 0 0 0 5391200 3778700 0 9506100 4609200 1978100 6152400 10682000 6158500 4780000 0 14961000 41055 1211 36695 342015;342016;342017;342018;342019;342020;342021;342022;342023;342024 271297;271298 271298 2 QATGIEDGELRR Unmodified 1343.6793 0.67934115 2332 Q13620 CUL4B Cullin-4B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 28.98 29.14 3 0.0069504 31477 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 56.205 41.174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41056 2332 36696 342025;342026;342027;342028;342029;342030;342031 271299;271300;271301;271302;271303;271304;271305 271302 7 QATINIGTIGHVAHGK Unmodified 1615.8794 0.87943794 1427 P41091;Q2VIR3 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 54.102 54.386 3 0.0001811 61554 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 68.283 45.292 137470000 0 0 0 0 0 13907000 7714200 9656100 7824300 13812000 15874000 15097000 0 17634000 35953000 41057 1427 36697 342032;342033;342034;342035;342036;342037;342038;342039;342040 271306;271307;271308 271307 3 QATLIPDEVFDAVK Unmodified 1544.8086 0.80862399 4468 Q9H9A6 LRRC40 Leucine-rich repeat-containing protein 40 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 88.948 87.896 2 1.2044E-23 109357 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.44 113.41 635060000 8908700 389270000 5727800 3432400 16739000 24949000 12377000 18108000 13544000 36840000 20718000 22360000 10430000 12492000 39163000 41058 4468 36698 342041;342042;342043;342044;342045;342046;342047;342048;342049;342050;342051;342052;342053;342054;342055;342056;342057 271309;271310;271311;271312;271313;271314;271315;271316;271317 271311 9 QATLLLER Unmodified 942.54983 0.54983053 400 O60443 DFNA5 Non-syndromic hearing impairment protein 5 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 53.068 53.057 2 0.046168 59649 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 48.283 12.403 77046000 0 0 0 6718000 5425600 0 9138900 7466200 0 18122000 18185000 0 11991000 0 0 41059 400 36699 342058;342059;342060;342061;342062;342063;342064 271318 271318 1 QATPGVPAQQSPSM Oxidation (M) 1413.6558 0.65582851 397 O60341 KDM1A Lysine-specific histone demethylase 1A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 34.712 34.968 2 0.00022628 38255 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 77.379 72.928 176240000 0 0 0 0 9727300 0 16155000 13918000 38954000 15131000 15439000 19903000 0 22858000 24156000 41060 397 36700 342065;342066;342067;342068;342069;342070;342071;342072;342073;342074 271319;271320;271321;271322;271323;271324;271325;271326;271327 271319 501 8 QATQLINALIK Unmodified 1211.7238 0.72377215 472 O75179 ANKRD17 Ankyrin repeat domain-containing protein 17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.205 81.265 2 0.0037175 93208 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 63.227 43.441 83108000 0 0 0 1841200 2823100 6051700 3258900 5535300 5720700 9246800 7429000 7581600 5398600 8047300 20174000 41061 472 36701 342075;342076;342077;342078;342079;342080;342081;342082;342083;342084;342085;342086 271328;271329;271330;271331;271332;271333;271334;271335;271336 271335 9 QATSISSETK Unmodified 1050.5193 0.51931826 1694 P52701 MSH6 DNA mismatch repair protein Msh6 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 11.506 10.773 2 0.01064 9464 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.649 16.895 3255700000 146900000 2094700 0 292790000 167590000 405400000 0 256040000 0 0 0 631110000 342360000 0 1011500000 41062 1694 36702 342087;342088;342089;342090;342091;342092;342093;342094;342095 271337;271338;271339;271340;271341 271339 4 QATSTSGPASAVADPPSTEK Unmodified 1900.9014 0.90141475 3886 Q96IZ7 RSRC1 Serine/Arginine-related protein 53 yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 37.234 37.399 2 3.0912E-09 41298 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 76.262 70.656 36923000 0 0 0 2976500 3456200 2909800 2732300 2760600 2729300 4078800 3323400 5524800 0 3710400 2721300 41063 3886 36703 342096;342097;342098;342099;342100;342101;342102;342103;342104;342105;342106 271342;271343;271344;271345;271346 271343 5 QATTNVYQVQTGSEYTDTSNHSSLK Unmodified 2758.2682 0.26819553 2382 Q14161 GIT2 ARF GTPase-activating protein GIT2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 55.568 50.221 3 1.6809E-223 65021 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 232.11 225.54 65391000 0 65391000 0 0 0 0 0 0 0 0 0 0 0 0 0 41064 2382 36704 342107;342108 271347;271348;271349 271348 3 QATTPKPDK Unmodified 984.52401 0.52400971 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 6.4259 3.125 2 0.0098799 5178 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.66 85.068 45901000 0 45901000 0 0 0 0 0 0 0 0 0 0 0 0 0 41065 3443 36705 342109;342110 271350 271350 1 QATVGDINTERPGMLDFTGK Oxidation (M) 2165.0423 0.042282105 835 P07108 DBI Acyl-CoA-binding protein yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.28 1 2 8 1 2 1 1 1 1 1 1 1 1 68.268 66.871 3 5.9918E-18 81696 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 104.84 100.94 1005900000 1044800 485600000 0 47103000 44390000 58775000 40548000 0 43096000 64755000 0 148960000 0 71642000 0 41066 835 36706 342111;342112;342113;342114;342115;342116;342117;342118;342119;342120;342121 271351;271352;271353;271354;271355;271356;271357;271358;271359;271360;271361;271362;271363 271359 1017 13 QATVGDINTERPGMLDFTGK Unmodified 2149.0474 0.047367483 835 P07108 DBI Acyl-CoA-binding protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 1 2 1 1 1 1 1 1 1 1 1 2 76.02 74.951 2;3 9.7942E-60 86296 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 147.12 130.77 1770400000 156280000 988340000 0 10501000 0 25237000 1403700 28826000 19058000 36159000 80508000 121370000 0 52759000 249990000 41067 835 36706 342122;342123;342124;342125;342126;342127;342128;342129;342130;342131;342132;342133;342134;342135 271364;271365;271366;271367;271368;271369;271370;271371;271372;271373;271374;271375;271376;271377;271378;271379;271380;271381 271369 18 QAVAISGGQILVAK Unmodified 1353.798 0.79799972 5000 Q9ULM3 YEATS2 YEATS domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 69.066 69.155 2 0.010134 79225 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.353 34.653 27013000 0 0 0 0 3616900 3708400 2385900 2579900 0 4113400 3634200 6974300 0 0 0 41068 5000 36707 342136;342137;342138;342139;342140;342141;342142 271382;271383 271383 2 QAVDQISSGFFSPK Unmodified 1509.7464 0.74635808 939 P11216 PYGB Glycogen phosphorylase, brain form yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 79.411 75.37 2 1.6454E-09 90435 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 135.99 120.1 54506000 0 54506000 0 0 0 0 0 0 0 0 0 0 0 0 0 41069 939 36708 342143;342144 271384;271385;271386;271387 271385 4 QAVDVSPLR Unmodified 983.53999 0.53999412 1512 P46782 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.633 43.808 2 0.004058 49796 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 113.26 93.741 834510000 0 0 0 54634000 66439000 55128000 44226000 39601000 31912000 86021000 92543000 104080000 94017000 82876000 83034000 41070 1512 36709 342145;342146;342147;342148;342149;342150;342151;342152;342153;342154;342155;342156 271388;271389;271390;271391;271392;271393;271394;271395;271396;271397 271397 8 QAVDVSPLRR Unmodified 1139.6411 0.64110515 1512 P46782 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 19 1 2 2 2 2 2 2 2 1 1 1 1 35.626 35.768 2;3 2.7202E-12 39487 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 178.94 104.53 1217900000 0 0 0 98338000 128990000 134170000 117900000 104520000 98449000 174390000 173500000 39029000 54572000 38363000 55644000 41071 1512 36710 342157;342158;342159;342160;342161;342162;342163;342164;342165;342166;342167;342168;342169;342170;342171;342172;342173;342174;342175 271398;271399;271400;271401;271402;271403;271404;271405;271406;271407;271408;271409;271410;271411;271412 271408 7 QAVEQQIQSHR Unmodified 1322.6691 0.66911081 1328 P33176 KIF5B Kinesin-1 heavy chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 2 2 2 2 2 2 20.007 20.17 2;3 3.0097E-11 20640 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 152.97 105.15 457690000 0 0 0 40138000 33694000 67663000 31742000 27964000 25564000 51404000 55325000 50292000 40754000 33145000 0 41072 1328 36711 342176;342177;342178;342179;342180;342181;342182;342183;342184;342185;342186;342187;342188;342189;342190;342191;342192;342193;342194;342195;342196;342197 271413;271414;271415;271416;271417;271418;271419;271420;271421;271422;271423;271424;271425;271426;271427;271428 271423 8 QAVEQQIQSHRETHQK Unmodified 1945.9718 0.97183477 1328 P33176 KIF5B Kinesin-1 heavy chain yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.67 1.6 1 23 1 2 1 2 2 2 2 2 2 2 2 2 2 14.967 14.938 3;4 2.061E-40 23836 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 140.49 118.67 383970000 37383000 0 0 27662000 2359500 28294000 28271000 20221000 22241000 36152000 39016000 34519000 39698000 20435000 47723000 41073 1328 36712 342198;342199;342200;342201;342202;342203;342204;342205;342206;342207;342208;342209;342210;342211;342212;342213;342214;342215;342216;342217;342218;342219;342220;342221 271429;271430;271431;271432;271433;271434 271432 6 QAVGGAGPPNPAINGSAPR Unmodified 1729.886 0.88597988 1245 P29353 SHC1 SHC-transforming protein 1 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 46.03 46.5 2 2.8539E-17 51346 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 121.76 99.562 25249000 0 0 0 0 0 0 5506400 0 0 0 0 7471800 5487200 0 6783500 41074 1245 36713 342222;342223;342224;342225 271435;271436 271435 2 QAVMEMMSQK 3 Oxidation (M) 1229.509 0.50902962 4013 Q99471 PFDN5 Prefoldin subunit 5 yes yes 0 3 0 By MS/MS 2.5 0.5 1 1 2 6.9406 3.6398 2 0.00097215 5686 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.051 83.711 21364000 0 21364000 0 0 0 0 0 0 0 0 0 0 0 0 0 41075 4013 36714 342226;342227 271437 271437 5510;5511;5512 1 QAVMEMMSQK Oxidation (M) 1197.5192 0.51920038 4013 Q99471 PFDN5 Prefoldin subunit 5 yes yes 0 1 0 By MS/MS 2 0 1 1 33.919 29.275 2 0.0021138 38292 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.89 87.331 49316000 0 49316000 0 0 0 0 0 0 0 0 0 0 0 0 0 41076 4013 36714 342228 271438 271438 5510;5511;5512 1 QAVMEMMSQK Unmodified 1181.5243 0.52428576 4013 Q99471 PFDN5 Prefoldin subunit 5 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 55.002 48.026 2 0.0079799 62347 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.933 90.07 246180000 5030000 241150000 0 0 0 0 0 0 0 0 0 0 0 0 0 41077 4013 36714 342229;342230 271439;271440 271439 2 QAVPLFSK Unmodified 888.5069 0.50690308 4278 Q9BZZ5 API5 Apoptosis inhibitor 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 54.715 54.851 2 0.021 61278 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 62.338 23.365 885490000 0 0 0 51465000 48736000 92252000 66321000 59386000 52938000 99379000 107000000 69145000 73371000 73017000 92482000 41078 4278 36715 342231;342232;342233;342234;342235;342236;342237;342238;342239;342240;342241;342242 271441;271442 271442 2 QAVQILDELAEK Unmodified 1355.7296 0.72964538 4074 Q99961 SH3GL1 Endophilin-A2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 51 2 2 5 3 4 5 6 5 4 7 5 3 53.986 54.193 2;3 1.2294E-08 93231 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 128.17 115.55 1398200000 0 0 0 53420000 14388000 194300000 77880000 80646000 200070000 117650000 99270000 181730000 148480000 88843000 141530000 41079 4074 36716 342243;342244;342245;342246;342247;342248;342249;342250;342251;342252;342253;342254;342255;342256;342257;342258;342259;342260;342261;342262;342263;342264;342265;342266;342267;342268;342269;342270;342271;342272;342273;342274;342275;342276;342277;342278;342279;342280;342281;342282;342283;342284;342285;342286;342287;342288;342289;342290;342291;342292;342293 271443;271444;271445;271446;271447;271448;271449;271450;271451;271452;271453;271454;271455;271456;271457;271458;271459;271460;271461;271462;271463;271464;271465;271466;271467;271468;271469;271470;271471;271472;271473;271474;271475;271476;271477;271478;271479;271480;271481;271482;271483;271484;271485;271486;271487;271488;271489;271490;271491;271492;271493;271494;271495;271496;271497;271498;271499;271500;271501;271502 271492 55 QAVTPPGLQEAINDLVK Unmodified 1791.9731 0.97306355 653 O95394 PGM3 Phosphoacetylglucosamine mutase yes yes 0 0 0 By MS/MS 10 0 1 1 92.602 92.739 2 0.049307 107445 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 30.205 15.786 2387000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2387000 41080 653 36717 342294 271503 271503 1 QAVYFFSPAPDPR Unmodified 1493.7303 0.73031409 4670 Q9NVM4 PRMT7 Protein arginine N-methyltransferase 7 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 78.404 78.534 2 0.00011582 90370 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.687 59.301 34971000 0 0 0 0 0 7483700 0 3111800 0 6911800 0 0 0 4959800 12504000 41081 4670 36718 342295;342296;342297;342298;342299;342300 271504;271505;271506;271507;271508 271506 5 QAWATDDVAQIYDK Unmodified 1622.7577 0.75765105 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 73.498 73.006 2 1.0613E-29 90358 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 172.11 151.33 156730000 0 84385000 0 0 5162700 0 6973200 0 0 12548000 8207600 17487000 0 10584000 11381000 41082 19 36719 342301;342302;342303;342304;342305;342306;342307;342308;342309 271509;271510;271511;271512;271513;271514;271515;271516;271517;271518;271519;271520;271521;271522 271512 13 QAWFIENEEQEYVQTVK Unmodified 2140.0113 0.011299553 773 P04083 ANXA1 Annexin A1 yes yes 0 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 3 1 86.645 82.827 2;3 1.0304E-08 99038 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 122.46 117.28 74393000 0 71289000 3104100 0 0 0 0 0 0 0 0 0 0 0 0 41083 773 36720 342310;342311;342312;342313 271523;271524;271525 271524 3 QAWLWEEDK Unmodified 1203.556 0.55603811 1737 P54274 TERF1 Telomeric repeat-binding factor 1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS 10 0 4 1 1 1 1 9.3144 9.5537 3 0.047654 8208 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.198 29.389 28758000 0 0 0 0 0 0 0 0 2008900 1897200 0 4964900 0 0 19887000 41084 1737 36721 342314;342315;342316;342317 271526 271526 0 QAYTQFGGK Unmodified 998.48214 0.48214489 1196 P25789 PSMA4 Proteasome subunit alpha type-4 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 27.452 27.805 2 0.013257 28781 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.074 44.438 61575000 0 0 0 0 0 0 6612800 0 0 0 0 0 0 0 54962000 41085 1196 36722 342318;342319 271527 271527 1 QCADLPEEDEELRK Unmodified 1730.7781 0.77812849 4805 Q9P253 VPS18 Vacuolar protein sorting-associated protein 18 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.6 2.8 1 4 1 1 1 1 1 41.533 40.884 3 0.00059984 45915 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 40.941 36.973 30730000 0 3739200 0 0 0 6993200 0 0 0 0 4886700 0 5755000 0 9356000 41086 4805 36723 342320;342321;342322;342323;342324 271528;271529;271530;271531 271528 4 QCALVALEDVK Unmodified 1244.6435 0.64347291 433 O60825 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 72.905 72.602 2 0.00023955 84218 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 105.98 87.663 430520000 0 37382000 0 26065000 25700000 37997000 36056000 27150000 33551000 32195000 36767000 46444000 30949000 22430000 37830000 41087 433 36724 342325;342326;342327;342328;342329;342330;342331;342332;342333;342334;342335;342336;342337 271532;271533;271534;271535;271536;271537;271538;271539;271540;271541;271542;271543;271544 271544 12 QCANLQAAIADAEQR Unmodified 1657.7842 0.78421693 66;58;779;80 P04259;CON__P50446;CON__P02538;P02538;CON__P04259 KRT6B;KRT6A Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 6A no no 0 0 0 By MS/MS By matching By MS/MS 10 0 4 2 1 1 69.969 69.732 2;3 1.4071E-05 80646 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 97.911 72.694 + 19099000 0 0 0 14300000 0 0 0 995350 0 0 0 0 3803300 0 0 41088 779;80;58;66 36725 342338;342339;342340;342341 271545;271546 271545 1 QCANLQNAIADAEQR Unmodified 1700.79 0.79003058 74 CON__P13647;P13647 KRT5 Keratin, type II cytoskeletal 5 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 17 2 1 2 2 1 2 1 2 2 1 1 64.437 64.505 2;3 7.2704E-27 74343 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 130.56 120.88 + 126800000 0 0 0 39446000 3706700 13945000 0 8248700 2052500 13944000 6305900 15705000 12362000 3357900 7725700 41089 74 36726 342342;342343;342344;342345;342346;342347;342348;342349;342350;342351;342352;342353;342354;342355;342356;342357;342358 271547;271548;271549;271550;271551;271552;271553;271554;271555;271556;271557;271558;271559;271560;271561;271562 271561 12 QCANLQNAIADAEQRGELALK Unmodified 2312.1543 0.15429217 74 CON__P13647;P13647 KRT5 Keratin, type II cytoskeletal 5 no no 0 0 1 By MS/MS 10 0 1 1 83.669 83.275 3 0.0031355 96712 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 31.753 17.444 + 4692800 0 0 0 4692800 0 0 0 0 0 0 0 0 0 0 0 41090 74 36727 342359 271563 271563 1 QCEGITSPEGSK Unmodified 1291.5714 0.57143018 5221 Q9Y570 PPME1 Protein phosphatase methylesterase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 21.048 19.955 2 6.0661E-08 20865 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 119.27 97.746 110990000 11859000 7553900 0 0 10441000 0 14303000 0 0 0 28748000 0 0 11815000 26272000 41091 5221 36728 342360;342361;342362;342363;342364;342365;342366;342367;342368;342369;342370;342371;342372 271564;271565;271566;271567;271568;271569;271570;271571;271572;271573;271574;271575;271576 271571 13 QCFYEDIAQGTK Unmodified 1458.6449 0.64492948 5150 Q9Y3B3 TMED7 Transmembrane emp24 domain-containing protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 60.046 59.613 2 2.3017E-06 67924 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 113.46 106.8 249810000 0 98722000 0 12302000 11205000 10684000 15219000 17986000 8711600 11497000 23770000 15303000 12522000 11886000 0 41092 5150 36729 342373;342374;342375;342376;342377;342378;342379;342380;342381;342382;342383;342384 271577;271578;271579;271580;271581;271582;271583;271584;271585;271586;271587;271588;271589;271590;271591 271580 15 QCGNLTEDLK Unmodified 1176.5445 0.54448715 1695 P52732 KIF11 Kinesin-like protein KIF11 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 37.617 37.229 2 0.012649 47413 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.614 46.691 76554000 0 44851000 0 0 2936800 3527900 2718700 0 0 4159200 4227300 0 3318600 4293100 6521100 41093 1695 36730 342385;342386;342387;342388;342389;342390;342391;342392;342393 271592;271593;271594;271595;271596;271597 271595 6 QCGQVAAAAAAQPPASHGPER Unmodified 2072.981 0.98101925 694 O95817 BAG3 BAG family molecular chaperone regulator 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 33.985 33.716 3 1.3082E-11 36918 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 80.975 71.317 108150000 0 0 2350300 9146600 8872500 10670000 9899300 8036800 5878800 14801000 0 24190000 0 14308000 0 41094 694 36731 342394;342395;342396;342397;342398;342399;342400;342401;342402;342403;342404 271598;271599;271600;271601;271602;271603;271604;271605;271606;271607 271603 10 QCLEDSDAGASNEYDSSPAAWNK Unmodified 2514.0241 0.024125438 1496 P46063 RECQL ATP-dependent DNA helicase Q1 yes yes 0 0 0 By MS/MS 2 0 1 1 62.278 56.385 3 0.00050858 72346 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 48.832 48.832 13486000 0 13486000 0 0 0 0 0 0 0 0 0 0 0 0 0 41095 1496 36732 342405 271608 271608 1 QCNDAPVSVLQEDIVGSLK Unmodified 2071.0256 0.025569409 2891 Q6KC79 NIPBL Nipped-B-like protein yes yes 0 0 0 By MS/MS 2 0 1 1 96.205 91.384 3 0.0023458 113260 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 39.983 32.537 16636000 0 16636000 0 0 0 0 0 0 0 0 0 0 0 0 0 41096 2891 36733 342406 271609 271609 1 QCPETEPHDTK Unmodified 1340.5667 0.56667916 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 6.7263 6.8136 3 0.026038 5088 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 28.361 19.149 30350000 0 0 0 3231600 2573400 3031100 2668400 3037100 0 3460200 4947700 4180000 0 3220000 0 41097 3443 36734 342407;342408;342409;342410;342411;342412;342413;342414;342415 271610;271611;271612 271610 3 QCPNFLIAR Unmodified 1117.5702 0.57024839 2429 Q14678 KANK1 KN motif and ankyrin repeat domain-containing protein 1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 63.255 63.528 2 0.014024 72469 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 58.917 44.799 14311000 0 0 0 0 0 0 2639200 1614100 0 1968100 3659400 0 0 0 4429900 41098 2429 36735 342416;342417;342418;342419;342420 271613 271613 1 QCPTENMAR Unmodified 1105.4645 0.46446269 323 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 15.114 15.279 2 0.0034025 14123 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.992 84.404 148320000 0 0 0 11599000 7868600 7649600 10079000 8959300 8557800 11746000 24983000 17560000 0 18257000 21057000 41099 323 36736 342421;342422;342423;342424;342425;342426;342427;342428;342429;342430;342431 271614;271615;271616;271617 271615 4 QCPTENMAR Oxidation (M) 1121.4594 0.45937731 323 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 yes yes 0 1 0 By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.2789 6.3992 2 0.034888 4842 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 41.429 18.938 13318000 0 0 0 1766200 566380 703060 926620 492920 434320 932360 4060100 1151700 424090 723500 1136900 41100 323 36736 342432;342433;342434;342435;342436;342437;342438;342439;342440;342441;342442;342443 271618 271618 1 QCQQNLDAASK Unmodified 1261.5721 0.57209888 5278 Q9Y6D9 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 11.558 11.735 2 0.00013158 10772 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 109.66 103.56 54211000 0 0 0 2986000 0 6622300 4402700 4138600 4360000 0 5297600 6836500 6910900 7348600 5307600 41101 5278 36737 342444;342445;342446;342447;342448;342449;342450;342451;342452;342453;342454;342455 271619;271620;271621;271622;271623;271624;271625;271626 271621 7 QCREQHAAELK Unmodified 1368.6568 0.65683157 2689 Q4V328 GRIPAP1 GRIP1-associated protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 7.5111 5.2839 3 0.024368 7448 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 61.815 36.473 13044000 0 0 13044000 0 0 0 0 0 0 0 0 0 0 0 0 41102 2689 36738 342456 271627 271627 0 QCRLANGLA Unmodified 1001.5076 0.50764813 5283 Q9Y6H1 CHCHD2 Coiled-coil-helix-coiled-coil-helix domain-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 39.349 34.293 2 0.037714 47698 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.602 87.464 76729000 72536000 0 4193000 0 0 0 0 0 0 0 0 0 0 0 0 41103 5283 36739 342457;342458 271628 271628 0 QCSDLLSQAQYHVAR Unmodified 1774.8421 0.84206616 2945 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 57.926 58.099 3 3.6656E-05 65994 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 75.669 67.693 248630000 0 0 0 9803100 0 20061000 15453000 11917000 13090000 18994000 28934000 39669000 31747000 26235000 32728000 41104 2945 36740 342459;342460;342461;342462;342463;342464;342465;342466;342467;342468;342469 271629;271630;271631;271632;271633;271634;271635;271636;271637;271638 271631 8 QCSDSSAMESLTK Unmodified 1442.6017 0.60174403 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 38.269 38.402 2 0.0010082 43006 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 78.653 68.699 25148000 0 0 0 2436500 1684000 2605800 2610700 0 0 2691100 0 3383200 0 3379100 6357500 41105 3641 36741 342470;342471;342472;342473;342474;342475;342476;342477 271639;271640;271641;271642;271643 271643 5 QCSELGICAVSVGPK Unmodified 1603.7698 0.76981241 2042 Q00653 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit yes yes 0 0 0 By MS/MS 2 0 1 1 73.655 68.11 2 1.6338E-06 86079 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.44 88.749 28128000 0 28128000 0 0 0 0 0 0 0 0 0 0 0 0 0 41106 2042 36742 342478 271644;271645 271645 2 QCVENADLPEGEK Unmodified 1487.6562 0.65622244 4011 Q99460 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34.985 34.323 2 5.2118E-12 37536 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 123.67 111.96 369100000 9357600 7787300 0 24970000 28691000 31171000 9521800 8802500 8414500 42028000 80512000 65746000 8038400 10551000 33512000 41107 4011 36743 342479;342480;342481;342482;342483;342484;342485;342486;342487;342488;342489;342490;342491;342492 271646;271647;271648;271649;271650;271651;271652;271653 271650 8 QCVNRIITEK Unmodified 1259.6656 0.66560534 1774 P55809 OXCT1 Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 34.308 28.986 2;3 5.1232E-05 40776 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 174.02 98.81 133910000 129640000 0 4262900 0 0 0 0 0 0 0 0 0 0 0 0 41108 1774 36744 342493;342494;342495 271654;271655;271656 271656 2 QCVVGPNHAAFLLEDGR Unmodified 1881.9156 0.91556545 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 71.924 72.047 3 0.024499 83314 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 27.714 24.11 18528000 0 0 0 0 0 3433200 0 0 0 4346800 4306800 0 2993200 3447800 0 41109 619 36745 342496;342497;342498;342499;342500 271657 271657 1 QCYERGEK Unmodified 1068.4658 0.4658429 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 1 By MS/MS 2 0 1 1 5.6456 3.4405 2 0.015342 5067 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 122.13 84.483 10297000 0 0 10297000 0 0 0 0 0 0 0 0 0 0 0 0 41110 2392 36746 342501 271658 271658 1 QCYLPDNAQGRK Unmodified 1448.683 0.68304632 3158 Q86UW9 DTX2 Probable E3 ubiquitin-protein ligase DTX2 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 27.065 27.538 3 0.0054221 29297 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 32.518 27.338 7595800 0 0 0 0 0 0 0 0 0 0 7595800 0 0 0 0 41111 3158 36747 342502;342503 271659;271660 271659 2 QDAETPPPPDPPAPETLLAPPPLPSTPDPPRR Unmodified 3362.7147 0.71467061 3186 Q86WR7 PROSER2 Proline and serine-rich protein 2 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 2 1 1 1 1 1 1 85.651 85.732 3;4 8.1374E-09 99267 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.698 30.603 50212000 0 0 0 0 7891900 11184000 1710000 0 0 6714000 4750500 5910200 3951800 0 8099000 41112 3186 36748 342504;342505;342506;342507;342508;342509;342510;342511;342512 271661;271662;271663;271664;271665;271666;271667;271668 271664 8 QDAFANFANFSK Unmodified 1358.6255 0.62551466 2428 Q14677 CLINT1 Clathrin interactor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 8.64 2.9 1 1 9 2 1 1 1 1 1 1 1 1 1 78.709 78.064 2 3.0421E-05 96411 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.67 110.17 330970000 0 30351000 0 0 23006000 36350000 32101000 0 28384000 39759000 32862000 46091000 0 22128000 39936000 41113 2428 36749 342513;342514;342515;342516;342517;342518;342519;342520;342521;342522;342523 271669;271670;271671;271672;271673;271674;271675 271671 5 QDAQDLYEAGEK Unmodified 1365.6048 0.6048388 887 P09525 ANXA4 Annexin A4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.622 35.812 2 2.5993E-05 39954 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 94.363 74.033 50271000 0 0 0 6992900 3867300 5479900 3566000 4387600 0 0 5634700 5798500 3941100 4600600 6001800 41114 887 36750 342524;342525;342526;342527;342528;342529;342530;342531;342532;342533;342534;342535 271676;271677;271678;271679;271680;271681;271682;271683;271684;271685;271686;271687 271686 12 QDAQILYK Unmodified 977.5182 0.51819605 968 P12429 ANXA3 Annexin A3 yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 40.275 34.429 2 0.046406 45216 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.981 34.242 174750000 10803000 163950000 0 0 0 0 0 0 0 0 0 0 0 0 0 41115 968 36751 342536;342537 271688 271688 1 QDAQSLHGDIPQK Unmodified 1435.7056 0.7055559 4588 Q9NR30 DDX21 Nucleolar RNA helicase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 3 1 1 1 1 1 1 1 1 1 1 1 28.863 28.316 2;3 0.016009 36528 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 63.32 48.826 197680000 0 40753000 0 9465800 13523000 15433000 13536000 9911700 9639800 15658000 0 20790000 16931000 15793000 16247000 41116 4588 36752 342538;342539;342540;342541;342542;342543;342544;342545;342546;342547;342548;342549;342550;342551 271689;271690;271691 271690 3 QDAQVVLYR Unmodified 1090.5771 0.57710791 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.752 45.922 2 0.0010076 50569 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 131.03 95.676 767240000 0 0 0 37164000 32810000 64834000 43718000 36998000 44432000 66438000 76703000 95587000 60005000 90092000 118460000 41117 1986 36753 342552;342553;342554;342555;342556;342557;342558;342559;342560;342561;342562;342563 271692;271693;271694;271695;271696;271697;271698;271699;271700;271701 271695 2 QDATVQTERGSGEK Unmodified 1504.7118 0.71176349 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 0 1 By MS/MS By matching 2.33 0.471 2 1 2 1 8.187 5.2426 3 0.015664 7918 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 32.734 19.597 41956000 0 39477000 2478700 0 0 0 0 0 0 0 0 0 0 0 0 41118 2203 36754 342564;342565;342566 271702;271703 271702 2 QDAVPPVPAALQSMPTLDPR Unmodified 2102.083 0.083024708 5059 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 88.983 88.953 3 0.022162 103059 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 24.227 14.57 4511400 0 0 0 0 1137800 0 0 0 0 0 0 0 0 0 3373600 41119 5059 36755 342567;342568 271704 271704 1 QDCSQLVER Unmodified 1133.5135 0.51352137 5004 Q9ULT8 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 22.534 22.742 2 0.02592 23858 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 50.034 22.405 36526000 0 0 0 1746400 1797800 2575000 2056800 0 2795000 3415700 5024600 4912600 3203800 3117400 5881200 41120 5004 36756 342569;342570;342571;342572;342573;342574;342575;342576;342577;342578;342579 271705;271706;271707 271707 3 QDDGSSSASPSVQGAPR Unmodified 1644.734 0.73395549 4563 Q9NQA3 WASH6P WAS protein family homolog 6 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.599 23.803 2 0.00011971 24260 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.731 78.865 42220000 0 0 0 2585400 2319200 3503500 2412800 2493500 1964200 4139100 4479900 4425400 4414400 3383900 6099100 41121 4563 36757 342580;342581;342582;342583;342584;342585;342586;342587;342588;342589;342590;342591 271708;271709;271710;271711;271712;271713;271714 271710 6 QDDGTGPEK Unmodified 945.40395 0.40395415 3690 Q92945 KHSRP Far upstream element-binding protein 2 yes yes 0 0 0 By MS/MS 1 0 1 1 7.9704 25.115 2 0.081983 5988 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 60.91 43.349 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41122 3690 36758 342592 271715 271715 1 QDDIVQEK Unmodified 973.47164 0.47163978 2879 Q6GQQ9 OTUD7B OTU domain-containing protein 7B yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 16.052 16.227 2 0.044749 15911 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 48.787 21.991 18703000 0 0 0 0 0 1876100 2601100 1548400 0 2512300 5864900 0 0 4300300 0 41123 2879 36759 342593;342594;342595;342596;342597;342598 271716 271716 1 QDDRPPLTSLLSK Unmodified 1468.7886 0.78855725 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 1 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 71.502 71.537 3 0.013006 81393 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 28.146 17.416 125460000 0 0 0 10206000 10945000 0 0 15776000 13299000 0 21845000 0 16862000 13585000 22946000 41124 2361 36760 342599;342600;342601;342602;342603;342604;342605;342606 271717;271718;271719;271720;271721 271717 4 QDDVVQLELPVTEAQQLLSACLEK Unmodified 2725.3844 0.38441127 4584 Q9NR09 BIRC6 Baculoviral IAP repeat-containing protein 6 yes yes 0 0 0 By MS/MS 2 0 1 1 101.15 96.435 3 7.3307E-25 119166 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.73 96.884 19715000 0 19715000 0 0 0 0 0 0 0 0 0 0 0 0 0 41125 4584 36761 342607 271722 271722 1 QDEEERELR Unmodified 1202.5527 0.55274365 2945 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 11.499 11.79 3 0.0047953 9964 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.347 38.674 52974000 0 0 0 0 0 0 0 0 0 0 0 0 27055000 0 25918000 41126 2945 36762 342608;342609 271723;271724 271723 2 QDEEERELRAK Unmodified 1401.6848 0.68482046 2945 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog yes yes 0 0 2 By MS/MS 2 0 1 1 13.584 11.303 3 0.041177 14295 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 64.297 36.816 11577000 0 0 11577000 0 0 0 0 0 0 0 0 0 0 0 0 41127 2945 36763 342610 271725 271725 1 QDEEQRLK Unmodified 1044.52 0.51998696 1225 P27797 CALR Calreticulin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7.3092 6.8005 2 3.1672E-95 7707 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 242.52 79.179 302120000 40711000 172620000 13873000 2480000 2624800 8985800 3075800 5001300 12380000 3889800 10632000 2319900 4631300 4831200 14057000 41128 1225 36764 342611;342612;342613;342614;342615;342616;342617;342618;342619;342620;342621;342622;342623;342624;342625 271726;271727 271726 2 QDEEQRLKEEEEDK Unmodified 1803.8123 0.81226539 1225 P27797 CALR Calreticulin yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.65 3.65 5 12 2 1 2 1 1 1 1 1 1 1 1 1 1 1 1 24.144 23.037 3;4 1.2107E-42 24353 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 156.24 119.23 656490000 75895000 31060000 126170000 16001000 12613000 11985000 18737000 20516000 17132000 39805000 38965000 46397000 50217000 41537000 109460000 41129 1225 36765 342626;342627;342628;342629;342630;342631;342632;342633;342634;342635;342636;342637;342638;342639;342640;342641;342642 271728;271729;271730;271731;271732;271733;271734;271735;271736;271737;271738 271736 5 QDEHGYISR Unmodified 1103.4996 0.49958587 786 P04792 HSPB1 Heat shock protein beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 13.716 13.877 2 0.0035761 13215 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 108.98 91.738 43844000 0 0 0 0 6727900 0 0 12454000 0 11946000 12715000 0 0 0 0 41130 786 36766 342643;342644;342645;342646;342647;342648 271739;271740;271741;271742;271743;271744 271739 6 QDEPIDLFMIEIMEMK Unmodified 1980.9247 0.92465808 1410 P40227 CCT6A T-complex protein 1 subunit zeta yes yes 0 0 0 By MS/MS 2 0 1 1 103.56 95.434 2 0.0039942 122695 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.731 78.938 3505300 3505300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41131 1410 36767 342649 271745 271745 0 QDESSRAETLEDLK Unmodified 1619.7639 0.76385864 2993 Q6XZF7 DNMBP Dynamin-binding protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 2 1 1 1 1 2 42.383 42.671 3 0.0021167 47927 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 36.345 11.409 114000000 0 0 0 5571800 0 7661700 0 5987300 5364100 19105000 12687000 16832000 11556000 7935500 21301000 41132 2993 36768 342650;342651;342652;342653;342654;342655;342656;342657;342658;342659;342660;342661 271746;271747;271748;271749;271750;271751 271746 6 QDEVNAAWQR Unmodified 1215.5632 0.56324876 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 37.996 37.454 2 4.0342E-06 40584 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 149.65 108.62 108580000 0 29560000 0 5622400 3361000 6891800 4345500 4853400 3912400 8288200 9359100 8219200 3958400 6503500 13703000 41133 2344 36769 342662;342663;342664;342665;342666;342667;342668;342669;342670;342671;342672;342673;342674;342675 271752;271753;271754;271755;271756;271757;271758;271759;271760;271761;271762;271763;271764;271765 271757 14 QDFESTDESEDIESLIPK Unmodified 2080.9324 0.93244011 3566 Q8WVV4 POF1B Protein POF1B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 86.138 86.125 2 0.034338 99548 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 37.426 29.515 23304000 0 0 0 8063800 2053100 0 0 5436200 0 0 0 3328800 2083200 2339100 0 41134 3566 36770 342676;342677;342678;342679;342680;342681 271766 271766 1 QDFETLSQETK Unmodified 1324.6147 0.61467521 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 44.124 44.872 2 0.00028847 49885 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 93.448 73.215 17298000 0 0 0 0 0 0 0 0 0 0 0 9117200 0 0 8181000 41135 2495 36771 342682;342683;342684;342685 271767;271768;271769;271770 271770 4 QDFETVLLLEPGNK Unmodified 1601.8301 0.83008771 4425 Q9H6T3 RPAP3 RNA polymerase II-associated protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 87.378 86.201 2 0.00049078 100068 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 87.184 77.18 32832000 0 21680000 1282200 0 1132100 0 0 0 1527400 3913400 3296800 0 0 0 0 41136 4425 36772 342686;342687;342688;342689;342690;342691 271771;271772;271773;271774 271771 4 QDFQELIK Unmodified 1019.5288 0.52876073 4358 Q9H267 VPS33B Vacuolar protein sorting-associated protein 33B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 62.539 62.59 2 0.011003 71613 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 77.923 42.042 39638000 0 0 0 2962900 2312700 3276200 3827100 0 3059800 4688200 5009200 0 4396100 4571100 5534700 41137 4358 36773 342692;342693;342694;342695;342696;342697;342698;342699;342700;342701 271775;271776;271777 271775 3 QDFVQHFSQIVR Unmodified 1502.763 0.7630112 997 P14324 FDPS Farnesyl pyrophosphate synthase yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 74.879 75.037 3 0.0011147 85850 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.295 52.158 136770000 0 0 0 0 0 7544200 1917100 0 4502800 4820000 10646000 12314000 2152400 6949500 85923000 41138 997 36774 342702;342703;342704;342705;342706;342707;342708;342709;342710 271778;271779;271780 271779 3 QDGECGTLSK Unmodified 1093.471 0.47098786 95 CON__Q5D862;Q5D862 FLG2 Filaggrin-2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 9.8547 9.9601 2 1.1702E-16 8530 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 169.09 135.54 + 261570000 0 0 0 167650000 10599000 12593000 16139000 7899200 0 7935900 0 12208000 14067000 6955800 5529700 41139 95 36775 342711;342712;342713;342714;342715;342716;342717;342718;342719;342720;342721 271781;271782;271783;271784;271785;271786;271787;271788;271789;271790;271791 271782 10 QDGECGTLSKGELK Unmodified 1520.7141 0.71407167 95 CON__Q5D862;Q5D862 FLG2 Filaggrin-2 yes no 0 0 1 By MS/MS 10 0 1 1 25.845 25.645 3 0.0068402 27468 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 42.345 31.075 + 23937000 0 0 0 23937000 0 0 0 0 0 0 0 0 0 0 0 41140 95 36776 342722 271792 271792 1 QDGFTHILLSTK Unmodified 1358.7194 0.71941505 5078 Q9Y232 CDYL Chromodomain Y-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 71.821 70.648 3 0.0014201 93526 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.76 46.818 47600000 20520000 0 0 0 0 5354300 0 0 3359800 4351900 0 4760700 0 0 9253800 41141 5078 36777 342723;342724;342725;342726;342727;342728 271793;271794 271794 2 QDGQFSVLFTK Unmodified 1268.6401 0.6401021 71 CON__P12763 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 77.091 77.258 2 0.00074428 88762 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.533 44.641 + 30545000 0 0 0 0 0 4685300 0 2144400 0 0 4636600 6287700 0 4023700 8767100 41142 71 36778 342729;342730;342731;342732;342733;342734;342735;342736 271795;271796;271797;271798;271799;271800;271801 271797 7 QDGSVDFGR Unmodified 979.43592 0.43592298 758 P02675 FGB Fibrinogen beta chain;Fibrinopeptide B;Fibrinogen beta chain no no 0 0 0 By MS/MS 10 0 1 1 26.869 27.038 2 0.012702 28940 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 60.91 33.948 + 7954900 0 0 0 0 0 0 0 7954900 0 0 0 0 0 0 0 41143 758 36779 342737 271802;271803 271803 2 QDHPSSMGVYGQESGGFSGPGENR Oxidation (M) 2495.0408 0.040778555 2065 Q01844 EWSR1 RNA-binding protein EWS yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.083 42.26 3 4.1428E-257 47068 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 227.37 214.52 705470000 0 0 0 19339000 42335000 38833000 97068000 41001000 36172000 60345000 64252000 127610000 75487000 45237000 57787000 41144 2065 36780 342738;342739;342740;342741;342742;342743;342744;342745;342746;342747;342748;342749 271804;271805;271806;271807;271808;271809;271810;271811;271812;271813;271814;271815;271816;271817;271818 271809 3359 15 QDHPSSMGVYGQESGGFSGPGENR Unmodified 2479.0459 0.045863933 2065 Q01844 EWSR1 RNA-binding protein EWS yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 2 1 1 2 2 2 1 1 2 2 51.587 51.823 3 1.4065E-82 57943 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 150.26 147.25 254110000 0 0 0 10048000 0 27809000 11392000 16471000 18305000 24829000 28679000 28179000 16363000 23050000 48985000 41145 2065 36780 342750;342751;342752;342753;342754;342755;342756;342757;342758;342759;342760;342761;342762;342763;342764;342765;342766 271819;271820;271821;271822;271823;271824;271825;271826;271827;271828;271829;271830;271831;271832;271833 271832 14 QDIAFAYQR Unmodified 1110.5458 0.54580778 840 P07355 ANXA2 Annexin A2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 52.851 52.686 2 1.9226E-38 58855 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 186.09 165.53 147460000 0 0 0 81032000 21532000 0 0 0 0 0 0 44891000 0 0 0 41146 840 36781 342767;342768;342769 271834;271835;271836 271834 3 QDIEDTASDAK Unmodified 1191.5255 0.52552585 1536 P48382 RFX5 DNA-binding protein RFX5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.16 20.29 2 7.0887E-06 20936 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 123.75 84.973 238440000 0 0 0 0 38098000 39421000 43290000 0 34616000 0 0 0 0 33585000 49429000 41147 1536 36782 342770;342771;342772;342773;342774;342775;342776;342777;342778;342779;342780;342781 271837;271838;271839;271840;271841;271842;271843;271844;271845;271846;271847;271848;271849 271848 13 QDIITLQDPTNLDK Unmodified 1612.8308 0.83081599 2274 Q13356 PPIL2 Peptidyl-prolyl cis-trans isomerase-like 2 yes yes 0 0 0 By matching By matching By matching By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 75.644 75.819 2 0.012763 87747 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 43.897 20.046 62874000 0 0 0 0 0 0 0 6630400 0 10082000 0 13095000 9690900 7186900 16189000 41148 2274 36783 342782;342783;342784;342785;342786;342787 271850 271850 1 QDILTIFK Unmodified 976.55933 0.55933258 4534 Q9NP61 ARFGAP3 ADP-ribosylation factor GTPase-activating protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 83.892 83.375 2 0.0067231 96457 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 98.458 67.169 262600000 0 17002000 1808600 7877400 8879600 17332000 0 16364000 14650000 23479000 33050000 30483000 27760000 20909000 43003000 41149 4534 36784 342788;342789;342790;342791;342792;342793;342794;342795;342796;342797;342798;342799;342800 271851;271852;271853;271854;271855;271856;271857;271858;271859;271860;271861 271859 11 QDIQTDNSDIFQETK Unmodified 1780.8115 0.81153711 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 57.059 57.276 2 5.6705E-05 65059 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 96.604 66.837 9965000 0 0 0 0 0 0 3014900 0 0 2957500 3992600 0 0 0 0 41150 2556 36785 342801;342802;342803;342804;342805;342806;342807 271862;271863;271864;271865;271866;271867;271868 271867 7 QDLADVVQVCEGK Unmodified 1459.6977 0.69769333 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 64.936 65.194 2 5.2078E-05 73739 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 108.35 65.041 40043000 0 0 0 0 0 5903500 0 0 3713200 0 4713800 8418400 4943800 5601300 6748900 41151 2392 36786 342808;342809;342810;342811;342812;342813;342814;342815;342816;342817 271869;271870;271871;271872;271873;271874;271875;271876;271877;271878 271875 10 QDLAQLMNSSGSHK Unmodified 1514.7147 0.71474038 4137 Q9BT78 COPS4 COP9 signalosome complex subunit 4 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 50.069 50.578 3 0.00025588 56060 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.529 54.317 46030000 0 0 0 0 0 0 0 0 0 0 0 0 13086000 0 32944000 41152 4137 36787 342818;342819 271879;271880 271879 2 QDLAYER Unmodified 893.4243 0.42429566 5084 Q9Y262 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 21.753 21.978 2 0.023368 21955 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.904 38.049 215130000 0 0 0 10573000 10600000 0 20274000 10655000 15136000 17866000 29594000 30557000 24806000 17392000 27677000 41153 5084 36788 342820;342821;342822;342823;342824;342825;342826;342827;342828;342829;342830 271881;271882 271881 2 QDLAYERQYEQQTYQVIPEVIK Unmodified 2740.3708 0.37081011 5084 Q9Y262 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 0 0 1 By MS/MS 3 0 1 1 84.58 81.346 3 0.010739 97516 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 28.178 15.864 2358300 0 2358300 0 0 0 0 0 0 0 0 0 0 0 0 0 41154 5084 36789 342831 271883 271883 1 QDLEAEVSQLTGEVAK Unmodified 1715.8578 0.85775902 417 O60610 DIAPH1 Protein diaphanous homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.8 2.76 2 2 21 4 2 2 2 2 2 2 2 2 1 2 2 86.274 85.718 2;3 0 105677 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 390.68 324.62 472840000 0 349520000 0 0 5256400 6766900 4599700 7545400 5816000 20646000 11554000 13201000 4308500 11582000 32042000 41155 417 36790 342832;342833;342834;342835;342836;342837;342838;342839;342840;342841;342842;342843;342844;342845;342846;342847;342848;342849;342850;342851;342852;342853;342854;342855;342856 271884;271885;271886;271887;271888;271889;271890;271891;271892;271893;271894;271895;271896;271897;271898;271899;271900;271901;271902 271890 18 QDLESSVQSSPHDSIAIIPPPQSTK Unmodified 2660.3293 0.32933923 2021 P98082 DAB2 Disabled homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.865 73.926 3 1.6357E-90 84984 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 132.26 120.41 432430000 0 0 0 16163000 15489000 43609000 23913000 20957000 32957000 45900000 36603000 37634000 26405000 42693000 90109000 41156 2021 36791 342857;342858;342859;342860;342861;342862;342863;342864;342865;342866;342867;342868 271903;271904;271905;271906;271907;271908;271909;271910;271911;271912;271913;271914;271915;271916;271917;271918;271919 271908 17 QDLESSVQSSPHDSIAIIPPPQSTKPGR Unmodified 2970.5047 0.50467783 2021 P98082 DAB2 Disabled homolog 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.028 70.104 4 2.3006E-14 80455 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.526 43.503 241150000 0 0 0 12436000 9749800 7234800 21207000 14045000 12029000 26688000 25166000 22989000 16763000 22572000 50268000 41157 2021 36792 342869;342870;342871;342872;342873;342874;342875;342876;342877;342878;342879;342880 271920;271921;271922;271923;271924;271925;271926;271927;271928;271929;271930;271931;271932;271933;271934;271935 271933 15 QDLFEPSSANTEDK Unmodified 1579.7002 0.70019575 2727 Q5H9R7 PPP6R3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 48.29 47.995 2 1.5473E-27 54181 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 157.68 141.48 129910000 0 27964000 0 7245500 4760700 7489800 4771500 5705900 5158500 10257000 14273000 8493300 8484600 10493000 14815000 41158 2727 36793 342881;342882;342883;342884;342885;342886;342887;342888;342889;342890;342891;342892;342893 271936;271937;271938;271939;271940;271941;271942;271943;271944;271945;271946;271947;271948 271945 13 QDLLAYLQR Unmodified 1118.6084 0.60840804 1340;1200 P35221;P26232 CTNNA1;CTNNA2 Catenin alpha-1;Catenin alpha-2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.861 81.911 2 0.0050696 95150 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 84.568 43.539 60163000 0 0 0 2728000 2588200 5900000 3662400 5562800 0 7794700 7447600 4928700 2391300 4443300 12716000 41159 1340;1200 36794 342894;342895;342896;342897;342898;342899;342900;342901;342902;342903;342904;342905 271949;271950;271951;271952;271953;271954;271955;271956;271957 271954 9 QDLLPADQAQVLNEMAK Unmodified 1882.9459 0.94586252 2962 Q6PL24 TMED8 Protein TMED8 yes yes 0 0 0 By MS/MS 2 0 1 1 86.942 82.133 2 0.00013313 102112 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.03 94.15 21586000 0 21586000 0 0 0 0 0 0 0 0 0 0 0 0 0 41160 2962 36795 342906 271958 271958 1 QDLPALEEK Unmodified 1041.5342 0.53424004 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.28 1 2 8 1 2 1 1 1 1 1 1 1 1 46.688 45.469 2 0.0074973 56978 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.936 65.632 633560000 437610 478290000 0 0 0 6480800 3119400 0 4315700 6651200 24527000 19825000 0 22218000 67703000 41161 1337 36796 342907;342908;342909;342910;342911;342912;342913;342914;342915;342916;342917 271959;271960;271961;271962;271963;271964;271965;271966;271967 271962 7 QDLPALEEKPR Unmodified 1294.6881 0.68811492 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 42.507 42.683 3 0.027558 46526 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.679 21.306 94541000 0 0 0 2721900 3127600 0 3672300 3502200 0 5233000 21897000 15784000 0 11650000 26954000 41162 1337 36797 342918;342919;342920;342921;342922;342923;342924;342925;342926 271968;271969 271968 2 QDLPDAMK Unmodified 916.43242 0.43241751 1897 P62330 ARF6 ADP-ribosylation factor 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.399 34.582 2 0.0074214 36889 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.698 66.679 86784000 0 0 0 3416400 3281700 13420000 2742200 4080000 6189000 7416400 12547000 7303600 5978900 4737900 15671000 41163 1897 36798 342927;342928;342929;342930;342931;342932;342933;342934;342935;342936;342937;342938 271970;271971;271972;271973 271971 4 QDLPDAMKPHEIQEK Oxidation (M) 1793.8618 0.86179854 1897 P62330 ARF6 ADP-ribosylation factor 6 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 2 2 1 2 2 1 1 2 2 2 2 30.028 30.234 3;4 1.4155E-14 32626 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 98.654 79.392 522870000 0 0 0 61971000 44813000 29639000 0 48655000 33107000 40366000 16316000 84292000 65112000 54833000 43767000 41164 1897 36799 342939;342940;342941;342942;342943;342944;342945;342946;342947;342948;342949;342950;342951;342952;342953;342954;342955;342956;342957 271974;271975;271976;271977;271978;271979;271980;271981;271982;271983;271984;271985;271986;271987;271988;271989 271983 3071 13 QDLPDAMKPHEIQEK Unmodified 1777.8669 0.86688392 1897 P62330 ARF6 ADP-ribosylation factor 6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 2 1 2 2 1 1 2 2 1 2 2 1 44.449 44.598 3;4 7.2747E-05 49215 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 72.662 50.719 536270000 0 0 0 46630000 19179000 53985000 48826000 24448000 21709000 59588000 91015000 43620000 43834000 43819000 39619000 41165 1897 36799 342958;342959;342960;342961;342962;342963;342964;342965;342966;342967;342968;342969;342970;342971;342972;342973;342974;342975;342976 271990;271991;271992;271993;271994;271995;271996;271997;271998;271999;272000 271996 7 QDLPNAMAISEMTDK 2 Oxidation (M) 1694.7491 0.74913655 1071 P18085 ARF4 ADP-ribosylation factor 4 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.72 1.46 1 28 1 3 3 2 3 2 2 2 3 2 2 2 2 52.606 52.483 2 2.3621E-20 59872 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 111.63 105.91 567900000 0 13917000 0 61675000 55209000 48078000 90314000 24631000 38720000 62804000 48620000 37426000 35851000 26151000 24506000 41166 1071 36800 342977;342978;342979;342980;342981;342982;342983;342984;342985;342986;342987;342988;342989;342990;342991;342992;342993;342994;342995;342996;342997;342998;342999;343000;343001;343002;343003;343004;343005 272001;272002;272003;272004;272005;272006;272007;272008;272009;272010;272011;272012;272013;272014;272015;272016;272017;272018;272019;272020;272021;272022;272023;272024;272025;272026 272019 1522;1523 25 QDLPNAMAISEMTDK Oxidation (M) 1678.7542 0.75422193 1071 P18085 ARF4 ADP-ribosylation factor 4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.58 1.72 1 1 34 2 3 3 3 3 3 1 3 3 3 3 3 3 69.328 69.158 2 2.4596E-39 87692 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.01 102.94 791050000 0 123650000 0 49128000 37877000 60495000 54261000 45398000 14861000 74295000 94998000 77784000 38875000 39911000 79521000 41167 1071 36800 343006;343007;343008;343009;343010;343011;343012;343013;343014;343015;343016;343017;343018;343019;343020;343021;343022;343023;343024;343025;343026;343027;343028;343029;343030;343031;343032;343033;343034;343035;343036;343037;343038;343039;343040;343041 272027;272028;272029;272030;272031;272032;272033;272034;272035;272036;272037;272038;272039;272040;272041;272042;272043;272044;272045;272046;272047;272048;272049;272050;272051;272052;272053;272054;272055;272056;272057;272058;272059;272060;272061;272062;272063;272064;272065 272036 1522;1523 38 QDLPNAMAISEMTDK Unmodified 1662.7593 0.75930731 1071 P18085 ARF4 ADP-ribosylation factor 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.06 3.36 3 1 12 4 1 1 1 1 1 1 1 1 1 1 1 1 78.554 77.739 2 5.6529E-27 89549 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 158.4 145.82 1896600000 0 1357100000 0 21654000 26214000 37431000 27747000 51864000 20664000 59996000 58495000 52232000 29972000 38164000 115080000 41168 1071 36800 343042;343043;343044;343045;343046;343047;343048;343049;343050;343051;343052;343053;343054;343055;343056;343057 272066;272067;272068;272069;272070;272071;272072;272073;272074;272075;272076;272077 272077 11 QDLPNAMNAAEITDK Oxidation (M) 1645.7618 0.76175015 2011 P84077;P61204 ARF1;ARF3 ADP-ribosylation factor 1;ADP-ribosylation factor 3 yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.43 3.14 5 1 24 2 3 1 2 2 2 2 2 2 2 2 2 2 2 2 52.699 51.59 2 1.18E-70 57846 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 179.98 113.79 2645500000 38507000 390670000 881370 206620000 140460000 161920000 228180000 163110000 159270000 208520000 236210000 192670000 173370000 139510000 205640000 41169 2011 36801 343058;343059;343060;343061;343062;343063;343064;343065;343066;343067;343068;343069;343070;343071;343072;343073;343074;343075;343076;343077;343078;343079;343080;343081;343082;343083;343084;343085;343086;343087 272078;272079;272080;272081;272082;272083;272084;272085;272086;272087;272088;272089;272090;272091;272092;272093;272094;272095;272096;272097;272098;272099;272100;272101;272102;272103;272104;272105;272106 272101 3263 29 QDLPNAMNAAEITDK Unmodified 1629.7668 0.76683553 2011 P84077;P61204 ARF1;ARF3 ADP-ribosylation factor 1;ADP-ribosylation factor 3 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.48 1 2 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 66.96 66.029 2;3 1.0071E-39 82639 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 142.1 129.48 3768300000 60998000 1705600000 0 115990000 87614000 158970000 142810000 143180000 90652000 193310000 214020000 214120000 127590000 169030000 344430000 41170 2011 36801 343088;343089;343090;343091;343092;343093;343094;343095;343096;343097;343098;343099;343100;343101;343102;343103 272107;272108;272109;272110;272111;272112;272113;272114;272115;272116;272117;272118;272119;272120;272121;272122;272123;272124;272125;272126;272127;272128 272112 21 QDLPSLDEK Unmodified 1043.5135 0.5135046 3633 Q92598 HSPH1 Heat shock protein 105 kDa yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 44.306 44.805 2 0.005264 49125 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.516 35.652 22519000 0 0 0 0 0 0 0 0 0 0 0 0 0 5522000 16997000 41171 3633 36802 343104;343105 272129;272130;272131 272129 3 QDLQGKITSLDTSTMR Unmodified 1792.8989 0.89891233 2551 Q15596 NCOA2 Nuclear receptor coactivator 2 yes yes 0 0 1 By MS/MS 10 0 1 1 75.762 75.979 3 0.012643 87811 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 23.138 0 9470000 0 0 0 0 0 0 0 0 0 0 9470000 0 0 0 0 41172 2551 36803 343106 272132 272132 1 QDLSAIAR Unmodified 872.47158 0.4715802 4863 Q9UBW8 COPS7A COP9 signalosome complex subunit 7a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 35.349 35.337 2 0.012232 39091 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 75.109 11.962 68047000 0 0 0 8147500 6118000 13603000 7446500 6134300 4778200 12036000 0 0 0 9783100 0 41173 4863 36804 343107;343108;343109;343110;343111;343112;343113;343114 272133;272134;272135;272136;272137 272133 5 QDLSAPPGYTLTENVAR Unmodified 1830.9112 0.91119158 5191 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 72.326 72.325 2 0.004142 83353 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 42.095 28.132 19496000 0 0 0 0 3738800 4865500 4360100 0 0 0 0 0 3148400 3383700 0 41174 5191 36805 343115;343116;343117;343118;343119;343120 272138;272139;272140;272141;272142 272138 5 QDLTTLDVTK Unmodified 1132.5976 0.59756858 1427 P41091;Q2VIR3 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.856 52.004 2 0.00067415 57583 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 121.73 85.338 965830000 0 0 0 55667000 56309000 93735000 52390000 58349000 43672000 82294000 97403000 127030000 83962000 91128000 123900000 41175 1427 36806 343121;343122;343123;343124;343125;343126;343127;343128;343129;343130;343131;343132 272143;272144;272145;272146;272147;272148;272149;272150;272151;272152;272153;272154;272155;272156 272146 14 QDLYPALK Unmodified 946.51238 0.51238239 2569 Q15738 NSDHL Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.502 52.645 2 0.012173 59818 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 75.243 44.682 190350000 0 0 0 11778000 15143000 15247000 13467000 16131000 10164000 21843000 18542000 25767000 15143000 12020000 15110000 41176 2569 36807 343133;343134;343135;343136;343137;343138;343139;343140;343141;343142;343143;343144 272157;272158;272159;272160;272161;272162;272163;272164 272158 7 QDMEQAMTSSEMANSLGLPALK 3 Oxidation (M) 2399.0655 0.065461667 1416 P40616 ARL1 ADP-ribosylation factor-like protein 1 yes yes 0 3 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 20 2 1 2 2 2 2 2 2 2 1 2 73.892 73.965 2;3 1.8753E-75 85311 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 133.66 133.06 325050000 0 0 0 31103000 4727600 35784000 43178000 27695000 32167000 42654000 34064000 42861000 4287200 0 26532000 41177 1416 36808 343145;343146;343147;343148;343149;343150;343151;343152;343153;343154;343155;343156;343157;343158;343159;343160;343161;343162;343163;343164 272165;272166;272167;272168;272169;272170;272171;272172;272173;272174;272175;272176;272177 272175 2223;2224;2225 13 QDMEQAMTSSEMANSLGLPALK Oxidation (M) 2367.0756 0.075632423 1416 P40616 ARL1 ADP-ribosylation factor-like protein 1 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS 6.12 3.89 3 1 4 4 1 1 2 85.543 83.353 2;3 3.3404E-101 104279 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 168.1 162.02 151760000 0 135340000 0 0 1363800 1734700 0 0 0 0 0 0 0 0 13319000 41178 1416 36808 343165;343166;343167;343168;343169;343170;343171;343172 272178;272179;272180;272181;272182 272180 2223;2224;2225 5 QDMEQAMTSSEMANSLGLPALK Unmodified 2351.0807 0.080717801 1416 P40616 ARL1 ADP-ribosylation factor-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS 4.67 3.77 2 1 2 1 91.198 87.974 2;3 1.6832E-51 109205 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 168.5 156.91 315850000 0 309860000 0 0 0 0 0 0 0 0 0 0 0 0 5991100 41179 1416 36808 343173;343174;343175 272183;272184;272185;272186 272184 3 QDMEQAMTSSEMANSLGLPALK 2 Oxidation (M) 2383.0705 0.070547045 1416 P40616 ARL1 ADP-ribosylation factor-like protein 1 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 81.148 81.317 3 2.4509E-07 93734 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.457 45.748 44286000 0 0 0 0 0 0 0 0 0 0 8183200 12899000 0 7430200 15774000 41180 1416 36808 343176;343177;343178;343179 272187;272188;272189;272190;272191 272187 2223;2224;2225 5 QDMPNAMPVSELTDK Oxidation (M) 1690.7542 0.75422193 2012 P84085 ARF5 ADP-ribosylation factor 5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.64 1.67 1 21 1 1 1 2 2 2 2 2 2 2 2 1 2 60.434 60.601 2 5.9763E-15 66720 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 103.44 94.435 235350000 0 0 0 10801000 8263300 22070000 21141000 16051000 14095000 27769000 28228000 26274000 18161000 9668900 32827000 41181 2012 36809 343180;343181;343182;343183;343184;343185;343186;343187;343188;343189;343190;343191;343192;343193;343194;343195;343196;343197;343198;343199;343200;343201 272192;272193;272194;272195;272196;272197;272198;272199;272200;272201;272202;272203;272204;272205;272206;272207;272208;272209;272210;272211;272212;272213;272214 272200 3265;3266 23 QDMPNAMPVSELTDK Unmodified 1674.7593 0.75930731 2012 P84085 ARF5 ADP-ribosylation factor 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 72.659 72.352 2 1.8954E-59 83131 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 176.51 165.41 476380000 0 100860000 0 21555000 17915000 29345000 21857000 34374000 15695000 39741000 47943000 32865000 18320000 28917000 67001000 41182 2012 36809 343202;343203;343204;343205;343206;343207;343208;343209;343210;343211;343212;343213;343214 272215;272216;272217;272218;272219;272220;272221;272222;272223;272224;272225;272226;272227;272228;272229;272230 272223 16 QDMPNAMPVSELTDK 2 Oxidation (M) 1706.7491 0.74913655 2012 P84085 ARF5 ADP-ribosylation factor 5 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 47.866 48.038 2 2.6213E-07 54615 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 85.288 75.335 171860000 0 0 0 14896000 13648000 0 21037000 9177800 12811000 16666000 19461000 20763000 16804000 9923800 16674000 41183 2012 36809 343215;343216;343217;343218;343219;343220;343221;343222;343223;343224;343225 272231;272232;272233;272234;272235;272236;272237;272238;272239;272240;272241 272240 3265;3266 11 QDNCVHDLQAHNK Unmodified 1577.7005 0.7004873 4270 Q9BZK7 TBL1XR1 F-box-like/WD repeat-containing protein TBL1XR1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 13.959 13.614 3 0.00037322 17554 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.338 79.741 224630000 0 14266000 44182000 7106400 10257000 10393000 9080800 8247100 0 0 23294000 30961000 20108000 18229000 28502000 41184 4270 36810 343226;343227;343228;343229;343230;343231;343232;343233;343234;343235;343236;343237 272242;272243;272244;272245;272246;272247;272248;272249;272250;272251;272252;272253;272254 272246 11 QDNESNVDPRDDVFGYPQQFEDKPALSK Unmodified 3237.4851 0.4850646 3701 Q93008 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 0 0 2 By MS/MS 2 0 1 1 78.599 75.971 4 0.012718 92338 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 22.081 18.43 5463800 0 0 5463800 0 0 0 0 0 0 0 0 0 0 0 0 41185 3701 36811 343238 272255 272255 1 QDNLDAFNERDPYK Unmodified 1723.7802 0.7801774 2806 Q5VSL9 STRIP1 Striatin-interacting protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 52.113 52.017 3 0.044117 58320 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 17.064 3.3475 33449000 0 0 0 4268700 2747600 0 5306200 0 7105900 6710000 0 0 0 7310600 0 41186 2806 36812 343239;343240;343241;343242;343243;343244 272256 272256 1 QDPDTWENELPVSK Unmodified 1656.7631 0.76313036 3699 Q92995 USP13 Ubiquitin carboxyl-terminal hydrolase 13 yes yes 0 0 0 By MS/MS 2 0 1 1 76.379 71.541 2 0.0019551 89323 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.02 76.288 42558000 0 42558000 0 0 0 0 0 0 0 0 0 0 0 0 0 41187 3699 36813 343245 272257 272257 1 QDPGTDRTEDSGLAAGPPEAAGENFAPCSVAPGK Unmodified 3368.5215 0.52152646 3781 Q96CP2 FLYWCH2 FLYWCH family member 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 36 3 3 3 3 3 3 3 3 3 3 3 3 73.292 73.355 3;4 3.634E-69 82732 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 90.098 84.438 3001100000 0 0 0 175800000 280670000 227530000 219020000 213710000 167910000 280600000 304740000 319440000 221470000 206460000 383710000 41188 3781 36814 343246;343247;343248;343249;343250;343251;343252;343253;343254;343255;343256;343257;343258;343259;343260;343261;343262;343263;343264;343265;343266;343267;343268;343269;343270;343271;343272;343273;343274;343275;343276;343277;343278;343279;343280;343281 272258;272259;272260;272261;272262;272263;272264;272265;272266;272267;272268;272269;272270;272271;272272;272273;272274;272275;272276;272277;272278;272279;272280;272281;272282;272283;272284;272285;272286;272287;272288;272289;272290;272291;272292 272263 30 QDPPSVVVTSHQAPGEK Unmodified 1774.885 0.88497683 1185 P25311 AZGP1 Zinc-alpha-2-glycoprotein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 39.419 39.604 3 3.538E-41 44592 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 119.23 100.5 133540000 0 0 0 40314000 8012700 6989800 7040200 8856300 0 13085000 13452000 13221000 9929300 5000100 7641700 41189 1185 36815 343282;343283;343284;343285;343286;343287;343288;343289;343290;343291;343292 272293;272294;272295;272296;272297;272298;272299;272300;272301;272302;272303;272304 272303 12 QDPPVIHELR Unmodified 1202.6408 0.6407708 4868 Q9UDY4 DNAJB4 DnaJ homolog subfamily B member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 46.064 46.245 3 0.0034502 50687 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.01 49.767 140440000 0 0 0 8664900 5385600 0 9308400 15150000 0 12839000 15633000 14354000 11214000 15895000 31994000 41190 4868 36816 343293;343294;343295;343296;343297;343298;343299;343300;343301;343302 272305;272306;272307;272308;272309;272310;272311;272312;272313;272314;272315;272316 272308 11 QDPPVTHDLR Unmodified 1176.5887 0.58873523 1191 P25685 DNAJB1 DnaJ homolog subfamily B member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 26.223 26.402 3 0.016981 28386 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 37.681 28.359 38129000 0 0 0 0 2340700 3750500 4363100 3085500 2957500 5926300 5660500 5335200 0 4709800 0 41191 1191 36817 343303;343304;343305;343306;343307;343308;343309;343310;343311 272317;272318 272317 2 QDPQPGDVSPSNITHVDK Unmodified 1932.9177 0.91773352 2301 Q13495 MAMLD1 Mastermind-like domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 49.211 48.975 3 0.0047008 55800 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 33.918 23.542 15829000 0 0 0 0 7589700 0 8238800 0 0 0 0 0 0 0 0 41192 2301 36818 343312;343313 272319;272320 272320 2 QDPSVLHTEEMR Unmodified 1440.6667 0.66672755 1625 P50502;Q8NFI4 ST13;ST13P5 Hsc70-interacting protein;Putative protein FAM10A5 yes no 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 1 1 2 1 1 2 2 2 2 2 2 38.223 38.484 2;3 9.193E-24 41551 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 168.46 129.69 748550000 0 0 0 30355000 23065000 23704000 29008000 28741000 18156000 55176000 113770000 114410000 38883000 80652000 192630000 41193 1625 36819 343314;343315;343316;343317;343318;343319;343320;343321;343322;343323;343324;343325;343326;343327;343328;343329;343330;343331;343332 272321;272322;272323;272324;272325;272326;272327;272328;272329;272330;272331 272325 5 QDPSYYLK Unmodified 1012.4866 0.48656157 2274 Q13356 PPIL2 Peptidyl-prolyl cis-trans isomerase-like 2 yes yes 0 0 0 By MS/MS 2 0 1 1 47.92 42.357 2 0.034949 55152 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.789 45.264 19404000 0 19404000 0 0 0 0 0 0 0 0 0 0 0 0 0 41194 2274 36820 343333 272332 272332 1 QDPVYIPPISCNK Unmodified 1529.7548 0.75481428 2346 Q13835 PKP1 Plakophilin-1 yes yes 0 0 0 By MS/MS 10 0 1 1 71.907 71.305 2 0.0052383 82503 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 63.694 55.474 9196800 0 0 0 9196800 0 0 0 0 0 0 0 0 0 0 0 41195 2346 36821 343334 272333 272333 1 QDQISGLSQSEVK Unmodified 1417.7049 0.7048872 4030 Q99590 SCAF11 Protein SCAF11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 42.083 42.698 2 1.2213E-12 46737 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 154.15 106.28 59580000 0 0 0 0 0 0 0 0 0 0 0 24032000 16741000 0 18807000 41196 4030 36822 343335;343336;343337;343338 272334;272335;272336;272337 272334 4 QDQQQLDRPFNR Unmodified 1543.7492 0.74915205 3631 Q92576 PHF3 PHD finger protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 33.342 33.529 3 0.0016885 36721 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 62.924 55.115 63946000 0 0 0 4575100 4695800 6262600 3932200 0 4524000 5814400 8178500 8599600 7539300 5228300 4595900 41197 3631 36823 343339;343340;343341;343342;343343;343344;343345;343346;343347;343348;343349 272338;272339;272340;272341;272342;272343;272344;272345 272339 7 QDQSPSLR Unmodified 929.45666 0.45665842 1739;2856 P54278;Q68D20 PMS2;PMS2CL Mismatch repair endonuclease PMS2;Protein PMS2CL no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 13.886 14.022 2 0.0087284 13331 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 85.212 24.424 68567000 0 0 0 3552800 6670700 6934700 6491500 5461800 4599500 0 7250700 12262000 8353100 6991100 0 41198 1739;2856 36824 343350;343351;343352;343353;343354;343355;343356;343357;343358;343359;343360 272346;272347;272348;272349;272350;272351;272352;272353;272354;272355 272355 10 QDQVCIAR Unmodified 988.47601 0.47601365 1014 P15170;Q8IYD1 GSPT1;GSPT2 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A;Eukaryotic peptide chain release factor GTP-binding subunit ERF3B yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 23.957 24.155 2 0.006821 25867 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 95.352 57.219 99726000 0 0 0 6434400 6024000 0 0 10265000 3791300 11469000 8831400 0 11037000 18829000 23045000 41199 1014 36825 343361;343362;343363;343364;343365;343366;343367;343368;343369 272356;272357;272358;272359;272360;272361;272362;272363;272364;272365;272366;272367 272366 12 QDRLNQTLK Unmodified 1114.6095 0.60947067 686 O95757 HSPA4L Heat shock 70 kDa protein 4L yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 22.416 18.527 2 0.03112 23461 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 111.61 111.61 140130000 112420000 0 27711000 0 0 0 0 0 0 0 0 0 0 0 0 41200 686 36826 343370;343371 272368 272368 1 QDRTLTIVDTGIGMTK Unmodified 1747.9138 0.91383411 850;2717 P07900;Q58FG1 HSP90AA1;HSP90AA4P Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A4 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5 3.89 1 8 1 6 3 4 3 1 1 1 1 1 1 78.206 75.963 2;3 1.6774E-57 90070 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 210.14 146.73 1211400000 319380000 469760000 258630000 0 0 17619000 0 8554100 0 15071000 0 29998000 0 13357000 79013000 41201 850;2717 36827 343372;343373;343374;343375;343376;343377;343378;343379;343380;343381;343382;343383;343384;343385;343386;343387 272369;272370;272371;272372;272373;272374;272375;272376;272377;272378;272379;272380;272381;272382;272383;272384 272381 14 QDRTLTIVDTGIGMTK Oxidation (M) 1763.9087 0.90874874 850;2717 P07900;Q58FG1 HSP90AA1;HSP90AA4P Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A4 no no 0 1 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.73 3.91 5 1 5 2 2 2 1 1 1 1 1 66.87 63.872 2;3 2.885E-05 71691 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.548 71.446 979260000 21780000 256860000 560020000 0 0 0 32207000 0 0 25388000 28905000 0 0 14091000 40007000 41202 850;2717 36827 343388;343389;343390;343391;343392;343393;343394;343395;343396;343397;343398 272385;272386;272387;272388;272389;272390;272391;272392;272393 272387 1073 7 QDRVYPELQR Unmodified 1302.668 0.66804818 2823 Q5VW36 FOCAD Focadhesin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 36.278 36.447 3 0.0025797 40753 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 60.167 52.321 91264000 0 0 0 9218900 9554000 14171000 9190400 6875700 8211800 10311000 3544100 8728300 4153300 0 7304700 41203 2823 36828 343399;343400;343401;343402;343403;343404;343405;343406;343407;343408;343409 272394;272395;272396;272397;272398;272399;272400 272399 6 QDSAAVGFDYK Unmodified 1199.5459 0.54586736 2399 Q14247 CTTN Src substrate cortactin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 46.839 47.022 2 0.0061921 52678 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 57.174 30.385 60681000 0 0 0 0 5203800 4125400 6272500 3390000 5757000 7363800 7887300 0 7202200 5355700 8123400 41204 2399 36829 343410;343411;343412;343413;343414;343415;343416;343417;343418;343419 272401;272402;272403 272402 3 QDSFYTLK Unmodified 1000.4866 0.48656157 2336 Q13636 RAB31 Ras-related protein Rab-31 yes yes 0 0 0 By MS/MS 10 0 1 1 50.23 50.395 2 0.043878 56905 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 49.097 30.291 8124300 0 0 0 0 0 0 0 8124300 0 0 0 0 0 0 0 41205 2336 36830 343420 272404 272404 1 QDSLESMK Unmodified 936.42225 0.42224675 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 22.694 22.893 2 0.015746 23854 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 68.383 53.97 41906000 0 0 0 7541200 2305600 2695300 1944800 9708800 0 3464300 3566000 3808500 3923400 0 2948000 41206 1029 36831 343421;343422;343423;343424;343425;343426;343427;343428;343429;343430 272405;272406;272407 272406 3 QDSLESMK Oxidation (M) 952.41716 0.41716137 1029 P15924 DSP Desmoplakin yes yes 0 1 0 By matching By MS/MS By matching By matching By matching 10 0 5 1 1 1 1 1 8.0805 8.1987 2 0.0061416 6275 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 83.265 71.543 15037000 0 0 0 0 1665000 0 0 5107400 0 2677300 0 3495000 2092800 0 0 41207 1029 36831 343431;343432;343433;343434;343435 272408 272408 1441 1 QDSLLLLSQR Unmodified 1171.6561 0.65608651 488 O75376 NCOR1 Nuclear receptor corepressor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.359 73.427 2 0.0031171 83894 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.662 47.496 285290000 0 0 0 25969000 16297000 30678000 17793000 27488000 20260000 28231000 23887000 31538000 18047000 17015000 28088000 41208 488 36832 343436;343437;343438;343439;343440;343441;343442;343443;343444;343445;343446;343447 272409;272410;272411;272412;272413;272414;272415;272416;272417 272411 9 QDSLVINLNR Unmodified 1170.6357 0.63568542 5231 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 65.705 65.888 2 0.010982 75456 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 70.747 44.291 79670000 0 0 0 0 7386500 0 7951700 6836200 0 0 9292500 12365000 10405000 11761000 13673000 41209 5231 36833 343448;343449;343450;343451;343452;343453;343454;343455 272418;272419 272418 2 QDSSTGSYSINFVQNPNNNR Unmodified 2241.0047 0.0046510456 4034 Q99614 TTC1 Tetratricopeptide repeat protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 2 2 4 69.68 64.441 2;3 5.687E-05 82352 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 63.76 58.332 84207000 0 84207000 0 0 0 0 0 0 0 0 0 0 0 0 0 41210 4034 36834 343456;343457;343458;343459 272420;272421 272421 2 QDSTAPSSTSSSDPILDFNISLAMAK Oxidation (M) 2698.2644 0.26435571 209 O14745 SLC9A3R1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 94.274 90.227 3 1.5685E-08 111998 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.361 62.827 31773000 0 31773000 0 0 0 0 0 0 0 0 0 0 0 0 0 41211 209 36835 343460;343461 272422 272422 279 1 QDTEEDEEEDEK Unmodified 1494.5482 0.54817136 5087 Q9Y266 NUDC Nuclear migration protein nudC yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 7.3331 7.4623 2 6.8407E-34 5550 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 173.24 154.56 83175000 0 0 0 3104600 1710700 12243000 4348900 2922600 3762200 7155000 14892000 5007300 6658100 7668800 13701000 41212 5087 36836 343462;343463;343464;343465;343466;343467;343468;343469;343470;343471;343472;343473;343474 272423;272424;272425;272426;272427;272428;272429;272430;272431;272432;272433;272434;272435 272429 13 QDTFSGTGFFPLDRETK Unmodified 1944.9218 0.92175626 5198 Q9Y4E8 USP15 Ubiquitin carboxyl-terminal hydrolase 15 yes yes 0 0 1 By MS/MS By matching By matching 10 0 3 1 1 1 79.54 79.671 3 0.014242 92068 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 30.536 26.932 15888000 0 0 0 0 0 7944600 0 3680200 0 0 4263600 0 0 0 0 41213 5198 36837 343475;343476;343477 272436 272436 1 QDTITEESEK Unmodified 1178.5303 0.53027687 602 O94913 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.683 14.851 2 0.00089027 14543 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 117.53 80.334 66640000 0 0 0 4672400 3276100 3018400 4788300 2683500 4128700 5774100 5571100 9988900 5204400 6208100 11326000 41214 602 36838 343478;343479;343480;343481;343482;343483;343484;343485;343486;343487;343488;343489 272437;272438;272439;272440;272441;272442;272443;272444;272445;272446;272447 272444 11 QDTLVALR Unmodified 914.51853 0.5185304 3998 Q96T51 RUFY1 RUN and FYVE domain-containing protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 49.784 49.783 2 0.017693 56345 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 65.252 0 107560000 0 0 0 16607000 0 18297000 18202000 19431000 11677000 23344000 0 0 0 0 0 41215 3998 36839 343490;343491;343492;343493;343494;343495 272448;272449 272449 2 QDTSSSTTHLAQQLK Unmodified 1643.8115 0.81147753 4577 Q9NQW6 ANLN Actin-binding protein anillin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 34.881 35.019 3 0.00010917 37408 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 70.373 59.267 243920000 0 0 0 21245000 13051000 41011000 22318000 16747000 0 32060000 0 37674000 0 17646000 42165000 41216 4577 36840 343496;343497;343498;343499;343500;343501;343502;343503;343504 272450;272451;272452;272453;272454;272455 272452 6 QDTTLNELQEQLK Unmodified 1558.7839 0.7838658 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 72.595 72.67 2 0.00061854 83753 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 75.695 57.831 9989900 0 0 0 0 0 5703300 0 0 4286600 0 0 0 0 0 0 41217 2291 36841 343505;343506 272456;272457 272456 2 QDVCQSYSEK Unmodified 1242.5187 0.51866633 4425 Q9H6T3 RPAP3 RNA polymerase II-associated protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 15.901 15.995 2 0.0087853 14831 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.657 54.5 20102000 0 0 0 0 968200 5513800 3335100 0 0 0 0 0 0 2964000 7321400 41218 4425 36842 343507;343508;343509;343510;343511 272458;272459;272460 272460 3 QDVDDEYGVSQALAR Unmodified 1664.7642 0.76419299 1656 P51532 SMARCA4 Transcription activator BRG1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 62.012 62.093 2 7.886E-27 70354 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 129.84 109.55 48092000 0 0 0 3222000 3752900 6409500 0 3627400 0 5144000 6120900 5582500 0 5560900 8672300 41219 1656 36843 343512;343513;343514;343515;343516;343517;343518;343519;343520;343521;343522 272461;272462;272463;272464;272465;272466;272467;272468;272469;272470;272471;272472;272473 272465 13 QDVDNASLAR Unmodified 1087.5258 0.52580062 870 P08670 VIM Vimentin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 2 1 1 22.008 22.225 2 2.2413E-20 22127 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 189.7 154.89 3903500000 0 0 0 220910000 213650000 303610000 329900000 192780000 214220000 354330000 431830000 584230000 344580000 299960000 413460000 41220 870 36844 343523;343524;343525;343526;343527;343528;343529;343530;343531;343532;343533;343534;343535 272474;272475;272476;272477;272478;272479;272480;272481;272482;272483;272484;272485 272481 4 QDVIEVIEK Unmodified 1071.5812 0.58119023 1179 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 0 0 0 By MS/MS 2 0 1 1 67.355 61.439 2 0.010582 78380 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.862 59.066 47636000 0 47636000 0 0 0 0 0 0 0 0 0 0 0 0 0 41221 1179 36845 343536 272486 272486 1 QDVLGPSTTPPAHSSSNTIR Unmodified 2064.0236 0.023595574 2977 Q6UVJ0 SASS6 Spindle assembly abnormal protein 6 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 43.752 43.84 3 5.7343E-37 49019 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 105.77 94.666 146570000 0 0 0 10061000 8351900 13769000 17006000 13533000 9224000 26936000 0 0 19708000 10858000 17129000 41222 2977 36846 343537;343538;343539;343540;343541;343542;343543;343544;343545;343546;343547 272487;272488;272489;272490;272491;272492;272493;272494;272495;272496;272497;272498;272499;272500 272495 14 QDVPGPASSGAAAASAHAADWNK Unmodified 2178.009 0.009008142 4264 Q9BZF9 UACA Uveal autoantigen with coiled-coil domains and ankyrin repeats yes yes 0 0 0 By MS/MS 2 0 1 1 91.085 82.955 3 0.027733 107620 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 20.891 11.949 53820000 53820000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41223 4264 36847 343548 272501 272501 1 QDVPKPVLTSVMVPK Oxidation (M) 1652.9171 0.91712858 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 68.209 68.296 3 8.4644E-06 78215 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 77.633 68.096 121150000 0 0 0 12828000 0 0 19057000 11580000 0 18983000 18790000 24311000 15601000 0 0 41224 4139 36848 343549;343550;343551;343552;343553;343554;343555 272502;272503;272504;272505;272506;272507;272508 272503 5631 7 QDVPKPVLTSVMVPK Unmodified 1636.9222 0.92221396 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.404 74.467 3 0.023071 85826 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 30.172 26.536 115050000 0 0 0 5661500 7503800 3284800 9065800 11605000 8151700 9844500 14785000 12226000 5191600 10529000 17206000 41225 4139 36848 343556;343557;343558;343559;343560;343561;343562;343563;343564;343565;343566;343567 272509;272510;272511;272512 272511 4 QDVPSSLEDALK Unmodified 1300.6511 0.65106071 1636 P50748 KNTC1 Kinetochore-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 73.013 72.27 2 6.3203E-05 89067 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.568 57.378 92711000 0 58969000 0 4859600 3301700 0 4442500 0 0 9062200 6291200 0 5785500 0 0 41226 1636 36849 343568;343569;343570;343571;343572;343573;343574;343575;343576;343577;343578 272513;272514;272515;272516;272517;272518;272519;272520;272521;272522;272523 272515 11 QDVSPSPALAPAPDSVEQLRK Unmodified 2204.1437 0.14371071 3516 Q8TEH3 DENND1A DENN domain-containing protein 1A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.17 67.25 3 6.1468E-54 76447 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 121.48 111.49 283280000 0 0 0 15661000 18396000 23618000 19623000 23893000 20638000 23781000 29515000 27260000 30299000 22864000 27735000 41227 3516 36850 343579;343580;343581;343582;343583;343584;343585;343586;343587;343588;343589;343590 272524;272525;272526;272527;272528;272529;272530;272531;272532;272533;272534;272535 272527 12 QDVVLNYPM Unmodified 1077.5165 0.51648149 2481 Q15029 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.172 79.22 2 0.028187 91592 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 49.097 37.328 79975000 0 0 0 4481100 5283100 5891400 4820400 0 4927400 5875900 10215000 11274000 7230000 7806300 12171000 41228 2481 36851 343591;343592;343593;343594;343595;343596;343597;343598;343599;343600;343601 272536;272537 272536 2 QDVVNWLNEEK Unmodified 1372.6623 0.6622941 5051 Q9UPN7 PPP6R1 Serine/threonine-protein phosphatase 6 regulatory subunit 1 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 73.464 73.642 2 0.03473 84382 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.202 38.471 18896000 0 0 0 0 0 11446000 0 0 0 0 0 0 0 0 7449800 41229 5051 36852 343602;343603 272538 272538 0 QDVYDLLK Unmodified 992.51786 0.51786169 4011 Q99460 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 72.288 72.316 2 0.014972 83352 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 69.628 36.232 342410000 0 0 0 24711000 35252000 35941000 12606000 16256000 7831800 55040000 64277000 80330000 10165000 0 0 41230 4011 36853 343604;343605;343606;343607;343608;343609;343610;343611;343612;343613 272539;272540;272541 272541 2 QDVYGPQPQVR Unmodified 1285.6415 0.64149908 426 O60716 CTNND1 Catenin delta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.65 36.831 2 0.00026218 41212 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 91.318 65.759 61377000 0 0 0 4563900 3678500 5941000 4940700 4113600 3269200 4579800 5551100 6403200 5866800 4101000 8368300 41231 426 36854 343614;343615;343616;343617;343618;343619;343620;343621;343622;343623;343624;343625 272542;272543;272544;272545;272546;272547;272548;272549;272550;272551;272552;272553 272552 12 QDVYLLPK Unmodified 974.54368 0.54368251 377;3868 O43865;Q96HN2 AHCYL1;AHCYL2 Putative adenosylhomocysteinase 2;Putative adenosylhomocysteinase 3 no no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.42 1.93 1 11 1 1 1 1 1 1 1 1 1 1 1 1 60.306 60.062 2 0.010265 73810 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 113.14 91.434 194620000 0 14916000 0 1314900 0 18492000 10380000 10604000 12121000 17330000 25244000 16787000 16717000 17474000 33237000 41232 377;3868 36855 343626;343627;343628;343629;343630;343631;343632;343633;343634;343635;343636;343637 272554;272555 272555 1 QDWVDGEPTEAEK Unmodified 1502.6525 0.65251728 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 44.917 44.162 2 4.2888E-33 49115 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 169.52 156.94 467290000 15603000 66565000 0 18824000 16708000 27418000 22318000 20975000 27573000 29514000 33045000 54588000 26364000 35874000 71916000 41233 1986 36856 343638;343639;343640;343641;343642;343643;343644;343645;343646;343647;343648;343649;343650;343651;343652 272556;272557;272558;272559;272560;272561;272562;272563;272564;272565;272566;272567;272568;272569;272570;272571;272572;272573;272574;272575;272576;272577;272578;272579 272562 24 QDYLNGAVSGSVQATDR Unmodified 1779.8388 0.83875492 3122 Q7Z7E8 UBE2Q1 Ubiquitin-conjugating enzyme E2 Q1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 33.487 33.821 3 0.035962 37035 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 15.193 7.7846 50092000 0 0 0 0 0 0 0 6709400 6315100 0 0 14105000 10703000 12260000 0 41234 3122 36857 343653;343654;343655;343656;343657 272580 272580 1 QEAAASLVTSTVGQQNGSVVR Unmodified 2101.0764 0.076359426 1663 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 1 2 2 2 1 2 2 2 2 1 68.816 68.88 2;3 1.1148E-20 79041 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 124.62 111.64 122690000 0 0 0 9380100 8720700 5444200 11862000 9616100 5475300 10300000 14195000 18908000 11452000 8790300 8541600 41235 1663 36858 343658;343659;343660;343661;343662;343663;343664;343665;343666;343667;343668;343669;343670;343671;343672;343673;343674;343675;343676;343677;343678 272581;272582;272583;272584;272585;272586;272587;272588;272589;272590;272591;272592;272593;272594;272595;272596 272592 16 QEAADAALR Unmodified 943.47231 0.47230849 1766 P55265 ADAR Double-stranded RNA-specific adenosine deaminase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.651 18.848 2 0.010678 18663 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 63.961 9.3491 64165000 0 0 0 2094800 3977600 4178800 4966700 3507300 3966000 5048900 6611500 6437700 6786300 5475300 11114000 41236 1766 36859 343679;343680;343681;343682;343683;343684;343685;343686;343687;343688;343689;343690 272597;272598;272599;272600;272601;272602;272603;272604 272603 6 QEAATLAANNTQLQAR Unmodified 1698.8649 0.86491009 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 43.894 44.02 2 2.1377E-07 49709 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 103.75 83.989 36480000 0 0 0 0 3843800 0 5761000 6344300 0 4909100 0 0 0 0 15622000 41237 2459 36860 343691;343692;343693;343694;343695;343696 272605;272606;272607 272607 3 QEAELGEPDPEQK Unmodified 1468.6682 0.66816734 2990 Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 32.709 32.839 2 0.00070274 35783 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 72.434 60.72 20799000 0 0 0 0 4317500 0 3929400 2336300 2483300 3935700 0 0 0 0 3796700 41238 2990 36861 343697;343698;343699;343700;343701;343702;343703 272608;272609;272610;272611 272610 4 QEAENQQLADAVLAGR Unmodified 1711.8489 0.84892567 2917 Q6P1K2 PMF1 Polyamine-modulated factor 1 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 70.181 70.47 2 0.0051835 80475 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.301 44.672 5896700 0 0 0 0 0 0 0 0 0 2596400 0 0 0 0 3300300 41239 2917 36862 343704;343705 272612 272612 0 QEAFLLNEDLGDSLDSVEALLK Unmodified 2418.2166 0.21660088 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 1 3 102.31 97.063 2 5.6867E-57 119630 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 179.14 170.97 53091000 6770300 46321000 0 0 0 0 0 0 0 0 0 0 0 0 0 41240 2344 36863 343706;343707;343708;343709 272613;272614;272615;272616 272614 3 QEAFSIR Unmodified 849.43447 0.43446642 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.438 39.617 2 0.029096 43580 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 75.972 40.339 989780000 0 0 0 225460000 57266000 46443000 57582000 218830000 45507000 55851000 82044000 51762000 80237000 36209000 32592000 41241 1029 36864 343710;343711;343712;343713;343714;343715;343716;343717;343718;343719;343720;343721 272617 272617 1 QEAGDSPPPAPGTPK Unmodified 1447.6943 0.69432251 1607 P49848 TAF6 Transcription initiation factor TFIID subunit 6 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 26.884 26.926 2 0.012632 28724 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 36.447 24.24 17584000 0 0 0 6290600 1738500 1980900 0 0 0 0 4697100 0 0 2877200 0 41242 1607 36865 343722;343723;343724;343725;343726;343727 272618;272619;272620 272618 3 QEAGISEGQGTAGEEEEK Unmodified 1847.8021 0.80209464 343 O43583 DENR Density-regulated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 24.189 23.964 2 2.8658E-145 24531 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 209.11 182.14 84256000 6644800 0 0 2695400 1851300 4480200 2731900 2915200 2173200 2951000 10177000 13603000 3367100 8438600 22228000 41243 343 36866 343728;343729;343730;343731;343732;343733;343734;343735;343736;343737;343738;343739;343740 272621;272622;272623;272624;272625;272626;272627;272628;272629;272630;272631;272632 272624 12 QEAIPDEVIK Unmodified 1140.6027 0.60265396 1006 P14735 IDE Insulin-degrading enzyme yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 56.234 53.985 2 0.0080657 60524 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.042 49.302 142250000 7260700 95475000 0 24193000 0 0 0 0 0 0 5290400 0 0 3244200 6791000 41244 1006 36867 343741;343742;343743;343744;343745;343746 272633;272634;272635 272633 3 QEAIPDEVIKK Unmodified 1268.6976 0.69761697 1006 P14735 IDE Insulin-degrading enzyme yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.55 3.8 3 2 6 4 1 2 1 1 1 1 45.83 43.645 2;3 0.00014446 54217 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 104.82 85.084 394230000 0 280170000 4847600 64570000 0 0 0 3606500 0 0 11675000 8235300 0 0 21124000 41245 1006 36868 343747;343748;343749;343750;343751;343752;343753;343754;343755;343756;343757 272636;272637;272638;272639;272640 272638 3 QEAKPEAFVLSPLEMSST Oxidation (M) 1978.9558 0.95575851 2427 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 82.733 82.346 2 5.2182E-69 101777 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 169.89 140.55 97244000 0 58062000 0 1852500 2906100 2849100 3014600 2272200 2953300 4444800 4405700 7340900 0 0 7143100 41246 2427 36869 343758;343759;343760;343761;343762;343763;343764;343765;343766;343767;343768 272641;272642 272641 3985 2 QEAKPEAFVLSPLEMSST Unmodified 1962.9608 0.96084389 2427 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 92.551 87.64 2 0.0036916 108788 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.663 73.742 73043000 0 73043000 0 0 0 0 0 0 0 0 0 0 0 0 0 41247 2427 36869 343769 272643 272643 1 QEALIESLCEK Unmodified 1318.6439 0.64386684 3046 Q7L2H7 EIF3M Eukaryotic translation initiation factor 3 subunit M yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 64.327 64.542 2 0.0012794 73938 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 73.841 61.794 37083000 0 0 0 0 0 5653800 0 0 3970000 3524800 6466100 0 5977300 4319400 7171100 41248 3046 36870 343770;343771;343772;343773;343774;343775;343776 272644;272645;272646;272647;272648;272649 272644 6 QEALQPEPEPVPAPQLLLGPQGPSLIK Unmodified 2845.5589 0.55894523 3728 Q969V6 MKL1 MKL/myocardin-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 94.605 94.738 3 0.00058472 110092 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 16.977 16.057 2487300 0 0 0 0 0 0 0 0 0 1153000 0 0 0 0 1334300 41249 3728 36871 343777;343778 272650;272651;272652 272650 3 QEANHLQGSDGQQSVK Unmodified 1724.8078 0.80778914 4900 Q9UHF7 TRPS1 Zinc finger transcription factor Trps1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 12.946 12.587 3 0.0016697 11495 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 36.193 17.597 59183000 0 22468000 0 2940100 3077100 2546400 2735700 2195200 2805700 3448300 2816900 3877000 4567100 2302600 3402900 41250 4900 36872 343779;343780;343781;343782;343783;343784;343785;343786;343787;343788;343789;343790;343791;343792 272653;272654;272655;272656;272657;272658 272656 6 QEAQAGPWPFSSSQTQPAVR Unmodified 2171.0396 0.039579989 2021 P98082 DAB2 Disabled homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 76.62 76.678 2;3 1.7522E-66 88512 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 107.41 98.313 490630000 0 0 0 20555000 19803000 27627000 30848000 26200000 35836000 51801000 41487000 47246000 38290000 43062000 107870000 41251 2021 36873 343793;343794;343795;343796;343797;343798;343799;343800;343801;343802;343803;343804;343805;343806;343807;343808;343809;343810;343811;343812;343813;343814;343815;343816 272659;272660;272661;272662;272663;272664;272665;272666;272667;272668;272669;272670;272671;272672;272673;272674 272661 16 QEAQLELPEQQVGQPK Unmodified 1820.9268 0.92684164 843 P07476 IVL Involucrin yes yes 0 0 0 By MS/MS 10 0 2 2 62.937 62.243 2;3 1.8324E-20 71865 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 147.26 133.29 16048000 0 0 0 16048000 0 0 0 0 0 0 0 0 0 0 0 41252 843 36874 343817;343818 272675;272676;272677 272676 3 QEASNLLQESNCSQYMEK Unmodified 2157.9307 0.93068275 2329 Q13617 CUL2 Cullin-2 yes yes 0 0 0 By MS/MS 2 0 1 1 65.163 59.246 2 8.7898E-96 75821 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 202.13 182.49 17720000 0 17720000 0 0 0 0 0 0 0 0 0 0 0 0 0 41253 2329 36875 343819 272678;272679 272679 2 QEATFCSQR Unmodified 1125.4873 0.48730662 4577 Q9NQW6 ANLN Actin-binding protein anillin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 17.475 17.663 2 0.0042902 17491 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 87.308 71.105 71635000 0 0 0 5177500 5906100 6073600 5987800 3280400 3044600 5787600 5850400 10882000 5474700 5640600 8530000 41254 4577 36876 343820;343821;343822;343823;343824;343825;343826;343827;343828;343829;343830;343831 272680;272681;272682;272683;272684;272685;272686;272687;272688 272686 9 QEATLVVGGDGR Unmodified 1200.6099 0.6098646 1380 P36871 PGM1 Phosphoglucomutase-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 37.095 37.657 2 3.3329E-08 40558 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 126.03 88.298 45982000 0 0 0 0 0 0 0 0 0 0 10134000 6655500 0 8859900 20333000 41255 1380 36877 343832;343833;343834;343835 272689;272690;272691;272692;272693 272690 5 QEAVVEEDYNENAK Unmodified 1636.7217 0.72165947 2003 P82970 HMGN5 High mobility group nucleosome-binding domain-containing protein 5 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 34.668 33.917 2 4.4765E-118 36767 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 254.53 248 47034000 5064800 0 0 0 0 0 0 0 0 3121600 12825000 0 2315500 5958900 17748000 41256 2003 36878 343836;343837;343838;343839;343840;343841 272694;272695;272696;272697 272694 4 QECEAEASSVK Unmodified 1236.5292 0.52923102 4814 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 15 1 2 2 1 2 2 1 1 1 2 11.408 11.567 2 0.0013675 10421 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 73.233 60.706 83214000 0 0 0 4143600 0 8979800 7839700 6005200 8310000 10994000 5756200 14842000 0 6619200 9723800 41257 4814 36879 343842;343843;343844;343845;343846;343847;343848;343849;343850;343851;343852;343853;343854;343855;343856 272698;272699;272700;272701 272700 4 QEDFMTTMDANEEK Unmodified 1687.6706 0.67055188 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS 2 0 1 1 62.459 56.566 2 5.373E-05 72618 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.752 65.546 6835500 0 6835500 0 0 0 0 0 0 0 0 0 0 0 0 0 41258 2047 36880 343857 272702 272702 1 QEDIMNR Oxidation (M) 920.40218 0.40218001 4023 Q99567 NUP88 Nuclear pore complex protein Nup88 yes yes 0 1 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.9993 7.1229 2 0.022046 5302 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 71.949 37.057 58217000 0 0 0 2388400 3289400 5543500 3878000 6096700 3064700 5803900 6580600 4407400 5976000 5950600 5237900 41259 4023 36881 343858;343859;343860;343861;343862;343863;343864;343865;343866;343867;343868;343869 272703;272704 272704 2 QEDSGLRDHSVR Unmodified 1397.6648 0.66475372 5268 Q9Y679 AUP1 Ancient ubiquitous protein 1 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.317 11.432 3 0.032061 10328 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 33.195 24.466 32916000 0 0 0 2037300 2476500 2662700 2406600 2732400 2015000 3561100 0 4390700 4095900 2635300 3902800 41260 5268 36882 343870;343871;343872;343873;343874;343875;343876;343877;343878;343879;343880 272705;272706 272706 2 QEEASGGPTAPK Unmodified 1170.5517 0.55168102 1629 P50552 VASP Vasodilator-stimulated phosphoprotein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.283 11.4 2 1.6117E-06 10420 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 114.89 107.67 195770000 0 0 0 23120000 10411000 18715000 15201000 10766000 11868000 18615000 0 23975000 19471000 15571000 28052000 41261 1629 36883 343881;343882;343883;343884;343885;343886;343887;343888;343889;343890;343891 272707;272708;272709;272710;272711;272712;272713;272714;272715;272716;272717 272707 11 QEEEMMAK Oxidation (M) 1010.4049 0.40488213 1356 P35579 MYH9 Myosin-9 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.1752 7.2989 2 0.0039811 5582 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 104.21 89.545 107370000 0 0 0 5852500 9648300 7646800 6718500 5989400 8202900 9832200 17319000 11932000 9689700 6500900 8039300 41262 1356 36884 343892;343893;343894;343895;343896;343897;343898;343899;343900;343901;343902;343903 272718;272719;272720;272721;272722;272723;272724;272725;272726;272727 272725 2088;2089 9 QEEEMMAK Unmodified 994.40997 0.4099675 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 15.141 15.336 2 0.0068946 15030 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 91.906 82.318 199610000 0 0 0 0 16075000 18547000 21012000 17195000 12072000 19347000 29078000 25315000 0 24514000 16454000 41263 1356 36884 343904;343905;343906;343907;343908;343909;343910;343911;343912;343913;343914 272728;272729;272730;272731;272732;272733;272734;272735;272736;272737 272730 10 QEEEMMAK 2 Oxidation (M) 1026.3998 0.39979675 1356 P35579 MYH9 Myosin-9 yes yes 0 2 0 By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 5.5238 5.6438 2 0.0093161 3558 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 56.547 51.067 40888000 0 0 0 5230900 4018200 4909000 0 0 2708100 6733400 3377700 5403100 3571800 1354900 3581400 41264 1356 36884 343915;343916;343917;343918;343919;343920;343921;343922;343923;343924 272738 272738 2088;2089 1 QEEEMMAKEEELVK 2 Oxidation (M) 1753.775 0.77501695 1356 P35579 MYH9 Myosin-9 yes yes 0 2 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 13 2 1 2 1 2 1 1 2 1 28.558 28.727 3 0.000159 31489 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 76.759 68.784 297560000 0 0 0 33587000 18459000 30205000 0 0 21948000 34380000 49501000 95100000 0 0 14380000 41265 1356 36885 343925;343926;343927;343928;343929;343930;343931;343932;343933;343934;343935;343936;343937 272739;272740;272741;272742;272743;272744;272745;272746 272746 2088;2089 4 QEEEMMAKEEELVK Unmodified 1721.7852 0.78518771 1356 P35579 MYH9 Myosin-9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 53.945 54.076 3 0.028609 61156 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 23.481 20.176 83156000 0 0 0 10947000 17077000 0 10705000 11942000 0 0 8672600 9787600 7044800 0 6980200 41266 1356 36885 343938;343939;343940;343941;343942;343943;343944;343945 272747;272748 272747 1 QEEENPAEETGEEK Unmodified 1617.6642 0.66420417 365 O43768 ENSA Alpha-endosulfine yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 18.332 17.55 2 2.3281E-16 17837 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 131.43 69.839 67572000 7841200 7991100 0 0 0 0 1451900 0 868590 0 8533400 11070000 0 9165400 20651000 41267 365 36886 343946;343947;343948;343949;343950;343951;343952;343953 272749;272750;272751;272752;272753;272754 272754 6 QEEEQDLDGEK Unmodified 1318.5525 0.55246888 2018 P84157 MXRA7 Matrix-remodeling-associated protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.484 15.653 2 1.9155E-07 14202 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 170.47 154.59 93135000 0 0 0 5124100 4759300 4160600 4526300 4672000 3438600 9005100 9992700 16909000 8955500 8561600 13030000 41268 2018 36887 343954;343955;343956;343957;343958;343959;343960;343961;343962;343963;343964;343965 272755;272756;272757;272758;272759;272760;272761;272762;272763;272764;272765;272766;272767 272763 13 QEEERQDGGQNESFK Unmodified 1779.766 0.7659839 3041 Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.378 12.529 3 8.8345E-29 11593 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 118.71 114.16 545030000 0 0 0 26877000 34474000 36183000 42928000 39730000 36327000 71362000 55620000 79860000 40651000 39221000 41799000 41269 3041 36888 343966;343967;343968;343969;343970;343971;343972;343973;343974;343975;343976;343977 272768;272769;272770;272771;272772;272773;272774;272775;272776;272777;272778 272778 7 QEEESLGQVTDQVEVNAQNSVPDEEAK Unmodified 2971.353 0.35304738 2117 Q05682 CALD1 Caldesmon yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 75.776 75.844 3 7.1243E-11 87553 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 32.434 26.833 49569000 0 0 0 0 6203100 0 0 0 0 18836000 15433000 0 0 0 9096500 41270 2117 36889 343978;343979;343980;343981 272779;272780;272781 272779 3 QEEETSGQDSSLK Unmodified 1436.6267 0.62669646 4030 Q99590 SCAF11 Protein SCAF11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 11.916 12.065 2 2.8591E-25 11240 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 160.18 144.52 64855000 0 0 0 4731600 4536000 6783800 4467800 3758800 3122800 5756800 4179600 7753400 6192500 6058500 7513400 41271 4030 36890 343982;343983;343984;343985;343986;343987;343988;343989;343990;343991;343992;343993 272782;272783;272784;272785;272786;272787;272788;272789;272790;272791;272792;272793 272790 5 QEEFDVANNGSSQANK Unmodified 1736.7602 0.76017024 1243 P29144 TPP2 Tripeptidyl-peptidase 2 yes yes 0 0 0 By MS/MS 10 0 1 1 32.092 32.808 2 1.6669E-23 34865 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 121.02 117.8 5495500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5495500 41272 1243 36891 343994 272794 272794 1 QEEIDNYKK Unmodified 1165.5615 0.56151742 3217 Q8IUD2 ERC1 ELKS/Rab6-interacting/CAST family member 1 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 16.241 12.758 3 0.031253 16581 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 43.083 33.078 31887000 0 31887000 0 0 0 0 0 0 0 0 0 0 0 0 0 41273 3217 36892 343995;343996 272795 272795 1 QEELQQLEQQRR Unmodified 1583.8016 0.80158155 2501 Q15149 PLEC Plectin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.83 39.009 3 0.00012681 43455 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 71.153 57.74 102330000 0 0 0 10114000 7847800 10535000 8865700 5345600 4420200 14114000 8239900 8391600 9381000 9059800 6011200 41274 2501 36893 343997;343998;343999;344000;344001;344002;344003;344004;344005;344006;344007;344008 272796;272797;272798;272799;272800;272801;272802;272803;272804;272805;272806;272807 272797 12 QEEMNSQQEEEEMETDAR Unmodified 2211.8532 0.85322029 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 16 3 1 2 2 2 2 2 1 1 42.73 42.879 2;3 7.8374E-24 48404 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 130.07 130.07 80667000 0 0 0 0 10720000 5940600 11527000 4286700 0 9903100 14204000 0 5261600 4958100 13866000 41275 2290 36894 344009;344010;344011;344012;344013;344014;344015;344016;344017;344018;344019;344020;344021;344022;344023;344024 272808;272809;272810;272811;272812;272813;272814;272815 272815 8 QEEMNSQQEEEEMETDAR Oxidation (M) 2227.8481 0.84813491 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 1 0 By MS/MS 10 0 1 1 33.916 33.968 3 0.00081446 37300 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 40.349 31.959 6705300 0 0 0 0 0 0 6705300 0 0 0 0 0 0 0 0 41276 2290 36894 344025 272816 272816 3733;3734 1 QEENDVVEK Unmodified 1088.4986 0.49858282 5253 Q9Y5X2 SNX8 Sorting nexin-8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 11.003 11.296 2 0.014892 9401 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.859 13.509 6909300 0 0 0 0 0 0 0 0 0 0 0 1688400 2007000 0 3213800 41277 5253 36895 344026;344027;344028 272817;272818 272817 2 QEEPPPGPQRPDQSAAAAGPGDPK Unmodified 2396.1357 0.13566522 4087 Q9BQ61 C19orf43 Uncharacterized protein C19orf43 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 34.686 34.813 3 1.6484E-09 37507 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 60.747 48.084 54582000 0 0 0 5050600 2526100 0 6080500 4521600 0 6255300 14783000 10411000 0 4952600 0 41278 4087 36896 344029;344030;344031;344032;344033;344034;344035;344036;344037 272819;272820;272821;272822;272823;272824;272825;272826;272827 272824 8 QEEQMETEQQNK Oxidation (M) 1536.6362 0.63621528 505 O75475 PSIP1 PC4 and SFRS1-interacting protein yes yes 0 1 0 By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 5.7759 5.8829 2 1.8785E-08 3569 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 132.01 129.03 31641000 0 0 0 2073900 2185300 6782700 2290400 1378500 4954600 0 3307800 0 0 2841300 5826200 41279 505 36897 344038;344039;344040;344041;344042;344043;344044;344045;344046;344047 272828;272829;272830;272831;272832 272830 655 5 QEEQMETEQQNK Unmodified 1520.6413 0.64130066 505 O75475 PSIP1 PC4 and SFRS1-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 10.105 10.242 2 3.29E-12 7108 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 180.67 178.83 51223000 0 0 0 3016900 2180300 6833700 2217200 1595100 4332500 4510000 5974800 6307700 5090400 3719700 5444300 41280 505 36897 344048;344049;344050;344051;344052;344053;344054;344055;344056;344057;344058;344059 272833;272834;272835;272836;272837;272838;272839;272840;272841;272842;272843 272837 11 QEESADARAPSGK Unmodified 1344.627 0.62697123 2228 Q13045 FLII Protein flightless-1 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 7.2467 6.8808 2;3 0.01123 5342 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 39.394 23.85 52635000 0 5630800 0 1856200 2409600 5092100 2162600 2574700 4260100 4428200 6837000 3864000 4278100 4396200 4845300 41281 2228 36898 344060;344061;344062;344063;344064;344065;344066;344067;344068;344069;344070;344071;344072;344073 272844;272845;272846;272847;272848;272849 272847 6 QEESVDPDYWEK Unmodified 1523.6416 0.64161824 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 55.457 55.727 2 0.0011306 63233 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 81.865 69.658 117510000 0 0 0 0 0 11709000 6709600 9286500 7876500 15399000 15904000 16236000 10643000 8821800 14922000 41282 2451 36899 344074;344075;344076;344077;344078;344079;344080;344081;344082;344083 272850;272851;272852;272853;272854 272850 4 QEETAVLEEDSADWEK Unmodified 1877.8167 0.81668207 3732 Q96A49 SYAP1 Synapse-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 67.809 68.013 2 2.2325E-21 77345 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 142.91 127.02 36279000 0 0 0 0 0 7844200 0 0 0 7253400 7636900 0 4252800 0 9291800 41283 3732 36900 344084;344085;344086;344087;344088;344089 272855;272856;272857;272858;272859;272860 272857 6 QEEYEAFLLK Unmodified 1268.6289 0.62886871 4888 Q9UGR2 ZC3H7B Zinc finger CCCH domain-containing protein 7B yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 77.831 77.632 2 0.03995 89513 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 40.067 15.144 18118000 0 0 0 5985100 4707300 0 0 7425600 0 0 0 0 0 0 0 41284 4888 36901 344090;344091;344092 272861 272861 1 QEFMDGMTELGCDSIEK Oxidation (M) 2004.8115 0.81147881 3854 Q96GG9 DCUN1D1 DCN1-like protein 1 yes yes 0 1 0 By MS/MS 2 0 2 2 73.016 67.575 2 7.4399E-07 86907 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.084 86.606 58112000 0 58112000 0 0 0 0 0 0 0 0 0 0 0 0 0 41285 3854 36902 344093;344094 272862;272863 272863 5363;5364 2 QEFMDGMTELGCDSIEK Unmodified 1988.8166 0.81656419 3854 Q96GG9 DCUN1D1 DCN1-like protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 82.215 78.213 2 4.2817E-73 97033 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 179.67 175.16 152360000 0 152360000 0 0 0 0 0 0 0 0 0 0 0 0 0 41286 3854 36902 344095;344096 272864;272865 272864 2 QEFMDGMTELGCDSIEK 2 Oxidation (M) 2020.8064 0.80639343 3854 Q96GG9 DCUN1D1 DCN1-like protein 1 yes yes 0 2 0 By MS/MS 2 0 1 1 60.279 54.421 2 3.5097E-09 70035 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.013 81.288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41287 3854 36902 344097 272866 272866 5363;5364 1 QEFPWEEEYR Unmodified 1411.6044 0.60444487 4627 Q9NSG2 C1orf112 Uncharacterized protein C1orf112 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 67.731 67.974 2 0.042896 77916 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 39.148 25.145 44425000 0 0 0 0 0 0 0 0 0 0 22789000 0 0 21636000 0 41288 4627 36903 344098;344099 272867 272867 1 QEGDTFYIK Unmodified 1099.5186 0.51858998 1247 P29373 CRABP2 Cellular retinoic acid-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 48.548 48.329 2 0.0033124 55281 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 93.429 75.104 22253000 0 0 0 17822000 0 0 0 4430700 0 0 0 0 0 0 0 41289 1247 36904 344100;344101 272868 272868 1 QEGGDNDLIER Unmodified 1244.5633 0.56330834 1285 P30566 ADSL Adenylosuccinate lyase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 29.702 29.984 2 0.0002336 31326 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 106.18 89.975 59599000 0 0 0 2221000 0 0 2349500 0 2265500 2615300 10624000 9388900 3027600 8647500 18460000 41290 1285 36905 344102;344103;344104;344105;344106;344107;344108;344109;344110 272869;272870;272871 272869 2 QEGLDLTGTAATATSFAAPPK Unmodified 2046.0269 0.026949617 3227 Q8IVH2 FOXP4 Forkhead box protein P4 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 80.298 80.405 2 2.9331E-07 93155 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 89.624 75.961 43590000 0 0 0 0 4575900 0 0 5872500 2459000 8529900 7331600 5702600 3197400 0 5920900 41291 3227 36906 344111;344112;344113;344114;344115;344116;344117;344118 272872;272873;272874;272875;272876 272875 5 QEGLESVLK Unmodified 1001.5393 0.53932542 1010 P14923 JUP Junction plakoglobin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 55.15 55.279 2 0.0032668 62893 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 93.143 40.741 715410000 0 0 0 189440000 40862000 39502000 30587000 177110000 26269000 0 40569000 50102000 76966000 21192000 22812000 41292 1010 36907 344119;344120;344121;344122;344123;344124;344125;344126;344127;344128;344129 272877;272878;272879;272880;272881;272882;272883;272884;272885;272886;272887 272882 10 QEGLTQTYAPSGR Unmodified 1406.679 0.6790068 2722 Q5D1E8 ZC3H12A Ribonuclease ZC3H12A yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 37.592 37.713 2 3.1972E-05 40656 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.548 66.907 21318000 0 0 0 0 2326800 2945500 0 3949800 1960800 3910700 0 0 0 0 6224100 41293 2722 36908 344130;344131;344132;344133;344134;344135 272888;272889;272890;272891;272892 272890 4 QEGPATQVSK Unmodified 1043.5247 0.52473799 2289 Q13428 TCOF1 Treacle protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.693 11.821 2 0.0061569 10871 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 66.056 31.803 47531000 0 0 0 2125600 3707900 5217500 4044700 4247800 3859100 4514700 4156300 0 5441100 4660800 5555200 41294 2289 36909 344136;344137;344138;344139;344140;344141;344142;344143;344144;344145;344146 272893;272894;272895;272896;272897 272896 4 QEGTPEGLYL Unmodified 1105.5292 0.52915466 1875 P62191 PSMC1 26S protease regulatory subunit 4 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 76.293 76.241 2 0.018136 87941 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.561 39.698 26907000 0 0 0 2353400 3043600 3903000 0 0 0 4611000 5510900 7485400 0 0 0 41295 1875 36910 344147;344148;344149;344150;344151;344152 272898 272898 1 QEGVLNSK Unmodified 873.4556 0.45559579 1704 P52888 THOP1 Thimet oligopeptidase yes yes 0 0 0 By MS/MS 2 0 1 1 14.048 10.734 2 0.024452 14543 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.81 62.836 197090000 0 197090000 0 0 0 0 0 0 0 0 0 0 0 0 0 41296 1704 36911 344153 272899 272899 0 QEHADGLLK Unmodified 1009.5193 0.51925868 3041 Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 20.546 20.712 2 0.00042833 20087 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 146.58 55.598 84142000 0 0 0 0 10936000 0 0 0 13909000 32350000 0 0 0 0 26947000 41297 3041 36912 344154;344155;344156;344157;344158;344159;344160;344161;344162;344163;344164 272900;272901;272902;272903;272904;272905;272906;272907;272908;272909;272910 272903 10 QEHCSQLESHLK Unmodified 1494.6885 0.68852563 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 26.502 22.256 2;3 0.00026153 31761 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.943 83.792 109430000 78059000 10872000 20503000 0 0 0 0 0 0 0 0 0 0 0 0 41298 2495 36913 344165;344166;344167;344168 272911;272912;272913;272914;272915;272916;272917 272912 6 QEHLAESPVALGPER Unmodified 1631.8267 0.82673367 3017 Q6ZUT9 DENND5B DENN domain-containing protein 5B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 52.086 52.382 3 7.2763E-05 59265 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 50.831 44.394 95159000 0 0 0 0 0 11494000 11629000 10539000 0 10175000 0 24393000 0 9633400 17295000 41299 3017 36914 344169;344170;344171;344172;344173;344174;344175;344176 272918;272919;272920;272921;272922;272923;272924;272925 272919 8 QEIAEAQQLITICR Unmodified 1671.8614 0.86140461 1721 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching 10 0 10 1 1 1 1 1 1 2 1 1 77.007 77.081 2 1.2052E-07 89111 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 92.112 80.381 23267000 0 0 0 1356500 0 2703700 1778200 0 2006300 2325500 2092100 0 3837100 2053700 5113800 41300 1721 36915 344177;344178;344179;344180;344181;344182;344183;344184;344185;344186 272926;272927 272926 2 QEIAEINR Unmodified 971.50361 0.50360861 66;58;779;80 P04259;CON__P50446;CON__P02538;P02538;CON__P04259 KRT6B;KRT6A Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 6A no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 2 1 1 1 1 1 1 28.568 28.708 2 1.0307E-18 30831 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 175.86 102.22 + 1778800000 0 0 0 478290000 0 0 180150000 168650000 0 143910000 0 118500000 613170000 76088000 0 41301 779;80;58;66 36916 344187;344188;344189;344190;344191;344192;344193;344194 272928;272929;272930;272931;272932;272933;272934;272935 272928 7 QEIECQNQEYSLLLSIK Unmodified 2094.0303 0.030320436 1354 P35527;CON__P35527 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 0 By MS/MS By MS/MS By matching By matching 10 0 4 1 1 1 1 86.457 86.482 2 0.00032502 100334 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 80.469 66.505 + 16596000 0 0 0 3059600 0 0 0 0 0 7095400 3194000 0 0 0 3247400 41302 1354 36917 344195;344196;344197;344198 272936;272937 272936 2 QEIFQEQLAAVPEFR Unmodified 1803.9155 0.91554867 5267 Q9Y678 COPG1 Coatomer subunit gamma-1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 1 1 1 1 1 2 1 2 1 2 2 86.228 86.311 2;3 6.8615E-31 100061 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 185.25 166.5 71596000 0 0 0 1086400 1858300 4397900 1552500 2239300 4235900 11683000 5910100 10593000 2463200 6034500 19542000 41303 5267 36918 344199;344200;344201;344202;344203;344204;344205;344206;344207;344208;344209;344210;344211;344212;344213;344214 272938;272939;272940;272941;272942;272943;272944;272945;272946;272947;272948;272949;272950;272951 272941 13 QEILAALEK Unmodified 1013.5757 0.57571092 844 P07602 PSAP Prosaposin;Saposin-A;Saposin-B-Val;Saposin-B;Saposin-C;Saposin-D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 67.957 66.66 2 0.0029852 77208 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 126.07 56.243 519480000 6000800 147520000 3669700 62139000 20889000 19170000 25896000 24098000 15610000 30989000 37765000 43882000 25575000 24173000 32109000 41304 844 36919 344215;344216;344217;344218;344219;344220;344221;344222;344223;344224;344225;344226;344227;344228;344229;344230 272952;272953;272954;272955;272956;272957;272958;272959;272960;272961;272962;272963;272964;272965;272966 272965 13 QEILEQVLNR Unmodified 1240.6776 0.67755023 4669 Q9NVI1 FANCI Fanconi anemia group I protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 2 1 1 75.745 75.563 2 0.0070223 87087 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 97.431 67.621 6211900 0 0 0 0 3019800 3192100 0 0 0 0 0 0 0 0 0 41305 4669 36920 344231;344232;344233;344234;344235 272967;272968;272969;272970 272968 3 QEILPEER Unmodified 1012.5189 0.51892433 517 O75534 CSDE1 Cold shock domain-containing protein E1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 37.254 37.658 2 0.0063717 41478 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 101.43 83.052 84912000 0 0 0 0 0 6233700 0 0 0 10023000 19546000 14527000 0 10977000 23606000 41306 517 36921 344236;344237;344238;344239;344240;344241 272971;272972;272973;272974;272975;272976 272974 5 QEILVEPEPLFGAPK Unmodified 1665.8978 0.89777334 598 O94888 UBXN7 UBX domain-containing protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.39 3.7 5 1 12 1 4 1 1 1 1 1 1 1 1 1 1 1 1 1 87.127 85.985 2;3 7.615E-84 99056 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 189.13 181.4 743310000 0 531960000 3649900 6897600 9319300 17355000 13239000 11466000 13765000 22064000 21684000 23862000 14786000 15932000 37326000 41307 598 36922 344242;344243;344244;344245;344246;344247;344248;344249;344250;344251;344252;344253;344254;344255;344256;344257;344258;344259 272977;272978;272979;272980;272981;272982;272983;272984;272985;272986;272987;272988;272989;272990;272991;272992;272993;272994;272995 272989 18 QEINTLLEAK Unmodified 1157.6292 0.62920306 2296 Q13464 ROCK1 Rho-associated protein kinase 1 yes yes 0 0 0 By MS/MS 2 0 1 1 65.893 59.975 2 3.292E-05 76697 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.16 46.39 25859000 0 25859000 0 0 0 0 0 0 0 0 0 0 0 0 0 41308 2296 36923 344260 272996 272996 1 QEITEGELK Unmodified 1045.5292 0.52915466 3657 Q92766 RREB1 Ras-responsive element-binding protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 31.919 31.507 2 0.033195 34661 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 67.494 18.052 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41309 3657 36924 344261 272997 272997 1 QEITFTDVSEQLMR Oxidation (M) 1711.8087 0.80870034 5074 Q9UQR1 ZNF148 Zinc finger protein 148 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 79.349 79.458 2 0.00025835 91850 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 72.531 34.931 35394000 0 0 0 0 0 11524000 4762700 0 0 9348500 0 9758700 0 0 0 41310 5074 36925 344262;344263;344264;344265 272998;272999;273000;273001 272999 6455 2 QEIVSLFNAFGR Unmodified 1379.7197 0.7197494 3866 Q96HE7 ERO1L ERO1-like protein alpha yes yes 0 0 0 By MS/MS 10 0 1 1 90.594 90.733 2 0.039696 105129 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 34.953 15.697 1485600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1485600 41311 3866 36926 344266 273002 273002 1 QELAETLANLER Unmodified 1385.7151 0.71505795 4485 Q9HAF1 MEAF6 Chromatin modification-related protein MEAF6 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 77.855 77.941 2 0.00015103 89618 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.014 59.341 16516000 0 0 0 0 1949700 0 0 0 0 0 3049400 5963500 0 0 5553700 41312 4485 36927 344267;344268;344269;344270;344271 273003;273004;273005 273004 3 QELATLK Unmodified 801.45962 0.45961853 430 O60763 USO1 General vesicular transport factor p115 yes yes 0 0 0 By MS/MS 2 0 1 1 31.011 26.559 1 0.045232 34851 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 164.53 57.104 13845000 0 13845000 0 0 0 0 0 0 0 0 0 0 0 0 0 41313 430 36928 344272 273006 273006 1 QELAVFCSPEPPAK Unmodified 1571.7654 0.76537896 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 69.85 70.316 2 1.3461E-12 80209 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 106.26 63.514 4896200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4896200 41314 5187 36929 344273;344274;344275;344276;344277 273007;273008;273009;273010;273011 273009 5 QELAYNQQLSEK Unmodified 1449.71 0.70997257 211 O14772 FPGT Fucose-1-phosphate guanylyltransferase yes yes 0 0 0 By MS/MS 2 0 1 1 45.47 40.149 2 1.2253E-08 52206 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 146.11 103.24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41315 211 36930 344278 273012 273012 1 QELDDILK Unmodified 972.51278 0.51277632 2451;2201 Q12873;Q14839 CHD3;CHD4 Chromodomain-helicase-DNA-binding protein 3;Chromodomain-helicase-DNA-binding protein 4 no no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.28 62.377 2 0.0063713 70229 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 127.02 44.35 385750000 0 0 0 22193000 18863000 31818000 29319000 25921000 20836000 44526000 36695000 42782000 41859000 24804000 46132000 41316 2201;2451 36931 344279;344280;344281;344282;344283;344284;344285;344286;344287;344288;344289;344290 273013;273014;273015;273016;273017;273018;273019;273020;273021;273022;273023 273019 11 QELEAELAK Unmodified 1029.5342 0.53424004 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.964 60.071 2 0.027043 68230 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 49.57 6.7349 454030000 0 0 0 49236000 12896000 25924000 13097000 86654000 14480000 50836000 39921000 100630000 36332000 12031000 11998000 41317 2501 36932 344291;344292;344293;344294;344295;344296;344297;344298;344299;344300;344301;344302 273024 273024 1 QELEEEQRR Unmodified 1215.5844 0.58437813 2061 Q01664 TFAP4 Transcription factor AP-4 yes yes 0 0 1 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 2 1 1 1 1 1 8.7721 8.903 3 0.0016355 6125 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 84.213 37.751 96184000 0 0 0 5787900 6598400 5375300 8971500 0 4840000 6957900 19519000 10226000 8749500 7155300 12003000 41318 2061 36933 344303;344304;344305;344306;344307;344308;344309;344310;344311;344312;344313;344314 273025;273026;273027;273028 273028 3 QELEEICHDLEAR Unmodified 1640.7464 0.74643444 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 66.072 66.051 3 0.00055208 75734 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 58.21 45.584 28826000 0 0 0 1888900 1227400 7754000 2005800 0 5405500 2686500 0 4297400 0 3561000 0 41319 1356 36934 344315;344316;344317;344318;344319;344320;344321;344322 273029;273030 273029 2 QELENQR Unmodified 915.44101 0.44100836 4890 Q9UH65 SWAP70 Switch-associated protein 70 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 6.9888 6.9955 2 0.023433 5060 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 85.357 36.299 4800400 0 0 0 0 0 2708400 2092100 0 0 0 0 0 0 0 0 41320 4890 36935 344323;344324 273031 273031 1 QELENQRVLK Unmodified 1255.6884 0.68844927 4890 Q9UH65 SWAP70 Switch-associated protein 70 yes yes 0 0 1 By MS/MS By matching By MS/MS 2 0 4 1 1 2 30.459 26.308 2;3 6.3345E-10 33300 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 162.49 54.599 141800000 10024000 9213500 122560000 0 0 0 0 0 0 0 0 0 0 0 0 41321 4890 36936 344325;344326;344327;344328 273032;273033 273033 2 QELFAFNK Unmodified 995.50763 0.50763136 2517 Q15334 LLGL1 Lethal(2) giant larvae protein homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 66.383 65.98 2 0.013456 84977 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.602 72.603 61004000 0 14164000 0 2726200 2653800 4086500 3217900 2813300 3046200 6850600 0 4835100 4157300 5112300 7340700 41322 2517 36937 344329;344330;344331;344332;344333;344334;344335;344336;344337;344338;344339;344340 273034;273035 273034 2 QELGEARATVGK Unmodified 1257.6677 0.66771383 264 O15212 PFDN6 Prefoldin subunit 6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 2 3 2 26.629 22.424 2;3 2.1595E-06 31658 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 118.04 66.091 513560000 76672000 166490000 270390000 0 0 0 0 0 0 0 0 0 0 0 0 41323 264 36938 344341;344342;344343;344344;344345;344346;344347 273036;273037;273038;273039 273038 4 QELGSPEER Unmodified 1043.4884 0.48835248 3693 Q92974 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 17.166 17.35 2 0.0019594 16627 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 140.35 87.717 118400000 0 0 0 6406000 7039900 8509100 7358000 8620600 5546900 12084000 13303000 15757000 11147000 10248000 12384000 41324 3693 36939 344348;344349;344350;344351;344352;344353;344354;344355;344356;344357;344358;344359 273040;273041;273042;273043;273044;273045;273046;273047;273048;273049;273050;273051 273046 11 QELIDFK Unmodified 891.47018 0.47018322 5032 Q9UNH7 SNX6 Sorting nexin-6;Sorting nexin-6, N-terminally processed yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 66.246 59.14 2 0.023708 76053 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.21 16.18 202440000 14361000 188080000 0 0 0 0 0 0 0 0 0 0 0 0 0 41325 5032 36940 344360;344361 273052 273052 1 QELILSNSEDK Unmodified 1274.6354 0.63541065 1721 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.331 42.508 2 1.04E-07 47080 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 148.56 110.26 517910000 0 0 0 29504000 29952000 40577000 36063000 37267000 25492000 53095000 53699000 63304000 50608000 40873000 57471000 41326 1721 36941 344362;344363;344364;344365;344366;344367;344368;344369;344370;344371;344372;344373 273053;273054;273055;273056;273057;273058;273059;273060;273061;273062;273063;273064 273058 11 QELIQAEIQNGVK Unmodified 1468.7886 0.78855725 2205 Q12904 AIMP1 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1;Endothelial monocyte-activating polypeptide 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 66.078 64.479 2;3 5.1185E-159 82073 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 248.09 178.28 310860000 6323600 161460000 2329700 7305500 7416500 11496000 7261700 8485300 6642300 12073000 17968000 21119000 8911600 11805000 20257000 41327 2205 36942 344374;344375;344376;344377;344378;344379;344380;344381;344382;344383;344384;344385;344386;344387;344388;344389;344390 273065;273066;273067;273068;273069;273070;273071;273072;273073;273074;273075;273076;273077;273078;273079;273080;273081;273082;273083;273084 273070 20 QELLEALTK Unmodified 1043.5863 0.58627561 973 P12956 XRCC6 X-ray repair cross-complementing protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 70.951 70.948 2 0.0034032 80595 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 105.36 41.151 67055000 0 0 0 4241300 4713600 11478000 0 0 6234700 0 11555000 0 0 9171800 19661000 41328 973 36943 344391;344392;344393;344394;344395;344396;344397 273085;273086;273087;273088;273089 273086 5 QELLEEVK Unmodified 986.52843 0.52842638 1629 P50552 VASP Vasodilator-stimulated phosphoprotein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.8 3.92 2 3 1 1 1 1 1 49.078 47.396 2 0.0096391 53433 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 82.241 13.454 260880000 0 208120000 1430700 0 0 0 0 0 0 0 0 0 12342000 14120000 24867000 41329 1629 36944 344398;344399;344400;344401;344402 273090;273091;273092;273093 273093 3 QELNALTEALEK Unmodified 1357.7089 0.70890994 5388 yes yes 0 0 0 By MS/MS 3 0 2 2 65.914 61.207 2 0.0013723 74962 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 100.25 39.768 + 4656000 0 4656000 0 0 0 0 0 0 0 0 0 0 0 0 0 41330 5388 36945 344403;344404 273094;273095 273094 1 QELNEPPK Unmodified 953.48181 0.48181054 119 O00151 PDLIM1 PDZ and LIM domain protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 16.264 16.623 2 0.011947 15719 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.761 47.879 39454000 0 0 0 0 0 0 3217000 0 0 0 7794700 8779900 0 7981600 11681000 41331 119 36946 344405;344406;344407;344408;344409 273096 273096 1 QELQEEEEQTKPPR Unmodified 1739.8326 0.83260691 1081 P18858 LIG1 DNA ligase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 26.285 26.625 3 8.1676E-07 28134 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 98.582 87.948 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41332 1081 36947 344410;344411;344412 273097;273098;273099 273099 3 QELQEQLDLQHK Unmodified 1507.7631 0.76307078 5278 Q9Y6D9 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 1 2 1 1 2 1 1 45.794 45.963 2;3 1.6601E-14 50603 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 114.9 110.78 423370000 0 0 0 22306000 19811000 33693000 28598000 26961000 23643000 36538000 44763000 38155000 46031000 35172000 67696000 41333 5278 36948 344413;344414;344415;344416;344417;344418;344419;344420;344421;344422;344423;344424;344425;344426 273100;273101;273102;273103;273104;273105;273106;273107;273108;273109;273110;273111;273112;273113;273114 273108 14 QELQETQERLEAATQQNQQLR Unmodified 2540.2579 0.25790562 2156 Q08379 GOLGA2 Golgin subfamily A member 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 61.353 61.699 3 2.1776E-07 70389 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 65.47 58.024 32328000 0 0 0 0 0 0 0 0 2915400 7331500 4902300 6870500 0 0 10308000 41334 2156 36949 344427;344428;344429;344430;344431 273115;273116;273117;273118;273119 273118 5 QELQPGTAYK Unmodified 1133.5717 0.57168818 1663 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29.257 28.685 2 0.00054799 30963 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 128.12 88.475 160970000 271530 21184000 0 7847800 7419100 13018000 9764500 0 10419000 11580000 15001000 19652000 13372000 12016000 19429000 41335 1663 36950 344432;344433;344434;344435;344436;344437;344438;344439;344440;344441;344442;344443;344444;344445 273120;273121;273122;273123;273124;273125;273126;273127;273128;273129;273130;273131;273132;273133;273134;273135 273126 16 QELRAASVVQPQPLVVVK Unmodified 1960.1469 0.14694559 441 O60885 BRD4 Bromodomain-containing protein 4 yes yes 0 0 1 By MS/MS 2 0 1 1 80.658 72.528 3 0.043844 95164 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 26.075 24.383 11661000 11661000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41336 441 36951 344446 273136 273136 1 QELSFAAR Unmodified 920.47158 0.4715802 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 41.852 42.112 2 0.0046084 46783 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 110.03 65.631 245700000 0 0 0 0 12014000 34530000 23987000 0 0 30176000 26923000 33074000 15810000 24737000 44453000 41337 1565 36952 344447;344448;344449;344450;344451;344452;344453;344454;344455 273137;273138;273139;273140;273141 273138 4 QELSHALYQHDAACR Unmodified 1797.8217 0.82166506 5017 Q9UMS4 PRPF19 Pre-mRNA-processing factor 19 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 32.935 33.209 3 9.1513E-05 36198 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 76.358 65.252 71096000 0 0 0 5108100 0 5599900 4007900 0 0 0 11834000 12615000 8978900 7869800 15082000 41338 5017 36953 344456;344457;344458;344459;344460;344461;344462;344463 273142;273143;273144;273145;273146;273147 273143 6 QELTSQAERAEELGQELK Unmodified 2058.0229 0.022926872 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 69.117 69.26 3 0.00022512 78743 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 65.225 38.417 82000000 0 0 0 0 3490000 9207300 4343400 5971100 6893700 8401300 7799400 11007000 5714900 6278600 12893000 41339 2459 36954 344464;344465;344466;344467;344468;344469;344470;344471;344472;344473;344474 273148;273149;273150;273151;273152;273153;273154;273155;273156 273152 9 QELTVFQSK Unmodified 1078.5659 0.56587452 5201 Q9Y4G6 TLN2 Talin-2 yes yes 0 0 0 By MS/MS 2 0 1 1 56.347 50.529 2 0.0062473 65095 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.36 61.55 180810000 0 180810000 0 0 0 0 0 0 0 0 0 0 0 0 0 41340 5201 36955 344475 273157 273157 1 QELVAELDQDEK Unmodified 1415.678 0.67800374 318 O43318 MAP3K7 Mitogen-activated protein kinase kinase kinase 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 56.507 56.653 2 0.00013588 63535 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.363 57.938 7540000 0 0 0 0 0 0 4278900 0 0 0 0 0 0 3261100 0 41341 318 36956 344476;344477;344478;344479;344480;344481 273158;273159;273160;273161;273162;273163 273160 6 QELVLNQLIK Unmodified 1196.7129 0.71287311 2855 Q68CZ6 HAUS3 HAUS augmin-like complex subunit 3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 80.702 80.708 2 0.012177 93287 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 52.937 15.125 34362000 0 0 0 2040900 3629300 4149200 0 3347800 0 6565600 5728500 0 0 0 8901000 41342 2855 36957 344482;344483;344484;344485;344486;344487;344488 273164;273165;273166;273167 273165 4 QELVTQNELLK Unmodified 1313.7191 0.7190807 2479 Q15025 TNIP1 TNFAIP3-interacting protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 67.555 61.639 2 0.010847 78677 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.933 37.759 20809000 0 20809000 0 0 0 0 0 0 0 0 0 0 0 0 0 41343 2479 36958 344489 273168 273168 1 QEMNRLFGATNPK Oxidation (M) 1520.7406 0.7405612 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 34.376 34.691 3 1.9023E-05 37452 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 88.075 66 224220000 0 0 0 0 0 0 17284000 14157000 0 44632000 67708000 80438000 0 0 0 41344 4226 36959 344490;344491;344492;344493;344494 273169;273170;273171 273171 5703 3 QEMNRLFGATNPK Unmodified 1504.7456 0.74564657 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 2 2 1 2 2 1 48.262 47.683 2;3 2.1283E-06 53305 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 113.93 74.622 565550000 93788000 0 0 0 0 0 20302000 31250000 20494000 86352000 161570000 151800000 0 0 0 41345 4226 36959 344495;344496;344497;344498;344499;344500;344501;344502;344503;344504;344505 273172;273173;273174;273175;273176;273177;273178;273179;273180;273181 273173 10 QEMNTLQQK Oxidation (M) 1134.5339 0.53392246 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.6595 7.7867 2 0.0020646 6000 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 91.041 63.516 48324000 0 0 0 1474000 2159400 3735700 3261100 2202000 2993000 5043300 8674500 5647700 4549700 3921200 4662200 41346 2431 36960 344506;344507;344508;344509;344510;344511;344512;344513;344514;344515;344516;344517 273182;273183;273184;273185;273186;273187;273188;273189 273184 3999 8 QEMNTLQQK Unmodified 1118.539 0.53900784 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 17.215 17.399 2 0.009185 17781 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 67.464 44.751 74100000 0 0 0 4097500 3229000 6035700 3189000 4032800 3523500 5720600 8079800 10899000 6675800 6402300 12215000 41347 2431 36960 344518;344519;344520;344521;344522;344523;344524;344525;344526;344527;344528;344529 273190;273191;273192;273193;273194;273195;273196 273190 6 QEMQEVQSSR Oxidation (M) 1236.5405 0.54046441 1141 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 6.6057 6.7042 2 2.1638E-32 4592 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 182.76 153.39 243060000 0 0 0 13462000 13142000 13969000 17171000 14752000 14266000 26210000 0 42206000 0 29952000 57933000 41348 1141 36961 344530;344531;344532;344533;344534;344535;344536;344537;344538;344539;344540 273197;273198;273199;273200;273201;273202;273203 273198 1639 7 QEMQEVQSSR Unmodified 1220.5455 0.54554978 1141 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.578 14.741 2 6.4892E-55 13485 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 196.88 174.73 685640000 0 0 0 27687000 23776000 24096000 25469000 28540000 18317000 43201000 121540000 90650000 37849000 63087000 181420000 41349 1141 36961 344541;344542;344543;344544;344545;344546;344547;344548;344549;344550;344551;344552 273204;273205;273206;273207;273208;273209;273210;273211;273212;273213;273214;273215;273216;273217 273207 14 QENEARSEDPPTTPIR Unmodified 1838.8759 0.8758687 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 0 1 By matching By MS/MS By matching By matching By MS/MS 10 0 5 1 1 1 1 1 31.318 31.567 3 0.010832 33329 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 27.85 20.739 16035000 0 0 0 0 1724300 0 0 0 0 2436600 3415100 0 3767700 0 4691200 41350 2203 36962 344553;344554;344555;344556;344557 273218 273218 1 QENEDSSDATTPVPR Unmodified 1644.7227 0.72272211 2935 Q6P4R8 NFRKB Nuclear factor related to kappa-B-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.336 26.536 2 0.00089044 27266 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.522 70.282 32852000 0 0 0 1646300 2576300 3774500 2395200 2880000 1940800 2549700 2588800 3656100 3554100 2443400 2846300 41351 2935 36963 344558;344559;344560;344561;344562;344563;344564;344565;344566;344567;344568;344569 273219;273220;273221;273222;273223;273224;273225;273226;273227 273222 9 QENESGYER Unmodified 1110.4578 0.45778063 4162 Q9BUJ2 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 7.5174 7.4923 2 0.0094522 5662 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.692 31.254 3105100 0 0 0 0 0 3105100 0 0 0 0 0 0 0 0 0 41352 4162 36964 344570 273228 273228 1 QENGASVILR Unmodified 1085.5829 0.58292157 1255 P29692 EEF1D Elongation factor 1-delta yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.517 41.694 2 0.0067823 46086 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 118.33 61.053 391910000 0 0 0 15359000 17709000 31639000 21561000 23403000 12717000 33045000 45932000 47164000 27088000 32125000 84169000 41353 1255 36965 344571;344572;344573;344574;344575;344576;344577;344578;344579;344580;344581;344582 273229;273230;273231;273232;273233;273234;273235;273236;273237 273232 0 QENGASVILRDIAR Unmodified 1540.8322 0.8321534 1255 P29692 EEF1D Elongation factor 1-delta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 73.535 73.727 3 0.0016192 85021 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 50.843 32.431 45650000 0 0 0 0 0 4044100 0 0 0 0 8389300 8429900 3971700 0 20815000 41354 1255 36966 344583;344584;344585;344586;344587 273238;273239;273240 273239 3 QENSGPPENYDFPVVIVK Unmodified 2030.9949 0.99492121 261 O15164 TRIM24 Transcription intermediary factor 1-alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 84.361 84.369 3 0.01735 97693 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 28.166 24.839 55407000 0 0 0 5075700 7150600 10193000 8051800 9448800 9061500 0 0 0 6425500 0 0 41355 261 36967 344588;344589;344590;344591;344592;344593;344594 273241;273242;273243 273241 3 QEPENDQGVVSQAGK Unmodified 1584.738 0.73797824 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.436 24.645 2 3.706E-10 24910 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 106.49 97.304 112190000 0 0 0 11185000 6866300 8382200 7305100 7225900 11952000 0 9006900 13765000 10597000 10950000 14953000 41356 4139 36968 344595;344596;344597;344598;344599;344600;344601;344602;344603;344604;344605;344606 273244;273245;273246;273247;273248;273249;273250;273251;273252;273253;273254;273255;273256 273248 12 QEPERNECFLQHK Unmodified 1713.7893 0.7893023 64 CON__P02768-1;P02768 ALB Serum albumin yes no 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 26.847 27.116 3 0.00072537 28974 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 65.295 56.498 + 149520000 0 0 0 114180000 4435100 0 0 0 0 0 4730000 10549000 5337200 4998200 5284200 41357 64 36969 344607;344608;344609;344610;344611;344612;344613 273257;273258 273257 2 QEPERNECFLSHK Unmodified 1672.7628 0.7627532 65 CON__P02769 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 26.969 26.787 3 0.0027684 29048 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 67.952 40.612 + 297270000 0 0 6768100 38378000 59383000 22239000 19288000 25890000 19504000 54650000 0 0 16808000 14121000 20239000 41358 65 36970 344614;344615;344616;344617;344618;344619;344620;344621;344622;344623;344624 273259;273260;273261;273262;273263;273264;273265;273266;273267;273268 273268 5 QEPETVPTPALLNVR Unmodified 1662.8941 0.89408495 17 A3KN83 SBNO1 Protein strawberry notch homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.251 80.31 2 0.015517 92916 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 51.979 45.738 95296000 0 0 0 4040800 5013000 8289600 7440600 5338000 3810600 9524500 11873000 10453000 6326600 8421200 14765000 41359 17 36971 344625;344626;344627;344628;344629;344630;344631;344632;344633;344634;344635;344636 273269 273269 1 QEPEVNGGSGDAVPSGNEVSENMEEEAENQAESR Unmodified 3574.4874 0.48738538 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 72.12 72.251 3 2.1367E-50 83314 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 83.633 78.678 66880000 0 0 0 0 3543400 4713000 2723500 6062300 3905400 0 7391100 11755000 0 6423200 20363000 41360 1564 36972 344637;344638;344639;344640;344641;344642;344643;344644;344645 273270;273271;273272;273273;273274;273275 273275 6 QEPGEAPHVPATGAASQSPLPQYVTVK Unmodified 2758.3926 0.39260819 5000 Q9ULM3 YEATS2 YEATS domain-containing protein 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 73.966 74.04 3 0.00061103 85418 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 27.309 20.116 36435000 0 0 0 0 4770700 7940500 0 0 0 8906900 0 7678800 0 2805000 4332700 41361 5000 36973 344646;344647;344648;344649;344650;344651 273276;273277;273278 273277 3 QEPGGSHGSETEDTGR Unmodified 1642.6819 0.68191992 4968 Q9UKJ3 GPATCH8 G patch domain-containing protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.5488 6.673 3 0.0013234 4750 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 49.049 42.642 41013000 0 0 0 1464100 2897400 2452700 2796600 3253100 3101100 3985200 4643700 3889800 4555100 3881000 4093400 41362 4968 36974 344652;344653;344654;344655;344656;344657;344658;344659;344660;344661;344662;344663 273279;273280;273281;273282;273283;273284;273285;273286;273287;273288;273289;273290 273288 11 QEPGTEDEICSFSGGVK Unmodified 1838.7993 0.79925787 5052 Q9UPN9 TRIM33 E3 ubiquitin-protein ligase TRIM33 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 61.492 61.13 2 4.9379E-53 76029 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 146.5 114.66 129840000 0 25884000 0 6443400 5947400 7935000 5266600 14749000 5256000 11844000 9989200 10897000 5845200 8387100 11394000 41363 5052 36975 344664;344665;344666;344667;344668;344669;344670;344671;344672;344673;344674;344675;344676 273291;273292;273293;273294;273295;273296;273297;273298;273299;273300;273301;273302;273303 273294 12 QEPISIIDQGEPK Unmodified 1452.746 0.74602373 2726 Q5H9F3 BCORL1 BCL-6 corepressor-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 65.753 65.484 2 0.027402 75078 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 46.352 27.572 8331900 0 0 0 1884400 2042100 2321500 0 0 2084000 0 0 0 0 0 0 41364 2726 36976 344677;344678;344679;344680 273304 273304 1 QEPLEEDSPSSSSAGLDK Unmodified 1874.8381 0.83814579 1021 P15408 FOSL2 Fos-related antigen 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 43.234 43.335 2 1.7626E-19 47531 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 128.22 121.99 53405000 0 0 0 7394400 4956300 0 7187200 3620400 0 6447500 8188000 0 0 5908800 9702900 41365 1021 36977 344681;344682;344683;344684;344685;344686;344687;344688;344689;344690 273305;273306;273307;273308;273309;273310;273311;273312;273313;273314 273308 10 QEPLLIGSTK Unmodified 1084.6128 0.61282471 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.468 52.611 2 0.0019943 59480 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 97.857 49.07 841270000 0 0 0 33655000 31100000 128920000 47653000 31325000 26780000 88681000 87918000 103730000 41758000 64556000 155190000 41366 1565 36978 344691;344692;344693;344694;344695;344696;344697;344698;344699;344700;344701;344702 273315;273316;273317;273318;273319;273320;273321;273322;273323;273324;273325 273315 5 QEPREEPCALGAQSVK Unmodified 1797.8679 0.86794655 202 O14686 KMT2D Histone-lysine N-methyltransferase 2D yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 36.288 36.288 3 0.0028946 40172 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 28.549 13.946 17949000 0 0 0 3045100 0 3338800 0 0 0 3259800 0 0 0 8305600 0 41367 202 36979 344703;344704;344705;344706;344707 273326;273327;273328;273329;273330 273326 5 QEPSDSPMFIINR Oxidation (M) 1548.7242 0.72424243 2075 Q02413 DSG1 Desmoglein-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 63.719 63.767 2 4.8809E-09 73429 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 111.06 111.06 138920000 0 0 0 24494000 12703000 11873000 6751900 19669000 6603400 12975000 12360000 12329000 11596000 7564200 0 41368 2075 36980 344708;344709;344710;344711;344712;344713;344714;344715;344716;344717;344718 273331;273332;273333;273334;273335;273336;273337;273338;273339;273340 273337 3371 10 QEPSDSPMFIINR Unmodified 1532.7293 0.72932781 2075 Q02413 DSG1 Desmoglein-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 76.668 76.455 2 0.0062265 88018 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 46.706 46.706 61032000 0 0 0 19383000 9896300 0 0 31753000 0 0 0 0 0 0 0 41369 2075 36980 344719;344720;344721 273341;273342;273343 273341 1 QEPSQGTTTFAVTSILR Unmodified 1834.9425 0.94249171 751 P01876 IGHA1 Ig alpha-1 chain C region yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 3 2 2 3 1 1 83.668 83.714 2;3 8.7075E-25 96413 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 134.61 113.22 389380000 0 0 0 5844200 4856000 5613000 6178500 13423000 0 283620000 24249000 19628000 14793000 3648900 7523800 41370 751 36981 344722;344723;344724;344725;344726;344727;344728;344729;344730;344731;344732;344733;344734;344735;344736;344737;344738;344739;344740;344741;344742;344743 273344;273345;273346;273347;273348;273349;273350;273351;273352;273353;273354;273355;273356;273357;273358 273346 14 QEPVKPEEGR Unmodified 1167.5884 0.58840088 1851 P61586 RHOA Transforming protein RhoA yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 9.6039 9.7165 3 0.01304 7965 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 47.844 36.68 92259000 0 0 0 6140900 5483100 6048900 7718800 7586100 5553400 7865600 0 16144000 7902700 7859200 13956000 41371 1851 36982 344744;344745;344746;344747;344748;344749;344750;344751;344752;344753;344754 273359;273360;273361;273362 273361 4 QEPVKPEEGRDMANR Unmodified 1754.837 0.83698078 1851 P61586 RHOA Transforming protein RhoA yes yes 0 0 2 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 2 1 2 1 2 1 2 2 2 1 1 1 20.013 20.22 3;4 4.9407E-06 20564 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 86.944 79.886 527020000 0 0 0 27686000 8325800 39274000 10268000 38858000 12628000 60202000 135880000 92774000 20148000 18535000 62441000 41372 1851 36983 344755;344756;344757;344758;344759;344760;344761;344762;344763;344764;344765;344766;344767;344768;344769;344770;344771;344772 273363;273364;273365;273366;273367;273368;273369;273370;273371;273372;273373;273374;273375 273364 12 QEPVKPEEGRDMANR Oxidation (M) 1770.8319 0.8318954 1851 P61586 RHOA Transforming protein RhoA yes yes 0 1 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 11.208 11.348 3 0.0020057 9704 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 59.294 52.678 112210000 0 0 0 0 4607000 10176000 7390500 9045800 8662900 11476000 0 18512000 13644000 11999000 16697000 41373 1851 36983 344773;344774;344775;344776;344777;344778;344779;344780;344781;344782 273376;273377 273377 3003 0 QEPVRSEEGR Unmodified 1185.5738 0.57381344 858 P08134 RHOC Rho-related GTP-binding protein RhoC yes yes 0 0 1 By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 6.3862 6.5327 3 0.0054578 3959 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.189 27.817 21163000 0 0 0 1731100 0 2527200 0 0 2191300 729990 4802300 4662900 876090 0 3642100 41374 858 36984 344783;344784;344785;344786;344787;344788;344789;344790 273378;273379 273378 1 QEPVRSEEGRDMANR Unmodified 1772.8224 0.82239335 858 P08134 RHOC Rho-related GTP-binding protein RhoC yes yes 0 0 2 By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.555 14.718 3 1.9274E-05 14223 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 84.173 68.786 123030000 0 0 0 3196200 6612100 9894100 4358200 7043500 8529400 15668000 15315000 12044000 9516700 10778000 20079000 41375 858 36985 344791;344792;344793;344794;344795;344796;344797;344798;344799;344800;344801;344802 273380;273381;273382 273380 3 QEPVRSEEGRDMANR Oxidation (M) 1788.8173 0.81730797 858 P08134 RHOC Rho-related GTP-binding protein RhoC yes yes 0 1 2 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 7.172 7.3185 3 0.0088968 5936 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 43.184 32.549 62140000 0 0 0 3602600 0 0 5996200 3869400 5619400 6355300 19844000 8747400 0 8105800 0 41376 858 36985 344803;344804;344805;344806;344807;344808;344809;344810 273383 273383 1082 1 QEQANNPFYIK Unmodified 1350.6568 0.65681479 193 O14617 AP3D1 AP-3 complex subunit delta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 57.392 57.052 2 1.482E-17 74176 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 178.94 150.86 296620000 0 107100000 0 11667000 12073000 12739000 15161000 22042000 10573000 16311000 18275000 21392000 19917000 14274000 15100000 41377 193 36986 344811;344812;344813;344814;344815;344816;344817;344818;344819;344820;344821;344822;344823 273384;273385;273386;273387;273388;273389;273390;273391;273392;273393;273394;273395;273396;273397 273391 14 QEQATEENAGVPVGPHLSLAYEDK Unmodified 2581.2296 0.22962518 3994 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 73.102 73.131 3 2.3353E-44 84185 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 76.21 71.664 113470000 0 0 0 7243300 6908800 16364000 5891000 7050200 13882000 0 12835000 14565000 11800000 16926000 0 41378 3994 36987 344824;344825;344826;344827;344828;344829;344830;344831;344832;344833 273398;273399;273400;273401;273402;273403;273404;273405;273406;273407;273408;273409 273398 12 QEQGVESEPLFPILK Unmodified 1712.8985 0.89850163 3550 Q8WUQ7 CACTIN Cactin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 87.236 87.395 2 0.0012989 101143 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.806 29.69 7498300 0 0 0 0 0 0 1689400 0 1194500 0 0 0 0 1885500 2728900 41379 3550 36988 344834;344835;344836;344837 273410;273411 273410 2 QEQIDNQTR Unmodified 1130.5316 0.53161428 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS 10 0 1 1 9.2384 9.1999 2 0.02741 7727 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 49.418 40.204 1025300 0 0 0 0 0 1025300 0 0 0 0 0 0 0 0 0 41380 2344 36989 344838 273412 273412 1 QEQIINTMTQDLR Oxidation (M) 1604.7828 0.78281994 965 P12270 TPR Nucleoprotein TPR yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 50.823 50.892 2 5.1569E-14 57662 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 124.42 93.001 13566000 0 0 0 0 0 13566000 0 0 0 0 0 0 0 0 0 41381 965 36990 344839;344840;344841;344842;344843;344844;344845;344846;344847 273413;273414;273415;273416;273417;273418;273419;273420;273421 273415 1268 9 QEQIINTMTQDLR Unmodified 1588.7879 0.78790532 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 75.348 75.356 2 1.3119E-13 86978 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 130.01 114.99 85599000 0 0 0 3966400 5276500 10326000 5583300 10995000 9146200 13607000 12415000 0 0 14283000 0 41382 965 36990 344848;344849;344850;344851;344852;344853;344854;344855;344856 273422;273423;273424;273425;273426;273427 273422 1 QEQIINTMTQDLRGANEK Oxidation (M) 2104.0219 0.021881014 965 P12270 TPR Nucleoprotein TPR yes yes 0 1 1 By MS/MS 2 0 1 1 50.944 45.197 3 0.00059852 58732 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 57.788 48.742 12202000 0 12202000 0 0 0 0 0 0 0 0 0 0 0 0 0 41383 965 36991 344857 273428 273428 1268 1 QEQIINTMTQDLRGANEK Unmodified 2088.027 0.026966392 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 77.619 73.869 3 1.6443E-53 92332 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145.04 132.37 103730000 0 95926000 7800500 0 0 0 0 0 0 0 0 0 0 0 0 41384 965 36991 344858;344859 273429;273430 273429 2 QEQINTEPLEDTVLSPTK Unmodified 2041.0215 0.021529888 286 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 77.69 77.535 2 0.00015113 89485 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 83.204 68.946 5961800 0 0 0 2855100 0 0 3106800 0 0 0 0 0 0 0 0 41385 286 36992 344860;344861 273431;273432 273431 2 QEQRPLPNVSTER Unmodified 1552.7958 0.79576789 4389 Q9H425 C1orf198 Uncharacterized protein C1orf198 yes yes 0 0 1 By MS/MS 10 0 1 1 31.904 32.619 3 0.026333 34592 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 24.697 18.56 5648900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5648900 41386 4389 36993 344862 273433 273433 1 QEQSYFVR Unmodified 1055.5036 0.50360861 421 O60664 PLIN3 Perilipin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.168 37.347 2 9.9003E-07 41374 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 181.49 116.68 2674600000 0 0 0 158760000 185460000 171230000 171380000 212850000 126830000 320860000 187710000 374740000 265680000 192420000 306680000 41387 421 36994 344863;344864;344865;344866;344867;344868;344869;344870;344871;344872;344873;344874 273434;273435;273436;273437;273438;273439;273440;273441;273442;273443;273444;273445 273434 5 QERETFSSAEGTVDK Unmodified 1682.7748 0.77475768 1498 P46100 ATRX Transcriptional regulator ATRX yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 29.571 29.437 3 0.0081637 31733 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 23.901 15.081 10206000 0 0 0 0 4921600 0 0 0 5284600 0 0 0 0 0 0 41388 1498 36995 344875;344876 273446;273447 273446 2 QERLDFEETENK Unmodified 1536.7056 0.70561548 4326 Q9H0E9 BRD8 Bromodomain-containing protein 8 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 36.946 37.161 3 0.00010002 40017 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 86.114 73.483 25110000 0 0 0 0 0 0 0 0 11132000 0 0 0 0 13978000 0 41389 4326 36996 344877;344878 273448;273449;273450 273450 3 QERLYVNSEK Unmodified 1264.6412 0.64116473 2463 Q14C86 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 4 2 2 23.947 19.95 2;3 0.00034115 27942 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 123.86 43.698 121520000 44102000 0 77419000 0 0 0 0 0 0 0 0 0 0 0 0 41390 2463 36997 344879;344880;344881;344882 273451;273452 273451 1 QERNFDDATMK Oxidation (M) 1369.5932 0.59322826 4008 Q99439 CNN2 Calponin-2 yes yes 0 1 1 By MS/MS 3 0 1 1 15.737 12.212 3 0.016939 15411 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 68.355 58.351 18573000 0 18573000 0 0 0 0 0 0 0 0 0 0 0 0 0 41391 4008 36998 344883 273453 273453 5494 0 QERVEVLPQAR Unmodified 1323.7259 0.72589741 2039 Q00587 CDC42EP1 Cdc42 effector protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.887 38.067 3 0.00025016 41511 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 87.568 65.912 272190000 0 0 0 13031000 17521000 16918000 23910000 23089000 16569000 22633000 25700000 38900000 31922000 14609000 27385000 41392 2039 36999 344884;344885;344886;344887;344888;344889;344890;344891;344892;344893;344894;344895 273454;273455;273456;273457;273458;273459;273460;273461;273462;273463;273464;273465 273463 10 QESDEESRPQNANYPR Unmodified 1918.8405 0.84054583 261 O15164 TRIM24 Transcription intermediary factor 1-alpha yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.879 20.082 3 3.9714E-06 20451 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 79.81 63.281 81608000 0 0 0 5470200 5393800 5694500 5463200 6058800 5274400 8399000 5144700 7440000 8858800 7094500 11316000 41393 261 37000 344896;344897;344898;344899;344900;344901;344902;344903;344904;344905;344906;344907 273466;273467;273468;273469;273470;273471;273472;273473;273474;273475;273476;273477 273470 12 QESDQLVLNQHPASDK Unmodified 1807.8701 0.87005504 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.29 2.21 1 1 19 2 2 1 2 1 2 1 2 2 2 2 1 1 38.226 37.926 2;3 1.6287E-35 41536 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 151.78 140.57 916460000 0 83791000 0 194070000 46727000 60958000 33386000 158310000 29396000 47475000 69507000 76202000 78749000 32943000 4950100 41394 1029 37001 344908;344909;344910;344911;344912;344913;344914;344915;344916;344917;344918;344919;344920;344921;344922;344923;344924;344925;344926;344927;344928 273478;273479;273480;273481;273482;273483;273484;273485;273486;273487;273488;273489;273490;273491;273492;273493 273491 14 QESENSCNKEEEPVFTR Unmodified 2081.896 0.8960118 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.206 33.391 3 4.2356E-07 36320 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 83.418 75.23 141480000 0 0 0 8977100 9076700 6147400 12051000 10287000 8508000 14709000 16331000 15085000 15752000 12820000 11735000 41395 5216 37002 344929;344930;344931;344932;344933;344934;344935;344936;344937;344938;344939;344940 273494;273495;273496;273497;273498;273499;273500;273501;273502;273503;273504;273505;273506;273507 273499 14 QESGRAGVRPSSSGSAWEACSEAPSK Unmodified 2677.2151 0.21505453 2189 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 0 0 2 By MS/MS 2 0 1 1 42.002 35.266 4 4.1766E-05 48652 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.7 41.441 19639000 19639000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41396 2189 37003 344941 273508 273508 1 QESPAPEPPTQHSYTYNVSNLDVR Unmodified 2728.2729 0.27288698 202 O14686 KMT2D Histone-lysine N-methyltransferase 2D yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 68.273 68.286 3 9.2569E-18 78422 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 82.593 61.571 48288000 0 0 0 2059800 4031100 5568100 4629300 4876900 5246600 6277600 0 6583600 5270800 3744600 0 41397 202 37004 344942;344943;344944;344945;344946;344947;344948;344949;344950;344951 273509;273510;273511;273512;273513;273514;273515;273516;273517;273518;273519;273520 273519 12 QESSQSDVGSLHSSK Unmodified 1574.7172 0.7172428 4564 Q9NQB0 TCF7L2 Transcription factor 7-like 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 13.28 12.864 3 0.0017694 12193 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 34.417 26.102 113520000 0 16148000 0 6361400 7200400 6086000 11749000 6558300 7224800 12813000 8902300 9957000 13387000 7130700 0 41398 4564 37005 344952;344953;344954;344955;344956;344957;344958;344959;344960;344961;344962;344963;344964 273521;273522;273523;273524 273524 4 QESTEYRR Unmodified 1067.4996 0.49958587 870 P08670 VIM Vimentin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 5.8449 5.9509 2 5.068E-11 3620 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 166.17 80.083 135260000 0 0 0 13121000 13195000 21376000 21344000 16412000 15890000 6531800 4749900 6259000 4790400 0 11589000 41399 870 37006 344965;344966;344967;344968;344969;344970;344971;344972;344973;344974;344975 273525;273526;273527;273528;273529;273530;273531;273532 273528 8 QESTVMVLR Oxidation (M) 1077.5488 0.54884425 4912 Q9UHX1 PUF60 Poly(U)-binding-splicing factor PUF60 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 2 2 2 1 35.263 35.421 2 0.0020087 38060 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 91.783 58.232 641440000 0 0 0 53029000 43594000 51540000 60790000 46482000 46727000 62243000 54793000 57870000 69973000 60861000 33543000 41400 4912 37007 344976;344977;344978;344979;344980;344981;344982;344983;344984;344985;344986;344987;344988;344989;344990;344991;344992;344993;344994;344995;344996;344997;344998 273533;273534;273535;273536;273537;273538;273539;273540;273541;273542;273543;273544;273545;273546;273547;273548;273549;273550;273551;273552;273553;273554;273555 273547 6269 20 QESTVMVLR Unmodified 1061.5539 0.55392962 4912 Q9UHX1 PUF60 Poly(U)-binding-splicing factor PUF60 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 48.695 48.312 2 8.8626E-06 54312 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 169.06 87.68 792560000 0 92270000 0 46513000 44011000 57483000 53643000 56179000 42978000 80745000 80279000 0 60349000 70727000 107390000 41401 4912 37007 344999;345000;345001;345002;345003;345004;345005;345006;345007;345008;345009;345010;345011 273556;273557;273558;273559;273560;273561;273562;273563;273564;273565;273566;273567 273562 8 QETELSPEMISSGSWR Unmodified 1835.836 0.83597772 5090 Q9Y285 FARSA Phenylalanine--tRNA ligase alpha subunit yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 78.475 78.629 2 2.9077E-27 90495 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 146.36 105.86 34114000 0 0 0 0 0 3271100 0 4128100 0 0 4182200 6995800 0 4562900 10974000 41402 5090 37008 345012;345013;345014;345015;345016;345017 273568;273569;273570;273571 273569 4 QETESLHGSSGK Unmodified 1258.579 0.5789584 4661 Q9NV70 EXOC1 Exocyst complex component 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 7.4281 4.1274 2 6.3234E-06 6192 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.13 99.092 20833000 0 20833000 0 0 0 0 0 0 0 0 0 0 0 0 0 41403 4661 37009 345018;345019 273572;273573 273572 2 QETEVELYNEFPEPIK Unmodified 1963.9415 0.94148865 1647 P51149 RAB7A Ras-related protein Rab-7a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.5 1.88 1 1 28 2 2 2 2 2 3 2 3 3 3 2 2 2 84.09 83.893 2;3 6.0548E-216 96215 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 284.15 262.28 1132700000 0 268080000 0 10311000 47221000 65558000 39994000 70119000 54010000 99858000 123110000 107780000 52745000 74488000 119410000 41404 1647 37010 345020;345021;345022;345023;345024;345025;345026;345027;345028;345029;345030;345031;345032;345033;345034;345035;345036;345037;345038;345039;345040;345041;345042;345043;345044;345045;345046;345047;345048;345049 273574;273575;273576;273577;273578;273579;273580;273581;273582;273583;273584;273585;273586;273587;273588;273589;273590;273591;273592 273589 19 QETFDAGLQAFQQEGIANITALK Unmodified 2492.2547 0.25471772 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 97.062 92.788 2;3 1.7757E-138 114562 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 154.79 144.11 107810000 0 107810000 0 0 0 0 0 0 0 0 0 0 0 0 0 41405 2344 37011 345050;345051;345052 273593;273594;273595;273596 273593 4 QETHCQSTPLK Unmodified 1327.619 0.61904908 4577 Q9NQW6 ANLN Actin-binding protein anillin yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 10.47 10.587 3 0.037145 8484 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.87 26.146 61240000 0 0 0 4749000 4213600 6697700 5478100 4084500 3312800 5439200 0 6864100 6793300 6533100 7074600 41406 4577 37012 345053;345054;345055;345056;345057;345058;345059;345060;345061;345062;345063 273597;273598 273598 2 QETTFLAFK Unmodified 1083.5601 0.56006086 3775 Q96CB8 INTS12 Integrator complex subunit 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 71.892 71.936 2 0.036919 82685 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 45.489 16.388 28711000 0 0 0 2000500 2476200 0 2878800 2387600 2617300 3741600 2913600 4131900 2351800 3211700 0 41407 3775 37013 345064;345065;345066;345067;345068;345069;345070;345071;345072;345073 273599 273599 1 QETTHGQTINTTR Unmodified 1485.7172 0.71718322 95 CON__Q5D862;Q5D862 FLG2 Filaggrin-2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 2 2 2 2 2 1 1 2 1 1 1 10.42 10.504 2;3 0.00086919 8960 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 58.32 52.238 + 142300000 0 0 0 31429000 6738500 8272400 12323000 16715000 5011300 10189000 0 25860000 13300000 7702100 4756300 41408 95 37014 345074;345075;345076;345077;345078;345079;345080;345081;345082;345083;345084;345085;345086;345087;345088;345089;345090 273600;273601;273602;273603;273604;273605;273606;273607;273608;273609 273609 6 QETVADFTPK Unmodified 1134.5557 0.55570376 494 O75400 PRPF40A Pre-mRNA-processing factor 40 homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 48.124 47.83 2 1.2357E-09 54893 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 143.7 121.47 1460800000 0 71955000 0 80763000 67157000 77281000 119040000 76684000 104300000 165570000 142560000 126760000 118830000 118680000 191210000 41409 494 37015 345091;345092;345093;345094;345095;345096;345097;345098;345099;345100;345101;345102;345103 273610;273611;273612;273613;273614;273615;273616;273617;273618;273619;273620;273621;273622;273623;273624 273623 13 QETVAQAALLTEREER Unmodified 1842.9436 0.94355434 4199 Q9BW19 KIFC1 Kinesin-like protein KIFC1 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 59.126 59.138 3 0.0082399 66667 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 27.149 20.421 27516000 0 0 0 2304100 2434900 4839200 2790900 3453000 0 0 4354400 0 0 0 7339100 41410 4199 37016 345104;345105;345106;345107;345108;345109;345110 273625;273626;273627;273628;273629 273627 5 QETWMLMELQK 2 Oxidation (M) 1467.6738 0.67378676 1029 P15924 DSP Desmoplakin yes yes 0 2 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 66.02 65.894 2 0.0017468 75185 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 59.153 44.946 13792000 0 0 0 6144700 0 0 0 6156600 0 1490700 0 0 0 0 0 41411 1029 37017 345111;345112;345113 273630;273631 273630 1442;1443 2 QETWMLMELQK Oxidation (M) 1451.6789 0.67887214 1029 P15924 DSP Desmoplakin yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 77.771 77.629 2 0.00021585 90081 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 89.08 66.008 11086000 0 0 0 5219400 0 0 0 5866500 0 0 0 0 0 0 0 41412 1029 37017 345114;345115 273632;273633 273633 1442;1443 2 QEVAVFVFDK Unmodified 1180.6128 0.61282471 2932 Q6P3W7 SCYL2 SCY1-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.311 79.355 2 0.0017238 90883 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 89.08 74.565 112560000 0 0 0 5176900 5101000 13666000 9509300 10266000 10666000 16506000 8936700 14599000 10424000 7705200 0 41413 2932 37018 345116;345117;345118;345119;345120;345121;345122;345123;345124;345125;345126 273634;273635;273636;273637;273638;273639;273640;273641 273638 8 QEVDLQQLIR Unmodified 1240.6776 0.67755023 400 O60443 DFNA5 Non-syndromic hearing impairment protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 78.625 78.7 2 0.0018817 90877 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 96.668 25.749 43578000 0 0 0 0 5845500 8604300 3976700 4740600 0 9220500 6090900 5099800 0 0 0 41414 400 37019 345127;345128;345129;345130;345131;345132;345133;345134 273642;273643;273644 273642 3 QEVENFK Unmodified 892.42905 0.42904669 2961 Q6PKG0;Q659C4 LARP1;LARP1B La-related protein 1;La-related protein 1B yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.696 19.897 2 0.025135 19122 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.381 23.918 100000000 0 0 0 5345000 5785600 8856300 7291500 2111800 8052800 12022000 10727000 11311000 6684200 9774500 12039000 41415 2961 37020 345135;345136;345137;345138;345139;345140;345141;345142;345143;345144;345145;345146 273645;273646;273647;273648;273649 273646 5 QEVIGDQADK Unmodified 1101.5302 0.53021729 4814 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 17.979 18.168 2 0.0099222 18436 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 56.916 24.98 28130000 0 0 0 1633900 1581400 1876300 2042200 1853800 1349500 2259400 3246500 4015700 2329100 2223600 3718900 41416 4814 37021 345147;345148;345149;345150;345151;345152;345153;345154;345155;345156;345157;345158 273650;273651;273652;273653;273654;273655;273656;273657 273650 8 QEVIITK Unmodified 829.49092 0.49091866 2411 Q14527 HLTF Helicase-like transcription factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.245 27.443 2 0.031733 29599 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 122.74 57.985 1040200000 0 0 0 54327000 71813000 91653000 81268000 82058000 71812000 112920000 118710000 108750000 91922000 79151000 75774000 41417 2411 37022 345159;345160;345161;345162;345163;345164;345165;345166;345167;345168;345169;345170 273658;273659 273659 1 QEVISTSSK Unmodified 977.50294 0.50293991 1950 P63244 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 15.101 14.545 2 0.0012668 13375 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 142.56 95.796 168050000 50205000 0 0 15889000 3322200 0 0 0 0 0 24510000 0 0 23353000 50774000 41418 1950 37023 345171;345172;345173;345174;345175;345176;345177 273660;273661;273662;273663;273664;273665;273666 273663 7 QEVPIIIVFR Unmodified 1212.723 0.72304386 1291 P30876 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 90.476 90.539 2 0.0080536 104920 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 60.973 42.193 18584000 0 0 0 1152500 0 2731900 2201200 0 2004100 3763200 0 0 0 1993500 4737600 41419 1291 37024 345178;345179;345180;345181;345182;345183;345184 273667;273668 273668 2 QEVPLATLEPLVK Unmodified 1435.8286 0.82863115 4025 Q99574 SERPINI1 Neuroserpin yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 85.854 85.93 2 0.0020357 99799 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.518 49.995 17569000 0 0 0 0 1185000 1228900 0 0 0 1831700 2865400 3334200 0 2250700 4872700 41420 4025 37025 345185;345186;345187;345188;345189;345190;345191 273669;273670;273671;273672;273673;273674 273674 6 QEVQAWDGEVR Unmodified 1315.6157 0.61567826 1488 P45974 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 47.063 47.297 2 0.00035827 53202 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 112.75 77.31 115980000 0 0 0 0 4111600 13803000 4013500 3989200 4717300 13999000 13373000 10128000 6927200 10078000 30842000 41421 1488 37026 345192;345193;345194;345195;345196;345197;345198;345199;345200;345201;345202 273675;273676;273677;273678;273679;273680;273681;273682;273683;273684;273685 273676 9 QEVQAWDGEVRQVSK Unmodified 1757.8697 0.86966111 1488 P45974 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 54.275 49.406 3 0.017715 66703 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.812 37.748 84651000 0 73965000 10685000 0 0 0 0 0 0 0 0 0 0 0 0 41422 1488 37027 345203;345204;345205;345206 273686;273687;273688 273687 2 QEVTAIER Unmodified 944.49271 0.49270958 4616 Q9NRY5 FAM114A2 Protein FAM114A2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 23.853 24.016 2 0.02509 24980 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 58.981 9.0477 65158000 0 0 0 4088000 4305100 5140500 4712800 5215400 3644000 6947700 7686000 0 8508900 4829400 10080000 41423 4616 37028 345207;345208;345209;345210;345211;345212;345213;345214;345215;345216;345217 273689;273690;273691;273692;273693;273694;273695;273696 273695 8 QEVVDLLLAR Unmodified 1154.6659 0.66592292 3250 Q8IWZ3 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 83.841 83.947 2 0.0013971 97236 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 105.52 65.417 74757000 0 0 0 0 5260900 8067700 6053200 5067700 5402900 9384700 5829900 8615300 5709200 5542600 9822500 41424 3250 37029 345218;345219;345220;345221;345222;345223;345224;345225;345226;345227;345228 273697;273698;273699;273700;273701;273702;273703;273704;273705;273706;273707 273702 11 QEVVDVMK Oxidation (M) 962.47428 0.47428232 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 1 0 By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 23.645 23.863 2 0.031415 25108 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 47.743 19.636 17186000 0 0 0 0 1528100 2090900 1502800 1477600 1775100 1643200 2228000 2205400 0 0 2735100 41425 2291 37030 345229;345230;345231;345232;345233;345234;345235;345236;345237 273708 273708 1 QEWGPGQK Unmodified 928.44028 0.44028008 2945 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 20.422 19.962 2 0.010032 24734 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.44 98.252 123590000 0 31038000 0 4573100 4933900 6366700 7274000 4335700 6037300 10113000 11824000 14467000 11793000 10831000 0 41426 2945 37031 345238;345239;345240;345241;345242;345243;345244;345245;345246;345247;345248;345249;345250 273709;273710;273711;273712;273713;273714;273715;273716;273717;273718 273712 9 QEWNPTMNK Oxidation (M) 1162.5077 0.50770771 3879 Q96IK1 BOD1 Biorientation of chromosomes in cell division protein 1 yes yes 0 1 0 By MS/MS 2 0 1 1 30.2 25.807 2 0.041478 33897 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.426 44.778 9545100 0 9545100 0 0 0 0 0 0 0 0 0 0 0 0 0 41427 3879 37032 345251 273719 273719 1 QEWNPTMNK Unmodified 1146.5128 0.51279309 3879 Q96IK1 BOD1 Biorientation of chromosomes in cell division protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 36.575 36.915 2 0.021858 40858 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 80.165 53.035 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41428 3879 37032 345252 273720 273720 1 QEYDESGPSIVHR Unmodified 1515.6954 0.69538514 1951;1815 P60709;Q6S8J3;A5A3E0;P0CG38;Q9BYX7;P0CG39;P63261 ACTB;POTEE;POTEF;POTEI;POTEKP;POTEJ;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;POTE ankyrin domain family member J;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 2 24 1 1 2 2 2 2 2 2 2 2 2 2 2 2 36.366 36.139 2;3 1.5531E-177 38972 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 250.72 240.2 22432000000 20867000 0 6384000 1745200000 1521300000 1678300000 1609700000 1355300000 1002200000 1797500000 2039100000 3389000000 1978900000 1799900000 2488900000 41429 1815;1951 37033 345253;345254;345255;345256;345257;345258;345259;345260;345261;345262;345263;345264;345265;345266;345267;345268;345269;345270;345271;345272;345273;345274;345275;345276;345277;345278 273721;273722;273723;273724;273725;273726;273727;273728;273729;273730;273731;273732;273733;273734;273735;273736;273737;273738;273739;273740;273741;273742;273743;273744;273745;273746;273747;273748;273749;273750;273751;273752;273753;273754;273755;273756;273757;273758;273759;273760;273761;273762;273763;273764;273765;273766;273767;273768;273769;273770 273757 41 QEYDESGPSIVHRK Unmodified 1643.7903 0.79034816 1951;1815 P60709;Q6S8J3;A5A3E0;P0CG38;Q9BYX7;P0CG39;P63261 ACTB;POTEE;POTEF;POTEI;POTEKP;POTEJ;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;POTE ankyrin domain family member J;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.05 3.82 1 24 5 50 17 7 6 4 4 3 3 5 5 5 5 3 4 5 4 30.726 29.681 2;3;4 4.7983E-172 40677 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 248.42 231.79 66487000000 17292000000 664290000 3698000000 2152200000 2870500000 4199700000 3576900000 3421600000 1610400000 3217200000 4703100000 5292500000 4766000000 4187000000 4836200000 41430 1815;1951 37034 345279;345280;345281;345282;345283;345284;345285;345286;345287;345288;345289;345290;345291;345292;345293;345294;345295;345296;345297;345298;345299;345300;345301;345302;345303;345304;345305;345306;345307;345308;345309;345310;345311;345312;345313;345314;345315;345316;345317;345318;345319;345320;345321;345322;345323;345324;345325;345326;345327;345328;345329;345330;345331;345332;345333;345334;345335;345336;345337;345338;345339;345340;345341;345342;345343;345344;345345;345346;345347;345348;345349;345350;345351;345352;345353;345354;345355;345356;345357;345358 273771;273772;273773;273774;273775;273776;273777;273778;273779;273780;273781;273782;273783;273784;273785;273786;273787;273788;273789;273790;273791;273792;273793;273794;273795;273796;273797;273798;273799;273800;273801;273802;273803;273804;273805;273806;273807;273808;273809;273810;273811;273812;273813;273814;273815;273816;273817;273818;273819;273820;273821;273822;273823;273824;273825;273826;273827;273828;273829;273830;273831;273832;273833;273834;273835;273836;273837;273838;273839;273840;273841;273842;273843;273844;273845;273846;273847;273848;273849;273850;273851;273852;273853;273854;273855;273856;273857;273858;273859;273860;273861;273862;273863;273864;273865;273866 273817 81 QEYEQLIAK Unmodified 1120.5764 0.57643921 1354 P35527;CON__P35527 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 47.888 47.998 2 1.0694E-51 53803 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 214.81 148.38 + 4846100000 0 0 0 609990000 293890000 333080000 199720000 1087800000 220150000 475910000 427380000 383460000 542030000 272600000 0 41431 1354 37035 345359;345360;345361;345362;345363;345364;345365;345366;345367;345368;345369 273867;273868;273869;273870;273871;273872;273873;273874;273875;273876;273877;273878;273879 273871 12 QEYLNEYEAEK Unmodified 1414.6252 0.62523989 3714 Q969G3 SMARCE1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 45.843 43.146 2 5.2524E-06 54940 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 142 121.22 159790000 0 134350000 0 0 0 0 0 25440000 0 0 0 0 0 0 0 41432 3714 37036 345370;345371;345372 273880;273881;273882 273880 3 QEYVLNESGR Unmodified 1193.5677 0.56766543 1146 P22735 TGM1 Protein-glutamine gamma-glutamyltransferase K yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 34.863 34.954 2 0.0019826 38425 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 111.61 84.353 112780000 0 0 0 43008000 5546100 10966000 6675500 14025000 6043100 7835900 10045000 8637300 0 0 0 41433 1146 37037 345373;345374;345375;345376;345377;345378;345379;345380;345381;345382 273883;273884;273885;273886;273887;273888;273889;273890;273891 273885 9 QFAAATIQTIGR Unmodified 1275.6935 0.69353465 128 O00203 AP3B1 AP-3 complex subunit beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.541 64.63 2 0.00099499 73204 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.658 46.366 117250000 0 0 0 5696800 4938600 9605500 6274700 8184400 5785500 14515000 9439600 16546000 11392000 8139900 16733000 41434 128 37038 345383;345384;345385;345386;345387;345388;345389;345390;345391;345392;345393;345394 273892;273893;273894;273895;273896;273897;273898;273899;273900;273901;273902;273903;273904;273905 273895 13 QFAALVASK Unmodified 933.52837 0.5283668 4011 Q99460 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 49.533 49.676 2 0.0030625 55872 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 91.867 34.586 437430000 0 0 0 23284000 37203000 59152000 11611000 14407000 10128000 62832000 80075000 93979000 0 15778000 28984000 41435 4011 37039 345395;345396;345397;345398;345399;345400;345401;345402;345403;345404;345405 273906;273907;273908;273909;273910;273911;273912;273913;273914;273915;273916;273917;273918;273919;273920 273908 15 QFAAQEEK Unmodified 949.45051 0.45051041 4365 Q9H2G2 SLK STE20-like serine/threonine-protein kinase yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 13.374 12.956 2 0.0056658 15392 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.4 82.506 199340000 0 159530000 0 0 3027700 3976500 3493200 0 2073500 4617200 3288500 6718700 2796700 3168600 6644200 41436 4365 37040 345406;345407;345408;345409;345410;345411;345412;345413;345414;345415;345416;345417 273921;273922;273923;273924 273923 4 QFAEGSTLK Unmodified 979.49746 0.4974606 4387 Q9H3U1 UNC45A Protein unc-45 homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 29.129 28.486 2 0.0095702 31107 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 66.351 47.569 184950000 0 100270000 1942200 9743700 0 0 0 10369000 0 16013000 0 13142000 10742000 7897700 14828000 41437 4387 37041 345418;345419;345420;345421;345422;345423;345424;345425;345426 273925;273926;273927;273928;273929;273930;273931 273931 7 QFAEMYVAK Unmodified 1085.5216 0.52156686 980 P13639 EEF2 Elongation factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 54.168 52.852 2 0.0011072 68378 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.09 108.79 3725300000 118430000 2712400000 53748000 25485000 14618000 23477000 17153000 23221000 11766000 37265000 120310000 152140000 28234000 55163000 331930000 41438 980 37042 345427;345428;345429;345430;345431;345432;345433;345434;345435;345436;345437;345438;345439;345440;345441;345442 273932;273933;273934;273935;273936;273937;273938;273939;273940;273941;273942;273943;273944;273945 273934 11 QFAEMYVAK Oxidation (M) 1101.5165 0.51648149 980 P13639 EEF2 Elongation factor 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 6.54 3.75 3 3 7 2 3 1 1 1 1 1 1 1 1 41.511 39.273 2 0.0065414 43482 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 65.313 47.755 1827800000 141830000 1438200000 66350000 14818000 9334400 0 0 0 0 0 33088000 28950000 11749000 26011000 57448000 41439 980 37042 345443;345444;345445;345446;345447;345448;345449;345450;345451;345452;345453;345454;345455 273946;273947;273948;273949;273950;273951;273952;273953 273952 1315 6 QFAFVNFK Unmodified 999.5178 0.51780212 5223 Q9Y580 RBM7 RNA-binding protein 7 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 78.545 78.686 2 0.031664 91011 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 54.787 29.05 20767000 0 0 0 0 0 5177500 0 3294300 0 3711200 0 3797700 0 0 4786800 41440 5223 37043 345456;345457;345458;345459;345460 273954 273954 1 QFAPEYEK Unmodified 1010.4709 0.4709115 982 P13667 PDIA4 Protein disulfide-isomerase A4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 33.273 33.512 2 0.0074056 35670 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 89.752 68.224 233990000 0 0 0 0 19721000 0 17880000 22516000 13968000 23830000 0 27767000 25154000 26886000 56271000 41441 982 37044 345461;345462;345463;345464;345465;345466;345467;345468;345469;345470 273955;273956;273957;273958;273959;273960;273961;273962;273963 273961 9 QFAQALRK Unmodified 960.5505 0.55049923 433 O60825 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.602 21.807 2 0.017542 22905 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 119.56 88.945 163270000 0 0 0 8604700 13531000 22863000 17338000 7551800 12361000 15840000 12559000 16006000 13789000 11985000 10844000 41442 433 37045 345471;345472;345473;345474;345475;345476;345477;345478;345479;345480;345481;345482 273964;273965;273966;273967 273964 1 QFASQANVVGPWIQTK Unmodified 1772.921 0.9209684 356 O43707 ACTN4 Alpha-actinin-4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.588 79.646 2 3.4335E-31 91668 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 187.62 172.42 239840000 0 0 0 5746200 5329700 17035000 5871200 7832800 5379800 15982000 34346000 30854000 8104900 19426000 83931000 41443 356 37046 345483;345484;345485;345486;345487;345488;345489;345490;345491;345492;345493;345494 273968;273969;273970;273971;273972;273973;273974;273975;273976;273977;273978;273979 273971 12 QFDAGTVNYEQPTK Unmodified 1596.742 0.74200098 1699 P52756 RBM5 RNA-binding protein 5 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 49.161 48.202 2 1.6454E-09 60372 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 135.99 119.79 27101000 0 8304800 0 0 0 0 2861500 0 0 5935300 6326800 0 3673000 0 0 41444 1699 37047 345495;345496;345497;345498;345499;345500 273980;273981;273982 273981 3 QFDAVLPGYTLK Unmodified 1350.7184 0.71835242 202 O14686 KMT2D Histone-lysine N-methyltransferase 2D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.713 80.773 2 0.039943 93283 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 47.706 37.182 62149000 0 0 0 2662500 3509900 3945700 4905700 5177700 4749100 6457100 5081800 6237600 4855900 4971500 9594700 41445 202 37048 345501;345502;345503;345504;345505;345506;345507;345508;345509;345510;345511;345512 273983;273984 273984 2 QFDIQLLTHNDPK Unmodified 1567.7995 0.79945628 1541 P48507 GCLM Glutamate--cysteine ligase regulatory subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 81.425 76.289 3 0.015076 93680 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 32.275 23.081 73537000 21539000 45830000 6168300 0 0 0 0 0 0 0 0 0 0 0 0 41446 1541 37049 345513;345514;345515 273985;273986;273987 273987 3 QFEDELHPDLK Unmodified 1369.6514 0.65139506 5157 Q9Y3C6 PPIL1 Peptidyl-prolyl cis-trans isomerase-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.336 55.465 3 0.044892 62071 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.616 19.608 211570000 0 0 0 9818600 10646000 14744000 13626000 12938000 10303000 20286000 29762000 23478000 16639000 16393000 32940000 41447 5157 37050 345516;345517;345518;345519;345520;345521;345522;345523;345524;345525;345526;345527 273988 273988 0 QFEGLVDDCEYK Unmodified 1501.6395 0.63950975 2529 Q15398 DLGAP5 Disks large-associated protein 5 yes yes 0 0 0 By MS/MS 2 0 1 1 66.702 60.785 2 7.7279E-05 77758 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.283 83.058 19776000 0 19776000 0 0 0 0 0 0 0 0 0 0 0 0 0 41448 2529 37051 345528 273989 273989 1 QFELSEQTK Unmodified 1108.5401 0.5400537 2922 Q6P1N9 TATDN1 Putative deoxyribonuclease TATDN1 yes yes 0 0 0 By MS/MS 2 0 1 1 30.183 24.464 2 0.040392 34209 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.59 2.4225 49651000 49651000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41449 2922 37052 345529 273990 273990 1 QFEPNDFYLK Unmodified 1299.6136 0.61355299 4371 Q9H2P0 ADNP Activity-dependent neuroprotector homeobox protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.002 75.061 2 0.029209 86628 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 46.457 31.076 60480000 0 0 0 2738300 5365400 5101800 4199600 4512600 4981100 4297200 4347600 5839800 4689600 3754800 10653000 41450 4371 37053 345530;345531;345532;345533;345534;345535;345536;345537;345538;345539;345540;345541 273991 273991 1 QFESLPATHIR Unmodified 1297.6779 0.67788459 583 O94776 MTA2 Metastasis-associated protein MTA2 yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 50.91 51.061 3 0.0094379 57524 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 36.982 29.813 560230000 0 0 0 38617000 32252000 70662000 43531000 36413000 36352000 56212000 41346000 54266000 46254000 44575000 59753000 41451 583 37054 345542;345543;345544;345545;345546;345547;345548;345549;345550;345551;345552;345553 273992;273993;273994 273992 1 QFETESEVK Unmodified 1095.5084 0.50841922 4580 Q9NQX4 MYO5C Unconventional myosin-Vc yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 24.553 24.659 2 0.017618 26018 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 55.531 40.861 29532000 0 0 0 3635900 3577800 2940200 3475700 2845500 0 3720100 3651800 0 3554600 2130700 0 41452 4580 37055 345554;345555;345556;345557;345558;345559;345560;345561;345562 273995;273996;273997 273995 3 QFFFINR Unmodified 970.50249 0.5024864 1739 P54278 PMS2 Mismatch repair endonuclease PMS2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 78.07 78.221 2 0.023833 90315 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 84.025 49.32 33982000 0 0 0 0 0 4689000 0 3682400 3398100 0 3541700 4014500 3893700 4146000 6616300 41453 1739 37056 345563;345564;345565;345566;345567;345568;345569;345570 273998;273999 273999 2 QFFPFGDPTK Unmodified 1182.571 0.5709599 1874 P62166 NCS1 Neuronal calcium sensor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81.484 80.613 2 0.010195 93063 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.434 41.569 70000000 16975000 11502000 0 1435900 2701300 3192800 3465200 2816400 2154900 4905300 4872400 4090700 1712400 3116600 7059200 41454 1874 37057 345571;345572;345573;345574;345575;345576;345577;345578;345579;345580;345581;345582;345583;345584 274000;274001;274002;274003;274004;274005;274006;274007;274008;274009 274003 10 QFFPTDEDEIGAAK Unmodified 1566.7202 0.72020291 287 O15460 P4HA2 Prolyl 4-hydroxylase subunit alpha-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 70.263 70.51 2 0.00052715 80377 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.93 50.494 23384000 0 0 0 0 0 0 0 0 0 3383800 5230400 4935100 2343500 2470400 5020900 41455 287 37058 345585;345586;345587;345588;345589;345590 274010;274011;274012;274013;274014 274011 5 QFFVAVER Unmodified 994.52362 0.52361577 1400 P38919 EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.779 64.869 2 0.026431 74308 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 57.96 43.184 81357000 0 0 0 4208500 4231900 7553500 8001100 8071600 4445100 9020000 8493900 7763000 5292100 5147200 9129300 41456 1400 37059 345591;345592;345593;345594;345595;345596;345597;345598;345599;345600;345601;345602 274015;274016;274017;274018;274019 274018 5 QFGAQANVIGPWIQTK Unmodified 1756.9261 0.92605378 971 P12814 ACTN1 Alpha-actinin-1 yes yes 0 0 0 By MS/MS By MS/MS 7.33 3.77 1 2 1 2 85.463 82.88 2;3 8.2991E-31 105202 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 158.34 143.92 43043000 21897000 0 0 0 0 0 0 0 0 0 0 0 0 0 21146000 41457 971 37060 345603;345604;345605 274020;274021;274022;274023 274023 4 QFGYQDSPGPR Unmodified 1250.568 0.56799978 1045 P17028 ZNF24 Zinc finger protein 24 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 37.56 37.881 2 0.0029449 42021 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 65.347 47.527 5560500 0 0 0 0 0 0 0 0 0 0 0 0 3660000 1900500 0 41458 1045 37061 345606;345607;345608;345609 274024;274025;274026;274027 274026 3 QFHETAEPISDFLSVTEK Unmodified 2077.0004 0.0004005156 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS 2 0 1 1 87.257 84.822 3 0.018757 102717 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 28.869 19.586 1609600 0 0 1609600 0 0 0 0 0 0 0 0 0 0 0 0 41459 5049 37062 345610 274028;274029 274029 2 QFIAAQGSSR Unmodified 1063.5411 0.54105675 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.2 3.92 3 2 1 1 1 1 1 27.353 24.989 2 6.7626E-05 34561 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 123.21 87.714 572850000 227580000 142130000 7552600 0 0 0 0 0 0 0 0 92206000 0 0 103380000 41460 848 37063 345611;345612;345613;345614;345615 274030;274031;274032 274031 3 QFIAAQNLGPASGHGTPASSPSSSSLPSPMSPTPR Oxidation (M) 3434.6525 0.65248106 3581 Q8WX93 PALLD Palladin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 73.028 73.117 3 2.4514E-66 83814 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.949 85.404 308590000 0 0 0 17933000 0 40926000 23698000 21583000 24869000 42566000 31726000 0 26037000 27101000 52147000 41461 3581 37064 345616;345617;345618;345619;345620;345621;345622;345623;345624;345625 274033;274034;274035;274036;274037;274038;274039;274040;274041;274042;274043;274044 274037 5080 12 QFIAAQNLGPASGHGTPASSPSSSSLPSPMSPTPR Unmodified 3418.6576 0.65756643 3581 Q8WX93 PALLD Palladin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.996 77.105 3 5.2338E-188 88624 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 172.64 155.3 124050000 0 0 0 0 4182900 7210700 4320100 8845900 4565900 11410000 11066000 10775000 4119200 10759000 46797000 41462 3581 37064 345626;345627;345628;345629;345630;345631;345632;345633;345634;345635;345636 274045;274046;274047;274048;274049;274050;274051;274052;274053;274054;274055 274048 11 QFIDSNPNQPLVILEMESGASAK Oxidation (M) 2503.2265 0.22645406 1578 P49588 AARS Alanine--tRNA ligase, cytoplasmic yes yes 0 1 0 By MS/MS 2.5 0.5 2 2 4 91.859 87.797 2;3 2.9787E-15 105203 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 88.627 80.915 152830000 0 152830000 0 0 0 0 0 0 0 0 0 0 0 0 0 41463 1578 37065 345637;345638;345639;345640 274056;274057;274058;274059 274058 2540 4 QFIDSNPNQPLVILEMESGASAK Unmodified 2487.2315 0.23153944 1578 P49588 AARS Alanine--tRNA ligase, cytoplasmic yes yes 0 0 0 By matching By MS/MS By MS/MS 2 0 4 1 2 1 97.149 92.082 2;3 4.4216E-125 113974 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 244.05 213.74 176240000 47583000 124490000 4168400 0 0 0 0 0 0 0 0 0 0 0 0 41464 1578 37065 345641;345642;345643;345644 274060;274061;274062 274060 2 QFILTNHDGSTPSK Unmodified 1543.7631 0.76307078 976 P13056 NR2C1 Nuclear receptor subfamily 2 group C member 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 47.488 41.63 3 0.00042049 57937 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.588 65.544 19482000 15377000 0 4104700 0 0 0 0 0 0 0 0 0 0 0 0 41465 976 37066 345645;345646 274063 274063 1 QFILVMNALDNR Unmodified 1432.7497 0.74966932 4857 Q9UBT2 UBA2 SUMO-activating enzyme subunit 2 yes yes 0 0 0 By MS/MS 10 0 1 1 87.535 87.685 2 0.0033909 101379 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.518 39.071 3383700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3383700 41466 4857 37067 345647 274064 274064 1 QFINLMLPMK 2 Oxidation (M) 1265.6512 0.65120083 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 2 1 1 1 1 1 1 1 1 80.195 80.062 2 0.0026598 92640 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 60.59 26.793 11911000 0 0 0 3239800 2932000 5003400 0 0 736100 0 0 0 0 0 0 41467 1986 37068 345648;345649;345650;345651;345652;345653;345654;345655;345656;345657;345658;345659 274065;274066;274067;274068;274069;274070;274071;274072;274073;274074 274074 3231;3232 10 QFINLMLPMK Unmodified 1233.6614 0.66137158 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS 10 0 1 1 89.925 90.064 2 0.022591 104267 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.177 36.276 2726500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2726500 41468 1986 37068 345660 274075 274075 1 QFIQGPPEVIR Unmodified 1282.7034 0.70337105 4638 Q9NTX5 ECHDC1 Ethylmalonyl-CoA decarboxylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.524 71.596 2 0.00037948 82746 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 87.308 76.478 71692000 0 0 0 4843600 3922400 7024900 4097200 4273100 2623100 7563000 10955000 6289200 3685800 5837400 10577000 41469 4638 37069 345661;345662;345663;345664;345665;345666;345667;345668;345669;345670;345671;345672 274076;274077;274078;274079;274080;274081;274082;274083;274084;274085;274086;274087 274087 12 QFLECAQNQGDIK Unmodified 1549.7195 0.7194914 5283 Q9Y6H1;Q5T1J5 CHCHD2;CHCHD2P9 Coiled-coil-helix-coiled-coil-helix domain-containing protein 2;Putative coiled-coil-helix-coiled-coil-helix domain-containing protein CHCHD2P9, mitochondrial yes no 0 0 0 By MS/MS 2.5 0.5 1 1 2 52.907 47.563 2 6.1468E-30 61588 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 194.43 154.43 121810000 0 121810000 0 0 0 0 0 0 0 0 0 0 0 0 0 41470 5283 37070 345673;345674 274088 274088 1 QFLESSELPR Unmodified 1204.6088 0.60880197 428 O60749 SNX2 Sorting nexin-2 yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS 10 0 5 1 1 1 1 1 62.16 62.225 2 0.025149 70314 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.645 49.753 36000000 0 0 0 4468100 0 0 5490300 0 0 8560100 0 0 7680200 0 9801700 41471 428 37071 345675;345676;345677;345678;345679 274089;274090 274090 0 QFLEVWEK Unmodified 1077.5495 0.54949617 987 P13798 APEH Acylamino-acid-releasing enzyme yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 75.494 75.327 2 0.015996 87422 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 67.981 43.058 4302400 0 0 0 2618400 0 0 0 1684000 0 0 0 0 0 0 0 41472 987 37072 345680;345681 274091 274091 1 QFLLQQASGLSSPGNNDSK Unmodified 1989.9756 0.97558275 3227 Q8IVH2 FOXP4 Forkhead box protein P4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 2 1 2 2 1 1 1 1 2 2 1 73.305 73.4 2;3 9.7881E-84 84596 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 223.06 164 241200000 0 0 0 0 30047000 12596000 17723000 25501000 10993000 14504000 24573000 17157000 37440000 33111000 17560000 41473 3227 37073 345682;345683;345684;345685;345686;345687;345688;345689;345690;345691;345692;345693;345694;345695;345696;345697 274092;274093;274094;274095;274096;274097;274098;274099;274100;274101;274102;274103;274104;274105 274103 14 QFLPFLQR Unmodified 1047.5866 0.58655038 3039 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 84.296 84.439 2 0.01982 97844 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 63.306 44.615 15117000 0 0 0 0 0 7943200 0 3001600 0 0 4172100 0 0 0 0 41474 3039 37074 345698;345699;345700 274106 274106 1 QFLQAAEAIDDIPFGITSNSDVFSK Unmodified 2712.3283 0.3282766 838 P07237 P4HB Protein disulfide-isomerase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 8 2 2 5 3 101.42 97.352 2;3 1.244E-206 115675 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 171.29 157.4 371780000 24973000 307650000 39155000 0 0 0 0 0 0 0 0 0 0 0 0 41475 838 37075 345701;345702;345703;345704;345705;345706;345707;345708;345709;345710 274107;274108;274109;274110;274111;274112;274113;274114;274115;274116 274114 10 QFLSDEQNILALR Unmodified 1545.8151 0.81510635 1406 P39880 CUX1 Homeobox protein cut-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 83.743 83.907 2 0.0001699 97185 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 83.883 60.278 34926000 0 0 0 0 0 0 0 5792400 0 9039900 4937000 5577200 0 0 9579800 41476 1406 37076 345711;345712;345713;345714;345715;345716;345717 274117;274118;274119;274120;274121;274122;274123 274117 7 QFLSQFEMQSR Oxidation (M) 1415.6503 0.65034921 2620 Q16630 CPSF6 Cleavage and polyadenylation specificity factor subunit 6 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.446 65.533 2 0.00025788 74316 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.898 76.14 171110000 0 0 0 8695200 10158000 13084000 14642000 12103000 10791000 14155000 15773000 25926000 12729000 15416000 17643000 41477 2620 37077 345718;345719;345720;345721;345722;345723;345724;345725;345726;345727;345728;345729 274124;274125;274126;274127;274128;274129;274130;274131;274132;274133;274134;274135;274136;274137 274128 4276 14 QFLSQFEMQSR Unmodified 1399.6554 0.65543458 2620 Q16630 CPSF6 Cleavage and polyadenylation specificity factor subunit 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.232 74.293 2 0.00032859 85632 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 89.047 72.67 119110000 0 0 0 5112900 5080800 7172800 4437500 11768000 8602500 11702000 10384000 12847000 8672500 8647300 24687000 41478 2620 37077 345730;345731;345732;345733;345734;345735;345736;345737;345738;345739;345740;345741 274138;274139;274140;274141;274142;274143;274144;274145;274146;274147;274148 274143 11 QFLTQLMQK Unmodified 1135.606 0.6059652 2539 Q15459 SF3A1 Splicing factor 3A subunit 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 75.079 75.302 2 0.031222 86353 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.105 27.917 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41479 2539 37078 345742;345743 274149;274150 274149 2 QFMAETQFTSGEK Oxidation (M) 1518.6661 0.66605885 2407 Q14444 CAPRIN1 Caprin-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 2 1 1 1 1 47.073 47.26 2 1.8739E-13 52795 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 138.25 129.29 405170000 0 0 0 36343000 37360000 31532000 32388000 16686000 29280000 40116000 47957000 40746000 40792000 20693000 31278000 41480 2407 37079 345744;345745;345746;345747;345748;345749;345750;345751;345752;345753;345754;345755;345756 274151;274152;274153;274154;274155;274156;274157;274158;274159;274160;274161;274162;274163;274164;274165;274166;274167 274157 3947 16 QFMAETQFTSGEK Unmodified 1502.6711 0.67114423 2407 Q14444 CAPRIN1 Caprin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 57.656 57.774 2 4.301E-62 65973 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 185.18 165.42 743550000 0 0 0 46573000 45009000 64933000 37445000 39129000 41554000 66656000 85969000 80783000 61750000 61741000 112010000 41481 2407 37079 345757;345758;345759;345760;345761;345762;345763;345764;345765;345766;345767;345768 274168;274169;274170;274171;274172;274173;274174;274175;274176;274177;274178;274179;274180;274181;274182;274183;274184;274185;274186 274179 19 QFNVEVLK Unmodified 975.53893 0.53893149 2793 Q5TBA9 FRY Protein furry homolog yes yes 0 0 0 By MS/MS 10 0 1 1 55.337 55.399 2 0.032055 62788 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 54.549 6.2663 6536600 0 0 0 0 0 6536600 0 0 0 0 0 0 0 0 0 41482 2793 37080 345769 274187 274187 1 QFPLEESSCEK Unmodified 1352.5918 0.59183127 2955 Q6PIJ6 FBXO38 F-box only protein 38 yes yes 0 0 0 By MS/MS 2 0 1 1 51.367 45.621 2 0.0015534 59250 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.806 66.343 21570000 0 21570000 0 0 0 0 0 0 0 0 0 0 0 0 0 41483 2955 37081 345770 274188 274188 1 QFQGHTDGASCIDISHDGTK Unmodified 2172.9494 0.94944435 2104 Q04726 TLE3 Transducin-like enhancer protein 3 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 37.883 38.038 4 0.045677 41160 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 20.256 17.782 61937000 0 0 0 3185900 3789600 5044000 5872400 6966700 3751900 5478400 0 6889800 7120400 4180100 9658100 41484 2104 37082 345771;345772;345773;345774;345775;345776;345777;345778;345779;345780;345781 274189 274189 1 QFQLYEEPDTK Unmodified 1396.6511 0.65106071 372 O43823 AKAP8 A-kinase anchor protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 59.273 58.91 2 4.9172E-09 74808 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.91 117.88 201170000 0 51111000 0 0 10561000 15657000 0 10885000 10299000 15375000 21959000 15629000 19639000 12249000 17805000 41485 372 37083 345782;345783;345784;345785;345786;345787;345788;345789;345790;345791;345792 274190;274191;274192;274193;274194;274195;274196;274197;274198;274199;274200;274201;274202 274192 12 QFQQGAAGNMK Unmodified 1178.5502 0.55024123 1826 P61011 SRP54 Signal recognition particle 54 kDa protein yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 19.914 20.149 2 1.6919E-05 20644 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 127.02 110.48 99204000 0 0 0 0 6687800 7069600 8628600 10822000 4501400 8981800 14275000 12870000 8680400 6661200 10027000 41486 1826 37084 345793;345794;345795;345796;345797;345798;345799;345800;345801;345802;345803 274203;274204;274205;274206;274207 274203 3 QFQQGAAGNMK Oxidation (M) 1194.5452 0.54515585 1826 P61011 SRP54 Signal recognition particle 54 kDa protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 9.587 9.7169 2 1.2988E-05 6773 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 128.61 119.02 50916000 0 0 0 4126200 2788900 2882000 6350800 4155400 2826900 0 7929600 9079100 3488700 2774100 4513900 41487 1826 37084 345804;345805;345806;345807;345808;345809;345810;345811;345812;345813;345814 274208;274209;274210;274211;274212;274213 274210 2967 5 QFQSAPATVR Unmodified 1103.5724 0.57235688 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 30.077 30.142 2 0.0052248 32652 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 69.812 31.006 37508000 0 0 0 0 4913800 5040500 6498300 0 4085600 9200400 7768900 0 0 0 0 41488 5216 37085 345815;345816;345817;345818;345819;345820;345821;345822;345823 274214;274215;274216;274217;274218;274219 274214 6 QFRTEMEDLMSSK 2 Oxidation (M) 1632.7124 0.71235712 1356 P35579 MYH9 Myosin-9 yes yes 0 2 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching 9.58 1.79 1 18 1 2 2 2 2 1 2 2 1 3 1 28.019 27.984 2;3 0.001141 29878 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 58.32 33.599 306090000 0 0 12057000 43125000 43537000 44026000 35513000 2992800 34916000 7873400 7728100 63872000 0 0 10450000 41489 1356 37086 345824;345825;345826;345827;345828;345829;345830;345831;345832;345833;345834;345835;345836;345837;345838;345839;345840;345841;345842 274220;274221;274222;274223;274224;274225;274226;274227;274228 274222 2090;2091 6 QFRTEMEDLMSSK Oxidation (M) 1616.7174 0.71744249 1356 P35579 MYH9 Myosin-9 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 4 28 3 1 1 2 2 2 4 2 2 3 2 1 4 3 45.354 44.686 3 1.5613E-08 66232 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 108.59 99.772 523070000 89072000 0 3235300 18437000 22153000 30811000 29478000 40662000 25482000 48187000 55926000 60753000 7178900 41253000 50440000 41490 1356 37086 345843;345844;345845;345846;345847;345848;345849;345850;345851;345852;345853;345854;345855;345856;345857;345858;345859;345860;345861;345862;345863;345864;345865;345866;345867;345868;345869;345870;345871;345872;345873;345874 274229;274230;274231;274232;274233;274234;274235;274236;274237;274238;274239;274240;274241 274237 2090;2091 11 QFRTEMEDLMSSK Unmodified 1600.7225 0.72252787 1356 P35579 MYH9 Myosin-9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.53 1.88 1 16 1 1 2 1 2 2 2 1 1 1 1 2 66.948 66.627 2;3 3.3081E-07 75374 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.08 68.537 229180000 40790000 0 0 0 2105500 32228000 3573600 15109000 15359000 16364000 10931000 13299000 12512000 6546100 60360000 41491 1356 37086 345875;345876;345877;345878;345879;345880;345881;345882;345883;345884;345885;345886;345887;345888;345889;345890;345891 274242;274243;274244;274245;274246;274247;274248;274249 274244 7 QFRTEMEDLMSSKDDVGK 2 Oxidation (M) 2146.9511 0.95108384 1356 P35579 MYH9 Myosin-9 yes yes 0 2 2 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 2 2 1 1 1 2 2 1 1 33.376 33.63 3 3.0027E-06 37288 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 69.979 65.007 131540000 0 0 0 0 5977200 9902000 20862000 3952900 3918400 6794500 22330000 43151000 8155400 0 6497000 41492 1356 37087 345892;345893;345894;345895;345896;345897;345898;345899;345900;345901;345902;345903;345904;345905 274250;274251;274252;274253;274254;274255;274256;274257;274258;274259 274259 2090;2091 5 QFSANDK Unmodified 808.37153 0.37153181 1380 P36871 PGM1 Phosphoglucomutase-1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 8.0801 5.3427 2 0.023949 7728 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.04 61.647 859180000 0 854570000 4612900 0 0 0 0 0 0 0 0 0 0 0 0 41493 1380 37088 345906;345907 274260 274260 1 QFSDASQLDFVK Unmodified 1383.667 0.66704513 3521 Q8TEW0 PARD3 Partitioning defective 3 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 8 3.46 1 3 1 1 1 1 73.655 72.587 2 0.0036149 90330 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.24 54.135 42195000 0 25717000 0 0 0 0 4010000 0 0 0 0 7129200 5338400 0 0 41494 3521 37089 345908;345909;345910;345911 274261;274262 274261 2 QFSFPLSSEPFQGSYK Unmodified 1847.873 0.87301516 740 P01023 A2M Alpha-2-macroglobulin yes yes 0 0 0 By MS/MS 10 0 1 1 86.439 86.635 2 0.00031369 100405 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 67.153 61.547 2552900 0 0 0 0 0 0 0 2552900 0 0 0 0 0 0 0 41495 740 37090 345912 274263 274263 1 QFSMFLGK Unmodified 956.47897 0.47897377 1120 P21266 GSTM3 Glutathione S-transferase Mu 3 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 74.48 74.499 2 0.026676 86630 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 57.811 36.827 66329000 0 0 0 1460000 2610400 2604500 0 0 0 5613600 9736000 8475300 0 6012100 29817000 41496 1120 37091 345913;345914;345915;345916;345917;345918;345919;345920 274264;274265 274265 2 QFSQILK Unmodified 862.49125 0.49125301 2101 Q04446 GBE1 1,4-alpha-glucan-branching enzyme yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 54.507 48.538 2 0.019046 63236 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.72 40.282 276160000 187380000 72413000 16362000 0 0 0 0 0 0 0 0 0 0 0 0 41497 2101 37092 345921;345922;345923 274266;274267;274268;274269 274267 4 QFSQYIK Unmodified 912.47052 0.47051757 1508 P46777 RPL5 60S ribosomal protein L5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43.748 42.729 2 0.019598 58480 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 114.02 77.436 1528700000 374160000 214190000 17675000 65411000 64842000 57369000 55051000 59339000 52239000 81704000 100670000 114260000 94590000 84443000 92806000 41498 1508 37093 345924;345925;345926;345927;345928;345929;345930;345931;345932;345933;345934;345935;345936;345937;345938 274270;274271;274272;274273;274274;274275;274276;274277;274278;274279;274280;274281;274282;274283 274275 8 QFSSASSQQGQEEK Unmodified 1539.6801 0.68012901 4593 Q9NR50 EIF2B3 Translation initiation factor eIF-2B subunit gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.063 12.211 2 0.00038112 11377 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 73.632 69.478 36385000 0 0 0 1356700 1182400 8459600 1580400 1392000 3061600 3405900 2167700 3648800 2325500 2175100 5629200 41499 4593 37094 345939;345940;345941;345942;345943;345944;345945;345946;345947;345948;345949;345950 274284;274285;274286;274287;274288;274289;274290;274291;274292 274284 9 QFSSASSQQGQEEKEEDLK Unmodified 2153.9713 0.97128523 4593 Q9NR50 EIF2B3 Translation initiation factor eIF-2B subunit gamma yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 27.886 27.585 3 6.0697E-05 35101 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 56.149 47.217 86601000 0 18909000 0 8163300 3998200 0 7842500 5301600 0 0 9416100 9675800 12833000 0 10461000 41500 4593 37095 345951;345952;345953;345954;345955;345956;345957;345958;345959 274293;274294;274295;274296;274297;274298;274299;274300 274295 8 QFSSSYLSR Unmodified 1073.5142 0.5141733 1354 P35527;CON__P35527 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.646 43.821 2 0.0032246 48829 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 132.76 98.961 + 4891300000 0 0 0 280980000 185100000 129230000 127310000 2881700000 122510000 271070000 294110000 128850000 313000000 92383000 65056000 41501 1354 37096 345960;345961;345962;345963;345964;345965;345966;345967;345968;345969;345970;345971 274301;274302;274303;274304;274305;274306;274307;274308;274309;274310;274311;274312;274313;274314;274315 274309 15 QFSTASDHEQPGVSG Unmodified 1545.6696 0.66956432 2843 Q66K14 TBC1D9B TBC1 domain family member 9B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 30.767 31.06 2 7.6699E-05 33450 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 74.533 61.722 54130000 0 0 0 6931900 0 6096200 0 0 0 4181300 9226300 9297300 5915100 3897800 8584400 41502 2843 37097 345972;345973;345974;345975;345976;345977;345978;345979 274316;274317;274318;274319;274320;274321 274320 6 QFTSSSSIK Unmodified 983.49238 0.49237523 84 CON__Q04695;Q04695 KRT17 Keratin, type I cytoskeletal 17 no no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.166 21.37 2 0.0031256 21949 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 91.069 68.049 + 394710000 0 0 0 76769000 20525000 14920000 21622000 28617000 9847000 22781000 20978000 23707000 127570000 13459000 13916000 41503 84 37098 345980;345981;345982;345983;345984;345985;345986;345987;345988;345989;345990;345991 274322;274323;274324;274325;274326;274327;274328;274329;274330;274331 274330 10 QFTSSSSMK Unmodified 1001.4488 0.44879585 56;70 CON__P02533;P02533;CON__P08779;P08779;CON__Q9Z2K1;CON__Q3ZAW8 KRT14;KRT16 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.57 15.713 2 0.0039854 15387 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 97.635 72.961 + 1381100000 0 0 0 233730000 48183000 38551000 33373000 192510000 27182000 99360000 91193000 0 509140000 60035000 47806000 41504 56;70 37099 345992;345993;345994;345995;345996;345997;345998;345999;346000;346001;346002;346003 274332;274333;274334;274335;274336;274337;274338;274339;274340;274341;274342;274343 274342 8 QFTSSSSMK Oxidation (M) 1017.4437 0.44371047 56;70 CON__P02533;P02533;CON__P08779;P08779;CON__Q9Z2K1;CON__Q3ZAW8 KRT14;KRT16 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16 no no 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 6.8576 6.9947 2 0.002275 5026 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 94.309 81.321 + 534170000 0 0 0 84618000 22286000 0 22782000 71747000 15987000 39409000 41160000 30261000 177520000 17675000 10728000 41505 56;70 37099 346004;346005;346006;346007;346008;346009;346010;346011;346012;346013;346014 274344;274345;274346;274347;274348;274349;274350;274351;274352;274353 274351 60 6 QFTYYPLVEDK Unmodified 1401.6816 0.68163256 2042 Q00653 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76.764 76.29 2 0.00043172 87267 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 101.38 83.945 192390000 0 94547000 2664500 3008500 3564800 10754000 6194100 7565700 5861600 8589500 9682700 10686000 6236200 8341800 14693000 41506 2042 37100 346015;346016;346017;346018;346019;346020;346021;346022;346023;346024;346025;346026;346027;346028 274354;274355;274356;274357;274358;274359;274360;274361;274362;274363;274364;274365;274366;274367 274363 14 QFVDGPPGPVK Unmodified 1139.5975 0.597509 4329 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.257 49.414 2 0.00027936 55288 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 111.46 72.493 302850000 0 0 0 18788000 22771000 35996000 28943000 0 23647000 27336000 31755000 34056000 24625000 19924000 35009000 41507 4329 37101 346029;346030;346031;346032;346033;346034;346035;346036;346037;346038;346039;346040 274368;274369;274370;274371;274372;274373;274374;274375;274376;274377;274378;274379;274380;274381 274380 13 QFVFDLHSGK Unmodified 1176.5928 0.59275797 4123 Q9BS26 ERP44 Endoplasmic reticulum resident protein 44 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.723 63.816 3 0.045187 72039 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 34.773 24.543 58077000 0 0 0 3176000 2252300 5430200 3026000 3230600 3437400 4789100 4856400 7074300 3611600 6268500 10924000 41508 4123 37102 346041;346042;346043;346044;346045;346046;346047;346048;346049;346050;346051;346052 274382 274382 1 QFVPGDEPR Unmodified 1043.5036 0.50360861 888 P09543 CNP 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 35.269 35.427 2 0.016214 39194 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 56.729 35.575 80666000 0 0 0 5819500 5410400 7825600 7001500 6305000 0 9709100 0 9474200 9839700 9384900 9895900 41509 888 37103 346053;346054;346055;346056;346057;346058;346059;346060;346061;346062;346063 274383;274384;274385;274386;274387;274388;274389 274388 7 QFVPGDEPREK Unmodified 1300.6412 0.64116473 888 P09543 CNP 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes yes 0 0 1 By matching By MS/MS By MS/MS 10 0 3 1 1 1 27.457 28.075 3 0.039907 29284 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.982 28.237 62951000 0 0 0 0 0 0 0 0 0 0 26486000 18507000 0 0 17959000 41510 888 37104 346064;346065;346066 274390 274390 0 QFVTATDVVR Unmodified 1134.6033 0.60332266 985 P13796 LCP1 Plastin-2 yes yes 0 0 0 By MS/MS 10 0 1 1 55.873 55.21 2 0.024054 63464 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 45.161 14.976 6616200 0 0 0 6616200 0 0 0 0 0 0 0 0 0 0 0 41511 985 37105 346067 274391 274391 1 QFVTPADVVSGNPK Unmodified 1457.7514 0.75144346 986;2421 P13797;Q14651 PLS3;PLS1 Plastin-3;Plastin-1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 66.99 66.628 2 7.4181E-19 76264 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 126.19 112.84 771840000 0 93686000 0 35366000 24574000 67103000 44131000 31360000 23972000 55171000 88356000 76308000 35802000 57831000 138180000 41512 986;2421 37106 346068;346069;346070;346071;346072;346073;346074;346075;346076;346077;346078;346079;346080 274392;274393;274394;274395;274396;274397;274398;274399;274400;274401;274402;274403;274404;274405;274406 274393 15 QFYEPKPDLLPPLK Unmodified 1683.9236 0.92359416 4669 Q9NVI1 FANCI Fanconi anemia group I protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 80.928 80.14 3 0.0079121 102733 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 39.509 33.102 106860000 15157000 0 0 0 0 10739000 7860600 0 10517000 10629000 0 15675000 6881600 8793000 20607000 41513 4669 37107 346081;346082;346083;346084;346085;346086;346087;346088;346089 274407;274408;274409;274410;274411 274410 5 QFYINVER Unmodified 1067.54 0.53999412 1816;2396 P60842;Q14240 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed no no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 61.584 61.836 2 0.02509 70361 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 58.981 39.277 78877000 0 0 0 0 0 14051000 5987800 5780300 3303800 0 11142000 7959800 5614800 7582900 17455000 41514 1816;2396 37108 346090;346091;346092;346093;346094;346095;346096;346097;346098 274412 274412 1 QFYINVEREEWK Unmodified 1639.7995 0.79945628 1816;2396 P60842;Q14240 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed no no 0 0 1 By matching By MS/MS 10 0 2 1 1 72.823 73 3 0.027266 83502 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 34.768 23.824 18918000 0 0 0 0 0 6336800 0 0 0 0 0 0 0 0 12581000 41515 1816;2396 37109 346099;346100 274413 274413 1 QFYPDLIR Unmodified 1050.5498 0.54983053 2256 Q13228 SELENBP1 Selenium-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 74.353 74.636 2 0.040448 85611 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.212 55.639 49844000 0 0 0 0 0 0 0 0 0 0 13794000 0 0 0 36050000 41516 2256 37110 346101;346102 274414;274415 274414 1 QGAENMIQMYSNGSSK Unmodified 1743.7556 0.75561891 2604 Q16513 PKN2 Serine/threonine-protein kinase N2 yes yes 0 0 0 By MS/MS 2 0 1 1 65.941 60.023 2 4.1915E-45 76815 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 155.02 120.32 13181000 0 13181000 0 0 0 0 0 0 0 0 0 0 0 0 0 41517 2604 37111 346103 274416 274416 1 QGAENMTHTCASGTPK Unmodified 1688.7247 0.72465314 2938 Q6P5Z2 PKN3 Serine/threonine-protein kinase N3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.568 15.738 3 0.034287 15502 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 26.729 20.148 58878000 0 0 0 3119500 2480200 2836300 3092900 5117000 2750000 3892800 5466200 8727000 7413100 4848300 9134200 41518 2938 37112 346104;346105;346106;346107;346108;346109;346110;346111;346112;346113;346114;346115 274417;274418;274419 274419 3 QGAFLVNTAR Unmodified 1075.5774 0.57744226 2276 Q13363 CTBP1 C-terminal-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 2 1 1 1 1 1 48.336 48.497 2 0.0072907 54409 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 62.823 32.211 107060000 0 0 0 5892100 4286900 9127300 5410300 7506500 3707000 10565000 12041000 11879000 7733600 8178800 20728000 41519 2276 37113 346116;346117;346118;346119;346120;346121;346122;346123;346124;346125;346126;346127;346128 274420;274421;274422;274423;274424;274425;274426;274427;274428;274429 274424 10 QGAIVAVTGDGVNDSPALK Unmodified 1810.9425 0.94249171 792 P05023;P13637;P50993 ATP1A1;ATP1A3;ATP1A2 Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-3;Sodium/potassium-transporting ATPase subunit alpha-2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.091 68.17 2 7.2321E-50 78097 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 139.89 125.65 68747000 0 0 0 4300000 4244300 4300400 5618300 4787200 3908800 5433400 6611700 8354500 6871200 6301500 8015900 41520 792 37114 346129;346130;346131;346132;346133;346134;346135;346136;346137;346138;346139;346140 274430;274431;274432;274433;274434;274435;274436;274437;274438;274439;274440;274441;274442;274443 274441 14 QGANINEIR Unmodified 1013.5254 0.52540669 2520 Q15365 PCBP1 Poly(rC)-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.242 29.433 2 0.005128 31591 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 82.75 52.138 4128500000 0 0 0 265960000 179390000 348180000 346700000 258620000 159630000 405850000 333530000 429140000 392320000 290490000 718680000 41521 2520 37115 346141;346142;346143;346144;346145;346146;346147;346148;346149;346150;346151;346152 274444;274445;274446;274447;274448;274449;274450;274451;274452;274453;274454;274455;274456 274448 13 QGAPTSFLPPEASQLKPDR Unmodified 2038.0484 0.048353761 4162 Q9BUJ2 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.599 75.658 3 6.6935E-12 87276 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 87.49 81.368 559840000 0 0 0 24150000 33494000 45834000 37982000 39633000 37620000 58488000 58947000 63911000 38125000 48740000 72914000 41522 4162 37116 346153;346154;346155;346156;346157;346158;346159;346160;346161;346162;346163;346164 274457;274458;274459;274460;274461;274462;274463;274464;274465;274466;274467;274468;274469;274470;274471;274472 274459 16 QGAPTSFLPPEASQLKPDRQQFQSR Unmodified 2812.4256 0.42563965 4162 Q9BUJ2 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes yes 0 0 2 By MS/MS 10 0 1 1 74.575 74.914 4 0.00041774 85902 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.491 28.845 10102000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10102000 41523 4162 37117 346165 274473 274473 1 QGCDCECLGGGRISHQSQDK Unmodified 2290.9477 0.94774657 4613 Q9NRX4 PHPT1 14 kDa phosphohistidine phosphatase yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 26.898 22.635 4 0.00034267 32109 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.524 49.663 17648000 10970000 0 6677700 0 0 0 0 0 0 0 0 0 0 0 0 41524 4613 37118 346166;346167 274474;274475 274475 2 QGCQRENETLIQR Unmodified 1630.7846 0.78455128 2916 Q6P1J9 CDC73 Parafibromin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 24.515 24.702 3 4.9764E-06 25961 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 82.774 53.447 75346000 0 0 0 0 8607800 0 0 10989000 9980700 0 11710000 0 20037000 14022000 0 41525 2916 37119 346168;346169;346170;346171;346172;346173;346174 274476;274477;274478;274479;274480;274481;274482;274483 274481 8 QGDFESDHSGYVRPVPVPR Unmodified 2141.029 0.029015303 28 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 0 0 1 By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.45 55.58 4 0.0067938 62951 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 32.156 26.702 106660000 0 0 0 4351100 2411800 13248000 6477300 5113500 7004800 9402000 9588800 9817500 5251500 7669400 26322000 41526 28 37120 346175;346176;346177;346178;346179;346180;346181;346182;346183;346184;346185;346186 274484;274485;274486;274487;274488;274489 274486 6 QGDIHELK Unmodified 938.48214 0.48214489 106 Q9C075;CON__Q9C075 KRT23 Keratin, type I cytoskeletal 23 yes no 0 0 0 By MS/MS By matching 10 0 2 1 1 13.952 13.793 2 0.036158 13245 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 87.181 51.688 + 9283500 0 0 0 7430600 1852800 0 0 0 0 0 0 0 0 0 0 41527 106 37121 346187;346188 274490 274490 0 QGDITEDETIRFK Unmodified 1550.7577 0.75765105 3168 Q86VN1 VPS36 Vacuolar protein-sorting-associated protein 36 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 51.99 52.273 3 0.023617 57974 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.424 17.398 22468000 0 0 0 0 0 6089200 0 0 0 4524300 0 0 0 3930300 7923900 41528 3168 37122 346189;346190;346191;346192 274491 274491 1 QGDTGDWIGTFLGHK Unmodified 1630.774 0.77396981 5167 Q9Y3F4 STRAP Serine-threonine kinase receptor-associated protein yes yes 0 0 0 By MS/MS 10 0 1 1 85.395 85.564 3 0.01314 98799 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.702 25.821 11172000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11172000 41529 5167 37123 346193 274492 274492 1 QGECLNFGIK Unmodified 1164.5597 0.55974328 464 O75152 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 61.882 62.133 2 0.001548 70635 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 93.143 80.166 23500000 0 0 0 0 0 3509400 0 0 3945000 0 6269800 9776200 0 0 0 41530 464 37124 346194;346195;346196;346197;346198 274493;274494;274495;274496;274497 274497 5 QGEDNSTAQDTEELEK Unmodified 1792.7599 0.75989547 3147 Q86UE4 MTDH Protein LYRIC yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 28.573 28.405 2 0.0013951 30849 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 66.498 60.496 8764900 0 0 0 3874700 2405600 0 0 2484600 0 0 0 0 0 0 0 41531 3147 37125 346199;346200;346201 274498 274498 1 QGEEEDAEIIVK Unmodified 1358.6565 0.65654002 4912 Q9UHX1 PUF60 Poly(U)-binding-splicing factor PUF60 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.47 2 1 14 1 1 2 1 2 1 1 1 1 1 1 1 1 49.117 48.64 2 3.0672E-08 53815 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 130.41 108.96 547090000 10722000 0 0 20711000 33267000 26855000 31806000 30408000 36975000 48547000 48049000 51374000 48933000 64636000 94812000 41532 4912 37126 346202;346203;346204;346205;346206;346207;346208;346209;346210;346211;346212;346213;346214;346215;346216 274499;274500;274501;274502;274503;274504;274505;274506;274507;274508;274509;274510;274511;274512;274513;274514;274515;274516;274517 274510 19 QGEEPLVR Unmodified 926.48214 0.48214489 464 O75152;A0A1B0GTU1 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 24.774 24.935 2 0.012605 26368 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 74.255 58.757 154520000 0 0 0 12667000 10300000 12039000 13146000 11265000 10922000 14054000 13969000 25271000 17533000 13351000 0 41533 464 37127 346217;346218;346219;346220;346221;346222;346223;346224;346225;346226;346227 274518;274519;274520;274521;274522;274523;274524 274520 7 QGEEVFQSLSK Unmodified 1250.6143 0.61428128 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 53.782 54.105 2 0.039356 61274 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 46.796 30.02 47301000 0 0 0 0 0 5079300 0 0 3379100 6706800 6581400 7254400 7240200 4888500 6171300 41534 3641 37128 346228;346229;346230;346231;346232;346233;346234;346235 274525 274525 1 QGEGSSGVSSLLLHPEPVPGPEK Unmodified 2300.1648 0.16484008 464 O75152 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 78.378 77.721 3 7.2266E-29 89961 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 98.121 90.167 425760000 0 47960000 1755500 16672000 19642000 25650000 24572000 28068000 28834000 35030000 38452000 47528000 35230000 31802000 44568000 41535 464 37129 346236;346237;346238;346239;346240;346241;346242;346243;346244;346245;346246;346247;346248;346249;346250 274526;274527;274528;274529;274530;274531;274532;274533;274534;274535;274536;274537;274538;274539;274540;274541;274542;274543;274544 274542 19 QGEMREMQQLSGGQK Unmodified 1705.7876 0.78758774 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 41.995 37.617 3 0.003866 47400 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 82.102 82.102 25162000 0 9539200 15622000 0 0 0 0 0 0 0 0 0 0 0 0 41536 5071 37130 346251;346252 274545 274545 0 QGETLNFLEIGYSR Unmodified 1625.8049 0.80493559 2617 Q16610 ECM1 Extracellular matrix protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 86.478 86.501 2 0.00086024 100129 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 75.695 66.741 14394000 0 0 0 2626600 0 1930400 0 3716200 0 2856300 0 3264500 0 0 0 41537 2617 37131 346253;346254;346255;346256;346257 274546;274547;274548;274549;274550 274548 5 QGETPGASSDLNRLDK Unmodified 1686.8173 0.81729119 1187 P25391 LAMA1 Laminin subunit alpha-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.317 37.497 3 0.0016194 40909 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 33.313 7.3309 78616000 0 0 0 3485900 4857900 6828700 4036400 4315600 4986700 8046900 7340600 12130000 9517300 4838500 8230500 41538 1187 37132 346258;346259;346260;346261;346262;346263;346264;346265;346266;346267;346268;346269 274551;274552;274553;274554;274555;274556;274557 274557 7 QGETVADVR Unmodified 973.48287 0.48287317 1418 P40692 MLH1 DNA mismatch repair protein Mlh1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 19.582 19.948 2 0.0080246 19141 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.816 16.04 98601000 0 0 0 0 0 17029000 0 13438000 0 0 16757000 14935000 16740000 0 19702000 41539 1418 37133 346270;346271;346272;346273;346274;346275 274558;274559;274560;274561;274562;274563 274559 6 QGEVIVSIEEK Unmodified 1229.6503 0.65033243 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 0 0 By MS/MS 2 0 1 1 62.12 56.245 2 0.044432 72536 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 63.694 36.564 23554000 0 23554000 0 0 0 0 0 0 0 0 0 0 0 0 0 41540 1564 37134 346276 274564 274564 0 QGFGNLPICMAK Oxidation (M) 1350.6424 0.64242706 953 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS 8.08 3.33 2 1 9 1 2 1 1 1 1 1 1 1 1 1 70.222 68.83 2 0.0076159 78687 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 45.161 35.208 181080000 51299000 68862000 0 5703200 5251800 5889200 6732200 0 5664600 0 0 10039000 5462600 9280900 6898100 41541 953 37135 346277;346278;346279;346280;346281;346282;346283;346284;346285;346286;346287;346288 274565;274566;274567;274568;274569 274568 1234 5 QGFGNLPICMAK Unmodified 1334.6475 0.64751243 953 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS 10 0 1 1 78.661 78.907 2 2.4981E-05 90759 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.178 75.742 31162000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31162000 41542 953 37135 346289 274570 274570 1 QGFGNVATNTDGK Unmodified 1307.6106 0.61059288 758 P02675 FGB Fibrinogen beta chain;Fibrinopeptide B;Fibrinogen beta chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 4 1 2 1 31.341 31.413 2 3.4266E-05 34492 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 89.403 72.732 23119000 0 0 0 6568200 0 0 0 13971000 0 0 0 0 2580300 0 0 41543 758 37136 346290;346291;346292;346293 274571;274572;274573 274572 3 QGFNNQPAVSGDEHGSAK Unmodified 1841.8293 0.82925286 3709 Q93074 MED12 Mediator of RNA polymerase II transcription subunit 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 9.42 1.93 1 11 1 1 1 1 1 1 1 1 1 1 1 1 24.274 24.063 3 0.00036724 25928 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 52.52 36.092 42197000 0 3423900 0 0 2951300 2914300 3162300 3265100 2315800 4965700 3931300 0 2949600 3538300 8779400 41544 3709 37137 346294;346295;346296;346297;346298;346299;346300;346301;346302;346303;346304;346305 274574;274575;274576;274577;274578;274579;274580;274581;274582;274583;274584 274584 11 QGFPNRVVFQEFR Unmodified 1622.8318 0.83175947 1356 P35579 MYH9 Myosin-9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.845 75.907 3 2.3778E-09 87104 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 95.631 85.559 321480000 0 0 0 6259000 5092200 44068000 10402000 27003000 34253000 28337000 14169000 45067000 17223000 16358000 73252000 41545 1356 37138 346306;346307;346308;346309;346310;346311;346312;346313;346314;346315;346316;346317 274585;274586;274587;274588;274589;274590;274591;274592;274593;274594;274595;274596;274597;274598;274599 274591 15 QGFVPAAYVK Unmodified 1078.5811 0.58113065 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 63.117 63.283 2 0.0080794 71483 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 60.91 44.355 95373000 0 0 0 0 4695000 10681000 6205800 0 4240200 11922000 15313000 11695000 6337100 8192000 16093000 41546 2344 37139 346318;346319;346320;346321;346322;346323;346324;346325;346326;346327 274600;274601;274602;274603;274604;274605;274606;274607;274608;274609 274607 10 QGGDVLQNEEGETTSHLMGMFYR 2 Oxidation (M) 2630.1377 0.13771541 1405 P39748 FEN1 Flap endonuclease 1 yes yes 0 2 0 By matching By matching By MS/MS 10 0 3 1 1 1 71.575 71.855 3 2.2552E-06 81765 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.833 43.735 22488000 0 0 0 0 0 0 0 3092500 0 0 5039800 0 0 0 14356000 41547 1405 37140 346328;346329;346330 274610 274610 2191;2192 0 QGGESETFAK Unmodified 1052.4775 0.47745344 2298 Q13485 SMAD4 Mothers against decapentaplegic homolog 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 15.077 15.294 2 0.0023379 14063 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.615 62.484 26118000 0 0 0 0 0 2996100 3089500 0 0 4312100 0 4681600 0 5081900 5957300 41548 2298 37141 346331;346332;346333;346334;346335;346336 274611;274612;274613 274613 3 QGGGGGGGSVPGIER Unmodified 1283.6218 0.62182627 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.817 31.007 2 4.7683E-24 33790 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 124.47 112.62 1334500000 0 0 0 70161000 81219000 100980000 109080000 90907000 84960000 106900000 126860000 181060000 137450000 120380000 124500000 41549 1681 37142 346337;346338;346339;346340;346341;346342;346343;346344;346345;346346;346347;346348 274614;274615;274616;274617;274618;274619;274620;274621;274622;274623;274624;274625;274626 274616 13 QGGITSDQAAVISK Unmodified 1373.7151 0.71505795 3356 Q8N668 COMMD1 COMM domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.086 41.268 2 0.0019414 45955 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 71.153 52.373 81877000 0 0 0 4426700 5574800 9931500 8056100 8195700 0 8112100 7797200 10261000 4466800 5720000 9335900 41550 3356 37143 346349;346350;346351;346352;346353;346354;346355;346356;346357;346358;346359;346360 274627;274628;274629;274630;274631;274632;274633;274634;274635;274636 274628 10 QGGLGPMNIPLVSDPK Oxidation (M) 1637.8447 0.84469192 2131 Q06830 PRDX1 Peroxiredoxin-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.08 3.94 1 15 4 20 5 11 4 2 2 2 1 1 2 2 2 1 2 1 2 79.17 77.676 2;3 3.5481E-23 95283 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.46 111.71 13974000000 175220000 11291000000 158340000 201170000 112110000 155600000 71632000 51969000 102360000 199360000 414590000 203620000 97291000 148170000 591270000 41551 2131 37144 346361;346362;346363;346364;346365;346366;346367;346368;346369;346370;346371;346372;346373;346374;346375;346376;346377;346378;346379;346380;346381;346382;346383;346384;346385;346386;346387;346388;346389;346390;346391;346392;346393;346394;346395;346396;346397;346398;346399;346400 274637;274638;274639;274640;274641;274642;274643;274644;274645;274646;274647;274648;274649;274650;274651;274652;274653;274654;274655;274656;274657;274658;274659;274660;274661;274662;274663;274664;274665;274666;274667;274668;274669;274670;274671 274644 3434 33 QGGLGPMNIPLVSDPK Unmodified 1621.8498 0.84977729 2131 Q06830 PRDX1 Peroxiredoxin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.62 1 6 1 20 1 5 2 2 1 2 2 1 1 1 3 2 1 2 2 87.863 87.109 2;3 4.9088E-19 102431 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 130.1 97.493 17864000000 20673000 15764000000 82458000 78349000 43823000 96669000 58577000 90598000 51982000 115860000 284240000 206860000 36016000 179260000 754520000 41552 2131 37144 346401;346402;346403;346404;346405;346406;346407;346408;346409;346410;346411;346412;346413;346414;346415;346416;346417;346418;346419;346420;346421;346422;346423;346424;346425;346426;346427;346428 274672;274673;274674;274675;274676;274677;274678;274679;274680;274681;274682;274683;274684;274685;274686;274687;274688;274689;274690;274691;274692;274693;274694;274695;274696;274697;274698 274691 23 QGGLGPMNIPLVSDPKR Oxidation (M) 1793.9458 0.94580295 2131 Q06830 PRDX1 Peroxiredoxin-1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 2 1 2 1 1 1 2 2 1 69.601 69.778 3 0.0013253 79925 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.489 49.545 140290000 0 0 0 0 0 14000000 6307400 13185000 0 7269800 19572000 25737000 12582000 21646000 19989000 41553 2131 37145 346429;346430;346431;346432;346433;346434;346435;346436;346437;346438;346439;346440;346441 274699;274700;274701 274699 3434 0 QGGPTYYIDTNALR Unmodified 1567.7631 0.76307078 716 O96019 ACTL6A Actin-like protein 6A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.282 72.353 2 9.7681E-14 83260 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 132.17 116.6 562030000 0 0 0 25840000 39258000 40594000 40015000 71772000 28524000 48053000 57918000 67262000 42525000 42556000 57714000 41554 716 37146 346442;346443;346444;346445;346446;346447;346448;346449;346450;346451;346452;346453 274702;274703;274704;274705;274706;274707;274708;274709;274710;274711;274712;274713 274703 12 QGGQGDGIQVNSQFQQEFPSLQAAGDQEK Unmodified 3090.4279 0.42788407 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 81.392 81.541 3 4.1767E-07 94399 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 36.533 30.692 16700000 0 0 0 0 0 0 0 0 0 7912700 4098400 4689300 0 0 0 41555 5216 37147 346454;346455;346456 274714 274714 1 QGGRGAGATLEHQQEISK Unmodified 1865.9344 0.93438664 5247 Q9Y5S2 CDC42BPB Serine/threonine-protein kinase MRCK beta yes yes 0 0 1 By MS/MS 2 0 2 2 27.434 22.045 3;4 1.725E-19 31345 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 113.88 82.055 179830000 179830000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41556 5247 37148 346457;346458 274715;274716;274717 274716 3 QGGSILLITGPPGCGK Unmodified 1553.8236 0.82356254 564 O75943 RAD17 Cell cycle checkpoint protein RAD17 yes yes 0 0 0 By MS/MS 2 0 1 1 82.928 74.797 2 0.0095803 97886 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.924 42.224 7494600 7494600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41557 564 37149 346459 274718 274718 1 QGGSQPSSFSPGQSQVTPQDQEK Unmodified 2403.0939 0.093859983 4333 Q9H0L4 CSTF2T Cleavage stimulation factor subunit 2 tau variant yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 42.971 42.771 3 0.0010597 48298 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 20.891 12.994 20547000 0 0 0 4204700 3385900 0 5974800 6981900 0 0 0 0 0 0 0 41558 4333 37150 346460;346461;346462;346463 274719;274720;274721 274721 2 QGGSQSSYVLQTEELVANK Unmodified 2037.0015 0.0014631481 781 P04279 SEMG1 Semenogelin-1;Alpha-inhibin-92;Alpha-inhibin-31;Seminal basic protein yes yes 0 0 0 By MS/MS 10 0 1 1 76.927 77.114 3 0.016176 88981 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 27.324 21.51 2952300 0 0 0 0 0 0 0 2952300 0 0 0 0 0 0 0 41559 781 37151 346464 274722;274723 274722 2 QGHSIVVSSLK Unmodified 1153.6455 0.64552182 299 O43156 TTI1 TELO2-interacting protein 1 homolog yes yes 0 0 0 By MS/MS By MS/MS By matching 2 0 4 2 1 1 42.977 38.293 2;3 1.1816E-06 52145 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 123.51 100.77 120420000 108760000 11616000 35938 0 0 0 0 0 0 0 0 0 0 0 0 41560 299 37152 346465;346466;346467;346468 274724;274725 274724 1 QGIETPEDQNDLRK Unmodified 1641.7958 0.79582747 2554 Q15637 SF1 Splicing factor 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.76 2.85 3 1 21 1 2 1 1 2 2 2 2 2 2 2 1 2 1 2 33.503 32.88 2;3 4.0894E-30 42072 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.7 109.28 921390000 31660000 237250000 8731700 29586000 34601000 36324000 52698000 35346000 26395000 54713000 76984000 62396000 47176000 56528000 130990000 41561 2554 37153 346469;346470;346471;346472;346473;346474;346475;346476;346477;346478;346479;346480;346481;346482;346483;346484;346485;346486;346487;346488;346489;346490;346491;346492;346493 274726;274727;274728;274729;274730;274731;274732;274733;274734;274735;274736;274737;274738;274739;274740;274741;274742;274743;274744;274745;274746;274747;274748;274749;274750 274731 24 QGIFPASYVQVSREPR Unmodified 1832.9533 0.95333116 406 O60504 SORBS3 Vinexin yes yes 0 0 1 By MS/MS 10 0 1 1 72.729 73.099 3 0.010548 83627 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 24.41 14.84 9493100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9493100 41562 406 37154 346494 274751 274751 1 QGIGHLLR Unmodified 892.52428 0.52428448 3301 Q8N0X7 SPG20 Spartin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 36.926 37.473 2 0.02755 40782 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.281 23.543 44464000 0 0 0 0 0 0 0 0 0 10955000 0 21088000 0 0 12421000 41563 3301 37155 346495;346496;346497 274752 274752 1 QGILGAQPQLIFQPHR Unmodified 1801.9951 0.9951364 3308 Q8N163 CCAR2 Cell cycle and apoptosis regulator protein 2 yes yes 0 0 0 By MS/MS By matching By matching By matching 10 0 4 1 1 1 1 81.867 81.967 3 0.011681 94818 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 27.208 20.479 11086000 0 0 0 0 0 3218200 0 0 0 1964500 0 0 781750 0 5121300 41564 3308 37156 346498;346499;346500;346501 274753 274753 1 QGIPFFGQVR Unmodified 1147.6138 0.61382777 740 P01023 A2M Alpha-2-macroglobulin yes yes 0 0 0 By matching By MS/MS By matching 10 0 3 1 1 1 82.519 82.48 2 0.040161 95286 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 40.002 24.851 9630300 0 0 0 812050 0 0 0 7526900 0 1291400 0 0 0 0 0 41565 740 37157 346502;346503;346504 274754 274754 1 QGIVTPIEAQTR Unmodified 1311.7147 0.71466402 2025 P98175 RBM10 RNA-binding protein 10 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 54.44 53.849 2 0.0065931 61839 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 84.17 31.38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41566 2025 37158 346505;346506 274755;274756 274755 2 QGLAITDEILLSK Unmodified 1399.7922 0.79224564 1644 P51003 PAPOLA Poly(A) polymerase alpha yes yes 0 0 0 By MS/MS 2 0 1 1 90.348 85.452 2 0.0021114 106127 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.353 76.361 56364000 0 56364000 0 0 0 0 0 0 0 0 0 0 0 0 0 41567 1644 37159 346507 274757 274757 1 QGLDPASQTK Unmodified 1043.5247 0.52473799 4321 Q9H0B6 KLC2 Kinesin light chain 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 19.03 19.181 2 0.0028846 19745 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 79.128 55.699 172710000 0 0 0 19644000 16653000 20454000 16392000 15761000 14379000 0 0 23241000 18713000 0 27477000 41568 4321 37160 346508;346509;346510;346511;346512;346513;346514;346515;346516 274758;274759;274760;274761;274762;274763;274764;274765 274758 4 QGLDSFDTGK Unmodified 1066.4931 0.49310351 2397 Q14241 TCEB3 Transcription elongation factor B polypeptide 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 39.958 39.727 2 0.016849 44335 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 49.3 34.15 159390000 0 28802000 0 9647800 7055200 10759000 11108000 7575100 6942200 13443000 12703000 16483000 11833000 8680200 14362000 41569 2397 37161 346517;346518;346519;346520;346521;346522;346523;346524;346525;346526;346527;346528;346529 274766;274767;274768;274769;274770;274771;274772;274773 274767 7 QGLEIESLK Unmodified 1015.555 0.55497548 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 17 1 1 1 2 2 1 2 2 1 1 2 1 58.823 58.962 2 0.009035 67456 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 67.897 34.347 81118000 0 0 0 3758000 1243700 4707700 7511200 6246700 4579400 8668900 11586000 6168300 6760500 7814000 12074000 41570 2446 37162 346530;346531;346532;346533;346534;346535;346536;346537;346538;346539;346540;346541;346542;346543;346544;346545;346546 274774;274775;274776 274775 3 QGLEQFINK Unmodified 1075.5662 0.56620887 404;5022 O60493;Q9UMY4 SNX3;SNX12 Sorting nexin-3;Sorting nexin-12 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 60.284 59.93 2 0.0030909 67199 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 127.56 38.269 492240000 0 183050000 0 16123000 13714000 34407000 24047000 20611000 16757000 35989000 30254000 31523000 24302000 21303000 40165000 41571 404;5022 37163 346547;346548;346549;346550;346551;346552;346553;346554;346555;346556;346557;346558;346559 274777;274778;274779;274780;274781;274782;274783;274784;274785;274786;274787;274788;274789 274782 13 QGLETFKPDYSEQK Unmodified 1668.7995 0.79951586 3091 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 49.028 49.084 3 0.042708 55504 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 30.867 20.67 121710000 0 0 0 0 14877000 16921000 16366000 10594000 20055000 19702000 0 0 23194000 0 0 41572 3091 37164 346560;346561;346562;346563;346564;346565;346566 274790 274790 1 QGLFPNNYVTK Unmodified 1279.6561 0.65608651 2215 Q12965 MYO1E Unconventional myosin-Ie yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68.143 67.06 2 0.0074144 75914 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.094 45.09 495920000 156170000 191000000 1452100 8657600 10850000 13496000 11407000 9037100 8163100 12351000 15644000 19869000 10310000 10560000 16954000 41573 2215 37165 346567;346568;346569;346570;346571;346572;346573;346574;346575;346576;346577;346578;346579;346580;346581 274791;274792;274793;274794;274795;274796;274797;274798 274793 4 QGLGPASTTSPSPGPR Unmodified 1508.7583 0.75831975 2023 P98171 ARHGAP4 Rho GTPase-activating protein 4 yes yes 0 0 0 By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 38.15 38.263 2 0.00087897 41291 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.956 35.105 21809000 0 0 0 1829700 1575600 3747400 1928600 0 1450600 4232400 0 3031500 0 0 4013200 41574 2023 37166 346582;346583;346584;346585;346586;346587;346588;346589 274799;274800;274801;274802 274801 2 QGLGPSGTSGAR Unmodified 1086.5418 0.54178503 5244 Q9Y5Q8 GTF3C5 General transcription factor 3C polypeptide 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.549 16.728 2 2.3589E-05 15110 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 91.549 68.23 149970000 0 0 0 9416700 8187200 12384000 10712000 7796400 5146100 13524000 14061000 17465000 14377000 16768000 20129000 41575 5244 37167 346590;346591;346592;346593;346594;346595;346596;346597;346598;346599;346600;346601 274803;274804;274805;274806;274807;274808;274809;274810;274811;274812;274813;274814;274815;274816;274817;274818 274813 16 QGLGPSGTSGARK Unmodified 1214.6367 0.63674805 5244 Q9Y5Q8 GTF3C5 General transcription factor 3C polypeptide 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 10.305 10.472 3 0.01427 8391 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.878 28.714 15500000 0 0 0 2287700 0 0 0 0 0 2651200 0 0 3488600 2893300 4178900 41576 5244 37168 346602;346603;346604;346605;346606 274819;274820;274821 274820 3 QGLIGVGLINVEDR Unmodified 1481.8202 0.82019173 17 A3KN83 SBNO1 Protein strawberry notch homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 84.886 85.032 2 0.00050602 98095 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 68.536 28.184 33020000 0 0 0 0 0 3983500 3732800 5175700 4183500 0 0 5579800 0 3620800 6743800 41577 17 37169 346607;346608;346609;346610;346611;346612;346613;346614;346615;346616 274822;274823;274824;274825;274826;274827;274828;274829;274830;274831;274832;274833 274827 12 QGLISAAQYYK Unmodified 1240.6452 0.64518747 3149 Q86UK7 ZNF598 Zinc finger protein 598 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 61.898 62.001 2 0.0014991 70075 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.325 57.065 92279000 0 0 0 6274500 6939900 0 7867000 8617200 0 11097000 7974600 11136000 10623000 6205900 15543000 41578 3149 37170 346617;346618;346619;346620;346621;346622;346623;346624;346625;346626 274834;274835;274836;274837;274838;274839;274840;274841 274835 7 QGLLPLTFADPADYNK Unmodified 1761.8938 0.8937506 4061 Q99798 ACO2 Aconitate hydratase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 93.595 91.253 2 0.0082391 105506 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.021 28.588 50115000 0 48469000 0 0 0 0 0 0 0 0 0 0 0 0 1645600 41579 4061 37171 346627;346628 274842;274843 274843 2 QGLLSEASVNNLMAK Unmodified 1573.8134 0.81339179 500 O75448 MED24 Mediator of RNA polymerase II transcription subunit 24 yes yes 0 0 0 By MS/MS 2 0 1 1 84.696 79.953 2 0.00022815 99426 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.152 58.799 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41580 500 37172 346629 274844 274844 1 QGLNGVPILSEEELSLLDEFYK Unmodified 2492.2686 0.26863645 2407 Q14444 CAPRIN1 Caprin-1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 102.22 98.269 2;3 1.5068E-15 120265 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.718 83.397 28745000 0 27245000 1500200 0 0 0 0 0 0 0 0 0 0 0 0 41581 2407 37173 346630;346631;346632 274845;274846 274845 2 QGLNNSPPVK Unmodified 1052.5615 0.56145784 1602 P49815 TSC2 Tuberin yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 30.387 25.888 2 0.038751 36435 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.531 4.8272 56170000 36381000 0 19789000 0 0 0 0 0 0 0 0 0 0 0 0 41582 1602 37174 346633;346634 274847 274847 1 QGLPTLQQDEFLQSGVQSK Unmodified 2102.0644 0.064397756 2973 Q6ULP2 AFTPH Aftiphilin yes yes 0 0 0 By MS/MS 2 0 1 1 83.902 79.182 3 0.0051269 98479 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 36.312 27.663 22785000 0 22785000 0 0 0 0 0 0 0 0 0 0 0 0 0 41583 2973 37175 346635 274848 274848 1 QGLQQTQQQQQTAALVR Unmodified 1925.0079 0.00788593 3709 Q93074;Q86YW9 MED12;MED12L Mediator of RNA polymerase II transcription subunit 12;Mediator of RNA polymerase II transcription subunit 12-like protein yes no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 2 2 45.238 45.592 2;3 0.039848 51824 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 37.426 31.819 42309000 0 0 0 0 3085300 2158800 0 0 4571900 5667400 0 15633000 0 0 11193000 41584 3709 37176 346636;346637;346638;346639;346640;346641;346642;346643 274849;274850 274850 2 QGLQTTQAHLER Unmodified 1380.711 0.71097563 2463 Q14C86 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 27.791 28.071 3 0.011555 30183 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 41.644 26.768 143100000 0 0 0 0 0 31132000 0 16503000 0 23330000 0 0 14162000 21261000 36707000 41585 2463 37177 346644;346645;346646;346647;346648;346649 274851;274852;274853 274852 3 QGLSSSIFTK Unmodified 1066.5659 0.56587452 1573 P49419 ALDH7A1 Alpha-aminoadipic semialdehyde dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 64.358 58.673 2 0.0028265 78836 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 100.25 73.108 560540000 324710000 219840000 15985000 0 0 0 0 0 0 0 0 0 0 0 0 41586 1573 37178 346650;346651;346652;346653 274854;274855;274856;274857;274858;274859;274860 274859 7 QGLYTPQTK Unmodified 1034.5397 0.53965977 214 O14777 NDC80 Kinetochore protein NDC80 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 32.635 28.101 2 0.032066 36425 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.474 35.307 18516000 0 18516000 0 0 0 0 0 0 0 0 0 0 0 0 0 41587 214 37179 346654 274861 274861 1 QGNFFASPMLK Unmodified 1238.6118 0.61177885 4329 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.136 77.197 2 0.00038093 88550 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.258 70.718 99588000 0 0 0 4768800 4911800 7247100 4670100 6404800 5002500 8571500 10061000 10252000 9548600 9056700 19094000 41588 4329 37180 346655;346656;346657;346658;346659;346660;346661;346662;346663;346664;346665;346666 274862;274863;274864;274865;274866;274867;274868;274869;274870 274865 9 QGNIVRELK Unmodified 1055.6087 0.60874239 1779 P56192 MARS Methionine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS 2 0 1 1 37.713 31.215 2 0.0052208 43464 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 176.6 92.106 181040000 181040000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41589 1779 37181 346667 274871 274871 0 QGNLSSQVPLK Unmodified 1169.6404 0.64043645 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 45.148 44.32 2 2.9308E-05 49868 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 118.67 94.15 1691700000 0 1041800000 3098200 56022000 41493000 66249000 35531000 38528000 36129000 54515000 52033000 68252000 52455000 53926000 91671000 41590 1986 37182 346668;346669;346670;346671;346672;346673;346674;346675;346676;346677;346678;346679;346680;346681;346682 274872;274873;274874;274875;274876;274877;274878;274879;274880;274881;274882;274883;274884;274885;274886;274887;274888;274889;274890;274891;274892;274893;274894;274895;274896;274897;274898 274893 26 QGNLSSQVPLKR Unmodified 1325.7415 0.74154747 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 36.31 36.493 3 0.025235 40843 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 29.544 14.004 137990000 0 0 0 13880000 10696000 5910200 12127000 0 4453300 12985000 11771000 24376000 13108000 13625000 15055000 41591 1986 37183 346683;346684;346685;346686;346687;346688;346689;346690;346691;346692;346693 274899;274900;274901;274902;274903 274902 2 QGNLSSSGNQEGSQK Unmodified 1519.6863 0.68627702 95 CON__Q5D862;Q5D862 FLG2 Filaggrin-2 yes no 0 0 0 By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.8631 6.9867 2 1.1196E-09 4952 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 118.28 110.05 + 95545000 0 0 0 20390000 5151800 5785900 5698000 18635000 4933100 7229000 6905600 6533000 8185600 3101500 2996300 41592 95 37184 346694;346695;346696;346697;346698;346699;346700;346701;346702;346703;346704;346705 274904;274905 274905 2 QGNLSSSGNQEGSQKR Unmodified 1675.7874 0.78738805 95 CON__Q5D862;Q5D862 FLG2 Filaggrin-2 yes no 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 6.2429 6.3235 3 4.2635E-05 4412 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.887 60.474 + 26734000 0 0 0 4449400 1512000 761020 1406200 7691400 508230 1848100 0 5920200 2037700 599740 0 41593 95 37185 346706;346707;346708;346709;346710;346711;346712;346713;346714;346715 274906;274907;274908 274908 3 QGNMTAALQAALK Oxidation (M) 1331.6867 0.68673471 289 O15511 ARPC5 Actin-related protein 2/3 complex subunit 5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 7 1 2 1 1 1 1 52.72 52.948 2 0.00063901 60010 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 67.207 49.976 103370000 0 0 0 8963800 0 0 0 0 0 15451000 0 34642000 16035000 0 28277000 41594 289 37186 346716;346717;346718;346719;346720;346721;346722 274909;274910;274911;274912 274909 373 4 QGNPVAPIK Unmodified 922.52362 0.52361577 2177 Q10471 GALNT2 Polypeptide N-acetylgalactosaminyltransferase 2;Polypeptide N-acetylgalactosaminyltransferase 2 soluble form yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 28.193 28.49 2 0.005209 30326 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 80.229 63.302 79001000 0 0 0 0 6341100 0 0 12342000 0 13943000 16489000 14597000 0 0 15288000 41595 2177 37187 346723;346724;346725;346726;346727;346728 274913;274914;274915;274916;274917 274914 5 QGNVLPLWGNEK Unmodified 1353.7041 0.70409934 2815 Q5VTL8 PRPF38B Pre-mRNA-splicing factor 38B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.444 76.502 2 1.0647E-05 88305 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 108.47 88.708 107300000 0 0 0 6640700 5573300 7589200 8760000 9316600 6419400 10060000 9568700 18806000 8335700 6328100 9902500 41596 2815 37188 346729;346730;346731;346732;346733;346734;346735;346736;346737;346738;346739;346740 274918;274919;274920;274921;274922;274923;274924;274925;274926;274927;274928;274929 274919 12 QGNVLVISHQAVMR Unmodified 1550.8351 0.83513028 433 O60825 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 56.904 57.151 3 0.010051 65081 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 37.156 29.988 26468000 0 0 0 0 0 6195100 0 5214600 0 4890900 0 0 0 0 10167000 41597 433 37189 346741;346742;346743;346744 274930;274931;274932 274930 3 QGNVLVISHQAVMR Oxidation (M) 1566.83 0.83004491 433 O60825 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase yes yes 0 1 0 By matching By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 48.015 47.881 3 0.0069236 54416 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 43.184 36.706 33299000 0 0 0 6031200 6753700 0 10382000 5763300 0 0 0 0 0 4368400 0 41598 433 37189 346745;346746;346747;346748;346749 274933 274933 556 0 QGPDSERGGEAAR Unmodified 1328.6069 0.60690449 261 O15164 TRIM24 Transcription intermediary factor 1-alpha yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 6.0612 6.2026 3 0.00063276 4374 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 54.524 46.8 35909000 0 0 0 3326500 0 4411100 3974100 2311800 2925400 0 5861800 0 3797300 3201000 6099900 41599 261 37190 346750;346751;346752;346753;346754;346755;346756;346757;346758;346759 274934;274935;274936;274937;274938;274939;274940;274941 274936 8 QGPFTLEEHALPEDK Unmodified 1709.8261 0.82606496 3572 Q8WWH5 TRUB1 Probable tRNA pseudouridine synthase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 67.761 67.174 3 0.00046676 75943 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.608 38.917 128980000 0 34010000 10442000 3766500 3703600 11754000 5153200 0 7575400 7635800 10279000 7180900 7792700 6242500 13441000 41600 3572 37191 346760;346761;346762;346763;346764;346765;346766;346767;346768;346769;346770;346771;346772 274942;274943;274944;274945;274946;274947;274948;274949 274945 8 QGPGPGGPK Unmodified 793.40825 0.40825167 1151 P23246 SFPQ Splicing factor, proline- and glutamine-rich yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 6.7204 6.7315 2 0.028187 4683 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 49.097 22.874 21073000 0 0 0 2574600 2479600 4483200 5414500 0 3822200 0 0 2299300 0 0 0 41601 1151 37192 346773;346774;346775;346776;346777;346778 274950;274951;274952 274950 3 QGPNANLVK Unmodified 939.51378 0.51377937 3326 Q8N3U4 STAG2 Cohesin subunit SA-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 23.523 23.733 2 0.0099297 24716 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 65.313 41.11 92738000 0 0 0 5169100 6220800 10398000 5498600 5512100 0 9154500 9860100 8520800 8564000 8650500 15190000 41602 3326 37193 346779;346780;346781;346782;346783;346784;346785;346786;346787;346788;346789 274953;274954;274955 274955 2 QGPSSGNVSAQPEEDEEDLGIGGLTGK Unmodified 2670.2257 0.22566202 4881 Q9UGJ1 TUBGCP4 Gamma-tubulin complex component 4 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 74.826 74.861 3 1.4156E-05 86468 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 31.771 24.739 33343000 0 0 0 2170200 0 0 4540100 0 0 7175100 0 10948000 3899300 4609900 0 41603 4881 37194 346790;346791;346792;346793;346794;346795 274956;274957 274957 2 QGPTNEAQMAAAAALAR Unmodified 1669.8206 0.82060243 4276 Q9BZV1 UBXN6 UBX domain-containing protein 6 yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 71.742 71.844 3 0.0085734 82219 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 29.274 23.901 27016000 0 0 0 0 1772100 3261800 2187600 2340600 0 4885300 2905900 0 0 2180400 7482900 41604 4276 37195 346796;346797;346798;346799;346800;346801;346802;346803 274958;274959 274959 1 QGPVSQSATQQPVTADK Unmodified 1740.8642 0.86424139 4138 Q9BTA9 WAC WW domain-containing adapter protein with coiled-coil yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 2 1 1 2 1 2 2 2 1 1 1 29.577 29.776 2;3 4.6252E-41 31101 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 191.48 182.75 577800000 0 0 0 24403000 39005000 21250000 25640000 65785000 20141000 67834000 71257000 110190000 46179000 31433000 54683000 41605 4138 37196 346804;346805;346806;346807;346808;346809;346810;346811;346812;346813;346814;346815;346816;346817;346818;346819;346820 274960;274961;274962;274963;274964;274965;274966;274967;274968;274969;274970;274971;274972;274973;274974 274964 15 QGQDNLSSVK Unmodified 1074.5306 0.53055165 1260 P30040 ERP29 Endoplasmic reticulum resident protein 29 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 17.241 16.468 2 0.00046615 16042 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 135.71 101.32 191500000 23849000 45584000 0 7358800 0 11538000 9392900 0 5984000 0 23748000 0 21118000 0 42927000 41606 1260 37197 346821;346822;346823;346824;346825;346826;346827;346828;346829 274975;274976;274977;274978;274979;274980;274981;274982 274980 6 QGQETAVAPSLVAPALNK Unmodified 1792.9683 0.96831253 2564 Q15691 MAPRE1 Microtubule-associated protein RP/EB family member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 2 2 1 2 2 2 2 1 1 2 74.688 74.742 2;3 5.3043E-26 86049 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 135.65 124.33 436240000 0 0 0 19057000 16732000 60604000 25214000 15512000 23703000 55657000 54898000 36470000 21369000 22867000 84152000 41607 2564 37198 346830;346831;346832;346833;346834;346835;346836;346837;346838;346839;346840;346841;346842;346843;346844;346845;346846;346847;346848;346849;346850 274983;274984;274985;274986;274987;274988;274989;274990;274991;274992;274993;274994;274995 274986 13 QGQETAVAPSLVAPALNKPK Unmodified 2018.116 0.1160394 2564 Q15691 MAPRE1 Microtubule-associated protein RP/EB family member 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.994 68.075 3 1.7292E-07 78523 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 69.361 66.024 273650000 0 0 0 23578000 13282000 11441000 27201000 17069000 6013700 29242000 35120000 31775000 19250000 18097000 41584000 41608 2564 37199 346851;346852;346853;346854;346855;346856;346857;346858;346859;346860;346861;346862 274996;274997;274998;274999;275000;275001;275002;275003;275004;275005;275006;275007;275008;275009;275010;275011;275012;275013;275014 275014 19 QGQGQLVTCSGAFK Unmodified 1479.714 0.71401209 2608 Q16531 DDB1 DNA damage-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.525 47.688 2 1.4505E-17 52481 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 155 134.13 233430000 0 0 0 11675000 7269200 13702000 7181500 7791100 6906800 15196000 29639000 43300000 19968000 19907000 50893000 41609 2608 37200 346863;346864;346865;346866;346867;346868;346869;346870;346871;346872;346873;346874 275015;275016;275017;275018;275019;275020;275021;275022;275023;275024;275025;275026 275018 12 QGQISSNYDDAMQFSK Unmodified 1817.789 0.78902753 5127 Q9Y2X9 ZNF281 Zinc finger protein 281 yes yes 0 0 0 By MS/MS 2 0 1 1 64.654 58.736 2 8.9979E-24 75286 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.82 113.95 15691000 0 15691000 0 0 0 0 0 0 0 0 0 0 0 0 0 41610 5127 37201 346875 275027 275027 1 QGQMDAVR Oxidation (M) 919.41816 0.41816443 348 O43633 CHMP2A Charged multivesicular body protein 2a yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 5.7453 5.8627 2 0.0071469 2680 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 78.324 56.642 55946000 0 0 0 3318200 4564800 6497900 5350400 3405200 3804900 5922400 4588400 6409800 3126100 3375200 5582700 41611 348 37202 346876;346877;346878;346879;346880;346881;346882;346883;346884;346885;346886;346887 275028;275029;275030;275031;275032;275033;275034;275035;275036 275035 432 9 QGQMDAVR Unmodified 903.42325 0.4232498 348 O43633 CHMP2A Charged multivesicular body protein 2a yes yes 0 0 0 By MS/MS 2 0 1 1 14.952 11.612 2 0.039951 15462 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.69 57.111 27744000 0 27744000 0 0 0 0 0 0 0 0 0 0 0 0 0 41612 348 37202 346888 275037 275037 1 QGQPAVVSGVHK Unmodified 1205.6517 0.65166983 2561 Q15652 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 26.581 21.785 3 0.040897 28551 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 39.581 27.004 37560000 16932000 20628000 0 0 0 0 0 0 0 0 0 0 0 0 0 41613 2561 37203 346889;346890 275038 275038 0 QGQPEPDATELAR Unmodified 1410.6739 0.67392142 2299 Q13487 SNAPC2 snRNA-activating protein complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.053 39.233 2 0.00017133 42478 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.862 69.744 67722000 0 0 0 5319800 4726400 4773900 4770800 5763600 4672200 6300600 6892100 5835300 6085400 5447500 7134100 41614 2299 37204 346891;346892;346893;346894;346895;346896;346897;346898;346899;346900;346901;346902 275039;275040;275041;275042;275043;275044;275045;275046;275047;275048;275049 275042 11 QGQPKPELQQQEQPEQK Unmodified 2019.0021 0.0021318501 2594 Q15911 ZFHX3 Zinc finger homeobox protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 23.852 24.035 3 0.00027049 25170 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 49.595 46.882 29568000 0 0 0 0 1558200 3575600 2587200 2884000 2218900 3980100 4183000 4102400 4478400 0 0 41615 2594 37205 346903;346904;346905;346906;346907;346908;346909;346910;346911 275050;275051 275050 2 QGQPVLVSGVHK Unmodified 1247.6986 0.69862003 3061 Q7LBC6 KDM3B Lysine-specific demethylase 3B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.81 2.84 4 23 2 1 1 1 2 2 2 2 2 2 2 2 2 2 2 34.495 33.865 2;3 0.00014816 36072 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 84.188 81.654 882000000 175310000 39186000 10811000 32392000 47885000 67288000 44751000 61648000 37711000 60693000 66913000 60180000 55228000 52944000 69056000 41616 3061 37206 346912;346913;346914;346915;346916;346917;346918;346919;346920;346921;346922;346923;346924;346925;346926;346927;346928;346929;346930;346931;346932;346933;346934;346935;346936;346937;346938 275052;275053;275054;275055;275056;275057;275058;275059;275060 275059 3 QGQSNSGVVQVQQK Unmodified 1485.7536 0.75356872 2195 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 20.206 20.369 2 1.8777E-05 20873 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 114.4 95.961 44630000 0 0 0 2862500 2524900 3230300 3125100 3029500 3419800 5527200 5925800 0 6068700 3341800 5574100 41617 2195 37207 346939;346940;346941;346942;346943;346944;346945;346946;346947;346948;346949 275061;275062;275063;275064;275065;275066;275067;275068;275069 275061 9 QGRSEEISESESEETNAPKK Unmodified 2234.0299 0.029862743 1736 P54259 ATN1 Atrophin-1 yes yes 0 0 2 By MS/MS 2 0 1 1 21.522 18.719 4 0.01384 23916 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 28.333 18.596 5050100 0 0 5050100 0 0 0 0 0 0 0 0 0 0 0 0 41618 1736 37208 346950 275070;275071 275070 2 QGSATVGLK Unmodified 859.47633 0.47633123 1193 P25786 PSMA1 Proteasome subunit alpha type-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 20.071 16.395 2 0.015194 21779 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.296 24.015 1762300000 20853000 1715300000 26115000 0 0 0 0 0 0 0 0 0 0 0 0 41619 1193 37209 346951;346952;346953;346954 275072;275073;275074 275073 3 QGSDAYDAQTYDVASK Unmodified 1717.7431 0.7431232 4641 Q9NU22 MDN1 Midasin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.559 41.686 2 7.9644E-32 46145 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 150.21 137.64 64118000 0 0 0 3803300 4155200 4767600 5146800 4859700 4762400 6326700 8312700 7774700 9206500 5002000 0 41620 4641 37210 346955;346956;346957;346958;346959;346960;346961;346962;346963;346964;346965;346966 275075;275076;275077;275078;275079;275080;275081;275082;275083;275084;275085;275086 275084 12 QGSEIQDSPDFR Unmodified 1377.6161 0.61607219 3581 Q8WX93 PALLD Palladin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 41.504 41.558 2 8.4408E-11 46767 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 147.74 132.81 209430000 0 0 0 27140000 21088000 0 32282000 19527000 18757000 0 32221000 0 26222000 32193000 0 41621 3581 37211 346967;346968;346969;346970;346971;346972;346973;346974;346975;346976;346977 275087;275088;275089;275090;275091;275092;275093;275094;275095;275096;275097 275097 11 QGSGPAPTTHK Unmodified 1079.536 0.53597137 4848 Q9UBP0 SPAST Spastin yes yes 0 0 0 By MS/MS 2 0 1 1 6.1735 2.9331 2 0.0029596 5000 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.862 35.301 17512000 0 17512000 0 0 0 0 0 0 0 0 0 0 0 0 0 41622 4848 37212 346978 275098 275098 1 QGSGSSQPMEVQEGYGFGSGDDPYSSAEPHVSGVK Oxidation (M) 3572.5274 0.5273997 2262 Q13263 TRIM28 Transcription intermediary factor 1-beta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 70.141 68.995 3 4.1458E-160 78665 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 156.51 149.9 1280200000 17163000 389920000 0 32577000 61880000 103860000 60676000 51983000 52990000 85152000 90230000 101740000 66442000 62058000 103570000 41623 2262 37213 346979;346980;346981;346982;346983;346984;346985;346986;346987;346988;346989;346990;346991;346992;346993 275099;275100;275101;275102;275103;275104;275105;275106;275107;275108;275109;275110;275111;275112;275113;275114;275115 275105 3691 17 QGSGSSQPMEVQEGYGFGSGDDPYSSAEPHVSGVK Unmodified 3556.5325 0.53248508 2262 Q13263 TRIM28 Transcription intermediary factor 1-beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 3 1 2 1 1 1 1 1 1 1 1 1 1 74.842 73.835 3 0 90431 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 248.83 247.27 1166700000 0 739230000 6352200 10700000 14538000 35932000 15558000 41678000 0 59721000 56498000 45283000 22208000 26997000 91957000 41624 2262 37213 346994;346995;346996;346997;346998;346999;347000;347001;347002;347003;347004;347005;347006;347007;347008;347009 275116;275117;275118;275119;275120;275121;275122;275123;275124;275125;275126;275127;275128;275129;275130;275131;275132 275119 17 QGSLINSLK Unmodified 958.54475 0.54474515 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 49.64 49.752 2 0.029817 56076 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 48.423 13.599 24002000 0 0 0 0 0 12515000 0 0 11488000 0 0 0 0 0 0 41625 1364 37214 347010;347011 275133;275134 275134 2 QGSLINSLKPSGPTPASGQLSSGDK Unmodified 2425.2449 0.24488132 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 66.932 66.946 3 2.5203E-155 76807 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 187.29 182.29 239790000 0 0 0 15910000 22024000 16172000 28392000 44633000 17424000 0 0 0 29742000 26710000 38786000 41626 1364 37215 347012;347013;347014;347015;347016;347017;347018;347019;347020 275135;275136;275137;275138;275139;275140;275141;275142;275143;275144;275145;275146;275147 275141 13 QGSQPRGQQSAEEENFK Unmodified 1918.8769 0.87693134 2472 Q15014 MORF4L2 Mortality factor 4-like protein 2 yes yes 0 0 1 By MS/MS 2 0 1 1 22.104 18.221 3 0.0010075 24119 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 47.64 37.264 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41627 2472 37216 347021 275148 275148 1 QGSSAEQPLGGR Unmodified 1185.5738 0.57381344 2854 Q68CZ2 TNS3 Tensin-3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 2 1 1 1 1 1 1 1 17.755 17.858 2 0.0015314 18362 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 67.113 57.332 50710000 0 0 0 4306000 5634900 7861900 5751400 0 0 5718800 0 7495500 0 4825100 9116500 41628 2854 37217 347022;347023;347024;347025;347026;347027;347028;347029;347030;347031 275149;275150;275151;275152;275153;275154;275155 275154 6 QGSSAGSSSSYGQHGSGSR Unmodified 1782.7517 0.75173082 104 CON__Q86YZ3;Q86YZ3 HRNR Hornerin yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 21 2 1 2 2 2 2 2 2 2 2 1 1 6.1721 6.2884 2;3 7.6019E-39 4372 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 116.6 109.19 + 176450000 0 0 0 23071000 10889000 11295000 8165800 41613000 7019800 13445000 15441000 18821000 14111000 6383200 6195800 41629 104 37218 347032;347033;347034;347035;347036;347037;347038;347039;347040;347041;347042;347043;347044;347045;347046;347047;347048;347049;347050;347051;347052 275156;275157;275158;275159;275160;275161;275162;275163;275164;275165;275166 275163 11 QGSTQGRLDDFFK Unmodified 1497.7212 0.72120596 1405 P39748 FEN1 Flap endonuclease 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.789 61.889 3 0.0042322 69760 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.594 25.678 122360000 0 0 0 6175600 2971500 19073000 10708000 4280100 8904500 10408000 9564800 15689000 7612100 5922900 21054000 41630 1405 37219 347053;347054;347055;347056;347057;347058;347059;347060;347061;347062;347063;347064 275167;275168;275169;275170 275168 4 QGSYHEQSVDR Unmodified 1304.5745 0.57454173 78 CON__P20930;P20930 FLG Filaggrin yes no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 6 1 1 1 1 1 1 8.2903 8.363 3 0.030668 6256 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 28.806 0 + 12525000 0 0 0 2025600 1215300 0 0 1031500 888270 2523300 0 4840700 0 0 0 41631 78 37220 347065;347066;347067;347068;347069;347070 275171 275171 1 QGTAGSVINNPYVIMDK Oxidation (M) 1821.8931 0.89309867 5000 Q9ULM3 YEATS2 YEATS domain-containing protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 65.799 66.033 2 0.00025635 75766 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 60.628 49.096 12743000 0 0 0 0 0 0 2527600 0 0 3841800 0 6373900 0 0 0 41632 5000 37221 347071;347072;347073 275172;275173 275172 6344 2 QGTAGSVINNPYVIMDK Unmodified 1805.8982 0.89818405 5000 Q9ULM3 YEATS2 YEATS domain-containing protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 80.604 75.891 2 0.00014254 94500 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.219 56.686 41736000 0 41736000 0 0 0 0 0 0 0 0 0 0 0 0 0 41633 5000 37221 347074 275174 275174 1 QGTAVEVEAESLDPTVK Unmodified 1771.884 0.88397377 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 8 3.46 1 3 1 1 1 1 70.561 69.506 2 0.00012221 79291 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.705 61.799 30257000 0 17974000 0 0 0 0 0 0 0 0 2793800 0 0 3296000 6193900 41634 1564 37222 347075;347076;347077;347078 275175;275176;275177 275176 3 QGTAVEVEAESLDPTVKPVDVGGDEPEEK Unmodified 3023.4459 0.44588513 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.47 3.59 3 2 10 1 4 1 1 1 1 1 1 1 1 1 1 78.032 76.485 3 0 93366 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 297.46 288.96 716930000 17775000 562890000 0 0 5116100 6017000 4751200 0 5731900 9564500 23649000 23468000 6526900 15436000 36012000 41635 1564 37223 347079;347080;347081;347082;347083;347084;347085;347086;347087;347088;347089;347090;347091;347092;347093 275178;275179;275180;275181;275182;275183;275184;275185;275186;275187;275188;275189;275190;275191;275192;275193;275194;275195 275181 18 QGTEIDGR Unmodified 874.41446 0.41445926 1085 P19338 NCL Nucleolin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 9.416 9.5835 2 0.012186 8015 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 75.213 38.818 100770000 0 0 0 16629000 0 0 0 15247000 10157000 7864800 0 15290000 15956000 0 19626000 41636 1085 37224 347094;347095;347096;347097;347098;347099;347100 275196;275197;275198;275199 275197 4 QGTEIDGRSISLYYTGEK Unmodified 2015.98 0.97999942 1085 P19338 NCL Nucleolin yes yes 0 0 1 By MS/MS 2 0 1 1 76.024 67.894 3 0.034712 89545 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 36.856 24.193 12814000 12814000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41637 1085 37225 347101 275200 275200 0 QGTFHSQQALEYGTK Unmodified 1693.806 0.80599822 1716 P53597 SUCLG1 Succinyl-CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 41.61 37.942 3 0.0097002 47908 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 39.776 19.651 9194100 0 0 9194100 0 0 0 0 0 0 0 0 0 0 0 0 41638 1716 37226 347102 275201;275202 275202 2 QGTGLQGQAVFK Unmodified 1232.6513 0.65133548 3560 Q8WVC0 LEO1 RNA polymerase-associated protein LEO1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.288 47.452 2 9.2128E-11 52752 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 147.41 105.78 447680000 0 0 0 19623000 22005000 27502000 27577000 24098000 21281000 41235000 55926000 54415000 51564000 46641000 55814000 41639 3560 37227 347103;347104;347105;347106;347107;347108;347109;347110;347111;347112;347113;347114 275203;275204;275205;275206;275207;275208;275209;275210;275211 275209 9 QGTIFLAGPPLVK Unmodified 1339.7864 0.7863724 4509 Q9HCC0 MCCC2 Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 90.639 82.509 2 0.00012831 107154 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.943 82.7 19355000 19355000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41640 4509 37228 347115 275212 275212 1 QGTPLIAFSLLPHEQK Unmodified 1777.9727 0.97266962 2654 Q2NL82 TSR1 Pre-rRNA-processing protein TSR1 homolog yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 87.623 87.765 3 0.012226 101539 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 31.765 22.235 21089000 0 0 0 0 0 2091200 0 1508100 1453500 2995900 1692500 2130500 0 1061200 8156400 41641 2654 37229 347116;347117;347118;347119;347120;347121;347122;347123 275213 275213 1 QGTPMCVPSK Unmodified 1103.5104 0.51035025 437 O60841 EIF5B Eukaryotic translation initiation factor 5B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 30.842 31.14 2 0.0060298 34456 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 66.568 36.401 49904000 0 0 0 3721800 0 0 4373500 0 0 5823600 7135700 9685900 6454000 4094500 8615500 41642 437 37230 347124;347125;347126;347127;347128;347129;347130;347131 275214;275215;275216;275217;275218;275219;275220;275221 275221 8 QGTQYTFSSIEREEYGK Unmodified 2021.933 0.93304923 2163 Q08945 SSRP1 FACT complex subunit SSRP1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 61.912 61.716 3 2.5105E-05 70341 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 70.335 60.236 201500000 0 0 35633000 5600100 6832900 16878000 8608200 14879000 9438400 15629000 17103000 21255000 11847000 15522000 22278000 41643 2163 37231 347132;347133;347134;347135;347136;347137;347138;347139;347140;347141;347142;347143;347144 275222;275223;275224;275225;275226;275227;275228;275229;275230;275231;275232;275233;275234;275235;275236 275228 15 QGTTPPIWHLTDK Unmodified 1492.7674 0.76742787 1766 P55265 ADAR Double-stranded RNA-specific adenosine deaminase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 66.457 66.611 3 0.021309 76212 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 24.415 11.435 81167000 0 0 0 0 2706300 6447400 5398300 5983800 4382500 7099600 8630600 9594500 8758100 8803800 13362000 41644 1766 37232 347145;347146;347147;347148;347149;347150;347151;347152;347153;347154;347155 275237;275238;275239;275240 275239 4 QGTYGGYFR Unmodified 1047.4774 0.47739386 4033 Q99613;B5ME19 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 43.146 43.307 2 0.0033419 48516 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 90.37 71.831 158980000 0 0 0 9909800 10115000 11680000 9929900 8476300 0 18933000 23793000 22688000 0 19140000 24318000 41645 4033 37233 347156;347157;347158;347159;347160;347161;347162;347163;347164;347165 275241;275242;275243;275244;275245;275246;275247;275248 275245 8 QGTYGGYFRDQK Unmodified 1418.6579 0.65787742 4033 Q99613;B5ME19 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 0 0 1 By MS/MS 2 0 1 1 41.945 35.21 3 0.003683 48779 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.252 48.917 51615000 51615000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41646 4033 37234 347166 275249 275249 1 QGVAEAAGK Unmodified 829.42938 0.42938104 1393 P37840 SNCA Alpha-synuclein yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching 6.8 3.92 2 3 1 1 1 1 1 7.4703 6.1532 2 0.01892 6997 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.072 45.768 24844000 2902400 15759000 0 0 0 1423000 2702300 0 2056600 0 0 0 0 0 0 41647 1393 37235 347167;347168;347169;347170;347171 275250;275251 275251 2 QGVASVQVTPEAPAAAQQGTESSAVLEK Unmodified 2752.3879 0.38791674 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 70.998 71.149 3 5.9001E-31 81324 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.355 73.001 56338000 0 0 0 0 4705400 0 4944500 3715700 3441000 5586900 5453300 10775000 4728600 4204100 8783500 41648 645 37236 347172;347173;347174;347175;347176;347177;347178;347179;347180;347181 275252;275253;275254;275255;275256;275257;275258;275259;275260;275261;275262;275263 275254 12 QGVDADINGLR Unmodified 1156.5836 0.58364985 1354 P35527;CON__P35527 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 2 2 1 1 2 1 2 1 2 1 1 1 50.231 50.376 2 6.1932E-60 56036 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 195.48 157.75 + 34032000000 0 0 0 4599800000 2723200000 2274200000 1627700000 8070900000 1729300000 2644400000 2481200000 2658400000 2770800000 1231100000 1221200000 41649 1354 37237 347182;347183;347184;347185;347186;347187;347188;347189;347190;347191;347192;347193;347194;347195;347196;347197;347198 275264;275265;275266;275267;275268;275269;275270;275271;275272;275273;275274;275275;275276;275277;275278;275279;275280;275281;275282;275283;275284;275285;275286;275287;275288;275289;275290;275291;275292;275293;275294;275295;275296;275297;275298 275266 35 QGVFSSLNHIVEK Unmodified 1456.7674 0.76742787 2860 Q68E01 INTS3 Integrator complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 70.911 71.109 3 0.023137 81899 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 29.937 17.791 39063000 0 0 0 0 0 5440100 0 3277700 2542900 3833600 3574500 4558100 3648000 2680600 9507600 41650 2860 37238 347199;347200;347201;347202;347203;347204;347205;347206;347207 275299 275299 1 QGVHAAGAAEAGPLASVPAQSAK Unmodified 2087.076 0.075965495 3863 Q96H79 ZC3HAV1L Zinc finger CCCH-type antiviral protein 1-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 58.073 52.373 3 1.1606E-115 67897 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 166.91 154.42 189960000 47954000 117010000 24999000 0 0 0 0 0 0 0 0 0 0 0 0 41651 3863 37239 347208;347209;347210;347211 275300;275301;275302;275303;275304;275305;275306;275307;275308 275301 9 QGVLTHGR Unmodified 866.47225 0.47224891 1909 P62753 RPS6 40S ribosomal protein S6 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.705 7.8313 2 0.0068592 5758 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 93.561 69.766 124880000 0 0 0 5762500 8191100 6296900 9550800 8250000 7233900 11213000 23580000 13459000 12228000 7020500 12097000 41652 1909 37240 347212;347213;347214;347215;347216;347217;347218;347219;347220;347221;347222;347223 275309;275310;275311;275312 275311 4 QGVPMNSLR Unmodified 1000.5124 0.51239916 1942 P63165 SUMO1 Small ubiquitin-related modifier 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 39.37 39.886 2 0.011592 43111 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.582 44.447 36578000 0 0 0 0 0 0 0 0 0 0 0 0 0 10813000 25765000 41653 1942 37241 347224;347225 275313;275314 275313 2 QGVTEAAEK Unmodified 931.46108 0.4610751 574 O76070 SNCG Gamma-synuclein no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 8.449 8.0372 2 0.0023289 6904 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 128.12 82.105 630830000 0 79128000 0 0 42726000 30098000 0 33717000 36360000 30122000 128190000 62168000 44195000 42970000 101150000 41654 574 37242 347226;347227;347228;347229;347230;347231;347232;347233;347234;347235;347236;347237 275315;275316;275317;275318;275319;275320;275321;275322;275323;275324;275325 275323 8 QGYGEGFR Unmodified 912.40898 0.40897995 4589;5274 Q9NR31;Q9Y6B6 SAR1A;SAR1B GTP-binding protein SAR1a;GTP-binding protein SAR1b no no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 26.315 26.544 2 0.011504 28362 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 76.774 62.11 96242000 0 0 0 6742800 0 8836600 14267000 5969500 2561200 10548000 0 19158000 12452000 7355900 8350400 41655 4589;5274 37243 347238;347239;347240;347241;347242;347243;347244;347245;347246;347247 275326;275327;275328 275326 3 QGYPEGYYSSK Unmodified 1277.5564 0.55643205 242 O15027 SEC16A Protein transport protein Sec16A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.524 33.71 2 0.0016022 35954 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 71.614 36.169 58916000 0 0 0 4517500 4476900 3220900 4174500 5455000 2798300 5752400 4160400 6779900 5756700 4281200 7542000 41656 242 37244 347248;347249;347250;347251;347252;347253;347254;347255;347256;347257;347258;347259 275329;275330;275331;275332;275333;275334 275331 6 QGYVIYR Unmodified 897.47085 0.47085192 1845 P61313 RPL15 60S ribosomal protein L15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 40.704 40.883 2 0.033465 44281 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 71.949 43.421 309080000 0 0 0 49887000 13119000 21004000 18649000 0 13050000 36263000 31390000 42557000 30272000 20472000 32418000 41657 1845 37245 347260;347261;347262;347263;347264;347265;347266;347267;347268;347269;347270 275335 275335 1 QGYVLSSIEGR Unmodified 1207.6197 0.619701 355 O43684 BUB3 Mitotic checkpoint protein BUB3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61.269 60.156 2 1.2178E-05 68661 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 137.46 106.16 1487700000 24233000 29696000 8028800 60251000 68439000 85172000 122490000 84626000 88556000 163310000 144770000 135140000 110980000 112370000 249580000 41658 355 37246 347271;347272;347273;347274;347275;347276;347277;347278;347279;347280;347281;347282;347283;347284;347285 275336;275337;275338;275339;275340;275341;275342;275343;275344;275345;275346;275347;275348;275349;275350;275351 275347 15 QHAALAAQSK Unmodified 1023.5461 0.54614213 196 O14639 ABLIM1 Actin-binding LIM protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 8.427 4.7884 2 0.00093079 8388 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 122.33 55.16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41659 196 37247 347286 275352 275352 1 QHAAVLEEGVLDPK Unmodified 1504.7886 0.78855725 642 O95340 PAPSS2 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.16 3.73 5 2 12 3 3 1 1 1 1 1 1 1 1 1 1 1 2 58.799 56.686 2;3 2.294E-46 71456 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 145 134.05 439080000 30804000 159010000 101690000 5940300 5680300 17491000 12961000 11341000 7983500 13801000 14730000 19539000 11525000 0 26578000 41660 642 37248 347287;347288;347289;347290;347291;347292;347293;347294;347295;347296;347297;347298;347299;347300;347301;347302;347303;347304;347305 275353;275354;275355;275356;275357;275358;275359;275360;275361;275362;275363;275364;275365;275366;275367;275368;275369;275370;275371;275372;275373;275374;275375 275367 22 QHALCVGVMK Unmodified 1141.5736 0.57361921 4990 Q9ULC4 MCTS1 Malignant T-cell-amplified sequence 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.4 3.2 1 4 1 1 1 1 1 40.149 38.944 3 0.004261 56800 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 91.087 79.029 90257000 75285000 0 0 0 0 2413100 0 0 0 0 0 2536500 0 3529200 6493300 41661 4990 37249 347306;347307;347308;347309;347310 275376;275377 275377 1 QHALCVGVMK Oxidation (M) 1157.5685 0.56853383 4990 Q9ULC4 MCTS1 Malignant T-cell-amplified sequence 1 yes yes 0 1 0 By MS/MS 2 0 1 1 34.062 27.83 3 0.010144 39487 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.751 41.885 64052000 64052000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41662 4990 37249 347311 275378;275379 275378 6336 2 QHALLQEELRR Unmodified 1391.7633 0.76334555 3693 Q92974 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 37.704 37.885 3 0.003855 40249 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.004 34.6 230850000 0 0 0 9563300 2920300 0 17723000 27047000 21626000 15143000 17221000 56681000 0 16834000 46095000 41663 3693 37250 347312;347313;347314;347315;347316;347317;347318;347319;347320;347321;347322 275380;275381;275382;275383;275384;275385;275386 275382 6 QHAMQCVQCK Unmodified 1288.5475 0.54748081 2389 Q14192 FHL2 Four and a half LIM domains protein 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 12.971 9.8413 3 0.0053126 14953 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.607 67.992 19827000 17174000 0 2652400 0 0 0 0 0 0 0 0 0 0 0 0 41664 2389 37251 347323;347324 275387 275387 0 QHAYEHSLGK Unmodified 1168.5625 0.56252048 421 O60664 PLIN3 Perilipin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 19 2 2 2 2 2 1 1 1 1 1 2 2 8.9636 9.071 2;3 0.0025558 6048 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 70.808 63.408 362710000 0 0 0 2663900 27846000 28567000 38097000 36269000 1391100 2959200 120600000 7203400 4796100 33188000 59126000 41665 421 37252 347325;347326;347327;347328;347329;347330;347331;347332;347333;347334;347335;347336;347337;347338;347339;347340;347341;347342;347343 275388;275389;275390;275391;275392;275393;275394 275390 6 QHDQLEAQK Unmodified 1095.5309 0.530886 1992 P80303 NUCB2 Nucleobindin-2;Nesfatin-1 yes yes 0 0 0 By MS/MS By matching 2 0 3 2 1 24.304 20.58 2 0.0087887 27582 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.142 14.727 39288000 0 35951000 3336100 0 0 0 0 0 0 0 0 0 0 0 0 41666 1992 37253 347344;347345;347346 275395 275395 1 QHEAPSNRPLNELLTPQGPSPR Unmodified 2437.2462 0.24621872 919 P10398 ARAF Serine/threonine-protein kinase A-Raf yes yes 0 0 1 By matching By matching By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 63.333 63.583 4 0.0088987 71765 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 26.018 18.306 40606000 0 0 0 0 0 8192300 0 0 4512700 8057800 0 5275400 0 4333600 10234000 41667 919 37254 347347;347348;347349;347350;347351;347352 275396 275396 1 QHELSESCSASALQAR Unmodified 1772.8112 0.81115996 3434 Q8NEZ2 VPS37A Vacuolar protein sorting-associated protein 37A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 34.404 34.586 3 0.00022708 38145 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 65.467 61.249 48803000 0 0 0 5115100 0 9185100 0 0 0 6603000 0 0 11112000 7077100 9710000 41668 3434 37255 347353;347354;347355;347356;347357;347358;347359;347360 275397;275398;275399;275400;275401;275402;275403;275404 275397 8 QHEQPGQGIAPDAVNGQR Unmodified 1900.914 0.91398554 1638 P50851 LRBA Lipopolysaccharide-responsive and beige-like anchor protein yes yes 0 0 0 By MS/MS By matching By MS/MS By matching 10 0 4 1 1 1 1 33.702 33.998 3 0.0025256 36498 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 45.876 38.817 29714000 0 0 0 0 0 7698200 0 0 0 6228000 0 0 0 5838300 9949600 41669 1638 37256 347361;347362;347363;347364 275405;275406 275406 0 QHESIPGK Unmodified 894.45593 0.45593014 4299 Q9GZP8 IMUP Immortalization up-regulated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 8.7093 7.9418 2 0.0041325 9777 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 118.74 81.213 593490000 95991000 366390000 52311000 5465300 4439200 0 5163900 6421000 0 1005500 32413000 0 9226100 0 14669000 41670 4299 37257 347365;347366;347367;347368;347369;347370;347371;347372;347373;347374;347375 275407;275408;275409 275409 3 QHEVEEATNILTATRK Unmodified 1838.9486 0.94863972 2491 Q15057 ACAP2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 yes yes 0 0 1 By MS/MS 2 0 1 1 65.459 57.171 3 0.025358 76679 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 18.371 18.371 27947000 27947000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41671 2491 37258 347376 275410 275410 1 QHEVEIPSPTQK Unmodified 1391.7045 0.70449327 2159 Q08499 PDE4D cAMP-specific 3',5'-cyclic phosphodiesterase 4D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 5.25 3.7 3 2 3 1 3 1 1 1 1 41.148 38.087 2;3 3.5979E-05 49510 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.61 99.163 173460000 11306000 99151000 48904000 0 3620700 0 0 0 0 0 7460000 3017200 0 0 0 41672 2159 37259 347377;347378;347379;347380;347381;347382;347383;347384 275411;275412;275413;275414;275415;275416 275411 4 QHFISFDTDR Unmodified 1264.5836 0.58364985 1287 P30626 SRI Sorcin yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 51.957 52.352 3 0.040189 58026 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.489 38.338 51835000 0 0 0 0 0 0 0 0 0 0 0 0 11715000 9924700 30196000 41673 1287 37260 347385;347386;347387 275417 275417 0 QHFPATPLLDYALEVEK Unmodified 1970.0149 0.014928368 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 90.641 90.673 3 0.003008 105016 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 40.798 31.979 5797200 0 0 0 797530 0 0 0 2289900 0 1577700 0 0 0 0 1132100 41674 1714 37261 347388;347389;347390;347391 275418;275419 275418 2 QHGAVQSGGLNPELNDK Unmodified 1762.8598 0.85982471 4900 Q9UHF7 TRPS1 Zinc finger transcription factor Trps1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.7 3.52 2 1 7 2 1 1 1 1 1 1 1 1 37.395 36.252 3 0.00019327 45663 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 58.83 40.373 61189000 0 18806000 6464200 0 0 5188000 4511300 4066000 0 3609800 6469900 0 4751600 0 7322800 41675 4900 37262 347392;347393;347394;347395;347396;347397;347398;347399;347400;347401 275420;275421;275422;275423 275423 4 QHGDVVSAIRAGGDETK Unmodified 1738.8598 0.85982471 209 O14745 SLC9A3R1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 yes yes 0 0 1 By MS/MS By MS/MS 2.17 0.373 5 1 4 2 41.942 36.475 2;3;4 7.8556E-05 50292 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.953 45.141 227300000 213760000 0 13539000 0 0 0 0 0 0 0 0 0 0 0 0 41676 209 37263 347402;347403;347404;347405;347406;347407 275424;275425;275426;275427;275428;275429;275430;275431;275432 275426 7 QHGEQLGGGGSGGGGYNNSK Unmodified 1859.8147 0.81466543 2425 Q14671 PUM1 Pumilio homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.334 12.483 3 2.3849E-109 10884 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 180.03 175.79 187630000 0 0 0 9575400 10437000 10630000 11749000 14497000 11210000 20482000 10636000 34420000 16366000 15316000 22313000 41677 2425 37264 347408;347409;347410;347411;347412;347413;347414;347415;347416;347417;347418;347419 275433;275434;275435;275436;275437;275438;275439;275440;275441;275442;275443;275444 275437 11 QHGIPIPVTPK Unmodified 1185.687 0.68699271 737 P00966 ASS1 Argininosuccinate synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.9 3.81 12 4 24 6 5 5 2 2 2 2 2 2 2 2 2 2 2 2 58.453 56.39 2;3 2.9348E-07 76872 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 147.75 125.67 16335000000 7522900000 4332500000 2811700000 67093000 49145000 69759000 94708000 62213000 58846000 96694000 263860000 180730000 65975000 191470000 467750000 41678 737 37265 347420;347421;347422;347423;347424;347425;347426;347427;347428;347429;347430;347431;347432;347433;347434;347435;347436;347437;347438;347439;347440;347441;347442;347443;347444;347445;347446;347447;347448;347449;347450;347451;347452;347453;347454;347455;347456;347457;347458;347459 275445;275446;275447;275448;275449;275450;275451;275452;275453;275454;275455;275456;275457;275458;275459;275460;275461;275462;275463;275464;275465;275466;275467;275468;275469;275470;275471;275472;275473;275474;275475;275476;275477;275478;275479;275480;275481;275482;275483;275484;275485;275486;275487;275488;275489;275490;275491;275492;275493;275494;275495;275496;275497;275498;275499;275500;275501;275502;275503;275504 275471 51 QHGSNTFTVK Unmodified 1117.5516 0.55162144 162 O00499 BIN1 Myc box-dependent-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 20.604 16.939 2 0.030147 21390 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 58.916 33.179 261040000 188760000 28923000 43364000 0 0 0 0 0 0 0 0 0 0 0 0 41679 162 37266 347460;347461;347462 275505 275505 1 QHGVNLSTPTPPFQQASGYGQHGYSTGYDDLTQGTAAGDYSK Unmodified 4400.9847 0.98465047 2779 Q5T6F2 UBAP2 Ubiquitin-associated protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 81.874 73.744 4 1.2117E-71 96639 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.111 88.299 29526000 29526000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41680 2779 37267 347463 275506;275507 275507 2 QHIAELEIQK Unmodified 1207.6561 0.65608651 401 O60447 EVI5 Ecotropic viral integration site 5 protein homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 55.952 55.217 2 0.0066962 62675 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 64.265 0 157820000 0 29181000 16688000 7955800 7637200 0 9413200 8177700 10398000 12668000 14194000 16190000 12144000 13176000 0 41681 401 37268 347464;347465;347466;347467;347468;347469;347470;347471;347472;347473;347474;347475 275508;275509;275510;275511;275512;275513;275514;275515;275516;275517 275512 10 QHIEVLK Unmodified 865.50215 0.50215205 3217;250 Q8IUD2;O15083 ERC1;ERC2 ELKS/Rab6-interacting/CAST family member 1;ERC protein 2 no no 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 29.718 25.305 2 0.026662 35534 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.523 15.852 101870000 82944000 0 18928000 0 0 0 0 0 0 0 0 0 0 0 0 41682 3217;250 37269 347476;347477 275518 275518 1 QHIIPLENVTIDSIK Unmodified 1718.9567 0.95668521 4456 Q9H8W4 PLEKHF2 Pleckstrin homology domain-containing family F member 2 yes yes 0 0 0 By MS/MS 2 0 1 1 87.564 79.434 3 0.00017234 103411 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.497 74.154 8643800 8643800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41683 4456 37270 347478 275519;275520 275519 2 QHIPLEEYAANLK Unmodified 1524.7936 0.79364262 2655 Q2TAA2 IAH1 Isoamyl acetate-hydrolyzing esterase 1 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 79.617 71.486 3 6.5286E-05 93635 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.026 79.245 272820000 272820000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41684 2655 37271 347479 275521 275521 1 QHIQVFIDR Unmodified 1154.6196 0.61964142 4653 Q9NUQ8 ABCF3 ATP-binding cassette sub-family F member 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 49.719 50.105 3 0.0023596 55859 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 82.645 67.966 80489000 0 0 0 0 0 0 0 9367300 0 10940000 0 26147000 14940000 3627700 15468000 41685 4653 37272 347480;347481;347482;347483;347484;347485;347486 275522;275523;275524;275525;275526;275527;275528 275528 7 QHLEETTQK Unmodified 1112.5462 0.54620171 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.1679 6.2853 2 0.0091747 4069 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 67.494 36.99 37677000 0 0 0 3116400 2901200 3794500 5149400 3506600 3390700 2146400 3664100 3129800 1870000 1909900 3097900 41686 965 37273 347487;347488;347489;347490;347491;347492;347493;347494;347495;347496;347497;347498 275529;275530;275531;275532;275533 275529 5 QHLEIELK Unmodified 1008.5604 0.56039521 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching 10 0 6 1 1 1 1 1 1 46.191 46.607 2 0.034714 52548 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 52.937 14.1 36700000 0 0 0 0 0 4624800 0 8756800 0 0 6134900 7136900 7256900 0 2789500 41687 1029 37274 347499;347500;347501;347502;347503;347504 275534 275534 1 QHLEITGGQVR Unmodified 1236.6575 0.65748349 1528 P47897 QARS Glutamine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 25 2 2 2 3 2 2 2 2 2 2 2 2 32.535 32.712 2;3 0.0001817 35564 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 72.922 60.346 261880000 0 0 0 15921000 12041000 24121000 19305000 19834000 12142000 22656000 25095000 34061000 21811000 21169000 33726000 41688 1528 37275 347505;347506;347507;347508;347509;347510;347511;347512;347513;347514;347515;347516;347517;347518;347519;347520;347521;347522;347523;347524;347525;347526;347527;347528;347529 275535;275536;275537;275538;275539;275540;275541;275542;275543;275544;275545 275536 9 QHLENDPGSNEDTDIPK Unmodified 1907.8497 0.84971353 324 O43396 TXNL1 Thioredoxin-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.57 3.85 3 1 3 1 2 1 1 1 1 37.155 32.29 3 6.0907E-88 42410 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 160.93 159.02 537960000 18108000 515670000 4183000 0 0 0 0 0 0 0 0 0 0 0 0 41689 324 37276 347530;347531;347532;347533;347534;347535;347536 275546;275547;275548;275549;275550;275551;275552 275546 7 QHLFYGQYEGK Unmodified 1368.6463 0.64625011 3946 Q96P70 IPO9 Importin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 1 2 1 1 1 2 2 1 2 2 2 42.597 42.827 2;3 0.00026321 47052 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 68.355 60.251 233150000 0 0 0 7523500 5908000 34925000 9625600 10658000 5976400 27229000 30757000 19173000 19732000 19336000 42311000 41690 3946 37277 347537;347538;347539;347540;347541;347542;347543;347544;347545;347546;347547;347548;347549;347550;347551;347552;347553;347554 275553;275554;275555;275556;275557;275558;275559 275558 7 QHLNPPGGK Unmodified 946.49846 0.49846366 4460 Q9H910 HN1L Hematological and neurological expressed 1-like protein yes yes 0 0 0 By MS/MS 2 0 1 1 12.157 9.8926 2 0.027446 13089 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 68.787 43.788 10862000 0 0 10862000 0 0 0 0 0 0 0 0 0 0 0 0 41691 4460 37278 347555 275560 275560 1 QHLSNMEVQVASQSSQR Oxidation (M) 1943.9119 0.91193663 965 P12270 TPR Nucleoprotein TPR yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 28.81 28.248 3 6.7188E-40 30156 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 144.46 122.62 267980000 7593900 0 2952800 12878000 14616000 17553000 20931000 0 16275000 29152000 34900000 31898000 31818000 21461000 25947000 41692 965 37279 347556;347557;347558;347559;347560;347561;347562;347563;347564;347565;347566;347567;347568 275561;275562;275563;275564;275565;275566;275567;275568;275569;275570;275571;275572;275573;275574 275569 1269 14 QHLSNMEVQVASQSSQR Unmodified 1927.917 0.91702201 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41.951 41.272 3 1.062E-126 45748 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 165.89 151.1 252050000 14870000 0 1134100 10678000 9610400 22987000 12674000 12975000 10876000 17507000 23647000 30617000 19443000 23157000 41876000 41693 965 37279 347569;347570;347571;347572;347573;347574;347575;347576;347577;347578;347579;347580;347581;347582 275575;275576;275577;275578;275579;275580;275581;275582;275583;275584;275585;275586;275587;275588;275589;275590;275591;275592 275584 18 QHLSNMEVQVASQSSQRTGK Oxidation (M) 2230.076 0.07604185 965 P12270 TPR Nucleoprotein TPR yes yes 0 1 1 By MS/MS 2 0 1 1 31.152 25.434 3 5.7639E-99 35564 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 167.14 152.53 38533000 38533000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41694 965 37280 347583 275593;275594 275594 1269 2 QHLSNMEVQVASQSSQRTGK Unmodified 2214.0811 0.081127228 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 1 By MS/MS 2 0 2 2 45.638 38.646 3;4 1.5357E-103 53279 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 177.02 160.71 129190000 129190000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41695 965 37280 347584;347585 275595;275596;275597;275598 275596 4 QHLSSVVFIK Unmodified 1156.6604 0.66044361 319 O43324 EEF1E1 Eukaryotic translation elongation factor 1 epsilon-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 57.235 57.53 3 0.0073391 65431 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 54.066 40.257 68962000 0 0 0 0 0 14787000 4477700 7193700 0 9071500 7447000 9280400 0 0 16704000 41696 319 37281 347586;347587;347588;347589;347590;347591;347592 275599;275600;275601 275600 3 QHMDITGEENPLNK Unmodified 1624.7515 0.75151981 4394 Q9H4A4 RNPEP Aminopeptidase B yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 48.259 48.84 3 4.8008E-08 55006 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 71.513 63.199 69304000 0 0 0 0 0 0 0 0 0 0 13211000 0 0 0 56093000 41697 4394 37282 347593;347594 275602;275603 275603 2 QHNIFLDQMTIDEDK Oxidation (M) 1861.8516 0.85162779 1695 P52732 KIF11 Kinesin-like protein KIF11 yes yes 0 1 0 By MS/MS 2 0 1 1 65.141 61.385 3 0.00077996 76067 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 60.55 55.177 6426400 0 0 6426400 0 0 0 0 0 0 0 0 0 0 0 0 41698 1695 37283 347595 275604 275604 2748 1 QHPDPDSSVK Unmodified 1108.5149 0.51490158 1638 P50851 LRBA Lipopolysaccharide-responsive and beige-like anchor protein yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 9.5073 6.1987 2 0.038703 8830 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 55.549 37.514 35611000 0 35611000 0 0 0 0 0 0 0 0 0 0 0 0 0 41699 1638 37284 347596;347597 275605 275605 1 QHPSVSLQQYK Unmodified 1313.6728 0.67279921 2996 Q6YHU6 THADA Thyroid adenoma-associated protein yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 41.923 36.211 2;3 0.0043337 49771 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.95 41.843 48814000 43377000 0 5437200 0 0 0 0 0 0 0 0 0 0 0 0 41700 2996 37285 347598;347599;347600 275606;275607 275606 2 QHPVPPPAQNQNQVR Unmodified 1708.8757 0.87574954 2595 Q15942 ZYX Zyxin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 21.558 21.347 3 7.1072E-27 22193 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 96.756 84.471 285050000 10676000 0 0 13449000 8335800 13518000 18723000 16353000 13953000 24589000 27101000 29034000 17187000 36855000 55280000 41701 2595 37286 347601;347602;347603;347604;347605;347606;347607;347608;347609;347610;347611;347612;347613 275608;275609;275610;275611;275612;275613;275614;275615;275616;275617;275618;275619;275620;275621;275622 275621 14 QHPVPPPAQNQNQVRSPGAPGPLTLK Unmodified 2727.4569 0.4568802 2595 Q15942 ZYX Zyxin yes yes 0 0 1 By MS/MS 2 0 2 2 66.721 58.426 3;4 4.2324E-05 78188 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.39 48.08 28758000 28758000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41702 2595 37287 347614;347615 275623;275624 275623 2 QHPYTFPGGSGTVFAR Unmodified 1720.8322 0.8321534 2177 Q10471 GALNT2 Polypeptide N-acetylgalactosaminyltransferase 2;Polypeptide N-acetylgalactosaminyltransferase 2 soluble form yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 66.502 66.622 3 0.022244 76950 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 38.116 29.939 80766000 0 0 0 0 3003200 12869000 8114000 0 7086600 8936700 2312300 0 8510400 8522500 21411000 41703 2177 37288 347616;347617;347618;347619;347620;347621;347622;347623;347624 275625 275625 0 QHQMQLVDSIVRQR Unmodified 1736.9104 0.91042049 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 1 By MS/MS 10 0 1 1 43.95 44.01 3 0.019508 49311 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 36.292 26.723 7846900 0 0 0 0 0 0 7846900 0 0 0 0 0 0 0 0 41704 965 37289 347625 275626 275626 1 QHSDPNEQVTRK Unmodified 1437.6961 0.69605384 812 P05549 TFAP2A Transcription factor AP-2-alpha yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 5.8657 6.005 3 0.0012033 3654 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 59.57 46.943 51899000 0 0 0 0 3363500 4617000 5122800 3547000 3589400 6385100 4886200 4604500 4015400 3251700 8517000 41705 812 37290 347626;347627;347628;347629;347630;347631;347632;347633;347634;347635;347636 275627;275628;275629;275630;275631 275627 5 QHSSFGYGGLQGPASGLNACQYNS Unmodified 2499.0873 0.087334818 1973 P78337 PITX1 Pituitary homeobox 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.4 3.2 1 4 1 1 1 1 1 74.962 73.499 3 0.00011823 92523 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 36.394 28.682 44896000 17235000 0 0 0 0 0 5000300 0 0 0 6534200 0 4553000 0 11574000 41706 1973 37291 347637;347638;347639;347640;347641 275632;275633;275634;275635 275634 4 QHSSSINAVAWSPSGSHVVSVDK Unmodified 2378.1615 0.16148604 2849 Q676U5 ATG16L1 Autophagy-related protein 16-1 yes yes 0 0 0 By MS/MS 2 0 2 2 71.442 63.176 3;4 1.313E-10 83913 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.952 56.151 31221000 31221000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41707 2849 37292 347642;347643 275636;275637 275636 2 QHSSTSPFPTSTPLRR Unmodified 1797.9122 0.91219463 2234 Q13111 CHAF1A Chromatin assembly factor 1 subunit A yes yes 0 0 1 By MS/MS 10 0 1 1 44.36 44.411 3 0.046411 49973 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 20.737 10.27 8479000 0 0 0 0 0 8479000 0 0 0 0 0 0 0 0 0 41708 2234 37293 347644 275638 275638 1 QHSVVPSQIFELEDGTSSYK Unmodified 2250.0804 0.080441751 3567 Q8WVV9 HNRNPLL Heterogeneous nuclear ribonucleoprotein L-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 85.489 80.368 3 5.7329E-19 102149 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.968 77.493 84015000 32745000 39952000 11318000 0 0 0 0 0 0 0 0 0 0 0 0 41709 3567 37294 347645;347646;347647 275639;275640;275641 275640 3 QHTDSFQAALGSLPVDK Unmodified 1812.9006 0.90062689 3522 Q8TEX9 IPO4 Importin-4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.488 76.596 3 1.6827E-18 88343 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 73.168 67.273 103500000 0 0 0 0 4731600 13855000 6406000 8036000 5746400 12347000 7727000 9071000 8138500 7966100 19471000 41710 3522 37295 347648;347649;347650;347651;347652;347653;347654;347655;347656;347657;347658 275642;275643;275644;275645;275646;275647;275648;275649;275650 275642 9 QHTFVETESVR Unmodified 1331.647 0.64697839 1538 P48444 ARCN1 Coatomer subunit delta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32.53 31.975 3 1.0646E-05 34612 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 109.39 104.07 446980000 23025000 0 10507000 21068000 22492000 40964000 36285000 23487000 23390000 47164000 38009000 55853000 24771000 23934000 56032000 41711 1538 37296 347659;347660;347661;347662;347663;347664;347665;347666;347667;347668;347669;347670;347671;347672 275651;275652;275653;275654;275655;275656;275657;275658;275659;275660;275661;275662;275663;275664;275665;275666 275652 13 QHTILMSDK Unmodified 1071.5383 0.53827956 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS 2 0 1 1 31.064 25.345 2 0.0094421 35577 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.308 42.861 17930000 17930000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41712 5049 37297 347673 275667 275667 1 QHTTFSAESSR Unmodified 1249.5687 0.56872807 3933 Q96N67 DOCK7 Dedicator of cytokinesis protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.535 12.688 3 0.048044 11861 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 31.348 23.46 32753000 0 0 0 2046000 2215300 2500500 2964100 2728200 1194100 3550500 3754900 4161800 2577300 2108600 2951400 41713 3933 37298 347674;347675;347676;347677;347678;347679;347680;347681;347682;347683;347684;347685 275668 275668 1 QHVIDGEK Unmodified 924.46649 0.46649483 5067 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 8.3932 5.3554 2 0.0053062 7865 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 143.89 78.084 975460000 103830000 466440000 405190000 0 0 0 0 0 0 0 0 0 0 0 0 41714 5067 37299 347686;347687;347688 275669;275670;275671 275669 2 QHVPEQHPK Unmodified 1098.557 0.55704117 4387 Q9H3U1 UNC45A Protein unc-45 homolog A yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 6.3528 3.5279 2 0.011712 5483 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 84.743 58.141 150260000 109410000 0 40854000 0 0 0 0 0 0 0 0 0 0 0 0 41715 4387 37300 347689;347690 275672;275673 275673 2 QHVTEAFQFHF Unmodified 1389.6466 0.64658446 304 O43175 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS 2.67 0.471 1 2 2 1 84.836 79.822 3 0.00088909 102483 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.883 76.339 38823000 29653000 9169600 0 0 0 0 0 0 0 0 0 0 0 0 0 41716 304 37301 347691;347692;347693 275674;275675 275675 2 QHWTMTK Oxidation (M) 946.43309 0.43308621 2262 Q13263 TRIM28 Transcription intermediary factor 1-beta yes yes 0 1 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 7.1489 7.2757 2 0.046172 5133 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 50.632 32.784 41150000 0 0 0 0 2147500 3999900 3138900 0 2567000 7845300 0 4619300 6291400 5155900 5385000 41717 2262 37302 347694;347695;347696;347697;347698;347699;347700;347701;347702 275676 275676 1 QHYIDLK Unmodified 915.48142 0.48141661 1138 P22392;O60361 NME2;NME2P1 Nucleoside diphosphate kinase B;Putative nucleoside diphosphate kinase yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32.681 31.749 2 0.020013 46726 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 113.5 39.061 6686900000 1159900000 283780000 827380000 161350000 284650000 322410000 565420000 701980000 528790000 383910000 471260000 896850000 0 17719000 81551000 41718 1138 37303 347703;347704;347705;347706;347707;347708;347709;347710;347711;347712;347713;347714;347715;347716 275677;275678;275679;275680;275681;275682;275683;275684;275685;275686 275681 7 QIAEEDFYEK Unmodified 1270.5717 0.57174776 1334 P33993 MCM7 DNA replication licensing factor MCM7 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.626 48.785 2 0.0047907 53928 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.338 72.475 200670000 0 0 0 12692000 6680100 23012000 9593100 13849000 12118000 14482000 20354000 32533000 12881000 13622000 28850000 41719 1334 37304 347717;347718;347719;347720;347721;347722;347723;347724;347725;347726;347727;347728 275687;275688;275689;275690;275691;275692;275693 275690 7 QIALQDQLLK Unmodified 1168.6816 0.68157298 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.332 71.405 2 0.0019564 81981 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 110.87 59.526 277590000 0 0 0 18559000 19581000 20127000 18930000 28003000 13422000 24201000 26147000 30993000 27313000 22259000 28052000 41720 2556 37305 347729;347730;347731;347732;347733;347734;347735;347736;347737;347738;347739;347740 275694;275695;275696;275697;275698;275699;275700;275701;275702;275703;275704;275705 275699 12 QIAQLQDFVR Unmodified 1216.6564 0.65642086 2251 Q13190 STX5 Syntaxin-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 75.327 75.383 2 0.0011126 86839 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 109.71 82.584 59006000 0 0 0 3768300 2955600 5995300 4994500 5188900 3978900 6042200 6168700 7115900 0 4160200 8637500 41721 2251 37306 347741;347742;347743;347744;347745;347746;347747;347748;347749;347750;347751 275706;275707;275708;275709;275710;275711;275712;275713;275714;275715;275716;275717 275708 12 QIAQLQDFVRAK Unmodified 1415.7885 0.78849767 2251 Q13190 STX5 Syntaxin-5 yes yes 0 0 1 By MS/MS 2 0 1 1 77.506 69.376 3 0.044568 91464 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 36.952 14.623 3386500 3386500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41722 2251 37307 347752 275718 275718 1 QIASNSPGSSPK Unmodified 1171.5833 0.5833155 4288 Q9C0D5 TANC1 Protein TANC1 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.044 11.159 2 0.0031742 9674 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 74.841 52.101 40135000 0 0 0 2925300 2285500 2980800 3877400 3136700 2758400 3686000 0 5874600 3919700 4069400 4621100 41723 4288 37308 347753;347754;347755;347756;347757;347758;347759;347760;347761;347762;347763 275719;275720;275721 275720 3 QIATLHAQVADMK Unmodified 1424.7446 0.74458394 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 6 24 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 49.948 49.045 2;3 1.2067E-103 68766 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 228.12 202.01 4376400000 1129300000 16965000 123570000 83515000 148640000 281240000 162530000 167300000 168520000 348740000 347480000 508540000 260510000 221410000 408180000 41724 1356 37309 347764;347765;347766;347767;347768;347769;347770;347771;347772;347773;347774;347775;347776;347777;347778;347779;347780;347781;347782;347783;347784;347785;347786;347787;347788;347789;347790;347791;347792;347793 275722;275723;275724;275725;275726;275727;275728;275729;275730;275731;275732;275733;275734;275735;275736;275737;275738;275739;275740;275741;275742;275743;275744 275733 21 QIATLHAQVADMK Oxidation (M) 1440.7395 0.73949856 1356 P35579 MYH9 Myosin-9 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.44 3.13 4 1 20 3 2 2 2 1 2 2 2 2 1 1 2 2 1 36.867 36.082 2;3 1.0642E-54 48144 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 202.3 175.92 1972500000 0 315530000 252810000 141270000 158140000 19758000 179650000 108700000 146740000 196320000 23618000 40731000 212080000 157680000 19457000 41725 1356 37309 347794;347795;347796;347797;347798;347799;347800;347801;347802;347803;347804;347805;347806;347807;347808;347809;347810;347811;347812;347813;347814;347815;347816;347817;347818 275745;275746;275747;275748;275749;275750;275751;275752;275753;275754;275755;275756;275757;275758;275759;275760;275761;275762;275763 275748 2092 16 QIATLHAQVADMKK Unmodified 1552.8395 0.83954696 1356 P35579 MYH9 Myosin-9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.65 1.63 1 22 1 1 2 1 2 2 2 2 2 2 2 2 2 40.536 40.4 3;4 0.00094384 44948 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 33.265 25.857 336840000 10264000 0 0 9708800 18826000 6735600 26819000 24765000 6750300 33626000 34123000 70605000 25789000 18774000 50059000 41726 1356 37310 347819;347820;347821;347822;347823;347824;347825;347826;347827;347828;347829;347830;347831;347832;347833;347834;347835;347836;347837;347838;347839;347840;347841 275764;275765;275766;275767;275768;275769;275770;275771;275772;275773;275774;275775;275776;275777 275767 14 QIDAPGDPFPLNPR Unmodified 1535.7732 0.77324153 2654 Q2NL82 TSR1 Pre-rRNA-processing protein TSR1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 2 1 1 1 1 1 1 1 1 1 77.829 77.854 2 2.277E-22 89917 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 147.74 128.43 155950000 0 0 0 16059000 18047000 0 15705000 14933000 14196000 24190000 0 22141000 16974000 13710000 0 41727 2654 37311 347842;347843;347844;347845;347846;347847;347848;347849;347850;347851;347852 275778;275779;275780;275781;275782;275783;275784;275785;275786;275787;275788 275778 11 QIDAPGDPFPLNPRGIK Unmodified 1833.9737 0.97373226 2654 Q2NL82 TSR1 Pre-rRNA-processing protein TSR1 homolog yes yes 0 0 1 By MS/MS 2 0 1 1 83.771 75.64 3 9.5207E-05 98850 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.296 71.039 10752000 10752000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41728 2654 37312 347853 275789 275789 1 QIDARGGNPELVALVK Unmodified 1678.9366 0.93661847 685 O95749 GGPS1 Geranylgeranyl pyrophosphate synthase yes yes 0 0 1 By MS/MS 2 0 1 1 74.978 72.13 3 0.0098494 88020 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 53.491 42.22 11232000 0 0 11232000 0 0 0 0 0 0 0 0 0 0 0 0 41729 685 37313 347854 275790 275790 0 QIDDTMFCAGDK Oxidation (M) 1415.5697 0.56971562 5138 Q9Y337 KLK5 Kallikrein-5 yes yes 0 1 0 By MS/MS 10 0 1 1 40.767 40.262 2 0.0059106 45476 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 48.284 45.003 4390900 0 0 0 4390900 0 0 0 0 0 0 0 0 0 0 0 41730 5138 37314 347855 275791 275791 6525 1 QIDLSTVDLK Unmodified 1130.6183 0.61830402 1758 P55145 MANF Mesencephalic astrocyte-derived neurotrophic factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.17 3.85 2 1 3 1 2 1 1 1 72.879 70.263 2 0.015497 90197 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.371 37.067 155030000 5799600 113730000 0 0 0 0 0 0 0 0 8289400 8306100 0 0 18903000 41731 1758 37315 347856;347857;347858;347859;347860;347861 275792;275793;275794;275795;275796;275797 275796 5 QIDLSTVDLKK Unmodified 1258.7133 0.71326704 1758 P55145 MANF Mesencephalic astrocyte-derived neurotrophic factor yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 64.483 59.151 3 0.0052281 76088 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 49.081 28.651 27435000 0 27435000 0 0 0 0 0 0 0 0 0 0 0 0 0 41732 1758 37316 347862;347863 275798;275799 275798 1 QIDLVDNYFVK Unmodified 1352.6976 0.69761697 5052 Q9UPN9 TRIM33 E3 ubiquitin-protein ligase TRIM33 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.615 82.677 2 0.00026232 95317 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 109.29 99.509 117900000 0 0 0 2719600 4333900 10226000 5608500 7471300 6350200 11291000 8914400 13175000 9805600 11212000 26789000 41733 5052 37317 347864;347865;347866;347867;347868;347869;347870;347871;347872;347873;347874;347875 275800;275801;275802;275803;275804;275805;275806;275807;275808;275809;275810 275803 11 QIDNPDYK Unmodified 991.46108 0.4610751 1225 P27797 CALR Calreticulin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 19.08 18.711 2 0.0044578 17881 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 112.37 95.274 1425100000 0 117750000 0 93713000 73655000 48279000 79150000 87008000 58852000 89595000 171370000 124450000 112720000 97086000 271500000 41734 1225 37318 347876;347877;347878;347879;347880;347881;347882;347883;347884;347885;347886;347887;347888;347889 275811;275812;275813;275814;275815;275816;275817;275818;275819;275820;275821;275822;275823;275824 275814 12 QIDQFANEVER Unmodified 1347.6419 0.64189301 4170 Q9BUT1 BDH2 3-hydroxybutyrate dehydrogenase type 2 yes yes 0 0 0 By MS/MS 10 0 1 1 56.042 56.278 2 0.043293 63904 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 44.203 13.949 24595000 0 0 0 0 0 0 0 0 0 0 0 0 24595000 0 0 41735 4170 37319 347890 275825 275825 1 QIDQLSK Unmodified 830.44978 0.44978213 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 17.411 17.673 2 0.031648 16349 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 125.5 19.089 138250000 0 0 0 0 0 10012000 14027000 14679000 10660000 13262000 15380000 14991000 19606000 14302000 11332000 41736 2556 37320 347891;347892;347893;347894;347895;347896;347897;347898;347899;347900 275826;275827 275827 0 QIECDSEDMK Unmodified 1253.4904 0.49040267 3839 Q96FV9 THOC1 THO complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.06 19.256 2 0.0029636 19287 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 78.334 73.349 40768000 0 0 0 2045000 1761600 3182200 1534100 2001700 1422800 5188800 4617100 6990400 3852500 3362600 4809400 41737 3839 37321 347901;347902;347903;347904;347905;347906;347907;347908;347909;347910;347911;347912 275828;275829;275830;275831;275832;275833;275834;275835;275836;275837;275838;275839;275840 275838 13 QIEEENRER Unmodified 1201.5687 0.56872807 3994 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a yes yes 0 0 1 By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 6.5248 6.6692 3 0.0056292 4793 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 61.65 35.711 81094000 0 0 0 1199800 0 0 10698000 9851500 8132100 10098000 12195000 11237000 9524200 8158900 0 41738 3994 37322 347913;347914;347915;347916;347917;347918;347919;347920;347921 275841 275841 1 QIEEINEQIRK Unmodified 1398.7467 0.74669243 4021 Q99543 DNAJC2 DnaJ homolog subfamily C member 2;DnaJ homolog subfamily C member 2, N-terminally processed yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 36.175 36.635 3 0.013649 39319 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.447 16.35 24753000 0 0 0 0 0 0 0 0 0 0 4801600 0 3882300 5109200 10960000 41739 4021 37323 347922;347923;347924;347925 275842 275842 1 QIEELQQEAR Unmodified 1242.6204 0.62042929 2155 Q08378 GOLGA3 Golgin subfamily A member 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 37.547 37.554 2 0.028085 41463 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 43.769 19.739 52531000 0 0 0 6173500 2827200 9201300 5106500 5230400 5566000 0 0 0 14138000 4287800 0 41740 2155 37324 347926;347927;347928;347929;347930;347931;347932;347933 275843 275843 1 QIEEQTIK Unmodified 987.52368 0.52367535 1345 P35241 RDX Radixin yes yes 0 0 0 By MS/MS By MS/MS 2.67 0.471 1 2 1 2 24.339 20.066 2 0.024519 26246 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.191 36.469 299820000 340550 299470000 0 0 0 0 0 0 0 0 0 0 0 0 0 41741 1345 37325 347934;347935;347936 275844 275844 1 QIEEQTK Unmodified 874.43961 0.43961137 1198 P26038 MSN Moesin yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 6.0287 2.6924 2 0.03062 4684 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.467 23.291 91632000 28180000 63452000 0 0 0 0 0 0 0 0 0 0 0 0 0 41742 1198 37326 347937;347938 275845 275845 1 QIEETKPLLGGDVSAPEGTK Unmodified 2068.0688 0.068814432 3269 Q8IY22 CMIP C-Maf-inducing protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 58.796 58.821 3 0.026325 66979 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 23.873 14.215 56427000 0 0 0 8423900 5166200 0 6358200 0 0 5870800 9472700 12195000 0 8940800 0 41743 3269 37327 347939;347940;347941;347942;347943;347944;347945 275846 275846 1 QIEHQVLSSECHSK Unmodified 1680.789 0.78896795 3958 Q96QE3 ATAD5 ATPase family AAA domain-containing protein 5 yes yes 0 0 0 By MS/MS 2 0 1 1 27.796 22.407 3 0.0055543 31703 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.506 39.726 14436000 14436000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41744 3958 37328 347946 275847 275847 1 QIEHTLNEK Unmodified 1110.5669 0.56693715 1144;1056 P17612;P22694 PRKACA;PRKACB cAMP-dependent protein kinase catalytic subunit alpha;cAMP-dependent protein kinase catalytic subunit beta no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.6 3.67 3 7 1 1 1 1 1 1 1 1 1 1 14.078 13.246 2 0.0021179 17225 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.89 67.763 155540000 9886000 55090000 56539000 0 0 2725000 2223400 0 0 6338600 4522200 3796600 5123800 0 9297300 41745 1056;1144 37329 347947;347948;347949;347950;347951;347952;347953;347954;347955;347956 275848;275849;275850;275851;275852;275853;275854 275850 7 QIEILELEDLEK Unmodified 1470.7817 0.78174053 2184 Q12769 NUP160 Nuclear pore complex protein Nup160 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 88.228 88.378 2 0.00053296 102297 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.136 57.833 3882300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3882300 41746 2184 37330 347957;347958 275855;275856 275856 2 QIELACDSQEDVDSWK Unmodified 1921.8364 0.83637165 1630 P50570 DNM2 Dynamin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.709 69.784 2 1.4045E-29 80105 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 167.44 162.29 81613000 0 0 0 2693600 5413300 7236500 4900800 6281400 5222900 7582700 6537500 6541600 5854600 9577300 13771000 41747 1630 37331 347959;347960;347961;347962;347963;347964;347965;347966;347967;347968;347969;347970 275857;275858;275859;275860;275861;275862;275863;275864;275865;275866;275867;275868;275869 275867 13 QIEPSLYPK Unmodified 1073.5757 0.57571092 4425 Q9H6T3 RPAP3 RNA polymerase II-associated protein 3 yes yes 0 0 0 By MS/MS 2 0 1 1 57.023 51.201 2 0.0078483 66217 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.783 42.457 69756000 0 69756000 0 0 0 0 0 0 0 0 0 0 0 0 0 41748 4425 37332 347971 275870 275870 1 QIFNGTFVK Unmodified 1052.5655 0.56548059 1072 P18124 RPL7 60S ribosomal protein L7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.098 64.189 2 0.0051133 73489 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 83.206 44.388 145880000 0 0 0 8953300 6797200 8511600 10520000 7547700 4683300 14620000 14205000 17070000 15062000 15860000 22051000 41749 1072 37333 347972;347973;347974;347975;347976;347977;347978;347979;347980;347981;347982;347983 275871;275872;275873;275874;275875;275876;275877;275878 275877 7 QIGAFSEGINNLTHMLK Oxidation (M) 1887.9513 0.95128225 3180 Q86W92 PPFIBP1 Liprin-beta-1 yes yes 0 1 0 By matching By MS/MS 10 0 2 1 1 80.504 80.665 3 0.00012038 92951 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.634 49.636 16658000 0 0 0 0 0 0 0 0 0 3419000 0 0 0 0 13239000 41750 3180 37334 347984;347985 275879 275879 4805 1 QIGEGQVSLESGAGSGR Unmodified 1630.7911 0.79107644 1627 P50542 PEX5 Peroxisomal targeting signal 1 receptor yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 45.959 46.181 2 1.1914E-09 50964 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 86.028 61.684 41044000 0 0 0 0 2063100 4920000 3641300 3548600 0 5273300 0 6265900 4331500 4093900 6906000 41751 1627 37335 347986;347987;347988;347989;347990;347991;347992;347993;347994;347995 275880;275881;275882;275883;275884;275885 275884 6 QIGENLIVPGGVK Unmodified 1322.7558 0.75580056 2613 Q16555;Q14194 DPYSL2;CRMP1 Dihydropyrimidinase-related protein 2;Dihydropyrimidinase-related protein 1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 73.911 72.762 2 7.8518E-10 91419 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.42 87.595 904360000 35501000 737790000 14891000 6084800 4598200 6895500 4961500 5653600 3833200 5986900 14493000 15082000 5389800 12421000 30778000 41752 2613 37336 347996;347997;347998;347999;348000;348001;348002;348003;348004;348005;348006;348007;348008;348009;348010;348011 275886;275887;275888;275889;275890;275891;275892;275893;275894;275895;275896;275897;275898;275899;275900;275901;275902 275890 17 QIGIDPPRGVLMYGPPGCGK Oxidation (M) 2127.0605 0.060515127 1482 P43686 PSMC4 26S protease regulatory subunit 6B yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By matching By matching 10 0 5 1 1 1 1 1 76.446 76.512 3 0.0001999 88267 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 46.159 35.501 56378000 0 0 0 4007800 0 0 0 0 0 0 16254000 25684000 0 3209000 7223900 41753 1482 37337 348012;348013;348014;348015;348016 275903;275904 275903 2327 2 QIGNVAALPGIVHR Unmodified 1443.831 0.83103118 5168 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 71.807 71.867 3 1.3722E-12 82617 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 104.59 92.447 516130000 0 0 0 28573000 28211000 54767000 38646000 42502000 37329000 56254000 46405000 58057000 28855000 0 96532000 41754 5168 37338 348017;348018;348019;348020;348021;348022;348023;348024;348025;348026;348027 275905;275906;275907;275908;275909;275910;275911;275912;275913;275914;275915 275910 7 QIGTLLAELR Unmodified 1112.6554 0.65535823 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 82.853 82.963 2 0.010972 95599 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.064 23.76 13856000 0 0 0 0 0 2486000 0 0 0 3066300 0 0 0 0 8303500 41755 3119 37339 348028;348029;348030 275916 275916 1 QIHQIAQK Unmodified 964.54541 0.54541385 265 O15226 NKRF NF-kappa-B-repressing factor yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 10.988 7.8947 2 0.010276 12387 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 113.1 28.403 19816000 17295000 0 2520900 0 0 0 0 0 0 0 0 0 0 0 0 41756 265 37340 348031;348032 275917 275917 1 QIHQQLYDR Unmodified 1199.6047 0.60471964 4152 Q9BTW9 TBCD Tubulin-specific chaperone D yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 21.494 21.695 3 0.006088 22780 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 56.013 35.156 80950000 0 0 0 3956100 3345000 13405000 3865300 0 0 14190000 10351000 8684100 0 8132200 15020000 41757 4152 37341 348033;348034;348035;348036;348037;348038;348039;348040;348041 275918;275919 275918 2 QIIGPFQR Unmodified 957.5396 0.53960019 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 56.364 56.483 2 0.014173 63242 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 70.912 39.623 74509000 0 0 0 4993600 4366100 6436300 4528900 5957400 0 0 9096900 10828000 10152000 6998600 11151000 41758 2431 37342 348042;348043;348044;348045;348046;348047;348048;348049;348050;348051 275920;275921 275920 2 QIILLEQSYQK Unmodified 1361.7555 0.7554662 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.602 71.674 2 2.0272E-05 82187 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 142.92 116.25 166400000 0 0 0 9571000 11011000 12543000 13338000 12244000 10931000 16957000 17576000 27301000 11064000 10861000 13006000 41759 3023 37343 348052;348053;348054;348055;348056;348057;348058;348059;348060;348061;348062;348063 275922;275923;275924;275925;275926;275927;275928;275929;275930;275931;275932;275933;275934;275935 275932 14 QIISHSSK Unmodified 898.48723 0.48723027 2484 Q15042 RAB3GAP1 Rab3 GTPase-activating protein catalytic subunit yes yes 0 0 0 By matching By MS/MS By MS/MS 2 0 3 1 1 1 7.1957 4.2038 2 0.028775 6010 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 77.318 51.867 130640000 85638000 12557000 32442000 0 0 0 0 0 0 0 0 0 0 0 0 41760 2484 37344 348064;348065;348066 275936 275936 1 QIITDKDDLVK Unmodified 1286.7082 0.70818166 3434 Q8NEZ2 VPS37A Vacuolar protein sorting-associated protein 37A yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 42.801 42.972 3 0.044037 47437 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 26.969 13.566 104750000 0 0 0 10654000 8107200 0 10441000 11246000 3139800 8397400 15808000 15044000 0 7369900 14546000 41761 3434 37345 348067;348068;348069;348070;348071;348072;348073;348074;348075;348076 275937 275937 1 QIIVDPLSFSEER Unmodified 1531.7882 0.7882229 1340 P35221 CTNNA1 Catenin alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 85.116 85.182 2 4.8885E-20 97824 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 156.48 129.88 311510000 0 0 0 12504000 21357000 29666000 19072000 24594000 19933000 41292000 20909000 33312000 20818000 21238000 46818000 41762 1340 37346 348077;348078;348079;348080;348081;348082;348083;348084;348085;348086;348087;348088 275938;275939;275940;275941;275942;275943;275944;275945;275946;275947;275948;275949;275950;275951;275952;275953;275954 275947 17 QIIVNLLGSK Unmodified 1083.6652 0.66519463 327 O43426 SYNJ1 Synaptojanin-1 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 78.875 78.772 2 0.017268 90564 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.06 25.292 4548200 0 0 0 1021300 0 0 0 0 0 0 0 0 0 0 3526900 41763 327 37347 348089;348090 275955 275955 1 QILDEAGK Unmodified 872.46035 0.46034682 1073 P18206 VCL Vinculin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 23.862 24.078 2 0.015495 24821 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 68.787 10.976 173020000 0 0 0 14108000 0 18548000 9577800 0 5586400 16812000 28309000 0 11670000 22265000 46144000 41764 1073 37348 348091;348092;348093;348094;348095;348096;348097;348098;348099 275956;275957 275957 2 QILDSAASLTGSK Unmodified 1289.6827 0.68269519 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 58.617 58.269 2 0.0031415 65936 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 65.395 27.102 167640000 0 55214000 0 5995600 5508900 7024400 8161900 5620400 4756900 11983000 13084000 16640000 7886500 9428900 16331000 41765 1492 37349 348100;348101;348102;348103;348104;348105;348106;348107;348108;348109;348110;348111;348112 275958;275959;275960;275961;275962;275963;275964 275963 6 QILEILNSTGVEYETFDILEDEEVRQGLK Unmodified 3379.7035 0.7034968 570 O76003 GLRX3 Glutaredoxin-3 yes yes 0 0 1 By MS/MS 2 0 1 1 103.47 95.338 3 7.1401E-22 122496 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.341 70.825 16491000 16491000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41766 570 37350 348113 275965 275965 1 QILENELQIPVSK Unmodified 1509.8403 0.84025847 5037 Q9UNN5 FAF1 FAS-associated factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 78.811 77.781 2 7.0865E-74 89396 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 212.2 187.07 738150000 7822300 421480000 0 15526000 17199000 37739000 22613000 17581000 14101000 36078000 34726000 31524000 18879000 25155000 37729000 41767 5037 37351 348114;348115;348116;348117;348118;348119;348120;348121;348122;348123;348124;348125;348126;348127;348128 275966;275967;275968;275969;275970;275971;275972;275973;275974;275975;275976;275977;275978;275979;275980;275981 275976 15 QILGSSSSGK Unmodified 962.50327 0.50327426 3056 Q7L7V1 DHX32 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 yes yes 0 0 0 By MS/MS 2 0 1 1 16.321 12.947 2 0.037524 17351 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 56.013 39.466 12113000 0 12113000 0 0 0 0 0 0 0 0 0 0 0 0 0 41768 3056 37352 348129 275982;275983 275983 2 QILGVIDK Unmodified 884.53312 0.53311783 2407 Q14444 CAPRIN1 Caprin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.21 2.31 1 1 17 2 1 1 2 2 1 1 1 1 2 1 2 2 55.875 55.481 2 0.0068621 63222 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 93.429 42.725 1781800000 0 218940000 0 123460000 117600000 130140000 124160000 96182000 100550000 161180000 162940000 170400000 106140000 104970000 165120000 41769 2407 37353 348130;348131;348132;348133;348134;348135;348136;348137;348138;348139;348140;348141;348142;348143;348144;348145;348146;348147;348148 275984;275985;275986;275987;275988;275989;275990;275991;275992;275993;275994 275984 10 QILIAEFQR Unmodified 1116.6291 0.62914348 1784 P56524 HDAC4 Histone deacetylase 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 74.59 74.623 2 0.013016 85933 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 60.436 32.262 51691000 0 0 0 4135000 4874900 7320100 4995300 4442500 0 5707200 0 5874200 0 5364500 8977700 41770 1784 37354 348149;348150;348151;348152;348153;348154;348155;348156;348157 275995;275996;275997;275998 275995 4 QILLYSATFPLSVQK Unmodified 1706.9607 0.96070795 1199 P26196 DDX6 Probable ATP-dependent RNA helicase DDX6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 90.269 90.414 2 3.9759E-07 104742 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.441 82.147 22681000 0 0 0 0 0 1937200 0 2520200 2083100 4238900 2410800 3120100 0 0 6370300 41771 1199 37355 348158;348159;348160;348161;348162;348163;348164 275999;276000;276001;276002;276003 276001 5 QILNDQLK Unmodified 970.54475 0.54474515 2581 Q15811;CON__ENSEMBL:ENSBTAP00000001528 ITSN1 Intersectin-1 yes no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 40.097 39.707 2 0.0099856 44358 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 81.119 22.3 + 64589000 0 31858000 0 0 0 3906300 4211300 0 0 4876900 3608200 0 3817100 3481600 8829200 41772 2581 37356 348165;348166;348167;348168;348169;348170;348171;348172 276004;276005;276006;276007 276004 4 QILSADDK Unmodified 888.45526 0.45526144 5167 Q9Y3F4 STRAP Serine-threonine kinase receptor-associated protein yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21.459 20.773 2 0.012585 20507 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.301 29.58 1319900000 43135000 1043100000 4645700 9714000 5892500 8255500 0 9590400 7049600 14880000 36246000 34112000 17445000 31387000 54524000 41773 5167 37357 348173;348174;348175;348176;348177;348178;348179;348180;348181;348182;348183;348184;348185;348186 276008;276009;276010;276011 276009 4 QILSAPLPR Unmodified 993.59712 0.59711507 5041 Q9UNS1 TIMELESS Protein timeless homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62 62.099 2 0.0071238 71079 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 73.26 51.578 69684000 0 0 0 3836600 4697000 6375600 5122800 4757700 3756900 7623400 7485400 7303700 6547300 4875500 7302500 41774 5041 37358 348187;348188;348189;348190;348191;348192;348193;348194;348195;348196;348197;348198 276012;276013;276014;276015;276016;276017 276012 6 QILSLNYDDSTAAGRK Unmodified 1750.885 0.88497683 2183 Q12768 KIAA0196 WASH complex subunit strumpellin yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 2 59.44 58.709 3 0.00056705 66609 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 50.079 40.157 71220000 6701700 0 3672700 3589600 1893700 4411400 3134000 3517200 0 6045000 5479700 5026600 5425900 4888000 17435000 41775 2183 37359 348199;348200;348201;348202;348203;348204;348205;348206;348207;348208;348209;348210;348211;348212 276018;276019;276020;276021;276022;276023;276024;276025 276020 8 QILSNPK Unmodified 798.45995 0.45995289 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 1 2 2 2 2 2 2 1 1 1 19.779 20.017 1;2 0.013821 20197 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 176.66 95.281 3525800000 0 0 0 6849200 9688600 0 198010000 258320000 197130000 662420000 835490000 1331200000 4110700 5904600 16693000 41776 4226 37360 348213;348214;348215;348216;348217;348218;348219;348220;348221;348222;348223;348224;348225;348226;348227;348228;348229 276026;276027;276028 276028 2 QILVGDIGDTVEDPYTSFVK Unmodified 2195.0998 0.099780209 5088 Q9Y281 CFL2 Cofilin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 3.29 2.76 5 1 1 4 2 1 94.468 91.216 2;3 6.4122E-287 110814 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 263.56 254.51 407710000 0 400470000 5725800 0 0 0 0 0 0 0 0 0 0 0 1517200 41777 5088 37361 348230;348231;348232;348233;348234;348235;348236 276029;276030;276031;276032;276033;276034 276029 6 QINDFISQK Unmodified 1091.5611 0.56112349 3236 Q8IW75 SERPINA12 Serpin A12 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 48.662 48.602 2 0.01435 55639 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 58.426 39.735 65006000 0 0 0 23949000 5135000 0 5346800 17587000 0 0 0 0 7676600 5311600 0 41778 3236 37362 348237;348238;348239;348240;348241;348242 276035;276036 276035 2 QINDIQLSR Unmodified 1085.5829 0.58292157 2273 Q13347 EIF3I Eukaryotic translation initiation factor 3 subunit I yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 43.698 43.884 2 0.0025731 48073 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 138.4 27.228 310800000 0 0 0 22591000 14158000 0 18378000 17072000 17449000 35151000 37209000 45126000 28106000 23237000 52326000 41779 2273 37363 348243;348244;348245;348246;348247;348248;348249;348250;348251;348252;348253 276037;276038;276039;276040;276041;276042;276043;276044;276045;276046;276047;276048;276049;276050 276041 13 QININNPFVFK Unmodified 1332.719 0.71902112 4963 Q9UKF6 CPSF3 Cleavage and polyadenylation specificity factor subunit 3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 84.171 84.187 2 0.0013786 97433 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 73.157 53.016 330430000 0 0 0 12082000 23450000 36814000 30369000 63101000 40444000 0 0 124170000 0 0 0 41780 4963 37364 348254;348255;348256;348257;348258;348259;348260;348261 276051;276052;276053;276054 276051 4 QINLSNIR Unmodified 956.54033 0.54032847 3039 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 50.511 50.842 2 3.6798E-07 57598 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 158.36 82.322 233990000 0 0 0 0 0 29203000 20593000 15104000 0 25338000 42374000 43122000 0 0 58255000 41781 3039 37365 348262;348263;348264;348265;348266;348267;348268;348269;348270;348271 276055;276056;276057;276058;276059;276060;276061;276062;276063 276055 8 QINQEYLISQVEGHQVSLK Unmodified 2212.1488 0.14879609 5156 Q9Y3C4 TPRKB EKC/KEOPS complex subunit TPRKB yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 85.569 80.453 3 2.4313E-31 101374 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.84 97.601 51919000 8677500 40866000 2375800 0 0 0 0 0 0 0 0 0 0 0 0 41782 5156 37366 348272;348273;348274 276064;276065;276066;276067 276064 4 QINVSTDDSEVK Unmodified 1333.6361 0.63613893 303 O43172 PRPF4 U4/U6 small nuclear ribonucleoprotein Prp4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.748 33.931 2 1.2221E-10 37153 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 146.11 135.65 482360000 0 0 0 24942000 31323000 31025000 32225000 29700000 20972000 40778000 75478000 66344000 37400000 35740000 56432000 41783 303 37367 348275;348276;348277;348278;348279;348280;348281;348282;348283;348284;348285;348286 276068;276069;276070;276071;276072;276073;276074;276075;276076 276074 7 QINWTVLYR Unmodified 1191.64 0.64004252 2006 P83731 RPL24 60S ribosomal protein L24 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 81.366 81.47 2 0.003176 94287 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 103.83 96.938 126230000 0 0 0 0 5538900 10982000 5767100 10999000 11468000 18862000 8584900 14416000 5835800 6682400 27091000 41784 2006 37368 348287;348288;348289;348290;348291;348292;348293;348294;348295;348296;348297 276077;276078;276079;276080;276081;276082;276083;276084 276078 8 QIPAITCIQSQWR Unmodified 1599.8191 0.81914587 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 81.592 81.651 2 0.00075728 93962 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 81.475 71.987 44025000 0 0 0 0 3486600 6937500 0 0 3887200 6216700 0 0 0 3196200 20301000 41785 1518 37369 348298;348299;348300;348301;348302;348303;348304;348305;348306 276085;276086;276087;276088;276089;276090;276091;276092;276093;276094;276095 276091 11 QIPFPSGTPLHANSMVSENVIQSTAVTTVSSGTK Oxidation (M) 3500.7457 0.74571274 2205 Q12904 AIMP1 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1;Endothelial monocyte-activating polypeptide 2 yes yes 0 1 0 By MS/MS 2 0 1 1 88.591 80.46 3 1.7001E-33 104647 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.519 71.461 13997000 13997000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41786 2205 37370 348307 276096;276097 276096 3587 2 QIPFPSGTPLHANSMVSENVIQSTAVTTVSSGTK Unmodified 3484.7508 0.75079812 2205 Q12904 AIMP1 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1;Endothelial monocyte-activating polypeptide 2 yes yes 0 0 0 By MS/MS 2 0 1 1 91.679 83.549 3 3.0275E-10 108363 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.831 43.672 12050000 12050000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41787 2205 37370 348308 276098 276098 1 QIPQATASMK Oxidation (M) 1089.5488 0.54884425 304 O43175 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 1 2 3 2 2 2 2 2 2 17.256 17.445 2 0.0010931 15821 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 89.542 52.554 419620000 0 0 0 25332000 20493000 49573000 15503000 22515000 17335000 41651000 38489000 64923000 45182000 31751000 46870000 41788 304 37371 348309;348310;348311;348312;348313;348314;348315;348316;348317;348318;348319;348320;348321;348322;348323;348324;348325;348326;348327;348328;348329;348330;348331;348332 276099;276100;276101;276102;276103;276104;276105;276106;276107;276108;276109;276110;276111;276112;276113;276114;276115 276110 392 14 QIPQATASMK Unmodified 1073.5539 0.55392962 304 O43175 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.954 31.144 2 0.0019383 32785 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 99.442 51.593 648760000 0 0 0 30876000 35905000 86465000 37612000 42897000 26456000 68941000 73501000 58875000 45526000 45460000 96243000 41789 304 37371 348333;348334;348335;348336;348337;348338;348339;348340;348341;348342;348343;348344 276116;276117;276118;276119;276120;276121;276122;276123;276124;276125;276126;276127;276128 276120 12 QIPVESVPGIR Unmodified 1193.6768 0.67682195 3668 Q92830 KAT2A Histone acetyltransferase KAT2A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 67.452 67.483 2 0.0077188 77852 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 53.327 32.457 46396000 0 0 0 4835700 5636200 0 0 4892100 0 7621700 0 15003000 4746600 0 3660400 41790 3668 37372 348345;348346;348347;348348;348349;348350;348351;348352 276129;276130;276131;276132;276133 276133 5 QIQDMLGLTK Unmodified 1145.6114 0.6114445 2537 Q15437 SEC23B Protein transport protein Sec23B yes yes 0 0 0 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 71.811 72.021 2 0.0054644 82855 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.846 33.645 11403000 0 0 0 0 0 0 0 0 1684800 0 0 0 1960700 1849300 5908200 41791 2537 37373 348353;348354;348355;348356 276134 276134 1 QIQDQLNELEER Unmodified 1513.7372 0.73724996 3618 Q92541 RTF1 RNA polymerase-associated protein RTF1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 62.738 62.917 2 6.8336E-09 72090 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 123.79 89.406 3082700 0 0 0 0 0 0 0 3082700 0 0 0 0 0 0 0 41792 3618 37374 348357;348358;348359;348360;348361;348362;348363;348364;348365 276135;276136;276137;276138;276139;276140;276141;276142;276143 276135 9 QIQEAYGK Unmodified 935.47125 0.47124585 5035 Q9UNL4 ING4 Inhibitor of growth protein 4 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 8 3.46 1 3 1 1 1 1 15.993 15.425 2 0.01518 18799 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.407 33.608 24802000 0 9907000 0 0 0 0 0 0 0 2379300 7046900 5469100 0 0 0 41793 5035 37375 348366;348367;348368;348369 276144;276145;276146 276145 2 QIQEEEDEK Unmodified 1146.5041 0.50406212 368 O43805 SSNA1 Sjoegren syndrome nuclear autoantigen 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 2 1 1 8.4142 8.5639 2 0.029817 7128 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.177 36.657 14353000 0 0 0 0 750810 0 1347400 1121600 789690 0 0 6577900 0 1628700 2136700 41794 368 37376 348370;348371;348372;348373;348374;348375;348376;348377 276147;276148 276148 2 QIQEEITGNTEALSGR Unmodified 1744.8592 0.85915601 4665 Q9NVD7 PARVA Alpha-parvin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 58.533 58.558 2 7.6277E-06 66551 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 96.103 53.36 46481000 0 0 0 4155100 3061800 6313600 4579300 3861000 0 6418600 0 6693900 6557500 4839700 0 41795 4665 37377 348378;348379;348380;348381;348382;348383;348384;348385;348386 276149;276150;276151;276152;276153;276154;276155;276156 276151 8 QIQEEITGNTEALSGRHER Unmodified 2167.0618 0.061771994 4665 Q9NVD7 PARVA Alpha-parvin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 2 1 1 2 2 2 1 1 2 46.749 47.099 3;4 2.9996E-07 53070 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 64.2 60.865 156640000 0 0 0 0 0 18779000 7128700 8810200 5982200 18419000 21647000 29606000 9920700 7057500 29288000 41796 4665 37378 348387;348388;348389;348390;348391;348392;348393;348394;348395;348396;348397;348398;348399;348400;348401 276157;276158;276159;276160;276161;276162;276163;276164;276165;276166;276167;276168;276169 276157 9 QIQEERDER Unmodified 1201.5687 0.56872807 244 O15042 U2SURP U2 snRNP-associated SURP motif-containing protein yes yes 0 0 1 By MS/MS 10 0 1 1 6.3923 6.7204 3 0.0090404 3937 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.683 18.459 9581000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9581000 41797 244 37379 348402 276170 276170 1 QIQFADDMQEFTK Oxidation (M) 1615.7188 0.7188227 377 O43865 AHCYL1 Putative adenosylhomocysteinase 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.58 1.79 1 18 1 2 1 2 2 2 2 2 1 1 2 1 62.18 61.905 2 4.5591E-08 70578 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 99.343 73.684 239890000 0 141750000 0 8531600 7110900 13823000 9937000 8129100 7378900 13864000 6435600 6784400 12648000 3499600 0 41798 377 37380 348403;348404;348405;348406;348407;348408;348409;348410;348411;348412;348413;348414;348415;348416;348417;348418;348419;348420;348421 276171;276172;276173;276174;276175;276176;276177;276178;276179;276180;276181;276182;276183;276184;276185 276182 481 15 QIQFADDMQEFTK Unmodified 1599.7239 0.72390808 377 O43865 AHCYL1 Putative adenosylhomocysteinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 82.117 77.451 2 8.9976E-34 97013 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 175.15 168.13 351990000 6411800 343050000 2530100 0 0 0 0 0 0 0 0 0 0 0 0 41799 377 37380 348422;348423;348424;348425 276186;276187;276188;276189 276186 4 QIQGTETEFNSLVK Unmodified 1592.8046 0.80460124 4821 Q9P2K8 EIF2AK4 Eukaryotic translation initiation factor 2-alpha kinase 4 yes yes 0 0 0 By MS/MS 2 0 1 1 74.908 69.753 2 7.7868E-39 87597 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 162.38 153.62 47129000 0 47129000 0 0 0 0 0 0 0 0 0 0 0 0 0 41800 4821 37381 348426 276190 276190 1 QIQLAQK Unmodified 827.4865 0.48650199 230 O14964 HGS Hepatocyte growth factor-regulated tyrosine kinase substrate yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 21.692 21.869 2 0.023354 23095 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 89.703 34.939 88408000 0 0 0 6726000 6147200 7323900 5026300 8576700 4341700 9421400 0 13706000 6288300 6837400 14013000 41801 230 37382 348427;348428;348429;348430;348431;348432;348433;348434;348435;348436;348437 276191;276192;276193;276194;276195;276196;276197;276198 276197 8 QIQNLQK Unmodified 870.49232 0.49231565 927 P10644 PRKAR1A cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 14.129 13.848 2 0.023611 12548 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 101.47 41.067 563680000 0 454050000 0 0 12714000 18349000 0 10210000 7251000 22814000 0 16005000 0 0 22287000 41802 927 37383 348438;348439;348440;348441;348442;348443;348444;348445 276199;276200;276201;276202;276203 276201 4 QIQPFQVLTTR Unmodified 1329.7405 0.74048484 1081 P18858 LIG1 DNA ligase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 79.152 79.22 2 2.1517E-05 91493 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 123.35 51.975 69409000 0 0 0 5024900 0 9927500 5927200 6091000 0 11997000 8761800 0 11019000 0 10660000 41803 1081 37384 348446;348447;348448;348449;348450;348451;348452;348453;348454;348455 276204;276205;276206;276207;276208;276209;276210;276211;276212;276213 276204 9 QIQPFQVLTTRK Unmodified 1457.8354 0.83544786 1081 P18858 LIG1 DNA ligase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 69.773 70.02 3 0.0064304 80200 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 40.725 33.114 52774000 0 0 0 0 0 0 0 5309400 0 7356500 6259200 9726000 6059300 5212200 12852000 41804 1081 37385 348456;348457;348458;348459;348460;348461;348462 276214;276215;276216;276217;276218;276219 276218 6 QIQQELEQCDVPEDVR Unmodified 1984.916 0.91601896 5010 Q9ULX3 NOB1 RNA-binding protein NOB1 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching 10 0 15 1 2 1 2 1 2 1 2 2 1 62.435 62.477 2;3 1.4094E-07 71890 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 87.618 73.712 64689000 0 0 0 3004100 4702300 3041000 7481600 2854300 0 10216000 2943800 0 12733000 11421000 6291200 41805 5010 37386 348463;348464;348465;348466;348467;348468;348469;348470;348471;348472;348473;348474;348475;348476;348477 276220;276221;276222 276221 3 QIQQLESNNRDLQDK Unmodified 1827.9075 0.90750318 455 O75116 ROCK2 Rho-associated protein kinase 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34.394 33.46 3 4.3751E-16 43545 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.08 99.759 116900000 6386200 27893000 4005200 4356400 3291500 6899500 4385700 4496400 3783500 8280000 12526000 11817000 9072700 0 9707200 41806 455 37387 348478;348479;348480;348481;348482;348483;348484;348485;348486;348487;348488;348489;348490;348491 276223;276224;276225;276226;276227;276228;276229;276230;276231;276232;276233;276234 276226 12 QIQQYMK Unmodified 937.46914 0.46913736 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.6 3.67 3 7 1 1 1 1 1 1 1 1 1 1 28.723 27.53 2 0.011424 36072 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.16 54.442 955290000 24215000 761140000 4445900 0 2835900 6813200 0 9285000 0 15689000 20615000 54488000 0 0 55760000 41807 1337 37388 348492;348493;348494;348495;348496;348497;348498;348499;348500;348501 276235;276236;276237;276238;276239;276240 276236 6 QIQQYMK Oxidation (M) 953.46405 0.46405199 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 1 0 By MS/MS 2 0 1 1 14.307 10.259 2 0.052644 15454 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.25 45.561 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41808 1337 37388 348502 276241 276241 1 QIQTEAAQLLTSFSEK Unmodified 1792.9207 0.92069363 3793 Q96DB5 RMDN1 Regulator of microtubule dynamics protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 92.346 88.661 3 8.7059E-24 110116 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.72 111.19 34966000 0 34313000 652820 0 0 0 0 0 0 0 0 0 0 0 0 41809 3793 37389 348503;348504 276242 276242 1 QIQVNDEDVR Unmodified 1214.5891 0.58912916 4989 Q9ULC3 RAB23 Ras-related protein Rab-23 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 33.09 33.327 2 0.039039 36559 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 40.352 14.793 6023400 0 0 0 0 0 0 0 2026800 0 0 0 0 0 3996600 0 41810 4989 37390 348505;348506 276243 276243 1 QIREPVDLQK Unmodified 1224.6826 0.68263561 5074 Q9UQR1 ZNF148 Zinc finger protein 148 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.3 2.25 2 21 1 1 2 2 2 2 2 2 1 1 1 2 2 2 37.693 37.363 2;3 0.00040047 47957 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 98.048 32.743 648960000 96390000 0 42757000 51600000 70298000 59716000 47703000 38009000 40277000 4510800 4925500 6343500 40335000 49697000 96394000 41811 5074 37391 348507;348508;348509;348510;348511;348512;348513;348514;348515;348516;348517;348518;348519;348520;348521;348522;348523;348524;348525;348526;348527;348528;348529 276244;276245;276246;276247;276248;276249;276250;276251;276252 276249 6 QIRHESGASIK Unmodified 1224.6575 0.65748349 1868 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.41 3.11 4 2 23 3 3 2 2 2 2 2 1 2 2 2 2 2 2 7.6709 7.0265 2;3 0.00037792 11499 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.344 53.93 6819800000 4563100000 71755000 0 92743000 72076000 173920000 128910000 111320000 101420000 288690000 316920000 179430000 178980000 150530000 390030000 41812 1868 37392 348530;348531;348532;348533;348534;348535;348536;348537;348538;348539;348540;348541;348542;348543;348544;348545;348546;348547;348548;348549;348550;348551;348552;348553;348554;348555;348556;348557;348558 276253;276254;276255;276256;276257;276258;276259;276260;276261;276262;276263;276264;276265;276266 276258 8 QISALEDDLAQTK Unmodified 1430.7253 0.72528829 4729 Q9NXR1 NDE1 Nuclear distribution protein nudE homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 63.353 63.472 2 0.00062129 72872 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 94.465 33.824 44477000 0 0 0 0 5139600 0 6979400 8360700 4497000 5119200 0 0 6500300 0 7880800 41813 4729 37393 348559;348560;348561;348562;348563;348564;348565;348566 276267;276268;276269;276270;276271;276272;276273;276274 276273 8 QISDGEREELNLTANR Unmodified 1843.9024 0.90241781 693 O95816 BAG2 BAG family molecular chaperone regulator 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 48.374 48.611 3 1.0921E-10 53793 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.141 65.348 252070000 0 0 0 0 15176000 29254000 10846000 0 13818000 16532000 26983000 32514000 11289000 30553000 65101000 41814 693 37394 348567;348568;348569;348570;348571;348572;348573;348574;348575;348576 276275;276276;276277;276278;276279;276280;276281;276282;276283 276278 9 QISDVERDVQNFPAATDEK Unmodified 2161.0287 0.028740531 417 O60610 DIAPH1 Protein diaphanous homolog 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 69.333 68.049 3 2.6293E-84 85916 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 146.1 133.25 385330000 15023000 83673000 6761800 13338000 14399000 32903000 18809000 16614000 19094000 47451000 24940000 27532000 17107000 22097000 25591000 41815 417 37395 348577;348578;348579;348580;348581;348582;348583;348584;348585;348586;348587;348588;348589;348590;348591;348592 276284;276285;276286;276287;276288;276289;276290;276291;276292;276293;276294;276295;276296;276297;276298;276299;276300;276301;276302;276303;276304;276305 276288 22 QISGQYSGSPQLLK Unmodified 1504.7886 0.78855725 3933 Q96N67 DOCK7 Dedicator of cytokinesis protein 7 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 56.695 56.359 2 4.5185E-18 72084 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.86 86.669 146420000 0 32349000 0 9967800 8000300 8531700 7512300 12048000 5558800 10358000 8700200 14120000 10962000 8388500 9923700 41816 3933 37396 348593;348594;348595;348596;348597;348598;348599;348600;348601;348602;348603;348604;348605 276306;276307;276308;276309;276310;276311;276312;276313;276314;276315 276308 5 QISLPDLSQEEPQLK Unmodified 1723.8992 0.89922991 2526 Q15390 MTFR1 Mitochondrial fission regulator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 81.397 81.552 2 1.6272E-06 94556 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 84.479 67.847 35506000 0 0 0 0 0 0 2801600 3648600 2673000 6479900 4119300 4733500 2698300 2779000 5572400 41817 2526 37397 348606;348607;348608;348609;348610;348611;348612;348613;348614;348615 276316;276317;276318;276319;276320;276321;276322;276323;276324 276323 9 QISNEVDSEDLK Unmodified 1375.6467 0.64670362 3436 Q8NEZ4 KMT2C Histone-lysine N-methyltransferase 2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 38.439 38.823 2 0.013873 43113 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 70.942 37.679 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41818 3436 37398 348616;348617;348618 276325;276326;276327 276325 3 QISNLQQSISDAEQR Unmodified 1715.8438 0.84384029 780 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 41 4 4 3 3 5 3 4 3 3 4 3 2 65.513 65.571 2;3 0 68911 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 331.25 307 + 19608000000 0 0 0 3769200000 842270000 1345300000 728170000 3325300000 546150000 1851200000 1118500000 2776500000 1750500000 902650000 651880000 41819 780 37399 348619;348620;348621;348622;348623;348624;348625;348626;348627;348628;348629;348630;348631;348632;348633;348634;348635;348636;348637;348638;348639;348640;348641;348642;348643;348644;348645;348646;348647;348648;348649;348650;348651;348652;348653;348654;348655;348656;348657;348658;348659 276328;276329;276330;276331;276332;276333;276334;276335;276336;276337;276338;276339;276340;276341;276342;276343;276344;276345;276346;276347;276348;276349;276350;276351;276352;276353;276354;276355;276356;276357;276358;276359;276360;276361;276362;276363;276364;276365;276366;276367;276368 276361 32 QISNLQQSISDAEQRGENALK Unmodified 2328.167 0.16696535 780 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.66 2.96 5 1 29 2 3 1 3 1 2 1 3 3 3 3 2 2 3 3 73.342 72.895 2;3 5.3794E-178 90282 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 224.99 181.83 + 4621700000 37520000 496810000 45300000 474080000 54608000 146550000 31466000 467290000 163820000 1229800000 317490000 198010000 63937000 110300000 784720000 41820 780 37400 348660;348661;348662;348663;348664;348665;348666;348667;348668;348669;348670;348671;348672;348673;348674;348675;348676;348677;348678;348679;348680;348681;348682;348683;348684;348685;348686;348687;348688;348689;348690;348691;348692;348693;348694 276369;276370;276371;276372;276373;276374;276375;276376;276377;276378;276379;276380;276381;276382;276383;276384;276385;276386;276387;276388;276389;276390;276391;276392;276393;276394;276395;276396;276397;276398 276387 28 QISPQEFIHELK Unmodified 1467.7722 0.7721789 4630 Q9NSV4 DIAPH3 Protein diaphanous homolog 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.829 79.932 3 0.00033248 92043 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.324 71.442 112580000 0 0 0 0 2994900 14078000 3864000 10070000 8307900 10265000 9575600 11887000 6662100 7743300 27135000 41821 4630 37401 348695;348696;348697;348698;348699;348700;348701;348702;348703;348704;348705 276399;276400;276401;276402;276403;276404;276405;276406 276401 8 QISQAYEVLSDAK Unmodified 1450.7304 0.73037367 1303 P31689 DNAJA1 DnaJ homolog subfamily A member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 67.518 66.194 2 1.2749E-19 75072 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 153.95 124.28 1273100000 11834000 767190000 5371500 19952000 22060000 34245000 32422000 23227000 25243000 36742000 63322000 66645000 37488000 44122000 83255000 41822 1303 37402 348706;348707;348708;348709;348710;348711;348712;348713;348714;348715;348716;348717;348718;348719;348720;348721 276407;276408;276409;276410;276411;276412;276413;276414;276415;276416;276417;276418;276419;276420;276421;276422;276423;276424 276412 18 QISRSSGEQQNK Unmodified 1360.6695 0.66950474 4872 Q9UER7 DAXX Death domain-associated protein 6 yes yes 0 0 1 By MS/MS 2 0 1 1 5.8262 2.4487 2 4.4671E-53 5360 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 225.01 126.01 33704000 33704000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41823 4872 37403 348722 276425 276425 1 QISSFMSEISDEFK Oxidation (M) 1662.7447 0.7447031 5267 Q9Y678 COPG1 Coatomer subunit gamma-1 yes yes 0 1 0 By matching By MS/MS By matching 10 0 3 1 1 1 78.003 78.187 2 0.002862 90364 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 45.879 32.923 13036000 0 0 0 0 0 0 0 2840600 0 6405500 0 0 0 0 3790400 41824 5267 37404 348723;348724;348725 276426 276426 6670 1 QISSFMSEISDEFK Unmodified 1646.7498 0.74978848 5267 Q9Y678 COPG1 Coatomer subunit gamma-1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 1 2 97.615 94.422 2 0.0018961 112567 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.243 79.583 34806000 1442500 33364000 0 0 0 0 0 0 0 0 0 0 0 0 0 41825 5267 37404 348726;348727;348728 276427;276428 276427 2 QISSLRDEVEAK Unmodified 1373.7151 0.71505795 1328 P33176 KIF5B Kinesin-1 heavy chain yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 2 2 2 1 2 2 1 38.09 38.219 2;3 0.00073892 42281 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 106.62 50.187 744540000 0 0 0 48919000 36725000 76936000 42807000 50585000 39825000 67367000 82596000 102620000 68622000 44190000 83343000 41826 1328 37405 348729;348730;348731;348732;348733;348734;348735;348736;348737;348738;348739;348740;348741;348742;348743;348744;348745;348746;348747;348748;348749;348750 276429;276430;276431;276432;276433 276431 5 QISTLAMHK Unmodified 1027.5485 0.54845032 1698 P52747 ZNF143 Zinc finger protein 143 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 34.998 30.148 2 0.021331 42297 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.184 56.148 10409000 8836200 0 1572900 0 0 0 0 0 0 0 0 0 0 0 0 41827 1698 37406 348751;348752 276434 276434 1 QISVGFIGYPNVGK Unmodified 1477.7929 0.79291434 2345 Q13823 GNL2 Nucleolar GTP-binding protein 2 yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 81.509 81.65 2 0.00050638 94619 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 68.525 50.214 48666000 0 0 0 0 0 3356800 3393800 3385600 3187700 7603900 4897400 4677000 3301400 3832900 11030000 41828 2345 37407 348753;348754;348755;348756;348757;348758;348759;348760;348761;348762 276435;276436;276437;276438;276439;276440 276440 5 QISYNYSDLDQSNVTEETPEGEEHHPVADTENK Unmodified 3774.6405 0.6405152 3405 Q8NC51 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 2 1 1 1 1 64.023 62.822 4 1.7729E-103 77280 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 126.88 126.4 262520000 22856000 49606000 24773000 0 0 15376000 6718800 12954000 9527500 18498000 24867000 28764000 0 14491000 34088000 41829 3405 37408 348763;348764;348765;348766;348767;348768;348769;348770;348771;348772;348773;348774;348775 276441;276442;276443;276444;276445;276446;276447;276448;276449;276450;276451;276452;276453;276454;276455;276456 276453 15 QISYSPGVCSIEHQQEITK Unmodified 2203.0579 0.057932169 2809 Q5VT25 CDC42BPA Serine/threonine-protein kinase MRCK alpha yes yes 0 0 0 By MS/MS 3 0 1 1 64.129 59.382 3 0.0052788 72901 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 36.112 30.532 1977800 0 1977800 0 0 0 0 0 0 0 0 0 0 0 0 0 41830 2809 37409 348776 276457 276457 1 QITAAMQNK Oxidation (M) 1019.507 0.50697943 5357 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 2 2 2 12.332 12.543 2 0.0049718 11231 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 72.138 29.138 + 36731000 0 0 0 2556100 0 0 0 0 0 0 0 16728000 8387600 9059700 0 41831 5357 37410 348777;348778;348779;348780;348781;348782;348783 276458;276459;276460 276460 6741 3 QITAQAWDGTTDYQVEETSREREER Unmodified 2997.37 0.37003484 360 O43719 HTATSF1 HIV Tat-specific factor 1 yes yes 0 0 2 By MS/MS 10 0 1 1 59.024 59.617 4 4.3002E-23 67161 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.593 76.933 18325000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18325000 41832 360 37411 348784 276461 276461 1 QITAQQINK Unmodified 1042.5771 0.57710791 3683 Q92900 UPF1 Regulator of nonsense transcripts 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.161 22.366 2 0.0033336 23426 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 93.561 68.71 169760000 0 0 0 8018100 6417400 12403000 6443600 6665700 9522400 17926000 20624000 23285000 14609000 17897000 25946000 41833 3683 37412 348785;348786;348787;348788;348789;348790;348791;348792;348793;348794;348795;348796 276462;276463;276464;276465;276466;276467;276468;276469;276470;276471;276472 276462 11 QITEEDLEGK Unmodified 1160.5561 0.55609769 3562 Q8WVK2 SNRNP27 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 26.67 26.863 3 0.035565 28875 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 26.957 14.082 61292000 0 0 0 6198300 5539400 8315000 5520600 0 5154100 0 5934000 8546800 0 8337700 7745700 41834 3562 37413 348797;348798;348799;348800;348801;348802;348803;348804;348805 276473 276473 1 QITIPSQEQEHSQK Unmodified 1651.8166 0.81656291 781 P04279 SEMG1 Semenogelin-1;Alpha-inhibin-92;Alpha-inhibin-31;Seminal basic protein yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 32.405 32.564 3 0.03118 35655 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 38.399 30.223 8849900 0 0 0 0 0 0 0 6855700 0 1994100 0 0 0 0 0 41835 781 37414 348806;348807 276474 276474 0 QITLNDLPVGR Unmodified 1224.6826 0.68263561 2245 Q13162 PRDX4 Peroxiredoxin-4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.796 75.859 2 1.6867E-05 87605 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 158.76 113.67 984230000 0 0 0 35628000 36649000 38804000 53443000 51865000 38382000 79539000 156140000 166220000 72186000 94757000 160610000 41836 2245 37415 348808;348809;348810;348811;348812;348813;348814;348815;348816;348817;348818;348819 276475;276476;276477;276478;276479;276480;276481;276482;276483;276484;276485;276486;276487;276488 276482 14 QITNANELK Unmodified 1029.5455 0.54547343 2295 Q13459 MYO9B Unconventional myosin-IXb yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 23.769 23.933 2 0.015842 25530 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 57.047 28.941 33133000 0 0 0 3254200 2412600 2943900 2654500 1714100 2065500 4587600 3738800 3853300 2830300 3077600 0 41837 2295 37416 348820;348821;348822;348823;348824;348825;348826;348827;348828;348829;348830 276489;276490;276491 276490 3 QITPQQQEK Unmodified 1098.5669 0.56693715 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11.137 10.611 2 1.1589E-05 10113 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 158.07 125.93 354500000 30751000 47882000 1029800 14527000 13598000 28375000 20328000 18104000 12856000 20843000 17085000 32491000 25959000 33195000 37478000 41838 1986 37417 348831;348832;348833;348834;348835;348836;348837;348838;348839;348840;348841;348842;348843;348844;348845 276492;276493;276494;276495;276496;276497;276498;276499;276500;276501;276502;276503;276504 276502 11 QITQSALLAEAR Unmodified 1299.7147 0.71466402 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 2 1 1 1 1 1 61.317 61.34 2 2.1649E-10 70114 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 155.11 115.81 296150000 0 0 0 0 58204000 72468000 58182000 0 0 0 0 107300000 0 0 0 41839 1986 37418 348846;348847;348848;348849;348850;348851;348852;348853;348854;348855;348856;348857 276505;276506;276507;276508;276509;276510;276511;276512;276513;276514;276515;276516 276507 12 QITQSALLAEARSDYSEAAK Unmodified 2151.0808 0.080776102 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 79.234 74.523 3 1.2327E-72 94918 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 146.1 122.87 345450000 79138000 212350000 53960000 0 0 0 0 0 0 0 0 0 0 0 0 41840 1986 37419 348858;348859;348860;348861 276517;276518;276519;276520 276519 4 QITQVYGFYDECQTK Unmodified 1878.8458 0.84581413 176 O00743 PPP6C Serine/threonine-protein phosphatase 6 catalytic subunit;Serine/threonine-protein phosphatase 6 catalytic subunit, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 69.649 69.975 2 3.851E-20 79836 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 140.24 134.4 9060700 0 0 0 0 0 0 0 0 0 0 0 0 0 3255900 5804900 41841 176 37420 348862;348863 276521;276522;276523 276521 3 QITSADAVR Unmodified 959.50361 0.50360861 699 O95834 EML2 Echinoderm microtubule-associated protein-like 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 20.821 20.925 2 0.022769 21882 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 51.335 9.6831 101860000 0 0 0 19358000 5002700 15253000 5731900 18730000 0 12948000 0 13145000 11688000 0 0 41842 699 37421 348864;348865;348866;348867;348868;348869;348870;348871 276524 276524 1 QITSYGETCPGLEQYAIK Unmodified 2056.9776 0.97755658 1641 P50990 CCT8 T-complex protein 1 subunit theta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.7 2.91 4 1 25 3 2 2 2 2 2 2 2 2 2 2 2 2 3 75.471 74.911 2;3 3.1746E-112 86104 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 194.98 159.71 4463500000 0 2557900000 13754000 75161000 71285000 213480000 112810000 74160000 237940000 153680000 164430000 247600000 132010000 135900000 273410000 41843 1641 37422 348872;348873;348874;348875;348876;348877;348878;348879;348880;348881;348882;348883;348884;348885;348886;348887;348888;348889;348890;348891;348892;348893;348894;348895;348896;348897;348898;348899;348900;348901 276525;276526;276527;276528;276529;276530;276531;276532;276533;276534;276535;276536;276537;276538;276539;276540;276541;276542;276543;276544;276545;276546;276547;276548;276549 276536 18 QITSYGETCPGLEQYAIKK Unmodified 2185.0725 0.072519601 1641 P50990 CCT8 T-complex protein 1 subunit theta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 66.97 66.199 3 9.3079E-05 75756 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 52.814 43.767 188860000 0 41690000 0 6232200 8172100 0 11350000 10470000 0 12636000 22090000 30714000 11281000 10466000 23756000 41844 1641 37423 348902;348903;348904;348905;348906;348907;348908;348909;348910;348911;348912;348913 276550;276551;276552;276553;276554;276555;276556;276557;276558 276556 8 QITVNDLPVGR Unmodified 1210.667 0.66698555 2131;1317 Q06830;P32119 PRDX1;PRDX2 Peroxiredoxin-1;Peroxiredoxin-2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 1 2 1 1 2 1 1 1 1 2 66.148 66.269 2 1.7215E-07 76365 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 146.69 107.73 5958800000 0 0 0 470700000 149780000 211610000 214740000 301880000 146980000 308320000 1057600000 889830000 203740000 551910000 1451600000 41845 2131;1317 37424 348914;348915;348916;348917;348918;348919;348920;348921;348922;348923;348924;348925;348926;348927;348928 276559;276560;276561;276562;276563;276564;276565;276566;276567;276568;276569;276570;276571;276572;276573;276574;276575;276576;276577;276578;276579;276580 276576 22 QIVRNDIK Unmodified 984.57163 0.5716286 4230 Q9BXP5 SRRT Serrate RNA effector molecule homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 20.21 16.545 2 0.030621 20819 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 109.01 27.378 116040000 93628000 9507600 12903000 0 0 0 0 0 0 0 0 0 0 0 0 41846 4230 37425 348929;348930;348931 276581 276581 0 QIVSPSSSMAQSK Unmodified 1348.6657 0.66566492 2301 Q13495 MAMLD1 Mastermind-like domain-containing protein 1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 34.279 34.175 2 0.00061534 38208 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 75.819 46.346 34904000 0 0 0 9403300 6980100 6503100 4951900 0 0 0 0 0 0 7065700 0 41847 2301 37426 348932;348933;348934;348935;348936;348937 276582;276583;276584 276584 3 QIVSPSSSMAQSK Oxidation (M) 1364.6606 0.66057954 2301 Q13495 MAMLD1 Mastermind-like domain-containing protein 1 yes yes 0 1 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 19.981 20.162 2 0.0033701 20415 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 49.5 30.229 13974000 0 0 0 1746000 1555600 1343600 0 1495400 1299900 0 0 2963800 0 1265400 2304400 41848 2301 37426 348938;348939;348940;348941;348942;348943;348944;348945 276585;276586 276585 3766 2 QIVYCIGGENLSVAK Unmodified 1649.8447 0.84469192 2602 Q16401 PSMD5 26S proteasome non-ATPase regulatory subunit 5 yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 80.851 74.418 2 0.00084116 92615 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.84 87.628 119870000 59438000 60434000 0 0 0 0 0 0 0 0 0 0 0 0 0 41849 2602 37427 348946;348947 276587 276587 1 QIWQNLGLDDTK Unmodified 1429.7201 0.72014333 1578 P49588 AARS Alanine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 77.944 76.819 2 1.3763E-15 95092 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 187.1 159.99 508730000 32761000 291240000 9446400 2838000 3679800 13065000 4924500 6177600 5010600 12876000 19950000 19313000 7025700 14867000 65559000 41850 1578 37428 348948;348949;348950;348951;348952;348953;348954;348955;348956;348957;348958;348959;348960;348961;348962;348963 276588;276589;276590;276591;276592;276593;276594;276595;276596;276597;276598;276599;276600;276601;276602 276591 15 QIWTVNEALIQK Unmodified 1441.7929 0.79291434 2725 Q5GLZ8 HERC4 Probable E3 ubiquitin-protein ligase HERC4 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 79.52 79.611 2 0.0086611 91969 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 59.426 19.508 17495000 0 0 0 0 0 5244900 2795400 0 0 4563200 0 0 2130700 2760500 0 41851 2725 37429 348964;348965;348966;348967;348968 276603 276603 1 QIYIYNEK Unmodified 1069.5444 0.5444108 3311 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 43.016 43.253 2 0.0093078 48026 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 83.313 67.019 191870000 0 0 0 0 11926000 17572000 20460000 19710000 13319000 0 32790000 34266000 0 19570000 22262000 41852 3311 37430 348969;348970;348971;348972;348973;348974;348975;348976;348977 276604;276605;276606;276607;276608;276609;276610;276611;276612;276613 276610 10 QIYLSENPEETAAR Unmodified 1619.7791 0.77911477 4965 Q9UKG1 APPL1 DCC-interacting protein 13-alpha yes yes 0 0 0 By MS/MS 10 0 1 1 53.853 54.511 2 0.0013852 60883 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.408 49.25 8425900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8425900 41853 4965 37431 348978 276614 276614 1 QIYPPINVLPSLSR Unmodified 1595.9035 0.90352742 1121;1018 P21281;P15313 ATP6V1B2;ATP6V1B1 V-type proton ATPase subunit B, brain isoform;V-type proton ATPase subunit B, kidney isoform no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 89.502 89.644 2 0.0014282 103701 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.434 44.18 17130000 0 0 0 0 0 1972600 0 1643200 770000 2893400 2378800 1469200 0 1252900 4749400 41854 1121;1018 37432 348979;348980;348981;348982;348983;348984;348985;348986 276615;276616;276617;276618;276619 276616 5 QKALGTLGMTTNEK Unmodified 1490.7763 0.776278 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 1 By MS/MS 3 0 1 1 45.8 40.965 3 0.028892 50845 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 28.632 12.495 3121700 0 3121700 0 0 0 0 0 0 0 0 0 0 0 0 0 41855 2775 37433 348987 276620 276620 1 QKEMDEAATAEER Oxidation (M) 1522.657 0.65695073 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 8.6481 8.8102 3 0.0022387 7247 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 47.189 37.137 16730000 0 0 0 0 0 0 2789800 1467900 897320 2256900 0 7692100 1625900 0 0 41856 2102 37434 348988;348989;348990;348991;348992;348993 276621 276621 3402 1 QKLEEDAEMK Unmodified 1219.5755 0.57545293 811 P05455 SSB Lupus La protein yes yes 0 0 1 By MS/MS 2.5 0.5 2 2 4 22.938 18.981 2;3 0.00016813 25310 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 144.65 95.553 92304000 0 92304000 0 0 0 0 0 0 0 0 0 0 0 0 0 41857 811 37435 348994;348995;348996;348997 276622;276623;276624 276622 1 QKPITPETAEK Unmodified 1240.6663 0.66631685 1821 P60953 CDC42 Cell division control protein 42 homolog yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.66 2.95 4 1 24 1 3 1 2 2 2 2 2 2 2 2 2 2 2 2 15.669 15.312 2;3 0.0047289 15056 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 43.897 36.168 2174600000 51673000 492570000 14714000 79620000 44463000 48012000 116510000 82522000 47668000 122790000 373150000 183530000 157010000 141280000 219110000 41858 1821 37436 348998;348999;349000;349001;349002;349003;349004;349005;349006;349007;349008;349009;349010;349011;349012;349013;349014;349015;349016;349017;349018;349019;349020;349021;349022;349023;349024;349025;349026 276625;276626;276627;276628;276629;276630;276631;276632;276633;276634;276635;276636 276625 7 QKPVQTFTEEK Unmodified 1333.6878 0.68778057 4746 Q9NYL9 TMOD3 Tropomodulin-3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.818 23.024 2 0.027117 22877 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 82.645 66.764 166070000 0 0 0 9503700 9730600 7438800 11514000 9577000 4361000 20001000 17635000 35091000 12247000 10743000 18231000 41859 4746 37437 349027;349028;349029;349030;349031;349032;349033;349034;349035;349036;349037;349038 276637;276638;276639 276638 2 QKQEATESLK Unmodified 1160.6037 0.60371659 4077 Q99996 AKAP9 A-kinase anchor protein 9 yes yes 0 0 1 By MS/MS 3 0 1 1 8.4043 5.0459 3 0.047005 6940 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 35.511 18.569 1181400 0 1181400 0 0 0 0 0 0 0 0 0 0 0 0 0 41860 4077 37438 349039 276640 276640 1 QKSMEAERLK Unmodified 1218.6391 0.63905624 2581 Q15811 ITSN1 Intersectin-1 yes yes 0 0 2 By MS/MS 2 0 1 1 21.23 18.427 3 0.033413 23356 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 64.297 30.337 + 1738500 0 0 1738500 0 0 0 0 0 0 0 0 0 0 0 0 41861 2581 37439 349040 276641 276641 0 QKVENLFNEK Unmodified 1247.651 0.65100113 1977 P78347 GTF2I General transcription factor II-I yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 40.256 40.344 3 0.033277 44819 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 27.589 12.05 140450000 0 0 0 17269000 13122000 13235000 11525000 9826400 6110700 0 0 38580000 18790000 11989000 0 41862 1977 37440 349041;349042;349043;349044;349045;349046;349047;349048;349049 276642 276642 1 QKWEAEPVYVQR Unmodified 1531.7783 0.77832691 1185 P25311 AZGP1 Zinc-alpha-2-glycoprotein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 48.978 49.136 3 1.6234E-05 56395 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 101.71 92.982 410100000 0 0 0 164070000 23816000 12345000 26511000 33837000 0 19096000 30020000 46408000 19901000 14185000 19906000 41863 1185 37441 349050;349051;349052;349053;349054;349055;349056;349057;349058;349059;349060 276643;276644;276645;276646;276647;276648;276649;276650;276651 276650 8 QKWQALAEQQEK Unmodified 1485.7576 0.75759147 576 O76074 PDE5A cGMP-specific 3',5'-cyclic phosphodiesterase yes yes 0 0 1 By MS/MS 10 0 1 1 16.058 16.571 3 0.0066414 16065 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 36.982 0 6518400 0 0 0 0 0 0 0 0 0 0 0 6518400 0 0 0 41864 576 37442 349061 276652 276652 1 QLAAEEER Unmodified 944.45632 0.45632407 2501 Q15149 PLEC Plectin yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 12.792 12.977 2 0.038334 11716 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 51.066 28.353 34552000 0 0 0 0 2814100 4135700 4996200 0 2490900 3202800 2348900 6172000 3677200 1868600 2845400 41865 2501 37443 349062;349063;349064;349065;349066;349067;349068;349069;349070;349071 276653 276653 1 QLAAENR Unmodified 800.41407 0.41406533 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 6.8796 6.9322 2 0.034409 4684 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 71.296 43.041 81180000 0 0 0 9744200 13773000 20133000 15329000 0 12440000 0 0 0 5582000 4178600 0 41866 1356 37444 349072;349073;349074;349075;349076;349077;349078 276654 276654 1 QLAAENRLTEMETLQSQLMAEK 2 Oxidation (M) 2565.2415 0.2414522 1356 P35579 MYH9 Myosin-9 yes yes 0 2 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 67.203 67.184 3 3.6745E-05 76279 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.578 39.384 72472000 0 0 0 6723300 0 18760000 0 0 0 26437000 0 0 0 0 20552000 41867 1356 37445 349079;349080;349081;349082 276655;276656 276656 2083;2084 1 QLAAENRLTEMETLQSQLMAEK Unmodified 2533.2516 0.25162295 1356 P35579 MYH9 Myosin-9 yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 91.299 84.247 3 2.1643E-141 106524 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 210.98 196.67 110980000 76491000 34494000 0 0 0 0 0 0 0 0 0 0 0 0 0 41868 1356 37445 349083;349084;349085 276657;276658;276659;276660 276660 4 QLAAENRLTEMETLQSQLMAEK Oxidation (M) 2549.2465 0.24653758 1356 P35579 MYH9 Myosin-9 yes yes 0 1 1 By MS/MS 2 0 2 2 82.511 74.381 3 4.3249E-40 100821 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 123.83 101.71 100960000 100960000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41869 1356 37445 349086;349087 276661;276662;276663 276663 2083;2084 3 QLAALGQTEPLPAEAPWAR Unmodified 2018.0585 0.058524517 3693 Q92974 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 2 2 2 2 2 2 85.063 85.169 2;3 2.3156E-77 98470 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 199.41 169.08 209970000 0 0 0 0 12524000 13343000 10312000 22840000 12065000 33842000 23025000 26358000 10370000 11265000 34024000 41870 3693 37446 349088;349089;349090;349091;349092;349093;349094;349095;349096;349097;349098;349099;349100;349101;349102;349103;349104;349105;349106;349107;349108;349109 276664;276665;276666;276667;276668;276669;276670;276671;276672;276673;276674;276675;276676;276677;276678;276679;276680;276681;276682;276683;276684;276685;276686;276687;276688 276672 18 QLACSIVDQK Unmodified 1160.586 0.58595803 4273 Q9BZL6 PRKD2 Serine/threonine-protein kinase D2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 39.721 40.065 2 0.001591 44664 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 93.598 65.085 4180800 0 0 0 0 0 0 0 0 0 0 0 0 4180800 0 0 41871 4273 37447 349110;349111 276689;276690 276690 2 QLADETLLK Unmodified 1029.5706 0.57062555 1111 P20700 LMNB1 Lamin-B1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 54.312 53.801 2 0.0091747 60049 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 67.494 23.377 146660000 0 77554000 0 0 0 6088900 7236400 4912900 0 10772000 18390000 0 0 7916600 13787000 41872 1111 37448 349112;349113;349114;349115;349116;349117;349118;349119 276691;276692;276693;276694 276694 4 QLAEDFLK Unmodified 962.5073 0.50729701 1062 P17844 DDX5 Probable ATP-dependent RNA helicase DDX5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.864 63.956 2 0.006821 73154 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 95.352 42.716 633140000 0 0 0 27914000 36329000 53593000 49475000 42498000 51756000 59994000 61945000 66267000 55835000 50333000 77202000 41873 1062 37449 349120;349121;349122;349123;349124;349125;349126;349127;349128;349129;349130;349131 276695;276696;276697;276698;276699;276700;276701 276696 3 QLAEDFLR Unmodified 990.51345 0.51344502 3670 Q92841 DDX17 Probable ATP-dependent RNA helicase DDX17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 65.584 65.6 2 0.0075833 74127 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.142 55.5 147680000 0 0 0 8973400 10137000 16148000 14474000 15520000 9608000 0 0 0 19546000 20152000 33124000 41874 3670 37450 349132;349133;349134;349135;349136;349137;349138;349139;349140 276702;276703;276704;276705;276706;276707;276708;276709 276704 8 QLAEEDAAR Unmodified 1001.4778 0.47778779 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 14.689 14.826 2 0.0051431 13398 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 82.279 8.6141 122300000 0 0 0 18707000 7767100 9814000 8841200 9923100 9091300 8400100 0 12934000 10230000 12047000 14549000 41875 2501 37451 349141;349142;349143;349144;349145;349146;349147;349148;349149;349150;349151 276710;276711;276712;276713;276714;276715 276712 6 QLAEEDLAQQR Unmodified 1299.6419 0.64189301 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 38.161 38.065 2 0.036836 42813 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 55.461 43.826 29973000 0 0 0 7916100 3742900 5080300 5460200 0 2454600 5319000 0 0 0 0 0 41876 2501 37452 349152;349153;349154;349155;349156;349157 276716 276716 0 QLAEEETK Unmodified 946.46074 0.46074075 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9.5315 9.0942 2 0.0063839 8229 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 101.33 58.413 104400000 15009000 34900000 0 4322700 4277800 5508700 4652900 0 3391600 4248400 8095200 6803400 5006000 2612100 5573500 41877 3119 37453 349158;349159;349160;349161;349162;349163;349164;349165;349166;349167;349168;349169;349170;349171 276717;276718;276719;276720;276721;276722;276723;276724;276725;276726;276727;276728;276729 276718 12 QLAEFAR Unmodified 833.43955 0.43955179 1190 P25490;Q96MM3 YY1;ZFP42 Transcriptional repressor protein YY1;Zinc finger protein 42 homolog yes no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.137 36.318 2 0.023378 39887 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 88.35 38.943 265720000 0 0 0 14453000 16112000 20002000 20015000 18738000 17045000 21396000 25722000 27247000 26144000 22575000 36272000 41878 1190 37454 349172;349173;349174;349175;349176;349177;349178;349179;349180;349181;349182;349183 276730 276730 1 QLAEGTAQQR Unmodified 1100.5574 0.5574351 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 1 2 2 2 2 10.624 10.752 2 0.0029838 9705 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 78.149 26.295 260600000 0 0 0 13951000 11450000 18087000 17837000 12256000 12314000 23411000 2471400 36331000 28654000 32809000 51022000 41879 2501 37455 349184;349185;349186;349187;349188;349189;349190;349191;349192;349193;349194;349195;349196;349197;349198;349199;349200;349201;349202;349203;349204;349205;349206 276731;276732;276733;276734;276735;276736;276737;276738 276737 8 QLAELAISK Unmodified 971.56515 0.56514624 1358 P35606 COPB2 Coatomer subunit beta' yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 53.212 53.351 2 0.0095982 61426 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 66.27 14.814 334200000 0 0 0 16911000 23057000 21796000 24222000 19218000 0 38394000 39144000 33755000 30130000 29330000 58242000 41880 1358 37456 349207;349208;349209;349210;349211;349212;349213;349214;349215;349216;349217;349218 276739;276740;276741;276742;276743;276744;276745;276746;276747;276748;276749;276750;276751 276750 13 QLAEQEELER Unmodified 1243.6044 0.60444487 4890 Q9UH65 SWAP70 Switch-associated protein 70 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 34.508 35.026 2 0.0023086 37539 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 103.19 19.764 77437000 0 0 0 0 0 0 0 0 0 0 0 0 0 30380000 47057000 41881 4890 37457 349219;349220 276752;276753 276752 2 QLAEQEELERQMK Unmodified 1630.7985 0.79847001 4890 Q9UH65 SWAP70 Switch-associated protein 70 yes yes 0 0 1 By MS/MS 3 0 1 1 52.675 47.779 3 0.002364 59155 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 67.118 60.39 9741800 0 9741800 0 0 0 0 0 0 0 0 0 0 0 0 0 41882 4890 37458 349221 276754 276754 1 QLAGEDMEISVK Unmodified 1318.6439 0.64386684 841 P07384 CAPN1 Calpain-1 catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.709 59.818 2 0.00013083 67349 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.879 43.694 151010000 0 0 0 9901400 8082300 10319000 11896000 12992000 8920300 13402000 16365000 14030000 12034000 9747300 23315000 41883 841 37459 349222;349223;349224;349225;349226;349227;349228;349229;349230;349231;349232;349233 276755;276756;276757;276758;276759;276760;276761;276762;276763;276764;276765;276766;276767;276768;276769;276770 276759 15 QLAGEDMEISVK Oxidation (M) 1334.6388 0.63878147 841 P07384 CAPN1 Calpain-1 catalytic subunit yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 2 1 1 1 1 1 1 42.866 42.955 2 0.00025392 48451 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 80.916 50.352 170130000 0 0 0 21051000 10771000 13988000 36587000 13121000 16895000 10883000 0 19862000 21488000 5479700 0 41884 841 37459 349234;349235;349236;349237;349238;349239;349240;349241;349242;349243;349244 276771;276772;276773;276774;276775;276776;276777;276778;276779;276780 276780 1034 6 QLAGILQVPLEER Unmodified 1464.83 0.83002813 3168 Q86VN1 VPS36 Vacuolar protein-sorting-associated protein 36 yes yes 0 0 0 By MS/MS 10 0 1 1 85.022 85.059 2 0.020508 98548 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 50.149 34.52 4380700 0 0 0 0 0 4380700 0 0 0 0 0 0 0 0 0 41885 3168 37460 349245 276781 276781 1 QLALEDAK Unmodified 886.476 0.47599688 2961 Q6PKG0 LARP1 La-related protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 32.019 32.383 2 0.048796 35140 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 47.349 15.222 193070000 0 0 0 0 0 26027000 0 25815000 0 31946000 29804000 31158000 23825000 0 24492000 41886 2961 37461 349246;349247;349248;349249;349250;349251;349252 276782 276782 1 QLALETIDINK Unmodified 1256.6976 0.69761697 2534 Q15428 SF3A2 Splicing factor 3A subunit 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 74.508 74.481 2 0.00063009 85541 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 78.939 50.73 79417000 0 0 0 9336600 0 22862000 0 0 16945000 0 0 30274000 0 0 0 41887 2534 37462 349253;349254;349255;349256 276783;276784;276785 276783 2 QLALWNPK Unmodified 968.54435 0.54435122 5008 Q9ULV4 CORO1C Coronin-1C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 6 4 2 2 1 1 1 1 41.664 40.452 2 0.018686 75656 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.236 49.823 30061000 0 6990400 7185200 0 0 0 0 0 0 0 0 6715800 0 0 9169700 41888 5008 37463 349257;349258;349259;349260 276786;276787;276788 276787 3 QLANQTVGR Unmodified 985.53049 0.53049207 2861 Q68EM7;Q17R89 ARHGAP17;ARHGAP44 Rho GTPase-activating protein 17;Rho GTPase-activating protein 44 yes no 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 6.0315 6.135 2 0.0090061 3728 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 67.981 7.193 2336300 0 0 0 1605200 0 0 0 0 0 0 0 0 403890 327260 0 41889 2861 37464 349261;349262;349263 276789 276789 1 QLANQTVGRAEK Unmodified 1313.7052 0.70516197 2861 Q68EM7;Q17R89 ARHGAP17;ARHGAP44 Rho GTPase-activating protein 17;Rho GTPase-activating protein 44 yes no 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 19.501 15.907 3 0.003683 22782 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.252 28.618 204390000 174230000 10890000 19267000 0 0 0 0 0 0 0 0 0 0 0 0 41890 2861 37465 349264;349265;349266 276790;276791 276790 2 QLAPIWDK Unmodified 969.52837 0.5283668 838 P07237 P4HB Protein disulfide-isomerase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 64.415 63.681 2 0.013237 78680 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 98.009 70.842 1313600000 0 933080000 0 20305000 16295000 13510000 11879000 0 12484000 19894000 63968000 47842000 16233000 46869000 111200000 41891 838 37466 349267;349268;349269;349270;349271;349272;349273;349274;349275;349276;349277;349278;349279 276792;276793;276794;276795;276796;276797;276798;276799 276796 6 QLAQYHAK Unmodified 957.50321 0.50321468 2252 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 0 0 0 By MS/MS 10 0 1 1 9.5057 9.7692 2 0.028882 8229 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 97.473 59.865 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41892 2252 37467 349280 276800 276800 1 QLASEDISHITPTQGFNIK Unmodified 2098.0695 0.069483134 1371 P36405 ARL3 ADP-ribosylation factor-like protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 6.9 3.81 3 1 6 1 2 1 1 1 1 1 1 1 77.843 76.711 3 1.2452E-13 95388 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.96 78.028 219270000 0 154870000 25451000 0 1819300 4683900 0 0 2072200 4571100 0 8880500 0 0 16925000 41893 1371 37468 349281;349282;349283;349284;349285;349286;349287;349288;349289;349290 276801;276802;276803;276804;276805;276806;276807 276802 7 QLASELEYDMK Unmodified 1325.6173 0.61731774 1463 P42695 NCAPD3 Condensin-2 complex subunit D3 yes yes 0 0 0 By MS/MS 2 0 1 1 69.52 63.651 2 0.027178 81048 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 54.539 28.434 41580000 0 41580000 0 0 0 0 0 0 0 0 0 0 0 0 0 41894 1463 37469 349291 276808 276808 1 QLAVAEGKPPEAPK Unmodified 1433.7878 0.78782897 1779 P56192 MARS Methionine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.16 3.28 4 2 19 1 4 1 2 2 2 1 1 2 2 2 1 1 1 2 40.056 38.916 2;3 0.0016528 48655 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 64.675 58.991 1054200000 15437000 617670000 7572800 23273000 22875000 44677000 24259000 23626000 20329000 39761000 51695000 43373000 28947000 26370000 64352000 41895 1779 37470 349292;349293;349294;349295;349296;349297;349298;349299;349300;349301;349302;349303;349304;349305;349306;349307;349308;349309;349310;349311;349312;349313;349314;349315;349316 276809;276810;276811;276812;276813;276814;276815;276816;276817;276818;276819;276820;276821;276822;276823;276824;276825;276826;276827;276828;276829 276820 10 QLAVISPEK Unmodified 983.56515 0.56514624 3913 Q96KR1 ZFR Zinc finger RNA-binding protein yes yes 0 0 0 By MS/MS 2 0 1 1 50.046 44.34 2 0.018051 57490 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.113 45.758 91293000 0 91293000 0 0 0 0 0 0 0 0 0 0 0 0 0 41896 3913 37471 349317 276830 276830 1 QLAVYEEFAR Unmodified 1224.6139 0.61388734 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 73.167 72.935 2 0.0033461 84384 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 76.827 51.09 25854000 0 0 0 3122000 8089600 0 0 0 0 0 0 14642000 0 0 0 41897 19 37472 349318;349319;349320 276831;276832 276832 2 QLCDNAGFDATNILNK Unmodified 1792.8414 0.84139745 4065 Q99832 CCT7 T-complex protein 1 subunit eta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 2 2 1 1 2 1 1 1 1 2 2 78.248 78.298 2;3 2.4434E-71 88294 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 235.49 213.93 679520000 0 0 0 18055000 43248000 54257000 35945000 42731000 53285000 67089000 67960000 76771000 53549000 56741000 109890000 41898 4065 37473 349321;349322;349323;349324;349325;349326;349327;349328;349329;349330;349331;349332;349333;349334;349335;349336;349337 276833;276834;276835;276836;276837;276838;276839;276840;276841;276842;276843;276844;276845;276846;276847;276848 276842 15 QLCQESFSSSALGLK Unmodified 1653.8032 0.80322103 4785 Q9P000 COMMD9 COMM domain-containing protein 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 72.741 72.94 2 4.2633E-14 83997 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 120.96 111.01 36889000 0 0 0 0 0 0 2633600 3751000 0 3597700 5341400 6023200 5421200 4591100 5530000 41899 4785 37474 349338;349339;349340;349341;349342;349343;349344;349345 276849;276850;276851;276852;276853;276854 276854 6 QLDAQQTQLR Unmodified 1199.6258 0.62584901 1238 P28715 ERCC5 DNA repair protein complementing XP-G cells yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.339 29.53 2 0.009776 32083 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 73.157 47.217 69224000 0 0 0 3186800 3830000 5184900 5363700 5056100 2804500 7051500 5992400 8731600 7053800 4624400 10344000 41900 1238 37475 349346;349347;349348;349349;349350;349351;349352;349353;349354;349355;349356;349357 276855;276856;276857;276858 276857 2 QLDDEEVSEFALDGLK Unmodified 1806.8523 0.85233929 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.47 3.59 3 2 10 1 4 1 1 1 1 1 1 1 1 1 1 86.69 85.013 2;3 3.8564E-66 105154 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 190.26 167.93 437310000 11486000 351800000 0 0 5890300 8778600 0 4782500 0 13856000 8206000 10463000 4748800 4604400 12690000 41901 3641 37476 349358;349359;349360;349361;349362;349363;349364;349365;349366;349367;349368;349369;349370;349371;349372 276859;276860;276861;276862;276863;276864;276865;276866;276867;276868;276869;276870;276871;276872;276873;276874;276875 276861 15 QLDDKDEEINQQSQLVEK Unmodified 2158.039 0.038970866 1328 P33176 KIF5B Kinesin-1 heavy chain yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 46.663 45.386 3 8.1741E-88 57377 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 151.44 136.85 757370000 10442000 163460000 3118700 41938000 46766000 44319000 45623000 41480000 37476000 55967000 58633000 56059000 50792000 38789000 62502000 41902 1328 37477 349373;349374;349375;349376;349377;349378;349379;349380;349381;349382;349383;349384;349385;349386;349387;349388 276876;276877;276878;276879;276880;276881;276882;276883;276884;276885;276886;276887;276888;276889;276890;276891;276892;276893 276880 18 QLDEANREAQK Unmodified 1300.6371 0.63714198 2129 Q06547 GABPB1 GA-binding protein subunit beta-1 yes yes 0 0 1 By MS/MS 3 0 1 1 9.8996 6.5372 3 0.041282 8692 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 56.043 21.322 10942000 0 10942000 0 0 0 0 0 0 0 0 0 0 0 0 0 41903 2129 37478 349389 276894 276894 0 QLDECASAITK Unmodified 1234.5864 0.58635197 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 36.204 35.423 2 1.4271E-07 44133 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.39 52.086 312700000 8192500 90046000 0 14585000 8343200 23918000 15229000 12325000 10256000 22389000 25609000 0 28415000 21070000 32327000 41904 4634 37479 349390;349391;349392;349393;349394;349395;349396;349397;349398;349399;349400;349401;349402 276895;276896;276897;276898;276899;276900;276901;276902;276903;276904;276905 276899 11 QLDFNSSK Unmodified 937.45051 0.45051041 1721 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 26.956 27.11 2 0.011957 28896 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 75.738 29.722 103630000 0 0 0 19076000 0 25610000 0 21463000 0 0 0 37482000 0 0 0 41905 1721 37480 349403;349404;349405;349406;349407 276906;276907 276906 2 QLDLELK Unmodified 857.48583 0.48583328 4825 Q9P2R3 ANKFY1 Rabankyrin-5 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 66.195 59.089 2 0.039422 75853 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.297 0 96723000 6587500 90135000 0 0 0 0 0 0 0 0 0 0 0 0 0 41906 4825 37481 349408;349409 276908 276908 1 QLDMELISLK Unmodified 1188.6424 0.64241028 4820 Q9P2K3 RCOR3 REST corepressor 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 83.616 83.723 2 0.032639 97095 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 42.348 18.194 44866000 0 0 0 0 1456800 2737600 3350300 4373100 3348900 6360500 5030100 5406700 0 3990900 8810800 41907 4820 37482 349410;349411;349412;349413;349414;349415;349416;349417;349418;349419 276909 276909 1 QLDMELVSVK Oxidation (M) 1176.606 0.60602477 4971 Q9UKL0 RCOR1 REST corepressor 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 54.648 55.076 2 0.0089304 62596 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 51.193 11.243 23700000 0 0 0 0 0 0 0 0 0 0 0 7925600 5260900 5207800 5305600 41908 4971 37483 349420;349421;349422;349423 276910 276910 6318 1 QLDMELVSVK Unmodified 1160.6111 0.61111015 4971 Q9UKL0 RCOR1 REST corepressor 1 yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.069 74.13 2 0.01138 86129 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 66.962 45.002 155840000 0 0 0 7637600 8742000 11210000 9978700 14153000 9055900 16414000 14509000 16940000 10182000 12700000 24322000 41909 4971 37483 349424;349425;349426;349427;349428;349429;349430;349431;349432;349433;349434;349435 276911 276911 1 QLDMILDEQRR Unmodified 1415.7191 0.71909747 1563 P49257 LMAN1 Protein ERGIC-53 yes yes 0 0 1 By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 58.165 58.277 3 0.013973 66474 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 36.284 21.253 80744000 0 0 0 3703700 3651300 7142500 4448500 6044900 6001400 0 6809500 16525000 5774800 6198500 14444000 41910 1563 37484 349436;349437;349438;349439;349440;349441;349442;349443;349444;349445;349446 276912;276913;276914;276915;276916 276915 5 QLDNIVGER Unmodified 1042.5407 0.5407224 779 P04259 KRT6B Keratin, type II cytoskeletal 6B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 2 2 2 2 1 2 1 2 1 1 37.568 37.69 2 0.0052093 47307 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 80.219 8.8763 830330000 0 0 0 155230000 35476000 31750000 71048000 105610000 19575000 45988000 15482000 57415000 269820000 22934000 0 41911 779 37485 349447;349448;349449;349450;349451;349452;349453;349454;349455;349456;349457;349458;349459;349460;349461;349462;349463 276917;276918;276919;276920 276920 4 QLDPDLVEAQRK Unmodified 1410.7467 0.74669243 3893 Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 45.171 45.214 3 0.0060756 50501 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 34.179 19.617 92049000 0 0 0 9008700 8842000 11765000 9816500 0 7386000 12027000 13450000 0 9794300 9959400 0 41912 3893 37486 349464;349465;349466;349467;349468;349469;349470;349471;349472 276921;276922 276921 2 QLDSIVGER Unmodified 1015.5298 0.52982336 74;66;58 CON__P13647;P13647;CON__P02538;P02538;CON__P04259 KRT5;KRT6A Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 6A no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 1 1 2 1 3 1 1 1 1 1 42.636 42.811 2 1.9711E-05 48442 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 151.97 70.19 + 9776000000 0 0 0 2345300000 600540000 543660000 550570000 1220000000 335470000 777350000 689950000 738300000 1346900000 327650000 300370000 41913 74;58;66 37487 349473;349474;349475;349476;349477;349478;349479;349480;349481;349482;349483;349484;349485;349486;349487 276923;276924;276925;276926;276927;276928;276929;276930;276931;276932;276933;276934;276935;276936;276937;276938;276939;276940 276937 18 QLDSIVGERGR Unmodified 1228.6524 0.65239812 74;66;58 CON__P13647;P13647;CON__P02538;P02538;CON__P04259 KRT5;KRT6A Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 6A no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 34.497 34.626 3 0.00028631 38099 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 83.397 50.172 + 142390000 0 0 0 25937000 4422500 0 11956000 20114000 8285300 11322000 19179000 18077000 23102000 0 0 41914 74;58;66 37488 349488;349489;349490;349491;349492;349493;349494;349495;349496 276941;276942;276943;276944;276945 276941 4 QLDTLGNDK Unmodified 1002.4982 0.49818889 77 CON__P19013;P19013 KRT4 Keratin, type II cytoskeletal 4 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 22.95 23.227 2 0.0013493 24515 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 130.28 81.717 + 260730000 0 0 0 4917600 0 0 61961000 139230000 0 0 0 7892800 43178000 0 3557400 41915 77 37489 349497;349498;349499;349500;349501;349502 276946;276947;276948;276949 276946 2 QLDTYAPFPGK Unmodified 1235.6186 0.61863837 3643 Q92621 NUP205 Nuclear pore complex protein Nup205 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 69.762 62.679 2 0.0051335 80083 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.1 53.713 71583000 20631000 50952000 0 0 0 0 0 0 0 0 0 0 0 0 0 41916 3643 37490 349503;349504 276950 276950 1 QLDVLYPK Unmodified 974.54368 0.54368251 2285 Q13421 MSLN Mesothelin;Megakaryocyte-potentiating factor;Mesothelin, cleaved form yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 59.253 59.186 2 0.0046938 67043 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 129.68 80.241 46985000 0 0 0 0 12686000 0 0 0 13123000 21176000 0 0 0 0 0 41917 2285 37491 349505;349506;349507 276951;276952 276951 0 QLEAIDQLHLEYAK Unmodified 1669.8675 0.86753585 356 O43707 ACTN4 Alpha-actinin-4 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 6.9 3.81 3 1 6 3 1 1 1 1 1 1 1 78.092 76.653 3 0.00023619 87781 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.136 51.017 404770000 0 322370000 33278000 0 0 2723100 0 0 0 2756600 4364600 4044300 0 3962000 31276000 41918 356 37492 349508;349509;349510;349511;349512;349513;349514;349515;349516;349517 276953;276954;276955;276956;276957;276958;276959;276960;276961 276957 8 QLECEQVLQK Unmodified 1273.6336 0.63363651 3291 Q8IZ69 TRMT2A tRNA (uracil-5-)-methyltransferase homolog A yes yes 0 0 0 By MS/MS 2 0 1 1 43.271 38.123 2 8.8747E-07 49555 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 151.97 83.591 15802000 0 15802000 0 0 0 0 0 0 0 0 0 0 0 0 0 41919 3291 37493 349518 276962 276962 1 QLEDGDQPESK Unmodified 1244.5521 0.55207495 3690 Q92945 KHSRP Far upstream element-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 12.061 12.227 2 0.0068298 10569 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.567 48.899 15576000 0 0 0 1395600 1478000 0 1373300 0 1376100 1545700 1524900 2220200 1435100 1320100 1906600 41920 3690 37494 349519;349520;349521;349522;349523;349524;349525;349526;349527;349528 276963;276964;276965 276963 3 QLEDGRTLSDYNIQK Unmodified 1778.8799 0.87989145 1933 P62987;P62979;P0CG47;P0CG48 UBA52;RPS27A;UBB;UBC Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.48 3.63 11 4 31 4 9 2 3 3 1 2 3 3 3 2 3 3 3 2 52.341 50.798 2;3 1.3391E-266 56068 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 281.26 199.92 12259000000 1022000000 7637500000 693060000 542110000 127070000 71348000 212300000 155020000 76297000 103780000 337130000 319860000 100650000 246650000 614120000 41921 1933 37495 349529;349530;349531;349532;349533;349534;349535;349536;349537;349538;349539;349540;349541;349542;349543;349544;349545;349546;349547;349548;349549;349550;349551;349552;349553;349554;349555;349556;349557;349558;349559;349560;349561;349562;349563;349564;349565;349566;349567;349568;349569;349570;349571;349572;349573;349574 276966;276967;276968;276969;276970;276971;276972;276973;276974;276975;276976;276977;276978;276979;276980;276981;276982;276983;276984;276985;276986;276987;276988;276989;276990;276991;276992;276993;276994;276995;276996;276997;276998;276999;277000;277001;277002;277003;277004;277005;277006;277007;277008;277009;277010;277011;277012;277013;277014 277012 48 QLEDLSYCREER Unmodified 1596.7202 0.72021968 4023 Q99567 NUP88 Nuclear pore complex protein Nup88 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 39.853 40.031 3 0.01076 44498 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 35.204 27.795 31015000 0 0 0 0 0 11277000 4574100 3753300 0 0 0 0 4971200 6439100 0 41922 4023 37496 349575;349576;349577;349578;349579 277015;277016;277017 277017 3 QLEEAEEEAQR Unmodified 1330.6001 0.60008777 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 23.389 23.43 2 0.00032859 24862 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 89.047 68.347 33713000 0 0 0 4905300 5679500 5285700 4886000 3574500 2495300 0 6887100 0 0 0 0 41923 1356 37497 349580;349581;349582;349583;349584;349585;349586 277018;277019;277020;277021;277022;277023 277022 6 QLEEAEEEAQRANASR Unmodified 1829.8504 0.85038224 1356 P35579 MYH9 Myosin-9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 34.644 34.831 3 3.8549E-15 38313 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 82.663 79.002 82494000 0 0 0 4099800 4430000 0 7587500 5667800 6859400 8586600 10176000 17641000 0 5102100 12344000 41924 1356 37498 349587;349588;349589;349590;349591;349592;349593;349594;349595;349596 277024;277025;277026;277027;277028;277029;277030;277031;277032;277033;277034;277035 277024 12 QLEEDLYDGQVLQK Unmodified 1676.8257 0.82573061 4500 Q9HBI1 PARVB Beta-parvin yes yes 0 0 0 By MS/MS 2 0 1 1 74.451 69.296 2 1.305E-23 87078 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 166.69 123.41 21180000 0 21180000 0 0 0 0 0 0 0 0 0 0 0 0 0 41925 4500 37499 349597 277036 277036 1 QLEEEGITFVPR Unmodified 1416.7249 0.72489436 3609 Q92503 SEC14L1 SEC14-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.438 74.476 2 4.5807E-08 85786 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 148.56 107.56 366790000 0 0 0 21634000 24467000 27709000 32071000 40520000 23481000 37355000 35563000 55432000 33212000 35351000 0 41926 3609 37500 349598;349599;349600;349601;349602;349603;349604;349605;349606;349607;349608;349609 277037;277038;277039;277040;277041;277042;277043;277044;277045;277046;277047;277048;277049 277042 12 QLEEEQAVRPK Unmodified 1325.6939 0.69392858 1003 P14635 CCNB1 G2/mitotic-specific cyclin-B1 yes yes 0 0 1 By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.625 22.83 3 0.0093258 23247 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 34.773 28.336 82413000 0 0 0 5372900 4600600 7370000 5466600 7653200 3779800 7525700 9295600 9329800 5324600 5277500 11417000 41927 1003 37501 349610;349611;349612;349613;349614;349615;349616;349617;349618;349619;349620;349621 277050;277051;277052;277053 277053 3 QLEEEQQALQK Unmodified 1342.6729 0.67285879 90;853 CON__Q3SX28;P07951 TPM2 Tropomyosin beta chain no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 31.564 30.682 2 0 38691 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 310.5 270.43 + 553980000 23749000 143490000 0 13519000 15491000 11696000 19328000 20590000 14662000 22008000 47321000 58738000 22517000 45847000 95030000 41928 90;853 37502 349622;349623;349624;349625;349626;349627;349628;349629;349630;349631;349632;349633;349634;349635;349636 277054;277055;277056;277057;277058;277059;277060;277061;277062;277063;277064;277065;277066;277067;277068;277069;277070;277071;277072;277073;277074 277058 21 QLEEILEMK Unmodified 1131.5846 0.58456105 250 O15083 ERC2 ERC protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 77.955 69.825 2 0.020072 91941 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.692 27.131 27545000 27545000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41929 250 37503 349637 277075 277075 1 QLEELLSDMK Unmodified 1204.6009 0.6009394 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 77.305 77 2 0.002198 88941 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 85.676 53.066 77248000 0 14525000 0 1404900 3143100 4983200 2605000 3956000 3855000 8034500 6095100 6367800 2481100 7972900 11824000 41930 2451 37504 349638;349639;349640;349641;349642;349643;349644;349645;349646;349647;349648;349649;349650 277076;277077;277078;277079;277080;277081;277082;277083 277076 8 QLEEPGAGTPSPVR Unmodified 1436.726 0.72595699 3941 Q96P11 NSUN5 Probable 28S rRNA (cytosine-C(5))-methyltransferase no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.898 44.072 2 1.1408E-49 48886 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 174.4 153.53 344460000 0 0 0 28481000 28772000 24162000 28810000 23077000 21900000 27190000 32839000 54335000 24770000 20236000 29891000 41931 3941 37505 349651;349652;349653;349654;349655;349656;349657;349658;349659;349660;349661;349662 277084;277085;277086;277087;277088;277089;277090;277091;277092;277093;277094;277095;277096;277097;277098;277099 277097 16 QLEEQNAR Unmodified 986.47812 0.47812214 2391 Q14203 DCTN1 Dynactin subunit 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 7.5636 7.3949 2 0.016586 5500 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 67.032 46.407 32087000 0 8335600 0 1957800 1685800 2740400 2404500 2005000 1770000 2213400 0 1639300 2447500 1361900 3526000 41932 2391 37506 349663;349664;349665;349666;349667;349668;349669;349670;349671;349672;349673;349674 277100;277101;277102;277103;277104;277105;277106 277101 7 QLEEQNARLK Unmodified 1227.6571 0.65714914 2391 Q14203 DCTN1 Dynactin subunit 1 yes yes 0 0 1 By MS/MS 2 0 1 1 21.443 18.641 2 0.012891 23903 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 104.44 40.172 10981000 0 0 10981000 0 0 0 0 0 0 0 0 0 0 0 0 41933 2391 37507 349675 277107 277107 0 QLEESVSEK Unmodified 1047.5084 0.50841922 632 O95239 KIF4A Chromosome-associated kinesin KIF4A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.327 18.517 2 0.0038222 18788 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 88.819 45.95 75687000 0 0 0 6164800 6881100 6435800 5596200 4511800 4276300 7825200 6526200 7270700 7230000 4933200 8035300 41934 632 37508 349676;349677;349678;349679;349680;349681;349682;349683;349684;349685;349686;349687 277108;277109;277110;277111;277112;277113;277114;277115;277116;277117 277114 8 QLEFSEPDFVAK Unmodified 1408.6874 0.68744622 4699 Q9NWQ9 C14orf119 Uncharacterized protein C14orf119 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 77.778 77.826 2 0.00013039 89697 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 86.898 26.462 26385000 0 0 0 2351900 0 0 6486500 0 0 0 5439900 0 3360600 0 8746000 41935 4699 37509 349688;349689;349690;349691;349692;349693;349694 277118;277119;277120;277121;277122;277123 277119 6 QLEGVDTQGTNR Unmodified 1316.6321 0.6320566 245 O15047 SETD1A Histone-lysine N-methyltransferase SETD1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.184 24.297 2 9.3088E-05 24147 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 88.496 50.409 46233000 0 0 0 3798200 3496000 5080000 4514700 5448100 3879600 5591900 6192800 0 3568500 4663000 0 41936 245 37510 349695;349696;349697;349698;349699;349700;349701;349702;349703;349704;349705;349706 277124;277125;277126;277127;277128;277129;277130;277131;277132;277133;277134 277130 11 QLEHTRGSLSEQQEK Unmodified 1768.8704 0.8703894 3495 Q8TD16 BICD2 Protein bicaudal D homolog 2 yes yes 0 0 1 By MS/MS 2 0 1 1 18.69 14.105 3 0.010685 20880 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 35.527 23.884 21234000 21234000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41937 3495 37511 349707 277135 277135 1 QLEIAHEK Unmodified 966.51345 0.51344502 1284 P30533 LRPAP1 Alpha-2-macroglobulin receptor-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 22.864 18.929 2 0.017811 23827 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 89.752 22.72 29165000 4197600 9803000 15164000 0 0 0 0 0 0 0 0 0 0 0 0 41938 1284 37512 349708;349709;349710 277136 277136 1 QLELENLTTQETR Unmodified 1573.7948 0.79476484 1068 P18031 PTPN1 Tyrosine-protein phosphatase non-receptor type 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 68.576 68.579 2 3.3556E-08 78612 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 128.01 51.188 35594000 0 0 0 2951300 3850900 0 4330900 3584300 0 4568300 0 7538700 4970700 3799200 0 41939 1068 37513 349711;349712;349713;349714;349715;349716;349717;349718;349719;349720 277137;277138;277139;277140;277141;277142;277143;277144;277145;277146 277144 10 QLELEVQQLR Unmodified 1254.6932 0.6932003 3666 Q92817 EVPL Envoplakin yes yes 0 0 0 By MS/MS 10 0 1 1 72.127 71.525 2 0.013556 82960 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 51.193 32.417 2940200 0 0 0 2940200 0 0 0 0 0 0 0 0 0 0 0 41940 3666 37514 349721 277147 277147 1 QLELPEQQEGQVK Unmodified 1524.7784 0.77838649 843 P07476 IVL Involucrin yes yes 0 0 0 By MS/MS 10 0 1 1 52.34 51.699 2 5.828E-08 59119 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 123.79 113.27 11857000 0 0 0 11857000 0 0 0 0 0 0 0 0 0 0 0 41941 843 37515 349722 277148 277148 1 QLELRQEEER Unmodified 1328.6684 0.66844211 2508 Q15233 NONO Non-POU domain-containing octamer-binding protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 26.351 26.551 2;3 0.0015727 28504 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 82.417 45.733 653690000 0 0 0 37930000 35794000 62408000 65654000 39639000 31486000 70115000 60322000 78371000 62085000 49622000 60261000 41942 2508 37516 349723;349724;349725;349726;349727;349728;349729;349730;349731;349732;349733;349734;349735;349736;349737;349738;349739;349740;349741;349742;349743;349744;349745;349746 277149;277150;277151;277152;277153;277154;277155;277156;277157;277158;277159 277149 4 QLENLEQQK Unmodified 1128.5775 0.57750184 4917 Q9UI12 ATP6V1H V-type proton ATPase subunit H yes yes 0 0 0 By MS/MS 2 0 1 1 28.915 24.567 2 6.3843E-23 32273 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 200.16 133.81 31621000 0 31621000 0 0 0 0 0 0 0 0 0 0 0 0 0 41943 4917 37517 349747 277160 277160 1 QLENSLNEFGEK Unmodified 1406.6678 0.66777341 1209 P26639 TARS Threonine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.5 2.93 4 1 1 1 3 1 1 60.059 55.392 2 3.3143E-15 73515 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 148.91 77.413 4908700000 42368000 4661600000 19319000 0 0 0 0 0 0 0 0 0 0 0 185430000 41944 1209 37518 349748;349749;349750;349751;349752;349753 277161;277162;277163;277164;277165;277166;277167 277165 7 QLEPLVAPLADGK Unmodified 1349.7555 0.7554662 3891 Q96JC1 VPS39 Vam6/Vps39-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 77.323 77.396 2 0.00089473 89342 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 68.536 48.749 32175000 0 0 0 3028900 0 0 3337800 2697500 0 5341600 0 8094700 4207200 0 5467800 41945 3891 37519 349754;349755;349756;349757;349758;349759;349760;349761 277168;277169;277170;277171;277172;277173;277174 277171 7 QLEPVYNSLAK Unmodified 1260.6714 0.67140222 982 P13667 PDIA4 Protein disulfide-isomerase A4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 58.962 57.631 2 3.5692E-05 74449 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.82 72.579 1381100000 31247000 893570000 8588700 32574000 25343000 21557000 30057000 38628000 21657000 27218000 65622000 41046000 33143000 36019000 74841000 41946 982 37520 349762;349763;349764;349765;349766;349767;349768;349769;349770;349771;349772;349773;349774;349775;349776;349777 277175;277176;277177;277178;277179;277180;277181;277182;277183;277184;277185;277186;277187;277188;277189;277190;277191;277192;277193;277194;277195;277196;277197;277198;277199 277181 25 QLEQENAALK Unmodified 1142.5932 0.5931519 3665 Q92805 GOLGA1 Golgin subfamily A member 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 26.574 26.614 2 0.0014259 28765 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 91.853 48.73 18819000 0 0 0 2426300 3946600 3667400 2933300 0 1894800 0 0 0 0 0 3951100 41947 3665 37521 349778;349779;349780;349781;349782;349783;349784 277200;277201;277202;277203;277204 277200 5 QLEQLQGER Unmodified 1099.5622 0.56218613 100 CON__Q7RTT2;CON__Q8N1N4-2;Q8N1N4 KRT78 Keratin, type II cytoskeletal 78 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.364 27.562 2 2.5864E-05 29467 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 138.78 70.804 + 348800000 0 0 0 75790000 13199000 26219000 15659000 69428000 16940000 26334000 22615000 36702000 21643000 12178000 12090000 41948 100 37522 349785;349786;349787;349788;349789;349790;349791;349792;349793;349794;349795;349796 277205;277206;277207;277208;277209;277210;277211;277212 277207 5 QLEQLQGERGALDAELK Unmodified 1896.9905 0.99050453 100 CON__Q7RTT2;CON__Q8N1N4-2;Q8N1N4 KRT78 Keratin, type II cytoskeletal 78 yes no 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.411 64.5 3 1.3948E-13 74481 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 91.657 76.021 + 111970000 0 0 0 12091000 5207600 8399300 4568900 24130000 7482200 10952000 8412200 14423000 6275200 4579300 5448800 41949 100 37523 349797;349798;349799;349800;349801;349802;349803;349804;349805;349806;349807;349808 277213;277214;277215;277216;277217;277218;277219;277220;277221;277222;277223;277224 277224 12 QLEQTLK Unmodified 858.48108 0.48108226 1712 P53367 ARFIP1 Arfaptin-1 yes yes 0 0 0 By MS/MS 10 0 1 1 20.585 20.924 2 0.04888 21622 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 64.757 21.888 12710000 0 0 0 0 0 0 0 0 0 0 0 0 12710000 0 0 41950 1712 37524 349809 277225 277225 1 QLEQTLQQFNIK Unmodified 1488.7936 0.79364262 1711 P53365 ARFIP2 Arfaptin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 77.066 76.759 2 8.6677E-93 94745 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 275.01 236.66 257540000 0 82871000 0 5096500 8262700 14196000 10932000 12378000 9283400 23191000 24055000 19356000 12689000 11495000 23736000 41951 1711 37525 349810;349811;349812;349813;349814;349815;349816;349817;349818;349819;349820;349821;349822 277226;277227;277228;277229;277230;277231;277232;277233;277234;277235;277236;277237;277238 277229 13 QLERAQLENEK Unmodified 1356.6997 0.69974224 1345 P35241 RDX Radixin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 2 3 2 25.886 21.708 2;3 1.4264E-16 31040 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 136.96 103.9 557970000 49796000 182460000 325720000 0 0 0 0 0 0 0 0 0 0 0 0 41952 1345 37526 349823;349824;349825;349826;349827;349828;349829 277239;277240;277241;277242;277243;277244;277245;277246;277247 277242 9 QLERENAELESR Unmodified 1472.7219 0.72193424 52 CON__O76013;O76013 KRT36 Keratin, type I cuticular Ha6 yes no 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 23.197 23.611 3 0.0030062 25014 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 73.881 62.267 + 48917000 0 0 0 0 0 0 0 38662000 0 0 0 0 0 0 10255000 41953 52 37527 349830;349831 277248;277249 277249 1 QLERGDVNVVDLK Unmodified 1483.7995 0.79945628 1747 P54750 PDE1A Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A yes yes 0 0 1 By MS/MS 2 0 1 1 58.231 54.405 3 0.021531 67952 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 42.209 29.229 6864400 0 0 6864400 0 0 0 0 0 0 0 0 0 0 0 0 41954 1747 37528 349832 277250 277250 1 QLERQQLETEK Unmodified 1400.726 0.72595699 1017 P15311 EZR Ezrin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 1 3 2 24.162 20.307 2;3 4.1098E-11 27226 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 180.66 106.36 1033500000 21248000 295320000 716910000 0 0 0 0 0 0 0 0 0 0 0 0 41955 1017 37529 349833;349834;349835;349836;349837;349838 277251;277252;277253;277254;277255;277256;277257 277252 6 QLESEREALQQQHSVQVDQLR Unmodified 2520.2681 0.26807638 5288 Q9Y6K9 IKBKG NF-kappa-B essential modulator yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 54.802 55.435 4 0.037962 62045 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 15.128 4.87 17065000 0 0 0 0 0 0 0 0 0 0 0 6556600 0 0 10509000 41956 5288 37530 349839;349840 277258 277258 1 QLESGGFEAR Unmodified 1092.52 0.51998696 3284 Q8IYI6 EXOC8 Exocyst complex component 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 32.274 32.481 2 0.039105 35156 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 40.331 13.467 7668800 0 0 0 0 0 1781200 0 0 0 1747000 4140600 0 0 0 0 41957 3284 37531 349841;349842;349843 277259 277259 1 QLESLWSDSPAPPGPQAGPPSRPPR Unmodified 2623.3143 0.31429829 3542 Q8WUF5 PPP1R13L RelA-associated inhibitor yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 1 2 1 75.652 75.717 3 5.0898E-41 87384 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 99.11 81.095 217900000 0 0 0 5806500 8556600 20291000 12534000 16108000 13843000 24365000 18870000 25281000 15191000 20636000 36423000 41958 3542 37532 349844;349845;349846;349847;349848;349849;349850;349851;349852;349853;349854;349855;349856 277260;277261;277262;277263;277264;277265;277266;277267;277268;277269;277270;277271;277272;277273;277274;277275 277267 16 QLESTEFNK Unmodified 1094.5244 0.52440364 3631 Q92576 PHF3 PHD finger protein 3 yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 29.862 29.814 2 0.012004 32584 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 61.962 31.459 12544000 0 0 0 1982700 1858500 3395900 0 0 1663900 0 0 0 3642900 0 0 41959 3631 37533 349857;349858;349859;349860;349861;349862 277276;277277 277276 2 QLESTQTESNK Unmodified 1263.5943 0.59427411 1328 P33176 KIF5B Kinesin-1 heavy chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7.8526 7.4595 2 9.4204E-60 5710 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 225.66 176.87 166940000 9254500 9688800 0 7536000 8042800 12795000 10415000 9623800 9316200 10490000 31311000 11435000 13197000 9504700 14334000 41960 1328 37534 349863;349864;349865;349866;349867;349868;349869;349870;349871;349872;349873;349874;349875;349876 277278;277279;277280;277281;277282;277283;277284;277285;277286;277287;277288;277289;277290 277285 13 QLESVRAEAAEK Unmodified 1329.6888 0.6888432 1081 P18858 LIG1 DNA ligase 1 yes yes 0 0 1 By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 22.272 22.507 3 0.043596 23082 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 34.331 11.214 82821000 0 0 0 0 3091000 6812100 6002200 0 3562900 9481500 12541000 16501000 0 11059000 13771000 41961 1081 37535 349877;349878;349879;349880;349881;349882;349883;349884;349885 277291 277291 0 QLETESLNGLLEDEDLK Unmodified 1944.9528 0.95278162 5393 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 2 1 1 1 2 1 1 1 1 46.426 46.605 3 0.0016577 52453 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 32.341 9.6949 + 185130000 0 0 0 7876800 13516000 26069000 15458000 7362000 20178000 13123000 22452000 17125000 14719000 8892200 18357000 41962 5393 37536 349886;349887;349888;349889;349890;349891;349892;349893;349894;349895;349896;349897;349898;349899 277292;277293;277294;277295 277292 3 QLETLGQEK Unmodified 1044.5451 0.54513908 67;51 CON__H-INV:HIT000292931;CON__P05787;P05787;CON__Q9H552 KRT8 Keratin, type II cytoskeletal 8 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.976 27.174 2 2.4886E-05 28932 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 143.73 48.382 + 2701800000 0 0 0 171270000 214990000 250720000 240180000 198640000 129300000 223800000 259910000 294310000 236040000 192060000 290540000 41963 51;67 37537 349900;349901;349902;349903;349904;349905;349906;349907;349908;349909;349910;349911 277296;277297;277298;277299;277300;277301;277302;277303;277304;277305;277306;277307;277308;277309;277310;277311 277301 15 QLEVEPEEPEAENK Unmodified 1639.7577 0.75771063 1379 P36776 LONP1 Lon protease homolog, mitochondrial yes yes 0 0 0 By MS/MS 10 0 1 1 44.441 44.491 2 8.8061E-05 50017 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 91.936 66.719 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41964 1379 37538 349912 277312 277312 1 QLEVYTSGGDPESVAGEYGR Unmodified 2112.96 0.95999226 5084 Q9Y262 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.189 69.265 2 2.0177E-58 78982 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 158.81 153.5 132460000 0 0 0 5019500 6686100 10419000 8794200 8090000 6977000 12332000 12313000 20255000 8374000 10880000 22318000 41965 5084 37539 349913;349914;349915;349916;349917;349918;349919;349920;349921;349922;349923;349924 277313;277314;277315;277316;277317;277318;277319;277320;277321;277322 277316 10 QLEYNAR Unmodified 892.44028 0.44028008 2346 Q13835 PKP1 Plakophilin-1 yes yes 0 0 0 By matching By MS/MS By matching By matching By matching By matching 10 0 6 1 1 1 1 1 1 20.027 20.322 2 0.01787 20216 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 113.08 59.374 73595000 0 0 0 0 0 5334100 0 39392000 0 6669700 9236800 7758800 5202800 0 0 41966 2346 37540 349925;349926;349927;349928;349929;349930 277323 277323 1 QLEYQQLEDDK Unmodified 1407.6518 0.65178899 5106 Q9Y2J2 EPB41L3 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 1 2 65.957 59.247 2 3.5967E-09 75647 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.54 28.831 146280000 4130300 142150000 0 0 0 0 0 0 0 0 0 0 0 0 0 41967 5106 37541 349931;349932;349933 277324;277325;277326;277327 277324 4 QLFDQVVK Unmodified 975.53893 0.53893149 1198;1017;1345 P26038;P35241;P15311 MSN;RDX;EZR Moesin;Radixin;Ezrin no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 60.937 59.17 2 0.0017362 66609 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 149.4 86.742 2747500000 204840000 2032700000 84015000 17147000 0 0 17141000 15911000 0 0 78419000 54953000 17496000 60684000 164220000 41968 1198;1345;1017 37542 349934;349935;349936;349937;349938;349939;349940;349941;349942;349943;349944;349945;349946 277328;277329;277330;277331;277332;277333;277334;277335;277336;277337;277338;277339 277331 9 QLFEEQAK Unmodified 991.49746 0.4974606 2485 Q15046 KARS Lysine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 32.391 32.185 2 0.0055452 34094 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 116.9 43.287 175360000 0 33665000 0 8448800 5776400 7150300 7514000 6266600 4561200 10111000 19734000 19939000 8769300 12993000 30434000 41969 2485 37543 349947;349948;349949;349950;349951;349952;349953;349954;349955;349956;349957;349958;349959 277340;277341;277342;277343;277344;277345 277342 6 QLFEIDSVDTEGK Unmodified 1479.7093 0.70930387 4983 Q9UL15 BAG5 BAG family molecular chaperone regulator 5 yes yes 0 0 0 By matching By matching By MS/MS By matching 10 0 4 1 1 1 1 73.93 74.121 2 0.027375 85853 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 35.664 21.971 12906000 0 0 0 0 0 0 0 0 0 2581000 2518600 0 2168500 0 5638000 41970 4983 37544 349960;349961;349962;349963 277346 277346 1 QLFHPEQLITGK Unmodified 1409.7667 0.76669959 1961;3031;4093;1962 P68363;Q71U36;P0DPH8;P0DPH7;Q6PEY2;Q9NY65;Q9BQE3;P68366 TUBA1B;TUBA1A;TUBA3E;TUBA8;TUBA1C;TUBA4A Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-8 chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain no no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.22 2.37 4 37 2 1 1 3 2 3 3 4 3 2 4 4 3 4 2 73.135 73.019 2;3 3.3526E-213 83265 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 262.07 0 31219000000 10100000 2730800 950620 857330000 955620000 4508800000 1716400000 2167800000 1948100000 2992800000 2312500000 3579000000 2559100000 2456000000 5151700000 41971 1961;3031;4093;1962 37545 349964;349965;349966;349967;349968;349969;349970;349971;349972;349973;349974;349975;349976;349977;349978;349979;349980;349981;349982;349983;349984;349985;349986;349987;349988;349989;349990;349991;349992;349993;349994;349995;349996;349997;349998;349999;350000;350001;350002;350003;350004 277347;277348;277349;277350;277351;277352;277353;277354;277355;277356;277357;277358;277359;277360;277361;277362;277363;277364;277365;277366;277367;277368;277369;277370;277371;277372;277373;277374;277375;277376;277377;277378;277379;277380;277381;277382;277383;277384;277385;277386;277387;277388;277389;277390;277391;277392;277393;277394;277395;277396 277390 45 QLFHPEQLITGKEDAANNYAR Unmodified 2414.1979 0.19787154 1961;3031;4093;1962 P68363;Q71U36;P0DPH8;P0DPH7;Q9NY65;Q9BQE3;P68366 TUBA1B;TUBA1A;TUBA8;TUBA1C;TUBA4A Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-8 chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain no no 0 0 1 By matching By matching By MS/MS By MS/MS 10 0 6 1 1 2 2 71.732 72.045 3;4 7.1882E-06 82145 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.087 55.124 71083000 0 0 0 0 0 0 0 2625700 0 0 5193200 14383000 0 0 48881000 41972 1961;3031;4093;1962 37546 350005;350006;350007;350008;350009;350010 277397;277398;277399;277400 277397 4 QLFLDVLDGTK Unmodified 1247.6762 0.67615325 2756 Q5SRE5 NUP188 Nucleoporin NUP188 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 87.415 87.555 2 0.041013 101236 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.671 24.716 12995000 0 0 0 0 0 0 0 2354500 1561900 3148900 0 0 1140600 1678600 3110600 41973 2756 37547 350011;350012;350013;350014;350015;350016 277401 277401 1 QLFLQTYAR Unmodified 1138.6135 0.61349341 1721 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 68.495 68.72 2 0.017888 78865 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 95.815 69.122 139950000 0 0 0 0 0 16127000 20716000 0 13353000 28488000 2845500 23895000 0 0 34524000 41974 1721 37548 350017;350018;350019;350020;350021;350022;350023 277402 277402 0 QLFNCQSLHK Unmodified 1273.6237 0.62374052 3976 Q96RT1 ERBB2IP Protein LAP2 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 25.103 25.266 2 0.039306 26812 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 40.268 2.7099 35679000 0 0 0 7545700 0 0 4596900 5242200 0 7399800 0 10894000 0 0 0 41975 3976 37549 350024;350025;350026;350027;350028 277403;277404 277403 2 QLFNSLATQEGEWK Unmodified 1649.8049 0.80493559 1970 P78316 NOP14 Nucleolar protein 14 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 96.329 92.291 2 0.030566 113958 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 42.743 5.5632 24854000 0 24854000 0 0 0 0 0 0 0 0 0 0 0 0 0 41976 1970 37550 350029;350030 277405 277405 1 QLFQLPAK Unmodified 943.5491 0.54910224 2472 Q15014 MORF4L2 Mortality factor 4-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 69.797 69.182 2 0.01735 79317 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 65.803 49.248 161680000 70532000 0 0 5845200 4951800 7649400 7892400 7080700 6049100 9241000 7096700 10599000 7927600 0 16815000 41977 2472 37551 350031;350032;350033;350034;350035;350036;350037;350038;350039;350040;350041;350042 277406;277407;277408;277409;277410;277411;277412;277413;277414 277411 9 QLFSFPIK Unmodified 978.55385 0.55385327 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 83.889 83.995 2 0.018283 97301 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 64.567 17.904 77691000 0 0 0 0 4382900 11233000 5798600 8745900 6202800 8022200 4847900 6426100 3818300 6262600 11950000 41978 19 37552 350043;350044;350045;350046;350047;350048;350049;350050;350051;350052;350053 277415;277416;277417 277415 3 QLFTDVATGEMSR Unmodified 1453.6871 0.68712864 2933 Q6P3X3 TTC27 Tetratricopeptide repeat protein 27 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 70.062 70.066 2 0.036572 80099 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.999 23.344 7666500 0 0 0 0 1147700 0 0 0 0 0 0 0 0 0 6518700 41979 2933 37553 350054;350055 277418 277418 1 QLFTLVEWAK Unmodified 1233.6758 0.67575932 1237;1095 P19793;P48443;P28702 RXRA;RXRG;RXRB Retinoic acid receptor RXR-alpha;Retinoic acid receptor RXR-gamma;Retinoic acid receptor RXR-beta no no 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 89.32 89.47 2 0.010197 103457 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.432 23.591 5494900 0 0 0 0 0 0 0 0 0 0 1458100 0 0 852600 3184200 41980 1095;1237 37554 350056;350057;350058 277419 277419 1 QLGDSPAEDK Unmodified 1058.488 0.48801813 4437 Q9H7S9 ZNF703 Zinc finger protein 703 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 14.465 14.656 2 0.022012 14004 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 46.334 19.732 32673000 0 0 0 0 3147800 2304800 2953700 3866900 0 3047900 3238800 3419900 3275500 3012200 4405700 41981 4437 37555 350059;350060;350061;350062;350063;350064;350065;350066;350067;350068 277420 277420 1 QLGDVFTEEK Unmodified 1164.5663 0.56626845 5068 Q9UQ84 EXO1 Exonuclease 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 55.433 55.817 2 0.0025976 62445 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.98 82.208 31639000 0 0 0 0 0 4842900 0 0 0 0 7358400 6660200 4853800 0 7924100 41982 5068 37556 350069;350070;350071;350072;350073;350074;350075 277421;277422;277423;277424;277425;277426 277421 6 QLGEANEEFALR Unmodified 1375.6732 0.67319314 5268 Q9Y679 AUP1 Ancient ubiquitous protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.782 62.878 2 1.8389E-08 71022 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 135.86 106.77 245450000 0 0 0 12096000 21058000 15801000 16421000 25929000 13244000 22564000 28443000 25315000 24559000 19859000 20163000 41983 5268 37557 350076;350077;350078;350079;350080;350081;350082;350083;350084;350085;350086;350087 277427;277428;277429;277430;277431;277432;277433;277434;277435;277436;277437;277438 277430 12 QLGELLTDGVR Unmodified 1199.651 0.65100113 3213 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.226 71.3 2 0.00034045 81652 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 118.71 80.984 368370000 0 0 0 19553000 18436000 32739000 23692000 25990000 20286000 39448000 45234000 44708000 31777000 23810000 42698000 41984 3213 37558 350088;350089;350090;350091;350092;350093;350094;350095;350096;350097;350098;350099 277439;277440;277441;277442;277443;277444;277445;277446;277447;277448 277446 9 QLGEVASFGGSNIEPSVR Unmodified 1845.9221 0.92209062 952 P11532 DMD Dystrophin yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 75.027 74.672 2 0.0024272 86318 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 60.157 34.683 3874600 0 0 0 0 3874600 0 0 0 0 0 0 0 0 0 0 41985 952 37559 350100;350101 277449;277450 277450 2 QLGGSVELVDIGK Unmodified 1313.7191 0.7190807 3910 Q96KP4 CNDP2 Cytosolic non-specific dipeptidase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 78.678 73.934 2 0.00020652 92982 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.156 73.935 322870000 13235000 303860000 5780700 0 0 0 0 0 0 0 0 0 0 0 0 41986 3910 37560 350102;350103;350104;350105 277451;277452;277453;277454 277451 4 QLGHSVDK Unmodified 882.45593 0.45593014 4477 Q9H9T3 ELP3 Elongator complex protein 3 yes yes 0 0 0 By matching By MS/MS By matching 2 0 3 1 1 1 7.3244 4.331 2 0.023547 6822 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.279 21.92 27659000 13875000 11706000 2078200 0 0 0 0 0 0 0 0 0 0 0 0 41987 4477 37561 350106;350107;350108 277455 277455 1 QLGIIVSDFQPSSQAGLNQK Unmodified 2129.1117 0.1116823 4150 Q9BTT4 MED10 Mediator of RNA polymerase II transcription subunit 10 yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 2 1 1 2 1 2 1 1 82.673 82.756 2;3 6.9457E-07 96027 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 65.563 60.069 29916000 0 0 0 0 2893900 2485300 1283700 3141800 0 2463900 4349600 3086100 0 0 10212000 41988 4150 37562 350109;350110;350111;350112;350113;350114;350115;350116;350117;350118;350119 277456;277457;277458;277459 277459 4 QLGISATMLNASSSK Unmodified 1506.7712 0.77119262 1496 P46063 RECQL ATP-dependent DNA helicase Q1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72.323 70.948 2;3 2.5114E-41 91257 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 149.23 144.77 268220000 192090000 6335700 3798500 2170500 2068400 6031300 2752100 4050500 2625300 5946300 6180700 8413500 2248700 5373300 18140000 41989 1496 37563 350120;350121;350122;350123;350124;350125;350126;350127;350128;350129;350130;350131;350132;350133;350134;350135 277460;277461;277462;277463;277464;277465;277466;277467;277468;277469;277470;277471;277472;277473 277466 13 QLGISATMLNASSSK Oxidation (M) 1522.7661 0.76610725 1496 P46063 RECQL ATP-dependent DNA helicase Q1 yes yes 0 1 0 By MS/MS 2 0 1 1 63.317 55.049 2 7.8619E-07 74332 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.94 76.954 24312000 24312000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41990 1496 37563 350136 277474 277474 2364 1 QLGLPTALK Unmodified 939.57532 0.57531699 4962 Q9UKD2 MRTO4 mRNA turnover protein 4 homolog yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 67.606 67.668 2 0.043053 77804 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 43.772 11.645 6495900 0 0 0 0 0 4824700 0 0 1671200 0 0 0 0 0 0 41991 4962 37564 350137;350138 277475 277475 1 QLGQAVNTAQGCGLK Unmodified 1543.7777 0.77767498 3253 Q8IX03 WWC1 Protein KIBRA yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 45.649 40.508 2 0.00027808 52984 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.47 85.73 15497000 0 15497000 0 0 0 0 0 0 0 0 0 0 0 0 0 41992 3253 37565 350139;350140 277476 277476 1 QLGSVATGSTLQQSLELK Unmodified 1859 6.5851002E-06 4126 Q9BSJ2 TUBGCP2 Gamma-tubulin complex component 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 78.372 77.92 2 7.4916E-204 96399 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 247.3 213.54 131190000 0 96372000 0 0 4503800 4184600 2620000 4145900 2950700 7173100 4371600 0 0 4869000 0 41993 4126 37566 350141;350142;350143;350144;350145;350146;350147;350148;350149 277477;277478;277479;277480;277481 277478 5 QLGYSVYR Unmodified 984.50288 0.50288033 1852 P61599 NAA20 N-alpha-acetyltransferase 20 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 43.419 43.71 2 0.0043249 48772 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 111.82 42.384 903000000 0 0 0 0 0 0 206270000 420260000 223450000 19327000 13148000 20554000 0 0 0 41994 1852 37567 350150;350151;350152;350153;350154;350155 277482;277483;277484;277485;277486;277487 277484 6 QLHEIPAFYCPDK Unmodified 1616.7657 0.76571331 2918 Q6P1L5 FAM117B Protein FAM117B yes yes 0 0 0 By MS/MS 2 0 1 1 76.187 68.056 3 1.0675E-08 89732 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.231 81.187 9545900 9545900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41995 2918 37568 350156 277488 277488 1 QLHFQEK Unmodified 928.47667 0.47666558 5301 Q9Y6Y8 SEC23IP SEC23-interacting protein yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 23.466 19.494 2 0.01229 27869 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 124.59 79.983 126390000 109680000 0 16710000 0 0 0 0 0 0 0 0 0 0 0 0 41996 5301 37569 350157;350158 277489 277489 1 QLHHEAQQSEGEQNYRK Unmodified 2080.9675 0.96747768 1739 P54278 PMS2 Mismatch repair endonuclease PMS2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 2 1 1 1 2 2 7.0717 7.3035 3;4 8.4263E-26 5307 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 81.526 72.343 95687000 0 0 0 0 0 0 0 7178300 0 10102000 18691000 5959800 4580600 15292000 33883000 41997 1739 37570 350159;350160;350161;350162;350163;350164;350165;350166;350167;350168 277490;277491;277492;277493;277494;277495;277496 277492 6 QLHQSCQTDDGEDDLK Unmodified 1887.7905 0.79048409 1838 P61201 COPS2 COP9 signalosome complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 20.197 20.451 3 2.1876E-10 21347 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 92.38 81.593 165000000 0 0 0 11482000 0 18121000 9038400 8230500 0 15722000 23250000 18578000 23029000 17588000 19961000 41998 1838 37571 350169;350170;350171;350172;350173;350174;350175;350176;350177;350178 277497;277498;277499;277500;277501;277502;277503;277504;277505;277506;277507;277508 277497 12 QLHSGGPENDVTK Unmodified 1380.6634 0.66335673 5183 Q9Y448 KNSTRN Small kinetochore-associated protein yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.89 2.72 3 1 24 1 2 1 2 2 2 2 2 2 2 2 2 2 2 2 14.852 14.489 2;3 8.8603E-12 13513 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 98.337 90.372 495790000 5258700 63043000 9830900 22025000 27245000 30245000 23105000 42151000 19299000 38594000 43060000 47247000 40090000 30102000 54498000 41999 5183 37572 350179;350180;350181;350182;350183;350184;350185;350186;350187;350188;350189;350190;350191;350192;350193;350194;350195;350196;350197;350198;350199;350200;350201;350202;350203;350204;350205;350206 277509;277510;277511;277512;277513;277514;277515;277516;277517;277518;277519;277520;277521;277522;277523;277524 277517 13 QLICDPSYVK Unmodified 1221.6064 0.60635913 1620 P50395 GDI2 Rab GDP dissociation inhibitor beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.56 3.86 3 1 5 1 2 1 1 1 1 1 1 54.762 52.379 2 0.008973 58304 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.485 32.55 640620000 35317000 567050000 5571400 6009600 0 0 0 0 0 0 5739400 5017800 0 5436200 10479000 42000 1620 37573 350207;350208;350209;350210;350211;350212;350213;350214;350215 277525;277526;277527;277528;277529;277530;277531 277526 5 QLIDEGIAPEEGGVDAK Unmodified 1739.8578 0.85775902 3182 Q86WB0 ZC3HC1 Nuclear-interacting partner of ALK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 64.799 64.826 2 1.0222E-06 74496 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 82.543 63.798 40160000 0 0 0 2526700 2804400 4933100 4737100 2518000 3258100 5771700 0 0 4340400 2954000 6316500 42001 3182 37574 350216;350217;350218;350219;350220;350221;350222;350223;350224;350225 277532;277533;277534;277535;277536;277537;277538;277539;277540;277541 277539 10 QLIDITGK Unmodified 886.51238 0.51238239 2380 Q14157 UBAP2L Ubiquitin-associated protein 2-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54.477 53.395 2 0.0062563 60226 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 102.41 18.309 1489500000 7178200 177570000 2410600 78959000 83402000 87858000 121420000 75831000 100350000 129860000 147480000 131130000 107330000 96281000 142430000 42002 2380 37575 350226;350227;350228;350229;350230;350231;350232;350233;350234;350235;350236;350237;350238;350239;350240 277542;277543;277544;277545;277546;277547;277548;277549;277550;277551;277552;277553;277554;277555 277548 14 QLIEAHEQGK Unmodified 1151.5935 0.59348625 4477 Q9H9T3 ELP3 Elongator complex protein 3 yes yes 0 0 0 By MS/MS 2 0 1 1 19.096 16.496 3 0.020243 20825 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 51.762 31.555 19789000 0 0 19789000 0 0 0 0 0 0 0 0 0 0 0 0 42003 4477 37576 350241 277556 277556 1 QLIELDYLNPGSIR Unmodified 1629.8726 0.87262123 4902 Q9UHI6 DDX20 Probable ATP-dependent RNA helicase DDX20 yes yes 0 0 0 By MS/MS 10 0 1 1 88.297 88.407 2 0.022388 102565 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 59.542 28.111 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42004 4902 37577 350242 277557 277557 1 QLIEMPVSDGDK Oxidation (M) 1346.6388 0.63878147 5309 yes yes 0 1 0 By MS/MS By MS/MS 2 0 8 4 4 69.839 62.931 2 0.003544 80904 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.516 34.167 + 1781800000 228970000 1552800000 0 0 0 0 0 0 0 0 0 0 0 0 0 42005 5309 37578 350243;350244;350245;350246;350247;350248;350249;350250 277558;277559;277560;277561;277562;277563 277559 6712 5 QLIFTTEDNGK Unmodified 1264.6299 0.62993134 4031 Q99598 TSNAX Translin-associated protein X yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 55.114 53.79 2 0.00032765 59410 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.08 70.3 5997400000 8384000 0 2118200 0 0 1014400000 0 0 1066200000 1283600000 0 0 1564100000 644290000 414420000 42006 4031 37579 350251;350252;350253;350254;350255;350256;350257;350258;350259 277564;277565;277566;277567;277568;277569;277570;277571;277572;277573 277567 9 QLIFTTSDNLVPGR Unmodified 1559.8308 0.83075641 1559 P49116 NR2C2 Nuclear receptor subfamily 2 group C member 2 yes yes 0 0 0 By MS/MS 10 0 1 1 80.557 80.725 2 0.052815 93224 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 41.283 28.192 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42007 1559 37580 350260 277574 277574 1 QLIMANPQMQQLIQR 2 Oxidation (M) 1842.9444 0.94442274 4899;5018 Q9UHD9;Q9UMX0 UBQLN2;UBQLN1 Ubiquilin-2;Ubiquilin-1 no no 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 33 2 4 3 2 3 2 3 2 3 3 3 3 63.26 63.347 2;3 3.1247E-27 71648 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 127.76 101.65 320780000 0 0 0 11766000 31637000 28763000 15670000 34616000 8711100 33820000 17780000 47649000 34623000 19984000 35759000 42008 4899;5018 37581 350261;350262;350263;350264;350265;350266;350267;350268;350269;350270;350271;350272;350273;350274;350275;350276;350277;350278;350279;350280;350281;350282;350283;350284;350285;350286;350287;350288;350289;350290;350291;350292;350293 277575;277576;277577;277578;277579;277580;277581;277582;277583;277584;277585;277586;277587;277588;277589;277590;277591;277592;277593;277594;277595;277596;277597;277598;277599;277600;277601;277602;277603 277597 6257;6258 25 QLIMANPQMQQLIQR Unmodified 1810.9546 0.95459349 4899;5018 Q9UHD9;Q9UMX0 UBQLN2;UBQLN1 Ubiquilin-2;Ubiquilin-1 no no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 82.404 82.54 2;3 5.0875E-27 95187 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 129.71 123.58 65705000 0 0 0 0 0 3924300 0 5145400 0 5612200 2609400 0 0 7663800 40750000 42009 4899;5018 37581 350294;350295;350296;350297;350298;350299;350300 277604;277605;277606;277607;277608 277605 5 QLIMANPQMQQLIQR Oxidation (M) 1826.9495 0.94950811 4899;5018 Q9UHD9;Q9UMX0 UBQLN2;UBQLN1 Ubiquilin-2;Ubiquilin-1 no no 0 1 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 1 1 2 2 2 1 2 2 2 2 2 77.963 78.064 2;3 5.0096E-36 89766 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 157.24 133.39 210630000 0 0 0 7198900 3604400 6841600 9774100 20933000 4557900 10799000 18558000 32348000 19469000 23280000 53266000 42010 4899;5018 37581 350301;350302;350303;350304;350305;350306;350307;350308;350309;350310;350311;350312;350313;350314;350315;350316;350317;350318;350319;350320 277609;277610;277611;277612;277613;277614;277615;277616;277617;277618;277619 277611 6257;6258 9 QLIPIFTDVALK Unmodified 1356.8017 0.80168812 4973 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 93.323 93.46 2 0.00078564 108462 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.533 58.918 11723000 0 0 0 0 0 1654700 0 1164600 0 3138000 1765200 0 0 0 4000200 42011 4973 37582 350321;350322;350323;350324;350325 277620 277620 1 QLIVANAGDSR Unmodified 1142.6044 0.60438529 275 O15355 PPM1G Protein phosphatase 1G yes yes 0 0 0 By MS/MS 10 0 1 1 50.926 51.09 2 0.020046 57772 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 42.864 5.1418 8484100 0 0 0 0 0 0 0 8484100 0 0 0 0 0 0 0 42012 275 37583 350326 277621 277621 1 QLIVANAGDSRCVVSEAGK Unmodified 1973 2.33601E-05 275 O15355 PPM1G Protein phosphatase 1G yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.33 0.471 2 1 1 1 1 60.163 54.525 3 4.6661E-05 73494 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.737 54.316 93408000 24477000 9648300 59282000 0 0 0 0 0 0 0 0 0 0 0 0 42013 275 37584 350327;350328;350329 277622;277623;277624;277625 277624 4 QLIVGVNK Unmodified 869.53345 0.53345218 1960 P68104;Q5VTE0;Q05639 EEF1A1;EEF1A1P5;EEF1A2 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 42.62 41.148 2 0.0048481 46072 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 109.11 52.217 86359000000 7240600000 13582000000 482850000 3903200000 4421600000 5203000000 5203400000 4895600000 3999400000 6050400000 6176700000 6523000000 5781700000 5610000000 7284900000 42014 1960 37585 350330;350331;350332;350333;350334;350335;350336;350337;350338;350339;350340;350341;350342;350343;350344;350345;350346 277626;277627;277628;277629;277630;277631;277632;277633;277634;277635;277636;277637;277638;277639;277640;277641;277642;277643;277644;277645;277646;277647;277648;277649;277650;277651;277652;277653;277654;277655;277656;277657;277658;277659;277660;277661;277662;277663;277664;277665;277666;277667;277668 277631 41 QLLADFSCNK Unmodified 1194.5703 0.57030797 2150 Q08188 TGM3 Protein-glutamine gamma-glutamyltransferase E;Protein-glutamine gamma-glutamyltransferase E 50 kDa catalytic chain;Protein-glutamine gamma-glutamyltransferase E 27 kDa non-catalytic chain yes yes 0 0 0 By MS/MS By MS/MS By matching By matching 10 0 4 1 1 1 1 59.255 59.294 2 0.0035261 68372 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 76.17 53.43 28846000 0 0 0 14478000 0 0 0 5534000 0 2703000 0 6130500 0 0 0 42015 2150 37586 350347;350348;350349;350350 277669;277670 277670 2 QLLALDAVDPQGEEK Unmodified 1624.8308 0.83081599 4983 Q9UL15 BAG5 BAG family molecular chaperone regulator 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.86 3.4 1 1 5 2 1 1 1 1 1 79.567 76.929 2 6.5133E-18 89408 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 106.49 80.833 35923000 0 32998000 0 0 0 0 0 0 0 0 0 0 0 2924500 0 42016 4983 37587 350351;350352;350353;350354;350355;350356;350357 277671;277672;277673;277674;277675;277676;277677;277678 277675 8 QLLAPVVK Unmodified 866.55894 0.55893865 2321 Q13576 IQGAP2 Ras GTPase-activating-like protein IQGAP2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.957 52.104 2 0.047391 57456 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.849 0 858570000 0 0 0 59905000 60306000 96226000 66227000 34077000 57913000 89772000 108570000 118240000 48654000 44408000 74271000 42017 2321 37588 350358;350359;350360;350361;350362;350363;350364;350365;350366;350367;350368;350369 277679 277679 1 QLLCGAAIGTHEDDK Unmodified 1626.7672 0.76716988 964 P12268 IMPDH2 Inosine-5'-monophosphate dehydrogenase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 1 3 1 2 1 1 1 1 1 1 2 2 47.856 46.376 2;3 1.4376E-14 50716 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 116.24 91.446 421890000 31826000 185930000 35136000 17693000 0 9982400 0 2861900 7565200 12451000 0 27574000 19162000 25386000 46323000 42018 964 37589 350370;350371;350372;350373;350374;350375;350376;350377;350378;350379;350380;350381;350382;350383;350384;350385;350386 277680;277681;277682;277683;277684;277685;277686;277687;277688;277689;277690;277691;277692;277693;277694;277695 277684 14 QLLCGAAVGTREDDK Unmodified 1631.7937 0.79371898 1114 P20839 IMPDH1 Inosine-5'-monophosphate dehydrogenase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 39.625 39.151 3 0.0003083 49345 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 80.534 69.429 56563000 0 0 20934000 0 3175300 5948700 3189300 4737200 0 10928000 7650200 0 0 0 0 42019 1114 37590 350387;350388;350389;350390;350391;350392;350393 277696;277697 277697 2 QLLDDEEQLTAK Unmodified 1401.6987 0.69873919 4128 Q9BSJ8 ESYT1 Extended synaptotagmin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 2 1 1 1 1 1 56.105 56.446 2 0.0018162 64337 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 90.685 61.598 43309000 0 0 0 0 0 0 0 0 0 0 0 14905000 15381000 13023000 0 42020 4128 37591 350394;350395;350396;350397;350398;350399;350400 277698;277699;277700;277701;277702 277699 5 QLLDEVEVATEPAGSRIVQEK Unmodified 2310.2067 0.2067049 1971 P78318 IGBP1 Immunoglobulin-binding protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 99.58 91.449 3 0.014348 117839 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 28.65 6.847 54119000 54119000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42021 1971 37592 350401 277703 277703 1 QLLDLDPEVECLK Unmodified 1570.7913 0.79125936 4396 Q9H4A6 GOLPH3 Golgi phosphoprotein 3 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 83.996 84.146 2 0.021865 97547 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 65.5 40.647 7446900 0 0 0 0 0 0 0 0 0 3423600 4023200 0 0 0 0 42022 4396 37593 350402;350403 277704;277705 277705 0 QLLDLPLDTDLENEK Unmodified 1754.8938 0.89381018 311 O43264 ZW10 Centromere/kinetochore protein zw10 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 6 4 2 2 1 1 1 1 91.629 87.938 2 1.203E-40 109163 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 146.36 98.418 72396000 0 71460000 935990 0 0 0 0 0 0 0 0 0 0 0 0 42023 311 37594 350404;350405;350406;350407 277706;277707;277708;277709 277706 4 QLLDSEGFLEDK Unmodified 1392.6773 0.67727546 2843 Q66K14 TBC1D9B TBC1 domain family member 9B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.032 76.071 2 0.0043631 87895 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 70.1 51.788 38779000 0 0 0 2869400 2940500 3295200 3021500 3254100 2793000 4277700 3075100 3661300 6031700 3560100 0 42024 2843 37595 350408;350409;350410;350411;350412;350413;350414;350415;350416;350417;350418 277710;277711;277712;277713 277711 4 QLLEEELAR Unmodified 1099.5873 0.58733824 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 58.001 58.173 2 0.00355 67150 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 89.698 62.902 119460000 0 0 0 10766000 0 7354800 8092600 7941200 8478800 12066000 13968000 19345000 11059000 10248000 10135000 42025 2501 37596 350419;350420;350421;350422;350423;350424;350425;350426;350427;350428;350429 277714;277715;277716;277717;277718;277719;277720;277721;277722;277723;277724;277725 277725 12 QLLEELER Unmodified 1028.5502 0.55022446 4695 Q9NWB6 ARGLU1 Arginine and glutamate-rich protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.873 61.973 2 0.035078 69742 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 52.716 7.6347 181610000 0 0 0 10717000 15444000 12200000 15228000 11480000 11709000 16930000 18825000 21637000 13751000 14047000 19643000 42026 4695 37597 350430;350431;350432;350433;350434;350435;350436;350437;350438;350439;350440;350441 277726 277726 1 QLLEGEESR Unmodified 1059.5197 0.51965261 103 CON__Q7Z794;Q7Z794 KRT77 Keratin, type II cytoskeletal 1b no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 25.935 26.125 2 0.0039613 27768 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 99.136 69.329 + 225020000 0 0 0 58934000 0 16175000 0 15138000 0 35313000 0 78093000 21364000 0 0 42027 103 37598 350442;350443;350444;350445;350446;350447 277727;277728;277729;277730;277731;277732 277728 6 QLLELQQK Unmodified 998.57605 0.57604528 602 O94913 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 48.426 48.129 2 0.012531 53010 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.423 28.541 77479000 0 16210000 0 4576500 3231800 4777700 3909000 4244300 3554800 6028100 5090900 5333800 7001900 5471400 8048000 42028 602 37599 350448;350449;350450;350451;350452;350453;350454;350455;350456;350457;350458;350459;350460 277733;277734;277735;277736;277737 277736 5 QLLEVQLQQNK Unmodified 1339.746 0.74596415 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 0 By MS/MS 2 0 1 1 68.747 62.847 2 0.039539 80283 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 49.715 22.768 8078600 0 8078600 0 0 0 0 0 0 0 0 0 0 0 0 0 42029 2446 37600 350461 277738 277738 1 QLLFPAEEDNGAGPPRDGDGVPGGGPLSPAR Unmodified 3042.4795 0.47952571 3679 Q92888 ARHGEF1 Rho guanine nucleotide exchange factor 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 80.156 80.253 3 1.3024E-19 92673 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.568 12.446 61075000 0 0 0 0 1698800 8452200 0 3626000 4596100 6781300 6626400 7851600 5019800 4787800 11635000 42030 3679 37601 350462;350463;350464;350465;350466;350467;350468;350469;350470;350471 277739;277740;277741;277742;277743;277744;277745;277746;277747 277739 7 QLLGEHLTAILQK Unmodified 1462.8508 0.85076357 2332;2331 Q13619;Q13620 CUL4A;CUL4B Cullin-4A;Cullin-4B no no 0 0 0 By MS/MS 10 0 1 1 77.656 77.921 3 0.01043 89573 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.581 26.177 9936800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9936800 42031 2331;2332 37602 350472 277748 277748 1 QLLGFPCAEVSGLSTER Unmodified 1862.9196 0.91964777 2285 Q13421 MSLN Mesothelin;Megakaryocyte-potentiating factor;Mesothelin, cleaved form yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 84.746 84.871 2 0.00066781 98020 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.412 44.938 13150000 0 0 0 0 0 0 0 0 0 2607500 0 4241300 1566600 0 4735000 42032 2285 37603 350473;350474;350475;350476 277749;277750 277750 2 QLLHLAEEK Unmodified 1079.5975 0.597509 2033 Q00341 HDLBP Vigilin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 43.147 42.072 2 5.8625E-07 61678 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 179.37 79.997 159330000 61647000 0 11254000 6288300 0 0 0 0 0 13080000 13867000 15523000 8719300 9608100 19346000 42033 2033 37604 350477;350478;350479;350480;350481;350482;350483;350484;350485 277751;277752;277753;277754;277755;277756;277757 277754 7 QLLIQQK Unmodified 869.53345 0.53345218 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 40.214 34.368 2 0.024901 44741 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.47 39.976 116950000 34086000 82862000 0 0 0 0 0 0 0 0 0 0 0 0 0 42034 2495 37605 350486;350487 277758;277759 277758 1 QLLLQQQTSGLK Unmodified 1355.7773 0.77726428 283 O15409 FOXP2 Forkhead box protein P2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 59.019 59.215 2 0.00031289 67462 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 82.287 33.493 29201000 0 0 0 0 0 3324400 3769000 4986100 2045200 4137500 0 4252000 2871200 3815700 0 42035 283 37606 350488;350489;350490;350491;350492;350493;350494;350495;350496 277760;277761;277762;277763;277764;277765;277766 277761 7 QLLLSFK Unmodified 847.51674 0.51673948 1974 P78344 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 75.288 75.327 2 0.031973 86093 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.324 22.785 139660000 0 0 0 5617300 6934400 22059000 10648000 11259000 18425000 13555000 13058000 0 0 13682000 24419000 42036 1974 37607 350497;350498;350499;350500;350501;350502;350503;350504;350505;350506 277767 277767 1 QLLLSFKPVMQK Oxidation (M) 1446.8269 0.82685701 1974 P78344 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 73.244 73.188 3 0.0011663 84181 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 60.509 49.41 157980000 0 0 0 17613000 14007000 35256000 0 0 0 34779000 0 0 0 19067000 37257000 42037 1974 37608 350507;350508;350509;350510;350511;350512 277768;277769;277770 277768 3174 3 QLLLSFKPVMQK Unmodified 1430.8319 0.83194239 1974 P78344 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 78.988 79.132 3 0.003857 91264 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 42.809 33.276 67965000 0 0 0 0 0 5080600 2358700 9278200 5325300 3351500 2804500 6338900 3804600 3801600 25821000 42038 1974 37608 350513;350514;350515;350516;350517;350518;350519;350520;350521;350522 277771;277772;277773 277773 3 QLLLSTSMDRDVK Unmodified 1504.7919 0.79192806 3518 Q8TEQ6 GEMIN5 Gem-associated protein 5 yes yes 0 0 1 By MS/MS 2 0 1 1 70.871 62.605 2 0.02348 83288 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.067 57.495 5167100 5167100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42039 3518 37609 350523 277774 277774 1 QLLLTADDR Unmodified 1043.5611 0.56112349 771 P04075 ALDOA Fructose-bisphosphate aldolase A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 50.025 50.545 2 0.0075836 56570 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 72.042 3.557 352560000 0 0 0 0 0 0 0 0 0 0 65148000 46340000 0 40712000 200360000 42040 771 37610 350524;350525;350526;350527 277775;277776;277777;277778;277779;277780 277779 6 QLLLTPNAVVIVEDAK Unmodified 1721.9927 0.99273636 121 O00159 MYO1C Unconventional myosin-Ic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 90.213 90.323 2 8.8769E-05 104922 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 89.283 75.62 24281000 0 0 0 0 1265200 1541700 1187900 1686800 1840400 4756300 2733000 3922800 0 1246800 4100100 42041 121 37611 350528;350529;350530;350531;350532;350533;350534;350535;350536;350537 277781;277782;277783;277784;277785;277786;277787;277788;277789 277785 9 QLLMLQSLE Oxidation (M) 1089.574 0.57399637 1725 P53680 AP2S1 AP-2 complex subunit sigma yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 84.355 84.046 2 0.0019922 97237 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 91.626 65.024 147760000 0 33078000 0 6064600 9160000 12163000 12378000 9187200 9559200 11736000 11372000 12296000 7682800 6111900 6977200 42042 1725 37612 350538;350539;350540;350541;350542;350543;350544;350545;350546;350547;350548;350549;350550 277790;277791;277792;277793;277794;277795;277796;277797;277798;277799;277800;277801;277802;277803 277796 2804 12 QLLPCEMACNEK Oxidation (M) 1507.6469 0.64692009 4591 Q9NR45 NANS Sialic acid synthase yes yes 0 1 0 By matching By MS/MS 2.33 0.471 2 1 1 2 46.132 40.212 2 0.0011336 52411 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.056 78.734 57874000 3068600 54806000 0 0 0 0 0 0 0 0 0 0 0 0 0 42043 4591 37613 350551;350552;350553 277804;277805;277806 277804 5993 3 QLLPCEMACNEK Unmodified 1491.652 0.65200546 4591 Q9NR45 NANS Sialic acid synthase yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 61.551 55.236 2 0.004731 71039 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.549 83.745 518130000 6238800 511890000 0 0 0 0 0 0 0 0 0 0 0 0 0 42044 4591 37613 350554;350555;350556 277807;277808;277809 277807 3 QLLPLLEK Unmodified 952.59572 0.59571809 4284 Q9C0B7 TANGO6 Transport and Golgi organization protein 6 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 84.751 79.629 2 0.031244 100354 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.213 25.854 38691000 23972000 12524000 2194600 0 0 0 0 0 0 0 0 0 0 0 0 42045 4284 37614 350557;350558;350559 277810;277811 277810 2 QLLQANPILEAFGNAK Unmodified 1725.9414 0.94136949 1356;1366;3090 P35579;Q7Z406;P35749 MYH9;MYH14;MYH11 Myosin-9;Myosin-14;Myosin-11 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 1 2 2 2 2 2 2 2 2 2 2 2 92.47 92.56 2;3 1.1898E-268 107487 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 248.05 227.84 649660000 0 0 0 9873800 30327000 42964000 27724000 46369000 43171000 111920000 67888000 54569000 16926000 30682000 167240000 42046 1356;3090;1366 37615 350560;350561;350562;350563;350564;350565;350566;350567;350568;350569;350570;350571;350572;350573;350574;350575;350576;350577;350578;350579;350580;350581;350582 277812;277813;277814;277815;277816;277817;277818;277819;277820;277821;277822;277823;277824;277825;277826;277827;277828;277829;277830;277831;277832 277814 21 QLLQANPILESFGNAK Unmodified 1741.9363 0.93628412 1357 P35580 MYH10 Myosin-10 yes yes 0 0 0 By matching By MS/MS By matching By matching 10 0 4 1 1 1 1 87.813 87.942 2 0.010667 102063 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 48.004 22.065 6054400 0 0 0 0 0 1004900 0 0 0 1334700 1909900 0 0 0 1805000 42047 1357 37616 350583;350584;350585;350586 277833 277833 1 QLLQEQESVK Unmodified 1200.635 0.63501672 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.183 35.365 2 9.0828E-07 39055 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 150.36 73.304 637780000 0 0 0 98460000 28517000 38697000 37965000 161660000 19290000 39463000 41827000 62708000 57428000 26764000 25001000 42048 1029 37617 350587;350588;350589;350590;350591;350592;350593;350594;350595;350596;350597;350598 277834;277835;277836;277837;277838;277839;277840;277841;277842;277843;277844;277845 277840 10 QLLQNPPAGVDPIIWEQAK Unmodified 2116.1317 0.13168946 3081 Q7Z3B4 NUP54 Nucleoporin p54 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 87.512 87.641 3 0.039139 101388 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 23.027 12.927 4745500 0 0 0 0 0 0 0 0 0 2326900 0 0 0 0 2418700 42049 3081 37618 350599;350600 277846 277846 1 QLLQSAHK Unmodified 923.51886 0.51886475 2875 Q6FI81 CIAPIN1 Anamorsin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 15.949 12.595 2 0.012181 18671 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.75 49.242 487680000 392700000 38210000 56773000 0 0 0 0 0 0 0 0 0 0 0 0 42050 2875 37619 350601;350602;350603;350604 277847;277848;277849;277850 277849 3 QLLSDYGPPSLGYTQGTGNSQVPQSK Unmodified 2721.3246 0.3245882 184 O14519 CDK2AP1 Cyclin-dependent kinase 2-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 78.132 78.238 3 1.1375E-62 90426 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 114.62 106.91 131710000 0 0 0 0 13457000 15147000 8300200 10664000 9715000 21847000 13371000 14918000 6797300 0 17495000 42051 184 37620 350605;350606;350607;350608;350609;350610;350611;350612;350613;350614 277851;277852;277853;277854;277855;277856;277857;277858;277859 277852 9 QLLSEEEK Unmodified 974.49204 0.49204087 1331 P33981 TTK Dual specificity protein kinase TTK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 24.878 24.908 2 0.028474 26738 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 56.721 34.59 103720000 0 0 0 11164000 12240000 14654000 17275000 13208000 13289000 15810000 0 0 0 6075500 0 42052 1331 37621 350615;350616;350617;350618;350619;350620;350621;350622 277860;277861 277860 2 QLLSLAANGIQR Unmodified 1282.7357 0.73573382 4192 Q9BVL2 NUPL1 Nucleoporin p58/p45 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 72.179 72.309 2 2.263E-08 83047 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 134.25 64.422 94879000 0 0 0 0 5854400 9909300 7891700 16230000 5262200 7567200 8336300 10878000 5912000 7217500 9820800 42053 4192 37622 350623;350624;350625;350626;350627;350628;350629;350630;350631;350632;350633 277862;277863;277864;277865;277866;277867;277868 277862 7 QLLSNELLLTQMEK Unmodified 1658.8913 0.89130776 4491 Q9HAV4 XPO5 Exportin-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 90.884 85.722 2 0.00085598 108158 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.346 48.881 102000000 10858000 88399000 2747500 0 0 0 0 0 0 0 0 0 0 0 0 42054 4491 37623 350634;350635;350636 277869;277870 277869 2 QLLSNELLLTQMEK Oxidation (M) 1674.8862 0.88622238 4491 Q9HAV4 XPO5 Exportin-5 yes yes 0 1 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 83.125 79.623 2 0.0077415 99162 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.611 48.568 69269000 0 64318000 4951600 0 0 0 0 0 0 0 0 0 0 0 0 42055 4491 37623 350637;350638;350639 277871;277872;277873 277871 5929 2 QLLSNQPLTK Unmodified 1140.6503 0.65027285 3017 Q6ZUT9 DENND5B DENN domain-containing protein 5B yes yes 0 0 0 By MS/MS 2 0 1 1 51.72 45.947 2 0.0054445 59646 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.67 21.406 13362000 0 13362000 0 0 0 0 0 0 0 0 0 0 0 0 0 42056 3017 37624 350640 277874 277874 1 QLLSQMEEK Unmodified 1104.5485 0.5485099 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 42.782 42.98 2 0.01033 47789 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 64.485 29.127 19686000 0 0 0 0 0 0 3129200 3418200 2806900 3248800 7082700 0 0 0 0 42057 2291 37625 350641;350642;350643;350644;350645;350646 277875;277876;277877 277875 3 QLLSYITK Unmodified 964.55933 0.55933258 2476 Q15021 NCAPD2 Condensin complex subunit 1 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.219 64.31 2 0.033369 72601 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.753 25.918 87571000 0 0 0 3802500 4755200 7248300 5991300 5058900 3862000 10120000 8190800 12153000 4811400 6402900 15174000 42058 2476 37626 350647;350648;350649;350650;350651;350652;350653;350654;350655;350656;350657;350658 277878 277878 1 QLLTERTLK Unmodified 1100.6554 0.65535823 455 O75116 ROCK2 Rho-associated protein kinase 2 yes yes 0 0 1 By MS/MS 2 0 1 1 45.181 38.189 2 0.0089288 52598 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107 42.794 23708000 23708000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42059 455 37627 350659 277879 277879 0 QLLTLSSELSQARDENK Unmodified 1930.996 0.99598384 1017 P15311 EZR Ezrin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.947 71.021 3 5.637E-14 80955 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 114.29 98.169 190280000 0 0 0 2677100 3259000 11195000 4098600 5727700 7096000 10212000 20497000 19083000 6179400 17359000 82897000 42060 1017 37628 350660;350661;350662;350663;350664;350665;350666;350667;350668;350669;350670;350671 277880;277881;277882;277883;277884;277885;277886;277887 277886 7 QLLTPATGAPKPQGTK Unmodified 1606.9043 0.90425571 671 O95602 POLR1A DNA-directed RNA polymerase I subunit RPA1 yes yes 0 0 1 By MS/MS 2 0 1 1 49.226 41.401 3 0.01935 57273 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 35.473 26.17 10692000 10692000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42061 671 37629 350672 277888 277888 1 QLLVQQLGLTEK Unmodified 1368.7977 0.79766537 4778 Q9NZN5 ARHGEF12 Rho guanine nucleotide exchange factor 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 79.453 79.098 2 0.0046222 91355 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 72.321 55.781 66901000 0 16840000 0 1918100 0 5371800 3227900 4146100 0 5265900 6279500 7365500 3938900 2826900 9720900 42062 4778 37630 350673;350674;350675;350676;350677;350678;350679;350680;350681;350682;350683 277889;277890;277891;277892;277893;277894;277895;277896 277890 8 QLLYDAIK Unmodified 962.54368 0.54368251 4751 Q9NYU2 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 62.43 62.516 2 0.017183 70387 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.073 8.8956 64614000 0 0 0 4148100 4096400 8454300 0 0 2627100 5680700 8007600 8404800 4257500 5761900 13175000 42063 4751 37631 350684;350685;350686;350687;350688;350689;350690;350691;350692;350693 277897;277898;277899;277900;277901 277897 5 QLLYLEK Unmodified 905.52222 0.52221879 2218;3710 Q12974;Q93096 PTP4A2;PTP4A1 Protein tyrosine phosphatase type IVA 2;Protein tyrosine phosphatase type IVA 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 57.187 57.308 2 0.023334 64823 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 90.777 27.798 729540000 0 0 0 47981000 56427000 62099000 55593000 52602000 47767000 63154000 78136000 87158000 54565000 42823000 81238000 42064 2218;3710 37632 350694;350695;350696;350697;350698;350699;350700;350701;350702;350703;350704;350705 277902;277903;277904;277905 277904 4 QLMEQDASSSPSAQVIGLK Unmodified 1987.9885 0.98845562 4401 Q9H4L5 OSBPL3 Oxysterol-binding protein-related protein 3 yes yes 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 71.788 71.853 2 0.0026023 82789 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 52.555 37.016 8065400 0 0 0 0 0 2911200 0 0 0 3464000 0 0 1690200 0 0 42065 4401 37633 350706;350707;350708 277906 277906 1 QLMETPANEMTPTR Unmodified 1617.7491 0.74907697 1240 P28838 LAP3 Cytosol aminopeptidase yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 55.443 55.957 2 0.015977 62715 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.915 19.401 8847900 0 0 0 0 0 0 0 0 0 0 1822600 0 0 0 7025300 42066 1240 37634 350709;350710 277907 277907 1 QLMEVTGK Unmodified 904.4688 0.46880301 2779 Q5T6F2 UBAP2 Ubiquitin-associated protein 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 30.83 31.087 2 0.033141 33650 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 53.891 8.0086 62416000 0 0 0 0 0 4148100 742330 3331400 5079800 7958400 13122000 0 7007500 8397000 12630000 42067 2779 37635 350711;350712;350713;350714;350715;350716;350717;350718;350719 277908 277908 1 QLMPPPAFPVTGIK Oxidation (M) 1510.8218 0.82177163 3123 Q7Z7F0 KIAA0907 UPF0469 protein KIAA0907 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 80.895 80.878 2 0.0011052 93608 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 56.094 44.562 16844000 0 0 0 2330900 3015800 0 0 3003200 2892300 3023400 0 0 0 2577900 0 42068 3123 37636 350720;350721;350722;350723;350724;350725 277909;277910;277911 277909 4746 3 QLMVAMPLLPVPS Unmodified 1394.7666 0.76656494 4700 Q9NWS0 PIH1D1 PIH1 domain-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 100.86 96.142 2 0.015429 118839 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.568 61.086 4243400 0 4243400 0 0 0 0 0 0 0 0 0 0 0 0 0 42069 4700 37637 350726 277912 277912 1 QLNAIESTK Unmodified 1002.5346 0.53457439 3631 Q92576 PHF3 PHD finger protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 24.586 24.833 2 0.0052093 25747 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 80.219 33.225 73431000 0 0 0 0 4723800 5767400 7148700 0 5478900 7041500 7241800 10144000 7859100 6845200 11180000 42070 3631 37638 350727;350728;350729;350730;350731;350732;350733;350734;350735;350736 277913;277914;277915;277916;277917;277918;277919;277920;277921 277918 9 QLNAIRDNIK Unmodified 1183.6673 0.6673199 3988 Q96SB8 SMC6 Structural maintenance of chromosomes protein 6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 17.625 17.658 3 0.039806 18265 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 28.958 5.5852 58614000 0 0 0 0 8976800 9749400 11447000 11841000 9079000 7520900 0 0 0 0 0 42071 3988 37639 350737;350738;350739;350740;350741;350742 277922 277922 1 QLNALNK Unmodified 799.4552 0.45520186 999 P14550 AKR1A1 Alcohol dehydrogenase [NADP(+)] yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 20.607 17.393 2 0.047334 22582 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.748 9.8598 349800000 0 344930000 4865100 0 0 0 0 0 0 0 0 0 0 0 0 42072 999 37640 350743;350744 277923 277923 1 QLNENQVR Unmodified 999.50976 0.50975662 1906 P62714 PPP2CB Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 14.176 14.234 2 0.022426 13624 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 92.491 46.47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42073 1906 37641 350745;350746 277924;277925 277925 2 QLNFLTK Unmodified 862.49125 0.49125301 2284 Q13418 ILK Integrin-linked protein kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.935 57.059 2 0.026078 64935 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 79.469 32.702 298910000 0 0 0 24038000 16168000 38251000 20860000 17248000 17460000 26510000 29500000 36725000 20018000 21288000 30847000 42074 2284 37642 350747;350748;350749;350750;350751;350752;350753;350754;350755;350756;350757;350758 277926;277927;277928 277928 3 QLNHPNVIK Unmodified 1061.5982 0.5981777 3508 Q8TDX7 NEK7 Serine/threonine-protein kinase Nek7 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 30.686 26.188 2 0.011185 36820 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.265 1.6506 75848000 65221000 0 10626000 0 0 0 0 0 0 0 0 0 0 0 0 42075 3508 37643 350759;350760 277929 277929 1 QLNLENVVGDK Unmodified 1227.6459 0.64591575 380 O43929;CON__Q2YDI2 ORC4 Origin recognition complex subunit 4 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 2 1 1 1 1 1 67.201 67.319 2 0.00048861 77353 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 98.254 43.643 155710000 0 0 0 0 31734000 19750000 17224000 23488000 13425000 18799000 18363000 1774200 0 11151000 0 42076 380 37644 350761;350762;350763;350764;350765;350766;350767;350768;350769;350770;350771 277930;277931;277932;277933;277934;277935;277936 277931 5 QLNNLALLCQNQGK Unmodified 1612.8355 0.83552421 2143;4629 Q9NSK0;Q6P597;Q07866 KLC4;KLC3;KLC1 Kinesin light chain 4;Kinesin light chain 3;Kinesin light chain 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 69.275 69.548 2 0.020179 79907 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 58.978 34.596 17472000 0 0 0 0 0 3646400 0 0 0 0 4676600 4866800 0 0 4282400 42077 4629;2143 37645 350772;350773;350774;350775 277937;277938;277939 277938 1 QLNPINLTER Unmodified 1196.6513 0.65133548 155 O00442 RTCA RNA 3'-terminal phosphate cyclase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 13 1 1 1 2 1 1 1 2 1 1 1 58.381 58.524 2 0.021168 72754 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 46.819 21.682 412180000 0 0 0 67241000 9215100 24994000 59468000 39954000 0 21052000 16862000 54044000 96744000 12639000 9967800 42078 155 37646 350776;350777;350778;350779;350780;350781;350782;350783;350784;350785;350786;350787;350788 277940;277941 277940 2 QLNSESLSQWTNPSTMANAK Oxidation (M) 2222.0274 0.027360323 1383 P36952 SERPINB5 Serpin B5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.67 1.49 1 20 1 1 1 2 2 1 2 1 2 2 2 2 2 70.288 70.223 2;3 8.3167E-28 80784 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 98.592 90.982 146280000 0 23241000 0 6965600 3961500 18281000 8846400 4654600 11076000 3512700 10355000 18678000 8771300 8262200 19672000 42079 1383 37647 350789;350790;350791;350792;350793;350794;350795;350796;350797;350798;350799;350800;350801;350802;350803;350804;350805;350806;350807;350808;350809 277942;277943;277944;277945;277946 277942 2149 4 QLNSESLSQWTNPSTMANAK Unmodified 2206.0324 0.032445701 1383 P36952 SERPINB5 Serpin B5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.76 3.47 3 2 12 5 1 2 2 2 1 2 2 78.996 77.827 2;3 7.6341E-38 95207 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.859 78.958 714450000 0 579680000 0 2818700 0 19324000 0 10799000 0 19178000 9354500 0 0 21550000 51746000 42080 1383 37647 350810;350811;350812;350813;350814;350815;350816;350817;350818;350819;350820;350821;350822;350823;350824;350825;350826 277947;277948;277949;277950;277951;277952;277953 277949 6 QLNTALPQEFAALTK Unmodified 1643.8883 0.88827129 2239 Q13136 PPFIA1 Liprin-alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 86.277 86.377 2 0.00056421 100164 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 78.964 62.387 33969000 0 0 0 0 1624800 2813800 0 2990100 2682100 5018100 3638900 5223500 2478000 2798000 4702000 42081 2239 37648 350827;350828;350829;350830;350831;350832;350833;350834;350835;350836 277954;277955;277956;277957;277958 277955 5 QLNTDLELR Unmodified 1100.5826 0.58258722 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 55.092 55.301 2 0.013737 63027 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 59.35 17.062 28617000 0 0 0 2032800 0 0 2174700 2176200 0 0 3321700 5131600 0 5807200 7973100 42082 2495 37649 350837;350838;350839;350840;350841;350842;350843 277959;277960 277959 2 QLPAHDQDPSK Unmodified 1234.5942 0.59421454 4880 Q9UGI8 TES Testin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.96 3.45 6 1 20 2 3 2 2 1 2 2 1 2 2 2 2 2 2 11.44 10.696 2;3 1.9086E-06 13447 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.5 88.61 719870000 40895000 555700000 7132500 7001300 423220 6285900 9794000 5149800 4363800 9630100 0 18695000 7303600 14370000 33132000 42083 4880 37650 350844;350845;350846;350847;350848;350849;350850;350851;350852;350853;350854;350855;350856;350857;350858;350859;350860;350861;350862;350863;350864;350865;350866;350867;350868;350869;350870 277961;277962;277963;277964;277965;277966;277967;277968;277969 277963 6 QLPAPQDEEWASSDAQHGPQGK Unmodified 2375.0778 0.077815989 3226 Q8IVF2 AHNAK2 Protein AHNAK2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 54.207 54.407 3 6.4618E-10 61748 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 46.353 37.752 16045000 0 0 0 0 0 4117400 0 0 2144400 4868700 4914900 0 0 0 0 42084 3226 37651 350871;350872;350873;350874;350875 277970;277971;277972;277973;277974 277973 5 QLPAQPPEHAVDGEGFK Unmodified 1818.8901 0.89006221 2377 Q14151 SAFB2 Scaffold attachment factor B2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 53.526 53.674 3 0.0050104 60826 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.711 35.872 104330000 0 0 0 6270200 6018000 0 0 4513700 0 9586400 18188000 15378000 13857000 12171000 18342000 42085 2377 37652 350876;350877;350878;350879;350880;350881;350882;350883;350884;350885 277975;277976;277977;277978;277979;277980 277978 5 QLPGSMTIQK Unmodified 1101.5852 0.58522975 2582 Q15813 TBCE Tubulin-specific chaperone E yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 52.771 45.852 2 0.01508 60149 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.846 45.804 55922000 7132300 48790000 0 0 0 0 0 0 0 0 0 0 0 0 0 42086 2582 37653 350886;350887 277981 277981 1 QLPHFTSEHIK Unmodified 1335.6935 0.69353465 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 0 By MS/MS 2 0 1 1 53.898 45.835 3 0.019687 62897 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.083 34.705 34367000 34367000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42087 528 37654 350888 277982 277982 1 QLPLEPESPSGQVGPRPAPPQEESPSSEAK Unmodified 3124.5313 0.53128651 2667 Q3KQU3 MAP7D1 MAP7 domain-containing protein 1 yes yes 0 0 1 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 66.234 66.26 3 8.6063E-11 75962 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 38.537 35.196 46170000 0 0 0 5449800 4797800 0 4809000 0 2805700 0 6587200 8695200 5474700 7550900 0 42088 2667 37655 350889;350890;350891;350892;350893;350894;350895;350896 277983;277984;277985;277986 277984 4 QLPLTSICLETDSPALGPEK Unmodified 2168.1035 0.10348538 2643 Q17R31 TATDN3 Putative deoxyribonuclease TATDN3 yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 90.681 86.337 2;3 3.1635E-58 107332 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 135.47 121.22 57792000 0 57792000 0 0 0 0 0 0 0 0 0 0 0 0 0 42089 2643 37656 350897;350898;350899 277987;277988 277987 2 QLPPNGDPNFK Unmodified 1225.6091 0.60913632 3690 Q92945 KHSRP Far upstream element-binding protein 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 41.716 42.11 2 0.0029539 46993 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 65.305 31.509 48279000 0 0 0 0 0 0 6160300 0 4397600 0 0 15096000 0 6940600 15684000 42090 3690 37657 350900;350901;350902;350903;350904;350905 277989;277990;277991;277992;277993;277994;277995 277991 7 QLPQLTSLELQYVSPK Unmodified 1843.0091 0.0091147084 1454 P42345 MTOR Serine/threonine-protein kinase mTOR yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 88.842 88.97 2 0.024305 103201 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 30.889 18.122 2649000 0 0 0 0 0 0 0 0 0 1324200 0 0 0 0 1324700 42091 1454 37658 350906;350907 277996 277996 1 QLPSAGPDK Unmodified 911.47125 0.47124585 365 O43768 ENSA Alpha-endosulfine yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 6.57 3.96 3 4 1 1 1 1 1 1 1 20.35 18.506 2 0.011616 18536 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 62.546 50.015 586130000 30511000 533860000 4629800 0 0 0 2755100 0 1623900 0 0 0 0 12753000 0 42092 365 37659 350908;350909;350910;350911;350912;350913;350914 277997;277998;277999 277999 3 QLPSGGLNGRPEK Unmodified 1351.7208 0.72081203 1719 P53611 RABGGTB Geranylgeranyl transferase type-2 subunit beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 28.507 28.665 3 0.041235 29920 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.799 23.422 73846000 0 0 0 0 3213500 8021400 5614300 6381600 3400100 8021100 19193000 0 0 0 20001000 42093 1719 37660 350915;350916;350917;350918;350919;350920;350921;350922 278000 278000 0 QLPTAAPDK Unmodified 939.50255 0.50254598 1780 P56211 ARPP19 cAMP-regulated phosphoprotein 19 yes yes 0 0 0 By MS/MS By MS/MS 2.67 0.471 1 2 1 2 28.332 23.834 2 0.028108 31127 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.224 46.923 167550000 252890 167290000 0 0 0 0 0 0 0 0 0 0 0 0 0 42094 1780 37661 350923;350924;350925 278001;278002 278001 2 QLPVLEPGDK Unmodified 1094.5972 0.59717465 3117 Q7Z6M1 RABEPK Rab9 effector protein with kelch motifs yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 60.941 55.603 2 0.043275 71469 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 53.751 34.494 42130000 0 42130000 0 0 0 0 0 0 0 0 0 0 0 0 0 42095 3117 37662 350926;350927 278003 278003 1 QLQAETEPIVK Unmodified 1254.682 0.68196691 1809 P60228 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 45.388 44.122 2 4.4418E-09 59011 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 130.75 75.072 689810000 13427000 314200000 1117000 23882000 21042000 30728000 23281000 21331000 21370000 36195000 39257000 40036000 30733000 32689000 40518000 42096 1809 37663 350928;350929;350930;350931;350932;350933;350934;350935;350936;350937;350938;350939;350940;350941;350942;350943 278004;278005;278006;278007;278008;278009;278010;278011;278012;278013;278014;278015;278016;278017;278018;278019;278020;278021 278009 16 QLQAIEFNK Unmodified 1089.5819 0.58185893 578 O76094 SRP72 Signal recognition particle subunit SRP72 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55.291 54.114 2 7.0758E-06 62315 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 155.88 98.065 534520000 5573300 80831000 2879400 38465000 28527000 35242000 44761000 50872000 28304000 45381000 42134000 54430000 35438000 0 41684000 42097 578 37664 350944;350945;350946;350947;350948;350949;350950;350951;350952;350953;350954;350955;350956;350957;350958 278022;278023;278024;278025;278026;278027;278028;278029;278030;278031;278032;278033;278034;278035;278036;278037;278038;278039 278039 18 QLQALSSELAQARDETK Unmodified 1886.9698 0.96976909 1345 P35241 RDX Radixin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 6.8 3.92 4 6 1 1 2 1 1 1 1 1 1 68.309 66.449 3 2.5284E-09 87760 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 103.5 103.5 200160000 36876000 36955000 64139000 0 0 2470900 2685000 0 0 2926300 12416000 12326000 0 0 29370000 42098 1345 37665 350959;350960;350961;350962;350963;350964;350965;350966;350967;350968 278040;278041;278042;278043;278044;278045;278046 278042 5 QLQDELEMLVER Oxidation (M) 1517.7396 0.73955814 2252 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 85.513 85.59 2 2.546E-05 99154 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 90.827 65.951 34159000 0 0 0 0 2512000 0 0 0 0 10066000 7577000 6530500 0 0 7473100 42099 2252 37666 350969;350970;350971;350972;350973;350974 278047;278048;278049;278050;278051;278052 278048 3670 6 QLQDELEMLVERLGEK Oxidation (M) 1944.9826 0.98264196 2252 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 0 1 1 By MS/MS 3 0 2 2 98.202 94.873 3 0.0020734 113875 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 56.872 35.338 13914000 0 13914000 0 0 0 0 0 0 0 0 0 0 0 0 0 42100 2252 37667 350975;350976 278053;278054 278054 3670 2 QLQDEMLR Oxidation (M) 1047.5019 0.50189405 757 P02545 LMNA Prelamin-A/C;Lamin-A/C yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 25.261 25.507 2 0.0042943 27559 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 100.19 37.474 90546000 0 0 0 0 5810700 8809900 8995400 0 6995300 9170600 8867300 10587000 6899900 7953700 16457000 42101 757 37668 350977;350978;350979;350980;350981;350982;350983;350984;350985;350986;350987 278055;278056;278057;278058;278059;278060;278061;278062;278063;278064 278055 911 10 QLQDEMLR Unmodified 1031.507 0.50697943 757 P02545 LMNA Prelamin-A/C;Lamin-A/C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.007 43.182 2 0.0052025 48598 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 143.85 60.239 371430000 0 0 0 47237000 15373000 22804000 17543000 28505000 11896000 31576000 46276000 40728000 26697000 25594000 57201000 42102 757 37668 350988;350989;350990;350991;350992;350993;350994;350995;350996;350997;350998;350999 278065;278066;278067;278068;278069;278070;278071 278065 7 QLQDIATLADQR Unmodified 1370.7154 0.7153923 649 O95373 IPO7 Importin-7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 67.008 67.073 2 1.3367E-05 77125 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 124.1 80.821 75401000 0 0 0 3926800 3689400 9310900 4536600 4077600 5046000 10006000 8796000 11179000 0 0 14833000 42103 649 37669 351000;351001;351002;351003;351004;351005;351006;351007;351008;351009 278072;278073;278074;278075;278076;278077;278078;278079;278080;278081 278072 7 QLQDIATLADQRR Unmodified 1526.8165 0.81650333 649 O95373 IPO7 Importin-7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 1 2 2 2 2 2 2 2 2 2 2 59.664 59.801 2;3 4.0383E-10 67884 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 116.54 83.481 660090000 0 0 0 40041000 25252000 67068000 39760000 36533000 29305000 71483000 66250000 76989000 52018000 56220000 99167000 42104 649 37670 351010;351011;351012;351013;351014;351015;351016;351017;351018;351019;351020;351021;351022;351023;351024;351025;351026;351027;351028;351029;351030;351031;351032 278082;278083;278084;278085;278086;278087;278088;278089;278090;278091;278092;278093;278094;278095;278096 278086 14 QLQEDAAR Unmodified 929.45666 0.45665842 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 9.2724 9.4615 2 0.0091721 6870 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 83.753 18.08 18460000 0 0 0 0 0 5327200 0 0 1984100 0 6787100 4361900 0 0 0 42105 2047 37671 351033;351034;351035;351036 278097;278098 278097 2 QLQEEDLK Unmodified 1001.5029 0.50293991 3230 Q8IVM0 CCDC50 Coiled-coil domain-containing protein 50 yes yes 0 0 0 By MS/MS 2 0 1 1 27.989 23.684 2 0.018072 31150 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.296 13.161 16043000 0 16043000 0 0 0 0 0 0 0 0 0 0 0 0 0 42106 3230 37672 351037 278099 278099 1 QLQEELAEHQVPVEK Unmodified 1775.9054 0.90537792 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 60.276 54.928 3 0.0027595 70951 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 46.318 28.69 28994000 0 28994000 0 0 0 0 0 0 0 0 0 0 0 0 0 42107 5049 37673 351038;351039 278100 278100 1 QLQEERPELSESELTR Unmodified 1942.9596 0.95959833 1053 P17480 UBTF Nucleolar transcription factor 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 54.097 54.185 3 2.8214E-31 61309 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 125.52 115.77 602510000 0 0 0 51778000 50351000 58179000 47520000 46156000 39180000 49393000 69204000 142840000 45483000 2427100 0 42108 1053 37674 351040;351041;351042;351043;351044;351045;351046;351047;351048;351049;351050 278101;278102;278103;278104;278105;278106;278107;278108;278109;278110;278111;278112;278113;278114 278109 14 QLQEIFENYK Unmodified 1310.6507 0.65066678 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71.603 71.11 2 0.0014908 80955 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 114.2 101.67 167690000 0 36816000 2090800 4507700 4377600 10714000 7449800 6006800 8457400 14178000 11453000 11905000 14133000 9814500 25791000 42109 965 37675 351051;351052;351053;351054;351055;351056;351057;351058;351059;351060;351061;351062;351063;351064 278115;278116;278117;278118;278119;278120;278121;278122;278123;278124;278125;278126;278127 278119 13 QLQERAGVK Unmodified 1027.5774 0.57744226 3690;3737 Q92945;Q96AE4 KHSRP;FUBP1 Far upstream element-binding protein 2;Far upstream element-binding protein 1 no no 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 12.289 9.1086 2 0.00091561 12379 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 180.03 97.358 2414300000 2034000000 126070000 254190000 0 0 0 0 0 0 0 0 0 0 0 0 42110 3690;3737 37676 351065;351066;351067 278128;278129;278130 278128 2 QLQEREAGAEEK Unmodified 1386.6739 0.67392142 5278 Q9Y6D9 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes yes 0 0 1 By MS/MS 10 0 1 1 7.7077 8.0667 3 0.038321 6066 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 29.809 12.07 9979700 0 0 0 0 0 0 0 0 0 0 9979700 0 0 0 0 42111 5278 37677 351068 278131 278131 1 QLQERTGVK Unmodified 1057.588 0.58800695 3873 Q96I24 FUBP3 Far upstream element-binding protein 3 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 11.441 8.3436 2 0.0076686 12896 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 131.41 31.018 30015000 24700000 0 5314300 0 0 0 0 0 0 0 0 0 0 0 0 42112 3873 37678 351069;351070 278132 278132 0 QLQFYTEAAR Unmodified 1225.6091 0.60913632 2921 Q6P1N0 CC2D1A Coiled-coil and C2 domain-containing protein 1A yes yes 0 0 0 By MS/MS 10 0 1 1 55.364 55.988 2 0.011912 62700 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.404 23.056 5332500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5332500 42113 2921 37679 351071 278133 278133 1 QLQGFPFYGK Unmodified 1183.6026 0.60259438 866 P08579 SNRPB2 U2 small nuclear ribonucleoprotein B'' yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.934 77.022 2 0.0020368 88718 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 86.833 78.369 228860000 0 0 0 8132900 0 14475000 0 19183000 15761000 0 23591000 36438000 21202000 29700000 60374000 42114 866 37680 351072;351073;351074;351075;351076;351077;351078;351079;351080;351081;351082 278134;278135;278136;278137;278138;278139;278140;278141;278142;278143;278144 278139 10 QLQGIQIQEAETRDQVK Unmodified 1983.0385 0.038517356 2510 Q15276 RABEP1 Rab GTPase-binding effector protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 58.95 55.148 3 4.004E-05 68663 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 89.506 73.143 8821300 0 0 8821300 0 0 0 0 0 0 0 0 0 0 0 0 42115 2510 37681 351083 278145 278145 1 QLQGPEK Unmodified 798.42357 0.42356738 421 O60664 PLIN3 Perilipin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.33 3.77 4 8 1 2 1 1 1 1 1 1 1 1 1 9.4986 8.5461 2 0.020737 10455 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 111.65 32.195 640190000 30692000 418220000 2455900 22680000 0 0 30023000 31670000 23143000 15865000 0 28895000 0 14554000 21991000 42116 421 37682 351084;351085;351086;351087;351088;351089;351090;351091;351092;351093;351094;351095 278146;278147;278148;278149;278150;278151;278152 278147 7 QLQGPEKEPPKPEQVESR Unmodified 2075.0647 0.064732107 421 O60664 PLIN3 Perilipin-3 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 2 2 2 2 1 1 2 1 2 1 2 32.3 32.476 3;4 0.006413 35218 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 34.649 27.875 135810000 0 0 0 14584000 17426000 0 19599000 19658000 2972100 5041000 14085000 18391000 9792200 4420700 9843900 42117 421 37683 351096;351097;351098;351099;351100;351101;351102;351103;351104;351105;351106;351107;351108;351109;351110;351111;351112;351113 278153;278154;278155 278153 3 QLQLAQEAAQK Unmodified 1226.6619 0.66190017 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 39.018 39.003 2 0.00028442 43637 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 104.01 67.457 48061000 0 0 0 14227000 7929200 0 0 7925100 0 0 0 17980000 0 0 0 42118 2501 37684 351114;351115;351116;351117 278156;278157;278158;278159 278159 3 QLQLEAEEQRK Unmodified 1370.7154 0.7153923 3314 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.78 29.971 3 0.00015489 32496 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 83.862 55.154 116270000 0 0 0 7563200 4773100 11017000 8255300 6711400 4905700 6908200 12939000 15228000 9332600 8417600 20224000 42119 3314 37685 351118;351119;351120;351121;351122;351123;351124;351125;351126;351127;351128;351129 278160;278161;278162;278163;278164;278165;278166 278161 6 QLQLITSLK Unmodified 1042.6386 0.63864553 6 A0MZ66 KIAA1598 Shootin-1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75.576 74.512 2 0.00053306 93993 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.72 51.582 210850000 87098000 52025000 2234300 3690800 4668100 3794400 5604800 0 4169200 6598700 9935800 6979000 4937200 5704300 13414000 42120 6 37686 351130;351131;351132;351133;351134;351135;351136;351137;351138;351139;351140;351141;351142;351143;351144 278167;278168;278169;278170;278171;278172;278173;278174;278175;278176;278177;278178;278179;278180;278181 278170 15 QLQLYEIHGAQK Unmodified 1426.7569 0.75686319 2113 Q05209 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.8 3.92 2 3 1 1 1 1 1 55.135 52.946 3 0.011613 58883 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 41.598 35.458 121110000 45554000 0 15607000 0 0 0 0 0 0 18615000 0 0 18980000 0 22356000 42121 2113 37687 351145;351146;351147;351148;351149 278182;278183;278184;278185 278182 2 QLQNIIQATSR Unmodified 1270.6993 0.69934831 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.016 56.142 2 2.4237E-08 63658 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 157.66 75.211 757060000 0 0 0 165970000 39033000 40183000 42586000 187970000 19786000 38503000 45258000 73997000 54941000 19838000 28991000 42122 1029 37688 351150;351151;351152;351153;351154;351155;351156;351157;351158;351159;351160;351161 278186;278187;278188;278189;278190;278191;278192;278193;278194;278195;278196;278197;278198;278199;278200 278190 11 QLQNISLAAASGGAK Unmodified 1427.7732 0.77324153 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 58.069 56.902 2 5.3235E-10 75473 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 133.07 68.805 457710000 10717000 217230000 0 16822000 12833000 24797000 14621000 16302000 12715000 19339000 18824000 24932000 14889000 20662000 33025000 42123 2392 37689 351162;351163;351164;351165;351166;351167;351168;351169;351170;351171;351172;351173;351174;351175;351176 278201;278202;278203;278204;278205;278206;278207;278208;278209 278203 9 QLQNYLR Unmodified 933.50321 0.50321468 3517 Q8TEQ0 SNX29 Sorting nexin-29 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 41.705 41.789 2 0.03857 46719 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 69.432 30.214 44333000 0 0 0 2858400 4258500 4961200 5248900 7564800 3593800 4065500 6625200 0 0 0 5156300 42124 3517 37690 351177;351178;351179;351180;351181;351182;351183;351184;351185 278210 278210 1 QLQPAPPLAPQGR Unmodified 1371.7623 0.76228292 5203 Q9Y4H2 IRS2 Insulin receptor substrate 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 53.842 53.472 2 0.0057135 61383 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 68.371 57.541 13225000 0 0 0 4581600 3273800 0 5369600 0 0 0 0 0 0 0 0 42125 5203 37691 351186;351187;351188 278211;278212;278213 278212 3 QLQQAQAAGAEQEVEK Unmodified 1726.8486 0.84859132 1405 P39748 FEN1 Flap endonuclease 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.41 3.11 4 2 23 2 4 2 1 2 2 2 2 2 2 2 2 2 2 35.401 34.456 2;3 4.5702E-113 38513 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 236.61 212.27 1390700000 30590000 29253000 0 78462000 21267000 173120000 93930000 64068000 73972000 147090000 131910000 165240000 113330000 78312000 190200000 42126 1405 37692 351189;351190;351191;351192;351193;351194;351195;351196;351197;351198;351199;351200;351201;351202;351203;351204;351205;351206;351207;351208;351209;351210;351211;351212;351213;351214;351215;351216;351217 278214;278215;278216;278217;278218;278219;278220;278221;278222;278223;278224;278225;278226;278227;278228;278229;278230;278231;278232;278233;278234;278235;278236 278215 22 QLQQELEAFR Unmodified 1260.6463 0.64625011 4386 Q9H3S7 PTPN23 Tyrosine-protein phosphatase non-receptor type 23 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 82.515 82.655 2 0.026694 95443 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 53.166 19.37 124130000 0 0 0 0 0 5978300 4496600 3945000 8173400 12368000 13165000 15282000 10338000 15674000 34708000 42127 4386 37693 351218;351219;351220;351221;351222;351223;351224;351225;351226;351227 278237 278237 1 QLQQGLAK Unmodified 884.50797 0.50796571 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 17.342 17.493 2 0.015305 17700 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 69.093 28.241 36499000 0 0 0 2845000 3332200 3446400 3372300 0 2259100 0 4529400 0 4826700 4386500 7501700 42128 5189 37694 351228;351229;351230;351231;351232;351233;351234;351235;351236 278238;278239;278240;278241;278242;278243 278238 6 QLQQLEK Unmodified 885.49198 0.4919813 4630 Q9NSV4 DIAPH3 Protein diaphanous homolog 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 20.013 20.292 2 1.6954E-06 19646 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 153.15 20.188 143510000 0 0 0 0 0 0 14893000 13299000 10238000 22838000 22366000 24000000 17075000 18801000 0 42129 4630 37695 351237;351238;351239;351240;351241;351242;351243;351244;351245 278244;278245;278246;278247;278248;278249;278250;278251 278246 6 QLQQLQQLR Unmodified 1153.6568 0.65675521 312 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 48.212 48.535 2 0.0064509 54808 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 90.777 69.329 58605000 0 0 0 0 0 4073400 5045800 4390200 0 6501100 8604500 9931500 6533300 5362900 8162500 42130 312 37696 351246;351247;351248;351249;351250;351251;351252;351253;351254 278252;278253;278254;278255 278254 4 QLQQQREEK Unmodified 1185.6102 0.61019895 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 1 By MS/MS 2 0 1 1 5.6406 3.4355 2 0.007042 5007 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 121.05 60.612 14036000 0 0 14036000 0 0 0 0 0 0 0 0 0 0 0 0 42131 2495 37697 351255 278256 278256 1 QLQQVEER Unmodified 1028.5251 0.52507234 3065 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 16.587 16.807 2 0.048381 16468 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 82.716 19.429 20316000 0 0 0 1039500 0 2056200 1740900 0 1176200 1707900 4023800 2521800 2159600 1428400 2462100 42132 3065 37698 351256;351257;351258;351259;351260;351261;351262;351263;351264;351265 278257 278257 0 QLQSDFYGR Unmodified 1112.5251 0.52507234 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 41.494 41.861 2 0.012702 45824 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 60.91 50.773 7842800 0 0 0 0 0 0 0 0 0 0 4932200 0 0 2910600 0 42133 2495 37699 351266;351267 278258 278258 1 QLQSEQPQTAAAR Unmodified 1426.7165 0.71645494 4917 Q9UI12 ATP6V1H V-type proton ATPase subunit H yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.961 21.168 2 3.9736E-33 21544 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 169.65 151.84 90626000 0 0 0 4186000 4173300 11346000 6471300 5225200 4220700 12720000 8909700 10419000 6423500 5851400 10679000 42134 4917 37700 351268;351269;351270;351271;351272;351273;351274;351275;351276;351277;351278;351279 278259;278260;278261;278262;278263;278264;278265;278266;278267;278268;278269;278270;278271;278272 278269 14 QLQSEQPQTAAARS Unmodified 1513.7485 0.74848335 4917 Q9UI12 ATP6V1H V-type proton ATPase subunit H yes yes 0 0 1 By MS/MS 2 0 1 1 24.205 20.077 2 0.003888 26505 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.34 64.96 10540000 0 10540000 0 0 0 0 0 0 0 0 0 0 0 0 0 42135 4917 37701 351280 278273 278273 1 QLQYPNPLPVLSGAELEK Unmodified 1995.0677 0.06769222 3891 Q96JC1 VPS39 Vam6/Vps39-like protein yes yes 0 0 0 By MS/MS 10 0 1 1 89.808 90.013 2 0.0095726 104536 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 31.639 22.91 1366600 0 0 0 0 0 0 0 0 0 0 1366600 0 0 0 0 42136 3891 37702 351281 278274 278274 1 QLRAAQLQHSEK Unmodified 1407.7583 0.75826017 2598 Q16204 CCDC6 Coiled-coil domain-containing protein 6 yes yes 0 0 1 By MS/MS 2 0 1 1 22.566 17.67 3 0.013918 25195 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.786 39.861 57737000 57737000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42137 2598 37703 351282 278275 278275 1 QLREESAHLR Unmodified 1237.6527 0.65273247 5278 Q9Y6D9 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.64 14.804 3 0.0018347 14036 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 80.706 57.789 288370000 0 0 0 19553000 6398800 17193000 15307000 21929000 10397000 33660000 35256000 35410000 27130000 22667000 43472000 42138 5278 37704 351283;351284;351285;351286;351287;351288;351289;351290;351291;351292;351293;351294 278276;278277;278278;278279;278280;278281;278282;278283;278284 278277 9 QLRETQSTPQSAPQVR Unmodified 1824.9442 0.94422304 4938 Q9UJF2 RASAL2 Ras GTPase-activating protein nGAP yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 44.135 44.091 3 0.025022 30768 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 29.077 10.939 10754000 0 0 0 0 3395900 0 3353600 0 0 0 0 4004200 0 0 0 42139 4938 37705 351295;351296;351297 278285;278286 278285 2 QLREYQELMNVK Unmodified 1549.7923 0.79226242 67;51 CON__H-INV:HIT000292931;CON__P05787;P05787 KRT8 Keratin, type II cytoskeletal 8 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.67 1.6 1 23 1 2 2 2 2 2 1 2 2 2 2 2 2 62.422 62.156 2;3 1.2422E-20 70542 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 150.06 134.89 + 637600000 61232000 0 0 13186000 24424000 41146000 29523000 59398000 26159000 9899500 52116000 67074000 43775000 40824000 168840000 42140 51;67 37706 351298;351299;351300;351301;351302;351303;351304;351305;351306;351307;351308;351309;351310;351311;351312;351313;351314;351315;351316;351317;351318;351319;351320;351321 278287;278288;278289;278290;278291;278292;278293;278294;278295;278296;278297;278298;278299 278298 13 QLREYQELMNVK Oxidation (M) 1565.7872 0.78717704 67;51 CON__H-INV:HIT000292931;CON__P05787;P05787 KRT8 Keratin, type II cytoskeletal 8 no no 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 2 1 1 2 2 1 1 1 1 1 2 1 46.447 46.565 3 9.0505E-06 53182 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 94.767 63.552 + 543770000 0 0 0 41844000 43212000 32116000 84518000 70728000 28962000 56364000 37278000 45033000 28905000 45692000 29114000 42141 51;67 37706 351322;351323;351324;351325;351326;351327;351328;351329;351330;351331;351332;351333;351334;351335;351336;351337 278300;278301;278302;278303;278304;278305;278306;278307;278308;278309;278310;278311 278310 46 3 QLREYQELMSVK Unmodified 1522.7814 0.78136338 69;88 CON__P08729;CON__Q3KNV1;P08729 KRT7 Keratin, type II cytoskeletal 7 no no 0 0 1 By matching By MS/MS By MS/MS 10 0 3 1 1 1 62.584 62.757 3 0.0037136 70945 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.023 41.043 + 14914000 0 0 0 0 2272800 0 0 0 0 0 0 5686400 0 0 6954800 42142 69;88 37707 351338;351339;351340 278312 278312 1 QLRFEDVVNQSSPK Unmodified 1645.8424 0.84238373 2048 Q01085 TIAL1 Nucleolysin TIAR yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60.97 60.202 3 4.4736E-44 81702 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 167.73 149.13 278010000 100240000 0 14896000 4912000 5423800 16861000 10135000 8919700 7852700 21010000 16396000 12854000 15477000 12434000 30592000 42143 2048 37708 351341;351342;351343;351344;351345;351346;351347;351348;351349;351350;351351;351352;351353;351354 278313;278314;278315;278316;278317;278318;278319;278320;278321;278322;278323;278324;278325;278326 278317 14 QLRFESTMK Unmodified 1138.5805 0.58047873 1310 P31944 CASP14 Caspase-14;Caspase-14 subunit p17, mature form;Caspase-14 subunit p10, mature form;Caspase-14 subunit p20, intermediate form;Caspase-14 subunit p8, intermediate form yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 1 2 2 1 1 1 2 2 1 2 36.768 37.059 2;3 0.03431 40010 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 32.633 22.346 169070000 0 0 0 14949000 0 10097000 12181000 20521000 6074100 15819000 18193000 35444000 13181000 9720700 12889000 42144 1310 37709 351355;351356;351357;351358;351359;351360;351361;351362;351363;351364;351365;351366;351367;351368;351369;351370 278327;278328 278327 1 QLSAMNSDELISFPLK Oxidation (M) 1807.9026 0.90260073 5299 Q9Y6X9 MORC2 MORC family CW-type zinc finger protein 2 yes yes 0 1 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 85.319 85.424 2 0.0011266 99054 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 65.395 38.066 6805100 0 0 0 0 0 0 0 0 0 4356100 0 0 0 2448900 0 42145 5299 37710 351371;351372;351373 278329;278330 278329 6699 1 QLSAQSYGVTSSTAR Unmodified 1554.7638 0.76379906 1600 P49790 NUP153 Nuclear pore complex protein Nup153 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 40.848 41.037 2 2.412E-35 44681 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 155.48 140.6 188530000 0 0 0 15182000 11560000 18641000 0 13646000 11180000 3968800 20162000 24544000 18547000 14919000 36184000 42146 1600 37711 351374;351375;351376;351377;351378;351379;351380;351381;351382;351383;351384 278331;278332;278333;278334;278335;278336 278335 6 QLSAQSYGVTSSTARR Unmodified 1710.8649 0.86491009 1600 P49790 NUP153 Nuclear pore complex protein Nup153 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 34.847 35.057 3 2.3072E-06 37463 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.729 46.721 77114000 0 0 0 5066800 3437500 0 7838100 6093500 0 0 9565900 11637000 11832000 8985100 12658000 42147 1600 37712 351385;351386;351387;351388;351389;351390;351391;351392;351393 278337;278338;278339;278340;278341;278342;278343;278344;278345 278338 9 QLSDAISIIGR Unmodified 1171.6561 0.65608651 1754 P55060 CSE1L Exportin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.593 76.677 2 1.9177E-05 87930 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 124.81 58.301 114970000 0 0 0 4250900 0 15926000 8510700 0 2680800 14975000 11442000 11460000 7787500 11693000 26241000 42148 1754 37713 351394;351395;351396;351397;351398;351399;351400;351401;351402;351403;351404;351405 278346;278347;278348;278349;278350;278351;278352;278353;278354;278355;278356;278357 278350 12 QLSDAISIIGREDFPQK Unmodified 1916.0003 0.0003409361 1754 P55060 CSE1L Exportin-2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 81.334 81.442 3 0.0053659 94212 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 26.89 17.606 29477000 0 0 0 0 0 8309500 0 0 0 8600800 0 0 0 0 12566000 42149 1754 37714 351406;351407;351408 278358;278359;278360 278359 3 QLSEPCLYPEPLPALRPTPR Unmodified 2333.2202 0.22018689 2781 Q5T749 KPRP Keratinocyte proline-rich protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.678 82.74 3 2.7879E-07 95722 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 67.995 59.807 77129000 0 0 0 8663900 2112300 10101000 3399000 5576900 4080900 8980200 4772400 5903600 8535100 5441700 9562300 42150 2781 37715 351409;351410;351411;351412;351413;351414;351415;351416;351417;351418;351419;351420 278361;278362;278363;278364;278365;278366;278367;278368;278369;278370;278371 278361 11 QLSESFK Unmodified 837.42323 0.42323303 2163 Q08945 SSRP1 FACT complex subunit SSRP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 26.387 26.713 2 0.04888 28049 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.757 21.843 95896000 0 0 0 14383000 0 0 0 18291000 0 0 0 23421000 0 16020000 23782000 42151 2163 37716 351421;351422;351423;351424;351425 278372 278372 1 QLSESQVK Unmodified 917.48181 0.48181054 1954 P67775 PPP2CA Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.27 2.3 2 20 1 1 1 2 1 2 1 2 2 2 2 1 2 2 13.679 13.504 2 0.006821 11896 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.352 47.609 719730000 39775000 463970000 0 5606600 16641000 12292000 15391000 5276500 14670000 20537000 28696000 29029000 6704200 17020000 44125000 42152 1954 37717 351426;351427;351428;351429;351430;351431;351432;351433;351434;351435;351436;351437;351438;351439;351440;351441;351442;351443;351444;351445;351446;351447 278373;278374;278375;278376;278377;278378;278379;278380 278375 8 QLSEVFIQLPSRK Unmodified 1543.8722 0.8722273 1656;1655 P51532;P51531 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 76.604 76.612 3 0.00032536 88366 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 55.98 50.92 86328000 0 0 0 4589000 3510200 19833000 7111700 9582900 11310000 12979000 8831000 0 8581100 0 0 42153 1656;1655 37718 351448;351449;351450;351451;351452;351453;351454;351455;351456 278381;278382;278383;278384;278385;278386;278387;278388;278389 278381 9 QLSFISPPTPQPK Unmodified 1438.782 0.78201531 323 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 75.782 74.727 2 8.1892E-30 95214 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 163.84 137.4 572680000 31753000 73589000 0 32637000 36767000 52526000 47037000 40366000 40700000 80518000 0 56352000 38999000 41436000 0 42154 323 37719 351457;351458;351459;351460;351461;351462;351463;351464;351465;351466;351467;351468 278390;278391;278392;278393;278394;278395;278396;278397;278398;278399;278400;278401;278402 278395 13 QLSGDQPTIRK Unmodified 1241.6728 0.67279921 3764 Q96BS2 TESC Calcineurin B homologous protein 3 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 26.191 21.478 3 0.020315 30375 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.958 26.932 89293000 64013000 25280000 0 0 0 0 0 0 0 0 0 0 0 0 0 42155 3764 37720 351469;351470 278403 278403 1 QLSILVHPDK Unmodified 1148.6554 0.65535823 562 O75937 DNAJC8 DnaJ homolog subfamily C member 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 52.603 52.85 3 0.0046379 58503 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.471 31.174 109590000 0 0 0 4325100 0 0 0 5335500 5813200 0 20965000 25457000 5918600 0 41774000 42156 562 37721 351471;351472;351473;351474;351475;351476;351477 278404;278405;278406;278407 278404 4 QLSLEGSGLGVEDLK Unmodified 1543.8094 0.80935227 5023 Q9UMZ2 SYNRG Synergin gamma yes yes 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching 10 0 7 1 1 1 1 1 1 1 78.919 79.075 2 0.02143 91553 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 42.809 20.28 24374000 0 0 0 0 0 0 2352500 1600800 0 4621000 3626200 0 2722000 2866100 6585100 42157 5023 37722 351478;351479;351480;351481;351482;351483;351484 278408 278408 1 QLSLPLTQSK Unmodified 1113.6394 0.63937381 4292 Q9C0I1 MTMR12 Myotubularin-related protein 12 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 65.117 64.979 2 0.0081131 74939 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 60.828 26.642 6769700 0 0 0 0 2014800 2816200 1938700 0 0 0 0 0 0 0 0 42158 4292 37723 351485;351486;351487 278409;278410 278410 2 QLSLPQQEAQK Unmodified 1268.6725 0.67246486 689 O95782 AP2A1 AP-2 complex subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41.865 41.36 2 1.3267E-05 50966 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.71 79.961 1000800000 0 815200000 4535300 10560000 6115800 12765000 9931100 7877200 10247000 12904000 11985000 15141000 11901000 56167000 15494000 42159 689 37724 351488;351489;351490;351491;351492;351493;351494;351495;351496;351497;351498;351499;351500;351501 278411;278412;278413;278414;278415;278416;278417;278418;278419;278420;278421;278422;278423;278424;278425 278414 15 QLSNPQQEVQNIFK Unmodified 1671.858 0.8580338 613 O94973 AP2A2 AP-2 complex subunit alpha-2 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 80.162 79.71 2 3.6303E-45 98980 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 219.03 165.28 96819000 0 62218000 0 0 2463100 3659900 2627400 0 2840500 5445900 0 6717300 0 2504400 8341800 42160 613 37725 351502;351503;351504;351505;351506;351507;351508;351509;351510 278426;278427;278428;278429;278430;278431;278432 278429 7 QLSPEDSSSPVK Unmodified 1272.6198 0.61976058 3743 Q96AY2 EME1 Crossover junction endonuclease EME1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 30.997 31.186 2 0.011138 34068 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 61.65 46.269 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42161 3743 37726 351511;351512 278433;278434 278433 2 QLSQAGSFSDGTHGGLR Unmodified 1716.818 0.81795989 1802 P58107 EPPK1 Epiplakin yes yes 0 0 0 By MS/MS 10 0 1 1 41.74 41.223 3 0.014897 46583 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 33.666 26.223 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42162 1802 37727 351513 278435 278435 1 QLSQALDTSNVMVK Unmodified 1532.7868 0.78684269 2646 Q27J81 INF2 Inverted formin-2 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 64.065 64.209 2 0.001088 73553 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 61.213 38.068 11382000 0 0 0 0 0 0 3419100 0 0 5557300 0 0 2405500 0 0 42163 2646 37728 351514;351515;351516;351517;351518 278436;278437;278438 278436 3 QLSQALDTSNVMVK Oxidation (M) 1548.7818 0.78175731 2646 Q27J81 INF2 Inverted formin-2 yes yes 0 1 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 54.231 54.38 2 0.0022035 61978 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 48.44 28.136 6750100 0 0 0 0 0 0 1933800 2162800 0 0 0 0 0 2653500 0 42164 2646 37728 351519;351520;351521 278439 278439 4308 1 QLSQATAAATNHTTDNGVGPEEESVDPNQYYK Unmodified 3434.5498 0.5498497 2485 Q15046 KARS Lysine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.91 3.42 2 1 8 1 2 1 1 1 1 1 1 1 1 63.42 61.888 3 1.4589E-25 71186 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 61.499 56.179 244960000 5659500 173140000 0 0 0 5195400 0 4559200 0 5426300 9912600 12944000 4011300 6413500 17700000 42165 2485 37729 351522;351523;351524;351525;351526;351527;351528;351529;351530;351531;351532 278440;278441;278442;278443;278444;278445;278446;278447;278448;278449;278450;278451;278452;278453 278453 14 QLSQQSDGDRDLQEHR Unmodified 1910.8831 0.88307935 3284 Q8IYI6 EXOC8 Exocyst complex component 8 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 1 2 1 2 2 2 2 2 2 17.287 17.578 3;4 0.0041323 16806 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 40.801 33.21 77557000 0 0 0 3581900 0 0 5864100 4759400 1592500 8944700 8497800 20254000 7947600 7822200 8292700 42166 3284 37730 351533;351534;351535;351536;351537;351538;351539;351540;351541;351542;351543;351544;351545;351546;351547;351548;351549 278454;278455;278456;278457;278458 278455 5 QLSSCLPNIVPK Unmodified 1354.7279 0.72787125 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 77.248 75.073 2 0.0031927 93987 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.568 83.939 104360000 9923500 81147000 0 2498500 0 4936300 2849200 0 3005600 0 0 0 0 0 0 42167 3641 37731 351550;351551;351552;351553;351554;351555 278459;278460;278461 278460 3 QLSSDAEAQK Unmodified 1075.5146 0.51456723 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 2 2 1 1 1 1 1 1 8.6945 8.7885 2 0.0029838 6898 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.149 44.886 35368000 0 0 0 1859500 1069000 2336200 5349200 1449800 1088600 0 8406900 3928200 4120500 0 5760400 42168 2203 37732 351556;351557;351558;351559;351560;351561;351562;351563;351564;351565;351566;351567 278462;278463;278464;278465 278462 4 QLSSEELEQFQK Unmodified 1464.7096 0.70963822 1441 P41252 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 62.104 60.763 2 8.1657E-16 76593 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 188.49 143.46 1300700000 17166000 880330000 3381100 18708000 21981000 35875000 27523000 27059000 18361000 38808000 47511000 50262000 23398000 30905000 59428000 42169 1441 37733 351568;351569;351570;351571;351572;351573;351574;351575;351576;351577;351578;351579;351580;351581;351582;351583 278466;278467;278468;278469;278470;278471;278472;278473;278474;278475;278476;278477;278478;278479;278480;278481;278482;278483 278469 18 QLSSGVSEIR Unmodified 1074.5669 0.56693715 786 P04792 HSPB1 Heat shock protein beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.871 36.056 2 0.00057957 40163 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 123.35 88.531 9335600000 0 0 0 706990000 442170000 625880000 779030000 635910000 0 956880000 1033500000 1061700000 640910000 714260000 1738400000 42170 786 37734 351584;351585;351586;351587;351588;351589;351590;351591;351592;351593;351594;351595 278484;278485;278486;278487;278488;278489;278490;278491;278492;278493;278494;278495;278496;278497;278498 278498 14 QLSSGVSEIRHTADR Unmodified 1654.8387 0.83869534 786 P04792 HSPB1 Heat shock protein beta-1 yes yes 0 0 1 By matching By matching By MS/MS 10 0 3 1 1 1 32.96 33.319 3 0.021011 35271 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 28.546 15.919 18761000 0 0 0 0 0 0 4897600 0 0 0 0 0 0 3435900 10427000 42171 786 37735 351596;351597;351598 278499 278499 1 QLSSSVTGLTNIEEENCQR Unmodified 2164.0066 0.0066248805 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 25 2 2 2 2 2 2 2 2 2 3 2 2 69.112 69.19 2;3 1.8235E-263 79534 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 259.1 237.54 1210200000 0 0 0 97422000 94554000 141780000 99799000 71950000 67202000 118670000 117720000 125420000 73650000 74580000 127440000 42172 1518 37736 351599;351600;351601;351602;351603;351604;351605;351606;351607;351608;351609;351610;351611;351612;351613;351614;351615;351616;351617;351618;351619;351620;351621;351622;351623 278500;278501;278502;278503;278504;278505;278506;278507;278508;278509;278510;278511;278512;278513;278514;278515;278516;278517;278518;278519;278520;278521 278518 18 QLSSSVTGLTNIEEENCQRYLDELMK Unmodified 3056.4431 0.44306513 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 93.922 90.268 3 5.7448E-05 113289 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 48.337 38.62 29229000 0 25200000 4029600 0 0 0 0 0 0 0 0 0 0 0 0 42173 1518 37737 351624;351625 278522;278523 278522 2 QLSSTSPLAPYPTSQMVSSDR Unmodified 2251.0791 0.079061542 2975 Q6UUV7 CRTC3 CREB-regulated transcription coactivator 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 74.304 74.42 2 3.7513E-53 85349 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 153.23 111.14 72493000 0 0 0 0 5356600 3267300 4267700 5381300 3606600 7859800 7241500 7710200 5749400 6678500 15374000 42174 2975 37738 351626;351627;351628;351629;351630;351631;351632;351633;351634;351635;351636 278524;278525;278526;278527;278528;278529;278530;278531 278525 8 QLSTSSDSPAPASSSSQVTASTSQQPVRR Unmodified 2946.4279 0.42788407 3080 Q7Z3B3 KANSL1 KAT8 regulatory NSL complex subunit 1 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 40.611 40.679 3 6.3731E-09 45424 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 55.358 48.854 42293000 0 0 0 3973000 3478900 4738900 4053500 4944000 3424600 6178500 0 6120000 0 5381500 0 42175 3080 37739 351637;351638;351639;351640;351641;351642;351643;351644;351645 278532;278533;278534;278535;278536;278537;278538 278536 7 QLSVIPPMMFDAEQR Unmodified 1760.859 0.85896177 488 O75376 NCOR1 Nuclear receptor corepressor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.14 76.197 2 0.050235 87515 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 28.204 7.4271 82760000 0 0 0 2738000 3730800 7285300 5895300 6102500 5020500 8750800 7209200 11299000 7707700 6634100 10386000 42176 488 37740 351646;351647;351648;351649;351650;351651;351652;351653;351654;351655;351656;351657 278539 278539 1 QLSVPIPGGSNGDIQQVGVIR Unmodified 2133.1542 0.15421582 5052 Q9UPN9 TRIM33 E3 ubiquitin-protein ligase TRIM33 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 83.846 83.982 3 2.621E-37 97265 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 105.79 100.21 69853000 0 0 0 0 0 9330800 0 6987300 5310900 11051000 6853500 11777000 4348800 5918500 8275800 42177 5052 37741 351658;351659;351660;351661;351662;351663;351664;351665;351666;351667 278540;278541;278542;278543;278544;278545;278546;278547;278548;278549;278550 278541 11 QLSVVVPSYNEEK Unmodified 1490.7617 0.76167379 5265 Q9Y673 ALG5 Dolichyl-phosphate beta-glucosyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 66.175 66.235 2 0.0018558 75941 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 61.353 43.042 16929000 0 0 0 0 2864200 0 3729600 3183600 0 0 0 7151200 0 0 0 42178 5265 37742 351668;351669;351670;351671 278551;278552;278553;278554 278552 4 QLTEEDGVHSVIEENIK Unmodified 1938.9535 0.95345032 2231 Q13085 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.42 3.66 3 1 8 1 2 1 1 1 1 1 1 1 1 1 67.308 65.591 3 2.1194E-13 79991 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 87.287 71.403 136900000 3407600 79501000 2359700 0 0 8100800 3831600 0 3346200 8484300 7834100 0 7912600 4907300 7211200 42179 2231 37743 351672;351673;351674;351675;351676;351677;351678;351679;351680;351681;351682;351683 278555;278556;278557;278558;278559;278560;278561;278562;278563 278559 8 QLTEGTRLQK Unmodified 1172.6513 0.65133548 162 O00499 BIN1 Myc box-dependent-interacting protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 6 2 2 2 23.409 19.419 2;3 1.1773E-47 27292 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 217.64 90.62 619080000 582310000 20916000 15850000 0 0 0 0 0 0 0 0 0 0 0 0 42180 162 37744 351684;351685;351686;351687;351688;351689 278564;278565;278566;278567 278565 2 QLTFEEIAK Unmodified 1077.5706 0.57062555 5036 Q9UNM6 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 66.129 66.082 2 0.0050741 76228 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 125.98 98.494 245390000 0 0 0 22544000 30545000 39572000 13729000 0 0 52848000 0 73641000 0 12515000 0 42181 5036 37745 351690;351691;351692;351693;351694;351695;351696 278568;278569;278570;278571;278572;278573;278574 278574 2 QLTGNMLVHGSSLSTGK Oxidation (M) 1744.8778 0.87778296 5329 yes yes 0 1 0 By MS/MS 10 0 1 1 58.144 58.746 2 0.0012923 65986 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.188 13.467 + 8459000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8459000 42182 5329 37746 351697 278575 278575 6725 1 QLTLEQLRR Unmodified 1155.6724 0.67240528 2598 Q16204 CCDC6 Coiled-coil domain-containing protein 6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.76 49.916 3 0.00168 56469 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 79.906 57.186 234410000 0 0 0 7942300 10497000 19539000 13047000 11102000 12102000 22596000 20784000 31581000 18213000 24391000 42617000 42183 2598 37747 351698;351699;351700;351701;351702;351703;351704;351705;351706;351707;351708;351709 278576;278577;278578;278579;278580;278581;278582;278583;278584;278585;278586;278587;278588 278584 13 QLTLGAYK Unmodified 892.50182 0.5018177 673 O95619 YEATS4 YEATS domain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.97 47.137 2 0.020846 52008 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 62.464 26.971 141100000 0 0 0 9200200 9118500 13415000 10208000 11551000 8058300 15411000 13153000 12878000 15007000 8061800 15042000 42184 673 37748 351710;351711;351712;351713;351714;351715;351716;351717;351718;351719;351720;351721 278589;278590;278591 278591 3 QLTLTQEALQSR Unmodified 1386.7467 0.74669243 2155 Q08378 GOLGA3 Golgin subfamily A member 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.381 61.481 2 1.6039E-09 70177 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 143.96 81.998 69660000 0 0 0 4284000 2988800 7009800 5733600 3863900 4148400 6159300 7626000 8103300 5003000 4439900 10300000 42185 2155 37749 351722;351723;351724;351725;351726;351727;351728;351729;351730;351731;351732;351733 278592;278593;278594;278595;278596;278597;278598;278599;278600;278601;278602;278603;278604;278605;278606 278594 15 QLTPPEGSSK Unmodified 1042.5295 0.52948901 4033 Q99613;B5ME19 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 20.237 20.521 2 0.00086291 21421 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 118.5 108.91 175000000 0 0 0 13104000 0 0 18445000 10655000 0 17953000 21967000 25928000 22838000 17339000 26774000 42186 4033 37750 351734;351735;351736;351737;351738;351739;351740;351741;351742 278607;278608;278609;278610;278611;278612;278613;278614;278615 278615 9 QLTQLINK Unmodified 956.56548 0.56548059 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 44.43 44.602 2 0.0044499 50094 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 110.63 70.97 195660000 0 0 0 13151000 10576000 21395000 13810000 13841000 15020000 17072000 16567000 17864000 25563000 10248000 20551000 42187 2556 37751 351743;351744;351745;351746;351747;351748;351749;351750;351751;351752;351753;351754 278616;278617;278618;278619;278620;278621;278622;278623;278624;278625;278626;278627;278628 278621 12 QLTQPETHFGREPAAAISRPR Unmodified 2361.2302 0.23017473 4940 Q9UJU6 DBNL Drebrin-like protein yes yes 0 0 2 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 48.132 48.454 5 0.00054681 53340 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.805 33.001 47741000 0 0 0 0 0 0 0 5800000 0 5259300 0 0 0 8102800 28579000 42188 4940 37752 351755;351756;351757;351758 278629 278629 1 QLTSNTVQQHPSTPK Unmodified 1664.8482 0.84819739 604 O94916 NFAT5 Nuclear factor of activated T-cells 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 4 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25.099 24.087 2;3 0.0018877 24638 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 30.332 17.949 149460000 44972000 39746000 1685800 2336500 2872400 4619000 3816300 3167200 2969100 6358900 4890600 6792600 4534700 4455800 16242000 42189 604 37753 351759;351760;351761;351762;351763;351764;351765;351766;351767;351768;351769;351770;351771;351772;351773;351774 278630;278631;278632;278633;278634;278635;278636;278637;278638 278637 8 QLTVLSDQQK Unmodified 1158.6245 0.62445203 344 O43592 XPOT Exportin-T yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.64 2.9 1 1 9 2 1 1 1 1 1 1 1 1 1 38.587 37.855 2;3 0.0005948 44840 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 131.22 101.04 510890000 0 430440000 0 0 4845400 12612000 4848200 4776300 0 9275100 11359000 6382400 0 7183300 19170000 42190 344 37754 351775;351776;351777;351778;351779;351780;351781;351782;351783;351784;351785 278639;278640;278641;278642;278643;278644;278645;278646;278647;278648;278649 278639 11 QLTVQMMQNPQILAALQER 2 Oxidation (M) 2243.1402 0.14022201 1761 P55209 NAP1L1 Nucleosome assembly protein 1-like 1 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 81.475 81.625 3 1.1251E-08 94185 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.676 71.488 39443000 0 0 0 0 0 4205300 0 4166300 2216100 0 0 10404000 0 0 18451000 42191 1761 37755 351786;351787;351788;351789;351790 278650;278651 278650 2878;2879 2 QLTVTQQSQEEVAR Unmodified 1615.8166 0.81656291 461 O75146 HIP1R Huntingtin-interacting protein 1-related protein yes yes 0 0 0 By matching By matching By MS/MS By matching By matching 10 0 5 1 1 1 1 1 38.264 38.452 2 0.0004332 42629 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 88.681 67.217 13707000 0 0 0 3183000 0 0 1512600 0 0 2986000 2793000 3232800 0 0 0 42192 461 37756 351791;351792;351793;351794;351795 278652 278652 1 QLVAEAIHSGK Unmodified 1151.6299 0.62987176 4215 Q9BWU0 SLC4A1AP Kanadaptin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.33 2.98 5 1 2 1 2 1 37.195 33.14 2;3 0.0028245 42163 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 115.78 69.356 276460000 202160000 8293000 51017000 0 0 0 0 0 0 0 0 0 0 0 14996000 42193 4215 37757 351796;351797;351798;351799;351800;351801 278653;278654;278655;278656 278656 2 QLVAEQVTYQR Unmodified 1333.699 0.69901396 1590 P49736 MCM2 DNA replication licensing factor MCM2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 47.3 47.012 2 1.9374E-05 51787 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 152.11 112.11 213430000 0 13702000 0 6851300 6971900 20113000 10533000 8728200 6512700 16359000 25308000 22571000 14715000 16763000 44306000 42194 1590 37758 351802;351803;351804;351805;351806;351807;351808;351809;351810;351811;351812;351813;351814 278657;278658;278659;278660;278661;278662;278663;278664;278665;278666;278667;278668;278669 278661 13 QLVARPDVVEMHDVTAQDPK Oxidation (M) 2263.1267 0.12668044 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 14 2 1 2 2 1 1 2 1 1 1 49.183 49.37 3;4 9.0994E-21 56906 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 92.474 83.22 758350000 0 0 0 88073000 0 33224000 167410000 125300000 0 29182000 33152000 165450000 23508000 36938000 56118000 42195 2290 37759 351815;351816;351817;351818;351819;351820;351821;351822;351823;351824;351825;351826;351827;351828 278670;278671;278672;278673;278674 278674 3743 5 QLVARPDVVEMHDVTAQDPK Unmodified 2247.1318 0.13176581 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.68 1.57 1 24 1 2 2 2 2 2 2 2 2 2 2 2 2 61.207 61.155 3;4 1.5463E-135 69568 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 204.29 180.25 801220000 0 0 3802400 20267000 15015000 57550000 29349000 80268000 37335000 63187000 64299000 111290000 58326000 81545000 178990000 42196 2290 37759 351829;351830;351831;351832;351833;351834;351835;351836;351837;351838;351839;351840;351841;351842;351843;351844;351845;351846;351847;351848;351849;351850;351851;351852;351853 278675;278676;278677;278678;278679;278680;278681;278682;278683;278684;278685;278686;278687;278688;278689;278690;278691;278692;278693;278694;278695;278696 278693 9 QLVDTTVELANK Unmodified 1329.714 0.71399532 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 60.153 60.179 2 2.7967E-06 68604 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 130.94 99.006 204670000 0 0 0 13634000 17617000 16305000 24954000 17646000 0 24329000 0 0 28971000 26311000 34903000 42197 516 37760 351854;351855;351856;351857;351858;351859;351860;351861;351862 278697;278698;278699;278700;278701;278702;278703;278704;278705 278703 9 QLVEADINGLR Unmodified 1226.6619 0.66190017 52;94 CON__Q497I4;CON__O76013;O76013 KRT36 Keratin, type I cuticular Ha6 no no 0 0 0 By MS/MS 10 0 1 1 67.057 67.24 2 0.026784 77154 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 55.461 28.207 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42198 94;52 37761 351863 278706 278706 1 QLVEADINGLRR Unmodified 1382.763 0.7630112 52;94 CON__Q497I4;CON__O76013;O76013 KRT36 Keratin, type I cuticular Ha6 no no 0 0 1 By MS/MS 10 0 1 1 57.907 58.078 3 0.013168 66080 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 34.685 26.96 + 11469000 0 0 0 0 0 0 0 11469000 0 0 0 0 0 0 0 42199 94;52 37762 351864 278707 278707 1 QLVEQVEQIQK Unmodified 1340.73 0.72997974 4191 Q9BVK6 TMED9 Transmembrane emp24 domain-containing protein 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 53.392 53.525 2 9.499E-38 60424 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 214.83 45.747 247280000 0 0 0 14754000 23464000 20765000 19145000 20848000 16525000 27982000 31340000 31081000 14073000 0 27300000 42200 4191 37763 351865;351866;351867;351868;351869;351870;351871;351872;351873;351874;351875 278708;278709;278710;278711;278712;278713;278714;278715;278716;278717;278718;278719;278720;278721;278722;278723;278724;278725 278714 17 QLVESDINSLR Unmodified 1272.6674 0.66737948 86 CON__Q14525;Q14525 KRT33B Keratin, type I cuticular Ha3-II yes no 0 0 0 By matching By MS/MS By matching 10 0 3 1 1 1 58.581 58.732 2 0.00026237 66878 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 105.2 66.902 + 8547500 0 0 0 0 0 0 1252700 6145800 1149000 0 0 0 0 0 0 42201 86 37764 351876;351877;351878 278726 278726 1 QLVESDINSLRR Unmodified 1428.7685 0.76849051 86 CON__Q14525;Q14525 KRT33B Keratin, type I cuticular Ha3-II yes no 0 0 1 By MS/MS 10 0 1 1 50.621 50.785 3 2.0401E-08 57453 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 106.67 90.575 + 47857000 0 0 0 0 0 0 0 47857000 0 0 0 0 0 0 0 42202 86 37765 351879 278727;278728 278728 2 QLVESDLNGLR Unmodified 1242.6568 0.65681479 111 CON__REFSEQ:XP_986630 yes yes 0 0 0 By MS/MS 10 0 1 1 57.529 57.7 2 0.036536 65870 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 55.567 0 + 22701000 0 0 0 0 0 0 0 22701000 0 0 0 0 0 0 0 42203 111 37766 351880 278729 278729 0 QLVESDLNGLRR Unmodified 1398.7579 0.75792582 111 CON__REFSEQ:XP_986630 yes yes 0 0 1 By MS/MS 10 0 1 1 49.084 49.25 3 0.004356 55469 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 43.991 0 + 127440000 0 0 0 0 0 0 0 127440000 0 0 0 0 0 0 0 42204 111 37767 351881 278730 278730 1 QLVHELDEAEYR Unmodified 1500.7209 0.72087161 2127 Q06323 PSME1 Proteasome activator complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 48.895 49.216 3 0.0001646 54848 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 73.624 65.111 134390000 0 0 0 0 0 17483000 7140100 8052500 0 7150300 22067000 14310000 14231000 13232000 30729000 42205 2127 37768 351882;351883;351884;351885;351886;351887;351888;351889;351890 278731;278732;278733;278734;278735;278736;278737;278738;278739;278740 278738 8 QLVLDPLAVEK Unmodified 1223.7125 0.71253876 4597 Q9NRE2 TSHZ2 Teashirt homolog 2 yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching 10 0 8 1 1 1 1 1 1 1 1 81.731 81.805 2 0.021312 94444 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 42.348 26.686 14304000 0 0 0 0 1768700 1690500 2209600 1760500 1920800 2505000 0 0 1118200 1331200 0 42206 4597 37769 351891;351892;351893;351894;351895;351896;351897;351898 278741 278741 1 QLVLQPVK Unmodified 923.5804 0.58040237 4517 Q9HCK8 CHD8 Chromodomain-helicase-DNA-binding protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 51.677 51.502 2 0.018686 58106 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 64.236 28.987 42003000 0 0 0 8374500 7148200 10312000 7966700 8202400 0 0 0 0 0 0 0 42207 4517 37770 351899;351900;351901;351902;351903;351904;351905 278742;278743;278744;278745 278742 4 QLVNMCINPDPEK Unmodified 1556.7327 0.73269863 3508 Q8TDX7 NEK7 Serine/threonine-protein kinase Nek7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 69.112 69.214 2 3.5347E-09 79475 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 113.63 104.63 28605000 0 0 0 0 2084300 4705600 2532800 1990600 0 3591000 4496000 3961800 2529900 2712600 0 42208 3508 37771 351906;351907;351908;351909;351910;351911;351912;351913;351914;351915 278746;278747;278748;278749;278750;278751 278749 6 QLVRDNADLRCELPK Unmodified 1825.9469 0.94686558 1328 P33176;O60282;Q12840 KIF5B;KIF5C;KIF5A Kinesin-1 heavy chain;Kinesin heavy chain isoform 5C;Kinesin heavy chain isoform 5A yes no 0 0 2 By MS/MS 2 0 1 1 61.205 52.963 3 0.038137 71750 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 39.005 26.512 8484300 8484300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42209 1328 37772 351916 278752 278752 1 QLVREEQEK Unmodified 1157.6041 0.60405094 4393 Q9H4A3 WNK1 Serine/threonine-protein kinase WNK1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.2 2.4 2 18 1 1 2 1 2 2 2 1 2 1 2 1 2 10.627 10.373 2;3 0.0024762 6588 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 98.044 30.147 329980000 0 28473000 15006000 28629000 19621000 22521000 30555000 23070000 15090000 22647000 50969000 0 43537000 17887000 11970000 42210 4393 37773 351917;351918;351919;351920;351921;351922;351923;351924;351925;351926;351927;351928;351929;351930;351931;351932;351933;351934;351935;351936 278753;278754;278755;278756;278757;278758;278759;278760;278761;278762 278759 6 QLVSDGLLDSVPGVK Unmodified 1525.8352 0.83517309 2777 Q5T5X7 BEND3 BEN domain-containing protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 83.673 83.136 2 0.00066778 102939 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.403 69.1 57754000 0 28284000 0 0 2906100 3367900 3217500 3422500 2868900 7867900 0 0 0 5819200 0 42211 2777 37774 351937;351938;351939;351940;351941;351942;351943;351944 278763;278764;278765;278766 278764 4 QLVSEEDNTSAPSLFK Unmodified 1763.8578 0.85775902 3532 Q8WTW3 COG1 Conserved oligomeric Golgi complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 71.341 71.404 2 0.00086224 81538 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.164 33.791 39924000 0 0 0 2340100 1773300 5250400 1855300 0 2521200 4811500 4761900 5083600 2613900 2139700 6772700 42212 3532 37775 351945;351946;351947;351948;351949;351950;351951;351952;351953;351954;351955 278767;278768;278769;278770;278771;278772 278769 6 QLVSSSVHSK Unmodified 1070.572 0.57202253 4383 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 15.869 12.573 2 0.011777 18565 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.607 35.906 74630000 48603000 14984000 11043000 0 0 0 0 0 0 0 0 0 0 0 0 42213 4383 37776 351956;351957;351958 278773 278773 1 QLVTETLQQASR Unmodified 1372.731 0.73104237 3105 Q7Z589 EMSY Protein EMSY yes yes 0 0 0 By MS/MS 10 0 1 1 53.218 53.293 2 0.0077032 60424 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 70.942 29.493 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42214 3105 37777 351959 278774 278774 1 QLVTITTK Unmodified 902.54368 0.54368251 2382 Q14161 GIT2 ARF GTPase-activating protein GIT2 yes yes 0 0 0 By MS/MS 2 0 1 1 46.257 40.81 2 0.042552 53272 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.598 30.636 34109000 0 34109000 0 0 0 0 0 0 0 0 0 0 0 0 0 42215 2382 37778 351960 278775 278775 1 QLVTITTR Unmodified 930.54983 0.54983053 5126 Q9Y2X7 GIT1 ARF GTPase-activating protein GIT1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 43.664 43.866 2 0.042907 49938 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 49.442 23.884 41660000 0 0 0 0 7046100 0 7126200 0 0 0 11127000 0 0 5587400 10773000 42216 5126 37779 351961;351962;351963;351964;351965 278776 278776 1 QLVTNACLIK Unmodified 1158.6431 0.64307898 4069 Q99873 PRMT1 Protein arginine N-methyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.56 3.86 3 1 5 1 2 1 1 1 1 1 1 60.229 57.823 2 0.00023241 77353 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 119.21 57.52 1159300000 183350000 836250000 7889100 7389800 0 0 0 0 0 0 32035000 26046000 0 22605000 43757000 42217 4069 37780 351966;351967;351968;351969;351970;351971;351972;351973;351974 278777;278778;278779;278780;278781;278782;278783;278784;278785 278780 7 QLWDSPETAPAAR Unmodified 1440.6997 0.69974224 5260 Q9Y613 FHOD1 FH1/FH2 domain-containing protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 57.718 57.758 2 0.0095111 65800 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 69.979 48.516 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42218 5260 37781 351975 278786 278786 1 QLYEEEIR Unmodified 1078.5295 0.52948901 67 CON__P05787;P05787;CON__Q9H552 KRT8 Keratin, type II cytoskeletal 8 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 41.546 41.608 2 0.0067838 46267 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 97.093 72.274 + 210980000 0 0 0 30598000 0 56002000 0 0 0 48499000 0 0 39924000 35961000 0 42219 67 37782 351976;351977;351978;351979;351980 278787;278788;278789;278790;278791 278788 4 QLYETTDTTTRLQAEK Unmodified 1896.9429 0.94288564 4923 Q9UIA9 XPO7 Exportin-7 yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 46.431 43.271 3 8.9157E-05 56562 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.657 69.182 30699000 0 24409000 6289800 0 0 0 0 0 0 0 0 0 0 0 0 42220 4923 37783 351981;351982;351983 278792;278793;278794 278792 3 QLYLERVLK Unmodified 1160.6917 0.69174374 1836 P61160 ACTR2 Actin-related protein 2 yes yes 0 0 1 By MS/MS 2 0 1 1 77.918 69.787 3 0.041976 91820 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.853 19.84 15635000 15635000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42221 1836 37784 351984 278795 278795 1 QLYLPMLFK Oxidation (M) 1167.6362 0.63620269 237 O14980 XPO1 Exportin-1 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 88.499 88.639 2 0.038595 102843 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 40.098 27.814 13934000 0 0 0 0 0 2238400 0 1223200 831260 2085400 0 0 0 0 7555800 42222 237 37785 351985;351986;351987;351988;351989 278796 278796 1 QLYQTLTDYDIR Unmodified 1527.7569 0.75692277 1964 P68400;Q8NEV1 CSNK2A1;CSNK2A3 Casein kinase II subunit alpha;Casein kinase II subunit alpha 3 yes no 0 0 0 By MS/MS 10 0 1 1 75.935 76.222 2 0.00020289 87537 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.58 92.888 8546500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8546500 42223 1964 37786 351990 278797 278797 1 QLYVLGHEAMK Unmodified 1287.6645 0.66454271 1137 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 53.856 54.514 2 0.0018231 61014 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.552 5.2995 6215700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6215700 42224 1137 37787 351991;351992 278798;278799 278798 2 QLYVLGHEAMK Oxidation (M) 1303.6595 0.65945733 1137 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 1 0 By MS/MS 2 0 2 2 54.036 45.973 2;3 0.01087 63345 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.654 40.499 52090000 52090000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42225 1137 37787 351993;351994 278800;278801 278800 1638 1 QMAAVLLR Unmodified 900.52151 0.52150728 149 O00410 IPO5 Importin-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 58.083 58.14 2 0.034341 65885 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 53.163 24.989 85097000 0 0 0 3463300 3247100 10655000 5389800 0 0 9658700 11273000 0 5683200 5669900 30057000 42226 149 37788 351995;351996;351997;351998;351999;352000;352001;352002;352003 278802;278803 278802 2 QMAFMLGR 2 Oxidation (M) 984.45211 0.45210709 2252 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 0 2 0 By MS/MS By MS/MS 10 0 2 1 1 43.585 43.068 2 0.017293 48667 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 45.718 34.89 17131000 0 0 0 5731000 11400000 0 0 0 0 0 0 0 0 0 0 42227 2252 37789 352004;352005 278804;278805 278804 3671;3672 2 QMASQAPAVNTLTESTLK Oxidation (M) 1904.9513 0.95134183 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 2 2 1 2 2 2 1 64.845 64.9 2;3 1.8564E-47 73670 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 155.43 140.53 214440000 0 0 0 11062000 14389000 11862000 22001000 23485000 20529000 17038000 10971000 32126000 18815000 19144000 13022000 42228 1364 37790 352006;352007;352008;352009;352010;352011;352012;352013;352014;352015;352016;352017;352018;352019;352020;352021;352022;352023;352024;352025;352026;352027 278806;278807;278808;278809;278810;278811;278812;278813;278814;278815;278816;278817;278818;278819;278820;278821;278822;278823 278811 2119 18 QMASQAPAVNTLTESTLK Unmodified 1888.9564 0.95642721 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 2 1 1 1 1 1 2 2 2 2 2 70.344 70.446 2;3 9.7183E-33 80848 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 153.39 124.63 118340000 0 0 0 3840900 8176400 6264200 6266400 10080000 5279100 7972200 10185000 15998000 10638000 12843000 20800000 42229 1364 37790 352028;352029;352030;352031;352032;352033;352034;352035;352036;352037;352038;352039;352040;352041;352042;352043;352044;352045 278824;278825;278826;278827;278828;278829;278830;278831;278832;278833;278834;278835 278834 12 QMDFPGESSNNR Unmodified 1380.5728 0.57282717 2456 Q14966 ZNF638 Zinc finger protein 638 yes yes 0 0 0 By MS/MS 10 0 1 1 40.643 40.925 2 0.026987 44619 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 52.49 48.024 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42230 2456 37791 352046 278836 278836 1 QMDPGDFINSSETR Oxidation (M) 1611.6835 0.68349983 456 O75122 CLASP2 CLIP-associating protein 2 yes yes 0 1 0 By MS/MS 10 0 1 1 51.348 51.411 2 0.0025245 58178 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 68.069 61.215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42231 456 37792 352047 278837 278837 584 1 QMDPGDFINSSETR Unmodified 1595.6886 0.68858521 456 O75122 CLASP2 CLIP-associating protein 2 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 66.687 66.932 2 0.00058538 76819 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 66.262 50.009 5064300 0 0 0 0 0 0 0 2136500 0 0 2927800 0 0 0 0 42232 456 37792 352048;352049 278838 278838 1 QMDPTDFVNSSETR Unmodified 1625.6991 0.69914989 3094 Q7Z460 CLASP1 CLIP-associating protein 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 63.188 63.018 2 0.0012212 72098 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 80.979 74.739 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42233 3094 37793 352050;352051 278839;278840 278839 2 QMDPTDFVNSSETR Oxidation (M) 1641.6941 0.69406451 3094 Q7Z460 CLASP1 CLIP-associating protein 1 yes yes 0 1 0 By MS/MS By matching By MS/MS By matching 10 0 4 1 1 1 1 47.92 48.098 2 0.00034409 54538 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 68.069 61.536 15237000 0 0 0 0 3576700 0 0 0 0 4160500 0 4582400 2917200 0 0 42234 3094 37793 352052;352053;352054;352055 278841;278842 278842 4702 2 QMDSNWTLMK 2 Oxidation (M) 1284.5479 0.54785797 4578 Q9NQW7 XPNPEP1 Xaa-Pro aminopeptidase 1 yes yes 0 2 0 By MS/MS 2 0 1 1 44.684 39.465 2 0.033722 51267 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 54.982 37.469 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42235 4578 37794 352056 278843 278843 1 QMDSNWTLMK Unmodified 1252.558 0.55802872 4578 Q9NQW7 XPNPEP1 Xaa-Pro aminopeptidase 1 yes yes 0 0 0 By MS/MS 2 0 1 1 73.432 67.888 2 0.023148 85860 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.67 45.018 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42236 4578 37794 352057 278844 278844 1 QMEKIQPALQEK Unmodified 1441.7599 0.75989966 4013 Q99471 PFDN5 Prefoldin subunit 5 yes yes 0 0 1 By MS/MS 2 0 1 1 50.019 42.119 3 0.020457 58266 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 44.564 19.442 8429900 8429900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42237 4013 37795 352058 278845 278845 0 QMELDTAAAK Oxidation (M) 1092.5121 0.51212439 3542 Q8WUF5 PPP1R13L RelA-associated inhibitor yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 18.668 18.851 2 0.0065759 18673 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 56.81 29.673 32398000 0 0 0 0 0 5237600 6182400 5020100 0 6513300 5605200 0 0 3839300 0 42238 3542 37796 352059;352060;352061;352062;352063;352064;352065 278846;278847;278848;278849;278850 278848 5036 5 QMELDTAAAK Unmodified 1076.5172 0.51720977 3542 Q8WUF5 PPP1R13L RelA-associated inhibitor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 33.354 33.562 2 0.002198 37204 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 85.676 50.182 102170000 0 0 0 6438300 8355900 9684900 0 0 0 11628000 13786000 13658000 9307300 9687900 19629000 42239 3542 37796 352066;352067;352068;352069;352070;352071;352072;352073;352074 278851;278852;278853;278854;278855;278856;278857;278858;278859;278860 278859 8 QMELLENK Oxidation (M) 1019.4957 0.49574604 4167 Q9BUP3 HTATIP2 Oxidoreductase HTATIP2 yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 24.34 24.662 2 0.022619 25748 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 53.166 27.272 7583200 0 0 0 0 0 0 0 0 0 2612700 4970500 0 0 0 0 42240 4167 37797 352075;352076 278861;278862 278862 2 QMENTALQNEVQR Oxidation (M) 1575.7311 0.73111872 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.157 33.342 2 9.8417E-10 36299 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 116.23 79.899 144990000 0 0 0 12729000 11424000 8394500 13497000 11484000 12955000 10230000 13604000 13224000 16217000 10164000 11068000 42241 2556 37798 352077;352078;352079;352080;352081;352082;352083;352084;352085;352086;352087;352088 278863;278864;278865;278866;278867;278868;278869;278870;278871;278872 278867 4204 10 QMENTALQNEVQR Unmodified 1559.7362 0.7362041 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.218 41.397 2 4.301E-62 45149 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 185.18 119.87 150130000 0 0 0 8682100 8682000 6176600 8187000 16519000 8331100 12932000 17999000 17206000 16798000 9563400 19051000 42242 2556 37798 352089;352090;352091;352092;352093;352094;352095;352096;352097;352098;352099;352100 278873;278874;278875;278876;278877;278878;278879;278880;278881;278882;278883;278884 278876 12 QMEQISQFLQAAER Oxidation (M) 1693.8094 0.80936904 1391 P37802 TAGLN2 Transgelin-2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 1 1 2 1 1 2 2 2 2 1 2 80.021 80.111 2;3 7.2121E-101 92390 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 202.65 175.32 521480000 0 0 0 8588300 8515100 17209000 37878000 14389000 11795000 52721000 68803000 73851000 24762000 21029000 181940000 42243 1391 37799 352101;352102;352103;352104;352105;352106;352107;352108;352109;352110;352111;352112;352113;352114;352115;352116;352117;352118 278885;278886;278887;278888;278889;278890;278891;278892;278893;278894;278895;278896;278897;278898;278899;278900;278901 278889 2156 15 QMEQISQFLQAAER Unmodified 1677.8145 0.81445442 1391 P37802 TAGLN2 Transgelin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 4 1 1 2 86.088 86.248 2;3 2.7661E-22 99430 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 176.42 154.43 36917000 0 0 0 0 0 0 0 0 0 0 2330900 0 0 2070300 32515000 42244 1391 37799 352119;352120;352121;352122 278902;278903;278904 278902 2 QMERAMLENEK Oxidation (M) 1393.633 0.63298458 1198 P26038 MSN Moesin yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2 0 5 1 2 2 22.319 18.593 2;3 1.3384E-14 23443 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 163.16 106.73 180820000 15539000 47753000 117530000 0 0 0 0 0 0 0 0 0 0 0 0 42245 1198 37800 352123;352124;352125;352126;352127 278905;278906 278905 1732;1738 1 QMERAMLENEK Unmodified 1377.6381 0.63806996 1198 P26038 MSN Moesin yes yes 0 0 1 By MS/MS 2 0 1 1 30.847 27.651 3 0.0080137 34839 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 61.435 38.209 68287000 0 0 68287000 0 0 0 0 0 0 0 0 0 0 0 0 42246 1198 37800 352128 278907 278907 1 QMERAMLENEK 2 Oxidation (M) 1409.6279 0.6278992 1198 P26038 MSN Moesin yes yes 0 2 1 By MS/MS By matching By MS/MS 2 0 3 1 1 1 13.746 10.532 3 0.0035139 13612 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 70.942 57.133 135520000 13770000 33207000 88540000 0 0 0 0 0 0 0 0 0 0 0 0 42247 1198 37800 352129;352130;352131 278908 278908 1732;1738 0 QMEYERQVASLK Oxidation (M) 1496.7293 0.72932781 3421 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 41.023 35.881 3 0.013154 49306 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.207 40.156 44452000 10122000 0 34330000 0 0 0 0 0 0 0 0 0 0 0 0 42248 3421 37801 352132;352133 278909;278910 278909 4969 1 QMEYERQVASLK Unmodified 1480.7344 0.73441319 3421 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 yes yes 0 0 1 By MS/MS 2 0 1 1 50.051 46.135 3 0.026276 58134 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 41.242 29.323 18002000 0 0 18002000 0 0 0 0 0 0 0 0 0 0 0 0 42249 3421 37801 352134 278911 278911 1 QMFAQMYQK Oxidation (M) 1189.526 0.52600031 1100 P20073 ANXA7 Annexin A7 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.4 3.2 3 12 1 2 1 1 2 1 1 2 1 1 1 1 40.126 39.424 2 0.003673 50773 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.43 98.287 92808000 0 37726000 0 2752000 2608500 12170000 3128200 3627200 0 15691000 5695800 5939500 3469500 0 0 42250 1100 37802 352135;352136;352137;352138;352139;352140;352141;352142;352143;352144;352145;352146;352147;352148;352149 278912;278913;278914;278915;278916;278917 278915 1582 5 QMFAQMYQK Unmodified 1173.5311 0.53108569 1100 P20073 ANXA7 Annexin A7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 53.899 52.965 2 0.00059271 72115 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 122.79 99.771 237350000 59049000 31760000 0 0 0 18665000 2914000 3613300 1817800 21503000 21245000 15668000 11176000 10003000 39938000 42251 1100 37802 352150;352151;352152;352153;352154;352155;352156;352157;352158;352159;352160;352161 278918;278919;278920;278921;278922;278923 278922 6 QMFAQMYQK 2 Oxidation (M) 1205.5209 0.52091494 1100 P20073 ANXA7 Annexin A7 yes yes 0 2 0 By MS/MS By matching 2 0 3 2 1 29.207 24.223 2 0.043225 33688 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.676 53.32 21694000 7597700 14097000 0 0 0 0 0 0 0 0 0 0 0 0 0 42252 1100 37802 352162;352163;352164 278924;278925 278924 1582 2 QMFGPQVLTTR Oxidation (M) 1292.6547 0.6547063 2255 Q13227 GPS2 G protein pathway suppressor 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 62.712 62.763 2 0.00194 71977 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 65.347 53.121 73630000 0 0 0 6764100 6597200 6876600 6037600 8407400 5296700 8071200 9835200 0 0 7426600 8317500 42253 2255 37803 352165;352166;352167;352168;352169;352170;352171;352172;352173;352174 278926;278927;278928;278929;278930;278931;278932 278932 3675 6 QMFHDALREPGK Oxidation (M) 1443.6929 0.69288272 3213 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 yes yes 0 1 1 By MS/MS By matching 10 0 2 1 1 28.128 28.643 3 0.0018969 30985 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 54.023 48.521 16580000 0 0 0 0 0 0 0 0 0 0 0 0 9518400 0 7061300 42254 3213 37804 352175;352176 278933 278933 4831 1 QMFLATWK Unmodified 1023.5212 0.52117293 2178 Q10567 AP1B1 AP-1 complex subunit beta-1 yes yes 0 0 0 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 76.432 76.633 2 0.041805 87960 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.833 29.313 13812000 0 0 0 0 0 0 1244700 2138200 1810200 0 0 0 0 0 8619100 42255 2178 37805 352177;352178;352179;352180 278934 278934 1 QMFLTQTDTGDDR Oxidation (M) 1542.662 0.6620361 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 2 1 2 2 40.644 40.817 2 7.2536E-13 45186 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 129.16 101.14 216490000 0 0 0 14463000 13394000 18782000 14594000 13865000 5425200 18607000 24399000 35334000 11946000 21631000 24053000 42256 1986 37806 352181;352182;352183;352184;352185;352186;352187;352188;352189;352190;352191;352192;352193;352194;352195;352196;352197;352198;352199;352200;352201;352202;352203 278935;278936;278937;278938;278939;278940;278941;278942;278943;278944;278945;278946;278947 278944 3233 12 QMFLTQTDTGDDR Unmodified 1526.6671 0.66712148 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 52.882 52.976 2 2.3565E-41 59742 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 171.62 158.26 172360000 0 0 0 6277900 7430600 25584000 7317300 6873400 4072600 14259000 20893000 0 16112000 15427000 48115000 42257 1986 37806 352204;352205;352206;352207;352208;352209;352210;352211;352212;352213;352214 278948;278949;278950;278951;278952;278953;278954;278955;278956;278957;278958 278953 11 QMGQPCDAYQK Unmodified 1324.554 0.55400598 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.852 24.057 2 0.00052464 25092 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 82.426 75.366 98161000 0 0 0 48054000 3068700 3083200 2876000 4001300 2483100 5240600 5938400 5366500 8373000 3807300 5869300 42258 1029 37807 352215;352216;352217;352218;352219;352220;352221;352222;352223;352224;352225;352226 278959;278960;278961;278962;278963;278964;278965;278966;278967;278968 278965 9 QMGQPCDAYQK Oxidation (M) 1340.5489 0.5489206 1029 P15924 DSP Desmoplakin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 14.97 15.079 2 0.00016897 14534 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 105.4 97.176 79609000 0 0 0 43928000 4556400 0 0 0 4701800 0 0 12659000 13764000 0 0 42259 1029 37807 352227;352228;352229;352230;352231 278969;278970;278971;278972;278973 278972 1444 5 QMINLAESK Unmodified 1032.5274 0.52738052 2376 Q14149 MORC3 MORC family CW-type zinc finger protein 3 yes yes 0 0 0 By MS/MS 2 0 1 1 71.9 66.173 2 0.025057 84019 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.1 56.449 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42260 2376 37808 352232 278974 278974 1 QMLDDFGPHR Unmodified 1214.5502 0.55024123 816 P06132 UROD Uroporphyrinogen decarboxylase yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 49.427 49.9 3 0.011279 55217 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.297 41.544 18820000 0 0 0 0 0 0 0 0 0 0 0 0 0 4206300 14613000 42261 816 37809 352233;352234 278975 278975 1 QMLESNK Unmodified 848.4062 0.40620276 128 O00203 AP3B1 AP-3 complex subunit beta-1 yes yes 0 0 0 By MS/MS 2 0 1 1 10.788 7.5229 2 0.027336 10350 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.602 32.826 40727000 0 40727000 0 0 0 0 0 0 0 0 0 0 0 0 0 42262 128 37810 352235 278976 278976 1 QMLGLQGLLPPK Oxidation (M) 1309.7428 0.74279303 1154 P23368 ME2 NAD-dependent malic enzyme, mitochondrial yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 81.442 81.534 2 0.0010763 94909 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 66.27 54.223 59661000 0 0 0 0 5961600 7358100 3756100 6198900 6414000 8207000 8398500 13367000 0 0 0 42263 1154 37811 352236;352237;352238;352239;352240;352241;352242;352243 278977;278978;278979 278979 1667 3 QMLPIVLK Oxidation (M) 956.57287 0.57287415 1272 P30154 PPP2R1B Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 74.761 70.455 2 0.040113 88459 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.081 18.756 24331000 0 24331000 0 0 0 0 0 0 0 0 0 0 0 0 0 42264 1272 37812 352244;352245 278980 278980 1 QMLPIVLK Unmodified 940.57796 0.57795953 1272 P30154 PPP2R1B Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform yes yes 0 0 0 By MS/MS 2 0 1 1 85.017 80.274 2 0.018796 99785 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.029 54.671 20025000 0 20025000 0 0 0 0 0 0 0 0 0 0 0 0 0 42265 1272 37812 352246 278981 278981 1 QMLPLNTNIR Oxidation (M) 1214.6441 0.64414162 237 O14980 XPO1 Exportin-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 2 1 2 2 57.205 57.321 2 0.0010925 65032 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 94.309 69.534 248920000 0 0 0 15867000 14938000 38084000 19832000 19531000 11234000 26091000 20826000 24699000 9630700 19740000 28445000 42266 237 37813 352247;352248;352249;352250;352251;352252;352253;352254;352255;352256;352257;352258;352259;352260;352261;352262;352263;352264;352265;352266;352267;352268;352269 278982;278983;278984;278985;278986;278987;278988;278989;278990;278991;278992;278993;278994;278995 278982 320 14 QMLPLNTNIR Unmodified 1198.6492 0.64922699 237 O14980 XPO1 Exportin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.302 69.378 2 0.0043308 79749 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 73.233 51.77 136850000 0 0 0 4706200 5603100 16092000 7717400 8580400 5286100 10029000 13376000 23589000 8944500 11222000 21706000 42267 237 37813 352270;352271;352272;352273;352274;352275;352276;352277;352278;352279;352280;352281 278996 278996 1 QMLTAAHALAVDAK Oxidation (M) 1454.7551 0.75514863 2114 Q05397 PTK2 Focal adhesion kinase 1 yes yes 0 1 0 By MS/MS 2 0 1 1 55.259 47.15 3 0.0026304 64431 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.812 39.267 36746000 36746000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42268 2114 37814 352282 278997 278997 3418 1 QMLTAAHALAVDAK Unmodified 1438.7602 0.76023401 2114 Q05397 PTK2 Focal adhesion kinase 1 yes yes 0 0 0 By MS/MS 2 0 2 2 68.225 59.93 2;3 0.0031028 80149 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.92 66.769 167590000 167590000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42269 2114 37814 352283;352284 278998;278999;279000 279000 3 QMMEAATR Unmodified 936.41572 0.41572158 323 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 17.219 17.381 2 0.0076382 16055 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.954 38.415 83805000 0 0 0 5941900 5284200 8256200 6133400 7450200 4720000 7964300 13362000 12013000 0 0 12679000 42270 323 37815 352285;352286;352287;352288;352289;352290;352291;352292;352293;352294 279001;279002;279003;279004;279005;279006;279007;279008;279009 279003 8 QMMEAATR Oxidation (M) 952.41064 0.41063621 323 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 yes yes 0 1 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 7.2095 7.321 2 0.021749 5242 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 53.968 33.686 40792000 0 0 0 3651700 4641200 0 582720 3643000 0 5132000 9242900 3584800 5512500 4801400 0 42271 323 37815 352295;352296;352297;352298;352299;352300;352301;352302;352303 279010;279011;279012;279013 279010 4 QMNAIIDTVINYK Oxidation (M) 1537.781 0.78102903 1655 P51531 SMARCA2 Probable global transcription activator SNF2L2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 80.578 80.703 2 0.0056664 92932 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 67.726 53.956 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42272 1655 37816 352304;352305;352306;352307 279014;279015;279016;279017 279017 2664 4 QMNIPGGDR Unmodified 986.46036 0.46036359 4880 Q9UGI8 TES Testin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 31.155 31.379 2 0.0052256 32985 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.713 61.727 49072000 0 0 0 3479200 0 3134400 0 3766400 0 4182400 8694800 0 3645000 6393800 15776000 42273 4880 37817 352308;352309;352310;352311;352312;352313;352314;352315 279018;279019;279020;279021 279018 4 QMNIPGGDRSTPAAVGAMEDK Oxidation (M) 2159.994 0.9939517 4880 Q9UGI8 TES Testin yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 54.024 49.165 3 9.3967E-09 63697 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.574 74.8 37670000 0 32324000 5346100 0 0 0 0 0 0 0 0 0 0 0 0 42274 4880 37818 352316;352317 279022;279023 279022 6238 1 QMNIPGGDRSTPAAVGAMEDK Unmodified 2143.999 0.99903708 4880 Q9UGI8 TES Testin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 66.073 60.082 3 1.4698E-13 77340 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.807 71.264 76614000 6744200 60806000 9063600 0 0 0 0 0 0 0 0 0 0 0 0 42275 4880 37818 352318;352319;352320 279024;279025;279026;279027 279025 4 QMNMSPPPGNAGPVIMSIEEK Oxidation (M) 2242.0432 0.043210083 3140 Q86U42 PABPN1 Polyadenylate-binding protein 2 yes yes 0 1 0 By MS/MS 2 0 1 1 82.045 77.341 3 0.00049546 96201 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 47.155 38.108 31333000 0 31333000 0 0 0 0 0 0 0 0 0 0 0 0 0 42276 3140 37819 352321 279028 279028 4763;4764 1 QMNPFIEDILNR Oxidation (M) 1504.7344 0.73441319 344 O43592 XPOT Exportin-T yes yes 0 1 0 By MS/MS By matching By matching By MS/MS 10 0 4 1 1 1 1 86.814 86.919 2 0.014111 100637 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.434 59.907 8617200 0 0 0 0 0 1217800 0 0 0 1795000 0 0 0 987830 4616500 42277 344 37820 352322;352323;352324;352325 279029 279029 429 0 QMNPHIR Oxidation (M) 910.44432 0.4443196 1137 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 1 0 By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 6.847 6.9676 2 0.031542 3932 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 65.263 46.598 47125000 0 0 0 2449100 2276200 3142900 3443600 0 1681300 4847100 7635800 3918900 2679900 5738700 9311400 42278 1137 37821 352326;352327;352328;352329;352330;352331;352332;352333;352334;352335;352336 279030 279030 1 QMNPHIR Unmodified 894.4494 0.44940497 1137 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.08 14.242 2 0.044016 12823 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 66.994 56.177 53909000 0 0 0 1541400 1201300 2944900 1958300 1568300 1278200 4645800 6022100 5696700 2591000 5547400 18914000 42279 1137 37821 352337;352338;352339;352340;352341;352342;352343;352344;352345;352346;352347;352348 279031 279031 1 QMPEPEQLK Unmodified 1098.5379 0.53794521 417 O60610 DIAPH1 Protein diaphanous homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.865 41.043 2 0.012989 45633 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 60.478 44.275 235090000 0 0 0 14261000 14190000 22386000 13669000 15710000 11398000 22045000 25069000 26059000 20417000 23598000 26289000 42280 417 37822 352349;352350;352351;352352;352353;352354;352355;352356;352357;352358;352359;352360 279032;279033;279034;279035;279036;279037;279038;279039;279040 279032 9 QMPEPEQLK Oxidation (M) 1114.5329 0.53285983 417 O60610 DIAPH1 Protein diaphanous homolog 1 yes yes 0 1 0 By MS/MS 2 0 1 1 27.523 23.218 2 0.043502 30633 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.984 43.716 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42281 417 37822 352361 279041 279041 1 QMPFTEMSEENITIK 2 Oxidation (M) 1828.8223 0.82230149 1474 P43246 MSH2 DNA mismatch repair protein Msh2 yes yes 0 2 0 By MS/MS By matching By MS/MS By MS/MS 7 3.69 1 1 3 2 1 1 1 64.091 61.849 2 0.00042393 71296 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 55.401 48.959 43566000 0 34306000 0 1644100 0 4540500 3075400 0 0 0 0 0 0 0 0 42282 1474 37823 352362;352363;352364;352365;352366 279042;279043 279042 2323;2324 2 QMPFTEMSEENITIK Unmodified 1796.8325 0.83247225 1474 P43246 MSH2 DNA mismatch repair protein Msh2 yes yes 0 0 0 By MS/MS 2 0 2 2 85.593 80.819 2;3 0.0021486 100637 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.162 87.883 244430000 0 244430000 0 0 0 0 0 0 0 0 0 0 0 0 0 42283 1474 37823 352367;352368 279044;279045 279044 1 QMQVLHPAAR Unmodified 1149.6077 0.60769653 1642 P50991 CCT4 T-complex protein 1 subunit delta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 1 2 2 2 2 2 2 2 2 2 2 2 29.047 29.261 2;3 0.0015449 31633 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 107.66 77.052 1568100000 0 0 0 60702000 71714000 104110000 83365000 92464000 53323000 183350000 201640000 198860000 105770000 145040000 267790000 42284 1642 37824 352369;352370;352371;352372;352373;352374;352375;352376;352377;352378;352379;352380;352381;352382;352383;352384;352385;352386;352387;352388;352389;352390;352391 279046;279047;279048;279049;279050;279051;279052;279053;279054;279055;279056;279057 279054 7 QMQVLHPAAR Oxidation (M) 1165.6026 0.60261115 1642 P50991 CCT4 T-complex protein 1 subunit delta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 9.08 2.56 3 23 1 1 1 3 3 2 1 2 1 2 3 1 1 2 2 16.546 16.236 2;3 0.0040531 15177 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 66.073 49.533 723350000 60177000 13165000 8380600 80948000 60683000 81945000 47885000 36427000 3716900 66745000 90037000 13844000 7770600 64196000 87434000 42285 1642 37824 352392;352393;352394;352395;352396;352397;352398;352399;352400;352401;352402;352403;352404;352405;352406;352407;352408;352409;352410;352411;352412;352413;352414;352415;352416;352417 279058;279059;279060;279061;279062;279063;279064;279065 279061 2647 6 QMREMEENFAVEAANYQDTIGR 2 Oxidation (M) 2633.1486 0.14861445 870 P08670 VIM Vimentin yes yes 0 2 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 70.61 70.67 3 2.5753E-54 81031 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 114.88 113.18 310640000 0 0 0 5593200 13297000 28030000 14744000 23772000 27804000 52719000 28719000 58840000 19534000 0 37589000 42286 870 37825 352418;352419;352420;352421;352422;352423;352424;352425;352426;352427;352428 279066;279067;279068;279069;279070;279071;279072;279073;279074;279075;279076;279077;279078;279079;279080;279081 279079 1116;1123 16 QMRHQSESQGVGLSDK Unmodified 1785.8428 0.84279444 1396 P38398 BRCA1 Breast cancer type 1 susceptibility protein yes yes 0 0 1 By MS/MS 2 0 1 1 21.452 16.632 3 0.040459 24107 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 27.208 17.15 4719300 4719300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42287 1396 37826 352429 279082 279082 1 QMSGAQIK Oxidation (M) 877.43275 0.43275186 2521;2520 Q15365;Q15366;P57721 PCBP1;PCBP2;PCBP3 Poly(rC)-binding protein 1;Poly(rC)-binding protein 2;Poly(rC)-binding protein 3 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 1 2 1 2 2 2 2 2 1 1 2 6.4683 6.6088 2 0.0030422 4002 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 130.77 75.324 675100000 0 0 0 36280000 33672000 56492000 69860000 44964000 38028000 86568000 79547000 60142000 49582000 45015000 74947000 42288 2520;2521 37827 352430;352431;352432;352433;352434;352435;352436;352437;352438;352439;352440;352441;352442;352443;352444;352445;352446;352447;352448 279083;279084;279085;279086;279087;279088;279089;279090;279091;279092;279093;279094;279095;279096 279084 4146;4151 11 QMSGAQIK Unmodified 861.43784 0.43783723 2521;2520 Q15365;Q15366;P57721 PCBP1;PCBP2;PCBP3 Poly(rC)-binding protein 1;Poly(rC)-binding protein 2;Poly(rC)-binding protein 3 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 13.368 13.509 2 0.025549 11999 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.604 28.419 756710000 0 0 0 57523000 44711000 0 55181000 55150000 39514000 101940000 0 98594000 83904000 45296000 174900000 42289 2520;2521 37827 352449;352450;352451;352452;352453;352454;352455;352456;352457;352458 279097;279098;279099;279100 279097 2 QMSSFVQNGSTFVK Oxidation (M) 1574.7399 0.73989249 1355 P35573 AGL Glycogen debranching enzyme;4-alpha-glucanotransferase;Amylo-alpha-1,6-glucosidase yes yes 0 1 0 By MS/MS 2 0 1 1 62.165 56.272 2 0.001025 72196 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.171 62.817 9552100 0 9552100 0 0 0 0 0 0 0 0 0 0 0 0 0 42290 1355 37828 352459 279101;279102 279101 2065 2 QMTDPNVALTFLEK Oxidation (M) 1621.8022 0.8021584 5036 Q9UNM6 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 2 2 2 2 1 1 2 2 2 1 1 1 83.809 83.851 2;3 1.074E-12 97025 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 105.03 95.599 333620000 0 0 0 18519000 29199000 42280000 13390000 9893900 6126300 61554000 59301000 57019000 8308900 5990900 22041000 42291 5036 37829 352460;352461;352462;352463;352464;352465;352466;352467;352468;352469;352470;352471;352472;352473;352474;352475;352476;352477;352478 279103;279104;279105;279106;279107;279108;279109;279110;279111;279112;279113;279114;279115;279116;279117 279104 6385 13 QMTDVLLTPATDALK Unmodified 1615.8491 0.84910859 3311 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.67 2.98 2 10 2 1 1 1 1 1 1 1 1 1 1 84.254 83.514 2;3 4.4716E-45 103396 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 158.34 143.92 261890000 0 167580000 0 1804700 0 5557900 4510100 11151000 9169500 12496000 15626000 14387000 6221200 13387000 0 42292 3311 37830 352479;352480;352481;352482;352483;352484;352485;352486;352487;352488;352489;352490 279118;279119;279120;279121;279122;279123;279124;279125;279126;279127;279128 279120 9 QMTTQGEELREQK Unmodified 1576.7515 0.75151981 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 21.299 21.509 3 0.01134 21275 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 30.862 27.609 71713000 0 0 0 4709000 3950500 9377500 5286200 6281300 0 5673900 5590000 7083900 6511700 5475700 11773000 42293 2291 37831 352491;352492;352493;352494;352495;352496;352497;352498;352499;352500;352501 279129;279130;279131 279130 3 QMVEHGGFYR Unmodified 1222.5553 0.55532661 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.049 31.238 3 0.020253 34282 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 34.692 22.479 83699000 0 0 0 4502800 4117600 7918200 4370200 6889800 3170900 5926700 6825500 13677000 4371600 7361700 14567000 42294 2392 37832 352502;352503;352504;352505;352506;352507;352508;352509;352510;352511;352512;352513 279132 279132 1 QMVEILHK Oxidation (M) 1012.5376 0.53755128 570 O76003 GLRX3 Glutaredoxin-3 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 33.059 28.268 2 0.011259 35847 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 98.523 75 55353000 37573000 0 17780000 0 0 0 0 0 0 0 0 0 0 0 0 42295 570 37833 352514;352515 279133;279134 279134 729 2 QMVEILHK Unmodified 996.54264 0.54263666 570 O76003 GLRX3 Glutaredoxin-3 yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 48.139 42.263 2 0.010113 58879 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 113.5 84.161 210810000 183010000 0 27801000 0 0 0 0 0 0 0 0 0 0 0 0 42296 570 37833 352516;352517 279135 279135 1 QMVETELK Oxidation (M) 992.48485 0.48484701 1882 P62258 YWHAE 14-3-3 protein epsilon yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.15 2.35 1 2 23 1 2 2 2 2 2 2 2 2 2 2 1 2 2 22.967 22.639 2 0.0085899 23660 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 73.26 34.454 560020000 139360 50210000 0 23378000 12900000 22353000 17682000 16284000 12769000 34018000 74965000 95003000 16316000 53370000 130640000 42297 1882 37834 352518;352519;352520;352521;352522;352523;352524;352525;352526;352527;352528;352529;352530;352531;352532;352533;352534;352535;352536;352537;352538;352539;352540;352541;352542;352543 279136;279137;279138;279139;279140;279141;279142;279143;279144;279145;279146;279147;279148;279149;279150;279151;279152 279136 3055 15 QMVETELK Unmodified 976.48993 0.48993238 1882 P62258 YWHAE 14-3-3 protein epsilon yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 34.103 33.889 2 0.011003 36067 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.923 43.098 683140000 0 163780000 0 12962000 13643000 19543000 14114000 14304000 7681100 28716000 85801000 75954000 15582000 38475000 192590000 42298 1882 37834 352544;352545;352546;352547;352548;352549;352550;352551;352552;352553;352554;352555;352556 279153;279154;279155;279156;279157;279158;279159;279160;279161;279162;279163;279164 279157 11 QMVIDVLHPGK Oxidation (M) 1251.6645 0.66454271 1916 P62847 RPS24 40S ribosomal protein S24 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.22 3.33 8 28 3 1 4 2 3 3 2 3 3 1 2 3 2 2 2 56.031 54.857 2;3 0.00043524 76296 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 99.688 90.775 1087400000 407780000 43346000 100550000 75513000 59064000 90969000 13311000 63862000 54430000 5283100 13133000 98649000 13064000 10188000 38225000 42299 1916 37835 352557;352558;352559;352560;352561;352562;352563;352564;352565;352566;352567;352568;352569;352570;352571;352572;352573;352574;352575;352576;352577;352578;352579;352580;352581;352582;352583;352584;352585;352586;352587;352588;352589;352590;352591;352592 279165;279166;279167;279168;279169;279170;279171;279172;279173;279174;279175;279176;279177;279178;279179;279180;279181;279182;279183;279184;279185 279171 3097 12 QMVIDVLHPGK Unmodified 1235.6696 0.66962808 1916 P62847 RPS24 40S ribosomal protein S24 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.67 1.6 1 23 1 2 2 2 2 2 2 2 2 2 2 1 2 68.297 68.032 2;3 0.0047809 78083 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 76.221 64.586 680700000 30762000 0 0 34611000 29623000 62399000 36044000 49768000 40930000 52793000 65100000 91691000 44119000 41058000 101800000 42300 1916 37835 352593;352594;352595;352596;352597;352598;352599;352600;352601;352602;352603;352604;352605;352606;352607;352608;352609;352610;352611;352612;352613;352614;352615;352616 279186;279187;279188;279189;279190;279191;279192;279193;279194;279195;279196;279197;279198 279186 11 QNADPQAVTMPATETK Oxidation (M) 1716.7989 0.79886394 5031 Q9UNF1 MAGED2 Melanoma-associated antigen D2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 30.967 31.156 2 1.2881E-84 34266 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 189.3 184.2 434910000 0 0 0 28365000 32489000 42816000 44097000 27419000 32235000 45498000 41195000 51379000 41653000 20522000 27238000 42301 5031 37836 352617;352618;352619;352620;352621;352622;352623;352624;352625;352626;352627;352628;352629 279199;279200;279201;279202;279203;279204;279205;279206;279207;279208;279209;279210;279211 279210 6379 13 QNADPQAVTMPATETK Unmodified 1700.8039 0.80394931 5031 Q9UNF1 MAGED2 Melanoma-associated antigen D2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 44.551 44.108 2 2.2231E-130 49220 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 209.25 192.22 578020000 4380900 0 0 27962000 36206000 60993000 30549000 43073000 30194000 59582000 62819000 61128000 46236000 40737000 74162000 42302 5031 37836 352630;352631;352632;352633;352634;352635;352636;352637;352638;352639;352640;352641;352642 279212;279213;279214;279215;279216;279217;279218;279219;279220;279221;279222;279223;279224;279225;279226;279227;279228 279224 17 QNADPQAVTMPATETKK Unmodified 1828.8989 0.89891233 5031 Q9UNF1 MAGED2 Melanoma-associated antigen D2 yes yes 0 0 1 By matching By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 36.437 36.562 3 0.016715 40403 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 25.611 18.381 15251000 0 0 0 0 2808700 0 3672600 3209300 0 0 0 5560700 0 0 0 42303 5031 37837 352643;352644;352645;352646 279229;279230 279230 2 QNAPLTSIQIR Unmodified 1239.6935 0.69353465 3460 Q8NHV4 NEDD1 Protein NEDD1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 63.994 64.079 2 0.021002 73190 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 46.406 25.706 55851000 0 0 0 2915300 3459000 5179300 4041800 3326200 0 5701000 6017500 7404300 5617500 4572000 7617400 42304 3460 37838 352647;352648;352649;352650;352651;352652;352653;352654;352655;352656;352657 279231;279232 279232 2 QNAPMTLEEFRK Oxidation (M) 1478.7188 0.71876312 3615 Q92538 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 45.562 45.042 3 0.00067085 50494 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 62.258 45.726 60033000 0 0 14484000 0 0 11694000 0 0 0 10364000 0 14862000 8628200 0 0 42305 3615 37839 352658;352659;352660;352661;352662;352663;352664;352665;352666;352667 279233;279234;279235;279236;279237;279238;279239;279240;279241;279242 279239 5116 9 QNAPMTLEEFRK Unmodified 1462.7238 0.7238485 3615 Q92538 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 56.531 56.357 3 0.0028268 63178 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 48.513 39.559 102240000 0 0 7905900 4028100 4771400 10111000 5020500 7785700 5179000 10302000 8321500 7961700 6852800 6387600 17609000 42306 3615 37839 352668;352669;352670;352671;352672;352673;352674;352675;352676;352677;352678;352679;352680 279243;279244;279245;279246 279245 3 QNASLQAAITDAEQR Unmodified 1614.7962 0.79616182 100 CON__Q7RTT2;CON__Q8N1N4-2;Q8N1N4 KRT78 Keratin, type II cytoskeletal 78 yes no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 2 1 2 1 2 1 2 1 2 1 1 1 66.656 66.717 2;3 6.3258E-07 76511 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 106.49 95.662 + 99398000 0 0 0 22666000 2564500 10014000 4203900 16427000 3520600 9675800 4561400 12143000 5147500 3275200 5199900 42307 100 37840 352681;352682;352683;352684;352685;352686;352687;352688;352689;352690;352691;352692;352693;352694;352695;352696;352697 279247;279248;279249;279250;279251;279252;279253 279248 7 QNAVNSNQSNVVIEDFESSLTR Unmodified 2450.1674 0.16735928 4844 Q9UBK8 MTRR Methionine synthase reductase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 7 3.69 1 1 3 2 1 1 1 90.382 88.851 3 0.0059008 103149 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 26.754 23.091 27321000 0 19397000 0 0 0 0 0 0 0 2634700 1423500 0 0 0 3866500 42308 4844 37841 352698;352699;352700;352701;352702 279254;279255 279254 2 QNCDQFEK Unmodified 1067.4342 0.43420842 65 CON__P02769 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.278 12.427 2 0.0045353 11010 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 130.27 130.27 + 128860000 0 0 0 11535000 18057000 6492500 7473700 6260700 6684100 18386000 15930000 15506000 7334600 4241500 10956000 42309 65 37842 352703;352704;352705;352706;352707;352708;352709;352710;352711;352712;352713;352714 279256;279257;279258;279259;279260;279261 279259 2 QNCELFEQLGEYK Unmodified 1656.7454 0.7453718 64 CON__P02768-1;P02768 ALB Serum albumin yes no 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 78.631 78.653 2 3.7564E-62 91190 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 185.96 179.3 + 53839000 0 0 0 37045000 0 2111500 0 4601600 0 0 3156900 6924200 0 0 0 42310 64 37843 352715;352716;352717;352718;352719 279262;279263;279264;279265 279264 4 QNCFDDFQCAAEYLIK Unmodified 2020.8659 0.86589764 1533 P48147 PREP Prolyl endopeptidase yes yes 0 0 0 By MS/MS 2 0 1 1 96.007 91.186 2 0.00060981 113021 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.5 86.072 13278000 0 13278000 0 0 0 0 0 0 0 0 0 0 0 0 0 42311 1533 37844 352720 279266 279266 1 QNCVTELASHPSREK Unmodified 1754.837 0.83698078 2663 Q32P28 LEPRE1 Prolyl 3-hydroxylase 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 4 2 2 33.372 28.581 3;4 0.0044862 39840 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.09 39.658 110340000 101730000 0 8615200 0 0 0 0 0 0 0 0 0 0 0 0 42312 2663 37845 352721;352722;352723;352724 279267;279268 279267 1 QNEASSHIQDDMHLVIR Unmodified 1991.9483 0.94832214 4236 Q9BXW9 FANCD2 Fanconi anemia group D2 protein yes yes 0 0 0 By MS/MS 1 0 1 1 103.15 108.41 2 0.0061292 88450 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 51.252 38.244 8772200 8772200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42313 4236 37846 352725 279269 279269 1 QNEDIEPTSSR Unmodified 1274.5739 0.57387302 4693 Q9NW82 WDR70 WD repeat-containing protein 70 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.49 18.684 2 0.0010688 19223 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 75.294 34.942 79256000 0 0 0 5550000 5698100 4566600 5239700 5668800 3374600 6965800 6270700 10468000 6613200 5977000 12863000 42314 4693 37847 352726;352727;352728;352729;352730;352731;352732;352733;352734;352735;352736;352737 279270;279271;279272;279273;279274;279275;279276;279277;279278;279279;279280;279281 279270 10 QNEDVDSAQEK Unmodified 1261.5422 0.54223854 4877 Q9UFF9 CNOT8 CCR4-NOT transcription complex subunit 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 7.4846 7.5866 2 0.00051485 5738 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 82.749 70.702 17206000 0 0 0 1330500 1257600 1882900 1242000 2058100 1204600 1401800 0 0 2887200 1407500 2533500 42315 4877 37848 352738;352739;352740;352741;352742;352743;352744;352745;352746;352747 279282;279283;279284;279285;279286;279287 279282 6 QNEEELSR Unmodified 1003.4571 0.45705235 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 11.145 11.287 2 0.037548 9074 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 51.346 18.083 49700000 0 0 0 2272500 2529800 3926600 3949600 3243800 3320500 4335400 4215900 5027300 5887400 4557800 6433000 42316 2556 37849 352748;352749;352750;352751;352752;352753;352754;352755;352756;352757;352758;352759 279288;279289 279289 2 QNEEFRPFIR Unmodified 1334.6731 0.67313356 267 O15258 RER1 Protein RER1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 57.405 57.685 3 0.010469 65603 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 41.399 11.656 111710000 0 0 0 0 0 26495000 0 8356300 14611000 0 0 15855000 16476000 12191000 17727000 42317 267 37850 352760;352761;352762;352763;352764;352765;352766 279290;279291 279290 2 QNEENILNCFDK Unmodified 1522.6722 0.67220686 3145 Q86UA1 PRPF39 Pre-mRNA-processing factor 39 yes yes 0 0 0 By MS/MS 2 0 1 1 76.532 71.695 2 0.0075505 89541 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.616 71.24 20902000 0 20902000 0 0 0 0 0 0 0 0 0 0 0 0 0 42318 3145 37851 352767 279292 279292 0 QNEENPGDEEAK Unmodified 1358.5586 0.55861689 1498 P46100 ATRX Transcriptional regulator ATRX yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 7.9424 8.0928 2 0.033028 5676 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.424 31.812 25216000 0 0 0 0 1160400 2258100 2624400 1300100 1388400 1365600 3131700 3402000 3408000 1872600 3304900 42319 1498 37852 352768;352769;352770;352771;352772;352773;352774;352775;352776;352777;352778 279293 279293 1 QNEFSVVR Unmodified 977.49304 0.49304393 5032 Q9UNH7 SNX6 Sorting nexin-6;Sorting nexin-6, N-terminally processed yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 40.601 40.764 2 0.0081134 45300 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 87.323 63.35 130890000 0 0 0 8367100 7129900 19508000 12571000 9699100 5530300 11963000 14071000 15539000 0 9356400 17158000 42320 5032 37853 352779;352780;352781;352782;352783;352784;352785;352786;352787;352788;352789 279294;279295;279296;279297;279298 279294 5 QNESATDEINHQSLIQSK Unmodified 2040.9712 0.97122565 2967 Q6SJ93 FAM111B Protein FAM111B yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 44.886 45.196 3 0.027054 50920 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 26.075 23.458 30473000 0 0 0 0 0 8053500 4232800 0 0 0 7952400 0 0 4656100 5578300 42321 2967 37854 352790;352791;352792;352793;352794 279299 279299 1 QNESTIVEPK Unmodified 1143.5772 0.57716749 2891 Q6KC79 NIPBL Nipped-B-like protein yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 25.34 25.64 2 0.0060966 26785 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 66.299 44.339 25530000 0 0 0 0 0 0 2678100 0 2754700 4160700 4709000 7151500 0 4076300 0 42322 2891 37855 352795;352796;352797;352798;352799;352800 279300;279301;279302;279303 279303 4 QNEVANVQPSSK Unmodified 1299.6419 0.64189301 3021 Q6ZW49 PAXIP1 PAX-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 20.033 20.069 2 2.5787E-05 20851 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 112.13 93.384 21081000 0 0 0 5498000 0 5598900 0 5852000 4131800 0 0 0 0 0 0 42323 3021 37856 352801;352802;352803;352804;352805 279304;279305;279306;279307;279308 279304 5 QNFHMEQLK Unmodified 1173.5601 0.56007764 3687 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 37.407 37.656 2 0.037906 41856 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 45.081 26.351 33939000 0 0 0 0 1745300 3329200 2730300 0 1348800 3984400 3183000 6019300 3091600 3012000 5494700 42324 3687 37857 352806;352807;352808;352809;352810;352811;352812;352813;352814;352815 279309 279309 1 QNFIDPLQNLCEK Unmodified 1617.7821 0.78209166 4074 Q99961 SH3GL1 Endophilin-A2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83.421 82.956 2 1.2996E-10 102894 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.34 105.34 336120000 0 150770000 1884500 5214700 8798900 19114000 8648400 8726200 9144000 18943000 19958000 20599000 15071000 14331000 34912000 42325 4074 37858 352816;352817;352818;352819;352820;352821;352822;352823;352824;352825;352826;352827;352828;352829 279310;279311;279312;279313;279314;279315;279316;279317;279318;279319;279320;279321;279322 279313 13 QNFIDPLQNLHDK Unmodified 1580.7947 0.79470526 4075 Q99962 SH3GL2 Endophilin-A1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 75.392 74.927 3 6.0873E-05 85719 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.536 67.171 173570000 0 30592000 13150000 0 4848100 17137000 6477300 10362000 6428600 10871000 16208000 13771000 9140800 8573500 26015000 42326 4075 37859 352830;352831;352832;352833;352834;352835;352836;352837;352838;352839;352840;352841;352842 279323;279324;279325;279326;279327;279328;279329;279330;279331;279332;279333;279334;279335 279327 13 QNGSNDSDRYSDNEEGK Unmodified 1913.7624 0.76235509 1446 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.4658 7.5936 3 1.5746E-41 5945 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 149 144.97 319610000 0 0 0 13933000 14343000 20764000 16217000 17970000 18665000 30152000 62100000 40331000 31525000 32163000 21446000 42327 1446 37860 352843;352844;352845;352846;352847;352848;352849;352850;352851;352852;352853;352854 279336;279337;279338;279339;279340;279341;279342;279343;279344;279345;279346;279347 279344 12 QNGTVVQYLPTLQEK Unmodified 1716.9046 0.90464964 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 78.65 78.342 2 2.4022E-41 90529 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 160.86 137.01 202280000 0 21361000 0 7487400 13206000 12895000 12881000 15535000 11016000 21686000 16478000 18481000 12623000 16230000 22402000 42328 1364 37861 352855;352856;352857;352858;352859;352860;352861;352862;352863;352864;352865;352866;352867 279348;279349;279350;279351;279352;279353;279354;279355;279356;279357;279358;279359;279360 279349 13 QNHEQEVNTLR Unmodified 1366.6589 0.65894006 86 CON__Q14525;Q14525 KRT33B Keratin, type I cuticular Ha3-II no no 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 15.737 16.055 3 0.011772 14725 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.782 25.053 + 24666000 0 0 0 0 0 0 0 7246300 0 0 0 0 0 0 17419000 42329 86 37862 352868;352869 279361 279361 1 QNHPEAGEVFVR Unmodified 1381.6739 0.67386184 3662 Q92793 CREBBP CREB-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 37.391 37.538 3 0.0031027 42095 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 56.122 45.197 79619000 0 0 0 7098300 7150800 0 0 7481700 8090400 0 12869000 0 14778000 8096400 14055000 42330 3662 37863 352870;352871;352872;352873;352874;352875;352876;352877 279362;279363;279364;279365;279366;279367;279368 279368 7 QNHPESGEVTVR Unmodified 1351.648 0.64804102 2171 Q09472 EP300 Histone acetyltransferase p300 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 14.968 15.13 3 0.032254 14656 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 25.647 16.215 33289000 0 0 0 0 4184200 0 0 6005900 0 6755900 16343000 0 0 0 0 42331 2171 37864 352878;352879;352880;352881 279369 279369 1 QNIFGPSQK Unmodified 1017.5243 0.52434406 2838 Q63HN8 RNF213 E3 ubiquitin-protein ligase RNF213 yes yes 0 0 0 By MS/MS 2 0 1 1 40.558 33.882 2 0.0062909 47034 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 106.94 76.328 21722000 21722000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42332 2838 37865 352882 279370 279370 0 QNINIMVK Oxidation (M) 974.5219 0.52190122 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 1 0 By MS/MS 10 0 1 1 39.481 40.233 2 0.019442 43975 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 56.091 37.712 22143000 0 0 0 0 0 0 0 0 0 0 0 22143000 0 0 0 42333 3023 37866 352883 279371 279371 4635 1 QNINLSAPIMSR Unmodified 1342.7027 0.70271913 2415 Q14566 MCM6 DNA replication licensing factor MCM6 yes yes 0 0 0 By MS/MS 10 0 1 1 70.587 70.561 2 0.034054 81241 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 50.108 37.532 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42334 2415 37867 352884 279372 279372 1 QNIVLPSDEK Unmodified 1141.5979 0.59790293 2063 Q01804 OTUD4 OTU domain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 43.522 43.539 2 0.0050759 48745 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 85.862 69.086 34406000 0 0 0 5456700 3974300 0 4545500 4417900 0 4173900 0 11838000 0 0 0 42335 2063 37868 352885;352886;352887;352888;352889;352890 279373;279374;279375;279376 279375 4 QNKPTGFALGSIEGR Unmodified 1573.8213 0.82125436 1981 P78406 RAE1 mRNA export factor yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 2 1 1 1 59.501 59.611 2;3 0.00011686 67373 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 74.678 68.774 435180000 0 0 0 26429000 23405000 28924000 39373000 36922000 26126000 29904000 36366000 50504000 34058000 36606000 66558000 42336 1981 37869 352891;352892;352893;352894;352895;352896;352897;352898;352899;352900;352901;352902;352903 279377;279378;279379;279380 279378 1 QNLDALLNQLK Unmodified 1268.7089 0.70885036 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS 10 0 1 1 84.561 84.74 2 0.00087888 97871 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.605 49.648 4767600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4767600 42337 2392 37870 352904 279381 279381 1 QNLDYNYYSVPIQIK Unmodified 1856.9309 0.93086439 2160 Q08554 DSC1 Desmocollin-1 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 82.833 82.732 2 4.5367E-06 95720 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 83.182 54.129 8114500 0 0 0 667990 0 0 0 7446500 0 0 0 0 0 0 0 42338 2160 37871 352905;352906 279382 279382 1 QNLEETMSSLR Unmodified 1306.6187 0.61871473 3432 Q8NEY1;Q8IVL0 NAV1;NAV3 Neuron navigator 1;Neuron navigator 3 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 63.63 63.769 2 0.00089911 73320 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 76.465 47.378 24294000 0 0 0 0 2969100 2848000 0 3702600 2041200 0 0 2816200 3513300 0 6403400 42339 3432 37872 352907;352908;352909;352910;352911;352912;352913;352914;352915 279383;279384;279385;279386;279387;279388;279389;279390 279389 8 QNLEGDHSDAPMETETSFK Oxidation (M) 2150.9062 0.90624213 686 O95757 HSPA4L Heat shock 70 kDa protein 4L yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 42.731 37.504 3 2.6679E-41 48939 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.71 128.05 106880000 7046900 96096000 3738000 0 0 0 0 0 0 0 0 0 0 0 0 42340 686 37873 352916;352917;352918 279391;279392 279392 831 2 QNLEGDHSDAPMETETSFK Unmodified 2134.9113 0.91132751 686 O95757 HSPA4L Heat shock 70 kDa protein 4L yes yes 0 0 0 By MS/MS By MS/MS 4.25 3.34 2 1 1 3 1 52.283 48.339 2;3 8.0546E-87 62720 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 181.26 168.7 218250000 0 198290000 0 0 0 0 0 0 0 0 0 0 0 0 19959000 42341 686 37873 352919;352920;352921;352922 279393;279394;279395 279393 3 QNLENVFDDVQK Unmodified 1447.6943 0.69432251 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.932 72.995 2 1.3161E-05 83433 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.45 90.019 86708000 0 0 0 4193700 3894000 9379200 5308500 6391500 6535700 8191500 9730400 9408200 7733500 6808000 9134200 42342 2291 37874 352923;352924;352925;352926;352927;352928;352929;352930;352931;352932;352933;352934 279396;279397;279398;279399;279400;279401;279402;279403;279404 279398 8 QNLEPLFEQYINNLR Unmodified 1889.9636 0.9635615 74;66;58;779 P04259;CON__P13647;P13647;CON__P02538;P02538;CON__P04259 KRT6B;KRT5;KRT6A Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 6A no no 0 0 0 By MS/MS 10 0 1 1 95.681 95.431 2 0.035844 110761 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 41.54 35.099 + 1993500 0 0 0 1993500 0 0 0 0 0 0 0 0 0 0 0 42343 779;74;58;66 37875 352935 279405 279405 1 QNLEPLFEQYINNLRR Unmodified 2046.0647 0.064672527 74;66;58;779 P04259;CON__P13647;P13647;CON__P02538;P02538;CON__P04259 KRT6B;KRT5;KRT6A Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 6A no no 0 0 1 By MS/MS 10 0 1 1 92.09 91.781 3 0.002648 106795 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 38.028 28.613 + 1837500 0 0 0 1837500 0 0 0 0 0 0 0 0 0 0 0 42344 779;74;58;66 37876 352936 279406 279406 1 QNLESNLTNLIK Unmodified 1385.7514 0.75144346 273 O15344 MID1 E3 ubiquitin-protein ligase Midline-1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 80.728 80.839 2 0.031877 93144 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.473 29.501 23550000 0 0 0 0 0 3551400 0 0 0 3291300 0 2819300 1610000 4132000 8146400 42345 273 37877 352937;352938;352939;352940;352941;352942 279407 279407 1 QNLFYLETLNTK Unmodified 1482.7718 0.77184455 3963 Q96QU8 XPO6 Exportin-6 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 82.612 82.671 2 0.00045337 95725 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 91.855 74.419 5829700 0 0 0 0 0 2698300 0 0 0 3131300 0 0 0 0 0 42346 3963 37878 352943;352944 279408;279409 279408 2 QNLIAEVSTK Unmodified 1101.603 0.60298831 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.71 3.81 2 1 4 2 1 1 1 1 1 55.268 53.489 2 6.5017E-05 68938 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.35 62.595 448050000 0 354000000 4676300 0 0 0 0 0 0 0 17637000 15189000 14661000 0 41888000 42347 1300 37879 352945;352946;352947;352948;352949;352950;352951 279410;279411;279412;279413;279414 279410 5 QNLIEELRK Unmodified 1141.6455 0.64552182 4962 Q9UKD2 MRTO4 mRNA turnover protein 4 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 57.146 55.317 3 0.017591 61702 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 35.511 7.4981 55286000 30956000 0 932010 4322700 2962300 0 6090200 5775500 0 0 0 0 0 4247900 0 42348 4962 37880 352952;352953;352954;352955;352956;352957;352958 279415;279416 279416 2 QNLLHSEK Unmodified 967.50869 0.50869399 232 O14974 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 13.806 13.269 2 0.011374 12628 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 77.072 41.578 58104000 34361000 0 6672800 1781500 1561900 990500 2009000 1431600 1041100 2212800 2716400 0 3325700 0 0 42349 232 37881 352959;352960;352961;352962;352963;352964;352965;352966;352967;352968;352969 279417;279418 279418 1 QNLLSVGDYR Unmodified 1163.5935 0.59348625 389 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 63.624 63.615 2 0.0041248 72698 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 73.985 56.599 57929000 0 0 0 5473900 5745700 5327600 5558200 5371800 4729500 7697500 9225900 0 0 8799000 0 42350 389 37882 352970;352971;352972;352973;352974;352975;352976;352977;352978;352979;352980 279419;279420;279421;279422;279423;279424;279425;279426;279427;279428 279420 10 QNLSELEQLNENLK Unmodified 1670.8475 0.84752869 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.65 1.63 1 22 1 1 2 2 2 2 2 2 2 2 2 2 1 76.137 76.004 2;3 8.7254E-20 87323 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 139.31 119.65 355790000 0 35250000 0 7964100 19759000 19045000 22299000 26332000 19024000 29515000 34569000 34688000 51885000 24191000 31269000 42351 2556 37883 352981;352982;352983;352984;352985;352986;352987;352988;352989;352990;352991;352992;352993;352994;352995;352996;352997;352998;352999;353000;353001;353002;353003 279429;279430;279431;279432;279433;279434;279435;279436;279437;279438;279439;279440;279441;279442;279443 279433 14 QNLSQFEAQAR Unmodified 1290.6317 0.63166267 3357 Q8N684 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 44.952 45.123 2 3.7294E-17 50294 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 179.51 150.55 738710000 0 0 0 35193000 48501000 47314000 54238000 46199000 48202000 70196000 79535000 80266000 59477000 57455000 112140000 42352 3357 37884 353004;353005;353006;353007;353008;353009;353010;353011;353012;353013;353014;353015 279444;279445;279446;279447;279448;279449;279450;279451;279452;279453;279454;279455;279456 279449 13 QNLSQFEAQARK Unmodified 1418.7266 0.72662569 3357 Q8N684 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 37.779 37.879 3 0.003214 41846 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 47.062 39.338 161540000 0 0 0 0 4591700 16251000 18756000 0 23142000 24557000 28274000 0 45966000 0 0 42353 3357 37885 353016;353017;353018;353019;353020;353021;353022 279457;279458;279459;279460 279458 3 QNMDLGFK Unmodified 951.4484 0.44840192 3236 Q8IW75 SERPINA12 Serpin A12 yes yes 0 0 0 By MS/MS 10 0 1 1 50.203 50.368 2 0.034336 56982 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 53.166 22.498 9134800 0 0 0 0 0 0 0 9134800 0 0 0 0 0 0 0 42354 3236 37886 353023 279461 279461 1 QNMGPSGQTHPPPQTLPR Oxidation (M) 1957.9428 0.94284283 4639 Q9NTZ6 RBM12 RNA-binding protein 12 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 33.558 33.844 3 1.0153E-05 37363 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 66.965 53.791 111990000 0 0 0 0 7969300 13315000 0 0 0 13728000 18547000 17552000 10112000 13137000 17634000 42355 4639 37887 353024;353025;353026;353027;353028;353029;353030;353031 279462;279463;279464;279465;279466 279466 6051 4 QNMGPSGQTHPPPQTLPR Unmodified 1941.9479 0.94792821 4639 Q9NTZ6 RBM12 RNA-binding protein 12 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 39.859 40.311 3 7.9963E-06 44926 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 73.464 63.407 36573000 0 0 0 0 0 0 0 9693200 0 0 0 0 0 0 26880000 42356 4639 37887 353032;353033 279467 279467 1 QNMGPSGQTHPPPQTLPRSK Unmodified 2157.0749 0.074919638 4639 Q9NTZ6 RBM12 RNA-binding protein 12 yes yes 0 0 1 By MS/MS 2 0 1 1 39.264 32.703 4 0.009735 45131 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 33.707 26.313 24721000 24721000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42357 4639 37888 353034 279468;279469 279469 2 QNNEYQVLLGIK Unmodified 1417.7565 0.75652884 106 Q9C075;CON__Q9C075 KRT23 Keratin, type I cytoskeletal 23 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.673 79.716 2 0.00015893 91911 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 85.676 62.356 + 60961000 0 0 0 12912000 3304000 3516200 2440100 7222200 2906200 6238400 4279300 10843000 4216200 3083400 0 42358 106 37889 353035;353036;353037;353038;353039;353040;353041;353042;353043;353044;353045 279470;279471;279472;279473;279474;279475;279476;279477;279478;279479 279474 10 QNNFSLAMK Oxidation (M) 1067.507 0.50697943 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 36.374 35.268 2 0.0055125 39090 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 69.825 39.64 382770000 50823000 186860000 3115000 8551600 7048800 15178000 10358000 9662500 8255800 11059000 10018000 11280000 18416000 18710000 13427000 42359 1986 37890 353046;353047;353048;353049;353050;353051;353052;353053;353054;353055;353056;353057;353058;353059;353060;353061 279480;279481;279482;279483;279484;279485;279486;279487;279488;279489;279490;279491;279492 279480 3234 11 QNNFSLAMK Unmodified 1051.5121 0.51206481 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 53.206 52.062 2 0.0078297 58947 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 71.379 54.416 1177700000 196580000 601030000 0 14542000 17778000 40668000 16561000 24496000 15365000 31671000 33353000 42213000 26012000 36299000 81081000 42360 1986 37890 353062;353063;353064;353065;353066;353067;353068;353069;353070;353071;353072;353073;353074;353075;353076 279493;279494;279495;279496;279497;279498;279499;279500;279501;279502;279503;279504;279505 279502 13 QNNVPQESRFNLK Unmodified 1572.8009 0.80085327 4998 Q9ULK4 MED23 Mediator of RNA polymerase II transcription subunit 23 yes yes 0 0 1 By MS/MS 2 0 1 1 50.851 42.951 3 0.013029 59248 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 33.685 20.548 13836000 13836000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42361 4998 37891 353077 279506;279507 279507 2 QNPEQSADEDAEK Unmodified 1459.6063 0.60629536 4033 Q99613;B5ME19 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 12.281 12.46 2 0.0083243 11302 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 44.309 40.292 15385000 0 0 0 968800 0 1087400 929610 934970 0 2242900 1400800 2355100 1858900 1080100 2526500 42362 4033 37892 353078;353079;353080;353081;353082;353083;353084;353085;353086;353087 279508 279508 1 QNPLLAEAYSNLGNVYK Unmodified 1892.9632 0.96322715 271 O15294 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 87.481 87.61 3 0.012328 101636 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 24.041 19.799 6476100 0 0 0 0 0 0 0 0 0 2512900 0 0 0 0 3963200 42363 271 37893 353088;353089 279509 279509 1 QNPNTQSLSQTGTELK Unmodified 1744.8592 0.85915601 37;3836 A8MPP1;Q96FC9 DDX11L8;DDX11 Putative ATP-dependent RNA helicase DDX11-like protein 8;Probable ATP-dependent RNA helicase DDX11 no no 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 2 42.989 42.782 2 0.0050963 47806 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 43.991 39.651 12116000 0 0 0 3609700 2705400 0 3361100 0 2439700 0 0 0 0 0 0 42364 37;3836 37894 353090;353091;353092;353093;353094;353095;353096 279510;279511;279512;279513;279514 279511 5 QNPQNIGDHMLTCSLSPK Unmodified 2038.9564 0.95644399 2456 Q14966 ZNF638 Zinc finger protein 638 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 67.298 65.486 3 4.5988E-05 87168 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.147 67.015 27865000 13984000 0 0 0 0 0 0 0 0 3748200 0 0 0 3706300 6426500 42365 2456 37895 353097;353098;353099;353100 279515;279516 279516 2 QNPQTLQLISK Unmodified 1268.7089 0.70885036 4664 Q9NVC6 MED17 Mediator of RNA polymerase II transcription subunit 17 yes yes 0 0 0 By MS/MS 2 0 1 1 62.096 56.221 2 0.00075988 72153 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.775 68.003 26998000 0 26998000 0 0 0 0 0 0 0 0 0 0 0 0 0 42366 4664 37896 353101 279517;279518 279518 2 QNPVVEQNSQPPSGLSSNQLSK Unmodified 2337.1561 0.15606631 261 O15164 TRIM24 Transcription intermediary factor 1-alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 2 1 1 1 54.557 54.649 3 3.7316E-10 61938 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 68.49 52.261 82302000 0 0 0 5241200 5711800 6616000 6672700 4992000 4904500 15685000 0 12006000 0 11032000 9440300 42367 261 37897 353102;353103;353104;353105;353106;353107;353108;353109;353110;353111;353112;353113 279519;279520;279521;279522;279523;279524;279525;279526;279527;279528 279526 10 QNQFYDTQVIK Unmodified 1382.683 0.68302954 4162 Q9BUJ2 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.888 57.009 2 7.4338E-05 65899 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 131.5 120.28 285590000 0 0 0 28862000 29577000 21493000 30351000 18566000 13305000 30865000 14722000 33031000 14479000 20075000 30268000 42368 4162 37898 353114;353115;353116;353117;353118;353119;353120;353121;353122;353123;353124;353125 279529;279530;279531;279532;279533;279534;279535;279536;279537;279538;279539;279540;279541;279542;279543 279541 15 QNQHEELQNVRK Unmodified 1521.7648 0.76480211 3456 Q8NHH9 ATL2 Atlastin-2 yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 11.973 11.454 3 2.0398E-08 17430 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 119.74 105.39 52306000 30018000 0 3660800 0 1389500 1819200 0 1832300 0 2053900 0 3355200 2514800 2206500 3455700 42369 3456 37899 353126;353127;353128;353129;353130;353131;353132;353133;353134;353135 279544;279545;279546;279547;279548 279545 5 QNQIPTEDGSR Unmodified 1243.5793 0.57929275 3138 Q86TU7 SETD3 Histone-lysine N-methyltransferase setd3 yes yes 0 0 0 By MS/MS 10 0 1 1 20.842 20.823 2 0.0023582 21695 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 78.934 54.779 4709900 0 0 0 0 0 4709900 0 0 0 0 0 0 0 0 0 42370 3138 37900 353136 279549 279549 1 QNQTTAISTPASSEISK Unmodified 1761.8745 0.87447172 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 44.156 44.524 2 8.9871E-37 49476 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 131.35 108.43 103980000 0 0 0 0 0 0 13361000 7595500 0 12329000 13028000 17900000 14909000 9826500 15034000 42371 1601 37901 353137;353138;353139;353140;353141;353142;353143;353144;353145;353146;353147 279550;279551;279552;279553;279554;279555;279556;279557;279558;279559;279560;279561;279562 279561 13 QNQTTSAVSTPASSETSK Unmodified 1822.8545 0.85446456 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 22.66 22.865 2;3 1.4977E-112 23371 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 196.58 174.82 264180000 0 0 0 14703000 10978000 19471000 14695000 22597000 11047000 24808000 29898000 35019000 27865000 25004000 28097000 42372 1601 37902 353148;353149;353150;353151;353152;353153;353154;353155;353156;353157;353158;353159;353160;353161;353162;353163;353164;353165;353166;353167;353168;353169;353170;353171 279563;279564;279565;279566;279567;279568;279569;279570;279571;279572;279573;279574;279575 279574 12 QNQVASPQPPHPGEITNAHNSSCISNK Unmodified 2911.3631 0.36311575 3251 Q8IWZ8 SUGP1 SURP and G-patch domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 50.149 43.547 3;4 6.5602E-11 59619 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.091 57.903 38658000 32429000 0 6229700 0 0 0 0 0 0 0 0 0 0 0 0 42373 3251 37903 353172;353173;353174 279576;279577;279578;279579;279580;279581 279576 6 QNRLLHDQIEK Unmodified 1392.7474 0.74736113 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 1 By MS/MS 2 0 2 2 34.83 28.482 2;3 0.00067914 39985 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.23 39.964 56523000 56523000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42374 965 37904 353175;353176 279582;279583;279584 279582 3 QNRPIPQWIR Unmodified 1306.7258 0.72583783 1925 Q59GN2;P62891 RPL39P5;RPL39 Putative 60S ribosomal protein L39-like 5;60S ribosomal protein L39 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 56.973 57.095 2;3 4.8705E-10 64772 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 147.4 130.46 2397700000 0 0 0 106570000 74230000 290150000 146910000 157610000 191780000 147600000 191180000 314810000 270090000 174670000 332070000 42375 1925 37905 353177;353178;353179;353180;353181;353182;353183;353184;353185;353186;353187;353188;353189;353190;353191;353192;353193;353194;353195;353196;353197;353198;353199;353200 279585;279586;279587;279588;279589;279590;279591;279592;279593;279594;279595;279596 279585 5 QNRYDGQVAVFGSDLQEK Unmodified 2052.9865 0.98648179 1137 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 64.031 64.188 3 4.0247E-05 73356 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 53.327 41.235 48583000 0 0 0 0 0 19365000 0 0 0 0 29218000 0 0 0 0 42376 1137 37906 353201;353202 279597;279598 279598 1 QNSAYNMHSILSNTSAE Unmodified 1865.8214 0.82139029 2504 Q15172 PPP2R5A Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 72.632 65.67 2 1.3182E-06 83910 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.417 82.46 57138000 21134000 36005000 0 0 0 0 0 0 0 0 0 0 0 0 0 42377 2504 37907 353203;353204 279599;279600 279599 2 QNSEQIDMQDIK Unmodified 1447.6613 0.66130782 2852 Q68CP9 ARID2 AT-rich interactive domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 47.946 48.002 2 5.9124E-06 54213 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 110.38 89.681 64517000 0 0 0 7613100 5045500 5245900 6367200 0 0 9513600 0 0 10339000 12140000 8252400 42378 2852 37908 353205;353206;353207;353208;353209;353210;353211;353212;353213;353214 279601;279602;279603;279604;279605;279606;279607;279608;279609;279610 279601 10 QNSEQIDMQDIK Oxidation (M) 1463.6562 0.65622244 2852 Q68CP9 ARID2 AT-rich interactive domain-containing protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 28.398 28.546 2 0.0036223 31052 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 54.094 34.332 15944000 0 0 0 4661900 0 0 4105000 0 0 0 0 7176800 0 0 0 42379 2852 37908 353215;353216;353217 279611;279612 279612 4507 1 QNSIENDIEEK Unmodified 1317.6048 0.6048388 2195 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 38.821 38.851 2 0.00027654 43016 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 90.827 48.432 34510000 0 0 0 3988900 3516800 5168000 4104000 3940500 0 4753200 4954300 0 4084200 0 0 42380 2195 37909 353218;353219;353220;353221;353222;353223;353224;353225 279613;279614;279615;279616;279617 279614 5 QNSIGSYVLQEK Unmodified 1364.6936 0.69359423 3283 Q8IYH5 ZZZ3 ZZ-type zinc finger-containing protein 3 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 59.457 59.567 2 0.00043839 76673 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.445 67.626 83810000 0 0 0 8100300 8359400 7370800 5403100 3839800 6357600 6539100 8650700 15829000 3718000 3562200 6080300 42381 3283 37910 353226;353227;353228;353229;353230;353231;353232;353233;353234;353235;353236;353237;353238 279618;279619;279620 279618 2 QNSPVAPTAQPK Unmodified 1236.6463 0.64625011 2921 Q6P1N0 CC2D1A Coiled-coil and C2 domain-containing protein 1A yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 22.641 22.85 2 0.0092147 23440 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 43.77 14.608 37554000 0 0 0 2395600 2683500 2950600 2792600 0 2370500 4118100 3802000 4507400 2193500 3281100 6459400 42382 2921 37911 353239;353240;353241;353242;353243;353244;353245;353246;353247;353248;353249 279621;279622;279623;279624;279625 279623 5 QNSQLPAQVQNGPSQEELEIQR Unmodified 2492.2255 0.22554286 3371 Q8N8S7 ENAH Protein enabled homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 2 1 1 67.752 67.9 3 6.0304E-72 77367 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 127.01 118.79 83914000 0 0 0 0 8258100 7934100 8616800 0 6155000 15324000 9748100 10389000 0 6781300 10708000 42383 3371 37912 353250;353251;353252;353253;353254;353255;353256;353257;353258;353259 279626;279627;279628;279629;279630;279631;279632;279633;279634 279629 9 QNSQLPAQVQNGPSQEELEIQRR Unmodified 2648.3267 0.32665389 3371 Q8N8S7 ENAH Protein enabled homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 61.792 61.948 3 9.036E-102 71145 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 144.01 133.32 418910000 0 0 0 21504000 0 58418000 26082000 25027000 33238000 41611000 43739000 51202000 27574000 29105000 61408000 42384 3371 37913 353260;353261;353262;353263;353264;353265;353266;353267;353268;353269;353270 279635;279636;279637;279638;279639;279640;279641;279642;279643;279644;279645;279646 279643 12 QNSVQEQPGTACLSK Unmodified 1645.773 0.77298354 4577 Q9NQW6 ANLN Actin-binding protein anillin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.277 31.467 2 2.3013E-10 34283 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 130.36 104.97 82302000 0 0 0 7084500 5983600 5305100 5773600 5879300 5119000 6934600 10530000 11568000 5700900 5112400 7312200 42385 4577 37914 353271;353272;353273;353274;353275;353276;353277;353278;353279;353280;353281;353282 279647;279648;279649;279650;279651;279652;279653;279654;279655;279656;279657 279648 11 QNTAPGALPPDTLAEAQPPSHPPSFNGEGLEGPR Unmodified 3448.6648 0.6647603 3012 Q6ZSZ5 ARHGEF18 Rho guanine nucleotide exchange factor 18 yes yes 0 0 0 By matching By matching By MS/MS By matching 10 0 4 1 1 1 1 80.125 80.101 3 0.0013835 92677 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 22.197 16.536 9907100 0 0 0 0 1033000 2250300 0 0 0 4747900 0 0 1875900 0 0 42386 3012 37915 353283;353284;353285;353286 279658 279658 1 QNTGVWLVK Unmodified 1043.5764 0.57637963 992 P13984 GTF2F2 General transcription factor IIF subunit 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 60.039 60.131 2 0.0071238 68541 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 73.26 40.79 86998000 0 0 0 0 8644200 9991200 11634000 0 11640000 15441000 0 13301000 16347000 0 0 42387 992 37916 353287;353288;353289;353290;353291;353292;353293 279659;279660;279661;279662;279663;279664 279661 6 QNTSRPPSMHVDDFVAAESK Unmodified 2215.0328 0.032780051 2863 Q69YN4 KIAA1429 Protein virilizer homolog yes yes 0 0 1 By MS/MS 2 0 1 1 66.612 58.317 4 0.02294 78218 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 21.599 7.0057 16489000 16489000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42388 2863 37917 353294 279665 279665 1 QNTVGETLR Unmodified 1016.5251 0.52507234 2970 Q6T4R5 NHS Nance-Horan syndrome protein yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 23.385 23.513 2 0.018109 23941 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.112 23.822 14622000 0 0 0 0 2427100 3117600 0 2399600 1355700 0 0 5322200 0 0 0 42389 2970 37918 353295;353296;353297;353298;353299 279666;279667 279666 2 QNVAYEYLCHLEEAK Unmodified 1865.8618 0.86179854 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 80.886 80.863 3 3.3575E-05 92869 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 69.878 60.746 23832000 0 0 0 1882100 2839900 2091600 4875300 4749200 7394000 0 0 0 0 0 0 42390 1518 37919 353300;353301;353302;353303;353304;353305;353306 279668;279669;279670 279670 3 QNVIMFVGLQGSGK Oxidation (M) 1492.7708 0.77079869 1826 P61011 SRP54 Signal recognition particle 54 kDa protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 77.558 76.988 2 3.9724E-14 89567 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 115.29 101.35 132050000 5137900 0 0 5800000 7373600 9276000 9608400 10671000 8801700 11701000 13099000 15037000 11549000 8638000 15355000 42391 1826 37920 353307;353308;353309;353310;353311;353312;353313;353314;353315;353316;353317;353318;353319 279671;279672;279673;279674;279675;279676;279677;279678;279679;279680;279681;279682;279683;279684 279682 2968 13 QNVIMFVGLQGSGK Unmodified 1476.7759 0.77588407 1826 P61011 SRP54 Signal recognition particle 54 kDa protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 81.882 82.005 2 0.0087823 103429 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.342 60.874 8394200 0 0 0 0 0 0 0 0 3260800 0 0 0 2156300 2977100 0 42392 1826 37920 353320;353321;353322;353323 279685;279686;279687;279688 279686 3 QNVVKPIDNPPHPGSTK Unmodified 1826.9639 0.96389585 4425 Q9H6T3 RPAP3 RNA polymerase II-associated protein 3 yes yes 0 0 1 By matching By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 32.934 33.015 3 0.01616 35964 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 30.072 24.53 18319000 0 0 0 0 2518600 0 0 0 2382800 5507100 7910900 0 0 0 0 42393 4425 37921 353324;353325;353326;353327 279689 279689 1 QNYHQDSEAAINR Unmodified 1544.6968 0.69678213 766 P02794 FTH1 Ferritin heavy chain;Ferritin heavy chain, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.86 19.055 3 0.0024039 18842 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 52.071 41.746 153420000 0 0 0 6741400 5530900 6263300 8713200 7409500 4123100 14140000 16345000 21100000 9456600 14071000 39529000 42394 766 37922 353328;353329;353330;353331;353332;353333;353334;353335;353336;353337;353338;353339 279690;279691;279692;279693;279694;279695;279696;279697 279695 7 QPAEHLQLLEEAAK Unmodified 1575.8257 0.82567103 1333 P33992 MCM5 DNA replication licensing factor MCM5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.65 2.94 3 1 19 1 2 1 1 1 2 2 2 1 2 2 2 2 2 64.99 64.161 2;3 0.00034134 87211 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.904 53.621 754730000 42699000 301150000 148880000 10590000 8668200 26893000 13787000 15385000 10063000 27212000 29025000 34888000 0 24475000 61015000 42395 1333 37923 353340;353341;353342;353343;353344;353345;353346;353347;353348;353349;353350;353351;353352;353353;353354;353355;353356;353357;353358;353359;353360;353361;353362 279698;279699;279700;279701;279702;279703;279704;279705;279706;279707;279708;279709;279710;279711;279712;279713;279714;279715 279709 17 QPAENVNQYLTDPK Unmodified 1615.7842 0.78420015 1137 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 58.684 58.415 2 6.0836E-08 65000 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 95.094 85.407 382440000 0 24768000 0 16171000 13383000 31169000 18500000 18741000 13502000 27190000 50908000 36413000 14466000 36199000 81029000 42396 1137 37924 353363;353364;353365;353366;353367;353368;353369;353370;353371;353372;353373;353374;353375 279716;279717;279718;279719;279720;279721;279722;279723;279724;279725;279726;279727;279728;279729 279722 14 QPAFTIHVDEAEK Unmodified 1483.7307 0.73070802 1101 P20248 CCNA2 Cyclin-A2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 63.268 58.426 3 0.014137 75342 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 41.621 32.109 16725000 0 11326000 5398900 0 0 0 0 0 0 0 0 0 0 0 0 42397 1101 37925 353376;353377 279730 279730 1 QPAIISQLDPVNER Unmodified 1578.8366 0.83657007 2152 Q08211 DHX9 ATP-dependent RNA helicase A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.633 76.691 2 0.00048069 88591 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 88.338 80.771 147440000 0 0 0 8644600 10436000 14313000 9846100 9107000 7286600 16765000 10793000 16606000 10275000 10837000 22533000 42398 2152 37926 353378;353379;353380;353381;353382;353383;353384;353385;353386;353387;353388;353389 279731;279732;279733;279734;279735;279736;279737;279738;279739 279731 7 QPAIMPGQSYGLEDGSCSYK Unmodified 2186.9613 0.96125459 1008 P14866 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.35 3.14 3 2 18 5 1 1 2 2 2 1 2 1 1 1 2 2 71.168 70.258 2;3 7.036E-112 86845 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 189.09 182.84 881920000 0 783810000 0 2940000 2993500 10289000 6803900 9364300 3143400 10212000 8997600 5547300 3504800 11249000 23066000 42399 1008 37927 353390;353391;353392;353393;353394;353395;353396;353397;353398;353399;353400;353401;353402;353403;353404;353405;353406;353407;353408;353409;353410;353411;353412 279740;279741;279742;279743;279744;279745;279746;279747;279748;279749;279750;279751;279752;279753 279744 12 QPAIMPGQSYGLEDGSCSYK Oxidation (M) 2202.9562 0.95616921 1008 P14866 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 64.516 59.184 2 4.8976E-23 75527 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.07 103.92 70264000 0 70264000 0 0 0 0 0 0 0 0 0 0 0 0 0 42400 1008 37927 353413;353414 279754 279754 1382 1 QPALSAACLGPEVTTQYGGQYR Unmodified 2366.1325 0.1324941 987 P13798 APEH Acylamino-acid-releasing enzyme yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 77.672 77.864 3 4.7508E-07 89530 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.705 44.504 11696000 0 0 0 0 0 0 0 0 0 0 0 0 0 3341800 8354300 42401 987 37928 353415;353416 279755 279755 1 QPALVGAPGLSIK Unmodified 1249.7394 0.73942221 4028 Q99583 MNT Max-binding protein MNT yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.125 74.186 2 0.035362 85523 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 48.44 11.419 51575000 0 0 0 4022900 4555500 3787800 3750600 4321400 4250500 3862600 4839300 4184000 3998900 4733500 5267800 42402 4028 37929 353417;353418;353419;353420;353421;353422;353423;353424;353425;353426;353427;353428 279756 279756 0 QPAPGPVEKPPREPAR Unmodified 1724.9322 0.93220179 2548 Q15554 TERF2 Telomeric repeat-binding factor 2 yes yes 0 0 2 By MS/MS By matching 10 0 2 1 1 27.409 27.741 4 0.040548 29881 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 22.63 20.17 14407000 0 0 0 0 0 0 0 0 0 0 0 0 9712900 4693700 0 42403 2548 37930 353429;353430 279757 279757 1 QPAPTTIGGLNK Unmodified 1195.6561 0.65608651 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43.546 42.741 2 8.3081E-07 47885 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 116.52 72.71 571710000 5593800 151450000 0 48522000 22701000 27035000 23627000 19961000 21122000 30566000 51554000 49962000 28678000 32571000 58370000 42404 1226 37931 353431;353432;353433;353434;353435;353436;353437;353438;353439;353440;353441;353442;353443;353444 279758;279759;279760;279761;279762;279763;279764;279765;279766;279767;279768;279769;279770;279771;279772;279773 279770 16 QPCPSESDIITEEDK Unmodified 1746.7618 0.76180973 505 O75475 PSIP1 PC4 and SFRS1-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.79 2.98 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 53.619 53.55 2 0.00020816 64115 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.191 79.219 333570000 10633000 0 0 34302000 21602000 27245000 23822000 23771000 21607000 31177000 31109000 34561000 21913000 22789000 29041000 42405 505 37932 353445;353446;353447;353448;353449;353450;353451;353452;353453;353454;353455;353456;353457;353458 279774;279775;279776;279777;279778;279779;279780;279781;279782;279783 279779 7 QPCPSQYSAIK Unmodified 1277.6074 0.60742176 701 O95861 BPNT1 3'(2'),5'-bisphosphate nucleotidase 1 yes yes 0 0 0 By MS/MS 2 0 1 1 40.021 35.01 2 0.0025282 45668 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.523 82.996 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42406 701 37933 353459 279784 279784 1 QPCQPPPQEPCIPK Unmodified 1674.7858 0.78579683 1139;1353 P22528;P35321 SPRR1B;SPRR1A Cornifin-B;Cornifin-A no no 0 0 0 By MS/MS 10 0 2 2 48.211 47.612 2;3 6.0067E-19 54588 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 169.21 162.27 95114000 0 0 0 95114000 0 0 0 0 0 0 0 0 0 0 0 42407 1139;1353 37934 353460;353461 279785;279786 279785 1 QPCQPPPVCPTPK Unmodified 1504.7167 0.71665463 1140;4248 P22531;Q9BYE4 SPRR2E;SPRR2G Small proline-rich protein 2E;Small proline-rich protein 2G no no 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 5 2 1 1 1 37.297 37.122 2;3 0.00057508 41199 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 77.379 67.07 163160000 0 0 0 151780000 2733500 0 3031600 0 0 0 5616500 0 0 0 0 42408 1140;4248 37935 353462;353463;353464;353465;353466 279787;279788;279789;279790;279791 279788 4 QPCTPPPQLQQQQVK Unmodified 1775.8989 0.89885275 1139 P22528 SPRR1B Cornifin-B yes yes 0 0 0 By MS/MS 10 0 1 1 42.628 42.1 3 0.003783 47820 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 41.621 38.862 7545500 0 0 0 7545500 0 0 0 0 0 0 0 0 0 0 0 42409 1139 37936 353467 279792 279792 1 QPCTPPPQPQQQQVK Unmodified 1759.8676 0.86755262 1353 P35321 SPRR1A Cornifin-A yes yes 0 0 0 By MS/MS 10 0 1 1 28.37 28.121 3 0.00082114 30414 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 56.139 50.235 10250000 0 0 0 10250000 0 0 0 0 0 0 0 0 0 0 0 42410 1353 37937 353468 279793;279794 279793 2 QPDPDENKPMEDK Unmodified 1541.6668 0.66678713 1113 P20810 CAST Calpastatin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.779 14.949 3 1.8678E-08 14048 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 107.37 95.663 146910000 0 0 0 9960300 3374600 7065000 7697200 8272000 8325100 9319300 16922000 19454000 8046400 17239000 31235000 42411 1113 37938 353469;353470;353471;353472;353473;353474;353475;353476;353477;353478;353479;353480 279795;279796;279797;279798;279799;279800;279801;279802;279803;279804;279805;279806 279800 11 QPDSGISSIR Unmodified 1058.5356 0.53563702 788 P04843 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 31.655 31.848 2 0.0077744 34733 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 61.65 33.476 106240000 0 0 0 6870500 4227000 0 4998300 5001500 2805800 4899700 6250500 9824600 16512000 0 44846000 42412 788 37939 353481;353482;353483;353484;353485;353486;353487;353488;353489;353490 279807;279808 279807 2 QPEAPGTNNVVMAK Unmodified 1454.7188 0.71876312 1204 P26374 CHML Rab proteins geranylgeranyltransferase component A 2 yes yes 0 0 0 By MS/MS 2 0 1 1 45.077 39.756 2 0.039266 51736 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 48.998 31.134 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42413 1204 37940 353491 279809 279809 1 QPEDDLGFDPFDVTRK Unmodified 1877.8796 0.8795571 675 O95628 CNOT4 CCR4-NOT transcription complex subunit 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 81.877 82.016 3 0.0040634 94678 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 31.876 26.502 36898000 0 0 0 0 0 3740600 1538300 2596700 2883100 3969800 3420300 3264500 1766100 3852700 9865500 42414 675 37941 353492;353493;353494;353495;353496;353497;353498;353499;353500;353501 279810;279811;279812;279813 279812 4 QPEEVFDVLEK Unmodified 1331.6609 0.66089712 2250;2227 Q13188;Q13043 STK3;STK4 Serine/threonine-protein kinase 3;Serine/threonine-protein kinase 3 36kDa subunit;Serine/threonine-protein kinase 3 20kDa subunit;Serine/threonine-protein kinase 4;Serine/threonine-protein kinase 4 37kDa subunit;Serine/threonine-protein kinase 4 18kDa subunit no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 78.021 78.119 2 0.00059879 89384 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 79.974 55.944 78945000 0 0 0 0 5582900 11099000 5426200 0 5025500 8198000 10534000 9432700 7162600 6436400 10048000 42415 2250;2227 37942 353502;353503;353504;353505;353506;353507;353508;353509;353510;353511 279814;279815;279816;279817;279818;279819;279820;279821;279822;279823 279820 10 QPEGLELK Unmodified 912.49165 0.49164694 4449 Q9H8G2 CAAP1 Caspase activity and apoptosis inhibitor 1 yes yes 0 0 0 By MS/MS 10 0 1 1 37.686 37.983 2 0.03661 40701 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 51.787 24.825 5610700 0 0 0 0 0 0 0 0 0 0 0 0 0 5610700 0 42416 4449 37943 353512 279824 279824 1 QPEGTGMIDEEFTVAR Oxidation (M) 1794.8094 0.80942862 1328 P33176 KIF5B Kinesin-1 heavy chain yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 65.789 65.199 2 0.00045827 74666 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 59.57 49.882 44946000 0 12832000 0 0 2798600 5175900 0 0 4057900 0 6951900 4341600 4181400 0 4606600 42417 1328 37944 353513;353514;353515;353516;353517;353518;353519;353520 279825;279826;279827;279828;279829;279830;279831;279832;279833 279832 1980 9 QPEGTGMIDEEFTVAR Unmodified 1778.8145 0.814514 1328 P33176 KIF5B Kinesin-1 heavy chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 75.261 74.831 2 1.0689E-07 86023 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.552 74.295 102380000 0 45351000 0 0 3305600 14761000 0 3915900 0 7400500 7392100 3673200 0 2739900 13840000 42418 1328 37944 353521;353522;353523;353524;353525;353526;353527;353528;353529 279834;279835;279836;279837;279838;279839;279840 279838 7 QPEPARAPQGR Unmodified 1205.6265 0.62651772 2563 Q15654 TRIP6 Thyroid receptor-interacting protein 6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 2 1 2 1 1 2 2 2 1 1 1 1 8.9406 9.0697 3 0.00039743 6116 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 69.01 52.378 127450000 0 0 0 18211000 7033200 5294800 7458600 4844200 5404000 8850700 22972000 15734000 6170400 8923500 16551000 42419 2563 37945 353530;353531;353532;353533;353534;353535;353536;353537;353538;353539;353540;353541;353542;353543;353544;353545;353546 279841;279842;279843;279844;279845;279846 279844 4 QPEQATTSAQVACLYRK Unmodified 1949.9629 0.96290957 1081 P18858 LIG1 DNA ligase 1 yes yes 0 0 1 By MS/MS 2 0 1 1 55.614 47.466 3 0.027166 64992 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 23.207 16.637 10169000 10169000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42420 1081 37946 353547 279847 279847 1 QPETVLTETPQDTIELNR Unmodified 2083.0433 0.043327963 1273 P30260 CDC27 Cell division cycle protein 27 homolog yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.082 76.133 2 1.8337E-29 88021 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 139.48 129.69 69203000 0 0 0 3962600 4393100 5537600 4590600 4225400 3211100 6427300 6762700 12433000 4356000 0 13304000 42421 1273 37947 353548;353549;353550;353551;353552;353553;353554;353555;353556;353557;353558 279848;279849;279850 279848 3 QPGAAAAPAGGK Unmodified 994.51959 0.51959303 4800 Q9P0W2 HMG20B SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 9.1741 9.308 2 0.0080321 7700 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 49.418 36.459 85297000 0 0 0 4535700 7392800 6045500 8779400 7452300 4691800 3970400 11061000 12013000 6329000 4541200 8485400 42422 4800 37948 353559;353560;353561;353562;353563;353564;353565;353566;353567;353568;353569;353570 279851;279852;279853;279854 279854 4 QPGITFIAAK Unmodified 1044.5968 0.59678072 839 P07339 CTSD Cathepsin D;Cathepsin D light chain;Cathepsin D heavy chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65.621 64.512 2 0.02939 73405 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 78.264 78.264 375810000 42426000 13558000 2054000 138530000 14498000 16982000 11401000 24340000 7775800 20869000 22588000 24656000 13096000 10821000 12214000 42423 839 37949 353571;353572;353573;353574;353575;353576;353577;353578;353579;353580;353581;353582;353583;353584;353585 279855;279856;279857;279858;279859;279860 279859 1 QPGNETADTVLK Unmodified 1271.6357 0.635745 1856 P61758 VBP1 Prefoldin subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 35.63 34.293 2 1.0085E-05 37012 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 108.7 58.656 318250000 11928000 187950000 0 0 0 13690000 0 0 0 0 29310000 19644000 0 13059000 42673000 42424 1856 37950 353586;353587;353588;353589;353590;353591;353592;353593;353594;353595 279861;279862;279863;279864;279865;279866;279867;279868;279869;279870 279865 10 QPGQVIGATTPSTGSPTNK Unmodified 1839.9327 0.9326553 5000 Q9ULM3 YEATS2 YEATS domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 41.139 41.348 2 1.226E-06 45914 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 76.588 65.978 27091000 0 0 0 0 3030800 4849500 0 0 0 7416500 5872100 0 3080600 0 2841000 42425 5000 37951 353596;353597;353598;353599;353600;353601 279871;279872;279873 279872 3 QPGSSTSSSSHLAK Unmodified 1372.6583 0.65827136 2835 Q5W0B1 RNF219 RING finger protein 219 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 8.3627 6.5969 2;3 0.019257 10026 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.796 19.025 11698000 7987500 0 0 0 0 0 0 0 0 0 0 0 0 3710000 0 42426 2835 37952 353602;353603 279874;279875 279874 1 QPGVDSLSPVASLPK Unmodified 1493.809 0.80895834 4862 Q9UBW7 ZMYM2 Zinc finger MYM-type protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 9 2.65 1 7 1 1 1 1 1 1 1 1 75.563 75.037 2 0.016608 92834 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 45.891 24.205 81764000 0 57020000 0 0 3461500 3477000 4148100 2342200 0 4370200 0 0 0 2324400 4620000 42427 4862 37953 353604;353605;353606;353607;353608;353609;353610;353611 279876;279877 279877 2 QPGVSEQQR Unmodified 1027.5047 0.50467125 583 O94776 MTA2 Metastasis-associated protein MTA2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 8.0597 8.2105 2 0.0047986 6183 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 85.666 67.68 76871000 0 0 0 0 0 9509300 0 9421300 11736000 16678000 0 0 17759000 11767000 0 42428 583 37954 353612;353613;353614;353615;353616;353617 279878;279879 279878 2 QPGVSEQQRHQLK Unmodified 1533.8012 0.80118762 583 O94776 MTA2 Metastasis-associated protein MTA2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 15.887 12.312 2;3 0.0054097 18349 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.021 66.262 159440000 153380000 0 6054200 0 0 0 0 0 0 0 0 0 0 0 0 42429 583 37955 353618;353619;353620 279880;279881 279881 1 QPIELLSMK Unmodified 1057.5842 0.58416712 560 O75934 BCAS2 Pre-mRNA-splicing factor SPF27 yes yes 0 0 0 By MS/MS 10 0 1 1 74.386 74.539 2 0.046123 85825 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 59.245 35.817 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42430 560 37956 353621 279882 279882 1 QPIPAAYNR Unmodified 1028.5403 0.54032847 2916 Q6P1J9 CDC73 Parafibromin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 33.586 33.723 2 0.0016199 36882 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 129.68 92.524 352160000 0 0 0 19313000 25112000 22837000 26791000 20260000 19672000 35379000 51793000 62290000 38094000 30617000 0 42431 2916 37957 353622;353623;353624;353625;353626;353627;353628;353629;353630;353631;353632 279883;279884;279885;279886;279887;279888;279889;279890;279891;279892;279893 279885 9 QPIPVASHAVGQPVSTGGQTLVAK Unmodified 2341.2754 0.27539358 4995 Q9ULH7 MKL2 MKL/myocardin-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.195 64.286 3 0.00041277 73547 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 33.4 32.642 105940000 0 0 0 6702600 7141100 7930000 9397600 6132000 6341400 9818400 9032600 12526000 8115800 9510100 13295000 42432 4995 37958 353633;353634;353635;353636;353637;353638;353639;353640;353641;353642;353643;353644 279894;279895;279896;279897;279898;279899;279900;279901;279902;279903 279903 10 QPISAPLFSCPDK Unmodified 1458.7177 0.71770049 3171 Q86VQ1 GLCCI1 Glucocorticoid-induced transcript 1 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 72.513 72.604 2 0.025171 83340 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 36.303 18.489 27681000 0 0 0 3842600 0 0 2899200 3162900 3767600 0 4624300 5870500 0 3514500 0 42433 3171 37959 353645;353646;353647;353648;353649;353650;353651 279904;279905;279906 279904 3 QPLALNVAYRR Unmodified 1299.7412 0.74115354 2206 Q12905 ILF2 Interleukin enhancer-binding factor 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.295 55.425 3 0.00012334 62166 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 76.282 58.146 164500000 0 0 0 8017500 7208500 17524000 9865400 9064200 9355200 19892000 11513000 19765000 12132000 14603000 25560000 42434 2206 37960 353652;353653;353654;353655;353656;353657;353658;353659;353660;353661;353662;353663 279907;279908;279909;279910;279911;279912;279913;279914;279915;279916;279917 279915 11 QPLEQNQTISPLSTYEESK Unmodified 2191.0645 0.064457335 5074 Q9UQR1 ZNF148 Zinc finger protein 148 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By matching 7.27 3.62 2 2 7 4 1 1 1 1 1 1 1 72.853 71.316 2;3 7.8803E-06 85368 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 78.794 76.439 143460000 0 90235000 0 6984200 4998400 0 6512300 0 0 0 11617000 9351100 0 5475800 8288100 42435 5074 37961 353664;353665;353666;353667;353668;353669;353670;353671;353672;353673;353674 279918;279919;279920;279921;279922 279920 5 QPLGATSGASLK Unmodified 1128.6139 0.61388734 4510 Q9HCD5 NCOA5 Nuclear receptor coactivator 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 33.635 34.015 2 0.014663 37327 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 43.419 31.212 16550000 0 0 0 0 0 0 0 0 0 3763000 0 0 3896600 3804000 5086400 42436 4510 37962 353675;353676;353677;353678 279923;279924;279925;279926 279923 4 QPLLLSEDEEDTK Unmodified 1515.7304 0.73043325 4033 Q99613;B5ME19 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 0 0 0 By MS/MS 2.5 0.5 1 1 2 61.38 56.041 2 0.010142 71766 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.014 58.711 33049000 0 33049000 0 0 0 0 0 0 0 0 0 0 0 0 0 42437 4033 37963 353679;353680 279927 279927 0 QPLSEASNQQPLSGGEEK Unmodified 1897.9017 0.9017491 4577 Q9NQW6 ANLN Actin-binding protein anillin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 17 1 2 2 2 2 1 2 1 1 1 1 1 39.752 39.874 2;3 3.3822E-38 44510 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 132.97 119.57 134890000 0 0 0 12563000 11353000 16665000 12077000 11440000 7508800 21598000 7255600 8861500 11893000 4755200 8922500 42438 4577 37964 353681;353682;353683;353684;353685;353686;353687;353688;353689;353690;353691;353692;353693;353694;353695;353696;353697 279928;279929;279930;279931;279932;279933;279934;279935;279936;279937;279938;279939;279940;279941 279928 11 QPLTATTLSDVLSR Unmodified 1500.8148 0.814772 603 O94915 FRYL Protein furry homolog-like yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 82.07 82.057 2 0.017822 95385 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 36.417 21.266 15719000 0 0 0 1596700 1951700 2168100 2618600 2533400 0 0 4850900 0 0 0 0 42439 603 37965 353698;353699;353700;353701;353702;353703 279942 279942 1 QPMLDAATGK Unmodified 1030.5117 0.51173046 1075 P18615 NELFE Negative elongation factor E yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 33.611 33.934 2 0.028083 37204 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 43.77 33.356 64397000 0 0 0 0 0 5507000 5261200 0 4561000 8726100 10132000 9433500 4533500 5109200 11133000 42440 1075 37966 353704;353705;353706;353707;353708;353709;353710;353711;353712 279943;279944 279944 2 QPMNAASGAAMSLAGAEK Unmodified 1703.7971 0.7970898 860 P08195 SLC3A2 4F2 cell-surface antigen heavy chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.17 2.36 1 1 16 2 1 2 1 2 1 1 1 2 1 2 2 64.067 63.578 2;3 2.1197E-06 80339 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.939 71.567 136910000 0 53726000 0 3088000 7513900 4080900 5469600 7104600 0 5226700 5940200 14606000 5571500 8991300 15593000 42441 860 37967 353713;353714;353715;353716;353717;353718;353719;353720;353721;353722;353723;353724;353725;353726;353727;353728;353729;353730 279945;279946;279947;279948;279949;279950 279947 6 QPMNAASGAAMSLAGAEK Oxidation (M) 1719.792 0.79200442 860 P08195 SLC3A2 4F2 cell-surface antigen heavy chain yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.12 3.26 1 1 6 2 1 1 1 1 1 1 53.8 52.437 2 0.00090419 59028 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 47.915 29.169 38877000 0 17819000 0 2859100 3125200 0 0 3221800 2782200 0 5224400 0 0 3845800 0 42442 860 37967 353731;353732;353733;353734;353735;353736;353737;353738 279951;279952;279953 279952 1084;1085 3 QPMPAAGELEER Oxidation (M) 1342.6187 0.61871473 664 O95466 FMNL1 Formin-like protein 1 yes yes 0 1 0 By MS/MS 10 0 1 1 33.89 33.942 2 0.012284 37294 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 41.399 30.235 3168600 0 0 0 0 0 0 3168600 0 0 0 0 0 0 0 0 42443 664 37968 353739 279954 279954 808 1 QPMPAAGELEER Unmodified 1326.6238 0.6238001 664 O95466 FMNL1 Formin-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 46.709 47.137 2 0.027641 53069 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 48.998 37.362 25216000 0 0 0 0 0 5584600 0 4364900 0 0 0 9130100 0 0 6136000 42444 664 37968 353740;353741;353742;353743 279955 279955 1 QPNAQPQYLHGSK Unmodified 1466.7266 0.72662569 3050 Q7L576 CYFIP1 Cytoplasmic FMR1-interacting protein 1 yes yes 0 0 0 By MS/MS 3 0 1 1 26.951 22.735 3 0.0014384 28475 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 51.135 43.844 12359000 0 12359000 0 0 0 0 0 0 0 0 0 0 0 0 0 42445 3050 37969 353744 279956 279956 1 QPNENGVSVQNENFEEIINLPIGSK Unmodified 2768.3617 0.36170199 2398 Q14244 MAP7 Ensconsin yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 94.323 90.277 3 0.019882 111985 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 21.373 11.39 18003000 0 18003000 0 0 0 0 0 0 0 0 0 0 0 0 0 42446 2398 37970 353745;353746 279957 279957 1 QPPARPPGPSTDTGALADGVVSQAVK Unmodified 2515.3031 0.3030649 3686 Q92917 GPKOW G patch domain and KOW motifs-containing protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 72.346 72.401 3 2.1357E-06 83868 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 42.106 34.891 169190000 0 0 0 7543800 13314000 16242000 16399000 0 12428000 21287000 19964000 16920000 0 13367000 31729000 42447 3686 37971 353747;353748;353749;353750;353751;353752;353753;353754;353755;353756 279958;279959;279960;279961;279962;279963;279964;279965 279964 8 QPPDVTENPYRK Unmodified 1442.7154 0.7153923 2862 Q69YN2 CWF19L1 CWF19-like protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 34.401 30.369 3 0.0048398 39865 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.674 44.439 19580000 0 15436000 4144200 0 0 0 0 0 0 0 0 0 0 0 0 42448 2862 37972 353757;353758 279966;279967;279968;279969 279968 4 QPPGPVPTPPLPSER Unmodified 1567.8358 0.83584179 5126 Q9Y2X7 GIT1 ARF GTPase-activating protein GIT1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 2 1 1 69.995 69.958 2 0.034025 80474 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 30.205 16.852 22831000 0 0 0 2180000 2036800 3531500 0 2418700 0 5891600 3447400 0 3324800 0 0 42449 5126 37973 353759;353760;353761;353762;353763;353764;353765;353766 279970;279971;279972;279973;279974 279973 5 QPPIDNIIR Unmodified 1064.5978 0.59784335 1682 P52292 KPNA2 Importin subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.726 62.821 2 0.019972 72678 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 94.302 60.506 518420000 0 0 0 39420000 28825000 42871000 35891000 33627000 26304000 58193000 54203000 62929000 49104000 35513000 51540000 42450 1682 37974 353767;353768;353769;353770;353771;353772;353773;353774;353775;353776;353777;353778 279975;279976;279977;279978 279978 2 QPPIQSTAGAVPVRNEK Unmodified 1790.9639 0.96389585 1756 P55081 MFAP1 Microfibrillar-associated protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.306 40.485 3 1.4453E-18 44881 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 100.77 86.869 436290000 0 0 0 34602000 34145000 32086000 38120000 23801000 25466000 46474000 47365000 45697000 40700000 29427000 38403000 42451 1756 37975 353779;353780;353781;353782;353783;353784;353785;353786;353787;353788;353789;353790 279979;279980;279981;279982;279983;279984;279985;279986;279987;279988;279989;279990;279991;279992;279993;279994 279982 15 QPPPPAHRGPADSLSTAAGAAELSAEGAGK Unmodified 2810.3947 0.39473345 3108 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.89 3.52 5 14 3 2 1 1 1 1 1 1 2 1 1 1 1 2 64.129 62.531 3;4 4.4161E-24 70452 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.893 56.771 509400000 264740000 0 38073000 6094500 7838000 14934000 9207300 11691000 13966000 23652000 19713000 20510000 13543000 12583000 52854000 42452 3108 37976 353791;353792;353793;353794;353795;353796;353797;353798;353799;353800;353801;353802;353803;353804;353805;353806;353807;353808;353809 279995;279996;279997;279998;279999;280000;280001;280002;280003;280004;280005;280006;280007;280008;280009;280010;280011;280012;280013 280000 16 QPPPSIRLPSAQTPNGTDYVASGK Unmodified 2480.266 0.26595111 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 2 1 69.809 69.898 3 0.0020312 79814 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 27.928 20.482 63114000 0 0 0 2454700 5274600 4342700 4846700 3695800 4313800 4919300 8668900 18862000 0 0 5735800 42453 5216 37977 353810;353811;353812;353813;353814;353815;353816;353817;353818;353819;353820 280014;280015;280016;280017;280018;280019;280020 280015 6 QPPSISAEVEK Unmodified 1183.6085 0.60846762 2086 Q03001 DST Dystonin yes yes 0 0 0 By MS/MS By MS/MS 3 0 2 1 1 21.222 17.108 3 0.026539 21358 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 31.843 5.1698 9081800 226450 8855400 0 0 0 0 0 0 0 0 0 0 0 0 0 42454 2086 37978 353821;353822 280021 280021 1 QPPSQFEPLDMK Unmodified 1415.6755 0.67550132 1334 P33993 MCM7 DNA replication licensing factor MCM7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 68.131 68.47 2 0.0014089 77996 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.524 58.928 13460000 0 0 0 0 0 0 0 3350500 0 0 0 0 0 0 10109000 42455 1334 37979 353823;353824;353825 280022;280023 280023 2 QPPSTFVPQINR Unmodified 1382.7306 0.73064844 3061 Q7LBC6 KDM3B Lysine-specific demethylase 3B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.62 65.706 2 0.0059627 74270 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 52.579 37.899 191880000 0 0 0 12742000 11431000 13388000 14004000 15913000 10983000 14857000 20198000 26075000 14270000 13826000 24193000 42456 3061 37980 353826;353827;353828;353829;353830;353831;353832;353833;353834;353835;353836;353837 280024;280025;280026 280025 3 QPPTAAGRPVDASPR Unmodified 1518.7903 0.79028858 5282 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 23.49 23.986 3 9.4169E-06 24434 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.345 50.212 36329000 0 0 0 0 0 0 0 0 0 0 0 0 0 10172000 26157000 42457 5282 37981 353838;353839 280027;280028 280027 2 QPPVSPLTLSPGPEAHQGFSR Unmodified 2201.1229 0.12291569 2975 Q6UUV7 CRTC3 CREB-regulated transcription coactivator 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 73.889 74.086 3 0.031722 85281 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 21.901 7.2067 33944000 0 0 0 0 0 0 3208600 0 0 0 0 8282900 7182200 8206600 7063700 42458 2975 37982 353840;353841;353842;353843;353844 280029 280029 1 QPQAPPTPQQTPSTQAQGLPAQAQATPQHQQQLFLK Unmodified 3888.9871 0.98709749 2651 Q2M2I8 AAK1 AP2-associated protein kinase 1 yes yes 0 0 0 By MS/MS 10 0 1 1 73.684 73.276 4 0.0012948 84691 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 19.03 17.457 10060000 0 0 0 0 10060000 0 0 0 0 0 0 0 0 0 0 42459 2651 37983 353845 280030 280030 1 QPQLGVLR Unmodified 909.5396 0.53960019 4769 Q9NZJ0 DTL Denticleless protein homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 48.719 49.059 2 0.013714 55168 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 71.715 39.244 82736000 0 0 0 0 0 12124000 5839500 0 0 11766000 11374000 13800000 9653200 5559300 12621000 42460 4769 37984 353846;353847;353848;353849;353850;353851;353852;353853 280031;280032;280033;280034;280035;280036;280037;280038;280039 280033 9 QPQPSPAEGR Unmodified 1065.5203 0.52032131 1779 P56192 MARS Methionine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.43 2.06 1 13 1 1 1 1 1 1 2 1 1 1 1 1 1 10.78 10.679 2 0.0013138 8621 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 107.69 75.373 168030000 0 13697000 0 8245900 6228400 15602000 12694000 8130800 7746100 13470000 11934000 22757000 11929000 13142000 22459000 42461 1779 37985 353854;353855;353856;353857;353858;353859;353860;353861;353862;353863;353864;353865;353866;353867 280040;280041;280042;280043;280044;280045;280046;280047;280048;280049;280050;280051;280052 280048 11 QPQRGEVSQK Unmodified 1155.5996 0.59963426 2427 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 5.6226 3.4175 2 3.3383E-06 5040 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 148.52 83.719 13369000 0 0 13369000 0 0 0 0 0 0 0 0 0 0 0 0 42462 2427 37986 353868 280053 280053 1 QPSDGMERPSSLMDSSQEK Unmodified 2107.915 0.91503268 2810 Q5VT52 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 44.76 45.073 3 1.0122E-13 50683 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 91.414 79.496 139700000 0 0 0 0 0 11427000 12290000 14139000 9980200 10365000 14673000 15143000 13398000 15570000 22711000 42463 2810 37987 353869;353870;353871;353872;353873;353874;353875;353876;353877;353878 280054;280055;280056;280057;280058;280059;280060;280061;280062;280063;280064;280065;280066;280067;280068 280066 15 QPSPEEIRER Unmodified 1239.6208 0.62076364 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.183 22.388 3 0.00089178 23275 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 93.096 81.404 259080000 0 0 0 20604000 16094000 18739000 12901000 18762000 12712000 32152000 29296000 34944000 23614000 15141000 24124000 42464 5216 37988 353879;353880;353881;353882;353883;353884;353885;353886;353887;353888;353889;353890 280069;280070;280071;280072;280073;280074;280075 280072 7 QPSVTIGR Unmodified 856.47667 0.47666558 2019 P85037 FOXK1 Forkhead box protein K1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.179 29.371 2 0.030437 31664 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 55.531 23.06 205650000 0 0 0 12940000 10194000 14509000 14618000 16021000 14045000 16848000 16278000 29420000 17917000 16630000 26229000 42465 2019 37989 353891;353892;353893;353894;353895;353896;353897;353898;353899;353900;353901;353902 280076;280077;280078 280077 3 QPSWDPSPVSSTVPAPSPLSAAAVSPSK Unmodified 2746.3814 0.3813748 4566 Q9NQC3 RTN4 Reticulon-4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 84.283 84.348 3 2.57E-26 97613 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 77.802 74.869 148880000 0 0 0 3442000 23737000 12839000 14100000 14580000 8545400 14134000 17405000 13565000 7487600 6967300 12080000 42466 4566 37990 353903;353904;353905;353906;353907;353908;353909;353910;353911;353912;353913;353914 280079;280080;280081;280082;280083;280084;280085;280086;280087;280088;280089;280090;280091;280092 280092 14 QPTEEEASSK Unmodified 1104.4935 0.49349744 2539 Q15459 SF3A1 Splicing factor 3A subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8 3.48 1 2 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 6.1705 5.7777 2 0.003743 3957 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 75.378 57.983 37025000 167630 8833000 0 2089400 2014100 4114900 3734200 2493600 3285700 1175600 2674100 1656900 1166600 1731500 1887700 42467 2539 37991 353915;353916;353917;353918;353919;353920;353921;353922;353923;353924;353925;353926;353927;353928;353929;353930 280093;280094;280095;280096;280097;280098;280099;280100;280101;280102;280103 280093 11 QPTIFQNK Unmodified 974.51853 0.5185304 1888 P62280 RPS11 40S ribosomal protein S11 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37.231 36.372 2 3.8188E-07 40344 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 158.12 106.33 2317400000 722200000 81009000 13377000 79257000 100250000 101100000 125870000 83681000 95810000 123720000 153070000 185120000 148150000 144000000 160760000 42468 1888 37992 353931;353932;353933;353934;353935;353936;353937;353938;353939;353940;353941;353942;353943;353944;353945 280104;280105;280106;280107;280108;280109;280110;280111;280112;280113;280114;280115;280116;280117;280118 280105 11 QPTNPFLEMIK Unmodified 1316.6799 0.67985842 4633 Q9NTI5 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes yes 0 0 0 By MS/MS 2 0 1 1 93.847 85.717 2 0.032295 110923 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.278 37.018 17009000 17009000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42469 4633 37993 353946 280119 280119 1 QPTNPFLEMVK Unmodified 1302.6642 0.66420836 2647 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 0 0 0 By MS/MS By MS/MS 5 3.56 1 1 1 2 1 87.957 83.913 2 0.013716 104627 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.067 57.916 112690000 0 112690000 0 0 0 0 0 0 0 0 0 0 0 0 0 42470 2647 37994 353947;353948;353949 280120;280121 280120 2 QPTPQPPVDCVK Unmodified 1364.6758 0.67583567 1160 P23490 LOR Loricrin yes yes 0 0 0 By MS/MS 10 0 1 1 42.891 42.363 2 2.6951E-05 48169 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 95.483 84.332 14369000 0 0 0 14369000 0 0 0 0 0 0 0 0 0 0 0 42471 1160 37995 353950 280122;280123 280123 2 QPTPSYLFSQDPAVTFK Unmodified 1924.9571 0.95707914 5057 Q9UPS6 SETD1B Histone-lysine N-methyltransferase SETD1B yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 84.736 84.845 2 0.0005312 98503 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 75.479 62.278 8461300 0 0 0 0 0 0 0 0 0 0 0 3841700 2430500 2189100 0 42472 5057 37996 353951;353952;353953;353954 280124;280125 280125 2 QPTPVNIR Unmodified 923.51886 0.51886475 5179 Q9Y3Y2 CHTOP Chromatin target of PRMT1 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.665 32.85 2 0.030197 35176 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.676 34.376 123420000 0 0 0 7412700 9627300 13193000 9798100 7675300 7779200 13069000 10191000 17316000 8372100 8668600 10315000 42473 5179 37997 353955;353956;353957;353958;353959;353960;353961;353962;353963;353964;353965;353966 280126 280126 1 QPTSEANCSAMFGK Unmodified 1526.6494 0.64936293 2647 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 0 0 0 By MS/MS 2 0 1 1 43.252 38.104 2 0.0011797 49448 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.171 70.535 37981000 0 37981000 0 0 0 0 0 0 0 0 0 0 0 0 0 42474 2647 37998 353967 280127 280127 1 QPTVGGTSSTPR Unmodified 1186.5942 0.59421454 2852 Q68CP9 ARID2 AT-rich interactive domain-containing protein 2 yes yes 0 0 0 By MS/MS 10 0 1 1 16.601 17.121 2 0.040531 16512 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 46.819 25.291 5965300 0 0 0 0 0 0 0 0 0 0 5965300 0 0 0 0 42475 2852 37999 353968 280128 280128 1 QPTVGGTSSTPRAQK Unmodified 1513.7849 0.78486885 2852 Q68CP9 ARID2 AT-rich interactive domain-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 17.402 14.013 3 0.0021847 20527 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.759 70.381 24491000 21531000 0 2960600 0 0 0 0 0 0 0 0 0 0 0 0 42476 2852 38000 353969;353970 280129 280129 0 QPTVTSVCSETSQELAEGQR Unmodified 2206.0172 0.017189567 3865 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 59.682 59.867 3 0.0056621 68517 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 30.969 27.219 37756000 0 0 0 0 4221000 4841900 2812300 4902900 0 0 4522600 6779100 0 4564100 5111800 42477 3865 38001 353971;353972;353973;353974;353975;353976;353977;353978 280130;280131;280132 280132 3 QPTVTSVCSETSQELAEGQRR Unmodified 2362.1183 0.11830059 3865 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 55.263 55.481 3 9.3538E-06 62383 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.784 42.665 23801000 0 0 0 0 0 3547400 2973400 3087200 0 3574100 0 0 0 3680800 6938200 42478 3865 38002 353979;353980;353981;353982;353983;353984 280133;280134;280135;280136;280137 280136 5 QPVAGSEGAQYRK Unmodified 1389.7001 0.70007659 4880 Q9UGI8 TES Testin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 2 3 2 17.855 14.36 2;3 3.6702E-09 20816 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 115.42 106.1 247230000 102470000 84318000 60445000 0 0 0 0 0 0 0 0 0 0 0 0 42479 4880 38003 353985;353986;353987;353988;353989;353990;353991 280138;280139;280140;280141;280142;280143 280141 5 QPVFGANYIK Unmodified 1135.6026 0.60259438 3726 Q969T9 WBP2 WW domain-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 69.946 63.69 2 0.034565 77809 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 57.177 39.938 353480000 214500000 138980000 0 0 0 0 0 0 0 0 0 0 0 0 0 42480 3726 38004 353992;353993;353994 280144;280145 280144 2 QPVGFVSFDSR Unmodified 1237.6091 0.60913632 3707 Q93062 RBPMS RNA-binding protein with multiple splicing yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 69.995 70.12 2 0.0079706 80892 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 62.823 50.587 58316000 0 0 0 2878900 0 6966700 5043800 3603900 4075600 9035200 5211200 4884400 4023400 4418000 8174200 42481 3707 38005 353995;353996;353997;353998;353999;354000;354001;354002;354003;354004;354005 280146;280147;280148;280149;280150 280149 5 QPVLSQTEAR Unmodified 1127.5935 0.59348625 1229 P28070 PSMB4 Proteasome subunit beta type-4 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.497 26.697 2 9.9835E-10 27554 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 150.36 122.14 237320000 0 0 0 33043000 7555600 7715400 8652000 15230000 4251400 10241000 32954000 44339000 7758300 16965000 48617000 42482 1229 38006 354006;354007;354008;354009;354010;354011;354012;354013;354014;354015;354016;354017 280151;280152;280153;280154;280155 280152 4 QPVTDPLLTPVEK Unmodified 1435.7922 0.79224564 4189 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A yes yes 0 0 0 By MS/MS 2 0 1 1 77.065 72.227 2 0.019581 90269 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 51.998 33.326 20369000 0 20369000 0 0 0 0 0 0 0 0 0 0 0 0 0 42483 4189 38007 354018 280156;280157 280157 2 QQAADLISR Unmodified 1000.5302 0.53015772 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 33.27 33.471 2 0.000169 37141 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 149.65 73.519 224180000 0 0 0 11392000 18042000 0 18075000 14445000 14295000 21318000 25024000 27248000 24192000 23125000 27028000 42484 516 38008 354019;354020;354021;354022;354023;354024;354025;354026;354027;354028;354029 280158;280159;280160;280161;280162;280163;280164;280165;280166;280167 280167 9 QQAANLLQDMGQR Oxidation (M) 1487.7151 0.71507473 412 O60563 CCNT1 Cyclin-T1 yes yes 0 1 0 By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 40.849 40.927 2 0.0078913 45630 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 42.336 29.38 22097000 0 0 0 3114800 0 4807200 3497600 0 0 0 5898300 0 4778700 0 0 42485 412 38009 354030;354031;354032;354033;354034;354035;354036 280168;280169;280170 280168 512 3 QQAANLLQDMGQR Unmodified 1471.7202 0.72016011 412 O60563 CCNT1 Cyclin-T1 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 64.735 65.056 2 0.0074452 73802 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.653 38.722 12966000 0 0 0 0 0 0 0 0 0 2744200 0 4106300 2158900 0 3956700 42486 412 38009 354037;354038;354039;354040 280171;280172 280171 2 QQAAYYAQTSPQGMPQHPPAPQGQ Unmodified 2580.1816 0.18156955 3737 Q96AE4 FUBP1 Far upstream element-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 57.908 58.097 3 1.8325E-27 65984 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 94.632 91.138 241700000 0 0 0 0 11063000 15471000 14175000 15755000 0 21129000 32191000 35661000 17858000 26146000 52247000 42487 3737 38010 354041;354042;354043;354044;354045;354046;354047;354048;354049;354050;354051 280173;280174;280175;280176;280177;280178;280179;280180;280181;280182;280183;280184;280185 280174 13 QQAAYYAQTSPQGMPQHPPAPQGQ Oxidation (M) 2596.1765 0.17648418 3737 Q96AE4 FUBP1 Far upstream element-binding protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 46.549 46.993 3 8.7749E-22 52414 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 85.855 82.328 103590000 0 0 0 0 0 0 0 0 8209700 0 17393000 26168000 13478000 14089000 24256000 42488 3737 38010 354052;354053;354054;354055;354056;354057 280186;280187;280188;280189;280190 280190 5315 5 QQAAYYGQTPGPGGPQPPPTQQGQQQAQ Unmodified 2907.3536 0.35359692 3690 Q92945 KHSRP Far upstream element-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 55.699 55.782 3 0.00021935 63123 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 29.135 26.661 65093000 0 0 0 3935100 5932800 4741800 4134700 4538900 3969800 8558500 8360100 0 5053100 4725400 11143000 42489 3690 38011 354058;354059;354060;354061;354062;354063;354064;354065;354066;354067;354068 280191;280192;280193 280191 3 QQAGAQGPGSADLEDGEMGK Oxidation (M) 1960.8432 0.84324795 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 1 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.147 32.334 2 2.488E-58 34420 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 125.61 120.33 67160000 0 0 0 6317300 5416400 3816200 5962700 5233200 3308400 5640900 8263100 8019800 6051300 3585700 5545100 42490 4285 38012 354069;354070;354071;354072;354073;354074;354075;354076;354077;354078;354079;354080 280194;280195;280196;280197;280198;280199;280200 280195 5749 7 QQAGAQGPGSADLEDGEMGK Unmodified 1944.8483 0.84833332 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 21 1 1 2 2 2 1 2 2 2 2 2 2 42.087 42.332 2;3 2.9963E-109 46904 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 180.97 174.93 160110000 0 0 0 6175000 4308300 11355000 10536000 12986000 6493300 16256000 19382000 20436000 12418000 11810000 27950000 42491 4285 38012 354081;354082;354083;354084;354085;354086;354087;354088;354089;354090;354091;354092;354093;354094;354095;354096;354097;354098;354099;354100;354101 280201;280202;280203;280204;280205 280205 5 QQAIELTQEEPYSDIIATPGPR Unmodified 2455.2231 0.22308324 382 O60216 RAD21 Double-strand-break repair protein rad21 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 9 2.45 1 6 1 2 2 2 83.66 83.188 2;3 1.7141E-10 98618 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 75.057 67.582 38799000 0 9837400 0 0 8545900 14112000 6304100 0 0 0 0 0 0 0 0 42492 382 38013 354102;354103;354104;354105;354106;354107;354108 280206;280207;280208;280209;280210;280211;280212 280211 7 QQALEVIK Unmodified 927.53893 0.53893149 5146 Q9Y3A5 SBDS Ribosome maturation protein SBDS yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 47.074 41.339 2 0.0025212 54049 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.99 38.375 338020000 14757000 319410000 3846200 0 0 0 0 0 0 0 0 0 0 0 0 42493 5146 38014 354109;354110;354111 280213;280214;280215 280214 3 QQALLLEQQR Unmodified 1225.6779 0.67788459 1784 P56524 HDAC4 Histone deacetylase 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 48.759 48.921 2 0.0060629 56085 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 66.435 48.123 66692000 0 0 0 4565400 3648500 0 6898500 0 0 8265700 10355000 9209700 8614200 0 15135000 42494 1784 38015 354112;354113;354114;354115;354116;354117;354118;354119 280216;280217;280218;280219;280220;280221 280220 6 QQAQVEVIR Unmodified 1069.588 0.58800695 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.447 33.632 2 0.02892 36640 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 48.794 20.62 136720000 0 0 0 5955200 11334000 11070000 12692000 11953000 9288500 11291000 15214000 18493000 10284000 8155000 10990000 42495 3023 38016 354120;354121;354122;354123;354124;354125;354126;354127;354128;354129;354130;354131 280222 280222 1 QQAQYLEEK Unmodified 1135.551 0.55095274 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.511 23.715 2 0.0054364 24797 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 77.732 61.192 62889000 0 0 0 3494200 2817400 5172500 3874300 3280800 3029000 5311200 5739900 7737000 8021500 4984700 9426400 42496 2193 38017 354132;354133;354134;354135;354136;354137;354138;354139;354140;354141;354142;354143 280223;280224;280225;280226;280227;280228;280229;280230;280231;280232 280224 10 QQASILGNIENLK Unmodified 1426.778 0.77799256 4650 Q9NUP7 TRMT13 tRNA:m(4)X modification enzyme TRM13 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 84.896 80.152 2 0.00080652 99684 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.866 75.841 27950000 0 27950000 0 0 0 0 0 0 0 0 0 0 0 0 0 42497 4650 38018 354144 280233 280233 1 QQDEEMLELPAPAEVAAK Oxidation (M) 1983.9459 0.9459221 1418 P40692 MLH1 DNA mismatch repair protein Mlh1 yes yes 0 1 0 By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 75.924 75.994 2 0.0017933 87839 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 41.099 27.436 38262000 0 0 0 0 5508200 5662400 0 4091600 2971600 5567400 0 6631500 4124400 3704600 0 42498 1418 38019 354145;354146;354147;354148;354149;354150;354151;354152 280234 280234 2227 1 QQDENNASRNQAIEELEK Unmodified 2114.9829 0.98285297 4811 Q9P289 STK26 Serine/threonine-protein kinase 26 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 48.207 43.443 3 3.463E-47 56378 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.24 87.703 76902000 0 72556000 4345600 0 0 0 0 0 0 0 0 0 0 0 0 42499 4811 38020 354153;354154 280235 280235 1 QQDLNPDLILQYDIR Unmodified 1842.9476 0.94757708 895 P09884 POLA1 DNA polymerase alpha catalytic subunit yes yes 0 0 0 By MS/MS 10 0 1 1 88.767 88.91 2 0.015678 102912 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.741 39.054 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42500 895 38021 354155 280236 280236 1 QQEAALELEELK Unmodified 1399.7195 0.71947463 2117 Q05682 CALD1 Caldesmon yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 71.368 70.819 2 0.00045019 80726 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.693 56.64 170690000 0 103960000 0 0 3868700 4552100 3177900 3070700 3479400 6390100 9280000 10780000 4054400 6139800 11942000 42501 2117 38022 354156;354157;354158;354159;354160;354161;354162;354163;354164;354165;354166;354167;354168;354169 280237;280238;280239;280240;280241;280242;280243;280244;280245;280246;280247;280248;280249;280250;280251;280252;280253 280242 17 QQEAALELEELKK Unmodified 1527.8144 0.81443765 2117 Q05682 CALD1 Caldesmon yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.22 2.2 1 8 1 1 1 1 1 1 1 1 1 59.122 58.786 3 0.0007448 66108 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 59.227 48.583 64294000 0 11472000 0 0 3864200 0 7570400 4785400 0 0 6771300 7811200 5068400 5564500 11386000 42502 2117 38023 354170;354171;354172;354173;354174;354175;354176;354177;354178 280254;280255;280256;280257;280258;280259 280257 6 QQEELDALK Unmodified 1072.5401 0.5400537 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 38.852 38.744 2 0.023437 43223 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.059 34.095 75996000 0 0 0 0 15020000 33802000 0 0 27174000 0 0 0 0 0 0 42503 643 38024 354179;354180;354181 280260 280260 1 QQEELDALKK Unmodified 1200.635 0.63501672 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 29.067 29.287 3 0.0029077 31697 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 46.406 38.745 152000000 0 0 0 15991000 9060100 0 13987000 12409000 0 22775000 14894000 21533000 16041000 9781600 15530000 42504 643 38025 354182;354183;354184;354185;354186;354187;354188;354189;354190;354191 280261;280262;280263;280264;280265 280263 5 QQEELLAEENQR Unmodified 1485.7059 0.70594983 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 38.453 38.88 2 0.00021321 43256 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 84.17 65.858 52453000 0 0 0 0 0 0 9616200 0 0 11314000 0 9958600 0 0 21565000 42505 2501 38026 354192;354193;354194;354195;354196;354197;354198;354199 280266;280267;280268;280269;280270;280271;280272;280273 280267 8 QQEEVFR Unmodified 934.45084 0.45084476 3049 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 yes yes 0 0 0 By MS/MS 10 0 1 1 24.533 24.201 2 0.038679 25906 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 69.383 47.702 12252000 0 0 0 0 12252000 0 0 0 0 0 0 0 0 0 0 42506 3049 38027 354200 280274 280274 1 QQEGESRLNLVQR Unmodified 1555.8067 0.80666693 719;836 P00338;P07195 LDHA;LDHB L-lactate dehydrogenase A chain;L-lactate dehydrogenase B chain no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 36.417 36.978 3 0.0037508 39786 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 40.025 26.345 331560000 0 0 0 0 0 0 0 0 0 0 67888000 37378000 0 32732000 193560000 42507 719;836 38028 354201;354202;354203;354204 280275;280276;280277;280278 280277 2 QQEGFKPNYMENR Unmodified 1639.7413 0.74128948 3589 Q8WXF1 PSPC1 Paraspeckle component 1 yes yes 0 0 1 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 38.209 38.195 3 0.0081936 41060 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 30.308 26.206 16080000 0 0 0 1431000 1800100 0 0 6515200 0 0 0 0 0 0 6334000 42508 3589 38029 354205;354206;354207;354208 280279 280279 1 QQEIILWR Unmodified 1084.6029 0.60292873 498 O75436 VPS26A Vacuolar protein sorting-associated protein 26A yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 74.977 74.933 2 0.022922 85716 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.76 45.379 18810000 0 0 0 3484900 1162500 0 0 0 0 2001200 1264400 0 0 0 10897000 42509 498 38030 354209;354210;354211;354212;354213 280280 280280 1 QQEILGVLVPR Unmodified 1250.7347 0.73467118 5209 Q9Y4R8 TELO2 Telomere length regulation protein TEL2 homolog yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 82.42 82.503 2 0.010127 95543 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 67.897 36.137 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42510 5209 38031 354214;354215 280281;280282 280281 2 QQEINSENLSAK Unmodified 1359.663 0.66302238 2895 Q6N069 NAA16 N-alpha-acetyltransferase 16, NatA auxiliary subunit yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 28.422 28.613 2 0.00024682 30455 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 110.38 84.945 1233200000 0 0 0 41285000 0 56419000 76305000 90874000 77017000 229760000 311650000 338610000 11321000 0 0 42511 2895 38032 354216;354217;354218;354219;354220;354221;354222;354223;354224 280283;280284;280285;280286;280287 280287 2 QQEIVVSR Unmodified 957.52434 0.52434406 2528 Q15393 SF3B3 Splicing factor 3B subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 25.735 25.937 2 0.004651 27222 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 109.86 50.617 567460000 0 0 0 27813000 31063000 34154000 34015000 38871000 28010000 48441000 50209000 58170000 46017000 58989000 111710000 42512 2528 38033 354225;354226;354227;354228;354229;354230;354231;354232;354233;354234;354235;354236 280288;280289;280290;280291;280292;280293;280294;280295;280296;280297;280298;280299;280300 280298 9 QQEIVVSRGK Unmodified 1142.6408 0.6407708 2528 Q15393 SF3B3 Splicing factor 3B subunit 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 21.612 17.781 3 0.010486 25317 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.6 37.588 659360000 496670000 32485000 130210000 0 0 0 0 0 0 0 0 0 0 0 0 42513 2528 38034 354237;354238;354239 280301 280301 1 QQELDLAAEQHRK Unmodified 1564.7958 0.79576789 566 O75962 TRIO Triple functional domain protein yes yes 0 0 1 By MS/MS 2 0 1 1 31.811 28.576 3 0.00095098 36174 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 70.622 61.088 3165300 0 0 3165300 0 0 0 0 0 0 0 0 0 0 0 0 42514 566 38035 354240 280302 280302 1 QQELEAVRK Unmodified 1099.5986 0.59857163 4890 Q9UH65 SWAP70 Switch-associated protein 70 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 20.195 17.039 2 0.020504 22540 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.29 56.235 25543000 0 15133000 10410000 0 0 0 0 0 0 0 0 0 0 0 0 42515 4890 38036 354241;354242 280303 280303 1 QQELTHQEHR Unmodified 1304.6222 0.62216062 1073 P18206 VCL Vinculin yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 2 1 1 1 1 1 1 2 5.8826 6.0194 2;3 0.0036108 4098 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 68.893 56.277 88783000 0 0 0 0 3054800 14606000 6387600 0 4105300 0 11635000 8650400 4651900 9045100 26647000 42516 1073 38037 354243;354244;354245;354246;354247;354248;354249;354250;354251;354252;354253 280304;280305;280306;280307;280308;280309;280310 280308 4 QQEMMAALTDAIQDK 2 Oxidation (M) 1723.7757 0.77568565 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 2 0 By matching By MS/MS By matching By matching By MS/MS By matching 10 0 6 1 1 1 1 1 1 52.362 52.511 2 0.00018232 58761 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 63.473 49.054 23990000 0 0 0 2728200 0 3954500 0 0 0 5133600 3551000 6086000 0 2537000 0 42517 3641 38038 354254;354255;354256;354257;354258;354259 280311;280312 280312 5159;5160 2 QQEMMAALTDAIQDK Unmodified 1691.7859 0.78585641 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 33.801 27.569 2;3 0.0012309 103523 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.365 63.588 32560000 32560000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42518 3641 38038 354260;354261 280313;280314 280313 2 QQEPVTSTSLVFGK Unmodified 1519.7882 0.7882229 1600 P49790 NUP153 Nuclear pore complex protein Nup153 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69.384 68.502 2 3.8268E-18 86324 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145.55 77.331 332170000 12880000 113950000 0 11239000 13550000 14938000 17668000 13205000 12158000 18643000 20194000 21062000 17664000 16463000 28558000 42519 1600 38039 354262;354263;354264;354265;354266;354267;354268;354269;354270;354271;354272;354273;354274;354275 280315;280316;280317;280318;280319;280320;280321;280322;280323;280324;280325;280326;280327 280318 13 QQEQADSLER Unmodified 1202.5527 0.55274365 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 15.406 15.588 2 0.0018863 14561 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 87.913 55.692 37216000 0 0 0 0 4766700 0 1147100 4243100 0 2567700 10664000 13828000 0 0 0 42520 2459 38040 354276;354277;354278;354279;354280;354281 280328;280329 280328 2 QQEQLHLQLLTQQQAGKPQPK Unmodified 2440.3187 0.31865538 3227 Q8IVH2 FOXP4 Forkhead box protein P4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 62.052 62.303 4 0.0015456 70655 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 37.292 25.832 84026000 0 0 0 0 0 16447000 0 9135700 4724200 8366800 7223300 8835300 6654200 8287900 14352000 42521 3227 38041 354282;354283;354284;354285;354286;354287;354288;354289;354290 280330;280331;280332;280333;280334;280335 280334 6 QQEQLQLQLLQQQHAGK Unmodified 2017.0705 0.070486187 4377 Q9H334 FOXP1 Forkhead box protein P1 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 67.243 67.563 3 0.040885 76823 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 31.319 21.179 21397000 0 0 0 0 0 0 0 0 0 11714000 0 0 0 0 9683300 42522 4377 38042 354291;354292 280336 280336 0 QQEQQLQLYSK Unmodified 1391.7045 0.70449327 3646 Q92636 NSMAF Protein FAN yes yes 0 0 0 By MS/MS 2 0 1 1 47.04 41.593 2 0.055371 54094 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 63.283 38.429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42523 3646 38043 354293 280337 280337 1 QQEQQQQQVAR Unmodified 1369.6698 0.66983909 158 O00461 GOLIM4 Golgi integral membrane protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.9357 7.0833 2 0.00026354 5069 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 105.78 94.294 39022000 0 0 0 0 2118100 2776100 4135200 2953100 5660000 4969500 4744100 0 4701300 2662200 4302900 42524 158 38044 354294;354295;354296;354297;354298;354299;354300;354301;354302;354303;354304;354305 280338;280339;280340;280341;280342;280343;280344;280345;280346 280339 9 QQEQQVPILEK Unmodified 1338.7143 0.71432967 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 53.702 53.593 2 0.0003035 57132 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 94.409 76.097 201420000 0 0 2460400 13505000 8030700 24744000 13072000 8646800 0 20642000 24952000 33406000 0 20381000 31576000 42525 1565 38045 354306;354307;354308;354309;354310;354311;354312;354313;354314;354315;354316 280347;280348;280349;280350;280351;280352;280353;280354;280355;280356;280357;280358 280356 12 QQEVEAITLELEELK Unmodified 1770.9251 0.92511031 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 94.987 91.329 3 7.4491E-05 113242 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.532 81.618 17790000 0 16780000 1009600 0 0 0 0 0 0 0 0 0 0 0 0 42526 643 38046 354317;354318 280359 280359 1 QQEVETELK Unmodified 1102.5506 0.55061839 868 P08621 SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 26.2 26.424 2 0.011037 28064 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 63.419 38.496 265820000 0 0 0 34713000 0 0 0 46781000 0 68976000 0 0 49336000 0 66011000 42527 868 38047 354319;354320;354321;354322;354323;354324;354325 280360;280361;280362;280363;280364;280365 280364 6 QQEVVVAGSSLPTSSK Unmodified 1615.8417 0.84171503 4382 Q9H3P7 ACBD3 Golgi resident protein GCP60 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS 9 2.65 2 14 1 1 2 1 1 2 1 1 1 1 1 1 2 52.259 51.493 2 2.6573E-27 58537 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 157.56 129.38 239730000 8774400 12476000 0 17671000 9187800 18842000 11411000 0 10298000 19665000 23693000 25440000 16783000 13228000 52261000 42528 4382 38048 354326;354327;354328;354329;354330;354331;354332;354333;354334;354335;354336;354337;354338;354339;354340;354341 280366;280367;280368;280369;280370;280371;280372 280366 5 QQEYEEQFK Unmodified 1227.5408 0.54078198 4308 Q9GZU8 FAM192A Protein FAM192A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.756 30.994 2 0.0049392 33250 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 85.212 59.273 128050000 0 0 0 0 6141600 5986600 8251000 10555000 5433800 12326000 21054000 15305000 11876000 12426000 18698000 42529 4308 38049 354342;354343;354344;354345;354346;354347;354348;354349;354350;354351;354352;354353 280373;280374;280375;280376;280377;280378;280379;280380;280381;280382 280380 10 QQFDLENK Unmodified 1020.4876 0.4876242 1380 P36871 PGM1 Phosphoglucomutase-1 yes yes 0 0 0 By MS/MS By MS/MS By matching 2.25 0.433 3 1 1 2 1 38.141 33.228 2 0.0025602 41569 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 120.62 99.321 1157900000 48051000 1105400000 4432600 0 0 0 0 0 0 0 0 0 0 0 0 42530 1380 38050 354354;354355;354356;354357 280383;280384;280385;280386 280385 3 QQFDWNQFR Unmodified 1267.5734 0.57341951 4814 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 73.712 73.819 2 0.037213 84621 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.716 35.33 38225000 0 0 0 0 2243500 3318800 0 4633700 2749900 3228500 0 5716700 4549700 4149700 7634300 42531 4814 38051 354358;354359;354360;354361;354362;354363;354364;354365;354366 280387 280387 1 QQFILTSPDGAGTGK Unmodified 1518.7678 0.7678218 1559 P49116 NR2C2 Nuclear receptor subfamily 2 group C member 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 63.244 61.159 2 0.0014607 77720 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.522 51.137 25597000 0 19843000 0 0 1762100 0 0 0 0 0 0 0 3991600 0 0 42532 1559 38052 354367;354368;354369;354370 280388;280389;280390 280388 2 QQFNSGRDQER Unmodified 1363.6229 0.6228889 621 O95104 SCAF4 Splicing factor, arginine/serine-rich 15 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.4885 7.5975 3 1.3517E-05 5960 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 113.63 99.372 175750000 0 0 0 7267800 10380000 10138000 9777700 13122000 11324000 15880000 39647000 21368000 19337000 17510000 0 42533 621 38053 354371;354372;354373;354374;354375;354376;354377;354378;354379;354380;354381;354382 280391;280392;280393;280394;280395;280396;280397;280398;280399;280400 280398 10 QQFQQQQLQMNK Unmodified 1547.7515 0.75146023 1784 P56524 HDAC4 Histone deacetylase 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 40.195 40.035 2 0.00013641 43559 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 99.136 77.672 10581000 0 0 0 3575600 2272700 0 2656700 0 0 0 0 0 0 2075900 0 42534 1784 38054 354383;354384;354385;354386;354387 280401;280402;280403 280401 3 QQFSTLAVR Unmodified 1048.5665 0.56654322 2649 Q2KHR3 QSER1 Glutamine and serine-rich protein 1 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 48.899 48.996 2 0.048015 56059 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 42.599 22.46 10824000 0 0 0 0 4477800 0 0 0 0 0 0 0 0 0 6346600 42535 2649 38055 354388;354389 280404 280404 1 QQFTEEEIYK Unmodified 1313.6139 0.61394692 3366 Q8N7H5 PAF1 RNA polymerase II-associated factor 1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 50.335 49.705 2 1.0687E-05 63160 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 156.46 143.1 704690000 0 202480000 0 26068000 20716000 28319000 37646000 31943000 29601000 39648000 49792000 80922000 50410000 38485000 68661000 42536 3366 38056 354390;354391;354392;354393;354394;354395;354396;354397;354398;354399;354400;354401;354402;354403 280405;280406;280407;280408;280409;280410;280411;280412;280413;280414;280415;280416;280417;280418;280419;280420;280421 280410 17 QQFVEYDK Unmodified 1055.4924 0.49237523 2400 Q14257 RCN2 Reticulocalbin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.246 34.429 2 0.032702 37998 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 54.157 34.68 137010000 0 0 0 6054600 6230200 6693700 7368200 8094200 5326100 11119000 20685000 23949000 6918900 12561000 22006000 42537 2400 38057 354404;354405;354406;354407;354408;354409;354410;354411;354412;354413;354414;354415 280422;280423 280422 2 QQFYHSVQDLSGGSR Unmodified 1707.7965 0.79649617 919 P10398 ARAF Serine/threonine-protein kinase A-Raf yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 48.312 48.534 3 0.010131 53994 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 34.909 26.785 146640000 0 0 0 0 8569500 14642000 13661000 13365000 8814300 15022000 16501000 19909000 0 14263000 21898000 42538 919 38058 354416;354417;354418;354419;354420;354421;354422;354423;354424;354425 280424;280425;280426;280427;280428;280429;280430;280431 280430 7 QQGASGEVYCPSGEK Unmodified 1595.6886 0.68858521 3108 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 25.761 26.04 2 0.00024695 26636 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.44 58.209 15345000 0 0 0 0 1589600 0 1716000 0 0 0 0 3797800 2406100 2378100 3457300 42539 3108 38059 354426;354427;354428;354429;354430;354431;354432 280432;280433;280434;280435 280432 4 QQGFNYCTSAISSPLTK Unmodified 1900.8989 0.89891233 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 0 0 By MS/MS 2 0 1 1 78.05 73.274 2 1.03E-12 91455 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.17 94.012 24511000 0 24511000 0 0 0 0 0 0 0 0 0 0 0 0 0 42540 2193 38060 354433 280436 280436 1 QQGLASYDYVR Unmodified 1298.6255 0.62551466 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 52.251 52.38 2 0.0019298 58463 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 70.056 52.817 50695000 0 0 0 6528100 3549000 0 4895400 4880200 0 4723100 7134900 12543000 0 0 6441800 42541 2501 38061 354434;354435;354436;354437;354438;354439;354440;354441 280437;280438;280439;280440;280441;280442;280443;280444 280441 8 QQGLVDGLFLLR Unmodified 1357.7718 0.77178497 2270 Q13322 GRB10 Growth factor receptor-bound protein 10 yes yes 0 0 0 By MS/MS 10 0 1 1 92.499 92.637 2 0.047524 107394 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.225 21.178 1900600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1900600 42542 2270 38062 354442 280445 280445 1 QQGPPTPFDFLGR Unmodified 1458.7256 0.72556306 3542 Q8WUF5 PPP1R13L RelA-associated inhibitor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 88.209 88.279 2 1.0295E-12 102430 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 130.98 102.26 195690000 0 0 0 7466000 8343500 14620000 12434000 13381000 13878000 25500000 16369000 20922000 13555000 13348000 35872000 42543 3542 38063 354443;354444;354445;354446;354447;354448;354449;354450;354451;354452;354453;354454 280446;280447;280448;280449;280450;280451;280452;280453;280454;280455;280456;280457;280458 280447 13 QQGRYPGVSNYQVEEDIGK Unmodified 2166.0342 0.03416026 2318 Q13564 NAE1 NEDD8-activating enzyme E1 regulatory subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 63.827 57.838 3 5.8722E-19 76889 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 113.28 104.99 49219000 15562000 15157000 18500000 0 0 0 0 0 0 0 0 0 0 0 0 42544 2318 38064 354455;354456;354457 280459;280460;280461 280460 3 QQGTSVAQSGAQAPGR Unmodified 1541.7546 0.75463136 4208 Q9BWE0 REPIN1 Replication initiator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 1 2 2 2 19.122 19.301 2;3 2.9182E-23 19294 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 148.18 138.18 548530000 0 0 0 63439000 46195000 55348000 36280000 25250000 25690000 65778000 52801000 36261000 50335000 38137000 53013000 42545 4208 38065 354458;354459;354460;354461;354462;354463;354464;354465;354466;354467;354468;354469;354470;354471;354472;354473;354474;354475;354476;354477;354478;354479;354480 280462;280463;280464;280465;280466;280467;280468;280469;280470;280471;280472;280473;280474;280475;280476;280477;280478;280479;280480;280481;280482 280478 17 QQGVLALRPYLQK Unmodified 1512.8776 0.87764703 1779 P56192 MARS Methionine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.546 70.616 3 0.0077092 80374 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 57.175 27.872 189110000 0 0 0 5750500 5183200 25820000 9798100 14626000 12552000 12408000 14568000 23654000 12236000 11408000 41104000 42546 1779 38066 354481;354482;354483;354484;354485;354486;354487;354488;354489;354490;354491;354492 280483;280484;280485;280486;280487 280486 1 QQHHQPMVQGIPEAGK Oxidation (M) 1799.8737 0.87370063 3026 Q70J99 UNC13D Protein unc-13 homolog D yes yes 0 1 0 By MS/MS 2 0 1 1 36.331 29.902 3 0.0032352 41851 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.54 35.618 7028900 7028900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42547 3026 38067 354493 280488 280488 4641 1 QQHQEQQALQQSTTAK Unmodified 1852.9028 0.90275216 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8 3.33 2 2 11 4 1 1 1 1 1 1 1 1 1 1 1 16.29 15.435 2;3 1.2743E-41 20455 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 176.51 170.28 165380000 0 101800000 0 3152200 1072500 2919500 3398100 3317200 1178900 4964100 15610000 12795000 4169300 10997000 0 42548 2495 38068 354494;354495;354496;354497;354498;354499;354500;354501;354502;354503;354504;354505;354506;354507;354508 280489;280490;280491;280492;280493;280494;280495;280496;280497 280492 9 QQHQGILSR Unmodified 1065.5679 0.56794021 1600 P49790 NUP153 Nuclear pore complex protein Nup153 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.016 15.187 2 0.0051747 13866 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.296 31.938 58367000 0 0 0 2740300 1391500 2359600 3202600 3184100 2751600 4466200 6457600 6841700 11070000 4683400 9218900 42549 1600 38069 354509;354510;354511;354512;354513;354514;354515;354516;354517;354518;354519;354520 280498;280499;280500;280501;280502;280503;280504 280500 7 QQHQQQLAEDAK Unmodified 1422.6852 0.68515481 3322 Q8N3F8 MICALL1 MICAL-like protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 7.86 3.4 1 1 5 2 1 1 1 1 1 10.092 9.2702 3 0.014341 11274 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 42.475 35.11 52529000 0 40220000 0 2386300 0 0 0 0 0 0 0 3253600 1439500 2153500 3076400 42550 3322 38070 354521;354522;354523;354524;354525;354526;354527 280505;280506 280506 1 QQHQSQAVTVPPPGLESFPSQAK Unmodified 2460.2397 0.23973636 2779 Q5T6F2 UBAP2 Ubiquitin-associated protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 14 2 2 1 1 1 1 1 1 2 2 71.665 71.614 3 1.1213E-07 80960 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.128 47.711 77794000 0 0 0 11742000 9410900 7379600 0 3419600 0 9271700 11450000 3667600 13997000 0 7456300 42551 2779 38071 354528;354529;354530;354531;354532;354533;354534;354535;354536;354537;354538;354539;354540;354541 280507;280508;280509;280510;280511;280512;280513;280514;280515;280516;280517;280518;280519 280510 12 QQHVIETLIGK Unmodified 1264.7139 0.71393574 1548 P48643 CCT5 T-complex protein 1 subunit epsilon yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 6 4 24 5 4 1 2 2 2 2 2 2 2 2 2 2 2 2 59.049 57.371 2;3 7.7822E-27 63659 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 187.55 148.25 3591600000 2200400000 306670000 42828000 36979000 30593000 127140000 60851000 50577000 50109000 118760000 115170000 105580000 64399000 100850000 180760000 42552 1548 38072 354542;354543;354544;354545;354546;354547;354548;354549;354550;354551;354552;354553;354554;354555;354556;354557;354558;354559;354560;354561;354562;354563;354564;354565;354566;354567;354568;354569;354570;354571;354572;354573;354574;354575 280520;280521;280522;280523;280524;280525;280526;280527;280528;280529;280530;280531;280532;280533;280534;280535;280536;280537;280538;280539;280540;280541;280542;280543;280544;280545;280546;280547;280548;280549;280550;280551;280552;280553;280554;280555 280521 22 QQIAEDPELTHSSSNK Unmodified 1782.8384 0.83842057 4989 Q9ULC3 RAB23 Ras-related protein Rab-23 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 7.86 3.4 1 1 5 2 1 1 1 1 1 31.757 30.666 3 0.00018495 39999 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.508 70.424 43382000 0 28947000 0 0 0 1873400 0 0 0 3616200 3065900 0 2316800 0 3562800 42553 4989 38073 354576;354577;354578;354579;354580;354581;354582 280556;280557 280556 2 QQIAEIEK Unmodified 957.51311 0.51311067 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 27.268 27.421 2 0.0060877 29413 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 103.83 60.587 298800000 0 0 0 20661000 20090000 27491000 22103000 23035000 19186000 28909000 33761000 0 30609000 29990000 42964000 42554 2930 38074 354583;354584;354585;354586;354587;354588;354589;354590;354591;354592;354593 280558;280559;280560;280561;280562;280563;280564;280565;280566 280562 9 QQIESEVANLK Unmodified 1257.6565 0.65648044 4863 Q9UBW8 COPS7A COP9 signalosome complex subunit 7a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 51.929 51.223 2 5.3115E-05 58919 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 140.11 95.359 544510000 0 292470000 0 11285000 10324000 24357000 18205000 13616000 10457000 27050000 29888000 29064000 0 18615000 59177000 42555 4863 38075 354594;354595;354596;354597;354598;354599;354600;354601;354602;354603;354604;354605;354606;354607 280567;280568;280569;280570;280571;280572;280573;280574;280575;280576;280577;280578;280579;280580 280579 12 QQIESYPTDSILEDQSDQR Unmodified 2251.024 0.024049084 2194 Q12824 SMARCB1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 69.386 69.446 3 0.0015603 79776 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 39.523 22.644 47746000 0 0 0 2795700 2341300 4995500 3518000 3126900 0 0 6233400 5796400 4474700 5247800 9215900 42556 2194 38076 354608;354609;354610;354611;354612;354613;354614;354615;354616;354617 280581;280582;280583;280584;280585 280581 3 QQIGSSAMPYK Oxidation (M) 1224.5809 0.58087266 1285 P30566 ADSL Adenylosuccinate lyase yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 27.797 22.886 2 0.0030344 30219 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.645 56.54 37729000 3477100 34252000 0 0 0 0 0 0 0 0 0 0 0 0 0 42557 1285 38077 354618;354619 280586;280587 280586 1888 2 QQIGSSAMPYK Unmodified 1208.586 0.58595803 1285 P30566 ADSL Adenylosuccinate lyase yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 39.322 39.82 2 0.019504 43102 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.534 43.757 27306000 0 0 0 0 0 0 0 0 0 0 6056900 0 0 4844700 16405000 42558 1285 38077 354620;354621;354622 280588 280588 0 QQILAAISELNAGK Unmodified 1454.8093 0.80929269 2857 Q68DC2 ANKS6 Ankyrin repeat and SAM domain-containing protein 6 yes yes 0 0 0 By MS/MS 10 0 1 1 82.675 82.859 2 0.031002 95457 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 31.597 15.343 3875700 0 0 0 0 0 0 0 0 3875700 0 0 0 0 0 0 42559 2857 38078 354623 280589 280589 1 QQILLSFK Unmodified 975.57532 0.57531699 1643 P50995 ANXA11 Annexin A11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 73.162 73.39 2 0.021457 83890 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.962 31.777 34352000 0 0 0 0 0 0 0 0 0 0 0 9262900 5221800 7892000 11976000 42560 1643 38079 354624;354625;354626;354627 280590;280591 280590 2 QQILQEMR Unmodified 1044.5386 0.53861391 3573 Q8WWI1 LMO7 LIM domain only protein 7 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 43.536 43.755 2 0.018722 47790 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.207 41.278 57924000 0 0 0 0 7790300 0 4956600 7087300 0 0 7630900 0 9294700 9220700 11944000 42561 3573 38080 354628;354629;354630;354631;354632;354633;354634 280592;280593 280593 2 QQILQEMRK Unmodified 1172.6336 0.63357693 3573 Q8WWI1 LMO7 LIM domain only protein 7 yes yes 0 0 1 By MS/MS By matching By MS/MS 10 0 3 1 1 1 33.672 33.751 3 0.029624 35985 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 29.743 14.6 30449000 0 0 0 9187300 0 0 0 0 0 0 0 0 11339000 9922200 0 42562 3573 38081 354635;354636;354637 280594 280594 1 QQIQNDLNQWK Unmodified 1413.7001 0.70007659 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 55.708 55.378 2 1.1281E-22 71012 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 187 152.19 543410000 0 41493000 0 78720000 28774000 24840000 30241000 118690000 20949000 27636000 36572000 58763000 34881000 17205000 24643000 42563 1029 38082 354638;354639;354640;354641;354642;354643;354644;354645;354646;354647;354648;354649;354650 280595;280596;280597;280598;280599;280600;280601;280602;280603;280604;280605;280606;280607;280608;280609 280598 15 QQIQSIQQSIER Unmodified 1456.7634 0.76340513 1770 P55769 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 51.223 50.591 2 0.00080155 57062 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 74.306 47.192 374160000 0 16250000 0 0 15356000 24798000 29641000 19251000 22303000 45474000 41891000 47027000 32298000 35196000 44675000 42564 1770 38083 354651;354652;354653;354654;354655;354656;354657;354658;354659;354660;354661;354662;354663 280610;280611;280612;280613;280614;280615;280616;280617;280618 280614 9 QQISLATQMVR Oxidation (M) 1289.6762 0.67617003 1548 P48643 CCT5 T-complex protein 1 subunit epsilon yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.399 45.568 2 0.00020571 51466 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 101.9 65.501 338630000 0 0 0 14735000 13629000 32290000 26417000 15120000 15978000 40635000 41774000 44668000 30122000 21977000 41286000 42565 1548 38084 354664;354665;354666;354667;354668;354669;354670;354671;354672;354673;354674;354675 280619;280620;280621;280622;280623;280624;280625;280626;280627;280628;280629;280630;280631 280619 2467 10 QQISLATQMVR Unmodified 1273.6813 0.6812554 1548 P48643 CCT5 T-complex protein 1 subunit epsilon yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.307 62.388 2 5.8715E-16 71296 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 162.88 134.67 331030000 0 0 0 15878000 14124000 42997000 26807000 21171000 0 33551000 43572000 35325000 18033000 0 79574000 42566 1548 38084 354676;354677;354678;354679;354680;354681;354682;354683;354684;354685;354686;354687 280632;280633;280634;280635;280636;280637;280638;280639;280640;280641;280642 280633 8 QQKPTLSGQR Unmodified 1141.6204 0.62036971 3043 Q7L1Q6 BZW1 Basic leucine zipper and W2 domain-containing protein 1 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 9.5421 9.6556 3 0.0048641 8299 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 50.452 38.533 471160000 0 0 0 45926000 41046000 16614000 69468000 31598000 16622000 38596000 0 95708000 36029000 31650000 47902000 42567 3043 38085 354688;354689;354690;354691;354692;354693;354694;354695;354696;354697;354698 280643;280644;280645;280646;280647;280648;280649;280650 280648 3 QQLAEEEARRPR Unmodified 1481.7699 0.76988749 2646 Q27J81 INF2 Inverted formin-2 yes yes 0 0 2 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 16.217 16.375 3 0.0010306 15660 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 87.184 76.574 105170000 0 0 0 5422400 4651800 6279500 7103100 7987800 5480300 8056200 12737000 28804000 0 0 18649000 42568 2646 38086 354699;354700;354701;354702;354703;354704;354705;354706;354707;354708 280651;280652;280653;280654 280654 3 QQLAGEAEISHLALQDPASDK Unmodified 2220.1022 0.10223983 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 75.734 75.484 3 4.5078E-07 93641 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.914 42.791 69985000 0 21902000 0 0 0 7531000 0 4549500 5356400 5267300 5613300 10904000 2859000 6002300 0 42569 645 38087 354709;354710;354711;354712;354713;354714;354715;354716;354717;354718 280655;280656;280657;280658;280659;280660;280661;280662 280656 8 QQLAQYQQQQSQASAPSTSR Unmodified 2234.0676 0.067585653 2470 Q15007 WTAP Pre-mRNA-splicing regulator WTAP yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 34.671 34.642 3 4.4546E-53 38330 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 88.264 85.367 56907000 0 0 0 6941400 7676500 14769000 8141000 0 0 0 0 0 9649400 9729600 0 42570 2470 38088 354719;354720;354721;354722;354723;354724 280663;280664;280665;280666;280667;280668 280666 6 QQLDLTEQQGRK Unmodified 1442.7478 0.74775506 2155 Q08378 GOLGA3 Golgin subfamily A member 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 26.405 26.681 3 0.00051698 28446 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 66.498 48.689 37829000 0 0 0 0 0 8806800 0 8299800 4692900 0 0 0 4939900 4438200 6651500 42571 2155 38089 354725;354726;354727;354728;354729;354730 280669;280670;280671;280672;280673;280674 280674 6 QQLEALLNK Unmodified 1055.5975 0.597509 4105 Q9BRA0 NAA38 N-alpha-acetyltransferase 38, NatC auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 58.089 58.098 2 0.0033609 65358 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 90.308 58.374 228940000 0 0 0 6978400 12098000 11702000 5555000 0 0 54298000 64349000 73964000 0 0 0 42572 4105 38090 354731;354732;354733;354734;354735;354736;354737 280675;280676;280677;280678;280679;280680;280681;280682;280683 280679 9 QQLEAVNEAIK Unmodified 1241.6616 0.66156582 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 47.55 47.694 2 0.00034474 53108 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 88.496 42.815 287730000 0 0 0 17367000 19166000 30658000 0 19659000 0 37546000 0 49083000 29509000 25048000 59696000 42573 643 38091 354738;354739;354740;354741;354742;354743;354744;354745;354746;354747;354748 280684;280685;280686;280687;280688;280689;280690;280691;280692;280693;280694 280692 11 QQLEELAR Unmodified 985.51926 0.51925868 1547 P48637 GSS Glutathione synthetase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 35.009 35.334 2 0.016434 38021 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.277 6.7998 145600000 0 0 0 21517000 0 0 0 30952000 0 0 11463000 40957000 0 10913000 29799000 42574 1547 38092 354749;354750;354751;354752;354753;354754 280695;280696 280695 2 QQLELLEEDK Unmodified 1243.6296 0.62959699 6 A0MZ66 KIAA1598 Shootin-1 yes yes 0 0 0 By MS/MS 2 0 1 1 64.598 58.68 2 0.00065942 75092 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.71 74.266 36925000 0 36925000 0 0 0 0 0 0 0 0 0 0 0 0 0 42575 6 38093 354755 280697;280698 280697 2 QQLELLEEDKK Unmodified 1371.7246 0.72456001 6 A0MZ66 KIAA1598 Shootin-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.22 2.2 1 8 1 1 1 1 1 1 1 1 1 48.15 47.768 3 0.0035063 52398 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.081 30.456 64071000 0 16713000 0 4348800 3379900 0 0 3372600 2439500 0 7826600 8100200 6341800 0 11549000 42576 6 38094 354756;354757;354758;354759;354760;354761;354762;354763;354764 280699;280700;280701;280702 280699 4 QQLERQNK Unmodified 1042.552 0.55195579 1356;1357;1366 P35579;P35580;P35749 MYH9;MYH10;MYH11 Myosin-9;Myosin-10;Myosin-11 no no 0 0 1 By MS/MS 2 0 1 1 5.517 2.1395 2 0.047559 4872 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 114.78 62.996 40694000 40694000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42577 1356;1357;1366 38095 354765 280703 280703 0 QQLFQELK Unmodified 1032.5604 0.56039521 4556 Q9NPQ8 RIC8A Synembryn-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.993 59.106 2 0.030197 67943 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 55.676 29.849 155780000 0 0 0 10740000 9182600 14075000 13425000 10516000 8869800 15221000 15991000 14597000 12391000 11524000 19247000 42578 4556 38096 354766;354767;354768;354769;354770;354771;354772;354773;354774;354775;354776;354777 280704;280705;280706;280707;280708 280708 4 QQLGTAVELEMAK Unmodified 1416.7283 0.72826518 4746 Q9NYL9 TMOD3 Tropomodulin-3 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.515 68.593 2 0.00045402 78815 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 79.659 69.136 70256000 0 0 0 1182700 4966900 6895900 3531500 4487400 4464400 5957600 9496500 9861000 4612500 6033600 8765800 42579 4746 38097 354778;354779;354780;354781;354782;354783;354784;354785;354786;354787;354788;354789 280709;280710;280711;280712;280713;280714;280715;280716;280717;280718;280719;280720;280721;280722 280715 14 QQLHTMAQK Unmodified 1083.5495 0.54951295 4325 Q9H0E3 SAP130 Histone deacetylase complex subunit SAP130 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 12.656 9.5258 2 0.029348 12089 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 67.169 44.547 13980000 11048000 0 2932100 0 0 0 0 0 0 0 0 0 0 0 0 42580 4325 38098 354790;354791 280723;280724 280724 1 QQLILAR Unmodified 840.51814 0.51813647 1544 P48556 PSMD8 26S proteasome non-ATPase regulatory subunit 8 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 42.5 42.626 2 0.027168 47509 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 77.748 26.783 309830000 0 0 0 28437000 26142000 35496000 15321000 16105000 9345400 41701000 47268000 60616000 16653000 12745000 0 42581 1544 38099 354792;354793;354794;354795;354796;354797;354798;354799;354800;354801;354802 280725;280726;280727 280726 3 QQLLEEERTR Unmodified 1300.6735 0.67352749 4628 Q9NSI2 FAM207A Protein FAM207A yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 25.501 25.855 3 0.016181 27761 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 38.402 24.145 95830000 0 0 0 13268000 0 0 0 0 0 17863000 11648000 28142000 0 9926900 14982000 42582 4628 38100 354803;354804;354805;354806;354807;354808 280728;280729 280729 2 QQLLEQQQPQK Unmodified 1366.7205 0.72047768 5050 Q9UPN6 SCAF8 Protein SCAF8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.627 28.821 2 3.4376E-06 30600 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 171.73 154.27 377340000 0 0 0 22274000 23780000 19178000 25806000 25159000 21727000 33283000 45397000 47961000 35527000 29870000 47372000 42583 5050 38101 354809;354810;354811;354812;354813;354814;354815;354816;354817;354818;354819;354820 280730;280731;280732;280733;280734;280735;280736;280737;280738;280739;280740;280741;280742 280734 13 QQLLIGAYAK Unmodified 1103.6339 0.63389451 4065 Q99832 CCT7 T-complex protein 1 subunit eta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 64.091 62.754 2 0.0013167 71316 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 107.66 81.725 3193000000 504600000 774880000 12266000 112900000 99831000 167010000 138410000 147890000 84652000 180930000 200180000 241390000 159630000 149030000 219340000 42584 4065 38102 354821;354822;354823;354824;354825;354826;354827;354828;354829;354830;354831;354832;354833;354834;354835;354836 280743;280744;280745;280746;280747;280748;280749;280750;280751;280752;280753;280754;280755;280756;280757;280758;280759;280760;280761;280762;280763;280764;280765 280756 23 QQLLTLR Unmodified 870.5287 0.52870115 2557 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 53.305 53.446 2 0.017052 59155 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 114.72 43.808 839860000 0 0 0 50668000 49259000 88630000 68652000 61103000 35050000 96985000 73551000 92803000 60799000 68411000 93949000 42585 2557 38103 354837;354838;354839;354840;354841;354842;354843;354844;354845;354846;354847;354848 280766;280767;280768;280769;280770;280771 280768 6 QQLLVSLK Unmodified 927.57532 0.57531699 4947 Q9UJX6 ANAPC2 Anaphase-promoting complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.19 62.289 2 0.027721 71140 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 57.177 35.877 73166000 0 0 0 3975800 3616600 5003200 4801000 5635600 3357800 6764700 8091000 9025700 6530600 6766000 9598000 42586 4947 38104 354849;354850;354851;354852;354853;354854;354855;354856;354857;354858;354859;354860 280772;280773 280772 2 QQLMQMEREK Unmodified 1319.6326 0.63259065 3495 Q8TD16 BICD2 Protein bicaudal D homolog 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 34.841 29.991 3 0.026188 41984 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.802 15.831 7368900 5777300 0 1591600 0 0 0 0 0 0 0 0 0 0 0 0 42587 3495 38105 354861;354862 280774 280774 1 QQLPEQPFEK Unmodified 1242.6245 0.62445203 1497 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes yes 0 0 0 By MS/MS 2 0 1 1 54.383 48.577 2 0.0075648 62850 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.311 73.783 43286000 0 43286000 0 0 0 0 0 0 0 0 0 0 0 0 0 42588 1497 38106 354863 280775 280775 0 QQLPTFLQQMQNPDTLSAMSNPR 2 Oxidation (M) 2676.2636 0.26358462 5018 Q9UMX0 UBQLN1 Ubiquilin-1 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.48 78.538 3 3.0272E-21 90593 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 89.47 86.314 454590000 0 0 0 16481000 26729000 39863000 26599000 49884000 21654000 59745000 42148000 49055000 33536000 36305000 52596000 42589 5018 38107 354864;354865;354866;354867;354868;354869;354870;354871;354872;354873;354874;354875 280776;280777;280778;280779;280780;280781;280782;280783;280784;280785;280786;280787;280788 280776 6360;6361 13 QQLPTFLQQMQNPDTLSAMSNPR Oxidation (M) 2660.2687 0.26867 5018 Q9UMX0 UBQLN1 Ubiquilin-1 yes yes 0 1 0 By MS/MS 10 0 1 1 82.959 83.15 3 5.4651E-05 95970 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.533 36.436 17734000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17734000 42590 5018 38107 354876 280789 280789 6360;6361 1 QQLPTFLQQMQNPDTLSAMSNPR Unmodified 2644.2738 0.27375538 5018 Q9UMX0 UBQLN1 Ubiquilin-1 yes yes 0 0 0 By MS/MS 10 0 1 1 90.321 90.46 3 0.00066465 104700 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 34.658 31.196 2834700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2834700 42591 5018 38107 354877 280790 280790 1 QQLQLMAQDAFR Unmodified 1447.7242 0.72418285 4872 Q9UER7 DAXX Death domain-associated protein 6 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching 10 0 7 1 1 1 1 1 1 1 76.396 76.441 2 0.0037911 88725 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 59.426 49.421 26555000 0 0 0 1838900 0 5310400 0 4654200 0 0 3378300 0 3763200 0 7609700 42592 4872 38108 354878;354879;354880;354881;354882;354883;354884 280791;280792;280793;280794 280794 4 QQLQLMAQDAFR Oxidation (M) 1463.7191 0.71909747 4872 Q9UER7 DAXX Death domain-associated protein 6 yes yes 0 1 0 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 64.717 64.891 2 0.0041844 74725 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 51.445 29.982 14404000 0 0 0 0 0 2203200 0 0 0 3576700 0 2029400 6595000 0 0 42593 4872 38108 354885;354886;354887;354888 280795 280795 6222 1 QQLQQAEEALVAK Unmodified 1454.7729 0.77290718 5288 Q9Y6K9 IKBKG NF-kappa-B essential modulator yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 60.106 59.524 2 6.9218E-08 67119 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 99.34 77.968 99221000 0 54930000 0 0 0 4345300 5571400 0 0 0 7763100 8504500 4992800 0 13114000 42594 5288 38109 354889;354890;354891;354892;354893;354894;354895;354896;354897 280796;280797;280798;280799;280800;280801;280802;280803;280804 280800 6 QQLQTTR Unmodified 873.46683 0.46682918 5017 Q9UMS4 PRPF19 Pre-mRNA-processing factor 19 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.5249 7.6528 2 0.035807 5699 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 70.67 35.051 72474000 0 0 0 5310000 4632300 7437900 6359900 8392800 5308300 4822600 9134900 5797900 5854900 3502500 5920000 42595 5017 38110 354898;354899;354900;354901;354902;354903;354904;354905;354906;354907;354908;354909 280805 280805 1 QQLSAATSR Unmodified 960.49886 0.49885759 2698 Q53EZ4 CEP55 Centrosomal protein of 55 kDa yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.582 12.737 2 0.0084462 12038 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 69.598 35.802 34845000 0 0 0 2030600 2089400 2952100 2852100 2655500 2271900 3476800 3547500 3993100 3847300 2107800 3020800 42596 2698 38111 354910;354911;354912;354913;354914;354915;354916;354917;354918;354919;354920;354921 280806;280807;280808;280809;280810;280811 280809 6 QQLSAATSRIAELESK Unmodified 1730.9163 0.91627696 2698 Q53EZ4 CEP55 Centrosomal protein of 55 kDa yes yes 0 0 1 By MS/MS 2 0 1 1 70.731 62.464 3 0.0087544 83180 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.024 24.191 24241000 24241000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42597 2698 38112 354922 280812 280812 1 QQLSAEELDAQLDAYNAR Unmodified 2033.9654 0.96541199 3162 Q86V81 ALYREF THO complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 1 2 2 2 2 2 2 2 2 2 78.024 78.086 2;3 0 90220 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 265.13 239.11 980670000 0 0 0 27854000 105810000 46096000 72377000 73387000 108420000 108740000 102880000 138950000 53059000 53609000 89479000 42598 3162 38113 354923;354924;354925;354926;354927;354928;354929;354930;354931;354932;354933;354934;354935;354936;354937;354938;354939;354940;354941;354942;354943;354944;354945 280813;280814;280815;280816;280817;280818;280819;280820;280821;280822;280823;280824;280825;280826;280827 280827 15 QQLSAEELDAQLDAYNARMDTS Oxidation (M) 2484.1075 0.10746114 3162 Q86V81 ALYREF THO complex subunit 4 yes yes 0 1 1 By MS/MS 2.5 0.5 1 1 2 81.096 77.078 3 0.00039395 92636 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 58.835 55.62 64287000 0 64287000 0 0 0 0 0 0 0 0 0 0 0 0 0 42599 3162 38114 354946;354947 280828;280829 280829 4781 2 QQLSAEELDAQLDAYNARMDTS Unmodified 2468.1125 0.11254651 3162 Q86V81 ALYREF THO complex subunit 4 yes yes 0 0 1 By MS/MS 2.33 0.471 2 1 3 85.221 80.96 2;3 1.1342E-240 100533 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 247.17 237.18 218250000 0 218250000 0 0 0 0 0 0 0 0 0 0 0 0 0 42600 3162 38114 354948;354949;354950 280830;280831;280832 280831 3 QQLSLYMDK Unmodified 1124.5536 0.55359527 4652 Q9NUQ3 TXLNG Gamma-taxilin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 54.808 55.232 2 0.0353 62378 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 46.158 25.533 38408000 0 0 0 0 0 0 0 0 0 0 8624000 7090100 6715100 5845600 10133000 42601 4652 38115 354951;354952;354953;354954;354955 280833 280833 1 QQLSPDRQPQSSGPDR Unmodified 1794.8609 0.86088734 4350 Q9H1H9 KIF13A Kinesin-like protein KIF13A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 19.748 19.955 3 0.00071302 20421 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 61.097 56.629 47782000 0 0 0 3289900 2239900 4860200 4131600 0 2474900 4632900 5868900 4831400 4757700 4120400 6573700 42602 4350 38116 354956;354957;354958;354959;354960;354961;354962;354963;354964;354965;354966 280834;280835;280836;280837;280838;280839;280840 280835 7 QQLVASHLEK Unmodified 1151.6299 0.62987176 2317 Q13561 DCTN2 Dynactin subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.57 3.06 5 23 2 1 2 1 2 2 2 2 2 2 2 2 2 2 2 28.952 28.267 2;3 5.8997E-05 37286 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 152.34 81.428 1605700000 882950000 168170000 194440000 11778000 19945000 38162000 28860000 17937000 16350000 36442000 35734000 38262000 25632000 34401000 56668000 42603 2317 38117 354967;354968;354969;354970;354971;354972;354973;354974;354975;354976;354977;354978;354979;354980;354981;354982;354983;354984;354985;354986;354987;354988;354989;354990;354991;354992;354993;354994 280841;280842;280843;280844;280845;280846;280847;280848 280846 5 QQMAREYREK Oxidation (M) 1353.6459 0.64593253 1940 P63104 YWHAZ 14-3-3 protein zeta/delta yes yes 0 1 2 By MS/MS 2.5 0.5 1 1 2 6.3424 2.8139 2;3 0.023059 3402 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 57.348 34.771 610870000 610870000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42604 1940 38118 354995;354996 280849;280850 280849 1 QQMAREYREK Unmodified 1337.651 0.65101791 1940 P63104 YWHAZ 14-3-3 protein zeta/delta yes yes 0 0 2 By MS/MS By matching By MS/MS 2 0 3 1 1 1 10.207 7.083 3 0.022649 11465 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.017 60.813 1508200000 1499900000 6805300 1485700 0 0 0 0 0 0 0 0 0 0 0 0 42605 1940 38118 354997;354998;354999 280851 280851 1 QQMEEQVAQK Oxidation (M) 1233.566 0.56595087 4890 Q9UH65 SWAP70 Switch-associated protein 70 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 7.4588 7.5652 2 0.0050367 5043 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.962 40.662 21285000 0 0 0 1231700 730080 1851800 2542900 0 1664200 2697700 0 3499200 1850400 2515000 2702200 42606 4890 38119 355000;355001;355002;355003;355004;355005;355006;355007;355008;355009 280852;280853;280854;280855 280853 6245 4 QQMEEQVAQK Unmodified 1217.571 0.57103625 4890 Q9UH65 SWAP70 Switch-associated protein 70 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 15.727 16.24 2 0.0074048 15064 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.546 43.443 15681000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15681000 42607 4890 38119 355010;355011 280856;280857 280856 2 QQMENYPK Unmodified 1036.4648 0.46478027 876 P08962 CD63 CD63 antigen yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.058 18.246 2 0.025168 17970 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 58.917 38.292 98104000 0 0 0 5264700 8494700 5819300 6633500 7220600 5384400 9572500 8160300 11998000 7467400 9242900 12846000 42608 876 38120 355012;355013;355014;355015;355016;355017;355018;355019;355020;355021;355022;355023 280858;280859;280860 280860 3 QQMENYPK Oxidation (M) 1052.4597 0.45969489 876 P08962 CD63 CD63 antigen yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 9.8988 10.01 2 0.033858 8714 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 46.426 36.439 33881000 0 0 0 2791700 3321200 2190700 2989200 2833900 2251700 2801100 0 6091400 3361500 2639900 2608900 42609 876 38120 355024;355025;355026;355027;355028;355029;355030;355031;355032;355033;355034 280861 280861 1 QQMFENK Unmodified 923.4171 0.41710179 4365 Q9H2G2 SLK STE20-like serine/threonine-protein kinase yes yes 0 0 0 By MS/MS 2 0 1 1 20.374 16.661 2 0.045032 21910 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.616 35.549 55576000 0 55576000 0 0 0 0 0 0 0 0 0 0 0 0 0 42610 4365 38121 355035 280862 280862 1 QQMLENQMEVR Unmodified 1404.649 0.648969 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 47.236 47.683 2 0.025856 52673 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.496 32.851 15083000 0 0 0 0 0 0 0 0 0 5280100 0 0 0 0 9803000 42611 2047 38122 355036;355037;355038 280863;280864 280863 2 QQMLENQMEVRK Unmodified 1532.7439 0.74393201 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS 2 0 1 1 41.038 37.428 3 0.030623 47216 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 36.417 29.378 2341600 0 0 2341600 0 0 0 0 0 0 0 0 0 0 0 0 42612 2047 38123 355039 280865 280865 1 QQMLEQHLQDVRK Unmodified 1651.8464 0.84642325 1419 P40763 STAT3 Signal transducer and activator of transcription 3 yes yes 0 0 1 By MS/MS 2 0 1 1 48.673 40.847 3 0.00020165 56679 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.34 70.174 12913000 12913000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42613 1419 38124 355040 280866;280867 280867 2 QQMLEQHLQDVRK Oxidation (M) 1667.8413 0.84133787 1419 P40763 STAT3 Signal transducer and activator of transcription 3 yes yes 0 1 1 By MS/MS 2 0 1 1 38.73 32.169 3 0.0020737 44764 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.042 52.992 18318000 18318000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42614 1419 38124 355041 280868 280868 2230 0 QQMQDFFLAHK Unmodified 1391.6656 0.66560534 4230 Q9BXP5 SRRT Serrate RNA effector molecule homolog yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 67.442 67.588 3 0.02654 77469 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 27.428 11.174 58542000 0 0 0 0 1524700 8371300 0 4010000 4239600 7101700 7212900 8792500 4298800 0 12990000 42615 4230 38125 355042;355043;355044;355045;355046;355047;355048;355049;355050 280869;280870;280871 280871 2 QQNEGDSIISK Unmodified 1217.5888 0.58879481 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.354 24.557 2 0.0039369 25944 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 77.192 52.269 270030000 0 0 0 19924000 20079000 16077000 23773000 21180000 17608000 22822000 21450000 27322000 31746000 18021000 30026000 42616 2556 38126 355051;355052;355053;355054;355055;355056;355057;355058;355059;355060;355061;355062 280872;280873;280874;280875;280876;280877;280878;280879;280880;280881;280882 280876 11 QQNELAELHANLAR Unmodified 1605.8223 0.82231699 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 60.911 60.992 3 0.0023533 69935 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 47.532 40.803 80951000 0 0 0 4041800 4310800 7271700 6886000 8370600 4951000 7767500 0 9957300 7850800 8019700 11524000 42617 2459 38127 355063;355064;355065;355066;355067;355068;355069;355070;355071;355072;355073 280883;280884;280885;280886;280887;280888;280889;280890;280891;280892;280893;280894 280892 12 QQNFNTGIK Unmodified 1048.5302 0.53015772 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.24 2 1 10 2 1 1 1 1 1 1 1 1 1 1 1 28.665 27.883 2 0.0043294 30184 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 87.181 53.178 360220000 0 236040000 1204700 6298800 6934700 14043000 6678100 6656100 0 14096000 15472000 16709000 11293000 0 24799000 42618 2344 38128 355074;355075;355076;355077;355078;355079;355080;355081;355082;355083;355084;355085;355086 280895;280896;280897;280898;280899;280900;280901;280902;280903;280904;280905;280906 280896 8 QQNPRLVYVCDPVLGDK Unmodified 2000.0149 0.014945143 181 O00764 PDXK Pyridoxal kinase yes yes 0 0 1 By MS/MS 2 0 1 1 78.567 70.436 3 0.00038804 92479 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.231 59.115 136510000 136510000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42619 181 38129 355087 280907 280907 1 QQNQEITDQLEEEK Unmodified 1730.7959 0.79588705 2156 Q08379 GOLGA2 Golgin subfamily A member 2 yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 46.024 46.277 2 1.204E-19 51562 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 137.89 119.15 42888000 0 0 0 0 2482300 6441300 2850700 0 0 5506700 7048500 6701200 5517400 0 6340000 42620 2156 38130 355088;355089;355090;355091;355092;355093;355094;355095 280908;280909;280910;280911 280911 4 QQNQELQEQLR Unmodified 1412.7008 0.70080487 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.379 34.562 2 0.00055188 36971 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 81.525 63.3 141410000 0 0 0 7306200 7284100 14523000 9798000 7508200 8516500 12637000 23050000 13282000 11306000 9806300 16396000 42621 2459 38131 355096;355097;355098;355099;355100;355101;355102;355103;355104;355105;355106;355107 280912;280913;280914 280913 1 QQNVQSASQDEK Unmodified 1360.6219 0.62188585 2652 Q2M389 KIAA1033 WASH complex subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 6.9768 7.0941 2 0.001482 5030 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 83.869 65.644 35357000 0 0 0 2695100 1468300 3924200 2363800 2659800 2927300 4200400 5280800 2337900 0 3753400 3745700 42622 2652 38132 355108;355109;355110;355111;355112;355113;355114;355115;355116;355117;355118 280915;280916;280917;280918;280919 280915 5 QQPDTEAVLNGK Unmodified 1298.6466 0.64664404 1731 P54105 CLNS1A Methylosome subunit pICln yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.438 37.618 2 0.00051035 40967 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 78.556 63.883 185830000 0 0 0 10175000 10263000 10405000 11179000 11306000 7708600 12318000 25440000 21423000 19337000 16762000 29510000 42623 1731 38133 355119;355120;355121;355122;355123;355124;355125;355126;355127;355128;355129;355130 280920;280921;280922;280923;280924;280925;280926;280927;280928;280929 280928 10 QQPEVEVTHETLQR Unmodified 1692.8431 0.84311201 399 O60437 PPL Periplakin yes yes 0 0 0 By MS/MS By matching By matching By matching By matching 10 0 5 1 1 1 1 1 42.037 42.275 3 0.014237 47945 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 43.69 32.635 23881000 0 0 0 7263000 0 0 0 0 0 4612300 3381900 4773800 3849900 0 0 42624 399 38134 355131;355132;355133;355134;355135 280930 280930 1 QQPFAYGTLTVR Unmodified 1379.7197 0.7197494 4666 Q9NVE7 PANK4 Pantothenate kinase 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 72.501 72.4 2 0.0016435 83567 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.19 61.891 321440000 0 0 0 44705000 119250000 122050000 0 26143000 0 0 0 9287300 0 0 0 42625 4666 38135 355136;355137;355138;355139;355140 280931;280932;280933;280934;280935;280936;280937;280938 280932 8 QQPFQNLLK Unmodified 1114.6135 0.61349341 4490 Q9HAU5 UPF2 Regulator of nonsense transcripts 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 70.403 70.701 2 0.02017 80583 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.351 38.576 20761000 0 0 0 0 0 0 0 0 0 8316600 0 6012600 0 0 6432000 42626 4490 38136 355141;355142;355143 280939 280939 1 QQPLFVSGGDDYK Unmodified 1452.6885 0.68850885 1721 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58.295 57.386 2 4.0294E-10 72790 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 143.24 132.09 1020200000 14147000 589950000 0 26463000 23826000 40653000 27411000 31732000 37762000 39940000 36935000 41146000 35756000 29254000 45260000 42627 1721 38137 355144;355145;355146;355147;355148;355149;355150;355151;355152;355153;355154;355155;355156;355157 280940;280941;280942;280943;280944;280945;280946;280947;280948;280949;280950;280951 280940 12 QQPNPGNELCYK Unmodified 1446.6562 0.65616287 2384 Q14166 TTLL12 Tubulin--tyrosine ligase-like protein 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 40.512 40.187 2 0.0013415 45032 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.19 53.098 127780000 0 45981000 0 4242200 3770500 11673000 4302400 0 3651400 10479000 10528000 10000000 0 8421100 14733000 42628 2384 38138 355158;355159;355160;355161;355162;355163;355164;355165;355166;355167;355168 280952;280953;280954;280955;280956;280957;280958;280959;280960;280961;280962 280952 11 QQPPAVQFVPPLPEWK Unmodified 1859.9934 0.99340506 397 O60341 KDM1A Lysine-specific histone demethylase 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 2 18 2 2 2 1 2 2 1 2 2 1 1 2 91.921 91.533 2;3 0.00040226 113557 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109 95.335 122370000 0 66866000 0 0 3424100 4821400 1246200 5798600 3629200 5571000 6217100 5759300 1212900 1937600 15883000 42629 397 38139 355169;355170;355171;355172;355173;355174;355175;355176;355177;355178;355179;355180;355181;355182;355183;355184;355185;355186;355187;355188 280963;280964;280965;280966;280967;280968;280969;280970;280971 280967 9 QQPPEPEWIGDGESTSPSDK Unmodified 2182.9655 0.96547157 3421 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 63.129 63.316 2 1.5333E-20 72388 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 102.52 97.036 59562000 0 0 0 0 3923600 0 5933700 8434200 0 7414600 7611800 9029500 5094700 4184900 7934800 42630 3421 38140 355189;355190;355191;355192;355193;355194;355195;355196;355197;355198 280972;280973;280974;280975;280976;280977;280978;280979;280980;280981 280976 10 QQPPNSFSQQHSETQGAEKPDPESSHSPPR Unmodified 3313.4984 0.49842325 475 O75208 COQ9 Ubiquinone biosynthesis protein COQ9, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 30.829 30.948 5 2.2474E-08 33900 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 37.054 35.049 96949000 0 0 0 6640800 8090900 15773000 6662500 0 11119000 11312000 13449000 0 14202000 0 9699700 42631 475 38141 355199;355200;355201;355202;355203;355204;355205;355206;355207 280982;280983;280984;280985;280986;280987;280988 280982 7 QQQAATSESSQSEASVR Unmodified 1792.8187 0.81874776 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.324 15.495 2 3.5549E-96 14307 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 190.1 166.25 57375000 0 0 0 2322200 1336700 2811600 3485600 1923800 1897800 3630300 7128600 8369100 5900300 5611400 12958000 42632 3119 38142 355208;355209;355210;355211;355212;355213;355214;355215;355216;355217;355218;355219 280989;280990;280991;280992;280993;280994;280995;280996;280997;280998;280999;281000 280992 12 QQQAATSESSQSEASVRR Unmodified 1948.9199 0.91985878 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 1 By matching By matching By matching By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 13.088 13.29 3 0.0016487 12416 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 33.697 23.533 8171200 0 0 0 0 0 1177900 696990 0 648790 0 1995900 2069100 1582600 0 0 42633 3119 38143 355220;355221;355222;355223;355224;355225 281001 281001 1 QQQASDVHELQQK Unmodified 1537.7485 0.74848335 3242 Q8IWJ2 GCC2 GRIP and coiled-coil domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 18.236 17.661 3 0.0073164 23030 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 49.333 43.438 71728000 0 37589000 0 0 2873300 4274700 6177000 3017400 0 0 2478000 6767400 0 3296200 5255100 42634 3242 38144 355226;355227;355228;355229;355230;355231;355232;355233;355234;355235 281002;281003;281004;281005;281006 281003 5 QQQDEAYLASLRADQEK Unmodified 1991.9548 0.95484731 3783 Q96CS3 FAF2 FAS-associated factor 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching 10 0 5 1 1 1 1 1 56.323 56.336 3 0.0020196 63983 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 33.697 30.671 28497000 0 0 0 0 4059700 0 4959300 5449900 5665600 8362800 0 0 0 0 0 42635 3783 38145 355236;355237;355238;355239;355240 281007;281008;281009 281008 2 QQQDQVDRNIK Unmodified 1370.6902 0.69024019 2508 Q15233 NONO Non-POU domain-containing octamer-binding protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 13.256 12.462 3 0.0013337 11829 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 63.32 51.401 745170000 84257000 454820000 15635000 9353700 11083000 14478000 24359000 12995000 11621000 23647000 0 23898000 13459000 17411000 28147000 42636 2508 38146 355241;355242;355243;355244;355245;355246;355247;355248;355249;355250;355251;355252;355253;355254;355255 281010;281011;281012;281013;281014;281015;281016;281017;281018 281010 2 QQQDYFHSILGPGNIK Unmodified 1843.9217 0.92169668 1420 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 81.495 76.143 3 0.00061062 97914 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.474 50.944 57876000 53521000 0 4355300 0 0 0 0 0 0 0 0 0 0 0 0 42637 1420 38147 355256;355257 281019;281020 281019 2 QQQEEDEQETAALLEEARK Unmodified 2244.0506 0.050598185 4205 Q9BW85 CCDC94 Coiled-coil domain-containing protein 94 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.754 65.84 3 2.0352E-08 76003 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 78.234 68.951 102490000 0 0 0 6188300 5878800 8622700 7885000 7983100 4691800 9271800 8771100 11528000 8072800 10268000 13332000 42638 4205 38148 355258;355259;355260;355261;355262;355263;355264;355265;355266;355267;355268;355269 281021;281022;281023;281024;281025;281026;281027;281028;281029;281030;281031;281032;281033 281032 13 QQQEELEAEHGTGDKPAAPR Unmodified 2190.0301 0.030137515 2354 Q13895 BYSL Bystin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 1 2 2 1 2 2 2 25.968 26.149 3;4 4.2978E-07 27400 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 67.274 58.78 230810000 0 0 0 15243000 16194000 13934000 16129000 13886000 1635000 23359000 29081000 23478000 29504000 20961000 27403000 42639 2354 38149 355270;355271;355272;355273;355274;355275;355276;355277;355278;355279;355280;355281;355282;355283;355284;355285;355286;355287;355288;355289;355290;355291 281034;281035;281036;281037;281038;281039;281040;281041;281042;281043;281044;281045;281046;281047;281048;281049;281050 281047 15 QQQEILAAK Unmodified 1027.5662 0.56620887 3684 Q92905 COPS5 COP9 signalosome complex subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 27.247 26.486 2 0.0090061 28736 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 67.981 49.198 308440000 217190 144240000 0 6831300 7945500 18104000 11531000 10654000 7472400 17068000 18244000 15600000 12656000 14507000 23374000 42640 3684 38150 355292;355293;355294;355295;355296;355297;355298;355299;355300;355301;355302;355303;355304;355305;355306;355307 281051;281052;281053;281054;281055;281056;281057;281058;281059;281060;281061;281062;281063 281051 12 QQQELDGSLK Unmodified 1144.5724 0.57241646 4365 Q9H2G2 SLK STE20-like serine/threonine-protein kinase yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 30.356 25.3 2 0.019167 33574 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.305 18.848 27417000 9019300 18398000 0 0 0 0 0 0 0 0 0 0 0 0 0 42641 4365 38151 355308;355309 281064 281064 1 QQQELFAK Unmodified 990.51345 0.51344502 2060 Q01658 DR1 Protein Dr1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.042 31.231 2 0.006821 34618 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 95.352 47.609 164860000 0 0 0 11737000 11475000 13030000 10581000 11077000 7090500 16509000 19315000 23727000 15813000 8522900 15980000 42642 2060 38152 355310;355311;355312;355313;355314;355315;355316;355317;355318;355319;355320;355321 281065;281066;281067;281068 281068 2 QQQEQLLK Unmodified 1013.5506 0.55055881 1546 P48634 PRRC2A Protein PRRC2A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.271 37.45 2 0.04959 41815 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 47.067 4.958 457360000 0 0 0 22549000 22852000 28104000 24798000 27839000 22279000 44487000 70629000 60623000 39038000 27803000 66357000 42643 1546 38153 355322;355323;355324;355325;355326;355327;355328;355329;355330;355331;355332;355333 281069 281069 1 QQQFENLDQQLRK Unmodified 1673.8485 0.84853174 428 O60749 SNX2 Sorting nexin-2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50.875 50.031 3 3.7201E-09 55367 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.31 93.189 315060000 9230400 0 34680000 17621000 15291000 36148000 16199000 18829000 23003000 34459000 31148000 0 20047000 19468000 38935000 42644 428 38154 355334;355335;355336;355337;355338;355339;355340;355341;355342;355343;355344;355345;355346;355347 281070;281071;281072;281073;281074;281075;281076;281077;281078;281079;281080;281081;281082;281083 281074 14 QQQFPGTSM Oxidation (M) 1038.444 0.44404482 139 O00287 RFXAP Regulatory factor X-associated protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 32.453 32.745 2 0.038303 35634 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 40.203 30.124 37222000 0 0 0 0 0 3966300 4524600 0 0 5684300 5556900 9758800 4054800 3676200 0 42645 139 38155 355348;355349;355350;355351;355352;355353;355354 281084 281084 1 QQQILEEQGLGK Unmodified 1369.7201 0.72014333 2778 Q5T5Y3 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 47.275 47.716 2 0.047322 53587 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 46.001 26.686 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42646 2778 38156 355355 281085 281085 1 QQQILLEK Unmodified 998.57605 0.57604528 4215 Q9BWU0 SLC4A1AP Kanadaptin yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By matching By matching 8.86 2.8 1 6 1 1 1 1 1 1 1 40.423 39.675 2 0.014055 50385 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.492 19.645 165640000 0 134120000 0 4639800 3558000 0 5125000 0 0 5857400 6951100 0 0 5390400 0 42647 4215 38157 355356;355357;355358;355359;355360;355361;355362 281086;281087 281087 2 QQQLLNQQVLEQR Unmodified 1623.8693 0.86926718 139 O00287 RFXAP Regulatory factor X-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 2 2 2 1 2 1 2 62.304 62.379 2;3 1.7934E-11 71144 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 141.88 124.44 258300000 0 0 0 16953000 18547000 18774000 23585000 20223000 15923000 24750000 25558000 29935000 18074000 12582000 33399000 42648 139 38158 355363;355364;355365;355366;355367;355368;355369;355370;355371;355372;355373;355374;355375;355376;355377;355378;355379;355380;355381;355382;355383;355384 281088;281089;281090;281091;281092;281093;281094;281095;281096;281097;281098;281099;281100;281101;281102;281103;281104 281096 14 QQQLTAMK Unmodified 946.4906 0.49060109 1356;1366 P35579;P35749 MYH9;MYH11 Myosin-9;Myosin-11 no no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.42 21.624 2 0.030197 22448 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 55.676 27.458 201420000 0 0 0 17598000 17524000 12840000 14480000 11068000 11125000 22101000 22666000 30571000 17594000 12265000 11588000 42649 1356;1366 38159 355385;355386;355387;355388;355389;355390;355391;355392;355393;355394;355395;355396 281105;281106 281105 2 QQQLTAMK Oxidation (M) 962.48552 0.48551571 1356;1366 P35579;P35749 MYH9;MYH11 Myosin-9;Myosin-11 no no 0 1 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 9.4121 9.5197 2 0.0045421 8026 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 91.9 42.31 126610000 0 0 0 14620000 14193000 8256400 16876000 7503400 0 11769000 0 25320000 13349000 7272900 7445900 42650 1356;1366 38159 355397;355398;355399;355400;355401;355402;355403;355404;355405;355406 281107;281108 281107 2093 2 QQQMAALTK Unmodified 1017.5277 0.52771487 28 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 28.922 24.574 2 0.02624 32242 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.812 39.2 48976000 0 48976000 0 0 0 0 0 0 0 0 0 0 0 0 0 42651 28 38160 355407 281109 281109 1 QQQPNPVEQR Unmodified 1222.6054 0.60544792 2302 Q13496 MTM1 Myotubularin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 16.981 17.197 2 0.013776 17725 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.066 35.185 5913700 0 0 0 991560 0 1385300 0 0 0 0 1776100 0 0 0 1760800 42652 2302 38161 355408;355409;355410;355411 281110;281111 281110 2 QQQPPPETFDFK Unmodified 1460.6936 0.69359423 2391 Q14203 DCTN1 Dynactin subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 60.599 60.76 2 0.0042496 69257 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 52.579 41.821 69965000 0 0 0 4623000 0 7988800 5825100 4203800 3449200 5471100 7664200 7454400 6795300 5960100 10530000 42653 2391 38162 355412;355413;355414;355415;355416;355417;355418;355419;355420;355421;355422 281112;281113;281114;281115;281116;281117;281118;281119 281118 8 QQQQLQQQQQRDPEAHIK Unmodified 2230.1203 0.12028993 3330 Q8N4C8 MINK1 Misshapen-like kinase 1 yes yes 0 0 1 By MS/MS 2 0 1 1 26.837 23.781 4 0.0050383 30318 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 42.314 37.057 4065200 0 0 4065200 0 0 0 0 0 0 0 0 0 0 0 0 42654 3330 38163 355423 281120 281120 1 QQQQPQQQK Unmodified 1139.5683 0.56833414 576 O76074 PDE5A cGMP-specific 3',5'-cyclic phosphodiesterase yes yes 0 0 0 By MS/MS By matching By MS/MS 2 0 3 1 1 1 13.443 10.235 2 0.040654 15311 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.912 12.097 245100000 175580000 37064000 32457000 0 0 0 0 0 0 0 0 0 0 0 0 42655 576 38164 355424;355425;355426 281121 281121 1 QQQQQQILR Unmodified 1168.6313 0.63126874 3709 Q93074 MED12 Mediator of RNA polymerase II transcription subunit 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 22.257 22.399 2 0.0089221 23455 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 79.116 51.591 36054000 0 0 0 2571200 2096600 3406500 3553000 2284800 3499000 6466100 0 6040100 0 0 6136800 42656 3709 38165 355427;355428;355429;355430;355431;355432;355433;355434;355435 281122;281123;281124;281125 281123 4 QQQQQQNDVVK Unmodified 1341.6637 0.66369108 2512 Q15286 RAB35 Ras-related protein Rab-35 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 9.023 9.157 2 6.6313E-37 6470 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 181.55 139.9 153230000 0 0 0 9026200 8594700 9676800 11982000 8148300 7760100 9244100 32096000 25158000 10344000 7739500 13458000 42657 2512 38166 355436;355437;355438;355439;355440;355441;355442;355443;355444;355445;355446;355447 281126;281127;281128;281129;281130;281131;281132;281133;281134;281135;281136 281130 10 QQQQQQQHQQPNR Unmodified 1674.7935 0.79347648 2994 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 5.5059 5.6196 3 0.017256 3296 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 35.737 30.935 77469000 0 0 0 136520 14316000 13146000 14086000 0 7501700 6726300 4344300 3579800 3016400 1328100 9287800 42658 2994 38167 355448;355449;355450;355451;355452;355453;355454;355455;355456;355457;355458 281137;281138 281137 2 QQQQQQQQQQQQQQQQQQHVTSWPGK Unmodified 3215.5205 0.5204961 2368 Q14119 VEZF1 Vascular endothelial zinc finger 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 2 1 1 2 2 2 2 1 1 2 1 32.488 32.69 3;4 4.7796E-13 34868 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.278 58.035 110290000 0 0 0 0 8562100 5732800 7783000 10247000 8843200 15711000 15963000 9632300 6971500 9974300 10870000 42659 2368 38168 355459;355460;355461;355462;355463;355464;355465;355466;355467;355468;355469;355470;355471;355472;355473;355474;355475 281139;281140;281141;281142;281143;281144;281145;281146;281147;281148;281149;281150 281142 12 QQQTLQLQEESK Unmodified 1458.7314 0.7314363 3666 Q92817 EVPL Envoplakin yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 34.433 34.394 2 3.2276E-08 38269 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 127.76 103.73 13526000 0 0 0 6802400 0 0 0 3368900 0 3355000 0 0 0 0 0 42660 3666 38169 355476;355477;355478 281151;281152 281152 2 QQQTVFIHPNSSLFEQQPR Unmodified 2283.1396 0.13962838 384 O60231 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 75.536 75.629 3 3.02E-08 87126 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 82.482 77.723 87680000 0 0 0 2653600 0 11719000 3029400 6864000 10151000 8641300 9802200 10757000 0 0 24062000 42661 384 38170 355479;355480;355481;355482;355483;355484;355485;355486;355487;355488 281153;281154;281155;281156;281157;281158;281159;281160;281161;281162 281160 10 QQQVPVAGIR Unmodified 1094.6196 0.61964142 4461 Q9H944 MED20 Mediator of RNA polymerase II transcription subunit 20 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 42.55 42.286 2 0.0050478 47166 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 70.525 53.985 183670000 0 73880000 0 5223300 8070900 8202200 9137000 9536300 5186300 9431400 11858000 11700000 10781000 7185800 13474000 42662 4461 38171 355489;355490;355491;355492;355493;355494;355495;355496;355497;355498;355499;355500;355501 281163;281164;281165;281166;281167;281168;281169;281170;281171;281172;281173;281174 281172 12 QQREDITQSAQHALR Unmodified 1779.8976 0.8976072 2207 Q12906 ILF3 Interleukin enhancer-binding factor 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 33.837 34.019 3;4 2.1745E-45 36656 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 152 134.51 875920000 0 0 0 71195000 37945000 69305000 60883000 47887000 43447000 61973000 117490000 120020000 69675000 73087000 103020000 42663 2207 38172 355502;355503;355504;355505;355506;355507;355508;355509;355510;355511;355512;355513;355514;355515;355516;355517;355518;355519;355520;355521;355522;355523;355524;355525 281175;281176;281177;281178;281179;281180;281181;281182;281183;281184;281185;281186;281187;281188;281189;281190;281191;281192;281193;281194 281189 13 QQSAQSQVSTTAENK Unmodified 1605.7594 0.75944196 4319 Q9H0A0 NAT10 N-acetyltransferase 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 8 1 1 1 1 1 1 1 1 14.557 14.691 2 6.2712E-19 14036 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 108.56 101 58098000 0 0 0 2999700 3274600 0 12603000 10710000 12838000 6175000 4798900 4698300 0 0 0 42664 4319 38173 355526;355527;355528;355529;355530;355531;355532;355533 281195;281196;281197;281198;281199;281200 281198 6 QQSAVPLDEETHAGEDVAVFAR Unmodified 2368.1295 0.12951721 803 P05187 ALPP Alkaline phosphatase, placental type yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 74.909 75.058 3 0.0058252 86570 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 26.84 17.793 27416000 0 0 0 0 0 0 2405200 6091600 0 7806100 7320100 0 3793400 0 0 42665 803 38174 355534;355535;355536;355537;355538 281201;281202 281201 2 QQSDHDAERLR Unmodified 1353.6385 0.63853897 2501 Q15149 PLEC Plectin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 7.5113 7.5841 3 0.0088098 6139 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 39.266 26.997 20779000 0 0 0 2207800 2340900 0 2391000 2730100 0 0 0 3681600 4769200 2658200 0 42666 2501 38175 355539;355540;355541;355542;355543;355544;355545 281203 281203 1 QQSEEDLLLQDFSR Unmodified 1706.8111 0.81114318 5034 Q9UNL2 SSR3 Translocon-associated protein subunit gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 2 1 1 1 83.3 83.338 2;3 5.2055E-05 96363 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 84.479 75.966 18463000 0 0 0 0 4178300 6297200 3066500 4921200 0 0 0 0 0 0 0 42667 5034 38176 355546;355547;355548;355549;355550;355551;355552;355553;355554 281204;281205;281206;281207;281208;281209;281210;281211;281212 281206 9 QQSEISAAVER Unmodified 1216.6048 0.60477922 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 2 1 1 1 32.94 33.166 2 0.00033932 36260 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 88.681 43.52 272170000 0 0 0 15706000 18303000 13922000 22757000 19846000 16537000 27648000 34957000 35371000 22167000 16104000 28855000 42668 5216 38177 355555;355556;355557;355558;355559;355560;355561;355562;355563;355564;355565;355566;355567 281213;281214;281215;281216;281217;281218;281219;281220;281221 281219 8 QQSELQSQVR Unmodified 1201.6051 0.60511357 2452 Q14847 LASP1 LIM and SH3 domain protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 21.135 20.74 2 0.0052901 26091 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.033 58.032 579330000 0 187800000 0 10097000 7990500 9770200 13331000 10129000 6975900 10295000 70613000 72089000 18740000 51634000 109860000 42669 2452 38178 355568;355569;355570;355571;355572;355573;355574;355575;355576;355577;355578;355579;355580;355581 281222;281223 281223 1 QQSELQSQVRYK Unmodified 1492.7634 0.76340513 2452 Q14847 LASP1 LIM and SH3 domain protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 3 1 33.896 29.189 3 2.2192E-22 38966 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.7 118.12 463000000 116100000 153830000 193070000 0 0 0 0 0 0 0 0 0 0 0 0 42670 2452 38179 355582;355583;355584;355585;355586 281224;281225;281226;281227;281228;281229 281225 6 QQSFCAKPPPSPLSPVPSVVK Unmodified 2249.1878 0.18782413 3025 Q70E73 RAPH1 Ras-associated and pleckstrin homology domains-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 75.09 75.134 3 0.006687 86549 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 29.118 24.408 63838000 0 0 0 4271800 5183900 6807300 3504200 6571300 4367600 7228800 0 9722100 3920200 4983700 7276700 42671 3025 38180 355587;355588;355589;355590;355591;355592;355593;355594;355595;355596;355597 281230;281231;281232;281233;281234;281235 281232 5 QQSHFAMMHGGTGFAGIDSSSPEVK 2 Oxidation (M) 2637.1588 0.1587852 2520 Q15365 PCBP1 Poly(rC)-binding protein 1 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 2 2 1 1 1 1 1 1 1 51.693 51.771 3;4 3.5745E-19 58294 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 74.841 66.451 733300000 0 0 0 89958000 0 240130000 38694000 0 36895000 62144000 56707000 76208000 36204000 96367000 0 42672 2520 38181 355598;355599;355600;355601;355602;355603;355604;355605;355606;355607;355608 281236;281237;281238;281239;281240;281241;281242;281243;281244;281245;281246 281236 4147;4148 8 QQSHFAMMHGGTGFAGIDSSSPEVK Oxidation (M) 2621.1639 0.16387058 2520 Q15365 PCBP1 Poly(rC)-binding protein 1 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 14 1 1 3 1 2 2 1 1 1 1 59.389 59.575 3;4 5.9872E-13 67420 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.922 50.025 248880000 0 0 0 7816400 0 10313000 0 48296000 6222100 44135000 36788000 15880000 10267000 32457000 36709000 42673 2520 38181 355609;355610;355611;355612;355613;355614;355615;355616;355617;355618;355619;355620;355621;355622 281247;281248;281249;281250;281251;281252;281253;281254 281254 4147;4148 7 QQSHFAMMHGGTGFAGIDSSSPEVK Unmodified 2605.169 0.16895596 2520 Q15365 PCBP1 Poly(rC)-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 2 67.289 67.535 3;4 1.2713E-33 76550 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.435 65.54 220970000 0 0 0 0 0 19982000 0 9090200 7009600 6693200 0 9356200 10542000 9445300 148850000 42674 2520 38181 355623;355624;355625;355626;355627;355628;355629;355630;355631 281255;281256;281257;281258;281259;281260;281261;281262 281259 8 QQSIAGSADSKPIDVSR Unmodified 1757.8908 0.89079049 2205 Q12904 AIMP1 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1;Endothelial monocyte-activating polypeptide 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.218 38.398 3 1.4937E-06 42461 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 60.764 52.984 278860000 0 0 0 18769000 17884000 19371000 20570000 18155000 10907000 28386000 30790000 32660000 17994000 24857000 38518000 42675 2205 38182 355632;355633;355634;355635;355636;355637;355638;355639;355640;355641;355642;355643 281263;281264;281265;281266;281267;281268;281269;281270;281271;281272;281273;281274;281275;281276;281277 281265 14 QQSIKPGPELGGEFPVQDLK Unmodified 2166.1321 0.13208339 3590 Q8WXG6 MADD MAP kinase-activating death domain protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 77.135 77.224 3 0.0010891 89212 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 40.952 34.289 33906000 0 0 0 0 3442200 0 4429300 7100800 0 0 6981600 11952000 0 0 0 42676 3590 38183 355644;355645;355646;355647;355648 281278;281279;281280 281280 3 QQSSVTVSEPLAPNQEEVR Unmodified 2097.0338 0.033825909 2688 Q4LE39 ARID4B AT-rich interactive domain-containing protein 4B yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 58.656 58.762 2 0.00112 66862 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 61.375 55.991 31301000 0 0 0 2467700 2056400 1977600 0 3321100 2250500 3513100 4226500 3654100 3250600 0 4583700 42677 2688 38184 355649;355650;355651;355652;355653;355654;355655;355656;355657;355658 281281;281282;281283;281284;281285 281282 5 QQSTPQAANSPPNLGAK Unmodified 1707.854 0.85401105 5193 Q9Y4C1 KDM3A Lysine-specific demethylase 3A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.485 35.667 2 5.2621E-37 39435 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 134.08 126.81 108670000 0 0 0 6219200 7456700 11373000 6869700 8572000 8106400 8222200 10018000 11550000 11873000 8195000 10216000 42678 5193 38185 355659;355660;355661;355662;355663;355664;355665;355666;355667;355668;355669;355670 281286;281287;281288;281289;281290;281291;281292;281293;281294;281295;281296 281294 11 QQSTSSDRVSQTPESLDFLK Unmodified 2252.0921 0.092069069 2215 Q12965 MYO1E Unconventional myosin-Ie yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.754 71.821 3 0.00074185 81884 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.164 26.447 146700000 0 0 0 7334500 8622900 13432000 10429000 12235000 10010000 14990000 11887000 19795000 9554200 11370000 17044000 42679 2215 38186 355671;355672;355673;355674;355675;355676;355677;355678;355679;355680;355681;355682 281297;281298;281299;281300;281301;281302;281303;281304 281299 5 QQSVAHQQSGSELALRR Unmodified 1893.9769 0.97692015 631 O95235 KIF20A Kinesin-like protein KIF20A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 27.618 27.927 4 0.0017226 30064 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 31.42 14.54 138020000 0 0 0 0 0 28836000 7400300 0 8117600 10854000 12072000 39455000 0 0 31283000 42680 631 38187 355683;355684;355685;355686;355687;355688;355689 281305;281306;281307 281307 3 QQTDIAVNWAGGLHHAK Unmodified 1844.9282 0.92817905 2314 Q13547 HDAC1 Histone deacetylase 1 yes yes 0 0 0 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 58.683 58.939 4 0.0022404 66087 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.257 37.709 21797000 0 0 0 0 0 3903600 0 0 0 0 0 0 2021300 3252700 12619000 42681 2314 38188 355690;355691;355692;355693 281308 281308 1 QQTNNQTEVVK Unmodified 1287.6419 0.64189301 2721 Q5BKZ1 ZNF326 DBIRD complex subunit ZNF326 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 11.886 12.035 2 0.01715 10323 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 75.294 58.754 69130000 0 0 0 4220200 4679800 3987700 5248200 3424600 3777000 5643300 3953000 6904300 11105000 8158800 8028400 42682 2721 38189 355694;355695;355696;355697;355698;355699;355700;355701;355702;355703;355704;355705 281309;281310 281309 1 QQTSLFIAR Unmodified 1062.5822 0.58219329 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 54.917 54.844 2 0.009002 61655 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 67.993 33.74 101840000 0 0 0 11536000 12531000 15645000 14456000 13095000 0 18975000 0 0 0 15599000 0 42683 2361 38190 355706;355707;355708;355709;355710;355711;355712 281311;281312;281313;281314;281315;281316 281312 5 QQTSSRPPASVGELSSSGLGDPR Unmodified 2312.1357 0.13566522 5059 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 56.865 56.98 3 2.5704E-07 64077 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.705 43.151 139990000 0 0 0 8885400 7406500 13439000 10051000 0 8748300 10295000 13003000 25293000 11917000 9746900 21204000 42684 5059 38191 355713;355714;355715;355716;355717;355718;355719;355720;355721;355722;355723 281317;281318;281319;281320;281321;281322;281323;281324;281325;281326;281327;281328;281329;281330 281321 14 QQTSTPVLTQPGR Unmodified 1411.7419 0.7419414 2776 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 38.224 38.376 2 0.0032812 42897 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 67.726 53.956 39021000 0 0 0 3036900 3145900 3457600 3435100 2866300 2968700 3601400 4035000 6479300 0 0 5994700 42685 2776 38192 355724;355725;355726;355727;355728;355729;355730;355731;355732;355733 281331;281332;281333;281334;281335;281336;281337 281337 7 QQVADEDEIWK Unmodified 1359.6307 0.63065962 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 54.126 54.263 2 0.0010688 61189 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 75.294 66.381 118600000 0 0 0 6302300 5676900 6241700 9998500 11240000 8485600 10026000 11636000 14045000 11627000 10024000 13295000 42686 5216 38193 355734;355735;355736;355737;355738;355739;355740;355741;355742;355743;355744;355745;355746 281338;281339;281340;281341;281342;281343;281344;281345;281346;281347;281348;281349;281350;281351;281352;281353 281344 15 QQVAPTDDETGK Unmodified 1287.5943 0.59427411 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.607 14.772 2 3.0672E-08 13559 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 130.41 120.13 204100000 0 0 0 11547000 6457500 16230000 10076000 9714900 7461400 22254000 30996000 25275000 11767000 17242000 35082000 42687 2344 38194 355747;355748;355749;355750;355751;355752;355753;355754;355755;355756;355757;355758 281354;281355;281356;281357;281358;281359;281360;281361;281362;281363;281364;281365 281357 12 QQVASLETNDPILGFQATNER Unmodified 2330.1503 0.15025265 3975 Q96RS6 NUDCD1 NudC domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 2 2 2 1 2 2 2 1 1 1 82.168 82.284 2;3 1.2104E-47 94466 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 115.63 111.97 85071000 0 0 0 0 2570200 6790100 3685600 5432900 2831000 10250000 9720400 11396000 3009600 10449000 18936000 42688 3975 38195 355759;355760;355761;355762;355763;355764;355765;355766;355767;355768;355769;355770;355771;355772;355773;355774;355775 281366;281367;281368;281369;281370;281371;281372;281373;281374 281371 9 QQVEGTAQEAVSAAGAAAQQVVDQATEAGQK Unmodified 3040.4697 0.46974889 2589 Q15847 ADIRF Adipogenesis regulatory factor yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 95.336 91.306 3 0.0003381 109203 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 35.923 33.195 15879000 0 15879000 0 0 0 0 0 0 0 0 0 0 0 0 0 42689 2589 38196 355776;355777 281375 281375 1 QQVEQSSASQTGIK Unmodified 1489.7372 0.73724996 4393 Q9H4A3 WNK1 Serine/threonine-protein kinase WNK1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19.347 19.152 2 3.4165E-22 19725 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 145.91 111.38 422740000 5893600 0 0 24017000 23674000 30971000 26614000 35960000 20908000 44613000 35582000 54636000 38889000 28503000 52483000 42690 4393 38197 355778;355779;355780;355781;355782;355783;355784;355785;355786;355787;355788;355789;355790;355791 281376;281377;281378;281379;281380;281381;281382;281383;281384;281385;281386;281387;281388;281389;281390 281390 15 QQVFQGTNSLGLK Unmodified 1418.7518 0.75177781 5292 Q9Y6Q9 NCOA3 Nuclear receptor coactivator 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 63.304 63.467 2 7.4593E-07 71715 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 94.692 77.256 68268000 0 0 0 0 5744100 5776400 6414700 0 3991200 7714600 5907900 8409500 6730300 7588800 9990800 42691 5292 38198 355792;355793;355794;355795;355796;355797;355798;355799;355800;355801 281391;281392;281393;281394;281395;281396;281397;281398;281399 281397 8 QQVPSEDSMEK Unmodified 1276.5605 0.56053115 631 O95235 KIF20A Kinesin-like protein KIF20A yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 24.724 25.092 2 0.0070621 26237 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 54.982 43.817 13162000 0 0 0 0 0 2580300 0 0 0 778320 0 2864100 0 2774400 4164500 42692 631 38199 355802;355803;355804;355805;355806 281400;281401 281401 2 QQVPSGESAILDR Unmodified 1398.7103 0.71030693 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.413 51.562 2 0.0042024 58167 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 58.132 48.352 496340000 0 0 0 23383000 29492000 52165000 39575000 28798000 24936000 41998000 56162000 61135000 30036000 30697000 77958000 42693 894 38200 355807;355808;355809;355810;355811;355812;355813;355814;355815;355816;355817;355818 281402;281403;281404;281405;281406;281407;281408 281403 6 QQVQVVGLQEHLVNSADDVIK Unmodified 2318.223 0.22302366 4043 Q99661 KIF2C Kinesin-like protein KIF2C yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 80.865 80.527 3 4.4944E-21 93086 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 94.837 86.649 137860000 0 72606000 0 0 1781100 2657600 1410400 2883500 2619000 13000000 6348200 9221900 0 4557000 20779000 42694 4043 38201 355819;355820;355821;355822;355823;355824;355825;355826;355827;355828;355829 281409;281410;281411;281412;281413;281414;281415;281416;281417 281409 9 QQVQVVGLQER Unmodified 1282.6993 0.69934831 116 O00139 KIF2A Kinesin-like protein KIF2A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.875 48.038 2 0.00049778 53643 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 94.297 71.557 77370000 0 0 0 3713000 3876900 7615300 5730700 4998300 4486600 8376800 7799500 10125000 6179600 6320700 8147400 42695 116 38202 355830;355831;355832;355833;355834;355835;355836;355837;355838;355839;355840;355841 281418;281419;281420;281421;281422;281423;281424;281425;281426;281427 281425 10 QQVQVVGLQEREVK Unmodified 1638.9053 0.90531834 116 O00139 KIF2A Kinesin-like protein KIF2A yes yes 0 0 1 By MS/MS 2 0 1 1 51.587 47.666 3 0.011493 59749 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 45.115 32.95 12996000 0 0 12996000 0 0 0 0 0 0 0 0 0 0 0 0 42696 116 38203 355842 281428 281428 1 QQVSLLAQR Unmodified 1041.5931 0.59309232 202 O14686 KMT2D Histone-lysine N-methyltransferase 2D yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 43.661 44.114 2 0.0075848 49529 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 72.038 35.01 20478000 0 0 0 0 0 0 0 0 0 6710500 0 0 0 0 13767000 42697 202 38204 355843;355844 281429;281430 281429 2 QQVSPIR Unmodified 826.4661 0.4661009 4879 Q9UG63 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 19.678 19.884 2 0.02229 20321 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 105.2 79.306 649650000 0 0 0 46868000 42458000 45264000 52288000 41623000 0 74044000 78263000 81862000 59514000 52506000 74957000 42698 4879 38205 355845;355846;355847;355848;355849;355850;355851;355852;355853;355854;355855 281431;281432;281433;281434 281433 4 QQVSPIRNLSDGQK Unmodified 1568.8271 0.82706802 4879 Q9UG63 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 5 2 1 2 43.053 37.81 2;3 1.9478E-202 51972 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 273.75 215.96 347100000 314130000 10293000 22675000 0 0 0 0 0 0 0 0 0 0 0 0 42699 4879 38206 355856;355857;355858;355859;355860 281435;281436;281437 281436 2 QQVVLENAAK Unmodified 1098.6033 0.60332266 2062 Q01780 EXOSC10 Exosome component 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 30.525 30.666 2 0.001504 33303 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 90.657 63.695 35481000 0 0 0 2055100 1767400 2592200 2527500 2340800 1851600 4662800 3240100 0 3178400 3586500 7678200 42700 2062 38207 355861;355862;355863;355864;355865;355866;355867;355868;355869;355870;355871 281438;281439;281440;281441;281442;281443;281444;281445;281446 281439 9 QQYESVAAK Unmodified 1022.5033 0.50327426 870 P08670 VIM Vimentin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 15.884 16.023 2 0.0033419 14396 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 90.37 64.543 6696400000 0 0 0 423090000 432980000 507590000 554590000 338580000 296590000 727910000 0 974380000 885050000 747340000 808340000 42701 870 38208 355872;355873;355874;355875;355876;355877;355878;355879;355880;355881;355882 281447;281448;281449;281450;281451;281452;281453;281454;281455;281456;281457;281458;281459 281453 13 QQYQTEMEK Unmodified 1183.5179 0.51793805 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 19.075 19.228 2 0.036656 18411 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.775 36.535 28995000 0 0 0 2664900 1910400 2778000 3969600 2168700 0 3969000 0 3950800 2757400 0 4826000 42702 2291 38209 355883;355884;355885;355886;355887;355888;355889;355890;355891 281460 281460 1 QRAAQFDVVK Unmodified 1160.6302 0.63020611 4689 Q9NW08 POLR3B DNA-directed RNA polymerase III subunit RPC2 yes yes 0 0 1 By MS/MS 2 0 1 1 41.677 34.996 2 0.024576 48405 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 119.86 73.438 20472000 20472000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42703 4689 38210 355892 281461 281461 0 QRAEGTDIPTVK Unmodified 1313.6939 0.69392858 3861 Q96GY0 ZC2HC1A Zinc finger C2HC domain-containing protein 1A yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 30.371 30.53 3 0.036818 33579 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 21.395 6.2515 30561000 0 0 0 0 2674500 3975900 3130600 3739400 3367900 0 0 0 4662000 3766100 5244500 42704 3861 38211 355893;355894;355895;355896;355897;355898;355899;355900 281462 281462 1 QRAEVLQSTQR Unmodified 1314.7004 0.70041094 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 1 2 2 2 2 2 2 1 15.769 15.925 2;3 0.00044566 15421 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 65.179 48.24 237150000 0 0 0 15723000 11762000 14677000 18354000 11398000 12816000 18070000 40035000 37506000 20089000 29566000 7150200 42705 5216 38212 355901;355902;355903;355904;355905;355906;355907;355908;355909;355910;355911;355912;355913;355914;355915;355916;355917;355918;355919;355920;355921;355922 281463;281464;281465;281466;281467;281468;281469;281470;281471;281472;281473;281474;281475 281464 11 QRAGGEPWGAK Unmodified 1155.5785 0.57850489 3308 Q8N163 CCAR2 Cell cycle and apoptosis regulator protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 2 1 1 1 1 1 1 1 1 1 1 1 1 19.662 18.922 2;3 0.0023957 27477 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.14 49.811 314970000 257200000 0 4138200 0 3605600 3624700 4377500 3376400 4556500 5746700 5184600 6008200 5276200 4264300 7608500 42706 3308 38213 355923;355924;355925;355926;355927;355928;355929;355930;355931;355932;355933;355934;355935;355936 281476;281477;281478;281479;281480;281481;281482;281483;281484;281485;281486;281487;281488 281483 9 QRALLGYADNQCK Unmodified 1535.7515 0.75146023 4506 Q9HC38 GLOD4 Glyoxalase domain-containing protein 4 yes yes 0 0 1 By MS/MS 2 0 2 2 45.913 38.921 3 0.03544 53395 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.227 47.227 25842000 25842000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42707 4506 38214 355937;355938 281489;281490 281490 0 QRAPGEDPMDYK Unmodified 1405.6296 0.62961376 1305 P31751 AKT2 RAC-beta serine/threonine-protein kinase yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 36.235 31.526 3 0.0019081 39194 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 78.903 72.955 15022000 0 15022000 0 0 0 0 0 0 0 0 0 0 0 0 0 42708 1305 38215 355939;355940 281491;281492 281491 2 QRATAATGMNDK Unmodified 1262.6037 0.60373336 2492 Q15058 KIF14 Kinesin-like protein KIF14 yes yes 0 0 1 By MS/MS 2 0 1 1 9.6144 5.8397 3 0.018971 9804 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 37.594 23.785 5948100 5948100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42709 2492 38216 355941 281493 281493 1 QRCPPGVVPACHNSK Unmodified 1705.8141 0.81407727 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 1 By MS/MS 2 0 2 2 25.413 20.335 3;4 0.003079 28460 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.242 30.972 114440000 114440000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42710 1565 38217 355942;355943 281494;281495 281494 2 QRDETALQLSVSQEQVK Unmodified 1958.0069 0.006882877 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 55.662 55.86 3 0.0024478 62756 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 43.208 33.151 101430000 0 0 0 0 5952500 7526800 6843600 8675000 6712900 11724000 8361600 13128000 11125000 7739400 13638000 42711 2556 38218 355944;355945;355946;355947;355948;355949;355950;355951;355952;355953;355954 281496;281497;281498;281499 281498 4 QRDSEIMQQK Oxidation (M) 1277.6034 0.60339901 2016 P84101 SERF2 Small EDRK-rich factor 2 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 6.2254 6.329 3 0.00061753 4494 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 95.775 76.116 61635000 0 0 0 4147300 3472900 2651100 2574100 2313600 0 2953800 11643000 14202000 2732800 0 14944000 42712 2016 38219 355955;355956;355957;355958;355959;355960;355961;355962;355963;355964 281500;281501;281502;281503;281504;281505 281502 3269 6 QRDSEIMQQK Unmodified 1261.6085 0.60848439 2016 P84101 SERF2 Small EDRK-rich factor 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 6.9 3.81 3 1 6 1 2 1 1 1 1 1 1 1 13.747 12.568 3 8.7967E-07 15665 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 128.27 107.97 188230000 19643000 35178000 73300000 4171400 0 0 0 0 0 0 12175000 16524000 4411500 6343400 16486000 42713 2016 38219 355965;355966;355967;355968;355969;355970;355971;355972;355973;355974 281506;281507;281508;281509;281510;281511;281512;281513 281512 7 QRDYILEGEPGK Unmodified 1403.7045 0.70449327 4895 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.08 4 1 21 1 2 2 1 2 2 2 2 1 2 2 2 2 1 2 41.586 40.76 2;3 0.00015441 45196 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 73.082 64.032 718170000 6550300 19182000 40945000 46303000 36024000 40908000 53358000 67685000 36538000 61307000 68106000 69461000 58549000 37114000 76146000 42714 4895 38220 355975;355976;355977;355978;355979;355980;355981;355982;355983;355984;355985;355986;355987;355988;355989;355990;355991;355992;355993;355994;355995;355996;355997;355998;355999;356000 281514;281515;281516;281517;281518;281519;281520;281521;281522;281523;281524;281525;281526;281527;281528;281529;281530;281531;281532;281533;281534;281535 281530 20 QREAQQQQLQALIAEK Unmodified 1881.0068 0.0068232975 3270 Q8IY31 IFT20 Intraflagellar transport protein 20 homolog yes yes 0 0 1 By MS/MS 2 0 1 1 71.9 63.662 3 0.00047582 84590 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.576 59.753 7045300 7045300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42715 3270 38221 356001 281536 281536 0 QREEEERQQQEEALR Unmodified 1956.9249 0.92494416 2994 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 14.471 14.633 3;4 9.3357E-09 13836 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 92.935 67.881 323290000 0 0 0 14768000 18564000 25130000 15494000 15028000 16392000 35347000 30000000 37111000 29138000 31877000 54445000 42716 2994 38222 356002;356003;356004;356005;356006;356007;356008;356009;356010;356011;356012;356013;356014;356015;356016;356017;356018;356019;356020;356021;356022;356023;356024;356025 281537;281538;281539;281540;281541;281542;281543;281544;281545;281546 281545 10 QREELGQGLQGVEQK Unmodified 1697.8697 0.86966111 2135 Q07065 CKAP4 Cytoskeleton-associated protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 40.413 40.684 3 0.0029222 45193 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 28.296 20.555 96980000 0 0 0 0 9154200 9915100 0 0 6711300 13390000 12059000 13670000 11791000 8967400 11322000 42717 2135 38223 356026;356027;356028;356029;356030;356031;356032;356033;356034 281547;281548 281547 2 QREESETRSESSDFEVVPK Unmodified 2238.04 0.040033499 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 1 2 2 2 2 2 2 2 2 2 2 2 40.224 40.433 3;4 6.0621E-08 45073 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 78.234 70.652 415210000 0 0 0 4199200 11908000 43310000 19303000 28659000 26952000 53533000 50016000 57363000 38665000 25990000 55309000 42718 5216 38224 356035;356036;356037;356038;356039;356040;356041;356042;356043;356044;356045;356046;356047;356048;356049;356050;356051;356052;356053;356054;356055;356056;356057 281549;281550;281551;281552;281553;281554;281555;281556;281557;281558;281559;281560;281561;281562;281563;281564;281565;281566 281549 14 QREFEEYIR Unmodified 1268.6149 0.61494998 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 46.092 46.253 3 0.0082397 51359 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 61.593 52.639 100290000 0 0 0 5556100 6511900 12294000 7414500 7955000 8156000 0 9045500 17116000 13821000 0 12418000 42719 213 38225 356058;356059;356060;356061;356062;356063;356064;356065;356066;356067 281567;281568;281569;281570;281571;281572 281572 6 QREFEEYIRDK Unmodified 1511.7369 0.73685603 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.334 41.511 3 1.7431E-08 46309 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 136.27 114.64 455380000 0 0 0 12276000 5214900 49253000 20099000 23248000 35860000 27965000 25341000 66108000 46948000 36886000 106180000 42720 213 38226 356068;356069;356070;356071;356072;356073;356074;356075;356076;356077;356078;356079 281573;281574;281575;281576;281577;281578;281579;281580;281581;281582;281583 281581 7 QREGTFSK Unmodified 951.47739 0.47739386 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 1 By MS/MS 2 0 1 1 8.0498 4.5348 2 0.037501 7999 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.81 52.64 41576000 41576000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42721 2804 38227 356080 281584 281584 0 QRELAEQELEK Unmodified 1371.6994 0.69940789 2501 Q15149 PLEC Plectin yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 27.932 28.133 3 0.00026452 30630 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 86.838 71.222 118900000 0 0 0 16816000 7475700 10877000 12470000 6587900 0 10153000 14930000 9908400 13048000 5829700 10805000 42722 2501 38228 356081;356082;356083;356084;356085;356086;356087;356088;356089;356090;356091 281585;281586;281587;281588;281589;281590;281591;281592 281592 7 QREMEEQMR Unmodified 1235.5387 0.53869027 1151 P23246 SFPQ Splicing factor, proline- and glutamine-rich yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 12.434 12.562 3 0.0027251 11257 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 98.044 90.395 56886000 0 0 0 3925200 3061000 5681000 4182500 3950400 2644600 7518400 6350800 10259000 4146900 5165800 0 42723 1151 38229 356092;356093;356094;356095;356096;356097;356098;356099;356100;356101;356102 281593;281594;281595;281596;281597;281598 281596 4 QRENPGQSLNR Unmodified 1297.6487 0.64870972 1406 P39880 CUX1 Homeobox protein cut-like 1 yes yes 0 0 1 By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 10.941 11.056 3 0.0027731 8816 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 89.9 74.011 119270000 0 0 0 13548000 7808400 9425400 9827400 7677600 5927300 10423000 0 16812000 10113000 10619000 17085000 42724 1406 38230 356103;356104;356105;356106;356107;356108;356109;356110;356111;356112;356113 281599;281600 281600 0 QREPDADIRK Unmodified 1226.6367 0.63674805 4154 Q9BTY7 HGH1 Protein HGH1 homolog yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 10.893 10.419 3 0.0097913 13459 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 90.827 68.595 123350000 50552000 0 21286000 3619400 0 7457600 4271500 2823200 3225800 7060800 0 0 7870600 7141900 8041900 42725 4154 38231 356114;356115;356116;356117;356118;356119;356120;356121;356122;356123;356124 281601;281602;281603;281604 281603 0 QREQEIALRR Unmodified 1297.7215 0.72148073 2994 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 19.194 19.495 3 0.026342 19876 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 80.706 5.3187 113360000 0 0 0 0 0 18069000 0 11315000 0 13359000 0 21763000 14951000 14093000 19812000 42726 2994 38232 356125;356126;356127;356128;356129;356130;356131 281605;281606;281607 281606 0 QREQMEQMK Unmodified 1206.5485 0.54852667 2403 Q14320 FAM50A Protein FAM50A yes yes 0 0 1 By MS/MS 10 0 1 1 8.3363 8.6952 3 0.036864 6751 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 40.994 29.4 9963800 0 0 0 0 0 0 0 0 0 0 9963800 0 0 0 0 42727 2403 38233 356132 281608 281608 1 QRGDQLVPFSTK Unmodified 1374.7256 0.72556306 4151 Q9BTV4 TMEM43 Transmembrane protein 43 yes yes 0 0 1 By MS/MS By MS/MS By matching 10 0 3 1 1 1 52.023 51.654 3 0.018047 59185 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 37.793 28.355 12078000 0 0 0 5210300 2405700 0 4462100 0 0 0 0 0 0 0 0 42728 4151 38234 356133;356134;356135 281609 281609 1 QRGSETDTDSEIHESASDK Unmodified 2090.8988 0.89884857 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 1 By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.88 14.042 3 5.0693E-54 13320 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 150.68 141.12 100850000 0 0 0 7110500 6525400 5501100 4666100 4260500 4687700 13837000 9298200 14803000 10632000 6540100 12988000 42729 5216 38235 356136;356137;356138;356139;356140;356141;356142;356143;356144;356145;356146;356147 281610;281611;281612;281613;281614 281610 5 QRGSETGSETHESDLAPSDK Unmodified 2129.9461 0.94613311 1546 P48634 PRRC2A Protein PRRC2A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 2 2 1 1 2 2 1 2 1 2 15.857 16.057 3;4 5.2336E-47 14904 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 113.47 104.29 95299000 0 0 0 0 5465300 5143500 2459600 2968600 0 8693700 13325000 11578000 18009000 10643000 17014000 42730 1546 38236 356148;356149;356150;356151;356152;356153;356154;356155;356156;356157;356158;356159;356160;356161;356162;356163 281615;281616;281617;281618;281619;281620;281621;281622;281623;281624;281625;281626 281621 12 QRIAEENIMK Unmodified 1230.6391 0.63905624 2403 Q14320 FAM50A Protein FAM50A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 38.857 33.816 3 0.0002002 42290 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 117.7 83.006 238570000 190540000 19170000 28853000 0 0 0 0 0 0 0 0 0 0 0 0 42731 2403 38237 356164;356165;356166 281627;281628 281628 2 QRIAEENIMK Oxidation (M) 1246.634 0.63397086 2403 Q14320 FAM50A Protein FAM50A yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 23.554 19.582 3 0.036855 25290 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 44.882 28.505 139380000 88904000 0 50476000 0 0 0 0 0 0 0 0 0 0 0 0 42732 2403 38237 356167;356168 281629 281629 1 QRIDEFEAL Unmodified 1119.556 0.55603812 1017 P15311 EZR Ezrin yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 73.724 69.711 2 6.7506E-05 87847 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 154.35 137.57 619790000 0 574700000 45091000 0 0 0 0 0 0 0 0 0 0 0 0 42733 1017 38238 356169;356170 281630;281631 281630 1 QRIDEFEAM Unmodified 1137.5125 0.51245874 1345 P35241 RDX Radixin yes yes 0 0 1 By MS/MS 2 0 1 1 64.515 58.598 2 0.0051226 75096 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 137.18 100.48 177370000 0 177370000 0 0 0 0 0 0 0 0 0 0 0 0 0 42734 1345 38239 356171 281632 281632 0 QRIDEFEAM Oxidation (M) 1153.5074 0.50737336 1345 P35241 RDX Radixin yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 43.571 38.344 2 0.023895 49679 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.68 44.767 207150000 18069000 182880000 6198500 0 0 0 0 0 0 0 0 0 0 0 0 42735 1345 38239 356172;356173;356174 281633 281633 0 QRIDEFESM Oxidation (M) 1169.5023 0.50228799 1198 P26038 MSN Moesin yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 37.199 36.176 2 1.6366E-07 45039 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 198.07 185.54 545750000 26196000 388750000 15393000 4751800 2693700 2416100 3983300 2931900 0 0 17861000 20865000 7014800 14643000 38259000 42736 1198 38240 356175;356176;356177;356178;356179;356180;356181;356182;356183;356184;356185;356186;356187 281634;281635;281636 281634 1739 1 QRIDEFESM Unmodified 1153.5074 0.50737336 1198 P26038 MSN Moesin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 59.937 53.962 2 0.026857 69234 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.9 36.176 601590000 33683000 559850000 8064400 0 0 0 0 0 0 0 0 0 0 0 0 42737 1198 38240 356188;356189;356190 281637 281637 0 QRLAQEEESEAK Unmodified 1416.6845 0.68448611 167 O00541 PES1 Pescadillo homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 1 2 2 2 2 11.753 11.887 2;3 3.4658E-43 11147 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 179.19 155.12 1122700000 0 0 0 86046000 90115000 100610000 84589000 71955000 98079000 119980000 48243000 124290000 110290000 62880000 125590000 42738 167 38241 356191;356192;356193;356194;356195;356196;356197;356198;356199;356200;356201;356202;356203;356204;356205;356206;356207;356208;356209;356210;356211;356212;356213 281638;281639;281640;281641;281642;281643;281644;281645;281646;281647;281648;281649;281650;281651;281652;281653;281654;281655 281641 15 QRLEELQLFK Unmodified 1302.7296 0.7295858 3950 Q96PZ0 PUS7 Pseudouridylate synthase 7 homolog yes yes 0 0 1 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 71.451 71.716 3 0.0011743 81781 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.533 62.157 14586000 0 0 0 0 0 0 0 0 0 0 0 2931100 1385700 1727500 8541700 42739 3950 38242 356214;356215;356216;356217 281656 281656 1 QRLGGGPSDAK Unmodified 1084.5625 0.56252048 1305 P31751 AKT2 RAC-beta serine/threonine-protein kinase yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 9.2114 6.2063 2 0.0028644 10444 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 100.58 62.035 44906000 42087000 0 2819000 0 0 0 0 0 0 0 0 0 0 0 0 42740 1305 38243 356218;356219 281657 281657 1 QRLGGGSEDAK Unmodified 1116.5523 0.55234972 1304 P31749 AKT1 RAC-alpha serine/threonine-protein kinase yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 6.8321 3.9658 2 0.026506 5863 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 80.688 21.771 29163000 17841000 0 11322000 0 0 0 0 0 0 0 0 0 0 0 0 42741 1304 38244 356220;356221 281658;281659 281659 2 QRLSSQIEK Unmodified 1087.5986 0.59857163 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 19.788 16.126 2 5.6422E-07 23044 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 182.4 66.149 310410000 308300000 0 2109400 0 0 0 0 0 0 0 0 0 0 0 0 42742 965 38245 356222;356223 281660;281661 281660 2 QRNDVFYLQPER Unmodified 1563.7794 0.77938954 2834 Q5VZL5 ZMYM4 Zinc finger MYM-type protein 4 yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 57.013 57.152 3 0.019707 65298 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 37.248 23.285 12624000 0 0 0 0 0 8360400 0 0 0 0 0 0 4263300 0 0 42743 2834 38246 356224;356225 281662 281662 1 QRNGALDQQK Unmodified 1156.5949 0.59488324 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 6.4536 3.4894 2 9.0979E-60 6417 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 223.84 155.42 282980000 234650000 15541000 32790000 0 0 0 0 0 0 0 0 0 0 0 0 42744 965 38247 356226;356227;356228 281663;281664;281665 281664 2 QRPADAEDLPAAPGQSIDK Unmodified 1977.9756 0.97558275 3361 Q8N6R0 METTL13 Methyltransferase-like protein 13 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 48.667 48.611 3 0.0036373 55417 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 25.41 14.148 79856000 0 0 0 7787400 12526000 0 14053000 0 9691200 17158000 18639000 0 0 0 0 42745 3361 38248 356229;356230;356231;356232;356233;356234 281666;281667;281668;281669;281670;281671 281671 2 QRPDLGSAQK Unmodified 1098.5782 0.57817054 1332 P33991 MCM4 DNA replication licensing factor MCM4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.384 11.501 2 0.014195 10011 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 128.27 86.377 44598000 0 0 0 2504900 1453300 3727300 3293300 3210600 2403300 4615000 0 6013700 2970000 5258200 9148800 42746 1332 38249 356235;356236;356237;356238;356239;356240;356241;356242;356243;356244;356245 281672;281673;281674;281675 281675 4 QRPGASTDSSTQGANLPDFELLSR Unmodified 2546.2361 0.23610754 5059 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 79.805 79.943 3 1.3823E-11 92124 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.845 55.28 29915000 0 0 0 0 0 4407300 0 0 4249600 0 0 0 0 0 21258000 42747 5059 38250 356246;356247;356248 281676 281676 0 QRPGQQVATCVR Unmodified 1398.715 0.71501515 517 O75534 CSDE1 Cold shock domain-containing protein E1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 19.242 19.387 3 0.0063546 18510 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 47.712 38.644 51965000 0 0 0 2496500 2325600 5000400 3124500 3672500 3737300 4482500 9165000 12669000 0 5291600 0 42748 517 38251 356249;356250;356251;356252;356253;356254;356255;356256;356257;356258 281677 281677 1 QRPQATAEQIR Unmodified 1296.6898 0.68984626 2380 Q14157 UBAP2L Ubiquitin-associated protein 2-like yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.68 1.57 1 24 1 2 2 2 2 2 2 2 2 2 2 2 2 16.678 16.653 2;3 2.6792E-16 15083 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 160.91 135.2 2116000000 20207000 0 0 127920000 101920000 141540000 185710000 134810000 139490000 184960000 220130000 268020000 146210000 182460000 262620000 42749 2380 38252 356259;356260;356261;356262;356263;356264;356265;356266;356267;356268;356269;356270;356271;356272;356273;356274;356275;356276;356277;356278;356279;356280;356281;356282;356283 281678;281679;281680;281681;281682;281683;281684;281685;281686;281687;281688;281689;281690;281691;281692;281693;281694;281695 281687 11 QRPRPEPLIIPTK Unmodified 1543.9198 0.91984619 2958 Q6PJG2 ELMSAN1 ELM2 and SANT domain-containing protein 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 2 1 1 2 2 1 1 2 2 2 2 48.367 48.563 3;4 0.019864 53845 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 37.594 31.562 210490000 0 0 0 12210000 12544000 16518000 12534000 14960000 17542000 12902000 14840000 26445000 18229000 18412000 33356000 42750 2958 38253 356284;356285;356286;356287;356288;356289;356290;356291;356292;356293;356294;356295;356296;356297;356298;356299;356300;356301;356302 281696;281697;281698 281697 1 QRQDLANLQK Unmodified 1212.6575 0.65748349 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 26.87 22.608 3 0.0041459 28484 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 63.076 43.417 72151000 64442000 0 7708600 0 0 0 0 0 0 0 0 0 0 0 0 42751 2193 38254 356303;356304 281699 281699 1 QRQEEPPPGPQRPDQSAAAAGPGDPK Unmodified 2680.2954 0.29535376 4087 Q9BQ61 C19orf43 Uncharacterized protein C19orf43 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 1 2 2 2 30.597 30.763 3;4 1.8236E-27 33305 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 59.282 52.089 315500000 0 0 0 18001000 18021000 31142000 27367000 22613000 17447000 30624000 30272000 29018000 27328000 25201000 38468000 42752 4087 38255 356305;356306;356307;356308;356309;356310;356311;356312;356313;356314;356315;356316;356317;356318;356319;356320;356321;356322;356323;356324;356325;356326;356327 281700;281701;281702;281703;281704;281705;281706;281707;281708;281709;281710;281711;281712;281713;281714;281715;281716;281717 281710 17 QRQIEQEK Unmodified 1057.5516 0.55162144 3279 Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 6.0475 3.3248 2 2.9422E-37 5232 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 217.81 78.492 48539000 0 8799700 39739000 0 0 0 0 0 0 0 0 0 0 0 0 42753 3279 38256 356328;356329 281718 281718 1 QRQLAEAHAQAK Unmodified 1349.7164 0.71639536 2501 Q15149 PLEC Plectin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 7.1105 6.8935 3 0.00039426 4798 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 74.46 62.594 109900000 31840000 0 0 7150800 4932800 5176900 8313700 4853400 6773000 9183100 0 7787300 8144400 6819400 8923800 42754 2501 38257 356330;356331;356332;356333;356334;356335;356336;356337;356338;356339;356340;356341 281719;281720;281721;281722;281723;281724;281725;281726;281727;281728;281729 281728 11 QRQLAEGTAQQR Unmodified 1384.7171 0.71712364 2501 Q15149 PLEC Plectin yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 9.4893 9.6128 3 0.0031176 8177 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 42.629 15.201 47871000 0 0 0 6286400 4129100 3803000 0 3685800 2715800 4058600 0 8600500 4653200 3710700 6228000 42755 2501 38258 356342;356343;356344;356345;356346;356347;356348;356349;356350;356351 281730;281731;281732;281733;281734 281730 2 QRQPREDGNEEDK Unmodified 1599.7237 0.72372516 1955 P67809 YBX1 Nuclease-sensitive element-binding protein 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 1 2 2 2 2 2 2 2 2 5.5251 5.6432 3;4 6.7777E-15 3569 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 138.89 108.91 745220000 0 0 0 103430000 121280000 79088000 21046000 73260000 31271000 74099000 56911000 70999000 47992000 13570000 52274000 42756 1955 38259 356352;356353;356354;356355;356356;356357;356358;356359;356360;356361;356362;356363;356364;356365;356366;356367;356368;356369;356370;356371;356372;356373;356374 281735;281736;281737;281738;281739;281740;281741;281742;281743 281740 6 QRSAAQPSTSPAEVQSLK Unmodified 1883.9701 0.97010344 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 1 2 43.375 36.582 3 4.478E-05 46627 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 63.918 52.973 27993000 27993000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42757 2446 38260 356375;356376;356377 281744;281745;281746 281745 3 QRSLASDITDEQK Unmodified 1489.7372 0.73724996 1032 P16083 NQO2 Ribosyldihydronicotinamide dehydrogenase [quinone] yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 2 3 2 39.576 34.572 2;3 7.2218E-46 45189 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 218.62 163.64 306770000 62743000 84653000 159370000 0 0 0 0 0 0 0 0 0 0 0 0 42758 1032 38261 356378;356379;356380;356381;356382;356383;356384 281747;281748;281749;281750;281751;281752;281753;281754;281755 281750 8 QRSRDAVETNEK Unmodified 1431.7066 0.70661853 238 O14981 BTAF1 TATA-binding protein-associated factor 172 yes yes 0 0 2 By MS/MS 2 0 1 1 6.517 3.0848 3 9.0928E-05 6092 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 105.65 68.667 93613000 93613000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42759 238 38262 356385 281756 281756 1 QRTNPSPTNPFSSDLQK Unmodified 1915.9388 0.93880331 1597 P49757 NUMB Protein numb homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 52.973 52.305 3 0.0051232 58909 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 25.586 22.526 114020000 14599000 0 0 5470700 6722400 5347000 9577500 0 9045600 12090000 13939000 0 9988600 9332500 17908000 42760 1597 38263 356386;356387;356388;356389;356390;356391;356392;356393;356394;356395;356396 281757;281758;281759;281760;281761 281757 5 QRVAEVLNDPENMEK Oxidation (M) 1786.852 0.85196214 2143 Q07866 KLC1 Kinesin light chain 1 yes yes 0 1 1 By MS/MS 2 0 1 1 42.242 38.574 3 0.0032818 48555 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 55.885 51.581 16108000 0 0 16108000 0 0 0 0 0 0 0 0 0 0 0 0 42761 2143 38264 356397 281762 281762 3450 1 QRVIFTSPIK Unmodified 1187.7026 0.70264277 1451 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 2 1 55.398 55.78 3 0.0041194 62745 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 66.19 45.413 37670000 0 0 0 0 0 0 0 0 0 0 6841100 7189200 5689800 7603100 10347000 42762 1451 38265 356398;356399;356400;356401;356402;356403;356404 281763;281764;281765;281766;281767;281768 281768 6 QRYEILTPNSIPK Unmodified 1557.8515 0.85149185 1356 P35579 MYH9 Myosin-9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.945 65.033 3 0.00037336 74866 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 78.157 69.107 2228300000 0 0 0 101040000 139140000 182720000 169710000 166340000 135550000 205550000 191450000 299080000 190660000 169300000 277770000 42763 1356 38266 356405;356406;356407;356408;356409;356410;356411;356412;356413;356414;356415;356416 281769;281770;281771;281772;281773;281774;281775;281776;281777;281778;281779;281780;281781;281782;281783;281784 281780 13 QRYLDEAEREK Unmodified 1435.7056 0.7055559 4800 Q9P0W2 HMG20B SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related yes yes 0 0 2 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 22.916 23.129 3 0.00097049 23029 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 97.957 64.857 114820000 0 0 0 5073500 0 6402500 9544200 9722700 9089200 15693000 10474000 22226000 14790000 11807000 0 42764 4800 38267 356417;356418;356419;356420;356421;356422;356423;356424;356425;356426 281785;281786;281787;281788;281789;281790;281791;281792 281791 7 QRYPDGIISK Unmodified 1175.6299 0.62987176 3141 Q86U44 METTL3 N6-adenosine-methyltransferase 70 kDa subunit yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 35.543 35.73 3 0.0049714 38139 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.452 41.094 49417000 0 0 0 2413700 2740000 4236300 3018100 3311200 0 3771800 4987100 4793100 6491200 3346200 10308000 42765 3141 38268 356427;356428;356429;356430;356431;356432;356433;356434;356435;356436;356437 281793 281793 1 QRYPGQVILK Unmodified 1200.6979 0.69789175 3374 Q8N9B5 JMY Junction-mediating and -regulatory protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 42.811 43.001 3 0.029174 47854 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 39.001 24.322 47098000 0 0 0 0 5296100 0 0 3948700 4721700 6431000 0 12415000 9128500 5156700 0 42766 3374 38269 356438;356439;356440;356441;356442;356443;356444 281794 281794 1 QSACNLEK Unmodified 948.43348 0.43348014 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 8.4306 8.5563 2 0.0047764 6745 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 129.42 44.506 406780000 0 0 0 39430000 42748000 43198000 39811000 34308000 0 23751000 52439000 40532000 41952000 20250000 28357000 42767 1356 38270 356445;356446;356447;356448;356449;356450;356451;356452;356453;356454;356455 281795;281796;281797;281798;281799;281800;281801;281802;281803;281804;281805 281799 7 QSAEEQAQAR Unmodified 1116.516 0.51596421 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 6.4633 6.5701 2 0.00054132 4434 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 127.68 106.22 26579000 0 0 0 3672300 2491800 2292200 3605500 2926100 2953100 1090200 0 2488000 1999400 1530700 1529700 42768 2501 38271 356456;356457;356458;356459;356460;356461;356462;356463;356464;356465;356466 281806;281807;281808;281809;281810 281807 5 QSAEEQAQARAQAQAAAEK Unmodified 1984.9562 0.95624429 2501 Q15149 PLEC Plectin yes yes 0 0 1 By MS/MS 2 0 1 1 36.852 31.937 3 0.0043601 41853 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 51.819 30.286 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42769 2501 38272 356467 281811 281811 1 QSAEQLEDKK Unmodified 1174.583 0.58298115 653 O95394 PGM3 Phosphoacetylglucosamine mutase yes yes 0 0 1 By MS/MS 2.67 0.471 1 2 3 11.627 8.2738 2;3 1.6286E-08 11505 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 182.39 117.14 73568000 0 73568000 0 0 0 0 0 0 0 0 0 0 0 0 0 42770 653 38273 356468;356469;356470 281812;281813;281814 281812 2 QSAGPNSPTGGGGGGGSGGTR Unmodified 1714.7619 0.76190158 34 A7E2V4 ZSWIM8 Zinc finger SWIM domain-containing protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 9.6526 9.7651 2 0.00047279 8109 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 49.298 46.678 22807000 0 0 0 1517000 1608900 1438900 2252800 2337300 1550600 1405300 0 3742700 2684800 1631500 2637400 42771 34 38274 356471;356472;356473;356474;356475;356476;356477;356478;356479;356480;356481 281815;281816 281816 2 QSALLINGTLK Unmodified 1156.6816 0.68157298 1655 P51531 SMARCA2 Probable global transcription activator SNF2L2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 65.275 65.497 2 0.041545 74913 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 36.585 11.011 30905000 0 0 0 0 0 5415600 0 0 0 5426900 5670500 0 3688100 5021500 5682300 42772 1655 38275 356482;356483;356484;356485;356486;356487 281817 281817 1 QSALMVNGVLK Oxidation (M) 1174.638 0.63799361 1656 P51532 SMARCA4 Transcription activator BRG1 yes yes 0 1 0 By MS/MS 2 0 1 1 64.179 58.272 2 0.025809 74724 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.699 8.659 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42773 1656 38276 356488 281818 281818 1 QSAQFWNATFAK Unmodified 1397.6728 0.67279921 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 74.807 74.185 2 0.0011274 85207 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.014 77.433 100300000 30524000 0 0 0 4893700 0 5310100 6732100 4792900 7817400 6170200 11391000 7777800 5479900 9407200 42774 2804 38277 356489;356490;356491;356492;356493;356494;356495;356496;356497;356498;356499 281819;281820;281821;281822;281823;281824;281825;281826;281827 281821 9 QSAQLTALAAQQQAAGK Unmodified 1683.8904 0.89039656 3732 Q96A49 SYAP1 Synapse-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.8 2.76 2 2 21 4 2 2 2 2 1 2 2 1 1 2 2 2 52.38 51.615 2;3 3.569E-255 57236 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 238.2 224.53 1092100000 0 193300000 0 35971000 57428000 54593000 68365000 30782000 50125000 69259000 63151000 63681000 96145000 77135000 232140000 42775 3732 38278 356500;356501;356502;356503;356504;356505;356506;356507;356508;356509;356510;356511;356512;356513;356514;356515;356516;356517;356518;356519;356520;356521;356522;356523;356524 281828;281829;281830;281831;281832;281833;281834;281835;281836;281837;281838;281839;281840;281841;281842;281843;281844;281845;281846;281847;281848;281849;281850;281851;281852;281853;281854;281855 281836 22 QSAQLTALAAQQQAAGKEEK Unmodified 2070.0705 0.070545766 3732 Q96A49 SYAP1 Synapse-associated protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 47.262 47.437 3 3.5961E-05 53844 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 40.88 31.465 190710000 0 0 0 11280000 11473000 0 24272000 12044000 8874900 24161000 28072000 24899000 19220000 13971000 12440000 42776 3732 38279 356525;356526;356527;356528;356529;356530;356531;356532;356533;356534;356535 281856;281857;281858;281859;281860;281861;281862;281863;281864;281865;281866 281866 9 QSDDEVYAPGLDIESSLK Unmodified 1964.9215 0.92148149 2539 Q15459 SF3A1 Splicing factor 3A subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81.923 81.054 2;3 7.774E-97 94377 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 224.16 210.96 442890000 20434000 70067000 0 6561900 26848000 27765000 19392000 24160000 22410000 41304000 37305000 48341000 20508000 28838000 48958000 42777 2539 38280 356536;356537;356538;356539;356540;356541;356542;356543;356544;356545;356546;356547;356548;356549 281867;281868;281869;281870;281871;281872;281873;281874;281875;281876;281877;281878;281879;281880;281881 281880 14 QSDTSGPVTTSK Unmodified 1206.5728 0.57281039 1469 P42858 HTT Huntingtin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 10.245 10.312 2 0.005898 8987 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 52.79 40.942 5955300 0 0 0 752090 0 1771400 687260 0 562910 1262600 0 0 0 919030 0 42778 1469 38281 356550;356551;356552;356553;356554;356555 281882;281883;281884;281885 281883 4 QSEAENTEQVNK Unmodified 1375.6216 0.6215515 4616 Q9NRY5 FAM114A2 Protein FAM114A2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 8.3332 8.4565 2 1.5644E-67 5946 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 233.09 206.09 100650000 0 0 0 7959400 3861900 5070700 5210700 6662900 5174100 9430800 18801000 0 16747000 8877100 12854000 42779 4616 38282 356556;356557;356558;356559;356560;356561;356562;356563;356564;356565;356566;356567 281886;281887;281888;281889;281890;281891;281892;281893;281894;281895 281890 10 QSEAEVVTEIQLEK Unmodified 1601.8148 0.81483158 2427 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 76.394 71.557 2 3.1554E-14 89437 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.92 89.857 26138000 0 26138000 0 0 0 0 0 0 0 0 0 0 0 0 0 42780 2427 38283 356568 281896 281896 1 QSEAVHLQREK Unmodified 1323.6895 0.6895119 4641 Q9NU22 MDN1 Midasin yes yes 0 0 1 By MS/MS 2 0 1 1 16.912 12.703 3 0.0012642 18522 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.605 55.897 20638000 20638000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42781 4641 38284 356569 281897 281897 1 QSEDLGSQFTEIFIK Unmodified 1740.857 0.85703074 430 O60763 USO1 General vesicular transport factor p115 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 90.14 90.249 2 0.00050888 104874 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 80.979 66.007 34490000 0 0 0 0 1077900 3888300 1127500 2906800 1550000 6501000 4594000 3007200 0 1705700 8132000 42782 430 38285 356570;356571;356572;356573;356574;356575;356576;356577;356578;356579 281898;281899;281900;281901;281902 281900 5 QSEENNNLQSQVQK Unmodified 1644.7703 0.770341 3135 Q86TG7 PEG10 Retrotransposon-derived protein PEG10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.282 22.486 2 2.095E-60 22524 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 217.14 198.82 221090000 0 0 0 14820000 14281000 21863000 11084000 15009000 10068000 23050000 16230000 31438000 24364000 18721000 20164000 42783 3135 38286 356580;356581;356582;356583;356584;356585;356586;356587;356588;356589;356590;356591 281903;281904;281905;281906;281907;281908;281909;281910;281911;281912;281913;281914 281906 11 QSEQQRETLAQLQQEFQR Unmodified 2246.104 0.10397116 264 O15212 PFDN6 Prefoldin subunit 6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 73.389 73.688 3 0.0001269 84321 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.528 51.736 58830000 0 0 0 0 0 0 0 0 0 0 12611000 6847700 0 0 39371000 42784 264 38287 356592;356593;356594 281915;281916;281917;281918 281915 3 QSESSHGWTGPSTGVR Unmodified 1671.7601 0.76011066 78 CON__P20930;P20930 FLG Filaggrin yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 31.648 31.836 3 0.0010166 34040 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 50.608 42.504 + 64523000 0 0 0 7120800 0 7814300 6763400 5848700 0 8173000 9752800 14680000 4370600 0 0 42785 78 38288 356595;356596;356597;356598;356599;356600;356601;356602 281919;281920;281921;281922;281923;281924;281925 281924 7 QSETYNYLLAK Unmodified 1328.6612 0.66123147 4442 Q9H814 PHAX Phosphorylated adapter RNA export protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 60.776 60.844 2 0.0032777 68654 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 64.297 45.194 77369000 0 0 0 4594400 4337600 5119600 5087800 6408700 2881800 7318600 9506700 0 8525700 9532500 14055000 42786 4442 38289 356603;356604;356605;356606;356607;356608;356609;356610;356611;356612;356613 281926;281927;281928;281929;281930 281929 3 QSFCAQEAPTASQGLLK Unmodified 1834.8883 0.88834765 2843 Q66K14 TBC1D9B TBC1 domain family member 9B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 65.212 65.37 2 2.9168E-06 74206 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.324 69.623 37347000 0 0 0 0 2327000 3916400 3101600 2623300 0 4244400 3521900 4905900 3009400 4317500 5379900 42787 2843 38290 356614;356615;356616;356617;356618;356619;356620;356621;356622;356623;356624 281931;281932;281933;281934;281935;281936;281937;281938;281939 281933 9 QSFDDNDSEELEDK Unmodified 1669.6591 0.6591188 437 O60841 EIF5B Eukaryotic translation initiation factor 5B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.673 38.866 2 1.38E-13 43187 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 111.63 107.33 44766000 0 0 0 4101500 0 5685300 4005600 0 2693700 4141500 7868200 9324300 3337400 3608300 0 42788 437 38291 356625;356626;356627;356628;356629;356630;356631;356632;356633;356634;356635;356636 281940;281941;281942;281943;281944;281945;281946;281947;281948;281949;281950;281951 281941 12 QSFTMVADTPENLR Unmodified 1607.7614 0.76135622 2452 Q14847 LASP1 LIM and SH3 domain protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 71.137 71.337 2 3.1625E-61 81372 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 224.66 173.22 158960000 0 0 0 0 0 5358600 3846500 5399700 2604900 5235400 29636000 24908000 0 19354000 62618000 42789 2452 38292 356637;356638;356639;356640;356641;356642;356643;356644;356645;356646 281952;281953;281954;281955;281956;281957;281958;281959;281960;281961;281962 281956 11 QSFTMVADTPENLR Oxidation (M) 1623.7563 0.75627084 2452 Q14847 LASP1 LIM and SH3 domain protein 1 yes yes 0 1 0 By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 2 1 1 1 2 2 61.23 61.437 2 1.9425E-14 69593 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 116.74 92.886 129450000 0 0 0 3545400 0 0 6003400 2211400 0 8235600 16409000 16317000 3485900 21922000 51317000 42790 2452 38292 356647;356648;356649;356650;356651;356652;356653;356654;356655;356656;356657;356658 281963;281964;281965;281966;281967;281968 281965 4031 6 QSFTMVADTPENLRLK Unmodified 1848.9404 0.94038322 2452 Q14847 LASP1 LIM and SH3 domain protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 79.684 74.973 3 0.00033988 92201 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 70.197 62.083 526430000 295590000 152500000 78337000 0 0 0 0 0 0 0 0 0 0 0 0 42791 2452 38293 356659;356660;356661;356662 281969;281970;281971;281972;281973;281974 281974 6 QSFTMVADTPENLRLK Oxidation (M) 1864.9353 0.93529784 2452 Q14847 LASP1 LIM and SH3 domain protein 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 74.263 69.238 3 0.00010822 85449 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 90.348 85.098 303260000 106520000 96445000 100290000 0 0 0 0 0 0 0 0 0 0 0 0 42792 2452 38293 356663;356664;356665;356666 281975;281976;281977 281977 4031 3 QSFTQSLK Unmodified 937.4869 0.48689592 4350 Q9H1H9 KIF13A Kinesin-like protein KIF13A yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 37.72 31.981 2 0.030682 41964 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.692 36.394 67469000 4905500 62563000 0 0 0 0 0 0 0 0 0 0 0 0 0 42793 4350 38294 356667;356668 281978 281978 1 QSFVPVRPGPR Unmodified 1238.6884 0.68838969 1146 P22735 TGM1 Protein-glutamine gamma-glutamyltransferase K yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 43.332 43.454 3 0.0003708 49338 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 67.726 57.721 350450000 0 0 0 124950000 17270000 25221000 21047000 47655000 17930000 25693000 23782000 0 24039000 9532900 13332000 42794 1146 38295 356669;356670;356671;356672;356673;356674;356675;356676;356677;356678;356679 281979;281980;281981;281982;281983;281984;281985;281986;281987;281988;281989;281990 281989 12 QSGEAFVELGSEDDVK Unmodified 1708.7792 0.77917435 1692 P52597 HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 66.735 66.798 2 1.8827E-59 75650 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 172.57 160.36 515970000 0 0 0 21254000 26170000 37724000 29152000 39001000 28935000 77032000 0 63598000 54303000 44595000 94204000 42795 1692 38296 356680;356681;356682;356683;356684;356685;356686;356687;356688;356689;356690 281991;281992;281993;281994;281995;281996;281997;281998;281999;282000;282001;282002;282003;282004;282005;282006;282007;282008;282009;282010;282011 281997 21 QSGEPFLQDGSCINVAPHLHK Unmodified 2333.1223 0.12226376 3061 Q7LBC6 KDM3B Lysine-specific demethylase 3B yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 71.068 71.292 4 0.025529 81274 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 22.24 19.049 36319000 0 0 0 0 0 0 0 0 4425100 4067600 0 6606000 3451200 5549100 12220000 42796 3061 38297 356691;356692;356693;356694;356695;356696 282012 282012 1 QSGESIDIITR Unmodified 1217.6252 0.62518031 2608 Q16531 DDB1 DNA damage-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 53.008 53.491 2 0.00063554 60745 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 78.759 54.908 140060000 0 0 0 0 0 0 0 0 0 24519000 32634000 30730000 0 0 52181000 42797 2608 38298 356697;356698;356699;356700 282013;282014;282015;282016 282014 3 QSGFVPESMFDR Unmodified 1398.6238 0.6238001 4814 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 77.233 77.421 2 0.010965 89299 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 45.879 31.213 5774400 0 0 0 0 0 0 0 5774400 0 0 0 0 0 0 0 42798 4814 38299 356701;356702;356703 282017;282018;282019 282018 3 QSGLSSLVNGK Unmodified 1088.5826 0.58258722 5052 Q9UPN9 TRIM33 E3 ubiquitin-protein ligase TRIM33 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 55.239 48.262 2 0.0074554 62837 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.363 44.191 67818000 23769000 44050000 0 0 0 0 0 0 0 0 0 0 0 0 0 42799 5052 38300 356704;356705 282020 282020 1 QSGPGAPNLDR Unmodified 1110.5418 0.54178503 242 O15027 SEC16A Protein transport protein Sec16A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 27.2 27.451 2 0.021343 28480 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.336 29.38 57802000 0 0 0 4382500 0 6968500 5228800 3645200 3548400 5198700 5652700 6427400 5586300 4440400 6723400 42800 242 38301 356706;356707;356708;356709;356710;356711;356712;356713;356714;356715;356716 282021;282022;282023 282021 3 QSGQTDPLQK Unmodified 1100.5462 0.54620171 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 17.76 17.948 2 0.0048243 18364 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 71.425 38.163 79514000 0 0 0 8001000 6459000 6744700 5412300 2965800 5926600 6707400 5968100 11627000 9064800 4794900 5842200 42801 1518 38302 356717;356718;356719;356720;356721;356722;356723;356724;356725;356726;356727;356728 282024;282025;282026 282026 3 QSGSPEEMVLLPR Oxidation (M) 1457.7184 0.71842877 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 59.978 59.958 2 1.0081E-07 68472 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 97.734 83.964 68279000 0 0 0 6812100 9804500 6507700 9569900 9875700 6391100 0 10294000 0 9024100 0 0 42802 3023 38303 356729;356730;356731;356732;356733;356734;356735;356736 282027;282028;282029;282030;282031;282032;282033;282034;282035 282029 4636 9 QSGSPEEMVLLPR Unmodified 1441.7235 0.72351415 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.984 75.045 2 4.9551E-05 86456 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 88.441 67.571 122230000 0 0 0 5447200 9554000 9537600 6734200 10048000 7192600 11059000 11824000 19475000 9399300 9350200 12606000 42803 3023 38303 356737;356738;356739;356740;356741;356742;356743;356744;356745;356746;356747;356748 282036;282037;282038;282039;282040;282041;282042;282043;282044;282045;282046;282047 282045 12 QSGSRGGSGGGGSISGGGYGSGGGSGGR Unmodified 2255.9864 0.98637522 79 CON__P35908v2;P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 0 1 By MS/MS 10 0 1 1 14.241 14.673 3 2.7066E-14 13801 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 54.167 40.742 + 16310000 0 0 0 0 0 0 0 0 0 0 0 16310000 0 0 0 42804 79 38304 356749 282048 282048 1 QSGVVVEEPPPSK Unmodified 1351.6983 0.69834526 4752 Q9NYV4 CDK12 Cyclin-dependent kinase 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.431 35.613 2 5.3351E-08 38690 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 127.7 116.06 123530000 0 0 0 8664700 8430800 9025500 9295300 8291900 9510200 11799000 9375400 11973000 13421000 9516500 14230000 42805 4752 38305 356750;356751;356752;356753;356754;356755;356756;356757;356758;356759;356760;356761 282049;282050;282051;282052;282053;282054;282055;282056;282057;282058;282059;282060 282055 8 QSHEPVPDTSVEK Unmodified 1451.6892 0.68923713 5000 Q9ULM3 YEATS2 YEATS domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 24.346 24.205 3 0.0027306 24871 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 54.95 41.271 133700000 0 9087200 0 11871000 13775000 12544000 6395600 6314600 5920500 11460000 11525000 18202000 7438900 6586300 12584000 42806 5000 38306 356762;356763;356764;356765;356766;356767;356768;356769;356770;356771;356772;356773;356774 282061;282062;282063;282064;282065;282066;282067;282068;282069;282070 282066 8 QSHGAAPCSGGSQ Unmodified 1242.5047 0.5047476 1295 P31151;Q86SG5 S100A7;S100A7A Protein S100-A7;Protein S100-A7A yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 5.8853 6.0027 2 0 3460 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 287.83 285.3 218340000 0 0 0 177280000 7274500 4935400 9135000 3317200 3990700 2479400 2309000 2656000 1977500 847100 2135500 42807 1295 38307 356775;356776;356777;356778;356779;356780;356781;356782;356783;356784;356785;356786 282071;282072;282073;282074;282075;282076;282077;282078;282079;282080 282079 10 QSHPATQQQLGK Unmodified 1321.6739 0.67386184 3037 Q76L83 ASXL2 Putative Polycomb group protein ASXL2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 8.1536 8.3092 3 0.042343 6270 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 22.578 14.065 32313000 0 0 0 0 0 2179000 2405900 2727200 3032800 3189900 9974500 0 4438300 4365500 0 42808 3037 38308 356787;356788;356789;356790;356791;356792;356793;356794 282081 282081 1 QSHSESPSLQSK Unmodified 1313.6212 0.62115757 5066 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 9.4692 9.5515 3 0.043506 7798 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 40.767 32.663 59490000 0 0 0 9373100 6420500 4653200 6537700 0 4451400 5394200 0 8819500 7496900 6343900 0 42809 5066 38309 356795;356796;356797;356798;356799;356800;356801;356802;356803 282082 282082 0 QSIAIDDCTFHQCVR Unmodified 1848.8247 0.82470153 3786 Q96CW1 AP2M1 AP-2 complex subunit mu yes yes 0 0 0 By MS/MS 2 0 1 1 61.518 57.748 3 0.014132 71779 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 36.392 29.663 3831600 0 0 3831600 0 0 0 0 0 0 0 0 0 0 0 0 42810 3786 38310 356804 282083 282083 1 QSILPPPQGPAPIPFQHR Unmodified 1979.0741 0.074115002 4423 Q9H6S3 EPS8L2 Epidermal growth factor receptor kinase substrate 8-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.015 79.071 3 2.2729E-05 91298 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 66.965 61.426 64194000 0 0 0 2730500 1897400 10003000 4237600 3357900 5914300 7070500 6151700 7019500 0 4302900 11509000 42811 4423 38311 356805;356806;356807;356808;356809;356810;356811;356812;356813;356814;356815 282084;282085;282086;282087;282088;282089;282090;282091;282092;282093 282085 10 QSINTIESLK Unmodified 1131.6136 0.61355299 419 O60645 EXOC3 Exocyst complex component 3 yes yes 0 0 0 By MS/MS 10 0 1 1 52.017 51.376 2 0.024955 58831 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 59.645 28.416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42812 419 38312 356816 282094 282094 1 QSIPSVLQGEVAR Unmodified 1382.7518 0.75177781 3971 Q96RN5 MED15 Mediator of RNA polymerase II transcription subunit 15 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.985 71.059 2 0.0059165 81826 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 80.763 76.312 76985000 0 0 0 3965000 5936500 6401400 5342000 5482400 3938300 6717700 7678300 10427000 6894600 4534300 9667700 42813 3971 38313 356817;356818;356819;356820;356821;356822;356823;356824;356825;356826;356827;356828 282095;282096;282097 282095 1 QSKPVTTPEEIAQVATISANGDK Unmodified 2383.2231 0.22308324 930 P10809 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 8.25 3.03 1 3 1 1 1 1 76.082 75.348 3 2.3823E-86 86698 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 128.67 120.04 64174000 0 7133600 0 0 0 0 28689000 13971000 0 0 0 0 14381000 0 0 42814 930 38314 356829;356830;356831;356832 282098;282099;282100;282101 282098 3 QSLAQSHLPAQPDISPNIFEAVK Unmodified 2489.2914 0.29143758 189 O14578 CIT Citron Rho-interacting kinase yes yes 0 0 0 By MS/MS 2 0 1 1 91.268 83.137 3 0.009869 107857 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 26.064 20.072 10436000 10436000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42815 189 38315 356833 282102 282102 1 QSLEASLAETEGR Unmodified 1389.6736 0.67358707 72;57 CON__P13645;P13645;CON__P02535-1 KRT10 Keratin, type I cytoskeletal 10 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.64 1.67 3 63 1 1 1 19 5 4 4 5 3 4 3 6 5 3 2 66.334 66.352 2;3 1.1546E-166 62311 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 229.16 210.07 + 43938000000 1554900 911070 440670 14665000000 2409000000 2083500000 3041300000 2956900000 1171500000 3558300000 2868800000 4238300000 3665200000 1904400000 1373400000 42816 72;57 38316 356834;356835;356836;356837;356838;356839;356840;356841;356842;356843;356844;356845;356846;356847;356848;356849;356850;356851;356852;356853;356854;356855;356856;356857;356858;356859;356860;356861;356862;356863;356864;356865;356866;356867;356868;356869;356870;356871;356872;356873;356874;356875;356876;356877;356878;356879;356880;356881;356882;356883;356884;356885;356886;356887;356888;356889;356890;356891;356892;356893;356894;356895;356896;356897;356898;356899 282103;282104;282105;282106;282107;282108;282109;282110;282111;282112;282113;282114;282115;282116;282117;282118;282119;282120;282121;282122;282123;282124;282125;282126;282127;282128;282129;282130;282131;282132;282133;282134;282135;282136;282137;282138;282139;282140;282141;282142;282143;282144;282145;282146;282147;282148;282149;282150;282151;282152;282153;282154;282155;282156;282157;282158;282159;282160;282161;282162;282163;282164;282165;282166;282167;282168;282169;282170;282171;282172;282173;282174;282175;282176;282177;282178;282179;282180;282181;282182;282183;282184;282185;282186;282187;282188;282189;282190;282191;282192;282193;282194;282195;282196;282197;282198;282199;282200;282201;282202;282203;282204;282205;282206 282162 98 QSLEEAAK Unmodified 874.43961 0.43961137 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 13.068 13.222 2 0.012862 12257 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 73.665 18.061 313370000 0 0 0 53686000 16215000 15063000 26839000 50708000 0 26262000 26540000 29010000 29520000 10745000 28777000 42817 1029 38317 356900;356901;356902;356903;356904;356905;356906;356907;356908;356909;356910 282207;282208;282209 282207 3 QSLESLSSGLCK Unmodified 1307.6391 0.63911582 3061 Q7LBC6 KDM3B Lysine-specific demethylase 3B yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 60.364 59.221 2 1.4509E-09 75646 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.57 97.795 110640000 0 64132000 0 0 716450 15516000 0 10185000 0 0 0 20093000 0 0 0 42818 3061 38318 356911;356912;356913;356914;356915;356916 282210;282211;282212;282213;282214 282211 5 QSLEYLEQVR Unmodified 1263.6459 0.64591575 4263 Q9BZE4 GTPBP4 Nucleolar GTP-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 63.431 63.597 2 0.0019251 72139 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 99.653 23.188 66438000 0 0 0 0 3916500 5070200 3893500 4486200 2933900 0 9033400 9678900 10967000 7252100 9206200 42819 4263 38319 356917;356918;356919;356920;356921;356922;356923;356924;356925;356926;356927 282215;282216;282217;282218;282219;282220;282221;282222;282223 282217 9 QSLGELIGTLNAAK Unmodified 1413.7827 0.78274359 1808 P60174 TPI1 Triosephosphate isomerase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 6.68 3.89 7 1 11 2 4 2 1 1 1 2 2 2 2 86.515 85.135 2;3 7.0971E-30 106430 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 205.97 151.78 3226800000 1222300000 1318900000 74175000 7958800 0 0 0 2726400 0 5330200 85028000 82618000 0 48422000 379400000 42820 1808 38320 356928;356929;356930;356931;356932;356933;356934;356935;356936;356937;356938;356939;356940;356941;356942;356943;356944;356945;356946 282224;282225;282226;282227;282228;282229;282230;282231;282232;282233;282234;282235;282236;282237 282224 13 QSLGHGQHGSGSGQSPSPSR Unmodified 1946.8943 0.89431274 104 CON__Q86YZ3;Q86YZ3 HRNR Hornerin yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 6.9652 7.0888 3;4 1.2665E-109 4904 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 182.22 177.74 + 8272500000 0 0 0 544670000 342920000 484550000 228020000 2580600000 314840000 941090000 763530000 500450000 812580000 432780000 326420000 42821 104 38321 356947;356948;356949;356950;356951;356952;356953;356954;356955;356956;356957;356958;356959;356960;356961;356962;356963;356964;356965;356966;356967;356968;356969;356970 282238;282239;282240;282241;282242;282243;282244;282245;282246;282247;282248;282249;282250;282251;282252;282253 282238 15 QSLGHGQHGSGSGQSPSPSRGR Unmodified 2160.0169 0.016887487 104 CON__Q86YZ3;Q86YZ3 HRNR Hornerin yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 29 3 3 3 2 2 1 3 2 3 3 3 1 6.511 6.6128 3;4;5 7.1902E-08 4643 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 58.904 54.551 + 198520000 0 0 0 16624000 11229000 13130000 4757500 11885000 637550 15338000 7078400 68711000 35944000 9485200 3697800 42822 104 38322 356971;356972;356973;356974;356975;356976;356977;356978;356979;356980;356981;356982;356983;356984;356985;356986;356987;356988;356989;356990;356991;356992;356993;356994;356995;356996;356997;356998;356999 282254;282255;282256;282257;282258;282259;282260;282261;282262;282263;282264;282265 282262 10 QSLGHPPPEPGPDR Unmodified 1482.7215 0.72154031 990 P13861 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 28.932 29.081 3 0.00015398 30315 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 64.842 57.477 267600000 0 0 0 19799000 17487000 21994000 17468000 15314000 11717000 38838000 21293000 0 31272000 16994000 55422000 42823 990 38323 357000;357001;357002;357003;357004;357005;357006;357007;357008;357009;357010 282266;282267;282268;282269;282270;282271;282272;282273;282274;282275;282276;282277;282278 282275 13 QSLIDWNNPAIINK Unmodified 1624.8573 0.85730551 2828 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 83.11 82.574 2 5.9889E-77 101992 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 266.26 248.79 129580000 0 70950000 0 0 4746000 4521700 0 0 0 6483700 9629700 10507000 0 5459200 17279000 42824 2828 38324 357011;357012;357013;357014;357015;357016;357017;357018 282279;282280;282281;282282;282283;282284;282285 282282 7 QSLLPINR Unmodified 939.55016 0.55016488 2738 Q5JTD0 TJAP1 Tight junction-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 57.618 57.978 2 0.049796 66351 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 46.994 15.69 13326000 0 0 0 0 0 0 3081800 0 0 0 0 0 0 0 10244000 42825 2738 38325 357019;357020 282286 282286 1 QSLLTAIR Unmodified 900.53927 0.53926584 2708 Q53SF7 COBLL1 Cordon-bleu protein-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.179 61.281 2 0.016944 69800 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 66.457 42.254 91443000 0 0 0 5867000 5159900 7459800 6393400 7087000 5345200 8100800 9591300 10616000 7481700 6359800 11982000 42826 2708 38326 357021;357022;357023;357024;357025;357026;357027;357028;357029;357030;357031;357032 282287;282288 282287 2 QSLPATSIPTPASFK Unmodified 1543.8246 0.8246084 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.814 77.871 2 4.0925E-14 90256 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 117.23 89.751 174770000 0 0 0 9301400 10655000 13726000 12389000 18442000 9074500 18191000 16989000 19410000 13085000 13215000 20296000 42827 1601 38327 357033;357034;357035;357036;357037;357038;357039;357040;357041;357042;357043;357044 282289;282290;282291;282292;282293;282294;282295;282296;282297;282298;282299;282300;282301 282298 13 QSLPPGLAVK Unmodified 1008.5968 0.59678072 1945 P63173 RPL38 60S ribosomal protein L38 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56.11 55.019 2 0.0014466 62464 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 91.069 78.712 2280000000 28308000 665420000 5501900 106820000 121970000 135680000 105750000 105200000 86483000 142080000 182870000 185670000 142440000 106800000 158980000 42828 1945 38328 357045;357046;357047;357048;357049;357050;357051;357052;357053;357054;357055;357056;357057;357058;357059 282302;282303;282304;282305;282306;282307;282308;282309;282310;282311;282312;282313;282314;282315;282316;282317;282318;282319;282320;282321;282322;282323;282324;282325;282326;282327;282328;282329;282330;282331;282332;282333;282334;282335;282336;282337;282338;282339;282340;282341;282342;282343;282344 282308 43 QSLQQCGEEGQSAHR Unmodified 1713.7489 0.74889405 3008 Q6ZS17 FAM65A Protein FAM65A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 13.294 13.48 3 0.00081534 12692 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 56.514 50.077 41406000 0 0 0 2056100 0 4984000 2719500 2547200 1168900 3713400 3023500 6627800 4217300 3927200 6421000 42829 3008 38329 357060;357061;357062;357063;357064;357065;357066;357067;357068;357069;357070 282345;282346;282347;282348;282349 282345 5 QSLSFSTCGK Unmodified 1113.5125 0.51245874 624 O95163 IKBKAP Elongator complex protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 42.81 37.849 2 0.04737 49026 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.282 58.373 80264000 0 80264000 0 0 0 0 0 0 0 0 0 0 0 0 0 42830 624 38330 357071;357072 282350 282350 0 QSLSHMLSAK Unmodified 1100.5648 0.56482866 1720 P53618 COPB1 Coatomer subunit beta yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 38.022 38.11 2 0.015017 41180 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 50.353 32.968 34201000 0 0 0 1883000 1981900 4438900 2052800 0 1988400 4459700 0 0 5862900 2977800 8555500 42831 1720 38331 357073;357074;357075;357076;357077;357078;357079;357080;357081 282351;282352;282353 282352 3 QSLSPMSQRPVLK Unmodified 1469.8024 0.80243317 4630 Q9NSV4 DIAPH3 Protein diaphanous homolog 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.552 48.712 3 0.0019508 54699 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 43.761 29.2 317510000 0 0 0 13537000 19868000 28998000 18754000 25578000 18107000 35315000 35503000 38284000 26350000 22886000 34326000 42832 4630 38332 357082;357083;357084;357085;357086;357087;357088;357089;357090;357091;357092;357093 282354;282355;282356;282357;282358;282359;282360;282361;282362;282363;282364;282365;282366 282359 13 QSLTMDPVVK Oxidation (M) 1132.5798 0.57981002 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 41.724 35.83 2 0.0034993 46609 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.584 55.704 178290000 11392000 166900000 0 0 0 0 0 0 0 0 0 0 0 0 0 42833 1337 38333 357094;357095 282367;282368 282367 2019 2 QSLTMDPVVK Unmodified 1116.5849 0.5848954 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.5 2.93 4 1 1 1 3 1 1 57.766 53.107 1;2 0.006421 68597 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.07 69.227 1257600000 24743000 1116900000 6045000 0 0 0 0 0 0 0 0 0 0 0 109900000 42834 1337 38333 357096;357097;357098;357099;357100;357101 282369;282370;282371;282372;282373 282370 1 QSMESERADR Unmodified 1207.5251 0.52514869 4791 Q9P0J7 KCMF1 E3 ubiquitin-protein ligase KCMF1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 6.5281 6.6636 3 0.014156 4050 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.589 15.735 22965000 0 0 0 0 1364400 2176500 2078400 0 2078800 2824200 3870400 0 3978000 0 4594300 42835 4791 38334 357102;357103;357104;357105;357106;357107;357108;357109 282374;282375 282374 2 QSMISTQNQYSTLSK Oxidation (M) 1730.8145 0.814514 2604 Q16513 PKN2 Serine/threonine-protein kinase N2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 16 1 2 2 1 1 1 2 2 1 1 2 39.36 39.544 2 1.8111E-12 43457 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 103.44 87.9 67659000 0 0 0 4693200 7119900 9112500 3355600 0 2421100 5705400 12871000 4091100 4975900 3520800 9791900 42836 2604 38335 357110;357111;357112;357113;357114;357115;357116;357117;357118;357119;357120;357121;357122;357123;357124;357125 282376;282377;282378;282379;282380;282381;282382;282383 282381 4248 8 QSMISTQNQYSTLSK Unmodified 1714.8196 0.81959938 2604 Q16513 PKN2 Serine/threonine-protein kinase N2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 50.65 50.741 2 1.2315E-18 56292 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 111.63 96.757 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42837 2604 38335 357126;357127 282384;282385 282384 2 QSMVNSLPTFPTDIK Oxidation (M) 1692.8393 0.83927219 3662 Q92793 CREBBP CREB-binding protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 78.789 78.48 2 4.2117E-20 90756 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 112.43 93.65 136630000 0 20786000 0 9357500 8222700 8814300 8873600 9389100 6796000 11446000 9788700 11346000 7186900 8033900 16592000 42838 3662 38336 357128;357129;357130;357131;357132;357133;357134;357135;357136;357137;357138;357139;357140 282386;282387;282388;282389;282390;282391;282392;282393;282394;282395;282396;282397;282398 282387 5189 13 QSMVNSLPTFPTDIK Unmodified 1676.8444 0.84435757 3662 Q92793 CREBBP CREB-binding protein yes yes 0 0 0 By MS/MS 2 0 1 1 88.1 83.258 2 6.6748E-05 103492 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 132.03 117.87 57469000 0 57469000 0 0 0 0 0 0 0 0 0 0 0 0 0 42839 3662 38336 357141 282399 282399 1 QSNASSDVEVEEK Unmodified 1420.6318 0.63178183 505 O75475 PSIP1 PC4 and SFRS1-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.31 2.4 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 26.056 26.642 2 5.2118E-12 19851 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 123.67 113.15 377700000 11283000 0 0 27749000 21572000 25906000 29670000 22608000 20340000 35820000 39708000 43439000 32947000 26629000 40028000 42840 505 38337 357142;357143;357144;357145;357146;357147;357148;357149;357150;357151;357152;357153;357154 282400;282401;282402;282403;282404;282405;282406;282407;282408;282409;282410 282406 10 QSNNEANLREEVLK Unmodified 1642.8275 0.82746195 3549 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 43.692 43.369 3 0.00071538 48241 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 61.409 38.418 351120000 0 52132000 0 17081000 12529000 26894000 25666000 25190000 18978000 41502000 48248000 31894000 14044000 0 36959000 42841 3549 38338 357155;357156;357157;357158;357159;357160;357161;357162;357163;357164;357165;357166 282411;282412;282413;282414;282415;282416;282417;282418;282419;282420 282414 10 QSNPLLIHVDTK Unmodified 1363.746 0.74596415 1533 P48147 PREP Prolyl endopeptidase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6 4 5 5 2 1 2 1 1 1 1 1 62.758 59.863 2;3 0.0010315 81815 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.79 89.38 401020000 242060000 72456000 47691000 4253300 0 0 0 0 0 0 7886800 3436400 0 3011700 20229000 42842 1533 38339 357167;357168;357169;357170;357171;357172;357173;357174;357175;357176 282421;282422;282423;282424;282425 282424 5 QSNVAAPGDATPPAEK Unmodified 1551.7529 0.75290002 3955 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.318 30.494 2 0.00018155 32728 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 90.975 79.11 77573000 0 0 0 4782900 5510500 5311300 5867700 5405100 4180900 7358800 6487600 12702000 0 9797100 10169000 42843 3955 38340 357177;357178;357179;357180;357181;357182;357183;357184;357185;357186;357187;357188 282426;282427;282428;282429;282430;282431;282432;282433;282434;282435 282433 10 QSPASPERDYSPYYK Unmodified 1786.8162 0.81622856 73;981 CON__P13646-1;P13646;CON__ENSEMBL:ENSP00000377550 KRT13 Keratin, type I cytoskeletal 13 no no 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 2 2 1 2 2 40.004 40.264 2;3 8.1991E-06 44514 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 79.771 69.113 + 688370000 0 0 0 11233000 0 0 185750000 302880000 0 0 10575000 78676000 99263000 0 0 42844 73;981 38341 357189;357190;357191;357192;357193;357194;357195;357196;357197;357198 282436;282437;282438;282439;282440 282436 5 QSPASPPPLGGGAPVR Unmodified 1486.7892 0.78922595 2381 Q14160 SCRIB Protein scribble homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 51.39 51.737 2 0.013184 57800 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 35.204 18.533 56497000 0 0 0 0 0 0 4747100 0 5128200 8520900 9774400 12029000 0 6429800 9867200 42845 2381 38342 357199;357200;357201;357202;357203;357204;357205 282441;282442 282442 2 QSPLTYEDHGAPFAGHLPR Unmodified 2092.0126 0.012636957 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 67.948 68.009 4 0.0007549 77113 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.587 40.06 48958000 0 0 0 754210 0 10745000 0 8237200 7896700 0 0 0 0 6845800 14479000 42846 5262 38343 357206;357207;357208;357209;357210;357211 282443;282444;282445 282444 3 QSPPISTSK Unmodified 943.49746 0.4974606 1331 P33981 TTK Dual specificity protein kinase TTK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.836 16.006 2 0.03094 15743 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 47.96 35.766 219380000 0 0 0 10401000 11753000 12858000 13072000 13039000 11324000 21006000 26359000 27403000 22606000 23601000 25958000 42847 1331 38344 357212;357213;357214;357215;357216;357217;357218;357219;357220;357221;357222;357223 282446 282446 1 QSPSYGR Unmodified 793.37187 0.37186616 104 CON__Q86YZ3;Q86YZ3 HRNR Hornerin yes no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching 10 0 7 1 1 1 1 1 1 1 7.2315 7.2718 2 0.026157 5245 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 79.307 51.133 + 130530000 0 0 0 14196000 12077000 18939000 10492000 60563000 9068700 0 0 0 5196300 0 0 42848 104 38345 357224;357225;357226;357227;357228;357229;357230 282447;282448;282449;282450 282449 4 QSPSYGRHGSGSGR Unmodified 1431.6603 0.66033704 104 CON__Q86YZ3;Q86YZ3 HRNR Hornerin yes no 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 5.6036 5.6884 3 0.0019258 3601 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.887 56.485 + 30422000 0 0 0 4659200 3962300 0 0 3435200 2299300 0 0 7817800 6970100 1278400 0 42849 104 38346 357231;357232;357233;357234;357235;357236;357237 282451;282452 282452 1 QSPTLQRNALYIK Unmodified 1530.8518 0.85182621 1741 P54578 USP14 Ubiquitin carboxyl-terminal hydrolase 14 yes yes 0 0 1 By MS/MS 2 0 1 1 61.829 53.574 3 0.040226 72538 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.069 33.236 105160000 105160000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42850 1741 38347 357238 282453 282453 0 QSQADYETR Unmodified 1096.4785 0.47851608 4534 Q9NP61 ARFGAP3 ADP-ribosylation factor GTPase-activating protein 3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 9.4338 9.5622 2 0.0047973 6827 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 85.67 45.402 41058000 0 0 0 4207700 2662200 3897700 4440900 3131800 2646600 2663400 6785300 4279200 0 2392300 3950800 42851 4534 38348 357239;357240;357241;357242;357243;357244;357245;357246;357247;357248;357249 282454;282455;282456;282457;282458;282459;282460;282461 282457 8 QSQDEPLR Unmodified 971.46722 0.46722311 2242 Q13148 TARDBP TAR DNA-binding protein 43 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.051 13.207 2 0.0043249 12394 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 111.82 82.44 496290000 0 0 0 28638000 21590000 30935000 32539000 29015000 21997000 68278000 64260000 39763000 53328000 33201000 72745000 42852 2242 38349 357250;357251;357252;357253;357254;357255;357256;357257;357258;357259;357260;357261 282462;282463;282464;282465;282466;282467;282468;282469;282470;282471;282472;282473 282463 10 QSQDEPLRSR Unmodified 1214.6004 0.60036255 2242 Q13148 TARDBP TAR DNA-binding protein 43 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 10.577 10.644 3 0.005524 8348 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 61.65 32.177 40511000 0 0 0 6319200 361940 0 8981500 4331800 0 6603800 0 0 7098400 6814200 0 42853 2242 38350 357262;357263;357264;357265;357266;357267;357268 282474;282475;282476;282477;282478;282479;282480 282479 6 QSQIQVFEDGADTTSPETPDSSASK Unmodified 2624.1726 0.17256381 2391 Q14203 DCTN1 Dynactin subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 66.306 66.333 3 1.4237E-93 76216 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 126.45 122.1 50186000 0 0 0 5276600 3983700 0 0 5944600 0 7014700 4734300 9193600 7176400 6862000 0 42854 2391 38351 357269;357270;357271;357272;357273;357274;357275;357276 282481;282482;282483;282484;282485;282486;282487;282488;282489 282482 8 QSQLAQDER Unmodified 1073.5102 0.51015055 623 O95155 UBE4B Ubiquitin conjugation factor E4 B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 2 1 1 2 1 1 1 2 9.7868 9.9732 2 0.013868 7977 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.153 36.11 20602000 0 0 0 1107600 0 2700100 1750200 0 1215700 1892400 4279900 1677300 1165800 1339100 3473500 42855 623 38352 357277;357278;357279;357280;357281;357282;357283;357284;357285;357286;357287;357288;357289 282490;282491 282490 2 QSQLVQEK Unmodified 958.50836 0.50835964 1409 P40222 TXLNA Alpha-taxilin yes yes 0 0 0 By MS/MS 2 0 1 1 15.038 11.698 2 0.026102 15606 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.596 24.985 55820000 0 55820000 0 0 0 0 0 0 0 0 0 0 0 0 0 42856 1409 38353 357290 282492 282492 1 QSQQQYDPSTGPPVQNAASLHTPLPQLPGR Unmodified 3211.601 0.60103783 3915 Q96L91 EP400 E1A-binding protein p400 yes yes 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 78.85 79.025 3 6.6433E-08 91321 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 36.483 34.372 19305000 0 0 0 0 0 0 0 0 0 0 8216200 0 4039900 0 7049200 42857 3915 38354 357291;357292;357293 282493 282493 1 QSQTTSIASEDPLQNLCLASQEVLQK Unmodified 2887.4233 0.42331597 3344 Q8N5C7 DTWD1 DTW domain-containing protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 95.797 91.758 3 2.4215E-67 113678 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.019 91.515 29720000 0 29720000 0 0 0 0 0 0 0 0 0 0 0 0 0 42858 3344 38355 357294;357295 282494;282495;282496 282495 3 QSRDISTLNSGK Unmodified 1304.6684 0.66844211 788 P04843 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 0 0 1 By MS/MS 2 0 1 1 21.612 16.793 3 0.0049867 24160 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.643 37.11 7206800 7206800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42859 788 38356 357296 282497 282497 1 QSRGEPPLPEEDLSK Unmodified 1680.8319 0.83187862 279 O15372 EIF3H Eukaryotic translation initiation factor 3 subunit H yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.374 46.541 3 0.00015996 51328 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 51.591 39.231 225850000 0 0 0 10861000 11511000 15625000 14881000 12702000 13498000 24731000 26394000 28671000 21613000 18644000 26724000 42860 279 38357 357297;357298;357299;357300;357301;357302;357303;357304;357305;357306;357307;357308 282498;282499;282500;282501;282502;282503;282504;282505;282506;282507;282508;282509;282510;282511 282506 11 QSSAVSTSGNLNGGIAAGSSGK Unmodified 1948.945 0.9450109 4846 Q9UBL3 ASH2L Set1/Ash2 histone methyltransferase complex subunit ASH2 yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 40.464 40.735 2 4.6476E-66 44379 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 119.56 105.65 36090000 0 0 0 0 2045400 2366600 0 0 3278700 4047400 5459600 5861800 3933000 3881800 5215600 42861 4846 38358 357309;357310;357311;357312;357313;357314;357315;357316;357317 282512;282513;282514;282515;282516 282513 5 QSSFALLGDLTK Unmodified 1278.682 0.68196691 3692;215 Q92973;O14787 TNPO1;TNPO2 Transportin-1;Transportin-2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 84.932 84.987 2 0.00059833 97530 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 95.618 58.11 335310000 0 0 0 11326000 19843000 58620000 23099000 35265000 23919000 42238000 35904000 34926000 21851000 28316000 0 42862 3692;215 38359 357318;357319;357320;357321;357322;357323;357324;357325;357326;357327;357328 282517;282518;282519;282520;282521;282522;282523;282524;282525;282526;282527;282528;282529;282530 282524 13 QSSGASSSSFSSSR Unmodified 1360.5855 0.58550034 170 O00571 DDX3X ATP-dependent RNA helicase DDX3X yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.599 12.753 2 1.0096E-19 11579 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 138.45 134.53 281850000 0 0 0 22031000 21726000 22467000 21708000 18289000 14844000 30516000 22308000 30600000 31446000 19588000 26322000 42863 170 38360 357329;357330;357331;357332;357333;357334;357335;357336;357337;357338;357339;357340 282531;282532;282533;282534;282535;282536;282537;282538;282539;282540;282541;282542;282543 282535 13 QSSGSATNVASTPDNR Unmodified 1590.7234 0.72339081 3094 Q7Z460 CLASP1 CLIP-associating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 16.508 16.656 2 6.6376E-05 16293 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 92.925 72.085 40452000 0 0 0 3263200 2487400 3455000 3556900 3155500 2071900 4503400 4397400 7266500 2693700 3601600 0 42864 3094 38361 357341;357342;357343;357344;357345;357346;357347;357348;357349;357350;357351 282544;282545;282546;282547;282548;282549;282550;282551;282552;282553 282550 10 QSSLTFQSSDPEQMR Unmodified 1739.7785 0.77846285 2708 Q53SF7 COBLL1 Cordon-bleu protein-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 55.883 55.937 2 0.0026301 63509 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 60.49 40.728 28151000 0 0 0 2566600 1982300 3052100 2503100 3008000 0 3080300 5142100 4456300 0 2360200 0 42865 2708 38362 357352;357353;357354;357355;357356;357357;357358;357359;357360 282554;282555;282556;282557;282558 282556 5 QSSMTVMEAQESPLFNNVK Oxidation (M) 2154.9926 0.99255472 4108 Q9BRG1 VPS25 Vacuolar protein-sorting-associated protein 25 yes yes 0 1 0 By MS/MS 2.33 0.471 4 2 6 78.556 74.259 2;3 1.4633E-72 92920 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 159.66 145.3 130750000 0 130750000 0 0 0 0 0 0 0 0 0 0 0 0 0 42866 4108 38363 357361;357362;357363;357364;357365;357366 282559;282560;282561;282562 282562 5604;5605 4 QSSMTVMEAQESPLFNNVK Unmodified 2138.9976 0.9976401 4108 Q9BRG1 VPS25 Vacuolar protein-sorting-associated protein 25 yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 84.134 79.888 2;3 1.4752E-95 99268 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 190.85 169.22 239620000 0 239620000 0 0 0 0 0 0 0 0 0 0 0 0 0 42867 4108 38363 357367;357368;357369 282563;282564;282565 282563 2 QSSQLDEDRTEAANR Unmodified 1718.782 0.78196832 2269 Q13315 ATM Serine-protein kinase ATM yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 16.777 16.956 3 0.036823 16961 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 27.649 16.378 22503000 0 0 0 0 3381700 3155100 1946300 0 2254500 3471300 2376200 0 1887600 1908900 2121700 42868 2269 38364 357370;357371;357372;357373;357374;357375;357376;357377;357378 282566;282567 282567 2 QSSQPAETDSMSLSEK Unmodified 1723.7571 0.7570587 3182 Q86WB0 ZC3HC1 Nuclear-interacting partner of ALK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.07 37.251 2 2.1622E-20 40975 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 125.28 119.68 73004000 0 0 0 3326900 3693400 7419100 6129300 4187200 3062500 9121600 7197500 8960200 5181300 6942900 7782500 42869 3182 38365 357379;357380;357381;357382;357383;357384;357385;357386;357387;357388;357389;357390 282568;282569;282570;282571;282572;282573;282574;282575;282576;282577;282578;282579 282573 12 QSSQPAETDSMSLSEK Oxidation (M) 1739.752 0.75197332 3182 Q86WB0 ZC3HC1 Nuclear-interacting partner of ALK yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 22.999 23.265 2 0.00038307 23127 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 61.435 57.548 31922000 0 0 0 0 3018500 5414700 0 0 2029800 3879900 4784800 4666500 0 3076200 5051700 42870 3182 38365 357391;357392;357393;357394;357395;357396;357397;357398 282580;282581;282582;282583;282584;282585 282583 4808 6 QSSSSAGDSDGEREDSAAER Unmodified 2039.8264 0.82641191 4105 Q9BRA0 NAA38 N-alpha-acetyltransferase 38, NatC auxiliary subunit yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 7.2903 7.514 3 1.3796E-05 5351 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 60.564 57.277 10446000 0 0 0 0 0 0 0 0 0 0 4795300 5650600 0 0 0 42871 4105 38366 357399;357400 282586;282587 282586 2 QSSSSRDDNMFQIGK Unmodified 1698.7631 0.76314713 1730 P53999 SUB1 Activated RNA polymerase II transcriptional coactivator p15 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 3 24 1 1 1 2 2 2 2 2 2 2 2 2 2 2 2 46.949 46.437 2;3 2.2288E-25 51291 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 143 119.01 3143800000 86453000 260160000 7538700 155760000 181060000 141260000 217720000 312330000 159110000 208930000 341550000 258630000 243220000 204160000 365860000 42872 1730 38367 357401;357402;357403;357404;357405;357406;357407;357408;357409;357410;357411;357412;357413;357414;357415;357416;357417;357418;357419;357420;357421;357422;357423;357424;357425;357426;357427 282588;282589;282590;282591;282592;282593;282594;282595;282596;282597;282598;282599;282600;282601;282602;282603;282604;282605;282606;282607 282605 20 QSSSSRDDNMFQIGK Oxidation (M) 1714.7581 0.75806175 1730 P53999 SUB1 Activated RNA polymerase II transcriptional coactivator p15 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.8 3.94 7 1 7 3 4 1 1 1 1 1 1 2 33.322 30.934 2;3 1.6003E-14 40382 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.45 110.34 1073300000 153670000 219110000 106230000 72741000 76762000 81655000 145550000 0 0 0 123480000 0 0 0 94059000 42873 1730 38367 357428;357429;357430;357431;357432;357433;357434;357435;357436;357437;357438;357439;357440;357441;357442 282608;282609;282610;282611;282612;282613;282614;282615;282616;282617;282618;282619;282620 282610 2807 8 QSSSTNYTNELK Unmodified 1370.6314 0.6313879 4893 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.149 31.338 2 0.0091151 34271 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 60.691 36.459 196590000 0 0 0 8861300 13456000 11998000 18362000 11521000 10894000 18439000 21682000 31080000 18792000 12974000 18531000 42874 4893 38368 357443;357444;357445;357446;357447;357448;357449;357450;357451;357452;357453;357454 282621;282622;282623 282621 3 QSSSYGPHGYGSGR Unmodified 1438.6226 0.62255455 104 CON__Q86YZ3;Q86YZ3 HRNR Hornerin yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 16.238 16.414 2;3 2.1831E-05 16640 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 71.692 63.967 + 760500000 0 0 0 72121000 45007000 50487000 29089000 163100000 32621000 73616000 58791000 58355000 99605000 40665000 37042000 42875 104 38369 357455;357456;357457;357458;357459;357460;357461;357462;357463;357464;357465;357466;357467;357468;357469;357470;357471;357472;357473;357474;357475;357476;357477;357478 282624;282625;282626;282627;282628;282629;282630;282631;282632;282633;282634;282635;282636;282637;282638 282638 5 QSSSYGQHESASR Unmodified 1422.6124 0.61238379 104 CON__Q86YZ3;Q86YZ3 HRNR Hornerin yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.1527 6.2705 3 2.9707E-08 4042 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 103.85 93.243 + 331860000 0 0 0 37684000 20214000 20727000 17664000 93263000 15351000 19587000 23928000 29353000 31801000 13814000 8470100 42876 104 38370 357479;357480;357481;357482;357483;357484;357485;357486;357487;357488;357489;357490 282639;282640;282641;282642;282643;282644;282645;282646;282647;282648;282649;282650;282651 282646 13 QSSTPGSLFLSPPAPAPK Unmodified 1780.9359 0.93594977 4393 Q9H4A3 WNK1 Serine/threonine-protein kinase WNK1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 2 14 1 1 1 1 1 1 1 1 1 1 1 2 1 2 80.761 80.017 2;3 2.912E-42 91650 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 173.25 173.25 534150000 10650000 45578000 0 28937000 26046000 34481000 34669000 31650000 29646000 45409000 47616000 59161000 45349000 42471000 52488000 42877 4393 38371 357491;357492;357493;357494;357495;357496;357497;357498;357499;357500;357501;357502;357503;357504;357505;357506 282652;282653;282654;282655;282656;282657;282658;282659;282660;282661;282662;282663;282664;282665;282666;282667;282668;282669 282653 18 QSSVLERDNR Unmodified 1202.6004 0.60036255 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 12.153 12.309 3 0.022578 10978 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 63.283 47.394 137560000 0 0 0 0 9062900 16633000 11130000 6993300 10236000 17683000 15647000 0 14378000 12196000 23604000 42878 965 38372 357507;357508;357509;357510;357511;357512;357513;357514;357515;357516 282670;282671;282672 282671 1 QSSVTQVTEQSPK Unmodified 1417.7049 0.7048872 2456 Q14966 ZNF638 Zinc finger protein 638 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.225 27.423 2 0.00058284 29715 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 90.685 72.821 105990000 0 0 0 5736300 7929900 7205800 8263200 6942700 7563000 8492200 11479000 11282000 11467000 9176200 10449000 42879 2456 38373 357517;357518;357519;357520;357521;357522;357523;357524;357525;357526;357527;357528 282673;282674;282675;282676;282677;282678;282679;282680;282681;282682;282683;282684 282674 12 QSSYGQHGSGSSQSSGYGQYGSR Unmodified 2350.9799 0.97989286 95 CON__Q5D862;Q5D862 FLG2 Filaggrin-2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 22.058 22.164 3 5.9076E-11 23107 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 70.569 67.516 + 273850000 0 0 0 37212000 13804000 20206000 42713000 48506000 15929000 0 0 44047000 51438000 0 0 42880 95 38374 357529;357530;357531;357532;357533;357534;357535;357536 282685;282686;282687;282688;282689;282690;282691;282692 282685 8 QSSYSQQPYNNQGQQQNMESSGSQGGR Unmodified 2974.2496 0.24960213 3664 Q92804 TAF15 TATA-binding protein-associated factor 2N yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 31.757 31.776 3 3.4532E-31 33936 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.035 61.752 37657000 0 0 0 5138900 5115600 5657500 6282300 3929200 0 0 0 0 0 0 11533000 42881 3664 38375 357537;357538;357539;357540;357541;357542;357543 282693;282694;282695;282696;282697;282698;282699 282695 7 QSTGSAPQGPAYHGVNR Unmodified 1725.8183 0.81829425 183 O14497 ARID1A AT-rich interactive domain-containing protein 1A yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 23.94 24.39 3 0.017346 24964 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 24.481 19.269 13209000 0 0 0 0 0 0 0 0 0 0 0 0 4275700 3652900 5280700 42882 183 38376 357544;357545;357546 282700 282700 1 QSTIVCHNR Unmodified 1113.5349 0.53492552 2608 Q16531 DDB1 DNA damage-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 7.5184 7.7862 2 0.016625 5063 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.378 40.497 3751600 0 0 0 0 0 0 0 0 0 0 0 1373900 0 0 2377700 42883 2608 38377 357547;357548 282701 282701 1 QSTIVCHNRVDPNGSR Unmodified 1838.8806 0.88057693 2608 Q16531 DDB1 DNA damage-binding protein 1 yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 19.18 19.786 3 0.0042352 19089 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.995 13.671 11562000 0 0 0 0 0 0 0 0 0 0 0 5454200 0 0 6107800 42884 2608 38378 357549;357550 282702 282702 1 QSTLYSFFPK Unmodified 1216.6128 0.61282471 1694 P52701 MSH6 DNA mismatch repair protein Msh6 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 81.768 81.817 2 0.0026435 94308 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.547 59.952 154650000 0 0 0 7230600 8248600 15320000 10287000 13222000 11341000 18530000 0 17264000 9453900 10851000 32906000 42885 1694 38379 357551;357552;357553;357554;357555;357556;357557;357558;357559;357560;357561 282703;282704;282705;282706;282707 282704 4 QSTQVMAASMSAFDPLK 2 Oxidation (M) 1842.8492 0.84918495 3654 Q92734 TFG Protein TFG yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.33 2 2 11 2 2 1 1 1 1 1 1 1 1 1 1 1 68.107 67.08 2 4.061E-46 84974 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 137.62 130.34 270210000 675390 157820000 0 4299400 5771700 5624700 8076700 5005600 0 10628000 18244000 20801000 7793500 10547000 14930000 42886 3654 38380 357562;357563;357564;357565;357566;357567;357568;357569;357570;357571;357572;357573;357574;357575;357576 282708;282709;282710;282711;282712;282713;282714;282715;282716;282717;282718;282719;282720 282712 5171;5172 13 QSTQVMAASMSAFDPLK Oxidation (M) 1826.8543 0.85427033 3654 Q92734 TFG Protein TFG yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 76.32 75.953 2 2.7649E-132 93832 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 226.54 202.39 377970000 0 325370000 0 0 0 0 2411700 2175300 0 6192200 7975700 9038700 3109900 7371500 14330000 42887 3654 38380 357577;357578;357579;357580;357581;357582;357583;357584;357585 282721;282722;282723;282724;282725 282722 5171;5172 5 QSTQVMAASMSAFDPLK Unmodified 1810.8594 0.8593557 3654 Q92734 TFG Protein TFG yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.75 3.85 4 1 7 1 3 1 1 1 1 1 1 2 86.436 85.49 2;3 4.6112E-80 106372 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 190.27 157.18 964520000 0 903260000 2916800 0 0 0 0 3097500 0 4417500 5313000 8670600 0 3974500 32876000 42888 3654 38380 357586;357587;357588;357589;357590;357591;357592;357593;357594;357595;357596;357597 282726;282727;282728;282729;282730;282731;282732;282733;282734;282735;282736;282737 282727 12 QSTSFLVLQEILESEEK Unmodified 1979.0099 0.0099025694 119 O00151 PDLIM1 PDZ and LIM domain protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 2 3 1 99.3 94.865 2 0 117208 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 297.74 273.51 103040000 12795000 82178000 8065100 0 0 0 0 0 0 0 0 0 0 0 0 42889 119 38381 357598;357599;357600;357601;357602;357603 282738;282739;282740;282741;282742;282743 282738 5 QSTSSQEASSASEPR Unmodified 1550.6809 0.68085729 457 O75128 COBL Protein cordon-bleu yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 9.4615 9.5946 2 1.0496E-26 6379 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 126.76 108.02 36947000 0 0 0 1840600 1678900 2429800 3298100 2437600 1920900 2060100 7102400 5372600 3227300 1917900 3660400 42890 457 38382 357604;357605;357606;357607;357608;357609;357610;357611;357612;357613;357614;357615 282744;282745;282746;282747;282748;282749;282750;282751;282752;282753;282754 282749 11 QSTVLAPVIDLK Unmodified 1282.7497 0.74965254 3874 Q96I25 RBM17 Splicing factor 45 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 81.844 81.195 2 0.00092555 101342 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.767 83.277 542930000 0 264210000 2997200 11002000 21811000 16487000 23991000 19894000 15213000 25561000 34033000 34796000 19655000 20626000 32653000 42891 3874 38383 357616;357617;357618;357619;357620;357621;357622;357623;357624;357625;357626;357627;357628;357629;357630 282755;282756;282757;282758;282759;282760;282761;282762;282763;282764;282765;282766;282767;282768 282758 13 QSTWEKPDDLK Unmodified 1345.6514 0.65139506 494 O75400 PRPF40A Pre-mRNA-processing factor 40 homolog A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 35.478 35.66 2;3 0.00051729 38900 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 130.98 77.015 1310500000 0 0 0 64471000 61571000 63500000 121830000 81653000 101180000 94394000 112470000 112400000 150000000 103870000 243170000 42892 494 38384 357631;357632;357633;357634;357635;357636;357637;357638;357639;357640;357641;357642;357643;357644;357645;357646;357647;357648;357649;357650;357651;357652;357653;357654 282769;282770;282771;282772;282773;282774;282775;282776;282777;282778;282779;282780 282776 8 QSVDNVTNPEK Unmodified 1229.5888 0.58879481 5050 Q9UPN6 SCAF8 Protein SCAF8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.168 21.405 2 2.8386E-05 21008 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 119.22 90.142 362690000 0 0 0 0 23866000 40620000 31262000 21652000 25789000 35136000 37594000 46212000 38479000 30622000 31459000 42893 5050 38385 357655;357656;357657;357658;357659;357660;357661;357662;357663;357664;357665;357666 282781;282782;282783;282784;282785;282786;282787;282788;282789;282790;282791;282792 282784 11 QSVEADINGLR Unmodified 1200.6099 0.6098646 72;73;981;57 CON__P13645;P13645;CON__Q2M2I5;Q2M2I5;CON__P02535-1;CON__P13646-1;P13646;CON__ENSEMBL:ENSP00000377550 KRT10;KRT24;KRT13 Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 24;Keratin, type I cytoskeletal 13 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 14 2 1 2 1 1 1 1 1 1 1 1 1 53.681 53.813 2 2.4312E-47 61687 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 186.41 137.61 + 4230200000 0 0 0 1170700000 274640000 284310000 253120000 448980000 197000000 302960000 181730000 529900000 303150000 149670000 134030000 42894 72;57;73;981 38386 357667;357668;357669;357670;357671;357672;357673;357674;357675;357676;357677;357678;357679;357680 282793;282794;282795;282796;282797;282798;282799;282800;282801;282802;282803;282804;282805;282806;282807;282808;282809;282810;282811;282812;282813;282814;282815;282816;282817;282818;282819 282815 27 QSVEADINGLRR Unmodified 1356.711 0.71097563 72;73;981;57 CON__P13645;P13645;CON__P02535-1;CON__P13646-1;P13646;CON__ENSEMBL:ENSP00000377550 KRT10;KRT13 Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 13 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.43 2.06 4 52 2 1 1 4 5 5 4 4 5 8 4 4 3 2 4 47.188 47.172 2;3 3.7084E-156 53050 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 264.9 217.03 + 74923000000 8097700 2394300 617070 12583000000 4186200000 6421700000 4936600000 7558500000 4593700000 7553100000 4869900000 9499800000 6112500000 2920400000 3676700000 42895 72;57;73;981 38387 357681;357682;357683;357684;357685;357686;357687;357688;357689;357690;357691;357692;357693;357694;357695;357696;357697;357698;357699;357700;357701;357702;357703;357704;357705;357706;357707;357708;357709;357710;357711;357712;357713;357714;357715;357716;357717;357718;357719;357720;357721;357722;357723;357724;357725;357726;357727;357728;357729;357730;357731;357732;357733;357734;357735;357736 282820;282821;282822;282823;282824;282825;282826;282827;282828;282829;282830;282831;282832;282833;282834;282835;282836;282837;282838;282839;282840;282841;282842;282843;282844;282845;282846;282847;282848;282849;282850;282851;282852;282853;282854;282855;282856;282857;282858;282859;282860;282861;282862;282863;282864;282865;282866;282867;282868;282869;282870;282871;282872;282873;282874;282875;282876;282877;282878;282879;282880;282881;282882;282883;282884;282885;282886;282887;282888;282889;282890;282891;282892;282893 282855 68 QSVEDILK Unmodified 930.50221 0.50221163 1380 P36871 PGM1 Phosphoglucomutase-1 yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 54.493 54.781 2 0.017693 60940 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.252 26.46 276090000 0 0 0 0 0 18712000 9998900 0 9406700 19118000 46481000 31040000 14030000 32378000 94921000 42896 1380 38388 357737;357738;357739;357740;357741;357742;357743;357744;357745 282894;282895;282896 282894 3 QSVEHFTK Unmodified 974.48214 0.48214489 3043 Q7L1Q6 BZW1 Basic leucine zipper and W2 domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.6 3.67 3 7 1 1 1 1 1 1 1 1 1 1 14.831 13.854 2 0.011817 13329 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 114.99 50.23 895610000 172340000 256950000 250370000 22881000 28581000 28275000 26780000 0 18546000 47072000 0 43823000 0 0 0 42897 3043 38389 357746;357747;357748;357749;357750;357751;357752;357753;357754;357755 282897;282898;282899;282900 282898 3 QSVELCK Unmodified 862.42185 0.42185282 2040 Q00610 CLTC Clathrin heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 19.544 19.733 2 0.039725 19998 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 68.915 26.316 182960000 0 0 0 12131000 10132000 18251000 12211000 10280000 9974500 17577000 25167000 23499000 0 16038000 27694000 42898 2040 38390 357756;357757;357758;357759;357760;357761;357762;357763;357764;357765;357766 282901 282901 1 QSVENDIHGLR Unmodified 1266.6317 0.63166267 814 P05783 KRT18 Keratin, type I cytoskeletal 18 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 21 1 2 1 2 1 2 2 2 2 2 2 2 36.901 37.122 2;3 0.0039454 41060 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 57.149 34.231 347090000 0 0 0 21550000 33277000 24015000 23862000 15533000 19997000 31353000 27961000 53404000 36484000 23799000 35855000 42899 814 38391 357767;357768;357769;357770;357771;357772;357773;357774;357775;357776;357777;357778;357779;357780;357781;357782;357783;357784;357785;357786;357787 282902;282903;282904;282905;282906;282907;282908;282909 282906 6 QSVENDIHGLRK Unmodified 1394.7266 0.72662569 814 P05783 KRT18 Keratin, type I cytoskeletal 18 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.43 2.06 2 26 1 1 2 2 2 1 2 3 2 2 2 2 3 3 29.219 29.087 2;3 8.2557E-06 30443 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 93.959 72.659 8741200000 33782000 0 4372900 494320000 17815000 973190000 20482000 727950000 455680000 897200000 1037300000 1346500000 1083000000 837710000 811860000 42900 814 38392 357788;357789;357790;357791;357792;357793;357794;357795;357796;357797;357798;357799;357800;357801;357802;357803;357804;357805;357806;357807;357808;357809;357810;357811;357812;357813;357814;357815 282910;282911;282912;282913;282914;282915;282916;282917;282918;282919;282920;282921;282922;282923;282924;282925;282926;282927;282928;282929;282930;282931 282926 20 QSVFPFESGK Unmodified 1124.5502 0.55022446 1065 P17931 LGALS3 Galectin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 66.823 67.074 2 0.0033142 76991 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 76.943 62.825 90068000 0 0 0 0 0 22890000 1947000 5219300 0 0 7885100 17779000 0 2496700 31851000 42901 1065 38393 357816;357817;357818;357819;357820;357821;357822 282932;282933;282934;282935;282936 282932 5 QSVFPFESGKPFK Unmodified 1496.7664 0.76636524 1065 P17931 LGALS3 Galectin-3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.499 74.562 3 0.00059238 85202 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 59.294 51.687 210170000 0 0 0 14770000 5218000 9393200 13147000 25174000 6849500 17002000 18420000 24588000 9255100 21177000 45179000 42902 1065 38394 357823;357824;357825;357826;357827;357828;357829;357830;357831;357832;357833;357834 282937;282938;282939;282940;282941;282942;282943;282944;282945;282946;282947;282948;282949;282950;282951 282947 15 QSVLEGLSFSR Unmodified 1221.6354 0.63535107 4762 Q9NZB2 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 77.115 77.191 2 0.015691 89220 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 44.639 19.08 14638000 0 0 0 0 1864200 0 1580900 1939300 0 2743400 0 3323400 0 3187100 0 42903 4762 38395 357835;357836;357837;357838;357839;357840 282952;282953 282953 2 QSVSPPIPHLR Unmodified 1229.6881 0.68805534 2843 Q66K14 TBC1D9B TBC1 domain family member 9B yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 57.967 58.255 3 0.0065237 65847 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 38.875 32.998 62758000 0 0 0 0 0 9079700 0 6222400 0 7123000 7663000 14122000 6469200 5450400 6628600 42904 2843 38396 357841;357842;357843;357844;357845;357846;357847;357848 282954;282955;282956;282957 282957 4 QSVTYACNK Unmodified 1069.4862 0.48624399 859 P08174 CD55 Complement decay-accelerating factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.791 13.954 2 0.014773 13271 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 57.96 39.177 66552000 0 0 0 4982100 5528300 2155600 4129600 3764100 3389400 6300600 5038500 13216000 7450900 6164200 4432900 42905 859 38397 357849;357850;357851;357852;357853;357854;357855;357856;357857;357858;357859;357860 282958;282959;282960;282961;282962;282963;282964;282965;282966;282967 282959 10 QSVVVLMGSLAK Unmodified 1230.7006 0.70059386 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 81.534 81.645 2 2.6271E-05 94449 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 118.23 104.11 113200000 0 0 0 0 0 22019000 0 0 0 20746000 0 21740000 10521000 14800000 23370000 42906 3641 38398 357861;357862;357863;357864;357865;357866 282968;282969;282970 282968 2 QSYYSIAK Unmodified 958.476 0.47599688 3170 Q86VP6 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 35.202 35.345 2 0.042974 39085 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 49.418 30.613 125080000 0 0 0 7672800 0 37452000 11218000 11079000 0 26642000 0 15225000 15792000 0 0 42907 3170 38399 357867;357868;357869;357870;357871;357872;357873 282971 282971 1 QTADFLQEYVTNK Unmodified 1555.7518 0.75183739 5011 Q9ULX6 AKAP8L A-kinase anchor protein 8-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 77.532 77.223 2 1.1119E-12 88840 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 128.88 118.36 170560000 0 45007000 0 7847600 8657100 8948800 10422000 8788300 8796100 8805100 11015000 16025000 7884100 11782000 16580000 42908 5011 38400 357874;357875;357876;357877;357878;357879;357880;357881;357882;357883;357884;357885;357886 282972;282973;282974;282975;282976;282977;282978;282979 282975 8 QTAEETGLTPLETSR Unmodified 1631.8002 0.80024414 2226 Q13042 CDC16 Cell division cycle protein 16 homolog yes yes 0 0 0 By MS/MS 10 0 1 1 54.068 53.543 2 0.00043401 61155 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 85.845 71.155 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42909 2226 38401 357887 282980 282980 1 QTAEETGLTPLETSRK Unmodified 1759.8952 0.89520716 2226 Q13042 CDC16 Cell division cycle protein 16 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.56 3.86 3 1 5 1 2 1 1 1 1 1 1 46.237 43.964 3 0.004996 48722 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 33.872 21.671 220280000 7022600 47996000 4172000 0 0 0 0 0 0 38705000 32217000 38263000 31065000 20844000 0 42910 2226 38402 357888;357889;357890;357891;357892;357893;357894;357895;357896 282981;282982;282983;282984;282985;282986 282985 6 QTAISQPASGNTFSHHSMVSMLGK 2 Oxidation (M) 2547.1846 0.18460602 2380 Q14157 UBAP2L Ubiquitin-associated protein 2-like yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 44.505 45.027 3;4 5.2325E-19 50530 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 74.876 67.073 117810000 0 0 0 0 0 0 0 0 0 0 0 38568000 39620000 18553000 21070000 42911 2380 38403 357897;357898;357899;357900;357901 282987;282988;282989;282990;282991 282990 3872;3873 4 QTAISQPASGNTFSHHSMVSMLGK Unmodified 2515.1948 0.19477678 2380 Q14157 UBAP2L Ubiquitin-associated protein 2-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 2 2 1 2 65.103 65.378 3;4 2.7246E-17 74190 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.272 70.084 133160000 0 0 0 0 0 14318000 0 14566000 11027000 0 0 14385000 0 0 78865000 42912 2380 38403 357902;357903;357904;357905;357906;357907;357908;357909 282992;282993;282994;282995;282996 282993 5 QTAISQPASGNTFSHHSMVSMLGK Oxidation (M) 2531.1897 0.1896914 2380 Q14157 UBAP2L Ubiquitin-associated protein 2-like yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 54.679 54.831 4 2.2317E-08 61725 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 53.355 45.458 65364000 0 0 0 0 0 0 13681000 0 13545000 24488000 0 0 0 13651000 0 42913 2380 38403 357910;357911;357912;357913 282997 282997 3872;3873 1 QTALVELLK Unmodified 1013.6121 0.61209643 65 CON__P02769 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 79.385 78.266 2 0.0033477 89185 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 93.649 28.397 + 2737400000 29671000 79300000 13451000 287310000 351340000 194680000 175190000 149390000 151730000 324120000 303410000 223770000 118790000 114840000 220410000 42914 65 38404 357914;357915;357916;357917;357918;357919;357920;357921;357922;357923;357924;357925;357926;357927;357928;357929 282998;282999;283000;283001;283002;283003;283004;283005;283006;283007;283008;283009;283010;283011;283012 283008 15 QTALVELVK Unmodified 999.59645 0.59644637 64 CON__P02768-1;P02768 ALB Serum albumin yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.753 65.839 2 0.0094767 75274 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 66.621 40.682 + 837990000 0 0 0 331090000 17890000 20219000 10749000 262880000 12700000 31128000 38017000 39385000 37885000 14288000 21764000 42915 64 38405 357930;357931;357932;357933;357934;357935;357936;357937;357938;357939;357940;357941 283013;283014;283015;283016;283017;283018;283019;283020;283021;283022 283017 10 QTAQQIVSHVQNK Unmodified 1479.7794 0.77938954 4762 Q9NZB2 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 33.849 34.029 3 0.0046684 36971 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 34.444 21.677 71071000 0 0 0 0 9094400 6972900 6194400 0 7017500 0 16938000 0 14151000 0 10703000 42916 4762 38406 357942;357943;357944;357945;357946;357947;357948;357949 283023;283024;283025;283026;283027;283028;283029 283026 7 QTATQLLK Unmodified 901.52328 0.52328142 1900 P62424 RPL7A 60S ribosomal protein L7a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.853 33.037 2 0.02128 35236 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 62.107 15.294 393340000 0 0 0 27355000 29405000 26296000 29915000 28902000 17422000 35694000 38364000 47161000 38515000 33017000 41298000 42917 1900 38407 357950;357951;357952;357953;357954;357955;357956;357957;357958;357959;357960;357961 283030;283031;283032;283033;283034;283035 283035 4 QTAVSVENFIAELLPDK Unmodified 1872.9833 0.98329389 3922 Q96M27 PRRC1 Protein PRRC1 yes yes 0 0 0 By MS/MS 2 0 1 1 102.62 97.906 2 9.6405E-52 120947 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.1 122.89 16069000 0 16069000 0 0 0 0 0 0 0 0 0 0 0 0 0 42918 3922 38408 357962 283036;283037 283036 2 QTCQTYSFGK Unmodified 1218.5339 0.53392246 4487 Q9HAP2 MLXIP MLX-interacting protein yes yes 0 0 0 By MS/MS 2 0 1 1 35.167 30.411 2 0.038703 39811 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 55.549 46.335 6257200 0 6257200 0 0 0 0 0 0 0 0 0 0 0 0 0 42919 4487 38409 357963 283038 283038 1 QTDFEHRIPK Unmodified 1269.6466 0.64658446 2064 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30.481 29.943 3 0.0017381 39416 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 83 59.149 1230900000 238190000 0 24838000 50585000 34411000 80442000 47976000 62609000 45723000 109900000 107740000 119700000 50341000 65185000 193260000 42920 2064 38410 357964;357965;357966;357967;357968;357969;357970;357971;357972;357973;357974;357975;357976;357977 283039;283040;283041;283042;283043;283044;283045;283046;283047;283048;283049;283050;283051;283052 283047 9 QTDPSTPQQESSK Unmodified 1431.6478 0.64776625 2360 Q14004 CDK13 Cyclin-dependent kinase 13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 9.3116 9.4282 2 0.038215 7229 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.523 22.292 6179900 0 0 0 0 926660 893520 0 0 0 986950 0 0 0 1277500 2095300 42921 2360 38411 357978;357979;357980;357981;357982 283053 283053 1 QTDVGITHFR Unmodified 1172.5938 0.5938206 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 2 1 2 1 2 2 2 40.037 40.191 2;3 0.022076 43191 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.704 29.468 574290000 0 0 0 40927000 33438000 52608000 45515000 42636000 45889000 5385700 76492000 8566500 66939000 79698000 76198000 42922 2930 38412 357983;357984;357985;357986;357987;357988;357989;357990;357991;357992;357993;357994;357995;357996;357997;357998;357999;358000;358001;358002;358003;358004 283054;283055;283056;283057 283055 2 QTDVTGEEELTK Unmodified 1348.6358 0.63580458 2427 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 33.291 33.513 2 2.7066E-05 35719 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.618 75.477 44070000 0 0 0 0 2874100 4293700 3323900 2456900 3123600 0 0 4686500 8204700 6326400 8780200 42923 2427 38413 358005;358006;358007;358008;358009;358010;358011;358012;358013 283058;283059;283060;283061;283062;283063;283064 283060 7 QTEDVAEVLNR Unmodified 1272.631 0.63099397 456 O75122 CLASP2 CLIP-associating protein 2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 54.173 53.992 2 0.013744 61277 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 62.303 43.991 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42924 456 38414 358014;358015 283065;283066 283065 2 QTEEQVNDLK Unmodified 1202.5779 0.57789577 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.141 22.348 2 0.00064271 23654 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 145.72 105.66 421310000 0 0 0 23139000 18196000 34830000 19009000 17754000 19863000 37210000 49843000 62464000 45717000 34645000 58639000 42925 965 38415 358016;358017;358018;358019;358020;358021;358022;358023;358024;358025;358026;358027 283067;283068;283069;283070;283071;283072;283073;283074;283075;283076;283077;283078 283077 9 QTELFAHFIQPAAQK Unmodified 1727.8995 0.89950468 389 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.296 77.354 3 0.01268 88834 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 24.225 20.039 80297000 0 0 0 4392900 4722400 10450000 3735500 6090700 6696800 8960100 5345000 7900100 5856800 5128400 11018000 42926 389 38416 358028;358029;358030;358031;358032;358033;358034;358035;358036;358037;358038;358039 283079;283080;283081 283080 3 QTELGETFGEAGQK Unmodified 1493.6998 0.69980182 4909 Q9UHV7 MED13 Mediator of RNA polymerase II transcription subunit 13 yes yes 0 0 0 By MS/MS 2 0 1 1 53.299 47.507 2 0.001007 61615 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.705 49.924 14968000 0 14968000 0 0 0 0 0 0 0 0 0 0 0 0 0 42927 4909 38417 358040 283082 283082 1 QTEQADLINELYQGK Unmodified 1748.8581 0.85809337 3903 Q96K76 USP47 Ubiquitin carboxyl-terminal hydrolase 47 yes yes 0 0 0 By MS/MS 2 0 1 1 83.371 78.65 2 1.0501E-72 97722 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 198.97 160.98 80888000 0 80888000 0 0 0 0 0 0 0 0 0 0 0 0 0 42928 3903 38418 358041 283083 283083 1 QTESLESLLSK Unmodified 1233.6452 0.64524705 2135 Q07065 CKAP4 Cytoskeleton-associated protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.226 75.285 2 0.0016886 86760 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 83.862 59.89 104500000 0 0 0 9255500 7850900 7908800 9359600 9286500 6859000 9862800 9484400 10446000 6348800 6877500 10957000 42929 2135 38419 358042;358043;358044;358045;358046;358047;358048;358049;358050;358051;358052;358053 283084;283085;283086;283087;283088;283089;283090;283091 283089 8 QTESLVEK Unmodified 932.48148 0.48147619 2476 Q15021 NCAPD2 Condensin complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 17.727 17.625 2 0.011086 18212 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 77.732 28.374 103310000 0 39548000 0 4365400 2996500 6172600 3864000 3012900 2495100 9008300 6384800 6637700 4481800 5731000 8608300 42930 2476 38420 358054;358055;358056;358057;358058;358059;358060;358061;358062;358063;358064;358065;358066 283092;283093;283094;283095;283096;283097;283098 283092 7 QTESTSFLEK Unmodified 1168.5612 0.56118307 1819 P60900 PSMA6 Proteasome subunit alpha type-6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 40.184 38.75 2 0.00055911 44178 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 128.86 90.066 1459000000 41347000 1164900000 8618200 20898000 5293700 5910000 0 8802200 0 0 50165000 39964000 6070200 16896000 90100000 42931 1819 38421 358067;358068;358069;358070;358071;358072;358073;358074;358075;358076;358077;358078;358079;358080;358081 283099;283100;283101;283102;283103;283104;283105;283106;283107;283108;283109;283110;283111;283112;283113 283112 15 QTEVLLQPNPNAR Unmodified 1478.7841 0.78414057 5139 Q9Y371 SH3GLB1 Endophilin-B1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.212 52.358 2 1.1916E-144 59942 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 221.52 191.77 694510000 0 0 0 37968000 37741000 45287000 41690000 60352000 32566000 75367000 72074000 82072000 95189000 44913000 69296000 42932 5139 38422 358082;358083;358084;358085;358086;358087;358088;358089;358090;358091;358092;358093 283114;283115;283116;283117;283118;283119;283120;283121;283122;283123;283124;283125;283126;283127 283127 6 QTEVLLQPNPSAR Unmodified 1451.7732 0.77324153 4592 Q9NR46 SH3GLB2 Endophilin-B2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.805 52.948 2 1.3422E-15 58572 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 146.71 124.96 691040000 0 0 0 27340000 28118000 55150000 36188000 43201000 35983000 71250000 79765000 99137000 107480000 37973000 69454000 42933 4592 38423 358094;358095;358096;358097;358098;358099;358100;358101;358102;358103;358104;358105 283128;283129;283130;283131;283132;283133;283134;283135;283136;283137;283138;283139 283131 12 QTFCSSQTTSNTSR Unmodified 1603.6896 0.68964784 4683 Q9NVU0 POLR3E DNA-directed RNA polymerase III subunit RPC5 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 16.909 17.122 2 0.0003604 16788 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 75.695 73.541 20173000 0 0 0 0 1529300 1334000 1551500 1042700 0 2528100 2520600 3292700 2057000 1392400 2924400 42934 4683 38424 358106;358107;358108;358109;358110;358111;358112;358113;358114;358115 283140;283141;283142;283143;283144;283145 283145 6 QTFDLADAQTVLALSECAVTLK Unmodified 2393.2148 0.21482674 344 O43592 XPOT Exportin-T yes yes 0 0 0 By MS/MS 2 0 1 1 100.31 95.596 3 1.5922E-11 118177 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.248 78.744 18285000 0 18285000 0 0 0 0 0 0 0 0 0 0 0 0 0 42935 344 38425 358116 283146 283146 1 QTFENQVNR Unmodified 1134.5418 0.54178503 1179 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.169 22.374 2 0.0034025 22232 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 93.992 74.477 79549000 0 0 0 2854400 2730400 4938000 3089600 4282000 2364800 6595700 9599200 14175000 9623900 6362500 12933000 42936 1179 38426 358117;358118;358119;358120;358121;358122;358123;358124;358125;358126;358127;358128 283147;283148;283149;283150;283151;283152;283153;283154;283155;283156;283157 283154 11 QTFGYGAR Unmodified 898.42972 0.42971539 661 O95433 AHSA1 Activator of 90 kDa heat shock protein ATPase homolog 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 28.009 28.165 2 0.022194 30121 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 61.357 46.945 193280000 0 0 0 0 13225000 35372000 21550000 0 14245000 35177000 41523000 32187000 0 0 0 42937 661 38427 358129;358130;358131;358132;358133;358134;358135 283158 283158 1 QTFLLQTTK Unmodified 1078.6023 0.60226003 583 O94776 MTA2 Metastasis-associated protein MTA2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 55.699 55.818 2 0.0034781 63453 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 106.93 88.602 142600000 0 0 0 14085000 9852500 14812000 9678100 9327700 0 17346000 17485000 22032000 12331000 0 15649000 42938 583 38428 358136;358137;358138;358139;358140;358141;358142;358143;358144;358145 283159;283160;283161;283162;283163;283164;283165;283166;283167 283159 9 QTFNPTDTNALVAAVAFGK Unmodified 1964.0003 0.0003409361 3846 Q96G25 MED8 Mediator of RNA polymerase II transcription subunit 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 92.037 92.147 2 0.0010453 106931 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.314 47.209 10921000 0 0 0 0 998860 0 0 941640 660260 2457900 1407100 1543600 0 0 2911400 42939 3846 38429 358146;358147;358148;358149;358150;358151;358152 283168 283168 1 QTFPSEVVGK Unmodified 1090.5659 0.56587452 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 48.191 47.511 2 0.0042138 60880 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.696 65.606 128740000 0 43241000 0 0 5209600 0 4885100 7680000 3639700 9443800 10983000 14618000 9148200 8242200 11646000 42940 2804 38430 358153;358154;358155;358156;358157;358158;358159;358160;358161;358162;358163;358164 283169;283170;283171;283172;283173 283170 5 QTFSPFGQIMEIR Oxidation (M) 1568.7657 0.76571331 2048;1302 P31483;Q01085 TIA1;TIAL1 Nucleolysin TIA-1 isoform p40;Nucleolysin TIAR no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 82.671 82.775 2 3.1024E-07 95773 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 96.103 80.531 98953000 0 0 0 0 3748700 10601000 6271800 7805100 4483800 12923000 9827900 7481100 7734300 7897200 20179000 42941 1302;2048 38431 358165;358166;358167;358168;358169;358170;358171;358172;358173;358174;358175 283174;283175;283176;283177;283178;283179;283180;283181;283182;283183;283184 283174 1925 11 QTFSPFGQIMEIR Unmodified 1552.7708 0.77079869 2048;1302 P31483;Q01085 TIA1;TIAL1 Nucleolysin TIA-1 isoform p40;Nucleolysin TIAR no no 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 89.934 90.053 2 0.0026159 104347 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.836 50.032 4503100 0 0 0 0 0 0 0 0 0 1253800 0 0 0 521950 2727400 42942 1302;2048 38431 358176;358177;358178 283185 283185 1 QTGEGVGPQEYTLLK Unmodified 1618.8203 0.82025131 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 68.009 68.142 2 0.00063326 77394 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.924 45.06 59621000 0 0 0 2656800 0 5674200 3876500 3066700 4906000 4982700 8195200 5674100 4749000 5608500 10231000 42943 4819 38432 358179;358180;358181;358182;358183;358184;358185;358186;358187;358188;358189 283186;283187;283188;283189;283190;283191;283192;283193 283189 8 QTGIETPNK Unmodified 986.50327 0.50327426 1600 P49790 NUP153 Nuclear pore complex protein Nup153 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 2 1 1 1 1 1 1 1 1 1 16.67 16.849 2 0.0032698 15198 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 93.162 75.127 172700000 0 0 0 8082800 9603600 11722000 12878000 11621000 9036300 13550000 20099000 23551000 17059000 16036000 19463000 42944 1600 38433 358190;358191;358192;358193;358194;358195;358196;358197;358198;358199;358200;358201;358202 283194;283195;283196;283197;283198;283199;283200;283201;283202;283203;283204;283205;283206;283207;283208 283203 14 QTGIVLNRPVLR Unmodified 1364.8252 0.82521752 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.1 58.217 3 0.0011779 65534 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 52.693 42.905 211550000 0 0 0 12266000 10612000 27159000 14824000 13683000 15401000 18449000 11920000 29791000 17965000 15043000 24439000 42945 2290 38434 358203;358204;358205;358206;358207;358208;358209;358210;358211;358212;358213;358214 283209;283210;283211;283212;283213;283214;283215;283216;283217 283213 9 QTGIVLNRPVLRGEDGDK Unmodified 1966.0596 0.059587149 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 1 2 2 2 2 2 50.976 51.127 3;4 8.3697E-05 57746 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 74.428 38.4 1083200000 0 0 0 53322000 39673000 93164000 72188000 92448000 96047000 42480000 99474000 135360000 108300000 86476000 164310000 42946 2290 38435 358215;358216;358217;358218;358219;358220;358221;358222;358223;358224;358225;358226;358227;358228;358229;358230;358231;358232;358233;358234;358235;358236;358237 283218;283219;283220;283221;283222;283223;283224;283225;283226;283227;283228;283229;283230 283227 13 QTGQIIEDDLEEEDIK Unmodified 1873.8793 0.87928233 3334 Q8N4S0 CCDC82 Coiled-coil domain-containing protein 82 yes yes 0 0 0 By MS/MS 3 0 1 1 75.686 72.13 2 0.032305 86811 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 47.288 33.625 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42947 3334 38436 358238 283231 283231 1 QTGSGPLGNSYVER Unmodified 1463.7005 0.70047052 4872 Q9UER7 DAXX Death domain-associated protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.764 43.885 2 1.0965E-13 49232 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 128.36 88.304 179890000 0 0 0 14922000 15751000 14028000 14302000 9018600 10322000 22566000 25428000 0 18705000 10973000 23876000 42948 4872 38437 358239;358240;358241;358242;358243;358244;358245;358246;358247;358248;358249;358250 283232;283233;283234;283235;283236;283237;283238;283239;283240;283241;283242;283243;283244;283245;283246;283247 283240 15 QTGYLTIGGQR Unmodified 1192.62 0.62003536 206 O14733 MAP2K7 Dual specificity mitogen-activated protein kinase kinase 7 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 48.826 48.764 2 0.00036034 55000 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 98.044 80.813 70341000 0 0 0 10299000 10721000 0 13043000 12101000 0 0 0 0 10105000 14072000 0 42949 206 38438 358251;358252;358253;358254;358255;358256 283248;283249;283250;283251;283252 283250 5 QTHLQDLSEATQDVK Unmodified 1711.8377 0.83769228 2762 Q5SXH7 PLEKHS1 Pleckstrin homology domain-containing family S member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.81 2.8 3 1 22 3 1 2 2 2 1 2 1 2 2 2 2 2 2 58.847 58.161 2 0.0012752 66172 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 56.783 21.895 6377900000 0 1993300000 127280000 165280000 372140000 246060000 154520000 240790000 108710000 453480000 478240000 550920000 481150000 520330000 485710000 42950 2762 38439 358257;358258;358259;358260;358261;358262;358263;358264;358265;358266;358267;358268;358269;358270;358271;358272;358273;358274;358275;358276;358277;358278;358279;358280;358281;358282 283253;283254;283255;283256;283257;283258;283259;283260;283261;283262;283263;283264;283265 283253 11 QTHTVDSLSR Unmodified 1142.568 0.56799978 4002 Q96T88 UHRF1 E3 ubiquitin-protein ligase UHRF1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 14.592 14.827 3 0.014506 13985 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 45.879 37.992 74953000 0 0 0 0 0 10067000 9374600 5668900 5699500 0 968510 18270000 1795700 0 23108000 42951 4002 38440 358283;358284;358285;358286;358287;358288;358289;358290 283266;283267;283268 283268 3 QTHVAADQGQEK Unmodified 1310.6215 0.62149192 3657 Q92766 RREB1 Ras-responsive element-binding protein 1 yes yes 0 0 0 By MS/MS 2.67 0.471 1 2 3 6.6417 3.3217 2;3 2.2428E-05 5347 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.073 58.264 78494000 0 78494000 0 0 0 0 0 0 0 0 0 0 0 0 0 42952 3657 38441 358291;358292;358293 283269;283270;283271 283269 2 QTIDNSQGAYQEAFDISK Unmodified 2013.928 0.92796385 1214 P27348 YWHAQ 14-3-3 protein theta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.36 2.17 2 23 1 1 2 2 2 2 2 2 2 2 2 1 2 2 70.699 70.235 2;3 8.504E-97 80016 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 226.19 216.4 2260500000 54375000 1589400000 0 19432000 21388000 37875000 26390000 24753000 21296000 42277000 82541000 66898000 21974000 67165000 184710000 42953 1214 38442 358294;358295;358296;358297;358298;358299;358300;358301;358302;358303;358304;358305;358306;358307;358308;358309;358310;358311;358312;358313;358314;358315;358316;358317;358318 283272;283273;283274;283275;283276;283277;283278;283279;283280;283281;283282;283283;283284;283285;283286;283287;283288;283289;283290;283291;283292;283293 283287 18 QTIDNSQGAYQEAFDISKK Unmodified 2142.0229 0.022926872 1214 P27348 YWHAQ 14-3-3 protein theta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 63.212 63.524 3 6.1352E-07 72623 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 67.43 63.826 77042000 0 0 0 0 0 0 12061000 0 4001800 0 13642000 20232000 0 12226000 14878000 42954 1214 38443 358319;358320;358321;358322;358323;358324 283294;283295;283296;283297;283298;283299;283300 283300 7 QTIEEDKEPEK Unmodified 1344.6409 0.64088996 3325 Q8N3R9 MPP5 MAGUK p55 subfamily member 5 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 14.876 11.443 3 0.025556 14497 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 45.879 30.492 18753000 0 18753000 0 0 0 0 0 0 0 0 0 0 0 0 0 42955 3325 38444 358325;358326 283301;283302 283302 2 QTIERLEQEHTNR Unmodified 1652.823 0.82304527 4365 Q9H2G2 SLK STE20-like serine/threonine-protein kinase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 23.674 24.007 3 0.021977 25237 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 38.366 24.62 44131000 0 0 0 0 0 4762200 2700000 0 0 5562000 4610100 6637200 3690400 3456200 12713000 42956 4365 38445 358327;358328;358329;358330;358331;358332;358333;358334 283303;283304;283305;283306;283307 283306 3 QTIFENLK Unmodified 991.53385 0.53384611 280 O15379 HDAC3 Histone deacetylase 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 58.902 58.923 2 0.0075386 67231 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 89.296 51.162 139710000 0 0 0 17337000 11449000 15562000 14422000 13467000 15315000 15116000 0 23223000 13819000 0 0 42957 280 38446 358335;358336;358337;358338;358339;358340;358341;358342;358343;358344 283308;283309;283310;283311;283312;283313;283314;283315;283316 283313 9 QTIGALLTK Unmodified 943.57023 0.57023162 4183 Q9BVC3 DSCC1 Sister chromatid cohesion protein DCC1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 57.589 57.765 2 0.0080246 65888 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 70.816 45.997 177820000 0 0 0 13000000 0 15973000 12200000 17171000 0 17396000 21032000 22851000 17190000 16708000 24301000 42958 4183 38447 358345;358346;358347;358348;358349;358350;358351;358352;358353;358354;358355 283317;283318;283319;283320;283321;283322;283323;283324 283322 8 QTIHLQADQLQHK Unmodified 1558.8216 0.82158871 3105 Q7Z589 EMSY Protein EMSY yes yes 0 0 0 By MS/MS 2 0 1 1 44.949 38.084 3 0.0083911 52239 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.31 35.145 14772000 14772000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42959 3105 38448 358356 283325 283325 1 QTKPEFDQVLQGTAASTK Unmodified 1947.9902 0.99017018 5058 Q9UPT5 EXOC7 Exocyst complex component 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 62.463 61.509 3 0.020628 69731 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 27.514 17.765 89286000 0 22999000 0 8394100 0 7697900 0 23718000 0 0 0 13901000 0 12576000 0 42960 5058 38449 358357;358358;358359;358360;358361;358362 283326;283327;283328;283329 283328 4 QTLAAFVPLLLK Unmodified 1312.8119 0.81185887 2476 Q15021 NCAPD2 Condensin complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 98.61 94.627 2 0.00035505 118688 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.649 81.122 7296500 3461700 0 0 0 0 0 0 0 0 0 0 0 0 0 3834700 42961 2476 38450 358363;358364 283330;283331 283331 2 QTLCLQAQREEK Unmodified 1502.7511 0.75112588 2840 Q641Q2 FAM21A WASH complex subunit FAM21A yes yes 0 0 1 By MS/MS 10 0 1 1 29.093 29.561 3 0.010045 31766 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 42.809 28.123 4037100 0 0 0 0 0 0 0 0 0 0 4037100 0 0 0 0 42962 2840 38451 358365 283332 283332 1 QTLDEPEVPEIFTK Unmodified 1644.8247 0.82466798 2912 Q6NZY4 ZCCHC8 Zinc finger CCHC domain-containing protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.091 82.152 2 0.00051483 94799 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.911 68.286 52205000 0 0 0 2027900 3553300 5118700 2591000 3201000 2552400 5142500 3336900 5307200 3675300 5160200 10538000 42963 2912 38452 358366;358367;358368;358369;358370;358371;358372;358373;358374;358375;358376;358377 283333;283334;283335;283336;283337;283338;283339;283340;283341;283342;283343;283344 283336 12 QTLELAR Unmodified 829.46577 0.46576654 5018 Q9UMX0 UBQLN1 Ubiquilin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 32.005 32.149 2 0.03326 33904 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.138 0 368060000 0 0 0 23837000 28759000 26952000 30127000 41960000 21807000 48615000 0 48488000 0 34637000 62881000 42964 5018 38453 358378;358379;358380;358381;358382;358383;358384;358385;358386;358387 283345 283345 1 QTLENERGELANEVK Unmodified 1728.8642 0.86424139 1356 P35579 MYH9 Myosin-9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 10 25 4 4 2 2 2 2 3 2 2 2 2 2 2 2 2 44.218 43.343 2;3 9.3698E-297 48436 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 257.02 202.61 11121000000 38330000 390760000 172850000 702630000 693330000 828430000 915900000 638830000 813050000 1344400000 1062000000 1103700000 804400000 521500000 1090900000 42965 1356 38454 358388;358389;358390;358391;358392;358393;358394;358395;358396;358397;358398;358399;358400;358401;358402;358403;358404;358405;358406;358407;358408;358409;358410;358411;358412;358413;358414;358415;358416;358417;358418;358419;358420;358421;358422 283346;283347;283348;283349;283350;283351;283352;283353;283354;283355;283356;283357;283358;283359;283360;283361;283362;283363;283364;283365;283366;283367;283368;283369;283370;283371 283364 23 QTLGPVLDSGR Unmodified 1141.6091 0.60913632 4401 Q9H4L5 OSBPL3 Oxysterol-binding protein-related protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 49.9 49.902 2 0.0024322 56196 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 67.726 38.309 71959000 0 0 0 13775000 12611000 10546000 7733500 0 6187300 11753000 0 0 0 0 9352700 42966 4401 38455 358423;358424;358425;358426;358427;358428;358429;358430;358431 283372;283373;283374;283375;283376;283377;283378 283373 7 QTLGYHVYPTCR Unmodified 1493.7085 0.70853279 375 O43847 NRD1 Nardilysin yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 44.593 45.088 3 0.028327 49366 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 28.976 18.872 21871000 0 0 0 0 0 0 0 0 0 0 0 0 0 5646400 16224000 42967 375 38456 358432;358433 283379 283379 1 QTLLALEK Unmodified 914.54368 0.54368251 413 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta yes yes 0 0 0 By matching By matching By MS/MS By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 55.483 55.825 2 0.038203 62266 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.113 26.481 39710000 0 0 0 0 0 7047000 0 0 1507100 7662400 6738100 8165900 0 0 8589700 42968 413 38457 358434;358435;358436;358437;358438;358439 283380 283380 1 QTLLTNAFVQK Unmodified 1261.703 0.7030367 1636 P50748 KNTC1 Kinetochore-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 6.71 3.81 2 1 4 1 2 1 1 1 1 73.38 70.637 2 1.6581E-09 91495 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 144.77 106.2 88478000 44996000 34910000 0 0 1283800 0 0 0 0 0 0 0 0 2936100 4353200 42969 1636 38458 358440;358441;358442;358443;358444;358445;358446 283381;283382;283383;283384 283384 4 QTLMWSATWPK Oxidation (M) 1363.6595 0.65945733 1062;3670 P17844;Q92841 DDX5;DDX17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 77.768 77.854 2 0.0010555 89726 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 71.614 52.343 81818000 0 0 0 0 3032300 13708000 5904800 14449000 8804200 13711000 0 0 0 5592900 16615000 42970 1062;3670 38459 358447;358448;358449;358450;358451;358452;358453;358454 283385;283386;283387;283388 283388 1491 4 QTLMWSATWPK Unmodified 1347.6645 0.66454271 1062;3670 P17844;Q92841 DDX5;DDX17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 82.328 82.478 2 0.0013382 95360 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 86.898 69.873 30643000 0 0 0 0 0 0 0 4709700 0 4130900 0 0 0 5443200 16359000 42971 1062;3670 38459 358455;358456;358457;358458 283389;283390;283391;283392;283393 283392 5 QTLNAIK Unmodified 786.45995 0.45995289 437 O60841 EIF5B Eukaryotic translation initiation factor 5B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 15 2 2 1 2 1 1 2 1 1 2 21.695 21.915 2 0.023335 23260 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 90.706 8.3207 376610000 0 0 0 39908000 29919000 0 20052000 0 41572000 20403000 28089000 87619000 16266000 15086000 77700000 42972 437 38460 358459;358460;358461;358462;358463;358464;358465;358466;358467;358468;358469;358470;358471;358472;358473 283394;283395;283396 283396 3 QTLPVAPR Unmodified 880.51305 0.51305109 2960 Q6PJT7 ZC3H14 Zinc finger CCCH domain-containing protein 14 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 38.021 38.192 2 0.028474 42128 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 56.721 26.536 69233000 0 0 0 4970600 4903700 4355800 5857800 0 5856400 7180300 8882500 9157900 6798500 0 11269000 42973 2960 38461 358474;358475;358476;358477;358478;358479;358480;358481;358482;358483 283397;283398;283399;283400;283401 283400 5 QTLPVIYVK Unmodified 1059.6328 0.63283187 1605 P49841 GSK3B Glycogen synthase kinase-3 beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 71.485 71.548 2 0.0094557 82635 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 66.682 48.646 43361000 0 0 0 1929100 2267700 3381400 2369900 4429500 0 6384300 5316400 3620600 3316100 3223600 7122000 42974 1605 38462 358484;358485;358486;358487;358488;358489;358490;358491;358492;358493;358494 283402;283403;283404;283405;283406;283407;283408 283408 7 QTLQEDLLR Unmodified 1114.5982 0.59823728 1474 P43246 MSH2 DNA mismatch repair protein Msh2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 59.634 59.696 2 0.0035825 68053 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 109.11 45.691 140090000 0 0 0 10362000 7559300 21201000 11502000 0 8034800 16904000 0 20562000 0 13785000 30184000 42975 1474 38463 358495;358496;358497;358498;358499;358500;358501;358502;358503 283409;283410;283411;283412 283409 4 QTLQSEQPLQVAR Unmodified 1496.7947 0.79470526 1369 P35998 PSMC2 26S protease regulatory subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 51.005 49.872 2 0 55525 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 271.62 222.27 1354700000 6405300 252870000 0 83131000 90775000 118900000 35846000 30178000 28401000 122820000 188780000 207180000 42481000 47203000 99720000 42976 1369 38464 358504;358505;358506;358507;358508;358509;358510;358511;358512;358513;358514;358515;358516;358517;358518 283413;283414;283415;283416;283417;283418;283419;283420;283421;283422;283423;283424;283425;283426;283427;283428;283429;283430 283418 18 QTLQSEQPLQVARCTK Unmodified 1885.968 0.96799495 1369 P35998 PSMC2 26S protease regulatory subunit 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 52.937 46.478 2;3 0.0025389 63387 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.745 64.247 259070000 199470000 29272000 30332000 0 0 0 0 0 0 0 0 0 0 0 0 42977 1369 38465 358519;358520;358521;358522 283431;283432;283433;283434;283435 283434 5 QTLSLQAQREEK Unmodified 1429.7525 0.75250609 5195 Q9Y4E1 FAM21C WASH complex subunit FAM21C yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 28.41 27.858 3 0.0025555 35886 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 73.848 53.385 23068000 0 0 5793900 0 0 0 4263600 0 0 0 0 0 0 3731900 9278300 42978 5195 38466 358523;358524;358525;358526 283436;283437;283438;283439 283438 4 QTLSTPGTIILGTIPVPK Unmodified 1835.0768 0.076800343 4125 Q9BSD7 NTPCR Cancer-related nucleoside-triphosphatase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 92.713 92.819 2 0.0015416 107724 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 61.375 55.769 40556000 0 0 0 0 2323100 2190500 1140900 3693100 1779200 6698400 4372600 4172700 1867300 2728600 9589100 42979 4125 38467 358527;358528;358529;358530;358531;358532;358533;358534;358535;358536;358537 283440;283441;283442;283443;283444;283445;283446;283447;283448;283449 283445 10 QTLTESMLEPVPELK Unmodified 1713.8859 0.88588803 623 O95155 UBE4B Ubiquitin conjugation factor E4 B yes yes 0 0 0 By MS/MS 10 0 1 1 83.085 83.114 2 0.0013689 96243 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 52.928 40.715 2316700 0 0 0 0 0 2316700 0 0 0 0 0 0 0 0 0 42980 623 38468 358538 283450 283450 1 QTMGFEVPGVSSEENGHSFHTPQK Oxidation (M) 2645.1816 0.18162913 5184 Q9Y450 HBS1L HBS1-like protein yes yes 0 1 0 By MS/MS 2 0 1 1 71.516 63.249 4 6.7187E-06 84204 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.749 61.182 13917000 13917000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42981 5184 38469 358539 283451 283451 6552 1 QTMGFEVPGVSSEENGHSFHTPQK Unmodified 2629.1867 0.18671451 5184 Q9Y450 HBS1L HBS1-like protein yes yes 0 0 0 By MS/MS 2 0 1 1 77.313 69.183 4 0.00020153 91115 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.235 50.507 21346000 21346000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42982 5184 38469 358540 283452 283452 1 QTNDVLLTFEALK Unmodified 1490.7981 0.7980593 5192 Q9Y4B6 VPRBP Protein VPRBP yes yes 0 0 0 By MS/MS 2 0 1 1 95.446 90.581 2 0.0021274 112360 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.163 82.019 19965000 0 19965000 0 0 0 0 0 0 0 0 0 0 0 0 0 42983 5192 38470 358541 283453 283453 1 QTNLENLDQAFSVAER Unmodified 1833.8857 0.88570511 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 81.627 81.734 2 0.00071452 94625 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 73.848 58.972 41336000 0 0 0 0 2682300 4069300 2222800 3954200 2687900 5607600 4010300 8142300 0 0 7959900 42984 2501 38471 358542;358543;358544;358545;358546;358547;358548;358549;358550 283454;283455;283456;283457;283458;283459 283454 6 QTNPSAMEVEEDDPVPEIR Unmodified 2154.9739 0.97392777 1755 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 74.559 74.796 2 1.1584E-46 85777 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 127.71 115.44 25645000 0 0 0 0 0 0 0 0 0 0 6889300 0 0 4264900 14490000 42985 1755 38472 358551;358552;358553 283460;283461;283462 283460 3 QTNPSAMEVEEDDPVPEIRR Unmodified 2311.075 0.075038797 1755 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 66.834 66.97 3 7.2968E-12 76656 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 82.877 73.831 113050000 0 0 0 3672300 0 6025100 2925100 6214400 3343200 5218500 16340000 12078000 0 9686100 47549000 42986 1755 38473 358554;358555;358556;358557;358558;358559;358560;358561;358562;358563 283463;283464;283465;283466;283467;283468;283469;283470;283471 283470 9 QTNPSAMEVEEDDPVPEIRR Oxidation (M) 2327.07 0.069953419 1755 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 1 1 By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 60.158 60.2 3 3.5343E-07 68666 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 65.47 62.231 79643000 0 0 0 6999900 5913200 6439700 5495500 4482600 6163800 6049200 13411000 0 0 0 24688000 42987 1755 38473 358564;358565;358566;358567;358568;358569;358570;358571;358572 283472 283472 2868 0 QTPHSEIIFYK Unmodified 1361.698 0.69795133 4846 Q9UBL3 ASH2L Set1/Ash2 histone methyltransferase complex subunit ASH2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.15 3.37 3 10 2 1 1 1 1 1 1 1 1 1 1 1 54.985 53.641 2;3 0.00045877 76854 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.22 57.035 427470000 133080000 0 33319000 0 0 21038000 8741400 13048000 16903000 29025000 28565000 41895000 34722000 22020000 45122000 42988 4846 38474 358573;358574;358575;358576;358577;358578;358579;358580;358581;358582;358583;358584;358585 283473;283474;283475;283476;283477;283478;283479;283480;283481;283482 283477 8 QTPSLPEPK Unmodified 995.52876 0.52876073 2136 Q07157 TJP1 Tight junction protein ZO-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 39.967 40.24 2 0.025904 44913 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 50.04 22.786 35275000 0 0 0 0 0 9419300 5588800 2812900 0 0 0 0 4803100 4705700 7945300 42989 2136 38475 358586;358587;358588;358589;358590;358591 283483 283483 1 QTPSPDVVLR Unmodified 1110.6033 0.60332266 5054 Q9UPQ0 LIMCH1 LIM and calponin homology domains-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.989 52.136 2 0.0043308 58653 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 73.233 53.456 236860000 0 0 0 13276000 12852000 24824000 17541000 13806000 17269000 24796000 28163000 25608000 17020000 15620000 26087000 42990 5054 38476 358592;358593;358594;358595;358596;358597;358598;358599;358600;358601;358602;358603 283484;283485;283486;283487;283488;283489;283490;283491;283492;283493;283494;283495 283489 9 QTPSRQPPLPHR Unmodified 1412.7637 0.7636799 2138 Q07666 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.721 22.927 3 0.00071832 23662 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 63.164 54.434 306330000 0 0 0 17219000 13665000 16159000 18744000 18052000 12678000 28251000 30290000 46597000 31385000 31902000 41386000 42991 2138 38477 358604;358605;358606;358607;358608;358609;358610;358611;358612;358613;358614;358615 283496;283497;283498;283499;283500;283501;283502;283503;283504;283505;283506;283507 283498 10 QTPTPPTTQLPQQVQPSLPAAPSADQPQQQPR Unmodified 3431.7433 0.74334497 2171 Q09472 EP300 Histone acetyltransferase p300 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 15 1 2 2 2 2 1 2 1 1 1 77.426 77.45 3;4 1.2736E-34 89903 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 75.261 65.203 145940000 0 0 0 7148000 18109000 20628000 20259000 21420000 10312000 20275000 0 12173000 9397400 6216000 0 42992 2171 38478 358616;358617;358618;358619;358620;358621;358622;358623;358624;358625;358626;358627;358628;358629;358630 283508;283509;283510;283511;283512;283513;283514;283515;283516;283517;283518 283514 11 QTQALADQFEDK Unmodified 1392.6521 0.65212334 2933 Q6P3X3 TTC27 Tetratricopeptide repeat protein 27 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 45.896 46.116 2 0.00038013 50738 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 81.017 43.825 35233000 0 0 0 0 3104100 8479200 0 0 0 0 7509400 5500200 5901500 4738500 0 42993 2933 38479 358631;358632;358633;358634;358635;358636 283519;283520;283521;283522;283523;283524;283525 283522 7 QTQNFDAEAVCR Unmodified 1437.6307 0.6306764 637 O95263 PDE8B High affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8B yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 38.799 39.155 2 0.00094924 43289 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 72.2 52.21 39133000 0 0 0 0 0 4251700 3150600 0 0 3606300 7410500 5320200 5735600 4282700 5375700 42994 637 38480 358637;358638;358639;358640;358641;358642;358643;358644;358645 283526;283527;283528;283529;283530;283531;283532;283533 283529 7 QTQPTVNWVVPVADK Unmodified 1680.8835 0.88352026 4836 Q9UBC2 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 yes yes 0 0 0 By MS/MS 2 0 1 1 83.154 78.434 2 0.00164 97414 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.494 67.588 70854000 0 70854000 0 0 0 0 0 0 0 0 0 0 0 0 0 42995 4836 38481 358646 283534 283534 1 QTQQRPTDMSALNNLFGPQK Oxidation (M) 2289.1172 0.11717838 2932 Q6P3W7 SCYL2 SCY1-like protein 2 yes yes 0 1 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 68.488 68.604 3 0.00012994 78430 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 48.288 39.688 52956000 0 0 0 0 0 8715400 11052000 0 10524000 12099000 0 0 0 10566000 0 42996 2932 38482 358647;358648;358649;358650;358651 283535;283536;283537 283537 4565 3 QTQSDLTIEK Unmodified 1161.5877 0.58773217 3148 Q86UE8 TLK2 Serine/threonine-protein kinase tousled-like 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 29.332 29.433 2 0.0068811 32166 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 63.816 24.512 27857000 0 0 0 0 1828600 3655600 3635200 0 3134600 4848400 4726900 0 0 6027700 0 42997 3148 38483 358652;358653;358654;358655;358656;358657;358658 283538;283539;283540;283541 283538 3 QTQTFTTYSDNQPGVLIQVYEGER Unmodified 2773.3195 0.31950282 934 P11142 HSPA8 Heat shock cognate 71 kDa protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.83 2.61 1 5 1 1 1 1 1 1 85.914 85.418 3 4.2576E-08 99170 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 52.79 46.067 73429000 0 11777000 0 3055900 0 0 0 0 0 18293000 12351000 7040700 0 0 20911000 42998 934 38484 358659;358660;358661;358662;358663;358664 283542;283543;283544;283545;283546;283547;283548;283549 283546 8 QTQTFTTYSDNQPGVLIQVYEGERAMTK Oxidation (M) 3220.5347 0.53465733 934 P11142 HSPA8 Heat shock cognate 71 kDa protein yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 88.149 81.663 3 8.8981E-34 103921 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.596 87.231 114590000 95510000 19078000 0 0 0 0 0 0 0 0 0 0 0 0 0 42999 934 38485 358665;358666 283550;283551;283552;283553 283552 1216 4 QTQTFTTYSDNQPGVLIQVYEGERAMTK Unmodified 3204.5397 0.53974271 934 P11142 HSPA8 Heat shock cognate 71 kDa protein yes yes 0 0 1 By MS/MS 2 0 2 2 91.412 83.281 3;4 3.3465E-56 107959 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 118.43 112.4 159890000 159890000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43000 934 38485 358667;358668 283554;283555;283556 283554 2 QTQTPDLLPEALEAQVLPR Unmodified 2118.1321 0.13208339 5007 Q9ULV3 CIZ1 Cip1-interacting zinc finger protein yes yes 0 0 0 By MS/MS By MS/MS 10 0 3 1 2 92.997 93.128 2;3 0.011875 107990 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.661 28.555 6769800 0 0 0 0 0 0 0 0 0 2131500 0 0 0 0 4638300 43001 5007 38486 358669;358670;358671 283557;283558 283557 1 QTQVNEATK Unmodified 1017.5091 0.50908792 3579 Q8WWY3 PRPF31 U4/U6 small nuclear ribonucleoprotein Prp31 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 6.557 6.6592 2 0.0032704 4553 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 90.601 50.938 27526000 0 0 0 2251700 2770700 4345700 4505100 5023500 3588100 2067300 1380400 0 0 0 1592900 43002 3579 38487 358672;358673;358674;358675;358676;358677;358678;358679;358680 283559;283560;283561 283560 3 QTQVSVLPEGGETPLFK Unmodified 1828.9571 0.95707914 819 P06396;CON__Q3SX14 GSN Gelsolin yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 82.318 81.799 2 1.4198E-62 101258 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 161.21 144.67 + 394270000 0 118790000 0 29908000 23017000 20978000 19544000 20773000 17265000 26253000 25131000 35791000 16467000 15752000 24603000 43003 819 38488 358681;358682;358683;358684;358685;358686;358687;358688;358689;358690;358691;358692;358693;358694 283562;283563;283564;283565;283566;283567;283568;283569;283570;283571;283572;283573;283574 283565 13 QTRDVITCEPQGSLIDTK Unmodified 2060.0208 0.020818382 3709 Q93074 MED12 Mediator of RNA polymerase II transcription subunit 12 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 63.009 58.17 3 0.0018795 74929 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 29.577 20.53 13159000 0 10136000 3022800 0 0 0 0 0 0 0 0 0 0 0 0 43004 3709 38489 358695;358696 283575 283575 1 QTRLGLEAK Unmodified 1014.5822 0.58219329 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 1 By MS/MS 2 0 1 1 29.031 24.683 2 0.036233 32389 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.42 19.629 33360000 0 33360000 0 0 0 0 0 0 0 0 0 0 0 0 0 43005 848 38490 358697 283576 283576 1 QTRPDSFQER Unmodified 1262.6004 0.60036255 3134 Q86TC9 MYPN Myopalladin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 2 1 1 1 1 1 1 1 1 1 1 15.627 15.768 3 0.0019532 14213 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 75.416 58.839 600740000 0 0 0 33726000 29440000 34170000 35875000 30600000 33769000 53586000 68232000 82086000 53464000 54140000 91647000 43006 3134 38491 358698;358699;358700;358701;358702;358703;358704;358705;358706;358707;358708;358709;358710 283577;283578;283579;283580;283581;283582;283583;283584;283585;283586;283587 283583 4 QTSEGANSTTDSIQEPVVLFHSR Unmodified 2502.1987 0.19865941 3999 Q96T58 SPEN Msx2-interacting protein yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 75.076 75.248 3 0.00098861 86647 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 32.337 24.344 26750000 0 0 0 0 0 0 0 5216900 3146100 3629000 6185600 5529800 0 3043000 0 43007 3999 38492 358711;358712;358713;358714;358715;358716 283588;283589 283588 2 QTSSTPSSLALTSASR Unmodified 1592.8006 0.8005785 2759 Q5SW79 CEP170 Centrosomal protein of 170 kDa yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 48.627 48.729 2 3.1542E-10 54928 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 92.856 83.201 73084000 0 0 0 8575100 5391200 8038400 6712600 5145800 0 9029100 8580800 0 5435900 7653400 8522000 43008 2759 38493 358717;358718;358719;358720;358721;358722;358723;358724;358725;358726 283590;283591;283592;283593;283594;283595;283596;283597;283598;283599;283600 283593 11 QTSTQTVETR Unmodified 1149.5626 0.56258006 2429 Q14678 KANK1 KN motif and ankyrin repeat domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 8.7006 8.834 2 0.0025814 6542 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.111 72.59 33106000 0 0 0 2179100 1804200 2151900 1938300 1647900 1656400 2686400 6818100 3966100 3108900 1846000 3303100 43009 2429 38494 358727;358728;358729;358730;358731;358732;358733;358734;358735;358736;358737;358738 283601;283602;283603;283604;283605;283606 283603 6 QTTEDEQAREAK Unmodified 1404.6481 0.6481006 3179 Q86W56 PARG Poly(ADP-ribose) glycohydrolase yes yes 0 0 1 By MS/MS 2.5 0.5 2 2 4 6.5361 3.2339 2;3 4.8044E-07 4804 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 114.24 91.122 87532000 0 87532000 0 0 0 0 0 0 0 0 0 0 0 0 0 43010 3179 38495 358739;358740;358741;358742 283607;283608 283608 2 QTTGEEVLLIQEK Unmodified 1486.7879 0.78788854 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 67.375 66.408 2 0.0011474 76164 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 64.64 47.923 33858000 0 16035000 0 0 0 3136300 0 1634800 0 0 7575400 5475900 0 0 0 43011 5049 38496 358743;358744;358745;358746;358747 283609;283610;283611;283612 283611 4 QTTITSHFAK Unmodified 1132.5877 0.58767259 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 15 1 2 2 2 1 1 1 1 1 2 1 35.808 35.917 2 0.0033461 58306 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 76.827 43.986 89610000 0 0 0 5328200 8794900 16201000 11015000 0 3774200 4500700 8591000 5536700 4963000 11600000 9304400 43012 1201 38497 358748;358749;358750;358751;358752;358753;358754;358755;358756;358757;358758;358759;358760;358761;358762 283613;283614;283615;283616;283617;283618;283619;283620 283615 8 QTTPESDFNLQALR Unmodified 1618.7951 0.79509919 3098 Q7Z4H7 HAUS6 HAUS augmin-like complex subunit 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 75.933 75.972 2 7.5862E-19 87689 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 138.71 104.84 100410000 0 0 0 5634700 6577800 15648000 8027800 7264700 5927100 9909400 10735000 13346000 8790400 8544200 0 43013 3098 38498 358763;358764;358765;358766;358767;358768;358769;358770;358771;358772;358773 283621;283622;283623;283624;283625;283626;283627;283628;283629;283630 283621 10 QTTQDAPEEVR Unmodified 1272.5946 0.59460847 4786 Q9P013 CWC15 Spliceosome-associated protein CWC15 homolog yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 18.582 18.829 2 0.0086747 18067 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.579 35.908 5905900 0 0 0 0 873000 630780 0 0 0 0 0 1736400 0 833520 1832200 43014 4786 38499 358774;358775;358776;358777;358778 283631 283631 1 QTTVSNSQQAYQEAFEISK Unmodified 2158.0178 0.017841494 1311 P31946 YWHAB 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.94 3.37 5 4 24 4 5 2 2 2 2 2 2 2 2 2 2 2 2 71.492 70.221 2;3 8.0087E-268 87516 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 340.34 306.65 3277000000 77235000 2603500000 0 11424000 13932000 35468000 18352000 15995000 17538000 37985000 81904000 80674000 19379000 48730000 214940000 43015 1311 38500 358779;358780;358781;358782;358783;358784;358785;358786;358787;358788;358789;358790;358791;358792;358793;358794;358795;358796;358797;358798;358799;358800;358801;358802;358803;358804;358805;358806;358807;358808;358809;358810;358811 283632;283633;283634;283635;283636;283637;283638;283639;283640;283641;283642;283643;283644;283645;283646;283647;283648;283649;283650;283651;283652;283653;283654 283637 19 QTTVSNSQQAYQEAFEISKK Unmodified 2286.1128 0.11280451 1311 P31946 YWHAB 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 64.811 64.079 3 1.0039E-23 82535 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.231 70.977 271150000 0 123900000 0 7727900 3582600 5105300 10265000 7286600 4842600 0 21876000 36097000 6613000 14674000 29188000 43016 1311 38501 358812;358813;358814;358815;358816;358817;358818;358819;358820;358821;358822;358823;358824 283655;283656;283657;283658;283659;283660;283661;283662 283656 8 QTVAVGVIK Unmodified 913.55967 0.55966693 1960 P68104;Q5VTE0;Q05639 EEF1A1;EEF1A1P5;EEF1A2 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 32 3 2 3 2 3 2 2 3 3 4 3 2 44.008 44.196 1;2 4.2985E-158 49685 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 237.08 142.82 103330000000 0 0 0 12172000000 7659300000 6748700000 8197900000 7062000000 5094800000 8246200000 11744000000 15674000000 5925400000 5835400000 8966200000 43017 1960 38502 358825;358826;358827;358828;358829;358830;358831;358832;358833;358834;358835;358836;358837;358838;358839;358840;358841;358842;358843;358844;358845;358846;358847;358848;358849;358850;358851;358852;358853;358854;358855;358856 283663;283664;283665;283666;283667;283668;283669;283670;283671;283672;283673;283674;283675;283676;283677;283678;283679;283680;283681;283682;283683;283684;283685;283686;283687;283688;283689;283690;283691;283692;283693;283694;283695;283696;283697 283665 34 QTVAVGVIKAVDK Unmodified 1326.7871 0.78710068 1960 P68104;Q5VTE0 EEF1A1;EEF1A1P5 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3 yes no 0 0 1 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 55.807 56.104 3 0.041393 63826 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 29.638 14.098 27774000 0 0 0 0 0 0 2518900 3575800 2104300 0 0 6012700 4132300 2374000 7056100 43018 1960 38503 358857;358858;358859;358860;358861;358862;358863 283698 283698 1 QTVEADVNGLRR Unmodified 1356.711 0.71097563 70 CON__P08779;P08779 KRT16 Keratin, type I cytoskeletal 16 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 25 2 2 2 2 2 2 2 2 2 3 2 2 37.664 37.851 2;3 3.2896E-23 41965 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 182.64 163.66 + 4393100000 0 0 0 403460000 79184000 83162000 242990000 307920000 58823000 201860000 130300000 143000000 2585500000 111040000 45913000 43019 70 38504 358864;358865;358866;358867;358868;358869;358870;358871;358872;358873;358874;358875;358876;358877;358878;358879;358880;358881;358882;358883;358884;358885;358886;358887;358888 283699;283700;283701;283702;283703;283704;283705;283706;283707;283708;283709;283710;283711;283712;283713;283714;283715;283716;283717 283708 8 QTVFLLEK Unmodified 976.55933 0.55933258 423 O60678 PRMT3 Protein arginine N-methyltransferase 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 68.183 68.058 2 0.033332 78118 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 53.775 17.589 43108000 0 0 0 5402700 4390100 9390900 5776700 7424300 0 10724000 0 0 0 0 0 43020 423 38505 358889;358890;358891;358892;358893;358894 283718;283719;283720 283718 3 QTVFYMEDYLTVK Oxidation (M) 1651.7804 0.78036033 4069 Q99873 PRMT1 Protein arginine N-methyltransferase 1 yes yes 0 1 0 By MS/MS 2 0 1 1 82.789 74.659 2 0.020957 97642 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.423 40.419 12426000 12426000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43021 4069 38506 358895 283721 283721 1 QTVFYMEDYLTVK Unmodified 1635.7854 0.7854457 4069 Q99873 PRMT1 Protein arginine N-methyltransferase 1 yes yes 0 0 0 By MS/MS 2 0 1 1 92.424 84.293 2 0.0058413 109263 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.692 69.277 7931300 7931300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43022 4069 38506 358896 283722 283722 1 QTVMFSATFPR Oxidation (M) 1299.6282 0.6281572 3041 Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 70.599 70.613 2 0.00018876 81157 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 93.325 81.477 119710000 0 0 0 4915600 8613900 15295000 11030000 11580000 0 19267000 16466000 22881000 0 9658600 0 43023 3041 38507 358897;358898;358899;358900;358901;358902;358903;358904;358905 283723;283724;283725;283726;283727;283728;283729;283730 283724 4661 8 QTVPDVNTEPSQNEQIIWDDPTAREER Unmodified 3166.4803 0.48031357 3621 Q92547 TOPBP1 DNA topoisomerase 2-binding protein 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 75.155 75.256 3 3.9267E-14 86863 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 55.061 42.123 47917000 0 0 0 0 3810800 5493400 0 4636800 0 7516100 5932700 4731100 3599700 4563300 7632800 43024 3621 38508 358906;358907;358908;358909;358910;358911;358912;358913;358914 283731;283732;283733;283734;283735;283736;283737;283738 283731 7 QTYDDGAATR Unmodified 1096.4785 0.47851608 2960 Q6PJT7 ZC3H14 Zinc finger CCCH domain-containing protein 14 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 11.445 11.611 2 0.029647 10103 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 43.282 29.125 15463000 0 0 0 0 927880 0 1483300 1328300 1258100 1516800 0 2729700 2071800 1906500 2240400 43025 2960 38509 358915;358916;358917;358918;358919;358920;358921;358922;358923 283739;283740 283740 2 QTYFLPVIGLVDAEK Unmodified 1691.9134 0.91342341 1066 P17980 PSMC3 26S protease regulatory subunit 6A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 96.683 96.759 2 6.3051E-27 112695 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 131.69 111.39 68362000 0 0 0 1435600 2453600 2302600 750440 1604500 1240700 23247000 13554000 7770200 0 1612000 12391000 43026 1066 38510 358924;358925;358926;358927;358928;358929;358930;358931;358932;358933;358934 283741;283742;283743;283744;283745;283746;283747;283748;283749;283750;283751 283746 11 QTYPPEHEPSIPENLEDK Unmodified 2121.9855 0.98547873 1453 P42338 PIK3CB Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform yes yes 0 0 0 By MS/MS 3 0 1 1 63.675 58.929 3 0.041134 72253 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 23.799 20.306 2131000 0 2131000 0 0 0 0 0 0 0 0 0 0 0 0 0 43027 1453 38511 358935 283752 283752 1 QTYSTEPNNLK Unmodified 1293.6201 0.62009493 1510 P46779 RPL28 60S ribosomal protein L28 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 27.584 26.926 2 4.2836E-07 29245 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 194.84 179.18 478970000 9913400 21009000 0 28824000 30322000 33075000 0 30567000 0 52944000 55259000 62717000 55602000 40408000 58333000 43028 1510 38512 358936;358937;358938;358939;358940;358941;358942;358943;358944;358945;358946;358947;358948 283753;283754;283755;283756;283757;283758;283759;283760;283761;283762;283763 283755 11 QVAASPAVGQPLQK Unmodified 1392.7725 0.77251325 3621 Q92547 TOPBP1 DNA topoisomerase 2-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 41.971 42.404 2 0.00077825 47695 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 63.694 48.756 45289000 0 0 0 0 0 6645500 0 0 0 7638700 8001500 8615400 0 0 14388000 43029 3621 38513 358949;358950;358951;358952;358953 283764;283765;283766 283764 3 QVAASTAQLLVACK Unmodified 1458.7864 0.78644876 5187;5201 Q9Y490;Q9Y4G6 TLN1;TLN2 Talin-1;Talin-2 no no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 66.044 65.697 2 1.2845E-14 74367 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 117.52 94.376 146130000 0 72767000 0 3022900 0 6283800 3217100 4157600 3897200 7030100 7272000 17356000 5911300 4637100 10576000 43030 5187;5201 38514 358954;358955;358956;358957;358958;358959;358960;358961;358962;358963;358964;358965;358966 283767;283768;283769;283770;283771;283772;283773;283774;283775;283776;283777;283778 283771 12 QVAAVGQEPQVFGR Unmodified 1484.7736 0.77357588 2098 Q03518 TAP1 Antigen peptide transporter 1 yes yes 0 0 0 By MS/MS 10 0 1 1 60.403 59.886 2 0.0019529 68840 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 64.439 33.253 3163000 0 0 0 0 3163000 0 0 0 0 0 0 0 0 0 0 43031 2098 38515 358967 283779 283779 1 QVAEAYEVLSDAK Unmodified 1421.7038 0.70382456 474 O75190;Q8WWF6 DNAJB6;DNAJB3 DnaJ homolog subfamily B member 6;DnaJ homolog subfamily B member 3 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 65.884 66.005 2 2.2341E-09 75585 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 112.13 75.432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43032 474 38516 358968;358969;358970;358971;358972;358973;358974 283780;283781;283782;283783;283784;283785;283786 283785 7 QVAEVEAQK Unmodified 1000.5189 0.51892433 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 14.115 14.148 2 0.0083679 13568 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 69.825 15.667 16016000 0 0 0 0 4507600 0 4458600 3967900 3082300 0 0 0 0 0 0 43033 2291 38517 358975;358976;358977;358978 283787;283788;283789;283790 283787 4 QVAFDFTK Unmodified 954.48108 0.48108226 2300 Q13492 PICALM Phosphatidylinositol-binding clathrin assembly protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 60.31 60.393 2 0.02128 69661 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 62.107 32.958 296780000 0 0 0 20762000 20334000 29179000 0 0 0 0 49896000 36827000 37429000 40182000 62176000 43034 2300 38518 358979;358980;358981;358982;358983;358984;358985;358986 283791;283792 283792 2 QVAGDAPVEQATAETASPVHR Unmodified 2133.0451 0.045059297 3657 Q92766 RREB1 Ras-responsive element-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.518 48.678 3 3.0897E-09 54802 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 71.535 62.281 131450000 0 0 0 9368700 9011600 9861300 9740200 8203300 8467200 12412000 12195000 15764000 8481500 12524000 15416000 43035 3657 38519 358987;358988;358989;358990;358991;358992;358993;358994;358995;358996;358997;358998 283793;283794;283795;283796;283797;283798;283799;283800;283801;283802;283803;283804;283805 283801 13 QVALAQGR Unmodified 841.477 0.47699993 5260 Q9Y613 FHOD1 FH1/FH2 domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 17.7 17.99 2 0.01661 18506 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.993 35.935 32184000 0 0 0 0 0 4609000 3533300 0 0 5423600 4760600 8063600 0 0 5793800 43036 5260 38520 358999;359000;359001;359002;359003;359004 283806;283807;283808;283809 283806 4 QVALLTNER Unmodified 1042.5771 0.57710791 4837 Q9UBD5 ORC3 Origin recognition complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 43.765 44.04 2 0.0094522 49553 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 66.692 40.09 90236000 0 0 0 0 0 11584000 15890000 10658000 0 12615000 19918000 19571000 0 0 0 43037 4837 38521 359005;359006;359007;359008;359009;359010;359011 283810;283811;283812;283813;283814;283815 283811 6 QVAPEKPVK Unmodified 994.58113 0.58113065 1730 P53999 SUB1 Activated RNA polymerase II transcriptional coactivator p15 yes yes 0 0 1 By MS/MS 3 0 1 1 14.339 10.872 2 0.047508 13914 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 94.806 58.237 92264000 0 92264000 0 0 0 0 0 0 0 0 0 0 0 0 0 43038 1730 38522 359012 283816 283816 0 QVAPEKPVKK Unmodified 1122.6761 0.67609367 1730 P53999 SUB1 Activated RNA polymerase II transcriptional coactivator p15 yes yes 0 0 2 By MS/MS 2 0 1 1 9.7261 5.9513 2 0.039101 10092 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 121.09 49.591 149590000 149590000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43039 1730 38523 359013 283817 283817 0 QVAQQEAER Unmodified 1057.5152 0.51523593 1343 P35232 PHB Prohibitin yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 6.8334 6.757 2 0.02741 4756 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 49.418 32.032 2952300 0 0 0 2094100 0 858190 0 0 0 0 0 0 0 0 0 43040 1343 38524 359014;359015 283818 283818 1 QVAQSEAEK Unmodified 988.48254 0.48253882 3536 Q8WU90 ZC3H15 Zinc finger CCCH domain-containing protein 15 yes yes 0 0 0 By MS/MS 10 0 1 1 27.366 27.688 2 0.03376 28674 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 67.032 26.929 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43041 3536 38525 359016 283819 283819 1 QVASFGSAAPPR Unmodified 1186.6095 0.60947067 4969 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 41.743 41.783 2 0.010808 46640 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 57.785 37.999 25610000 0 0 0 3046800 2924000 3261700 0 3753500 0 0 5515000 0 3760300 3348800 0 43042 4969 38526 359017;359018;359019;359020;359021;359022;359023;359024 283820;283821;283822;283823;283824;283825 283823 6 QVATALQNLQTK Unmodified 1313.7303 0.73031409 1073 P18206 VCL Vinculin yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 57.417 51.112 2 1.1145E-64 66449 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 213.8 168.91 267760000 74986000 192780000 0 0 0 0 0 0 0 0 0 0 0 0 0 43043 1073 38527 359025;359026;359027 283826;283827;283828;283829;283830 283828 5 QVCAGNTHFAVVTVEK Unmodified 1758.8723 0.87230365 3496 Q8TD19 NEK9 Serine/threonine-protein kinase Nek9 yes yes 0 0 0 By MS/MS 2 0 1 1 65.345 57.057 3 0.0052207 76783 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 39.143 30.346 4391600 4391600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43044 3496 38528 359028 283831 283831 1 QVCEIIESPLFLK Unmodified 1574.8378 0.83781563 3053 Q7L5N1 COPS6 COP9 signalosome complex subunit 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 89.137 88.466 2 4.5758E-07 101732 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 96.171 85.419 212790000 0 136530000 2665400 0 2582600 5989100 2235500 2667600 3092400 9050000 8339000 9276100 3976400 6383000 20004000 43045 3053 38529 359029;359030;359031;359032;359033;359034;359035;359036;359037;359038;359039;359040;359041;359042 283832;283833;283834;283835;283836;283837;283838;283839;283840;283841;283842;283843;283844;283845;283846 283842 15 QVCGDSIKPEETEQEVAADETR Unmodified 2490.118 0.11802582 3857 Q96GM8 TOE1 Target of EGR1 protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 50.521 50.208 3 2.8894E-16 57205 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 82.037 68.582 20142000 0 0 0 5057000 6696900 0 0 0 0 0 0 0 0 8388200 0 43046 3857 38530 359043;359044;359045 283847;283848;283849;283850 283850 4 QVCGDSIKPEETEQEVAADETRNLPHSK Unmodified 3166.4837 0.48368439 3857 Q96GM8 TOE1 Target of EGR1 protein 1 yes yes 0 0 2 By MS/MS 2 0 1 1 63.085 59.326 4 0.01133 73592 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 22.888 20.75 8368600 0 0 8368600 0 0 0 0 0 0 0 0 0 0 0 0 43047 3857 38531 359046 283851 283851 1 QVDAESWK Unmodified 961.45051 0.45051041 1209 P26639 TARS Threonine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 30.275 29.344 2 0.011137 37655 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.31 94.678 1649500000 33049000 1370300000 8256800 3572800 3285200 5207400 5448100 0 0 9915400 40007000 35726000 9626700 22901000 102180000 43048 1209 38532 359047;359048;359049;359050;359051;359052;359053;359054;359055;359056;359057;359058;359059 283852;283853;283854;283855;283856;283857;283858;283859;283860;283861;283862 283854 11 QVDLIDLVR Unmodified 1069.6132 0.61315906 4973 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 84.864 84.93 2 0.0041874 98130 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.639 66.339 146260000 0 0 0 8134400 11247000 18205000 8841800 10040000 10848000 13351000 10672000 10517000 10422000 11609000 22367000 43049 4973 38533 359060;359061;359062;359063;359064;359065;359066;359067;359068;359069;359070;359071 283863;283864;283865 283863 2 QVDLLSAEQMR Unmodified 1288.6445 0.64453555 103 CON__Q7Z794;Q7Z794 KRT77 Keratin, type II cytoskeletal 1b yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 67.247 67.277 2 1.2439E-20 77877 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 166.19 99.496 + 111740000 0 0 0 25297000 3770600 4227000 6282800 5526700 0 18851000 6616400 30169000 5765600 5238000 0 43050 103 38534 359072;359073;359074;359075;359076;359077;359078;359079;359080;359081 283866;283867;283868;283869;283870;283871;283872;283873;283874;283875;283876;283877;283878 283877 13 QVDLLSAEQMR Oxidation (M) 1304.6395 0.63945017 103 CON__Q7Z794;Q7Z794 KRT77 Keratin, type II cytoskeletal 1b yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 53.768 53.752 2 1.9088E-08 61939 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 150.61 130.28 + 212110000 0 0 0 79866000 17045000 0 23056000 17135000 0 36229000 0 38781000 0 0 0 43051 103 38534 359082;359083;359084;359085;359086;359087;359088 283879;283880;283881;283882;283883;283884;283885;283886;283887 283886 135 9 QVDLLSAEQMRQNAEVR Oxidation (M) 2001.9902 0.99018696 103 CON__Q7Z794;Q7Z794 KRT77 Keratin, type II cytoskeletal 1b yes no 0 1 1 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 54.469 54.406 3 0.00073571 61578 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 47.545 37.788 + 21894000 0 0 0 7155600 0 0 3608800 7381600 0 3747700 0 0 0 0 0 43052 103 38535 359089;359090;359091;359092 283888;283889 283888 135 2 QVDPAYTGR Unmodified 1005.488 0.48795855 4836 Q9UBC2 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 20.51 21.022 2 0.038908 21430 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 44.753 25.117 3187700 0 0 0 0 0 0 0 0 0 0 3187700 0 0 0 0 43053 4836 38536 359093;359094 283890;283891 283891 2 QVDQLTNDK Unmodified 1059.5197 0.51965261 870 P08670 VIM Vimentin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.219 16.395 2 3.9883E-14 15894 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 170.3 115.69 4237400000 0 0 0 201540000 199430000 270450000 304580000 215750000 286080000 372850000 454960000 523600000 470590000 409450000 528100000 43054 870 38537 359095;359096;359097;359098;359099;359100;359101;359102;359103;359104;359105;359106 283892;283893;283894;283895;283896;283897;283898;283899;283900;283901;283902;283903;283904;283905;283906;283907;283908;283909 283898 17 QVDSEHMHQNVPTEEQR Unmodified 2062.9127 0.91266492 1498 P46100 ATRX Transcriptional regulator ATRX yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 23.248 23.582 3 0.020294 23969 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 30.418 20.76 8973600 0 0 0 0 0 1391400 0 0 0 0 0 0 3267100 0 4315100 43055 1498 38538 359107;359108;359109 283910 283910 1 QVDYEINAHK Unmodified 1215.5884 0.58840088 2923 Q6P1Q9 METTL2B Methyltransferase-like protein 2B no no 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 31.796 27.739 2;3 0.0065059 36539 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.75 68.748 14536000 0 12394000 2142000 0 0 0 0 0 0 0 0 0 0 0 0 43056 2923 38539 359110;359111;359112 283911;283912;283913 283911 3 QVEDDIQQLLK Unmodified 1327.6983 0.69834526 1369 P35998 PSMC2 26S protease regulatory subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 80.139 79.02 2 1.2676E-20 91616 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 166.09 116.67 1590900000 17121000 810620000 6988300 49282000 41860000 58800000 26084000 29130000 19658000 135820000 116430000 162980000 31880000 28306000 55934000 43057 1369 38540 359113;359114;359115;359116;359117;359118;359119;359120;359121;359122;359123;359124;359125;359126;359127;359128;359129 283914;283915;283916;283917;283918;283919;283920;283921;283922;283923;283924;283925;283926;283927;283928;283929;283930 283915 17 QVEDFAMIPAK Unmodified 1247.622 0.62200919 4161 Q9BUI4 POLR3C DNA-directed RNA polymerase III subunit RPC3 yes yes 0 0 0 By MS/MS 2 0 1 1 75.424 70.484 2 0.02477 88284 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.17 58.93 84339000 0 84339000 0 0 0 0 0 0 0 0 0 0 0 0 0 43058 4161 38541 359130 283931 283931 0 QVEEALHQLHAR Unmodified 1429.7426 0.74261011 131 O00233 PSMD9 26S proteasome non-ATPase regulatory subunit 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 36.185 36.383 3 0.00058571 38680 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.944 46.921 84742000 0 0 0 2414400 2133400 5308200 0 3271500 0 6132800 10142000 16674000 6802600 8759400 23103000 43059 131 38542 359131;359132;359133;359134;359135;359136;359137;359138;359139;359140 283932;283933;283934;283935;283936;283937;283938;283939;283940 283934 9 QVEEIFNLK Unmodified 1118.5972 0.59717465 1977 P78347 GTF2I General transcription factor II-I yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 74.223 73.078 2 1.698E-06 91940 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 164.72 19.382 1526800000 17366000 394710000 12158000 72521000 69545000 107640000 58272000 66581000 60891000 129010000 110400000 112610000 104970000 86603000 123540000 43060 1977 38543 359141;359142;359143;359144;359145;359146;359147;359148;359149;359150;359151;359152;359153;359154;359155;359156 283941;283942;283943;283944;283945;283946;283947;283948;283949;283950;283951;283952;283953;283954;283955;283956;283957;283958 283944 15 QVEELAAEVQR Unmodified 1270.6517 0.65172941 3925 Q96MH2 HEXIM2 Protein HEXIM2 yes yes 0 0 0 By MS/MS 10 0 1 1 48.08 48.516 2 0.014477 54556 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 61.161 32.763 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43061 3925 38544 359157 283959 283959 1 QVEELFER Unmodified 1048.5189 0.51892433 1977 P78347 GTF2I General transcription factor II-I yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 53.313 53.428 2 0.0044044 59635 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 110.81 79.504 189180000 0 0 0 17507000 18128000 17406000 0 9395700 0 26402000 0 30162000 22185000 20662000 27327000 43062 1977 38545 359158;359159;359160;359161;359162;359163;359164;359165;359166;359167 283960;283961;283962;283963;283964;283965;283966;283967;283968;283969;283970;283971;283972;283973;283974;283975;283976 283969 17 QVEELFERK Unmodified 1176.6139 0.61388734 1977 P78347 GTF2I General transcription factor II-I yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44.369 43.229 3 0.0016539 47736 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 74.267 58.129 1300500000 55965000 14750000 45707000 101840000 70394000 101350000 85751000 75112000 75820000 135060000 0 139820000 130980000 100860000 167090000 43063 1977 38546 359168;359169;359170;359171;359172;359173;359174;359175;359176;359177;359178;359179;359180;359181 283977;283978;283979;283980;283981;283982;283983;283984;283985 283978 4 QVEGMEDWK Oxidation (M) 1136.4808 0.48082426 1185 P25311 AZGP1 Zinc-alpha-2-glycoprotein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 25.889 26.071 2 0.003409 27630 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 81.296 67.3 51245000 0 0 0 14885000 3929100 4043400 3583800 0 0 7045600 0 7471400 3815900 3231900 3239800 43064 1185 38547 359182;359183;359184;359185;359186;359187;359188;359189;359190 283986;283987;283988;283989;283990 283988 1717 5 QVEGMEDWK Unmodified 1120.4859 0.48590964 1185 P25311 AZGP1 Zinc-alpha-2-glycoprotein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 44.516 44.403 2 0.0032698 50187 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 106.68 76.179 60963000 0 0 0 38107000 0 11163000 0 11693000 0 0 0 0 0 0 0 43065 1185 38547 359191;359192;359193 283991;283992;283993;283994;283995;283996 283993 6 QVEGMEDWKQDSQLQK Oxidation (M) 1963.8946 0.89455524 1185 P25311 AZGP1 Zinc-alpha-2-glycoprotein yes yes 0 1 1 By MS/MS 10 0 1 1 39.178 38.684 3 0.00019963 43486 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 61.444 50.976 8695500 0 0 0 8695500 0 0 0 0 0 0 0 0 0 0 0 43066 1185 38548 359194 283997 283997 1717 1 QVEHPLLSGLLYPGLQALDEEYLK Unmodified 2724.4374 0.43743311 1740 P54577 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS 3 0 1 1 99.206 95.855 3 0.0010299 114898 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 38.237 35.652 5865000 0 5865000 0 0 0 0 0 0 0 0 0 0 0 0 0 43067 1740 38549 359195 283998;283999 283998 2 QVEIAQR Unmodified 842.46102 0.46101552 737 P00966 ASS1 Argininosuccinate synthase yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.3 2.25 2 21 1 1 2 1 2 2 2 2 1 2 2 1 2 2 17.536 17.353 2 0.017142 16202 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 114.54 39.229 1522200000 10423000 170830000 0 71791000 25679000 66373000 64846000 50283000 43218000 45987000 209860000 194880000 44743000 100240000 423070000 43068 737 38550 359196;359197;359198;359199;359200;359201;359202;359203;359204;359205;359206;359207;359208;359209;359210;359211;359212;359213;359214;359215;359216;359217;359218 284000;284001;284002;284003;284004;284005;284006 284005 7 QVEIAQREGAK Unmodified 1227.6571 0.65714914 737 P00966 ASS1 Argininosuccinate synthase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.22 0.416 7 2 2 4 3 19.556 16.02 2;3 8.3639E-292 21235 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 320.68 258.13 6786600000 1193800000 1920000000 3672800000 0 0 0 0 0 0 0 0 0 0 0 0 43069 737 38551 359219;359220;359221;359222;359223;359224;359225;359226;359227 284007;284008;284009;284010;284011;284012;284013;284014;284015;284016;284017 284009 9 QVELELQQIEQK Unmodified 1483.7882 0.7882229 3310 Q8N1B4 VPS52 Vacuolar protein sorting-associated protein 52 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 71.683 71.37 2 3.9447E-05 81488 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 99.568 74.713 77218000 0 27546000 0 2674800 2539300 4745600 3270400 3401500 2414200 4099900 5529600 5378300 4156300 3550000 7911700 43070 3310 38552 359228;359229;359230;359231;359232;359233;359234;359235;359236;359237;359238;359239;359240 284018;284019;284020;284021;284022;284023;284024;284025;284026;284027;284028;284029 284022 11 QVELQEER Unmodified 1029.5091 0.50908792 4199 Q9BW19 KIFC1 Kinesin-like protein KIFC1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 22.621 22.83 2 0.013643 23810 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 71.877 5.4482 32731000 0 0 0 2122600 1932800 3204700 2863400 0 1893100 2632100 2889200 4401400 3458400 3296100 4037500 43071 4199 38553 359241;359242;359243;359244;359245;359246;359247;359248;359249;359250;359251 284030;284031;284032;284033;284034;284035;284036;284037 284030 8 QVELQEERR Unmodified 1185.6102 0.61019895 4199 Q9BW19 KIFC1 Kinesin-like protein KIFC1 yes yes 0 0 1 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 16.878 16.984 3 0.026448 16941 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 36.424 10.307 50996000 0 0 0 3529100 4054900 6022900 7413400 4554800 3599000 0 0 8791300 7589900 5440500 0 43072 4199 38554 359252;359253;359254;359255;359256;359257;359258;359259;359260 284038 284038 1 QVENAGAIGPSR Unmodified 1197.6102 0.61019895 4898 Q9UHD8 SEPT9 Septin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 25.374 25.613 2 0.00085432 27265 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 111.27 77.177 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43073 4898 38555 359261;359262;359263;359264;359265;359266;359267;359268;359269;359270;359271 284039;284040;284041;284042;284043;284044;284045;284046;284047;284048;284049 284040 11 QVENAGAIGPSRFGLK Unmodified 1642.8791 0.87910359 4898 Q9UHD8 SEPT9 Septin-9 yes yes 0 0 1 By MS/MS 2 0 1 1 71.191 62.925 3 0.020603 83836 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.305 39.26 3662500 3662500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43074 4898 38556 359272 284050 284050 1 QVEPLDPPAGSAPGEHVFVK Unmodified 2073.0531 0.053104788 1740 P54577 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.452 69.526 3 5.9991E-06 79618 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 62.966 59.305 310780000 0 0 0 11345000 9382600 23506000 15220000 12081000 12854000 24538000 39196000 33205000 15976000 31031000 82444000 43075 1740 38557 359273;359274;359275;359276;359277;359278;359279;359280;359281;359282;359283;359284 284051;284052;284053;284054;284055;284056;284057;284058;284059;284060;284061;284062;284063;284064 284056 14 QVEQLEK Unmodified 872.46035 0.46034682 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 14.023 14.202 2 0.03177 12792 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 121.52 33.167 69873000 0 0 0 2838400 4351700 4435400 0 2227200 4092800 8543500 10380000 10675000 3595900 6585800 12147000 43076 2378 38558 359285;359286;359287;359288;359289;359290;359291;359292;359293;359294;359295 284065 284065 0 QVESAELK Unmodified 902.47091 0.4709115 5278 Q9Y6D9 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 16.507 16.719 2 0.011374 15278 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 77.072 16.312 96647000 0 0 0 4696000 4953200 7234700 0 0 0 0 15761000 13574000 12973000 15084000 22371000 43077 5278 38559 359296;359297;359298;359299;359300;359301;359302;359303 284066;284067 284067 2 QVEVELLSR Unmodified 1071.5924 0.59242362 3845 Q96G23 CERS2 Ceramide synthase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 62.611 62.802 2 0.0071339 71490 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.233 34.271 38913000 0 0 0 0 3475600 0 0 3973100 2493600 6308600 5896700 7348400 5504900 0 3911900 43078 3845 38560 359304;359305;359306;359307;359308;359309;359310;359311 284068;284069;284070;284071 284070 4 QVEVINFGDCLVR Unmodified 1547.7766 0.77661235 1495 P46060 RANGAP1 Ran GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 83.367 83.286 2 0.00072561 96801 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 87.298 69.862 9598600 0 0 0 0 3925000 0 0 0 0 0 0 0 5673600 0 0 43079 1495 38561 359312;359313;359314 284072;284073;284074 284073 3 QVEVLAENIQDTK Unmodified 1485.7675 0.76748745 3958 Q96QE3 ATAD5 ATPase family AAA domain-containing protein 5 yes yes 0 0 0 By MS/MS 10 0 1 1 48.54 48.975 2 0.042168 54844 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 31.494 0 69863000 0 0 0 0 0 0 0 0 0 0 69863000 0 0 0 0 43080 3958 38562 359315 284075 284075 1 QVEYLVNEK Unmodified 1120.5764 0.57643921 1049 P17174 GOT1 Aspartate aminotransferase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.12 3.72 2 1 5 1 2 1 1 1 1 1 43.209 41.188 2 0.0034625 45231 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 106.6 80.185 579270000 8645600 509700000 0 3793500 0 0 0 0 0 0 10742000 11987000 0 8035300 26370000 43081 1049 38563 359316;359317;359318;359319;359320;359321;359322;359323 284076;284077;284078;284079;284080;284081;284082;284083;284084 284077 8 QVFAENK Unmodified 834.42357 0.42356738 974 P13010 XRCC5 X-ray repair cross-complementing protein 5 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 15.163 15.218 2 0.046674 13830 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 65.803 24.883 59983000 0 0 0 0 4511500 12923000 10634000 5576800 9469400 0 0 0 0 16868000 0 43082 974 38564 359324;359325;359326;359327;359328;359329 284085 284085 1 QVFDQYVK Unmodified 1025.5182 0.51819605 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 50.275 49.84 2 0.0076113 56172 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 89.046 60.148 1050600000 0 171090000 0 90340000 0 69890000 93386000 96281000 89738000 90852000 108230000 142810000 98033000 0 0 43083 213 38565 359330;359331;359332;359333;359334;359335;359336;359337;359338;359339 284086;284087;284088;284089;284090;284091;284092 284090 3 QVFEGQNR Unmodified 976.47264 0.47264284 1563 P49257 LMAN1 Protein ERGIC-53 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 15.394 15.616 2 0.0090656 14270 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 84.097 43.525 154670000 0 0 0 9727800 9433000 0 0 0 0 16311000 20775000 24586000 21579000 23836000 28426000 43084 1563 38566 359340;359341;359342;359343;359344;359345;359346;359347 284093;284094;284095 284094 3 QVFGEATK Unmodified 878.44978 0.44978213 839 P07339 CTSD Cathepsin D;Cathepsin D light chain;Cathepsin D heavy chain yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 21.778 21.944 2 0.01012 21646 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.684 30.659 351080000 0 0 0 158190000 16359000 21795000 11617000 31098000 9280300 24552000 29674000 0 16192000 18305000 14014000 43085 839 38567 359348;359349;359350;359351;359352;359353;359354;359355;359356;359357;359358 284096;284097;284098 284096 3 QVFGTHTTQK Unmodified 1145.5829 0.58292157 2072 Q02241 KIF23 Kinesin-like protein KIF23 yes yes 0 0 0 By MS/MS By MS/MS 2 0 4 2 2 17.119 13.757 2;3 0.0075828 20240 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.906 32.839 76772000 58132000 0 18640000 0 0 0 0 0 0 0 0 0 0 0 0 43086 2072 38568 359359;359360;359361;359362 284099;284100;284101;284102 284101 3 QVFLATWK Unmodified 991.5491 0.54910224 1937 P63010 AP2B1 AP-2 complex subunit beta yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 73.202 73.2 2 0.036499 83551 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 51.854 31.858 95215000 0 0 0 8217300 7231000 12260000 0 9324700 9990700 14118000 11355000 0 10542000 12176000 0 43087 1937 38569 359363;359364;359365;359366;359367;359368;359369;359370;359371 284103 284103 1 QVFQQTISCPEGLR Unmodified 1661.8195 0.8195398 2422 Q14653 IRF3 Interferon regulatory factor 3 yes yes 0 0 0 By MS/MS 10 0 1 1 65.525 66.062 2 0.0036696 75013 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.385 39.904 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43088 2422 38570 359372 284104 284104 1 QVFTSEK Unmodified 837.42323 0.42323303 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 17.704 14.165 2 0.022277 18520 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.59 58.833 187310000 0 187310000 0 0 0 0 0 0 0 0 0 0 0 0 0 43089 3641 38571 359373;359374 284105;284106 284105 2 QVGDIFSNPETVLAK Unmodified 1616.841 0.84098675 160 O00471 EXOC5 Exocyst complex component 5 yes yes 0 0 0 By MS/MS 2 0 1 1 87.174 82.365 2 7.908E-07 102297 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.17 72.841 68499000 0 68499000 0 0 0 0 0 0 0 0 0 0 0 0 0 43090 160 38572 359375 284107;284108 284108 2 QVGETSAPGDTLDGTPR Unmodified 1699.8013 0.80130678 4778 Q9NZN5 ARHGEF12 Rho guanine nucleotide exchange factor 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 42.356 42.525 2 0.0002563 47287 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 76.073 61.915 47280000 0 0 0 3735100 3117500 5500100 3508000 2391300 2962600 5183100 4683100 7046700 3584800 0 5567500 43091 4778 38573 359376;359377;359378;359379;359380;359381;359382;359383;359384;359385;359386 284109;284110;284111;284112;284113;284114 284111 6 QVGSGVTTDQVQAEAK Unmodified 1616.8006 0.8005785 750 P01871 IGHM Ig mu chain C region yes yes 0 0 0 By MS/MS 10 0 1 1 35.435 35.596 2 0.00020073 39090 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 71.548 56.576 28766000 0 0 0 0 0 0 0 28766000 0 0 0 0 0 0 0 43092 750 38574 359387 284115 284115 1 QVGVGYVDSIQR Unmodified 1319.6834 0.68336389 1474 P43246 MSH2 DNA mismatch repair protein Msh2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 56.708 56.779 2 0.0014569 64381 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 67.726 52.064 104860000 0 0 0 5909300 7791500 13894000 7427600 0 5556300 12528000 17899000 0 10219000 10360000 13278000 43093 1474 38575 359388;359389;359390;359391;359392;359393;359394;359395;359396;359397 284116;284117;284118;284119;284120;284121 284117 6 QVGVGYVDSIQRK Unmodified 1447.7783 0.77832691 1474 P43246 MSH2 DNA mismatch repair protein Msh2 yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 17 2 1 1 2 2 2 1 1 2 2 1 47.827 47.999 2;3 0.0077377 53823 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 36.631 24.716 274440000 0 0 0 24247000 0 5521700 5000900 25831000 19650000 55990000 51026000 7175900 38356000 32889000 8750300 43094 1474 38576 359398;359399;359400;359401;359402;359403;359404;359405;359406;359407;359408;359409;359410;359411;359412;359413;359414 284122;284123;284124;284125;284126;284127 284122 3 QVGVNPTSIDSVVIGK Unmodified 1611.8832 0.88318591 3069 Q7Z2E3 APTX Aprataxin yes yes 0 0 0 By MS/MS 2 0 1 1 82.621 77.917 2 2.7501E-16 96837 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 142.97 113.3 36208000 0 36208000 0 0 0 0 0 0 0 0 0 0 0 0 0 43095 3069 38577 359415 284128 284128 1 QVHCEEFIPEFEK Unmodified 1690.7661 0.76610724 2384 Q14166 TTLL12 Tubulin--tyrosine ligase-like protein 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 70.95 69.783 2;3 7.8774E-07 91831 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.868 72.804 212650000 20431000 73670000 49163000 2169500 1488800 12456000 2226100 2750400 2269800 6149000 7152400 9992300 3222100 4903800 14602000 43096 2384 38578 359416;359417;359418;359419;359420;359421;359422;359423;359424;359425;359426;359427;359428;359429;359430;359431;359432 284129;284130;284131;284132;284133;284134 284132 5 QVHPDTGISSK Unmodified 1167.5884 0.58840088 432;833 Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;P57053;O60814;Q96A08;Q8N257;Q16778;P33778;P23527;P06899 HIST1H2BL;HIST1H2BM;HIST1H2BN;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;H2BFS;HIST1H2BK;HIST1H2BA;HIST3H2BB;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 1-A;Histone H2B type 3-B;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.3 3.2 4 2 21 1 4 1 2 2 2 2 2 2 2 2 1 2 1 1 14.603 13.933 2;3 1.6957E-07 17261 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 126.31 98.431 2947200000 56150000 1158600000 103560000 230800000 117320000 132050000 123900000 95941000 79957000 174670000 155680000 130160000 182240000 76201000 130000000 43097 432;833 38579 359433;359434;359435;359436;359437;359438;359439;359440;359441;359442;359443;359444;359445;359446;359447;359448;359449;359450;359451;359452;359453;359454;359455;359456;359457;359458;359459 284135;284136;284137;284138;284139;284140;284141;284142;284143;284144;284145;284146;284147;284148;284149;284150;284151;284152;284153;284154;284155;284156;284157;284158;284159;284160;284161 284147 15 QVHPFHVYPQPGMQR Unmodified 1819.894 0.89404215 694 O95817 BAG3 BAG family molecular chaperone regulator 3 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 49.631 50.098 4 0.0032744 55413 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.621 32.215 22205000 0 0 0 0 0 0 0 0 0 0 0 0 0 4082700 18122000 43098 694 38580 359460;359461 284162 284162 1 QVHSTERPFK Unmodified 1227.636 0.63601977 1781 P56270 MAZ Myc-associated zinc finger protein yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 11.219 11.357 3 0.027402 9399 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.461 33.716 103220000 0 0 0 0 6644500 10944000 11529000 8545700 9664400 14521000 13223000 0 598070 0 27551000 43099 1781 38581 359462;359463;359464;359465;359466;359467;359468;359469;359470 284163;284164 284163 1 QVIAGVGALEQEHAQYK Unmodified 1839.9479 0.94791144 2420 Q14644 RASA3 Ras GTPase-activating protein 3 yes yes 0 0 0 By MS/MS 2 0 1 1 66.148 62.395 3 0.0054979 77343 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 39.685 28.897 4528900 0 0 4528900 0 0 0 0 0 0 0 0 0 0 0 0 43100 2420 38582 359471 284165;284166 284166 2 QVIDVLETDK Unmodified 1158.6132 0.61321864 1992 P80303 NUCB2 Nucleobindin-2;Nesfatin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.64 2.9 1 1 9 2 1 1 1 1 1 1 1 1 1 62.162 61.262 2 0.0054644 69634 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 68.846 40.672 133470000 0 86035000 0 3122200 3263600 2571400 3379800 0 0 0 7264900 8435100 5623800 5694000 8082300 43101 1992 38583 359472;359473;359474;359475;359476;359477;359478;359479;359480;359481;359482 284167;284168;284169;284170;284171 284171 3 QVIEYAR Unmodified 877.46577 0.46576654 1544 P48556 PSMD8 26S proteasome non-ATPase regulatory subunit 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 29.076 28.86 2 0.02336 31274 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 89.369 48.517 451080000 0 49564000 0 0 37630000 43761000 18985000 16491000 17277000 55552000 72500000 84091000 0 22059000 33165000 43102 1544 38584 359483;359484;359485;359486;359487;359488;359489;359490;359491;359492;359493 284172;284173;284174;284175 284172 4 QVIHPGLQEVGLK Unmodified 1416.8089 0.80889876 3241 Q8IWI9 MGA MAX gene-associated protein yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 67.842 61.821 3 0.0069155 82798 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.088 39.443 44991000 40672000 0 4319500 0 0 0 0 0 0 0 0 0 0 0 0 43103 3241 38585 359494;359495 284176;284177 284177 2 QVIINLINQK Unmodified 1181.7132 0.71320746 4635 Q9NTJ5 SACM1L Phosphatidylinositide phosphatase SAC1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 74.846 74.847 2 0.022642 86874 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 45.972 9.2119 26959000 0 0 0 2298500 2122600 3647400 2357600 2493700 0 3246000 4204100 0 2790300 3798500 0 43104 4635 38586 359496;359497;359498;359499;359500;359501;359502;359503;359504 284178;284179 284178 2 QVIINLVDQAGREK Unmodified 1581.8839 0.88385462 5102 Q9Y2H2 INPP5F Phosphatidylinositide phosphatase SAC2 yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 69.588 69.914 3 0.038367 79617 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 28.779 19.958 8905700 0 0 0 0 0 0 0 0 0 0 0 0 0 2756900 6148700 43105 5102 38587 359505;359506 284180 284180 1 QVIIQGFR Unmodified 959.55525 0.55525025 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 2 1 1 1 1 1 2 1 58.635 58.821 2 0.0046189 66258 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 129.96 101.45 163270000 0 0 0 0 8986900 16234000 11347000 15791000 9096300 16576000 17768000 17626000 12590000 14052000 23201000 43106 5071 38588 359507;359508;359509;359510;359511;359512;359513;359514;359515;359516;359517;359518;359519 284181;284182;284183;284184;284185;284186;284187;284188;284189 284187 6 QVIQGLEALK Unmodified 1097.6445 0.64445919 2143 Q07866 KLC1 Kinesin light chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70.943 68.188 2 0.002807 78428 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 79.906 29.3 106480000 5304800 57582000 2027000 9009800 0 0 0 13325000 0 0 0 0 0 0 19227000 43107 2143 38589 359520;359521;359522;359523;359524;359525;359526;359527;359528;359529;359530;359531;359532;359533;359534 284190;284191;284192;284193;284194;284195;284196;284197;284198;284199;284200;284201;284202;284203;284204;284205;284206 284205 17 QVIQTPLADSLPVSR Unmodified 1622.8992 0.89917033 634 O95248 SBF1 Myotubularin-related protein 5 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 79.391 79.301 2 5.3693E-05 91741 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 73.848 48.462 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43108 634 38590 359535;359536 284207;284208 284208 2 QVISLQTK Unmodified 915.53893 0.53893149 1694 P52701 MSH6 DNA mismatch repair protein Msh6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38.929 38.031 2 0.012181 48710 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.75 27.006 490860000 18247000 184250000 3592200 14940000 13877000 29788000 20702000 27213000 12543000 31495000 33808000 24180000 32949000 15353000 27928000 43109 1694 38591 359537;359538;359539;359540;359541;359542;359543;359544;359545;359546;359547;359548;359549;359550;359551 284209;284210;284211;284212;284213 284210 4 QVISTGIQPHGETAAK Unmodified 1635.858 0.8580338 2576 Q15776 ZKSCAN8 Zinc finger protein with KRAB and SCAN domains 8 yes yes 0 0 0 By MS/MS 10 0 1 1 35.862 35.41 3 0.0016191 39371 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 47.545 35.569 3260300 0 0 0 0 3260300 0 0 0 0 0 0 0 0 0 0 43110 2576 38592 359552 284214 284214 1 QVITPGEGIAQSAK Unmodified 1397.7514 0.75144346 5000 Q9ULM3 YEATS2 YEATS domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.53 2.94 1 2 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 48.999 48.056 2 0.0015347 61519 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.188 37.854 151600000 294660 46017000 0 7204900 10822000 9563000 5398200 5938300 5199400 15059000 14214000 14841000 5611900 5367900 6068900 43111 5000 38593 359553;359554;359555;359556;359557;359558;359559;359560;359561;359562;359563;359564;359565;359566;359567 284215;284216;284217;284218;284219;284220;284221;284222;284223 284216 9 QVLALQSQLADTK Unmodified 1413.7827 0.78274359 1357 P35580 MYH10 Myosin-10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 66.336 66.271 2 0.0077707 76337 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 46.844 30.706 9404900 0 0 0 0 2989100 0 0 2438000 0 3977800 0 0 0 0 0 43112 1357 38594 359568;359569;359570 284224;284225 284225 2 QVLDNLTMEK Oxidation (M) 1205.5962 0.59618837 1354 P35527;CON__P35527 KRT9 Keratin, type I cytoskeletal 9 yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 55 5 9 4 3 10 3 4 4 4 5 3 1 49.976 50.022 2 2.5833E-32 53260 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 182.39 148.22 + 21676000000 0 0 0 2609700000 1441800000 1421200000 1008300000 5072500000 983010000 2205500000 1695200000 1760400000 2158100000 776760000 543590000 43113 1354 38595 359571;359572;359573;359574;359575;359576;359577;359578;359579;359580;359581;359582;359583;359584;359585;359586;359587;359588;359589;359590;359591;359592;359593;359594;359595;359596;359597;359598;359599;359600;359601;359602;359603;359604;359605;359606;359607;359608;359609;359610;359611;359612;359613;359614;359615;359616;359617;359618;359619;359620;359621;359622;359623;359624;359625 284226;284227;284228;284229;284230;284231;284232;284233;284234;284235;284236;284237;284238;284239;284240;284241;284242;284243;284244;284245;284246;284247;284248;284249;284250;284251;284252;284253;284254;284255;284256;284257;284258;284259;284260;284261;284262;284263;284264;284265;284266;284267;284268;284269;284270;284271;284272;284273;284274;284275;284276;284277;284278 284236 2060 52 QVLDNLTMEK Unmodified 1189.6013 0.60127375 1354 P35527;CON__P35527 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 2 1 1 1 1 1 1 1 1 1 56.796 56.916 2 1.1153E-23 64011 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 176.38 132.03 + 14583000000 0 0 0 1347000000 943460000 1248600000 419870000 3988900000 464370000 1223700000 1171500000 1510200000 1138800000 521630000 605200000 43114 1354 38595 359626;359627;359628;359629;359630;359631;359632;359633;359634;359635;359636;359637;359638 284279;284280;284281;284282;284283;284284;284285;284286;284287;284288;284289;284290;284291;284292;284293;284294;284295;284296;284297;284298;284299;284300;284301;284302 284297 24 QVLEDSPAGK Unmodified 1042.5295 0.52948901 3466 Q8NI35 INADL InaD-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 23.741 21.723 2 0.015626 27722 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.224 41.261 8493300 0 6348900 0 0 0 0 0 2144300 0 0 0 0 0 0 0 43115 3466 38596 359639;359640;359641 284303;284304;284305 284304 3 QVLENNQANLASK Unmodified 1427.7369 0.73685603 1389 P37275 ZEB1 Zinc finger E-box-binding homeobox 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS 10 0 5 1 1 1 1 1 33.213 33.137 2 0.0041523 36947 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 51.092 32.312 12250000 0 0 0 3547600 0 0 4469200 0 4232900 0 0 0 0 0 0 43116 1389 38597 359642;359643;359644;359645;359646 284306;284307;284308 284307 3 QVLEPSFR Unmodified 974.51853 0.5185304 1211 P26641 EEF1G Elongation factor 1-gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 2 1 1 1 1 1 1 50.289 50.443 2 0.0044044 56927 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 110.81 66.413 899080000 0 0 0 43750000 39176000 101950000 52700000 53164000 25711000 91622000 124370000 61545000 55117000 89309000 160670000 43117 1211 38598 359647;359648;359649;359650;359651;359652;359653;359654;359655;359656;359657;359658;359659 284309;284310;284311;284312;284313;284314;284315;284316;284317;284318;284319;284320;284321;284322 284311 14 QVLFTPATQAAR Unmodified 1301.7092 0.70918471 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 57.389 57.54 2 0.0323 64984 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 36.585 28.66 39789000 0 0 0 0 5488600 0 0 0 0 9710500 10413000 14177000 0 0 0 43118 2775 38599 359660;359661;359662;359663 284323;284324;284325;284326 284325 4 QVLGLGVNGK Unmodified 983.57638 0.57637963 2622 Q16644 MAPKAPK3 MAP kinase-activated protein kinase 3 yes yes 0 0 0 By MS/MS 2 0 1 1 57.216 49.035 2 0.0038415 66824 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 92.47 18.169 18282000 18282000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43119 2622 38600 359664 284327 284327 1 QVLGQMVIDEELLGDGHSYSPR Oxidation (M) 2458.1798 0.17983822 1229 P28070 PSMB4 Proteasome subunit beta type-4 yes yes 0 1 0 By MS/MS 10 0 1 1 81.929 82.131 3 2.0703E-10 94617 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.76 59.16 10814000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10814000 43120 1229 38601 359665 284328 284328 1821 1 QVLHPEASRK Unmodified 1163.6411 0.64110515 4424 Q9H6T0 ESRP2 Epithelial splicing regulatory protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.6918 7.819 3 0.028638 5605 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 33.875 11.234 68595000 0 0 0 2740900 2708000 3327900 4670300 4419400 3024300 6145300 14291000 7059900 5756500 5669900 8780900 43121 4424 38602 359666;359667;359668;359669;359670;359671;359672;359673;359674;359675;359676;359677 284329 284329 1 QVLLEIFSK Unmodified 1075.6277 0.6277465 4683 Q9NVU0 POLR3E DNA-directed RNA polymerase III subunit RPC5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 85.204 85.329 2 0.04445 98561 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.442 23.665 11706000 0 0 0 0 0 3288700 0 0 2100600 2383900 0 0 0 0 3933100 43122 4683 38603 359678;359679;359680;359681 284330 284330 1 QVLLGDQIPK Unmodified 1109.6445 0.64445919 1230 P28072 PSMB6 Proteasome subunit beta type-6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.951 62.05 2 0.0014272 70791 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 91.867 82.086 349930000 0 0 0 23809000 8634100 9962800 9536500 15777000 5134200 11108000 59260000 41200000 9184400 28904000 127420000 43123 1230 38604 359682;359683;359684;359685;359686;359687;359688;359689;359690;359691;359692;359693 284331;284332;284333;284334;284335 284333 5 QVLLHQQAK Unmodified 1063.6138 0.61382777 764 P02788 LTF Lactotransferrin;Lactoferricin-H;Kaliocin-1;Lactoferroxin-A;Lactoferroxin-B;Lactoferroxin-C yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 14.939 15.136 2 0.012835 14908 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 60.709 39.409 10646000 0 0 0 0 0 0 0 0 0 7354400 0 0 3291300 0 0 43124 764 38605 359694;359695 284336;284337 284337 2 QVLLSEPEEAAALYR Unmodified 1687.8781 0.87810054 987 P13798 APEH Acylamino-acid-releasing enzyme yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 2 1 1 1 2 79.604 79.776 2;3 9.9004E-19 91873 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 106.67 99.405 62881000 0 0 0 0 0 0 0 0 0 0 9859900 11169000 2894100 4987600 33971000 43125 987 38606 359696;359697;359698;359699;359700;359701;359702 284338;284339;284340;284341;284342;284343 284338 5 QVLLVGAPTYDDVSK Unmodified 1603.8457 0.84573777 1989 P80108 GPLD1 Phosphatidylinositol-glycan-specific phospholipase D yes yes 0 0 0 By MS/MS 10 0 1 1 75.634 75.114 2 0.0013109 87169 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 55.314 38.094 2617100 0 0 0 2617100 0 0 0 0 0 0 0 0 0 0 0 43126 1989 38607 359703 284344 284344 1 QVLNQDLTFQHIK Unmodified 1582.8467 0.84674083 2827 Q5VWZ2 LYPLAL1 Lysophospholipase-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 71.945 66.039 3 1.6409E-13 87309 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 111.93 99.771 59094000 53131000 0 5963000 0 0 0 0 0 0 0 0 0 0 0 0 43127 2827 38608 359704;359705 284345 284345 1 QVLQLQASHRESEEALQK Unmodified 2093.0865 0.086530182 4817 Q9P2E9 RRBP1 Ribosome-binding protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 53.146 45.131 3 0.0098357 62061 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 37.042 20.679 5968800 5968800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43128 4817 38609 359706 284346;284347 284347 2 QVLRNDAK Unmodified 942.52468 0.52467841 2945 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 7.4125 4.5462 2 0.025659 6218 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 148.04 45.27 220250000 198610000 0 21635000 0 0 0 0 0 0 0 0 0 0 0 0 43129 2945 38610 359707;359708 284348;284349 284349 2 QVLSGSGESVTK Unmodified 1190.6143 0.61428128 5045 Q9UNY4 TTF2 Transcription termination factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 24.976 25.169 2 0.0045023 27173 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 57.347 26.274 20873000 0 0 0 0 2783200 4485600 2938700 0 0 0 4514700 3732800 0 2418200 0 43130 5045 38611 359709;359710;359711;359712;359713;359714;359715;359716 284350;284351;284352;284353;284354;284355 284355 6 QVLVAPGNAGTACSEK Unmodified 1600.7879 0.78790532 1134 P22102 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 42.097 41.066 2 7.8769E-42 44935 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 160.15 154.05 1050400000 28702000 727510000 0 12356000 10424000 27541000 16601000 15732000 9313200 26196000 31025000 32008000 20061000 25599000 67337000 43131 1134 38612 359717;359718;359719;359720;359721;359722;359723;359724;359725;359726;359727;359728;359729;359730;359731 284356;284357;284358;284359;284360;284361;284362;284363;284364;284365;284366;284367;284368;284369;284370;284371 284360 16 QVMMFSATLSK 2 Oxidation (M) 1273.6046 0.60464457 2347 Q13838 DDX39B Spliceosome RNA helicase DDX39B yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 48.27 47.072 2 0.00011087 53147 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 96.89 79.026 65027000 22671000 0 0 0 0 14962000 0 3877800 3069800 10813000 0 0 9633700 0 0 43132 2347 38613 359732;359733;359734;359735;359736;359737;359738 284372;284373;284374;284375;284376 284373 3828;3829 4 QVMMFSATLSK Unmodified 1241.6148 0.61481532 2347 Q13838 DDX39B Spliceosome RNA helicase DDX39B yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 8 3.46 1 3 1 1 1 1 75.791 73.866 2 0.0070028 94959 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.533 53.178 60845000 51753000 0 0 0 0 1670000 0 0 0 2350600 0 0 0 0 5070700 43133 2347 38613 359739;359740;359741;359742 284377;284378;284379 284379 3 QVMMFSATLSK Oxidation (M) 1257.6097 0.60972994 2347 Q13838 DDX39B Spliceosome RNA helicase DDX39B yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 2 1 1 1 1 1 2 1 65.746 63.988 2 6.0137E-06 84252 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 119.53 101.3 132400000 91686000 0 0 2662700 0 9942800 5221300 0 0 6243300 6133700 0 0 3742500 6766300 43134 2347 38613 359743;359744;359745;359746;359747;359748;359749;359750;359751;359752 284380;284381;284382;284383;284384;284385;284386;284387;284388;284389;284390;284391 284385 3828;3829 11 QVMVVPVGPTCDEYAQK Oxidation (M) 1935.907 0.90703418 1209 P26639 TARS Threonine--tRNA ligase, cytoplasmic yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 63.123 63.41 2 3.1E-32 72319 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 123.8 114.61 146080000 0 0 0 0 0 0 5060900 0 0 6713600 28253000 30189000 5922300 22429000 47516000 43135 1209 38614 359753;359754;359755;359756;359757;359758;359759 284392;284393;284394;284395;284396;284397;284398 284395 1772 7 QVMVVPVGPTCDEYAQK Unmodified 1919.9121 0.91211956 1209 P26639 TARS Threonine--tRNA ligase, cytoplasmic yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 72.271 72.553 2 1.2619E-13 82854 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.191 84.14 76286000 0 0 0 0 0 0 0 0 0 0 18178000 11553000 0 13359000 33196000 43136 1209 38614 359760;359761;359762;359763 284399;284400;284401 284399 3 QVNMELAK Unmodified 931.4797 0.47970205 397 O60341 KDM1A Lysine-specific histone demethylase 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.232 34.415 2 0.029371 37809 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 56.177 28.472 198880000 0 0 0 10208000 10794000 17828000 13531000 15970000 12636000 17013000 22465000 19079000 12926000 16271000 30155000 43137 397 38615 359764;359765;359766;359767;359768;359769;359770;359771;359772;359773;359774;359775 284402 284402 1 QVNQISGAHNTSDK Unmodified 1497.7172 0.71718322 4769 Q9NZJ0 DTL Denticleless protein homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 9.6614 9.7939 2;3 9.9002E-05 8828 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 75.669 70.167 161280000 0 0 0 11995000 9399100 9056700 13073000 8946300 7289700 11401000 28178000 20669000 11938000 10445000 18885000 43138 4769 38616 359776;359777;359778;359779;359780;359781;359782;359783;359784;359785;359786;359787;359788;359789;359790;359791;359792;359793;359794;359795;359796;359797;359798;359799 284403;284404;284405;284406;284407;284408;284409;284410;284411;284412;284413;284414;284415;284416;284417;284418;284419;284420 284403 14 QVNYEVDRR Unmodified 1177.584 0.5839842 2231 Q13085 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 19.427 19.695 3 0.011735 18977 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 47.187 38.288 95932000 0 0 0 4377800 0 11904000 0 7704100 5704600 13080000 9321300 13247000 7776500 7948800 14867000 43139 2231 38617 359800;359801;359802;359803;359804;359805;359806;359807;359808;359809 284421;284422;284423;284424;284425;284426 284424 5 QVNYNDGSQEDR Unmodified 1423.5964 0.59639938 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 13.963 14.145 2 0.0064992 13430 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 51.268 48.012 17852000 0 0 0 1912800 1102600 1696400 0 0 0 1871000 2770300 1587400 1606500 2086300 3218400 43140 2451 38618 359810;359811;359812;359813;359814;359815;359816;359817;359818 284427;284428;284429 284429 3 QVPAPLLPSCDATAR Unmodified 1594.8137 0.81372614 2301 Q13495 MAMLD1 Mastermind-like domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 68.401 68.405 2 0.0029134 78620 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 47.288 20.19 59895000 0 0 0 2891500 3865100 8157100 5102000 4328700 3526300 6909500 9535000 0 6713400 8866500 0 43141 2301 38619 359819;359820;359821;359822;359823;359824;359825;359826;359827;359828 284430;284431;284432 284431 3 QVPGGGGGGGSGGGGGSGGGGSGGGR Unmodified 1842.7953 0.79532697 4895 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 2 2 1 2 1 2 2 2 1 1 1 1 7.2139 7.3211 2;3 4.9757E-109 5452 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 160.97 156.96 180530000 0 0 0 12576000 9316100 11627000 12321000 9439200 14021000 20653000 38090000 15476000 13777000 10742000 12495000 43142 4895 38620 359829;359830;359831;359832;359833;359834;359835;359836;359837;359838;359839;359840;359841;359842;359843;359844;359845;359846 284433;284434;284435;284436;284437;284438;284439;284440;284441;284442;284443;284444;284445 284439 13 QVPGGGGGGGSGGGGGSGGGGSGGGRGAGGEENK Unmodified 2585.1199 0.11990859 4895 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.4299 7.5577 3 2.0737E-159 5448 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 139.54 126.48 226220000 0 0 0 5599600 6045800 9859200 11745000 16571000 13871000 16369000 63828000 25350000 21093000 14565000 21326000 43143 4895 38621 359847;359848;359849;359850;359851;359852;359853;359854;359855;359856;359857;359858 284446;284447;284448;284449;284450;284451;284452;284453;284454;284455;284456 284450 11 QVPLNPDLNQTK Unmodified 1365.7252 0.72522871 2477 Q15022 SUZ12 Polycomb protein SUZ12 yes yes 0 0 0 By MS/MS 2 0 1 1 55.089 49.283 2 0.012982 63681 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.598 28.663 21438000 0 21438000 0 0 0 0 0 0 0 0 0 0 0 0 0 43144 2477 38622 359859 284457 284457 1 QVPNESFFNFFNPLK Unmodified 1826.8992 0.89917033 4057 Q99733 NAP1L4 Nucleosome assembly protein 1-like 4 yes yes 0 0 0 By MS/MS 2 0 1 1 100.22 92.086 2 0.00056925 118638 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.096 61.154 11330000 11330000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43145 4057 38623 359860 284458 284458 1 QVPPQRCPVEIPPIR Unmodified 1784.972 0.97195812 2781 Q5T749 KPRP Keratinocyte proline-rich protein yes yes 0 0 1 By MS/MS 10 0 1 1 67.007 66.329 3 0.038552 76950 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 34.432 26.723 4766900 0 0 0 4766900 0 0 0 0 0 0 0 0 0 0 0 43146 2781 38624 359861 284459 284459 0 QVPVDVVEMK Unmodified 1142.6005 0.60054547 1776 P55884 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 62.558 62.811 2 0.0099222 71809 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 56.916 28.698 70697000 0 0 0 0 0 0 7224100 4603100 4660100 0 5619100 0 6070500 13981000 28539000 43147 1776 38625 359862;359863;359864;359865;359866;359867;359868 284460;284461;284462;284463;284464;284465;284466 284460 7 QVPVDVVEMK Oxidation (M) 1158.5955 0.59546009 1776 P55884 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 6.21 3.8 4 3 7 2 4 1 1 1 1 1 1 1 1 49.445 46.688 2 0.0051908 59574 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.213 58.654 242260000 7680000 175260000 1484600 7620000 4391400 0 8257700 0 5633500 0 11019000 0 10297000 10616000 0 43148 1776 38625 359869;359870;359871;359872;359873;359874;359875;359876;359877;359878;359879;359880;359881;359882 284467;284468;284469;284470;284471;284472;284473;284474;284475 284467 2901 9 QVPVESDLQEIIK Unmodified 1496.8086 0.80862399 2250;2227 Q13188;Q13043 STK3;STK4 Serine/threonine-protein kinase 3;Serine/threonine-protein kinase 3 36kDa subunit;Serine/threonine-protein kinase 3 20kDa subunit;Serine/threonine-protein kinase 4;Serine/threonine-protein kinase 4 37kDa subunit;Serine/threonine-protein kinase 4 18kDa subunit no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 83.486 82.965 2 0.0019986 95695 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.691 38.698 308990000 0 201960000 0 2311100 3877300 10143000 4831700 6138000 6970600 11353000 12977000 8860300 10182000 10670000 18715000 43149 2250;2227 38626 359883;359884;359885;359886;359887;359888;359889;359890;359891;359892;359893;359894;359895;359896 284476;284477;284478;284479;284480;284481;284482;284483;284484;284485;284486;284487;284488 284480 13 QVQAEVPGSPIFVMR Unmodified 1656.8658 0.86576171 2231 Q13085 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 82.693 82.798 2 0.0031637 95903 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 60.255 36.404 3875400 0 0 0 0 0 2276500 0 1599000 0 0 0 0 0 0 0 43150 2231 38627 359897;359898 284489;284490;284491 284490 3 QVQAEVPGSPIFVMR Oxidation (M) 1672.8607 0.86067633 2231 Q13085 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes yes 0 1 0 By MS/MS 10 0 1 1 75.545 75.7 2 0.037178 87215 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 40.616 21.373 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43151 2231 38627 359899 284492 284492 1 QVQEFLK Unmodified 890.48617 0.48616764 982 P13667 PDIA4 Protein disulfide-isomerase A4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 42.249 41.19 2 0.028147 44764 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 76.847 43.331 1133400000 23158000 763170000 0 12643000 12400000 12466000 20028000 28226000 13203000 25530000 56025000 33554000 33907000 29767000 69282000 43152 982 38628 359900;359901;359902;359903;359904;359905;359906;359907;359908;359909;359910;359911;359912;359913;359914 284493;284494;284495;284496;284497;284498 284497 6 QVQELIINK Unmodified 1083.6288 0.62880913 3663 Q92797 SYMPK Symplekin yes yes 0 0 0 By MS/MS 2 0 1 1 55.434 49.619 2 0.0014559 64124 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 132.08 69.426 50732000 0 50732000 0 0 0 0 0 0 0 0 0 0 0 0 0 43153 3663 38629 359915 284499 284499 1 QVQELQAGPLNIDVAPGAPQEK Unmodified 2301.1965 0.19647456 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 0 By MS/MS 3 0 1 1 90.195 86.981 3 0.031144 104141 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 20.814 12.424 12231000 0 12231000 0 0 0 0 0 0 0 0 0 0 0 0 0 43154 2446 38630 359916 284500 284500 1 QVQFHQGFGDLAVLK Unmodified 1685.8889 0.88893999 2215 Q12965 MYO1E Unconventional myosin-Ie yes yes 0 0 0 By matching By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 78.941 79.081 3 0.03255 90673 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 28.089 21.509 26921000 0 0 0 0 0 3157000 2396200 4827200 0 4268900 0 0 0 0 12272000 43155 2215 38631 359917;359918;359919;359920;359921 284501 284501 1 QVQGSEISSIDEFCRK Unmodified 1881.8891 0.88907593 4952 Q9UK41 VPS28 Vacuolar protein sorting-associated protein 28 homolog yes yes 0 0 1 By matching By MS/MS By MS/MS 10 0 3 1 1 1 60.416 60.695 3 0.029077 69090 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 23.635 13.15 11978000 0 0 0 0 0 0 0 0 0 2984300 0 5002400 3991100 0 0 43156 4952 38632 359922;359923;359924 284502 284502 1 QVQHILASASPSGR Unmodified 1449.7688 0.76882486 614 O94979 SEC31A Protein transport protein Sec31A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 1 2 2 1 2 2 2 34.334 34.495 2;3 3.7827E-12 36690 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 103.91 67.216 236790000 0 0 0 9961500 7526200 20305000 17124000 15331000 1699200 22833000 29346000 24158000 25242000 20980000 42285000 43157 614 38633 359925;359926;359927;359928;359929;359930;359931;359932;359933;359934;359935;359936;359937;359938;359939;359940;359941;359942;359943;359944;359945;359946 284503;284504;284505;284506;284507;284508;284509;284510;284511;284512 284506 8 QVQIDGLVVLK Unmodified 1210.7285 0.72852317 279 O15372 EIF3H Eukaryotic translation initiation factor 3 subunit H yes yes 0 0 0 By MS/MS 2 0 1 1 88.924 80.794 2 0.0042853 105061 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.46 60.682 9128300 9128300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43158 279 38634 359947 284513 284513 1 QVQLQQEAEPLK Unmodified 1409.7514 0.75144346 5007 Q9ULV3 CIZ1 Cip1-interacting zinc finger protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 48.87 48.845 2 0.0028156 54019 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.815 59.379 30763000 0 0 0 3621800 5188100 0 7143200 0 0 0 0 0 0 4448700 10361000 43159 5007 38635 359948;359949;359950;359951;359952;359953 284514;284515;284516;284517 284515 4 QVQMAATHIAR Unmodified 1224.6397 0.63972494 2034 Q00403 GTF2B Transcription initiation factor IIB yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 29.977 30.155 3 0.0012804 33190 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 69.672 57.458 141590000 0 0 0 8332200 8103500 12517000 11853000 10165000 9126500 15740000 14967000 17625000 0 14952000 18210000 43160 2034 38636 359954;359955;359956;359957;359958;359959;359960;359961;359962;359963;359964 284518;284519 284519 2 QVQNLVNK Unmodified 941.52943 0.52942943 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 21.395 21.525 2 0.0048806 22111 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 108.98 48.011 305670000 0 0 0 51107000 19034000 15782000 17749000 107980000 12008000 15869000 0 33053000 24510000 8583100 0 43161 1029 38637 359965;359966;359967;359968;359969;359970;359971;359972;359973;359974 284520;284521;284522;284523;284524;284525;284526;284527;284528;284529;284530 284527 11 QVQPEGPYR Unmodified 1072.5302 0.53015772 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.468 24.672 2 2.6369E-09 26425 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 163.77 127.89 354400000 0 0 0 17634000 16069000 43842000 16014000 21339000 8080400 37178000 35388000 38050000 22359000 21698000 76745000 43162 1565 38638 359975;359976;359977;359978;359979;359980;359981;359982;359983;359984;359985;359986 284531;284532;284533;284534;284535;284536;284537;284538;284539;284540;284541;284542;284543 284531 13 QVQPLVLLR Unmodified 1064.6706 0.67061436 473 O75182 SIN3B Paired amphipathic helix protein Sin3b yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 78.371 78.477 2 0.0087271 90622 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 68.787 43.05 43642000 0 0 0 0 2974800 4001000 2776300 3043200 2275800 4519400 3990900 5806900 3427100 3577500 7249200 43163 473 38639 359987;359988;359989;359990;359991;359992;359993;359994;359995;359996;359997 284544;284545;284546;284547;284548;284549;284550 284549 7 QVQPQLQQEAEPQK Unmodified 1649.8373 0.83729835 5007 Q9ULV3 CIZ1 Cip1-interacting zinc finger protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.724 35.906 2 9.5516E-14 38500 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 113.63 86.74 70519000 0 0 0 5818700 4315700 4154100 5665000 5056800 4465500 6785000 6872300 6740700 5337400 6345100 8962900 43164 5007 38640 359998;359999;360000;360001;360002;360003;360004;360005;360006;360007;360008;360009 284551;284552;284553;284554;284555;284556;284557;284558;284559;284560;284561;284562 284554 12 QVQPQVQPQAHSQGPR Unmodified 1783.9078 0.90777795 5007 Q9ULV3 CIZ1 Cip1-interacting zinc finger protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 23.256 23.508 3 0.0002286 23877 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.374 54.104 64089000 0 0 0 5463300 7291400 0 0 0 0 0 0 9850600 10628000 17433000 13423000 43165 5007 38641 360010;360011;360012;360013;360014;360015 284563;284564;284565;284566;284567 284563 4 QVQPQVQPQAHSQPPR Unmodified 1823.9391 0.93907808 5007 Q9ULV3 CIZ1 Cip1-interacting zinc finger protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 26.99 27.446 3 0.00040595 29444 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 60.509 56.029 30814000 0 0 0 0 0 0 0 0 0 0 9437900 0 6482500 6962500 7931500 43166 5007 38642 360016;360017;360018;360019;360020 284568;284569;284570;284571;284572;284573 284572 6 QVQQPSVAQLR Unmodified 1252.6888 0.68878362 2470 Q15007 WTAP Pre-mRNA-splicing regulator WTAP yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 2 1 1 1 1 1 1 1 44.331 44.681 2 1.1772E-05 50060 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 122.13 81.106 29087000 0 0 0 0 0 8314700 0 0 0 0 0 0 0 6327200 14445000 43167 2470 38643 360021;360022;360023;360024;360025;360026;360027;360028;360029;360030;360031 284574;284575;284576;284577;284578;284579;284580;284581;284582;284583 284576 10 QVQSLTCEVDALK Unmodified 1489.7446 0.74464352 870 P08670 VIM Vimentin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.71 1.48 1 27 1 2 2 2 2 2 2 1 3 2 4 3 2 71.282 71.078 2;3 2.4512E-13 78620 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 139.15 114.38 5956200000 0 315800000 0 317530000 519070000 520060000 517980000 441980000 416080000 722570000 761180000 0 12950000 662790000 748200000 43168 870 38644 360032;360033;360034;360035;360036;360037;360038;360039;360040;360041;360042;360043;360044;360045;360046;360047;360048;360049;360050;360051;360052;360053;360054;360055;360056;360057;360058;360059 284584;284585;284586;284587;284588;284589;284590;284591;284592;284593;284594;284595;284596;284597;284598;284599;284600;284601;284602;284603;284604;284605;284606;284607;284608;284609;284610;284611;284612;284613 284593 28 QVQSQAHGLQMR Unmodified 1381.6885 0.68846605 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 23.03 23.178 3 0.0092667 23823 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 43.502 33.99 89677000 0 0 0 0 6159700 11002000 7355000 7503700 0 18931000 17480000 0 11614000 9632300 0 43169 2431 38645 360060;360061;360062;360063;360064;360065;360066;360067 284614;284615;284616 284615 0 QVQTLQDELQK Unmodified 1328.6936 0.69359423 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching 8.4 3.2 1 4 1 1 1 1 1 47.617 46.709 2 0.00046967 59292 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.28 85.9 40795000 0 27211000 0 0 0 2925900 0 0 0 4161400 0 2841100 0 3656300 0 43170 5049 38646 360068;360069;360070;360071;360072 284617;284618;284619 284619 3 QVQVALETAQR Unmodified 1241.6728 0.67279921 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 43.062 43.179 2 0.00028163 48971 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 93.111 62.037 69871000 0 0 0 10764000 5720800 8595100 6768000 6123100 0 0 8161200 11703000 7730500 4305600 0 43171 2501 38647 360073;360074;360075;360076;360077;360078;360079;360080;360081;360082 284620;284621;284622;284623;284624;284625;284626;284627;284628;284629;284630;284631 284630 12 QVREMEAELEDERK Oxidation (M) 1776.8312 0.8312267 1356 P35579 MYH9 Myosin-9 yes yes 0 1 2 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 22.287 22.26 3 0.00070804 23087 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 75.012 69.541 52655000 0 0 0 5888700 6063500 10254000 13509000 4965500 11974000 0 0 0 0 0 0 43172 1356 38648 360083;360084;360085;360086;360087;360088 284632 284632 2075 1 QVRVLTDAVDDITSIDDFLAVSENHILEDVNK Unmodified 3582.8053 0.80533611 1340 P35221 CTNNA1 Catenin alpha-1 yes yes 0 0 1 By MS/MS 2 0 1 1 102.44 94.314 4 1.1403E-50 121324 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 103.07 93.271 20619000 20619000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43173 1340 38649 360089 284633 284633 1 QVSDLISVLR Unmodified 1128.6503 0.65027285 1062 P17844 DDX5 Probable ATP-dependent RNA helicase DDX5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.137 82.199 2 0.0019652 94686 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 99.013 38.103 492170000 0 0 0 17615000 20183000 38982000 30352000 30549000 26449000 62621000 54842000 52482000 29894000 39443000 88763000 43174 1062 38650 360090;360091;360092;360093;360094;360095;360096;360097;360098;360099;360100;360101 284634;284635;284636;284637;284638;284639;284640;284641;284642;284643;284644;284645;284646 284638 10 QVSGGEDEIQQLQK Unmodified 1557.7635 0.76346471 2891 Q6KC79 NIPBL Nipped-B-like protein yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 45.596 45.706 2 0.012306 51570 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 52.79 27.404 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43175 2891 38651 360102;360103 284647;284648 284647 2 QVSGPERTIPITREEK Unmodified 1838.985 0.98502522 756 P02511 CRYAB Alpha-crystallin B chain yes yes 0 0 2 By MS/MS 2 0 1 1 46.864 39.386 4 0.011955 54722 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 36.928 25.012 21739000 21739000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43176 756 38652 360104 284649 284649 1 QVSGQLLEER Unmodified 1157.6041 0.60405094 5278 Q9Y6D9 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 42.318 42.588 2 0.037842 47496 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 40.725 13.096 58687000 0 0 0 0 0 20084000 5554100 0 9333700 0 0 10294000 13422000 0 0 43177 5278 38653 360105;360106;360107;360108;360109 284650 284650 1 QVSGQLLEERK Unmodified 1285.699 0.69901396 5278 Q9Y6D9 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.501 31.687 3 0.0031943 35056 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 59.496 46.218 254710000 0 0 0 10256000 15863000 24752000 20407000 18428000 16232000 25199000 25003000 23264000 18732000 19621000 36958000 43178 5278 38654 360110;360111;360112;360113;360114;360115;360116;360117;360118;360119;360120;360121 284651;284652;284653;284654;284655;284656;284657 284657 2 QVSNMVAK Oxidation (M) 891.4484 0.44840192 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 1 0 By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 6.6758 6.8533 2 0.048323 3835 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 41.892 22.256 64709000 0 0 0 0 4362300 0 0 3842300 4865900 8048600 7015000 8409100 8510200 9713400 9942400 43179 1986 38655 360122;360123;360124;360125;360126;360127;360128;360129;360130 284658 284658 1 QVSPEALEGK Unmodified 1056.5451 0.54513908 1238 P28715 ERCC5 DNA repair protein complementing XP-G cells yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 36.231 36.341 2 0.0026012 39610 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 81.972 41.248 19407000 0 0 0 0 3398100 0 0 0 1220900 0 9464000 0 0 5323600 0 43180 1238 38656 360131;360132;360133;360134;360135 284659;284660;284661;284662 284660 4 QVSPTEMVAK Unmodified 1088.5536 0.55359527 2777 Q5T5X7 BEND3 BEN domain-containing protein 3 yes yes 0 0 0 By MS/MS 2 0 1 1 43.169 38.021 2 0.026114 49403 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.717 30.641 15710000 0 15710000 0 0 0 0 0 0 0 0 0 0 0 0 0 43181 2777 38657 360136 284663 284663 1 QVSSHIQVLAR Unmodified 1236.6939 0.693869 1235 P28347;Q15561;Q99594;Q15562 TEAD1;TEAD4;TEAD3;TEAD2 Transcriptional enhancer factor TEF-1;Transcriptional enhancer factor TEF-3;Transcriptional enhancer factor TEF-5;Transcriptional enhancer factor TEF-4 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 27 2 3 2 3 2 2 3 3 2 2 1 2 39.568 39.724 2;3 0.00077442 43106 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 71.066 47.769 331880000 0 0 0 19678000 21609000 30707000 29508000 21400000 17735000 37946000 44906000 40691000 37944000 19390000 10369000 43182 1235 38658 360137;360138;360139;360140;360141;360142;360143;360144;360145;360146;360147;360148;360149;360150;360151;360152;360153;360154;360155;360156;360157;360158;360159;360160;360161;360162;360163 284664;284665;284666;284667;284668;284669;284670;284671;284672 284670 6 QVSSIPIISGGTK Unmodified 1285.7242 0.72416608 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.158 66.243 2 0.00077332 76015 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 82.954 44.678 298340000 0 0 0 13915000 17056000 21362000 24051000 21372000 19304000 28495000 32491000 43211000 28942000 23902000 24237000 43183 3023 38659 360164;360165;360166;360167;360168;360169;360170;360171;360172;360173;360174;360175 284673;284674;284675;284676;284677;284678;284679;284680;284681;284682;284683;284684 284681 8 QVSTEEAQAWCR Unmodified 1463.6463 0.64632646 1648 P51151 RAB9A Ras-related protein Rab-9A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 42.897 43.102 2 1.2121E-14 47249 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 155.42 148.29 99156000 0 0 0 0 7971600 0 8033800 9921300 7371300 10923000 15090000 0 12200000 7987900 19657000 43184 1648 38660 360176;360177;360178;360179;360180;360181;360182;360183;360184;360185;360186 284685;284686;284687;284688;284689;284690;284691;284692;284693;284694;284695;284696;284697 284688 13 QVSVALSSSSIR Unmodified 1232.6725 0.67246486 3225 Q8IVD9 NUDCD3 NudC domain-containing protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 52.431 52.658 2 0.031852 59767 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 36.684 15.712 38921000 0 0 0 0 1427100 3741000 2597600 0 0 4992700 4923700 8634100 2796800 4086700 5721100 43185 3225 38661 360187;360188;360189;360190;360191;360192;360193;360194;360195 284698;284699;284700 284698 3 QVTAPELNSIIR Unmodified 1339.746 0.74596415 2148 Q08117 AES Amino-terminal enhancer of split yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.7 76.758 2 0.0010554 88854 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 71.03 43.259 270260000 0 0 0 12288000 12769000 15301000 19346000 20903000 14172000 32542000 29467000 29513000 24134000 20030000 39790000 43186 2148 38662 360196;360197;360198;360199;360200;360201;360202;360203;360204;360205;360206;360207 284701;284702;284703;284704;284705;284706;284707;284708;284709 284708 9 QVTDLEAEREQK Unmodified 1444.7158 0.71578623 2479 Q15025 TNIP1 TNFAIP3-interacting protein 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS 9.3 2.1 1 9 1 1 1 1 1 1 1 1 1 1 23.762 23.439 3 0.024495 24092 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 35.677 21.931 27534000 0 3945700 0 1712800 2611200 1555700 1652500 2169300 0 4256900 2926500 0 3946300 2757000 0 43187 2479 38663 360208;360209;360210;360211;360212;360213;360214;360215;360216;360217 284710;284711;284712 284711 2 QVTEEVRK Unmodified 987.53491 0.53490874 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 7.7928 7.0963 2 0.022396 8272 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 117.39 12.348 247370000 10510000 98232000 19545000 4847000 4264300 6274500 6154200 5650200 6287300 9783300 23229000 15817000 10011000 8613700 18148000 43188 965 38664 360218;360219;360220;360221;360222;360223;360224;360225;360226;360227;360228;360229;360230;360231;360232;360233 284713;284714;284715;284716;284717;284718 284716 5 QVTNAVLK Unmodified 871.51272 0.51271674 2328 Q13616 CUL1 Cullin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.53 2.94 1 2 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 27.217 26.457 2 0.011855 26932 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.972 26.914 395600000 301410 282980000 0 5832600 4931200 16153000 6605600 3799000 4404400 11612000 14145000 12256000 8257500 7803800 16517000 43189 2328 38665 360234;360235;360236;360237;360238;360239;360240;360241;360242;360243;360244;360245;360246;360247;360248 284719;284720;284721;284722;284723 284722 5 QVTQEEGQQLAR Unmodified 1385.6899 0.68990583 1870 P62070 RRAS2 Ras-related protein R-Ras2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 25.008 25.368 2 3.1925E-06 26549 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 111.61 80.533 26755000 0 0 0 0 0 0 0 3111000 2181900 3737400 0 4794500 3579100 0 9351400 43190 1870 38666 360249;360250;360251;360252;360253;360254;360255 284724;284725;284726;284727;284728;284729 284729 6 QVTQLAIDTEER Unmodified 1401.71 0.70997257 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.518 51.734 2 5.5537E-20 58493 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 189.58 152.24 1115700000 0 0 0 88731000 0 103820000 96560000 109210000 64889000 0 133210000 152740000 102640000 103240000 160690000 43191 2102 38667 360256;360257;360258;360259;360260;360261;360262;360263;360264;360265;360266;360267 284730;284731;284732;284733;284734;284735;284736;284737;284738;284739;284740;284741 284730 12 QVTQLAIDTEERLK Unmodified 1642.889 0.88899957 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.25 5 19 1 2 2 1 1 2 1 2 2 1 1 2 2 2 2 65.836 64.841 2;3 1.537E-44 85143 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 139.86 120.61 825850000 15363000 135110000 37472000 10523000 4255500 74923000 24030000 40711000 54497000 73590000 48546000 87354000 53267000 52936000 113270000 43192 2102 38668 360268;360269;360270;360271;360272;360273;360274;360275;360276;360277;360278;360279;360280;360281;360282;360283;360284;360285;360286;360287;360288;360289;360290;360291 284742;284743;284744;284745;284746;284747;284748;284749;284750;284751;284752;284753;284754;284755;284756;284757;284758;284759;284760;284761;284762;284763;284764;284765 284747 19 QVTRDYDEEEQGYDSEK Unmodified 2089.8712 0.87123684 2115 Q05519 SRSF11 Serine/arginine-rich splicing factor 11 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 27.957 28.093 3 8.6394E-14 29485 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.601 70.688 30105000 0 0 0 0 3025500 3561100 3039500 0 4049600 4322200 0 0 0 5648200 6459000 43193 2115 38669 360292;360293;360294;360295;360296;360297;360298 284766;284767;284768;284769;284770;284771 284768 6 QVTSNSLSGTQEDGLDDPRLEK Unmodified 2388.1405 0.14047583 1284 P30533 LRPAP1 Alpha-2-macroglobulin receptor-associated protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 54.682 54.905 3 6.7711E-17 61588 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.166 76.972 70802000 0 0 0 0 3707300 0 3419500 4828000 0 8773000 9000200 13133000 5514500 6199500 16228000 43194 1284 38670 360299;360300;360301;360302;360303;360304;360305;360306;360307 284772;284773;284774;284775;284776;284777;284778;284779;284780;284781 284776 10 QVTTAENLK Unmodified 1002.5346 0.53457439 379 O43913 ORC5 Origin recognition complex subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 19.598 19.854 2 0.0034761 20416 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 103.82 61.488 732710000 0 0 0 0 28627000 0 223370000 290220000 0 37471000 45438000 61586000 0 0 46002000 43195 379 38671 360308;360309;360310;360311;360312;360313;360314 284782 284782 1 QVTVAPASGLPHK Unmodified 1303.7248 0.72483478 731 P00519 ABL1 Tyrosine-protein kinase ABL1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.176 40.355 3 0.0072596 44767 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 37.013 22.196 98194000 0 0 0 7136500 6561100 10993000 8035200 7253400 6470700 8354400 9444100 14806000 5962200 6440000 6737800 43196 731 38672 360315;360316;360317;360318;360319;360320;360321;360322;360323;360324;360325;360326 284783;284784;284785;284786;284787;284788;284789 284784 7 QVTVQPGSR Unmodified 970.51959 0.51959303 3969 Q96RL1 UIMC1 BRCA1-A complex subunit RAP80 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 15.305 15.5 2 0.021912 15240 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 51.864 32.228 37504000 0 0 0 2080800 0 1541100 2945600 3053200 1562700 3000000 7452100 6083900 0 0 9784700 43197 3969 38673 360327;360328;360329;360330;360331;360332;360333;360334;360335;360336 284790;284791;284792;284793;284794 284790 5 QVVDLIRAGEK Unmodified 1226.6983 0.69828568 3916 Q96L92 SNX27 Sorting nexin-27 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 59.588 53.534 3 0.020749 72791 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.374 38.752 76884000 70665000 0 6218400 0 0 0 0 0 0 0 0 0 0 0 0 43198 3916 38674 360337;360338 284795 284795 0 QVVEEPSPQLPADK Unmodified 1535.7831 0.78313752 1688 P52564 MAP2K6 Dual specificity mitogen-activated protein kinase kinase 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54.95 54.504 2 2.0694E-26 57491 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 171.67 146.01 453920000 0 115630000 3069600 18477000 16828000 32401000 29293000 18835000 21340000 42858000 34974000 32025000 21635000 31030000 35528000 43199 1688 38675 360339;360340;360341;360342;360343;360344;360345;360346;360347;360348;360349;360350;360351;360352 284796;284797;284798;284799;284800;284801;284802;284803;284804;284805;284806;284807;284808 284800 13 QVVEEPSPQLPADR Unmodified 1563.7893 0.78928553 1505 P46734 MAP2K3 Dual specificity mitogen-activated protein kinase kinase 3 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 53.331 53.987 2 0.02074 60264 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.879 31.434 11891000 0 0 0 0 0 0 0 0 0 0 0 4968600 0 0 6922000 43200 1505 38676 360353;360354 284809;284810 284809 2 QVVENQQLFSAFK Unmodified 1536.7936 0.79364262 5191 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 78.491 78.638 2 0.014838 91267 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 49.5 34.35 11715000 0 0 0 0 0 0 0 2526300 0 0 0 4672500 4516100 0 0 43201 5191 38677 360355;360356;360357 284811 284811 1 QVVESAYEVIK Unmodified 1263.6711 0.67106787 719 P00338 LDHA L-lactate dehydrogenase A chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.45 3.89 8 2 12 2 7 1 1 1 1 1 1 1 1 1 1 1 1 1 63.077 61.276 2 0.00028364 74067 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 123.88 103.26 16610000000 360770000 14843000000 179440000 27161000 15146000 16124000 15432000 22248000 9705900 27591000 211050000 115880000 17091000 108100000 640320000 43202 719 38678 360358;360359;360360;360361;360362;360363;360364;360365;360366;360367;360368;360369;360370;360371;360372;360373;360374;360375;360376;360377;360378;360379 284812;284813;284814;284815;284816;284817;284818;284819;284820;284821;284822;284823;284824;284825;284826;284827;284828;284829;284830;284831;284832;284833;284834 284822 22 QVVILSQDSFYR Unmodified 1453.7565 0.75652884 4277 Q9BZX2 UCK2 Uridine-cytidine kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.703 76.761 2 7.833E-20 88675 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 185.14 148.8 661990000 0 0 0 23580000 29932000 50399000 47842000 50181000 51611000 82766000 70467000 72342000 58208000 39779000 84882000 43203 4277 38679 360380;360381;360382;360383;360384;360385;360386;360387;360388;360389;360390;360391 284835;284836;284837;284838;284839;284840;284841;284842;284843;284844;284845;284846 284836 12 QVVNFGPGPAK Unmodified 1112.5978 0.59784335 5261 Q9Y617 PSAT1 Phosphoserine aminotransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.17 3.85 2 1 3 1 2 1 1 1 49.863 47.02 2 0.00034842 52768 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 88.37 56.064 107490000 10975000 19617000 0 0 0 0 0 0 0 0 0 12019000 0 13926000 50949000 43204 5261 38680 360392;360393;360394;360395;360396;360397 284847;284848;284849;284850;284851;284852;284853;284854 284854 8 QVVNIPSFIVR Unmodified 1270.7398 0.73975656 1511 P46781 RPS9 40S ribosomal protein S9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 85.684 85.751 2 6.3305E-05 99285 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 113.62 84.535 640580000 0 0 0 13475000 33391000 50217000 33450000 54442000 48416000 73566000 58397000 73831000 25968000 52824000 122600000 43205 1511 38681 360398;360399;360400;360401;360402;360403;360404;360405;360406;360407;360408;360409 284855;284856;284857;284858;284859;284860;284861;284862;284863;284864;284865;284866;284867 284858 9 QVVPFVYQTIVK Unmodified 1419.8126 0.81258715 3295 Q8IZH2 XRN1 5'-3' exoribonuclease 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 84.755 84.891 2 0.00088849 98059 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.067 61.915 38361000 0 0 0 0 0 3616700 0 5634100 2687800 5245400 3734000 3885200 2692800 2708100 8157300 43206 3295 38682 360410;360411;360412;360413;360414;360415;360416;360417;360418;360419 284868;284869;284870;284871;284872;284873;284874;284875;284876;284877;284878;284879 284870 12 QVVQATAEQMR Oxidation (M) 1275.6241 0.62413446 2779 Q5T6F2 UBAP2 Ubiquitin-associated protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.101 18.289 2 0.00020285 18114 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 94.692 74.362 73516000 0 0 0 5289800 5885800 5986000 7037400 6589900 4417700 7486900 6814700 7252100 5988400 4814100 5953200 43207 2779 38683 360420;360421;360422;360423;360424;360425;360426;360427;360428;360429;360430;360431 284880;284881;284882;284883;284884;284885;284886;284887;284888;284889;284890;284891;284892 284890 4421 11 QVVQATAEQMR Unmodified 1259.6292 0.62921983 2779 Q5T6F2 UBAP2 Ubiquitin-associated protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 32.084 32.144 2 3.1899E-11 34955 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 155.84 116.59 136170000 0 0 0 13106000 9962700 0 18677000 14923000 14586000 21811000 28868000 0 0 14237000 0 43208 2779 38683 360432;360433;360434;360435;360436;360437;360438;360439 284893;284894;284895;284896;284897;284898;284899;284900;284901 284895 8 QVVQGLLSETYLEAHR Unmodified 1841.9636 0.9635615 1334 P33993 MCM7 DNA replication licensing factor MCM7 yes yes 0 0 0 By MS/MS 10 0 1 1 78.479 78.725 3 0.0014 90515 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.593 25.731 19154000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19154000 43209 1334 38684 360440 284902 284902 1 QVVQTPNTVLSTPFR Unmodified 1685.9101 0.91006937 4010 Q99459 CDC5L Cell division cycle 5-like protein yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.133 78.193 2 4.7156E-59 90392 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 174.24 149.45 152350000 0 0 0 12070000 10425000 13264000 10225000 8935500 9278700 17963000 16177000 14884000 10168000 10130000 18828000 43210 4010 38685 360441;360442;360443;360444;360445;360446;360447;360448;360449;360450;360451;360452 284903;284904;284905;284906;284907;284908;284909;284910;284911;284912;284913;284914 284913 12 QVVQTPNTVLSTPFRTPSNGAEGLTPR Unmodified 2866.4937 0.49371921 4010 Q99459 CDC5L Cell division cycle 5-like protein yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 79.842 79.989 3 4.9904E-18 92524 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 62.237 50.157 29188000 0 0 0 0 0 2766100 0 3044800 0 4250800 4505700 6423200 0 0 8197800 43211 4010 38686 360453;360454;360455;360456;360457;360458 284915;284916;284917;284918;284919 284916 5 QVVRMTSANMDPAMMFR Unmodified 1983.9151 0.91511322 3520 Q8TEU7 RAPGEF6 Rap guanine nucleotide exchange factor 6 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 33.057 33.412 3 0.026806 36493 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 27.496 10.215 49552000 0 0 0 0 0 0 0 0 7783800 6795700 9235100 9885600 7436800 8415000 0 43212 3520 38687 360459;360460;360461;360462;360463;360464 284920 284920 1 QVVSVVQDEEVGLPFEASPESPPPASPDGVTEIR Unmodified 3560.7522 0.7522379 4003 Q96TA1 FAM129B Niban-like protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 89.808 89.921 3 0.0026562 104357 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 19.636 14.262 1842900 0 0 0 0 0 0 0 0 0 1842900 0 0 0 0 0 43213 4003 38688 360465 284921 284921 1 QVWGLNFGSK Unmodified 1134.5822 0.58219329 1629 P50552 VASP Vasodilator-stimulated phosphoprotein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.858 76.92 2 0.0044926 88785 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 72.643 46.906 75254000 0 0 0 2670400 3045600 7190500 5988000 5726600 3380200 6734000 6230900 7249500 3907400 6182500 16948000 43214 1629 38689 360466;360467;360468;360469;360470;360471;360472;360473;360474;360475;360476;360477 284922;284923;284924;284925;284926;284927 284923 6 QVYATMPINSFR Oxidation (M) 1441.7024 0.70238478 5074 Q9UQR1 ZNF148 Zinc finger protein 148 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 2 60.163 59.561 2 0.0029657 68359 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 57.348 18.326 12162000 0 0 0 6884800 5277300 0 0 0 0 0 0 0 0 0 0 43215 5074 38690 360478;360479;360480;360481;360482;360483 284928;284929;284930;284931;284932;284933 284933 6456 6 QVYDGFSFIGNTGPYEVSK Unmodified 2106.9898 0.98983583 4031 Q99598 TSNAX Translin-associated protein X yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 85.702 85.838 2 0.00030368 99246 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.034 55.473 8611000 0 0 0 0 0 0 0 0 0 3695700 0 0 0 0 4915400 43216 4031 38691 360484;360485 284934;284935;284936 284936 3 QVYEEEYGSSLEDDVVGDTSGYYQR Unmodified 2887.2308 0.23080697 873 P08758 ANXA5 Annexin A5 yes yes 0 0 0 By MS/MS 2.6 0.49 2 3 5 84.469 80.597 2;3 0 97038 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 265.77 263.29 184130000 0 184130000 0 0 0 0 0 0 0 0 0 0 0 0 0 43217 873 38692 360486;360487;360488;360489;360490 284937;284938;284939;284940;284941 284937 5 QVYGLNFGSK Unmodified 1111.5662 0.56620887 3371 Q8N8S7 ENAH Protein enabled homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.908 62.008 2 0.00012025 71127 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 132.01 58.687 317650000 0 0 0 17315000 24281000 23165000 25594000 15912000 18526000 31185000 34064000 41916000 24244000 17670000 43776000 43218 3371 38693 360491;360492;360493;360494;360495;360496;360497;360498;360499;360500;360501;360502 284942;284943;284944;284945;284946;284947;284948;284949;284950;284951;284952;284953 284950 10 QVYIPTYSK Unmodified 1097.5757 0.57571092 4140 Q9BTC8 MTA3 Metastasis-associated protein MTA3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 53.71 53.474 2 0.012702 60539 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 60.91 23.265 26378000 0 0 0 7752100 5540900 0 5679000 7406300 0 0 0 0 0 0 0 43219 4140 38694 360503;360504;360505;360506;360507 284954;284955;284956;284957;284958 284956 5 QVYIPTYTK Unmodified 1111.5914 0.59136099 583 O94776 MTA2 Metastasis-associated protein MTA2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.713 55.838 2 0.0052698 62543 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 78.334 55.315 174750000 0 0 0 11452000 9096900 19228000 13593000 13276000 11415000 18554000 13969000 15840000 12332000 13660000 22338000 43220 583 38695 360508;360509;360510;360511;360512;360513;360514;360515;360516;360517;360518;360519 284959;284960;284961;284962;284963;284964;284965;284966 284964 5 QVYMSLPQGEK Oxidation (M) 1294.6227 0.62273747 1012 P15104 GLUL Glutamine synthetase yes yes 0 1 0 By MS/MS 10 0 1 1 36.442 35.99 2 0.0055554 40277 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 51.528 39.68 8208400 0 0 0 8208400 0 0 0 0 0 0 0 0 0 0 0 43221 1012 38696 360520 284967 284967 1400 1 QWDSVVLER Unmodified 1130.572 0.57202253 4119 Q9BRX2 PELO Protein pelota homolog yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 65.933 65.848 2 0.014773 75479 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 57.96 30.706 25019000 0 0 0 2700900 1984400 5104400 2992100 5760300 0 3057200 0 0 0 3420100 0 43222 4119 38697 360521;360522;360523;360524;360525;360526;360527 284968 284968 1 QWELLLEK Unmodified 1057.5808 0.5807963 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching 10 0 4 1 1 1 1 80.515 80.651 2 0.039356 93266 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 50.703 25.781 12772000 0 0 0 0 0 3302200 0 0 0 0 2672900 0 0 1381500 5415300 43223 2344 38698 360528;360529;360530;360531 284969 284969 1 QWLADALK Unmodified 943.51272 0.51271674 4265 Q9BZG1 RAB34 Ras-related protein Rab-34 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 70.169 70.261 2 0.032702 81054 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 54.157 14.054 40856000 0 0 0 2849200 0 3081000 0 6279800 3587200 0 7366400 0 4391500 4895200 8405800 43224 4265 38699 360532;360533;360534;360535;360536;360537;360538;360539 284970;284971 284971 2 QWLMTEALVNNPK Oxidation (M) 1558.7814 0.78136338 1242 P29084 GTF2E2 Transcription initiation factor IIE subunit beta yes yes 0 1 0 By MS/MS 2 0 1 1 78.615 70.484 2 3.6595E-21 92690 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 142.43 126.8 9827300 9827300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43225 1242 38700 360540 284972 284972 1836 1 QWLQEIDR Unmodified 1086.5458 0.54580778 1911;4338 P62820;Q9H0U4;Q92928 RAB1A;RAB1B;RAB1C Ras-related protein Rab-1A;Ras-related protein Rab-1B;Putative Ras-related protein Rab-1C no no 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 62.109 62.295 2 0.02313 71271 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 60.59 21.568 16503000 0 0 0 0 0 0 0 15487000 0 0 0 0 0 1016300 0 43226 1911;4338 38701 360541;360542;360543;360544 284973;284974;284975 284973 3 QWNNCAFLESSAK Unmodified 1553.6933 0.69327665 1840 P61224;A6NIZ1 RAP1B Ras-related protein Rap-1b;Ras-related protein Rap-1b-like protein yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 64.86 65.162 2 0.00055656 74990 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 78.096 69.861 30172000 0 0 0 0 0 0 0 0 0 3087900 7766700 4794200 4031600 3217800 7273500 43227 1840 38702 360545;360546;360547;360548;360549;360550 284976;284977;284978;284979;284980;284981 284980 6 QWNVNWEIK Unmodified 1215.6037 0.60365701 3735 Q96AC1 FERMT2 Fermitin family homolog 2 yes yes 0 0 0 By MS/MS 2 0 1 1 83.52 75.389 2 0.025952 98552 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.438 48.083 29731000 29731000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43228 3735 38703 360551 284982 284982 1 QWYESHYALPLGR Unmodified 1618.7892 0.78922595 1877 P62241 RPS8 40S ribosomal protein S8 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS 10 0 4 1 1 1 1 75.15 75.302 3 0.0044173 86325 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.481 40.648 19679000 0 0 0 0 0 2768900 0 0 2430300 0 0 0 0 1876300 12603000 43229 1877 38704 360552;360553;360554;360555 284983 284983 1 QYAGLDHELAFSR Unmodified 1505.7263 0.72629134 4054 Q99720 SIGMAR1 Sigma non-opioid intracellular receptor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.221 64.312 3 0.0035611 73972 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 48.704 41.334 108990000 0 0 0 5216800 5196700 9790300 4596900 10781000 6655700 12267000 10305000 12047000 11428000 9095200 11606000 43230 4054 38705 360556;360557;360558;360559;360560;360561;360562;360563;360564;360565;360566;360567 284984;284985;284986;284987;284988;284989;284990;284991;284992 284990 9 QYAGYDYSQQGR Unmodified 1434.6164 0.61640654 3720 Q969M3 YIPF5 Protein YIPF5 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 31.839 32.248 2 2.5937E-05 34702 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 94.297 83.145 33704000 0 0 0 0 0 0 0 5681100 0 3513500 4647700 6149200 4190800 3128900 6392900 43231 3720 38706 360568;360569;360570;360571;360572;360573;360574;360575 284993;284994;284995;284996;284997;284998;284999;285000 285000 8 QYAIVFR Unmodified 895.49159 0.49158736 2042 Q00653 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 61.786 62.062 2 0.04788 69958 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.263 30.157 50963000 0 0 0 0 0 7018500 0 4547400 0 8410700 5433500 8642000 5765300 0 11146000 43232 2042 38707 360576;360577;360578;360579;360580;360581;360582 285001 285001 1 QYDAGRDGFIDLMELK Unmodified 1869.8931 0.89309867 3770 Q96C19 EFHD2 EF-hand domain-containing protein D2 yes yes 0 0 1 By MS/MS 2 0 1 1 92.92 84.79 3 0.000389 109905 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.918 49.479 10288000 10288000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43233 3770 38708 360583 285002 285002 1 QYDEALNK Unmodified 979.46108 0.4610751 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 19.389 19.958 2 0.0050481 20142 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 128.37 82.483 95610000 0 0 0 0 0 0 0 0 0 0 46135000 49475000 0 0 0 43234 1986 38709 360584;360585 285003;285004 285003 1 QYDEDGHTSEEK Unmodified 1436.5692 0.56918158 4629 Q9NSK0 KLC4 Kinesin light chain 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 6.7332 6.9149 3 0.02131 4579 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 36.32 29.417 27764000 0 0 0 2707600 0 0 0 0 0 0 6050200 4318000 4927500 2954800 6805500 43235 4629 38710 360586;360587;360588;360589;360590;360591 285005 285005 1 QYDISDPQRPR Unmodified 1373.6688 0.66877646 2256 Q13228 SELENBP1 Selenium-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 30.843 31.351 3 0.0094152 33001 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.634 29.905 48356000 0 0 0 0 0 0 0 0 0 0 0 0 0 16635000 31721000 43236 2256 38711 360592;360593 285006 285006 1 QYDSFTFTASK Unmodified 1293.5877 0.58773217 5150 Q9Y3B3 TMED7 Transmembrane emp24 domain-containing protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 2 1 1 1 1 1 60.417 60.455 2 0.012415 69556 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 64.374 40.419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43237 5150 38712 360594;360595;360596;360597;360598;360599;360600;360601;360602 285007;285008;285009;285010;285011;285012;285013;285014;285015 285015 9 QYDSVECPFCDEVSK Unmodified 1861.7499 0.74986483 1637 P50750 CDK9 Cyclin-dependent kinase 9 yes yes 0 0 0 By MS/MS 2 0 1 1 66.735 60.818 2 1.4012E-22 77805 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.72 104.53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43238 1637 38713 360603 285016 285016 1 QYDTYGEEGLK Unmodified 1301.5776 0.57756142 4855 Q9UBS4 DNAJB11 DnaJ homolog subfamily B member 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 39.076 38.427 2 0.0012328 41783 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 74.162 63.452 217580000 0 141870000 0 7154400 3919300 4119300 6312300 4668300 3057100 5509500 10967000 0 5743500 6920800 17332000 43239 4855 38714 360604;360605;360606;360607;360608;360609;360610;360611;360612;360613;360614;360615;360616 285017;285018;285019;285020;285021;285022;285023;285024;285025;285026;285027;285028;285029 285026 13 QYEAYVQALEGK Unmodified 1397.6827 0.68269519 2470 Q15007 WTAP Pre-mRNA-splicing regulator WTAP yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.477 71.549 2 0.00093286 82177 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 72.434 55.763 63562000 0 0 0 4139200 3312500 4415000 4821600 5351000 3149600 6187900 7079500 6194500 5519700 6303000 7089000 43240 2470 38715 360617;360618;360619;360620;360621;360622;360623;360624;360625;360626;360627;360628 285030;285031;285032;285033;285034;285035 285033 6 QYEGGIFK Unmodified 940.46543 0.46543219 936 P11172 UMPS Uridine 5'-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5'-phosphate decarboxylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 42.607 42.922 2 0.032623 46574 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.205 28.378 109590000 0 0 0 0 0 16367000 11041000 8529800 7948200 0 0 17232000 13307000 14438000 20727000 43241 936 38716 360629;360630;360631;360632;360633;360634;360635;360636 285036 285036 1 QYEQQTYQVIPEVIK Unmodified 1864.9571 0.95707914 5084 Q9Y262 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 2 2 2 1 1 1 2 1 2 79.266 79.35 2;3 1.4895E-27 91844 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 174.23 150.85 175280000 0 0 0 0 14030000 21589000 12448000 0 8772700 15170000 13896000 38311000 0 13805000 37264000 43242 5084 38717 360637;360638;360639;360640;360641;360642;360643;360644;360645;360646;360647;360648;360649;360650 285037;285038;285039;285040;285041;285042;285043;285044;285045;285046;285047 285046 11 QYFEQFGK Unmodified 1045.4869 0.48689592 3797 Q96DH6;O43347 MSI2;MSI1 RNA-binding protein Musashi homolog 2;RNA-binding protein Musashi homolog 1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 51.982 52.127 2 0.022985 57856 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.709 44.506 78804000 0 0 0 3469500 3575800 7487100 3874800 5135700 0 7663100 9242200 9065600 6837300 7660300 14792000 43243 3797 38718 360651;360652;360653;360654;360655;360656;360657;360658;360659;360660;360661 285048;285049;285050;285051;285052 285049 5 QYFEQYSR Unmodified 1119.4985 0.49852324 2136 Q07157 TJP1 Tight junction protein ZO-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 39.67 39.78 2 0.018652 44580 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 64.265 45.482 59415000 0 0 0 5430400 4723300 6721100 4340800 5733100 4378900 6821900 6563900 0 6806000 0 7895300 43244 2136 38719 360662;360663;360664;360665;360666;360667;360668;360669;360670;360671 285053;285054;285055;285056;285057 285057 5 QYFPNDEDQVGAAK Unmodified 1580.7107 0.71070086 983 P13674 P4HA1 Prolyl 4-hydroxylase subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 46.974 47.085 2 0.00037962 53006 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 73.781 62.188 28297000 0 0 0 0 2505400 3795700 2511200 0 0 4051500 6036100 0 5386700 4010300 0 43245 983 38720 360672;360673;360674;360675;360676;360677;360678 285058;285059;285060;285061;285062;285063;285064;285065 285059 8 QYFQTAEK Unmodified 1013.4818 0.48181054 1614 P49959 MRE11A Double-strand break repair protein MRE11A yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 2 1 25.949 26.176 2 0.013378 28038 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 72.485 53.82 164860000 0 0 0 8693200 11053000 0 12138000 12431000 10662000 16638000 17317000 23380000 16918000 14389000 21240000 43246 1614 38721 360679;360680;360681;360682;360683;360684;360685;360686;360687;360688;360689;360690 285066;285067;285068;285069;285070;285071;285072;285073 285066 8 QYGNEVFLAK Unmodified 1167.5924 0.59242362 1641 P50990 CCT8 T-complex protein 1 subunit theta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56.183 55.092 2 0.0027166 70795 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.54 82.759 2303500000 81613000 1156300000 37182000 50636000 45063000 114990000 58091000 80260000 45274000 103960000 122560000 82261000 74839000 88030000 162470000 43247 1641 38722 360691;360692;360693;360694;360695;360696;360697;360698;360699;360700;360701;360702;360703;360704;360705 285074;285075;285076;285077;285078;285079;285080;285081;285082;285083;285084;285085;285086;285087;285088;285089;285090;285091 285079 17 QYGPNVPEPILQK Unmodified 1481.7878 0.78782897 16 A3KMH1 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 68.992 69.109 2 0.032503 79755 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 43.308 24.037 24456000 0 0 0 0 2479200 0 2238200 3700100 2359400 3932400 3882900 5863900 0 0 0 43248 16 38723 360706;360707;360708;360709;360710;360711;360712 285092 285092 1 QYIEFVADR Unmodified 1139.5611 0.56112349 1301;3064 P31350;Q7LG56 RRM2;RRM2B Ribonucleoside-diphosphate reductase subunit M2;Ribonucleoside-diphosphate reductase subunit M2 B no no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 63.522 63.718 2 0.015207 72021 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 57.59 43.594 59649000 0 0 0 0 0 8326800 4081000 0 3860500 12058000 9675400 8389400 6647200 6610900 0 43249 1301;3064 38724 360713;360714;360715;360716;360717;360718;360719;360720 285093;285094 285094 2 QYIERSQASADEYSYVA Unmodified 1978.8909 0.89085007 2329 Q13617 CUL2 Cullin-2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 60.235 55.396 2 3.5597E-34 71370 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.24 116.49 29591000 0 27930000 1660700 0 0 0 0 0 0 0 0 0 0 0 0 43250 2329 38725 360721;360722 285095;285096 285095 2 QYIGPPSAAAIFK Unmodified 1361.7343 0.73433683 2557 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81.432 80.457 2 7.4639E-08 93432 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 98.254 78.983 801590000 233980000 185420000 8788100 12846000 15366000 47014000 18881000 23666000 17400000 52033000 39749000 36813000 20625000 27395000 61609000 43251 2557 38726 360723;360724;360725;360726;360727;360728;360729;360730;360731;360732;360733;360734;360735;360736;360737 285097;285098;285099;285100;285101;285102;285103;285104;285105;285106;285107;285108;285109 285108 13 QYIISEELISEGK Unmodified 1507.777 0.77698951 4970 Q9UKK9 NUDT5 ADP-sugar pyrophosphatase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.4 3.77 4 2 4 2 3 1 1 1 1 1 79.817 77.177 2 6.5654E-10 92612 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 144.17 133.41 944000000 27077000 748620000 20824000 0 0 0 0 0 0 0 29684000 34705000 0 18001000 65090000 43252 4970 38727 360738;360739;360740;360741;360742;360743;360744;360745;360746;360747 285110;285111;285112;285113;285114;285115;285116;285117;285118;285119 285114 8 QYLLCPGSSGVENTELVK Unmodified 1992.9826 0.98264196 4683 Q9NVU0 POLR3E DNA-directed RNA polymerase III subunit RPC5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.295 76.343 2 3.2666E-37 88167 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 140.31 116.94 51289000 0 0 0 3235200 3525500 4331000 3559800 3776200 0 5928400 4851100 7109700 3709900 4856800 6405400 43253 4683 38728 360748;360749;360750;360751;360752;360753;360754;360755;360756;360757;360758 285120;285121;285122;285123;285124;285125;285126;285127;285128;285129 285121 10 QYLPHVAR Unmodified 982.53485 0.53484916 268 O15260 SURF4 Surfeit locus protein 4 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching 10 0 7 1 1 1 1 1 1 1 32.787 32.944 2 0.038808 36041 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 50.898 29.216 23888000 0 0 0 0 2540300 4679300 2813000 3039200 1612900 0 3381600 5821800 0 0 0 43254 268 38729 360759;360760;360761;360762;360763;360764;360765 285130 285130 1 QYLSSLDVETDEEK Unmodified 1654.7574 0.75737628 3520 Q8TEU7 RAPGEF6 Rap guanine nucleotide exchange factor 6 yes yes 0 0 0 By matching By matching By matching By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 62.631 62.628 2 0.00015873 71642 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 97.214 63.989 19224000 0 0 0 1789100 2861000 0 2507500 0 0 4185000 4384400 0 0 0 3497500 43255 3520 38730 360766;360767;360768;360769;360770;360771 285131 285131 1 QYLSTPDSQSLR Unmodified 1393.6838 0.68375782 2860 Q68E01 INTS3 Integrator complex subunit 3 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 48.202 48.515 2 0.0020068 54581 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 64.297 45.986 34271000 0 0 0 0 0 7684100 0 5932700 0 8263900 6573900 5815900 0 0 0 43256 2860 38731 360772;360773;360774;360775;360776;360777;360778 285132;285133;285134;285135 285132 3 QYLSTTLGPK Unmodified 1106.5972 0.59717465 1092 P19532 TFE3 Transcription factor E3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 49.431 49.779 2 0.014667 56572 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 65.224 44.704 21427000 0 0 0 0 0 0 0 0 4790000 6688300 0 0 0 0 9949100 43257 1092 38732 360779;360780;360781;360782 285136;285137;285138;285139 285136 4 QYMEGFNDELEAFK Oxidation (M) 1735.74 0.73995207 2612 Q16543 CDC37 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed yes yes 0 1 0 By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 77.365 77.523 2 7.2632E-05 89104 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.182 75.615 33911000 0 0 0 0 0 3768000 0 0 999250 0 8214200 4745000 0 4465400 11720000 43258 2612 38733 360783;360784;360785;360786;360787;360788;360789 285140;285141;285142;285143 285141 4262 4 QYMFSSLK Unmodified 1002.4845 0.48445308 974 P13010 XRCC5 X-ray repair cross-complementing protein 5 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 59.534 59.842 2 0.036695 67353 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.736 40.667 32962000 0 0 0 0 0 5937500 0 0 0 1140800 7353100 4846000 3332400 0 10353000 43259 974 38734 360790;360791;360792;360793;360794;360795 285144 285144 1 QYNCSGSLGK Unmodified 1112.4921 0.49205765 2777 Q5T5X7 BEND3 BEN domain-containing protein 3 yes yes 0 0 0 By MS/MS 2 0 1 1 18.396 14.913 2 0.024228 19670 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.224 52.07 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43260 2777 38735 360796 285145 285145 1 QYNGVPLDGRPMNIQLVTSQIDAQR Oxidation (M) 2828.4239 0.42392509 3162 Q86V81 ALYREF THO complex subunit 4 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 79.644 79.819 3 2.4828E-41 91939 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 99.366 91.92 113540000 0 0 0 0 0 0 0 12758000 0 27643000 17302000 18880000 0 0 36952000 43261 3162 38736 360797;360798;360799;360800;360801 285146;285147;285148;285149;285150 285147 4782 5 QYNVDYK Unmodified 928.42905 0.42904669 4137 Q9BT78 COPS4 COP9 signalosome complex subunit 4 yes yes 0 0 0 By MS/MS 2 0 1 1 28.614 24.266 1 0.037806 31886 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 163.67 111.03 5308500 0 5308500 0 0 0 0 0 0 0 0 0 0 0 0 0 43262 4137 38737 360802 285151 285151 1 QYPANQGQEVEYFVAGTHPYPPGPGVALTADTK Unmodified 3501.6841 0.68409876 349 O43660 PLRG1 Pleiotropic regulator 1 yes yes 0 0 0 By MS/MS 3 0 1 1 88.316 85.105 3 0.0084234 101897 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 20.174 18.357 4764500 0 4764500 0 0 0 0 0 0 0 0 0 0 0 0 0 43263 349 38738 360803 285152 285152 1 QYPISLVLAPTR Unmodified 1356.7765 0.776536 170 O00571;O15523 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 84.897 84.963 2 2.3788E-05 98578 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 101.95 63.178 352150000 0 0 0 20608000 25386000 46863000 22208000 30562000 19486000 44060000 27882000 31895000 18144000 22586000 42469000 43264 170 38739 360804;360805;360806;360807;360808;360809;360810;360811;360812;360813;360814;360815 285153;285154;285155;285156;285157;285158;285159;285160;285161;285162;285163;285164;285165;285166 285163 13 QYPLVTPNEERNVMEEGK Unmodified 2132.0208 0.020818382 1358 P35606 COPB2 Coatomer subunit beta' yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 65.137 64.29 3 0.0018642 72696 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 40.844 35.175 133670000 8750700 0 15442000 6165200 3461200 7777500 0 8780300 8039700 11447000 13248000 16587000 6062000 9651800 18257000 43265 1358 38740 360816;360817;360818;360819;360820;360821;360822;360823;360824;360825;360826;360827;360828 285167;285168;285169;285170;285171;285172;285173;285174;285175;285176 285172 9 QYQIDAAIVR Unmodified 1175.6299 0.62987176 2332;2331 Q13619;Q13620 CUL4A;CUL4B Cullin-4A;Cullin-4B no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 62.634 62.754 2 0.0017421 71365 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 88.948 65.155 114130000 0 0 0 9263400 0 0 0 14584000 9845200 0 25000000 23377000 13915000 18143000 0 43266 2331;2332 38741 360829;360830;360831;360832;360833;360834;360835;360836 285177;285178;285179;285180;285181;285182;285183;285184 285183 8 QYQIPDVR Unmodified 1017.5243 0.52434406 3319 Q8N392 ARHGAP18 Rho GTPase-activating protein 18 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching 10 0 10 1 1 1 2 1 2 1 1 52.861 52.901 2 0.0091721 59806 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 83.753 54.414 51710000 0 0 0 2979400 2631500 9982300 5974400 1615600 0 14231000 0 0 0 4857600 9438800 43267 3319 38742 360837;360838;360839;360840;360841;360842;360843;360844;360845;360846 285185;285186;285187 285186 3 QYQQIISR Unmodified 1034.5509 0.55089316 3542 Q8WUF5 PPP1R13L RelA-associated inhibitor yes yes 0 0 0 By MS/MS 10 0 1 1 33.785 34.095 2 0.01039 36260 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 79.809 51.591 23280000 0 0 0 0 0 0 0 0 0 0 0 0 0 23280000 0 43268 3542 38743 360847 285188 285188 1 QYSLQNWEAR Unmodified 1293.6102 0.61019895 1547 P48637 GSS Glutathione synthetase yes yes 0 0 0 By MS/MS 10 0 1 1 60.164 60.75 2 0.0062007 68546 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.099 68.815 4025000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4025000 43269 1547 38744 360848 285189 285189 1 QYSSRDLPSHTK Unmodified 1417.695 0.69499121 4786 Q9P013 CWC15 Spliceosome-associated protein CWC15 homolog yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 20.976 17.21 3 8.7701E-05 24541 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.793 65.94 175550000 171340000 0 4211200 0 0 0 0 0 0 0 0 0 0 0 0 43270 4786 38745 360849;360850 285190 285190 0 QYTEAISVGEK Unmodified 1223.6034 0.60338224 4467 Q9H9A5 CNOT10 CCR4-NOT transcription complex subunit 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 41.588 41.732 2 0.007465 46071 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 62.303 34.816 62650000 0 0 0 6125100 4807100 0 5840500 11783000 0 8550300 0 10556000 0 5435400 9553500 43271 4467 38746 360851;360852;360853;360854;360855;360856;360857;360858;360859 285191;285192;285193;285194;285195;285196;285197 285197 6 QYTGINAISK Unmodified 1093.5768 0.57677356 1835 P61158 ACTR3 Actin-related protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.6 3.67 3 7 1 1 1 1 1 1 1 1 1 1 41.924 40.497 2 0.0033721 51317 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.642 43.907 618280000 21161000 482080000 4479300 16178000 0 10292000 0 8075100 0 11103000 15585000 16662000 0 0 32663000 43272 1835 38747 360860;360861;360862;360863;360864;360865;360866;360867;360868;360869 285198;285199;285200;285201;285202;285203;285204 285200 7 QYTMELER Oxidation (M) 1084.4859 0.48590964 271 O15294 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 0 1 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 26.94 27.131 2 0.031728 27996 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 47.574 31.942 50723000 0 0 0 3758200 5060500 5894000 0 8692200 3378400 0 0 9577300 6323100 3735500 4304100 43273 271 38748 360870;360871;360872;360873;360874;360875;360876;360877;360878 285205;285206;285207;285208 285206 4 QYTSPEEIDAQLQAEK Unmodified 1848.8741 0.87413737 2292 Q13442 PDAP1 28 kDa heat- and acid-stable phosphoprotein yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS 8.36 3.15 2 1 11 3 1 1 1 1 1 1 1 1 1 1 1 67.98 66.951 2;3 2.6332E-20 76989 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 133.88 125.36 199470000 0 106020000 0 0 2881200 4101700 2820600 2232400 3618500 4537100 17979000 15192000 2989500 12084000 25018000 43274 2292 38749 360879;360880;360881;360882;360883;360884;360885;360886;360887;360888;360889;360890;360891;360892 285209;285210;285211;285212;285213;285214;285215;285216;285217;285218 285216 10 QYVAHIMTLK Unmodified 1202.6482 0.64816436 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 54.106 54.326 3 0.045563 61777 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 34.692 27.994 72150000 0 0 0 0 4094700 5441600 0 8906200 4396500 6630300 8645200 14054000 3590100 5392400 10999000 43275 3023 38750 360893;360894;360895;360896;360897;360898;360899;360900;360901;360902 285219 285219 1 QYVAHIMTLK Oxidation (M) 1218.6431 0.64307898 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 40.116 40.221 3 0.008915 43926 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 42.743 34.518 43287000 0 0 0 6219000 7215900 3569200 7308800 0 4841100 0 0 11486000 0 0 2647000 43276 3023 38750 360903;360904;360905;360906;360907;360908;360909 285220 285220 4637 1 QYVETHWCAQSEK Unmodified 1664.7253 0.72530506 3946 Q96P70 IPO9 Importin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 37.352 37.851 3 0.0018995 40832 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.98 47.865 23784000 0 0 0 0 0 7152700 0 0 0 0 0 6731800 0 0 9899800 43277 3946 38751 360910;360911;360912 285221;285222;285223 285222 3 QYYLLEDQTVQPLPK Unmodified 1833.9513 0.95126548 3830 Q96EZ8 MCRS1 Microspherule protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 80.213 80.245 2 0.00036272 92741 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 83.397 69.969 14692000 0 0 0 0 2396700 3331100 2285900 3893600 0 0 0 0 2784800 0 0 43278 3830 38752 360913;360914;360915;360916;360917 285224;285225;285226;285227;285228 285226 5 QYYQQPTATAAAVAAAAQPQPSVAETYYQTAPK Unmodified 3483.6947 0.69466345 3913 Q96KR1 ZFR Zinc finger RNA-binding protein yes yes 0 0 0 By MS/MS 2 0 1 1 85.48 80.705 3 3.0061E-118 100361 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 137.29 135.24 19320000 0 19320000 0 0 0 0 0 0 0 0 0 0 0 0 0 43279 3913 38753 360918 285229 285229 1 QYYVLCSSRDEK Unmodified 1546.7086 0.70859237 4655;5016 Q9NUU7;Q9UMR2 DDX19A;DDX19B ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX19B no no 0 0 1 By MS/MS By matching By MS/MS 2 0 3 1 1 1 43.727 38.456 3 0.001422 52419 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.819 63.551 125240000 103440000 5925900 15874000 0 0 0 0 0 0 0 0 0 0 0 0 43280 4655;5016 38754 360919;360920;360921 285230;285231 285230 2 RAAAASAAEAGIATTGTEDSDDALLK Unmodified 2475.2089 0.20888974 1752 P55036 PSMD4 26S proteasome non-ATPase regulatory subunit 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 64.15 64.134 3 3.1886E-24 73294 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 76.161 68.144 47785000 0 0 0 0 6415700 13064000 0 0 0 11399000 16907000 0 0 0 0 43281 1752 38755 360922;360923;360924;360925 285232;285233;285234;285235 285234 3 RAAAEVNQDYGLDPK Unmodified 1645.806 0.80599822 854 P07954 FH Fumarate hydratase, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.15 3.84 7 1 5 3 3 2 1 1 1 1 1 42.137 39.051 2;3 2.0103E-22 51270 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.86 100.51 635230000 31474000 286350000 252430000 5275400 5598900 0 0 0 0 0 29655000 0 12262000 12187000 0 43282 854 38756 360926;360927;360928;360929;360930;360931;360932;360933;360934;360935;360936;360937;360938 285236;285237;285238;285239;285240;285241;285242;285243;285244;285245;285246;285247;285248;285249;285250;285251;285252;285253;285254;285255;285256 285241 21 RAAALDAGNIK Unmodified 1098.6146 0.61455605 2902 Q6NWY9 PRPF40B Pre-mRNA-processing factor 40 homolog B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 25.113 24.803 2 0.0042391 25477 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 82.645 41.216 36708000 9224100 0 0 3024900 1779200 0 2622500 2481500 0 2385000 3082700 2691000 3052300 2913400 3451000 43283 2902 38757 360939;360940;360941;360942;360943;360944;360945;360946;360947;360948;360949 285257;285258;285259 285259 3 RAAAVQADDVEVLK Unmodified 1483.7995 0.79945628 3315 Q8N201 INTS1 Integrator complex subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.16 2.46 2 17 1 1 1 1 2 1 2 1 2 2 2 2 1 48.685 48.212 2;3 0.00065813 60973 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 55.841 48.55 245060000 6738400 0 19790000 15387000 8300700 24775000 10235000 21494000 14920000 26194000 26966000 32785000 25868000 11603000 0 43284 3315 38758 360950;360951;360952;360953;360954;360955;360956;360957;360958;360959;360960;360961;360962;360963;360964;360965;360966;360967;360968 285260;285261;285262;285263;285264;285265;285266;285267;285268;285269;285270 285265 9 RAADEVLAEAK Unmodified 1171.6197 0.619701 2916 Q6P1J9 CDC73 Parafibromin yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 4 22 1 1 2 2 2 1 2 1 2 2 2 2 2 2 2 31.992 31.462 2;3 4.9404E-16 34334 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 169.58 107.03 1157700000 16653000 40391000 195170000 38557000 46273000 38985000 51997000 39853000 44392000 74795000 97521000 116030000 130340000 115980000 110770000 43285 2916 38759 360969;360970;360971;360972;360973;360974;360975;360976;360977;360978;360979;360980;360981;360982;360983;360984;360985;360986;360987;360988;360989;360990;360991;360992;360993;360994 285271;285272;285273;285274;285275;285276;285277;285278;285279;285280;285281;285282;285283;285284;285285;285286;285287;285288;285289;285290;285291;285292;285293;285294;285295;285296 285275 15 RAAEDDEDDDVDTK Unmodified 1592.6438 0.64380308 821 P06454 PTMA Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.22 3.88 51 19 73 32 27 11 4 5 7 6 7 5 4 7 7 7 6 8 9.7622 8.4006 2;3 5.6684E-179 10281 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 274.05 253.18 21124000000 6406600000 3903900000 217410000 623900000 442620000 359460000 494350000 486200000 394380000 371760000 3164300000 1132400000 895300000 531700000 1699200000 43286 821 38760 360995;360996;360997;360998;360999;361000;361001;361002;361003;361004;361005;361006;361007;361008;361009;361010;361011;361012;361013;361014;361015;361016;361017;361018;361019;361020;361021;361022;361023;361024;361025;361026;361027;361028;361029;361030;361031;361032;361033;361034;361035;361036;361037;361038;361039;361040;361041;361042;361043;361044;361045;361046;361047;361048;361049;361050;361051;361052;361053;361054;361055;361056;361057;361058;361059;361060;361061;361062;361063;361064;361065;361066;361067;361068;361069;361070;361071;361072;361073;361074;361075;361076;361077;361078;361079;361080;361081;361082;361083;361084;361085;361086;361087;361088;361089;361090;361091;361092;361093;361094;361095;361096;361097;361098;361099;361100;361101;361102;361103;361104;361105;361106;361107;361108;361109;361110;361111;361112;361113;361114;361115;361116;361117;361118;361119;361120;361121;361122;361123;361124;361125;361126;361127;361128;361129;361130;361131;361132;361133;361134;361135;361136;361137 285297;285298;285299;285300;285301;285302;285303;285304;285305;285306;285307;285308;285309;285310;285311;285312;285313;285314;285315;285316;285317;285318;285319;285320;285321;285322;285323;285324;285325;285326;285327;285328;285329;285330;285331;285332;285333;285334;285335;285336;285337;285338;285339;285340;285341;285342;285343;285344;285345;285346;285347;285348;285349;285350;285351;285352;285353;285354;285355;285356;285357;285358;285359;285360;285361;285362;285363;285364;285365;285366;285367;285368;285369;285370;285371;285372;285373;285374;285375;285376;285377;285378;285379;285380;285381;285382;285383;285384;285385;285386;285387;285388;285389;285390;285391;285392;285393;285394;285395;285396;285397;285398;285399;285400;285401;285402;285403;285404;285405;285406 285387 94 RAAEDDEDDDVDTKK Unmodified 1720.7388 0.7387661 821 P06454 PTMA Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.47 13 2 42 7 3 5 3 3 2 4 3 3 3 4 4 5 4 4 7.1423 6.4536 2;3;4 7.6542E-97 4637 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 163.8 155.01 9694800000 2544700000 158750000 209940000 420750000 437260000 39802000 668770000 699950000 107430000 314090000 1522000000 489040000 673690000 438690000 969970000 43287 821 38761 361138;361139;361140;361141;361142;361143;361144;361145;361146;361147;361148;361149;361150;361151;361152;361153;361154;361155;361156;361157;361158;361159;361160;361161;361162;361163;361164;361165;361166;361167;361168;361169;361170;361171;361172;361173;361174;361175;361176;361177;361178;361179;361180;361181;361182;361183;361184;361185;361186;361187;361188;361189;361190;361191;361192;361193;361194 285407;285408;285409;285410;285411;285412;285413;285414;285415;285416;285417;285418;285419;285420;285421;285422;285423;285424;285425;285426;285427;285428;285429;285430;285431;285432;285433;285434;285435;285436;285437;285438;285439;285440;285441 285418 32 RAAEEEDEADPK Unmodified 1358.595 0.5950024 1117 P20962 PTMS Parathymosin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.4 6 2 23 3 3 2 2 2 2 2 2 2 2 1 2 2 2 2 7.1465 6.4186 2;3 9.0737E-19 4363 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 166.69 153.66 5865300000 971640000 1365300000 96965000 226280000 172490000 101590000 189200000 259960000 177670000 269460000 347530000 278400000 357840000 250080000 800910000 43288 1117 38762 361195;361196;361197;361198;361199;361200;361201;361202;361203;361204;361205;361206;361207;361208;361209;361210;361211;361212;361213;361214;361215;361216;361217;361218;361219;361220;361221;361222;361223;361224;361225 285442;285443;285444;285445;285446;285447;285448;285449;285450;285451;285452;285453;285454;285455;285456;285457;285458;285459;285460;285461;285462;285463;285464;285465 285449 17 RAAEEEPSTSATVPMSK Unmodified 1789.8516 0.85162779 2274 Q13356 PPIL2 Peptidyl-prolyl cis-trans isomerase-like 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 33.738 33.899 3 0.0054358 37108 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 31.233 20.379 24042000 0 0 0 0 0 3044500 2372400 3182000 2248600 5301900 7892400 0 0 0 0 43289 2274 38763 361226;361227;361228;361229;361230;361231 285466;285467;285468;285469 285467 4 RAAEMELQAK Unmodified 1145.5863 0.58629239 2550 Q15583 TGIF1 Homeobox protein TGIF1 yes yes 0 0 1 By matching By matching By matching By MS/MS By matching 10 0 5 1 1 1 1 1 21.465 21.757 3 0.015034 22525 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 38.1 21.431 36517000 0 0 0 0 0 6460600 5478600 0 0 0 11312000 0 6083500 0 7181900 43290 2550 38764 361232;361233;361234;361235;361236 285470 285470 1 RAAEMMASLLK Unmodified 1219.6417 0.64169877 1328 P33176 KIF5B Kinesin-1 heavy chain yes yes 0 0 1 By MS/MS By matching By matching By MS/MS 10 0 6 2 1 1 2 65.204 65.476 2;3 0.0065683 73852 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 34 21.787 32620000 0 0 0 0 0 8251200 0 0 3111700 0 0 3937700 0 0 17320000 43291 1328 38765 361237;361238;361239;361240;361241;361242 285471;285472;285473 285472 3 RAAETVVDPEMTPYLDIANQTGR Oxidation (M) 2562.2384 0.23841573 5226 Q9Y5A7 NUB1 NEDD8 ultimate buster 1 yes yes 0 1 1 By matching By MS/MS By MS/MS By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 76.321 76.494 3 2.2797E-06 88407 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 50.498 43.782 32904000 0 0 0 0 0 0 2373200 0 0 6562700 6597500 7361900 3393400 0 6615100 43292 5226 38766 361243;361244;361245;361246;361247;361248 285474;285475;285476 285476 6628 3 RAAGAGMISK Unmodified 960.51748 0.51748454 3790 Q96D46 NMD3 60S ribosomal export protein NMD3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 12.508 12.709 2 0.029133 10930 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.162 37.152 116740000 0 0 0 16683000 0 0 13645000 9818500 11835000 20002000 8420900 11240000 7069900 5575700 12451000 43293 3790 38767 361249;361250;361251;361252;361253;361254;361255;361256;361257;361258 285477 285477 0 RAAGDGGSGPPEK Unmodified 1197.5738 0.57381344 463 O75150 RNF40 E3 ubiquitin-protein ligase BRE1B yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching 8.4 3.2 2 8 1 1 1 1 1 1 2 1 1 5.8704 5.4079 2;3 3.3309E-05 5224 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.5 78.292 66319000 0 24589000 25283000 2711000 2114300 0 3038500 2480200 0 0 2696900 1605000 0 1800200 0 43294 463 38768 361259;361260;361261;361262;361263;361264;361265;361266;361267;361268 285478;285479;285480;285481;285482 285479 4 RAAGEPGTSMPPEK Oxidation (M) 1442.6824 0.68237762 2816 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.8 3.92 2 3 1 1 1 1 1 11.594 10.43 3 0.00037828 8456 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.328 42.641 35488000 6948100 0 10896000 0 0 4938700 0 0 3860900 0 0 0 0 0 8844000 43295 2816 38769 361269;361270;361271;361272;361273 285483;285484 285483 4456 2 RAAGVVLEMIR Unmodified 1213.6965 0.69651154 5077 Q9Y230 RUVBL2 RuvB-like 2 yes yes 0 0 1 By MS/MS 10 0 1 1 68.052 68.546 3 0.0037191 77942 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.995 28.34 8775400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8775400 43296 5077 38770 361274 285485 285485 1 RAAGYAQEEQLK Unmodified 1362.6892 0.68917755 4597 Q9NRE2 TSHZ2 Teashirt homolog 2 yes yes 0 0 1 By MS/MS By matching By matching By matching 10 0 4 1 1 1 1 16.65 16.722 3 0.010694 17160 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 25.701 5.5704 6559500 0 0 0 0 1380200 0 1188300 0 0 0 0 0 2396700 1594300 0 43297 4597 38771 361275;361276;361277;361278 285486 285486 1 RAALEAAAAAAPER Unmodified 1366.7317 0.73171107 3149 Q86UK7 ZNF598 Zinc finger protein 598 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.11 35.291 3 7.125E-05 39073 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 80.706 69.493 141050000 0 0 0 9754200 5516700 8277200 10713000 8600000 7067800 14343000 13300000 13029000 19738000 14262000 16448000 43298 3149 38772 361279;361280;361281;361282;361283;361284;361285;361286;361287;361288;361289;361290 285487;285488;285489;285490;285491;285492;285493;285494;285495;285496;285497;285498;285499;285500;285501;285502;285503 285487 16 RAAPPPGQSQAQSQGQPVPTAPAR Unmodified 2396.2309 0.23090301 2969 Q6STE5 SMARCD3 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 33.234 33.681 3 9.6436E-10 36699 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 59.814 51.17 16316000 0 0 0 0 0 0 0 0 0 5220800 6444000 0 0 0 4651500 43299 2969 38773 361291;361292;361293 285504;285505;285506 285506 3 RAASLNYLNQPSAAPLQVSR Unmodified 2155.1498 0.14979914 4629 Q9NSK0 KLC4 Kinesin light chain 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 2 1 1 1 1 1 1 1 1 1 1 69.871 69.892 3 1.8376E-05 79652 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.585 48.717 64647000 0 0 0 2343600 4460100 6738800 4631200 0 4677600 5593000 7819800 8290200 4107500 5599700 10385000 43300 4629 38774 361294;361295;361296;361297;361298;361299;361300;361301;361302;361303;361304;361305;361306 285507;285508;285509;285510;285511;285512;285513;285514;285515;285516;285517;285518;285519;285520 285510 14 RAATENIPVVR Unmodified 1224.6939 0.693869 2916 Q6P1J9 CDC73 Parafibromin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.839 38.019 3 0.0017008 42089 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 59.418 47.255 162980000 0 0 0 6932600 7812900 10912000 8360400 12650000 8253400 12757000 18763000 20450000 21615000 15088000 19388000 43301 2916 38775 361307;361308;361309;361310;361311;361312;361313;361314;361315;361316;361317;361318 285521;285522;285523;285524;285525;285526;285527;285528;285529;285530 285529 10 RAATLAQELEK Unmodified 1228.6776 0.67755023 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 4 22 2 2 2 2 2 2 2 2 2 2 1 2 2 1 39.919 39.002 2;3 0.00041179 41725 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 58.781 33.713 806520000 507260000 11419000 0 17734000 13379000 32170000 27892000 18010000 17415000 35071000 35047000 14241000 32752000 26845000 17290000 43302 2431 38776 361319;361320;361321;361322;361323;361324;361325;361326;361327;361328;361329;361330;361331;361332;361333;361334;361335;361336;361337;361338;361339;361340;361341;361342;361343;361344 285531;285532;285533;285534;285535;285536;285537;285538;285539;285540;285541;285542;285543;285544;285545 285543 10 RAAVGQESPGGLEAGNAK Unmodified 1710.8649 0.86491009 2647 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.1 3.41 5 16 2 1 2 1 1 2 2 1 1 1 1 2 1 1 2 28.813 27.875 2;3 4.6288E-16 29915 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 79.676 73.259 832290000 381850000 33148000 141860000 11869000 14262000 27557000 20659000 16745000 17192000 21925000 26592000 34276000 23251000 21755000 39347000 43303 2647 38777 361345;361346;361347;361348;361349;361350;361351;361352;361353;361354;361355;361356;361357;361358;361359;361360;361361;361362;361363;361364;361365 285546;285547;285548;285549;285550;285551;285552;285553;285554;285555;285556;285557;285558;285559;285560;285561;285562;285563;285564 285546 19 RAAVLLEQER Unmodified 1183.6673 0.6673199 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 25 3 2 2 2 2 2 2 2 2 2 2 2 32.341 32.502 2;3 0.0019309 35560 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 56.404 35.534 1205900000 0 0 0 62658000 82086000 86333000 86360000 76340000 56796000 113460000 139960000 160830000 118870000 87511000 134710000 43304 2290 38778 361366;361367;361368;361369;361370;361371;361372;361373;361374;361375;361376;361377;361378;361379;361380;361381;361382;361383;361384;361385;361386;361387;361388;361389;361390 285565;285566;285567;285568;285569;285570;285571;285572;285573;285574;285575;285576;285577;285578;285579;285580;285581;285582;285583;285584;285585;285586;285587 285565 14 RAAVLLEQERQQEIAK Unmodified 1881.0432 0.043208804 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.65 1.63 1 22 1 2 1 2 2 2 2 2 2 2 1 2 2 41.682 41.526 3;4 5.3361E-20 44703 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 116.06 103.02 1722900000 88399000 0 0 42138000 31778000 102630000 97044000 96956000 136040000 136120000 107290000 356470000 106210000 95997000 325870000 43305 2290 38779 361391;361392;361393;361394;361395;361396;361397;361398;361399;361400;361401;361402;361403;361404;361405;361406;361407;361408;361409;361410;361411;361412;361413 285588;285589;285590;285591;285592;285593;285594;285595;285596;285597;285598;285599;285600;285601;285602 285591 14 RACASPSAQVEGSPVAGSDGSQPAVK Unmodified 2512.1976 0.19761355 4876 Q9UFC0 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.8 3.92 2 3 1 1 1 1 1 43.299 40.598 3 6.8545E-26 54976 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.346 93.275 27355000 13249000 0 4077300 0 0 0 0 0 0 4957900 0 0 0 5070000 0 43306 4876 38780 361414;361415;361416;361417;361418 285603;285604;285605;285606;285607;285608;285609 285605 7 RACNLTDTQK Unmodified 1205.5823 0.58226964 3061 Q7LBC6 KDM3B Lysine-specific demethylase 3B yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 4 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 8.5628 7.8929 2;3 0.0073525 5310 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 116.52 70.841 232180000 131550000 0 6279000 3289100 4387100 2668900 4242000 3681100 6120900 7409800 22366000 15556000 6125200 4886400 13622000 43307 3061 38781 361419;361420;361421;361422;361423;361424;361425;361426;361427;361428;361429;361430;361431;361432;361433;361434 285610;285611;285612;285613;285614 285611 4 RADDDRFPR Unmodified 1146.553 0.55301842 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.317 14.479 3 0.013292 13811 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 98.943 82.805 453670000 0 0 0 22117000 11232000 28966000 17979000 26154000 18635000 33183000 44473000 78639000 48013000 37625000 86654000 43308 2378 38782 361435;361436;361437;361438;361439;361440;361441;361442;361443;361444;361445;361446 285615;285616;285617;285618;285619;285620;285621;285622;285623;285624 285616 4 RADESHFLIENSTK Unmodified 1645.806 0.80599822 3621 Q92547 TOPBP1 DNA topoisomerase 2-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 38.824 39.115 3 7.5859E-05 42610 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 80.387 57.249 116020000 0 0 0 0 0 8834700 5469200 3974500 9119100 13792000 0 22956000 0 0 51873000 43309 3621 38783 361447;361448;361449;361450;361451;361452;361453 285625;285626;285627;285628;285629 285629 3 RADLNQGIGEPQSPSRR Unmodified 1879.9613 0.96127009 3770 Q96C19 EFHD2 EF-hand domain-containing protein D2 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 1 2 2 2 2 2 1 2 2 2 2 28.993 29.199 3;4 1.1033E-08 30278 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.005 63.53 708570000 0 0 0 38358000 9672400 62622000 47766000 44583000 30486000 81162000 30821000 100670000 65005000 63064000 134370000 43310 3770 38784 361454;361455;361456;361457;361458;361459;361460;361461;361462;361463;361464;361465;361466;361467;361468;361469;361470;361471;361472;361473;361474;361475 285630;285631;285632;285633;285634;285635;285636;285637;285638;285639;285640;285641;285642;285643;285644;285645;285646;285647;285648 285636 19 RADNCSPVAEEETTGSAESTLPK Unmodified 2448.1075 0.10746114 4288 Q9C0D5 TANC1 Protein TANC1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.456 47.62 3 1.4068E-54 52545 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 113.24 105.05 107080000 0 0 0 4404500 6714800 8790300 5903400 5963100 4590600 11169000 12133000 15953000 7491100 6511400 17456000 43311 4288 38785 361476;361477;361478;361479;361480;361481;361482;361483;361484;361485;361486;361487 285649;285650;285651;285652;285653;285654;285655;285656;285657;285658;285659;285660;285661 285653 13 RADSHEEGSLEK Unmodified 1356.627 0.62697123 2726 Q5H9F3 BCORL1 BCL-6 corepressor-like protein 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 6.5066 6.4109 3 0.00032615 6618 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 89.629 65.54 23772000 0 0 10620000 0 1429000 1297600 0 1172900 1594600 1499900 0 1724200 1589200 888960 1956100 43312 2726 38786 361488;361489;361490;361491;361492;361493;361494;361495;361496;361497 285662;285663 285662 2 RAEDGSVIDYELIDQDAR Unmodified 2063.976 0.97597668 840 P07355 ANXA2 Annexin A2 yes yes 0 0 1 By MS/MS 10 0 1 1 74.642 74.094 3 0.038072 85967 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 29.311 24.553 4250700 0 0 0 4250700 0 0 0 0 0 0 0 0 0 0 0 43313 840 38787 361498 285664 285664 0 RAEEADHEVLDQK Unmodified 1538.7325 0.73249893 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 16.894 16.63 3 0.0017479 17006 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 38.189 16.43 63028000 0 0 16298000 3415200 2614900 5387100 5743100 4810500 5175100 6843700 0 0 12741000 0 0 43314 2446 38788 361499;361500;361501;361502;361503;361504;361505;361506;361507 285665;285666 285666 2 RAEEFLTASQEAL Unmodified 1463.7256 0.72562264 2442 Q14738 PPP2R5D Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.36 3.15 2 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 72.088 71.372 2 1.4825E-07 89382 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.83 85.145 924110000 0 636310000 157280000 5649300 0 16907000 7527900 8064700 5930100 14207000 13339000 20512000 5472300 9710800 23200000 43315 2442 38789 361508;361509;361510;361511;361512;361513;361514;361515;361516;361517;361518;361519;361520;361521 285667;285668;285669;285670;285671;285672;285673;285674;285675;285676;285677;285678 285670 11 RAEENALQQK Unmodified 1185.6102 0.61019895 1029 P15924 DSP Desmoplakin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 8.368 8.4978 2 0.011518 5968 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 88.37 43.923 115010000 0 0 0 13512000 5647000 3554100 7753600 20602000 5177600 3884600 10366000 22464000 11878000 4008400 6159200 43316 1029 38790 361522;361523;361524;361525;361526;361527;361528;361529;361530;361531;361532;361533 285679;285680 285679 2 RAEFTVETR Unmodified 1107.5673 0.5672715 1124 P21333 FLNA Filamin-A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28.86 28.34 2 0.00083096 29114 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 132.01 56.156 968590000 575630000 0 20542000 11304000 10512000 20081000 15621000 17783000 12378000 29030000 54157000 53982000 30542000 31530000 85501000 43317 1124 38791 361534;361535;361536;361537;361538;361539;361540;361541;361542;361543;361544;361545;361546;361547 285681;285682;285683;285684;285685;285686;285687;285688;285689 285683 5 RAEFTVETRSAGQGEVLVYVEDPAGHQEEAK Unmodified 3401.6488 0.64877589 1124 P21333 FLNA Filamin-A yes yes 0 0 2 By MS/MS 3 0 1 1 78.295 74.449 4 3.7672E-13 74924 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 65.093 57.328 7591700 7591700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43318 1124 38792 361548 285690;285691;285692;285693 285692 4 RAEISNAIDQYVTGTIGEDEDLIK Unmodified 2649.3134 0.31335481 1307 P31939 ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.29 0.452 5 2 3 3 1 94.437 89.419 2;3 1.1675E-38 112324 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 115.88 109.29 303480000 225640000 75970000 1871400 0 0 0 0 0 0 0 0 0 0 0 0 43319 1307 38793 361549;361550;361551;361552;361553;361554;361555 285694;285695;285696;285697;285698;285699;285700;285701;285702;285703 285701 10 RAESMLQQADK Oxidation (M) 1291.619 0.61904908 986 P13797 PLS3 Plastin-3 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.13 3.82 16 1 30 6 5 6 3 2 3 2 2 2 2 2 4 2 2 4 11.075 9.92 2;3 0.00027418 10735 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 98.943 70.93 1431100000 656940000 126280000 351330000 20370000 7390100 24387000 16854000 7590700 9863200 16865000 53988000 51412000 18769000 17054000 52061000 43320 986 38794 361556;361557;361558;361559;361560;361561;361562;361563;361564;361565;361566;361567;361568;361569;361570;361571;361572;361573;361574;361575;361576;361577;361578;361579;361580;361581;361582;361583;361584;361585;361586;361587;361588;361589;361590;361591;361592;361593;361594;361595;361596;361597;361598;361599;361600;361601;361602 285704;285705;285706;285707;285708;285709;285710;285711;285712;285713;285714;285715;285716;285717;285718;285719;285720;285721;285722;285723;285724;285725 285712 1338 12 RAESMLQQADK Unmodified 1275.6241 0.62413446 986 P13797 PLS3 Plastin-3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.65 3.6 5 1 14 2 2 2 1 1 1 1 1 1 1 1 1 1 2 2 23.176 22.002 2;3 1.1922E-29 28437 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 211.37 167.02 2365600000 1605700000 111310000 173480000 19812000 13846000 67412000 25675000 18531000 18461000 0 42712000 47475000 23467000 74611000 123110000 43321 986 38794 361603;361604;361605;361606;361607;361608;361609;361610;361611;361612;361613;361614;361615;361616;361617;361618;361619;361620;361621;361622 285726;285727;285728;285729;285730;285731;285732;285733;285734;285735;285736;285737;285738;285739;285740;285741;285742;285743;285744;285745;285746;285747;285748 285742 20 RAETFAGYDCTNSPTK Unmodified 1816.805 0.80501195 3012 Q6ZSZ5 ARHGEF18 Rho guanine nucleotide exchange factor 18 yes yes 0 0 1 By matching By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 35.591 35.768 3 0.0025175 38396 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 27.224 24.938 37730000 0 0 0 2460900 0 4170800 4133800 3475400 4675300 3005100 6128500 0 4398200 0 5281900 43322 3012 38795 361623;361624;361625;361626;361627;361628;361629;361630;361631 285749;285750 285749 2 RAETFGGFDSHQMNASK Unmodified 1881.8428 0.84279444 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 40.625 40.883 3 1.7506E-29 44427 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.371 85.029 60689000 0 0 0 3895900 0 5354400 0 0 3328500 4764400 7264700 11325000 0 7311900 17445000 43323 2193 38796 361632;361633;361634;361635;361636;361637;361638;361639;361640 285751;285752;285753;285754;285755;285756;285757 285753 7 RAEVDEEHRK Unmodified 1267.6269 0.62691165 3501 Q8TDH9 BLOC1S5 Biogenesis of lysosome-related organelles complex 1 subunit 5 yes yes 0 0 2 By MS/MS 2 0 1 1 5.5587 2.1812 3 0.0080412 5053 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 91.937 79.361 16932000 16932000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43324 3501 38797 361641 285758 285758 1 RAEVNGLAAQGK Unmodified 1212.6575 0.65748349 897 P09972 ALDOC Fructose-bisphosphate aldolase C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 2 2 2 21.701 17.88 2;3 0.0044365 22611 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 42.446 34.879 245070000 194140000 14050000 36877000 0 0 0 0 0 0 0 0 0 0 0 0 43325 897 38798 361642;361643;361644;361645;361646;361647 285759;285760;285761;285762;285763 285763 4 RAEWPETQGAVTEEEGSGQSEAR Unmodified 2503.1211 0.12113737 2340 Q13671 RIN1 Ras and Rab interactor 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 2 46.281 46.65 3 4.687E-27 52628 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 88.79 78.391 23651000 0 0 0 0 0 0 0 0 0 6111900 0 0 7481400 4659800 5397700 43326 2340 38799 361648;361649;361650;361651;361652 285764;285765;285766;285767 285767 4 RAEYFDGSEPVQNR Unmodified 1666.7699 0.76994707 4521 Q9HCS7 XAB2 Pre-mRNA-splicing factor SYF1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.28 37.46 3 0.00012738 40384 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 72.175 66.691 110220000 0 0 0 4959100 6129500 7019500 5847900 6510400 6927600 9511200 10540000 14868000 13063000 9000400 15840000 43327 4521 38800 361653;361654;361655;361656;361657;361658;361659;361660;361661;361662;361663;361664 285768;285769;285770;285771;285772;285773;285774;285775;285776;285777;285778;285779 285775 12 RAFLIEEQK Unmodified 1132.6241 0.6240581 1562 P49207 RPL34 60S ribosomal protein L34 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 40.621 40.179 2 0.001381 58754 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 125.98 48.698 514730000 81951000 0 0 19285000 16895000 30230000 20364000 20216000 28764000 40159000 33407000 56877000 50781000 39351000 76445000 43328 1562 38801 361665;361666;361667;361668;361669;361670;361671;361672;361673;361674;361675;361676;361677 285780;285781;285782;285783;285784 285781 2 RAGAPVGGSPGLAK Unmodified 1236.6939 0.693869 3006 Q6ZRS2 SRCAP Helicase SRCAP yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 24.036 24.199 3 0.034036 25837 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 18.102 4.373 45293000 0 0 0 3783700 5406900 3697800 0 4706000 4973200 3429900 8142500 4791400 6361700 0 0 43329 3006 38802 361678;361679;361680;361681;361682;361683;361684;361685;361686 285785 285785 1 RAGDELAYNSSSACASSR Unmodified 1900.8334 0.83335196 3203 Q86Y37 CACUL1 CDK2-associated and cullin domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 2 28.421 28.607 3 1.012E-05 30112 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 52.19 49.927 29318000 0 0 0 0 2712200 5941200 4587400 0 0 0 6432900 0 0 7157300 2486900 43330 3203 38803 361687;361688;361689;361690;361691;361692;361693 285786;285787;285788;285789;285790 285789 5 RAGELTEDEVER Unmodified 1402.6688 0.66883604 1885 P62269 RPS18 40S ribosomal protein S18 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 25.556 25.757 2;3 1.7195E-08 27356 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 101.32 78.094 2772400000 0 0 0 198350000 193400000 221710000 155160000 129030000 126320000 238110000 248150000 329530000 314570000 323110000 294930000 43331 1885 38804 361694;361695;361696;361697;361698;361699;361700;361701;361702;361703;361704;361705;361706;361707;361708;361709;361710;361711;361712;361713;361714;361715;361716;361717 285791;285792;285793;285794;285795;285796;285797;285798;285799;285800;285801;285802;285803;285804;285805;285806;285807;285808;285809;285810 285807 20 RAGGEESQFEMDI Oxidation (M) 1483.6249 0.62492232 2311 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 57.935 52.245 2 1.9386E-20 67772 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 141.88 140.28 182710000 15515000 161090000 6106500 0 0 0 0 0 0 0 0 0 0 0 0 43332 2311 38805 361718;361719;361720;361721 285811;285812;285813;285814 285811 3773 4 RAGGEESQFEMDI Unmodified 1467.63 0.63000769 2311 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS 5.2 3.92 3 2 1 2 1 1 72.628 69.141 2 0.0074949 88135 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.801 64.547 290890000 34987000 242990000 0 0 0 0 0 0 0 0 2555400 0 0 0 10363000 43333 2311 38805 361722;361723;361724;361725;361726 285815;285816;285817;285818 285815 3 RAGLMLQEADK Unmodified 1230.6391 0.63905624 2421 Q14651 PLS1 Plastin-1 yes yes 0 0 1 By MS/MS 2 0 1 1 44.937 38.072 2 0.00057855 52063 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 105.98 64.527 23654000 23654000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43334 2421 38806 361727 285819 285819 1 RAGSFTGTSDPEAAPAR Unmodified 1689.8071 0.80706086 5200 Q9Y4F5 CEP170B Centrosomal protein of 170 kDa protein B yes yes 0 0 1 By matching By matching By MS/MS 10 0 3 1 1 1 28.585 29.164 3 0.0036216 30538 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 28.627 20.252 31257000 0 0 0 0 0 0 0 0 0 0 0 6286200 14137000 0 10835000 43335 5200 38807 361728;361729;361730 285820 285820 1 RAHELIEAEGIEDIEK Unmodified 1850.9374 0.93740633 4697 Q9NWH9 SLTM SAFB-like transcription modulator yes yes 0 0 1 By MS/MS 2 0 2 2 73.201 65.005 3;4 0.00070195 86096 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.691 53.891 11592000 11592000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43336 4697 38808 361731;361732 285821;285822 285822 1 RAHGCFPEGR Unmodified 1185.5462 0.54615891 3108 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.662 11.838 3 0.025863 10179 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 42.802 30.743 68938000 0 0 0 3283100 0 2716500 2853800 4882800 3359900 5159900 2106300 13619000 9028600 8078500 13850000 43337 3108 38809 361733;361734;361735;361736;361737;361738;361739;361740;361741;361742;361743 285823 285823 0 RAHTEEPQAK Unmodified 1165.584 0.5839842 4086 Q9BQ52 ELAC2 Zinc phosphodiesterase ELAC protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 2 1 1 4.4526 1.3538 3 0.0010675 2560 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 90.05 72.217 2522600000 2479300000 35335000 7909300 0 0 0 0 0 0 0 0 0 0 0 0 43338 4086 38810 361744;361745;361746;361747 285824;285825;285826;285827;285828 285824 5 RAIELATTLDESLTNR Unmodified 1801.9534 0.95339074 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 0 1 By matching By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 76.141 76.312 3 7.2798E-05 87990 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 50.966 41.683 24263000 0 0 0 0 0 0 0 0 2796900 8345000 7463500 5657500 0 0 0 43339 4226 38811 361748;361749;361750;361751 285829 285829 1 RAIEQESQMSLK Unmodified 1418.7188 0.71876312 1738 P54277 PMS1 PMS1 protein homolog 1 yes yes 0 0 1 By MS/MS 2 0 1 1 39.483 32.86 3 0.0029998 45740 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.827 47.018 8929300 8929300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43340 1738 38812 361752 285830 285830 1 RAIILAAAPGEK Unmodified 1208.7241 0.7241065 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 45.998 46.154 3 0.011672 52578 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 26.359 19.923 22481000 0 0 0 0 2368900 2959800 3071100 0 1932500 3783100 2908500 0 0 0 5457500 43341 1201 38813 361753;361754;361755;361756;361757;361758;361759 285831;285832;285833;285834 285834 3 RAISTPETPLTK Unmodified 1312.7351 0.73506511 2385 Q14181 POLA2 DNA polymerase alpha subunit B yes yes 0 0 1 By MS/MS By matching By MS/MS 2 0 5 2 1 2 48.217 42.387 2;3 3.5298E-15 58522 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 152.07 110.62 403760000 372650000 11211000 19899000 0 0 0 0 0 0 0 0 0 0 0 0 43342 2385 38814 361760;361761;361762;361763;361764 285835;285836;285837;285838;285839 285837 4 RAIVEDHSLVAEEK Unmodified 1594.8315 0.83148469 247 O15066 KIF3B Kinesin-like protein KIF3B;Kinesin-like protein KIF3B, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 6 4 2 2 1 1 1 1 38.498 36.076 3 2.9559E-44 51641 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 148.7 84.941 56455000 33729000 0 5767700 0 0 8201600 0 0 0 0 0 0 0 0 8756800 43343 247 38815 361765;361766;361767;361768 285840;285841;285842;285843;285844 285843 5 RAIVHDNK Unmodified 951.52501 0.52501276 487 O75369 FLNB Filamin-B yes yes 0 0 1 By MS/MS 2 0 1 1 5.5587 2.1812 2 0.0234 5014 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 177.78 123.25 422280000 422280000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43344 487 38816 361769 285845 285845 0 RALAAQLPVLPR Unmodified 1303.8088 0.80883918 3855 Q96GK7 FAHD2A Fumarylacetoacetate hydrolase domain-containing protein 2A yes yes 0 0 1 By MS/MS 10 0 1 1 71.243 71.645 3 0.018498 81912 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 31.348 17.09 3405400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3405400 43345 3855 38817 361770 285846 285846 1 RALANSLACQGK Unmodified 1287.6718 0.67175335 771 P04075 ALDOA Fructose-bisphosphate aldolase A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 3 24 2 1 2 2 2 2 2 2 2 2 2 2 2 2 23.261 22.866 2;3 1.1059E-13 34418 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 163.9 67.23 3235300000 1036500000 15617000 0 69897000 23144000 29312000 39004000 28999000 27028000 55171000 282250000 518820000 50710000 220570000 838320000 43346 771 38818 361771;361772;361773;361774;361775;361776;361777;361778;361779;361780;361781;361782;361783;361784;361785;361786;361787;361788;361789;361790;361791;361792;361793;361794;361795;361796;361797 285847;285848;285849;285850;285851;285852;285853;285854;285855;285856;285857;285858;285859;285860;285861;285862;285863;285864 285856 11 RALASIDSK Unmodified 959.53999 0.53999412 1073 P18206 VCL Vinculin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 4 8 2 1 1 1 1 1 1 1 1 1 1 19.192 17.982 2 2.8432E-05 16319 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 134.48 54.016 3611700000 3229900000 79856000 35559000 0 0 31674000 16173000 12401000 0 0 34909000 36205000 24399000 35915000 74733000 43347 1073 38819 361798;361799;361800;361801;361802;361803;361804;361805;361806;361807;361808;361809 285865;285866;285867;285868;285869;285870;285871;285872;285873;285874 285867 1 RALASNTSFFSGCSPIEEEAH Unmodified 2309.0383 0.03825936 632 O95239;Q2VIQ3 KIF4A;KIF4B Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 75.13 73.942 3 1.1081E-06 94773 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.354 44.601 50319000 16942000 0 0 0 0 0 0 0 4616700 0 0 5848400 4900400 4346800 13665000 43348 632 38820 361810;361811;361812;361813;361814;361815 285875;285876;285877 285877 3 RALDDDEDVK Unmodified 1174.5466 0.54659564 1238 P28715 ERCC5 DNA repair protein complementing XP-G cells yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 14 2 1 2 2 1 1 1 1 1 1 1 14.486 14.595 2;3 0.01815 13372 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.533 43.424 74349000 0 0 0 6340000 4838100 10012000 8192100 5369300 4085900 2400300 3351900 10753000 0 6977600 12028000 43349 1238 38821 361816;361817;361818;361819;361820;361821;361822;361823;361824;361825;361826;361827;361828;361829 285878;285879;285880;285881;285882;285883 285879 6 RALDFTDSQENEEK Unmodified 1680.7591 0.75910761 584 O94782 USP1 Ubiquitin carboxyl-terminal hydrolase 1 yes yes 0 0 1 By MS/MS By matching 10 0 2 1 1 34.646 35.244 3 0.016469 38483 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 29.407 12.125 22822000 0 0 0 0 0 0 0 0 0 0 7864100 0 0 0 14958000 43350 584 38822 361830;361831 285884 285884 1 RALDVIQAGK Unmodified 1069.6244 0.62439245 562 O75937 DNAJC8 DnaJ homolog subfamily C member 8 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 36.193 35.057 2 0.0040794 37181 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 134.66 91.823 364920000 220640000 0 1490100 0 0 0 0 0 0 10319000 32878000 28910000 0 18235000 52443000 43351 562 38823 361832;361833;361834;361835;361836;361837;361838 285885;285886;285887;285888;285889 285889 5 RALEEEEGGTEVLSK Unmodified 1645.8159 0.81589421 2924 Q6P1R4 DUS1L tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 38.922 37.783 3 9.4747E-05 47612 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 68.329 37.846 51265000 0 15542000 19403000 0 0 0 0 0 0 2252600 0 4910100 4004700 0 5151900 43352 2924 38824 361839;361840;361841;361842;361843;361844 285890;285891;285892;285893;285894 285892 4 RALELEQERK Unmodified 1270.6993 0.69934831 1198 P26038 MSN Moesin yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 17.008 17.439 3 0.02132 16328 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.344 51.571 60139000 0 0 0 0 0 0 0 0 0 0 7535200 9348500 4490900 7700300 31064000 43353 1198 38825 361845;361846;361847;361848;361849 285895;285896 285895 0 RALEQQVEEMK Oxidation (M) 1375.6766 0.67656396 1356 P35579 MYH9 Myosin-9 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.1 3.36 8 2 31 1 5 4 2 2 3 2 3 2 3 3 3 3 3 2 21.677 21.028 2;3 1.5735E-08 27333 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 133.23 114.55 4411600000 8734300 89478000 340250000 200230000 230570000 382770000 267060000 279700000 247990000 403250000 361830000 662830000 519470000 254950000 162500000 43354 1356 38826 361850;361851;361852;361853;361854;361855;361856;361857;361858;361859;361860;361861;361862;361863;361864;361865;361866;361867;361868;361869;361870;361871;361872;361873;361874;361875;361876;361877;361878;361879;361880;361881;361882;361883;361884;361885;361886;361887;361888;361889;361890 285897;285898;285899;285900;285901;285902;285903;285904;285905;285906;285907;285908;285909;285910;285911;285912;285913;285914;285915;285916;285917;285918;285919;285920;285921;285922;285923;285924;285925;285926;285927;285928;285929;285930;285931 285919 2068 29 RALEQQVEEMK Unmodified 1359.6816 0.68164933 1356 P35579 MYH9 Myosin-9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.22 6 1 26 2 3 2 2 2 2 2 2 2 2 4 2 2 2 2 37.541 36.61 2;3 9.8268E-22 38967 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 198.62 171.37 5483700000 79316000 257250000 144970000 276340000 291000000 465060000 443300000 291010000 289680000 378300000 422460000 753680000 353880000 407120000 630320000 43355 1356 38826 361891;361892;361893;361894;361895;361896;361897;361898;361899;361900;361901;361902;361903;361904;361905;361906;361907;361908;361909;361910;361911;361912;361913;361914;361915;361916;361917;361918;361919;361920;361921;361922;361923 285932;285933;285934;285935;285936;285937;285938;285939;285940;285941;285942;285943;285944;285945;285946;285947;285948;285949;285950;285951;285952;285953;285954;285955;285956;285957;285958;285959;285960;285961;285962;285963;285964;285965;285966;285967 285958 27 RALERDPTEDDVESK Unmodified 1758.8384 0.83842057 3208 Q86YP4 GATAD2A Transcriptional repressor p66-alpha yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 3 18 2 1 1 2 2 2 2 2 2 1 1 1 2 21.899 21.37 3;4 1.7427E-09 30650 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.57 74.112 158170000 26647000 0 8271400 7561000 9181800 17771000 12783000 11379000 11975000 13850000 9497300 0 8636900 6900300 13720000 43356 3208 38827 361924;361925;361926;361927;361928;361929;361930;361931;361932;361933;361934;361935;361936;361937;361938;361939;361940;361941;361942;361943;361944 285968;285969;285970;285971;285972;285973;285974;285975;285976;285977;285978;285979;285980;285981 285976 13 RALGAHLEAEPK Unmodified 1290.7044 0.70443369 4652 Q9NUQ3 TXLNG Gamma-taxilin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 25.019 24.674 3 8.3322E-06 26024 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 84.718 63.861 371560000 89089000 0 0 9252800 0 41802000 25919000 20962000 34249000 21425000 33649000 27365000 0 28890000 38954000 43357 4652 38828 361945;361946;361947;361948;361949;361950;361951;361952;361953;361954;361955 285982;285983;285984;285985;285986;285987;285988;285989;285990;285991;285992;285993;285994;285995;285996;285997 285982 14 RALIAGGGAPEIELALR Unmodified 1705.9839 0.98390301 1642 P50991 CCT4 T-complex protein 1 subunit delta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 81.298 81.421 3 0.01413 93655 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 26.837 20.4 41087000 0 0 0 0 0 3492400 0 0 4557700 7045300 0 0 0 4298900 21693000 43358 1642 38829 361956;361957;361958;361959;361960 285998;285999;286000 286000 2 RALIESYQNLTR Unmodified 1462.7892 0.78922595 3297 Q8IZP0 ABI1 Abl interactor 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 56.15 56.406 3 0.0029713 63063 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.107 30.163 25446000 0 0 0 0 0 4271800 0 0 0 6119300 0 0 0 4866700 10188000 43359 3297 38830 361961;361962;361963;361964 286001;286002;286003 286002 3 RALIGDDVGLTSYK Unmodified 1506.8042 0.80420731 2699 Q53F19 C17orf85 Uncharacterized protein C17orf85 yes yes 0 0 1 By MS/MS 2 0 1 1 73.477 65.281 3 0.00025913 86408 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.722 61.664 27758000 27758000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43360 2699 38831 361965 286004 286004 1 RALLNLPGTQTSGEAK Unmodified 1654.9002 0.90023296 3857 Q96GM8 TOE1 Target of EGR1 protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 57.174 57.376 3 0.00040746 65592 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 38.264 27.319 119990000 0 0 0 0 6218600 14450000 0 6556000 7975600 9649300 10746000 16938000 11939000 16385000 19130000 43361 3857 38832 361966;361967;361968;361969;361970;361971;361972;361973;361974;361975;361976 286005;286006;286007;286008;286009;286010;286011;286012;286013;286014;286015;286016;286017 286014 13 RALMGSPQLVAAVVR Oxidation (M) 1582.8977 0.89773054 1010 P14923 JUP Junction plakoglobin yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 68.26 68.371 3 0.001019 78133 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 43.69 37.527 23284000 0 0 0 0 2106400 0 3944000 0 0 0 3758200 6837000 4768900 1869100 0 43362 1010 38833 361977;361978;361979;361980;361981;361982 286018 286018 1390 1 RALPEFFNGK Unmodified 1177.6244 0.62439245 3687;3475 Q8TAQ2;Q92922 SMARCC2;SMARCC1 SWI/SNF complex subunit SMARCC2;SWI/SNF complex subunit SMARCC1 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 59.31 59.45 2 0.049344 66768 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.568 41.009 45232000 0 0 0 3781300 0 5994500 2263800 4432500 3488800 4943000 0 4340500 5114900 0 10872000 43363 3475;3687 38834 361983;361984;361985;361986;361987;361988;361989;361990;361991 286019 286019 1 RALQFQGK Unmodified 946.53485 0.53484916 2097;913 Q03468;P0DP91 ERCC6 DNA excision repair protein ERCC-6 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.098 19.294 2 0.017466 18271 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 116.3 67.738 168200000 0 0 0 12400000 12016000 14747000 10953000 8145300 8620700 19495000 17119000 17781000 17304000 11025000 18598000 43364 2097;913 38835 361992;361993;361994;361995;361996;361997;361998;361999;362000;362001;362002;362003 286020 286020 0 RALQGDYDQSR Unmodified 1307.6218 0.62182627 5278 Q9Y6D9 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 14.598 14.833 3 0.014459 13566 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.98 40.836 87137000 0 0 0 8109300 0 0 6488300 0 7174300 0 14161000 9572900 9380000 7271400 24979000 43365 5278 38836 362004;362005;362006;362007;362008;362009;362010;362011 286021;286022;286023 286021 0 RALSSQHQAR Unmodified 1152.6112 0.611202 932 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 0.83154 0.94675 3 0.02683 987 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 33.088 23.084 4532000 0 0 0 0 1581400 0 1768500 119150 981670 0 44791 0 36457 0 0 43366 932 38837 362012;362013;362014;362015;362016;362017 286024 286024 1 RALSTPVVEK Unmodified 1098.6397 0.63970816 1242 P29084 GTF2E2 Transcription initiation factor IIE subunit beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.039 28.234 2 0.035002 30456 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 84.213 48.857 138650000 0 0 0 8894900 8526300 9770800 12260000 9737300 6490800 14113000 20402000 12806000 13574000 8652900 13420000 43367 1242 38838 362018;362019;362020;362021;362022;362023;362024;362025;362026;362027;362028;362029 286025;286026 286026 1 RALTDPIQGTEYSAESLVR Unmodified 2105.0753 0.075296793 4869 Q9UDY8 MALT1 Mucosa-associated lymphoid tissue lymphoma translocation protein 1 yes yes 0 0 1 By matching By matching By MS/MS 10 0 3 1 1 1 76.464 76.59 3 0.0013586 87974 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.454 21.032 19299000 0 0 0 0 0 2407600 0 0 0 4320800 0 0 0 0 12570000 43368 4869 38839 362030;362031;362032 286027 286027 1 RALVFQPVAELK Unmodified 1369.8082 0.80817048 861 P08237 PFKM ATP-dependent 6-phosphofructokinase, muscle type yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 73.276 73.344 2;3 0.0023164 83717 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 93.058 45.86 1333000000 0 0 0 43333000 54507000 155680000 57534000 80947000 99808000 119650000 107380000 172110000 90427000 121160000 230440000 43369 861 38840 362033;362034;362035;362036;362037;362038;362039;362040;362041;362042;362043;362044;362045;362046;362047;362048;362049;362050;362051;362052;362053;362054;362055;362056 286028;286029;286030;286031;286032;286033;286034;286035;286036;286037;286038;286039;286040;286041;286042;286043;286044;286045;286046;286047;286048;286049;286050;286051 286043 15 RALVILAK Unmodified 882.60147 0.60147217 4015 Q99497 PARK7 Protein deglycase DJ-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 42.57 43.082 2 0.017416 47546 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 114.19 38.875 696260000 0 0 0 0 0 0 0 0 0 0 118160000 159610000 14284000 83161000 321050000 43370 4015 38841 362057;362058;362059;362060;362061 286052 286052 0 RANEFLEVGK Unmodified 1161.6142 0.6142217 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.65 3.65 5 12 2 1 2 1 1 1 1 1 1 1 1 1 1 1 1 43.882 42.278 2;3 0.0010899 60469 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.171 65.799 675250000 466560000 7218600 17278000 7636400 7041800 12080000 8035600 8954900 9316900 17449000 19533000 25310000 20135000 18600000 30104000 43371 2378 38842 362062;362063;362064;362065;362066;362067;362068;362069;362070;362071;362072;362073;362074;362075;362076;362077;362078 286053;286054;286055;286056;286057;286058 286056 3 RANNNAAVAPTTCPLQPVTDPFAFSR Unmodified 2814.3871 0.38714565 242 O15027 SEC16A Protein transport protein Sec16A yes yes 0 0 1 By MS/MS 10 0 1 1 83.041 83.231 3 1.4124E-05 96042 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.507 40.554 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43372 242 38843 362079 286059 286059 1 RANPQVGVAFPHIK Unmodified 1532.8576 0.85758029 974 P13010 XRCC5 X-ray repair cross-complementing protein 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 1 2 1 1 2 2 1 1 2 2 2 57.651 57.855 3;4 2.2272E-14 65030 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 114.87 109.55 534160000 0 0 0 0 8588600 45122000 16034000 25240000 42365000 37035000 27585000 50063000 36339000 52755000 193030000 43373 974 38844 362080;362081;362082;362083;362084;362085;362086;362087;362088;362089;362090;362091;362092;362093;362094;362095;362096;362097 286060;286061;286062;286063;286064;286065;286066;286067;286068;286069;286070;286071;286072;286073;286074;286075;286076;286077;286078;286079;286080;286081;286082;286083 286068 24 RANVVTTPSTNRK Unmodified 1442.7954 0.79537396 3250 Q8IWZ3 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 11.272 11.412 3 0.0057368 8102 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 61.423 61.423 152070000 0 0 0 7430500 8316600 11248000 10155000 12843000 10227000 13275000 7379600 17764000 17876000 14498000 21062000 43374 3250 38845 362098;362099;362100;362101;362102;362103;362104;362105;362106;362107;362108;362109 286084;286085;286086;286087;286088;286089;286090 286086 4 RAPAFEGR Unmodified 902.47225 0.47224891 746 P01833 PIGR Polymeric immunoglobulin receptor;Secretory component yes yes 0 0 1 By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 14.092 14.219 2 0.041757 13552 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 103.87 103.87 62344000 0 0 0 2470100 0 2230300 2591100 2113400 1050100 40710000 6368800 0 4810100 0 0 43375 746 38846 362110;362111;362112;362113;362114;362115;362116;362117 286091 286091 0 RAPAPPPLPPAEPLAK Unmodified 1620.9352 0.9351619 5057 Q9UPS6 SETD1B Histone-lysine N-methyltransferase SETD1B yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 2 1 1 2 1 1 1 1 2 2 64.267 64.383 3 0.015255 74467 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 27.643 24.552 71272000 0 0 0 7883500 0 3217500 4565600 7238600 4360900 4905500 5122200 9574100 13354000 0 11050000 43376 5057 38847 362118;362119;362120;362121;362122;362123;362124;362125;362126;362127;362128;362129;362130;362131 286092;286093;286094;286095;286096;286097 286097 3 RAPASSAPQPK Unmodified 1108.5989 0.59890598 2518 Q15345 LRRC41 Leucine-rich repeat-containing protein 41 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.9725 7.0961 2 0.0099644 5278 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 74.267 43.193 63966000 0 0 0 3803300 3844700 5868200 4402400 3726600 4206500 5199500 10637000 4044200 5595300 5683700 6954400 43377 2518 38848 362132;362133;362134;362135;362136;362137;362138;362139;362140;362141;362142;362143 286098 286098 1 RAPEEELPPLDPEEIRK Unmodified 2017.048 0.04801941 3276 Q8IY67 RAVER1 Ribonucleoprotein PTB-binding 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 67.094 67.176 3;4 1.2491E-07 78226 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 79.805 65.11 1473000000 0 0 0 41251000 46930000 127690000 59493000 111510000 109600000 113780000 128790000 217730000 126420000 133720000 256120000 43378 3276 38849 362144;362145;362146;362147;362148;362149;362150;362151;362152;362153;362154;362155;362156;362157;362158;362159;362160;362161;362162;362163;362164;362165;362166;362167 286099;286100;286101;286102;286103;286104;286105;286106;286107;286108;286109;286110;286111;286112;286113;286114;286115;286116;286117;286118;286119;286120;286121;286122;286123;286124;286125;286126;286127;286128 286125 26 RAPFDLFENK Unmodified 1235.6299 0.62987176 862 P08238;Q58FF7 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 2 2 2 1 2 2 2 2 2 2 73.13 73.276 2;3 0.0015844 84379 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 71.03 50.827 592750000 0 0 0 0 8285400 67302000 20460000 41947000 19371000 43729000 58117000 56277000 43792000 56721000 176750000 43379 862 38850 362168;362169;362170;362171;362172;362173;362174;362175;362176;362177;362178;362179;362180;362181;362182;362183;362184;362185;362186;362187 286129;286130;286131;286132;286133;286134;286135;286136;286137;286138;286139;286140;286141;286142 286130 9 RAPFDLFENKK Unmodified 1363.7248 0.72483478 862 P08238;Q58FF7 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 61.467 61.756 3 1.6447E-05 69268 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 119.27 99.616 84193000 0 0 0 0 0 8475100 0 0 2984600 3451000 4195900 9283800 0 0 55803000 43380 862 38851 362188;362189;362190;362191;362192;362193 286143;286144;286145 286144 3 RAPFDLFENR Unmodified 1263.636 0.63601977 850 P07900 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 2 1 2 74.633 74.701 2;3 0.002543 85268 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.344 46.898 50510000 0 0 0 1650900 0 6091300 0 0 0 0 0 0 5993500 3241700 33532000 43381 850 38852 362194;362195;362196;362197;362198;362199;362200 286146;286147;286148;286149;286150 286147 4 RAPFDLFENRK Unmodified 1391.731 0.73098279 850 P07900 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 0 0 2 By MS/MS By matching By MS/MS 10 0 3 1 1 1 63.259 63.597 3 0.018406 72321 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.802 45.656 56881000 0 0 0 0 0 7119200 0 0 0 0 0 5753000 0 0 44009000 43382 850 38853 362201;362202;362203 286151;286152;286153;286154 286154 3 RAPQCYPSSVNSAR Unmodified 1591.7525 0.75252287 4467 Q9H9A5 CNOT10 CCR4-NOT transcription complex subunit 10 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.673 23.878 3 0.00038148 25598 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 48.704 34.272 56266000 0 0 0 3208300 3613900 3311900 2374300 3948200 2905700 4112300 6648800 6496200 6218100 5301300 8127500 43383 4467 38854 362204;362205;362206;362207;362208;362209;362210;362211;362212;362213;362214;362215 286155;286156;286157;286158;286159;286160;286161;286162;286163;286164;286165;286166;286167 286167 13 RAPQMDWSK Unmodified 1117.5339 0.53386288 209 O14745 SLC9A3R1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 yes yes 0 0 1 By MS/MS 2 0 1 1 38.516 31.954 2 0.017315 44494 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 113.18 63.586 75771000 75771000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43384 209 38855 362216 286168 286168 1 RAPQMDWSK Oxidation (M) 1133.5288 0.52877751 209 O14745 SLC9A3R1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 yes yes 0 1 1 By MS/MS 2 0 1 1 19.301 14.717 2 0.024083 21410 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.1 40.744 41434000 41434000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43385 209 38855 362217 286169 286169 0 RAPQTYEK Unmodified 991.50869 0.50869399 3444 Q8NFD5 ARID1B AT-rich interactive domain-containing protein 1B yes yes 0 0 1 By MS/MS By matching 2 0 2 1 1 7.3542 4.4879 2 0.039513 7692 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.41 68.906 53536000 44059000 0 9477200 0 0 0 0 0 0 0 0 0 0 0 0 43386 3444 38856 362218;362219 286170 286170 1 RAPSSVAHTSMSDNGGFK Unmodified 1847.8584 0.8584445 5250 Q9Y5U2 TSSC4 Protein TSSC4 yes yes 0 0 1 By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 28.168 28.577 3 0.0014241 29757 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 26.237 16.138 23690000 0 0 0 0 0 0 1694200 0 0 3682100 6378600 4106000 0 0 7829400 43387 5250 38857 362220;362221;362222;362223;362224;362225 286171;286172;286173 286171 3 RAQATAQDPVFQK Unmodified 1458.7579 0.75792582 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 0 1 By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 28.068 28.408 2 0.0071563 30167 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 68.893 41.564 22655000 0 0 0 0 0 1463700 1509500 0 0 1922700 5262900 5395900 3106900 0 3993000 43388 5189 38858 362226;362227;362228;362229;362230;362231;362232 286174;286175;286176 286176 3 RAQAWCYSK Unmodified 1168.5448 0.54476192 1647 P51149 RAB7A Ras-related protein Rab-7a yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 22.584 22.789 2;3 0.021301 22706 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 30.204 17.627 375350000 0 0 0 16234000 12549000 17129000 13550000 26582000 17068000 29365000 48971000 72037000 41331000 36422000 44111000 43389 1647 38859 362233;362234;362235;362236;362237;362238;362239;362240;362241;362242;362243;362244;362245;362246;362247;362248;362249;362250;362251;362252;362253;362254;362255;362256 286177;286178;286179;286180;286181 286177 4 RAQEAEEAGAALRTAR Unmodified 1698.8761 0.87614348 2480 Q15027 ACAP1 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 1 2 2 2 2 2 2 2 2 2 2 2 32.137 32.348 3;4 7.4535E-05 34590 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 96.247 75.82 1370200000 0 0 0 32363000 38062000 53752000 49384000 68697000 45110000 70080000 194840000 273510000 106370000 117210000 320810000 43390 2480 38860 362257;362258;362259;362260;362261;362262;362263;362264;362265;362266;362267;362268;362269;362270;362271;362272;362273;362274;362275;362276;362277;362278;362279 286182;286183;286184;286185;286186;286187;286188;286189;286190;286191;286192 286190 3 RAQEDISR Unmodified 973.49411 0.49410656 2816;463 Q5VTR2;O75150 RNF20;RNF40 E3 ubiquitin-protein ligase BRE1A;E3 ubiquitin-protein ligase BRE1B no no 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 6.2222 6.2905 2 0.047004 3914 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 128.36 43.793 58682000 0 0 0 5931800 6734800 7844300 9707200 8996100 8528000 3405100 0 4104900 0 3430000 0 43391 2816;463 38861 362280;362281;362282;362283;362284;362285;362286;362287;362288 286193 286193 1 RAQEEAERLEADR Unmodified 1571.7652 0.76519604 1017 P15311 EZR Ezrin yes yes 0 0 2 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 21.13 21.522 3 0.0055434 21262 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.918 22.131 221550000 0 0 0 0 0 0 0 0 11723000 0 42459000 0 18115000 63135000 86121000 43392 1017 38862 362289;362290;362291;362292;362293 286194;286195;286196 286194 2 RAQELEGK Unmodified 929.49304 0.49304393 4094 Q9BQE5 APOL2 Apolipoprotein L2 yes yes 0 0 1 By matching By MS/MS 2 0 2 1 1 6.5199 3.7896 2 0.028331 5397 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 113.5 44.717 127360000 0 5396500 121970000 0 0 0 0 0 0 0 0 0 0 0 0 43393 4094 38863 362294;362295 286197 286197 0 RAQEYDSSFPNWEFAR Unmodified 2001.8969 0.8969385 4043 Q99661 KIF2C Kinesin-like protein KIF2C yes yes 0 0 1 By MS/MS 10 0 1 1 76.725 77.012 3 0.0062533 88458 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 31.647 27.12 5897000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5897000 43394 4043 38864 362296 286198 286198 1 RAQGGDGVLDATGEEANSNAENPK Unmodified 2399.0949 0.094922616 2914 Q6P158 DHX57 Putative ATP-dependent RNA helicase DHX57 yes yes 0 0 1 By matching By MS/MS By matching 10 0 3 1 1 1 36.957 37.214 3 0.00044294 41196 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 34.04 31.278 9372400 0 0 0 0 0 0 0 0 2380000 0 0 0 4070800 2921600 0 43395 2914 38865 362297;362298;362299 286199 286199 0 RAQLSQYFDAVK Unmodified 1424.7412 0.74121312 5123 Q9Y2W2 WBP11 WW domain-binding protein 11 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 2 2 2 2 2 2 2 2 2 1 64.392 64.581 2;3 0.00019304 73667 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 91.549 58.55 150360000 0 0 0 0 1966300 6045200 10410000 15392000 6699300 7983900 26240000 32323000 17255000 4628200 21417000 43396 5123 38866 362300;362301;362302;362303;362304;362305;362306;362307;362308;362309;362310;362311;362312;362313;362314;362315;362316;362317;362318;362319 286200;286201;286202;286203;286204;286205;286206;286207;286208;286209;286210;286211;286212;286213;286214;286215 286215 13 RAQQPAPAPAPLGTPVK Unmodified 1697.9577 0.95768826 3728 Q969V6 MKL1 MKL/myocardin-like protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 52.096 46.106 3 0.0031637 63544 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.623 31.938 50154000 45954000 0 4199900 0 0 0 0 0 0 0 0 0 0 0 0 43397 3728 38867 362320;362321 286216 286216 0 RAQSELAAHQK Unmodified 1237.6527 0.65273247 1193 P25786 PSMA1 Proteasome subunit alpha type-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 6.9 3.81 6 2 12 3 3 2 1 1 1 1 1 1 1 1 1 1 1 1 6.5278 5.3495 2;3 6.3584E-06 3771 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 128.88 119.23 8954500000 8253900000 248620000 174690000 27565000 8685200 11377000 14821000 14882000 11425000 14165000 34487000 32043000 10694000 13539000 83578000 43398 1193 38868 362322;362323;362324;362325;362326;362327;362328;362329;362330;362331;362332;362333;362334;362335;362336;362337;362338;362339;362340;362341 286217;286218;286219;286220;286221;286222;286223;286224;286225;286226;286227;286228;286229;286230;286231;286232;286233;286234;286235 286218 18 RAQTGSGGADPTTDVSGQS Unmodified 1790.8031 0.80309769 456 O75122 CLASP2 CLIP-associating protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.103 20.304 2 2.5591E-52 20777 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 148.41 144.83 135790000 0 0 0 6617800 8416400 10443000 10284000 7097400 7042800 14525000 16454000 18692000 11288000 10059000 14869000 43399 456 38869 362342;362343;362344;362345;362346;362347;362348;362349;362350;362351;362352;362353 286236;286237;286238;286239;286240;286241;286242;286243;286244;286245;286246 286237 11 RAQTTNSNSSSSSDVSTHS Unmodified 1951.8468 0.84675342 3094 Q7Z460 CLASP1 CLIP-associating protein 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6.3125 6.0123 3 1.5099E-125 4117 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 162.59 159.4 191420000 32354000 0 3049000 8047500 9845600 9419300 12619000 11044000 9532600 12196000 15191000 22309000 9912700 13675000 22220000 43400 3094 38870 362354;362355;362356;362357;362358;362359;362360;362361;362362;362363;362364;362365;362366;362367;362368 286247;286248;286249;286250;286251;286252;286253;286254;286255;286256;286257;286258;286259;286260 286247 14 RARADPTVESEEAFK Unmodified 1704.8431 0.84311201 2472 Q15014 MORF4L2 Mortality factor 4-like protein 2 yes yes 0 0 2 By MS/MS 2 0 2 2 40.329 33.706 3;4 2.3676E-07 46756 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 102.65 90.857 263780000 263780000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43401 2472 38871 362369;362370 286261;286262 286262 0 RARPAEVGGMQLR Unmodified 1439.7779 0.77794976 1330 P33316 DUT Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial yes yes 0 0 2 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 30.993 31.622 3 3.176E-11 33407 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.866 48.821 99938000 0 0 0 0 0 0 0 0 0 0 17234000 40900000 0 0 41804000 43402 1330 38872 362371;362372;362373 286263;286264 286263 0 RARQINVSTDDSEVK Unmodified 1716.8755 0.87547477 303 O43172 PRPF4 U4/U6 small nuclear ribonucleoprotein Prp4 yes yes 0 0 2 By MS/MS 2 0 1 1 29.766 24.146 3 0.021918 34020 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.599 28.394 11251000 11251000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43403 303 38873 362374 286265 286265 1 RASAAAAAGGGATGHPGGGQGAENPAGLK Unmodified 2458.2061 0.20614482 2137 Q07617 SPAG1 Sperm-associated antigen 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 27.886 28.341 3;4 1.0276E-12 29542 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 50.029 42.037 25255000 0 0 0 0 0 0 0 0 0 0 6011200 0 5458300 8026200 5759600 43404 2137 38874 362375;362376;362377;362378 286266;286267;286268;286269 286268 4 RASAYEALEK Unmodified 1136.5826 0.58258722 2577 Q15785 TOMM34 Mitochondrial import receptor subunit TOM34 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 24.41 24.569 2 0.012885 26352 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 90.15 18.012 100980000 0 0 0 13096000 8012600 9222000 9028500 0 6019000 8025800 10870000 0 11557000 7599500 17545000 43405 2577 38875 362379;362380;362381;362382;362383;362384;362385;362386;362387;362388 286270;286271;286272 286271 3 RASEDTTSGSPPK Unmodified 1331.6317 0.63172225 4278 Q9BZZ5 API5 Apoptosis inhibitor 5 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 6.3252 5.7527 3 0.0008321 5835 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.287 44.479 102710000 9833800 45265000 0 2508500 2744500 5192800 3692700 2878400 4817000 4008100 6412800 4605500 3364100 2872500 4513300 43406 4278 38876 362389;362390;362391;362392;362393;362394;362395;362396;362397;362398;362399;362400;362401;362402;362403 286273;286274;286275;286276;286277;286278;286279;286280;286281;286282;286283;286284 286276 12 RASEDTTSGSPPKK Unmodified 1459.7267 0.72668527 4278 Q9BZZ5 API5 Apoptosis inhibitor 5 yes yes 0 0 2 By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5.5943 5.2923 2;3 0.0026015 5582 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.109 63.051 321450000 208030000 0 15691000 10500000 8082800 8512800 13873000 14234000 4541300 6533700 8512700 6656600 5431800 5787400 5060900 43407 4278 38877 362404;362405;362406;362407;362408;362409;362410;362411;362412;362413;362414;362415;362416;362417 286285;286286;286287;286288 286285 3 RASFITANGVSLLK Unmodified 1475.846 0.84601255 4387 Q9H3U1 UNC45A Protein unc-45 homolog A yes yes 0 0 1 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 74.89 75.031 3 0.039461 85947 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 23.596 15.562 12187000 0 0 0 0 0 3483200 0 0 0 1695800 0 0 0 1129000 5878800 43408 4387 38878 362418;362419;362420;362421 286289 286289 1 RASGDVQTMK Unmodified 1091.5393 0.53934219 2830 Q5VZ89 DENND4C DENN domain-containing protein 4C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7.4639 6.9457 2 0.010158 10352 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 99.973 49.366 99854000 47353000 6234000 3846300 2785900 2592400 3082000 3223800 4153000 3014400 3130000 5356900 2226600 5462600 2629500 4764100 43409 2830 38879 362422;362423;362424;362425;362426;362427;362428;362429;362430;362431;362432;362433;362434;362435;362436 286290;286291;286292;286293;286294;286295 286292 6 RASGQAFELILSPR Unmodified 1543.8471 0.84707518 1043 P16949 STMN1 Stathmin yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 77.079 77.275 3 2.0951E-19 88454 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 123.76 111.38 130750000 0 0 0 0 0 0 0 2483400 4219300 0 9939500 16558000 0 11260000 86294000 43410 1043 38880 362437;362438;362439;362440;362441;362442 286296;286297;286298;286299;286300 286296 5 RASLTLEEK Unmodified 1045.5768 0.57677356 2932 Q6P3W7 SCYL2 SCY1-like protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 1 1 1 1 1 1 2 2 1 2 24.423 24.698 2 0.028463 24354 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 106.93 19.23 230190000 0 0 0 16980000 9042900 10070000 14018000 15134000 15659000 12333000 14890000 39557000 21160000 14590000 46754000 43411 2932 38881 362443;362444;362445;362446;362447;362448;362449;362450;362451;362452;362453;362454;362455;362456;362457 286301;286302 286302 1 RASPSKPASAPASR Unmodified 1381.7426 0.74261011 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.4879 6.6121 3 0.0030259 3505 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 63.727 48.696 133920000 0 0 0 8486500 11753000 1140500 10248000 7990200 1593300 10859000 22340000 18191000 11305000 11844000 18172000 43412 1226 38882 362458;362459;362460;362461;362462;362463;362464;362465;362466;362467;362468;362469 286303;286304;286305;286306;286307;286308;286309;286310;286311;286312 286308 10 RASQGLLSSIENSESDSSEAK Unmodified 2194.0349 0.034948121 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 59.938 60.104 3 9.746E-10 68883 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 74.047 69.609 29996000 0 0 0 0 0 0 5675700 5426700 0 7999200 0 0 6937700 3956700 0 43413 2804 38883 362470;362471;362472;362473;362474 286313;286314;286315;286316;286317;286318 286318 6 RASSASVPAVGASAEGTRR Unmodified 1828.9504 0.95037105 4257 Q9BZ23 PANK2 Pantothenate kinase 2, mitochondrial yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 26.548 26.67 3 0.001377 28580 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 52.644 36.245 98547000 0 0 0 13189000 16883000 19530000 0 0 0 10584000 10752000 27609000 0 0 0 43414 4257 38884 362475;362476;362477;362478;362479;362480 286319;286320 286319 0 RASSAYLAAAEDK Unmodified 1351.6732 0.67319314 4255 Q9BYX2 TBC1D2 TBC1 domain family member 2A yes yes 0 0 1 By MS/MS 2 0 2 2 38.73 32.168 2;3 0.0075379 44574 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.911 54.59 71973000 71973000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43415 4255 38885 362481;362482 286321;286322 286322 2 RASSDLSIASSEEDK Unmodified 1593.7482 0.74820857 4365 Q9H2G2 SLK STE20-like serine/threonine-protein kinase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 7.76 3.54 5 1 15 1 3 2 1 1 1 1 1 1 1 2 2 1 1 2 31.454 30.353 2;3 4.3302E-15 40164 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.54 87.001 281290000 9113400 62308000 61981000 7266900 5575200 15742000 7587200 7484000 5937200 21213000 15588000 22111000 8427500 6096600 24863000 43416 4365 38886 362483;362484;362485;362486;362487;362488;362489;362490;362491;362492;362493;362494;362495;362496;362497;362498;362499;362500;362501;362502;362503 286323;286324;286325;286326;286327;286328;286329;286330;286331;286332;286333;286334;286335 286325 9 RASSLNFLNK Unmodified 1148.6302 0.63020611 4321 Q9H0B6 KLC2 Kinesin light chain 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 2 2 1 1 2 2 1 2 2 2 46.644 46.783 2;3 0.010848 52632 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 107.57 42.322 229530000 0 0 0 12569000 12895000 18945000 16553000 11444000 13030000 22450000 21726000 17116000 30282000 24658000 27861000 43417 4321 38887 362504;362505;362506;362507;362508;362509;362510;362511;362512;362513;362514;362515;362516;362517;362518;362519;362520;362521;362522;362523;362524 286336;286337;286338;286339;286340;286341;286342;286343 286340 3 RASSQALGTIPK Unmodified 1227.6935 0.69353465 3830 Q96EZ8 MCRS1 Microspherule protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.726 30.915 2 0.022294 33325 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 45.158 28.96 81317000 0 0 0 4808400 5114100 5269900 6354700 5670700 6510300 7938400 7060700 10904000 7216000 5976900 8492800 43418 3830 38888 362525;362526;362527;362528;362529;362530;362531;362532;362533;362534;362535;362536 286344;286345 286345 1 RASTMPRLDPPEDK Unmodified 1611.8039 0.80388973 4690 Q9NW64 RBM22 Pre-mRNA-splicing factor RBM22 yes yes 0 0 2 By MS/MS 2 0 1 1 47.349 39.871 3 0.013671 55271 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.7 35.022 24249000 24249000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43419 4690 38889 362537 286346 286346 0 RATDVMIAGK Oxidation (M) 1076.5648 0.56482866 1164 P23526 AHCY Adenosylhomocysteinase yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 4 2 1 24.482 19.932 2 0.0026731 23633 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.82 54.915 2453900000 1965900000 220430000 267610000 0 0 0 0 0 0 0 0 0 0 0 0 43420 1164 38890 362538;362539;362540;362541;362542;362543;362544 286347;286348;286349;286350;286351;286352;286353;286354;286355;286356 286348 1685 7 RATDVMIAGK Unmodified 1060.5699 0.56991404 1164 P23526 AHCY Adenosylhomocysteinase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS 7.76 3.47 3 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 26.519 25.331 2 0.010794 32701 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 115.71 46.799 6135200000 5577500000 100260000 250380000 10023000 4659700 6343400 4209700 8464200 4086500 8098300 24223000 15838000 8158000 18500000 94419000 43421 1164 38890 362545;362546;362547;362548;362549;362550;362551;362552;362553;362554;362555;362556;362557;362558;362559;362560;362561 286357;286358;286359;286360;286361;286362 286359 2 RATDWEATNEAIEEQVAR Unmodified 2087.9872 0.98721007 3849 Q96G74 OTUD5 OTU domain-containing protein 5 yes yes 0 0 1 By MS/MS 10 0 1 1 66.925 67.443 3 8.9839E-10 76676 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.592 57.645 8826400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8826400 43422 3849 38891 362562 286363 286363 1 RATLENDFVVLK Unmodified 1403.7773 0.77726428 100 CON__Q7RTT2;CON__Q8N1N4-2;Q8N1N4 KRT78 Keratin, type II cytoskeletal 78 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 70.665 70.674 3 0.0044966 81590 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 33.273 24.223 + 21928000 0 0 0 3538400 0 4463600 0 5328800 0 3139400 2415600 0 3041900 0 0 43423 100 38892 362563;362564;362565;362566;362567;362568 286364;286365;286366;286367 286367 4 RATPPAHPPPR Unmodified 1195.6574 0.65742391 2755 Q5SQI0 ATAT1 Alpha-tubulin N-acetyltransferase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 9.523 9.6302 3 0.0084368 8568 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 31.597 16.209 24793000 0 0 0 1328600 1212900 1744500 2687300 1664000 0 1646200 5373900 5858100 1700900 1576400 0 43424 2755 38893 362569;362570;362571;362572;362573;362574;362575;362576;362577;362578 286368;286369;286370;286371;286372 286369 5 RATTPLYHGFK Unmodified 1289.6881 0.68805534 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 1 By MS/MS 10 0 1 1 33.963 34.273 3 0.024645 36597 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 41.218 25.277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43425 2775 38894 362579 286373 286373 1 RATVLESEGTR Unmodified 1217.6364 0.6364137 4951 Q9UJZ1 STOML2 Stomatin-like protein 2, mitochondrial yes yes 0 0 1 By matching By MS/MS By matching 10 0 3 1 1 1 17.091 17.348 3 0.0016997 16681 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 50.207 40.72 5125100 0 0 0 0 0 1059200 0 0 0 0 2351900 0 1714000 0 0 43426 4951 38895 362580;362581;362582 286374 286374 1 RATVLESEGTRESAINVAEGK Unmodified 2216.1397 0.13968796 4951 Q9UJZ1 STOML2 Stomatin-like protein 2, mitochondrial yes yes 0 0 2 By MS/MS 2 0 1 1 58.863 50.657 4 0.0023034 68940 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 39.515 29.953 10254000 10254000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43427 4951 38896 362583 286375;286376 286375 2 RATVNTFGYIAK Unmodified 1339.7248 0.72483478 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 49.946 50.129 2 0.011138 55812 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 67.704 35.486 54309000 0 0 0 0 3275900 4455800 4667900 0 0 0 7455000 0 9652000 6467000 18335000 43428 516 38897 362584;362585;362586;362587;362588;362589;362590 286377 286377 1 RATVQPPPQAAGSSNQPGLLASVPQPK Unmodified 2695.4406 0.44056143 2651 Q2M2I8 AAK1 AP2-associated protein kinase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 70.326 70.393 3 2.252E-14 81314 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 54.441 46.995 70291000 0 0 0 4207000 3249500 9987300 5935100 5287700 0 7541100 4537500 8025200 4692100 6059100 10770000 43429 2651 38898 362591;362592;362593;362594;362595;362596;362597;362598;362599;362600;362601 286378;286379;286380;286381;286382;286383;286384;286385;286386;286387;286388;286389;286390;286391 286387 14 RATVVESSEK Unmodified 1104.5775 0.57750184 1869 P61981 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.05 3.87 1 5 1 12 4 2 1 1 1 1 1 1 1 1 1 1 1 1 1 12.58 11.905 2 2.3282E-10 7128 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 191.4 113.48 6814000000 4096800000 703230000 1808500000 10568000 7159900 12775000 10991000 9809800 8604700 10563000 33002000 19560000 9570700 20326000 52611000 43430 1869 38899 362602;362603;362604;362605;362606;362607;362608;362609;362610;362611;362612;362613;362614;362615;362616;362617;362618;362619;362620 286392;286393;286394;286395;286396;286397;286398;286399;286400;286401;286402;286403;286404;286405;286406;286407;286408;286409;286410;286411;286412 286407 20 RAVAGDASESALLK Unmodified 1386.7467 0.74669243 792 P05023 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 45.155 39.555 3 0.0015921 54460 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.409 51.084 26612000 15793000 0 10820000 0 0 0 0 0 0 0 0 0 0 0 0 43431 792 38900 362621;362622 286413;286414;286415;286416;286417 286414 5 RAVALDEAISQSTQFHDK Unmodified 2015.0072 0.007217228 2086 Q03001 DST Dystonin yes yes 0 0 1 By MS/MS 2 0 1 1 72.373 64.135 3 0.0024192 85183 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.959 22.309 9022300 9022300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43432 2086 38901 362623 286418 286418 1 RAVASQPDSVDAAER Unmodified 1570.7699 0.76994707 4666 Q9NVE7 PANK4 Pantothenate kinase 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 22.288 22.135 2 0.0014338 23284 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 85.288 52.342 38616000 0 0 0 9761700 9578100 19276000 0 0 0 0 0 0 0 0 0 43433 4666 38902 362624;362625;362626 286419;286420;286421 286421 3 RAVASQPDSVDAAERAEK Unmodified 1898.9446 0.94461697 4666 Q9NVE7 PANK4 Pantothenate kinase 4 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.77 2.89 4 22 2 2 2 2 2 2 2 2 2 2 2 1 1 2 25.875 25.357 3;4 3.0406E-33 27190 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 106.75 100.93 1356400000 73739000 0 28523000 209170000 456270000 428820000 24464000 28499000 31947000 15235000 13533000 19908000 5078100 2715100 18545000 43434 4666 38903 362627;362628;362629;362630;362631;362632;362633;362634;362635;362636;362637;362638;362639;362640;362641;362642;362643;362644;362645;362646;362647;362648;362649;362650;362651;362652 286422;286423;286424;286425;286426;286427;286428;286429;286430;286431;286432;286433;286434;286435;286436;286437;286438;286439;286440;286441;286442;286443;286444;286445 286444 20 RAVDFQEAQSYADDNSLLFMETSAK Unmodified 2835.3021 0.3021382 1104 P20339 RAB5A Ras-related protein Rab-5A yes yes 0 0 1 By MS/MS 2 0 1 1 91.76 83.63 3 7.9405E-06 108523 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.895 38.101 6929800 6929800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43435 1104 38904 362653 286446 286446 1 RAVDLIQK Unmodified 941.56581 0.56581494 1405 P39748 FEN1 Flap endonuclease 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28.054 27.432 2 0.0063493 29131 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 133.6 57.565 2275600000 1253700000 32996000 0 52120000 35812000 125720000 77717000 80684000 43141000 117440000 100350000 102320000 81385000 75636000 96501000 43436 1405 38905 362654;362655;362656;362657;362658;362659;362660;362661;362662;362663;362664;362665;362666;362667 286447;286448;286449;286450;286451;286452;286453 286453 1 RAVEFQEAQAYADDNSLLFMETSAK Unmodified 2833.3229 0.32287364 1646 P51148 RAB5C Ras-related protein Rab-5C yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 89.318 83.468 3 2.4623E-66 106862 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 130.23 117.43 30032000 30032000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43437 1646 38906 362668;362669 286454;286455 286455 2 RAVEFQEAQAYADDNSLLFMETSAK Oxidation (M) 2849.3178 0.31778826 1646 P51148 RAB5C Ras-related protein Rab-5C yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 83.922 77.505 3 1.7699E-31 101384 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 105.84 102.42 41518000 14190000 27328000 0 0 0 0 0 0 0 0 0 0 0 0 0 43438 1646 38906 362670;362671 286456 286456 2655 1 RAVERLEVEK Unmodified 1227.6935 0.69353465 2033 Q00341 HDLBP Vigilin yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 20.026 20.323 3 0.024819 19446 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.417 48.456 514420000 0 0 0 0 0 65110000 47077000 0 40903000 60832000 46327000 86150000 37956000 47414000 82654000 43439 2033 38907 362672;362673;362674;362675;362676;362677;362678;362679;362680 286457 286457 0 RAVQSGHVNLK Unmodified 1207.6786 0.67855329 2547 Q15545 TAF7 Transcription initiation factor TFIID subunit 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 11.289 11.431 3 0.0016807 9274 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.57 48.002 42931000 0 0 0 2183400 0 2777700 2755600 3240600 2982200 4591100 0 6448700 5704400 4024400 8223100 43440 2547 38908 362681;362682;362683;362684;362685;362686;362687;362688;362689;362690 286458;286459;286460;286461 286459 4 RAVSPSNPK Unmodified 954.52468 0.52467841 2398 Q14244 MAP7 Ensconsin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 5.9703 6.0877 2 0.040794 3856 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 85.064 36.56 36833000 0 0 0 2333100 3226000 3161800 4744700 3743300 3317100 2345600 3922100 3314800 2358000 1283000 3083500 43441 2398 38909 362691;362692;362693;362694;362695;362696;362697;362698;362699;362700;362701;362702 286462 286462 1 RAVSQIVTVYDK Unmodified 1377.7616 0.76161421 2816 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 47.921 48.143 2 0.012371 52942 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.64 52.865 62286000 0 0 0 0 2211400 6943300 4086200 5396300 5180000 6665800 9623900 8640600 0 4444200 9093900 43442 2816 38910 362703;362704;362705;362706;362707;362708;362709;362710;362711;362712 286463;286464;286465;286466;286467 286464 5 RCATPVIIDEILPSK Unmodified 1710.9338 0.93384128 5009 Q9ULW0 TPX2 Targeting protein for Xklp2 yes yes 0 0 1 By MS/MS 2 0 1 1 89.219 81.089 3 0.003949 105417 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.559 43.261 11657000 11657000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43443 5009 38911 362713 286468 286468 1 RCEFVMEVTNK Oxidation (M) 1427.6537 0.65372002 2638 Q16851 UGP2 UTP--glucose-1-phosphate uridylyltransferase yes yes 0 1 1 By MS/MS By matching 2 0 2 1 1 43.397 38.13 3 0.0072687 52498 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.275 44.243 133120000 126660000 0 6461000 0 0 0 0 0 0 0 0 0 0 0 0 43444 2638 38912 362714;362715 286469;286470 286470 4292 2 RCEFVMEVTNK Unmodified 1411.6588 0.6588054 2638 Q16851 UGP2 UTP--glucose-1-phosphate uridylyltransferase yes yes 0 0 1 By MS/MS 2 0 1 1 60.391 52.149 3 0.0068284 70621 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.098 51.4 25545000 25545000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43445 2638 38912 362716 286471;286472 286471 2 RCLEDSEDFGVK Unmodified 1453.6507 0.65074314 4730 Q9NXR5 ANKRD10 Ankyrin repeat domain-containing protein 10 yes yes 0 0 1 By MS/MS 2 0 1 1 45.558 41.743 3 0.0021024 52699 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 70.089 61.039 4661700 0 0 4661700 0 0 0 0 0 0 0 0 0 0 0 0 43446 4730 38913 362717 286473;286474 286474 2 RCLTQNDLK Unmodified 1146.5815 0.58154136 455 O75116 ROCK2 Rho-associated protein kinase 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 18.6 17.847 2 0.025806 26481 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.598 55.87 121290000 92865000 0 4952700 0 0 3886800 0 0 0 3978400 3549400 0 3107300 3347400 5601300 43447 455 38914 362718;362719;362720;362721;362722;362723;362724;362725 286475;286476 286476 2 RCLYASVLTAQPR Unmodified 1533.8086 0.80858118 980 P13639 EEF2 Elongation factor 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 59.993 60.161 3 1.571E-07 67593 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.204 78.065 102660000 0 0 0 4240800 0 3603000 0 3507600 4169200 3655000 9720500 23958000 5564200 9834400 34408000 43448 980 38915 362726;362727;362728;362729;362730;362731;362732;362733;362734;362735 286477;286478;286479;286480;286481;286482;286483;286484;286485 286478 8 RCQEAQNGSESEVWTHQSK Unmodified 2259.9927 0.99270615 5131 Q9Y2Z0 SUGT1 Suppressor of G2 allele of SKP1 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 4 12 2 2 2 1 1 1 2 1 2 2 25.724 24.848 3;4 4.6001E-25 24963 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 104.03 100.53 418080000 315780000 0 20476000 0 0 8891700 3837200 5177500 0 3317900 10751000 0 4752100 10882000 34216000 43449 5131 38916 362736;362737;362738;362739;362740;362741;362742;362743;362744;362745;362746;362747;362748;362749;362750;362751 286486;286487;286488;286489;286490;286491;286492;286493;286494;286495;286496;286497;286498;286499 286489 12 RCQLPDGSFR Unmodified 1234.5877 0.58768937 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.61 35.792 3 0.012019 38689 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 31.758 14.537 86729000 0 0 0 5087500 5102100 6528500 3880200 4424400 5790700 5982500 6112700 12867000 8742000 7795300 14417000 43450 528 38917 362752;362753;362754;362755;362756;362757;362758;362759;362760;362761;362762;362763 286500;286501;286502 286502 3 RCQQQMAEDK Unmodified 1292.5602 0.56015399 5288 Q9Y6K9 IKBKG NF-kappa-B essential modulator yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 6.3079 3.483 2 0.0033336 6286 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 134.05 111.41 23503000 16144000 0 7358800 0 0 0 0 0 0 0 0 0 0 0 0 43451 5288 38918 362764;362765 286503;286504 286503 2 RCQYVTEK Unmodified 1082.5179 0.51787847 771;897 P04075;P09972 ALDOA;ALDOC Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase C no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 6.83 3.76 3 2 7 2 2 1 1 1 1 1 1 1 1 9.6272 8.3158 2 0.00070035 10927 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 160.63 81.162 5097300000 4159300000 507110000 333820000 10943000 1348300 0 0 1093800 0 0 22301000 22815000 0 8766400 29793000 43452 771;897 38919 362766;362767;362768;362769;362770;362771;362772;362773;362774;362775;362776;362777 286505;286506;286507;286508;286509;286510;286511;286512;286513;286514;286515 286514 8 RCSDNTEVEVSNLENK Unmodified 1892.8534 0.8534187 4577 Q9NQW6 ANLN Actin-binding protein anillin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.399 39.528 3 0.00017146 43933 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 41.107 33.596 66452000 0 0 0 6697500 7977300 7767500 4630700 5807700 0 6655000 6474500 9213800 6068700 5159000 0 43453 4577 38920 362778;362779;362780;362781;362782;362783;362784;362785;362786;362787;362788;362789 286516;286517;286518;286519;286520;286521;286522;286523;286524;286525;286526;286527;286528 286517 13 RCTAEQTLQSDFLK Unmodified 1695.825 0.82501911 4752 Q9NYV4 CDK12 Cyclin-dependent kinase 12 yes yes 0 0 1 By MS/MS 2 0 1 1 74.321 66.191 2 2.919E-43 87572 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 176.51 141.09 17746000 17746000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43454 4752 38921 362790 286529 286529 1 RCVMDDDNEVRDR Unmodified 1678.7152 0.71515108 5267 Q9Y678 COPG1 Coatomer subunit gamma-1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.005 20.206 3 0.014836 20785 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 58.32 45.183 99312000 0 0 0 4924500 2508200 10782000 4299400 3147400 6088700 8217200 8601800 18179000 9017700 5369300 18177000 43455 5267 38922 362791;362792;362793;362794;362795;362796;362797;362798;362799;362800;362801;362802 286530;286531 286530 1 RCYLLVHQAK Unmodified 1286.6918 0.69176051 2168 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 29.396 29.698 3 0.0036271 32457 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 54.539 46.315 60580000 0 0 0 0 0 6631400 0 0 6705900 3871100 5179500 21836000 6987500 9369100 0 43456 2168 38923 362803;362804;362805;362806;362807;362808;362809 286532;286533;286534;286535 286532 4 RDAALAVAEAMADK Unmodified 1430.7188 0.71876312 1495 P46060 RANGAP1 Ran GTPase-activating protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.96 2.69 3 20 2 1 1 1 2 1 2 2 2 2 2 1 2 2 69.504 68.707 2;3 1.4163E-17 91512 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 121.56 93.546 534450000 325700000 51959000 0 3595000 3862000 13477000 4576400 10248000 10686000 13257000 14444000 21099000 11585000 13390000 36574000 43457 1495 38924 362810;362811;362812;362813;362814;362815;362816;362817;362818;362819;362820;362821;362822;362823;362824;362825;362826;362827;362828;362829;362830;362831;362832 286536;286537;286538;286539;286540;286541;286542;286543;286544;286545;286546;286547;286548;286549;286550;286551;286552;286553;286554;286555;286556;286557 286547 18 RDAALAVAEAMADK Oxidation (M) 1446.7137 0.71367774 1495 P46060 RANGAP1 Ran GTPase-activating protein 1 yes yes 0 1 1 By matching By MS/MS 2 0 2 1 1 47.645 41.825 3 0.0061214 52553 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 42.242 34.9 172570000 157520000 0 15045000 0 0 0 0 0 0 0 0 0 0 0 0 43458 1495 38924 362833;362834 286558 286558 2352 1 RDAEDAMDAMDGAVLDGR 2 Oxidation (M) 1938.8048 0.80475395 2050 Q01130 SRSF2 Serine/arginine-rich splicing factor 2 yes yes 0 2 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 2 2 1 3 2 1 1 1 2 3 36.351 36.608 3 5.5576E-06 40327 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 66.606 56.41 183790000 0 0 0 0 7147100 22300000 17831000 6410500 24872000 15950000 10127000 17047000 17032000 14056000 31017000 43459 2050 38925 362835;362836;362837;362838;362839;362840;362841;362842;362843;362844;362845;362846;362847;362848;362849;362850;362851;362852;362853 286559;286560;286561;286562;286563;286564;286565;286566;286567;286568;286569;286570;286571 286561 3332;3333 11 RDAEDAMDAMDGAVLDGR Oxidation (M) 1922.8098 0.80983933 2050 Q01130 SRSF2 Serine/arginine-rich splicing factor 2 yes yes 0 1 1 By MS/MS By matching By MS/MS 10 0 3 1 1 1 55.851 56.135 3 5.3651E-05 62992 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.585 54.376 19688000 0 0 0 0 0 3859100 0 3022500 0 0 0 0 0 0 12807000 43460 2050 38925 362854;362855;362856 286572;286573 286573 3332;3333 2 RDAEDAMDAMDGAVLDGR Unmodified 1906.8149 0.81492471 2050 Q01130 SRSF2 Serine/arginine-rich splicing factor 2 yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 72.122 72.291 3 1.6403E-26 82293 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.808 79.371 33002000 0 0 0 0 0 4799800 0 0 3025400 4327900 5395800 0 2677900 0 12775000 43461 2050 38925 362857;362858;362859;362860;362861;362862;362863;362864 286574;286575;286576;286577;286578 286575 5 RDAEDDGEEEDD Unmodified 1393.4753 0.47534077 4149 Q9BTT0 ANP32E Acidic leucine-rich nuclear phosphoprotein 32 family member E yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.87 3.56 1 2 1 11 2 2 1 1 1 1 1 1 1 1 1 1 1 13.081 12.854 2 9.3448E-31 91946 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 191.4 191.4 229930000 168540000 34935000 0 756400 1361100 3177900 2039700 1897700 3721100 784490 3122600 0 2245900 1841300 5501700 43462 4149 38926 362865;362866;362867;362868;362869;362870;362871;362872;362873;362874;362875;362876;362877;362878;362879 286579;286580;286581;286582;286583;286584;286585;286586;286587 286584 8 RDAELIQAGHMDSR Unmodified 1597.7631 0.76308755 4326 Q9H0E9 BRD8 Bromodomain-containing protein 8 yes yes 0 0 1 By MS/MS 10 0 1 1 32.462 33.178 3 0.02404 35233 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 26.89 13.486 10676000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10676000 43463 4326 38927 362880 286588 286588 1 RDAFTDSAISAK Unmodified 1280.6361 0.63607935 4047 Q99700 ATXN2 Ataxin-2 yes yes 0 0 1 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 2 18 1 1 2 1 2 1 2 1 1 1 2 1 2 2 35.516 35.269 2;3 0.007373 44916 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 59.227 29.022 168010000 0 7673600 10821000 11360000 3309500 16351000 7543400 10749000 6426700 8888800 10820000 17758000 12447000 15227000 28631000 43464 4047 38928 362881;362882;362883;362884;362885;362886;362887;362888;362889;362890;362891;362892;362893;362894;362895;362896;362897;362898;362899;362900 286589;286590;286591;286592;286593;286594 286594 4 RDAMELPDYVLLTATAK Oxidation (M) 1921.9819 0.98191368 3180 Q86W92 PPFIBP1 Liprin-beta-1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 82.383 82.48 3 0.00011774 95401 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 58.073 54.469 52383000 0 0 0 0 2755200 0 0 6968400 0 0 10327000 7897200 0 0 24435000 43465 3180 38929 362901;362902;362903;362904;362905 286595;286596;286597;286598 286596 4796 4 RDCNDTLEEENTNLETPTK Unmodified 2278.0019 0.0019334331 4262 Q9BZE2 PUS3 tRNA pseudouridine(38/39) synthase yes yes 0 0 1 By MS/MS 2 0 1 1 48.99 41.165 3 0.015623 57123 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 38.915 24.9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43466 4262 38930 362906 286599 286599 1 RDDGYEAAASSK Unmodified 1268.5633 0.56330834 312 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 10.338 10.479 2 0.00019518 8188 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 91.855 59.92 49162000 0 0 0 3379700 2278700 3210200 3602300 2842900 3276500 4081100 5175400 5149100 5490300 4530100 6145600 43467 312 38931 362907;362908;362909;362910;362911;362912;362913;362914;362915;362916;362917;362918 286600;286601;286602;286603;286604;286605;286606;286607;286608 286606 9 RDDSNESDVVESLDEIYHTGTFAQIHEMQDLGDK Unmodified 3892.7334 0.73336973 1379 P36776 LONP1 Lon protease homolog, mitochondrial yes yes 0 0 1 By MS/MS 2 0 1 1 95.979 87.848 4 2.4785E-215 113565 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 180.77 175.92 30918000 30918000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43468 1379 38932 362919 286609 286609 1 RDEALPSLTQVR Unmodified 1383.747 0.74702678 1238 P28715 ERCC5 DNA repair protein complementing XP-G cells yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 55.915 55.935 3 0.008635 63153 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 37.793 25.878 19742000 0 0 0 0 2937100 0 5378800 4058000 3036500 0 0 0 0 4331300 0 43469 1238 38933 362920;362921;362922;362923;362924 286610;286611;286612;286613;286614 286611 4 RDEEEEEASGLK Unmodified 1390.6212 0.62121715 2895 Q6N069 NAA16 N-alpha-acetyltransferase 16, NatA auxiliary subunit yes yes 0 0 1 By matching By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 16.429 16.732 3 0.0054665 15796 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 30.874 23.672 13669000 0 0 0 0 0 0 0 936160 1449200 2622200 3416100 5245700 0 0 0 43470 2895 38934 362925;362926;362927;362928;362929 286615;286616 286615 2 RDEEPESIEGK Unmodified 1287.5943 0.59427411 240 O15014 ZNF609 Zinc finger protein 609 yes yes 0 0 1 By MS/MS 2 0 1 1 20.577 15.853 2 0.013554 22999 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.342 47.548 4187500 4187500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43471 240 38935 362930 286617 286617 1 RDEFEFLEK Unmodified 1211.5823 0.58225287 2401 Q14258 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 73.288 66.36 2 0.0058485 87463 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 117.52 82.164 149590000 123970000 25615000 0 0 0 0 0 0 0 0 0 0 0 0 0 43472 2401 38936 362931;362932 286618 286618 0 RDEGGPSGGPAVGAPPPGDEASSVGAGQPAASSNLQPQPK Unmodified 3693.7619 0.76190816 124 O00178 GTPBP1 GTP-binding protein 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 2 1 1 2 2 1 59.448 59.589 3;4 3.8492E-07 67489 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 27.923 18.78 51656000 0 0 0 0 5943600 0 4818500 0 0 6621800 0 14838000 12630000 0 6803800 43473 124 38937 362933;362934;362935;362936;362937;362938;362939;362940;362941 286619;286620;286621;286622;286623;286624 286620 6 RDELTLEGIK Unmodified 1172.6401 0.6401021 1400 P38919 EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.67 3.87 1 5 3 12 4 3 2 1 1 1 1 1 1 1 1 1 1 1 1 58.105 56.297 2;3 2.6042E-22 59190 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 173.32 93.418 1531100000 98859000 289710000 273630000 27581000 25858000 85122000 56414000 60649000 51404000 109140000 102810000 91267000 59876000 74121000 124690000 43474 1400 38938 362942;362943;362944;362945;362946;362947;362948;362949;362950;362951;362952;362953;362954;362955;362956;362957;362958;362959;362960;362961;362962 286625;286626;286627;286628;286629;286630;286631;286632;286633;286634;286635;286636;286637;286638;286639;286640;286641;286642;286643;286644 286636 16 RDENESPFPDIPK Unmodified 1542.7314 0.7314363 4969 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 yes yes 0 0 1 By MS/MS 2 0 1 1 70.087 61.801 3 0.015416 82515 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 41.092 27.186 7151200 7151200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43475 4969 38939 362963 286645 286645 1 RDEPTGEVLSLVGK Unmodified 1498.7991 0.79912193 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 71.692 71.861 3 0.0011859 82011 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 31.905 19.545 30873000 0 0 0 0 0 2900400 1642900 2665400 2477700 3640500 2735100 0 2364700 4400900 8045300 43476 528 38940 362964;362965;362966;362967;362968;362969;362970;362971;362972 286646;286647;286648;286649;286650;286651 286646 6 RDETALQEEEELQLALALSQSEAEEK Unmodified 2958.4306 0.43056942 230 O14964 HGS Hepatocyte growth factor-regulated tyrosine kinase substrate yes yes 0 0 1 By MS/MS By MS/MS 2.67 0.471 1 2 2 1 94.585 89.627 3 8.521E-68 113174 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 133.15 129.96 55950000 53837000 2113200 0 0 0 0 0 0 0 0 0 0 0 0 0 43477 230 38941 362973;362974;362975 286652;286653;286654;286655 286654 4 RDFFLANASR Unmodified 1195.6098 0.60980502 841 P07384 CAPN1 Calpain-1 catalytic subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 1 2 1 2 2 2 2 2 2 1 2 51.165 51.39 2;3 0.010946 57119 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 107.45 84.384 669310000 0 0 0 30250000 14525000 61747000 29104000 41318000 49598000 39761000 66423000 96883000 42501000 33261000 163940000 43478 841 38942 362976;362977;362978;362979;362980;362981;362982;362983;362984;362985;362986;362987;362988;362989;362990;362991;362992;362993;362994;362995 286656;286657;286658;286659;286660;286661;286662 286661 4 RDFGSFDK Unmodified 970.45084 0.45084476 776 P04179 SOD2 Superoxide dismutase [Mn], mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 33.552 28.81 2 0.037648 40240 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 112.11 26.748 73508000 58234000 11415000 3859200 0 0 0 0 0 0 0 0 0 0 0 0 43479 776 38943 362996;362997;362998 286663 286663 1 RDFIATLEAEAFDDVVGETVGK Unmodified 2381.1751 0.17507042 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.12 0.599 1 5 2 5 2 1 101.44 97.289 2;3 5.449E-64 119721 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 145.91 135.1 413040000 383230000 28300000 1516200 0 0 0 0 0 0 0 0 0 0 0 0 43480 1226 38944 362999;363000;363001;363002;363003;363004;363005;363006 286664;286665;286666;286667;286668;286669;286670;286671;286672;286673 286672 9 RDFTEVLSPNMYNSK Unmodified 1799.8512 0.85123386 12 A2RTX5 TARSL2 Probable threonine--tRNA ligase 2, cytoplasmic yes yes 0 0 1 By MS/MS 2 0 1 1 77.356 69.226 3 0.014926 91116 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 31.614 24.082 8501300 8501300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43481 12 38945 363007 286674 286674 1 RDFVDHIDLVDPVDGVVLVDPEYLK Unmodified 2866.4753 0.47527518 1571 P49407 ARRB1 Beta-arrestin-1 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 97.726 91.905 4 8.9891E-31 116268 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 105.32 98.888 52945000 52945000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43482 1571 38946 363008;363009 286675;286676;286677 286677 3 RDGDLGLGPISDSK Unmodified 1428.7209 0.72087161 1983 P78415 IRX3 Iroquois-class homeodomain protein IRX-3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 51.531 51.51 3 0.0040929 58346 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 38.376 28.839 45147000 0 0 0 5037700 4921600 10208000 6450600 0 0 0 0 0 0 7965600 10563000 43483 1983 38947 363010;363011;363012;363013;363014;363015 286678;286679;286680;286681;286682 286679 5 RDGSDVIYPAR Unmodified 1247.6258 0.62584901 1191 P25685 DNAJB1 DnaJ homolog subfamily B member 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 2 2 2 2 1 2 2 2 2 2 2 30.283 30.498 2;3 0.0015261 32663 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 107.79 81.745 297210000 0 0 0 6334500 6588500 12726000 14647000 14494000 6491800 26062000 27068000 36880000 26029000 29707000 90180000 43484 1191 38948 363016;363017;363018;363019;363020;363021;363022;363023;363024;363025;363026;363027;363028;363029;363030;363031;363032;363033;363034;363035;363036;363037 286683;286684;286685;286686;286687;286688;286689;286690;286691;286692 286688 8 RDGSLHVTCTDQETGK Unmodified 1802.8217 0.82172464 2175 Q0VDF9 HSPA14 Heat shock 70 kDa protein 14 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 6 2 2 2 22.504 18.569 3;4 5.9306E-05 23449 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 73.498 67.857 356070000 287870000 14174000 54036000 0 0 0 0 0 0 0 0 0 0 0 0 43485 2175 38949 363038;363039;363040;363041;363042;363043 286693;286694 286694 1 RDGSNIIYTAK Unmodified 1236.6463 0.64625011 4868 Q9UDY4 DNAJB4 DnaJ homolog subfamily B member 4 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 2 1 1 1 2 2 30.414 29.118 2;3 0.0036664 41510 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 92.428 41.955 526100000 467290000 0 0 0 0 0 0 0 5503300 0 0 0 5700500 16880000 30730000 43486 4868 38950 363044;363045;363046;363047;363048;363049;363050;363051;363052 286695;286696;286697;286698;286699;286700;286701 286698 7 RDHALLEEQSK Unmodified 1324.6735 0.67352749 356 O43707 ACTN4 Alpha-actinin-4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.1 3.82 1 8 2 19 6 4 1 1 1 2 2 1 2 2 2 2 2 2 20.292 19.225 2;3 1.9008E-27 14305 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 176.78 134.44 2583100000 1504200000 137770000 42358000 16401000 6329200 35271000 17938000 0 13531000 38328000 139560000 144600000 50119000 117440000 319300000 43487 356 38951 363053;363054;363055;363056;363057;363058;363059;363060;363061;363062;363063;363064;363065;363066;363067;363068;363069;363070;363071;363072;363073;363074;363075;363076;363077;363078;363079;363080;363081;363082 286702;286703;286704;286705;286706;286707;286708;286709;286710;286711;286712;286713;286714;286715;286716;286717;286718;286719;286720;286721;286722;286723;286724;286725;286726;286727;286728;286729;286730 286728 24 RDHRPPCAQEAPR Unmodified 1588.7641 0.76409061 2303 Q13501 SQSTM1 Sequestosome-1 yes yes 0 0 2 By matching By MS/MS By MS/MS 10 0 3 1 1 1 10.64 10.933 4 0.0029755 8592 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.457 32.096 36521000 0 0 0 0 0 0 0 0 0 0 0 13194000 5143600 0 18184000 43488 2303 38952 363083;363084;363085 286731 286731 1 RDIDNLVQR Unmodified 1127.6047 0.60471964 1563 P49257 LMAN1 Protein ERGIC-53 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.403 34.586 2 0.015239 38259 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 107.21 47.96 322430000 0 0 0 14592000 12240000 31546000 17419000 20731000 20138000 27145000 56083000 30919000 28223000 25688000 37709000 43489 1563 38953 363086;363087;363088;363089;363090;363091;363092;363093;363094;363095;363096;363097 286732;286733;286734;286735;286736;286737;286738;286739;286740 286738 6 RDIEDPEIVVQATVL Unmodified 1695.9043 0.90431529 181 O00764 PDXK Pyridoxal kinase yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 89.237 85.72 2 0.00045126 104022 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 38.634 22.38 98478000 0 89680000 8797900 0 0 0 0 0 0 0 0 0 0 0 0 43490 181 38954 363098;363099;363100 286741;286742;286743 286743 1 RDILSFDK Unmodified 992.5291 0.52909508 2377 Q14151 SAFB2 Scaffold attachment factor B2 yes yes 0 0 1 By MS/MS 2 0 1 1 60.078 51.852 2 0.012456 70437 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 135.86 53.973 32754000 32754000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43491 2377 38955 363101 286744 286744 0 RDIMSIYK Oxidation (M) 1040.5325 0.5324659 4443 Q9H832 UBE2Z Ubiquitin-conjugating enzyme E2 Z yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 34.854 29.986 2 0.028423 41948 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.787 40.684 40160000 37492000 0 2667900 0 0 0 0 0 0 0 0 0 0 0 0 43492 4443 38956 363102;363103 286745 286745 0 RDIPWPEGEEK Unmodified 1354.6517 0.65172941 3859 Q96GX5 MASTL Serine/threonine-protein kinase greatwall yes yes 0 0 1 By MS/MS 2 0 1 1 52.559 48.639 3 0.043693 61050 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 29.303 18.09 7959400 0 0 7959400 0 0 0 0 0 0 0 0 0 0 0 0 43493 3859 38957 363104 286746 286746 1 RDIQENDEEAVQVK Unmodified 1671.8064 0.80639216 129 O00231 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.89 2.72 3 1 24 1 2 1 2 2 2 2 2 2 2 2 2 2 2 2 30.207 29.701 2;3 1.1937E-117 32179 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 175.15 163.89 1608900000 90043000 197250000 13335000 73255000 80895000 100540000 42338000 39814000 32811000 182960000 222160000 261630000 63123000 67926000 140860000 43494 129 38958 363105;363106;363107;363108;363109;363110;363111;363112;363113;363114;363115;363116;363117;363118;363119;363120;363121;363122;363123;363124;363125;363126;363127;363128;363129;363130;363131;363132 286747;286748;286749;286750;286751;286752;286753;286754;286755;286756;286757;286758;286759;286760;286761;286762;286763;286764;286765 286755 17 RDLGEELEALK Unmodified 1271.6721 0.67213051 1356;1366 P35579;P35749 MYH9;MYH11 Myosin-9;Myosin-11 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.83 3.47 9 4 33 5 6 2 2 3 4 2 2 3 2 3 2 3 3 4 67.943 66.624 2;3 9.9625E-19 75810 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 155 96.021 2923300000 263170000 505650000 70713000 69740000 55437000 202040000 70375000 121460000 160760000 156540000 332600000 237760000 148930000 129920000 398150000 43495 1356;1366 38959 363133;363134;363135;363136;363137;363138;363139;363140;363141;363142;363143;363144;363145;363146;363147;363148;363149;363150;363151;363152;363153;363154;363155;363156;363157;363158;363159;363160;363161;363162;363163;363164;363165;363166;363167;363168;363169;363170;363171;363172;363173;363174;363175;363176;363177;363178 286766;286767;286768;286769;286770;286771;286772;286773;286774;286775;286776;286777;286778;286779;286780;286781;286782;286783;286784;286785;286786;286787;286788;286789;286790;286791;286792;286793;286794;286795;286796;286797;286798;286799;286800;286801;286802;286803 286791 19 RDLMACAQTGSGK Unmodified 1393.6442 0.64421797 170 O00571;O15523 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 4 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 24.305 23.373 2;3 5.4523E-20 33586 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 161.48 129.98 301020000 135320000 0 18195000 7985000 8577100 12105000 7458600 9295900 5198700 11838000 14157000 26097000 13004000 13323000 18456000 43496 170 38960 363179;363180;363181;363182;363183;363184;363185;363186;363187;363188;363189;363190;363191;363192;363193;363194 286804;286805;286806;286807;286808;286809;286810;286811;286812;286813;286814;286815;286816;286817;286818;286819 286810 15 RDLNPEDFWEIIGELGDGAFGK Unmodified 2477.1863 0.18630381 4365 Q9H2G2 SLK STE20-like serine/threonine-protein kinase yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 102.8 97.317 3 6.2333E-26 122037 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 108.96 100.57 37158000 31828000 5330500 0 0 0 0 0 0 0 0 0 0 0 0 0 43497 4365 38961 363195;363196;363197 286820;286821;286822 286822 3 RDLPGALDEK Unmodified 1112.5826 0.58258722 3759 Q96BM9 ARL8A ADP-ribosylation factor-like protein 8A yes yes 0 0 1 By MS/MS 2 0 1 1 36.517 33.133 2 0.0124 41874 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 94.692 40.724 7475300 0 0 7475300 0 0 0 0 0 0 0 0 0 0 0 0 43498 3759 38962 363198 286823;286824 286824 2 RDLTQMADELR Unmodified 1346.6612 0.66124824 1435 P41227 NAA10 N-alpha-acetyltransferase 10 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 59.056 59.335 3 0.0063913 67597 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 56.951 43.551 47145000 0 0 0 0 0 0 0 8366200 3797700 6871100 13469000 14641000 0 0 0 43499 1435 38963 363199;363200;363201;363202;363203 286825;286826 286826 1 RDLTQMADELRR Oxidation (M) 1518.7573 0.75727389 1435 P41227 NAA10 N-alpha-acetyltransferase 10 yes yes 0 1 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 28 2 2 3 1 2 3 4 4 3 2 2 33.053 33.262 3;4 0.0026239 36417 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 68.515 58.716 7241500000 0 0 0 38021000 39280000 93132000 354910000 335180000 418700000 1230800000 1907000000 2770800000 24624000 0 29100000 43500 1435 38964 363204;363205;363206;363207;363208;363209;363210;363211;363212;363213;363214;363215;363216;363217;363218;363219;363220;363221;363222;363223;363224;363225;363226;363227;363228;363229;363230;363231 286827;286828;286829;286830;286831;286832;286833;286834;286835;286836;286837;286838;286839;286840;286841;286842 286833 2251 4 RDLTQMADELRR Unmodified 1502.7624 0.76235927 1435 P41227 NAA10 N-alpha-acetyltransferase 10 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 54.117 54.36 3 1.0948E-09 61169 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 145.71 114.48 745250000 0 0 0 0 0 15646000 17451000 80692000 135620000 59008000 94321000 342500000 0 0 0 43501 1435 38964 363232;363233;363234;363235;363236;363237;363238 286843;286844;286845;286846;286847;286848;286849;286850;286851;286852 286846 9 RDMGFTEEEFK Oxidation (M) 1403.6027 0.60273031 736 P00813 ADA Adenosine deaminase yes yes 0 1 1 By MS/MS 2 0 1 1 44.437 40.666 3 0.0059604 51141 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 52.693 44.18 24868000 0 0 24868000 0 0 0 0 0 0 0 0 0 0 0 0 43502 736 38965 363239 286853 286853 896 1 RDMNEVETQFK Unmodified 1395.6453 0.64526383 4757 Q9NZ08 ERAP1 Endoplasmic reticulum aminopeptidase 1 yes yes 0 0 1 By MS/MS 2 0 1 1 41.165 37.555 3 0.019218 47379 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 44.564 31.163 4594100 0 0 4594100 0 0 0 0 0 0 0 0 0 0 0 0 43503 4757 38966 363240 286854 286854 1 RDMPPAFIK Oxidation (M) 1089.5641 0.56410038 1073 P18206 VCL Vinculin yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 44.028 38.699 2 0.01849 53184 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.639 35.785 146220000 139040000 0 7177700 0 0 0 0 0 0 0 0 0 0 0 0 43504 1073 38967 363241;363242 286855 286855 1539 0 RDNELIGQTVR Unmodified 1299.6895 0.6895119 136 O00267 SUPT5H Transcription elongation factor SPT5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 33.79 33.943 3 0.006868 36878 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 31.722 17.464 41476000 0 0 0 3636300 3154600 2864100 2701900 0 2654300 5630000 6718400 9496000 0 0 4620100 43505 136 38968 363243;363244;363245;363246;363247;363248;363249;363250;363251 286856;286857;286858;286859;286860 286859 5 RDNSDFDLLTVSETANEPPQDEGNSFNSPR Unmodified 3350.4923 0.49233482 278 O15371 EIF3D Eukaryotic translation initiation factor 3 subunit D yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 2 1 1 80.722 80.89 3 5.3929E-54 93099 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 97.639 95.436 27144000 0 0 0 0 0 0 0 0 0 0 4331600 7018900 0 2897700 12896000 43506 278 38969 363252;363253;363254;363255;363256 286861;286862;286863;286864 286861 4 RDNTNEIYSGK Unmodified 1295.6106 0.61059288 813 P05556 ITGB1 Integrin beta-1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching 10 0 7 1 1 1 1 1 1 1 14.931 15.227 2 0.0025713 14371 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 90.827 67.454 34802000 0 0 0 0 0 3049200 0 0 0 4386300 6644300 5973700 4909000 4982800 4856900 43507 813 38970 363257;363258;363259;363260;363261;363262;363263 286865;286866 286865 2 RDPALNSGVSQKPDPAK Unmodified 1778.9275 0.92751034 946 P11388 TOP2A DNA topoisomerase 2-alpha yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24.106 23.66 3 3.2689E-12 33676 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.261 81.481 118940000 59609000 0 6977900 3302200 2878600 2590800 3591700 2812000 2031000 2962200 5227700 8014200 4328700 6972600 7638100 43508 946 38971 363264;363265;363266;363267;363268;363269;363270;363271;363272;363273;363274;363275;363276;363277 286867;286868;286869;286870;286871;286872;286873;286874;286875;286876;286877 286871 11 RDPEDPSAVALK Unmodified 1296.6674 0.66737948 4840 Q9UBF8 PI4KB Phosphatidylinositol 4-kinase beta yes yes 0 0 1 By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 34.518 34.594 2;3 0.0034789 38258 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 46.069 32.26 35062000 0 0 0 1987800 2113800 9178600 0 3099200 3510300 3699900 5663400 0 3546000 2263600 0 43509 4840 38972 363278;363279;363280;363281;363282;363283;363284;363285;363286;363287 286878;286879 286878 2 RDPEVGKDELSK Unmodified 1371.6994 0.69940789 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 0 2 By MS/MS 2 0 1 1 20.945 18.142 3 0.02731 23146 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 65.895 42.219 27413000 0 0 27413000 0 0 0 0 0 0 0 0 0 0 0 0 43510 645 38973 363288 286880 286880 1 RDPGNTEPVK Unmodified 1111.5622 0.56218613 2654 Q2NL82 TSR1 Pre-rRNA-processing protein TSR1 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.2633 7.3869 2 0.014916 5491 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 88.37 59.643 91324000 0 0 0 7438100 3183300 4058200 3972900 4061100 2999800 7082900 17675000 14750000 6792800 4910600 14399000 43511 2654 38974 363289;363290;363291;363292;363293;363294;363295;363296;363297;363298;363299;363300 286881;286882;286883;286884 286882 4 RDPGVITYDLPTPPGEK Unmodified 1853.9523 0.95232811 1210 P26640 VARS Valine--tRNA ligase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 73.746 72.6 3 1.5668E-19 84078 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 103.88 98.338 1416200000 70298000 524430000 325060000 17478000 17663000 69078000 28412000 22347000 20990000 58108000 48505000 57329000 27445000 39124000 89945000 43512 1210 38975 363301;363302;363303;363304;363305;363306;363307;363308;363309;363310;363311;363312;363313;363314;363315;363316 286885;286886;286887;286888;286889;286890;286891;286892;286893;286894;286895;286896;286897;286898;286899;286900;286901;286902;286903;286904;286905;286906;286907 286903 22 RDPHLACVAYER Unmodified 1485.7147 0.7146808 2040;1723 P53675;Q00610 CLTCL1;CLTC Clathrin heavy chain 2;Clathrin heavy chain 1 no no 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 34.303 34.318 3 0.0064995 36604 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 31.827 19.851 18964000 0 0 0 4023800 0 0 3766100 0 1414600 0 0 0 0 9759700 0 43513 1723;2040 38976 363317;363318;363319;363320;363321;363322 286908;286909;286910;286911 286910 4 RDPIDPVSAGASAAK Unmodified 1453.7525 0.75250609 246 O15056 SYNJ2 Synaptojanin-2 yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 38.576 38.837 3 0.0059037 41964 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 25.167 13.634 34853000 0 0 0 3783900 0 0 1827500 3208400 2013200 2888000 4030700 3572000 4043200 3703900 5781800 43514 246 38977 363323;363324;363325;363326;363327;363328;363329;363330;363331;363332 286912 286912 1 RDPQELVASFSER Unmodified 1532.7583 0.75831975 4907 Q9UHR5 SAP30BP SAP30-binding protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.947 66.032 3 0.0057913 75492 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 26.21 16.922 96513000 0 0 0 4060000 2747300 5970300 4762500 7469500 6429500 8164900 11194000 12518000 7413700 7127500 18656000 43515 4907 38978 363333;363334;363335;363336;363337;363338;363339;363340;363341;363342;363343;363344 286913;286914;286915;286916;286917;286918;286919;286920;286921;286922 286919 9 RDPTAEQFQEELEK Unmodified 1718.8111 0.81114318 1310 P31944 CASP14 Caspase-14;Caspase-14 subunit p17, mature form;Caspase-14 subunit p10, mature form;Caspase-14 subunit p20, intermediate form;Caspase-14 subunit p8, intermediate form yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.94 1 1 26 2 3 2 2 2 2 2 2 2 3 2 2 2 56.827 56.5 2;3 9.2478E-21 63647 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 115.1 107.81 1259200000 0 11948000 0 468230000 62961000 70428000 60068000 90855000 34042000 56107000 99556000 96332000 79747000 55402000 73500000 43516 1310 38979 363345;363346;363347;363348;363349;363350;363351;363352;363353;363354;363355;363356;363357;363358;363359;363360;363361;363362;363363;363364;363365;363366;363367;363368;363369;363370;363371;363372 286923;286924;286925;286926;286927;286928;286929;286930;286931;286932;286933;286934;286935;286936;286937;286938;286939;286940;286941;286942;286943;286944;286945;286946;286947;286948;286949;286950;286951;286952;286953;286954 286935 31 RDQALTEEHAR Unmodified 1324.6484 0.64837537 971 P12814 ACTN1 Alpha-actinin-1 yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 7.8542 7.9643 3 3.8366E-09 5487 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 130.56 103.43 338470000 0 0 0 10728000 6784200 13682000 13060000 9610400 8567600 23546000 0 74840000 20846000 64072000 92729000 43517 971 38980 363373;363374;363375;363376;363377;363378;363379;363380;363381;363382;363383 286955;286956;286957;286958;286959;286960;286961;286962;286963 286957 4 RDQNYPGAIAIHHPNVAEK Unmodified 2129.0766 0.076634197 75 CON__P15636 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.55 1.82 2 39 7 803 22 11 15 61 55 68 67 60 63 73 80 68 70 71 67 74.339 74.369 2;3;4;5 1.3366E-289 48920 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 260.98 260.98 + 244200000000 507960000 202450000 44747000 5242200000 2621800000 28645000000 7392500000 10061000000 29972000000 20496000000 19618000000 36060000000 33433000000 17389000000 32515000000 43518 75 38981 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7678;287679;287680;287681;287682;287683;287684;287685;287686;287687;287688;287689;287690;287691;287692;287693;287694;287695;287696;287697;287698;287699;287700;287701;287702;287703;287704;287705;287706;287707;287708;287709;287710;287711;287712;287713;287714;287715;287716;287717;287718;287719;287720;287721;287722;287723;287724;287725;287726;287727;287728;287729;287730;287731;287732;287733;287734;287735;287736;287737;287738;287739;287740;287741;287742;287743;287744;287745;287746;287747;287748;287749;287750;287751;287752;287753;287754;287755;287756;287757;287758;287759;287760;287761;287762;287763;287764;287765;287766;287767;287768;287769;287770;287771;287772;287773;287774;287775;287776;287777;287778;287779;287780;287781;287782;287783;287784;287785;287786;287787;287788;287789;287790;287791;287792;287793;287794;287795;287796;287797;287798;287799;287800;287801;287802;287803;287804;287805;287806;287807;287808;287809;287810;287811;287812;287813;287814;287815;287816;287817;287818;287819;287820;287821;287822;287823;287824;287825;287826;287827;287828;287829;287830;287831;287832;287833;287834;287835;287836;287837;287838;287839;287840;287841;287842;287843;287844;287845;287846;287847;287848;287849;287850;287851;287852;287853;287854;287855;287856;287857;287858;287859;287860;287861;287862;287863;287864;287865;287866;287867;287868;287869;287870;287871;287872;287873;287874;287875;287876;287877;287878;287879;287880;287881;287882;287883;287884;287885;287886;287887;287888;287889;287890;287891;287892;287893;287894;287895;287896;287897;287898;287899;287900;287901;287902;287903;287904;287905;287906;287907;287908;287909;287910;287911;287912;287913;287914;287915;287916;287917;287918;287919;287920;287921;287922;287923;287924;287925;287926;287927;287928;287929;287930;287931;287932;287933;287934;287935;287936;287937;287938;287939;287940;287941;287942;287943;287944;287945;287946;287947;287948;287949;287950;287951;287952;287953;287954;287955;287956;287957;287958;287959;287960;287961;287962;287963;287964;287965;287966;287967;287968;287969;287970;287971;287972;287973;287974;287975;287976;287977;287978;287979;287980;287981;287982;287983;287984;287985;287986;287987;287988;287989;287990;287991;287992;287993;287994;287995;287996;287997;287998;287999;288000;288001;288002;288003;288004;288005;288006;288007;288008;288009;288010;288011;288012;288013;288014;288015;288016;288017;288018;288019;288020;288021;288022;288023;288024;288025;288026;288027;288028;288029;288030;288031;288032;288033;288034;288035;288036;288037;288038;288039;288040;288041;288042;288043;288044;288045;288046;288047;288048;288049;288050;288051;288052;288053;288054;288055;288056;288057;288058;288059;288060;288061;288062;288063;288064;288065;288066;288067;288068;288069;288070;288071 287653 1027 RDQNYPGAIAIHHPNVAEKR Unmodified 2285.1777 0.17774523 75 CON__P15636 yes yes 0 0 2 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 32 5 1 4 1 1 6 7 3 4 40.789 41.172 3;4;5 8.0339E-36 43301 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 105.38 90.124 + 954020000 0 0 0 0 0 35779000 0 6933500 36901000 5053100 8136500 282710000 174540000 58326000 345640000 43519 75 38982 364235;364236;364237;364238;364239;364240;364241;364242;364243;364244;364245;364246;364247;364248;364249;364250;364251;364252;364253;364254;364255;364256;364257;364258;364259;364260;364261;364262;364263;364264;364265;364266 288072;288073;288074;288075;288076;288077;288078;288079;288080;288081;288082;288083;288084;288085;288086;288087;288088;288089;288090;288091;288092;288093 288077 16 RDQPAFTPSGILTPHALGSR Unmodified 2120.1127 0.11268535 4323 Q9H0D6 XRN2 5'-3' exoribonuclease 2 yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 75.045 75.197 3 8.3945E-06 86277 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.356 56.758 19483000 0 0 0 0 0 3135400 0 0 0 0 0 0 0 0 16348000 43520 4323 38983 364267;364268 288094 288094 1 RDQPIILTSELGK Unmodified 1468.8249 0.82494275 4767 Q9NZH8 IL36G Interleukin-36 gamma yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 65.164 65.116 3 0.0025959 75513 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 55.841 51.039 33384000 0 0 0 17275000 0 4465600 0 0 0 4328700 0 0 3604000 3710900 0 43521 4767 38984 364269;364270;364271;364272;364273 288095;288096 288096 1 RDREEDEEDAYER Unmodified 1710.7081 0.70813467 1596 P49756 RBM25 RNA-binding protein 25 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 14.173 14.311 3 0.0036977 13059 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.81 60.752 47268000 0 0 0 1956300 1977600 2305000 1852300 1874400 2171700 5117800 6944600 0 7279500 6205100 9584000 43522 1596 38985 364274;364275;364276;364277;364278;364279;364280;364281;364282;364283;364284 288097;288098;288099;288100 288098 2 RDSDAGSSTPTTSTR Unmodified 1537.6968 0.69684171 1656 P51532 SMARCA4 Transcription activator BRG1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 7.025 7.1362 3 3.6654E-08 4998 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 79.652 64.107 65479000 0 0 0 0 4054100 16342000 0 4852800 10633000 12099000 17498000 0 0 0 0 43523 1656 38986 364285;364286;364287;364288;364289;364290 288101;288102;288103;288104;288105;288106 288102 6 RDSDIQQLQK Unmodified 1229.6364 0.6364137 4555 Q9NPJ6 MED4 Mediator of RNA polymerase II transcription subunit 4 yes yes 0 0 1 By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 19.286 19.536 2 0.029786 18837 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.649 66.345 58574000 0 0 0 0 0 5117700 5339700 0 3575800 9277800 7579000 0 7049300 6470300 14164000 43524 4555 38987 364291;364292;364293;364294;364295;364296;364297;364298 288107;288108;288109 288107 0 RDSFDNCSLGESSK Unmodified 1600.6787 0.6787488 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28.836 28.44 3 0.02301 35596 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 33.301 27.577 80817000 0 12331000 6237000 4019100 2755100 4262400 3497600 3474200 4296000 5175800 9220800 8057000 5166200 3893400 8430700 43525 2804 38988 364299;364300;364301;364302;364303;364304;364305;364306;364307;364308;364309;364310;364311;364312 288110;288111;288112;288113 288110 4 RDSFLAQTK Unmodified 1064.5615 0.56145784 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 24.571 24.32 2 0.0037208 35653 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 141.2 83.637 335500000 139060000 0 0 13958000 13727000 20327000 16463000 13169000 11028000 16986000 10990000 20176000 17747000 20985000 20891000 43526 2804 38989 364313;364314;364315;364316;364317;364318;364319;364320;364321;364322;364323;364324;364325 288114;288115;288116;288117;288118;288119;288120 288116 4 RDSLGAYASQDANEQGQDLGK Unmodified 2222.02 0.019966759 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44.301 43.286 3 1.6451E-86 55786 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 155.16 147.07 468680000 6559100 22713000 15826000 20292000 24667000 31517000 23669000 26379000 28201000 29672000 35179000 69479000 27627000 29937000 76962000 43527 4285 38990 364326;364327;364328;364329;364330;364331;364332;364333;364334;364335;364336;364337;364338;364339;364340 288121;288122;288123;288124;288125;288126;288127;288128;288129;288130;288131;288132;288133;288134;288135;288136;288137;288138;288139 288125 19 RDSLGNEESVDK Unmodified 1347.6266 0.62663688 5064 Q9UPZ3 HPS5 Hermansky-Pudlak syndrome 5 protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 19 2 2 2 2 1 2 2 1 1 2 2 15.239 15.429 2;3 0.0046377 14196 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.548 35.138 68626000 0 0 0 3332000 0 3897600 4708000 4720900 2594800 5406100 10286000 6192200 5857900 9797700 11833000 43528 5064 38991 364341;364342;364343;364344;364345;364346;364347;364348;364349;364350;364351;364352;364353;364354;364355;364356;364357;364358;364359 288140;288141;288142;288143;288144;288145 288141 6 RDSLGTYSSR Unmodified 1140.5523 0.55234972 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching 10 0 15 1 1 2 2 1 1 2 1 2 1 1 15.717 15.876 2;3 6.6252E-31 15263 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 179.95 147.8 170640000 0 0 0 11321000 5715600 11205000 14777000 5804900 7937200 16165000 14166000 27838000 0 21487000 34222000 43529 4285 38992 364360;364361;364362;364363;364364;364365;364366;364367;364368;364369;364370;364371;364372;364373;364374 288146;288147;288148 288148 1 RDSQADDPENIK Unmodified 1386.6375 0.63753591 329 O43432 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 14.84 14.982 3 0.016123 13651 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 32.659 23.377 65573000 0 0 0 6233700 3124200 4592500 4011000 4422400 3833000 7860900 9933400 7690000 7259800 6612700 0 43530 329 38993 364375;364376;364377;364378;364379;364380;364381;364382;364383;364384;364385 288149;288150;288151;288152;288153;288154 288153 5 RDSQGTYSSRDAELQDQEFGK Unmodified 2416.0891 0.089108957 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 45.273 39.673 4 0.0007597 50217 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 48.896 45.752 25581000 7389300 0 18191000 0 0 0 0 0 0 0 0 0 0 0 0 43531 4285 38994 364386;364387 288155;288156 288156 1 RDSVLTSK Unmodified 904.49779 0.49779495 562 O75937 DNAJC8 DnaJ homolog subfamily C member 8 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 11.711 8.5532 2 0.029772 13674 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 157.91 97.123 1812300000 1704000000 59534000 48835000 0 0 0 0 0 0 0 0 0 0 0 0 43532 562 38995 364388;364389;364390 288157;288158 288158 1 RDSYLPVGSHNLK Unmodified 1484.7736 0.77357588 2142 Q07864 POLE DNA polymerase epsilon catalytic subunit A yes yes 0 0 1 By MS/MS 2 0 1 1 50.528 42.627 3 0.049698 58970 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.115 31.209 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43533 2142 38996 364391 288159 288159 1 RDTIPTEGRSTDEAQGGK Unmodified 1916.9188 0.91879615 1181 P25054 APC Adenomatous polyposis coli protein yes yes 0 0 2 By MS/MS 2 0 1 1 20.915 18.112 3 0.0052915 23112 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 56.851 37.776 5596700 0 0 5596700 0 0 0 0 0 0 0 0 0 0 0 0 43534 1181 38997 364392 288160 288160 1 RDTNAPESFK Unmodified 1163.5571 0.55710075 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.932 16.104 2 0.042941 14755 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 70.028 70.028 233280000 0 0 0 7051400 10250000 12359000 14460000 14920000 15504000 14008000 20807000 29818000 31556000 22415000 40132000 43535 2556 38998 364393;364394;364395;364396;364397;364398;364399;364400;364401;364402;364403;364404 288161;288162 288162 1 RDVDFEGTDEPIFGK Unmodified 1723.8053 0.80532952 1451 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 74.34 68.732 3 0.0022986 84949 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 44.807 40.819 35329000 25679000 0 9649300 0 0 0 0 0 0 0 0 0 0 0 0 43536 1451 38999 364405;364406 288163;288164 288164 2 RDVSLGTYGSR Unmodified 1209.6102 0.61019895 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.507 29.699 3 0.0036427 32478 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 48.659 37.661 166500000 0 0 0 8445800 7139800 10201000 9894200 9219500 9567200 13518000 19528000 20299000 18167000 14074000 26447000 43537 4285 39000 364407;364408;364409;364410;364411;364412;364413;364414;364415;364416;364417;364418 288165;288166;288167;288168;288169;288170;288171;288172;288173;288174;288175;288176 288176 7 RDVSLGTYGSRAAEPQEQEFGK Unmodified 2424.167 0.16696535 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 2 By MS/MS 2 0 2 2 60.166 51.925 3;4 2.0087E-10 70620 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.255 43.706 28598000 28598000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43538 4285 39001 364419;364420 288177;288178;288179 288179 3 RDVTQLDPNK Unmodified 1184.6149 0.61494998 5037 Q9UNN5 FAF1 FAS-associated factor 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.962 22.168 2 0.0075983 23042 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 112.84 76.656 238370000 0 0 0 11567000 9195900 23751000 19712000 10637000 13062000 29910000 25514000 24154000 22776000 20302000 27785000 43539 5037 39002 364421;364422;364423;364424;364425;364426;364427;364428;364429;364430;364431;364432 288180;288181;288182;288183;288184;288185;288186;288187;288188;288189 288187 9 RDYDDMSPR Unmodified 1153.4822 0.48222124 1868 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 20.037 20.3 2 0.026195 19714 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 92.732 81.908 40757000 0 0 0 1332700 0 2897700 1610400 0 0 7793300 4472400 4587100 4408400 4229300 9425600 43540 1868 39003 364433;364434;364435;364436;364437;364438;364439;364440;364441 288190 288190 1 RDYVDEQTGDGPVK Unmodified 1577.7322 0.73216458 3892 Q96JG6 CCDC132 Coiled-coil domain-containing protein 132 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 7 3.69 1 1 3 2 1 1 1 33.408 28.895 3 0.0029989 36198 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 56.482 43.068 1904500 0 1904500 0 0 0 0 0 0 0 0 0 0 0 0 0 43541 3892 39004 364442;364443;364444;364445;364446 288191;288192;288193;288194;288195;288196 288196 6 REAAEVTRK Unmodified 1058.5833 0.58325592 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 2 By MS/MS 2 0 1 1 5.8126 2.4351 2 0.012373 5281 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 121.64 50.949 392370000 392370000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43542 2392 39005 364447 288197 288197 1 REAALPPVSPLK Unmodified 1276.7503 0.75032125 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.28 3.25 6 1 25 3 3 1 3 2 2 2 2 2 2 2 2 2 2 2 57.588 56.25 2;3 1.6963E-16 62827 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 143.5 105.42 2078700000 397110000 59239000 15620000 92754000 89738000 101950000 126760000 120630000 103910000 127630000 160160000 217930000 139030000 143270000 182990000 43543 2102 39006 364448;364449;364450;364451;364452;364453;364454;364455;364456;364457;364458;364459;364460;364461;364462;364463;364464;364465;364466;364467;364468;364469;364470;364471;364472;364473;364474;364475;364476;364477;364478;364479 288198;288199;288200;288201;288202;288203;288204;288205;288206;288207;288208;288209;288210;288211;288212;288213;288214;288215;288216;288217;288218;288219;288220;288221;288222;288223;288224;288225;288226;288227;288228;288229;288230;288231;288232;288233;288234;288235;288236;288237;288238;288239;288240;288241;288242;288243;288244;288245;288246;288247;288248;288249;288250;288251;288252;288253;288254;288255;288256;288257;288258;288259;288260;288261;288262 288205 56 REAEELIEIEIDGTEK Unmodified 1872.9317 0.93165225 2128 Q06546 GABPA GA-binding protein alpha chain yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 81.926 75.998 3 0.0030274 97827 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 37.157 32.102 14108000 14108000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43544 2128 39007 364480;364481 288263;288264 288264 2 REAFLEQFRK Unmodified 1322.7095 0.70951906 1152 P23258 TUBG1 Tubulin gamma-1 chain yes yes 0 0 2 By MS/MS By matching By matching 10 0 3 1 1 1 48.002 48.514 3 0.041206 54989 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 63.073 48.628 116040000 0 0 0 0 0 36310000 0 0 0 0 0 21130000 0 0 58605000 43545 1152 39008 364482;364483;364484 288265 288265 0 REAPDQDPGGPRAQELAQPGDLCK Unmodified 2604.2351 0.23506169 4721 Q9NX74 DUS2 tRNA-dihydrouridine(20) synthase [NAD(P)+]-like yes yes 0 0 2 By MS/MS 2 0 1 1 51.569 47.648 4 0.0030614 59872 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 32.491 24.869 3411900 0 0 3411900 0 0 0 0 0 0 0 0 0 0 0 0 43546 4721 39009 364485 288266;288267 288267 2 REAPVDVLTQIGR Unmodified 1452.8049 0.80487601 4186 Q9BVC6 TMEM109 Transmembrane protein 109 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.509 72.578 3 0.00034385 83996 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 65.472 51.792 135510000 0 0 0 7831100 5452900 9731000 8022000 15881000 6771200 15343000 9585500 15037000 8156200 13357000 20346000 43547 4186 39010 364486;364487;364488;364489;364490;364491;364492;364493;364494;364495;364496;364497 288268;288269;288270;288271;288272;288273;288274;288275;288276;288277;288278;288279;288280;288281;288282;288283;288284 288279 17 REATADDLIK Unmodified 1130.5932 0.5931519 2608 Q16531 DDB1 DNA damage-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 31.022 29.967 2 0.00030846 38321 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 122.13 49.65 937260000 47919000 419220000 118380000 16138000 14686000 17369000 18889000 12619000 14882000 22596000 36089000 40822000 32068000 41540000 84045000 43548 2608 39011 364498;364499;364500;364501;364502;364503;364504;364505;364506;364507;364508;364509;364510;364511;364512;364513 288285;288286;288287;288288;288289;288290;288291;288292 288289 8 REDEEESLNEVGYDDIGGCRK Unmodified 2469.0714 0.071409982 1755 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 0 2 By MS/MS By MS/MS 2 0 3 1 2 57.965 52.65 3;4 1.4167E-23 70597 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 106.86 98.676 94016000 49823000 0 44193000 0 0 0 0 0 0 0 0 0 0 0 0 43549 1755 39012 364514;364515;364516 288293;288294;288295;288296;288297 288293 5 REDEFVDLGDV Unmodified 1292.5885 0.58846046 4292 Q9C0I1 MTMR12 Myotubularin-related protein 12 yes yes 0 0 1 By MS/MS 2 0 1 1 82.018 73.888 2 0.025258 96889 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.067 61.219 17268000 17268000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43550 4292 39013 364517 288298 288298 0 REDFQDISVPVQEDELSK Unmodified 2133.0226 0.022592521 584 O94782 USP1 Ubiquitin carboxyl-terminal hydrolase 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 73.898 74.034 3 0.0010204 84455 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 30.083 20.799 40772000 0 0 0 0 0 8263500 0 0 0 8387800 8088700 6000100 4942400 5088900 0 43551 584 39014 364518;364519;364520;364521;364522;364523 288299;288300;288301;288302 288301 4 REDIQQFFEEFQSK Unmodified 1829.8584 0.85842773 3367 Q8N806 UBR7 Putative E3 ubiquitin-protein ligase UBR7 yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 91.526 85.854 3 0.0063452 109731 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.899 37.13 11093000 8807100 2285600 0 0 0 0 0 0 0 0 0 0 0 0 0 43552 3367 39015 364524;364525 288303;288304 288304 1 REDLVVAPAGITLK Unmodified 1480.8613 0.86132826 964 P12268 IMPDH2 Inosine-5'-monophosphate dehydrogenase 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.67 3.61 1 5 2 19 2 4 2 1 2 1 1 1 1 2 2 3 2 2 1 77.077 76.233 2;3 0.00044678 90149 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 70.98 63.069 1842300000 103140000 973680000 454440000 5509300 10634000 15654000 14367000 16459000 14513000 24787000 53253000 59699000 22645000 43161000 30348000 43553 964 39016 364526;364527;364528;364529;364530;364531;364532;364533;364534;364535;364536;364537;364538;364539;364540;364541;364542;364543;364544;364545;364546;364547;364548;364549;364550;364551;364552 288305;288306;288307;288308;288309;288310;288311;288312;288313;288314;288315;288316;288317;288318;288319;288320;288321;288322;288323;288324 288311 14 REDPSFERYPK Unmodified 1422.6892 0.68917755 4697 Q9NWH9 SLTM SAFB-like transcription modulator yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 27.834 28.012 3 0.0025838 29271 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 81.676 67.419 146760000 0 0 0 0 9121000 11938000 16786000 0 12422000 18098000 29502000 21794000 0 27099000 0 43554 4697 39017 364553;364554;364555;364556;364557;364558;364559;364560 288325;288326;288327 288327 3 REDQEGSPPETSLPYK Unmodified 1831.8588 0.85882166 917 P10244 MYBL2 Myb-related protein B yes yes 0 0 1 By MS/MS 10 0 1 1 43.604 43.104 3 0.048618 48722 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 20.368 10.409 2953100 0 0 0 0 2953100 0 0 0 0 0 0 0 0 0 0 43555 917 39018 364561 288328 288328 1 REDSFESLDSLGSR Unmodified 1596.738 0.73797824 3573 Q8WWI1 LMO7 LIM domain only protein 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.454 60.558 3 0.0096336 69364 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 21.272 17.499 65906000 0 0 0 3615100 2190100 6445100 4872500 3520600 5451000 6072800 7199300 9506500 5078200 4719100 7236200 43556 3573 39019 364562;364563;364564;364565;364566;364567;364568;364569;364570;364571;364572;364573 288329;288330;288331;288332;288333;288334;288335 288335 7 REDVWLPLMSYRNSLLAGGDDDTMSVISGISSR Unmodified 3639.7661 0.76613061 3326 Q8N3U4 STAG2 Cohesin subunit SA-2 yes yes 0 0 2 By MS/MS 3 0 1 1 42.564 37.826 7 0.051599 47131 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 4.6678 2.7623 1192600 0 1192600 0 0 0 0 0 0 0 0 0 0 0 0 0 43557 3326 39020 364574 288336 288336 1 REEAIQNFK Unmodified 1133.5829 0.58292157 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25.223 24.505 2 7.9331E-05 25240 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 155.07 109.99 1480200000 91778000 42846000 93037000 65296000 78081000 74853000 93584000 122110000 74058000 101040000 157730000 175450000 92826000 94494000 123000000 43558 213 39021 364575;364576;364577;364578;364579;364580;364581;364582;364583;364584;364585;364586;364587;364588;364589 288337;288338;288339;288340;288341;288342;288343;288344;288345;288346;288347;288348;288349;288350 288345 13 REEDEPEER Unmodified 1187.5055 0.50545911 2645 Q1KMD3 HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 6.0417 6.0794 3 0.02862 3955 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 35.652 27.432 9368600 0 0 0 1898500 0 2127000 3484300 0 0 0 0 0 0 1858700 0 43559 2645 39022 364590;364591;364592;364593 288351;288352 288351 2 REEDEPEERSGDETPGSEVPGDK Unmodified 2543.0896 0.089562466 2645 Q1KMD3 HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 2 2 2 2 2 1 1 2 2 1 27.41 27.547 3;4 1.94E-08 29249 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 62.064 53.674 183630000 0 0 0 8750400 7889100 20591000 7222300 9652800 18472000 25879000 7434100 20081000 23307000 19473000 14875000 43560 2645 39023 364594;364595;364596;364597;364598;364599;364600;364601;364602;364603;364604;364605;364606;364607;364608;364609;364610;364611;364612;364613;364614 288353;288354;288355;288356;288357;288358;288359;288360;288361;288362;288363;288364;288365;288366;288367;288368 288366 16 REEEDREVAAAVR Unmodified 1528.7594 0.75938238 3149 Q86UK7 ZNF598 Zinc finger protein 598 yes yes 0 0 2 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 21.073 21.432 3 0.035308 21485 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 66.533 47.209 41181000 0 0 0 0 0 18027000 0 4874500 0 0 0 10567000 0 0 7712800 43561 3149 39024 364615;364616;364617;364618 288369 288369 1 REEEEDFIR Unmodified 1221.5626 0.56258006 3733 Q96A65 EXOC4 Exocyst complex component 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 16 1 1 1 2 1 1 2 2 1 2 1 1 33.413 33.615 2;3 0.0089141 36789 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 49.3 32.669 106980000 0 0 0 7330200 4842600 6968200 10649000 8638400 4872700 13007000 14872000 6277200 16096000 9046400 4377900 43562 3733 39025 364619;364620;364621;364622;364623;364624;364625;364626;364627;364628;364629;364630;364631;364632;364633;364634 288370;288371;288372;288373;288374;288375 288371 5 REEEEFNTGPLSVLTQSVK Unmodified 2162.0855 0.085527128 1894 P62316 SNRPD2 Small nuclear ribonucleoprotein Sm D2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.53 3 2 11 2 2 1 1 1 1 1 1 1 1 1 1 1 1 86.53 85.212 3 7.2719E-42 98335 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 107.72 103.54 639480000 142150000 162330000 46720000 0 6158500 20402000 6450100 23132000 23830000 33292000 26953000 21824000 8239800 16389000 101600000 43563 1894 39026 364635;364636;364637;364638;364639;364640;364641;364642;364643;364644;364645;364646;364647;364648;364649;364650 288376;288377;288378;288379;288380;288381;288382;288383;288384;288385;288386;288387;288388;288389;288390;288391;288392;288393;288394;288395;288396;288397;288398;288399;288400;288401;288402;288403;288404;288405;288406;288407;288408 288393 33 REEEEQQEGGFASPR Unmodified 1747.7762 0.77615466 4002 Q96T88 UHRF1 E3 ubiquitin-protein ligase UHRF1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 23.955 24.147 3 1.7516E-19 24406 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.484 86.623 98677000 0 0 0 6720400 4943400 8529700 5845100 6102000 7341200 8364600 8351800 13768000 0 7479400 21231000 43564 4002 39027 364651;364652;364653;364654;364655;364656;364657;364658;364659;364660;364661 288409;288410;288411;288412;288413;288414;288415;288416;288417;288418 288412 10 REEEEQQEGGFASPRTGK Unmodified 2033.9403 0.94025987 4002 Q96T88 UHRF1 E3 ubiquitin-protein ligase UHRF1 yes yes 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 24.377 20.307 3 0.001442 28948 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.83 60.12 11784000 5230700 0 6553500 0 0 0 0 0 0 0 0 0 0 0 0 43565 4002 39028 364662;364663 288419 288419 1 REEELREYQER Unmodified 1535.7328 0.73283328 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 2 By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 19.126 19.361 3 0.0036567 19831 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 106.13 77.324 212770000 0 0 0 1341900 0 15777000 11971000 13867000 14179000 17919000 22412000 30088000 21865000 19309000 44039000 43566 2378 39029 364664;364665;364666;364667;364668;364669;364670;364671;364672;364673;364674 288420;288421;288422;288423 288421 1 REEENGTNTADHVR Unmodified 1626.7346 0.7346242 2880 Q6GYQ0 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.6137 6.7379 3 3.8628E-12 4948 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 100.45 84.104 73917000 0 0 0 2477200 3285300 5577600 4335100 4396000 4831200 5934600 6925500 8568300 8522900 7088600 11975000 43567 2880 39030 364675;364676;364677;364678;364679;364680;364681;364682;364683;364684;364685;364686 288424;288425;288426;288427;288428;288429;288430;288431;288432 288430 9 REEETLDTIK Unmodified 1232.6248 0.62484596 4655;5016 Q9NUU7;Q9UMR2 DDX19A;DDX19B ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX19B no no 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.19 3.15 1 3 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 28.982 28.048 2;3 3.0878E-05 35241 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 126.31 74.318 629920000 659110 101180000 25260000 21947000 25935000 69609000 37295000 25978000 36977000 46799000 41661000 45834000 40229000 54250000 56304000 43568 4655;5016 39031 364687;364688;364689;364690;364691;364692;364693;364694;364695;364696;364697;364698;364699;364700;364701;364702 288433;288434;288435;288436;288437;288438;288439;288440;288441;288442;288443;288444;288445;288446;288447;288448 288439 14 REEGDPSPHSGGVCK Unmodified 1610.7107 0.71071763 488 O75376 NCOR1 Nuclear receptor corepressor 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 7.2045 7.3463 3 0.000228 4786 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.874 44.258 69821000 0 0 0 1871600 3278200 0 3514800 0 4481300 6953200 10723000 6927400 9469500 9108200 13493000 43569 488 39032 364703;364704;364705;364706;364707;364708;364709;364710;364711;364712 288449;288450;288451;288452;288453;288454 288450 4 REEGWWVVIGDAK Unmodified 1543.7783 0.77832691 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 1 By MS/MS 2 0 1 1 89.849 81.719 3 0.01244 106289 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 37.013 24.452 7936300 7936300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43570 528 39033 364713 288455 288455 0 REEHLSEEAIK Unmodified 1339.6732 0.67319314 2973 Q6ULP2 AFTPH Aftiphilin yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 20.169 20.09 3 0.0029575 26094 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 56.205 36.546 65211000 0 0 7848800 2762700 0 6923600 0 3892200 0 5787400 6164700 11294000 7650800 0 12887000 43571 2973 39034 364714;364715;364716;364717;364718;364719;364720;364721;364722 288456;288457;288458;288459 288458 4 REELCRQIQEEEDEK Unmodified 1989.9062 0.90618255 368 O43805 SSNA1 Sjoegren syndrome nuclear autoantigen 1 yes yes 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 39.853 34.769 3 0.00025484 47849 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.605 37.069 32708000 28173000 0 4535200 0 0 0 0 0 0 0 0 0 0 0 0 43572 368 39035 364723;364724 288460 288460 0 REELFIVSK Unmodified 1119.6288 0.62880913 1013 P15121 AKR1B1 Aldose reductase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 53.995 53.424 2 0.0075347 77262 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 117.89 48.292 1131000000 563980000 0 0 6591200 4973900 14054000 16550000 7080900 5781100 20496000 89354000 77554000 0 70371000 254190000 43573 1013 39036 364725;364726;364727;364728;364729;364730;364731;364732;364733;364734;364735;364736 288461;288462 288461 2 REELITNWEQIR Unmodified 1585.8213 0.82125436 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 72.199 72.602 3 0.00085454 83056 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.528 34.201 13204000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13204000 43574 2344 39037 364737;364738 288463;288464 288464 2 REEMVNYFAR Unmodified 1313.6187 0.61865515 2831 Q5VZE5 NAA35 N-alpha-acetyltransferase 35, NatC auxiliary subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 50.858 51.3 3 0.002897 58092 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 58.676 48.989 16940000 0 0 0 0 0 0 0 0 0 5229200 0 11710000 0 0 0 43575 2831 39038 364739;364740;364741 288465;288466;288467 288465 3 REEPEALYAAVNK Unmodified 1488.7573 0.75725712 4774 Q9NZM3 ITSN2 Intersectin-2 yes yes 0 0 1 By MS/MS 2 0 1 1 56.032 52.155 3 0.012658 65280 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 43.594 34.107 4241600 0 0 4241600 0 0 0 0 0 0 0 0 0 0 0 0 43576 4774 39039 364742 288468 288468 1 REEPMEEEEEPEQK Oxidation (M) 1803.7469 0.74688795 1596 P49756 RBM25 RNA-binding protein 25 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.63 13.792 3 7.973E-15 13031 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 116.58 112.04 353710000 0 0 0 19457000 21022000 21765000 24339000 20307000 31379000 30584000 26446000 46292000 45422000 29632000 37069000 43577 1596 39040 364743;364744;364745;364746;364747;364748;364749;364750;364751;364752;364753;364754 288469;288470;288471;288472;288473;288474;288475;288476;288477;288478;288479;288480;288481;288482 288479 2567 14 REEPMEEEEEPEQK Unmodified 1787.752 0.75197332 1596 P49756 RBM25 RNA-binding protein 25 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.4 21.604 3 1.078E-40 22260 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 134.37 114.25 656300000 0 0 0 40282000 28100000 46724000 64943000 43972000 57754000 59159000 76892000 54780000 49390000 83750000 50551000 43578 1596 39040 364755;364756;364757;364758;364759;364760;364761;364762;364763;364764;364765;364766 288483;288484;288485;288486;288487;288488;288489;288490;288491;288492;288493;288494;288495;288496;288497 288488 15 REEPMEEEEEPEQKPCLK Unmodified 2286.0144 0.014412375 1596 P49756 RBM25 RNA-binding protein 25 yes yes 0 0 2 By matching By MS/MS By MS/MS 10 0 3 1 1 1 35.471 35.53 4 0.012283 38341 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 30.945 25.417 16178000 0 0 0 3745300 0 0 0 6033700 0 0 6399200 0 0 0 0 43579 1596 39041 364767;364768;364769 288498 288498 1 REESEAVEAGDPPEELR Unmodified 1911.881 0.88101366 4386 Q9H3S7 PTPN23 Tyrosine-protein phosphatase non-receptor type 23 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 42.512 42.681 3 0.015316 46407 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 26.237 14.967 198490000 0 0 0 36059000 0 34919000 16454000 0 27970000 37046000 5887200 0 0 19391000 20762000 43580 4386 39042 364770;364771;364772;364773;364774;364775;364776;364777 288499;288500;288501;288502;288503 288501 3 REESPMDVDQPSPSAQDTQSIASDGTPQGEK Oxidation (M) 3302.4481 0.44808675 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 1 1 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 45.866 46.193 3 6.1412E-34 50996 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.548 71.296 50354000 0 0 0 0 0 10056000 6526600 3737000 3147700 0 5371600 8921400 0 5028400 7564300 43581 3119 39043 364778;364779;364780;364781;364782;364783;364784;364785 288504;288505;288506;288507 288506 4734 4 REESPMDVDQPSPSAQDTQSIASDGTPQGEK Unmodified 3286.4532 0.45317213 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 55.156 55.3 3 1.1232E-46 62105 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.866 80.546 50097000 0 0 0 2573800 0 5700000 0 0 3740100 8328700 7298100 0 4628600 0 17828000 43582 3119 39043 364786;364787;364788;364789;364790;364791;364792 288508;288509;288510;288511;288512;288513 288510 6 REFEPASAR Unmodified 1061.5254 0.52540669 2702 Q53GS9 USP39 U4/U6.U5 tri-snRNP-associated protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 15.391 15.657 2 0.03706 15100 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 85.676 48.117 82520000 0 0 0 18768000 0 0 0 0 0 0 0 18272000 0 17331000 28148000 43583 2702 39044 364793;364794;364795;364796 288514 288514 0 REFGEEALNSLQK Unmodified 1519.7631 0.76307078 4206 Q9BW91 NUDT9 ADP-ribose pyrophosphatase, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 63.932 57.365 2;3 3.4076E-10 76821 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.507 76.103 86507000 31284000 41884000 13340000 0 0 0 0 0 0 0 0 0 0 0 0 43584 4206 39045 364797;364798;364799;364800 288515;288516;288517;288518;288519;288520 288517 6 REFIQEPAK Unmodified 1116.5928 0.59275797 208 O14744 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 6.9 3.81 3 1 6 1 2 1 1 1 1 1 1 1 30.058 28.415 2 0.0025249 41167 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 135.43 91.034 803460000 490980000 61940000 136140000 0 0 12929000 0 0 0 13068000 19408000 19704000 16156000 0 33138000 43585 208 39046 364801;364802;364803;364804;364805;364806;364807;364808;364809;364810 288521;288522;288523;288524;288525 288524 3 REFLTEEEPDDKGDK Unmodified 1806.8272 0.82718718 1566 P49336 CDK8 Cyclin-dependent kinase 8 yes yes 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 38.077 33.073 3 0.010822 46296 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.209 50.735 8876400 5991000 0 2885400 0 0 0 0 0 0 0 0 0 0 0 0 43586 1566 39047 364811;364812 288526 288526 1 REFPTVPLVK Unmodified 1184.6917 0.69174374 2638 Q16851 UGP2 UTP--glucose-1-phosphate uridylyltransferase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.08 2.56 3 23 2 1 2 2 2 1 2 2 2 2 2 2 2 2 66.847 66.169 2;3 0.0027188 75093 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.998 35.189 395160000 191620000 0 1407700 6326900 2630500 20326000 3436200 13535000 5753800 17765000 23509000 20931000 14565000 18708000 54655000 43587 2638 39048 364813;364814;364815;364816;364817;364818;364819;364820;364821;364822;364823;364824;364825;364826;364827;364828;364829;364830;364831;364832;364833;364834;364835;364836;364837;364838 288527;288528;288529;288530;288531;288532;288533;288534;288535;288536;288537 288536 10 REGFCLQNVDK Unmodified 1364.6507 0.65068356 520 O75582 RPS6KA5 Ribosomal protein S6 kinase alpha-5 yes yes 0 0 1 By MS/MS 2 0 1 1 53.32 45.256 3 0.015458 62328 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 35.268 22.346 9021600 9021600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43588 520 39049 364839 288538 288538 1 REGIHANEIK Unmodified 1165.6204 0.62036971 2809 Q5VT25 CDC42BPA Serine/threonine-protein kinase MRCK alpha yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 14.725 14.905 3 0.036831 14466 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 24.853 12.277 15949000 0 0 0 1060000 0 1755000 0 0 1866700 0 0 3910100 3948100 0 3408700 43589 2809 39050 364840;364841;364842;364843;364844;364845 288539 288539 1 REGITAIGGTSTISSEGTQHSYSEEEK Unmodified 2853.3264 0.32643869 2421 Q14651 PLS1 Plastin-1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 56.314 50.263 4 0.00081481 68477 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 34.769 28.702 32542000 17168000 0 15375000 0 0 0 0 0 0 0 0 0 0 0 0 43590 2421 39051 364846;364847 288540;288541;288542 288541 3 REGLGLDVER Unmodified 1142.6044 0.60438529 265 O15226 NKRF NF-kappa-B-repressing factor yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 41.318 41.416 3 0.045088 45167 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 22.885 10.269 36969000 0 0 0 2688300 2225300 0 1595400 3584200 1535600 5037000 0 0 8455500 2998000 8849900 43591 265 39052 364848;364849;364850;364851;364852;364853;364854;364855;364856 288543 288543 1 REGNSSQNWQR Unmodified 1360.6232 0.62322325 775 P04150 NR3C1 Glucocorticoid receptor yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 1 1 2 8.958 9.108 3 0.00010459 6386 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 100.93 77.919 65424000 0 0 0 2169900 2998900 4507700 4369900 3291400 3052400 3551200 13179000 8486100 6692300 4630900 8493600 43592 775 39053 364857;364858;364859;364860;364861;364862;364863;364864;364865;364866;364867;364868;364869 288544;288545;288546;288547;288548;288549;288550;288551;288552;288553;288554 288548 9 REGSCSDFQFK Unmodified 1359.5877 0.58774895 3566 Q8WVV4 POF1B Protein POF1B yes yes 0 0 1 By MS/MS 10 0 1 1 34.809 34.377 3 0.0012672 38114 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 62.694 51.593 36014000 0 0 0 36014000 0 0 0 0 0 0 0 0 0 0 0 43593 3566 39054 364870 288555 288555 1 REGTGTEMPMIGDR Unmodified 1548.7025 0.70246113 2080 Q02790 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 1 2 1 1 1 1 2 47.163 47.368 3 0.0014317 53681 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 45.614 31.868 307650000 0 0 0 9246000 6141400 16965000 10547000 13053000 5489300 24748000 28418000 35842000 16772000 29639000 110790000 43594 2080 39055 364871;364872;364873;364874;364875;364876;364877;364878;364879;364880;364881;364882;364883;364884 288556;288557;288558;288559;288560;288561;288562;288563;288564;288565 288556 7 REGTGTEMPMIGDR 2 Oxidation (M) 1580.6923 0.69229037 2080 Q02790 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 0 2 1 By MS/MS 10 0 1 1 21.188 21.35 3 0.0074273 22127 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 41.967 23.371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43595 2080 39055 364885 288566 288566 3387;3388 1 REGTGTEMPMIGDR Oxidation (M) 1564.6974 0.69737575 2080 Q02790 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 0 1 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 27.289 27.602 3 0.00080663 28459 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 48.527 45.055 38277000 0 0 0 0 0 4081700 2782800 0 0 5076100 0 6680400 0 6001700 13654000 43596 2080 39055 364886;364887;364888;364889;364890;364891 288567;288568 288568 3387;3388 2 REGTPPPPPPSR Unmodified 1286.6731 0.67313356 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 15.492 15.665 3 0.020274 14132 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 25.322 12.706 70159000 0 0 0 6202200 0 5168300 5562600 0 4089600 7230900 0 10760000 9964400 10653000 10528000 43597 5262 39056 364892;364893;364894;364895;364896;364897;364898;364899;364900 288569;288570;288571;288572;288573;288574 288572 6 REGTPPPPPPSRDLTEAYK Unmodified 2107.0698 0.069817485 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 0 2 By MS/MS By MS/MS 2 0 4 2 2 51.461 45.471 3;4 6.5171E-05 62279 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.221 66.106 38757000 29440000 0 9317700 0 0 0 0 0 0 0 0 0 0 0 0 43598 5262 39057 364901;364902;364903;364904 288575;288576;288577;288578;288579 288575 4 REHALTSGTIK Unmodified 1211.6622 0.66223452 2522 Q15369 TCEB1 Transcription elongation factor B polypeptide 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.56 3 4 2 26 3 3 2 2 3 2 2 2 2 2 2 2 3 2 15.661 15.008 2;3 0.00010656 13885 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 80.318 57.306 3168800000 1369400000 146630000 0 121110000 37812000 76369000 81723000 67222000 50020000 179520000 187160000 197870000 181630000 171130000 301200000 43599 2522 39058 364905;364906;364907;364908;364909;364910;364911;364912;364913;364914;364915;364916;364917;364918;364919;364920;364921;364922;364923;364924;364925;364926;364927;364928;364929;364930;364931;364932;364933;364934;364935;364936 288580;288581;288582;288583;288584;288585;288586;288587;288588;288589;288590;288591;288592;288593;288594;288595;288596 288590 12 REHTLQASNQSEIIQK Unmodified 1880.9704 0.97043779 2195 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF yes yes 0 0 1 By MS/MS 2 0 1 1 37.27 30.772 3 0.00033307 42952 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.685 57.554 5606600 5606600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43600 2195 39059 364937 288597 288597 1 REIEELTQENGTLK Unmodified 1658.8475 0.84752869 1575 P49454 CENPF Centromere protein F yes yes 0 0 1 By MS/MS 2 0 1 1 48.932 45.03 3 0.0019708 56731 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 59.607 46.189 4663000 0 0 4663000 0 0 0 0 0 0 0 0 0 0 0 0 43601 1575 39060 364938 288598;288599 288598 2 REIELYGCPPDFPDEEEEEEETSVK Unmodified 3025.3023 0.30225736 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 78.89 73.537 3;4 0.0037927 92656 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 30.249 29.427 53263000 15303000 0 37959000 0 0 0 0 0 0 0 0 0 0 0 0 43602 4819 39061 364939;364940 288600;288601 288601 2 REIELYGCPPDFPDEEEEEEETSVKTEDIIIK Unmodified 3837.7666 0.76662692 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 0 2 By MS/MS 2 0 1 1 88.628 80.497 4 4.4816E-07 104669 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.415 36.367 15069000 15069000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43603 4819 39062 364941 288602 288602 1 REILHNTEK Unmodified 1138.6095 0.60947067 2661 Q32MZ4 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.06 2.49 1 1 14 2 1 1 1 2 1 1 2 1 1 1 1 1 7.6984 7.3181 2;3 0.0010498 4292 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 91.549 54.205 178180000 39897000 0 0 4923900 4164500 6838800 7303100 8551900 6076200 13880000 33976000 10559000 10535000 11179000 20296000 43604 2661 39063 364942;364943;364944;364945;364946;364947;364948;364949;364950;364951;364952;364953;364954;364955;364956;364957 288603;288604;288605;288606;288607;288608;288609;288610;288611;288612;288613;288614;288615;288616;288617;288618 288613 15 REISETEAK Unmodified 1061.5353 0.53530267 1092 P19532 TFE3 Transcription factor E3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.7723 6.8959 2 0.049528 4307 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.1 27.539 44650000 0 0 0 2962500 2786400 3040300 3802900 2846700 4027100 3259700 6254800 2524900 3082600 2832500 7229100 43605 1092 39064 364958;364959;364960;364961;364962;364963;364964;364965;364966;364967;364968;364969 288619 288619 1 REIYDQFGEEGLK Unmodified 1582.7627 0.76273643 4868 Q9UDY4 DNAJB4 DnaJ homolog subfamily B member 4 yes yes 0 0 1 By MS/MS 2 0 1 1 63.565 59.806 3 0.00066372 74320 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 67.964 62.244 7628600 0 0 7628600 0 0 0 0 0 0 0 0 0 0 0 0 43606 4868 39065 364970 288620 288620 1 RELAENGGVLQLVGPEEK Unmodified 1937.0218 0.02180466 4802 Q9P206 KIAA1522 Uncharacterized protein KIAA1522 yes yes 0 0 1 By MS/MS 10 0 1 1 71.972 72.374 3 0.022388 82819 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 31.917 22.753 15796000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15796000 43607 4802 39066 364971 288621 288621 0 RELDVEEAHAASTEEK Unmodified 1812.849 0.84898525 3773 Q96C86 DCPS m7GpppX diphosphatase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 6.44 3.98 4 5 1 1 2 1 1 1 1 1 29.694 28.012 3;4 9.0508E-09 29120 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.714 76.542 158020000 14977000 19836000 70573000 0 0 8692700 0 0 0 0 9971500 10748000 7389300 0 15830000 43608 3773 39067 364972;364973;364974;364975;364976;364977;364978;364979;364980 288622;288623;288624;288625;288626;288627;288628;288629;288630 288623 7 RELEDHIRK Unmodified 1194.6469 0.64691881 4094 Q9BQE5 APOL2 Apolipoprotein L2 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 10.194 10.363 3 0.029695 9323 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 80.787 62.181 39059000 0 0 0 1994500 0 0 0 0 0 0 0 14325000 10774000 0 11965000 43609 4094 39068 364981;364982;364983;364984 288631;288632 288632 1 RELHGQNPVVTPCNK Unmodified 1747.8788 0.87878601 2620 Q16630 CPSF6 Cleavage and polyadenylation specificity factor subunit 6 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 4 2 22 4 1 1 1 1 2 1 3 2 1 1 2 3 3 2 24.703 23.878 2;3;4 5.3194E-20 24619 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 91.789 67.947 1216500000 654190000 5946000 5594000 22975000 18596000 37067000 25045000 45377000 26476000 33106000 36629000 82154000 82478000 71903000 68927000 43610 2620 39069 364985;364986;364987;364988;364989;364990;364991;364992;364993;364994;364995;364996;364997;364998;364999;365000;365001;365002;365003;365004;365005;365006;365007;365008;365009;365010;365011;365012 288633;288634;288635;288636;288637;288638;288639;288640;288641;288642;288643;288644;288645;288646;288647;288648;288649;288650;288651;288652;288653;288654;288655;288656;288657;288658 288654 24 RELHPPATSHEAPGTK Unmodified 1726.8751 0.87508084 2518 Q15345 LRRC41 Leucine-rich repeat-containing protein 41 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 17.963 18.076 4 0.0091223 18174 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 27.324 19.349 29184000 0 0 0 0 0 0 5417600 9043200 5895100 8828100 0 0 0 0 0 43611 2518 39070 365013;365014;365015;365016 288659;288660 288659 2 RELPSLSPAPDTGLSPSK Unmodified 1850.9738 0.97379183 4840 Q9UBF8 PI4KB Phosphatidylinositol 4-kinase beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 64.15 63.245 3 0.00019991 84876 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.938 50.395 55363000 14230000 0 0 0 3284000 7870400 3271100 0 0 0 0 5829500 8356900 3830700 8690600 43612 4840 39071 365017;365018;365019;365020;365021;365022;365023;365024 288661;288662;288663;288664;288665;288666;288667;288668;288669 288666 9 RELQELVQYPVEHPDK Unmodified 1979.0112 0.011239973 1755 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.73 3.84 1 6 4 15 5 4 2 2 2 2 2 2 1 2 2 65.774 64.013 3;4 6.2487E-06 84451 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.817 89.781 1267900000 435520000 527410000 47864000 0 0 14357000 0 0 7037800 9911300 19730000 19715000 5618300 20327000 160410000 43613 1755 39072 365025;365026;365027;365028;365029;365030;365031;365032;365033;365034;365035;365036;365037;365038;365039;365040;365041;365042;365043;365044;365045;365046;365047;365048;365049;365050 288670;288671;288672;288673;288674;288675;288676;288677;288678;288679;288680;288681;288682;288683;288684;288685;288686 288680 14 RELQVLSEQYSQK Unmodified 1606.8315 0.83148469 4363 Q9H2D6 TRIOBP TRIO and F-actin-binding protein yes yes 0 0 1 By MS/MS 2 0 1 1 56.588 48.44 3 0.0030029 66078 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 44.436 34.364 21850000 21850000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43614 4363 39073 365051 288687 288687 1 REMDQTMAANAQK 2 Oxidation (M) 1524.6661 0.66607562 1268 P30085 CMPK1 UMP-CMP kinase yes yes 0 2 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.4 3.68 4 1 10 3 2 1 1 1 1 1 1 1 1 1 1 5.7985 4.933 2;3 1.4089E-06 5233 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 100.22 94.739 210200000 0 58993000 82832000 7473100 2296900 0 4509800 0 2454300 6256600 5548900 7577400 4722100 6947600 20587000 43615 1268 39074 365052;365053;365054;365055;365056;365057;365058;365059;365060;365061;365062;365063;365064;365065;365066 288688;288689;288690;288691;288692;288693;288694;288695;288696;288697 288694 1870;1871 10 REMDQTMAANAQK Unmodified 1492.6762 0.67624638 1268 P30085 CMPK1 UMP-CMP kinase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 6.76 3.87 6 1 10 2 3 2 1 2 2 1 2 2 18.881 17.564 2;3 1.6345E-10 22400 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 101.39 87.671 354020000 22351000 154590000 78563000 0 0 0 5677700 0 0 0 14262000 19392000 5131700 14217000 39832000 43616 1268 39074 365067;365068;365069;365070;365071;365072;365073;365074;365075;365076;365077;365078;365079;365080;365081;365082;365083 288698;288699;288700;288701;288702;288703;288704;288705;288706;288707;288708;288709 288707 12 REMDQTMAANAQK Oxidation (M) 1508.6712 0.671161 1268 P30085 CMPK1 UMP-CMP kinase yes yes 0 1 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.71 3.61 4 10 1 1 2 1 1 1 1 1 1 2 1 1 8.317 7.5174 2;3 0.0013988 5347 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.467 35.634 56990000 3054100 17015000 6732200 0 553430 1105100 1359700 1217700 1401600 2133100 14637000 0 1550800 0 6230100 43617 1268 39074 365084;365085;365086;365087;365088;365089;365090;365091;365092;365093;365094;365095;365096;365097 288710;288711;288712;288713 288711 1870;1871 4 REMVSQYLYTSK Oxidation (M) 1519.7341 0.73407884 417 O60610 DIAPH1 Protein diaphanous homolog 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 2 1 1 1 1 1 1 1 1 44.444 43.018 2;3 0.00011742 60701 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 92.039 84.981 133480000 31347000 0 0 0 10651000 12740000 0 8315600 12872000 0 20066000 0 10962000 11232000 15294000 43618 417 39075 365098;365099;365100;365101;365102;365103;365104;365105;365106;365107 288714;288715;288716;288717;288718;288719;288720;288721 288717 523 6 REMVSQYLYTSK Unmodified 1503.7392 0.73916421 417 O60610 DIAPH1 Protein diaphanous homolog 1 yes yes 0 0 1 By MS/MS 2 0 2 2 60.95 52.709 2;3 0.0016811 71334 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.877 69.408 29058000 29058000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43619 417 39075 365108;365109 288722;288723 288722 1 RENATVMDK Unmodified 1062.5128 0.51279309 1250 P29466 CASP1 Caspase-1;Caspase-1 subunit p20;Caspase-1 subunit p10 no no 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 10.244 7.4898 2 0.026992 9768 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 95.358 50.666 28204000 0 16165000 12039000 0 0 0 0 0 0 0 0 0 0 0 0 43620 1250 39076 365110;365111 288724 288724 0 RENATVMDK Oxidation (M) 1078.5077 0.50770771 1250 P29466 CASP1 Caspase-1;Caspase-1 subunit p20;Caspase-1 subunit p10 no no 0 1 1 By MS/MS 2 0 1 1 2.0614 -0.091099 2 0.048264 1681 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 60.019 29.407 7344100 0 0 7344100 0 0 0 0 0 0 0 0 0 0 0 0 43621 1250 39076 365112 288725 288725 0 RENEELTEK Unmodified 1146.5517 0.55168102 2296 Q13464 ROCK1 Rho-associated protein kinase 1 yes yes 0 0 1 By MS/MS 2 0 1 1 26.365 23.358 2 0.043574 29748 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 87.181 1.5111 8354900 0 0 8354900 0 0 0 0 0 0 0 0 0 0 0 0 43622 2296 39077 365113 288726 288726 1 RENEVLEAWK Unmodified 1272.6463 0.64625011 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS 2 0 1 1 61.381 53.126 3 0.020877 71689 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.894 38.89 12700000 12700000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43623 2047 39078 365114 288727 288727 1 RENFCNIHVSLVPQPSSTGEQK Unmodified 2526.2285 0.22851975 1061 P17812 CTPS1 CTP synthase 1 yes yes 0 0 1 By MS/MS 2 0 1 1 77.342 69.211 4 0.0013845 91203 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.526 44.538 9784900 9784900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43624 1061 39079 365115 288728 288728 1 RENPEYFPR Unmodified 1206.5782 0.57817054 4570 Q9NQG6 MIEF1 Mitochondrial dynamics protein MID51 yes yes 0 0 1 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 33.603 33.73 3 0.036682 36874 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 24.882 17.993 39712000 0 0 0 0 3971800 5346200 3966200 0 3644900 5785600 6400400 0 6647500 3949200 0 43625 4570 39080 365116;365117;365118;365119;365120;365121;365122;365123 288729 288729 1 RENPHDAVVFHPK Unmodified 1544.7848 0.78480927 865 P08397 HMBS Porphobilinogen deaminase yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 26.238 26.496 4 0.047138 28148 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 18.731 11.007 22134000 0 0 0 0 0 0 0 2723600 3539500 4940500 5007400 0 5922800 0 0 43626 865 39081 365124;365125;365126;365127;365128 288730 288730 1 RENPLLPEEEEQR Unmodified 1637.8009 0.80091285 1974 P78344 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 25 2 2 2 2 2 2 2 2 2 2 3 2 42.552 42.732 2;3 2.299E-08 47220 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 78.401 58.661 1279200000 0 0 0 42885000 75514000 98674000 77931000 85398000 88143000 100690000 156960000 129630000 115070000 129850000 178460000 43627 1974 39082 365129;365130;365131;365132;365133;365134;365135;365136;365137;365138;365139;365140;365141;365142;365143;365144;365145;365146;365147;365148;365149;365150;365151;365152;365153 288731;288732;288733;288734;288735;288736;288737;288738;288739;288740;288741;288742;288743;288744;288745;288746 288743 4 RENPLLPEEEEQRAIAK Unmodified 2021.0542 0.054167421 1974 P78344 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.22 2.37 4 37 2 2 2 2 2 2 5 3 3 3 3 5 5 2 52.523 51.955 3;4 3.1377E-35 58727 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 127.97 110.48 639850000 48616000 0 22319000 36675000 28300000 36146000 37544000 76885000 36060000 38022000 49795000 57643000 30667000 49271000 91912000 43628 1974 39083 365154;365155;365156;365157;365158;365159;365160;365161;365162;365163;365164;365165;365166;365167;365168;365169;365170;365171;365172;365173;365174;365175;365176;365177;365178;365179;365180;365181;365182;365183;365184;365185;365186;365187;365188;365189;365190;365191;365192;365193;365194 288747;288748;288749;288750;288751;288752;288753;288754;288755;288756;288757;288758;288759;288760;288761;288762;288763;288764;288765;288766;288767;288768;288769;288770;288771;288772;288773;288774;288775;288776;288777;288778;288779;288780;288781;288782;288783;288784;288785;288786;288787 288750 33 RENSTLDVECHEK Unmodified 1615.726 0.72603334 2977 Q6UVJ0 SASS6 Spindle assembly abnormal protein 6 homolog yes yes 0 0 1 By matching By matching By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 16.515 16.75 3 0.015822 15921 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 20.783 12.249 8575000 0 0 0 0 0 1615900 0 0 0 1786500 1776400 0 1566700 1829400 0 43629 2977 39084 365195;365196;365197;365198;365199 288788;288789 288788 2 REPAEQPGDGER Unmodified 1339.6117 0.61165551 2532;2377 Q15424;Q14151 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 no no 0 0 1 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 1 2 2 2 7.3113 7.4374 2;3 0.00022427 4865 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.015 81.808 152580000 0 0 0 6950800 5814200 6865700 11115000 7470500 6537100 10082000 32499000 12093000 14202000 14691000 24263000 43630 2532;2377 39085 365200;365201;365202;365203;365204;365205;365206;365207;365208;365209;365210;365211;365212;365213;365214;365215;365216;365217;365218;365219;365220;365221;365222 288790;288791;288792;288793;288794;288795;288796 288792 4 REPAPNAPGDIAAAFPAER Unmodified 1948.9755 0.97552317 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 69.221 69.527 3 0.021283 79359 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 22.7 16.719 11770000 0 0 0 0 0 0 3634900 0 0 0 0 0 0 0 8135200 43631 645 39086 365223;365224 288797 288797 1 REPEDEGEDDD Unmodified 1304.464 0.4640478 1404 P39687 ANP32A Acidic leucine-rich nuclear phosphoprotein 32 family member A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.46 3.82 1 3 9 2 1 1 1 1 1 1 1 1 1 1 1 14.861 14.681 2 2.226E-55 92284 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 217.47 217.47 193890000 125050000 22823000 1840000 0 2192800 4982900 0 1601000 4628700 2733000 8624100 4861300 0 3851700 10705000 43632 1404 39087 365225;365226;365227;365228;365229;365230;365231;365232;365233;365234;365235;365236;365237 288798;288799;288800;288801;288802;288803;288804;288805;288806;288807;288808;288809 288803 12 REPENEEEVDILSLSEPVK Unmodified 2211.0907 0.090672086 5000 Q9ULM3 YEATS2 YEATS domain-containing protein 2 yes yes 0 0 1 By MS/MS 2 0 1 1 84.869 76.739 3 5.3026E-09 100227 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.742 62.646 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43633 5000 39088 365238 288810 288810 1 REPGYTPPGAGNQNPPGMYPVTGPK Oxidation (M) 2597.2333 0.23327077 3706 Q93052 LPP Lipoma-preferred partner yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 56.058 54.043 3 3.1601E-92 71875 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 143.29 141.79 124490000 83202000 0 16108000 0 5485100 4440600 0 0 0 0 0 0 5992600 9263900 0 43634 3706 39089 365239;365240;365241;365242;365243;365244 288811;288812;288813;288814 288813 5288 4 REPGYTPPGAGNQNPPGMYPVTGPK Unmodified 2581.2384 0.23835615 3706 Q93052 LPP Lipoma-preferred partner yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 63.627 62.592 3 1.8403E-30 82717 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.888 74.9 222030000 114650000 0 14241000 6134100 3294600 4611600 3451400 7398500 3911200 0 14738000 14008000 0 0 35595000 43635 3706 39089 365245;365246;365247;365248;365249;365250;365251;365252;365253;365254;365255 288815;288816;288817;288818;288819;288820;288821;288822;288823;288824;288825;288826;288827;288828 288820 14 REPQTLAVQNPPK Unmodified 1476.8049 0.80487601 3189 Q86X53 ERICH1 Glutamate-rich protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 33.716 32.413 3 0.0066467 35174 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 37.613 24.413 35488000 13973000 0 3578700 0 3593800 0 0 0 2890900 0 4911700 0 4105700 2434600 0 43636 3189 39090 365256;365257;365258;365259;365260;365261;365262 288829;288830;288831;288832 288829 4 REPSINHFVK Unmodified 1225.6568 0.65675521 5000 Q9ULM3 YEATS2 YEATS domain-containing protein 2 yes yes 0 0 1 By MS/MS 10 0 1 1 30.72 31.433 3 0.01277 33701 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 40.154 26.036 6629600 0 0 0 0 0 0 0 0 0 0 0 6629600 0 0 0 43637 5000 39091 365263 288833 288833 1 REPTVSSFYVK Unmodified 1311.6823 0.68230126 4188 Q9BVI4 NOC4L Nucleolar complex protein 4 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 2 2 2 1 1 1 2 2 2 50.004 50.075 2;3 0.0028806 57280 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 51.013 32.877 140940000 0 0 0 13747000 16562000 14637000 0 0 8233900 14326000 11452000 0 19379000 16996000 25604000 43638 4188 39092 365264;365265;365266;365267;365268;365269;365270;365271;365272;365273;365274;365275;365276;365277;365278 288834;288835;288836;288837;288838 288837 4 REPVPFPSGSAGPGPR Unmodified 1606.8216 0.82158871 4832 Q9UBB5 MBD2 Methyl-CpG-binding domain protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 51.198 51.254 3 0.015094 57787 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 27.714 16.435 213390000 0 0 0 17461000 18050000 22282000 25095000 15651000 0 22405000 0 0 30827000 20946000 40677000 43639 4832 39093 365279;365280;365281;365282;365283;365284;365285;365286;365287 288839;288840;288841;288842;288843;288844;288845 288840 7 REPVSLEEWTK Unmodified 1372.6987 0.69867961 3485 Q8TC07 TBC1D15 TBC1 domain family member 15 yes yes 0 0 1 By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 1 2 1 1 2 2 2 2 2 2 58.614 58.849 2;3 0.0074527 66111 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 31.693 16.154 51164000 0 0 0 0 507060 2499300 3023800 1611300 1433900 4545800 5358200 5400200 6306900 4882000 15595000 43640 3485 39094 365288;365289;365290;365291;365292;365293;365294;365295;365296;365297;365298;365299;365300;365301;365302;365303;365304;365305 288846;288847 288846 2 REQEPTERPLK Unmodified 1381.7314 0.73137672 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 12.212 12.387 3 0.002872 11681 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 84.479 55.715 279820000 0 0 0 0 19582000 19686000 21569000 20655000 21343000 31835000 19441000 38576000 34380000 20029000 32724000 43641 4139 39095 365306;365307;365308;365309;365310;365311;365312;365313;365314;365315;365316 288848;288849;288850;288851;288852;288853;288854;288855 288849 5 REQEVNILK Unmodified 1127.6299 0.62987176 1356 P35579 MYH9 Myosin-9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 33.647 32.553 2 0.011065 42090 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 103.56 11.124 6296800000 220040000 222370000 456790000 246400000 243130000 388040000 235090000 219960000 238220000 606570000 580840000 1385200000 296200000 264640000 693360000 43642 1356 39096 365317;365318;365319;365320;365321;365322;365323;365324;365325;365326;365327;365328;365329;365330;365331;365332 288856;288857;288858;288859;288860;288861;288862;288863;288864;288865;288866;288867;288868;288869;288870;288871;288872;288873;288874;288875;288876;288877 288865 20 REQEVNILKK Unmodified 1255.7248 0.72483478 1356 P35579 MYH9 Myosin-9 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 22.883 23.136 3 0.014866 23076 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 86.344 73.336 118740000 0 0 0 11001000 0 2937300 9506700 6626200 3892500 7363100 8174200 39827000 10665000 5647800 13105000 43643 1356 39097 365333;365334;365335;365336;365337;365338;365339;365340;365341;365342;365343 288878;288879;288880;288881 288881 2 REQGNIEEAVR Unmodified 1299.6531 0.6531264 271 O15294 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 1 1 2 1 2 1 1 2 2 1 2 21.984 22.235 2;3 0.0012015 23368 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 85.845 76.412 435790000 0 0 0 26238000 19834000 33257000 27046000 32744000 30701000 40669000 15408000 58283000 53254000 38146000 60213000 43644 271 39098 365344;365345;365346;365347;365348;365349;365350;365351;365352;365353;365354;365355;365356;365357;365358;365359;365360 288882;288883;288884;288885;288886;288887;288888;288889;288890 288882 4 REQIPAGTLLLAVEDPEK Unmodified 1978.0735 0.073505879 3300 Q8N0W3 FUK L-fucose kinase yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 89.457 84.174 3 1.5938E-05 107761 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.519 65.148 16907000 15463000 0 1443700 0 0 0 0 0 0 0 0 0 0 0 0 43645 3300 39099 365361;365362 288891;288892;288893;288894 288891 4 REQISENPTEATDIGFGNR Unmodified 2133.0087 0.008673791 2113 Q05209 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 59.629 59.811 3 6.4856E-47 68164 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 124.91 115.49 106860000 0 0 0 0 5633300 9486000 5637300 4689300 8784200 13722000 13365000 12700000 8561700 7791100 16489000 43646 2113 39100 365363;365364;365365;365366;365367;365368;365369;365370;365371;365372;365373 288895;288896;288897;288898;288899;288900;288901;288902;288903;288904;288905;288906;288907 288895 13 REQISENPTEATDIGFGNRCGK Unmodified 2478.1557 0.15574873 2113 Q05209 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 yes yes 0 0 2 By MS/MS 2 0 1 1 62.142 53.886 3 1.6389E-09 72920 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.876 38.688 9466900 9466900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43647 2113 39101 365374 288908 288908 1 REQITLPEQAK Unmodified 1311.7147 0.71466402 598 O94888 UBXN7 UBX domain-containing protein 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39.633 39.175 2;3 0.00032189 50240 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 77.597 66.014 222620000 0 2586700 36273000 9057300 7035300 14370000 11259000 8560700 8200600 20528000 19883000 22334000 19106000 14366000 29058000 43648 598 39102 365375;365376;365377;365378;365379;365380;365381;365382;365383;365384;365385;365386;365387;365388 288909;288910;288911;288912;288913;288914;288915;288916;288917 288913 7 REQLMREEAEQK Oxidation (M) 1561.7519 0.75185416 2407 Q14444 CAPRIN1 Caprin-1 yes yes 0 1 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 2 2 1 1 2 2 1 2 2 2 7.2066 7.3259 3;4 0.01459 5097 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 41.383 24.171 650810000 0 0 0 37288000 43411000 51201000 45450000 7179400 9312700 95606000 89550000 66824000 58663000 63959000 82370000 43649 2407 39103 365389;365390;365391;365392;365393;365394;365395;365396;365397;365398;365399;365400;365401;365402;365403;365404;365405;365406;365407;365408;365409 288918;288919;288920;288921;288922 288919 3944 4 REQLMREEAEQK Unmodified 1545.7569 0.75693954 2407 Q14444 CAPRIN1 Caprin-1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 14.761 14.957 3 0.0033504 13599 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 99.5 46.052 365600000 0 0 0 26039000 0 19480000 28434000 8424700 21812000 29826000 58480000 37483000 35768000 21981000 77874000 43650 2407 39103 365410;365411;365412;365413;365414;365415;365416;365417;365418;365419;365420 288923;288924;288925;288926 288925 0 RESGAAEQVDNK Unmodified 1302.6164 0.61640654 4825 Q9P2R3 ANKFY1 Rabankyrin-5 yes yes 0 0 1 By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 6.87 3.84 5 1 9 1 3 2 1 1 1 1 1 1 1 1 1 6.506 5.4273 2;3 2.3423E-17 6055 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 156.48 94.28 199890000 11753000 115880000 57717000 0 0 879250 1448800 1522200 1405700 1187600 2204500 0 1181500 2127000 2584200 43651 4825 39104 365421;365422;365423;365424;365425;365426;365427;365428;365429;365430;365431;365432;365433;365434;365435 288927;288928;288929;288930;288931 288930 4 RESGSPYSVLVDTK Unmodified 1536.7784 0.77838649 5098 Q9Y2D9 ZNF652 Zinc finger protein 652 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 54.016 54.094 3 0.00010539 61272 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 61.409 50.463 60450000 0 0 0 0 4792200 8302100 7626300 0 0 15204000 14815000 0 9710400 0 0 43652 5098 39105 365436;365437;365438;365439;365440;365441;365442;365443 288932;288933;288934;288935;288936;288937;288938;288939;288940 288932 9 RESPEVLLTLDILK Unmodified 1624.94 0.93997251 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 1 By MS/MS 2 0 1 1 97.408 89.278 3 0.0013272 115268 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.128 34.496 18551000 18551000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43653 2392 39106 365444 288941 288941 1 RESPSPAPK Unmodified 967.50869 0.50869399 3279 Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 yes yes 0 0 1 By MS/MS By matching By MS/MS 2 0 3 1 1 1 6.8886 3.8967 2 0.023584 5919 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 104.01 57.998 263130000 163650000 40211000 59266000 0 0 0 0 0 0 0 0 0 0 0 0 43654 3279 39107 365445;365446;365447 288942;288943 288943 2 RESPSPAPKPR Unmodified 1220.6626 0.66256887 3279 Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 6.713 6.8238 3 0.049323 4435 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 45.829 35.28 38490000 0 0 0 3402400 4855900 0 6980200 3612800 894610 0 6859600 4675900 4071800 3136900 0 43655 3279 39108 365448;365449;365450;365451;365452;365453;365454;365455;365456 288944 288944 1 RESQSVEEALK Unmodified 1274.6466 0.64664404 1612 P49915 GMPS GMP synthase [glutamine-hydrolyzing] yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.86 3.4 4 4 20 3 3 2 1 1 2 2 1 2 2 2 1 2 2 2 25.94 24.854 2;3 1.0661E-15 31836 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 138.76 51.505 1482800000 82354000 536170000 577760000 8424200 5448600 53431000 14014000 8409900 10594000 27365000 25805000 16299000 26587000 27442000 62707000 43656 1612 39109 365457;365458;365459;365460;365461;365462;365463;365464;365465;365466;365467;365468;365469;365470;365471;365472;365473;365474;365475;365476;365477;365478;365479;365480;365481;365482;365483;365484 288945;288946;288947;288948;288949;288950;288951;288952;288953;288954;288955;288956;288957;288958;288959;288960;288961;288962;288963;288964;288965;288966;288967 288961 16 RESQSVEEALKK Unmodified 1402.7416 0.74160705 1612 P49915 GMPS GMP synthase [glutamine-hydrolyzing] yes yes 0 0 2 By MS/MS 2 0 1 1 28.255 22.737 3 0.025294 32022 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.097 29.492 33675000 33675000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43657 1612 39110 365485 288968 288968 1 RESVELALK Unmodified 1043.5975 0.597509 360 O43719 HTATSF1 HIV Tat-specific factor 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 48.716 42.421 2 0.025978 58375 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.64 38.164 992450000 515650000 396510000 80294000 0 0 0 0 0 0 0 0 0 0 0 0 43658 360 39111 365486;365487;365488;365489 288969;288970;288971;288972 288969 3 RESVLTATSILNNPIVK Unmodified 1854.0575 0.057461885 2721 Q5BKZ1 ZNF326 DBIRD complex subunit ZNF326 yes yes 0 0 1 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 82.173 82.336 3 0.00011556 94878 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.495 58.676 34729000 0 0 0 0 0 0 0 1430800 1867200 4689800 1855800 0 0 5682000 19203000 43659 2721 39112 365490;365491;365492;365493;365494;365495 288973;288974 288974 2 RETAATFLK Unmodified 1035.5713 0.57129425 3476 Q8TAT6 NPLOC4 Nuclear protein localization protein 4 homolog yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 43.03 37.085 2 0.018816 50967 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.41 36.792 370550000 346790000 23760000 0 0 0 0 0 0 0 0 0 0 0 0 0 43660 3476 39113 365496;365497 288975 288975 1 RETDDEGEDD Unmodified 1179.4164 0.41636933 3651 Q92688 ANP32B Acidic leucine-rich nuclear phosphoprotein 32 family member B yes yes 0 0 1 By MS/MS 1 0 1 1 106.23 111.5 2 0.0081996 92134 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 125.16 125.16 59637000 59637000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43661 3651 39114 365498 288976 288976 1 RETFVQAVSK Unmodified 1163.6299 0.62987176 3194 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 32.748 32.402 2 0.00010205 49381 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 133.75 87.78 169240000 63177000 0 0 5157400 7794900 12208000 6773500 5987900 6586900 9495400 9969700 14089000 9208600 8996300 9791100 43662 3194 39115 365499;365500;365501;365502;365503;365504;365505;365506;365507;365508;365509;365510;365511 288977;288978;288979 288978 2 RETGVDLTK Unmodified 1017.5455 0.54547343 1399 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 3.8 3.12 3 1 1 1 2 1 1 20.354 17.426 2 0.025555 22101 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 102.06 35.379 858300000 149900000 376480000 289160000 0 0 0 0 0 0 0 0 0 0 0 42756000 43663 1399 39116 365512;365513;365514;365515;365516 288980;288981;288982;288983;288984 288984 5 RETTGTGPNVYHENDTIAK Unmodified 2102.0029 0.0028601316 2683 Q4G0F5 VPS26B Vacuolar protein sorting-associated protein 26B yes yes 0 0 1 By MS/MS By MS/MS 2 0 4 2 2 35.585 30.682 3;4 0.010068 42754 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 32.121 25.081 93949000 46333000 0 47616000 0 0 0 0 0 0 0 0 0 0 0 0 43664 2683 39117 365517;365518;365519;365520 288985;288986;288987 288985 2 REVDDLGPEVGDIK Unmodified 1540.7733 0.77330111 295 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.24 3.69 6 3 16 3 4 2 1 1 2 2 2 1 1 1 2 1 2 57.294 55.381 2;3 6.563E-17 68307 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 147.71 147.71 685780000 209890000 294590000 32139000 8307700 7560900 13739000 10991000 11956000 7655200 9176900 10432000 22557000 0 11541000 35239000 43665 295 39118 365521;365522;365523;365524;365525;365526;365527;365528;365529;365530;365531;365532;365533;365534;365535;365536;365537;365538;365539;365540;365541;365542;365543;365544;365545 288988;288989;288990;288991;288992;288993;288994;288995;288996;288997;288998;288999;289000;289001;289002;289003;289004;289005;289006;289007;289008;289009;289010;289011;289012;289013 289003 21 REVENSEDPK Unmodified 1201.5575 0.55749468 1073 P18206 VCL Vinculin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.33 2 2 11 2 2 1 1 1 1 1 1 1 1 1 1 1 6.0778 5.2479 2;3 0.017271 5428 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.639 72.379 727660000 8805400 657190000 0 8581300 2005800 9314500 4632800 0 3429200 4115600 4773100 4264100 2561900 4281800 13709000 43666 1073 39119 365546;365547;365548;365549;365550;365551;365552;365553;365554;365555;365556;365557;365558;365559;365560 289014;289015;289016;289017;289018 289015 5 REVGVQSSER Unmodified 1145.5789 0.57889882 4327 Q9H0G5 NSRP1 Nuclear speckle splicing regulatory protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 7.4317 7.61 3 0.0049713 5604 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 42.083 21.306 39846000 0 0 0 0 0 2696700 3842300 3268900 0 3796500 12077000 7345900 0 4429600 2388600 43667 4327 39120 365561;365562;365563;365564;365565;365566;365567;365568 289019;289020;289021;289022;289023 289021 2 REVVVYAPLSK Unmodified 1259.7238 0.72377215 4617 Q9NRZ9 HELLS Lymphoid-specific helicase yes yes 0 0 1 By MS/MS By MS/MS 6 4 1 1 1 1 56.893 52.5 3 0.005936 72648 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 59.898 44.696 18889000 11384000 0 0 0 7504500 0 0 0 0 0 0 0 0 0 0 43668 4617 39121 365569;365570 289024;289025;289026 289024 3 REWLEVLEDTK Unmodified 1416.7249 0.72489436 3284 Q8IYI6 EXOC8 Exocyst complex component 8 yes yes 0 0 1 By MS/MS 2 0 1 1 85.788 77.658 3 0.014967 101292 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 37.594 22.217 4917100 4917100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43669 3284 39122 365571 289027 289027 1 RFASGGCDNLIK Unmodified 1336.6558 0.65576893 1769 P55735 SEC13 Protein SEC13 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 2 1 1 1 1 1 1 1 1 1 1 1 38.301 37.427 2;3 7.7844E-13 52754 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 132.32 70.119 526910000 246350000 0 0 19019000 0 19633000 12983000 17460000 18277000 20481000 29278000 31173000 34093000 29396000 48772000 43670 1769 39123 365572;365573;365574;365575;365576;365577;365578;365579;365580;365581;365582;365583;365584 289028;289029;289030;289031;289032;289033;289034;289035;289036;289037;289038 289033 10 RFCEGPSEPSGDPPR Unmodified 1686.742 0.74201776 2706 Q53LP3 SOWAHC Ankyrin repeat domain-containing protein SOWAHC yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 30.779 31.004 3 0.0050007 33575 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 35.091 27.721 37142000 0 0 0 0 3558100 6084300 3457200 0 3744500 4717000 4355700 6616100 0 0 4608900 43671 2706 39124 365585;365586;365587;365588;365589;365590;365591;365592 289039;289040;289041 289040 3 RFCVDQPTVPQTASES Unmodified 1820.8363 0.83631208 4095 Q9BQE9 BCL7B B-cell CLL/lymphoma 7 protein family member B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 57.592 56.941 2 0.00049992 64713 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.332 72.47 118510000 37391000 0 0 7256200 6472400 6873000 5030400 0 0 7340300 9401800 9675000 7787500 6545400 14733000 43672 4095 39125 365593;365594;365595;365596;365597;365598;365599;365600;365601;365602;365603 289042;289043;289044;289045;289046;289047;289048;289049 289049 8 RFDAMPFTLR Oxidation (M) 1268.6336 0.63357693 5067 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 yes yes 0 1 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 64.348 64.549 3 0.0026384 72934 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.314 45.31 54608000 0 0 0 0 0 3148700 1796100 1853800 1845900 0 0 0 0 8017700 37946000 43673 5067 39126 365604;365605;365606;365607;365608;365609 289050;289051 289050 6432 2 RFDAMPFTLR Unmodified 1252.6387 0.63866231 5067 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 yes yes 0 0 1 By MS/MS 10 0 1 1 76.886 77.173 3 0.0016894 88557 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.584 34.977 18339000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18339000 43674 5067 39126 365610 289052 289052 1 RFDAQTGADREVQR Unmodified 1647.8077 0.80772956 1482 P43686 PSMC4 26S protease regulatory subunit 6B yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 2 2 1 1 1 2 2 2 1 1 21.732 21.988 3;4 2.5617E-31 22924 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 134.9 103.08 1182300000 0 0 0 0 72623000 168100000 45704000 38638000 33908000 170820000 148400000 380940000 36077000 42722000 44385000 43675 1482 39127 365611;365612;365613;365614;365615;365616;365617;365618;365619;365620;365621;365622;365623;365624;365625;365626 289053;289054;289055;289056;289057;289058;289059;289060;289061;289062;289063;289064;289065;289066 289054 14 RFDDAVVQSDMK Unmodified 1409.6609 0.66091389 934 P11142 HSPA8 Heat shock cognate 71 kDa protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 43.479 43.653 2;3 5.4668E-23 47552 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 155.97 117.88 4390800000 0 0 0 122710000 121370000 256590000 157470000 224140000 158230000 255290000 525680000 614980000 267340000 378630000 1308300000 43676 934 39128 365627;365628;365629;365630;365631;365632;365633;365634;365635;365636;365637;365638;365639;365640;365641;365642;365643;365644;365645;365646;365647;365648;365649;365650 289067;289068;289069;289070;289071;289072;289073;289074;289075;289076;289077;289078;289079;289080;289081;289082;289083 289072 15 RFDDAVVQSDMK Oxidation (M) 1425.6558 0.65582851 934 P11142 HSPA8 Heat shock cognate 71 kDa protein yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 2 2 1 1 2 1 2 1 2 2 2 31.068 31.206 2;3 6.1558E-23 32558 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 153.54 115.45 2049100000 0 0 0 135920000 151940000 52001000 50452000 182430000 99938000 214800000 265310000 375910000 261780000 258590000 0 43677 934 39128 365651;365652;365653;365654;365655;365656;365657;365658;365659;365660;365661;365662;365663;365664;365665;365666;365667;365668 289084;289085;289086;289087;289088;289089;289090;289091;289092;289093;289094;289095;289096 289090 1211 11 RFDDPGLMLMGFK 2 Oxidation (M) 1557.732 0.73197035 973 P12956 XRCC6 X-ray repair cross-complementing protein 6 yes yes 0 2 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 75.231 74.04 3 0.00022801 85173 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 62.891 60.256 92938000 19097000 0 0 0 0 0 0 14347000 18474000 0 13589000 12902000 0 14528000 0 43678 973 39129 365669;365670;365671;365672;365673;365674 289097;289098;289099;289100;289101;289102 289097 1292;1293 6 RFDEATQLR Unmodified 1134.5782 0.57817054 1063 P17858 PFKL ATP-dependent 6-phosphofructokinase, liver type yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 30.55 30.755 2 2.7336E-05 31961 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 133.99 91.159 625520000 0 0 0 39176000 41310000 0 52050000 0 0 77157000 62785000 145630000 0 66522000 140890000 43679 1063 39130 365675;365676;365677;365678;365679;365680;365681;365682 289103;289104;289105;289106;289107 289104 3 RFDEILEASDGIMVARGDLGIEIPAEK Unmodified 2943.5012 0.50117236 1000 P14618 PKM Pyruvate kinase PKM yes yes 0 0 2 By MS/MS 2.33 0.471 2 1 3 96.523 89.934 3;4 3.6119E-137 114841 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 130.57 119.56 47743000 47743000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43680 1000 39131 365683;365684;365685 289108;289109;289110 289110 3 RFDTEEEFK Unmodified 1199.5459 0.54586736 1733 P54136 RARS Arginine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 1 2 39.706 35.656 2;3 0.0009331 44944 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 107.21 87.934 118670000 0 23703000 94965000 0 0 0 0 0 0 0 0 0 0 0 0 43681 1733 39132 365686;365687;365688 289111;289112;289113 289112 1 RFDTEEEFKK Unmodified 1327.6408 0.64083038 1733 P54136 RARS Arginine--tRNA ligase, cytoplasmic yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28.704 27.911 3 0.0043985 36669 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 96.171 84.305 613820000 157260000 17019000 23801000 21669000 11836000 30979000 26226000 17671000 23698000 38236000 54234000 56499000 27981000 29969000 76732000 43682 1733 39133 365689;365690;365691;365692;365693;365694;365695;365696;365697;365698;365699;365700;365701;365702;365703 289114;289115;289116;289117;289118;289119;289120;289121;289122;289123;289124 289121 3 RFDVSGYPTLK Unmodified 1281.6717 0.67173657 982 P13667 PDIA4 Protein disulfide-isomerase A4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.08 2.56 3 23 2 1 2 2 2 2 2 2 2 2 2 2 2 1 61.064 60.351 2;3 0.00033171 68559 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 121.36 71.547 721890000 241850000 0 3360300 26309000 6671400 21457000 30294000 39259000 23878000 34729000 78839000 53531000 41028000 44891000 75789000 43683 982 39134 365704;365705;365706;365707;365708;365709;365710;365711;365712;365713;365714;365715;365716;365717;365718;365719;365720;365721;365722;365723;365724;365725;365726;365727;365728;365729 289125;289126;289127;289128;289129;289130;289131;289132;289133;289134;289135;289136;289137;289138;289139;289140;289141;289142 289134 8 RFEEGVGKPAK Unmodified 1216.6564 0.65642086 3284 Q8IYI6 EXOC8 Exocyst complex component 8 yes yes 0 0 2 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 13.535 13.707 3 0.0021603 12573 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 78.692 66.142 66817000 0 0 0 1026000 3794800 2089300 0 5397700 0 7002000 10057000 13541000 9893600 5007800 9007700 43684 3284 39135 365730;365731;365732;365733;365734;365735;365736;365737;365738;365739 289143;289144;289145 289145 3 RFEELGVK Unmodified 976.53418 0.53418046 2106 Q04760 GLO1 Lactoylglutathione lyase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 7 3.69 2 2 6 2 1 1 1 1 1 1 1 1 36.825 35.044 2 0.0086659 45338 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 124.98 77.916 4138000000 3585500000 48956000 185590000 0 0 0 0 4066200 0 5516500 66402000 78327000 0 4145700 159530000 43685 2106 39136 365740;365741;365742;365743;365744;365745;365746;365747;365748;365749 289146;289147;289148;289149;289150;289151 289151 5 RFEETGQELAELLEEEK Unmodified 2048.9902 0.99022976 1371 P36405 ARL3 ADP-ribosylation factor-like protein 3 yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 2 2 2 2 89.518 84.548 3 9.8105E-58 107616 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 154.52 128.16 203120000 197830000 5292100 0 0 0 0 0 0 0 0 0 0 0 0 0 43686 1371 39137 365750;365751;365752;365753 289152;289153;289154;289155 289155 4 RFEIINAIYEPTEEECEWKPDEEDEISEELK Unmodified 3868.7513 0.75131121 1761 P55209 NAP1L1 Nucleosome assembly protein 1-like 1 yes yes 0 0 2 By MS/MS 2 0 1 1 94.098 85.968 4 0.010527 111229 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 20.92 19.364 16146000 16146000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43687 1761 39138 365754 289156 289156 1 RFENAPDSAK Unmodified 1133.5465 0.54653606 3217 Q8IUD2 ERC1 ELKS/Rab6-interacting/CAST family member 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 11.78 11.927 2 0.014772 10538 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 88.496 50.937 74869000 0 0 0 3624500 3369800 4198400 4395700 3628600 3931300 8330100 6092500 10472000 6595100 7112200 13119000 43688 3217 39139 365755;365756;365757;365758;365759;365760;365761;365762;365763;365764;365765;365766 289157;289158;289159 289159 3 RFEQEINAK Unmodified 1133.5829 0.58292157 586 O94804 STK10 Serine/threonine-protein kinase 10 yes yes 0 0 1 By MS/MS 2 0 1 1 28.574 23.056 2 0.019192 32430 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 109.71 68.266 40536000 40536000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43689 586 39140 365767 289160 289160 1 RFEQQQK Unmodified 962.49338 0.49337828 5023 Q9UMZ2 SYNRG Synergin gamma yes yes 0 0 1 By MS/MS 2 0 1 1 5.7269 2.3494 2 0.043724 5212 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 124.59 24.528 138330000 138330000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43690 5023 39141 365768 289161 289161 1 RFGEYNSNMSPEEK Unmodified 1686.7308 0.73078437 1970 P78316 NOP14 Nucleolar protein 14 yes yes 0 0 1 By MS/MS 2 0 1 1 43.069 36.275 3 0.0058155 49902 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.545 40.964 16169000 16169000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43691 1970 39142 365769 289162;289163 289162 2 RFGFPEGSVELYAEK Unmodified 1727.8519 0.85188578 1156 P23396 RPS3 40S ribosomal protein S3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 6.17 3.85 2 1 3 1 1 1 1 1 1 79.372 77.611 3 1.7583E-07 97631 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.37 72.554 43444000 2199000 22390000 1946900 0 0 2155200 0 0 0 0 0 0 0 1754700 12998000 43692 1156 39143 365770;365771;365772;365773;365774;365775 289164;289165;289166 289164 2 RFGPYYTEPVIAGLDPK Unmodified 1921.9938 0.993799 1588 P49720 PSMB3 Proteasome subunit beta type-3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS 5.71 3.73 2 2 3 2 2 1 1 1 84.021 81.26 3 0.00014918 93148 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.159 41.157 325360000 262360000 19877000 0 0 0 0 0 0 0 0 0 4650300 0 2064700 36409000 43693 1588 39144 365776;365777;365778;365779;365780;365781;365782 289167;289168;289169;289170;289171;289172;289173 289170 5 RFGVPVIADGGIQNVGHIAK Unmodified 2047.1327 0.13269251 964 P12268 IMPDH2 Inosine-5'-monophosphate dehydrogenase 2 yes yes 0 0 1 By MS/MS 10 0 1 1 77.054 77.318 3 0.031808 88811 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 18.947 17.413 12616000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12616000 43694 964 39145 365783 289174 289174 1 RFLSLSAADGSDGSHDSWDVER Unmodified 2406.0836 0.083629648 5193 Q9Y4C1 KDM3A Lysine-specific demethylase 3A yes yes 0 0 1 By MS/MS 2 0 1 1 9.3235 7.0797 6 0.049147 9375 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 7.4461 4.0265 356170 0 0 356170 0 0 0 0 0 0 0 0 0 0 0 0 43695 5193 39146 365784 289175 289175 0 RFNDPSGCAPSPGAYDVK Unmodified 1936.8738 0.87376021 478 O75330 HMMR Hyaluronan mediated motility receptor yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 48.792 47.927 3 0.0025368 54215 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 33.405 28.904 66614000 19923000 0 0 0 0 0 0 0 5171400 8557500 10317000 0 6539200 7077100 9028200 43696 478 39147 365785;365786;365787;365788;365789;365790;365791 289176;289177;289178;289179 289179 4 RFPGYDSESK Unmodified 1184.5462 0.54620171 1508 P46777 RPL5 60S ribosomal protein L5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 6 12 2 2 2 1 1 1 1 1 1 1 1 1 1 1 1 26.65 25.316 2;3 9.2284E-68 26495 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 200.6 158.32 1841300000 1272900000 63950000 88431000 25924000 25026000 29989000 29735000 24114000 27099000 35454000 36571000 42854000 42140000 38715000 58343000 43697 1508 39148 365792;365793;365794;365795;365796;365797;365798;365799;365800;365801;365802;365803;365804;365805;365806;365807;365808;365809 289180;289181;289182;289183;289184;289185;289186;289187;289188;289189;289190;289191;289192;289193;289194;289195;289196;289197;289198;289199;289200;289201;289202;289203 289200 22 RFQGEYGSDPEERPPNLK Unmodified 2118.013 0.013030887 2853 Q68CQ4 DIEXF Digestive organ expansion factor homolog yes yes 0 0 2 By MS/MS 2 0 1 1 51.861 43.9 3 0.0084323 60527 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.554 38.3 11737000 11737000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43698 2853 39149 365810 289204 289204 1 RFQTYAAPSMAQP Unmodified 1466.6976 0.69763375 2885 Q6IBW4 NCAPH2 Condensin-2 complex subunit H2 yes yes 0 0 1 By matching By matching By MS/MS 10 0 3 1 1 1 58.652 58.949 2 0.023493 66541 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.548 37.768 11425000 0 0 0 0 0 0 1783200 2275400 0 0 0 0 0 0 7366700 43699 2885 39150 365811;365812;365813 289205 289205 1 RFQVEQIGENK Unmodified 1346.6943 0.69426293 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 1 By MS/MS 2 0 1 1 48.971 41.145 3 0.0088278 56912 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.629 29.998 40988000 40988000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43700 5049 39151 365814 289206 289206 1 RFSDQFPLPLK Unmodified 1346.7347 0.73467118 3692 Q92973 TNPO1 Transportin-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 2 1 2 1 2 1 2 1 2 2 78.563 78.704 2;3 0.00049573 90386 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.27 44.615 166970000 0 0 0 0 0 26610000 4315500 12399000 7637200 13965000 7125500 29623000 8730900 18338000 38230000 43701 3692 39152 365815;365816;365817;365818;365819;365820;365821;365822;365823;365824;365825;365826;365827;365828;365829;365830 289207;289208;289209;289210;289211;289212;289213;289214;289215 289211 9 RFSEGVLQSPSQDQEK Unmodified 1833.8857 0.88570511 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 40.993 41.385 3 0.0011307 46013 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 44.662 33.563 122190000 0 0 0 0 0 0 0 0 13574000 0 32005000 0 27429000 8297100 40885000 43702 4285 39153 365831;365832;365833;365834;365835 289216;289217;289218;289219;289220 289218 5 RFSGCTLTDGTLK Unmodified 1454.7188 0.71876312 2805 Q5VIR6 VPS53 Vacuolar protein sorting-associated protein 53 homolog yes yes 0 0 1 By MS/MS 2 0 1 1 56.573 48.425 2 0.037997 66186 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.829 23.56 11852000 11852000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43703 2805 39154 365836 289221 289221 1 RFSMVVQDGIVK Unmodified 1377.7439 0.74385566 1263 P30044 PRDX5 Peroxiredoxin-5, mitochondrial yes yes 0 0 1 By MS/MS By matching By MS/MS 6.8 3.92 2 3 2 1 2 68.527 65.54 2;3 0.0023722 88905 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.122 48.954 85377000 43189000 0 0 0 0 0 0 0 0 0 0 0 0 5057000 37131000 43704 1263 39155 365837;365838;365839;365840;365841 289222;289223;289224;289225 289224 2 RFSMVVQDGIVK Oxidation (M) 1393.7388 0.73877028 1263 P30044 PRDX5 Peroxiredoxin-5, mitochondrial yes yes 0 1 1 By MS/MS By matching By MS/MS By MS/MS 5.2 3.92 3 2 2 1 1 1 55.782 51.546 2;3 0.0006724 71964 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.345 62.781 162930000 95193000 11058000 0 0 0 0 0 0 0 0 23746000 32933000 0 0 0 43705 1263 39155 365842;365843;365844;365845;365846 289226;289227;289228;289229;289230 289228 1862 2 RFSVYVTESQPDLSGK Unmodified 1811.9054 0.90537792 2395 Q14232 EIF2B1 Translation initiation factor eIF-2B subunit alpha yes yes 0 0 1 By MS/MS 2 0 1 1 72.929 64.733 3 5.6859E-06 85823 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.488 82.647 38964000 38964000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43706 2395 39156 365847 289231;289232 289232 2 RFTSYVQEK Unmodified 1156.5877 0.58767259 5242 Q9Y5P4 COL4A3BP Collagen type IV alpha-3-binding protein yes yes 0 0 1 By MS/MS 2 0 1 1 35.361 29.014 2 0.040162 40753 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 100.02 52.935 18221000 18221000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43707 5242 39157 365848 289233 289233 0 RFVDPNTQEK Unmodified 1232.6149 0.61494998 1802 P58107 EPPK1 Epiplakin yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 20.013 18.866 2 0.0032269 27261 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 118.71 80.984 39957000 23351000 0 1101000 0 2941200 0 3370000 0 0 0 0 4298500 0 0 4895400 43708 1802 39158 365849;365850;365851;365852;365853;365854 289234;289235 289234 1 RFVMEVEVDGQK Oxidation (M) 1451.7079 0.70786408 2207;3991 Q12906;Q96SI9 ILF3;STRBP Interleukin enhancer-binding factor 3;Spermatid perinuclear RNA-binding protein no no 0 1 1 By MS/MS 2.5 0.5 1 1 2 47.049 40.492 3 0.0062139 56110 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.423 31.155 110440000 110440000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43709 2207;3991 39159 365855;365856 289236;289237 289237 3595 2 RFVMEVEVDGQK Unmodified 1435.7129 0.71294946 2207;3991 Q12906;Q96SI9 ILF3;STRBP Interleukin enhancer-binding factor 3;Spermatid perinuclear RNA-binding protein no no 0 0 1 By MS/MS 2 0 1 1 69.306 61.011 3 0.020943 81563 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.725 25.523 4534700 4534700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43710 2207;3991 39159 365857 289238 289238 1 RFVSEAELDER Unmodified 1349.6575 0.65754307 4308 Q9GZU8 FAM192A Protein FAM192A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.326 40.505 3 0.00015482 43847 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.864 60.925 132710000 0 0 0 7014300 6320900 9468400 8379200 6734200 7936000 12205000 14191000 16427000 9960200 9283100 24787000 43711 4308 39160 365858;365859;365860;365861;365862;365863;365864;365865;365866;365867;365868;365869 289239;289240;289241;289242;289243;289244;289245;289246;289247;289248;289249;289250;289251 289242 13 RFVSEGDGGR Unmodified 1078.5156 0.51557028 2696 Q53EL6 PDCD4 Programmed cell death protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 16 1 2 1 2 1 1 2 1 1 1 1 2 10.802 10.932 2 0.0043951 9338 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 127.4 58.976 117050000 0 0 0 5242600 4960700 9192000 7588500 4263200 4751400 9236800 11353000 16449000 7763000 9306000 26946000 43712 2696 39161 365870;365871;365872;365873;365874;365875;365876;365877;365878;365879;365880;365881;365882;365883;365884;365885 289252;289253;289254;289255;289256 289254 3 RFYEQMNGPVAGASR Unmodified 1681.7995 0.79947306 1255 P29692 EEF1D Elongation factor 1-delta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 44.66 45.167 3 9.9745E-05 50034 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 66.826 54.911 105220000 0 0 0 0 0 0 0 0 0 0 14182000 15187000 6198600 34252000 35403000 43713 1255 39162 365886;365887;365888;365889;365890 289257;289258;289259 289259 3 RGAEDDRGPWR Unmodified 1313.6225 0.62249497 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 16.704 17.102 3 0.022579 16821 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 68.107 58.675 48531000 0 0 0 0 0 0 0 0 0 0 0 16504000 10976000 5233500 15817000 43714 2378 39163 365891;365892;365893;365894 289260 289260 0 RGAEGILAPQPPPPQQHQERPGAAAIGSAR Unmodified 3056.6016 0.60164696 3576 Q8WWM7 ATXN2L Ataxin-2-like protein yes yes 0 0 2 By matching By matching By matching By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 52.028 52.44 5 0.026661 58089 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 14.53 8.5641 43332000 0 0 0 0 0 0 0 4390200 0 0 4850600 8946900 5349900 3600500 16194000 43715 3576 39164 365895;365896;365897;365898;365899;365900 289261 289261 1 RGAFSSVSMSGGAGR Unmodified 1425.6783 0.67829529 77 CON__P19013;P19013 KRT4 Keratin, type II cytoskeletal 4 yes no 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 35.332 35.44 3 1.0606E-10 38942 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 82.529 33.342 + 43266000 0 0 0 0 0 0 12015000 31250000 0 0 0 0 0 0 0 43716 77 39165 365901;365902 289262;289263;289264 289264 3 RGAFSSVSMSGGAGR Oxidation (M) 1441.6732 0.67320991 77 CON__P19013;P19013 KRT4 Keratin, type II cytoskeletal 4 yes no 0 1 1 By MS/MS 10 0 1 1 21.345 21.511 3 0.00064746 22112 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 46.823 16.597 + 59178000 0 0 0 0 0 0 0 59178000 0 0 0 0 0 0 0 43717 77 39165 365903 289265 289265 109 1 RGAGMPGQHGQITQQELDTVVK Oxidation (M) 2365.1808 0.18084127 1563 P49257 LMAN1 Protein ERGIC-53 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 2 2 1 1 2 54.836 54.349 3;4 1.0418E-20 60478 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.668 81.582 210810000 107010000 0 0 0 0 0 0 0 0 0 18530000 20994000 12761000 9219700 42293000 43718 1563 39166 365904;365905;365906;365907;365908;365909;365910;365911;365912 289266;289267;289268;289269;289270;289271;289272;289273 289266 2481 7 RGAIVSEPAIQVR Unmodified 1394.7994 0.7993967 4350 Q9H1H9 KIF13A Kinesin-like protein KIF13A yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 51.73 51.492 3 0.0055739 58198 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 39.006 31.041 8368800 0 0 0 4370100 0 0 0 3998700 0 0 0 0 0 0 0 43719 4350 39167 365913;365914 289274;289275 289274 2 RGALIVLEGVDR Unmodified 1296.7514 0.75138388 1170 P23919 DTYMK Thymidylate kinase yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 68.437 68.585 3 0.0054876 77447 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.209 28.53 69309000 0 0 0 0 1487200 7914900 4117100 4746400 7348800 5608900 6620400 7598400 4765900 4773000 14328000 43720 1170 39168 365915;365916;365917;365918;365919;365920;365921;365922;365923;365924;365925 289276 289276 1 RGALQGSAWQVSSEDVR Unmodified 1844.9129 0.91292291 5211 Q9Y4W2 LAS1L Ribosomal biogenesis protein LAS1L yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 54.501 54.988 3 0.0017597 61473 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 27.7 16.661 19347000 0 0 0 0 0 0 0 0 0 0 0 5797500 0 5681300 7868100 43721 5211 39169 365926;365927;365928;365929 289277;289278;289279;289280;289281 289278 5 RGALVVEDNDSGVPVEETK Unmodified 2013.0015 0.0014631481 3950 Q96PZ0 PUS7 Pseudouridylate synthase 7 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 6.2 3.82 3 2 5 2 2 1 1 1 1 1 1 54.695 52.319 3 2.273E-06 65920 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 63.302 56.17 141680000 24417000 4418600 81503000 0 4091800 0 5879600 0 0 0 4117600 8622800 0 8632300 0 43722 3950 39170 365930;365931;365932;365933;365934;365935;365936;365937;365938;365939 289282;289283;289284;289285;289286;289287;289288;289289 289288 8 RGALVVEDNDSGVPVEETKK Unmodified 2141.0964 0.096426166 3950 Q96PZ0 PUS7 Pseudouridylate synthase 7 homolog yes yes 0 0 2 By MS/MS 2 0 1 1 49.937 46.022 3 0.0020094 58020 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 50.938 47.39 2386900 0 0 2386900 0 0 0 0 0 0 0 0 0 0 0 0 43723 3950 39171 365940 289290 289290 1 RGANQHATDEEGK Unmodified 1411.644 0.64401827 2491 Q15057 ACAP2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 yes yes 0 0 1 By MS/MS 2 0 1 1 0.33141 -2.9561 2 0.0062509 313 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.685 71.442 2760200 2760200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43724 2491 39172 365941 289291 289291 1 RGAPPSSNIEDFHGLLPK Unmodified 1934.001 0.0010096381 1473 P43243 MATR3 Matrin-3 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 5 25 4 1 3 2 2 2 2 2 2 2 2 2 2 2 72.347 71.845 3;4 1.3293E-74 82848 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 174.78 155.48 1377300000 41166000 195910 0 33053000 15492000 125730000 39348000 85217000 109060000 100150000 73807000 138770000 103640000 112420000 399230000 43725 1473 39173 365942;365943;365944;365945;365946;365947;365948;365949;365950;365951;365952;365953;365954;365955;365956;365957;365958;365959;365960;365961;365962;365963;365964;365965;365966;365967;365968;365969;365970;365971 289292;289293;289294;289295;289296;289297;289298;289299;289300;289301;289302;289303;289304;289305;289306;289307;289308;289309;289310;289311;289312;289313;289314;289315;289316;289317;289318;289319;289320;289321;289322;289323;289324;289325;289326;289327;289328 289297 30 RGDFLIVDPIEEGEK Unmodified 1715.873 0.87301516 3379 Q8N9N8 EIF1AD Probable RNA-binding protein EIF1AD yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 82.427 78.969 3 0.0010781 101314 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.209 50.452 54986000 33802000 0 8001300 0 0 0 0 0 0 0 0 0 0 0 13183000 43726 3379 39174 365972;365973;365974 289329;289330;289331;289332 289330 4 RGDIIGVQGNPGK Unmodified 1309.7102 0.71024735 2485 Q15046 KARS Lysine--tRNA ligase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 2 30.618 30.986 2;3 0.0017073 32347 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.3 30.534 49290000 0 0 0 3650000 0 0 0 0 0 0 7411300 0 0 4695300 33533000 43727 2485 39175 365975;365976;365977;365978;365979 289333;289334;289335 289333 3 RGDINLLMLGDPGTAK Unmodified 1669.8821 0.88214006 1333 P33992 MCM5 DNA replication licensing factor MCM5 yes yes 0 0 1 By MS/MS 10 0 1 1 79.018 79.264 3 0.0006837 91130 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.907 40.599 10675000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10675000 43728 1333 39176 365980 289336 289336 1 RGDLPFVVPR Unmodified 1154.656 0.65602693 1356 P35579 MYH9 Myosin-9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 2 1 2 1 1 1 1 1 1 1 1 68.494 68.537 3 0.00070503 78354 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 74.944 60.278 385270000 0 0 0 27192000 23437000 37599000 29371000 18641000 29811000 25627000 29870000 55383000 30046000 27526000 50767000 43729 1356 39177 365981;365982;365983;365984;365985;365986;365987;365988;365989;365990;365991;365992;365993;365994 289337;289338;289339;289340;289341;289342;289343;289344;289345;289346;289347;289348;289349;289350;289351;289352 289350 15 RGDSQPYQALK Unmodified 1261.6415 0.64149908 4138 Q9BTA9 WAC WW domain-containing adapter protein with coiled-coil yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.206 23.409 2 0.0021673 25175 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 60.518 28.584 139330000 0 0 0 6133800 6928700 6171700 8998700 10974000 5262300 12302000 9498300 19942000 18283000 11455000 23385000 43730 4138 39178 365995;365996;365997;365998;365999;366000;366001;366002;366003;366004;366005;366006 289353;289354;289355;289356;289357;289358;289359;289360;289361;289362;289363 289363 9 RGDTVATLSER Unmodified 1203.6208 0.62076364 1134 P22102 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 23.961 24.166 2;3 0.0017355 26005 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 59.155 44.524 381510000 0 0 0 20185000 14886000 37247000 25452000 18890000 16131000 32657000 39665000 39929000 23014000 31906000 81547000 43731 1134 39179 366007;366008;366009;366010;366011;366012;366013;366014;366015;366016;366017;366018;366019;366020;366021;366022;366023;366024;366025;366026;366027;366028;366029;366030 289364;289365;289366;289367;289368;289369;289370;289371;289372;289373 289365 3 RGDTVATLSERVK Unmodified 1430.7841 0.78414057 1134 P22102 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes yes 0 0 2 By MS/MS 2 0 1 1 43.032 36.239 3 0.0025472 49966 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.875 66.106 54245000 54245000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43732 1134 39180 366031 289374 289374 0 RGEAGWEGGYPEIVK Unmodified 1646.8053 0.80526994 2168 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.48 3.14 4 17 2 2 1 1 2 1 1 1 1 1 2 2 2 2 65.09 64.071 2;3 0.0004091 72886 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 47.64 44.695 396050000 79470000 0 63101000 7758100 5292900 27377000 6849100 9311900 9855300 22777000 19447000 26616000 28107000 28537000 61549000 43733 2168 39181 366032;366033;366034;366035;366036;366037;366038;366039;366040;366041;366042;366043;366044;366045;366046;366047;366048;366049;366050;366051;366052 289375;289376;289377;289378;289379;289380;289381;289382;289383;289384;289385;289386;289387;289388;289389;289390;289391;289392 289377 16 RGEAHLAVNDFELAR Unmodified 1696.8645 0.86451616 2080 Q02790 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 0 0 1 By matching By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 62.472 62.824 4 1.6399E-19 70536 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.541 81.05 55947000 0 0 0 0 0 0 0 0 2446300 0 3499000 5297800 0 4283800 40420000 43734 2080 39182 366053;366054;366055;366056;366057 289393 289393 1 RGEDHPAVMR Oxidation (M) 1182.5564 0.55638924 4203 Q9BW71 HIRIP3 HIRA-interacting protein 3 yes yes 0 1 1 By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching 10 0 7 1 1 1 1 1 1 1 6.4921 6.6307 3 0.038946 4788 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 46.406 32.637 45633000 0 0 0 4588000 0 3720900 1176300 0 0 0 10476000 0 9148700 7990800 8532300 43735 4203 39183 366058;366059;366060;366061;366062;366063;366064 289394 289394 0 RGEEIASSGQSPHIK Unmodified 1594.8063 0.80633258 3068 Q7RTV5 AAED1 Thioredoxin-like protein AAED1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 21.456 21.588 3 1.6498E-10 21925 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 95.755 77.889 92459000 0 0 0 8452400 6292200 0 14798000 10301000 7482100 9866800 13008000 0 13916000 8342000 0 43736 3068 39184 366065;366066;366067;366068;366069;366070;366071;366072;366073;366074 289395;289396;289397;289398;289399;289400;289401;289402;289403;289404;289405;289406 289400 11 RGEHVVCGSTR Unmodified 1256.6044 0.60440207 2829 Q5VYS8 ZCCHC6 Terminal uridylyltransferase 7 yes yes 0 0 1 By matching By matching By matching By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 6.4283 6.561 3 0.047771 3745 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 21.23 16.171 7677000 0 0 0 0 0 1522800 333420 0 0 1345100 0 1220000 1963800 0 1291900 43737 2829 39185 366075;366076;366077;366078;366079;366080 289407 289407 1 RGELDDPEPR Unmodified 1182.5629 0.56291441 150 O00418 EEF2K Eukaryotic elongation factor 2 kinase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.138 19.334 3 0.0040996 19524 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 41.689 29.976 42400000 0 0 0 2573900 2558700 2447800 2549400 2302900 1281700 4924500 5080800 5935200 4025700 3296400 5422700 43738 150 39186 366081;366082;366083;366084;366085;366086;366087;366088;366089;366090;366091;366092 289408;289409;289410;289411;289412;289413;289414;289415;289416;289417 289414 10 RGESLDNLDSPR Unmodified 1357.6586 0.65860571 3573 Q8WWI1 LMO7 LIM domain only protein 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 1 2 1 2 1 2 2 2 2 2 2 32.909 33.163 2;3 4.9031E-06 36261 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 88.101 76.568 425450000 0 0 0 25631000 19421000 24167000 25902000 38664000 22692000 40170000 49737000 51849000 38767000 35050000 53396000 43739 3573 39187 366093;366094;366095;366096;366097;366098;366099;366100;366101;366102;366103;366104;366105;366106;366107;366108;366109;366110;366111;366112 289418;289419;289420;289421;289422;289423;289424;289425;289426;289427;289428;289429;289430;289431;289432;289433 289420 16 RGETSGRVDDNEETIK Unmodified 1804.8551 0.85513326 734 P00568 AK1 Adenylate kinase isoenzyme 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.26 3.3 5 18 2 1 2 1 1 2 1 1 2 2 2 1 1 2 2 15.953 15.326 3;4 1.5198E-06 20116 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 99.566 67.291 480590000 88816000 7486500 130920000 4984800 2804300 28880000 8824000 5588200 9903600 18117000 40815000 17649000 13415000 28684000 73706000 43740 734 39188 366113;366114;366115;366116;366117;366118;366119;366120;366121;366122;366123;366124;366125;366126;366127;366128;366129;366130;366131;366132;366133;366134;366135 289434;289435;289436;289437;289438;289439;289440;289441;289442;289443;289444 289440 10 RGEYIYTGNAK Unmodified 1270.6306 0.63060004 2514 Q15291 RBBP5 Retinoblastoma-binding protein 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 24.279 24.54 2 0.0028736 25715 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 97.456 64.616 62090000 0 0 0 0 2739300 0 4415700 5125900 3209200 4665500 6064800 7569900 9734200 6987700 11578000 43741 2514 39189 366136;366137;366138;366139;366140;366141;366142;366143;366144;366145 289445;289446;289447;289448 289446 4 RGFAFVTFDDHDSVDK Unmodified 1854.8537 0.8536767 891 P09651;Q32P51 HNRNPA1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 yes no 0 0 1 By MS/MS By matching By MS/MS 3.6 3.2 4 1 3 1 1 75.958 72.795 3;4 2.3748E-24 95563 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 120.9 107.8 99371000 74743000 120440 0 0 0 0 0 0 0 0 0 0 0 0 24507000 43742 891 39190 366146;366147;366148;366149;366150 289449;289450;289451;289452 289451 4 RGFAFVTFDDHDTVDK Unmodified 1868.8693 0.86932676 1679 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 yes yes 0 0 1 By MS/MS By MS/MS 6 4 1 1 1 1 77.244 73.364 3 9.2068E-11 83859 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 97.291 86.059 32853000 15344000 0 0 0 0 0 0 0 0 0 0 0 0 0 17509000 43743 1679 39191 366151;366152 289453;289454 289453 1 RGFEGSCSQK Unmodified 1154.5139 0.51385572 360 O43719 HTATSF1 HIV Tat-specific factor 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.52 3.11 5 22 2 2 1 2 2 2 2 2 2 2 2 1 2 2 1 6.962 6.4418 2;3 0.00030573 8449 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 141.91 95.485 794870000 688170000 14689000 912420 5876100 4832500 4914200 4650100 7289400 6082600 6496700 13892000 5314000 12300000 11453000 7993200 43744 360 39192 366153;366154;366155;366156;366157;366158;366159;366160;366161;366162;366163;366164;366165;366166;366167;366168;366169;366170;366171;366172;366173;366174;366175;366176;366177;366178;366179 289455;289456;289457;289458;289459;289460;289461;289462;289463;289464;289465 289458 9 RGFEVVYMTEPIDEYCVQQLK Oxidation (M) 2619.2349 0.23491026 862 P08238 HSP90AB1 Heat shock protein HSP 90-beta yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 6.25 3.77 2 2 4 2 2 1 1 1 1 83.092 80.657 3 8.6911E-93 102031 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 165.06 158.03 580620000 518460000 7498000 0 0 0 9148100 0 0 2902400 0 0 0 0 0 42608000 43745 862 39193 366180;366181;366182;366183;366184;366185;366186;366187 289466;289467;289468;289469;289470;289471;289472;289473;289474;289475 289475 1099 9 RGFEVVYMTEPIDEYCVQQLK Unmodified 2603.24 0.23999564 862 P08238 HSP90AB1 Heat shock protein HSP 90-beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 3.29 2.81 1 3 2 1 4 1 1 1 91.626 88.764 3;4 1.5721E-107 95080 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 148.2 141.61 667650000 642260000 10068000 3477500 0 0 0 0 0 0 0 0 0 0 0 11845000 43746 862 39193 366188;366189;366190;366191;366192;366193;366194 289476;289477;289478;289479;289480;289481;289482;289483 289478 7 RGFGFVEFEDPRDADDAVYELDGK Unmodified 2746.2511 0.25108891 2259 Q13243 SRSF5 Serine/arginine-rich splicing factor 5 yes yes 0 0 2 By MS/MS 2 0 1 1 91.732 83.601 4 0.00012967 108452 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 41.491 33.869 5468300 5468300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43747 2259 39194 366195 289484 289484 1 RGFGFVTFDDHDPVDK Unmodified 1850.8588 0.85876208 1141 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 6 4 2 2 2 1 1 76.113 74.199 3 2.725E-46 96633 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 170.11 149.76 93317000 45337000 0 0 0 0 0 0 0 0 0 0 0 0 3088700 44891000 43748 1141 39195 366196;366197;366198;366199 289485;289486;289487;289488 289487 4 RGFQEVVTPNIFNSR Unmodified 1762.9115 0.91146635 1209 P26639 TARS Threonine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 77.083 77.286 3 0.0009047 88701 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.249 36.191 116890000 0 0 0 0 0 0 0 0 0 0 12179000 8973900 0 8992000 86745000 43749 1209 39196 366200;366201;366202;366203 289489;289490;289491 289489 3 RGFSANSAR Unmodified 964.48388 0.48387622 58;779 P04259;CON__P02538;P02538 KRT6B;KRT6A Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 6A no no 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 8.5268 8.6329 2 0.042489 7165 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 80.755 29.789 + 186430000 0 0 0 16164000 7941000 2318500 14311000 20614000 3744800 7291200 2256700 0 103510000 8281000 0 43750 779;58 39197 366204;366205;366206;366207;366208;366209;366210;366211;366212;366213 289492;289493 289492 2 RGFSASSAR Unmodified 937.47298 0.47297719 66 CON__P04259 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 9.0625 9.175 2 0.017457 7554 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 108.43 62.417 + 364120000 0 0 0 29163000 11519000 4973100 22037000 41212000 4716900 6672000 0 15061000 218440000 6326000 3997900 43751 66 39198 366214;366215;366216;366217;366218;366219;366220;366221;366222;366223;366224 289494;289495 289494 0 RGFVLQDTVEQLR Unmodified 1559.842 0.8419898 1779 P56192 MARS Methionine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 74.801 74.958 3 0.0011468 85820 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.136 32.183 30696000 0 0 0 0 0 4166700 0 1666600 3286700 4946000 0 0 0 0 16630000 43752 1779 39199 366225;366226;366227;366228;366229 289496;289497;289498 289497 3 RGGADVNIR Unmodified 956.51518 0.51517635 868 P08621 SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa yes yes 0 0 1 By MS/MS 10 0 1 1 13.61 14.046 2 0.014296 12666 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 106.68 37.896 86545000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 86545000 43753 868 39200 366230 289499 289499 0 RGGEASGTSDGGPPPSR Unmodified 1583.7288 0.72881054 198 O14641 DVL2 Segment polarity protein dishevelled homolog DVL-2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 7.1895 7.3063 3 0.00081367 4386 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 46.159 36.107 22808000 0 0 0 0 1686300 3847500 1670600 904850 0 3789900 0 2834800 0 3234600 4840000 43754 198 39201 366231;366232;366233;366234;366235;366236;366237;366238 289500;289501;289502;289503 289502 4 RGGEVLDSSHDDIK Unmodified 1526.7325 0.73249893 573 O76031 CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23.997 23.551 3 1.7604E-08 23335 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.771 57.051 113820000 6708700 0 6017100 6775400 5716600 6761700 8158300 7571000 6389100 6662800 6159100 17134000 8114500 8120700 13526000 43755 573 39202 366239;366240;366241;366242;366243;366244;366245;366246;366247;366248;366249;366250;366251;366252 289504;289505;289506;289507;289508;289509;289510;289511;289512;289513;289514;289515;289516;289517;289518 289507 15 RGGGGTELGPPAPPRPR Unmodified 1670.8965 0.89648499 3047 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 35.451 35.633 3;4 1.4396E-07 38455 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 89.506 77.893 607270000 0 0 0 29033000 31148000 57328000 36209000 31438000 33611000 49955000 51263000 69451000 83538000 54484000 79814000 43756 3047 39203 366253;366254;366255;366256;366257;366258;366259;366260;366261;366262;366263;366264;366265;366266;366267;366268;366269;366270;366271;366272;366273;366274;366275;366276 289519;289520;289521;289522;289523;289524;289525;289526;289527;289528;289529;289530;289531;289532;289533;289534;289535;289536;289537;289538;289539;289540;289541 289534 14 RGGNRFEPYANPTK Unmodified 1605.8012 0.80118762 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 25 2 2 1 2 3 2 2 2 2 2 2 3 28.615 28.832 3;4 0.0030729 32236 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 74.853 56.838 2469200000 0 0 0 55159000 35350000 101320000 113620000 141280000 124380000 288360000 256940000 452180000 247390000 173680000 479530000 43757 1681 39204 366277;366278;366279;366280;366281;366282;366283;366284;366285;366286;366287;366288;366289;366290;366291;366292;366293;366294;366295;366296;366297;366298;366299;366300;366301 289542;289543;289544;289545;289546;289547;289548;289549;289550;289551;289552;289553;289554;289555;289556;289557;289558;289559;289560;289561;289562;289563;289564 289563 10 RGGPNYQEGLR Unmodified 1245.6214 0.62143234 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 27 2 2 3 2 3 3 2 3 2 1 2 2 22.209 22.408 2;3 7.3952E-73 23243 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 179.42 128.81 9710600000 0 0 0 295110000 542590000 553480000 1352700000 2476900000 1569900000 702600000 582810000 1377200000 30974000 62050000 164300000 43758 1714 39205 366302;366303;366304;366305;366306;366307;366308;366309;366310;366311;366312;366313;366314;366315;366316;366317;366318;366319;366320;366321;366322;366323;366324;366325;366326;366327;366328 289565;289566;289567;289568;289569;289570;289571;289572;289573;289574;289575;289576;289577;289578;289579;289580;289581;289582;289583;289584 289576 15 RGGSGSHNWGTVK Unmodified 1341.6538 0.6537951 3405 Q8NC51 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 1 1 1 1 2 1 2 2 2 2 11.246 11.443 2;3 3.5843E-05 9509 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 84.753 63.896 512430000 0 0 0 8625100 0 24898000 17096000 17789000 19223000 30233000 1036500 120780000 73188000 56139000 143430000 43759 3405 39206 366329;366330;366331;366332;366333;366334;366335;366336;366337;366338;366339;366340;366341;366342;366343;366344 289585;289586;289587;289588;289589;289590;289591;289592;289593;289594;289595 289594 9 RGGSSDDRQIVDTPPHVAAGLK Unmodified 2275.1669 0.16690577 3874 Q96I25 RBM17 Splicing factor 45 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 50.557 48.317 4 9.7725E-07 52364 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.672 46.177 42217000 13842000 0 0 0 0 0 0 0 0 0 0 9419700 0 0 18956000 43760 3874 39207 366345;366346;366347 289596;289597;289598 289597 3 RGHTASESDEQQWPEEK Unmodified 2012.8824 0.88241064 4633 Q9NTI5 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes yes 0 0 1 By MS/MS 2 0 1 1 28.517 22.998 3 3.3008E-26 32449 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 120.9 115.34 9111600 9111600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43761 4633 39208 366348 289599;289600;289601 289600 3 RGHVFEESQVAGTPMFVVK Oxidation (M) 2133.0677 0.067708995 980 P13639 EEF2 Elongation factor 2 yes yes 0 1 1 By MS/MS By MS/MS 10 0 2 1 1 65.525 66.016 4 0.00013813 74590 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.045 46.335 59555000 0 0 0 0 0 0 0 0 0 0 0 8240100 0 0 51315000 43762 980 39209 366349;366350 289602 289602 1307 1 RGINGSEGDGAEIAEK Unmodified 1601.7645 0.76452734 3493 Q8TCX1 DYNC2LI1 Cytoplasmic dynein 2 light intermediate chain 1 yes yes 0 0 1 By MS/MS 2 0 1 1 28.481 25.374 3 0.026256 32106 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 24.041 12.782 4990100 0 0 4990100 0 0 0 0 0 0 0 0 0 0 0 0 43763 3493 39210 366351 289603 289603 1 RGIPNYEFK Unmodified 1122.5822 0.58219329 3681 Q92890 UFD1L Ubiquitin fusion degradation protein 1 homolog yes yes 0 0 1 By MS/MS 2 0 1 1 54.767 46.658 2 0.02594 64178 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.114 60.318 109820000 109820000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43764 3681 39211 366352 289604 289604 1 RGIPSTSVPTLESAAAITTK Unmodified 1999.095 0.094969603 3290 Q8IZ21 PHACTR4 Phosphatase and actin regulator 4 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 75.119 75.296 3 0.00023158 86405 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 34.819 26.219 37127000 0 0 0 0 0 0 5315100 3356900 0 4400600 4232300 4399200 2566400 3062700 9794200 43765 3290 39212 366353;366354;366355;366356;366357;366358;366359;366360 289605;289606;289607;289608;289609 289606 5 RGISSSNEGVEEPSK Unmodified 1574.7536 0.7536283 4733 Q9NXV6 CDKN2AIP CDKN2A-interacting protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.12 3 13 1 2 1 1 1 1 1 1 1 1 1 2 2 20.12 19.638 2;3 1.2863E-09 19049 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 114.82 98.563 438790000 16894000 0 48662000 24399000 24987000 33132000 28464000 22283000 28076000 35680000 40409000 37577000 0 35317000 62907000 43766 4733 39213 366361;366362;366363;366364;366365;366366;366367;366368;366369;366370;366371;366372;366373;366374;366375;366376 289610;289611;289612;289613;289614;289615;289616;289617;289618;289619 289612 6 RGISSSNEGVEEPSKK Unmodified 1702.8486 0.84859132 4733 Q9NXV6 CDKN2AIP CDKN2A-interacting protein yes yes 0 0 2 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 2 1 1 14.04 14.206 3 7.0746E-14 13159 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 100.23 81.405 49146000 0 0 0 3613700 5178500 1306900 2957500 2729600 1092500 4131500 5665300 6025000 6608200 3559200 6277700 43767 4733 39214 366377;366378;366379;366380;366381;366382;366383;366384;366385;366386;366387;366388;366389 289620;289621;289622;289623;289624;289625;289626;289627;289628;289629 289622 10 RGITNTLEESSSLK Unmodified 1533.7999 0.79985021 1238 P28715 ERCC5 DNA repair protein complementing XP-G cells yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 6 4 2 2 2 1 1 56.054 47.907 2;3 0.00090273 65525 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.417 57.861 124580000 124580000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43768 1238 39215 366390;366391;366392;366393 289630;289631;289632;289633 289632 3 RGLALALFGGEPK Unmodified 1327.7612 0.76122028 1590 P49736 MCM2 DNA replication licensing factor MCM2 yes yes 0 0 1 By MS/MS By matching By MS/MS 10 0 3 1 1 1 78.925 79.07 3 0.0013745 90847 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.897 41.364 20362000 0 0 0 0 0 3434700 0 1469000 0 0 0 0 0 0 15458000 43769 1590 39216 366394;366395;366396 289634;289635 289635 2 RGLAVNMVDSK Oxidation (M) 1204.6234 0.62340617 4655;5016 Q9NUU7;Q9UMR2 DDX19A;DDX19B ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX19B no no 0 1 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7 3.87 3 5 3 1 1 1 1 1 26.019 23.882 2;3 0.001647 34143 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.536 56.322 277310000 235450000 0 0 0 5942400 11351000 9750800 10300000 4522400 0 0 0 0 0 0 43770 4655;5016 39217 366397;366398;366399;366400;366401;366402;366403;366404 289636;289637;289638;289639;289640;289641;289642 289638 6072 5 RGLAVNMVDSK Unmodified 1188.6285 0.62849155 4655;5016 Q9NUU7;Q9UMR2 DDX19A;DDX19B ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX19B no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 2 24 2 2 2 2 2 2 2 2 2 2 2 2 2 40.294 39.857 2;3 4.5426E-13 43884 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 144.65 114.4 887630000 224180000 0 0 25198000 17448000 61030000 34864000 34665000 28313000 68653000 63728000 87413000 48205000 51326000 142600000 43771 4655;5016 39217 366405;366406;366407;366408;366409;366410;366411;366412;366413;366414;366415;366416;366417;366418;366419;366420;366421;366422;366423;366424;366425;366426;366427;366428;366429;366430 289643;289644;289645;289646;289647;289648;289649;289650;289651;289652;289653;289654;289655;289656;289657;289658;289659;289660;289661;289662;289663 289654 7 RGLDDDRGPR Unmodified 1155.5745 0.57448215 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 2 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 8.8179 8.8228 3 0.019339 7452 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 82.171 48.21 59072000 0 0 0 11973000 14890000 12558000 10434000 8812400 0 404910 0 0 0 0 0 43772 2378 39218 366431;366432;366433;366434;366435;366436 289664;289665;289666 289665 0 RGLGAGAGAGEESPATSLPR Unmodified 1852.9391 0.93913766 262 O15173 PGRMC2 Membrane-associated progesterone receptor component 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.96 47.125 3 4.0251E-10 53052 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 54.008 44.428 97268000 0 0 0 6566900 6667700 5382900 6354200 6926800 4843300 11095000 8222000 12409000 11076000 9033500 8690700 43773 262 39219 366437;366438;366439;366440;366441;366442;366443;366444;366445;366446;366447;366448 289667;289668;289669;289670;289671;289672;289673;289674;289675;289676;289677;289678;289679;289680 289673 14 RGLGAPLTEDQQNR Unmodified 1553.791 0.79101686 4363 Q9H2D6 TRIOBP TRIO and F-actin-binding protein yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching 10 0 8 1 1 1 1 1 1 1 1 34.428 34.658 3 0.035144 38609 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 24.191 11.21 32844000 0 0 0 0 1981200 0 0 3123500 2322000 4639900 6738400 0 4054700 3745000 6239500 43774 4363 39220 366449;366450;366451;366452;366453;366454;366455;366456 289681 289681 1 RGLNSQSSDDHLNK Unmodified 1569.7495 0.74954598 35 A8CG34;Q96HA1 POM121C;POM121 Nuclear envelope pore membrane protein POM 121C;Nuclear envelope pore membrane protein POM 121 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 2 1 1 1 1 9.7543 10.016 3 0.00014956 6734 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 62.287 51.643 29765000 0 0 0 0 0 0 0 0 0 4701500 5244700 7860000 5115500 0 6843600 43775 35 39221 366457;366458;366459;366460;366461;366462 289682;289683;289684;289685;289686 289684 5 RGLNVDQLNMLGEK Unmodified 1585.8246 0.82462518 1448 P42224 STAT1 Signal transducer and activator of transcription 1-alpha/beta yes yes 0 0 1 By MS/MS 2 0 1 1 79.527 71.397 3 2.8832E-12 93774 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 114.64 96.045 53674000 53674000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43776 1448 39222 366463 289687 289687 0 RGLQTEAQVEK Unmodified 1257.6677 0.66771383 4812 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 2 22 1 1 2 2 2 2 2 2 2 2 1 2 2 1 18.644 18.462 2;3 0.0036991 26974 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.509 35.656 105520000 30516000 0 4801400 4825800 5039800 5578000 3897800 6553900 3566000 9334300 6925000 5613100 6941300 4877300 7052700 43777 4812 39223 366464;366465;366466;366467;366468;366469;366470;366471;366472;366473;366474;366475;366476;366477;366478;366479;366480;366481;366482;366483;366484;366485;366486;366487 289688;289689;289690;289691;289692;289693;289694;289695 289690 5 RGLSIEQLTTLAEK Unmodified 1557.8726 0.87262123 1419 P40763 STAT3 Signal transducer and activator of transcription 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 81.855 79.906 2;3 0.0013272 103074 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.128 44.397 45758000 26528000 0 0 0 0 6195300 0 0 0 8200000 0 0 0 0 4835200 43778 1419 39224 366488;366489;366490;366491 289696;289697;289698;289699 289699 3 RGLSVDSAQEVK Unmodified 1287.6783 0.67827852 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.04 2.6 3 22 1 2 1 2 2 2 2 2 2 2 2 2 2 1 30.585 30.232 2;3 0.0025016 32646 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 49.732 41.245 206800000 1797800 0 9686900 7264400 12516000 21171000 16380000 13133000 12860000 19615000 18788000 19464000 24190000 23205000 6730000 43779 5189 39225 366492;366493;366494;366495;366496;366497;366498;366499;366500;366501;366502;366503;366504;366505;366506;366507;366508;366509;366510;366511;366512;366513;366514;366515;366516 289700;289701;289702;289703;289704;289705;289706;289707;289708;289709 289702 9 RGLVGIEFK Unmodified 1017.5971 0.59711507 1029 P15924 DSP Desmoplakin yes yes 0 0 1 By MS/MS By matching By matching By matching 10 0 4 1 1 1 1 61.196 61.228 2 0.041845 70633 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 83.206 43.103 39471000 0 0 0 30654000 0 0 0 6242100 0 1099700 0 1475000 0 0 0 43780 1029 39226 366517;366518;366519;366520 289710;289711 289710 2 RGMDDDRGPR Unmodified 1173.5309 0.53090277 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 1 1 2 6.3246 6.4649 3 0.007623 4643 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 101.93 69.405 325690000 0 0 0 18310000 12755000 16411000 16812000 17259000 26020000 24619000 44887000 45038000 27008000 22445000 54130000 43781 2378 39227 366521;366522;366523;366524;366525;366526;366527;366528;366529;366530;366531;366532;366533 289712;289713;289714;289715;289716 289714 4 RGMIPVPYVEK Oxidation (M) 1303.6958 0.69584284 1499 P46108 CRK Adapter molecule crk yes yes 0 1 1 By MS/MS 2 0 1 1 64.691 56.412 2 0.020356 75987 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.677 40.202 6470600 6470600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43782 1499 39228 366534 289717;289718 289717 2368 2 RGMIPVPYVEK Unmodified 1287.7009 0.70092821 1499 P46108 CRK Adapter molecule crk yes yes 0 0 1 By MS/MS 2 0 1 1 76.628 68.498 2 0.025157 90310 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.233 33.929 14421000 14421000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43783 1499 39228 366535 289719 289719 0 RGMLSSSTSGAISDK Oxidation (M) 1511.725 0.72497071 1739 P54278 PMS2 Mismatch repair endonuclease PMS2 yes yes 0 1 1 By MS/MS By MS/MS 10 0 2 1 1 20.02 20.171 3 0.00032972 20849 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 53.565 39.555 9715000 0 0 0 0 0 0 6308400 0 0 0 0 0 3406700 0 0 43784 1739 39229 366536;366537 289720;289721 289720 2818 1 RGMLSSSTSGAISDK Unmodified 1495.7301 0.73005609 1739 P54278 PMS2 Mismatch repair endonuclease PMS2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 2 1 1 2 32.396 32.027 2;3 0.00040015 34934 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 43.37 35.837 72590000 17220000 0 0 0 0 0 0 6387700 0 0 0 17557000 7953300 7799200 15673000 43785 1739 39229 366538;366539;366540;366541;366542;366543;366544;366545;366546;366547;366548 289722;289723;289724;289725;289726;289727;289728;289729;289730;289731;289732 289728 11 RGMQLEDLK Oxidation (M) 1104.5597 0.55974328 5288 Q9Y6K9 IKBKG NF-kappa-B essential modulator yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 28.456 24.118 2 0.030469 34372 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.43 45.9 62322000 57341000 0 4980900 0 0 0 0 0 0 0 0 0 0 0 0 43786 5288 39230 366549;366550 289733 289733 1 RGMQLEDLK Unmodified 1088.5648 0.56482866 5288 Q9Y6K9 IKBKG NF-kappa-B essential modulator yes yes 0 0 1 By MS/MS 2 0 1 1 50.096 42.196 2 0.0063723 58347 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 129.38 65.12 95757000 95757000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43787 5288 39230 366551 289734 289734 0 RGNIQEIQTR Unmodified 1213.6527 0.65273247 3724 Q969S9 GFM2 Ribosome-releasing factor 2, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 14.33 14.467 3 0.032033 13441 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 24.089 4.9575 48055000 0 0 0 3811800 2535400 3119700 3890600 4538700 3256600 4859700 5247300 0 4909300 4055400 7830600 43788 3724 39231 366552;366553;366554;366555;366556;366557;366558;366559;366560;366561;366562 289735 289735 1 RGPAEESSSWR Unmodified 1260.5847 0.58471248 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 1 By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.355 19.552 3 0.0052199 18589 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 34.768 23.939 74266000 0 0 0 3816700 3653700 4337500 4947500 4798700 3271500 7057200 6461600 11398000 6444600 6181700 11898000 43789 2378 39232 366563;366564;366565;366566;366567;366568;366569;366570;366571;366572;366573;366574 289736;289737 289736 2 RGPALLHIDR Unmodified 1146.6622 0.66217494 2097;913 Q03468;P0DP91 ERCC6 DNA excision repair protein ERCC-6 no no 0 0 1 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 41.881 41.984 3 0.013808 46724 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 39.148 2.814 71261000 0 0 0 6222500 2500800 9858800 7896400 8449100 10407000 4542900 6055300 0 0 9689600 5638400 43790 2097;913 39233 366575;366576;366577;366578;366579;366580;366581;366582;366583;366584 289738;289739;289740 289740 3 RGPAPQDQAGPGGAPR Unmodified 1530.7651 0.76513646 711 O96005 CLPTM1 Cleft lip and palate transmembrane protein 1 yes yes 0 0 1 By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 17.392 17.531 3 0.0016614 17735 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 42.242 35.805 28758000 0 0 0 4097200 2270200 2433800 2587600 2835500 1733300 2752700 0 3781000 3153100 0 3113100 43791 711 39234 366585;366586;366587;366588;366589;366590;366591;366592;366593;366594;366595 289741;289742;289743;289744;289745;289746;289747 289742 7 RGPCIIYNEDNGIIK Unmodified 1760.888 0.88795372 1377 P36578 RPL4 60S ribosomal protein L4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 63.806 63.969 3 4.8099E-05 72251 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.3 41.532 99229000 0 0 0 0 4234300 5802400 5358800 4399800 5636900 8838900 10932000 11995000 12765000 14609000 14658000 43792 1377 39235 366596;366597;366598;366599;366600;366601;366602;366603;366604;366605;366606 289748;289749;289750;289751;289752;289753;289754;289755;289756;289757;289758;289759;289760 289750 13 RGPEEDRFSR Unmodified 1247.6007 0.6006969 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 2 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 12.689 12.878 3 0.010937 12110 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 109.24 76.007 161210000 0 0 0 0 0 27745000 19966000 12102000 22130000 25042000 16267000 37953000 0 0 0 43793 2378 39236 366607;366608;366609;366610;366611;366612;366613 289761;289762;289763;289764 289761 0 RGPEVTSQGVQTSSPACK Unmodified 1887.9109 0.910874 4047 Q99700 ATXN2 Ataxin-2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 28.471 27.962 3 1.5963E-10 38164 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.564 63.921 182170000 55586000 0 8134400 0 7346100 8799200 7970000 10069000 9790500 9882900 14094000 15951000 10448000 10504000 13598000 43794 4047 39237 366614;366615;366616;366617;366618;366619;366620;366621;366622;366623;366624;366625;366626 289765;289766;289767;289768;289769;289770;289771;289772;289773;289774;289775;289776;289777;289778;289779;289780;289781;289782;289783 289773 19 RGPGLYYVDSEGNR Unmodified 1581.7536 0.75356872 1231 P28074 PSMB5 Proteasome subunit beta type-5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 2 1 1 2 45.485 45.745 2;3 0.00011642 51182 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 54.598 49.46 325550000 0 0 0 14320000 4310100 9601400 4403100 11661000 0 9252400 36236000 49645000 10600000 36525000 138990000 43795 1231 39238 366627;366628;366629;366630;366631;366632;366633;366634;366635;366636;366637;366638;366639 289784;289785;289786;289787;289788;289789;289790;289791;289792;289793 289787 10 RGPLAGLGPGSTPR Unmodified 1334.7419 0.74188183 3548 Q8WUM0 NUP133 Nuclear pore complex protein Nup133 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 46.173 46.376 3 0.0048486 52084 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 29.733 22.686 79070000 0 0 0 9921500 0 12845000 5833500 0 0 11670000 0 17639000 0 7414300 13747000 43796 3548 39239 366640;366641;366642;366643;366644;366645;366646 289794;289795;289796;289797;289798;289799 289795 6 RGPPGLEDTTSK Unmodified 1256.6361 0.63607935 611 O94966 USP19 Ubiquitin carboxyl-terminal hydrolase 19 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching 10 0 5 1 1 1 1 1 21.763 22.019 3 0.023309 23119 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 20.271 7.6553 27492000 0 0 0 0 0 5275400 0 0 3504000 5660400 0 7771000 5280900 0 0 43797 611 39240 366647;366648;366649;366650;366651 289800 289800 1 RGPPPPPTASEPTR Unmodified 1458.7579 0.75792582 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 0 1 By matching By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 24.542 24.806 3 0.00056543 25569 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.621 32.907 31279000 0 0 0 4641400 0 0 0 0 0 4705500 0 0 8164800 4506700 9260600 43798 213 39241 366652;366653;366654;366655;366656 289801;289802 289801 2 RGPPPPPTASEPTRR Unmodified 1614.859 0.85903685 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 1 2 2 2 3 2 2 2 20.638 20.861 3;4 3.8973E-37 21819 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 128.9 118.17 431600000 0 0 0 25163000 32750000 30843000 37002000 13801000 25855000 43397000 27219000 66082000 50491000 41088000 37904000 43799 213 39242 366657;366658;366659;366660;366661;366662;366663;366664;366665;366666;366667;366668;366669;366670;366671;366672;366673;366674;366675;366676;366677;366678;366679;366680 289803;289804;289805;289806;289807;289808;289809;289810;289811 289809 4 RGPPSDGHEALEK Unmodified 1391.6793 0.67934115 4363 Q9H2D6 TRIOBP TRIO and F-actin-binding protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 12.947 13.129 3 0.00096727 12009 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.885 35.152 70772000 0 0 0 0 4507400 5507700 5374300 4247600 3844800 10997000 5654300 10854000 7430300 4470300 7884500 43800 4363 39243 366681;366682;366683;366684;366685;366686;366687;366688;366689;366690;366691 289812;289813;289814;289815;289816;289817;289818;289819;289820;289821;289822;289823 289822 11 RGPPTYNEHITK Unmodified 1411.7208 0.72081203 189 O14578 CIT Citron Rho-interacting kinase yes yes 0 0 1 By MS/MS 2 0 1 1 28.834 23.316 3 0.0030486 32862 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.5 42.988 55471000 55471000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43801 189 39244 366692 289824;289825 289825 2 RGPQLVCTGSDDGTVK Unmodified 1688.8152 0.8151827 3798 Q96DI7 SNRNP40 U5 small nuclear ribonucleoprotein 40 kDa protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 33.75 34.229 3 0.00025666 36479 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.973 45.915 49123000 0 0 0 0 0 0 0 7986600 0 0 10463000 8003300 0 8574900 14096000 43802 3798 39245 366693;366694;366695;366696;366697 289826;289827;289828;289829 289826 4 RGPSEETGGAVFDHPAK Unmodified 1753.8384 0.83836099 412 O60563 CCNT1 Cyclin-T1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 4 22 2 2 2 2 2 2 2 2 2 2 1 2 2 1 30.686 30.055 3;4 2.1325E-80 43586 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 188.85 186.91 819050000 280650000 0 14420000 28128000 20486000 30122000 31686000 34934000 35169000 35820000 42311000 66983000 71426000 66228000 60693000 43803 412 39246 366698;366699;366700;366701;366702;366703;366704;366705;366706;366707;366708;366709;366710;366711;366712;366713;366714;366715;366716;366717;366718;366719;366720;366721;366722;366723 289830;289831;289832;289833;289834;289835;289836;289837;289838;289839;289840;289841;289842;289843;289844;289845;289846;289847;289848;289849;289850;289851;289852;289853;289854;289855;289856;289857;289858;289859 289842 25 RGPSFMTSPSPK Unmodified 1290.6391 0.63905624 4492 Q9HAW4 CLSPN Claspin yes yes 0 0 1 By MS/MS 10 0 1 1 25.99 26.468 3 0.040763 28571 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 20.096 5.8386 30379000 0 0 0 0 0 0 0 0 0 0 30379000 0 0 0 0 43804 4492 39247 366724 289860 289860 1 RGPVESDPLRGEPGSAR Unmodified 1778.9024 0.90235823 1606 P49842 STK19 Serine/threonine-protein kinase 19 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 33.327 33.404 3 0.040229 36361 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 32.387 20.182 53615000 0 0 0 3051500 3542900 7337500 4803100 4349500 4878400 7009700 8688500 0 4780300 5174000 0 43805 1606 39248 366725;366726;366727;366728;366729;366730;366731;366732;366733;366734 289861 289861 1 RGQPASPSAHMVSHSHSPSVVS Unmodified 2241.0709 0.070896892 2371 Q14135 VGLL4 Transcription cofactor vestigial-like protein 4 yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 29.44 29.946 4 0.0052083 31143 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 22.996 13.037 14151000 0 0 0 0 0 0 0 0 0 0 0 0 0 5110900 9040000 43806 2371 39249 366735;366736 289862 289862 1 RGQQQRPLEAQPSAPGHSVK Unmodified 2170.1355 0.13554606 4995 Q9ULH7 MKL2 MKL/myocardin-like protein 2 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 21.355 21.571 4 6.5614E-05 21975 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 36.253 33.584 146550000 0 0 0 0 5247700 18387000 16341000 15979000 10226000 15464000 18044000 19518000 0 0 27345000 43807 4995 39250 366737;366738;366739;366740;366741;366742;366743;366744;366745 289863;289864;289865;289866;289867;289868;289869;289870;289871;289872 289869 9 RGQTCVVHYTGMLEDGK Oxidation (M) 1965.9037 0.90368013 1932 P62942 FKBP1A Peptidyl-prolyl cis-trans isomerase FKBP1A yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 6 4 2 2 2 1 1 42.919 39.363 3;4 8.5703E-47 55632 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 136.39 128.68 156050000 138200000 0 0 0 0 0 0 0 0 0 7778800 0 0 0 10068000 43808 1932 39251 366746;366747;366748;366749 289873;289874;289875;289876;289877;289878 289877 3112 6 RGQTCVVHYTGMLEDGK Unmodified 1949.9088 0.90876551 1932 P62942 FKBP1A Peptidyl-prolyl cis-trans isomerase FKBP1A yes yes 0 0 1 By MS/MS By MS/MS 4 3.46 3 1 3 1 57.268 51.277 3;4 5.557E-07 54871 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.975 75.765 128530000 102030000 0 0 0 0 0 0 0 0 0 0 0 0 0 26507000 43809 1932 39251 366750;366751;366752;366753 289879;289880;289881;289882;289883;289884;289885 289880 7 RGRSTDSEVSQSPAK Unmodified 1603.7914 0.79141079 470 O75175 CNOT3 CCR4-NOT transcription complex subunit 3 yes yes 0 0 2 By MS/MS 2 0 1 1 8.4679 4.8292 3 0.0026558 8366 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.566 64.34 25095000 25095000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43810 470 39252 366754 289886 289886 1 RGSDELFSTCVTNGPFIMSSNSASAANGNDSK Oxidation (M) 3336.4623 0.46229702 1208 P26599 PTBP1 Polypyrimidine tract-binding protein 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 78.229 77.028 3 1.9613E-113 89126 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 125.71 120.98 77597000 14732000 0 0 0 0 0 0 0 4192900 11802000 8879200 10362000 0 0 27627000 43811 1208 39253 366755;366756;366757;366758;366759;366760 289887;289888;289889;289890;289891;289892;289893;289894 289889 1766 8 RGSDELFSTCVTNGPFIMSSNSASAANGNDSK Unmodified 3320.4674 0.4673824 1208 P26599 PTBP1 Polypyrimidine tract-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS 6 4 1 1 1 1 83.978 80.021 3 1.3996E-72 94051 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 105.98 103.53 35660000 22477000 0 0 0 0 0 0 0 0 0 0 0 0 0 13183000 43812 1208 39253 366761;366762 289895;289896 289895 2 RGSLPDTQPSQGPSTPK Unmodified 1751.8802 0.8802258 3205 Q86Y91 KIF18B Kinesin-like protein KIF18B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 29.701 29.685 3 0.0033177 32466 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 29.099 16.606 7492100 0 0 0 0 1478500 0 2850000 0 0 0 0 0 0 3163500 0 43813 3205 39254 366763;366764;366765;366766 289897;289898;289899 289899 2 RGTEDRSDQSSLK Unmodified 1477.7121 0.71209784 4421 Q9H6S0 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 yes yes 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 6.7401 3.8741 3 0.0057266 6796 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.614 50.273 46356000 31750000 0 14606000 0 0 0 0 0 0 0 0 0 0 0 0 43814 4421 39255 366767;366768 289900 289900 1 RGTGGVDTAAVGGVFDVSNADR Unmodified 2120.0247 0.024658206 967 P12277 CKB Creatine kinase B-type yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 70.296 70.603 3 3.508E-10 80470 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.83 35.928 43911000 0 0 0 0 0 0 0 0 0 0 6742200 5304300 0 5046800 26818000 43815 967 39256 366769;366770;366771;366772 289901;289902;289903;289904 289901 4 RGTLSGAPAPPTR Unmodified 1279.6997 0.69968266 4199 Q9BW19 KIFC1 Kinesin-like protein KIFC1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 28.57 28.668 3 0.015361 31320 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 30.961 14.33 62341000 0 0 0 4675100 4736000 0 5378300 0 3717800 11648000 12748000 0 12516000 6921500 0 43816 4199 39257 366773;366774;366775;366776;366777;366778;366779;366780 289905;289906 289905 2 RGTQLEESSK Unmodified 1133.5677 0.56766543 3025 Q70E73 RAPH1 Ras-associated and pleckstrin homology domains-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 4 1 1 2 7.4053 4.6046 2 4.0105E-08 6430 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 157.66 77.434 157310000 94001000 24093000 39213000 0 0 0 0 0 0 0 0 0 0 0 0 43817 3025 39258 366781;366782;366783;366784 289907;289908;289909 289909 3 RGTSPRPPEGGLGYSQLGDDDLK Unmodified 2414.1826 0.18261541 1118;5069 P21127;Q9UQ88 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A no no 0 0 2 By MS/MS 2 0 2 2 67.786 59.492 3;4 0.00010877 79603 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.703 51.014 35050000 35050000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43818 1118;5069 39259 366785;366786 289910;289911;289912 289911 2 RGVACTQPR Unmodified 1043.5294 0.52944621 295 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.6585 6.7827 2 0.041474 4170 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.615 44.512 46097000 0 0 0 2315200 2632000 3120500 2433500 3001500 2900600 3298900 5066900 4420500 4666400 3964600 8276200 43819 295 39260 366787;366788;366789;366790;366791;366792;366793;366794;366795;366796;366797;366798 289913;289914 289913 2 RGVDYNAEIPFEK Unmodified 1536.7573 0.75725712 4010 Q99459 CDC5L Cell division cycle 5-like protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 65.038 63.943 3 3.301E-07 72730 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 77.527 62.139 137020000 21723000 0 15923000 0 5060900 11593000 9207200 8021200 9400300 19393000 12095000 0 0 0 24604000 43820 4010 39261 366799;366800;366801;366802;366803;366804;366805;366806;366807;366808 289915;289916;289917;289918;289919;289920;289921;289922;289923;289924;289925 289917 11 RGVFNVQMEPK Unmodified 1303.6707 0.67069072 804 P05198 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 52.202 51.707 3 0.00013576 57653 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 68.536 54.506 287700000 40455000 0 0 13587000 0 19925000 14034000 13000000 9445700 14760000 27337000 29829000 16673000 32961000 55697000 43821 804 39262 366809;366810;366811;366812;366813;366814;366815;366816;366817;366818;366819;366820 289926;289927;289928;289929;289930;289931;289932;289933;289934;289935;289936;289937;289938;289939;289940;289941 289937 14 RGVFNVQMEPK Oxidation (M) 1319.6656 0.66560534 804 P05198 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 35.777 36.087 3 0.003126 38831 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 47.154 40.298 45209000 0 0 0 0 0 11084000 0 0 0 7247800 0 13641000 13236000 0 0 43822 804 39262 366821;366822;366823;366824;366825 289942;289943 289943 966 2 RGVITDQNSDGYCQTGTMSR Oxidation (M) 2260.9801 0.98009255 1029 P15924 DSP Desmoplakin yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 30.168 30.349 3 6.8693E-48 32750 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 116.43 113.04 152380000 0 0 0 41345000 9032100 9494700 9864600 0 6716500 13655000 15181000 19938000 17205000 0 9953500 43823 1029 39263 366826;366827;366828;366829;366830;366831;366832;366833;366834;366835;366836 289944;289945;289946;289947;289948;289949;289950;289951;289952;289953;289954 289951 1433 11 RGVITDQNSDGYCQTGTMSR Unmodified 2244.9852 0.98517793 1029 P15924 DSP Desmoplakin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 37.436 37.62 3 1.3467E-53 42066 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 121.47 116.67 118730000 0 0 0 42835000 6861300 7408700 5204200 6552100 0 7973500 6430800 11103000 9528600 4793700 10042000 43824 1029 39263 366837;366838;366839;366840;366841;366842;366843;366844;366845;366846;366847 289955;289956;289957;289958;289959;289960;289961;289962;289963;289964;289965;289966;289967;289968 289967 14 RGVSCQFGPDVTK Unmodified 1449.7034 0.70344741 1709 P53041 PPP5C Serine/threonine-protein phosphatase 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 8 3.46 3 9 1 1 1 1 1 1 1 1 1 1 1 1 39.251 38.131 3 0.00027477 40876 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.966 37.076 1212600000 1061400000 10089000 9397200 4564000 0 5689100 4865100 0 6703000 0 26860000 20968000 9927400 13608000 38549000 43825 1709 39264 366848;366849;366850;366851;366852;366853;366854;366855;366856;366857;366858;366859 289969;289970;289971;289972 289969 3 RGYFNEELSEILSDPSDDTK Unmodified 2314.0601 0.060100239 1029 P15924 DSP Desmoplakin yes yes 0 0 1 By MS/MS 2 0 1 1 91.187 83.056 3 1.1354E-09 107836 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.748 71.658 16002000 16002000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43826 1029 39265 366860 289973 289973 1 RHAPIEQLAR Unmodified 1189.668 0.6679886 1597 P49757 NUMB Protein numb homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 26.701 26.766 3 0.0023787 28694 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 50.452 32.227 73173000 0 0 0 5402500 5655800 8744200 5339300 8423600 10684000 7990700 0 0 0 0 20934000 43827 1597 39266 366861;366862;366863;366864;366865;366866;366867;366868 289974;289975;289976;289977;289978;289979 289974 5 RHAPSPEPAVQGTGVAGVPEESGDAAAIPAK Unmodified 2965.4894 0.48936212 975 P13051 UNG Uracil-DNA glycosylase yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 65.639 59.612 4 1.4707E-90 79477 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 128.71 117.19 315140000 294480000 0 20659000 0 0 0 0 0 0 0 0 0 0 0 0 43828 975 39267 366869;366870 289980;289981;289982;289983;289984 289981 5 RHEQFIPIAADK Unmodified 1423.7572 0.75719754 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 46.143 46.55 3 0.042467 52696 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 24.929 6.1007 32419000 0 0 0 0 0 3675800 0 0 2817700 0 0 11085000 4216300 0 10624000 43829 5216 39268 366871;366872;366873;366874;366875 289985 289985 1 RHGAEVIDTPVFELK Unmodified 1709.9101 0.91006937 961 P12081 HARS Histidine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 80.345 74.38 3 0.00024393 96551 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.416 54.861 38497000 38497000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43830 961 39269 366876;366877 289986;289987 289987 1 RHLSEGTNSYATR Unmodified 1490.7226 0.72260295 2376 Q14149 MORC3 MORC family CW-type zinc finger protein 3 yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By matching 10 0 5 1 1 1 1 1 13.114 13.258 3 0.0066467 12576 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 37.613 32.812 8891300 0 0 0 0 0 1354200 0 1365800 0 3677200 0 0 1472800 1021300 0 43831 2376 39270 366878;366879;366880;366881;366882 289988 289988 1 RHLTGEFEK Unmodified 1115.5724 0.57235688 1912 P62826 RAN GTP-binding nuclear protein Ran yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 17.165 16.667 2 3.8038E-05 14556 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 142.43 73.512 390950000 183640000 0 0 0 0 0 0 0 0 0 10394000 18712000 6814200 19143000 152250000 43832 1912 39271 366883;366884;366885;366886;366887;366888 289989;289990;289991;289992;289993 289989 2 RHNGDQPEQPELK Unmodified 1546.7488 0.7488177 2051 Q01167 FOXK2 Forkhead box protein K2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 19.53 15.869 3 0.0024905 22907 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.162 54.96 36511000 34131000 0 2380400 0 0 0 0 0 0 0 0 0 0 0 0 43833 2051 39272 366889;366890 289994;289995 289994 2 RHNSASVENVSLRK Unmodified 1595.8492 0.84920044 5203 Q9Y4H2 IRS2 Insulin receptor substrate 2 yes yes 0 0 2 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 20.371 20.595 4 0.0079563 21793 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.939 51.939 47747000 0 0 0 0 0 14892000 0 10164000 6757400 0 7774700 0 0 8158400 0 43834 5203 39273 366891;366892;366893;366894;366895 289996;289997 289996 1 RHPAGPPGEAQEGSAK Unmodified 1587.7754 0.7753668 2920 Q6P1M3 LLGL2 Lethal(2) giant larvae protein homolog 2 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.4 3.2 2 8 2 1 1 1 1 1 1 1 1 8.8331 8.0904 3;4 0.0028454 13091 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.156 33.871 83194000 52199000 0 0 2413900 1491200 2599800 2458900 2260100 0 7095200 0 6445400 6231000 0 0 43835 2920 39274 366896;366897;366898;366899;366900;366901;366902;366903;366904;366905 289998;289999;290000;290001 290000 2 RHPEYAVSVLLR Unmodified 1438.8045 0.80448208 65 CON__P02769 yes yes 0 0 1 By MS/MS 1 0 1 1 109.7 114.96 3 0.036623 96348 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 25.982 20.844 + 6769500 6769500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43836 65 39275 366906 290002 290002 1 RHPTGTTPPVK Unmodified 1189.6568 0.65675521 3994 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 8.6179 8.7423 3 0.00020653 5788 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 64.64 52.064 187360000 0 0 0 10166000 8493300 8647700 12049000 5369200 5469400 14381000 44652000 27927000 17181000 12106000 20919000 43837 3994 39276 366907;366908;366909;366910;366911;366912;366913;366914;366915;366916;366917;366918 290003;290004;290005;290006;290007;290008;290009;290010;290011;290012;290013;290014 290008 6 RHQGTFTDEK Unmodified 1217.5789 0.57889882 3687 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 yes yes 0 0 1 By MS/MS 2 0 2 2 8.631 4.9924 2;3 0.00102 8779 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 108.47 47.71 252190000 252190000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43838 3687 39277 366919;366920 290015;290016;290017 290016 2 RHSNVVILTTSNITEK Unmodified 1810.9901 0.9901106 2557 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 54.165 54.373 3 0.0017015 61736 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 42.059 31.72 6818600 0 0 0 0 0 0 0 0 1767400 0 0 0 5051200 0 0 43839 2557 39278 366921;366922 290018 290018 1 RHTDVQFYTEVGEITTDLGK Unmodified 2308.1335 0.13353995 5231 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 0 1 By MS/MS 2 0 1 1 88.774 80.643 4 0.0065343 104863 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 37.015 33.211 11390000 11390000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43840 5231 39279 366923 290019 290019 1 RHTQAGEGTSLETK Unmodified 1513.7485 0.74848335 3075 Q7Z2Z1 TICRR Treslin yes yes 0 0 1 By MS/MS 2 0 1 1 13.043 9.0479 3 0.0017307 13728 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.727 37.041 9401500 9401500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43841 3075 39280 366924 290020 290020 1 RHVFGESDELIGQK Unmodified 1613.8162 0.81616898 1808 P60174 TPI1 Triosephosphate isomerase yes yes 0 0 1 By MS/MS 10 0 2 2 44.801 45.542 3 0.00012701 48935 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.288 48.006 113570000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 113570000 43842 1808 39281 366925;366926 290021;290022 290021 2 RIACGPPQAK Unmodified 1096.5811 0.58114743 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.541 13.699 2 0.029981 13324 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 91.069 64.685 91950000 0 0 0 5317000 5686200 4724600 5650100 4587100 7669500 8969800 7290500 11894000 11409000 8304000 10448000 43843 5216 39282 366927;366928;366929;366930;366931;366932;366933;366934;366935;366936;366937;366938 290023 290023 0 RIAELSEDDQK Unmodified 1302.6416 0.64155866 4263 Q9BZE4 GTPBP4 Nucleolar GTP-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.91 2.75 3 19 2 1 1 2 2 1 2 2 2 2 2 1 2 22.222 22.056 2;3 0.00096043 28773 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 89.266 70.998 282070000 10378000 0 14859000 0 6558400 29982000 20900000 5765200 14855000 28876000 27260000 38966000 38096000 12225000 33349000 43844 4263 39283 366939;366940;366941;366942;366943;366944;366945;366946;366947;366948;366949;366950;366951;366952;366953;366954;366955;366956;366957;366958;366959;366960 290024;290025;290026;290027;290028;290029;290030;290031;290032;290033;290034;290035;290036 290031 11 RIAEMETQK Unmodified 1104.5597 0.55974328 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14.347 13.778 2 1.2715E-05 21182 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 174.92 99.703 452480000 239980000 25273000 26094000 6295000 6679000 13416000 8777900 8029000 8187000 19390000 18755000 16610000 15012000 12394000 27591000 43845 4634 39284 366961;366962;366963;366964;366965;366966;366967;366968;366969;366970;366971;366972;366973;366974;366975 290037;290038;290039;290040;290041;290042 290041 5 RIAEMETQK Oxidation (M) 1120.5547 0.55465791 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.083 6.2004 2 0.017112 3401 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.98 40.548 141320000 0 0 0 7289600 7136200 12246000 10033000 5166000 6478900 17475000 15527000 15816000 12831000 13888000 17433000 43846 4634 39284 366976;366977;366978;366979;366980;366981;366982;366983;366984;366985;366986;366987 290043 290043 6038 0 RIAGQDLR Unmodified 927.52501 0.52501276 4468 Q9H9A6 LRRC40 Leucine-rich repeat-containing protein 40 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.228 14.39 2 0.0099147 13040 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 125.31 23.671 523470000 0 0 0 33943000 28287000 40035000 32002000 28366000 25786000 53474000 53271000 54736000 53461000 50852000 69259000 43847 4468 39285 366988;366989;366990;366991;366992;366993;366994;366995;366996;366997;366998;366999 290044;290045;290046;290047;290048;290049;290050;290051 290046 0 RIAIEDPYSVK Unmodified 1289.698 0.69795133 2829 Q5VYS8 ZCCHC6 Terminal uridylyltransferase 7 yes yes 0 0 1 By MS/MS 2 0 1 1 64.548 56.269 3 0.021512 75723 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 34.685 15.626 14685000 14685000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43848 2829 39286 367000 290052 290052 1 RIALTDNALIAR Unmodified 1325.7779 0.77793298 1072 P18124 RPL7 60S ribosomal protein L7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 62.959 63.195 3 8.5677E-06 72081 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 95.094 73.864 232160000 0 0 0 0 0 18309000 9820400 16389000 13809000 22338000 19550000 25110000 29384000 26456000 50995000 43849 1072 39287 367001;367002;367003;367004;367005;367006;367007;367008;367009;367010;367011 290053;290054;290055;290056;290057;290058;290059;290060;290061;290062;290063;290064 290054 12 RIANLQTDLSDGLR Unmodified 1570.8427 0.84271808 1124 P21333 FLNA Filamin-A yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 64.904 65.149 3 0.0023279 73820 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.746 69.038 44254000 0 0 0 0 0 3936200 0 2496700 2689400 3695600 4441900 3306300 0 3469000 20218000 43850 1124 39288 367012;367013;367014;367015;367016;367017;367018;367019 290065;290066 290065 1 RIAVHHNSVEDVPEEK Unmodified 1857.9333 0.933324 4979 Q9UKY1 ZHX1 Zinc fingers and homeoboxes protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 3 26.67 27.021 3;4 4.1705E-05 29058 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 70.529 49.071 100910000 0 0 0 0 0 15440000 0 6406500 9974600 13002000 0 0 18705000 13084000 24298000 43851 4979 39289 367020;367021;367022;367023;367024;367025;367026;367027;367028 290067;290068;290069;290070;290071;290072;290073;290074 290074 8 RIAVVGEGREK Unmodified 1212.6939 0.693869 453 O75083 WDR1 WD repeat-containing protein 1 yes yes 0 0 2 By MS/MS 10 0 1 1 14.374 14.81 3 0.019658 13637 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.149 26.425 101670000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 101670000 43852 453 39290 367029 290075 290075 0 RIAYEFVEMK Oxidation (M) 1300.6486 0.64855829 736 P00813 ADA Adenosine deaminase yes yes 0 1 1 By MS/MS 2 0 2 2 61.49 53.234 2;3 0.013623 72005 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.73 34.309 23942000 23942000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43853 736 39291 367030;367031 290076;290077 290076 897 2 RICPNAPDP Unmodified 1038.4917 0.49166372 3555 Q8WUZ0 BCL7C B-cell CLL/lymphoma 7 protein family member C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 35.42 30.559 2 0.040224 42595 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.142 72.178 120970000 74844000 37628000 8495500 0 0 0 0 0 0 0 0 0 0 0 0 43854 3555 39292 367032;367033;367034 290078 290078 0 RIDFIPVSPAPSPTR Unmodified 1651.9046 0.90459006 3803 Q96E09 FAM122A Protein FAM122A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 74.348 74.514 3 0.0002084 85314 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.813 58.099 80197000 0 0 0 0 0 5135000 5862500 5652700 8867300 5817300 8987200 11913000 5145900 11330000 11487000 43855 3803 39293 367035;367036;367037;367038;367039;367040;367041;367042;367043;367044 290079;290080;290081;290082;290083;290084;290085;290086;290087;290088;290089 290082 11 RIDFTPVSPAPSPTR Unmodified 1639.8682 0.86820455 3077 Q7Z309 FAM122B Protein FAM122B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 25 2 2 2 2 2 2 3 2 2 2 2 2 61.052 61.156 2;3 2.5233E-05 69068 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 103.77 91.621 1126500000 0 0 0 59289000 59057000 75078000 74818000 90054000 47864000 96605000 128040000 127920000 94475000 95236000 178070000 43856 3077 39294 367045;367046;367047;367048;367049;367050;367051;367052;367053;367054;367055;367056;367057;367058;367059;367060;367061;367062;367063;367064;367065;367066;367067;367068;367069 290090;290091;290092;290093;290094;290095;290096;290097;290098;290099;290100;290101;290102 290092 11 RIDFTPVSPAPSPTRGFGK Unmodified 2029.0745 0.074508932 3077 Q7Z309 FAM122B Protein FAM122B yes yes 0 0 2 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 2 1 1 2 67.105 67.422 3;4 0.019397 76476 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.657 33.053 49914000 0 0 0 0 0 0 0 3600600 6159600 0 4478500 6676500 4735600 2622300 21641000 43857 3077 39295 367070;367071;367072;367073;367074;367075;367076;367077;367078 290103;290104 290103 1 RIDTPSLEEPSDLEELEQFAK Unmodified 2445.1911 0.19111441 1007 P14859 POU2F1 POU domain, class 2, transcription factor 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 92.196 86.894 3 6.3736E-48 110477 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 102.48 95.449 55585000 48515000 0 7069800 0 0 0 0 0 0 0 0 0 0 0 0 43858 1007 39296 367079;367080 290105;290106;290107;290108 290105 4 RIDYVLQEK Unmodified 1162.6346 0.63462279 5301 Q9Y6Y8 SEC23IP SEC23-interacting protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.223 41.402 2 0.015696 44763 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 155.84 76.375 242660000 0 0 0 12193000 9199200 10253000 11814000 12381000 10494000 25176000 25353000 28393000 25754000 17315000 54333000 43859 5301 39297 367081;367082;367083;367084;367085;367086;367087;367088;367089;367090;367091;367092 290109;290110;290111;290112;290113;290114;290115;290116;290117 290111 8 RIEDNLPAGEE Unmodified 1241.5888 0.58879481 347 O43617 TRAPPC3 Trafficking protein particle complex subunit 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 38.623 38.864 2 0.023442 41914 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.719 43.483 161630000 0 0 0 0 5155000 14981000 9528300 8349700 4939000 10720000 25662000 21036000 7963900 14612000 38686000 43860 347 39298 367093;367094;367095;367096;367097;367098;367099;367100;367101;367102;367103 290118 290118 1 RIEDYGLKPVPGDLVLK Unmodified 1911.0829 0.082948353 3950 Q96PZ0 PUS7 Pseudouridylate synthase 7 homolog yes yes 0 0 2 By MS/MS 2 0 1 1 83.648 75.517 3 0.024327 98700 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.68 41.077 10744000 10744000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43861 3950 39299 367104 290119 290119 1 RIEELNK Unmodified 900.50288 0.50288033 583;2272;4140 Q13330;O94776;Q9BTC8 MTA1;MTA2;MTA3 Metastasis-associated protein MTA1;Metastasis-associated protein MTA2;Metastasis-associated protein MTA3 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 12.137 12.232 2 0.047599 11298 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 119.56 0 292430000 0 0 0 23080000 26603000 44319000 31229000 26595000 24710000 34864000 0 0 40458000 33786000 6781800 43862 2272;583;4140 39300 367105;367106;367107;367108;367109;367110;367111;367112;367113;367114 290120 290120 0 RIEGSGDQVDTLELSGGAR Unmodified 1958.9657 0.96574634 1630 P50570 DNM2 Dynamin-2 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 2 1 1 2 1 53.463 53.693 3 3.3938E-49 60184 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 135.38 108.95 160220000 0 0 0 0 5919000 14884000 6884900 5911000 16410000 0 26085000 14218000 12715000 22138000 35057000 43863 1630 39301 367115;367116;367117;367118;367119;367120;367121;367122;367123;367124;367125;367126;367127 290121;290122;290123;290124;290125;290126;290127;290128;290129;290130;290131 290124 10 RIELPYAEPAFGSK Unmodified 1576.8249 0.82494275 3056 Q7L7V1 DHX32 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 yes yes 0 0 1 By MS/MS 2 0 1 1 81.598 73.468 3 0.005141 96223 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 35.771 25.992 26849000 26849000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43864 3056 39302 367128 290132 290132 1 RIEPADAHVLQK Unmodified 1375.7572 0.75719754 4310 Q9GZZ1 NAA50 N-alpha-acetyltransferase 50 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.97 2.68 1 7 1 61 5 3 1 7 4 6 6 5 6 7 6 6 2 3 3 35.719 35.56 2;3 9.7892E-15 34142 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 119.69 81.287 54249000000 1070900000 1508000 816360 2956200000 4816900000 6791300000 4457200000 4727300000 5144500000 6245600000 6963500000 10696000000 120070000 92345000 164230000 43865 4310 39303 367129;367130;367131;367132;367133;367134;367135;367136;367137;367138;367139;367140;367141;367142;367143;367144;367145;367146;367147;367148;367149;367150;367151;367152;367153;367154;367155;367156;367157;367158;367159;367160;367161;367162;367163;367164;367165;367166;367167;367168;367169;367170;367171;367172;367173;367174;367175;367176;367177;367178;367179;367180;367181;367182;367183;367184;367185;367186;367187;367188;367189;367190;367191;367192;367193;367194;367195;367196;367197;367198 290133;290134;290135;290136;290137;290138;290139;290140;290141;290142;290143;290144;290145;290146;290147;290148;290149;290150;290151;290152;290153;290154;290155;290156;290157;290158;290159;290160;290161;290162;290163;290164;290165;290166;290167;290168;290169;290170;290171;290172;290173;290174;290175;290176;290177;290178;290179;290180;290181;290182;290183;290184;290185;290186;290187;290188;290189;290190;290191;290192;290193;290194;290195;290196;290197;290198;290199;290200;290201;290202;290203;290204;290205;290206;290207;290208;290209;290210 290153 69 RIEPAEELNSNDMK Unmodified 1644.7777 0.77773456 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 1 By MS/MS 2 0 1 1 46.736 42.884 3 0.0069112 54134 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 45.864 38.662 6464000 0 0 6464000 0 0 0 0 0 0 0 0 0 0 0 0 43866 1492 39304 367199 290211 290211 1 RIETDERDSTNR Unmodified 1490.7073 0.70734681 1241 P29083 GTF2E1 General transcription factor IIE subunit 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 14 1 1 1 2 1 1 1 2 1 1 2 6.5637 6.7233 3 0.00019848 4886 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 87.498 74.872 90817000 0 0 0 3793900 0 8232900 6941800 7063300 6240900 7976800 11064000 10035000 9488100 6699300 13281000 43867 1241 39305 367200;367201;367202;367203;367204;367205;367206;367207;367208;367209;367210;367211;367212;367213 290212;290213;290214;290215;290216 290215 5 RIEVEQALAHPYLEQYYDPSDEPIAEAPFK Unmodified 3517.7042 0.7041655 1236 P28482 MAPK1 Mitogen-activated protein kinase 1 yes yes 0 0 1 By MS/MS 2 0 1 1 93.237 85.106 4 1.1741E-19 110160 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.404 68.888 41130000 41130000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43868 1236 39306 367214 290217;290218 290218 2 RIFHTVTTTDDPVIRK Unmodified 1898.0374 0.037395144 278 O15371 EIF3D Eukaryotic translation initiation factor 3 subunit D yes yes 0 0 2 By MS/MS By MS/MS 10 0 2 1 1 44.925 45.671 4 1.4654E-24 49934 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 106.14 103.32 51866000 0 0 0 0 0 0 0 0 0 0 0 17065000 0 0 34800000 43869 278 39307 367215;367216 290219;290220 290219 2 RIFQIHTSR Unmodified 1156.6465 0.64652488 1875 P62191 PSMC1 26S protease regulatory subunit 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 2 30.099 30.488 3 0.001663 31955 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 72.643 49.324 332070000 0 0 0 0 0 76587000 0 0 22055000 10919000 19465000 104990000 18427000 16257000 63375000 43870 1875 39308 367217;367218;367219;367220;367221;367222;367223;367224;367225 290221;290222;290223;290224;290225 290225 4 RIGDELDSNMELQR Oxidation (M) 1690.7944 0.79444726 2140 Q07812 BAX Apoptosis regulator BAX yes yes 0 1 1 By MS/MS By MS/MS 10 0 2 1 1 44.166 43.921 3 0.00074382 49191 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 49.188 42.607 14289000 0 0 0 4638800 0 9650500 0 0 0 0 0 0 0 0 0 43871 2140 39309 367226;367227 290226 290226 3446 1 RIGDELDSNMELQR Unmodified 1674.7995 0.79953264 2140 Q07812 BAX Apoptosis regulator BAX yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 56.309 56.655 3 0.0015953 63526 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.691 31.554 23640000 0 0 0 0 0 0 0 0 0 0 0 0 4731300 7517500 11391000 43872 2140 39309 367228;367229;367230;367231 290227;290228;290229 290228 3 RIGDVLVNQFSGENAER Unmodified 1902.9548 0.95478773 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 69.562 69.887 3 0.00012637 79597 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.528 57.998 9998300 0 0 0 0 0 0 0 1989600 0 0 0 0 0 0 8008700 43873 2193 39310 367232;367233 290230 290230 1 RIGVPSATEIIK Unmodified 1282.7609 0.76088593 4588 Q9NR30 DDX21 Nucleolar RNA helicase 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 64.534 63.595 3 9.5994E-05 87414 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.324 56.928 57856000 17884000 0 0 0 0 5707000 0 0 5160000 0 0 9173000 7695600 4707700 7528800 43874 4588 39311 367234;367235;367236;367237;367238;367239;367240 290231;290232;290233;290234 290233 4 RIHEVQEEMK Oxidation (M) 1313.6398 0.63978452 623 O95155 UBE4B Ubiquitin conjugation factor E4 B yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 6.9223 7.0773 3 0.0015755 5276 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 64.82 49.191 38846000 0 0 0 2577700 0 7416500 0 0 2416900 6835100 7065600 0 0 5753900 6780900 43875 623 39312 367241;367242;367243;367244;367245;367246;367247 290235;290236;290237;290238;290239 290238 763 5 RIHEVQEEMK Unmodified 1297.6449 0.6448699 623 O95155 UBE4B Ubiquitin conjugation factor E4 B yes yes 0 0 1 By MS/MS 2 0 1 1 22.819 17.922 3 0.0048998 25591 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.848 60.685 41075000 41075000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43876 623 39312 367248 290240 290240 1 RIHSDTFASGGER Unmodified 1431.6855 0.68548916 2572 Q15750 TAB1 TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 15.169 15.487 3 0.0022669 14832 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 46.318 41.002 46591000 0 0 0 0 0 0 0 0 0 10354000 0 9298600 6048400 7662200 13228000 43877 2572 39313 367249;367250;367251;367252;367253 290241;290242 290242 2 RIIDDSEITK Unmodified 1188.635 0.63501672 3734;1846 Q96A72;P61326 MAGOHB;MAGOH Protein mago nashi homolog 2;Protein mago nashi homolog no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.16 3.73 5 2 12 3 2 2 1 1 1 1 1 1 1 1 1 1 1 1 36.562 34.811 2;3 3.3144E-07 37317 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 154.84 68.05 855610000 115230000 85305000 310140000 12331000 9174900 25606000 12741000 13959000 23223000 20188000 43190000 41608000 23037000 42064000 77815000 43878 3734;1846 39314 367254;367255;367256;367257;367258;367259;367260;367261;367262;367263;367264;367265;367266;367267;367268;367269;367270;367271;367272 290243;290244;290245;290246;290247;290248;290249;290250;290251;290252;290253;290254;290255 290250 9 RIIDNSSEQKPENELK Unmodified 1898.9698 0.96976909 2561 Q15652 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 29.228 29.399 3 1.4761E-19 30944 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 90.754 69.296 57045000 0 0 0 3306000 2261800 0 5363100 5769300 0 0 0 13479000 0 10988000 15879000 43879 2561 39315 367273;367274;367275;367276;367277;367278;367279;367280 290256;290257;290258;290259;290260;290261;290262;290263 290261 8 RIIDSAR Unmodified 829.477 0.47699993 1312 P31947 SFN 14-3-3 protein sigma yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 10.347 10.482 2 4.4659E-09 9352 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 165.52 40.434 269510000 0 0 0 29737000 10553000 14282000 18350000 12116000 9953200 6334100 18031000 32102000 13794000 38204000 66051000 43880 1312 39316 367281;367282;367283;367284;367285;367286;367287;367288;367289;367290;367291;367292 290264;290265 290265 1 RIILYDTSSK Unmodified 1194.6608 0.66083754 3460 Q8NHV4 NEDD1 Protein NEDD1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 39.685 39.926 2 0.013585 42921 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 103.88 44.282 42666000 0 0 0 0 2966500 3975700 3713900 3415400 0 4906400 4597100 6329900 0 2843300 9917500 43881 3460 39317 367293;367294;367295;367296;367297;367298;367299;367300;367301 290266 290266 1 RIITYNEAMDSPDQ Unmodified 1651.7512 0.75118546 3091 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 52.686 52.783 2 1.9128E-09 59624 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 102.4 64.704 19806000 0 0 0 0 3374600 0 4750100 3769900 0 0 0 7911800 0 0 0 43882 3091 39318 367302;367303;367304;367305;367306;367307 290267;290268;290269;290270;290271 290267 5 RIITYNEAMDSPDQ Oxidation (M) 1667.7461 0.74610008 3091 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 yes yes 0 1 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 41.079 41.5 2 1.1216E-09 45855 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 100.55 83.922 28521000 0 0 0 0 0 0 3571800 0 0 4200000 5160700 6724100 4775900 0 4088700 43883 3091 39318 367308;367309;367310;367311;367312;367313;367314;367315 290272;290273;290274;290275;290276 290276 4698 5 RILDAAGANLK Unmodified 1140.6615 0.66150624 4852 Q9UBQ7 GRHPR Glyoxylate reductase/hydroxypyruvate reductase yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS 8.4 3.2 1 4 1 1 1 1 1 41.963 40.661 2 0.039224 43394 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.067 20.105 88702000 62779000 0 0 3391200 0 0 0 0 0 0 6113000 3254100 0 0 13164000 43884 4852 39319 367316;367317;367318;367319;367320 290277;290278 290277 1 RILDEIEEHNIK Unmodified 1507.7995 0.79945628 2474 Q15019 SEPT2 Septin-2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 60.531 57.994 3 0.003573 81498 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.585 40.606 56843000 17911000 0 0 0 0 17093000 0 0 0 0 0 0 0 0 21839000 43885 2474 39320 367321;367322;367323 290279;290280;290281 290281 3 RILDSAEFIK Unmodified 1190.6659 0.66592292 1977 P78347 GTF2I General transcription factor II-I yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 2 1 2 1 1 2 2 1 2 1 2 2 61.195 61.305 2;3 0.0008952 69585 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 66.19 44.444 267090000 0 0 0 11311000 10994000 28646000 13853000 23379000 20307000 17153000 16531000 31546000 17319000 26111000 49935000 43886 1977 39321 367324;367325;367326;367327;367328;367329;367330;367331;367332;367333;367334;367335;367336;367337;367338;367339;367340;367341;367342 290282;290283;290284;290285;290286;290287;290288;290289;290290 290290 7 RILDSNK Unmodified 844.47667 0.47666558 3692 Q92973 TNPO1 Transportin-1 yes yes 0 0 1 By MS/MS 2 0 1 1 11.274 7.4009 2 0.035923 11737 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 138.26 47.555 802480000 802480000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43887 3692 39322 367343 290291 290291 0 RILEDQEENPLPAALVQPHTGK Unmodified 2454.2867 0.28668655 641 O95336 PGLS 6-phosphogluconolactonase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 4.83 3.67 3 1 2 4 1 1 77.77 73.123 3;4 2.9921E-10 94954 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.359 44.332 803180000 764030000 0 0 0 0 10738000 0 0 0 0 0 0 0 0 28406000 43888 641 39323 367344;367345;367346;367347;367348;367349 290292;290293;290294;290295;290296;290297 290295 6 RILELDQFK Unmodified 1160.6554 0.65535823 973 P12956 XRCC6 X-ray repair cross-complementing protein 6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.68 1.57 1 24 1 2 2 2 2 2 2 2 2 2 2 2 2 65.044 64.805 2;3 2.7909E-05 74381 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 134.25 86.398 742840000 48717000 0 0 17264000 10077000 65150000 26285000 38273000 43964000 45251000 48735000 81125000 57488000 61483000 199030000 43889 973 39324 367350;367351;367352;367353;367354;367355;367356;367357;367358;367359;367360;367361;367362;367363;367364;367365;367366;367367;367368;367369;367370;367371;367372;367373;367374 290298;290299;290300;290301;290302;290303;290304;290305;290306;290307;290308;290309;290310;290311 290308 8 RILELSGSSSEDSEK Unmodified 1635.7952 0.79515877 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 36.477 36.705 3 0.00039788 39229 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.827 41.548 33495000 0 0 0 0 3466300 0 0 0 0 0 0 0 7118700 6759400 16151000 43890 1986 39325 367375;367376;367377;367378 290312;290313;290314 290312 2 RILEPDDFLDDLDDEDYEEDTPK Unmodified 2796.2138 0.21375993 3660 Q92785 DPF2 Zinc finger protein ubi-d4 yes yes 0 0 1 By MS/MS 2 0 1 1 93.473 85.342 3 1.5881E-13 110520 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.683 77.955 7489800 7489800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43891 3660 39326 367379 290315;290316 290315 2 RILGSASPEEEQEK Unmodified 1571.7791 0.77911477 3092 Q7Z422 SZRD1 SUZ domain-containing protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 34.127 27.895 3 0.028919 39302 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 34.987 25.454 21485000 21485000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43892 3092 39327 367380 290317 290317 0 RILNVPQELYEK Unmodified 1500.83 0.83002813 2231 Q13085 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 68.062 67.371 3 0.00018516 76164 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.781 43.882 55164000 19376000 0 0 0 0 4996500 0 1815500 2369400 0 2630100 4343900 3049400 4178300 12405000 43893 2231 39328 367381;367382;367383;367384;367385;367386;367387;367388;367389;367390 290318;290319;290320;290321;290322;290323;290324;290325;290326 290320 9 RILQSLEK Unmodified 985.59203 0.59202969 1600 P49790 NUP153 Nuclear pore complex protein Nup153 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 31.187 31.272 2 0.042244 33522 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 103.56 9.2609 117090000 0 0 0 8406200 9066800 13768000 13077000 13283000 11478000 10556000 13757000 0 16608000 7094400 0 43894 1600 39329 367391;367392;367393;367394;367395;367396;367397;367398;367399;367400 290327 290327 0 RILSKPIEVQVGGR Unmodified 1550.9257 0.92565985 3041 Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 0 0 2 By matching By MS/MS 10 0 2 1 1 47.596 48.333 3 0.0065394 53460 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.657 57.189 22002000 0 0 0 0 0 0 0 0 0 0 0 6033100 0 0 15969000 43895 3041 39330 367401;367402 290328 290328 0 RIMLFTNEDNPHGNDSAK Oxidation (M) 2073.9538 0.95380145 973 P12956 XRCC6 X-ray repair cross-complementing protein 6 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 2 42.491 42.808 3;4 9.4431E-06 46291 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.202 57.493 175200000 0 0 0 0 5599600 21179000 0 13055000 0 0 0 31207000 0 17629000 86524000 43896 973 39331 367403;367404;367405;367406;367407;367408;367409 290329;290330;290331;290332 290330 1291 4 RIMLFTNEDNPHGNDSAK Unmodified 2057.9589 0.95888683 973 P12956 XRCC6 X-ray repair cross-complementing protein 6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 2 1 1 1 2 1 1 2 48.054 48.351 3;4 4.307E-12 54773 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 90.654 81.074 216470000 0 0 0 0 0 48962000 6363700 10392000 9400800 16267000 0 13382000 0 21996000 89708000 43897 973 39331 367410;367411;367412;367413;367414;367415;367416;367417;367418;367419;367420 290333;290334;290335;290336;290337;290338;290339;290340;290341 290340 5 RINNEDNSQFK Unmodified 1363.648 0.64804102 4967 Q9UKI8 TLK1 Serine/threonine-protein kinase tousled-like 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 1 2 15.908 12.943 2;3 0.0036875 16331 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 54.471 43.861 17424000 9871700 0 7552300 0 0 0 0 0 0 0 0 0 0 0 0 43898 4967 39332 367421;367422;367423 290342;290343;290344 290343 3 RINPPSSGGTSSSPIK Unmodified 1583.8267 0.82673367 1007 P14859 POU2F1 POU domain, class 2, transcription factor 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 32.013 31.68 3 3.6933E-32 34513 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 118.31 109.71 291190000 32866000 0 0 13547000 18106000 21031000 18544000 24950000 16216000 21373000 27794000 25232000 20490000 22067000 28973000 43899 1007 39333 367424;367425;367426;367427;367428;367429;367430;367431;367432;367433;367434;367435;367436 290345;290346;290347;290348;290349;290350;290351;290352;290353;290354;290355;290356;290357;290358;290359;290360;290361;290362;290363 290355 18 RINVELSTK Unmodified 1058.6084 0.60840804 3948 Q96PK6 RBM14 RNA-binding protein 14 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 35.976 35.14 2 0.032157 36977 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 99.442 26.182 92612000 66934000 0 0 1789900 2326600 0 2757600 2487500 0 4012100 0 0 6275600 6028400 0 43900 3948 39334 367437;367438;367439;367440;367441;367442;367443;367444 290364;290365 290365 2 RIPADTFAALK Unmodified 1201.6819 0.68190733 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 60.342 60.447 2;3 6.2302E-06 68000 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.06 91.191 996620000 0 0 0 66755000 50098000 99255000 74137000 54272000 59740000 82817000 107520000 109100000 78435000 65019000 149480000 43901 1518 39335 367445;367446;367447;367448;367449;367450;367451;367452;367453;367454;367455;367456;367457;367458;367459;367460;367461;367462;367463;367464;367465;367466;367467;367468 290366;290367;290368;290369;290370;290371;290372;290373;290374;290375;290376;290377;290378;290379;290380;290381;290382;290383;290384;290385;290386;290387;290388 290373 16 RIPEEILGK Unmodified 1053.6182 0.61824444 1373 P36507 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 48.956 48.221 2 0.0041793 68496 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 130.75 85.666 461440000 194170000 0 14205000 0 11068000 29627000 18907000 13577000 13181000 30339000 24492000 23370000 24376000 21162000 42966000 43902 1373 39336 367469;367470;367471;367472;367473;367474;367475;367476;367477;367478;367479;367480;367481 290389;290390;290391;290392;290393 290391 2 RIPGSTEAFPHQHR Unmodified 1631.8281 0.82807107 3994 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a yes yes 0 0 1 By MS/MS 10 0 1 1 26.799 27.48 3 0.018401 28492 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 21.458 9.4816 13315000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13315000 43903 3994 39337 367482 290394 290394 1 RIPQSTLSEFYPR Unmodified 1592.8311 0.83109076 1121 P21281 ATP6V1B2 V-type proton ATPase subunit B, brain isoform yes yes 0 0 1 By MS/MS By matching 10 0 2 1 1 70.514 70.556 3 0.0022351 81173 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 46.481 39.794 5329600 0 0 0 0 0 3182400 0 0 0 2147200 0 0 0 0 0 43904 1121 39338 367483;367484 290395 290395 1 RIPSIVSSPLNSPLDR Unmodified 1749.9737 0.97373226 1600 P49790 NUP153 Nuclear pore complex protein Nup153 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.241 77.301 3 1.3344E-08 89151 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 90.348 81.066 185990000 0 0 0 3121200 4417600 18097000 9746400 12657000 15000000 17167000 15366000 17877000 11953000 14450000 46132000 43905 1600 39339 367485;367486;367487;367488;367489;367490;367491;367492;367493;367494;367495;367496 290396;290397;290398;290399;290400;290401;290402;290403;290404;290405;290406;290407;290408;290409 290397 13 RIPSTDANLPSGGK Unmodified 1411.7419 0.7419414 4985 Q9UL26 RAB22A Ras-related protein Rab-22A yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 2 1 2 1 2 2 2 2 2 2 33.919 34.149 2;3 0.0039424 37115 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 53.995 48.958 145730000 0 0 0 2928600 10806000 8284400 16479000 0 4150700 13487000 24457000 19120000 17088000 12853000 16077000 43906 4985 39340 367497;367498;367499;367500;367501;367502;367503;367504;367505;367506;367507;367508;367509;367510;367511;367512;367513;367514;367515 290410;290411;290412;290413;290414;290415;290416;290417;290418;290419 290415 4 RIPVSPEQAR Unmodified 1151.6411 0.64110515 4464 Q9H981 ACTR8 Actin-related protein 8 yes yes 0 0 1 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 27.1 27.39 3 0.022864 28334 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 34.773 18.44 25043000 0 0 0 1398400 0 0 3003100 2288100 0 2595200 3628200 2911600 2738800 3400200 3079500 43907 4464 39341 367516;367517;367518;367519;367520;367521;367522;367523;367524 290420 290420 1 RIPYAPSGEIPK Unmodified 1326.7296 0.7295858 425 O60701 UGDH UDP-glucose 6-dehydrogenase yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 7.54 3.69 4 9 2 2 1 1 1 1 1 1 1 1 1 55.561 53.595 2;3 0.0046602 58903 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 35.737 26.687 702550000 578040000 51364000 0 0 0 5813800 2836100 3629400 0 6997900 8510900 9670600 5137600 4279100 26268000 43908 425 39342 367525;367526;367527;367528;367529;367530;367531;367532;367533;367534;367535;367536;367537 290421;290422;290423;290424 290424 3 RIQEIIEQLDVTTSEYEK Unmodified 2193.1165 0.11649291 930 P10809 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 0 0 1 By MS/MS 2.33 0.471 2 1 3 90.29 83.68 2;3 1.8172E-11 107765 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 103.17 97.591 201350000 201350000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43909 930 39343 367538;367539;367540 290425;290426;290427 290427 2 RIQLPSEK Unmodified 969.56073 0.56072956 1812 P60520 GABARAPL2 Gamma-aminobutyric acid receptor-associated protein-like 2 yes yes 0 0 1 By MS/MS 2 0 1 1 39.455 32.832 2 0.047228 45496 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 164.77 108.23 92959000 92959000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43910 1812 39344 367541 290428 290428 0 RIQLVEEELDRAQER Unmodified 1882.9861 0.98608786 1957;90;853;831;884 CON__Q3SX28;P06753;P07951;P09493;P67936 TPM3;TPM2;TPM1;TPM4 Tropomyosin alpha-3 chain;Tropomyosin beta chain;Tropomyosin alpha-1 chain;Tropomyosin alpha-4 chain no no 0 0 2 By MS/MS 10 0 1 1 60.85 61.43 3 0.0072274 69270 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.097 30.964 + 16437000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16437000 43911 90;831;853;884;1957 39345 367542 290429 290429 1 RIQQLTEEIGR Unmodified 1341.7365 0.7364621 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 45.851 46.02 2;3 0.00011876 51771 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 87.667 56.778 699400000 0 0 0 24867000 19954000 51976000 35592000 35595000 36582000 56646000 64092000 83878000 79111000 67506000 143600000 43912 965 39346 367543;367544;367545;367546;367547;367548;367549;367550;367551;367552;367553;367554;367555;367556;367557;367558;367559;367560;367561;367562;367563;367564;367565;367566 290430;290431;290432;290433;290434;290435;290436;290437;290438;290439;290440;290441;290442;290443 290430 12 RIQSLLDIQEK Unmodified 1341.7616 0.76161421 3702 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.53 1.88 1 16 1 1 1 2 1 1 1 2 1 2 1 1 2 62.843 62.503 2;3 0.00013815 87632 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.03 86.192 189860000 64707000 0 0 2190000 12839000 11974000 3642000 3511100 3762600 14727000 5346300 14424000 7011700 7582600 38143000 43913 3702 39347 367567;367568;367569;367570;367571;367572;367573;367574;367575;367576;367577;367578;367579;367580;367581;367582;367583 290444;290445;290446;290447;290448;290449;290450;290451;290452 290449 9 RIQTYLQSTK Unmodified 1236.6826 0.68263561 1268 P30085 CMPK1 UMP-CMP kinase yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 30.294 30.647 2 0.041382 31704 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.974 49.287 42984000 0 0 0 0 0 5281700 0 0 3092600 2821200 5520700 5453000 2414100 3465200 14936000 43914 1268 39348 367584;367585;367586;367587;367588;367589;367590;367591 290453 290453 1 RIQVPIEDILPSK Unmodified 1506.877 0.87697832 3463 Q8NI08 NCOA7 Nuclear receptor coactivator 7 yes yes 0 0 1 By MS/MS 2 0 1 1 88.255 80.125 3 0.014183 104347 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 30.308 24.767 3576100 3576100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43915 3463 39349 367592 290454 290454 1 RIRLEDGQTADGQTEEAAEPGEQLQTQK Unmodified 3097.4912 0.49121261 3848 Q96G46 DUS3L tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like yes yes 0 0 2 By MS/MS 2 0 1 1 56.381 48.233 4 4.8154E-09 66025 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.012 60.232 7730000 7730000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43916 3848 39350 367593 290455;290456 290456 2 RISAVSVAER Unmodified 1086.6146 0.61455605 2152 Q08211 DHX9 ATP-dependent RNA helicase A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.507 27.704 2 0.046466 28712 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 76.282 45.053 261190000 0 0 0 14999000 15585000 20776000 18279000 12778000 13592000 24363000 27996000 26205000 32461000 23850000 30307000 43917 2152 39351 367594;367595;367596;367597;367598;367599;367600;367601;367602;367603;367604;367605 290457 290457 0 RISCYEASYQPLDPDK Unmodified 1940.8938 0.89382695 2640 Q16875 PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase yes yes 0 0 1 By MS/MS 2 0 1 1 63.733 55.453 3 0.0048535 74754 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 44.662 33.618 10011000 10011000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43918 2640 39352 367606 290458 290458 1 RISEQFTAMFR Oxidation (M) 1400.6871 0.68706906 1963;842;2350;4182;2306 P07437;P68371;Q13509;Q13885;Q9BVA1 TUBB;TUBB4B;TUBB3;TUBB2A;TUBB2B Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-3 chain;Tubulin beta-2A chain;Tubulin beta-2B chain no no 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 2 1 1 1 58.047 58.21 3 0.0012721 65902 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 59.57 51.659 51685000 0 0 0 0 0 0 7776200 9791700 15023000 9693900 0 0 9399500 0 0 43919 842;1963;2306;2350;4182 39353 367607;367608;367609;367610;367611;367612 290459;290460;290461;290462 290460 1040 2 RISICSSDK Unmodified 1064.5284 0.52844316 2314 Q13547 HDAC1 Histone deacetylase 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16.921 16.442 2 1.1303E-06 26022 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 160.75 71.204 483040000 156990000 8157800 0 11258000 9761900 14812000 15858000 7686500 16379000 20765000 25668000 51559000 36461000 37550000 70133000 43920 2314 39354 367613;367614;367615;367616;367617;367618;367619;367620;367621;367622;367623;367624;367625;367626 290463;290464;290465;290466;290467;290468 290465 5 RISIGGGSCAISGGYGSR Unmodified 1753.853 0.85296519 66;58;779 P04259;CON__P02538;P02538;CON__P04259 KRT6B;KRT6A Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 6A no no 0 0 1 By MS/MS By matching By MS/MS 10 0 3 1 1 1 49.501 49.456 3 0.00065704 57593 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 44.641 41.735 + 73669000 0 0 0 33507000 0 0 0 0 0 7598700 0 0 32564000 0 0 43921 779;58;66 39355 367627;367628;367629 290469;290470 290470 2 RISISTSGGSFR Unmodified 1266.668 0.66804818 74 CON__P13647;P13647 KRT5 Keratin, type II cytoskeletal 5 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 2 1 2 2 42.883 43.051 2;3 7.6123E-06 49149 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 100.22 91.493 + 4116300000 0 0 0 673480000 163450000 256500000 215720000 674380000 198020000 305340000 382830000 438530000 402420000 170150000 235460000 43922 74 39356 367630;367631;367632;367633;367634;367635;367636;367637;367638;367639;367640;367641;367642;367643;367644;367645;367646;367647;367648;367649;367650;367651;367652 290471;290472;290473;290474;290475;290476;290477;290478;290479;290480;290481;290482;290483;290484;290485;290486;290487;290488;290489;290490;290491;290492 290488 17 RISLEQNESQTFK Unmodified 1578.8002 0.80018457 4350 Q9H1H9 KIF13A Kinesin-like protein KIF13A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.57 3.96 3 4 2 1 1 1 1 1 46.004 43.346 2;3 0.0013336 60903 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.353 61.66 198870000 169410000 0 2248900 0 0 6751600 0 6179400 0 0 0 0 6625800 0 7651900 43923 4350 39357 367653;367654;367655;367656;367657;367658;367659 290493;290494;290495 290494 2 RISSDFEVGDSMASEEVK Unmodified 1984.9048 0.90478557 4471 Q9H9E3 COG4 Conserved oligomeric Golgi complex subunit 4 yes yes 0 0 1 By MS/MS 2 0 1 1 66.996 63.253 3 0.00094658 78498 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 39.237 33.694 4681000 0 0 4681000 0 0 0 0 0 0 0 0 0 0 0 0 43924 4471 39358 367660 290496 290496 1 RITADQALK Unmodified 1014.5822 0.58219329 2315 Q13555 CAMK2G Calcium/calmodulin-dependent protein kinase type II subunit gamma yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 20.352 20.525 2 0.015627 19819 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 104.01 40.449 197560000 0 0 0 15945000 14450000 13496000 14103000 9702400 14244000 20205000 0 29300000 23869000 19504000 22740000 43925 2315 39359 367661;367662;367663;367664;367665;367666;367667;367668;367669;367670;367671 290497;290498 290497 0 RITAFHNAHDLSK Unmodified 1508.7848 0.78480927 3326 Q8N3U4 STAG2 Cohesin subunit SA-2 yes yes 0 0 1 By MS/MS 10 0 1 1 26.994 26.997 3 0.030034 29032 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 26.591 7.5158 5211700 0 0 0 0 0 5211700 0 0 0 0 0 0 0 0 0 43926 3326 39360 367672 290499 290499 1 RITASEALK Unmodified 987.57129 0.57129425 2316 Q13557 CAMK2D Calcium/calmodulin-dependent protein kinase type II subunit delta yes yes 0 0 1 By MS/MS 2 0 1 1 29.971 24.351 2 0.011057 34187 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.41 39.495 58960000 58960000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43927 2316 39361 367673 290500 290500 0 RITEAEK Unmodified 845.46068 0.46068117 1017 P15311 EZR Ezrin yes yes 0 0 1 By MS/MS 2 0 1 1 2.0352 -0.11735 2 0.025337 1225 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 130.22 47.55 436280000 0 0 436280000 0 0 0 0 0 0 0 0 0 0 0 0 43928 1017 39362 367674 290501 290501 0 RITFLIAQEK Unmodified 1217.7132 0.71320746 180 O00763 ACACB Acetyl-CoA carboxylase 2;Biotin carboxylase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.8023 6.926 3 0.0095426 4760 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 43.282 7.7406 1433800000 0 0 0 139120000 98578000 127350000 80500000 63978000 151060000 213720000 52053000 26574000 148220000 180520000 152100000 43929 180 39363 367675;367676;367677;367678;367679;367680;367681;367682;367683;367684;367685;367686 290502;290503 290502 2 RITHISAEQK Unmodified 1181.6517 0.65166983 4535 Q9NP71 MLXIPL Carbohydrate-responsive element-binding protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 11.809 11.871 3 0.018326 10669 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 27.772 17.02 38488000 0 0 0 5673000 5441000 0 6992500 7217800 0 3700200 0 9463800 0 0 0 43930 4535 39364 367687;367688;367689;367690;367691;367692 290504 290504 1 RITITESNMK Unmodified 1191.6282 0.6281572 1275 P30291 WEE1 Wee1-like protein kinase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 30.288 30.508 2 0.046451 31961 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 67.993 28.971 21358000 0 0 0 1692000 0 0 2256300 0 3069000 0 6261900 4643600 0 3435200 0 43931 1275 39365 367693;367694;367695;367696;367697;367698 290505 290505 1 RITRPGNTDDPSGGNK Unmodified 1683.8289 0.82885893 3567 Q8WVV9 HNRNPLL Heterogeneous nuclear ribonucleoprotein L-like yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 9.7246 9.8559 3 2.0169E-06 6073 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 84.842 62.611 161060000 0 0 0 8922800 6977600 14493000 12721000 9591400 7507300 10288000 29066000 19694000 13405000 9885300 18510000 43932 3567 39366 367699;367700;367701;367702;367703;367704;367705;367706;367707;367708;367709;367710 290506;290507;290508;290509;290510;290511;290512;290513 290510 4 RITSPLMEPSSIEK Oxidation (M) 1602.8287 0.8287075 1228 P28066 PSMA5 Proteasome subunit alpha type-5 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.75 3.96 14 1 13 10 3 2 1 1 1 2 1 1 1 2 2 1 57.509 53.499 2;3 2.5349E-08 56824 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 92.935 79.798 2768400000 2081200000 142330000 72890000 66182000 0 42470000 0 0 0 53391000 87633000 69310000 56328000 65799000 30824000 43933 1228 39367 367711;367712;367713;367714;367715;367716;367717;367718;367719;367720;367721;367722;367723;367724;367725;367726;367727;367728;367729;367730;367731;367732;367733;367734;367735;367736;367737;367738 290514;290515;290516;290517;290518;290519;290520;290521;290522;290523;290524;290525;290526;290527;290528;290529;290530;290531;290532;290533;290534;290535;290536;290537;290538;290539;290540;290541;290542;290543;290544;290545;290546;290547;290548;290549;290550;290551 290539 1819 34 RITSPLMEPSSIEK Unmodified 1586.8338 0.83379288 1228 P28066 PSMA5 Proteasome subunit alpha type-5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 6 2 20 4 3 1 1 1 2 2 2 1 2 2 2 1 2 2 61.87 60.379 2;3 0.00031502 66993 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.899 38.545 3067700000 2376600000 226990000 12335000 5017600 5352800 28645000 18383000 24772000 2750000 31705000 12041000 59879000 4299000 48841000 210170000 43934 1228 39367 367739;367740;367741;367742;367743;367744;367745;367746;367747;367748;367749;367750;367751;367752;367753;367754;367755;367756;367757;367758;367759;367760;367761;367762;367763;367764;367765;367766 290552;290553;290554;290555;290556;290557;290558;290559;290560;290561;290562;290563;290564;290565;290566;290567;290568;290569;290570;290571;290572 290558 19 RIVEGILK Unmodified 926.5913 0.59130141 2523 Q15370 TCEB2 Transcription elongation factor B polypeptide 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 2 1 1 1 40.97 41.192 2 0.024728 47063 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 110.81 25.543 1080100000 0 0 0 43912000 40674000 70980000 61680000 63665000 48299000 74928000 131420000 136170000 72981000 101840000 233600000 43935 2523 39368 367767;367768;367769;367770;367771;367772;367773;367774;367775;367776;367777;367778;367779 290573;290574;290575;290576 290576 0 RIVLVDDSIVR Unmodified 1283.7561 0.75613491 2124 Q06203 PPAT Amidophosphoribosyltransferase yes yes 0 0 1 By MS/MS By matching By MS/MS 10 0 3 1 1 1 65.379 65.735 3 0.040059 74352 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 18.566 14.936 11308000 0 0 0 0 0 0 0 0 0 0 2498900 0 0 1467700 7341800 43936 2124 39369 367780;367781;367782 290577 290577 1 RIVNHAVVNEDPNAK Unmodified 1674.8802 0.88016622 4350 Q9H1H9 KIF13A Kinesin-like protein KIF13A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.82 3.56 3 8 3 1 1 1 1 1 1 1 1 24.982 23.678 2;3;4 5.6395E-05 24220 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 70.281 62.91 154320000 92483000 0 0 0 0 7023000 0 5278500 0 6009100 6923500 11083000 7645100 5534900 12344000 43937 4350 39370 367783;367784;367785;367786;367787;367788;367789;367790;367791;367792;367793 290578;290579;290580;290581;290582;290583;290584;290585;290586;290587;290588;290589;290590 290580 13 RIVPGQFLAVDPK Unmodified 1438.8296 0.8296342 2528 Q15393 SF3B3 Splicing factor 3B subunit 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 2 72.669 72.886 2;3 0.0022602 83144 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.657 32.46 31941000 0 0 0 0 0 0 0 0 2827100 3121000 0 0 3300300 4164600 18528000 43938 2528 39371 367794;367795;367796;367797;367798;367799 290591;290592;290593;290594;290595;290596 290592 6 RIVSGIIHHTQAPK Unmodified 1555.8947 0.89469407 4292 Q9C0I1 MTMR12 Myotubularin-related protein 12 yes yes 0 0 1 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 34.229 34.625 4 0.048175 37026 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 17.546 10.664 35582000 0 0 0 0 0 12936000 0 0 3926900 0 0 4780800 0 0 13939000 43939 4292 39372 367800;367801;367802;367803 290597 290597 1 RIYIPLPEEAAR Unmodified 1426.7932 0.79324869 5026 Q9UN37 VPS4A Vacuolar protein sorting-associated protein 4A yes yes 0 0 1 By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 74.215 74.311 3 0.011634 85099 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.737 15.641 27713000 0 0 0 0 1695000 4206400 0 0 0 4111900 2796200 3646300 2998000 2053700 6205800 43940 5026 39373 367804;367805;367806;367807;367808;367809;367810;367811 290598 290598 1 RKAEEDAALQAK Unmodified 1328.7048 0.70482762 2289 Q13428 TCOF1 Treacle protein yes yes 0 0 2 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 11.202 10.212 3 0.0060251 8870 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 72.705 55.338 80290000 31358000 0 7287700 7497100 0 0 9011900 0 0 0 0 15328000 0 9807000 0 43941 2289 39374 367812;367813;367814;367815;367816;367817 290599;290600;290601;290602 290602 0 RKEELAEALK Unmodified 1185.6717 0.67173657 1332 P33991 MCM4 DNA replication licensing factor MCM4 yes yes 0 0 2 By MS/MS 2 0 1 1 33.297 27.261 3 0.012586 38191 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.692 45.463 44465000 44465000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43942 1332 39375 367818 290603 290603 0 RKEEQLSSYEDK Unmodified 1510.7264 0.72635092 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 15.584 15.811 3 0.00019372 15135 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 102.33 95.274 195650000 0 0 0 8089900 0 7315900 0 13247000 4011400 11917000 26918000 41467000 23522000 16938000 42222000 43943 3676 39376 367819;367820;367821;367822;367823;367824;367825;367826;367827;367828 290604;290605;290606 290606 2 RKEPSEISEASEEK Unmodified 1617.7846 0.78459408 245 O15047 SETD1A Histone-lysine N-methyltransferase SETD1A yes yes 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 20.276 16.567 3 0.0053547 23618 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.599 44.257 24173000 15414000 0 8758300 0 0 0 0 0 0 0 0 0 0 0 0 43944 245 39377 367829;367830 290607;290608 290607 2 RKGDEVDGVDEVAK Unmodified 1515.7529 0.75290002 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.8 3.92 8 12 4 1 3 1 1 1 1 1 1 1 1 1 1 1 1 24.263 22.923 2;3 2.1283E-06 33175 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 106.42 88.408 1233000000 209120000 8067700 364170000 27508000 26005000 51504000 44971000 46150000 23637000 56724000 51786000 98348000 71320000 63288000 90351000 43945 894 39378 367831;367832;367833;367834;367835;367836;367837;367838;367839;367840;367841;367842;367843;367844;367845;367846;367847;367848;367849;367850 290609;290610;290611;290612;290613;290614;290615;290616;290617;290618;290619;290620;290621;290622;290623;290624;290625 290614 9 RKGEMETESQPK Unmodified 1418.6824 0.68237762 3077 Q7Z309 FAM122B Protein FAM122B yes yes 0 0 2 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6.2641 5.9554 3 0.00064071 4419 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 89.189 77.725 478660000 296570000 0 11774000 10986000 12323000 5365100 17208000 13054000 6867800 12006000 21347000 19354000 13118000 13029000 25659000 43946 3077 39379 367851;367852;367853;367854;367855;367856;367857;367858;367859;367860;367861;367862;367863;367864 290626;290627;290628;290629;290630;290631;290632 290630 5 RKGEMETESQPK Oxidation (M) 1434.6773 0.67729224 3077 Q7Z309 FAM122B Protein FAM122B yes yes 0 1 2 By MS/MS 2 0 1 1 5.6284 2.251 3 0.0073954 5106 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.43 67.437 575920000 575920000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43947 3077 39379 367865 290633 290633 4689 1 RKLDPEIVPEEK Unmodified 1451.7984 0.79839365 296 O43148 RNMT mRNA cap guanine-N7 methyltransferase yes yes 0 0 2 By MS/MS 2 0 1 1 48.963 41.138 3 0.010424 57092 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.278 63.612 189410000 189410000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43948 296 39380 367866 290634 290634 1 RKLEEVLSTEGAEENGNSDK Unmodified 2204.0557 0.055683563 275 O15355 PPM1G Protein phosphatase 1G yes yes 0 0 2 By MS/MS 2 0 1 1 49.398 41.573 3 0.013465 57490 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 41.41 41.41 23168000 23168000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43949 275 39381 367867 290635 290635 1 RKMDETDASSAVK Oxidation (M) 1452.6879 0.68785692 2242 Q13148 TARDBP TAR DNA-binding protein 43 yes yes 0 1 2 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.7425 6.8661 3 4.0266E-11 5085 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 119.32 98.853 306580000 0 0 0 19501000 13535000 11024000 29904000 17210000 22692000 25668000 43722000 27667000 31540000 33227000 30890000 43950 2242 39382 367868;367869;367870;367871;367872;367873;367874;367875;367876;367877;367878;367879 290636;290637;290638;290639;290640;290641;290642;290643 290640 3643 8 RKPDTIEVQQMK Oxidation (M) 1487.7766 0.77661235 1198;1017;1345 P26038;P35241;P15311 MSN;RDX;EZR Moesin;Radixin;Ezrin no no 0 1 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 14.838 15.035 3 3.8636E-05 13576 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 104.59 99.451 431700000 0 0 0 0 6371600 0 19307000 0 0 15848000 80047000 0 24036000 52100000 233990000 43951 1198;1345;1017 39383 367880;367881;367882;367883;367884;367885;367886 290644;290645;290646 290644 1414 2 RKPDTIEVQQMK Unmodified 1471.7817 0.78169773 1198;1017;1345 P26038;P35241;P15311 MSN;RDX;EZR Moesin;Radixin;Ezrin no no 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 27.251 27.464 3 0.00020357 28498 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 75.088 67.543 319750000 0 0 0 12325000 7858600 10090000 0 7379200 7661100 7715100 36318000 50429000 9257600 26759000 143960000 43952 1198;1345;1017 39383 367887;367888;367889;367890;367891;367892;367893;367894;367895;367896;367897 290647;290648;290649;290650;290651 290651 4 RKPDYEPVENTDEAQK Unmodified 1917.9068 0.90683448 4534 Q9NP61 ARFGAP3 ADP-ribosylation factor GTPase-activating protein 3 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.358 22.562 3 1.4168E-18 23426 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 108.63 101.58 284280000 0 0 0 10913000 8828400 19387000 14642000 18765000 16722000 21926000 42074000 34868000 35626000 29615000 30910000 43953 4534 39384 367898;367899;367900;367901;367902;367903;367904;367905;367906;367907;367908;367909 290652;290653;290654;290655;290656;290657;290658;290659;290660;290661;290662;290663;290664;290665 290660 13 RKPNAGGSPAPVR Unmodified 1305.7266 0.72656611 2667 Q3KQU3 MAP7D1 MAP7 domain-containing protein 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.6384 7.7657 3 0.016131 6073 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 41.996 38.233 82159000 0 0 0 2814800 3400900 4415100 3946700 4614300 4465800 7823200 17394000 9940500 7788700 7292600 8262000 43954 2667 39385 367910;367911;367912;367913;367914;367915;367916;367917;367918;367919;367920;367921 290666;290667;290668;290669;290670;290671 290670 3 RKPSPEPEGEVGPPK Unmodified 1602.8366 0.83657007 3108 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 22.715 22.48 3 0.00010948 23174 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 79.346 62.6 232990000 36547000 0 0 7833300 4996500 13775000 8442900 10646000 11758000 18620000 29063000 27062000 20476000 17046000 26724000 43955 3108 39386 367922;367923;367924;367925;367926;367927;367928;367929;367930;367931;367932;367933;367934 290672;290673;290674;290675;290676;290677;290678;290679;290680 290675 5 RKPSTPLSEVIVK Unmodified 1452.8664 0.86641364 3621 Q92547 TOPBP1 DNA topoisomerase 2-binding protein 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 48.646 48.953 3 0.004791 55665 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 62.891 49.772 280110000 0 0 0 0 0 26193000 6469300 26006000 30269000 28166000 42719000 23182000 35435000 30887000 30788000 43956 3621 39387 367935;367936;367937;367938;367939;367940;367941;367942;367943;367944 290681;290682;290683;290684;290685 290682 5 RKQEEETAQLK Unmodified 1358.7154 0.7153923 42 B7ZAP0 RABGAP1L Rab GTPase-activating protein 1-like, isoform 10 yes yes 0 0 2 By MS/MS 2 0 1 1 10.765 6.8916 3 0.0028181 10976 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.839 73.83 18814000 18814000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43957 42 39388 367945 290686 290686 1 RKQEEQMETEQQNK Unmodified 1804.8374 0.83737471 505 O75475 PSIP1 PC4 and SFRS1-interacting protein yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6.3188 6.0127 3 4.0179E-71 4516 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 185.2 172.03 126540000 11747000 0 12294000 6275900 7035500 2167500 9658600 7358400 5117200 7276100 15949000 15856000 9368300 6938600 9493300 43958 505 39389 367946;367947;367948;367949;367950;367951;367952;367953;367954;367955;367956;367957;367958;367959 290687;290688;290689;290690;290691;290692;290693;290694;290695;290696;290697;290698;290699 290692 13 RKQEEQMETEQQNK Oxidation (M) 1820.8323 0.83228933 505 O75475 PSIP1 PC4 and SFRS1-interacting protein yes yes 0 1 2 By MS/MS 2 0 1 1 5.5935 2.2161 3 0.0010298 5077 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.035 55.151 22709000 22709000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43959 505 39389 367960 290700 290700 655 0 RKSELEFETLK Unmodified 1378.7456 0.7456298 2734 Q5JSH3 WDR44 WD repeat-containing protein 44 yes yes 0 0 2 By MS/MS 2 0 1 1 57.278 49.097 3 0.049505 67110 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.164 42.603 26676000 26676000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43960 2734 39390 367961 290701 290701 0 RLAAAQADMESSK Oxidation (M) 1392.6667 0.66672755 2634 Q16774 GUK1 Guanylate kinase yes yes 0 1 1 By MS/MS 2 0 1 1 14.347 10.299 2 1.2697E-09 15405 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 118.28 80.934 22112000 22112000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43961 2634 39391 367962 290702 290702 4288 1 RLAAAQADMESSK Unmodified 1376.6718 0.67181293 2634 Q16774 GUK1 Guanylate kinase yes yes 0 0 1 By MS/MS 2 0 1 1 27.592 22.204 3 0.017394 31604 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 29.912 13.38 98249000 98249000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43962 2634 39391 367963 290703 290703 1 RLAAQESSETEDMSVPR Unmodified 1904.8898 0.88980421 2840 Q641Q2 FAM21A WASH complex subunit FAM21A yes yes 0 0 1 By MS/MS 10 0 1 1 41.239 41.981 3 0.0029368 45848 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.52 29.732 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43963 2840 39392 367964 290704 290704 1 RLAAQFIPK Unmodified 1042.6287 0.62874955 4278 Q9BZZ5 API5 Apoptosis inhibitor 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.118 49.276 2 0.014813 54937 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 105.39 74.101 1117700000 0 0 0 37858000 45650000 135150000 75118000 58470000 91595000 87967000 127240000 114640000 90752000 78141000 175120000 43964 4278 39393 367965;367966;367967;367968;367969;367970;367971;367972;367973;367974;367975;367976 290705 290705 0 RLADSGDGAGPSPEEK Unmodified 1584.738 0.73797824 3686 Q92917 GPKOW G patch domain and KOW motifs-containing protein yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 17.487 17.35 3 0.011823 17630 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 46.156 36.025 2429900 0 0 0 2429900 0 0 0 0 0 0 0 0 0 0 0 43965 3686 39394 367977;367978 290706;290707 290706 2 RLAENSASSDDLLVAEVGISDYGDK Unmodified 2623.2613 0.26131924 1260 P30040 ERP29 Endoplasmic reticulum resident protein 29 yes yes 0 0 1 By MS/MS By MS/MS 2.25 0.433 3 1 3 1 85.612 80.028 2;3 1.2347E-126 82296 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 121.58 118.64 358630000 352960000 0 5661000 0 0 0 0 0 0 0 0 0 0 0 0 43966 1260 39395 367979;367980;367981;367982 290708;290709;290710;290711;290712;290713;290714;290715;290716 290710 9 RLAEQVSSYNESK Unmodified 1509.7423 0.74233534 3265 Q8IXQ4 GPALPP1 GPALPP motifs-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.55 3.09 2 9 2 1 1 1 1 1 1 1 1 1 27.31 26.356 2;3 0.0086045 38025 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.668 37.88 90942000 63639000 0 0 2561100 1810000 2577100 1729000 2231900 1778500 0 4730800 4820900 0 0 5064600 43967 3265 39396 367983;367984;367985;367986;367987;367988;367989;367990;367991;367992;367993 290717;290718;290719;290720;290721;290722;290723 290720 7 RLAESSVDLNLK Unmodified 1343.7409 0.74087877 644 O95352 ATG7 Ubiquitin-like modifier-activating enzyme ATG7 yes yes 0 0 1 By MS/MS 2 0 1 1 62.823 54.555 3 0.00060989 73487 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.676 50.099 29960000 29960000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43968 644 39397 367994 290724 290724 1 RLAETQEEISAEVAAK Unmodified 1743.9003 0.90029254 5141 Q9Y383 LUC7L2 Putative RNA-binding protein Luc7-like 2 yes yes 0 0 1 By MS/MS 2 0 1 1 54.848 50.95 3 0.00024346 63925 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 82.59 66.471 7515900 0 0 7515900 0 0 0 0 0 0 0 0 0 0 0 0 43969 5141 39398 367995 290725 290725 1 RLAGGDWFTSR Unmodified 1264.6313 0.63126874 1271 P30153 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes yes 0 0 1 By matching By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 57.557 57.734 3 0.050168 64919 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 20.84 6.7542 60975000 0 0 0 2567200 0 0 0 7490300 0 0 0 9733300 12544000 0 28640000 43970 1271 39399 367996;367997;367998;367999;368000 290726 290726 1 RLAHCEELR Unmodified 1182.5928 0.59277475 437 O60841 EIF5B Eukaryotic translation initiation factor 5B yes yes 0 0 1 By matching By MS/MS By matching By matching By matching By matching 10 0 6 1 1 1 1 1 1 12.913 13.116 3 0.029624 12682 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 29.743 12.27 21395000 0 0 0 0 0 2300900 1621000 0 2072900 0 3162400 0 5922100 0 6316100 43971 437 39400 368001;368002;368003;368004;368005;368006 290727 290727 1 RLAISEDHVASVK Unmodified 1423.7783 0.77832691 4505 Q9HC35 EML4 Echinoderm microtubule-associated protein-like 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.33 36.51 3 0.0015928 39846 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 40.315 26.726 68798000 0 0 0 2344700 1798700 5972000 3374200 2560700 4173800 6165600 7883600 9501100 5332900 6971600 12719000 43972 4505 39401 368007;368008;368009;368010;368011;368012;368013;368014;368015;368016;368017;368018 290728;290729;290730;290731;290732 290730 5 RLAPALALPAPALR Unmodified 1428.8929 0.89290316 904 P0CW18 PRSS56 Serine protease 56 yes yes 0 0 1 By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 79.663 79.805 3 0.033444 91868 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 24.425 19.51 38335000 0 0 0 0 0 5022900 1256600 2322500 2944500 2806900 2469900 5974800 2829600 2610300 10097000 43973 904 39402 368019;368020;368021;368022;368023;368024;368025;368026;368027;368028 290733 290733 1 RLAPEYEAAATR Unmodified 1346.6943 0.69426293 1270 P30101 PDIA3 Protein disulfide-isomerase A3 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.65 1.63 1 22 1 2 1 2 2 2 2 2 2 2 1 2 2 33.339 33.245 2;3 8.5006E-17 35133 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 145.01 112.49 970740000 81708000 0 0 32529000 8183800 27578000 44882000 49219000 31187000 44280000 118160000 122800000 28901000 98077000 283240000 43974 1270 39403 368029;368030;368031;368032;368033;368034;368035;368036;368037;368038;368039;368040;368041;368042;368043;368044;368045;368046;368047;368048;368049;368050;368051 290734;290735;290736;290737;290738;290739;290740;290741;290742;290743;290744;290745;290746;290747;290748;290749;290750;290751 290739 16 RLAPEYEAAATRLK Unmodified 1587.8733 0.87328993 1270 P30101 PDIA3 Protein disulfide-isomerase A3 yes yes 0 0 2 By MS/MS 2 0 1 1 58.342 50.137 3 0.029715 68093 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.599 44.216 70637000 70637000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43975 1270 39404 368052 290752 290752 1 RLAQDLVVEASDSK Unmodified 1529.8049 0.80493559 2086 Q03001 DST Dystonin yes yes 0 0 1 By MS/MS 2 0 1 1 62.053 53.797 3 0.012865 72720 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 29.077 15.941 9112500 9112500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43976 2086 39405 368053 290753 290753 1 RLASMATLLAR Unmodified 1201.6965 0.69651154 3941 Q96P11 NSUN5 Probable 28S rRNA (cytosine-C(5))-methyltransferase yes yes 0 0 1 By MS/MS 10 0 1 1 67.359 67.877 3 0.027498 77271 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 23.468 18.574 4151200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4151200 43977 3941 39406 368054 290754 290754 1 RLASPVAPGALTTPGGSAPAQVVHTQPPPR Unmodified 2929.5886 0.58862265 3915 Q96L91 EP400 E1A-binding protein p400 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 69.923 70.126 4 1.4379E-29 80008 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.101 65.272 74594000 0 0 0 0 0 9614200 5473500 8928300 0 10886000 6257300 9218200 5351500 6440000 12425000 43978 3915 39407 368055;368056;368057;368058;368059;368060;368061;368062;368063 290755;290756;290757;290758;290759;290760;290761;290762;290763;290764;290765 290758 11 RLASTSDIEEK Unmodified 1247.6357 0.635745 232 O14974 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 20.693 20.82 2 0.0020989 21346 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 105.4 58.199 77364000 0 0 0 6544100 6058800 0 7820400 0 7312600 0 19488000 0 17338000 12802000 0 43979 232 39408 368064;368065;368066;368067;368068;368069;368070 290766;290767;290768;290769;290770;290771;290772 290769 7 RLATEFELRK Unmodified 1261.7143 0.71427009 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.102 42.278 3 0.015456 45567 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.524 37.634 192160000 0 0 0 4511500 1712700 20359000 6795900 6985100 22926000 10524000 12894000 22299000 24838000 17464000 40852000 43980 19 39409 368071;368072;368073;368074;368075;368076;368077;368078;368079;368080;368081;368082 290773;290774;290775;290776;290777 290774 3 RLAWGQPVGLR Unmodified 1251.72 0.72002417 1528 P47897 QARS Glutamine--tRNA ligase yes yes 0 0 1 By MS/MS 10 0 1 1 62.385 62.958 3 0.022022 71259 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.254 21.041 6324600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6324600 43981 1528 39410 368083 290778 290778 1 RLCAAAASILGK Unmodified 1229.6914 0.69142616 1264 P30046;A6NHG4 DDT;DDTL D-dopachrome decarboxylase;D-dopachrome decarboxylase-like protein yes no 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 54.744 55.161 2 0.0082148 61473 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.349 34.158 23596000 0 0 0 0 0 0 0 0 0 0 0 0 0 2021900 21574000 43982 1264 39411 368084;368085 290779;290780 290779 1 RLCENIAGHLK Unmodified 1309.6925 0.69248879 768 P04040 CAT Catalase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 34.634 34.837 3 0.0041195 37014 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 37.144 13.768 38289000 0 0 0 11941000 0 0 0 2531800 2720400 0 0 8729200 9818600 2547300 0 43983 768 39412 368086;368087;368088;368089;368090;368091 290781;290782;290783;290784 290783 4 RLDAEEAEIR Unmodified 1200.6099 0.6098646 2808 Q5VT06 CEP350 Centrosome-associated protein 350 yes yes 0 0 1 By MS/MS 10 0 1 1 7.3813 7.2537 3 0.042272 5431 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 22.641 0.16697 1964000 0 0 0 1964000 0 0 0 0 0 0 0 0 0 0 0 43984 2808 39413 368092 290785 290785 1 RLDDVSNDVR Unmodified 1187.5895 0.58946351 3204 Q86Y56 DNAAF5 Dynein assembly factor 5, axonemal yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 24.743 24.947 2;3 0.015314 25132 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 99.283 61.637 260000000 0 0 0 16317000 18994000 24418000 18502000 30130000 14708000 22103000 17646000 26554000 21488000 16443000 32698000 43985 3204 39414 368093;368094;368095;368096;368097;368098;368099;368100;368101;368102;368103;368104;368105;368106;368107;368108;368109;368110;368111;368112;368113;368114;368115;368116 290786;290787;290788 290786 2 RLDECEEAFQGTK Unmodified 1581.7093 0.70932065 1844 P61289 PSME3 Proteasome activator complex subunit 3 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 34.834 35.146 3 0.021201 38845 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 38.511 25.098 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43986 1844 39415 368117;368118 290789;290790 290789 2 RLDEDLAAYCR Unmodified 1380.6456 0.64559818 888 P09543 CNP 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes yes 0 0 1 By MS/MS By matching By MS/MS 10 0 3 1 1 1 48.942 49.449 3 0.00071824 54868 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.175 38.55 73469000 0 0 0 0 0 18910000 0 0 0 0 0 26102000 0 0 28457000 43987 888 39416 368119;368120;368121 290791;290792 290792 1 RLDEEEEDNEGGEWER Unmodified 1990.8141 0.81405631 4033 Q99613 EIF3C Eukaryotic translation initiation factor 3 subunit C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 37.287 37.526 3 0.00086224 40398 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 47.113 44.015 80781000 0 0 0 7034100 0 8466000 2501800 4566400 3825700 6095400 10571000 11823000 7897300 5555000 12445000 43988 4033 39417 368122;368123;368124;368125;368126;368127;368128;368129;368130;368131;368132 290793;290794;290795;290796;290797 290795 5 RLDEELEDAEK Unmodified 1345.6361 0.63613893 2471 Q15008 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.83 3.5 8 2 26 4 4 2 3 2 1 1 2 2 3 3 3 1 2 3 39.929 38.942 2;3 1.9853E-106 43195 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 215.08 164.01 1652100000 452190000 180100000 40145000 56737000 70308000 68807000 14659000 23192000 24963000 139580000 196400000 229750000 21106000 27852000 106340000 43989 2471 39418 368133;368134;368135;368136;368137;368138;368139;368140;368141;368142;368143;368144;368145;368146;368147;368148;368149;368150;368151;368152;368153;368154;368155;368156;368157;368158;368159;368160;368161;368162;368163;368164;368165;368166;368167;368168 290798;290799;290800;290801;290802;290803;290804;290805;290806;290807;290808;290809;290810;290811;290812;290813;290814;290815;290816;290817;290818;290819;290820 290809 11 RLDINTNTYTSQDLK Unmodified 1780.8955 0.89554151 4344 Q9H173 SIL1 Nucleotide exchange factor SIL1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.6 3.67 3 7 2 1 1 1 1 1 1 1 1 56.459 55.359 2;3 0.00043003 62078 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.281 42.638 73352000 21435000 0 7822000 0 0 3104100 10503000 0 0 6351500 5325600 7112100 0 4069100 7629800 43990 4344 39419 368169;368170;368171;368172;368173;368174;368175;368176;368177;368178 290821;290822;290823;290824;290825;290826;290827;290828;290829;290830 290824 9 RLDIQEALK Unmodified 1084.6241 0.6240581 3856 Q96GM5 SMARCD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 yes yes 0 0 1 By MS/MS 2 0 1 1 64.193 55.914 2 0.013355 75261 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 111.46 21.757 56063000 56063000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43991 3856 39420 368179 290831 290831 0 RLDLDAAK Unmodified 900.50288 0.50288033 5139 Q9Y371 SH3GLB1 Endophilin-B1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 24.835 25.151 2 0.030959 26752 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 108.74 46.025 814090000 0 0 0 0 0 67629000 60525000 69411000 0 110140000 65568000 110440000 148370000 80700000 101300000 43992 5139 39421 368180;368181;368182;368183;368184;368185;368186;368187;368188 290832;290833 290832 0 RLDQCPESPLQR Unmodified 1497.7358 0.73581017 2781 Q5T749 KPRP Keratinocyte proline-rich protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 2 2 1 2 2 2 2 2 2 37.23 37.358 2;3 1.4394E-16 42066 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 143.96 120.64 764280000 0 0 0 339480000 29228000 38440000 50023000 3411000 21825000 51352000 39705000 46558000 119330000 24925000 0 43993 2781 39422 368189;368190;368191;368192;368193;368194;368195;368196;368197;368198;368199;368200;368201;368202;368203;368204;368205;368206;368207;368208;368209 290834;290835;290836;290837;290838 290838 3 RLDQELDFILSQQK Unmodified 1731.9155 0.91554867 1387 P37198 NUP62 Nuclear pore glycoprotein p62 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 5 3.56 1 1 1 1 1 1 88.549 84.828 3 0.00013132 98437 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.344 64.616 12426000 4742400 1873800 0 0 0 0 0 0 0 0 0 0 0 0 5810200 43994 1387 39423 368210;368211;368212 290839;290840;290841 290839 3 RLDQVEQELNELRETEGGTVLTATTSELEAINK Unmodified 3685.8646 0.8646419 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 0 2 By MS/MS 2 0 1 1 98.242 90.112 4 4.1834E-10 116123 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.942 40.877 81885000 81885000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43995 5071 39424 368213 290842 290842 1 RLDSSACLHAVGDK Unmodified 1527.7464 0.74637486 588 O94808 GFPT2 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 yes yes 0 0 1 By MS/MS 2 0 1 1 38.008 31.51 3 0.00056489 43749 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.932 70.99 57766000 57766000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43996 588 39425 368214 290843 290843 1 RLDYITAEIK Unmodified 1220.6765 0.6764876 264 O15212 PFDN6 Prefoldin subunit 6 yes yes 0 0 1 By MS/MS By MS/MS 2 0 5 2 3 66.784 61.216 2;3 0.0083025 82440 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.408 40.036 391950000 362870000 0 29075000 0 0 0 0 0 0 0 0 0 0 0 0 43997 264 39426 368215;368216;368217;368218;368219 290844;290845;290846;290847;290848 290845 3 RLEAAYLDLQR Unmodified 1346.7306 0.73064844 482 O75347 TBCA Tubulin-specific chaperone A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 60.758 61.169 2 0.0026038 69099 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.403 51.317 44314000 0 0 0 0 0 0 0 0 0 0 4704900 9303200 0 3778500 26527000 43998 482 39427 368220;368221;368222;368223 290849;290850 290849 2 RLEAEDYLK Unmodified 1135.5873 0.58733824 4024 Q99570 PIK3R4 Phosphoinositide 3-kinase regulatory subunit 4 yes yes 0 0 1 By MS/MS 2 0 1 1 50.855 46.934 2 0.031387 59086 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 89.047 51.489 20613000 0 0 20613000 0 0 0 0 0 0 0 0 0 0 0 0 43999 4024 39428 368224 290851 290851 1 RLEAELAAHEPAIQGVLDTGK Unmodified 2217.1753 0.17534519 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS By MS/MS 2.43 0.728 1 2 4 4 3 85.148 82.04 3;4 6.5387E-73 95586 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 119.34 104.25 90794000 40493000 50301000 0 0 0 0 0 0 0 0 0 0 0 0 0 44000 2344 39429 368225;368226;368227;368228;368229;368230;368231 290852;290853;290854;290855;290856;290857 290856 4 RLEAEQAR Unmodified 971.51484 0.514842 2398 Q14244 MAP7 Ensconsin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 6.7812 6.9038 2 0.048229 4645 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 105.1 34.576 118250000 0 0 0 9459700 13323000 9148100 11851000 10088000 11628000 8739300 15617000 0 8212800 7167900 13021000 44001 2398 39430 368232;368233;368234;368235;368236;368237;368238;368239;368240;368241;368242 290858;290859 290859 1 RLEAFEHPNVVR Unmodified 1465.779 0.77899561 956 P11802 CDK4 Cyclin-dependent kinase 4 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 44.983 45.459 3 0.0017454 49481 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.343 43.238 72640000 0 0 0 0 0 0 0 8371900 0 0 0 22711000 0 889880 40667000 44002 956 39431 368243;368244;368245;368246 290860;290861;290862 290861 3 RLEAFLTQK Unmodified 1104.6291 0.62914348 1373;2079 P36507;Q02750 MAP2K2;MAP2K1 Dual specificity mitogen-activated protein kinase kinase 2;Dual specificity mitogen-activated protein kinase kinase 1 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.248 48.41 2 0.027065 53791 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 113.71 31.035 923030000 0 0 0 47795000 24943000 167360000 45926000 47737000 44949000 90018000 76903000 83387000 105420000 57918000 130670000 44003 1373;2079 39432 368247;368248;368249;368250;368251;368252;368253;368254;368255;368256;368257;368258 290863;290864;290865;290866;290867;290868;290869;290870;290871;290872;290873 290871 10 RLEEALMADMLAHVEELARDGEAPLDK Unmodified 3021.49 0.48995574 707 O95983 MBD3 Methyl-CpG-binding domain protein 3 yes yes 0 0 2 By MS/MS 2 0 1 1 101.31 93.184 4 2.281E-39 119942 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 102.53 94.453 14839000 14839000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44004 707 39433 368259 290874;290875 290875 2 RLEEASLLHQFQADADDIDAWMLDILK Unmodified 3155.5597 0.55974987 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS 2 0 1 1 104.48 96.35 4 3.3856E-21 123739 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.881 78.039 5167000 5167000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44005 2047 39434 368260 290876 290876 1 RLEEEGDRVITYLDHSTQK Unmodified 2288.1397 0.13968796 2331 Q13619 CUL4A Cullin-4A yes yes 0 0 2 By MS/MS 2 0 1 1 76.912 68.781 4 2.9286E-07 90628 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 91.622 69.514 21451000 21451000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44006 2331 39435 368261 290877 290877 1 RLEEETEYLNSQLEDAIRLK Unmodified 2448.2496 0.24963234 3495 Q8TD16 BICD2 Protein bicaudal D homolog 2 yes yes 0 0 2 By MS/MS 2 0 1 1 90.353 82.223 4 0.00092584 106710 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 44.089 36.097 7561800 7561800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44007 3495 39436 368262 290878 290878 1 RLEEFEGERER Unmodified 1448.7008 0.70080487 2155 Q08378 GOLGA3 Golgin subfamily A member 3 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.804 24.009 3 0.011139 24167 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.456 43.78 48117000 0 0 0 1869500 1245100 3206300 2157500 2695700 3347200 2784600 4163000 5383700 5687300 5353600 10224000 44008 2155 39437 368263;368264;368265;368266;368267;368268;368269;368270;368271;368272;368273;368274 290879 290879 0 RLEEGTEETSETLEK Unmodified 1749.8269 0.82685283 2155 Q08378 GOLGA3 Golgin subfamily A member 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.407 30.585 3 9.5379E-15 32663 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 78.326 71.919 96801000 0 0 0 3489200 5772500 7955000 5946900 5299300 5674600 7848300 7665400 16051000 11243000 0 19855000 44009 2155 39438 368275;368276;368277;368278;368279;368280;368281;368282;368283;368284;368285;368286 290880;290881;290882;290883;290884;290885;290886;290887;290888;290889;290890;290891;290892 290890 13 RLEEIPLIK Unmodified 1109.6808 0.6808447 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 74.592 68.886 2 0.027243 90653 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 99.136 7.8175 324080000 305650000 0 18426000 0 0 0 0 0 0 0 0 0 0 0 0 44010 2378 39439 368287;368288 290893 290893 1 RLEELEAK Unmodified 986.53966 0.53965977 437 O60841 EIF5B Eukaryotic translation initiation factor 5B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.23 3.24 2 1 10 2 1 1 1 1 1 1 1 1 1 1 1 22.208 21.469 2 0.0078072 21915 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 127.46 48.011 551610000 0 88045000 124040000 22890000 23829000 0 39905000 23434000 22581000 38455000 51230000 0 41136000 24778000 51283000 44011 437 39440 368289;368290;368291;368292;368293;368294;368295;368296;368297;368298;368299;368300;368301 290894;290895;290896;290897;290898 290897 2 RLEELQLANSAK Unmodified 1370.7518 0.75177781 2302 Q13496 MTM1 Myotubularin yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 54.389 48.338 3 0.022908 66649 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.115 34.567 38068000 34346000 0 3721600 0 0 0 0 0 0 0 0 0 0 0 0 44012 2302 39441 368302;368303 290899;290900 290899 1 RLEENDDDAYLNSPWADNTALK Unmodified 2549.167 0.16702493 1790 P57076 C21orf59 UPF0769 protein C21orf59 yes yes 0 0 1 By MS/MS 2 0 1 1 78.973 76.345 3 0.0072178 92771 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 36.246 28.713 9798000 0 0 9798000 0 0 0 0 0 0 0 0 0 0 0 0 44013 1790 39442 368304 290901 290901 0 RLEEPEEPK Unmodified 1125.5666 0.5666028 547 O75822 EIF3J Eukaryotic translation initiation factor 3 subunit J yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 20.438 19.591 2 0.012044 24412 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 125.82 87.026 1302200000 175880000 375330000 320200000 21739000 16968000 28418000 21420000 24128000 17241000 37015000 57920000 54451000 33953000 36038000 81514000 44014 547 39443 368305;368306;368307;368308;368309;368310;368311;368312;368313;368314;368315;368316;368317;368318;368319;368320 290902;290903;290904;290905 290902 2 RLEEPSLR Unmodified 998.55089 0.55089316 154 O00429 DNM1L Dynamin-1-like protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 30.745 30.982 2 0.037173 32649 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 106.68 22.185 201570000 0 0 0 0 9591700 25099000 12176000 10659000 11344000 20775000 14749000 28168000 20983000 16985000 31039000 44015 154 39444 368321;368322;368323;368324;368325;368326;368327;368328;368329;368330;368331 290906 290906 0 RLEEQAAQHK Unmodified 1208.6262 0.62618337 2501 Q15149 PLEC Plectin yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 5.9232 6.0585 3 0.0066014 3791 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 39.918 26.962 55753000 0 0 0 0 2735800 4863800 6567100 4558600 4455000 0 2042200 12520000 6146200 2887400 8976200 44016 2501 39445 368332;368333;368334;368335;368336;368337;368338;368339;368340;368341 290907;290908 290907 2 RLEESDVLQEAR Unmodified 1443.7318 0.73177065 346 O43615 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 45.195 45.365 2;3 1.2249E-30 50943 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 158.04 114.36 995540000 0 0 0 38828000 60481000 74035000 75278000 84315000 65590000 76891000 95840000 133060000 108350000 70433000 112440000 44017 346 39446 368342;368343;368344;368345;368346;368347;368348;368349;368350;368351;368352;368353;368354;368355;368356;368357;368358;368359;368360;368361;368362;368363;368364;368365 290909;290910;290911;290912;290913;290914;290915;290916;290917;290918;290919;290920;290921;290922;290923;290924;290925;290926;290927;290928;290929 290912 14 RLEESLDALPR Unmodified 1297.699 0.69901396 3008 Q6ZS17 FAM65A Protein FAM65A yes yes 0 0 1 By matching By matching By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 56.498 56.565 3 0.00030046 63764 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.121 47.966 15660000 0 0 0 2533700 0 3753100 0 0 2963700 668030 0 0 0 0 5741400 44018 3008 39447 368366;368367;368368;368369;368370;368371 290930;290931 290930 2 RLEFENQK Unmodified 1062.5458 0.54580778 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22.372 21.68 2 0.0082856 22133 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 133.68 70.201 472560000 147660000 7361700 24708000 15965000 14293000 23391000 18094000 17011000 14936000 26973000 33721000 40974000 25018000 25777000 36669000 44019 2431 39448 368372;368373;368374;368375;368376;368377;368378;368379;368380;368381;368382;368383;368384;368385;368386 290932;290933;290934;290935;290936;290937;290938;290939 290939 2 RLEFPSGETIVMHNPK Oxidation (M) 1869.9407 0.94071757 5301 Q9Y6Y8 SEC23IP SEC23-interacting protein yes yes 0 1 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 59.242 59.36 3 0.00030371 68078 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 52.372 42.272 71013000 0 0 0 4471800 0 7322200 6882400 0 0 0 8334800 0 8605400 7432100 27965000 44020 5301 39449 368387;368388;368389;368390;368391;368392;368393 290940;290941;290942 290942 6707 3 RLEFPSGETIVMHNPK Unmodified 1853.9458 0.94580295 5301 Q9Y6Y8 SEC23IP SEC23-interacting protein yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 66.825 67.293 3 0.00011097 76382 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.943 55.662 29801000 0 0 0 0 0 0 0 0 0 0 0 4100400 0 0 25701000 44021 5301 39449 368394;368395 290943;290944 290943 1 RLEIEHSVPK Unmodified 1206.6721 0.67207093 4768 Q9NZI8 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 31.444 31.062 3 0.010648 32354 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 42.21 23.43 119460000 26159000 0 0 0 0 7396400 9595400 0 7759700 10582000 9759400 11402000 10071000 13902000 12831000 44022 4768 39450 368396;368397;368398;368399;368400;368401;368402;368403;368404;368405 290945;290946;290947;290948 290947 3 RLEQLGAQR Unmodified 1069.5992 0.59924033 1039 P16435 POR NADPH--cytochrome P450 reductase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 18.594 18.97 2 0.016121 19383 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 107.69 31.216 211580000 0 0 0 0 0 0 0 24646000 0 39610000 25986000 41441000 29990000 20781000 29131000 44023 1039 39451 368406;368407;368408;368409;368410;368411;368412 290949;290950 290950 0 RLEQLHGELR Unmodified 1249.6891 0.68911797 2938 Q6P5Z2 PKN3 Serine/threonine-protein kinase N3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 28.246 28.677 3 0.024998 31111 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 29.299 19.861 31206000 0 0 0 0 0 9117600 0 0 0 0 0 5969100 10578000 0 5541300 44024 2938 39452 368413;368414;368415;368416 290951;290952;290953 290952 3 RLETHDVVIECAK Unmodified 1568.7981 0.79807608 3629 Q92574 TSC1 Hamartin yes yes 0 0 1 By MS/MS 2 0 1 1 44.869 38.003 3 0.0038273 52180 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 59.709 23.935 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44025 3629 39453 368417 290954 290954 1 RLETPEPGQQGLQAAAR Unmodified 1820.9493 0.94930842 4127 Q9BSJ6 FAM64A Protein FAM64A yes yes 0 0 1 By MS/MS By MS/MS By matching By matching 10 0 4 1 1 1 1 44.91 45.287 3 0.00033436 50674 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 51.495 40.551 23003000 0 0 0 0 0 0 4406900 0 0 0 6287600 7241100 0 5067800 0 44026 4127 39454 368418;368419;368420;368421 290955;290956 290956 2 RLEVEREAEK Unmodified 1257.6677 0.66771383 3738 Q96AG4 LRRC59 Leucine-rich repeat-containing protein 59 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.861 14.023 3 0.037076 12582 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 57.836 32.399 183650000 0 0 0 11698000 12153000 10049000 12163000 10791000 12477000 21166000 15301000 27480000 17861000 11869000 20641000 44027 3738 39455 368422;368423;368424;368425;368426;368427;368428;368429;368430;368431;368432;368433 290957;290958;290959;290960 290959 0 RLFEGNALLR Unmodified 1187.6775 0.67749065 1511 P46781 RPS9 40S ribosomal protein S9 yes yes 0 0 1 By matching By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 62.355 62.677 3 0.0018252 70469 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.359 36.597 15963000 0 0 0 0 0 0 0 2959200 0 0 0 3391000 2962800 2727400 3922900 44028 1511 39456 368434;368435;368436;368437;368438 290961;290962;290963 290961 3 RLGAAALVPEAQDSQVTSTK Unmodified 2041.0804 0.080382171 3375 Q8N9M1 C19orf47 Uncharacterized protein C19orf47 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 59.699 58.922 3 0.00035497 66956 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 43.164 39.302 36335000 6813400 0 0 0 1821100 0 3542000 4866700 0 3828600 3425700 0 3423600 2942500 5671900 44029 3375 39457 368439;368440;368441;368442;368443;368444;368445;368446;368447 290964;290965;290966;290967;290968;290969;290970;290971;290972;290973 290969 10 RLGAGEQDAEEIK Unmodified 1414.7052 0.70522155 2938 Q6P5Z2 PKN3 Serine/threonine-protein kinase N3 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 27.52 27.453 3 1.5627E-10 28872 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 94.688 88.281 146610000 0 0 3469200 6899000 10387000 11602000 9971300 14523000 8712400 11167000 16854000 13108000 13368000 7594400 18958000 44030 2938 39458 368448;368449;368450;368451;368452;368453;368454;368455;368456;368457;368458;368459;368460 290974;290975;290976;290977;290978;290979;290980;290981;290982;290983;290984;290985 290984 12 RLGASLAFNNIYR Unmodified 1493.8103 0.81029574 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 1 By MS/MS 10 0 1 1 71.805 72.208 3 0.00031744 82520 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.277 40.366 8381900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8381900 44031 1986 39459 368461 290986 290986 1 RLGCEEMEGYGPLK Unmodified 1637.7542 0.75416235 292 O15530;Q6A1A2 PDPK1;PDPK2P 3-phosphoinositide-dependent protein kinase 1;Putative 3-phosphoinositide-dependent protein kinase 2 yes no 0 0 1 By MS/MS 2 0 1 1 66.084 57.789 3 0.02133 77478 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 22.855 10.879 8106200 8106200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44032 292 39460 368462 290987 290987 1 RLGDLQADSEESQR Unmodified 1602.7598 0.75977631 3639 Q92614 MYO18A Unconventional myosin-XVIIIa yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 30.015 29.913 3 0.0082624 32414 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 33.547 26.917 12821000 0 0 0 2469300 2408200 3655000 2470000 1819000 0 0 0 0 0 0 0 44033 3639 39461 368463;368464;368465;368466;368467 290988;290989 290989 2 RLGELPADHPK Unmodified 1231.6673 0.6673199 2603 Q16512 PKN1 Serine/threonine-protein kinase N1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 25.787 25.961 3 0.0010078 26015 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.252 34.998 78465000 0 0 0 4878100 6073500 0 7904400 8766300 5790200 5869100 0 17973000 0 7285900 13924000 44034 2603 39462 368468;368469;368470;368471;368472;368473;368474;368475;368476 290990;290991;290992;290993;290994 290992 5 RLGFITNNSSK Unmodified 1235.6622 0.66223452 23 A6NDG6 PGP Phosphoglycolate phosphatase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 2 2 2 2 35.076 35.636 2;3 0.0031077 37863 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.298 38.875 129470000 0 0 0 0 0 0 0 0 0 0 18591000 22810000 0 16774000 71297000 44035 23 39463 368477;368478;368479;368480;368481;368482;368483;368484 290995;290996;290997 290995 3 RLGLPGDEVDNK Unmodified 1311.6783 0.67827852 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.08 3.75 10 4 23 6 6 2 1 2 2 2 2 2 2 2 2 2 2 2 43.855 42.298 2;3 2.3886E-22 47134 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 171.87 118.1 3012900000 777500000 231480000 462790000 93990000 79641000 122480000 98727000 109360000 83916000 148060000 138090000 195800000 127480000 126580000 217030000 44036 1986 39464 368485;368486;368487;368488;368489;368490;368491;368492;368493;368494;368495;368496;368497;368498;368499;368500;368501;368502;368503;368504;368505;368506;368507;368508;368509;368510;368511;368512;368513;368514;368515;368516;368517;368518;368519;368520;368521 290998;290999;291000;291001;291002;291003;291004;291005;291006;291007;291008;291009;291010;291011;291012;291013;291014;291015;291016;291017;291018;291019;291020;291021;291022;291023;291024;291025;291026;291027;291028;291029 291002 21 RLGPGGLDPVEVYESLPEELQK Unmodified 2424.2537 0.25365509 2612 Q16543 CDC37 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 3.22 2.44 5 3 1 3 4 1 1 94.966 90.72 2;3 7.9936E-85 113783 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 184.41 159.48 759350000 602980000 149010000 3854500 0 0 0 0 0 0 0 0 0 0 0 3506200 44037 2612 39465 368522;368523;368524;368525;368526;368527;368528;368529;368530 291030;291031;291032;291033;291034;291035;291036;291037;291038 291038 9 RLGSLVDEFK Unmodified 1162.6346 0.63462279 973 P12956 XRCC6 X-ray repair cross-complementing protein 6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.65 1.63 1 22 1 2 2 2 2 2 2 3 2 3 2 64.179 64.056 2;3 0.0097614 89505 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.63 38.489 503960000 57735000 0 0 0 0 45743000 13349000 25508000 28917000 29372000 24751000 57492000 25986000 39438000 155670000 44038 973 39466 368531;368532;368533;368534;368535;368536;368537;368538;368539;368540;368541;368542;368543;368544;368545;368546;368547;368548;368549;368550;368551;368552;368553 291039;291040;291041;291042;291043;291044;291045 291042 4 RLGTNQENQQPNQQPPGK Unmodified 2033.0039 0.0038631846 631 O95235 KIF20A Kinesin-like protein KIF20A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 16.809 16.988 3 0.0001375 17614 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 44.998 39.339 39560000 0 0 0 1790400 2324400 4476500 2467100 2547000 2854800 3298800 4488500 4932300 4089000 2608100 3683300 44039 631 39467 368554;368555;368556;368557;368558;368559;368560;368561;368562;368563;368564;368565;368566 291046;291047;291048;291049;291050;291051;291052;291053;291054;291055;291056;291057;291058;291059 291046 14 RLHGLDEEAEQK Unmodified 1423.7056 0.7055559 1332 P33991 MCM4 DNA replication licensing factor MCM4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.12 3.72 4 2 10 3 2 1 1 1 1 1 2 1 1 1 1 21.971 20.493 2;3 7.5653E-06 31600 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.65 89.55 446290000 161560000 39025000 15316000 22907000 0 22769000 0 11071000 16439000 0 16533000 34000000 19126000 19577000 67964000 44040 1332 39468 368567;368568;368569;368570;368571;368572;368573;368574;368575;368576;368577;368578;368579;368580;368581;368582 291060;291061;291062;291063;291064;291065;291066;291067;291068;291069;291070;291071;291072;291073;291074;291075;291076;291077;291078 291070 18 RLHNTIVEINNHK Unmodified 1586.8641 0.86412223 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 0 1 By MS/MS 10 0 2 2 28.532 29.227 3;4 0.0077155 30576 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.105 42.124 73264000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 73264000 44041 4634 39469 368583;368584 291079;291080;291081 291081 2 RLHTLEEVNNNVR Unmodified 1592.8383 0.83830141 4760 Q9NZ52 GGA3 ADP-ribosylation factor-binding protein GGA3 yes yes 0 0 1 By MS/MS By matching 10 0 2 1 1 33.952 34.313 3 0.0098015 38271 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 30.308 17.328 14119000 0 0 0 0 0 10840000 0 0 0 0 0 0 0 0 3278600 44042 4760 39470 368585;368586 291082 291082 1 RLIDLHSPSEIVK Unmodified 1505.8566 0.85657723 1817 P60866 RPS20 40S ribosomal protein S20 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 66.5 64.137 3 1.0291E-05 70612 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.262 69.223 153220000 8450600 0 0 0 0 0 0 0 0 0 0 32893000 0 0 111880000 44043 1817 39471 368587;368588;368589;368590 291083;291084;291085;291086 291083 4 RLIDSSGSASVLTHSSSGNSLK Unmodified 2202.124 0.1240379 3995 Q96SU4 OSBPL9 Oxysterol-binding protein-related protein 9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 3 1 2 1 1 2 1 1 49.726 50.054 3;4 1.4672E-44 56591 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 107.06 88.602 205130000 0 0 0 0 0 18665000 23821000 36285000 10272000 6922900 0 64959000 26252000 0 17948000 44044 3995 39472 368591;368592;368593;368594;368595;368596;368597;368598;368599;368600;368601;368602 291087;291088;291089;291090;291091;291092;291093;291094;291095 291088 8 RLIFSTITSK Unmodified 1164.6867 0.68665836 1482 P43686 PSMC4 26S protease regulatory subunit 6B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 58.76 59.04 2 2.4197E-06 66332 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 133.81 91.209 292680000 0 0 0 0 0 52884000 0 10867000 11369000 40020000 45650000 88633000 8781600 0 34478000 44045 1482 39473 368603;368604;368605;368606;368607;368608;368609;368610 291096;291097 291097 1 RLIPDGCGVK Unmodified 1113.5965 0.59646314 1220 P27635 RPL10 60S ribosomal protein L10 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 34.869 34.516 2 1.5406E-09 37758 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 147.2 95.345 672540000 121650000 0 0 25254000 22696000 29977000 27839000 28786000 37663000 34065000 63149000 81887000 68712000 68874000 61985000 44046 1220 39474 368611;368612;368613;368614;368615;368616;368617;368618;368619;368620;368621;368622;368623 291098;291099;291100;291101;291102;291103;291104;291105;291106;291107;291108 291101 8 RLIPNATGTGTFSPGASPGSEAR Unmodified 2243.1295 0.12945763 2603 Q16512 PKN1 Serine/threonine-protein kinase N1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 60.372 60.681 3 2.8272E-05 68578 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.841 35.849 22268000 0 0 0 0 0 0 2810300 0 0 4195000 0 5704600 4255900 0 5301900 44047 2603 39475 368624;368625;368626;368627;368628 291109;291110;291111;291112 291110 3 RLISENSVYEK Unmodified 1336.6987 0.69867961 2234 Q13111 CHAF1A Chromatin assembly factor 1 subunit A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 2 1 1 1 1 35.121 34.804 2;3 1.2806E-08 50085 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 138.45 90.58 169300000 68622000 0 0 2688500 2410600 0 4485700 3270500 4916700 6611700 40780000 8277300 6119600 4938000 16181000 44048 2234 39476 368629;368630;368631;368632;368633;368634;368635;368636;368637;368638;368639;368640;368641 291113;291114;291115;291116;291117 291115 4 RLITGASDSELR Unmodified 1316.7048 0.70482762 5044 Q9UNX4 WDR3 WD repeat-containing protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 35.655 35.94 3 0.019805 38811 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 30.998 20.092 13888000 0 0 0 0 0 2386500 2644800 0 0 0 0 5149000 3708200 0 0 44049 5044 39477 368642;368643;368644;368645 291118 291118 1 RLIVDVIR Unmodified 982.62875 0.62874955 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 60.827 60.989 2 0.0071341 69604 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 160.88 76.636 709850000 0 0 0 55270000 0 81014000 39173000 35479000 57967000 60620000 43649000 101950000 56487000 47872000 130370000 44050 1518 39478 368646;368647;368648;368649;368650;368651;368652;368653;368654;368655;368656 291119;291120;291121;291122 291120 0 RLKPDPEPDDK Unmodified 1308.6674 0.66737948 4308 Q9GZU8 FAM192A Protein FAM192A yes yes 0 0 2 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.24 2.35 2 19 1 1 1 2 1 2 1 2 2 1 2 1 2 2 12.314 12.14 2;3 0.0033757 11515 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 101.39 83.655 716110000 427680000 0 7123800 9561500 10441000 14078000 13624000 12288000 13139000 22620000 21973000 56106000 25112000 25709000 56649000 44051 4308 39479 368657;368658;368659;368660;368661;368662;368663;368664;368665;368666;368667;368668;368669;368670;368671;368672;368673;368674;368675;368676;368677 291123;291124;291125;291126;291127;291128;291129;291130;291131;291132;291133;291134;291135;291136 291136 8 RLLDQIVEK Unmodified 1112.6554 0.65535823 3737 Q96AE4 FUBP1 Far upstream element-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53.298 52.413 2 0.015627 58793 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 104.01 43.424 2046200000 303300000 11942000 0 58731000 48741000 129790000 94999000 81072000 114420000 136940000 188390000 194880000 122580000 142240000 418200000 44052 3737 39480 368678;368679;368680;368681;368682;368683;368684;368685;368686;368687;368688;368689;368690;368691 291137;291138;291139;291140 291140 0 RLLDYSLHK Unmodified 1143.64 0.64004252 4134 Q9BT09 CNPY3 Protein canopy homolog 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 6 1 1 1 1 1 1 42.455 42.804 3 0.010156 47994 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 47.706 19.009 65316000 0 0 0 0 0 8714900 3598000 0 9690700 0 0 11861000 9323800 0 22128000 44053 4134 39481 368692;368693;368694;368695;368696;368697 291141;291142 291141 2 RLLEEANK Unmodified 971.53999 0.53999412 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 14.361 14.549 2 0.0069101 14121 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 129.72 42.928 314180000 0 0 0 0 19793000 23366000 19066000 25522000 20222000 32103000 32912000 30388000 39501000 28674000 42628000 44054 2556 39482 368698;368699;368700;368701;368702;368703;368704;368705;368706;368707;368708 291143;291144;291145 291145 0 RLLEFNQGK Unmodified 1103.6087 0.60874239 1440 P41250 GARS Glycine--tRNA ligase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.963 40.142 2 0.0029429 43749 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 128.86 79.435 233690000 0 0 0 9053600 4802600 20407000 11233000 9107000 8593400 13062000 24049000 28044000 17311000 25163000 62862000 44055 1440 39483 368709;368710;368711;368712;368713;368714;368715;368716;368717;368718;368719;368720 291146;291147 291147 0 RLLEGDGGPNTGGMGAYCPAPQVSNDLLLK Oxidation (M) 3115.5067 0.50666844 1134 P22102 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes yes 0 1 1 By MS/MS 10 0 1 1 79.594 79.824 3 1.6615E-53 91838 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.123 90.461 26849000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26849000 44056 1134 39484 368721 291148 291148 1625 1 RLLEGEDAHLSSQQASGQSYSSR Unmodified 2505.1844 0.18440633 70 CON__P08779;P08779 KRT16 Keratin, type I cytoskeletal 16 yes no 0 0 1 By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 41.439 41.611 4 1.1254E-05 46523 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 44.683 37.061 + 137070000 0 0 0 12485000 0 0 2730800 11103000 3214600 9683300 0 5949000 83738000 8167000 0 44057 70 39485 368722;368723;368724;368725;368726;368727;368728;368729 291149;291150;291151;291152 291150 4 RLLEGEDAHLSSSQFSSGSQSSR Unmodified 2464.1579 0.15785722 56;97 CON__P02533;P02533;CON__Q61782 KRT14 Keratin, type I cytoskeletal 14 no no 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 2 1 1 2 1 49.331 49.523 3;4 7.5482E-68 56195 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 99.11 85.246 + 255230000 0 0 0 10831000 0 40450000 0 73930000 0 15771000 18056000 0 74802000 0 21390000 44058 56;97 39486 368730;368731;368732;368733;368734;368735;368736;368737;368738 291153;291154;291155;291156;291157;291158;291159;291160;291161;291162;291163;291164 291158 11 RLLEGEDAHLTQYK Unmodified 1671.858 0.8580338 84 CON__Q04695;Q04695 KRT17 Keratin, type I cytoskeletal 17 no no 0 0 1 By MS/MS 10 0 1 1 45.169 45.509 3 0.00014327 51227 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 70.281 49.818 + 27524000 0 0 0 0 0 0 0 0 0 0 0 0 27524000 0 0 44059 84 39487 368739 291165;291166;291167 291166 3 RLLELFPVNR Unmodified 1255.7401 0.74009091 5280 Q9Y6E2 BZW2 Basic leucine zipper and W2 domain-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 78.295 78.434 3 0.0011299 89931 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.228 42.352 28208000 0 0 0 0 0 6423600 0 0 3702100 0 1191400 0 1738100 1905400 13247000 44060 5280 39488 368740;368741;368742;368743;368744;368745 291168;291169 291169 2 RLLEPGAAEPAER Unmodified 1407.747 0.74702678 2857 Q68DC2 ANKS6 Ankyrin repeat and SAM domain-containing protein 6 yes yes 0 0 1 By MS/MS By matching 10 0 2 1 1 36.315 36.637 3 0.012102 40548 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 32.702 24.946 7032900 0 0 0 0 0 0 0 0 0 0 0 0 4380900 2652000 0 44061 2857 39489 368746;368747 291170 291170 1 RLLGADSATVFNIQEPEEETANQEYK Unmodified 2951.4149 0.41485977 3581 Q8WX93 PALLD Palladin yes yes 0 0 1 By MS/MS 10 0 1 1 79.128 79.374 3 8.9871E-24 91300 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.711 70.728 18904000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18904000 44062 3581 39490 368748 291171 291171 1 RLLIDGDGAGDDRR Unmodified 1527.7754 0.7753668 2881 Q6I9Y2 THOC7 THO complex subunit 7 homolog yes yes 0 0 2 By matching By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 32.512 32.795 3 0.016174 35790 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 53.491 39.461 36796000 0 0 0 0 0 0 0 4796300 5600600 0 6138900 0 13071000 7189200 0 44063 2881 39491 368749;368750;368751;368752;368753 291172 291172 1 RLLLDTLQLSK Unmodified 1298.7922 0.79218606 276 O15357 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 yes yes 0 0 1 By MS/MS By matching By matching By MS/MS 10 0 4 1 1 1 1 76.932 77.093 3 0.00045299 88393 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.958 50.38 15922000 0 0 0 0 0 2660600 0 2599900 2417400 0 0 0 0 0 8244500 44064 276 39492 368754;368755;368756;368757 291173;291174 291174 2 RLLQLQEQMR Oxidation (M) 1329.7187 0.71870354 1029 P15924 DSP Desmoplakin yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 38.091 38.458 3 0.0047014 42616 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 47.894 37.705 178460000 0 0 0 0 0 0 0 49574000 16305000 20844000 0 26863000 37121000 13533000 14217000 44065 1029 39493 368758;368759;368760;368761;368762;368763;368764 291175;291176;291177;291178 291177 1435 3 RLLQLQEQMR Unmodified 1313.7238 0.72378892 1029 P15924 DSP Desmoplakin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 51.2 50.966 3 0.00013975 57559 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 114.97 108.94 46465000 0 0 0 23735000 0 0 0 22731000 0 0 0 0 0 0 0 44066 1029 39493 368765;368766;368767;368768 291179;291180;291181;291182;291183 291180 5 RLLSDSLPPSTGTFQEAQSR Unmodified 2189.1077 0.10765955 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 1 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 16 1 1 1 2 2 2 3 1 1 1 1 68.752 68.825 3 1.9036E-15 78703 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 88.176 77.195 122340000 0 0 0 3970100 2163900 11511000 6647900 13474000 7743800 40646000 6305000 13177000 6966500 9730300 0 44067 5187 39494 368769;368770;368771;368772;368773;368774;368775;368776;368777;368778;368779;368780;368781;368782;368783;368784 291184;291185;291186;291187;291188;291189;291190;291191;291192;291193;291194 291186 9 RLLSNEEEK Unmodified 1116.5775 0.57750184 234 O14976 GAK Cyclin-G-associated kinase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.301 13.456 2 0.0029376 12802 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 147.4 44.891 179650000 0 0 0 12268000 10660000 12455000 13924000 13406000 12433000 12752000 15127000 15585000 23439000 16084000 21513000 44068 234 39495 368785;368786;368787;368788;368789;368790;368791;368792;368793;368794;368795;368796 291195;291196;291197;291198;291199 291196 4 RLLSTDAEAVSTR Unmodified 1417.7525 0.75250609 2547 Q15545 TAF7 Transcription initiation factor TFIID subunit 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 38.575 38.769 3 0.0073139 43832 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 37.013 29.288 48730000 0 0 0 2976700 4009700 0 3567900 2331500 2814100 4044500 6143700 6055700 4067500 4298000 8420500 44069 2547 39496 368797;368798;368799;368800;368801;368802;368803;368804;368805;368806;368807 291200;291201;291202;291203;291204;291205;291206;291207;291208;291209 291208 10 RLLTVSSHNLESK Unmodified 1482.8154 0.8154407 2897 Q6NUJ1 PSAPL1 Proactivator polypeptide-like 1;Saposin A-like;Saposin B-Val-like;Saposin B-like;Saposin C-like;Saposin D-like yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 36.082 36.09 3 0.0025809 40378 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 44.807 44.807 58987000 0 0 0 36292000 1798700 0 3587000 5325700 2837700 0 0 0 5256400 3889600 0 44070 2897 39497 368808;368809;368810;368811;368812;368813;368814 291210;291211 291211 2 RLMADELER Oxidation (M) 1147.5656 0.56555694 417 O60610 DIAPH1 Protein diaphanous homolog 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 26.51 26.727 3 0.013625 28469 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 40.727 27.374 83871000 0 0 0 8686800 5539400 0 8222500 7441000 7744100 9297300 7013100 8485200 9266900 7138400 5036400 44071 417 39498 368815;368816;368817;368818;368819;368820;368821;368822;368823;368824;368825 291212;291213;291214;291215 291212 524 1 RLMAEDEEGYRK Oxidation (M) 1511.7038 0.70384134 1656;1655 P51532;P51531 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 no no 0 1 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 14.607 14.746 3 0.0025863 14057 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 68.676 56.407 81689000 0 0 0 5975800 3800500 7788800 3991900 5122600 7844000 10433000 8825300 0 10107000 6765800 11033000 44072 1656;1655 39499 368826;368827;368828;368829;368830;368831;368832;368833;368834;368835;368836 291216;291217;291218;291219;291220;291221;291222;291223 291217 2665 8 RLMAEDEEGYRK Unmodified 1495.7089 0.70892672 1656;1655 P51532;P51531 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 no no 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 21.319 21.683 3 0.01216 22203 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 52.495 45.614 53390000 0 0 0 0 0 0 0 9566200 0 7176800 14329000 7226700 15091000 0 0 44073 1656;1655 39499 368837;368838;368839;368840;368841;368842 291224;291225;291226 291225 3 RLMTEILGR Unmodified 1087.6172 0.61719858 369 O43809 NUDT21 Cleavage and polyadenylation specificity factor subunit 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 57.41 57.695 2 0.032417 65955 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 88.37 50.209 138630000 0 0 0 0 0 23809000 2981600 0 18542000 0 0 15532000 20322000 0 57448000 44074 369 39500 368843;368844;368845;368846;368847;368848 291227;291228 291228 2 RLMTEILGR Oxidation (M) 1103.6121 0.61211321 369 O43809 NUDT21 Cleavage and polyadenylation specificity factor subunit 5 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.907 41.085 2 0.040937 46563 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 82.75 52.675 603510000 0 0 0 34867000 27433000 41207000 52320000 33441000 33869000 53519000 59713000 77383000 56276000 50536000 82946000 44075 369 39500 368849;368850;368851;368852;368853;368854;368855;368856;368857;368858;368859;368860 291229 291229 0 RLMTPWEESNVMQDK Unmodified 1862.8655 0.86550371 4538 Q9NP74 PALMD Palmdelphin yes yes 0 0 1 By MS/MS 2 0 1 1 79.221 71.091 3 0.00026915 93408 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.467 54.982 13027000 13027000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44076 4538 39501 368861 291230 291230 1 RLNHSPPQSSSR Unmodified 1364.6909 0.69090889 2786 Q5T8P6 RBM26 RNA-binding protein 26 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.2146 6.3352 3 0.0244 4125 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 29.071 23.229 18452000 0 0 0 1256900 1551800 945100 1600800 1542100 1424500 1389200 2071800 2649500 1598300 1090400 1331800 44077 2786 39502 368862;368863;368864;368865;368866;368867;368868;368869;368870;368871;368872;368873 291231 291231 1 RLNHYVLYK Unmodified 1204.6717 0.671677 308 O43242 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 0 0 1 By MS/MS By MS/MS By matching By matching 10 0 4 1 1 1 1 34.5 34.808 3 0.0030424 38248 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.692 40.574 51774000 0 0 0 0 0 35455000 0 3777100 0 0 0 10097000 2444500 0 0 44078 308 39503 368874;368875;368876;368877 291232 291232 1 RLNLATECLPLDK Unmodified 1541.8236 0.82356254 3042 Q7L0Y3 TRMT10C Mitochondrial ribonuclease P protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 78.709 70.578 3 0.0037719 92783 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.897 35.352 8850800 8850800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44079 3042 39504 368878 291233 291233 0 RLNPDGK Unmodified 798.4348 0.43480077 1191 P25685 DNAJB1 DnaJ homolog subfamily B member 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 3 1 1 5.0995 1.9257 2 0.025839 5608 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 130.04 66.892 1333600000 1267200000 23200000 43172000 0 0 0 0 0 0 0 0 0 0 0 0 44080 1191 39505 368879;368880;368881;368882;368883 291234;291235;291236 291235 1 RLNPEALQAEQLNK Unmodified 1622.874 0.87401821 4900 Q9UHF7 TRPS1 Zinc finger transcription factor Trps1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 51.712 50.446 3 0.00037446 70332 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.196 67.945 112420000 66324000 0 0 2816100 0 0 0 8131800 0 6155400 0 0 0 8039500 20951000 44081 4900 39506 368884;368885;368886;368887;368888;368889 291237;291238;291239;291240 291238 3 RLNQQPSQGLGPR Unmodified 1449.7801 0.78005825 1382 P36915 GNL1 Guanine nucleotide-binding protein-like 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.068 24.273 3 0.00019385 25970 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 76.326 68.715 130940000 0 0 0 7367000 8393900 14053000 9562300 9373200 13964000 11412000 9723800 12512000 11469000 7562300 15546000 44082 1382 39507 368890;368891;368892;368893;368894;368895;368896;368897;368898;368899;368900;368901 291241;291242;291243;291244;291245;291246;291247;291248;291249;291250;291251;291252;291253;291254 291243 12 RLNQSAENGSSLPSAASSCAEAR Unmodified 2362.0931 0.093148477 3388 Q8NB90 SPATA5 Spermatogenesis-associated protein 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 38.328 38.733 3 2.4442E-07 42850 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 52.909 48.881 15957000 0 0 0 0 0 0 4013300 0 0 0 3863800 4792500 3287400 0 0 44083 3388 39508 368902;368903;368904;368905;368906 291255;291256;291257;291258 291256 4 RLNQVIFPVSYNDK Unmodified 1691.8995 0.89950468 4310 Q9GZZ1 NAA50 N-alpha-acetyltransferase 50 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.06 2.58 4 30 2 1 1 3 3 2 3 3 3 3 3 3 2 2 73.157 72.977 2;3 2.8388E-99 83601 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 246.08 209.5 14293000000 23907000 512530 438730 491860000 1042100000 2005400000 772020000 1133600000 1568900000 1803500000 2001400000 3385100000 21007000 0 43574000 44084 4310 39509 368907;368908;368909;368910;368911;368912;368913;368914;368915;368916;368917;368918;368919;368920;368921;368922;368923;368924;368925;368926;368927;368928;368929;368930;368931;368932;368933;368934;368935;368936;368937;368938;368939;368940 291259;291260;291261;291262;291263;291264;291265;291266;291267;291268;291269;291270;291271;291272;291273;291274;291275;291276;291277;291278;291279;291280;291281;291282;291283;291284;291285;291286;291287;291288;291289;291290;291291;291292;291293;291294;291295;291296;291297;291298;291299;291300;291301;291302;291303;291304;291305 291283 45 RLPDAHSDYAR Unmodified 1299.632 0.63199703 3948 Q96PK6 RBM14 RNA-binding protein 14 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 19.972 20.075 3 0.0017297 20509 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 105.4 105.4 151760000 0 0 0 0 9455300 17786000 16984000 17576000 16306000 24889000 0 0 28475000 20286000 0 44085 3948 39510 368941;368942;368943;368944;368945;368946;368947;368948 291306;291307;291308;291309;291310;291311;291312;291313 291312 0 RLPDGIGQLK Unmodified 1095.64 0.64004252 2381 Q14160 SCRIB Protein scribble homolog yes yes 0 0 1 By MS/MS By matching 10 0 2 1 1 49.834 50.272 2 0.016468 57008 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 98.048 55.45 35470000 0 0 0 0 0 0 0 9013400 0 0 0 0 0 0 26457000 44086 2381 39511 368949;368950 291314 291314 1 RLPLNFLSGEK Unmodified 1272.719 0.71902112 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 2 2 2 2 2 2 1 75.04 75.213 2;3 0.0013113 86506 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 110.54 70.482 486710000 0 0 0 0 0 3505400 16857000 33825000 46821000 72348000 86352000 221500000 0 0 5494000 44087 4226 39512 368951;368952;368953;368954;368955;368956;368957;368958;368959;368960;368961;368962;368963;368964 291315;291316;291317;291318;291319;291320;291321;291322;291323 291322 3 RLPLPVQNAPSETSEEEPK Unmodified 2120.075 0.074962442 2147 Q08050 FOXM1 Forkhead box protein M1 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 60.31 60.363 3 0.017959 68775 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 23.434 20.045 28943000 0 0 0 4556600 0 0 4323200 3999100 0 5005200 6620100 0 4438400 0 0 44088 2147 39513 368965;368966;368967;368968;368969;368970 291324 291324 1 RLPLTLVPGER Unmodified 1249.7507 0.7506556 2895 Q6N069 NAA16 N-alpha-acetyltransferase 16, NatA auxiliary subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 2 2 69.882 69.955 2;3 0.0013882 80092 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 50.354 46.013 198830000 0 0 0 3456000 5796300 10346000 9832700 16930000 12850000 17726000 46718000 75175000 0 0 0 44089 2895 39514 368971;368972;368973;368974;368975;368976;368977;368978;368979;368980;368981 291325;291326;291327;291328;291329;291330;291331;291332;291333;291334 291326 9 RLPNLPSQSR Unmodified 1166.652 0.65200419 2456 Q14966 ZNF638 Zinc finger protein 638 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 36.292 36.492 3 0.012191 40937 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 40.715 23.773 58827000 0 0 0 4339600 4361100 0 5390700 0 4550900 5404300 4056400 8319900 6950900 7052600 8400400 44090 2456 39515 368982;368983;368984;368985;368986;368987;368988;368989;368990;368991 291335;291336;291337;291338;291339;291340 291339 6 RLPPPFVPTLSGR Unmodified 1435.83 0.82996855 2603 Q16512 PKN1 Serine/threonine-protein kinase N1 yes yes 0 0 1 By MS/MS By matching By matching 10 0 3 1 1 1 76.21 76.337 3 0.027044 88138 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 26.124 18.669 9774300 0 0 0 0 0 3651100 0 0 0 1493500 0 0 0 0 4629700 44091 2603 39516 368992;368993;368994 291341 291341 1 RLPPQQIEK Unmodified 1107.64 0.64004252 1525 P47756 CAPZB F-actin-capping protein subunit beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 2 1 1 1 1 1 1 23.271 22.932 2 0.00153 33784 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 149.57 99.446 148520000 41143000 0 0 6813000 5760800 9026000 14164000 0 7647400 10271000 12617000 17067000 12321000 11696000 0 44092 1525 39517 368995;368996;368997;368998;368999;369000;369001;369002;369003;369004;369005;369006 291342;291343;291344;291345;291346;291347;291348;291349;291350;291351;291352;291353;291354;291355;291356;291357;291358;291359;291360 291351 19 RLPVPESITGFAR Unmodified 1441.8041 0.80414773 3349 Q8N5K1 CISD2 CDGSH iron-sulfur domain-containing protein 2 yes yes 0 0 1 By matching By matching By matching By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 76.093 76.243 3 3.7901E-05 87535 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.716 48.656 26789000 0 0 0 0 0 3267700 0 5426000 0 2790800 0 3462800 0 2344900 9497200 44093 3349 39518 369007;369008;369009;369010;369011;369012 291361 291361 1 RLQAAGNAVK Unmodified 1026.5934 0.59342667 5187;5201 Q9Y490;Q9Y4G6 TLN1;TLN2 Talin-1;Talin-2 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 10.407 10.205 2 3.9593E-05 16197 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 135.83 67.85 574390000 396120000 0 0 12790000 9035900 0 17146000 10054000 9865300 20723000 29267000 24286000 20704000 21311000 3093000 44094 5187;5201 39519 369013;369014;369015;369016;369017;369018;369019;369020;369021;369022;369023;369024 291362;291363;291364;291365;291366 291363 2 RLQAEAEEQK Unmodified 1200.6099 0.6098646 3573 Q8WWI1 LMO7 LIM domain only protein 7 yes yes 0 0 1 By matching By MS/MS 2 0 2 1 1 11.223 8.4573 3 0.003162 10888 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 121.6 85.018 22410000 0 5105500 17305000 0 0 0 0 0 0 0 0 0 0 0 0 44095 3573 39520 369025;369026 291367 291367 0 RLQDEDASSTQQRR Unmodified 1688.819 0.81902253 2482 Q15032 R3HDM1 R3H domain-containing protein 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 7.0825 7.2123 3 0.01351 4689 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.648 42.931 55617000 0 0 0 0 2412500 3439000 3843400 4408100 6848900 6076800 0 8269400 7290800 3814200 9213900 44096 2482 39521 369027;369028;369029;369030;369031;369032;369033;369034;369035;369036 291368;291369 291368 2 RLQDLATQLQEK Unmodified 1441.7889 0.7888916 463 O75150 RNF40 E3 ubiquitin-protein ligase BRE1B yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 56.572 56.561 2;3 1.7939E-06 63286 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 112.15 27.977 66670000 0 0 0 6323200 5711500 14910000 9287700 0 8065900 12144000 4567600 0 5659700 0 0 44097 463 39522 369037;369038;369039;369040;369041;369042;369043;369044;369045 291370;291371;291372;291373 291371 2 RLQDLENQYRK Unmodified 1461.7688 0.76882486 378 O43896 KIF1C Kinesin-like protein KIF1C yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.577 33.808 3 0.00066047 37135 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 92.866 75.924 161410000 0 0 0 0 10167000 17557000 11098000 11920000 11841000 14429000 18682000 30205000 16211000 0 19302000 44098 378 39523 369046;369047;369048;369049;369050;369051;369052;369053;369054;369055;369056;369057 291374;291375;291376;291377;291378;291379;291380;291381;291382;291383;291384 291374 11 RLQDVSGQLNSTK Unmodified 1444.7634 0.76340513 1189 P25440 BRD2 Bromodomain-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.8 2.86 3 17 2 1 1 1 1 2 1 1 2 2 1 1 2 2 31.702 31.041 2;3 8.4525E-05 33819 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 70.272 64.367 209740000 40290000 0 1566600 10283000 9680900 12153000 17388000 0 8902500 20069000 19390000 19176000 9904200 14151000 26789000 44099 1189 39524 369058;369059;369060;369061;369062;369063;369064;369065;369066;369067;369068;369069;369070;369071;369072;369073;369074;369075;369076;369077 291385;291386;291387;291388;291389;291390;291391;291392;291393;291394;291395;291396;291397;291398;291399;291400;291401;291402 291391 17 RLQDVSGQLSSSK Unmodified 1403.7369 0.73685603 2493 Q15059 BRD3 Bromodomain-containing protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 32.841 30.557 2;3 0.017034 42984 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.676 43.9 28561000 10372000 0 0 0 9082800 9106100 0 0 0 0 0 0 0 0 0 44100 2493 39525 369078;369079;369080 291403;291404 291403 1 RLQEAQLYK Unmodified 1147.635 0.63495714 3350 Q8N5M4 TTC9C Tetratricopeptide repeat protein 9C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 29.335 29.015 2;3 0.012283 43337 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.614 58.022 209880000 35902000 0 0 11099000 8281900 8401000 8727100 7756400 7224900 16439000 25703000 21503000 11219000 14263000 33362000 44101 3350 39526 369081;369082;369083;369084;369085;369086;369087;369088;369089;369090;369091;369092;369093 291405;291406;291407 291406 1 RLQEDPNYSPQR Unmodified 1501.7274 0.72735397 1502 P46379 BAG6 Large proline-rich protein BAG6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.669 24.873 3 0.0023463 26475 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 50.314 28.441 68208000 0 0 0 3456600 4353400 5166700 5008100 5663800 4728700 4641300 4699900 8180800 9826100 5424300 7058200 44102 1502 39527 369094;369095;369096;369097;369098;369099;369100;369101;369102;369103;369104;369105 291408;291409;291410;291411;291412;291413;291414;291415;291416;291417 291410 9 RLQEDPNYSPQRFPNAQR Unmodified 2215.0883 0.088261516 1502 P46379 BAG6 Large proline-rich protein BAG6 yes yes 0 0 2 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 1 2 2 2 2 2 2 2 2 2 2 42.895 43.133 3;4 1.2084E-52 47453 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 161.19 139.99 851900000 0 0 0 11489000 8402100 101960000 40977000 82243000 63575000 51402000 57887000 139260000 93260000 76816000 124630000 44103 1502 39528 369106;369107;369108;369109;369110;369111;369112;369113;369114;369115;369116;369117;369118;369119;369120;369121;369122;369123;369124;369125;369126;369127 291418;291419;291420;291421;291422;291423;291424;291425;291426;291427;291428;291429;291430;291431;291432;291433 291431 15 RLQEEDQQFR Unmodified 1347.6531 0.6531264 2270 Q13322 GRB10 Growth factor receptor-bound protein 10 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.528 22.706 3 0.0013456 23084 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.781 60.102 55238000 0 0 0 3048600 2239900 3367200 4765100 2505400 2585500 3875000 0 12442000 3952300 5034500 11422000 44104 2270 39529 369128;369129;369130;369131;369132;369133;369134;369135;369136;369137;369138;369139 291434;291435;291436;291437;291438;291439;291440;291441;291442;291443 291442 8 RLQEETGAK Unmodified 1030.5407 0.5407224 2138 Q07666;Q5VWX1 KHDRBS1;KHDRBS2 KH domain-containing, RNA-binding, signal transduction-associated protein 1;KH domain-containing, RNA-binding, signal transduction-associated protein 2 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 6.2211 5.3876 2 0.0055076 5858 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 135.43 26.621 3064400000 639330000 574190000 1749400000 10554000 8312800 10316000 13994000 11713000 11083000 4363000 5122700 7162300 4393800 5157800 9310400 44105 2138 39530 369140;369141;369142;369143;369144;369145;369146;369147;369148;369149;369150;369151;369152;369153;369154;369155;369156 291444;291445;291446;291447;291448;291449;291450;291451;291452;291453;291454 291452 9 RLQEETSQRQK Unmodified 1401.7324 0.73243935 3127 Q86SQ0 PHLDB2 Pleckstrin homology-like domain family B member 2 yes yes 0 0 2 By MS/MS 2 0 1 1 6.6978 3.2656 3 1.1837E-08 6326 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 134.13 102.29 14474000 14474000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44106 3127 39531 369157 291455 291455 1 RLQELDAASK Unmodified 1129.6091 0.60913632 886 P09497 CLTB Clathrin light chain B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23.326 22.627 2 8.4291E-11 33240 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 161.17 93.277 979140000 526190000 105880000 101980000 9389600 7705200 10401000 11433000 9805100 12300000 20217000 25528000 43485000 29046000 22943000 42834000 44107 886 39532 369158;369159;369160;369161;369162;369163;369164;369165;369166;369167;369168;369169;369170;369171;369172 291456;291457;291458;291459;291460;291461;291462;291463;291464;291465;291466;291467;291468 291461 12 RLQEQNAIDMEIIVNAK Unmodified 1984.0412 0.041159893 2638 Q16851 UGP2 UTP--glucose-1-phosphate uridylyltransferase yes yes 0 0 1 By MS/MS 3 0 1 1 82.084 78.391 3 0.0034646 79141 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 44.567 35.284 1394100 1394100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44108 2638 39533 369173 291469 291469 1 RLQGLSASDVTEQIIK Unmodified 1756.9683 0.96831253 4832 Q9UBB5 MBD2 Methyl-CpG-binding domain protein 2 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 75.259 74.692 3 1.2714E-11 95820 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 112.34 88.147 164720000 61812000 0 0 1445500 2484100 10192000 5012700 7144300 10155000 10328000 8129300 11344000 6539600 6947800 23183000 44109 4832 39534 369174;369175;369176;369177;369178;369179;369180;369181;369182;369183;369184;369185;369186 291470;291471;291472;291473;291474;291475;291476;291477;291478;291479;291480;291481;291482 291475 13 RLQGQLEQGDDTAAERLEK Unmodified 2156.0822 0.082173085 3421 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 yes yes 0 0 2 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 1 2 2 2 2 2 2 2 41.554 41.886 3;4 1.1911E-12 46134 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 81.016 66.246 211220000 0 0 0 4644800 0 11455000 0 17513000 0 23156000 25202000 36262000 31397000 21843000 39742000 44110 3421 39535 369187;369188;369189;369190;369191;369192;369193;369194;369195;369196;369197;369198;369199;369200;369201;369202 291483;291484;291485;291486;291487;291488;291489;291490;291491;291492 291491 5 RLQGSGVTVNALHPGVAR Unmodified 1831.0177 0.017662755 3398 Q8NBN7 RDH13 Retinol dehydrogenase 13 yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 47.721 48.056 3 6.1158E-06 53020 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.831 48.609 55872000 0 0 0 0 0 9146600 4637900 0 5304800 6298100 5982600 8965900 7722400 0 7813900 44111 3398 39536 369203;369204;369205;369206;369207;369208;369209;369210 291493;291494;291495;291496;291497 291494 5 RLQIEESSK Unmodified 1088.5826 0.58258722 992 P13984 GTF2F2 General transcription factor IIF subunit 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 18.565 17.773 2 0.0004566 27120 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 152.34 74.609 569920000 376050000 7083600 49643000 11526000 8253700 10191000 10149000 0 9243700 14212000 0 17963000 18448000 12942000 24219000 44112 992 39537 369211;369212;369213;369214;369215;369216;369217;369218;369219;369220;369221;369222;369223 291498;291499;291500;291501;291502;291503;291504;291505;291506;291507 291502 2 RLQIEESSKPVR Unmodified 1440.8049 0.80487601 992 P13984 GTF2F2 General transcription factor IIF subunit 2 yes yes 0 0 2 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 26.203 26.343 3 0.0057022 28359 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 73.466 52.116 50522000 0 0 0 3695400 3053200 1802400 6487000 4794100 1465700 4286600 5445900 14408000 5083600 0 0 44113 992 39538 369224;369225;369226;369227;369228;369229;369230;369231;369232;369233 291508;291509 291508 1 RLQPDPEPTEEDIEK Unmodified 1794.8636 0.86357268 1436 P41229;Q9BY66 KDM5C;KDM5D Lysine-specific demethylase 5C;Lysine-specific demethylase 5D yes no 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 44.161 42.555 3 0.0020182 48000 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 32.302 15.903 55608000 13998000 0 4449300 0 3320100 9197200 0 0 0 8179400 9626000 0 0 6838600 0 44114 1436 39539 369234;369235;369236;369237;369238;369239;369240 291510;291511;291512;291513;291514;291515 291510 5 RLQQQQQQQQLAQMK Oxidation (M) 1898.9745 0.97447731 2994 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes yes 0 1 1 By MS/MS By MS/MS 10 0 2 1 1 16.436 16.821 3 0.0011243 16449 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 43.184 25.439 6415500 0 0 0 0 0 0 0 0 0 0 0 3698700 2716800 0 0 44115 2994 39540 369241;369242 291516;291517;291518 291518 4609 3 RLQQQQQQQQLAQMK Unmodified 1882.9796 0.97956269 2994 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 28.623 29.144 3 3.4817E-27 31060 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 100.73 77.308 29690000 0 0 0 0 0 0 0 0 0 0 0 17668000 12021000 0 0 44116 2994 39540 369243;369244;369245 291519;291520;291521 291520 3 RLQQQQRPEDAEDGAEGGGK Unmodified 2168.0206 0.020635461 2168 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 1 2 2 2 2 2 2 2 13.324 13.479 3;4 6.6018E-52 12152 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 118.53 109.11 259470000 0 0 0 16141000 13261000 27443000 15373000 5496700 11933000 21792000 20568000 34719000 30175000 20904000 41665000 44117 2168 39541 369246;369247;369248;369249;369250;369251;369252;369253;369254;369255;369256;369257;369258;369259;369260;369261;369262;369263;369264;369265;369266;369267;369268 291522;291523;291524;291525;291526;291527;291528;291529;291530;291531;291532;291533;291534;291535;291536;291537;291538 291527 16 RLQSIGTENTEENR Unmodified 1645.802 0.80197548 771 P04075 ALDOA Fructose-bisphosphate aldolase A yes yes 0 0 1 By MS/MS 10 0 1 1 22.279 22.609 3 6.8625E-06 22691 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 72.523 48.567 47405000 0 0 0 0 0 0 0 0 0 0 0 0 0 47405000 0 44118 771 39542 369269 291539 291539 1 RLQSIGTENTEENRR Unmodified 1801.9031 0.90308651 771 P04075 ALDOA Fructose-bisphosphate aldolase A yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 2 2 2 1 1 1 1 2 2 18.88 19.024 3;4 4.1081E-10 17846 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 97.904 97.904 1220400000 0 0 0 84026000 71856000 104430000 106320000 79044000 69513000 0 71225000 0 76473000 288750000 268740000 44119 771 39543 369270;369271;369272;369273;369274;369275;369276;369277;369278;369279;369280;369281;369282;369283;369284 291540;291541;291542;291543;291544;291545;291546;291547;291548;291549;291550;291551;291552 291547 7 RLQTQVFK Unmodified 1018.5924 0.59236404 1511 P46781 RPS9 40S ribosomal protein S9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 2 1 1 29.196 29.399 2 0.011703 31986 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 136.11 88.265 1346600000 0 0 0 71123000 46636000 77700000 57344000 93841000 73174000 121300000 134540000 156240000 223150000 113060000 178480000 44120 1511 39544 369285;369286;369287;369288;369289;369290;369291;369292;369293;369294;369295;369296;369297 291553;291554;291555 291553 0 RLQTSSVLVSGLR Unmodified 1414.8256 0.82561145 1137 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 59.301 59.563 3 0.018652 67950 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 29.981 21.804 113270000 0 0 0 0 0 8171900 6032000 7983400 0 9558700 10145000 14482000 6605400 9768300 40523000 44121 1137 39545 369298;369299;369300;369301;369302;369303;369304;369305;369306 291556;291557;291558;291559;291560;291561 291556 6 RLQVEQAPHSSPGAK Unmodified 1603.8431 0.84305243 3332 Q8N4P3 HDDC3 Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 2 1 1 1 1 1 1 1 1 1 1 21.354 20.603 3;4 2.597E-05 20399 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 74.296 55.839 286850000 220040000 0 0 2575900 3347300 3627800 7075700 11407000 12089000 5143100 6811400 9637900 0 0 5095200 44122 3332 39546 369307;369308;369309;369310;369311;369312;369313;369314;369315;369316;369317;369318 291562;291563;291564;291565;291566;291567;291568;291569;291570;291571;291572 291569 11 RLRPLVSTQPAK Unmodified 1364.8252 0.82521752 3698 Q92994 BRF1 Transcription factor IIIB 90 kDa subunit yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 29.552 29.547 3 0.042096 31653 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 53.569 43.517 55547000 0 0 0 3341100 2068500 15689000 5297800 4475200 7886700 0 0 0 16789000 0 0 44123 3698 39547 369319;369320;369321;369322;369323;369324;369325 291573 291573 1 RLSDEHEPEQR Unmodified 1394.6539 0.65385468 4954 Q9UK59 DBR1 Lariat debranching enzyme yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 7.7402 7.8763 3 0.00070186 6380 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 58.674 50.075 110300000 0 0 0 7556500 6426500 0 7170100 0 0 10639000 21233000 23360000 9411300 8143600 16359000 44124 4954 39548 369326;369327;369328;369329;369330;369331;369332;369333;369334;369335 291574;291575;291576;291577;291578;291579;291580;291581;291582;291583;291584 291581 11 RLSDEHEPEQRK Unmodified 1522.7488 0.7488177 4954 Q9UK59 DBR1 Lariat debranching enzyme yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.64 1.67 1 21 1 1 2 2 2 2 1 2 2 1 2 2 2 6.4253 6.386 3;4 7.0855E-05 4627 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 81.377 71.865 233570000 10407000 0 0 4235400 13660000 17535000 25284000 10898000 5731000 15975000 28130000 26113000 26446000 23130000 26023000 44125 4954 39549 369336;369337;369338;369339;369340;369341;369342;369343;369344;369345;369346;369347;369348;369349;369350;369351;369352;369353;369354;369355;369356;369357 291585;291586;291587;291588;291589;291590;291591;291592;291593;291594;291595 291590 10 RLSDYSIGPNSK Unmodified 1335.6783 0.67827852 948 P11441 UBL4A Ubiquitin-like protein 4A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 2 20 2 2 2 1 1 1 1 2 2 2 2 2 2 37.271 36.828 2;3 0.00011639 39939 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 107.03 76.457 270980000 39154000 0 0 11427000 12735000 8941400 6219100 14618000 9912700 20800000 23028000 35355000 27043000 24037000 37714000 44126 948 39550 369358;369359;369360;369361;369362;369363;369364;369365;369366;369367;369368;369369;369370;369371;369372;369373;369374;369375;369376;369377;369378;369379 291596;291597;291598;291599;291600;291601;291602;291603;291604;291605;291606;291607;291608;291609;291610 291608 12 RLSEDYGVLK Unmodified 1178.6295 0.62953741 1317 P32119 PRDX2 Peroxiredoxin-2 yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 2 1 2 2 42.038 42.353 2;3 0.0024421 47346 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 49.466 32.552 520920000 0 0 0 25293000 0 11156000 758270 19428000 0 15100000 0 119130000 9809300 83701000 236550000 44127 1317 39551 369380;369381;369382;369383;369384;369385;369386;369387;369388;369389;369390;369391 291611;291612;291613;291614;291615;291616;291617 291614 4 RLSESLHVVDENK Unmodified 1524.7896 0.78961988 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 35.465 35.956 3 0.0023964 40138 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 33.616 22.162 26773000 0 0 0 0 0 5774400 0 0 0 0 0 9728000 0 0 11271000 44128 3443 39552 369392;369393;369394 291618;291619;291620;291621 291618 4 RLSHDNMEEK Unmodified 1257.5772 0.57718426 3955 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes yes 0 0 1 By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.5745 6.6982 3 0.00049682 4587 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 88.338 60.161 161790000 0 0 0 8025500 7690500 10994000 13350000 17057000 17781000 11098000 12725000 16710000 17434000 14139000 14790000 44129 3955 39553 369395;369396;369397;369398;369399;369400;369401;369402;369403;369404;369405;369406 291622;291623;291624;291625;291626;291627 291622 2 RLSQAEEETRR Unmodified 1373.7011 0.70113922 3925 Q96MH2 HEXIM2 Protein HEXIM2 yes yes 0 0 2 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.4111 7.539 3 0.0021558 5844 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 78.324 46.316 314880000 0 0 0 7094700 11171000 16476000 9040700 14068000 15015000 24548000 72203000 42353000 35235000 27648000 40031000 44130 3925 39554 369407;369408;369409;369410;369411;369412;369413;369414;369415;369416;369417;369418 291628;291629;291630;291631;291632;291633;291634;291635;291636;291637 291635 4 RLSQISAGETEYNTQDSK Unmodified 2025.9603 0.96032661 3009 Q6ZS30 NBEAL1 Neurobeachin-like protein 1 yes yes 0 0 1 By MS/MS 2 0 2 2 43.395 36.601 2;3 1.4182E-08 50371 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 91.207 62.231 36959000 36959000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44131 3009 39555 369419;369420 291638;291639;291640 291640 3 RLSQPESAEK Unmodified 1143.5884 0.58840088 4976 Q9UKV3 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 8.0017 8.1286 2 0.017601 5789 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 89.047 37.193 43361000 0 0 0 2931900 1603000 1796400 2172500 2190700 2426800 3132000 11432000 4814800 3975900 3682300 3202200 44132 4976 39556 369421;369422;369423;369424;369425;369426;369427;369428;369429;369430;369431;369432 291641;291642;291643;291644 291642 4 RLSQSDEDVIR Unmodified 1316.6684 0.66844211 4434 Q9H7D7 WDR26 WD repeat-containing protein 26 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 28.619 28.48 3 0.044457 30760 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 26.703 21.408 24193000 0 0 0 20878000 0 3315100 0 0 0 0 0 0 0 0 0 44133 4434 39557 369433;369434 291645 291645 1 RLSQVDPEMAAK Unmodified 1343.6867 0.68673471 4378 Q9H3H1 TRIT1 tRNA dimethylallyltransferase, mitochondrial yes yes 0 0 1 By MS/MS 2 0 1 1 42.857 36.09 2 0.04376 49818 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.132 38.659 17835000 17835000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44134 4378 39558 369435 291646 291646 1 RLSSEVEALRR Unmodified 1314.7368 0.73679645 1029 P15924 DSP Desmoplakin yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.917 35.097 3 0.00045299 38878 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 102.66 76.537 413780000 0 0 0 27945000 4185700 33605000 11434000 96146000 27183000 14223000 18696000 43702000 63123000 23547000 49991000 44135 1029 39559 369436;369437;369438;369439;369440;369441;369442;369443;369444;369445;369446;369447 291647;291648;291649;291650;291651;291652;291653 291650 7 RLSSGEDTTELRK Unmodified 1490.7689 0.76888444 4822 Q9P2N5 RBM27 RNA-binding protein 27 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.43 2.06 1 13 1 2 1 1 1 1 1 1 1 1 1 1 1 16.768 16.559 3 0.00082062 25863 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.031 61.705 323910000 84737000 0 0 11020000 9316300 15932000 8946300 13235000 10493000 19416000 18152000 52878000 21300000 20578000 37910000 44136 4822 39560 369448;369449;369450;369451;369452;369453;369454;369455;369456;369457;369458;369459;369460;369461 291654;291655;291656;291657;291658;291659;291660;291661;291662;291663 291658 3 RLSSPCIMVVNHDASSIPR Unmodified 2138.0725 0.072476797 2168 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 0 0 1 By MS/MS 10 0 1 1 64.135 64.699 4 0.020017 73324 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 25.871 16.707 6690700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6690700 44137 2168 39561 369462 291664 291664 0 RLSSSSATLLNSPDR Unmodified 1602.8325 0.83254733 2398 Q14244 MAP7 Ensconsin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.017 42.193 3 3.1867E-19 47916 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 82.529 50.091 223390000 0 0 0 14044000 17399000 14362000 18784000 17952000 12713000 19021000 26714000 24927000 17557000 14181000 25732000 44138 2398 39562 369463;369464;369465;369466;369467;369468;369469;369470;369471;369472;369473;369474 291665;291666;291667;291668;291669;291670;291671;291672;291673;291674;291675;291676 291675 10 RLSSVDSVLK Unmodified 1102.6346 0.63462279 5094 Q9Y2A7 NCKAP1 Nck-associated protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 43.107 42.583 2 0.011704 61767 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.331 26.507 186480000 78139000 0 0 5889300 4791700 12967000 6826300 8995100 4550800 11571000 10141000 13441000 0 8797100 20374000 44139 5094 39563 369475;369476;369477;369478;369479;369480;369481;369482;369483;369484;369485;369486 291677;291678;291679;291680 291679 3 RLSYNTASNK Unmodified 1152.5887 0.58873523 1562 P49207 RPL34 60S ribosomal protein L34 yes yes 0 0 1 By MS/MS 10 0 1 1 11.71 11.91 2 0.014561 10672 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 88.681 35.514 42776000 0 0 0 0 0 0 0 0 0 0 0 0 42776000 0 0 44140 1562 39564 369487 291681 291681 1 RLTDADAMK Unmodified 1019.507 0.50697943 1192 P25705 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 21.512 17.707 2 0.026515 25764 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.331 23.071 38509000 32949000 0 5560100 0 0 0 0 0 0 0 0 0 0 0 0 44141 1192 39565 369488;369489 291682 291682 1 RLTELETAVR Unmodified 1186.667 0.66698555 2317 Q13561 DCTN2 Dynactin subunit 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 42.575 42.656 3 0.0050128 47824 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 40.015 18.62 35190000 0 0 0 4362600 0 7738200 0 0 0 5912900 7994700 0 0 9181900 0 44142 2317 39566 369490;369491;369492;369493;369494 291683;291684;291685;291686;291687 291683 4 RLTLLAQQK Unmodified 1069.6608 0.66077796 403 O60488 ACSL4 Long-chain-fatty-acid--CoA ligase 4 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.093 38.272 2 0.039121 40855 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.368 19.611 236270000 0 0 0 11644000 13270000 17822000 18948000 18716000 18093000 21630000 19445000 26938000 20415000 19510000 29835000 44143 403 39567 369495;369496;369497;369498;369499;369500;369501;369502;369503;369504;369505;369506 291688 291688 0 RLTPTEVK Unmodified 942.54983 0.54983053 1194 P25787 PSMA2 Proteasome subunit alpha type-2 yes yes 0 0 1 By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 18.722 17.822 2 0.024325 27514 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 111.74 38.123 596770000 484180000 0 11836000 0 0 0 3158700 0 1431100 0 0 27144000 8651100 0 60368000 44144 1194 39568 369507;369508;369509;369510;369511;369512;369513 291689;291690 291690 0 RLTQNADCVVVLDNTALNR Unmodified 2171.1117 0.11169907 1152 P23258;Q9NRH3 TUBG1;TUBG2 Tubulin gamma-1 chain;Tubulin gamma-2 chain yes no 0 0 1 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 70.45 70.644 3 0.027886 81867 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 29.766 17.707 76454000 0 0 0 0 0 7743800 0 7026500 0 12818000 0 16610000 8749300 0 23507000 44145 1152 39569 369514;369515;369516;369517;369518;369519 291691;291692 291692 0 RLTVMSLQESGLK Unmodified 1460.8021 0.80209882 487 O75369 FLNB Filamin-B yes yes 0 0 1 By matching By matching By MS/MS 10 0 3 1 1 1 64.93 65.305 3 0.00020694 74045 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.363 40.568 14903000 0 0 0 0 0 0 0 0 0 1901400 0 3706400 0 0 9295700 44146 487 39570 369520;369521;369522 291693 291693 1 RLTVSSLQESGLK Unmodified 1416.7936 0.79364262 1124 P21333 FLNA Filamin-A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.68 1.57 1 24 1 2 2 2 2 2 2 2 2 2 2 2 2 52.447 52.257 2;3 1.2275E-32 57403 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 182.25 138.97 829510000 6233900 0 0 28318000 30898000 71229000 57792000 36628000 31702000 73630000 92530000 101920000 56561000 63662000 178400000 44147 1124 39571 369523;369524;369525;369526;369527;369528;369529;369530;369531;369532;369533;369534;369535;369536;369537;369538;369539;369540;369541;369542;369543;369544;369545;369546;369547 291694;291695;291696;291697;291698;291699;291700;291701;291702;291703;291704;291705;291706;291707;291708;291709 291698 13 RLVDTDVAR Unmodified 1043.5724 0.57235688 5068 Q9UQ84 EXO1 Exonuclease 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.307 26.506 2 0.026334 27529 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 92.838 48.489 169190000 0 0 0 12483000 11387000 13565000 12127000 13404000 10469000 13781000 18209000 23533000 17117000 10136000 12978000 44148 5068 39572 369548;369549;369550;369551;369552;369553;369554;369555;369556;369557;369558;369559 291710;291711;291712 291712 2 RLVEEELLK Unmodified 1127.655 0.65502388 4203 Q9BW71 HIRIP3 HIRA-interacting protein 3 yes yes 0 0 1 By MS/MS 2 0 1 1 63.958 55.679 2 0.016807 75038 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 123.86 58.608 48784000 48784000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44149 4203 39573 369560 291713 291713 0 RLVEEVTDDK Unmodified 1202.6143 0.61428128 3332 Q8N4P3 HDDC3 Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1 yes yes 0 0 1 By MS/MS By matching 10 0 2 1 1 25.309 25.99 2 0.023589 27344 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 79.148 21.29 7418200 0 0 0 0 0 0 0 0 0 0 0 5226000 0 0 2192200 44150 3332 39574 369561;369562 291714 291714 1 RLVHQNSASDDAEASMISK Unmodified 2057.98 0.9800162 2328 Q13616 CUL1 Cullin-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 6 4 2 2 2 1 1 37.622 34.616 3;4 6.5503E-96 35866 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 148.91 140.12 127840000 101760000 0 0 0 0 0 0 0 0 0 0 11476000 0 0 14598000 44151 2328 39575 369563;369564;369565;369566 291715;291716;291717;291718;291719 291715 4 RLVHQNSASDDAEASMISK Oxidation (M) 2073.9749 0.97493082 2328 Q13616 CUL1 Cullin-1 yes yes 0 1 1 By MS/MS 2 0 2 2 29.872 24.252 3;4 1.4773E-15 34172 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.89 104.89 115520000 115520000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44152 2328 39575 369567;369568 291720;291721 291721 3796 1 RLVLDPGEAPLVPVYSGK Unmodified 1909.0673 0.067298289 3409 Q8NCF5 NFATC2IP NFATC2-interacting protein yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 82.302 82.418 3 0.011831 95371 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 26.344 21.818 60393000 0 0 0 0 2197100 0 2790200 4414100 4530600 7361100 6046000 5446800 0 7851200 19756000 44153 3409 39576 369569;369570;369571;369572;369573;369574;369575;369576;369577 291722 291722 1 RLVMAESEK Unmodified 1061.5539 0.55392962 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 24.764 19.687 2 0.02372 27939 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 103.88 25.108 118040000 118040000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44154 2459 39577 369578 291723 291723 1 RLVMAESEK Oxidation (M) 1077.5488 0.54884425 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 13.166 10.01 2 0.02369 15410 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.941 18.682 67696000 66019000 0 1677500 0 0 0 0 0 0 0 0 0 0 0 0 44155 2459 39577 369579;369580 291724 291724 0 RLVNCEPIGTQASK Unmodified 1571.809 0.80897511 2086 Q03001 DST Dystonin yes yes 0 0 1 By MS/MS 2 0 1 1 42.809 36.074 3 0.0003223 49669 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.115 57.828 11464000 11464000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44156 2086 39578 369581 291725 291725 1 RLVPGGGATEIELAK Unmodified 1509.8515 0.85149185 1641 P50990 CCT8 T-complex protein 1 subunit theta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.17 4 3 24 3 2 2 2 2 2 2 2 2 2 2 2 2 2 2 61.268 60.179 2;3 4.381E-45 67322 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 118.51 106.34 3648200000 31430000 376750000 42450000 110010000 87979000 318070000 168150000 172260000 163010000 304120000 373930000 380650000 226830000 264870000 627670000 44157 1641 39579 369582;369583;369584;369585;369586;369587;369588;369589;369590;369591;369592;369593;369594;369595;369596;369597;369598;369599;369600;369601;369602;369603;369604;369605;369606;369607;369608;369609;369610;369611;369612 291726;291727;291728;291729;291730;291731;291732;291733;291734;291735;291736;291737;291738;291739;291740;291741;291742;291743;291744;291745;291746;291747;291748;291749;291750;291751;291752;291753;291754 291739 22 RLVQSPNSYFMDVK Oxidation (M) 1698.8399 0.83994089 3032;1460 P42677;Q71UM5 RPS27;RPS27L 40S ribosomal protein S27;40S ribosomal protein S27-like no no 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 2 1 1 1 2 1 1 61.867 62.053 2;3 0.0019559 70908 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 42.191 38.089 141470000 0 0 0 6051800 0 20842000 0 18193000 14030000 5482400 5155500 33900000 25582000 0 12234000 44158 1460;3032 39580 369613;369614;369615;369616;369617;369618;369619;369620;369621;369622;369623 291755;291756 291755 2291 2 RLVQSPNSYFMDVK Unmodified 1682.845 0.84502627 3032;1460 P42677;Q71UM5 RPS27;RPS27L 40S ribosomal protein S27;40S ribosomal protein S27-like no no 0 0 1 By MS/MS 2 0 1 1 78.54 70.409 3 0.00025952 92549 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.414 49.438 23989000 23989000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44159 1460;3032 39580 369624 291757 291757 1 RLVVLDEELEGISPDELK Unmodified 2053.0943 0.094300901 1823 P60983 GMFB Glia maturation factor beta yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 90.445 84.603 3 0.00015205 108208 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.249 57.013 26943000 26943000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44160 1823 39581 369625;369626 291758;291759 291759 2 RLYMGEIQ Oxidation (M) 1024.5012 0.50116577 3798 Q96DI7 SNRNP40 U5 small nuclear ribonucleoprotein 40 kDa protein yes yes 0 1 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 39.639 34.198 2 0.045382 47408 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.799 53.128 77229000 56904000 20326000 0 0 0 0 0 0 0 0 0 0 0 0 0 44161 3798 39582 369627;369628;369629 291760;291761 291761 0 RLYPAVDEQETPLPR Unmodified 1782.9264 0.92644771 3984 Q96S59 RANBP9 Ran-binding protein 9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 63.386 62.772 3 2.4603E-19 71354 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 87.566 74.447 144150000 17462000 0 0 5417700 0 8621200 7485300 0 7511400 12306000 14065000 15283000 15554000 15710000 24739000 44162 3984 39583 369630;369631;369632;369633;369634;369635;369636;369637;369638;369639;369640 291762;291763;291764;291765;291766;291767;291768;291769;291770;291771;291772;291773 291772 12 RLYSLALHPNAFK Unmodified 1528.8514 0.85143227 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 1 By MS/MS 10 0 1 1 64.993 65.545 3 0.00019051 74240 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.728 64.574 12371000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12371000 44163 1986 39584 369641 291774 291774 1 RLYYEGLQDK Unmodified 1283.651 0.65100113 230 O14964 HGS Hepatocyte growth factor-regulated tyrosine kinase substrate yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 41.118 41.536 2 0.013904 46219 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 103.26 61.807 28101000 0 0 0 0 0 3751300 0 0 0 4020000 2561600 6112700 3387000 0 8268500 44164 230 39585 369642;369643;369644;369645;369646;369647 291775;291776 291775 2 RMAEAELVQEGK Unmodified 1359.6816 0.68164933 1310 P31944 CASP14 Caspase-14;Caspase-14 subunit p17, mature form;Caspase-14 subunit p10, mature form;Caspase-14 subunit p20, intermediate form;Caspase-14 subunit p8, intermediate form yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 33.628 33.758 3 9.9877E-07 37687 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 111.79 101.01 94778000 0 0 0 34882000 5975700 0 4406100 8669900 2997300 7947800 12054000 10668000 7176300 0 0 44165 1310 39586 369648;369649;369650;369651;369652;369653;369654;369655;369656 291777;291778;291779;291780;291781;291782;291783;291784;291785;291786;291787 291786 11 RMAEAELVQEGK Oxidation (M) 1375.6766 0.67656396 1310 P31944 CASP14 Caspase-14;Caspase-14 subunit p17, mature form;Caspase-14 subunit p10, mature form;Caspase-14 subunit p20, intermediate form;Caspase-14 subunit p8, intermediate form yes yes 0 1 1 By MS/MS By matching By MS/MS By matching 10 0 4 1 1 1 1 23.533 23.614 3 0.0010408 25200 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 58.098 46.863 51384000 0 0 0 42203000 1053100 0 0 0 0 4778400 0 0 0 0 3348600 44166 1310 39586 369657;369658;369659;369660 291788 291788 1941 1 RMAEFGPDSGGR Unmodified 1278.5775 0.57751861 673 O95619 YEATS4 YEATS domain-containing protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 28.656 28.786 3 0.0098185 30008 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 37.594 23.63 51214000 0 0 0 0 5457500 7214600 5734800 0 5472300 0 10767000 0 9308400 7260200 0 44167 673 39587 369661;369662;369663;369664;369665;369666;369667 291789;291790;291791;291792;291793 291793 5 RMAGTAFDFENMK Oxidation (M) 1532.6752 0.67518375 1294 P31150 GDI1 Rab GDP dissociation inhibitor alpha yes yes 0 1 1 By MS/MS 2 0 2 2 66.67 58.394 3 0.0012798 74636 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.104 60.473 60480000 60480000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44168 1294 39588 369668;369669 291794;291795 291794 1905;1906 1 RMAGTAFDFENMK Unmodified 1516.6803 0.68026913 1294 P31150 GDI1 Rab GDP dissociation inhibitor alpha yes yes 0 0 1 By MS/MS 2 0 1 1 76.675 68.544 3 0.00067215 90417 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.271 77.227 29770000 29770000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44169 1294 39588 369670 291796 291796 1 RMATELSDAILEGYPK Unmodified 1792.9029 0.90293508 4829 Q9P2W1 PSMC3IP Homologous-pairing protein 2 homolog yes yes 0 0 1 By MS/MS 2 0 1 1 85.44 77.31 3 0.0020676 100908 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.768 49.717 6611900 6611900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44170 4829 39589 369671 291797 291797 1 RMATELSDAILEGYPK Oxidation (M) 1808.8978 0.8978497 4829 Q9P2W1 PSMC3IP Homologous-pairing protein 2 homolog yes yes 0 1 1 By MS/MS 2 0 1 1 77.112 74.421 3 0.031152 90584 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 43.791 25.427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44171 4829 39589 369672 291798 291798 1 RMATEVAADALGEEWK Oxidation (M) 1791.8461 0.84614848 1909 P62753 RPS6 40S ribosomal protein S6 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.42 3.88 6 1 5 2 3 2 1 1 1 1 1 70.385 67.302 2;3 2.479E-10 88407 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 111.79 66.425 258800000 66756000 58509000 30480000 6552000 7499900 0 0 0 0 0 21974000 0 24136000 0 42890000 44172 1909 39590 369673;369674;369675;369676;369677;369678;369679;369680;369681;369682;369683;369684 291799;291800;291801;291802;291803;291804;291805;291806;291807;291808 291803 3084 6 RMATEVAADALGEEWK Unmodified 1775.8512 0.85123386 1909 P62753 RPS6 40S ribosomal protein S6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 4 3.46 3 1 1 1 1 1 77.591 73.8 3 7.7586E-05 94758 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.453 78.308 174160000 120470000 33049000 5455600 0 0 0 0 0 0 0 0 0 0 0 15185000 44173 1909 39590 369685;369686;369687;369688 291809;291810;291811;291812 291811 3 RMDAPASAAAVR Unmodified 1214.619 0.6189895 333 O43488 AKR7A2 Aflatoxin B1 aldehyde reductase member 2 yes yes 0 0 1 By matching By matching By MS/MS 10 0 3 1 1 1 25.862 26.253 3 0.0043821 27119 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.071 35.046 15175000 0 0 0 0 0 0 1642500 0 0 0 8388100 0 0 0 5144700 44174 333 39591 369689;369690;369691 291813 291813 0 RMDDPECYFNSLPK Oxidation (M) 1786.7655 0.76545532 2998 Q6YP21 CCBL2 Kynurenine--oxoglutarate transaminase 3 yes yes 0 1 1 By MS/MS 2 0 1 1 75.069 72.221 3 0.0031606 88003 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 49.482 46.456 10665000 0 0 10665000 0 0 0 0 0 0 0 0 0 0 0 0 44175 2998 39592 369692 291814 291814 4615 1 RMDDPECYFNSLPK Unmodified 1770.7705 0.7705407 2998 Q6YP21 CCBL2 Kynurenine--oxoglutarate transaminase 3 yes yes 0 0 1 By MS/MS 2 0 1 1 79.463 76.889 3 0.008958 93360 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 33.796 29.327 4497300 0 0 4497300 0 0 0 0 0 0 0 0 0 0 0 0 44176 2998 39592 369693 291815 291815 1 RMDEISDHAK Oxidation (M) 1216.5506 0.55063516 1751 P55010 EIF5 Eukaryotic translation initiation factor 5 yes yes 0 1 1 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 2 1 2 1 6.4819 6.6285 3 0.007116 4126 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.419 34.004 55697000 0 0 0 6005900 0 0 3756000 3154600 0 9952300 0 8697900 6900900 3710300 13519000 44177 1751 39593 369694;369695;369696;369697;369698;369699;369700;369701;369702;369703;369704 291816;291817;291818 291816 2851 3 RMEELHNQEMQK 2 Oxidation (M) 1603.7083 0.70827479 1151 P23246 SFPQ Splicing factor, proline- and glutamine-rich yes yes 0 2 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 6.0616 6.2004 3 0.00054268 3821 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 59.871 58.037 182290000 0 0 0 16074000 0 14756000 32277000 10720000 13343000 1100600 25897000 1438800 20717000 17153000 28814000 44178 1151 39594 369705;369706;369707;369708;369709;369710;369711;369712;369713;369714;369715 291819;291820;291821;291822;291823;291824 291819 1655;1656 6 RMEELHNQEMQK Unmodified 1571.7184 0.71844555 1151 P23246 SFPQ Splicing factor, proline- and glutamine-rich yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 17.15 17.365 3 0.00031259 16199 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 71.888 66.75 183380000 0 0 0 9199200 0 10481000 14888000 9195700 9997000 12447000 14490000 38054000 12371000 15082000 37176000 44179 1151 39594 369716;369717;369718;369719;369720;369721;369722;369723;369724;369725;369726;369727 291825;291826;291827;291828;291829;291830;291831;291832;291833;291834;291835;291836;291837 291831 11 RMEELHNQEMQK Oxidation (M) 1587.7134 0.71336017 1151 P23246 SFPQ Splicing factor, proline- and glutamine-rich yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 2 1 1 1 2 1 2 2 1 9.4222 9.5501 3 6.0146E-06 8456 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 101.32 95.836 145690000 0 0 0 8884500 3095800 6509200 10758000 0 8598200 7277400 43644000 44136000 0 0 12784000 44180 1151 39594 369728;369729;369730;369731;369732;369733;369734;369735;369736;369737;369738;369739;369740 291838;291839;291840;291841;291842;291843;291844;291845;291846;291847 291845 1655;1656 6 RMEELHNQEVQK Oxidation (M) 1555.7413 0.74128948 2508 Q15233 NONO Non-POU domain-containing octamer-binding protein yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 2 1 1 1 8.607 8.754 3;4 2.507E-05 5811 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 88.075 51.772 536070000 0 0 0 34677000 26259000 33791000 0 20630000 0 40336000 177750000 95931000 44179000 0 62520000 44181 2508 39595 369741;369742;369743;369744;369745;369746;369747;369748;369749;369750 291848;291849;291850;291851;291852;291853;291854;291855;291856;291857 291851 4127 9 RMEELHNQEVQK Unmodified 1539.7464 0.74637486 2508 Q15233 NONO Non-POU domain-containing octamer-binding protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 1 2 1 1 1 2 2 2 2 2 15.434 15.615 2;3 1.8157E-07 15686 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 117.07 95.313 825230000 0 0 0 26593000 17672000 37579000 50976000 40822000 28538000 54898000 0 149980000 85561000 123310000 209300000 44182 2508 39595 369751;369752;369753;369754;369755;369756;369757;369758;369759;369760;369761;369762;369763;369764;369765;369766;369767 291858;291859;291860;291861;291862;291863;291864;291865;291866;291867;291868;291869;291870;291871;291872;291873 291858 12 RMEIQEAIK Unmodified 1116.5961 0.59612879 3688 Q92925 SMARCD2 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 yes yes 0 0 1 By MS/MS 2 0 1 1 48.334 40.62 2 0.031723 56217 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.111 46.044 47047000 47047000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44183 3688 39596 369768 291874 291874 0 RMETEESRK Unmodified 1164.5557 0.55572054 4263 Q9BZE4 GTPBP4 Nucleolar GTP-binding protein 1 yes yes 0 0 2 By MS/MS 2 0 1 1 3.4553 0.14197 3 0.044448 3606 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.028 51.76 7865800 7865800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44184 4263 39597 369769 291875 291875 0 RMFGGPGTASRPSSSR Oxidation (M) 1665.8005 0.80053569 870 P08670 VIM Vimentin yes yes 0 1 2 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 14.988 15.179 4 1.7184E-05 13946 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.358 76.358 238620000 0 0 0 19602000 17000000 17536000 0 16669000 0 16607000 31287000 38457000 28896000 19932000 32635000 44185 870 39598 369770;369771;369772;369773;369774;369775;369776;369777;369778;369779 291876;291877;291878;291879;291880;291881;291882;291883;291884 291877 1122 1 RMFGGPGTASRPSSSR Unmodified 1649.8056 0.80562107 870 P08670 VIM Vimentin yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 31 2 3 2 3 3 3 2 2 2 3 3 3 22.55 22.751 3;4 5.1067E-15 23660 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 79.81 73.189 772910000 0 0 0 34115000 31592000 64664000 36383000 52356000 48227000 63237000 86763000 125350000 65443000 76684000 88089000 44186 870 39598 369780;369781;369782;369783;369784;369785;369786;369787;369788;369789;369790;369791;369792;369793;369794;369795;369796;369797;369798;369799;369800;369801;369802;369803;369804;369805;369806;369807;369808;369809;369810 291885;291886;291887;291888;291889;291890;291891;291892;291893;291894;291895;291896;291897;291898;291899;291900;291901;291902;291903 291887 6 RMGESDDSILR Unmodified 1277.6034 0.60339901 1948 P63220 RPS21 40S ribosomal protein S21 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 2 1 1 1 33.495 34.011 3 1.2234E-11 35986 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 134.13 120.73 23653000 0 0 0 0 0 0 0 0 0 0 0 0 0 5525300 18127000 44187 1948 39599 369811;369812;369813;369814;369815 291904;291905;291906;291907;291908 291904 5 RMGESDDSILR Oxidation (M) 1293.5983 0.59831364 1948 P63220 RPS21 40S ribosomal protein S21 yes yes 0 1 1 By matching By MS/MS By MS/MS 10 0 3 1 1 1 23.736 23.964 3 0.0071873 24018 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 63.473 50.517 12390000 0 0 0 0 0 0 1772500 0 0 0 0 0 3336300 7281600 0 44188 1948 39599 369816;369817;369818 291909 291909 3127 0 RMGIVSDYEK Oxidation (M) 1212.5809 0.58087266 4311 Q9GZZ9 UBA5 Ubiquitin-like modifier-activating enzyme 5 yes yes 0 1 1 By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 25.119 24.345 2;3 0.0075971 25780 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 42.802 21.932 95169000 80254000 0 0 0 2340700 3287100 2171900 0 1532200 3358400 0 0 0 2224500 0 44189 4311 39600 369819;369820;369821;369822;369823;369824;369825 291910;291911 291910 5774 1 RMGIVSDYEK Unmodified 1196.586 0.58595803 4311 Q9GZZ9 UBA5 Ubiquitin-like modifier-activating enzyme 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 2 1 1 1 1 1 1 1 1 1 1 1 37.253 36.399 2;3 0.013189 51688 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.111 40.394 241050000 151310000 0 0 0 2394500 7014600 3332400 5142900 3173000 11975000 7869500 8780400 9923600 11258000 18882000 44190 4311 39600 369826;369827;369828;369829;369830;369831;369832;369833;369834;369835;369836;369837;369838 291912;291913;291914;291915;291916;291917;291918;291919 291914 7 RMGMACGLESGSCSAEDLK 2 Oxidation (M) 2089.8537 0.85369475 2387 Q14186 TFDP1 Transcription factor Dp-1 yes yes 0 2 1 By MS/MS 2 0 1 1 41.175 34.494 3 6.8313E-05 47728 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 59.512 54.895 5976300 5976300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44191 2387 39601 369839 291920;291921 291921 3881;3882 2 RMGMACGLESGSCSAEDLK Oxidation (M) 2073.8588 0.85878013 2387 Q14186 TFDP1 Transcription factor Dp-1 yes yes 0 1 1 By MS/MS 2 0 2 2 50.134 42.296 3 8.3995E-24 56530 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 115.34 106.29 22793000 22793000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44192 2387 39601 369840;369841 291922;291923 291922 3881;3882 2 RMGMACGLESGSCSAEDLK Unmodified 2057.8639 0.86386551 2387 Q14186 TFDP1 Transcription factor Dp-1 yes yes 0 0 1 By MS/MS 2 0 1 1 60.463 52.222 3 1.8766E-13 70792 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.92 97.702 19286000 19286000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44193 2387 39601 369842 291924 291924 1 RMGPGAASGGERPNLK Unmodified 1596.8155 0.81545747 4338 Q9H0U4 RAB1B Ras-related protein Rab-1B yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 1 2 2 1 2 2 2 2 2 2 2 23.352 23.601 3;4 3.5651E-10 24894 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 97.417 81.872 1088100000 0 0 0 19732000 19646000 57472000 57824000 43769000 48625000 112090000 154270000 181850000 121950000 119790000 151090000 44194 4338 39602 369843;369844;369845;369846;369847;369848;369849;369850;369851;369852;369853;369854;369855;369856;369857;369858;369859;369860;369861;369862;369863 291925;291926;291927;291928;291929;291930;291931;291932;291933;291934;291935;291936;291937;291938;291939;291940;291941;291942;291943 291933 14 RMGPGAASGGERPNLK Oxidation (M) 1612.8104 0.8103721 4338 Q9H0U4 RAB1B Ras-related protein Rab-1B yes yes 0 1 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 2 2 2 1 2 2 2 2 1 1 1 16.134 16.313 3;4 3.8704E-11 16301 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 97.797 81.857 585720000 0 0 0 0 29263000 54287000 51895000 31617000 60661000 74093000 54127000 145610000 2123500 36714000 45328000 44195 4338 39602 369864;369865;369866;369867;369868;369869;369870;369871;369872;369873;369874;369875;369876;369877;369878;369879;369880;369881 291944;291945;291946;291947;291948;291949;291950;291951;291952;291953;291954;291955;291956;291957 291951 5799 7 RMGPGATAGGAEK Oxidation (M) 1217.5823 0.58226964 1911 P62820 RAB1A Ras-related protein Rab-1A yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.08 2.5 2 1 22 2 1 2 2 2 2 1 2 2 2 2 1 2 2 6.1439 5.8667 2;3 6.0228E-06 2952 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 100.55 57.307 953980000 282950000 0 14318000 34186000 31029000 36804000 54079000 12398000 40313000 68726000 92283000 97147000 57742000 58441000 73558000 44196 1911 39603 369882;369883;369884;369885;369886;369887;369888;369889;369890;369891;369892;369893;369894;369895;369896;369897;369898;369899;369900;369901;369902;369903;369904;369905;369906 291958;291959;291960;291961;291962;291963;291964;291965;291966;291967;291968;291969;291970;291971;291972;291973;291974;291975;291976;291977 291971 3088 13 RMGPGATAGGAEK Unmodified 1201.5874 0.58735502 1911 P62820 RAB1A Ras-related protein Rab-1A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.67 1.6 1 23 1 2 2 2 2 2 2 2 1 2 2 2 2 9.6731 9.6225 2;3 3.7376E-13 8093 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 116.55 88.804 1200800000 365360000 0 0 30675000 33909000 39074000 64643000 54222000 34287000 60164000 112860000 132650000 76762000 63426000 132740000 44197 1911 39603 369907;369908;369909;369910;369911;369912;369913;369914;369915;369916;369917;369918;369919;369920;369921;369922;369923;369924;369925;369926;369927;369928;369929;369930 291978;291979;291980;291981;291982;291983;291984;291985;291986;291987;291988;291989;291990;291991;291992;291993;291994;291995;291996;291997;291998;291999 291981 5 RMHVQLSTSR Unmodified 1213.635 0.63497391 4209 Q9BWF3;Q9BQ04 RBM4;RBM4B RNA-binding protein 4;RNA-binding protein 4B yes no 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 22.073 22.626 3 0.034703 22295 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 30.392 15.381 26206000 0 0 0 0 0 0 0 0 0 0 0 9653100 5440700 0 11112000 44198 4209 39604 369931;369932;369933 292000 292000 1 RMIETAQVDER Unmodified 1346.6612 0.66124824 4984 Q9UL25 RAB21 Ras-related protein Rab-21 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 27.523 27.726 3 0.00030443 29778 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 65.563 46.463 138690000 0 0 0 4939700 6453800 12239000 9009400 9802300 0 12767000 21773000 22057000 10585000 11503000 17562000 44199 4984 39605 369934;369935;369936;369937;369938;369939;369940;369941;369942;369943;369944 292001;292002;292003;292004;292005;292006;292007;292008;292009;292010;292011;292012;292013 292006 12 RMIETAQVDER Oxidation (M) 1362.6562 0.65616287 4984 Q9UL25 RAB21 Ras-related protein Rab-21 yes yes 0 1 1 By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 16 1 2 1 2 1 2 2 1 1 1 2 19.205 19.373 3 0.00015532 19862 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 78.692 47.507 111060000 0 0 0 6277300 9531900 4316800 11254000 4948800 11033000 16760000 7875100 13918000 0 6419200 18722000 44200 4984 39605 369945;369946;369947;369948;369949;369950;369951;369952;369953;369954;369955;369956;369957;369958;369959;369960 292014;292015;292016;292017;292018;292019;292020;292021;292022 292015 6332 2 RMIETAQVDERAK Oxidation (M) 1561.7882 0.78823967 4984 Q9UL25 RAB21 Ras-related protein Rab-21 yes yes 0 1 2 By MS/MS By MS/MS 2 0 3 2 1 21.567 17.762 3 0.016862 25186 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.825 35.472 39143000 36266000 0 2876800 0 0 0 0 0 0 0 0 0 0 0 0 44201 4984 39606 369961;369962;369963 292023;292024 292024 6332 1 RMLDPSIK Unmodified 958.52699 0.52698659 4772 Q9NZL9 MAT2B Methionine adenosyltransferase 2 subunit beta yes yes 0 0 1 By MS/MS 2 0 1 1 42.797 36.061 2 0.0090069 49644 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 121.62 64.06 437870000 437870000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44202 4772 39607 369964 292025 292025 1 RMLDPSIK Oxidation (M) 974.5219 0.52190122 4772 Q9NZL9 MAT2B Methionine adenosyltransferase 2 subunit beta yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 28.222 23.31 2 0.025448 32341 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.568 28.557 170730000 158880000 11845000 0 0 0 0 0 0 0 0 0 0 0 0 0 44203 4772 39607 369965;369966 292026 292026 0 RMLEAQLER Unmodified 1144.6023 0.6022768 5278 Q9Y6D9 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes yes 0 0 1 By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 35.291 35.6 3 0.023861 37858 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.329 20.463 28929000 0 0 0 0 0 3132000 0 2382200 0 3854500 3641100 0 3672300 3774600 8472400 44204 5278 39608 369967;369968;369969;369970;369971;369972;369973 292027 292027 1 RMLEESNLSFLK Oxidation (M) 1481.7548 0.75481428 2447 Q14790 CASP8 Caspase-8;Caspase-8 subunit p18;Caspase-8 subunit p10 yes yes 0 1 1 By MS/MS 2 0 1 1 75.171 67.04 3 0.00036812 88574 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.554 78.189 6863400 6863400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44205 2447 39609 369974 292028 292028 4014 1 RMNDILNHK Unmodified 1139.587 0.58696109 2348 Q13867 BLMH Bleomycin hydrolase yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 22.021 22.347 3 0.010711 22679 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 38.276 23.602 37509000 0 0 0 0 0 4231300 1269800 0 0 6899800 4319100 9770600 0 2955100 8063700 44206 2348 39610 369975;369976;369977;369978;369979;369980;369981 292029;292030 292030 2 RMNDILNHK Oxidation (M) 1155.5819 0.58187571 2348 Q13867 BLMH Bleomycin hydrolase yes yes 0 1 1 By MS/MS 10 0 1 1 11.367 11.23 3 0.018537 10150 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 68.371 44.341 38218000 0 0 0 38218000 0 0 0 0 0 0 0 0 0 0 0 44207 2348 39610 369982 292031 292031 3834 0 RMPPPANLPSLK Unmodified 1319.7384 0.73837635 5216;1546;2736 Q5JSZ5;Q9Y520;P48634 PRRC2B;PRRC2C;PRRC2A Protein PRRC2B;Protein PRRC2C;Protein PRRC2A no no 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 58.166 58.371 3 0.0030322 65596 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.412 65.258 46553000 0 0 0 0 2741700 0 3886200 0 4578800 4789500 4345600 8968000 4066400 3941100 9236000 44208 2736;5216;1546 39611 369983;369984;369985;369986;369987;369988;369989;369990;369991 292032;292033;292034 292033 2 RMQALEPYPANESSK Oxidation (M) 1735.8199 0.81993373 296 O43148 RNMT mRNA cap guanine-N7 methyltransferase yes yes 0 1 1 By MS/MS By matching By matching 2 0 4 2 1 1 36.954 31.641 2;3 0.0038159 43955 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.153 57.344 143420000 127600000 12456000 3367200 0 0 0 0 0 0 0 0 0 0 0 0 44209 296 39612 369992;369993;369994;369995 292035;292036 292035 383 1 RMQALEPYPANESSK Unmodified 1719.825 0.82501911 296 O43148 RNMT mRNA cap guanine-N7 methyltransferase yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 48.301 41.762 2;3 3.0983E-13 58200 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 124.12 101.64 197450000 190370000 0 7080400 0 0 0 0 0 0 0 0 0 0 0 0 44210 296 39612 369996;369997;369998 292037;292038;292039;292040 292039 3 RMQNDTAENETTEK Unmodified 1665.7264 0.72642727 2117 Q05682 CALD1 Caldesmon yes yes 0 0 1 By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 7.3607 7.5491 3 0.0012831 5039 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.797 35.183 18642000 0 0 0 0 724960 0 0 0 994760 1411000 4413100 3569000 2160800 2046600 3322200 44211 2117 39613 369999;370000;370001;370002;370003;370004;370005;370006 292041;292042;292043 292041 2 RMQSLQLDCVAVPSSR Oxidation (M) 1861.9139 0.91385089 2313 Q13546 RIPK1 Receptor-interacting serine/threonine-protein kinase 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 60.42 60.556 3 3.7095E-05 69167 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 73.208 61.938 93134000 0 0 0 0 2963400 9319300 8883300 6999500 7954200 12060000 11105000 12412000 14184000 7253700 0 44212 2313 39614 370007;370008;370009;370010;370011;370012;370013;370014;370015;370016 292044;292045;292046;292047;292048;292049;292050;292051;292052;292053 292044 3776 10 RMQSLQLDCVAVPSSR Unmodified 1845.9189 0.91893627 2313 Q13546 RIPK1 Receptor-interacting serine/threonine-protein kinase 1 yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 66.58 66.91 3 6.4112E-05 75986 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.601 61.262 15010000 0 0 0 0 0 0 0 0 0 3633400 0 0 0 0 11376000 44213 2313 39614 370017;370018 292054 292054 1 RMQVEHPEK Unmodified 1152.571 0.57097667 3395 Q8NBJ5 COLGALT1 Procollagen galactosyltransferase 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 8.4351 7.8483 3 0.0011811 13685 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.309 70.279 127590000 113250000 0 0 0 0 0 0 0 708630 0 5588000 0 0 3015300 5029500 44214 3395 39615 370019;370020;370021;370022;370023 292055;292056;292057;292058 292057 3 RMQVEHPEK Oxidation (M) 1168.5659 0.56589129 3395 Q8NBJ5 COLGALT1 Procollagen galactosyltransferase 1 yes yes 0 1 1 By MS/MS By matching 2 0 2 1 1 6.0713 3.2526 2 0.017297 5777 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.948 57.874 28404000 26638000 0 1765600 0 0 0 0 0 0 0 0 0 0 0 0 44215 3395 39615 370024;370025 292059 292059 4954 0 RMSNELENYFK Oxidation (M) 1445.6609 0.66091389 3474 Q8TAP9 MPLKIP M-phase-specific PLK1-interacting protein yes yes 0 1 1 By MS/MS 2 0 1 1 65.76 57.472 3 0.0025727 77179 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.944 56.742 20711000 20711000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44216 3474 39616 370026 292060 292060 4999 1 RMSNELENYFK Unmodified 1429.666 0.66599927 3474 Q8TAP9 MPLKIP M-phase-specific PLK1-interacting protein yes yes 0 0 1 By MS/MS 2 0 1 1 75.66 67.53 3 0.013639 89181 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.442 30.641 5652200 5652200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44217 3474 39616 370027 292061 292061 1 RMSPKPELTEEQK Oxidation (M) 1587.7927 0.79265635 1431 P41208 CETN2 Centrin-2 yes yes 0 1 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 16.02 15.586 3 0.00073385 24250 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.746 64.214 115340000 71711000 0 2190000 1850900 1500300 1220500 1646400 1916300 924020 4297200 9440700 7003600 5725100 0 5911800 44218 1431 39617 370028;370029;370030;370031;370032;370033;370034;370035;370036;370037;370038;370039;370040 292062;292063 292063 2248 1 RMSPKPELTEEQK Unmodified 1571.7977 0.79774172 1431 P41208 CETN2 Centrin-2 yes yes 0 0 2 By MS/MS 2 0 1 1 29.807 24.187 3 0.0025085 33911 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 92.939 82.888 114280000 114280000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44219 1431 39617 370041 292064 292064 1 RMSVTEGGIK Unmodified 1076.5648 0.56482866 1179 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 29.79 25.377 2 2.8173E-05 35401 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 129.85 74.175 179140000 168590000 0 10553000 0 0 0 0 0 0 0 0 0 0 0 0 44220 1179 39618 370042;370043 292065 292065 1 RMTGSEFDFEEMK Oxidation (M) 1621.6752 0.67524333 1620 P50395 GDI2 Rab GDP dissociation inhibitor beta yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2 0 8 3 3 2 63.611 57.344 2;3 9.4636E-05 65095 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 95.264 93.638 334060000 114610000 155600000 63853000 0 0 0 0 0 0 0 0 0 0 0 0 44221 1620 39619 370044;370045;370046;370047;370048;370049;370050;370051 292066;292067;292068;292069;292070;292071;292072;292073 292072 2600;2601 6 RMTGSEFDFEEMK Unmodified 1605.6803 0.68032871 1620 P50395 GDI2 Rab GDP dissociation inhibitor beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 5.44 4.09 1 4 4 2 2 1 1 1 1 1 73.272 71.493 2;3 0.00080604 87978 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.527 72.142 183990000 45905000 84452000 10121000 0 0 0 0 0 0 0 3910300 3619100 0 5144900 30838000 44222 1620 39619 370052;370053;370054;370055;370056;370057;370058;370059;370060 292074;292075;292076;292077;292078;292079;292080;292081;292082 292081 8 RMTGSEFDFEEMK 2 Oxidation (M) 1637.6702 0.67015795 1620 P50395 GDI2 Rab GDP dissociation inhibitor beta yes yes 0 2 1 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 2 2 1 50.164 44.084 2;3 0.00091639 55040 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 64.798 61.306 189580000 115520000 48170000 25890000 0 0 0 0 0 0 0 0 0 0 0 0 44223 1620 39619 370061;370062;370063;370064;370065 292083;292084;292085;292086;292087;292088 292085 2600;2601 3 RMVIPNQPPLTATK Unmodified 1564.8759 0.87593247 3706 Q93052 LPP Lipoma-preferred partner yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 60.914 60.333 3 0.00049911 68431 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 44.457 29.77 82074000 10688000 0 0 0 0 0 3768400 3461100 2314300 6421900 8944100 13374000 3076100 9303900 20723000 44224 3706 39620 370066;370067;370068;370069;370070;370071;370072;370073;370074;370075 292089;292090;292091;292092;292093;292094;292095;292096;292097 292097 7 RMVIPNQPPLTATK Oxidation (M) 1580.8708 0.87084709 3706 Q93052 LPP Lipoma-preferred partner yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 48.907 49.2 3 0.015437 56170 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 42.209 34.839 91083000 0 0 0 0 4962100 0 0 7030800 0 0 15432000 26761000 0 15986000 20911000 44225 3706 39620 370076;370077;370078;370079;370080;370081 292098 292098 5289 0 RMVVPAALK Unmodified 983.59501 0.59500658 1415 P40429;Q6NVV1 RPL13A;RPL13AP3 60S ribosomal protein L13a;Putative 60S ribosomal protein L13a protein RPL13AP3 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 44.78 45.017 2 0.034064 50430 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 89.142 47.49 220730000 0 0 0 0 10849000 11891000 15233000 13764000 11217000 17277000 22675000 24640000 23240000 28525000 41420000 44226 1415 39621 370082;370083;370084;370085;370086;370087;370088;370089;370090;370091;370092 292099;292100;292101;292102 292099 2 RNAEFLTCNIPTSNASNNMVTTEK Oxidation (M) 2727.2592 0.25922753 1766 P55265 ADAR Double-stranded RNA-specific adenosine deaminase yes yes 0 1 1 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 62.759 61.689 3 6.6385E-10 70486 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 60.278 46.547 37129000 11464000 0 0 1931900 2221500 3831700 3452300 0 0 3903700 0 5093600 0 5229800 0 44227 1766 39622 370093;370094;370095;370096;370097;370098;370099;370100 292103;292104;292105;292106;292107 292103 2884 4 RNAEFLTCNIPTSNASNNMVTTEK Unmodified 2711.2643 0.26431291 1766 P55265 ADAR Double-stranded RNA-specific adenosine deaminase yes yes 0 0 1 By MS/MS 2 0 1 1 75.996 67.866 3 1.4163E-11 89541 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.198 73.069 15909000 15909000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44228 1766 39622 370101 292108;292109 292108 2 RNATSLQHLLSGAK Unmodified 1494.8267 0.82667409 2895 Q6N069 NAA16 N-alpha-acetyltransferase 16, NatA auxiliary subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 49.86 50.191 3 1.3732E-20 56600 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 115.82 95.389 263290000 0 0 0 0 0 0 0 35680000 49603000 16717000 53458000 107830000 0 0 0 44229 2895 39623 370102;370103;370104;370105;370106;370107 292110;292111;292112;292113;292114;292115;292116;292117;292118 292113 9 RNAVPITPTLNR Unmodified 1350.7732 0.77318195 60 CON__P02663 yes yes 0 0 1 By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 8 1 1 1 1 1 1 1 1 48.368 48.479 3 0.0013186 54691 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 44.829 29.242 + 265810000 0 0 0 53931000 60334000 89323000 0 14974000 8875300 4423300 0 20254000 0 0 13698000 44230 60 39624 370108;370109;370110;370111;370112;370113;370114;370115 292119;292120;292121 292119 2 RNCCLLEIQETEAK Unmodified 1762.8342 0.83420359 1696 P52735 VAV2 Guanine nucleotide exchange factor VAV2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 61.894 55.853 3 9.8511E-19 75530 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.273 88.674 40085000 37624000 0 2461100 0 0 0 0 0 0 0 0 0 0 0 0 44231 1696 39625 370116;370117 292122;292123 292122 2 RNDHDDDEDEEVISK Unmodified 1814.7555 0.7554788 2189 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8 3.46 2 6 2 1 1 1 1 1 1 19.503 18.411 3;4 2.9205E-50 25060 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 137.17 127.03 43357000 30587000 0 0 2058700 0 2634800 0 1284000 0 2087800 0 3754100 0 950700 0 44232 2189 39626 370118;370119;370120;370121;370122;370123;370124;370125 292124;292125;292126;292127;292128;292129;292130;292131;292132;292133 292128 9 RNDSTRLTQAEISEQPTMATVVPQVPTSPK Oxidation (M) 3296.6671 0.66706849 3025 Q70E73 RAPH1 Ras-associated and pleckstrin homology domains-containing protein 1 yes yes 0 1 2 By MS/MS 2 0 1 1 75.812 67.682 4 1.9327E-11 89363 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.156 53.792 12654000 12654000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44233 3025 39627 370126 292134 292134 4639 1 RNDTGVFVSDIVK Unmodified 1448.7623 0.7623425 568 O75970 MPDZ Multiple PDZ domain protein yes yes 0 0 1 By matching By MS/MS 2 0 2 1 1 73.968 68.262 3 0.015817 84151 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 29.937 18.228 5221300 3648800 0 1572500 0 0 0 0 0 0 0 0 0 0 0 0 44234 568 39628 370127;370128 292135 292135 1 RNDYDDTIPILDALK Unmodified 1760.8945 0.89447888 4869 Q9UDY8 MALT1 Mucosa-associated lymphoid tissue lymphoma translocation protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 94.791 86.66 3 0.00043452 111994 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.944 68.944 11688000 11688000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44235 4869 39629 370129 292136 292136 1 RNEEAQVHDK Unmodified 1224.5847 0.58471248 3408 Q8NCE0 TSEN2 tRNA-splicing endonuclease subunit Sen2 yes yes 0 0 1 By MS/MS 2 0 1 1 1.7369 -0.41565 3 0.025321 1201 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 43.604 21.518 8722800 0 0 8722800 0 0 0 0 0 0 0 0 0 0 0 0 44236 3408 39630 370130 292137 292137 0 RNEFLGELQK Unmodified 1232.6513 0.65133548 2373;4663 Q14141;Q9NVA2 SEPT6;SEPT11 Septin-6;Septin-11 no no 0 0 1 By MS/MS 2 0 1 1 62.308 54.052 2 0.00012731 73158 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 148.91 22.601 38730000 38730000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44237 2373;4663 39631 370131 292138 292138 0 RNEGVVGGEDYEEVDR Unmodified 1821.8129 0.8129341 3149 Q86UK7 ZNF598 Zinc finger protein 598 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 39.453 39.45 3 0.0060818 43774 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 31.951 28.812 25022000 0 0 0 3243100 2931700 0 5208200 0 0 6857100 0 0 0 0 6781700 44238 3149 39632 370132;370133;370134;370135;370136 292139;292140;292141 292139 3 RNEIDAEPPAK Unmodified 1238.6255 0.62551466 3504 Q8TDN6 BRIX1 Ribosome biogenesis protein BRX1 homolog yes yes 0 0 1 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 20.659 20.871 2 0.016045 21533 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 62.823 37.9 78262000 0 0 0 0 3807800 5507800 4118300 0 3618100 8879800 0 13414000 15171000 9122600 14623000 44239 3504 39633 370137;370138;370139;370140;370141;370142;370143;370144;370145 292142 292142 0 RNELVIR Unmodified 898.53485 0.53484916 947 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 25.376 25.629 2 0.046855 26231 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 121.99 19.275 749890000 0 0 0 33538000 0 69241000 29025000 41764000 17975000 61501000 107150000 71967000 49278000 73482000 194980000 44240 947 39634 370146;370147;370148;370149;370150;370151;370152;370153;370154;370155;370156 292143 292143 0 RNENQLIIFADDTYPR Unmodified 1963.9752 0.97518882 2528 Q15393 SF3B3 Splicing factor 3B subunit 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 3 2 2 1 2 1 1 1 79.244 79.377 3 0.00021796 90860 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 59.872 54.162 99941000 0 0 0 0 0 17870000 0 12281000 12654000 0 0 4190200 10101000 7947500 34898000 44241 2528 39635 370157;370158;370159;370160;370161;370162;370163;370164;370165;370166;370167;370168;370169 292144;292145;292146;292147;292148;292149;292150;292151;292152;292153 292150 9 RNENSEVDTSAGSGSAPSVLHQR Unmodified 2397.1269 0.12689145 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 2 2 1 35.839 36.082 3;4 4.3128E-05 38799 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 39.188 32.087 46410000 0 0 0 0 5286500 3278100 0 0 0 4941100 4362400 0 6985500 8923000 12634000 44242 3443 39636 370170;370171;370172;370173;370174;370175;370176;370177;370178 292154;292155;292156;292157;292158;292159 292156 6 RNESLTATDGLR Unmodified 1331.6793 0.67934115 2795 Q5TCZ1 SH3PXD2A SH3 and PX domain-containing protein 2A yes yes 0 0 1 By MS/MS 10 0 1 1 30.648 31.359 3 0.022229 33585 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 20.29 3.7688 6153600 0 0 0 0 0 0 0 0 0 0 0 6153600 0 0 0 44243 2795 39637 370179 292160 292160 1 RNFELVDSSPCK Unmodified 1450.6875 0.68746299 3859 Q96GX5 MASTL Serine/threonine-protein kinase greatwall yes yes 0 0 1 By MS/MS 2 0 1 1 53.433 45.37 3 0.035221 62272 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 31.526 22.244 8513100 8513100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44244 3859 39638 370180 292161 292161 0 RNFILDQCNVYNSGQR Unmodified 1982.9381 0.93809181 2645 Q1KMD3 HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 2 1 1 1 1 1 1 1 1 1 1 60.62 60.725 3 1.1716E-24 69650 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 107.5 104.83 142480000 0 0 0 2442900 1013300 8304600 4232000 7743300 9041300 10767000 11223000 25588000 16035000 14353000 31735000 44245 2645 39639 370181;370182;370183;370184;370185;370186;370187;370188;370189;370190;370191;370192;370193 292162;292163;292164;292165;292166;292167;292168;292169;292170;292171;292172;292173;292174;292175;292176 292172 15 RNFILDQTNVSAAAQR Unmodified 1802.9387 0.93874373 2046 Q00839 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.32 61.421 3 4.3478E-29 69109 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 140.27 124.1 3447300000 0 0 0 92621000 150560000 376830000 142580000 211500000 273330000 306280000 257760000 483760000 318840000 272900000 560340000 44246 2046 39640 370194;370195;370196;370197;370198;370199;370200;370201;370202;370203;370204;370205 292177;292178;292179;292180;292181;292182;292183;292184;292185;292186;292187;292188;292189;292190;292191;292192;292193;292194;292195;292196;292197;292198;292199;292200;292201;292202;292203;292204 292193 28 RNFILDQTNVSAAAQRR Unmodified 1959.0399 0.03985476 2046 Q00839 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 56.008 56.282 4 0.00026359 64085 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 63.918 53.45 72964000 0 0 0 0 0 10778000 0 5597800 6791300 4459500 0 14480000 5063800 7421100 18372000 44247 2046 39641 370206;370207;370208;370209;370210;370211;370212;370213 292205;292206;292207;292208 292205 4 RNFQEEQINTR Unmodified 1433.7011 0.70113922 3257 Q8IXB1 DNAJC10 DnaJ homolog subfamily C member 10 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 25.342 25.67 3 0.0035063 27155 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 49.081 37.21 46085000 0 0 0 0 3634900 0 0 0 0 7129300 8953500 6344000 0 13729000 6294400 44248 3257 39642 370214;370215;370216;370217;370218;370219 292209;292210;292211;292212;292213;292214 292211 4 RNFQEEQINTRDAK Unmodified 1747.8602 0.86015906 3257 Q8IXB1 DNAJC10 DnaJ homolog subfamily C member 10 yes yes 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 28.559 24.22 3 1.8626E-30 34096 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 175.66 158.03 87931000 86146000 0 1784800 0 0 0 0 0 0 0 0 0 0 0 0 44249 3257 39643 370220;370221 292215 292215 0 RNFSSGTIPGTPGPNGEDGVEQTAIK Unmodified 2628.278 0.27797236 3440 Q8NF64 ZMIZ2 Zinc finger MIZ domain-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 64.037 62.591 3 1.4028E-06 71745 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 41.047 31.461 59574000 19354000 0 2513500 0 4264600 6216600 5207000 0 4458700 6276800 0 0 0 0 11284000 44250 3440 39644 370222;370223;370224;370225;370226;370227;370228;370229 292216;292217;292218;292219;292220;292221 292217 6 RNGPSSSPFSSPASSR Unmodified 1619.7652 0.76519604 35 A8CG34;Q96HA1;A6NF01 POM121C;POM121;POM121B Nuclear envelope pore membrane protein POM 121C;Nuclear envelope pore membrane protein POM 121;Putative nuclear envelope pore membrane protein POM 121B yes no 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 29.853 29.869 3 0.020031 32410 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 25.558 17.777 20474000 0 0 0 1840600 2008900 0 2964300 3105000 3129000 3652800 0 0 3773900 0 0 44251 35 39645 370230;370231;370232;370233;370234;370235;370236 292222 292222 1 RNGSLPDCPPPEDPAIAQLLK Unmodified 2287.1631 0.16306594 4024 Q99570 PIK3R4 Phosphoinositide 3-kinase regulatory subunit 4 yes yes 0 0 1 By MS/MS 2 0 1 1 85.779 83.346 3 0.0015458 100849 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 42.309 38.041 4492800 0 0 4492800 0 0 0 0 0 0 0 0 0 0 0 0 44252 4024 39646 370237 292223;292224 292223 2 RNHDGECTAAPTNR Unmodified 1597.7015 0.70154993 2184 Q12769 NUP160 Nuclear pore complex protein Nup160 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.65 1.63 1 22 1 2 2 2 2 2 1 2 2 1 2 2 2 6.3745 6.3369 3;4 1.0632E-05 3324 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 67.326 62.047 120110000 4371000 0 0 6055300 7463400 10820000 11873000 7809500 6832200 8129400 14562000 9581200 11751000 10368000 10491000 44253 2184 39647 370238;370239;370240;370241;370242;370243;370244;370245;370246;370247;370248;370249;370250;370251;370252;370253;370254;370255;370256;370257;370258;370259;370260 292225;292226;292227;292228;292229;292230;292231;292232;292233;292234;292235;292236 292232 11 RNIFDLCTDTK Unmodified 1381.666 0.66599927 5192 Q9Y4B6 VPRBP Protein VPRBP yes yes 0 0 1 By MS/MS 2 0 1 1 73.071 64.875 3 0.01411 85997 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.915 32.375 9262400 9262400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44254 5192 39648 370261 292237 292237 1 RNIPNVDDK Unmodified 1069.5516 0.55162144 4028 Q99583 MNT Max-binding protein MNT yes yes 0 0 1 By MS/MS 2 0 1 1 23.477 18.502 2 0.033591 26413 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.308 44.061 20277000 20277000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44255 4028 39649 370262 292238 292238 1 RNIPPYFVALVPQEEELDDQK Unmodified 2499.2646 0.26455413 973 P12956 XRCC6 X-ray repair cross-complementing protein 6 yes yes 0 0 1 By MS/MS 10 0 1 1 86.877 87.035 3 0.00051238 100604 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.672 29.45 4322600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4322600 44256 973 39650 370263 292239 292239 1 RNIQQYNSFVSLSV Unmodified 1653.8475 0.84746911 927 P10644 PRKAR1A cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed yes yes 0 0 1 By MS/MS 2 0 1 1 86.462 78.331 2 1.6524E-05 102079 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.22 93.273 17807000 17807000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44257 927 39651 370264 292240 292240 1 RNISHYEEQLVK Unmodified 1514.7841 0.78414057 990 P13861 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 38.152 36.989 3 0.0025378 51918 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.314 34.651 163640000 132490000 0 2801100 0 0 5106700 0 3781500 4056300 4984900 5101800 0 0 5321700 0 44258 990 39652 370265;370266;370267;370268;370269;370270;370271;370272;370273 292241;292242;292243;292244;292245 292243 4 RNIYLMDTSGK Unmodified 1296.6496 0.64962092 1221 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 2 1 1 1 1 1 1 1 1 1 1 44.025 42.886 2;3 0.00038779 46806 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 115.78 83.461 170840000 46803000 0 0 7468700 0 15058000 9928300 6748500 7017700 13827000 9812800 14025000 10695000 0 29456000 44259 1221 39653 370274;370275;370276;370277;370278;370279;370280;370281;370282;370283;370284;370285 292246;292247;292248;292249;292250;292251;292252;292253 292253 6 RNIYLMDTSGK Oxidation (M) 1312.6445 0.64453555 1221 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed yes yes 0 1 1 By MS/MS By matching 2 0 3 2 1 33.974 28.664 2;3 0.012236 40332 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.869 60.496 44489000 43732000 0 757300 0 0 0 0 0 0 0 0 0 0 0 0 44260 1221 39653 370286;370287;370288 292254;292255 292255 1794 2 RNLDIERPTYTNLNR Unmodified 1873.9759 0.97585752 1961;3031;4093;1962 P68363;Q71U36;P0DPH8;P0DPH7;Q6PEY2;Q9NY65;Q9BQE3;P68366 TUBA1B;TUBA1A;TUBA3E;TUBA8;TUBA1C;TUBA4A Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-8 chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain no no 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 1 2 2 2 1 2 1 2 2 2 2 49.499 49.715 3;4 1.5704E-19 55383 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 110.98 96.633 520270000 0 0 0 9699300 5733100 42613000 33710000 60724000 12603000 44295000 26237000 86630000 56877000 51729000 89419000 44261 1961;3031;4093;1962 39654 370289;370290;370291;370292;370293;370294;370295;370296;370297;370298;370299;370300;370301;370302;370303;370304;370305;370306;370307;370308 292256;292257;292258;292259;292260;292261;292262;292263;292264;292265;292266;292267;292268;292269;292270;292271;292272;292273;292274;292275;292276;292277 292270 20 RNLDTGGNK Unmodified 973.49411 0.49410656 2377 Q14151 SAFB2 Scaffold attachment factor B2 yes yes 0 0 1 By MS/MS 2 0 1 1 5.5414 2.164 2 0.032307 4914 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 92.838 51.186 286730000 286730000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44262 2377 39655 370309 292278 292278 0 RNLENDVNSLK Unmodified 1300.6735 0.67352749 455 O75116 ROCK2 Rho-associated protein kinase 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 40.816 35.674 3 0.0005558 45188 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 91.961 68.843 19932000 6225300 0 13706000 0 0 0 0 0 0 0 0 0 0 0 0 44263 455 39656 370310;370311 292279;292280 292280 0 RNLENTQNQIK Unmodified 1356.711 0.71097563 4264 Q9BZF9 UACA Uveal autoantigen with coiled-coil domains and ankyrin repeats yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.72 2 13 1 1 1 2 1 1 1 1 2 1 1 2 15.213 14.899 2;3 0.0043564 14110 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 72.643 34.557 140030000 33942000 0 5761200 4413100 4737700 12140000 0 2174200 0 10640000 15667000 17951000 5948600 7352700 19303000 44264 4264 39657 370312;370313;370314;370315;370316;370317;370318;370319;370320;370321;370322;370323;370324;370325;370326 292281;292282;292283;292284;292285;292286;292287;292288 292287 7 RNLEQENQNLR Unmodified 1412.712 0.71203826 3566 Q8WVV4 POF1B Protein POF1B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 17.745 17.899 3 0.00010958 18244 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 99.752 87.606 301240000 0 0 0 150950000 10451000 9666400 8702000 49087000 0 9017100 14593000 25599000 16006000 7176800 0 44265 3566 39658 370327;370328;370329;370330;370331;370332;370333;370334;370335;370336;370337 292289;292290;292291;292292;292293;292294;292295;292296;292297;292298;292299;292300 292299 11 RNLGSINTELQDVQR Unmodified 1741.9071 0.90710925 492 O75396 SEC22B Vesicle-trafficking protein SEC22b yes yes 0 0 1 By matching By MS/MS By matching By matching By MS/MS 10 0 5 1 1 1 1 1 56.815 56.914 3 0.0088096 64056 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 29.754 19.61 35659000 0 0 0 0 6101900 0 5878000 0 0 6582400 0 8902500 0 8194600 0 44266 492 39659 370338;370339;370340;370341;370342 292301;292302 292302 1 RNLNLVSSTASIK Unmodified 1401.794 0.79397698 4615 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 yes yes 0 0 1 By matching By MS/MS By MS/MS 10 0 3 1 1 1 48.366 48.719 3 0.013785 53877 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 24.935 21.219 15810000 0 0 0 0 0 0 0 3325400 0 5996900 0 0 0 0 6488100 44267 4615 39660 370343;370344;370345 292303 292303 1 RNLQQELETQNQK Unmodified 1627.8278 0.8277963 2072 Q02241 KIF23 Kinesin-like protein KIF23 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.3 2.25 2 21 1 1 2 1 2 2 2 2 2 1 1 2 2 2 32.742 32.468 2;3 9.8022E-08 34561 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 70.806 70.806 270310000 45527000 0 11303000 12804000 10941000 16928000 18702000 20814000 15597000 17494000 16506000 17537000 23385000 14219000 28553000 44268 2072 39661 370346;370347;370348;370349;370350;370351;370352;370353;370354;370355;370356;370357;370358;370359;370360;370361;370362;370363;370364;370365;370366;370367;370368 292304;292305;292306;292307;292308;292309;292310;292311;292312;292313;292314;292315;292316;292317;292318;292319;292320;292321 292319 18 RNLSDIDQSFNK Unmodified 1435.7056 0.7055559 2269 Q13315 ATM Serine-protein kinase ATM yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 51.856 45.212 2;3 7.775E-16 62144 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 153.12 121.7 34736000 22409000 0 12327000 0 0 0 0 0 0 0 0 0 0 0 0 44269 2269 39662 370369;370370;370371 292322;292323;292324 292322 1 RNNEETVMSAR Oxidation (M) 1321.6045 0.60446165 4327 Q9H0G5 NSRP1 Nuclear speckle splicing regulatory protein 1 yes yes 0 1 1 By matching By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 7.0163 7.199 3 0.0021803 5394 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 51.013 34.071 24461000 0 0 0 0 0 3506100 0 4290400 0 0 7100500 3999000 0 0 5565200 44270 4327 39663 370372;370373;370374;370375;370376 292325;292326 292326 5793 2 RNNEETVMSAR Unmodified 1305.6095 0.60954702 4327 Q9H0G5 NSRP1 Nuclear speckle splicing regulatory protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 16.614 16.763 3 0.01792 17181 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 41.48 32.751 39885000 0 0 0 2552800 2479900 3558700 2793700 2452800 2182700 4427000 3839200 6645900 3957600 4995100 0 44271 4327 39663 370377;370378;370379;370380;370381;370382;370383;370384;370385;370386;370387 292327 292327 0 RNNGVVDK Unmodified 900.47773 0.47772821 1307 P31939 ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes yes 0 0 1 By MS/MS 2 0 1 1 2.1087 -1.1859 2 0.016533 2406 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 128.57 50.818 446290000 446290000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44272 1307 39664 370388 292328 292328 1 RNNSLPDENNIAR Unmodified 1511.7441 0.74406667 401 O60447 EVI5 Ecotropic viral integration site 5 protein homolog yes yes 0 0 1 By matching By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 31.296 31.44 3 0.0083195 33675 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 36.107 22.144 17995000 0 0 0 3183100 0 0 3856200 3452300 0 0 0 7503800 0 0 0 44273 401 39665 370389;370390;370391;370392 292329;292330 292330 2 RNNSLQTATENTQAR Unmodified 1702.8347 0.83467259 2768 Q5T1M5 FKBP15 FK506-binding protein 15 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 18.193 17.99 3 4.9341E-31 17754 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 122.63 110.71 203610000 39931000 0 0 8830200 6115500 12038000 8527700 11879000 5293700 13968000 15224000 31722000 20271000 12024000 17789000 44274 2768 39666 370393;370394;370395;370396;370397;370398;370399;370400;370401;370402;370403;370404;370405 292331;292332;292333;292334;292335;292336;292337;292338;292339;292340;292341;292342;292343;292344 292341 14 RNNTITTTSSK Unmodified 1221.6313 0.63132832 472 O75179 ANKRD17 Ankyrin repeat domain-containing protein 17 yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 7.4789 4.3964 2;3 1.4191E-08 7655 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 143.5 116.71 56686000 53308000 0 3377500 0 0 0 0 0 0 0 0 0 0 0 0 44275 472 39667 370406;370407;370408 292345;292346 292345 1 RNPANRLGSGPDGAEEIK Unmodified 1879.95 0.9500367 2531 Q15418 RPS6KA1 Ribosomal protein S6 kinase alpha-1 yes yes 0 0 2 By MS/MS 2 0 2 2 39.507 32.884 3;4 0.00012124 45772 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.977 57.933 22893000 22893000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44276 2531 39668 370409;370410 292347;292348;292349 292349 3 RNPDTQWITK Unmodified 1257.6466 0.64658446 1845 P61313 RPL15 60S ribosomal protein L15 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.998 36.178 2 0.031835 39181 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 74.841 44.277 142240000 0 0 0 4480600 5084300 8344600 6439300 8644900 9891200 12174000 13335000 18591000 17168000 17860000 20227000 44277 1845 39669 370411;370412;370413;370414;370415;370416;370417;370418;370419;370420;370421;370422 292350 292350 1 RNPNTQLSTSFDETYIK Unmodified 2012.9803 0.98033378 4804 Q9P242 NYAP2 Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter 2 yes yes 0 0 1 By MS/MS 2 0 1 1 73.442 65.246 3 0.0023648 86476 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 37.624 27.285 5670000 5670000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44278 4804 39670 370423 292351 292351 1 RNQDLAPNSAEQASILSLVTK Unmodified 2254.1917 0.19172353 2206 Q12905 ILF2 Interleukin enhancer-binding factor 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 84.256 83.489 3 2.4094E-72 106671 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 142.85 138.74 860930000 282720000 0 7732800 4401300 8799900 30403000 0 28417000 50803000 85357000 53037000 59464000 28820000 48342000 172640000 44279 2206 39671 370424;370425;370426;370427;370428;370429;370430;370431;370432;370433;370434;370435;370436 292352;292353;292354;292355;292356;292357;292358;292359;292360;292361;292362;292363;292364;292365;292366;292367;292368;292369 292357 18 RNQELLQSQLTEK Unmodified 1585.8424 0.84238373 430 O60763 USO1 General vesicular transport factor p115 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.06 2.58 2 15 1 1 2 2 1 2 1 1 1 1 1 2 1 43.516 42.937 2;3 7.0959E-12 46938 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 132.76 81.673 725090000 464380000 0 30679000 0 21102000 58155000 5620600 37333000 3670300 9344500 10436000 12475000 12072000 45354000 14470000 44280 430 39672 370437;370438;370439;370440;370441;370442;370443;370444;370445;370446;370447;370448;370449;370450;370451;370452;370453 292370;292371;292372;292373;292374;292375;292376;292377;292378;292379;292380;292381;292382;292383;292384;292385 292382 16 RNQNSQISTEK Unmodified 1303.648 0.64804102 455 O75116 ROCK2 Rho-associated protein kinase 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 7.0451 3.6206 2;3 6.9063E-06 6806 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 121.41 80.383 497660000 488900000 8763500 0 0 0 0 0 0 0 0 0 0 0 0 0 44281 455 39673 370454;370455;370456;370457 292386;292387;292388;292389 292387 3 RNQSFCPTVNLDK Unmodified 1577.762 0.76202492 1507 P46776 RPL27A 60S ribosomal protein L27a yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.04 2.6 3 22 2 1 1 2 2 1 2 2 2 2 2 2 2 2 49.52 48.883 2;3 9.6736E-13 54475 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 142.07 71.968 655550000 85063000 0 2371000 23282000 23169000 39573000 25097000 29681000 48907000 47759000 43343000 100840000 84628000 51151000 50687000 44282 1507 39674 370458;370459;370460;370461;370462;370463;370464;370465;370466;370467;370468;370469;370470;370471;370472;370473;370474;370475;370476;370477;370478;370479;370480;370481;370482 292390;292391;292392;292393;292394;292395;292396;292397;292398;292399;292400;292401;292402;292403;292404;292405 292402 15 RNREEEWDPEYTPK Unmodified 1847.8438 0.84384029 5122 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 39.86 40.39 3 0.015952 44165 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 53.754 43.095 41386000 0 0 0 0 0 0 0 0 0 0 0 11902000 8111000 4568500 16804000 44283 5122 39675 370483;370484;370485;370486 292406 292406 1 RNSCLATANAK Unmodified 1204.5983 0.59825406 2818 Q5VUA4 ZNF318 Zinc finger protein 318 yes yes 0 0 1 By MS/MS 2 0 1 1 11.717 7.8435 2 0.0082038 12341 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.355 51.102 7168300 7168300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44284 2818 39676 370487 292407 292407 1 RNSDSLPHR Unmodified 1080.5425 0.54245374 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 0 1 By MS/MS By matching By MS/MS 10 0 3 1 1 1 7.1881 7.3962 2 0.025062 5053 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 91.867 74.481 264120000 0 0 0 0 0 0 0 0 0 57154000 152840000 54122000 0 0 0 44285 4226 39677 370488;370489;370490 292408 292408 1 RNSFTPLSSSNTIR Unmodified 1578.8114 0.81141795 433 O60825 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 48.12 48.004 3 0.0024915 54110 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 28.956 17.038 39511000 0 0 0 4720000 7746700 9838000 7717700 4256100 5232600 0 0 0 0 0 0 44286 433 39678 370491;370492;370493;370494;370495;370496 292409;292410;292411;292412;292413;292414 292410 6 RNSNFSVQHPSSTSPTEK Unmodified 2001.9504 0.95043063 2097 Q03468 ERCC6 DNA excision repair protein ERCC-6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 23.94 24.102 3 1.9344E-06 24288 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.97 67.147 62668000 0 0 0 3718700 3889500 5699000 3848600 3937700 3567300 6991600 4797500 0 6545000 6987900 12685000 44287 2097 39679 370497;370498;370499;370500;370501;370502;370503;370504;370505;370506;370507 292415;292416;292417;292418;292419;292420;292421;292422;292423;292424;292425;292426 292419 11 RNSSDSAIDNPKPNK Unmodified 1641.8071 0.80706086 1498 P46100 ATRX Transcriptional regulator ATRX yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 9.4348 8.7862 3 0.0020892 13890 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.507 79.455 17999000 7653300 0 0 0 0 0 964010 0 0 0 0 3716700 2864700 0 2800100 44288 1498 39680 370508;370509;370510;370511;370512 292427;292428;292429 292428 3 RNSSLPDENNVAQLQEELK Unmodified 2183.0818 0.081838734 3778 Q96CN4 EVI5L EVI5-like protein yes yes 0 0 1 By MS/MS 2 0 1 1 75.623 72.86 3 8.4488E-05 88753 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 63.488 48.067 5974100 0 0 5974100 0 0 0 0 0 0 0 0 0 0 0 0 44289 3778 39681 370513 292430;292431 292430 2 RNSTIPTK Unmodified 915.51378 0.51377937 908 P0DMV9;P0DMV8 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 6.46 3.84 4 2 7 2 2 2 1 1 1 1 1 1 1 7.9909 6.7822 2 0.024125 5407 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 111.01 8.294 8580000000 7036900000 1059600000 412620000 3895200 0 1510800 51638000 0 2285100 0 0 3041400 2392900 6057000 0 44290 908 39682 370514;370515;370516;370517;370518;370519;370520;370521;370522;370523;370524;370525;370526 292432;292433;292434;292435;292436;292437 292432 1 RNSVDTATSSSLSTPSEPLSPTSSLGEERN Unmodified 3105.4698 0.46980847 989 P13807 GYS1 Glycogen [starch] synthase, muscle yes yes 0 0 2 By MS/MS 2 0 1 1 69.274 65.594 3 0.023217 81010 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 28.223 25.728 8632500 0 0 8632500 0 0 0 0 0 0 0 0 0 0 0 0 44291 989 39683 370527 292438 292438 1 RNTDVPESQQNFHRPVK Unmodified 2051.0297 0.029684005 3631 Q92576 PHF3 PHD finger protein 3 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 2 2 2 2 2 2 1 1 2 2 25.175 25.416 3;4 8.1832E-25 25908 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 85.619 70.85 247670000 0 0 0 0 8623000 29649000 20249000 18487000 29647000 17620000 18232000 22862000 20031000 17131000 45141000 44292 3631 39684 370528;370529;370530;370531;370532;370533;370534;370535;370536;370537;370538;370539;370540;370541;370542;370543;370544;370545;370546 292439;292440;292441;292442;292443;292444;292445;292446;292447;292448;292449;292450;292451;292452 292448 13 RNTEESSSPVRK Unmodified 1388.7008 0.70080487 2770 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes yes 0 0 2 By MS/MS 2 0 1 1 6.8247 3.3925 3 8.3294E-05 6440 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.412 76.448 43670000 43670000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44293 2770 39685 370547 292453;292454 292453 2 RNTELETLLAK Unmodified 1286.7194 0.71941505 273 O15344 MID1 E3 ubiquitin-protein ligase Midline-1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 73.37 66.041 2;3 0.0017821 84262 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.688 48.883 82794000 66035000 16759000 0 0 0 0 0 0 0 0 0 0 0 0 0 44294 273 39686 370548;370549;370550 292455;292456;292457 292455 3 RNTETEQRAPK Unmodified 1328.6797 0.6796755 5014 Q9UM54 MYO6 Unconventional myosin-VI yes yes 0 0 2 By MS/MS 2 0 1 1 6.0052 2.573 3 0.010939 5531 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.979 53.65 195800000 195800000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44295 5014 39687 370551 292458 292458 1 RNTIQFTHTQIEAIR Unmodified 1826.9751 0.97512924 393 O60306 AQR Intron-binding protein aquarius yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 56.432 56.936 3 0.00067717 64293 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.899 38.264 15360000 0 0 0 0 0 0 0 0 0 0 5999800 0 0 0 9360300 44296 393 39688 370552;370553 292459 292459 1 RNTLYFSTDV Unmodified 1214.5932 0.5931519 2219 Q12979 ABR Active breakpoint cluster region-related protein yes yes 0 0 1 By MS/MS 2 0 1 1 76.646 68.516 2 0.036371 90229 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.731 72.919 41240000 41240000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44297 2219 39689 370554 292460 292460 1 RNTNSVPETAPAAIPETK Unmodified 1894.9749 0.97485447 1766 P55265 ADAR Double-stranded RNA-specific adenosine deaminase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46.387 45.267 3 0.00012455 61465 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.152 55.667 134910000 15277000 17767000 11258000 4878300 5724500 6086700 0 8267800 5918500 6921200 12752000 8601800 10357000 10142000 10959000 44298 1766 39690 370555;370556;370557;370558;370559;370560;370561;370562;370563;370564;370565;370566;370567;370568 292461;292462;292463;292464;292465;292466;292467;292468;292469;292470;292471;292472;292473 292466 13 RNTTIPTK Unmodified 929.52943 0.52942943 934;1743 P11142;P54652 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.43 2.06 1 13 1 1 1 1 1 1 1 1 2 1 1 1 1 9.4859 9.468 2 0.0055626 8438 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 133.12 80.433 3101500000 0 0 709190000 143420000 106090000 147050000 187320000 132930000 99920000 97717000 436790000 326930000 160310000 207600000 346250000 44299 934;1743 39691 370569;370570;370571;370572;370573;370574;370575;370576;370577;370578;370579;370580;370581;370582 292474;292475;292476;292477;292478;292479;292480;292481;292482;292483;292484 292474 4 RNVEGQDMLYQSLK Unmodified 1679.8301 0.83010449 2178;1937 P63010;Q10567 AP2B1;AP1B1 AP-2 complex subunit beta;AP-1 complex subunit beta-1 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.12 3.41 5 1 2 2 3 1 1 1 63.756 59.238 2;3 1.2734E-09 79725 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.74 107.74 295230000 133120000 87727000 45017000 0 0 0 0 0 0 0 0 0 0 10276000 19089000 44300 1937;2178 39692 370583;370584;370585;370586;370587;370588;370589;370590 292485;292486;292487;292488;292489;292490;292491;292492;292493;292494;292495 292491 10 RNVEGQDMLYQSLK Oxidation (M) 1695.825 0.82501911 2178;1937 P63010;Q10567 AP2B1;AP1B1 AP-2 complex subunit beta;AP-1 complex subunit beta-1 no no 0 1 1 By matching By MS/MS By MS/MS By MS/MS 4.5 3.2 1 2 1 1 1 1 1 49.662 46.166 3 0.00015907 57854 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 93.823 75.906 58790000 206580 2985900 47121000 0 0 0 0 0 0 0 0 0 0 8476800 0 44301 1937;2178 39692 370591;370592;370593;370594 292496;292497;292498 292497 3116 0 RNVENFLEACR Unmodified 1406.6725 0.67248163 3877 Q96II8 LRCH3 Leucine-rich repeat and calponin homology domain-containing protein 3 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 12.454 12.59 3 0.027681 11224 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 24.343 12.477 95837000 0 0 0 25166000 15428000 0 0 23902000 0 0 551630 30788000 0 0 0 44302 3877 39693 370595;370596;370597;370598;370599 292499 292499 1 RNVIEAVYSR Unmodified 1205.6517 0.65166983 532 O75688 PPM1B Protein phosphatase 1B yes yes 0 0 1 By matching By matching By MS/MS 10 0 3 1 1 1 46.265 46.644 3 0.035283 51239 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 23.514 6.0784 9278400 0 0 0 0 0 0 0 0 860920 0 0 0 0 1586300 6831200 44303 532 39694 370600;370601;370602 292500 292500 1 RNVIFQPVAELK Unmodified 1412.814 0.81398414 2064 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.68 1.57 1 24 1 2 2 2 2 2 2 2 2 2 2 2 2 71.172 70.918 2;3 2.5718E-09 80673 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 148.56 109.25 1349700000 93732000 0 0 36512000 32781000 130600000 53892000 99350000 89317000 109360000 99073000 152240000 96381000 110100000 246370000 44304 2064 39695 370603;370604;370605;370606;370607;370608;370609;370610;370611;370612;370613;370614;370615;370616;370617;370618;370619;370620;370621;370622;370623;370624;370625;370626;370627 292501;292502;292503;292504;292505;292506;292507;292508;292509;292510;292511;292512;292513;292514;292515;292516;292517;292518;292519;292520;292521;292522;292523;292524;292525;292526;292527;292528;292529;292530;292531;292532 292522 20 RNVMILTNPVAAK Unmodified 1425.8126 0.81260393 4880 Q9UGI8 TES Testin yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 60.708 60.988 3 0.00021734 68575 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.32 49.721 38466000 0 0 0 0 0 2082700 0 0 1500200 3172700 4558400 6426400 0 3978100 16748000 44305 4880 39696 370628;370629;370630;370631;370632;370633;370634 292533;292534;292535;292536;292537 292534 5 RNVPQEESLEDSDVDADFK Unmodified 2191.9869 0.9869353 163 O00505 KPNA3 Importin subunit alpha-4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.18 3.74 3 1 7 1 2 1 1 1 1 1 1 1 1 60.58 58.645 3 1.172E-17 77095 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 108.14 90.084 165130000 47444000 29596000 24237000 0 4353800 7116800 0 0 0 0 12318000 7250100 3908500 9101200 19805000 44306 163 39697 370635;370636;370637;370638;370639;370640;370641;370642;370643;370644;370645 292538;292539;292540;292541;292542;292543;292544;292545;292546;292547;292548;292549 292544 12 RNVTVQPDDPISFMQLTAK Oxidation (M) 2175.0994 0.099403054 1720 P53618 COPB1 Coatomer subunit beta yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 77.079 75.947 3 6.6923E-18 96930 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 108.45 105.96 198400000 46988000 0 5461900 5695000 0 26932000 0 13987000 0 0 24465000 26678000 0 17059000 31135000 44307 1720 39698 370646;370647;370648;370649;370650;370651;370652;370653;370654;370655 292550;292551;292552;292553;292554;292555;292556;292557;292558;292559;292560;292561 292554 2792 12 RNVTVQPDDPISFMQLTAK Unmodified 2159.1045 0.10448843 1720 P53618 COPB1 Coatomer subunit beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.54 3.69 4 9 2 1 1 1 1 1 1 1 1 1 1 1 85.976 84.255 2;3 7.5991E-65 107407 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 114.55 111.32 270240000 133090000 19431000 1734800 0 0 11353000 0 6598200 6333200 13297000 9944800 11471000 3591800 7592400 45797000 44308 1720 39698 370656;370657;370658;370659;370660;370661;370662;370663;370664;370665;370666;370667;370668 292562;292563;292564;292565;292566;292567;292568;292569;292570;292571;292572;292573;292574;292575 292569 14 RNVYDLTSIPVR Unmodified 1431.7834 0.78341229 5037 Q9UNN5 FAF1 FAS-associated factor 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.414 69.489 3 0.00041794 79812 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 69.03 59.497 156240000 0 0 0 4783300 3590900 19227000 7366200 8017500 8687100 15130000 15870000 17991000 10772000 15563000 29245000 44309 5037 39699 370669;370670;370671;370672;370673;370674;370675;370676;370677;370678;370679;370680 292576;292577;292578;292579;292580;292581;292582;292583;292584;292585;292586;292587 292576 11 RPAAAAAAGSASPR Unmodified 1252.6636 0.6636315 3983 Q96S55 WRNIP1 ATPase WRNIP1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 10.985 11.124 3 0.00013484 7649 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 61.167 41.925 68877000 0 0 0 3222800 2775400 6412300 4055100 4796500 3112600 7918600 5468000 9418200 7030400 6588000 8078700 44310 3983 39700 370681;370682;370683;370684;370685;370686;370687;370688;370689;370690;370691;370692 292588;292589;292590;292591;292592;292593;292594;292595;292596;292597;292598 292593 8 RPAEDDVPRK Unmodified 1181.6153 0.61528433 3811 Q96EI5 TCEAL4 Transcription elongation factor A protein-like 4 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8.3234 7.8694 3 0.0097913 12419 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.827 73.913 559200000 197050000 6712200 0 16169000 16227000 13422000 15703000 568240 18501000 32687000 116660000 0 34470000 38381000 52644000 44311 3811 39701 370693;370694;370695;370696;370697;370698;370699;370700;370701;370702;370703;370704;370705;370706 292599;292600;292601;292602;292603;292604;292605 292600 2 RPAEDMEEEQAFK Oxidation (M) 1594.6933 0.69333623 1868 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.05 3.81 18 3 35 4 6 11 3 2 3 3 3 3 3 3 3 3 3 3 26.667 25.524 2;3 1.1604E-13 26110 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 136.38 120.58 3554500000 450020000 459100000 941950000 114740000 35918000 167720000 133900000 77585000 89774000 206370000 148660000 170460000 142430000 147480000 268370000 44312 1868 39702 370707;370708;370709;370710;370711;370712;370713;370714;370715;370716;370717;370718;370719;370720;370721;370722;370723;370724;370725;370726;370727;370728;370729;370730;370731;370732;370733;370734;370735;370736;370737;370738;370739;370740;370741;370742;370743;370744;370745;370746;370747;370748;370749;370750;370751;370752;370753;370754;370755;370756;370757;370758;370759;370760;370761;370762 292606;292607;292608;292609;292610;292611;292612;292613;292614;292615;292616;292617;292618;292619;292620;292621;292622;292623;292624;292625;292626;292627;292628;292629;292630;292631;292632;292633;292634;292635;292636;292637;292638;292639;292640;292641;292642;292643;292644;292645;292646;292647;292648;292649;292650 292645 3023 37 RPAEDMEEEQAFK Unmodified 1578.6984 0.69842161 1868 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.57 3.6 8 3 24 4 4 3 2 2 2 2 2 2 2 2 2 2 2 2 37.082 35.809 2;3 1.1753E-32 44876 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 158.3 120.58 5350300000 459060000 634690000 1148500000 118480000 93064000 312590000 152390000 173790000 123960000 285510000 413550000 314310000 209080000 278940000 632420000 44313 1868 39702 370763;370764;370765;370766;370767;370768;370769;370770;370771;370772;370773;370774;370775;370776;370777;370778;370779;370780;370781;370782;370783;370784;370785;370786;370787;370788;370789;370790;370791;370792;370793;370794;370795;370796;370797 292651;292652;292653;292654;292655;292656;292657;292658;292659;292660;292661;292662;292663;292664;292665;292666;292667;292668;292669;292670;292671;292672;292673;292674;292675;292676;292677;292678;292679;292680;292681;292682;292683;292684;292685 292672 33 RPAEDMEEEQAFKR Oxidation (M) 1750.7944 0.79444726 1868 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes yes 0 1 2 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 17 1 2 1 2 1 2 2 2 2 1 1 22.705 22.861 3 0.0026074 23190 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.918 51.169 178180000 0 0 0 7461000 9105700 9765600 14146000 3805000 11727000 29291000 25737000 0 35627000 13789000 17723000 44314 1868 39703 370798;370799;370800;370801;370802;370803;370804;370805;370806;370807;370808;370809;370810;370811;370812;370813;370814 292686;292687;292688;292689;292690;292691;292692 292690 3023 2 RPAEDMEEEQAFKR Unmodified 1734.7995 0.79953264 1868 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes yes 0 0 2 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 31.907 32.11 3 0.0014057 33807 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.879 62.804 141470000 0 0 0 7426300 6535600 11532000 0 0 7714300 18688000 20078000 27771000 11446000 8929000 21352000 44315 1868 39703 370815;370816;370817;370818;370819;370820;370821;370822;370823;370824 292693;292694;292695;292696;292697;292698 292694 4 RPAEDTDRETVAGIPNK Unmodified 1867.9388 0.93880331 2852 Q68CP9 ARID2 AT-rich interactive domain-containing protein 2 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 31.133 30.412 3;4 0.0010532 38868 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 69.485 43.05 276920000 16504000 0 29052000 11855000 10685000 15707000 14733000 13486000 15065000 20506000 19861000 27340000 21619000 26603000 33900000 44316 2852 39704 370825;370826;370827;370828;370829;370830;370831;370832;370833;370834;370835;370836;370837;370838;370839 292699;292700;292701;292702;292703;292704;292705;292706;292707 292703 7 RPAGGRPSPSAMGK Unmodified 1367.7092 0.70920149 3640 Q92615 LARP4B La-related protein 4B yes yes 0 0 2 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 10.704 10.894 3 0.021103 9799 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 43.03 6.0486 15058000 0 0 0 0 0 0 0 3854500 0 3000800 0 0 5297200 2905900 0 44317 3640 39705 370840;370841;370842;370843 292708 292708 0 RPALFSSSAK Unmodified 1062.5822 0.58219329 5244 Q9Y5Q8 GTF3C5 General transcription factor 3C polypeptide 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 27.403 27.691 2 0.012024 29867 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 90.906 49.253 150090000 0 0 0 8412700 0 23692000 0 10808000 0 15612000 19062000 22346000 13247000 4929700 31980000 44318 5244 39706 370844;370845;370846;370847;370848;370849;370850;370851;370852 292709 292709 1 RPAMLDNEADGNK Oxidation (M) 1445.6569 0.65689115 3702 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 0 1 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 2 16 1 1 1 2 1 2 1 1 1 2 2 2 1 11.631 11.43 3 0.00040306 9656 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 62.287 54.677 220500000 51627000 0 26806000 0 6898000 17523000 8002000 11526000 7449400 9316500 6897300 30428000 17078000 16706000 10247000 44319 3702 39707 370853;370854;370855;370856;370857;370858;370859;370860;370861;370862;370863;370864;370865;370866;370867;370868;370869;370870 292710;292711;292712;292713;292714;292715;292716;292717;292718 292718 5280 8 RPAMLDNEADGNK Unmodified 1429.662 0.66197652 3702 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.52 3.11 5 22 3 2 1 2 2 2 1 2 2 2 2 2 2 2 22.568 21.922 2;3 8.3467E-27 32387 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 141.58 131.23 650630000 301630000 0 18237000 13283000 13363000 32205000 21578000 16674000 18489000 27818000 36505000 39796000 32831000 32737000 45486000 44320 3702 39707 370871;370872;370873;370874;370875;370876;370877;370878;370879;370880;370881;370882;370883;370884;370885;370886;370887;370888;370889;370890;370891;370892;370893;370894;370895;370896;370897 292719;292720;292721;292722;292723;292724;292725;292726;292727;292728;292729;292730;292731;292732;292733;292734;292735;292736;292737;292738 292726 19 RPANSGELDK Unmodified 1085.5465 0.54653606 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6.7708 6.2623 2 2.429E-05 6698 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 128.91 70.301 140080000 45664000 7015000 27690000 3507600 5560600 5240300 6133500 6442400 6432800 4143500 4682800 5511200 4167700 3586600 4301900 44321 4139 39708 370898;370899;370900;370901;370902;370903;370904;370905;370906;370907;370908;370909;370910;370911;370912 292739;292740;292741;292742;292743;292744;292745;292746;292747;292748;292749;292750;292751 292746 13 RPAPQQIQQVQQQAVQNR Unmodified 2116.125 0.12498137 3856 Q96GM5 SMARCD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 42.805 42.977 3 1.1264E-97 46963 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 144.29 135.35 100550000 0 0 0 0 4930200 17211000 10394000 5956200 7336500 11308000 13470000 0 0 7475800 22467000 44322 3856 39709 370913;370914;370915;370916;370917;370918;370919;370920;370921;370922 292752;292753;292754;292755;292756;292757;292758;292759;292760;292761;292762;292763;292764;292765 292756 14 RPAPSGGASGDLR Unmodified 1239.632 0.63199703 1531 P47974 ZFP36L2 Zinc finger protein 36, C3H1 type-like 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.538 13.696 3 0.0004653 12321 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.257 45.821 175770000 0 0 0 8411200 10950000 11669000 11781000 9622000 7511800 20263000 16876000 19264000 22887000 17424000 19113000 44323 1531 39710 370923;370924;370925;370926;370927;370928;370929;370930;370931;370932;370933;370934 292766;292767;292768;292769;292770;292771;292772;292773;292774;292775 292769 6 RPAQPHRPSPASSLQR Unmodified 1783.9554 0.95539685 2795 Q5TCZ1 SH3PXD2A SH3 and PX domain-containing protein 2A yes yes 0 0 2 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 19.672 19.819 4 0.0062908 19829 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 40.187 32.676 67548000 0 0 0 0 7040600 9283500 7258000 7574500 7100400 7958800 7673900 0 8532800 5125300 0 44324 2795 39711 370935;370936;370937;370938;370939;370940;370941;370942;370943 292776 292776 1 RPASMAVMEGDLVK Unmodified 1502.7585 0.75851945 2861 Q68EM7 ARHGAP17 Rho GTPase-activating protein 17 yes yes 0 0 1 By MS/MS 2 0 2 2 72.651 64.413 2;3 0.0012138 85579 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.41 37.521 71057000 71057000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44325 2861 39712 370944;370945 292777;292778;292779 292778 3 RPASVSSSAAVEHEQR Unmodified 1709.8445 0.844509 3108 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.62 1.7 1 20 1 1 1 2 1 2 1 2 2 2 2 2 2 14.908 14.883 3;4 9.1607E-32 13756 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 147.17 129.68 676670000 6022800 0 0 26693000 22174000 34049000 26167000 40938000 21617000 64286000 83172000 69223000 69212000 62010000 151100000 44326 3108 39713 370946;370947;370948;370949;370950;370951;370952;370953;370954;370955;370956;370957;370958;370959;370960;370961;370962;370963;370964;370965;370966 292780;292781;292782;292783;292784;292785;292786;292787;292788;292789;292790;292791;292792;292793;292794;292795;292796;292797 292786 17 RPASVSSSAAVEHEQREAAAK Unmodified 2180.0934 0.093406473 3108 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 2 24 2 2 2 2 2 2 2 2 2 2 2 2 2 20.305 20.086 3;4 1.4077E-86 29835 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 129.02 107.98 678330000 185620000 0 0 22193000 19975000 23052000 42670000 29470000 36914000 44129000 55868000 45289000 51458000 35139000 86557000 44327 3108 39714 370967;370968;370969;370970;370971;370972;370973;370974;370975;370976;370977;370978;370979;370980;370981;370982;370983;370984;370985;370986;370987;370988;370989;370990;370991;370992 292798;292799;292800;292801;292802;292803;292804;292805;292806;292807;292808;292809;292810;292811;292812;292813;292814;292815;292816;292817;292818;292819;292820;292821 292809 20 RPATADSPKPSAK Unmodified 1324.7099 0.709913 2089 Q03111 MLLT1 Protein ENL yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.2222 6.3428 3 5.5956E-07 4050 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 80.746 64.369 97110000 0 0 0 6303100 6939600 4586700 9295200 5025600 6348100 7548400 13184000 12680000 8247400 6896300 10056000 44328 2089 39715 370993;370994;370995;370996;370997;370998;370999;371000;371001;371002;371003;371004 292822;292823;292824;292825;292826;292827;292828;292829 292824 7 RPAVASARPSILPSK Unmodified 1548.91 0.91000979 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 2 1 1 1 41.144 41.37 3;4 0.018424 46374 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 35.303 23.689 270300000 0 0 0 12808000 6166900 22180000 14790000 0 13953000 15427000 17975000 72880000 17374000 12268000 64475000 44329 1226 39716 371005;371006;371007;371008;371009;371010;371011;371012;371013;371014;371015;371016 292830;292831 292830 0 RPCFSALTPDETYVPK Unmodified 1879.9138 0.91383411 65 CON__P02769 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.707 70.779 3 0.00084482 81204 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 36.193 31.576 + 146830000 0 0 0 8062500 12690000 7578500 4006800 6113200 12822000 21017000 24048000 18003000 8464200 8481400 15544000 44330 65 39717 371017;371018;371019;371020;371021;371022;371023;371024;371025;371026;371027;371028 292832;292833;292834;292835;292836;292837;292838;292839;292840;292841;292842;292843;292844;292845 292838 14 RPDDVPLSLSPSK Unmodified 1409.7514 0.75144346 4876 Q9UFC0 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching 7.7 3.52 2 1 7 2 1 1 1 1 1 1 1 1 54.185 53.355 3 0.0037741 70966 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.32 37.858 84771000 0 5849900 17933000 6062500 0 2965300 10861000 11937000 0 17339000 0 5553100 0 0 6270000 44331 4876 39718 371029;371030;371031;371032;371033;371034;371035;371036;371037;371038 292846;292847;292848;292849;292850 292847 4 RPDEEPMEEEPPL Oxidation (M) 1582.6821 0.68210284 1784 P56524 HDAC4 Histone deacetylase 4 yes yes 0 1 1 By MS/MS 2.5 0.5 1 1 2 52.417 47.073 2 0.019731 60943 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.726 53.956 22988000 0 22988000 0 0 0 0 0 0 0 0 0 0 0 0 0 44332 1784 39719 371039;371040 292851 292851 2909 1 RPDEEPMEEEPPL Unmodified 1566.6872 0.68718822 1784 P56524 HDAC4 Histone deacetylase 4 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 65.04 59.708 2 0.013914 73268 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 71.016 66.999 26963000 0 26963000 0 0 0 0 0 0 0 0 0 0 0 0 0 44333 1784 39719 371041;371042 292852 292852 1 RPDFAQQQAMQQLTFDGK Oxidation (M) 2124.0058 0.0058370195 4293 Q9C0J8 WDR33 pre-mRNA 3' end processing protein WDR33 yes yes 0 1 1 By MS/MS 2 0 1 1 66.399 58.104 3 0.00075077 78010 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.222 37.851 7134700 7134700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44334 4293 39720 371043 292853 292853 5760 1 RPDQQLQGEGK Unmodified 1254.6317 0.63166267 3405 Q8NC51 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 1 2 2 2 2 10.158 10.286 2;3 7.7987E-15 8587 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 163.12 137.01 822380000 0 0 0 49418000 47012000 53977000 48694000 35327000 31224000 56275000 65273000 130900000 92388000 87635000 124260000 44335 3405 39721 371044;371045;371046;371047;371048;371049;371050;371051;371052;371053;371054;371055;371056;371057;371058;371059;371060;371061;371062;371063;371064;371065;371066 292854;292855;292856;292857;292858;292859;292860;292861;292862;292863;292864;292865;292866;292867;292868;292869;292870;292871;292872;292873;292874;292875 292871 15 RPDSTWHSAEVIQSR Unmodified 1767.8652 0.86524444 4440 Q9H7Z6 KAT8 Histone acetyltransferase KAT8 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 39.553 39.895 3 0.00041392 43517 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 56.339 51.13 66148000 0 0 0 0 0 4892500 0 5614400 4380600 5685900 8656200 10916000 6572000 5788900 13641000 44336 4440 39722 371067;371068;371069;371070;371071;371072;371073;371074;371075 292876;292877;292878;292879;292880;292881;292882;292883 292883 8 RPDVTYVYDVAK Unmodified 1424.73 0.72997974 3508 Q8TDX7 NEK7 Serine/threonine-protein kinase Nek7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 58.742 57.003 2;3 0.0014237 76895 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.423 53.577 221120000 63694000 24819000 20867000 3811000 5089400 10968000 7693500 7387800 5302400 11390000 10310000 11618000 7666400 7994900 22507000 44337 3508 39723 371076;371077;371078;371079;371080;371081;371082;371083;371084;371085;371086;371087;371088;371089;371090;371091;371092 292884;292885;292886;292887;292888;292889;292890;292891;292892;292893;292894;292895 292889 10 RPDVVENQPDAASQLNVDASGNLAK Unmodified 2607.2889 0.2888714 4772 Q9NZL9 MAT2B Methionine adenosyltransferase 2 subunit beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 62.499 62.814 3 2.2107E-75 70965 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 118.9 111.37 65564000 0 0 0 0 0 5171000 0 0 0 0 16220000 9704900 0 8332900 26135000 44338 4772 39724 371093;371094;371095;371096;371097 292896;292897;292898;292899;292900 292897 5 RPEESVQETLAAAVPK Unmodified 1723.9105 0.9104633 1469 P42858 HTT Huntingtin yes yes 0 0 1 By MS/MS 2 0 1 1 73.979 71.027 3 0.01178 86570 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 25.558 13.392 10395000 0 0 10395000 0 0 0 0 0 0 0 0 0 0 0 0 44339 1469 39725 371098 292901 292901 1 RPEGACGDGQSSRVSPPAADVLK Unmodified 2353.1445 0.14445577 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 0 2 By MS/MS 2 0 2 2 54.37 46.285 3;4 0.0020344 63482 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.49 46.269 45202000 45202000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44340 645 39726 371099;371100 292902;292903 292903 2 RPEGPGAQAPSSPR Unmodified 1405.7062 0.7062246 1409 P40222 TXLNA Alpha-taxilin yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 16.553 16.827 3 0.0064155 16410 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 27.208 13.244 23842000 0 0 0 0 0 2658900 2976100 0 0 1622000 2884000 5059700 0 3528200 5113000 44341 1409 39727 371101;371102;371103;371104;371105;371106;371107 292904;292905;292906 292906 3 RPEGRTYADYESVNECMEGVCK Oxidation (M) 2665.1207 0.12068514 2013 P84090 ERH Enhancer of rudimentary homolog yes yes 0 1 2 By MS/MS 2 0 1 1 47.937 40.223 4 1.4337E-15 55691 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.718 93.795 37986000 37986000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44342 2013 39728 371108 292907;292908 292908 3268 2 RPEGRTYADYESVNECMEGVCK Unmodified 2649.1258 0.12577051 2013 P84090 ERH Enhancer of rudimentary homolog yes yes 0 0 2 By MS/MS 2 0 2 2 62.337 54.082 3;4 1.1017E-48 73100 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 128.01 123.91 64960000 64960000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44343 2013 39728 371109;371110 292909;292910;292911 292910 2 RPELEDSTLR Unmodified 1214.6255 0.62551466 2501 Q15149 PLEC Plectin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.319 31.504 2 0.020653 33930 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 82.749 48.953 117780000 0 0 0 8888700 7802000 7984900 7910000 9619000 5888700 8763500 11974000 16442000 11678000 8577100 12251000 44344 2501 39729 371111;371112;371113;371114;371115;371116;371117;371118;371119;371120;371121;371122 292912;292913;292914 292912 3 RPELLTHSTTEVTQPR Unmodified 1863.9803 0.9802742 1977 P78347 GTF2I General transcription factor II-I yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 40.845 41.023 3;4 8.3586E-46 45919 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 151.48 141.7 3564000000 0 0 0 148860000 93555000 365990000 163550000 200800000 235180000 335090000 231090000 534140000 374210000 236340000 645160000 44345 1977 39730 371123;371124;371125;371126;371127;371128;371129;371130;371131;371132;371133;371134;371135;371136;371137;371138;371139;371140;371141;371142;371143;371144;371145;371146 292915;292916;292917;292918;292919;292920;292921;292922;292923;292924;292925;292926;292927;292928;292929;292930;292931;292932;292933;292934;292935;292936;292937;292938;292939;292940;292941;292942;292943;292944 292931 26 RPELLTNEDLQGRK Unmodified 1667.8955 0.89548193 4670 Q9NVM4 PRMT7 Protein arginine N-methyltransferase 7 yes yes 0 0 2 By MS/MS 2 0 1 1 51.157 43.196 3 0.024959 59727 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.885 43.087 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44346 4670 39731 371147 292945 292945 1 RPENPKPQDGK Unmodified 1264.6524 0.65239812 1955 P67809 YBX1 Nuclease-sensitive element-binding protein 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 5.5687 5.6861 3 7.4842E-10 3395 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 147.62 126.79 353990000 0 0 0 21217000 31545000 22216000 31993000 31998000 19725000 26419000 26388000 46615000 40676000 29060000 26135000 44347 1955 39732 371148;371149;371150;371151;371152;371153;371154;371155;371156;371157;371158;371159 292946;292947;292948;292949;292950;292951;292952;292953;292954;292955;292956;292957;292958 292952 13 RPEPPSTSTLK Unmodified 1211.651 0.65100113 4622 Q9NS91 RAD18 E3 ubiquitin-protein ligase RAD18 yes yes 0 0 1 By MS/MS By matching 2 0 2 1 1 29.698 25.286 2 0.002913 35555 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 124.67 88.273 45114000 42227000 0 2886600 0 0 0 0 0 0 0 0 0 0 0 0 44348 4622 39733 371160;371161 292959 292959 0 RPEPSTLENITDDK Unmodified 1613.7897 0.78967946 2063 Q01804 OTUD4 OTU domain-containing protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 46.844 46.622 3 1.1079E-08 52401 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 96.414 90.275 118600000 0 0 7925200 5229400 6952500 6622300 6421800 5769700 8269000 11234000 16141000 19538000 15523000 8969900 0 44349 2063 39734 371162;371163;371164;371165;371166;371167;371168;371169;371170;371171;371172;371173;371174 292960;292961;292962;292963;292964;292965;292966;292967;292968;292969;292970;292971;292972;292973;292974;292975;292976 292973 16 RPEQAVEAVLGK Unmodified 1295.7197 0.7197494 2517 Q15334 LLGL1 Lethal(2) giant larvae protein homolog 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 52.074 52.027 2 0.050559 57752 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 50.284 25.446 16848000 0 0 0 0 1930900 5792500 3529700 0 0 0 0 0 0 5594800 0 44350 2517 39735 371175;371176;371177;371178 292977 292977 1 RPETKPSSDLETSK Unmodified 1573.7948 0.79476484 4616 Q9NRY5 FAM114A2 Protein FAM114A2 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12.573 12.232 3 8.8794E-14 11415 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 125.97 115.22 165080000 45410000 0 5632200 7175300 6604100 5300800 10402000 13205000 3092500 12405000 5867900 13560000 11753000 7060200 17607000 44351 4616 39736 371179;371180;371181;371182;371183;371184;371185;371186;371187;371188;371189;371190;371191;371192 292978;292979;292980;292981;292982;292983;292984;292985;292986;292987;292988;292989;292990 292986 6 RPFRPPPAHFQPGK Unmodified 1630.8845 0.88446374 1801 P58012 FOXL2 Forkhead box protein L2 yes yes 0 0 2 By MS/MS By MS/MS 10 0 2 1 1 33.723 34.451 4 0.030071 37054 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 31.526 18.425 48872000 0 0 0 0 0 0 0 0 0 0 0 11240000 0 0 37632000 44352 1801 39737 371193;371194 292991;292992 292991 2 RPGAALDPGCVLAK Unmodified 1423.7606 0.76056836 2231 Q13085 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes yes 0 0 1 By MS/MS 2 0 2 2 65.339 57.05 2;3 0.0095807 76790 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.332 58.512 44620000 44620000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44353 2231 39738 371195;371196 292993;292994 292993 1 RPGEPNMQGIPK Unmodified 1322.6765 0.67650438 4982 Q9UL03 INTS6 Integrator complex subunit 6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 38.769 36.826 3 0.0061736 51242 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 41.684 27.748 67497000 50406000 0 0 0 0 0 0 0 0 0 0 0 0 6843100 10248000 44354 4982 39739 371197;371198;371199 292995;292996;292997 292996 3 RPGEWSGLEK Unmodified 1157.5829 0.58292157 5061 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 0 0 1 By MS/MS 2 0 1 1 43.221 36.428 3 0.044396 50241 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.897 23.907 49710000 49710000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44355 5061 39740 371200 292998 292998 0 RPGFSPTSHR Unmodified 1140.5788 0.57883924 3538 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 12.227 12.356 3 0.010669 11617 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 33.87 13.093 73585000 0 0 0 4890700 4489400 10575000 4719900 4143400 3011600 7724500 5145100 0 8585100 5505200 14795000 44356 3538 39741 371201;371202;371203;371204;371205;371206;371207;371208;371209;371210;371211 292999;293000;293001;293002;293003;293004 293000 6 RPGGMTSTYGR Oxidation (M) 1197.5561 0.55605489 136 O00267 SUPT5H Transcription elongation factor SPT5 yes yes 0 1 1 By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 7.4233 7.5691 3 0.0036349 4606 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 45.077 39.418 48006000 0 0 0 1743200 0 3781600 2359900 2425800 4670800 4593100 11895000 0 7241400 5148600 4146500 44357 136 39742 371212;371213;371214;371215;371216;371217;371218;371219;371220;371221 293005;293006 293005 185 2 RPGHDDGQRPSGGAAAAPR Unmodified 1871.9099 0.90990322 3363 Q8N726 CDKN2A Tumor suppressor ARF yes yes 0 0 2 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 7.6836 7.9165 4 0.000188 5229 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.145 51.884 47618000 0 0 0 0 0 0 0 0 1348900 3312100 14814000 8989700 9357200 3506800 6289100 44358 3363 39743 371222;371223;371224;371225;371226;371227;371228 293007;293008;293009;293010 293007 4 RPGPGTLYDVPR Unmodified 1326.7044 0.70443369 1788 P56945 BCAR1 Breast cancer anti-estrogen resistance protein 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 48.098 48.336 3 0.0036045 54651 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 34.685 24.797 103210000 0 0 0 0 5496300 8678300 7949800 0 5848100 13119000 7526500 11282000 11177000 12407000 19724000 44359 1788 39744 371229;371230;371231;371232;371233;371234;371235;371236;371237;371238;371239 293011;293012;293013;293014;293015;293016;293017;293018 293016 6 RPGQAPPDQEALQVVYER Unmodified 2052.0389 0.038851707 4949 Q9UJY4 GGA2 ADP-ribosylation factor-binding protein GGA2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.716 66.784 3 0.00045422 76504 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 47.726 39.336 125980000 0 0 0 6664500 6584000 10585000 9930500 10350000 10474000 15923000 11345000 18996000 0 0 25132000 44360 4949 39745 371240;371241;371242;371243;371244;371245;371246;371247;371248;371249;371250;371251 293019;293020;293021;293022;293023;293024;293025;293026;293027;293028;293029;293030;293031 293019 13 RPGQSFHVNSEVNSVLSPR Unmodified 2109.0715 0.071548819 2425 Q14671 PUM1 Pumilio homolog 1 yes yes 0 0 1 By MS/MS 10 0 2 2 60.889 61.469 3 6.5471E-05 69454 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.009 47.221 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44361 2425 39746 371252;371253 293032;293033 293033 2 RPGSLPAPPPSQLPR Unmodified 1568.8787 0.87870966 1406 P39880 CUX1 Homeobox protein cut-like 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 54.551 54.651 3 0.00093775 61664 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 45.864 34.758 245710000 0 0 0 13473000 12634000 14547000 20178000 16182000 15176000 0 0 45027000 26410000 31270000 50808000 44362 1406 39747 371254;371255;371256;371257;371258;371259;371260;371261;371262;371263 293034;293035;293036;293037;293038;293039;293040;293041;293042;293043;293044;293045;293046;293047 293035 14 RPGSVSSTDQERELK Unmodified 1687.8489 0.84892567 4346 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 16.308 16.053 3 1.0041E-101 24693 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 215.48 186.15 102840000 38366000 0 0 0 1783500 4140700 3553600 0 4293900 5990300 6106100 11497000 7205400 7324400 12578000 44363 4346 39748 371264;371265;371266;371267;371268;371269;371270;371271;371272;371273;371274 293048;293049;293050;293051;293052;293053;293054;293055;293056 293053 9 RPGVPGAPLPGR Unmodified 1172.6778 0.67782501 4808 Q9P265 DIP2B Disco-interacting protein 2 homolog B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 40.75 41.09 3 0.0025061 45212 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 37.144 30.911 24431000 0 0 0 0 0 3734500 0 0 0 4155500 6279800 6358300 0 3902700 0 44364 4808 39749 371275;371276;371277;371278;371279 293057;293058;293059;293060;293061 293061 5 RPGVSEAASGSQEK Unmodified 1401.6848 0.68482046 5027 Q9UN79 SOX13 Transcription factor SOX-13 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 9.3398 9.0517 3 0.0013142 14067 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.212 51.999 49944000 23425000 0 0 0 2705500 2504900 2732800 1375700 1430300 2552000 0 0 4572700 1941000 6704700 44365 5027 39750 371280;371281;371282;371283;371284;371285;371286;371287;371288;371289 293062;293063;293064;293065;293066 293063 5 RPGVTGENSNEVAK Unmodified 1456.727 0.72701962 3084 Q7Z3K3 POGZ Pogo transposable element with ZNF domain yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 4 8 2 2 1 1 1 1 1 1 1 1 14.642 13.69 2;3 7.2064E-06 13278 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 87.447 70.226 203150000 63542000 0 10751000 0 0 11820000 0 9731300 10484000 18163000 13907000 19506000 19333000 0 25914000 44366 3084 39751 371290;371291;371292;371293;371294;371295;371296;371297;371298;371299;371300;371301 293067;293068;293069;293070;293071;293072;293073;293074;293075;293076;293077 293076 9 RPGYGAYDAFK Unmodified 1243.5986 0.59857163 804 P05198 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.68 1.57 1 24 1 2 2 2 2 2 2 2 2 2 2 2 2 42.693 42.544 2;3 0.0013882 46163 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.354 40.921 594310000 147750000 0 0 19907000 14863000 40861000 21128000 22258000 21653000 35206000 41456000 59048000 29486000 43584000 97115000 44367 804 39752 371302;371303;371304;371305;371306;371307;371308;371309;371310;371311;371312;371313;371314;371315;371316;371317;371318;371319;371320;371321;371322;371323;371324;371325;371326 293078;293079;293080;293081;293082;293083;293084;293085;293086;293087;293088;293089;293090;293091;293092;293093;293094 293082 9 RPHIAQVPEPPPK Unmodified 1464.8201 0.82013215 5298 Q9Y6X8 ZHX2 Zinc fingers and homeoboxes protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 35.083 35.113 3 6.6665E-08 38455 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 80.469 64.713 65575000 0 0 0 4950200 2580100 0 8137800 5322900 9117900 8605600 0 0 17328000 9532900 0 44368 5298 39753 371327;371328;371329;371330;371331;371332;371333;371334 293095;293096;293097;293098;293099;293100;293101;293102 293100 8 RPHTLNSTSMSK Unmodified 1357.6772 0.67723266 202 O14686 KMT2D Histone-lysine N-methyltransferase 2D yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 10.968 11.071 3 0.00053426 9158 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 53.448 35.311 22435000 0 0 0 1055600 1101200 1684000 1278000 1874800 0 0 0 3618700 4063600 4187600 3571500 44369 202 39754 371335;371336;371337;371338;371339;371340;371341;371342;371343 293103;293104;293105;293106;293107;293108 293108 6 RPIIQFVESGDDK Unmodified 1502.7729 0.77290718 2370 Q14134 TRIM29 Tripartite motif-containing protein 29 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 2 61.642 61.841 3 0.00087182 71024 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 42.426 29.504 46560000 0 0 0 0 2256700 0 2439200 4329700 4425600 4597500 5126800 0 4424100 3890400 15070000 44370 2370 39755 371344;371345;371346;371347;371348;371349;371350;371351;371352;371353;371354 293109;293110;293111;293112;293113;293114;293115;293116 293114 8 RPISADSAIMNPASK Oxidation (M) 1572.793 0.7929907 2040 Q00610 CLTC Clathrin heavy chain 1 yes yes 0 1 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 14 2 1 1 2 2 1 2 2 1 34.82 34.959 2;3 0.00026083 38348 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 59.513 45.483 130170000 0 0 0 12548000 949500 19878000 12421000 9494200 0 17337000 27389000 26637000 0 3521400 0 44371 2040 39756 371355;371356;371357;371358;371359;371360;371361;371362;371363;371364;371365;371366;371367;371368 293117;293118;293119;293120;293121;293122;293123;293124 293119 3300 7 RPISADSAIMNPASK Unmodified 1556.7981 0.79807608 2040 Q00610 CLTC Clathrin heavy chain 1 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 2 1 1 1 1 1 1 44.551 44.739 3 0.00024746 50375 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 61.867 53.046 167190000 0 0 0 8043000 6411200 18862000 0 0 0 11214000 22412000 24576000 13724000 18014000 43938000 44372 2040 39756 371369;371370;371371;371372;371373;371374;371375;371376;371377;371378 293125;293126;293127;293128;293129;293130;293131;293132 293125 8 RPIVGLGGGK Unmodified 952.5818 0.58179936 2338 Q13643 FHL3 Four and a half LIM domains protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 27.662 27.905 2 0.045166 28551 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.625 24.178 88402000 0 0 0 0 6421900 6869100 5405600 0 4418700 7240200 9880100 15274000 7399300 8823000 16670000 44373 2338 39757 371379;371380;371381;371382;371383;371384;371385;371386;371387;371388 293133;293134;293135 293134 3 RPLAPQEPANR Unmodified 1247.6735 0.67346791 2765 Q5T0F9 CC2D1B Coiled-coil and C2 domain-containing protein 1B yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 18.831 19.22 3 0.015517 19712 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 28.806 16.23 25259000 0 0 0 0 0 0 0 2464700 0 3861400 4956400 3817500 4184900 0 5973700 44374 2765 39758 371389;371390;371391;371392;371393;371394 293136;293137 293136 2 RPLDDGVGNQLGALVHQR Unmodified 1944.029 0.028955723 3873 Q96I24 FUBP3 Far upstream element-binding protein 3 yes yes 0 0 1 By MS/MS 10 0 2 2 69.893 70.359 3;4 0.001017 80190 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.852 30.192 19789000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19789000 44375 3873 39759 371395;371396 293138;293139 293138 1 RPLDEQQK Unmodified 1012.5302 0.53015772 3545 Q8WUH2 TGFBRAP1 Transforming growth factor-beta receptor-associated protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 6.7537 3.8874 2 0.011941 5952 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 133.33 60.082 48802000 30588000 0 18214000 0 0 0 0 0 0 0 0 0 0 0 0 44376 3545 39760 371397;371398 293140 293140 0 RPLEDGDQPDAK Unmodified 1339.6368 0.63680763 3737 Q96AE4 FUBP1 Far upstream element-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.29 6 1 24 2 3 2 2 2 2 2 2 2 2 2 2 2 2 2 14.052 13.419 2;3 3.5171E-75 12561 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 214.82 168.36 2147100000 251980000 347560000 177500000 56958000 54431000 66002000 65934000 52802000 62178000 132880000 147080000 172060000 107590000 136490000 315670000 44377 3737 39761 371399;371400;371401;371402;371403;371404;371405;371406;371407;371408;371409;371410;371411;371412;371413;371414;371415;371416;371417;371418;371419;371420;371421;371422;371423;371424;371425;371426;371427;371428;371429 293141;293142;293143;293144;293145;293146;293147;293148;293149;293150;293151;293152;293153;293154;293155;293156;293157;293158;293159;293160;293161;293162;293163;293164;293165;293166;293167;293168;293169;293170 293154 26 RPLEDGDQPDAKK Unmodified 1467.7318 0.73177065 3737 Q96AE4 FUBP1 Far upstream element-binding protein 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 9.7381 9.3237 3 3.3152E-07 12040 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 100.19 76.511 134320000 14082000 0 22600000 10041000 8644800 0 12087000 5130400 2245700 4389000 0 25803000 8262900 8041800 12991000 44378 3737 39762 371430;371431;371432;371433;371434;371435;371436;371437;371438;371439;371440;371441 293171;293172;293173;293174;293175;293176;293177 293174 2 RPLEMEQQQAYRPEMK 2 Oxidation (M) 2064.9721 0.97209405 4162 Q9BUJ2 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes yes 0 2 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 24.57 24.847 3 0.0013761 26703 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.022 56.441 73786000 0 0 0 0 0 8764000 6152400 6266000 7381200 7641600 0 8150400 11454000 4962600 13013000 44379 4162 39763 371442;371443;371444;371445;371446;371447;371448;371449;371450 293178;293179;293180;293181;293182;293183;293184 293178 5652;5653 6 RPLEMEQQQAYRPEMK Oxidation (M) 2048.9772 0.97717943 4162 Q9BUJ2 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes yes 0 1 2 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 2 2 2 2 2 2 2 2 1 1 2 33.877 34.049 3 7.3583E-06 36924 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 81.656 62.585 150770000 0 0 0 7539300 10325000 17899000 9355800 0 8831900 16948000 18889000 22980000 6565700 5649700 25787000 44380 4162 39763 371451;371452;371453;371454;371455;371456;371457;371458;371459;371460;371461;371462;371463;371464;371465;371466;371467;371468;371469;371470 293185;293186;293187;293188;293189;293190;293191;293192;293193;293194;293195 293185 5652;5653 11 RPLEMEQQQAYRPEMK Unmodified 2032.9823 0.98226481 4162 Q9BUJ2 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes yes 0 0 2 By matching By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 42.705 43.04 3 0.010795 47532 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 51.76 36.522 40279000 0 0 0 0 0 0 0 7208400 0 3667000 0 0 0 5436800 23967000 44381 4162 39763 371471;371472;371473;371474 293196 293196 1 RPLEQQQPHHIPTSAPVYQQPQQQPVAQSYGGYK Unmodified 3884.9347 0.93466799 2452 Q14847 LASP1 LIM and SH3 domain protein 1 yes yes 0 0 1 By matching By MS/MS 10 0 3 1 2 57.881 58.412 4;5 5.1984E-33 65437 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.829 54.212 55355000 0 0 0 0 0 0 0 0 0 0 4097100 0 0 0 51258000 44382 2452 39764 371475;371476;371477 293197;293198 293197 2 RPLHSAQAVDVASASNFR Unmodified 1924.9868 0.98675656 4394 Q9H4A4 RNPEP Aminopeptidase B yes yes 0 0 1 By MS/MS 10 0 1 1 45.731 46.472 3 0.00049972 51138 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.248 16.563 20088000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20088000 44383 4394 39765 371478 293199;293200 293199 2 RPLIVFDGSSTSTSIK Unmodified 1706.9203 0.9202997 4185 Q9BVC5 C2orf49 Ashwin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 68.178 68.449 3 0.0018125 77740 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.525 41.175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44384 4185 39766 371479;371480;371481;371482;371483 293201;293202;293203;293204;293205 293202 5 RPLLAFACDDK Unmodified 1304.6547 0.6547063 3887 Q96J01 THOC3 THO complex subunit 3 yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.54 58.656 3 0.014992 65564 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.774 30.401 76771000 0 0 0 2965600 1970500 6553200 2644900 3533600 5182500 4008000 5332300 13084000 9408900 7104900 14982000 44385 3887 39767 371484;371485;371486;371487;371488;371489;371490;371491;371492;371493;371494;371495 293206;293207;293208;293209 293206 4 RPLPFAPRPAVEASTGGEATQETGK Unmodified 2566.314 0.31396394 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 2 By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 2 57.136 57.451 3;4 2.7021E-41 64267 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 102.67 95.643 106710000 0 0 0 0 0 11457000 0 6090200 12555000 8196300 0 20784000 0 19710000 27915000 44386 4285 39768 371496;371497;371498;371499;371500;371501;371502;371503 293210;293211;293212;293213;293214;293215;293216 293211 7 RPLPTQQQPQPSQK Unmodified 1631.8744 0.87435256 4797 Q9P0U4 CXXC1 CXXC-type zinc finger protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 2 2 1 1 2 2 2 2 19.689 20.004 2;3 5.5454E-09 19416 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 97.273 73.441 136060000 0 0 0 0 0 0 19331000 22519000 0 1964300 3260800 39716000 28181000 17989000 3101500 44387 4797 39769 371504;371505;371506;371507;371508;371509;371510;371511;371512;371513;371514;371515;371516;371517 293217;293218;293219;293220;293221;293222 293220 5 RPLPVESPDTQR Unmodified 1393.7314 0.73137672 1795 P57682 KLF3 Krueppel-like factor 3 yes yes 0 0 1 By matching By MS/MS By matching 10 0 3 1 1 1 31.715 32.303 3 0.026463 35488 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 29.215 20.486 11472000 0 0 0 0 0 0 0 0 0 0 0 4577000 2997400 0 3897400 44388 1795 39770 371518;371519;371520 293223 293223 1 RPLPVESPDTQRK Unmodified 1521.8263 0.82633974 1795 P57682 KLF3 Krueppel-like factor 3 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.998 25.201 3 0.0075392 25825 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 53.377 47.172 194320000 0 0 0 12160000 10498000 11148000 18703000 15749000 12585000 19520000 18904000 13411000 16585000 14714000 30342000 44389 1795 39771 371521;371522;371523;371524;371525;371526;371527;371528;371529;371530;371531;371532 293224;293225;293226;293227;293228;293229;293230;293231 293231 6 RPLRPQVVTDDDGQAPEAK Unmodified 2091.0709 0.070880117 4531 Q9HDC9 APMAP Adipocyte plasma membrane-associated protein yes yes 0 0 2 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 34.532 34.857 3 0.018671 38797 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 40.515 31.572 59052000 0 0 0 3652800 0 0 0 5665700 0 0 7383100 13014000 13110000 6535600 9690800 44390 4531 39772 371533;371534;371535;371536;371537;371538;371539 293232;293233 293232 2 RPLSECQEGK Unmodified 1202.5714 0.5713706 4332 Q9H0K6 PUS7L Pseudouridylate synthase 7 homolog-like protein yes yes 0 0 1 By MS/MS 2 0 1 1 10.103 6.3284 2 0.043034 10381 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.243 24.284 9570900 9570900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44391 4332 39773 371540 293234 293234 1 RPLSGPDVGTPQPAGLASGAK Unmodified 1975.0487 0.048688112 714 O96013 PAK4 Serine/threonine-protein kinase PAK 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 55.715 55.2 3 5.569E-09 74542 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.675 70.063 253050000 73980000 0 0 10389000 15707000 14852000 15977000 10945000 9194600 16982000 19420000 18614000 8840200 12090000 26057000 44392 714 39774 371541;371542;371543;371544;371545;371546;371547;371548;371549;371550;371551;371552;371553 293235;293236;293237;293238;293239;293240;293241;293242;293243;293244;293245;293246;293247;293248;293249;293250;293251 293241 17 RPLSSSHEASEGQAK Unmodified 1582.7699 0.76994707 3290 Q8IZ21 PHACTR4 Phosphatase and actin regulator 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 6.6321 6.2157 2;3 1.4603E-06 3333 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 72.898 63.361 160640000 101220000 0 0 2996400 2933900 3075600 5305300 3400800 3333400 4278500 8855300 8010400 6181500 5160500 5887000 44393 3290 39775 371554;371555;371556;371557;371558;371559;371560;371561;371562;371563;371564;371565;371566;371567 293252;293253;293254;293255;293256;293257;293258;293259;293260;293261;293262;293263;293264;293265;293266 293262 15 RPLVTPQAAPEPK Unmodified 1402.7932 0.79324869 5298 Q9Y6X8 ZHX2 Zinc fingers and homeoboxes protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 37.178 37.306 3 0.00020875 41192 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 65.295 57.751 62975000 0 0 0 3788500 4513000 4773400 5031600 5483900 5579000 8181900 5504100 0 6640300 5374000 8105600 44394 5298 39776 371568;371569;371570;371571;371572;371573;371574;371575;371576;371577;371578 293267;293268;293269;293270;293271;293272;293273;293274;293275;293276;293277 293275 11 RPMEEDGEEK Unmodified 1218.5187 0.51866633 2207 Q12906 ILF3 Interleukin enhancer-binding factor 3 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6.7377 6.2387 2 0.0055168 4044 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 121.73 65.722 62438000 7510700 9977400 6721600 2372800 1863800 5460200 2597700 2885200 3217200 2981900 3279100 2644000 2703300 3072700 5150200 44395 2207 39777 371579;371580;371581;371582;371583;371584;371585;371586;371587;371588;371589;371590;371591;371592;371593 293278;293279;293280;293281;293282;293283;293284 293280 7 RPMEEDGEEK Oxidation (M) 1234.5136 0.51358095 2207 Q12906 ILF3 Interleukin enhancer-binding factor 3 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 2 3 1 13.329 9.7917 2 0.0033927 4354 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.4 69.954 675200000 577890000 61773000 35529000 0 0 0 0 0 0 0 0 0 0 0 0 44396 2207 39777 371594;371595;371596;371597;371598;371599 293285;293286;293287;293288;293289 293285 3596 2 RPMQAPPGHDQDSLK Unmodified 1675.81 0.81003775 4525 Q9HD26 GOPC Golgi-associated PDZ and coiled-coil motif-containing protein yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By matching By MS/MS 7.71 3.61 2 5 2 1 1 1 1 1 22.996 21.696 3;4 0.0001667 32143 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.165 50.395 65782000 49044000 0 0 0 0 3461400 0 0 0 2121500 3563000 3102900 0 0 4488900 44397 4525 39778 371600;371601;371602;371603;371604;371605;371606 293290;293291;293292;293293 293292 4 RPMQAPPGHDQDSLK Oxidation (M) 1691.805 0.80495237 4525 Q9HD26 GOPC Golgi-associated PDZ and coiled-coil motif-containing protein yes yes 0 1 1 By MS/MS 2 0 1 1 18.841 14.257 3 4.3415E-11 20708 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 111.43 100.57 35682000 35682000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44398 4525 39778 371607 293294;293295;293296 293294 5947 3 RPMQQMQPTAPR 2 Oxidation (M) 1471.7024 0.70240155 3823 Q96EV2 RBM33 RNA-binding protein 33 yes yes 0 2 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 10.417 10.619 3 0.00098283 8996 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 67.385 62.869 46352000 0 0 0 0 0 7266900 0 0 4351200 5637400 0 9374100 5786200 6684700 7251900 44399 3823 39779 371608;371609;371610;371611;371612;371613;371614 293297;293298;293299 293299 5346;5347 1 RPMQQMQPTAPR Unmodified 1439.7126 0.71257231 3823 Q96EV2 RBM33 RNA-binding protein 33 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 26.869 27.13 3 0.00018516 27840 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.781 51.491 79438000 0 0 0 0 6397400 0 6583500 6063000 5347100 7403800 8655000 10937000 6355200 5927400 15769000 44400 3823 39779 371615;371616;371617;371618;371619;371620;371621;371622;371623;371624 293300;293301;293302;293303;293304;293305;293306;293307;293308;293309 293301 10 RPMSSPEMK Unmodified 1061.4998 0.49978556 1663 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes yes 0 0 1 By MS/MS By matching 2 0 2 1 1 18.313 14.311 2 0.017128 20876 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 113.18 81.24 96664000 89012000 7652300 0 0 0 0 0 0 0 0 0 0 0 0 0 44401 1663 39780 371625;371626 293310 293310 0 RPNFKPDIQEIPK Unmodified 1580.8675 0.86747627 3107 Q7Z5K2 WAPAL Wings apart-like protein homolog yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 54.786 55.096 3 0.010224 61634 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.528 54.804 94117000 0 0 0 0 0 10348000 0 15522000 11176000 0 0 14779000 0 8688500 33604000 44402 3107 39781 371627;371628;371629;371630;371631;371632 293311;293312 293311 0 RPNGVSAVALLVGEK Unmodified 1508.8675 0.86747627 4761 Q9NZ63 C9orf78 Uncharacterized protein C9orf78 yes yes 0 0 1 By matching By matching By MS/MS 10 0 3 1 1 1 76.046 76.219 3 0.010888 87523 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 30.536 25.822 13515000 0 0 0 0 0 0 0 0 0 2516600 0 0 0 2509900 8488900 44403 4761 39782 371633;371634;371635 293313 293313 0 RPNKPAELIAK Unmodified 1235.735 0.73500553 2332;2331 Q13619;Q13620 CUL4A;CUL4B Cullin-4A;Cullin-4B no no 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 2 1 1 22.784 22.999 3 0.013605 24367 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 68.786 45.413 347820000 0 0 0 12970000 16801000 27607000 19143000 23811000 9606200 43496000 32697000 38524000 35556000 40887000 46720000 44404 2331;2332 39783 371636;371637;371638;371639;371640;371641;371642;371643;371644;371645;371646;371647;371648 293314;293315;293316;293317;293318;293319 293314 0 RPPAAPENTPLVPSGVK Unmodified 1728.9523 0.95226853 1546 P48634 PRRC2A Protein PRRC2A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55.193 54.447 3 0.00015509 61479 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 58.09 46.65 378740000 56038000 0 6690400 23338000 27464000 18258000 34710000 23226000 20343000 30319000 28838000 31004000 25026000 23289000 30198000 44405 1546 39784 371649;371650;371651;371652;371653;371654;371655;371656;371657;371658;371659;371660;371661;371662 293320;293321;293322;293323;293324;293325;293326;293327;293328;293329;293330;293331;293332;293333;293334;293335;293336;293337 293328 18 RPPDEQRLYK Unmodified 1300.6888 0.68878362 2523 Q15370 TCEB2 Transcription elongation factor B polypeptide 2 yes yes 0 0 2 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 22.53 18.413 3 0.014771 26868 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.596 67.224 664510000 656680000 0 7834000 0 0 0 0 0 0 0 0 0 0 0 0 44406 2523 39785 371663;371664;371665 293338;293339 293339 1 RPPEDFETPSGERPR Unmodified 1768.8493 0.84926002 3538 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 yes yes 0 0 2 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 2 2 2 1 1 2 1 2 2 2 1 33.544 33.696 3;4 0.0066748 36158 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 56.599 36.76 140630000 0 0 0 10251000 8180700 12963000 11656000 0 4798300 16670000 9848200 21049000 21573000 12342000 11294000 44407 3538 39786 371666;371667;371668;371669;371670;371671;371672;371673;371674;371675;371676;371677;371678;371679;371680;371681;371682;371683 293340;293341;293342;293343;293344;293345;293346;293347 293344 3 RPPEIQHFR Unmodified 1178.6309 0.63087481 3912 Q96KQ7 EHMT2 Histone-lysine N-methyltransferase EHMT2 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 26.456 26.707 3 0.0075439 26661 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.348 26.686 86556000 0 0 0 8956700 6335800 0 0 0 10535000 0 11566000 20649000 929690 11234000 16350000 44408 3912 39787 371684;371685;371686;371687;371688;371689;371690;371691 293348;293349;293350;293351 293348 4 RPPEVFEQEIR Unmodified 1398.7256 0.72556306 4287 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 52.306 52.45 3 0.00078285 58221 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.802 48.268 55602000 0 0 0 2397400 2467400 8242200 3878900 0 1865300 0 6055900 11341000 5119000 3891000 10344000 44409 4287 39788 371692;371693;371694;371695;371696;371697;371698;371699;371700;371701 293352;293353;293354;293355;293356;293357;293358;293359 293357 8 RPPINVAIDR Unmodified 1149.6618 0.66184059 1976 P78346 RPP30 Ribonuclease P protein subunit p30 yes yes 0 0 1 By matching By MS/MS By MS/MS 10 0 3 1 1 1 45.37 45.813 3 0.039164 50260 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.977 35.814 22362000 0 0 0 0 0 0 0 0 0 0 0 0 6415900 4074700 11872000 44410 1976 39789 371702;371703;371704 293360;293361 293360 0 RPPNSVVTQHEPAGQNEK Unmodified 1986.9872 0.98715049 3574 Q8WWK9 CKAP2 Cytoskeleton-associated protein 2 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 19.952 20.254 3 0.0024039 20210 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 33.836 17.893 7499300 0 0 0 0 0 0 3738200 0 0 0 0 3761000 0 0 0 44411 3574 39790 371705;371706 293362;293363 293363 2 RPPSSSSSSSASSYTGRPIELDK Unmodified 2395.1615 0.16154562 4273 Q9BZL6 PRKD2 Serine/threonine-protein kinase D2 yes yes 0 0 2 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 1 2 2 2 2 2 2 2 2 2 2 40.562 40.803 3;4 6.7558E-42 44387 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 104.81 67.722 217240000 0 0 0 5174600 5758900 15031000 17011000 25642000 12385000 21366000 22692000 32934000 23393000 15450000 20399000 44412 4273 39791 371707;371708;371709;371710;371711;371712;371713;371714;371715;371716;371717;371718;371719;371720;371721;371722;371723;371724;371725;371726;371727;371728 293364;293365;293366;293367;293368;293369;293370;293371;293372;293373;293374;293375;293376;293377;293378;293379;293380;293381 293370 15 RPPTAGSQFK Unmodified 1087.5774 0.57744226 367 O43795 MYO1B Unconventional myosin-Ib yes yes 0 0 1 By MS/MS 10 0 1 1 14.465 14.421 2 0.026282 14013 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 77.318 22.768 8139800 0 0 0 0 0 8139800 0 0 0 0 0 0 0 0 0 44413 367 39792 371729 293382 293382 1 RPPTMTVSEASYQSERVEEK Oxidation (M) 2339.1063 0.10633893 3573 Q8WWI1 LMO7 LIM domain only protein 7 yes yes 0 1 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34.822 34.252 3 2.9991E-88 36723 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 171.3 155.4 244850000 46265000 0 2394800 8216800 11022000 18582000 14500000 9128500 13761000 21408000 22357000 28875000 12240000 17041000 19059000 44414 3573 39793 371730;371731;371732;371733;371734;371735;371736;371737;371738;371739;371740;371741;371742;371743 293383;293384;293385;293386;293387;293388;293389;293390;293391;293392;293393;293394;293395 293393 5065 13 RPPTMTVSEASYQSERVEEK Unmodified 2323.1114 0.1114243 3573 Q8WWI1 LMO7 LIM domain only protein 7 yes yes 0 0 2 By MS/MS By matching By MS/MS 6.8 3.92 2 3 2 1 2 47.843 44.984 3;4 1.4949E-102 62035 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 175.59 144.1 111220000 80968000 0 0 0 0 0 0 0 0 0 0 0 0 6071100 24183000 44415 3573 39793 371744;371745;371746;371747;371748 293396;293397;293398;293399 293399 4 RPQANSVESEQK Unmodified 1371.6743 0.67425577 4795 Q9P0L2 MARK1 Serine/threonine-protein kinase MARK1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 7.0277 7.1564 3 0.0004698 4611 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.301 45.202 13062000 0 0 0 0 1435400 0 0 0 2346200 0 0 5034600 0 0 4245300 44416 4795 39794 371749;371750;371751;371752;371753 293400;293401;293402;293403;293404 293400 4 RPQIDPAVEGFIR Unmodified 1496.81 0.80996139 3535 Q8WU79 SMAP2 Stromal membrane-associated protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 72.647 72.808 3 0.00031487 83192 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.823 31.228 29617000 0 0 0 0 0 4101200 3528100 0 2798100 3783500 0 0 0 2540100 12866000 44417 3535 39795 371754;371755;371756;371757;371758;371759 293405;293406;293407;293408;293409;293410 293408 6 RPQQPNPPSAPLVPGLLDQSNPLSTPMPK Oxidation (M) 3091.6125 0.61245414 3538 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 85.258 85.369 3 2.7041E-23 99098 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 70.983 68.533 37846000 0 0 0 0 0 6603200 0 0 0 9558900 0 6644400 0 0 15039000 44418 3538 39796 371760;371761;371762;371763 293411;293412;293413;293414;293415 293415 5031 5 RPQYCSETQSK Unmodified 1382.6249 0.62486274 3134 Q86TC9 MYPN Myopalladin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.67 1.6 1 23 1 2 2 2 2 2 2 2 2 1 2 2 2 7.5872 7.5451 2;3 7.4996E-05 4556 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 87.667 74.659 311750000 104340000 0 0 8868300 11014000 11865000 11138000 12064000 15643000 6411100 44943000 13397000 26141000 31744000 14173000 44419 3134 39797 371764;371765;371766;371767;371768;371769;371770;371771;371772;371773;371774;371775;371776;371777;371778;371779;371780;371781;371782;371783;371784;371785;371786;371787 293416;293417;293418;293419;293420;293421;293422;293423;293424;293425;293426;293427;293428;293429;293430;293431 293425 15 RPQYRPQYR Unmodified 1262.6632 0.66323757 1044 P16989 YBX3 Y-box-binding protein 3 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.47 14.632 3 0.032082 13357 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 67.897 54.778 410520000 0 0 0 17433000 5754600 22939000 15217000 14721000 25084000 30578000 37737000 73461000 60287000 33245000 74068000 44420 1044 39798 371788;371789;371790;371791;371792;371793;371794;371795;371796;371797;371798;371799 293432 293432 0 RPQYSNPPVQGEVMEGADNQGAGEQGR Oxidation (M) 2886.2951 0.29509576 1955 P67809 YBX1 Nuclease-sensitive element-binding protein 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 40.742 40.991 3 2.6178E-107 45759 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 131.57 119.25 82718000 0 0 0 0 7465100 6657300 8243400 0 4838400 7537500 8060900 10453000 13119000 5522200 10821000 44421 1955 39799 371800;371801;371802;371803;371804;371805;371806;371807;371808;371809 293433;293434;293435;293436;293437;293438;293439;293440;293441;293442;293443;293444;293445 293442 3140 13 RPQYSNPPVQGEVMEGADNQGAGEQGR Unmodified 2870.3002 0.30018114 1955 P67809 YBX1 Nuclease-sensitive element-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 49.383 49.813 3 1.0239E-109 55350 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 142.2 138.93 73698000 0 0 0 0 0 0 0 0 0 8818200 0 22435000 14008000 12969000 15468000 44422 1955 39799 371810;371811;371812;371813;371814;371815 293446;293447;293448;293449;293450;293451;293452 293447 7 RPQYSNPPVQGEVMEGADNQGAGEQGRPVR Oxidation (M) 3238.5174 0.51738456 1955 P67809 YBX1 Nuclease-sensitive element-binding protein 1 yes yes 0 1 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.972 42.149 4 2.1303E-228 47002 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 199.87 193.9 2940800000 0 0 0 106170000 256680000 230260000 178230000 96932000 173100000 354440000 251920000 405110000 384110000 240900000 262910000 44423 1955 39800 371816;371817;371818;371819;371820;371821;371822;371823;371824;371825;371826;371827 293453;293454;293455;293456;293457;293458;293459;293460;293461;293462;293463;293464;293465;293466;293467;293468;293469 293459 3140 17 RPQYSNPPVQGEVMEGADNQGAGEQGRPVR Unmodified 3222.5225 0.52246994 1955 P67809 YBX1 Nuclease-sensitive element-binding protein 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 49.921 50.075 3;4 1.2887E-178 56134 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 178.41 170.89 2719800000 0 0 0 79269000 139220000 215500000 94481000 207960000 141370000 181480000 241770000 392190000 216980000 382400000 427180000 44424 1955 39800 371828;371829;371830;371831;371832;371833;371834;371835;371836;371837;371838;371839;371840;371841;371842;371843;371844;371845;371846;371847;371848;371849;371850;371851 293470;293471;293472;293473;293474;293475;293476;293477;293478;293479;293480;293481;293482;293483;293484;293485;293486;293487;293488;293489;293490;293491;293492;293493;293494;293495;293496;293497;293498;293499 293492 30 RPRDDEEEEQK Unmodified 1429.6433 0.64334957 3600 Q8WYA6 CTNNBL1 Beta-catenin-like protein 1 yes yes 0 0 2 By MS/MS 2 0 1 1 5.6392 2.2617 3 0.0078492 5114 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.871 53.443 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44425 3600 39801 371852 293500 293500 1 RPRDDSDSTLK Unmodified 1288.6371 0.63714198 3663 Q92797 SYMPK Symplekin yes yes 0 0 2 By MS/MS 2 0 1 1 7.5178 4.0027 2 0.0089488 7261 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 99.973 49.933 17627000 17627000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44426 3663 39802 371853 293501;293502 293502 2 RPREGEAEGAETTK Unmodified 1529.7434 0.74339797 715 O96017 CHEK2 Serine/threonine-protein kinase Chk2 yes yes 0 0 2 By MS/MS By matching 2 0 3 2 1 6.7504 3.7231 3;4 0.00040224 6645 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.285 44.984 287810000 285430000 0 2372100 0 0 0 0 0 0 0 0 0 0 0 0 44427 715 39803 371854;371855;371856 293503;293504;293505 293504 3 RPRPPNAPSQDGK Unmodified 1418.7379 0.73785908 1044 P16989 YBX3 Y-box-binding protein 3 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 10.251 10.384 3 3.9776E-11 9475 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 111.79 75.376 607000000 0 0 0 31782000 30818000 42511000 40708000 29880000 25724000 47353000 70643000 89555000 63932000 64358000 69734000 44428 1044 39804 371857;371858;371859;371860;371861;371862;371863;371864;371865;371866;371867;371868 293506;293507;293508;293509;293510;293511;293512;293513;293514;293515;293516;293517;293518;293519 293516 11 RPRPSTPAEEDEDDPEQEK Unmodified 2223.988 0.98799793 245 O15047 SETD1A Histone-lysine N-methyltransferase SETD1A yes yes 0 0 2 By MS/MS 2 0 2 2 24.075 19.1 3;4 9.1117E-13 27191 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.44 56.124 11407000 11407000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44429 245 39805 371869;371870 293520;293521 293520 2 RPSAPVDFSK Unmodified 1102.5771 0.57710791 2440 Q14696 MESDC2 LDLR chaperone MESD yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS 6 4 2 2 1 1 1 1 36.194 33.777 2 0.0023168 47481 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 115.78 58.5 213030000 199820000 0 4589000 0 0 0 0 0 1793600 0 0 0 0 6824100 0 44430 2440 39806 371871;371872;371873;371874 293522;293523;293524 293522 1 RPSDENTIAPSEVQK Unmodified 1669.8271 0.8271276 3180 Q86W92 PPFIBP1 Liprin-beta-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 1 2 1 2 1 1 1 2 1 1 28.723 28.923 2;3 2.3823E-13 31312 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 107.18 70.651 209610000 0 0 0 9264100 10382000 10813000 11713000 13811000 13644000 18828000 29659000 22082000 30871000 17130000 21414000 44431 3180 39807 371875;371876;371877;371878;371879;371880;371881;371882;371883;371884;371885;371886;371887;371888;371889 293525;293526;293527;293528;293529;293530;293531;293532;293533;293534;293535;293536;293537;293538;293539;293540 293538 14 RPSEGPQPLVR Unmodified 1234.6782 0.67821894 2778 Q5T5Y3 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 26.189 26.441 3 0.044081 28228 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 18.81 9.1549 43484000 0 0 0 2169400 0 4264000 4402800 2797400 2250200 5969000 4766000 5640100 3343700 2647200 5234600 44432 2778 39808 371890;371891;371892;371893;371894;371895;371896;371897;371898;371899;371900 293541 293541 1 RPSFSSTPVISPAPNSTPANSNTNSNSSLITSQDAVER Unmodified 3929.8991 0.89912993 17 A3KN83 SBNO1 Protein strawberry notch homolog 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 16 2 2 1 2 2 1 2 1 1 2 74.325 74.423 3;4 1.1775E-124 85930 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 115.77 108.03 139730000 0 0 0 0 8497000 14008000 5323700 0 12572000 27109000 9411300 22366000 9201700 6159000 25080000 44433 17 39809 371901;371902;371903;371904;371905;371906;371907;371908;371909;371910;371911;371912;371913;371914;371915;371916 293542;293543;293544;293545;293546;293547;293548;293549;293550;293551;293552 293551 11 RPSLGLAPGGLAVVGR Unmodified 1518.8994 0.8994451 690 O95785 WIZ Protein Wiz yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 74.804 74.967 3 0.00027754 86003 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 42.647 38.467 50633000 0 0 0 0 0 8675300 1902900 2669400 6430100 3187300 2661000 5471900 4518500 3404900 11712000 44434 690 39810 371917;371918;371919;371920;371921;371922;371923;371924;371925;371926 293553;293554;293555;293556;293557;293558;293559;293560 293556 7 RPSNSTPPPTQLSK Unmodified 1508.7947 0.79470526 2442 Q14738 PPP2R5D Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 22.137 21.657 3 0.0028493 30929 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 44.807 35.525 276510000 118650000 0 6326700 9845800 5688600 22982000 13223000 12954000 7889000 16835000 16280000 12286000 0 14906000 18647000 44435 2442 39811 371927;371928;371929;371930;371931;371932;371933;371934;371935;371936;371937;371938;371939 293561;293562;293563;293564;293565;293566;293567 293563 7 RPSPDEPMTNLELK Oxidation (M) 1641.8032 0.80322103 4896 Q9UHD1 CHORDC1 Cysteine and histidine-rich domain-containing protein 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.07 3.94 6 1 7 2 2 3 1 1 1 1 1 1 1 47.375 44.536 2;3 7.9186E-23 57694 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.68 68.918 958930000 84257000 86827000 533270000 0 20698000 54658000 40947000 26839000 0 0 0 41958000 0 0 69471000 44436 4896 39812 371940;371941;371942;371943;371944;371945;371946;371947;371948;371949;371950;371951;371952;371953 293568;293569;293570;293571;293572;293573;293574;293575;293576;293577;293578;293579;293580;293581;293582 293571 6251 12 RPSPDEPMTNLELK Unmodified 1625.8083 0.80830641 4896 Q9UHD1 CHORDC1 Cysteine and histidine-rich domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.88 3.49 6 1 19 2 3 2 1 1 2 1 1 1 2 2 2 2 2 2 58.936 57.51 2;3 9.265E-29 72369 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 137.16 99.436 1316500000 115780000 298880000 377640000 18384000 14579000 72539000 25721000 27207000 16121000 48926000 53456000 46293000 32680000 52230000 116090000 44437 4896 39812 371954;371955;371956;371957;371958;371959;371960;371961;371962;371963;371964;371965;371966;371967;371968;371969;371970;371971;371972;371973;371974;371975;371976;371977;371978;371979 293583;293584;293585;293586;293587;293588;293589;293590;293591;293592;293593;293594;293595;293596;293597;293598;293599;293600;293601;293602;293603;293604;293605;293606;293607;293608;293609;293610;293611;293612;293613;293614 293605 30 RPSPLSENVSELK Unmodified 1454.7729 0.77290718 4036 Q99618 CDCA3 Cell division cycle-associated protein 3 yes yes 0 0 1 By MS/MS 2 0 1 1 57.497 49.317 3 0.00067539 67155 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.095 52.742 41089000 41089000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44438 4036 39813 371980 293615 293615 1 RPSQEEDTQSIGPK Unmodified 1570.7587 0.75871368 2606 Q16526 CRY1 Cryptochrome-1 yes yes 0 0 1 By MS/MS 2 0 1 1 20.677 17.963 3 0.00084668 22818 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 66.246 55.636 5180300 0 0 5180300 0 0 0 0 0 0 0 0 0 0 0 0 44439 2606 39814 371981 293616 293616 1 RPSQEQSASASSGQPQAPLNR Unmodified 2195.0679 0.067920004 2768 Q5T1M5 FKBP15 FK506-binding protein 15 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.032 26.233 3 6.5486E-12 27547 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 81.016 77.825 54540000 0 0 0 3570500 4039100 4307700 3835300 3721600 3652600 3901900 4126400 7659900 4178900 4680700 6865800 44440 2768 39815 371982;371983;371984;371985;371986;371987;371988;371989;371990;371991;371992;371993 293617;293618;293619;293620;293621;293622;293623;293624;293625;293626;293627;293628 293626 12 RPSRPSNSNISK Unmodified 1341.7113 0.71130998 2914 Q6P158 DHX57 Putative ATP-dependent RNA helicase DHX57 yes yes 0 0 2 By MS/MS 10 0 1 1 6.4273 6.7617 3 0.025453 4005 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.435 25.79 7597900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7597900 44441 2914 39816 371994 293629 293629 1 RPSSLLVDCQSSSEISDHSFGDIPASQTNK Unmodified 3261.5208 0.52079818 2752 Q5R372 RABGAP1L Rab GTPase-activating protein 1-like yes yes 0 0 1 By MS/MS 2 0 1 1 78.58 70.449 4 0.00016611 92605 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 38.553 36.032 26990000 26990000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44442 2752 39817 371995 293630;293631 293631 2 RPSSLQSLFGLPEAAGAR Unmodified 1855.9904 0.99044495 1406 P39880 CUX1 Homeobox protein cut-like 1 yes yes 0 0 1 By MS/MS 10 0 1 1 83.256 83.447 3 0.0026178 96313 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.142 27.482 8085500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8085500 44443 1406 39818 371996 293632 293632 1 RPSTFGIPR Unmodified 1029.572 0.57196295 1977 P78347 GTF2I General transcription factor II-I yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 40.075 40.353 2 0.032429 44829 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 91.853 50.201 405790000 0 0 0 0 26605000 65307000 0 0 0 61190000 73352000 92718000 0 0 86616000 44444 1977 39819 371997;371998;371999;372000;372001;372002 293633;293634 293633 1 RPSTSQTVSTPAPVPVIESTEAIEAK Unmodified 2694.4076 0.40758955 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 4 1 1 1 1 1 1 1 1 1 1 1 1 1 78.921 77.159 3;4 1.0538E-78 98229 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 137.03 130.52 1968500000 839230000 0 140540000 15798000 45639000 74897000 52151000 55574000 56620000 126030000 102080000 124310000 67547000 99970000 168080000 44445 965 39820 372003;372004;372005;372006;372007;372008;372009;372010;372011;372012;372013;372014;372015;372016;372017;372018;372019 293635;293636;293637;293638;293639;293640;293641;293642;293643;293644;293645;293646;293647;293648;293649;293650;293651;293652;293653;293654;293655;293656 293641 20 RPSTYGIPR Unmodified 1045.5669 0.56687757 1977 P78347 GTF2I General transcription factor II-I yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.652 28.846 2 0.047284 30297 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.827 43.03 458900000 0 0 0 34127000 37243000 27933000 23638000 24464000 16455000 47804000 49321000 59639000 47564000 38609000 52107000 44446 1977 39821 372020;372021;372022;372023;372024;372025;372026;372027;372028;372029;372030;372031 293657 293657 1 RPSVDSLVSK Unmodified 1086.6033 0.60332266 3025 Q70E73 RAPH1 Ras-associated and pleckstrin homology domains-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 33.866 34.084 2 0.012864 37251 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 100.02 42.84 83459000 0 0 0 0 7072100 0 7435700 0 6408100 7461900 12517000 11954000 14664000 15947000 0 44447 3025 39822 372032;372033;372034;372035;372036;372037;372038;372039 293658 293658 0 RPSVGSQSNQAGQGK Unmodified 1499.7441 0.74406667 5053 Q9UPP1 PHF8 Histone lysine demethylase PHF8 yes yes 0 0 1 By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 6.6069 6.714 3 1.1804E-97 4171 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 153.7 140.69 119140000 0 0 0 7217300 7346000 9333800 10312000 8043000 10188000 13882000 0 12624000 11690000 12165000 16336000 44448 5053 39823 372040;372041;372042;372043;372044;372045;372046;372047;372048;372049;372050 293659;293660;293661;293662;293663;293664;293665;293666 293660 8 RPTEICADPQFIIGGATR Unmodified 2001.0102 0.010194116 1057 P17655 CAPN2 Calpain-2 catalytic subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 76.259 76.279 3 2.9296E-06 87932 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 63.302 52.963 125690000 0 0 0 3026600 2974400 12321000 0 0 0 18641000 13446000 14861000 10761000 15117000 34540000 44449 1057 39824 372051;372052;372053;372054;372055;372056;372057;372058;372059 293667;293668;293669;293670;293671;293672;293673;293674;293675 293667 9 RPTELLSNPQFIVDGATR Unmodified 2013.0643 0.064338176 841 P07384 CAPN1 Calpain-1 catalytic subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.615 78.72 3 2.3796E-22 91019 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 104.76 98.204 346120000 0 0 0 0 8987400 27677000 9333700 25977000 26183000 36676000 21429000 24846000 17632000 25737000 121640000 44450 841 39825 372060;372061;372062;372063;372064;372065;372066;372067;372068;372069;372070;372071 293676;293677;293678;293679;293680;293681;293682;293683;293684;293685;293686;293687;293688;293689;293690;293691;293692 293678 17 RPTPNDDTLDEGVGLVHSNIATEHIPSPAK Unmodified 3179.5847 0.58471907 2057 Q01581 HMGCS1 Hydroxymethylglutaryl-CoA synthase, cytoplasmic yes yes 0 0 1 By MS/MS 10 0 1 1 75.572 75.883 4 0.049689 86930 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 9.1164 2.8891 17619000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17619000 44451 2057 39826 372072 293693 293693 1 RPTPQDSPIFLPVDDTSFR Unmodified 2187.096 0.096032235 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 83.589 83.685 3 2.6298E-31 96844 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 88.176 79.682 354850000 0 0 0 0 6239200 59499000 12318000 30140000 20374000 71047000 46234000 53106000 17076000 38814000 0 44452 1565 39827 372073;372074;372075;372076;372077;372078;372079;372080;372081;372082 293694;293695;293696;293697;293698;293699;293700;293701;293702;293703;293704;293705;293706 293696 13 RPVDSYDIPK Unmodified 1188.6139 0.61388734 3573 Q8WWI1 LMO7 LIM domain only protein 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 36.444 36.624 2;3 0.0013705 40494 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 73.499 57.87 391630000 0 0 0 24533000 24675000 24395000 23673000 22987000 26176000 29461000 34363000 51444000 39448000 38943000 51532000 44453 3573 39828 372083;372084;372085;372086;372087;372088;372089;372090;372091;372092;372093;372094;372095;372096;372097;372098;372099;372100;372101;372102;372103;372104;372105;372106 293707;293708;293709;293710;293711;293712;293713;293714;293715;293716;293717;293718;293719 293715 7 RPVGASFSFGGK Unmodified 1208.6302 0.63020611 614 O94979 SEC31A Protein transport protein Sec31A yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 47.303 47.748 3 0.016256 52524 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.567 19.755 17425000 0 0 0 0 0 0 1736300 0 0 0 0 7374500 0 2526000 5788000 44454 614 39829 372107;372108;372109;372110 293720;293721 293720 2 RPVHGESDTEQLQDDDIETTK Unmodified 2412.1041 0.10409032 4200 Q9BW27 NUP85 Nuclear pore complex protein Nup85 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 34.067 34.581 3 1.1369E-47 36899 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 113.51 105.02 42849000 0 0 0 0 0 0 0 0 0 0 11453000 11094000 4696800 3291500 12314000 44455 4200 39830 372111;372112;372113;372114;372115 293722;293723;293724;293725;293726 293722 4 RPVHLDQAAFR Unmodified 1308.7051 0.70510239 4323 Q9H0D6 XRN2 5'-3' exoribonuclease 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 35.884 36.008 3 0.0011187 38746 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 52.247 43.035 34621000 0 0 0 2823600 0 5066100 3823200 0 4686600 3487200 3933000 0 3258100 7543400 0 44456 4323 39831 372116;372117;372118;372119;372120;372121;372122;372123 293727;293728;293729;293730;293731;293732;293733 293732 7 RPVSAMFIFSEEK Oxidation (M) 1555.7705 0.77046434 1053 P17480 UBTF Nucleolar transcription factor 1 yes yes 0 1 1 By MS/MS By matching By matching By MS/MS 10 0 4 1 1 1 1 66.184 66.358 2;3 0.026358 76394 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 40.278 37.081 21722000 0 0 0 0 0 13106000 1226500 0 1681400 0 0 5707900 0 0 0 44457 1053 39832 372124;372125;372126;372127 293734;293735 293734 1 RPVSGVGDAPGTSNGATVSSTK Unmodified 2044.0185 0.018510196 3637 Q92610 ZNF592 Zinc finger protein 592 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 33.73 28.921 3 0.00056902 40357 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.444 48.071 23780000 21349000 0 2431300 0 0 0 0 0 0 0 0 0 0 0 0 44458 3637 39833 372128;372129 293736;293737 293736 2 RPWITGDESIVGLMK Oxidation (M) 1716.8869 0.88689108 2629 Q16719 KYNU Kynureninase yes yes 0 1 1 By MS/MS 10 0 1 1 75.09 75.401 3 0.00015624 86459 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.861 58.558 10036000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10036000 44459 2629 39834 372130 293738 293738 4285 1 RPWLSATPSSGASAAR Unmodified 1613.8274 0.82740237 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 44.752 45.099 3 0.00026713 50515 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 40.085 25.294 50842000 0 0 0 0 0 0 0 0 0 0 14592000 0 18288000 17962000 0 44460 4139 39835 372131;372132;372133;372134 293739;293740;293741;293742 293741 4 RPYAPINANAIK Unmodified 1326.7408 0.74081919 583 O94776 MTA2 Metastasis-associated protein MTA2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 44.661 44.833 2;3 0.0019639 50362 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 36.954 28.467 652540000 0 0 0 50527000 35039000 58345000 34964000 47311000 37443000 78410000 53650000 83362000 43643000 38237000 91612000 44461 583 39836 372135;372136;372137;372138;372139;372140;372141;372142;372143;372144;372145;372146;372147;372148;372149;372150;372151;372152;372153;372154;372155;372156;372157;372158 293743;293744;293745;293746;293747;293748;293749;293750;293751;293752;293753;293754;293755;293756 293743 9 RPYEPINSIK Unmodified 1215.6612 0.66117189 3538 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.667 36.848 2 0.019806 41483 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 96.342 96.342 127680000 0 0 0 7637100 8056600 11358000 7399300 7349900 6434400 10333000 12609000 15632000 13070000 9447100 18350000 44462 3538 39837 372159;372160;372161;372162;372163;372164;372165;372166;372167;372168;372169;372170 293757;293758;293759;293760;293761;293762;293763 293762 6 RPYTVILIER Unmodified 1258.7398 0.73975656 5146 Q9Y3A5 SBDS Ribosome maturation protein SBDS yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching 10 0 8 1 1 1 1 1 1 1 1 64.729 64.972 3 0.015281 74461 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 37.995 20.186 34946000 0 0 0 0 0 3792900 0 0 4644800 3783600 2854700 4384500 2468300 2630100 10387000 44463 5146 39838 372171;372172;372173;372174;372175;372176;372177;372178 293764;293765 293764 2 RQAEIERETSVR Unmodified 1472.7696 0.76955314 3573 Q8WWI1 LMO7 LIM domain only protein 7 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 15.186 15.39 3 1.1139E-08 13927 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 128.54 115.12 339230000 0 0 0 14561000 0 11274000 19163000 21102000 13708000 29449000 48170000 48189000 40866000 30855000 61896000 44464 3573 39839 372179;372180;372181;372182;372183;372184;372185;372186;372187;372188;372189 293766;293767;293768;293769;293770;293771 293766 3 RQAELDGK Unmodified 915.47739 0.47739386 1029 P15924 DSP Desmoplakin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 5.7565 4.9383 2 5.804E-47 3453 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 191.78 94.178 78604000 0 0 50110000 28228000 265730 0 0 0 0 0 0 0 0 0 0 44465 1029 39840 372190;372191;372192 293772;293773 293773 2 RQAELLEK Unmodified 985.55564 0.55564418 3987;1979 P78362;Q96SB4 SRPK2;SRPK1 SRSF protein kinase 2;SRSF protein kinase 2 N-terminal;SRSF protein kinase 2 C-terminal;SRSF protein kinase 1 no no 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 24.002 19.501 2 0.043109 27642 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.54 16.33 146980000 140550000 6429300 0 0 0 0 0 0 0 0 0 0 0 0 0 44466 1979;3987 39841 372193;372194 293774 293774 1 RQAEVELASR Unmodified 1157.6153 0.61528433 2501 Q15149 PLEC Plectin yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching 10 0 8 1 1 1 1 1 1 1 1 20.95 21.114 3 0.039043 21317 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 29.805 13.272 68819000 0 0 0 6838200 0 5671700 5000300 5853000 0 6822200 11079000 0 22829000 4726100 0 44467 2501 39842 372195;372196;372197;372198;372199;372200;372201;372202 293775 293775 1 RQAFTPSSTMMEVFLQEK 2 Oxidation (M) 2161.0184 0.018375541 2380 Q14157 UBAP2L Ubiquitin-associated protein 2-like yes yes 0 2 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 64.799 64.887 3 8.0224E-39 74002 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 131.18 116.22 522730000 0 0 0 28962000 21312000 47490000 37013000 41507000 43056000 45544000 67225000 54453000 41271000 37909000 56989000 44468 2380 39843 372203;372204;372205;372206;372207;372208;372209;372210;372211;372212;372213;372214;372215;372216;372217;372218;372219;372220;372221;372222;372223;372224;372225;372226 293776;293777;293778;293779;293780;293781;293782;293783;293784;293785;293786;293787;293788;293789;293790;293791;293792;293793;293794;293795;293796;293797;293798;293799;293800;293801 293784 3874;3875 26 RQAFTPSSTMMEVFLQEK Oxidation (M) 2145.0235 0.023460919 2380 Q14157 UBAP2L Ubiquitin-associated protein 2-like yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 78.986 79.147 3 4.6615E-08 91182 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.316 72.164 48306000 0 0 0 0 0 0 0 0 6233000 5680400 5826200 7314800 3105600 0 20146000 44469 2380 39843 372227;372228;372229;372230;372231;372232 293802;293803;293804;293805;293806 293803 3874;3875 5 RQAFTPSSTMMEVFLQEK Unmodified 2129.0285 0.028546296 2380 Q14157 UBAP2L Ubiquitin-associated protein 2-like yes yes 0 0 1 By MS/MS 10 0 1 1 87.107 87.265 3 0.0018093 100897 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 20.587 15.494 2684300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2684300 44470 2380 39843 372233 293807 293807 1 RQALVEFENIDSAK Unmodified 1618.8315 0.83148469 3567 Q8WVV9 HNRNPLL Heterogeneous nuclear ribonucleoprotein L-like yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.15 3.37 3 10 2 1 1 1 1 1 1 1 1 1 1 1 65.01 63.577 2;3 3.346E-38 86597 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 161.48 118.76 249460000 146780000 0 2947400 0 5895100 11669000 6424100 6099500 6537100 8679600 0 15688000 8312500 9171500 21256000 44471 3567 39844 372234;372235;372236;372237;372238;372239;372240;372241;372242;372243;372244;372245;372246 293808;293809;293810;293811;293812;293813;293814;293815;293816;293817;293818;293819;293820;293821 293814 13 RQANWSLEEEK Unmodified 1388.6684 0.66844211 3901 Q96K21 ZFYVE19 Abscission/NoCut checkpoint regulator yes yes 0 0 1 By MS/MS 2 0 1 1 42.786 36.05 3 0.0068115 49530 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.132 46.6 36783000 36783000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44472 3901 39845 372247 293822 293822 1 RQAPPPPPPSR Unmodified 1198.6571 0.65708956 147 O00401 WASL Neural Wiskott-Aldrich syndrome protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 9.1557 9.2896 3 0.0017586 5970 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 47.559 36.395 175420000 0 0 0 13196000 13771000 9935600 14892000 9600800 9051900 7558300 35444000 33915000 12210000 5787100 10062000 44473 147 39846 372248;372249;372250;372251;372252;372253;372254;372255;372256;372257;372258;372259 293823;293824;293825;293826;293827;293828;293829;293830;293831;293832 293827 7 RQAQQERDELADEIANSSGK Unmodified 2244.0731 0.073064962 1356 P35579 MYH9 Myosin-9 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.8 2.85 14 1 84 7 5 3 7 8 9 6 10 7 6 3 10 5 7 6 45.601 45.217 2;3;4 1.7366E-192 49376 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 215.06 202.12 3765300000 392970000 70076000 69110000 94085000 110440000 358580000 93899000 186770000 217150000 314660000 202000000 678910000 281870000 188380000 506350000 44474 1356 39847 372260;372261;372262;372263;372264;372265;372266;372267;372268;372269;372270;372271;372272;372273;372274;372275;372276;372277;372278;372279;372280;372281;372282;372283;372284;372285;372286;372287;372288;372289;372290;372291;372292;372293;372294;372295;372296;372297;372298;372299;372300;372301;372302;372303;372304;372305;372306;372307;372308;372309;372310;372311;372312;372313;372314;372315;372316;372317;372318;372319;372320;372321;372322;372323;372324;372325;372326;372327;372328;372329;372330;372331;372332;372333;372334;372335;372336;372337;372338;372339;372340;372341;372342;372343;372344;372345;372346;372347;372348;372349;372350;372351;372352;372353;372354;372355;372356;372357;372358 293833;293834;293835;293836;293837;293838;293839;293840;293841;293842;293843;293844;293845;293846;293847;293848;293849;293850;293851;293852;293853;293854;293855;293856;293857;293858;293859;293860;293861;293862;293863;293864;293865;293866;293867;293868;293869;293870;293871;293872;293873;293874;293875;293876;293877;293878;293879;293880;293881;293882;293883;293884;293885;293886;293887;293888;293889;293890;293891;293892;293893;293894;293895;293896;293897;293898;293899;293900;293901;293902;293903;293904;293905;293906;293907;293908;293909;293910;293911;293912;293913;293914;293915;293916;293917;293918;293919;293920;293921;293922;293923;293924;293925;293926;293927 293877 83 RQAQSPAGVSSEVEVLK Unmodified 1783.9428 0.94282606 2239 Q13136 PPFIA1 Liprin-alpha-1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 61.596 54.809 2;3 7.2469E-05 74125 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.028 59.985 96235000 81977000 0 14258000 0 0 0 0 0 0 0 0 0 0 0 0 44475 2239 39848 372359;372360;372361 293928;293929;293930;293931 293929 4 RQAQSPGGVSSEVEVLK Unmodified 1769.9272 0.92717599 460 O75145 PPFIA3 Liprin-alpha-3 yes yes 0 0 1 By MS/MS 2 0 1 1 59.738 51.512 3 0.0011532 70032 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.039 49.353 13731000 13731000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44476 460 39849 372362 293932 293932 1 RQARPPDASAAR Unmodified 1294.6854 0.68542958 690 O95785 WIZ Protein Wiz yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.1321 7.2557 3 0.016288 4678 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.997 48.338 71897000 0 0 0 2838900 4641200 5102200 3825400 3897300 3665500 4992200 11491000 8818300 6229200 8435900 7959800 44477 690 39850 372363;372364;372365;372366;372367;372368;372369;372370;372371;372372;372373;372374 293933;293934 293933 1 RQATDDATLLIVNR Unmodified 1584.8584 0.85836815 463 O75150 RNF40 E3 ubiquitin-protein ligase BRE1B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 2 1 1 1 1 1 1 1 1 61.659 61.761 3 0.00048321 70078 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 46.964 41.06 164870000 0 0 0 6579000 6098000 11664000 12543000 11836000 9193700 13085000 14141000 21591000 15750000 13521000 28872000 44478 463 39851 372375;372376;372377;372378;372379;372380;372381;372382;372383;372384;372385;372386;372387 293935;293936;293937;293938;293939;293940;293941;293942;293943;293944;293945;293946;293947 293940 13 RQAVDVSPLR Unmodified 1139.6411 0.64110515 1512 P46782 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 35.129 35.644 3 0.0020417 39241 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 56.359 17.211 987780000 0 0 0 0 0 0 0 0 0 0 141700000 208240000 210720000 163210000 263910000 44479 1512 39852 372388;372389;372390;372391;372392 293948;293949;293950;293951;293952 293951 5 RQAVDVSPLRR Unmodified 1295.7422 0.74221618 1512 P46782 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.318 29.51 3 0.0024262 30770 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 99.752 82.81 687550000 0 0 0 34125000 26192000 49066000 29701000 44824000 24347000 52706000 67273000 106670000 105830000 43676000 103140000 44480 1512 39853 372393;372394;372395;372396;372397;372398;372399;372400;372401;372402;372403;372404 293953;293954;293955;293956;293957;293958;293959;293960;293961;293962;293963;293964 293960 3 RQAVTNPNNTFYATK Unmodified 1723.8642 0.86418181 1399 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 37.058 36.061 2;3 3.1663E-30 50297 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 147.24 115.81 563410000 170720000 0 1919800 20754000 15974000 21930000 20501000 21412000 19917000 32186000 36795000 47884000 28913000 42778000 81727000 44481 1399 39854 372405;372406;372407;372408;372409;372410;372411;372412;372413;372414;372415;372416;372417;372418;372419 293965;293966;293967;293968;293969;293970;293971;293972 293968 3 RQDMANAFAQK Unmodified 1278.6139 0.61390412 3895 Q96JJ3 ELMO2 Engulfment and cell motility protein 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 34.647 29.325 2;3 0.0002164 40979 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.767 64.155 55315000 52358000 0 2957300 0 0 0 0 0 0 0 0 0 0 0 0 44482 3895 39855 372420;372421;372422 293973;293974 293974 1 RQDPGDNWEEGGGGGGGMEK Oxidation (M) 2047.829 0.82899487 4980 Q9UKY7 CDV3 Protein CDV3 homolog yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 25.875 23.602 3 6.4994E-05 29770 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 53.342 50.444 24581000 0 12720000 7547100 0 0 0 0 0 0 0 4313400 0 0 0 0 44483 4980 39856 372423;372424;372425 293975;293976;293977 293977 6328 3 RQDPGDNWEEGGGGGGGMEK Unmodified 2031.8341 0.83408024 4980 Q9UKY7 CDV3 Protein CDV3 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.57 3.96 3 4 1 1 1 1 1 1 1 34.237 32.447 3 8.781E-08 35513 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 51.333 50.369 114610000 17331000 10583000 11622000 0 0 0 0 0 0 0 16531000 15524000 0 11921000 31099000 44484 4980 39856 372426;372427;372428;372429;372430;372431;372432 293978;293979;293980;293981;293982;293983;293984;293985;293986;293987;293988 293988 11 RQDSDLVQCGVTSPSSAEATGK Unmodified 2292.0652 0.065202392 4507 Q9HC52 CBX8 Chromobox protein homolog 8 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 42.972 43.109 3 2.2718E-10 48277 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 67.877 60.338 64358000 0 0 0 0 4561700 0 8238400 10221000 6522100 8878700 8993900 0 9503500 7438800 0 44485 4507 39857 372433;372434;372435;372436;372437;372438;372439;372440 293989;293990;293991;293992;293993;293994 293993 5 RQDVDTEPQK Unmodified 1214.5891 0.58912916 2770 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 2 2 2 1 2 1 2 2 1 1 2 6.8538 6.9762 2 0.0091048 5331 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 109.71 48.804 47742000 0 0 0 2534200 3566900 4319800 4217700 2784900 4609500 3520100 5734400 4473600 3872200 3012200 5096500 44486 2770 39858 372441;372442;372443;372444;372445;372446;372447;372448;372449;372450;372451;372452;372453;372454;372455;372456;372457;372458;372459 293995;293996;293997;293998;293999;294000;294001 294000 7 RQEEEEAMRR Unmodified 1332.6204 0.62044606 3120 Q7Z739 YTHDF3 YTH domain-containing family protein 3 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.8562 6.9799 3 0.0014446 3891 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 128.28 113.41 1474600000 0 0 0 49101000 51325000 81633000 103200000 90851000 119510000 187280000 229000000 51957000 153650000 164770000 192370000 44487 3120 39859 372460;372461;372462;372463;372464;372465;372466;372467;372468;372469;372470;372471 294002;294003;294004;294005;294006;294007;294008;294009;294010;294011 294009 7 RQEEEEVDK Unmodified 1160.5309 0.53094558 2255 Q13227 GPS2 G protein pathway suppressor 2 yes yes 0 0 1 By matching By MS/MS 2.33 0.471 2 1 1 2 6.6323 3.2878 2 0.0012659 5354 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.49 90.038 39500000 5649900 33850000 0 0 0 0 0 0 0 0 0 0 0 0 0 44488 2255 39860 372472;372473;372474 294012;294013 294012 2 RQEEEEVVRK Unmodified 1300.6735 0.67352749 4251 Q9BYJ9 YTHDF1 YTH domain-containing family protein 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.47 2 1 14 1 1 1 1 1 1 1 1 1 1 2 1 2 7.6083 7.5956 3 2.6062E-15 5071 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 134.59 102.96 317700000 0 0 7813900 7819200 7296200 10790000 14437000 14318000 17408000 30971000 69736000 28864000 35951000 31221000 41073000 44489 4251 39861 372475;372476;372477;372478;372479;372480;372481;372482;372483;372484;372485;372486;372487;372488;372489 294014;294015;294016;294017;294018;294019;294020;294021;294022;294023;294024;294025;294026 294017 7 RQEELDRGYK Unmodified 1292.6473 0.64731274 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 12.401 11.935 3 0.027939 17950 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.342 61.399 230530000 94893000 0 16003000 0 4094900 8404500 10307000 0 8886700 13618000 0 24464000 13949000 11042000 24864000 44490 5071 39862 372490;372491;372492;372493;372494;372495;372496;372497;372498;372499;372500 294027;294028;294029;294030;294031 294031 0 RQEILSNAGLR Unmodified 1255.6997 0.69968266 678 O95671 ASMTL N-acetylserotonin O-methyltransferase-like protein yes yes 0 0 1 By MS/MS By matching 10 0 2 1 1 39.027 39.419 3 0.049291 44144 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 25.588 11.624 5924600 0 0 0 0 0 3311600 0 0 0 0 0 2613000 0 0 0 44491 678 39863 372501;372502 294032 294032 1 RQELEAELAK Unmodified 1185.6354 0.63535107 2501 Q15149 PLEC Plectin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 2 1 1 1 1 1 1 1 1 1 1 1 33.652 32.913 2;3 0.010924 42436 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 68.355 56.296 175300000 0 15443000 24253000 18047000 9627200 10247000 10862000 12404000 9889400 10886000 11293000 22317000 10929000 9099600 0 44492 2501 39864 372503;372504;372505;372506;372507;372508;372509;372510;372511;372512;372513;372514;372515;372516 294033;294034;294035;294036 294034 2 RQELEQVLGIR Unmodified 1339.7572 0.75719754 3688 Q92925 SMARCD2 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 yes yes 0 0 1 By MS/MS 10 0 1 1 66.873 67.391 3 0.013907 76662 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 26.753 17.559 6094000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6094000 44493 3688 39865 372517 294037 294037 1 RQELESENK Unmodified 1131.552 0.55201537 5006;5204 Q9ULV0;Q9Y4I1 MYO5B;MYO5A Unconventional myosin-Vb;Unconventional myosin-Va no no 0 0 1 By MS/MS 2 0 1 1 6.3041 4.0866 2 0.026854 5843 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 97.635 38.654 4971800 0 0 4971800 0 0 0 0 0 0 0 0 0 0 0 0 44494 5006;5204 39866 372518 294038 294038 1 RQETGREDGGTLAK Unmodified 1516.7594 0.75938238 1420 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 6.9181 7.0245 3 0.0071106 4477 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.444 42.866 80618000 0 0 0 5088700 3188700 5863700 6578700 4598700 5303600 10185000 0 7915900 7381100 7928700 16586000 44495 1420 39867 372519;372520;372521;372522;372523;372524;372525;372526;372527;372528;372529 294039;294040;294041 294039 3 RQEVSQLNK Unmodified 1100.5938 0.5938206 4621 Q9NS87 KIF15 Kinesin-like protein KIF15 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 12.899 9.7688 2 0.024039 14745 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 103.56 22.015 67628000 61677000 0 5951300 0 0 0 0 0 0 0 0 0 0 0 0 44496 4621 39868 372530;372531 294042 294042 1 RQFASQANVVGPWIQTK Unmodified 1929.0221 0.022079431 356 O43707 ACTN4 Alpha-actinin-4 yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 72.3 72.579 3 3.686E-05 82811 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.057 63.96 31170000 0 0 0 0 0 0 0 0 0 0 0 0 0 5705900 25464000 44497 356 39869 372532;372533 294043 294043 1 RQFTELLSDIGFAR Unmodified 1651.8682 0.86820455 2914 Q6P158 DHX57 Putative ATP-dependent RNA helicase DHX57 yes yes 0 0 1 By MS/MS By matching 10 0 2 1 1 46.334 47.076 4 0.041315 52237 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 19.058 7.5844 19902000 0 0 0 0 0 0 0 0 0 0 0 13452000 0 0 6449900 44498 2914 39870 372534;372535 294044 294044 1 RQFVQSAK Unmodified 962.52976 0.52976379 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 8.8342 8.9657 2 0.034426 6826 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 107.59 66.366 92820000 0 0 0 0 5639800 9396400 11739000 4316400 4795200 7654800 0 16999000 5553100 6916400 19809000 44499 5187 39871 372536;372537;372538;372539;372540;372541;372542;372543;372544;372545 294045 294045 0 RQGAQLYVEK Unmodified 1190.6408 0.6407708 5061 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching 8.22 3.33 2 7 2 1 1 1 1 1 1 1 24.553 23.45 2;3 0.00066501 34713 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.355 67.458 208230000 190350000 0 0 0 1140100 2611300 0 1472000 0 3376000 1968200 0 2934700 0 4381900 44500 5061 39872 372546;372547;372548;372549;372550;372551;372552;372553;372554 294046;294047;294048;294049;294050 294049 2 RQGHAEPQP Unmodified 1018.4944 0.49444091 120 O00154 ACOT7 Cytosolic acyl coenzyme A thioester hydrolase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 6.1622 6.2869 2 0.025106 4326 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 91.9 69.408 484170000 0 0 0 88783000 141250000 0 2578800 1886300 1582700 0 123520000 119660000 1211200 1530900 2172000 44501 120 39873 372555;372556;372557;372558;372559;372560;372561;372562;372563;372564 294051;294052;294053 294051 2 RQGISSMQESGPK Oxidation (M) 1419.6776 0.67762659 1242 P29084 GTF2E2 Transcription initiation factor IIE subunit beta yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 9.0746 8.7218 3 0.00035617 7505 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 63.181 55.27 117620000 83743000 0 0 3912300 4302700 2824400 0 0 3228400 3970000 0 7090000 3989100 0 4557600 44502 1242 39874 372565;372566;372567;372568;372569;372570;372571;372572;372573 294054;294055;294056;294057;294058 294054 1837 5 RQGISSMQESGPK Unmodified 1403.6827 0.68271197 1242 P29084 GTF2E2 Transcription initiation factor IIE subunit beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19.854 19.461 3 3.688E-13 19355 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 106.32 98.008 211870000 139880000 0 2003000 4031500 3380700 5944900 3613500 3480900 4166500 9196500 8422000 8796100 5993200 3711700 9245900 44503 1242 39874 372574;372575;372576;372577;372578;372579;372580;372581;372582;372583;372584;372585;372586;372587 294059;294060;294061;294062;294063;294064;294065;294066;294067;294068;294069;294070;294071 294065 13 RQGIVQSDPPIPVDR Unmodified 1675.9006 0.90056731 4760 Q9NZ52 GGA3 ADP-ribosylation factor-binding protein GGA3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 55.592 55.652 3 0.01988 63057 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 26.781 13.363 30411000 0 0 0 0 3137200 6721500 6382100 3504000 0 5362700 5303900 0 0 0 0 44504 4760 39875 372588;372589;372590;372591;372592;372593 294072;294073;294074;294075;294076 294073 5 RQGLEQFINK Unmodified 1231.6673 0.6673199 5022 Q9UMY4 SNX12 Sorting nexin-12 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 48.136 48.492 3 0.00088645 53990 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.943 34.225 107460000 0 0 0 0 0 0 9986100 0 5264200 11568000 12753000 17088000 8221700 12330000 30254000 44505 5022 39876 372594;372595;372596;372597;372598;372599;372600;372601;372602 294077;294078;294079;294080;294081;294082;294083;294084;294085;294086 294086 10 RQGRCDTYATEFDLEAEEYVPLPK Unmodified 2886.3494 0.34942274 5086 Q9Y265 RUVBL1 RuvB-like 1 yes yes 0 0 2 By MS/MS 2.5 0.5 1 1 2 89.25 83.4 4 8.5256E-47 106881 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 122 115.93 39037000 39037000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44506 5086 39877 372603;372604 294087;294088;294089;294090;294091 294089 5 RQGSFSEDVISHK Unmodified 1488.7321 0.732105 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 1 By matching By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 31.651 31.848 3 0.0013053 34880 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 38.399 23.838 29026000 0 0 0 3919400 0 6311200 0 0 0 0 0 12240000 3769500 2785900 0 44507 5049 39878 372605;372606;372607;372608;372609 294092;294093;294094 294092 2 RQGYGEGFR Unmodified 1068.5101 0.51009098 4589;5274 Q9NR31;Q9Y6B6 SAR1A;SAR1B GTP-binding protein SAR1a;GTP-binding protein SAR1b no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 17.992 18.287 2 0.026026 17143 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 113.18 54.58 383750000 0 0 0 0 0 26336000 0 32610000 21627000 50391000 46790000 42006000 41239000 35108000 87643000 44508 4589;5274 39879 372610;372611;372612;372613;372614;372615;372616;372617;372618 294095;294096;294097;294098;294099 294096 1 RQHEEPESFFTWFTDHSDAGADELGEVIK Unmodified 3376.5273 0.52726377 2049 Q01105 SET Protein SET yes yes 0 0 1 By MS/MS 2 0 2 2 97.911 89.781 4;5 2.1467E-09 115853 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.083 58.926 58998000 58998000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44509 2049 39880 372619;372620 294100;294101 294100 1 RQIIVEEAK Unmodified 1084.6241 0.6240581 5088 Q9Y281 CFL2 Cofilin-2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.4 3.77 2 1 2 1 1 1 1 1 26.489 24.052 2 3.9457E-07 35141 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 181.55 52.941 1633300000 1425900000 8599800 136740000 0 0 0 0 0 0 0 0 0 0 8277400 53822000 44510 5088 39881 372621;372622;372623;372624;372625 294102;294103;294104;294105;294106;294107 294106 5 RQILLQEEK Unmodified 1155.6612 0.66117189 1739 P54278 PMS2 Mismatch repair endonuclease PMS2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 30.803 30.03 2;3 0.0076288 45022 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.047 65.694 274330000 144330000 0 0 5363000 6485400 6958700 7929900 8042600 5886400 10474000 9670300 20218000 8952500 9763200 30266000 44511 1739 39882 372626;372627;372628;372629;372630;372631;372632;372633;372634;372635;372636;372637;372638;372639 294108;294109;294110 294108 1 RQIMEECENLK Unmodified 1448.6752 0.67518375 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 1 1 1 2 1 1 1 2 2 2 1 31.735 31.971 2;3 8.3465E-05 35374 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 78.692 68.64 178580000 0 0 0 7791200 11224000 10849000 16073000 22583000 14226000 13314000 9862900 28733000 12841000 16368000 14717000 44512 2556 39883 372640;372641;372642;372643;372644;372645;372646;372647;372648;372649;372650;372651;372652;372653;372654;372655 294111;294112;294113;294114;294115;294116;294117;294118;294119;294120;294121;294122;294123;294124;294125;294126 294126 16 RQIMEECENLK Oxidation (M) 1464.6701 0.67009837 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 2 1 1 1 1 1 1 1 1 20.317 20.502 3 0.00044746 21072 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 70.488 55.101 130000000 0 0 0 11718000 12281000 0 12440000 10329000 0 18809000 10607000 0 21297000 16143000 16378000 44513 2556 39883 372656;372657;372658;372659;372660;372661;372662;372663;372664;372665;372666;372667 294127;294128;294129;294130;294131;294132;294133;294134;294135;294136;294137;294138 294129 4205 12 RQITIEEGEQR Unmodified 1357.695 0.69499121 4611 Q9NRW1 RAB6B Ras-related protein Rab-6B yes yes 0 0 1 By MS/MS By matching By MS/MS By matching 10 0 4 1 1 1 1 8.2266 8.3945 3 0.013156 6778 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 30.331 6.6075 171900000 0 0 0 26892000 0 0 0 0 0 0 7779200 135760000 0 1474900 0 44514 4611 39884 372668;372669;372670;372671 294139;294140 294139 2 RQIVDLDTK Unmodified 1086.6033 0.60332266 4643 Q9NUG6 PDRG1 p53 and DNA damage-regulated protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 4 3.46 3 1 1 1 1 1 38.865 35.227 2 0.0017801 44519 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 124.23 61.513 221700000 173040000 13313000 17115000 0 0 0 0 0 0 0 0 0 0 0 18234000 44515 4643 39885 372672;372673;372674;372675 294141;294142;294143 294143 2 RQLAALGQTEPLPAEAPWAR Unmodified 2174.1596 0.15963555 3693 Q92974 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 79.445 79.592 3 1.4656E-05 91674 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.012 30.606 54100000 0 0 0 0 0 6204300 1686200 5337500 4460700 7816700 5792300 6407300 0 3197500 13197000 44516 3693 39886 372676;372677;372678;372679;372680;372681;372682;372683;372684 294144;294145;294146;294147;294148;294149;294150;294151 294146 8 RQLDNIVGER Unmodified 1198.6418 0.64183343 779 P04259 KRT6B Keratin, type II cytoskeletal 6B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 2 1 1 2 2 1 2 2 2 33.747 33.86 2;3 0.00086319 37877 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 64.906 54.261 124960000 0 0 0 24115000 2731500 2750500 8824600 14347000 1351300 6641300 0 9893600 54301000 0 0 44517 779 39887 372685;372686;372687;372688;372689;372690;372691;372692;372693;372694;372695;372696;372697;372698;372699 294152;294153;294154;294155;294156;294157 294154 5 RQLDSIVGER Unmodified 1171.6309 0.63093439 74;66;58 CON__P13647;P13647;CON__P02538;P02538;CON__P04259 KRT5;KRT6A Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 6A no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 26 2 2 2 2 3 2 2 2 2 2 3 2 35.419 35.605 2;3 0.0027016 40066 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 99.568 55.251 + 1320900000 0 0 0 267380000 52532000 60444000 69523000 154630000 48737000 121200000 78984000 118590000 212200000 71139000 65537000 44518 74;58;66 39888 372700;372701;372702;372703;372704;372705;372706;372707;372708;372709;372710;372711;372712;372713;372714;372715;372716;372717;372718;372719;372720;372721;372722;372723;372724;372725 294158;294159;294160;294161;294162;294163;294164;294165;294166;294167;294168;294169;294170;294171;294172;294173 294171 8 RQLDTETNLHLNTK Unmodified 1681.8747 0.87474649 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 4 2 22 4 1 1 2 2 2 2 1 2 2 2 2 2 2 1 39.817 38.669 2;3;4 4.8596E-49 55768 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 186.05 171.97 1019800000 522930000 32111000 14647000 15022000 14701000 32763000 29293000 26927000 32400000 49787000 56259000 65012000 55794000 58550000 13557000 44519 965 39889 372726;372727;372728;372729;372730;372731;372732;372733;372734;372735;372736;372737;372738;372739;372740;372741;372742;372743;372744;372745;372746;372747;372748;372749;372750;372751;372752;372753 294174;294175;294176;294177;294178;294179;294180;294181;294182;294183;294184;294185;294186;294187;294188;294189;294190;294191;294192;294193;294194;294195;294196;294197;294198;294199;294200;294201 294187 24 RQLEDGDQPESK Unmodified 1400.6532 0.65318598 3690 Q92945 KHSRP Far upstream element-binding protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.96 2.67 5 1 39 2 2 2 2 3 4 4 3 4 3 1 4 3 3 5 9.2974 8.9784 2;3 2.9899E-55 6153 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 155.88 138.72 1313200000 66599000 201140000 37662000 68509000 53797000 52942000 76157000 43251000 47295000 56413000 112120000 170990000 79615000 65421000 181330000 44520 3690 39890 372754;372755;372756;372757;372758;372759;372760;372761;372762;372763;372764;372765;372766;372767;372768;372769;372770;372771;372772;372773;372774;372775;372776;372777;372778;372779;372780;372781;372782;372783;372784;372785;372786;372787;372788;372789;372790;372791;372792;372793;372794;372795;372796;372797;372798 294202;294203;294204;294205;294206;294207;294208;294209;294210;294211;294212;294213;294214;294215;294216;294217;294218;294219;294220;294221;294222;294223;294224 294212 13 RQLEDGDQPESKK Unmodified 1528.7481 0.74814899 3690 Q92945 KHSRP Far upstream element-binding protein 2 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 6.9396 6.6123 3 1.4523E-12 4234 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 120.59 108.44 235530000 6647100 0 40192000 0 12496000 3295100 16879000 11114000 8020600 16418000 29657000 20981000 20562000 18899000 30372000 44521 3690 39891 372799;372800;372801;372802;372803;372804;372805;372806;372807;372808;372809;372810;372811 294225;294226;294227;294228;294229;294230;294231;294232;294233;294234;294235 294227 10 RQLEEAEEEAQR Unmodified 1486.7012 0.7011988 1356 P35579 MYH9 Myosin-9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 25 2 2 2 2 2 2 2 2 2 2 2 3 20.45 20.67 2;3 4.9286E-23 20925 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 149.41 134.38 5026100000 0 0 0 339770000 373110000 526580000 236280000 375760000 295950000 401850000 503930000 863180000 441470000 239380000 428820000 44522 1356 39892 372812;372813;372814;372815;372816;372817;372818;372819;372820;372821;372822;372823;372824;372825;372826;372827;372828;372829;372830;372831;372832;372833;372834;372835;372836 294236;294237;294238;294239;294240;294241;294242;294243;294244;294245;294246;294247;294248;294249;294250;294251;294252;294253;294254;294255;294256;294257;294258;294259;294260;294261;294262;294263 294249 26 RQLEEAEEEAQRANASR Unmodified 1985.9515 0.95149326 1356 P35579 MYH9 Myosin-9 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 2 14 1 1 1 1 1 1 1 1 1 1 1 2 1 2 33.787 33.365 3;4 7.3698E-82 36418 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 183.74 151.46 5358700000 70141000 0 15897000 295220000 129100000 302570000 227830000 228010000 303740000 535150000 790730000 841150000 483820000 316600000 818710000 44523 1356 39893 372837;372838;372839;372840;372841;372842;372843;372844;372845;372846;372847;372848;372849;372850;372851;372852 294264;294265;294266;294267;294268;294269;294270;294271;294272;294273;294274;294275;294276;294277;294278;294279;294280;294281;294282;294283;294284;294285 294264 19 RQLEEAEEEASR Unmodified 1445.6746 0.6746497 3090 Q7Z406 MYH14 Myosin-14 yes yes 0 0 1 By MS/MS 10 0 1 1 20.213 20.067 3 0.0064134 20704 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 40.751 32.437 6140100 0 0 0 6140100 0 0 0 0 0 0 0 0 0 0 0 44524 3090 39894 372853 294286 294286 1 RQLEEQEEALR Unmodified 1399.7056 0.7055559 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 2 2 2 2 2 2 27.437 27.64 2;3 0.0002366 29081 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 77.597 64.412 358230000 0 0 0 24120000 17641000 34757000 20580000 26348000 0 31542000 45300000 53687000 28112000 34418000 41722000 44525 4139 39895 372854;372855;372856;372857;372858;372859;372860;372861;372862;372863;372864;372865;372866;372867;372868;372869;372870;372871;372872;372873;372874;372875 294287;294288;294289;294290;294291;294292;294293;294294;294295;294296;294297;294298 294294 7 RQLEEQEEALRQQR Unmodified 1811.9238 0.92382195 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.14 28.335 3 2.4595E-15 29924 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 121.18 102.35 191580000 0 0 0 12055000 6472600 17074000 10364000 14841000 12526000 20699000 23031000 28270000 13118000 10855000 22272000 44526 4139 39896 372876;372877;372878;372879;372880;372881;372882;372883;372884;372885;372886;372887 294299;294300;294301;294302;294303 294303 3 RQLEESVDALSEELVQLRAQEK Unmodified 2569.3348 0.33475896 1328 P33176 KIF5B Kinesin-1 heavy chain yes yes 0 0 2 By MS/MS By MS/MS 2.67 0.471 1 2 2 1 90.989 86.029 4 0.0064694 103987 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 29.447 26.032 31548000 28687000 2860900 0 0 0 0 0 0 0 0 0 0 0 0 0 44527 1328 39897 372888;372889;372890 294304;294305;294306 294304 3 RQLENMEANVK Oxidation (M) 1346.6612 0.66124824 412 O60563 CCNT1 Cyclin-T1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 13.035 12.546 3 0.0018892 10932 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.237 41.074 92848000 22072000 0 17865000 4329100 0 6676000 0 0 4975100 7110100 5546300 11984000 0 5619600 6671000 44528 412 39898 372891;372892;372893;372894;372895;372896;372897;372898;372899;372900 294307;294308;294309;294310 294308 513 2 RQLENMEANVK Unmodified 1330.6663 0.66633362 412 O60563 CCNT1 Cyclin-T1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.81 2.84 4 23 2 2 2 2 1 2 2 2 2 2 2 2 2 2 28.124 27.598 2;3 0.0027081 28293 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.48 71.75 340770000 108300000 0 12868000 9824000 7686500 6967300 10631000 15058000 12366000 18173000 25773000 27868000 20628000 20581000 44044000 44529 412 39898 372901;372902;372903;372904;372905;372906;372907;372908;372909;372910;372911;372912;372913;372914;372915;372916;372917;372918;372919;372920;372921;372922;372923;372924;372925;372926;372927 294311;294312;294313;294314;294315;294316;294317;294318 294311 6 RQLETLGQEK Unmodified 1200.6463 0.64625011 67;51 CON__H-INV:HIT000292931;CON__P05787;P05787;CON__Q9H552 KRT8 Keratin, type II cytoskeletal 8 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 1 2 2 2 2 1 2 2 2 1 2 20.409 20.629 2;3 0.0014645 21198 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 72.434 45.727 + 904010000 0 0 0 54581000 33806000 67336000 55235000 92382000 35841000 48811000 114860000 139700000 101260000 50611000 109590000 44530 51;67 39899 372928;372929;372930;372931;372932;372933;372934;372935;372936;372937;372938;372939;372940;372941;372942;372943;372944;372945;372946;372947;372948 294319;294320;294321;294322;294323;294324;294325;294326;294327;294328;294329;294330;294331 294327 5 RQLQEDQENNLQDNQTSNSSPCR Unmodified 2760.2118 0.21176006 3631 Q92576 PHF3 PHD finger protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 2 1 1 1 1 1 27.63 27.886 3 6.0512E-67 29726 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 120.64 113.53 44982000 0 0 0 0 4144700 0 5196600 0 5535300 8418800 6699900 7434700 0 0 7551800 44531 3631 39900 372949;372950;372951;372952;372953;372954;372955;372956;372957;372958 294332;294333;294334;294335;294336;294337;294338;294339;294340;294341;294342;294343 294338 12 RQLQEDQENNLQDNQTSNSSPCRSNVGK Unmodified 3245.4716 0.47155658 3631 Q92576 PHF3 PHD finger protein 3 yes yes 0 0 2 By MS/MS 2 0 1 1 33.257 27.22 4 1.6865E-34 38183 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.565 96.158 10071000 10071000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44532 3631 39901 372959 294344;294345 294345 2 RQLQQLQEGTLQEYQK Unmodified 1989.028 0.02795267 4435 Q9H7L9 SUDS3 Sin3 histone deacetylase corepressor complex component SDS3 yes yes 0 0 1 By MS/MS 2 0 2 2 59.785 51.559 2;3 2.3257E-15 70055 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 115.57 92.199 85134000 85134000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44533 4435 39902 372960;372961 294346;294347;294348;294349 294348 4 RQLSLDINK Unmodified 1085.6193 0.61930707 441;1189 O60885;P25440 BRD4;BRD2 Bromodomain-containing protein 4;Bromodomain-containing protein 2 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 40.256 40.495 2 0.025045 45094 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 91.853 37.696 160440000 0 0 0 5298400 0 15998000 10383000 7088100 13591000 18832000 15009000 21394000 18398000 14916000 19533000 44534 441;1189 39903 372962;372963;372964;372965;372966;372967;372968;372969;372970;372971;372972 294350 294350 1 RQLSSSSGNTDTQADEDER Unmodified 2094.905 0.90499658 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 0 1 By MS/MS 10 0 1 1 12.899 13.306 3 0.030157 11848 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 20.743 16.775 2557200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2557200 44535 1286 39904 372973 294351 294351 1 RQLVDYEEK Unmodified 1178.5932 0.5931519 2805 Q5VIR6 VPS53 Vacuolar protein sorting-associated protein 53 homolog yes yes 0 0 1 By MS/MS By matching By matching By matching By MS/MS 7.33 3.77 2 4 2 1 1 1 1 28.464 27.415 2;3 0.011185 35166 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 70.028 45.998 25608000 0 0 14238000 0 1953000 0 2477700 0 3552200 0 0 0 0 3387500 0 44536 2805 39905 372974;372975;372976;372977;372978;372979 294352;294353;294354 294352 1 RQLYEFDIK Unmodified 1210.6346 0.63462279 1024 P15586 GNS N-acetylglucosamine-6-sulfatase yes yes 0 0 1 By MS/MS 2 0 1 1 72.279 64.04 2 0.0268 85084 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.431 55.322 11670000 11670000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44537 1024 39906 372980 294355 294355 1 RQLYMVSK Unmodified 1023.5535 0.55353569 2168 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 27.971 28.135 2 0.0078072 29088 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 127.46 76.496 219630000 0 0 0 10197000 11262000 28745000 0 11890000 13999000 20923000 33504000 0 22688000 24379000 42045000 44538 2168 39907 372981;372982;372983;372984;372985;372986;372987;372988;372989;372990 294356 294356 0 RQMSVPGIFNPHEIPEEMCD 2 Oxidation (M) 2417.045 0.045000997 237 O14980 XPO1 Exportin-1 yes yes 0 2 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 74.243 73.61 3 4.141E-38 84957 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 109.71 108.07 210620000 62108000 0 0 0 6355000 27582000 5241100 10488000 0 22207000 11221000 12976000 9241600 13906000 29299000 44539 237 39908 372991;372992;372993;372994;372995;372996;372997;372998;372999;373000;373001 294357;294358;294359;294360;294361;294362;294363;294364;294365;294366;294367;294368;294369;294370 294358 321;322 14 RQMSVPGIFNPHEIPEEMCD Oxidation (M) 2401.0501 0.050086375 237 O14980 XPO1 Exportin-1 yes yes 0 1 1 By MS/MS 2 0 2 2 84.475 76.345 3 7.9174E-09 99285 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.589 73.285 83782000 83782000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44540 237 39908 373002;373003 294371;294372 294371 321;322 2 RQMSVPGIFNPHEIPEEMCD Unmodified 2385.0552 0.055171752 237 O14980 XPO1 Exportin-1 yes yes 0 0 1 By MS/MS 2 0 1 1 88.464 80.334 3 9.1212E-18 104469 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.088 77.09 18340000 18340000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44541 237 39908 373004 294373 294373 1 RQNALLEQQVR Unmodified 1353.7477 0.74769548 1841 P61244 MAX Protein max yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 32.645 32.882 3 0.0019085 34436 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.836 49.429 178460000 0 0 0 0 9216800 13009000 14033000 14706000 10864000 17970000 19989000 25755000 15506000 15958000 21457000 44542 1841 39909 373005;373006;373007;373008;373009;373010;373011;373012;373013;373014;373015 294374;294375;294376;294377;294378;294379 294375 1 RQNEDIEPTSSR Unmodified 1430.675 0.67498405 4693 Q9NW82 WDR70 WD repeat-containing protein 70 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 1 2 2 2 2 2 2 2 2 2 2 13.445 13.618 2;3 0.00012236 12882 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 66.989 53.399 180000000 0 0 0 10224000 1839300 8330000 12236000 10239000 9579900 18671000 22529000 19605000 21560000 17967000 27223000 44543 4693 39910 373016;373017;373018;373019;373020;373021;373022;373023;373024;373025;373026;373027;373028;373029;373030;373031;373032;373033;373034;373035;373036;373037;373038 294380;294381;294382;294383;294384;294385;294386;294387;294388;294389;294390;294391 294381 10 RQNELRQEMLDDVQK Oxidation (M) 1916.9374 0.9374231 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 1 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 13 1 2 1 1 1 1 1 2 1 1 1 29.433 29.687 3 0.0011928 32581 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 63.037 40.562 90931000 0 0 0 0 2171200 7416900 5532500 5152700 5731100 5217000 6189600 20144000 11276000 4057200 18043000 44544 2556 39911 373039;373040;373041;373042;373043;373044;373045;373046;373047;373048;373049;373050;373051 294392;294393;294394;294395;294396 294393 4206 4 RQNHPESGEVTVR Unmodified 1507.7492 0.74915205 2171 Q09472 EP300 Histone acetyltransferase p300 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 11.707 11.809 3 0.0054397 10740 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 37.594 27.542 54938000 0 0 0 3439000 2094600 3675000 5063300 5811500 4963000 7382500 5283000 0 9399200 7827000 0 44545 2171 39912 373052;373053;373054;373055;373056;373057;373058;373059;373060;373061 294397;294398;294399;294400;294401;294402;294403 294401 6 RQNLDEILQQHK Unmodified 1520.8059 0.80593865 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 45.105 45.498 3 1.1849E-05 49679 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.34 54.769 87519000 0 0 0 0 0 10034000 0 7301000 0 0 7806200 10895000 12264000 10887000 28333000 44546 5262 39913 373062;373063;373064;373065;373066;373067;373068 294404;294405;294406;294407 294406 4 RQNMDLLEK Unmodified 1145.5863 0.58629239 398 O60343 TBC1D4 TBC1 domain family member 4 yes yes 0 0 1 By MS/MS 2 0 1 1 44.453 37.587 2 0.031513 51426 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.948 33.272 51523000 51523000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44547 398 39914 373069 294408 294408 1 RQNMDLLEK Oxidation (M) 1161.5812 0.58120701 398 O60343 TBC1D4 TBC1 domain family member 4 yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 23.814 19.842 2 0.024841 28225 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.334 17.745 34140000 26162000 0 7977800 0 0 0 0 0 0 0 0 0 0 0 0 44548 398 39914 373070;373071 294409 294409 0 RQNQLHPSSAQSR Unmodified 1507.7604 0.76038544 1181 P25054 APC Adenomatous polyposis coli protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.3592 6.4849 3 0.012209 4693 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 25.718 11.46 53602000 0 0 0 3185100 3063700 3543400 4969900 2768000 5116500 3856500 5320700 5688800 4812700 5050200 6226500 44549 1181 39915 373072;373073;373074;373075;373076;373077;373078;373079;373080;373081;373082;373083 294410;294411;294412;294413 294411 4 RQNSSDSISSLNSITSHSSIGSSK Unmodified 2478.1946 0.19463666 3432 Q8NEY1 NAV1 Neuron navigator 1 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 16 1 1 2 2 2 1 1 2 2 2 55.08 55.321 3;4 1.8948E-08 61975 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.481 40.679 94281000 0 0 0 0 1177200 4948700 10633000 11875000 7114400 6762100 4865900 18124000 0 10397000 18385000 44550 3432 39916 373084;373085;373086;373087;373088;373089;373090;373091;373092;373093;373094;373095;373096;373097;373098;373099 294414;294415;294416;294417;294418;294419;294420;294421;294422;294423;294424;294425 294418 10 RQPEAVHLLDK Unmodified 1304.7201 0.72008375 3643 Q92621 NUP205 Nuclear pore complex protein Nup205 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 36.686 36.879 3 0.0061109 40745 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 34.898 17.304 80667000 0 0 0 4401300 0 9988300 5964500 8492700 6628400 0 8512900 18696000 9788400 8194600 0 44551 3643 39917 373100;373101;373102;373103;373104;373105;373106;373107;373108 294426;294427 294426 2 RQPILDAMDAK Unmodified 1256.6547 0.6547063 2250 Q13188 STK3 Serine/threonine-protein kinase 3;Serine/threonine-protein kinase 3 36kDa subunit;Serine/threonine-protein kinase 3 20kDa subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 7.71 3.61 2 5 2 1 1 1 1 1 51.233 48.967 2;3 0.0015248 68892 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 103.08 73.913 92613000 68185000 0 0 0 2936100 4967800 0 3493800 0 5198300 0 0 0 0 7832800 44552 2250 39918 373109;373110;373111;373112;373113;373114;373115 294428;294429;294430 294429 2 RQPILDAMDAK Oxidation (M) 1272.6496 0.64962092 2250 Q13188 STK3 Serine/threonine-protein kinase 3;Serine/threonine-protein kinase 3 36kDa subunit;Serine/threonine-protein kinase 3 20kDa subunit yes yes 0 1 1 By MS/MS By matching 2 0 3 2 1 34.697 29.374 2 0.016822 41581 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.338 54.954 58211000 56508000 0 1703100 0 0 0 0 0 0 0 0 0 0 0 0 44553 2250 39918 373116;373117;373118 294431;294432 294432 3655 2 RQPPARPPGPSTDTGALADGVVSQAVK Unmodified 2671.4042 0.40417593 3686 Q92917 GPKOW G patch domain and KOW motifs-containing protein yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 1 2 2 2 2 2 2 2 2 65.993 66.147 3;4 6.1924E-38 75596 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 82.077 75.428 496810000 0 0 0 0 17721000 35762000 17780000 27996000 30714000 54753000 69127000 65053000 33748000 42228000 101930000 44554 3686 39919 373119;373120;373121;373122;373123;373124;373125;373126;373127;373128;373129;373130;373131;373132;373133;373134;373135;373136;373137;373138;373139 294433;294434;294435;294436;294437;294438;294439;294440;294441;294442;294443;294444;294445;294446;294447 294445 14 RQPPVSPLTLSPGPEAHQGFSR Unmodified 2357.224 0.22402672 2975 Q6UUV7 CRTC3 CREB-regulated transcription coactivator 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 2 66.285 66.527 3;4 9.2299E-14 75367 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.293 49.671 121010000 0 0 0 0 0 11069000 4642900 4018300 8949600 11966000 0 16611000 10621000 7945100 45186000 44555 2975 39920 373140;373141;373142;373143;373144;373145;373146;373147;373148;373149 294448;294449;294450;294451;294452;294453;294454;294455;294456;294457;294458;294459;294460;294461 294452 14 RQPQEEVVHEDQGK Unmodified 1677.8071 0.80706086 3573 Q8WWI1 LMO7 LIM domain only protein 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 13.897 14.06 3;4 2.3607E-19 13259 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 126.48 113.65 333050000 0 0 0 18548000 21594000 19778000 17828000 13640000 11828000 37011000 35124000 47875000 31041000 29564000 49215000 44556 3573 39921 373150;373151;373152;373153;373154;373155;373156;373157;373158;373159;373160;373161;373162;373163;373164;373165;373166;373167;373168;373169;373170;373171;373172;373173 294462;294463;294464;294465;294466;294467;294468;294469;294470;294471;294472;294473;294474;294475;294476;294477;294478;294479;294480;294481;294482;294483;294484 294464 17 RQPVLDFESGHK Unmodified 1411.7208 0.72081203 2791 Q5TAQ9 DCAF8 DDB1- and CUL4-associated factor 8 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 38.316 38.529 3 0.0019997 42471 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 38.674 30.763 51911000 0 0 0 3783700 0 0 4496800 0 3418100 4603800 11071000 12216000 6006300 6315400 0 44557 2791 39922 373174;373175;373176;373177;373178;373179;373180;373181 294485;294486;294487;294488;294489 294486 5 RQPVVCTGGSPSIK Unmodified 1484.7769 0.7769467 1739 P54278 PMS2 Mismatch repair endonuclease PMS2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 32.787 32.411 3 0.0058196 45849 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.532 32.845 78095000 11901000 0 0 4530000 3849800 6252700 3984000 5537500 0 4031800 7362500 8631600 9411400 4881900 7720700 44558 1739 39923 373182;373183;373184;373185;373186;373187;373188;373189;373190;373191;373192;373193 294490;294491;294492;294493;294494;294495;294496;294497;294498;294499;294500 294495 11 RQQAMPSTGMAEQSK Unmodified 1648.7661 0.76612402 3915 Q96L91 EP400 E1A-binding protein p400 yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching 8.86 2.8 1 6 1 1 1 1 1 1 1 24.183 24.488 2;3 0.020201 25789 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 16.357 6.8204 25374000 0 0 0 0 2532600 0 0 0 0 4232600 0 3756900 5260600 4768300 4823300 44559 3915 39924 373194;373195;373196;373197;373198;373199;373200 294501;294502;294503 294503 3 RQQAMPSTGMAEQSK Oxidation (M) 1664.761 0.76103864 3915 Q96L91 EP400 E1A-binding protein p400 yes yes 0 1 1 By MS/MS 2 0 1 1 16.693 12.483 3 0.0087675 18322 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.823 45.232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44560 3915 39924 373201 294504 294504 5415 1 RQQEEEAAAQMK Unmodified 1417.662 0.66197652 4490 Q9HAU5 UPF2 Regulator of nonsense transcripts 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 13.196 13.083 3 0.0032626 11524 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 46.88 38.992 66015000 0 15425000 0 2586300 2407500 3638100 4111700 2299900 3176200 5240700 4740900 5511900 6935000 3812100 6129700 44561 4490 39925 373202;373203;373204;373205;373206;373207;373208;373209;373210;373211;373212;373213;373214 294505;294506;294507;294508;294509;294510;294511;294512;294513;294514;294515 294511 9 RQQEEEAAAQMK Oxidation (M) 1433.6569 0.65689115 4490 Q9HAU5 UPF2 Regulator of nonsense transcripts 2 yes yes 0 1 1 By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 6.1251 6.0445 3 0.00023316 3914 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 72.089 69.38 57138000 0 0 7161900 3242400 2710000 4374900 5140600 0 3363500 5131200 6062400 6297600 4381600 3967500 5304600 44562 4490 39925 373215;373216;373217;373218;373219;373220;373221;373222;373223;373224;373225;373226 294516;294517;294518;294519;294520 294516 5918 5 RQQEEILRR Unmodified 1226.6844 0.68436695 2994 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 14.274 14.483 3 0.039811 13004 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.379 49.517 80463000 0 0 0 0 0 8552100 7191800 0 5633300 7971000 9028300 0 16072000 8346600 17667000 44563 2994 39926 373227;373228;373229;373230;373231;373232;373233;373234 294521 294521 1 RQQEEMMRR Unmodified 1262.5972 0.5972082 2508 Q15233 NONO Non-POU domain-containing octamer-binding protein yes yes 0 0 2 By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.3097 7.432 3 0.026232 4883 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 128.38 96.623 105280000 0 0 0 4529600 3363100 4027000 7090000 5944400 4337500 8801100 24337000 10521000 6507800 8055700 17768000 44564 2508 39927 373235;373236;373237;373238;373239;373240;373241;373242;373243;373244;373245;373246 294522;294523 294522 2 RQQEQQVPILEK Unmodified 1494.8154 0.8154407 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 41.676 41.853 2;3 1.3549E-08 45161 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 106.79 99.746 1120600000 0 0 0 51794000 39607000 159750000 50694000 52147000 39300000 114730000 108400000 117700000 82186000 76967000 227340000 44565 1565 39928 373247;373248;373249;373250;373251;373252;373253;373254;373255;373256;373257;373258;373259;373260;373261;373262;373263;373264;373265;373266;373267;373268;373269;373270 294524;294525;294526;294527;294528;294529;294530;294531;294532;294533;294534;294535;294536;294537;294538;294539;294540;294541;294542;294543;294544;294545;294546;294547 294529 18 RQQEVETELK Unmodified 1258.6517 0.65172941 868 P08621 SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 1 2 2 2 2 19.288 19.47 2;3 1.1286E-06 20200 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 137.05 57.333 519400000 0 0 0 31584000 28748000 26263000 41511000 33239000 33546000 61195000 26538000 76080000 40341000 39492000 80858000 44566 868 39929 373271;373272;373273;373274;373275;373276;373277;373278;373279;373280;373281;373282;373283;373284;373285;373286;373287;373288;373289;373290;373291;373292;373293 294548;294549;294550;294551;294552;294553;294554;294555;294556;294557;294558;294559;294560;294561;294562;294563 294563 8 RQQLELDDELK Unmodified 1385.7151 0.71505795 2408 Q14457 BECN1 Beclin-1 yes yes 0 0 1 By MS/MS 10 0 1 1 49.023 49.746 3 0.049707 55203 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 34.75 28.134 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44567 2408 39930 373294 294564 294564 1 RQQPGPSEHIER Unmodified 1432.7171 0.71712364 1629 P50552 VASP Vasodilator-stimulated phosphoprotein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 12.417 12.536 3 0.00048816 11889 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 67.234 39.268 150210000 0 0 0 9404000 10490000 13933000 10051000 8083200 10238000 25439000 0 15341000 11644000 10469000 25116000 44568 1629 39931 373295;373296;373297;373298;373299;373300;373301;373302;373303;373304;373305 294565;294566;294567;294568;294569;294570;294571;294572;294573;294574;294575;294576;294577 294566 13 RQQPGPSEHIERR Unmodified 1588.8182 0.81823467 1629 P50552 VASP Vasodilator-stimulated phosphoprotein yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 2 1 2 1 1 1 1 1 9.3113 9.5058 4 0.0029841 6994 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.705 60.539 156330000 0 0 0 0 0 17410000 0 12725000 13841000 8913500 28157000 27962000 13406000 10529000 23385000 44569 1629 39932 373306;373307;373308;373309;373310;373311;373312;373313;373314;373315;373316 294578;294579;294580;294581;294582;294583;294584;294585 294579 4 RQQQAATSESSQSEASVR Unmodified 1948.9199 0.91985878 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 11.165 11.305 3 2.844E-62 10505 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 140.28 130.22 114270000 0 0 0 7552800 3465000 10377000 5766700 6428700 5448400 9028900 10238000 14966000 12292000 11366000 17336000 44570 3119 39933 373317;373318;373319;373320;373321;373322;373323;373324;373325;373326;373327;373328 294586;294587;294588;294589;294590;294591;294592;294593;294594;294595;294596;294597;294598 294595 13 RQQQLAGNGAPFEESLAPLQER Unmodified 2438.2302 0.23023431 1449 P42226 STAT6 Signal transducer and activator of transcription 6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.088 76.196 3 2.488E-20 87489 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.518 72.063 108210000 0 0 0 0 4552400 12445000 6014100 7082500 6237900 13266000 6849000 11981000 5383200 8273800 26124000 44571 1449 39934 373329;373330;373331;373332;373333;373334;373335;373336;373337;373338;373339 294599;294600;294601;294602;294603;294604;294605;294606;294607 294602 9 RQQQLTAMK Unmodified 1102.5917 0.59171211 1356;1366 P35579;P35749 MYH9;MYH11 Myosin-9;Myosin-11 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 14.787 14.573 2 0.0029429 13702 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 128.86 84.463 2178500000 109790000 0 0 119260000 129080000 156200000 108050000 179070000 88755000 168950000 243170000 261870000 200450000 162540000 251300000 44572 1356;1366 39935 373340;373341;373342;373343;373344;373345;373346;373347;373348;373349;373350;373351;373352 294608;294609;294610;294611;294612;294613;294614;294615;294616;294617;294618;294619 294619 10 RQQQLTAMK Oxidation (M) 1118.5866 0.58662674 1356;1366 P35579;P35749 MYH9;MYH11 Myosin-9;Myosin-11 no no 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6.9789 6.4708 2 0.021525 9100 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.743 32.889 2128400000 265150000 6317200 15446000 98935000 145530000 138440000 162830000 105610000 118590000 203770000 192460000 213280000 169840000 149690000 142470000 44573 1356;1366 39935 373353;373354;373355;373356;373357;373358;373359;373360;373361;373362;373363;373364;373365;373366;373367 294620;294621;294622;294623;294624 294622 2093 0 RQQQQDSIDPSSR Unmodified 1543.7339 0.73389591 3436 Q8NEZ4 KMT2C Histone-lysine N-methyltransferase 2C yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 13.17 13.308 3 0.0023303 12787 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 45.992 36.798 20013000 0 0 0 1827100 1164400 1515500 0 1326400 1202600 3629100 0 2724700 1760900 1982600 2879300 44574 3436 39936 373368;373369;373370;373371;373372;373373;373374;373375;373376;373377 294625 294625 1 RQREEEIEAQEK Unmodified 1543.759 0.75904803 562 O75937 DNAJC8 DnaJ homolog subfamily C member 8 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.52 3.05 3 1 17 2 1 1 1 1 2 2 2 2 2 1 1 1 2 10.905 10.352 3;4 4.1964E-07 8059 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 102.62 58.321 317460000 176520000 8832200 24394000 2459400 1482600 4901600 4783100 4322900 3417400 6682400 0 15839000 5097000 12118000 46606000 44575 562 39937 373378;373379;373380;373381;373382;373383;373384;373385;373386;373387;373388;373389;373390;373391;373392;373393;373394;373395;373396;373397;373398 294626;294627;294628;294629;294630 294628 1 RQSGQTDPLQK Unmodified 1256.6473 0.64731274 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 6 2 24 3 3 2 2 2 2 2 2 2 2 2 2 2 2 2 13.169 12.426 2;3 6.7202E-05 11718 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 107.03 82.561 4372100000 1925200000 347170000 498350000 145340000 104670000 153060000 114670000 77740000 100760000 172540000 122650000 165740000 134510000 111830000 197830000 44576 1518 39938 373399;373400;373401;373402;373403;373404;373405;373406;373407;373408;373409;373410;373411;373412;373413;373414;373415;373416;373417;373418;373419;373420;373421;373422;373423;373424;373425;373426;373427;373428;373429;373430 294631;294632;294633;294634;294635;294636;294637;294638;294639;294640;294641;294642;294643;294644;294645;294646;294647;294648;294649;294650;294651;294652;294653;294654;294655 294632 24 RQSIHLEQK Unmodified 1137.6255 0.62545508 3441 Q8NF91 SYNE1 Nesprin-1 yes yes 0 0 1 By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 21.103 21.424 3 0.040835 22523 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 31.422 12.443 42320000 0 0 0 0 0 0 6633300 2842000 5675600 0 0 7994700 4790300 5417700 8966300 44577 3441 39939 373431;373432;373433;373434;373435;373436;373437 294656 294656 1 RQSLEQQQR Unmodified 1171.6058 0.60578227 240 O15014 ZNF609 Zinc finger protein 609 yes yes 0 0 1 By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 6.1977 6.3225 3 0.0037389 4141 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 53.751 41.885 19550000 0 0 0 1623600 1355400 991760 1913500 2381600 2322600 1950300 2050400 0 1262900 1324200 2374300 44578 240 39940 373438;373439;373440;373441;373442;373443;373444;373445;373446;373447;373448 294657;294658;294659;294660;294661 294660 5 RQSLEQQQRGVDK Unmodified 1570.8176 0.81756596 240 O15014 ZNF609 Zinc finger protein 609 yes yes 0 0 2 By MS/MS 2 0 1 1 13.657 9.6613 3 0.0066133 14648 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.371 44.067 25070000 25070000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44579 240 39941 373449 294662 294662 1 RQSNVAAPGDATPPAEK Unmodified 1707.854 0.85401105 3955 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.62 3.02 5 24 2 1 2 2 2 2 2 2 2 2 2 2 2 2 2 24.979 24.4 2;3 1.8772E-36 26213 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 99.044 89.244 1037300000 68754000 21632000 31656000 65007000 60348000 60075000 87826000 59614000 64575000 67702000 71505000 87139000 85871000 98717000 106910000 44580 3955 39942 373450;373451;373452;373453;373454;373455;373456;373457;373458;373459;373460;373461;373462;373463;373464;373465;373466;373467;373468;373469;373470;373471;373472;373473;373474;373475;373476;373477;373478 294663;294664;294665;294666;294667;294668;294669;294670;294671;294672;294673;294674;294675;294676;294677;294678;294679;294680;294681;294682;294683;294684;294685;294686;294687;294688 294664 23 RQSPVNIETSHMIFDPFLTPLR Unmodified 2597.3424 0.34242729 4619 Q9NS85 CA10 Carbonic anhydrase-related protein 10 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 1 2 1 40.046 40.232 4 0.0013101 44461 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 20.439 2.3447 667800000 0 0 0 11367000 12830000 36534000 29301000 25106000 33269000 52563000 54904000 85260000 100140000 131630000 94905000 44581 4619 39943 373479;373480;373481;373482;373483;373484;373485;373486;373487;373488;373489;373490;373491 294689;294690;294691;294692;294693;294694;294695;294696;294697 294689 9 RQSSGSATNVASTPDNR Unmodified 1746.8245 0.82450184 3094 Q7Z460 CLASP1 CLIP-associating protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 12.135 12.253 3 0.0001268 11404 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 44.567 32.282 45076000 0 0 0 2196700 3291600 5825900 4083400 3420400 3231000 5685200 0 4130800 3316500 3750300 6144500 44582 3094 39944 373492;373493;373494;373495;373496;373497;373498;373499;373500;373501;373502 294698;294699;294700;294701;294702;294703;294704;294705;294706;294707;294708;294709;294710 294710 13 RQTFITLEK Unmodified 1134.6397 0.63970816 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.593 46.76 2 0.01829 52508 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 99.802 48.456 170070000 0 0 0 9166500 7194200 15970000 11487000 13445000 10421000 13502000 13175000 24522000 16947000 12535000 21703000 44583 2804 39945 373503;373504;373505;373506;373507;373508;373509;373510;373511;373512;373513;373514 294711;294712;294713;294714;294715;294716;294717;294718 294713 5 RQTNGCLNGYTPSRK Unmodified 1750.8533 0.85329954 4277 Q9BZX2 UCK2 Uridine-cytidine kinase 2 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.77 19.974 3 0.0014868 20370 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 70.197 64.034 77550000 0 0 0 4229500 3138100 5364700 6427400 7158700 5575700 0 9830600 8608700 7979700 6492500 12745000 44584 4277 39946 373515;373516;373517;373518;373519;373520;373521;373522;373523;373524;373525;373526 294719;294720;294721;294722;294723;294724;294725;294726;294727 294724 9 RQTVELLQGTK Unmodified 1271.7197 0.7197494 4412 Q9H694 BICC1 Protein bicaudal C homolog 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 37.89 37.949 3 0.00054034 40912 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 59.116 43.915 27492000 0 0 0 2048800 3502900 2019600 3191600 2212900 3329700 0 3661500 0 4972200 2552600 0 44585 4412 39947 373527;373528;373529;373530;373531;373532;373533;373534;373535 294728;294729;294730;294731;294732 294731 5 RQVDLLSAEQMR Unmodified 1444.7456 0.74564657 103 CON__Q7Z794;Q7Z794 KRT77 Keratin, type II cytoskeletal 1b yes no 0 0 1 By MS/MS 10 0 1 1 56.385 55.716 3 0.010271 64020 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 26.648 18.783 + 4983000 0 0 0 4983000 0 0 0 0 0 0 0 0 0 0 0 44586 103 39948 373536 294733 294733 1 RQVDQLTNDK Unmodified 1215.6208 0.62076364 870 P08670 VIM Vimentin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 13.629 13.79 2;3 4.4617E-36 13051 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 205.18 143.21 4892400000 0 0 0 261960000 287480000 243140000 291270000 337080000 250750000 443270000 450500000 666080000 560720000 419050000 681110000 44587 870 39949 373537;373538;373539;373540;373541;373542;373543;373544;373545;373546;373547;373548;373549;373550;373551;373552;373553;373554;373555;373556;373557;373558;373559;373560 294734;294735;294736;294737;294738;294739;294740;294741;294742;294743;294744;294745;294746;294747;294748;294749;294750;294751;294752;294753;294754;294755;294756;294757;294758;294759 294759 17 RQVEEAERLK Unmodified 1256.6837 0.68369824 2501 Q15149 PLEC Plectin yes yes 0 0 2 By MS/MS By MS/MS 10 0 3 2 1 12.873 12.836 3 0.0061248 11980 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 100.88 59.479 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44588 2501 39950 373561;373562;373563 294760;294761;294762 294762 3 RQVERSEICTEEPQK Unmodified 1887.9109 0.910874 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 2 By MS/MS 2 0 2 2 26.178 20.955 3;4 3.9962E-22 29836 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 120.53 63.199 92200000 92200000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44589 3443 39951 373564;373565 294763;294764;294765;294766 294766 4 RQVLEGEEIAYK Unmodified 1433.7514 0.75144346 2094 Q03252 LMNB2 Lamin-B2 yes yes 0 0 1 By MS/MS 2 0 1 1 49.823 45.907 3 0.00215 57730 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 56.139 46.819 11180000 0 0 11180000 0 0 0 0 0 0 0 0 0 0 0 0 44590 2094 39952 373566 294767 294767 1 RQVLLYEPQVNSPK Unmodified 1669.9152 0.91515474 3704 Q93034 CUL5 Cullin-5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 59.226 58.637 3 0.00026099 80604 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.287 50.497 87306000 38616000 0 0 0 0 5377400 4116400 0 3076000 4265600 6731600 7407600 4011200 3569000 10135000 44591 3704 39953 373567;373568;373569;373570;373571;373572;373573;373574;373575;373576 294768;294769;294770;294771;294772;294773;294774;294775;294776;294777 294773 10 RQVLNADSVEQSFVGLK Unmodified 1889.0007 0.0006752871 3565 Q8WVT3 TRAPPC12 Trafficking protein particle complex subunit 12 yes yes 0 0 1 By MS/MS 2 0 1 1 83.936 75.806 3 6.9417E-53 99056 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 121.82 116.29 27270000 27270000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44592 3565 39954 373577 294778 294778 1 RQVQNLVNK Unmodified 1097.6305 0.63054046 1029 P15924 DSP Desmoplakin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 16.225 16.005 2 0.015512 15448 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 104.21 68.023 690860000 10772000 0 0 179300000 21476000 34755000 31802000 78684000 20042000 26711000 47392000 66511000 65864000 38316000 69236000 44593 1029 39955 373578;373579;373580;373581;373582;373583;373584;373585;373586;373587;373588;373589;373590 294779;294780;294781;294782;294783;294784;294785;294786;294787;294788;294789;294790 294780 10 RQVQSLMVHQR Oxidation (M) 1396.7358 0.73575059 3714 Q969G3 SMARCE1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 14.525 14.749 3 0.0034296 13423 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 45.915 30.376 72168000 0 0 0 0 4672300 9008100 0 6095200 0 0 13871000 11138000 9065500 5474400 12843000 44594 3714 39956 373591;373592;373593;373594;373595;373596;373597;373598 294791;294792;294793;294794;294795 294793 5293 3 RQVQSLMVHQR Unmodified 1380.7408 0.74083597 3714 Q969G3 SMARCE1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 yes yes 0 0 1 By MS/MS 10 0 1 1 22.26 22.921 3 0.038826 23418 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 43.897 27.759 27967000 0 0 0 0 0 0 0 0 0 0 0 27967000 0 0 0 44595 3714 39956 373599 294796 294796 0 RQVQSLTCEVDALK Unmodified 1645.8458 0.84575455 870 P08670 VIM Vimentin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 2 20 1 1 1 1 2 2 2 2 1 2 2 2 1 2 59.369 58.983 2;3 0.00016701 66075 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 68.168 48.427 601460000 24993000 0 2919000 20068000 19989000 43282000 36482000 36372000 39779000 49516000 54625000 72296000 68006000 26488000 106650000 44596 870 39957 373600;373601;373602;373603;373604;373605;373606;373607;373608;373609;373610;373611;373612;373613;373614;373615;373616;373617;373618;373619;373620;373621 294797;294798;294799;294800;294801;294802;294803;294804;294805;294806;294807;294808;294809;294810;294811;294812;294813;294814 294810 18 RQVSIEEGERK Unmodified 1329.7001 0.70007659 1105 P20340 RAB6A Ras-related protein Rab-6A no no 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 12.011 11.585 3 0.00043424 10440 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 98.407 62.123 467070000 151660000 0 3395900 17898000 14022000 0 21638000 33265000 16277000 33949000 0 45532000 44846000 35932000 48649000 44597 1105 39958 373622;373623;373624;373625;373626;373627;373628;373629;373630;373631;373632;373633 294815;294816;294817;294818;294819;294820;294821;294822;294823;294824;294825 294816 3 RQYDQEIENLEK Unmodified 1563.7529 0.75290002 4365 Q9H2G2 SLK STE20-like serine/threonine-protein kinase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.25 5 19 1 2 2 1 2 2 1 1 2 2 2 2 2 2 47.971 47.047 2;3 7.1866E-05 59126 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 113.63 76.438 259780000 9650300 64187000 51773000 0 3981000 19259000 9019200 4949600 3942000 18740000 15522000 16631000 10566000 11901000 19660000 44598 4365 39959 373634;373635;373636;373637;373638;373639;373640;373641;373642;373643;373644;373645;373646;373647;373648;373649;373650;373651;373652;373653;373654;373655;373656;373657 294826;294827;294828;294829;294830;294831;294832 294830 6 RRAEEDLTFEEDDEMAAVMGFSGFGSTK Unmodified 3124.3754 0.3753795 3936 Q96NC0 ZMAT2 Zinc finger matrin-type protein 2 yes yes 0 0 2 By MS/MS 2.5 0.5 1 1 2 94.012 88.189 4 0.00015258 112496 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 37.637 28.788 9588700 9588700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44599 3936 39960 373658;373659 294833;294834 294834 2 RRAEENALQQK Unmodified 1341.7113 0.71130998 1029 P15924 DSP Desmoplakin yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 7.1613 7.2987 3 0.046744 4231 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 43.544 5.8629 415820000 0 0 0 46221000 17412000 0 22624000 92595000 23066000 36930000 72444000 0 50334000 24444000 29748000 44600 1029 39961 373660;373661;373662;373663;373664;373665;373666;373667;373668;373669 294835 294835 0 RRAGDLLEDSPK Unmodified 1355.7157 0.71572665 1674 P51858 HDGF Hepatoma-derived growth factor yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 29.288 28.871 3 0.0043598 29716 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 85.522 51.343 234740000 116060000 0 0 0 0 5121400 5806400 15661000 6204200 9528100 33921000 15209000 7396200 19829000 0 44601 1674 39962 373670;373671;373672;373673;373674;373675;373676;373677;373678;373679 294836;294837;294838;294839 294839 1 RRDDGLSAAAR Unmodified 1186.6167 0.61668131 2016 P84101 SERF2 Small EDRK-rich factor 2 yes yes 0 0 2 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 9.9436 10.041 3 0.0060156 7743 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.011 60.681 105930000 0 0 0 7090400 4384000 4390400 6011200 5375000 5526700 4906600 27907000 0 0 0 40340000 44602 2016 39963 373680;373681;373682;373683;373684;373685;373686;373687;373688 294840;294841 294840 1 RRDEQLSPEEEEK Unmodified 1643.7751 0.77509203 1021 P15408 FOSL2 Fos-related antigen 2 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 14.397 14.631 3 0.0091021 13274 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.043 46.283 53680000 0 0 0 0 0 4911400 3352500 0 4806700 6084800 6374300 7492000 5422300 5329800 9906400 44603 1021 39964 373689;373690;373691;373692;373693;373694;373695;373696;373697 294842;294843 294842 2 RREEEELAR Unmodified 1186.6054 0.60544792 2994 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 no no 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.9612 8.0882 3 0.005778 6730 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 125.75 74.47 539580000 0 0 0 32415000 16357000 30795000 26120000 29044000 31628000 29653000 98991000 73952000 74607000 36906000 59115000 44604 2994 39965 373698;373699;373700;373701;373702;373703;373704;373705;373706;373707;373708;373709 294844;294845;294846;294847;294848;294849;294850 294846 5 RREEEVSGVSDPQPQDAGSR Unmodified 2198.0312 0.031200147 134 O00257 CBX4 E3 SUMO-protein ligase CBX4 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 25.207 25.546 3 0.012894 25769 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.257 32.161 22107000 0 0 0 0 0 4938800 3894600 0 0 0 0 5400300 0 0 7872900 44605 134 39966 373710;373711;373712;373713 294851;294852 294852 2 RREEGPPPPSPDGASSDAEPEPPSGR Unmodified 2670.227 0.22699942 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 0 2 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 34.987 35.234 4 0.0002988 38141 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 31.17 24.058 29295000 0 0 0 0 0 0 5676200 0 0 5584000 8279500 0 0 9754900 0 44606 4634 39967 373714;373715;373716;373717 294853;294854 294853 2 RREELFIEQK Unmodified 1346.7306 0.73064844 5021 Q9UMY1 NOL7 Nucleolar protein 7 yes yes 0 0 2 By MS/MS By matching 10 0 2 1 1 34.394 35.128 3 0.038033 38300 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.82 24.902 54403000 0 0 0 0 0 0 0 0 0 0 0 25700000 0 0 28703000 44607 5021 39968 373718;373719 294855 294855 0 RREFITGDVEPTDAESEWHSENEEEEK Unmodified 3247.4178 0.4177729 4057 Q99733 NAP1L4 Nucleosome assembly protein 1-like 4 yes yes 0 0 2 By MS/MS 2 0 1 1 70.303 62.018 4 2.4332E-15 82587 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.19 60.524 15525000 15525000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44608 4057 39969 373720 294856 294856 1 RRGETESEEFEK Unmodified 1495.6903 0.69029976 2117 Q05682 CALD1 Caldesmon yes yes 0 0 2 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 11.613 11.759 3 0.0050635 10016 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 81.709 46.064 76090000 0 0 0 2919400 1703900 3785100 2704300 5127100 2967700 8058100 3743700 14247000 7713300 9353000 13768000 44609 2117 39970 373721;373722;373723;373724;373725;373726;373727;373728;373729;373730;373731;373732 294857;294858;294859;294860;294861 294861 2 RRGGPPGPPISR Unmodified 1245.7054 0.70543674 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 1 2 1 1 1 2 2 1 2 2 1 20.483 20.7 3 6.279E-05 21627 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 95.401 78.769 2092300000 0 0 0 84175000 65135000 134030000 134380000 127290000 151620000 189780000 272800000 260560000 287880000 164180000 220440000 44610 2102 39971 373733;373734;373735;373736;373737;373738;373739;373740;373741;373742;373743;373744;373745;373746;373747;373748;373749 294862;294863;294864;294865;294866;294867;294868;294869;294870;294871;294872;294873;294874;294875;294876 294873 6 RRLDDQESPVYAAQQR Unmodified 1930.9609 0.96093574 3994 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 2 2 2 2 2 1 2 2 2 2 32.794 33.091 3;4 8.3996E-06 36257 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 84.14 77.249 230640000 0 0 0 0 0 21668000 20089000 18679000 22500000 25802000 17463000 27310000 23644000 16930000 36558000 44611 3994 39972 373750;373751;373752;373753;373754;373755;373756;373757;373758;373759;373760;373761;373762;373763;373764;373765;373766;373767;373768 294877;294878;294879;294880;294881;294882;294883;294884;294885;294886;294887;294888;294889;294890;294891 294890 5 RRLDECEEAFQGTK Unmodified 1737.8104 0.81043168 1844 P61289 PSME3 Proteasome activator complex subunit 3 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.08 2.56 3 23 2 1 1 1 2 2 2 2 2 2 2 2 3 2 31.033 30.87 3;4 7.8172E-05 33291 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 109.07 92.723 1161100000 392580000 0 3135600 9682500 8158600 65657000 20994000 27810000 21754000 38378000 44286000 151080000 65295000 69314000 243030000 44612 1844 39973 373769;373770;373771;373772;373773;373774;373775;373776;373777;373778;373779;373780;373781;373782;373783;373784;373785;373786;373787;373788;373789;373790;373791;373792;373793;373794 294892;294893;294894;294895;294896;294897;294898;294899;294900;294901;294902;294903;294904 294898 9 RRPDQMEDGLEPEK Unmodified 1698.7995 0.79953264 4199 Q9BW19 KIFC1 Kinesin-like protein KIFC1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 29.769 30.15 3 0.017218 31268 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.254 21.293 58715000 0 0 0 0 0 7007500 0 0 0 6099200 8425000 7927000 7834700 8044100 13378000 44613 4199 39974 373795;373796;373797;373798;373799;373800;373801 294905;294906;294907 294906 1 RRPEPAGGGNVSAK Unmodified 1394.7379 0.73785908 3010 Q6ZSJ8 C1orf122 Uncharacterized protein C1orf122 yes yes 0 0 2 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.8318 6.9554 3 0.0040888 4357 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.972 41.643 147080000 0 0 0 5724000 5913200 7324500 6016000 5184200 8603400 12878000 21252000 14239000 15929000 12521000 31501000 44614 3010 39975 373802;373803;373804;373805;373806;373807;373808;373809;373810;373811;373812;373813 294908;294909;294910;294911 294908 2 RRPEPIIPVTQPR Unmodified 1557.9103 0.91034414 3663 Q92797 SYMPK Symplekin yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 45.826 46.256 3 0.013735 52637 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 59.294 54.403 70403000 0 0 0 0 0 0 0 8682800 8952100 0 0 21863000 13292000 0 17612000 44615 3663 39976 373814;373815;373816;373817;373818 294912 294912 0 RRPESAPAESSPSK Unmodified 1497.7536 0.75356872 2144 Q07889 SOS1 Son of sevenless homolog 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.5459 6.6702 3 0.0032366 4087 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.898 34.87 45762000 0 0 0 1863400 1480700 4121000 2513700 2255500 2552400 6817000 4692300 4617300 3093800 4379300 7375200 44616 2144 39977 373819;373820;373821;373822;373823;373824;373825;373826;373827;373828;373829;373830 294913;294914;294915;294916;294917 294915 5 RRPNDPVPIPDK Unmodified 1402.7681 0.76809658 4435 Q9H7L9 SUDS3 Sin3 histone deacetylase corepressor complex component SDS3 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.96 34.142 3 0.0039674 37028 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 64.224 47.013 128950000 0 0 0 6306400 4923500 8621800 7772100 9729000 6335000 7544700 14864000 23812000 13626000 9442800 15971000 44617 4435 39978 373831;373832;373833;373834;373835;373836;373837;373838;373839;373840;373841;373842 294918;294919;294920;294921;294922;294923;294924;294925 294921 8 RRPSDENTIAPSEVQK Unmodified 1825.9282 0.92823863 3180 Q86W92 PPFIBP1 Liprin-beta-1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 1 2 2 2 2 2 2 2 2 2 2 24.365 24.611 3;4 1.3948E-15 26491 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 121.99 121.99 541120000 0 0 0 14089000 21069000 27345000 31426000 32973000 21360000 44351000 59973000 71199000 66528000 68147000 82657000 44618 3180 39979 373843;373844;373845;373846;373847;373848;373849;373850;373851;373852;373853;373854;373855;373856;373857;373858;373859;373860;373861;373862;373863;373864 294926;294927;294928;294929;294930;294931;294932;294933;294934;294935;294936;294937;294938;294939;294940;294941;294942;294943;294944 294929 14 RRPSGSEQSDNESVQSGR Unmodified 1974.9104 0.91035673 2945 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 6.3721 6.4975 3;4 3.4632E-38 3854 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 104.44 99.009 114510000 0 0 0 4609900 6521400 6534600 6643100 4685100 6486500 8107700 12199000 13272000 14452000 15021000 15974000 44619 2945 39980 373865;373866;373867;373868;373869;373870;373871;373872;373873;373874;373875;373876;373877;373878;373879;373880;373881;373882;373883;373884;373885;373886;373887;373888 294945;294946;294947;294948;294949 294946 5 RRPSSNLNNNVR Unmodified 1425.7549 0.75490613 4692 Q9NW75 GPATCH2 G patch domain-containing protein 2 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 9.3011 9.2259 3 0.026437 7710 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 55.452 45.609 25970000 0 0 0 8245500 4412100 4870500 8442300 0 0 0 0 0 0 0 0 44620 4692 39981 373889;373890;373891;373892 294950 294950 0 RRQDSLESMK Oxidation (M) 1264.6194 0.61938343 1029 P15924 DSP Desmoplakin yes yes 0 1 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 5.9809 6.0983 3 0.0035981 3559 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 88.056 65.97 654270000 0 0 0 145940000 26722000 30236000 30132000 114950000 21588000 42087000 40398000 81603000 74860000 18046000 27705000 44621 1029 39982 373893;373894;373895;373896;373897;373898;373899;373900;373901;373902;373903;373904 294951;294952;294953;294954;294955;294956;294957;294958;294959 294959 1441 9 RRQDSLESMK Unmodified 1248.6245 0.62446881 1029 P15924 DSP Desmoplakin yes yes 0 0 2 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 2 1 1 1 1 2 13.098 13.275 3 0.014817 12162 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 96.015 69.342 291890000 0 0 0 57837000 13834000 724120 17103000 55123000 12976000 0 15827000 39744000 43421000 14648000 20655000 44622 1029 39982 373905;373906;373907;373908;373909;373910;373911;373912;373913;373914;373915;373916;373917 294960;294961;294962;294963;294964 294961 0 RRQGQELSAAR Unmodified 1270.6854 0.68542958 2100 Q04323 UBXN1 UBX domain-containing protein 1 yes yes 0 0 2 By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 6.5372 6.6584 3 0.04761 4454 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.423 27.191 16718000 0 0 0 0 735610 491980 939480 0 1690600 0 1844500 805700 0 0 10210000 44623 2100 39983 373918;373919;373920;373921;373922;373923;373924 294965 294965 1 RRSAEVDDGAAEK Unmodified 1402.6801 0.68006943 3193 Q86XA9 HEATR5A HEAT repeat-containing protein 5A yes yes 0 0 2 By MS/MS 2 0 1 1 7.9537 4.4386 3 1.5069E-07 7747 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.45 62.224 27749000 27749000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44624 3193 39984 373925 294966 294966 1 RRSEVVESTTESQDK Unmodified 1749.8493 0.8493196 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 9.8986 10.03 3 1.0295E-09 7491 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 103.39 103.39 89407000 0 0 0 4744400 4421300 7172000 5565200 3052900 3701700 5628800 14381000 13136000 9763000 5331200 12509000 44625 2804 39985 373926;373927;373928;373929;373930;373931;373932;373933;373934;373935;373936;373937 294967;294968;294969;294970;294971 294968 3 RRTEEGPTLSYGR Unmodified 1520.7696 0.76955314 1473 P43243 MATR3 Matrin-3 yes yes 0 0 2 By matching By matching By matching By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 26.359 26.67 3;4 0.018296 26961 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.014 31.215 28998000 0 0 0 0 0 4662700 2040100 0 2300600 0 0 4220100 3350100 0 12424000 44626 1473 39986 373938;373939;373940;373941;373942;373943 294972;294973 294972 0 RRVSPEEAIK Unmodified 1183.6673 0.6673199 804 P05198 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes yes 0 0 2 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 16.35 16.662 3 0.048531 15598 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 50.292 12.206 75378000 0 0 0 0 992080 0 0 0 0 0 19557000 20813000 18086000 15267000 662830 44627 804 39987 373944;373945;373946;373947;373948;373949 294974 294974 0 RRVVIVDPETNK Unmodified 1424.81 0.80996139 1029 P15924 DSP Desmoplakin yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 30.408 30.549 3 2.359E-05 33999 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 93.011 64.805 250280000 0 0 0 29110000 0 19371000 14517000 72867000 18692000 15738000 26197000 0 36845000 16938000 0 44628 1029 39988 373950;373951;373952;373953;373954;373955;373956;373957;373958 294975;294976;294977;294978 294978 3 RRWDQTADQTPGATPK Unmodified 1826.9024 0.90235823 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 2 1 2 2 2 1 2 2 2 2 27.108 27.423 3;4 2.4958E-18 29405 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 106.19 90.938 536030000 0 0 0 0 0 42288000 22022000 18281000 40167000 12487000 22863000 90168000 114650000 72645000 100460000 44629 516 39989 373959;373960;373961;373962;373963;373964;373965;373966;373967;373968;373969;373970;373971;373972;373973;373974;373975;373976 294979;294980;294981;294982;294983;294984;294985;294986;294987;294988;294989;294990;294991;294992;294993;294994 294992 8 RSAAPSQLQGNSFK Unmodified 1489.7637 0.76373948 5263 Q9Y620 RAD54B DNA repair and recombination protein RAD54B yes yes 0 0 1 By matching By MS/MS By matching 10 0 3 1 1 1 31.301 31.415 3 0.0037751 34269 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 27.133 20.994 10245000 0 0 0 0 0 0 4401100 3495300 2348600 0 0 0 0 0 0 44630 5263 39990 373977;373978;373979 294995 294995 1 RSAEEEAADLPTK Unmodified 1415.6892 0.68923713 3570 Q8WW12 PCNP PEST proteolytic signal-containing nuclear protein yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 7.86 3.4 1 1 5 2 1 1 1 1 1 31.291 30.219 3 0.0061909 39526 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 39.746 27.364 72610000 0 30662000 0 0 0 7349600 3413200 0 0 0 0 8316200 0 7561200 15307000 44631 3570 39991 373980;373981;373982;373983;373984;373985;373986 294996;294997;294998;294999 294997 4 RSAEEEAADLPTKPTK Unmodified 1741.8846 0.88464248 3570 Q8WW12 PCNP PEST proteolytic signal-containing nuclear protein yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.58 1 2 2 12 2 1 2 1 1 1 1 1 1 1 1 1 1 1 1 36.798 36.275 3;4 1.1056E-41 39656 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 151.59 144 1812600000 13584000 22274000 954840000 37480000 34201000 45653000 62976000 40458000 27902000 60065000 87475000 145940000 52930000 78196000 148600000 44632 3570 39992 373987;373988;373989;373990;373991;373992;373993;373994;373995;373996;373997;373998;373999;374000;374001;374002;374003 295000;295001;295002;295003;295004;295005;295006;295007;295008;295009;295010;295011;295012;295013;295014;295015;295016;295017;295018;295019 295012 13 RSAELPDAVGPIVQLQEK Unmodified 1949.0582 0.058190166 3949 Q96PU8 QKI Protein quaking yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 4 16 2 1 1 1 1 2 1 1 1 1 1 1 1 2 3 78.18 77.69 2;3 4.2619E-83 89425 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 183.6 112.64 720520000 13922000 0 23439000 15979000 26164000 58750000 31707000 55143000 53684000 66767000 59911000 71965000 49025000 60929000 133140000 44633 3949 39993 374004;374005;374006;374007;374008;374009;374010;374011;374012;374013;374014;374015;374016;374017;374018;374019;374020;374021;374022;374023 295020;295021;295022;295023;295024;295025;295026;295027;295028;295029;295030;295031;295032;295033;295034;295035;295036;295037;295038;295039 295026 20 RSAEPAEALVLACK Unmodified 1513.7923 0.79226242 3788 Q96CW6 SLC7A6OS Probable RNA polymerase II nuclear localization protein SLC7A6OS yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 66.459 60.432 3 0.00084071 81245 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.285 53.305 14583000 11408000 0 3175400 0 0 0 0 0 0 0 0 0 0 0 0 44634 3788 39994 374024;374025 295040;295041;295042 295041 3 RSANQMGVSAK Unmodified 1147.5768 0.57679033 2926 Q6P2C8 MED27 Mediator of RNA polymerase II transcription subunit 27 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 8.8868 9.0811 2 0.023801 6277 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 77.14 36.788 2350100 0 0 0 0 0 0 0 0 0 0 0 0 2350100 0 0 44635 2926 39995 374026;374027 295043;295044 295043 2 RSAPGGGSKVPQK Unmodified 1267.6997 0.69968266 830 P06748 NPM1 Nucleophosmin yes yes 0 0 2 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 6.1476 6.2507 3 0.017432 4324 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 47.774 38.666 24269000 0 0 0 749870 1513700 607400 1607600 1126900 1152500 1627600 0 5818800 2114600 2625500 5325100 44636 830 39996 374028;374029;374030;374031;374032;374033;374034;374035;374036;374037;374038 295045 295045 1 RSASLETK Unmodified 890.48214 0.48214489 2136 Q07157 TJP1 Tight junction protein ZO-1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 6.6842 3.8178 2 0.04929 6948 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.933 18.471 148710000 134670000 0 14042000 0 0 0 0 0 0 0 0 0 0 0 0 44637 2136 39997 374039;374040 295046 295046 0 RSASPDDDLGSSNWEAADLGNEERK Unmodified 2718.2117 0.21174329 127 O00193 SMAP Small acidic protein yes yes 0 0 2 By MS/MS By MS/MS By matching By MS/MS 5.12 3.79 4 1 3 3 2 1 2 62.973 59.516 3;4 3.4029E-120 79372 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 157.83 156.17 139100000 40995000 0 66465000 0 0 0 0 0 0 0 5941200 0 0 0 25699000 44638 127 39998 374041;374042;374043;374044;374045;374046;374047;374048 295047;295048;295049;295050;295051;295052;295053;295054 295051 8 RSCFPASLTASR Unmodified 1351.6667 0.66666797 3047 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 45.59 45.82 3 0.0019378 50555 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 40.751 34.614 29419000 0 0 0 3235200 0 0 3806100 0 1166500 0 0 8093900 0 6373800 6743800 44639 3047 39999 374049;374050;374051;374052;374053;374054 295055;295056 295056 2 RSCPSFSASSEGTR Unmodified 1527.6736 0.67360384 1223 P27707 DCK Deoxycytidine kinase yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 21.761 22.036 3 0.0013382 22498 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 36.583 29.854 59139000 0 0 0 0 3135600 8947300 0 4868900 2792000 0 7448900 8739500 5902600 7363400 9940800 44640 1223 40000 374055;374056;374057;374058;374059;374060;374061;374062;374063 295057;295058;295059;295060 295058 3 RSDDGVFHIGAAAQDK Unmodified 1685.8121 0.81214624 2867 Q6BDS2 UHRF1BP1 UHRF1-binding protein 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 44.729 45.07 3 6.3945E-21 50802 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 95.205 85.547 117510000 0 0 0 0 0 15578000 0 7057700 7966700 7445800 10535000 28426000 14556000 13107000 12836000 44641 2867 40001 374064;374065;374066;374067;374068;374069;374070;374071;374072 295061;295062;295063;295064;295065;295066;295067;295068 295061 8 RSDGEQDGAAGSMDASTQGLLEGIGLDGDTLAPMETDEPTASDSK Unmodified 4494.9763 0.97625513 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 1 By MS/MS 2 0 1 1 94.816 86.686 4 3.0642E-06 112216 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 30.064 28.786 16141000 16141000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44642 3119 40002 374073 295069 295069 1 RSDLQDELDINELPNCK Unmodified 2057.9688 0.96878281 3524 Q8TF05 PPP4R1 Serine/threonine-protein phosphatase 4 regulatory subunit 1 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 77.693 72.231 3 0.0023294 91364 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 48.372 39.982 40949000 9995000 30954000 0 0 0 0 0 0 0 0 0 0 0 0 0 44643 3524 40003 374074;374075;374076 295070;295071 295070 1 RSDLYAVEMK Unmodified 1210.6016 0.6016081 4573 Q9NQR4 NIT2 Omega-amidase NIT2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 2 2 2 49.894 44.299 2;3 9.2888E-05 55599 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 138.22 112.48 99707000 38298000 7996400 53412000 0 0 0 0 0 0 0 0 0 0 0 0 44644 4573 40004 374077;374078;374079;374080;374081;374082 295072;295073;295074;295075;295076;295077 295077 4 RSDLYAVEMK Oxidation (M) 1226.5965 0.59652272 4573 Q9NQR4 NIT2 Omega-amidase NIT2 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 2 2 2 34.38 29.602 2;3 0.007114 37123 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 62.466 47.787 102830000 10087000 28616000 64129000 0 0 0 0 0 0 0 0 0 0 0 0 44645 4573 40004 374083;374084;374085;374086;374087;374088 295078;295079;295080;295081 295078 5978 1 RSDSVSASER Unmodified 1092.516 0.51596421 360 O43719 HTATSF1 HIV Tat-specific factor 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 5.8494 5.9668 2 0.0041912 3206 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 125.75 79.321 67495000 0 0 0 5156900 4255100 4867600 6330900 6146000 6161000 4776700 4304200 5685100 5485100 5054700 9271700 44646 360 40005 374089;374090;374091;374092;374093;374094;374095;374096;374097;374098;374099;374100 295082;295083;295084 295083 3 RSDSYVLLEHSVK Unmodified 1531.7995 0.79945628 4945 Q9UJX4 ANAPC5 Anaphase-promoting complex subunit 5 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.247 48.408 3 2.9361E-07 54627 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 82.925 77.019 168600000 0 0 0 7691400 2977400 17673000 8481200 13151000 12180000 18651000 12169000 16044000 20450000 13218000 25917000 44647 4945 40006 374101;374102;374103;374104;374105;374106;374107;374108;374109;374110;374111;374112 295085;295086;295087;295088;295089;295090;295091;295092;295093;295094;295095;295096;295097 295094 13 RSEAEEAITSFNGHKPPGSSEPITVK Unmodified 2767.3777 0.3776864 2566 Q15717 ELAVL1 ELAV-like protein 1 yes yes 0 0 2 By MS/MS By MS/MS By matching By matching By MS/MS 4.83 3.67 3 1 2 2 1 1 1 1 66.879 62.854 4;5 2.9433E-31 84392 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.53 97.418 248100000 212620000 1600800 3461300 0 0 0 0 0 0 0 0 0 7377400 0 23049000 44648 2566 40007 374113;374114;374115;374116;374117;374118 295098;295099;295100;295101;295102 295101 4 RSEDDLRQQR Unmodified 1301.6436 0.64362434 1029 P15924 DSP Desmoplakin yes yes 0 0 2 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.7055 6.8291 3 0.034638 4768 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 83.358 69.538 46429000 0 0 0 5757700 2531800 2098100 4552500 6331600 4233900 2985000 3213200 5755400 2683100 3216600 3070300 44649 1029 40008 374119;374120;374121;374122;374123;374124;374125;374126;374127;374128;374129;374130 295103 295103 0 RSEDEPPAASASAAPPPQRDEEEPDGVPEK Unmodified 3157.4436 0.44359372 3885 Q96IZ0 PAWR PRKC apoptosis WT1 regulator protein yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 40.986 41.162 4 4.0475E-29 45587 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 62.683 57.064 95962000 0 0 0 0 7268500 8627700 11566000 0 4936800 10999000 18848000 19799000 0 13916000 0 44650 3885 40009 374131;374132;374133;374134;374135;374136;374137;374138 295104;295105;295106;295107;295108;295109;295110;295111;295112;295113 295108 9 RSEDESETEDEEEK Unmodified 1710.6704 0.67041176 1183 P25205 MCM3 DNA replication licensing factor MCM3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.56 3.62 4 1 11 2 3 1 1 1 1 1 1 1 1 1 1 1 6.8606 5.8893 2;3 4.2718E-33 4154 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 134.88 125.93 128380000 28552000 47609000 0 1680600 1555200 4241800 1916100 0 2500700 4032700 7422600 6838800 5500800 4898500 11627000 44651 1183 40010 374139;374140;374141;374142;374143;374144;374145;374146;374147;374148;374149;374150;374151;374152;374153;374154 295114;295115;295116;295117;295118;295119;295120;295121;295122;295123;295124;295125;295126 295118 13 RSEDQIELK Unmodified 1116.5775 0.57750184 2810 Q5VT52 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.539 23.744 2 3.5696E-05 25525 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 137.69 60.411 701590000 0 0 0 35069000 39525000 36420000 47519000 58621000 41079000 56381000 65312000 100560000 88267000 63527000 69309000 44652 2810 40011 374155;374156;374157;374158;374159;374160;374161;374162;374163;374164;374165;374166 295127;295128;295129;295130;295131;295132 295131 2 RSEGELQQASAK Unmodified 1302.6528 0.65279205 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.67 1.6 1 23 1 2 2 2 2 2 2 2 1 2 2 2 2 9.9436 9.9656 2;3 0.00021997 7805 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.379 32.011 129390000 0 0 14676000 6559600 4446600 6810100 9523400 7771300 6175700 8589900 17435000 14636000 11444000 7265800 14060000 44653 2291 40012 374167;374168;374169;374170;374171;374172;374173;374174;374175;374176;374177;374178;374179;374180;374181;374182;374183;374184;374185;374186;374187;374188;374189;374190 295133;295134;295135;295136;295137;295138;295139;295140;295141;295142;295143;295144;295145;295146;295147;295148;295149 295138 14 RSEGFSMDRK Unmodified 1211.5717 0.57170495 3102 Q7Z4V5 HDGFRP2 Hepatoma-derived growth factor-related protein 2 yes yes 0 0 2 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 14.905 15.069 3 0.025234 14308 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 68.132 50.659 222630000 0 0 0 503020 810830 10621000 10081000 8789300 0 10803000 21381000 35037000 20069000 21490000 83043000 44654 3102 40013 374191;374192;374193;374194;374195;374196;374197;374198;374199;374200;374201 295150;295151 295150 0 RSEGFSMDRK Oxidation (M) 1227.5666 0.56661958 3102 Q7Z4V5 HDGFRP2 Hepatoma-derived growth factor-related protein 2 yes yes 0 1 2 By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.3773 6.4969 3 0.047706 4612 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 43.604 28.461 102300000 0 0 0 4857600 4844400 6217100 5926500 3925400 8150000 10066000 12342000 15988000 11875000 5680800 12423000 44655 3102 40013 374202;374203;374204;374205;374206;374207;374208;374209;374210;374211;374212;374213 295152 295152 0 RSEGSAQAAPGPGSPQLPAGPQESAAEPTPAVPLK Unmodified 3349.6902 0.69024677 4208 Q9BWE0 REPIN1 Replication initiator 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 2 2 2 1 1 1 1 2 1 2 1 2 73.552 73.571 3;4 1.0357E-74 84909 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 100.64 98.787 381000000 0 0 0 30646000 46629000 65643000 24782000 14735000 21013000 25189000 19694000 26526000 40381000 18624000 47141000 44656 4208 40014 374214;374215;374216;374217;374218;374219;374220;374221;374222;374223;374224;374225;374226;374227;374228;374229;374230;374231 295153;295154;295155;295156;295157;295158;295159;295160;295161;295162;295163;295164;295165;295166;295167;295168;295169;295170;295171;295172;295173;295174;295175;295176 295172 24 RSELPIAELTGHTR Unmodified 1578.8478 0.84780346 4434 Q9H7D7 WDR26 WD repeat-containing protein 26 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 2 2 61.461 61.759 3;4 0.00020212 69263 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.172 44.942 55480000 0 0 0 0 0 5011000 0 2948500 0 0 0 7194000 5167600 8677300 26482000 44657 4434 40015 374232;374233;374234;374235;374236;374237;374238;374239 295177;295178;295179;295180;295181;295182 295178 4 RSELSQDAEPAGSQETK Unmodified 1831.8548 0.85479891 4189 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 19.504 19.673 3 1.5638E-05 20000 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 64.454 59.653 74726000 0 0 0 5214900 4652800 6339100 5736900 5781700 5239800 9904300 0 12136000 7708500 4722400 7288900 44658 4189 40016 374240;374241;374242;374243;374244;374245;374246;374247;374248;374249;374250 295183;295184;295185;295186;295187;295188;295189;295190;295191;295192;295193;295194 295191 12 RSENEEFVEVGR Unmodified 1449.6848 0.68482046 927 P10644 PRKAR1A cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.302 38.481 3 0.0013183 42797 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 58.595 43.055 166690000 0 0 0 9224100 4344300 17053000 16337000 6423700 5896500 16073000 17115000 17193000 15623000 14426000 26985000 44659 927 40017 374251;374252;374253;374254;374255;374256;374257;374258;374259;374260;374261;374262 295195;295196;295197;295198;295199;295200;295201;295202;295203;295204 295195 10 RSEPFPAPPEDDAATAK Unmodified 1797.8533 0.85334235 4181 Q9BVA0 KATNB1 Katanin p80 WD40 repeat-containing subunit B1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 47.67 47.951 3 0.010111 53092 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 28.869 23.026 28127000 0 0 0 0 0 3694100 3456900 0 0 6621900 4619100 0 0 4636500 5098700 44660 4181 40018 374263;374264;374265;374266;374267;374268 295205 295205 1 RSEPIYNSR Unmodified 1120.5625 0.56252048 2781 Q5T749 KPRP Keratinocyte proline-rich protein yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.537 13.695 2 1.8499E-05 13068 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 157.75 81.268 1423000000 0 0 0 313490000 62075000 78824000 64508000 168190000 50027000 120580000 84272000 145320000 228790000 62925000 44017000 44661 2781 40019 374269;374270;374271;374272;374273;374274;374275;374276;374277;374278;374279;374280 295206;295207;295208;295209;295210;295211;295212;295213;295214 295208 5 RSEVEEVDFAGWLCK Unmodified 1823.8512 0.85123386 1373 P36507 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 yes yes 0 0 1 By MS/MS 2 0 1 1 89.335 81.205 3 0.00025701 105582 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.062 58.445 6398600 6398600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44662 1373 40020 374281 295215 295215 1 RSEVVESTTESQDK Unmodified 1593.7482 0.74820857 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 1 By MS/MS 10 0 1 1 12.389 12.216 3 0.022988 11236 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 44.252 32.812 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44663 2804 40021 374282 295216 295216 1 RSFSSIVEVAR Unmodified 1249.6779 0.67788459 1536 P48382 RFX5 DNA-binding protein RFX5 yes yes 0 0 1 By matching By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 55.486 55.789 3 0.015517 62323 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 28.806 13.604 23709000 0 0 0 0 0 2378800 1302700 0 2499100 0 2389500 5274800 3565000 2158000 4141100 44664 1536 40022 374283;374284;374285;374286;374287;374288;374289;374290 295217;295218 295217 2 RSFSSQRPVDR Unmodified 1333.6851 0.68509523 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.161 12.31 3 0.0063909 11267 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 84.892 57.923 347630000 0 0 0 16302000 18214000 26510000 22707000 20177000 19535000 30953000 16797000 47796000 34629000 17046000 76960000 44665 5216 40023 374291;374292;374293;374294;374295;374296;374297;374298;374299;374300;374301;374302 295219;295220;295221 295220 0 RSGPTDDGEEEMEEDTVTNGS Unmodified 2253.8815 0.88154353 892 P09661 SNRPA1 U2 small nuclear ribonucleoprotein A' yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 41.203 41.391 2 1.1555E-52 45830 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 122.34 121.87 71778000 0 0 0 6346300 3533700 6797700 0 4021600 3890400 8702200 6244700 8099600 5538600 6461000 12143000 44666 892 40024 374303;374304;374305;374306;374307;374308;374309;374310;374311;374312;374313 295222;295223;295224;295225;295226;295227;295228;295229;295230 295228 9 RSGPTDDGEEEMEEDTVTNGS Oxidation (M) 2269.8765 0.87645815 892 P09661 SNRPA1 U2 small nuclear ribonucleoprotein A' yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 29.513 29.751 2 4.6771E-36 32089 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 110.77 110.31 38824000 0 0 0 0 2165200 0 5425100 2062700 3577900 2754500 0 8036800 5880600 3014500 5906500 44667 892 40024 374314;374315;374316;374317;374318;374319;374320;374321;374322;374323 295231;295232;295233;295234 295234 1144 4 RSGQVLEVSGSK Unmodified 1245.6677 0.66771383 1121 P21281 ATP6V1B2 V-type proton ATPase subunit B, brain isoform yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.71 3.61 4 10 2 2 2 1 1 1 2 1 2 21.435 20.505 2;3 0.0012095 28729 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.466 67.6 451290000 289660000 0 22472000 24933000 0 8274200 10893000 0 0 0 19045000 30334000 0 19790000 25890000 44668 1121 40025 374324;374325;374326;374327;374328;374329;374330;374331;374332;374333;374334;374335;374336;374337 295235;295236;295237;295238;295239;295240;295241;295242;295243;295244 295239 9 RSGSGVNPYCGLIEEAYGLDK Unmodified 2284.0794 0.079395893 424 O60684 KPNA6 Importin subunit alpha-7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 3.8 3.12 3 1 1 2 1 1 1 88.003 84.235 3 3.4934E-72 106674 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 141.1 129.8 244890000 184220000 49881000 3911200 0 0 0 0 0 0 0 0 0 0 0 6874400 44669 424 40026 374338;374339;374340;374341;374342 295245;295246;295247;295248;295249;295250 295248 6 RSGVAYIAAPSGSAADK Unmodified 1619.8267 0.82673367 1307 P31939 ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 3 6 2 1 1 1 1 1 2 41.012 39.233 2;3 9.0975E-57 55159 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 185.26 147.92 859740000 712460000 0 21911000 0 0 0 0 0 0 3699600 30436000 15775000 0 14207000 61252000 44670 1307 40027 374343;374344;374345;374346;374347;374348;374349;374350;374351 295251;295252;295253;295254;295255;295256;295257;295258;295259;295260;295261;295262 295257 10 RSHSPSIDGTPK Unmodified 1280.6473 0.64731274 4213 Q9BWT3 PAPOLG Poly(A) polymerase gamma yes yes 0 0 1 By MS/MS 2 0 1 1 16.697 12.487 3 0.030361 18066 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 26.232 10.476 35790000 35790000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44671 4213 40028 374352 295263 295263 1 RSIADSEESEAYK Unmodified 1483.6791 0.67906638 4240 Q9BY42 RTFDC1 Protein RTF2 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 3 1 27.948 23.654 2;3 0.00066401 31267 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.044 51.098 41015000 8190800 28854000 3970400 0 0 0 0 0 0 0 0 0 0 0 0 44672 4240 40029 374353;374354;374355;374356;374357 295264;295265;295266 295264 3 RSIFASPESVTGK Unmodified 1377.7252 0.72522871 563 O75940 SMNDC1 Survival of motor neuron-related-splicing factor 30 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 2 2 1 1 2 1 52.273 50.428 2;3 4.6961E-07 56120 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 101.71 66.2 176380000 54336000 0 0 0 0 0 22629000 0 0 0 13514000 0 0 33277000 52621000 44673 563 40030 374358;374359;374360;374361;374362;374363;374364;374365;374366 295267;295268;295269;295270;295271;295272;295273;295274;295275;295276;295277;295278 295276 11 RSIGASPNPFSVHTATAVPSGK Unmodified 2180.1338 0.13381473 895 P09884 POLA1 DNA polymerase alpha catalytic subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 2 2 1 2 2 2 2 2 2 57.881 58.154 3;4 8.635E-11 65247 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.088 60.041 299410000 0 0 0 0 0 36848000 15813000 0 12173000 34672000 40614000 55219000 29499000 24512000 50059000 44674 895 40031 374367;374368;374369;374370;374371;374372;374373;374374;374375;374376;374377;374378;374379;374380;374381;374382;374383 295279;295280;295281;295282;295283;295284;295285;295286;295287;295288;295289;295290;295291;295292;295293;295294;295295 295286 13 RSIGTGGIQDLK Unmodified 1243.6884 0.68844927 160 O00471 EXOC5 Exocyst complex component 5 yes yes 0 0 1 By MS/MS 2 0 1 1 47.906 40.192 3 0.0027909 56238 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.567 33.818 9284900 9284900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44675 160 40032 374384 295296 295296 1 RSIGYDDTDESHCAEHIESR Unmodified 2376.0037 0.0036647676 4020 Q99541 PLIN2 Perilipin-2 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 32.38 32.772 4 0.00010345 35926 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 46.353 44.926 38444000 0 0 0 0 0 7562700 0 0 5807400 0 0 12174000 0 0 12900000 44676 4020 40033 374385;374386;374387;374388 295297;295298;295299 295297 3 RSIHILPSSIK Unmodified 1249.7507 0.7506556 5065 Q9UQ13 SHOC2 Leucine-rich repeat protein SHOC-2 yes yes 0 0 1 By MS/MS By matching By MS/MS 10 0 3 1 1 1 47.901 48.412 3 0.0061023 55008 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 34.96 20.084 17519000 0 0 0 0 0 4874100 0 0 0 0 0 4358500 0 0 8286200 44677 5065 40034 374389;374390;374391 295300;295301 295300 2 RSILGLPPLPEDSIK Unmodified 1633.9403 0.94030686 2806 Q5VSL9 STRIP1 Striatin-interacting protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 90.367 82.237 3 0.007227 106774 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.297 40.436 8934700 8934700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44678 2806 40035 374392 295302 295302 1 RSIQEELQQLR Unmodified 1398.7579 0.75792582 2501 Q15149 PLEC Plectin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 64.083 64.311 3 0.0039893 72822 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.563 50.531 47616000 0 0 0 0 0 8294300 0 2831200 3563600 5962100 0 5422000 3773500 5788300 11981000 44679 2501 40036 374393;374394;374395;374396;374397;374398;374399;374400 295303;295304;295305;295306;295307 295304 4 RSIQFVDWCPTGFK Unmodified 1739.8454 0.84536062 1961;1962 P68363;P68366 TUBA1B;TUBA4A Tubulin alpha-1B chain;Tubulin alpha-4A chain no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 2 1 2 2 1 2 2 1 2 2 80.869 80.983 2;3 4.9033E-12 93230 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 135.02 118.1 340210000 0 0 0 5263800 0 33679000 2751800 23732000 22440000 10910000 12103000 19119000 10096000 16708000 183410000 44680 1961;1962 40037 374401;374402;374403;374404;374405;374406;374407;374408;374409;374410;374411;374412;374413;374414;374415;374416;374417;374418 295308;295309;295310;295311;295312;295313;295314;295315;295316 295309 6 RSLAFEEGSQSTTISSLSEK Unmodified 2156.0597 0.059706309 2269 Q13315 ATM Serine-protein kinase ATM yes yes 0 0 1 By MS/MS 2 0 1 1 72.563 64.324 3 0.004259 85258 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 35.17 27.347 32015000 32015000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44681 2269 40038 374419 295317 295317 1 RSLATMDSPPHQK Oxidation (M) 1482.7249 0.72491113 2427 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 0 1 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 11.585 11.15 3 1.8189E-07 17111 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 106.17 89.642 59548000 44702000 0 0 2124200 1134900 0 1723400 1655600 1603400 0 0 0 0 2731400 3873700 44682 2427 40039 374420;374421;374422;374423;374424;374425;374426;374427 295318;295319;295320;295321;295322 295321 3986 5 RSLATMDSPPHQK Unmodified 1466.73 0.72999651 2427 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 28.483 22.965 3 0.029895 32545 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 21.669 9.1085 48572000 48572000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44683 2427 40039 374428 295323 295323 1 RSLDPADERDDVLAK Unmodified 1698.8537 0.8536767 3594 Q8WXI9 GATAD2B Transcriptional repressor p66-beta yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 41.822 41.255 3 8.4071E-05 45968 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 80.706 61.877 442770000 0 16223000 30318000 22223000 16093000 26540000 27244000 24997000 0 41872000 41832000 50105000 46568000 32009000 66750000 44684 3594 40040 374429;374430;374431;374432;374433;374434;374435;374436;374437;374438;374439;374440;374441 295324;295325;295326;295327;295328;295329;295330;295331;295332;295333;295334 295330 8 RSLEVWGSQEALEEAK Unmodified 1830.9112 0.91119158 1148 P23025 XPA DNA repair protein complementing XP-A cells yes yes 0 0 1 By MS/MS 2 0 1 1 75.76 67.63 3 2.344E-08 89263 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.653 75.082 23069000 23069000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44685 1148 40041 374442 295335 295335 1 RSLFSEEAANEEK Unmodified 1508.7107 0.71070086 4524 Q9HD15 SRA1 Steroid receptor RNA activator 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 2 1 2 2 38.234 37.689 2;3 2.0601E-20 52486 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 153.54 108.37 112190000 42456000 0 3206600 3042400 0 4247700 0 0 2570800 6178900 12815000 10364000 0 7003700 20303000 44686 4524 40042 374443;374444;374445;374446;374447;374448;374449;374450;374451;374452;374453;374454;374455 295336;295337;295338;295339;295340;295341 295338 3 RSLGEPAAGEGSAK Unmodified 1328.6684 0.66844211 4166 Q9BUL9 RPP25 Ribonuclease P protein subunit p25 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching 5.43 3.96 4 3 2 2 1 1 1 16.405 14.425 2;3 0.0031639 13729 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 31.876 15.738 103810000 39802000 0 32256000 11054000 7087400 0 0 0 0 0 0 13614000 0 0 0 44687 4166 40043 374456;374457;374458;374459;374460;374461;374462 295342;295343;295344;295345;295346 295346 4 RSLGYAYVNFQQPADAER Unmodified 2084.0076 0.007551579 958;2268 Q13310;P11940 PABPC4;PABPC1 Polyadenylate-binding protein 4;Polyadenylate-binding protein 1 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 67.753 68.003 3 5.3785E-09 77194 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 80.238 74.274 39454000 0 0 0 0 0 0 0 0 6650600 0 0 0 4682700 7921300 20200000 44688 2268;958 40044 374463;374464;374465;374466;374467 295347;295348;295349;295350;295351 295350 4 RSLPSTSSTSSTK Unmodified 1337.6787 0.67867245 2199 Q12857 NFIA Nuclear factor 1 A-type yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 10.91 11.213 3 0.026801 9275 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 18.465 0 10542000 0 0 0 0 0 0 0 0 0 0 0 0 0 3746600 6795100 44689 2199 40045 374468;374469 295352;295353 295352 2 RSLRPDPNFDALISK Unmodified 1727.9319 0.93186744 2130;4014 Q06587;Q99496 RING1;RNF2 E3 ubiquitin-protein ligase RING1;E3 ubiquitin-protein ligase RING2 no no 0 0 2 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 67.597 67.847 4 0.018575 76740 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.301 23.643 18678000 0 0 0 0 0 0 0 0 3160800 0 0 0 2413200 2179300 10925000 44690 2130;4014 40046 374470;374471;374472;374473 295354 295354 1 RSLSEQPVMDTATATEQAK Unmodified 2062.0001 8.29396E-05 1075 P18615 NELFE Negative elongation factor E yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 46.85 46.012 3 7.7315E-42 51855 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 102.33 92.368 360220000 0 55257000 28451000 13464000 15271000 24908000 23282000 18646000 20364000 29891000 20674000 27527000 19466000 18992000 44026000 44691 1075 40047 374474;374475;374476;374477;374478;374479;374480;374481;374482;374483;374484;374485;374486;374487;374488 295355;295356;295357;295358;295359;295360;295361;295362;295363;295364;295365;295366;295367;295368;295369;295370;295371;295372;295373 295370 19 RSLSEQPVMDTATATEQAK Oxidation (M) 2077.995 0.99499756 1075 P18615 NELFE Negative elongation factor E yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 2 6 2 1 1 1 1 1 1 35.285 34.654 3 9.0218E-24 43785 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 114.99 102.67 95365000 0 0 24852000 0 0 0 11047000 0 6753900 13313000 11532000 0 11653000 0 16215000 44692 1075 40047 374489;374490;374491;374492;374493;374494;374495;374496 295374;295375;295376;295377;295378;295379;295380;295381 295380 1547 8 RSLTVSDDAESSEPERK Unmodified 1904.9076 0.90756276 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 23.773 23.259 3 1.8718E-51 33239 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 142.72 126.6 204940000 29391000 0 20630000 0 6167000 9491300 9706000 7986000 0 13539000 16624000 27601000 17316000 19293000 27193000 44693 3443 40048 374497;374498;374499;374500;374501;374502;374503;374504;374505;374506;374507;374508;374509 295382;295383;295384;295385;295386;295387;295388;295389;295390;295391;295392;295393;295394;295395;295396 295387 13 RSMGGAAIAPPTSLVEK Unmodified 1683.8978 0.89779012 3874 Q96I25 RBM17 Splicing factor 45 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 64.485 63.585 3 0.0073545 86546 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.633 30.718 106890000 28412000 0 0 0 0 0 0 0 0 9768900 10989000 16548000 7342700 9977200 23849000 44694 3874 40049 374510;374511;374512;374513;374514;374515;374516 295397;295398;295399;295400;295401;295402;295403;295404 295399 7 RSMGGAAIAPPTSLVEK Oxidation (M) 1699.8927 0.89270474 3874 Q96I25 RBM17 Splicing factor 45 yes yes 0 1 1 By MS/MS 2 0 1 1 66.763 58.468 3 0.00095818 78363 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.773 37.346 35841000 35841000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44695 3874 40049 374517 295405 295405 5386 1 RSMGLTLAESELTK Unmodified 1534.8025 0.80249275 4778 Q9NZN5 ARHGEF12 Rho guanine nucleotide exchange factor 12 yes yes 0 0 1 By MS/MS 2 0 1 1 77.579 69.449 3 0.0013272 91407 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.128 50.573 16072000 16072000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44696 4778 40050 374518 295406 295406 1 RSNAAPLSNTK Unmodified 1157.6153 0.61528433 3631 Q92576 PHF3 PHD finger protein 3 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 8.8721 8.5612 3 0.0070691 6820 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 42.083 24.61 44409000 18373000 0 0 3273500 0 1695200 0 1360400 2090800 0 0 8683900 2491500 2130600 4309400 44697 3631 40051 374519;374520;374521;374522;374523;374524;374525;374526;374527 295407;295408 295408 2 RSNEETDDYGK Unmodified 1312.5531 0.55313758 4752 Q9NYV4 CDK12 Cyclin-dependent kinase 12 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 7.3225 4.0217 2 0.0024995 6136 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 111.06 90.357 7757700 0 7757700 0 0 0 0 0 0 0 0 0 0 0 0 0 44698 4752 40052 374528;374529 295409 295409 1 RSPAQQESNQAEASK Unmodified 1629.7707 0.77067535 2147 Q08050 FOXM1 Forkhead box protein M1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.4168 6.5416 3 2.6635E-24 4732 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 124.25 117.62 87410000 0 0 0 4104700 4775400 4656700 4860400 5992900 7671900 5525400 11743000 11995000 9294700 7567300 9222500 44699 2147 40053 374530;374531;374532;374533;374534;374535;374536;374537;374538;374539;374540;374541 295410;295411;295412;295413;295414;295415;295416;295417;295418;295419;295420 295414 11 RSPGGGSEANGLALVSGFK Unmodified 1802.9275 0.92751034 616 O95049 TJP3 Tight junction protein ZO-3 yes yes 0 0 1 By MS/MS By matching 10 0 2 1 1 72.111 72.365 3 0.0067652 83386 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 28.418 18.887 17588000 0 0 0 0 0 0 0 0 0 8321400 0 0 0 0 9266600 44700 616 40054 374542;374543 295421 295421 1 RSPGPGPSQSPR Unmodified 1221.6214 0.62143234 4801 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 7.997 8.1199 3 0.00099303 5981 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 72.958 61.425 49604000 0 0 0 3072700 2340100 2612300 2657200 2531500 0 4093300 12686000 5433300 5813600 3002500 5361500 44701 4801 40055 374544;374545;374546;374547;374548;374549;374550;374551;374552;374553;374554 295422;295423;295424;295425;295426;295427;295428 295423 7 RSPLSDPPSQDPTPAATPETPPVISAVVHATDEEK Unmodified 3635.7955 0.7954997 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 0 1 By MS/MS 2 0 1 1 87.719 85.285 4 0.00070273 103277 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 32.233 30.444 5204500 0 0 5204500 0 0 0 0 0 0 0 0 0 0 0 0 44702 645 40056 374555 295429;295430 295429 2 RSPMCNQPSINK Unmodified 1430.6759 0.67585245 2159 Q08499 PDE4D cAMP-specific 3',5'-cyclic phosphodiesterase 4D yes yes 0 0 1 By MS/MS 10 0 1 1 21.743 22.247 3 0.038874 22894 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 17.786 6.7406 13222000 0 0 0 0 0 0 0 0 0 0 13222000 0 0 0 0 44703 2159 40057 374556 295431 295431 1 RSPPGAGGSPPGAAVAPSALQLSPAAAAAAAHR Unmodified 2931.5427 0.54273509 1983 P78415 IRX3 Iroquois-class homeodomain protein IRX-3 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 74.947 75.022 4 6.3745E-20 86543 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 45.22 42.635 56209000 0 0 0 1438300 0 5900500 3828700 5276000 0 8657200 0 10675000 4746400 3678600 12008000 44704 1983 40058 374557;374558;374559;374560;374561;374562;374563;374564;374565 295432;295433;295434;295435;295436;295437;295438 295433 6 RSPPIPLAK Unmodified 977.6022 0.60220045 982 P13667 PDIA4 Protein disulfide-isomerase A4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.239 38.418 2 0.027418 42557 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 95.311 38.134 563320000 0 0 0 34907000 27576000 22417000 37441000 37399000 26328000 36897000 84915000 44806000 49490000 38084000 123060000 44705 982 40059 374566;374567;374568;374569;374570;374571;374572;374573;374574;374575;374576;374577 295439;295440 295439 0 RSPQDVEVLK Unmodified 1169.6404 0.64043645 4077 Q99996 AKAP9 A-kinase anchor protein 9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 32.295 32.533 2 0.030631 35486 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 75.378 27.775 37692000 0 0 0 0 2308600 2425700 1874400 1992200 1455200 2947600 4068700 5847400 2758400 3109200 8904600 44706 4077 40060 374578;374579;374580;374581;374582;374583;374584;374585;374586;374587;374588 295441 295441 1 RSPQQTVPYVVPLSPK Unmodified 1794.9992 0.99921872 5073 Q9UQR0 SCML2 Sex comb on midleg-like protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.275 70.349 3 0.00042612 80775 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 51.495 44.767 58970000 0 0 0 3728800 3365800 5056400 3774100 3497500 3476300 4181400 6251500 7664100 4747600 4871700 8354900 44707 5073 40061 374589;374590;374591;374592;374593;374594;374595;374596;374597;374598;374599;374600 295442;295443;295444;295445;295446;295447;295448;295449;295450;295451;295452 295451 11 RSPRPQDLIR Unmodified 1236.7051 0.70510239 4895 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.089 35.27 3 0.0077827 38869 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 112.15 87.856 646540000 0 0 0 31737000 13114000 60109000 51925000 61259000 50244000 48417000 52995000 4328600 101510000 54824000 116090000 44708 4895 40062 374601;374602;374603;374604;374605;374606;374607;374608;374609;374610;374611;374612 295453;295454;295455;295456;295457;295458;295459 295453 1 RSPSAPAATSSASSSTSSYK Unmodified 1928.9076 0.90756276 2518 Q15345 LRRC41 Leucine-rich repeat-containing protein 41 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.8 3.92 2 3 1 1 1 1 1 22.519 21.151 3 1.2548E-08 28966 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.98 77.012 138980000 88718000 0 10426000 0 0 0 0 0 0 0 0 0 9769700 13147000 16917000 44709 2518 40063 374613;374614;374615;374616;374617 295460;295461;295462;295463;295464;295465 295461 5 RSPSKPLPEVTDEYK Unmodified 1744.8996 0.89956426 811 P05455 SSB Lupus La protein yes yes 0 0 2 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 38.64 39.384 3 0.012558 42707 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.045 37.006 20182000 0 0 0 0 0 0 0 0 0 0 0 10374000 0 0 9808300 44710 811 40064 374618;374619;374620 295466;295467 295466 2 RSPTESVNTPVGK Unmodified 1370.7154 0.7153923 3590 Q8WXG6 MADD MAP kinase-activating death domain protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 27.955 23.639 3 3.8675E-14 33445 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.26 92.886 75216000 45988000 15594000 13634000 0 0 0 0 0 0 0 0 0 0 0 0 44711 3590 40065 374621;374622;374623;374624 295468;295469;295470;295471 295470 3 RSPVPAQIAITVPK Unmodified 1475.8824 0.88239805 329 O43432 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 70.835 70.765 3 0.024735 81235 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 17.958 12.474 17881000 0 0 0 2775200 0 5579000 0 5526300 4000100 0 0 0 0 0 0 44712 329 40066 374625;374626;374627;374628 295472;295473 295473 2 RSPYAGLQLGAAK Unmodified 1330.7357 0.73573382 2370 Q14134 TRIM29 Tripartite motif-containing protein 29 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.425 49.566 3 0.00012347 56950 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 63.181 51.598 182000000 0 0 0 21396000 11270000 23589000 10661000 0 7931500 24620000 15657000 24456000 0 13137000 29280000 44713 2370 40067 374629;374630;374631;374632;374633;374634;374635;374636;374637;374638;374639;374640 295474;295475;295476;295477;295478;295479;295480;295481;295482;295483;295484;295485;295486;295487 295486 14 RSQAGVSSGAPPGR Unmodified 1325.68 0.68000985 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 2 1 1 1 1 1 1 1 1 1 1 10.488 10.602 3 0.0011873 9489 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 36.445 24.579 37653000 0 0 0 2219100 3051700 2705200 4723600 2084400 1818700 2646300 2686100 4740700 3530700 3264600 4182400 44714 2459 40068 374641;374642;374643;374644;374645;374646;374647;374648;374649;374650;374651;374652;374653 295488;295489;295490;295491;295492;295493;295494;295495;295496;295497;295498;295499 295490 8 RSQANGAGALSYVSPNTSK Unmodified 1906.9497 0.94970235 662 O95453 PARN Poly(A)-specific ribonuclease PARN yes yes 0 0 1 By MS/MS 2 0 1 1 52.248 44.233 3 0.00052078 61070 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.487 46.022 7862300 7862300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44715 662 40069 374654 295500 295500 1 RSQDLEQAK Unmodified 1073.5465 0.54653606 2765 Q5T0F9 CC2D1B Coiled-coil and C2 domain-containing protein 1B yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 7.336 4.4697 2 0.0067788 6375 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 144.09 100.23 32033000 19161000 0 12872000 0 0 0 0 0 0 0 0 0 0 0 0 44716 2765 40070 374655;374656 295501 295501 0 RSQEDEISSPVNK Unmodified 1487.7216 0.72159989 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.4 2.04 1 1 23 2 2 2 2 2 2 2 2 2 2 1 2 2 24.928 24.762 2;3 0.0058236 26890 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 86.624 49.931 179200000 0 10252000 0 15258000 12847000 15427000 14711000 12069000 10439000 15863000 10163000 17389000 3469700 17496000 23812000 44717 2804 40071 374657;374658;374659;374660;374661;374662;374663;374664;374665;374666;374667;374668;374669;374670;374671;374672;374673;374674;374675;374676;374677;374678;374679;374680;374681 295502;295503;295504;295505;295506;295507;295508;295509;295510;295511;295512;295513;295514;295515;295516 295516 12 RSQIYGSR Unmodified 965.50428 0.50427732 973 P12956 XRCC6 X-ray repair cross-complementing protein 6 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 8.0144 8.1486 2 0.029502 5913 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 146.79 78.805 238320000 0 0 0 19899000 9781400 17281000 0 17203000 17848000 18686000 59174000 0 23441000 16006000 39000000 44718 973 40072 374682;374683;374684;374685;374686;374687;374688;374689;374690;374691 295517;295518 295517 1 RSQPEPGVADEDQTA Unmodified 1598.7172 0.7172428 4166 Q9BUL9 RPP25 Ribonuclease P protein subunit p25 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 25.247 25.486 2 6.6226E-06 27063 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 85.288 76.33 101670000 0 0 0 0 6824300 8086000 5892300 5870400 5531500 8044600 9718100 13247000 8827300 9045700 20585000 44719 4166 40073 374692;374693;374694;374695;374696;374697;374698;374699;374700;374701;374702;374703 295519;295520;295521;295522;295523;295524;295525;295526;295527;295528;295529;295530;295531 295520 13 RSQSFTHSPSGDPK Unmodified 1529.7223 0.7222686 5200 Q9Y4F5 CEP170B Centrosomal protein of 170 kDa protein B yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 11.77 11.059 3 0.0053827 17017 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.958 31.679 25162000 7869500 0 0 3285500 3030100 4125700 4296800 0 2554300 0 0 0 0 0 0 44720 5200 40074 374704;374705;374706;374707;374708;374709;374710 295532;295533;295534;295535 295533 4 RSRPTSEGSDIESTEPQK Unmodified 2002.9556 0.95557559 2684 Q4G0J3 LARP7 La-related protein 7 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 2 5 2 1 1 1 1 1 17.897 16.794 3;4 2.0045E-19 25017 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.75 97.152 98467000 77134000 0 0 0 0 0 0 0 0 0 3133100 3938700 4645700 3696600 5918700 44721 2684 40075 374711;374712;374713;374714;374715;374716;374717 295536;295537;295538;295539;295540;295541;295542 295538 7 RSRPTSFADELAAR Unmodified 1575.8118 0.8117523 2840;5195 Q641Q2;Q9Y4E1 FAM21A;FAM21C WASH complex subunit FAM21A;WASH complex subunit FAM21C no no 0 0 2 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 45.069 45.46 3 0.033375 51149 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 46.746 34.77 69985000 0 0 0 0 0 6628900 0 0 5618000 0 6792100 9861200 16124000 9281300 15680000 44722 2840;5195 40076 374718;374719;374720;374721;374722;374723;374724 295543 295543 1 RSRVAPAEPQEAPDSTAAGGSASK Unmodified 2339.1466 0.14656426 2672 Q3LXA3 DAK Bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase (cyclizing);ATP-dependent dihydroxyacetone kinase;FAD-AMP lyase (cyclizing) yes yes 0 0 2 By MS/MS 2 0 1 1 30.406 24.687 4 3.0638E-14 34693 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.786 72.697 120120000 120120000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44723 2672 40077 374725 295544 295544 1 RSRVEEPSGAVTTPAGVIAAAGPQGPGTGE Unmodified 2818.4209 0.4209482 2019 P85037 FOXK1 Forkhead box protein K1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 2 1 1 1 1 1 1 1 1 1 73.25 71.922 3 7.1315E-49 91586 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 100.68 97.9 413220000 285930000 0 0 0 0 9767700 9266900 0 10065000 22354000 15493000 17699000 10011000 9860300 22773000 44724 2019 40078 374726;374727;374728;374729;374730;374731;374732;374733;374734;374735;374736 295545;295546;295547;295548;295549;295550 295546 5 RSSDGSLSHEEDLAK Unmodified 1629.7594 0.75944196 2239 Q13136 PPFIA1 Liprin-alpha-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 22.375 21.804 3 0.00043218 21799 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 42.191 30.92 88511000 5475700 0 9314500 5859500 0 5550300 6757500 0 6023200 6779500 9381600 11475000 0 13356000 8538600 44725 2239 40079 374737;374738;374739;374740;374741;374742;374743;374744;374745;374746;374747 295551;295552;295553;295554;295555;295556;295557;295558;295559 295558 8 RSSGAAPAPASASAPAPVPGGEAER Unmodified 2260.1196 0.11962122 4848 Q9UBP0 SPAST Spastin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 41.208 41.324 3 5.5036E-15 46192 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.3 61.66 65003000 0 0 0 5917700 3912800 8798400 7232900 0 6380900 0 7822700 0 7726200 4788400 12423000 44726 4848 40080 374748;374749;374750;374751;374752;374753;374754;374755;374756 295560;295561;295562;295563;295564;295565;295566;295567;295568;295569;295570 295561 11 RSSGFISELPSEEGK Unmodified 1621.7948 0.79476484 2833 Q5VZK9 LRRC16A Leucine-rich repeat-containing protein 16A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58.422 57.068 3 0.00011007 78745 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.909 89.018 421030000 247710000 29562000 13966000 9458100 8050900 15629000 9566800 7682000 6925900 9065000 9766900 10656000 13560000 11874000 17559000 44727 2833 40081 374757;374758;374759;374760;374761;374762;374763;374764;374765;374766;374767;374768;374769;374770;374771;374772 295571;295572;295573;295574;295575;295576;295577;295578;295579;295580;295581;295582;295583;295584;295585;295586;295587;295588;295589 295581 17 RSSITEPEGPGGPNIQK Unmodified 1765.8959 0.89587586 3911 Q96KQ4 PPP1R13B Apoptosis-stimulating of p53 protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 42.682 37.444 3 0.0045549 51206 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 41.871 17.68 12503000 10495000 0 2008700 0 0 0 0 0 0 0 0 0 0 0 0 44728 3911 40082 374773;374774 295590 295590 1 RSSITEPEGPNGPNIQK Unmodified 1822.9173 0.91733959 2333 Q13625 TP53BP2 Apoptosis-stimulating of p53 protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 38.17 37.479 3 1.2334E-07 41303 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 83.966 72.275 114010000 33413000 0 7937200 5376000 6727800 5435400 6117400 7266400 5910800 10822000 6338200 0 6584700 5648100 6434000 44729 2333 40083 374775;374776;374777;374778;374779;374780;374781;374782;374783;374784;374785;374786;374787 295591;295592;295593;295594;295595;295596;295597;295598;295599;295600;295601;295602;295603;295604;295605 295598 15 RSSLPLDHGSPAQENPESEK Unmodified 2177.0349 0.034888542 2830 Q5VZ89 DENND4C DENN domain-containing protein 4C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 2 2 2 2 1 1 1 1 35.459 35.487 3;4 8.6475E-06 39171 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 55.383 47.486 92198000 0 0 0 9690500 10694000 0 13095000 14386000 0 11502000 10767000 8909900 13153000 0 0 44730 2830 40084 374788;374789;374790;374791;374792;374793;374794;374795;374796;374797;374798;374799 295606;295607;295608;295609;295610;295611;295612;295613;295614;295615;295616 295607 11 RSSNPPARSQSSDTEQQSPTSGGGK Unmodified 2545.1753 0.1752982 1166 P23588 EIF4B Eukaryotic translation initiation factor 4B yes yes 0 0 2 By MS/MS 2 0 1 1 10.831 6.9573 3 8.2339E-05 11059 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.726 46.975 146420000 146420000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44731 1166 40085 374800 295617;295618 295617 2 RSSPAAFINPPIGTVTPALK Unmodified 2036.1419 0.14186022 4243 Q9BY77 POLDIP3 Polymerase delta-interacting protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.644 81.705 3 3.4854E-05 94510 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 52.541 48.937 227730000 0 0 0 2979200 7994900 21040000 13795000 19266000 18293000 26987000 18629000 25733000 13102000 14754000 45151000 44732 4243 40086 374801;374802;374803;374804;374805;374806;374807;374808;374809;374810;374811;374812 295619;295620;295621;295622;295623;295624;295625;295626;295627;295628;295629 295620 9 RSSPPSAGNSPSSLK Unmodified 1470.7427 0.74266969 1795 P57682 KLF3 Krueppel-like factor 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 17.5 17.653 3 0.00058825 18145 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 35.711 23.545 58755000 0 0 0 4244200 2991100 3869800 7579900 5455000 5905400 5887700 0 6298800 4579300 4020000 7923600 44733 1795 40087 374813;374814;374815;374816;374817;374818;374819;374820;374821;374822;374823 295630;295631;295632;295633;295634;295635;295636;295637;295638;295639;295640;295641 295633 12 RSSPSARPPDVPGQQPQAAK Unmodified 2073.0715 0.071548819 3898 Q96JP5 ZFP91 E3 ubiquitin-protein ligase ZFP91 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 28.501 28.693 3 0.0036351 30110 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 47.68 40.487 69725000 0 0 0 0 3019500 3899500 5274300 2115700 3233300 8185700 9615100 8926000 16353000 9102800 0 44734 3898 40088 374824;374825;374826;374827;374828;374829;374830;374831;374832;374833 295642;295643;295644;295645;295646 295645 4 RSSSAEESGQDVLENTFSQK Unmodified 2198.0087 0.0087333705 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 60.835 60.485 3 2.8755E-09 68890 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 72.585 64.593 46564000 0 0 6191200 2169600 0 0 4453700 4235200 0 0 7970500 0 5731500 6320200 9491700 44735 2446 40089 374834;374835;374836;374837;374838;374839;374840;374841;374842 295647;295648;295649;295650;295651;295652;295653;295654;295655;295656;295657 295650 11 RSSSEDAESLAPR Unmodified 1403.6641 0.66408501 2684 Q4G0J3 LARP7 La-related protein 7 yes yes 0 0 1 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 2 1 1 1 24.285 24.419 3 0.00053252 24690 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.287 50.755 47869000 0 0 0 6466200 5146200 0 0 6584600 3396200 9179800 0 0 0 6733700 10362000 44736 2684 40090 374843;374844;374845;374846;374847;374848;374849;374850;374851;374852 295658;295659;295660;295661;295662;295663 295660 6 RSSSEDAESLAPRSK Unmodified 1618.7911 0.79107644 2684 Q4G0J3 LARP7 La-related protein 7 yes yes 0 0 2 By MS/MS 2 0 1 1 23.344 18.368 3 0.0030028 26232 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 59.345 3.0058 93485000 93485000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44737 2684 40091 374853 295664 295664 0 RSSTGSYEERVK Unmodified 1397.6899 0.68990583 4915 Q9UHY8 FEZ2 Fasciculation and elongation protein zeta-2 yes yes 0 0 2 By MS/MS 2 0 1 1 14.158 10.109 3 0.013658 15227 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.035 52.999 64582000 64582000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44738 4915 40092 374854 295665 295665 1 RSSTLSQLPGDK Unmodified 1287.6783 0.67827852 391 O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS 4.67 3.77 4 2 2 2 1 1 32.733 29.719 2;3 0.00084809 42331 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.015 64.941 277090000 248090000 0 10015000 0 0 0 0 0 0 0 0 6333200 0 0 12650000 44739 391 40093 374855;374856;374857;374858;374859;374860 295666;295667;295668;295669;295670;295671;295672 295670 6 RSSVVSPSHPPPAPPLGSPPGPK Unmodified 2244.2015 0.20150036 5296 Q9Y6W5 WASF2 Wiskott-Aldrich syndrome protein family member 2 yes yes 0 0 1 By MS/MS 2 0 1 1 64.017 55.738 4 0.0047882 75257 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 28.675 22.861 8241200 8241200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44740 5296 40094 374861 295673 295673 0 RSTQESLTAGGTDLK Unmodified 1562.79 0.79001381 2518 Q15345 LRRC41 Leucine-rich repeat-containing protein 41 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 31.369 31.558 3 0.0015423 34937 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 30.172 19.514 47384000 0 0 0 0 3313000 6072900 3689400 4618700 3159400 5160100 4748300 0 5303800 4653300 6665200 44741 2518 40095 374862;374863;374864;374865;374866;374867;374868;374869;374870;374871 295674;295675;295676;295677;295678;295679;295680;295681;295682 295682 9 RSTQGVTLTDLQEAEK Unmodified 1774.9061 0.9061062 232 O14974 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 54.751 54.764 3 2.2082E-06 62215 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 61.495 44.214 78921000 0 0 0 6967800 7398600 9257400 9947300 8623300 4675500 12210000 13419000 0 6422900 0 0 44742 232 40096 374872;374873;374874;374875;374876;374877;374878;374879;374880 295683;295684;295685;295686;295687;295688;295689;295690;295691;295692;295693;295694;295695 295692 13 RSTSPIIGSPPVR Unmodified 1365.7728 0.7728476 3133 Q86TB9 PATL1 Protein PAT1 homolog 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 44.451 44.623 3 9.1081E-05 50080 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 82.202 75.516 421660000 0 0 0 28988000 28125000 27736000 36658000 38959000 27981000 33311000 32756000 43533000 47847000 33474000 42295000 44743 3133 40097 374881;374882;374883;374884;374885;374886;374887;374888;374889;374890;374891;374892 295696;295697;295698;295699;295700;295701;295702;295703;295704;295705;295706;295707;295708;295709;295710;295711;295712;295713;295714;295715 295711 20 RSTSSFSCLSR Unmodified 1286.6037 0.60373336 79 CON__P35908v2;P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.889 28.087 3 0.016754 30462 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 54.005 43.817 + 628080000 0 0 0 114350000 37614000 48533000 43622000 28652000 43377000 47631000 48013000 54014000 94631000 45137000 22498000 44744 79 40098 374893;374894;374895;374896;374897;374898;374899;374900;374901;374902;374903;374904 295716;295717;295718;295719;295720 295718 4 RSTSVNLNQASGAVGSAK Unmodified 1745.902 0.90202387 4815 Q9P2D3 HEATR5B HEAT repeat-containing protein 5B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 36.022 36.269 3 0.00094746 40143 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 30.336 19.28 53250000 0 0 0 3899900 0 4366000 4089400 4858700 3291000 0 5315800 5826300 6532100 7083600 7986700 44745 4815 40099 374905;374906;374907;374908;374909;374910;374911;374912;374913;374914 295721;295722;295723;295724;295725;295726;295727;295728;295729 295721 9 RSTTENFFLK Unmodified 1241.6404 0.64043645 5171 Q9Y3P9 RABGAP1 Rab GTPase-activating protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 53.14 52.515 2 0.0051941 76641 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 117.31 82.016 100730000 36378000 0 0 0 0 12309000 0 4305500 5751900 7521400 7689100 7908800 6655100 0 12208000 44746 5171 40100 374915;374916;374917;374918;374919;374920;374921;374922;374923 295730;295731;295732 295732 3 RSTTLDAGNIK Unmodified 1174.6306 0.63060004 494 O75400 PRPF40A Pre-mRNA-processing factor 40 homolog A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.41 2.1 2 25 2 2 2 2 2 2 2 2 2 2 2 2 3 22.893 22.873 2;3 0.0001724 23124 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 123.63 52.276 1845400000 0 0 43039000 75157000 73350000 83474000 127080000 133210000 120120000 183500000 167740000 219510000 169790000 251700000 197720000 44747 494 40101 374924;374925;374926;374927;374928;374929;374930;374931;374932;374933;374934;374935;374936;374937;374938;374939;374940;374941;374942;374943;374944;374945;374946;374947;374948;374949;374950 295733;295734;295735;295736;295737;295738;295739;295740;295741;295742;295743;295744;295745;295746;295747;295748;295749;295750;295751;295752;295753 295741 12 RSTYNYSLPITVK Unmodified 1540.8249 0.82494275 5244 Q9Y5Q8 GTF3C5 General transcription factor 3C polypeptide 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 2 1 2 1 1 1 2 2 1 2 1 2 68.793 68.866 2;3 0.0023303 78938 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 45.992 40.839 176690000 0 0 0 7533400 4979800 22055000 8160200 9197200 10243000 17641000 20308000 15129000 15800000 13132000 32515000 44748 5244 40102 374951;374952;374953;374954;374955;374956;374957;374958;374959;374960;374961;374962;374963;374964;374965;374966;374967;374968 295754;295755;295756;295757;295758;295759;295760;295761;295762 295759 9 RSVCPGGSSPGSSSGGGR Unmodified 1647.7383 0.73832937 2706 Q53LP3 SOWAHC Ankyrin repeat domain-containing protein SOWAHC yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 8.7176 8.8509 3 4.5287E-06 7275 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.764 53.04 59193000 0 0 0 4541900 3409500 3521000 3313900 1936000 1932100 3437600 14715000 7780200 4932300 3030300 6642600 44749 2706 40103 374969;374970;374971;374972;374973;374974;374975;374976;374977;374978;374979;374980 295763;295764;295765;295766;295767;295768;295769;295770;295771;295772;295773 295771 11 RSVGELPSTVESLQK Unmodified 1628.8733 0.87334951 2135 Q07065 CKAP4 Cytoskeleton-associated protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.008 58.123 3 0.00073574 66001 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 48.216 36.603 174180000 0 0 0 12090000 8509700 13426000 13139000 13232000 8073500 17017000 13905000 25434000 17338000 15015000 17002000 44750 2135 40104 374981;374982;374983;374984;374985;374986;374987;374988;374989;374990;374991;374992 295774;295775;295776;295777;295778;295779 295775 5 RSVNVNAASGGVQNSGIVR Unmodified 1883.9926 0.99257022 3460 Q8NHV4 NEDD1 Protein NEDD1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 42.448 42.418 3 2.9619E-13 46424 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 81.357 59.516 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44751 3460 40105 374993;374994;374995;374996;374997;374998 295780;295781;295782;295783;295784;295785 295782 6 RSVSDNDIRK Unmodified 1188.6211 0.62109799 1755 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 7.0697 7.2824 3 2.5642E-10 5328 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 138.76 119.52 286120000 0 0 0 0 0 0 15025000 0 0 0 112030000 24417000 0 45289000 89358000 44752 1755 40106 374999;375000;375001;375002;375003 295786;295787;295788;295789;295790 295788 4 RSVVDSLDIESMTIEDEYSGPK Oxidation (M) 2485.153 0.15301435 1709 P53041 PPP5C Serine/threonine-protein phosphatase 5 yes yes 0 1 1 By MS/MS By MS/MS 2 0 3 2 1 85.775 79.54 3 1.8101E-40 102240 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 123.99 116.88 63095000 60127000 0 2968600 0 0 0 0 0 0 0 0 0 0 0 0 44753 1709 40107 375004;375005;375006 295791;295792;295793 295791 2765 2 RSVVDSLDIESMTIEDEYSGPK Unmodified 2469.1581 0.15809972 1709 P53041 PPP5C Serine/threonine-protein phosphatase 5 yes yes 0 0 1 By MS/MS 2 0 1 1 90.057 81.927 3 3.4457E-05 106380 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.833 62.91 68597000 68597000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44754 1709 40107 375007 295794 295794 1 RSVVSFDK Unmodified 936.50288 0.50288033 2532 Q15424 SAFB Scaffold attachment factor B1 yes yes 0 0 1 By MS/MS 2 0 1 1 33.539 27.503 2 0.014542 38254 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 128.12 17.811 152230000 152230000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44755 2532 40108 375008 295795;295796;295797;295798 295796 4 RSVYIDARDEELEK Unmodified 1721.8584 0.85842773 3536 Q8WU90 ZC3H15 Zinc finger CCCH domain-containing protein 15 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 42.718 41.251 3 0.013065 44730 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.294 20.36 55915000 28876000 0 0 0 0 0 0 0 0 0 7708600 7275400 0 0 12056000 44756 3536 40109 375009;375010;375011;375012 295799;295800 295799 2 RSWGQQAQEYQEQK Unmodified 1764.818 0.81795989 2833 Q5VZK9 LRRC16A Leucine-rich repeat-containing protein 16A yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 29.743 30.174 3 0.00015472 31693 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.073 22.267 8618900 0 0 0 0 0 0 0 2870500 0 0 0 0 0 0 5748300 44757 2833 40110 375013;375014 295801 295801 1 RSYEDDDDMDLQPNK Unmodified 1839.7581 0.75812133 4143 Q9BTE3 MCMBP Mini-chromosome maintenance complex-binding protein yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 43.35 37.379 3 0.0018165 48869 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 39.074 33.17 42595000 21910000 20685000 0 0 0 0 0 0 0 0 0 0 0 0 0 44758 4143 40111 375015;375016 295802;295803;295804 295802 3 RSYEDDDDMDLQPNK Oxidation (M) 1855.753 0.75303596 4143 Q9BTE3 MCMBP Mini-chromosome maintenance complex-binding protein yes yes 0 1 1 By MS/MS 2 0 1 1 30.398 24.68 3 0.0024746 34704 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.899 45.51 33664000 33664000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44759 4143 40111 375017 295805;295806 295805 5639 2 RSYEQHNGVDGNMK Unmodified 1633.7267 0.72670205 2272 Q13330 MTA1 Metastasis-associated protein MTA1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 11.814 11.547 3 1.2486E-09 17189 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.466 77.828 32670000 15695000 0 0 1169100 0 1472800 0 1477500 1144600 1507200 0 2358900 2700400 1968400 3175700 44760 2272 40112 375018;375019;375020;375021;375022;375023;375024;375025;375026;375027 295807;295808;295809;295810;295811;295812;295813 295810 7 RSYEQHNGVDGNMK Oxidation (M) 1649.7216 0.72161667 2272 Q13330 MTA1 Metastasis-associated protein MTA1 yes yes 0 1 1 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 6.7535 6.1855 3 0.00031187 8167 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.768 70.632 44972000 35766000 0 0 1314700 1240900 0 1637900 0 0 2623100 0 2390100 0 0 0 44761 2272 40112 375028;375029;375030;375031;375032;375033 295814;295815 295814 3701 2 RSYESVEGNIK Unmodified 1280.6361 0.63607935 488 O75376 NCOR1 Nuclear receptor corepressor 1 yes yes 0 0 1 By matching By MS/MS 2 0 3 1 2 31.502 27.359 2;3 0.028448 34777 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 46.592 25.22 48417000 24805000 0 23612000 0 0 0 0 0 0 0 0 0 0 0 0 44762 488 40113 375034;375035;375036 295816;295817;295818 295818 2 RSYQFWDTQPVPK Unmodified 1650.8154 0.8154407 1280 P30419 NMT1 Glycylpeptide N-tetradecanoyltransferase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 69.236 66.771 3 0.014741 89417 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 30.567 23.035 40972000 19873000 0 0 0 0 0 0 0 0 0 0 0 0 4134400 16964000 44763 1280 40114 375037;375038;375039 295819;295820;295821 295820 3 RSYSAGNASQLEQLSR Unmodified 1765.8707 0.87072375 2429 Q14678 KANK1 KN motif and ankyrin repeat domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 46.67 46.932 3 0.00098536 52681 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 45.876 32.159 48148000 0 0 0 0 2578000 0 2852000 0 2268600 8878300 7171300 8165500 4709600 4960800 6564200 44764 2429 40115 375040;375041;375042;375043;375044;375045;375046;375047;375048 295822;295823;295824;295825;295826;295827;295828 295825 7 RSYSSPDITQAIQEEEK Unmodified 1979.9436 0.94361392 1420 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 yes yes 0 0 1 By MS/MS 2 0 1 1 65.468 61.715 3 1.9834E-09 76464 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 79.013 70.174 11721000 0 0 11721000 0 0 0 0 0 0 0 0 0 0 0 0 44765 1420 40116 375049 295829;295830 295829 2 RSYVTMTATK Unmodified 1156.591 0.59104341 4896 Q9UHD1 CHORDC1 Cysteine and histidine-rich domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 25.013 24.762 2 0.00033527 35326 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 132.44 83.018 319070000 179520000 0 0 4224300 3702300 9996000 6799000 6191000 4583100 9424100 7761900 14344000 9860200 11596000 51075000 44766 4896 40117 375050;375051;375052;375053;375054;375055;375056;375057;375058;375059;375060;375061;375062 295831;295832;295833;295834;295835;295836;295837;295838;295839 295835 5 RSYVTMTATK Oxidation (M) 1172.586 0.58595803 4896 Q9UHD1 CHORDC1 Cysteine and histidine-rich domain-containing protein 1 yes yes 0 1 1 By MS/MS 2 0 2 2 15.73 11.617 2 0.012325 17473 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.943 57.067 104630000 104630000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44767 4896 40117 375063;375064 295840;295841 295840 6252 1 RTAAENDFVTLK Unmodified 1363.7096 0.70957864 79 CON__P35908v2;P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.92 2.71 8 1 57 2 4 3 5 4 4 4 5 4 5 5 5 6 6 4 47.524 47.262 2;3 6.3169E-23 53833 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 149.23 88.795 + 34615000000 229920000 432470000 617690000 4755600000 1901400000 3394700000 1906800000 2312400000 1986600000 3779500000 2974500000 2680500000 3908200000 1949700000 1785400000 44768 79 40118 375065;375066;375067;375068;375069;375070;375071;375072;375073;375074;375075;375076;375077;375078;375079;375080;375081;375082;375083;375084;375085;375086;375087;375088;375089;375090;375091;375092;375093;375094;375095;375096;375097;375098;375099;375100;375101;375102;375103;375104;375105;375106;375107;375108;375109;375110;375111;375112;375113;375114;375115;375116;375117;375118;375119;375120;375121;375122;375123;375124;375125;375126;375127;375128;375129;375130 295842;295843;295844;295845;295846;295847;295848;295849;295850;295851;295852;295853;295854;295855;295856;295857;295858;295859;295860;295861;295862;295863;295864;295865;295866;295867;295868;295869;295870;295871;295872;295873;295874;295875;295876;295877;295878;295879;295880;295881;295882;295883;295884;295885;295886;295887;295888;295889;295890;295891;295892;295893;295894;295895;295896;295897;295898;295899;295900;295901;295902;295903;295904;295905 295899 51 RTAAENDFVTLKK Unmodified 1491.8045 0.80454166 79 CON__P35908v2;P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 23 2 2 2 2 2 2 2 2 2 2 2 1 36.448 36.605 2;3 3.3912E-07 40450 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 105.03 94.907 + 6791200000 0 0 0 1299600000 219030000 192160000 248530000 891280000 313850000 452210000 416160000 1498800000 750560000 339180000 169820000 44769 79 40119 375131;375132;375133;375134;375135;375136;375137;375138;375139;375140;375141;375142;375143;375144;375145;375146;375147;375148;375149;375150;375151;375152;375153 295906;295907;295908;295909;295910;295911;295912;295913;295914;295915;295916;295917;295918;295919;295920;295921 295906 10 RTAAENDFVVLK Unmodified 1361.7303 0.73031409 77 CON__P19013;P19013 KRT4 Keratin, type II cytoskeletal 4 no no 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 52.838 53.099 3 7.6563E-09 61057 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 113.24 101.71 + 336770000 0 0 0 0 0 0 24201000 183030000 0 3907200 0 45184000 67889000 12561000 0 44770 77 40120 375154;375155;375156;375157;375158;375159;375160 295922;295923;295924;295925;295926;295927;295928 295925 7 RTAAENDFVVLKK Unmodified 1489.8253 0.8252771 77 CON__P19013;P19013 KRT4 Keratin, type II cytoskeletal 4 no no 0 0 2 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 42.464 42.642 3 6.5828E-06 47489 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 75.589 71.601 + 153170000 0 0 0 0 0 0 66230000 66477000 1246900 0 0 0 19211000 0 0 44771 77 40121 375161;375162;375163;375164 295929;295930;295931 295930 3 RTAAENEFVALK Unmodified 1347.7147 0.71466402 53 CON__O95678;O95678 KRT75 Keratin, type II cytoskeletal 75 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 46.536 46.686 3 0.028961 53605 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 41.218 25.328 + 76297000 0 0 0 5544200 3284600 7069100 5232600 6981800 5445600 7828200 10002000 13478000 0 4992400 6438200 44772 53 40122 375165;375166;375167;375168;375169;375170;375171;375172;375173;375174;375175 295932;295933;295934 295934 0 RTAAENEFVLLK Unmodified 1389.7616 0.76161421 107;91;109 CON__Q9R0H5;CON__Q3SY84;Q3SY84;CON__Q9DCV7 KRT71 Keratin, type II cytoskeletal 71 no no 0 0 1 By MS/MS 10 0 1 1 64.43 64.611 3 0.025273 73937 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 21.351 13.567 + 3650500 0 0 0 0 0 0 0 3650500 0 0 0 0 0 0 0 44773 109;91;107 40123 375176 295935 295935 1 RTAAENEFVTLK Unmodified 1377.7252 0.72522871 66;58;779;80;960 P04259;CON__P50446;P12035;CON__P12035;CON__P02538;P02538;CON__P04259 KRT6B;KRT3;KRT6A Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 3;Keratin, type II cytoskeletal 6A no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 4 24 2 1 1 2 2 2 2 2 2 2 2 2 2 2 2 49.031 48.237 2;3 1.1705E-25 54876 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 168.3 103 + 5159900000 125330000 68429000 9891500 1286400000 134530000 207030000 166820000 412930000 185330000 515120000 260570000 311340000 1164700000 179840000 131710000 44774 779;80;960;58;66 40124 375177;375178;375179;375180;375181;375182;375183;375184;375185;375186;375187;375188;375189;375190;375191;375192;375193;375194;375195;375196;375197;375198;375199;375200;375201;375202;375203;375204 295936;295937;295938;295939;295940;295941;295942;295943;295944;295945;295946;295947;295948;295949;295950;295951;295952;295953;295954;295955;295956;295957;295958;295959 295957 14 RTAAENEFVTLKK Unmodified 1505.8202 0.82019173 66;58;779;80;960 P04259;CON__P50446;P12035;CON__P12035;CON__P02538;P02538;CON__P04259 KRT6B;KRT3;KRT6A Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 3;Keratin, type II cytoskeletal 6A no no 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 37.667 37.808 3 2.2023E-06 41836 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 77.192 56.988 + 920960000 0 0 0 168920000 13963000 0 85594000 82828000 15929000 34958000 30299000 74897000 380100000 33473000 0 44775 779;80;960;58;66 40125 375205;375206;375207;375208;375209;375210;375211;375212;375213;375214 295960;295961;295962;295963;295964;295965;295966;295967;295968;295969;295970 295964 8 RTAATLATHELR Unmodified 1338.7368 0.73679645 3314 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 26.404 26.608 3 0.0014612 28653 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 44.436 39.297 129670000 0 0 0 10397000 0 22422000 11574000 0 9186300 17227000 0 26593000 0 0 32266000 44776 3314 40126 375215;375216;375217;375218;375219;375220;375221 295971;295972;295973;295974;295975 295971 3 RTAEHEAAQQDLQSK Unmodified 1710.8285 0.82852458 3151 Q86UP2 KTN1 Kinectin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9.4953 9.1623 3 1.2502E-56 14241 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 155.57 122.3 83312000 32703000 0 13679000 2925400 2434100 1198700 2629500 1293900 623670 1310500 11764000 4271100 2085500 1289400 5104600 44777 3151 40127 375222;375223;375224;375225;375226;375227;375228;375229;375230;375231;375232;375233;375234;375235 295976;295977;295978;295979;295980;295981;295982;295983;295984;295985;295986;295987;295988 295979 13 RTAEVPVSEASGQAPPAK Unmodified 1793.9272 0.92717599 1536 P48382 RFX5 DNA-binding protein RFX5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 34.136 34.318 2;3 2.267E-30 37796 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 95.145 88.847 608140000 0 0 0 38042000 40889000 37461000 43134000 45899000 41326000 44718000 65972000 106480000 43991000 42536000 57699000 44778 1536 40128 375236;375237;375238;375239;375240;375241;375242;375243;375244;375245;375246;375247;375248;375249;375250;375251;375252;375253;375254;375255;375256;375257;375258;375259 295989;295990;295991;295992;295993;295994;295995;295996;295997;295998;295999;296000;296001;296002;296003;296004;296005;296006 296005 17 RTAHNDTEPIEEEQEAFFEPPPGQGEDVLK Unmodified 3408.5746 0.57460789 1698 P52747 ZNF143 Zinc finger protein 143 yes yes 0 0 1 By MS/MS 2 0 1 1 83.96 75.83 4 0.0013489 99289 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 30.206 28.175 9678700 9678700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44779 1698 40129 375260 296007 296007 0 RTAIEAFNETIK Unmodified 1391.7409 0.74087877 157 O00459;P27986 PIK3R2;PIK3R1 Phosphatidylinositol 3-kinase regulatory subunit beta;Phosphatidylinositol 3-kinase regulatory subunit alpha no no 0 0 1 By MS/MS 2 0 2 2 69.356 61.067 2;3 4.6757E-09 81614 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 133.05 72.613 66701000 66701000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44780 157 40130 375261;375262 296008;296009;296010 296009 2 RTALVANTSNMPVAAR Oxidation (M) 1686.8835 0.88353704 1398 P38606 ATP6V1A V-type proton ATPase catalytic subunit A yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 33.087 33.183 3 0.00017048 36929 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 59.502 42.424 125400000 0 0 0 15485000 9160800 24870000 0 0 0 22415000 0 0 18676000 11564000 23228000 44781 1398 40131 375263;375264;375265;375266;375267;375268;375269 296011;296012 296012 2165 2 RTALVANTSNMPVAAR Unmodified 1670.8886 0.88862242 1398 P38606 ATP6V1A V-type proton ATPase catalytic subunit A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 48.236 48.558 3 6.1683E-19 53834 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.508 81.842 218180000 0 0 0 0 0 69420000 0 0 0 66502000 0 82262000 0 0 0 44782 1398 40131 375270;375271;375272;375273;375274;375275 296013;296014;296015;296016 296014 4 RTAPEDFLGK Unmodified 1132.5877 0.58767259 3839 Q96FV9 THOC1 THO complex subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43.872 43.172 2 0.0032568 61086 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 99.815 58.367 432130000 124820000 0 22245000 14973000 13234000 22316000 16226000 20007000 17942000 20904000 25200000 41944000 32113000 20264000 39948000 44783 3839 40132 375276;375277;375278;375279;375280;375281;375282;375283;375284;375285;375286;375287;375288;375289 296017;296018;296019;296020;296021;296022;296023;296024;296025;296026 296021 9 RTAQEVETYR Unmodified 1251.6208 0.62076364 1062 P17844 DDX5 Probable ATP-dependent RNA helicase DDX5 yes yes 0 0 1 By matching By matching By matching By matching By MS/MS By matching By matching 10 0 7 1 1 1 1 1 1 1 16.302 16.516 3 0.013686 15765 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 39.266 29.521 15617000 0 0 0 0 0 1994800 0 1841200 1068500 2334900 2759600 0 2718100 2899500 0 44784 1062 40133 375290;375291;375292;375293;375294;375295;375296 296027 296027 1 RTAQEVETYRR Unmodified 1407.7219 0.72187466 1062 P17844 DDX5 Probable ATP-dependent RNA helicase DDX5 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.136 13.291 3 0.00022488 12540 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 104.24 72.236 611310000 0 0 0 25310000 30088000 34665000 42163000 34867000 24044000 88576000 59892000 80632000 60945000 47575000 82550000 44785 1062 40134 375297;375298;375299;375300;375301;375302;375303;375304;375305;375306;375307;375308 296028;296029;296030;296031;296032;296033;296034;296035;296036;296037;296038;296039;296040 296029 8 RTASAPNLAETEK Unmodified 1386.7103 0.71030693 3180 Q86W92 PPFIBP1 Liprin-beta-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24.165 23.721 3 7.192E-05 24795 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 83.087 63.428 275530000 51055000 0 9081700 14016000 14656000 12712000 15613000 16397000 11855000 24142000 19270000 22346000 24994000 16450000 22940000 44786 3180 40135 375309;375310;375311;375312;375313;375314;375315;375316;375317;375318;375319;375320;375321;375322 296041;296042;296043;296044;296045;296046;296047;296048;296049;296050;296051;296052;296053;296054;296055 296049 12 RTCWPTDLEEAK Unmodified 1504.698 0.69802768 4491 Q9HAV4 XPO5 Exportin-5 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 60.788 54.741 3 0.0048583 67853 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 43.798 33.653 35348000 27016000 0 8332100 0 0 0 0 0 0 0 0 0 0 0 0 44787 4491 40136 375323;375324 296056;296057 296057 2 RTDALTSSPGR Unmodified 1159.5945 0.59454889 1590 P49736 MCM2 DNA replication licensing factor MCM2 yes yes 0 0 1 By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 13.381 13.536 2 0.039943 12120 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.398 16.59 42990000 0 0 0 2079400 1582000 3121000 2350200 1759800 1786200 0 5975100 6235300 3653800 4534700 9912100 44788 1590 40137 375325;375326;375327;375328;375329;375330;375331;375332;375333;375334;375335 296058 296058 1 RTDDIPVWDQEFLK Unmodified 1760.8733 0.87334951 1946 P63208 SKP1 S-phase kinase-associated protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.46 3.84 4 2 7 2 2 2 1 1 1 1 1 1 1 84.309 82.498 2;3 8.1608E-06 94964 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.283 58.087 764280000 210900000 362050000 44528000 0 0 0 0 4311800 4669800 9180400 8633500 9480400 0 13456000 97082000 44789 1946 40138 375336;375337;375338;375339;375340;375341;375342;375343;375344;375345;375346;375347;375348 296059;296060;296061;296062;296063;296064;296065;296066;296067;296068;296069;296070;296071;296072 296062 13 RTDEAAFQK Unmodified 1064.5251 0.52507234 1206 P26447 S100A4 Protein S100-A4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.45 3.9 1 6 3 12 2 5 3 1 1 1 1 1 1 1 1 1 1 1 1 17.125 16.289 1;2 7.8709E-115 10823 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 220.71 161.93 20001000000 642240000 7903900000 6227700000 291760000 329330000 305710000 402930000 335730000 300090000 479970000 587310000 414480000 500860000 669110000 610230000 44790 1206 40139 375349;375350;375351;375352;375353;375354;375355;375356;375357;375358;375359;375360;375361;375362;375363;375364;375365;375366;375367;375368;375369;375370 296073;296074;296075;296076;296077;296078;296079;296080;296081;296082;296083;296084;296085;296086;296087;296088;296089;296090;296091;296092;296093;296094;296095;296096;296097 296076 17 RTDIFGVEETAIGK Unmodified 1534.7991 0.79912193 2539 Q15459 SF3A1 Splicing factor 3A subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.41 2.1 2 25 1 1 2 2 2 2 3 2 2 2 2 2 2 2 71.566 71.232 2;3 0.00026018 88036 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 60.55 40.872 538230000 4341400 0 5207100 18021000 16651000 55324000 21926000 39255000 34364000 38387000 38524000 73514000 36303000 43802000 112610000 44791 2539 40140 375371;375372;375373;375374;375375;375376;375377;375378;375379;375380;375381;375382;375383;375384;375385;375386;375387;375388;375389;375390;375391;375392;375393;375394;375395;375396;375397 296098;296099;296100;296101;296102;296103;296104;296105;296106;296107;296108;296109;296110;296111;296112;296113;296114;296115;296116;296117;296118;296119 296112 19 RTDLCDHALHISHDEL Unmodified 1930.8956 0.89555829 5095 Q9Y2B0 CNPY2 Protein canopy homolog 2 yes yes 0 0 1 By MS/MS 2 0 1 1 66.812 58.517 4 0.00040668 78447 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.14 67.741 22378000 22378000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44792 5095 40141 375398 296120 296120 1 RTDLSSEHFSHSSK Unmodified 1616.7543 0.75429701 3964 Q96R06 SPAG5 Sperm-associated antigen 5 yes yes 0 0 1 By matching By matching By matching By matching By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 14.451 14.712 3 0.00040971 13328 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.212 52.927 31432000 0 0 0 2023000 0 0 0 0 2986200 4702300 4111300 4847200 0 4370500 8391500 44793 3964 40142 375399;375400;375401;375402;375403;375404;375405 296121;296122 296121 2 RTDLTQDDFHLK Unmodified 1487.7369 0.73685603 3820 Q96ER3 SAAL1 Protein SAAL1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 52.16 48.376 3 0.0021093 61217 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 56.205 40.66 25381000 9800100 0 5036900 0 0 0 0 0 0 0 0 10544000 0 0 0 44794 3820 40143 375406;375407;375408 296123;296124;296125 296124 3 RTDVNPFLAPR Unmodified 1284.6939 0.693869 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 13 1 1 1 1 2 1 1 1 1 1 1 1 53.575 53.718 3 0.0024959 60435 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 53.237 30.596 295800000 0 0 0 13111000 11373000 21897000 25374000 24614000 14245000 23178000 23224000 49122000 25904000 16020000 47736000 44795 2556 40144 375409;375410;375411;375412;375413;375414;375415;375416;375417;375418;375419;375420;375421 296126;296127;296128;296129;296130;296131;296132;296133;296134;296135;296136;296137;296138;296139 296134 14 RTDYTPFSCLK Unmodified 1386.6602 0.66018561 1583 P49643 PRIM2 DNA primase large subunit yes yes 0 0 1 By MS/MS 2 0 1 1 68.615 60.321 2 0.0016129 80557 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 105.98 75.411 8914100 8914100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44796 1583 40145 375422 296140 296140 1 RTEALEQGGLPK Unmodified 1297.699 0.69901396 1633 P50613 CDK7 Cyclin-dependent kinase 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 34.01 32.844 3 0.0010978 41755 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 65.179 54.991 106110000 6335900 20398000 22204000 3118900 4649300 5282900 4257700 4323000 0 7086800 6771700 7112400 4889900 4398400 5281200 44797 1633 40146 375423;375424;375425;375426;375427;375428;375429;375430;375431;375432;375433;375434;375435;375436;375437 296141;296142;296143;296144;296145;296146;296147;296148;296149;296150 296149 10 RTEEEEEDLPDAQTAAK Unmodified 1930.8756 0.87559393 351 O43665 RGS10 Regulator of G-protein signaling 10 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 34.248 33.323 3 0.00032432 36572 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 51.798 45.217 149330000 16146000 41069000 0 5466600 5399400 4883200 5732900 4709900 4510900 9168600 15021000 8262500 9617500 4278000 15061000 44798 351 40147 375438;375439;375440;375441;375442;375443;375444;375445;375446;375447;375448;375449;375450;375451;375452 296151;296152;296153;296154;296155;296156;296157;296158;296159;296160;296161;296162;296163;296164;296165;296166;296167 296160 17 RTEEGPTLSYGR Unmodified 1364.6684 0.66844211 1473 P43243 MATR3 Matrin-3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 31.721 31.908 2;3 1.3549E-08 34030 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 97.957 75.237 736050000 0 0 0 34461000 47259000 46061000 49098000 51479000 41132000 79217000 72472000 110420000 61520000 47980000 94953000 44799 1473 40148 375453;375454;375455;375456;375457;375458;375459;375460;375461;375462;375463;375464;375465;375466;375467;375468;375469;375470;375471;375472;375473;375474;375475;375476 296168;296169;296170;296171;296172;296173;296174;296175;296176;296177;296178;296179;296180;296181;296182;296183 296181 16 RTEEGPTLSYGRDGR Unmodified 1692.818 0.81795989 1473 P43243 MATR3 Matrin-3 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 27.622 27.859 3 0.011198 30099 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 53.946 41.923 130890000 0 0 0 0 6316700 8739000 9388600 10929000 9015100 11554000 12024000 19573000 14279000 12927000 16150000 44800 1473 40149 375477;375478;375479;375480;375481;375482;375483;375484;375485;375486;375487 296184;296185 296185 1 RTEEPDRDER Unmodified 1301.596 0.59600545 630 O95232 LUC7L3 Luc7-like protein 3 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 2 1 1 1 1 1 1 1 1 5.5814 5.6594 3 0.0076824 3546 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 106.62 75.125 169380000 0 0 0 13679000 16621000 20900000 20255000 0 19801000 14530000 0 16566000 15803000 12398000 18830000 44801 630 40150 375488;375489;375490;375491;375492;375493;375494;375495;375496;375497;375498 296186;296187;296188;296189;296190;296191 296189 4 RTEGVGPGVPGEVEMVK Unmodified 1739.8876 0.88761936 1215 P27361 MAPK3 Mitogen-activated protein kinase 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.984 59.095 3 0.0015399 67338 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 41.323 27.31 119840000 0 0 0 4601300 3556200 17018000 6191900 7473900 4709200 11051000 12416000 9545100 8586000 9610000 25085000 44802 1215 40151 375499;375500;375501;375502;375503;375504;375505;375506;375507;375508;375509;375510 296192;296193;296194;296195;296196;296197;296198;296199;296200;296201;296202;296203 296192 12 RTEMENEFVLIK Oxidation (M) 1523.7654 0.76537896 67 CON__P05787;P05787;CON__H-INV:HIT000016045 KRT8 Keratin, type II cytoskeletal 8 yes no 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.69 2.88 3 2 24 2 1 2 2 2 2 2 2 3 2 2 2 2 2 1 61.918 61.111 2;3 7.3663E-09 69501 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 131.13 118.97 + 3075200000 19700000 17114000 144500000 126100000 130090000 308670000 238030000 236950000 228740000 309360000 248580000 457410000 306700000 199650000 103640000 44803 67 40152 375511;375512;375513;375514;375515;375516;375517;375518;375519;375520;375521;375522;375523;375524;375525;375526;375527;375528;375529;375530;375531;375532;375533;375534;375535;375536;375537;375538;375539 296204;296205;296206;296207;296208;296209;296210;296211;296212;296213;296214;296215;296216;296217;296218;296219;296220;296221;296222;296223;296224;296225;296226;296227;296228;296229;296230;296231;296232 296204 79 21 RTEMENEFVLIK Unmodified 1507.7705 0.77046434 67 CON__P05787;P05787;CON__H-INV:HIT000016045 KRT8 Keratin, type II cytoskeletal 8 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.69 2.88 3 2 24 2 2 1 2 2 2 2 2 2 2 2 2 2 2 2 72.803 72.073 2;3 0.00022075 93259 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.073 64.096 + 1400900000 75838000 28511000 34815000 29751000 28612000 121480000 44084000 93736000 85837000 102010000 101300000 162990000 88363000 102620000 300970000 44804 67 40152 375540;375541;375542;375543;375544;375545;375546;375547;375548;375549;375550;375551;375552;375553;375554;375555;375556;375557;375558;375559;375560;375561;375562;375563;375564;375565;375566;375567;375568 296233;296234;296235;296236;296237;296238;296239;296240;296241;296242;296243;296244;296245;296246;296247;296248;296249;296250;296251;296252;296253;296254;296255;296256;296257;296258;296259;296260;296261;296262;296263;296264;296265;296266 296240 25 RTEMENEFVLIKK Oxidation (M) 1651.8603 0.86034198 67 CON__P05787;P05787;CON__H-INV:HIT000016045 KRT8 Keratin, type II cytoskeletal 8 yes no 0 1 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 46.972 47.321 3 6.7083E-07 52333 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 96.734 85.628 + 299650000 0 0 0 0 0 8826500 25758000 0 0 22026000 0 157470000 29711000 0 55859000 44805 67 40153 375569;375570;375571;375572;375573;375574 296267;296268;296269;296270;296271;296272 296272 79 6 RTEMENEFVLIKK Unmodified 1635.8654 0.86542736 67 CON__P05787;P05787;CON__H-INV:HIT000016045 KRT8 Keratin, type II cytoskeletal 8 yes no 0 0 2 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 59.183 59.496 3 0.047504 66875 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.532 35.611 + 37194000 0 0 0 0 0 0 5577200 3282600 1973300 0 0 10614000 0 0 15746000 44806 67 40153 375575;375576;375577;375578;375579 296273 296273 1 RTEQEEDEELLTESSK Unmodified 1921.8753 0.87525958 389 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 42.349 42.5 3 0.00012006 47643 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 52.731 49.669 35611000 0 0 0 3548400 2229100 4669200 2734200 2110800 2456500 3564400 0 3682100 2960100 3296900 4359500 44807 389 40154 375580;375581;375582;375583;375584;375585;375586;375587;375588;375589;375590 296274;296275;296276;296277;296278;296279;296280 296274 6 RTESAYDWTSLSSSSIK Unmodified 1916.9116 0.91158551 3025 Q70E73 RAPH1 Ras-associated and pleckstrin homology domains-containing protein 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.44 3.98 4 5 1 1 2 1 1 1 1 1 71.116 69.377 3 3.2587E-05 90669 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.551 78.386 54214000 27784000 169910 9124800 0 0 3793000 3449300 0 3630900 6262700 0 0 0 0 0 44808 3025 40155 375591;375592;375593;375594;375595;375596;375597;375598;375599 296281;296282;296283;296284;296285;296286;296287 296284 7 RTFDQNEELGLNDMK Unmodified 1808.8363 0.83631208 477 O75312 ZPR1 Zinc finger protein ZPR1 yes yes 0 0 1 By MS/MS By MS/MS 6 4 1 1 1 1 57.736 58.337 3 0.0073397 65679 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 31.7 26.488 4212200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4212200 44809 477 40156 375600;375601 296288;296289 296288 2 RTFDQNEELGLNDMK Oxidation (M) 1824.8312 0.8312267 477 O75312 ZPR1 Zinc finger protein ZPR1 yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 51.399 45.409 3 0.0001041 57487 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 90.754 84.85 22832000 7716200 0 15116000 0 0 0 0 0 0 0 0 0 0 0 0 44810 477 40156 375602;375603 296290;296291 296291 603 2 RTFGMAEEYHR Unmodified 1395.6354 0.63536784 3311 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 2 1 31.37 31.643 3 0.00080903 33491 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 80.69 65.488 53853000 0 0 0 0 0 7445200 4718700 4663300 0 4469900 3598400 0 9017300 6471700 13469000 44811 3311 40157 375604;375605;375606;375607;375608;375609;375610;375611;375612;375613 296292;296293;296294;296295;296296;296297;296298;296299 296299 7 RTFGMAEEYHR Oxidation (M) 1411.6303 0.63028247 3311 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 yes yes 0 1 1 By MS/MS 10 0 1 1 19.175 19.797 3 0.038976 19906 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 42.425 34.7 7045600 0 0 0 0 0 0 0 0 0 0 0 7045600 0 0 0 44812 3311 40157 375614 296300 296300 0 RTFGSTSQSSSFSK Unmodified 1505.711 0.71103521 4407 Q9H582 ZNF644 Zinc finger protein 644 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 22.875 23.104 3 0.0055061 24863 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 25.024 20.394 43966000 0 0 0 0 2636300 4129300 3255500 2861700 2975400 5474500 4755900 7998500 0 4919800 4959000 44813 4407 40158 375615;375616;375617;375618;375619;375620;375621;375622;375623;375624 296301 296301 1 RTFSEPGDHPGMLTSGK Oxidation (M) 1831.8523 0.85229649 4480 Q9HA47 UCK1 Uridine-cytidine kinase 1 yes yes 0 1 1 By MS/MS 2 0 1 1 38.636 32.075 3 0.0013309 44591 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.343 32.091 13511000 13511000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44814 4480 40159 375625 296302 296302 5913 1 RTFSEPGDHPGMLTSGK Unmodified 1815.8574 0.85738187 4480 Q9HA47 UCK1 Uridine-cytidine kinase 1 yes yes 0 0 1 By MS/MS 2 0 1 1 48.795 40.969 3 0.014445 56901 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 34.649 22.448 7531100 7531100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44815 4480 40159 375626 296303 296303 0 RTGETGIEETILEGHLGVTK Unmodified 2139.1172 0.11716161 3701 Q93008 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 0 0 1 By MS/MS 2 0 1 1 83.424 75.294 3 2.4574E-07 98358 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.145 68.597 46915000 46915000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44816 3701 40160 375627 296304 296304 1 RTGFSTSPESPYTHWK Unmodified 1879.8853 0.88531118 4069 Q99873 PRMT1 Protein arginine N-methyltransferase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 2 52.459 50.813 3;4 1.8375E-36 55244 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 121.32 119.18 104800000 11610000 0 0 0 0 0 0 0 0 0 0 0 0 8699600 84493000 44817 4069 40161 375628;375629;375630;375631 296305;296306;296307;296308 296305 4 RTGIQEMR Unmodified 989.50765 0.50764813 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.96 14.122 2 0.017395 13407 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 113.26 38.841 676270000 0 0 0 23733000 34980000 30844000 39832000 41457000 29607000 62306000 101560000 80624000 76168000 67247000 87905000 44818 2290 40162 375632;375633;375634;375635;375636;375637;375638;375639;375640;375641;375642;375643 296309;296310;296311;296312;296313;296314;296315 296315 0 RTGIQEMREALQEK Oxidation (M) 1703.8625 0.86246725 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 1 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 21.809 22.068 3 0.001127 22198 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 66.285 36.304 107540000 0 0 0 0 0 8987200 16466000 7473900 16490000 10466000 0 27507000 11735000 0 8412000 44819 2290 40163 375644;375645;375646;375647;375648;375649;375650;375651 296316;296317;296318;296319;296320 296320 3744 5 RTGLGLASLPGPVK Unmodified 1364.814 0.81398414 3251 Q8IWZ8 SUGP1 SURP and G-patch domain-containing protein 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By matching 10 0 8 1 1 1 1 1 1 1 1 69.105 69.325 3 0.00071906 79438 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 38.995 35.133 24748000 0 0 0 0 0 3365500 1200300 0 1807900 0 2669800 4598800 2079500 2953300 6073300 44820 3251 40164 375652;375653;375654;375655;375656;375657;375658;375659 296321;296322 296322 2 RTGPAATTLPDGAAAESLVESSEVAVIGFFK Unmodified 3090.5873 0.58734483 838 P07237 P4HB Protein disulfide-isomerase yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 2 2 2 2 100.85 95.903 3 3.1721E-67 120023 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 116.52 111.14 48957000 38249000 10708000 0 0 0 0 0 0 0 0 0 0 0 0 0 44821 838 40165 375660;375661;375662;375663 296323;296324;296325;296326 296326 4 RTGPTQQQVEGR Unmodified 1355.6906 0.69057454 4171 Q9BUT9 FAM195A Protein FAM195A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 9.9518 10.062 3 0.0004233 8821 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 56.951 43.551 35201000 0 0 0 3080500 1849300 2790800 2778000 3057700 1983900 3454700 0 5181500 2848300 3077200 5099500 44822 4171 40166 375664;375665;375666;375667;375668;375669;375670;375671;375672;375673;375674;375675 296327;296328;296329;296330;296331;296332;296333;296334;296335;296336;296337 296329 11 RTGQPMIHIYLDK Oxidation (M) 1586.8239 0.8238969 2065 Q01844 EWSR1 RNA-binding protein EWS yes yes 0 1 1 By MS/MS 10 0 1 1 53.343 53.507 3 0.034686 60358 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 41.838 32.836 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44823 2065 40167 375676 296338 296338 1 RTGSDHTNPTSPLLVK Unmodified 1721.906 0.90604662 3791 Q96D71 REPS1 RalBP1-associated Eps domain-containing protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 45.665 38.673 3 0.00041997 53135 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.537 37.252 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44824 3791 40168 375677 296339 296339 1 RTGSENDFVVLK Unmodified 1363.7096 0.70957864 103 CON__Q7Z794;Q7Z794 KRT77 Keratin, type II cytoskeletal 1b yes no 0 0 1 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 2 1 2 1 1 1 1 1 1 1 1 49.466 49.567 3 8.7868E-09 57003 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 132.47 109.1 + 443980000 0 0 0 95801000 27293000 24869000 41951000 27819000 17217000 43598000 17506000 74163000 26998000 21347000 25415000 44825 103 40169 375678;375679;375680;375681;375682;375683;375684;375685;375686;375687;375688;375689;375690;375691 296340;296341;296342;296343;296344;296345;296346;296347;296348;296349;296350;296351;296352;296353;296354 296351 15 RTGSENDFVVLKK Unmodified 1491.8045 0.80454166 103 CON__Q7Z794;Q7Z794 KRT77 Keratin, type II cytoskeletal 1b yes no 0 0 2 By MS/MS By MS/MS By matching 10 0 3 1 1 1 38.668 38.394 3 0.016207 43071 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 57.106 51.604 + 48908000 0 0 0 35162000 3073900 0 0 0 10673000 0 0 0 0 0 0 44826 103 40170 375692;375693;375694 296355 296355 0 RTGSNAAQYK Unmodified 1094.5469 0.54687041 3339 Q8N556 AFAP1 Actin filament-associated protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 6.5774 3.1452 2 0.04135 6164 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.76 64.33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44827 3339 40171 375695 296356 296356 1 RTGSNISGASSDISLDEQYK Unmodified 2127.008 0.008005089 1132 P22059 OSBP Oxysterol-binding protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 55.555 51.679 3 0.00086488 64433 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 44.054 34.266 23423000 0 0 23423000 0 0 0 0 0 0 0 0 0 0 0 0 44828 1132 40172 375696 296357 296357 1 RTGYESGEYEMLGEGLGVK Unmodified 2073.9677 0.96772018 2317 Q13561 DCTN2 Dynactin subunit 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 79.029 74.291 3 5.283E-11 90994 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 81.003 81.003 144990000 22825000 95100000 27070000 0 0 0 0 0 0 0 0 0 0 0 0 44829 2317 40173 375697;375698;375699;375700 296358;296359;296360;296361 296361 4 RTGYESGEYEMLGEGLGVK Oxidation (M) 2089.9626 0.9626348 2317 Q13561 DCTN2 Dynactin subunit 2 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS 5.4 3.77 2 1 2 1 1 1 1 1 69.002 65.84 3 3.1007E-06 74961 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 66.874 62.768 53745000 14330000 4820900 23670000 0 0 0 0 3059400 0 0 0 7864000 0 0 0 44830 2317 40173 375701;375702;375703;375704;375705 296362;296363;296364;296365;296366 296366 3782 5 RTHNDIIHNENMR Unmodified 1648.7852 0.78521998 1017 P15311 EZR Ezrin yes yes 0 0 1 By MS/MS By MS/MS 10 0 3 1 2 18.75 19.352 3;4 0.0017098 18774 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.423 61.423 71009000 0 0 0 0 0 0 0 0 0 0 0 14977000 0 0 56032000 44831 1017 40174 375706;375707;375708 296367;296368 296368 1 RTHPTVPGIPGGTR Unmodified 1444.7899 0.78989465 143 O00327 ARNTL Aryl hydrocarbon receptor nuclear translocator-like protein 1 yes yes 0 0 1 By matching By MS/MS By MS/MS 10 0 3 1 1 1 37.691 37.912 3 0.0082671 41875 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 31.776 25.299 8200900 0 0 0 0 0 2741400 0 0 0 0 0 0 2917100 2542400 0 44832 143 40175 375709;375710;375711 296369;296370 296370 2 RTHSQGGYGSQGYK Unmodified 1524.707 0.70695288 5090 Q9Y285 FARSA Phenylalanine--tRNA ligase alpha subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.62 1.7 1 20 1 1 2 2 2 2 2 2 2 2 2 1 6.947 6.9106 2;3;4 8.1683E-09 4295 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.191 73.074 179110000 5202600 0 0 3796500 0 9353400 7342000 10873000 10683000 5548200 33853000 20320000 15822000 24159000 32161000 44833 5090 40176 375712;375713;375714;375715;375716;375717;375718;375719;375720;375721;375722;375723;375724;375725;375726;375727;375728;375729;375730;375731;375732 296371;296372;296373;296374;296375;296376;296377;296378 296371 6 RTIAQDYGVLK Unmodified 1262.6983 0.69828568 2131 Q06830 PRDX1 Peroxiredoxin-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.22 3.71 9 4 23 6 4 3 1 2 2 2 2 2 2 2 2 2 2 2 50.784 48.777 2;3 1.1819E-19 52617 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 181.53 120.7 15060000000 5494400000 1910400000 300320000 149180000 172230000 317410000 279790000 189650000 236400000 531740000 1170300000 1062000000 274700000 765240000 2206100000 44834 2131 40177 375733;375734;375735;375736;375737;375738;375739;375740;375741;375742;375743;375744;375745;375746;375747;375748;375749;375750;375751;375752;375753;375754;375755;375756;375757;375758;375759;375760;375761;375762;375763;375764;375765;375766;375767;375768 296379;296380;296381;296382;296383;296384;296385;296386;296387;296388;296389;296390;296391;296392;296393;296394;296395;296396;296397;296398;296399;296400;296401;296402;296403;296404;296405;296406;296407;296408;296409;296410;296411;296412;296413;296414;296415;296416 296390 24 RTIGSGEPGVPTK Unmodified 1297.699 0.69901396 2786 Q5T8P6 RBM26 RNA-binding protein 26 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 27.516 26.938 3 2.4689E-07 28769 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 76.759 45.87 779510000 205190000 0 15198000 25639000 39050000 59417000 48323000 48501000 45761000 61157000 65888000 0 59205000 49705000 56470000 44835 2786 40178 375769;375770;375771;375772;375773;375774;375775;375776;375777;375778;375779;375780;375781 296417;296418;296419;296420;296421;296422;296423;296424;296425;296426;296427;296428;296429;296430;296431 296423 13 RTIQEVLEEQSEDEDREAK Unmodified 2303.0877 0.087711973 1081 P18858 LIG1 DNA ligase 1 yes yes 0 0 2 By MS/MS By matching 2 0 3 2 1 65.874 59.09 3;4 1.3098E-95 79082 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 154.26 145.56 97882000 96180000 0 1702100 0 0 0 0 0 0 0 0 0 0 0 0 44836 1081 40179 375782;375783;375784 296432;296433;296434 296433 3 RTIQFVDWCPTGFK Unmodified 1753.861 0.86101068 3031;4093 Q71U36;P0DPH8;P0DPH7;Q6PEY2;Q9NY65;Q9BQE3 TUBA1A;TUBA3E;TUBA8;TUBA1C Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-8 chain;Tubulin alpha-1C chain no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 81.509 81.646 3 3.7097E-13 94119 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.541 87.84 108080000 0 0 0 0 0 10313000 0 6612500 5311000 3718900 3085200 5978800 2978000 5023600 65055000 44837 3031;4093 40180 375785;375786;375787;375788;375789;375790;375791;375792;375793 296435;296436;296437;296438;296439;296440;296441;296442 296437 7 RTIQTAESLGVPYEQWK Unmodified 2005.0269 0.026890038 433 O60825 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 2 1 1 1 1 1 1 1 1 74.243 72.752 2;3 5.0275E-05 84141 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 70.96 55.805 185560000 95644000 0 0 0 0 14260000 0 6884900 10484000 15073000 0 9788000 5279600 8706800 19439000 44838 433 40181 375794;375795;375796;375797;375798;375799;375800;375801;375802;375803 296443;296444;296445;296446;296447;296448;296449;296450;296451;296452;296453;296454 296444 12 RTLALQQQLQAVR Unmodified 1523.8896 0.8896087 4800 Q9P0W2 HMG20B SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 58.733 58.998 3 0.00069761 67621 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 46.069 42.086 38662000 0 0 0 0 0 3993100 1870900 3151900 0 3019200 4991500 5525800 3124800 3014800 9970100 44839 4800 40182 375804;375805;375806;375807;375808;375809;375810;375811;375812;375813 296455;296456;296457;296458;296459;296460;296461;296462 296461 8 RTLDFDPLLSPASPK Unmodified 1655.8883 0.88827129 2703 Q53H80 AKIRIN2 Akirin-2 yes yes 0 0 1 By MS/MS 2 0 1 1 86.133 78.002 3 0.0056573 101722 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 31.7 18.581 11780000 11780000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44840 2703 40183 375814 296463 296463 1 RTLDSMNSK Oxidation (M) 1066.5077 0.50770771 989 P13807 GYS1 Glycogen [starch] synthase, muscle yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 5.6833 2.3744 2 0.030035 5236 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.649 58.204 161370000 149190000 12182000 0 0 0 0 0 0 0 0 0 0 0 0 0 44841 989 40184 375815;375816 296464 296464 1 RTLEGELHDLR Unmodified 1337.7052 0.70516197 757 P02545 LMNA Prelamin-A/C;Lamin-A/C yes yes 0 0 1 By MS/MS 10 0 1 1 44.009 44.751 3 0.021441 49091 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.545 6.004 42219000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 42219000 44842 757 40185 375817 296465 296465 1 RTLLIDELNK Unmodified 1213.703 0.7030367 4577 Q9NQW6 ANLN Actin-binding protein anillin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 60.581 60.686 2;3 0.028492 68155 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.047 37.702 141420000 0 0 0 6893200 4394200 14703000 8360100 10364000 8948700 14009000 12595000 17000000 10759000 9488900 23907000 44843 4577 40186 375818;375819;375820;375821;375822;375823;375824;375825;375826;375827;375828;375829;375830;375831;375832;375833;375834;375835;375836;375837;375838;375839;375840;375841 296466;296467;296468 296467 3 RTLLVNCQNK Unmodified 1244.6659 0.66593969 3485 Q8TC07 TBC1D15 TBC1 domain family member 15 yes yes 0 0 1 By MS/MS 10 0 1 1 21.918 22.248 3 0.045891 22129 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 37.6 25.425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44844 3485 40187 375842 296469 296469 1 RTLPCQAYVNQGENLETDQWPQK Unmodified 2774.3082 0.30822663 3207 Q86YD1 PTOV1 Prostate tumor-overexpressed gene 1 protein yes yes 0 0 1 By MS/MS 2 0 1 1 75.661 67.53 3 4.0501E-25 89123 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 106.69 103.48 9993700 9993700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44845 3207 40188 375843 296470 296470 1 RTLPENLTLEDAK Unmodified 1498.7991 0.79912193 3668 Q92830 KAT2A Histone acetyltransferase KAT2A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.53 1.88 1 16 1 1 2 1 1 1 1 1 2 2 2 1 1 55.597 55.492 2;3 0.0010447 62625 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 45.864 29.465 123640000 0 0 4436200 5935400 10807000 10326000 6669400 6145300 8168400 10232000 18510000 23142000 10159000 0 9105100 44846 3668 40189 375844;375845;375846;375847;375848;375849;375850;375851;375852;375853;375854;375855;375856;375857;375858;375859;375860 296471;296472;296473;296474;296475;296476;296477;296478;296479;296480;296481;296482;296483;296484;296485;296486 296472 15 RTLPSTSSSGSK Unmodified 1206.6204 0.62042929 869 P08651 NFIC Nuclear factor 1 C-type yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 8.1182 8.3005 2 0.013082 5792 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.56 39.256 57086000 0 0 0 0 0 2948500 963010 3282500 4882100 6946800 24885000 1649600 0 827810 10701000 44847 869 40190 375861;375862;375863;375864;375865;375866;375867;375868;375869 296487;296488;296489 296488 2 RTLRDIETFYNTSIEEMPLNVADLI Unmodified 2952.4903 0.49027332 1816 P60842 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 0 0 2 By MS/MS 2 0 1 1 100.77 92.638 3 0.00020834 119351 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 59.814 54.213 16566000 16566000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44848 1816 40191 375870 296490 296490 1 RTLSDPPSPLPHGPPNK Unmodified 1808.9533 0.95333116 4994 Q9ULH1 ASAP1 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 54.448 46.34 3 0.0090287 63686 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 38.261 25.16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44849 4994 40192 375871 296491 296491 1 RTMIQSPSGVILQEAADVHAR Oxidation (M) 2294.1801 0.18011299 1029 P15924 DSP Desmoplakin yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 72.732 72.946 4 0.00015065 83459 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.737 30.968 24300000 0 0 0 0 0 0 0 0 4615300 5398900 0 0 0 0 14286000 44850 1029 40193 375872;375873;375874 296492 296492 1445 1 RTNAENEFVTIK Unmodified 1420.731 0.73104237 780 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.14 3.38 1 23 2 85 8 8 10 13 8 4 6 10 4 7 5 6 9 9 4 49.466 48.917 2;3 4.0246E-22 49126 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 141.13 128.33 + 98210000000 2832900000 571940000 1899900000 14693000000 5402500000 8563900000 5878800000 9335500000 5824200000 9987200000 7141000000 5894400000 10059000000 4341900000 5783800000 44851 780 40194 375875;375876;375877;375878;375879;375880;375881;375882;375883;375884;375885;375886;375887;375888;375889;375890;375891;375892;375893;375894;375895;375896;375897;375898;375899;375900;375901;375902;375903;375904;375905;375906;375907;375908;375909;375910;375911;375912;375913;375914;375915;375916;375917;375918;375919;375920;375921;375922;375923;375924;375925;375926;375927;375928;375929;375930;375931;375932;375933;375934;375935;375936;375937;375938;375939;375940;375941;375942;375943;375944;375945;375946;375947;375948;375949;375950;375951;375952;375953;375954;375955;375956;375957;375958;375959;375960;375961;375962;375963;375964;375965;375966;375967;375968;375969;375970;375971;375972;375973;375974;375975;375976;375977;375978;375979;375980;375981;375982;375983;375984;375985 296493;296494;296495;296496;296497;296498;296499;296500;296501;296502;296503;296504;296505;296506;296507;296508;296509;296510;296511;296512;296513;296514;296515;296516;296517;296518;296519;296520;296521;296522;296523;296524;296525;296526;296527;296528;296529;296530;296531;296532;296533;296534;296535;296536;296537;296538;296539;296540;296541;296542;296543;296544;296545;296546;296547;296548;296549;296550;296551;296552;296553;296554;296555;296556;296557;296558;296559;296560;296561;296562;296563;296564;296565;296566;296567;296568;296569;296570;296571;296572;296573;296574;296575;296576;296577;296578;296579;296580;296581;296582;296583;296584;296585;296586;296587;296588;296589;296590;296591;296592;296593;296594;296595;296596;296597;296598;296599;296600;296601;296602;296603;296604;296605;296606;296607;296608;296609;296610;296611;296612;296613;296614;296615;296616;296617;296618;296619;296620;296621;296622;296623;296624;296625;296626;296627;296628;296629;296630;296631;296632;296633;296634;296635;296636;296637;296638;296639;296640;296641;296642;296643;296644;296645;296646;296647;296648;296649;296650;296651;296652;296653;296654;296655;296656;296657;296658;296659;296660;296661;296662;296663;296664;296665;296666 296612 164 RTNAENEFVTIKK Unmodified 1548.826 0.82600539 780 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.79 2.84 7 1 44 5 3 4 5 4 3 5 4 3 4 5 2 2 3 35.772 35.407 3;4 5.9948E-12 35983 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 134.13 122.86 + 44390000000 763200000 0 6454600 6452300000 1627200000 1468300000 1689200000 12212000000 1937800000 3361500000 2081700000 6635200000 3740600000 1466500000 948390000 44852 780 40195 375986;375987;375988;375989;375990;375991;375992;375993;375994;375995;375996;375997;375998;375999;376000;376001;376002;376003;376004;376005;376006;376007;376008;376009;376010;376011;376012;376013;376014;376015;376016;376017;376018;376019;376020;376021;376022;376023;376024;376025;376026;376027;376028;376029;376030;376031;376032;376033;376034;376035;376036;376037 296667;296668;296669;296670;296671;296672;296673;296674;296675;296676;296677;296678;296679;296680;296681;296682;296683;296684;296685;296686;296687;296688;296689;296690;296691;296692;296693;296694;296695;296696;296697;296698;296699;296700;296701;296702;296703;296704;296705;296706;296707;296708;296709;296710;296711;296712;296713;296714;296715;296716;296717;296718;296719;296720 296680 43 RTPAPEPEPCEASELPAK Unmodified 1977.9466 0.94659081 5007 Q9ULV3 CIZ1 Cip1-interacting zinc finger protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 45.881 45.808 3 0.003046 51410 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 31.753 23.84 52968000 0 0 0 12413000 0 13313000 14837000 12406000 0 0 0 0 0 0 0 44853 5007 40196 376038;376039;376040;376041;376042 296721;296722;296723;296724 296721 4 RTPESTQIGQYGNGLK Unmodified 1747.8853 0.88531118 5299 Q9Y6X9 MORC2 MORC family CW-type zinc finger protein 2 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 42.173 42.278 3 0.011972 47499 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 29.077 19.006 30048000 0 0 0 0 3275300 5567100 6795400 0 0 5853900 0 8556000 0 0 0 44854 5299 40197 376043;376044;376045;376046;376047;376048 296725;296726;296727;296728 296725 4 RTPGRPTSSQSYEQNIK Unmodified 1947.9763 0.97625145 415 O60573 EIF4E2 Eukaryotic translation initiation factor 4E type 2 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 22.581 22.786 3;4 4.0678E-24 23203 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 108.34 63.736 509410000 0 0 0 19032000 15808000 20896000 27269000 40499000 23153000 50180000 72284000 89982000 55986000 48381000 45938000 44855 415 40198 376049;376050;376051;376052;376053;376054;376055;376056;376057;376058;376059;376060;376061;376062;376063;376064;376065;376066;376067;376068;376069;376070;376071;376072 296729;296730;296731;296732;296733;296734;296735;296736;296737;296738;296739;296740;296741;296742;296743;296744;296745 296742 8 RTPNETTSVLEPKK Unmodified 1598.8628 0.86278482 3523 Q8TF01 PNISR Arginine/serine-rich protein PNISR yes yes 0 0 2 By MS/MS 2 0 1 1 34.144 27.913 3 0.0026039 39329 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.885 49.085 11209000 11209000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44856 3523 40199 376073 296746 296746 1 RTPNGVVLAPVQLGK Unmodified 1547.9148 0.91476081 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 66.758 67.03 3 0.008769 76062 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 31.043 26.338 21099000 0 0 0 0 0 0 0 2549400 2490200 3070800 0 4420400 0 2199300 6368400 44857 2392 40200 376074;376075;376076;376077;376078;376079 296747;296748;296749 296749 3 RTPNNVVSTPAPSPDASQLASSLSSQK Unmodified 2738.3835 0.38350006 3573 Q8WWI1 LMO7 LIM domain only protein 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72.272 71.545 3 2.9248E-104 90740 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 143.89 132.9 691070000 68273000 0 5730900 26597000 44014000 49621000 38237000 40652000 35184000 71262000 58288000 68425000 49312000 54605000 80869000 44858 3573 40201 376080;376081;376082;376083;376084;376085;376086;376087;376088;376089;376090;376091;376092;376093 296750;296751;296752;296753;296754;296755;296756;296757;296758;296759;296760;296761;296762;296763 296755 14 RTPSSGMSSTMK Oxidation (M) 1284.5802 0.58022073 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 1 1 By MS/MS 2 0 1 1 8.3503 4.7117 3 0.0078059 8328 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.46 40.088 19412000 19412000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44859 2775 40202 376094 296764 296764 4414 0 RTPSTKPTVR Unmodified 1141.6568 0.65675521 3035 Q765P7 MTSS1L MTSS1-like protein yes yes 0 0 2 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 6.6178 6.7493 3 0.035868 4148 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.327 48.201 43427000 0 0 0 3376400 3031600 0 4018800 4754700 3117000 4478100 6905200 4159200 0 3346200 6239500 44860 3035 40203 376095;376096;376097;376098;376099;376100;376101;376102;376103;376104 296765 296765 1 RTPTAEERER Unmodified 1243.6269 0.62691165 4282 Q9C0B1 FTO Alpha-ketoglutarate-dependent dioxygenase FTO yes yes 0 0 2 By MS/MS 10 0 1 1 5.6026 5.9307 3 0.044679 2986 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.247 24.766 191430000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 191430000 44861 4282 40204 376105 296766 296766 0 RTPVIDADK Unmodified 1013.5506 0.55055881 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 19.307 18.602 2 0.020148 26789 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.95 56.892 161400000 72657000 8828700 22186000 0 0 10466000 2811700 2750000 4497700 5033000 4697000 6963500 6168000 5334400 9008300 44862 2392 40205 376106;376107;376108;376109;376110;376111;376112;376113;376114;376115;376116;376117;376118 296767;296768;296769 296769 1 RTPVIDADKPVSSQLR Unmodified 1780.9795 0.97954591 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 1 2 2 2 45.203 45.347 3;4 2.9463E-05 49466 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.658 56.648 401870000 0 0 0 21383000 21952000 41035000 33791000 35387000 20870000 40101000 40165000 12614000 33009000 34094000 67466000 44863 2392 40206 376119;376120;376121;376122;376123;376124;376125;376126;376127;376128;376129;376130;376131;376132;376133;376134;376135;376136;376137;376138;376139;376140;376141 296770;296771;296772;296773;296774;296775;296776;296777;296778;296779;296780 296774 8 RTPVSYQNTMSR Unmodified 1438.6987 0.69869638 488 O75376 NCOR1 Nuclear receptor corepressor 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 27.23 27.482 3 0.0033264 29520 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 33.424 18.324 43015000 0 0 0 0 2994500 0 0 4294500 0 7457500 8362800 0 3295100 3646200 12965000 44864 488 40207 376142;376143;376144;376145;376146;376147;376148 296781;296782;296783;296784;296785 296781 5 RTQGVSTTDLVGR Unmodified 1388.7372 0.73719038 4009 Q99447 PCYT2 Ethanolamine-phosphate cytidylyltransferase yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 34.481 35.215 3 0.00311 37659 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.523 21.736 11481000 0 0 0 0 0 0 0 0 0 0 0 3069100 0 0 8412100 44865 4009 40208 376149;376150 296786 296786 1 RTQIVYSDDVYK Unmodified 1485.7464 0.74635808 1075 P18615 NELFE Negative elongation factor E yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 2 18 1 1 1 1 1 1 1 2 2 2 2 2 1 2 43.157 42.801 2;3 0.0024491 47871 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 49.929 44.613 557630000 130860000 0 24823000 10751000 13345000 24046000 23784000 19506000 30292000 37258000 56363000 67147000 29303000 22161000 67995000 44866 1075 40209 376151;376152;376153;376154;376155;376156;376157;376158;376159;376160;376161;376162;376163;376164;376165;376166;376167;376168;376169;376170 296787;296788;296789;296790;296791;296792;296793;296794;296795;296796;296797;296798;296799;296800 296795 13 RTQQMLHGLQR Unmodified 1366.7252 0.7251859 382 O60216 RAD21 Double-strand-break repair protein rad21 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 26.289 26.184 3 0.019778 28335 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 25.342 17.21 24059000 0 0 0 1796800 1636100 11361000 0 9265300 0 0 0 0 0 0 0 44867 382 40210 376171;376172;376173;376174 296801;296802 296801 2 RTREEEEDSTIEASDQVSDDTVEMPLPK Oxidation (M) 3221.4518 0.45177514 965 P12270 TPR Nucleoprotein TPR yes yes 0 1 2 By MS/MS By MS/MS 2 0 3 2 1 62.986 56.205 3;4 6.1947E-08 70519 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 59.282 57.333 34225000 27928000 0 6296700 0 0 0 0 0 0 0 0 0 0 0 0 44868 965 40211 376175;376176;376177 296803;296804;296805;296806 296805 1270 4 RTREEEEDSTIEASDQVSDDTVEMPLPK Unmodified 3205.4569 0.45686052 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 2 By MS/MS 2 0 2 2 76.824 68.693 3;4 7.3297E-67 90536 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 126.46 120.36 59700000 59700000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44869 965 40211 376178;376179 296807;296808 296808 2 RTRSEGGGTGESSQGGTSK Unmodified 1837.8514 0.85144487 4415 Q9H6E5 TUT1 Speckle targeted PIP5K1A-regulated poly(A) polymerase yes yes 0 0 2 By MS/MS 2 0 1 1 2.1086 -1.1859 3 0.0018442 2204 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.053 34.635 7588400 7588400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44870 4415 40212 376180 296809 296809 0 RTSAQCGDVITDSPTHK Unmodified 1871.8796 0.87957387 2466 Q14CZ0 C16orf72 UPF0472 protein C16orf72 yes yes 0 0 1 By MS/MS 2 0 1 1 27.851 22.462 3 0.00031733 31634 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.475 49.642 9037900 9037900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44871 2466 40213 376181 296810 296810 1 RTSFDDRLEDDDFDLIEENLGVK Unmodified 2740.2828 0.28278297 3038 Q7KZ85 SUPT6H Transcription elongation factor SPT6 yes yes 0 0 2 By MS/MS 2 0 2 2 93.694 85.563 3;4 9.2486E-14 110754 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.606 77.249 17856000 17856000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44872 3038 40214 376182;376183 296811;296812 296811 2 RTSIETNIR Unmodified 1088.5938 0.5938206 1007 P14859;Q9UKI9 POU2F1;POU2F3 POU domain, class 2, transcription factor 1;POU domain, class 2, transcription factor 3 yes no 0 0 1 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.586 21.791 2 0.034816 22850 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 87.895 52.694 334590000 0 0 0 12284000 14772000 23802000 21511000 24746000 18615000 32727000 30072000 36627000 46929000 30601000 41900000 44873 1007 40215 376184;376185;376186;376187;376188;376189;376190;376191;376192;376193;376194;376195 296813;296814;296815 296813 1 RTSLSAEDAEVTK Unmodified 1405.7049 0.7048872 4814 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.68 1.57 1 24 1 2 2 2 2 2 2 2 2 2 2 2 2 27.34 27.402 2;3 1.946E-07 28828 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 79.652 65.843 375130000 0 0 7702400 17387000 20347000 21994000 24805000 30493000 19596000 24207000 36563000 56610000 34635000 28290000 52503000 44874 4814 40216 376196;376197;376198;376199;376200;376201;376202;376203;376204;376205;376206;376207;376208;376209;376210;376211;376212;376213;376214;376215;376216;376217;376218;376219;376220 296816;296817;296818;296819;296820;296821;296822;296823;296824;296825;296826;296827;296828;296829;296830;296831 296828 12 RTSMETALALEK Unmodified 1348.7021 0.70205043 3437 Q8NEZ5 FBXO22 F-box only protein 22 yes yes 0 0 1 By MS/MS 2 0 1 1 60.795 52.554 2 0.0014285 71276 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.258 53.953 14841000 14841000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44875 3437 40217 376221 296832;296833;296834 296834 3 RTSMETALALEK Oxidation (M) 1364.697 0.69696505 3437 Q8NEZ5 FBXO22 F-box only protein 22 yes yes 0 1 1 By MS/MS By MS/MS 2 0 3 2 1 40.511 34.872 2;3 0.0080704 48216 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.108 37.533 34880000 29550000 0 5329900 0 0 0 0 0 0 0 0 0 0 0 0 44876 3437 40217 376222;376223;376224 296835;296836;296837 296835 4976 1 RTSPQVLGSILK Unmodified 1297.7718 0.77178497 3091 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 yes yes 0 0 1 By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 65.052 65.111 3 0.0065165 73419 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.685 21.417 36231000 0 0 0 1735800 1315100 3402000 3137000 3447600 3706000 0 0 4617800 3090300 2998200 8781700 44877 3091 40218 376225;376226;376227;376228;376229;376230;376231;376232;376233;376234 296838 296838 1 RTSSAQVEGGVHSLHSYEK Unmodified 2071.0083 0.0082798605 964 P12268 IMPDH2 Inosine-5'-monophosphate dehydrogenase 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.87 3.54 4 11 2 1 1 1 1 1 1 1 1 2 1 2 31.851 30.698 3;4 4.598E-84 31332 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 161.04 134.56 628240000 247750000 17878000 4164100 0 0 23422000 8280500 17134000 13238000 19731000 25902000 58836000 0 42981000 148920000 44878 964 40219 376235;376236;376237;376238;376239;376240;376241;376242;376243;376244;376245;376246;376247;376248;376249 296839;296840;296841;296842;296843;296844;296845;296846;296847;296848;296849;296850;296851;296852;296853 296846 13 RTTAENEFVMLK Unmodified 1437.7286 0.72859953 74 CON__P13647;P13647 KRT5 Keratin, type II cytoskeletal 5 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 4 24 1 2 1 2 2 2 2 2 2 2 2 2 2 2 2 58.555 57.997 2;3 5.7844E-23 65457 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 155 95.652 + 3889300000 93164000 9296800 9780300 828940000 132630000 417270000 119630000 335860000 143170000 321490000 317410000 186270000 596110000 211950000 166340000 44879 74 40220 376250;376251;376252;376253;376254;376255;376256;376257;376258;376259;376260;376261;376262;376263;376264;376265;376266;376267;376268;376269;376270;376271;376272;376273;376274;376275;376276;376277 296854;296855;296856;296857;296858;296859;296860;296861;296862;296863;296864;296865;296866;296867;296868;296869;296870;296871;296872;296873;296874;296875;296876;296877;296878;296879;296880;296881;296882;296883;296884;296885;296886;296887;296888;296889;296890;296891 296861 32 RTTAENEFVMLK Oxidation (M) 1453.7235 0.72351415 74 CON__P13647;P13647 KRT5 Keratin, type II cytoskeletal 5 no no 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.89 2.72 3 1 24 1 2 1 3 3 2 2 3 2 1 2 1 2 1 2 49.627 48.875 2;3 2.957E-06 55819 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 129.85 102.37 + 3544700000 138160000 32641000 41417000 1100100000 275120000 102530000 203170000 434630000 203810000 105000000 249290000 66254000 389730000 36962000 165830000 44880 74 40220 376278;376279;376280;376281;376282;376283;376284;376285;376286;376287;376288;376289;376290;376291;376292;376293;376294;376295;376296;376297;376298;376299;376300;376301;376302;376303;376304;376305 296892;296893;296894;296895;296896;296897;296898;296899;296900;296901;296902;296903;296904;296905;296906;296907;296908;296909;296910;296911;296912;296913;296914;296915;296916;296917 296912 103 18 RTTAENEFVMLKK Oxidation (M) 1581.8185 0.81847717 74 CON__P13647;P13647 KRT5 Keratin, type II cytoskeletal 5 no no 0 1 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 2 1 1 2 1 2 2 2 2 1 38.577 38.696 3 4.0697E-11 43381 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 119.25 112.57 + 305050000 0 0 0 94815000 7218600 4460700 25858000 39390000 12947000 23513000 0 51170000 39161000 6514000 0 44881 74 40221 376306;376307;376308;376309;376310;376311;376312;376313;376314;376315;376316;376317;376318;376319;376320;376321 296918;296919;296920;296921;296922;296923;296924;296925;296926;296927;296928;296929 296927 103 9 RTTAENEFVMLKK Unmodified 1565.8236 0.82356254 74 CON__P13647;P13647 KRT5 Keratin, type II cytoskeletal 5 no no 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 45.516 45.872 3 0.001688 51465 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 68.83 48.245 + 98850000 0 0 0 0 0 0 0 30823000 0 10373000 0 41080000 16574000 0 0 44882 74 40221 376322;376323;376324;376325 296930;296931;296932 296931 3 RTTDVMFGGK Unmodified 1110.5492 0.5491786 377 O43865 AHCYL1 Putative adenosylhomocysteinase 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 37.495 32.534 2 0.00011169 45786 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 153.05 112.78 338750000 308540000 19045000 11170000 0 0 0 0 0 0 0 0 0 0 0 0 44883 377 40222 376326;376327;376328 296933;296934;296935 296934 2 RTTDVMFGGK Oxidation (M) 1126.5441 0.54409322 377 O43865 AHCYL1 Putative adenosylhomocysteinase 2 yes yes 0 1 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 25.26 20.597 2 0.02528 27973 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.726 28.763 328700000 314240000 14460000 0 0 0 0 0 0 0 0 0 0 0 0 0 44884 377 40222 376329;376330;376331 296936;296937 296937 0 RTTEDDIPTLPTSEHK Unmodified 1838.901 0.90102082 259 O15151 MDM4 Protein Mdm4 yes yes 0 0 1 By MS/MS 2 0 1 1 51.256 47.335 3 0.0021948 59526 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 54.281 37.062 3744100 0 0 3744100 0 0 0 0 0 0 0 0 0 0 0 0 44885 259 40223 376332 296938 296938 1 RTTLVDSRTSVTDVK Unmodified 1676.9057 0.90571227 3809 Q96EE3 SEH1L Nucleoporin SEH1 yes yes 0 0 2 By MS/MS 2 0 1 1 42.66 35.924 3 0.012829 49375 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.843 28.04 29589000 29589000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44886 3809 40224 376333 296939 296939 1 RTTSPSSDTDLLDRSASK Unmodified 1935.9498 0.94976193 3962 Q96QT6 PHF12 PHD finger protein 12 yes yes 0 0 2 By MS/MS 2 0 1 1 41.709 34.983 3 0.0012502 48223 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.152 45.713 16788000 16788000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44887 3962 40225 376334 296940 296940 1 RTTVVAQLK Unmodified 1014.6186 0.61857879 1809 P60228 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.719 24.922 2 0.04529 25058 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.455 28.052 220570000 0 0 0 13327000 10166000 18747000 18390000 16810000 12588000 17887000 19000000 21137000 20334000 21980000 30199000 44888 1809 40226 376335;376336;376337;376338;376339;376340;376341;376342;376343;376344;376345;376346 296941 296941 0 RTVAAPSVFIFPPSDEQLK Unmodified 2101.1208 0.12079042 747 P01834 IGKC Ig kappa chain C region yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 84.098 84.14 3 1.7587E-05 97227 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 62.739 62.739 107620000 0 0 0 10041000 4778600 6528600 0 36813000 0 19196000 8130100 9444700 5377900 3622100 3688700 44889 747 40227 376347;376348;376349;376350;376351;376352;376353;376354;376355;376356 296942;296943;296944;296945;296946;296947;296948;296949;296950;296951;296952;296953;296954 296948 13 RTVDLSSHLAK Unmodified 1225.6779 0.67788459 788 P04843 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.095 29.286 3 6.2594E-06 32235 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 108.72 101.04 514890000 0 0 0 33389000 21570000 35562000 30575000 41272000 42616000 47951000 59524000 47392000 59901000 53687000 41449000 44890 788 40228 376357;376358;376359;376360;376361;376362;376363;376364;376365;376366;376367;376368 296955;296956;296957;296958;296959;296960;296961;296962;296963;296964;296965;296966 296965 12 RTVETEAVQMLK Unmodified 1403.7442 0.74424959 2442 Q14738 PPP2R5D Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.92 3.89 5 8 2 1 2 2 1 1 1 1 2 57.819 55.832 2;3 1.2731E-15 70997 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 126.76 110.23 296610000 222400000 0 26891000 0 0 12914000 0 0 0 0 5783200 0 4005300 4792900 19827000 44891 2442 40229 376369;376370;376371;376372;376373;376374;376375;376376;376377;376378;376379;376380;376381 296967;296968;296969;296970;296971;296972;296973;296974;296975;296976;296977;296978;296979;296980 296977 12 RTVETEAVQMLK Oxidation (M) 1419.7392 0.73916421 2442 Q14738 PPP2R5D Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 4.08 3.43 8 1 3 4 2 3 1 1 1 42.036 38.041 2;3 0.00037011 52215 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.522 66.422 325370000 211750000 23528000 71689000 0 0 0 0 2592600 3982800 11823000 0 0 0 0 0 44892 2442 40229 376382;376383;376384;376385;376386;376387;376388;376389;376390;376391;376392;376393 296981;296982;296983;296984;296985;296986;296987 296984 4009 6 RTVGDQMK Unmodified 933.4702 0.4702 601 O94906 PRPF6 Pre-mRNA-processing factor 6 yes yes 0 0 1 By MS/MS 2 0 1 1 8.6915 5.0529 2 0.037315 8883 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 112.41 61.445 92467000 92467000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44893 601 40230 376394 296988 296988 1 RTVLEGSTASTSPADHSALPNQSLTVR Unmodified 2794.4209 0.4209482 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 1 2 1 2 1 2 1 2 2 2 59.583 59.798 3;4 1.1932E-50 67366 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.24 94.143 223250000 0 0 0 0 8795800 11510000 15525000 11283000 19344000 18217000 27423000 22009000 22632000 27984000 38525000 44894 3443 40231 376395;376396;376397;376398;376399;376400;376401;376402;376403;376404;376405;376406;376407;376408;376409;376410;376411 296989;296990;296991;296992;296993;296994;296995;296996;296997;296998;296999;297000;297001;297002;297003;297004;297005;297006;297007;297008;297009;297010;297011 296995 22 RTVSQQSFDGVSLDSSGPEDR Unmodified 2266.0462 0.046181509 2867 Q6BDS2 UHRF1BP1 UHRF1-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.406 58.521 3 4.7105E-59 66266 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 126.51 111.42 200480000 0 0 0 8574100 13202000 17808000 16610000 16799000 12613000 14352000 18104000 21700000 20970000 14998000 24756000 44895 2867 40232 376412;376413;376414;376415;376416;376417;376418;376419;376420;376421;376422;376423 297012;297013;297014;297015;297016;297017;297018;297019;297020;297021;297022;297023 297021 12 RTVTAAGAENIQQK Unmodified 1485.79 0.78995423 2647 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21.493 20.832 3 3.3519E-33 30099 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 125.22 105.54 682520000 244490000 22105000 26396000 22384000 18101000 39688000 31406000 22803000 23330000 35627000 36686000 41263000 37378000 23898000 56973000 44896 2647 40233 376424;376425;376426;376427;376428;376429;376430;376431;376432;376433;376434;376435;376436;376437;376438 297024;297025;297026;297027;297028;297029;297030;297031 297028 8 RTVYVYLEK Unmodified 1169.6445 0.64445919 3326 Q8N3U4 STAG2 Cohesin subunit SA-2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 45.87 46.126 2 0.041992 50553 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.645 66.501 26457000 0 0 0 0 0 6711700 0 3790400 3270500 3974300 0 0 0 0 8709900 44897 3326 40234 376439;376440;376441;376442;376443 297032 297032 1 RTWNYLEFEEEENK Unmodified 1885.8483 0.84825697 3696 Q92990 GLMN Glomulin yes yes 0 0 1 By MS/MS 2 0 1 1 79.345 71.215 3 0.00057468 93536 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.261 56.546 12192000 12192000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44898 3696 40235 376444 297033 297033 1 RTYEEGLK Unmodified 994.50836 0.50835964 1313 P31948 STIP1 Stress-induced-phosphoprotein 1 yes yes 0 0 1 By MS/MS By MS/MS By matching 2.25 0.433 3 1 1 2 1 17.564 14.671 2 0.018886 18529 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 124.08 59.042 1685400000 628970000 1056300000 72635 0 0 0 0 0 0 0 0 0 0 0 0 44899 1313 40236 376445;376446;376447;376448 297034;297035 297035 1 RVAAPQDGSPR Unmodified 1152.6 0.59996862 4524 Q9HD15 SRA1 Steroid receptor RNA activator 1 yes yes 0 0 1 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching 10 0 8 1 1 1 1 1 1 1 1 9.9265 10.063 3 0.0033009 8415 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 38.875 25.783 28601000 0 0 0 1423600 1546300 0 0 1529800 1500300 0 0 6135100 2264400 4245100 9956000 44900 4524 40237 376449;376450;376451;376452;376453;376454;376455;376456 297036;297037 297036 2 RVAAPQDGSPRVPASETSPGPPPMGPPPPSSK Oxidation (M) 3163.572 0.57204589 4524 Q9HD15 SRA1 Steroid receptor RNA activator 1 yes yes 0 1 2 By MS/MS 2 0 1 1 56.109 47.962 4 4.2548E-10 65521 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.942 44.282 15376000 15376000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44901 4524 40238 376457 297038 297038 5946 1 RVAAPQDGSPRVPASETSPGPPPMGPPPPSSK Unmodified 3147.5771 0.57713127 4524 Q9HD15 SRA1 Steroid receptor RNA activator 1 yes yes 0 0 2 By MS/MS 2 0 1 1 64.792 56.504 4 3.4924E-45 75950 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.639 92.271 21165000 21165000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44902 4524 40238 376458 297039 297039 1 RVAGGPQMIQLSLDGK Unmodified 1668.8981 0.89812447 2256 Q13228 SELENBP1 Selenium-binding protein 1 yes yes 0 0 1 By MS/MS By matching By MS/MS 7.33 3.77 1 2 1 1 1 75.051 72.527 3 0.00029849 94737 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.481 57.031 47146000 28717000 0 0 0 0 0 0 0 0 0 0 0 0 2599800 15829000 44903 2256 40239 376459;376460;376461 297040;297041 297041 2 RVAGGPQMIQLSLDGK Oxidation (M) 1684.893 0.89303909 2256 Q13228 SELENBP1 Selenium-binding protein 1 yes yes 0 1 1 By MS/MS By MS/MS 6 4 1 1 1 1 65.52 61.68 3 0.00061238 82824 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.814 49.778 46755000 25878000 0 0 0 0 0 0 0 0 0 0 0 0 0 20877000 44904 2256 40239 376462;376463 297042;297043 297043 3677 1 RVAGSVTELIQAAEAMK Oxidation (M) 1788.9404 0.94038322 5187 Q9Y490 TLN1 Talin-1 yes yes 0 1 1 By MS/MS By matching By MS/MS 10 0 3 1 1 1 80.392 80.566 3 0.0010942 92696 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.323 37.221 17391000 0 0 0 0 0 0 0 0 0 4793000 2541100 0 0 0 10057000 44905 5187 40240 376464;376465;376466 297044 297044 6567 1 RVALSDDETK Unmodified 1132.5724 0.57241646 2489 Q15054 POLD3 DNA polymerase delta subunit 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14.958 14.598 2 0.0052553 13322 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 122.28 68.313 86968000 8252000 0 15536000 4548200 3261000 3349900 3159500 3566600 4058300 7142300 8293600 7693300 7662900 3836600 6607900 44906 2489 40241 376467;376468;376469;376470;376471;376472;376473;376474;376475;376476;376477;376478;376479;376480 297045;297046;297047;297048;297049;297050;297051;297052;297053;297054;297055;297056 297048 12 RVALVTFNSAAHNK Unmodified 1526.8318 0.83175947 3170 Q86VP6 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 1 By MS/MS 10 0 1 1 41.697 41.742 3 0.0046952 46658 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 24.225 19.13 5598500 0 0 0 0 0 5598500 0 0 0 0 0 0 0 0 0 44907 3170 40242 376481 297057 297057 1 RVASGPSPGEGISPQSAQAPQAPGDNHVVPVLR Unmodified 3274.6807 0.68068514 2444 Q14764 MVP Major vault protein yes yes 0 0 1 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 69.218 69.315 4 1.0319E-38 79538 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 66.479 63.848 52041000 0 0 0 0 2322500 5206700 4094300 3879700 5241600 6445200 0 0 6168800 5812800 12869000 44908 2444 40243 376482;376483;376484;376485;376486;376487;376488;376489;376490 297058;297059;297060;297061;297062;297063;297064;297065 297063 8 RVATPVDWK Unmodified 1070.5873 0.58727866 1261 P30041 PRDX6 Peroxiredoxin-6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.17 3.85 2 1 3 1 1 1 1 1 1 43.794 41.291 2 0.034416 52563 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 91.853 64.599 3734400000 3435500000 19823000 41575000 0 0 0 0 0 0 0 118170000 89583000 29732000 0 0 44909 1261 40244 376491;376492;376493;376494;376495;376496 297066;297067;297068;297069 297066 2 RVATPVDWKDGDSVMVLPTIPEEEAK Unmodified 2881.4532 0.45315953 1261 P30041 PRDX6 Peroxiredoxin-6 yes yes 0 0 2 By MS/MS 2 0 1 1 90.086 81.956 4 8.9939E-05 106467 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.494 40.955 9854900 9854900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44910 1261 40245 376497 297070;297071 297070 2 RVCEEIAIIPSK Unmodified 1413.765 0.76498503 871 P08708 RPS17 40S ribosomal protein S17 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.6 3.56 7 4 24 4 4 3 2 2 1 2 2 2 2 2 2 2 3 2 60.667 59.054 2;3 0.00011513 65270 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 127.76 111.09 2476700000 1552400000 59173000 158850000 35745000 43150000 6491600 52246000 53778000 46295000 53757000 65673000 94759000 80845000 78210000 95300000 44911 871 40246 376498;376499;376500;376501;376502;376503;376504;376505;376506;376507;376508;376509;376510;376511;376512;376513;376514;376515;376516;376517;376518;376519;376520;376521;376522;376523;376524;376525;376526;376527;376528;376529;376530;376531;376532 297072;297073;297074;297075;297076;297077;297078;297079;297080;297081;297082;297083;297084;297085;297086;297087;297088;297089;297090;297091;297092;297093;297094;297095;297096;297097 297079 21 RVCEEIAIIPSKK Unmodified 1541.8599 0.85994805 871 P08708 RPS17 40S ribosomal protein S17 yes yes 0 0 2 By MS/MS 2 0 1 1 59.949 51.723 3 0.016987 70123 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.3 25.619 6825500 6825500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44912 871 40247 376533 297098 297098 1 RVDAENRLQTMK Oxidation (M) 1475.7515 0.75146023 757 P02545 LMNA Prelamin-A/C;Lamin-A/C yes yes 0 1 2 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 14.632 14.807 3 0.030586 14393 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 42.809 22.383 46953000 0 0 0 9212900 1702800 0 2467400 3589100 2854300 4099000 8334400 4833000 2866000 0 6993600 44913 757 40248 376534;376535;376536;376537;376538;376539;376540;376541;376542;376543 297099 297099 908 1 RVDAENRLQTMK Unmodified 1459.7565 0.75654561 757 P02545 LMNA Prelamin-A/C;Lamin-A/C yes yes 0 0 2 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 26.162 26.227 3 0.028259 28205 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 45.115 16.351 29734000 0 0 0 14341000 0 0 3243000 0 5090900 0 0 0 0 7059200 0 44914 757 40248 376544;376545;376546;376547 297100 297100 0 RVDALNDEIR Unmodified 1199.6258 0.62584901 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 2 1 1 1 1 1 1 1 35.554 35.729 3 0.0067996 38024 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.741 27.871 110890000 0 0 0 6906200 5438000 11003000 9276700 7203000 0 7354400 9099900 11030000 8922300 7982000 26675000 44915 5071 40249 376548;376549;376550;376551;376552;376553;376554;376555;376556;376557;376558;376559 297101;297102;297103;297104;297105;297106;297107;297108;297109;297110;297111 297104 6 RVDATAGWSAAGK Unmodified 1288.6524 0.65239812 2179 Q10570 CPSF1 Cleavage and polyadenylation specificity factor subunit 1 yes yes 0 0 1 By MS/MS 2 0 1 1 39.692 33.069 2 0.023176 45998 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.829 20.742 11674000 11674000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44916 2179 40250 376560 297112 297112 0 RVDIDEFDENK Unmodified 1378.6365 0.63647328 4080 Q9BPX5 ARPC5L Actin-related protein 2/3 complex subunit 5-like protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 45.761 46.258 3 0.016525 50879 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.006 15.55 28051000 0 0 0 0 0 5604700 0 0 0 0 7808300 6729500 0 0 7909000 44917 4080 40251 376561;376562;376563;376564 297113;297114 297113 2 RVDPDVAQHWAK Unmodified 1420.7211 0.72114638 4748 Q9NYR9 NKIRAS2 NF-kappa-B inhibitor-interacting Ras-like protein 2 yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 37.825 38.061 3 0.0035429 40925 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.809 20.647 57698000 0 0 0 4221700 0 6291000 3856900 4834800 0 0 0 11140000 10421000 5763600 11169000 44918 4748 40252 376565;376566;376567;376568;376569;376570;376571;376572 297115;297116;297117;297118;297119 297115 5 RVDQLKSDQSR Unmodified 1330.6953 0.69532556 780 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.0644 7.188 3 0.0056883 5115 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 88.24 80.875 + 102940000 0 0 0 12359000 5094100 7505900 8145300 15162000 4949400 10033000 10550000 6277700 9973000 8130500 4763500 44919 780 40253 376573;376574;376575;376576;376577;376578;376579;376580;376581;376582;376583;376584 297120 297120 0 RVDSITAAGGEGPFPTSR Unmodified 1816.9068 0.9067749 5191 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 55.976 56.152 3 0.0027534 63402 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 25.496 15.498 51328000 0 0 0 0 0 10147000 8993600 0 6262200 14431000 11495000 0 0 0 0 44920 5191 40254 376585;376586;376587;376588;376589 297121;297122;297123 297122 3 RVEAAQETVADYQQTIK Unmodified 1948.9854 0.98541915 2391 Q14203 DCTN1 Dynactin subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 57.384 51.687 3 1.3051E-26 64492 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 104.61 94.412 128580000 10209000 61727000 56648000 0 0 0 0 0 0 0 0 0 0 0 0 44921 2391 40255 376590;376591;376592;376593 297124;297125;297126;297127;297128;297129 297129 6 RVEDAYILTCNVSLEYEK Unmodified 2201.0674 0.067434223 1410 P40227 CCT6A T-complex protein 1 subunit zeta yes yes 0 0 1 By MS/MS By MS/MS 2.67 0.471 1 2 2 1 81.987 76.936 3 8.94E-59 98344 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 143.46 134.36 369890000 366400000 3484000 0 0 0 0 0 0 0 0 0 0 0 0 0 44922 1410 40256 376594;376595;376596 297130;297131;297132;297133;297134 297134 5 RVEDSSSNGQAHIHVVGVK Unmodified 2018.0293 0.029349654 2852 Q68CP9 ARID2 AT-rich interactive domain-containing protein 2 yes yes 0 0 1 By MS/MS 2 0 1 1 39.374 32.813 4 0.0097443 45521 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 29.603 22.712 7786000 7786000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44923 2852 40257 376597 297135 297135 1 RVEDVLGK Unmodified 914.51853 0.5185304 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 29.757 25.366 2 0.01201 31771 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 119.41 38.944 720340000 343200000 153610000 223530000 0 0 0 0 0 0 0 0 0 0 0 0 44924 2392 40258 376598;376599;376600;376601 297136;297137;297138 297138 1 RVEEDIQQQK Unmodified 1271.647 0.64697839 1029 P15924 DSP Desmoplakin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 2 1 2 2 1 2 2 12.415 12.563 2;3 5.1456E-72 11531 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 222.42 94.14 491940000 0 0 0 88311000 29775000 23889000 28580000 96229000 21540000 27215000 32232000 64460000 33133000 19586000 26988000 44925 1029 40259 376602;376603;376604;376605;376606;376607;376608;376609;376610;376611;376612;376613;376614;376615;376616;376617;376618;376619;376620;376621;376622;376623 297139;297140;297141;297142;297143;297144;297145;297146;297147;297148;297149;297150;297151;297152;297153 297152 1 RVEGPGSLGLEESGSRR Unmodified 1784.9129 0.91292291 2217 Q12972 PPP1R8 Nuclear inhibitor of protein phosphatase 1;Activator of RNA decay yes yes 0 0 2 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 37.373 37.636 3 0.0062552 40221 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.145 45.228 61626000 0 0 0 0 1431400 0 4423500 4760500 2576500 4987900 8963400 11423000 5512700 3201200 14346000 44926 2217 40260 376624;376625;376626;376627;376628;376629;376630;376631;376632;376633 297154;297155 297154 2 RVEIMEEESEQ Unmodified 1377.6082 0.60820962 1741 P54578 USP14 Ubiquitin carboxyl-terminal hydrolase 14 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 38.64 38.913 2 0.00022924 42932 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 136.63 113.21 119800000 0 0 0 0 2710700 17032000 0 4050500 0 6916700 21394000 16247000 5680100 8302000 37463000 44927 1741 40261 376634;376635;376636;376637;376638;376639;376640;376641;376642 297156;297157;297158;297159;297160;297161;297162;297163 297159 8 RVEIMEEESEQ Oxidation (M) 1393.6031 0.60312424 1741 P54578 USP14 Ubiquitin carboxyl-terminal hydrolase 14 yes yes 0 1 1 By MS/MS 10 0 1 1 24.809 25.477 2 0.028456 26098 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.228 64.497 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44928 1741 40261 376643 297164 297164 1 RVEISAPSNFEHR Unmodified 1540.7746 0.77463852 714 O96013 PAK4 Serine/threonine-protein kinase PAK 4 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 43.647 43.795 3 0.00062623 48978 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 60.937 48.771 187350000 0 0 0 7414100 5478700 25752000 11366000 15739000 20675000 15064000 0 25117000 20361000 17063000 23320000 44929 714 40262 376644;376645;376646;376647;376648;376649;376650;376651;376652;376653;376654 297165;297166;297167;297168;297169;297170;297171;297172 297166 8 RVELEAALQQAK Unmodified 1354.7569 0.75686319 77 CON__P19013;P19013 KRT4 Keratin, type II cytoskeletal 4 yes no 0 0 1 By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 11 1 2 3 1 1 2 1 52.545 52.692 2;3 0.0036133 60217 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 32.43 22.897 + 215950000 0 0 0 4396000 0 0 57006000 109020000 3110300 0 0 6743600 33224000 2451000 0 44930 77 40263 376655;376656;376657;376658;376659;376660;376661;376662;376663;376664;376665 297173;297174;297175;297176 297175 4 RVENSIPAAGETQNVEVAAGPAGK Unmodified 2364.2034 0.20335085 2475 Q15020 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 54.486 54.617 3 6.8864E-79 61911 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 125.62 108.2 204870000 0 0 0 7226200 8972900 13080000 13611000 13955000 8331300 20268000 22195000 19488000 25384000 21231000 31131000 44931 2475 40264 376666;376667;376668;376669;376670;376671;376672;376673;376674;376675;376676;376677 297177;297178;297179;297180;297181;297182;297183;297184;297185;297186;297187;297188;297189;297190;297191 297183 15 RVEPLRNELQK Unmodified 1380.7837 0.78374664 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.109 28.303 3 0.02286 30402 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 60.49 32.826 535780000 0 0 0 40357000 12441000 58686000 21504000 33103000 43112000 25882000 44291000 50448000 84642000 45607000 75708000 44932 2392 40265 376678;376679;376680;376681;376682;376683;376684;376685;376686;376687;376688;376689 297192;297193;297194 297192 0 RVEQTTLK Unmodified 973.55564 0.55564418 4667 Q9NVG8 TBC1D13 TBC1 domain family member 13 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 11.811 8.6528 2 0.043117 10945 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 101.64 14.69 224200000 163460000 29586000 31156000 0 0 0 0 0 0 0 0 0 0 0 0 44933 4667 40266 376690;376691;376692 297195 297195 1 RVESPVLPPVLVPR Unmodified 1556.9402 0.94024728 4053;2580 Q99717;Q15797 SMAD5;SMAD1 Mothers against decapentaplegic homolog 5;Mothers against decapentaplegic homolog 1 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 80.852 80.912 2;3 0.0013319 93537 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 50.088 43.359 442970000 0 0 0 13511000 13253000 46529000 23895000 36237000 32558000 43856000 44649000 43114000 31377000 31037000 82957000 44934 4053;2580 40267 376693;376694;376695;376696;376697;376698;376699;376700;376701;376702;376703;376704;376705;376706;376707;376708;376709;376710;376711;376712;376713;376714;376715;376716 297196;297197;297198;297199;297200;297201;297202;297203;297204;297205;297206;297207;297208 297203 8 RVETNQDWSLMCPNECPGLDEVWGEEFEK Unmodified 3553.5225 0.52245444 1171 P23921 RRM1 Ribonucleoside-diphosphate reductase large subunit yes yes 0 0 1 By MS/MS 2 0 1 1 95.527 87.396 3 6.5099E-16 112979 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.404 69.03 21643000 21643000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44935 1171 40268 376717 297209;297210 297209 2 RVETSEHFR Unmodified 1159.5734 0.57341951 1447 P42167 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 11.385 11.474 3 0.0040923 9727 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 50.297 29.427 33695000 0 0 0 2158700 1823900 2861200 2924300 3076300 1770000 3195300 0 6202400 4688900 4993600 0 44936 1447 40269 376718;376719;376720;376721;376722;376723;376724;376725;376726;376727 297211;297212;297213 297212 3 RVETVSQTLRK Unmodified 1315.7572 0.75719754 3319 Q8N392 ARHGAP18 Rho GTPase-activating protein 18 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 18.143 18.152 3 0.03195 18536 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 56.936 50.015 41964000 0 0 0 5641000 2839000 11757000 4028800 5225400 5101400 7371100 0 0 0 0 0 44937 3319 40270 376728;376729;376730;376731;376732;376733;376734 297214 297214 0 RVEVNGEHATVR Unmodified 1365.7113 0.71130998 2582 Q15813 TBCE Tubulin-specific chaperone E yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 14.865 14.971 3 0.0072024 13563 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 39.509 27.588 91092000 0 0 0 6722200 3027400 11745000 9937700 3729400 4930400 14371000 0 12270000 10392000 13966000 0 44938 2582 40271 376735;376736;376737;376738;376739;376740;376741;376742;376743;376744 297215;297216;297217;297218;297219;297220 297217 6 RVFGWEEDEDF Unmodified 1427.5994 0.59935949 33 A6ZKI3 FAM127A Protein FAM127A no no 0 0 1 By MS/MS 2 0 1 1 84.661 76.531 2 0.017516 99910 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.247 85.66 27588000 27588000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44939 33 40272 376745 297221 297221 1 RVFITDDFHDMMPK 2 Oxidation (M) 1782.8069 0.8069262 1002 P14625 HSP90B1 Endoplasmin yes yes 0 2 1 By matching By MS/MS 10 0 2 1 1 51.115 51.815 3 0.00066531 57402 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.614 35.865 40480000 0 0 0 0 0 0 0 0 0 0 0 12952000 0 0 27528000 44940 1002 40273 376746;376747 297222 297222 1364;1365 1 RVFSDINASHK Unmodified 1272.6575 0.65748349 526 O75635 SERPINB7 Serpin B7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 22.086 22.146 3 0.01191 23478 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 58.172 47.42 43029000 0 0 0 18158000 0 0 3442600 15862000 2669500 2896700 0 0 0 0 0 44941 526 40274 376748;376749;376750;376751;376752 297223 297223 0 RVGDNDFLEVR Unmodified 1318.663 0.6629628 124 O00178 GTPBP1 GTP-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 54.332 54.678 3 0.0080169 61473 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 34.179 24.335 14621000 0 0 0 0 0 5196400 0 0 0 0 0 9425000 0 0 0 44942 124 40275 376753;376754 297224;297225 297225 2 RVGDPPQPLPEEPMEVQGAER Oxidation (M) 2346.1274 0.12740872 1502 P46379 BAG6 Large proline-rich protein BAG6 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 56.419 56.572 3 2.2675E-06 63844 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 60.621 53.368 92570000 0 0 0 7270500 0 12779000 9231700 0 0 14043000 0 17727000 21150000 0 10370000 44943 1502 40276 376755;376756;376757;376758;376759;376760;376761 297226;297227;297228;297229;297230;297231;297232;297233 297228 2373 8 RVGDPPQPLPEEPMEVQGAER Unmodified 2330.1325 0.1324941 1502 P46379 BAG6 Large proline-rich protein BAG6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 65.417 65.574 3 8.4219E-08 74909 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 66.644 62.118 79556000 0 0 0 0 3006800 5829000 5565400 9247400 3877900 5525700 9346600 10695000 5948300 9005800 11508000 44944 1502 40276 376762;376763;376764;376765;376766;376767;376768;376769;376770;376771;376772 297234;297235;297236;297237;297238;297239;297240;297241;297242;297243;297244;297245;297246;297247 297237 14 RVGFQYEGTYK Unmodified 1346.6619 0.66190017 947 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.95 2.64 2 1 19 3 1 1 2 2 1 1 2 2 2 1 2 2 42.97 42.209 2;3 1.8162E-15 45725 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 152.54 109.94 895000000 493880000 0 0 8552300 5504200 23671000 13622000 14743000 9104100 30606000 46655000 58860000 6122300 44174000 139510000 44945 947 40277 376773;376774;376775;376776;376777;376778;376779;376780;376781;376782;376783;376784;376785;376786;376787;376788;376789;376790;376791;376792;376793;376794 297248;297249;297250;297251;297252;297253;297254;297255;297256;297257;297258;297259;297260;297261;297262;297263;297264;297265;297266 297253 15 RVGMADANSPPK Oxidation (M) 1257.6136 0.61356977 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 7.8609 8.0052 3 0.0016347 5938 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 51.013 34.071 47547000 0 0 0 2783800 0 6141800 2659200 0 5431500 4464200 11683000 0 3876100 4907800 5599800 44946 1201 40278 376795;376796;376797;376798;376799;376800;376801;376802;376803 297267;297268;297269;297270;297271;297272 297269 1753 6 RVGMADANSPPK Unmodified 1241.6187 0.61865515 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 0 1 By MS/MS 10 0 1 1 17.557 17.526 3 0.046055 17735 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 32.933 17.303 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44947 1201 40278 376804 297273 297273 1 RVGNGEETPMIGDK Oxidation (M) 1517.7144 0.71440603 2294 Q13451 FKBP5 Peptidyl-prolyl cis-trans isomerase FKBP5;Peptidyl-prolyl cis-trans isomerase FKBP5, N-terminally processed yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 29.376 24.964 3 0.0038939 32052 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 46.41 33.43 32079000 11084000 0 20995000 0 0 0 0 0 0 0 0 0 0 0 0 44948 2294 40279 376805;376806 297274 297274 3756 1 RVGNGEETPMIGDK Unmodified 1501.7195 0.7194914 2294 Q13451 FKBP5 Peptidyl-prolyl cis-trans isomerase FKBP5;Peptidyl-prolyl cis-trans isomerase FKBP5, N-terminally processed yes yes 0 0 1 By MS/MS 2 0 1 1 35.702 32.318 3 0.015701 40578 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 37.654 20.453 21438000 0 0 21438000 0 0 0 0 0 0 0 0 0 0 0 0 44949 2294 40279 376807 297275 297275 1 RVGTASVLQPVK Unmodified 1253.7456 0.74557022 2656 Q2TAL8 QRICH1 Glutamine-rich protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.764 38.944 3 0.0017699 43189 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 39.267 25.678 186550000 0 0 0 7785200 7818800 14953000 10603000 12262000 11147000 15200000 19586000 23973000 16127000 16208000 30887000 44950 2656 40280 376808;376809;376810;376811;376812;376813;376814;376815;376816;376817;376818;376819 297276;297277;297278;297279;297280;297281;297282;297283;297284;297285;297286;297287 297280 12 RVGYLTGLPTTNSR Unmodified 1533.8263 0.82633974 3645 Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 56.651 56.956 3 0.006951 64997 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 35.037 15.643 34218000 0 0 0 0 0 0 3718100 0 0 0 5107500 0 5840500 6438000 13114000 44951 3645 40281 376820;376821;376822;376823;376824 297288;297289;297290;297291 297291 4 RVHMTWVQPR Oxidation (M) 1324.6823 0.68225846 5036 Q9UNM6 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes yes 0 1 1 By MS/MS By matching By matching 10 0 3 1 1 1 23.578 24.022 3 0.0019238 25984 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 61.353 51.666 18715000 0 0 0 0 0 10329000 0 0 0 0 0 4542000 0 0 3843500 44952 5036 40282 376825;376826;376827 297292 297292 6386 1 RVHPVSTMIK Unmodified 1166.6594 0.65939775 719 P00338 LDHA L-lactate dehydrogenase A chain yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 26.725 27.118 3 0.00083727 26165 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.672 58.078 193870000 0 0 0 0 0 0 5070300 6599500 0 0 31387000 22105000 0 22139000 106570000 44953 719 40283 376828;376829;376830;376831;376832;376833 297293;297294;297295;297296 297293 3 RVHQLEDDK Unmodified 1138.5731 0.57308516 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 8.4 3.2 3 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 6.5692 6.2764 3 0.0011217 4356 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 91.867 45.405 92033000 30123000 0 854320 2587500 5846800 5410900 9227200 5987700 8542600 3028300 3391500 5805200 2879900 3302400 5045600 44954 2556 40284 376834;376835;376836;376837;376838;376839;376840;376841;376842;376843;376844;376845;376846;376847;376848 297297;297298;297299;297300;297301;297302;297303;297304;297305 297300 8 RVHVTQEDFEMAVAK Oxidation (M) 1774.8672 0.86721827 1876 P62195 PSMC5 26S protease regulatory subunit 8 yes yes 0 1 1 By matching By MS/MS 10 0 2 1 1 47.571 48.021 3 0.00032206 53204 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 54.859 54.859 24227000 0 0 0 0 0 0 0 0 3643800 0 0 20583000 0 0 0 44955 1876 40285 376849;376850 297306;297307 297306 3042 2 RVIDYAVK Unmodified 962.55492 0.5549159 1394 P38117 ETFB Electron transfer flavoprotein subunit beta yes yes 0 0 1 By MS/MS 2 0 1 1 39.882 33.259 2 0.043032 46282 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 100.45 44.44 116970000 116970000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44956 1394 40286 376851 297308 297308 1 RVIEQLGGK Unmodified 998.58728 0.58727866 4917 Q9UI12 ATP6V1H V-type proton ATPase subunit H yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.236 22.44 2 0.032421 22901 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 91.867 47.75 136870000 0 0 0 5537900 3502900 14183000 8334200 6447800 6474700 18745000 14361000 18636000 12158000 11507000 16978000 44957 4917 40287 376852;376853;376854;376855;376856;376857;376858;376859;376860;376861;376862;376863 297309;297310;297311;297312 297311 2 RVIGDNPWTPEQLEQCK Unmodified 2069 2.33601E-05 2828 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 71.285 69.816 3 8.4644E-06 91596 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 92.264 72.013 105140000 79549000 0 0 0 0 5363200 0 0 2296800 0 0 0 0 4552400 13377000 44958 2828 40288 376864;376865;376866;376867;376868 297313;297314;297315;297316 297315 4 RVIISAPSADAPMFVMGVNHEK 2 Oxidation (M) 2400.193 0.19298586 782 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 0 2 1 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.14 3.83 5 9 4 1 1 1 1 1 2 1 2 70.117 69.105 3;4 1.6152E-43 79002 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 106.93 102.86 2839400000 613470000 116990 0 0 6289300 0 0 18492000 0 28642000 149620000 435090000 14448000 0 1573200000 44959 782 40289 376869;376870;376871;376872;376873;376874;376875;376876;376877;376878;376879;376880;376881;376882 297317;297318;297319;297320;297321;297322;297323;297324 297321 941;942 7 RVIISAPSADAPMFVMGVNHEK Oxidation (M) 2384.1981 0.19807124 782 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 0 1 1 By MS/MS By matching By matching By MS/MS By matching By MS/MS 8.22 3.33 2 7 1 1 1 1 1 4 76.133 74.892 3;4 2.2849E-35 85858 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 113.42 109.7 1244700000 78046000 23445000 0 0 0 7840100 0 6217000 0 0 19307000 0 0 0 1109900000 44960 782 40289 376883;376884;376885;376886;376887;376888;376889;376890;376891 297325;297326;297327;297328;297329 297328 941;942 4 RVIISAPSADAPMFVMGVNHEK Unmodified 2368.2032 0.20315662 782 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 0 0 1 By MS/MS By MS/MS 6 4 2 2 2 2 83.567 79.616 3;4 3.2688E-27 92134 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 92.565 89.556 241990000 38306000 0 0 0 0 0 0 0 0 0 0 0 0 0 203690000 44961 782 40289 376892;376893;376894;376895 297330;297331;297332;297333 297331 3 RVILGEGK Unmodified 870.5287 0.52870115 2447 Q14790 CASP8 Caspase-8;Caspase-8 subunit p18;Caspase-8 subunit p10 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 23.855 19.831 2 0.00086237 27522 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 159.46 90.362 902750000 886040000 10457000 6255300 0 0 0 0 0 0 0 0 0 0 0 0 44962 2447 40290 376896;376897;376898 297334 297334 1 RVIQEGRGELPDFQDGTK Unmodified 2044.0338 0.033766329 123 O00170 AIP AH receptor-interacting protein yes yes 0 0 2 By MS/MS By MS/MS 4.67 3.77 2 1 2 1 59.014 53.525 3;4 6.5529E-39 73303 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 142.39 104.16 48777000 42069000 0 0 0 0 6707900 0 0 0 0 0 0 0 0 0 44963 123 40291 376899;376900;376901 297335;297336;297337 297337 1 RVLDELTLAR Unmodified 1184.6877 0.68772099 56;70;84;76;68 CON__P02533;P02533;CON__P08779;P08779;CON__P19012;P19012;CON__Q04695;Q04695;CON__P08727;P08727 KRT14;KRT16;KRT15;KRT17;KRT19 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16;Keratin, type I cytoskeletal 15;Keratin, type I cytoskeletal 17;Keratin, type I cytoskeletal 19 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 22 2 2 2 1 2 2 2 2 2 2 2 1 61.707 61.784 2;3 0.0010966 70297 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.547 41.802 + 257670000 0 0 0 38402000 9090300 18644000 7328700 33626000 14683000 18066000 17665000 22965000 52459000 14301000 10443000 44964 56;70;76;84;68 40292 376902;376903;376904;376905;376906;376907;376908;376909;376910;376911;376912;376913;376914;376915;376916;376917;376918;376919;376920;376921;376922;376923 297338;297339;297340;297341;297342;297343;297344;297345;297346;297347;297348;297349 297347 10 RVLDELTLSK Unmodified 1172.6765 0.6764876 73;981;57 CON__P02535-1;CON__P13646-1;P13646;CON__ENSEMBL:ENSP00000377550 KRT13 Keratin, type I cytoskeletal 13 no no 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 55.726 55.856 2 0.012643 63374 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 93.111 49.303 + 25541000 0 0 0 0 0 0 10940000 14601000 0 0 0 0 0 0 0 44965 57;73;981 40293 376924;376925 297350;297351 297350 2 RVLDELTLTK Unmodified 1186.6921 0.69213767 72 CON__P13645;P13645 KRT10 Keratin, type I cytoskeletal 10 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 29 3 2 3 2 3 2 2 3 3 2 2 2 58.323 58.435 2;3 1.3353E-10 66587 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 136.96 112.87 + 6547200000 0 0 0 1170900000 231700000 507390000 311890000 572890000 318480000 565210000 492280000 1050400000 664180000 326720000 335110000 44966 72 40294 376926;376927;376928;376929;376930;376931;376932;376933;376934;376935;376936;376937;376938;376939;376940;376941;376942;376943;376944;376945;376946;376947;376948;376949;376950;376951;376952;376953;376954 297352;297353;297354;297355;297356;297357;297358;297359;297360;297361;297362;297363;297364;297365;297366;297367;297368;297369;297370;297371;297372;297373;297374;297375;297376;297377;297378;297379;297380;297381;297382 297358 27 RVLEENQEHYHIVQK Unmodified 1920.9806 0.98060855 1797 P57740 NUP107 Nuclear pore complex protein Nup107 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 30.948 31.334 4 0.015602 32371 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 14.346 6.5217 51162000 0 0 0 0 0 8771800 0 0 8411100 0 0 15040000 0 0 18939000 44967 1797 40295 376955;376956;376957;376958 297383;297384;297385 297384 3 RVLGQLHGGPSSCSATGTNR Unmodified 2054.0076 0.007568354 75 CON__P15636 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 79 5 3 6 7 5 7 6 11 7 9 6 7 29.705 29.961 2;3;4 1.752E-288 31412 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 241.38 227.4 + 43219000000 0 0 0 2240700000 970770000 3101900000 1770600000 2111500000 4428400000 2896600000 5809300000 6384500000 4990100000 3045300000 5469800000 44968 75 40296 376959;376960;376961;376962;376963;376964;376965;376966;376967;376968;376969;376970;376971;376972;376973;376974;376975;376976;376977;376978;376979;376980;376981;376982;376983;376984;376985;376986;376987;376988;376989;376990;376991;376992;376993;376994;376995;376996;376997;376998;376999;377000;377001;377002;377003;377004;377005;377006;377007;377008;377009;377010;377011;377012;377013;377014;377015;377016;377017;377018;377019;377020;377021;377022;377023;377024;377025;377026;377027;377028;377029;377030;377031;377032;377033;377034;377035;377036;377037 297386;297387;297388;297389;297390;297391;297392;297393;297394;297395;297396;297397;297398;297399;297400;297401;297402;297403;297404;297405;297406;297407;297408;297409;297410;297411;297412;297413;297414;297415;297416;297417;297418;297419;297420;297421;297422;297423;297424;297425;297426;297427;297428;297429;297430;297431;297432;297433;297434;297435;297436;297437;297438;297439;297440;297441;297442;297443;297444;297445;297446;297447;297448;297449;297450;297451;297452 297391 59 RVLGQLHGGPSSCSATGTNRSDQYGR Unmodified 2760.311 0.3110206 75 CON__P15636 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 29 2 3 3 2 3 1 2 4 3 3 3 33.881 34.16 3;4;5 3.662E-109 37342 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 161.84 147.94 + 1905800000 0 0 0 18707000 0 167640000 24886000 48640000 262660000 29409000 300420000 403270000 185370000 118350000 346430000 44969 75 40297 377038;377039;377040;377041;377042;377043;377044;377045;377046;377047;377048;377049;377050;377051;377052;377053;377054;377055;377056;377057;377058;377059;377060;377061;377062;377063;377064;377065;377066 297453;297454;297455;297456;297457;297458;297459;297460;297461;297462;297463;297464;297465;297466;297467;297468;297469;297470;297471 297468 16 RVLIAAHGNSLR Unmodified 1305.763 0.76295162 1077 P18669;P15259 PGAM1;PGAM2 Phosphoglycerate mutase 1;Phosphoglycerate mutase 2 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 2 29.769 30.044 2;3 8.4149E-06 31287 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 94.538 83.633 955430000 0 0 0 0 3510000 24618000 20747000 18664000 19276000 9088100 59907000 174460000 35364000 93341000 496450000 44970 1077 40298 377067;377068;377069;377070;377071;377072;377073;377074;377075;377076;377077;377078 297472;297473;297474;297475;297476;297477;297478;297479;297480;297481 297481 9 RVLLGETGK Unmodified 971.57638 0.57637963 1888 P62280 RPS11 40S ribosomal protein S11 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 22.405 22.154 2 7.1895E-07 22060 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 174.92 88.444 3699700000 675690000 0 0 96875000 119850000 147130000 184610000 146590000 172380000 298470000 356420000 447270000 519360000 180020000 355010000 44971 1888 40299 377079;377080;377081;377082;377083;377084;377085;377086;377087;377088;377089;377090;377091 297482;297483;297484;297485;297486;297487;297488;297489;297490;297491;297492;297493 297491 5 RVLLQASQDENFGNTTPR Unmodified 2045.029 0.029015303 1797 P57740 NUP107 Nuclear pore complex protein Nup107 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 55.069 55.275 3 2.9138E-20 62400 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 101.5 96.745 103150000 0 0 0 0 3221800 8852200 6072100 11726000 0 12241000 10473000 11524000 10326000 7299800 21412000 44972 1797 40300 377092;377093;377094;377095;377096;377097;377098;377099;377100;377101 297494;297495;297496;297497;297498;297499;297500;297501;297502;297503;297504;297505 297504 11 RVLPPNWK Unmodified 1008.5869 0.58688473 1887 P62277 RPS13 40S ribosomal protein S13 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 40.751 41.086 2 0.036415 46137 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 110.63 62.46 160450000 0 0 0 0 0 12379000 11244000 5557000 0 14306000 18371000 31724000 21016000 15935000 29915000 44973 1887 40301 377102;377103;377104;377105;377106;377107;377108;377109;377110 297506;297507;297508;297509;297510 297509 4 RVLQALEGLK Unmodified 1125.687 0.68699271 1401 P39019 RPS19 40S ribosomal protein S19 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 57.068 57.658 2 0.0072854 64861 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 117.53 55.847 45644000 0 0 0 0 0 0 0 0 0 0 0 17843000 0 0 27801000 44974 1401 40302 377111;377112 297511 297511 1 RVLQQFADNDVSR Unmodified 1546.7852 0.7852032 1667 P51659 HSD17B4 Peroxisomal multifunctional enzyme type 2;(3R)-hydroxyacyl-CoA dehydrogenase;Enoyl-CoA hydratase 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 42.398 42.548 3 0.0045752 47688 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 40.941 28.559 38146000 0 0 0 3715100 2645300 3326800 2989400 3213400 1756700 2835000 5176200 7752400 0 0 4736000 44975 1667 40303 377113;377114;377115;377116;377117;377118;377119;377120;377121;377122 297512;297513;297514;297515;297516;297517;297518 297512 7 RVLSPEELEDRQK Unmodified 1597.8424 0.84238373 3184 Q86WJ1 CHD1L Chromodomain-helicase-DNA-binding protein 1-like yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 39.373 38.898 3 9.2691E-10 57014 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 118.37 104.95 64643000 17173000 0 0 0 0 6108500 0 3105600 4802200 4296700 5714700 5739600 5613600 4197200 7891200 44976 3184 40304 377123;377124;377125;377126;377127;377128;377129;377130;377131;377132 297519;297520;297521;297522 297520 4 RVMGLVPAK Unmodified 969.57936 0.57935651 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 37.167 36.758 2 0.016396 40536 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 102.71 70.243 670210000 35886000 0 0 23398000 20284000 74900000 29518000 33471000 19085000 65993000 70564000 51711000 38550000 59035000 147810000 44977 1565 40305 377133;377134;377135;377136;377137;377138;377139;377140;377141;377142;377143;377144;377145 297523;297524;297525;297526;297527 297523 0 RVMGLVPAK Oxidation (M) 985.57427 0.57427114 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 1 1 By MS/MS 2 0 1 1 31.106 25.387 2 0.0146 35685 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 91.906 71.351 108010000 108010000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44978 1565 40305 377146 297528 297528 2502 0 RVMPDGK Unmodified 801.41671 0.41670786 4625 Q9NSD9 FARSB Phenylalanine--tRNA ligase beta subunit yes yes 0 0 1 By MS/MS 2 0 1 1 10.045 6.2704 2 0.033719 10321 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 127.12 73.408 544070000 544070000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44979 4625 40306 377147 297529 297529 0 RVNAIEEVNNNVK Unmodified 1497.79 0.78995423 4950 Q9UJY5 GGA1 ADP-ribosylation factor-binding protein GGA1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.36 2.17 2 23 1 1 1 2 2 2 2 2 2 2 2 2 2 2 37.064 36.836 2;3 0.00061892 40598 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 61.042 55.726 379960000 202640000 0 14663000 6625800 8693600 17430000 13533000 10071000 9438600 14408000 13069000 17796000 20049000 13106000 18444000 44980 4950 40307 377148;377149;377150;377151;377152;377153;377154;377155;377156;377157;377158;377159;377160;377161;377162;377163;377164;377165;377166;377167;377168;377169;377170;377171;377172 297530;297531;297532;297533;297534;297535;297536;297537;297538;297539;297540;297541;297542;297543;297544;297545 297542 16 RVNAIEHVIIPR Unmodified 1415.8361 0.83611656 5237 Q9Y5K8 ATP6V1D V-type proton ATPase subunit D yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 55.052 55.67 3 0.00043253 62335 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.261 39.321 10567000 0 0 0 0 0 0 0 0 0 0 0 1423400 0 0 9143200 44981 5237 40308 377173;377174 297546 297546 1 RVNDSDDLIMTENEVGK Unmodified 1933.9051 0.90511992 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 55.767 55.964 3 0.00079579 63573 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 28.472 24.204 29138000 0 0 0 2950300 0 2325200 0 3450000 0 0 3002300 5560000 0 2146600 9703300 44982 4139 40309 377175;377176;377177;377178;377179;377180;377181 297547;297548;297549;297550;297551;297552;297553 297550 7 RVNEVIVGNDQLMEI Oxidation (M) 1743.8825 0.88253399 4593 Q9NR50 EIF2B3 Translation initiation factor eIF-2B subunit gamma yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 76.507 75.634 2 1.9599E-09 93799 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.24 89.973 172440000 0 71753000 13912000 4713800 5320600 13969000 7866000 0 0 12556000 11106000 9508600 12148000 0 9584600 44983 4593 40310 377182;377183;377184;377185;377186;377187;377188;377189;377190;377191;377192;377193;377194;377195;377196;377197 297554;297555;297556;297557;297558;297559;297560;297561;297562;297563;297564;297565;297566;297567 297557 5998 13 RVNEVIVGNDQLMEI Unmodified 1727.8876 0.88761936 4593 Q9NR50 EIF2B3 Translation initiation factor eIF-2B subunit gamma yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 86.229 82.73 2 0.0018562 103015 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.466 59.56 25854000 0 23447000 2406600 0 0 0 0 0 0 0 0 0 0 0 0 44984 4593 40310 377198;377199;377200 297568;297569;297570 297568 3 RVNLAIWDTAGQER Unmodified 1627.8431 0.84305243 4984 Q9UL25 RAB21 Ras-related protein Rab-21 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 70.446 70.649 3 0.0027824 81314 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 28.11 22.567 23033000 0 0 0 0 0 2940700 0 2656200 3576100 2815100 0 2538500 0 0 8506800 44985 4984 40311 377201;377202;377203;377204;377205;377206 297571;297572;297573 297573 3 RVNSASSSNPPAEVDPDTILK Unmodified 2196.1022 0.10223983 4243 Q9BY77 POLDIP3 Polymerase delta-interacting protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.316 64.407 3 1.6385E-47 72807 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 111.49 103.59 376830000 0 0 0 15535000 18915000 31423000 26557000 23469000 29274000 37886000 39614000 40737000 33460000 25160000 54800000 44986 4243 40312 377207;377208;377209;377210;377211;377212;377213;377214;377215;377216;377217;377218 297574;297575;297576;297577;297578;297579;297580;297581;297582;297583;297584;297585;297586;297587;297588 297579 15 RVPCAYDK Unmodified 1007.4859 0.48585006 1500 P46109 CRKL Crk-like protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 15.337 12.084 2 0.008893 17868 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 122.74 65.64 378350000 331770000 18268000 28311000 0 0 0 0 0 0 0 0 0 0 0 0 44987 1500 40313 377219;377220;377221 297589 297589 1 RVPDHHPC Unmodified 1016.461 0.46103229 1980 P78371 CCT2 T-complex protein 1 subunit beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 6.5394 3.5752 2 0.0086556 6409 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 125.08 118.7 896090000 835300000 17466000 43327000 0 0 0 0 0 0 0 0 0 0 0 0 44988 1980 40314 377222;377223;377224 297590;297591 297590 2 RVPEEASTNRR Unmodified 1313.68 0.68000985 2657 Q2TAM9 TUSC1 Tumor suppressor candidate gene 1 protein yes yes 0 0 2 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.5821 6.7063 3 0.015302 4389 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 70.488 48.014 111510000 0 0 0 6069200 7792500 6290100 7283800 7247700 6644900 10698000 13132000 12026000 10749000 9834400 13741000 44989 2657 40315 377225;377226;377227;377228;377229;377230;377231;377232;377233;377234;377235;377236 297592;297593;297594;297595;297596 297593 3 RVPFSLLR Unmodified 986.60253 0.6025348 786 P04792 HSPB1 Heat shock protein beta-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.703 67.785 2 0.007982 77951 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 127.02 35.121 1873400000 0 0 0 44601000 17165000 181780000 78468000 89077000 152970000 107570000 84432000 218290000 112630000 80436000 705970000 44990 786 40316 377237;377238;377239;377240;377241;377242;377243;377244;377245;377246;377247;377248 297597;297598;297599;297600;297601;297602;297603;297604 297597 0 RVPLTPQEK Unmodified 1066.6135 0.61349341 3126 Q86SF2 GALNT7 N-acetylgalactosaminyltransferase 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 21.53 21.738 2 0.037069 22849 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 85.67 49.275 79093000 0 0 0 3540600 4420700 4569600 6173000 0 5399800 11303000 9858400 8261500 8190800 9691900 7683400 44991 3126 40317 377249;377250;377251;377252;377253;377254;377255;377256;377257;377258;377259 297605;297606 297605 1 RVPSNASWEQAMK Oxidation (M) 1518.7249 0.72491113 494 O75400 PRPF40A Pre-mRNA-processing factor 40 homolog A yes yes 0 1 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 29.857 30.188 3 5.1875E-05 32574 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 83.243 77.759 93286000 0 0 0 0 0 10629000 0 0 0 29654000 20071000 32932000 0 0 0 44992 494 40318 377260;377261;377262;377263;377264;377265 297607;297608;297609;297610;297611;297612 297607 644 6 RVPSNASWEQAMK Unmodified 1502.73 0.72999651 494 O75400 PRPF40A Pre-mRNA-processing factor 40 homolog A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.24 2.35 2 19 2 2 2 2 2 1 1 1 2 2 2 2 46.827 46.156 2;3 2.8149E-07 50387 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 105.2 79.987 505370000 62615000 0 0 5357900 5167100 0 9033100 49686000 10427000 15066000 16761000 77005000 66947000 62568000 124740000 44993 494 40318 377266;377267;377268;377269;377270;377271;377272;377273;377274;377275;377276;377277;377278;377279;377280;377281;377282;377283;377284;377285;377286 297613;297614;297615;297616;297617;297618;297619;297620;297621;297622;297623;297624;297625;297626;297627;297628;297629 297616 12 RVPTAPAATSK Unmodified 1097.6193 0.61930707 1003 P14635 CCNB1 G2/mitotic-specific cyclin-B1 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.248 14.411 2 0.0022535 13719 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 92.611 45.037 85401000 0 0 0 7376500 4160700 9180900 4161700 4635200 4331400 9160700 7152400 9407900 7048800 6484600 12301000 44994 1003 40319 377287;377288;377289;377290;377291;377292;377293;377294;377295;377296;377297;377298 297630;297631;297632;297633;297634;297635 297631 6 RVQDLSAGGQGSLTDSGPER Unmodified 2028.9825 0.98245904 1409 P40222 TXLNA Alpha-taxilin yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 40.703 41.039 3 1.0175E-21 44715 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 97.457 79.829 33656000 0 0 0 0 0 4419800 3387100 0 3045000 0 0 6376400 0 4237500 12190000 44995 1409 40320 377299;377300;377301;377302;377303;377304 297636;297637;297638;297639;297640;297641 297637 6 RVQFGVLSPDELK Unmodified 1486.8144 0.81437807 1179 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 74.51 74.748 3 0.0027616 85570 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.457 24.615 15168000 0 0 0 0 0 0 0 0 0 0 0 0 0 5067700 10100000 44996 1179 40321 377305;377306 297642;297643 297642 2 RVQGTPVASK Unmodified 1041.5931 0.59309232 5040 Q9UNQ2 DIMT1 Probable dimethyladenosine transferase yes yes 0 0 1 By MS/MS 2 0 1 1 11.249 7.3756 2 0.037832 11722 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.173 29.192 38488000 38488000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44997 5040 40322 377307 297644 297644 1 RVQQEIDSDESPVAR Unmodified 1727.8438 0.84384029 2970 Q6T4R5 NHS Nance-Horan syndrome protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 32.581 32.504 3 0.00042235 35714 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 41.695 37.635 21676000 0 0 0 3679000 2802300 3173700 3700500 5682100 2638800 0 0 0 0 0 0 44998 2970 40323 377308;377309;377310;377311;377312;377313;377314;377315;377316;377317 297645;297646;297647;297648;297649;297650;297651;297652;297653;297654 297645 10 RVQSCPDPAVYGVVQSGDHIGR Unmodified 2396.1655 0.16552556 4287 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O yes yes 0 0 1 By MS/MS 10 0 1 1 60.001 60.193 4 0.037364 67925 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 14.234 10.996 6117600 0 0 0 0 0 0 0 0 0 0 0 0 0 6117600 0 44999 4287 40324 377318 297655 297655 1 RVQVDVK Unmodified 842.4974 0.49740102 2262 Q13263 TRIM28 Transcription intermediary factor 1-beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 17.497 14.116 2 0.017676 17343 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 134.66 34.744 1609800000 1317900000 92798000 199140000 0 0 0 0 0 0 0 0 0 0 0 0 45000 2262 40325 377319;377320;377321 297656 297656 0 RVSALNSVHCEHVEDEGESR Unmodified 2309.0455 0.045470003 2231 Q13085 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes yes 0 0 1 By MS/MS By matching 10 0 2 1 1 30.1 30.447 4 0.024772 33635 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 17.43 13.711 12587000 0 0 0 0 0 6184200 0 0 0 0 0 0 0 0 6402400 45001 2231 40326 377322;377323 297657 297657 1 RVSDSAIIHTSMGDIHTK Oxidation (M) 1982.9844 0.9843733 3762 Q96BP3 PPWD1 Peptidylprolyl isomerase domain and WD repeat-containing protein 1 yes yes 0 1 1 By MS/MS 2 0 1 1 44.256 37.39 4 0.0014109 51506 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.432 29.387 17098000 17098000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45002 3762 40327 377324 297658 297658 5327 1 RVSELEHENAQLR Unmodified 1579.8067 0.80666693 2741 Q5JTW2 CEP78 Centrosomal protein of 78 kDa yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 27.196 27.467 3 0.012302 29578 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 50.222 42.311 27998000 0 0 0 0 0 6841900 0 3725700 0 5570800 0 0 6650400 0 5209000 45003 2741 40328 377325;377326;377327;377328;377329;377330;377331 297659;297660;297661;297662;297663 297661 3 RVSGHYVTSAAAK Unmodified 1345.7102 0.71024735 2708 Q53SF7 COBLL1 Cordon-bleu protein-like 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.696 12.844 3 0.0005242 10699 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.724 47.858 78321000 0 0 0 5026500 4771300 6878500 6888200 5043100 4842200 7234300 4936600 9819900 7077100 4264600 11539000 45004 2708 40329 377332;377333;377334;377335;377336;377337;377338;377339;377340;377341;377342;377343 297664;297665;297666;297667;297668;297669;297670;297671 297666 7 RVSLEPHQGPGTPESK Unmodified 1717.8747 0.87474649 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 2 1 26.288 25.967 2;3 4.141E-21 25718 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.773 71.719 165720000 11429000 0 0 7601800 8854500 20622000 15461000 12910000 11714000 14466000 9937000 0 10185000 13059000 29477000 45005 2459 40330 377344;377345;377346;377347;377348;377349;377350;377351;377352;377353;377354;377355;377356 297672;297673;297674;297675;297676;297677;297678;297679;297680;297681;297682;297683 297675 12 RVSLVGADDLRK Unmodified 1327.7572 0.75719754 2381 Q14160 SCRIB Protein scribble homolog yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 39.08 39.208 3 0.012338 43654 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 64.313 41.396 287240000 0 0 0 14305000 7607300 21759000 22102000 24356000 28405000 22602000 30883000 0 31097000 31810000 52310000 45006 2381 40331 377357;377358;377359;377360;377361;377362;377363;377364;377365;377366;377367 297684 297684 0 RVTAYTVDVTGR Unmodified 1336.7099 0.709913 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 41.519 41.739 3 0.0038124 45522 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 35.118 24.212 14723000 0 0 0 0 0 0 0 5547100 0 0 0 0 0 9175800 0 45007 2172 40332 377368;377369 297685;297686 297686 2 RVTELEQEK Unmodified 1130.5932 0.5931519 5204 Q9Y4I1 MYO5A Unconventional myosin-Va yes yes 0 0 1 By MS/MS By matching By matching By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 14.228 14.522 2 0.042281 12566 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.548 18.068 18094000 0 0 0 0 0 0 2079200 0 0 2308400 4123200 4253700 0 1402000 3927400 45008 5204 40333 377370;377371;377372;377373;377374;377375 297687 297687 1 RVTHNPMIQK Unmodified 1222.6605 0.66046038 293 O15541 RNF113A RING finger protein 113A yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 13.645 13.802 3 0.0076264 12979 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 37.968 28.281 51869000 0 0 0 6474500 0 4660200 0 3026000 0 7513600 13209000 0 8223800 8761100 0 45009 293 40334 377376;377377;377378;377379;377380;377381;377382 297688;297689;297690 297688 3 RVTVLEQNGEK Unmodified 1271.6834 0.68336389 3554 Q8WUX9 CHMP7 Charged multivesicular body protein 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 21.906 21.094 2 0.00051512 20016 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 113.67 53.081 70017000 17794000 0 0 0 3636000 6013900 0 11466000 2947500 0 0 0 0 0 28160000 45010 3554 40335 377383;377384;377385;377386;377387;377388 297691;297692 297691 1 RVVALSMSPVDDTFISGSLDK Oxidation (M) 2252.1358 0.13584814 2984 Q6UXN9 WDR82 WD repeat-containing protein 82 yes yes 0 1 1 By MS/MS 2 0 1 1 85.87 77.74 3 3.3142E-30 101363 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 115.85 103.04 33760000 33760000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45011 2984 40336 377389 297693;297694 297693 4600 2 RVVALSMSPVDDTFISGSLDK Unmodified 2236.1409 0.14093352 2984 Q6UXN9 WDR82 WD repeat-containing protein 82 yes yes 0 0 1 By MS/MS 2 0 1 1 91.446 83.315 3 2.7957E-07 108130 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.145 62.584 11983000 11983000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45012 2984 40336 377390 297695;297696 297696 2 RVVDESDETENQEEK Unmodified 1805.7915 0.79152995 535 O75717 WDHD1 WD repeat and HMG-box DNA-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.26 3.26 5 1 21 2 3 1 1 2 1 2 1 2 2 2 2 2 2 2 13.354 12.725 2;3 1.9869E-23 11856 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 120.92 111.39 232780000 34085000 23461000 1809900 10536000 12544000 12689000 14733000 7374300 15207000 19044000 11855000 21928000 15302000 10956000 21260000 45013 535 40337 377391;377392;377393;377394;377395;377396;377397;377398;377399;377400;377401;377402;377403;377404;377405;377406;377407;377408;377409;377410;377411;377412;377413;377414;377415;377416;377417 297697;297698;297699;297700;297701;297702;297703;297704;297705;297706;297707;297708;297709;297710;297711;297712;297713;297714;297715;297716;297717 297715 21 RVVEDTTAIDVQVGLLYEEGVRK Unmodified 2588.381 0.38098087 4924 Q9UID3 VPS51 Vacuolar protein sorting-associated protein 51 homolog yes yes 0 0 2 By MS/MS 3 0 1 1 87.276 83.687 4 0.037333 85203 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 19.975 17.213 1426700 1426700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45014 4924 40338 377418 297718 297718 1 RVVHFAEPGAGTK Unmodified 1367.731 0.73098279 3639 Q92614 MYO18A Unconventional myosin-XVIIIa yes yes 0 0 1 By matching By MS/MS By matching By matching By matching By matching By matching 10 0 7 1 1 1 1 1 1 1 27.416 27.566 3 0.0065545 29693 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 32.439 22.674 23519000 0 0 0 3029300 0 0 4214700 2543600 4045600 2007500 3184700 0 4493500 0 0 45015 3639 40339 377419;377420;377421;377422;377423;377424;377425 297719 297719 1 RVVIVDPETNK Unmodified 1268.7089 0.70885036 1029 P15924 DSP Desmoplakin yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 36.154 36.338 3 0.0023901 40123 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 42.629 29.492 31285000 0 0 0 6175500 0 2178500 2280000 11804000 0 0 3170800 0 3216000 0 2460400 45016 1029 40340 377426;377427;377428;377429;377430;377431;377432 297720;297721;297722 297720 3 RVVLSGHPFK Unmodified 1138.6611 0.66111231 2654 Q2NL82 TSR1 Pre-rRNA-processing protein TSR1 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 33.317 33.623 3 0.012182 36199 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 33.057 25.132 75224000 0 0 0 0 0 9591600 5644900 6323300 7251500 4095300 4822900 6698600 13845000 4723200 12229000 45017 2654 40341 377433;377434;377435;377436;377437;377438;377439;377440;377441;377442 297723;297724;297725;297726;297727;297728 297725 6 RVVRDPQGIR Unmodified 1194.6945 0.6945377 1855 P61626 LYZ Lysozyme C yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 2 1 1 1 1 1 1 1 1 1 14.835 14.983 3 0.0090293 14916 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 99.568 74.73 417830000 0 0 0 24020000 12827000 16241000 53956000 25546000 11871000 21730000 50758000 79350000 69746000 18763000 33022000 45018 1855 40342 377443;377444;377445;377446;377447;377448;377449;377450;377451;377452;377453;377454;377455 297729;297730;297731;297732;297733;297734;297735;297736;297737 297729 3 RVVVYGGEGDNLK Unmodified 1404.7361 0.73612775 2774 Q5T447 HECTD3 E3 ubiquitin-protein ligase HECTD3 yes yes 0 0 1 By MS/MS 2 0 1 1 44.932 38.067 2 6.6121E-29 52173 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 160.18 113.73 17636000 17636000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45019 2774 40343 377456 297738 297738 1 RVVYVDGK Unmodified 934.52362 0.52361577 4677 Q9NVQ4 FAIM Fas apoptotic inhibitory molecule 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 16.766 16.035 2 0.039567 14608 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 113.94 71.028 58322000 20173000 0 0 0 0 3931500 0 0 0 0 0 8538000 0 5403500 20277000 45020 4677 40344 377457;377458;377459;377460;377461 297739;297740 297739 2 RVYATILNAGTNTDGFK Unmodified 1839.9479 0.94791144 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 13 2 1 1 2 2 1 1 1 2 67.275 67.499 2;3 1.1095E-30 76453 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 121.99 97.999 291420000 0 0 0 0 0 65724000 0 10738000 11363000 31757000 26636000 8743200 15108000 19526000 101820000 45021 1565 40345 377462;377463;377464;377465;377466;377467;377468;377469;377470;377471;377472;377473;377474 297741;297742;297743;297744;297745;297746;297747;297748;297749 297744 9 RVYDQVGTQEFEDVSYESTLK Unmodified 2492.1707 0.17071332 1704 P52888 THOP1 Thimet oligopeptidase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 78.487 73.923 3 2.7869E-18 92830 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.3 67.848 124820000 63054000 39850000 21914000 0 0 0 0 0 0 0 0 0 0 0 0 45022 1704 40346 377475;377476;377477;377478;377479 297750;297751;297752;297753;297754 297750 5 RVYEEFTK Unmodified 1070.5397 0.53965977 3871 Q96HW7 INTS4 Integrator complex subunit 4 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 33.923 29.113 2 0.041833 41269 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.9 38.477 41843000 40203000 0 1639300 0 0 0 0 0 0 0 0 0 0 0 0 45023 3871 40347 377480;377481 297755 297755 0 RVYSLFLDESR Unmodified 1383.7147 0.71466402 5077 Q9Y230 RUVBL2 RuvB-like 2 yes yes 0 0 1 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 68.836 68.896 3 0.027708 78118 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 23.676 15.544 84723000 0 0 0 1281800 1909500 12522000 3784600 4176800 9116700 6765400 0 11490000 5785200 6174500 21716000 45024 5077 40348 377482;377483;377484;377485;377486;377487;377488;377489;377490;377491;377492 297756;297757;297758;297759 297757 4 RWIGSETDLEPPVVK Unmodified 1724.9097 0.90973501 232 O14974 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes yes 0 0 1 By MS/MS By matching By matching By MS/MS 8 3.46 1 3 1 1 1 1 74.769 72.914 3 0.00026162 94434 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.038 56.654 60021000 44305000 0 0 0 0 0 0 3557200 0 0 0 0 0 3458500 8700700 45025 232 40349 377493;377494;377495;377496 297760;297761 297761 2 RWIYEDVER Unmodified 1264.62 0.62003536 376 O43852 CALU Calumenin yes yes 0 0 1 By matching By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 2 1 2 2 52.062 52.446 2;3 0.023285 58658 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 31.286 24.398 83555000 0 0 0 0 0 2406600 1159500 0 1139900 0 3404500 16988000 1835400 9898800 46722000 45026 376 40350 377497;377498;377499;377500;377501;377502;377503;377504;377505;377506;377507 297762;297763;297764;297765 297764 3 RWLSSQPSFK Unmodified 1234.6459 0.64585618 412 O60563 CCNT1 Cyclin-T1 yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 48.659 49.239 3 0.0035228 54500 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.958 36.229 13799000 0 0 0 0 0 0 0 0 0 0 5711300 0 0 0 8088100 45027 412 40351 377508;377509 297766 297766 1 RWNSLPSENHK Unmodified 1366.6742 0.67419619 2577 Q15785 TOMM34 Mitochondrial import receptor subunit TOM34 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.392 24.593 3 8.1386E-05 24548 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.596 79.896 283570000 0 0 0 8750000 7267100 21247000 17797000 14451000 21023000 18586000 20906000 36736000 31900000 19988000 64918000 45028 2577 40352 377510;377511;377512;377513;377514;377515;377516;377517;377518;377519;377520;377521 297767;297768;297769;297770;297771;297772;297773;297774;297775;297776;297777;297778;297779;297780;297781;297782 297771 14 RYAVFNEDGSLAELK Unmodified 1710.8577 0.85769944 2142 Q07864 POLE DNA polymerase epsilon catalytic subunit A yes yes 0 0 1 By MS/MS 2 0 1 1 79.68 71.549 3 0.008363 94043 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 32.152 21.667 11860000 11860000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45029 2142 40353 377522 297783 297783 0 RYDALSEHNLK Unmodified 1344.6786 0.67861287 4979 Q9UKY1 ZHX1 Zinc fingers and homeoboxes protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 28.541 28.614 3 0.0015784 30968 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 62.089 41.885 106120000 0 0 0 0 8393100 17263000 15514000 0 16607000 0 0 0 26121000 22226000 0 45030 4979 40354 377523;377524;377525;377526;377527;377528 297784;297785;297786;297787;297788 297784 3 RYDDPEVQK Unmodified 1148.5462 0.54620171 1399 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 0 1 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 2 1 1 1 1 1 1 1 1 14.11 14.258 2 7.8177E-05 13809 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 133.13 77.458 280570000 0 0 0 12897000 11733000 13989000 13837000 11773000 9976200 24450000 32099000 35274000 25751000 24551000 64235000 45031 1399 40355 377529;377530;377531;377532;377533;377534;377535;377536;377537;377538;377539;377540;377541 297789;297790;297791;297792;297793;297794;297795;297796 297794 0 RYDFQNPSR Unmodified 1181.5578 0.55776945 3475 Q8TAQ2 SMARCC2 SWI/SNF complex subunit SMARCC2 yes yes 0 0 1 By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 26.601 26.757 3 0.029017 27638 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 31.185 24.922 44299000 0 0 0 2342500 3291800 4411600 4504300 4092600 3301300 4906200 2784900 0 5117500 5268900 4277500 45032 3475 40356 377542;377543;377544;377545;377546;377547;377548;377549;377550;377551;377552 297797 297797 1 RYDGSQQALDLK Unmodified 1392.6997 0.69974224 4861 Q9UBU9 NXF1 Nuclear RNA export factor 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 9.2 2.4 2 18 1 1 1 2 2 1 1 2 2 2 1 2 1 1 37.041 36.718 2;3 0.0019997 40098 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 45.357 28.885 118430000 0 16385000 3804300 5187500 8500700 10992000 6801500 6883300 9995100 10515000 10823000 7774200 8910200 5326000 6536300 45033 4861 40357 377553;377554;377555;377556;377557;377558;377559;377560;377561;377562;377563;377564;377565;377566;377567;377568;377569;377570;377571;377572 297798;297799;297800;297801;297802;297803;297804;297805;297806;297807;297808;297809 297798 9 RYDQDLCYTDILFTEQERGVGIK Unmodified 2818.3596 0.3595935 2481 Q15029 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 0 0 2 By MS/MS 2 0 1 1 90.139 82.009 4 0.00017469 106500 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.077 44.878 12500000 12500000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45034 2481 40358 377573 297810 297810 1 RYDSNSGGEREIQR Unmodified 1665.7819 0.78190874 1875 P62191 PSMC1 26S protease regulatory subunit 4 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 11.767 11.913 3 6.1667E-13 10342 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 114.64 93.803 397080000 0 0 0 24470000 19984000 30568000 15038000 16838000 9851500 52750000 26484000 120600000 18990000 18869000 42642000 45035 1875 40359 377574;377575;377576;377577;377578;377579;377580;377581;377582;377583;377584;377585 297811;297812;297813;297814;297815;297816;297817;297818;297819 297818 6 RYEALGEIITK Unmodified 1291.7136 0.71360139 3543 Q8WUF8 FAM172A Protein FAM172A yes yes 0 0 1 By MS/MS 2 0 1 1 71.046 62.779 3 0.0077672 83498 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.205 38.993 9431900 9431900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45036 3543 40360 377586 297820 297820 1 RYEEELEINDFPQTAR Unmodified 2008.949 0.94903365 3041 Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.06 2.58 2 15 1 1 1 1 2 1 2 2 1 1 1 1 1 1 70.706 70.128 3 4.8064E-08 80069 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 87.388 77.982 214680000 12763000 0 7092100 3126900 5638200 22723000 8381900 15787000 19721000 17170000 16419000 22386000 10897000 12563000 40015000 45037 3041 40361 377587;377588;377589;377590;377591;377592;377593;377594;377595;377596;377597;377598;377599;377600;377601;377602;377603 297821;297822;297823;297824;297825;297826;297827;297828;297829;297830;297831;297832;297833;297834;297835;297836;297837;297838;297839;297840;297841;297842;297843;297844;297845;297846 297830 25 RYELPAPSSGQK Unmodified 1331.6834 0.68336389 560 O75934 BCAS2 Pre-mRNA-splicing factor SPF27 yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 36.616 35.101 2;3 8.791E-06 49012 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.382 73.005 172680000 141470000 0 18071000 2201400 1333900 0 2703100 0 2636900 0 0 0 0 4258400 0 45038 560 40362 377604;377605;377606;377607;377608;377609;377610 297847;297848;297849;297850 297847 4 RYFDENAAEDFEK Unmodified 1632.7056 0.70561548 5198 Q9Y4E8 USP15 Ubiquitin carboxyl-terminal hydrolase 15 yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.71 3.61 4 10 2 2 1 1 1 1 2 1 1 2 57.176 55.713 2;3 0.0031569 62501 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.69 38.889 83384000 28936000 0 15880000 0 0 0 1486200 2237500 0 3193400 4161600 7472000 3890600 3113000 13013000 45039 5198 40363 377611;377612;377613;377614;377615;377616;377617;377618;377619;377620;377621;377622;377623;377624 297851;297852;297853;297854;297855;297856 297852 4 RYFECQAK Unmodified 1100.5073 0.50731378 4006 Q99426 TBCB Tubulin-folding cofactor B yes yes 0 0 1 By MS/MS 2 0 1 1 22.926 18.03 2 0.043089 25923 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.25 57.483 81908000 81908000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45040 4006 40364 377625 297857 297857 1 RYFSEGDK Unmodified 1000.4614 0.46140945 1114 P20839 IMPDH1 Inosine-5'-monophosphate dehydrogenase 1 yes yes 0 0 1 By MS/MS By matching 2 0 2 1 1 18.033 14.541 2 0.018233 21466 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 144.9 117.38 233720000 229260000 0 4452600 0 0 0 0 0 0 0 0 0 0 0 0 45041 1114 40365 377626;377627 297858 297858 1 RYGEDSEQFRDASK Unmodified 1686.7598 0.75977631 539 O75787 ATP6AP2 Renin receptor yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 20.373 20.76 3 0.011558 20833 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 58.814 25.129 53574000 0 0 0 0 0 0 6441700 0 0 0 0 26118000 0 4977800 16037000 45042 539 40366 377628;377629;377630;377631 297859 297859 1 RYIFDNVAK Unmodified 1124.5978 0.59784335 2515 Q15293 RCN1 Reticulocalbin-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 48.042 47.564 2 3.1487E-05 52693 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 135.83 106.45 1086300000 211500000 0 0 24207000 23331000 27677000 32130000 35014000 27356000 46541000 119600000 144160000 50661000 111840000 232250000 45043 2515 40367 377632;377633;377634;377635;377636;377637;377638;377639;377640;377641;377642;377643;377644 297860;297861;297862;297863;297864;297865;297866;297867 297867 3 RYLDGLTAER Unmodified 1192.62 0.62003536 79 CON__P35908v2;P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 46 6 4 4 3 5 4 3 3 3 4 3 4 42.552 42.688 2;3 4.3386E-17 49340 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 138.65 125.45 + 22971000000 0 0 0 2790700000 854520000 1837900000 1036700000 2711400000 1440100000 1601300000 1912800000 2931200000 3200300000 1353500000 1300900000 45044 79 40368 377645;377646;377647;377648;377649;377650;377651;377652;377653;377654;377655;377656;377657;377658;377659;377660;377661;377662;377663;377664;377665;377666;377667;377668;377669;377670;377671;377672;377673;377674;377675;377676;377677;377678;377679;377680;377681;377682;377683;377684;377685;377686;377687;377688;377689;377690 297868;297869;297870;297871;297872;297873;297874;297875;297876;297877;297878;297879;297880;297881;297882;297883;297884;297885;297886;297887;297888;297889;297890;297891;297892;297893;297894;297895;297896;297897;297898;297899;297900;297901;297902;297903;297904;297905;297906;297907;297908;297909;297910;297911 297903 40 RYLEGTSCIAGVLVPAK Unmodified 1832.9819 0.9818541 1802 P58107 EPPK1 Epiplakin yes no 0 0 1 By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 76.319 76.478 3 0.001522 88276 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 40.798 21.475 29866000 0 0 0 0 0 0 1173100 0 7297200 0 3952300 12268000 2002300 3173300 0 45045 1802 40369 377691;377692;377693;377694;377695;377696;377697 297912;297913;297914;297915 297915 4 RYLQAASNNSR Unmodified 1278.6429 0.64289606 5074 Q9UQR1 ZNF148 Zinc finger protein 148 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 11.593 11.741 3 7.8461E-05 9840 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 105.83 89.199 173090000 0 0 0 12187000 11102000 12744000 12112000 12668000 9479300 20132000 6086500 23102000 16177000 16494000 20808000 45046 5074 40370 377698;377699;377700;377701;377702;377703;377704;377705;377706;377707;377708;377709 297916;297917;297918;297919;297920;297921;297922;297923;297924;297925;297926;297927;297928;297929;297930;297931 297920 15 RYLVLDCVPEER Unmodified 1547.7766 0.77661235 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 1 2 2 2 2 2 2 2 2 2 2 65.272 65.423 2;3 0.00023598 74931 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 114.86 61.106 601170000 0 0 0 13527000 13357000 42531000 32911000 39397000 44988000 49487000 48813000 85473000 57076000 58420000 115190000 45047 213 40371 377710;377711;377712;377713;377714;377715;377716;377717;377718;377719;377720;377721;377722;377723;377724;377725;377726;377727;377728;377729;377730;377731 297932;297933;297934;297935;297936;297937;297938;297939;297940;297941;297942;297943;297944;297945;297946 297939 5 RYNEDLELEDAIHTAILTLK Unmodified 2356.2274 0.22744034 1194 P25787 PSMA2 Proteasome subunit alpha type-2 yes yes 0 0 1 By MS/MS By MS/MS 2.4 0.8 1 1 3 3 2 100.39 97.794 3 3.5336E-72 117150 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 143.95 131.82 322520000 300890000 21637000 0 0 0 0 0 0 0 0 0 0 0 0 0 45048 1194 40372 377732;377733;377734;377735;377736 297947;297948;297949;297950;297951;297952 297952 6 RYNVLGAETVLNQMR Oxidation (M) 1778.9098 0.90975179 2645 Q1KMD3 HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 66.122 66.296 3 0.00030767 75842 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 57.288 43.259 113760000 0 0 0 0 0 26069000 6750800 9834200 0 20694000 0 35452000 0 14963000 0 45049 2645 40373 377737;377738;377739;377740;377741;377742 297953;297954;297955;297956 297955 4305 4 RYNVLGAETVLNQMR Unmodified 1762.9148 0.91483717 2645 Q1KMD3 HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes yes 0 0 1 By MS/MS 10 0 1 1 77.447 77.712 3 0.0001954 89364 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.128 50.028 13911000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13911000 45050 2645 40373 377743 297957 297957 1 RYNVPNSAIYK Unmodified 1323.6935 0.69353465 3143 Q86U86 PBRM1 Protein polybromo-1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 41.689 41.205 2 0.012267 44793 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.325 22.907 48719000 3411100 0 0 0 0 3492600 2925800 0 2171600 4418300 4335300 4371600 7580800 5098900 10914000 45051 3143 40374 377744;377745;377746;377747;377748;377749;377750;377751;377752;377753 297958;297959;297960 297959 3 RYPEEFALRDQEK Unmodified 1679.8267 0.82673367 433 O60825 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 2 1 1 1 1 1 44.151 44.324 3 8.1475E-189 48672 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 193.51 161.59 592320000 0 0 0 21403000 14613000 97534000 25067000 31227000 61418000 34148000 39801000 66569000 50632000 34331000 115580000 45052 433 40375 377754;377755;377756;377757;377758;377759;377760;377761;377762;377763;377764;377765;377766 297961;297962;297963;297964;297965;297966;297967;297968;297969;297970;297971;297972;297973;297974 297973 13 RYPSSISSSPQK Unmodified 1335.6783 0.67827852 2380 Q14157 UBAP2L Ubiquitin-associated protein 2-like yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 20.115 20.316 2;3 1.0902E-11 21093 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 136.5 102.76 777200000 0 0 0 34045000 34065000 43850000 53379000 45117000 73379000 90951000 86048000 79898000 60317000 84254000 91900000 45053 2380 40376 377767;377768;377769;377770;377771;377772;377773;377774;377775;377776;377777;377778;377779;377780;377781;377782;377783;377784;377785;377786;377787;377788;377789;377790 297975;297976;297977;297978;297979;297980;297981;297982;297983;297984;297985;297986;297987;297988;297989;297990;297991;297992;297993;297994;297995;297996 297980 9 RYQQEVDR Unmodified 1092.5312 0.53122035 1328 P33176;O60282;Q12840 KIF5B;KIF5C;KIF5A Kinesin-1 heavy chain;Kinesin heavy chain isoform 5C;Kinesin heavy chain isoform 5A yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 7.4321 7.5241 2 0.0082131 4955 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 126.52 69.344 48971000 0 0 0 2744900 3751800 4940500 4004800 3804100 5071400 5299200 0 0 0 6765800 12588000 45054 1328 40377 377791;377792;377793;377794;377795;377796;377797;377798;377799 297997 297997 0 RYQQEVDRIK Unmodified 1333.7102 0.71024735 1328 P33176;O60282;Q12840 KIF5B;KIF5C;KIF5A Kinesin-1 heavy chain;Kinesin heavy chain isoform 5C;Kinesin heavy chain isoform 5A yes no 0 0 2 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 20.169 19.785 3 0.00050489 19861 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 105.52 98.863 334980000 146010000 0 0 13811000 9271900 16436000 17751000 18322000 19871000 19992000 29012000 0 25758000 18745000 0 45055 1328 40378 377800;377801;377802;377803;377804;377805;377806;377807;377808;377809;377810;377811 297998;297999;298000;298001;298002;298003;298004;298005;298006 297999 5 RYTAIGELGK Unmodified 1106.6084 0.60840804 3572 Q8WWH5 TRUB1 Probable tRNA pseudouridine synthase 1 yes yes 0 0 1 By MS/MS 2 0 1 1 46.542 39.064 2 0.015398 53490 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.15 38.805 16027000 16027000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45056 3572 40379 377812 298007;298008;298009;298010 298007 4 RYTCGEAPDYDRSQWLDVK Unmodified 2358.0699 0.069893839 1120 P21266 GSTM3 Glutathione S-transferase Mu 3 yes yes 0 0 2 By MS/MS 2 0 2 2 72.24 64.001 3;4 0.001713 84900 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 30.587 27.348 36236000 36236000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45057 1120 40380 377813;377814 298011;298012 298011 2 RYTIYSPK Unmodified 1026.5498 0.54983053 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS 2 0 1 1 39.425 32.803 2 0.044997 45586 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.25 43.059 38245000 38245000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45058 4819 40381 377815 298013 298013 0 RYTNQTFDK Unmodified 1171.5622 0.56218613 4689 Q9NW08 POLR3B DNA-directed RNA polymerase III subunit RPC2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 20.155 16.14 2;3 0.012184 23324 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.725 37.344 96292000 93393000 0 2899100 0 0 0 0 0 0 0 0 0 0 0 0 45059 4689 40382 377816;377817;377818 298014;298015 298014 2 RYVLEEAEQLEPR Unmodified 1630.8315 0.83148469 3383 Q8NAV1 PRPF38A Pre-mRNA-splicing factor 38A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 66.738 66.965 3 0.00034805 77277 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 49.149 44.444 33533000 0 0 0 0 0 3781400 0 3168500 3178200 4902200 2716600 3509600 2516900 2662800 7096900 45060 3383 40383 377819;377820;377821;377822;377823;377824;377825;377826;377827 298016;298017;298018;298019;298020;298021;298022;298023;298024;298025;298026;298027 298026 11 RYVQPPEMIGPMRPEQFSDEVEPATPEEGEPATQR 2 Oxidation (M) 4028.852 0.85204508 577 Q4V326;Q13065;P0CL82;P0CL81;P0CL80;O76087 GAGE2E;GAGE1;GAGE12I;GAGE12G;GAGE12F;GAGE7 G antigen 2E;G antigen 1;G antigen 12I;G antigen 12G;G antigen 12F;G antigen 7 yes no 0 2 2 By matching By MS/MS 10 0 2 1 1 69.135 69.425 4 1.8268E-39 79000 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.198 65.726 29803000 0 0 0 0 0 0 0 0 0 2550400 0 0 0 0 27253000 45061 577 40384 377828;377829 298028 298028 731;732 1 SAAAEAPTDDQPTDLSLPK Unmodified 1925.9218 0.92181584 2453 Q14865 ARID5B AT-rich interactive domain-containing protein 5B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 64.826 64.988 2 0.034007 74266 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 35.737 24.831 4741800 0 0 0 0 0 0 0 0 4741800 0 0 0 0 0 0 45062 2453 40385 377830;377831;377832;377833 298029;298030;298031;298032 298030 4 SAAAGLGGGGSR Unmodified 959.47846 0.4784565 4223 Q9BXB5 OSBPL10 Oxysterol-binding protein-related protein 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 10.965 11.067 2 0.0040572 8697 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 58.699 43.318 26454000 0 0 0 1932100 1488200 2254200 4608100 2844400 1910300 3306000 2971100 0 2923500 2216500 0 45063 4223 40386 377834;377835;377836;377837;377838;377839;377840;377841;377842;377843 298033;298034;298035;298036;298037;298038 298034 6 SAAAIALPPIAK Unmodified 1121.6808 0.6808447 1638 P50851 LRBA Lipopolysaccharide-responsive and beige-like anchor protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.86 3.4 2 2 10 2 2 1 1 1 1 1 1 1 1 1 1 76.978 75.584 2 2.4018E-05 86809 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 92.051 76.51 297180000 9278600 187000000 0 7260100 5306900 14025000 7008300 4783500 0 0 10647000 12959000 9315100 9381000 20218000 45064 1638 40387 377844;377845;377846;377847;377848;377849;377850;377851;377852;377853;377854;377855;377856;377857 298039;298040;298041;298042;298043;298044;298045;298046;298047;298048;298049;298050;298051;298052;298053 298043 14 SAAAMESAQSSR Oxidation (M) 1210.5248 0.52481434 1536 P48382 RFX5 DNA-binding protein RFX5 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 5.8542 5.9601 2 1.0208E-08 3682 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 136.96 132.54 123640000 0 0 0 10409000 8636200 8569900 13625000 8921900 0 0 12027000 18333000 15371000 13682000 14062000 45065 1536 40388 377858;377859;377860;377861;377862;377863;377864;377865;377866;377867 298054;298055;298056;298057;298058;298059;298060 298055 2441 6 SAAAMESAQSSR Unmodified 1194.5299 0.52989972 1536 P48382 RFX5 DNA-binding protein RFX5 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 11.76 11.909 2 2.9647E-08 10966 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 143.4 136.5 237350000 0 0 0 14192000 12725000 13639000 15115000 25372000 16951000 20714000 18182000 42905000 21353000 16070000 20132000 45066 1536 40388 377868;377869;377870;377871;377872;377873;377874;377875;377876;377877;377878;377879 298061;298062;298063;298064;298065;298066;298067;298068 298062 3 SAAATSPAPHLVAGPLLGTVGK Unmodified 2014.1211 0.12112477 3968 Q96RK0 CIC Protein capicua homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.586 78.69 3 2.52E-08 90888 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 62.064 58.571 177910000 0 0 0 0 10309000 10436000 16220000 13064000 13622000 16092000 14337000 22717000 17118000 18668000 25325000 45067 3968 40389 377880;377881;377882;377883;377884;377885;377886;377887;377888;377889;377890;377891 298069;298070;298071;298072;298073;298074;298075;298076;298077;298078;298079;298080;298081;298082;298083 298083 15 SAADAEGYLAHPVNAYK Unmodified 1775.8479 0.84786304 287 O15460 P4HA2 Prolyl 4-hydroxylase subunit alpha-2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 62.896 58.057 3 0.020665 74539 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 27.43 18.024 193130000 0 189100000 4027900 0 0 0 0 0 0 0 0 0 0 0 0 45068 287 40390 377892;377893 298084;298085 298084 2 SAADDSEAK Unmodified 892.37741 0.37740505 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS 1 0 1 1 106.62 111.88 2 0.082037 92609 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 60.892 12.856 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45069 965 40391 377894 298086 298086 1 SAADDYNRIGSSLYALGTQDSTDICK Unmodified 2820.2872 0.28721642 5032 Q9UNH7 SNX6 Sorting nexin-6;Sorting nexin-6, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 84.586 80.977 3 1.1656E-78 100470 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 137.86 128.4 28331000 0 25669000 2661900 0 0 0 0 0 0 0 0 0 0 0 0 45070 5032 40392 377895;377896 298087 298087 1 SAADEVDGLGVAR Acetyl (Protein N-term) 1300.6259 0.62590859 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 67.172 67.185 2 9.4269E-05 77166 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 100.88 20.904 40763000 0 0 0 4934800 4322200 7492200 4522100 2557500 3340700 3918000 5381800 4294200 0 0 0 45071 1518 40393 377897;377898;377899;377900;377901;377902;377903;377904;377905 298088;298089;298090;298091;298092;298093 298088 6 SAADEVDGLGVARPHYGSVLDNER Acetyl (Protein N-term) 2568.2205 0.22045748 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 75.612 75.647 3 0 86832 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 221.39 213.92 651000000 0 0 0 10829000 28290000 96703000 23511000 44731000 42616000 90991000 0 77215000 30713000 0 205410000 45072 1518 40394 377906;377907;377908;377909;377910;377911;377912;377913;377914;377915 298094;298095;298096;298097;298098;298099;298100;298101;298102;298103 298097 10 SAADSISESVPVGPK Unmodified 1442.7253 0.72528829 1488 P45974 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.62 1.7 1 20 1 2 2 2 1 1 1 2 2 2 1 2 2 56.72 56.552 2;3 1.7246E-28 64488 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 143.17 118.29 454100000 0 42974000 0 25106000 16090000 40172000 21456000 16681000 14742000 35014000 50614000 43369000 21644000 45172000 81063000 45073 1488 40395 377916;377917;377918;377919;377920;377921;377922;377923;377924;377925;377926;377927;377928;377929;377930;377931;377932;377933;377934;377935;377936 298104;298105;298106;298107;298108;298109;298110;298111;298112;298113;298114;298115;298116;298117;298118;298119;298120;298121 298117 17 SAAEAGGVFHR Acetyl (Protein N-term) 1142.5469 0.54687041 4107 Q9BRF8 CPPED1 Serine/threonine-protein phosphatase CPPED1 yes yes 1 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 45.936 46.48 2 6.4019E-06 51850 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 129.38 104.53 45274000 0 0 0 0 0 0 0 0 0 0 9215900 10265000 0 6719400 19073000 45074 4107 40396 377937;377938;377939;377940 298122;298123;298124 298124 3 SAAEAVATSVLTQMASQR Unmodified 1819.9098 0.90981137 1055 P17544 ATF7 Cyclic AMP-dependent transcription factor ATF-7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 1 2 2 2 2 2 2 2 2 87.77 87.875 2;3 1.751E-05 101872 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 49.537 43.994 71688000 0 0 0 0 4786600 3958500 1808000 5547900 3456200 7116100 6958200 6600800 2940100 4756600 23759000 45075 1055 40397 377941;377942;377943;377944;377945;377946;377947;377948;377949;377950;377951;377952;377953;377954;377955;377956;377957;377958;377959;377960;377961 298125;298126;298127;298128;298129;298130;298131;298132;298133;298134;298135;298136;298137 298126 12 SAAEAVATSVLTQMASQR Oxidation (M) 1835.9047 0.90472599 1055 P17544 ATF7 Cyclic AMP-dependent transcription factor ATF-7 yes yes 0 1 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 72.961 72.899 2 2.9912E-15 83687 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 95.417 80.727 17330000 0 0 0 3623400 0 0 4026200 0 0 0 9680900 0 0 0 0 45076 1055 40397 377962;377963;377964 298138;298139 298138 1478 2 SAAEPVASTPASR Unmodified 1242.6204 0.62042929 1585 P49674 CSNK1E Casein kinase I isoform epsilon yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 22.38 22.525 2 0.0011087 23543 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 64.82 50.613 30997000 0 0 0 2126200 2157300 3902100 0 3065300 0 4744500 0 0 4294200 3975300 6731800 45077 1585 40398 377965;377966;377967;377968;377969;377970;377971;377972;377973 298140;298141;298142;298143;298144;298145;298146;298147 298144 8 SAAGFEPVPECSDGAIHSWAVEGPQPEPR Unmodified 3076.3985 0.3984982 2075 Q02413 DSG1 Desmoglein-1 yes yes 0 0 0 By MS/MS 10 0 1 1 79.239 79.241 3 0.017654 91628 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 28.964 22.737 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45078 2075 40399 377974 298148 298148 1 SAAGYPDYYCK Unmodified 1293.5336 0.53358811 199 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 42.692 37.544 2 0.0229 48858 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 57.267 47.002 17723000 0 17723000 0 0 0 0 0 0 0 0 0 0 0 0 0 45079 199 40400 377975 298149 298149 1 SAALHIDLCK Unmodified 1126.5805 0.58047873 3871 Q96HW7 INTS4 Integrator complex subunit 4 yes yes 0 0 0 By MS/MS 2 0 1 1 62.304 54.048 2 0.0043046 72983 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.263 65.368 8074700 8074700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45080 3871 40401 377976 298150 298150 1 SAALQVTK Unmodified 816.47052 0.47051757 3653 Q92733 PRCC Proline-rich protein PRCC yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 20.986 20.148 2 0.019373 21246 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 63.673 24.867 699240000 15896000 172240000 1811700 29042000 34432000 31586000 39993000 20833000 35494000 47896000 74528000 37119000 39703000 39306000 79360000 45081 3653 40402 377977;377978;377979;377980;377981;377982;377983;377984;377985;377986;377987;377988;377989;377990;377991;377992 298151;298152;298153;298154;298155;298156;298157;298158;298159;298160;298161;298162;298163 298161 13 SAAMDLGPMRK 2 Oxidation (M) 1207.5689 0.56892776 4681 Q9NVS9 PNPO Pyridoxine-5'-phosphate oxidase yes yes 0 2 1 By MS/MS 2 0 1 1 51.208 47.287 2 0.03931 59509 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 43.808 10.011 6146800 0 0 6146800 0 0 0 0 0 0 0 0 0 0 0 0 45082 4681 40403 377993 298164 298164 1 SAAMLGNSEDHTALSR Oxidation (M) 1674.7631 0.76314713 428 O60749 SNX2 Sorting nexin-2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 30.973 30.502 3 7.9635E-24 33283 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 118.47 110.88 212290000 0 37602000 19299000 10072000 7774000 14549000 12186000 7388100 10668000 15437000 14367000 22567000 19810000 0 20575000 45083 428 40404 377994;377995;377996;377997;377998;377999;378000;378001;378002;378003;378004;378005;378006 298165;298166;298167;298168;298169;298170;298171;298172;298173;298174;298175;298176;298177;298178;298179;298180;298181 298165 545 17 SAAMLGNSEDHTALSR Unmodified 1658.7682 0.76823251 428 O60749 SNX2 Sorting nexin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40.016 39.525 3 6.7306E-21 44252 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 90.348 83.146 240270000 0 31741000 14635000 10831000 12567000 17710000 11602000 12480000 8530000 20988000 28056000 16465000 11565000 13857000 29245000 45084 428 40404 378007;378008;378009;378010;378011;378012;378013;378014;378015;378016;378017;378018;378019;378020 298182;298183;298184;298185;298186;298187;298188;298189;298190;298191 298182 7 SAAMLGNSEDHTALSRALSQLAEVEEK Unmodified 2856.3924 0.39235019 428 O60749 SNX2 Sorting nexin-2 yes yes 0 0 1 By MS/MS 2 0 1 1 95.135 87.005 4 0.02744 112545 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 21.462 14.738 5136400 5136400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45085 428 40405 378021 298192 298192 1 SAAMTLNER Unmodified 991.47568 0.4756793 4742 Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 26.465 26.643 2 0.010625 28501 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 64.04 40.612 97669000 0 0 0 5951000 7414100 1513300 1455400 11143000 0 11329000 0 14941000 17835000 13164000 12922000 45086 4742 40406 378022;378023;378024;378025;378026;378027;378028;378029;378030;378031 298193;298194;298195;298196;298197;298198;298199 298193 7 SAAMTLNER Oxidation (M) 1007.4706 0.47059393 4742 Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.915 14.078 2 0.005952 13267 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 67.897 40.372 116440000 0 0 0 6941100 8738200 6729200 7266600 5960500 5265400 11293000 13079000 14804000 15383000 8532500 12448000 45087 4742 40406 378032;378033;378034;378035;378036;378037;378038;378039;378040;378041;378042;378043 298200;298201;298202;298203;298204;298205;298206;298207;298208;298209 298209 6118 8 SAANLEYLK Unmodified 1007.5288 0.52876073 3242 Q8IWJ2 GCC2 GRIP and coiled-coil domain-containing protein 2 no no 0 0 0 By MS/MS 2 0 1 1 53.635 47.842 2 0.01494 61975 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.548 55.654 67017000 0 67017000 0 0 0 0 0 0 0 0 0 0 0 0 0 45088 3242 40407 378044 298210 298210 1 SAAPEPIQPISVIPGSGGEK Unmodified 1933.0157 0.015656649 3345 Q8N5C8 TAB3 TGF-beta-activated kinase 1 and MAP3K7-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 78.868 78.878 2 3.6197E-05 91212 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 53.754 47.909 52951000 0 0 0 4281500 8456800 0 6623600 0 0 5786400 8806800 0 0 6816600 12180000 45089 3345 40408 378045;378046;378047;378048;378049;378050;378051;378052 298211;298212;298213;298214;298215;298216;298217;298218 298218 8 SAAPSQLQGNSFK Unmodified 1333.6626 0.66262845 5263 Q9Y620 RAD54B DNA repair and recombination protein RAD54B yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching 10 0 12 1 1 1 2 1 1 1 1 1 1 1 38.457 38.691 2 0.00069206 43089 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 72.848 58.641 85135000 0 0 0 0 6237300 5924500 9854300 16313000 7623900 5627800 8056000 10396000 4522600 4248300 6330800 45090 5263 40409 378053;378054;378055;378056;378057;378058;378059;378060;378061;378062;378063;378064 298219;298220;298221;298222;298223;298224;298225 298219 4 SAAPSSPGSPRPALPATPPATPPAASPSALK Unmodified 2848.5083 0.50830665 4356 Q9H211 CDT1 DNA replication factor Cdt1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.226 72.295 3 8.2307E-20 82727 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.003 50.804 264590000 0 0 0 13712000 18279000 24050000 26124000 15629000 18387000 27622000 26115000 26771000 19426000 18886000 29591000 45091 4356 40410 378065;378066;378067;378068;378069;378070;378071;378072;378073;378074;378075;378076 298226;298227;298228;298229;298230;298231;298232;298233;298234;298235;298236;298237 298229 12 SAAPSTLDSSSTAPAQLGK Unmodified 1787.8901 0.89012178 5240 Q9Y5M8 SRPRB Signal recognition particle receptor subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.188 49.346 2 1.682E-46 55272 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 154.07 139.83 502750000 0 0 0 24325000 26016000 22131000 42664000 27457000 30690000 45380000 48166000 58334000 32986000 54746000 89860000 45092 5240 40411 378077;378078;378079;378080;378081;378082;378083;378084;378085;378086;378087;378088 298238;298239;298240;298241;298242;298243;298244;298245;298246;298247;298248;298249 298239 12 SAAQAAAQTNSNAAGK Unmodified 1459.7015 0.70153315 3405 Q8NC51 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.44 3.27 2 3 22 2 2 1 2 2 2 2 2 2 2 2 2 2 2 12.903 12.841 2;3 0 99617 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 272.1 219.01 2111900000 145100000 51760000 2291700 176540000 135700000 111120000 185030000 92444000 81396000 130610000 0 395340000 169940000 158910000 275720000 45093 3405 40412 378089;378090;378091;378092;378093;378094;378095;378096;378097;378098;378099;378100;378101;378102;378103;378104;378105;378106;378107;378108;378109;378110;378111;378112;378113;378114;378115 298250;298251;298252;298253;298254;298255;298256;298257;298258;298259;298260;298261;298262;298263;298264;298265;298266;298267;298268;298269;298270 298262 16 SAAQMEVASFLLSK Oxidation (M) 1496.7545 0.75447993 2196 Q12834 CDC20 Cell division cycle protein 20 homolog yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 82.677 82.755 2 0.00062416 95848 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 62.338 44.279 24416000 0 0 0 0 1831000 4122400 3658700 0 3238700 0 4347200 4715700 2502300 0 0 45094 2196 40413 378116;378117;378118;378119;378120;378121;378122;378123 298271;298272;298273;298274;298275;298276;298277 298274 3565 5 SAAQMEVASFLLSK Unmodified 1480.7596 0.7595653 2196 Q12834 CDC20 Cell division cycle protein 20 homolog yes yes 0 0 0 By MS/MS 10 0 1 1 88.228 88.378 2 0.00067137 102295 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.55 54.597 4910600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4910600 45095 2196 40413 378124 298278 298278 1 SAAQPSTSPAEVQSLK Unmodified 1599.8104 0.8104149 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.368 43.543 2 2.761E-06 47752 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.417 69.3 96568000 0 0 0 4907900 4604000 8245900 7756800 4502900 9737500 6290900 11244000 12284000 8102300 7033000 11858000 45096 2446 40414 378125;378126;378127;378128;378129;378130;378131;378132;378133;378134;378135;378136 298279;298280;298281;298282;298283;298284;298285;298286;298287;298288;298289;298290;298291 298283 11 SAARESHPHGVK Acetyl (Protein N-term) 1316.6585 0.65854613 127 O00193 SMAP Small acidic protein yes yes 1 0 1 By MS/MS By matching By MS/MS 2.17 0.373 5 1 3 1 2 8.1913 5.074 2;3 5.1064E-06 9263 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 111.5 88.756 2028600000 1762700000 75971000 189980000 0 0 0 0 0 0 0 0 0 0 0 0 45097 127 40415 378137;378138;378139;378140;378141;378142 298292;298293;298294;298295;298296;298297 298295 5 SAARESHPHGVK Unmodified 1274.648 0.64798144 127 O00193 SMAP Small acidic protein yes yes 0 0 1 By MS/MS 2 0 1 1 8.7707 5.132 3 0.037927 8683 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 34.05 10.674 52384000 52384000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45098 127 40415 378143 298298 298298 1 SAASEQHVFK Unmodified 1102.5407 0.5407224 3642 Q92620 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 20.591 17.378 2 7.6581E-06 23019 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.63 68.715 70855000 0 38505000 32350000 0 0 0 0 0 0 0 0 0 0 0 0 45099 3642 40416 378144;378145 298299;298300;298301;298302 298300 4 SAASREDLVGPEVGASPQSGRK Unmodified 2197.1087 0.10872219 3188 Q86X27 RALGPS2 Ras-specific guanine nucleotide-releasing factor RalGPS2 yes yes 0 0 2 By MS/MS By matching By MS/MS By matching 10 0 4 1 1 1 1 37.481 37.64 4 1.361E-05 41891 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 50.752 42.152 24496000 0 0 0 0 0 6984700 0 4880200 0 10119000 0 0 0 2512200 0 45100 3188 40417 378146;378147;378148;378149 298303 298303 1 SAASYALGSISVGNLPEYLPFVLQEITSQPK Unmodified 3278.7075 0.70745996 3170 Q86VP6 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 104.33 100.15 3 0.017557 120186 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 19.144 13.824 4467100 0 4467100 0 0 0 0 0 0 0 0 0 0 0 0 0 45101 3170 40418 378150;378151 298304 298304 1 SAATSGAGSTTSGVVSGSLGSR Unmodified 1895.9185 0.9184618 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 2 2 1 2 1 1 2 2 1 1 2 44.026 44.28 2;3 1.1767E-111 48445 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 220.6 199.81 394860000 0 0 0 11864000 19138000 42198000 24368000 22835000 14676000 21653000 42835000 61060000 23517000 26823000 83893000 45102 3119 40419 378152;378153;378154;378155;378156;378157;378158;378159;378160;378161;378162;378163;378164;378165;378166;378167;378168;378169 298305;298306;298307;298308;298309;298310;298311;298312;298313;298314;298315;298316;298317;298318;298319;298320;298321;298322;298323;298324 298309 20 SAATSPTGSSHGTPTHQSK Unmodified 1837.8555 0.85546761 452 O75061 DNAJC6 Putative tyrosine-protein phosphatase auxilin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 4 24 1 1 2 2 2 2 2 2 2 2 2 2 2 2 2 6.4005 6.2132 3;4 1.5292E-31 6358 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 124.26 113.6 195100000 35252000 0 25737000 5530600 5709100 8325700 11431000 8079500 8807500 10193000 22360000 14681000 11694000 10334000 16963000 45103 452 40420 378170;378171;378172;378173;378174;378175;378176;378177;378178;378179;378180;378181;378182;378183;378184;378185;378186;378187;378188;378189;378190;378191;378192;378193;378194;378195;378196;378197 298325;298326;298327;298328;298329;298330;298331;298332;298333;298334;298335;298336;298337;298338;298339 298333 15 SAATWDER Unmodified 934.41446 0.41445926 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 21.362 21.713 2 0.023317 21434 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.436 39.136 44799000 0 0 0 0 0 6382300 0 0 0 8148000 0 10839000 0 7958100 11472000 45104 2047 40421 378198;378199;378200;378201;378202 298340;298341;298342;298343 298342 4 SAAVNREYYRQQMEEK Unmodified 2000.9374 0.9374231 3138 Q86TU7 SETD3 Histone-lysine N-methyltransferase setd3 yes yes 0 0 2 By MS/MS 2 0 1 1 36.237 29.809 4 0.026511 41794 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 30.575 13.96 13825000 13825000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45105 3138 40422 378203 298344 298344 1 SAAVPLINPAGLGPGGPGHLLLK Unmodified 2148.2419 0.24190861 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS 10 0 1 1 88.91 89.053 3 2.2613E-10 103044 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.928 64.962 8537300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8537300 45106 2556 40423 378204 298345;298346 298346 2 SAAVSEQQQLEQK Unmodified 1444.7158 0.71578623 488 O75376 NCOR1 Nuclear receptor corepressor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 25.234 25.436 2 6.8156E-08 26992 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 143.24 110.82 172500000 0 0 0 14311000 11738000 12072000 11930000 12634000 9659600 14529000 10277000 21612000 12707000 10036000 30989000 45107 488 40424 378205;378206;378207;378208;378209;378210;378211;378212;378213;378214;378215;378216 298347;298348;298349;298350;298351;298352;298353;298354;298355;298356;298357;298358 298351 11 SAAVTAGK Acetyl (Protein N-term) 745.39702 0.39701828 1710 P53350 PLK1 Serine/threonine-protein kinase PLK1 yes yes 1 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 9.31 2.4 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 23.699 24.278 1 0.038057 18649 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 67.032 24.032 42857000 1978900 0 0 1721200 2360400 4165100 2943500 2482300 2795800 4261500 4284600 4972000 3718600 2971000 4202400 45108 1710 40425 378217;378218;378219;378220;378221;378222;378223;378224;378225;378226;378227;378228;378229 298359;298360 298360 0 SACDTVDTWLDDTAK Unmodified 1696.725 0.72503029 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 77.168 77.207 2 3.2594E-31 89157 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 150.06 143.4 113560000 0 0 0 2231900 6118000 9966300 0 11358000 0 15192000 12086000 12834000 6664000 11295000 25816000 45109 2392 40426 378230;378231;378232;378233;378234;378235;378236;378237;378238;378239 298361;298362;298363;298364;298365;298366 298361 5 SACEQFIQQQTK Unmodified 1466.6824 0.68237762 3890 Q96JB2 COG3 Conserved oligomeric Golgi complex subunit 3 yes yes 0 0 0 By MS/MS 2 0 1 1 43.069 37.921 2 0.013176 49286 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.311 71.076 23262000 0 23262000 0 0 0 0 0 0 0 0 0 0 0 0 0 45110 3890 40427 378240 298367 298367 1 SADAAAGAPLPR Acetyl (Protein N-term) 1137.5778 0.57783619 209 O14745 SLC9A3R1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.83 1 8 1 1 1 1 1 1 1 1 1 57.838 58.719 2 1.2423E-08 59272 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 123.86 107.08 138980000 11931000 0 0 0 0 4753300 0 6246100 0 9093000 22929000 22410000 7718200 17479000 36419000 45111 209 40428 378241;378242;378243;378244;378245;378246;378247;378248;378249 298368;298369;298370;298371;298372;298373;298374;298375;298376 298372 9 SADAGSFSPTPGQIGGAVK Unmodified 1745.8584 0.85842773 156 O00443 PIK3C2A Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 62.513 62.565 2 0.00023315 71585 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 72.089 59.322 45714000 0 0 0 2642600 2745900 4428000 3155800 4849000 2496700 4667200 6844600 5103200 3994200 4786400 0 45112 156 40429 378250;378251;378252;378253;378254;378255;378256;378257;378258;378259;378260 298377;298378;298379;298380;298381;298382;298383;298384;298385 298377 9 SADDFIDK Unmodified 909.40798 0.40797689 5094 Q9Y2A7 NCKAP1 Nck-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.82 3.56 3 8 1 2 1 1 1 1 1 1 1 1 34.87 33.525 1;2 0.02128 36233 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.107 42.747 224440000 8091200 166180000 0 0 5991900 6575700 4380000 0 0 5174000 7010100 0 7056000 6183500 7798000 45113 5094 40430 378261;378262;378263;378264;378265;378266;378267;378268;378269;378270;378271 298386;298387;298388;298389;298390;298391;298392;298393;298394 298391 9 SADDSLSGVVR Unmodified 1104.5411 0.54111633 2517 Q15334 LLGL1 Lethal(2) giant larvae protein homolog 1 yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 42.234 42.367 2 0.0040318 46089 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 62.463 39.723 47794000 0 0 0 6420600 5146200 0 0 0 4095100 0 6500400 0 8757300 7388200 9486200 45114 2517 40431 378272;378273;378274;378275;378276;378277;378278 298395;298396;298397 298396 3 SADEQSIYEK Unmodified 1168.5248 0.52479757 4402 Q9H4L7 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 22.124 22.316 2 0.00055195 23443 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 128.38 74.415 59492000 0 0 0 4726900 0 8754700 7204300 0 0 0 0 14400000 14905000 9501600 0 45115 4402 40432 378279;378280;378281;378282;378283;378284 298398;298399;298400;298401;298402;298403 298398 6 SADESGQALLAAGHYASDEVR Unmodified 2145.9927 0.99268938 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 70.059 70.38 3 2.6811E-09 80267 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.98 71.933 17838000 0 0 0 0 0 0 0 0 0 0 0 0 0 4677800 13160000 45116 2344 40433 378285;378286 298404;298405;298406 298404 3 SADESGQALLAAGHYASDEVREK Unmodified 2403.1302 0.13024549 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 3 15 1 1 1 3 1 1 1 2 1 2 1 1 2 68.335 67.547 3;4 6.1595E-72 76568 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.74 95.731 470390000 78931000 184930000 52637000 0 0 16567000 4804100 6883400 5186900 15140000 9018500 26060000 4698000 6513800 59020000 45117 2344 40434 378287;378288;378289;378290;378291;378292;378293;378294;378295;378296;378297;378298;378299;378300;378301;378302;378303;378304 298407;298408;298409;298410;298411;298412;298413;298414;298415;298416;298417;298418;298419;298420;298421;298422;298423 298414 17 SADEVLFTGVK Unmodified 1164.6027 0.60265396 5254 Q9Y5X3 SNX5 Sorting nexin-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 68.461 66.906 2 4.5881E-05 87847 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 114.51 83.44 688170000 13938000 454820000 9812600 10129000 8852200 25716000 16256000 13840000 9653800 20463000 20971000 19200000 13817000 18038000 32663000 45118 5254 40435 378305;378306;378307;378308;378309;378310;378311;378312;378313;378314;378315;378316;378317;378318;378319;378320;378321 298424;298425;298426;298427;298428;298429;298430;298431;298432;298433;298434;298435;298436;298437;298438;298439;298440;298441 298432 18 SADFAELEVLR Unmodified 1248.635 0.63501672 5041 Q9UNS1 TIMELESS Protein timeless homolog yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 81.303 81.397 2 0.007174 93788 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 63.283 38.508 41109000 0 0 0 0 2582000 6536600 2790600 4918500 5169000 0 7685200 7096300 0 4331100 0 45119 5041 40436 378322;378323;378324;378325;378326;378327;378328;378329;378330;378331 298442;298443;298444;298445;298446;298447;298448 298443 7 SADFSQSTSIGIK Unmodified 1339.662 0.66195975 4669 Q9NVI1 FANCI Fanconi anemia group I protein yes yes 0 0 0 By MS/MS 2 0 1 1 58.757 52.914 2 0.0021232 68107 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.89 91.208 72954000 0 72954000 0 0 0 0 0 0 0 0 0 0 0 0 0 45120 4669 40437 378332 298449 298449 1 SADFVVEAIGDDVGTLGFSVEGPSQAK Unmodified 2694.3025 0.30245578 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.27 0.442 11 4 7 6 2 97.931 92.91 2;3;4 6.4457E-173 115015 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 188.98 179.14 1293000000 805650000 377670000 109630000 0 0 0 0 0 0 0 0 0 0 0 0 45121 1124 40438 378333;378334;378335;378336;378337;378338;378339;378340;378341;378342;378343;378344;378345;378346;378347 298450;298451;298452;298453;298454;298455;298456;298457;298458;298459;298460;298461;298462;298463;298464;298465;298466;298467;298468;298469;298470;298471;298472;298473 298471 23 SADGAEADGSTQVTVEEPVQQPSVVDR Acetyl (Protein N-term) 2812.2999 0.29988959 421 O60664 PLIN3 Perilipin-3 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 27 1 2 3 2 3 3 3 3 2 2 2 1 72.015 72.108 2;3 2.9428E-208 83202 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 202.17 199.13 885310000 0 0 0 13928000 73702000 58289000 46425000 90241000 48760000 139030000 127790000 114350000 45361000 64190000 63248000 45122 421 40439 378348;378349;378350;378351;378352;378353;378354;378355;378356;378357;378358;378359;378360;378361;378362;378363;378364;378365;378366;378367;378368;378369;378370;378371;378372;378373;378374 298474;298475;298476;298477;298478;298479;298480;298481;298482;298483;298484;298485;298486;298487;298488;298489 298482 16 SADGEEAAAVPGPPPEPQVPQLR Unmodified 2311.1444 0.14443899 3473 Q8TAP8 PPP1R35 Protein phosphatase 1 regulatory subunit 35 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 76.841 76.932 3 0.00011786 88755 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 40.756 28.628 45851000 0 0 0 0 3446500 3007900 3747300 4395400 3173100 5203100 7146900 6250000 4988500 4492200 0 45123 3473 40440 378375;378376;378377;378378;378379;378380;378381;378382;378383;378384 298490;298491;298492;298493;298494;298495;298496;298497 298497 7 SADGSAPAGEGEGVTLQR Unmodified 1700.7966 0.79655575 2059 Q01650 SLC7A5 Large neutral amino acids transporter small subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.39 39.571 2 1.2751E-26 43651 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 143.25 123.26 339980000 0 0 0 19827000 36084000 18756000 23807000 24051000 13899000 28878000 34361000 42560000 38502000 30001000 29252000 45124 2059 40441 378385;378386;378387;378388;378389;378390;378391;378392;378393;378394;378395;378396 298498;298499;298500;298501;298502;298503;298504;298505;298506;298507;298508;298509 298503 12 SADGSPALK Unmodified 844.42905 0.42904669 1547 P48637 GSS Glutathione synthetase yes yes 0 0 0 By MS/MS 10 0 1 1 11.513 11.896 2 0.048871 10111 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.396 14.289 5901300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5901300 45125 1547 40442 378397 298510 298510 1 SADGVIVSGVK Unmodified 1030.5659 0.56587452 5032 Q9UNH7 SNX6 Sorting nexin-6;Sorting nexin-6, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 3 3 1 43.841 39.105 2 0.00046175 49751 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 103.26 62.987 428020000 0 423040000 4985400 0 0 0 0 0 0 0 0 0 0 0 0 45126 5032 40443 378398;378399;378400;378401;378402;378403;378404 298511;298512;298513;298514;298515;298516;298517;298518 298515 8 SADLEHDQTMLDK Oxidation (M) 1517.6668 0.66678713 3094 Q7Z460 CLASP1 CLIP-associating protein 1 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 30.353 25.958 2 0.0065922 33903 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.633 48.172 9201600 0 9201600 0 0 0 0 0 0 0 0 0 0 0 0 0 45127 3094 40444 378405;378406 298519 298519 4703 1 SADLEHDQTMLDK Unmodified 1501.6719 0.67187251 3094 Q7Z460 CLASP1 CLIP-associating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 2 1 1 1 39.079 39.259 2;3 0.0020778 43520 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 54.598 49.105 130510000 0 0 0 6304500 5944800 13166000 8062800 12064000 6063700 11766000 10172000 13577000 11144000 14774000 17470000 45128 3094 40444 378407;378408;378409;378410;378411;378412;378413;378414;378415;378416;378417;378418;378419 298520;298521;298522;298523;298524 298523 4 SADLEIFPAENFK Unmodified 1479.7246 0.72456001 5048 Q9UPM8 AP4E1 AP-4 complex subunit epsilon-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 83.98 83.274 2 0.00034583 103408 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.96 104.71 91209000 0 52171000 0 1650000 1866800 3227300 2746600 2277300 0 7515200 0 5221900 0 4118200 10415000 45129 5048 40445 378420;378421;378422;378423;378424;378425;378426;378427;378428;378429;378430;378431 298525;298526;298527;298528;298529;298530;298531 298528 7 SADSDRDVFNEK Unmodified 1381.611 0.61098681 3762 Q96BP3 PPWD1 Peptidylprolyl isomerase domain and WD repeat-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 28.697 24.354 3 0.020725 34101 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 39.394 12.425 70216000 17890000 50432000 1893800 0 0 0 0 0 0 0 0 0 0 0 0 45130 3762 40446 378432;378433;378434;378435 298532;298533 298533 2 SADSLYDPFIVPK Unmodified 1450.7344 0.73439641 2594 Q15911 ZFHX3 Zinc finger homeobox protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 84.069 84.173 2 0.00080861 97405 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 70.056 59.533 48229000 0 0 0 0 4575900 0 4902000 5857800 3879600 6066900 0 7195700 4191600 3560800 7999000 45131 2594 40447 378436;378437;378438;378439;378440;378441;378442;378443;378444 298534;298535;298536;298537;298538;298539;298540;298541;298542;298543;298544 298539 11 SADTLWDIQK Unmodified 1175.5823 0.58225287 836 P07195 LDHB L-lactate dehydrogenase B chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.26 3.77 1 5 2 15 4 3 1 1 1 1 1 1 1 1 2 2 1 1 2 69.653 68.762 1;2 1.0736E-08 94489 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 182.98 132.38 17481000000 867140000 14602000000 260000000 12813000 18011000 27505000 0 20281000 17920000 34091000 308300000 230630000 36417000 209060000 835950000 45132 836 40448 378445;378446;378447;378448;378449;378450;378451;378452;378453;378454;378455;378456;378457;378458;378459;378460;378461;378462;378463;378464;378465;378466;378467 298545;298546;298547;298548;298549;298550;298551;298552;298553;298554;298555;298556;298557;298558;298559;298560;298561;298562;298563;298564;298565;298566;298567;298568;298569;298570;298571;298572;298573 298562 25 SADTLWGIQK Unmodified 1117.5768 0.57677356 719 P00338 LDHA L-lactate dehydrogenase A chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.62 3.92 1 6 2 12 3 5 1 1 1 1 1 1 1 1 1 1 1 1 1 66.508 64.856 2 1.9127E-48 80917 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 217.66 178.02 11920000000 518420000 9757200000 249950000 23277000 12644000 18055000 16236000 16879000 12592000 27205000 255210000 142840000 21086000 143910000 704610000 45133 719 40449 378468;378469;378470;378471;378472;378473;378474;378475;378476;378477;378478;378479;378480;378481;378482;378483;378484;378485;378486;378487;378488 298574;298575;298576;298577;298578;298579;298580;298581;298582;298583;298584;298585;298586;298587;298588;298589;298590;298591;298592;298593;298594;298595;298596 298580 23 SAEAAAEATK Unmodified 947.45599 0.45598972 2672 Q3LXA3 DAK Bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase (cyclizing);ATP-dependent dihydroxyacetone kinase;FAD-AMP lyase (cyclizing) yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS 7.22 3.94 1 2 6 1 2 1 1 1 1 1 1 19.85 19.165 2 0.0044926 5151 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 72.643 44.536 98043000 22910000 58184000 0 1184900 0 4433900 0 0 0 0 0 1801100 1669300 0 7859100 45134 2672 40450 378489;378490;378491;378492;378493;378494;378495;378496;378497 298597;298598;298599;298600;298601;298602 298597 5 SAEAELQSK Unmodified 961.47164 0.47163978 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 13.938 14.084 2 0.0010404 13536 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 143.28 109.2 77433000 0 0 0 12299000 9247400 0 8785200 0 5201000 0 0 12457000 12865000 7962000 8615600 45135 2501 40451 378498;378499;378500;378501;378502;378503;378504;378505;378506 298603;298604;298605;298606;298607;298608;298609;298610 298609 8 SAEAGIAGEAQSK Unmodified 1217.5888 0.58879481 3095 Q7Z478 DHX29 ATP-dependent RNA helicase DHX29 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS 10 0 12 1 2 1 1 1 1 1 1 1 1 1 36.276 36.405 2 0.0038657 21524 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 65.842 48.602 36104000 0 0 0 3419000 2339800 3639000 2666800 0 2181200 3574400 4436700 3933800 631420 3055200 6226400 45136 3095 40452 378507;378508;378509;378510;378511;378512;378513;378514;378515;378516;378517;378518 298611;298612;298613;298614 298613 4 SAEAVGVK Unmodified 759.41267 0.41266834 1221 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed yes yes 0 0 0 By MS/MS 10 0 1 1 9.2888 9.6945 2 0.028761 7946 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 56.547 19.453 1777700 0 0 0 0 0 0 0 0 0 0 1777700 0 0 0 0 45137 1221 40453 378519 298615 298615 1 SAEAYENFLR Unmodified 1198.5619 0.56185177 3994 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.235 67.367 2 0.0017421 77166 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 88.948 81.755 50497000 0 0 0 2580400 0 3788200 2854500 5396300 0 5706900 5814500 5004800 3846000 6721000 8784600 45138 3994 40454 378520;378521;378522;378523;378524;378525;378526;378527;378528;378529;378530;378531 298616;298617;298618;298619;298620;298621;298622;298623;298624;298625;298626;298627;298628 298622 13 SAEDELAMR Unmodified 1020.4546 0.45460951 2349 Q13868 EXOSC2 Exosome complex component RRP4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 35.827 36.066 2 0.010476 40140 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 64.265 45.534 23471000 0 0 0 0 0 2566400 0 3653200 0 4364100 3686900 0 4111300 5089100 0 45139 2349 40455 378532;378533;378534;378535;378536;378537;378538;378539 298629;298630;298631;298632;298633;298634 298629 6 SAEDELAMR Oxidation (M) 1036.4495 0.44952413 2349 Q13868 EXOSC2 Exosome complex component RRP4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 23.625 23.805 2 0.018057 24851 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 49.418 39.507 30692000 0 0 0 2647500 3150100 0 2835600 2139800 1757100 3164000 3228600 5427000 3952100 2390500 0 45140 2349 40455 378540;378541;378542;378543;378544;378545;378546;378547;378548;378549 298635;298636;298637 298636 3836 3 SAEDSFTGFVR Unmodified 1214.5568 0.5567664 2920 Q6P1M3 LLGL2 Lethal(2) giant larvae protein homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.897 65.984 2 0.0027105 75617 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 66.435 47.995 49409000 0 0 0 4386700 3446800 4534200 4415900 2228500 3017900 4839600 4650500 5155400 3670400 3581600 5481300 45141 2920 40456 378550;378551;378552;378553;378554;378555;378556;378557;378558;378559;378560;378561 298638;298639;298640;298641;298642;298643;298644;298645;298646;298647;298648;298649 298639 12 SAEEEAADLPTKPTK Unmodified 1585.7835 0.78353145 3570 Q8WW12 PCNP PEST proteolytic signal-containing nuclear protein yes yes 0 0 1 By MS/MS By matching By matching By MS/MS 10 0 4 1 1 1 1 34.918 34.79 3 0.016819 37421 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 31.319 26.025 8378800 0 0 0 1554800 1479900 0 1672300 0 0 0 0 0 0 3671700 0 45142 3570 40457 378562;378563;378564;378565 298650 298650 1 SAEEGELAESK Unmodified 1148.5197 0.51971219 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 16.846 16.744 2 6.8989E-06 16817 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 140.75 118.01 47191000 0 0 0 9835300 10390000 17328000 9637500 0 0 0 0 0 0 0 0 45143 4285 40458 378566;378567;378568;378569 298651;298652;298653;298654;298655 298654 5 SAEEINSEAFLASVEK Unmodified 1722.8312 0.83120992 4447 Q9H892 TTC12 Tetratricopeptide repeat protein 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 81.064 80.621 2 0.00054411 99445 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.44 86.722 67927000 0 37466000 0 0 1657900 0 2918600 3103000 0 4558600 0 7842800 2346500 2244900 5788400 45144 4447 40459 378570;378571;378572;378573;378574;378575;378576;378577;378578 298656;298657;298658;298659;298660;298661 298657 6 SAEEMPYLK Unmodified 1066.5005 0.50049707 2640 Q16875 PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase yes yes 0 0 0 By MS/MS 2 0 1 1 56.326 50.511 2 0.0080137 65252 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.318 80.85 33432000 0 33432000 0 0 0 0 0 0 0 0 0 0 0 0 0 45145 2640 40460 378579 298662 298662 1 SAEEPQEK Unmodified 916.41379 0.41379055 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 0 0 By MS/MS 1 0 1 1 106.81 112.08 2 0.0025405 92802 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 121.31 51.685 51574000 51574000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45146 1564 40461 378580 298663 298663 1 SAEEVEEIK Unmodified 1032.4975 0.49752018 3537 Q8WUA2 PPIL4 Peptidyl-prolyl cis-trans isomerase-like 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 26.38 27.066 2 0.013227 28581 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.118 1.3363 14785000 0 0 0 0 0 0 0 0 0 0 0 5249700 0 0 9535000 45147 3537 40462 378581;378582;378583 298664;298665;298666 298666 3 SAEFLLHMLK Oxidation (M) 1203.6322 0.63217995 1076 P18621 RPL17 60S ribosomal protein L17 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 4 32 3 1 1 2 3 1 3 3 3 3 4 4 2 3 68.278 67.628 2;3 7.9707E-10 76582 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 149.82 115.73 1143900000 85472000 0 5625200 16693000 29170000 102220000 16605000 60958000 81259000 91606000 76227000 214340000 147500000 62231000 153970000 45148 1076 40463 378584;378585;378586;378587;378588;378589;378590;378591;378592;378593;378594;378595;378596;378597;378598;378599;378600;378601;378602;378603;378604;378605;378606;378607;378608;378609;378610;378611;378612;378613;378614;378615;378616;378617;378618;378619 298667;298668;298669;298670;298671;298672;298673;298674;298675;298676;298677;298678;298679;298680;298681;298682;298683;298684;298685;298686;298687;298688;298689;298690;298691;298692;298693;298694;298695 298693 1550 19 SAEFLLHMLK Unmodified 1187.6373 0.63726532 1076 P18621 RPL17 60S ribosomal protein L17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 82.213 82.362 2 0.026136 95143 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.377 36.376 48273000 0 0 0 0 0 3716200 0 5776500 2693000 0 0 0 0 0 36088000 45149 1076 40463 378620;378621;378622;378623 298696 298696 1 SAEIDSDDTGGSAAQK Unmodified 1550.6696 0.6696239 1328 P33176 KIF5B Kinesin-1 heavy chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.59 3.76 2 2 1 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 26.819 26.628 2 4.3258E-98 15551 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 195.25 184.42 702090000 67251000 93224000 0 33814000 27087000 35949000 31192000 22231000 21728000 55337000 70709000 63742000 44832000 51023000 83974000 45150 1328 40464 378624;378625;378626;378627;378628;378629;378630;378631;378632;378633;378634;378635;378636;378637;378638;378639;378640 298697;298698;298699;298700;298701;298702;298703;298704;298705;298706;298707;298708;298709;298710;298711;298712;298713;298714;298715;298716;298717;298718;298719 298716 23 SAEITGVRSETISVPQEIK Unmodified 2043.0848 0.084798847 718 O96033 MOCS2 Molybdopterin synthase sulfur carrier subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 73.989 68.909 3 1.1317E-05 84677 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 72.819 59.782 230450000 11535000 176940000 41976000 0 0 0 0 0 0 0 0 0 0 0 0 45151 718 40465 378641;378642;378643;378644 298720;298721;298722;298723;298724 298724 5 SAEIYPIMDK Oxidation (M) 1181.5638 0.56382561 1250 P29466 CASP1 Caspase-1;Caspase-1 subunit p20;Caspase-1 subunit p10 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 51.821 46.486 2 0.026105 60216 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.955 35.187 20830000 0 20830000 0 0 0 0 0 0 0 0 0 0 0 0 0 45152 1250 40466 378645;378646 298725 298725 1 SAELLLGK Unmodified 829.49092 0.49091866 3061 Q7LBC6 KDM3B Lysine-specific demethylase 3B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 2 1 49.702 49.562 2 0.015996 56602 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 67.981 8.9997 235320000 0 0 0 36410000 48414000 0 49988000 0 48717000 0 0 0 0 51792000 0 45153 3061 40467 378647;378648;378649;378650;378651;378652;378653;378654;378655 298726;298727;298728;298729;298730;298731;298732;298733;298734 298731 8 SAELPDAVGPIVQLQEK Unmodified 1792.9571 0.95707914 3949 Q96PU8 QKI Protein quaking yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 83.027 83.09 2 0.0013257 96126 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 50.467 27.934 72880000 0 0 0 1831600 3923400 5109300 4665500 4820900 5298900 8067000 6154000 11461000 7082100 5261900 9204800 45154 3949 40468 378656;378657;378658;378659;378660;378661;378662;378663;378664;378665;378666;378667 298735;298736;298737;298738;298739 298739 5 SAELVGTFVSPEVFLK Unmodified 1721.924 0.9239881 3204 Q86Y56 DNAAF5 Dynein assembly factor 5, axonemal yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 94.025 94.131 2 0.00071452 109608 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.848 56.039 28156000 0 0 0 0 1131000 1822300 813650 1861100 1328300 6091600 3290700 2996100 0 2732900 6088600 45155 3204 40469 378668;378669;378670;378671;378672;378673;378674;378675;378676;378677 298740;298741;298742;298743;298744;298745;298746;298747;298748;298749;298750 298748 11 SAENPPSGSVRK Unmodified 1227.6208 0.62076364 2472 Q15014 MORF4L2 Mortality factor 4-like protein 2 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 16 1 1 1 1 1 1 2 2 2 1 2 1 8.0365 8.1898 2;3 2.6722E-05 5703 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 111.46 73.98 93977000 0 0 0 1832600 1302500 1292700 1813100 1631100 2019000 9177900 29553000 28762000 3828900 8600300 4163100 45156 2472 40470 378678;378679;378680;378681;378682;378683;378684;378685;378686;378687;378688;378689;378690;378691;378692;378693 298751;298752 298751 2 SAEPRPELGPGQETGTNSR Unmodified 1981.9453 0.94534525 5191 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.732 32.867 3 7.8073E-24 36024 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 73.783 46.287 73601000 0 0 0 7485200 5324600 7087000 5883100 4268600 4296700 9729000 10100000 0 6539100 4000300 8887500 45157 5191 40471 378694;378695;378696;378697;378698;378699;378700;378701;378702;378703;378704;378705 298753;298754;298755;298756;298757;298758;298759;298760;298761;298762;298763;298764 298761 12 SAEPSANTTLVSETEEEGSVPAFGAAAK Unmodified 2749.293 0.2930133 2289 Q13428 TCOF1 Treacle protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 78.505 77.981 3 6.7885E-72 90419 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 114.01 110.85 526680000 0 89023000 0 15554000 37655000 26307000 21020000 32918000 30496000 54747000 46089000 52691000 26889000 36399000 56891000 45158 2289 40472 378706;378707;378708;378709;378710;378711;378712;378713;378714;378715;378716;378717;378718;378719 298765;298766;298767;298768;298769;298770;298771;298772;298773;298774;298775;298776;298777 298766 13 SAEPSPTVMSTSLGSNLSELDR Unmodified 2277.0795 0.079455473 1558 P49023 PXN Paxillin yes yes 0 0 0 By MS/MS 10 0 1 1 82.392 82.594 3 2.7991E-08 95259 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.904 54.797 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45159 1558 40473 378720 298778 298778 1 SAEPSPTVMSTSLGSNLSELDR Oxidation (M) 2293.0744 0.074370095 1558 P49023 PXN Paxillin yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 75.276 75.441 2 8.2857E-34 87136 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 102.38 89.5 18953000 0 0 0 0 0 0 2420800 0 0 0 4058400 6690700 2767100 3015900 0 45160 1558 40473 378721;378722;378723;378724;378725 298779;298780;298781 298781 2474 3 SAEQLTTFLK Unmodified 1136.6077 0.60773933 603 O94915 FRYL Protein furry homolog-like yes yes 0 0 0 By MS/MS By matching 2.33 0.471 2 1 2 1 77.574 73.915 2 0.00061836 92490 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.05 55.369 78282000 0 76224000 2058700 0 0 0 0 0 0 0 0 0 0 0 0 45161 603 40474 378726;378727;378728 298782;298783 298782 2 SAESPQDAADLFTDLENAFQGK Unmodified 2353.071 0.070999276 3787 Q96CW5 TUBGCP3 Gamma-tubulin complex component 3 yes yes 0 0 0 By MS/MS 2 0 1 1 100.82 96.105 2 8.579E-40 118765 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.25 117.67 11130000 0 11130000 0 0 0 0 0 0 0 0 0 0 0 0 0 45162 3787 40475 378729 298784;298785 298784 2 SAESQAVTELPK Unmodified 1258.6405 0.64049603 1026 P15822 HIVEP1 Zinc finger protein 40 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 45.803 45.8 2 0.00050512 51360 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 78.655 59.875 35757000 0 0 0 3948400 4249700 0 4197700 0 5457300 7019800 5864500 0 0 5019400 0 45163 1026 40476 378730;378731;378732;378733;378734;378735;378736;378737 298786;298787;298788;298789;298790;298791;298792;298793 298787 8 SAESQGRSEILMSLQK Unmodified 1762.8883 0.88834765 4815 Q9P2D3 HEATR5B HEAT repeat-containing protein 5B yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 71.905 64.99 3 0.013568 82956 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 38.808 23.287 43963000 9508500 34455000 0 0 0 0 0 0 0 0 0 0 0 0 0 45164 4815 40477 378738;378739 298794;298795 298795 1 SAETRESTQLSPADLTEGKPTDPSK Unmodified 2644.2828 0.28278297 2168 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 0 0 2 By MS/MS By MS/MS By MS/MS 2.29 0.452 5 2 1 4 2 56.935 51.596 3;4 2.1785E-45 66753 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.08 108.12 362230000 33130000 198260000 130830000 0 0 0 0 0 0 0 0 0 0 0 0 45165 2168 40478 378740;378741;378742;378743;378744;378745;378746 298796;298797;298798;298799;298800;298801;298802;298803;298804;298805;298806 298798 11 SAEVDDGAAEK Unmodified 1090.4778 0.47784737 3193 Q86XA9 HEATR5A HEAT repeat-containing protein 5A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 7 1 1 1 1 1 1 1 8.639 8.7406 2 0.043105 6954 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 36.334 26.746 4870100 0 0 0 0 718120 1038100 507560 607190 469690 0 0 872490 0 0 656900 45166 3193 40479 378747;378748;378749;378750;378751;378752;378753 298807 298807 1 SAEVPEAASAEEQK Acetyl (Protein N-term) 1486.6787 0.67873203 1780 P56211 ARPP19 cAMP-regulated phosphoprotein 19 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.36 4.27 6 1 4 2 5 1 1 1 1 53.145 53.102 2 2.5505E-17 88825 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 118.9 94.05 151960000 77552000 0 0 0 0 0 0 0 0 0 14180000 15094000 0 11617000 33513000 45167 1780 40480 378754;378755;378756;378757;378758;378759;378760;378761;378762;378763;378764 298808;298809;298810;298811;298812;298813;298814;298815;298816;298817;298818;298819;298820 298816 13 SAEYGSSLQSSR Unmodified 1270.579 0.5789584 99 Q6KB66;CON__Q6KB66-1 KRT80 Keratin, type II cytoskeletal 80 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.19 23.395 2 2.3589E-05 23933 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 91.549 74.319 + 239240000 0 0 0 57762000 13003000 12000000 10755000 32461000 8650600 20244000 14111000 28079000 19051000 11374000 11749000 45168 99 40481 378765;378766;378767;378768;378769;378770;378771;378772;378773;378774;378775;378776 298821;298822;298823;298824;298825;298826;298827;298828;298829;298830;298831;298832;298833;298834;298835 298832 14 SAFAPFGK Unmodified 823.42284 0.4228391 2048 Q01085 TIAL1 Nucleolysin TIAR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 54.919 53.669 2 0.015415 60963 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 68.915 49.352 722410000 303060000 148950000 56031000 0 10124000 22031000 20633000 12702000 13642000 22921000 24164000 0 25357000 23451000 39347000 45169 2048 40482 378777;378778;378779;378780;378781;378782;378783;378784;378785;378786;378787;378788;378789 298836;298837;298838;298839;298840;298841;298842;298843;298844;298845;298846;298847 298839 12 SAFEEEGK Unmodified 895.39233 0.39232683 2484 Q15042 RAB3GAP1 Rab3 GTPase-activating protein catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 13.195 13.403 2 0.016045 12821 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 67.903 31.717 24859000 0 0 0 1257500 0 0 2705600 1976500 1358100 3153200 3300300 3041400 2755300 1733300 3577900 45170 2484 40483 378790;378791;378792;378793;378794;378795;378796;378797;378798;378799 298848;298849;298850;298851 298851 4 SAFEETGK Unmodified 867.39741 0.39741221 4134 Q9BT09 CNPY3 Protein canopy homolog 3 yes yes 0 0 0 By MS/MS 2 0 2 2 14.34 11.026 1;2 0.018072 14804 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.296 66.804 162920000 0 162920000 0 0 0 0 0 0 0 0 0 0 0 0 0 45171 4134 40484 378800;378801 298852;298853;298854 298853 2 SAFLCGVMK Oxidation (M) 1027.4831 0.48307287 322;407 O43390;O60506 HNRNPR;SYNCRIP Heterogeneous nuclear ribonucleoprotein R;Heterogeneous nuclear ribonucleoprotein Q no no 0 1 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 50.05 47.062 2 0.015953 58892 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 77.741 61.597 75051000 0 56748000 9976600 0 0 0 0 0 0 0 0 8326900 0 0 0 45172 322;407 40485 378802;378803;378804 298855;298856;298857 298856 408 3 SAFLCGVMK Unmodified 1011.4882 0.48815825 322;407 O43390;O60506 HNRNPR;SYNCRIP Heterogeneous nuclear ribonucleoprotein R;Heterogeneous nuclear ribonucleoprotein Q no no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66.632 65.731 2 0.016271 85894 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.229 60.383 382430000 192690000 102100000 0 5196200 4216000 6409700 3525600 4282400 5059500 4263500 8973400 14973000 8106600 7855500 14783000 45173 322;407 40485 378805;378806;378807;378808;378809;378810;378811;378812;378813;378814;378815;378816;378817;378818 298858;298859;298860;298861;298862 298858 4 SAFLCGVMKTYR Unmodified 1431.7003 0.70027629 322;407 O43390;O60506 HNRNPR;SYNCRIP Heterogeneous nuclear ribonucleoprotein R;Heterogeneous nuclear ribonucleoprotein Q no no 0 0 1 By MS/MS 10 0 1 1 53.717 54.371 3 0.047194 61095 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 22.72 5.509 46277000 0 0 0 0 0 0 0 0 0 0 0 46277000 0 0 0 45174 322;407 40486 378819 298863 298863 1 SAFLQVQPR Unmodified 1044.5716 0.5716286 4801 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 53.528 53.551 2 0.0030679 60272 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 91.9 64.77 127220000 0 0 0 12559000 14237000 0 20589000 14032000 15767000 0 0 0 21941000 0 28099000 45175 4801 40487 378820;378821;378822;378823;378824;378825;378826;378827;378828;378829;378830;378831 298864;298865;298866;298867;298868;298869;298870;298871;298872;298873;298874;298875;298876;298877 298872 14 SAFLSQR Unmodified 807.4239 0.42390173 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.011 28.205 2 0.023899 30348 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 94.262 21.223 422570000 0 0 0 21567000 26195000 24909000 33774000 35394000 25318000 37285000 41889000 47940000 42483000 44180000 41639000 45176 1364 40488 378832;378833;378834;378835;378836;378837;378838;378839;378840;378841;378842;378843 298878;298879;298880 298879 3 SAFPFSDK Unmodified 897.42323 0.42323303 2428 Q14677 CLINT1 Clathrin interactor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55.063 54.489 2 0.020339 61179 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 62.88 48.894 490140000 0 105270000 4097800 27818000 24428000 27502000 42031000 30957000 28331000 35426000 39098000 47106000 1016900 32021000 45032000 45177 2428 40489 378844;378845;378846;378847;378848;378849;378850;378851;378852;378853;378854;378855;378856;378857 298881;298882;298883;298884;298885 298885 4 SAFPHLQDAQVK Unmodified 1339.6884 0.68844927 237 O14980 XPO1 Exportin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.84 3.46 6 3 23 3 4 2 1 2 2 2 2 2 2 2 2 2 2 2 52.171 50.654 2;3 2.7237E-13 64425 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 169.52 141.78 5699700000 2631400000 1306200000 714830000 10865000 51355000 129610000 64652000 81941000 58757000 110920000 95558000 95151000 82442000 88688000 177320000 45178 237 40490 378858;378859;378860;378861;378862;378863;378864;378865;378866;378867;378868;378869;378870;378871;378872;378873;378874;378875;378876;378877;378878;378879;378880;378881;378882;378883;378884;378885;378886;378887;378888;378889 298886;298887;298888;298889;298890;298891;298892;298893;298894;298895;298896;298897;298898;298899;298900;298901;298902;298903;298904;298905;298906;298907;298908;298909;298910;298911;298912;298913;298914;298915;298916;298917 298911 24 SAFQEEDFPALVSSVPK Unmodified 1849.9098 0.90979459 3149 Q86UK7 ZNF598 Zinc finger protein 598 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 1 2 1 2 2 2 2 1 1 1 2 86.667 86.763 2;3 0.00017656 100742 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 88.552 78.003 192920000 0 0 0 1388100 9144100 13754000 7372300 13753000 15108000 29710000 20753000 16767000 8380100 13057000 43735000 45179 3149 40491 378890;378891;378892;378893;378894;378895;378896;378897;378898;378899;378900;378901;378902;378903;378904;378905;378906;378907 298918;298919;298920;298921;298922;298923;298924;298925;298926;298927;298928 298927 11 SAFSCFHYSTEEIK Unmodified 1704.7454 0.7453718 3333 Q8N4Q1 CHCHD4 Mitochondrial intermembrane space import and assembly protein 40 yes yes 0 0 0 By MS/MS 2 0 1 1 74.507 66.377 3 0.018225 87781 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.196 49.151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45180 3333 40492 378908 298929 298929 1 SAFSEAALEK Acetyl (Protein N-term) 1093.5292 0.52915466 3942 Q96P16 RPRD1A Regulation of nuclear pre-mRNA domain-containing protein 1A yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.25 2.49 1 11 1 1 1 1 1 1 1 1 1 1 1 1 68.188 68.257 2 0.001134 78579 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 76.221 50.327 77843000 0 0 0 4082200 4207100 5597100 6734000 0 4757700 9108200 8065400 8774200 7949900 7289500 11277000 45181 3942 40493 378909;378910;378911;378912;378913;378914;378915;378916;378917;378918;378919;378920 298930;298931;298932;298933;298934;298935;298936;298937;298938;298939;298940;298941 298938 12 SAFSLNSYK Unmodified 1015.4975 0.4974606 211 O14772 FPGT Fucose-1-phosphate guanylyltransferase yes yes 0 0 0 By MS/MS By matching By MS/MS 2 0 3 1 1 1 58.754 52.775 2 0.00074134 71279 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 128.69 108.17 147300000 71102000 72914000 3285800 0 0 0 0 0 0 0 0 0 0 0 0 45182 211 40494 378921;378922;378923 298942 298942 1 SAFSNLFGGEPLSYTR Unmodified 1744.842 0.84204938 762 P02786 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes yes 0 0 0 By MS/MS 10 0 1 1 88.045 88.195 2 0.00053835 102062 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.14 47.45 4570900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4570900 45183 762 40495 378924 298943 298943 1 SAFSSAETTELSGK Unmodified 1413.6624 0.66235368 3920 Q96LJ7 DHRS1 Dehydrogenase/reductase SDR family member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 48.269 47.179 2 1.6213E-16 53323 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 115.33 92.422 107370000 0 14727000 0 0 0 0 0 0 0 0 37196000 0 0 25543000 29904000 45184 3920 40496 378925;378926;378927;378928;378929;378930;378931;378932;378933;378934;378935;378936;378937 298944;298945;298946;298947;298948;298949;298950;298951;298952;298953;298954;298955;298956 298953 13 SAFTPATATGSSPSPVLGQGEK Unmodified 2089.0328 0.032763277 2581 Q15811;CON__ENSEMBL:ENSBTAP00000001528 ITSN1 Intersectin-1 yes no 0 0 0 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 64.942 65.139 2 8.8365E-07 74040 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.186 47.275 + 13129000 0 0 0 0 0 1367600 3052600 0 0 3204900 0 0 0 0 5503400 45185 2581 40497 378938;378939;378940;378941 298957 298957 1 SAGAETDNAVPQGSK Unmodified 1430.6638 0.66375066 4120 Q9BRX5 GINS3 DNA replication complex GINS protein PSF3 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 15.431 15.738 2 1.0477E-05 14518 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 99.215 68.343 28379000 0 0 0 0 0 2599700 0 1385800 0 0 6978300 4391300 0 3085300 9938400 45186 4120 40498 378942;378943;378944;378945;378946;378947 298958;298959 298958 2 SAGAMLKPHAPK Unmodified 1206.6543 0.65431237 2828 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog yes yes 0 0 1 By MS/MS 2 0 1 1 30.652 24.933 3 0.0057618 35045 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.991 35.755 30948000 30948000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45187 2828 40499 378948 298960 298960 1 SAGAPASVSGQDADGSTSPR Unmodified 1816.8187 0.81874776 1461 P42679 MATK Megakaryocyte-associated tyrosine-protein kinase yes yes 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 25.853 26.097 2 3.3602E-05 27742 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 57.804 51.701 26187000 0 0 0 2077600 0 3308500 1669900 2627000 2001000 2310500 2776000 4170700 2709400 0 2535900 45188 1461 40500 378949;378950;378951;378952;378953;378954;378955;378956;378957;378958 298961;298962 298961 2 SAGDGTDWEK Unmodified 1064.4411 0.44106794 371 O43815 STRN Striatin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.146 20.308 2 0.0047747 19781 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.614 62.931 29974000 0 0 0 2997500 1585600 2233800 1926800 1357500 1528600 2973000 4327500 0 3515500 2327800 5200600 45189 371 40501 378959;378960;378961;378962;378963;378964;378965;378966;378967;378968;378969;378970 298963;298964;298965;298966;298967;298968;298969;298970;298971 298965 9 SAGEALGSSGTPPVR Unmodified 1384.6947 0.69465686 3728 Q969V6 MKL1 MKL/myocardin-like protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching 10 0 8 1 1 1 1 1 1 1 1 38.015 38.132 2 7.6437E-19 42538 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 107.85 93.64 77664000 0 0 0 3109900 4620700 6141100 0 7413500 0 8098500 14262000 16221000 17798000 0 0 45190 3728 40502 378971;378972;378973;378974;378975;378976;378977;378978 298972;298973;298974;298975;298976;298977 298972 5 SAGEEEDGPVLTDEQK Unmodified 1702.7534 0.75335353 2848 Q66PJ3 ARL6IP4 ADP-ribosylation factor-like protein 6-interacting protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.912 36.093 2 1.3259E-23 39306 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 149.38 138.48 85549000 0 0 0 6383300 4936400 7271700 5941600 3729200 5387500 8216100 6637900 11377000 9279900 6063800 10324000 45191 2848 40503 378979;378980;378981;378982;378983;378984;378985;378986;378987;378988;378989;378990 298978;298979;298980;298981;298982;298983;298984;298985;298986;298987;298988;298989 298983 12 SAGEGEVEK Unmodified 904.41379 0.41379055 2982 Q6UX04 CWC27 Peptidyl-prolyl cis-trans isomerase CWC27 homolog yes yes 0 0 0 By MS/MS 1 0 1 1 106.96 107.85 2 0.026225 99996 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 69.825 16.145 25776000 0 25776000 0 0 0 0 0 0 0 0 0 0 0 0 0 45192 2982 40504 378991 298990 298990 1 SAGETVPEGYTCVEATPSALQANLNYGSLK Unmodified 3126.4816 0.48155913 2830 Q5VZ89 DENND4C DENN domain-containing protein 4C yes yes 0 0 0 By MS/MS 2 0 1 1 87.652 82.843 3 1.9368E-26 102932 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.538 75.619 52827000 0 52827000 0 0 0 0 0 0 0 0 0 0 0 0 0 45193 2830 40505 378992 298991 298991 1 SAGFHPSGSVLAVGTVTGR Unmodified 1798.9326 0.93259572 699 O95834 EML2 Echinoderm microtubule-associated protein-like 2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 68.15 68.544 3 0.01262 77849 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.37 33.37 27697000 0 0 0 0 0 0 0 0 0 0 5921900 0 0 0 21776000 45194 699 40506 378993;378994 298992 298992 0 SAGGEPGPEAGR Unmodified 1083.4945 0.49450049 690 O95785 WIZ Protein Wiz yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 10.374 10.515 2 3.8456E-08 9626 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 123.86 113.58 135940000 0 0 0 6426800 6222600 11396000 11990000 8428400 10164000 13739000 11856000 13084000 13390000 16400000 12843000 45195 690 40507 378995;378996;378997;378998;378999;379000;379001;379002;379003;379004;379005;379006 298993;298994;298995;298996;298997;298998;298999;299000;299001;299002;299003;299004 298993 7 SAGGIGVAVSCIR Unmodified 1245.65 0.64995528 1171 P23921 RRM1 Ribonucleoside-diphosphate reductase large subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 61.507 61.679 2 2.2566E-08 69597 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 108.31 69.763 73618000 0 0 0 0 2366200 3810800 2360100 4109300 3794300 5196600 13000000 14853000 6193800 5209400 12724000 45196 1171 40508 379007;379008;379009;379010;379011;379012;379013;379014;379015;379016;379017 299005;299006;299007;299008;299009;299010;299011;299012;299013;299014;299015 299008 11 SAGGRPGSGPQLGTGR Unmodified 1453.7386 0.73858736 226 O14908 GIPC1 PDZ domain-containing protein GIPC1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.008 19.203 3 0.0066987 19066 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 37.042 31.726 51667000 0 0 0 3845400 1969700 3283400 3032900 2330400 1710400 6242600 4378100 7824000 3457300 3244700 10348000 45197 226 40509 379018;379019;379020;379021;379022;379023;379024;379025;379026;379027;379028;379029 299016;299017;299018;299019 299019 4 SAGLEEIEQELTSK Unmodified 1532.757 0.75698235 4426 Q9H6U6 BCAS3 Breast carcinoma-amplified sequence 3 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 85.224 84.279 2 1.1545E-05 104693 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.12 110.38 70789000 0 31574000 0 0 4560200 0 0 6738700 0 0 7357800 0 3536700 4832600 12189000 45198 4426 40510 379030;379031;379032;379033;379034;379035;379036;379037;379038 299020;299021;299022;299023;299024 299020 5 SAGLFQNPK Unmodified 960.50288 0.50288033 194 O14618 CCS Copper chaperone for superoxide dismutase yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 37.343 37.798 2 0.015568 40419 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.281 28.769 28004000 0 0 0 0 0 2878200 0 0 0 0 6201900 4616600 0 3803200 10504000 45199 194 40511 379039;379040;379041;379042;379043 299025;299026 299025 2 SAGPSDHIDSSVTGVQR Unmodified 1711.8125 0.81254017 454 O75113 N4BP1 NEDD4-binding protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.021 37.202 3 0.00030915 41264 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.76 43.161 61403000 0 0 0 3352800 2116000 4970300 3822400 3648800 3822800 5603200 5808400 8307000 4204900 5298900 10447000 45200 454 40512 379044;379045;379046;379047;379048;379049;379050;379051;379052;379053;379054;379055 299027;299028;299029;299030;299031;299032;299033;299034;299035;299036 299027 10 SAGQGEVLVYVEDPAGHQEEAK Unmodified 2312.0921 0.092069069 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.53 2.94 1 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 69.173 68.141 3 5.5937E-32 83660 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 113.54 109.43 496020000 35911000 67122000 0 7565500 15576000 36317000 16866000 15813000 20859000 43550000 41300000 41155000 21807000 34905000 97271000 45201 1124 40513 379056;379057;379058;379059;379060;379061;379062;379063;379064;379065;379066;379067;379068;379069;379070 299037;299038;299039;299040;299041;299042;299043;299044;299045;299046;299047;299048;299049;299050;299051;299052;299053;299054 299044 18 SAGSATHPGAGGR Acetyl (Protein N-term) 1166.5428 0.54284767 3123 Q7Z7F0 KIAA0907 UPF0469 protein KIAA0907 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 10.147 10.27 2 7.0754E-09 8982 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 108.43 94.274 54348000 0 0 0 5914300 0 6131600 5258500 0 3726900 6333500 0 8304300 7358100 0 11320000 45202 3123 40514 379071;379072;379073;379074;379075;379076;379077;379078 299055;299056;299057;299058;299059;299060;299061 299057 7 SAGSATHPGAGGRR Acetyl (Protein N-term) 1322.644 0.64395869 3123 Q7Z7F0 KIAA0907 UPF0469 protein KIAA0907 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 7.0094 7.1055 3 1.1526E-12 4989 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 88.087 75.51 86332000 0 0 0 0 8204100 8258600 11187000 0 11838000 19515000 0 0 13408000 13922000 0 45203 3123 40515 379079;379080;379081;379082;379083;379084;379085;379086;379087 299062;299063;299064;299065;299066;299067;299068;299069;299070 299063 9 SAGSIPGEHSTDNNR Unmodified 1540.6866 0.68661137 2108 Q04864 REL Proto-oncogene c-Rel yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 14.238 14.4 3 0.0063859 14021 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 37.657 29.058 40449000 0 0 0 3585500 1499500 2820800 2369800 0 0 4939800 4427300 4445300 4286100 3793600 8281100 45204 2108 40516 379088;379089;379090;379091;379092;379093;379094;379095;379096;379097 299071;299072;299073;299074 299074 4 SAGSIPGER Unmodified 872.43519 0.4351947 2099 Q04206 RELA Transcription factor p65 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 16.683 16.831 2 0.0058337 15487 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.679 39.121 70631000 0 0 0 3189900 2555800 4167700 4592800 3743700 3158500 8977700 0 9620700 7477000 8379300 14768000 45205 2099 40517 379098;379099;379100;379101;379102;379103;379104;379105;379106;379107;379108 299075;299076;299077;299078 299076 4 SAGTDDGFTDFK Unmodified 1259.5306 0.53061123 5023 Q9UMZ2 SYNRG Synergin gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 49.516 49.844 2 0.0026775 56297 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 62.466 57.683 54939000 0 0 0 0 0 6393800 6309600 0 7058000 0 0 13286000 0 8503600 13388000 45206 5023 40518 379109;379110;379111;379112;379113;379114;379115;379116 299079;299080;299081;299082;299083;299084;299085;299086 299080 8 SAGTVELDDQIQANLPDEQVLSEEEIDENFK Unmodified 3474.6162 0.61619793 841 P07384 CAPN1 Calpain-1 catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 2 2 2 2 93.055 88.115 3 6.5719E-35 110311 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.149 79.001 41575000 11587000 29987000 0 0 0 0 0 0 0 0 0 0 0 0 0 45207 841 40519 379117;379118;379119;379120 299087;299088;299089 299087 3 SAGVEQLMYIK Oxidation (M) 1253.6326 0.63257388 2403 Q14320 FAM50A Protein FAM50A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 1 2 1 2 1 2 2 1 1 1 2 60.106 60.257 2 0.00026227 68611 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 86.67 71.908 87560000 0 0 0 3837500 4257800 9830900 7473100 7747500 4195100 9711300 10445000 9849100 4506400 3605500 12101000 45208 2403 40521 379121;379122;379123;379124;379125;379126;379127;379128;379129;379130;379131;379132;379133;379134;379135;379136;379137 299090;299091;299092;299093;299094;299095;299096;299097;299098;299099;299100;299101;299102;299103;299104 299090 3940 14 SAGVQCFGPTAEAAQLESSK Unmodified 2036.9473 0.94731909 1134 P22102 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 70.13 70.205 2;3 5.2689E-54 79999 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 155.98 149.29 366280000 0 0 0 11478000 10783000 31723000 17614000 17313000 14637000 25435000 41537000 59570000 23709000 31342000 81135000 45209 1134 40522 379138;379139;379140;379141;379142;379143;379144;379145;379146;379147;379148;379149;379150;379151;379152;379153;379154;379155;379156;379157;379158;379159;379160;379161 299105;299106;299107;299108;299109;299110;299111;299112;299113;299114;299115;299116;299117 299108 13 SAHAGTYEVR Unmodified 1089.5203 0.52032131 1659 P51571 SSR4 Translocon-associated protein subunit delta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.373 12.522 2 0.0060165 11498 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 66.621 30.741 36309000 0 0 0 3257200 1802200 1512600 2143300 2917800 2051500 4065300 2477900 5912400 2754400 2443500 4970700 45210 1659 40523 379162;379163;379164;379165;379166;379167;379168;379169;379170;379171;379172;379173 299118;299119;299120;299121;299122;299123;299124;299125;299126 299126 8 SAHATAPVNIAGSR Unmodified 1350.7004 0.70041094 5066 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 2 1 2 1 1 1 2 1 1 2 2 2 31.132 31.322 2;3 3.8109E-08 33350 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 96.229 87.275 366330000 0 0 0 39508000 5592700 14799000 6189500 6891200 4139400 67614000 8732700 14554000 59292000 54026000 84991000 45211 5066 40524 379174;379175;379176;379177;379178;379179;379180;379181;379182;379183;379184;379185;379186;379187;379188;379189;379190;379191 299127;299128;299129;299130;299131;299132;299133;299134;299135;299136 299135 9 SAHFSTLAIK Unmodified 1073.5869 0.58694431 271 O15294 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 45.681 46.032 2 5.0268E-05 50235 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 144.12 105.16 46841000 0 0 0 0 0 5435200 6788800 0 6658200 0 0 13021000 0 0 14938000 45212 271 40525 379192;379193;379194;379195;379196;379197 299137;299138;299139;299140 299138 4 SAHLTNPWNEHK Unmodified 1432.6848 0.68476088 3926 Q96MU7 YTHDC1 YTH domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 32.392 32.736 3 0.014872 34634 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 26.703 20.409 21463000 0 0 0 0 0 5979400 0 0 1870100 2775700 0 5372700 0 0 5465200 45213 3926 40526 379198;379199;379200;379201;379202 299141 299141 1 SAHSLQPSISQK Unmodified 1281.6677 0.66771383 3289 Q8IYW5 RNF168 E3 ubiquitin-protein ligase RNF168 yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 29.296 24.503 2;3 0.0002017 34454 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 106.4 51.983 57203000 46599000 0 10604000 0 0 0 0 0 0 0 0 0 0 0 0 45214 3289 40527 379203;379204;379205 299142;299143;299144 299143 1 SAHTLGPTPSR Unmodified 1122.5782 0.57817054 2289 Q13428 TCOF1 Treacle protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 15.149 15.532 2 0.0021905 14372 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.847 47.319 10537000 0 0 0 0 0 0 0 0 0 2331000 3265600 0 0 0 4940000 45215 2289 40528 379206;379207;379208 299145;299146;299147 299146 3 SAHVNSLAQDETK Unmodified 1398.6739 0.67392142 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.3 3.22 4 1 18 3 2 2 1 1 1 1 1 2 3 2 2 2 18.099 17.546 2;3 2.685E-10 23963 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 142.1 117.87 228490000 0 77024000 8729200 9149200 7066200 10338000 10142000 7138700 0 10535000 14974000 26234000 17539000 10805000 18812000 45216 2291 40529 379209;379210;379211;379212;379213;379214;379215;379216;379217;379218;379219;379220;379221;379222;379223;379224;379225;379226;379227;379228;379229;379230;379231 299148;299149;299150;299151;299152;299153;299154;299155;299156;299157;299158;299159;299160;299161;299162;299163;299164;299165;299166 299154 16 SAHVTVSGGTPK Unmodified 1139.5935 0.59348625 4233 Q9BXS6 NUSAP1 Nucleolar and spindle-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 7.38 3.71 6 1 14 2 3 2 1 1 1 2 1 2 1 1 1 1 2 14.661 13.651 2;3 8.1682E-23 19741 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 192.38 166.49 427550000 165530000 127140000 83213000 0 1635000 4777000 1623200 6241200 6321700 14116000 2837900 4321300 862820 2895800 6047100 45217 4233 40530 379232;379233;379234;379235;379236;379237;379238;379239;379240;379241;379242;379243;379244;379245;379246;379247;379248;379249;379250;379251;379252 299167;299168;299169;299170;299171;299172;299173;299174;299175;299176;299177;299178;299179;299180 299176 11 SAICRVTLLDASEYECEVEK Unmodified 2371.1036 0.10356173 4397 Q9H4G0 EPB41L1 Band 4.1-like protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 83.909 75.778 3 0.0021168 99086 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 41.115 33.098 6774400 6774400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45218 4397 40531 379253 299181 299181 1 SAIDLEEMASGLNK Oxidation (M) 1492.7079 0.70792366 1826 P61011 SRP54 Signal recognition particle 54 kDa protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.69 2.88 3 2 24 4 1 2 2 2 2 2 2 2 2 2 2 2 2 62.156 61.375 2 7.9095E-31 77371 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 147.91 123.03 686830000 0 161340000 1178300 25505000 36845000 40752000 49171000 40086000 32594000 47897000 53423000 61817000 55611000 33162000 47453000 45219 1826 40532 379254;379255;379256;379257;379258;379259;379260;379261;379262;379263;379264;379265;379266;379267;379268;379269;379270;379271;379272;379273;379274;379275;379276;379277;379278;379279;379280;379281;379282 299182;299183;299184;299185;299186;299187;299188;299189;299190;299191;299192;299193;299194;299195;299196;299197;299198;299199;299200;299201;299202;299203;299204;299205;299206;299207;299208;299209 299189 2969 27 SAIDLEEMASGLNK Unmodified 1476.713 0.71300904 1826 P61011 SRP54 Signal recognition particle 54 kDa protein yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.051 81.111 2 1.3776E-60 93778 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 220.1 204.21 699110000 0 0 0 26423000 34769000 53646000 34100000 75647000 39583000 61741000 76541000 68334000 53430000 52982000 121920000 45220 1826 40532 379283;379284;379285;379286;379287;379288;379289;379290;379291;379292;379293;379294 299210;299211;299212;299213;299214;299215;299216;299217;299218;299219;299220 299210 11 SAIDLTPIVVEDK Unmodified 1398.7606 0.76061116 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 80.843 80.189 2 7.9625E-13 92418 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 133.42 123.19 1159300000 0 561950000 7825700 22260000 27695000 73672000 30190000 25891000 45666000 55065000 56084000 61243000 45888000 58692000 87147000 45221 2451 40533 379295;379296;379297;379298;379299;379300;379301;379302;379303;379304;379305;379306;379307;379308;379309;379310;379311 299221;299222;299223;299224;299225;299226;299227;299228;299229;299230;299231;299232;299233;299234;299235;299236;299237;299238;299239 299226 19 SAIDLTPIVVEDKEEK Unmodified 1784.9408 0.94076037 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.64 2.9 2 2 18 1 3 2 1 1 2 2 1 2 2 2 2 1 75.133 74.626 2;3 4.3504E-05 85971 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 96.745 71.892 462330000 0 90047000 0 26858000 22045000 14443000 33792000 36899000 13638000 40510000 48797000 57532000 41643000 36128000 0 45222 2451 40534 379312;379313;379314;379315;379316;379317;379318;379319;379320;379321;379322;379323;379324;379325;379326;379327;379328;379329;379330;379331;379332;379333 299240;299241;299242;299243;299244;299245;299246;299247;299248;299249;299250;299251;299252;299253;299254;299255;299256;299257;299258;299259;299260;299261 299252 17 SAIEIYLK Unmodified 935.53278 0.53278348 2895 Q6N069 NAA16 N-alpha-acetyltransferase 16, NatA auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 68.367 68.463 2 0.018051 79079 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 64.757 8.6356 172480000 0 0 0 0 8455200 8667600 12271000 11949000 15582000 31277000 34194000 50083000 0 0 0 45223 2895 40535 379334;379335;379336;379337;379338;379339;379340;379341 299262;299263;299264;299265;299266;299267;299268;299269;299270;299271;299272 299263 11 SAIEQVR Unmodified 801.43447 0.43446642 2189 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 17.783 17.955 2 0.024641 17947 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 82.386 4.89 30873000 0 0 0 0 8160600 0 0 0 0 0 0 0 0 0 22712000 45224 2189 40536 379342;379343 299273 299273 1 SAIESDVDFWDK Unmodified 1410.6303 0.63032527 1627 P50542 PEX5 Peroxisomal targeting signal 1 receptor yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 5.4 3.77 2 1 2 2 1 1 1 79.925 77.887 2 0.004503 95867 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.927 45.056 53775000 0 39455000 2530400 0 0 0 0 0 0 0 0 0 2651600 0 9138000 45225 1627 40537 379344;379345;379346;379347;379348 299274;299275;299276;299277 299274 4 SAIGEGMTRK Unmodified 1048.5335 0.53352853 1121;1018 P21281;P15313 ATP6V1B2;ATP6V1B1 V-type proton ATPase subunit B, brain isoform;V-type proton ATPase subunit B, kidney isoform no no 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 20.086 16.376 2 0.0074382 23571 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.69 39.713 153370000 151070000 0 2292600 0 0 0 0 0 0 0 0 0 0 0 0 45226 1121;1018 40538 379349;379350 299278 299278 1 SAIIETYVMDSR Unmodified 1383.6704 0.67041595 2689 Q4V328 GRIPAP1 GRIP1-associated protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 74.037 74.377 2 0.040863 85294 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 34.695 19.362 4004800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4004800 45227 2689 40539 379351 299279 299279 1 SAIIQNVEK Unmodified 1000.5553 0.55530983 1083 P19174 PLCG1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 yes yes 0 0 0 By MS/MS 3 0 1 1 38.885 34.253 2 0.02624 42676 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 69.812 19.772 5238000 0 5238000 0 0 0 0 0 0 0 0 0 0 0 0 0 45228 1083 40540 379352 299280 299280 1 SAILGLPQPLLELNDSPVFK Unmodified 2150.1987 0.19870639 4491 Q9HAV4 XPO5 Exportin-5 yes yes 0 0 0 By MS/MS 2 0 1 1 100.81 96.099 3 0.00011885 118924 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 32.833 29.495 37865000 0 37865000 0 0 0 0 0 0 0 0 0 0 0 0 0 45229 4491 40541 379353 299281 299281 1 SAILQENSTLSASNK Unmodified 1561.7948 0.79476484 5285 Q9Y6I4 USP3 Ubiquitin carboxyl-terminal hydrolase 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.281 46.448 2 3.5011E-27 52174 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 161.94 142.7 185450000 0 0 0 7963600 10110000 13665000 12575000 15899000 6813800 18912000 23999000 25596000 15167000 11107000 23640000 45230 5285 40542 379354;379355;379356;379357;379358;379359;379360;379361;379362;379363;379364;379365 299282;299283;299284;299285;299286;299287;299288;299289;299290;299291;299292;299293 299288 12 SAIMEENERDHR Unmodified 1485.663 0.66303916 5107 Q9Y2K1 ZBTB1 Zinc finger and BTB domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 13.175 13.334 3 0.023636 11768 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 30.438 13.496 26963000 0 0 0 0 2121500 2714500 1609700 1600800 1213000 3851000 3480600 3287700 4199200 2884900 0 45231 5107 40543 379366;379367;379368;379369;379370;379371;379372;379373;379374;379375 299294;299295 299294 2 SAINEVVTR Unmodified 987.53491 0.53490874 1926 P62899 RPL31 60S ribosomal protein L31 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 36.563 36.803 2 2.1919E-05 40679 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 136.21 75.448 1496400000 0 0 0 0 107330000 133900000 99858000 97361000 92072000 145640000 132520000 178920000 144740000 139390000 224650000 45232 1926 40544 379376;379377;379378;379379;379380;379381;379382;379383;379384;379385;379386 299296;299297;299298;299299;299300;299301;299302;299303;299304;299305;299306 299299 7 SAINSLQFSSSK Unmodified 1267.6408 0.64083038 564 O75943 RAD17 Cell cycle checkpoint protein RAD17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 52.342 52.632 2 0.0034341 59421 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 71.555 63.234 67677000 0 0 0 0 0 7049700 3766700 3985700 3836800 8733000 8284300 8387800 5896800 5476000 12260000 45233 564 40545 379387;379388;379389;379390;379391;379392;379393;379394;379395;379396;379397 299307;299308;299309;299310;299311;299312;299313;299314;299315 299311 6 SAIPAEESDQLLIRPLGAGQEVGR Acetyl (Protein N-term) 2547.3293 0.32927965 4963 Q9UKF6 CPSF3 Cleavage and polyadenylation specificity factor subunit 3 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 87.593 87.692 3 7.2647E-15 101472 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.672 71.095 92572000 0 0 0 0 5891200 5873200 2934400 7952700 0 19363000 10385000 9354900 4712200 0 26105000 45234 4963 40546 379398;379399;379400;379401;379402;379403;379404;379405;379406 299316;299317;299318;299319;299320;299321;299322;299323;299324;299325;299326 299320 11 SAIPEQIISSTLSSPSSNAPDPCAK Unmodified 2556.2377 0.23774703 35 A8CG34;Q96HA1;Q6PJE2 POM121C;POM121;POMZP3 Nuclear envelope pore membrane protein POM 121C;Nuclear envelope pore membrane protein POM 121;POM121 and ZP3 fusion protein yes no 0 0 0 By MS/MS 10 0 1 1 83.813 83.571 3 0.024893 96823 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 18.248 7.5405 1741400 0 0 0 0 1741400 0 0 0 0 0 0 0 0 0 0 45235 35 40547 379407 299327 299327 1 SAIPHPLIMGVIR Oxidation (M) 1418.8068 0.80679027 1838 P61201 COPS2 COP9 signalosome complex subunit 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 72.616 72.789 3 0.0033634 82959 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.425 31.326 47471000 0 0 0 0 0 6647000 4195600 4980000 3280200 0 7366200 0 4041200 5405300 11556000 45236 1838 40548 379408;379409;379410;379411;379412;379413;379414;379415 299328 299328 2983 1 SAIPHPLIMGVIR Unmodified 1402.8119 0.81187565 1838 P61201 COPS2 COP9 signalosome complex subunit 2 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 79.855 80.059 3 0.0019664 92121 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.878 25.915 12420000 0 0 0 0 0 0 0 0 907850 0 0 0 0 0 11512000 45237 1838 40548 379416;379417 299329 299329 1 SAIQNLHSFDPFADASK Acetyl (Protein N-term) 1888.8955 0.89554151 1442 P41567 EIF1 Eukaryotic translation initiation factor 1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.66 6 1 15 1 4 2 1 1 1 2 1 2 2 1 2 2 90.222 88.898 2;3 0 110073 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 331.8 304.13 1621500000 28374000 1448800000 19180000 0 1884900 2970300 2050200 5631900 2624000 12106000 15359000 11789000 0 12322000 58395000 45238 1442 40549 379418;379419;379420;379421;379422;379423;379424;379425;379426;379427;379428;379429;379430;379431;379432;379433;379434;379435;379436;379437;379438;379439 299330;299331;299332;299333;299334;299335;299336;299337;299338;299339;299340;299341;299342;299343;299344;299345;299346;299347 299333 16 SAIQNLHSFDPFADASK Unmodified 1846.885 0.88497683 1442 P41567 EIF1 Eukaryotic translation initiation factor 1 yes yes 0 0 0 By MS/MS 2 0 1 1 86.273 81.499 3 0.010312 101319 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 34.781 25.366 24698000 0 24698000 0 0 0 0 0 0 0 0 0 0 0 0 0 45239 1442 40549 379440 299348 299348 1 SAISDHLK Unmodified 869.46068 0.46068117 4878 Q9UFW8 CGGBP1 CGG triplet repeat-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 23.976 20.004 2 0.025379 28607 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.229 33.859 43022000 41784000 0 1238100 0 0 0 0 0 0 0 0 0 0 0 0 45240 4878 40550 379441;379442 299349 299349 1 SAIVDVLTNR Unmodified 1086.6033 0.60332266 572 O76027 ANXA9 Annexin A9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.14 70.218 2 0.0016584 79882 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.309 65.148 95920000 0 0 0 6432600 4317400 5470600 8156800 10103000 5295000 8497500 9674600 12103000 9637100 6319900 9912300 45241 572 40551 379443;379444;379445;379446;379447;379448;379449;379450;379451;379452;379453;379454 299350;299351;299352;299353;299354;299355;299356;299357;299358;299359;299360 299351 11 SAIVHLINYQDDAELATR Unmodified 2028.0276 0.027618319 1010 P14923 JUP Junction plakoglobin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 76.84 77.014 3 0.00015954 88612 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 58.672 49.576 46949000 0 0 0 0 0 0 0 31023000 0 0 11344000 0 0 4583200 0 45242 1010 40552 379455;379456;379457;379458 299361;299362;299363;299364 299362 3 SAIYQLEEEYENLLK Unmodified 1840.9095 0.90946024 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 98.115 94.093 2 0.0005862 116476 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.705 63.333 15418000 0 15418000 0 0 0 0 0 0 0 0 0 0 0 0 0 45243 1029 40553 379459;379460 299365 299365 1 SALAAAQTQVAEYK Unmodified 1449.7464 0.74635808 158 O00461 GOLIM4 Golgi integral membrane protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 55.012 54.433 2 0.00036066 61869 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 93.258 67.319 80029000 0 36983000 0 3432900 4096900 3276700 5967600 5139000 6137400 5227600 5710100 0 0 4057600 0 45244 158 40554 379461;379462;379463;379464;379465;379466;379467;379468;379469;379470;379471 299366;299367;299368;299369;299370;299371;299372;299373;299374;299375;299376;299377 299373 11 SALAFLNR Unmodified 890.4974 0.49740102 4329 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.154 68.236 2 0.011841 77978 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 116.54 90.201 313100000 0 0 0 16201000 15321000 24524000 21650000 20166000 21515000 31284000 29038000 42327000 28970000 24738000 37363000 45245 4329 40555 379472;379473;379474;379475;379476;379477;379478;379479;379480;379481;379482;379483 299378;299379;299380;299381;299382 299382 0 SALALAIK Unmodified 785.50109 0.50108942 1196 P25789 PSMA4 Proteasome subunit alpha type-4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.9 3.81 6 2 12 3 3 2 1 1 1 1 1 1 1 1 1 1 1 1 61.326 59.107 1;2 0.0099306 67691 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 81.297 34.926 6135000000 3398700000 1436500000 764060000 37028000 15802000 22128000 21000000 21561000 15541000 27133000 71369000 70161000 23458000 51986000 158480000 45246 1196 40556 379484;379485;379486;379487;379488;379489;379490;379491;379492;379493;379494;379495;379496;379497;379498;379499;379500;379501;379502;379503 299383;299384;299385;299386;299387;299388;299389;299390;299391;299392;299393;299394;299395;299396;299397;299398;299399;299400;299401;299402;299403 299402 20 SALAPNLLTSGK Unmodified 1170.6608 0.66083754 286 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 64.274 64.358 2 0.025255 73321 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 53.028 31.656 35136000 0 0 0 3876500 0 5040000 0 4055000 5374400 0 5235900 8348200 3206500 0 0 45247 286 40557 379504;379505;379506;379507;379508;379509;379510 299404 299404 1 SALASVIMGLSPILGK Unmodified 1555.9008 0.90075023 1271 P30153 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes yes 0 0 0 By MS/MS 2 0 1 1 101.91 97.192 2 1.8022E-07 120070 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.65 93.59 9480700 0 9480700 0 0 0 0 0 0 0 0 0 0 0 0 0 45248 1271 40558 379511 299405 299405 1 SALASVIMGLSPILGK Oxidation (M) 1571.8957 0.89566486 1271 P30153 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes yes 0 1 0 By MS/MS 2 0 1 1 99.637 91.506 2 0.0047354 117874 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.087 43.471 6837700 6837700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45249 1271 40558 379512 299406 299406 1877 1 SALCDPPGAPGPPGPAPATHGPAPLSAQELSQEIK Acetyl (Protein N-term) 3456.6984 0.69836862 2941 Q6P9B9 INTS5 Integrator complex subunit 5 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 86.809 86.051 3 6.6426E-15 99813 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.021 41.938 40744000 0 18432000 0 0 3107100 0 0 3217800 0 4855900 0 0 0 4381900 6749100 45250 2941 40559 379513;379514;379515;379516;379517;379518 299407;299408 299408 2 SALDEIMEIEEEK Unmodified 1534.7073 0.70725496 439 O60870 KIN DNA/RNA-binding protein KIN17 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 90.582 85.17 2 5.7897E-21 107194 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 163.12 139.09 54041000 16426000 37615000 0 0 0 0 0 0 0 0 0 0 0 0 0 45251 439 40560 379519;379520;379521 299409;299410;299411;299412;299413 299409 5 SALDEIMEIEEEK Oxidation (M) 1550.7022 0.70216958 439 O60870 KIN DNA/RNA-binding protein KIN17 yes yes 0 1 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 81.769 78.469 2 0.0098956 93986 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 58.223 43.251 2962000 0 2962000 0 0 0 0 0 0 0 0 0 0 0 0 0 45252 439 40560 379522;379523 299414;299415 299414 561 2 SALDPTPK Unmodified 827.43888 0.43888309 4955 Q9UK61 FAM208A Protein FAM208A yes yes 0 0 0 By matching By MS/MS 2.67 0.471 1 2 1 2 22.769 18.655 2 0.043728 24305 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.105 25.981 20104000 358240 19745000 0 0 0 0 0 0 0 0 0 0 0 0 0 45253 4955 40561 379524;379525;379526 299416 299416 1 SALDVASEQR Unmodified 1074.5306 0.53055165 634 O95248 SBF1 Myotubularin-related protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 30.337 30.485 2 0.016645 33093 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 49.418 28.118 20251000 0 0 0 6121300 0 0 4358800 0 0 3415900 0 6355500 0 0 0 45254 634 40562 379527;379528;379529;379530 299417 299417 1 SALEEFSK Unmodified 909.44436 0.4443624 3475 Q8TAQ2 SMARCC2 SWI/SNF complex subunit SMARCC2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 40.067 38.911 2 0.0089203 43663 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 84.568 61.531 1217800000 16098000 774190000 12692000 28247000 30508000 36145000 31780000 22965000 30251000 49331000 44535000 32782000 41493000 35727000 31011000 45255 3475 40563 379531;379532;379533;379534;379535;379536;379537;379538;379539;379540;379541;379542;379543;379544;379545;379546 299418;299419;299420;299421;299422;299423;299424;299425;299426;299427;299428;299429 299418 12 SALEGSSASASQSSSEIEVPLLGSSGSSEVELPLLSSK Unmodified 3705.832 0.83200437 4733 Q9NXV6 CDKN2AIP CDKN2A-interacting protein yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 97.293 94.4 3 5.2046E-30 112777 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 67.814 66.152 15351000 0 9692100 5659300 0 0 0 0 0 0 0 0 0 0 0 0 45256 4733 40564 379547;379548 299430;299431 299430 2 SALENMLSETQSR Oxidation (M) 1480.6828 0.68277155 106 Q9C075;CON__Q9C075 KRT23 Keratin, type I cytoskeletal 23 yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 40.999 40.961 2 4.4246E-08 46135 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 99.752 80.437 + 53026000 0 0 0 20134000 3835100 2944300 3793700 8472700 2797800 0 0 0 11049000 0 0 45257 106 40565 379549;379550;379551;379552;379553;379554;379555;379556;379557 299432;299433;299434;299435;299436;299437;299438;299439;299440;299441 299440 142 9 SALENMLSETQSR Unmodified 1464.6879 0.68785692 106 Q9C075;CON__Q9C075 KRT23 Keratin, type I cytoskeletal 23 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 2 1 2 1 2 1 1 1 2 69.827 69.922 2 1.144E-06 79644 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 115.29 97.422 + 147100000 0 0 0 19479000 0 20856000 13588000 18031000 15873000 18003000 6091300 10881000 10790000 13512000 0 45258 106 40565 379558;379559;379560;379561;379562;379563;379564;379565;379566;379567;379568;379569;379570;379571 299442;299443;299444;299445;299446;299447;299448;299449 299447 6 SALEQMRK Unmodified 961.5015 0.50150012 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.972 15.142 2 0.0174 14548 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 113.5 78.299 184290000 0 0 0 9664900 9149000 11298000 13054000 10361000 7368200 15226000 22486000 18450000 17160000 20481000 29591000 45259 2392 40566 379572;379573;379574;379575;379576;379577;379578;379579;379580;379581;379582;379583 299450;299451;299452 299451 1 SALEQMRK Oxidation (M) 977.49641 0.49641475 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 1 1 By MS/MS By matching By MS/MS 2 0 3 1 1 1 6.6691 3.7049 2 0.026899 5691 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 130.04 80.449 215520000 159550000 18515000 37458000 0 0 0 0 0 0 0 0 0 0 0 0 45260 2392 40566 379584;379585;379586 299453;299454 299454 2 SALEQPETGK Unmodified 1058.5244 0.52440364 5059 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 17.789 17.977 2 0.0015449 16730 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.111 62.424 90117000 0 0 0 7148300 5842000 5170100 6315200 4199300 5966600 7661800 8573600 12004000 8282500 8011100 10943000 45261 5059 40567 379587;379588;379589;379590;379591;379592;379593;379594;379595;379596;379597;379598;379599;379600 299455;299456;299457;299458;299459;299460;299461;299462;299463;299464;299465;299466;299467;299468 299460 14 SALFAQLNQGEAITK Unmodified 1589.8413 0.8413211 1408 P40123 CAP2 Adenylyl cyclase-associated protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 76.599 76.028 2 2.0331E-50 87135 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 171.05 137.82 143600000 7561800 0 0 3574100 3868000 12026000 7423400 5163400 6604100 15827000 15018000 18556000 8434900 9820800 29718000 45262 1408 40568 379601;379602;379603;379604;379605;379606;379607;379608;379609;379610;379611;379612;379613 299469;299470;299471;299472;299473;299474;299475;299476;299477;299478;299479;299480;299481;299482 299477 14 SALFENR Unmodified 835.41882 0.41881635 3816 Q96EK9 KTI12 Protein KTI12 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 30.926 31.15 2 0.041071 33671 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 68.312 42.694 113060000 0 0 0 0 7418300 16877000 12679000 0 11767000 16735000 16088000 15759000 0 0 15732000 45263 3816 40569 379614;379615;379616;379617;379618;379619;379620;379621 299483;299484 299483 2 SALFSESQK Unmodified 995.49238 0.49237523 3897 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 32.68 32.155 2 0.0028096 34498 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 136.75 82.548 327360000 0 139220000 0 12764000 0 14828000 15835000 10345000 13469000 19583000 22183000 21165000 16837000 15008000 26126000 45264 3897 40570 379622;379623;379624;379625;379626;379627;379628;379629;379630;379631;379632;379633;379634 299485;299486;299487;299488;299489;299490;299491;299492;299493;299494;299495;299496;299497 299496 12 SALGDDINFEK Unmodified 1207.5721 0.57208211 3424 Q8NEF9 SRFBP1 Serum response factor-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 64.751 58.759 2 0.031585 75966 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.1 52.114 581060000 11464000 558630000 10973000 0 0 0 0 0 0 0 0 0 0 0 0 45265 3424 40571 379635;379636;379637 299498 299498 0 SALGPGVPHIINTK Unmodified 1402.7932 0.79324869 4303 Q9GZS1 POLR1E DNA-directed RNA polymerase I subunit RPA49 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 64.385 63.469 2;3 0.0014296 71365 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 50.102 40.314 150780000 11726000 24741000 0 0 5787400 10122000 7841900 8045100 5969400 15526000 12067000 10046000 11020000 8439400 19451000 45266 4303 40572 379638;379639;379640;379641;379642;379643;379644;379645;379646;379647;379648;379649;379650 299499;299500;299501;299502;299503;299504 299503 4 SALHSSVPK Unmodified 924.50288 0.50288033 2195 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 15.866 12.57 2 0.0057635 18648 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.29 55.508 107820000 56700000 33048000 18068000 0 0 0 0 0 0 0 0 0 0 0 0 45267 2195 40573 379651;379652;379653 299505;299506 299506 1 SALIAALCDK Unmodified 1060.5587 0.55868065 3606 Q8WZA9 IRGQ Immunity-related GTPase family Q protein yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 72.66 66.807 2 0.033939 88305 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.749 60.258 55469000 49928000 0 5540600 0 0 0 0 0 0 0 0 0 0 0 0 45268 3606 40574 379654;379655 299507;299508 299507 1 SALIPVIPITK Unmodified 1150.7325 0.73254592 2918 Q6P1L5 FAM117B Protein FAM117B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 85.545 85.597 2 0.0048314 98904 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.518 56.772 67859000 0 0 0 3529400 5822600 4911000 0 8255400 7289200 6855500 6200800 9176300 4979300 0 10840000 45269 2918 40575 379656;379657;379658;379659;379660;379661;379662;379663;379664;379665;379666 299509;299510;299511;299512;299513;299514;299515;299516;299517 299512 9 SALLALGLK Unmodified 884.5695 0.56950333 2202 Q12874 SF3A3 Splicing factor 3A subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 78.971 77.847 2 0.0042856 89525 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 87.323 53.965 1494200000 448310000 145320000 94352000 27980000 44257000 54955000 52036000 49325000 40015000 90281000 94650000 83957000 61234000 74723000 132830000 45270 2202 40576 379667;379668;379669;379670;379671;379672;379673;379674;379675;379676;379677;379678;379679;379680;379681;379682 299518;299519;299520;299521;299522;299523;299524;299525;299526;299527;299528;299529;299530;299531;299532;299533 299520 16 SALLDFYMK Oxidation (M) 1102.5369 0.53688258 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 76.409 75.276 2 0.0051302 87382 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 71.501 56.835 462020000 132590000 66369000 51653000 8727900 10941000 20747000 22677000 13682000 14502000 19119000 18631000 26395000 16302000 17893000 21792000 45271 3641 40577 379683;379684;379685;379686;379687;379688;379689;379690;379691;379692;379693;379694;379695;379696;379697;379698 299534;299535;299536;299537;299538;299539;299540;299541;299542;299543;299544;299545;299546;299547 299547 5161 13 SALLDFYMK Unmodified 1086.542 0.54196796 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 83.77 82.653 2 0.0077875 96050 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 71.501 40.428 251390000 129690000 42955000 9989600 773110 1784500 5755500 2307700 3343200 3695200 5594500 4089000 7799500 4112100 7694200 21807000 45272 3641 40577 379699;379700;379701;379702;379703;379704;379705;379706;379707;379708;379709;379710;379711;379712;379713;379714 299548;299549;299550;299551;299552;299553;299554;299555;299556;299557;299558;299559;299560;299561 299560 14 SALLPGPLELQPPR Unmodified 1486.8508 0.85076357 276 O15357 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 86.402 86.47 2 0.0014045 99743 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.676 47.457 68031000 0 0 0 1580900 3547700 6307100 4401200 5619500 4065300 6853600 5505100 7986100 7282900 5188000 9693900 45273 276 40578 379715;379716;379717;379718;379719;379720;379721;379722;379723;379724;379725;379726 299562;299563;299564;299565;299566;299567;299568;299569 299564 8 SALLTQNGTGSLPR Unmodified 1413.7576 0.75759147 3156 Q86UU1 PHLDB1 Pleckstrin homology-like domain family B member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.756 55.881 2 0.00047408 63098 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 69.451 53.197 38727000 0 0 0 2567900 1772700 2737800 3700900 3204900 2248200 4000800 4066800 4582000 2538600 2729400 4577200 45274 3156 40579 379727;379728;379729;379730;379731;379732;379733;379734;379735;379736;379737;379738 299570;299571;299572;299573;299574;299575;299576;299577;299578;299579;299580 299578 11 SALMPAQLFFK Unmodified 1251.6686 0.66856545 3422 Q8NEB9 PIK3C3 Phosphatidylinositol 3-kinase catalytic subunit type 3 yes yes 0 0 0 By MS/MS 2 0 1 1 96.785 88.654 2 0.025903 114535 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.598 56.561 9007600 9007600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45275 3422 40580 379739 299581 299581 1 SALNDVTAARK Unmodified 1144.62 0.62003536 692 O95801 TTC4 Tetratricopeptide repeat protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 25.75 25.947 3 0.034675 27962 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 22.578 14.773 59833000 0 0 0 0 2550900 7629000 4863400 0 2645900 8830400 7057100 0 7302800 7155400 11798000 45276 692 40581 379740;379741;379742;379743;379744;379745;379746;379747;379748 299582 299582 1 SALPDAAPVTK Unmodified 1068.5815 0.58152458 2857 Q68DC2 ANKS6 Ankyrin repeat and SAM domain-containing protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.456 41.634 2 0.021337 46402 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 42.338 19.447 83718000 0 0 0 5304200 6496200 5389100 8246400 7900700 4901400 7535300 10208000 8219700 7672600 4359500 7484900 45277 2857 40582 379749;379750;379751;379752;379753;379754;379755;379756;379757;379758;379759;379760 299583;299584;299585;299586 299584 4 SALPYSSFSSDQGLGESSAAPSQPITAVK Unmodified 2881.3981 0.39814707 1592 P49750 YLPM1 YLP motif-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 7 3.69 1 1 3 2 1 1 1 81.827 80.214 3 1.408E-11 92648 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 45.596 39.162 65137000 0 51194000 0 0 3539000 0 0 0 0 0 0 0 4057100 6346800 0 45278 1592 40583 379761;379762;379763;379764;379765 299587;299588;299589 299589 3 SALQALEMDRK Oxidation (M) 1276.6445 0.64453555 2475 Q15020 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.82 3.56 3 8 2 1 1 1 1 1 1 1 1 1 43.404 41.579 2;3 0.0025496 59198 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.134 40.31 403870000 243380000 32340000 0 13303000 0 11844000 14980000 10533000 12276000 0 20229000 0 0 21938000 23051000 45279 2475 40584 379766;379767;379768;379769;379770;379771;379772;379773;379774;379775;379776 299590;299591;299592;299593;299594;299595;299596 299593 4079 5 SALQALEMDRK Unmodified 1260.6496 0.64962092 2475 Q15020 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 59.271 52.721 2;3 7.2183E-18 71742 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 176.6 111.94 223210000 166800000 49462000 6948500 0 0 0 0 0 0 0 0 0 0 0 0 45280 2475 40584 379777;379778;379779;379780 299597;299598;299599;299600;299601;299602 299599 6 SALQELEELK Unmodified 1158.6132 0.61321864 1273 P30260 CDC27 Cell division cycle protein 27 homolog yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 77.983 77.329 2 6.1996E-06 96634 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.36 85.763 553300000 0 191050000 28777000 7646100 14625000 24122000 21094000 22206000 16843000 36506000 26828000 26844000 28703000 31953000 76097000 45281 1273 40585 379781;379782;379783;379784;379785;379786;379787;379788;379789;379790;379791;379792;379793;379794;379795 299603;299604;299605;299606;299607;299608;299609;299610 299604 4 SALQVEQK Unmodified 901.4869 0.48689592 298 O43150 ASAP2 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 20.344 16.602 2 0.024519 22098 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.191 37.421 10515000 0 10515000 0 0 0 0 0 0 0 0 0 0 0 0 0 45282 298 40586 379796;379797 299611 299611 1 SALSGHLETVILGLLK Unmodified 1649.9716 0.97160699 840 P07355;A6NMY6 ANXA2;ANXA2P2 Annexin A2;Putative annexin A2-like protein yes no 0 0 0 By MS/MS 3 0 1 1 99.362 95.963 3 0.00038411 115106 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 66.059 61.755 14292000 0 14292000 0 0 0 0 0 0 0 0 0 0 0 0 0 45283 840 40587 379798 299612 299612 1 SALSSELSLVGDTTGDTLEK Unmodified 2022.0005 0.0004600951 3662 Q92793 CREBBP CREB-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 83.78 83.934 2 2.6793E-87 96881 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 214.18 162.34 49589000 0 0 0 0 0 0 0 3526300 0 10596000 6903200 7667600 0 5446600 15450000 45284 3662 40588 379799;379800;379801;379802;379803;379804 299613;299614;299615;299616;299617;299618 299614 6 SALSTVSFYNQNK Unmodified 1457.7151 0.71505795 2713 Q56NI9 ESCO2 N-acetyltransferase ESCO2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 61.861 62.172 2 7.8882E-06 71085 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 94.692 78.021 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45285 2713 40589 379805;379806 299619;299620 299619 2 SALTLQFMYDEFVEDYEPTK Unmodified 2425.1035 0.10354496 940;941 P11233;P11234 RALA;RALB Ras-related protein Ral-A;Ras-related protein Ral-B no no 0 0 0 By MS/MS 2 0 1 1 100.09 91.962 2 3.6045E-29 118505 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 146 139.27 11956000 11956000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45286 940;941 40590 379807 299621 299621 1 SALVQIYELEEHK Unmodified 1557.8039 0.80387296 1742 P54619 PRKAG1 5'-AMP-activated protein kinase subunit gamma-1 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 76.96 76.22 3 1.2209E-13 98419 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 100.22 92.247 119100000 66541000 0 0 1258800 0 6625100 2697600 5704800 4675200 5516100 0 7861100 0 4909000 13307000 45287 1742 40591 379808;379809;379810;379811;379812;379813;379814;379815;379816;379817 299622;299623 299623 2 SAMMYIQELR 2 Oxidation (M) 1272.5842 0.58424348 417 O60610 DIAPH1 Protein diaphanous homolog 1 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 58.593 58.74 2 0.0094368 66795 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 43.442 15.043 33878000 0 0 0 0 5014800 5403300 0 4611600 0 6292300 5377800 0 0 3271600 3906800 45288 417 40592 379818;379819;379820;379821;379822;379823;379824 299624 299624 525;526 1 SAMMYIQELR Oxidation (M) 1256.5893 0.58932885 417 O60610 DIAPH1 Protein diaphanous homolog 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 64.596 64.73 2 0.0070399 73984 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 55.567 36.791 29250000 0 0 0 0 2792700 0 2781800 3848600 0 3912700 3734500 5604300 2746000 3829500 0 45289 417 40592 379825;379826;379827;379828;379829;379830;379831;379832 299625;299626;299627;299628;299629;299630;299631;299632 299626 525;526 8 SAMPFTASPASSTTAR Oxidation (M) 1597.7406 0.74062078 119 O00151 PDLIM1 PDZ and LIM domain protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 40.171 40.412 2 1.9508E-19 43844 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 106.26 91.584 194770000 0 0 0 0 8578000 8254700 14551000 10175000 6406600 19090000 26363000 36878000 10758000 18729000 34988000 45290 119 40593 379833;379834;379835;379836;379837;379838;379839;379840;379841;379842;379843 299633;299634;299635;299636;299637;299638;299639;299640;299641;299642;299643 299640 155 11 SAMPFTASPASSTTAR Unmodified 1581.7457 0.74570615 119 O00151 PDLIM1 PDZ and LIM domain protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.446 55.575 2 8.2137E-08 63001 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 108.72 81.618 288620000 0 0 0 8383100 9353200 10252000 11540000 11268000 6720700 14212000 44148000 48779000 10568000 34646000 78748000 45291 119 40593 379844;379845;379846;379847;379848;379849;379850;379851;379852;379853;379854;379855 299644;299645;299646;299647;299648;299649;299650;299651 299649 7 SAMQSVVDDWIESYK Oxidation (M) 1772.7927 0.79271593 3326;3563 Q8N3U4;Q8WVM7 STAG2;STAG1 Cohesin subunit SA-2;Cohesin subunit SA-1 no no 0 1 0 By MS/MS 2 0 1 1 88.483 83.641 2 1.4788E-22 103959 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.01 99.347 34939000 0 34939000 0 0 0 0 0 0 0 0 0 0 0 0 0 45292 3326;3563 40594 379856 299652;299653 299652 4922 2 SAMQSVVDDWIESYK Unmodified 1756.7978 0.7978013 3326;3563 Q8N3U4;Q8WVM7 STAG2;STAG1 Cohesin subunit SA-2;Cohesin subunit SA-1 no no 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 96.186 91.053 2 7.5741E-23 114200 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.21 104.96 63165000 8580600 54126000 459190 0 0 0 0 0 0 0 0 0 0 0 0 45293 3326;3563 40594 379857;379858;379859 299654;299655 299654 2 SANAEDAQEFSDVER Unmodified 1666.7071 0.70707204 4523 Q9HCY8 S100A14 Protein S100-A14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 44.69 44.953 2 3.6893E-49 49944 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 165.58 143.56 122840000 0 0 0 33875000 0 9163100 0 14443000 0 12618000 8602400 14170000 12769000 8519500 8675600 45294 4523 40595 379860;379861;379862;379863;379864;379865;379866;379867;379868;379869;379870 299656;299657;299658;299659;299660;299661;299662;299663;299664;299665;299666;299667 299664 12 SANAFLTPSYTWTPLK Unmodified 1795.9145 0.91448604 2529 Q15398 DLGAP5 Disks large-associated protein 5 yes yes 0 0 0 By MS/MS 10 0 1 1 88.028 88.178 2 0.0035445 102026 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.616 38.383 2271900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2271900 45295 2529 40596 379871 299668 299668 1 SANDGIVAEYLK Unmodified 1278.6456 0.6455814 392 O60293 ZFC3H1 Zinc finger C3H1 domain-containing protein yes yes 0 0 0 By MS/MS 2 0 1 1 78.67 73.934 2 0.017277 92139 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 57.174 34.533 23773000 0 23773000 0 0 0 0 0 0 0 0 0 0 0 0 0 45296 392 40597 379872 299669 299669 1 SANFREHIQR Unmodified 1256.6374 0.63741675 5215 Q9Y508 RNF114 E3 ubiquitin-protein ligase RNF114 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 17.925 18.129 3 0.020373 16605 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 34.755 17.812 37623000 0 0 0 1907200 1616600 2769800 0 0 3260900 2730000 5952200 7460000 0 4757800 7168000 45297 5215 40598 379873;379874;379875;379876;379877;379878;379879;379880;379881 299670;299671;299672;299673 299672 4 SANILLDEAFTAK Unmodified 1391.7296 0.72964538 4709 Q9NWZ3 IRAK4 Interleukin-1 receptor-associated kinase 4 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 86.505 82.868 2 0.014632 103030 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 55.452 23.581 91363000 0 89591000 1772100 0 0 0 0 0 0 0 0 0 0 0 0 45298 4709 40599 379882;379883 299674 299674 1 SANPPHTIQASEEQSSTPAPVK Unmodified 2275.1081 0.10805348 5184 Q9Y450 HBS1L HBS1-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 40.526 39.752 3 3.5753E-91 50770 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.29 130.64 406340000 0 187180000 4482700 10179000 8108800 25003000 11825000 11901000 12317000 25319000 20169000 24755000 17450000 14806000 32846000 45299 5184 40600 379884;379885;379886;379887;379888;379889;379890;379891;379892;379893;379894;379895;379896;379897;379898 299675;299676;299677;299678;299679;299680;299681;299682;299683;299684;299685;299686;299687;299688;299689;299690;299691 299678 17 SANSELGGIWSVGQR Unmodified 1559.7692 0.76921879 4040 Q99627 COPS8 COP9 signalosome complex subunit 8 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.326 76.374 2 1.3961E-09 87323 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 115.57 105.62 129330000 0 0 0 3602700 5670600 12282000 6180300 8256200 0 14752000 15959000 13288000 9654400 12820000 26866000 45300 4040 40601 379899;379900;379901;379902;379903;379904;379905;379906;379907;379908;379909 299692;299693;299694;299695;299696;299697;299698;299699 299696 6 SANSVLIK Unmodified 830.48617 0.48616764 3453 Q8NG31 CASC5 Protein CASC5 yes yes 0 0 0 By MS/MS 2 0 1 1 32.987 28.453 2 0.0365 37039 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.138 37.951 16491000 0 16491000 0 0 0 0 0 0 0 0 0 0 0 0 0 45301 3453 40602 379910 299700 299700 1 SANTEPYYR Unmodified 1099.4934 0.49343786 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 23.599 23.801 2 0.011979 24913 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 61.999 44.759 22746000 0 0 0 1858400 2658200 0 0 1961200 1479300 2611900 0 3388400 0 3083300 5705300 45302 5189 40603 379911;379912;379913;379914;379915;379916;379917;379918 299701;299702;299703;299704;299705 299701 5 SANTQVVR Unmodified 873.46683 0.46682918 2146 Q07960 ARHGAP1 Rho GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 8.9668 9.0666 2 0.0099306 7530 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 81.297 38.297 19056000 0 0 0 2125600 853330 3772300 3159400 2016700 0 0 0 1902000 1861100 608190 2757000 45303 2146 40604 379919;379920;379921;379922;379923;379924;379925;379926;379927 299706;299707;299708;299709 299709 4 SANVNEFPVLK Unmodified 1216.6452 0.64518747 1754 P55060 CSE1L Exportin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 4 2 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 69.155 67.799 2 1.8252E-06 86986 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.73 95.996 5112600000 112680000 3722900000 45781000 75209000 41002000 191580000 72680000 52979000 38768000 137020000 114370000 113330000 70431000 103380000 220520000 45304 1754 40605 379928;379929;379930;379931;379932;379933;379934;379935;379936;379937;379938;379939;379940;379941;379942;379943;379944;379945 299710;299711;299712;299713;299714;299715;299716;299717;299718;299719;299720;299721;299722;299723;299724;299725;299726;299727 299715 14 SANVSSIWHR Unmodified 1155.5785 0.57850489 5068 Q9UQ84 EXO1 Exonuclease 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 45.443 45.622 3 0.028802 50048 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.77 35.845 106720000 0 0 0 5457000 6557800 6835400 0 9289200 6099400 9357500 14495000 15185000 8382500 7538100 17521000 45305 5068 40606 379946;379947;379948;379949;379950;379951;379952;379953;379954;379955;379956 299728 299728 0 SAPAGASEPPPPGGVGLGIR Unmodified 1785.9373 0.93734675 3250 Q8IWZ3 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.16 66.245 2 1.175E-09 75770 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 105.17 90.027 166000000 0 0 0 8012900 8261200 12052000 11450000 11345000 9314800 14816000 18056000 21190000 17791000 13680000 20032000 45306 3250 40607 379957;379958;379959;379960;379961;379962;379963;379964;379965;379966;379967;379968 299729;299730;299731;299732;299733;299734;299735;299736;299737;299738 299730 10 SAPAGSSHPAASAR Acetyl (Protein N-term) 1307.6218 0.62182627 666 O95487 SEC24B Protein transport protein Sec24B yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 14.463 14.598 2 0.00013585 13444 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.958 55.094 56448000 0 0 0 3657500 3436700 5307100 3766600 5091600 0 7548400 6217000 0 6497300 4694900 10230000 45307 666 40608 379969;379970;379971;379972;379973;379974;379975;379976;379977;379978 299739;299740;299741;299742;299743;299744;299745;299746;299747;299748 299742 10 SAPALACGNAMVFK Oxidation (M) 1451.6901 0.69010553 1561 P49189 ALDH9A1 4-trimethylaminobutyraldehyde dehydrogenase yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 63.948 58.606 2 0.014324 75196 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 49.5 38.552 53778000 0 53778000 0 0 0 0 0 0 0 0 0 0 0 0 0 45308 1561 40609 379979;379980 299749 299749 2476 1 SAPAMQSSGSFNYARPK Oxidation (M) 1813.8417 0.8417318 3581 Q8WX93 PALLD Palladin yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 33.507 33.685 3 4.7507E-29 37005 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 115.8 109.18 284170000 0 0 0 21040000 20815000 21269000 31244000 22155000 0 27151000 34177000 42467000 29329000 0 34524000 45309 3581 40610 379981;379982;379983;379984;379985;379986;379987;379988;379989;379990 299750;299751;299752;299753;299754;299755;299756;299757;299758;299759 299751 5081 10 SAPAMQSSGSFNYARPK Unmodified 1797.8468 0.84681718 3581 Q8WX93 PALLD Palladin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 2 1 1 43.969 44.191 2;3 3.1602E-14 48310 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.666 88.489 238800000 0 0 0 13009000 0 26463000 16188000 18368000 0 26438000 0 24304000 25126000 24280000 64626000 45310 3581 40610 379991;379992;379993;379994;379995;379996;379997;379998;379999;380000 299760;299761;299762;299763;299764;299765;299766;299767;299768 299763 7 SAPASPNHAGVLSAHSSGAQTPESLSR Unmodified 2615.2688 0.26880466 2051 Q01167 FOXK2 Forkhead box protein K2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 43.84 43.875 3;4 9.7703E-36 48187 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.185 82.029 135650000 0 0 0 16246000 8576200 18225000 15304000 10843000 22558000 20213000 0 0 0 0 23688000 45311 2051 40611 380001;380002;380003;380004;380005;380006;380007;380008;380009 299769;299770;299771;299772;299773;299774;299775;299776 299773 8 SAPASPTHPGLMSPR Oxidation (M) 1520.7406 0.7405612 2019 P85037 FOXK1 Forkhead box protein K1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 2 2 2 2 2 29.968 30.403 2;3 5.5899E-05 32717 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 69.729 61.753 206090000 0 0 0 0 0 31202000 0 0 0 37447000 29887000 54848000 0 0 52704000 45312 2019 40612 380010;380011;380012;380013;380014;380015;380016;380017;380018;380019 299777;299778;299779;299780;299781 299780 3272 5 SAPASPTHPGLMSPR Unmodified 1504.7456 0.74564657 2019 P85037 FOXK1 Forkhead box protein K1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 38.446 38.743 3 0.00033004 42883 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 69.594 65.181 43999000 0 0 0 0 0 20401000 0 0 10170000 0 0 0 0 0 13428000 45313 2019 40612 380020;380021;380022 299782;299783 299782 1 SAPDQEVRILLLGLDNAGK Unmodified 2008.0953 0.095303954 1371 P36405 ARL3 ADP-ribosylation factor-like protein 3 yes yes 0 0 1 By MS/MS 2 0 1 1 97.633 89.502 3 0.020645 115602 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 30.094 20.533 10289000 10289000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45314 1371 40613 380023 299784 299784 1 SAPDRQEEISK Unmodified 1258.6153 0.61534391 4977 Q9UKV8 AGO2 Protein argonaute-2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 2 2 1 2 2 2 1 2 2 2 1 25.047 25.207 3 0.0026881 28921 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 73.781 29.578 361050000 0 0 0 64040000 24547000 2016000 27819000 73696000 21352000 7074100 0 53269000 46497000 25747000 14997000 45315 4977 40614 380024;380025;380026;380027;380028;380029;380030;380031;380032;380033;380034;380035;380036;380037;380038;380039;380040;380041;380042 299785;299786;299787;299788;299789;299790 299790 2 SAPDTELVNVTHLNTEVK Unmodified 1966.0007 0.0007348666 4752 Q9NYV4 CDK12 Cyclin-dependent kinase 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 74.359 73.833 3 3.8231E-06 84996 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 75.97 59.219 712820000 0 272680000 0 19757000 27068000 33152000 27113000 24649000 27706000 55167000 50756000 44993000 31606000 34639000 63528000 45316 4752 40615 380043;380044;380045;380046;380047;380048;380049;380050;380051;380052;380053;380054;380055;380056 299791;299792;299793;299794;299795;299796;299797;299798;299799;299800;299801;299802 299799 8 SAPINSDSQGR Unmodified 1130.5316 0.53161428 1978 P78356 PIP4K2B Phosphatidylinositol 5-phosphate 4-kinase type-2 beta yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 10.072 10.353 2 0.030589 8231 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.567 28.979 2577300 0 0 0 0 0 0 0 0 0 0 0 0 1093300 0 1484000 45317 1978 40616 380057;380058 299803 299803 1 SAPLDAALHALQEEQARLK Acetyl (Protein N-term) 2102.112 0.11201665 1991 P80217 IFI35 Interferon-induced 35 kDa protein yes yes 1 0 1 By MS/MS 2 0 2 2 99.89 95.177 3 1.0488E-68 118150 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 150.91 141.98 70911000 0 70911000 0 0 0 0 0 0 0 0 0 0 0 0 0 45318 1991 40617 380059;380060 299804;299805 299805 2 SAPLEIGLQR Unmodified 1082.6084 0.60840804 2916 Q6P1J9 CDC73 Parafibromin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.311 62.408 2 0.0015498 71435 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 93.162 74.723 848740000 0 0 0 40565000 39256000 48772000 51334000 47245000 33096000 72297000 92430000 125960000 91994000 87045000 118750000 45319 2916 40618 380061;380062;380063;380064;380065;380066;380067;380068;380069;380070;380071;380072 299806;299807;299808;299809;299810;299811;299812;299813;299814;299815;299816;299817 299807 11 SAPPLNLTGLPGTEK Unmodified 1493.809 0.80895834 507 O75478 TADA2A Transcriptional adapter 2-alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 77.792 77.742 2 0.004343 89844 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 43.502 19.779 62477000 0 0 0 4675600 6212100 6855700 0 0 0 8034100 11459000 25241000 0 0 0 45320 507 40619 380073;380074;380075;380076;380077;380078 299818;299819;299820;299821 299821 4 SAPPQLPSFYK Unmodified 1233.6394 0.63937381 3199 Q86XP3 DDX42 ATP-dependent RNA helicase DDX42 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 73.124 71.945 2 0.013486 90543 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.645 76.332 386770000 23642000 247870000 0 10008000 10895000 12270000 12421000 10637000 9265200 14855000 0 20273000 14635000 0 0 45321 3199 40620 380079;380080;380081;380082;380083;380084;380085;380086;380087;380088;380089 299822;299823;299824;299825;299826;299827;299828;299829;299830 299825 7 SAPPTRGPPPSYGGSSR Unmodified 1669.8172 0.81723161 1395 P38159 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 24.077 24.224 3 0.0049965 25070 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 37.083 18.025 103050000 0 0 0 7922100 5807700 8833800 8948400 8393600 9342900 11509000 17003000 15819000 9473800 0 0 45322 1395 40621 380090;380091;380092;380093;380094;380095;380096;380097;380098;380099 299831;299832;299833;299834;299835;299836 299831 1 SAPSGQNGVGSLSGQADGSSGGATGTTASGTGR Unmodified 2836.2819 0.28194812 3227 Q8IVH2 FOXP4 Forkhead box protein P4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 39.67 39.911 3 2.0975E-49 44385 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 78.159 70.883 77171000 0 0 0 0 3740500 9257900 5223800 6461400 5470200 7280100 8147300 12023000 7577500 5424600 6564500 45323 3227 40622 380100;380101;380102;380103;380104;380105;380106;380107;380108;380109;380110 299837;299838;299839;299840;299841;299842;299843;299844;299845;299846;299847 299838 11 SAPSMPSQGLAK Oxidation (M) 1188.5809 0.58087266 3134 Q86TC9 MYPN Myopalladin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 20.276 20.517 2 0.00061957 21350 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 72.325 35.134 296680000 0 0 0 0 21004000 30960000 35566000 21080000 24241000 0 35309000 31396000 41166000 31072000 24889000 45324 3134 40623 380111;380112;380113;380114;380115;380116;380117;380118;380119;380120 299848;299849;299850;299851;299852;299853;299854;299855;299856;299857 299848 4758 10 SAPSRPQQAGYEAPVLFR Unmodified 1973.0119 0.011908675 4649 Q9NUP1 BLOC1S4 Biogenesis of lysosome-related organelles complex 1 subunit 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 67.372 67.627 3 0.020795 76871 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 15.481 5.823 32153000 0 0 0 0 0 7152900 0 0 0 4400600 0 8869700 0 0 11730000 45325 4649 40624 380121;380122;380123;380124 299858;299859 299858 2 SAPSSSDSATRDPSTSVPASGAHQPPQTTEGEK Unmodified 3266.4923 0.49233482 5051 Q9UPN7 PPP6R1 Serine/threonine-protein phosphatase 6 regulatory subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 32.876 33.066 4 6.3674E-38 36203 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 64.914 47.556 159610000 0 0 0 0 10033000 15888000 16043000 14066000 7719300 15393000 20120000 25470000 18361000 16517000 0 45326 5051 40625 380125;380126;380127;380128;380129;380130;380131;380132;380133;380134 299860;299861;299862;299863;299864;299865;299866;299867;299868;299869;299870;299871 299861 12 SAPVMLTLSDSK Unmodified 1247.6431 0.64313856 2514 Q15291 RBBP5 Retinoblastoma-binding protein 5 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 72.429 67.394 2 0.016936 85474 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.066 50.832 335340000 0 335340000 0 0 0 0 0 0 0 0 0 0 0 0 0 45327 2514 40626 380135;380136 299872 299872 1 SAPVMLTLSDSK Oxidation (M) 1263.6381 0.63805318 2514 Q15291 RBBP5 Retinoblastoma-binding protein 5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 7.67 3.3 1 2 1 1 1 58.204 55.544 2 0.0060636 63764 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 48.004 28.217 11591000 0 3785000 0 0 7806200 0 0 0 0 0 0 0 0 0 0 45328 2514 40626 380137;380138;380139 299873;299874;299875 299875 4135 3 SAPVSTTETEDK Unmodified 1263.583 0.58304073 3970 Q96RL7 VPS13A Vacuolar protein sorting-associated protein 13A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.075 15.246 2 2.7539E-05 13835 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 96.171 67.475 90505000 0 0 0 4122000 3237800 6332200 4994200 5338100 6578500 8026400 10114000 13392000 11947000 8647000 7776400 45329 3970 40627 380140;380141;380142;380143;380144;380145;380146;380147;380148;380149;380150;380151 299876;299877;299878;299879;299880;299881;299882;299883;299884;299885;299886 299882 11 SAQAQMR Acetyl (Protein N-term) 832.38614 0.38613602 5141;4557 Q9Y383;Q9NQ29 LUC7L2;LUC7L Putative RNA-binding protein Luc7-like 2;Putative RNA-binding protein Luc7-like 1 no no 1 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 15.928 16.206 2 0.0075537 14754 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 87.582 52.877 86379000 0 0 0 0 0 7344000 0 7998300 5788400 9199700 13444000 15589000 0 10911000 16104000 45330 5141;4557 40628 380152;380153;380154;380155;380156;380157;380158;380159 299887;299888;299889;299890;299891;299892;299893 299892 7 SAQASHSADTRPAGAEK Unmodified 1682.7972 0.79722445 2763 Q5SXM2 SNAPC4 snRNA-activating protein complex subunit 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 5.892 6.0094 3 1.3562E-60 4026 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 167.28 151.89 151300000 0 0 0 11629000 9794500 8550500 10559000 7630300 9120800 14817000 17467000 16564000 15174000 14607000 15389000 45331 2763 40629 380160;380161;380162;380163;380164;380165;380166;380167;380168;380169;380170;380171 299894;299895;299896;299897;299898;299899;299900;299901;299902;299903;299904;299905 299903 12 SAQEFAVDPEK Unmodified 1219.5721 0.57208211 2649 Q2KHR3 QSER1 Glutamine and serine-rich protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 42.684 42.419 2 0.0062804 47470 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 66.595 54.827 97334000 0 22866000 0 3774600 4373600 5902900 4892800 5522300 4121900 7449500 8159600 7005200 6831100 6318900 10116000 45332 2649 40630 380172;380173;380174;380175;380176;380177;380178;380179;380180;380181;380182;380183;380184 299906;299907;299908;299909;299910;299911;299912;299913 299908 8 SAQERSQAEEEIDEIRK Unmodified 2016.9712 0.97122565 2768 Q5T1M5 FKBP15 FK506-binding protein 15 yes yes 0 0 2 By MS/MS By MS/MS 2 0 4 2 2 49.049 43.158 3;4 1.0828E-06 54630 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 85.636 79.926 90695000 52129000 0 38567000 0 0 0 0 0 0 0 0 0 0 0 0 45333 2768 40631 380185;380186;380187;380188 299914;299915;299916;299917 299917 4 SAQGSSSPVPSMVQK Unmodified 1488.7242 0.72424243 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.054 42.231 2 6.2544E-23 46495 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 120.87 96.842 313600000 0 0 0 17069000 16573000 17673000 17276000 29272000 18727000 24674000 30612000 34820000 27696000 30856000 48345000 45334 1364 40632 380189;380190;380191;380192;380193;380194;380195;380196;380197;380198;380199;380200 299918;299919;299920;299921;299922;299923;299924;299925;299926;299927;299928;299929;299930 299928 13 SAQGSSSPVPSMVQK Oxidation (M) 1504.7192 0.71915705 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 2 2 2 1 1 2 2 2 2 2 2 26.831 27.026 2 8.4095E-19 28950 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 105.17 80.827 188220000 0 0 0 11687000 16051000 14242000 8789900 9965400 20511000 17905000 20657000 27745000 0 20302000 20371000 45335 1364 40632 380201;380202;380203;380204;380205;380206;380207;380208;380209;380210;380211;380212;380213;380214;380215;380216;380217;380218;380219;380220 299931;299932;299933;299934;299935;299936 299934 2120 5 SAQIADLQQK Unmodified 1100.5826 0.58258722 632 O95239;Q2VIQ3 KIF4A;KIF4B Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 31.36 31.664 2 0.0008873 34271 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 117.89 85.748 124620000 0 0 0 0 0 9548600 10587000 10891000 7291500 9725300 15457000 18527000 10826000 14704000 17064000 45336 632 40633 380221;380222;380223;380224;380225;380226;380227;380228;380229;380230 299937;299938;299939;299940;299941;299942;299943;299944;299945;299946 299942 10 SAQMIVETEK Oxidation (M) 1150.554 0.5539892 2833 Q5VZK9 LRRC16A Leucine-rich repeat-containing protein 16A yes yes 0 1 0 By MS/MS 2 0 1 1 27.272 23.012 2 0.011528 30089 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.908 17.134 25859000 0 25859000 0 0 0 0 0 0 0 0 0 0 0 0 0 45337 2833 40634 380231 299947 299947 4496 1 SAQMLEEAR Oxidation (M) 1049.4812 0.48115861 3217 Q8IUD2 ERC1 ELKS/Rab6-interacting/CAST family member 1 yes yes 0 1 0 By MS/MS By matching By matching 10 0 3 1 1 1 15.967 16.207 2 0.015429 16487 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 51.066 22.848 6347600 0 0 0 0 0 0 1815500 0 0 0 0 0 0 1740800 2791300 45338 3217 40635 380232;380233;380234 299948 299948 4836 1 SAQMLEEAR Unmodified 1033.4862 0.48624399 3217 Q8IUD2 ERC1 ELKS/Rab6-interacting/CAST family member 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 28.136 28.381 2 0.032701 30573 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 67.897 34.255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45339 3217 40635 380235;380236 299949;299950 299949 2 SAQNLPGGGPASHSNPR Unmodified 1645.7921 0.7920795 4253 Q9BYV8 CEP41 Centrosomal protein of 41 kDa yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 21.46 21.704 3 0.00016649 22080 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 64.298 53.028 49984000 0 0 0 0 2852700 11367000 6157800 0 2594600 0 10655000 4259300 0 2783900 9313900 45340 4253 40636 380237;380238;380239;380240;380241;380242;380243;380244;380245 299951;299952;299953;299954;299955 299955 5 SAQPASAEPR Unmodified 1012.4938 0.49377221 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 8.6681 8.8015 2 0.00092213 7270 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 113.62 69.814 145100000 0 0 0 9071800 5315600 12404000 8289800 5751300 5290700 12881000 27706000 17800000 10683000 7474800 22432000 45341 5187 40637 380246;380247;380248;380249;380250;380251;380252;380253;380254;380255;380256;380257 299956;299957;299958;299959;299960;299961;299962;299963 299961 6 SAQPPGNSQNIK Unmodified 1239.6208 0.62076364 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 14.392 14.585 2 0.0033909 13380 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.518 26.132 48179000 0 0 0 0 2148400 2743100 3034200 0 1844000 4793600 7563400 8598900 4353400 5321700 7778700 45342 645 40638 380258;380259;380260;380261;380262;380263;380264;380265;380266;380267 299964;299965;299966;299967;299968;299969;299970 299966 7 SAQQEASADVATPK Unmodified 1401.6736 0.67358707 3601 Q8WYP5 AHCTF1 Protein ELYS yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 24.808 25.037 2 6.3513E-19 26072 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 129.89 87.698 51872000 0 0 0 0 3341100 3757400 5510800 5158300 3706100 6748800 4003700 5376200 0 4425500 9843900 45343 3601 40639 380268;380269;380270;380271;380272;380273;380274;380275;380276;380277;380278 299971;299972;299973;299974;299975;299976;299977;299978;299979;299980;299981 299979 11 SAQQGSDGLHFVR Unmodified 1400.6797 0.6796755 321 O43379 WDR62 WD repeat-containing protein 62 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 39.801 40.038 3 0.006158 43229 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.006 26.429 36102000 0 0 0 4014000 0 6043800 0 5472500 0 0 0 9383900 0 0 11187000 45344 321 40640 380279;380280;380281;380282;380283 299982;299983;299984 299982 3 SAQSVEEDSILIIPTPDEEEK Acetyl (Protein N-term) 2370.1326 0.13259648 1045 P17028 ZNF24 Zinc finger protein 24 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.2 3.6 1 4 1 1 1 1 1 94.237 94.466 2;3 0.00024172 96963 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 55.453 51.102 17434000 0 10302000 0 0 1466600 0 0 0 0 2617500 1612800 1435300 0 0 0 45345 1045 40641 380284;380285;380286;380287;380288 299985;299986;299987 299985 3 SAQVAQSLLK Unmodified 1043.5975 0.597509 4641 Q9NU22 MDN1 Midasin yes yes 0 0 0 By MS/MS 10 0 1 1 47.599 47.656 2 0.039384 53739 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 40.244 20.106 4360500 0 0 0 0 0 4360500 0 0 0 0 0 0 0 0 0 45346 4641 40642 380289 299988 299988 1 SAQWAINR Unmodified 944.48281 0.48281359 904 P0CW18 PRSS56 Serine protease 56 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.227 38.406 2 0.0044555 42802 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 110.61 72.374 230810000 0 0 0 13205000 13646000 15139000 18342000 18544000 15348000 21133000 20920000 22364000 19094000 27790000 25281000 45347 904 40643 380290;380291;380292;380293;380294;380295;380296;380297;380298;380299;380300;380301 299989;299990;299991;299992;299993;299994;299995;299996;299997;299998;299999;300000;300001 299989 11 SARDHAISLSEPR Unmodified 1437.7324 0.73243935 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 30.112 30.354 3 1.8766E-05 32852 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 72.321 48.96 164290000 0 0 0 10727000 0 9269500 11671000 12949000 13582000 12646000 14060000 20559000 20613000 19626000 18587000 45348 5216 40644 380302;380303;380304;380305;380306;380307;380308;380309;380310;380311;380312 300002;300003;300004;300005;300006;300007;300008;300009;300010;300011;300012;300013;300014 300011 13 SARIETSCSLLEQTQPATPSLWK Unmodified 2602.3061 0.30610137 448 O60934 NBN Nibrin yes yes 0 0 1 By MS/MS 2 0 1 1 86.021 77.891 3 1.6487E-07 101531 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.388 46.373 36794000 36794000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45349 448 40645 380313 300015 300015 1 SASAAQRELVAQGK Unmodified 1414.7528 0.75284044 5201 Q9Y4G6 TLN2 Talin-2 yes yes 0 0 1 By MS/MS By matching By MS/MS 2 0 5 2 1 2 27.445 23.174 2;3 3.7013E-05 32506 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 103.43 81.684 149350000 111170000 14734000 23453000 0 0 0 0 0 0 0 0 0 0 0 0 45350 5201 40646 380314;380315;380316;380317;380318 300016;300017 300016 1 SASAPAAEGEGTPTQPASEK Acetyl (Protein N-term) 1926.8807 0.88067931 1365 P35659 DEK Protein DEK yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.69 3.07 2 2 22 3 1 1 1 2 2 2 2 2 2 2 2 2 2 39.696 40.689 2;3 1.19E-174 41281 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 208.68 194.87 1349800000 51032000 11168000 0 67054000 85610000 86495000 87462000 85547000 83409000 119300000 178330000 153080000 116430000 86604000 138320000 45351 1365 40647 380319;380320;380321;380322;380323;380324;380325;380326;380327;380328;380329;380330;380331;380332;380333;380334;380335;380336;380337;380338;380339;380340;380341;380342;380343;380344 300018;300019;300020;300021;300022;300023;300024;300025;300026;300027;300028;300029;300030;300031;300032;300033;300034;300035;300036;300037;300038;300039;300040;300041;300042 300035 22 SASAQQLAEELQIFGLDCEEALIEK Acetyl (Protein N-term) 2833.3692 0.36915513 2385 Q14181 POLA2 DNA polymerase alpha subunit B yes yes 1 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 102.65 98.508 3 0.00017512 121349 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 43.658 41.218 51902000 0 51902000 0 0 0 0 0 0 0 0 0 0 0 0 0 45352 2385 40648 380345;380346;380347 300043;300044 300043 2 SASAVYVLDLK Acetyl (Protein N-term) 1206.6496 0.64960415 4232 Q9BXS5 AP1M1 AP-1 complex subunit mu-1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 6 4.02 1 3 1 5 2 2 1 1 1 1 1 1 90.712 89.43 2 2.2587E-05 103625 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 112.75 91.847 245380000 121070000 109610000 1655100 0 0 1599900 0 0 0 3774200 3405500 1985700 0 2277100 0 45353 4232 40649 380348;380349;380350;380351;380352;380353;380354;380355;380356;380357 300045;300046;300047;300048;300049;300050;300051 300047 6 SASDLSEDLFK Unmodified 1210.5717 0.57174776 3618 Q92541 RTF1 RNA polymerase-associated protein RTF1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.27 3.62 2 2 7 2 2 1 1 1 1 1 1 1 72.515 70.551 2 0.00020878 81535 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 128.86 100.64 602300000 26827000 510640000 0 6781100 5081600 0 11221000 0 7112200 17980000 0 0 16660000 0 0 45354 3618 40650 380358;380359;380360;380361;380362;380363;380364;380365;380366;380367;380368 300052;300053;300054;300055;300056;300057;300058;300059;300060;300061 300059 9 SASDLTWDNLK Unmodified 1248.5986 0.59863121 763 P02787 TF Serotransferrin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 65.656 65.531 2 1.9751E-05 74981 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 128.86 96.537 26086000 0 0 0 7186000 0 0 0 15925000 0 2975200 0 0 0 0 0 45355 763 40651 380369;380370;380371 300062;300063;300064 300063 3 SASEEQALSQDGSGEK Unmodified 1621.7067 0.70673769 2755 Q5SQI0 ATAT1 Alpha-tubulin N-acetyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 22.587 22.676 2 0.0067958 23300 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 69.451 52.819 19298000 0 0 0 1831100 1569700 1702400 1998700 2250800 1812800 2230500 3266100 0 0 2635800 0 45356 2755 40652 380372;380373;380374;380375;380376;380377;380378;380379;380380;380381 300065;300066 300066 2 SASELTAGAEAEAEEVK Unmodified 1690.7897 0.78973904 4339 Q9H0U9 TSPYL1 Testis-specific Y-encoded-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.445 58.56 2 1.5074E-38 66708 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 142.91 128.75 118140000 0 0 0 5825900 7392800 8970700 10187000 8226600 8119200 8878900 14419000 13854000 11806000 7577300 12881000 45357 4339 40653 380382;380383;380384;380385;380386;380387;380388;380389;380390;380391;380392;380393 300067;300068;300069;300070;300071;300072;300073;300074;300075;300076;300077;300078 300073 12 SASEPSLHR Unmodified 982.48321 0.48320752 769;919 P10398;P04049 ARAF;RAF1 Serine/threonine-protein kinase A-Raf;RAF proto-oncogene serine/threonine-protein kinase no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 13.184 13.339 2 0.0034358 12080 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 106.04 65.939 43182000 0 0 0 2261000 2647000 2774800 3928500 0 2265600 4389900 4139100 4950400 5617600 3546900 6661300 45358 919;769 40654 380394;380395;380396;380397;380398;380399;380400;380401;380402;380403;380404 300079;300080;300081;300082;300083;300084;300085 300083 7 SASLDNGGCALTTFSVLEGEK Unmodified 2155.0103 0.010313275 1360 P35610 SOAT1 Sterol O-acyltransferase 1 yes yes 0 0 0 By MS/MS 2 0 1 1 89.768 84.895 2 1.4619E-23 105483 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.48 131.2 12179000 0 12179000 0 0 0 0 0 0 0 0 0 0 0 0 0 45359 1360 40655 380405 300086 300086 1 SASLDSPVLLVIK Unmodified 1340.7915 0.79151736 3463 Q8NI08 NCOA7 Nuclear receptor coactivator 7 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 92.045 88.516 2 0.027249 107109 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 58.699 39.919 20810000 0 19318000 1492300 0 0 0 0 0 0 0 0 0 0 0 0 45360 3463 40656 380406;380407;380408 300087;300088 300088 0 SASLDVEPIYTFR Unmodified 1496.7511 0.75110911 2225 Q13033 STRN3 Striatin-3 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 82.055 82.113 2 0.0088134 94719 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.833 45.696 17230000 0 0 0 0 1502500 1915100 1350800 0 0 3438600 0 0 0 2552900 6469900 45361 2225 40657 380409;380410;380411;380412;380413;380414 300089 300089 1 SASLSSAATTGLTTQQR Unmodified 1678.8486 0.84859132 4584 Q9NR09 BIRC6 Baculoviral IAP repeat-containing protein 6 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 48.238 48.734 2 1.2376E-07 54914 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 80.522 64.269 16175000 0 0 0 0 0 0 0 0 0 0 5798800 0 2958800 0 7417500 45362 4584 40658 380415;380416;380417;380418 300090;300091;300092 300092 2 SASLVVPSDIPK Unmodified 1211.6762 0.67615325 603 O94915 FRYL Protein furry homolog-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 69.139 69.297 2 0.002101 80037 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 64.04 44.769 17243000 0 0 0 0 1037900 0 1589800 1499900 0 1452800 2490600 1800100 1747000 2401000 3223600 45363 603 40659 380419;380420;380421;380422;380423;380424;380425;380426;380427 300093;300094;300095;300096 300096 4 SASMHPYQR Unmodified 1075.4869 0.48691269 3846 Q96G25 MED8 Mediator of RNA polymerase II transcription subunit 8 yes yes 0 0 0 By MS/MS 2 0 1 1 15.343 11.23 2 0.026962 16642 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.198 39.031 14934000 14934000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45364 3846 40660 380428 300097 300097 1 SASNIDDVLGHHTGFLDTCLK Unmodified 2299.0903 0.09029493 4126 Q9BSJ2 TUBGCP2 Gamma-tubulin complex component 2 yes yes 0 0 0 By MS/MS 3 0 1 1 83.96 80.709 4 0.013789 96718 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 28.178 24.738 2611900 0 2611900 0 0 0 0 0 0 0 0 0 0 0 0 0 45365 4126 40661 380429 300098 300098 1 SASNTAAEFGEPLPK Unmodified 1517.7362 0.73618733 485 O75362 ZNF217 Zinc finger protein 217 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 57.685 57.824 2 0.0010634 65903 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 59.57 43.316 13543000 0 0 0 0 0 0 6016900 7526200 0 0 0 0 0 0 0 45366 485 40662 380430;380431;380432 300099;300100;300101;300102 300100 4 SASPCIADK Unmodified 947.43823 0.43823117 2113 Q05209 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 15.513 15.673 2 0.009035 15341 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 67.897 51.424 52686000 0 0 0 1860000 3127900 0 4842400 0 2872000 5180100 8397500 0 9158800 7736500 9510500 45367 2113 40663 380433;380434;380435;380436;380437;380438;380439;380440;380441 300103;300104;300105;300106;300107;300108 300107 6 SASPFNLAEK Unmodified 1062.5346 0.53457439 2828 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.5 3.12 3 13 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 55.282 54.269 2 0.0015513 61211 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 93.178 38.629 994070000 13053000 764250000 8154900 7308900 9985400 20376000 15696000 11628000 8498700 17076000 22918000 26948000 16086000 17054000 35044000 45368 2828 40664 380442;380443;380444;380445;380446;380447;380448;380449;380450;380451;380452;380453;380454;380455;380456;380457 300109;300110;300111;300112;300113;300114;300115;300116;300117;300118;300119;300120;300121;300122 300110 8 SASPFNLAEKPK Unmodified 1287.6823 0.68230126 2828 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog yes yes 0 0 1 By MS/MS 2 0 1 1 57.718 49.538 3 0.03394 67469 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 33.204 23.921 39211000 39211000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45369 2828 40665 380458 300123 300123 1 SASPYHGFTIVNR Unmodified 1447.7208 0.72081203 4553 Q9NPI6 DCP1A mRNA-decapping enzyme 1A yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 55.287 55.586 3 0.033532 62168 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 30.483 23.315 19079000 0 0 0 0 0 0 0 2561700 0 2916100 4020800 0 2371800 2782200 4426600 45370 4553 40666 380459;380460;380461;380462;380463;380464 300124 300124 1 SASQGALTSPSVSFSNHR Unmodified 1831.8813 0.88128843 2776 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 49.932 49.901 3 0.030884 55157 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 31.111 26.353 32224000 0 0 0 3777900 6556000 0 6203500 0 0 0 0 0 0 6052000 9635000 45371 2776 40667 380465;380466;380467;380468;380469 300125 300125 0 SASSASSLFSPSSTLFSSSR Unmodified 1991.9436 0.94361392 2425 Q14671 PUM1 Pumilio homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 83.793 83.857 2;3 1.0713E-156 97096 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 204.28 182.24 355550000 0 0 0 10886000 20587000 26174000 28313000 36982000 27477000 35210000 29253000 43516000 28802000 23790000 44560000 45372 2425 40668 380470;380471;380472;380473;380474;380475;380476;380477;380478;380479;380480;380481;380482;380483;380484;380485;380486;380487;380488;380489;380490;380491;380492;380493 300126;300127;300128;300129;300130;300131;300132;300133;300134;300135;300136;300137;300138;300139;300140;300141;300142;300143;300144;300145;300146;300147 300128 20 SASSDTSEELNSQDSPPK Unmodified 1877.8127 0.81265932 209 O14745 SLC9A3R1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 yes yes 0 0 0 By MS/MS 10 0 1 1 28.746 29.441 2 7.2239E-08 30832 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.087 79.357 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45373 209 40669 380494 300148 300148 1 SASSGAEGDVSSEREP Unmodified 1563.6649 0.66487288 3514 Q8TEA8 DTD1 D-tyrosyl-tRNA(Tyr) deacylase 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 22.35 22.677 2 0.031738 22604 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 52.576 34.314 24200000 0 0 0 1286100 0 731940 0 0 0 0 5491000 6478700 0 3802600 6410000 45374 3514 40670 380495;380496;380497;380498;380499;380500 300149 300149 1 SASSLLEQRPK Acetyl (Protein N-term) 1256.6725 0.67246486 5227 Q9Y5A9 YTHDF2 YTH domain-containing family protein 2 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 56.363 55.205 2 6.3595E-251 62513 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 264.3 222.87 779040000 4947700 62349000 0 26477000 28959000 37559000 54274000 41106000 41328000 73743000 90297000 67797000 55352000 62600000 132250000 45375 5227 40671 380501;380502;380503;380504;380505;380506;380507;380508;380509;380510;380511;380512;380513;380514;380515 300150;300151;300152;300153;300154;300155;300156;300157;300158;300159;300160;300161;300162;300163;300164;300165;300166 300155 17 SASSSAAGSPGGLTSLQQQK Unmodified 1860.9177 0.91773352 3434 Q8NEZ2 VPS37A Vacuolar protein sorting-associated protein 37A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 45.009 44.78 2 3.4759E-62 50257 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 179.83 168.62 140280000 0 17101000 0 0 0 9073400 10043000 10369000 6684700 9684600 14503000 14284000 19435000 7321200 21779000 45376 3434 40672 380516;380517;380518;380519;380520;380521;380522;380523;380524;380525;380526;380527 300167;300168;300169;300170;300171;300172;300173;300174;300175;300176;300177;300178 300173 12 SASSYSDIEEIATPDSSAPSSPK Unmodified 2325.0496 0.049595132 3432 Q8NEY1 NAV1 Neuron navigator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 2 2 2 2 2 2 1 1 1 2 1 1 69.691 69.71 2;3 9.7029E-34 79603 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 101.15 96.163 102390000 0 0 0 7393000 8291100 9758500 11240000 9582000 8838000 5696800 7126100 9971600 14377000 3782700 6335400 45377 3432 40673 380528;380529;380530;380531;380532;380533;380534;380535;380536;380537;380538;380539;380540;380541;380542;380543;380544;380545;380546 300179;300180;300181;300182;300183;300184;300185;300186;300187;300188;300189;300190;300191;300192 300182 12 SASTAGDIACAFRPVK Unmodified 1649.8195 0.8195398 451 O75044 SRGAP2 SLIT-ROBO Rho GTPase-activating protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 62.626 62.845 3 0.01635 71901 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 41.967 36.7 21853000 0 0 0 0 0 3954100 0 3790300 3268700 0 0 0 0 4770800 6069400 45378 451 40674 380547;380548;380549;380550;380551;380552 300193;300194;300195 300193 3 SASTEELRNPDFQK Unmodified 1620.7744 0.77436375 2429 Q14678 KANK1 KN motif and ankyrin repeat domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 38.47 37.954 3 0.00068847 49177 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.889 55.727 191200000 0 23569000 8065900 8437500 9176800 10951000 0 16419000 11552000 12458000 20476000 22251000 16500000 13155000 18193000 45379 2429 40675 380553;380554;380555;380556;380557;380558;380559;380560;380561;380562;380563;380564;380565 300196;300197;300198;300199;300200;300201;300202;300203;300204;300205;300206 300198 10 SASVAPFTCK Unmodified 1066.5117 0.51173046 1600 P49790 NUP153 Nuclear pore complex protein Nup153 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40.12 39.129 2 0.0017096 43684 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 94.85 74.15 469470000 10496000 238320000 2583400 10754000 12706000 14851000 17027000 18318000 15560000 27731000 20429000 29089000 0 20729000 30878000 45380 1600 40676 380566;380567;380568;380569;380570;380571;380572;380573;380574;380575;380576;380577;380578;380579 300207;300208;300209;300210;300211;300212;300213;300214;300215;300216;300217 300207 9 SASVTASSESPVEIQNPYLHVEPEK Unmodified 2697.3134 0.31335481 2333 Q13625 TP53BP2 Apoptosis-stimulating of p53 protein 2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 79.417 75.375 3 8.4492E-92 93762 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.87 133.76 175010000 0 175010000 0 0 0 0 0 0 0 0 0 0 0 0 0 45381 2333 40677 380580;380581 300218;300219 300218 2 SASVVSVISR Acetyl (Protein N-term) 1045.5768 0.57677356 1859 P61803 DAD1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 yes yes 1 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching 10 0 8 1 1 1 1 1 1 1 1 76.188 76.197 2 0.0030315 87658 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 57.859 32.122 43800000 0 0 0 6915300 4105600 0 4952300 6128600 3194200 5161900 0 9299100 4043000 0 0 45382 1859 40678 380582;380583;380584;380585;380586;380587;380588;380589 300220;300221;300222;300223 300222 4 SASWGSADQLK Unmodified 1148.5462 0.54620171 3171 Q86VQ1 GLCCI1 Glucocorticoid-induced transcript 1 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.627 41.804 2 0.00029926 46624 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 107.57 86.274 109410000 0 0 0 5035400 5590300 7668600 9200600 7105700 7771000 10257000 13812000 12295000 10078000 8604900 11994000 45383 3171 40679 380590;380591;380592;380593;380594;380595;380596;380597;380598;380599;380600;380601 300224;300225;300226;300227;300228;300229;300230;300231;300232 300229 9 SATADQEFSK Unmodified 1082.488 0.48801813 4666 Q9NVE7 PANK4 Pantothenate kinase 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 16.48 16.681 2 1.5906E-16 16794 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 168.27 141.57 488720000 0 0 0 101120000 171290000 163870000 0 11239000 9606600 0 7621200 12556000 3439000 3144400 4825300 45384 4666 40680 380602;380603;380604;380605;380606;380607;380608;380609;380610;380611 300233;300234;300235;300236;300237;300238;300239;300240 300239 4 SATDADVVNSGWLVVGK Unmodified 1716.8683 0.86826413 3615 Q92538 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 82.224 82.296 2 1.3531E-09 95242 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 85.288 79.443 20108000 0 0 0 0 1573400 3780000 1566000 2227100 0 5429300 3465800 0 2066900 0 0 45385 3615 40681 380612;380613;380614;380615;380616;380617;380618;380619 300241;300242;300243;300244;300245;300246;300247 300243 7 SATDGNTSTTPPTSAK Unmodified 1534.7111 0.71109479 2332 Q13620 CUL4B Cullin-4B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.253 15.424 2 3.6396E-29 14437 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 143.55 135.32 88159000 0 0 0 3292700 2818100 5352200 6256500 3576300 2836100 6653100 10515000 12777000 9220100 10138000 14724000 45386 2332 40682 380620;380621;380622;380623;380624;380625;380626;380627;380628;380629;380630;380631 300248;300249;300250;300251;300252;300253;300254;300255;300256;300257;300258 300253 11 SATEHVQGHLGK Unmodified 1262.6367 0.63674805 1182 P25098 ADRBK1 Beta-adrenergic receptor kinase 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 14.142 10.977 3 0.0021728 14136 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 68.536 47.758 279670000 251030000 0 28645000 0 0 0 0 0 0 0 0 0 0 0 0 45387 1182 40683 380632;380633 300259;300260 300260 2 SATESTPGERGEEK Unmodified 1476.6692 0.66922997 2201 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 6.6404 6.7646 2;3 3.2634E-19 4176 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 143.97 120.65 194920000 0 0 0 9808200 11442000 11073000 15054000 11132000 13396000 17330000 19293000 19341000 15921000 19508000 31618000 45388 2201 40684 380634;380635;380636;380637;380638;380639;380640;380641;380642;380643;380644;380645;380646;380647;380648;380649;380650;380651;380652;380653;380654;380655;380656;380657 300261;300262;300263;300264;300265;300266;300267;300268;300269 300263 9 SATEVDNNFSK Unmodified 1210.5466 0.54659564 2974 Q6UN15 FIP1L1 Pre-mRNA 3'-end-processing factor FIP1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 24.493 24.802 2 0.00093347 25199 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.228 56.466 26121000 0 0 0 2268600 0 3331800 0 0 0 2474600 1834100 3266800 2264600 2228900 8451100 45389 2974 40685 380658;380659;380660;380661;380662;380663;380664;380665 300270;300271;300272;300273;300274 300272 5 SATGSVVSTRK Unmodified 1091.5935 0.59348625 3988 Q96SB8 SMC6 Structural maintenance of chromosomes protein 6 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 11.126 8.0334 2 0.017295 12450 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.098 58.461 20979000 19685000 0 1293800 0 0 0 0 0 0 0 0 0 0 0 0 45390 3988 40686 380666;380667 300275 300275 1 SATLASIDAELQK Unmodified 1345.7089 0.70890994 1328 P33176 KIF5B Kinesin-1 heavy chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 4 2 12 1 4 1 1 1 1 1 1 1 1 1 1 1 1 1 73.6 72.11 2;3 1.415E-21 82859 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 141.1 115.05 1246200000 15642000 818930000 13193000 16507000 22769000 43291000 26198000 32772000 25721000 41657000 50465000 35708000 27663000 31480000 44202000 45391 1328 40687 380668;380669;380670;380671;380672;380673;380674;380675;380676;380677;380678;380679;380680;380681;380682;380683;380684;380685 300276;300277;300278;300279;300280;300281;300282;300283;300284;300285;300286;300287;300288;300289;300290;300291;300292;300293;300294 300280 14 SATLLQLITK Unmodified 1086.6649 0.66486028 154 O00429 DNM1L Dynamin-1-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 87.894 86.634 2 3.7156E-05 109941 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.92 97.218 425020000 114840000 83593000 4511600 6428200 7433400 21796000 9378800 15184000 12814000 29942000 18068000 23551000 15194000 18425000 43867000 45392 154 40688 380686;380687;380688;380689;380690;380691;380692;380693;380694;380695;380696;380697;380698;380699;380700;380701;380702 300295;300296;300297;300298;300299;300300;300301;300302;300303;300304;300305;300306;300307;300308;300309;300310;300311;300312 300298 16 SATLPSTTVQPSPDDYGTELLRR Unmodified 2503.2554 0.255446 4642 Q9NUA8 ZBTB40 Zinc finger and BTB domain-containing protein 40 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 77.234 77.323 3 8.8556E-14 88921 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.535 56.445 76670000 0 0 0 0 4147900 9324400 0 5401500 6481800 8982500 0 12620000 7767900 8800800 13144000 45393 4642 40689 380703;380704;380705;380706;380707;380708;380709;380710;380711 300313;300314;300315;300316;300317;300318;300319;300320 300315 8 SATLPYIK Unmodified 891.50657 0.50656873 488 O75376 NCOR1 Nuclear receptor corepressor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56.167 55.268 2 0.021921 71822 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.097 49.273 197030000 5871900 74504000 0 4976500 17040000 6405900 7645200 7038800 6648300 9236300 10941000 10350000 10656000 9802600 15910000 45394 488 40690 380712;380713;380714;380715;380716;380717;380718;380719;380720;380721;380722;380723;380724;380725 300321;300322 300322 2 SATLRAELLQK Unmodified 1228.7139 0.71393574 4381 Q9H3P2 NELFA Negative elongation factor A yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 2 1 1 1 1 1 1 1 1 49.22 47.86 2;3 0.017736 68721 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.203 25.076 90316000 42965000 0 0 0 0 0 4145100 5848500 4702700 6324100 6854900 4815600 6068000 0 8592500 45395 4381 40691 380726;380727;380728;380729;380730;380731;380732;380733;380734;380735 300323;300324;300325 300325 2 SATNLPQLK Unmodified 970.54475 0.54474515 1613 P49916 LIG3 DNA ligase 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching 7.5 3.55 1 1 4 2 1 1 1 1 45.221 43.464 2 0.020819 56275 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.5 48.932 56222000 0 46259000 0 0 1794500 0 2000000 0 0 2892600 0 0 0 3276100 0 45396 1613 40692 380736;380737;380738;380739;380740;380741 300326;300327 300326 1 SATQFTGR Unmodified 866.42463 0.42463001 3412 Q8NCW5 APOA1BP NAD(P)H-hydrate epimerase yes yes 0 0 0 By matching By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 14.757 15.186 2 0.0044044 14567 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 110.81 69.305 69420000 0 0 0 0 0 0 0 0 0 0 17703000 10860000 0 13922000 26936000 45397 3412 40693 380742;380743;380744;380745 300328;300329 300329 2 SATREPPYRVPR Unmodified 1427.7633 0.76334555 1473 P43243 MATR3 Matrin-3 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.023 27.221 3 1.473E-22 28183 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 126.76 113.89 1071700000 0 0 0 43164000 52606000 99094000 63724000 81892000 80530000 85170000 100940000 131740000 137690000 92097000 103020000 45398 1473 40694 380746;380747;380748;380749;380750;380751;380752;380753;380754;380755;380756;380757 300330;300331;300332;300333;300334;300335;300336;300337;300338;300339;300340;300341;300342 300340 6 SATSPEGK Unmodified 775.3712 0.37119746 980 P13639 EEF2 Elongation factor 2 yes yes 0 0 0 By MS/MS By matching 1 0 2 1 1 108.99 112.07 2 0.025096 92977 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 126.28 63.563 717500000 673960000 43547000 0 0 0 0 0 0 0 0 0 0 0 0 0 45399 980 40695 380758;380759 300343 300343 0 SATSSSPGSPLHSLETSL Unmodified 1756.8479 0.84792262 1098 P20020 ATP2B1 Plasma membrane calcium-transporting ATPase 1 yes yes 0 0 0 By MS/MS 2 0 1 1 83.55 78.83 2 0.016536 97960 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 57.401 0 32278000 0 32278000 0 0 0 0 0 0 0 0 0 0 0 0 0 45400 1098 40696 380760 300344 300344 1 SATSSSVSNVVITK Unmodified 1378.7304 0.73037367 1457 P42566 EPS15 Epidermal growth factor receptor substrate 15 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 42.633 42.796 2 1.078E-05 46793 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 89.548 74.881 11795000 0 0 0 0 0 0 2318700 0 0 4646400 0 0 0 4830200 0 45401 1457 40697 380761;380762;380763 300345;300346 300346 2 SATSTSASPTLR Unmodified 1177.5939 0.59388018 452 O75061 DNAJC6 Putative tyrosine-protein phosphatase auxilin yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 21.366 21.539 2 0.0045019 22607 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 57.348 47.083 15765000 0 0 0 2907900 1638000 0 0 2487700 0 0 5903000 0 0 0 2828500 45402 452 40698 380764;380765;380766;380767;380768 300347;300348 300348 1 SATSVDQRPK Acetyl (Protein N-term) 1129.5728 0.57275081 3120 Q7Z739 YTHDF3 YTH domain-containing family protein 3 yes yes 1 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 17.341 16.589 2 9.7127E-89 16732 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 231.2 175.08 1671100000 9248200 83777000 6129800 75440000 67652000 90565000 117450000 80129000 111860000 127510000 180320000 147660000 138170000 153400000 281790000 45403 3120 40699 380769;380770;380771;380772;380773;380774;380775;380776;380777;380778;380779;380780;380781;380782;380783;380784 300349;300350;300351;300352;300353;300354;300355;300356;300357;300358;300359;300360;300361;300362 300359 10 SATSVDTQR Acetyl (Protein N-term) 1005.4727 0.47270242 4251 Q9BYJ9 YTHDF1 YTH domain-containing family protein 1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 19.724 19.902 2 0.0027035 20334 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 69.812 42.287 49155000 0 0 0 4646100 0 4260400 6560700 3824800 5418700 6500100 8619300 0 0 0 9324500 45404 4251 40700 380785;380786;380787;380788;380789;380790;380791;380792 300363;300364;300365;300366;300367 300364 5 SATTTPSGSPR Unmodified 1060.5149 0.51490158 2651 Q2M2I8 AAK1 AP2-associated protein kinase 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 8.5787 8.7069 2 0.026262 7161 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 40.331 26.335 28769000 0 0 0 1871300 1301500 1325400 2004000 1012000 1221300 2441600 6048800 3269800 2418400 1845000 4010300 45405 2651 40701 380793;380794;380795;380796;380797;380798;380799;380800;380801;380802;380803;380804 300368 300368 1 SATVCERGTPIK Unmodified 1317.6711 0.67108465 4012 Q99470 SDF2 Stromal cell-derived factor 2 yes yes 0 0 1 By MS/MS 2 0 1 1 27.684 22.295 3 0.0053144 31550 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.958 51.728 106710000 106710000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45406 4012 40702 380805 300369 300369 0 SATVKPGAVGAGEFVSPCESGDNTGEPSALEEQRGPLPLNK Unmodified 4152.007 0.0069658166 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 0 2 By MS/MS 2 0 1 1 79.71 77.136 4 4.4843E-21 93642 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 57.14 52.652 12439000 0 0 12439000 0 0 0 0 0 0 0 0 0 0 0 0 45407 2203 40703 380806 300370 300370 1 SATVVDAVNAAPLSGSK Acetyl (Protein N-term) 1627.8417 0.84171503 652 O95391 SLU7 Pre-mRNA-splicing factor SLU7 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.71 3.15 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83.281 83.771 2 8.0309E-55 92083 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 164.68 149.14 146990000 4995900 4919400 0 6055300 7983300 8983100 11539000 10131000 8496900 14397000 14669000 15666000 12257000 10589000 16314000 45408 652 40704 380807;380808;380809;380810;380811;380812;380813;380814;380815;380816;380817;380818;380819;380820 300371;300372;300373;300374;300375;300376;300377;300378;300379;300380;300381;300382;300383;300384 300375 14 SATYCEQLLQHVQAVPATQ Unmodified 2143.0368 0.036802797 3204 Q86Y56 DNAAF5 Dynein assembly factor 5, axonemal yes yes 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching 10 0 7 1 1 1 1 1 1 1 79.856 79.93 2 0.00088412 92326 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 59.306 46.428 34780000 0 0 0 0 2586300 4751100 0 2514200 0 5820100 0 8684500 0 4321700 6101700 45409 3204 40705 380821;380822;380823;380824;380825;380826;380827 300385 300385 1 SAVATAEALGLDRPASDK Unmodified 1770.9112 0.91119158 2989 Q6W2J9 BCOR BCL-6 corepressor yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.64 1.67 1 21 1 1 2 1 2 2 2 2 2 2 2 2 1 60.782 60.632 2;3 1.1951E-07 69514 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 80.638 71.058 213100000 0 26943000 0 8053800 8657700 11037000 14219000 12641000 16462000 19983000 18263000 27400000 16742000 15912000 16791000 45410 2989 40706 380828;380829;380830;380831;380832;380833;380834;380835;380836;380837;380838;380839;380840;380841;380842;380843;380844;380845;380846;380847;380848;380849 300386;300387;300388;300389;300390;300391;300392;300393;300394;300395;300396;300397;300398;300399;300400 300400 11 SAVCIADPLPTPSQEK Unmodified 1711.8451 0.84508585 4026 Q99575 POP1 Ribonucleases P/MRP protein subunit POP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.916 71.985 2 0.0012854 82877 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 67.456 54.029 62397000 0 0 0 3348500 4205500 3763700 3709200 3837200 3969100 6542600 5069700 6580400 6044700 7981500 7344400 45411 4026 40707 380850;380851;380852;380853;380854;380855;380856;380857;380858;380859;380860;380861 300401;300402;300403;300404;300405;300406;300407;300408;300409 300402 9 SAVDLSCSR Unmodified 993.45494 0.45494386 5182 Q9Y446 PKP3 Plakophilin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 24.175 24.294 2 0.031803 26039 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 47.603 29.617 25902000 0 0 0 2769600 1937600 0 3520300 2625700 0 4215000 0 8458500 2375600 0 0 45412 5182 40708 380862;380863;380864;380865;380866;380867;380868 300410;300411;300412 300412 3 SAVDYNTCAGVWSQDK Unmodified 1799.7785 0.77846285 5227 Q9Y5A9 YTHDF2 YTH domain-containing family protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 59.118 58.28 2 3.5071E-38 72808 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 166.04 166.04 113690000 0 76773000 0 0 0 4363100 0 0 2387700 3048000 5817700 4052600 3675800 3736300 9838900 45413 5227 40709 380869;380870;380871;380872;380873;380874;380875;380876;380877;380878 300413;300414;300415;300416;300417;300418;300419;300420 300415 8 SAVEAERLVAGK Unmodified 1228.6776 0.67755023 788 P04843 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 44.356 40.053 2 0.0298 49942 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 67.726 19.902 7972600 0 2100600 5872100 0 0 0 0 0 0 0 0 0 0 0 0 45414 788 40710 380879;380880 300421;300422 300421 2 SAVEAQNEVTENPK Unmodified 1514.7213 0.72126554 2661 Q32MZ4 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.34 1 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 32.364 32.211 2 6.0572E-34 92690 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 188.96 154.16 439490000 59215000 15414000 0 11241000 16984000 22140000 22898000 15855000 17853000 25748000 53046000 62723000 25240000 31798000 59339000 45415 2661 40711 380881;380882;380883;380884;380885;380886;380887;380888;380889;380890;380891;380892;380893;380894;380895 300423;300424;300425;300426;300427;300428;300429;300430;300431;300432;300433;300434;300435;300436;300437 300429 15 SAVEDEGLK Unmodified 946.46074 0.46074075 908 P0DMV9;P0DMV8 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.85 3.86 7 1 12 2 4 2 1 1 1 1 1 1 1 1 1 1 1 1 21.376 20.5 2 0.003237 21202 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 90.709 37.923 9668900000 805600000 3365300000 39186000 290280000 239000000 277950000 330050000 224800000 176310000 379830000 674580000 705710000 366800000 542420000 1251100000 45416 908 40712 380896;380897;380898;380899;380900;380901;380902;380903;380904;380905;380906;380907;380908;380909;380910;380911;380912;380913;380914;380915 300438;300439;300440;300441;300442;300443;300444;300445;300446;300447;300448;300449;300450;300451;300452;300453;300454;300455;300456;300457;300458;300459;300460;300461;300462;300463;300464;300465;300466 300441 28 SAVENCQDSWRR Unmodified 1506.6634 0.66337351 1680 P52209 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes yes 0 0 1 By MS/MS 10 0 1 1 23.628 24.289 3 0.0023357 24693 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.354 36.39 9411500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9411500 45417 1680 40713 380916 300467 300467 1 SAVENKTSPHSK Unmodified 1283.647 0.64697839 1036 P16383 GCFC2 GC-rich sequence DNA-binding factor 2 yes yes 0 0 1 By MS/MS 10 0 1 1 26.207 26.898 3 0.04574 27925 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 27.914 14.906 7016600 0 0 0 0 0 0 0 0 0 0 0 7016600 0 0 0 45418 1036 40714 380917 300468 300468 0 SAVEQVVK Unmodified 858.48108 0.48108226 2816 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 24.051 23.88 2 0.015746 25393 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 68.383 29.591 30689000 0 0 0 0 14688000 16000000 0 0 0 0 0 0 0 0 0 45419 2816 40715 380918;380919 300469;300470 300469 2 SAVESGQADDER Unmodified 1262.5375 0.53748752 1971 P78318 IGBP1 Immunoglobulin-binding protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching 10 0 4 1 1 1 1 8.0519 8.2799 2 0.038558 6943 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 42.743 30.116 6810700 0 0 0 0 0 669060 0 0 0 0 2373800 0 0 1670200 2097600 45420 1971 40716 380920;380921;380922;380923 300471 300471 1 SAVESGQADDERVR Unmodified 1517.707 0.70701246 1971 P78318 IGBP1 Immunoglobulin-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.607 14.771 3 4.4526E-19 13558 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 128.96 108.03 190990000 0 0 0 10327000 7485900 15332000 13435000 9432300 10169000 20718000 26143000 17142000 15955000 15035000 29814000 45421 1971 40717 380924;380925;380926;380927;380928;380929;380930;380931;380932;380933;380934;380935 300472;300473;300474;300475;300476;300477;300478;300479;300480;300481;300482;300483 300475 12 SAVGFDYQGK Unmodified 1070.5033 0.50327426 2399 Q14247 CTTN Src substrate cortactin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 41.998 41.586 2 0.0015597 46691 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 93.267 71.307 455250000 11957000 0 0 22090000 25172000 24743000 28963000 30918000 21201000 33077000 63086000 64829000 41734000 37174000 50305000 45422 2399 40718 380936;380937;380938;380939;380940;380941;380942;380943;380944;380945;380946;380947;380948;380949;380950 300484;300485;300486;300487;300488;300489;300490;300491;300492;300493;300494;300495;300496;300497;300498;300499;300500;300501;300502 300496 14 SAVGFEYQGK Unmodified 1084.5189 0.51892433 2399 Q14247 CTTN Src substrate cortactin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 40.924 40.362 2 0.0019707 44131 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.308 71.46 705130000 0 286450000 0 25371000 24892000 24169000 33770000 21866000 21791000 34307000 42676000 54656000 39519000 34246000 61422000 45423 2399 40719 380951;380952;380953;380954;380955;380956;380957;380958;380959;380960;380961;380962;380963;380964 300503;300504;300505;300506;300507;300508;300509;300510;300511;300512;300513;300514;300515;300516 300507 13 SAVGHEYQSK Unmodified 1104.52 0.51998696 2399 Q14247 CTTN Src substrate cortactin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 7.1237 6.4369 2 1.4285E-28 8978 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 200.56 138.46 355250000 45166000 149490000 100610000 3233600 4612200 3958600 5097700 3906200 4763000 3104800 8168800 5027900 7120400 5030700 5961400 45424 2399 40720 380965;380966;380967;380968;380969;380970;380971;380972;380973;380974;380975;380976;380977;380978;380979;380980 300517;300518;300519;300520;300521;300522;300523;300524;300525;300526;300527;300528;300529;300530;300531 300525 13 SAVGHVFSLEK Unmodified 1172.619 0.61897272 2863 Q69YN4 KIAA1429 Protein virilizer homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 51.333 51.465 3 0.0015472 58027 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 57.802 40.964 86501000 0 0 0 5760300 4602400 17782000 7963200 0 8146900 0 7966500 13570000 0 8676500 12033000 45425 2863 40721 380981;380982;380983;380984;380985;380986;380987;380988;380989 300532;300533;300534;300535;300536 300532 5 SAVGNAAHTSDR Unmodified 1184.5534 0.55341235 1788 P56945 BCAR1 Breast cancer anti-estrogen resistance protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 3 2 3 2 1 1 2 2 2 6.4014 6.517 2;3 0.00074676 3794 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.143 44.721 72067000 0 0 0 5109900 5609100 2628500 9809300 5535400 7126700 9413400 2518600 1727800 9288200 8737100 4563200 45426 1788 40722 380990;380991;380992;380993;380994;380995;380996;380997;380998;380999;381000;381001;381002;381003;381004;381005;381006;381007;381008;381009;381010;381011;381012;381013 300537;300538;300539;300540;300541;300542;300543;300544;300545;300546;300547;300548;300549 300540 6 SAVLHEGEGNIRSVK Unmodified 1594.8427 0.84271808 1594 P49754 VPS41 Vacuolar protein sorting-associated protein 41 homolog yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 36.163 31.261 3 0.017328 43657 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 32.523 25.77 48358000 46037000 0 2321200 0 0 0 0 0 0 0 0 0 0 0 0 45427 1594 40723 381014;381015 300550 300550 1 SAVLHSQSSSSSSR Unmodified 1418.675 0.67498405 3184 Q86WJ1 CHD1L Chromodomain-helicase-DNA-binding protein 1-like yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 8.8363 5.5774 2;3 0.028661 9591 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.595 55.444 34752000 26261000 0 8491200 0 0 0 0 0 0 0 0 0 0 0 0 45428 3184 40724 381016;381017;381018 300551;300552 300552 0 SAVLHSQSSSSSSRQLVP Unmodified 1855.9388 0.93880331 3184 Q86WJ1 CHD1L Chromodomain-helicase-DNA-binding protein 1-like yes yes 0 0 1 By MS/MS 2 0 1 1 53.258 45.195 3 1.1229E-07 62134 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.01 86.94 68918000 68918000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45429 3184 40725 381019 300553 300553 1 SAVLQEAR Unmodified 872.47158 0.4715802 5267;4839 Q9UBF2;Q9Y678 COPG2;COPG1 Coatomer subunit gamma-2;Coatomer subunit gamma-1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 20.048 19.713 2 0.025292 20511 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 58.815 20.023 415240000 0 12689000 0 40331000 34128000 40579000 49433000 30630000 39915000 57214000 0 0 55550000 54767000 0 45430 4839;5267 40726 381020;381021;381022;381023;381024;381025;381026;381027;381028;381029 300554;300555;300556 300556 3 SAVLQPGCPSVGIPHSGYVNAQLEK Unmodified 2607.3115 0.31152109 4805 Q9P253 VPS18 Vacuolar protein sorting-associated protein 18 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 80.59 72.459 3 0.0013377 95052 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 22.981 16.053 10003000 10003000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45431 4805 40727 381030 300557 300557 1 SAVPFLPVNPEYSATR Unmodified 1746.8941 0.89408495 5126 Q9Y2X7 GIT1 ARF GTPase-activating protein GIT1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 84.729 84.794 2 1.6671E-07 98368 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 86.911 70.533 181510000 0 0 0 6179400 10282000 16580000 12213000 13258000 11565000 21630000 17038000 17010000 11501000 13433000 30823000 45432 5126 40728 381031;381032;381033;381034;381035;381036;381037;381038;381039;381040;381041;381042 300558;300559;300560;300561;300562;300563;300564;300565;300566;300567;300568;300569 300567 11 SAVPFNQYLPNK Unmodified 1376.7089 0.70885036 5054 Q9UPQ0 LIMCH1 LIM and calponin homology domains-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 74.738 74.204 2 2.1817E-05 85576 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 130.56 111.78 536060000 0 80911000 0 23002000 23268000 29032000 38985000 35373000 37099000 41417000 45621000 49364000 39320000 29168000 63498000 45433 5054 40729 381043;381044;381045;381046;381047;381048;381049;381050;381051;381052;381053;381054;381055;381056 300570;300571;300572;300573;300574;300575;300576;300577;300578;300579;300580;300581;300582 300576 12 SAVPPGADK Unmodified 840.43413 0.43413207 1513 P46783 RPS10 40S ribosomal protein S10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 1 3 2 2 3 2 1 1 1 2 11.034 11.17 2 0.014114 8002 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 58.782 15.658 60228000 0 0 0 0 2512100 10366000 6309400 4445000 6021800 5957900 4538200 6089800 0 0 13988000 45434 1513 40730 381057;381058;381059;381060;381061;381062;381063;381064;381065;381066;381067;381068;381069;381070;381071;381072;381073;381074;381075 300583;300584;300585;300586;300587;300588;300589 300586 7 SAVQGPPER Unmodified 939.47739 0.47739386 751;752 P01876;P01877 IGHA1;IGHA2 Ig alpha-1 chain C region;Ig alpha-2 chain C region no no 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 14.719 14.852 2 0.0078297 14474 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 71.379 37.526 68317000 0 0 0 13979000 0 8381000 6449000 0 5287500 0 0 10387000 18659000 5175000 0 45435 751;752 40731 381076;381077;381078;381079;381080;381081;381082;381083 300590;300591 300591 2 SAVQKPPSTGSAPAIESVD Unmodified 1839.9214 0.92142191 4652 Q9NUQ3 TXLNG Gamma-taxilin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.248 52.393 2 0.0038397 59277 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 57.802 45.241 91450000 0 0 0 7199100 7442900 7046200 7524400 6196400 5317400 8292400 10011000 2276200 5481400 9045300 15617000 45436 4652 40732 381084;381085;381086;381087;381088;381089;381090;381091;381092;381093;381094;381095 300592;300593;300594;300595;300596 300593 5 SAVQQVAQK Unmodified 957.52434 0.52434406 674 O95625 ZBTB11 Zinc finger and BTB domain-containing protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 33 2 3 2 3 3 3 4 2 2 4 3 2 9.568 9.7012 2 0.0036746 11819 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 89.296 59.92 166330000 0 0 0 8536100 12139000 10450000 16195000 16790000 16180000 18577000 12290000 8935900 21653000 14990000 9599000 45437 674 40733 381096;381097;381098;381099;381100;381101;381102;381103;381104;381105;381106;381107;381108;381109;381110;381111;381112;381113;381114;381115;381116;381117;381118;381119;381120;381121;381122;381123;381124;381125;381126;381127;381128 300597;300598;300599;300600;300601;300602;300603;300604;300605;300606;300607;300608;300609;300610;300611 300600 15 SAVRPASLNLNR Unmodified 1296.7262 0.72623176 3933 Q96N67 DOCK7 Dedicator of cytokinesis protein 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.25 39.429 3 2.0799E-08 42706 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 117.03 106.18 289890000 0 0 0 19311000 21157000 17317000 25212000 19879000 12596000 31245000 30474000 34461000 22729000 24001000 31511000 45438 3933 40734 381129;381130;381131;381132;381133;381134;381135;381136;381137;381138;381139;381140 300612;300613;300614;300615;300616;300617;300618;300619;300620;300621;300622;300623 300619 11 SAVSTSVPTKPTENISK Unmodified 1744.9207 0.92069363 2810 Q5VT52 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.562 39.741 3 3.1153E-10 44448 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 89.358 77.884 481450000 0 0 0 25141000 29167000 25366000 32596000 39590000 27816000 47179000 53984000 68168000 46016000 31853000 54572000 45439 2810 40735 381141;381142;381143;381144;381145;381146;381147;381148;381149;381150;381151;381152 300624;300625;300626;300627;300628;300629;300630;300631;300632;300633;300634;300635;300636;300637;300638 300638 15 SAVTALWGK Unmodified 931.51272 0.51271674 1967 P68871 HBB Hemoglobin subunit beta;LVV-hemorphin-7;Spinorphin yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 62.97 62.713 2 0.019448 71463 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 53.968 30.949 22653000 0 0 0 13934000 0 0 0 8719600 0 0 0 0 0 0 0 45440 1967 40736 381153;381154 300639;300640 300639 2 SAVTTVVNPK Unmodified 1014.571 0.5709599 813 P05556 ITGB1 Integrin beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 32.286 31.773 2 0.0016854 35303 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 89.355 49.003 484330000 0 87277000 0 20443000 31582000 28927000 30542000 26818000 21480000 34052000 37697000 63134000 40707000 31855000 29819000 45441 813 40737 381155;381156;381157;381158;381159;381160;381161;381162;381163;381164;381165;381166;381167;381168 300641;300642;300643;300644;300645;300646;300647;300648;300649;300650;300651;300652;300653;300654;300655;300656 300642 16 SAVVAAAAPASVADDTPPPERR Unmodified 2147.0971 0.097094868 3063 Q7LFL8 CXXC5 CXXC-type zinc finger protein 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 53.495 53.757 3 7.0769E-14 61045 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 56.055 46.891 107640000 0 0 0 0 12927000 0 0 21034000 0 0 18229000 14633000 11940000 13199000 15674000 45442 3063 40738 381169;381170;381171;381172;381173;381174;381175;381176 300657;300658;300659;300660;300661;300662;300663;300664;300665 300665 8 SAVVEMLIMR 2 Oxidation (M) 1179.5992 0.59916526 2284 Q13418 ILK Integrin-linked protein kinase yes yes 0 2 0 By matching By MS/MS By matching By matching By matching 10 0 6 1 2 1 1 1 65.883 66.199 2 0.011978 75755 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 40.994 23.763 37032000 0 0 0 0 0 0 1364800 0 0 0 0 17873000 6202400 5643500 5948800 45443 2284 40739 381177;381178;381179;381180;381181;381182 300666;300667 300666 3720;3721 1 SAVYPLLYR Unmodified 1080.5968 0.59678072 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 72.898 72.982 2 0.010275 84014 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 64.567 58.819 35523000 0 0 0 0 4555500 0 0 5146500 2787800 4906700 0 7178600 5534100 5413600 0 45444 5262 40740 381183;381184;381185;381186;381187;381188;381189 300668;300669;300670;300671;300672 300669 5 SAWLSGYENPVVSR Unmodified 1563.7682 0.76815616 983 P13674 P4HA1 Prolyl 4-hydroxylase subunit alpha-1 yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 76.216 76.324 2 0.019932 87633 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.645 15.655 37435000 0 0 0 0 1637500 0 2546000 0 0 4524500 5528000 9100600 0 3428000 10671000 45445 983 40741 381190;381191;381192;381193;381194;381195;381196 300673 300673 1 SAWQTLNEFAR Unmodified 1321.6415 0.64149908 5301 Q9Y6Y8 SEC23IP SEC23-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 78.185 78.331 2 0.00029757 90509 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 90.108 72.877 74953000 0 0 0 0 0 4682800 2291900 4274600 4818700 10475000 5872500 6582400 4722000 7668100 23565000 45446 5301 40742 381197;381198;381199;381200;381201;381202;381203;381204;381205;381206 300674;300675;300676;300677;300678;300679;300680;300681;300682 300675 9 SAYDSTMETMNYAQIR 2 Oxidation (M) 1911.7979 0.79787766 1714 P53396 ACLY ATP-citrate synthase yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 2 2 1 2 2 1 2 1 1 1 1 48.604 48.721 2;3 6.836E-85 54777 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 189.13 183.29 3161400000 0 0 0 91689000 229710000 138830000 580180000 596070000 725710000 137040000 190610000 440900000 0 9200400 21454000 45447 1714 40743 381207;381208;381209;381210;381211;381212;381213;381214;381215;381216;381217;381218;381219;381220;381221;381222;381223 300683;300684;300685;300686;300687;300688;300689;300690;300691;300692;300693;300694;300695;300696;300697;300698;300699 300692 2783;2784 15 SAYDSTMETMNYAQIR Oxidation (M) 1895.803 0.80296304 1714 P53396 ACLY ATP-citrate synthase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 49 4 4 5 5 6 5 4 5 5 1 2 3 60.136 60.24 2;3 4.0836E-71 69050 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 178.81 175.05 2672100000 0 0 0 67870000 112300000 137250000 455730000 688600000 533300000 129610000 201100000 307740000 2097800 6678500 29786000 45448 1714 40743 381224;381225;381226;381227;381228;381229;381230;381231;381232;381233;381234;381235;381236;381237;381238;381239;381240;381241;381242;381243;381244;381245;381246;381247;381248;381249;381250;381251;381252;381253;381254;381255;381256;381257;381258;381259;381260;381261;381262;381263;381264;381265;381266;381267;381268;381269;381270;381271;381272 300700;300701;300702;300703;300704;300705;300706;300707;300708;300709;300710;300711;300712;300713;300714;300715;300716;300717;300718;300719;300720;300721;300722;300723;300724;300725;300726;300727;300728;300729;300730;300731;300732;300733 300719 2783;2784 25 SAYDSTMETMNYAQIR Unmodified 1879.808 0.80804841 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 22 2 2 2 2 2 2 2 2 2 1 1 2 72.114 72.177 2;3 1.2452E-59 82729 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 174.42 160.41 1769900000 0 0 0 27736000 82766000 101160000 191680000 575540000 288170000 122320000 134990000 188070000 2460300 6284700 48683000 45449 1714 40743 381273;381274;381275;381276;381277;381278;381279;381280;381281;381282;381283;381284;381285;381286;381287;381288;381289;381290;381291;381292;381293;381294 300734;300735;300736;300737;300738;300739;300740;300741;300742;300743;300744;300745;300746;300747;300748;300749;300750;300751;300752;300753 300745 14 SAYEEQRIK Unmodified 1122.5669 0.56693715 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 1 By matching By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 17.866 14.351 2 8.2037E-07 18227 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 180.45 121.63 223550000 19782000 93771000 109990000 0 0 0 0 0 0 0 0 0 0 0 0 45450 2378 40744 381295;381296;381297;381298 300754;300755;300756 300755 2 SAYEFSETESMLK Oxidation (M) 1536.6654 0.66539015 896 P09960 LTA4H Leukotriene A-4 hydrolase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 4.83 3.67 3 1 2 3 1 1 1 59.24 56.55 2 4.437E-13 71868 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.63 115.93 449300000 0 423700000 5712700 0 0 0 0 0 0 0 7160700 0 0 0 12727000 45451 896 40745 381299;381300;381301;381302;381303;381304 300757;300758;300759;300760;300761;300762 300757 1160 6 SAYEFSETESMLK Unmodified 1520.6705 0.67047553 896 P09960 LTA4H Leukotriene A-4 hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.12 3.79 4 1 3 1 3 1 1 1 1 74.4 71.75 2 3.5849E-13 89832 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 150.1 135.2 1145900000 20270000 1093100000 7048700 0 0 0 0 0 0 0 5167700 0 0 2680800 17648000 45452 896 40745 381305;381306;381307;381308;381309;381310;381311;381312 300763;300764;300765;300766;300767;300768 300763 6 SAYGGPVGAGIR Unmodified 1103.5724 0.57235688 69;88;107 CON__P08729;CON__Q3KNV1;P08729;CON__Q9DCV7 KRT7 Keratin, type II cytoskeletal 7 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.09 42.266 2 4.0184E-05 47171 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 90.761 70.975 + 624430000 0 0 0 33326000 45022000 46161000 43977000 55118000 38604000 53389000 66761000 85516000 41926000 41294000 73335000 45453 69;88;107 40746 381313;381314;381315;381316;381317;381318;381319;381320;381321;381322;381323;381324 300769;300770;300771;300772;300773;300774;300775;300776;300777;300778;300779;300780 300775 12 SAYLHPQQFDCEPGVLGSK Unmodified 2131.9997 0.99968901 2204 Q12899 TRIM26 Tripartite motif-containing protein 26 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.56 3.62 4 1 11 1 2 2 1 1 1 1 1 1 1 1 1 1 1 71.024 69.719 3 2.8788E-10 85952 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 76.704 72.753 214290000 92850000 39437000 19213000 0 2421400 4520900 1821900 3707400 3580800 4783200 7997100 9256000 6585800 6490400 11622000 45454 2204 40747 381325;381326;381327;381328;381329;381330;381331;381332;381333;381334;381335;381336;381337;381338;381339;381340 300781;300782;300783;300784;300785;300786;300787;300788;300789;300790;300791;300792;300793;300794 300791 14 SAYPPPAPAYALSSPR Unmodified 1643.8308 0.83075641 183 O14497 ARID1A AT-rich interactive domain-containing protein 1A yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 67.434 67.761 2 0.043352 77019 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 28.327 19.138 8150500 0 0 0 0 0 0 0 0 0 0 0 0 3320300 0 4830200 45455 183 40748 381341;381342 300795 300795 1 SAYQEAMDISK Oxidation (M) 1257.5547 0.55471749 1312 P31947 SFN 14-3-3 protein sigma yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 1 2 2 2 2 2 2 2 33.577 33.763 2 0.00018876 37064 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 93.325 85.004 358180000 0 0 0 66694000 12015000 16076000 18564000 0 8912700 25248000 46415000 41723000 27315000 28528000 66688000 45456 1312 40749 381343;381344;381345;381346;381347;381348;381349;381350;381351;381352;381353;381354;381355;381356;381357;381358;381359;381360;381361;381362;381363;381364;381365 300796;300797;300798;300799;300800;300801;300802;300803;300804;300805;300806;300807;300808;300809;300810;300811;300812;300813;300814;300815;300816;300817;300818;300819;300820 300808 1949 25 SAYQEAMDISK Unmodified 1241.5598 0.55980286 1312 P31947 SFN 14-3-3 protein sigma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.126 48.288 2 0.0064406 54157 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 56.548 41.287 626110000 0 0 0 80767000 14789000 26046000 21037000 24802000 10975000 37471000 75027000 70082000 31029000 69993000 164090000 45457 1312 40749 381366;381367;381368;381369;381370;381371;381372;381373;381374;381375;381376;381377 300821;300822;300823;300824;300825;300826;300827;300828;300829;300830;300831;300832;300833 300823 13 SCAHDWVYE Unmodified 1165.4499 0.44985848 1138 P22392;O60361 NME2;NME2P1 Nucleoside diphosphate kinase B;Putative nucleoside diphosphate kinase yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 47.547 46.258 2 0.0034047 52504 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 105.39 102.41 14554000000 219610000 4735400000 86834000 313730000 518130000 576410000 1069500000 1571600000 1514500000 931330000 1222300000 1565600000 16899000 45804000 166150000 45458 1138 40750 381378;381379;381380;381381;381382;381383;381384;381385;381386;381387;381388;381389;381390;381391;381392;381393 300834;300835;300836;300837;300838;300839;300840;300841;300842;300843;300844;300845;300846;300847;300848;300849;300850;300851;300852;300853;300854;300855;300856 300848 21 SCALAEDPQELR Unmodified 1387.6402 0.64017845 3255 Q8IX12 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.478 48.638 2 2.8637E-05 55414 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 97.456 87.224 263960000 0 0 0 11284000 14473000 22545000 14118000 18936000 15199000 27528000 27732000 28796000 21548000 24262000 37538000 45459 3255 40751 381394;381395;381396;381397;381398;381399;381400;381401;381402;381403;381404;381405 300857;300858;300859;300860;300861;300862;300863;300864;300865;300866;300867;300868;300869 300869 13 SCALAEDPQELRDGFQHPAR Unmodified 2296.0655 0.065477163 3255 Q8IX12 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 61.648 61.748 3;4 4.5073E-15 69662 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 88.565 83.308 738330000 0 0 0 18008000 14262000 54430000 31032000 79747000 50368000 58391000 53358000 66653000 58401000 67515000 186160000 45460 3255 40752 381406;381407;381408;381409;381410;381411;381412;381413;381414;381415;381416;381417;381418;381419;381420;381421;381422;381423;381424;381425;381426;381427;381428;381429 300870;300871;300872;300873;300874;300875;300876;300877;300878;300879;300880;300881;300882;300883;300884;300885;300886;300887;300888;300889;300890;300891;300892;300893 300885 21 SCATFSSSHR Unmodified 1138.4826 0.4825556 614 O94979 SEC31A Protein transport protein Sec31A yes yes 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 9.1116 9.2012 2 0.0035551 7319 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.064 51.909 15014000 0 0 0 1085000 946940 1511200 2145500 1016900 1266200 720710 0 1838100 2357600 2125700 0 45461 614 40753 381430;381431;381432;381433;381434;381435;381436;381437;381438;381439 300894 300894 1 SCDFLSSFR Unmodified 1117.4862 0.48624399 1344 P35237 SERPINB6 Serpin B6 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.917 74.98 2 0.003642 85854 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.401 61.183 80131000 0 0 0 1229000 2480800 2606800 1360200 2080100 2294300 3850900 9151200 10522000 4292000 11688000 28575000 45462 1344 40754 381440;381441;381442;381443;381444;381445;381446;381447;381448;381449;381450;381451 300895;300896;300897;300898;300899 300895 5 SCDFLSSFRDSCQK Unmodified 1735.7294 0.72940416 1344 P35237 SERPINB6 Serpin B6 yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 73.91 67.395 2;3 2.0417E-05 88678 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 120.53 113.93 116730000 113530000 0 3199400 0 0 0 0 0 0 0 0 0 0 0 0 45463 1344 40755 381452;381453;381454 300900;300901 300900 1 SCDGAAGLPEVPAESSSSPPGSEVASLTQPEK Unmodified 3140.4456 0.44556755 2839 Q63ZY3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 2 1 1 1 79.623 79.735 3 3.1016E-05 91935 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 29.377 23.776 52329000 0 0 0 0 5200400 0 3966300 3994500 2944000 6618100 6474400 8393800 4013300 4179300 6545000 45464 2839 40756 381455;381456;381457;381458;381459;381460;381461;381462;381463;381464;381465 300902;300903;300904;300905;300906;300907 300903 6 SCEGQNPELLPK Unmodified 1370.65 0.65001485 4577 Q9NQW6 ANLN Actin-binding protein anillin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 43.669 43.358 2 0.00035486 48432 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 96.015 85.783 156750000 0 10076000 0 11023000 10149000 13266000 10775000 11204000 10531000 12255000 16797000 14705000 17978000 0 17990000 45465 4577 40757 381466;381467;381468;381469;381470;381471;381472;381473;381474;381475;381476;381477 300908;300909;300910;300911;300912;300913;300914;300915;300916;300917 300909 10 SCENLAPFNTALK Unmodified 1463.7079 0.70786408 2244 Q13155 AIMP2 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.571 71.643 2 2.8728E-08 81649 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 137.78 101.4 180070000 0 0 0 6409900 8547600 12775000 9201100 9868900 6083500 15556000 26501000 19757000 13044000 18821000 33507000 45466 2244 40758 381478;381479;381480;381481;381482;381483;381484;381485;381486;381487;381488;381489 300918;300919;300920;300921;300922;300923;300924;300925;300926;300927;300928;300929;300930;300931;300932;300933;300934;300935;300936 300924 19 SCETDALINFFAK Unmodified 1514.7075 0.70752973 593 O94855 SEC24D Protein transport protein Sec24D yes yes 0 0 0 By MS/MS 2 0 1 1 96.285 91.464 2 0.010214 113318 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.841 62.259 8325200 0 8325200 0 0 0 0 0 0 0 0 0 0 0 0 0 45467 593 40759 381490 300937;300938 300937 2 SCEVIIGSTHVLTPK Unmodified 1639.8603 0.86034198 125 O00186 STXBP3 Syntaxin-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS 2 0 4 2 2 71.727 65.822 2;3 0.0033595 87111 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 41.482 23.069 59975000 46382000 0 13593000 0 0 0 0 0 0 0 0 0 0 0 0 45468 125 40760 381491;381492;381493;381494 300939;300940;300941 300939 2 SCEVLFNPFDDIIPREIK Unmodified 2191.0983 0.098340421 2982 Q6UX04 CWC27 Peptidyl-prolyl cis-trans isomerase CWC27 homolog yes yes 0 0 1 By MS/MS 2 0 1 1 98.418 90.288 3 1.0548E-07 116503 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.384 81.903 17638000 17638000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45469 2982 40761 381495 300942 300942 1 SCEYCFDEPLLK Unmodified 1559.6636 0.66361601 715 O96017 CHEK2 Serine/threonine-protein kinase Chk2 yes yes 0 0 0 By MS/MS 2 0 1 1 81.015 76.31 2 2.6852E-05 94993 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.23 122.06 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45470 715 40762 381496 300943 300943 1 SCFGHPLAPQALEDVK Unmodified 1767.8614 0.86140461 3259 Q8IXI1 RHOT2 Mitochondrial Rho GTPase 2 yes yes 0 0 0 By MS/MS 2 0 1 1 77.529 69.399 3 0.00095973 91483 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.83 50.779 7898400 7898400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45471 3259 40763 381497 300944 300944 1 SCGHQTSASSLK Unmodified 1261.5721 0.57209888 4498 Q9HB90 RRAGC Ras-related GTP-binding protein C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 7.8999 4.8621 3 0.034906 7387 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 32.933 21.614 24654000 15005000 7559600 2089600 0 0 0 0 0 0 0 0 0 0 0 0 45472 4498 40764 381498;381499;381500 300945 300945 1 SCGSSSHENRPLDLLHK Unmodified 1935.9221 0.92210739 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 38.265 39.01 4 0.0047306 42361 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.613 30.488 33301000 0 0 0 0 0 0 0 0 0 0 0 10202000 0 0 23099000 45473 3119 40765 381501;381502 300946 300946 0 SCGSSTPDEFPTDIPGTK Unmodified 1894.8255 0.82547262 1427 P41091 EIF2S3 Eukaryotic translation initiation factor 2 subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.812 67.894 2 1.6308E-29 77788 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 133.16 130.47 296370000 0 0 0 18326000 16878000 24235000 23772000 16306000 13143000 22890000 38608000 20115000 20870000 31902000 49321000 45474 1427 40766 381503;381504;381505;381506;381507;381508;381509;381510;381511;381512;381513;381514 300947;300948;300949;300950;300951;300952;300953;300954;300955;300956;300957;300958;300959;300960;300961 300958 15 SCINLPTVLPGSPSK Acetyl (Protein N-term) 1610.8338 0.83379288 778 P04183 TK1 Thymidine kinase, cytosolic yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 87.534 87.642 2 1.039E-10 101711 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 96.64 89.378 54706000 0 0 0 0 3953600 3882000 3152700 3598500 4444200 4196100 6076900 7924600 4256200 5194400 8027300 45475 778 40767 381515;381516;381517;381518;381519;381520;381521;381522;381523;381524;381525;381526 300962;300963;300964;300965;300966;300967;300968;300969;300970;300971;300972;300973;300974 300968 13 SCISVLK Unmodified 805.43677 0.4367746 3918 Q96LD4 TRIM47 Tripartite motif-containing protein 47 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 44.34 38.302 2 0.040529 52526 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.462 22.216 67199000 25653000 41546000 0 0 0 0 0 0 0 0 0 0 0 0 0 45476 3918 40768 381527;381528 300975 300975 1 SCLDYQTQETK Unmodified 1371.5976 0.59764493 342 O43572 AKAP10 A-kinase anchor protein 10, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 27.469 27.505 2 0.013583 29585 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 46.406 34.559 10838000 0 0 0 0 1584100 0 2649200 0 0 3607400 0 0 2997200 0 0 45477 342 40769 381529;381530;381531;381532 300976;300977 300977 2 SCLGDTLEAK Unmodified 1092.5121 0.51212439 497 O75420 GIGYF1 PERQ amino acid-rich with GYF domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 37.939 38.36 2 0.008804 42550 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 59.153 40.713 18385000 0 0 0 0 0 0 0 0 4422600 0 4126400 4323800 5512600 0 0 45478 497 40770 381533;381534;381535;381536;381537 300978;300979;300980 300978 3 SCLIVATTSGSESIK Unmodified 1551.7814 0.78142296 3246 Q8IWV7 UBR1 E3 ubiquitin-protein ligase UBR1 yes yes 0 0 0 By MS/MS 2 0 1 1 64.677 58.76 2 0.0023772 75210 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.216 69.78 36056000 0 36056000 0 0 0 0 0 0 0 0 0 0 0 0 0 45479 3246 40771 381538 300981 300981 1 SCLLHQFTEK Unmodified 1261.6125 0.61250714 1834 P61106 RAB14 Ras-related protein Rab-14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 58.799 52.249 2;3 0.00055244 70884 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.015 77.27 218540000 168280000 44181000 6073500 0 0 0 0 0 0 0 0 0 0 0 0 45480 1834 40772 381539;381540;381541;381542 300982;300983;300984;300985;300986;300987 300984 6 SCLLLQFTDK Unmodified 1223.622 0.62200919 1828 P61019;Q8WUD1 RAB2A;RAB2B Ras-related protein Rab-2A;Ras-related protein Rab-2B yes no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81.46 80.434 2 0.00033103 100860 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 133.57 107.16 183530000 73951000 56758000 5622600 579270 0 3036000 1611000 3909700 2465200 5327800 5637400 5691000 3760300 4612900 10565000 45481 1828 40773 381543;381544;381545;381546;381547;381548;381549;381550;381551;381552;381553;381554;381555;381556 300988;300989;300990;300991;300992;300993;300994 300988 7 SCLSPKPPQGQEQQGQEDEVVLVEGPTLPETPR Unmodified 3628.7679 0.76790474 3409 Q8NCF5 NFATC2IP NFATC2-interacting protein yes yes 0 0 1 By MS/MS By matching 10 0 2 1 1 78.799 78.947 3 6.0383E-05 91249 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 26.005 24.216 14534000 0 0 0 0 0 0 0 0 0 8806500 5727700 0 0 0 0 45482 3409 40774 381557;381558 300995 300995 1 SCLVEGDAK Unmodified 977.4488 0.44879585 2113 Q05209 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 18.435 18.552 2 0.010372 16960 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 64.42 44.717 65432000 0 0 0 5476200 9324100 9000300 6317800 5114300 7661400 0 0 0 9478400 8110300 4949200 45483 2113 40775 381559;381560;381561;381562;381563;381564;381565;381566;381567 300996;300997;300998;300999;301000;301001 300998 6 SCMLQADSEK Oxidation (M) 1183.4849 0.48492336 2491 Q15057;Q96P50 ACAP2;ACAP3 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2;Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3 yes no 0 1 0 By MS/MS 2 0 1 1 14.59 11.25 2 0.04741 15118 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 50.805 43.98 2651300 0 2651300 0 0 0 0 0 0 0 0 0 0 0 0 0 45484 2491 40776 381568 301002 301002 1 SCMLQADSEK Unmodified 1167.49 0.49000874 2491 Q15057;Q96P50 ACAP2;ACAP3 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2;Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3 yes no 0 0 0 By MS/MS 2 0 1 1 27.604 23.299 2 0.025165 30559 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.173 58.733 27562000 0 27562000 0 0 0 0 0 0 0 0 0 0 0 0 0 45485 2491 40776 381569 301003 301003 1 SCMLTGTPESVQSAK Oxidation (M) 1610.728 0.72800718 3737 Q96AE4 FUBP1 Far upstream element-binding protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 36.868 37.049 2 2.9598E-59 40424 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 174.42 159.45 283060000 0 0 0 13905000 10786000 14442000 12483000 8023500 14106000 21249000 28266000 59277000 28236000 26822000 45465000 45486 3737 40777 381570;381571;381572;381573;381574;381575;381576;381577;381578;381579;381580;381581;381582 301004;301005;301006;301007;301008;301009;301010;301011;301012;301013;301014;301015;301016 301014 5310 13 SCMLTGTPESVQSAK Unmodified 1594.7331 0.73309256 3737 Q96AE4 FUBP1 Far upstream element-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 47.709 47.416 2 5.5906E-50 59776 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 163.78 144.54 480260000 0 20435000 0 15197000 11896000 18831000 19373000 14286000 16101000 37070000 71877000 58699000 31951000 58430000 106120000 45487 3737 40777 381583;381584;381585;381586;381587;381588;381589;381590;381591;381592;381593;381594;381595 301017;301018;301019;301020;301021;301022;301023;301024;301025;301026;301027;301028;301029;301030 301021 14 SCNCLLLK Unmodified 1006.494 0.49397191 827 P06733 ENO1 Alpha-enolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.83 3.67 3 1 2 1 2 1 1 1 49.104 45.365 2 0.008855 58909 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.6 80.806 7355500000 706280000 6450600000 126360000 41308000 0 0 0 0 0 0 0 0 0 0 30951000 45488 827 40778 381596;381597;381598;381599;381600;381601 301031;301032;301033;301034;301035;301036;301037;301038 301031 7 SCNEQIEESEK Unmodified 1351.5562 0.55617405 4030 Q99590 SCAF11 Protein SCAF11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.033 14.196 2 4.7388E-05 13037 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 115.78 100.17 41217000 0 0 0 2581800 2688700 1887400 2337000 1676000 2013500 3984500 4194000 4718300 4336700 5165500 5633700 45489 4030 40779 381602;381603;381604;381605;381606;381607;381608;381609;381610;381611;381612;381613 301039;301040;301041;301042;301043;301044;301045;301046;301047;301048;301049 301041 11 SCPETLTHAVGMSESPIGPK Unmodified 2096.9871 0.98707541 2854 Q68CZ2 TNS3 Tensin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 67.581 67.261 3 8.2666E-05 86932 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 44.047 39.242 90854000 0 28639000 0 2357100 2866700 5519500 3396200 3976000 3285900 5719400 6650100 8005200 4026700 5614700 10798000 45490 2854 40780 381614;381615;381616;381617;381618;381619;381620;381621;381622;381623;381624;381625;381626 301050;301051;301052;301053;301054;301055;301056;301057;301058;301059 301051 9 SCPETLTHAVGMSESPIGPK Oxidation (M) 2112.982 0.98199003 2854 Q68CZ2 TNS3 Tensin-3 yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 56.659 56.446 3 3.7301E-05 64026 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 50.87 43.158 11707000 0 0 0 0 5261200 0 6445900 0 0 0 0 0 0 0 0 45491 2854 40780 381627;381628 301060;301061 301060 4513 2 SCPNPGEIR Unmodified 1028.4709 0.47092828 859 P08174 CD55 Complement decay-accelerating factor yes yes 0 0 0 By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 22.993 23.207 2 0.033064 23789 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 47.082 26.8 79761000 0 0 0 0 4106000 6910900 5661700 5694400 4527200 7120200 0 8772300 13699000 10857000 12412000 45492 859 40781 381629;381630;381631;381632;381633;381634;381635;381636;381637;381638 301062 301062 1 SCPSTPSSGATVDSGK Unmodified 1536.6726 0.67260079 3065 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 19.676 19.941 2 0.0024033 20434 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 48.004 42.032 18552000 0 0 0 0 1670700 2288100 0 0 2248300 2503300 2178700 3475300 2245700 0 1941500 45493 3065 40782 381639;381640;381641;381642;381643;381644;381645;381646 301063;301064;301065;301066;301067;301068 301064 6 SCQAQPTTMAR Oxidation (M) 1265.5493 0.54925495 62 CON__P02668 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 8.3606 8.489 2 0.0050849 7094 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 53.327 41.837 + 45222000 0 0 0 0 4213600 0 23779000 1318500 0 1590500 11163000 3156900 0 0 0 45494 62 40783 381647;381648;381649;381650;381651;381652 301069;301070;301071 301069 69 3 SCQAQPTTMAR Unmodified 1249.5543 0.55434033 62 CON__P02668 yes yes 0 0 0 By MS/MS 10 0 1 1 17.733 17.708 2 0.0052335 17873 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 75.294 56.023 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45495 62 40783 381653 301072 301072 1 SCQFSVDEEFQK Unmodified 1502.6348 0.63475872 1242 P29084 GTF2E2 Transcription initiation factor IIE subunit beta yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 8 3.46 1 3 1 1 1 1 61.009 59.845 2 2.0444E-14 75279 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 142.83 127.56 126420000 0 112320000 0 0 0 0 0 0 0 3248000 0 5269400 0 0 5577500 45496 1242 40784 381654;381655;381656;381657 301073;301074;301075;301076 301074 4 SCQFVAVR Unmodified 965.47529 0.47528537 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.217 38.396 2 0.0060433 42334 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 104.21 78.59 199410000 0 0 0 13596000 10264000 13291000 13440000 6300800 12467000 12890000 21648000 17295000 21685000 26060000 30478000 45497 848 40785 381658;381659;381660;381661;381662;381663;381664;381665;381666;381667;381668;381669 301077;301078;301079;301080;301081;301082;301083;301084;301085;301086;301087 301082 11 SCQFVAVRR Unmodified 1121.5764 0.5763964 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 28.745 29.07 2 0.025045 30958 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 91.853 62.437 69425000 0 0 0 0 0 0 0 3369000 6554200 10377000 11745000 0 11614000 11185000 14581000 45498 848 40786 381670;381671;381672;381673;381674;381675;381676 301088 301088 1 SCQISCK Acetyl (Protein N-term) 923.38409 0.3840871 79 CON__P35908v2;P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 18.425 18.598 2 0.011111 18625 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 71.296 53.529 + 160380000 0 0 0 71781000 18616000 14537000 0 11495000 0 10736000 0 7412500 19216000 0 6587400 45499 79 40787 381677;381678;381679;381680;381681;381682;381683;381684 301089;301090;301091;301092;301093;301094;301095 301092 7 SCRLFNPNDDGK Unmodified 1421.6358 0.63576177 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 39.315 34.259 3 0.03111 47860 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.448 49.296 117310000 113940000 0 3372400 0 0 0 0 0 0 0 0 0 0 0 0 45500 4226 40788 381685;381686 301096 301096 0 SCSFSSESR Unmodified 1045.4135 0.41347298 2830 Q5VZ89 DENND4C DENN domain-containing protein 4C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 13.135 13.305 2 0.034875 12578 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 46.334 39.104 40448000 0 0 0 2407900 2876500 2925200 0 3208000 2510800 3564100 4336300 5068200 6111100 3512600 3926700 45501 2830 40789 381687;381688;381689;381690;381691;381692;381693;381694;381695;381696;381697 301097 301097 1 SCSGSGADPEAAPASAASAPGPAPPVSAPAALPSSTAAENK Acetyl (Protein N-term) 3715.7272 0.72716214 2214 Q12962 TAF10 Transcription initiation factor TFIID subunit 10 yes yes 1 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.2 3.6 1 4 1 1 1 1 1 82.581 83.704 3;4 1.9997E-45 90957 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.219 58.384 63611000 31719000 0 0 0 0 5188500 0 0 0 8140800 0 12313000 6250400 0 0 45502 2214 40790 381698;381699;381700;381701;381702 301098;301099;301100;301101 301101 4 SCSGVEFSTSGSSNTDTGK Unmodified 1906.7851 0.78506437 1485 P45880 VDAC2 Voltage-dependent anion-selective channel protein 2 yes yes 0 0 0 By MS/MS 10 0 1 1 34.94 34.508 2 0.0023802 38365 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 56.122 56.122 4566400 0 0 0 4566400 0 0 0 0 0 0 0 0 0 0 0 45503 1485 40791 381703 301102 301102 1 SCSLLSLATIK Unmodified 1191.6533 0.65330932 2979 Q6UWE0 LRSAM1 E3 ubiquitin-protein ligase LRSAM1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 88.647 82.161 2 0.00073551 105057 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.143 72.823 25200000 13495000 11705000 0 0 0 0 0 0 0 0 0 0 0 0 0 45504 2979 40792 381704;381705 301103;301104 301104 2 SCSPELQQK Unmodified 1075.4968 0.49680868 1033 P16152 CBR1 Carbonyl reductase [NADPH] 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 14.474 14.057 2 0.00094001 16362 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 143.11 123.63 155000000 45418000 39726000 0 2952600 0 1148100 1951200 1841800 1381600 2884300 9865700 7480900 2296700 10199000 27855000 45505 1033 40793 381706;381707;381708;381709;381710;381711;381712;381713;381714;381715;381716;381717;381718 301105;301106;301107;301108;301109 301105 4 SCSQEERIEFYELDK Unmodified 1931.8571 0.8571071 272 O15305 PMM2 Phosphomannomutase 2 yes yes 0 0 1 By MS/MS 10 0 1 1 65.42 65.972 3 0.013084 74834 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.265 22.889 7458000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7458000 45506 272 40794 381719 301110 301110 1 SCSTEQPLTSTK Unmodified 1337.6133 0.613295 2649 Q2KHR3 QSER1 Glutamine and serine-rich protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.978 20.179 2 0.0046235 20884 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 68.893 60.361 51834000 0 0 0 2788000 3542900 3421000 3496800 3134300 2862400 4792500 4771600 6645000 3964000 4579900 7835900 45507 2649 40795 381720;381721;381722;381723;381724;381725;381726;381727;381728;381729;381730;381731 301111;301112;301113;301114;301115;301116;301117;301118 301113 8 SCTDVTEYAVQR Unmodified 1427.6351 0.63509307 4363 Q9H2D6 TRIOBP TRIO and F-actin-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 44.167 44.263 2 0.0013415 48654 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.533 75.01 21197000 0 0 0 0 4805200 5245300 0 0 0 0 0 0 0 0 11146000 45508 4363 40796 381732;381733;381734 301119;301120;301121 301120 3 SCTLARDPTTGK Unmodified 1305.6347 0.63469914 4912 Q9UHX1 PUF60 Poly(U)-binding-splicing factor PUF60 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.17 2.44 3 26 1 1 1 2 2 2 2 2 3 2 2 2 3 2 2 17.462 17.238 2;3 3.8175E-35 16333 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 191.53 167.5 1421300000 10239000 103780000 2762300 83414000 50382000 84895000 74989000 49286000 75907000 79382000 99577000 185070000 167310000 141950000 212360000 45509 4912 40797 381735;381736;381737;381738;381739;381740;381741;381742;381743;381744;381745;381746;381747;381748;381749;381750;381751;381752;381753;381754;381755;381756;381757;381758;381759;381760;381761;381762;381763 301122;301123;301124;301125;301126;301127;301128;301129;301130;301131;301132;301133;301134;301135;301136;301137;301138;301139;301140;301141;301142;301143;301144;301145;301146;301147;301148 301133 14 SCTPYELRTIDVFDGNSGK Unmodified 2158.0001 8.29396E-05 3607 Q92466 DDB2 DNA damage-binding protein 2 yes yes 0 0 1 By MS/MS 2 0 1 1 81.546 79.056 3 0.016596 95812 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 31.625 28.184 8669100 0 0 8669100 0 0 0 0 0 0 0 0 0 0 0 0 45510 3607 40798 381764 301149 301149 1 SCTQSATAPQQEADAEVNTETLNK Unmodified 2592.161 0.16095327 5005 Q9ULU4 ZMYND8 Protein kinase C-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 50.504 50.191 3 0.001534 57216 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 18.904 15.506 15442000 0 0 0 4501000 5303500 0 0 0 0 0 0 0 0 5637300 0 45511 5005 40799 381765;381766;381767 301150 301150 1 SCTWPLQRPELQASPAK Unmodified 1967.9887 0.98873039 340 O43524 FOXO3 Forkhead box protein O3 no no 0 0 1 By matching By MS/MS By MS/MS 10 0 3 1 1 1 67.775 68.032 3 0.002373 77309 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.454 32.51 23550000 0 0 0 0 0 0 0 0 0 6259900 0 0 4172200 0 13118000 45512 340 40800 381768;381769;381770 301151;301152 301151 2 SCVEEPEPEPEAAEGDGDK Unmodified 2043.8215 0.82150945 1674 P51858 HDGF Hepatoma-derived growth factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.47 3.88 4 5 21 4 5 2 2 1 2 2 2 1 2 2 1 2 2 47.762 47.359 2;3 2.3023E-95 40909 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 180.09 180.09 1844700000 320070000 904710000 0 27045000 23460000 15847000 18306000 37465000 17636000 22832000 90478000 79410000 24991000 54018000 208420000 45513 1674 40801 381771;381772;381773;381774;381775;381776;381777;381778;381779;381780;381781;381782;381783;381784;381785;381786;381787;381788;381789;381790;381791;381792;381793;381794;381795;381796;381797;381798;381799;381800 301153;301154;301155;301156;301157;301158;301159;301160;301161;301162;301163;301164;301165;301166;301167;301168;301169;301170;301171;301172;301173;301174 301169 20 SCVEEPEPEPEAAEGDGDKK Unmodified 2171.9165 0.91647247 1674 P51858 HDGF Hepatoma-derived growth factor yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.16 3.73 5 2 12 4 3 1 1 1 1 1 1 1 1 1 1 1 1 33.58 31.67 2;3 1.4887E-28 35634 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 83.423 79.875 1143600000 163590000 455630000 0 23359000 20360000 8878500 15496000 30782000 10124000 26238000 120530000 72541000 18456000 40754000 136870000 45514 1674 40802 381801;381802;381803;381804;381805;381806;381807;381808;381809;381810;381811;381812;381813;381814;381815;381816;381817;381818;381819 301175;301176;301177;301178;301179;301180;301181;301182;301183;301184;301185;301186;301187;301188;301189;301190;301191;301192;301193;301194;301195;301196;301197 301197 22 SCVLFNCAALASQIAAEQNLDNDEGLK Unmodified 2950.3801 0.38007094 3549 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 94.94 91.422 3 8.3462E-40 109349 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 105.03 97.75 25931000 0 20580000 5350100 0 0 0 0 0 0 0 0 0 0 0 0 45515 3549 40803 381820;381821;381822 301198;301199;301200;301201 301200 4 SCVPLNTNELNSNENIHYK Unmodified 2245.0433 0.043344738 2164 Q08AD1 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 67.343 62.04 3 6.3843E-52 79532 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 135.27 126.62 91802000 0 91802000 0 0 0 0 0 0 0 0 0 0 0 0 0 45516 2164 40804 381823;381824 301202;301203;301204;301205 301202 4 SDAALQQLR Unmodified 1000.5302 0.53015772 270 O15287 FANCG Fanconi anemia group G protein yes yes 0 0 0 By MS/MS 10 0 1 1 36.419 36.426 2 0.040952 40383 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 62.107 36.168 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45517 270 40805 381825 301206 301206 1 SDAAVDTSSEITTK Acetyl (Protein N-term) 1465.6784 0.67839767 821 P06454 PTMA Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.49 4.07 6 13 2 28 11 7 3 1 3 2 2 1 1 2 7 1 4 2 2 53.805 53.12 2 1.0907E-54 55481 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 193.28 167.24 26040000000 8657400000 452220000 65482000 851770000 793740000 683030000 1059200000 1448300000 754290000 985040000 2578300000 1896800000 1603700000 1143500000 3066900000 45518 821 40806 381826;381827;381828;381829;381830;381831;381832;381833;381834;381835;381836;381837;381838;381839;381840;381841;381842;381843;381844;381845;381846;381847;381848;381849;381850;381851;381852;381853;381854;381855;381856;381857;381858;381859;381860;381861;381862;381863;381864;381865;381866;381867;381868;381869;381870;381871;381872;381873;381874 301207;301208;301209;301210;301211;301212;301213;301214;301215;301216;301217;301218;301219;301220;301221;301222;301223;301224;301225;301226;301227;301228;301229;301230;301231;301232;301233;301234;301235;301236;301237;301238;301239;301240;301241;301242;301243;301244;301245;301246;301247;301248;301249;301250;301251;301252;301253;301254;301255;301256;301257;301258;301259;301260;301261;301262;301263;301264;301265;301266;301267;301268;301269;301270;301271;301272;301273;301274;301275;301276;301277;301278;301279;301280;301281;301282;301283;301284;301285;301286;301287;301288;301289;301290 301269 83 SDAAVDTSSEITTK Unmodified 1423.6678 0.66783299 821 P06454 PTMA Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 3.75 3.63 1 2 1 1 2 1 35.272 29.72 2 1.8815E-19 101905 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 151.1 126.32 20345000 9557100 10787000 0 0 0 0 0 0 0 0 0 0 0 0 0 45519 821 40806 381875;381876;381877;381878 301291;301292;301293;301294 301294 4 SDAAVDTSSEITTKDLK Acetyl (Protein N-term) 1821.8844 0.8843677 821 P06454 PTMA Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1 yes yes 1 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 59.95 59.273 2 1.1957E-36 67926 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 131.06 121.95 46049000 3751100 0 0 0 0 1880500 4507900 3623200 2912100 0 10240000 5484600 5077400 0 8571700 45520 821 40807 381879;381880;381881;381882;381883;381884;381885;381886;381887;381888 301295;301296;301297;301298;301299;301300;301301;301302;301303 301299 9 SDADENVSASDK Unmodified 1236.5106 0.51060406 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 8.8078 8.9139 2 3.7128E-09 7400 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 142.83 130.78 18111000 0 0 0 0 0 4817000 5061000 0 0 0 0 0 0 0 8232800 45521 3676 40808 381889;381890;381891 301304;301305 301304 2 SDADENVSASDKR Unmodified 1392.6117 0.61171509 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.3779 7.506 3 0.0041815 6031 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 31.656 18.148 38949000 0 0 0 1781600 2746500 1736600 2344200 1865500 1864100 3483000 10908000 4120700 2642600 2386600 3069400 45522 3676 40809 381892;381893;381894;381895;381896;381897;381898;381899;381900;381901;381902;381903 301306;301307;301308;301309;301310 301310 5 SDAEEDGGTVSQEEEDRKPK Unmodified 2204.9669 0.96692814 1227 P27824 CANX Calnexin yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 1 2 2 2 2 2 1 2 2 2 2 19.055 19.272 3;4 3.3851E-60 19642 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 131.71 127 325710000 0 0 0 16445000 14325000 32608000 16153000 20307000 16847000 44314000 24216000 65187000 24567000 18936000 31808000 45523 1227 40810 381904;381905;381906;381907;381908;381909;381910;381911;381912;381913;381914;381915;381916;381917;381918;381919;381920;381921;381922;381923;381924 301311;301312;301313;301314;301315;301316;301317;301318;301319;301320;301321;301322;301323;301324;301325;301326;301327 301313 12 SDAEYTNSPLVPTFCTPGLK Unmodified 2196.0409 0.040885122 3256 Q8IX90 SKA3 Spindle and kinetochore-associated protein 3 yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 90.605 84.119 2 1.7394E-09 104258 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 111.74 102.85 23397000 3290600 20107000 0 0 0 0 0 0 0 0 0 0 0 0 0 45524 3256 40811 381925;381926 301328 301328 1 SDAGWYTLSAK Unmodified 1197.5666 0.5666028 3134 Q86TC9 MYPN Myopalladin yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 61.54 61.149 2 0.00073559 68976 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.108 82.463 147210000 0 55201000 0 4952300 0 6158900 0 12303000 3886900 10647000 10169000 9039900 11609000 8415600 14825000 45525 3134 40812 381927;381928;381929;381930;381931;381932;381933;381934;381935;381936;381937 301329;301330;301331;301332;301333;301334;301335;301336;301337;301338;301339 301332 11 SDALETLGFLNHYQMK Oxidation (M) 1881.8931 0.89309867 1008 P14866 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 6 4 3 3 1 1 1 1 1 1 85.274 82.768 2;3 6.0857E-24 95475 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 122.69 109.26 354010000 134870000 193740000 9551700 0 0 2703700 0 0 2711700 0 0 0 0 0 10438000 45526 1008 40813 381938;381939;381940;381941;381942;381943 301340;301341;301342;301343 301341 1383 3 SDALETLGFLNHYQMK Unmodified 1865.8982 0.89818405 1008 P14866 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 89.156 86.76 3 3.962E-06 108763 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.939 77.121 184140000 0 175820000 1563000 0 0 0 0 0 0 0 0 0 0 0 6749100 45527 1008 40813 381944;381945;381946 301344;301345;301346;301347 301345 4 SDALGHILPQLGK Unmodified 1347.751 0.75104953 4099 Q9BQK8 LPIN3 Phosphatidate phosphatase LPIN3 yes yes 0 0 0 By MS/MS 2 0 1 1 84.164 76.033 3 0.015492 99332 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.549 38.047 6322300 6322300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45528 4099 40814 381947 301348 301348 1 SDANNFLILFR Unmodified 1308.6826 0.68263561 2164 Q08AD1 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 92.431 92.549 2 0.0052329 107458 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 69.954 56.917 15846000 0 0 0 0 0 2291600 0 0 0 3788700 2137100 1929100 0 1182100 4517000 45529 2164 40815 381948;381949;381950;381951;381952;381953 301349;301350;301351;301352;301353 301349 5 SDAPDTLLLEK Unmodified 1200.6238 0.62378333 1719 P53611 RABGGTB Geranylgeranyl transferase type-2 subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 66.227 64.761 2 0.00018649 74392 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 107.79 77.224 1902200000 37710000 1551200000 5374000 17602000 14819000 22818000 16658000 15062000 18154000 28434000 46773000 49779000 34453000 43402000 0 45530 1719 40816 381954;381955;381956;381957;381958;381959;381960;381961;381962;381963;381964;381965;381966;381967;381968 301354;301355;301356;301357;301358;301359;301360;301361;301362;301363;301364;301365;301366;301367;301368;301369;301370 301356 16 SDAPTGDVLLDEALK Unmodified 1542.7777 0.77771779 4396 Q9H4A6 GOLPH3 Golgi phosphoprotein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 82.229 81.111 2 3.0066E-10 100363 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.37 120.61 628740000 15667000 419950000 1810000 4496100 10366000 17752000 8037300 13915000 8919300 22572000 30313000 20052000 11739000 14955000 28188000 45531 4396 40817 381969;381970;381971;381972;381973;381974;381975;381976;381977;381978;381979;381980;381981;381982;381983;381984 301371;301372;301373;301374;301375;301376;301377;301378;301379;301380;301381;301382;301383;301384;301385;301386;301387;301388 301376 18 SDAPTSSSFFTGLK Unmodified 1443.6882 0.6881745 4798 Q9P0V3 SH3BP4 SH3 domain-binding protein 4 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 75.693 75.651 2 0.02798 87171 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 44.612 34.38 21175000 0 0 0 3423300 2275500 0 3211600 3200600 3109400 0 0 0 5954500 0 0 45532 4798 40818 381985;381986;381987;381988;381989;381990;381991 301389;301390 301389 2 SDASPSSIR Unmodified 918.44067 0.44067401 1333 P33992 MCM5 DNA replication licensing factor MCM5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 14.128 13.708 2 0.010574 12581 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 104.06 74.907 464690000 0 303020000 0 9773100 9401000 0 11871000 10031000 8876500 0 28821000 23010000 15490000 17853000 26543000 45533 1333 40819 381992;381993;381994;381995;381996;381997;381998;381999;382000;382001;382002;382003 301391;301392;301393;301394;301395;301396;301397;301398 301395 1 SDASPSSIRSLK Unmodified 1246.6517 0.65172941 1333 P33992 MCM5 DNA replication licensing factor MCM5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 6 2 3 2 3 34.162 29.56 2;3 1.741E-13 37883 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 140.78 117.26 1192100000 872930000 128330000 190880000 0 0 0 0 0 0 0 0 0 0 0 0 45534 1333 40820 382004;382005;382006;382007;382008;382009;382010;382011 301399;301400;301401;301402;301403;301404;301405;301406 301405 7 SDASSDQGPASPEK Unmodified 1374.5899 0.58991702 2867 Q6BDS2 UHRF1BP1 UHRF1-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 9.9261 10.057 2 3.3591E-05 8908 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 101.95 90.803 27046000 0 0 0 1205800 1585600 2188400 2240500 2105500 1814700 2203500 2718700 3484500 2905900 2584400 2008200 45535 2867 40821 382012;382013;382014;382015;382016;382017;382018;382019;382020;382021;382022;382023 301407;301408;301409;301410;301411;301412;301413;301414;301415;301416 301409 10 SDATADDLIDVVEGNR Unmodified 1688.7853 0.78532236 5092 Q9Y295 DRG1 Developmentally-regulated GTP-binding protein 1 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 83.181 83.35 2 0.018491 96806 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 41.092 26.857 10053000 0 0 0 0 0 0 0 0 0 0 4592400 5460100 0 0 0 45536 5092 40822 382024;382025 301417 301417 1 SDATQNAHGTGISK Unmodified 1385.6535 0.65352033 5062 Q9UPW0 FOXJ3 Forkhead box protein J3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 8.5311 8.127 3 0.0010546 5838 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 56.29 38.923 182400000 0 76523000 0 0 0 4695200 6017700 6471200 6443600 9337500 30316000 10945000 9912000 10428000 11306000 45537 5062 40823 382026;382027;382028;382029;382030;382031;382032;382033;382034;382035;382036;382037 301418;301419;301420;301421;301422;301423;301424;301425;301426;301427 301423 10 SDATSGILNSTNIQS Unmodified 1506.7162 0.71618016 350 O43663 PRC1 Protein regulator of cytokinesis 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 64.929 65.208 2 0.0045089 74047 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.308 37.667 18007000 0 0 0 0 0 0 0 0 0 5428400 0 0 5087800 0 7491100 45538 350 40824 382038;382039;382040 301428;301429;301430 301429 3 SDAYYCTGDVTAWTK Unmodified 1736.7352 0.73520105 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 70.687 70.043 2 5.8894E-10 80681 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 95.401 89.908 804580000 0 754300000 0 0 0 0 3611000 3426400 3592800 3471100 5907400 9041600 4494800 4523000 12214000 45539 894 40825 382041;382042;382043;382044;382045;382046;382047;382048;382049;382050;382051;382052 301431;301432;301433;301434;301435;301436;301437;301438;301439;301440;301441;301442 301442 12 SDCYTELEK Acetyl (Protein N-term) 1185.486 0.48596922 3837 Q96FQ6 S100A16 Protein S100-A16 yes yes 1 0 0 By MS/MS 2 0 1 1 52.032 44.071 2 0.048546 60781 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.598 42.344 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45540 3837 40826 382053 301443 301443 1 SDDAGDTLATGDK Acetyl (Protein N-term) 1306.5525 0.55246888 3239 Q8IWE2 FAM114A1 Protein NOXP20 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.31 2.4 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 36.134 36.709 2 1.5904E-08 36162 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 103.34 83.012 112900000 3759800 0 0 6725000 5343700 8446500 6295400 9023600 6036900 12060000 10788000 11184000 11297000 7197700 14739000 45541 3239 40827 382054;382055;382056;382057;382058;382059;382060;382061;382062;382063;382064;382065;382066 301444;301445;301446;301447;301448;301449;301450;301451;301452;301453;301454;301455;301456;301457;301458;301459;301460 301446 17 SDDDFADFHSSK Unmodified 1369.5422 0.54223854 5023 Q9UMZ2 SYNRG Synergin gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.609 38.789 3 0.049948 42924 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 21.351 18.232 71023000 0 0 0 4462600 3258100 5548800 4455900 3700800 4425600 4843400 6503800 9037300 5990400 5299200 13497000 45542 5023 40828 382067;382068;382069;382070;382071;382072;382073;382074;382075;382076;382077;382078 301461 301461 1 SDDDTSNFDEPEK Unmodified 1497.5743 0.57432653 189 O14578 CIT Citron Rho-interacting kinase yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 27.213 27.353 2 0.0059487 28543 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.672 66.416 18520000 0 0 0 0 1504200 2819800 2334300 2003300 0 2215900 2721600 0 2498500 2422700 0 45543 189 40829 382079;382080;382081;382082;382083;382084;382085;382086;382087 301462;301463 301462 2 SDDELLSSK Unmodified 992.46622 0.46622005 3432 Q8NEY1 NAV1 Neuron navigator 1 yes yes 0 0 0 By matching By matching By MS/MS By matching 10 0 4 1 1 1 1 28.54 28.444 2 0.013868 30506 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 59.153 42.226 19083000 0 0 0 3994800 3091000 0 0 0 6222500 5775100 0 0 0 0 0 45544 3432 40830 382088;382089;382090;382091 301464 301464 1 SDDILEEGEK Unmodified 1133.5088 0.50881315 3072 Q7Z2T5 TRMT1L TRMT1-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 36.127 36.223 2 0.010322 38764 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 56.209 41.569 27854000 0 0 0 2940700 2992200 0 0 0 2430600 0 0 0 7050800 5848300 6591400 45545 3072 40831 382092;382093;382094;382095;382096;382097 301465;301466;301467;301468;301469;301470 301467 6 SDDNSYDEK Unmodified 1071.3993 0.3992627 1580 P49591 SARS Serine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS 1 0 2 1 1 106.52 111.78 2 3.5773E-23 92454 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 203.02 180.89 66635000 66635000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45546 1580 40832 382098;382099 301471;301472 301471 2 SDDPMPFDIK Oxidation (M) 1179.5118 0.51179004 548 O75828 CBR3 Carbonyl reductase [NADPH] 3 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 59.611 54.272 2 0.036904 69524 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 54.066 47.895 25722000 0 25722000 0 0 0 0 0 0 0 0 0 0 0 0 0 45547 548 40833 382100;382101 301473 301473 1 SDDYLPSIEQQPQQK Unmodified 1774.8374 0.83735793 4814 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 61.573 61.661 2 4.6489E-05 70303 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 76.332 42.331 110650000 0 0 0 0 15175000 15511000 16663000 20288000 14068000 0 0 0 0 0 28947000 45548 4814 40834 382102;382103;382104;382105;382106;382107 301474;301475;301476;301477;301478 301477 5 SDDYMPMSPASVSAPK Oxidation (M) 1697.7277 0.72767283 5203 Q9Y4H2 IRS2 Insulin receptor substrate 2 yes yes 0 1 0 By matching By MS/MS 10 0 2 1 1 54.752 54.81 2 0.0015833 61563 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.004 38.317 9627400 0 0 0 0 3316400 0 0 0 0 0 0 0 0 0 6311000 45549 5203 40835 382108;382109 301479 301479 6601 1 SDDYMPMSPASVSAPK Unmodified 1681.7328 0.73275821 5203 Q9Y4H2 IRS2 Insulin receptor substrate 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 67.938 68.12 2 0.0012854 77442 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.456 60.328 22343000 0 0 0 0 0 4426700 0 0 0 4064400 0 0 3607200 0 10244000 45550 5203 40835 382110;382111;382112;382113;382114 301480;301481;301482 301480 3 SDEAVKPFGLK Unmodified 1189.6343 0.63428844 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 46.728 46.894 2;3 0.00018346 52064 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 138.08 98.012 1955000000 0 0 0 81474000 75466000 190120000 114950000 100320000 53896000 189320000 207500000 228330000 139440000 214820000 359360000 45551 1565 40836 382115;382116;382117;382118;382119;382120;382121;382122;382123;382124;382125;382126;382127;382128;382129;382130;382131;382132;382133;382134;382135;382136;382137;382138 301483;301484;301485;301486;301487;301488;301489;301490;301491;301492;301493;301494;301495;301496;301497;301498 301496 10 SDEDDWSK Unmodified 980.37232 0.37231967 170 O00571 DDX3X ATP-dependent RNA helicase DDX3X yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.239 15.41 2 0.030702 14688 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 55.37 55.37 57331000 0 0 0 3705500 2966500 4449600 3876300 3750100 3063700 4691700 5843400 4824600 6618000 4977300 8564000 45552 170 40837 382139;382140;382141;382142;382143;382144;382145;382146;382147;382148;382149;382150 301499;301500;301501;301502 301500 4 SDEDEERVHEEL Unmodified 1485.6219 0.62194543 3744 Q96AY3 FKBP10 Peptidyl-prolyl cis-trans isomerase FKBP10 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.61 3 1 2 2 23 3 2 2 2 2 2 2 2 2 2 2 2 2 1 34.564 33.213 2;3 1.9085E-13 44050 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 139.86 124.92 653590000 218820000 138540000 0 11980000 10776000 51486000 19689000 12808000 13268000 29401000 45942000 36178000 21536000 31600000 11567000 45553 3744 40838 382151;382152;382153;382154;382155;382156;382157;382158;382159;382160;382161;382162;382163;382164;382165;382166;382167;382168;382169;382170;382171;382172;382173;382174;382175;382176;382177;382178 301503;301504;301505;301506;301507;301508;301509;301510;301511 301507 5 SDEEEQQYVIK Unmodified 1366.6252 0.62523989 5196 Q9Y4E5 ZNF451 Zinc finger protein 451 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 37.613 37.847 2 0.0078435 40747 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 68.846 60.152 19194000 0 0 0 0 3417400 1923900 0 0 0 0 3486500 3249000 3924200 3193500 0 45554 5196 40839 382179;382180;382181;382182;382183;382184;382185 301512;301513;301514 301513 3 SDEFSLADALPEHSPAK Acetyl (Protein N-term) 1854.8636 0.86357268 3416 Q8NDC0 MAPK1IP1L MAPK-interacting and spindle-stabilizing protein-like yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.08 3.33 4 2 18 1 5 1 1 1 2 1 2 2 1 1 2 2 2 83.078 82.028 2;3 2.2679E-147 101371 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 284.15 260.78 4462600000 82055000 3531500000 0 10014000 14247000 14855000 21286000 19669000 19735000 37497000 82965000 94643000 24866000 148830000 360420000 45555 3416 40840 382186;382187;382188;382189;382190;382191;382192;382193;382194;382195;382196;382197;382198;382199;382200;382201;382202;382203;382204;382205;382206;382207;382208;382209 301515;301516;301517;301518;301519;301520;301521;301522;301523;301524;301525;301526;301527;301528;301529;301530;301531;301532;301533 301519 18 SDEGHPFR Unmodified 943.41479 0.41479361 4566 Q9NQC3 RTN4 Reticulon-4 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 10.344 10.461 2 0.012197 9168 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 75.189 43.234 38163000 0 0 0 4007000 3163100 2592600 4015100 2532400 2430900 3494400 0 5971300 4061700 2168900 3725900 45556 4566 40841 382210;382211;382212;382213;382214;382215;382216;382217;382218;382219;382220 301534 301534 1 SDEGLPDGLSTK Unmodified 1217.5776 0.57756142 3414 Q8ND24 RNF214 RING finger protein 214 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 48.417 48.484 2 0.0039332 54690 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 72.478 37.156 188630000 0 0 0 17319000 16331000 0 21103000 18999000 14617000 0 0 0 26928000 25023000 48306000 45557 3414 40842 382221;382222;382223;382224;382225;382226;382227;382228;382229 301535;301536;301537 301536 3 SDEGQLSPATR Unmodified 1159.5469 0.54692999 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 21.101 21.34 2 0.00029757 21745 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 90.108 70.331 68023000 0 0 0 0 5879700 5498400 6836500 3282900 3763800 6869800 6992600 8918400 6947700 6196700 6836200 45558 2501 40843 382230;382231;382232;382233;382234;382235;382236;382237;382238;382239;382240 301538;301539;301540;301541;301542;301543;301544;301545;301546;301547;301548;301549 301548 11 SDEISFADFK Unmodified 1157.5241 0.52406928 2484 Q15042 RAB3GAP1 Rab3 GTPase-activating protein catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75.809 74.823 2 0.0074378 86819 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 62.463 54.243 301760000 14707000 189830000 1765200 5050100 7061600 8150300 5399900 5896600 6389700 7656900 8541100 10166000 9183200 6932300 15029000 45559 2484 40844 382241;382242;382243;382244;382245;382246;382247;382248;382249;382250;382251;382252;382253;382254;382255 301550;301551;301552;301553;301554;301555;301556;301557;301558;301559;301560;301561;301562 301559 13 SDELREAWR Unmodified 1160.5574 0.5574351 947 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 1 1 1 1 1 2 2 2 2 2 2 38.19 38.463 2;3 0.009288 43376 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 52.278 31.975 266480000 0 0 0 9803200 5243800 12078000 8011800 7431300 7183000 18975000 41013000 27765000 15281000 29099000 84597000 45560 947 40845 382256;382257;382258;382259;382260;382261;382262;382263;382264;382265;382266;382267;382268;382269;382270;382271;382272;382273 301563;301564;301565;301566;301567;301568 301568 3 SDEMNVK Unmodified 821.35892 0.35891821 1813 P60660 MYL6 Myosin light polypeptide 6 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 9.6092 9.6988 2 0.02342 7921 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 100.07 70.728 82338000 0 0 0 6791700 12327000 11467000 14143000 12927000 7282200 2917500 0 6946500 4463900 3072100 0 45561 1813 40846 382274;382275;382276;382277;382278;382279;382280;382281;382282;382283 301569;301570;301571;301572;301573;301574 301572 5 SDENEDPSVVGEFK Unmodified 1550.6736 0.67364665 4773 Q9NZM1 MYOF Myoferlin yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 55.18 55.369 2 0.0012017 62551 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.301 47.49 25253000 0 0 0 0 2268000 0 1912200 3203400 2789100 4668800 0 6363900 0 0 4047300 45562 4773 40847 382284;382285;382286;382287;382288;382289;382290 301575;301576;301577;301578;301579 301578 5 SDEPARDDAAVETAEEAK Unmodified 1902.8443 0.8442938 2965 Q6QNY1 BLOC1S2 Biogenesis of lysosome-related organelles complex 1 subunit 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 34.652 34.767 3 0.0017777 38197 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 41.513 34.784 24727000 0 0 0 2289000 0 0 2660000 1759600 5007600 0 7717100 0 0 5294000 0 45563 2965 40848 382291;382292;382293;382294;382295;382296 301580 301580 1 SDEREVAEAATGEDASSPPPK Acetyl (Protein N-term) 2183.9818 0.98184992 4019 Q99536 VAT1 Synaptic vesicle membrane protein VAT-1 homolog yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.22 4.24 2 2 5 2 2 1 2 1 1 67.35 66.938 3 1.0108E-59 92177 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 138.46 134.35 141680000 66072000 37205000 0 6804900 10503000 0 10519000 10576000 0 0 0 0 0 0 0 45564 4019 40849 382297;382298;382299;382300;382301;382302;382303;382304;382305 301581;301582;301583;301584;301585;301586;301587;301588 301583 8 SDERQGVCIGLSEIMK Unmodified 1820.8761 0.8760684 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 1 By MS/MS 2 0 1 1 83.761 75.631 3 0.027524 98918 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 23.1 14.303 7279200 7279200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45565 3641 40850 382306 301589 301589 1 SDESDQQESLHK Unmodified 1401.6008 0.60081606 1598 P49770 EIF2B2 Translation initiation factor eIF-2B subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 1 2 2 2 2 8.0674 8.1863 2;3 9.3088E-05 5663 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.496 78.542 127890000 0 0 0 9038400 3753300 5841100 7683500 5722200 6528900 11050000 15005000 22745000 10955000 10072000 19496000 45566 1598 40851 382307;382308;382309;382310;382311;382312;382313;382314;382315;382316;382317;382318;382319;382320;382321;382322;382323;382324;382325;382326;382327;382328;382329 301590;301591;301592;301593;301594;301595;301596;301597;301598 301594 4 SDESIKEEDK Unmodified 1178.5303 0.53027687 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 6 2 2 4 2 7.7155 4.6295 2;3 2.5946E-47 6565 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 230.06 155.69 164910000 9044700 145110000 10752000 0 0 0 0 0 0 0 0 0 0 0 0 45567 1201 40852 382330;382331;382332;382333;382334;382335;382336;382337 301599;301600;301601;301602 301599 2 SDESIKEEDKDQDEK Unmodified 1793.7803 0.78029656 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.12 2.45 2 1 23 1 2 2 2 2 2 2 2 2 1 2 2 2 2 7.5344 7.3593 3;4 0 5821 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 225.67 197.03 300330000 30429000 5099900 0 18674000 18106000 7933200 22133000 16231000 14715000 24693000 16177000 39428000 24686000 23732000 38296000 45568 1201 40853 382338;382339;382340;382341;382342;382343;382344;382345;382346;382347;382348;382349;382350;382351;382352;382353;382354;382355;382356;382357;382358;382359;382360;382361;382362;382363 301603;301604;301605;301606;301607;301608;301609;301610;301611;301612;301613;301614;301615;301616 301614 13 SDFDEFER Acetyl (Protein N-term) 1085.4302 0.4301689 1202 P26368 U2AF2 Splicing factor U2AF 65 kDa subunit yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 67.581 67.654 2 0.0021987 77622 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 95.909 84.398 373760000 0 0 0 35289000 29936000 31558000 30727000 0 22001000 37634000 42844000 39472000 33935000 33068000 37295000 45569 1202 40854 382364;382365;382366;382367;382368;382369;382370;382371;382372;382373;382374 301617;301618;301619;301620;301621;301622;301623;301624 301617 8 SDFDEFERQLNENK Acetyl (Protein N-term) 1811.7962 0.7962214 1202 P26368 U2AF2 Splicing factor U2AF 65 kDa subunit yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 80.21 79.088 2 2.662E-117 91521 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 208.95 160.67 1206400000 26238000 948090000 8369200 9234300 12595000 16370000 15288000 15447000 22040000 24989000 19682000 26001000 15799000 16403000 29805000 45570 1202 40855 382375;382376;382377;382378;382379;382380;382381;382382;382383;382384;382385;382386;382387;382388;382389;382390 301625;301626;301627;301628;301629;301630;301631;301632;301633;301634;301635;301636;301637;301638;301639;301640 301630 16 SDFEVFDALK Unmodified 1169.5605 0.56045479 361 O43741 PRKAB2 5'-AMP-activated protein kinase subunit beta-2 yes yes 0 0 0 By MS/MS 2 0 1 1 88.146 83.304 2 0.038267 103537 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.846 50.064 15653000 0 15653000 0 0 0 0 0 0 0 0 0 0 0 0 0 45571 361 40856 382391 301641 301641 1 SDFFINK Unmodified 869.42832 0.42831841 2725 Q5GLZ8 HERC4 Probable E3 ubiquitin-protein ligase HERC4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 57.597 51.619 2 0.030658 67025 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.319 55.291 132260000 8868300 115420000 7968900 0 0 0 0 0 0 0 0 0 0 0 0 45572 2725 40857 382392;382393;382394 301642;301643 301643 2 SDFFLEGPFMPPR Oxidation (M) 1554.7177 0.71770049 1974 P78344 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 88.937 88.991 2 6.7851E-09 103311 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.53 99.369 301050000 0 0 0 8061000 16776000 31063000 17835000 35650000 0 0 32970000 44485000 21935000 27111000 65165000 45573 1974 40858 382395;382396;382397;382398;382399;382400;382401;382402;382403;382404 301644;301645;301646;301647;301648;301649;301650;301651;301652;301653;301654;301655;301656;301657;301658;301659;301660;301661 301649 3175 18 SDFFLEGPFMPPR Unmodified 1538.7228 0.72278587 1974 P78344 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 92.669 92.811 2 0.0074785 107651 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 45.598 28.367 24940000 0 0 0 0 0 2214800 0 2871800 1803400 0 3393100 0 1427900 0 13229000 45574 1974 40858 382405;382406;382407;382408;382409;382410 301662;301663;301664;301665;301666;301667;301668;301669;301670 301662 9 SDFGSCPPEEQPR Unmodified 1504.6253 0.62525667 3604 Q8WZ82 OVCA2 Ovarian cancer-associated gene 2 protein yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 34.119 34.45 2 3.6095E-08 36920 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 105.86 94.712 18340000 0 0 0 0 0 2089800 0 0 0 2024400 2663700 0 0 1665700 9896200 45575 3604 40859 382411;382412;382413;382414;382415 301671;301672 301672 2 SDFPPTPVAEVAPK Unmodified 1453.7453 0.74529545 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 78.034 73.259 2 0.026483 90876 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 44.207 32.252 31375000 0 31375000 0 0 0 0 0 0 0 0 0 0 0 0 0 45576 645 40860 382416 301673 301673 1 SDFQVNLNNASR Unmodified 1363.648 0.64804102 426 O60716 CTNND1 Catenin delta-1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 53.19 53.216 2 4.3413E-09 59150 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 124.67 104.68 162610000 0 0 0 12493000 16027000 0 26935000 14588000 0 0 51795000 40773000 0 0 0 45577 426 40861 382417;382418;382419;382420;382421;382422;382423;382424;382425;382426;382427;382428 301674;301675;301676;301677;301678;301679;301680;301681;301682;301683;301684 301681 11 SDGAEGQGQGQLLIK Unmodified 1499.758 0.7579854 2756 Q5SRE5 NUP188 Nucleoporin NUP188 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 46.65 46.958 2 0.0013665 51685 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.028 44.745 40442000 0 0 0 0 0 3613700 2841700 3783500 2693500 4916000 4672100 6614400 0 5229300 6077400 45578 2756 40862 382429;382430;382431;382432;382433;382434;382435;382436;382437 301685;301686;301687 301686 3 SDGALLLGASSLSGR Unmodified 1402.7416 0.74160705 4092 Q9BQA1 WDR77 Methylosome protein 50 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 75.909 75.978 2 3.8289E-05 87088 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.745 75.874 122880000 0 0 0 4687800 4947100 0 7076500 8507800 4500600 12994000 18574000 14917000 12693000 11431000 22553000 45579 4092 40863 382438;382439;382440;382441;382442;382443;382444;382445;382446;382447;382448 301688;301689;301690;301691;301692;301693;301694;301695;301696;301697;301698;301699;301700 301692 13 SDGAPASDSK Unmodified 933.40395 0.40395415 1993 P80723 BASP1 Brain acid soluble protein 1 yes yes 0 0 0 By MS/MS By MS/MS 1 0 2 1 1 106.71 109.78 2 1.1204E-05 99791 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 135.63 100.7 111740000 32350000 79390000 0 0 0 0 0 0 0 0 0 0 0 0 0 45580 1993 40864 382449;382450 301701;301702 301702 1 SDGAPASDSKPGSSEAAPSSK Unmodified 1931.8708 0.87084291 1993 P80723 BASP1 Brain acid soluble protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.87 3.54 4 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 13.579 12.839 3 5.15E-14 12305 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 79.143 77.524 1872500000 88461000 351110000 5236100 82562000 97559000 0 95224000 94041000 43413000 119390000 2080800 271170000 141660000 140340000 340270000 45581 1993 40865 382451;382452;382453;382454;382455;382456;382457;382458;382459;382460;382461;382462;382463;382464;382465 301703;301704;301705;301706;301707;301708;301709;301710;301711;301712 301708 6 SDGDPIVDPEK Unmodified 1170.5404 0.54044763 3475 Q8TAQ2 SMARCC2 SWI/SNF complex subunit SMARCC2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36.219 35.548 2 6.5098E-05 38417 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 135.43 123.22 388170000 15020000 29439000 0 25476000 22389000 27548000 24541000 18553000 19772000 30456000 30183000 36632000 33692000 27808000 46663000 45582 3475 40866 382466;382467;382468;382469;382470;382471;382472;382473;382474;382475;382476;382477;382478;382479 301713;301714;301715;301716;301717;301718;301719;301720;301721;301722;301723;301724;301725;301726;301727 301719 14 SDGEAKPEPSPSPR Unmodified 1452.6845 0.68448611 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.598 12.752 3 0.0034393 11519 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.316 40.093 191540000 0 0 0 14878000 15524000 13528000 17520000 12508000 11825000 19227000 15517000 20546000 16650000 11425000 22389000 45583 1201 40867 382480;382481;382482;382483;382484;382485;382486;382487;382488;382489;382490;382491 301728;301729;301730 301729 1 SDGEMVLPGFPDADSFVK Oxidation (M) 1925.8717 0.87169453 2062 Q01780 EXOSC10 Exosome component 10 yes yes 0 1 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 86.984 87.136 2 0.00070033 100810 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.423 36.443 7655100 0 0 0 0 0 0 0 0 1548700 2863500 0 0 0 0 3242900 45584 2062 40868 382492;382493;382494 301731;301732 301732 3348 2 SDGEMVLPGFPDADSFVK Unmodified 1909.8768 0.87677991 2062 Q01780 EXOSC10 Exosome component 10 yes yes 0 0 0 By MS/MS 2 0 1 1 95.391 90.527 2 0.0034228 112152 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.22 63.817 42197000 0 42197000 0 0 0 0 0 0 0 0 0 0 0 0 0 45585 2062 40868 382495 301733 301733 1 SDGFSIETCK Unmodified 1142.4914 0.49138895 1057 P17655 CAPN2 Calpain-2 catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 43.891 43.171 2 0.0049526 47925 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 70.908 65.249 589010000 0 420860000 0 10503000 6785800 13116000 8153400 0 0 15871000 21792000 21629000 22528000 17089000 30686000 45586 1057 40869 382496;382497;382498;382499;382500;382501;382502;382503;382504;382505;382506;382507;382508;382509 301734;301735;301736;301737;301738;301739;301740;301741;301742;301743;301744;301745;301746;301747 301745 11 SDGGYTYDTSDLAAIK Unmodified 1675.7577 0.75771063 1733 P54136 RARS Arginine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.65 3.66 1 3 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 71.976 71.061 2 2.6263E-23 78498 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 118.87 107 835480000 48705000 445360000 2530200 12809000 15390000 29172000 20879000 16581000 17294000 29106000 41375000 35947000 28196000 27420000 64723000 45587 1733 40870 382510;382511;382512;382513;382514;382515;382516;382517;382518;382519;382520;382521;382522;382523;382524;382525;382526 301748;301749;301750;301751;301752;301753;301754;301755;301756;301757;301758;301759;301760;301761;301762;301763;301764;301765 301753 17 SDGHPETPK Unmodified 966.44067 0.44067401 2891 Q6KC79 NIPBL Nipped-B-like protein yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 6.3226 3.0218 2 0.0089039 5034 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.819 71.526 34538000 0 34538000 0 0 0 0 0 0 0 0 0 0 0 0 0 45588 2891 40871 382527;382528 301766 301766 1 SDGIPMYK Unmodified 909.4266 0.42660385 4880 Q9UGI8 TES Testin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 42.722 43.13 2 0.020609 47140 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.659 34.236 40850000 0 0 0 0 0 0 0 3863400 0 0 10229000 0 0 8325500 18432000 45589 4880 40872 382529;382530;382531;382532 301767 301767 1 SDGIYIINLK Unmodified 1134.6285 0.62847478 875 P08865 RPSA 40S ribosomal protein SA yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 80.601 79.479 2 0.0023495 92367 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 84.498 56.28 578020000 51193000 191550000 54481000 16255000 7063000 8876400 7487400 10509000 6240200 12648000 34966000 39454000 14599000 31694000 91015000 45590 875 40873 382533;382534;382535;382536;382537;382538;382539;382540;382541;382542;382543;382544;382545;382546;382547;382548 301768;301769;301770;301771;301772;301773;301774;301775;301776;301777;301778;301779;301780;301781 301778 14 SDGSFIGYK Unmodified 972.45526 0.45526144 1305 P31751 AKT2 RAC-beta serine/threonine-protein kinase yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 46.448 41.759 2 0.0067071 54805 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.74 73.127 76421000 0 74894000 1526400 0 0 0 0 0 0 0 0 0 0 0 0 45591 1305 40874 382549;382550 301782 301782 1 SDGSGESAQPPEDSSPPASSESSSTR Unmodified 2535.0481 0.048091582 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 2 1 1 1 1 1 1 1 27.085 27.31 3 3.4567E-06 29014 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 33.548 24.616 89575000 0 0 0 5560000 0 10285000 12196000 0 6481100 10947000 12869000 9347500 0 9306100 12583000 45592 3119 40875 382551;382552;382553;382554;382555;382556;382557;382558;382559;382560;382561 301783;301784;301785;301786;301787;301788;301789;301790;301791;301792 301789 10 SDGTETSTNLHQK Unmodified 1416.6481 0.6481006 1533 P48147 PREP Prolyl endopeptidase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS 6.88 3.74 4 3 10 1 5 1 1 1 1 2 1 2 2 8.7721 7.5518 2;3 5.8476E-21 11233 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 134.84 90.14 456440000 9279600 386670000 1042700 3549100 0 1058000 0 1390500 0 0 19556000 7968300 0 5106200 20815000 45593 1533 40876 382562;382563;382564;382565;382566;382567;382568;382569;382570;382571;382572;382573;382574;382575;382576;382577;382578 301793;301794;301795;301796;301797;301798;301799;301800 301798 8 SDGTLINQVEVGEDGEDLLVK Unmodified 2229.1012 0.10123677 4407 Q9H582 ZNF644 Zinc finger protein 644 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 88.015 83.987 2 1.3959E-09 104307 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.233 71.689 25657000 0 25657000 0 0 0 0 0 0 0 0 0 0 0 0 0 45594 4407 40877 382579;382580 301801;301802 301801 2 SDHGAYSQSPAIK Unmodified 1359.6419 0.64189301 5192 Q9Y4B6 VPRBP Protein VPRBP yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 24.973 20.885 3 0.025711 27402 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 34.05 28.951 56074000 0 56074000 0 0 0 0 0 0 0 0 0 0 0 0 0 45595 5192 40878 382581;382582 301803 301803 1 SDHGAYSQSPAIKK Unmodified 1487.7369 0.73685603 5192 Q9Y4B6 VPRBP Protein VPRBP yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 18.815 15.21 3 0.0012718 22267 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 59.796 52.757 16514000 13111000 0 3403600 0 0 0 0 0 0 0 0 0 0 0 0 45596 5192 40879 382583;382584 301804 301804 0 SDHLIQTDTVNLHR Unmodified 1647.8329 0.83288168 1648 P51151 RAB9A Ras-related protein Rab-9A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 45.076 45.356 3 0.00026965 50944 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 70.889 57.47 56271000 0 0 0 0 0 13535000 0 0 13744000 12116000 0 16875000 0 0 0 45597 1648 40880 382585;382586;382587;382588;382589 301805;301806;301807;301808 301805 4 SDHPGISITDLSK Unmodified 1368.6885 0.68850885 2163 Q08945 SSRP1 FACT complex subunit SSRP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 7.24 3.75 5 1 11 2 2 2 1 1 1 1 1 1 1 1 1 1 1 60.006 58.011 2;3 3.4357E-13 72661 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 145.91 121.88 1498500000 58719000 588950000 193120000 25233000 37517000 79080000 40058000 32101000 45336000 66404000 85963000 0 69819000 75910000 100320000 45598 2163 40881 382590;382591;382592;382593;382594;382595;382596;382597;382598;382599;382600;382601;382602;382603;382604;382605;382606 301809;301810;301811;301812;301813;301814;301815;301816;301817;301818;301819 301816 9 SDHYTIQR Unmodified 1018.4832 0.48320752 3581 Q8WX93 PALLD Palladin yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 15.207 15.316 2 6.0523E-08 14430 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 163.67 122.44 76574000 0 0 0 5581300 4085700 5065500 10232000 6209400 0 0 20147000 0 0 0 25253000 45599 3581 40882 382607;382608;382609;382610;382611;382612;382613 301820;301821;301822 301821 3 SDIASHFSNK Unmodified 1104.52 0.51998696 4371 Q9H2P0 ADNP Activity-dependent neuroprotector homeobox protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 29.179 24.788 2 1.4744E-49 34750 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 219.8 150.6 86497000 56527000 16363000 13607000 0 0 0 0 0 0 0 0 0 0 0 0 45600 4371 40883 382614;382615;382616 301823;301824;301825 301824 3 SDIATLLK Unmodified 859.50148 0.50148335 5198 Q9Y4E8 USP15 Ubiquitin carboxyl-terminal hydrolase 15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 63.726 63.833 2 0.048796 72037 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.349 18.2 31271000 0 0 0 2785900 0 2851400 1988900 1707900 2074500 3781600 3733500 0 5024100 0 7323700 45601 5198 40884 382617;382618;382619;382620;382621;382622;382623;382624;382625 301826 301826 1 SDIDEIVLVGGSTR Unmodified 1459.7518 0.75183739 932 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 25 2 2 2 2 3 2 2 2 2 2 2 2 77.879 77.937 2;3 1.9668E-32 90124 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 160.67 119.95 870390000 0 0 0 39438000 42164000 73780000 46997000 48333000 61226000 88908000 98693000 99994000 54940000 59481000 156440000 45602 932 40885 382626;382627;382628;382629;382630;382631;382632;382633;382634;382635;382636;382637;382638;382639;382640;382641;382642;382643;382644;382645;382646;382647;382648;382649;382650 301827;301828;301829;301830;301831;301832;301833;301834;301835;301836;301837;301838;301839;301840;301841;301842;301843;301844;301845;301846 301828 20 SDIDEIVLVGGSTRIPK Unmodified 1797.9836 0.98362824 932 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0.535 1 5 1 3 2 2 87.937 84.516 2;3 3.7115E-34 101400 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 150.21 125.92 837920000 567870000 131570000 138480000 0 0 0 0 0 0 0 0 0 0 0 0 45603 932 40886 382651;382652;382653;382654;382655;382656;382657 301847;301848;301849;301850;301851;301852;301853;301854;301855 301851 9 SDIGEVILVGGMTR Oxidation (M) 1461.7497 0.7497289 1399 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 76.858 76.848 2 0.0022035 88208 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 48.44 32.107 42669000 0 0 0 3693100 3896100 6951300 6747800 5431100 5687300 0 0 0 4520400 5741500 0 45604 1399 40887 382658;382659;382660;382661;382662;382663;382664;382665;382666 301856;301857;301858;301859;301860;301861;301862;301863;301864 301858 2174 2 SDIGEVILVGGMTR Unmodified 1445.7548 0.75481428 1399 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 83.607 83.703 2 0.0017875 96975 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 69.03 50.25 35905000 0 0 0 0 1055100 0 0 4440100 0 4378300 7378900 5475000 0 0 13177000 45605 1399 40887 382667;382668;382669;382670;382671;382672 301865;301866;301867;301868;301869 301867 5 SDIGEVILVGGMTRMPK Unmodified 1801.943 0.94302575 1399 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 0 1 By MS/MS 2 0 1 1 91.477 83.347 3 0.0089185 108147 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.249 34.873 16206000 16206000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45606 1399 40888 382673 301870 301870 1 SDIGPARDANDPVDDR Unmodified 1711.7762 0.77615466 601 O94906 PRPF6 Pre-mRNA-processing factor 6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 32.929 33.377 3 0.020094 36122 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 30.107 11.695 37364000 0 0 0 0 0 0 0 0 4847400 0 7332900 6171200 5539200 6111700 7361100 45607 601 40889 382674;382675;382676;382677;382678;382679 301871 301871 1 SDIGPARDANDPVDDRHAPPGK Unmodified 2299.0941 0.094134755 601 O94906 PRPF6 Pre-mRNA-processing factor 6 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 30.885 31.128 4 0.034505 33811 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 22.118 14.496 49619000 0 0 0 0 0 0 5898800 6006400 10072000 0 8988600 0 8038000 10615000 0 45608 601 40890 382680;382681;382682;382683;382684;382685 301872 301872 1 SDIIFFQR Unmodified 1024.5342 0.53418046 2367 Q14116 IL18 Interleukin-18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 76.998 76.827 2 0.0093239 93407 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 132.29 104.76 151320000 97743 0 41927000 4522200 1834700 0 3771800 3824800 2053600 4860200 17716000 0 4550000 12533000 53632000 45609 2367 40891 382686;382687;382688;382689;382690;382691;382692;382693;382694;382695;382696;382697 301873;301874;301875;301876;301877;301878 301876 6 SDIPEPEREQK Unmodified 1326.6416 0.64155866 3465 Q8NI27 THOC2 THO complex subunit 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.564 21.772 3 0.0050794 22714 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 50.95 42.061 276740000 0 0 0 14789000 12388000 22168000 20524000 0 22091000 20416000 34347000 39746000 30306000 31811000 28153000 45610 3465 40892 382698;382699;382700;382701;382702;382703;382704;382705;382706;382707;382708;382709 301879;301880;301881;301882;301883;301884;301885 301879 5 SDISSSSQGVIEK Unmodified 1335.6518 0.65178899 2578 Q15788 NCOA1 Nuclear receptor coactivator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 31.562 31.566 2 0.0052313 34444 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 59.542 43.88 16352000 0 0 0 1563000 1617000 0 2247000 2760700 2381900 3084800 0 0 2697600 0 0 45611 2578 40893 382710;382711;382712;382713;382714;382715;382716 301886;301887;301888;301889 301888 4 SDITEGVDIPK Unmodified 1172.5925 0.5924832 3775 Q96CB8 INTS12 Integrator complex subunit 12 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 56.886 57.102 2 0.0044032 65135 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 61.56 30.873 79187000 0 0 0 0 9789700 0 7747200 0 0 8584900 8488500 16247000 9236500 8097600 10995000 45612 3775 40894 382717;382718;382719;382720;382721;382722;382723;382724 301890;301891 301891 2 SDIVQLRGPK Unmodified 1111.635 0.63495714 2033 Q00341 HDLBP Vigilin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 39.909 39.073 2 1.9942E-10 54070 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 161.79 129.16 201310000 98741000 0 13694000 6048500 0 6023000 7220200 6304200 5338300 11073000 12271000 11959000 0 0 22637000 45613 2033 40895 382725;382726;382727;382728;382729;382730;382731;382732;382733;382734;382735 301892;301893;301894;301895;301896;301897 301895 4 SDKPDMAEIEK Oxidation (M) 1277.5809 0.58093224 1896 P62328 TMSB4X Thymosin beta-4;Hematopoietic system regulatory peptide yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2 0 5 2 2 1 16.929 13.359 2;3 0.0037192 19784 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.515 55.899 + 217230000 26311000 187810000 3105500 0 0 0 0 0 0 0 0 0 0 0 0 45614 1896 40896 382736;382737;382738;382739;382740 301898;301899;301900;301901;301902 301901 3069 4 SDKPDMAEIEK Acetyl (Protein N-term);Oxidation (M) 1319.5915 0.59149692 1896 P62328 TMSB4X Thymosin beta-4;Hematopoietic system regulatory peptide yes yes 1 1 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS 5.67 4.35 2 1 3 1 2 1 1 1 41.437 41.064 2 6.2767E-24 101993 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 191.33 134.9 + 1596700000 0 1494700000 0 0 0 0 0 0 0 0 30236000 0 3323000 0 68419000 45615 1896 40896 382741;382742;382743;382744;382745;382746 301903;301904;301905;301906;301907;301908;301909 301909 3069 7 SDKPDMAEIEK Unmodified 1261.586 0.58601761 1896 P62328 TMSB4X Thymosin beta-4;Hematopoietic system regulatory peptide yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 5 2 2 1 35.605 30.433 2;3 5.2395E-08 40302 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 143.24 80.022 + 613550000 80927000 528850000 3770000 0 0 0 0 0 0 0 0 0 0 0 0 45616 1896 40896 382747;382748;382749;382750;382751 301910;301911;301912;301913;301914 301911 3 SDKPDMAEIEK Acetyl (Protein N-term) 1303.5966 0.5965823 1896 P62328 TMSB4X Thymosin beta-4;Hematopoietic system regulatory peptide yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.27 3.54 1 5 2 3 4 4 1 1 1 49.069 46.078 2;3 2.6414E-56 93302 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 218.15 157.47 + 4752200000 2113900000 2073000000 0 0 0 0 0 0 0 0 138010000 86873000 0 0 340440000 45617 1896 40896 382752;382753;382754;382755;382756;382757;382758;382759;382760;382761;382762 301915;301916;301917;301918;301919;301920;301921;301922;301923;301924;301925;301926;301927;301928;301929;301930 301924 15 SDKTEEIAEEEETVFPK Unmodified 1979.9211 0.92114714 4588 Q9NR30 DDX21 Nucleolar RNA helicase 2 yes yes 0 0 1 By MS/MS 2 0 1 1 75.248 67.117 3 0.027111 88491 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 31.297 19.379 10621000 10621000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45618 4588 40897 382763 301931 301931 1 SDLAVPSELALLK Unmodified 1354.7708 0.77078192 2157 Q08380 LGALS3BP Galectin-3-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 87.086 87.155 2 0.03793 100897 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 32.606 19.253 103000000 0 0 0 2738300 6324400 6709800 5412000 7647500 5070200 12288000 12040000 10161000 9786500 9231000 15589000 45619 2157 40898 382764;382765;382766;382767;382768;382769;382770;382771;382772;382773;382774;382775 301932;301933;301934 301934 3 SDLDTLLSMEMK 2 Oxidation (M) 1413.6367 0.63673256 3895 Q96JJ3 ELMO2 Engulfment and cell motility protein 2 yes yes 0 2 0 By MS/MS 2 0 1 1 77.164 72.327 2 0.043988 90403 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 49.489 37.253 23277000 0 23277000 0 0 0 0 0 0 0 0 0 0 0 0 0 45620 3895 40899 382776 301935 301935 1 SDLDTLLSMEMK Oxidation (M) 1397.6418 0.64181793 3895 Q96JJ3 ELMO2 Engulfment and cell motility protein 2 yes yes 0 1 0 By MS/MS 2 0 2 2 83.963 81.573 2 0.03126 101759 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 48.028 31.002 37055000 0 37055000 0 0 0 0 0 0 0 0 0 0 0 0 0 45621 3895 40899 382777;382778 301936 301936 1 SDLDTLLSMEMK Unmodified 1381.6469 0.64690331 3895 Q96JJ3 ELMO2 Engulfment and cell motility protein 2 yes yes 0 0 0 By matching By MS/MS By MS/MS 2 0 3 1 1 1 90.209 87.752 2 0.0014767 108770 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.066 68.527 63666000 219920 62833000 613170 0 0 0 0 0 0 0 0 0 0 0 0 45622 3895 40899 382779;382780;382781 301937 301937 1 SDLEAQVESLK Unmodified 1217.6139 0.61394692 87 CON__Q15323;CON__Q9UE12;Q15323 KRT31 Keratin, type I cuticular Ha1 no no 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 62.613 62.567 2 0.0096699 70663 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.297 29.558 + 27781000 0 0 0 2587500 0 2993800 0 0 0 0 0 0 0 0 22200000 45623 87 40900 382782;382783;382784 301938 301938 1 SDLEIELLK Unmodified 1058.5859 0.58594126 4318 Q9H098 FAM107B Protein FAM107B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0.632 1 3 1 2 2 1 80.689 78.063 2 0.0066693 98247 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.87 65.066 122750000 19604000 98627000 4518100 0 0 0 0 0 0 0 0 0 0 0 0 45624 4318 40901 382785;382786;382787;382788;382789 301939;301940;301941 301939 3 SDLEMQYETLQEELMALK 2 Oxidation (M) 2202.0072 0.0072017319 1354 P35527;CON__P35527 KRT9 Keratin, type I cytoskeletal 9 yes no 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 95.024 95.077 2 1.6541E-08 110383 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 83.617 71.057 + 23841000 0 0 0 9820500 0 0 0 1917900 0 10236000 0 0 0 0 1866400 45625 1354 40902 382790;382791;382792;382793 301942;301943;301944 301942 2061;2062 3 SDLEMQYETLQEELMALK Oxidation (M) 2186.0123 0.01228711 1354 P35527;CON__P35527 KRT9 Keratin, type I cytoskeletal 9 yes no 0 1 0 By MS/MS By MS/MS By matching 2 0 4 1 2 1 98.175 94.193 2 9.0576E-71 116800 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 169.62 139.41 + 85583000 0 83964000 1619400 0 0 0 0 0 0 0 0 0 0 0 0 45626 1354 40902 382794;382795;382796;382797 301945;301946;301947 301946 2061;2062 3 SDLEMQYETLQEELMALK Unmodified 2170.0174 0.017372488 1354 P35527;CON__P35527 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 0 By MS/MS By MS/MS By MS/MS 2.12 0.331 7 1 3 4 1 99.212 93.668 2;3 6.3964E-71 116993 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 210.41 186.13 + 287620000 61814000 223700000 2105900 0 0 0 0 0 0 0 0 0 0 0 0 45627 1354 40902 382798;382799;382800;382801;382802;382803;382804;382805 301948;301949;301950;301951;301952;301953;301954;301955 301951 7 SDLETQISSLNEK Unmodified 1462.7151 0.71511753 4264 Q9BZF9 UACA Uveal autoantigen with coiled-coil domains and ankyrin repeats yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 64.839 61.533 2 1.8088E-08 71419 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 107.06 78.098 55492000 0 50971000 0 4521200 0 0 0 0 0 0 0 0 0 0 0 45628 4264 40903 382806;382807;382808 301956;301957;301958 301957 3 SDLETSEPK Unmodified 1004.4662 0.46622005 1096 P19838 NFKB1 Nuclear factor NF-kappa-B p105 subunit;Nuclear factor NF-kappa-B p50 subunit yes yes 0 0 0 By MS/MS 10 0 1 1 15.388 15.861 2 0.045968 14818 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.083 10.728 11135000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11135000 45629 1096 40904 382809 301959 301959 1 SDLFQDDLYPDTAGPEAALEAEEWFEGK Unmodified 3142.3931 0.39312128 5008 Q9ULV4 CORO1C Coronin-1C yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 99.568 94.112 3 2.3996E-78 118069 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 130.43 127.53 130710000 102950000 27758000 0 0 0 0 0 0 0 0 0 0 0 0 0 45630 5008 40905 382810;382811;382812 301960;301961;301962;301963 301962 4 SDLGNLLK Unmodified 858.48108 0.48108226 271 O15294 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 60.264 60.447 2 0.043235 68874 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 49.325 27.644 115130000 0 0 0 0 10169000 0 0 0 0 16894000 0 21728000 19214000 16954000 30174000 45631 271 40906 382813;382814;382815;382816;382817;382818 301964;301965 301964 2 SDLGPSYGGWQVLDATPQER Unmodified 2175.0233 0.023261223 2150 Q08188 TGM3 Protein-glutamine gamma-glutamyltransferase E;Protein-glutamine gamma-glutamyltransferase E 50 kDa catalytic chain;Protein-glutamine gamma-glutamyltransferase E 27 kDa non-catalytic chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 2 2 2 2 2 2 2 1 1 1 82.83 82.884 2;3 1.1317E-11 96129 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 94.728 90.013 157580000 0 0 0 11337000 7192800 9642300 4786300 33805000 5617900 17677000 12289000 25640000 7790500 7554400 14249000 45632 2150 40907 382819;382820;382821;382822;382823;382824;382825;382826;382827;382828;382829;382830;382831;382832;382833;382834;382835;382836;382837;382838;382839 301966;301967;301968;301969;301970;301971;301972;301973;301974;301975;301976;301977 301975 10 SDLHSVLAQK Unmodified 1096.5877 0.58767259 2849 Q676U5 ATG16L1 Autophagy-related protein 16-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 37.325 36.17 2 1.0494E-10 45966 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 167.23 106.26 99924000 38284000 17041000 17783000 0 0 2387400 0 2058800 2229700 2762800 4796300 3746200 2028600 0 6805100 45633 2849 40908 382840;382841;382842;382843;382844;382845;382846;382847;382848;382849;382850 301978;301979;301980;301981;301982 301982 5 SDLIQDEALR Unmodified 1158.5881 0.58806652 3924 Q96MF7 NSMCE2 E3 SUMO-protein ligase NSE2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 54.22 54.357 2 0.028465 62484 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 43.651 10.388 130570000 0 0 0 6555900 9239000 7492900 8202300 6459200 6861500 10895000 12669000 17243000 14113000 12928000 17913000 45634 3924 40909 382851;382852;382853;382854;382855;382856;382857;382858;382859;382860;382861;382862 301983;301984;301985 301985 3 SDLIQDEALRR Unmodified 1314.6892 0.68917755 3924 Q96MF7 NSMCE2 E3 SUMO-protein ligase NSE2 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 46.77 47.121 3 0.00092376 52943 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 65.695 56.183 259570000 0 0 0 0 0 32829000 0 26935000 19588000 26143000 32701000 36157000 39224000 0 45997000 45635 3924 40910 382863;382864;382865;382866;382867;382868;382869;382870 301986;301987;301988;301989;301990;301991;301992 301988 4 SDLLELDCQLTR Unmodified 1461.7133 0.71334339 3052 Q7L5L3 GDPD3 Glycerophosphodiester phosphodiesterase domain-containing protein 3 yes yes 0 0 0 By MS/MS 10 0 1 1 80.013 79.579 2 0.00094924 92353 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 72.2 65.597 6082900 0 0 0 6082900 0 0 0 0 0 0 0 0 0 0 0 45636 3052 40911 382871 301993 301993 1 SDLVLLYELK Unmodified 1191.6751 0.67509062 4550 Q9NPF5 DMAP1 DNA methyltransferase 1-associated protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 87.392 87.462 2 0.020328 101565 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 56.258 37.482 39519000 0 0 0 1521700 1800400 3899800 2784600 2944000 2861700 4681900 4050100 3680100 1893300 3224100 6177100 45637 4550 40912 382872;382873;382874;382875;382876;382877;382878;382879;382880;382881;382882;382883 301994;301995;301996 301996 3 SDLVNWFK Unmodified 1007.5076 0.50763136 375 O43847 NRD1 Nardilysin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81.448 80.472 2 0.0031941 100858 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.57 98.266 209280000 19343000 107010000 12507000 2048900 1550100 3420800 1760100 4233100 2815500 5029300 7232200 6996600 5851500 5761900 23726000 45638 375 40913 382884;382885;382886;382887;382888;382889;382890;382891;382892;382893;382894;382895;382896;382897;382898 301997;301998;301999;302000;302001;302002;302003;302004;302005;302006;302007;302008;302009 302000 13 SDLYFVPLEGSK Unmodified 1353.6816 0.68163256 1736 P54259 ATN1 Atrophin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.407 81.468 2 0.014663 93801 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.419 31.928 145030000 0 0 0 4718300 6875500 6925900 7841900 7406700 9848400 13452000 17622000 14578000 8029700 12454000 35274000 45639 1736 40914 382899;382900;382901;382902;382903;382904;382905;382906;382907;382908;382909;382910 302010;302011;302012;302013;302014;302015;302016 302010 7 SDLYSSGRDR Unmodified 1154.5316 0.53161428 1395 P38159 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 12.821 13.013 3 0.025459 11840 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 33.057 22.686 76010000 0 0 0 12190000 10705000 0 0 0 0 13250000 8318400 16100000 0 0 15447000 45640 1395 40915 382911;382912;382913;382914;382915;382916 302017;302018 302018 1 SDMEWTSSSK Oxidation (M) 1172.4656 0.46556813 2411 Q14527 HLTF Helicase-like transcription factor yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 16.657 16.749 2 0.0077159 16961 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 53.756 49.022 14956000 0 0 0 0 1391400 2485200 1549500 1249900 1735800 2369600 0 0 2667000 1507500 0 45641 2411 40916 382917;382918;382919;382920;382921;382922;382923;382924 302019;302020;302021;302022 302019 3962 4 SDMEWTSSSK Unmodified 1156.4707 0.47065351 2411 Q14527 HLTF Helicase-like transcription factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.247 30.439 2 0.0058199 32798 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 67.414 62.679 122510000 0 0 0 7303200 4759900 16785000 4380800 6430900 8932700 8165200 12965000 16485000 9494000 9120700 17686000 45642 2411 40916 382925;382926;382927;382928;382929;382930;382931;382932;382933;382934;382935;382936 302023;302024;302025;302026;302027;302028;302029;302030;302031;302032;302033 302030 9 SDMMEENIDTSAQAVAETK Unmodified 2068.8929 0.89290026 2003 P82970 HMGN5 High mobility group nucleosome-binding domain-containing protein 5 yes yes 0 0 0 By MS/MS 2 0 2 2 72.47 66.743 2;3 0.00020799 84787 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.529 81.695 30336000 0 30336000 0 0 0 0 0 0 0 0 0 0 0 0 0 45643 2003 40917 382937;382938 302034;302035 302035 1 SDMMEENIDTSAQAVAETK 2 Oxidation (M) 2100.8827 0.8827295 2003 P82970 HMGN5 High mobility group nucleosome-binding domain-containing protein 5 yes yes 0 2 0 By MS/MS 1 0 1 1 106.19 111.46 3 6.9471E-05 92130 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 60.561 56.459 13177000 13177000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45644 2003 40917 382939 302036 302036 3251;3252 1 SDMMEENIDTSAQAVAETK Oxidation (M) 2084.8878 0.88781488 2003 P82970 HMGN5 High mobility group nucleosome-binding domain-containing protein 5 yes yes 0 1 0 By MS/MS 1 0 1 1 106.51 111.78 3 4.1827E-22 92482 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 100.97 98.367 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45645 2003 40917 382940 302037 302037 3251;3252 1 SDMMSHLVK Oxidation (M) 1062.4838 0.48380115 1333 P33992 MCM5 DNA replication licensing factor MCM5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 4 1 1 2 23.744 19.997 2 0.00080817 25904 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 143.28 96.29 98862000 36827000 26606000 35429000 0 0 0 0 0 0 0 0 0 0 0 0 45646 1333 40918 382941;382942;382943;382944 302038;302039;302040;302041 302041 2003;2004 4 SDMMSHLVK 2 Oxidation (M) 1078.4787 0.47871577 1333 P33992 MCM5 DNA replication licensing factor MCM5 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS 2 0 4 1 2 1 11.281 8.5156 2 0.00077571 11112 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 123.16 105.17 74235000 0 49223000 25012000 0 0 0 0 0 0 0 0 0 0 0 0 45647 1333 40918 382945;382946;382947;382948 302042;302043;302044 302044 2003;2004 3 SDMMSHLVK Unmodified 1046.4889 0.48888653 1333 P33992 MCM5 DNA replication licensing factor MCM5 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 48.789 42.882 2 0.013725 59379 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.75 60.619 180090000 137860000 0 42233000 0 0 0 0 0 0 0 0 0 0 0 0 45648 1333 40918 382949;382950 302045;302046 302045 2 SDMYILNESLTDPAIVK Oxidation (M) 1923.9499 0.94994485 2062 Q01780 EXOSC10 Exosome component 10 yes yes 0 1 0 By matching By matching By matching By MS/MS By matching 10 0 5 1 1 1 1 1 82.507 82.655 2 2.362E-05 95841 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.655 63.888 15307000 0 0 0 0 0 0 0 1631900 0 3698900 2737900 4135400 0 3103100 0 45649 2062 40919 382951;382952;382953;382954;382955 302047 302047 3349 1 SDNFVICSVTGAGPREER Unmodified 1992.9323 0.93233773 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 65.178 65.338 3 0.0015815 74681 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 29.603 23.592 56542000 0 0 0 7357500 0 0 4542400 5483200 0 6078000 7003100 7918700 5299700 3229900 9629700 45650 3443 40920 382956;382957;382958;382959;382960;382961;382962;382963;382964 302048;302049;302050;302051;302052;302053;302054;302055;302056 302056 7 SDNGELEDKPPAPPVR Acetyl (Protein N-term) 1761.8533 0.85334235 2248 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 53.868 54.005 2 2.1419E-98 61186 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 196.7 182.54 382160000 0 0 0 26290000 18717000 32873000 35292000 15479000 18391000 40554000 38163000 46598000 23367000 33963000 52478000 45651 2248 40921 382965;382966;382967;382968;382969;382970;382971;382972;382973;382974;382975;382976 302057;302058;302059;302060;302061;302062;302063;302064;302065;302066;302067;302068;302069;302070;302071;302072 302066 16 SDNHSPAVVTTTVSSK Unmodified 1628.8006 0.8005785 472 O75179 ANKRD17 Ankyrin repeat domain-containing protein 17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.01 2 2 16 4 1 1 1 1 2 1 1 2 2 2 2 32.035 31.297 2;3 0.00014117 40621 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.558 60.288 324320000 0 92985000 0 15966000 15009000 19301000 17083000 20052000 2368800 23772000 0 37797000 20917000 22510000 36555000 45652 472 40922 382977;382978;382979;382980;382981;382982;382983;382984;382985;382986;382987;382988;382989;382990;382991;382992;382993;382994;382995;382996 302073;302074;302075;302076;302077;302078;302079;302080;302081;302082;302083;302084;302085;302086;302087;302088 302077 15 SDNKDDDIDIDAI Unmodified 1447.6314 0.63144748 1751 P55010 EIF5 Eukaryotic translation initiation factor 5 yes yes 0 0 1 By MS/MS 2 0 1 1 71.971 66.244 2 0.032447 84105 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.261 70.413 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45653 1751 40923 382997 302089 302089 1 SDNLSDSSHSEISSR Unmodified 1619.7023 0.70232101 3520 Q8TEU7 RAPGEF6 Rap guanine nucleotide exchange factor 6 yes yes 0 0 0 By MS/MS 10 0 1 1 20.219 20.838 3 0.032887 20580 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.693 33.491 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45654 3520 40924 382998 302090 302090 1 SDNSFNQELLK Unmodified 1293.6201 0.62009493 3089 Q7Z401 DENND4A C-myc promoter-binding protein yes yes 0 0 0 By MS/MS 2 0 1 1 61.591 55.715 2 0.0051124 71554 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.895 62.336 18409000 0 18409000 0 0 0 0 0 0 0 0 0 0 0 0 0 45655 3089 40925 382999 302091 302091 1 SDNVLLGMEGSVK Unmodified 1347.6704 0.67041595 2248 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.91 3.42 2 1 8 2 1 1 1 1 1 1 1 1 1 73.386 72.316 2 1.6004E-08 90285 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 153.34 114.56 687470000 0 601830000 9109500 5264100 0 13441000 6294300 0 4615100 11629000 0 14488000 0 0 20798000 45656 2248 40926 383000;383001;383002;383003;383004;383005;383006;383007;383008;383009;383010 302092;302093;302094;302095;302096;302097;302098;302099 302095 6 SDNVLLGMEGSVK Oxidation (M) 1363.6653 0.66533057 2248 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.8 3.12 3 1 1 1 2 1 1 55.682 49.989 2 2.6438E-08 64477 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.39 81.4 192420000 6891000 182140000 3388400 0 0 0 0 0 0 0 0 0 0 0 0 45657 2248 40926 383011;383012;383013;383014;383015 302100;302101;302102;302103;302104 302101 3653 5 SDPDHLAELVK Unmodified 1222.6194 0.61936665 5014 Q9UM54 MYO6 Unconventional myosin-VI yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 52.984 53.069 3 0.024974 59934 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 36.954 24.378 87783000 0 0 0 9667700 5734100 12985000 0 6313200 3436600 12010000 9652900 15274000 12710000 0 0 45658 5014 40927 383016;383017;383018;383019;383020;383021;383022;383023;383024 302105;302106;302107 302105 3 SDPEELREPQQSFSEAQQQLCNTR Unmodified 2876.2995 0.29951244 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 70.131 70.311 3 0.025595 80832 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 19.538 12.262 10165000 0 0 0 0 0 0 0 5758500 0 0 0 0 0 4406400 0 45659 2446 40928 383025;383026 302108 302108 1 SDPEGENIHAGLLK Unmodified 1478.7365 0.73652168 2940 Q6P996 PDXDC1 Pyridoxal-dependent decarboxylase domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.29 6 1 24 2 3 2 2 2 2 2 2 2 2 2 2 2 2 2 47.903 46.724 2;3 5.7141E-40 52578 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 165.35 140.5 2017300000 29149000 534790000 24435000 65380000 60582000 133630000 100510000 97653000 83819000 126120000 148920000 149350000 174470000 117440000 170990000 45660 2940 40929 383027;383028;383029;383030;383031;383032;383033;383034;383035;383036;383037;383038;383039;383040;383041;383042;383043;383044;383045;383046;383047;383048;383049;383050;383051;383052;383053;383054;383055;383056;383057 302109;302110;302111;302112;302113;302114;302115;302116;302117;302118;302119;302120;302121;302122;302123;302124;302125;302126;302127;302128;302129;302130;302131 302109 18 SDPFLEFFRQGDGK Unmodified 1641.7787 0.77872084 4064 Q99829 CPNE1 Copine-1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 93.066 86.545 3 0.0083678 109852 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.527 37.265 50911000 23594000 27317000 0 0 0 0 0 0 0 0 0 0 0 0 0 45661 4064 40930 383058;383059 302132;302133 302133 2 SDPGLLTNTMDVFVK Unmodified 1635.8178 0.81780846 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 89.252 89.36 2 8.0993E-19 103415 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 134.13 123.9 56756000 0 0 0 0 2180400 2928300 1977900 4529600 2481800 5953700 5890300 4477900 1542500 5629000 19165000 45662 1986 40931 383060;383061;383062;383063;383064;383065;383066;383067;383068;383069;383070 302134;302135;302136;302137;302138;302139;302140;302141 302135 8 SDPGLLTNTMDVFVK Oxidation (M) 1651.8127 0.81272309 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 1 0 By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 79.494 79.506 2 0.0011533 91878 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 50.222 35.532 225360000 0 0 0 16421000 17431000 27569000 0 0 0 33367000 29768000 35275000 0 24328000 41201000 45663 1986 40931 383071;383072;383073;383074;383075;383076;383077;383078 302142;302143 302143 3235 1 SDPIQEIRDLAEITTLDRSK Unmodified 2299.202 0.20195387 4123 Q9BS26 ERP44 Endoplasmic reticulum resident protein 44 yes yes 0 0 2 By MS/MS By MS/MS 2.2 0.748 1 2 2 4 1 99.401 95.846 3;4 1.2339E-86 95840 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 159.74 151.94 83898000 77081000 6816600 0 0 0 0 0 0 0 0 0 0 0 0 0 45664 4123 40932 383079;383080;383081;383082;383083 302144;302145;302146;302147 302145 4 SDPLGHPNSEETVK Unmodified 1508.7107 0.71070086 4254 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 30.4 26.005 2 0.00082335 34031 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.658 53.237 10667000 0 10667000 0 0 0 0 0 0 0 0 0 0 0 0 0 45665 4254 40933 383084;383085 302148 302148 1 SDPLLIGIPTSENPFK Unmodified 1726.9142 0.91415169 4843 Q9UBI6 GNG12 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 91.13 91.231 2 0.000598 105896 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 84.605 76.3 49327000 0 0 0 0 2104100 1926600 0 4142000 2775600 8664500 4932600 5756800 1582200 4605900 12837000 45666 4843 40934 383086;383087;383088;383089;383090;383091;383092;383093;383094;383095 302149;302150;302151;302152;302153;302154;302155 302149 7 SDPMVQCIIEESGEHIIAGAGELHLEICLK Oxidation (M) 3363.6149 0.61489826 980 P13639 EEF2 Elongation factor 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.3 0.458 7 3 6 2 2 99.559 94.31 3;4 1.2748E-214 117241 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 201.08 195.97 1596000000 1401800000 154740000 39406000 0 0 0 0 0 0 0 0 0 0 0 0 45667 980 40935 383096;383097;383098;383099;383100;383101;383102;383103;383104;383105 302156;302157;302158;302159;302160;302161;302162;302163;302164 302160 1316 8 SDPMVQCIIEESGEHIIAGAGELHLEICLK Unmodified 3347.62 0.61998364 980 P13639 EEF2 Elongation factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.17 0.687 1 3 2 2 3 1 101.44 99.198 4 3.9155E-151 99283 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 153.97 141.97 516920000 299950000 196440000 20531000 0 0 0 0 0 0 0 0 0 0 0 0 45668 980 40935 383106;383107;383108;383109;383110;383111 302165;302166;302167;302168;302169;302170 302167 4 SDPNRETDDTLVLSFVGQTR Unmodified 2249.0924 0.09240342 2608 Q16531 DDB1 DNA damage-binding protein 1 yes yes 0 0 1 By MS/MS 10 0 1 1 83.064 83.254 3 0.00069285 96098 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.476 38.609 9231500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9231500 45669 2608 40936 383112 302171 302171 1 SDPPEGSEEAAEPR Unmodified 1469.627 0.62703081 5007 Q9ULV3 CIZ1 Cip1-interacting zinc finger protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 21.107 21.317 2 0.01069 22303 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 50.284 34.059 29705000 0 0 0 1961000 1500300 2149500 2463600 2099800 2536500 0 2617200 4210400 2625900 2657500 4883600 45670 5007 40937 383113;383114;383115;383116;383117;383118;383119;383120;383121;383122;383123 302172;302173;302174;302175 302172 4 SDPPTLLTPSK Unmodified 1154.6183 0.61830402 586 O94804 STK10 Serine/threonine-protein kinase 10 yes yes 0 0 0 By MS/MS 2 0 1 1 55.208 49.393 2 0.040293 63821 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.398 35.261 45301000 0 45301000 0 0 0 0 0 0 0 0 0 0 0 0 0 45671 586 40938 383124 302176 302176 1 SDPSIVRLLQCDPSSASQF Unmodified 2106.0052 0.0051683175 1388 P37235;P84074 HPCAL1;HPCA Hippocalcin-like protein 1;Neuron-specific calcium-binding protein hippocalcin yes no 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 91.358 87.674 2 3.2819E-40 108772 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 164.88 142.16 36910000 0 36394000 516470 0 0 0 0 0 0 0 0 0 0 0 0 45672 1388 40939 383125;383126 302177 302177 1 SDPTSYAGYIEDLK Unmodified 1557.7199 0.71986856 1744 P54709 ATP1B3 Sodium/potassium-transporting ATPase subunit beta-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.028 80.087 2 7.3795E-12 91901 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 102.4 95.864 85906000 0 0 0 1725500 3791300 6751700 4851700 6019000 5350700 8247000 6179300 9719000 7004300 8513400 17753000 45673 1744 40940 383127;383128;383129;383130;383131;383132;383133;383134;383135;383136;383137;383138 302178;302179;302180;302181;302182;302183;302184;302185;302186;302187;302188;302189;302190 302186 13 SDPTSYAGYIEDLKK Unmodified 1685.8148 0.81483158 1744 P54709 ATP1B3 Sodium/potassium-transporting ATPase subunit beta-3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 74.691 74.79 3 0.043776 86132 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 21.8 17.397 32232000 0 0 0 0 3842400 0 5446000 4282200 0 0 4441700 5739600 4015700 4464800 0 45674 1744 40941 383139;383140;383141;383142;383143;383144;383145 302191 302191 0 SDPVVSYR Unmodified 921.4556 0.45559579 980 P13639 EEF2 Elongation factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 30.11 30.319 2 0.0094921 32585 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 82.716 65.423 1056400000 0 0 0 55779000 33296000 0 34449000 35373000 28148000 56431000 125160000 126700000 54791000 135180000 371110000 45675 980 40942 383146;383147;383148;383149;383150;383151;383152;383153;383154;383155;383156 302192;302193;302194;302195;302196;302197;302198;302199;302200 302198 7 SDPVVSYRETVSEESNVLCLSK Unmodified 2497.2006 0.20063324 980 P13639 EEF2 Elongation factor 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS 4 3.23 5 2 2 4 2 1 1 1 80.798 77.455 3;4 3.9876E-74 93497 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 140.64 132.49 2188800000 539350000 922060000 683370000 0 0 0 0 0 0 0 9988000 0 0 0 34038000 45676 980 40943 383157;383158;383159;383160;383161;383162;383163;383164;383165 302201;302202;302203;302204;302205;302206;302207;302208;302209 302204 9 SDPYLEFHK Unmodified 1134.5346 0.53457439 458 O75131 CPNE3 Copine-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 46.339 46.076 2 0.0043186 58337 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 114.28 87.027 108620000 0 0 27835000 7312500 4087100 11749000 5867500 6950400 4338900 0 11914000 14035000 0 0 14534000 45677 458 40944 383166;383167;383168;383169;383170;383171;383172;383173;383174;383175;383176 302210;302211;302212;302213;302214;302215;302216;302217 302215 8 SDPYSTGHLR Unmodified 1131.5309 0.530886 441 O60885 BRD4 Bromodomain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 21.274 21.727 2 0.0044278 21563 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.879 62.465 30032000 0 0 0 0 0 0 0 0 0 0 5311300 0 11244000 4443000 9034400 45678 441 40945 383177;383178;383179;383180 302218;302219;302220 302218 3 SDQALNCGGTASTGSAGNVK Unmodified 1893.8487 0.84866768 139 O00287 RFXAP Regulatory factor X-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 18 2 2 2 1 2 1 2 2 1 2 1 26.743 26.961 2;3 2.5722E-78 28992 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 198.78 193.46 200800000 0 0 0 0 13856000 15128000 14396000 15450000 15449000 12213000 29620000 26034000 14177000 20976000 23504000 45679 139 40946 383181;383182;383183;383184;383185;383186;383187;383188;383189;383190;383191;383192;383193;383194;383195;383196;383197;383198 302221;302222;302223;302224;302225;302226;302227;302228;302229;302230;302231 302221 11 SDQDHSMDEMTAVVK Acetyl (Protein N-term);2 Oxidation (M) 1765.7135 0.71347933 856 P08047 SP1 Transcription factor Sp1 yes yes 1 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 25.984 26.236 2 1.327E-10 27889 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 92.866 86.207 185300000 0 0 0 15172000 0 11113000 19840000 11779000 14716000 17413000 17685000 17632000 26977000 15866000 17102000 45680 856 40947 383199;383200;383201;383202;383203;383204;383205;383206;383207;383208;383209 302232;302233;302234;302235;302236;302237;302238;302239;302240;302241;302242 302233 1079;1080 11 SDQDHSMDEMTAVVK Acetyl (Protein N-term);Oxidation (M) 1749.7186 0.7185647 856 P08047 SP1 Transcription factor Sp1 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.59 1.87 1 21 1 3 1 1 2 2 1 2 2 2 2 1 2 42.646 42.856 2 9.008E-29 51848 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 138.45 130.8 218790000 0 0 0 13764000 8684900 12416000 16396000 19541000 8405200 20748000 27893000 27033000 23865000 9637600 30402000 45681 856 40947 383210;383211;383212;383213;383214;383215;383216;383217;383218;383219;383220;383221;383222;383223;383224;383225;383226;383227;383228;383229;383230;383231 302243;302244;302245;302246;302247;302248;302249;302250;302251;302252;302253;302254;302255;302256;302257;302258;302259;302260;302261;302262;302263;302264 302258 1079;1080 21 SDQDHSMDEMTAVVK Acetyl (Protein N-term) 1733.7237 0.72365008 856 P08047 SP1 Transcription factor Sp1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 64.558 60.7 2 1.8585E-23 70462 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 121.18 108.17 86219000 8390700 0 0 0 0 0 0 0 0 0 0 0 0 0 77828000 45682 856 40947 383232;383233;383234 302265;302266;302267 302266 3 SDQDYILK Unmodified 980.48148 0.48147619 5067 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.87 3.56 1 2 1 11 1 3 1 1 1 1 1 1 1 1 1 1 1 45.692 44.738 2 0.009853 43754 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 81.548 39.453 3584500000 134040000 3233400000 0 6892800 4532100 5403100 6089900 7513800 4161600 6813600 34653000 22920000 0 28406000 89689000 45683 5067 40948 383235;383236;383237;383238;383239;383240;383241;383242;383243;383244;383245;383246;383247;383248;383249 302268;302269;302270;302271;302272;302273;302274;302275;302276;302277;302278;302279;302280;302281;302282 302279 15 SDQEAKPSTEDLGDK Acetyl (Protein N-term) 1660.7428 0.74278885 1942 P63165 SUMO1 Small ubiquitin-related modifier 1 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 30.533 30.674 2 5.0912E-27 32003 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 133.32 117.43 63560000 0 0 0 3226500 3807800 3993700 4119500 3597600 2798700 7170300 6506200 0 6623100 7515700 14201000 45684 1942 40949 383250;383251;383252;383253;383254;383255;383256;383257;383258;383259;383260 302283;302284;302285;302286;302287;302288;302289;302290;302291;302292;302293 302290 11 SDQEAKPSTEDLGDKK Acetyl (Protein N-term) 1788.8378 0.83775186 1942 P63165 SUMO1 Small ubiquitin-related modifier 1 yes yes 1 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 24.4 24.639 3 1.2914E-10 26255 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 86.548 79.015 82423000 0 0 0 8886600 9259600 0 8324100 4759400 0 0 9852500 10609000 7451800 8996500 14283000 45685 1942 40950 383261;383262;383263;383264;383265;383266;383267;383268;383269 302294;302295;302296;302297;302298;302299;302300;302301;302302;302303 302294 9 SDQGVEGPGGTGGSGSSPNDPVTNICQAADK Unmodified 2958.2897 0.28973561 1237 P28702 RXRB Retinoic acid receptor RXR-beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 61.674 61.731 3 1.7155E-33 70537 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.227 70.944 88262000 0 0 0 5553100 5714500 8199600 8154400 7032700 6643700 8475100 10268000 9756400 7981100 10484000 0 45686 1237 40951 383270;383271;383272;383273;383274;383275;383276;383277;383278;383279;383280 302304;302305;302306;302307;302308;302309;302310;302311;302312;302313;302314;302315;302316;302317 302314 14 SDQLLSSNENFTNK Unmodified 1595.7427 0.74272927 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 52.853 52.537 2 2.4423E-85 59469 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 193.28 173.68 544280000 0 51825000 0 23254000 28721000 31178000 39894000 35014000 28538000 42040000 47070000 61017000 48791000 35663000 71273000 45687 2556 40952 383281;383282;383283;383284;383285;383286;383287;383288;383289;383290;383291;383292;383293 302318;302319;302320;302321;302322;302323;302324;302325;302326 302319 6 SDQLQQAVQSQGFINYCQK Unmodified 2241.0484 0.048430116 614 O94979 SEC31A Protein transport protein Sec31A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 74.996 75.102 3 2.7414E-06 86267 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.421 63.602 75515000 0 0 0 0 4550900 6969500 3957100 4730500 0 9835700 7752400 11198000 3123100 5994000 17404000 45688 614 40953 383294;383295;383296;383297;383298;383299;383300;383301;383302;383303 302327;302328;302329;302330;302331;302332;302333;302334 302329 8 SDQMEPSPLASSLSDTNK Unmodified 1905.8626 0.86258641 2551 Q15596 NCOA2 Nuclear receptor coactivator 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 64.606 64.672 2 0.00061261 74201 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.875 46.268 22978000 0 0 0 1645900 0 2732800 3506200 2556100 0 2894000 0 3950300 2898100 2794800 0 45689 2551 40954 383304;383305;383306;383307;383308;383309;383310;383311 302335;302336;302337;302338 302335 4 SDQMEPSPLASSLSDTNK Oxidation (M) 1921.8575 0.85750103 2551 Q15596 NCOA2 Nuclear receptor coactivator 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 55.401 55.486 2 9.0877E-05 62805 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 62.042 47.807 34305000 0 0 0 2784200 2126700 0 3102700 3289700 2925900 2931400 5512200 4643400 3913200 3075300 0 45690 2551 40954 383312;383313;383314;383315;383316;383317;383318;383319;383320;383321 302339;302340;302341;302342;302343;302344;302345;302346 302344 4184 8 SDQNLQTALELTR Unmodified 1487.758 0.7579854 649 O95373 IPO7 Importin-7 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 72.956 73.059 2 1.2378E-11 84079 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 121.68 97.59 49261000 0 0 0 0 0 0 0 0 0 27280000 0 0 21980000 0 0 45691 649 40955 383322;383323 302347;302348;302349 302348 2 SDQNLQTALELTRR Unmodified 1643.8591 0.85909643 649 O95373 IPO7 Importin-7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 67.978 67.086 3 0.00096739 76575 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 49.31 49.31 236960000 14506000 0 9687600 7008100 8193300 30969000 8913100 17226000 0 0 20396000 16429000 16144000 21189000 66300000 45692 649 40956 383324;383325;383326;383327;383328;383329;383330;383331;383332;383333;383334;383335;383336 302350;302351;302352;302353;302354;302355;302356;302357;302358;302359;302360;302361;302362 302350 12 SDQQGEALDSSQK Unmodified 1391.6165 0.61646612 2661 Q32MZ4 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 12.674 12.504 2 3.5347E-09 11912 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 113.63 93.326 136520000 12782000 0 0 5029200 5623300 7960500 7278400 6013800 5568300 10869000 15140000 18895000 9575600 11266000 20520000 45693 2661 40957 383337;383338;383339;383340;383341;383342;383343;383344;383345;383346;383347;383348;383349 302363;302364;302365;302366;302367;302368;302369;302370;302371;302372;302373;302374;302375;302376;302377 302364 15 SDQQLDCALDLMR Acetyl (Protein N-term);Oxidation (M) 1621.7076 0.70760609 1525 P47756 CAPZB F-actin-capping protein subunit beta yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.788 78.846 2 3.498E-15 91271 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 144.17 128.91 273420000 0 0 0 18555000 23610000 14191000 20760000 11681000 19179000 17952000 32881000 38482000 24951000 20805000 30375000 45694 1525 40958 383350;383351;383352;383353;383354;383355;383356;383357;383358;383359;383360;383361 302378;302379;302380;302381;302382;302383;302384;302385;302386;302387;302388;302389;302390;302391;302392;302393;302394;302395;302396;302397 302393 2424 19 SDQQLDCALDLMR Acetyl (Protein N-term) 1605.7127 0.71269147 1525 P47756 CAPZB F-actin-capping protein subunit beta yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 90.352 90.423 2 5.2193E-08 104689 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 118.28 108.33 96401000 0 0 0 1269500 5391100 4776600 2731000 5344700 4571800 10211000 12086000 11006000 3982400 8245400 26785000 45695 1525 40958 383362;383363;383364;383365;383366;383367;383368;383369;383370;383371;383372;383373 302398;302399;302400;302401;302402;302403;302404;302405;302406;302407;302408;302409 302401 12 SDQSRLDSELK Unmodified 1276.6259 0.62590859 780;50 CON__ENSEMBL:ENSBTAP00000038253;P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.63 2.97 9 2 52 3 5 3 5 4 5 4 4 4 3 4 4 6 6 3 27.005 26.595 2;3 1.2357E-169 27931 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 236.42 162.16 + 133830000000 356940000 3289700000 161740000 18098000000 7833300000 8787300000 7127100000 21984000000 6089100000 10916000000 9156700000 14292000000 14323000000 6334600000 5080000000 45696 50;780 40959 383374;383375;383376;383377;383378;383379;383380;383381;383382;383383;383384;383385;383386;383387;383388;383389;383390;383391;383392;383393;383394;383395;383396;383397;383398;383399;383400;383401;383402;383403;383404;383405;383406;383407;383408;383409;383410;383411;383412;383413;383414;383415;383416;383417;383418;383419;383420;383421;383422;383423;383424;383425;383426;383427;383428;383429;383430;383431;383432;383433;383434;383435;383436 302410;302411;302412;302413;302414;302415;302416;302417;302418;302419;302420;302421;302422;302423;302424;302425;302426;302427;302428;302429;302430;302431;302432;302433;302434;302435;302436;302437;302438;302439;302440;302441;302442;302443;302444;302445;302446;302447;302448;302449;302450;302451;302452;302453;302454;302455;302456;302457;302458;302459;302460;302461;302462;302463;302464;302465;302466;302467;302468;302469;302470;302471;302472;302473;302474;302475 302453 51 SDQSYVISFVVPNQK Unmodified 1709.8625 0.86245047 403 O60488 ACSL4 Long-chain-fatty-acid--CoA ligase 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.89 2.72 3 1 24 3 1 2 2 2 2 2 2 2 2 2 2 2 2 83.59 83.099 2;3 5.3077E-20 96279 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 140.24 133.31 376540000 0 83495000 982490 5892200 12513000 18152000 13509000 24392000 17647000 33744000 32774000 44282000 23265000 21726000 44163000 45697 403 40960 383437;383438;383439;383440;383441;383442;383443;383444;383445;383446;383447;383448;383449;383450;383451;383452;383453;383454;383455;383456;383457;383458;383459;383460;383461;383462;383463;383464 302476;302477;302478;302479;302480;302481;302482;302483;302484;302485;302486;302487;302488;302489;302490;302491;302492 302478 16 SDQVITAINGIK Unmodified 1257.6929 0.69286595 3490 Q8TCS8 PNPT1 Polyribonucleotide nucleotidyltransferase 1, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 73.277 67.732 2 0.0070319 85811 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.862 54.052 69753000 0 69753000 0 0 0 0 0 0 0 0 0 0 0 0 0 45698 3490 40961 383465 302493 302493 1 SDQVNGVLVLSLLDK Unmodified 1598.8879 0.88793694 2911 Q6NZI2 PTRF Polymerase I and transcript release factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 97.603 94.096 2 0.00090412 112675 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 71.241 61.753 22283000 0 19978000 2304900 0 0 0 0 0 0 0 0 0 0 0 0 45699 2911 40962 383466;383467;383468;383469 302494;302495;302496;302497 302495 4 SDQWKPLNLEEK Unmodified 1485.7464 0.74635808 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 1 2 2 1 2 2 2 2 2 2 58.513 58.629 2;3 0.0027039 66697 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 74.392 74.392 311110000 0 0 0 24498000 20712000 4852100 29848000 34340000 8004800 21881000 32220000 48917000 28700000 24561000 32575000 45700 2102 40963 383470;383471;383472;383473;383474;383475;383476;383477;383478;383479;383480;383481;383482;383483;383484;383485;383486;383487;383488;383489;383490;383491 302498;302499;302500;302501;302502;302503;302504;302505;302506 302500 5 SDQYGRVFTSWTGGGAAASR Unmodified 2072.9664 0.96641505 75 CON__P15636 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 27 2 2 4 2 2 3 2 3 1 2 3 1 71.315 71.376 3 7.6342E-72 81072 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 155.86 146.46 + 3646100000 0 0 0 62851000 60011000 613650000 83263000 216210000 805150000 178290000 255710000 295050000 127430000 257820000 690620000 45701 75 40964 383492;383493;383494;383495;383496;383497;383498;383499;383500;383501;383502;383503;383504;383505;383506;383507;383508;383509;383510;383511;383512;383513;383514;383515;383516;383517;383518 302507;302508;302509;302510;302511;302512;302513;302514;302515;302516;302517;302518;302519;302520;302521;302522;302523;302524;302525;302526;302527;302528;302529;302530;302531;302532;302533;302534;302535;302536;302537;302538;302539;302540;302541;302542;302543;302544 302508 35 SDRLGQITK Acetyl (Protein N-term) 1058.572 0.57202253 2736 Q5JSZ5 PRRC2B Protein PRRC2B yes yes 1 0 1 By MS/MS By MS/MS 10 0 2 1 1 39.264 39.489 2 0.039678 43988 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 45.022 8.6407 8292800 0 0 0 0 0 0 0 0 0 4960300 0 0 0 3332500 0 45702 2736 40965 383519;383520 302545;302546 302545 2 SDSDLGEDEGLLSLAGK Acetyl (Protein N-term) 1746.816 0.81595379 4296 Q9GZN2 TGIF2 Homeobox protein TGIF2 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 88.564 88.624 2 1.4629E-32 102635 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 123.84 113.18 43195000 0 0 0 1313400 3646500 3257500 3363500 3530600 0 5143600 4810500 5667100 3605800 3162700 5693900 45703 4296 40966 383521;383522;383523;383524;383525;383526;383527;383528;383529;383530;383531;383532 302547;302548;302549;302550;302551;302552;302553;302554;302555;302556;302557;302558;302559;302560;302561 302551 15 SDSDYDLSPK Unmodified 1125.4826 0.4825984 2159 Q08499;Q07343 PDE4D;PDE4B cAMP-specific 3',5'-cyclic phosphodiesterase 4D;cAMP-specific 3',5'-cyclic phosphodiesterase 4B yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 30.808 31.202 2 0.0029415 32945 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.556 62.017 27664000 0 0 0 0 0 0 0 0 0 4770400 5509200 0 5288600 5231600 6864300 45704 2159 40967 383533;383534;383535;383536;383537 302562;302563;302564;302565;302566;302567;302568 302564 7 SDSEDICLFTK Unmodified 1313.5809 0.58093224 571 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 66.406 66.279 2 0.0032462 76267 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 64.374 51.847 18637000 0 0 0 1290300 2543000 0 0 0 0 0 0 0 7164200 0 7639700 45705 571 40968 383538;383539;383540;383541 302569;302570;302571 302570 3 SDSEGSDYTPGK Unmodified 1241.5048 0.50479041 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 13.929 14.121 2 0.0091321 12618 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 48.091 42.889 21384000 0 0 0 0 898660 2019000 1868500 826080 0 2302600 2778500 2369700 1729800 2122400 4468900 45706 2451 40969 383542;383543;383544;383545;383546;383547;383548;383549;383550;383551 302572;302573 302572 2 SDSFENPVLQQHFR Unmodified 1702.8063 0.80633258 973 P12956 XRCC6 X-ray repair cross-complementing protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 2 1 2 2 67.8 67.879 2;3 1.0169E-117 77226 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 244.27 239.17 2310800000 0 0 0 104720000 73279000 174040000 135670000 154380000 132270000 185420000 231570000 285230000 178590000 220510000 435150000 45707 973 40970 383552;383553;383554;383555;383556;383557;383558;383559;383560;383561;383562;383563;383564;383565;383566;383567;383568;383569;383570;383571;383572;383573;383574 302574;302575;302576;302577;302578;302579;302580;302581;302582;302583;302584;302585;302586;302587;302588;302589;302590;302591;302592;302593;302594;302595;302596;302597;302598;302599 302580 23 SDSFYFVDNK Unmodified 1220.535 0.53496832 29 A6NIH7 UNC119B Protein unc-119 homolog B yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 63.58 63.664 2 0.0094732 72063 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.708 47.016 7954800 0 0 0 0 1811700 0 0 0 0 0 0 0 0 2044200 4098900 45708 29 40971 383575;383576;383577;383578 302600;302601 302601 2 SDSGGSSSEPFDR Unmodified 1326.5324 0.53240214 1546 P48634 PRRC2A Protein PRRC2A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.143 23.35 2 0.013125 23142 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 53.237 36.606 82800000 0 0 0 4407000 5509100 5572700 5295500 4223500 3710100 7974600 9146000 11328000 9174900 6499000 9958800 45709 1546 40972 383579;383580;383581;383582;383583;383584;383585;383586;383587;383588;383589;383590 302602;302603;302604;302605 302603 4 SDSGKPYYYNSQTK Unmodified 1636.7369 0.73691561 494 O75400 PRPF40A Pre-mRNA-processing factor 40 homolog A yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 21.524 21.739 3 0.001306 22625 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 53.491 49.175 190960000 0 0 0 14531000 10562000 6003600 24550000 0 0 15371000 27025000 26624000 24478000 15005000 26805000 45710 494 40973 383591;383592;383593;383594;383595;383596;383597;383598;383599;383600 302606;302607;302608;302609;302610 302606 4 SDSGTAAQTSLDIDK Unmodified 1507.7002 0.70019575 3969 Q96RL1 UIMC1 BRCA1-A complex subunit RAP80 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 40.735 40.915 2 1.9337E-27 45134 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 136.7 115.83 59670000 0 0 0 3541000 2256300 4969900 3282800 0 3446600 6588300 7015000 5643400 7793300 5330500 9802800 45711 3969 40974 383601;383602;383603;383604;383605;383606;383607;383608;383609;383610;383611 302611;302612;302613;302614;302615;302616;302617;302618;302619;302620;302621;302622 302619 12 SDSHPSDALTR Unmodified 1184.5422 0.54217896 1591 P49748 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 1 2 2 2 2 2 2 2 1 2 14.188 14.356 2;3 0.017825 13702 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 43.77 34.907 180130000 0 0 0 12235000 11769000 6896500 8821500 8881600 7439700 21308000 24393000 25983000 19868000 10453000 22081000 45712 1591 40975 383612;383613;383614;383615;383616;383617;383618;383619;383620;383621;383622;383623;383624;383625;383626;383627;383628;383629;383630;383631;383632;383633 302623;302624 302623 2 SDSHPSDALTRK Unmodified 1312.6371 0.63714198 1591 P49748 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10.892 10.358 3 0.0015466 9170 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 61.11 41.867 301740000 29842000 11304000 42715000 13458000 9111800 12285000 13631000 9941400 10338000 17865000 34729000 27619000 18443000 15432000 35024000 45713 1591 40976 383634;383635;383636;383637;383638;383639;383640;383641;383642;383643;383644;383645;383646;383647;383648 302625;302626;302627;302628;302629;302630;302631;302632;302633;302634;302635;302636 302626 10 SDSILLTHDGRVK Unmodified 1439.7732 0.77324153 714 O96013 PAK4 Serine/threonine-protein kinase PAK 4 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 43.956 38.626 3 0.001252 52981 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.326 71.408 52550000 44130000 0 8420300 0 0 0 0 0 0 0 0 0 0 0 0 45714 714 40977 383649;383650 302637;302638;302639 302637 3 SDSLLSFR Unmodified 923.47125 0.47124585 2039 Q00587 CDC42EP1 Cdc42 effector protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.014 66.1 2 0.006867 75991 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 93.195 74.505 151480000 0 0 0 7039500 6871000 10225000 11995000 14606000 9567300 13845000 15092000 17423000 14251000 11834000 18729000 45715 2039 40978 383651;383652;383653;383654;383655;383656;383657;383658;383659;383660;383661;383662 302640;302641;302642;302643 302640 3 SDSNLGGHSIRCK Unmodified 1429.6732 0.67320991 2456 Q14966 ZNF638 Zinc finger protein 638 yes yes 0 0 1 By MS/MS 2 0 1 1 18.903 14.319 3 0.010105 20886 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.139 50.419 19930000 19930000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45716 2456 40979 383663 302644 302644 1 SDSNPLTEILK Unmodified 1215.6347 0.63468237 3874 Q96I25 RBM17 Splicing factor 45 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 82.542 82.58 2 0.0033734 95615 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 64.064 49.858 41630000 0 0 0 1079300 2442900 6000500 2219800 3243800 4221100 6690100 7577400 8154900 0 0 0 45717 3874 40980 383664;383665;383666;383667;383668;383669;383670;383671;383672 302645;302646;302647;302648;302649;302650 302648 6 SDSNQYIGELK Unmodified 1252.5935 0.59354583 401 O60447 EVI5 Ecotropic viral integration site 5 protein homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 48.32 47.709 2 0.011889 53883 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 48.091 27.466 41495000 0 14585000 0 2211800 2442300 4630500 2523800 0 3121300 4177500 0 0 0 2674500 5128300 45718 401 40981 383673;383674;383675;383676;383677;383678;383679;383680;383681;383682 302651;302652;302653 302651 3 SDSPAIQLR Unmodified 985.51926 0.51925868 3994 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 41.838 41.593 2 0.004831 52210 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.41 98.041 412080000 0 46634000 0 20215000 20303000 27686000 27747000 31328000 20736000 32846000 34878000 39412000 36991000 28729000 44571000 45719 3994 40982 383683;383684;383685;383686;383687;383688;383689;383690;383691;383692;383693;383694;383695 302654;302655;302656;302657;302658;302659;302660;302661;302662;302663;302664;302665;302666;302667;302668 302658 11 SDSPAIQLRLK Unmodified 1226.6983 0.69828568 3994 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 64.482 58.454 3 0.018535 79096 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.44 38.597 34395000 30127000 0 4268500 0 0 0 0 0 0 0 0 0 0 0 0 45720 3994 40983 383696;383697 302669;302670;302671 302670 3 SDSPESDAEREK Unmodified 1348.5743 0.57426695 494 O75400 PRPF40A Pre-mRNA-processing factor 40 homolog A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 9.2843 9.3692 3 0.010011 7624 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 44.616 36.86 17247000 0 0 0 0 3139400 2590300 0 2703600 2202500 2619600 0 0 3992000 0 0 45721 494 40984 383698;383699;383700;383701;383702;383703 302672;302673;302674 302674 3 SDSPSVGETERNSAEPAAVIVEK Unmodified 2371.1503 0.15031223 4213 Q9BWT3 PAPOLG Poly(A) polymerase gamma yes yes 0 0 1 By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 6 1 1 1 1 1 1 55.94 55.878 3 0.0038083 63494 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 27.542 19.83 19561000 0 0 0 2964800 2677900 0 3472400 2642800 0 2904800 4898000 0 0 0 0 45722 4213 40985 383704;383705;383706;383707;383708;383709 302675;302676 302675 2 SDSPTGDVLLDETLK Unmodified 1588.7832 0.7831971 4395 Q9H4A5 GOLPH3L Golgi phosphoprotein 3-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 77.962 77.397 2 9.0949E-19 89108 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.09 83.365 320200000 0 238910000 0 4038100 3768700 0 6575200 5436000 4623000 9904700 10735000 8239800 6730700 7294700 13942000 45723 4395 40986 383710;383711;383712;383713;383714;383715;383716;383717;383718;383719;383720;383721;383722 302677;302678;302679;302680;302681;302682;302683;302684;302685;302686;302687;302688 302680 12 SDSPTSLPENNMSDVSQLK Unmodified 2047.9368 0.93681398 5068 Q9UQ84 EXO1 Exonuclease 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 67.258 67.618 2 9.5143E-05 77503 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 71.548 48.322 19896000 0 0 0 0 0 0 0 0 0 0 5533800 5304700 0 3478900 5578900 45724 5068 40987 383723;383724;383725;383726 302689;302690 302690 2 SDSPVPTAPTSGGPK Unmodified 1396.6834 0.68342347 3141 Q86U44 METTL3 N6-adenosine-methyltransferase 70 kDa subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.07 37.252 2 0.0060671 41717 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 41.48 31.699 94088000 0 0 0 5651800 5305100 6541600 6287400 6315500 5361900 8693800 8835600 11390000 8021200 9399000 12285000 45725 3141 40988 383727;383728;383729;383730;383731;383732;383733;383734;383735;383736;383737;383738 302691;302692;302693;302694;302695;302696 302695 6 SDSQTPSPNEIK Unmodified 1301.6099 0.60992418 4741 Q9NYD6 HOXC10 Homeobox protein Hox-C10 yes yes 0 0 0 By MS/MS 10 0 1 1 27.435 27.461 2 0.046169 29521 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 54.419 39.554 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45726 4741 40989 383739 302697 302697 1 SDSSLETMENTGVMDK Unmodified 1742.7339 0.73388042 5102 Q9Y2H2 INPP5F Phosphatidylinositide phosphatase SAC2 yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 58.24 58.572 2 7.6932E-05 66099 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.745 81.115 17665000 0 0 0 0 0 0 0 3651700 0 2806700 0 3355300 0 3506600 4345100 45727 5102 40990 383740;383741;383742;383743;383744 302698;302699 302698 1 SDSVTPVTVAVITCK Unmodified 1575.8178 0.81780846 4767 Q9NZH8 IL36G Interleukin-36 gamma yes yes 0 0 0 By MS/MS 10 0 1 1 75.714 75.193 2 3.5514E-14 87161 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 99.5 75.513 13913000 0 0 0 13913000 0 0 0 0 0 0 0 0 0 0 0 45728 4767 40991 383745 302700 302700 1 SDSYVELSQYR Unmodified 1345.615 0.61500956 1684 P52298 NCBP2 Nuclear cap-binding protein subunit 2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 57.274 57.481 2 0.00062376 65499 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 79.148 65.379 17315000 0 0 0 0 0 0 0 0 0 0 0 0 8592100 8723200 0 45729 1684 40992 383746;383747 302701;302702 302702 2 SDTAAAAVR Unmodified 860.43519 0.4351947 1137 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 10.063 10.182 2 0.018066 8000 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 113.5 70.433 105790000 0 0 0 8631900 3652900 13045000 0 0 6323900 8763000 0 11314000 8335400 13247000 32473000 45730 1137 40993 383748;383749;383750;383751;383752;383753;383754;383755;383756 302703;302704 302704 0 SDTAVADTR Acetyl (Protein N-term) 976.44615 0.44615331 5022 Q9UMY4 SNX12 Sorting nexin-12 yes yes 1 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 23.244 23.44 2 0.0032072 25016 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 65.305 38.168 76377000 0 0 0 4457500 3558000 6453300 5519000 6704000 3415400 9247700 8844600 9697100 6901600 0 11579000 45731 5022 40994 383757;383758;383759;383760;383761;383762;383763;383764;383765;383766;383767 302705;302706 302705 2 SDTAVADTRR Acetyl (Protein N-term) 1132.5473 0.54726434 5022 Q9UMY4 SNX12 Sorting nexin-12 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 19.156 19.341 2 1.1768E-05 18659 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 145.72 117.55 169110000 0 0 0 9092300 8061700 20882000 0 10656000 7125300 24067000 0 23444000 16073000 19786000 29924000 45732 5022 40995 383768;383769;383770;383771;383772;383773;383774;383775;383776;383777 302707;302708;302709;302710;302711;302712;302713;302714 302708 8 SDTDTGVCSGTDEDPDDK Unmodified 1912.7116 0.71162465 2734 Q5JSH3 WDR44 WD repeat-containing protein 44 yes yes 0 0 0 By MS/MS 1 0 1 1 106.29 107.19 2 2.3116E-17 99165 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 131.35 118.15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45733 2734 40996 383778 302715 302715 1 SDTDVSMPLVEER Unmodified 1476.6766 0.67662354 2780 Q5T6V5 C9orf64 UPF0553 protein C9orf64 yes yes 0 0 0 By MS/MS 10 0 1 1 65.478 66.015 2 0.00096842 74896 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.507 59.29 15092000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15092000 45734 2780 40997 383779 302716 302716 1 SDTFINLR Unmodified 964.49779 0.49779495 1057 P17655 CAPN2 Calpain-2 catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 61.123 61.205 2 0.0087129 71053 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 85.265 69.766 113120000 0 0 0 8506100 8425400 13330000 11861000 0 0 0 15527000 14245000 11046000 8732200 21442000 45735 1057 40998 383780;383781;383782;383783;383784;383785;383786;383787;383788 302717;302718 302718 2 SDTNMEQVPATNDTIK Unmodified 1762.8043 0.80434324 318 O43318 MAP3K7 Mitogen-activated protein kinase kinase kinase 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 47.005 47.248 2 1.6739E-19 52210 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 108.68 89.875 54211000 0 0 0 0 2447200 6169100 3583200 4749100 0 7117800 6321600 5003600 6363400 4517100 7938600 45736 318 40999 383789;383790;383791;383792;383793;383794;383795;383796;383797;383798 302719;302720;302721;302722;302723;302724;302725;302726 302721 8 SDTPLIYK Unmodified 935.4964 0.49639797 1441 P41252 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 43.222 43.458 2 0.0064875 47302 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.45 78.704 315440000 0 0 0 12545000 0 27062000 19411000 23102000 15017000 26408000 38799000 42942000 18369000 30843000 60939000 45737 1441 41000 383799;383800;383801;383802;383803;383804;383805;383806;383807;383808;383809 302727;302728;302729;302730;302731;302732;302733;302734;302735;302736;302737;302738 302730 11 SDTQLVVR Unmodified 916.49779 0.49779495 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By matching 10 0 7 1 1 1 1 1 1 1 30.184 30.214 2 0.0067687 33016 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 97.798 51.372 120410000 0 0 0 17205000 16696000 17073000 0 17298000 10169000 22975000 18990000 0 0 0 0 45738 3641 41001 383810;383811;383812;383813;383814;383815;383816 302739;302740 302739 1 SDTSESGAGLTR Acetyl (Protein N-term) 1221.5473 0.54732392 5031 Q9UNF1 MAGED2 Melanoma-associated antigen D2 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.71 3.15 1 6 1 1 1 1 1 1 1 37.12 37.936 2 7.8461E-06 30021 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 118.4 107.25 554000000 2647700 0 0 0 74121000 0 87746000 80774000 81851000 119820000 0 0 107040000 0 0 45739 5031 41002 383817;383818;383819;383820;383821;383822;383823 302741;302742;302743;302744;302745;302746;302747;302748;302749;302750;302751;302752;302753 302741 13 SDTSESGAGLTRFQAEASEK Acetyl (Protein N-term) 2111.9607 0.96072055 5031 Q9UNF1 MAGED2 Melanoma-associated antigen D2 yes yes 1 0 1 By MS/MS By MS/MS By matching 2 0.577 1 4 1 2 3 1 70.595 66.7 2;3 4.2885E-151 73854 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 216.99 198.92 241220000 39594000 196460000 5164100 0 0 0 0 0 0 0 0 0 0 0 0 45740 5031 41003 383824;383825;383826;383827;383828;383829 302754;302755;302756;302757;302758 302754 4 SDTSGDYEITLLK Unmodified 1440.6984 0.69840484 968 P12429 ANXA3 Annexin A3 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS 5.71 3.73 2 2 3 2 2 1 1 1 76.807 74.032 2 0.00016927 88878 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 114.83 96.054 779930000 18508000 729030000 0 0 0 0 0 0 0 0 6658900 0 0 5845100 19890000 45741 968 41004 383830;383831;383832;383833;383834;383835;383836 302759;302760;302761;302762 302761 4 SDTSGHFER Unmodified 1034.4417 0.44173664 1100 P20073 ANXA7 Annexin A7 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 10 0 9 1 1 2 1 1 1 1 1 7.8955 8.0838 2 0.016637 5794 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 88.37 62.919 30853000 0 0 0 0 0 666210 4303000 0 0 1013500 3621700 6836800 4824400 7417400 2170200 45742 1100 41005 383837;383838;383839;383840;383841;383842;383843;383844;383845 302763;302764;302765 302763 3 SDTSGHFQR Unmodified 1033.4577 0.45772105 1643 P50995 ANXA11 Annexin A11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 7.0391 7.1099 2 0.011979 4938 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 61.999 50.094 18682000 0 0 0 2260600 1371300 3336400 2275100 3525600 0 0 0 0 0 1791300 4121400 45743 1643 41006 383846;383847;383848;383849;383850;383851;383852 302766;302767;302768;302769;302770;302771 302771 6 SDTTDSSQGLQDK Unmodified 1380.6005 0.6004817 392 O60293 ZFC3H1 Zinc finger C3H1 domain-containing protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 11.944 12.093 2 3.701E-05 9916 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 108.7 89.917 47055000 0 0 0 2662300 3618700 4422000 4657900 3067500 3216100 5281700 1976900 3214300 6241900 4561700 4134500 45744 392 41007 383853;383854;383855;383856;383857;383858;383859;383860;383861;383862;383863;383864 302772;302773;302774;302775;302776;302777;302778;302779;302780;302781 302777 10 SDTVADIESEPVVESTETEGT Unmodified 2193.9649 0.96486245 5050 Q9UPN6 SCAF8 Protein SCAF8 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS 9.31 2.4 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 76.141 76.602 2;3 5.1053E-10 85017 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 115.33 112.29 199570000 4697300 0 0 9799000 15284000 11826000 13580000 16159000 15731000 17289000 18915000 21490000 14335000 15094000 25372000 45745 5050 41008 383865;383866;383867;383868;383869;383870;383871;383872;383873;383874;383875;383876;383877 302782;302783;302784;302785;302786;302787;302788;302789;302790 302785 9 SDTWSSIQAHK Acetyl (Protein N-term) 1300.6048 0.60477922 3141 Q86U44 METTL3 N6-adenosine-methyltransferase 70 kDa subunit yes yes 1 0 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 53.201 50.641 2 0.011416 64270 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 56.729 32.574 78641000 0 69703000 0 0 0 0 0 0 0 0 0 0 0 0 8937500 45746 3141 41009 383878;383879;383880 302791;302792;302793 302791 3 SDVASVNWSAPSQAFPR Unmodified 1817.8697 0.86966111 4152 Q9BTW9 TBCD Tubulin-specific chaperone D yes yes 0 0 0 By MS/MS By matching By matching By matching By matching 10 0 5 1 1 1 1 1 77.764 77.938 2 0.0050597 90080 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 40.066 27.299 25842000 0 0 0 0 0 0 0 0 0 6305900 4309800 4282300 0 3504600 7439700 45747 4152 41010 383881;383882;383883;383884;383885 302794 302794 1 SDVCTPGGTTIYGLHALEQGGLR Unmodified 2401.1696 0.16960788 2705 Q53H96 PYCRL Pyrroline-5-carboxylate reductase 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 81.33 81.494 3 2.5011E-08 94027 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.356 55.285 31135000 0 0 0 0 0 0 0 0 6759500 11137000 0 0 0 0 13238000 45748 2705 41011 383886;383887;383888 302795;302796;302797 302796 3 SDVEAIFSK Unmodified 994.49713 0.49712625 851 P07910;P0DMR1;O60812;B7ZW38;B2RXH8 HNRNPC;HNRNPCL4;HNRNPCL1;HNRNPCL3;HNRNPCL2 Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.52 3.05 3 1 17 1 2 1 1 2 1 2 2 1 1 2 2 2 1 59.361 58.359 1;2 0.0035398 66745 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 94.85 71.83 2032500000 37957000 1318800000 31479000 35388000 31517000 44897000 39154000 30451000 33879000 59703000 0 79429000 83277000 93934000 112620000 45749 851 41012 383889;383890;383891;383892;383893;383894;383895;383896;383897;383898;383899;383900;383901;383902;383903;383904;383905;383906;383907;383908;383909 302798;302799;302800;302801;302802;302803;302804;302805;302806;302807;302808;302809;302810;302811;302812 302799 9 SDVEIPATVTAFSFEDDTVPLSPLK Unmodified 2677.3374 0.3374443 4874 Q9UEY8 ADD3 Gamma-adducin yes yes 0 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 3 1 98.415 94.607 2;3 1.7505E-30 116408 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.79 97.218 151260000 0 145880000 5388000 0 0 0 0 0 0 0 0 0 0 0 0 45750 4874 41013 383910;383911;383912;383913 302813;302814;302815;302816;302817;302818 302813 6 SDVFTNSEK Unmodified 1025.4666 0.46655441 160 O00471 EXOC5 Exocyst complex component 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.64 2.9 1 1 9 2 1 1 1 1 1 1 1 1 1 21.972 21.334 2 0.0012746 26464 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.22 113.98 110130000 0 58726000 0 0 3951400 5311600 4474900 0 0 11059000 0 7743200 6813400 6244700 5806600 45751 160 41014 383914;383915;383916;383917;383918;383919;383920;383921;383922;383923;383924 302819;302820;302821;302822;302823;302824;302825;302826;302827 302823 9 SDVLTTPWK Unmodified 1045.5444 0.5444108 1159 P23458 JAK1 Tyrosine-protein kinase JAK1 yes yes 0 0 0 By MS/MS 2 0 1 1 71.089 65.273 2 0.037403 83040 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.743 59.849 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45752 1159 41015 383925 302828 302828 1 SDVPIQLLSATNQFQR Unmodified 1815.9479 0.94791144 3012 Q6ZSZ5 ARHGEF18 Rho guanine nucleotide exchange factor 18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 2 1 1 1 2 1 86.353 86.44 2;3 0.00022956 100428 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 83.617 51.775 27197000 0 0 0 0 1422600 1766700 1773300 0 0 8751600 2771200 2864500 0 0 7847500 45753 3012 41016 383926;383927;383928;383929;383930;383931;383932;383933;383934;383935 302829;302830;302831;302832;302833 302833 5 SDVPVYLK Unmodified 919.50148 0.50148335 2759 Q5SW79 CEP170 Centrosomal protein of 170 kDa yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 51.232 51.462 2 0.045385 58323 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 48.561 26.324 50183000 0 0 0 0 0 8443600 10549000 0 6809200 8557500 0 0 0 0 15824000 45754 2759 41017 383936;383937;383938;383939;383940 302834 302834 1 SDVSPIIQPVPSIK Unmodified 1478.8344 0.83444481 1420 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 77.64 76.607 2 1.1776E-38 94456 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 160.16 146.57 646560000 11565000 549680000 0 4342200 3476000 4462800 5908800 5771600 3489100 6758600 9426900 10834000 4959800 7360900 18530000 45755 1420 41018 383941;383942;383943;383944;383945;383946;383947;383948;383949;383950;383951;383952;383953;383954;383955 302835;302836;302837;302838;302839;302840;302841;302842;302843;302844;302845;302846;302847;302848;302849;302850 302839 16 SDVTNQLVDFQWK Unmodified 1578.7678 0.7678218 3096 Q7Z4G1 COMMD6 COMM domain-containing protein 6 yes yes 0 0 0 By MS/MS 2 0 2 2 85.709 83.301 2 1.1773E-33 103188 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 173.64 159.22 66532000 0 66532000 0 0 0 0 0 0 0 0 0 0 0 0 0 45756 3096 41019 383956;383957 302851 302851 1 SDVVGSLALQSVGESR Unmodified 1602.8213 0.82131394 2305 Q13506 NAB1 NGFI-A-binding protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 74.362 74.567 2 0.00051787 85535 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.486 62.523 24667000 0 0 0 0 0 0 0 3337800 0 4774000 0 6009200 0 5199700 5345800 45757 2305 41020 383958;383959;383960;383961;383962 302852;302853;302854;302855 302853 4 SDVVYTDWK Unmodified 1111.5186 0.51858998 760 P02763 ORM1 Alpha-1-acid glycoprotein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 54.712 54.055 2 0.009002 62054 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 67.993 47.472 11283000 0 0 0 11283000 0 0 0 0 0 0 0 0 0 0 0 45758 760 41021 383963 302856 302856 1 SDVVYTDWKK Unmodified 1239.6136 0.61355299 760 P02763 ORM1 Alpha-1-acid glycoprotein 1 yes yes 0 0 1 By MS/MS By matching 10 0 2 1 1 42.069 42.182 3 0.03073 47875 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 25.342 19.156 14131000 0 0 0 11181000 0 0 0 0 0 0 0 2950500 0 0 0 45759 760 41022 383964;383965 302857 302857 1 SDVYYFSPSGK Unmodified 1248.5663 0.56626845 4832 Q9UBB5 MBD2 Methyl-CpG-binding domain protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 56.337 56.05 2 0.0047166 71093 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.16 65.391 225020000 201380 126150000 0 6852100 7420900 6610900 5041400 7140500 5636900 10261000 8345900 9901700 9868100 10242000 11341000 45760 4832 41023 383966;383967;383968;383969;383970;383971;383972;383973;383974;383975;383976;383977;383978;383979;383980 302858;302859;302860;302861;302862;302863;302864;302865;302866;302867;302868 302859 11 SDWQLIVELK Unmodified 1229.6656 0.66558856 437 O60841 EIF5B Eukaryotic translation initiation factor 5B yes yes 0 0 0 By MS/MS 2 0 1 1 93.321 85.19 2 0.011227 110297 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.233 60.706 5657700 5657700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45761 437 41024 383981 302869 302869 1 SDWRQCQISK Unmodified 1306.6088 0.60881874 2862 Q69YN2 CWF19L1 CWF19-like protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 32.001 26.158 3 0.019807 36817 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 44.564 29.533 24735000 24735000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45762 2862 41025 383982 302870;302871 302871 2 SDYAQLLEDMQNAFRSLED Unmodified 2244.0005 0.0004768701 1398 P38606 ATP6V1A V-type proton ATPase catalytic subunit A yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 4 2 2 4 102.11 96.668 2;3 3.4437E-293 120902 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 338.12 332.94 299090000 137670000 161420000 0 0 0 0 0 0 0 0 0 0 0 0 0 45763 1398 41026 383983;383984;383985;383986;383987;383988 302872;302873;302874;302875;302876 302872 3 SDYDGIGSR Unmodified 968.41994 0.41993856 170 O00571 DDX3X ATP-dependent RNA helicase DDX3X yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 23.059 23.252 2 0.0080109 23469 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.856 49.085 115990000 0 0 0 8341300 8268500 13796000 7297900 4857500 5238800 9232800 13074000 13423000 0 14716000 17745000 45764 170 41027 383989;383990;383991;383992;383993;383994;383995;383996;383997;383998;383999 302877;302878 302877 2 SDYDGIGSRGDR Unmodified 1296.5695 0.56945635 170 O00571 DDX3X ATP-dependent RNA helicase DDX3X yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.65 19.851 3 0.0056829 19357 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 51.013 34.24 260000000 0 0 0 17291000 15594000 19082000 18942000 17729000 16110000 22981000 25144000 32550000 25136000 15432000 34009000 45765 170 41028 384000;384001;384002;384003;384004;384005;384006;384007;384008;384009;384010;384011 302879;302880;302881;302882;302883;302884;302885;302886;302887;302888;302889 302885 9 SDYDMVDYLNELR Oxidation (M) 1647.7087 0.70865195 2457 Q14974 KPNB1 Importin subunit beta-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 2 1 1 1 1 2 1 2 78.199 78.343 2 7.7571E-05 89544 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 84.658 77.53 92157000 0 0 0 0 0 11353000 3403900 0 0 11169000 8935400 6498600 12433000 9795600 28569000 45766 2457 41029 384012;384013;384014;384015;384016;384017;384018;384019;384020;384021;384022 302890;302891;302892;302893;302894;302895;302896;302897;302898;302899;302900 302897 4044 10 SDYDMVDYLNELR Unmodified 1631.7137 0.71373732 2457 Q14974 KPNB1 Importin subunit beta-1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 88.893 89.016 2 0.00087805 102974 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.397 76.016 6833900 0 0 0 0 0 0 0 0 0 0 0 0 0 1188500 5645400 45767 2457 41029 384023;384024 302901 302901 1 SDYDMVDYLNELRESCLEAYTGIVQGLK Unmodified 3280.5268 0.52679476 2457 Q14974 KPNB1 Importin subunit beta-1 yes yes 0 0 1 By MS/MS 2 0 1 1 100.75 92.622 3 3.5917E-15 119311 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.665 72.462 9474800 9474800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45768 2457 41030 384025 302902 302902 1 SDYLNTFEFMDK Unmodified 1508.6493 0.64934615 552 O75874 IDH1 Isocitrate dehydrogenase [NADP] cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 85.53 84.68 2 0.00067768 97878 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.549 80.792 56998000 0 17141000 0 0 0 0 0 0 0 0 3247900 3261600 0 2882800 30465000 45769 552 41031 384026;384027;384028;384029;384030 302903;302904;302905;302906;302907 302904 5 SDYLNTFEFMDK Oxidation (M) 1524.6443 0.64426077 552 O75874 IDH1 Isocitrate dehydrogenase [NADP] cytoplasmic yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 77.368 77.446 2 0.0064469 89777 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 47.302 42.408 73957000 0 0 0 5135300 0 0 3043100 3287400 0 0 12396000 0 0 9045300 41050000 45770 552 41031 384031;384032;384033;384034;384035;384036 302908;302909;302910;302911 302911 718 4 SDYSEAAK Unmodified 869.37668 0.37667677 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching 10 0 7 1 1 1 1 1 1 1 7.264 7.3588 2 0.049796 5414 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 46.994 37.981 17466000 0 0 0 0 1751600 3707700 2631300 2837100 2513900 0 2271800 1752000 0 0 0 45771 1986 41032 384037;384038;384039;384040;384041;384042;384043 302912 302912 1 SDYSTGGPPPGPPPPAGGGGGAGGAGGGPPPGPPGAGDR Acetyl (Protein N-term) 3245.4762 0.47623125 3690 Q92945 KHSRP Far upstream element-binding protein 2 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 68.6 68.531 3 4.7692E-46 78901 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 64.318 61.779 62330000 0 0 0 9065100 7411100 0 9352400 5104200 0 17330000 14067000 0 0 0 0 45772 3690 41033 384044;384045;384046;384047;384048;384049 302913;302914;302915;302916;302917;302918;302919 302918 6 SEAAGSPDQGSTYSPAR Unmodified 1679.7387 0.73870652 3985 Q96S66 CLCC1 Chloride channel CLIC-like protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 25.065 25.43 2 4.8686E-19 26719 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 103.88 93.927 13159000 0 0 0 0 1666600 0 0 0 0 0 2212600 4063900 2177500 0 3038700 45773 3985 41034 384050;384051;384052;384053;384054 302920;302921;302922 302922 3 SEAASPALPVITK Unmodified 1282.7133 0.71326704 4073 Q99958 FOXC2 Forkhead box protein C2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.752 64.84 2 1.8858E-07 74080 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 113.47 103.52 92307000 0 0 0 4701800 3602900 7265100 8258900 4693300 5066700 9284600 8307100 11641000 8727900 7700900 13057000 45774 4073 41035 384055;384056;384057;384058;384059;384060;384061;384062;384063;384064;384065;384066 302923;302924;302925;302926;302927;302928;302929;302930;302931;302932;302933;302934;302935 302926 13 SEAAVPPWVDTNDEETIQQQILALSADK Unmodified 3067.4986 0.4985894 3732 Q96A49 SYAP1 Synapse-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 98.145 93.488 3 5.8715E-67 116074 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.17 118.14 230130000 20689000 206020000 3427100 0 0 0 0 0 0 0 0 0 0 0 0 45775 3732 41036 384067;384068;384069;384070 302936;302937;302938;302939;302940 302937 5 SEADVAQQFQYAVR Unmodified 1610.7689 0.76888444 3787 Q96CW5 TUBGCP3 Gamma-tubulin complex component 3 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 70.68 70.798 2 1.4107E-11 81336 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 99.568 78.78 28784000 0 0 0 0 0 8502800 0 0 0 10517000 9764200 0 0 0 0 45776 3787 41037 384071;384072;384073;384074;384075;384076 302941;302942;302943;302944 302943 4 SEAEFRDYPPVLR Unmodified 1577.7838 0.78380622 3038 Q7KZ85 SUPT6H Transcription elongation factor SPT6 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 65.315 65.663 3 0.022534 74395 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.248 27.712 6903800 0 0 0 0 0 0 0 0 0 0 0 0 2885500 0 4018200 45777 3038 41038 384077;384078 302945 302945 1 SEAGAGPGPK Unmodified 869.4243 0.42429566 4299 Q9GZP8 IMUP Immortalization up-regulated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.0719 6.1893 2 0.0061526 3400 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.073 35.404 25834000 0 0 0 1906900 1833800 2104500 4327100 3553600 2689800 1179900 1872600 1175900 1485300 670930 3033200 45778 4299 41039 384079;384080;384081;384082;384083;384084;384085;384086;384087;384088;384089;384090 302946;302947;302948;302949;302950;302951;302952;302953;302954 302948 9 SEAGEATTTTTTTLPQAPTEAAAAAPQDPAPK Acetyl (Protein N-term) 3136.5048 0.50479699 1044 P16989 YBX3 Y-box-binding protein 3 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.31 2.4 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 74.695 74.758 3 1.0191E-47 85849 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.719 77.749 2075600000 0 0 0 93771000 194810000 122470000 142810000 115810000 108380000 203670000 200870000 267960000 202790000 215640000 206610000 45779 1044 41040 384091;384092;384093;384094;384095;384096;384097;384098;384099;384100;384101;384102;384103 302955;302956;302957;302958;302959;302960;302961;302962;302963;302964;302965;302966;302967;302968 302958 14 SEAGHASSPDSEVTSLCQK Unmodified 1988.8745 0.87454807 2912 Q6NZY4 ZCCHC8 Zinc finger CCHC domain-containing protein 8 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 41.667 36.751 3 9.5679E-05 45579 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 61.815 57.106 52269000 0 52269000 0 0 0 0 0 0 0 0 0 0 0 0 0 45780 2912 41041 384104;384105 302969;302970 302970 2 SEAGHLLLQK Unmodified 1094.6084 0.60840804 202 O14686 KMT2D Histone-lysine N-methyltransferase 2D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 35.665 35.912 2 0.0052017 39086 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 69.905 25.138 47283000 0 0 0 0 2482500 3247700 2942100 3727500 3413800 0 4577700 8467300 5342100 4565800 8517000 45781 202 41042 384106;384107;384108;384109;384110;384111;384112;384113;384114;384115 302971;302972;302973;302974 302973 4 SEAGIISK Unmodified 803.43888 0.43888309 128 O00203 AP3B1 AP-3 complex subunit beta-1 yes yes 0 0 0 By MS/MS By MS/MS 2.2 0.4 4 1 3 2 20.59 18.514 2 0.021679 24618 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.368 33.47 342470000 0 336840000 5625300 0 0 0 0 0 0 0 0 0 0 0 0 45782 128 41043 384116;384117;384118;384119;384120 302975;302976 302975 2 SEAGLAGAPAR Unmodified 998.51451 0.51450765 3628 Q92572 AP3S1 AP-3 complex subunit sigma-1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 23.788 23.547 2 0.000593 24983 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 80.165 54.429 12032000 0 0 0 7029400 5002500 0 0 0 0 0 0 0 0 0 0 45783 3628 41044 384121;384122 302977;302978 302978 2 SEAIQTSHFQGR Unmodified 1359.6531 0.6531264 2823 Q5VW36 FOCAD Focadhesin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 25.791 25.993 3 3.4635E-05 27533 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 80.245 55.953 276610000 0 0 0 24833000 21458000 29958000 24062000 19110000 19844000 31467000 30984000 34892000 15473000 10762000 13764000 45784 2823 41045 384123;384124;384125;384126;384127;384128;384129;384130;384131;384132;384133;384134 302979;302980;302981;302982;302983;302984;302985;302986;302987;302988 302983 6 SEAITSVDDAIRK Unmodified 1403.7256 0.72562264 4423 Q9H6S3 EPS8L2 Epidermal growth factor receptor kinase substrate 8-like protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 4 1 1 1 1 1 1 1 1 1 1 1 1 1 48.444 47.073 2;3 1.8858E-06 61598 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.73 89.776 812960000 0 511570000 7861900 15090000 12524000 30892000 19220000 13772000 15351000 33242000 34795000 27059000 20967000 26264000 44346000 45785 4423 41046 384135;384136;384137;384138;384139;384140;384141;384142;384143;384144;384145;384146;384147;384148;384149;384150;384151 302989;302990;302991;302992;302993;302994;302995;302996;302997;302998;302999;303000;303001;303002;303003;303004 302992 14 SEALGVGDVK Unmodified 973.50803 0.50802529 4880 Q9UGI8 TES Testin yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 37.831 37.064 2 0.0026012 40059 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 81.972 54.834 717200000 42578000 490370000 0 10493000 6599800 11419000 10936000 9853900 6501400 13114000 24299000 28145000 0 16240000 46653000 45786 4880 41047 384152;384153;384154;384155;384156;384157;384158;384159;384160;384161;384162;384163;384164 303005;303006;303007;303008;303009;303010;303011;303012;303013 303011 8 SEALLSTLTSDASK Unmodified 1421.725 0.72495394 4732 Q9NXR8 ING3 Inhibitor of growth protein 3 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 76.612 75.219 2 2.5079E-29 93528 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 177.57 162.42 175820000 0 146080000 1356400 0 0 0 0 6809000 0 12377000 0 0 9197400 0 0 45787 4732 41048 384165;384166;384167;384168;384169;384170;384171;384172;384173;384174;384175;384176 303014;303015;303016;303017;303018;303019;303020;303021;303022;303023;303024 303017 11 SEALPTDLPAPSAPDLTEPK Unmodified 2048.0314 0.031366293 996 P14314 PRKCSH Glucosidase 2 subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 80.43 80.497 2 8.9657E-28 93249 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 125.47 102.44 81846000 0 0 0 2989400 0 4952200 4604600 0 0 0 14795000 13383000 4577600 10458000 26086000 45788 996 41049 384177;384178;384179;384180;384181;384182;384183;384184 303025;303026;303027;303028;303029;303030;303031 303030 7 SEALSSVLDQEEAMEIK Oxidation (M) 1893.8877 0.88773852 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 76.945 77.051 2 0.0030044 89266 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 53.448 37.558 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45789 2203 41050 384185;384186 303032;303033 303033 3583 2 SEALVLR Unmodified 786.45995 0.45995289 530 O75665 OFD1 Oral-facial-digital syndrome 1 protein yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 39.452 39.572 2 0.03857 44703 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 69.432 19.313 14243000 0 0 0 0 3013400 0 0 0 0 4438200 3174800 0 3616500 0 0 45790 530 41051 384187;384188;384189;384190 303034 303034 1 SEANATQLLR Unmodified 1101.5778 0.57783619 3489 Q8TCG1 KIAA1524 Protein CIP2A yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 43.555 43.663 2 0.0035551 49020 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 76.064 53.022 27330000 0 0 0 1004300 0 9610400 0 7852500 0 0 0 8863000 0 0 0 45791 3489 41052 384191;384192;384193;384194 303035;303036;303037 303036 3 SEANDAVNSSTK Unmodified 1221.5473 0.54732392 266 O15234 CASC3 Protein CASC3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 7.8712 7.9661 2 0.00099499 5499 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.658 50.862 24138000 0 0 0 1512300 1224900 1454000 2748400 0 3243600 4423000 0 0 2785300 2732600 4013700 45792 266 41053 384195;384196;384197;384198;384199;384200;384201;384202;384203;384204;384205 303038;303039;303040;303041;303042;303043;303044;303045 303039 8 SEAPAEVTHFSPK Unmodified 1398.6779 0.67794416 2953 Q6PID6 TTC33 Tetratricopeptide repeat protein 33 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.35 3.88 6 2 9 1 5 2 1 1 1 1 1 1 1 1 1 44.536 42.456 2;3 0.0016615 52754 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 66.004 66.004 191900000 8783800 122870000 11212000 2961100 0 4009200 3301800 3691000 3181800 7409500 8652400 11366000 4464300 0 0 45793 2953 41054 384206;384207;384208;384209;384210;384211;384212;384213;384214;384215;384216;384217;384218;384219;384220;384221;384222 303046;303047;303048;303049;303050;303051;303052;303053;303054;303055 303048 9 SEAPESVVVDYNNR Unmodified 1577.7322 0.73216458 3801 Q96DT7 ZBTB10 Zinc finger and BTB domain-containing protein 10 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 53.176 53.017 2 0.0039209 60762 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 57.836 53.819 4839200 0 0 0 0 2597500 0 0 0 0 0 0 0 0 2241700 0 45794 3801 41055 384223;384224 303056 303056 1 SEAPESVVVDYNNRKPVNR Unmodified 2172.0923 0.092343841 3801 Q96DT7 ZBTB10 Zinc finger and BTB domain-containing protein 10 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 45.992 46.22 4 0.0027768 50906 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.017 25.889 61609000 0 0 0 0 3715200 5879000 5562900 0 0 9005300 0 10280000 9918600 7845600 9401800 45795 3801 41056 384225;384226;384227;384228;384229;384230;384231;384232 303057;303058;303059;303060;303061;303062;303063 303059 4 SEAPETPMEEEAELVLTEK Unmodified 2130.9878 0.9878465 2739 Q5JTH9 RRP12 RRP12-like protein yes yes 0 0 0 By MS/MS 2.5 0.5 2 2 4 92.073 88.01 2;3 5.4893E-15 109381 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.35 86.288 43567000 0 43567000 0 0 0 0 0 0 0 0 0 0 0 0 0 45796 2739 41057 384233;384234;384235;384236 303064;303065 303064 2 SEAPETPMEEEAELVLTEK Oxidation (M) 2146.9828 0.98276112 2739 Q5JTH9 RRP12 RRP12-like protein yes yes 0 1 0 By MS/MS 10 0 1 1 77.246 77.433 2 0.00072215 89539 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 49.929 47.295 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45797 2739 41057 384237 303066 303066 4381 1 SEAPNSSEEDSPIK Unmodified 1488.658 0.65799658 3283 Q8IYH5 ZZZ3 ZZ-type zinc finger-containing protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.259 28.454 2 3.3533E-14 30306 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 116.55 110.01 43126000 0 0 0 2931600 3254100 3197500 2327200 2356800 2632500 4223400 5555900 7035000 3980000 2852200 2779400 45798 3283 41058 384238;384239;384240;384241;384242;384243;384244;384245;384246;384247;384248;384249 303067;303068;303069;303070;303071;303072;303073;303074;303075 303073 9 SEAPNWATQDSGFY Unmodified 1571.6529 0.65285163 1809 P60228 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.335 78.393 2 0.029303 90884 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 32.218 25.685 165000000 0 0 0 5578000 7756200 12946000 7365900 9829400 7088300 12976000 22545000 18386000 12009000 18344000 30172000 45799 1809 41059 384250;384251;384252;384253;384254;384255;384256;384257;384258;384259;384260;384261 303076;303077 303077 2 SEAPSYIAVPDPSVLK Unmodified 1671.872 0.87195252 5073 Q9UQR0 SCML2 Sex comb on midleg-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 81.804 81.455 2 4.5955E-05 94068 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.959 84.272 82249000 0 15800000 0 3733700 4379600 4943900 5788100 6928900 6076800 7004700 7519200 0 5587900 6540100 7946700 45800 5073 41060 384262;384263;384264;384265;384266;384267;384268;384269;384270;384271;384272;384273 303078;303079;303080;303081;303082;303083;303084;303085;303086;303087;303088;303089;303090;303091;303092 303082 15 SEAQLQEIR Unmodified 1072.5513 0.55128709 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 34.148 34.204 2 0.003237 38092 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 90.709 34.162 98039000 0 0 0 11957000 12216000 9953400 13094000 0 0 14530000 0 24986000 11302000 0 0 45801 1364 41061 384274;384275;384276;384277;384278;384279;384280;384281 303093;303094;303095;303096;303097;303098;303099;303100;303101;303102 303101 10 SEAQLQEIRR Unmodified 1228.6524 0.65239812 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 27.289 27.51 3 0.00048411 28466 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 78.655 48.043 392230000 0 0 0 27561000 32320000 18718000 0 47132000 0 27390000 40102000 48610000 41573000 56905000 51917000 45802 1364 41062 384282;384283;384284;384285;384286;384287;384288;384289;384290;384291 303103;303104;303105;303106;303107;303108 303105 4 SEAQVLNPEHK Unmodified 1250.6255 0.62551466 4992 Q9ULD2 MTUS1 Microtubule-associated tumor suppressor 1 yes yes 0 0 0 By MS/MS 2 0 1 1 28.099 23.794 2 0.038184 31273 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 50.194 23.064 5507600 0 5507600 0 0 0 0 0 0 0 0 0 0 0 0 0 45803 4992 41063 384292 303109 303109 1 SEASLHPVLMSEAPWNTR Oxidation (M) 2039.9735 0.97347426 716 O96019 ACTL6A Actin-like protein 6A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 71.272 71.38 3 4.186E-30 82040 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 113.33 99.703 76396000 0 0 0 0 0 25782000 0 19181000 0 0 0 0 14096000 17338000 0 45804 716 41064 384293;384294;384295;384296 303110;303111;303112;303113 303110 858 4 SEASLHPVLMSEAPWNTR Unmodified 2023.9786 0.97855964 716 O96019 ACTL6A Actin-like protein 6A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 79.714 78.671 3 3.2318E-15 90741 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.094 85.514 112760000 25840000 0 0 0 0 9316600 0 7290600 0 0 6147500 0 5042000 9596900 49522000 45805 716 41064 384297;384298;384299;384300;384301;384302;384303 303114;303115;303116;303117;303118;303119;303120 303114 7 SEASLHPVLMSEAPWNTRAK Oxidation (M) 2239.1056 0.10555106 716 O96019 ACTL6A Actin-like protein 6A yes yes 0 1 1 By MS/MS 2 0 1 1 74.75 66.619 4 6.6538E-05 88049 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.989 52.32 31942000 31942000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45806 716 41065 384304 303121 303121 858 1 SEASSEFAK Unmodified 954.42944 0.42944062 3642 Q92620 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 15.142 14.879 2 0.0073637 17610 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.143 46.149 108880000 0 90922000 0 0 1019900 1375800 2125500 2033700 1615900 2288600 4343600 0 0 3151000 0 45807 3642 41066 384305;384306;384307;384308;384309;384310;384311;384312;384313 303122;303123;303124 303123 3 SEAVRQDEQQRK Unmodified 1472.7332 0.73316763 4817 Q9P2E9 RRBP1 Ribosome-binding protein 1 yes yes 0 0 2 By MS/MS 2 0 1 1 5.6581 3.453 3 1.1513E-09 5102 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 104.41 79.088 38566000 0 0 38566000 0 0 0 0 0 0 0 0 0 0 0 0 45808 4817 41067 384314 303125 303125 1 SEAVVEYVFSGSR Unmodified 1428.6885 0.68850885 3039 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 77.31 77.46 2 0.00058284 89538 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 90.685 73.465 19311000 0 0 0 0 0 4573400 0 0 0 0 0 5308500 0 0 9429500 45809 3039 41068 384315;384316;384317;384318;384319 303126;303127;303128;303129;303130 303126 5 SEAYFRVESGALGPEENFLSLDDILMSHEK Acetyl (Protein N-term);Oxidation (M) 3440.6082 0.6082162 4120 Q9BRX5 GINS3 DNA replication complex GINS protein PSF3 yes yes 1 1 1 By MS/MS 2 0 1 1 99.408 91.278 3 6.539E-45 117675 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.002 81.86 15097000 15097000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45810 4120 41069 384320 303131;303132 303131 5608 2 SECINQNPAASSNHWQIPELAR Unmodified 2521.1768 0.17681853 1331 P33981 TTK Dual specificity protein kinase TTK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 76.786 76.905 3 6.3232E-05 88324 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 45.413 37.421 92168000 0 0 0 0 3381100 0 4408200 9913600 8063500 8940400 8264600 10550000 6299900 9342100 23005000 45811 1331 41070 384321;384322;384323;384324;384325;384326;384327;384328;384329;384330 303133;303134;303135;303136;303137 303133 5 SECLNNIGDSSPLIR Unmodified 1673.8043 0.80428367 3692 Q92973 TNPO1 Transportin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.734 69.809 2 1.0086E-30 79994 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 147.24 137.59 184170000 0 0 0 6945300 6507200 17616000 6847000 8995900 9083500 13797000 18478000 28953000 18639000 20797000 27514000 45812 3692 41071 384331;384332;384333;384334;384335;384336;384337;384338;384339;384340;384341;384342 303138;303139;303140;303141;303142;303143;303144;303145;303146;303147;303148;303149;303150 303148 13 SECRDLVVPGSK Unmodified 1345.666 0.66599927 1331 P33981 TTK Dual specificity protein kinase TTK yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.493 33.677 3 0.008372 35690 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.657 24.124 132990000 0 0 0 8264400 7893800 8882600 9981100 11399000 9535300 10410000 15571000 13198000 12615000 13020000 12225000 45813 1331 41072 384343;384344;384345;384346;384347;384348;384349;384350;384351;384352;384353;384354 303151;303152;303153;303154;303155 303152 3 SECSSDFGGK Unmodified 1072.4131 0.41313863 2463 Q14C86 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 11.566 11.801 2 0.040098 10960 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 40.021 22.636 2410900 0 0 0 0 0 0 1384800 0 0 0 1026100 0 0 0 0 45814 2463 41073 384355;384356 303156 303156 1 SECTEEAEEGPAK Unmodified 1435.5773 0.57730342 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.836 13.999 2 8.8637E-13 12939 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 157.24 157.01 146510000 0 0 0 7392500 13406000 8346400 9363200 8329100 6653000 14739000 14526000 14851000 16130000 12931000 19841000 45815 5262 41074 384357;384358;384359;384360;384361;384362;384363;384364;384365;384366;384367;384368 303157;303158;303159;303160;303161;303162;303163;303164;303165;303166;303167;303168 303162 12 SEDAEVLDATPSGIMK Unmodified 1661.7818 0.78181689 2734 Q5JSH3 WDR44 WD repeat-containing protein 44 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 8.36 3.15 2 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 72.931 71.784 2 1.1994E-56 88541 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 168.02 152.13 300940000 13709000 211100000 0 0 0 3843900 3914500 5903100 3107500 6237200 8861900 9719600 4464200 7461200 22619000 45816 2734 41075 384369;384370;384371;384372;384373;384374;384375;384376;384377;384378;384379;384380;384381;384382 303169;303170;303171;303172;303173;303174;303175;303176;303177;303178;303179;303180 303172 11 SEDAEVLDATPSGIMK Oxidation (M) 1677.7767 0.77673151 2734 Q5JSH3 WDR44 WD repeat-containing protein 44 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.58 1 2 2 12 3 2 1 1 1 1 1 1 1 1 1 1 1 1 59.902 58.379 2 2.3581E-38 72983 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 135.5 113.7 184060000 14670000 107740000 0 3115000 2908400 0 3953300 3355800 2183100 3389300 9895600 9578300 5238800 5309500 12722000 45817 2734 41075 384383;384384;384385;384386;384387;384388;384389;384390;384391;384392;384393;384394;384395;384396;384397;384398;384399 303181;303182;303183;303184;303185;303186;303187;303188;303189;303190;303191;303192;303193;303194;303195;303196 303185 4377 16 SEDALGLTITDNGAGYAFIK Unmodified 2055.0161 0.01605058 226 O14908 GIPC1 PDZ domain-containing protein GIPC1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 91.963 87.254 2 3.9531E-29 110317 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 148.68 140.38 12373000 10900000 0 1472400 0 0 0 0 0 0 0 0 0 0 0 0 45818 226 41076 384400;384401;384402 303197;303198;303199 303198 3 SEDASCFSAK Unmodified 1100.4444 0.44443876 5000 Q9ULM3 YEATS2 YEATS domain-containing protein 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 19.869 20.108 2 0.01238 20623 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 52.579 35.803 17485000 0 0 0 0 3167000 2213300 0 0 0 1831400 2520700 3910900 1666800 2175300 0 45819 5000 41077 384403;384404;384405;384406;384407;384408;384409 303200;303201 303200 2 SEDCFILDHGK Unmodified 1319.5816 0.58160094 819 P06396;CON__Q3SX14 GSN Gelsolin yes no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 46.945 47.123 2 0.006196 53002 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 52.725 42.944 + 47478000 0 0 0 9849000 3178400 0 4823700 0 2020800 0 4137200 7603800 6139300 3983900 5742000 45820 819 41078 384410;384411;384412;384413;384414;384415;384416;384417;384418;384419 303202;303203;303204;303205;303206;303207;303208 303204 6 SEDCRESEIETNTELK Unmodified 1938.8477 0.84766462 2818 Q5VUA4 ZNF318 Zinc finger protein 318 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 37.16 37.29 3 0.012427 41288 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 32.191 26.028 46539000 0 0 0 3920700 2815300 4297900 2728100 5058300 2908600 5702900 5020700 5036500 4901200 4148900 0 45821 2818 41079 384420;384421;384422;384423;384424;384425;384426;384427;384428;384429;384430 303209;303210;303211 303210 3 SEDDESGAGELTR Unmodified 1364.5692 0.56918158 1334 P33993 MCM7 DNA replication licensing factor MCM7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 22.805 23.135 2 3.6576E-09 23345 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 113.47 95.248 18411000 0 0 0 0 0 1814700 1638200 0 0 0 0 3625000 4167300 0 7166100 45822 1334 41080 384431;384432;384433;384434;384435 303212;303213;303214;303215 303214 4 SEDDESGAGELTREELR Unmodified 1891.8395 0.83954278 1334 P33993 MCM7 DNA replication licensing factor MCM7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.671 45.84 3 1.7814E-28 51542 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 113.69 109.96 500390000 0 0 0 16947000 15761000 66777000 22161000 21483000 24026000 43655000 61181000 43945000 34636000 63559000 86261000 45823 1334 41081 384436;384437;384438;384439;384440;384441;384442;384443;384444;384445;384446;384447 303216;303217;303218;303219;303220;303221;303222;303223;303224;303225;303226;303227;303228 303216 13 SEDDESGAGELTREELRQIAEEDFYEK Unmodified 3144.4007 0.40072585 1334 P33993 MCM7 DNA replication licensing factor MCM7 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 87.399 82.954 3;4 4.856E-06 104723 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.659 37.771 229370000 171580000 55051000 2744600 0 0 0 0 0 0 0 0 0 0 0 0 45824 1334 41082 384448;384449;384450;384451;384452 303229;303230;303231 303231 3 SEDDSAVPLAK Unmodified 1130.5455 0.54553301 5123 Q9Y2W2 WBP11 WW domain-binding protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33.825 33.172 2 0.00032224 36751 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 95.608 71.453 382860000 11745000 19426000 0 25109000 32819000 25288000 34210000 29876000 23355000 22374000 30750000 37577000 32395000 32188000 25745000 45825 5123 41083 384453;384454;384455;384456;384457;384458;384459;384460;384461;384462;384463;384464;384465;384466 303232;303233;303234;303235;303236;303237;303238;303239;303240;303241;303242;303243;303244;303245 303240 9 SEDEAGCSSVDEESYK Unmodified 1790.6789 0.67886796 3049 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.38 27.577 2 2.1999E-31 29293 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 148.13 148.13 166550000 0 0 0 8213500 11745000 10888000 15115000 12192000 11454000 13707000 18521000 18464000 14014000 15176000 17056000 45826 3049 41084 384467;384468;384469;384470;384471;384472;384473;384474;384475;384476;384477;384478 303246;303247;303248;303249;303250;303251;303252;303253;303254;303255;303256;303257;303258 303256 13 SEDEANRDRVAAK Unmodified 1459.7015 0.70153315 1743 P54652 HSPA2 Heat shock-related 70 kDa protein 2 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 7.5594 4.566 3 0.0067493 6490 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 67.997 32.32 103900000 17560000 9662300 76679000 0 0 0 0 0 0 0 0 0 0 0 0 45827 1743 41085 384479;384480;384481 303259;303260 303260 2 SEDEESLAGQK Unmodified 1191.5255 0.52552585 3830 Q96EZ8 MCRS1 Microspherule protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 17.293 17.371 2 0.0217 17788 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 42.19 29.401 9874200 0 0 0 1082300 933170 1356500 1001800 0 0 1577200 2036600 0 0 1886600 0 45828 3830 41086 384482;384483;384484;384485;384486;384487;384488 303261;303262;303263 303261 3 SEDEPTRSLSGLILK Unmodified 1643.873 0.87301516 3692;215 Q92973;O14787 TNPO1;TNPO2 Transportin-1;Transportin-2 no no 0 0 1 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 2 2 2 79.316 74.354 2;3 0.0045784 93962 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 57.159 45.243 404160000 109460000 125630000 169070000 0 0 0 0 0 0 0 0 0 0 0 0 45829 3692;215 41087 384489;384490;384491;384492;384493;384494 303264;303265;303266;303267;303268;303269;303270 303264 4 SEDFGVNEDLADSDAR Unmodified 1738.7282 0.72820141 773 P04083 ANXA1 Annexin A1 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 60.246 60.667 2 1.482E-10 68511 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.98 103.6 12141000 0 0 0 0 0 0 0 2470500 0 0 0 3508100 0 0 6162500 45830 773 41088 384495;384496;384497 303271;303272 303271 1 SEDGAIHVIER Unmodified 1224.6099 0.6098646 3609 Q92503 SEC14L1 SEC14-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 2 2 2 1 2 2 1 38.002 38.131 2;3 0.0014969 42946 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 67.704 58.791 485910000 0 0 0 25092000 36836000 39310000 37068000 49517000 25101000 41469000 47689000 66869000 44085000 32524000 40346000 45831 3609 41089 384498;384499;384500;384501;384502;384503;384504;384505;384506;384507;384508;384509;384510;384511;384512;384513;384514;384515;384516;384517;384518;384519 303273;303274;303275;303276;303277;303278;303279;303280;303281;303282 303281 6 SEDGAIHVIERR Unmodified 1380.711 0.71097563 3609 Q92503 SEC14L1 SEC14-like protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.438 33.622 3 0.0019915 35734 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.314 69.635 317390000 0 0 0 14868000 15010000 20075000 24402000 29381000 26622000 21420000 30415000 46351000 34869000 17591000 36386000 45832 3609 41090 384520;384521;384522;384523;384524;384525;384526;384527;384528;384529;384530;384531 303283;303284;303285;303286;303287;303288;303289 303284 4 SEDGASLPVMDLTELPK Unmodified 1800.8815 0.88153093 3104 Q7Z569 BRAP BRCA1-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 90.759 89.208 2 2.7875E-57 110233 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 155.08 138.83 132900000 0 127680000 0 0 0 0 0 0 0 0 0 0 0 2016400 3204700 45833 3104 41091 384532;384533;384534 303290;303291;303292 303291 3 SEDGEIVSTPR Unmodified 1188.5622 0.5622457 2184 Q12769 NUP160 Nuclear pore complex protein Nup160 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.768 31.958 2 5.3381E-05 34842 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 114.97 81.706 100480000 0 0 0 0 7517100 10942000 10943000 6787300 7871200 12974000 11724000 12789000 10929000 8006600 0 45834 2184 41092 384535;384536;384537;384538;384539;384540;384541;384542;384543;384544;384545;384546 303293;303294;303295;303296;303297;303298;303299;303300;303301;303302;303303;303304;303305;303306 303294 14 SEDGVEGDLGETQSR Unmodified 1577.6805 0.68052294 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.14 35.321 2 5.6529E-27 37745 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 158.4 141.77 442240000 0 0 0 35635000 20968000 24368000 29942000 35441000 18680000 45586000 37009000 55522000 39860000 28989000 70245000 45835 2172 41093 384547;384548;384549;384550;384551;384552;384553;384554;384555;384556;384557;384558 303307;303308;303309;303310;303311;303312;303313;303314;303315;303316;303317;303318;303319;303320 303310 14 SEDLDNSIDK Unmodified 1134.5041 0.50406212 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 26.078 26.294 2 0.0015513 26667 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.178 77.331 205630000 0 0 0 0 13750000 29787000 19062000 15321000 12322000 22515000 0 26428000 21021000 17348000 28077000 45836 5071 41094 384559;384560;384561;384562;384563;384564;384565;384566;384567;384568 303321;303322;303323;303324;303325;303326;303327;303328;303329 303324 8 SEDLLDYGPFR Unmodified 1310.6143 0.61428128 788 P04843 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 82.811 82.862 2 0.0027105 95852 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 66.435 49.665 6604300 0 0 0 1417600 0 0 847870 1619000 806620 1913100 0 0 0 0 0 45837 788 41095 384569;384570;384571;384572;384573;384574;384575 303330;303331;303332;303333 303330 4 SEDPDQQYLILNTAR Unmodified 1761.8533 0.85334235 3961 Q96QK1 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 73.293 73.385 2 7.1091E-20 84513 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 111.79 95.903 136610000 0 0 0 7375100 0 6594600 7588500 0 0 0 17083000 33946000 11594000 16028000 36401000 45838 3961 41096 384576;384577;384578;384579;384580;384581;384582;384583;384584 303334;303335;303336;303337;303338;303339;303340;303341;303342;303343;303344;303345 303343 12 SEDPDQQYLILNTARK Unmodified 1889.9483 0.94830537 3961 Q96QK1 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 63.688 63.754 3 3.2452E-07 72183 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 84.14 73.859 121380000 0 0 0 7367900 4597100 6549600 7507900 0 0 8517200 17336000 14324000 0 14094000 41083000 45839 3961 41097 384585;384586;384587;384588;384589;384590;384591;384592;384593 303346;303347;303348;303349;303350;303351;303352;303353;303354;303355 303351 10 SEDPLFVLEHSLPIDTQYYLEQQLAK Unmodified 3075.5441 0.54408303 1234 P28340 POLD1 DNA polymerase delta catalytic subunit yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 100.96 96.903 3 4.2415E-38 119977 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.68 104.85 41298000 0 41298000 0 0 0 0 0 0 0 0 0 0 0 0 0 45840 1234 41098 384594;384595 303356 303356 1 SEDPPGQEAGSEEEGSSASGLAK Unmodified 2217.9509 0.95094372 465 O75153 CLUH Clustered mitochondria protein homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.14 3.56 2 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 46.087 46.193 2;3 4.6264E-128 92012 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 186.68 178.18 157940000 44784000 34840000 0 3718300 2377600 7047000 6664800 3569000 0 8055000 10326000 11622000 0 9411900 15529000 45841 465 41099 384596;384597;384598;384599;384600;384601;384602;384603;384604;384605;384606;384607;384608;384609 303357;303358;303359;303360;303361;303362;303363;303364;303365;303366;303367;303368;303369;303370 303362 14 SEDSSGAAGLSGLHR Unmodified 1442.675 0.67498405 3143 Q86U86 PBRM1 Protein polybromo-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.488 33.672 3 0.0018445 36775 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 36.345 23.962 201600000 0 0 0 11386000 12746000 13034000 12894000 13873000 13146000 20607000 21001000 20481000 24128000 17183000 21125000 45842 3143 41100 384610;384611;384612;384613;384614;384615;384616;384617;384618;384619;384620;384621 303371;303372;303373;303374;303375;303376;303377;303378;303379;303380 303372 7 SEDSSGAAGLSGLHRTYSQDCSFK Unmodified 2559.1296 0.12959356 3143 Q86U86 PBRM1 Protein polybromo-1 yes yes 0 0 1 By MS/MS By matching 2 0 2 1 1 59.096 53.049 4 0.0028353 71812 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 36.504 33.406 16506000 13588000 0 2917000 0 0 0 0 0 0 0 0 0 0 0 0 45843 3143 41101 384622;384623 303381;303382 303382 2 SEDSTKDDIDLDALAAEIEGAGAAK Unmodified 2504.1766 0.17658656 437 O60841 EIF5B Eukaryotic translation initiation factor 5B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 2 3 1 94.885 90.447 3 8.4967E-56 113087 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.711 95.605 231050000 88737000 130190000 12117000 0 0 0 0 0 0 0 0 0 0 0 0 45844 437 41102 384624;384625;384626;384627;384628;384629 303383;303384;303385;303386;303387;303388;303389;303390;303391;303392;303393 303383 11 SEDTTGPITGLALTSVNK Unmodified 1802.9262 0.92617294 3615 Q92538 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 78.253 78.311 2 2.2661E-37 90025 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 157.52 138.42 178300000 0 0 0 8472000 8823100 14259000 13140000 12442000 9490100 24253000 21932000 19412000 0 19875000 26202000 45845 3615 41103 384630;384631;384632;384633;384634;384635;384636;384637;384638;384639;384640 303394;303395;303396;303397;303398;303399;303400;303401;303402;303403;303404 303397 11 SEDVPYTAALTAVRPSR Unmodified 1831.9428 0.94282606 2591 Q15904 ATP6AP1 V-type proton ATPase subunit S1 yes yes 0 0 1 By matching By MS/MS By matching By MS/MS By matching 10 0 5 1 1 1 1 1 72.522 72.71 3 0.038823 83821 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 24.784 19.125 19927000 0 0 0 0 0 0 3068600 3021000 2352600 0 0 8662900 0 2821700 0 45846 2591 41104 384641;384642;384643;384644;384645 303405 303405 1 SEDVWLEAAR Unmodified 1174.5619 0.56185177 601 O94906 PRPF6 Pre-mRNA-processing factor 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.622 64.711 2 0.002198 73959 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 85.676 70.014 102520000 0 0 0 4162600 6694100 6608000 6587400 6535400 7378100 9847900 11511000 12628000 9472800 8953400 12139000 45847 601 41105 384646;384647;384648;384649;384650;384651;384652;384653;384654;384655;384656;384657 303406;303407;303408;303409;303410;303411;303412;303413;303414;303415;303416 303407 11 SEDYVDIVQGNR Unmodified 1393.6474 0.64737232 159 O00469 PLOD2 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 58.722 59.12 2 0.00094292 66500 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.496 70.631 10447000 0 0 0 0 0 0 0 0 0 0 0 0 3922700 0 6524000 45848 159 41106 384658;384659 303417;303418 303417 2 SEDYVDIVQGR Unmodified 1279.6044 0.60444487 2081 Q02809 PLOD1 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 60.791 60.994 2 0.0080511 68733 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 52.49 37.339 23724000 0 0 0 0 1541300 0 2158400 0 1296500 0 3023400 4019800 0 2753100 8931500 45849 2081 41107 384660;384661;384662;384663;384664;384665;384666 303419;303420;303421 303420 3 SEDYVELVQRK Unmodified 1364.6936 0.69359423 414 O60568 PLOD3 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 51.373 51.659 3 0.0022731 57336 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.188 32.649 28869000 0 0 0 0 0 0 7040000 0 4174200 0 0 0 0 6309600 11346000 45850 414 41108 384667;384668;384669;384670 303422;303423;303424;303425 303424 4 SEEAHAEDSVMDHHFR Unmodified 1895.7857 0.78567349 3405 Q8NC51 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 2 1 2 2 34.721 35.142 3;4 2.4724E-15 37732 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 102.38 98.344 430580000 0 0 0 0 0 12359000 0 0 14068000 12537000 18876000 74611000 42462000 43660000 212010000 45851 3405 41109 384671;384672;384673;384674;384675;384676;384677;384678;384679;384680;384681 303426;303427;303428;303429;303430;303431 303430 6 SEEAHAEDSVMDHHFR Oxidation (M) 1911.7806 0.78058811 3405 Q8NC51 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 2 1 1 24.085 24.505 3;4 0.0005896 25030 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 49.066 38.581 91908000 0 0 0 0 0 4007400 0 0 0 2113000 0 53903000 20644000 0 11241000 45852 3405 41109 384682;384683;384684;384685;384686;384687 303432;303433 303433 4962 1 SEEDLFLQVYEDLIQELAK Unmodified 2281.1366 0.13655965 4705 Q9NWW6 NMRK1 Nicotinamide riboside kinase 1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 106.14 99.496 2;3 2.1448E-40 125971 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 130.2 121.6 19552000 17713000 1838800 0 0 0 0 0 0 0 0 0 0 0 0 0 45853 4705 41110 384688;384689;384690 303434;303435;303436;303437 303435 4 SEEDNEIESEEEVQPK Unmodified 1889.8014 0.80142594 1694 P52701 MSH6 DNA mismatch repair protein Msh6 yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 40.772 40.933 2 0.00095725 45501 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 55.98 47.57 28260000 0 0 0 2102100 1874800 2886200 0 0 2590900 4036400 4988500 4018400 0 0 5762200 45854 1694 41111 384691;384692;384693;384694;384695;384696;384697;384698;384699;384700 303438;303439;303440;303441 303440 4 SEEEFIHINNK Unmodified 1358.6466 0.64664404 2485 Q15046 KARS Lysine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 6.12 3.89 6 2 8 2 4 2 1 2 2 1 1 1 50.137 47.481 2;3 5.626E-07 62353 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 156.46 123.19 769660000 75141000 427080000 98142000 0 0 0 2910300 14359000 0 0 38612000 37531000 0 6318200 69565000 45855 2485 41112 384701;384702;384703;384704;384705;384706;384707;384708;384709;384710;384711;384712;384713;384714;384715;384716 303442;303443;303444;303445;303446;303447;303448;303449;303450;303451;303452 303443 4 SEEEIDFLR Unmodified 1136.535 0.53496832 5084 Q9Y262 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.845 69.922 2 0.0046593 80571 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 119.27 67.42 63258000 0 0 0 3689800 2390900 5276700 2834900 3226600 4428600 5767000 6591700 9401800 4690500 5641300 9318400 45856 5084 41113 384717;384718;384719;384720;384721;384722;384723;384724;384725;384726;384727;384728 303453;303454;303455;303456;303457;303458;303459;303460;303461 303453 9 SEEEIDFLRSNPK Unmodified 1562.7577 0.75765105 5084 Q9Y262 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.67 0.471 1 2 1 1 1 65.485 60.958 3 0.0033086 75285 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 63.76 38.439 13706000 1882800 6824200 4999300 0 0 0 0 0 0 0 0 0 0 0 0 45857 5084 41114 384729;384730;384731 303462;303463 303463 2 SEEELEASK Unmodified 1020.4611 0.46113468 3065 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 yes yes 0 0 0 By matching By MS/MS By matching 10 0 3 1 1 1 13.445 13.682 2 0.013737 12626 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 59.35 32.748 9004700 0 0 0 0 1670300 0 0 0 0 0 4016800 3317600 0 0 0 45858 3065 41115 384732;384733;384734 303464 303464 1 SEEELEDYMVEIDILASCDHPNIVK Unmodified 2947.3467 0.34670513 4365 Q9H2G2 SLK STE20-like serine/threonine-protein kinase yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 98.549 92.728 3 6.8878E-108 117171 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 152.27 142.81 67184000 67184000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45859 4365 41116 384735;384736;384737 303465;303466;303467 303467 3 SEEELEDYMVEIDILASCDHPNIVK Oxidation (M) 2963.3416 0.34161975 4365 Q9H2G2 SLK STE20-like serine/threonine-protein kinase yes yes 0 1 0 By MS/MS 2 0 1 1 96.04 87.91 3 2.5529E-79 113612 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 139.69 134.16 18133000 18133000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45860 4365 41116 384738 303468 303468 5825 1 SEEENVVLK Unmodified 1045.5292 0.52915466 4345 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 35.845 30.253 2 0.032444 39417 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.252 34.64 21700000 5287700 16412000 0 0 0 0 0 0 0 0 0 0 0 0 0 45861 4345 41117 384739;384740 303469 303469 1 SEEEQSSSSVK Unmodified 1195.5204 0.52044047 851 P07910 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.5 3.72 1 3 1 11 2 2 1 1 1 1 1 1 1 1 1 1 1 1 12.584 12.425 2 4.4755E-10 92556 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 174.41 143.12 275950000 200550000 28675000 5011900 2400800 2999800 7274200 5192900 2868900 6980500 0 1897300 2438600 2889700 2172000 4599900 45862 851 41118 384741;384742;384743;384744;384745;384746;384747;384748;384749;384750;384751;384752;384753;384754;384755;384756 303470;303471;303472;303473;303474;303475;303476;303477;303478;303479;303480;303481;303482 303475 13 SEEEQSSSSVKK Unmodified 1323.6154 0.61540349 851 P07910 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 5.7068 2.406 3 0.025114 3805 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 28.361 20.046 30196000 0 30196000 0 0 0 0 0 0 0 0 0 0 0 0 0 45863 851 41119 384757;384758 303483 303483 1 SEEERLSIQNFSK Unmodified 1565.7686 0.76855009 820 P06400 RB1 Retinoblastoma-associated protein yes yes 0 0 1 By MS/MS 2 0 1 1 58.463 54.66 3 0.033396 68105 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 36.944 23.228 5313800 0 0 5313800 0 0 0 0 0 0 0 0 0 0 0 0 45864 820 41120 384759 303484 303484 1 SEEERVTETQK Unmodified 1334.6314 0.6313879 1345 P35241 RDX Radixin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 1 2 2 2 2 2 2 2 2 2 8.297 8.4324 2;3 0.00062269 5826 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 62.338 34.011 313040000 0 0 0 6538000 4922400 3295700 5955800 4114100 4110300 7097900 91302000 41215000 10774000 37518000 96198000 45865 1345 41121 384760;384761;384762;384763;384764;384765;384766;384767;384768;384769;384770;384771;384772;384773;384774;384775;384776;384777;384778;384779;384780;384781;384782 303485;303486 303486 2 SEEFSDLPCPVEEIK Unmodified 1777.808 0.80803164 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 80.771 79.45 2 1.4987E-30 92456 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 145.23 117.9 452590000 13115000 324260000 0 6293800 12037000 0 8934600 12028000 10790000 16962000 0 23232000 10777000 14163000 0 45866 3443 41122 384783;384784;384785;384786;384787;384788;384789;384790;384791;384792;384793;384794;384795;384796;384797 303487;303488;303489;303490;303491;303492;303493;303494;303495;303496;303497;303498;303499;303500;303501;303502;303503;303504 303488 18 SEEGCIPNIAPDICIAYK Unmodified 2048.9547 0.95471265 4837 Q9UBD5 ORC3 Origin recognition complex subunit 3 yes yes 0 0 0 By MS/MS 2 0 1 1 89.577 84.704 2 0.00010018 105200 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.279 67.841 66363000 0 66363000 0 0 0 0 0 0 0 0 0 0 0 0 0 45867 4837 41123 384798 303505 303505 1 SEEGHPFK Unmodified 929.4243 0.42429566 626 O95197 RTN3 Reticulon-3 yes yes 0 0 0 By matching By MS/MS By MS/MS 2 0 3 1 1 1 10.177 7.0499 2 0.012175 9372 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.45 20.204 43064000 4931600 30406000 7726600 0 0 0 0 0 0 0 0 0 0 0 0 45868 626 41124 384799;384800;384801 303506 303506 1 SEEGNVSAPGPESK Unmodified 1386.6263 0.62630252 2091 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 21.07 21.557 2 0.0039209 21423 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.836 50.456 14119000 0 0 0 0 0 0 0 0 0 0 0 4675000 2951000 2647000 3845800 45869 2091 41125 384802;384803;384804;384805 303507;303508;303509 303507 3 SEEHCIVTEDGNQHVYK Unmodified 2043.8956 0.89561787 3534 Q8WU10 PYROXD1 Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 35.052 31.709 3 0.0036013 39993 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 43.791 41.647 5331600 0 0 5331600 0 0 0 0 0 0 0 0 0 0 0 0 45870 3534 41126 384806 303510 303510 1 SEEHHLYSNPIK Unmodified 1452.6997 0.69974224 244 O15042 U2SURP U2 snRNP-associated SURP motif-containing protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9 2.65 1 7 1 1 1 1 1 1 1 1 29.953 29.48 3 0.00054589 30867 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.157 40.763 117140000 35533000 0 0 0 0 0 3543200 5817100 0 0 14149000 12752000 17200000 6976100 21171000 45871 244 41127 384807;384808;384809;384810;384811;384812;384813;384814 303511;303512;303513;303514 303514 3 SEEIITPVYCTGVSAQVQK Acetyl (Protein N-term) 2150.0565 0.056535186 841 P07384 CAPN1 Calpain-1 catalytic subunit yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.5 2.06 1 17 1 2 2 2 2 2 1 2 1 1 1 1 84.306 84.692 2;3 6.134E-13 96036 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 102.66 89.783 157830000 9249700 0 0 0 13941000 7891500 9780300 8877600 9595800 17143000 31408000 13135000 6763600 10540000 19505000 45872 841 41128 384815;384816;384817;384818;384819;384820;384821;384822;384823;384824;384825;384826;384827;384828;384829;384830;384831;384832 303515;303516;303517;303518;303519;303520;303521;303522;303523;303524;303525;303526;303527;303528 303520 13 SEEIPKPSK Unmodified 1013.5393 0.53932542 172 O00625 PIR Pirin yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 21.366 17.246 2 0.0027555 21471 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 124.98 104.46 291110000 5285800 285820000 0 0 0 0 0 0 0 0 0 0 0 0 0 45873 172 41129 384833;384834;384835 303529;303530;303531;303532;303533 303530 4 SEEIQVIK Unmodified 944.51786 0.51786169 16 A3KMH1 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 0 0 0 By matching By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 40.001 40.322 2 0.0088146 44291 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 84.916 46.109 35303000 0 0 0 0 0 0 4783400 5164200 0 5452600 7437600 12465000 0 0 0 45874 16 41130 384836;384837;384838;384839;384840 303534 303534 1 SEEISESESEETNAPK Unmodified 1764.7537 0.75374746 1736 P54259 ATN1 Atrophin-1 yes yes 0 0 0 By MS/MS 10 0 1 1 27.798 28.495 2 0.0033697 30210 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.019 42.143 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45875 1736 41131 384841 303535 303535 1 SEEISESESEETNAPKK Unmodified 1892.8487 0.84871048 1736 P54259 ATN1 Atrophin-1 yes yes 0 0 1 By matching By MS/MS By matching By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 21.185 21.452 3 0.00010835 21363 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.547 40.067 19038000 0 0 0 0 0 1860400 3248900 0 0 3020300 3523000 0 0 3879300 3506600 45876 1736 41132 384842;384843;384844;384845;384846;384847 303536;303537;303538 303537 3 SEELNVEPGLGR Unmodified 1298.6466 0.64664404 1088 P19419 ELK1 ETS domain-containing protein Elk-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 53.883 54.123 2 6.7034E-05 61620 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 112.71 86.606 108700000 0 0 0 0 0 12013000 0 16543000 11732000 17119000 0 19778000 17419000 14095000 0 45877 1088 41133 384848;384849;384850;384851;384852;384853;384854 303539;303540;303541;303542;303543;303544 303542 1 SEEMTLQINELQK Oxidation (M) 1577.7607 0.76068752 4077 Q99996 AKAP9 A-kinase anchor protein 9 yes yes 0 1 0 By MS/MS 2 0 1 1 63.997 58.089 2 0.0040002 74508 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.387 52.746 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45878 4077 41134 384855 303545 303545 5583 1 SEEMTLQINELQK Unmodified 1561.7658 0.76577289 4077 Q99996 AKAP9 A-kinase anchor protein 9 yes yes 0 0 0 By MS/MS 2 0 1 1 76.574 71.737 2 0.028999 89646 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.848 53.241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45879 4077 41134 384856 303546 303546 1 SEENEEPMETDQNAK Oxidation (M) 1765.6949 0.69485237 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.8 4.21 2 3 5 2 2 1 1 1 1 1 1 22.94 22.57 2 1.5084E-262 99343 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 252.21 242.32 131840000 94386000 11704000 1303700 0 0 0 1432000 0 0 1480600 0 0 1476700 4248200 15813000 45880 1337 41135 384857;384858;384859;384860;384861;384862;384863;384864;384865;384866 303547;303548;303549;303550;303551 303551 2020 5 SEENEEPMETDQNAK Unmodified 1749.6999 0.69993775 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.7 4.31 3 2 5 3 2 1 1 1 1 1 39.999 40.445 2;3 0 99568 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 308.55 285.53 192780000 75788000 12495000 0 0 0 0 0 0 0 3247900 20110000 15324000 0 14789000 51026000 45881 1337 41135 384867;384868;384869;384870;384871;384872;384873;384874;384875;384876 303552;303553;303554;303555;303556;303557;303558;303559;303560 303558 8 SEENEEPMETDQNAKEEEK Oxidation (M) 2280.9176 0.91759468 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 6 4 3 3 1 1 1 1 1 1 14.749 13.229 3 7.6197E-41 17498 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 130.77 130.66 67802000 22465000 29256000 1645600 0 0 0 1376200 0 0 0 0 0 1620800 0 11438000 45882 1337 41136 384877;384878;384879;384880;384881;384882 303561;303562;303563;303564 303564 2020 4 SEENEEPMETDQNAKEEEK Unmodified 2264.9227 0.92268006 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.8 3.92 2 3 1 1 1 1 1 22.354 20.807 3 4.3687E-69 26303 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 154.39 152.93 81599000 16401000 22805000 0 0 0 0 0 0 0 0 14467000 0 0 7522500 20402000 45883 1337 41136 384883;384884;384885;384886;384887 303565;303566;303567;303568;303569;303570;303571 303565 7 SEEPAGQILSHLSSELK Unmodified 1823.9265 0.92650729 5066 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.8 3.92 2 3 1 1 1 1 1 87.054 85.679 3 0.0001633 108355 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.707 74.141 102520000 0 75375000 3006300 0 0 0 0 0 0 5110400 3860500 0 0 0 15167000 45884 5066 41137 384888;384889;384890;384891;384892 303572;303573;303574;303575;303576 303574 5 SEEPDSITK Unmodified 1004.4662 0.46622005 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 16.904 17.132 2 0.043215 16894 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 43.734 11.379 73255000 0 0 0 0 0 7025400 7786000 0 6134600 6801900 11168000 0 10374000 10738000 13227000 45885 1601 41138 384893;384894;384895;384896;384897;384898;384899;384900 303577;303578 303578 2 SEERAEVAESR Unmodified 1261.5899 0.58985744 90 CON__Q3SX28 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 8.267 8.4205 3 0.0003396 5889 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 70.622 55.42 + 73257000 0 0 0 0 1710900 1603500 2409000 2180900 1960200 2757300 24535000 6948400 5451800 9862400 13838000 45886 90 41139 384901;384902;384903;384904;384905;384906;384907;384908;384909;384910;384911 303579;303580;303581;303582;303583;303584 303580 4 SEESAAPSRERPK Unmodified 1442.7114 0.71136956 1462 P42684 ABL2 Abelson tyrosine-protein kinase 2 yes yes 0 0 2 By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 6.4716 6.5895 3 0.013424 4772 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 59.57 37.811 23474000 0 0 0 1294100 1080700 0 1914800 1637200 3004900 2398300 4328100 2406100 2710100 2699400 0 45887 1462 41140 384912;384913;384914;384915;384916;384917;384918;384919;384920;384921 303585 303585 0 SEESEATSWFSK Unmodified 1386.5939 0.59393976 327 O43426 SYNJ1 Synaptojanin-1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 68.33 63.668 2 0.00019525 77942 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 96.89 76.586 3449800 0 3449800 0 0 0 0 0 0 0 0 0 0 0 0 0 45888 327 41141 384922;384923 303586;303587 303587 2 SEESSHYSTEK Unmodified 1282.5313 0.53133951 1766 P55265 ADAR Double-stranded RNA-specific adenosine deaminase yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 6.7962 3.4954 2 4.476E-08 5125 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 120.45 78.343 84444000 0 84444000 0 0 0 0 0 0 0 0 0 0 0 0 0 45889 1766 41142 384924;384925 303588 303588 1 SEESSQPEAGAVSR Unmodified 1432.643 0.64301522 4814 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 16.954 17.271 2 0.024772 16237 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.875 22.282 4690100 0 0 0 0 0 0 0 0 845990 0 0 0 1493200 0 2350900 45890 4814 41143 384926;384927;384928 303589 303589 1 SEESVSRLPEEIR Unmodified 1529.7686 0.76855009 2135 Q07065 CKAP4 Cytoskeleton-associated protein 4 yes yes 0 0 1 By MS/MS By MS/MS By matching 10 0 3 1 1 1 50.165 50.306 3 0.0014594 56952 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 59.898 51.987 23940000 0 0 0 0 0 0 10452000 0 0 0 0 0 0 13488000 0 45891 2135 41144 384929;384930;384931 303590;303591 303590 2 SEETLDEGPPK Unmodified 1200.551 0.55101232 2043 Q00688 FKBP3 Peptidyl-prolyl cis-trans isomerase FKBP3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.22 3.95 3 2 1 12 2 4 1 1 1 1 1 1 1 1 1 1 1 1 41.491 41.209 2 3.9701E-10 93158 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 150.35 112.26 323000000 52801000 69034000 0 9144200 11004000 12624000 14721000 9674600 6254700 10645000 29688000 23981000 8541500 17471000 47419000 45892 2043 41145 384932;384933;384934;384935;384936;384937;384938;384939;384940;384941;384942;384943;384944;384945;384946;384947;384948;384949 303592;303593;303594;303595;303596;303597;303598;303599;303600;303601;303602;303603;303604;303605;303606;303607;303608;303609;303610;303611;303612;303613 303601 21 SEETNQQEVANSLAK Unmodified 1646.7748 0.77475768 467 O75165 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching 10 0 6 1 1 1 1 1 1 37.65 37.81 2 5.9266E-23 41529 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 121.08 95.639 17495000 0 0 0 0 2620500 0 2811200 2297800 0 3395200 0 3898000 0 2471900 0 45893 467 41146 384950;384951;384952;384953;384954;384955 303614;303615;303616 303615 3 SEETNTEIVECILK Unmodified 1663.7975 0.79746695 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching 7.5 3.55 1 1 4 2 1 1 1 1 83.109 81.573 2 2.7299E-29 101238 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 135.66 124.13 67873000 0 58377000 0 0 0 0 0 0 0 3784700 0 3923400 1788300 0 0 45894 1492 41147 384956;384957;384958;384959;384960;384961 303617;303618;303619 303617 3 SEETVSGLK Unmodified 948.47639 0.47639081 2179 Q10570 CPSF1 Cleavage and polyadenylation specificity factor subunit 1 yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 21.661 21.756 2 0.021188 22525 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 52.482 14.836 42602000 0 0 0 3951300 2809300 5781100 5499400 0 0 6201700 0 0 8223100 0 10136000 45895 2179 41148 384962;384963;384964;384965;384966;384967;384968;384969 303620;303621;303622 303620 3 SEEVFDEWVSK Unmodified 1353.6089 0.60886155 4401 Q9H4L5 OSBPL3 Oxysterol-binding protein-related protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 75.408 75 2 0.00033932 86563 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 88.681 78.157 77448000 0 30770000 0 3583200 0 5825500 3000700 0 4440200 5409300 0 7069700 5029600 3429400 8890200 45896 4401 41149 384970;384971;384972;384973;384974;384975;384976;384977;384978;384979;384980 303623;303624;303625;303626;303627;303628;303629;303630;303631;303632;303633 303623 11 SEEWADNHLPLTDAELAR Unmodified 2065.9705 0.97049737 421 O60664 PLIN3 Perilipin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 1 2 1 2 2 2 2 2 2 2 3 77.69 77.785 2;3 4.4383E-128 89499 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 201.72 181.34 1621800000 0 0 0 28554000 43217000 152450000 50705000 181830000 112780000 148500000 122590000 198980000 105710000 123490000 352940000 45897 421 41150 384981;384982;384983;384984;384985;384986;384987;384988;384989;384990;384991;384992;384993;384994;384995;384996;384997;384998;384999;385000;385001;385002 303634;303635;303636;303637;303638;303639;303640;303641;303642;303643;303644;303645;303646;303647;303648;303649;303650;303651;303652;303653;303654;303655;303656 303641 23 SEFIDLSEK Unmodified 1066.5183 0.51825563 4479 Q9H9Y6 POLR1B DNA-directed RNA polymerase I subunit RPA2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 64.891 59.559 2 0.016565 76528 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.893 58.042 46389000 0 46389000 0 0 0 0 0 0 0 0 0 0 0 0 0 45898 4479 41151 385003;385004 303657 303657 1 SEFLATK Unmodified 794.41742 0.41741937 3266 Q8IXQ6 PARP9 Poly [ADP-ribose] polymerase 9 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 33.664 29.085 2 0.031978 37806 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.284 42.311 20085000 0 20085000 0 0 0 0 0 0 0 0 0 0 0 0 0 45899 3266 41152 385005;385006 303658 303658 1 SEFLSTAPR Unmodified 1006.5084 0.50835964 2283 Q13416 ORC2 Origin recognition complex subunit 2 yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 42.831 42.997 2 0.0059097 48160 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 76.478 42.474 291790000 0 0 0 21749000 18385000 19523000 21848000 18093000 20969000 25572000 33694000 38674000 35859000 0 37420000 45900 2283 41153 385007;385008;385009;385010;385011;385012;385013;385014;385015;385016;385017 303659;303660;303661 303659 2 SEFQLLVDQARK Unmodified 1432.7674 0.76742787 4622 Q9NS91 RAD18 E3 ubiquitin-protein ligase RAD18 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 71.847 70.893 3 0.0038297 93735 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.207 21.925 911330000 873110000 0 0 0 0 0 0 0 0 4892800 5568300 5179300 6264100 4506500 11804000 45901 4622 41154 385018;385019;385020;385021;385022;385023;385024 303662;303663;303664;303665;303666;303667;303668;303669 303664 8 SEFVILRDEK Unmodified 1234.6558 0.65575216 1740 P54577 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.47 3.72 5 4 6 3 3 3 1 1 1 1 1 1 58.595 55.596 2;3 4.7101E-10 69964 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 190.88 135.77 417620000 122580000 33868000 173240000 6741100 0 18103000 7047000 7850900 0 0 0 0 0 13623000 34577000 45902 1740 41155 385025;385026;385027;385028;385029;385030;385031;385032;385033;385034;385035;385036;385037;385038;385039 303670;303671;303672;303673;303674;303675;303676;303677;303678;303679;303680 303680 8 SEGALELADVSNELPGLK Unmodified 1840.9418 0.941823 2168 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.14 3.31 5 2 22 2 3 2 1 2 2 1 2 2 2 2 2 2 2 2 88.446 87.489 2;3 1.5495E-204 108082 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 252.04 179.08 5417800000 78743000 4948600000 55018000 3635800 14649000 18253000 9590300 16115000 12713000 60500000 37933000 35767000 10814000 24859000 90598000 45903 2168 41156 385040;385041;385042;385043;385044;385045;385046;385047;385048;385049;385050;385051;385052;385053;385054;385055;385056;385057;385058;385059;385060;385061;385062;385063;385064;385065;385066;385067;385068 303681;303682;303683;303684;303685;303686;303687;303688;303689;303690;303691;303692;303693;303694;303695;303696;303697;303698;303699;303700;303701;303702;303703;303704;303705 303686 24 SEGDGTQDIVDK Unmodified 1262.5626 0.56263964 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching 10 0 13 1 1 1 1 1 1 1 2 1 1 1 1 23.576 23.803 2 2.2105E-06 24464 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 129.7 118.34 208310000 0 0 0 12144000 15025000 14237000 14748000 13855000 11411000 16933000 19173000 26384000 22974000 18920000 22506000 45904 2804 41157 385069;385070;385071;385072;385073;385074;385075;385076;385077;385078;385079;385080;385081 303706;303707;303708;303709;303710;303711;303712;303713 303708 8 SEGDSVGESVHGK Acetyl (Protein N-term) 1328.5844 0.58443771 267 O15258 RER1 Protein RER1 yes yes 1 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 20.732 21.047 2 0.0023774 22108 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 57.348 42.198 10411000 0 0 0 0 0 2292100 0 0 0 0 0 0 0 3713900 4404900 45905 267 41158 385082;385083;385084 303714 303714 1 SEGDSVGESVHGKPSVVYR Acetyl (Protein N-term) 2029.9705 0.97049737 267 O15258 RER1 Protein RER1 yes yes 1 0 1 By MS/MS By MS/MS 10 0 2 1 1 45.485 45.31 3 0.00021983 51341 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 54.288 44.63 10851000 0 0 0 0 5761900 0 0 0 0 5089400 0 0 0 0 0 45906 267 41159 385085;385086 303715;303716 303716 2 SEGEGEAASADDGSLNTSGAGPK Unmodified 2105.8985 0.89851422 4704 Q9NWV8 BABAM1 BRISC and BRCA1-A complex member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.132 33.321 2 2.3893E-77 36304 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 180.62 173.42 117910000 0 0 0 6974700 3735500 9198300 7566700 7025300 0 13117000 14740000 14953000 9423900 12021000 19155000 45907 4704 41160 385087;385088;385089;385090;385091;385092;385093;385094;385095;385096;385097;385098 303717;303718;303719;303720;303721;303722;303723;303724;303725;303726;303727;303728;303729 303722 13 SEGEIAR Unmodified 760.37153 0.37153181 1620 P50395 GDI2 Rab GDP dissociation inhibitor beta yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 8.8016 5.3584 2 0.015952 7645 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.38 50.634 261350000 19610000 241740000 0 0 0 0 0 0 0 0 0 0 0 0 0 45908 1620 41161 385099;385100 303730 303730 1 SEGEIARCK Unmodified 1048.4971 0.49714303 1620 P50395 GDI2 Rab GDP dissociation inhibitor beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 8.0498 5.012 2 0.013539 8530 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 127.56 105.43 655240000 58278000 327380000 269580000 0 0 0 0 0 0 0 0 0 0 0 0 45909 1620 41162 385101;385102;385103 303731 303731 0 SEGESQTVLSSGSDPK Acetyl (Protein N-term) 1648.7428 0.74278885 4913 Q9UHY1 NRBP1 Nuclear receptor-binding protein yes yes 1 0 0 By MS/MS By MS/MS 5.5 4.5 1 1 1 1 91.984 97.248 2 2.1051E-05 75576 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 122.33 115.64 6751900 6751900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45910 4913 41163 385104;385105 303732;303733 303733 2 SEGETIMSSSMGK Oxidation (M) 1358.5694 0.56938127 1538 P48444 ARCN1 Coatomer subunit delta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.88 2.7 3 2 29 1 4 2 1 3 3 1 3 2 3 3 2 3 3 24.902 24.419 2 7.4249E-14 32449 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.74 114.58 218540000 5332500 98229000 0 8211900 3061500 12261000 9233800 4934800 6492700 10533000 9570300 15231000 9307200 11094000 15049000 45911 1538 41164 385106;385107;385108;385109;385110;385111;385112;385113;385114;385115;385116;385117;385118;385119;385120;385121;385122;385123;385124;385125;385126;385127;385128;385129;385130;385131;385132;385133;385134;385135;385136;385137;385138;385139 303734;303735;303736;303737;303738;303739;303740;303741;303742;303743;303744;303745;303746;303747;303748;303749;303750;303751;303752;303753;303754;303755;303756;303757 303741 2448;2449 17 SEGETIMSSSMGK Unmodified 1342.5745 0.57446665 1538 P48444 ARCN1 Coatomer subunit delta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 41.353 40.361 2 4.0368E-06 45072 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 118.23 91.719 433980000 12153000 260040000 0 4899300 5124700 15221000 9332100 9597000 10263000 12788000 17961000 17689000 12676000 14644000 31588000 45912 1538 41164 385140;385141;385142;385143;385144;385145;385146;385147;385148;385149;385150;385151;385152;385153;385154 303758;303759;303760;303761;303762;303763;303764;303765;303766;303767;303768;303769;303770;303771;303772 303768 15 SEGETIMSSSMGK 2 Oxidation (M) 1374.5643 0.56429589 1538 P48444 ARCN1 Coatomer subunit delta yes yes 0 2 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 14 2 2 1 2 1 2 1 2 1 12.406 12.512 2 0.000123 11607 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 80.763 80.26 46776000 0 0 0 4597000 3836600 4182400 7266200 0 2556400 0 7639100 4822200 8780500 3095300 0 45913 1538 41164 385155;385156;385157;385158;385159;385160;385161;385162;385163;385164;385165;385166;385167;385168 303773;303774;303775;303776;303777;303778;303779;303780;303781 303779 2448;2449 8 SEGEVARCK Unmodified 1034.4815 0.48149296 1294 P31150 GDI1 Rab GDP dissociation inhibitor alpha yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 5.8993 2.5985 2 0.0080072 4622 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 137.9 75.246 128910000 0 128910000 0 0 0 0 0 0 0 0 0 0 0 0 0 45914 1294 41165 385169;385170 303782;303783 303782 2 SEGFDTYR Unmodified 973.41412 0.4141249 959 P12004 PCNA Proliferating cell nuclear antigen yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.701 30.89 2 0.022715 32413 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.9 83.264 281270000 0 0 0 8290300 8866100 6667800 7477700 10394000 4467000 14178000 42660000 26601000 13702000 34043000 103920000 45915 959 41166 385171;385172;385173;385174;385175;385176;385177;385178;385179;385180;385181;385182 303784;303785;303786 303785 2 SEGFDTYRCDR Unmodified 1404.5728 0.57282717 959 P12004 PCNA Proliferating cell nuclear antigen yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 28.379 28.664 3 0.00021227 29894 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.813 82.491 141960000 0 0 0 3500900 0 2678900 0 4522600 0 6341900 28195000 22089000 10506000 15964000 48166000 45916 959 41167 385183;385184;385185;385186;385187;385188;385189;385190;385191 303787;303788;303789;303790;303791;303792 303788 6 SEGFHDILPK Unmodified 1141.5768 0.57677356 3238 Q8IWC1 MAP7D3 MAP7 domain-containing protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 4 1 1 2 62.753 57.316 3 0.029894 73935 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 34.755 20.081 39379000 4665100 18710000 16004000 0 0 0 0 0 0 0 0 0 0 0 0 45917 3238 41168 385192;385193;385194;385195 303793;303794 303793 2 SEGFYTIDK Unmodified 1058.492 0.49204087 5057 Q9UPS6 SETD1B Histone-lysine N-methyltransferase SETD1B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.725 47.888 2 0.045538 53718 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 43.185 27.814 61221000 0 0 0 3365500 2708600 4434400 2543900 5000800 4003200 6311500 4983700 7595600 8436800 5874000 5962600 45918 5057 41169 385196;385197;385198;385199;385200;385201;385202;385203;385204;385205;385206;385207 303795;303796 303795 2 SEGGEDYTGATVIEPLK Unmodified 1764.8418 0.84177461 1234 P28340 POLD1 DNA polymerase delta catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.488 69.564 2 5.6249E-53 79853 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 202.32 184.51 426580000 0 0 0 25218000 24950000 31616000 31024000 26071000 25071000 38626000 42235000 49899000 37991000 34157000 59720000 45919 1234 41170 385208;385209;385210;385211;385212;385213;385214;385215;385216;385217;385218;385219 303797;303798;303799;303800;303801;303802;303803;303804;303805;303806;303807;303808;303809 303803 13 SEGGFIWACK Unmodified 1153.5226 0.5226295 552 O75874 IDH1 Isocitrate dehydrogenase [NADP] cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 66.596 66.757 2 0.0066962 76380 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 64.265 51.908 66002000 0 0 0 3618700 0 0 0 0 0 0 11788000 10476000 0 8766500 31352000 45920 552 41171 385220;385221;385222;385223;385224 303810;303811;303812;303813;303814 303811 5 SEGGLSAAPAR Unmodified 1014.5094 0.50942227 1805 P59780 AP3S2 AP-3 complex subunit sigma-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 20.743 21.111 2 0.00026373 21866 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 91.867 72.772 81834000 0 0 0 0 0 0 14142000 0 0 0 25640000 0 22042000 0 20009000 45921 1805 41172 385225;385226;385227;385228;385229;385230;385231;385232;385233;385234;385235 303815;303816;303817;303818;303819;303820;303821;303822;303823;303824;303825 303822 11 SEGGLSAAPARAVSAVK Unmodified 1569.8475 0.84746911 1805 P59780 AP3S2 AP-3 complex subunit sigma-2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 55.435 48.911 2;3 0.00067832 66687 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.809 46.566 113390000 84821000 17914000 10653000 0 0 0 0 0 0 0 0 0 0 0 0 45922 1805 41173 385236;385237;385238;385239 303826;303827;303828 303827 2 SEGLITSENEK Unmodified 1205.5776 0.57756142 2113 Q05209 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 27.608 27.303 2 0.00033372 29002 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 96.342 69.958 92196000 0 46096000 0 2750200 2667200 0 3961100 4531400 4798600 6222300 7514900 8545000 0 5109200 0 45923 2113 41174 385240;385241;385242;385243;385244;385245;385246;385247;385248;385249;385250 303829;303830;303831;303832;303833;303834;303835;303836;303837;303838;303839;303840;303841 303839 12 SEGSAQAAPGPGSPQLPAGPQESAAEPTPAVPLK Unmodified 3193.5891 0.58913574 4208 Q9BWE0 REPIN1 Replication initiator 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 77.255 77.3 3 3.2363E-32 89387 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 59.426 51.457 80447000 0 0 0 6349800 8701700 8508000 9234900 5626100 4078300 7409000 6048900 0 5092800 6817600 12580000 45924 4208 41175 385251;385252;385253;385254;385255;385256;385257;385258;385259;385260;385261 303842;303843;303844;303845;303846;303847;303848;303849;303850 303845 9 SEGSLAYVK Unmodified 952.48656 0.48656157 3909 Q96KP1 EXOC2 Exocyst complex component 2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 36.922 32.164 2 0.046392 41863 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.782 10.866 84413000 0 84413000 0 0 0 0 0 0 0 0 0 0 0 0 0 45925 3909 41176 385262;385263 303851 303851 1 SEGTPAWYMHGER Unmodified 1519.6514 0.65141184 3432 Q8NEY1 NAV1 Neuron navigator 1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 46.055 46.358 3 0.040115 51497 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 29.491 27.658 21089000 0 0 0 0 0 4914300 0 0 0 5158600 0 5819500 0 5196700 0 45926 3432 41177 385264;385265;385266;385267 303852 303852 1 SEGTYLNSVIESHTEFIFTTIK Unmodified 2515.2482 0.24823536 1441 P41252 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS 2.67 0.471 1 2 2 1 97.716 92.732 3 1.9041E-20 116496 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.18 99.182 27239000 24701000 2537900 0 0 0 0 0 0 0 0 0 0 0 0 0 45927 1441 41178 385268;385269;385270 303853;303854;303855 303855 3 SEGVVAVLLTK Unmodified 1114.6598 0.6597749 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.748 79.806 2 0.00059879 92320 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 79.974 68.614 615150000 0 0 0 17433000 18378000 67046000 32021000 27082000 21640000 77051000 56866000 73022000 39584000 52117000 132920000 45928 1565 41179 385271;385272;385273;385274;385275;385276;385277;385278;385279;385280;385281;385282 303856;303857;303858;303859;303860;303861;303862;303863;303864;303865;303866;303867 303867 12 SEHLSVRPQTALEENETQK Unmodified 2195.0818 0.081838734 5163 Q9Y3D9 MRPS23 28S ribosomal protein S23, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 4 12 2 2 1 2 1 1 1 2 1 2 1 44.342 43.074 3;4 6.5888E-06 60961 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.105 58.065 126280000 34716000 0 7651200 0 5367000 9732600 0 4045000 0 8584200 11133000 18132000 7433700 12280000 7203600 45929 5163 41180 385283;385284;385285;385286;385287;385288;385289;385290;385291;385292;385293;385294;385295;385296;385297;385298 303868;303869;303870;303871 303871 2 SEHPGLSIGDTAK Unmodified 1310.6466 0.64664404 1207 P26583 HMGB2 High mobility group protein B2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.88 3.47 7 2 24 3 4 2 2 2 2 2 2 2 2 2 2 2 2 2 35.826 34.75 2;3 9.9569E-22 37008 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 142.71 103.4 8863200000 249320000 5924000000 1509000000 47152000 41311000 56863000 50464000 48330000 37741000 62727000 242470000 154960000 55631000 109730000 273580000 45930 1207 41181 385299;385300;385301;385302;385303;385304;385305;385306;385307;385308;385309;385310;385311;385312;385313;385314;385315;385316;385317;385318;385319;385320;385321;385322;385323;385324;385325;385326;385327;385328;385329;385330;385331 303872;303873;303874;303875;303876;303877;303878;303879;303880;303881;303882;303883;303884;303885;303886;303887;303888;303889;303890;303891;303892;303893;303894;303895;303896;303897;303898;303899;303900;303901;303902;303903 303897 23 SEHPPLCGR Unmodified 1051.4869 0.48691269 2528 Q15393 SF3B3 Splicing factor 3B subunit 3 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 14.602 14.769 2 0.017056 14139 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 56.011 33.88 87122000 0 0 0 0 4169000 5426700 4308300 4531900 4783000 10635000 13504000 12269000 11882000 15614000 0 45931 2528 41182 385332;385333;385334;385335;385336;385337;385338;385339;385340;385341 303904;303905;303906;303907;303908;303909;303910;303911;303912 303907 9 SEHPPLCGRDHLSFR Unmodified 1806.8584 0.85838492 2528 Q15393 SF3B3 Splicing factor 3B subunit 3 yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS 10 0 5 1 1 1 1 1 42.366 42.816 4 0.002863 46889 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 33.44 23.903 86257000 0 0 0 0 0 0 0 0 6235800 0 0 12114000 11708000 6833500 49366000 45932 2528 41183 385342;385343;385344;385345;385346 303913;303914 303914 2 SEHQFNIDSMVHK Unmodified 1570.7198 0.71982575 423 O60678 PRMT3 Protein arginine N-methyltransferase 3 yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 1 2 62.848 56.159 3;4 0.0008035 74961 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.868 70.181 82832000 23687000 59145000 0 0 0 0 0 0 0 0 0 0 0 0 0 45933 423 41184 385347;385348;385349 303915;303916;303917;303918 303918 3 SEHQFNIDSMVHK Oxidation (M) 1586.7147 0.71474038 423 O60678 PRMT3 Protein arginine N-methyltransferase 3 yes yes 0 1 0 By MS/MS 2 0 1 1 41.129 34.449 3 0.008142 47325 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.115 42.341 33150000 33150000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45934 423 41184 385350 303919 303919 534 1 SEHQKLEENIDNIK Unmodified 1695.8428 0.84277766 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 35.847 36.225 3 0.039501 38488 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 28.598 19.149 61405000 0 0 0 0 0 0 0 4690300 4575400 6696700 5976100 8452200 12672000 6556800 11785000 45935 3676 41185 385351;385352;385353;385354;385355;385356;385357;385358 303920 303920 1 SEHQNSSPTCQEDEEDVR Unmodified 2145.8505 0.85051817 4538 Q9NP74 PALMD Palmdelphin yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 16.03 16.465 3 7.8528E-05 15485 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.475 57.473 8364100 0 0 0 0 0 0 0 0 0 0 1838600 0 0 2425700 4099800 45936 4538 41186 385359;385360;385361 303921;303922 303921 2 SEHSLFQAK Unmodified 1045.5193 0.51925868 3432 Q8NEY1 NAV1 Neuron navigator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 30.881 26.382 2 1.4745E-07 36935 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 160.26 127.42 32793000 28377000 0 4416100 0 0 0 0 0 0 0 0 0 0 0 0 45937 3432 41187 385362;385363;385364 303923;303924 303923 2 SEHTAPPPEEPTDK Unmodified 1533.6947 0.69471644 3908 Q96KM6 ZNF512B Zinc finger protein 512B yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.335 15.506 3 0.0049526 14281 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.388 30.243 40307000 0 0 0 2595700 1857800 2778400 2668900 1850600 2654300 2470300 3033800 5143100 4838200 4563300 5852600 45938 3908 41188 385365;385366;385367;385368;385369;385370;385371;385372;385373;385374;385375;385376 303925;303926;303927;303928;303929;303930;303931;303932;303933 303929 7 SEHTVFIMPPEPPPDDGK Unmodified 1991.9299 0.92987811 2830 Q5VZ89 DENND4C DENN domain-containing protein 4C yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 2 2 1 73.594 72.981 3 1.1853E-05 83166 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.546 53.625 68023000 0 24755000 0 5388800 0 0 5386800 0 0 6426600 5965600 0 0 7940000 12160000 45939 2830 41189 385377;385378;385379;385380;385381;385382;385383;385384;385385;385386 303934;303935;303936;303937;303938;303939;303940;303941;303942 303937 8 SEIADLNVR Unmodified 1015.5298 0.52982336 99 Q6KB66;CON__Q6KB66-1 KRT80 Keratin, type II cytoskeletal 80 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.227 49.386 2 0.0036487 56034 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 95.531 30.278 + 464320000 0 0 0 85856000 23573000 31965000 19287000 66995000 19521000 36637000 32605000 57272000 50465000 23517000 16622000 45940 99 41190 385387;385388;385389;385390;385391;385392;385393;385394;385395;385396;385397;385398 303943;303944;303945;303946;303947;303948;303949;303950;303951;303952;303953;303954 303943 12 SEIAELNR Unmodified 930.47706 0.47705951 77 CON__P19013;P19013 KRT4 Keratin, type II cytoskeletal 4 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.075 32.262 2 0.012551 35556 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 139.31 76.596 + 581050000 0 0 0 15216000 15306000 16362000 117560000 213850000 18741000 26223000 25365000 26867000 50619000 23384000 31561000 45941 77 41191 385399;385400;385401;385402;385403;385404;385405;385406;385407;385408;385409;385410 303955;303956;303957 303955 1 SEICTEEPQK Unmodified 1219.5391 0.53906742 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 19.747 19.954 2 0.0019383 20349 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 99.442 79.112 107080000 0 0 0 8311100 8277700 6957900 10274000 0 6226100 11310000 8138600 16095000 12632000 8583200 10269000 45942 3443 41192 385411;385412;385413;385414;385415;385416;385417;385418;385419;385420;385421 303958;303959;303960;303961;303962;303963;303964;303965;303966;303967;303968;303969;303970 303959 13 SEIDLFNIR Unmodified 1105.5768 0.57677356 873 P08758 ANXA5 Annexin A5 yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 82.72 82.794 2 0.0085848 95942 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 69.198 55.292 20327000 0 0 0 561420 0 0 765650 771310 0 1276700 4306500 4842200 0 7803700 0 45943 873 41193 385422;385423;385424;385425;385426;385427;385428;385429 303971;303972;303973;303974;303975 303974 5 SEIDLFNIRK Unmodified 1233.6717 0.67173657 873 P08758 ANXA5 Annexin A5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 1 1 1 1 2 2 1 2 2 72.368 72.526 2;3 0.00058256 82599 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 78.939 61.572 556900000 0 0 0 9073800 0 13587000 10784000 14966000 9348800 14368000 65631000 65416000 7376200 52643000 293710000 45944 873 41194 385430;385431;385432;385433;385434;385435;385436;385437;385438;385439;385440;385441;385442;385443;385444 303976;303977;303978;303979;303980;303981;303982;303983;303984;303985;303986 303983 10 SEIDLLDIR Unmodified 1072.5764 0.57643921 968 P12429 ANXA3 Annexin A3 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 81.32 81.489 2 0.0052698 93894 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.334 50.452 27604000 0 0 0 0 0 0 0 0 0 0 4720300 2921500 0 2447500 17514000 45945 968 41195 385445;385446;385447;385448 303987;303988;303989 303987 3 SEIDLLNIRR Unmodified 1227.6935 0.69353465 857 P08133 ANXA6 Annexin A6 yes yes 0 0 1 By MS/MS 10 0 1 1 69.225 69.691 3 0.021056 79386 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.541 16.796 8213200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8213200 45946 857 41196 385449 303990 303990 1 SEIDLNLIK Unmodified 1043.5863 0.58627561 2812 Q5VT79;P13928 ANXA8L2;ANXA8 Annexin A8-like protein 2;Annexin A8 yes no 0 0 0 By MS/MS 10 0 1 1 78.481 78.679 2 0.046681 90927 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 42.914 3.2515 2734600 0 0 0 0 0 0 0 0 0 0 2734600 0 0 0 0 45947 2812 41197 385450 303991 303991 1 SEIDLVQIK Unmodified 1043.5863 0.58627561 1100 P20073 ANXA7 Annexin A7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.341 68.419 2 0.0033609 79091 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 90.308 17.816 494230000 0 0 0 27668000 15904000 51799000 32601000 27691000 21539000 62011000 46855000 46367000 36065000 44332000 81393000 45948 1100 41198 385451;385452;385453;385454;385455;385456;385457;385458;385459;385460;385461;385462 303992;303993;303994;303995;303996;303997;303998;303999;304000;304001;304002;304003 304003 12 SEIDMNDIK Oxidation (M) 1079.4805 0.48048991 773 P04083 ANXA1 Annexin A1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 24.681 24.823 2 0.0085076 25949 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 60.59 33.988 81333000 0 0 0 10722000 3679100 5749200 8497000 14406000 0 5432400 7408600 0 7301700 0 18137000 45949 773 41199 385463;385464;385465;385466;385467;385468;385469;385470;385471 304004;304005;304006;304007;304008;304009;304010;304011 304009 929 8 SEIDNVK Unmodified 803.4025 0.40249759 780 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 no no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 21 2 2 2 1 2 2 2 2 2 2 1 1 13.508 13.66 1;2 6.932E-05 12861 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 181.49 93.459 + 1852700000 0 0 0 351570000 76395000 137410000 4497100 365540000 88170000 11044000 174690000 412630000 224070000 3334900 3360900 45950 780 41200 385472;385473;385474;385475;385476;385477;385478;385479;385480;385481;385482;385483;385484;385485;385486;385487;385488;385489;385490;385491;385492 304012;304013;304014;304015;304016;304017;304018;304019;304020;304021;304022 304018 10 SEIDNVKK Unmodified 931.49746 0.4974606 780 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 2 1 1 1 1 1 1 1 1 1 9.1089 9.2055 2 0.0092107 7476 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 125.81 59.741 + 498370000 0 0 0 87873000 16032000 13987000 15523000 123540000 9884700 27493000 15413000 130230000 44819000 13569000 0 45951 780 41201 385493;385494;385495;385496;385497;385498;385499;385500;385501;385502;385503;385504 304023;304024;304025;304026;304027 304025 0 SEIDQINK Unmodified 945.47673 0.47672516 1118 P21127 CDK11B Cyclin-dependent kinase 11B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 26.067 21.864 2 0.016583 28810 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.9 9.2288 83826000 0 83826000 0 0 0 0 0 0 0 0 0 0 0 0 0 45952 1118 41202 385505;385506;385507;385508 304028;304029;304030;304031 304029 4 SEIEVISEPPEEK Unmodified 1484.7246 0.72461959 451 O75044 SRGAP2 SLIT-ROBO Rho GTPase-activating protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 56.973 57.039 2 0.00036654 64815 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 99.283 84.017 26501000 0 0 0 0 4920900 0 3949800 0 0 6730800 6754800 0 0 4144600 0 45953 451 41203 385509;385510;385511;385512;385513;385514;385515;385516;385517 304032;304033;304034;304035;304036;304037;304038;304039;304040 304033 9 SEIEYYAMLAK Unmodified 1316.6322 0.63223953 1924 P62888 RPL30 60S ribosomal protein L30 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.79 2.8 2 1 16 2 1 1 2 2 2 1 1 2 1 1 1 1 1 68.019 67.488 2 0.0047988 89772 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.92 63.43 215060000 0 92772000 4027400 6085700 4446400 11542000 7594200 5688100 3905300 13869000 8528800 11234000 8644900 12703000 24024000 45954 1924 41204 385518;385519;385520;385521;385522;385523;385524;385525;385526;385527;385528;385529;385530;385531;385532;385533;385534;385535;385536 304041;304042;304043;304044;304045;304046;304047;304048;304049;304050;304051;304052;304053;304054;304055 304046 15 SEIEYYAMLAK Oxidation (M) 1332.6272 0.62715415 1924 P62888 RPL30 60S ribosomal protein L30 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS 10 0 10 1 2 1 1 1 1 1 2 70.657 70.846 2 0.0055355 81096 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.948 70.674 63729000 0 0 0 0 0 6445200 7924600 4348700 3882500 6357000 0 0 11123000 6573800 17074000 45955 1924 41204 385537;385538;385539;385540;385541;385542;385543;385544;385545;385546 304056;304057;304058;304059 304059 3102 1 SEIHSINITIER Unmodified 1410.7467 0.74669243 3200 Q86XX4 FRAS1 Extracellular matrix protein FRAS1 yes yes 0 0 0 By MS/MS 2 0 2 2 82.292 77.587 2 0.0090926 96438 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.305 33.371 206810000 0 206810000 0 0 0 0 0 0 0 0 0 0 0 0 0 45956 3200 41205 385547;385548 304060 304060 1 SEIIPMFSNLASDEQDSVR Oxidation (M) 2152.9947 0.99466321 1271 P30153 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 38 2 3 4 3 4 2 3 3 3 3 4 4 82.627 82.705 2;3 7.1636E-42 95575 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 121.76 109.84 513730000 0 0 0 4547900 21555000 41950000 15018000 26870000 13692000 59833000 53001000 57876000 23072000 48515000 147800000 45957 1271 41206 385549;385550;385551;385552;385553;385554;385555;385556;385557;385558;385559;385560;385561;385562;385563;385564;385565;385566;385567;385568;385569;385570;385571;385572;385573;385574;385575;385576;385577;385578;385579;385580;385581;385582;385583;385584;385585;385586 304061;304062;304063;304064;304065;304066;304067;304068;304069;304070;304071;304072;304073;304074;304075;304076;304077;304078;304079;304080;304081;304082 304082 1878 18 SEIIPMFSNLASDEQDSVR Unmodified 2136.9997 0.99974859 1271 P30153 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 2 88.977 89.118 2;3 3.7228E-05 103069 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.156 71.002 27868000 0 0 0 0 0 0 0 0 0 3710400 2657100 0 0 1658200 19842000 45958 1271 41206 385587;385588;385589;385590;385591;385592 304083;304084;304085;304086;304087;304088 304084 5 SEILPASLQSATARPTSR Unmodified 1884.0065 0.0064889465 2578 Q15788 NCOA1 Nuclear receptor coactivator 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 63.758 63.794 3 0.0063357 72262 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 31.801 4.7716 24451000 0 0 0 0 2318600 2789000 3697700 0 2685600 5896100 0 0 3709400 3354700 0 45959 2578 41207 385593;385594;385595;385596;385597;385598;385599 304089;304090;304091 304090 3 SEILRTQMLVTTPEK Oxidation (M) 1760.9342 0.93423521 3320 Q8N3C0 ASCC3 Activating signal cointegrator 1 complex subunit 3 yes yes 0 1 1 By MS/MS 2 0 1 1 65.083 56.795 3 0.0093562 76398 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.791 32.351 5206600 5206600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45960 3320 41208 385600 304092 304092 4909 1 SEILRTQMLVTTPEK Unmodified 1744.9393 0.93932058 3320 Q8N3C0 ASCC3 Activating signal cointegrator 1 complex subunit 3 yes yes 0 0 1 By MS/MS 2 0 1 1 75.653 67.523 3 3.3769E-12 89191 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.754 73.648 28398000 28398000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45961 3320 41208 385601 304093 304093 0 SEINTEVNEK Unmodified 1161.5513 0.55134667 3233 Q8IW35 CEP97 Centrosomal protein of 97 kDa yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.909 22.116 2 0.0029872 23026 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 85.744 32.807 122820000 0 0 0 6375900 4023900 9935700 10816000 4428700 10173000 12479000 12729000 16299000 11839000 10442000 13277000 45962 3233 41209 385602;385603;385604;385605;385606;385607;385608;385609;385610;385611;385612;385613 304094;304095;304096;304097;304098;304099;304100;304101;304102;304103 304096 6 SEISELR Unmodified 832.42905 0.42904669 56;84 CON__P02533;P02533;CON__Q04695;Q04695 KRT14;KRT17 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 17 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 29.015 29.268 2 3.0661E-25 32193 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 184.16 54.198 + 382750000 0 0 0 107720000 0 27813000 24566000 0 25052000 29703000 22399000 40621000 62296000 24973000 17611000 45963 56;84 41210 385614;385615;385616;385617;385618;385619;385620;385621;385622;385623 304104;304105;304106;304107;304108;304109;304110;304111;304112;304113 304113 10 SEISELRR Unmodified 988.53016 0.53015772 56;84 CON__P02533;P02533;CON__Q04695;Q04695 KRT14;KRT17 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 17 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.22 23.424 2 0.0010294 25133 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 174.27 47.604 + 4254000000 0 0 0 832510000 199940000 166930000 189710000 566950000 102980000 350430000 241000000 429230000 812590000 144770000 216950000 45964 56;84 41211 385624;385625;385626;385627;385628;385629;385630;385631;385632;385633;385634;385635 304114;304115;304116;304117;304118;304119;304120;304121;304122;304123 304122 3 SEISENTDASGK Unmodified 1236.547 0.54698957 4893 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.31 2.4 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 19.491 20.033 2 1.8791E-14 11554 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 153.97 132.51 198240000 17990000 0 0 7998300 11966000 10556000 12695000 10966000 11214000 17200000 17185000 29090000 21816000 12474000 17087000 45965 4893 41212 385636;385637;385638;385639;385640;385641;385642;385643;385644;385645;385646;385647;385648 304124;304125;304126;304127;304128;304129;304130;304131;304132;304133;304134;304135 304124 12 SEISGDLAR Unmodified 946.47197 0.47197413 857 P08133 ANXA6 Annexin A6 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 29.012 29.506 2 0.017618 30886 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 55.531 19.345 20814000 0 0 0 0 0 0 0 0 0 0 5024100 0 0 4967900 10822000 45966 857 41213 385649;385650;385651;385652 304136;304137 304136 2 SEISSTVPQGGME Oxidation (M) 1336.5817 0.58166052 2654 Q2NL82 TSR1 Pre-rRNA-processing protein TSR1 homolog yes yes 0 1 0 By MS/MS 1 0 1 1 95.473 100.74 2 0.0018223 79316 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 81.95 77.499 19185000 19185000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45967 2654 41214 385653 304138;304139 304138 4323 2 SEITELR Unmodified 846.4447 0.44469675 72;57 CON__P13645;P13645;CON__P02535-1 KRT10 Keratin, type I cytoskeletal 10 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.369 32.555 2 0.0058553 36406 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 151.17 76.777 + 7096700000 0 0 0 1283700000 418720000 420610000 384230000 607460000 386490000 551630000 590310000 1380700000 552400000 269690000 250790000 45968 72;57 41215 385654;385655;385656;385657;385658;385659;385660;385661;385662;385663;385664;385665 304140;304141;304142;304143;304144;304145;304146;304147;304148;304149;304150 304149 10 SEITELRR Unmodified 1002.5458 0.54580778 72;57 CON__P13645;P13645;CON__P02535-1 KRT10 Keratin, type I cytoskeletal 10 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 25.037 25.24 2 1.4819E-75 25652 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 205.78 93.185 + 33669000000 0 0 0 7555700000 2277100000 2322700000 2115200000 2544500000 1688900000 3281500000 1936800000 3929600000 2994700000 1579200000 1443500000 45969 72;57 41216 385666;385667;385668;385669;385670;385671;385672;385673;385674;385675;385676;385677 304151;304152;304153;304154;304155;304156;304157;304158;304159;304160;304161;304162;304163;304164;304165;304166;304167;304168;304169;304170 304161 19 SEITNQLSVSDINSQSVGGARPK Unmodified 2386.2088 0.20883016 3086 Q7Z3T8 ZFYVE16 Zinc finger FYVE domain-containing protein 16 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 65.927 65.587 3 1.7711E-26 75177 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 95.48 89.116 52773000 0 0 3768700 0 1862400 6162500 0 6544900 0 7654600 0 6007900 0 7741000 13031000 45970 3086 41217 385678;385679;385680;385681;385682;385683;385684;385685 304171;304172;304173;304174;304175;304176;304177;304178 304171 6 SEIVPLFTSLASDEQDSVR Unmodified 2092.0324 0.032428925 1272 P30154 PPP2R1B Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 91.318 91.438 2 0.0003156 106094 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 51.875 31.212 7281200 0 0 0 0 0 0 0 0 0 1908400 0 0 0 939740 4433100 45971 1272 41218 385686;385687;385688 304179;304180 304179 2 SELDQLRQEAEQLK Acetyl (Protein N-term) 1727.869 0.86899241 1921 P62873 GNB1 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.55 1 1 4 2 1 1 1 1 85.194 83.953 2 1.5791E-26 97364 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 154.36 120.4 89842000 0 67853000 0 0 0 0 0 0 0 4105400 4600300 5214000 0 0 8069500 45972 1921 41219 385689;385690;385691;385692;385693;385694 304181;304182;304183;304184;304185;304186 304184 6 SELDVPVEILNITEK Unmodified 1697.9087 0.90873196 17 A3KN83 SBNO1 Protein strawberry notch homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 92.933 93.04 2 0.0012439 107910 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.022 61.177 30738000 0 0 0 0 1208500 1488000 1440400 1177900 1403000 5374800 4390500 2572900 0 2703100 8978400 45973 17 41220 385695;385696;385697;385698;385699;385700;385701;385702;385703;385704 304187;304188;304189;304190;304191 304188 5 SELEDFELDK Unmodified 1223.5558 0.55576334 4669 Q9NVI1 FANCI Fanconi anemia group I protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 67.466 66.035 2 0.0015191 75876 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 92.838 80.048 476960000 17437000 203650000 2536900 14093000 17372000 23325000 19210000 16925000 0 26873000 23004000 31898000 20726000 24139000 35779000 45974 4669 41221 385705;385706;385707;385708;385709;385710;385711;385712;385713;385714;385715;385716;385717;385718;385719 304192;304193;304194;304195;304196;304197;304198;304199;304200;304201;304202;304203;304204;304205;304206 304198 15 SELEFETLK Unmodified 1094.5496 0.54955575 2734 Q5JSH3 WDR44 WD repeat-containing protein 44 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 66.165 64.577 2 0.0030604 73098 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.853 64.599 220080000 7514200 143190000 0 7063800 6581400 5003600 6153100 6341800 0 10453000 0 0 0 0 27779000 45975 2734 41222 385720;385721;385722;385723;385724;385725;385726;385727;385728 304207;304208;304209;304210;304211;304212 304210 6 SELEMAQEDLSMTQK Unmodified 1738.7754 0.7753513 2155 Q08378 GOLGA3 Golgin subfamily A member 3 yes yes 0 0 0 By MS/MS 2 0 1 1 74.978 70.038 2 6.0915E-61 87665 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 184.03 148.38 46837000 0 46837000 0 0 0 0 0 0 0 0 0 0 0 0 0 45976 2155 41223 385729 304213 304213 1 SELHIENLNMEADPGQYR Oxidation (M) 2130.964 0.96403178 1362 P35613 BSG Basigin yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 62.693 62.732 3 0.00025747 70883 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 50.188 40.401 37079000 0 0 0 0 5605600 8201300 0 6083100 0 0 9143800 0 0 8044900 0 45977 1362 41224 385730;385731;385732;385733;385734 304214;304215;304216;304217 304216 2106 4 SELHIENLNMEADPGQYR Unmodified 2114.9691 0.96911716 1362 P35613 BSG Basigin yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 72.539 72.743 3 0.045575 83214 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 23.196 19.476 26553000 0 0 0 0 0 0 0 4595700 0 7722300 0 0 0 4000300 10234000 45978 1362 41224 385735;385736;385737;385738 304218 304218 1 SELIEQVMK Unmodified 1075.5583 0.5583463 3699 Q92995 USP13 Ubiquitin carboxyl-terminal hydrolase 13 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching 7.33 3.77 2 4 1 1 1 1 1 1 65.458 63.973 2 0.020833 72953 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 52.786 25.532 137190000 0 124120000 1541700 0 0 3656800 4906500 1784800 0 0 1179600 0 0 0 0 45979 3699 41225 385739;385740;385741;385742;385743;385744 304219;304220 304219 2 SELIPYLVR Unmodified 1088.623 0.62299547 4593 Q9NR50 EIF2B3 Translation initiation factor eIF-2B subunit gamma yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 81.273 81.386 2 0.016428 93733 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.547 40.911 11892000 0 0 0 0 0 3697200 0 0 0 0 0 0 0 0 8194600 45980 4593 41226 385745;385746 304221;304222 304222 2 SELIPYLVRK Unmodified 1216.718 0.71795849 4593 Q9NR50 EIF2B3 Translation initiation factor eIF-2B subunit gamma yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By matching By matching By matching 10 0 7 1 1 1 1 1 1 1 70.559 70.766 3 0.048507 81551 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 26.063 19.743 19084000 0 0 0 0 0 1553900 906860 0 1571700 2357100 2527200 3058700 0 0 7108000 45981 4593 41227 385747;385748;385749;385750;385751;385752;385753 304223 304223 1 SELIQLVAVTQK Unmodified 1327.7711 0.77111627 5058 Q9UPT5 EXOC7 Exocyst complex component 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82.035 81.06 2 3.2148E-07 101531 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.23 67.12 137130000 5895600 29887000 6551000 3645300 4651500 10725000 8315000 7881300 5959000 8472700 10732000 9502500 5789600 5773200 13350000 45982 5058 41228 385754;385755;385756;385757;385758;385759;385760;385761;385762;385763;385764;385765;385766;385767;385768 304224;304225;304226;304227;304228;304229;304230;304231;304232;304233;304234;304235;304236;304237;304238;304239 304227 16 SELLHIESQVELLRFDDSGRK Unmodified 2470.2816 0.28160117 4844 Q9UBK8 MTRR Methionine synthase reductase yes yes 0 0 2 By MS/MS 2 0 1 1 90.246 82.116 4 0.00027111 106599 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.611 47.505 14402000 14402000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45983 4844 41229 385769 304240 304240 1 SELLPAGWNNNK Unmodified 1341.6677 0.66771383 3614 Q92530 PSMF1 Proteasome inhibitor PI31 subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 65.154 65.242 2 0.0015825 73837 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.692 56.168 93346000 0 0 0 5183800 2908400 9094000 5101700 5046200 3977900 9929300 10406000 7951100 7434000 9650100 16663000 45984 3614 41230 385770;385771;385772;385773;385774;385775;385776;385777;385778;385779;385780;385781;385782 304241;304242;304243;304244;304245;304246;304247;304248;304249;304250;304251 304244 11 SELLVEQGR Unmodified 1029.5455 0.54547343 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.7 37.881 2 0.016563 40375 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.432 23.539 460940000 0 0 0 26484000 617170 39482000 34281000 35124000 25076000 45805000 54344000 50403000 48247000 41937000 59138000 45985 3676 41231 385783;385784;385785;385786;385787;385788;385789;385790;385791;385792;385793;385794 304252;304253;304254;304255;304256 304253 5 SELLVEQYLPLTEEELEK Unmodified 2161.1042 0.10419689 4020 Q99541 PLIN2 Perilipin-2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 97.057 93.032 2 0.0069612 114962 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 59.709 47.732 47493000 0 47493000 0 0 0 0 0 0 0 0 0 0 0 0 0 45986 4020 41232 385795;385796 304257;304258 304257 2 SELLVPGSQLILGPHESK Unmodified 1903.0415 0.041477469 4026 Q99575 POP1 Ribonucleases P/MRP protein subunit POP1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 83.519 83.589 3 0.00013398 96870 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 59.872 50.342 40264000 0 0 0 816960 0 3108700 0 6106900 0 5675600 4866200 6691800 0 6078100 6919600 45987 4026 41233 385797;385798;385799;385800;385801;385802;385803;385804;385805 304259;304260;304261;304262;304263;304264 304259 6 SELPLDPLPVPTEEGNPLLK Unmodified 2157.1569 0.15690116 2574 Q15758 SLC1A5 Neutral amino acid transporter B(0) yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 94.716 93.874 2 0.00048326 109158 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.189 41.53 67328000 0 60155000 0 0 0 0 0 0 0 1651900 1348300 0 0 1048100 3125100 45988 2574 41234 385806;385807;385808;385809;385810 304265;304266 304266 2 SELPQDPHTK Unmodified 1150.5619 0.56185177 2275 Q13362 PPP2R5C Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 19.857 16.701 3 0.0040124 22170 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 55.649 44.055 38719000 0 38282000 437730 0 0 0 0 0 0 0 0 0 0 0 0 45989 2275 41235 385811;385812 304267 304267 1 SELPQDVYTIK Unmodified 1291.666 0.66598249 2442 Q14738 PPP2R5D Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65.299 64.138 2 0.00033962 73490 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 99.815 79.581 1301400000 11154000 1138300000 1989000 9158000 0 19488000 9122100 4496700 8032900 21291000 18899000 19676000 6769400 10789000 22297000 45990 2442 41236 385813;385814;385815;385816;385817;385818;385819;385820;385821;385822;385823;385824;385825;385826 304268;304269;304270;304271;304272;304273;304274;304275 304269 7 SELSGNFEK Unmodified 1009.4716 0.47163978 1643 P50995 ANXA11 Annexin A11 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 31.285 30.37 2 0.003642 33404 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 89.401 29.011 741600000 10597000 518580000 3579900 0 9601300 17715000 13593000 12094000 0 23637000 19975000 25369000 22806000 19973000 44079000 45991 1643 41237 385827;385828;385829;385830;385831;385832;385833;385834;385835;385836;385837;385838;385839 304276;304277;304278;304279;304280;304281;304282;304283;304284 304278 8 SELSQNISAR Unmodified 1103.5571 0.55710075 4266 Q9BZH6 WDR11 WD repeat-containing protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 29.703 29.83 2 0.002134 31832 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 86.136 56.329 91063000 0 0 0 8298900 5507700 9015700 8143800 7052200 6949000 12013000 11229000 12076000 0 10777000 0 45992 4266 41238 385840;385841;385842;385843;385844;385845;385846;385847;385848;385849;385850 304285;304286;304287;304288;304289;304290;304291;304292;304293;304294;304295;304296 304294 12 SELSSRLDTLSAEK Unmodified 1534.7839 0.7838658 461 O75146 HIP1R Huntingtin-interacting protein 1-related protein yes yes 0 0 1 By MS/MS 2 0 1 1 59.284 55.482 3 9.5517E-07 69266 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 101.62 86.937 9477100 0 0 9477100 0 0 0 0 0 0 0 0 0 0 0 0 45993 461 41239 385851 304297 304297 0 SELSYLAHNLCEIDK Unmodified 1790.8509 0.85089951 4943 Q9UJX2 CDC23 Cell division cycle protein 23 homolog yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 87.432 80.963 3 0.0031465 102585 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 56.599 49.153 29677000 6016900 23660000 0 0 0 0 0 0 0 0 0 0 0 0 0 45994 4943 41240 385852;385853 304298;304299 304298 2 SELTDSASVLDNFK Unmodified 1524.7308 0.7307676 371 O43815 STRN Striatin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 79.97 78.848 2 1.1251E-172 97339 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 249.23 216.91 431390000 6383800 281000000 2066800 4512800 7831500 8744600 7242000 15132000 6232600 18030000 12692000 16249000 10058000 10504000 24705000 45995 371 41241 385854;385855;385856;385857;385858;385859;385860;385861;385862;385863;385864;385865;385866;385867;385868;385869 304300;304301;304302;304303;304304;304305;304306;304307;304308;304309;304310;304311;304312;304313;304314;304315;304316;304317 304303 18 SELTETQAEK Unmodified 1134.5404 0.54044763 4525 Q9HD26 GOPC Golgi-associated PDZ and coiled-coil motif-containing protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 15.764 15.658 2 0.0015746 15477 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 90.15 66.12 113490000 0 18265000 0 4451100 2679200 5937100 4428500 4930200 3593700 7671600 13740000 10585000 7479100 8978200 20751000 45996 4525 41242 385870;385871;385872;385873;385874;385875;385876;385877;385878;385879;385880;385881;385882 304318;304319;304320;304321;304322;304323;304324;304325;304326;304327 304323 10 SELVAMLEEEELRK Oxidation (M) 1690.8448 0.8447515 1416 P40616 ARL1 ADP-ribosylation factor-like protein 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.91 3.42 2 1 8 1 2 1 1 1 1 2 2 75.065 73.676 2;3 7.9751E-25 84062 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 156.01 130.58 339440000 20685000 54161000 0 23399000 0 0 0 0 0 20330000 0 61450000 38043000 32869000 88506000 45997 1416 41243 385883;385884;385885;385886;385887;385888;385889;385890;385891;385892;385893 304328;304329;304330;304331;304332;304333;304334;304335;304336;304337;304338;304339;304340 304332 2226 13 SELVAMLEEEELRK Unmodified 1674.8498 0.84983687 1416 P40616 ARL1 ADP-ribosylation factor-like protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 3.67 2.87 3 2 1 3 2 1 86.039 81.417 2;3 2.5935E-11 93403 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.288 64.335 162850000 65391000 88041000 0 0 0 0 0 0 0 0 0 0 0 0 9420100 45998 1416 41243 385894;385895;385896;385897;385898;385899 304341;304342;304343;304344;304345 304342 3 SELVANNVTLPAGEQR Unmodified 1696.8744 0.87441214 1446;1447 P42166;P42167 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin no no 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 62.727 62.671 2 5.8237E-71 71438 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 213.73 173.02 205900000 0 0 0 22569000 22959000 30510000 24588000 27262000 18888000 33837000 0 0 25292000 0 0 45999 1446;1447 41244 385900;385901;385902;385903;385904;385905;385906;385907 304346;304347;304348;304349;304350;304351 304349 6 SELVANNVTLPAGEQRK Unmodified 1824.9694 0.96937516 1446;1447 P42166;P42167 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 3 24 1 1 1 2 2 2 2 2 2 2 2 2 2 2 2 54.048 53.509 2;3 5.0786E-60 61250 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 208.27 177.38 2780600000 21112000 144550000 100470000 186610000 209300000 173080000 262360000 241810000 155970000 223010000 242240000 239810000 186350000 168440000 225510000 46000 1446;1447 41245 385908;385909;385910;385911;385912;385913;385914;385915;385916;385917;385918;385919;385920;385921;385922;385923;385924;385925;385926;385927;385928;385929;385930;385931;385932;385933;385934 304352;304353;304354;304355;304356;304357;304358;304359;304360;304361;304362;304363;304364;304365;304366;304367;304368;304369;304370;304371;304372;304373;304374;304375;304376;304377;304378;304379;304380;304381;304382;304383;304384;304385;304386;304387;304388;304389 304389 36 SEMECQNQEYK Unmodified 1444.5599 0.55987922 73;981 CON__P13646-1;P13646;CON__ENSEMBL:ENSP00000377550 KRT13 Keratin, type I cytoskeletal 13 no no 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 16.592 16.809 2 0.0010566 16280 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 75.378 37.292 + 5557900 0 0 0 0 0 0 723340 1852000 0 0 0 2982500 0 0 0 46001 73;981 41246 385935;385936;385937 304390;304391 304391 2 SEMEFIESK Unmodified 1098.4903 0.49032632 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 2 1 53.044 51.489 2 0.010372 58499 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 64.42 54.904 87460000 0 71516000 0 0 4738100 5845600 5359300 0 0 0 0 0 0 0 0 46002 5262 41247 385938;385939;385940;385941;385942;385943;385944;385945 304392;304393;304394;304395;304396;304397;304398;304399;304400;304401 304392 10 SEMEFIESK Oxidation (M) 1114.4852 0.48524094 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 33.085 31.572 2 0.026678 33707 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 44.377 32.17 19796000 0 12848000 0 0 0 3682500 0 0 0 0 0 0 0 3265900 0 46003 5262 41247 385946;385947;385948;385949;385950 304402;304403;304404;304405 304405 4 SEMESVLAQLDNYGQQELADLFVNYNVK Unmodified 3216.5285 0.52850932 1440 P41250 GARS Glycine--tRNA ligase yes yes 0 0 0 By MS/MS 3 0 1 1 102.41 98.853 3 2.1396E-08 118801 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 62.605 60.574 5035300 0 5035300 0 0 0 0 0 0 0 0 0 0 0 0 0 46004 1440 41248 385951 304406 304406 1 SEMEVQDAELK Unmodified 1277.5809 0.58093224 5067 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.21 3.43 1 2 11 1 2 1 1 1 1 1 1 1 1 1 1 1 49.141 48.304 2 5.0479E-11 48230 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 154.56 123.48 1039400000 61793000 708430000 0 9675400 4822300 6662400 5302600 5301600 0 9039600 37489000 37832000 0 27874000 125170000 46005 5067 41249 385952;385953;385954;385955;385956;385957;385958;385959;385960;385961;385962;385963;385964;385965 304407;304408;304409;304410;304411;304412;304413;304414;304415;304416;304417;304418;304419;304420 304413 14 SEMEVQDAELK Oxidation (M) 1293.5758 0.57584686 5067 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching 5.92 4.11 2 3 1 6 2 3 1 1 1 1 1 1 1 37.969 36.799 2 3.1749E-09 38140 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 136.63 117.96 375820000 135800000 149750000 3624800 0 0 0 0 8361600 3959700 6813500 40650000 0 0 26869000 0 46006 5067 41249 385966;385967;385968;385969;385970;385971;385972;385973;385974;385975;385976;385977 304421;304422;304423;304424;304425;304426;304427;304428;304429;304430;304431 304426 6437 11 SEMMEEDLQGASQVK Oxidation (M) 1696.7284 0.72840111 3662 Q92793 CREBBP CREB-binding protein yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 47.823 47.871 2 1.8949E-07 53892 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 89.283 74.311 38170000 0 0 0 3729200 3762400 2895100 3430600 2455300 3213100 6317100 5827400 0 3539700 3000500 0 46007 3662 41250 385978;385979;385980;385981;385982;385983;385984;385985;385986;385987 304432;304433;304434;304435 304432 5190;5191 3 SEMMEEDLQGASQVK Unmodified 1680.7335 0.73348649 3662 Q92793 CREBBP CREB-binding protein yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 55.594 55.632 2 1.3348E-18 62406 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 104.87 94.634 19539000 0 0 0 1269100 1476500 2581400 0 2265800 0 0 4183800 0 0 2076900 5685100 46008 3662 41250 385988;385989;385990;385991;385992;385993;385994 304436;304437;304438 304436 2 SEMMEEDLQGASQVK 2 Oxidation (M) 1712.7233 0.72331573 3662 Q92793 CREBBP CREB-binding protein yes yes 0 2 0 By matching By matching By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 33.529 33.566 2 0.0010116 36561 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 45.077 32.097 12980000 0 0 0 0 2120700 1960000 0 0 2071000 2940800 0 0 3887900 0 0 46009 3662 41250 385995;385996;385997;385998;385999 304439 304439 5190;5191 1 SEMPPVQFK Unmodified 1061.5216 0.52156686 1685 P52306 RAP1GDS1 Rap1 GTPase-GDP dissociation stimulator 1 yes yes 0 0 0 By MS/MS 2 0 1 1 63.316 57.41 2 0.02444 73885 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.342 51.706 31441000 0 31441000 0 0 0 0 0 0 0 0 0 0 0 0 0 46010 1685 41251 386000 304440 304440 1 SEMTPEELQK Oxidation (M) 1206.5438 0.54381845 1894 P62316 SNRPD2 Small nuclear ribonucleoprotein Sm D2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.34 1 2 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 23.545 23.037 2 2.7354E-11 24520 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 158.07 124.28 1374000000 29398000 138580000 0 77059000 66019000 94653000 74813000 79316000 68328000 87148000 91424000 157630000 145950000 116270000 147410000 46011 1894 41252 386001;386002;386003;386004;386005;386006;386007;386008;386009;386010;386011;386012;386013;386014;386015 304441;304442;304443;304444;304445;304446;304447;304448;304449;304450;304451;304452;304453;304454;304455;304456;304457;304458;304459;304460;304461 304443 3067 21 SEMTPEELQK Unmodified 1190.5489 0.54890383 1894 P62316 SNRPD2 Small nuclear ribonucleoprotein Sm D2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 36.365 36.018 2 0.00052853 39862 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 124.23 100.08 1730800000 60010000 0 0 85887000 79367000 106630000 105180000 108270000 79360000 132910000 171810000 178690000 149380000 171690000 301600000 46012 1894 41252 386016;386017;386018;386019;386020;386021;386022;386023;386024;386025;386026;386027;386028 304462;304463;304464;304465;304466;304467;304468;304469;304470;304471;304472;304473 304470 11 SENAVVDGPFLVEK Unmodified 1502.7617 0.76167379 3391 Q8NBF2 NHLRC2 NHL repeat-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.201 75.26 2 0.0010591 86720 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 78.903 61.039 107760000 0 0 0 3589200 3370100 8659000 5583000 5397300 3477600 10046000 13450000 16453000 4609100 8869100 24259000 46013 3391 41253 386029;386030;386031;386032;386033;386034;386035;386036;386037;386038;386039;386040 304474;304475;304476;304477;304478;304479;304480 304476 6 SENCGVPEDLLNGLK Unmodified 1643.7825 0.78248559 4034 Q99614 TTC1 Tetratricopeptide repeat protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 82.8 81.933 2 0.00014595 94460 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.155 75.942 213240000 0 174670000 0 3563600 3590000 0 4006100 4917300 0 0 7317800 0 0 5131000 10035000 46014 4034 41254 386041;386042;386043;386044;386045;386046;386047;386048;386049 304481;304482 304482 2 SENEEFVEVGR Unmodified 1293.5837 0.58370943 927 P10644 PRKAR1A cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 47.053 47.112 2 0.00026521 53015 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 107.79 81.683 58879000 0 0 0 0 4514900 12369000 8266700 5104000 4703300 12380000 0 0 11541000 0 0 46015 927 41255 386050;386051;386052;386053;386054;386055;386056 304483;304484;304485;304486;304487;304488;304489;304490;304491;304492;304493 304492 11 SENEGTSDGETYIEK Unmodified 1657.6955 0.6955043 4350 Q9H1H9 KIF13A Kinesin-like protein KIF13A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 31.156 31.352 2 7.9163E-10 34468 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 115.14 102.52 44618000 0 0 0 2689900 0 5507800 4671900 3342900 3037700 4663900 4497300 0 3670400 4420300 8116300 46016 4350 41256 386057;386058;386059;386060;386061;386062;386063;386064;386065;386066 304494;304495;304496;304497;304498;304499;304500;304501;304502;304503;304504 304494 11 SENENQEQIEESK Unmodified 1562.6696 0.6696239 3896 Q96JJ7 TMX3 Protein disulfide-isomerase TMX3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching 10 0 8 1 1 1 1 1 1 1 1 15.156 15.324 2 8.2302E-07 14895 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 94.297 84.065 23583000 0 0 0 0 2071700 2448200 2394500 0 2409700 0 0 3707100 4236900 2939000 3376100 46017 3896 41257 386067;386068;386069;386070;386071;386072;386073;386074 304505;304506;304507 304507 3 SENERLQEELNK Unmodified 1487.7216 0.72159989 4837 Q9UBD5 ORC3 Origin recognition complex subunit 3 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.287 30.476 3 0.00069949 32589 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 71.159 50.94 213850000 0 0 0 11155000 12917000 24611000 12150000 12456000 12965000 19662000 21409000 24670000 21180000 15631000 25045000 46018 4837 41258 386075;386076;386077;386078;386079;386080;386081;386082;386083;386084;386085;386086 304508;304509;304510;304511;304512;304513;304514;304515;304516 304516 6 SENFEELLK Unmodified 1107.5448 0.54480473 1247 P29373 CRABP2 Cellular retinoic acid-binding protein 2 yes yes 0 0 0 By MS/MS 10 0 1 1 74.462 73.914 2 0.0077875 85691 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 71.501 32.709 11675000 0 0 0 11675000 0 0 0 0 0 0 0 0 0 0 0 46019 1247 41259 386087 304517 304517 1 SENGLEFTSSGSANTETTK Unmodified 1958.8705 0.87050855 1129 P21796 VDAC1 Voltage-dependent anion-selective channel protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 45.222 45.414 2 0.00011376 51662 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 76.262 62.583 49793000 0 0 0 9026600 5335700 0 0 3592300 2902500 4570600 4579800 5833900 3402800 4699800 5849400 46020 1129 41260 386088;386089;386090;386091;386092;386093;386094;386095;386096;386097 304518;304519;304520;304521;304522;304523 304522 6 SENILENTDSMETDEIIPILEK Unmodified 2532.2153 0.21528025 2986 Q6VMQ6 ATF7IP Activating transcription factor 7-interacting protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 2 2 4 96.538 92.513 2;3 4.3872E-26 114399 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 143.14 120.6 46294000 0 46294000 0 0 0 0 0 0 0 0 0 0 0 0 0 46021 2986 41261 386098;386099;386100;386101 304524;304525;304526 304524 3 SENISPEEEYK Unmodified 1323.583 0.58304073 5094 Q9Y2A7 NCKAP1 Nck-associated protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 37.426 30.929 2 0.023452 43273 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.916 36.216 2957900 2957900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46022 5094 41262 386102 304527 304527 1 SENLENTVIIPDIK Unmodified 1583.8407 0.8406524 522 O75592 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 yes yes 0 0 0 By MS/MS 2 0 1 1 85.671 80.897 2 0.018393 100463 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 59.57 39.963 25896000 0 25896000 0 0 0 0 0 0 0 0 0 0 0 0 0 46023 522 41263 386103 304528 304528 1 SENNSSNSDIVHVEK Unmodified 1657.7544 0.75435658 4228 Q9BXK5 BCL2L13 Bcl-2-like protein 13 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 29.534 25.188 3 0.00051398 33055 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.326 54.765 26585000 0 26585000 0 0 0 0 0 0 0 0 0 0 0 0 0 46024 4228 41264 386104;386105 304529;304530 304529 1 SENQEFYQDTFGQQWK Unmodified 2033.8755 0.87553435 407 O60506 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q yes yes 0 0 0 By MS/MS 2 0 1 1 79.978 75.266 2 9.7102E-59 93834 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 178.71 165.71 67531000 0 67531000 0 0 0 0 0 0 0 0 0 0 0 0 0 46025 407 41265 386106 304531 304531 1 SENVQDLLLLDVAPLSLGLETAGGVMTALIK Unmodified 3179.7363 0.73631725 908 P0DMV9;P0DMV8 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 0 0 0 By MS/MS By MS/MS 2 0.707 1 2 1 2 2 107.44 104.61 3;4 1.6461E-175 95781 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 169.18 162.14 154200000 104010000 50191000 0 0 0 0 0 0 0 0 0 0 0 0 0 46026 908 41266 386107;386108;386109;386110 304532;304533;304534;304535;304536 304535 5 SENVQDLLLLDVAPLSLGLETAGGVMTALIK Oxidation (M) 3195.7312 0.73123187 908 P0DMV9;P0DMV8 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 0 1 0 By MS/MS By MS/MS 2.5 0.5 2 2 2 2 103.71 98.685 3 1.4319E-16 123112 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.687 62.54 27418000 9457600 17960000 0 0 0 0 0 0 0 0 0 0 0 0 0 46027 908 41266 386111;386112;386113;386114 304537;304538 304538 1172 2 SENVQDLLLLDVTPLSLGIETAGGVMTVLIK Unmodified 3237.7782 0.77818207 934 P11142 HSPA8 Heat shock cognate 71 kDa protein yes yes 0 0 0 By MS/MS By MS/MS 2 0.707 1 2 1 2 2 106.62 103.8 3 5.009E-197 95763 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 190.6 188.48 137400000 116780000 20625000 0 0 0 0 0 0 0 0 0 0 0 0 0 46028 934 41267 386115;386116;386117;386118 304539;304540;304541;304542;304543 304542 5 SENVQDLLLLDVTPLSLGIETAGGVMTVLIK Oxidation (M) 3253.7731 0.77309669 934 P11142 HSPA8 Heat shock cognate 71 kDa protein yes yes 0 1 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 103.71 98.208 3 6.5308E-35 122971 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.948 82.461 34707000 31509000 3197700 0 0 0 0 0 0 0 0 0 0 0 0 0 46029 934 41267 386119;386120;386121 304544;304545 304545 1217 2 SEPDLYCDPR Unmodified 1250.5238 0.52375171 2346 Q13835 PKP1 Plakophilin-1 yes yes 0 0 0 By MS/MS 10 0 1 1 41.151 40.646 2 0.010686 45949 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 55.567 51.98 8514900 0 0 0 8514900 0 0 0 0 0 0 0 0 0 0 0 46030 2346 41268 386122 304546;304547 304547 2 SEPFSPSLRPEPPK Unmodified 1566.8042 0.80420731 441 O60885 BRD4 Bromodomain-containing protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 56.994 57.101 3 0.0088153 64931 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 49.929 43.2 25421000 0 0 0 0 0 10855000 6619300 0 7946500 0 0 0 0 0 0 46031 441 41269 386123;386124;386125 304548 304548 0 SEPGGGGGEDGSAGLEVSAVQNVADVSVLQK Acetyl (Protein N-term) 2954.4105 0.41050267 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 1 0 0 By MS/MS 1 0 1 1 103.25 104.15 3 2.6007E-06 95592 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 42.536 30.794 6501900 0 6501900 0 0 0 0 0 0 0 0 0 0 0 0 0 46032 2392 41270 386126 304549 304549 1 SEPHQVDVSR Unmodified 1152.5523 0.55234972 513 O75529 TAF5L TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 13.587 13.724 3 0.0081022 13173 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 41.689 26.545 69462000 0 0 0 4604700 7355100 5623800 5077500 3833200 6022300 7679700 6420900 0 8203200 5927400 8713900 46033 513 41271 386127;386128;386129;386130;386131;386132;386133;386134;386135;386136;386137 304550;304551;304552 304550 3 SEPIPESNDGPVK Unmodified 1367.6569 0.65687437 1270 P30101 PDIA3 Protein disulfide-isomerase A3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.48 1 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42.819 42.347 2 1.6489E-33 93130 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 172.88 149.56 1734300000 437510000 15010000 8757800 49022000 42612000 45496000 54047000 68100000 42092000 67871000 185890000 170710000 83703000 116280000 347200000 46034 1270 41272 386138;386139;386140;386141;386142;386143;386144;386145;386146;386147;386148;386149;386150;386151;386152;386153 304553;304554;304555;304556;304557;304558;304559;304560;304561;304562;304563;304564;304565 304558 12 SEPIRVLVTGAAGQIAYSLLYSIGNGSVFGK Acetyl (Protein N-term) 3208.7132 0.71321404 1422 P40925 MDH1 Malate dehydrogenase, cytoplasmic yes yes 1 0 1 By MS/MS By MS/MS 2 1 1 1 1 1 108.12 108.92 3;4 5.9178E-27 123465 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 83.022 81.4 20792000 17456000 3336200 0 0 0 0 0 0 0 0 0 0 0 0 0 46035 1422 41273 386154;386155 304566;304567 304566 2 SEPIYNSR Unmodified 964.46141 0.46140945 2781 Q5T749 KPRP Keratinocyte proline-rich protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.422 19.621 2 0.018652 18764 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 64.265 44.628 427620000 0 0 0 95238000 20734000 31018000 26114000 56392000 14767000 32176000 27160000 40977000 53115000 18885000 11043000 46036 2781 41274 386156;386157;386158;386159;386160;386161;386162;386163;386164;386165;386166;386167 304568;304569;304570;304571;304572;304573 304571 5 SEPKPGLPEDLQK Unmodified 1436.7511 0.75110911 4090 Q9BQ75 CMSS1 Protein CMSS1 yes yes 0 0 1 By MS/MS 10 0 1 1 44.286 44.63 3 0.024468 50115 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 28.277 18.225 11021000 0 0 0 0 0 0 0 0 0 0 0 0 11021000 0 0 46037 4090 41275 386168 304574 304574 1 SEPMEVDEK Oxidation (M) 1078.4489 0.44885543 3662 Q92793 CREBBP CREB-binding protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 10.61 10.742 2 0.024017 9309 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 45.68 31.523 16276000 0 0 0 1535100 1358800 1332100 0 1219000 1559700 1737900 1424000 2526900 2032500 1549600 0 46038 3662 41276 386169;386170;386171;386172;386173;386174;386175;386176;386177;386178 304575;304576;304577 304577 3 SEPPTLAQPSRWSSNFK Unmodified 1930.9537 0.95372509 4365 Q9H2G2 SLK STE20-like serine/threonine-protein kinase yes yes 0 0 1 By MS/MS 2 0 1 1 75.884 67.753 3 0.0026726 89371 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.52 31.875 11357000 11357000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46039 4365 41277 386179 304578 304578 1 SEPPVSEQLDVAGR Unmodified 1482.7314 0.7314363 2988 Q6VY07 PACS1 Phosphofurin acidic cluster sorting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 54.781 54.985 2 0.0036994 62857 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 58.676 42.786 86194000 0 0 0 0 6382900 7503700 6743700 6523000 4858600 8789400 10575000 8286500 7648900 8641500 10241000 46040 2988 41278 386180;386181;386182;386183;386184;386185;386186;386187;386188;386189;386190 304579;304580;304581;304582;304583;304584;304585 304585 6 SEPQNLGGAAGR Unmodified 1155.5632 0.56324876 1829 P61020 RAB5B Ras-related protein Rab-5B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.219 20.42 2 2.6946E-05 20987 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 111.61 88.867 614760000 0 0 0 36979000 27619000 35695000 35039000 35142000 38394000 51106000 89849000 88721000 66686000 47702000 61829000 46041 1829 41279 386191;386192;386193;386194;386195;386196;386197;386198;386199;386200;386201;386202 304586;304587;304588;304589;304590;304591;304592;304593;304594;304595 304592 9 SEPQYDHTAGSSQSLSFPK Unmodified 2064.9389 0.93886289 5064 Q9UPZ3 HPS5 Hermansky-Pudlak syndrome 5 protein yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 53.642 53.351 3 0.026748 60399 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 30.684 15.762 6968100 0 0 0 2920600 0 0 4047500 0 0 0 0 0 0 0 0 46042 5064 41280 386203;386204 304596 304596 0 SEPSFLDVLGMDQLQK Oxidation (M) 1821.8819 0.88186528 5313 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 2 1 1 1 1 1 1 1 63.145 63.222 2 0.0041419 72910 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 40.589 17.672 + 123980000 0 0 0 19383000 0 0 0 4542900 0 4687200 21365000 14554000 7239400 12996000 39213000 46043 5313 41281 386205;386206;386207;386208;386209;386210;386211;386212;386213 304597 304597 6714 1 SEPTQALELTEDDIK Unmodified 1687.8152 0.81522551 324 O43396 TXNL1 Thioredoxin-like protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 73.369 73.739 2 8.4965E-10 84473 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.191 68.755 11559000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11559000 46044 324 41282 386214 304598 304598 1 SEPVINNDNPLESNDEK Unmodified 1912.865 0.86502925 1161 P23497 SP100 Nuclear autoantigen Sp-100 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 55.418 55.572 2 9.0103E-07 62405 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 97.953 88.998 31794000 0 0 0 2172500 0 0 3768800 2673300 1541800 3643500 4534500 0 4555700 3721100 5183200 46045 1161 41283 386215;386216;386217;386218;386219;386220;386221;386222;386223 304599;304600;304601;304602;304603;304604;304605 304601 7 SEPVSPQDFSFSK Unmodified 1453.6725 0.67252444 1542 P48552 NRIP1 Nuclear receptor-interacting protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 74.901 69.746 2 0.036731 87591 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 44.543 18.735 29263000 0 29263000 0 0 0 0 0 0 0 0 0 0 0 0 0 46046 1542 41284 386224 304606 304606 1 SEQAVAQLEEEK Unmodified 1359.6518 0.65178899 4321;4629 Q9H0B6;Q9NSK0 KLC2;KLC4 Kinesin light chain 2;Kinesin light chain 4 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.298 40.477 2 2.5375E-14 44878 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 152.54 119.28 466530000 0 0 0 25069000 27911000 36134000 32090000 23050000 31523000 48827000 53855000 45197000 44401000 39806000 58671000 46047 4321;4629 41285 386225;386226;386227;386228;386229;386230;386231;386232;386233;386234;386235;386236 304607;304608;304609;304610;304611;304612;304613;304614;304615;304616;304617;304618;304619;304620 304608 14 SEQDQAENEGEDSAVLMER Oxidation (M) 2151.8862 0.88623497 4033 Q99613;B5ME19 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 0 1 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 2 2 1 1 1 1 2 2 2 42.76 42.797 2;3 3.0958E-24 47628 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 102.28 96.001 98068000 0 0 0 10937000 8267500 5554100 3241600 4813100 0 6974000 22008000 0 17627000 18646000 0 46048 4033 41286 386237;386238;386239;386240;386241;386242;386243;386244;386245;386246;386247;386248;386249;386250 304621;304622;304623;304624;304625;304626 304621 5535 6 SEQDQAENEGEDSAVLMER Unmodified 2135.8913 0.89132035 4033 Q99613;B5ME19 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 52.432 52.44 2 5.8944E-24 60210 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 124.45 102.25 39842000 0 0 0 4993200 5882400 0 0 6828300 0 5268700 5110200 0 5337500 6422000 0 46049 4033 41286 386251;386252;386253;386254;386255;386256;386257 304627;304628;304629;304630;304631;304632 304631 6 SEQDQAENEGEDSAVLMERLCK Unmodified 2537.101 0.10099555 4033 Q99613;B5ME19 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 76.124 69.588 3 5.2928E-40 90020 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 123.53 119.28 45133000 24463000 20670000 0 0 0 0 0 0 0 0 0 0 0 0 0 46050 4033 41287 386258;386259 304633;304634;304635 304635 3 SEQEFSFDTPADR Unmodified 1527.6478 0.64776625 4030 Q99590 SCAF11 Protein SCAF11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.594 60.699 2 3.4796E-07 68302 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 115.18 83.754 103510000 0 0 0 4791900 7327300 4457800 7561400 5884900 5407000 7374700 9991800 11610000 13442000 8859200 16804000 46051 4030 41288 386260;386261;386262;386263;386264;386265;386266;386267;386268;386269;386270;386271 304636;304637;304638;304639;304640;304641;304642;304643;304644;304645;304646;304647 304643 12 SEQFINLR Unmodified 1005.5243 0.52434406 841 P07384 CAPN1 Calpain-1 catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 57.554 57.737 2 0.0083611 64491 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.472 65.913 318540000 0 0 0 27141000 0 35057000 0 30176000 27431000 30755000 38537000 41229000 28441000 0 59768000 46052 841 41289 386272;386273;386274;386275;386276;386277;386278;386279;386280;386281 304648;304649;304650;304651;304652;304653;304654;304655;304656;304657;304658;304659;304660 304651 12 SEQGTLTSSESHPEAAPK Unmodified 1854.8595 0.85954994 5100 Q9Y2H0 DLGAP4 Disks large-associated protein 4 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 28.445 24.129 3 0.00063721 31893 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 55.361 48.633 34796000 0 34796000 0 0 0 0 0 0 0 0 0 0 0 0 0 46053 5100 41290 386282;386283 304661;304662;304663 304662 3 SEQHGSSSGLSSSYGQHGSGSHQSSGHGR Unmodified 2868.2156 0.21559989 104 CON__Q86YZ3;Q86YZ3 HRNR Hornerin yes no 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 2 1 2 7.7137 7.9767 4;5 2.9488E-09 6469 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 42.347 38.452 + 31213000 0 0 0 0 0 0 0 0 0 0 4898000 14920000 5818300 0 5576800 46054 104 41291 386284;386285;386286;386287;386288;386289 304664;304665 304665 2 SEQHGSSSGSSSSYGQHGSGSR Unmodified 2151.8802 0.88017881 104 CON__Q86YZ3;Q86YZ3 HRNR Hornerin yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 5.5707 5.6814 4 7.2403E-81 3204 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 148.52 139.87 + 998380000 0 0 0 104550000 58982000 59854000 51178000 354270000 39617000 77227000 65241000 92300000 0 64334000 30829000 46055 104 41292 386290;386291;386292;386293;386294;386295;386296;386297;386298;386299;386300 304666;304667;304668;304669;304670;304671;304672;304673;304674;304675;304676 304675 11 SEQLHNVTAFQGK Unmodified 1457.7263 0.72629134 3893 Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.7 3.52 2 1 7 1 2 1 1 1 1 1 1 1 40.14 38.475 3 0.0083492 41317 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.621 33.306 109590000 25651000 10916000 0 6489800 7076000 12007000 0 9480900 9470900 13748000 0 0 0 0 14752000 46056 3893 41293 386301;386302;386303;386304;386305;386306;386307;386308;386309;386310 304677;304678;304679;304680;304681;304682;304683 304679 7 SEQPSLVIQK Unmodified 1127.6186 0.61863837 49 CON__ENSEMBL:ENSBTAP00000032840 yes yes 0 0 0 By MS/MS 10 0 1 1 44.182 44.329 2 0.034206 49584 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 56.81 29.848 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46057 49 41294 386311 304684 304684 1 SEQSICQAR Acetyl (Protein N-term) 1119.4979 0.49787131 3371 Q8N8S7 ENAH Protein enabled homolog no no 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.11 3.54 1 1 7 2 1 1 1 1 1 1 1 35.935 36.073 2 0.0013143 71919 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 108.46 70.223 158480000 12151000 0 0 0 0 21499000 0 16837000 0 28587000 38549000 0 9094000 31763000 0 46058 3371 41295 386312;386313;386314;386315;386316;386317;386318;386319;386320 304685;304686;304687;304688;304689;304690;304691 304686 7 SEQSICQARAAVMVYDDANK Acetyl (Protein N-term) 2297.0416 0.041630178 3371 Q8N8S7 ENAH Protein enabled homolog yes yes 1 0 1 By MS/MS By MS/MS 2 0 2 1 1 81.686 78.07 3 4.4706E-18 96819 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.488 92.729 30513000 0 27440000 3072800 0 0 0 0 0 0 0 0 0 0 0 0 46059 3371 41296 386321;386322 304692;304693;304694 304693 3 SEQSICQARAAVMVYDDANK Acetyl (Protein N-term);Oxidation (M) 2313.0365 0.0365448 3371 Q8N8S7 ENAH Protein enabled homolog yes yes 1 1 1 By MS/MS 3 0 1 1 78.227 74.808 3 0.00030906 89813 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 43.534 34.603 4525600 0 4525600 0 0 0 0 0 0 0 0 0 0 0 0 0 46060 3371 41296 386323 304695 304695 4945 1 SEQSVAQLEEEK Unmodified 1375.6467 0.64670362 2143 Q07866 KLC1 Kinesin light chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.86 3.4 1 1 5 2 1 1 1 1 1 38.141 36.738 2 7.2871E-09 41590 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 169.93 150.16 197650000 0 93304000 0 12516000 16277000 0 17528000 0 0 0 30635000 0 27390000 0 0 46061 2143 41297 386324;386325;386326;386327;386328;386329;386330 304696;304697;304698;304699 304699 3 SEQSVAQLEEEKK Unmodified 1503.7417 0.74166663 2143 Q07866 KLC1 Kinesin light chain 1 yes yes 0 0 1 By MS/MS 10 0 1 1 27.779 28.467 3 0.03438 29690 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 16.574 0 4800200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4800200 46062 2143 41298 386331 304700 304700 1 SEREGESEMEGGSER Unmodified 1667.6693 0.66930633 3811 Q96EI5 TCEAL4 Transcription elongation factor A protein-like 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 10.551 10.687 3 0.00020035 9156 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 67.136 62.245 55364000 0 0 0 3431300 3192700 4122500 3927100 2906200 2213700 3411400 6453800 7384100 5307200 4484800 8529200 46063 3811 41299 386332;386333;386334;386335;386336;386337;386338;386339;386340;386341;386342;386343 304701;304702;304703;304704;304705;304706;304707;304708;304709;304710;304711;304712 304710 12 SEREGESEMEGGSER Oxidation (M) 1683.6642 0.66422095 3811 Q96EI5 TCEAL4 Transcription elongation factor A protein-like 4 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 5.8049 5.8888 3 3.0391E-05 3902 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.834 68.943 34949000 0 0 0 4922300 3351900 2130800 3838500 3226000 1387700 4049500 3290000 4718100 4033900 0 0 46064 3811 41299 386344;386345;386346;386347;386348;386349;386350;386351;386352;386353 304713;304714;304715;304716;304717;304718;304719 304717 5336 4 SERELLEIVK Unmodified 1214.6871 0.68705229 1297 P31153 MAT2A S-adenosylmethionine synthase isoform type-2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.74 3.84 6 2 11 3 3 2 1 1 1 1 1 1 1 1 1 1 1 66.789 64.545 3 0.00064127 81374 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 96.113 70.64 1061100000 455570000 286650000 192750000 0 1978800 8342800 4420200 6915000 6599900 7884500 15974000 16967000 4488900 9928800 42627000 46065 1297 41300 386354;386355;386356;386357;386358;386359;386360;386361;386362;386363;386364;386365;386366;386367;386368;386369;386370;386371;386372 304720;304721;304722;304723;304724;304725;304726;304727;304728;304729;304730;304731;304732;304733;304734;304735;304736 304733 17 SERNSGAGSGGGGPGGAGGK Unmodified 1615.7299 0.72987317 2844 Q66K64 DCAF15 DDB1- and CUL4-associated factor 15 yes yes 0 0 1 By MS/MS 2 0 1 1 5.5884 3.3833 3 3.2052E-05 5014 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 43.696 40.378 9967300 0 0 9967300 0 0 0 0 0 0 0 0 0 0 0 0 46066 2844 41301 386373 304737 304737 1 SERPGPGGGACEPR Unmodified 1425.6419 0.64190978 503 O75462 CRLF1 Cytokine receptor-like factor 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 12.615 12.904 3 0.0070262 12133 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 26.55 19.657 28793000 0 0 0 0 0 0 4894900 3874600 0 0 5428800 9167300 0 0 5427500 46067 503 41302 386374;386375;386376;386377;386378;386379 304738;304739;304740;304741 304738 3 SERPPTILMTEEPSSPK Unmodified 1897.9455 0.94552817 2833 Q5VZK9 LRRC16A Leucine-rich repeat-containing protein 16A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61.751 60.638 3 1.166E-06 68138 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.221 73.359 175910000 6021000 35223000 20782000 4008400 6475000 12554000 7245700 5984400 4456500 9961100 14779000 14287000 7995400 6923100 19215000 46068 2833 41303 386380;386381;386382;386383;386384;386385;386386;386387;386388;386389;386390;386391;386392;386393;386394 304742;304743;304744;304745;304746;304747;304748;304749;304750;304751;304752;304753;304754;304755;304756;304757;304758 304746 16 SERPPTILMTEEPSSPK Oxidation (M) 1913.9404 0.9404428 2833 Q5VZK9 LRRC16A Leucine-rich repeat-containing protein 16A yes yes 0 1 1 By MS/MS 10 0 1 1 51.512 50.982 3 0.0018492 58100 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 51.495 44.767 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46069 2833 41303 386395 304759 304759 4497 1 SERSSSGLLEWESK Unmodified 1593.7635 0.76346471 1008 P14866 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 2 3 2 63.656 57.838 2;3 0.0018242 75002 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 63.682 56.625 226880000 100460000 77930000 48493000 0 0 0 0 0 0 0 0 0 0 0 0 46070 1008 41304 386396;386397;386398;386399;386400;386401;386402 304760;304761;304762;304763;304764;304765 304761 2 SERVVESCQAEVNK Unmodified 1633.773 0.77298354 2473 Q15018 FAM175B BRISC complex subunit Abro1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 23.263 19.766 3 0.0024319 24758 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 47.037 39.906 33724000 0 20391000 13333000 0 0 0 0 0 0 0 0 0 0 0 0 46071 2473 41305 386403;386404 304766;304767 304767 2 SERYSSSGSPANSFHFK Unmodified 1886.8547 0.85473933 150 O00418 EEF2K Eukaryotic elongation factor 2 kinase yes yes 0 0 1 By MS/MS 2 0 1 1 54.012 45.949 4 0.032376 63020 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 18.701 11.973 16614000 16614000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46072 150 41306 386405 304768 304768 1 SESAEELK Unmodified 891.41854 0.41854158 4094 Q9BQE5 APOL2 Apolipoprotein L2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 10.984 11.126 2 0.015297 9710 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 69.105 6.5322 100210000 0 0 0 5258700 4996500 10059000 9535300 10146000 7587800 8567800 8341500 10015000 9071000 7434300 9198800 46073 4094 41307 386406;386407;386408;386409;386410;386411;386412;386413;386414;386415;386416;386417 304769;304770;304771;304772 304770 4 SESAPTLHPYSPLSPK Unmodified 1709.8625 0.86245047 3542 Q8WUF5 PPP1R13L RelA-associated inhibitor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 2 2 2 1 58.935 59.025 2;3 1.5709E-42 67611 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 200.82 145.5 827320000 0 0 0 51780000 50192000 63024000 71403000 58070000 58751000 96597000 106620000 85034000 78938000 89428000 17488000 46074 3542 41308 386418;386419;386420;386421;386422;386423;386424;386425;386426;386427;386428;386429;386430;386431;386432;386433;386434;386435;386436;386437;386438;386439;386440 304773;304774;304775;304776;304777;304778;304779;304780;304781;304782;304783;304784;304785;304786;304787;304788;304789;304790;304791;304792 304787 18 SESDGNPTTEDESSRSPEDLER Unmodified 2436.0161 0.016063172 3309 Q8N196 SIX5 Homeobox protein SIX5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.596 34.796 3 2.1347E-34 38463 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 104.18 103.49 116410000 0 0 0 5523200 5701900 0 7025500 8543300 7801100 13284000 13763000 16304000 15477000 10877000 12114000 46075 3309 41309 386441;386442;386443;386444;386445;386446;386447;386448;386449;386450;386451;386452 304793;304794;304795;304796;304797;304798;304799;304800;304801;304802;304803;304804;304805;304806 304802 14 SESDLEDVGPTAEWNGDGSGSLRR Unmodified 2533.1317 0.13170205 4321 Q9H0B6 KLC2 Kinesin light chain 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 67.085 67.16 3 3.865E-15 76938 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 80.156 77.233 66347000 0 0 0 1937900 3859100 8897900 0 4097000 3979300 6775600 7858000 7982700 4737800 4842100 11379000 46076 4321 41310 386453;386454;386455;386456;386457;386458;386459;386460;386461;386462;386463 304807;304808;304809;304810;304811;304812;304813;304814;304815;304816;304817;304818;304819 304814 13 SESELIDELSEDFDRSECK Unmodified 2286.9798 0.97980101 1113 P20810 CAST Calpastatin yes yes 0 0 1 By MS/MS 2 0 1 1 92.707 84.576 3 0.00033591 109638 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.936 54.521 10578000 10578000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46077 1113 41311 386464 304820 304820 1 SESEMETDSGVPQNTGMK Unmodified 1925.7983 0.79827159 2684 Q4G0J3 LARP7 La-related protein 7 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 39.48 39.743 2 5.9043E-38 43324 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 131.06 118.29 40971000 0 0 0 0 3541500 2787100 1821700 0 0 3145800 6428800 5081800 4639300 3062800 10462000 46078 2684 41312 386465;386466;386467;386468;386469;386470;386471;386472;386473 304821;304822;304823;304824;304825;304826;304827 304823 7 SESEVEEAAAIIAQRPDNPR Unmodified 2181.0662 0.06618867 2621 Q16643 DBN1 Drebrin yes yes 0 0 1 By MS/MS By matching By MS/MS 10 0 3 1 1 1 77.099 77.235 3 0.00020087 89881 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 37.969 28.599 7388700 0 0 0 0 0 0 0 0 3383900 4004800 0 0 0 0 0 46079 2621 41313 386474;386475;386476 304828;304829 304829 2 SESEVEEAAAIIAQRPDNPREFFK Unmodified 2732.3406 0.34057262 2621 Q16643 DBN1 Drebrin yes yes 0 0 2 By MS/MS 2 0 1 1 91.544 83.414 4 0.0023892 108334 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 33.425 29.621 10254000 10254000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46080 2621 41314 386477 304830 304830 1 SESGDWHCTASWK Unmodified 1549.6256 0.62559102 3809 Q96EE3 SEH1L Nucleoporin SEH1 yes yes 0 0 0 By MS/MS 2 0 1 1 45.25 41.435 3 0.013738 52177 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 48.659 43.38 5425600 0 0 5425600 0 0 0 0 0 0 0 0 0 0 0 0 46081 3809 41315 386478 304831 304831 1 SESGGSEYGTGPGRK Unmodified 1467.659 0.65899964 2201 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 1 2 1 1 1 1 2 2 2 2 2 8.3276 8.4866 2;3 9.6119E-05 6611 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 67.115 47.511 96650000 0 0 0 6414100 4274000 5876500 4115100 3679700 3629000 1451200 24048000 9465400 15316000 8231400 10150000 46082 2201 41316 386479;386480;386481;386482;386483;386484;386485;386486;386487;386488;386489;386490;386491;386492;386493;386494;386495;386496 304832;304833;304834;304835;304836;304837;304838;304839;304840;304841;304842;304843;304844 304837 12 SESGHSQPGLYGIER Acetyl (Protein N-term) 1657.7696 0.76961272 4340 Q9H0W8 SMG9 Protein SMG9 yes yes 1 0 0 By matching By MS/MS By matching By matching By MS/MS 10 0 5 1 1 1 1 1 52.694 52.897 2 2.5973E-06 59140 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 90.653 82.14 23892000 0 0 0 0 0 2633800 0 0 4347200 6720800 5512700 0 0 4677600 0 46083 4340 41317 386497;386498;386499;386500;386501 304845;304846 304846 2 SESGNSARSSGISSQNSSTSDGDRSVSSQSSSSVSSQVTTAGSGK Unmodified 4310.9203 0.92027189 4733 Q9NXV6 CDKN2AIP CDKN2A-interacting protein yes yes 0 0 2 By MS/MS 2 0 1 1 37.5 34.068 4 0.00017573 43053 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 23.742 22.37 5933400 0 0 5933400 0 0 0 0 0 0 0 0 0 0 0 0 46084 4733 41318 386502 304847 304847 1 SESHTDLTFSR Unmodified 1278.584 0.58404378 265 O15226 NKRF NF-kappa-B-repressing factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 32.238 32.476 3 0.024974 34226 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.954 16.75 74869000 0 0 0 0 4145000 2634200 5190000 2949900 4196700 5952800 9452400 8565200 12541000 7133200 12108000 46085 265 41319 386503;386504;386505;386506;386507;386508;386509;386510;386511;386512;386513 304848 304848 1 SESHVIQDIALK Unmodified 1338.7143 0.71432967 3488 Q8TCE6 FAM45A Protein FAM45A yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 62.184 56.984 2;3 4.4804E-13 69877 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 143.79 103.94 118510000 0 105530000 12977000 0 0 0 0 0 0 0 0 0 0 0 0 46086 3488 41320 386514;386515;386516 304849;304850;304851;304852 304852 2 SESIHVTLNVEQACYTRDALAK Unmodified 2504.2329 0.23293642 2215 Q12965 MYO1E Unconventional myosin-Ie yes yes 0 0 1 By MS/MS 2 0 1 1 79.55 71.42 4 0.0047986 93848 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 21.472 15.678 16099000 16099000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46087 2215 41321 386517 304853;304854 304854 2 SESLDPDSSMDTTLILK Unmodified 1850.8819 0.88192486 2759 Q5SW79 CEP170 Centrosomal protein of 170 kDa yes yes 0 0 0 By MS/MS 10 0 1 1 81.058 81.168 2 0.0086353 93026 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 38.634 18.427 5084200 0 0 0 0 0 0 0 0 0 0 0 0 0 5084200 0 46088 2759 41322 386518 304855 304855 1 SESLESPR Unmodified 903.42977 0.42977497 3693 Q92974 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 15.847 16.035 2 0.020846 16068 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 62.464 28.461 31346000 0 0 0 0 0 3057900 3351200 0 0 4774800 9071400 0 5934300 5156000 0 46089 3693 41323 386519;386520;386521;386522;386523;386524 304856;304857 304857 2 SESLESPRGER Unmodified 1245.5949 0.59494282 3693 Q92974 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 13.958 14.121 2;3 4.2587E-05 13541 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 96.229 83.653 1036300000 0 0 0 45009000 68698000 57991000 70063000 59656000 45715000 103760000 151980000 91651000 106900000 91337000 143540000 46090 3693 41324 386525;386526;386527;386528;386529;386530;386531;386532;386533;386534;386535;386536;386537;386538;386539;386540;386541;386542;386543;386544;386545;386546;386547;386548 304858;304859;304860;304861;304862;304863;304864;304865;304866;304867;304868;304869;304870;304871 304861 9 SESLVVCDVAEDLVEK Acetyl (Protein N-term) 1832.8714 0.87136018 1823 P60983 GMFB Glia maturation factor beta yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 4.67 3.82 1 2 1 2 2 2 1 1 98.379 96.598 2 3.5832E-132 91472 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 229.54 205.56 333480000 144090000 184180000 0 0 0 0 0 0 0 0 0 1931700 0 0 3270900 46091 1823 41325 386549;386550;386551;386552;386553;386554 304872;304873;304874;304875;304876;304877 304875 6 SESLVVCDVAEDLVEK Unmodified 1790.8608 0.86079549 1823 P60983 GMFB Glia maturation factor beta yes yes 0 0 0 By MS/MS 2 0 1 1 91.639 83.509 2 0.011007 108340 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.252 49.062 5643100 5643100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46092 1823 41325 386555 304878 304878 1 SESNRFPLPFPFPSK Unmodified 1748.8886 0.88860564 3996 Q96SY0 VWA9 von Willebrand factor A domain-containing protein 9 yes yes 0 0 1 By MS/MS 10 0 1 1 88.288 88.438 3 0.0075682 102219 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.092 32.543 4560000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4560000 46093 3996 41326 386556 304879 304879 1 SESPCESPYPNEK Unmodified 1522.6246 0.62458797 3465 Q8NI27 THOC2 THO complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 26.791 26.981 2 4.9249E-09 28655 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 111.86 94.83 59052000 0 0 0 4462200 4015200 5299300 5369600 2569700 5307400 0 7719300 7925800 0 8224200 8159600 46094 3465 41327 386557;386558;386559;386560;386561;386562;386563;386564;386565;386566 304880;304881;304882;304883;304884;304885;304886;304887;304888;304889 304884 10 SESPDEANVGK Unmodified 1131.5044 0.50439648 3449 Q8NFQ8 TOR1AIP2 Torsin-1A-interacting protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.025 13.18 2 0.0031312 12664 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 64.654 41.873 29908000 0 0 0 1648200 1855000 2187600 2544400 1818000 2454100 3661700 2745800 3077100 3048100 2470400 2398000 46095 3449 41328 386567;386568;386569;386570;386571;386572;386573;386574;386575;386576;386577;386578 304890;304891;304892;304893;304894;304895 304894 6 SESPKEPEQLRK Unmodified 1426.7416 0.74160705 891 P09651 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15.486 14.898 3 5.4401E-05 19651 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 91.313 79.605 911930000 73649000 24296000 272320000 38206000 35275000 5858300 43975000 34340000 9469000 34351000 85524000 70925000 31780000 53351000 98612000 46096 891 41329 386579;386580;386581;386582;386583;386584;386585;386586;386587;386588;386589;386590;386591;386592;386593 304896;304897;304898;304899;304900;304901;304902;304903;304904;304905 304902 5 SESPQKEDGLSSQLK Unmodified 1631.8002 0.80024414 3999 Q96T58 SPEN Msx2-interacting protein yes yes 0 0 1 By MS/MS 10 0 1 1 27.14 27.277 3 0.0091698 29165 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 40.278 18.611 2718900 0 0 0 0 0 0 0 0 2718900 0 0 0 0 0 0 46097 3999 41330 386594 304906 304906 0 SESQCRVVVLMGSTSDLGHCEK Oxidation (M) 2494.125 0.12504223 1135 P22234 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 56.479 50.427 4 3.8942E-13 68604 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 92.792 91.262 36544000 25315000 0 11229000 0 0 0 0 0 0 0 0 0 0 0 0 46098 1135 41331 386595;386596 304907;304908 304907 1628 2 SESRQERYEIEETETVTK Unmodified 2213.0448 0.044784526 2117 Q05682 CALD1 Caldesmon yes yes 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 43.659 38.329 3 0.014858 52817 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.131 26.083 26611000 16666000 0 9944700 0 0 0 0 0 0 0 0 0 0 0 0 46099 2117 41332 386597;386598 304909;304910 304909 2 SESSDFEVVPK Unmodified 1222.5717 0.57174776 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 0 By MS/MS 10 0 1 1 51.053 50.523 2 0.014628 57571 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 45.368 33.654 9033700 0 0 0 0 9033700 0 0 0 0 0 0 0 0 0 0 46100 5216 41333 386599 304911 304911 1 SESTNHEQQSPQSGK Unmodified 1642.7183 0.71830543 1420 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 yes yes 0 0 0 By MS/MS 2.5 0.5 2 2 4 5.7629 2.4621 2;3 0 4505 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 387.8 342.78 220280000 0 220280000 0 0 0 0 0 0 0 0 0 0 0 0 0 46101 1420 41334 386600;386601;386602;386603 304912;304913 304912 2 SESVEGFLSPSR Unmodified 1293.6201 0.62009493 2164 Q08AD1 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.49 65.578 2 1.0415E-05 75213 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 129.85 111.41 84770000 0 0 0 4756100 5461200 8267900 5224400 5191800 5184700 8796200 8434900 7975800 8797600 8029300 8650600 46102 2164 41335 386604;386605;386606;386607;386608;386609;386610;386611;386612;386613;386614;386615 304914;304915;304916;304917;304918;304919;304920;304921;304922;304923;304924;304925;304926;304927 304920 13 SESVPPVTDWAWYK Unmodified 1663.7882 0.7882229 1362 P35613 BSG Basigin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 86.298 85.508 2 0.00036897 98313 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 74.841 61.178 112410000 0 77793000 0 0 0 0 0 3135800 0 3791000 5225700 5035100 2128400 4329200 10973000 46103 1362 41336 386616;386617;386618;386619;386620;386621;386622;386623;386624 304928;304929;304930;304931;304932;304933;304934;304935 304933 8 SETACEDRSNAESLDR Unmodified 1838.7701 0.770083 4710 Q9NWZ5 UCKL1 Uridine-cytidine kinase-like 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 19.658 19.925 3 0.015396 20386 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 31.089 20.604 22814000 0 0 0 0 0 2423000 1742000 0 1749100 2398900 0 5094800 2794100 3055300 3556400 46104 4710 41337 386625;386626;386627;386628;386629;386630;386631;386632 304936;304937;304938 304938 3 SETAPAAPAAAPPAEK Acetyl (Protein N-term) 1519.7518 0.75183739 1038 P16403 HIST1H1C Histone H1.2 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 45.235 44.818 2 3.9866E-15 50510 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 98.156 16.531 696260000 11768000 0 0 38477000 42533000 33523000 37900000 33552000 30370000 55844000 82335000 91522000 86179000 60795000 91458000 46105 1038 41338 386633;386634;386635;386636;386637;386638;386639;386640;386641;386642;386643;386644;386645 304939;304940;304941;304942;304943;304944;304945;304946;304947;304948;304949;304950;304951;304952 304941 14 SETAPAAPAAPAPAEK Unmodified 1477.7413 0.7412727 920 P10412 HIST1H1E Histone H1.4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 35.173 35.478 2 3.7513E-10 39187 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 91.858 0 49404000 0 0 0 0 2919300 0 0 2910000 0 3838300 5184700 8075700 8203000 7840100 10433000 46106 920 41339 386646;386647;386648;386649;386650;386651;386652;386653 304953;304954;304955;304956;304957;304958;304959;304960 304958 8 SETAPAETATPAPVEK Unmodified 1597.7835 0.78353145 1037 P16401 HIST1H1B Histone H1.5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 35.378 35.833 2 3.6894E-10 38425 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.961 76.817 33549000 0 0 0 0 0 0 0 0 0 4308400 4355300 6312600 5958200 6049900 6564800 46107 1037 41340 386654;386655;386656;386657;386658;386659;386660;386661;386662 304961;304962;304963;304964;304965;304966;304967;304968;304969 304963 9 SETAPAETATPAPVEK Acetyl (Protein N-term) 1639.7941 0.79409613 1037 P16401 HIST1H1B Histone H1.5 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.528 47.691 2 0.000104 52733 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.216 87.216 383090000 0 0 0 29032000 21587000 20068000 16740000 16753000 12582000 41159000 30773000 44624000 47181000 37850000 64740000 46108 1037 41340 386663;386664;386665;386666;386667;386668;386669;386670;386671;386672;386673;386674 304970;304971;304972;304973;304974;304975;304976;304977;304978 304972 7 SETAPDSYK Unmodified 996.44001 0.4400053 2398 Q14244 MAP7 Ensconsin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.803 13.966 2 0.0030483 13490 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 91.318 60.029 115010000 0 0 0 7277600 9042400 8301700 9250400 5968000 5447900 12919000 12206000 14508000 9698600 8890200 11501000 46109 2398 41341 386675;386676;386677;386678;386679;386680;386681;386682;386683;386684;386685;386686 304979;304980;304981;304982;304983;304984;304985;304986;304987;304988;304989;304990;304991 304989 13 SETCNEDLAGTTDEK Unmodified 1668.6785 0.67847403 2567 Q15723 ELF2 ETS-related transcription factor Elf-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.208 24.413 2 7.7434E-27 26222 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 130.01 103.96 87322000 0 0 0 5253000 6005000 10371000 5789000 5528300 5850000 7156000 8224200 8629600 9016100 5824700 9674800 46110 2567 41342 386687;386688;386689;386690;386691;386692;386693;386694;386695;386696;386697;386698 304992;304993;304994;304995;304996;304997;304998;304999;305000;305001;305002;305003 304992 12 SETCSVEIPELEFELGMAVLGGK Unmodified 2494.1971 0.19712777 477 O75312 ZPR1 Zinc finger protein ZPR1 yes yes 0 0 0 By MS/MS 2 0 1 1 102.08 93.945 3 0.00066293 120877 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.178 43.08 8146000 8146000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46111 477 41343 386699 305004 305004 1 SETDLLDIR Unmodified 1060.5401 0.5400537 1643 P50995 ANXA11 Annexin A11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 67.929 67.979 2 0.0077155 78238 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 71.692 51.989 107190000 0 0 0 11606000 4290500 9510900 5712600 6353400 4924500 14392000 10563000 0 11478000 12362000 16002000 46112 1643 41344 386700;386701;386702;386703;386704;386705;386706;386707;386708;386709;386710 305005;305006;305007;305008;305009;305010;305011;305012;305013;305014 305005 10 SETDLLDIRSEYK Unmodified 1567.773 0.77296676 1643 P50995 ANXA11 Annexin A11 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 67.476 67.503 3 0.0003843 76690 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.527 73.136 60276000 0 0 0 5038900 0 9756700 0 0 0 9782400 0 0 0 8500900 27197000 46113 1643 41345 386711;386712;386713;386714;386715;386716;386717 305015;305016;305017;305018;305019;305020;305021 305017 7 SETDTSLIR Unmodified 1020.5088 0.50875357 1410 P40227 CCT6A T-complex protein 1 subunit zeta yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33.427 32.995 2 7.5997E-29 36742 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 183.26 101.47 2293200000 0 98398000 1546400 97928000 83249000 161080000 126880000 124570000 87442000 209730000 282120000 297120000 178800000 171880000 372430000 46114 1410 41346 386718;386719;386720;386721;386722;386723;386724;386725;386726;386727;386728;386729;386730;386731 305022;305023;305024;305025;305026;305027;305028;305029;305030;305031;305032;305033;305034;305035;305036;305037;305038 305036 16 SETEEMGDEEVFSWLK Oxidation (M) 1930.8142 0.81423923 3061 Q7LBC6 KDM3B Lysine-specific demethylase 3B yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 86.726 86.87 2 1.9163E-27 100427 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 126.76 118.04 19101000 0 0 0 0 0 0 0 0 0 7023500 4387100 0 0 2179400 5510600 46115 3061 41347 386732;386733;386734;386735;386736 305039;305040;305041;305042;305043 305040 4684 5 SETHGSLEEAMLTVVK Unmodified 1729.8557 0.85565053 2812 Q5VT79;P13928 ANXA8L2;ANXA8 Annexin A8-like protein 2;Annexin A8 yes no 0 0 0 By MS/MS By MS/MS 2 0 3 1 2 86.271 79.818 2;3 3.43E-18 101135 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.52 98.669 123760000 10908000 112860000 0 0 0 0 0 0 0 0 0 0 0 0 0 46116 2812 41348 386737;386738;386739 305044;305045;305046 305045 3 SETHGSLEEAMLTVVK Oxidation (M) 1745.8506 0.85056516 2812 Q5VT79;P13928 ANXA8L2;ANXA8 Annexin A8-like protein 2;Annexin A8 yes no 0 1 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 60.057 55.755 3 1.3668E-08 69301 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 106.42 91.037 21851000 0 2615200 19236000 0 0 0 0 0 0 0 0 0 0 0 0 46117 2812 41348 386740;386741 305047;305048;305049 305049 4448 3 SETIQDTDTQSLVGSPSTR Unmodified 2020.9549 0.95490689 4778 Q9NZN5 ARHGEF12 Rho guanine nucleotide exchange factor 12 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 54.234 54.424 2 9.0498E-12 61732 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 110.29 101.78 24077000 0 0 0 0 0 3277100 3566100 0 2658400 4890500 3669300 0 2988500 3027300 0 46118 4778 41349 386742;386743;386744;386745;386746;386747;386748 305050;305051;305052 305051 3 SETITADVNHNLK Unmodified 1440.7209 0.72087161 2599 Q16222 UAP1 UDP-N-acetylhexosamine pyrophosphorylase;UDP-N-acetylgalactosamine pyrophosphorylase;UDP-N-acetylglucosamine pyrophosphorylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 3.25 2.59 5 2 1 4 3 1 42.28 38.499 2;3 4.6644E-22 49792 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 157.75 146.15 427660000 0 399320000 22732000 0 0 0 0 0 0 0 0 0 0 0 5608900 46119 2599 41350 386749;386750;386751;386752;386753;386754;386755;386756 305053;305054;305055;305056;305057;305058;305059 305053 6 SETPQNSPLPSSPIVPMSK Unmodified 1994.9983 0.99829203 1406 P39880 CUX1 Homeobox protein cut-like 1 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 75.963 76.063 2 0.00014356 87432 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.91 52.659 38121000 0 0 0 0 3480500 3016700 0 3440700 0 3828900 4698900 3915300 3695100 3259700 8785000 46120 1406 41351 386757;386758;386759;386760;386761;386762;386763;386764;386765 305060 305060 1 SETPQNSPLPSSPIVPMSK Oxidation (M) 2010.9932 0.99320665 1406 P39880 CUX1 Homeobox protein cut-like 1 yes yes 0 1 0 By matching By MS/MS By MS/MS By matching By matching 10 0 5 1 1 1 1 1 67.792 68.1 2 7.8891E-05 78200 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 59.185 46.916 22184000 0 0 0 0 0 0 0 0 0 4809400 4776400 5644900 0 2932000 4021200 46121 1406 41351 386766;386767;386768;386769;386770 305061 305061 2195 1 SETREHMPTLEEFFEEAIEQADPENMVENEYK Oxidation (M) 3886.6826 0.68257971 3839 Q96FV9 THOC1 THO complex subunit 1 yes yes 0 1 1 By MS/MS 2 0 1 1 100.61 92.475 4 1.92E-10 119134 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.268 47.78 7967300 7967300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46122 3839 41352 386771 305062 305062 5359 1 SETREHMPTLEEFFEEAIEQADPENMVENEYK Unmodified 3870.6877 0.68766509 3839 Q96FV9 THOC1 THO complex subunit 1 yes yes 0 0 1 By MS/MS 2 0 1 1 101.56 93.433 4 1.1279E-05 120278 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.463 38.738 9122500 9122500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46123 3839 41352 386772 305063;305064 305063 2 SETSGPQIK Unmodified 945.47673 0.47672516 5087 Q9Y266 NUDC Nuclear migration protein nudC yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.98 1 3 7 1 2 1 1 1 1 1 1 1 1 23.261 22.572 2 0.0051444 13909 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 82.241 43.434 1012900000 73036000 521130000 4876100 0 0 65452000 36627000 0 27715000 74823000 89595000 54281000 0 65348000 0 46124 5087 41353 386773;386774;386775;386776;386777;386778;386779;386780;386781;386782;386783 305065;305066;305067;305068;305069;305070;305071;305072;305073;305074 305065 9 SETSGSFEDALLAIVK Unmodified 1665.8461 0.84613171 887 P09525 ANXA4 Annexin A4 yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 98.672 94.705 2 3.388E-40 116600 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 176.42 162.62 146500000 0 143300000 3196900 0 0 0 0 0 0 0 0 0 0 0 0 46125 887 41354 386784;386785;386786 305075;305076 305075 2 SETSWESPK Unmodified 1049.4666 0.46655441 3147 Q86UE4 MTDH Protein LYRIC yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 25.723 25.226 2 0.0074003 31663 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.605 73.219 58584000 0 41719000 0 0 0 0 0 0 0 0 3358700 0 3476500 3703600 6326400 46126 3147 41355 386787;386788;386789;386790;386791 305077;305078;305079;305080;305081 305078 5 SETVICSSR Acetyl (Protein N-term) 1079.4917 0.4917233 1629 P50552 VASP Vasodilator-stimulated phosphoprotein yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 38.908 38.35 2 0.0011015 43054 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 123.16 91.852 147990000 3706200 0 0 13873000 0 22288000 0 0 11868000 15271000 20133000 0 13081000 22332000 25442000 46127 1629 41356 386792;386793;386794;386795;386796;386797;386798;386799;386800 305082;305083;305084;305085;305086;305087;305088;305089;305090 305089 9 SETVICSSRATVMLYDDGNK Acetyl (Protein N-term) 2287.046 0.046046854 1629 P50552 VASP Vasodilator-stimulated phosphoprotein yes yes 1 0 1 By MS/MS 2 0 1 1 83.379 75.249 3 4.639E-38 98405 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 124.26 101.62 12366000 12366000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46128 1629 41357 386801 305091 305091 1 SETYVNGK Unmodified 896.42396 0.42396131 396 O60333 KIF1B Kinesin-like protein KIF1B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.166 12.314 2 0.012524 11472 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 74.439 23.473 70134000 0 0 0 5730500 5344900 7224100 5801400 5640100 5292500 6642600 7353200 6433900 5428400 4182700 5060000 46129 396 41358 386802;386803;386804;386805;386806;386807;386808;386809;386810;386811;386812;386813 305092;305093 305092 2 SEVASGLQSATHPPGGTEPPRPR Unmodified 2327.1618 0.16182039 3575 Q8WWL2 SPIRE2 Protein spire homolog 2 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 46.577 46.688 4 0.00019035 52591 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 39.647 35.097 36729000 0 0 0 0 3667600 2346600 5223200 3643700 0 0 7740900 0 8458000 5649200 0 46130 3575 41359 386814;386815;386816;386817;386818;386819;386820 305094;305095;305096;305097 305097 4 SEVATLTAAGK Unmodified 1046.5608 0.56078914 1374 P36542 ATP5C1 ATP synthase subunit gamma, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 34.307 34.575 2 0.0075702 38193 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 82.749 55.225 52833000 0 0 0 0 0 0 5569900 6367600 4387200 8527300 0 13551000 8422300 6008200 0 46131 1374 41360 386821;386822;386823;386824;386825;386826;386827 305098;305099;305100;305101;305102;305103 305101 5 SEVDMLK Unmodified 820.40005 0.40005474 840 P07355;A6NMY6 ANXA2;ANXA2P2 Annexin A2;Putative annexin A2-like protein yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.123 35.304 2 0.030787 38746 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 74.415 35.197 430260000 0 0 0 80285000 15991000 20222000 18270000 44355000 12233000 28106000 43840000 40841000 39597000 36318000 50197000 46132 840 41361 386828;386829;386830;386831;386832;386833;386834;386835;386836;386837;386838;386839 305104;305105;305106;305107;305108;305109;305110;305111 305106 8 SEVELLEMEK Oxidation (M) 1221.5799 0.5798696 2376 Q14149 MORC3 MORC family CW-type zinc finger protein 3 yes yes 0 1 0 By MS/MS 2 0 1 1 59.118 53.275 2 0.016848 68578 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.157 38.464 23673000 0 23673000 0 0 0 0 0 0 0 0 0 0 0 0 0 46133 2376 41362 386840 305112 305112 3861 1 SEVERPASIPLSSGYSTASSDSTPR Unmodified 2580.2304 0.23035346 4291 Q9C0F1 CEP44 Centrosomal protein of 44 kDa yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 2 1 1 1 1 1 1 1 61.018 61.113 3 9.0113E-19 69782 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 75.326 70.877 67219000 0 0 0 2938000 4005000 4527000 4919100 0 2650900 7138200 6527700 9880300 9308400 6308600 9016000 46134 4291 41363 386841;386842;386843;386844;386845;386846;386847;386848;386849;386850;386851;386852;386853 305113;305114;305115;305116;305117;305118;305119;305120;305121;305122;305123;305124;305125;305126;305127 305113 14 SEVIEDSDVETVSEK Unmodified 1664.7629 0.76285559 2713 Q56NI9 ESCO2 N-acetyltransferase ESCO2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 48.157 48.332 2 1.676E-14 54184 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 130.56 120.68 45331000 0 0 0 0 2876900 3445300 0 0 0 10292000 11713000 17005000 0 0 0 46135 2713 41364 386854;386855;386856;386857;386858 305128;305129;305130;305131 305130 4 SEVLNIDNPDLAK Unmodified 1426.7304 0.73037367 13 A2RUC4 TYW5 tRNA wybutosine-synthesizing protein 5 yes yes 0 0 0 By MS/MS 2 0 1 1 72.571 66.844 2 0.00089667 84826 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.24 86.656 28070000 0 28070000 0 0 0 0 0 0 0 0 0 0 0 0 0 46136 13 41365 386859 305132 305132 1 SEVLQESIR Unmodified 1059.556 0.55603811 3892 Q96JG6 CCDC132 Coiled-coil domain-containing protein 132 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 38.738 38.732 2 0.040202 43071 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 44.447 4.3439 12375000 0 0 0 0 1903400 0 0 5429300 0 0 0 0 0 5041900 0 46137 3892 41366 386860;386861;386862 305133 305133 1 SEVLQESIRK Unmodified 1187.651 0.65100113 3892 Q96JG6 CCDC132 Coiled-coil domain-containing protein 132 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 30.246 29.512 3 0.0097722 38309 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 70.908 51.301 97257000 0 16337000 24640000 0 4144100 0 0 6135000 8732500 9457800 8269800 0 0 5950600 13590000 46138 3892 41367 386863;386864;386865;386866;386867;386868;386869;386870;386871 305134;305135;305136;305137;305138;305139 305137 5 SEVLRVTHELQAMK Unmodified 1639.8716 0.87157537 1066 P17980 PSMC3 26S protease regulatory subunit 6A yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 72.366 65.404 3 0.0071959 83911 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 51.03 38.61 71138000 31978000 39160000 0 0 0 0 0 0 0 0 0 0 0 0 0 46139 1066 41368 386872;386873 305140;305141 305140 1 SEVLRVTHELQAMK Oxidation (M) 1655.8665 0.86648999 1066 P17980 PSMC3 26S protease regulatory subunit 6A yes yes 0 1 1 By MS/MS By MS/MS 2.67 0.471 1 2 2 1 54.529 48.369 3 3.5977E-05 66896 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 99.481 95.845 281410000 277460000 3955500 0 0 0 0 0 0 0 0 0 0 0 0 0 46140 1066 41368 386874;386875;386876 305142;305143 305143 1509 1 SEVLSESSELLQQELEELRK Unmodified 2345.1962 0.19619979 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 1 By MS/MS 2 0 1 1 96.966 88.835 3 9.956E-09 114762 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.213 79.751 18014000 18014000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46141 2556 41369 386877 305144 305144 1 SEVMEETKEWK Oxidation (M) 1410.6337 0.63369609 3889 Q96JA4 MS4A14 Membrane-spanning 4-domains subfamily A member 14 yes yes 0 1 1 By MS/MS 10 0 1 1 47.101 47.541 2 0.006356 53379 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 93.374 42.028 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46142 3889 41370 386878 305145 305145 5391 1 SEVNLAQR Unmodified 915.47739 0.47739386 2699 Q53F19 C17orf85 Uncharacterized protein C17orf85 yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.557 22.763 2 0.0082464 23280 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 86.866 36.74 67985000 0 0 0 4952700 3560300 3666200 5437100 2568200 3884600 6095600 8338400 9224000 6932000 5891900 7434200 46143 2699 41371 386879;386880;386881;386882;386883;386884;386885;386886;386887;386888;386889;386890 305146;305147;305148;305149;305150;305151;305152 305148 7 SEVPEDLAGFIELFQTPSHTK Unmodified 2344.1587 0.15869207 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 0 By MS/MS 2 0 1 1 100.16 92.026 3 0.002483 118632 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 37.825 29.116 4723000 4723000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46144 1492 41372 386891 305153 305153 1 SEVPLVDVTK Unmodified 1085.5968 0.5968403 367 O43795 MYO1B Unconventional myosin-Ib yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 60.931 60.847 2 0.021168 69852 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 46.819 30.043 68676000 0 0 0 8589500 11314000 10243000 10614000 10113000 8113700 9689700 0 0 0 0 0 46145 367 41373 386892;386893;386894;386895;386896;386897;386898 305154;305155;305156;305157;305158;305159 305159 6 SEVQAIIESTPELDMDK Unmodified 1903.9085 0.90847397 391 O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.29 0.452 5 2 1 4 2 86.986 82.826 2;3 5.0736E-06 103342 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.422 63.88 282830000 5557600 274120000 3157300 0 0 0 0 0 0 0 0 0 0 0 0 46146 391 41374 386899;386900;386901;386902;386903;386904;386905 305160;305161;305162;305163;305164;305165 305161 6 SEVQFGLQPSGPLPLR Unmodified 1723.9257 0.92571943 3003 Q6ZNF0 PAPL Iron/zinc purple acid phosphatase-like protein yes yes 0 0 0 By MS/MS 10 0 1 1 84.905 84.521 2 0.00018994 98254 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 66.262 51.572 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46147 3003 41375 386906 305166 305166 1 SEVQLWLLK Unmodified 1114.6386 0.63864553 3463 Q8NI08 NCOA7 Nuclear receptor coactivator 7 yes yes 0 0 0 By MS/MS 2 0 1 1 88.832 86.388 2 0.03281 104535 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 65.038 48.835 1284700 0 0 1284700 0 0 0 0 0 0 0 0 0 0 0 0 46148 3463 41376 386907 305167 305167 1 SEVQNLLPDTITEEEK Unmodified 1843.9051 0.90510315 3953 Q96Q15 SMG1 Serine/threonine-protein kinase SMG1 yes yes 0 0 0 By MS/MS 3 0 1 1 80.845 77.546 2 0.030855 92969 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 51.013 39.48 4496000 0 4496000 0 0 0 0 0 0 0 0 0 0 0 0 0 46149 3953 41377 386908 305168 305168 1 SEVQQPVHPK Unmodified 1147.5986 0.59857163 4893 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.72 1.37 1 24 1 2 2 2 2 2 2 2 2 2 2 2 2 13.441 13.446 2;3 0.0048432 12665 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 83.265 58.446 395720000 0 10845000 0 17000000 25912000 28169000 24187000 19012000 22834000 33130000 34837000 57323000 48497000 33652000 40324000 46150 4893 41378 386909;386910;386911;386912;386913;386914;386915;386916;386917;386918;386919;386920;386921;386922;386923;386924;386925;386926;386927;386928;386929;386930;386931;386932;386933 305169;305170;305171;305172;305173 305170 5 SEVREQINAK Unmodified 1172.6149 0.61494998 5077 Q9Y230 RUVBL2 RuvB-like 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.56 3.62 4 1 11 1 2 2 1 1 1 1 1 1 1 1 1 1 1 14.056 13.166 2;3 0.0095738 12543 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 41.164 20.386 1509500000 76209000 215710000 846740000 19154000 22665000 23777000 32149000 25281000 19105000 38443000 47947000 43040000 36674000 0 62578000 46151 5077 41379 386934;386935;386936;386937;386938;386939;386940;386941;386942;386943;386944;386945;386946;386947;386948;386949 305174;305175;305176;305177;305178;305179;305180;305181;305182;305183;305184 305175 8 SEVTELR Unmodified 832.42905 0.42904669 70 CON__P08779;P08779 KRT16 Keratin, type I cytoskeletal 16 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 2 1 22.801 22.983 2 0.037306 24332 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 69.998 7.2812 + 248130000 0 0 0 44209000 7777600 6504300 14911000 21761000 6189400 0 11286000 16263000 105150000 14079000 0 46152 70 41380 386950;386951;386952;386953;386954;386955;386956;386957;386958;386959;386960 305185;305186;305187;305188;305189 305189 4 SEVTELRR Unmodified 988.53016 0.53015772 70 CON__P08779;P08779 KRT16 Keratin, type I cytoskeletal 16 yes no 0 0 1 By MS/MS 10 0 1 1 17.284 17.565 2 0.02623 17798 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 110.31 37.52 + 436900000 0 0 0 0 0 0 0 0 0 0 0 0 436900000 0 0 46153 70 41381 386961 305190 305190 0 SEVVESTTESQDK Unmodified 1437.6471 0.64709755 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 15.751 15.892 2 1.1689E-12 14424 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 127.42 107.64 37870000 0 0 0 5169800 1727100 3623700 3388000 0 1761800 3997500 4514300 0 4549900 4981600 4156300 46154 2804 41382 386962;386963;386964;386965;386966;386967;386968;386969;386970;386971;386972 305191;305192;305193;305194;305195;305196;305197;305198;305199;305200 305197 10 SEWETLSR Unmodified 1006.472 0.47197413 3255 Q8IX12 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.945 44.119 2 0.011329 49115 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 120.49 87.131 320210000 0 0 0 15949000 15568000 23839000 21630000 25064000 14315000 26357000 27450000 33015000 26665000 19009000 71354000 46155 3255 41383 386973;386974;386975;386976;386977;386978;386979;386980;386981;386982;386983;386984 305201;305202;305203;305204;305205 305203 4 SEWMNHINK Unmodified 1157.5288 0.52877751 4456 Q9H8W4 PLEKHF2 Pleckstrin homology domain-containing family F member 2 yes yes 0 0 0 By MS/MS By matching By MS/MS 2 0 3 1 1 1 40.278 35.186 3 0.035995 48774 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.91 51.553 27199000 18003000 7390800 1805100 0 0 0 0 0 0 0 0 0 0 0 0 46156 4456 41384 386985;386986;386987 305206 305206 0 SEWNTVER Unmodified 1019.4672 0.46722311 167 O00541 PES1 Pescadillo homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.232 31.422 2 0.0061172 33904 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 119.29 50.376 558930000 0 0 0 34727000 42788000 49690000 43835000 37739000 39983000 54544000 46271000 44077000 53868000 37698000 73709000 46157 167 41385 386988;386989;386990;386991;386992;386993;386994;386995;386996;386997;386998;386999 305207;305208;305209;305210;305211;305212;305213;305214;305215;305216;305217;305218;305219 305217 10 SEWNTVERLK Unmodified 1260.6463 0.64625011 167 O00541 PES1 Pescadillo homolog yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 56.282 49.284 2 6.0133E-05 67174 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 152.06 136.91 52393000 24529000 27864000 0 0 0 0 0 0 0 0 0 0 0 0 0 46158 167 41386 387000;387001 305220 305220 1 SEWSDLLSDLQK Unmodified 1419.6882 0.6881745 861 P08237 PFKM ATP-dependent 6-phosphofructokinase, muscle type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 91.155 91.291 2 0.00024247 105917 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.943 71.828 11482000 0 0 0 0 0 0 0 0 0 2330200 1567500 1617500 0 1021700 4944700 46159 861 41387 387002;387003;387004;387005;387006 305221;305222 305222 2 SEYDRGVNTFSPEGR Unmodified 1712.7754 0.77542638 1228 P28066 PSMA5 Proteasome subunit alpha type-5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 2 1 1 2 1 1 2 2 1 2 1 2 43.549 43.734 2;3 3.0569E-17 47836 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 105.65 67.015 680830000 0 0 0 27976000 12969000 37792000 21701000 19235000 15267000 50735000 93446000 57261000 68059000 52263000 224130000 46160 1228 41388 387007;387008;387009;387010;387011;387012;387013;387014;387015;387016;387017;387018;387019;387020;387021;387022;387023;387024 305223;305224;305225;305226;305227;305228;305229;305230;305231;305232;305233;305234;305235;305236 305226 14 SEYIETASGNK Unmodified 1197.5513 0.55134667 4142 Q9BTE1 DCTN5 Dynactin subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.438 22.677 2 0.00035286 23265 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 97.565 75.074 45116000 0 0 0 0 1399800 3167800 2574500 2215900 1614600 3508700 7775600 7757700 2788000 4862300 7451400 46161 4142 41389 387025;387026;387027;387028;387029;387030;387031;387032;387033;387034;387035;387036 305237;305238;305239;305240;305241;305242;305243;305244;305245;305246;305247;305248;305249 305246 13 SEYLEVK Unmodified 866.43855 0.43854874 895 P09884 POLA1 DNA polymerase alpha catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching 10 0 5 1 1 1 1 1 34.335 34.751 2 0.02336 38059 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 89.369 5.9923 365010000 0 0 0 0 0 40178000 0 0 0 56437000 64219000 57922000 0 0 146250000 46162 895 41390 387037;387038;387039;387040;387041 305250;305251;305252 305251 3 SEYNDQLTR Unmodified 1124.5098 0.5098162 1169 P23786 CPT2 Carnitine O-palmitoyltransferase 2, mitochondrial yes yes 0 0 0 By MS/MS By matching By MS/MS By matching 10 0 4 1 1 1 1 24.303 24.422 2 0.013737 25372 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 59.35 35.147 9695300 0 0 0 2052500 3054500 0 0 0 0 0 0 2544200 0 2044200 0 46163 1169 41391 387042;387043;387044;387045 305253 305253 1 SEYSELDEDESQAPYDPNGKPER Unmodified 2654.1256 0.12561362 1086 P19387 POLR2C DNA-directed RNA polymerase II subunit RPB3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 53.175 52.939 3 3.5399E-05 59556 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.095 49.333 11940000 0 0 0 2607400 3362800 0 3494500 2475700 0 0 0 0 0 0 0 46164 1086 41392 387046;387047;387048;387049;387050 305254;305255;305256;305257;305258 305256 5 SEYSSYPDINFNR Unmodified 1590.6951 0.69505079 3179 Q86W56 PARG Poly(ADP-ribose) glycohydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 2 1 1 1 68.529 68.79 2 0.0086485 78449 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.5 61.827 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46165 3179 41393 387051;387052;387053;387054;387055 305259;305260;305261;305262;305263 305262 5 SEYSVHSSLASK Unmodified 1293.6201 0.62009493 354 O43683 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 26.307 26.006 2;3 0.00034929 32870 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 94.363 76.138 47110000 0 0 6393000 0 3561200 4406500 5317100 0 4447400 6954900 8694900 0 0 7334800 0 46166 354 41394 387056;387057;387058;387059;387060;387061;387062;387063 305264;305265;305266 305266 3 SEYTQPTPIQCQGVPVALSGR Unmodified 2287.1267 0.12668044 3199 Q86XP3 DDX42 ATP-dependent RNA helicase DDX42 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 75.802 75.92 3 0.011056 86807 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 25.619 16.057 101150000 0 0 0 0 9081900 0 10396000 10892000 0 11144000 9826500 10412000 11039000 10084000 18272000 46167 3199 41395 387064;387065;387066;387067;387068;387069;387070;387071;387072 305267;305268 305268 2 SEYTYGASYR Unmodified 1195.5146 0.51456723 402 O60479 DLX3 Homeobox protein DLX-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 34.029 34.233 2 0.040855 36624 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 48.423 40.083 59552000 0 0 0 3989600 4406400 0 3761800 0 4334600 5327000 7526000 6822900 6936900 5448100 10999000 46168 402 41396 387073;387074;387075;387076;387077;387078;387079;387080;387081;387082 305269 305269 1 SFADINLYR Unmodified 1097.5506 0.55055881 744 P01111 NRAS GTPase NRas yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.656 72.725 2 0.006387 82816 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 75.213 43.278 62216000 0 0 0 2647400 3600200 4749200 2774600 4257000 3717900 6649900 3897800 9533000 4686400 5570000 10133000 46169 744 41397 387083;387084;387085;387086;387087;387088;387089;387090;387091;387092;387093;387094 305270;305271;305272;305273;305274;305275;305276;305277;305278;305279;305280;305281 305277 12 SFADINLYREQIK Unmodified 1595.8308 0.83075641 744 P01111 NRAS GTPase NRas yes yes 0 0 1 By MS/MS 2 0 1 1 80.379 72.249 3 0.001721 94755 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.265 52.158 22085000 22085000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46170 744 41398 387095 305282 305282 1 SFAEGQTSINK Unmodified 1180.5724 0.57241646 4259 Q9BZ95 WHSC1L1 Histone-lysine N-methyltransferase NSD3 yes yes 0 0 0 By MS/MS 2 0 1 1 32.724 28.189 2 0.024752 36847 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.557 43.468 8408700 0 8408700 0 0 0 0 0 0 0 0 0 0 0 0 0 46171 4259 41399 387096 305283 305283 1 SFAESSSLTK Unmodified 1055.5135 0.5135046 41 Q9H707;B7Z6K7 ZNF552;ZNF814 Zinc finger protein 552;Putative uncharacterized zinc finger protein 814 yes no 0 0 0 By MS/MS 2 0 1 1 35.863 31.016 2 0.019871 40540 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.841 39.918 23539000 0 23539000 0 0 0 0 0 0 0 0 0 0 0 0 0 46172 41 41400 387097 305284 305284 1 SFAGAVSPQEEEEFRR Unmodified 1837.8595 0.85949036 1333 P33992 MCM5 DNA replication licensing factor MCM5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 1 2 1 2 1 2 1 1 1 1 2 56.085 56.242 2;3 3.4583E-14 63223 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 99.283 85.474 475530000 0 0 0 19891000 14428000 47525000 23193000 23138000 15601000 45888000 47108000 50364000 31838000 37924000 118640000 46173 1333 41401 387098;387099;387100;387101;387102;387103;387104;387105;387106;387107;387108;387109;387110;387111;387112;387113 305285;305286;305287;305288;305289;305290;305291;305292;305293;305294 305288 9 SFAGNLNTYK Unmodified 1113.5455 0.54547343 2064 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.971 46.14 2 0.00090024 51752 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 116.3 82.301 857160000 0 0 0 40401000 49892000 73290000 69984000 65740000 48614000 76595000 78703000 116420000 85113000 56295000 96109000 46174 2064 41402 387114;387115;387116;387117;387118;387119;387120;387121;387122;387123;387124;387125 305295;305296;305297;305298;305299;305300;305301;305302;305303;305304;305305;305306 305301 12 SFAGNLNTYKR Unmodified 1269.6466 0.64658446 2064 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 38.047 38.263 2 0.0059637 41756 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.465 34.486 36925000 0 0 0 0 1932100 0 2350200 0 2017000 4123200 5313400 13202000 4873200 3114200 0 46175 2064 41403 387126;387127;387128;387129;387130;387131;387132;387133 305307;305308 305308 2 SFANEEGEAQK Unmodified 1208.5309 0.53094558 2098 Q03518 TAP1 Antigen peptide transporter 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 17.479 17.658 2 0.0012313 17250 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 74.173 41.563 32411000 0 0 0 2725800 2773300 3774700 2370100 2802400 1091000 2761300 2856200 5623600 0 3263900 2368900 46176 2098 41404 387134;387135;387136;387137;387138;387139;387140;387141;387142;387143;387144 305309;305310;305311;305312;305313;305314;305315;305316;305317;305318 305317 10 SFAQWDQLVAHK Unmodified 1428.715 0.71499837 4208 Q9BWE0 REPIN1 Replication initiator 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 1 1 2 75.411 75.47 2;3 0.0024753 86572 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.502 34.773 58699000 0 0 0 1895900 1727300 8617800 1864500 3095800 8556000 2838400 3427000 5741700 5372800 3564700 11998000 46177 4208 41405 387145;387146;387147;387148;387149;387150;387151;387152;387153;387154;387155;387156;387157 305319;305320;305321;305322;305323;305324;305325 305321 7 SFATASHR Unmodified 875.42496 0.42496436 4742 Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 7.1455 7.2479 2 0.011282 5206 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 77.282 43.544 19863000 0 0 0 0 5866000 0 0 5442000 0 0 0 4108700 0 4446400 0 46178 4742 41406 387158;387159;387160;387161 305326;305327;305328;305329;305330 305326 5 SFATASHRNTEEEGLK Unmodified 1775.8438 0.84384029 4742 Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 24.124 23.241 3 1.7127E-42 34414 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 144.18 133.72 254990000 196950000 0 4910200 0 3188200 0 5014500 7238600 5952500 8891700 0 0 11476000 11371000 0 46179 4742 41407 387162;387163;387164;387165;387166;387167;387168;387169;387170 305331;305332;305333;305334;305335 305333 5 SFATSASAR Unmodified 896.43519 0.4351947 2970 Q6T4R5 NHS Nance-Horan syndrome protein yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 16.117 16.353 2 0.048015 16156 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 42.599 16.12 31847000 0 0 0 0 1396900 0 2683700 1954000 2565000 0 3137700 4659700 4556500 3824800 7068300 46180 2970 41408 387171;387172;387173;387174;387175;387176;387177;387178;387179 305336 305336 1 SFAVGMFK Oxidation (M) 901.43677 0.4367746 1591 P49748 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.65 1.63 1 22 1 1 2 2 1 2 2 2 2 2 2 2 2 55.066 54.871 2 0.011855 63033 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 64.803 43.257 188300000 12360000 0 0 6166200 11199000 11655000 5950700 16643000 10096000 17641000 26762000 25503000 16991000 9161200 18174000 46181 1591 41409 387180;387181;387182;387183;387184;387185;387186;387187;387188;387189;387190;387191;387192;387193;387194;387195;387196;387197;387198;387199;387200;387201;387202 305337;305338;305339;305340;305341;305342;305343;305344;305345;305346;305347;305348;305349 305339 2561 13 SFAVGMFK Unmodified 885.44186 0.44185998 1591 P49748 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 71.229 70.676 2 0.018796 92982 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.029 64.057 146440000 25527000 0 0 0 5883200 7886800 5095100 10287000 7932000 11131000 19589000 12858000 9551500 9068100 21627000 46182 1591 41409 387203;387204;387205;387206;387207;387208;387209;387210;387211;387212;387213;387214 305350;305351;305352;305353;305354 305352 5 SFAVYAATATEK Unmodified 1257.6241 0.62411768 4456 Q9H8W4 PLEKHF2 Pleckstrin homology domain-containing family F member 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 60.622 54.575 2 0.0050207 68126 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 90.05 75.381 36245000 30407000 0 5837800 0 0 0 0 0 0 0 0 0 0 0 0 46183 4456 41410 387215;387216 305355;305356;305357;305358 305358 4 SFCEDLTEGK Unmodified 1184.502 0.50195363 685 O95749 GGPS1 Geranylgeranyl pyrophosphate synthase yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 48.827 43.559 2 0.004742 56595 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.177 54.914 116270000 0 116270000 0 0 0 0 0 0 0 0 0 0 0 0 0 46184 685 41411 387217;387218 305359 305359 1 SFCPGGTDSVSPPPSVITQENLGRVK Unmodified 2728.349 0.34902881 4287 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 79.879 74.499 3 7.52E-05 95735 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.055 43.285 31290000 18797000 0 12493000 0 0 0 0 0 0 0 0 0 0 0 0 46185 4287 41412 387219;387220 305360;305361 305360 1 SFCSMAGPNLIAIGSSESAQK Unmodified 2154.0085 0.0085391359 579 O94760 DDAH1 N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 87.309 80.84 2;3 1.7654E-05 102374 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 40.779 35.326 31725000 10504000 21220000 0 0 0 0 0 0 0 0 0 0 0 0 0 46186 579 41413 387221;387222;387223 305362;305363;305364 305362 3 SFCSMAGPNLIAIGSSESAQK Oxidation (M) 2170.0035 0.003453758 579 O94760 DDAH1 N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 yes yes 0 1 0 By MS/MS 2 0 1 1 82.127 73.997 3 0.0012433 96819 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 41.615 25.85 17399000 17399000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46187 579 41413 387224 305365 305365 738 1 SFDANGASTLSK Unmodified 1196.5673 0.56733108 4138 Q9BTA9 WAC WW domain-containing adapter protein with coiled-coil yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 35.249 34.721 2 1.6829E-09 43500 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.9 84.34 290890000 0 69089000 0 15700000 9849100 16863000 18131000 15822000 16566000 17349000 20689000 22921000 22868000 18316000 26731000 46188 4138 41414 387225;387226;387227;387228;387229;387230;387231;387232;387233;387234;387235;387236;387237;387238 305366;305367;305368;305369;305370;305371;305372;305373;305374;305375;305376;305377;305378;305379;305380 305370 14 SFDAVLEALSR Unmodified 1206.6245 0.62445203 2921 Q6P1N0 CC2D1A Coiled-coil and C2 domain-containing protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 89.447 89.588 2 0.00051485 103970 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 82.749 53.276 6071700 0 0 0 0 0 0 0 0 0 1398200 1024000 0 0 857010 2792500 46189 2921 41415 387239;387240;387241;387242 305381;305382;305383 305381 3 SFDAVVFDVLK Unmodified 1238.6547 0.65468953 3188 Q86X27 RALGPS2 Ras-specific guanine nucleotide-releasing factor RalGPS2 yes yes 0 0 0 By MS/MS 2 0 1 1 95.92 93.428 2 0.0056784 113138 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 102.61 82.279 609720 0 0 609720 0 0 0 0 0 0 0 0 0 0 0 0 46190 3188 41416 387243 305384 305384 0 SFDDEEIQK Unmodified 1109.4877 0.48768378 372 O43823 AKAP8 A-kinase anchor protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 32.16 32.321 2 0.013227 34754 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.118 17.204 69706000 0 0 0 6638700 7226900 4912500 3893600 5526600 3993400 5781600 0 7514300 5438400 4408800 14371000 46191 372 41417 387244;387245;387246;387247;387248;387249;387250;387251;387252;387253;387254 305385;305386;305387;305388;305389;305390;305391 305391 7 SFDDEESVDGNRPSSAASAFK Unmodified 2214.9665 0.9665342 456 O75122 CLASP2 CLIP-associating protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 52.786 52.743 3 1.4479E-05 58919 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 55.575 52.431 88180000 0 0 0 8856300 8683400 12708000 8808500 10928000 9784600 15986000 0 0 0 12424000 0 46192 456 41418 387255;387256;387257;387258;387259;387260;387261;387262 305392;305393;305394;305395;305396 305396 5 SFDDPIVQTER Unmodified 1305.6201 0.62009493 686 O95757 HSPA4L Heat shock 70 kDa protein 4L yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 56.655 56.864 2 0.0011462 63912 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 85.377 65.048 97303000 0 0 0 0 5066600 9353400 5768900 0 0 0 13777000 12976000 4897200 9111800 36352000 46193 686 41419 387263;387264;387265;387266;387267;387268;387269;387270;387271;387272 305397;305398;305399;305400;305401;305402;305403;305404;305405 305401 9 SFDFEIETK Unmodified 1114.5183 0.51825563 2163 Q08945 SSRP1 FACT complex subunit SSRP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 72.229 72.502 2 0.0036563 82802 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.355 75.636 17015000 0 0 0 0 0 0 0 0 0 0 5942400 0 0 4633600 6439000 46194 2163 41420 387273;387274;387275;387276;387277 305406;305407;305408;305409;305410 305406 5 SFDGNTLLNR Unmodified 1135.5622 0.56218613 2113 Q05209 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 55.009 54.962 2 0.00050563 61318 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 125.31 72.912 85067000 0 0 0 8014400 8693200 0 11579000 11494000 0 20936000 0 0 9763200 14588000 0 46195 2113 41421 387278;387279;387280;387281;387282;387283;387284 305411;305412;305413;305414;305415 305414 2 SFDHLISDTK Unmodified 1161.5666 0.5666028 1125 P21359 NF1 Neurofibromin;Neurofibromin truncated yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 22.942 23.108 3 0.017787 24243 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 35.541 14.169 8185100 0 0 0 0 0 3006700 0 1620800 0 2709800 0 0 847840 0 0 46196 1125 41422 387285;387286;387287;387288 305416 305416 1 SFDLLILK Unmodified 947.56917 0.56916898 3465 Q8NI27 THOC2 THO complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.57 3.85 1 1 5 2 1 1 1 1 1 88.012 87.699 2 0.015996 102038 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.981 23.289 53960000 8552700 0 0 0 0 7914500 6233600 0 6438300 0 0 0 0 10688000 14133000 46197 3465 41423 387289;387290;387291;387292;387293;387294;387295 305417;305418;305419;305420;305421;305422 305418 6 SFDLLVK Unmodified 820.46945 0.46945494 4497 Q9HB71 CACYBP Calcyclin-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 2 24 1 1 2 2 2 2 2 2 2 2 2 2 2 2 71.731 71.506 1;2 0.023527 80957 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 92.467 51.615 1505400000 0 32092000 4604500 50040000 48145000 202340000 100340000 73436000 46177000 144790000 174290000 143850000 80258000 118110000 286880000 46198 4497 41424 387296;387297;387298;387299;387300;387301;387302;387303;387304;387305;387306;387307;387308;387309;387310;387311;387312;387313;387314;387315;387316;387317;387318;387319;387320;387321 305423;305424;305425;305426;305427;305428;305429;305430;305431;305432;305433 305428 10 SFDLTTPYR Unmodified 1098.5346 0.53457439 3944 Q96P48 ARAP1 Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.83 64.917 2 0.0083679 74272 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 69.825 49.304 64632000 0 0 0 3721300 3163500 5509400 4136900 4347100 3516600 7611500 5437500 6120000 5014900 6692700 9360200 46199 3944 41425 387322;387323;387324;387325;387326;387327;387328;387329;387330;387331;387332;387333 305434;305435;305436;305437;305438;305439;305440;305441;305442 305438 9 SFDPNLLHNNGHNGYPNGTSAALR Acetyl (Protein N-term) 2607.2215 0.22146053 517 O75534 CSDE1 Cold shock domain-containing protein E1 yes yes 1 0 0 By MS/MS 10 0 1 1 75.095 75.407 3 9.7659E-06 86508 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.672 37.223 9279700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9279700 46200 517 41426 387334 305443 305443 1 SFDPSAREPPGSTAGLPQEPK Unmodified 2167.0546 0.054561351 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 57.363 56.643 3 2.5534E-12 64123 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 84.108 64.816 348880000 0 30233000 5314400 18988000 27922000 26850000 30274000 32051000 27018000 24455000 42695000 44353000 0 0 38727000 46201 4139 41427 387335;387336;387337;387338;387339;387340;387341;387342;387343;387344;387345;387346 305444;305445;305446;305447;305448;305449;305450;305451;305452;305453;305454;305455;305456;305457;305458;305459;305460;305461;305462;305463;305464;305465;305466 305450 22 SFDSEFK Unmodified 858.37595 0.37594848 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.687 37.868 2 0.029029 41198 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.035 56.188 288890000 0 0 0 13903000 19667000 17726000 18878000 19283000 13015000 22289000 29306000 31998000 38272000 23885000 40669000 46202 2392 41428 387347;387348;387349;387350;387351;387352;387353;387354;387355;387356;387357;387358 305467 305467 1 SFDSNAFTLLLR Unmodified 1382.7194 0.71941505 4842 Q9UBI1 COMMD3 COMM domain-containing protein 3 yes yes 0 0 0 By MS/MS 10 0 1 1 93.055 93.193 2 0.016683 108057 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.395 36.082 1064800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1064800 46203 4842 41429 387359 305468 305468 1 SFDTVIMNPPFGTK Unmodified 1552.7596 0.7595653 4608 Q9NRN9 METTL5 Methyltransferase-like protein 5 yes yes 0 0 0 By MS/MS 2 0 1 1 89.285 84.412 2 5.4724E-07 104882 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.49 86.188 40562000 0 40562000 0 0 0 0 0 0 0 0 0 0 0 0 0 46204 4608 41430 387360 305469 305469 1 SFDTVIMNPPFGTK Oxidation (M) 1568.7545 0.75447993 4608 Q9NRN9 METTL5 Methyltransferase-like protein 5 yes yes 0 1 0 By MS/MS 2 0 1 1 83.551 78.831 2 0.012871 98050 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 55.754 29.081 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46205 4608 41430 387361 305470 305470 6005 1 SFDVNKPGCEVDDLK Unmodified 1721.7931 0.79305028 1427 P41091;Q2VIR3 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 54.48 54.612 2;3 2.6588E-19 61849 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 117.2 101.34 860260000 0 0 0 41711000 46900000 60978000 65227000 53425000 42860000 59020000 85356000 112760000 62363000 83191000 146470000 46206 1427 41431 387362;387363;387364;387365;387366;387367;387368;387369;387370;387371;387372;387373;387374;387375;387376;387377;387378;387379;387380;387381;387382;387383;387384;387385 305471;305472;305473;305474;305475;305476;305477;305478;305479;305480;305481;305482;305483;305484;305485;305486;305487;305488;305489;305490;305491;305492;305493;305494 305480 23 SFDWGYEER Unmodified 1187.4884 0.48835248 1075 P18615 NELFE Negative elongation factor E yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.324 62.421 2 0.0083723 70487 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 69.812 47.072 75658000 0 0 0 3683000 3343300 4629500 5126200 4416400 3736300 6863100 6941600 8456200 7165100 7566800 13730000 46207 1075 41432 387386;387387;387388;387389;387390;387391;387392;387393;387394;387395;387396;387397 305495;305496;305497;305498;305499 305497 5 SFEAPATINSASLHPEK Unmodified 1797.8897 0.88972785 5167 Q9Y3F4 STRAP Serine-threonine kinase receptor-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.67 3.55 7 3 23 2 6 2 2 2 1 2 2 2 2 2 2 2 2 2 63.217 61.849 2;3 3.4133E-63 76481 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 132.59 124.87 5362500000 177730000 3880000000 476810000 28027000 29575000 32784000 38805000 40458000 25345000 47067000 111330000 122170000 37289000 83037000 232010000 46208 5167 41433 387398;387399;387400;387401;387402;387403;387404;387405;387406;387407;387408;387409;387410;387411;387412;387413;387414;387415;387416;387417;387418;387419;387420;387421;387422;387423;387424;387425;387426;387427;387428;387429;387430 305500;305501;305502;305503;305504;305505;305506;305507;305508;305509;305510;305511;305512;305513;305514;305515;305516;305517;305518;305519;305520;305521;305522;305523;305524;305525;305526;305527;305528;305529 305521 30 SFEAPIK Unmodified 790.4225 0.42250475 3491 Q8TCT9 HM13 Minor histocompatibility antigen H13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 41.315 41.328 2 0.032282 46024 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 73.039 34.247 58121000 0 0 0 0 6903700 9668000 8866900 16588000 5934300 10160000 0 0 0 0 0 46209 3491 41434 387431;387432;387433;387434;387435;387436 305530;305531 305530 2 SFEDPPNHAR Unmodified 1168.5261 0.52613497 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 1 2 2 2 2 2 2 2 2 2 2 16.926 17.122 2;3 0.0048636 17013 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 51.445 42.107 247140000 0 0 0 17717000 14532000 20990000 15824000 13482000 16747000 15176000 21869000 32504000 20541000 19502000 38255000 46210 1201 41435 387437;387438;387439;387440;387441;387442;387443;387444;387445;387446;387447;387448;387449;387450;387451;387452;387453;387454;387455;387456;387457;387458;387459 305532;305533;305534;305535;305536;305537;305538;305539;305540;305541;305542;305543;305544 305533 10 SFEDPPNHARSPGNK Unmodified 1651.7703 0.77028142 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 0 1 By MS/MS By matching By MS/MS 2.17 0.373 5 1 3 1 2 21.336 17.419 3;4 0.00027625 25140 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.91 71.714 527070000 497440000 4537400 25091000 0 0 0 0 0 0 0 0 0 0 0 0 46211 1201 41436 387460;387461;387462;387463;387464;387465 305545;305546;305547;305548;305549 305548 3 SFEDRVGTIK Unmodified 1150.5982 0.59823728 325 O43399 TPD52L2 Tumor protein D54 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.58 8 1 22 4 3 2 1 1 2 2 2 2 2 2 2 2 2 2 39.499 38.426 2;3 3.0004E-12 43222 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 179.42 94.924 4006700000 2224400000 112530000 79196000 27469000 29190000 77711000 107760000 128350000 115560000 145260000 209710000 230680000 149410000 148470000 221010000 46212 325 41437 387466;387467;387468;387469;387470;387471;387472;387473;387474;387475;387476;387477;387478;387479;387480;387481;387482;387483;387484;387485;387486;387487;387488;387489;387490;387491;387492;387493;387494;387495;387496 305550;305551;305552;305553;305554;305555;305556;305557;305558;305559;305560;305561;305562;305563;305564;305565;305566;305567;305568;305569;305570;305571;305572;305573 305572 15 SFEEAFQK Unmodified 984.45526 0.45526144 1224 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 43.409 43.777 2 0.014742 48038 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 69.998 65.174 183540000 0 0 0 0 0 0 12744000 12591000 0 19557000 25014000 26612000 28827000 21073000 37120000 46213 1224 41438 387497;387498;387499;387500;387501;387502;387503;387504 305574;305575 305575 2 SFEENVNDSK Unmodified 1167.5044 0.50439647 3086 Q7Z3T8 ZFYVE16 Zinc finger FYVE domain-containing protein 16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 23.87 19.741 2 0.01324 26080 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.607 66.294 56839000 0 56839000 0 0 0 0 0 0 0 0 0 0 0 0 0 46214 3086 41439 387505;387506;387507 305576;305577;305578 305577 3 SFEERVETTVTSLK Unmodified 1624.8308 0.83081599 2642 Q16890 TPD52L1 Tumor protein D53 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 5.78 3.79 3 2 4 2 3 1 1 1 1 75.355 72.7 2;3 6.7943E-23 92237 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.92 74.637 189660000 63413000 103900000 0 0 0 0 0 0 0 6230000 3363600 3887500 0 0 8866200 46215 2642 41440 387508;387509;387510;387511;387512;387513;387514;387515;387516 305579;305580;305581;305582;305583;305584;305585 305581 7 SFENDAQSSDNINFLK Unmodified 1827.8275 0.82752153 276 O15357 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 73.609 73.675 2 2.7052E-73 91270 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 222.99 193.65 197850000 0 0 0 10863000 10339000 20369000 11682000 13195000 10323000 19260000 16476000 18135000 19066000 17961000 30179000 46216 276 41441 387517;387518;387519;387520;387521;387522;387523;387524;387525;387526;387527;387528;387529 305586;305587;305588;305589;305590;305591;305592;305593;305594;305595;305596;305597;305598;305599;305600 305589 15 SFENIQNWMK Oxidation (M) 1311.5918 0.59177169 1649 P51153 RAB13 Ras-related protein Rab-13 yes yes 0 1 0 By matching By matching By matching By MS/MS By matching 10 0 5 1 1 1 1 1 62.234 62.052 2 0.020402 70514 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 42.869 32.84 13306000 0 0 0 1307600 2085400 4672400 2961200 2279200 0 0 0 0 0 0 0 46217 1649 41442 387530;387531;387532;387533;387534 305601 305601 1 SFENIQNWMK Unmodified 1295.5969 0.59685707 1649 P51153 RAB13 Ras-related protein Rab-13 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 78.905 78.451 2 0.0031525 90165 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.815 80.233 43783000 0 14796000 0 0 0 0 1459500 4436700 2062700 4249400 0 0 2003700 3084800 11690000 46218 1649 41442 387535;387536;387537;387538;387539;387540;387541;387542 305602;305603;305604;305605;305606 305603 4 SFENISK Unmodified 823.40758 0.40758296 1830 P61026 RAB10 Ras-related protein Rab-10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 24.885 24.742 2 0.034231 29991 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 85.212 20.435 1032700000 0 13006000 0 64132000 46415000 63302000 58335000 85688000 54640000 86267000 126700000 131980000 86363000 77960000 137870000 46219 1830 41443 387543;387544;387545;387546;387547;387548;387549;387550;387551;387552;387553;387554;387555 305607;305608 305608 2 SFENKPPAHIAASHLSEPAK Unmodified 2130.0858 0.0858019 2136 Q07157 TJP1 Tight junction protein ZO-1 yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 2 1 1 40.598 40.835 4;5 0.0018415 44789 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 38.756 32.641 129940000 0 0 0 0 4020900 17373000 5587500 0 6684700 14085000 0 13568000 39238000 14137000 15251000 46220 2136 41444 387556;387557;387558;387559;387560;387561;387562;387563;387564;387565 305609;305610;305611 305610 3 SFENSLGINVPR Unmodified 1331.6834 0.68336389 2638 Q16851 UGP2 UTP--glucose-1-phosphate uridylyltransferase yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.028 75.087 2 6.0644E-43 86160 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 178.22 143.84 129580000 0 0 0 3675100 4485900 11757000 6267800 7047600 5065500 13240000 12382000 15274000 5614500 11598000 33175000 46221 2638 41445 387566;387567;387568;387569;387570;387571;387572;387573;387574;387575;387576;387577 305612;305613;305614;305615;305616;305617;305618;305619 305613 7 SFENVSVESVDSSSEK Unmodified 1728.769 0.7690036 2695 Q52LW3 ARHGAP29 Rho GTPase-activating protein 29 yes yes 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 54.502 54.64 2 0.0044425 62041 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 55.452 48.919 6806800 0 0 0 0 0 0 1756200 2845900 2204700 0 0 0 0 0 0 46222 2695 41446 387578;387579;387580 305620 305620 1 SFEQAASASFPEK Unmodified 1397.6463 0.64630969 3260 Q8IXJ9 ASXL1 Putative Polycomb group protein ASXL1 yes yes 0 0 0 By MS/MS 2 0 1 1 59.314 53.471 2 0.0041248 68815 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.195 30.648 15917000 0 15917000 0 0 0 0 0 0 0 0 0 0 0 0 0 46223 3260 41447 387581 305621 305621 1 SFEQISANITK Unmodified 1236.635 0.63501672 861 P08237 PFKM ATP-dependent 6-phosphofructokinase, muscle type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 60.82 59.482 2 3.7296E-09 76717 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 155.42 122.04 1950900000 35433000 967520000 14912000 40466000 70129000 62911000 73669000 89612000 46604000 80587000 85058000 105270000 62383000 82189000 134160000 46224 861 41448 387582;387583;387584;387585;387586;387587;387588;387589;387590;387591;387592;387593;387594;387595;387596;387597 305622;305623;305624;305625;305626;305627;305628;305629;305630;305631;305632;305633;305634;305635;305636;305637;305638;305639;305640;305641 305625 20 SFEQLVNLQK Unmodified 1204.6452 0.64518747 3184 Q86WJ1 CHD1L Chromodomain-helicase-DNA-binding protein 1-like yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 77.726 73.977 2 1.1877E-05 92395 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 133.86 106.56 78699000 0 73952000 4747400 0 0 0 0 0 0 0 0 0 0 0 0 46225 3184 41449 387598;387599 305642;305643;305644 305642 3 SFEWLSQMR Oxidation (M) 1198.5441 0.54409322 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 70.468 70.642 2 0.017065 81250 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 50.04 47.185 25227000 0 0 0 0 0 3784600 2864700 0 2335600 4240900 2526700 0 3030900 2177500 4266300 46226 2392 41450 387600;387601;387602;387603;387604;387605;387606;387607 305645;305646;305647 305645 3917 3 SFFDNISCDDNR Unmodified 1488.594 0.59395654 3415 Q8ND56 LSM14A Protein LSM14 homolog A yes yes 0 0 0 By MS/MS By matching By matching By MS/MS 10 0 4 1 1 1 1 66.358 66.287 2 0.0055376 76398 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 64.297 57.402 10633000 0 0 0 0 2596300 2220500 1840500 0 0 3975900 0 0 0 0 0 46227 3415 41451 387608;387609;387610;387611 305648;305649 305649 2 SFFDNISCDDNRER Unmodified 1773.7377 0.73766066 3415 Q8ND56 LSM14A Protein LSM14 homolog A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.248 59.358 3 0.0013895 66677 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 52.265 48.202 130100000 0 0 0 8911400 7655500 8526500 11137000 8600600 5880800 10178000 10357000 17826000 14174000 9373200 17478000 46228 3415 41452 387612;387613;387614;387615;387616;387617;387618;387619;387620;387621;387622;387623 305650;305651;305652;305653;305654;305655;305656;305657;305658 305654 9 SFFDNISSELK Unmodified 1285.619 0.6190323 4218 Q9BX40 LSM14B Protein LSM14 homolog B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.08 3.33 2 1 9 2 1 1 1 1 1 1 1 1 1 1 84.905 84.091 2 0.00064166 97654 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 78.556 55.128 163350000 0 59012000 3828800 4513900 0 7035300 9317100 0 11539000 18995000 10427000 12904000 6519700 0 19259000 46229 4218 41453 387624;387625;387626;387627;387628;387629;387630;387631;387632;387633;387634;387635 305659;305660;305661;305662;305663;305664;305665 305665 6 SFFGFESTVEK Unmodified 1276.5976 0.59756858 3609 Q92503 SEC14L1 SEC14-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79.075 78.363 2 0.00026521 90658 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 107.79 77.218 372620000 17115000 0 5337900 12922000 19269000 30932000 19516000 35966000 29822000 32115000 26875000 40406000 24389000 28198000 49760000 46230 3609 41454 387636;387637;387638;387639;387640;387641;387642;387643;387644;387645;387646;387647;387648;387649 305666;305667;305668;305669;305670;305671;305672;305673;305674;305675;305676;305677;305678;305679;305680;305681 305673 16 SFFGFGQSVEVEILLNDAESRK Acetyl (Protein N-term) 2513.2438 0.24381868 2683 Q4G0F5 VPS26B Vacuolar protein sorting-associated protein 26B yes yes 1 0 1 By MS/MS 3 0 1 1 101.11 97.54 3 2.4771E-11 101743 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 82.975 75.864 1921100 1921100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46231 2683 41455 387650 305682 305682 1 SFFGPLELVEK Unmodified 1264.6703 0.67033959 3998 Q96T51 RUFY1 RUN and FYVE domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 91.753 90.671 2 0.0035122 105002 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.067 66.398 237940000 144240000 66091000 6979600 0 0 1954500 779550 1092700 1092300 2332400 1465100 1530200 1044200 1474100 7861700 46232 3998 41456 387651;387652;387653;387654;387655;387656;387657;387658;387659;387660;387661;387662;387663 305683;305684;305685;305686;305687;305688;305689;305690 305685 8 SFFSVESGTK Unmodified 1087.5186 0.51858998 2456 Q14966 ZNF638 Zinc finger protein 638 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 55.861 56.045 2 0.007439 62685 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 62.463 36.079 118000000 0 0 0 10513000 0 7366200 9916300 10344000 7124600 10198000 10070000 15303000 12460000 11475000 13233000 46233 2456 41457 387664;387665;387666;387667;387668;387669;387670;387671;387672;387673;387674 305691;305692;305693;305694;305695;305696;305697;305698;305699;305700;305701 305698 11 SFGEESK Unmodified 782.34465 0.34464836 4077 Q99996 AKAP9 A-kinase anchor protein 9 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 9.1437 5.8351 2 0.02978 8318 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.262 46.088 111500000 0 111500000 0 0 0 0 0 0 0 0 0 0 0 0 0 46234 4077 41458 387675;387676 305702 305702 1 SFGELVHK Unmodified 915.48142 0.48141661 695 O95819 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 42.045 36.882 2 0.0215 50718 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.568 37.523 89648000 62529000 14729000 12390000 0 0 0 0 0 0 0 0 0 0 0 0 46235 695 41459 387677;387678;387679 305703;305704 305703 2 SFGENDALK Unmodified 979.46108 0.4610751 4685 Q9NVW2 RLIM E3 ubiquitin-protein ligase RLIM yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 32.143 32.381 2 0.028187 35442 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 49.097 26.605 54991000 0 0 0 0 2509500 2566400 3999400 3988000 3087300 3989100 5851500 6665600 3703200 2671600 15959000 46236 4685 41460 387680;387681;387682;387683;387684;387685;387686;387687;387688;387689;387690 305705 305705 1 SFGGEVSWDK Unmodified 1110.4982 0.49818889 167 O00541 PES1 Pescadillo homolog yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 54.333 54.305 2 0.019804 61830 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 47.603 29.617 29784000 0 0 0 3761400 3840000 0 3846200 4404800 3475600 2641100 7814800 0 0 0 0 46237 167 41461 387691;387692;387693;387694;387695;387696;387697 305706;305707 305706 2 SFGNRVENDRER Unmodified 1477.7022 0.70220186 621 O95104 SCAF4 Splicing factor, arginine/serine-rich 15 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.402 12.551 3 0.024403 11896 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 44.426 36.016 201790000 0 0 0 11060000 11444000 17670000 14161000 16768000 15639000 21774000 10622000 31295000 17112000 13146000 21098000 46238 621 41462 387698;387699;387700;387701;387702;387703;387704;387705;387706;387707;387708;387709 305708;305709 305709 0 SFGQFNPGCVER Unmodified 1396.6194 0.61938343 2 A0AV96 RBM47 RNA-binding protein 47 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 61.832 61.894 2 0.0046277 70410 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 72.289 66.136 178910000 0 0 0 11817000 7477600 0 7843600 9996900 25503000 19637000 23670000 31608000 25456000 15898000 0 46239 2 41463 387710;387711;387712;387713;387714;387715;387716;387717;387718;387719 305710;305711;305712;305713;305714;305715;305716;305717;305718 305717 7 SFGQFNPGCVERVK Unmodified 1623.7828 0.78276036 2 A0AV96 RBM47 RNA-binding protein 47 yes yes 0 0 1 By MS/MS 2 0 1 1 71.214 62.947 3 0.01137 83784 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.207 38.591 7954300 7954300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46240 2 41464 387720 305719 305719 1 SFGQTPSQLLIEPHPPR Unmodified 1902.9952 0.99519598 1638 P50851 LRBA Lipopolysaccharide-responsive and beige-like anchor protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 75.602 75.61 3 0.0011245 87252 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 48.883 39.095 56513000 0 0 0 2785600 2197700 8235600 3607800 0 5893000 8016100 6924000 12479000 6374700 0 0 46241 1638 41465 387721;387722;387723;387724;387725;387726;387727;387728;387729 305720;305721;305722;305723;305724;305725;305726 305721 7 SFGSTCQLSEK Unmodified 1242.5551 0.55505184 946 P11388 TOP2A DNA topoisomerase 2-alpha yes yes 0 0 0 By MS/MS 2 0 1 1 36.861 31.946 2 0.0051161 41765 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.228 61.452 11571000 0 11571000 0 0 0 0 0 0 0 0 0 0 0 0 0 46242 946 41466 387730 305727 305727 1 SFGTGTHVK Unmodified 932.47158 0.4715802 4539 Q9NP77 SSU72 RNA polymerase II subunit A C-terminal domain phosphatase SSU72 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 12.507 12.672 2 0.025695 11175 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 50.127 26.603 25675000 0 0 0 1062900 1034300 1400900 0 996170 1091400 1992900 3613000 4586600 2207800 2059300 5630100 46243 4539 41467 387731;387732;387733;387734;387735;387736;387737;387738;387739;387740;387741 305728 305728 1 SFGTRPLSSGFSPEEAQQQDEEFEK Unmodified 2829.2729 0.27294656 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.994 72.063 3 1.2484E-275 82950 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 226.81 224.37 300840000 0 0 0 7938000 10633000 26019000 9778400 19047000 21940000 35883000 30195000 45620000 20491000 25148000 48146000 46244 4285 41468 387742;387743;387744;387745;387746;387747;387748;387749;387750;387751;387752;387753 305729;305730;305731;305732;305733;305734;305735;305736;305737;305738;305739;305740;305741;305742 305734 14 SFHNELLTQLEQK Unmodified 1585.81 0.81002097 5070 Q9UQB8 BAIAP2 Brain-specific angiogenesis inhibitor 1-associated protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 80.934 72.803 3 0.0006847 95473 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.089 60.986 15418000 15418000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46245 5070 41469 387754 305743;305744 305743 2 SFHPEQDAGK Unmodified 1114.5043 0.5043369 4174 Q9BV38 WDR18 WD repeat-containing protein 18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 12.203 12.334 2 0.001703 10529 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 103.19 82.494 52255000 0 0 0 2646900 2548600 0 2740100 3548500 0 6922200 0 5227600 9266500 7357000 11998000 46246 4174 41470 387755;387756;387757;387758;387759;387760;387761;387762;387763 305745;305746;305747;305748;305749;305750;305751 305747 6 SFHSSSSSSSSSTSSSASR Unmodified 1848.7722 0.77219149 4864 Q9UBY9 HSPB7 Heat shock protein beta-7 yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 6.1579 6.3126 3 0.032869 3477 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 23.726 18.067 16906000 0 0 0 0 793100 0 1222100 0 632020 2085700 2770400 3288700 813140 1775100 3525400 46247 4864 41471 387764;387765;387766;387767;387768;387769;387770;387771;387772 305752 305752 1 SFIASEVLK Unmodified 992.55425 0.5542472 2808 Q5VT06 CEP350 Centrosome-associated protein 350 yes yes 0 0 0 By MS/MS 2 0 1 1 73.94 70.988 2 0.037989 86730 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 61.999 41.444 3754200 0 0 3754200 0 0 0 0 0 0 0 0 0 0 0 0 46248 2808 41472 387773 305753 305753 1 SFIDPYQHIIVEHQYSHK Acetyl (Protein N-term) 2282.112 0.11201665 1522 P47712 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase yes yes 1 0 0 By MS/MS 10 0 1 1 79.288 79.534 4 0.00082896 91580 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.779 46.747 13333000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13333000 46249 1522 41473 387774 305754 305754 0 SFIFMSEDALTNPQK Oxidation (M) 1742.8185 0.81853675 3543 Q8WUF8 FAM172A Protein FAM172A yes yes 0 1 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 82.374 78.364 2 3.7594E-05 97667 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.215 78.912 12234000 0 12234000 0 0 0 0 0 0 0 0 0 0 0 0 0 46250 3543 41474 387775;387776;387777 305755;305756 305755 5037 2 SFIGQNK Unmodified 792.413 0.41300269 3998 Q96T51 RUFY1 RUN and FYVE domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 23.011 19.042 2 0.04201 27589 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 126.04 89.993 392050000 213610000 151160000 27279000 0 0 0 0 0 0 0 0 0 0 0 0 46251 3998 41475 387778;387779;387780 305757 305757 0 SFISGGSTITGVGK Unmodified 1309.6878 0.68778057 867 P08581 MET Hepatocyte growth factor receptor yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 66.886 60.86 2 0.0012455 81322 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.805 69.622 28028000 25902000 0 2126400 0 0 0 0 0 0 0 0 0 0 0 0 46252 867 41476 387781;387782 305758;305759 305759 2 SFLDDFESK Unmodified 1086.487 0.4869555 3528 Q8TF74 WIPF2 WAS/WASL-interacting protein family member 2 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS 10 0 4 1 1 1 1 74.166 74.408 2 0.0089221 85247 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.224 39.075 16472000 0 0 0 0 0 0 0 0 0 0 3665600 4334000 0 2148700 6323800 46253 3528 41477 387783;387784;387785;387786 305760;305761 305760 2 SFLDGIYK Unmodified 941.48583 0.48583328 4292 Q9C0I1 MTMR12 Myotubularin-related protein 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 74.534 74.59 2 0.020537 86597 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 62.717 34.611 14845000 0 0 0 2559400 0 0 2012500 0 0 0 0 3319400 0 0 6953700 46254 4292 41478 387787;387788;387789;387790 305762;305763;305764 305764 3 SFLDSGYR Unmodified 943.43995 0.43994572 1073 P18206 VCL Vinculin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.271 49.43 2 0.0086853 56012 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 85.359 46.338 347240000 0 0 0 24266000 10900000 32811000 18152000 15443000 11944000 23817000 38913000 40382000 23073000 37196000 70339000 46255 1073 41479 387791;387792;387793;387794;387795;387796;387797;387798;387799;387800;387801;387802 305765;305766;305767;305768;305769;305770;305771;305772;305773 305765 9 SFLENQK Unmodified 864.43413 0.43413207 1007 P14859 POU2F1 POU domain, class 2, transcription factor 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 24.909 25.052 2 0.04604 26145 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 66.087 11.322 38774000 0 0 0 0 2102100 5937400 3121000 3820600 3405500 3599700 5511300 0 6533000 4743700 0 46256 1007 41480 387803;387804;387805;387806;387807;387808;387809;387810;387811 305774;305775 305774 2 SFLESIDDALAEK Unmodified 1436.7035 0.70349021 2572 Q15750 TAB1 TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 16.636 12.426 3 0.02197 18249 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 35.006 0 13071000 13071000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46257 2572 41481 387812 305776 305776 1 SFLESNYFTK Unmodified 1234.587 0.58700389 392 O60293 ZFC3H1 Zinc finger C3H1 domain-containing protein yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 73.967 74.065 2 0.024295 84502 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 45.022 29.871 36381000 0 0 0 0 3156200 6302100 2465200 2215800 0 2931800 0 6088900 2970800 4564600 5685800 46258 392 41482 387813;387814;387815;387816;387817;387818;387819;387820;387821 305777;305778;305779;305780;305781 305780 5 SFLEYYDFYEVACK Unmodified 1832.7967 0.79673867 4443 Q9H832 UBE2Z Ubiquitin-conjugating enzyme E2 Z yes yes 0 0 0 By MS/MS 2 0 1 1 95.529 87.398 2 0.031739 113020 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.286 42.557 4219300 4219300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46259 4443 41483 387822 305782 305782 0 SFLFEPVVK Unmodified 1064.5906 0.59063271 2888 Q6IN85 SMEK1 Serine/threonine-protein phosphatase 4 regulatory subunit 3A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.27 3.62 2 2 7 2 1 1 1 1 1 1 1 1 1 83.954 82.413 2 0.022185 100426 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 73.26 55.699 411360000 300420000 9806600 72341000 2318600 0 4984400 605180 4019100 0 5395400 5769100 5698300 0 0 0 46260 2888 41484 387823;387824;387825;387826;387827;387828;387829;387830;387831;387832;387833 305783;305784;305785;305786;305787;305788 305787 6 SFLPGEGPGR Unmodified 1015.5087 0.50869399 10 A1X283 SH3PXD2B SH3 and PX domain-containing protein 2B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 47.993 48.027 2 0.005999 54056 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 66.692 46.172 100560000 0 0 0 8975500 11468000 11876000 11535000 7284000 10927000 0 15351000 0 12251000 10891000 0 46261 10 41485 387834;387835;387836;387837;387838;387839;387840;387841;387842 305789;305790;305791;305792;305793;305794;305795;305796;305797 305791 9 SFLSEELGSEVLNLLTNK Unmodified 1992.0415 0.041537049 2165 Q08AF3 SLFN5 Schlafen family member 5 yes yes 0 0 0 By MS/MS 3 0 1 1 101.88 98.325 3 0.0028437 118203 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 32.091 22.169 1068500 0 1068500 0 0 0 0 0 0 0 0 0 0 0 0 0 46262 2165 41486 387843 305798 305798 1 SFLSTLPGQSLIDK Unmodified 1504.8137 0.81370936 671 O95602 POLR1A DNA-directed RNA polymerase I subunit RPA1 yes yes 0 0 0 By MS/MS 10 0 1 1 85.747 85.916 2 0.02826 99339 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.612 33.86 7205100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7205100 46263 671 41487 387844 305799 305799 1 SFLTAEDCFELGK Unmodified 1515.6915 0.69154532 983 P13674 P4HA1 Prolyl 4-hydroxylase subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 84.924 81.315 2 0.011567 101536 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.488 64.105 112680000 0 107310000 5366500 0 0 0 0 0 0 0 0 0 0 0 0 46264 983 41488 387845;387846 305800;305801;305802 305801 3 SFLTVPQGLVK Unmodified 1187.6914 0.69140938 3696 Q92990 GLMN Glomulin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 83.146 82.038 2 0.0063685 94645 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 56.729 48.686 231760000 78607000 62925000 10819000 0 2984100 11445000 0 5018100 3870900 11241000 7344300 8339000 3303500 7586100 18272000 46265 3696 41489 387847;387848;387849;387850;387851;387852;387853;387854;387855;387856;387857;387858;387859 305803;305804;305805;305806;305807;305808;305809;305810;305811;305812 305807 7 SFLVASVLPGPDGNINSPTR Unmodified 2040.064 0.064003825 3084 Q7Z3K3 POGZ Pogo transposable element with ZNF domain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 87.018 87.126 2 4.0601E-58 101067 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 136.99 129.62 51479000 0 0 0 0 3111000 4642000 2315100 3199500 3366100 8228000 4075900 5794300 4384400 4550200 7812400 46266 3084 41490 387860;387861;387862;387863;387864;387865;387866;387867;387868;387869;387870 305813;305814;305815;305816;305817;305818;305819;305820;305821;305822;305823;305824;305825 305815 13 SFLVGEAAR Unmodified 948.50288 0.50288033 2494 Q15067 ACOX1 Peroxisomal acyl-coenzyme A oxidase 1 yes yes 0 0 0 By MS/MS 10 0 1 1 49.995 49.376 2 0.013807 56449 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 59.245 13.527 12870000 0 0 0 12870000 0 0 0 0 0 0 0 0 0 0 0 46267 2494 41491 387871 305826 305826 1 SFLYPGSSTRK Unmodified 1241.6404 0.64043645 4769 Q9NZJ0 DTL Denticleless protein homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.467 38.647 3 0.017147 42910 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 34.695 25.008 95006000 0 0 0 4982600 4506800 8441400 9098500 5672800 7120000 6231200 13814000 6942300 6796700 8364900 13035000 46268 4769 41492 387872;387873;387874;387875;387876;387877;387878;387879;387880;387881;387882;387883 305827;305828;305829 305827 3 SFMALSQDIQK Oxidation (M) 1282.6227 0.62273747 2407 Q14444 CAPRIN1 Caprin-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 3 18 1 1 1 1 2 2 2 2 2 1 2 1 1 2 56.178 55.394 2 1.3774E-21 63469 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 170.5 146.35 821820000 4052700 34970000 4434200 41668000 81655000 72526000 99735000 65997000 77657000 49811000 112360000 71996000 38763000 66197000 0 46269 2407 41493 387884;387885;387886;387887;387888;387889;387890;387891;387892;387893;387894;387895;387896;387897;387898;387899;387900;387901;387902;387903;387904 305830;305831;305832;305833;305834;305835;305836;305837;305838;305839;305840;305841;305842;305843;305844;305845;305846;305847;305848;305849;305850;305851 305850 3948 17 SFMALSQDIQK Unmodified 1266.6278 0.62782285 2407 Q14444 CAPRIN1 Caprin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 69.797 69.629 2 5.3281E-08 79675 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 169.65 155.52 807650000 0 0 3396800 44411000 43156000 52508000 50841000 53410000 49343000 76100000 81947000 90160000 55617000 59568000 147190000 46270 2407 41493 387905;387906;387907;387908;387909;387910;387911;387912;387913;387914;387915;387916;387917 305852;305853;305854;305855;305856;305857;305858;305859;305860;305861;305862;305863;305864;305865;305866;305867;305868;305869;305870;305871 305867 20 SFMESGGTVLSTNWSDVGK Oxidation (M) 2016.9099 0.90987095 5131 Q9Y2Z0 SUGT1 Suppressor of G2 allele of SKP1 homolog yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.8 3.12 3 1 1 1 2 1 1 80.636 76.908 2 3.4385E-84 96040 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 169.17 157.93 177000000 11521000 155190000 3807300 0 0 0 0 0 0 6479500 0 0 0 0 0 46271 5131 41494 387918;387919;387920;387921;387922 305872;305873;305874;305875;305876 305873 6517 5 SFMESGGTVLSTNWSDVGK Unmodified 2000.915 0.91495633 5131 Q9Y2Z0 SUGT1 Suppressor of G2 allele of SKP1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 86.592 81.943 2 1.1454E-133 102676 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 218.31 207.98 196630000 10291000 181810000 4530300 0 0 0 0 0 0 0 0 0 0 0 0 46272 5131 41494 387923;387924;387925;387926 305877;305878;305879;305880 305877 4 SFMNNWEVYK Oxidation (M) 1332.5809 0.58087266 861 P08237 PFKM ATP-dependent 6-phosphofructokinase, muscle type yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 64.087 64.179 2 0.0010513 73273 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 93.649 78.982 305300000 0 0 0 15597000 14401000 23225000 19895000 22409000 20129000 27665000 30180000 45413000 31085000 23367000 31938000 46273 861 41495 387927;387928;387929;387930;387931;387932;387933;387934;387935;387936;387937;387938;387939;387940;387941;387942;387943;387944;387945;387946;387947;387948;387949;387950 305881;305882;305883;305884;305885;305886;305887;305888;305889;305890;305891 305886 1091 10 SFMNNWEVYK Unmodified 1316.586 0.58595803 861 P08237 PFKM ATP-dependent 6-phosphofructokinase, muscle type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.051 77.112 2 0.0024122 89020 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 99.139 76.399 123510000 0 0 0 1524200 2676300 10312000 2652200 10968000 6995100 11759000 12268000 11909000 7289500 9470000 35688000 46274 861 41495 387951;387952;387953;387954;387955;387956;387957;387958;387959;387960;387961;387962 305892;305893;305894;305895;305896;305897;305898;305899;305900 305900 9 SFMVNWTHAPGNVEK Oxidation (M) 1731.8039 0.80388973 2118 Q05707 COL14A1 Collagen alpha-1(XIV) chain yes yes 0 1 0 By MS/MS 1 0 1 1 98.715 103.98 2 0.0029155 83056 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 60.434 18.433 5528100 5528100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46275 2118 41496 387963 305901 305901 3423 1 SFNFYVFPK Unmodified 1147.5702 0.57023162 662 O95453 PARN Poly(A)-specific ribonuclease PARN yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 86.347 85.12 2 0.0064261 98668 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.109 61.53 30170000 10274000 0 0 0 0 0 0 0 2417400 3323900 2755000 0 0 2467500 8932900 46276 662 41497 387964;387965;387966;387967;387968;387969 305902;305903;305904;305905;305906 305903 5 SFNLEASLSK Unmodified 1094.5608 0.56078914 3324 Q8N3P4 VPS8 Vacuolar protein sorting-associated protein 8 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 73.278 67.733 2 0.018886 85675 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.688 44.503 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46277 3324 41498 387970 305907 305907 1 SFNLSALEK Unmodified 1007.5288 0.52876073 987 P13798 APEH Acylamino-acid-releasing enzyme yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 72.467 71.299 2 0.0013123 90395 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.21 56.496 1797200000 241810000 1406500000 43060000 11709000 5132700 6409600 0 4872300 0 3886100 10931000 14282000 9472600 10607000 28537000 46278 987 41499 387971;387972;387973;387974;387975;387976;387977;387978;387979;387980;387981;387982;387983 305908;305909;305910;305911;305912;305913;305914 305909 7 SFNYSPNSSTSEVSSTSASK Unmodified 2065.9076 0.90762234 2810 Q5VT52 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 45.654 45.376 2 9.7487E-72 49994 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 156.17 142.75 471890000 0 14225000 0 23036000 28333000 26460000 33977000 35184000 32068000 49282000 57799000 51763000 51708000 34976000 33079000 46279 2810 41500 387984;387985;387986;387987;387988;387989;387990;387991;387992;387993;387994;387995;387996 305915;305916;305917;305918;305919;305920;305921;305922;305923;305924;305925;305926;305927 305919 13 SFPDFPTPGVVFR Unmodified 1464.7402 0.74015049 847 P07741 APRT Adenine phosphoribosyltransferase yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 90.707 90.807 2 0.0007138 105499 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 72.006 60.841 40662000 0 0 0 0 1065900 3261700 946330 1761400 0 4556600 4118800 4245800 0 3043500 17662000 46280 847 41501 387997;387998;387999;388000;388001;388002;388003;388004;388005 305928;305929;305930;305931;305932;305933;305934 305931 7 SFPLHFDENSFFAGDK Unmodified 1856.837 0.836964 3866 Q96HE7 ERO1L ERO1-like protein alpha yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 2 2 2 2 91.128 86.177 3 6.6195E-11 108641 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.287 80.057 49391000 10798000 38593000 0 0 0 0 0 0 0 0 0 0 0 0 0 46281 3866 41502 388006;388007;388008;388009 305935;305936;305937 305935 3 SFPPPGPAEGLLR Unmodified 1336.7139 0.71393574 1731 P54105 CLNS1A Methylosome subunit pICln yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 2 1 1 1 1 78.444 78.498 2 1.299E-06 90214 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.855 73.075 170340000 0 0 0 9118400 10369000 8122100 11924000 11794000 9528400 17949000 19080000 21819000 16729000 0 33908000 46282 1731 41503 388010;388011;388012;388013;388014;388015;388016;388017;388018;388019;388020;388021 305938;305939;305940;305941;305942;305943;305944;305945;305946;305947;305948;305949;305950;305951 305942 14 SFPPPGPAEGLLRQQPDTEAVLNGK Unmodified 2617.35 0.35001509 1731 P54105 CLNS1A Methylosome subunit pICln yes yes 0 0 1 By MS/MS 2 0 1 1 87.242 79.111 3 0.00015124 102933 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.05 37.484 30707000 30707000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46283 1731 41504 388022 305952 305952 1 SFPVNSDVGVLK Unmodified 1260.6714 0.67140222 1538 P48444 ARCN1 Coatomer subunit delta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 71.918 70.741 2 0.0012284 88813 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.496 75.706 1594500000 38033000 1053400000 20262000 21619000 19247000 42591000 28347000 27940000 21339000 44433000 50046000 60674000 41956000 43412000 81156000 46284 1538 41505 388023;388024;388025;388026;388027;388028;388029;388030;388031;388032;388033;388034;388035;388036;388037;388038 305953;305954;305955;305956;305957;305958;305959;305960;305961;305962;305963;305964;305965 305955 13 SFQGDDSDLLLK Unmodified 1336.6511 0.65106071 5054 Q9UPQ0 LIMCH1 LIM and calponin homology domains-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 69.937 68.678 2 4.2396E-06 78872 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 111.06 76.249 736030000 18708000 271630000 3791900 24642000 27952000 41577000 30122000 26600000 25486000 40857000 43248000 46909000 35870000 37499000 61128000 46285 5054 41506 388039;388040;388041;388042;388043;388044;388045;388046;388047;388048;388049;388050;388051;388052;388053;388054 305966;305967;305968;305969;305970;305971;305972;305973;305974;305975;305976;305977;305978;305979;305980;305981;305982 305971 16 SFQGEIDALSK Unmodified 1193.5928 0.59281755 1406;2357 P39880;Q13948 CUX1 Homeobox protein cut-like 1;Protein CASP no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.55 1 1 4 2 1 1 1 1 69.243 67.158 2 0.00059879 76723 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 79.974 35.527 213070000 0 169920000 0 9460800 0 0 13956000 19737000 0 0 0 0 0 0 0 46286 1406;2357 41507 388055;388056;388057;388058;388059;388060 305983;305984;305985;305986;305987;305988 305986 6 SFQQELDARHDK Unmodified 1472.7008 0.70080487 4031 Q99598 TSNAX Translin-associated protein X yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 34.571 29.72 3 1.0772E-09 41572 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 103.43 98.729 66162000 55716000 0 10446000 0 0 0 0 0 0 0 0 0 0 0 0 46287 4031 41508 388061;388062 305989;305990;305991;305992 305990 4 SFQQSSLSR Unmodified 1038.5094 0.50942227 1473 P43243 MATR3 Matrin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.538 24.74 2 0.0030654 24896 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 124.23 77.163 3708800000 0 0 0 219470000 271970000 236350000 362090000 301770000 200250000 282720000 249850000 430350000 353140000 289420000 511390000 46288 1473 41509 388063;388064;388065;388066;388067;388068;388069;388070;388071;388072;388073;388074 305993;305994;305995;305996;305997;305998;305999;306000;306001;306002;306003;306004;306005;306006;306007 305997 14 SFQSTVTGELNAPYSK Unmodified 1727.8366 0.83662965 3436 Q8NEZ4 KMT2C Histone-lysine N-methyltransferase 2C yes yes 0 0 0 By MS/MS 2 0 1 1 75.215 70.275 2 0.034369 87992 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 46.704 31.732 23184000 0 23184000 0 0 0 0 0 0 0 0 0 0 0 0 0 46289 3436 41510 388075 306008 306008 0 SFREPAPAEALPQQYPEPAPAALCGPPPR Unmodified 3113.5393 0.5392892 3213 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 79.129 79.218 3 4.3424E-43 91655 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 93.446 90.952 87636000 0 0 0 0 4986800 8417000 0 0 6450200 14457000 13653000 14520000 0 8166000 16986000 46290 3213 41511 388076;388077;388078;388079;388080;388081;388082;388083 306009;306010;306011;306012;306013;306014;306015;306016;306017 306014 9 SFREPAPAEALPQQYPEPAPAALCGPPPRAPSR Unmodified 3524.7623 0.76230628 3213 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.606 76.715 4 1.4028E-49 88155 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.862 72.15 268330000 0 0 0 0 7408800 21368000 6426700 26279000 18427000 37070000 31656000 36780000 11557000 14996000 56361000 46291 3213 41512 388084;388085;388086;388087;388088;388089;388090;388091;388092;388093;388094 306018;306019;306020;306021;306022;306023;306024;306025;306026;306027;306028;306029 306021 12 SFRPGDIVLAK Unmodified 1201.6819 0.68190733 5149 Q9Y3B2 EXOSC1 Exosome complex component CSL4 yes yes 0 0 1 By MS/MS 2 0 1 1 73.508 65.312 3 0.019864 86480 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 44.564 19.222 17242000 17242000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46292 5149 41513 388095 306030 306030 1 SFRTSPWDPK Unmodified 1219.5986 0.59857163 2654 Q2NL82 TSR1 Pre-rRNA-processing protein TSR1 homolog yes yes 0 0 1 By MS/MS 2 0 1 1 55.653 47.506 3 0.04125 65045 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.213 47.52 37155000 37155000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46293 2654 41514 388096 306031 306031 0 SFSALAELVAAAK Unmodified 1276.7027 0.70270235 2443 Q14746 COG2 Conserved oligomeric Golgi complex subunit 2 yes yes 0 0 0 By MS/MS 2 0 1 1 97.767 89.636 2 0.015455 115717 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.944 54.043 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46294 2443 41515 388097 306032 306032 1 SFSAMEDDQR Unmodified 1184.4768 0.47680152 2967 Q6SJ93 FAM111B Protein FAM111B yes yes 0 0 0 By MS/MS 10 0 1 1 29.983 30.686 2 0.01182 32364 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.654 58.55 3349100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3349100 46295 2967 41516 388098 306033 306033 1 SFSASQSTDREGASPVTEVR Unmodified 2109.9927 0.99268938 4997 Q9ULJ3 ZBTB21 Zinc finger and BTB domain-containing protein 21 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 42.844 42.895 3 9.5919E-29 46991 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 103.9 87.779 224700000 0 0 0 20126000 21642000 25095000 25164000 23602000 18272000 0 38983000 0 33092000 18726000 0 46296 4997 41517 388099;388100;388101;388102;388103;388104;388105;388106;388107;388108 306034;306035;306036;306037;306038;306039;306040;306041;306042;306043;306044;306045;306046;306047 306037 14 SFSDLFK Unmodified 842.41742 0.41741937 5273 Q9Y6A5 TACC3 Transforming acidic coiled-coil-containing protein 3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 73.65 73.126 2 0.036349 91807 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.614 43.511 80108000 0 26421000 11133000 1962100 0 0 3781600 2049500 3393600 4487400 5901200 5590900 4226300 3957500 7202800 46297 5273 41518 388109;388110;388111;388112;388113;388114;388115;388116;388117;388118;388119;388120 306048;306049 306048 2 SFSDTLK Unmodified 796.39668 0.39668393 4165 Q9BUL8 PDCD10 Programmed cell death protein 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 31.805 30.757 2 0.025177 34219 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 81.297 26.772 2699900000 82325000 2072600000 23745000 30203000 27158000 47480000 40171000 34138000 27446000 55195000 48369000 56684000 50926000 37757000 65758000 46298 4165 41519 388121;388122;388123;388124;388125;388126;388127;388128;388129;388130;388131;388132;388133;388134;388135;388136 306050;306051;306052;306053;306054;306055;306056 306056 7 SFSEDAVTDSSGSGTLPR Unmodified 1811.8174 0.81735077 2646 Q27J81 INF2 Inverted formin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 2 1 56.461 56.533 2 9.9716E-27 63488 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 134.98 97.832 109960000 0 0 0 4240100 2836400 6368200 5543300 5632000 0 6295200 16033000 0 6506500 8407700 48101000 46299 2646 41520 388137;388138;388139;388140;388141;388142;388143;388144;388145;388146;388147 306057;306058;306059;306060;306061;306062;306063;306064;306065 306060 9 SFSEDVISHK Unmodified 1147.551 0.55095274 2086 Q03001 DST Dystonin yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 1 2 42.282 38.121 2;3 0.021422 48238 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 63.816 44.03 19417000 0 8078700 11338000 0 0 0 0 0 0 0 0 0 0 0 0 46300 2086 41521 388148;388149;388150 306066;306067 306066 1 SFSEHDLAQLR Unmodified 1301.6364 0.6364137 3575 Q8WWL2 SPIRE2 Protein spire homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 55.295 55.394 3 0.020761 61951 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.021 29.292 61301000 0 0 0 3300300 3583000 5521900 4735100 5412100 0 7095800 0 9175500 7661100 5612000 9204400 46301 3575 41522 388151;388152;388153;388154;388155;388156;388157;388158;388159;388160 306068;306069;306070 306068 3 SFSHSFSALAK Unmodified 1180.5877 0.58767259 2170 Q09161 NCBP1 Nuclear cap-binding protein subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.54 3.69 4 9 2 2 1 1 1 1 1 2 1 1 51.896 49.951 2;3 0.00045279 68079 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.16 77.216 417340000 141780000 73091000 0 0 0 28175000 0 4290000 18520000 26281000 0 22955000 48955000 9385900 43905000 46302 2170 41523 388161;388162;388163;388164;388165;388166;388167;388168;388169;388170;388171;388172;388173 306071;306072;306073;306074;306075;306076;306077;306078;306079;306080 306074 8 SFSLSSNFTTPEEVPTGTK Unmodified 2027.9688 0.96876604 1046 P17029 ZKSCAN1 Zinc finger protein with KRAB and SCAN domains 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 2 1 1 1 1 79.194 79.271 2 5.147E-17 91744 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 115.78 102.8 46872000 0 0 0 0 5702400 5641800 0 0 3959600 10850000 5303400 0 0 4527900 10887000 46303 1046 41524 388174;388175;388176;388177;388178;388179;388180;388181 306081;306082;306083;306084;306085;306086 306084 6 SFSQEGRTTK Unmodified 1139.5571 0.55710075 916 P10155 TROVE2 60 kDa SS-A/Ro ribonucleoprotein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 6 2 2 2 8.8397 5.7541 2;3 0.014735 9979 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 105.1 93.146 1224600000 957460000 110600000 156500000 0 0 0 0 0 0 0 0 0 0 0 0 46304 916 41525 388182;388183;388184;388185;388186;388187 306087;306088;306089;306090;306091 306090 4 SFSQMISEK Unmodified 1055.4957 0.49574604 2295 Q13459 MYO9B Unconventional myosin-IXb yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 55.052 49.08 2 0.00050037 64038 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.23 99.412 67299000 17901000 43282000 6115300 0 0 0 0 0 0 0 0 0 0 0 0 46305 2295 41526 388188;388189;388190 306092;306093;306094 306092 3 SFSQPEAGGSHHK Unmodified 1367.6218 0.62182627 3567 Q8WVV9 HNRNPLL Heterogeneous nuclear ribonucleoprotein L-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 1 1 2 2 2 2 2 2 3 2 2 2 8.3633 8.5185 2;3 0.00063907 5553 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 62.891 50.264 200550000 0 0 0 11431000 12546000 12807000 11561000 731740 11564000 17325000 39640000 26512000 21754000 13442000 21232000 46306 3567 41527 388191;388192;388193;388194;388195;388196;388197;388198;388199;388200;388201;388202;388203;388204;388205;388206;388207;388208;388209;388210;388211;388212;388213 306095;306096;306097;306098;306099;306100;306101;306102;306103;306104;306105;306106 306101 11 SFSQSSALAR Unmodified 1052.5251 0.52507234 27 A6NFI3 ZNF316 Zinc finger protein 316 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 31.145 31.352 2 0.00091175 34066 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 114.89 67.827 52038000 0 0 0 4926000 0 0 5590800 3632300 5756500 6235600 6582700 0 10489000 0 8825400 46307 27 41528 388214;388215;388216;388217;388218;388219;388220;388221;388222 306107;306108;306109;306110;306111;306112;306113 306111 7 SFSQSYELVTHK Unmodified 1424.6936 0.69359423 2903 Q6NX49 ZNF544 Zinc finger protein 544 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 58.178 52.119 3 0.0020026 70909 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.802 49.072 14941000 12186000 0 2754400 0 0 0 0 0 0 0 0 0 0 0 0 46308 2903 41529 388223;388224 306114;306115 306114 2 SFSRPDHLNSHVR Unmodified 1550.7702 0.77022184 1781 P56270 MAZ Myc-associated zinc finger protein yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 25.616 25.773 4 0.0035878 27516 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 41.644 35.207 195260000 0 0 0 7243100 0 34191000 13442000 15123000 32565000 0 17441000 0 45560000 29693000 0 46309 1781 41530 388225;388226;388227;388228;388229;388230;388231;388232 306116;306117 306116 2 SFSSPENFQR Unmodified 1197.5415 0.54145068 5223 Q9Y580 RBM7 RNA-binding protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 43.458 43.536 2 0.001504 47738 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.657 81.069 39780000 0 0 0 3675100 2975900 0 4618900 5719800 0 5829700 5770700 0 0 0 11189000 46310 5223 41531 388233;388234;388235;388236;388237;388238;388239;388240;388241;388242;388243 306118;306119;306120;306121;306122;306123;306124;306125;306126;306127 306121 10 SFSSQRPVDR Unmodified 1177.584 0.5839842 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.867 16.037 3 0.007511 14665 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.419 25.585 130950000 0 0 0 6135900 6222800 7189300 6364200 4914000 6907600 13646000 16908000 14370000 19211000 11763000 17318000 46311 5216 41532 388244;388245;388246;388247;388248;388249;388250;388251;388252;388253;388254;388255 306128;306129;306130 306128 3 SFSSSAEEHS Unmodified 1066.4203 0.42033249 3819 Q96EQ0 SGTB Small glutamine-rich tetratricopeptide repeat-containing protein beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 13.809 14.002 2 0.0082453 12663 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.508 13.695 38656000 0 0 0 0 1836800 1735900 1606600 0 1725200 4096300 4862200 8117000 4624700 3275300 6776000 46312 3819 41533 388256;388257;388258;388259;388260;388261;388262;388263;388264;388265 306131;306132 306131 2 SFSTALYGESDL Unmodified 1288.5823 0.58231244 356 O43707 ACTN4 Alpha-actinin-4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 81.631 80.361 2 2.6433E-05 97957 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.01 107.01 2531800000 66969000 2269000000 25483000 3389400 4924400 14887000 5529000 4630700 4962800 12930000 27321000 23480000 5937300 17268000 45151000 46313 356 41534 388266;388267;388268;388269;388270;388271;388272;388273;388274;388275;388276;388277;388278;388279;388280;388281;388282 306133;306134;306135;306136;306137;306138;306139;306140;306141;306142;306143;306144;306145;306146 306138 12 SFSTASAITPSVSR Unmodified 1409.7151 0.71505795 74 CON__P13647;P13647 KRT5 Keratin, type II cytoskeletal 5 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.64 56.756 2 3.8974E-17 64368 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 152.07 127.29 + 1332000000 0 0 0 345490000 75300000 49218000 75223000 248400000 0 0 78298000 84578000 287820000 55320000 32356000 46314 74 41535 388283;388284;388285;388286;388287;388288;388289;388290;388291;388292;388293;388294 306147;306148;306149;306150;306151;306152;306153;306154;306155;306156;306157;306158;306159;306160;306161 306158 15 SFTASCPVSAFVPK Unmodified 1496.7334 0.73335055 2936 Q6P587 FAHD1 Acylpyruvase FAHD1, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 82.478 78.044 2 6.2323E-06 98250 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.34 89.988 35560000 13679000 19458000 0 2423100 0 0 0 0 0 0 0 0 0 0 0 46315 2936 41536 388295;388296;388297 306162;306163;306164 306162 3 SFTERHAEQGK Unmodified 1288.616 0.61601261 3014 Q6ZT12 UBR3 E3 ubiquitin-protein ligase UBR3 yes yes 0 0 1 By MS/MS 2 0 1 1 8.3832 4.7445 3 0.0079359 8258 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.448 21.967 21522000 21522000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46316 3014 41537 388298 306165 306165 1 SFTLDDESLK Unmodified 1153.5503 0.55028404 3186 Q86WR7 PROSER2 Proline and serine-rich protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 61.856 61.951 2 0.009563 70880 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 57.55 40.164 127680000 0 0 0 10798000 11075000 10536000 11717000 7410300 7573900 0 14599000 17489000 9834300 9026000 17616000 46317 3186 41538 388299;388300;388301;388302;388303;388304;388305;388306;388307;388308;388309 306166;306167;306168;306169;306170;306171;306172;306173;306174 306171 8 SFTNQIIL Unmodified 934.51238 0.51238239 3878 Q96IJ6 GMPPA Mannose-1-phosphate guanyltransferase alpha yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 83.952 84.09 2 0.044824 97308 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 48.761 41.41 26129000 0 0 0 0 0 6474800 6047100 0 3254000 3762600 0 3060100 0 0 3530300 46318 3878 41539 388310;388311;388312;388313;388314;388315 306175 306175 1 SFTNYSGGYSADHPVIK Unmodified 1841.8584 0.85842773 2525 Q15386 UBE3C Ubiquitin-protein ligase E3C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 56.778 55.852 3 0.0040189 75507 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.708 36.41 184060000 151710000 0 0 0 0 6890000 0 5039100 0 5765000 0 5145200 0 3767700 5743200 46319 2525 41540 388316;388317;388318;388319;388320;388321;388322 306176;306177;306178;306179;306180 306178 5 SFTPDHVVYAR Unmodified 1290.6357 0.63568542 2911 Q6NZI2 PTRF Polymerase I and transcript release factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.25 5 19 2 1 2 2 2 2 1 1 2 1 2 2 1 2 1 48.644 47.155 2;3 0.00022912 52378 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 83.397 63.635 990460000 128840000 17440000 32289000 60123000 55539000 67840000 54476000 34629000 45976000 83408000 92043000 96753000 60065000 65883000 95154000 46320 2911 41541 388323;388324;388325;388326;388327;388328;388329;388330;388331;388332;388333;388334;388335;388336;388337;388338;388339;388340;388341;388342;388343;388344;388345;388346 306181;306182;306183;306184;306185;306186;306187;306188;306189;306190;306191;306192;306193;306194;306195;306196;306197;306198;306199;306200;306201;306202;306203;306204;306205;306206 306202 22 SFTSEDDLVK Unmodified 1139.5346 0.53463397 128 O00203 AP3B1 AP-3 complex subunit beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.53 2.94 1 2 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 48.876 47.932 2 0.0020595 54476 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 86.67 74.901 879810000 407170 380810000 0 30698000 26809000 53322000 38427000 38677000 28541000 44510000 48119000 40794000 50056000 46248000 52399000 46321 128 41542 388347;388348;388349;388350;388351;388352;388353;388354;388355;388356;388357;388358;388359;388360;388361 306207;306208;306209;306210;306211;306212;306213;306214 306207 5 SFTSSSPSSPSR Unmodified 1225.5575 0.55749468 597 O94875 SORBS2 Sorbin and SH3 domain-containing protein 2 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 20.864 21.032 2 0.0027969 20733 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.353 29.981 15781000 0 0 0 0 1270500 1409200 1905300 0 0 2729200 2704000 0 0 0 5763100 46322 597 41543 388362;388363;388364;388365;388366;388367 306215;306216;306217;306218 306217 4 SFTSSYAISAANHVK Unmodified 1581.7787 0.77872084 2406 Q14432 PDE3A cGMP-inhibited 3',5'-cyclic phosphodiesterase A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 1 1 1 2 1 2 1 2 1 2 1 55.396 55.564 2;3 0.0002912 63100 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 70.26 65.204 267200000 0 0 0 10162000 11250000 21451000 15385000 17620000 14691000 27342000 28728000 34765000 13644000 29419000 42739000 46323 2406 41544 388368;388369;388370;388371;388372;388373;388374;388375;388376;388377;388378;388379;388380;388381;388382;388383 306219;306220;306221;306222;306223;306224;306225;306226 306219 1 SFTTNEK Unmodified 825.38685 0.38684752 2370 Q14134 TRIM29 Tripartite motif-containing protein 29 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 10.398 7.0795 2 0.024805 9597 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.69 40.892 94441000 0 94441000 0 0 0 0 0 0 0 0 0 0 0 0 0 46324 2370 41545 388384;388385 306227 306227 1 SFTTTIHK Unmodified 933.49198 0.4919813 2261 Q13257 MAD2L1 Mitotic spindle assembly checkpoint protein MAD2A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.79 22.995 2 0.0099634 24406 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 81.191 20.392 449990000 0 0 0 15985000 15433000 28866000 24963000 22600000 17025000 52442000 46636000 43953000 50604000 57667000 73819000 46325 2261 41546 388386;388387;388388;388389;388390;388391;388392;388393;388394;388395;388396;388397 306228;306229;306230;306231;306232;306233;306234 306228 5 SFTVDIR Unmodified 836.43922 0.43921744 2033 Q00341 HDLBP Vigilin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.075 55.207 2 0.019157 62409 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 110.63 58.402 403990000 0 0 0 17004000 19416000 29309000 28560000 23800000 23285000 44477000 49505000 42348000 34914000 31962000 59407000 46326 2033 41547 388398;388399;388400;388401;388402;388403;388404;388405;388406;388407;388408;388409 306235;306236;306237;306238;306239 306237 5 SFTVMELVK Unmodified 1052.5576 0.55761802 2704 Q53H82 LACTB2 Beta-lactamase-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 4 3.46 3 1 1 1 1 1 86.1 82.3 2 0.0072915 103688 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.114 59.29 212860000 149550000 34005000 22706000 0 0 0 0 0 0 0 0 0 0 0 6596800 46327 2704 41548 388410;388411;388412;388413 306240;306241;306242;306243 306240 4 SFTVMELVK Oxidation (M) 1068.5525 0.55253264 2704 Q53H82 LACTB2 Beta-lactamase-like protein 2 yes yes 0 1 0 By MS/MS 2 0 1 1 78.188 70.057 2 0.012186 92183 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.452 44.894 22669000 22669000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46328 2704 41548 388414 306244 306244 4355 1 SFVAGVIR Acetyl (Protein N-term) 889.50215 0.50215205 1418 P40692 MLH1 DNA mismatch repair protein Mlh1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 83.431 83.494 2 0.0095301 96903 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 56.091 38.396 169130000 0 0 0 6960700 7323800 9699600 13203000 13211000 9012700 17341000 24098000 18404000 17155000 13250000 19471000 46329 1418 41549 388415;388416;388417;388418;388419;388420;388421;388422;388423;388424;388425;388426 306245;306246;306247;306248;306249;306250 306249 6 SFVAYEELIK Acetyl (Protein N-term) 1239.6387 0.63870511 3841 Q96FX7 TRMT61A tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A yes yes 1 0 0 By MS/MS By MS/MS 2 0.816 1 1 1 1 2 100.01 99.082 2 0.0013805 114313 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.013 68.443 241290000 22723000 218570000 0 0 0 0 0 0 0 0 0 0 0 0 0 46330 3841 41550 388427;388428;388429 306251;306252;306253 306251 3 SFVCFGDDGEPQLK Unmodified 1597.7083 0.70825802 2164 Q08AD1 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.272 76.33 2 0.00051504 88213 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 89.171 81.892 73534000 0 0 0 2767000 4367000 6591200 5072700 4872300 5147600 5452700 8471500 8684400 4852000 5258600 11996000 46331 2164 41551 388430;388431;388432;388433;388434;388435;388436;388437;388438;388439;388440;388441 306254;306255;306256;306257;306258;306259;306260;306261;306262;306263;306264;306265 306259 12 SFVCSTK Unmodified 827.38474 0.38473903 496 O75419 CDC45 Cell division control protein 45 homolog yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 19.037 15.003 2 0.031432 19416 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.369 52.813 71901000 16927000 54974000 0 0 0 0 0 0 0 0 0 0 0 0 0 46332 496 41552 388442;388443 306266;306267 306266 2 SFVELSGAER Unmodified 1093.5404 0.54038805 2184 Q12769 NUP160 Nuclear pore complex protein Nup160 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.116 52.262 2 0.0035551 59041 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 76.064 54.764 114200000 0 0 0 5534300 6255500 9556700 8160000 9002200 6812600 10559000 8557700 15110000 10072000 9466600 15109000 46333 2184 41553 388444;388445;388446;388447;388448;388449;388450;388451;388452;388453;388454;388455 306268;306269;306270;306271;306272;306273;306274;306275;306276;306277;306278;306279;306280;306281 306277 14 SFVGLGPR Unmodified 831.46029 0.46028724 869 P08651 NFIC Nuclear factor 1 C-type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.228 51.378 2 0.043986 58083 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 49.058 27.512 220380000 0 0 0 10221000 9326000 15423000 14076000 10427000 15121000 25039000 22073000 19293000 19050000 24867000 35464000 46334 869 41554 388456;388457;388458;388459;388460;388461;388462;388463;388464;388465;388466;388467 306282;306283 306283 2 SFVKPPSLANLDK Unmodified 1414.782 0.78201531 3432 Q8NEY1 NAV1 Neuron navigator 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.828 68.908 3 0.00071273 79564 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 55.291 47.24 128040000 0 0 0 6740300 5800200 10510000 8659600 8190000 9867700 10729000 10521000 14783000 11375000 13897000 16967000 46335 3432 41555 388468;388469;388470;388471;388472;388473;388474;388475;388476;388477;388478;388479 306284;306285;306286;306287;306288;306289;306290;306291;306292;306293;306294;306295 306295 11 SFVLNLGK Unmodified 876.5069 0.50690308 881 P09382 LGALS1 Galectin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.57 3.85 3 1 3 1 2 1 1 1 1 74.422 71.799 2 0.0067843 81100 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 97.068 63.329 3001400000 1842000000 622970000 202870000 0 0 0 0 0 0 0 0 73553000 0 53909000 206120000 46336 881 41556 388480;388481;388482;388483;388484;388485;388486 306296;306297;306298;306299;306300;306301;306302 306297 7 SFVLPSWMVEK Unmodified 1321.674 0.67404476 4343 Q9H147 DNTTIP1 Deoxynucleotidyltransferase terminal-interacting protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 89.481 89.625 2 0.0033834 103767 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.04 50.271 1593000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1593000 46337 4343 41557 388487 306303 306303 1 SFVPFPR Unmodified 848.45447 0.45447358 901 P0CG12 CHTF8 Chromosome transmission fidelity protein 8 homolog isoform 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.629 68.708 2 0.044016 78888 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.994 51.773 224980000 0 0 0 10709000 15703000 14680000 19602000 16856000 12061000 19939000 26313000 24065000 19681000 17114000 28256000 46338 901 41558 388488;388489;388490;388491;388492;388493;388494;388495;388496;388497;388498;388499 306304 306304 1 SFVSPPVLSPK Unmodified 1156.6492 0.64921022 2831 Q5VZE5 NAA35 N-alpha-acetyltransferase 35, NatC auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 71.848 71.886 2 0.00028318 82614 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 93.111 83.2 314720000 0 0 0 9513700 15288000 16565000 3907900 6334100 3072700 69726000 77097000 107760000 2356500 3097700 0 46339 2831 41559 388500;388501;388502;388503;388504;388505;388506;388507;388508;388509;388510 306305;306306;306307;306308;306309;306310;306311;306312;306313 306308 9 SFYGSTLFLCR Unmodified 1349.6438 0.64380726 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 82.852 82.949 2 0.00027847 95594 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.761 73.848 65313000 0 0 0 0 2139800 6827200 2213300 3387700 0 5321600 6484500 6605300 3663000 6481200 22190000 46340 1565 41560 388511;388512;388513;388514;388515;388516;388517;388518;388519;388520 306314;306315;306316;306317;306318;306319;306320;306321;306322 306317 9 SFYLALYK Unmodified 1003.5379 0.53786886 4089 Q9BQ70 TCF25 Transcription factor 25 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 79.179 79.356 2 0.035209 90969 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 52.636 37.004 19601000 0 0 0 0 0 0 0 0 0 0 0 6020200 0 4473000 9108000 46341 4089 41561 388521;388522;388523 306323;306324;306325 306324 3 SFYPEEVSSMVLTK Oxidation (M) 1631.7753 0.77527495 934 P11142 HSPA8 Heat shock cognate 71 kDa protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.74 3.88 2 23 7 45 11 14 7 4 4 4 4 3 4 4 4 4 3 4 3 78.545 77.437 2;3 3.8583E-24 93760 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 132.32 89.987 15314000000 773870000 10060000000 677940000 123840000 190300000 272660000 267250000 156620000 226880000 366700000 479870000 542170000 168200000 413100000 594310000 46342 934 41562 388524;388525;388526;388527;388528;388529;388530;388531;388532;388533;388534;388535;388536;388537;388538;388539;388540;388541;388542;388543;388544;388545;388546;388547;388548;388549;388550;388551;388552;388553;388554;388555;388556;388557;388558;388559;388560;388561;388562;388563;388564;388565;388566;388567;388568;388569;388570;388571;388572;388573;388574;388575;388576;388577;388578;388579;388580;388581;388582;388583;388584;388585;388586;388587;388588;388589;388590;388591;388592;388593;388594;388595;388596;388597;388598;388599;388600 306326;306327;306328;306329;306330;306331;306332;306333;306334;306335;306336;306337;306338;306339;306340;306341;306342;306343;306344;306345;306346;306347;306348;306349;306350;306351;306352;306353;306354;306355;306356;306357;306358;306359;306360;306361;306362;306363;306364;306365;306366;306367;306368;306369;306370;306371;306372;306373;306374;306375;306376;306377;306378;306379;306380;306381;306382;306383;306384 306336 1218 35 SFYPEEVSSMVLTK Unmodified 1615.7804 0.78036033 934 P11142 HSPA8 Heat shock cognate 71 kDa protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.24 3.76 1 9 3 24 4 6 3 2 2 2 2 2 2 2 2 2 2 2 2 85.666 84.522 2;3 2.8586E-29 104710 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.13 125.13 26970000000 1052600000 23720000000 387350000 15960000 48417000 83355000 41070000 104060000 53467000 155240000 182290000 158310000 45877000 172680000 749370000 46343 934 41562 388601;388602;388603;388604;388605;388606;388607;388608;388609;388610;388611;388612;388613;388614;388615;388616;388617;388618;388619;388620;388621;388622;388623;388624;388625;388626;388627;388628;388629;388630;388631;388632;388633;388634;388635;388636;388637 306385;306386;306387;306388;306389;306390;306391;306392;306393;306394;306395;306396;306397;306398;306399;306400;306401;306402;306403;306404;306405;306406;306407;306408;306409;306410;306411;306412;306413;306414;306415;306416;306417;306418;306419;306420;306421;306422 306395 36 SFYSSHYAR Unmodified 1116.4989 0.49885759 3433 Q8NEY8 PPHLN1 Periphilin-1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 26.872 27.237 2 0.026405 29202 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 49.833 30.13 16558000 0 0 0 0 0 0 0 1524900 0 3641400 3599700 0 2664500 0 5127500 46344 3433 41563 388638;388639;388640;388641;388642 306423 306423 1 SFYSTEAVQAHMNDK Unmodified 1726.7621 0.7620845 3723 Q969S3 ZNF622 Zinc finger protein 622 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 58 52.022 3 0.00035741 67440 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 52.372 49.613 73456000 30132000 32788000 10536000 0 0 0 0 0 0 0 0 0 0 0 0 46345 3723 41564 388643;388644;388645 306424;306425;306426 306424 3 SFYSTEAVQAHMNDK Oxidation (M) 1742.757 0.75699912 3723 Q969S3 ZNF622 Zinc finger protein 622 yes yes 0 1 0 By MS/MS 2 0 1 1 42.22 38.552 3 0.013425 48368 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 40.242 32.65 9854700 0 0 9854700 0 0 0 0 0 0 0 0 0 0 0 0 46346 3723 41564 388646 306427 306427 5296 0 SFYVRSTDPTMIK Unmodified 1543.7705 0.77046434 128 O00203 AP3B1 AP-3 complex subunit beta-1 yes yes 0 0 1 By MS/MS 2 0 1 1 68.106 59.811 3 0.0040025 79980 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.409 42.086 66535000 66535000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46347 128 41565 388647 306428;306429 306429 2 SGAAAAAVTTETAQHAQGAK Unmodified 1839.9075 0.90750318 1147 P22830 FECH Ferrochelatase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.17 3.85 2 1 3 2 1 1 1 1 32.828 31.149 3 1.827E-15 41151 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 50.87 17.605 16379000 0 2850300 2127100 0 0 0 0 0 0 0 5460600 0 0 0 5941200 46348 1147 41566 388648;388649;388650;388651;388652;388653 306430;306431;306432;306433;306434 306431 4 SGAAQGLAEVMAGLGVEK Unmodified 1686.8611 0.86107026 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 90.396 90.536 2 1.4902E-08 104838 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.468 61.242 11867000 0 0 0 0 0 0 0 0 0 2355300 2054100 0 0 1552500 5904600 46349 3641 41567 388654;388655;388656;388657 306435;306436;306437;306438 306436 4 SGAAVCEFFLK Unmodified 1227.5958 0.59579444 677 O95639 CPSF4 Cleavage and polyadenylation specificity factor subunit 4 yes yes 0 0 0 By MS/MS 2 0 1 1 82.568 80.106 2 0.040378 97049 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 49.418 38.951 1524100 0 0 1524100 0 0 0 0 0 0 0 0 0 0 0 0 46350 677 41568 388658 306439 306439 1 SGADPVTSVGK Unmodified 1016.5138 0.51383895 3698 Q92994 BRF1 Transcription factor IIIB 90 kDa subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 24.135 24.275 2 0.0022529 26211 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 68.557 48.567 51768000 0 0 0 5137800 5199800 0 6046400 5406400 4965100 6857900 7966200 10189000 0 0 0 46351 3698 41569 388659;388660;388661;388662;388663;388664;388665;388666;388667 306440;306441;306442;306443;306444;306445 306445 6 SGAEEQGPIDGPSK Unmodified 1370.6314 0.6313879 335 O43493 TGOLN2 Trans-Golgi network integral membrane protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 22.747 22.916 2 9.2861E-08 23468 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 113.63 102.84 26232000 0 0 0 2177700 2537800 3081800 0 2503200 0 3077700 3066000 4209800 5578100 0 0 46352 335 41570 388668;388669;388670;388671;388672;388673;388674;388675 306446;306447;306448;306449;306450;306451 306450 6 SGAEVEAGDAAER Unmodified 1260.5582 0.55822296 3276 Q8IY67 RAVER1 Ribonucleoprotein PTB-binding 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.268 18.457 2 1.1458E-12 18861 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 128.01 121.12 1256300000 0 0 0 64780000 113770000 102090000 96235000 102000000 89629000 120330000 98379000 150410000 106260000 85048000 127330000 46353 3276 41571 388676;388677;388678;388679;388680;388681;388682;388683;388684;388685;388686;388687 306452;306453;306454;306455;306456;306457;306458;306459;306460;306461;306462;306463;306464;306465 306453 14 SGAEVEAGDAAERR Unmodified 1416.6593 0.65933399 3276 Q8IY67 RAVER1 Ribonucleoprotein PTB-binding 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.176 16.352 3 0.00010539 15750 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 61.409 57.03 112830000 0 0 0 6868500 4286800 7512400 6663700 7172400 9342800 7167500 8308300 18727000 12754000 11430000 12597000 46354 3276 41572 388688;388689;388690;388691;388692;388693;388694;388695;388696;388697;388698;388699 306466;306467;306468;306469;306470;306471;306472;306473;306474 306473 7 SGAGSFGSR Unmodified 824.37768 0.37767982 2056;83 CON__Q01546;Q01546 KRT76 Keratin, type II cytoskeletal 2 oral no no 0 0 0 By MS/MS By matching 10 0 2 1 1 10.482 10.512 2 0.016563 8904 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 56.432 35.131 + 2968000 0 0 0 2421800 0 0 0 0 0 0 0 0 546130 0 0 46355 83;2056 41573 388700;388701 306475 306475 1 SGAGVPAVILR Unmodified 1038.6186 0.61857879 3619 Q92542 NCSTN Nicastrin yes yes 0 0 0 By MS/MS 10 0 1 1 67.181 66.503 2 0.015496 76973 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 44.719 33.65 4576000 0 0 0 4576000 0 0 0 0 0 0 0 0 0 0 0 46356 3619 41574 388702 306476 306476 1 SGAHVDFYDK Unmodified 1137.5091 0.50908792 1352 P35270 SPR Sepiapterin reductase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 6 2 24 2 4 2 2 2 2 2 2 2 2 2 2 2 2 2 33.382 32.302 2;3 0.0014089 41065 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 77.062 60.391 746340000 29230000 174630000 126920000 14823000 25074000 24549000 21289000 29080000 24137000 29693000 34800000 92468000 37722000 35090000 46831000 46357 1352 41575 388703;388704;388705;388706;388707;388708;388709;388710;388711;388712;388713;388714;388715;388716;388717;388718;388719;388720;388721;388722;388723;388724;388725;388726;388727;388728;388729;388730;388731;388732;388733;388734 306477;306478;306479;306480;306481;306482;306483;306484;306485;306486;306487;306488;306489;306490;306491;306492;306493 306488 12 SGAIMSALSDTEIQR Oxidation (M) 1593.7668 0.76683553 2239;479 O75334;O75335;Q13136 PPFIA2;PPFIA4;PPFIA1 Liprin-alpha-2;Liprin-alpha-4;Liprin-alpha-1 no no 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 60.578 60.873 2 0.002424 69352 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 58.172 41.147 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46358 479;2239 41576 388735;388736;388737 306494;306495;306496 306494 604 3 SGAISAIK Unmodified 745.4334 0.43340378 1075 P18615 NELFE Negative elongation factor E yes yes 0 0 0 By MS/MS 2 0 1 1 27.043 22.783 1 0.037819 30098 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.81 29.024 25435000 0 25435000 0 0 0 0 0 0 0 0 0 0 0 0 0 46359 1075 41577 388738 306497 306497 0 SGALDVLQMK Acetyl (Protein N-term);Oxidation (M) 1118.5642 0.56415996 875 P08865 RPSA 40S ribosomal protein SA yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.77 5 2 11 3 3 1 1 1 1 1 1 1 1 1 1 1 1 77.244 76.17 2 5.7017E-05 88323 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 136.75 82.978 309230000 30472000 118970000 350760 7240700 4113500 5978200 7759200 5357700 5373200 11007000 23301000 23714000 0 23983000 41607000 46360 875 41578 388739;388740;388741;388742;388743;388744;388745;388746;388747;388748;388749;388750;388751;388752;388753;388754;388755;388756 306498;306499;306500;306501;306502;306503;306504;306505;306506;306507;306508;306509;306510;306511;306512;306513;306514 306502 1126 17 SGALDVLQMK Acetyl (Protein N-term) 1102.5692 0.56924534 875 P08865 RPSA 40S ribosomal protein SA yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.08 3.52 1 2 10 2 1 1 1 1 1 1 1 1 1 1 1 87.841 87.153 2 1.1776E-11 103349 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 162.97 122.9 891880000 249840000 562070000 0 4635800 3898800 8311500 3960200 7152400 0 0 0 16846000 9369000 25794000 0 46361 875 41578 388757;388758;388759;388760;388761;388762;388763;388764;388765;388766;388767;388768;388769 306515;306516;306517;306518;306519;306520;306521;306522;306523;306524;306525;306526;306527;306528 306518 14 SGALDVLQMKEEDVLK Acetyl (Protein N-term);Oxidation (M) 1831.9237 0.9237301 875 P08865 RPSA 40S ribosomal protein SA yes yes 1 1 1 By MS/MS By MS/MS 5 3.56 1 1 1 2 1 88.237 85.591 2 7.0422E-24 106188 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.52 89.111 64392000 0 58620000 0 0 0 0 0 0 0 0 0 0 0 0 5771200 46362 875 41579 388770;388771;388772 306529;306530;306531 306529 1126 2 SGALDVLQMKEEDVLK Acetyl (Protein N-term) 1815.9288 0.92881548 875 P08865 RPSA 40S ribosomal protein SA yes yes 1 0 1 By MS/MS By MS/MS 2.25 0.433 3 1 3 1 91.771 87.894 2;3 1.1976E-72 109122 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 234.82 211.58 182920000 0 182100000 817010 0 0 0 0 0 0 0 0 0 0 0 0 46363 875 41579 388773;388774;388775;388776 306532;306533;306534;306535 306532 4 SGALLACGIVNSGVR Unmodified 1472.7769 0.7769467 2252 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.929 72.983 2 0.0012434 83352 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.412 60.324 139760000 0 0 0 8166700 7607900 9702400 3138900 4965400 0 12507000 26423000 38009000 5119700 7866600 16249000 46364 2252 41580 388777;388778;388779;388780;388781;388782;388783;388784;388785;388786;388787;388788 306536;306537;306538;306539;306540;306541;306542;306543;306544 306538 8 SGALPQQYPASGENK Unmodified 1545.7423 0.74233534 4900 Q9UHF7 TRPS1 Zinc finger transcription factor Trps1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 35.089 35.245 2 5.3185E-07 37823 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 143.24 136.85 46988000 0 0 0 6656100 2989400 4300400 4720500 6992600 0 0 6109700 6273500 0 0 8945500 46365 4900 41581 388789;388790;388791;388792;388793;388794;388795;388796;388797 306545;306546;306547;306548;306549;306550;306551;306552 306547 7 SGANINRIK Unmodified 971.55123 0.55122751 2033 Q00341 HDLBP Vigilin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 17.021 13.641 2 0.0080072 19929 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 137.9 87.778 220490000 206210000 8672000 5606500 0 0 0 0 0 0 0 0 0 0 0 0 46366 2033 41582 388798;388799;388800 306553 306553 1 SGAQASSTPLSPTR Unmodified 1358.679 0.6790068 757 P02545 LMNA Prelamin-A/C;Lamin-A/C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 28.354 28.622 2 6.1975E-13 29638 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 109.39 97.821 282630000 0 0 0 33849000 0 0 0 0 0 0 0 0 44796000 64833000 139160000 46367 757 41583 388801;388802;388803;388804;388805;388806;388807;388808 306554;306555;306556;306557;306558;306559;306560;306561 306555 8 SGASEANLIVAK Unmodified 1158.6245 0.62445203 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 0 By MS/MS 10 0 1 1 45.191 45.243 2 0.016799 50923 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 42.336 23.242 3793700 0 0 0 0 0 3793700 0 0 0 0 0 0 0 0 0 46368 1492 41584 388809 306562 306562 1 SGASGPENFQVGSMPPAQQQITSGQMHR Oxidation (M) 2942.3399 0.33993746 5187 Q9Y490 TLN1 Talin-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 60.512 60.667 3 1.1621E-31 69177 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 82.849 76.051 87476000 0 0 0 4361500 0 10621000 6823100 0 0 11362000 11818000 13155000 0 12447000 16888000 46369 5187 41585 388810;388811;388812;388813;388814;388815;388816;388817 306563;306564;306565;306566;306567;306568;306569;306570;306571 306563 6568;6569 9 SGASGPENFQVGSMPPAQQQITSGQMHR Unmodified 2926.345 0.34502284 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 69.75 69.94 3 2.4822E-14 79616 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.264 38.102 37046000 0 0 0 0 0 6672400 0 0 0 5821400 5509500 0 4526800 0 14516000 46370 5187 41585 388818;388819;388820;388821;388822 306572;306573;306574;306575 306575 4 SGASGPENFQVGSMPPAQQQITSGQMHR 2 Oxidation (M) 2958.3349 0.33485209 5187 Q9Y490 TLN1 Talin-1 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 55.28 55.739 3 1.2377E-36 62521 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.881 82.347 102670000 0 0 0 0 0 0 0 0 0 39883000 0 40518000 0 0 22264000 46371 5187 41585 388823;388824;388825 306576;306577;306578;306579 306578 6568;6569 4 SGASLLSNMSR Unmodified 1121.5499 0.54990688 2346 Q13835 PKP1 Plakophilin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 53.007 52.908 2 0.00042336 59744 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 85.807 60.233 25782000 0 0 0 18466000 0 0 3112500 0 0 0 0 0 4203700 0 0 46372 2346 41586 388826;388827;388828;388829 306580;306581;306582 306581 2 SGASLLSNMSR Oxidation (M) 1137.5448 0.5448215 2346 Q13835 PKP1 Plakophilin-1 yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 31.512 31.421 2 0.004874 34503 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 93.111 71.647 45085000 0 0 0 13464000 0 0 0 31622000 0 0 0 0 0 0 0 46373 2346 41586 388830;388831 306583;306584 306583 3821 0 SGASSFGEK Unmodified 868.39266 0.39266118 5124 Q9Y2X0 MED16 Mediator of RNA polymerase II transcription subunit 16 yes yes 0 0 0 By MS/MS 2 0 1 1 12.231 8.9361 2 0.018051 12151 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.113 53.481 19025000 0 19025000 0 0 0 0 0 0 0 0 0 0 0 0 0 46374 5124 41587 388832 306585 306585 1 SGASSSEQNNNSYETK Acetyl (Protein N-term) 1743.7184 0.71836501 433 O60825 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase yes yes 1 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.31 2.4 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 18.858 20.345 2 1.2237E-50 17046 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 169.23 166.49 170830000 0 4259800 0 12076000 15879000 14936000 13703000 13232000 15031000 12300000 12177000 20242000 11665000 8994100 16340000 46375 433 41588 388833;388834;388835;388836;388837;388838;388839;388840;388841;388842;388843;388844;388845 306586;306587;306588;306589;306590;306591;306592;306593;306594;306595;306596;306597 306595 12 SGAVASLLSK Unmodified 931.53385 0.53384611 3063 Q7LFL8 CXXC5 CXXC-type zinc finger protein 5 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 51.927 51.966 2 0.017376 58568 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 48.998 9.6935 95796000 0 0 0 8997800 7554500 9560000 9242100 14764000 6801500 10653000 10705000 0 8172800 9344600 0 46376 3063 41589 388846;388847;388848;388849;388850;388851;388852;388853;388854;388855 306598;306599;306600;306601 306599 4 SGAVEETFR Unmodified 994.47197 0.47197413 2997 Q6YN16 HSDL2 Hydroxysteroid dehydrogenase-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 30.63 30.226 2 0.027409 33087 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 49.418 31.857 6884300 0 0 0 0 6884300 0 0 0 0 0 0 0 0 0 0 46377 2997 41590 388856;388857;388858;388859;388860 306602;306603;306604;306605;306606 306606 5 SGAVQGAGSLGPGSPVR Unmodified 1495.7743 0.77430417 4809 Q9P270 SLAIN2 SLAIN motif-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 45.36 45.617 2 0.00040877 51093 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 78.814 60.069 37456000 0 0 0 0 3658800 3926200 0 3432900 0 5137600 6198000 7156700 0 3542300 4403200 46378 4809 41591 388861;388862;388863;388864;388865;388866;388867;388868;388869 306607;306608;306609;306610;306611;306612;306613;306614 306610 7 SGAVTFSSQGR Unmodified 1095.5309 0.530886 535 O75717 WDHD1 WD repeat and HMG-box DNA-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 25.949 26.147 2 0.00093347 26555 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.228 54.097 75322000 0 0 0 0 6172100 7155800 8124800 0 6178900 6944700 10250000 0 9197200 7846200 13453000 46379 535 41592 388870;388871;388872;388873;388874;388875;388876;388877;388878;388879 306615;306616;306617;306618;306619;306620;306621;306622;306623;306624 306618 9 SGAWDESGVFIYTTSNHIK Unmodified 2110.996 0.99598384 1721 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 0 0 0 By MS/MS 2 0 1 1 86.1 77.97 3 7.1432E-06 101654 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.123 53.122 38127000 38127000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46380 1721 41593 388880 306625;306626 306626 2 SGAWGAQEAEMK Oxidation (M) 1279.5503 0.55030081 3321 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 yes yes 0 1 0 By MS/MS 2 0 1 1 29.851 25.457 2 0.0030118 33335 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.706 69.343 11985000 0 11985000 0 0 0 0 0 0 0 0 0 0 0 0 0 46381 3321 41594 388881 306627 306627 4912 1 SGAYLIPLLER Unmodified 1230.6972 0.69722304 1199 P26196 DDX6 Probable ATP-dependent RNA helicase DDX6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 88.131 88.2 2 0.00042721 102138 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 85.676 81.377 121300000 0 0 0 1971700 3427800 12217000 4143800 8502400 6717300 11571000 7669500 10982000 7972000 10619000 35502000 46382 1199 41595 388882;388883;388884;388885;388886;388887;388888;388889;388890;388891;388892;388893 306628;306629;306630;306631;306632;306633;306634;306635;306636;306637;306638;306639;306640 306635 13 SGCALTDAVAPGNK Unmodified 1359.6453 0.64526383 4089 Q9BQ70 TCF25 Transcription factor 25 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.751 42.927 2 0.0005846 47950 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 84.198 78.556 310840000 0 0 0 21325000 15104000 26017000 24134000 16507000 20456000 24687000 32168000 31641000 28774000 23429000 46595000 46383 4089 41596 388894;388895;388896;388897;388898;388899;388900;388901;388902;388903;388904;388905 306641;306642;306643;306644;306645;306646;306647;306648;306649;306650;306651;306652;306653 306647 13 SGCEGHLPWPNGICTK Unmodified 1811.8083 0.80832319 3476 Q8TAT6 NPLOC4 Nuclear protein localization protein 4 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 75.794 67.663 3 0.0067194 89275 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 30.107 28.741 18510000 18510000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46384 3476 41597 388906 306654 306654 1 SGCENPPIVSK Unmodified 1186.5652 0.56522259 592 O94842 TOX4 TOX high mobility group box family member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 27.998 28.181 2 0.0015323 30155 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 72.096 43.887 110280000 0 0 0 7648200 9705600 6977800 8890200 8552900 8342500 10756000 16184000 14491000 0 12298000 6436100 46385 592 41598 388907;388908;388909;388910;388911;388912;388913;388914;388915;388916;388917 306655;306656;306657;306658;306659;306660;306661;306662;306663;306664;306665;306666 306660 12 SGCIPENHGEDMRK Unmodified 1628.7035 0.70352376 5258 Q9Y606 PUS1 tRNA pseudouridine synthase A, mitochondrial yes yes 0 0 1 By MS/MS 2 0 1 1 20.104 17.39 3 0.020588 22197 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 38.189 33.388 3384300 0 0 3384300 0 0 0 0 0 0 0 0 0 0 0 0 46386 5258 41599 388918 306667 306667 0 SGCIVNNLAEFTVDPK Unmodified 1762.856 0.85598488 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8 3.28 1 2 8 1 2 1 1 1 1 1 1 1 1 84.621 83.36 2;3 3.9847E-21 96561 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 116.84 103.86 102160000 12216000 24495000 0 0 2271300 5316100 2416100 0 0 9890300 8785700 9493500 0 5969900 21304000 46387 487 41600 388919;388920;388921;388922;388923;388924;388925;388926;388927;388928;388929 306668;306669;306670;306671;306672;306673;306674;306675;306676 306670 8 SGCNSASSTPDSTR Unmodified 1425.579 0.57903476 3621 Q92547 TOPBP1 DNA topoisomerase 2-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 6.8463 6.9889 2 0.00062623 4481 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.653 74.04 23429000 0 0 0 0 2209300 2580900 1794200 2378100 1961800 2336600 3846200 0 0 2204400 4117300 46388 3621 41601 388930;388931;388932;388933;388934;388935;388936;388937;388938;388939 306677;306678;306679;306680;306681;306682 306679 6 SGCSDLEEAVDSGADK Unmodified 1638.6679 0.66790934 3615 Q92538 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 2 1 2 1 1 1 2 46.392 46.53 2;3 1.066E-05 54963 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 84.365 80.692 5234900000 0 0 0 668560000 517960000 602800000 497520000 0 0 1095000000 908830000 940110000 0 0 4092400 46389 3615 41602 388940;388941;388942;388943;388944;388945;388946;388947;388948;388949;388950;388951;388952 306683;306684;306685;306686;306687;306688;306689 306688 7 SGCSDLEEAVDSGADKK Unmodified 1766.7629 0.76287236 3615 Q92538 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.64 2.9 1 1 9 2 1 1 1 1 1 1 1 1 1 44.187 43.362 3 0.010398 48260 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 17.648 11.485 154050000 0 86702000 0 6146400 4555900 0 7393800 6858800 0 6179400 0 12532000 5767400 4952400 12964000 46390 3615 41603 388953;388954;388955;388956;388957;388958;388959;388960;388961;388962;388963 306690;306691;306692;306693 306692 3 SGCSEAQPPESPETR Unmodified 1630.6893 0.68931349 5273 Q9Y6A5 TACC3 Transforming acidic coiled-coil-containing protein 3 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 23.879 24.293 2 0.00057114 24826 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.408 53.455 5313800 0 0 0 0 0 0 0 1217500 0 0 0 0 0 0 4096200 46391 5273 41604 388964;388965 306694 306694 1 SGCTSLTPGPNCDRFK Unmodified 1795.7982 0.79815243 4731 Q9NXR7 BRE BRCA1-A complex subunit BRE yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 46.799 40.979 3 0.0005834 56636 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.265 42.666 116020000 104070000 0 11954000 0 0 0 0 0 0 0 0 0 0 0 0 46392 4731 41605 388966;388967 306695;306696 306695 2 SGDAAIVDMVPGK Oxidation (M) 1274.6177 0.61765209 1960 P68104;Q5VTE0 EEF1A1;EEF1A1P5 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3 yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.35 3.22 2 23 5 114 5 22 3 3 7 16 13 8 11 7 9 8 8 15 9 57.231 56.359 2;3 1.0314E-16 54582 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 133.89 117.18 33962000000 555830000 4375000000 47826000 1572800000 1226900000 3873900000 1885000000 1547600000 2715500000 3088300000 2725100000 2490100000 2945800000 2155300000 2757000000 46393 1960 41606 388968;388969;388970;388971;388972;388973;388974;388975;388976;388977;388978;388979;388980;388981;388982;388983;388984;388985;388986;388987;388988;388989;388990;388991;388992;388993;388994;388995;388996;388997;388998;388999;389000;389001;389002;389003;389004;389005;389006;389007;389008;389009;389010;389011;389012;389013;389014;389015;389016;389017;389018;389019;389020;389021;389022;389023;389024;389025;389026;389027;389028;389029;389030;389031;389032;389033;389034;389035;389036;389037;389038;389039;389040;389041;389042;389043;389044;389045;389046;389047;389048;389049;389050;389051;389052;389053;389054;389055;389056;389057;389058;389059;389060;389061;389062;389063;389064;389065;389066;389067;389068;389069;389070;389071;389072;389073;389074;389075;389076;389077;389078;389079;389080;389081;389082;389083;389084;389085;389086;389087;389088;389089;389090;389091;389092;389093;389094;389095;389096;389097;389098;389099;389100;389101;389102;389103;389104;389105;389106;389107;389108;389109;389110;389111 306697;306698;306699;306700;306701;306702;306703;306704;306705;306706;306707;306708;306709;306710;306711;306712;306713;306714;306715;306716;306717;306718;306719;306720;306721;306722;306723;306724;306725;306726;306727;306728;306729;306730;306731;306732;306733;306734;306735;306736;306737;306738;306739;306740;306741;306742;306743;306744;306745;306746;306747;306748;306749;306750;306751;306752;306753;306754;306755;306756;306757;306758;306759;306760;306761;306762;306763;306764;306765;306766;306767;306768;306769;306770;306771;306772;306773;306774;306775;306776;306777;306778;306779;306780;306781;306782;306783;306784;306785;306786;306787;306788;306789;306790;306791;306792;306793;306794;306795;306796;306797;306798;306799;306800;306801;306802;306803;306804;306805;306806;306807;306808;306809;306810;306811;306812;306813;306814;306815;306816;306817;306818;306819;306820;306821;306822;306823;306824;306825;306826;306827 306824 3150 114 SGDAAIVDMVPGK Unmodified 1258.6227 0.62273747 1960 P68104;Q5VTE0 EEF1A1;EEF1A1P5 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.9 3.57 2 5 1 23 3 4 1 2 2 2 1 2 2 2 2 2 2 2 2 70.214 69.572 2;3 8.6293E-18 94066 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 129.16 113.27 30588000000 379120000 9645600000 28488000 731850000 782150000 2686500000 970560000 1270000000 1436900000 1926200000 1902100000 1863000000 1583900000 1803700000 3577700000 46394 1960 41606 389112;389113;389114;389115;389116;389117;389118;389119;389120;389121;389122;389123;389124;389125;389126;389127;389128;389129;389130;389131;389132;389133;389134;389135;389136;389137;389138;389139;389140;389141;389142 306828;306829;306830;306831;306832;306833;306834;306835;306836;306837;306838;306839;306840;306841;306842;306843;306844;306845;306846;306847;306848;306849;306850;306851;306852;306853;306854;306855;306856;306857;306858;306859;306860;306861;306862;306863;306864;306865 306850 35 SGDAAIVDMVPGKPMCVESFSDYPPLGR 2 Oxidation (M) 3026.3824 0.38237913 1960 P68104;Q5VTE0 EEF1A1;EEF1A1P5 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3 yes no 0 2 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 25 1 1 2 1 3 2 2 2 3 2 1 5 81.844 81.954 3;4 1.5259E-126 93874 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 160.67 154.57 9794800000 0 0 0 75558000 316460000 419850000 190380000 949090000 337970000 1598700000 1470500000 1278600000 297810000 519720000 2340200000 46395 1960 41607 389143;389144;389145;389146;389147;389148;389149;389150;389151;389152;389153;389154;389155;389156;389157;389158;389159;389160;389161;389162;389163;389164;389165;389166;389167 306866;306867;306868;306869;306870;306871;306872;306873;306874;306875;306876;306877;306878;306879;306880;306881;306882;306883;306884;306885;306886;306887;306888;306889;306890;306891;306892;306893;306894;306895;306896;306897;306898;306899;306900;306901;306902;306903;306904;306905 306904 3149;3150 38 SGDAAIVDMVPGKPMCVESFSDYPPLGR Oxidation (M) 3010.3875 0.38746451 1960 P68104;Q5VTE0 EEF1A1;EEF1A1P5 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3 yes no 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 2 1 1 1 2 3 2 2 2 3 85.217 85.288 3;4 5.7142E-101 97733 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 129.5 127.05 718690000 0 0 0 7732000 8116600 3848900 1536100 40552000 0 137400000 84426000 47883000 0 19599000 367600000 46396 1960 41607 389168;389169;389170;389171;389172;389173;389174;389175;389176;389177;389178;389179;389180;389181;389182;389183;389184;389185;389186 306906;306907;306908;306909;306910;306911;306912;306913;306914;306915;306916;306917;306918;306919;306920;306921;306922;306923;306924;306925;306926;306927 306909 3149;3150 22 SGDAAIVDMVPGKPMCVESFSDYPPLGR Unmodified 2994.3925 0.39254989 1960 P68104;Q5VTE0 EEF1A1;EEF1A1P5 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3 yes no 0 0 1 By MS/MS By MS/MS 10 0 3 1 2 89.202 89.33 3 7.0341E-43 103380 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.887 90.921 23873000 0 0 0 0 0 0 0 0 0 5727800 0 0 0 0 18145000 46397 1960 41607 389187;389188;389189 306928;306929;306930;306931 306930 4 SGDELQDELFELLGPEGLELIEK Unmodified 2572.2796 0.27959507 3320 Q8N3C0 ASCC3 Activating signal cointegrator 1 complex subunit 3 yes yes 0 0 0 By MS/MS 2 0 1 1 103.52 95.387 3 7.9462E-19 122583 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.3 95.945 15431000 15431000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46398 3320 41608 389190 306932 306932 1 SGDEMIFDPTMSK Acetyl (Protein N-term);2 Oxidation (M) 1530.6218 0.62181077 1099 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 1 2 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 66.275 66.415 2 0.00032069 76132 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 57.174 54.035 4260500 0 0 0 0 0 0 4260500 0 0 0 0 0 0 0 0 46399 1099 41609 389191;389192;389193 306933;306934;306935 306933 1576;1577 3 SGDEMIFDPTMSK Acetyl (Protein N-term) 1498.632 0.63198153 1099 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 1 0 0 By MS/MS By MS/MS 1 0 2 1 1 104.53 107.61 2 0.00049395 97106 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 82.171 75.638 14752000 7640300 7112000 0 0 0 0 0 0 0 0 0 0 0 0 0 46400 1099 41609 389194;389195 306936;306937 306937 2 SGDEMIFDPTMSK Acetyl (Protein N-term);Oxidation (M) 1514.6269 0.62689615 1099 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 1 1 0 By MS/MS 1 0 1 1 103.39 108.65 2 1.0867E-06 88738 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 101.95 91.431 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46401 1099 41609 389196 306938 306938 1576;1577 1 SGDETPGSEVPGDK Unmodified 1373.5947 0.59466805 2645 Q1KMD3 HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 22.96 23.125 2 1.6232E-05 24123 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 109.72 102.34 376720000 0 0 0 25756000 30044000 21735000 29351000 23570000 14670000 39943000 30421000 53217000 58987000 49026000 0 46402 2645 41610 389197;389198;389199;389200;389201;389202;389203;389204;389205;389206;389207 306939;306940;306941;306942;306943;306944;306945;306946 306944 8 SGDGANAGGLVAAIAPK Unmodified 1467.7682 0.76815616 240 O15014 ZNF609 Zinc finger protein 609 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 73.413 73.423 2 4.8433E-08 84942 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 78.548 65.195 35703000 0 0 0 5458500 0 0 5407100 6606500 0 9789500 0 0 0 8440800 0 46403 240 41611 389208;389209;389210;389211;389212;389213;389214;389215 306947;306948;306949;306950;306951;306952;306953 306952 7 SGDGATEQAAEYVPEK Acetyl (Protein N-term) 1692.7479 0.74787422 2222 Q12996 CSTF3 Cleavage stimulation factor subunit 3 yes yes 1 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.18 2.59 1 10 1 1 1 1 1 1 1 1 1 1 1 61.158 61.777 2 1.0347E-10 64389 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 122.55 108.13 105280000 21656000 0 0 8726700 6216600 10544000 6874100 0 4804200 0 11137000 13525000 7366900 0 14426000 46404 2222 41612 389216;389217;389218;389219;389220;389221;389222;389223;389224;389225;389226 306954;306955;306956;306957;306958;306959;306960 306955 7 SGDGEGTPVEHVR Unmodified 1338.6164 0.61640654 3050 Q7L576 CYFIP1 Cytoplasmic FMR1-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 18.667 18.208 2;3 0.0033188 18496 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 49.333 44.439 147420000 0 8074300 0 11386000 10207000 13360000 10994000 11353000 6922400 14244000 0 16767000 13107000 11352000 19649000 46405 3050 41613 389227;389228;389229;389230;389231;389232;389233;389234;389235;389236;389237;389238;389239 306961;306962;306963;306964;306965 306965 4 SGDGEGTPVEHVRCFQPPIHQSLASS Unmodified 2791.2984 0.29839023 3050 Q7L576 CYFIP1 Cytoplasmic FMR1-interacting protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 76.144 68.014 3 0.0012059 89563 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 34.839 24.131 24982000 24982000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46406 3050 41614 389240 306966 306966 1 SGDGITFGVFGSK Unmodified 1270.6194 0.61936665 448 O60934 NBN Nibrin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 79.458 78.936 2 6.9025E-05 97931 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.539 85.96 195150000 0 90517000 0 3345200 4667000 7707100 5628500 7882200 5325500 10703000 12183000 9384000 7822300 9276800 20704000 46407 448 41615 389241;389242;389243;389244;389245;389246;389247;389248;389249;389250;389251;389252;389253;389254 306967;306968;306969;306970;306971;306972;306973;306974;306975;306976;306977;306978;306979;306980;306981;306982;306983 306971 16 SGDLGDMEPLK Oxidation (M) 1176.5333 0.53325376 426 O60716 CTNND1 Catenin delta-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 35.192 35.648 2 0.0019957 38806 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 79.148 61.908 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46408 426 41616 389255;389256;389257;389258;389259 306984;306985;306986;306987;306988 306988 541 5 SGDLGDMEPLK Unmodified 1160.5383 0.53833914 426 O60716 CTNND1 Catenin delta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.394 55.524 2 0.026126 63103 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 34.692 19.542 90077000 0 0 0 6202000 5816500 7074100 6760700 7325200 5309000 8243300 8856400 9279200 5787600 7310400 12113000 46409 426 41616 389260;389261;389262;389263;389264;389265;389266;389267;389268;389269;389270;389271 306989 306989 1 SGDLYVLAADK Unmodified 1150.587 0.58700389 4626 Q9NSE4 IARS2 Isoleucine--tRNA ligase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 66.587 61.753 2 0.020823 78800 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.592 32.653 94919000 0 92177000 2742000 0 0 0 0 0 0 0 0 0 0 0 0 46410 4626 41617 389272;389273 306990 306990 1 SGDMTLIPEQEPMEIDSEPGVENVFEVSK 2 Oxidation (M) 3237.4581 0.45810607 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 2 0 By MS/MS 2.5 0.5 1 1 2 89.761 85.707 3 1.6656E-08 106357 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.349 56.067 30418000 0 30418000 0 0 0 0 0 0 0 0 0 0 0 0 0 46411 3443 41618 389274;389275 306991;306992 306991 4985;4986 2 SGDMTLIPEQEPMEIDSEPGVENVFEVSK Oxidation (M) 3221.4632 0.46319145 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 1 0 By MS/MS 2 0 1 1 93.38 88.469 3 3.8784E-09 109860 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 63.085 57.305 12910000 0 12910000 0 0 0 0 0 0 0 0 0 0 0 0 0 46412 3443 41618 389276 306993 306993 4985;4986 1 SGDMTLIPEQEPMEIDSEPGVENVFEVSK Unmodified 3205.4683 0.46827683 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 0 By MS/MS 2 0 1 1 96.227 91.406 3 6.0762E-07 113290 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 50.705 45.044 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46413 3443 41618 389277 306994 306994 1 SGDNLAEENSRDENR Unmodified 1704.7299 0.72993275 4401 Q9H4L5 OSBPL3 Oxysterol-binding protein-related protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.112 13.267 3 1.5191E-27 12527 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 136.33 133.69 135480000 0 0 0 9368900 12800000 10020000 8875900 6619700 6862900 20378000 12952000 9239000 13445000 9707100 15208000 46414 4401 41619 389278;389279;389280;389281;389282;389283;389284;389285;389286;389287;389288;389289 306995;306996;306997;306998;306999;307000;307001;307002;307003;307004;307005;307006;307007;307008 306996 14 SGDPGPGPSHPAQPK Unmodified 1427.6793 0.67934115 3186 Q86WR7 PROSER2 Proline and serine-rich protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.137 13.293 3 0.00080276 12367 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 57.328 42.975 267820000 0 0 0 18199000 20149000 22310000 18830000 17515000 13869000 30731000 25679000 26754000 21957000 19124000 32707000 46415 3186 41620 389290;389291;389292;389293;389294;389295;389296;389297;389298;389299;389300;389301 307009;307010;307011;307012;307013;307014;307015;307016;307017;307018 307018 9 SGDPRPQAAEPPDHLTITR Unmodified 2057.029 0.029015303 2759 Q5SW79;Q96L14 CEP170;CEP170P1 Centrosomal protein of 170 kDa;Cep170-like protein yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 2 2 1 2 2 2 2 2 47.557 47.778 3;4 5.8849E-06 53744 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 53.779 48.777 262440000 0 0 0 0 12994000 32679000 31310000 21218000 19709000 40169000 30689000 39144000 34527000 0 0 46416 2759 41621 389302;389303;389304;389305;389306;389307;389308;389309;389310;389311;389312;389313;389314;389315;389316;389317 307019;307020;307021;307022;307023;307024;307025;307026;307027;307028;307029;307030 307019 10 SGDQNWVSVSR Unmodified 1233.5738 0.57381344 4326 Q9H0E9 BRD8 Bromodomain-containing protein 8 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 43.668 43.747 2 0.00053665 48703 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 82.029 68.22 60727000 0 0 0 5093700 4443400 0 8009500 9862000 0 10932000 10468000 11919000 0 0 0 46417 4326 41622 389318;389319;389320;389321;389322;389323;389324;389325;389326;389327 307031;307032;307033;307034;307035;307036;307037 307034 7 SGDSEVYQLGDVSQK Unmodified 1610.7424 0.74239491 2107 Q04837 SSBP1 Single-stranded DNA-binding protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 53.964 54.225 2 1.0509E-28 61266 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 143.79 133.78 44608000 0 0 0 0 3524700 0 0 2752000 0 0 6926900 7774000 0 6412200 17218000 46418 2107 41623 389328;389329;389330;389331;389332;389333;389334;389335 307038;307039;307040;307041;307042;307043;307044 307040 7 SGDSGGGMYVINLHK Unmodified 1533.7246 0.72457678 4161 Q9BUI4 POLR3C DNA-directed RNA polymerase III subunit RPC3 yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 65.531 59.505 3 0.017409 79712 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 22.365 18.532 9232300 7680300 0 1552000 0 0 0 0 0 0 0 0 0 0 0 0 46419 4161 41624 389336;389337 307045 307045 1 SGDSHLGGGSREGSFK Unmodified 1576.723 0.72299688 4672 Q9NVM9 ASUN Protein asunder homolog yes yes 0 0 1 By MS/MS By MS/MS 2 0 4 2 2 19.829 16.168 2;3 4.2056E-51 23154 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 166.6 144.61 160630000 156450000 0 4183500 0 0 0 0 0 0 0 0 0 0 0 0 46420 4672 41625 389338;389339;389340;389341 307046;307047;307048 307048 3 SGDSIQQHVK Unmodified 1097.5465 0.54653606 637 O95263 PDE8B High affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 11.177 11.271 2 0.0022833 10102 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 85.064 62.978 17085000 0 0 0 880800 1081500 1858000 2141100 1493400 1540000 2133000 0 0 2557300 1525100 1875200 46421 637 41626 389342;389343;389344;389345;389346;389347;389348;389349;389350;389351;389352;389353 307049;307050;307051;307052;307053;307054 307051 6 SGDVATGLK Unmodified 846.4447 0.44469675 2933 Q6P3X3 TTC27 Tetratricopeptide repeat protein 27 yes yes 0 0 0 By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 2 18.192 18.449 2 0.020004 18550 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 53.493 4.3967 52186000 0 0 0 0 1665400 4526600 3130900 2482600 0 4593200 3498500 3094400 2250200 3509100 23436000 46422 2933 41627 389354;389355;389356;389357;389358;389359;389360;389361;389362;389363;389364 307055;307056;307057;307058 307057 4 SGDYYVTVVEDVTLGQIVATATLIIEHK Unmodified 3033.591 0.59103322 3814 Q96EK6 GNPNAT1 Glucosamine 6-phosphate N-acetyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.5 0.5 2 2 2 1 1 106.49 101.76 3 2.6043E-07 126765 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.857 48.513 9273400 5832800 1647300 1793300 0 0 0 0 0 0 0 0 0 0 0 0 46423 3814 41628 389365;389366;389367;389368 307059;307060;307061;307062;307063 307061 5 SGEDEQQEQTIAEDLVVTK Acetyl (Protein N-term) 2160.007 0.007002036 5067 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 8.76 3.04 2 1 18 1 2 2 2 1 1 2 2 1 2 1 2 2 84.768 84.878 2;3 1.1308E-179 95540 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 274.24 250.17 522690000 111650000 209090000 0 3486600 5446100 2257500 2825900 5857500 4315200 3392700 31998000 11504000 0 29566000 101300000 46424 5067 41629 389369;389370;389371;389372;389373;389374;389375;389376;389377;389378;389379;389380;389381;389382;389383;389384;389385;389386;389387;389388;389389 307064;307065;307066;307067;307068;307069;307070;307071;307072 307065 8 SGEEDEEILFK Unmodified 1294.5929 0.59287713 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 63.979 62.965 2 1.6058E-05 72325 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 134.51 115.73 254720000 12027000 102920000 0 12406000 6922500 14953000 10515000 11361000 7511400 0 16179000 17036000 11872000 13645000 17374000 46425 1601 41630 389390;389391;389392;389393;389394;389395;389396;389397;389398;389399;389400;389401;389402 307073;307074;307075;307076;307077;307078;307079;307080;307081;307082;307083;307084;307085;307086 307083 12 SGEEDFESLASQFSDCSSAK Unmodified 2179.8852 0.88517234 2309 Q13526 PIN1 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.2 3.82 3 2 5 1 3 1 2 1 2 83.764 81.677 2;3 5.897E-239 100617 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 303.47 302.32 727210000 10888000 678280000 1149000 0 0 0 0 0 0 0 6630200 6321500 0 0 23949000 46426 2309 41631 389403;389404;389405;389406;389407;389408;389409;389410;389411;389412 307087;307088;307089;307090;307091;307092;307093 307087 7 SGEENPASKPTPVQDVQGDGR Acetyl (Protein N-term) 2209.0247 0.024717786 2497 Q15102 PAFAH1B3 Platelet-activating factor acetylhydrolase IB subunit gamma yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 15 1 2 1 2 2 1 1 1 2 2 42.71 42.967 2;3 8.4175E-72 48218 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 173.03 165.12 210520000 0 0 0 5237000 0 37532000 10124000 8353700 0 16026000 9134100 27281000 5947200 20520000 70363000 46427 2497 41632 389413;389414;389415;389416;389417;389418;389419;389420;389421;389422;389423;389424;389425;389426;389427 307094;307095;307096;307097;307098;307099;307100;307101;307102;307103;307104;307105 307095 12 SGEGEVSGLMR Unmodified 1120.5183 0.5182724 2262 Q13263 TRIM28 Transcription intermediary factor 1-beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.308 43.483 2 1.0939E-36 47462 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 179.51 138.48 710560000 0 0 0 45966000 40998000 60301000 35294000 46878000 33873000 57874000 70861000 87517000 61237000 62935000 106830000 46428 2262 41633 389428;389429;389430;389431;389432;389433;389434;389435;389436;389437;389438;389439 307106;307107;307108;307109;307110;307111;307112;307113;307114;307115;307116;307117;307118 307110 11 SGEGEVSGLMR Oxidation (M) 1136.5132 0.51318702 2262 Q13263 TRIM28 Transcription intermediary factor 1-beta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.591 26.791 2 0.00011593 28670 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 108.15 97.733 413070000 0 0 0 32751000 21521000 35437000 34807000 20215000 20175000 37199000 37398000 77179000 39499000 24610000 32275000 46429 2262 41633 389440;389441;389442;389443;389444;389445;389446;389447;389448;389449;389450;389451 307119;307120;307121;307122;307123;307124;307125;307126;307127;307128;307129;307130 307125 3692 10 SGEGEVSGLMRK Unmodified 1248.6132 0.61323542 2262 Q13263 TRIM28 Transcription intermediary factor 1-beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 25 3 2 2 2 2 2 2 2 2 2 2 2 34.744 34.9 2;3 2.4754E-05 37693 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 89.189 73.811 809530000 0 0 0 70250000 29086000 54963000 51668000 45003000 49775000 69358000 85686000 66690000 95603000 63849000 127590000 46430 2262 41634 389452;389453;389454;389455;389456;389457;389458;389459;389460;389461;389462;389463;389464;389465;389466;389467;389468;389469;389470;389471;389472;389473;389474;389475;389476 307131;307132;307133;307134;307135;307136;307137;307138;307139;307140;307141;307142;307143;307144;307145 307138 12 SGEGEVSGLMRK Oxidation (M) 1264.6082 0.60815004 2262 Q13263 TRIM28 Transcription intermediary factor 1-beta yes yes 0 1 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 2 1 1 2 19.073 19.357 2;3 0.0019558 18596 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.423 23.986 194230000 0 0 0 17636000 1191100 15464000 0 0 14425000 23102000 20223000 38074000 18806000 15088000 30216000 46431 2262 41634 389477;389478;389479;389480;389481;389482;389483;389484;389485;389486;389487;389488 307146;307147;307148;307149 307146 3692 1 SGEGSQHPFGAMNIVR Unmodified 1685.7944 0.79438768 2700 Q53FT3 C11orf73 Protein Hikeshi yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 59.367 59.74 3 0.030058 67221 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 19.39 10.111 30458000 0 0 0 0 0 0 0 4225400 0 0 4289700 6614800 0 3544900 11784000 46432 2700 41635 389489;389490;389491;389492;389493 307150 307150 1 SGEHDFGAAFDGDGDRNMILGK Oxidation (M) 2324.0128 0.012772891 1380 P36871 PGM1 Phosphoglucomutase-1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 70.062 65.661 4 6.2017E-10 86391 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.42 82.083 310320000 277920000 28996000 3402300 0 0 0 0 0 0 0 0 0 0 0 0 46433 1380 41636 389494;389495;389496;389497 307151;307152 307152 2144 1 SGEHDFGAAFDGDGDRNMILGK Unmodified 2308.0179 0.017858269 1380 P36871 PGM1 Phosphoglucomutase-1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 79.004 70.874 3 6.1009E-41 93039 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.44 90.279 58487000 58487000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46434 1380 41636 389498;389499 307153;307154 307154 2 SGEIPSEQHPGASASPPCASPPVSAPASWDFGVPQR Unmodified 3656.6954 0.6954085 2139 Q07687 DLX2 Homeobox protein DLX-2 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 81.724 81.898 4 0.0061387 94513 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 17.543 15.56 14130000 0 0 0 0 0 0 0 0 0 0 0 5414600 0 0 8715300 46435 2139 41637 389500;389501 307155 307155 1 SGEISLPIK Unmodified 942.5386 0.53859714 4995 Q9ULH7 MKL2 MKL/myocardin-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 65.8 65.44 2 0.018368 83974 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.732 50.612 324710000 0 226450000 0 4930100 4746700 6093900 5232600 6727200 6749300 9525600 8670000 10005000 9301100 12362000 13918000 46436 4995 41638 389502;389503;389504;389505;389506;389507;389508;389509;389510;389511;389512;389513;389514 307156;307157;307158 307157 3 SGEISLPIKEEPSPISK Unmodified 1809.9724 0.97239485 4995 Q9ULH7 MKL2 MKL/myocardin-like protein 2 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 77.18 73.053 3 0.016865 87479 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 34.498 28.603 23529000 0 23529000 0 0 0 0 0 0 0 0 0 0 0 0 0 46437 4995 41639 389515;389516 307159 307159 1 SGELAQEYDK Unmodified 1138.5142 0.51423288 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 1 1 1 1 1 3 1 25.209 25.43 2 7.4903E-08 25877 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 152.11 91.522 294300000 0 0 0 17762000 13736000 21559000 20367000 18222000 13963000 27506000 18126000 27476000 24696000 53604000 37284000 46438 2431 41640 389517;389518;389519;389520;389521;389522;389523;389524;389525;389526;389527;389528;389529;389530 307160;307161;307162;307163;307164;307165;307166;307167;307168;307169 307166 10 SGELQGGPDDNLIEGGGTK Unmodified 1842.8595 0.85954994 3733 Q96A65 EXOC4 Exocyst complex component 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.5 55.626 2 2.1785E-08 62828 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 82.55 72.361 118120000 0 0 0 7057500 7370100 9757400 7006900 8703000 6370300 11563000 12197000 13019000 11829000 9530200 13720000 46439 3733 41641 389531;389532;389533;389534;389535;389536;389537;389538;389539;389540;389541;389542 307170;307171;307172;307173;307174;307175;307176;307177;307178;307179;307180;307181;307182 307180 13 SGENANIQPNIQLILR Unmodified 1778.9639 0.96389585 500 O75448 MED24 Mediator of RNA polymerase II transcription subunit 24 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 84.918 85.062 2 2.297E-06 98755 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 83 65.974 20821000 0 0 0 0 0 0 0 0 0 3387500 2946900 5861400 0 3124900 5500800 46440 500 41642 389543;389544;389545;389546;389547 307183;307184;307185;307186;307187 307187 5 SGEPGQTSVAPPPEEVEPGSGVR Acetyl (Protein N-term) 2304.087 0.086983691 4117 Q9BRT3 MIEN1 Migration and invasion enhancer 1 yes yes 1 0 0 By MS/MS 1 0 1 1 99.344 104.61 3 0.00060594 83801 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 46.178 42.738 6158800 6158800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46441 4117 41643 389548 307188 307188 1 SGEPLCPPLLCNQDK Unmodified 1726.8018 0.80184082 4680 Q9NVR5 DNAAF2 Protein kintoun yes yes 0 0 0 By MS/MS 2 0 1 1 76.213 71.375 2 0.027059 89218 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 52.071 28.696 16112000 0 16112000 0 0 0 0 0 0 0 0 0 0 0 0 0 46442 4680 41644 389549 307189 307189 1 SGEQCSVEPDLISK Unmodified 1547.7137 0.71373732 3315 Q8N201 INTS1 Integrator complex subunit 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 51.67 51.93 2 0.00047408 57815 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 69.451 55.293 18105000 0 0 0 0 0 2564500 0 2374000 0 4185400 0 0 0 4191800 4788900 46443 3315 41645 389550;389551;389552;389553;389554;389555 307190;307191;307192;307193 307193 4 SGEQIFTQDVRPEQLLEGK Unmodified 2173.1015 0.10151154 3588 Q8WXE0 CASKIN2 Caskin-2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 80.631 80.8 3 4.6688E-06 93056 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.334 65.682 28272000 0 0 0 0 0 0 0 0 0 6836300 4276500 0 0 0 17159000 46444 3588 41646 389556;389557;389558 307194;307195;307196 307195 2 SGEQVPLLLK Unmodified 1082.6336 0.63356015 4359 Q9H269 VPS16 Vacuolar protein sorting-associated protein 16 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 72.194 72.262 2 0.017731 83097 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 48.794 32.018 60015000 0 0 0 5130500 4745100 0 4543900 0 3369400 6856700 6742000 6362700 6542700 6751900 8969700 46445 4359 41647 389559;389560;389561;389562;389563;389564;389565;389566;389567;389568 307197;307198;307199;307200 307197 3 SGERPVTAGEEDEQVPDSIDAR Unmodified 2356.0779 0.077875568 5160 Q9Y3D0 FAM96B Mitotic spindle-associated MMXD complex subunit MIP18 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 2 1 1 49.431 49.608 3 2.7276E-43 55735 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 109.75 103.09 165470000 0 0 0 0 13548000 0 17318000 11367000 0 18271000 41824000 0 0 28242000 34896000 46446 5160 41648 389569;389570;389571;389572;389573;389574;389575;389576;389577;389578 307201;307202;307203;307204;307205;307206;307207;307208;307209;307210 307205 10 SGESARSLGK Acetyl (Protein N-term) 1032.52 0.51998696 1984 P78417 GSTO1 Glutathione S-transferase omega-1 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS 2 0.632 1 3 1 2 2 1 35.245 33.527 2 6.29E-06 93400 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 132.39 80.527 1282500000 99970000 1166500000 16062000 0 0 0 0 0 0 0 0 0 0 0 0 46447 1984 41649 389579;389580;389581;389582;389583 307211;307212;307213;307214 307213 3 SGESNTHQDIEEK Unmodified 1472.6379 0.63792984 573 O76031 CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.497 7.6241 3 4.1232E-08 5626 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 100.22 87.954 90892000 0 0 0 3420200 3766400 5171500 6035900 7336200 5037900 5117900 19640000 11506000 5891100 8134800 9834600 46448 573 41650 389584;389585;389586;389587;389588;389589;389590;389591;389592;389593;389594;389595 307215;307216;307217;307218;307219;307220;307221;307222;307223;307224;307225;307226;307227 307222 13 SGESSSQLSQEQK Unmodified 1393.6321 0.63211618 2999 Q6ZMI0 PPP1R21 Protein phosphatase 1 regulatory subunit 21 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 10.856 11.041 2 0.013088 9077 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.092 33.228 5366800 0 0 0 0 0 798800 0 0 0 816630 0 0 969560 621640 2160100 46449 2999 41651 389596;389597;389598;389599;389600 307228 307228 1 SGETEPFLK Unmodified 1006.4971 0.49712625 3155 Q86UU0 BCL9L B-cell CLL/lymphoma 9-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 43.89 44.195 2 0.0033124 49967 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 93.429 74.069 133680000 0 0 0 0 0 19181000 0 0 18896000 25968000 23570000 17137000 0 28923000 0 46450 3155 41652 389601;389602;389603;389604;389605;389606;389607 307229;307230;307231;307232;307233;307234;307235;307236 307229 8 SGEVAEGEAR Unmodified 1003.4571 0.45705235 134 O00257 CBX4 E3 SUMO-protein ligase CBX4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 7.9471 8.0433 2 0.029134 5558 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.442 8.1468 17608000 0 0 0 870630 1137900 2302100 1473100 2348100 0 0 0 2634200 1882300 2089700 2869700 46451 134 41653 389608;389609;389610;389611;389612;389613;389614;389615;389616 307237;307238;307239 307238 3 SGEVAEGEARSPSHK Unmodified 1539.7277 0.7277479 134 O00257 CBX4 E3 SUMO-protein ligase CBX4 yes yes 0 0 1 By MS/MS 2 0 1 1 10.18 7.9363 3 0.00062874 10366 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 69.258 55.349 14080000 0 0 14080000 0 0 0 0 0 0 0 0 0 0 0 0 46452 134 41654 389617 307240 307240 1 SGEVLVNVK Unmodified 943.53385 0.53384611 2273 Q13347 EIF3I Eukaryotic translation initiation factor 3 subunit I yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 41.551 40.518 2 0.0033037 45216 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 93.374 63.189 926750000 30781000 521940000 0 14636000 17248000 22325000 23339000 17017000 16528000 27993000 39388000 49481000 33064000 41889000 71122000 46453 2273 41655 389618;389619;389620;389621;389622;389623;389624;389625;389626;389627;389628;389629;389630;389631;389632 307241;307242;307243;307244;307245;307246;307247;307248;307249;307250;307251;307252;307253;307254;307255 307242 12 SGEVTLTK Unmodified 833.44945 0.44944778 3912 Q96KQ7 EHMT2 Histone-lysine N-methyltransferase EHMT2 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 18.872 19.124 2 0.037548 19589 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 51.346 12.554 41728000 0 0 0 0 3490700 0 4292700 3023400 4369400 4141100 3470300 3928900 5120900 4529100 5361100 46454 3912 41656 389633;389634;389635;389636;389637;389638;389639;389640;389641;389642 307256;307257 307256 2 SGFDDPGIFYSDSFGGDAQADEGQARK Acetyl (Protein N-term) 2878.2318 0.23181003 1333 P33992 MCM5 DNA replication licensing factor MCM5 yes yes 1 0 1 By MS/MS By MS/MS 2.5 0.5 3 3 2 4 88.925 84.28 2;3 1.8921E-78 106047 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 131.57 129.37 395610000 34100000 361510000 0 0 0 0 0 0 0 0 0 0 0 0 0 46455 1333 41657 389643;389644;389645;389646;389647;389648 307258;307259;307260;307261 307261 4 SGFEDMFAK Unmodified 1030.443 0.44298219 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71.543 71.05 2 0.014773 81808 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 57.96 47.132 117030000 0 56479000 953630 2492600 3294400 4598700 4052800 4105400 2808200 4593400 6829900 5378000 5502600 5369700 10567000 46456 1601 41658 389649;389650;389651;389652;389653;389654;389655;389656;389657;389658;389659;389660;389661;389662 307262;307263;307264;307265;307266;307267 307262 6 SGFEGMFTK Unmodified 1002.4481 0.44806757 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64.606 63.495 2 0.0095883 72631 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 66.299 55.992 352870000 17180000 110620000 11822000 9616900 8077600 19405000 11905000 18502000 9452700 21600000 23926000 21099000 15616000 15376000 38670000 46457 1601 41659 389663;389664;389665;389666;389667;389668;389669;389670;389671;389672;389673;389674;389675;389676;389677 307268;307269;307270;307271;307272;307273;307274;307275;307276;307277;307278 307276 10 SGFEGMFTK Oxidation (M) 1018.443 0.44298219 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes no 0 1 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42.243 41.736 2 0.0087571 46886 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 60.019 32.882 180770000 0 39425000 12331000 9462600 6503200 12226000 6621800 7042600 8696700 11149000 13807000 21612000 13300000 9271600 9322800 46458 1601 41659 389678;389679;389680;389681;389682;389683;389684;389685;389686;389687;389688;389689;389690;389691 307279;307280;307281 307279 2583 3 SGFEPASLK Unmodified 934.476 0.47599688 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 45.295 43.978 2 0.0042902 49722 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 87.308 64.378 9829000000 88236000 2092900000 60688000 0 698000000 444810000 503950000 386590000 357570000 678720000 982140000 1358000000 898930000 612170000 666340000 46459 1356 41660 389692;389693;389694;389695;389696;389697;389698;389699;389700;389701;389702;389703;389704;389705;389706 307282;307283;307284;307285;307286;307287;307288;307289;307290;307291;307292;307293;307294;307295;307296;307297;307298 307291 12 SGFEPPGDIEFEDYTQPMK Oxidation (M) 2201.9463 0.94631603 3979 Q96RU3 FNBP1 Formin-binding protein 1 yes yes 0 1 0 By MS/MS 2 0 1 1 85.028 80.284 2 1.9996E-13 99764 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.9 95.372 42524000 0 42524000 0 0 0 0 0 0 0 0 0 0 0 0 0 46460 3979 41661 389707 307299;307300 307300 5464 2 SGFEPPGDIEFEDYTQPMK Unmodified 2185.9514 0.95140141 3979 Q96RU3 FNBP1 Formin-binding protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 87.511 83.482 2 7.854E-41 103641 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 132.24 127.44 101080000 0 101080000 0 0 0 0 0 0 0 0 0 0 0 0 0 46461 3979 41661 389708;389709 307301 307301 1 SGFGEISSPVIR Unmodified 1247.651 0.65100113 1797 P57740 NUP107 Nuclear pore complex protein Nup107 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.42 71.437 2 2.5304E-05 81968 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 93.556 79.399 168890000 0 0 0 14877000 10368000 21205000 10516000 13907000 10745000 25533000 0 22906000 20089000 18745000 0 46462 1797 41662 389710;389711;389712;389713;389714;389715;389716;389717;389718;389719;389720;389721 307302;307303;307304;307305;307306;307307;307308;307309;307310;307311 307310 10 SGFLEELLGEK Acetyl (Protein N-term) 1262.6394 0.63943339 2872 Q6DKJ4 NXN Nucleoredoxin yes yes 1 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 101.91 97.233 2 3.469E-10 121181 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 172.98 121.92 116360000 32986000 81297000 2072700 0 0 0 0 0 0 0 0 0 0 0 0 46463 2872 41663 389722;389723;389724;389725 307312;307313;307314;307315 307314 4 SGFLGTNPAPR Unmodified 1115.5724 0.57235688 901 P0CG12 CHTF8 Chromosome transmission fidelity protein 8 homolog isoform 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 48.155 48.388 2 0.00027892 54392 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 92.838 75.598 365020000 0 0 0 31248000 0 33524000 0 45895000 31610000 40898000 63373000 64740000 0 0 53733000 46464 901 41664 389726;389727;389728;389729;389730;389731;389732;389733;389734 307316;307317;307318;307319;307320;307321;307322 307320 7 SGFLVWR Unmodified 863.46537 0.46537261 4002 Q96T88 UHRF1 E3 ubiquitin-protein ligase UHRF1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 77.607 77.652 2 0.050333 89071 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.714 44.948 43783000 0 0 0 3425700 1752800 5791800 3526800 3071600 3001800 3107200 0 4588900 3674800 3315100 8526800 46465 4002 41665 389735;389736;389737;389738;389739;389740;389741;389742;389743;389744;389745 307323;307324 307323 2 SGFNDNSVK Unmodified 966.44067 0.44067401 3295 Q8IZH2 XRN1 5'-3' exoribonuclease 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 16.953 16.843 2 0.013293 17153 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 60.019 48.798 108030000 0 40390000 0 2457500 3677000 3803900 6871000 3768900 4038500 4732700 10011000 7076700 6772100 6854300 7580000 46466 3295 41666 389746;389747;389748;389749;389750;389751;389752;389753;389754;389755;389756;389757;389758 307325;307326;307327;307328;307329 307329 5 SGFNFGGTGAPTGGFTFGTAK Acetyl (Protein N-term) 2019.9327 0.9326553 1387 P37198 NUP62 Nuclear pore glycoprotein p62 yes yes 1 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 91.858 91.466 2 1.2824E-28 106668 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 135.72 127.2 84137000 0 20736000 0 1318100 4914700 2239500 3422700 10418000 0 8727700 6019100 6709400 0 3644400 15988000 46467 1387 41667 389759;389760;389761;389762;389763;389764;389765;389766;389767;389768;389769 307330;307331;307332;307333;307334;307335;307336;307337;307338;307339 307335 10 SGFNLEELEK Unmodified 1164.5663 0.56626845 4195 Q9BVP2 GNL3 Guanine nucleotide-binding protein-like 3 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.7 3.52 2 1 7 2 1 1 1 1 1 1 1 1 75.45 74.433 2 0.00010047 93112 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.83 95.155 181970000 0 131430000 840240 0 5087800 0 5010100 4096600 0 0 8204000 10391000 9727700 7183100 0 46468 4195 41668 389770;389771;389772;389773;389774;389775;389776;389777;389778;389779 307340;307341;307342;307343;307344 307340 5 SGFNPNQGFFK Unmodified 1241.5829 0.58292157 2525 Q15386 UBE3C Ubiquitin-protein ligase E3C yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 2 1 1 69.791 68.849 2 0.0015128 78178 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.23 51.258 196020000 107560000 33119000 0 3203400 2901700 6953600 6411800 3298400 5475600 4254600 6279800 2228100 0 7267100 7074300 46469 2525 41669 389780;389781;389782;389783;389784;389785;389786;389787;389788;389789;389790;389791;389792;389793 307345;307346;307347;307348;307349;307350;307351;307352;307353 307349 9 SGFSAQQVATQATAK Unmodified 1493.7474 0.74742071 1219 P27540 ARNT Aryl hydrocarbon receptor nuclear translocator yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 48.931 49.157 2 4.3665E-27 54423 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 175.57 139.15 125640000 0 0 0 0 12408000 8814300 14705000 15219000 0 15241000 15791000 14476000 0 0 28985000 46470 1219 41670 389794;389795;389796;389797;389798;389799;389800;389801 307354;307355;307356;307357;307358;307359;307360;307361 307356 8 SGFSLDNGELR Unmodified 1193.5677 0.56766543 5046 Q9UNZ2 NSFL1C NSFL1 cofactor p47 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 61.723 61.811 2 0.00020793 69738 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 126.07 108.16 71397000 0 0 0 2978500 0 6672600 3119400 2745100 0 4641700 0 0 5949400 14308000 30982000 46471 5046 41671 389802;389803;389804;389805;389806;389807;389808;389809;389810 307362;307363;307364;307365;307366;307367 307363 5 SGFSPELIDYLEGK Acetyl (Protein N-term) 1595.7719 0.77190413 5245 Q9Y5Q9 GTF3C3 General transcription factor 3C polypeptide 3 yes yes 1 0 0 By MS/MS By matching By MS/MS By MS/MS By matching 6.71 3.81 2 1 4 3 1 1 1 1 98.534 96.802 2 0.00013389 114029 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 71.153 56.463 139740000 0 128750000 0 0 0 0 0 801740 0 4589200 2447500 0 0 0 3153600 46472 5245 41672 389811;389812;389813;389814;389815;389816;389817 307368;307369;307370;307371 307368 4 SGFSSISVSR Unmodified 1025.5142 0.5141733 66;779 P04259;CON__P04259 KRT6B Keratin, type II cytoskeletal 6B no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 2 1 1 1 1 1 1 1 1 1 46.121 46.51 2 0.0004399 52168 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 136.57 102.16 + 1237200000 0 0 0 0 0 0 141300000 0 39037000 0 86390000 109890000 751940000 67828000 40794000 46473 779;66 41673 389818;389819;389820;389821;389822;389823;389824;389825;389826;389827;389828 307372;307373;307374;307375;307376;307377;307378;307379;307380;307381;307382;307383;307384;307385 307380 14 SGFSSPSPSQTSSLGTAFTQHHRPVITGPR Unmodified 3123.5486 0.54860833 2199 Q12857 NFIA Nuclear factor 1 A-type yes yes 0 0 1 By MS/MS 10 0 1 1 69.211 69.677 5 8.0812E-06 79277 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 30.855 28.027 21346000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21346000 46474 2199 41674 389829 307386 307386 1 SGFSSVSVSR Unmodified 1011.4985 0.49852324 58 CON__P02538;P02538 KRT6A Keratin, type II cytoskeletal 6A yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 36.874 37.005 2 0.00071753 40786 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 120.99 55.742 + 1982100000 0 0 0 319630000 79184000 47222000 167020000 235760000 33164000 150540000 63866000 84865000 740770000 60072000 0 46475 58 41675 389830;389831;389832;389833;389834;389835;389836;389837;389838;389839;389840 307387;307388;307389;307390;307391;307392;307393;307394;307395;307396;307397;307398 307391 11 SGFSTEER Acetyl (Protein N-term) 953.40904 0.40903953 2505 Q15181 PPA1 Inorganic pyrophosphatase yes yes 1 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 30.72 30.961 2 0.022339 32560 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.599 27.159 71188000 0 0 0 0 2530700 5673200 0 0 2623100 0 0 14421000 0 11326000 34614000 46476 2505 41676 389841;389842;389843;389844;389845;389846 307399 307399 1 SGGAATVEEAPSEFEEEASR Unmodified 2051.892 0.89197228 3527 Q8TF64 GIPC3 PDZ domain-containing protein GIPC3 yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 65.614 65.753 2 3.1185E-19 75364 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 81.494 68.066 15421000 0 0 0 0 1120300 0 0 0 0 0 3673400 0 0 3087000 7540000 46477 3527 41677 389847;389848;389849;389850;389851 307400;307401 307401 2 SGGAATVEEAPSEFEEEASRK Unmodified 2179.9869 0.9869353 3527 Q8TF64 GIPC3 PDZ domain-containing protein GIPC3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 61.018 61.16 3 2.9101E-06 69119 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.747 56.308 27996000 0 0 0 0 1735100 7982000 0 0 0 0 0 6678300 0 0 11601000 46478 3527 41678 389852;389853;389854;389855 307402;307403;307404 307402 3 SGGASATGPRRGPPGLEDTTSK Acetyl (Protein N-term) 2140.0509 0.050872957 611 O94966 USP19 Ubiquitin carboxyl-terminal hydrolase 19 yes yes 1 0 2 By MS/MS 2 0 1 1 42.502 35.766 3 0.00021333 49276 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.529 31.935 7254300 7254300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46479 611 41679 389856 307405 307405 1 SGGASHSELIHNLRK Unmodified 1604.8383 0.83830141 1133 P22061 PCMT1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase yes yes 0 0 1 By MS/MS By matching By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 26.192 26.438 3 3.8493E-05 28600 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 71.98 60.925 41708000 0 0 0 0 0 5931200 0 2878400 3932900 2569600 0 0 7202500 0 19194000 46480 1133 41680 389857;389858;389859;389860;389861;389862 307406;307407;307408;307409 307406 4 SGGDETPSQSSDISHVLETETIFTPSSVK Unmodified 3034.4255 0.42548404 3616 Q92539 LPIN2 Phosphatidate phosphatase LPIN2 yes yes 0 0 0 By MS/MS 2 0 1 1 90.754 85.858 3 0.00033096 106762 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 33.289 27.447 18308000 0 18308000 0 0 0 0 0 0 0 0 0 0 0 0 0 46481 3616 41681 389863 307410 307410 1 SGGDVDHSTLVTLFK Unmodified 1574.794 0.79403655 1459 P42575 CASP2 Caspase-2;Caspase-2 subunit p18;Caspase-2 subunit p13;Caspase-2 subunit p12 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.497 76.555 3 0.00589 88425 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 29.341 18.682 64842000 0 0 0 2620600 1945300 6649100 3568300 4507000 4482800 6518000 5798100 6105400 3948100 4929000 13770000 46482 1459 41682 389864;389865;389866;389867;389868;389869;389870;389871;389872;389873;389874;389875 307411;307412;307413;307414;307415;307416 307414 6 SGGELDIVVTSNK Unmodified 1317.6776 0.67760981 3922 Q96M27 PRRC1 Protein PRRC1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 63.221 57.885 2 0.0098288 74327 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.685 54.482 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46483 3922 41683 389876;389877 307417;307418 307417 2 SGGGFGPDPGSGTTVPAR Unmodified 1615.759 0.75904803 4400 Q9H4L4 SENP3 Sentrin-specific protease 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.719 47.881 2 1.7773E-19 53931 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 98.337 88.905 205880000 0 0 0 10983000 9235500 10807000 11752000 11561000 10248000 21885000 17815000 23503000 27836000 23694000 26556000 46484 4400 41684 389878;389879;389880;389881;389882;389883;389884;389885;389886;389887;389888;389889 307419;307420;307421;307422;307423;307424;307425;307426;307427;307428;307429;307430 307419 12 SGGGFSSGSAGIINYQR Unmodified 1656.7856 0.78559713 780 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 26 3 2 2 3 3 2 2 2 1 3 2 1 61.075 61.117 2;3 1.8101E-38 69104 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 176.18 157.87 + 4579600000 0 0 0 973420000 186010000 125060000 265370000 1255400000 105180000 311040000 288500000 336570000 478650000 182700000 71594000 46485 780 41685 389890;389891;389892;389893;389894;389895;389896;389897;389898;389899;389900;389901;389902;389903;389904;389905;389906;389907;389908;389909;389910;389911;389912;389913;389914;389915 307431;307432;307433;307434;307435;307436;307437;307438;307439;307440;307441;307442;307443;307444;307445;307446;307447;307448;307449;307450;307451 307433 20 SGGGFSSGSAGIINYQRR Unmodified 1812.8867 0.88670816 780 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 52.814 52.911 3 3.8795E-43 60091 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 149 137.89 + 368010000 0 0 0 94601000 12716000 0 25301000 125520000 14127000 20709000 15304000 0 31030000 14643000 14061000 46486 780 41686 389916;389917;389918;389919;389920;389921;389922;389923;389924;389925 307452;307453;307454;307455;307456;307457;307458;307459;307460;307461;307462;307463;307464 307454 13 SGGGGDIHQGFQSLLTEVNK Unmodified 2043.0021 0.0021318501 1344 P35237 SERPINB6 Serpin B6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching By MS/MS 6.64 3.88 5 1 8 3 2 1 1 1 1 1 1 1 1 1 81.655 79.462 2;3 0 99691 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 338.89 304.14 2221900000 687890000 1354300000 68147000 0 0 3122700 0 3050700 3916400 5674400 10080000 8043000 0 5245600 72470000 46487 1344 41687 389926;389927;389928;389929;389930;389931;389932;389933;389934;389935;389936;389937;389938;389939 307465;307466;307467;307468;307469;307470;307471 307466 6 SGGGGGGGFGR Unmodified 864.38383 0.38382783 74 CON__P13647;P13647 KRT5 Keratin, type II cytoskeletal 5 no no 0 0 0 By MS/MS 10 0 1 1 7.6222 7.778 2 0.00020068 5875 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 110.41 92.422 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46488 74 41688 389940 307472 307472 1 SGGGGGGGGCGGGGGVSSLR Unmodified 1548.6699 0.66991545 72 CON__P13645;P13645 KRT10 Keratin, type I cytoskeletal 10 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 4 2 2 2 1 2 2 1 1 1 1 1 21.646 21.773 2;3 1.8358E-261 22191 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 235.11 211.08 + 1821100000 0 0 0 915080000 109030000 61759000 124180000 37873000 61105000 113640000 84916000 85116000 94076000 101060000 33241000 46489 72 41689 389941;389942;389943;389944;389945;389946;389947;389948;389949;389950;389951;389952;389953;389954;389955;389956;389957;389958;389959;389960 307473;307474;307475;307476;307477;307478;307479;307480;307481;307482;307483;307484;307485;307486;307487;307488 307483 15 SGGGGGGGGSSWGGR Unmodified 1191.5017 0.50171113 2243 Q13151 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 12.144 12.358 2 6.5149E-07 10542 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 108.56 99.35 17697000 0 0 0 0 0 1608400 1483000 901440 0 1509500 2417700 2911100 1494000 979950 4391800 46490 2243 41690 389961;389962;389963;389964;389965;389966;389967;389968;389969 307489;307490;307491 307489 3 SGGGGGGGLGSGGSIR Unmodified 1231.5905 0.59052614 1354 P35527;CON__P35527 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.3 2.1 2 18 1 1 1 1 1 1 5 1 1 2 1 2 1 1 23.223 22.957 2;3 1.0306E-191 21452 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 228.78 196.85 + 38782000000 589350 2771500 0 3693100000 2230100000 2815500000 2077700000 10459000000 1936200000 3158200000 3001500000 3288400000 3265500000 1586200000 1267300000 46491 1354 41691 389970;389971;389972;389973;389974;389975;389976;389977;389978;389979;389980;389981;389982;389983;389984;389985;389986;389987;389988;389989 307492;307493;307494;307495;307496;307497;307498;307499;307500;307501;307502;307503;307504;307505;307506;307507;307508;307509;307510;307511;307512;307513;307514;307515;307516;307517;307518;307519;307520;307521;307522;307523;307524;307525;307526;307527;307528;307529;307530;307531;307532;307533;307534;307535;307536;307537;307538;307539;307540 307520 47 SGGGGGGGLGSGGSIRSSYSR Unmodified 1811.8511 0.85105094 1354 P35527;CON__P35527 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 2 2 1 1 1 2 2 2 1 1 29.597 29.678 3 6.8758E-12 33916 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 72.644 52.976 + 66134000 0 0 0 16272000 8966900 8315600 0 9012600 1740900 4616900 8949800 4493400 0 3765300 0 46492 1354 41692 389990;389991;389992;389993;389994;389995;389996;389997;389998;389999;390000;390001;390002;390003;390004 307541;307542;307543;307544;307545;307546;307547;307548;307549;307550;307551 307550 11 SGGGGLMEEMNAMLAR 3 Oxidation (M) 1670.7062 0.70622588 1629 P50552 VASP Vasodilator-stimulated phosphoprotein yes yes 0 3 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 37.549 37.781 2 4.8705E-05 42281 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 76.143 69.61 29526000 0 0 0 2770800 0 0 0 3434800 0 5288500 5746200 6509600 5776200 0 0 46493 1629 41693 390005;390006;390007;390008;390009;390010 307552;307553;307554;307555;307556 307556 2613;2614;2615 5 SGGGIVEPIPLNIK Unmodified 1392.7977 0.79766537 3372 Q8N954 GPATCH11 G patch domain-containing protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 83.046 82.398 2 0.00039315 94532 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 72.434 59.478 183360000 0 123440000 2666100 1456700 2683300 2785200 3203600 3087700 3394800 3747000 5195100 6531200 4500400 5408800 15260000 46494 3372 41694 390011;390012;390013;390014;390015;390016;390017;390018;390019;390020;390021;390022;390023;390024;390025 307557;307558;307559;307560;307561;307562;307563;307564;307565;307566;307567;307568;307569;307570 307566 14 SGGGSSGLGLWEDTPK Unmodified 1546.7264 0.72635092 497 O75420 GIGYF1 PERQ amino acid-rich with GYF domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 70.769 70.991 2 0.00012566 81732 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 89.959 73.017 44606000 0 0 0 0 0 0 4724500 3840000 2984300 7018000 7713100 5232400 6080200 0 7014000 46495 497 41695 390026;390027;390028;390029;390030;390031;390032;390033 307571;307572;307573;307574;307575;307576;307577 307571 6 SGGGSVGAVVVK Unmodified 1015.5662 0.56620887 1021 P15408 FOSL2 Fos-related antigen 2 yes yes 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 31.866 32.001 2 0.0044008 35570 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 86.898 65.434 33567000 0 0 0 7559700 0 0 0 0 0 0 14235000 0 0 11772000 0 46496 1021 41696 390034;390035;390036 307578 307578 0 SGGGTETPVGCEAAPGGGSK Acetyl (Protein N-term) 1816.7898 0.78975581 3501 Q8TDH9 BLOC1S5 Biogenesis of lysosome-related organelles complex 1 subunit 5 yes yes 1 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.75 3.9 2 6 1 1 1 1 1 1 1 1 49.327 50.35 2 2.9306E-09 43606 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 72.496 57.294 33044000 3481100 515290 0 0 0 0 2095300 0 0 5006500 4639900 0 6283000 4415700 6607100 46497 3501 41697 390037;390038;390039;390040;390041;390042;390043;390044 307579;307580;307581;307582;307583;307584;307585 307579 7 SGGGTGEEPGSQGLNGEAGPEDSTR Unmodified 2345.0004 0.0003535287 275 O15355 PPM1G Protein phosphatase 1G yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 1 2 2 2 2 2 2 36.05 36.234 2;3 1.3149E-14 39528 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 65.213 62.023 144170000 0 0 0 11013000 6016300 11111000 7404300 7730500 2640800 5230400 18057000 19434000 19113000 12427000 23996000 46498 275 41698 390045;390046;390047;390048;390049;390050;390051;390052;390053;390054;390055;390056;390057;390058;390059;390060;390061;390062;390063;390064;390065;390066;390067 307586;307587;307588;307589;307590;307591;307592;307593;307594;307595;307596;307597;307598;307599;307600;307601;307602;307603 307595 18 SGGGTGEEPGSQGLNGEAGPEDSTRETPSQENGPTAK Unmodified 3584.5735 0.57349827 275 O15355 PPM1G Protein phosphatase 1G yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.55 3.8 3 2 6 1 4 1 1 1 1 1 1 42.196 39.971 3;4 4.83E-182 50166 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 156.44 154.8 216080000 8559400 144440000 0 0 0 4670600 0 0 0 5211600 11685000 10528000 11596000 0 19398000 46499 275 41699 390068;390069;390070;390071;390072;390073;390074;390075;390076;390077;390078 307604;307605;307606;307607;307608;307609;307610;307611;307612;307613;307614 307606 11 SGGGVIRGPAGNNDCR Acetyl (Protein N-term) 1627.7485 0.74850012 2145 Q07955 SRSF1 Serine/arginine-rich splicing factor 1 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.972 33.156 2 6.9217E-05 35131 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 92.925 77.659 158420000 0 0 0 8239500 7840400 7015400 9401500 11032000 6509200 9984600 24841000 18950000 11894000 11865000 30845000 46500 2145 41700 390079;390080;390081;390082;390083;390084;390085;390086;390087;390088;390089;390090 307615;307616;307617;307618;307619;307620;307621;307622;307623;307624;307625;307626;307627 307618 13 SGGGYGGDRGGGYGGDR Unmodified 1543.64 0.63999553 3664 Q92804 TAF15 TATA-binding protein-associated factor 2N yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 12.805 12.939 3 0.021131 11604 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 28.869 23.715 37653000 0 0 0 3004300 2849600 0 3008500 2957400 3267800 6217900 0 7171900 0 3245000 5930500 46501 3664 41701 390091;390092;390093;390094;390095;390096;390097;390098;390099 307628;307629;307630;307631 307629 4 SGGIETIANEYSDR Unmodified 1510.69 0.68996541 686 O95757 HSPA4L Heat shock 70 kDa protein 4L yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 61.364 61.677 2 3.9759E-05 69718 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 105.46 94.937 30321000 0 0 0 0 0 3233700 0 0 0 0 9382400 0 0 0 17704000 46502 686 41702 390100;390101;390102 307632;307633;307634 307633 3 SGGIPALVR Unmodified 868.51305 0.51305109 1010 P14923 JUP Junction plakoglobin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 54.844 55.051 2 0.0099506 63451 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 65.252 35.067 332510000 0 0 0 83759000 0 22529000 0 124160000 0 2084100 20845000 30213000 36426000 0 12493000 46503 1010 41703 390103;390104;390105;390106;390107;390108;390109;390110 307635;307636;307637;307638;307639 307637 4 SGGLGGSHALLLLR Unmodified 1349.7779 0.77793298 1464 P42704 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 73.964 74.128 3 0.0010001 84729 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.136 42.878 17840000 0 0 0 0 0 4396300 0 0 0 0 0 2663700 1537500 2579900 6662400 46504 1464 41704 390111;390112;390113;390114;390115 307640;307641 307641 2 SGGLQTPECLSR Unmodified 1303.619 0.61904908 2019 P85037 FOXK1 Forkhead box protein K1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 1 1 2 44.439 44.655 2 2.9927E-11 49234 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 150.1 126.67 288800000 0 0 0 13881000 13586000 17296000 17916000 15818000 22416000 24726000 19506000 42977000 30262000 27507000 42911000 46505 2019 41705 390116;390117;390118;390119;390120;390121;390122;390123;390124;390125;390126;390127;390128 307642;307643;307644;307645;307646;307647;307648;307649;307650;307651;307652;307653;307654;307655 307650 13 SGGLSVEVCGPALSQQWK Unmodified 1901.9305 0.93054681 2177 Q10471 GALNT2 Polypeptide N-acetylgalactosaminyltransferase 2;Polypeptide N-acetylgalactosaminyltransferase 2 soluble form yes yes 0 0 0 By MS/MS 2 0 1 1 83.683 78.962 2 7.79E-06 98230 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.307 78.352 17818000 0 17818000 0 0 0 0 0 0 0 0 0 0 0 0 0 46506 2177 41706 390129 307656 307656 1 SGGMERPFVLAR Oxidation (M) 1334.6765 0.67650438 2441 Q14697 GANAB Neutral alpha-glucosidase AB yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 45.334 45.591 3 0.001075 51389 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 61.235 48.227 393490000 0 0 0 0 19552000 21237000 0 22977000 0 38830000 60162000 64953000 0 60050000 105730000 46507 2441 41707 390130;390131;390132;390133;390134;390135;390136;390137 307657;307658;307659;307660;307661;307662;307663;307664;307665 307658 4006 5 SGGMERPFVLAR Unmodified 1318.6816 0.68158975 2441 Q14697 GANAB Neutral alpha-glucosidase AB yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.029 56.154 3 0.00029285 63087 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 66.498 56.81 198130000 0 0 0 7530700 6858900 9079900 8737400 15445000 6910600 12246000 21941000 14710000 15730000 27724000 51220000 46508 2441 41707 390138;390139;390140;390141;390142;390143;390144;390145;390146;390147;390148;390149 307666;307667;307668;307669;307670;307671 307670 6 SGGMSNELNNIISR Oxidation (M) 1506.7097 0.709655 1714 P53396 ACLY ATP-citrate synthase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 1 2 3 2 4 3 1 2 2 1 2 1 61.803 61.914 2 2.2507E-22 66799 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 145.91 135.96 4617500000 0 0 0 4139100 291980000 211230000 1139200000 910380000 1005400000 219210000 279080000 481880000 12630000 24079000 38280000 46509 1714 41708 390150;390151;390152;390153;390154;390155;390156;390157;390158;390159;390160;390161;390162;390163;390164;390165;390166;390167;390168;390169;390170;390171;390172;390173 307672;307673;307674;307675;307676;307677;307678;307679;307680;307681;307682;307683;307684;307685;307686;307687;307688;307689;307690;307691;307692;307693;307694;307695;307696;307697;307698;307699 307681 2785 28 SGGMSNELNNIISR Unmodified 1490.7147 0.71474038 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 2 1 2 2 2 1 1 1 1 1 1 73.125 73.16 2;3 5.9616E-27 83828 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 193.28 177.62 3470100000 0 0 0 77815000 147420000 238830000 389910000 879810000 875870000 258550000 237180000 338820000 9915000 15975000 0 46510 1714 41708 390174;390175;390176;390177;390178;390179;390180;390181;390182;390183;390184;390185;390186;390187;390188;390189 307700;307701;307702;307703;307704;307705;307706;307707;307708;307709;307710;307711;307712;307713 307704 14 SGGNLEVMGLMLGK 2 Oxidation (M) 1436.7003 0.70033587 3684 Q92905 COPS5 COP9 signalosome complex subunit 5 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 69.967 69.973 2 0.00086976 80475 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 50.13 30.815 22871000 0 0 0 0 2247800 5240500 0 0 0 5387300 4994300 0 5000800 0 0 46511 3684 41709 390190;390191;390192;390193;390194 307714;307715;307716;307717 307714 5237;5238 2 SGGNLEVMGLMLGK Unmodified 1404.7105 0.71050662 3684 Q92905 COPS5 COP9 signalosome complex subunit 5 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 87 87.131 2 0.00052599 100720 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.658 70.521 6530900 0 0 0 0 0 0 0 0 0 0 0 0 0 831210 5699700 46512 3684 41709 390195;390196 307718;307719 307718 2 SGGNSYGSGGASYNPGSHGGYGGGSGGGSSYQGK Unmodified 3011.2302 0.2302469 2207 Q12906 ILF3 Interleukin enhancer-binding factor 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 34.938 34.883 3 2.1233E-25 37527 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 51.566 50.838 18311000 0 0 0 2916300 1984800 0 0 2671300 3180900 0 0 0 0 7557500 0 46513 2207 41710 390197;390198;390199;390200;390201 307720;307721;307722 307721 3 SGGQVRDEYRQDYDAGR Unmodified 1970.8831 0.88307935 1684 P52298 NCBP2 Nuclear cap-binding protein subunit 2 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 23.345 23.726 3 0.024005 23818 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 41.871 24.365 28867000 0 0 0 0 0 0 1172900 0 0 1761500 5646100 4257300 4703400 3469900 7856400 46514 1684 41711 390202;390203;390204;390205;390206;390207;390208 307723 307723 0 SGGRSDLIPTIK Unmodified 1242.6932 0.6932003 2436 Q14691 GINS1 DNA replication complex GINS protein PSF1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 62.025 55.23 2;3 0.0076223 75006 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.108 43.95 133900000 126920000 0 6986900 0 0 0 0 0 0 0 0 0 0 0 0 46515 2436 41712 390209;390210;390211 307724;307725;307726 307725 2 SGGSAGEITFLEALAR Unmodified 1577.8049 0.80493559 4301 Q9GZR1 SENP6 Sentrin-specific protease 6 yes yes 0 0 0 By MS/MS 10 0 1 1 92.016 92.154 2 0.047125 106731 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 27.681 17.728 962720 0 0 0 0 0 0 0 0 0 0 0 0 0 0 962720 46516 4301 41713 390212 307727 307727 1 SGGSAGEITFLEALARSESK Unmodified 2009.0065 0.006548526 4301 Q9GZR1 SENP6 Sentrin-specific protease 6 yes yes 0 0 1 By MS/MS 2 0 1 1 95.121 86.991 3 0.023772 112524 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 26.742 9.862 3802500 3802500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46517 4301 41714 390213 307728 307728 1 SGGSAGGLAEGAGALAPPPPPPQIK Unmodified 2196.1539 0.15388147 1628 P50548 ERF ETS domain-containing transcription factor ERF yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 77.016 76.707 3 2.0097E-23 88359 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 83.251 78.492 777070000 0 60155000 0 28923000 46567000 47589000 66416000 51719000 53399000 68282000 70715000 81703000 57328000 57815000 86459000 46518 1628 41715 390214;390215;390216;390217;390218;390219;390220;390221;390222;390223;390224;390225;390226 307729;307730;307731;307732;307733;307734;307735;307736;307737;307738;307739;307740;307741;307742;307743;307744 307731 16 SGGSDRTIAYENK Unmodified 1396.6583 0.65827136 2157 Q08380 LGALS3BP Galectin-3-binding protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 20.119 16.486 3 0.027439 21806 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 50.102 36.513 44490000 4657400 29168000 10666000 0 0 0 0 0 0 0 0 0 0 0 0 46519 2157 41716 390227;390228;390229 307745 307745 0 SGGSGHAVAEPASPEQELDQNK Unmodified 2207.0091 0.0090677215 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By MS/MS 8.83 2.61 1 5 1 1 1 1 1 1 41.8 41.065 3 7.4452E-08 44975 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 58.093 49.734 71403000 0 6374000 0 10154000 0 0 4058800 0 12065000 0 21009000 0 0 17743000 0 46520 1492 41717 390230;390231;390232;390233;390234;390235 307746;307747;307748 307748 3 SGGSSCSQTPSR Acetyl (Protein N-term) 1251.515 0.51497794 2311 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 yes yes 1 0 0 By MS/MS 10 0 1 1 8.1207 8.4796 2 0.00019912 6579 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 76.943 65.722 3686200 0 0 0 0 0 0 0 0 0 0 3686200 0 0 0 0 46521 2311 41718 390236 307749 307749 1 SGGTALHVAAAK Unmodified 1081.588 0.58800695 232 O14974 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 20.772 19.584 2 2.3204E-192 27205 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 260.04 208.69 484590000 259170000 91073000 32469000 7300200 8452100 7391900 7454500 6660200 5355500 13531000 11565000 14173000 11976000 8014800 0 46522 232 41719 390237;390238;390239;390240;390241;390242;390243;390244;390245;390246;390247;390248;390249;390250;390251;390252;390253 307750;307751;307752;307753;307754;307755;307756;307757;307758;307759;307760;307761;307762;307763;307764;307765 307754 12 SGGTEGLLAEK Unmodified 1060.5401 0.5400537 4895 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 36.154 36.35 2 1.8332E-05 40124 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 132.78 97.422 660400000 0 0 0 40517000 41052000 0 61497000 49325000 39530000 56091000 72770000 75203000 75256000 58635000 90526000 46523 4895 41720 390254;390255;390256;390257;390258;390259;390260;390261;390262;390263;390264 307766;307767;307768;307769;307770;307771 307767 6 SGGTPYIGSK Acetyl (Protein N-term) 1007.4924 0.49237523 3415 Q8ND56 LSM14A Protein LSM14 homolog A yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.88 2.98 1 7 1 1 1 1 1 1 1 1 47.481 48.325 2 0.0026611 44314 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 60.518 25.711 83334000 2860500 0 0 0 0 8662900 10421000 0 7525900 15698000 18121000 0 10253000 9791700 0 46524 3415 41721 390265;390266;390267;390268;390269;390270;390271;390272 307772;307773;307774;307775;307776;307777;307778;307779 307773 8 SGGVGGSNTNWK Unmodified 1162.5367 0.53669966 1221 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 22.51 22.283 2 2.7539E-05 22847 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 96.171 82.053 123180000 0 10233000 0 3892000 5209100 14043000 6945000 5997900 6825800 0 16836000 0 13893000 14163000 25142000 46525 1221 41722 390273;390274;390275;390276;390277;390278;390279;390280;390281;390282;390283;390284 307780;307781;307782;307783;307784;307785;307786;307787;307788;307789;307790;307791 307788 12 SGGVNQYVVQEVLSIK Unmodified 1718.9203 0.9202997 2476 Q15021 NCAPD2 Condensin complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6 4 4 4 1 2 1 1 1 1 1 91.942 89.475 2;3 0.0003043 103614 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.519 57.676 312220000 20204000 277680000 4532000 0 0 0 0 0 0 3049100 1896900 0 0 1213400 3639200 46526 2476 41723 390285;390286;390287;390288;390289;390290;390291;390292 307792;307793;307794;307795;307796;307797 307794 5 SGGVYGGDEVGALVFDIGSYTVRAGYAGEDCPK Acetyl (Protein N-term) 3407.5616 0.56160036 716 O96019 ACTL6A Actin-like protein 6A yes yes 1 0 1 By MS/MS 2 0 1 1 100.78 92.651 3 6.041E-80 119316 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 116.94 114.83 20614000 20614000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46527 716 41724 390293 307798 307798 1 SGHCTACLTGK Unmodified 1190.5172 0.51722654 2124 Q06203 PPAT Amidophosphoribosyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 2 3 2 13.048 9.8141 2;3 3.8739E-36 15219 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 213.8 185.97 571600000 312370000 180810000 78421000 0 0 0 0 0 0 0 0 0 0 0 0 46528 2124 41725 390294;390295;390296;390297;390298;390299;390300 307799;307800;307801;307802;307803 307801 3 SGHFEQAIK Unmodified 1015.5087 0.50869399 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 19.141 19.323 2 0.021188 20022 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 52.482 24.273 20385000 0 0 0 0 0 4381600 0 1836800 0 6104800 0 0 3667500 4394100 0 46529 2047 41726 390301;390302;390303;390304;390305 307804;307805;307806;307807;307808 307804 5 SGHILSYDNIK Unmodified 1245.6354 0.63535107 488 O75376 NCOR1 Nuclear receptor corepressor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.33 2.98 5 1 2 2 1 1 53.51 47.167 2;3 1.7147E-11 64553 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 180.67 150.51 166410000 114890000 47653000 3869100 0 0 0 0 0 0 0 0 0 0 0 0 46530 488 41727 390306;390307;390308;390309;390310;390311 307809;307810;307811;307812;307813;307814;307815;307816 307814 7 SGHIQTLLR Unmodified 1023.5825 0.58252764 5147 Q9Y3A6 TMED5 Transmembrane emp24 domain-containing protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 36.074 36.312 2 0.018109 39832 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 55.112 32.981 39763000 0 0 0 0 2016100 3112300 3303300 3169300 1893100 3884200 4526400 5674400 3284100 3448800 5450700 46531 5147 41728 390312;390313;390314;390315;390316;390317;390318;390319;390320;390321;390322 307817;307818 307817 2 SGHTLPPLPVPGTNSTEQASVPR Acetyl (Protein N-term) 2383.2132 0.21318726 1802 P58107 EPPK1 Epiplakin yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 81.189 81.256 3 3.0647E-17 94191 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 63.869 52.409 41765000 0 0 0 0 7666400 6042000 5084400 6206200 0 10277000 6489600 0 0 0 0 46532 1802 41729 390323;390324;390325;390326;390327;390328 307819;307820;307821;307822;307823;307824;307825;307826 307824 8 SGIDITDFQAK Unmodified 1193.5928 0.59281755 1600 P49790 NUP153 Nuclear pore complex protein Nup153 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.982 69.061 2 0.0031443 79660 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 108.57 81.877 341530000 0 0 0 17980000 17091000 25059000 25083000 27362000 20759000 29257000 37294000 34594000 32054000 28584000 46409000 46533 1600 41730 390329;390330;390331;390332;390333;390334;390335;390336;390337;390338;390339;390340 307827;307828;307829;307830;307831;307832;307833;307834;307835;307836 307833 1 SGIFLWTK Unmodified 950.52255 0.52255314 2830 Q5VZ89 DENND4C DENN domain-containing protein 4C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 80.954 80.954 2 0.025413 92772 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 58.716 45.668 36282000 0 0 0 2889600 2971900 4674300 0 0 0 0 3823600 8863300 0 3725700 9333200 46534 2830 41731 390341;390342;390343;390344;390345;390346;390347 307837;307838;307839 307839 3 SGIGHEASLK Unmodified 997.51926 0.51925868 3372 Q8N954 GPATCH11 G patch domain-containing protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 21.775 17.944 2 5.7514E-06 25893 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 144.65 61.385 61835000 18938000 23476000 19421000 0 0 0 0 0 0 0 0 0 0 0 0 46535 3372 41732 390348;390349;390350 307840;307841;307842;307843 307842 4 SGIHRTVHAGEVGSAEVVK Unmodified 1932.0177 0.017722335 736 P00813 ADA Adenosine deaminase yes yes 0 0 1 By MS/MS 2 0 1 1 40.288 33.665 4 0.0043713 46560 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 27.947 17.16 23069000 23069000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46536 736 41733 390351 307844 307844 1 SGIILQAESRK Unmodified 1200.6826 0.68263561 3429 Q8NEU8 APPL2 DCC-interacting protein 13-beta yes yes 0 0 1 By MS/MS 2 0 1 1 44.377 37.512 3 0.006236 51691 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.023 28.322 40442000 40442000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46537 3429 41734 390352 307845 307845 0 SGIIPTSPTPYTYNK Unmodified 1637.8301 0.83008771 3234 Q8IW41 MAPKAPK5 MAP kinase-activated protein kinase 5 yes yes 0 0 0 By MS/MS 2 0 1 1 75.1 70.16 2 0.0033277 87893 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.085 45.042 34410000 0 34410000 0 0 0 0 0 0 0 0 0 0 0 0 0 46538 3234 41735 390353 307846 307846 1 SGIISEPLNK Unmodified 1056.5815 0.58152458 3063 Q7LFL8 CXXC5 CXXC-type zinc finger protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.796 47.959 2 0.015701 53714 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 49.96 25.94 141830000 0 0 0 9181400 9271300 9685500 12203000 7729100 10499000 15212000 14400000 15380000 11832000 10547000 15892000 46539 3063 41736 390354;390355;390356;390357;390358;390359;390360;390361;390362;390363;390364;390365 307847;307848;307849 307847 3 SGILPILVK Unmodified 938.61645 0.61645353 163 O00505 KPNA3 Importin subunit alpha-4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 84.247 83.291 2 0.0099506 96423 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 65.252 34.534 833380000 232380000 127670000 0 11666000 10584000 31501000 17306000 19959000 0 40853000 61493000 90593000 45713000 54091000 89565000 46540 163 41737 390366;390367;390368;390369;390370;390371;390372;390373;390374;390375;390376;390377;390378 307850;307851;307852;307853;307854;307855;307856;307857;307858;307859;307860;307861 307861 12 SGILTLDK Unmodified 845.48583 0.48583328 17 A3KN83 SBNO1 Protein strawberry notch homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 51.783 52.009 2 0.02509 58661 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 58.981 6.2646 104570000 0 0 0 0 6738300 13745000 8791200 0 5043500 12843000 12467000 9153000 10635000 10763000 14389000 46541 17 41738 390379;390380;390381;390382;390383;390384;390385;390386;390387;390388 307862;307863 307863 2 SGINPFDSQEAK Unmodified 1291.6044 0.60444487 1838 P61201 COPS2 COP9 signalosome complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.91 3.42 2 1 8 1 2 1 1 1 1 1 1 1 1 52.998 51.519 2 9.9209E-13 65409 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.76 82.167 1470600000 25555000 1021000000 0 0 0 38276000 40386000 0 0 47979000 66848000 51380000 51032000 48718000 79456000 46542 1838 41739 390389;390390;390391;390392;390393;390394;390395;390396;390397;390398;390399 307864;307865;307866;307867;307868;307869 307864 5 SGIPIVTSPYQIHFTK Unmodified 1786.9618 0.96177059 741 P01024 C3 Complement C3;Complement C3 beta chain;C3-beta-c;Complement C3 alpha chain;C3a anaphylatoxin;Acylation stimulating protein;Complement C3b alpha' chain;Complement C3c alpha' chain fragment 1;Complement C3dg fragment;Complement C3g fragment;Complement C3d fragment;Complement C3f fragment;Complement C3c alpha' chain fragment 2 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 82.101 82.27 3 0.011132 94923 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 32.746 21.054 6498400 0 0 0 0 0 0 0 2764600 0 0 0 3733800 0 0 0 46543 741 41740 390400;390401 307870 307870 1 SGIQPLCPER Unmodified 1155.5706 0.57064232 1446 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.759 42.934 2 0.0015804 46714 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 103.56 59.755 1298900000 0 0 0 82413000 77386000 82922000 92104000 96523000 83307000 77675000 151230000 139770000 120570000 126930000 168050000 46544 1446 41741 390402;390403;390404;390405;390406;390407;390408;390409;390410;390411;390412;390413 307871;307872;307873;307874;307875;307876;307877;307878;307879;307880;307881;307882;307883;307884;307885 307875 15 SGIQPLCPERSHISDQSPLSSK Unmodified 2422.1911 0.19107161 1446 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 0 0 1 By MS/MS By MS/MS 2 0 4 2 2 65.544 59.517 3;4 1.7029E-08 80074 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.975 78.975 751620000 737280000 0 14344000 0 0 0 0 0 0 0 0 0 0 0 0 46545 1446 41742 390414;390415;390416;390417 307886;307887;307888 307887 2 SGISLGSPFHLTPDQEEK Unmodified 1940.948 0.94797101 1181 P25054 APC Adenomatous polyposis coli protein yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 82.708 77.379 3 2.3704E-05 99512 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.035 73.219 14936000 11611000 0 3325400 0 0 0 0 0 0 0 0 0 0 0 0 46546 1181 41743 390418;390419 307889;307890 307889 2 SGISPNLNVVDGR Unmodified 1326.6892 0.68917755 2977 Q6UVJ0 SASS6 Spindle assembly abnormal protein 6 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.134 63.222 2 2.0844E-08 72609 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 113.63 89.861 162630000 0 0 0 9855300 10030000 10387000 12175000 12247000 11353000 19303000 19747000 16639000 0 14202000 26691000 46547 2977 41744 390420;390421;390422;390423;390424;390425;390426;390427;390428;390429;390430;390431 307891;307892;307893;307894;307895;307896;307897;307898;307899;307900;307901;307902;307903;307904 307900 14 SGIVQYLQK Unmodified 1034.576 0.57604528 4757 Q9NZ08 ERAP1 Endoplasmic reticulum aminopeptidase 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 65.695 59.668 2 0.030437 79839 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.429 10.925 40412000 36929000 0 3482700 0 0 0 0 0 0 0 0 0 0 0 0 46548 4757 41745 390432;390433 307905 307905 1 SGIYFEPDCSSK Unmodified 1388.5918 0.59183127 444 O60911 CTSV Cathepsin L2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 54.218 54.079 2 0.040875 61314 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 34.692 29.727 66695000 0 0 0 57999000 0 0 5044000 3652700 0 0 0 0 0 0 0 46549 444 41746 390434;390435;390436 307906 307906 1 SGIYQVGYDDK Unmodified 1243.5721 0.57208211 3236 Q8IW75 SERPINA12 Serpin A12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 45.167 45.258 2 0.0020604 50586 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 81.338 55.779 80019000 0 0 0 17523000 3412200 5032600 6953600 19557000 0 5331400 6912600 10764000 0 4533100 0 46550 3236 41747 390437;390438;390439;390440;390441;390442;390443;390444;390445 307907;307908;307909;307910;307911;307912;307913 307909 7 SGKPAELLK Unmodified 941.55458 0.55458155 1249 P29401 TKT Transketolase yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 21.856 22.109 2 0.03943 21746 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.79 38.873 411160000 0 0 0 0 3069200 0 4202500 4145900 1390400 4461800 63760000 102450000 0 31503000 196170000 46551 1249 41748 390446;390447;390448;390449;390450;390451;390452;390453;390454 307914 307914 0 SGKPILEGAALDEALK Unmodified 1610.8879 0.88793694 2855 Q68CZ6 HAUS3 HAUS augmin-like complex subunit 3 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 77.863 74.248 3 0.00032797 93086 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.506 63.465 58445000 0 43278000 15167000 0 0 0 0 0 0 0 0 0 0 0 0 46552 2855 41749 390455;390456;390457 307915;307916;307917 307915 3 SGKYDLDFK Unmodified 1071.5237 0.52367535 827 P06733 ENO1 Alpha-enolase yes yes 0 0 1 By matching By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 42.218 42.594 2 0.013963 46722 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 145.25 105.18 182970000 0 0 0 0 0 0 0 0 1557300 5319900 3449800 0 0 0 172650000 46553 827 41750 390458;390459;390460;390461 307918 307918 1 SGLDLNTSLSPSLLQPGK Unmodified 1825.9785 0.97854286 4050 Q99708 RBBP8 DNA endonuclease RBBP8 yes yes 0 0 0 By MS/MS 2 0 1 1 90.063 85.167 2 0.0043543 105914 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 46.481 32.323 15447000 0 15447000 0 0 0 0 0 0 0 0 0 0 0 0 0 46554 4050 41751 390462 307919 307919 1 SGLDSVSSWLPLAK Unmodified 1458.7718 0.77184455 2946 Q6PD74 AAGAB Alpha- and gamma-adaptin-binding protein p34 yes yes 0 0 0 By MS/MS 10 0 1 1 91.233 91.371 2 0.024861 105861 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.836 44.066 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46555 2946 41752 390463 307920 307920 1 SGLELEPEEPPGWR Unmodified 1594.7627 0.76273643 3679 Q92888 ARHGEF1 Rho guanine nucleotide exchange factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 77.571 77.604 2 2.3417E-14 89641 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 117.02 93.796 74196000 0 0 0 5718000 5378700 9918600 6497300 6524300 4432600 0 8717000 11755000 5682000 9571800 0 46556 3679 41753 390464;390465;390466;390467;390468;390469;390470;390471;390472;390473 307921;307922;307923;307924;307925;307926;307927;307928;307929;307930 307921 10 SGLELLK Unmodified 758.4538 0.45380487 2647 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.739 55.868 2 0.03326 63108 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 72.138 7.3351 171610000 0 0 0 9742500 7199500 15398000 9463500 10963000 7722400 19046000 16415000 21800000 14667000 12899000 26296000 46557 2647 41754 390474;390475;390476;390477;390478;390479;390480;390481;390482;390483;390484;390485 307931;307932;307933;307934 307931 4 SGLEPASSPSK Unmodified 1058.5244 0.52440364 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.292 18.481 2 0.00025275 18284 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 105.52 70.167 133110000 0 0 0 9462600 9817000 8686700 10560000 9020200 8930700 13259000 11130000 13406000 13999000 9514900 15324000 46558 5262 41755 390486;390487;390488;390489;390490;390491;390492;390493;390494;390495;390496;390497 307935;307936;307937;307938;307939;307940;307941;307942;307943;307944;307945;307946 307944 12 SGLGDDLVQALGLSK Unmodified 1471.7882 0.7882229 5260 Q9Y613 FHOD1 FH1/FH2 domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 94.541 92.148 2 0.00024041 113899 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.688 77.214 65749000 0 63897000 334890 0 0 0 0 0 0 0 0 0 0 0 1517000 46559 5260 41756 390498;390499;390500 307947;307948 307947 2 SGLGDSSSDPANPDSHK Acetyl (Protein N-term) 1711.7285 0.72853576 2578 Q15788 NCOA1 Nuclear receptor coactivator 1 yes yes 1 0 0 By matching By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 2 30.841 31.289 2 0.00014756 33997 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 58.674 35.795 18204000 0 0 0 0 0 0 0 3120600 0 0 0 5326100 4082500 2471100 3203500 46560 2578 41757 390501;390502;390503;390504;390505;390506 307949;307950 307950 2 SGLGELILPENEPGSSIMPGK Unmodified 2124.0773 0.077270628 854 P07954 FH Fumarate hydratase, mitochondrial yes yes 0 0 0 By MS/MS 10 0 1 1 87.568 87.718 2 7.7829E-38 101428 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.38 76.201 8042300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8042300 46561 854 41758 390507 307951 307951 1 SGLGELILPENEPGSSIMPGK Oxidation (M) 2140.0722 0.07218525 854 P07954 FH Fumarate hydratase, mitochondrial yes yes 0 1 0 By matching By matching By matching By matching By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 83.768 83.772 2 1.833E-15 96196 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 88.087 67.246 45446000 0 0 0 667390 986640 1600100 0 0 0 0 6230400 6734300 0 5059400 24167000 46562 854 41758 390508;390509;390510;390511;390512;390513;390514 307952;307953 307952 1078 2 SGLGENLDPLASDSRK Acetyl (Protein N-term) 1699.8377 0.83769228 5292 Q9Y6Q9 NCOA3 Nuclear receptor coactivator 3 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 75.756 75.224 2 8.5134E-41 89336 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 154.28 127.87 177480000 0 51257000 0 6315500 5984800 9599200 12949000 8874700 8260400 10749000 12144000 15428000 10787000 8871300 16264000 46563 5292 41759 390515;390516;390517;390518;390519;390520;390521;390522;390523;390524;390525;390526;390527;390528 307954;307955;307956;307957;307958;307959;307960;307961;307962;307963;307964;307965 307958 11 SGLLVLTTPLASLAPR Unmodified 1607.961 0.9610423 2230 Q13057 COASY Bifunctional coenzyme A synthase;Phosphopantetheine adenylyltransferase;Dephospho-CoA kinase yes yes 0 0 0 By MS/MS 10 0 1 1 96.28 96.434 2 0.00099955 111869 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.452 41.033 3238700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3238700 46564 2230 41760 390529 307966 307966 1 SGLNQGAISTLQSSDILNLTK Unmodified 2159.1434 0.14337636 5004 Q9ULT8 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 6.17 3.85 2 1 3 3 1 1 1 89.986 87.874 2;3 4.593E-82 109003 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 192.32 136.19 59551000 0 52966000 0 0 0 0 0 0 0 2381600 0 0 0 721820 3481500 46565 5004 41761 390530;390531;390532;390533;390534;390535 307967;307968;307969;307970 307968 3 SGLNQIPNR Unmodified 997.53049 0.53049207 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 31.545 31.677 2 0.0095432 35010 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 66.429 43.387 40530000 0 0 0 3522600 3884100 0 3634900 3201300 3579000 3930400 5788500 0 0 5846600 7142900 46566 2930 41762 390536;390537;390538;390539;390540;390541;390542;390543;390544 307971;307972;307973;307974;307975;307976;307977;307978 307977 8 SGLNQIPNRR Unmodified 1153.6316 0.63160309 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.31 24.513 3 0.0039848 24911 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 52.579 36.714 333890000 0 0 0 26777000 23679000 25837000 29749000 27065000 19525000 23581000 19550000 45633000 23433000 35785000 33279000 46567 2930 41763 390545;390546;390547;390548;390549;390550;390551;390552;390553;390554;390555;390556 307979;307980;307981;307982;307983;307984;307985;307986 307986 2 SGLPDLILGK Unmodified 1011.5964 0.59644637 1457 P42566 EPS15 Epidermal growth factor receptor substrate 15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83.441 82.975 2 0.032576 103257 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 57.96 38.256 161370000 0 95186000 4698800 1511600 2554500 4616700 3315300 3034400 2155100 5588600 5434300 4942000 7521100 7112000 13699000 46568 1457 41764 390557;390558;390559;390560;390561;390562;390563;390564;390565;390566;390567;390568;390569;390570 307987;307988 307987 2 SGLPVGPENGVELSK Unmodified 1481.7726 0.77257283 863 P08240 SRPR Signal recognition particle receptor subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 66.52 66.675 2 0.0072509 76342 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 48.948 38.399 51181000 0 0 0 0 2886100 4272900 4255500 3940600 3029400 4827000 5483000 5158600 5765900 4542100 7020200 46569 863 41765 390571;390572;390573;390574;390575;390576;390577;390578;390579;390580;390581 307989;307990;307991;307992;307993;307994;307995 307992 6 SGLQGYDMSTFIR Oxidation (M) 1489.6871 0.68712864 2300 Q13492 PICALM Phosphatidylinositol-binding clathrin assembly protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 66.925 66.984 2 0.0014374 76875 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 59.84 43.949 89330000 0 0 0 4529600 0 8514100 12307000 10783000 8279000 11447000 12914000 0 9251000 11304000 0 46570 2300 41766 390582;390583;390584;390585;390586;390587;390588;390589;390590 307996;307997;307998;307999;308000 307997 3764 2 SGLQTDYATEK Unmodified 1211.567 0.56699673 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 30.04 30.143 2 0.0041481 32818 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 84.17 53.096 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46571 1492 41767 390591;390592 308001;308002 308001 2 SGLRVYSTSVTGSREIK Acetyl (Protein N-term) 1880.9956 0.99558991 4361 Q9H299 SH3BGRL3 SH3 domain-binding glutamic acid-rich-like protein 3 yes yes 1 0 2 By MS/MS 2 0 1 1 68.687 60.392 3 0.0080611 80875 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 41.386 30.616 14594000 14594000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46572 4361 41768 390593 308003 308003 0 SGLSDIILGK Unmodified 1001.5757 0.57571092 4836 Q9UBC2 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79.772 78.796 2 0.0026012 90755 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.972 50.55 329590000 97534000 123460000 18325000 6668200 3461300 5051400 4802800 5024000 4907600 7822200 8794300 7892400 7813200 9462500 18568000 46573 4836 41769 390594;390595;390596;390597;390598;390599;390600;390601;390602;390603;390604;390605;390606;390607;390608 308004;308005;308006;308007;308008;308009;308010;308011;308012;308013;308014;308015;308016 308008 12 SGLSDLAESLTNDNETNS Unmodified 1865.8127 0.81265932 3839 Q96FV9 THOC1 THO complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 8.86 2.82 1 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85.131 85.33 2 1.2115E-39 96506 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 141.88 136.8 191120000 9004600 9052500 0 4478100 8589200 10292000 10884000 11051000 11706000 18042000 25219000 25149000 12328000 15964000 19361000 46574 3839 41770 390609;390610;390611;390612;390613;390614;390615;390616;390617;390618;390619;390620;390621;390622 308017;308018;308019;308020;308021;308022;308023;308024;308025;308026 308020 10 SGLSSLAGAPSLK Unmodified 1186.6558 0.65575216 680 O95684 FGFR1OP FGFR1 oncogene partner yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66.506 65.731 2 7.9126E-06 86679 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.39 42.044 127030000 51938000 0 2095600 3828800 4377700 5519600 4867200 5716100 3604400 5375800 7294800 9243600 6172600 6803900 10196000 46575 680 41771 390623;390624;390625;390626;390627;390628;390629;390630;390631;390632;390633;390634;390635;390636 308027;308028;308029;308030;308031;308032;308033;308034;308035;308036;308037;308038 308032 12 SGLSSPIYIDLR Unmodified 1319.7085 0.70851601 936 P11172 UMPS Uridine 5'-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5'-phosphate decarboxylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 82.294 82.392 2 1.8487E-06 94496 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 114.4 92.953 74811000 0 0 0 0 3798300 0 3539400 0 4329400 12449000 6053900 0 5171900 11471000 27998000 46576 936 41772 390637;390638;390639;390640;390641;390642;390643;390644;390645;390646 308039;308040;308041;308042;308043;308044;308045;308046;308047;308048 308045 10 SGLTGYIK Unmodified 837.45962 0.45961853 4895 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 1 48.273 46.827 2 0.0068947 52415 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 91.9 53.108 1000900000 177850000 295220000 14511000 25383000 37188000 48425000 48578000 53220000 32206000 65573000 0 62869000 56770000 33060000 50014000 46577 4895 41773 390647;390648;390649;390650;390651;390652;390653;390654;390655;390656;390657;390658;390659;390660;390661 308049;308050;308051;308052;308053;308054;308055;308056;308057;308058;308059;308060;308061;308062 308051 14 SGLTVPTSPK Unmodified 985.54441 0.5444108 2696 Q53EL6 PDCD4 Programmed cell death protein 4 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 41.858 41.983 2 0.0028825 46845 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 79.148 51.623 171410000 0 0 0 9154100 7676200 14504000 11581000 12073000 8834900 22669000 24956000 26926000 16821000 16213000 0 46578 2696 41774 390662;390663;390664;390665;390666;390667;390668;390669;390670;390671;390672 308063;308064;308065;308066;308067;308068;308069;308070;308071 308065 4 SGLVPQQIK Unmodified 968.56548 0.56548059 2033 Q00341 HDLBP Vigilin yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 44.576 44.727 2 0.012405 49362 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.357 24.198 120500000 0 0 0 7145500 0 18723000 23411000 0 0 16933000 0 0 14119000 14828000 25345000 46579 2033 41775 390673;390674;390675;390676;390677;390678;390679 308072;308073 308073 2 SGMDMGIVNAGNLPVYDDIHK Unmodified 2245.0507 0.050738302 4049 Q99707 MTR Methionine synthase yes yes 0 0 0 By MS/MS 2 0 1 1 88.336 83.494 3 1.4806E-09 103737 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.932 81.065 62685000 0 62685000 0 0 0 0 0 0 0 0 0 0 0 0 0 46580 4049 41776 390680 308074 308074 1 SGMGENTSDPSRAETRK Acetyl (Protein N-term);Oxidation (M) 1879.833 0.83301761 2551 Q15596 NCOA2 Nuclear receptor coactivator 2 yes yes 1 1 2 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 11.396 11.494 3 8.6222E-05 10623 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 61.097 59.027 11122000 0 0 0 1473400 0 0 0 3090900 2044400 0 0 0 4513200 0 0 46581 2551 41777 390681;390682;390683;390684 308075 308075 4185 1 SGMIEYWTGPPHEYK Unmodified 1793.8083 0.80830641 3762 Q96BP3 PPWD1 Peptidylprolyl isomerase domain and WD repeat-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 80.014 71.884 3 0.036058 94253 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 21.534 15.097 29648000 29648000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46582 3762 41778 390685 308076 308076 1 SGMLESGIDR Unmodified 1063.4968 0.49680868 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 0 By MS/MS 10 0 1 1 39.956 40.697 2 0.045711 44303 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.327 36.385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46583 3443 41779 390686 308077 308077 1 SGMLQAEK Unmodified 862.42185 0.42185282 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18.47 18.172 2 0.0068474 17906 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 94.114 36.651 345900000 0 155570000 3225800 7661600 9073800 12836000 12001000 11120000 8670400 17280000 20725000 19973000 16625000 20175000 30960000 46584 965 41780 390687;390688;390689;390690;390691;390692;390693;390694;390695;390696;390697;390698;390699;390700 308078;308079;308080;308081;308082;308083;308084;308085;308086;308087;308088 308087 10 SGMLQAEK Oxidation (M) 878.41677 0.41676744 965 P12270 TPR Nucleoprotein TPR yes yes 0 1 0 By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By matching 10 0 18 2 2 2 2 2 2 1 2 1 1 1 7.0809 7.1721 2 0.028567 5444 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 86.794 29.33 132060000 0 0 0 9602300 9115500 12365000 11865000 10141000 9679500 9766200 25066000 9669300 11372000 0 13421000 46585 965 41780 390701;390702;390703;390704;390705;390706;390707;390708;390709;390710;390711;390712;390713;390714;390715;390716;390717;390718 308089;308090;308091 308090 0 SGMNSPLR Unmodified 860.41744 0.41743614 5074 Q9UQR1 ZNF148 Zinc finger protein 148 yes yes 0 0 0 By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 25.398 25.594 2 0.033162 27180 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 53.878 36.111 104720000 0 0 0 0 8132400 16779000 9176800 6312600 9087600 12580000 8271400 11322000 12318000 10743000 0 46586 5074 41781 390719;390720;390721;390722;390723;390724;390725;390726;390727;390728 308092 308092 1 SGMNSPLR Oxidation (M) 876.41235 0.41235077 5074 Q9UQR1 ZNF148 Zinc finger protein 148 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 11.727 11.797 2 0.021491 10883 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 54.205 35.579 21941000 0 0 0 0 3628100 0 4730200 3134000 0 5488800 0 0 4960400 0 0 46587 5074 41781 390729;390730;390731;390732;390733 308093;308094 308094 2 SGMRFNEVAAQYSEDK Oxidation (M) 1846.8156 0.81557663 5079 Q9Y237 PIN4 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 yes yes 0 1 1 By MS/MS 2 0 1 1 51.372 43.41 3 0.0035596 59726 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.365 43.081 114510000 114510000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46588 5079 41782 390734 308095 308095 6468 1 SGMRFNEVAAQYSEDK Unmodified 1830.8207 0.82066201 5079 Q9Y237 PIN4 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 63.697 56.91 2;3 0.0052503 76302 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.754 36.493 331540000 327270000 0 4270300 0 0 0 0 0 0 0 0 0 0 0 0 46589 5079 41782 390735;390736;390737 308096;308097;308098;308099 308096 4 SGMSHEEDQLIPNLYR Oxidation (M) 1903.8734 0.87342586 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 2 1 69.957 70.123 2;3 2.0968E-06 80778 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 78.505 77.479 72946000 0 0 0 0 0 14299000 0 11787000 0 13058000 0 20389000 0 13413000 0 46590 2930 41783 390738;390739;390740;390741;390742;390743 308100;308101;308102;308103;308104;308105 308101 4559 5 SGMVQTEAQYR Unmodified 1268.5819 0.58193529 2122 Q06124 PTPN11 Tyrosine-protein phosphatase non-receptor type 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 31.254 31.525 2 0.0079706 33165 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 64.654 44.324 12935000 0 0 0 0 0 0 0 4722700 0 0 0 0 2998700 5213800 0 46591 2122 41784 390744;390745;390746 308106;308107;308108 308107 3 SGMYVVIEVK Oxidation (M) 1139.5896 0.58964643 476 O75223 GGCT Gamma-glutamylcyclotransferase yes yes 0 1 0 By MS/MS 2 0 1 1 68.845 60.55 2 0.016653 81044 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.305 49.866 5690800 5690800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46592 476 41785 390747 308109;308110 308110 600 2 SGNALFHASTLHR Unmodified 1409.7164 0.71639536 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 39.121 39.362 3 0.01115 42732 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 31.389 24.468 77792000 0 0 0 2700000 0 8096500 3218500 7995900 4764200 5288600 6412800 10453000 8414100 5444100 15005000 46593 2378 41786 390748;390749;390750;390751;390752;390753;390754;390755;390756;390757;390758 308111;308112;308113 308113 3 SGNELPLAVASTADLIR Unmodified 1725.9261 0.92611336 5211 Q9Y4W2 LAS1L Ribosomal biogenesis protein LAS1L yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 89.323 89.432 2 0.00022725 103810 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 75.479 67.912 44704000 0 0 0 0 2520300 2879700 2270300 3142600 2334600 6080300 4130100 4176700 3023300 4601900 9543800 46594 5211 41787 390759;390760;390761;390762;390763;390764;390765;390766;390767;390768;390769 308114;308115;308116;308117;308118;308119;308120;308121;308122;308123 308115 10 SGNGNAAATAEENSPK Acetyl (Protein N-term) 1558.6859 0.68594267 865 P08397 HMBS Porphobilinogen deaminase yes yes 1 0 0 By MS/MS By MS/MS By MS/MS 4 4.24 2 1 1 1 1 62.577 79.631 2 0.00010168 28904 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.772 76.54 3341800 2387700 954120 0 0 0 0 0 0 0 0 0 0 0 0 0 46595 865 41788 390770;390771;390772 308124;308125;308126;308127 308124 4 SGNIINMSSVASSVK Unmodified 1492.7555 0.75554256 4170 Q9BUT1 BDH2 3-hydroxybutyrate dehydrogenase type 2 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 77.185 71.698 2 0.00061221 90574 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.639 42.047 168950000 37579000 131370000 0 0 0 0 0 0 0 0 0 0 0 0 0 46596 4170 41789 390773;390774;390775 308128;308129;308130 308128 3 SGNIINMSSVASSVK Oxidation (M) 1508.7505 0.75045718 4170 Q9BUT1 BDH2 3-hydroxybutyrate dehydrogenase type 2 yes yes 0 1 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 54.979 48.698 2 0.0029881 65782 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.161 42.931 36665000 8728700 27936000 0 0 0 0 0 0 0 0 0 0 0 0 0 46597 4170 41789 390776;390777;390778 308131;308132 308132 5666 2 SGNIPAGTTVDTK Unmodified 1259.6357 0.635745 4977 Q9UKV8 AGO2 Protein argonaute-2 yes yes 0 0 0 By MS/MS 10 0 1 1 28.933 29.251 2 0.041749 30557 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 47.844 5.9678 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46598 4977 41790 390779 308133 308133 1 SGNIVAGIANESK Unmodified 1258.6517 0.65172941 1612 P49915 GMPS GMP synthase [glutamine-hydrolyzing] yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 49.358 49.057 2 3.59E-05 54336 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 89.301 69.16 953730000 0 129160000 0 31911000 25392000 108600000 39064000 33324000 36142000 66099000 95273000 93955000 55059000 58704000 181040000 46599 1612 41791 390780;390781;390782;390783;390784;390785;390786;390787;390788;390789;390790;390791;390792 308134;308135;308136;308137;308138;308139;308140;308141;308142;308143;308144 308139 10 SGNIVAGIANESKK Unmodified 1386.7467 0.74669243 1612 P49915 GMPS GMP synthase [glutamine-hydrolyzing] yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 40.348 40.758 3 0.0057364 44812 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 27.643 10.276 34527000 0 0 0 0 0 0 2239300 0 0 3980800 5168300 10112000 0 3735600 9290700 46600 1612 41792 390793;390794;390795;390796;390797;390798 308145;308146 308146 2 SGNLTEDDK Unmodified 977.43017 0.4301689 986 P13797 PLS3 Plastin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.88 4.04 1 2 5 1 2 1 1 1 1 1 19.73 19.044 2 0.00076393 100033 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 120.12 67.403 256390000 59030000 182390000 0 0 1398200 3952500 3379300 2545600 0 0 0 0 0 0 3696800 46601 986 41793 390799;390800;390801;390802;390803;390804;390805;390806 308147;308148;308149;308150;308151;308152;308153 308153 7 SGNMIQSANDK Oxidation (M) 1179.519 0.51900068 3094 Q7Z460 CLASP1 CLIP-associating protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 2 2 2 2 2 7.0633 7.2166 2 0.00074734 5125 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 74.841 57.601 38629000 0 0 0 0 0 1672800 5139400 0 0 6781700 10252000 7291500 7490800 0 0 46602 3094 41794 390807;390808;390809;390810;390811;390812;390813;390814;390815;390816;390817 308154;308155;308156;308157;308158;308159 308155 4704 6 SGNMIQSANDK Unmodified 1163.5241 0.52408606 3094 Q7Z460 CLASP1 CLIP-associating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 16.524 16.434 2 0.00033372 16224 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 96.342 84.295 60864000 0 8158700 0 0 0 5607600 3291000 3937600 3482300 4640700 4861400 6738700 5226200 5131800 9788100 46603 3094 41794 390818;390819;390820;390821;390822;390823;390824;390825;390826;390827;390828 308160;308161;308162;308163;308164;308165;308166;308167;308168;308169;308170 308169 11 SGNPTRNCLEK Unmodified 1274.6037 0.60373336 1325 P32929 CTH Cystathionine gamma-lyase yes yes 0 0 1 By MS/MS By matching 2 0 2 1 1 14.053 10.888 3 0.013637 16008 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.976 30.36 42567000 36961000 0 5606000 0 0 0 0 0 0 0 0 0 0 0 0 46604 1325 41795 390829;390830 308171 308171 1 SGNQVSEFISNTFLDK Unmodified 1784.8581 0.85809337 2159 Q08499 PDE4D cAMP-specific 3',5'-cyclic phosphodiesterase 4D yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 88.998 89.139 2 0.0032638 103135 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.167 49.635 13744000 0 0 0 0 0 0 0 0 0 3159900 1358700 0 0 2038900 7186500 46605 2159 41796 390831;390832;390833;390834 308172;308173;308174 308173 3 SGNQVSEYISR Unmodified 1238.5891 0.58912916 2158 Q08493 PDE4C cAMP-specific 3',5'-cyclic phosphodiesterase 4C yes yes 0 0 0 By matching By MS/MS By matching 10 0 3 1 1 1 11.626 11.939 3 0.022914 10869 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 30.872 12.092 7214700 0 0 0 0 0 0 0 0 0 0 0 728280 4435300 0 2051100 46606 2158 41797 390835;390836;390837 308175 308175 1 SGNTDKPRPPPLPSEPPPPLPPLPK Unmodified 2624.4326 0.43262251 412 O60563 CCNT1 Cyclin-T1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 79.074 79.231 4 1.3085E-12 90747 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 62.064 59.141 91379000 0 0 0 0 0 0 4570600 9718000 0 15751000 10484000 14862000 7506500 9656400 18830000 46607 412 41798 390838;390839;390840;390841;390842;390843;390844;390845 308176;308177;308178;308179;308180;308181;308182;308183;308184;308185 308183 10 SGNTGIATTFINK Unmodified 1322.683 0.68302954 4941 Q9UJV9 DDX41 Probable ATP-dependent RNA helicase DDX41 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 59.29 59.473 2 0.00072651 67648 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 90.913 57.651 70082000 0 0 0 0 5245600 6933900 7240800 3354200 0 8746500 6921500 10112000 6202200 6714500 8610300 46608 4941 41799 390846;390847;390848;390849;390850;390851;390852;390853;390854;390855 308186;308187;308188;308189;308190;308191 308187 5 SGNVAELALK Unmodified 1000.5553 0.55530983 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.369 51.518 2 0.0015449 57697 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 93.111 54.692 841570000 0 0 0 34971000 32714000 47893000 49573000 48119000 29927000 57554000 116360000 94397000 52063000 83138000 194850000 46609 1564 41800 390856;390857;390858;390859;390860;390861;390862;390863;390864;390865;390866;390867 308192;308193;308194;308195;308196;308197;308198;308199;308200;308201;308202;308203;308204;308205;308206 308204 15 SGNVHHQFQK Unmodified 1180.5738 0.57375386 1251;1545 P29508;P48594 SERPINB3;SERPINB4 Serpin B3;Serpin B4 no no 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 12 2 2 1 2 1 1 1 1 1 5.8404 5.8783 2;3 6.3148E-08 3432 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 153.05 109.92 253970000 0 0 0 224980000 7291700 1132500 8021000 1650500 661730 687780 558640 8984200 0 0 0 46610 1251;1545 41801 390868;390869;390870;390871;390872;390873;390874;390875;390876;390877;390878;390879 308207;308208;308209 308208 3 SGNYSGHSDGISSSR Unmodified 1509.6444 0.6444122 2776 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.83 11.95 3 0.0016789 10498 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 46.892 43.807 46100000 0 0 0 3475300 3079500 2775700 3718200 4067100 3614100 4731300 0 6764600 4500700 4293800 5079600 46611 2776 41802 390880;390881;390882;390883;390884;390885;390886;390887;390888;390889;390890 308210;308211;308212;308213;308214;308215 308215 6 SGPASTFNDR Unmodified 1050.473 0.47303677 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 21.854 22.064 2 0.0071865 22507 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 63.076 52.366 162520000 0 0 0 10126000 10977000 18880000 10803000 0 7810100 15407000 16890000 19594000 13064000 15668000 23304000 46612 4819 41803 390891;390892;390893;390894;390895;390896;390897;390898;390899;390900;390901 308216;308217;308218;308219;308220;308221;308222 308221 6 SGPEAPEWYQVELK Unmodified 1631.7831 0.78313752 3530 Q8WTS6 SETD7 Histone-lysine N-methyltransferase SETD7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 3 6 1 1 1 1 1 1 1 1 1 80.173 78.566 2 4.6008E-13 90953 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.08 88.682 394130000 9399000 315880000 5823500 0 0 0 0 0 0 7120400 9402700 8159700 7580400 7836200 22928000 46613 3530 41804 390902;390903;390904;390905;390906;390907;390908;390909;390910 308223;308224;308225;308226;308227;308228;308229;308230 308225 7 SGPEPLQEGPGPK Unmodified 1291.6408 0.64083038 1796 P57737 CORO7 Coronin-7 yes yes 0 0 0 By MS/MS 10 0 1 1 34.683 35.41 2 0.029943 37968 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.466 39.76 7502300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7502300 46614 1796 41805 390911 308231 308231 1 SGPGLIGLGIK Unmodified 1010.6124 0.61243078 2947 Q6PGP7 TTC37 Tetratricopeptide repeat protein 37 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 77.264 76.139 2 0.0043491 87213 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.691 21.742 296320000 107070000 82760000 19203000 4191300 2660300 7327300 3744800 4954300 3484700 8010800 9248200 9065500 5526000 7008700 22060000 46615 2947 41806 390912;390913;390914;390915;390916;390917;390918;390919;390920;390921;390922;390923;390924;390925;390926;390927 308232;308233;308234;308235;308236;308237;308238;308239;308240;308241;308242;308243;308244;308245;308246;308247 308238 16 SGPIFIVVPNGK Unmodified 1226.7023 0.70230842 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.93 2.63 1 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80.459 79.696 2 0.002251 101310 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.522 75.609 224940000 29288000 2011300 0 11167000 10748000 12240000 14206000 15088000 12033000 18469000 19400000 27801000 15565000 15438000 21485000 46616 2361 41807 390928;390929;390930;390931;390932;390933;390934;390935;390936;390937;390938;390939;390940;390941 308248;308249;308250;308251;308252;308253;308254;308255;308256;308257;308258 308252 5 SGPLFNFDVHDDVR Unmodified 1616.7583 0.75831975 2403 Q14320 FAM50A Protein FAM50A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 78.494 78.598 3 0.0012504 90674 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 52.823 48.022 97827000 0 0 0 0 2686900 8169000 2895900 4834600 9989000 6567900 10659000 7515800 4840900 6907000 32761000 46617 2403 41808 390942;390943;390944;390945;390946;390947;390948;390949;390950;390951;390952 308259;308260;308261;308262;308263;308264;308265;308266 308259 5 SGPLFNFDVHDDVRLLSDATVEK Unmodified 2573.2762 0.27618145 2403 Q14320 FAM50A Protein FAM50A yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 2 2 3 1 95.068 89.316 3;4 7.494E-15 113687 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.79 74.016 123190000 121300000 1888000 0 0 0 0 0 0 0 0 0 0 0 0 0 46618 2403 41809 390953;390954;390955;390956 308267;308268;308269;308270;308271;308272 308269 5 SGPLPSSSGSSSSSSQLSVATLGR Unmodified 2235.0979 0.097882729 3156 Q86UU1 PHLDB1 Pleckstrin homology-like domain family B member 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 70.856 71.066 3 0.025048 81728 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 19.324 10.04 28070000 0 0 0 0 0 0 4489000 0 0 4538900 7240400 6331200 0 5470600 0 46619 3156 41810 390957;390958;390959;390960;390961 308273;308274 308274 2 SGPNTQNEDIEK Unmodified 1330.6001 0.60008777 2437 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 15.409 15.58 2 5.8984E-06 14364 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.39 89.867 33985000 0 0 0 2057000 1714200 2377100 2384400 0 1423800 3237900 3987400 4595300 3801100 4268000 4138400 46620 2437 41811 390962;390963;390964;390965;390966;390967;390968;390969;390970;390971;390972 308275;308276;308277;308278;308279;308280;308281;308282 308278 8 SGPPAPEEEEEEERQSGNTEQK Unmodified 2456.0575 0.057534057 4633 Q9NTI5 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.24 2 1 10 1 2 1 1 1 1 1 1 1 1 1 1 27.452 26.532 3 1.3067E-05 28787 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 50.425 45.424 176130000 35287000 53364000 0 0 4261800 11498000 6087600 0 5660900 8793300 13861000 12463000 7948900 6995300 9910700 46621 4633 41812 390973;390974;390975;390976;390977;390978;390979;390980;390981;390982;390983;390984;390985 308283;308284;308285;308286;308287;308288;308289;308290;308291;308292;308293;308294;308295;308296;308297;308298;308299;308300 308286 18 SGPPPSSGMSSR Unmodified 1145.5135 0.51352137 4639 Q9NTZ6 RBM12 RNA-binding protein 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.538 13.699 2 0.0177 12705 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 60.518 51.656 48063000 0 0 0 2797600 2716500 3690200 2910600 2277200 1879800 4034400 3324700 5714800 4321000 5585200 8811200 46622 4639 41813 390986;390987;390988;390989;390990;390991;390992;390993;390994;390995;390996;390997 308301 308301 0 SGPQILTPLGDR Unmodified 1252.6776 0.67755023 4802 Q9P206 KIAA1522 Uncharacterized protein KIAA1522 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.962 69.042 2 0.0013151 79291 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 68.893 37.819 55108000 0 0 0 4409800 4609400 5631500 4133100 3256100 3154700 4862500 4525500 4092200 5525200 4146500 6761100 46623 4802 41814 390998;390999;391000;391001;391002;391003;391004;391005;391006;391007;391008;391009 308302;308303;308304;308305;308306;308307;308308;308309;308310;308311;308312;308313 308308 12 SGPQSASTAVK Unmodified 1031.5247 0.52473799 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 10.803 10.975 2 0.00033061 9695 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 96.143 73.651 119830000 0 0 0 0 12172000 16858000 0 15258000 0 16591000 4297000 0 20878000 24142000 9634300 46624 4139 41815 391010;391011;391012;391013;391014;391015;391016;391017 308314;308315;308316;308317;308318;308319 308316 5 SGPRPVVLSGPSGAGK Acetyl (Protein N-term) 1506.8154 0.8154407 2634 Q16774 GUK1 Guanylate kinase yes yes 1 0 1 By MS/MS 10 0 1 1 51.404 52.1 2 9.4749E-08 57955 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 109.84 83.172 7597900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7597900 46625 2634 41816 391018 308320 308320 1 SGPSEVTGSDASGPDPQLAVTMGFTGFGK Unmodified 2796.2912 0.29123916 4693 Q9NW82 WDR70 WD repeat-containing protein 70 yes yes 0 0 0 By MS/MS 2 0 1 1 94.121 89.225 3 2.3252E-06 110669 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 24.907 17.461 24240000 0 24240000 0 0 0 0 0 0 0 0 0 0 0 0 0 46626 4693 41817 391019 308321;308322 308321 2 SGPSEVTGSDASGPDPQLAVTMGFTGFGK Oxidation (M) 2812.2862 0.28615378 4693 Q9NW82 WDR70 WD repeat-containing protein 70 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 83.983 84.076 3 4.677E-19 97299 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 58.26 51.148 37241000 0 0 0 0 7005000 0 0 5719700 7739100 0 0 7598100 0 0 9178900 46627 4693 41817 391020;391021;391022;391023;391024 308323;308324;308325;308326;308327 308325 6095 5 SGPSPLSSPNGK Unmodified 1126.5619 0.56185177 472 O75179 ANKRD17 Ankyrin repeat domain-containing protein 17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.314 24.517 2 0.00061664 24698 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.943 33.86 89554000 0 0 0 4981400 3749300 6743500 8659300 6751100 6187600 6526700 8106700 10398000 8963900 8046200 10441000 46628 472 41818 391025;391026;391027;391028;391029;391030;391031;391032;391033;391034;391035;391036 308328;308329;308330;308331;308332;308333;308334;308335;308336;308337;308338;308339 308331 12 SGPSTVSEPAK Unmodified 1058.5244 0.52440364 2935 Q6P4R8 NFRKB Nuclear factor related to kappa-B-binding protein yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 14.332 14.522 2 0.0085147 13897 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 51.445 33.977 48258000 0 0 0 0 3403800 4268500 3109900 4273700 2768300 5227400 3656900 4940900 6472700 4861300 5274700 46629 2935 41819 391037;391038;391039;391040;391041;391042;391043;391044;391045;391046;391047 308340 308340 1 SGPSVPVSVQTK Unmodified 1184.6401 0.6401021 5123 Q9Y2W2 WBP11 WW domain-binding protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44.772 43.963 2 3.6638E-05 50002 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 90.913 58.593 549960000 17225000 121430000 0 23473000 45368000 33705000 35811000 34232000 28427000 22030000 39157000 56921000 26434000 30993000 34753000 46630 5123 41820 391048;391049;391050;391051;391052;391053;391054;391055;391056;391057;391058;391059;391060;391061 308341;308342;308343;308344;308345;308346;308347;308348;308349;308350;308351;308352;308353;308354;308355;308356 308356 15 SGPTDDGEEEMEEDTVTNGS Unmodified 2097.7804 0.7804325 892 P09661 SNRPA1 U2 small nuclear ribonucleoprotein A' yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 48.545 48.503 2 3.9097E-05 54654 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 83.182 83.182 32428000 0 0 0 6373700 5002900 0 0 4929000 0 7557700 0 0 3849400 4715400 0 46631 892 41821 391062;391063;391064;391065;391066;391067 308357 308357 1 SGPTDDGEEEMEEDTVTNGS Oxidation (M) 2113.7753 0.77534712 892 P09661 SNRPA1 U2 small nuclear ribonucleoprotein A' yes yes 0 1 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 35.384 35.639 2 4.4003E-05 39173 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 51.841 51.841 34213000 0 0 0 0 2227100 3027400 5061000 2945500 0 0 3725100 6713100 6731000 0 3782300 46632 892 41821 391068;391069;391070;391071;391072;391073;391074;391075 308358;308359 308359 1144 2 SGPVILADEIK Unmodified 1140.639 0.63903946 1712 P53367 ARFIP1 Arfaptin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 70.407 69.688 2 0.0032462 80651 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 64.374 50.256 839080000 0 594860000 11692000 10370000 9555700 17248000 15479000 16294000 11231000 24702000 26012000 30911000 21874000 16309000 32546000 46633 1712 41822 391076;391077;391078;391079;391080;391081;391082;391083;391084;391085;391086;391087;391088;391089;391090 308360;308361;308362;308363;308364;308365;308366;308367;308368;308369;308370;308371;308372 308371 13 SGPVMGGGLPPPPIK Unmodified 1402.7643 0.76425675 4251 Q9BYJ9 YTHDF1 YTH domain-containing family protein 1 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS 8.4 3.2 1 4 1 1 1 1 1 75.43 74.453 2 2.3572E-06 92640 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.95 86.325 40764000 0 26058000 0 2694100 0 0 1942400 0 0 4639400 0 0 0 5429500 0 46634 4251 41823 391091;391092;391093;391094;391095 308373;308374 308373 2 SGQFAEAAGK Unmodified 964.46141 0.46140945 2137 Q07617 SPAG1 Sperm-associated antigen 1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 15.968 16.218 2 0.041377 15491 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 39.622 27.266 25191000 0 0 0 0 0 0 3064700 2442700 1692000 2483700 5414000 4687400 5406600 0 0 46635 2137 41824 391096;391097;391098;391099;391100;391101;391102 308375 308375 1 SGQGAFGNMCR Oxidation (M) 1199.4812 0.48117539 1377 P36578 RPL4 60S ribosomal protein L4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 15.519 15.708 2 0.0013681 14512 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.375 63.272 75574000 0 0 0 3964000 4230400 2270900 0 6708600 0 6049600 7210700 13418000 10544000 11330000 9847600 46636 1377 41825 391103;391104;391105;391106;391107;391108;391109;391110;391111;391112 308376;308377;308378;308379;308380 308376 2135 5 SGQGAFGNMCR Unmodified 1183.4863 0.48626077 1377 P36578 RPL4 60S ribosomal protein L4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 31.63 31.896 2 0.0057542 34751 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 72.042 68.107 70928000 0 0 0 4648500 0 7824200 0 4992200 0 0 0 16801000 11904000 9964900 14794000 46637 1377 41825 391113;391114;391115;391116;391117;391118;391119 308381;308382;308383 308382 3 SGQGDALASGPVETGPMK Unmodified 1700.8039 0.80394931 1454 P42345 MTOR Serine/threonine-protein kinase mTOR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 51.596 51.868 2 5.1854E-26 57612 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 105.03 93.816 29142000 0 0 0 0 0 3755800 3311300 0 2139800 0 6048700 0 0 7034200 6852200 46638 1454 41826 391120;391121;391122;391123;391124;391125;391126 308384;308385;308386;308387;308388;308389 308386 6 SGQGDALASGPVETGPMK Oxidation (M) 1716.7989 0.79886394 1454 P42345 MTOR Serine/threonine-protein kinase mTOR yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 40.379 40.556 2 1.6042E-07 44739 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 79.089 50.911 34007000 0 0 0 2384100 2777000 0 3331400 2751700 2411500 3974200 3838500 4858000 0 4199300 3481500 46639 1454 41826 391127;391128;391129;391130;391131;391132;391133;391134;391135;391136 308390;308391;308392;308393 308392 2288 4 SGQSALYDALFSSQSPK Unmodified 1784.8581 0.85809337 1601;32 P49792;A6NKT7;Q7Z3J3 RANBP2;RGPD3;RGPD4 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 3;RanBP2-like and GRIP domain-containing protein 4 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 2 2 2 2 2 2 1 1 1 1 2 83.069 83.188 2;3 2.4957E-07 96297 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 75.669 60.793 124030000 0 0 0 0 2759900 10331000 5862000 11267000 7171900 16157000 11716000 11277000 9036600 8006800 30450000 46640 1601;32 41827 391137;391138;391139;391140;391141;391142;391143;391144;391145;391146;391147;391148;391149;391150;391151;391152;391153;391154 308394;308395;308396;308397;308398;308399;308400;308401 308399 3 SGQSLTDR Acetyl (Protein N-term) 904.42502 0.42502394 2300 Q13492 PICALM Phosphatidylinositol-binding clathrin assembly protein yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 21.486 21.7 2 0.0030163 22595 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 83.206 54.057 135180000 0 0 0 8279000 7731600 9429700 15602000 0 0 15814000 15737000 13216000 11498000 17365000 20513000 46641 2300 41828 391155;391156;391157;391158;391159;391160;391161;391162;391163;391164 308402;308403;308404 308403 3 SGQSLTDRITAAQHSVTGSAVSK Acetyl (Protein N-term) 2342.1826 0.18261541 2300 Q13492 PICALM Phosphatidylinositol-binding clathrin assembly protein yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 72.062 71.352 3 6.1197E-113 82167 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 177.03 154.13 290740000 8172600 0 0 0 9842000 18078000 0 27643000 26176000 42537000 0 36738000 20100000 25138000 76315000 46642 2300 41829 391165;391166;391167;391168;391169;391170;391171;391172;391173;391174 308405;308406;308407;308408;308409;308410;308411;308412;308413;308414;308415;308416 308410 12 SGQSSRGEQHGSSSGSSSSYGQHGSGSR Unmodified 2724.1469 0.14685162 104 CON__Q86YZ3;Q86YZ3 HRNR Hornerin yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 1 2 2 2 2 2 2 2 2 2 2 2 5.5553 5.6831 4;5 2.9172E-249 2931 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 214.47 212.16 + 3100000000 0 0 0 123880000 102410000 245090000 168140000 770320000 123330000 291200000 231640000 380620000 387200000 167140000 109010000 46643 104 41830 391175;391176;391177;391178;391179;391180;391181;391182;391183;391184;391185;391186;391187;391188;391189;391190;391191;391192;391193;391194;391195;391196;391197 308417;308418;308419;308420;308421;308422;308423;308424;308425;308426;308427;308428;308429 308420 13 SGQSSRSEQHGSSSGSSSSYGQHGSGSR Unmodified 2754.1574 0.15741631 104 CON__Q86YZ3;Q86YZ3 HRNR Hornerin yes no 0 0 1 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 5.5635 5.6679 4 0.025244 3628 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 23.566 23.566 + 21389000 0 0 0 3382900 0 0 0 0 0 0 1967500 9947200 6091800 0 0 46644 104 41831 391198;391199;391200;391201 308430 308430 0 SGQSSYGQHSSGSSQSSGYGQHGSR Unmodified 2499.0395 0.039533002 95 CON__Q5D862;Q5D862 FLG2 Filaggrin-2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 3 1 2 2 2 2 2 2 2 2 7.9502 8.0815 3;4 4.3788E-97 6660 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 150.91 146.96 + 722900000 0 0 0 82306000 15338000 17638000 4232400 100190000 20383000 48424000 89246000 123640000 145940000 52580000 22979000 46645 95 41832 391202;391203;391204;391205;391206;391207;391208;391209;391210;391211;391212;391213;391214;391215;391216;391217;391218;391219;391220;391221;391222;391223;391224;391225 308431;308432;308433;308434;308435;308436;308437;308438;308439;308440;308441;308442;308443;308444;308445 308443 14 SGQSYSPSRVLITENDVK Unmodified 1978.996 0.99598384 3983 Q96S55 WRNIP1 ATPase WRNIP1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 5 2 1 2 65.119 59.113 2;3 1.1631E-20 73308 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 103.5 94.217 181610000 132270000 19153000 30185000 0 0 0 0 0 0 0 0 0 0 0 0 46646 3983 41833 391226;391227;391228;391229;391230 308446;308447;308448;308449 308449 4 SGQVEHLQQETAALK Unmodified 1637.8373 0.83729835 2155 Q08378 GOLGA3 Golgin subfamily A member 3 yes yes 0 0 0 By MS/MS By MS/MS 2.4 0.49 3 2 3 2 49.839 45.17 2;3 1.8816E-42 59218 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 153.09 112.59 69769000 0 43270000 26499000 0 0 0 0 0 0 0 0 0 0 0 0 46647 2155 41834 391231;391232;391233;391234;391235 308450;308451;308452;308453;308454;308455 308450 5 SGQVYSFGCNDEGALGRDTSVEGSEMVPGK Oxidation (M) 3148.3714 0.37135675 1078 P18754 RCC1 Regulator of chromosome condensation yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 72.653 68.435 3 1.102E-103 86276 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 135.84 133.4 78591000 0 70130000 8461600 0 0 0 0 0 0 0 0 0 0 0 0 46648 1078 41835 391236;391237 308456 308456 1555 1 SGQVYSFGCNDEGALGRDTSVEGSEMVPGK Unmodified 3132.3764 0.37644213 1078 P18754 RCC1 Regulator of chromosome condensation yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 77.545 72.758 3 5.3027E-44 91564 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.46 87.493 189790000 14893000 168640000 6263900 0 0 0 0 0 0 0 0 0 0 0 0 46649 1078 41835 391238;391239;391240;391241 308457;308458;308459;308460;308461 308458 5 SGRGGNFGFGDSR Unmodified 1312.5909 0.59086049 1141 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.956 31.145 3 0.0012498 32530 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.527 41.162 447280000 0 0 0 15522000 15491000 16997000 28432000 29178000 21294000 28595000 55239000 63215000 28625000 33458000 111230000 46650 1141 41836 391242;391243;391244;391245;391246;391247;391248;391249;391250;391251;391252;391253 308462;308463;308464;308465;308466;308467;308468;308469;308470;308471;308472;308473;308474 308466 13 SGRPMASGYGR Unmodified 1137.5349 0.53492552 5011 Q9ULX6 AKAP8L A-kinase anchor protein 8-like yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.382 13.538 3 0.005728 12424 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 42.809 31.216 57222000 0 0 0 2573200 2666600 2338400 2781000 2736900 2886800 5254200 5939300 8354400 6276300 4292400 11122000 46651 5011 41837 391254;391255;391256;391257;391258;391259;391260;391261;391262;391263;391264;391265 308475;308476;308477;308478;308479;308480;308481;308482;308483 308478 9 SGRSYHEEFNPPK Unmodified 1546.7165 0.71645494 1748 P54819 AK2 Adenylate kinase 2, mitochondrial;Adenylate kinase 2, mitochondrial, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 4 2 4 2 33.852 28.942 3;4 2.2686E-08 40190 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.075 88.075 542590000 525820000 0 16770000 0 0 0 0 0 0 0 0 0 0 0 0 46652 1748 41838 391266;391267;391268;391269;391270;391271 308484;308485;308486;308487;308488;308489 308487 5 SGSALELSVENVK Unmodified 1331.6933 0.69325988 532 O75688 PPM1B Protein phosphatase 1B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.25 3.34 2 1 1 2 1 1 67.885 64.463 2 0.00059139 81771 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.77 119.06 158430000 0 145340000 2133900 0 0 0 0 0 0 0 0 0 0 0 10956000 46653 532 41839 391272;391273;391274;391275 308490;308491;308492;308493 308491 3 SGSALLQSQSSTEDPK Unmodified 1633.7795 0.7795087 2816 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 34.99 35.161 2 1.7754E-11 37616 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 121.02 103.21 49258000 0 0 0 2874800 1431000 11791000 3270100 2389200 0 5311300 4064500 5437100 0 5591700 7097000 46654 2816 41840 391276;391277;391278;391279;391280;391281;391282;391283;391284;391285 308494;308495;308496;308497;308498;308499;308500;308501;308502;308503 308497 10 SGSALLQSQSSTEDPKDEPAELKPDSEDLSSQSSASK Unmodified 3834.7767 0.77667433 2816 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.338 60.443 4 4.8765E-182 68416 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 157.88 153.48 254230000 0 0 0 9875800 17857000 12284000 20258000 23563000 14507000 24885000 25887000 31302000 26355000 18189000 29262000 46655 2816 41841 391286;391287;391288;391289;391290;391291;391292;391293;391294;391295;391296;391297 308504;308505;308506;308507;308508;308509;308510;308511;308512;308513;308514;308515;308516;308517;308518;308519;308520;308521;308522 308511 19 SGSAPILK Unmodified 771.44905 0.44905385 4003 Q96TA1 FAM129B Niban-like protein 1 yes yes 0 0 0 By MS/MS 3 0 1 1 27.503 23.287 2 0.02908 29128 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 77.058 23.536 17717000 0 17717000 0 0 0 0 0 0 0 0 0 0 0 0 0 46656 4003 41842 391298 308523 308523 1 SGSDAGEARPPTPASPR Unmodified 1651.7914 0.79141079 3838 Q96FS4 SIPA1 Signal-induced proliferation-associated protein 1 yes yes 0 0 1 By MS/MS 10 0 1 1 24.924 25.598 3 0.041022 26228 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 24.594 16.417 6769400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6769400 46657 3838 41843 391299 308524 308524 1 SGSDEVQVGQQR Unmodified 1288.6008 0.60075648 741 P01024 C3 Complement C3;Complement C3 beta chain;C3-beta-c;Complement C3 alpha chain;C3a anaphylatoxin;Acylation stimulating protein;Complement C3b alpha' chain;Complement C3c alpha' chain fragment 1;Complement C3dg fragment;Complement C3g fragment;Complement C3d fragment;Complement C3f fragment;Complement C3c alpha' chain fragment 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching 10 0 5 1 1 1 1 1 17.854 18.058 2 1.0554E-06 18403 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 116.05 103.01 19730000 0 0 0 6221000 0 0 0 6066800 0 2845300 0 1930800 2666200 0 0 46658 741 41844 391300;391301;391302;391303;391304 308525;308526;308527 308527 3 SGSFELSVQDLNDLLSDGSGCYSLPSQPCNEVTPR Acetyl (Protein N-term) 3869.736 0.73601227 1653 P51452 DUSP3 Dual specificity protein phosphatase 3 yes yes 1 0 0 By MS/MS 2 0 1 1 100.41 95.696 3 3.1633E-22 118327 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.902 63.554 13080000 0 13080000 0 0 0 0 0 0 0 0 0 0 0 0 0 46659 1653 41845 391305 308528 308528 1 SGSGQSSGFGQHGSGSGQSSGFGQHESGSGK Unmodified 2853.1935 0.19346746 95 CON__Q5D862;Q5D862 FLG2 Filaggrin-2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 2 1 1 1 2 1 1 1 2 1 20.834 20.961 3;4 3.8092E-47 21709 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 90.363 90.362 + 188250000 0 0 0 43795000 9655900 13607000 12027000 35148000 5893100 13241000 0 19814000 24883000 10189000 0 46660 95 41846 391306;391307;391308;391309;391310;391311;391312;391313;391314;391315;391316;391317;391318 308529;308530;308531;308532;308533;308534;308535;308536;308537;308538;308539;308540;308541 308539 13 SGSGQSSGYSQHGSGSSHSSGYR Unmodified 2242.9224 0.92237798 104 CON__Q86YZ3;Q86YZ3 HRNR Hornerin yes no 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching 10 0 21 2 2 2 2 2 1 2 2 2 2 1 1 6.8264 6.9321 3;4 1.235E-20 4792 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 88.09 84.992 + 84995000 0 0 0 8187000 4383000 5867800 3489100 18757000 1223000 10065000 7542900 6740600 11667000 2421400 4652300 46661 104 41847 391319;391320;391321;391322;391323;391324;391325;391326;391327;391328;391329;391330;391331;391332;391333;391334;391335;391336;391337;391338;391339 308542;308543;308544;308545;308546 308543 5 SGSGQSSGYSQHGSGSSHSSGYRK Unmodified 2371.0173 0.017340997 104 CON__Q86YZ3;Q86YZ3 HRNR Hornerin yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 5.7907 5.9081 4;5 1.9861E-94 3576 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 125.58 108.43 + 359080000 0 0 0 31128000 4807500 20094000 7358200 79203000 12079000 37920000 19915000 37578000 52307000 32678000 24011000 46662 104 41848 391340;391341;391342;391343;391344;391345;391346;391347;391348;391349;391350;391351;391352;391353;391354;391355;391356;391357;391358;391359;391360;391361;391362;391363 308547;308548;308549;308550;308551;308552;308553;308554;308555;308556;308557;308558;308559;308560;308561 308555 13 SGSGTMNLGGSLTR Unmodified 1336.6405 0.6405128 1525 P47756 CAPZB F-actin-capping protein subunit beta yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.91 3.42 2 1 8 1 2 1 1 1 1 1 1 1 1 51.223 49.543 2 1.9749E-28 66569 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 157.74 131.07 319260000 33879000 86288000 0 23884000 18038000 17938000 21435000 21534000 0 0 0 0 16535000 23313000 56413000 46663 1525 41849 391364;391365;391366;391367;391368;391369;391370;391371;391372;391373;391374 308562;308563;308564;308565;308566;308567;308568;308569;308570;308571;308572;308573 308567 11 SGSGTMNLGGSLTR Oxidation (M) 1352.6354 0.63542742 1525 P47756 CAPZB F-actin-capping protein subunit beta yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 3 9 1 1 1 1 1 1 1 1 1 1 1 1 35.269 34.176 2 1.2058E-05 38455 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 88.187 68.425 261620000 13802000 38819000 2876100 18229000 14121000 0 17721000 0 0 25403000 29892000 32907000 17524000 17841000 32486000 46664 1525 41849 391375;391376;391377;391378;391379;391380;391381;391382;391383;391384;391385;391386 308574;308575;308576;308577;308578;308579;308580;308581;308582;308583;308584 308583 2425 10 SGSGTMNLGGSLTRQMEK 2 Oxidation (M) 1884.867 0.86696028 1525 P47756 CAPZB F-actin-capping protein subunit beta yes yes 0 2 1 By MS/MS 2 0 1 1 37.813 31.315 3 0.017354 43520 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.437 52.293 73348000 73348000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46665 1525 41850 391387 308585 308585 2425;2426 1 SGSGTMNLGGSLTRQMEK Oxidation (M) 1868.872 0.87204565 1525 P47756 CAPZB F-actin-capping protein subunit beta yes yes 0 1 1 By MS/MS 2 0 2 2 53.758 45.723 3 1.6221E-20 64982 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 119.46 108.99 153890000 153890000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46666 1525 41850 391388;391389 308586;308587 308587 2425;2426 2 SGSGTMNLGGSLTRQMEK Unmodified 1852.8771 0.87713103 1525 P47756 CAPZB F-actin-capping protein subunit beta yes yes 0 0 1 By MS/MS 2 0 2 2 67.982 59.687 2;3 3.717E-80 79898 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 190.27 142.38 154130000 154130000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46667 1525 41850 391390;391391 308588;308589 308589 2 SGSGWSSSRGPYESGSGHSSGLGHR Unmodified 2475.0912 0.091174642 104 CON__Q86YZ3;Q86YZ3 HRNR Hornerin yes no 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 28.612 29.044 4 1.0498E-06 30513 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 34.459 26.467 + 30234000 0 0 0 0 0 0 0 10585000 0 0 0 19649000 0 0 0 46668 104 41851 391392;391393 308590;308591 308591 2 SGSHTVAVMNVGAPAAGMNAAVR 2 Oxidation (M) 2199.0525 0.052469636 861 P08237 PFKM ATP-dependent 6-phosphofructokinase, muscle type yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 43.285 43.53 3 1.9984E-15 48645 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 77.959 69.028 182630000 0 0 0 0 13865000 20756000 20767000 17281000 13201000 0 26117000 28748000 23171000 0 18722000 46669 861 41852 391394;391395;391396;391397;391398;391399;391400;391401;391402;391403 308592;308593;308594;308595;308596;308597;308598;308599;308600;308601;308602;308603 308592 1092;1093 12 SGSHTVAVMNVGAPAAGMNAAVR Unmodified 2167.0626 0.062640392 861 P08237 PFKM ATP-dependent 6-phosphofructokinase, muscle type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 67.259 67.263 3 3.6616E-45 77007 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 111.4 102.74 140320000 0 0 0 4524100 5836200 9539100 9559300 21855000 8131700 20054000 25388000 0 15284000 20145000 0 46670 861 41852 391404;391405;391406;391407;391408;391409;391410;391411;391412;391413 308604;308605;308606;308607;308608;308609;308610;308611;308612;308613 308606 10 SGSHTVAVMNVGAPAAGMNAAVR Oxidation (M) 2183.0576 0.057555014 861 P08237 PFKM ATP-dependent 6-phosphofructokinase, muscle type yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 2 2 1 2 2 1 2 2 1 1 2 2 55.397 55.496 3 4.0972E-29 63177 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 103.4 93.744 306120000 0 0 0 16663000 22422000 10785000 27300000 35138000 6700600 33367000 39203000 29599000 11849000 27702000 45395000 46671 861 41852 391414;391415;391416;391417;391418;391419;391420;391421;391422;391423;391424;391425;391426;391427;391428;391429;391430;391431;391432;391433 308614;308615;308616;308617;308618;308619;308620;308621;308622;308623;308624;308625;308626;308627;308628;308629;308630;308631;308632;308633;308634;308635 308623 1092;1093 14 SGSIGAADSPENWEK Unmodified 1546.69 0.68996541 3842 Q96FZ2 HMCES Embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 51.613 49.807 2 0.00045091 63043 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.848 66.995 73231000 0 63015000 0 0 0 0 0 4495100 0 0 0 0 0 5721000 0 46672 3842 41853 391434;391435;391436 308636;308637;308638 308636 3 SGSLAVDNADPILK Unmodified 1398.7355 0.73545904 1355 P35573 AGL Glycogen debranching enzyme;4-alpha-glucanotransferase;Amylo-alpha-1,6-glucosidase yes yes 0 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 1 3 71.804 65.721 2 2.5769E-23 84547 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.03 109.59 125640000 3479700 122160000 0 0 0 0 0 0 0 0 0 0 0 0 0 46673 1355 41854 391437;391438;391439;391440 308639;308640;308641;308642;308643;308644 308641 6 SGSLDDSFSDFQELPASSK Unmodified 2015.896 0.89599502 5023 Q9UMZ2 SYNRG Synergin gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 2 1 1 79.36 79.339 2 9.5769E-15 91796 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 112.72 104.21 49328000 0 0 0 2902000 4963700 0 5568800 0 0 0 0 0 13748000 9126300 13019000 46674 5023 41855 391441;391442;391443;391444;391445;391446;391447;391448;391449;391450 308645;308646;308647;308648;308649;308650;308651;308652;308653 308645 9 SGSLDSELSVSPK Unmodified 1304.646 0.64597533 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.993 52.14 2 4.5616E-08 58744 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 104.07 75.974 133730000 0 0 0 7302900 6882200 8375100 8737200 9494600 8532900 14455000 14858000 11225000 14826000 12430000 16613000 46675 2193 41856 391451;391452;391453;391454;391455;391456;391457;391458;391459;391460;391461;391462 308654;308655;308656;308657;308658;308659;308660;308661;308662;308663 308656 10 SGSLENVPNVGVNK Unmodified 1412.726 0.72595699 1708 P53004 BLVRA Biliverdin reductase A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52.956 51.878 2 6.1742E-59 65521 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 198.25 173.41 1144200000 23860000 776380000 4332500 10108000 8521100 26924000 15265000 19121000 15633000 22103000 40999000 36939000 18223000 29252000 96550000 46676 1708 41857 391463;391464;391465;391466;391467;391468;391469;391470;391471;391472;391473;391474;391475;391476;391477 308664;308665;308666;308667;308668;308669;308670;308671;308672;308673;308674;308675;308676;308677;308678;308679;308680;308681 308669 18 SGSMATAEASGSDGK Acetyl (Protein N-term);Oxidation (M) 1412.5726 0.57255239 302 O43169 CYB5B Cytochrome b5 type B yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 7 1 1 1 1 1 1 1 14.746 14.96 2 0.00019263 14659 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.286 40.763 19094000 0 0 0 0 0 1659100 2666800 2200100 0 2715900 2417500 4853000 0 2581700 0 46677 302 41858 391478;391479;391480;391481;391482;391483;391484 308682;308683;308684;308685 308682 386 4 SGSMATAEASGSDGK Acetyl (Protein N-term) 1396.5776 0.57763777 302 O43169 CYB5B Cytochrome b5 type B yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.3 28.495 2 2.6755E-113 30348 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 202.16 195.01 105150000 0 0 0 5231500 7526300 6272900 5314300 7750400 5236200 10483000 11879000 13363000 10875000 8298300 12919000 46678 302 41858 391485;391486;391487;391488;391489;391490;391491;391492;391493;391494;391495;391496 308686;308687;308688;308689;308690;308691;308692;308693;308694;308695;308696;308697;308698 308691 13 SGSMDPSGAHPSVR Unmodified 1383.6201 0.62011171 2138 Q07666 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.272 22.476 3 0.00013301 23932 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 68.972 64.799 711340000 0 0 0 35330000 28192000 44269000 43403000 49565000 37774000 72347000 99074000 94385000 52062000 69536000 85402000 46679 2138 41859 391497;391498;391499;391500;391501;391502;391503;391504;391505;391506;391507;391508 308699;308700;308701;308702;308703;308704;308705;308706;308707;308708;308709;308710;308711 308711 9 SGSMDPSGAHPSVR Oxidation (M) 1399.615 0.61502633 2138 Q07666 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 12.979 13.177 3 0.00078648 11802 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.678 71.101 423830000 0 0 0 62257000 0 0 0 49965000 0 73379000 0 84871000 77645000 0 75715000 46680 2138 41859 391509;391510;391511;391512;391513;391514 308712;308713 308712 3441 1 SGSMSAYEMR Unmodified 1117.4532 0.4532293 841 P07384 CAPN1 Calpain-1 catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 33.961 33.748 2 0.0014272 37182 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 91.867 67.912 183560000 0 15421000 0 9363200 7930700 10673000 9787800 13473000 5808500 15487000 18042000 19226000 13864000 13362000 31122000 46681 841 41860 391515;391516;391517;391518;391519;391520;391521;391522;391523;391524;391525;391526;391527 308714;308715;308716;308717;308718;308719;308720;308721;308722;308723;308724;308725;308726;308727;308728;308729 308716 16 SGSMSAYEMR 2 Oxidation (M) 1149.4431 0.44305855 841 P07384 CAPN1 Calpain-1 catalytic subunit yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 9.6109 9.724 2 0.0028255 8505 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 59.35 53.691 30519000 0 0 0 2947500 1518900 1694600 4136200 2318400 1879400 1988200 4424900 3572900 3571900 2466200 0 46682 841 41860 391528;391529;391530;391531;391532;391533;391534;391535;391536;391537;391538 308730;308731;308732;308733;308734;308735 308731 1035;1036 4 SGSMSAYEMR Oxidation (M) 1133.4481 0.44814392 841 P07384 CAPN1 Calpain-1 catalytic subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 20.605 20.817 2 0.01083 20116 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 49.536 45.852 46069000 0 0 0 0 0 5146800 10778000 0 0 5808200 0 0 0 10421000 13915000 46683 841 41860 391539;391540;391541;391542;391543 308736 308736 1035;1036 1 SGSPIVLALPHSQLPQAQK Unmodified 1970.0949 0.094910023 2893 Q6MZP7 LIN54 Protein lin-54 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 78.616 77.991 3 0.0010436 89900 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.326 38.116 114010000 5141500 0 0 7267400 4535800 10198000 7267500 7694200 11044000 11455000 10889000 11818000 0 9708000 16989000 46684 2893 41861 391544;391545;391546;391547;391548;391549;391550;391551;391552;391553;391554;391555 308737;308738;308739;308740;308741;308742;308743;308744;308745;308746 308739 9 SGSRGTERTVVMDK Unmodified 1521.7569 0.75693954 2532 Q15424 SAFB Scaffold attachment factor B1 yes yes 0 0 2 By MS/MS 2 0 2 2 19.028 14.443 2;3 0.0051861 21229 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.753 50.368 135450000 135450000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46685 2532 41862 391556;391557 308747;308748 308748 2 SGSSFVHQASFK Unmodified 1280.6149 0.61494998 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.15 3.37 6 20 2 2 2 1 1 2 1 2 2 2 2 2 1 2 2 37.157 36.251 2;3 1.4588E-09 51457 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 122.55 100.95 422670000 144280000 38913000 13111000 9537100 5274600 21691000 15589000 16842000 14040000 21565000 24503000 28495000 8241300 30069000 30526000 46686 1601 41863 391558;391559;391560;391561;391562;391563;391564;391565;391566;391567;391568;391569;391570;391571;391572;391573;391574;391575;391576;391577;391578;391579;391580;391581;391582;391583 308749;308750;308751;308752;308753;308754;308755;308756;308757;308758;308759;308760;308761;308762;308763 308755 11 SGSSGTPYLGSK Acetyl (Protein N-term) 1181.5564 0.55643205 4218 Q9BX40 LSM14B Protein LSM14 homolog B yes yes 1 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 8.5 3.35 1 5 1 1 1 1 1 1 51.212 52.216 2 0.00039412 45191 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.672 53.124 28306000 3712700 0 0 0 4231200 0 4852800 4693200 0 0 0 0 0 3886400 6929300 46687 4218 41864 391584;391585;391586;391587;391588;391589 308764;308765;308766;308767 308765 4 SGSSSPDSEITELK Unmodified 1435.6678 0.66783299 1061 P17812 CTPS1 CTP synthase 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 47.51 47.76 2 0.0013183 52732 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.367 44.693 40869000 0 0 0 0 2156600 5169000 3397100 0 0 4398700 6628700 6130100 3908500 0 9080100 46688 1061 41865 391590;391591;391592;391593;391594;391595;391596;391597;391598 308768;308769 308768 2 SGSSSSSIPESQSNHSNQSDSGVSDTQPAGHVR Unmodified 3312.4475 0.4475099 3025 Q70E73 RAPH1 Ras-associated and pleckstrin homology domains-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 2 1 1 1 1 1 28.79 29.057 4 1.7241E-19 31383 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 45.836 40.706 113440000 0 0 0 0 0 0 12875000 12242000 0 16526000 16399000 0 0 26303000 29095000 46689 3025 41866 391599;391600;391601;391602;391603;391604;391605 308770;308771;308772;308773;308774;308775 308770 6 SGSSSVAAMK Acetyl (Protein N-term) 965.4488 0.44879585 1947 P63218 GNG5 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 2 1 1 1 1 1 1 27.681 28.174 2 0.002133 30082 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 64.485 48.341 24922000 0 0 0 0 0 0 0 0 0 0 9310900 0 0 5118300 10493000 46690 1947 41867 391606;391607;391608;391609;391610;391611;391612;391613;391614;391615 308776;308777;308778;308779;308780;308781;308782;308783;308784;308785 308780 10 SGSSSVAAMK Acetyl (Protein N-term);Oxidation (M) 981.44371 0.44371047 1947 P63218 GNG5 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5 yes yes 1 1 0 By matching By MS/MS By MS/MS By matching By matching 10 0 5 1 1 1 1 1 12.487 12.768 2 0.0018091 12062 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 51.066 32.284 12836000 0 0 0 0 0 0 0 1976400 0 0 0 3292800 2998000 1860700 2707900 46691 1947 41867 391616;391617;391618;391619;391620 308786;308787 308786 3125 2 SGSTLDGVSRK Unmodified 1105.5728 0.57275081 4215 Q9BWU0 SLC4A1AP Kanadaptin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 15.325 12.072 2 0.026464 15953 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.389 49.114 34587000 6963400 15811000 11812000 0 0 0 0 0 0 0 0 0 0 0 0 46692 4215 41868 391621;391622;391623 308788 308788 1 SGSTLDGVSRKK Unmodified 1233.6677 0.66771383 4215 Q9BWU0 SLC4A1AP Kanadaptin yes yes 0 0 2 By MS/MS 2 0 1 1 12.726 8.7842 3 0.03184 13614 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.343 42.81 21586000 21586000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46693 4215 41869 391624 308789 308789 0 SGSTSISAPTGPSSPLPAPETPTAPAAESAPNGLSTVSHDYLK Unmodified 4147.0233 0.023327387 276 O15357 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 yes yes 0 0 0 By MS/MS 10 0 1 1 82.419 82.622 4 1.6174E-18 95297 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.617 35.676 20470000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20470000 46694 276 41870 391625 308790 308790 1 SGSVDSRVPGGPPASNLRK Unmodified 1879.9864 0.98642221 3432 Q8NEY1 NAV1 Neuron navigator 1 yes yes 0 0 2 By MS/MS By MS/MS 10 0 2 1 1 34.382 34.808 4 0.0056154 38411 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 40.844 30.505 36076000 0 0 0 0 0 0 0 0 10873000 0 0 0 0 0 25203000 46695 3432 41871 391626;391627 308791;308792 308792 0 SGSYFALTDDSK Unmodified 1289.5776 0.57756142 1791 P57081 WDR4 tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 62.093 56.755 2 0.04652 72958 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 45.158 33.994 103370000 0 103370000 0 0 0 0 0 0 0 0 0 0 0 0 0 46696 1791 41872 391628;391629 308793 308793 1 SGSYSYLEER Unmodified 1189.5251 0.52513192 232 O14974 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.239 41.417 2 0.0023779 46189 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 84.213 68.01 120940000 0 0 0 5743600 8809700 5834200 6014100 7642600 7587900 12933000 13913000 18687000 11518000 9217000 13043000 46697 232 41873 391630;391631;391632;391633;391634;391635;391636;391637;391638;391639;391640;391641 308794;308795;308796;308797;308798;308799;308800;308801;308802;308803;308804;308805;308806 308797 12 SGSYSYLEERK Unmodified 1317.6201 0.62009493 232 O14974 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 31.212 31.367 3 0.0433 34347 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 26.969 15.75 16391000 0 0 0 0 0 6946200 0 0 5132200 0 0 0 4312200 0 0 46698 232 41874 391642;391643;391644 308807 308807 1 SGTAETEPVEQDSSQPSLPLVR Unmodified 2326.1288 0.12884851 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 2 2 73.288 73.342 2;3 2.8393E-67 84912 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 124.45 112.83 67121000 0 0 0 0 7793500 8710300 4390400 7546000 0 0 0 0 18813000 19868000 0 46699 2203 41875 391645;391646;391647;391648;391649;391650;391651;391652;391653 308808;308809;308810;308811;308812;308813;308814 308813 7 SGTAETEPVEQDSSQPSLPLVRADDPLRLDQELQQPQTQEK Unmodified 4559.2263 0.2263373 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 0 2 By MS/MS 2 0 1 1 86.889 84.457 4 6.9814E-08 102311 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 37.409 36.245 10470000 0 0 10470000 0 0 0 0 0 0 0 0 0 0 0 0 46700 2203 41876 391654 308815 308815 1 SGTALENPVLLNK Unmodified 1354.7456 0.7456298 644 O95352 ATG7 Ubiquitin-like modifier-activating enzyme ATG7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.24 2 1 10 2 1 1 1 1 1 1 1 1 1 1 1 66.369 65.341 2 0.00069575 74849 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 92.538 75.513 324520000 0 279820000 2403000 2817300 1896100 3956800 0 2912500 0 3475900 4655600 5491300 4838600 3838100 8413600 46701 644 41877 391655;391656;391657;391658;391659;391660;391661;391662;391663;391664;391665;391666;391667 308816;308817;308818;308819;308820;308821;308822;308823;308824 308817 9 SGTDVDAANLR Unmodified 1117.5364 0.53636531 1458 P42574 CASP3 Caspase-3;Caspase-3 subunit p17;Caspase-3 subunit p12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 30.473 30.79 2 0.0074017 32566 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.042 55.204 4636400 0 0 0 0 0 0 0 0 0 0 0 0 0 4636400 0 46702 1458 41878 391668;391669;391670 308825;308826;308827 308825 3 SGTEAVLIAHK Unmodified 1124.619 0.61897272 1636 P50748 KNTC1 Kinetochore-associated protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 32.392 32.804 2 0.024635 35220 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 40.994 30.36 12725000 0 0 0 0 0 0 2247600 0 0 2758400 0 4105500 0 0 3613900 46703 1636 41879 391671;391672;391673;391674 308828 308828 1 SGTEDLRTERLQK Unmodified 1531.7954 0.79543354 3418 Q8NDI1 EHBP1 EH domain-binding protein 1 yes yes 0 0 2 By MS/MS 2 0 1 1 29.717 24.097 3 0.010551 33940 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.091 49.973 16755000 16755000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46704 3418 41880 391675 308829 308829 0 SGTFDLLEMDR Oxidation (M) 1298.5813 0.58126659 4666 Q9NVE7 PANK4 Pantothenate kinase 4 yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 73.531 73.25 2 0.0012753 84290 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 70.028 58.864 40133000 0 0 0 12833000 0 27300000 0 0 0 0 0 0 0 0 0 46705 4666 41881 391676;391677 308830;308831;308832 308830 6081 3 SGTFDLLEMDR Unmodified 1282.5864 0.58635197 4666 Q9NVE7 PANK4 Pantothenate kinase 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 82.17 81.957 2 0.0041646 94974 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 70.977 52.197 29416000 0 0 0 5211100 8023300 16181000 0 0 0 0 0 0 0 0 0 46706 4666 41881 391678;391679;391680 308833;308834;308835 308833 2 SGTGATATVSPK Unmodified 1075.551 0.55095274 3138 Q86TU7 SETD3 Histone-lysine N-methyltransferase setd3 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 14.075 13.413 2 0.013599 13143 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 43.958 25.621 46025000 8440000 10802000 0 0 0 4108400 2128100 0 0 3336600 2774200 0 4142100 4053900 6239900 46707 3138 41882 391681;391682;391683;391684;391685;391686;391687;391688;391689 308836;308837;308838;308839 308836 4 SGTGFGESYSLANPSIR Unmodified 1741.8271 0.8271276 4993 Q9ULG1 INO80 DNA helicase INO80 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 71.31 71.44 2 1.0222E-06 82344 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 82.543 73.814 26164000 0 0 0 0 2183700 0 2648300 0 2698200 3570500 0 3918600 3656100 2960100 4528200 46708 4993 41883 391690;391691;391692;391693;391694;391695;391696;391697 308840;308841;308842;308843;308844;308845;308846 308840 7 SGTGIAAMSVMRPEQIMK Unmodified 1905.9475 0.9474592 1217 P27449 ATP6V0C V-type proton ATPase 16 kDa proteolipid subunit yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 77.086 77.313 3 0.0054713 88880 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.142 24.095 17724000 0 0 0 0 0 0 0 6212600 0 0 0 0 0 0 11511000 46709 1217 41884 391698;391699 308847 308847 1 SGTGIAAMSVMRPEQIMK 3 Oxidation (M) 1953.9322 0.93220307 1217 P27449 ATP6V0C V-type proton ATPase 16 kDa proteolipid subunit yes yes 0 3 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 42.366 42.185 3 0.0002018 47659 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 52.93 46.808 54395000 0 0 0 21965000 14213000 0 0 10784000 7434700 0 0 0 0 0 0 46710 1217 41884 391700;391701;391702;391703 308848 308848 1786;1787;1788 0 SGTHSQSLPDS Unmodified 1114.4891 0.48908076 2304 Q13503 MED21 Mediator of RNA polymerase II transcription subunit 21 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.335 15.506 2 0.00058475 14284 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.438 58.91 45403000 0 0 0 1947300 1766300 1848300 3154600 2558700 1266800 2826200 5915000 4882900 4797800 5278700 9160400 46711 2304 41885 391704;391705;391706;391707;391708;391709;391710;391711;391712;391713;391714;391715 308849;308850;308851;308852;308853;308854;308855;308856;308857;308858 308851 10 SGTIFDNFLITNDEAYAEEFGNETWGVTK Unmodified 3267.4884 0.48841864 1225 P27797 CALR Calreticulin yes yes 0 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 3 1 99.472 93.346 3 1.0948E-154 118115 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 170.55 168.14 742960000 523240000 219720000 0 0 0 0 0 0 0 0 0 0 0 0 0 46712 1225 41886 391716;391717;391718;391719 308859;308860;308861;308862;308863 308863 5 SGTLACTGSLVNNTANDR Unmodified 1849.8588 0.85883843 75 CON__P15636 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 2 1 1 1 1 1 1 50.291 50.445 2;3 0 56333 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 309.17 268.68 + 951350000 0 0 0 52536000 45480000 73627000 50969000 45405000 91356000 62577000 196560000 119650000 55797000 70047000 87349000 46713 75 41887 391720;391721;391722;391723;391724;391725;391726;391727;391728;391729;391730;391731;391732 308864;308865;308866;308867;308868;308869;308870;308871;308872;308873;308874;308875;308876;308877;308878;308879;308880;308881;308882;308883 308880 20 SGTLACTGSLVNNTANDRK Unmodified 1977.9538 0.95380145 75 CON__P15636 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.61 2.99 8 2 46 4 4 2 2 5 4 4 3 5 5 5 5 3 2 3 43.993 43.412 2;3 0 47652 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 260.19 251.89 + 108480000000 2878200000 1617500000 1926200000 7141600000 5802500000 8806700000 5908900000 5882400000 11099000000 8184600000 13712000000 12399000000 8372400000 6827600000 7926300000 46714 75 41888 391733;391734;391735;391736;391737;391738;391739;391740;391741;391742;391743;391744;391745;391746;391747;391748;391749;391750;391751;391752;391753;391754;391755;391756;391757;391758;391759;391760;391761;391762;391763;391764;391765;391766;391767;391768;391769;391770;391771;391772;391773;391774;391775;391776;391777;391778;391779;391780;391781;391782;391783;391784;391785;391786;391787;391788 308884;308885;308886;308887;308888;308889;308890;308891;308892;308893;308894;308895;308896;308897;308898;308899;308900;308901;308902;308903;308904;308905;308906;308907;308908;308909;308910;308911;308912;308913;308914;308915;308916;308917;308918;308919;308920;308921;308922;308923;308924;308925;308926;308927;308928;308929;308930;308931;308932;308933;308934;308935;308936;308937;308938;308939;308940;308941;308942;308943;308944;308945;308946;308947;308948;308949;308950 308891 64 SGTMNSYEMRK Unmodified 1302.5697 0.56965604 1057 P17655 CAPN2 Calpain-2 catalytic subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 1 1 2 1 1 1 2 19.865 20.119 2;3 0.022212 20365 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 32.159 19.996 75989000 0 0 0 4465100 2717600 5224000 2904500 4021300 2346200 7977400 12293000 6145100 5649900 5544700 16700000 46715 1057 41889 391789;391790;391791;391792;391793;391794;391795;391796;391797;391798;391799;391800;391801;391802 308951;308952;308953 308953 1 SGTNEDDLTMK Unmodified 1209.5183 0.51833198 217 O14802 POLR3A DNA-directed RNA polymerase III subunit RPC1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 27.025 26.996 2 0.013959 27743 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 46.033 29.83 5130800 0 0 0 0 2349000 0 0 0 0 0 0 0 0 2781800 0 46716 217 41890 391803;391804 308954 308954 1 SGTNLDGNDEFDEQLR Acetyl (Protein N-term) 1850.7919 0.7918643 360 O43719 HTATSF1 HIV Tat-specific factor 1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.542 71.608 2 1.3968E-98 82267 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 195.25 185.82 258700000 0 0 0 14229000 11378000 13375000 14292000 11772000 8622800 21665000 34052000 30625000 25537000 32635000 40518000 46717 360 41891 391805;391806;391807;391808;391809;391810;391811;391812;391813;391814;391815;391816 308955;308956;308957;308958;308959;308960;308961;308962;308963;308964;308965;308966 308961 12 SGTNLDGNDEFDEQLRMQELYGDGK Acetyl (Protein N-term) 2872.2457 0.24574553 360 O43719 HTATSF1 HIV Tat-specific factor 1 yes yes 1 0 1 By MS/MS 2.5 0.5 1 1 2 84.282 80.285 3 2.2052E-179 99499 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 187.79 171.7 171280000 0 171280000 0 0 0 0 0 0 0 0 0 0 0 0 0 46718 360 41892 391817;391818 308967;308968;308969 308968 3 SGTNLDGNDEFDEQLRMQELYGDGK Acetyl (Protein N-term);Oxidation (M) 2888.2407 0.24066015 360 O43719 HTATSF1 HIV Tat-specific factor 1 yes yes 1 1 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.6 2.8 1 4 1 1 1 1 1 77.912 77.352 3 1.6687E-10 89511 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.881 54.852 54158000 0 12226000 0 0 0 6705000 0 0 0 0 0 13638000 0 9021000 12568000 46719 360 41892 391819;391820;391821;391822;391823 308970;308971;308972;308973 308970 461 4 SGTPTQDEMMDKPTSSSVDTMSLLSK 3 Oxidation (M) 2820.2351 0.23510577 2810 Q5VT52 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 0 3 1 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 53.072 52.966 3 8.4786E-07 59658 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 42.106 41.745 68844000 0 0 0 9462100 13338000 0 21597000 0 0 0 0 24447000 0 0 0 46720 2810 41893 391824;391825;391826;391827 308974 308974 4445;4446;4447 1 SGTPTQDEMMDKPTSSSVDTMSLLSK 2 Oxidation (M) 2804.2402 0.24019115 2810 Q5VT52 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 0 2 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 64.755 64.766 3 1.8836E-10 74067 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 54.441 52.158 21924000 0 0 0 3803100 0 0 5636000 0 0 0 0 6844400 5640000 0 0 46721 2810 41893 391828;391829;391830;391831 308975;308976 308976 4445;4446;4447 2 SGTQDIQPGPLFNNNADGVATDITSTR Unmodified 2788.3264 0.32637912 3073 Q7Z2W4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 81.783 81.871 3 1.2104E-118 94987 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 123.71 117.55 104370000 0 0 0 0 13852000 0 10282000 15260000 17576000 20303000 0 22633000 4466800 0 0 46722 3073 41894 391832;391833;391834;391835;391836;391837;391838 308977;308978;308979 308979 3 SGTQSTITDRFPLK Acetyl (Protein N-term) 1591.8206 0.82058566 4778 Q9NZN5 ARHGEF12 Rho guanine nucleotide exchange factor 12 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 72.626 72.634 2 1.0587E-13 83386 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 124.1 100.5 61008000 0 0 0 4038800 4090400 13141000 5856500 5375400 5187600 0 0 9188700 6299800 7829600 0 46723 4778 41895 391839;391840;391841;391842;391843;391844;391845;391846;391847 308980;308981;308982;308983;308984;308985;308986;308987;308988 308981 8 SGTSEFLNK Unmodified 981.47673 0.47672516 1002 P14625 HSP90B1 Endoplasmin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 31.929 30.882 2 1.5644E-06 32820 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 157.58 136.03 4818500000 166000000 2410900000 89010000 132760000 111490000 239140000 137290000 90865000 106520000 196830000 233510000 191870000 191590000 178020000 342750000 46724 1002 41896 391848;391849;391850;391851;391852;391853;391854;391855;391856;391857;391858;391859;391860;391861;391862;391863 308989;308990;308991;308992;308993;308994;308995;308996;308997;308998;308999;309000;309001;309002;309003;309004;309005;309006;309007;309008;309009;309010;309011;309012;309013;309014;309015 308996 26 SGTSSPQSPVFR Unmodified 1248.6099 0.6098646 3339 Q8N556 AFAP1 Actin filament-associated protein 1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 36.879 37.062 2 0.00083371 40782 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 86.624 78.092 114040000 0 0 0 7454500 8532400 7776700 7823300 8021400 5856400 0 13097000 15442000 13773000 10812000 15451000 46725 3339 41897 391864;391865;391866;391867;391868;391869;391870;391871;391872;391873;391874 309016;309017;309018;309019 309019 4 SGTTAPLGFDEMEVEIQTVK Unmodified 2151.0406 0.040550771 4641 Q9NU22 MDN1 Midasin yes yes 0 0 0 By MS/MS 2 0 1 1 93.179 88.269 2 4.9115E-08 109589 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.41 89.383 15657000 0 15657000 0 0 0 0 0 0 0 0 0 0 0 0 0 46726 4641 41898 391875 309020 309020 1 SGTTIALK Unmodified 789.45962 0.45961853 417 O60610 DIAPH1 Protein diaphanous homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29.402 28.638 2 0.01816 36928 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.142 44.45 658910000 12817000 298120000 8574200 24719000 19491000 35625000 24647000 21463000 12425000 37031000 29248000 38907000 29789000 26641000 39418000 46727 417 41899 391876;391877;391878;391879;391880;391881;391882;391883;391884;391885;391886;391887;391888;391889;391890 309021;309022;309023;309024;309025;309026;309027 309023 7 SGTTSESGALSLEPSHIGDLQK Unmodified 2213.0812 0.081170032 3091 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 3 1 1 1 1 1 1 1 1 1 1 1 1 70.306 69.446 3 4.4013E-11 79952 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 71.148 50.334 268240000 0 96320000 0 8051600 9356200 12025000 12058000 12587000 10492000 16835000 16716000 21456000 13958000 15992000 22398000 46728 3091 41900 391891;391892;391893;391894;391895;391896;391897;391898;391899;391900;391901;391902;391903;391904;391905 309028;309029;309030;309031;309032;309033;309034;309035;309036;309037;309038;309039;309040;309041;309042;309043;309044 309044 17 SGTVDPQELQK Unmodified 1200.5986 0.59863121 1287 P30626 SRI Sorcin yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.992 32.179 2 0.0003222 35043 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 112.8 97.187 249660000 0 0 0 10000000 13008000 17257000 16165000 13353000 12064000 22968000 28652000 28013000 15154000 22972000 50048000 46729 1287 41901 391906;391907;391908;391909;391910;391911;391912;391913;391914;391915;391916;391917 309045;309046;309047;309048;309049;309050;309051;309052;309053 309047 9 SGTYLQGTFR Unmodified 1128.5564 0.55637247 5110 Q9Y2L1 DIS3 Exosome complex exonuclease RRP44 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 49.528 49.78 2 0.0039934 56155 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 74.464 57.688 52809000 0 0 0 0 0 12370000 11422000 0 0 8404100 0 0 0 0 20613000 46730 5110 41902 391918;391919;391920;391921;391922;391923;391924 309054;309055;309056;309057;309058;309059;309060;309061;309062 309057 8 SGVAEAPVGSK Unmodified 1000.5189 0.51892433 4326 Q9H0E9 BRD8 Bromodomain-containing protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.916 20.117 2 0.00027424 20505 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 92.538 37.927 229490000 0 0 0 12930000 13328000 16642000 16695000 16170000 13405000 22897000 27321000 27716000 22629000 17488000 22274000 46731 4326 41903 391925;391926;391927;391928;391929;391930;391931;391932;391933;391934;391935;391936 309063;309064;309065;309066;309067;309068;309069;309070;309071;309072;309073;309074 309068 8 SGVAITFLTK Unmodified 1035.5964 0.59644637 4168 Q9BUQ8 DDX23 Probable ATP-dependent RNA helicase DDX23 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.5 3.01 1 1 8 1 1 1 1 1 1 1 1 1 1 77.721 76.692 2 0.002199 98391 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.15 85.023 172160000 73521000 9038200 0 0 0 7108900 0 0 7698500 11545000 14798000 15938000 6402600 8447300 17662000 46732 4168 41904 391937;391938;391939;391940;391941;391942;391943;391944;391945;391946 309075;309076;309077;309078;309079;309080;309081;309082;309083;309084 309082 10 SGVDQMDLFGDMSTPPDLNSPTESK 2 Oxidation (M) 2699.1578 0.15784173 2021 P98082 DAB2 Disabled homolog 2 yes yes 0 2 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS 10 0 15 2 1 2 1 2 1 2 1 1 2 76.245 76.296 2;3 4.4238E-24 87852 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.14 79.671 205970000 0 0 0 17632000 2417000 0 37346000 0 21265000 37348000 6210900 31644000 4951300 4556600 42599000 46733 2021 41905 391947;391948;391949;391950;391951;391952;391953;391954;391955;391956;391957;391958;391959;391960;391961 309085;309086;309087;309088;309089 309087 3277;3278 5 SGVDQMDLFGDMSTPPDLNSPTESK Oxidation (M) 2683.1629 0.16292711 2021 P98082 DAB2 Disabled homolog 2 yes yes 0 1 0 By MS/MS 2 0 1 1 85.505 80.731 3 1.2088E-05 100364 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.621 50.772 51961000 0 51961000 0 0 0 0 0 0 0 0 0 0 0 0 0 46734 2021 41905 391962 309090 309090 3277;3278 1 SGVDQMDLFGDMSTPPDLNSPTESK Unmodified 2667.168 0.16801248 2021 P98082 DAB2 Disabled homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 6.8 3.92 2 3 2 1 1 1 89.485 87.614 2;3 1.1168E-97 107996 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 147.92 127.33 232750000 0 206870000 0 0 0 0 0 0 0 4696900 2345100 0 0 0 18837000 46735 2021 41905 391963;391964;391965;391966;391967 309091;309092;309093 309092 2 SGVFNVSELVR Unmodified 1205.6404 0.64043645 174 O00712 NFIB Nuclear factor 1 B-type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.68 81.731 2 1.1363E-05 94083 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 138.08 99.304 538630000 0 0 0 12436000 17174000 30813000 32411000 0 41235000 71543000 61836000 50404000 32676000 67523000 120580000 46736 174 41906 391968;391969;391970;391971;391972;391973;391974;391975;391976;391977;391978;391979 309094;309095;309096;309097;309098;309099;309100;309101;309102;309103;309104;309105;309106 309097 13 SGVGNIFIK Unmodified 933.52837 0.5283668 958 P11940;Q4VXU2;Q96DU9 PABPC1;PABPC1L;PABPC5 Polyadenylate-binding protein 1;Polyadenylate-binding protein 1-like;Polyadenylate-binding protein 5 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64.466 63.871 2 0.0033925 73781 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 105.14 17.813 2706500000 0 913290000 197900000 96423000 89246000 131740000 107420000 98828000 104150000 146640000 160590000 167950000 149780000 156350000 186140000 46737 958 41907 391980;391981;391982;391983;391984;391985;391986;391987;391988;391989;391990;391991;391992;391993;391994 309107;309108;309109;309110;309111;309112;309113;309114;309115;309116;309117;309118;309119;309120;309121 309120 15 SGVGNVFIK Unmodified 919.51272 0.51271674 2268 Q13310 PABPC4 Polyadenylate-binding protein 4 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.78 3.58 5 13 2 2 1 1 1 1 2 1 1 1 1 1 1 1 1 55.435 53.751 1;2 0.0030483 59459 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 103.42 42.942 4182600000 432150000 540900000 52664000 48277000 48339000 206320000 302250000 65465000 198190000 338550000 384500000 440500000 404080000 315690000 404710000 46738 2268 41908 391995;391996;391997;391998;391999;392000;392001;392002;392003;392004;392005;392006;392007;392008;392009;392010;392011;392012 309122;309123;309124;309125;309126;309127;309128;309129;309130;309131;309132;309133;309134;309135;309136;309137;309138;309139;309140;309141;309142;309143;309144 309136 23 SGVGTALLLK Unmodified 957.58588 0.58588168 762 P02786 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67.445 66.39 2 0.0020595 74544 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 86.67 38.927 426350000 105920000 79410000 15067000 12028000 17283000 19069000 16361000 16856000 12719000 18297000 18778000 27285000 19020000 20521000 27732000 46739 762 41909 392013;392014;392015;392016;392017;392018;392019;392020;392021;392022;392023;392024;392025;392026;392027 309145;309146;309147;309148;309149;309150;309151;309152 309150 7 SGVIQDALK Unmodified 929.5182 0.51819605 3151 Q86UP2 KTN1 Kinectin yes yes 0 0 0 By MS/MS 3 0 1 1 50.641 45.744 2 0.034128 56825 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 64.265 5.2834 1465700 0 1465700 0 0 0 0 0 0 0 0 0 0 0 0 0 46740 3151 41910 392028 309153 309153 1 SGVISGGASDLK Unmodified 1089.5666 0.5666028 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 36.646 35.418 2 0.00018736 39006 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 84.658 35.24 727560000 13200000 385200000 4118800 18748000 18703000 31919000 32932000 23568000 18374000 37312000 36188000 44653000 31985000 30657000 0 46741 2431 41911 392029;392030;392031;392032;392033;392034;392035;392036;392037;392038;392039;392040;392041;392042;392043;392044 309154;309155;309156;309157;309158;309159;309160;309161;309162;309163;309164;309165;309166;309167;309168 309155 15 SGVLDESTIATILR Unmodified 1473.8039 0.80387296 684 O95747 OXSR1 Serine/threonine-protein kinase OSR1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 89.272 89.397 2 2.4952E-13 103548 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 133.07 98.182 17509000 0 0 0 0 0 3418500 0 0 0 0 2468500 0 0 2075300 9547100 46742 684 41912 392045;392046;392047;392048;392049;392050;392051 309169;309170;309171;309172;309173;309174;309175 309171 7 SGVLDTLTK Unmodified 932.51786 0.51786169 4005 Q99417 MYCBP C-Myc-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 56.827 55.166 2 0.0032581 61557 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 90.64 62.218 1217400000 25870000 715180000 13733000 27796000 31489000 46615000 0 0 33312000 0 71936000 74542000 47478000 45286000 84159000 46743 4005 41913 392052;392053;392054;392055;392056;392057;392058;392059;392060;392061;392062;392063;392064;392065;392066 309176;309177;309178;309179;309180;309181;309182;309183;309184;309185;309186;309187;309188;309189;309190;309191;309192;309193;309194;309195;309196 309192 20 SGVNSELVK Unmodified 931.49746 0.4974606 1365 P35659 DEK Protein DEK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 26.894 26.901 2 0.0031256 28763 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 91.069 42.313 452300000 0 0 0 67798000 63301000 90316000 59952000 60322000 57400000 0 0 0 0 53211000 0 46744 1365 41914 392067;392068;392069;392070;392071;392072;392073 309197;309198;309199;309200;309201;309202 309198 4 SGVPVLAVSLALEGK Unmodified 1438.8395 0.83953018 2696 Q53EL6 PDCD4 Programmed cell death protein 4 yes yes 0 0 0 By MS/MS 2 0 1 1 97.35 89.22 2 0.0020771 115103 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.469 71.28 489340000 489340000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46745 2696 41915 392074 309203 309203 1 SGVQVFQQSSR Unmodified 1221.6102 0.61019895 3295 Q8IZH2 XRN1 5'-3' exoribonuclease 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 37.696 38.008 2 2.4429E-05 42056 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 121.6 47.476 126080000 0 0 0 0 0 11878000 10296000 17021000 8570900 11352000 11991000 10437000 16825000 16807000 10903000 46746 3295 41916 392075;392076;392077;392078;392079;392080;392081;392082;392083;392084 309204;309205;309206;309207;309208;309209;309210;309211;309212 309211 8 SGVSITIDDPVR Unmodified 1257.6565 0.65648044 4976 Q9UKV3 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 69.049 69.164 2 0.024991 79491 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 63.283 33.81 2881100 0 0 0 0 0 0 0 0 0 2881100 0 0 0 0 0 46747 4976 41917 392085;392086 309213;309214 309214 2 SGVSLAALK Unmodified 844.50182 0.5018177 1038;920 P10412;P16402;P16403 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 53.637 53.778 2 0.0030604 61904 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 91.853 38.299 450740000 0 0 0 23337000 28036000 28727000 21623000 20581000 22762000 43291000 55717000 52592000 49427000 38565000 66083000 46748 920;1038 41918 392087;392088;392089;392090;392091;392092;392093;392094;392095;392096;392097;392098 309215;309216;309217;309218;309219;309220;309221;309222;309223;309224;309225;309226;309227;309228;309229 309229 15 SGVVLLNPIPK Unmodified 1135.6965 0.69649476 1040 P16591 FER Tyrosine-protein kinase Fer yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 78.045 76.92 2 0.00060083 88729 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 79.906 47.972 117670000 25588000 39141000 1602000 2334400 2481700 4126700 4120100 3202800 2537500 4281400 4967200 5736000 3662500 4381300 9511800 46749 1040 41919 392099;392100;392101;392102;392103;392104;392105;392106;392107;392108;392109;392110;392111;392112;392113;392114 309230;309231;309232;309233;309234;309235;309236;309237;309238;309239;309240;309241;309242;309243;309244;309245 309232 16 SGVWLVAPLIAK Unmodified 1252.7543 0.75434399 3709 Q93074 MED12 Mediator of RNA polymerase II transcription subunit 12 yes yes 0 0 0 By MS/MS 10 0 1 1 91.465 91.602 2 0.035206 106041 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.944 31.493 1171100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1171100 46750 3709 41920 392115 309246 309246 1 SGWESYYK Acetyl (Protein N-term) 1060.4502 0.45017606 973 P12956 XRCC6 X-ray repair cross-complementing protein 6 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.88 3.69 1 1 6 1 1 1 1 1 1 1 1 73.603 73.712 2 0.0073802 89819 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 75.109 67.889 169790000 110250000 32751000 0 0 0 0 3752500 3091500 0 0 5495500 6017700 3760900 4667100 0 46751 973 41921 392116;392117;392118;392119;392120;392121;392122;392123 309247;309248;309249;309250;309251 309249 5 SGYAIQADEEQLR Unmodified 1478.7001 0.70013617 3081 Q7Z3B4 NUP54 Nucleoporin p54 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 52.45 52.587 2 4.1996E-08 58922 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 104.79 89.651 128800000 0 0 0 8289900 9797300 8698100 12743000 0 0 0 18329000 14995000 17297000 18849000 19800000 46752 3081 41922 392124;392125;392126;392127;392128;392129;392130;392131;392132;392133 309252;309253;309254;309255;309256;309257;309258;309259;309260;309261;309262 309260 10 SGYGFNEPEQSR Unmodified 1369.5899 0.58985744 2721 Q5BKZ1 ZNF326 DBIRD complex subunit ZNF326 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.989 38.169 2 0.0059635 41828 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.82 52.773 136200000 0 0 0 6221700 7745900 7488900 7254500 9010000 5929300 10460000 14909000 17841000 17727000 13375000 18242000 46753 2721 41923 392134;392135;392136;392137;392138;392139;392140;392141;392142;392143;392144;392145 309263;309264;309265 309265 3 SGYHQSASEHGLVVIAPDTSPR Unmodified 2307.1244 0.12437225 929 P10768 ESD S-formylglutathione hydrolase yes yes 0 0 0 By MS/MS By MS/MS 4.25 3.34 2 1 1 3 1 62.65 57.368 3;4 9.1966E-16 78134 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.733 64.777 67978000 55418000 0 0 0 0 0 0 0 0 0 0 0 0 0 12560000 46754 929 41924 392146;392147;392148;392149 309266;309267;309268;309269;309270 309270 5 SGYHQSASEHGLVVIAPDTSPRGCNIK Unmodified 2879.3984 0.39843862 929 P10768 ESD S-formylglutathione hydrolase yes yes 0 0 1 By MS/MS 2 0 1 1 66.69 58.396 5 0.00058877 78221 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 32.434 23.347 16948000 16948000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46755 929 41925 392150 309271;309272 309272 2 SGYIESVQHILK Unmodified 1372.7351 0.73506511 4101 Q9BQP7 MGME1 Mitochondrial genome maintenance exonuclease 1 yes yes 0 0 0 By MS/MS 2 0 1 1 79.465 71.335 3 0.014414 93761 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 34.768 17.826 8136700 8136700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46756 4101 41926 392151 309273 309273 1 SGYIPSGPITTIHENEVVK Unmodified 2040.0528 0.052770437 2866 Q6AWC2 WWC2 Protein WWC2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 2 1 1 1 1 77.815 73.025 3 3.2812E-06 89903 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 74.519 65.235 56471000 32078000 4300600 20092000 0 0 0 0 0 0 0 0 0 0 0 0 46757 2866 41927 392152;392153;392154 309274;309275;309276;309277 309277 4 SGYLAGDK Unmodified 809.39193 0.3919329 1198 P26038 MSN Moesin yes yes 0 0 0 By MS/MS 3 0 1 1 17.848 14.19 2 0.025965 17681 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 79.713 26.191 62568000 0 62568000 0 0 0 0 0 0 0 0 0 0 0 0 0 46758 1198 41928 392155 309278;309279 309278 2 SGYLLPDTK Unmodified 992.51786 0.51786169 1002 P14625 HSP90B1 Endoplasmin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.948 50.103 2 0.0032179 56225 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 92.838 67.944 890310000 0 0 0 40448000 36898000 71058000 54160000 61103000 22156000 71236000 95711000 66023000 74587000 82072000 214860000 46759 1002 41929 392156;392157;392158;392159;392160;392161;392162;392163;392164;392165;392166;392167 309280;309281;309282;309283;309284;309285;309286;309287;309288;309289;309290;309291;309292;309293;309294;309295 309287 16 SGYLSSER Unmodified 897.41921 0.41921028 1017 P15311 EZR Ezrin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.631 18.828 2 0.042547 19041 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 49.57 36.017 177180000 0 0 0 9804900 5797900 5193900 6205700 6240900 4232100 8581600 21115000 22749000 7284000 14540000 65435000 46760 1017 41930 392168;392169;392170;392171;392172;392173;392174;392175;392176;392177;392178;392179 309296 309296 1 SGYQDMPEYENFR Unmodified 1634.6671 0.66712148 2536 Q15436 SEC23A Protein transport protein Sec23A yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 64.571 64.833 2 0.041412 73497 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 31.597 27.58 16716000 0 0 0 0 0 2801700 0 0 0 0 2882100 0 0 3719100 7313300 46761 2536 41931 392180;392181;392182;392183 309297 309297 1 SGYRIDFYFDENPYFENK Unmodified 2303.0171 0.017113212 2049;906 P0DME0;Q01105 SETSIP;SET Protein SETSIP;Protein SET no no 0 0 1 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 2 2 1 91.692 86.324 2;3 2.4124E-33 109751 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 135.09 131.54 807580000 715530000 86138000 5916500 0 0 0 0 0 0 0 0 0 0 0 0 46762 906;2049 41932 392184;392185;392186;392187;392188 309298;309299;309300;309301 309301 3 SGYSEVNLSK Unmodified 1082.5244 0.52440364 895 P09884 POLA1 DNA polymerase alpha catalytic subunit yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 34.303 34.542 2 0.0017238 36949 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.08 72.409 162080000 0 0 0 0 6623400 16177000 9801700 8988300 9570700 15861000 24140000 14244000 13704000 15643000 27324000 46763 895 41933 392189;392190;392191;392192;392193;392194;392195;392196;392197;392198;392199 309302;309303;309304;309305;309306 309304 4 SGYSSDRDR Acetyl (Protein N-term) 1083.4581 0.45811498 1062 P17844 DDX5 Probable ATP-dependent RNA helicase DDX5 yes yes 1 0 1 By MS/MS 10 0 1 1 8.0801 8.4391 2 0.010379 6473 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 65.246 48.47 19019000 0 0 0 0 0 0 0 0 0 0 19019000 0 0 0 0 46764 1062 41934 392200 309307 309307 1 SHAEIAEQAK Unmodified 1082.5356 0.53563702 3006 Q6ZRS2 SRCAP Helicase SRCAP yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 10.529 7.7677 2 8.8475E-06 10775 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.66 105.73 20544000 0 16820000 3724500 0 0 0 0 0 0 0 0 0 0 0 0 46765 3006 41935 392201;392202 309308;309309 309308 2 SHAFSHV Unmodified 783.36639 0.36638685 4585 Q9NR12 PDLIM7 PDZ and LIM domain protein 7 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 17.569 13.669 2 0.024111 18367 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.28 84.619 202590000 181820000 20772000 0 0 0 0 0 0 0 0 0 0 0 0 0 46766 4585 41936 392203;392204 309310;309311;309312 309311 3 SHAVLLVK Unmodified 865.53854 0.53853756 2449 Q14807 KIF22 Kinesin-like protein KIF22 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.057 31.243 2 0.010604 32847 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 79.116 40.324 130220000 0 0 0 2709600 4358100 11538000 6570400 8865600 5897800 12305000 11797000 18569000 10063000 11113000 26436000 46767 2449 41937 392205;392206;392207;392208;392209;392210;392211;392212;392213;392214;392215;392216 309313;309314 309314 2 SHAVTMFEVGK Oxidation (M) 1220.586 0.58595803 2841 Q658Y4 FAM91A1 Protein FAM91A1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 4 1 1 2 41.044 36.298 3 0.0016495 45726 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 71.03 59.437 68680000 48687000 8309000 11684000 0 0 0 0 0 0 0 0 0 0 0 0 46768 2841 41938 392217;392218;392219;392220 309315;309316 309316 4505 2 SHAVTMFEVGK Unmodified 1204.591 0.59104341 2841 Q658Y4 FAM91A1 Protein FAM91A1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 57.586 51.516 2;3 0.0026944 70779 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.359 50.87 35985000 31891000 0 4094000 0 0 0 0 0 0 0 0 0 0 0 0 46769 2841 41938 392221;392222 309317;309318;309319 309318 2 SHCIAEVEK Unmodified 1071.5019 0.50189405 65 CON__P02769 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 16.644 15.848 2 5.2547E-20 14635 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 172.23 137.42 + 601930000 7472200 64556000 42324000 26110000 43228000 16308000 22799000 19211000 17720000 57452000 85162000 62644000 49078000 39317000 48552000 46770 65 41939 392223;392224;392225;392226;392227;392228;392229;392230;392231;392232;392233;392234;392235;392236;392237;392238 309320;309321;309322;309323;309324;309325;309326;309327;309328;309329;309330;309331;309332;309333;309334;309335;309336;309337;309338;309339 309329 19 SHCIAEVENDEMPADLPSLAADFVESK Oxidation (M) 2989.3321 0.3321177 64 CON__P02768-1;P02768 ALB Serum albumin yes no 0 1 0 By MS/MS 10 0 1 1 89.594 89.253 3 7.1417E-08 103828 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 40.756 39.952 + 2133600 0 0 0 2133600 0 0 0 0 0 0 0 0 0 0 0 46771 64 41940 392239 309340 309340 72 1 SHDAIIDDLNRK Unmodified 1395.7106 0.71064128 4264 Q9BZF9 UACA Uveal autoantigen with coiled-coil domains and ankyrin repeats yes yes 0 0 1 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 40.326 40.677 3 0.0007516 44063 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.401 54.114 43486000 0 0 0 0 0 6745900 0 0 3888600 5086300 0 9117800 5373200 5218300 8056200 46772 4264 41941 392240;392241;392242;392243;392244;392245;392246 309341;309342;309343 309341 3 SHDDGNIDLESDSFLK Unmodified 1790.7959 0.79588705 1074 P18583 SON Protein SON yes yes 0 0 0 By MS/MS 3 0 1 1 74.867 71.195 3 0.030489 85901 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 35.757 26.475 2805500 0 2805500 0 0 0 0 0 0 0 0 0 0 0 0 0 46773 1074 41942 392247 309344 309344 0 SHDQAVRTYQEHK Unmodified 1597.7597 0.75971673 896 P09960 LTA4H Leukotriene A-4 hydrolase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 6 2 2 2 10.828 7.6967 3;4 2.1619E-08 11788 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.46 82.258 717060000 676340000 26432000 14297000 0 0 0 0 0 0 0 0 0 0 0 0 46774 896 41943 392248;392249;392250;392251;392252;392253 309345;309346;309347 309346 2 SHDTTSNTLAQLLAK Unmodified 1598.8264 0.82639932 3715 Q969G5 PRKCDBP Protein kinase C delta-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 74.333 74.449 3 0.00083952 85710 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 54.95 46.566 120280000 0 0 0 0 5520200 5965500 7224600 13203000 7837300 13117000 11563000 12506000 11535000 10074000 21732000 46775 3715 41944 392254;392255;392256;392257;392258;392259;392260;392261;392262;392263;392264 309348;309349;309350;309351;309352 309348 4 SHDVQEVLK Unmodified 1053.5455 0.54547343 4822 Q9P2N5 RBM27 RNA-binding protein 27 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 30.62 26.817 2 0.0082354 35442 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.696 50.674 36291000 0 29167000 7124100 0 0 0 0 0 0 0 0 0 0 0 0 46776 4822 41945 392265;392266 309353;309354 309353 2 SHEAEVLK Unmodified 911.47125 0.47124585 1043 P16949 STMN1 Stathmin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.18 3.29 3 1 13 1 2 1 1 1 1 1 1 2 1 1 1 3 11.535 10.928 2 0.00028872 13695 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 161.11 100.32 7213900000 776800000 3751700000 2444900000 0 3460000 2706400 9420800 4945500 3156300 0 30927000 45281000 5094500 41124000 94382000 46777 1043 41946 392267;392268;392269;392270;392271;392272;392273;392274;392275;392276;392277;392278;392279;392280;392281;392282;392283 309355;309356;309357;309358;309359;309360;309361;309362;309363;309364;309365;309366;309367;309368;309369;309370;309371;309372 309368 16 SHEEVNTELK Unmodified 1184.5673 0.56733108 4982 Q9UL03 INTS6 Integrator complex subunit 6 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 17.218 17.398 2 0.00093245 15977 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 112.36 73.566 37085000 0 0 0 1703400 1574900 2386600 2584700 1878200 1940500 2713300 3372500 4427800 4697900 3656200 6149100 46778 4982 41947 392284;392285;392286;392287;392288;392289;392290;392291;392292;392293;392294;392295 309373;309374;309375 309375 3 SHEGETAYIR Unmodified 1161.5415 0.54145068 2145 Q07955 SRSF1 Serine/arginine-rich splicing factor 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 1 1 2 2 1 2 2 2 2 2 2 19.114 19.363 2;3 0.0064671 19328 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 76.064 47.89 111000000 0 0 0 5319400 4789300 2823800 6166300 6607100 2552000 8864300 14011000 15560000 10465000 9446400 24401000 46779 2145 41948 392296;392297;392298;392299;392300;392301;392302;392303;392304;392305;392306;392307;392308;392309;392310;392311;392312;392313;392314;392315 309376;309377;309378;309379;309380 309377 3 SHENCNQNMHEPFPMSK Oxidation (M) 2101.8404 0.84042795 2250 Q13188 STK3 Serine/threonine-protein kinase 3;Serine/threonine-protein kinase 3 36kDa subunit;Serine/threonine-protein kinase 3 20kDa subunit yes yes 0 1 0 By MS/MS By MS/MS 2 0 3 2 1 35.672 30.251 3 0.0013726 44361 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.888 46.308 25047000 22155000 0 2891400 0 0 0 0 0 0 0 0 0 0 0 0 46780 2250 41949 392316;392317;392318 309381;309382;309383 309383 3656;3657 3 SHENCNQNMHEPFPMSK Unmodified 2085.8455 0.84551333 2250 Q13188 STK3 Serine/threonine-protein kinase 3;Serine/threonine-protein kinase 3 36kDa subunit;Serine/threonine-protein kinase 3 20kDa subunit yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 46.613 40.814 3 0.023732 57343 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 28.549 26.285 20195000 17827000 0 2368700 0 0 0 0 0 0 0 0 0 0 0 0 46781 2250 41949 392319;392320 309384 309384 1 SHEQLSALK Unmodified 1011.5349 0.53490874 4399 Q9H4I2 ZHX3 Zinc fingers and homeoboxes protein 3 yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 1 2 24.179 20.511 2 1.1543E-06 26704 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 163.16 86.102 28344000 19002000 0 9341600 0 0 0 0 0 0 0 0 0 0 0 0 46782 4399 41950 392321;392322;392323 309385;309386;309387 309387 3 SHEQVLEEMLEAGLDPSQRPK Unmodified 2392.1693 0.16927353 3559 Q8WVB6 CHTF18 Chromosome transmission fidelity protein 18 homolog yes yes 0 0 1 By MS/MS 2 0 1 1 92.983 84.853 4 3.4314E-13 109889 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.457 88.748 9915400 9915400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46783 3559 41951 392324 309388;309389 309389 2 SHESPSDTEEDDRK Unmodified 1630.6707 0.67068653 148 O00409 FOXN3 Forkhead box protein N3 yes yes 0 0 1 By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 5.695 5.85 3 0.00018468 3833 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 57.434 55.499 29304000 0 0 0 0 2186400 0 3071400 2783800 2339500 4458700 2457800 3530400 2548600 1895900 4031100 46784 148 41952 392325;392326;392327;392328;392329;392330;392331;392332;392333;392334 309390;309391 309390 2 SHFGGPDYEEGPNSLINEEEFFDAVEAALDRQDK Unmodified 3824.7078 0.70780691 5242 Q9Y5P4 COL4A3BP Collagen type IV alpha-3-binding protein yes yes 0 0 1 By MS/MS 2 0 1 1 99.98 91.849 4 1.0508E-165 118364 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 153.48 151.78 26378000 26378000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46785 5242 41953 392335 309392;309393 309393 2 SHFVAASLSNQK Unmodified 1287.6571 0.65714914 3199 Q86XP3 DDX42 ATP-dependent RNA helicase DDX42 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.06 2.58 2 15 2 1 1 1 1 1 1 2 1 2 1 1 2 33.036 32.475 2;3 3.621E-13 47871 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 199.68 199.68 426850000 252070000 0 0 7045600 6711100 12875000 10831000 12596000 7969200 23926000 18192000 25629000 13307000 9559000 26133000 46786 3199 41954 392336;392337;392338;392339;392340;392341;392342;392343;392344;392345;392346;392347;392348;392349;392350;392351;392352 309394;309395;309396;309397;309398;309399;309400;309401;309402;309403;309404;309405 309400 6 SHGIDLDHNR Unmodified 1162.5479 0.54793304 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 1 1 2 1 1 1 2 15.284 15.477 3 0.001403 15042 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 85.622 73.046 304050000 0 0 0 10651000 8582800 20730000 18729000 18764000 11101000 26368000 1444900 41408000 41637000 35883000 68751000 46787 4634 41955 392353;392354;392355;392356;392357;392358;392359;392360;392361;392362;392363;392364;392365;392366 309406;309407;309408;309409;309410;309411;309412;309413;309414;309415;309416 309414 4 SHGLEPAAPSPR Unmodified 1217.6153 0.61528433 4999 Q9ULL5 PRR12 Proline-rich protein 12 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.468 26.668 3 0.00049977 27206 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.116 46.54 101090000 0 0 0 8750900 4871600 8117800 8332400 9002900 5898700 8771000 9071200 11443000 9495800 7429000 9908300 46788 4999 41956 392367;392368;392369;392370;392371;392372;392373;392374;392375;392376;392377;392378 309417;309418;309419;309420;309421;309422;309423;309424 309419 7 SHGLFGLNENQLR Unmodified 1483.7532 0.75317479 3863 Q96H79 ZC3HAV1L Zinc finger CCCH-type antiviral protein 1-like yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 67.215 67.294 3 0.0023533 77259 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 52.463 46.74 6992400 0 0 0 0 0 4846000 0 0 0 0 0 0 0 2146400 0 46789 3863 41957 392379;392380 309425 309425 1 SHGLLVQQALPK Unmodified 1289.7456 0.74557022 4334 Q9H0P0 NT5C3A Cytosolic 5'-nucleotidase 3A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.43 2.06 2 26 1 1 2 2 2 2 2 2 3 2 3 2 2 2 56.45 56.08 2;3 0.0023782 63372 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 59.57 50.68 368350000 72934000 18094000 0 24463000 15404000 20039000 21524000 22401000 15666000 22050000 23079000 41568000 23291000 16998000 30840000 46790 4334 41958 392381;392382;392383;392384;392385;392386;392387;392388;392389;392390;392391;392392;392393;392394;392395;392396;392397;392398;392399;392400;392401;392402;392403;392404;392405;392406;392407;392408 309426;309427;309428;309429;309430;309431;309432;309433;309434;309435;309436;309437;309438;309439;309440;309441;309442;309443;309444;309445;309446 309437 16 SHGLQNQPWQK Unmodified 1321.6527 0.65273247 2221 Q12986 NFX1 Transcriptional repressor NF-X1 yes yes 0 0 0 By MS/MS 2 0 1 1 35.855 29.508 3 0.016134 41286 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.829 37.918 25044000 25044000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46791 2221 41959 392409 309447 309447 1 SHHAASTTTAPTPAAR Unmodified 1575.7754 0.7753668 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 9.9542 10.226 3 4.1727E-06 6512 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 61.649 54.117 134070000 0 0 0 0 0 0 0 9847300 0 0 18371000 31620000 17423000 19962000 36850000 46792 3119 41960 392410;392411;392412;392413;392414;392415 309448;309449;309450;309451;309452;309453 309449 4 SHHANSPTAGAAK Unmodified 1247.6007 0.6006969 2549 Q15555 MAPRE2 Microtubule-associated protein RP/EB family member 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 2 2 1 5.0189 1.9145 2;3 3.4189E-25 5151 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 185.84 154.08 766310000 702290000 51930000 12091000 0 0 0 0 0 0 0 0 0 0 0 0 46793 2549 41961 392416;392417;392418;392419;392420 309454;309455;309456;309457 309456 4 SHHLQLQVIPVPISCSTTDDIK Unmodified 2487.2792 0.27915833 2862 Q69YN2 CWF19L1 CWF19-like protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 88.081 79.95 3 0.0030735 104115 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 32.72 29.058 9589800 9589800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46794 2862 41962 392421 309458 309458 1 SHIANEVEENDSIFVK Unmodified 1829.8796 0.8795571 4236 Q9BXW9 FANCD2 Fanconi anemia group D2 protein yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 69.865 63.874 3 0.0025181 85215 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.172 40.559 20490000 7168100 0 13322000 0 0 0 0 0 0 0 0 0 0 0 0 46795 4236 41963 392422;392423 309459;309460 309459 2 SHILTHAK Unmodified 905.5083 0.50830006 1190 P25490 YY1 Transcriptional repressor protein YY1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 8.4903 5.4501 2 0.024498 9416 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.215 55.106 94755000 79809000 9242700 5703000 0 0 0 0 0 0 0 0 0 0 0 0 46796 1190 41964 392424;392425;392426 309461;309462 309461 2 SHIMAAK Oxidation (M) 772.39016 0.39015876 1548 P48643 CCT5 T-complex protein 1 subunit epsilon yes yes 0 1 0 By MS/MS By MS/MS 2 0 6 3 3 4.6659 1.8649 2 0.027879 5629 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.866 40.496 167940000 95434000 0 72508000 0 0 0 0 0 0 0 0 0 0 0 0 46797 1548 41965 392427;392428;392429;392430;392431;392432 309463;309464;309465;309466 309464 4 SHIMPAEFSSCPLNSDEEVNK Unmodified 2390.0519 0.051860514 4341 Q9H0W9 C11orf54 Ester hydrolase C11orf54 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 74.356 69.33 3 1.6622E-72 88103 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.37 114.04 210410000 17433000 135980000 56996000 0 0 0 0 0 0 0 0 0 0 0 0 46798 4341 41966 392433;392434;392435;392436 309467;309468;309469;309470;309471 309467 5 SHIMPAEFSSCPLNSDEEVNK Oxidation (M) 2406.0468 0.046775136 4341 Q9H0W9 C11orf54 Ester hydrolase C11orf54 yes yes 0 1 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 63.795 59.543 3 3.8586E-59 74203 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 135.18 134.87 59858000 0 14348000 45510000 0 0 0 0 0 0 0 0 0 0 0 0 46799 4341 41966 392437;392438 309472;309473;309474 309474 5803 3 SHIPLAFDPTSIPR Unmodified 1549.8253 0.8252771 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.259 80.319 3 0.00020342 92704 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 57.034 50.829 206960000 0 0 0 2941400 7638600 20775000 9361200 17256000 14769000 21410000 17822000 21314000 12758000 15711000 45203000 46800 5262 41967 392439;392440;392441;392442;392443;392444;392445;392446;392447;392448;392449;392450 309475;309476;309477;309478;309479;309480;309481;309482;309483;309484;309485;309486 309477 12 SHIPSSLDNVNHK Unmodified 1446.7215 0.72154031 20 A6H8Y1 BDP1 Transcription factor TFIIIB component B'' homolog yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 34.998 30.13 3 0.0027485 42133 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.161 49.551 15855000 14453000 0 1401800 0 0 0 0 0 0 0 0 0 0 0 0 46801 20 41968 392451;392452 309487;309488 309487 2 SHIQQLRVEEDVASDLVMK Oxidation (M) 2212.1158 0.1157814 4751 Q9NYU2 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes yes 0 1 1 By MS/MS 2 0 1 1 79.336 71.205 4 0.0016149 93583 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.946 39.42 11747000 11747000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46802 4751 41969 392453 309489 309489 6127 1 SHIRTDDVHAK Unmodified 1277.6476 0.64764709 3608 Q92499 DDX1 ATP-dependent RNA helicase DDX1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 6.6962 6.6273 3 0.00062269 4127 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.48 42.349 72967000 0 0 6826400 3052700 4642300 0 0 6676100 8311200 7621800 6760100 5868100 5673900 5955600 11578000 46803 3608 41970 392454;392455;392456;392457;392458;392459;392460;392461;392462;392463;392464;392465;392466 309490;309491;309492;309493;309494;309495;309496;309497;309498;309499;309500;309501;309502 309493 13 SHISDQSPLSSK Unmodified 1284.631 0.63099397 1446 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.68 1.57 1 24 1 2 2 2 2 2 2 2 2 2 2 2 2 23.367 23.338 2;3 8.9557E-20 23516 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 174.4 130.63 1682800000 3774500 0 0 94455000 106700000 121380000 114010000 130450000 74878000 124370000 176760000 243950000 147870000 127510000 216690000 46804 1446 41971 392467;392468;392469;392470;392471;392472;392473;392474;392475;392476;392477;392478;392479;392480;392481;392482;392483;392484;392485;392486;392487;392488;392489;392490;392491 309503;309504;309505;309506;309507;309508;309509;309510;309511;309512;309513;309514;309515;309516;309517;309518;309519;309520;309521;309522;309523;309524 309519 17 SHKPEPPVAGPGR Unmodified 1327.6997 0.69968266 4693 Q9NW82 WDR70 WD repeat-containing protein 70 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 17.498 17.564 3 0.022873 17616 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 29.215 18.002 27415000 0 0 0 0 3082400 3226700 3697400 3847200 3222300 3471900 0 0 6867200 0 0 46805 4693 41972 392492;392493;392494;392495;392496;392497;392498 309525;309526;309527;309528 309526 3 SHLARQQQEK Unmodified 1223.6371 0.6370824 4976 Q9UKV3 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes yes 0 0 1 By MS/MS 2 0 1 1 5.586 2.2085 3 0.0026119 5036 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.499 46.018 73057000 73057000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46806 4976 41973 392499 309529 309529 1 SHLDSPEAR Unmodified 1010.4781 0.47812215 4141 Q9BTD8 RBM42 RNA-binding protein 42 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 9.4573 9.5708 2 0.012192 8346 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 61.679 51.211 54801000 0 0 0 4574700 5360500 3452400 6222900 4623600 4308400 4017000 0 8138400 6452200 5979700 1671400 46807 4141 41974 392500;392501;392502;392503;392504;392505;392506;392507;392508;392509;392510 309530;309531;309532;309533;309534;309535;309536;309537;309538 309530 7 SHLEGELRPK Unmodified 1164.6251 0.62512073 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 20.446 20.133 3 0.0027971 32104 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.102 52.089 184600000 20747000 0 0 13624000 11277000 17771000 15228000 20277000 13777000 22709000 11240000 0 15632000 21574000 746660 46808 5262 41975 392511;392512;392513;392514;392515;392516;392517;392518;392519;392520;392521;392522 309539;309540;309541;309542;309543;309544;309545 309541 2 SHLEVPLEENVNRR Unmodified 1690.8751 0.87508084 3784 Q96CT7 CCDC124 Coiled-coil domain-containing protein 124 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 48.446 48.911 3 3.088E-15 53899 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.531 73.209 69477000 0 0 0 0 0 0 0 0 0 0 12863000 0 0 33173000 23440000 46809 3784 41976 392523;392524;392525;392526 309546;309547;309548;309549;309550;309551;309552 309547 7 SHLGNVHDQDN Unmodified 1234.5327 0.53267691 3570 Q8WW12 PCNP PEST proteolytic signal-containing nuclear protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.14 2.8 6 1 2 2 2 1 8.9644 6.3376 2;3 1.4326E-16 7700 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 169.58 90.461 1863700000 1123500000 458350000 271460000 0 0 0 0 0 0 0 0 10406000 0 0 0 46810 3570 41977 392527;392528;392529;392530;392531;392532;392533 309553;309554;309555;309556 309555 3 SHLIQVER Unmodified 980.54033 0.54032847 5278 Q9Y6D9 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.685 26.884 2 0.015394 28753 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 68.95 29.977 134800000 0 0 0 8454700 5597100 7812500 9184700 14159000 8979200 11846000 13705000 13760000 15643000 16174000 9489000 46811 5278 41978 392534;392535;392536;392537;392538;392539;392540;392541;392542;392543;392544;392545 309557;309558 309558 2 SHLIQVEREK Unmodified 1237.6779 0.67788459 5278 Q9Y6D9 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 20.626 20.859 3 0.0013528 21308 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 85.958 68.149 181870000 0 0 0 0 4641100 11067000 8993800 11544000 5933200 19735000 25956000 32386000 21161000 10310000 30140000 46812 5278 41979 392546;392547;392548;392549;392550;392551;392552;392553;392554;392555;392556 309559;309560;309561;309562;309563;309564;309565;309566;309567;309568;309569;309570 309561 12 SHLLSSSDAEGNYRDSLETLPSTK Unmodified 2606.246 0.24600353 2195 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF yes yes 0 0 1 By MS/MS 2 0 1 1 73.338 65.142 4 0.00017223 86448 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.578 49.697 37270000 37270000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46813 2195 41980 392557 309571 309571 1 SHLMCTDDLK Oxidation (M) 1234.5322 0.5322079 5383 yes yes 0 1 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 7.1944 7.31 2 0.025305 4741 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.854 14.955 + 83747000 0 0 0 4273800 3688600 5417500 3667800 4221500 3582500 6827900 22033000 0 0 5530900 24503000 46814 5383 41981 392558;392559;392560;392561;392562;392563;392564;392565;392566;392567 309572 309572 0 SHLMSLYSACSSEVPHGPVDQK Oxidation (M) 2444.11 0.11004409 693 O95816 BAG2 BAG family molecular chaperone regulator 2 yes yes 0 1 0 By MS/MS 2 0 1 1 66.086 57.791 3 6.0642E-85 77523 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 148.2 139.98 22821000 22821000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46815 693 41982 392568 309573;309574 309574 840 2 SHLMSLYSACSSEVPHGPVDQK Unmodified 2428.1151 0.11512947 693 O95816 BAG2 BAG family molecular chaperone regulator 2 yes yes 0 0 0 By MS/MS 2 0 2 2 74.712 66.581 3;4 3.7333E-85 87949 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 150.91 139.46 86709000 86709000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46816 693 41982 392569;392570 309575;309576 309576 2 SHLNQLK Unmodified 838.4661 0.4661009 4378 Q9H3H1 TRIT1 tRNA dimethylallyltransferase, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 11.826 9.5615 2 0.040529 12225 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 80.462 44.969 8775000 0 0 8775000 0 0 0 0 0 0 0 0 0 0 0 0 46817 4378 41983 392571 309577 309577 1 SHLVHGSSPGVMGTSVATSASK Unmodified 2096.0321 0.03205177 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 2 2 1 1 2 2 2 1 1 39.798 40.088 3;4 4.8006E-05 44853 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 46.178 41.957 212420000 0 0 0 0 5646500 25854000 0 24762000 8507500 13742000 32889000 34865000 25318000 18488000 22343000 46818 1364 41984 392572;392573;392574;392575;392576;392577;392578;392579;392580;392581;392582;392583;392584;392585;392586 309578;309579;309580;309581;309582;309583;309584;309585;309586;309587;309588;309589 309579 12 SHLVHGSSPGVMGTSVATSASK Oxidation (M) 2112.027 0.026966392 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.6 1.74 1 19 1 1 2 1 2 1 2 2 2 2 2 2 30.3 30.209 3;4 7.9476E-67 32829 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 121.63 89.081 297020000 27124000 0 0 5406200 19871000 0 13618000 24577000 7927700 21522000 27027000 38853000 48517000 35868000 26710000 46819 1364 41984 392587;392588;392589;392590;392591;392592;392593;392594;392595;392596;392597;392598;392599;392600;392601;392602;392603;392604;392605;392606 309590;309591;309592;309593;309594;309595;309596;309597;309598;309599;309600;309601 309597 2121 12 SHLVQPK Unmodified 807.46029 0.46028724 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By MS/MS 2 0 1 1 9.904 7.6602 2 0.015215 9795 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 119.56 40.829 163170000 0 0 163170000 0 0 0 0 0 0 0 0 0 0 0 0 46820 2291 41985 392607 309602 309602 1 SHMMDVQGSTQDSAIK Oxidation (M) 1749.7662 0.7661836 982 P13667 PDIA4 Protein disulfide-isomerase A4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 4 12 2 2 1 1 1 2 1 1 2 1 1 1 27.912 27.128 3 0.00023691 30229 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 57.52 52.629 209490000 0 95538000 13116000 4458100 0 4877700 7770400 13358000 3341800 6942800 28686000 0 9239800 9326900 12832000 46821 982 41986 392608;392609;392610;392611;392612;392613;392614;392615;392616;392617;392618;392619;392620;392621;392622;392623 309603;309604;309605;309606;309607;309608;309609;309610;309611;309612;309613;309614 309608 1323;1324 12 SHMMDVQGSTQDSAIK Unmodified 1733.7713 0.77126898 982 P13667 PDIA4 Protein disulfide-isomerase A4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 4 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 38.384 37.424 2;3 5.1582E-41 48906 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 171.57 161.89 367970000 0 114710000 14178000 8611800 7672200 10700000 7714700 12819000 10393000 13584000 40010000 20765000 18916000 20608000 67292000 46822 982 41986 392624;392625;392626;392627;392628;392629;392630;392631;392632;392633;392634;392635;392636;392637;392638;392639 309615;309616;309617;309618;309619;309620 309616 5 SHMMDVQGSTQDSAIK 2 Oxidation (M) 1765.7611 0.76109822 982 P13667 PDIA4 Protein disulfide-isomerase A4 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.8 3.92 4 6 2 2 1 1 1 1 1 1 18.602 17.463 2;3 7.0884E-23 22911 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.28 111.59 146030000 0 53031000 15446000 13319000 0 0 7967200 0 0 0 0 16491000 14928000 9147500 15699000 46823 982 41986 392640;392641;392642;392643;392644;392645;392646;392647;392648;392649 309621;309622;309623;309624;309625;309626;309627;309628;309629 309622 1323;1324 7 SHMSGSPGPGGSNTAPSTPVIGGSDKPGMEEK Oxidation (M) 3068.3815 0.38152751 4 A0FGR8 ESYT2 Extended synaptotagmin-2 yes yes 0 1 1 By MS/MS 2 0 1 1 50.197 42.296 4 4.6861E-12 58527 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.311 51.936 10845000 10845000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46824 4 41987 392650 309630;309631 309630 8 2 SHMSGSPGPGGSNTAPSTPVIGGSDKPGMEEK Unmodified 3052.3866 0.38661289 4 A0FGR8 ESYT2 Extended synaptotagmin-2 yes yes 0 0 1 By MS/MS 2 0 1 1 56.152 48.004 4 9.6389E-10 65645 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.709 43.205 12507000 12507000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46825 4 41987 392651 309632 309632 1 SHNSALYSQVQK Unmodified 1360.6735 0.67352749 4048 Q99704 DOK1 Docking protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 6 2 2 2 28.498 24.164 2;3 6.8236E-38 34086 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 199.7 169.95 105430000 72946000 19013000 13476000 0 0 0 0 0 0 0 0 0 0 0 0 46826 4048 41988 392652;392653;392654;392655;392656;392657 309633;309634;309635;309636 309634 3 SHNSWENSDDSR Unmodified 1432.5603 0.56034822 4505 Q9HC35 EML4 Echinoderm microtubule-associated protein-like 4 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.314 11.43 3 0.047154 9527 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 29.912 27.045 23282000 0 0 0 1692100 1191800 1501900 1493300 950720 982140 2558800 0 3092500 2860700 2700800 4256900 46827 4505 41989 392658;392659;392660;392661;392662;392663;392664;392665;392666;392667;392668 309637 309637 1 SHNSWENSDDSRNK Unmodified 1674.6982 0.69823869 4505 Q9HC35 EML4 Echinoderm microtubule-associated protein-like 4 yes yes 0 0 1 By MS/MS By MS/MS 2 0 4 2 2 10.009 6.9542 3;4 0.0007805 11286 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.78 83.324 35431000 28563000 0 6868200 0 0 0 0 0 0 0 0 0 0 0 0 46828 4505 41990 392669;392670;392671;392672 309638;309639 309638 1 SHPDLLQLPR Unmodified 1174.6459 0.64585618 2646 Q27J81 INF2 Inverted formin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.095 63.19 3 0.001285 72045 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 73.985 61.029 195040000 0 0 0 9172900 8618500 15075000 19963000 18135000 12379000 17137000 17633000 18379000 15314000 17063000 26167000 46829 2646 41991 392673;392674;392675;392676;392677;392678;392679;392680;392681;392682;392683;392684 309640;309641;309642;309643;309644;309645;309646;309647;309648;309649;309650;309651;309652;309653 309640 11 SHPLDLSPNVQSRDAIQK Unmodified 2004.0389 0.038851707 4994 Q9ULH1 ASAP1 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 58.611 50.405 3 0.00062058 68608 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.52 47.389 13282000 13282000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46830 4994 41992 392685 309654 309654 1 SHPLDPIDTVDFER Unmodified 1639.7842 0.78420015 1528 P47897 QARS Glutamine--tRNA ligase yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 74.283 74.315 3 9.1986E-05 84713 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 64.104 54.816 61000000 0 0 0 2900300 3304600 10513000 3999800 6314000 2879800 0 6557400 10612000 6030000 7888500 0 46831 1528 41993 392686;392687;392688;392689;392690;392691;392692;392693;392694;392695;392696 309655;309656;309657;309658;309659;309660;309661;309662;309663;309664 309661 10 SHPLPETAVR Unmodified 1105.588 0.58800695 4521 Q9HCS7 XAB2 Pre-mRNA-splicing factor SYF1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 25.854 26.049 2 0.035524 26683 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 41.448 28.921 66602000 0 0 0 0 3924400 7139700 5765000 4196800 4193300 5091100 6752200 0 10956000 6554000 12030000 46832 4521 41994 392697;392698;392699;392700;392701;392702;392703;392704;392705;392706 309665 309665 1 SHPSAWPFMEPVK Unmodified 1511.7231 0.72312022 3668 Q92830 KAT2A Histone acetyltransferase KAT2A yes yes 0 0 0 By MS/MS 2 0 1 1 84.249 76.118 3 0.0023476 99455 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.211 38.444 11024000 11024000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46833 3668 41995 392707 309666 309666 1 SHPSPQAK Acetyl (Protein N-term) 892.44028 0.44028008 2162 Q08752 PPID Peptidyl-prolyl cis-trans isomerase D yes yes 1 0 0 By MS/MS By MS/MS 2 0 3 1 2 6.7587 3.4259 2 0.0034024 6065 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.741 20.552 80947000 30125000 50822000 0 0 0 0 0 0 0 0 0 0 0 0 0 46834 2162 41996 392708;392709;392710 309667;309668;309669 309668 3 SHPSWLPPK Acetyl (Protein N-term) 1089.5607 0.56072956 3706 Q93052 LPP Lipoma-preferred partner yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 7.33 3.77 3 6 1 1 1 1 1 1 1 1 1 60.202 57.339 2 3.3187E-07 77682 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 163.9 138.16 199410000 55015000 130790000 3923900 0 0 0 0 1836000 0 0 5497500 0 2345500 0 0 46835 3706 41997 392711;392712;392713;392714;392715;392716;392717;392718;392719 309670;309671;309672;309673;309674;309675;309676;309677;309678;309679;309680;309681;309682;309683;309684;309685;309686;309687;309688 309682 19 SHQGLDRQELSFAAR Unmodified 1713.8547 0.85467975 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 2 1 1 2 2 2 2 2 2 2 47.086 47.417 3;4 9.5355E-05 52200 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 97.797 83.325 891630000 0 0 0 0 0 101850000 5863100 17821000 24248000 82124000 65554000 116870000 61510000 60158000 355630000 46836 1565 41998 392720;392721;392722;392723;392724;392725;392726;392727;392728;392729;392730;392731;392732;392733;392734;392735;392736;392737 309689;309690;309691;309692;309693;309694;309695;309696;309697;309698;309699;309700;309701;309702;309703;309704;309705;309706;309707 309696 17 SHQKPPQGMEIK Oxidation (M) 1394.6976 0.69763375 653 O95394 PGM3 Phosphoacetylglucosamine mutase yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2 0 5 2 1 2 10.848 7.7459 2;3 1.2055E-05 11879 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 106.26 95.045 249620000 211220000 12479000 25917000 0 0 0 0 0 0 0 0 0 0 0 0 46837 653 41999 392738;392739;392740;392741;392742 309708;309709;309710;309711;309712;309713 309710 795 5 SHQKPPQGMEIK Unmodified 1378.7027 0.70271913 653 O95394 PGM3 Phosphoacetylglucosamine mutase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 4 3.46 3 1 2 1 1 22.527 19.419 2;3 0.00028819 28422 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.515 67.314 258790000 223470000 0 27766000 0 0 0 0 0 0 0 0 0 0 0 7550900 46838 653 41999 392743;392744;392745;392746 309714;309715;309716;309717;309718;309719;309720;309721;309722;309723;309724;309725 309717 12 SHQNASAIIK Unmodified 1067.5724 0.57235688 3466 Q8NI35 INADL InaD-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 15.198 15.566 2 0.0084468 15066 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.019 34.125 9334000 0 0 0 0 0 0 0 0 0 2823200 0 2953100 0 0 3557700 46839 3466 42000 392747;392748;392749;392750 309726;309727;309728 309728 3 SHQPLSCLTEK Acetyl (Protein N-term) 1340.6395 0.63945017 3785 Q96CV9 OPTN Optineurin yes yes 1 0 0 By MS/MS 2 0 1 1 55.481 49.666 2 0.0014422 64105 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.478 51.778 47264000 0 47264000 0 0 0 0 0 0 0 0 0 0 0 0 0 46840 3785 42001 392751 309729 309729 1 SHQTGIQASEDVK Acetyl (Protein N-term) 1440.6845 0.68448611 2190 Q12792 TWF1 Twinfilin-1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.28 3.87 2 3 1 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 33.93 33.311 2 0 30680 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 296.17 272.85 423050000 82948000 103750000 1863400 9717100 5808500 14123000 14714000 7776600 7173200 13129000 29346000 35763000 11617000 24162000 61161000 46841 2190 42002 392752;392753;392754;392755;392756;392757;392758;392759;392760;392761;392762;392763;392764;392765;392766;392767;392768;392769 309730;309731;309732;309733;309734;309735;309736;309737;309738;309739;309740;309741;309742;309743;309744;309745;309746;309747;309748 309740 19 SHRPQQNVGVQGAATR Unmodified 1704.8768 0.87681218 485 O75362 ZNF217 Zinc finger protein 217 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.83 13.992 3 0.00014496 13125 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 70.98 63.264 56918000 0 0 0 2610000 2879900 3511800 2625500 4051400 2242200 5665900 4474900 9153400 5188700 3825400 10689000 46842 485 42003 392770;392771;392772;392773;392774;392775;392776;392777;392778;392779;392780;392781 309749;309750;309751;309752;309753;309754;309755;309756;309757;309758;309759 309754 11 SHRTEMDWVLK Unmodified 1400.6871 0.68706906 1692 P52597 HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 54.888 55.506 3 0.046422 62348 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.159 16.614 25074000 0 0 0 0 0 0 0 0 0 0 0 4184800 0 0 20889000 46843 1692 42004 392782;392783 309760 309760 1 SHSAQQPVLVSQTLDIHK Unmodified 1987.0487 0.048688112 4900 Q9UHF7 TRPS1 Zinc finger transcription factor Trps1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 67.816 61.041 3;4 0.00089819 81668 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.942 47.673 77245000 72051000 0 5194000 0 0 0 0 0 0 0 0 0 0 0 0 46844 4900 42005 392784;392785;392786 309761;309762;309763;309764 309763 3 SHSDASVGSHSSTESEHGSSSPR Unmodified 2310.9697 0.9697221 2993 Q6XZF7 DNMBP Dynamin-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 6.2862 6.4023 4 1.7945E-20 3728 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.557 85.197 97216000 0 0 0 4900800 5203300 6218700 7134600 5946100 0 8052700 12882000 18926000 7834700 11018000 9098700 46845 2993 42006 392787;392788;392789;392790;392791;392792;392793;392794;392795;392796;392797 309765;309766;309767;309768;309769;309770 309767 5 SHSECGIIEK Unmodified 1158.5339 0.53392246 4902 Q9UHI6 DDX20 Probable ATP-dependent RNA helicase DDX20 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 20.628 16.918 2 0.00090706 21469 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 130.66 70.637 12368000 4213200 0 8155100 0 0 0 0 0 0 0 0 0 0 0 0 46846 4902 42007 392798;392799;392800 309771;309772 309771 2 SHSESASPSALSSSPNNLSPTGWSQPK Unmodified 2739.2736 0.27361526 769 P04049 RAF1 RAF proto-oncogene serine/threonine-protein kinase yes yes 0 0 0 By MS/MS 10 0 1 1 66.054 66.236 3 9.3915E-08 75958 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 42.454 35.656 3846000 0 0 0 0 0 0 0 3846000 0 0 0 0 0 0 0 46847 769 42008 392801 309773 309773 1 SHSGFQK Unmodified 789.37695 0.37695154 4837 Q9UBD5 ORC3 Origin recognition complex subunit 3 yes yes 0 0 0 By MS/MS 2 0 1 1 0.78249 -2.505 2 0.023949 924 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 131.04 97.298 63260000 63260000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46848 4837 42009 392802 309774 309774 1 SHSGGIPGSLSGGISHNSMEVTK Unmodified 2238.0699 0.069893839 2850 Q684P5 RAP1GAP2 Rap1 GTPase-activating protein 2 yes yes 0 0 0 By MS/MS 2 0 2 2 65.289 57.001 3;4 0.00041256 76483 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.526 36.105 28919000 28919000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46849 2850 42010 392803;392804 309775;309776 309775 2 SHSHTQEQTGETASEEQRPGGPSANVTK Unmodified 2949.3449 0.34488273 4211 Q9BWH6 RPAP1 RNA polymerase II-associated protein 1 yes yes 0 0 1 By matching By MS/MS By matching 10 0 3 1 1 1 19.793 19.999 4 0.0045483 20602 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 23.394 16.67 10628000 0 0 0 0 0 3466500 0 0 0 0 0 0 3941600 3220200 0 46850 4211 42011 392805;392806;392807 309777 309777 1 SHSIFLINVK Unmodified 1156.6604 0.66044361 1328 P33176 KIF5B Kinesin-1 heavy chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 2 1 2 2 2 1 2 2 2 2 72.526 72.706 2;3 0.0017319 82705 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.755 73.627 137870000 0 0 0 0 0 16404000 3862000 8393800 9326700 13250000 7705100 25014000 10793000 7592200 35527000 46851 1328 42012 392808;392809;392810;392811;392812;392813;392814;392815;392816;392817;392818;392819;392820;392821;392822;392823;392824;392825 309778;309779;309780;309781;309782;309783;309784;309785;309786;309787 309781 9 SHSITNMEIGGLK Unmodified 1385.6973 0.6972994 3976 Q96RT1 ERBB2IP Protein LAP2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 66.373 58.871 2;3 1.3159E-08 78641 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.705 73.51 45123000 31315000 13808000 0 0 0 0 0 0 0 0 0 0 0 0 0 46852 3976 42013 392826;392827;392828 309788;309789;309790 309789 3 SHSLSQHTATSSK Unmodified 1369.6586 0.65860571 1600 P49790 NUP153 Nuclear pore complex protein Nup153 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 5.6344 5.7518 3 8.1573E-09 3696 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 99.161 80.829 209900000 0 0 0 14462000 12272000 18095000 19216000 20691000 17467000 17215000 15479000 19971000 14422000 18032000 22579000 46853 1600 42014 392829;392830;392831;392832;392833;392834;392835;392836;392837;392838;392839;392840 309791;309792;309793;309794;309795;309796;309797;309798;309799;309800;309801 309796 10 SHSPSASQSGSQLR Unmodified 1427.6753 0.6753184 3573 Q8WWI1 LMO7 LIM domain only protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 9.5828 9.7155 3 2.6572E-40 6325 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 138.02 126.33 401700000 0 0 0 23422000 19764000 21709000 32849000 20327000 21709000 28658000 67590000 58346000 33593000 24005000 49725000 46854 3573 42015 392841;392842;392843;392844;392845;392846;392847;392848;392849;392850;392851;392852 309802;309803;309804;309805;309806;309807;309808;309809;309810;309811;309812;309813 309806 12 SHSRTLTPTPDGK Unmodified 1395.7106 0.71064128 3679 Q92888 ARHGEF1 Rho guanine nucleotide exchange factor 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 5 2 1 2 17.935 14.457 2;3 1.1655E-12 21082 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 144.17 121.59 480770000 385020000 11142000 84610000 0 0 0 0 0 0 0 0 0 0 0 0 46855 3679 42016 392853;392854;392855;392856;392857 309814;309815;309816 309816 3 SHSSESLGILK Unmodified 1156.6088 0.60880197 2305 Q13506 NAB1 NGFI-A-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 49.24 42.689 2;3 0.00030204 59241 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 109.29 54.874 45109000 38819000 0 6289800 0 0 0 0 0 0 0 0 0 0 0 0 46856 2305 42017 392858;392859;392860 309817;309818;309819 309817 2 SHSSGVGKPLSPER Unmodified 1436.7372 0.73719038 1456 P42357 HAL Histidine ammonia-lyase yes yes 0 0 1 By MS/MS 10 0 1 1 14.859 14.724 3 0.0020943 14316 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 65.329 62.378 20095000 0 0 0 20095000 0 0 0 0 0 0 0 0 0 0 0 46857 1456 42018 392861 309820 309820 0 SHSSPASLQLGTGAGAAGSPAQQHAHLR Unmodified 2693.3382 0.33822163 4309 Q9GZV5 WWTR1 WW domain-containing transcription regulator protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 44.913 45.654 4 1.2125E-14 50206 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.986 49.528 25176000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25176000 46858 4309 42019 392862 309821 309821 1 SHSTEPNLSSFLNDPNPMK Oxidation (M) 2129.9688 0.96878281 5054 Q9UPQ0 LIMCH1 LIM and calponin homology domains-containing protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.012 74.073 3 2.5716E-12 85817 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 87.85 72.696 166850000 0 0 0 10040000 8729800 15458000 12195000 12151000 14258000 17985000 16614000 13776000 11790000 11812000 22045000 46859 5054 42020 392863;392864;392865;392866;392867;392868;392869;392870;392871;392872;392873;392874 309822;309823;309824;309825;309826;309827;309828;309829;309830;309831;309832;309833;309834;309835;309836;309837;309838;309839;309840;309841 309837 6407 20 SHSTEPNLSSFLNDPNPMK Unmodified 2113.9739 0.97386819 5054 Q9UPQ0 LIMCH1 LIM and calponin homology domains-containing protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 79.585 79.784 3 0.024336 91848 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 24.679 20.959 19053000 0 0 0 0 0 0 0 3024400 1638500 0 0 0 0 0 14390000 46860 5054 42020 392875;392876;392877 309842 309842 1 SHSTESFK Unmodified 921.41921 0.41921028 1697 P52739 ZNF131 Zinc finger protein 131 yes yes 0 0 0 By MS/MS 2 0 1 1 7.7708 4.2557 2 0.012189 7607 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 105.14 66.344 22903000 22903000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46861 1697 42021 392878 309843 309843 1 SHTDQLVLIFAGK Unmodified 1427.7773 0.77726428 5018 Q9UMX0 UBQLN1 Ubiquilin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 2 81.962 81.128 2;3 2.3969E-05 93155 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.189 83.041 90133000 10556000 0 4061000 0 0 8567300 3456800 3834100 6348600 6580200 5384100 0 0 6065500 35279000 46862 5018 42022 392879;392880;392881;392882;392883;392884;392885;392886;392887;392888;392889;392890;392891 309844;309845;309846;309847;309848;309849;309850;309851;309852;309853;309854 309846 11 SHTFPELAYRK Unmodified 1347.6935 0.69353465 4625 Q9NSD9 FARSB Phenylalanine--tRNA ligase beta subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 43.485 43.821 3 0.00031925 47764 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.056 48.114 127520000 0 0 0 0 0 0 0 12926000 40085000 9287200 15253000 0 12340000 0 37627000 46863 4625 42023 392892;392893;392894;392895;392896;392897;392898 309855;309856;309857;309858;309859;309860 309856 5 SHTILLVQPTK Acetyl (Protein N-term) 1277.7343 0.73433683 2013 P84090 ERH Enhancer of rudimentary homolog yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 69.21 67.887 2 0 88882 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 297.92 274.49 3855200000 479490000 1298500000 0 108090000 133730000 120570000 135850000 138910000 93623000 158740000 206030000 264750000 219070000 198400000 299430000 46864 2013 42024 392899;392900;392901;392902;392903;392904;392905;392906;392907;392908;392909;392910;392911;392912;392913;392914 309861;309862;309863;309864;309865;309866;309867;309868;309869;309870;309871;309872;309873;309874;309875;309876;309877;309878;309879;309880;309881 309872 21 SHTPSPTSPK Unmodified 1037.5142 0.5141733 1408 P40123 CAP2 Adenylyl cyclase-associated protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 9.1545 6.0689 2 1.3684E-05 7904 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 126.24 101.42 341020000 209360000 104510000 27164000 0 0 0 0 0 0 0 0 0 0 0 0 46865 1408 42025 392915;392916;392917 309882;309883;309884 309884 3 SHTSEGAHLDITPNSGAAGNSAGPK Unmodified 2375.1102 0.11017875 3632 Q92597 NDRG1 Protein NDRG1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.24 2.35 2 19 2 1 1 1 2 2 1 2 2 1 2 2 2 38.037 37.896 3;4 2.9186E-06 41041 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 42.746 34.849 193470000 0 0 10136000 4530500 4705900 18467000 12556000 11727000 6370700 20957000 17679000 17160000 16938000 15306000 36938000 46866 3632 42026 392918;392919;392920;392921;392922;392923;392924;392925;392926;392927;392928;392929;392930;392931;392932;392933;392934;392935;392936;392937;392938 309885;309886;309887;309888;309889;309890;309891;309892;309893;309894;309895;309896;309897;309898;309899;309900;309901;309902 309901 16 SHTSSNYDSYKK Unmodified 1415.6317 0.63172225 4752 Q9NYV4 CDK12 Cyclin-dependent kinase 12 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 6.9622 7.0749 3 0.0061019 4948 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 41.242 32.541 36419000 0 0 0 4297300 1776000 0 4732600 6062400 0 6170100 7716200 2323300 0 0 3341400 46867 4752 42027 392939;392940;392941;392942;392943;392944;392945;392946;392947 309903;309904;309905;309906 309906 4 SHTVAIDNQIFK Unmodified 1371.7147 0.71466402 3453 Q8NG31 CASC5 Protein CASC5 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 2 1 59.207 57.666 3 5.1071E-05 80208 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 105.46 77.177 69696000 34735000 0 9254400 0 0 4118200 0 0 0 0 0 0 4215200 7248900 10124000 46868 3453 42028 392948;392949;392950;392951;392952;392953;392954 309907;309908;309909;309910;309911 309908 4 SHTVVIGFGPSELQELGK Unmodified 1896.9945 0.99452728 3453 Q8NG31 CASC5 Protein CASC5 yes yes 0 0 0 By MS/MS 2 0 1 1 89.299 81.168 3 0.00028532 105471 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 59.252 49.503 8878300 8878300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46869 3453 42029 392955 309912 309912 1 SHVAVENALGLDQQFAGLDLNSSDNQSGGSTASK Acetyl (Protein N-term) 3458.6186 0.61859797 170 O00571 DDX3X ATP-dependent RNA helicase DDX3X yes yes 1 0 0 By MS/MS By MS/MS 2.2 0.4 4 1 4 1 91.928 88.051 3;4 3.8355E-281 109372 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 220.94 215.73 579620000 0 566130000 13489000 0 0 0 0 0 0 0 0 0 0 0 0 46870 170 42030 392956;392957;392958;392959;392960 309913;309914;309915;309916;309917;309918;309919 309914 6 SHVDLFPK Unmodified 941.49707 0.49706667 3042 Q7L0Y3 TRMT10C Mitochondrial ribonuclease P protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 49.105 45.203 2 0.020925 57308 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 85.212 62.192 13107000 0 0 13107000 0 0 0 0 0 0 0 0 0 0 0 0 46871 3042 42031 392961 309920 309920 1 SHVEDGDIAGAPASSPEAPPAEQDPVQLK Unmodified 2911.3836 0.38355964 4817 Q9P2E9 RRBP1 Ribosome-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.12 3.26 1 1 6 2 1 1 1 1 1 1 66.814 65.522 3 1.3909E-08 74768 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.819 28.386 66150000 0 27519000 0 3131900 3346800 0 0 0 0 0 0 13051000 4671700 6045000 8384800 46872 4817 42032 392962;392963;392964;392965;392966;392967;392968;392969 309921;309922;309923;309924;309925 309922 5 SHVTEEEEEEEEEESDS Unmodified 2021.7345 0.73452816 569 O75971 SNAPC5 snRNA-activating protein complex subunit 5 yes yes 0 0 0 By MS/MS 10 0 1 1 23.096 23.769 2 0.021082 24557 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 43.084 43.084 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46873 569 42033 392970 309926 309926 1 SHVVREDLNPR Unmodified 1320.6898 0.68984626 4128 Q9BSJ8 ESYT1 Extended synaptotagmin-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 19.898 20.106 3 0.0055473 21018 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 51.998 36.078 128880000 0 0 0 11315000 12484000 0 11989000 7359000 7148600 11716000 11118000 24902000 0 7988200 22857000 46874 4128 42034 392971;392972;392973;392974;392975;392976;392977;392978;392979;392980 309927;309928;309929;309930;309931;309932;309933 309932 6 SHWLGPNYTK Unmodified 1201.588 0.58800695 2053 Q01433 AMPD2 AMP deaminase 2 yes yes 0 0 0 By MS/MS 2 0 1 1 49.822 41.921 3 0.001678 58019 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.862 72.697 79417000 79417000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46875 2053 42035 392981 309934 309934 0 SHYAAEEISEK Unmodified 1262.5779 0.57789577 241 O15020 SPTBN2 Spectrin beta chain, non-erythrocytic 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 25.261 21.679 3 0.001115 27478 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 82.171 57.879 14502000 0 8440400 6062100 0 0 0 0 0 0 0 0 0 0 0 0 46876 241 42036 392982;392983 309935;309936 309936 2 SHYKPEQMGK Oxidation (M) 1219.5656 0.56555694 1449 P42226 STAT6 Signal transducer and activator of transcription 6 yes yes 0 1 1 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 5.5403 5.6335 3 0.0084453 3510 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 44.863 35.376 59263000 0 0 0 6450600 4414700 10585000 0 0 3841800 0 0 9206100 8758500 9796600 6209100 46877 1449 42037 392984;392985;392986;392987;392988;392989;392990;392991 309937 309937 2284 1 SHYNINCNSTR Unmodified 1364.5891 0.58914593 4630 Q9NSV4 DIAPH3 Protein diaphanous homolog 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 14.788 14.971 3 0.0045556 14469 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 75.819 71.303 109390000 0 0 0 10817000 5226300 9552200 0 7263000 0 8645200 23993000 14557000 13185000 0 16147000 46878 4630 42038 392992;392993;392994;392995;392996;392997;392998;392999;393000;393001 309938;309939;309940;309941;309942;309943;309944;309945 309944 6 SIAAATSALVK Unmodified 1030.6023 0.60226003 5187;5201 Q9Y490;Q9Y4G6 TLN1;TLN2 Talin-1;Talin-2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 55.997 54.585 2 3.826E-09 68487 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 133.13 53.421 2351300000 837060000 994450000 67376000 22724000 18732000 0 33712000 25120000 21200000 63960000 50030000 62673000 39835000 36920000 77536000 46879 5187;5201 42039 393002;393003;393004;393005;393006;393007;393008;393009;393010;393011;393012;393013;393014;393015;393016;393017 309946;309947;309948;309949;309950;309951;309952;309953;309954;309955;309956;309957;309958;309959;309960;309961;309962;309963;309964;309965;309966;309967 309956 22 SIAACHNVGLLAHDGQVNEDGQPDLGK Unmodified 2814.3355 0.33550401 3763 Q96BR5 COA7 Cytochrome c oxidase assembly factor 7 yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 70.424 63.684 3;4 5.1005E-173 84690 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 155.56 149.19 81880000 77153000 0 4726400 0 0 0 0 0 0 0 0 0 0 0 0 46880 3763 42040 393018;393019;393020 309968;309969;309970 309969 3 SIAEEQYSDLEK Unmodified 1410.6515 0.65145464 455 O75116 ROCK2 Rho-associated protein kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 47.645 47.025 2 1.6949E-06 52139 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 123.79 88.568 195940000 0 82139000 0 0 7132500 12635000 5946900 3638900 5340700 13056000 11646000 17270000 8454100 6016100 22666000 46881 455 42041 393021;393022;393023;393024;393025;393026;393027;393028;393029;393030;393031;393032;393033;393034 309971;309972;309973;309974;309975;309976;309977;309978;309979;309980;309981 309975 11 SIAEGIGPEER Unmodified 1156.5724 0.57241646 1794 P57678 GEMIN4 Gem-associated protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 2 40.447 40.549 2 0.0085241 45375 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.436 28.655 10520000 0 0 0 0 0 5172000 0 5348000 0 0 0 0 0 0 0 46882 1794 42042 393035;393036;393037;393038;393039 309982;309983;309984;309985;309986 309982 5 SIAEGIGPEERR Unmodified 1312.6735 0.67352749 1794 P57678 GEMIN4 Gem-associated protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 32.656 32.948 3 0.00051945 35869 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 55.452 41.736 67687000 0 0 0 0 0 8289800 8476800 0 0 8746800 12034000 10261000 9691900 10187000 0 46883 1794 42043 393040;393041;393042;393043;393044;393045;393046;393047 309987;309988;309989;309990;309991;309992;309993 309990 7 SIAEVSQNLR Unmodified 1115.5935 0.59348625 3075 Q7Z2Z1 TICRR Treslin yes yes 0 0 0 By MS/MS 10 0 1 1 21.989 22.133 2 0.048137 22940 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 52.716 1.2708 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46884 3075 42044 393048 309994 309994 1 SIAFHSAVSLDPIK Unmodified 1483.8035 0.80347903 5167 Q9Y3F4 STRAP Serine-threonine kinase receptor-associated protein yes yes 0 0 0 By MS/MS 2 0 1 1 82.687 74.556 3 0.036853 97541 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 30.027 20.833 14372000 14372000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46885 5167 42045 393049 309995 309995 1 SIAHPEEISSNSQVR Unmodified 1652.8118 0.81181188 3283 Q8IYH5 ZZZ3 ZZ-type zinc finger-containing protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 2 2 1 1 2 1 1 33.455 33.462 2;3 1.6331E-06 36569 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 55.531 48.698 78342000 0 0 0 9833300 13408000 18903000 1726300 7342900 9312500 13140000 0 4676300 0 0 0 46886 3283 42046 393050;393051;393052;393053;393054;393055;393056;393057;393058;393059;393060 309996;309997;309998;309999;310000;310001;310002;310003;310004;310005;310006 309999 11 SIALDSEPK Unmodified 958.49713 0.49712625 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 33.284 33.447 2 0.010476 36698 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 64.265 33.035 67188000 0 0 0 0 0 10779000 7358400 7769000 7928800 11011000 0 0 11519000 10823000 0 46887 3023 42047 393061;393062;393063;393064;393065;393066;393067 310007;310008;310009;310010;310011 310009 5 SIANQIQEDWK Unmodified 1330.6517 0.65172941 2269 Q13315 ATM Serine-protein kinase ATM yes yes 0 0 0 By MS/MS 2 0 1 1 73.004 67.459 2 0.0049621 85282 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.257 71.31 41217000 0 41217000 0 0 0 0 0 0 0 0 0 0 0 0 0 46888 2269 42048 393068 310012 310012 1 SIAPSIFGGTDMK Unmodified 1322.654 0.6540376 1333 P33992 MCM5 DNA replication licensing factor MCM5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 77.341 76.21 2 7.1489E-18 94882 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.89 105.11 1008100000 126020000 754630000 16002000 3348200 4006100 9182100 3384300 4337700 5587400 7366100 12063000 10606000 6274700 13653000 31675000 46889 1333 42049 393069;393070;393071;393072;393073;393074;393075;393076;393077;393078;393079;393080;393081;393082;393083;393084 310013;310014;310015;310016;310017;310018;310019;310020;310021;310022;310023;310024;310025;310026;310027;310028 310016 15 SIAPSIFGGTDMK Oxidation (M) 1338.649 0.64895222 1333 P33992 MCM5 DNA replication licensing factor MCM5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 2 3 1 73.314 69.292 2 2.5706E-06 83772 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 104.79 78.281 750410000 88135000 635250000 27029000 0 0 0 0 0 0 0 0 0 0 0 0 46890 1333 42049 393085;393086;393087;393088;393089;393090 310029;310030;310031;310032;310033 310031 2005 5 SIAPSIFGGTDMKK Unmodified 1450.749 0.74900062 1333 P33992 MCM5 DNA replication licensing factor MCM5 yes yes 0 0 1 By MS/MS 2 0 1 1 75.716 67.585 3 0.0020835 89124 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.32 48.541 30810000 30810000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46891 1333 42050 393091 310034 310034 1 SIAQLIEK Unmodified 900.52803 0.52803245 3489 Q8TCG1 KIAA1524 Protein CIP2A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60.376 59.458 2 0.019504 67310 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 63.565 30.015 299280000 119510000 85105000 0 4193000 5815200 10703000 8287800 5635400 5905200 9449900 9666400 7830900 7871000 7568600 11741000 46892 3489 42051 393092;393093;393094;393095;393096;393097;393098;393099;393100;393101;393102;393103;393104;393105 310035;310036;310037;310038;310039;310040 310035 6 SIASADMDFNQLEAFLTAQTK Unmodified 2300.0995 0.099462633 3356 Q8N668 COMMD1 COMM domain-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 100.04 95.331 3 0.00097298 117859 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 27.928 13.767 17529000 0 17529000 0 0 0 0 0 0 0 0 0 0 0 0 0 46893 3356 42052 393106 310041 310041 1 SIASQTDGTLK Unmodified 1119.5772 0.57716749 4077 Q99996 AKAP9 A-kinase anchor protein 9 yes yes 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 27.779 28.058 2 0.016481 30372 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 44.318 11.055 11022000 0 0 0 0 0 0 4818900 0 0 0 3071700 0 3131000 0 0 46894 4077 42053 393107;393108;393109 310042 310042 1 SIATLAITTLLK Unmodified 1243.7751 0.77513901 5267;4839 Q9UBF2;Q9Y678 COPG2;COPG1 Coatomer subunit gamma-2;Coatomer subunit gamma-1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 95.74 95.858 2 0.0037911 111183 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.426 54.079 10624000 0 0 0 0 0 678510 0 0 0 2305100 986350 1243100 0 1365000 4046300 46895 4839;5267 42054 393110;393111;393112;393113;393114;393115 310043;310044 310044 2 SIAVAEAACPGITDK Unmodified 1501.7446 0.74464352 4811 Q9P289 STK26 Serine/threonine-protein kinase 26 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 57.474 56.605 2 1.0446E-30 64226 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 181.66 166.97 1571200000 0 1060200000 6273800 20751000 23055000 53856000 35177000 19242000 27775000 47059000 56515000 63792000 39420000 48079000 70018000 46896 4811 42055 393116;393117;393118;393119;393120;393121;393122;393123;393124;393125;393126;393127;393128;393129;393130 310045;310046;310047;310048;310049;310050;310051;310052;310053;310054;310055;310056;310057;310058;310059;310060;310061;310062;310063;310064 310061 20 SICEVLDLER Unmodified 1232.6071 0.60708741 1365 P35659 DEK Protein DEK yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 76.035 76.069 2 0.0043308 87819 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 73.233 44.084 48288000 0 0 0 1917900 4675900 4778200 2833100 0 5345000 5599400 0 9387500 3712300 4538700 5499600 46897 1365 42056 393131;393132;393133;393134;393135;393136;393137;393138;393139;393140 310065;310066;310067;310068;310069;310070 310066 6 SICEVLDLERSGVNSELVK Unmodified 2146.094 0.093983325 1365 P35659 DEK Protein DEK yes yes 0 0 1 By MS/MS 2 0 1 1 87.898 83.056 3 0.00081783 103304 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 36.679 27.264 28192000 0 28192000 0 0 0 0 0 0 0 0 0 0 0 0 0 46898 1365 42057 393141 310071 310071 1 SICREMSGDLEEGMLAVVK Unmodified 2123.0061 0.0060962949 1643 P50995 ANXA11 Annexin A11 yes yes 0 0 1 By MS/MS 2 0 1 1 90.51 82.38 3 0.00095211 106953 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 35.436 24.969 9285000 9285000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46899 1643 42058 393142 310072 310072 1 SIDAGPVDAWTLAFSPDSQYLATGTHVGK Unmodified 3003.4614 0.46141603 4304 Q9GZS3 WDR61 WD repeat-containing protein 61;WD repeat-containing protein 61, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 97.394 93.394 3 4.4922E-27 115858 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.611 70.892 86731000 0 77031000 9700500 0 0 0 0 0 0 0 0 0 0 0 0 46900 4304 42059 393143;393144;393145 310073;310074;310075;310076 310074 3 SIDDEDVDENEDDVYGNSSGRK Unmodified 2457.0052 0.0051641351 3517 Q8TEQ0;Q8IUI4 SNX29;SNX29P2 Sorting nexin-29;Putative protein SNX29P2 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.822 41.999 3 2.0583E-20 45940 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 86.546 82.108 70458000 0 0 0 3252100 3835100 5023700 4155600 7121900 3405500 5335500 6377500 10250000 5478200 7722600 8500600 46901 3517 42060 393146;393147;393148;393149;393150;393151;393152;393153;393154;393155;393156;393157 310077;310078;310079;310080;310081;310082;310083;310084;310085;310086 310082 10 SIDDEITEAK Unmodified 1119.5295 0.52954859 2238 Q13131 PRKAA1 5'-AMP-activated protein kinase catalytic subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 40.542 40.309 2 0.005932 43596 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 66.962 40.739 37379000 0 0 0 11239000 10297000 0 0 0 0 0 0 0 0 15843000 0 46902 2238 42061 393158;393159;393160 310087;310088;310089 310087 3 SIDDGELLHGILK Unmodified 1408.7562 0.75619449 589 O94822 LTN1 E3 ubiquitin-protein ligase listerin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 86.196 81.068 3 0.0049335 103216 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.967 44.834 38691000 7429700 30192000 1069600 0 0 0 0 0 0 0 0 0 0 0 0 46903 589 42062 393161;393162;393163 310090;310091 310091 2 SIDDLEDELYAQK Unmodified 1537.7148 0.71478318 884 P09493 TPM1 Tropomyosin alpha-1 chain yes yes 0 0 0 By MS/MS 2 0 2 2 75.546 70.282 2;3 8.6628E-06 93515 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.88 77.973 114530000 0 114530000 0 0 0 0 0 0 0 0 0 0 0 0 0 46904 884 42063 393164;393165 310092;310093 310093 2 SIDDTSNFDDFPESDILQPVPNTTEPDYK Unmodified 3298.4677 0.46774278 5101 Q9Y2H1 STK38L Serine/threonine-protein kinase 38-like yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 91.738 87.676 3 5.0431E-09 108728 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 63.042 56.815 20055000 0 20055000 0 0 0 0 0 0 0 0 0 0 0 0 0 46905 5101 42064 393166;393167 310094 310094 1 SIDDTSNFDEFPESDILKPTVATSNHPETDYK Unmodified 3611.6427 0.64274703 2507 Q15208 STK38 Serine/threonine-protein kinase 38 yes yes 0 0 1 By MS/MS 2 0 1 1 84.435 81.992 4 0.010393 99248 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 23.983 21.813 10310000 0 0 10310000 0 0 0 0 0 0 0 0 0 0 0 0 46906 2507 42065 393168 310095 310095 1 SIDELNSAWDSLNK Unmodified 1590.7526 0.75256567 2086 Q03001 DST Dystonin yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 84.825 78.4 2 4.593E-30 97727 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 173.71 138.99 22513000 2450800 20062000 0 0 0 0 0 0 0 0 0 0 0 0 0 46907 2086 42066 393169;393170 310096 310096 1 SIDEMNNAWENLNK Unmodified 1676.7464 0.74643444 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS 2 0 1 1 77.557 72.782 2 2.5483E-76 90754 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 206.97 193.88 46510000 0 46510000 0 0 0 0 0 0 0 0 0 0 0 0 0 46908 5049 42067 393171 310097 310097 1 SIDEMNNAWENLNK Oxidation (M) 1692.7413 0.74134906 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 1 0 By MS/MS 2 0 1 1 63.223 57.33 2 0.0043228 73576 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.847 58.615 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46909 5049 42067 393172 310098 310098 6398 1 SIDFPLTK Unmodified 919.50148 0.50148335 550 O75844 ZMPSTE24 CAAX prenyl protease 1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69.122 68.243 2 0.0068357 78088 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 94.662 59.169 183520000 4683100 23911000 0 9619500 10032000 10129000 11964000 10543000 9334800 15870000 13329000 19739000 16799000 15145000 12425000 46910 550 42068 393173;393174;393175;393176;393177;393178;393179;393180;393181;393182;393183;393184;393185;393186 310099;310100;310101;310102;310103;310104;310105;310106;310107 310104 8 SIDGTADDEDEGVPTDQAIR Unmodified 2102.924 0.92400069 4633 Q9NTI5 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 53.709 54.079 2 7.0372E-11 61247 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 103.85 93.527 40415000 0 0 0 0 0 6179000 0 0 0 8018500 6846100 6248900 4376700 0 8746200 46911 4633 42069 393187;393188;393189;393190;393191;393192;393193 310108;310109;310110;310111;310112;310113;310114 310111 7 SIDGTADDEDEGVPTDQAIRAGLELLK Unmodified 2827.3723 0.37232625 4633 Q9NTI5 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes yes 0 0 1 By MS/MS 2 0 1 1 96.675 88.544 3 9.2209E-34 114366 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.679 76.704 66132000 66132000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46912 4633 42070 393194 310115 310115 1 SIDISATIPK Unmodified 1043.5863 0.58627561 2467 Q15003 NCAPH Condensin complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 67.726 67.345 2 0.021082 85402 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.04 30.244 120320000 0 16904000 0 0 0 10522000 8380200 7064500 6398200 14277000 15542000 0 9582700 11891000 19758000 46913 2467 42071 393195;393196;393197;393198;393199;393200;393201;393202;393203;393204 310116;310117;310118 310116 3 SIDLIQK Unmodified 815.47527 0.4752686 1577 P49585 PCYT1A Choline-phosphate cytidylyltransferase A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 2 1 2 1 1 1 2 2 2 1 1 2 36.856 37.07 2 0.023359 49390 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 89.427 23.289 420420000 0 0 0 45009000 16566000 41397000 19079000 23383000 16585000 49282000 45160000 48705000 31440000 28334000 55485000 46914 1577 42072 393205;393206;393207;393208;393209;393210;393211;393212;393213;393214;393215;393216;393217;393218;393219;393220;393221;393222 310119;310120;310121;310122;310123;310124;310125;310126;310127;310128;310129;310130;310131;310132;310133 310128 15 SIDLPIQSSLCR Unmodified 1387.7129 0.71294946 686 O95757 HSPA4L Heat shock 70 kDa protein 4L yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 77.971 78.145 2 0.0013253 89794 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.693 61.021 64097000 0 0 0 0 0 0 0 0 4107000 6031100 10012000 11645000 0 8720100 23582000 46915 686 42073 393223;393224;393225;393226;393227;393228 310134;310135 310134 1 SIDLQEPLQK Unmodified 1169.6292 0.62920306 5075 Q9Y223 GNE Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase;UDP-N-acetylglucosamine 2-epimerase (hydrolyzing);N-acetylmannosamine kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 4 3.46 3 1 1 1 1 1 61.792 57.451 2 0.001821 65102 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.027 54.998 286990000 5693600 267240000 958960 0 0 0 0 0 0 0 0 0 0 0 13095000 46916 5075 42074 393229;393230;393231;393232 310136;310137;310138;310139 310137 3 SIDMSWDSVTMK 2 Oxidation (M) 1430.6058 0.60576678 4912 Q9UHX1 PUF60 Poly(U)-binding-splicing factor PUF60 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.74 2 1 17 3 2 2 1 1 1 1 1 2 2 2 1 1 57.182 56.43 2 0.0001834 64022 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 77.662 71.627 393210000 0 185160000 0 17408000 21949000 11916000 12503000 11117000 10672000 14677000 22886000 27254000 34385000 15178000 8106900 46917 4912 42075 393233;393234;393235;393236;393237;393238;393239;393240;393241;393242;393243;393244;393245;393246;393247;393248;393249;393250;393251;393252 310140;310141;310142;310143;310144;310145;310146;310147;310148;310149;310150;310151;310152;310153;310154;310155;310156;310157;310158 310152 6270;6271 19 SIDMSWDSVTMK Oxidation (M) 1414.6109 0.61085216 4912 Q9UHX1 PUF60 Poly(U)-binding-splicing factor PUF60 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.77 4 1 29 1 3 1 1 2 2 2 3 2 3 3 3 3 2 3 70.368 69.706 2 1.6389E-05 82881 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 93.058 88.362 660160000 9070100 284460000 1766700 8749100 12344000 22556000 20979000 37208000 13064000 39226000 35928000 47239000 34528000 30966000 62070000 46918 4912 42075 393253;393254;393255;393256;393257;393258;393259;393260;393261;393262;393263;393264;393265;393266;393267;393268;393269;393270;393271;393272;393273;393274;393275;393276;393277;393278;393279;393280;393281;393282;393283;393284;393285;393286 310159;310160;310161;310162;310163;310164;310165;310166;310167;310168;310169;310170;310171;310172;310173;310174;310175;310176;310177;310178;310179;310180;310181;310182;310183;310184;310185;310186;310187;310188;310189;310190;310191;310192;310193 310165 6270;6271 33 SIDMSWDSVTMK Unmodified 1398.6159 0.61593753 4912 Q9UHX1 PUF60 Poly(U)-binding-splicing factor PUF60 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 79.501 78.333 2 1.1016E-06 96693 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.94 88.076 275920000 7855700 51579000 1390900 0 7888100 17841000 10636000 16917000 12485000 22910000 19874000 15888000 12675000 19116000 58861000 46919 4912 42075 393287;393288;393289;393290;393291;393292;393293;393294;393295;393296;393297;393298;393299;393300;393301 310194;310195;310196;310197;310198;310199;310200;310201;310202;310203;310204;310205;310206;310207;310208;310209 310198 16 SIDPDSIQSALLASGLGSK Unmodified 1857.9684 0.96837211 17 A3KN83 SBNO1 Protein strawberry notch homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 91.123 90.54 2 1.2263E-30 111604 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145.52 129.27 103480000 0 67674000 0 0 1636000 2009400 1825800 2175600 2124100 6234300 3924100 3621900 0 3125200 9131100 46920 17 42076 393302;393303;393304;393305;393306;393307;393308;393309;393310;393311;393312;393313 310210;310211;310212;310213;310214;310215;310216;310217;310218;310219;310220;310221;310222;310223 310213 14 SIDQDYER Unmodified 1024.4462 0.44615331 4867 Q9UDY2 TJP2 Tight junction protein ZO-2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 20.739 20.92 2 0.016586 21487 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 67.032 56.159 45636000 0 0 0 0 3992600 4743000 4404900 4705400 3626500 6785400 6939400 0 0 4587400 5851800 46921 4867 42077 393314;393315;393316;393317;393318;393319;393320;393321;393322 310224;310225;310226 310225 3 SIDRSMENNK Unmodified 1192.5506 0.55063516 3194 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 11.718 8.9528 2 0.046214 11722 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 79.906 50.163 8600400 0 4088800 4511600 0 0 0 0 0 0 0 0 0 0 0 0 46922 3194 42078 393323;393324 310227 310227 1 SIDSFGQVSHPK Unmodified 1300.6412 0.64116473 3201 Q86XZ4 SPATS2 Spermatogenesis-associated serine-rich protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 38.469 38.332 2;3 0.0007084 41222 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.6 46.553 92323000 0 0 3921900 4618300 3728200 5062400 6491900 6685100 0 7192500 10912000 10091000 11312000 8580100 13727000 46923 3201 42079 393325;393326;393327;393328;393329;393330;393331;393332;393333;393334;393335;393336 310228;310229;310230;310231;310232;310233;310234;310235;310236;310237;310238 310231 11 SIDSNPYDTDK Unmodified 1253.5412 0.54117591 1504 P46459 NSF Vesicle-fusing ATPase yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 27.62 27.838 2 0.0096127 30112 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 61.161 41.375 7910300 0 0 0 3342600 0 0 0 0 0 0 0 0 0 0 4567700 46924 1504 42080 393337;393338 310239 310239 1 SIDTFFGVK Unmodified 1012.5229 0.52294707 2794 Q5TBB1 RNASEH2B Ribonuclease H2 subunit B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 77.837 77.298 2 0.005606 89245 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 77.282 61.129 183410000 0 127740000 20974000 0 0 4180900 2461000 0 1561800 4566300 3846900 3992600 3250700 2724100 8114500 46925 2794 42081 393339;393340;393341;393342;393343;393344;393345;393346;393347;393348;393349 310240;310241;310242;310243;310244;310245;310246;310247;310248 310240 9 SIDTGMGLER Unmodified 1077.5125 0.51245874 1578 P49588 AARS Alanine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 45.284 45.48 2 0.005999 50951 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 66.692 20.266 205010000 0 0 0 8879900 0 16890000 0 0 6238400 16128000 27681000 0 12304000 22921000 93966000 46926 1578 42082 393350;393351;393352;393353;393354;393355;393356;393357 310249;310250;310251;310252;310253;310254;310255 310250 7 SIDTGMGLER Oxidation (M) 1093.5074 0.50737336 1578 P49588 AARS Alanine--tRNA ligase, cytoplasmic yes yes 0 1 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS 10 0 8 1 2 1 1 1 1 1 29.172 29.468 2 0.0024658 30422 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 75.378 45.303 90639000 0 0 0 0 0 10026000 4622100 3567000 0 9693200 0 13142000 0 17913000 31676000 46927 1578 42082 393358;393359;393360;393361;393362;393363;393364;393365 310256;310257 310257 2541 2 SIDTQTPGGADRGSNNSSR Unmodified 1918.8729 0.87290859 2918 Q6P1L5 FAM117B Protein FAM117B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 2 1 1 1 2 1 15.514 15.854 3 2.9393E-05 15489 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 63.337 59.369 26396000 0 0 0 0 0 0 0 0 3854300 0 5537900 7178700 0 4789200 5036400 46928 2918 42083 393366;393367;393368;393369;393370;393371;393372;393373 310258;310259;310260;310261;310262;310263 310263 6 SIDTQTPSVQER Unmodified 1359.663 0.66302238 3171 Q86VQ1 GLCCI1 Glucocorticoid-induced transcript 1 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.26 33.444 2 7.426E-11 37110 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 161.17 108.46 150960000 0 0 0 9105500 8534400 11845000 10982000 9799900 9504900 12574000 18543000 15567000 13548000 12878000 18078000 46929 3171 42084 393374;393375;393376;393377;393378;393379;393380;393381;393382;393383;393384;393385 310264;310265;310266;310267;310268;310269;310270;310271;310272;310273;310274;310275 310274 12 SIEASVDVSAPK Unmodified 1201.619 0.6190323 3226 Q8IVF2 AHNAK2 Protein AHNAK2 yes no 0 0 0 By MS/MS 2 0 1 1 53.328 47.536 2 0.015217 61647 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.743 38.605 21611000 0 21611000 0 0 0 0 0 0 0 0 0 0 0 0 0 46930 3226 42085 393386 310276 310276 1 SIEASVDVSEPK Unmodified 1259.6245 0.62451161 3226 Q8IVF2 AHNAK2 Protein AHNAK2 yes yes 0 0 0 By MS/MS 2 0 1 1 50.898 45.152 2 0.0030973 58756 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.865 34.262 8386000 0 8386000 0 0 0 0 0 0 0 0 0 0 0 0 0 46931 3226 42086 393387 310277 310277 1 SIEASVHVSAPK Unmodified 1223.651 0.65100113 3226 Q8IVF2 AHNAK2 Protein AHNAK2 yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 46.673 41.984 3 0.027101 55125 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 36.847 14.854 16591000 0 13509000 3081100 0 0 0 0 0 0 0 0 0 0 0 0 46932 3226 42087 393388;393389 310278 310278 1 SIEAVHEDIR Unmodified 1167.5884 0.58840088 1170 P23919 DTYMK Thymidylate kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 2 1 1 2 1 1 1 1 1 2 32.836 33.04 2;3 0.0006183 36530 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 105.2 81.04 421480000 0 0 0 10824000 9636000 90163000 12787000 12378000 57894000 20200000 22385000 18684000 13220000 14643000 138660000 46933 1170 42088 393390;393391;393392;393393;393394;393395;393396;393397;393398;393399;393400;393401;393402;393403;393404 310279;310280;310281;310282;310283;310284;310285;310286;310287;310288;310289;310290;310291;310292;310293 310293 12 SIEAVHEDIRVLSEDAIRTATEK Unmodified 2581.3348 0.33475896 1170 P23919 DTYMK Thymidylate kinase yes yes 0 0 2 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 90.067 84.396 4 8.8204E-05 108106 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.684 59.922 43916000 36174000 7741500 0 0 0 0 0 0 0 0 0 0 0 0 0 46934 1170 42089 393405;393406 310294;310295 310295 2 SIEDFAHSSFQMALSK Oxidation (M) 1812.8352 0.83524944 552 O75874 IDH1 Isocitrate dehydrogenase [NADP] cytoplasmic yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 81.871 78.255 3 0.0016272 97488 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 54.281 36.48 44001000 0 38074000 5927900 0 0 0 0 0 0 0 0 0 0 0 0 46935 552 42090 393407;393408 310296 310296 719 1 SIEDFAHSSFQMALSK Unmodified 1796.8403 0.84033482 552 O75874 IDH1 Isocitrate dehydrogenase [NADP] cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 87.596 82.198 3 9.1428E-08 104384 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.378 76.096 188050000 83553000 104500000 0 0 0 0 0 0 0 0 0 0 0 0 0 46936 552 42090 393409;393410;393411 310297;310298 310298 1 SIEDMTEEAFQK Oxidation (M) 1442.6235 0.62352533 1006 P14735 IDE Insulin-degrading enzyme yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 4.12 3.41 5 1 2 2 3 1 2 53.596 49.329 2 5.1157E-25 61597 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 178.55 140.46 462240000 9933900 380120000 2497700 69687000 0 0 0 0 0 0 0 0 0 0 0 46937 1006 42091 393412;393413;393414;393415;393416;393417;393418;393419 310299;310300;310301;310302;310303;310304;310305;310306;310307 310299 1377 9 SIEDMTEEAFQK Unmodified 1426.6286 0.62861071 1006 P14735 IDE Insulin-degrading enzyme yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.9 3.81 3 1 6 1 2 1 1 1 1 1 1 1 71.624 69.805 2 1.3155E-09 88851 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 122.96 102.09 878590000 33883000 793290000 0 18151000 0 0 0 2930100 0 0 7418900 5264700 0 2899400 14757000 46938 1006 42091 393420;393421;393422;393423;393424;393425;393426;393427;393428;393429 310308;310309;310310;310311;310312;310313;310314;310315;310316;310317 310311 9 SIEDMTVK Oxidation (M) 937.44265 0.44264784 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 21.726 17.841 2 0.02205 23486 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.229 23.182 43610000 0 43610000 0 0 0 0 0 0 0 0 0 0 0 0 0 46939 1286 42092 393430;393431 310318 310318 1 SIEDMTVK Unmodified 921.44773 0.44773322 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 37.211 37.357 2 0.015996 41910 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 67.981 9.0636 55101000 0 0 0 5924400 6916600 0 0 0 5057200 0 8722200 0 7414200 6629400 14437000 46940 1286 42092 393432;393433;393434;393435;393436;393437;393438 310319;310320;310321;310322;310323 310323 5 SIEEGDGAFGR Unmodified 1136.5098 0.5098162 497 O75420 GIGYF1 PERQ amino acid-rich with GYF domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 36.039 36.2 2 0.0054841 40737 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 74.92 38.363 85107000 0 0 0 0 17429000 0 0 0 0 13563000 11424000 0 21270000 21421000 0 46941 497 42093 393439;393440;393441;393442;393443;393444;393445 310324;310325;310326 310325 3 SIEEIVR Unmodified 844.46543 0.46543219 1405 P39748 FEN1 Flap endonuclease 1 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 42.162 42.522 2 0.029815 45968 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.311 12.596 178230000 0 0 0 0 0 0 1592600 0 0 0 0 0 0 58211000 118420000 46942 1405 42094 393446;393447;393448 310327;310328 310327 2 SIEEQLGTEIKPIPSNIDK Unmodified 2110.1158 0.11576462 1199 P26196 DDX6 Probable ATP-dependent RNA helicase DDX6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.2 3.82 3 2 5 1 4 1 1 1 1 1 78.243 75.888 2;3 2.287E-86 94752 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 224.97 204.86 684950000 19066000 543610000 0 0 0 0 14953000 30779000 20791000 0 0 0 25500000 30251000 0 46943 1199 42095 393449;393450;393451;393452;393453;393454;393455;393456;393457;393458 310329;310330;310331;310332;310333;310334;310335;310336;310337;310338;310339 310329 7 SIEEVEADMK Oxidation (M) 1165.5173 0.51726935 434 O60826 CCDC22 Coiled-coil domain-containing protein 22 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 26.66 26.819 2 0.0015839 28233 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 83.948 66.039 27328000 0 0 0 0 2370700 4902400 4073500 0 2446000 3998500 3413100 6124400 0 0 0 46944 434 42096 393459;393460;393461;393462;393463;393464;393465 310340;310341;310342;310343 310342 557 4 SIEEVEADMK Unmodified 1149.5224 0.52235473 434 O60826 CCDC22 Coiled-coil domain-containing protein 22 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 47.262 47.437 2 0.010781 53624 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 64.04 41.954 53469000 0 0 0 2006500 3097800 3361900 0 4369600 3148200 5900700 7450700 6641300 4523000 3485500 9484000 46945 434 42096 393466;393467;393468;393469;393470;393471;393472;393473;393474;393475;393476 310344;310345;310346;310347;310348;310349;310350;310351;310352;310353;310354 310344 11 SIEEVLR Unmodified 844.46543 0.46543219 3742 Q96AX1 VPS33A Vacuolar protein sorting-associated protein 33A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 42.354 42.536 2 0.02333 46740 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 90.986 7.6087 566190000 0 0 0 0 28233000 94804000 61289000 45556000 29181000 92283000 72197000 78091000 64556000 0 0 46946 3742 42097 393477;393478;393479;393480;393481;393482;393483;393484;393485 310355;310356;310357;310358;310359;310360;310361;310362;310363 310362 9 SIEGTADDEEEGVSPDTAIR Unmodified 2089.9288 0.92875172 2647 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.208 56.333 2 4.8849E-53 63855 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 148.91 140.18 229200000 0 0 0 10901000 12031000 16760000 17119000 17878000 9853200 24491000 26038000 25322000 16599000 18845000 33362000 46947 2647 42098 393486;393487;393488;393489;393490;393491;393492;393493;393494;393495;393496;393497 310364;310365;310366;310367;310368;310369;310370;310371;310372;310373;310374;310375;310376 310369 13 SIEGTADDEEEGVSPDTAIRSGLELLK Unmodified 2830.372 0.3719919 2647 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 93.871 88.711 3 2.1837E-07 111566 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.92 47.917 112350000 77015000 30267000 5068300 0 0 0 0 0 0 0 0 0 0 0 0 46948 2647 42099 393498;393499;393500 310377;310378;310379;310380 310377 3 SIEIPRPVDGVEVPGCGK Unmodified 1907.9775 0.977497 1202 P26368 U2AF2 Splicing factor U2AF 65 kDa subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.54 3 3 2 21 1 3 1 2 2 1 1 2 1 2 2 2 2 2 2 75.891 75.076 2;3 1.3213E-19 91454 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 115.34 98.261 1534200000 26471000 431380000 87714000 44467000 54429000 5664500 3997500 74023000 6052000 114040000 114120000 172450000 109280000 100930000 189210000 46949 1202 42100 393501;393502;393503;393504;393505;393506;393507;393508;393509;393510;393511;393512;393513;393514;393515;393516;393517;393518;393519;393520;393521;393522;393523;393524;393525;393526 310381;310382;310383;310384;310385;310386;310387;310388;310389;310390;310391;310392;310393;310394;310395;310396;310397;310398;310399;310400;310401;310402 310396 22 SIELFYK Unmodified 898.48002 0.48001963 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69 68.268 2 0.036349 85049 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 83.614 40.614 781520000 124140000 0 81509000 22427000 25229000 49808000 32886000 35505000 31589000 46095000 52117000 71195000 49634000 58632000 100760000 46950 1986 42101 393527;393528;393529;393530;393531;393532;393533;393534;393535;393536;393537;393538;393539;393540 310403;310404;310405 310405 3 SIELNDQK Unmodified 945.47673 0.47672516 2820 Q5VVJ2 MYSM1 Histone H2A deubiquitinase MYSM1 yes yes 0 0 0 By MS/MS 2 0 1 1 21.809 17.926 2 0.043064 23719 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.383 27.731 67300000 0 67300000 0 0 0 0 0 0 0 0 0 0 0 0 0 46951 2820 42102 393541 310406 310406 1 SIEQDAVNTFTK Unmodified 1351.662 0.66195975 342 O43572 AKAP10 A-kinase anchor protein 10, mitochondrial yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 66.078 65.413 2 1.0924E-12 83164 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 150.61 127.18 149760000 0 79363000 1277100 0 3120200 6167500 7275000 0 4338200 8712200 6177900 9698400 6465600 5299600 11861000 46952 342 42103 393542;393543;393544;393545;393546;393547;393548;393549;393550;393551;393552;393553;393554 310407;310408;310409;310410;310411;310412;310413;310414;310415;310416;310417;310418;310419;310420;310421;310422;310423 310413 17 SIETLLEAAR Acetyl (Protein N-term) 1143.6136 0.61355299 4028 Q99583 MNT Max-binding protein MNT yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 95.918 96.025 2 0.00017509 111466 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 133.23 75.954 20030000 0 0 0 0 1437100 1202000 1386200 1452300 1261500 2718400 1662400 0 1427500 2548200 4935000 46953 4028 42104 393555;393556;393557;393558;393559;393560;393561;393562;393563;393564 310424;310425;310426;310427;310428;310429;310430;310431;310432;310433;310434 310427 11 SIEVENDFLPVEK Unmodified 1517.7613 0.76133944 3754 Q96B97 SH3KBP1 SH3 domain-containing kinase-binding protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 83.805 79.085 2 0.0075583 98375 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.014 57.485 19487000 0 19487000 0 0 0 0 0 0 0 0 0 0 0 0 0 46954 3754 42105 393565 310435 310435 1 SIEVIENR Unmodified 958.50836 0.50835964 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 37.722 36.977 2 0.0044025 41141 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 130.77 58.627 1028800000 0 308910000 16400000 35458000 29227000 29244000 35700000 37367000 28794000 48255000 88338000 83237000 57095000 62804000 168020000 46955 1564 42106 393566;393567;393568;393569;393570;393571;393572;393573;393574;393575;393576;393577;393578;393579;393580 310436;310437;310438;310439;310440;310441;310442;310443;310444;310445;310446;310447;310448;310449;310450;310451;310452 310450 15 SIEVIENRMAVLNEQVK Unmodified 1971.0459 0.04591092 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 82.451 76.578 2;3 1.5257E-87 98326 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 189.1 155.69 412830000 385560000 24318000 2957900 0 0 0 0 0 0 0 0 0 0 0 0 46956 1564 42107 393581;393582;393583;393584 310453;310454;310455 310455 2 SIEVIENRMAVLNEQVK Oxidation (M) 1987.0408 0.040825542 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 69.89 63.909 3 0.00040701 84674 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.337 48.642 166910000 157110000 0 9799800 0 0 0 0 0 0 0 0 0 0 0 0 46957 1564 42107 393585;393586 310456 310456 2486 1 SIEVYSAYNNVK Unmodified 1385.6827 0.68269519 3983 Q96S55 WRNIP1 ATPase WRNIP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 57.353 56.382 2 2.1788E-15 72109 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 174.41 154.57 227610000 0 122780000 2688300 4422400 4329400 9889800 8103200 5542000 5684500 10056000 13235000 0 12126000 8821000 19940000 46958 3983 42108 393587;393588;393589;393590;393591;393592;393593;393594;393595;393596;393597;393598;393599;393600;393601 310457;310458;310459;310460;310461;310462;310463;310464;310465;310466;310467;310468;310469;310470;310471 310461 15 SIEYLEEDAQK Unmodified 1323.6194 0.61942623 3915 Q96L91 EP400 E1A-binding protein p400 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 50.997 49.043 2 3.4994E-05 62815 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 144.5 130.38 72494000 0 38490000 0 0 0 0 0 7893400 0 0 13321000 0 12789000 0 0 46959 3915 42109 393602;393603;393604;393605;393606;393607;393608;393609;393610 310472;310473;310474;310475;310476;310477;310478;310479 310473 8 SIFANVEAK Unmodified 977.5182 0.51819605 2652 Q2M389 KIAA1033 WASH complex subunit 7 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 50.939 51.206 2 0.038908 57650 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 44.753 17.869 247140000 0 0 0 0 0 58010000 0 8025500 36065000 0 0 90605000 0 54438000 0 46960 2652 42110 393611;393612;393613;393614;393615 310480 310480 1 SIFDYALR Unmodified 983.50763 0.50763136 4024 Q99570 PIK3R4 Phosphoinositide 3-kinase regulatory subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.448 79.508 2 0.0099306 91957 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 81.297 39.795 73729000 0 0 0 2947300 2739000 7754200 3335200 5319700 4001400 5385200 6652600 8059000 6954000 7663500 12917000 46961 4024 42111 393616;393617;393618;393619;393620;393621;393622;393623;393624;393625;393626;393627 310481;310482;310483;310484;310485;310486;310487;310488;310489 310482 9 SIFETYMSK Unmodified 1104.5161 0.51614714 3281 Q8IYB7 DIS3L2 DIS3-like exonuclease 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 73.57 67.863 2 0.025012 89038 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.856 28.46 37023000 32817000 0 4206300 0 0 0 0 0 0 0 0 0 0 0 0 46962 3281 42112 393628;393629 310490 310490 1 SIFGNAVSR Unmodified 949.49813 0.49812931 1418 P40692 MLH1 DNA mismatch repair protein Mlh1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 47.794 47.905 2 0.014158 53733 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 58.716 32.544 349270000 0 0 0 21265000 21199000 31167000 28624000 27051000 17428000 43774000 36080000 49534000 39564000 33580000 0 46963 1418 42113 393630;393631;393632;393633;393634;393635;393636;393637;393638;393639;393640 310491;310492;310493 310492 3 SIFQHIQSAQSQR Unmodified 1528.7746 0.77463852 5122 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 2 1 2 1 2 1 2 1 2 2 2 46.386 46.567 2;3 6.8423E-08 52288 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 99.5 74.114 255390000 0 0 0 6621100 8621300 16715000 15848000 8040900 17877000 14244000 30990000 21632000 47551000 27399000 39851000 46964 5122 42114 393641;393642;393643;393644;393645;393646;393647;393648;393649;393650;393651;393652;393653;393654;393655;393656;393657;393658;393659 310494;310495;310496;310497;310498;310499;310500;310501;310502;310503;310504;310505;310506;310507;310508;310509 310501 14 SIFSLDTPEQYQEAFQK Unmodified 2029.9633 0.96328673 3518 Q8TEQ6 GEMIN5 Gem-associated protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.57 3.85 3 1 3 3 1 1 1 1 88.563 86.419 2;3 2.221E-52 107201 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145.29 127.1 132820000 0 114340000 3403200 0 0 0 0 0 0 4093200 3062600 0 0 0 7915700 46965 3518 42115 393660;393661;393662;393663;393664;393665;393666 310510;310511;310512;310513;310514;310515 310511 6 SIFSSEK Unmodified 796.39668 0.39668393 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.42 1.93 1 11 1 1 1 1 1 1 1 1 1 1 1 1 27.497 27.268 2 0.045032 34413 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 78.616 24.906 90274000 0 8162600 0 5371400 5442000 5597700 6533100 6201600 5318300 8350900 7069300 11647000 11771000 8808500 0 46966 1601 42116 393667;393668;393669;393670;393671;393672;393673;393674;393675;393676;393677;393678 310516;310517 310517 2 SIFTPTNQIR Acetyl (Protein N-term) 1217.6404 0.64043645 5146 Q9Y3A5 SBDS Ribosome maturation protein SBDS yes yes 1 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.145 79.205 2 0.0030315 91033 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.859 23.77 211890000 0 0 0 12005000 11779000 16604000 16299000 14878000 11689000 22339000 20148000 21697000 12602000 14064000 37790000 46967 5146 42117 393679;393680;393681;393682;393683;393684;393685;393686;393687;393688;393689;393690 310518;310519;310520 310518 3 SIFVLPNDDLK Unmodified 1259.6762 0.67615325 2195 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 82.045 81.882 2 0.0033881 94847 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 96.331 74.245 6389200 0 0 0 2845600 0 0 0 0 0 0 0 0 3543600 0 0 46968 2195 42118 393691;393692;393693;393694;393695;393696;393697;393698 310521;310522;310523;310524;310525;310526;310527 310527 7 SIFVLPNDDLKK Unmodified 1387.7711 0.77111627 2195 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF yes yes 0 0 1 By MS/MS 2 0 1 1 81.124 72.993 3 0.024522 95743 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 26.703 19.545 7068100 7068100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46969 2195 42119 393699 310528 310528 1 SIFYVPDMK Unmodified 1098.542 0.54196796 2210 Q12931 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 0 0 0 By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.947 79.005 2 0.012192 90891 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.679 47.01 61982000 0 0 0 1606800 1847000 7466700 2020000 4809100 4972500 5366400 5818500 4821300 4379100 5786900 13087000 46970 2210 42120 393700;393701;393702;393703;393704;393705;393706;393707;393708;393709;393710;393711 310529;310530;310531;310532 310529 4 SIGASPNPFSVHTATAVPSGK Unmodified 2024.0327 0.032703697 895 P09884 POLA1 DNA polymerase alpha catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 66.308 66.438 3 0.029494 76012 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 22.24 12.183 39410000 0 0 0 0 4079500 5308300 0 0 2981300 5046200 0 9540700 0 4502400 7951700 46971 895 42121 393712;393713;393714;393715;393716;393717;393718 310533;310534 310534 2 SIGATLTDVDDLIFK Unmodified 1606.8454 0.84540342 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By MS/MS By MS/MS 2.67 0.471 1 2 2 1 97.717 92.733 2 1.8627E-30 116465 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 128.85 108.54 16894000 12666000 4228400 0 0 0 0 0 0 0 0 0 0 0 0 0 46972 3023 42122 393719;393720;393721 310535;310536 310536 2 SIGDIFLK Unmodified 891.50657 0.50656873 4455 Q9H8V3 ECT2 Protein ECT2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 77.588 77.633 2 0.030437 89591 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.531 21.98 174150000 0 0 0 11444000 10963000 15568000 13987000 14330000 10133000 20036000 0 20486000 19189000 13443000 24572000 46973 4455 42123 393722;393723;393724;393725;393726;393727;393728;393729;393730;393731;393732 310537;310538 310538 2 SIGDLGAR Unmodified 787.41882 0.41881635 4172 Q9BV20 MRI1 Methylthioribose-1-phosphate isomerase yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 28.256 28.873 2 0.016392 30807 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 67.344 3.781 84452000 0 0 0 0 0 0 0 0 0 0 22712000 26255000 0 0 35485000 46974 4172 42124 393733;393734;393735 310539 310539 1 SIGESVPEPRIIM Oxidation (M) 1442.7439 0.74391524 5243 Q9Y5P6 GMPPB Mannose-1-phosphate guanyltransferase beta yes yes 0 1 1 By MS/MS 2 0 1 1 76.663 71.826 2 1.3655E-06 89702 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.39 91.607 81750000 0 81750000 0 0 0 0 0 0 0 0 0 0 0 0 0 46975 5243 42125 393736 310540 310540 6644 0 SIGESVPEPRIIM Unmodified 1426.749 0.74900062 5243 Q9Y5P6 GMPPB Mannose-1-phosphate guanyltransferase beta yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 84.038 80.435 2 0.040003 97298 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 64.297 45.517 147890000 0 141700000 6182100 0 0 0 0 0 0 0 0 0 0 0 0 46976 5243 42125 393737;393738 310541 310541 1 SIGEYDVLR Unmodified 1050.5346 0.53457439 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 59.781 59.782 2 0.0033037 67373 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 93.374 63.189 584160000 0 0 0 52946000 44120000 0 63478000 53235000 0 79867000 111730000 0 88863000 89921000 0 46977 1986 42126 393739;393740;393741;393742;393743;393744;393745;393746 310542;310543;310544;310545;310546;310547;310548;310549;310550 310547 9 SIGNLTQLQTLNVK Unmodified 1527.8621 0.86205654 2979 Q6UWE0 LRSAM1 E3 ubiquitin-protein ligase LRSAM1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.909 78.967 2 0.00041704 90517 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 71.085 62.503 69634000 0 0 0 2238200 3162600 6314900 4647100 4722600 3917400 8724200 8646700 7337200 4004000 5341000 10578000 46978 2979 42127 393747;393748;393749;393750;393751;393752;393753;393754;393755;393756;393757;393758 310551;310552;310553;310554;310555;310556;310557;310558;310559;310560 310556 10 SIGSAVDQGNESIVAK Unmodified 1573.7948 0.79476484 4329 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.994 49.153 2 9.6541E-29 55513 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 174.9 150.06 775630000 0 0 0 51773000 51268000 56916000 52829000 51236000 64055000 66900000 85808000 97189000 71196000 58701000 67763000 46979 4329 42128 393759;393760;393761;393762;393763;393764;393765;393766;393767;393768;393769;393770 310561;310562;310563;310564;310565;310566;310567;310568;310569;310570;310571;310572 310567 12 SIGSPESTPK Unmodified 1001.5029 0.50293991 3432 Q8NEY1 NAV1 Neuron navigator 1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.53 1.88 1 16 1 1 1 1 2 2 2 1 1 2 2 1 18.755 18.717 2 0.0090337 18957 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 58.596 18.328 246710000 0 21250000 0 10596000 11624000 10288000 23850000 0 21521000 27315000 23804000 21478000 28687000 22035000 24260000 46980 3432 42129 393771;393772;393773;393774;393775;393776;393777;393778;393779;393780;393781;393782;393783;393784;393785;393786;393787 310573;310574;310575;310576;310577;310578;310579;310580;310581;310582 310576 10 SIGTANRPMGAGEALRR Unmodified 1755.9162 0.91623415 2207 Q12906 ILF3 Interleukin enhancer-binding factor 3 yes yes 0 0 2 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 34.801 35.006 3 0.01389 37293 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 31.895 14.956 65940000 0 0 0 7141800 0 9222500 0 0 0 7893500 7172100 0 14350000 0 20160000 46981 2207 42130 393788;393789;393790;393791;393792;393793 310583 310583 1 SIGTDNVCR Unmodified 1020.4658 0.4658429 4919 Q9UI26 IPO11 Importin-11 yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 19.601 19.972 2 0.01167 19208 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 62.464 36.525 19210000 0 0 0 0 0 3930600 0 0 0 0 0 3604500 1960200 4835000 4879500 46982 4919 42131 393794;393795;393796;393797;393798 310584 310584 1 SIGVPIK Acetyl (Protein N-term) 754.45889 0.45889025 1895 P62318 SNRPD3 Small nuclear ribonucleoprotein Sm D3 yes yes 1 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.45 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67.423 66.799 1 0.015071 76896 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 128.38 62.485 1977700000 4395600 8547100 0 101300000 114130000 120480000 152210000 127620000 116280000 157080000 220360000 238460000 142200000 163630000 311010000 46983 1895 42132 393799;393800;393801;393802;393803;393804;393805;393806;393807;393808;393809;393810;393811;393812 310585;310586;310587;310588;310589;310590;310591;310592;310593;310594;310595 310594 0 SIGVYDVVELK Unmodified 1220.6653 0.66525421 3357 Q8N684 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.176 80.236 2 0.025809 92675 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 51.762 12.215 51202000 0 0 0 1100300 3012400 3472800 2666600 4023800 3165700 7589500 6363200 4991100 1924600 3706800 9185000 46984 3357 42133 393813;393814;393815;393816;393817;393818;393819;393820;393821;393822;393823;393824 310596 310596 1 SIHANFSSGVGTTAASSK Unmodified 1720.838 0.83802663 3250 Q8IWZ3 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.54 3.69 4 9 2 1 1 1 1 1 1 1 1 1 1 1 42.297 40.409 2;3 3.2307E-05 56132 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.093 50.17 103350000 40328000 9229800 4241600 0 3360200 4627200 0 3672100 0 5023600 0 9680300 6906200 6792600 9487900 46985 3250 42134 393825;393826;393827;393828;393829;393830;393831;393832;393833;393834;393835;393836;393837 310597;310598;310599;310600;310601;310602;310603;310604;310605;310606 310601 9 SIHEIPREELR Unmodified 1377.7365 0.7364621 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.339 35.521 3 0.00070713 39296 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 75.416 43.407 379810000 0 0 0 25320000 8489100 33331000 22978000 30595000 20104000 30095000 29512000 38642000 54250000 32260000 54230000 46986 5262 42135 393838;393839;393840;393841;393842;393843;393844;393845;393846;393847;393848;393849 310607;310608;310609;310610;310611;310612;310613;310614;310615;310616;310617 310613 10 SIHFSSPVFTSR Acetyl (Protein N-term) 1405.699 0.69901396 69;88 CON__P08729;CON__Q3KNV1;P08729 KRT7 Keratin, type II cytoskeletal 7 no no 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.846 79.904 2 8.7353E-09 91893 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 132.57 117.42 + 691840000 0 0 0 21516000 43364000 55701000 53655000 49183000 43501000 71909000 68760000 90467000 33417000 58604000 101760000 46987 69;88 42136 393850;393851;393852;393853;393854;393855;393856;393857;393858;393859;393860;393861 310618;310619;310620;310621;310622;310623;310624;310625;310626;310627;310628;310629;310630 310622 13 SIHISCPK Unmodified 940.48004 0.4800364 4111 Q9BRP4 PAAF1 Proteasomal ATPase-associated factor 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 29.695 25.283 2 0.0056658 32315 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 117.4 90.232 178230000 152050000 0 26176000 0 0 0 0 0 0 0 0 0 0 0 0 46988 4111 42137 393862;393863 310631;310632 310632 2 SIHRDHIESPK Unmodified 1317.6789 0.67894722 2164 Q08AD1 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 8.8478 9.066 3 0.00049485 7727 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 77.593 46.704 5952600 0 0 0 0 0 0 0 0 0 418620 0 5534000 0 0 0 46989 2164 42138 393864;393865 310633 310633 1 SIIEGPIIK Unmodified 968.59063 0.59063271 28 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67.7 66.577 2 0.019227 75615 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 54.157 40 449710000 24891000 263390000 29182000 6554800 0 14756000 8114000 7755200 6862700 12896000 13751000 17916000 11050000 13128000 19466000 46990 28 42139 393866;393867;393868;393869;393870;393871;393872;393873;393874;393875;393876;393877;393878;393879 310634;310635;310636;310637;310638;310639;310640;310641;310642;310643 310642 10 SIIGMGTGAGAYILTR Oxidation (M) 1595.8341 0.83412723 3632 Q92597 NDRG1 Protein NDRG1 yes yes 0 1 0 By MS/MS 10 0 2 2 77.952 78.217 2 0.0035673 89866 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.87 29.707 12789000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12789000 46991 3632 42140 393880;393881 310644;310645 310644 5132 1 SIIGMIDMFHK 2 Oxidation (M) 1322.6363 0.63627905 1295 P31151;Q86SG5 S100A7;S100A7A Protein S100-A7;Protein S100-A7A yes no 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 30 4 2 2 1 2 5 2 3 3 3 2 1 71.057 71.098 2;3 5.5399E-05 83381 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 120.31 99.404 1539300000 0 0 0 1097400000 7136500 56210000 7703700 13533000 52668000 15888000 96228000 105720000 66029000 6566900 14151000 46992 1295 42141 393882;393883;393884;393885;393886;393887;393888;393889;393890;393891;393892;393893;393894;393895;393896;393897;393898;393899;393900;393901;393902;393903;393904;393905;393906;393907;393908;393909;393910;393911 310646;310647;310648;310649;310650;310651;310652;310653;310654;310655;310656;310657;310658;310659;310660;310661;310662;310663;310664;310665;310666;310667;310668;310669 310668 1911;1912 12 SIIGMIDMFHK Oxidation (M) 1306.6414 0.64136442 1295 P31151;Q86SG5 S100A7;S100A7A Protein S100-A7;Protein S100-A7A yes no 0 1 0 By MS/MS By MS/MS By matching By matching By matching 10 0 7 1 2 1 2 1 79.003 79.036 3 0.0034032 92158 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 48.004 37.952 39527000 0 0 0 16176000 0 9928100 0 0 0 0 4544300 7096700 0 1782800 0 46993 1295 42141 393912;393913;393914;393915;393916;393917;393918 310670;310671 310671 1911;1912 2 SIIGVIPYFPYSK Unmodified 1482.8123 0.8122528 388 O60256 PRPSAP2 Phosphoribosyl pyrophosphate synthase-associated protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 97.296 89.165 2 4.2477E-11 115151 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 113.44 88.569 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46994 388 42142 393919 310672 310672 1 SIILEGFK Unmodified 905.52222 0.52221879 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 73.424 72.213 1;2 0.020609 82114 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.659 23.867 1386800000 785850000 0 253540000 18238000 19496000 36725000 22645000 32411000 19563000 34846000 34931000 34275000 22021000 24089000 48117000 46995 643 42143 393920;393921;393922;393923;393924;393925;393926;393927;393928;393929;393930;393931;393932;393933;393934 310673;310674;310675;310676;310677;310678;310679;310680;310681;310682;310683;310684;310685;310686;310687;310688 310676 14 SIINHLSSMQK Oxidation (M) 1272.6496 0.64962092 5374 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 4 1 2 1 55.095 55.498 2 0.017727 62647 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 40.067 16.639 + 422710000 0 0 0 0 0 0 0 69853000 0 0 0 267570000 0 85291000 0 46996 5374 42144 393935;393936;393937;393938 310689 310689 6753 1 SIIPLPHPVRPEDIE Unmodified 1710.9305 0.93047046 1852 P61599 NAA20 N-alpha-acetyltransferase 20 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 3 2 2 2 1 1 1 79.661 79.829 2;3 0.00022534 92061 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 78.692 62.06 644260000 0 0 0 0 0 0 74032000 222610000 299820000 14850000 10472000 17281000 0 0 5187900 46997 1852 42145 393939;393940;393941;393942;393943;393944;393945;393946;393947;393948;393949;393950 310690;310691;310692;310693;310694;310695;310696;310697;310698;310699;310700;310701;310702;310703;310704 310698 13 SIIQSAQQDSIK Unmodified 1316.6936 0.69359423 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 46.807 45.262 2 5.1248E-23 55828 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 166.19 132.92 1274000000 24242000 526950000 6806800 38093000 41484000 76748000 42529000 50349000 47374000 65672000 61746000 79726000 56070000 60563000 95644000 46998 3641 42146 393951;393952;393953;393954;393955;393956;393957;393958;393959;393960;393961;393962;393963;393964;393965;393966;393967 310705;310706;310707;310708;310709;310710;310711;310712;310713;310714;310715;310716;310717;310718;310719;310720;310721;310722;310723;310724 310714 18 SIIQSAQQDSIKK Unmodified 1444.7886 0.78855725 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 2 22 1 1 2 2 1 2 2 1 2 2 2 2 2 2 35.93 35.675 2;3 3.1107E-07 39159 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 79.886 57.336 455420000 106270000 0 14795000 24448000 25306000 13448000 39692000 24162000 8613500 18221000 27168000 40191000 53240000 32050000 27812000 46999 3641 42147 393968;393969;393970;393971;393972;393973;393974;393975;393976;393977;393978;393979;393980;393981;393982;393983;393984;393985;393986;393987;393988;393989;393990;393991 310725;310726;310727;310728;310729;310730;310731;310732;310733;310734;310735;310736;310737;310738;310739 310728 14 SIISMFDRENK Oxidation (M) 1354.6551 0.65510023 480 O75340 PDCD6 Programmed cell death protein 6 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 55.453 55.61 3 0.0074124 63080 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 42.243 31.694 57107000 0 0 0 0 3657100 5832100 7082400 5349800 0 4895100 6307400 12861000 5408700 5713400 0 47000 480 42148 393992;393993;393994;393995;393996;393997;393998;393999;394000 310740 310740 605 1 SIISMFDRENK Unmodified 1338.6602 0.66018561 480 O75340 PDCD6 Programmed cell death protein 6 yes yes 0 0 1 By matching By matching By matching By matching By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 70.788 70.987 3 0.038151 80875 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.653 39.651 26385000 0 0 0 0 0 1871100 0 2625400 1710600 0 0 3424700 2608900 2515800 11628000 47001 480 42148 394001;394002;394003;394004;394005;394006;394007 310741 310741 0 SILCQYPASLPDAHK Unmodified 1698.8399 0.83994089 3098 Q7Z4H7 HAUS6 HAUS augmin-like complex subunit 6 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 66.309 66.049 3 0.0045334 76039 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 40.237 33.006 81428000 0 0 10139000 2500500 4881300 5800600 4696600 6031000 3560100 7681800 7527800 9908700 8410200 10290000 0 47002 3098 42149 394008;394009;394010;394011;394012;394013;394014;394015;394016;394017;394018;394019 310742;310743;310744;310745 310744 4 SILEDPPSISEGCGGR Unmodified 1672.7726 0.77264919 4672 Q9NVM9 ASUN Protein asunder homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.103 65.262 2 2.5187E-05 73857 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 86.814 78.301 52734000 0 0 0 0 2653500 4817300 3348200 3423300 2639800 5465700 4997600 7849000 3942400 4901100 8695900 47003 4672 42150 394020;394021;394022;394023;394024;394025;394026;394027;394028;394029;394030;394031 310746;310747;310748;310749;310750;310751;310752;310753;310754;310755;310756;310757 310753 12 SILEILSK Unmodified 901.54843 0.54843354 2269 Q13315 ATM Serine-protein kinase ATM yes yes 0 0 0 By MS/MS 2 0 1 1 87.603 79.473 2 0.011537 103375 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 109.01 44.209 26732000 26732000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47004 2269 42151 394032 310758 310758 1 SILEIMHK Unmodified 969.53174 0.53173762 153 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 yes yes 0 0 0 By MS/MS 2 0 1 1 70.49 62.205 2 0.018796 82900 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.029 60.324 10716000 10716000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47005 153 42152 394033 310759 310759 1 SILEQLAEK Unmodified 1029.5706 0.57062555 1224 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 68.253 68.394 2 0.01448 78972 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 58.23 10.573 89160000 0 0 0 0 3998300 6873300 5504500 0 4659900 8818900 8026500 9280200 6990300 12744000 22264000 47006 1224 42153 394034;394035;394036;394037;394038;394039;394040;394041;394042;394043;394044 310760;310761;310762;310763;310764 310764 5 SILFSNR Unmodified 835.4552 0.45520186 4034 Q99614 TTC1 Tetratricopeptide repeat protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 46.696 46.939 2 0.028162 52401 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 76.833 40.246 97035000 0 0 0 0 5189100 7373100 0 6173100 5095100 6360100 17112000 23594000 0 0 26138000 47007 4034 42154 394045;394046;394047;394048;394049;394050;394051;394052 310765;310766;310767;310768 310767 4 SILFVPTSAPR Unmodified 1186.671 0.67100829 1002 P14625 HSP90B1 Endoplasmin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 78.62 77.563 2 6.3305E-05 89926 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 113.62 81.688 3008500000 213940000 92832000 25834000 98885000 118480000 241120000 151180000 179230000 95673000 293130000 289520000 263480000 178190000 235350000 531620000 47008 1002 42155 394053;394054;394055;394056;394057;394058;394059;394060;394061;394062;394063;394064;394065;394066;394067;394068;394069 310769;310770;310771;310772;310773;310774;310775;310776;310777;310778;310779;310780;310781;310782;310783;310784;310785;310786;310787;310788 310788 20 SILFVPTSAPRGLFDEYGSK Unmodified 2183.1263 0.12626973 1002 P14625 HSP90B1 Endoplasmin yes yes 0 0 1 By MS/MS 2 0 1 1 95.211 87.08 3 0.0023459 112617 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 28.202 19.708 7683300 7683300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47009 1002 42156 394070 310789;310790 310790 2 SILIDESTQATEPECMVPVVLGAK Unmodified 2586.2921 0.29209079 3683 Q92900 UPF1 Regulator of nonsense transcripts 1 yes yes 0 0 0 By MS/MS 2 0 1 1 95.702 90.837 3 1.5883E-68 112627 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.881 79.417 38378000 0 38378000 0 0 0 0 0 0 0 0 0 0 0 0 0 47010 3683 42157 394071 310791;310792 310792 2 SILLATDVASR Unmodified 1144.6452 0.64518747 4337 Q9H0S4 DDX47 Probable ATP-dependent RNA helicase DDX47 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 65.28 65.439 2 0.005428 74119 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.067 23.623 30808000 0 0 0 0 2046300 2386100 2072000 2833500 2089500 3471500 4503300 4986900 0 2429200 3989700 47011 4337 42158 394072;394073;394074;394075;394076;394077;394078;394079;394080;394081;394082 310793;310794;310795;310796;310797;310798;310799;310800 310795 8 SILLSVPLLVVDNK Unmodified 1508.9178 0.91778051 1721 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 96.603 96.737 2 5.71E-13 112326 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 109.6 54.991 24072000 0 0 0 0 0 1003000 619810 985580 1119300 4851300 3243700 0 1048800 1807400 9393200 47012 1721 42159 394083;394084;394085;394086;394087;394088;394089;394090;394091 310801;310802;310803;310804;310805;310806 310803 6 SILNSLSGEELETLK Unmodified 1631.8618 0.86178177 4616 Q9NRY5 FAM114A2 Protein FAM114A2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 3 1 1 1 1 1 1 1 1 1 1 85.992 84.867 2;3 2.9608E-15 105950 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 146.5 129.07 238790000 0 144790000 6853500 0 4716500 4380400 0 8758300 0 16374000 9507600 8081600 3994900 5897100 25436000 47013 4616 42160 394092;394093;394094;394095;394096;394097;394098;394099;394100;394101;394102;394103;394104 310807;310808;310809;310810;310811;310812;310813;310814;310815;310816 310808 9 SILPQAALEEIHK Unmodified 1447.8035 0.80347903 556 O75911 DHRS3 Short-chain dehydrogenase/reductase 3 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 76.764 76.185 3 0.00048731 87984 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 53.869 47.288 69810000 9810800 0 0 0 2659600 5353800 2658200 4627300 4796700 8219300 5093400 7117400 3774600 7052800 8645800 47014 556 42161 394105;394106;394107;394108;394109;394110;394111;394112;394113;394114;394115;394116 310817;310818;310819;310820;310821;310822;310823;310824;310825;310826 310823 8 SILPTAPR Unmodified 853.50215 0.50215205 1166 P23588 EIF4B Eukaryotic translation initiation factor 4B yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.425 48.586 2 0.011784 54069 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.134 21.37 1070000000 0 0 0 40903000 39180000 37923000 51448000 48378000 39894000 65164000 149940000 190620000 67469000 123600000 215480000 47015 1166 42162 394117;394118;394119;394120;394121;394122;394123;394124;394125;394126;394127;394128 310827;310828;310829;310830;310831 310831 3 SILQERVK Unmodified 971.57638 0.57637963 974 P13010 XRCC5 X-ray repair cross-complementing protein 5 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 36.547 30.875 2 0.016484 42833 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 127.02 35.395 496270000 460200000 36077000 0 0 0 0 0 0 0 0 0 0 0 0 0 47016 974 42163 394129;394130 310832 310832 1 SILQQAGVEMK Unmodified 1202.6329 0.63290823 3266 Q8IXQ6 PARP9 Poly [ADP-ribose] polymerase 9 yes yes 0 0 0 By MS/MS 2 0 1 1 68.796 62.897 2 0.0028999 80485 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.998 51.678 30112000 0 30112000 0 0 0 0 0 0 0 0 0 0 0 0 0 47017 3266 42164 394131 310833 310833 1 SILRDALSDLALHFLNK Unmodified 1925.0734 0.0734463 1642 P50991 CCT4 T-complex protein 1 subunit delta yes yes 0 0 1 By MS/MS 2 0 1 1 103.07 98.345 3 8.8831E-07 121501 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.495 87.541 7765700 0 7765700 0 0 0 0 0 0 0 0 0 0 0 0 0 47018 1642 42165 394132 310834 310834 1 SILSELK Unmodified 788.46437 0.46436956 4578 Q9NQW7 XPNPEP1 Xaa-Pro aminopeptidase 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 71.039 63.985 2 0.039422 84875 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.297 2.6812 324000000 161860000 162140000 0 0 0 0 0 0 0 0 0 0 0 0 0 47019 4578 42166 394133;394134 310835;310836 310836 2 SILSPGGSCGPIK Unmodified 1271.6544 0.65437195 1977 P78347 GTF2I General transcription factor II-I yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.387 55.479 2 9.8923E-16 63199 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 157.66 95.664 511290000 0 0 0 0 97714000 0 91697000 0 0 165860000 0 0 0 0 156020000 47020 1977 42167 394135;394136;394137;394138;394139;394140;394141;394142;394143;394144;394145;394146 310837;310838;310839;310840;310841;310842;310843;310844;310845;310846;310847;310848;310849 310844 13 SILTLSHEPK Unmodified 1123.6237 0.62372375 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.69 3.47 2 2 9 2 1 1 1 1 1 1 1 1 1 1 1 47.255 45.633 2 0.0026721 58639 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 102.07 39.521 803410000 580650000 5313600 71591000 0 0 24364000 0 11378000 0 15029000 15040000 18425000 14841000 19593000 27182000 47021 3119 42168 394147;394148;394149;394150;394151;394152;394153;394154;394155;394156;394157;394158;394159 310850;310851;310852;310853;310854;310855;310856;310857;310858;310859;310860;310861;310862 310859 12 SILVSPTGPSR Unmodified 1112.619 0.61897272 2432 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 48.212 48.606 2 0.036836 53682 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.344 4.4518 12534000 0 0 0 0 0 0 3429100 0 0 0 0 0 0 0 9104800 47022 2432 42169 394160;394161 310863;310864 310864 2 SILVSPTGPSRVAFDPEQK Unmodified 2027.0688 0.068754852 2432 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B yes yes 0 0 1 By MS/MS 2 0 1 1 80.416 72.286 3 0.004041 94869 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 44.391 30.964 13934000 13934000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47023 2432 42170 394162 310865 310865 1 SILYDERSVHK Unmodified 1345.699 0.69901396 1194 P25787 PSMA2 Proteasome subunit alpha type-2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 3 1 2 36.5 31.538 2;3 0.0028109 44067 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 125.68 80.002 682950000 622460000 36452000 24040000 0 0 0 0 0 0 0 0 0 0 0 0 47024 1194 42171 394163;394164;394165;394166;394167;394168 310866;310867;310868;310869;310870;310871 310868 5 SIMDNFTEIIK Unmodified 1309.6588 0.65878863 2543 Q15528 MED22 Mediator of RNA polymerase II transcription subunit 22 yes yes 0 0 0 By MS/MS 10 0 1 1 88.371 88.521 2 0.014397 102405 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.598 30.929 3263300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3263300 47025 2543 42172 394169 310872 310872 1 SIMGLEGEDEGAISMLSDNTAK Unmodified 2267.0297 0.029728088 3564 Q8WVM8 SCFD1 Sec1 family domain-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 90.113 85.217 2 2.5177E-101 105860 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 169.92 154.54 31427000 0 31427000 0 0 0 0 0 0 0 0 0 0 0 0 0 47026 3564 42173 394170 310873 310873 1 SIMQSNTLTK Oxidation (M) 1137.57 0.56997362 5247 Q9Y5S2 CDC42BPB Serine/threonine-protein kinase MRCK beta yes yes 0 1 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 22.393 18.821 2 0.022435 23376 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 60.91 30.744 21116000 0 16841000 4275100 0 0 0 0 0 0 0 0 0 0 0 0 47027 5247 42174 394171;394172;394173 310874;310875 310875 2 SIMQSNTLTK Unmodified 1121.5751 0.575059 5247 Q9Y5S2 CDC42BPB Serine/threonine-protein kinase MRCK beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 39.744 36.059 2 0.00091496 46966 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.62 71.97 94093000 43942000 39766000 0 0 0 0 0 0 0 0 0 0 0 0 10385000 47028 5247 42174 394174;394175;394176 310876;310877;310878 310876 3 SIMSYNGGAVMAMK Acetyl (Protein N-term) 1500.6775 0.67749193 1588 P49720 PSMB3 Proteasome subunit beta type-3 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS 4.33 4.03 1 1 1 1 1 1 92.007 92.218 2 1.6709E-13 97533 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 109.83 88.96 105560000 11749000 85915000 0 0 0 0 0 0 0 0 0 0 0 0 7893400 47029 1588 42175 394177;394178;394179 310879;310880;310881 310880 3 SIMSYNGGAVMAMK Acetyl (Protein N-term);Oxidation (M) 1516.6724 0.67240656 1588 P49720 PSMB3 Proteasome subunit beta type-3 yes yes 1 1 0 By MS/MS By MS/MS 1 0 2 1 1 104 107.08 2 0.0032561 96481 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 85.533 70.843 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47030 1588 42175 394180;394181 310882;310883 310883 2553 2 SIMTIVGHTDVVK Oxidation (M) 1414.749 0.74900062 4294 Q9GZL7 WDR12 Ribosome biogenesis protein WDR12 yes yes 0 1 0 By MS/MS By MS/MS 2 0 4 3 1 63.571 56.414 2;3 0.0004854 75976 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.616 81.025 57367000 52998000 0 4368800 0 0 0 0 0 0 0 0 0 0 0 0 47031 4294 42176 394182;394183;394184;394185 310884;310885;310886 310885 5761 3 SIMTIVGHTDVVK Unmodified 1398.7541 0.754086 4294 Q9GZL7 WDR12 Ribosome biogenesis protein WDR12 yes yes 0 0 0 By MS/MS 2 0 2 2 79.111 70.98 2;3 1.1318E-07 93320 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 126.19 126.19 74259000 74259000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47032 4294 42176 394186;394187 310887;310888 310888 1 SIMVQSPEK Unmodified 1017.5165 0.51648149 2388 Q14191 WRN Werner syndrome ATP-dependent helicase yes yes 0 0 0 By MS/MS 10 0 1 1 33.293 34.027 2 0.021188 36899 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 52.482 11.457 6396200 0 0 0 0 0 0 0 0 0 0 0 6396200 0 0 0 47033 2388 42177 394188 310889 310889 1 SINAFRETAK Unmodified 1135.5986 0.59857163 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 1 By MS/MS 2 0 1 1 35.24 28.892 2 6.1293E-05 40572 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 138.65 72.354 24188000 24188000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47034 1492 42178 394189 310890;310891 310891 2 SINEFWNK Unmodified 1036.4978 0.49779495 4502 Q9HBM1 SPC25 Kinetochore protein Spc25 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62.516 61.402 2 0.015636 82433 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.561 49.141 174150000 44603000 55926000 9291100 4460500 4298600 6218900 3780100 6114800 4315500 4855800 5938400 4724900 4984300 5295900 9346100 47035 4502 42179 394190;394191;394192;394193;394194;394195;394196;394197;394198;394199;394200;394201;394202;394203;394204 310892;310893;310894;310895;310896 310893 5 SINGILFPGGSVDLR Unmodified 1543.8358 0.83584179 3667 Q92820 GGH Gamma-glutamyl hydrolase yes yes 0 0 0 By MS/MS 10 0 1 1 87.42 87.578 2 0.018857 101224 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.542 6.8349 7062400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7062400 47036 3667 42180 394205 310897 310897 1 SINHASLISALSR Unmodified 1367.7521 0.75211216 3963 Q96QU8 XPO6 Exportin-6 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS 10 0 4 1 1 1 1 64.569 64.775 3 0.015763 73311 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 28.546 21.814 17173000 0 0 0 0 0 3301100 0 0 2857800 1870200 0 0 0 0 9144100 47037 3963 42181 394206;394207;394208;394209 310898 310898 1 SINHQIESPSER Unmodified 1395.6743 0.67425577 5054 Q9UPQ0 LIMCH1 LIM and calponin homology domains-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.36 2.17 2 23 1 1 2 2 2 2 2 1 2 2 2 2 2 2 21.696 21.552 2;3 2.365E-05 22231 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 97.734 84.28 485360000 5507500 0 7600000 33293000 29020000 47660000 52368000 33441000 28436000 35907000 42445000 47901000 35207000 35723000 50850000 47038 5054 42182 394210;394211;394212;394213;394214;394215;394216;394217;394218;394219;394220;394221;394222;394223;394224;394225;394226;394227;394228;394229;394230;394231;394232;394233;394234 310899;310900;310901;310902;310903;310904;310905;310906;310907;310908;310909;310910;310911;310912;310913;310914;310915;310916 310911 10 SINNDTTYCIK Unmodified 1327.6078 0.60781569 2704 Q53H82 LACTB2 Beta-lactamase-like protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 43.029 37.881 2 3.6145E-09 49136 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 137.95 123.28 187630000 0 187630000 0 0 0 0 0 0 0 0 0 0 0 0 0 47039 2704 42183 394235 310917;310918 310918 2 SINNPDMR Oxidation (M) 961.42873 0.42872911 1714 P53396 ACLY ATP-citrate synthase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.29 2.21 1 1 19 2 1 1 1 3 3 3 2 1 1 1 1 1 11.655 11.453 2 0.018149 18629 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 57.281 15.779 1694500000 0 54667000 0 71322000 104500000 96358000 427060000 302490000 358570000 69291000 442020 181060000 5052700 6411200 17240000 47040 1714 42184 394236;394237;394238;394239;394240;394241;394242;394243;394244;394245;394246;394247;394248;394249;394250;394251;394252;394253;394254;394255;394256 310919;310920;310921;310922;310923;310924;310925;310926;310927;310928 310922 2786 9 SINNPDMR Unmodified 945.43381 0.43381449 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 18.422 18.595 2 0.0044102 18478 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 112.17 63.668 3562300000 0 0 0 126270000 260750000 221790000 659580000 851960000 703150000 158770000 230090000 304380000 0 0 45582000 47041 1714 42184 394257;394258;394259;394260;394261;394262;394263;394264;394265;394266 310929;310930;310931;310932;310933;310934;310935;310936;310937 310932 9 SINNPDMRVQILK Unmodified 1526.8239 0.8238969 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS 4 3.46 6 2 3 2 1 1 1 68.03 64.091 2;3 0.0033616 85340 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.014 57.81 612750000 518820000 73333000 12084000 0 0 0 0 3048200 5463500 0 0 0 0 0 0 47042 1714 42185 394267;394268;394269;394270;394271;394272;394273;394274 310938;310939;310940;310941;310942;310943 310941 6 SINNPDMRVQILK Oxidation (M) 1542.8188 0.81881152 1714 P53396 ACLY ATP-citrate synthase yes yes 0 1 1 By MS/MS By MS/MS By matching By matching By matching By MS/MS 5 3.87 5 3 3 1 1 1 1 1 53.913 49.57 2;3 0.001912 68143 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.03 56.745 460490000 374080000 22198000 15135000 3087200 0 0 24225000 0 21763000 0 0 0 0 0 0 47043 1714 42185 394275;394276;394277;394278;394279;394280;394281;394282 310944;310945;310946;310947 310945 2786 2 SINNYNPK Unmodified 948.46649 0.46649483 5227 Q9Y5A9 YTHDF2 YTH domain-containing family protein 2 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 17.199 17.273 2 0.0068464 17286 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 94.163 60.806 112830000 0 0 0 7182200 8286400 11038000 14971000 9657400 12403000 16018000 0 0 0 0 33274000 47044 5227 42186 394283;394284;394285;394286;394287;394288;394289;394290 310948;310949;310950;310951 310948 3 SINPDEAVAYGAAVQAAILIGDK Unmodified 2285.1903 0.19032655 1743 P54652 HSPA2 Heat shock-related 70 kDa protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.5 0.5 3 3 3 2 1 98.914 94.635 2;3 1.1456E-46 117777 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.633 92.519 40029000 24801000 9684800 5544000 0 0 0 0 0 0 0 0 0 0 0 0 47045 1743 42187 394291;394292;394293;394294;394295;394296 310952;310953;310954;310955;310956 310955 5 SINPDEAVAYGAAVQAAILMGDK Oxidation (M) 2319.1417 0.1416618 908 P0DMV9;P0DMV8 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A no no 0 1 0 By MS/MS By MS/MS By MS/MS 2.23 0.576 1 8 4 3 7 3 98.402 94.763 2;3 2.8365E-56 115604 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 132.4 126.02 6221800000 405280000 5220000000 596560000 0 0 0 0 0 0 0 0 0 0 0 0 47046 908 42188 394297;394298;394299;394300;394301;394302;394303;394304;394305;394306;394307;394308;394309 310957;310958;310959;310960;310961;310962;310963;310964;310965;310966;310967 310957 1173 10 SINPDEAVAYGAAVQAAILMGDK Unmodified 2303.1467 0.14674718 908 P0DMV9;P0DMV8 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A no no 0 0 0 By MS/MS By MS/MS By MS/MS 2.21 0.408 15 4 2 16 1 100.89 96.425 2;3 2.6225E-96 115904 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 147.08 141.58 5994400000 796620000 4684700000 513080000 0 0 0 0 0 0 0 0 0 0 0 0 47047 908 42188 394310;394311;394312;394313;394314;394315;394316;394317;394318;394319;394320;394321;394322;394323;394324;394325;394326;394327;394328 310968;310969;310970;310971;310972;310973;310974;310975;310976;310977;310978;310979;310980;310981;310982;310983;310984;310985;310986;310987;310988;310989;310990 310989 21 SINPDEAVAYGAAVQAAILSGDK Unmodified 2259.1383 0.13829098 934 P11142 HSPA8 Heat shock cognate 71 kDa protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.03 3.74 19 6 14 4 18 3 2 2 2 2 2 2 2 97.426 94.733 2;3 1.2667E-157 112650 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 208.2 199.15 27950000000 878450000 25862000000 1076100000 4779900 0 0 0 5410900 0 34663000 26465000 7390000 0 6017800 48334000 47048 934 42189 394329;394330;394331;394332;394333;394334;394335;394336;394337;394338;394339;394340;394341;394342;394343;394344;394345;394346;394347;394348;394349;394350;394351;394352;394353;394354;394355;394356;394357;394358;394359;394360;394361;394362;394363;394364;394365;394366;394367 310991;310992;310993;310994;310995;310996;310997;310998;310999;311000;311001;311002;311003;311004;311005;311006;311007;311008;311009;311010;311011;311012;311013;311014;311015;311016;311017;311018;311019;311020;311021;311022;311023;311024;311025;311026;311027;311028;311029;311030 311017 38 SINQQSGAHVELQR Unmodified 1565.791 0.79101686 3873 Q96I24 FUBP3 Far upstream element-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.403 30.592 3 0.0002404 33665 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 55.335 50.001 510260000 0 0 0 18569000 24973000 36474000 34409000 31158000 29080000 45505000 52908000 63468000 53702000 46797000 73214000 47049 3873 42190 394368;394369;394370;394371;394372;394373;394374;394375;394376;394377;394378;394379 311031;311032;311033;311034;311035;311036;311037;311038;311039;311040;311041;311042 311041 11 SINSILDYISTSK Unmodified 1439.7508 0.75077476 1838 P61201 COPS2 COP9 signalosome complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 90.243 88.874 2 1.4969E-11 103117 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 120.96 98.22 141210000 57254000 53044000 1567200 0 1158500 1249400 834970 1347200 0 4080600 3344900 2108700 0 2344400 12878000 47050 1838 42191 394380;394381;394382;394383;394384;394385;394386;394387;394388;394389;394390;394391;394392 311043;311044;311045;311046;311047;311048;311049 311045 5 SINTDTLSK Unmodified 977.50294 0.50293991 3460 Q8NHV4 NEDD1 Protein NEDD1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 25.361 25.607 2 0.0036441 27404 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 95.502 52.501 118900000 0 0 0 0 7200100 14043000 11674000 0 7521400 11782000 11087000 11301000 13048000 9325000 21913000 47051 3460 42192 394393;394394;394395;394396;394397;394398;394399;394400;394401;394402 311050;311051;311052;311053;311054;311055;311056;311057;311058 311053 9 SINTEVVACSVDSQFTHLAWINTPR Unmodified 2844.3865 0.38647695 2245 Q13162 PRDX4 Peroxiredoxin-4 yes yes 0 0 0 By MS/MS 2 0 1 1 95.386 87.255 3 0.0088869 112824 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 25.67 17.803 30255000 30255000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47052 2245 42193 394403 311059 311059 1 SIPAGAEPGEK Unmodified 1054.5295 0.52948901 4460 Q9H910 HN1L Hematological and neurological expressed 1-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.17 3.18 1 2 9 1 2 1 1 1 1 1 1 1 1 1 22.715 21.875 2 0.028656 27150 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 53.597 38.928 289520000 202380 106150000 0 2400800 0 0 0 5156000 5380900 8403500 31507000 49846000 5785900 22785000 51899000 47053 4460 42194 394404;394405;394406;394407;394408;394409;394410;394411;394412;394413;394414;394415 311060;311061;311062;311063;311064;311065;311066;311067;311068 311061 8 SIPALQSSDSGDLGK Unmodified 1473.7311 0.73110195 4900 Q9UHF7 TRPS1 Zinc finger transcription factor Trps1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 55.974 54.445 2 0.0040078 61227 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.179 43.716 77610000 0 62405000 0 0 5077000 0 5460200 0 4667400 0 0 0 0 0 0 47054 4900 42195 394416;394417;394418;394419;394420;394421;394422 311069;311070;311071;311072;311073 311070 5 SIPALSMETQK Oxidation (M) 1219.6118 0.61183843 3897 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 47.447 42.236 2 0.0042238 55300 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.098 53.008 50260000 0 50260000 0 0 0 0 0 0 0 0 0 0 0 0 0 47055 3897 42196 394423;394424 311074 311074 5402 1 SIPALSMETQK Unmodified 1203.6169 0.61692381 3897 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 60.115 58.724 2 0.015076 66466 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 60.298 27.107 176700000 0 123950000 777330 0 0 0 0 7418400 7862400 0 14830000 0 0 0 21857000 47056 3897 42196 394425;394426;394427;394428;394429;394430 311075;311076;311077;311078;311079 311078 4 SIPATLALESK Unmodified 1128.639 0.63903946 3022 Q6ZWJ1 STXBP4 Syntaxin-binding protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 64 64.145 2 0.0088985 72520 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.064 19.303 21292000 0 0 0 0 2616700 0 0 2714200 0 3996600 3553700 0 3541900 0 4869300 47057 3022 42197 394431;394432;394433;394434;394435;394436 311080;311081;311082;311083;311084 311080 5 SIPDYDFESDEIVAVCAAIAEK Unmodified 2441.1308 0.13082234 2953 Q6PID6 TTC33 Tetratricopeptide repeat protein 33 yes yes 0 0 0 By MS/MS 3 0 1 1 96.176 92.672 3 0.0022668 95763 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 33.348 30.735 3047500 3047500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47058 2953 42198 394437 311085 311085 1 SIPDYWDSSALPDPGFQK Unmodified 2021.9371 0.93707198 4330 Q9H0J9 PARP12 Poly [ADP-ribose] polymerase 12 yes yes 0 0 0 By MS/MS 2 0 1 1 90.057 85.161 2 2.0772E-19 105849 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.51 100.75 28303000 0 28303000 0 0 0 0 0 0 0 0 0 0 0 0 0 47059 4330 42199 394438 311086 311086 1 SIPICTLK Unmodified 930.52084 0.52083858 1137 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 2 1 1 2 1 53.236 53.459 2 0.018283 59196 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.567 27.473 495190000 0 0 0 16339000 0 22885000 21611000 14721000 25683000 0 98952000 59498000 34690000 101030000 99787000 47060 1137 42200 394439;394440;394441;394442;394443;394444;394445;394446;394447;394448;394449;394450 311087;311088;311089 311087 3 SIPLAMAPVFEQK Unmodified 1429.7639 0.7639224 4839 Q9UBF2 COPG2 Coatomer subunit gamma-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.6 3.67 3 7 1 1 1 1 1 1 1 1 1 1 87.236 85.795 2 0.0021071 107503 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.08 76.699 494030000 74819000 381320000 3729500 0 0 6748100 2664100 4339500 2859900 0 7121300 0 0 6824500 3598000 47061 4839 42201 394451;394452;394453;394454;394455;394456;394457;394458;394459;394460 311090;311091;311092;311093 311091 4 SIPLAMAPVFEQK Oxidation (M) 1445.7588 0.75883702 4839 Q9UBF2 COPG2 Coatomer subunit gamma-2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 6.56 3.86 3 1 5 1 2 1 1 1 1 1 1 79.965 77.585 2 5.4355E-06 96650 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.53 81.532 158250000 31627000 87414000 7838600 6068500 5385300 0 0 0 0 0 0 0 0 9002500 10916000 47062 4839 42201 394461;394462;394463;394464;394465;394466;394467;394468;394469 311094;311095;311096;311097;311098;311099;311100;311101;311102 311095 6209 9 SIPLDEGEDEAQR Unmodified 1457.6634 0.66341631 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 42.523 43.042 2 0.0024676 48159 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 96.113 85.356 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47063 2392 42202 394470;394471;394472 311103;311104;311105 311104 3 SIPLDEGEDEAQRR Unmodified 1613.7645 0.76452734 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 38.507 38.602 3 3.3249E-06 42970 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 89.629 76.511 359250000 0 0 0 26707000 32236000 39336000 41380000 31595000 30730000 34515000 0 42138000 44317000 36297000 0 47064 2392 42203 394473;394474;394475;394476;394477;394478;394479;394480;394481;394482 311106;311107;311108;311109;311110;311111;311112;311113 311106 5 SIPMTVDFIR Unmodified 1177.6165 0.61652988 729 P00492 HPRT1 Hypoxanthine-guanine phosphoribosyltransferase yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 83.3 83.311 2 0.018376 95529 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 48.423 24.468 43629000 0 0 0 664190 0 0 0 0 0 0 0 3375600 0 4672900 34917000 47065 729 42204 394483;394484;394485;394486 311114 311114 1 SIPNLAEVK Unmodified 969.5495 0.54949617 4847 Q9UBN7 HDAC6 Histone deacetylase 6 yes yes 0 0 0 By MS/MS 10 0 1 1 56.847 57.459 2 0.049741 64503 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.19 22.703 11225000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11225000 47066 4847 42205 394487 311115 311115 1 SIPPEGLAQSELMR Unmodified 1526.7763 0.776278 5090 Q9Y285 FARSA Phenylalanine--tRNA ligase alpha subunit yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 74.876 75.124 2 0.0045587 85693 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.452 43.92 13740000 0 0 0 0 0 0 0 3068700 0 0 3189300 0 0 0 7482400 47067 5090 42206 394488;394489;394490 311116 311116 1 SIPPEGLAQSELMR Oxidation (M) 1542.7712 0.77119262 5090 Q9Y285 FARSA Phenylalanine--tRNA ligase alpha subunit yes yes 0 1 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 65.972 66.103 2 0.0064834 75612 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 40.715 23.689 48352000 0 0 0 0 4024200 5581100 0 4195600 5141800 0 0 10585000 9462300 0 9361300 47068 5090 42206 394491;394492;394493;394494;394495;394496;394497 311117 311117 6488 1 SIPQGIVAAWR Unmodified 1196.6666 0.66659162 2285 Q13421 MSLN Mesothelin;Megakaryocyte-potentiating factor;Mesothelin, cleaved form yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 78.908 78.962 2 0.0039976 91243 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 62.546 36.162 49798000 0 0 0 1651900 2082500 4546500 2274700 4740400 3247200 0 4343100 9537100 3321500 3740600 10312000 47069 2285 42207 394498;394499;394500;394501;394502;394503;394504;394505;394506;394507;394508 311118;311119;311120;311121;311122;311123 311120 5 SIPQSATWK Unmodified 1016.5291 0.52909508 3208 Q86YP4 GATAD2A Transcriptional repressor p66-alpha yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 39.347 39.704 2 0.037292 44468 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 45.335 22.844 39915000 0 0 0 0 0 0 0 0 5623700 8005700 7756500 7299000 5735500 5494100 0 47070 3208 42208 394509;394510;394511;394512;394513;394514 311124 311124 1 SIPTDNQIK Unmodified 1014.5346 0.53457439 1023 P15559 NQO1 NAD(P)H dehydrogenase [quinone] 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 5.83 4.18 1 2 3 2 1 1 1 1 42.721 42.056 2 0.0035336 29390 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 108.09 72.594 1097800000 68199000 922010000 0 0 0 0 5471700 0 0 0 0 0 0 26238000 75864000 47071 1023 42209 394515;394516;394517;394518;394519;394520 311125;311126;311127;311128;311129;311130 311130 6 SIQADGLVWGSSK Unmodified 1346.683 0.68302954 1174 P24534 EEF1B2 Elongation factor 1-beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69.815 68.928 2 1.0544E-19 79150 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 154.66 97.928 371130000 6109700 3887300 5688400 10397000 10080000 30016000 14673000 12886000 11099000 23110000 49121000 41472000 18283000 34803000 99509000 47072 1174 42210 394521;394522;394523;394524;394525;394526;394527;394528;394529;394530;394531;394532;394533;394534;394535;394536 311131;311132;311133;311134;311135;311136;311137;311138;311139;311140;311141;311142;311143;311144;311145;311146;311147;311148;311149;311150;311151;311152;311153;311154;311155;311156;311157 311145 27 SIQCLTVHK Unmodified 1084.5699 0.56991404 453 O75083 WDR1 WD repeat-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 4 3.46 3 1 1 1 1 1 33.628 30.156 2 0.020033 38074 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 75.738 45.126 428150000 241250000 120030000 58375000 0 0 0 0 0 0 0 0 0 0 0 8483000 47073 453 42211 394537;394538;394539;394540 311158;311159;311160 311160 3 SIQDAELLVK Unmodified 1114.6234 0.6233894 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 66.215 64.915 2 0.0083227 82749 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.516 38.248 29828000 0 20440000 0 0 0 0 0 0 0 4050400 3068900 0 2268300 0 0 47074 5049 42212 394541;394542;394543;394544;394545;394546;394547 311161;311162;311163;311164;311165;311166 311163 6 SIQDLTVTGTEPGQVSSR Unmodified 1873.9381 0.93813461 318 O43318 MAP3K7 Mitogen-activated protein kinase kinase kinase 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 62.37 62.449 2 2.7146E-37 70654 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 155.98 136.85 59848000 0 0 0 3808700 3783200 5421300 5786200 4583200 4166600 6692900 7010400 10132000 0 0 8463300 47075 318 42213 394548;394549;394550;394551;394552;394553;394554;394555;394556;394557 311167;311168;311169;311170;311171;311172;311173;311174;311175;311176;311177 311170 11 SIQEALAR Unmodified 886.48723 0.48723027 3342 Q8N5A5 ZGPAT Zinc finger CCCH-type with G patch domain-containing protein yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 34.684 34.841 2 0.022922 38131 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 60.76 23.785 46038000 0 0 0 2168900 2539700 0 3702000 3634600 3242200 4951300 0 10257000 4890600 0 10652000 47076 3342 42214 394558;394559;394560;394561;394562;394563;394564;394565;394566 311178;311179;311180 311178 3 SIQEIQELDK Unmodified 1201.619 0.6190323 1689 P52565 ARHGDIA Rho GDP-dissociation inhibitor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 3.16 7 4 3 2 7 2 1 1 1 47.22 44.008 2;3 9.8261E-06 65346 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 132.84 90.445 2590500000 410240000 2102800000 37479000 0 0 0 0 3386700 0 0 0 0 13057000 23559000 0 47077 1689 42215 394567;394568;394569;394570;394571;394572;394573;394574;394575;394576;394577;394578;394579;394580 311181;311182;311183;311184;311185;311186;311187;311188;311189;311190;311191;311192;311193;311194;311195;311196;311197 311190 16 SIQEIQELDKDDESLRK Unmodified 2045.0277 0.027677899 1689 P52565 ARHGDIA Rho GDP-dissociation inhibitor 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 6 15 3 1 2 1 2 1 1 2 2 2 2 2 58.686 57.376 3;4 1.1926E-71 78051 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 176.83 159.69 1798200000 693250000 188430000 478290000 4870500 0 0 9054100 14312000 0 7489800 44369000 89418000 14265000 35194000 219230000 47078 1689 42216 394581;394582;394583;394584;394585;394586;394587;394588;394589;394590;394591;394592;394593;394594;394595;394596;394597;394598;394599;394600;394601 311198;311199;311200;311201;311202;311203;311204;311205;311206;311207;311208;311209;311210;311211;311212;311213;311214;311215 311203 15 SIQEVQK Unmodified 830.44978 0.44978213 1451 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 10.39 10.54 2 0.02335 8076 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 89.903 21.504 26289000 0 0 0 0 2519200 0 5070800 3799700 0 3895600 1630700 0 5359200 4013800 0 47079 1451 42217 394602;394603;394604;394605;394606;394607;394608 311216 311216 1 SIQFVDWCPTGFK Unmodified 1583.7442 0.74424959 1961;1962 P68363;P68366 TUBA1B;TUBA4A Tubulin alpha-1B chain;Tubulin alpha-4A chain no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 87.234 87.292 2 3.3897E-16 101112 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 175.86 158 157380000 0 0 0 2704100 5458000 12086000 0 12203000 7938900 16738000 12159000 15662000 10562000 14900000 46970000 47080 1961;1962 42218 394609;394610;394611;394612;394613;394614;394615;394616;394617;394618;394619 311217;311218;311219;311220;311221;311222;311223;311224;311225;311226;311227;311228;311229;311230;311231;311232 311219 16 SIQGEDIPDQR Unmodified 1256.5997 0.59969384 2778 Q5T5Y3 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 34.822 34.943 2 0.00059844 38376 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 79.986 57.205 34002000 0 0 0 3753200 2388600 0 3205500 3203500 3708300 0 6858600 5724200 0 5160400 0 47081 2778 42219 394620;394621;394622;394623;394624;394625;394626;394627 311233;311234;311235;311236;311237 311233 5 SIQGIHPAK Unmodified 949.53451 0.53451481 3823 Q96EV2 RBM33 RNA-binding protein 33 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 16.912 17.029 2 0.022062 17233 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 51.736 13.498 22622000 0 0 0 1912200 2091200 2106800 3225700 0 1993800 2716700 0 3959900 0 0 4615500 47082 3823 42220 394628;394629;394630;394631;394632;394633;394634;394635 311238;311239 311239 2 SIQHLALGK Unmodified 965.56581 0.56581494 2833 Q5VZK9 LRRC16A Leucine-rich repeat-containing protein 16A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 34.766 34.898 2 0.011336 38448 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 62.969 33.631 82463000 0 0 0 5573500 3432900 8442800 5146400 5060000 6045200 7751900 9319300 0 13371000 7217300 11103000 47083 2833 42221 394636;394637;394638;394639;394640;394641;394642;394643;394644;394645;394646 311240;311241;311242;311243;311244;311245;311246 311242 6 SIQIPANR Unmodified 897.50321 0.50321468 3089 Q7Z401 DENND4A C-myc promoter-binding protein yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 36.767 36.864 2 0.022888 40727 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 60.788 9.822 34247000 0 0 0 2491000 2571000 4107300 3188600 3257300 2016700 3917500 0 0 4837100 3051100 4809300 47084 3089 42222 394647;394648;394649;394650;394651;394652;394653;394654;394655;394656 311247;311248;311249;311250;311251;311252 311248 6 SIQLDGLVWGASK Unmodified 1372.7351 0.73506511 1255 P29692 EEF1D Elongation factor 1-delta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 2 1 1 1 1 1 1 1 1 1 1 1 85.295 85.03 2 1.8298E-09 98458 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 136.48 106.22 148040000 431450 21131000 0 0 3689500 9358600 4537300 7750400 6491600 14690000 15019000 13204000 4926800 10440000 36368000 47085 1255 42223 394657;394658;394659;394660;394661;394662;394663;394664;394665;394666;394667;394668;394669;394670 311253;311254;311255;311256;311257;311258;311259;311260;311261;311262;311263 311259 10 SIQMLTLLR Oxidation (M) 1089.6216 0.62161526 2293 Q13445 TMED1 Transmembrane emp24 domain-containing protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 74.299 74.483 2 0.005263 85845 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 70.919 36.111 17995000 0 0 0 0 0 0 3211800 0 0 4634900 4865600 5282900 0 0 0 47086 2293 42224 394671;394672;394673;394674;394675 311264;311265;311266;311267;311268 311266 3752 5 SIQPQVSPR Unmodified 1010.5509 0.55089316 2270 Q13322 GRB10 Growth factor receptor-bound protein 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 28.121 28.322 2 0.0036563 30718 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 89.355 24.103 192490000 0 0 0 0 14760000 15291000 15664000 0 0 20644000 25254000 0 41694000 23732000 35455000 47087 2270 42225 394676;394677;394678;394679;394680;394681;394682;394683 311269;311270;311271;311272;311273;311274;311275;311276 311276 8 SIQSDERDDITENYK Unmodified 1811.8174 0.81735077 341 O43548 TGM5 Protein-glutamine gamma-glutamyltransferase 5 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 38.166 38.005 3 0.034422 42701 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 28.089 23.987 9425200 0 0 0 5877400 0 0 0 3547900 0 0 0 0 0 0 0 47088 341 42226 394684;394685 311277 311277 1 SIQTPQSHGTLTAELWDNK Unmodified 2125.044 0.043996665 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 72.663 72.191 3 2.2872E-31 92102 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.77 96.016 122260000 0 19203000 6093200 0 0 8967000 4720800 5884600 7433200 10551000 9694500 8987100 7203000 7843100 25676000 47089 5216 42227 394686;394687;394688;394689;394690;394691;394692;394693;394694;394695;394696;394697 311278;311279;311280;311281;311282;311283;311284;311285;311286;311287;311288 311281 11 SIRDTPAK Unmodified 886.48723 0.48723027 830 P06748 NPM1 Nucleophosmin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching 6.56 3.9 6 1 9 2 3 2 1 1 1 1 1 1 1 1 1 7.2563 6.0179 1;2 0.015163 6850 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 123.16 54.941 10577000000 7626800000 709150000 1533700000 0 0 0 90141000 79747000 78793000 53490000 94990000 63459000 77177000 60901000 108820000 47090 830 42228 394698;394699;394700;394701;394702;394703;394704;394705;394706;394707;394708;394709;394710;394711;394712;394713 311289;311290;311291;311292 311289 2 SIRITAMDTEDQGVK Unmodified 1662.8247 0.82468476 4428 Q9H6Z4 RANBP3 Ran-binding protein 3 yes yes 0 0 1 By MS/MS 2 0 2 2 60.187 51.946 3 0.00037027 70347 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.416 56.472 136880000 136880000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47091 4428 42229 394714;394715 311293;311294;311295 311293 3 SIRPDNMSEYSK Unmodified 1425.6558 0.65582851 2314;3658 Q92769;Q13547 HDAC2;HDAC1 Histone deacetylase 2;Histone deacetylase 1 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 2 1 1 1 30.919 31.241 2;3 4.782E-08 34099 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 122.7 97.461 1284700000 0 0 0 0 0 153950000 0 0 37026000 160060000 361940000 0 138510000 163280000 269930000 47092 3658;2314 42230 394716;394717;394718;394719;394720;394721;394722;394723 311296;311297;311298;311299;311300;311301;311302;311303;311304 311302 6 SIRPDNMSEYSK Oxidation (M) 1441.6507 0.65074314 2314;3658 Q92769;Q13547 HDAC2;HDAC1 Histone deacetylase 2;Histone deacetylase 1 no no 0 1 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 21 2 2 1 1 2 2 2 2 2 2 1 2 16.429 16.623 2;3 0.0016075 16474 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 76.165 73.067 624310000 0 0 0 47903000 40791000 7354500 8947000 43289000 41745000 66396000 75468000 116750000 71367000 14209000 90091000 47093 3658;2314 42230 394724;394725;394726;394727;394728;394729;394730;394731;394732;394733;394734;394735;394736;394737;394738;394739;394740;394741;394742;394743;394744 311305;311306;311307;311308;311309;311310;311311;311312;311313;311314;311315;311316;311317;311318;311319;311320 311306 3778 10 SIRPGLSPYR Unmodified 1144.6353 0.63529149 2441 Q14697 GANAB Neutral alpha-glucosidase AB yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 37.633 37.863 3 0.00086095 41749 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 125.3 105.54 440880000 0 0 0 21619000 0 21478000 22084000 26397000 16184000 32763000 71263000 64746000 0 45059000 119280000 47094 2441 42231 394745;394746;394747;394748;394749;394750;394751;394752;394753;394754 311321;311322;311323;311324;311325;311326;311327;311328;311329 311325 6 SISADDDLQESSR Unmodified 1421.627 0.62703081 1075 P18615 NELFE Negative elongation factor E yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 31.851 31.994 2 5.6287E-07 35085 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 113.63 104.2 38774000 0 0 0 0 11585000 0 0 0 0 0 0 0 0 0 27189000 47095 1075 42232 394755;394756 311330;311331 311331 2 SISADSFDQRDPGTPNDDSDIK Unmodified 2379.0462 0.046241089 165 O00512 BCL9 B-cell CLL/lymphoma 9 protein yes yes 0 0 1 By matching By MS/MS By MS/MS 10 0 3 1 1 1 52.676 52.807 3 0.0032249 59926 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 23.912 19.473 13214000 0 0 0 0 0 0 2844200 0 3589400 6780200 0 0 0 0 0 47096 165 42233 394757;394758;394759 311332;311333 311332 2 SISDMWTMVK Unmodified 1196.557 0.55696609 3311 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 82.817 81.751 2 0.0092218 102098 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.827 61.446 84248000 21514000 38086000 0 0 0 2126300 673820 3164800 0 1988500 1882200 2821900 794970 2856900 8338600 47097 3311 42234 394760;394761;394762;394763;394764;394765;394766;394767;394768;394769;394770 311334;311335;311336;311337;311338 311335 5 SISDMWTMVK Oxidation (M) 1212.5519 0.55188071 3311 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 yes yes 0 1 0 By MS/MS By MS/MS 2 0 3 1 2 77.785 71.301 2;3 0.018317 93382 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.04 54.826 22761000 12350000 10411000 0 0 0 0 0 0 0 0 0 0 0 0 0 47098 3311 42234 394771;394772;394773 311339;311340 311340 4906 2 SISEQRPPQAPK Unmodified 1336.7099 0.709913 4802 Q9P206 KIAA1522 Uncharacterized protein KIAA1522 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 22.933 23.104 3 0.0046497 23263 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.274 42.175 85646000 0 0 0 10972000 12963000 0 0 0 0 0 0 0 24375000 16325000 21010000 47099 4802 42235 394774;394775;394776;394777;394778 311341;311342 311341 1 SISFATELQSMMYSLGDARR Unmodified 2262.0773 0.077287403 508 O75486 SUPT3H Transcription initiation protein SPT3 homolog yes yes 0 0 1 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 69.944 70.142 3 0.0053664 80728 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 18.784 13.908 24551000 0 0 0 0 0 0 0 8947400 0 3657400 0 9716500 2229400 0 0 47100 508 42236 394779;394780;394781;394782 311343 311343 1 SISINLMGR Oxidation (M) 1005.5277 0.52771487 103 CON__Q7Z794;Q7Z794 KRT77 Keratin, type II cytoskeletal 1b yes no 0 1 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 55.611 55.649 2 0.032995 64273 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 42.109 11.035 + 16049000 0 0 0 3809100 0 0 0 0 0 4740600 0 7498800 0 0 0 47101 103 42237 394783;394784;394785 311344 311344 1 SISISVAR Unmodified 831.48142 0.48141661 780 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 31 3 2 2 3 4 3 1 3 1 3 4 2 46.843 46.978 2 0.0034911 49953 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 146.94 32.405 + 16719000000 0 0 0 1916800000 894340000 980410000 826700000 4169900000 747850000 1238000000 908770000 1883500000 1747900000 661170000 743900000 47102 780 42238 394786;394787;394788;394789;394790;394791;394792;394793;394794;394795;394796;394797;394798;394799;394800;394801;394802;394803;394804;394805;394806;394807;394808;394809;394810;394811;394812;394813;394814;394815;394816 311345;311346;311347;311348;311349;311350;311351;311352;311353;311354;311355;311356;311357;311358;311359;311360;311361;311362;311363;311364;311365;311366;311367;311368;311369;311370;311371;311372;311373;311374;311375;311376;311377;311378;311379;311380;311381;311382;311383;311384;311385;311386;311387;311388;311389;311390;311391;311392;311393;311394;311395;311396;311397;311398;311399;311400;311401;311402;311403;311404;311405;311406;311407;311408;311409;311410;311411;311412;311413;311414;311415;311416;311417;311418;311419;311420;311421;311422;311423;311424;311425;311426;311427;311428;311429 311352 85 SISISVARGGGR Unmodified 1158.6469 0.64691881 780 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 1 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 36.121 36.434 3 0.0014134 39462 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 51.841 26.367 + 45151000 0 0 0 0 0 4050600 0 824850 0 0 0 35959000 4316400 0 0 47103 780 42239 394817;394818;394819;394820 311430 311430 1 SISITSALLTEK Unmodified 1261.7129 0.71293269 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 81.237 79.97 2 9.0284E-07 101254 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 131.28 63.061 548510000 260100000 169980000 20697000 4401500 5427100 6976800 6729500 5303400 7926900 10293000 9513200 11413000 5497000 7778400 16475000 47104 1286 42240 394821;394822;394823;394824;394825;394826;394827;394828;394829;394830;394831;394832;394833;394834;394835;394836;394837 311431;311432;311433;311434;311435;311436;311437;311438;311439;311440;311441;311442;311443;311444;311445;311446;311447;311448 311440 17 SISLEPLQK Unmodified 1013.5757 0.57571092 3299 Q8N0T1 C8orf59 Uncharacterized protein C8orf59 yes yes 0 0 0 By MS/MS 2 0 1 1 65.415 59.497 2 0.0074429 76004 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.19 55.412 80270000 0 80270000 0 0 0 0 0 0 0 0 0 0 0 0 0 47105 3299 42241 394838 311449 311449 1 SISLLCLEGLQK Unmodified 1359.7432 0.74318696 4669 Q9NVI1 FANCI Fanconi anemia group I protein yes yes 0 0 0 By MS/MS 2 0 1 1 91.678 83.548 2 0.0073649 108373 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.142 61.416 22641000 22641000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47106 4669 42242 394839 311450 311450 1 SISLLRYQEESK Unmodified 1451.762 0.76200815 2179 Q10570 CPSF1 Cleavage and polyadenylation specificity factor subunit 1 yes yes 0 0 1 By MS/MS 2 0 1 1 65.492 57.204 3 0.0064705 76899 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.463 35.399 21707000 21707000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47107 2179 42243 394840 311451;311452 311451 2 SISLPSLDLVSAK Unmodified 1328.7551 0.75513185 49 CON__ENSEMBL:ENSBTAP00000032840 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 2 1 1 1 1 1 86.697 86.834 2 0.0010046 100779 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 66.595 47.325 + 36628000 0 0 0 0 0 3280100 2380600 2258000 3758800 6232800 3853500 4458100 2663600 3053200 4688700 47108 49 42244 394841;394842;394843;394844;394845;394846;394847;394848;394849;394850;394851 311453;311454;311455;311456;311457;311458;311459;311460;311461;311462 311454 10 SISLYYTGEK Unmodified 1159.5761 0.57610486 1085 P19338 NCL Nucleolin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58.011 57.101 2 0.0015959 65989 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 93.649 59.56 745520000 6864000 89691000 0 37208000 33144000 33568000 53459000 35475000 43199000 47723000 75494000 77098000 47989000 53468000 111140000 47109 1085 42245 394852;394853;394854;394855;394856;394857;394858;394859;394860;394861;394862;394863;394864;394865 311463;311464;311465;311466;311467;311468;311469;311470;311471;311472;311473;311474;311475;311476;311477;311478;311479;311480;311481;311482;311483;311484;311485 311483 23 SISMSVAGSR Oxidation (M) 1009.4862 0.48624399 77 CON__P19013;P19013 KRT4 Keratin, type II cytoskeletal 4 yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 17.801 18.045 2 0.0082676 18126 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 52.278 43.038 + 94114000 0 0 0 0 0 0 26498000 52129000 0 0 0 3953100 11534000 0 0 47110 77 42246 394866;394867;394868;394869 311486;311487;311488;311489 311486 110 4 SISMTTFTEPEVVFLQSR Oxidation (M) 2087.0245 0.024506776 620 O95081 AGFG2 Arf-GAP domain and FG repeat-containing protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 88.084 88.239 2;3 3.1386E-11 101891 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 88.552 80.641 37736000 0 0 0 0 0 4003200 2883500 0 5673900 0 6473300 0 0 0 18703000 47111 620 42247 394870;394871;394872;394873;394874 311490;311491;311492;311493;311494 311493 759 5 SISNPPGSNLR Unmodified 1140.5887 0.58873523 4393 Q9H4A3 WNK1 Serine/threonine-protein kinase WNK1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 2 1 1 1 1 1 1 1 2 1 1 31.779 31.948 2 2.0677E-05 34790 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 123.86 106.04 716000000 0 0 0 62133000 49824000 0 53614000 52090000 44567000 68146000 62018000 80403000 101650000 55879000 85676000 47112 4393 42248 394875;394876;394877;394878;394879;394880;394881;394882;394883;394884;394885;394886;394887 311495;311496;311497;311498;311499;311500;311501;311502 311498 7 SISNPPGSNLRTT Unmodified 1342.6841 0.68409218 4393 Q9H4A3 WNK1 Serine/threonine-protein kinase WNK1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 39.872 34.9 2 3.29E-22 47586 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 152.7 122.53 528960000 346090000 162600000 20269000 0 0 0 0 0 0 0 0 0 0 0 0 47113 4393 42249 394888;394889;394890;394891 311503;311504;311505;311506;311507 311506 3 SISQHYSK Unmodified 948.46649 0.46649483 3366 Q8N7H5 PAF1 RNA polymerase II-associated factor 1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 8.528 5.4878 2 0.010803 9243 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 111.39 69.739 446480000 310730000 66789000 68965000 0 0 0 0 0 0 0 0 0 0 0 0 47114 3366 42250 394892;394893;394894 311508;311509;311510 311508 3 SISQQSGAR Unmodified 932.46756 0.46755746 3737 Q96AE4 FUBP1 Far upstream element-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching 7.86 3.4 1 1 5 2 1 1 1 1 1 6.1672 5.3239 2 0.0071283 3902 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 73.248 43.063 198370000 0 173420000 0 0 0 5743300 6342000 4978000 0 2350400 0 0 0 0 5534000 47115 3737 42251 394895;394896;394897;394898;394899;394900;394901 311511;311512;311513 311512 2 SISQSISGQK Unmodified 1033.5404 0.54038805 3594 Q8WXI9 GATAD2B Transcriptional repressor p66-beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.402 20.594 2 1.0527E-05 20914 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 146.79 72.811 281250000 0 0 0 18939000 17292000 20350000 21456000 16999000 13472000 26633000 30207000 42911000 34307000 0 38684000 47116 3594 42252 394902;394903;394904;394905;394906;394907;394908;394909;394910;394911;394912;394913 311514;311515;311516;311517;311518;311519;311520;311521;311522;311523;311524;311525;311526 311520 12 SISSDEVNFLVYR Acetyl (Protein N-term) 1569.7675 0.76748745 4270 Q9BZK7 TBL1XR1 F-box-like/WD repeat-containing protein TBL1XR1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 91.339 91.444 2 1.1364E-09 106330 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 134.68 108.08 86201000 0 0 0 0 7765500 5758500 5559600 6385200 5617700 15274000 12958000 14919000 5833400 6129800 0 47117 4270 42253 394914;394915;394916;394917;394918;394919;394920;394921;394922;394923 311527;311528;311529;311530;311531;311532;311533;311534;311535 311533 9 SISSPSVSSETMDK Unmodified 1453.6606 0.66063912 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 0 By MS/MS By matching By matching By matching By matching 10 0 5 1 1 1 1 1 38.886 39.314 2 0.0047644 43870 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 44.847 29.232 28753000 0 0 0 0 0 4713100 0 0 0 3896200 5264600 5320700 0 0 9559000 47118 1601 42254 394924;394925;394926;394927;394928 311536 311536 1 SISSPSVSSETMDKPVDLSTRK Oxidation (M) 2366.1635 0.16351945 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 1 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.86 2.8 1 6 1 1 1 1 1 1 1 46.792 46.438 4 7.4582E-07 58440 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 69.922 69.922 98571000 0 0 16008000 0 10740000 0 11692000 0 0 14523000 0 21320000 0 9476800 14811000 47119 1601 42255 394929;394930;394931;394932;394933;394934;394935 311537;311538;311539;311540 311539 2584 4 SISSPSVSSETMDKPVDLSTRK Unmodified 2350.1686 0.16860483 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 2 By MS/MS 2 0 1 1 59.198 55.396 4 1.1731E-10 69056 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 78.088 74.69 11790000 0 0 11790000 0 0 0 0 0 0 0 0 0 0 0 0 47120 1601 42255 394936 311541;311542 311542 2 SISVIDSPGILSGEK Unmodified 1500.8035 0.80353861 4357 Q9H223 EHD4 EH domain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 78.844 77.722 2 4.0782E-35 89729 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 179.19 160.88 485860000 5190600 244840000 4288900 13184000 14044000 20582000 18191000 15843000 13320000 22453000 18681000 29081000 14751000 20383000 31031000 47121 4357 42256 394937;394938;394939;394940;394941;394942;394943;394944;394945;394946;394947;394948;394949;394950;394951;394952 311543;311544;311545;311546;311547;311548;311549;311550;311551;311552;311553;311554;311555;311556;311557;311558;311559 311548 17 SITADPLDYR Unmodified 1149.5666 0.5666028 1707 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 62.872 62.844 2 0.020509 72717 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 47.198 30.658 25058000 0 0 0 5224900 0 0 0 0 0 10673000 0 9160300 0 0 0 47122 1707 42257 394953;394954;394955 311560;311561 311561 2 SITHDIEEK Unmodified 1070.5244 0.52440364 4898 Q9UHD8 SEPT9 Septin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 19.899 19.864 2 0.0034372 18896 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 104.2 54.074 102280000 0 0 10857000 6094800 5140900 4963000 7031400 6634600 5222200 7241900 14170000 13050000 6355800 5751800 9770900 47123 4898 42258 394956;394957;394958;394959;394960;394961;394962;394963;394964;394965;394966;394967;394968 311562;311563;311564;311565;311566;311567;311568;311569;311570;311571;311572;311573;311574;311575;311576;311577 311565 16 SITHSTVGSK Unmodified 1015.5298 0.52982336 4469 Q9H9B1 EHMT1 Histone-lysine N-methyltransferase EHMT1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 8.6661 5.5806 2 4.8674E-06 7166 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 145.72 100.04 98375000 41198000 28035000 29142000 0 0 0 0 0 0 0 0 0 0 0 0 47124 4469 42259 394969;394970;394971 311578;311579;311580;311581;311582 311581 5 SITILSTPEGTSAACK Unmodified 1634.8185 0.81853675 153 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 63.859 64.007 2 2.3946E-23 72434 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 119.39 101.95 34740000 0 0 0 0 3367700 0 0 0 4430500 5057100 5272700 0 0 7685300 8926900 47125 153 42260 394972;394973;394974;394975;394976;394977 311583;311584;311585;311586;311587;311588;311589;311590;311591;311592 311584 9 SITLPPDEIFR Unmodified 1286.6871 0.68705229 4666 Q9NVE7 PANK4 Pantothenate kinase 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 82.782 82.824 2 6.2828E-05 96087 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 135.71 115.38 155940000 0 0 0 19086000 52319000 63447000 2909500 4438400 3877700 2689100 3638500 3537200 0 0 0 47126 4666 42261 394978;394979;394980;394981;394982;394983;394984;394985;394986 311593;311594;311595;311596;311597;311598;311599;311600;311601;311602;311603;311604;311605;311606 311594 14 SITLPPDEIFRNLENAK Unmodified 1956.0316 0.031641065 4666 Q9NVE7 PANK4 Pantothenate kinase 4 yes yes 0 0 1 By MS/MS 2 0 1 1 94.234 89.338 3 0.0051565 110739 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 44.734 34.395 23718000 0 23718000 0 0 0 0 0 0 0 0 0 0 0 0 0 47127 4666 42262 394987 311607 311607 1 SITNNSSDPFLNGGPYHSR Unmodified 2061.9504 0.95043063 4309 Q9GZV5 WWTR1 WW domain-containing transcription regulator protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 61.407 61.53 3 0.000839 69448 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.831 38.395 20970000 0 0 0 2712400 0 0 0 0 0 0 0 8359000 0 0 9898200 47128 4309 42263 394988;394989;394990 311608 311608 1 SITNTTVCTK Unmodified 1123.5543 0.55432356 2554 Q15637 SF1 Splicing factor 1 yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 21.627 22.122 2 0.0027291 22091 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.688 55.794 12127000 0 0 0 0 0 0 0 0 0 0 3995500 0 0 2978000 5153600 47129 2554 42264 394991;394992;394993 311609 311609 1 SITSDEVNFLVYR Acetyl (Protein N-term) 1583.7831 0.78313752 4091 Q9BQ87 TBL1Y F-box-like/WD repeat-containing protein TBL1Y yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 92.8 92.921 2 0.00029877 107656 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.355 69.783 6579800 0 0 0 0 0 0 0 0 0 2735500 0 0 0 1109200 2735000 47130 4091 42265 394994;394995;394996;394997 311610;311611;311612 311611 3 SITSLSVADTVSSSTTSHTTAK Unmodified 2180.0808 0.080835681 3434 Q8NEZ2 VPS37A Vacuolar protein sorting-associated protein 37A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.952 61.048 3 3.6869E-08 69578 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 60.735 51.792 67841000 0 0 0 3283700 3495200 4605100 4894600 0 4113700 8926600 6489200 6997900 5279700 6065500 13690000 47131 3434 42266 394998;394999;395000;395001;395002;395003;395004;395005;395006;395007;395008;395009 311613;311614;311615;311616;311617;311618;311619;311620;311621;311622;311623;311624;311625 311619 13 SITVSPIPFFNK Unmodified 1348.7391 0.73908786 452 O75061 DNAJC6 Putative tyrosine-protein phosphatase auxilin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 89.11 89.115 2 0.0014767 102908 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 67.563 31.619 14124000 0 0 0 1176500 2688000 0 3040700 3766400 3452500 0 0 0 0 0 0 47132 452 42267 395010;395011;395012;395013;395014;395015;395016;395017;395018;395019 311626;311627;311628;311629;311630;311631;311632;311633;311634 311629 9 SITYSLENK Unmodified 1053.5342 0.53424004 2828 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 3 6 1 1 1 1 1 1 1 1 1 43.387 41.313 2 0.0052293 46864 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 79.596 39.95 334040000 8495600 274760000 6272400 0 7618800 0 6721600 10466000 8302700 0 0 0 11407000 0 0 47133 2828 42268 395020;395021;395022;395023;395024;395025;395026;395027;395028 311635;311636;311637;311638;311639;311640 311638 6 SIVANSNK Unmodified 831.44503 0.4450311 2183 Q12768 KIAA0196 WASH complex subunit strumpellin yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 8.5971 5.2941 2 0.017407 8017 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.59 33.977 104050000 0 104050000 0 0 0 0 0 0 0 0 0 0 0 0 0 47134 2183 42269 395029;395030 311641 311641 0 SIVAVEPR Unmodified 869.49707 0.49706667 2834 Q5VZL5 ZMYM4 Zinc finger MYM-type protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 36.778 37.023 2 0.019504 42270 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 63.565 29.827 72390000 0 0 0 13638000 0 4741200 6849600 4632800 3643700 7287300 0 6677400 9583700 8991600 6345400 47135 2834 42270 395031;395032;395033;395034;395035;395036;395037;395038;395039;395040 311642;311643;311644;311645;311646;311647;311648;311649 311648 8 SIVCQIDTVEGSK Unmodified 1434.7024 0.70244436 3970 Q96RL7 VPS13A Vacuolar protein sorting-associated protein 13A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 57.513 57.784 2 0.00032851 64927 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 90.653 72.789 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47136 3970 42271 395041;395042;395043;395044;395045;395046 311650;311651;311652;311653;311654;311655 311653 6 SIVDNWPENHVK Unmodified 1436.7048 0.70482762 1154 P23368 ME2 NAD-dependent malic enzyme, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 52.475 52.539 3 0.0033135 59581 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 55.04 47.872 444190000 0 0 0 19635000 29632000 36455000 38741000 52792000 40122000 55919000 65629000 105260000 0 0 0 47137 1154 42272 395047;395048;395049;395050;395051;395052;395053;395054;395055 311656;311657;311658;311659;311660;311661;311662;311663;311664 311661 7 SIVEEEEDDDYVELK Unmodified 1810.7996 0.79963502 1638 P50851 LRBA Lipopolysaccharide-responsive and beige-like anchor protein yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching 6.56 3.86 3 1 5 2 2 1 1 1 1 1 70.217 67.616 2 4.5529E-57 84997 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 172.92 166.48 139550000 12968000 115690000 0 0 1656900 3324600 0 0 1647100 0 0 0 0 0 4260900 47138 1638 42273 395056;395057;395058;395059;395060;395061;395062;395063;395064 311665;311666;311667;311668;311669;311670 311666 6 SIVEGIIEEEEEDEEGSESISK Unmodified 2436.0915 0.091519526 5221 Q9Y570 PPME1 Protein phosphatase methylesterase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.44 0.497 5 4 4 3 2 86.14 81.74 2;3 3.0721E-61 98847 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 138.77 133.88 277870000 174810000 56078000 46980000 0 0 0 0 0 0 0 0 0 0 0 0 47139 5221 42274 395065;395066;395067;395068;395069;395070;395071;395072;395073 311671;311672;311673;311674;311675;311676;311677;311678 311674 7 SIVEHVASK Unmodified 968.5291 0.52909508 1972 P78330 PSPH Phosphoserine phosphatase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 17.044 17.475 2 0.0089939 17239 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 68.016 41.414 30043000 0 0 0 0 0 0 0 0 0 0 4905700 7992100 2354700 4362600 10427000 47140 1972 42275 395074;395075;395076;395077;395078 311679 311679 1 SIVGEIVR Unmodified 871.51272 0.51271674 2476 Q15021 NCAPD2 Condensin complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 58.863 58.931 2 0.035595 66784 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 52.403 11.83 126980000 0 0 0 7141700 7407400 16206000 9916400 9326400 6811900 16848000 13024000 18421000 9607400 12274000 0 47141 2476 42276 395079;395080;395081;395082;395083;395084;395085;395086;395087;395088;395089 311680;311681 311681 2 SIVGMTMYNQATQEIAK Unmodified 1883.9121 0.91211956 5094 Q9Y2A7 NCKAP1 Nck-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 84.369 77.944 2 3.2523E-63 99805 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 204.85 188.32 75897000 46886000 29012000 0 0 0 0 0 0 0 0 0 0 0 0 0 47142 5094 42277 395090;395091 311682;311683 311683 2 SIVGMTMYNQATQEIAK Oxidation (M) 1899.907 0.90703418 5094 Q9Y2A7 NCKAP1 Nck-associated protein 1 yes yes 0 1 0 By MS/MS 2 0 1 1 77.85 69.72 2 2.4492E-18 91732 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 113.65 95.91 11703000 11703000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47143 5094 42277 395092 311684 311684 6498 1 SIVIRPLEPQPAPHLAR Unmodified 1893.0949 0.094850444 2481 Q15029 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 2 2 2 2 2 2 2 2 2 2 67.456 67.637 3;4 0.00010393 78208 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 71.08 67.753 547630000 0 0 0 0 5916400 62372000 16401000 38868000 46266000 27355000 31308000 58504000 52713000 55768000 152160000 47144 2481 42278 395093;395094;395095;395096;395097;395098;395099;395100;395101;395102;395103;395104;395105;395106;395107;395108;395109;395110;395111;395112;395113 311685;311686;311687;311688;311689;311690;311691;311692;311693 311691 7 SIVLQAAVPK Unmodified 1024.6281 0.62808085 4760 Q9NZ52 GGA3 ADP-ribosylation factor-binding protein GGA3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 62.692 62.287 2 0.0066775 80723 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.279 26.603 128150000 0 89075000 0 2806800 2419800 4184800 3228800 2241100 2288600 5171300 3597600 4384000 0 3816200 4931300 47145 4760 42279 395114;395115;395116;395117;395118;395119;395120;395121;395122;395123;395124;395125 311694;311695 311694 2 SIVNLDSPMVSPPPDYPGEFFK Oxidation (M) 2451.1668 0.16681392 17 A3KN83 SBNO1 Protein strawberry notch homolog 1 yes yes 0 1 0 By MS/MS 3 0 1 1 92.884 89.656 3 0.0015205 107418 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 41.521 38.234 2019500 0 2019500 0 0 0 0 0 0 0 0 0 0 0 0 0 47146 17 42280 395126 311696 311696 14 1 SIVQEYVK Unmodified 964.52295 0.52294707 2278 Q13395 TARBP1 Probable methyltransferase TARBP1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 55.047 50.183 2 0.01816 65149 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.142 26.425 113790000 0 111970000 1824600 0 0 0 0 0 0 0 0 0 0 0 0 47147 2278 42281 395127;395128 311697 311697 1 SIVSVMDSDTTGK Unmodified 1338.6337 0.63369609 3914 Q96L46 CAPNS2 Calpain small subunit 2 yes yes 0 0 0 By MS/MS 10 0 1 1 57.675 57 2 0.0037937 65442 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 51.998 45.408 15007000 0 0 0 15007000 0 0 0 0 0 0 0 0 0 0 0 47148 3914 42282 395129 311698 311698 1 SIVTAEVSSMPACK Unmodified 1478.7109 0.71090055 3130 Q86SZ2 TRAPPC6B Trafficking protein particle complex subunit 6B yes yes 0 0 0 By MS/MS 2 0 1 1 65.655 59.737 2 7.7868E-39 76446 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 162.38 146.49 35709000 0 35709000 0 0 0 0 0 0 0 0 0 0 0 0 0 47149 3130 42283 395130 311699;311700;311701 311700 3 SIVTAEVSSMPACK Oxidation (M) 1494.7058 0.70581517 3130 Q86SZ2 TRAPPC6B Trafficking protein particle complex subunit 6B yes yes 0 1 0 By MS/MS 2 0 1 1 48.625 42.978 2 0.016908 56001 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 53.211 31.218 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47150 3130 42283 395131 311702 311702 4749 1 SIVTLDGGK Unmodified 888.49165 0.49164694 809 P05413 FABP3 Fatty acid-binding protein, heart yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 43.729 38.732 2 0.014844 50125 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.642 18.077 106080000 0 106080000 0 0 0 0 0 0 0 0 0 0 0 0 0 47151 809 42284 395132;395133 311703;311704 311704 2 SIVTTLVPSELISAVPTTK Unmodified 1955.1191 0.11905909 2433 Q14686 NCOA6 Nuclear receptor coactivator 6 yes yes 0 0 0 By MS/MS 10 0 1 1 94.563 94.71 2 0.0052802 109817 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.204 26.899 1664800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1664800 47152 2433 42285 395134 311705 311705 1 SIVVANYEESIK Unmodified 1350.7031 0.70309628 1323 P32754 HPD 4-hydroxyphenylpyruvate dioxygenase yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.72 2 13 1 1 1 1 1 1 1 2 1 1 1 1 1 1 64.36 64.019 2 4.9881E-08 72634 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 121.5 98.074 428920000 204480 40076000 0 5038000 5654100 8550900 9533400 7524300 6874200 13554000 68809000 58787000 9543800 37596000 157180000 47153 1323 42286 395135;395136;395137;395138;395139;395140;395141;395142;395143;395144;395145;395146;395147;395148;395149 311706;311707;311708;311709;311710;311711;311712;311713;311714;311715;311716;311717;311718 311709 11 SIYEYQPGK Unmodified 1083.5237 0.52367535 4220 Q9BX66 SORBS1 Sorbin and SH3 domain-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 42.932 37.784 2 0.020446 49117 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.243 43.714 14523000 0 14523000 0 0 0 0 0 0 0 0 0 0 0 0 0 47154 4220 42287 395150 311719 311719 1 SIYGERFPDENFK Unmodified 1600.7522 0.75217174 1153 P23284 PPIB Peptidyl-prolyl cis-trans isomerase B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.74 3.55 1 5 3 22 5 2 2 2 2 2 2 1 1 2 2 2 2 2 2 65.444 64.237 2;3 1.0474E-28 83901 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 160.67 143.24 3056300000 861030000 827420000 641430000 14574000 17568000 32670000 23444000 30264000 18830000 42052000 91318000 111980000 23482000 61381000 258900000 47155 1153 42288 395151;395152;395153;395154;395155;395156;395157;395158;395159;395160;395161;395162;395163;395164;395165;395166;395167;395168;395169;395170;395171;395172;395173;395174;395175;395176;395177;395178;395179;395180;395181 311720;311721;311722;311723;311724;311725;311726;311727;311728;311729;311730;311731;311732;311733;311734;311735;311736;311737;311738;311739;311740;311741;311742;311743;311744 311734 20 SIYNLNEDEELTHYGQSLADIEK Unmodified 2680.2504 0.2504202 1970 P78316 NOP14 Nucleolar protein 14 yes yes 0 0 0 By MS/MS 2 0 2 2 89.393 81.263 3 0.00011754 105613 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.768 36.235 5650700 5650700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47156 1970 42289 395182;395183 311745;311746 311745 2 SIYPTLEIDIEGELQK Unmodified 1846.9564 0.95641044 1283 P30520 ADSS Adenylosuccinate synthetase isozyme 2 yes yes 0 0 0 By MS/MS By MS/MS 2.3 0.458 7 3 5 5 96.195 90.493 2;3 2.7804E-07 113057 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.746 67.997 137220000 74215000 63002000 0 0 0 0 0 0 0 0 0 0 0 0 0 47157 1283 42290 395184;395185;395186;395187;395188;395189;395190;395191;395192;395193 311747;311748;311749;311750;311751;311752;311753;311754;311755 311755 7 SIYSQIQEQR Unmodified 1250.6255 0.62551466 4657 Q9NV06 DCAF13 DDB1- and CUL4-associated factor 13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 46.749 46.984 2 0.0017713 52831 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 95.502 74.555 65401000 0 0 0 0 5260400 7737400 7009300 3839700 5598600 6221000 6152800 6873600 5678800 4535300 6493800 47158 4657 42291 395194;395195;395196;395197;395198;395199;395200;395201;395202;395203;395204 311756;311757;311758;311759;311760;311761;311762;311763;311764;311765;311766 311758 10 SIYTPLELQYIEMK Unmodified 1726.8852 0.88515975 1106 P20585 MSH3 DNA mismatch repair protein Msh3 yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 93.79 90.115 2 0.0013577 112052 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.182 57.709 10778000 0 10243000 534620 0 0 0 0 0 0 0 0 0 0 0 0 47159 1106 42292 395205;395206 311767 311767 1 SIYTRSVIDPVPAPVGDSHVDGAAK Unmodified 2550.3078 0.30781592 2248 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 75.885 71.184 4 0.0001696 91461 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.811 45.454 599330000 557070000 26220000 16036000 0 0 0 0 0 0 0 0 0 0 0 0 47160 2248 42293 395207;395208;395209;395210;395211 311768;311769;311770;311771 311770 4 SIYYITGESK Unmodified 1159.5761 0.57610486 862;2716 P08238;Q58FF8 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.87 3.93 2 5 2 14 4 4 1 1 1 2 1 1 1 1 1 1 1 1 2 54.887 53.333 2 8.6705E-05 61738 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 122.13 97.98 21789000000 1511200000 11852000000 410680000 314410000 329810000 781680000 498470000 458870000 350760000 740380000 1021400000 662440000 567300000 724370000 1565200000 47161 862;2716 42294 395212;395213;395214;395215;395216;395217;395218;395219;395220;395221;395222;395223;395224;395225;395226;395227;395228;395229;395230;395231;395232;395233;395234 311772;311773;311774;311775;311776;311777;311778;311779;311780;311781;311782;311783;311784;311785;311786;311787;311788;311789;311790;311791;311792;311793;311794;311795;311796;311797;311798;311799;311800;311801;311802;311803;311804;311805;311806;311807;311808;311809;311810;311811;311812;311813 311790 41 SKAEAEALYQTK Unmodified 1337.6827 0.68269519 77;960;50;109;91 CON__ENSEMBL:ENSBTAP00000038253;CON__Q9R0H5;CON__Q3SY84;Q3SY84;P12035;CON__P12035;CON__P19013;P19013 KRT71;KRT3;KRT4 Keratin, type II cytoskeletal 71;Keratin, type II cytoskeletal 3;Keratin, type II cytoskeletal 4 no no 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 25.847 26.022 3 0.0080131 28072 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 43.401 34.991 + 85430000 0 0 0 0 0 0 27098000 20164000 0 0 0 0 38168000 0 0 47162 50;109;91;960;77 42295 395235;395236;395237 311814;311815 311814 1 SKAEAESLYQSK Unmodified 1339.662 0.66195975 780 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.89 2.73 4 1 30 4 1 2 3 3 2 2 3 3 2 4 2 2 2 21.62 21.357 2;3 1.4597E-74 21782 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 251.75 218.03 + 31288000000 0 314060000 6886300 3529100000 1553700000 626370000 1555300000 8497700000 810750000 2242500000 1963600000 6592800000 2294100000 851380000 449630000 47163 780 42296 395238;395239;395240;395241;395242;395243;395244;395245;395246;395247;395248;395249;395250;395251;395252;395253;395254;395255;395256;395257;395258;395259;395260;395261;395262;395263;395264;395265;395266;395267;395268;395269;395270;395271;395272 311816;311817;311818;311819;311820;311821;311822;311823;311824;311825;311826;311827;311828;311829;311830;311831;311832;311833;311834;311835;311836;311837;311838;311839;311840;311841;311842;311843;311844;311845;311846;311847;311848;311849;311850;311851;311852;311853;311854 311829 30 SKAEAESLYQSKYEELQITAGR Unmodified 2500.2445 0.24454697 780 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 2 By MS/MS By MS/MS By MS/MS 10 0 7 3 2 2 67.112 67.348 3;4 4.9925E-19 76894 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 86.856 83.394 + 189410000 0 0 0 0 0 0 0 56099000 0 0 0 122840000 10470000 0 0 47164 780 42297 395273;395274;395275;395276;395277;395278;395279 311855;311856;311857;311858;311859;311860;311861;311862;311863;311864;311865 311857 9 SKDDQVTVIGAGVTLHEALAAAELLK Unmodified 2648.4385 0.43849575 1249 P29401 TKT Transketolase yes yes 0 0 1 By MS/MS By MS/MS 2.4 0.49 3 2 2 3 99.303 94.417 4 2.1296E-25 117716 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.646 89.181 151500000 79888000 71612000 0 0 0 0 0 0 0 0 0 0 0 0 0 47165 1249 42298 395280;395281;395282;395283;395284 311866;311867;311868;311869;311870;311871 311871 6 SKDEAEALYQTK Unmodified 1381.6725 0.67252444 103 CON__Q7Z794;Q7Z794 KRT77 Keratin, type II cytoskeletal 1b no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 2 2 1 2 2 2 2 2 2 1 2 28.561 28.708 2;3 4.8433E-08 31453 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 172.74 161.58 + 371270000 0 0 0 68606000 10246000 2851800 25222000 26780000 6632900 60457000 22767000 130760000 6592500 10350000 0 47166 103 42299 395285;395286;395287;395288;395289;395290;395291;395292;395293;395294;395295;395296;395297;395298;395299;395300;395301;395302;395303;395304 311872;311873;311874;311875;311876;311877;311878;311879;311880;311881 311880 6 SKEDGEVVQEEEVCAK Unmodified 1834.8255 0.82547262 4574 Q9NQS1 AVEN Cell death regulator Aven yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 6 1 1 1 1 1 1 31.607 32.16 3 0.0018481 34933 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 46.892 35.249 18315000 0 0 0 0 0 0 0 0 0 0 7123300 5069200 0 2394100 3728600 47167 4574 42300 395305;395306;395307;395308;395309;395310 311882;311883;311884 311883 3 SKEEAEALYHSK Unmodified 1390.6729 0.67285879 79 CON__P35908v2;P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 30 3 3 2 3 3 2 2 3 2 2 3 2 18.468 18.638 2;3 6.4968E-134 19007 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 218.62 191.95 + 12067000000 0 0 0 1619300000 1063600000 571100000 446360000 1388700000 557630000 895200000 959330000 3046600000 877710000 372300000 269120000 47168 79 42301 395311;395312;395313;395314;395315;395316;395317;395318;395319;395320;395321;395322;395323;395324;395325;395326;395327;395328;395329;395330;395331;395332;395333;395334;395335;395336;395337;395338;395339;395340 311885;311886;311887;311888;311889;311890;311891;311892;311893;311894;311895;311896;311897;311898;311899;311900;311901;311902;311903;311904;311905;311906;311907;311908;311909;311910;311911;311912;311913;311914;311915;311916;311917;311918;311919 311887 32 SKEEESVHVTQR Unmodified 1427.7005 0.70047052 4837 Q9UBD5 ORC3 Origin recognition complex subunit 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 10.112 10.244 3 0.0062441 9115 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 63.76 53.708 40804000 0 0 0 2403200 2286300 1569800 3308600 2025700 1280100 2804800 5232300 7689600 4394100 3446500 4362400 47169 4837 42302 395341;395342;395343;395344;395345;395346;395347;395348;395349;395350;395351;395352 311920;311921;311922;311923;311924;311925;311926 311921 4 SKEEESVHVTQRK Unmodified 1555.7954 0.79543354 4837 Q9UBD5 ORC3 Origin recognition complex subunit 3 yes yes 0 0 2 By MS/MS 2 0 1 1 10.493 6.7182 3 0.043328 10912 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.29 42.545 26341000 26341000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47170 4837 42303 395353 311927 311927 1 SKEEYQQTWYHEGPNSLK Unmodified 2223.0233 0.023261223 303 O43172 PRPF4 U4/U6 small nuclear ribonucleoprotein Prp4 yes yes 0 0 1 By MS/MS 2 0 2 2 59.056 50.83 3;4 0.010303 69124 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.621 39.52 7152900 7152900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47171 303 42304 395354;395355 311928;311929 311929 2 SKFDNLYGCR Unmodified 1258.5765 0.57645598 1164 P23526 AHCY Adenosylhomocysteinase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 38.02 38.37 3 0.0073625 41237 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.958 40.979 33719000 0 0 0 4256200 0 0 0 0 0 0 6900500 6262800 0 4925700 11374000 47172 1164 42305 395356;395357;395358;395359;395360 311930 311930 1 SKFEDMAK Unmodified 954.44807 0.44806757 1207 P26583 HMGB2 High mobility group protein B2 yes yes 0 0 1 By matching By MS/MS By MS/MS 2.33 0.471 2 1 1 1 1 23.21 19.275 2 0.033311 24216 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 109.71 4.1937 84391000 28301000 11960000 44130000 0 0 0 0 0 0 0 0 0 0 0 0 47173 1207 42306 395361;395362;395363 311931;311932 311931 1 SKHEEIDLVSLEEFYK Unmodified 1964.9731 0.97312313 2343 Q13769 THOC5 THO complex subunit 5 homolog yes yes 0 0 1 By MS/MS 2 0 1 1 90.122 81.992 3 0.00087121 106480 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.215 52.553 8607900 8607900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47174 2343 42307 395364 311933 311933 1 SKIETEIK Unmodified 946.53351 0.53351176 4497 Q9HB71 CACYBP Calcyclin-binding protein yes yes 0 0 1 By MS/MS 3 0 1 1 22.024 18.136 2 0.04745 22664 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 131.06 63.081 12159000 0 12159000 0 0 0 0 0 0 0 0 0 0 0 0 0 47175 4497 42308 395365 311934 311934 1 SKLAEIEEIK Unmodified 1158.6496 0.64960415 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 1 By matching By matching By matching By matching By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 40.606 40.562 3 0.041656 44935 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 38.75 12.705 31502000 0 0 0 3529800 2880600 8182500 4208200 4505800 2688600 0 0 0 0 5506900 0 47176 2495 42309 395366;395367;395368;395369;395370;395371;395372 311935 311935 0 SKPELPPGLSPEATAPVTPSRPEGGEPGLSK Unmodified 3081.5982 0.59824387 4112 Q9BRP8 WIBG Partner of Y14 and mago yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 6.44 3.98 4 5 1 1 2 1 1 1 1 1 74.193 72.237 3;4 3.8149E-50 88531 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 101.37 95.338 217950000 21072000 20473000 123070000 0 0 0 3563400 0 0 6144500 15261000 16730000 0 11636000 0 47177 4112 42310 395373;395374;395375;395376;395377;395378;395379;395380;395381 311936;311937;311938;311939;311940;311941;311942;311943;311944;311945;311946 311941 11 SKPGAAMVEMADGYAVDR 2 Oxidation (M) 1898.8502 0.85024758 1008 P14866 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes yes 0 2 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 2 2 2 2 2 2 2 1 2 39.071 39.23 3 8.982E-06 43138 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 70.986 67.324 294320000 0 0 0 14930000 12540000 29950000 29011000 10503000 18373000 37719000 44099000 41107000 0 10425000 45666000 47178 1008 42311 395382;395383;395384;395385;395386;395387;395388;395389;395390;395391;395392;395393;395394;395395;395396;395397;395398;395399;395400;395401;395402 311947;311948;311949;311950;311951;311952;311953;311954;311955;311956;311957 311953 1384;1385 11 SKPGAAMVEMADGYAVDR Unmodified 1866.8604 0.86041834 1008 P14866 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 66.813 67.04 3 0.0029888 76768 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 24.679 15.515 57961000 0 0 0 0 0 3362900 0 5080800 2138300 5893200 4410700 5542200 1462600 5090400 24980000 47179 1008 42311 395403;395404;395405;395406;395407;395408;395409;395410;395411 311958;311959;311960;311961 311960 4 SKPGAAMVEMADGYAVDR Oxidation (M) 1882.8553 0.85533296 1008 P14866 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes yes 0 1 1 By matching By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 53.624 53.467 3 0.00052988 60375 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 47.088 44.191 28916000 0 0 0 2636800 3172600 0 7066800 7614200 0 8425100 0 0 0 0 0 47180 1008 42311 395412;395413;395414;395415;395416 311962 311962 1384;1385 1 SKPIPIMPASPQK Oxidation (M) 1408.7748 0.77482144 154 O00429 DNM1L Dynamin-1-like protein yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By matching By matching By matching 8.67 2.98 1 5 1 1 1 1 1 1 37.71 36.688 3 0.0011265 51471 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.192 69.436 93711000 39075000 0 0 8754800 0 13184000 0 0 0 12582000 0 0 0 9218600 10896000 47181 154 42312 395417;395418;395419;395420;395421;395422 311963;311964 311964 219 2 SKPIPIMPASPQK Unmodified 1392.7799 0.77990682 154 O00429 DNM1L Dynamin-1-like protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.77 2.89 2 11 1 1 1 1 1 1 1 1 2 1 1 1 50.887 49.989 2;3 0.0040219 66898 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 48.527 36.107 419800000 83422000 19657000 0 9678300 9514700 71367000 0 46427000 0 18468000 19336000 93048000 11160000 14041000 23683000 47182 154 42312 395423;395424;395425;395426;395427;395428;395429;395430;395431;395432;395433;395434;395435 311965;311966;311967;311968;311969;311970;311971 311966 4 SKPVETPPEQNGTLTSQPNNR Unmodified 2293.1299 0.12985156 683 O95721 SNAP29 Synaptosomal-associated protein 29 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.092 34.275 3 5.2359E-38 37191 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 110.38 100.82 139400000 0 0 0 7057200 8616200 7728100 4688700 8718500 8384800 10069000 20100000 22870000 8685900 12379000 20103000 47183 683 42313 395436;395437;395438;395439;395440;395441;395442;395443;395444;395445;395446;395447 311972;311973;311974;311975;311976;311977;311978;311979;311980;311981;311982;311983;311984 311978 13 SKPVETPPEQNGTLTSQPNNRLK Unmodified 2534.3089 0.30887856 683 O95721 SNAP29 Synaptosomal-associated protein 29 yes yes 0 0 2 By MS/MS 2 0 2 2 46.257 39.266 3;4 0.00084231 53695 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.511 39.224 49396000 49396000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47184 683 42314 395448;395449 311985;311986;311987 311986 3 SKVDEAVAVLQAHQAK Unmodified 1692.9159 0.91588303 958 P11940;Q9H361 PABPC1;PABPC3 Polyadenylate-binding protein 1;Polyadenylate-binding protein 3 yes no 0 0 1 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 57.295 57.421 3 0.00033778 64849 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 49.535 38.591 48018000 0 0 0 0 2822000 3663600 6478300 0 0 6878200 9741100 18435000 0 0 0 47185 958 42315 395450;395451;395452;395453;395454;395455 311988;311989;311990;311991;311992;311993 311992 6 SKVDQIQEIVTGNPTVIK Unmodified 1968.0892 0.089155943 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76.802 76.087 3 0.00020767 88008 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 41.485 30.414 292880000 58406000 0 10396000 7538000 14350000 14076000 16416000 21162000 12337000 31844000 24439000 26619000 11431000 14071000 29799000 47186 1518 42316 395456;395457;395458;395459;395460;395461;395462;395463;395464;395465;395466;395467;395468;395469 311994;311995;311996;311997;311998;311999;312000;312001;312002;312003;312004;312005;312006 312005 13 SKVEDKPFEETGVEPVLETASSSAHSTQK Unmodified 3116.515 0.51496775 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 2 By MS/MS 2 0 1 1 72.008 68.725 4 0.0017009 84340 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 30.602 12.808 6012800 0 0 6012800 0 0 0 0 0 0 0 0 0 0 0 0 47187 3443 42317 395470 312007 312007 1 SKYEDEINKR Unmodified 1280.6361 0.63607935 103;80 CON__Q7Z794;Q7Z794;CON__P50446 KRT77 Keratin, type II cytoskeletal 1b no no 0 0 2 By MS/MS 10 0 1 1 14.981 14.845 3 0.03339 14484 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 83.081 70.126 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47188 103;80 42318 395471 312008 312008 1 SKYEEEAHR Unmodified 1147.5258 0.52580062 100 CON__Q7RTT2;CON__Q8N1N4-2;Q8N1N4 KRT78 Keratin, type II cytoskeletal 78 yes no 0 0 1 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 5.9285 6.0263 3 0.043245 3838 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 38.75 33.437 + 26397000 0 0 0 9042600 1767500 1205600 1964500 8521900 874960 0 0 0 1983400 547450 489070 47189 100 42319 395472;395473;395474;395475;395476;395477;395478;395479;395480 312009 312009 1 SKYEEEAHRR Unmodified 1303.6269 0.62691165 100 CON__Q7RTT2;CON__Q8N1N4-2;Q8N1N4 KRT78 Keratin, type II cytoskeletal 78 yes no 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 5.7167 5.8341 3 0.0047289 3512 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 108.43 59.83 + 130630000 0 0 0 31103000 3392500 4677100 6473800 30880000 5008300 8510900 4884700 16509000 8711800 4145800 6334400 47190 100 42320 395481;395482;395483;395484;395485;395486;395487;395488;395489;395490;395491;395492 312010;312011;312012 312010 3 SLAAEEEAAR Unmodified 1045.504 0.50400254 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 23.425 23.713 2 0.0063431 24318 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 65.305 45.519 112840000 0 0 0 0 0 0 10943000 13841000 7846800 13415000 11723000 0 19242000 12405000 23425000 47191 2501 42321 395493;395494;395495;395496;395497;395498;395499;395500;395501 312013;312014;312015;312016;312017 312015 5 SLAAEEEAARQRK Unmodified 1457.7587 0.7586541 2501 Q15149 PLEC Plectin yes yes 0 0 2 By MS/MS 2 0 1 1 27.804 22.415 3 0.022365 31617 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 39.016 15.64 59142000 59142000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47192 2501 42322 395502 312018 312018 0 SLAAPPALEK Unmodified 995.56515 0.56514624 4494 Q9HB19 PLEKHA2 Pleckstrin homology domain-containing family A member 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 50.172 49.065 2 0.010295 55501 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 56.258 26.882 117310000 0 60564000 0 6079600 6443600 0 0 6106900 0 0 8248600 0 8537800 6388600 14946000 47193 4494 42323 395503;395504;395505;395506;395507;395508;395509;395510;395511 312019;312020;312021;312022;312023;312024 312020 6 SLAAQEPASVLEEAR Unmodified 1569.7999 0.79985021 2282 Q13415 ORC1 Origin recognition complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.201 69.279 2 5.5326E-23 79391 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 141.37 125.78 157290000 0 0 0 6795800 11849000 11075000 11466000 11702000 10593000 12935000 16141000 22073000 12480000 11879000 18298000 47194 2282 42324 395512;395513;395514;395515;395516;395517;395518;395519;395520;395521;395522;395523 312025;312026;312027;312028;312029;312030;312031;312032;312033;312034;312035;312036 312034 12 SLADCNFSYTSSR Unmodified 1506.6409 0.64090673 2966 Q6R327 RICTOR Rapamycin-insensitive companion of mTOR yes yes 0 0 0 By MS/MS 10 0 1 1 51.439 52.144 2 0.00058284 58592 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 90.685 65.299 4440400 0 0 0 0 0 0 0 0 0 0 0 4440400 0 0 0 47195 2966 42325 395524 312037 312037 1 SLADELALVDVLEDK Unmodified 1628.8509 0.85088273 836 P07195 LDHB L-lactate dehydrogenase B chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2.9 2.28 3 43 15 6 19 32 10 2 1 1 2 101.02 97.325 2;3 1.136E-56 116370 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 202.44 185.07 53276000000 24055000000 27148000000 1991700000 0 0 0 0 0 0 0 13191000 4087400 0 2231600 62409000 47196 836 42326 395525;395526;395527;395528;395529;395530;395531;395532;395533;395534;395535;395536;395537;395538;395539;395540;395541;395542;395543;395544;395545;395546;395547;395548;395549;395550;395551;395552;395553;395554;395555;395556;395557;395558;395559;395560;395561;395562;395563;395564;395565;395566;395567;395568;395569;395570;395571;395572;395573;395574;395575;395576;395577;395578;395579;395580;395581;395582;395583;395584;395585;395586;395587;395588;395589;395590;395591 312038;312039;312040;312041;312042;312043;312044;312045;312046;312047;312048;312049;312050;312051;312052;312053;312054;312055;312056;312057;312058;312059;312060;312061;312062;312063;312064;312065;312066;312067;312068;312069;312070;312071;312072;312073;312074;312075;312076;312077;312078;312079;312080;312081;312082;312083;312084;312085;312086;312087;312088;312089;312090;312091;312092;312093;312094;312095;312096;312097;312098;312099;312100;312101;312102;312103;312104;312105;312106;312107;312108;312109;312110;312111;312112;312113;312114;312115;312116;312117;312118;312119;312120;312121;312122;312123;312124;312125;312126;312127;312128;312129;312130;312131;312132;312133;312134;312135;312136;312137;312138;312139;312140;312141;312142;312143;312144;312145;312146;312147;312148;312149 312116 104 SLADFEK Unmodified 808.39668 0.39668393 129 O00231 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.991 39.172 2 0.02468 43287 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 82.305 52.463 810520000 0 0 0 53898000 62591000 74287000 26543000 22574000 20655000 120710000 137190000 160220000 29401000 31547000 70907000 47197 129 42327 395592;395593;395594;395595;395596;395597;395598;395599;395600;395601;395602;395603 312150;312151;312152 312151 3 SLADGILLCK Unmodified 1088.59 0.58998078 2421 Q14651 PLS1 Plastin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 75.445 74.328 2 0.0075828 92954 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.906 44.551 83559000 0 68430000 2160700 0 0 2658900 0 0 0 0 0 3041200 0 2034300 5234000 47198 2421 42328 395604;395605;395606;395607;395608;395609 312153;312154;312155;312156;312157 312154 5 SLADIAREEASNFR Unmodified 1577.7798 0.77978347 1195 P25788 PSMA3 Proteasome subunit alpha type-3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 2 79.337 79.499 2;3 1.3069E-22 91467 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 119.96 101.37 110420000 0 0 0 0 0 3437300 0 0 0 0 5062700 9350000 0 7699700 84871000 47199 1195 42329 395610;395611;395612;395613;395614;395615 312158;312159;312160;312161;312162;312163 312158 6 SLADIEEEYNYGFVVEK Unmodified 2003.9364 0.93640328 3826 Q96EY5 MVB12A Multivesicular body subunit 12A yes yes 0 0 0 By MS/MS 2 0 1 1 90.64 82.509 2 4.117E-14 107102 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 113.24 101.66 7399900 7399900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47200 3826 42330 395616 312164 312164 1 SLADLFR Unmodified 820.4443 0.44430282 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.984 79.043 2 0.039725 90769 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.915 23.033 55887000 0 0 0 3164900 1635300 2869800 2714700 4213100 2634500 3703000 3796900 8546500 4236100 5244800 13128000 47201 645 42331 395617;395618;395619;395620;395621;395622;395623;395624;395625;395626;395627;395628 312165 312165 1 SLADLPNFTPFPDEWTVEDK Unmodified 2320.0899 0.089943804 4971;4820 Q9P2K3;Q9UKL0 RCOR3;RCOR1 REST corepressor 3;REST corepressor 1 no no 0 0 0 By MS/MS By MS/MS 2.5 0.5 2 2 2 2 97.465 94.584 2;3 3.4427E-06 114783 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 83.047 71.071 15820000 0 10145000 5674400 0 0 0 0 0 0 0 0 0 0 0 0 47202 4820;4971 42332 395629;395630;395631;395632 312166;312167;312168;312169 312168 4 SLADVESQVSAQNK Unmodified 1474.7264 0.72635092 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 6.25 3.77 1 1 2 2 1 1 52.949 49.174 2 3.6521E-44 62701 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 171.62 142.89 51472000 0 48007000 0 3464600 0 0 0 0 0 0 0 0 0 0 0 47203 2446 42333 395633;395634;395635;395636 312170;312171;312172 312171 3 SLAEACSDGDVNAVRK Unmodified 1690.7944 0.79444726 3250 Q8IWZ3 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.064 32.251 3 2.9889E-21 34633 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 93.909 85.934 208280000 0 0 0 9802500 12270000 11546000 19423000 19684000 15645000 11983000 19637000 18707000 26535000 19103000 23948000 47204 3250 42334 395637;395638;395639;395640;395641;395642;395643;395644;395645;395646;395647;395648 312173;312174;312175;312176;312177 312177 4 SLAEACSEGDVNAVRK Unmodified 1704.8101 0.81009732 472 O75179 ANKRD17 Ankyrin repeat domain-containing protein 17 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 2 1 1 2 1 1 2 1 2 2 2 1 33.986 34.18 2;3 1.3367E-29 37615 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 143.38 132.32 322770000 0 0 0 18265000 19628000 16433000 23599000 20483000 14782000 31121000 36975000 41270000 50482000 40571000 9161400 47205 472 42335 395649;395650;395651;395652;395653;395654;395655;395656;395657;395658;395659;395660;395661;395662;395663;395664;395665;395666 312178;312179;312180;312181;312182;312183;312184;312185;312186;312187;312188;312189;312190;312191;312192;312193;312194;312195;312196;312197;312198;312199 312194 22 SLAEDFAEQPIK Unmodified 1346.6718 0.67179615 5206 Q9Y4L1 HYOU1 Hypoxia up-regulated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.293 68.371 2 0.00071935 78449 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 90.108 72.049 197800000 0 0 0 7349400 6990500 18727000 8020800 10697000 6142300 18926000 22843000 23324000 13648000 20335000 40792000 47206 5206 42336 395667;395668;395669;395670;395671;395672;395673;395674;395675;395676;395677;395678 312200;312201;312202;312203;312204;312205;312206;312207;312208;312209;312210;312211;312212 312200 13 SLAEGNLLYQPQLDTLK Unmodified 1902.0098 0.0098429899 4473 Q9H9H4 VPS37B Vacuolar protein sorting-associated protein 37B yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 83.893 84.039 2 8.6945E-14 96965 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.417 79.661 21071000 0 0 0 0 0 0 0 0 0 5676000 0 0 0 0 15395000 47207 4473 42337 395679;395680 312213 312213 1 SLAEGYFDAAGR Unmodified 1255.5833 0.5833155 370 O43813 LANCL1 LanC-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.774 61.873 2 0.0002069 71404 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 98.249 79.937 165750000 0 0 0 7593200 6179700 10134000 6905300 8372000 7904700 12957000 21120000 19778000 9913900 13520000 41375000 47208 370 42338 395681;395682;395683;395684;395685;395686;395687;395688;395689;395690;395691;395692 312214;312215;312216;312217;312218;312219;312220;312221;312222;312223;312224;312225;312226 312225 13 SLAEHRTPDVLK Unmodified 1364.7412 0.74121312 1313 P31948 STIP1 Stress-induced-phosphoprotein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.17 3.85 4 2 6 3 2 1 1 1 1 1 1 1 36.182 33.704 2;3 0.0031091 49141 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.563 55.191 1967400000 1630000000 118650000 24180000 0 3698800 0 0 0 0 0 28095000 36956000 10371000 26653000 88784000 47209 1313 42339 395693;395694;395695;395696;395697;395698;395699;395700;395701;395702;395703;395704 312227;312228;312229;312230;312231;312232;312233;312234;312235;312236 312231 8 SLAEQRQHEEANK Unmodified 1538.7437 0.74373232 505 O75475 PSIP1 PC4 and SFRS1-interacting protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 6.5241 6.1425 3 2.5066E-08 3710 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 105.65 87.195 723360000 540300000 0 92981000 7184700 6215200 0 16738000 5290500 12664000 7757500 0 9003200 11403000 7995400 5827700 47210 505 42340 395705;395706;395707;395708;395709;395710;395711;395712;395713;395714;395715;395716;395717 312237;312238;312239;312240;312241;312242;312243;312244;312245;312246;312247;312248;312249 312239 13 SLAESELR Unmodified 903.46616 0.46616048 2053 Q01433 AMPD2 AMP deaminase 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 29.982 30.22 2 0.0096391 32319 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 82.241 34.325 102610000 0 0 0 0 4126600 5813900 5837600 5684900 5535500 7365700 11441000 14109000 8830200 11325000 22542000 47211 2053 42341 395718;395719;395720;395721;395722;395723;395724;395725;395726;395727;395728 312250;312251;312252;312253;312254;312255 312253 6 SLAGAAQILLK Unmodified 1083.6652 0.66519463 4664 Q9NVC6 MED17 Mediator of RNA polymerase II transcription subunit 17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 81.085 80.147 2 0.00064287 91949 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 78.516 49.043 49412000 10843000 0 0 0 3006100 0 3023400 4512100 0 0 8375500 7896300 4059600 7696100 0 47212 4664 42342 395729;395730;395731;395732;395733;395734;395735;395736 312256;312257;312258;312259;312260;312261;312262;312263 312260 8 SLAGFQESILTDK Unmodified 1407.7246 0.72456001 2005 P83436 COG7 Conserved oligomeric Golgi complex subunit 7 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 77.841 77.931 2 0.00058325 90386 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 77.062 64.106 10822000 0 0 0 0 0 0 0 0 0 7424000 0 0 3398300 0 0 47213 2005 42343 395737;395738 312264;312265 312265 2 SLAGGRAPR Acetyl (Protein N-term) 925.50936 0.50936269 2592 Q15906 VPS72 Vacuolar protein sorting-associated protein 72 homolog yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.332 23.536 2 0.0061627 24475 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 76.478 47.061 133350000 0 0 0 8174500 7125500 6929700 10808000 9716500 9759300 13077000 12741000 17206000 12280000 11005000 14528000 47214 2592 42344 395739;395740;395741;395742;395743;395744;395745;395746;395747;395748;395749;395750 312266;312267;312268;312269;312270;312271;312272;312273;312274;312275;312276 312274 7 SLAGPGTEPDK Unmodified 1070.5244 0.52440364 2993 Q6XZF7 DNMBP Dynamin-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 21.372 21.25 2 0.00045476 25932 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.52 71.727 156830000 0 52788000 0 6529600 6325500 9738700 10448000 8556900 5148200 8408700 10357000 11629000 8761200 8588200 9550500 47215 2993 42345 395751;395752;395753;395754;395755;395756;395757;395758;395759;395760;395761;395762;395763 312277;312278;312279;312280;312281;312282;312283;312284;312285;312286;312287;312288 312280 10 SLAGSSGPGASSGTSGDHGELVVR Unmodified 2184.0407 0.040702201 1255 P29692 EEF1D Elongation factor 1-delta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 1 1 2 1 1 2 2 2 2 2 2 44.474 44.728 2;3 1.4807E-233 49343 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 221.14 188.98 2463700000 0 0 0 84882000 73594000 162860000 154130000 85947000 70839000 202350000 323570000 317470000 211740000 236340000 540020000 47216 1255 42346 395764;395765;395766;395767;395768;395769;395770;395771;395772;395773;395774;395775;395776;395777;395778;395779;395780;395781;395782 312289;312290;312291;312292;312293;312294;312295;312296;312297;312298;312299;312300;312301;312302;312303;312304;312305;312306;312307;312308;312309;312310;312311;312312;312313;312314;312315;312316;312317;312318;312319 312311 31 SLAKPETDK Unmodified 987.52368 0.52367535 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 10.035 6.8508 2 0.0080464 8929 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 131.44 69.761 204120000 25427000 172480000 6213500 0 0 0 0 0 0 0 0 0 0 0 0 47217 1564 42347 395783;395784;395785;395786 312320;312321;312322;312323 312321 3 SLAKPETDKEQDSEMEK Unmodified 1963.9045 0.90445122 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.24 2.35 2 19 1 1 2 2 2 2 2 2 1 2 2 2 20.434 20.245 3;4 0.0012797 20455 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 71.143 65.418 108890000 9927600 0 3372300 6230500 3645000 0 5423300 4640800 0 8172600 18024000 9097300 6135100 8659900 25565000 47218 1564 42348 395787;395788;395789;395790;395791;395792;395793;395794;395795;395796;395797;395798;395799;395800;395801;395802;395803;395804;395805;395806;395807 312324;312325;312326;312327 312327 4 SLAKPETDKEQDSEMEK Oxidation (M) 1979.8994 0.89936584 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 1 2 By MS/MS By MS/MS 2 0 2 1 1 15.597 12.34 3 0.0088992 15691 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 42.818 36.703 31004000 25566000 0 5438300 0 0 0 0 0 0 0 0 0 0 0 0 47219 1564 42348 395808;395809 312328;312329 312329 2488 1 SLALDIVDEDVK Unmodified 1315.6871 0.68711187 917 P10244 MYBL2 Myb-related protein B yes yes 0 0 0 By MS/MS 2 0 1 1 84.426 79.682 2 0.003542 99180 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.616 69.841 12676000 0 12676000 0 0 0 0 0 0 0 0 0 0 0 0 0 47220 917 42349 395810 312330 312330 1 SLALMYESEK Oxidation (M) 1185.5587 0.55874023 683 O95721 SNAP29 Synaptosomal-associated protein 29 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 46.796 47.156 2 0.0065365 53117 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 56.916 40.376 44309000 0 0 0 0 0 0 5401700 0 2766100 3914300 5922700 10377000 6702900 3805100 5418800 47221 683 42350 395811;395812;395813;395814;395815;395816;395817;395818 312331;312332;312333;312334;312335;312336 312336 824 6 SLALMYESEK Unmodified 1169.5638 0.56382561 683 O95721 SNAP29 Synaptosomal-associated protein 29 yes yes 0 0 0 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 58.237 58.672 2 0.01138 66042 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.962 42.807 37395000 0 0 0 0 0 0 0 0 0 0 6465500 9266700 3051600 0 18611000 47222 683 42350 395819;395820;395821;395822 312337 312337 1 SLAMEMVLTGDRISAQDAK Oxidation (M) 2051.0027 0.0027254765 1267 P30084 ECHS1 Enoyl-CoA hydratase, mitochondrial yes yes 0 1 1 By MS/MS 2 0 1 1 80.149 72.019 3 8.9666E-05 94479 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.47 45.422 11707000 11707000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47223 1267 42351 395823 312338 312338 1869 1 SLAMEMVLTGDRISAQDAK Unmodified 2035.0078 0.0078108544 1267 P30084 ECHS1 Enoyl-CoA hydratase, mitochondrial yes yes 0 0 1 By MS/MS 2 0 1 1 88.462 80.331 3 0.0010537 104578 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.68 32.487 10960000 10960000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47224 1267 42351 395824 312339 312339 1 SLAMLGSSEDNTALSR Oxidation (M) 1666.7832 0.78321387 2323 Q13596 SNX1 Sorting nexin-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.42 1.93 1 11 1 1 1 1 1 1 1 1 1 1 1 1 55.671 55.443 2 1.7301E-23 62797 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 118.87 105.27 118480000 0 4980800 0 6956000 0 8126700 11107000 6556900 4577900 12798000 17451000 16102000 8752500 8063300 13009000 47225 2323 42352 395825;395826;395827;395828;395829;395830;395831;395832;395833;395834;395835;395836 312340;312341;312342;312343;312344;312345;312346;312347;312348;312349;312350;312351 312346 3788 11 SLAMLGSSEDNTALSR Unmodified 1650.7883 0.78829925 2323 Q13596 SNX1 Sorting nexin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 66.709 66.786 2 7.7274E-20 76354 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 136.7 94.303 90475000 0 0 0 3048000 4049300 11592000 4808000 6228800 0 10479000 9327800 8828500 8526600 7237000 16350000 47226 2323 42352 395837;395838;395839;395840;395841;395842;395843;395844;395845;395846;395847 312352;312353;312354;312355;312356;312357;312358;312359;312360;312361;312362;312363;312364 312361 12 SLANAESQQQREQLER Unmodified 1885.9242 0.92421588 4519 Q9HCN4 GPN1 GPN-loop GTPase 1 yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 29.532 29.687 3 0.0014635 31166 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 41.378 24.979 22221000 0 0 0 0 1412600 0 4031300 3116700 0 0 4585300 0 5835700 3239400 0 47227 4519 42353 395848;395849;395850;395851;395852;395853 312365;312366 312366 2 SLANLNLNNMLDK Oxidation (M) 1474.745 0.74497787 1531 P47974 ZFP36L2 Zinc finger protein 36, C3H1 type-like 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 69.91 70.093 2 0.00054169 79877 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.815 51.504 35678000 0 0 0 0 0 5939100 7240900 0 0 5430300 5968700 0 2615000 4557700 3926700 47228 1531 42354 395854;395855;395856;395857;395858;395859;395860 312367;312368;312369;312370;312371;312372;312373 312370 2431 6 SLANLNLNNMLDK Unmodified 1458.7501 0.75006325 1531 P47974 ZFP36L2 Zinc finger protein 36, C3H1 type-like 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 82.765 82.924 2 2.9511E-08 95152 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 107.06 91.393 17776000 0 0 0 0 0 0 1256200 2972400 1873400 3174800 2930900 0 0 5568200 0 47229 1531 42354 395861;395862;395863;395864;395865;395866;395867 312374;312375;312376;312377 312377 4 SLAPAPLSTK Unmodified 983.56515 0.56514624 1973 P78337 PITX1 Pituitary homeobox 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 43.586 43.9 2 0.035327 48038 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 67.993 40.468 265780000 0 0 0 0 0 14845000 26458000 21568000 26018000 31011000 37891000 39561000 20115000 18701000 29616000 47230 1973 42355 395868;395869;395870;395871;395872;395873;395874;395875;395876;395877 312378;312379 312379 0 SLAPEPVQITPPAPSAQQSWAQAFGGSQGNSNSSSSR Unmodified 3725.767 0.76699354 2867 Q6BDS2 UHRF1BP1 UHRF1-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 87.067 87.221 3 6.5248E-10 100971 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 34.044 32.095 9152800 0 0 0 0 0 0 0 1857100 0 3652700 0 0 0 0 3642900 47231 2867 42356 395878;395879;395880 312380;312381 312381 2 SLAPSIHGHDYVK Unmodified 1422.7256 0.72556306 1183 P25205 MCM3 DNA replication licensing factor MCM3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 5.73 3.91 5 1 5 3 1 2 1 1 1 1 1 41.813 38.872 2;3 6.5654E-10 56154 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 141.08 106.7 997700000 765520000 24020000 54770000 0 0 0 0 27437000 17431000 26980000 0 0 0 25181000 56361000 47232 1183 42357 395881;395882;395883;395884;395885;395886;395887;395888;395889;395890;395891 312382;312383;312384;312385;312386;312387;312388;312389;312390;312391 312387 9 SLAQAEAEK Unmodified 945.47673 0.47672516 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS 10 0 1 1 14.542 14.36 2 0.011336 13457 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 62.969 13.527 32835000 0 0 0 0 32835000 0 0 0 0 0 0 0 0 0 0 47233 2501 42358 395892 312392 312392 1 SLAQHPSALR Unmodified 1078.5883 0.5883413 2959 Q6PJG6 BRAT1 BRCA1-associated ATM activator 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 21.681 21.885 2 0.020509 22763 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 47.198 19.024 16741000 0 0 0 0 0 5099000 0 0 0 3975400 0 0 3771200 3895700 0 47234 2959 42359 395893;395894;395895;395896 312393 312393 1 SLAQPATTTAR Unmodified 1115.5935 0.59348625 3035 Q765P7 MTSS1L MTSS1-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 21.991 22.216 2 0.00047709 22734 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 83.998 18.746 77790000 0 0 0 5275500 4936100 6593200 0 4906100 0 11541000 12719000 11341000 7672700 0 12806000 47235 3035 42360 395897;395898;395899;395900;395901;395902;395903;395904;395905 312394;312395;312396;312397;312398;312399;312400;312401 312399 8 SLAQREAEYAEARK Unmodified 1620.822 0.82198264 3092 Q7Z422 SZRD1 SUZ domain-containing protein 1 yes yes 0 0 2 By MS/MS 2 0 1 1 38.808 32.246 3 0.0052926 44737 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.561 76.646 31843000 31843000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47236 3092 42361 395906 312402 312402 1 SLASDITDEQK Unmodified 1205.5776 0.57756142 1032 P16083 NQO2 Ribosyldihydronicotinamide dehydrogenase [quinone] yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 42.485 41.924 2 2.9238E-05 46473 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 118.71 56.749 232310000 0 67719000 0 5020000 0 3730400 0 0 0 4755200 31659000 32035000 0 0 87390000 47237 1032 42362 395907;395908;395909;395910;395911;395912;395913 312403;312404;312405;312406;312407;312408 312406 6 SLASPAGLQDGSAQHHPK Unmodified 1799.8915 0.89145919 4571 Q9NQG7 HPS4 Hermansky-Pudlak syndrome 4 protein yes yes 0 0 0 By MS/MS 2 0 1 1 37.825 31.328 3 0.0017936 43731 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.223 33.587 5561700 5561700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47238 4571 42363 395914 312409 312409 0 SLASSAQPGLGK Unmodified 1114.5982 0.59823728 5200 Q9Y4F5 CEP170B Centrosomal protein of 170 kDa protein B yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 32.718 32.732 2 0.037029 35738 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 35.541 4.8546 7980600 0 0 0 0 2005100 0 0 0 3131900 0 0 0 2843600 0 0 47239 5200 42364 395915;395916;395917 312410;312411 312410 2 SLATGGNVSQALALVGEK Unmodified 1713.9261 0.92611336 3324 Q8N3P4 VPS8 Vacuolar protein sorting-associated protein 8 homolog yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 87.544 81.074 2 0.00033279 103535 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.729 61.196 30907000 9508100 21399000 0 0 0 0 0 0 0 0 0 0 0 0 0 47240 3324 42365 395918;395919 312412;312413 312413 2 SLATTRPTVNADDLLK Unmodified 1713.9261 0.92611336 5026 Q9UN37 VPS4A Vacuolar protein sorting-associated protein 4A yes yes 0 0 1 By matching By MS/MS By MS/MS By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 67.99 68.045 3 0.017192 78279 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 39.91 26.208 85159000 0 0 0 0 6191600 15531000 13927000 12010000 0 21101000 0 16398000 0 0 0 47241 5026 42366 395920;395921;395922;395923;395924;395925 312414 312414 0 SLAVQRPASLEK Unmodified 1297.7354 0.73539946 1455 P42356 PI4KA Phosphatidylinositol 4-kinase alpha yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 38.127 38.376 3 0.01076 42520 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 35.204 26.899 28673000 0 0 0 0 2449200 0 2723400 0 1240000 5132000 0 3839000 4655000 4289200 4345400 47242 1455 42367 395926;395927;395928;395929;395930;395931;395932;395933 312415;312416;312417;312418 312415 4 SLAYLTAATHGLDEEAESLK Unmodified 2118.0481 0.04807899 1721 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.22 0.416 7 2 2 5 2 90.442 86.064 3 2.0416E-72 105530 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145.05 117.2 902580000 319320000 573750000 9508000 0 0 0 0 0 0 0 0 0 0 0 0 47243 1721 42368 395934;395935;395936;395937;395938;395939;395940;395941;395942 312419;312420;312421;312422;312423;312424;312425;312426;312427;312428 312419 9 SLAYVDNILK Unmodified 1134.6285 0.62847478 2604 Q16513 PKN2 Serine/threonine-protein kinase N2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 79.306 78.532 2 0.0060165 90728 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 66.621 43.193 500680000 0 263220000 9671400 10651000 13780000 17883000 15699000 15323000 14535000 28368000 19030000 20199000 16070000 15835000 40414000 47244 2604 42369 395943;395944;395945;395946;395947;395948;395949;395950;395951;395952;395953;395954;395955;395956;395957;395958 312429;312430;312431;312432;312433;312434;312435;312436;312437;312438;312439;312440;312441;312442 312440 14 SLCLSPSEASQMK Unmodified 1436.664 0.66395036 4345 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 56.876 57.177 2 0.0052369 64226 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.3 37.665 16755000 0 0 0 0 0 0 2686600 0 0 0 0 0 0 7655900 6412600 47245 4345 42370 395959;395960;395961 312443;312444 312443 2 SLDAFPEDFCR Unmodified 1355.5816 0.58160094 3907 Q96KG9 SCYL1 N-terminal kinase-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.392 75.451 2 0.00028318 86653 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 93.111 83.716 76474000 0 0 0 2311700 4737200 7927600 4521400 6080100 4632100 5840200 5283200 8567000 4598800 7982100 13993000 47246 3907 42371 395962;395963;395964;395965;395966;395967;395968;395969;395970;395971;395972;395973 312445;312446;312447;312448;312449;312450;312451;312452;312453;312454;312455;312456;312457;312458 312449 14 SLDAFPEDFCRHK Unmodified 1620.7355 0.73547582 3907 Q96KG9 SCYL1 N-terminal kinase-like protein yes yes 0 0 1 By MS/MS 2 0 1 1 70.519 62.252 3 0.0014058 82950 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.393 56.054 10195000 10195000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47247 3907 42372 395974 312459;312460 312459 2 SLDALGWEER Unmodified 1174.5619 0.56185177 4666 Q9NVE7 PANK4 Pantothenate kinase 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 69.65 69.401 2 0.0013675 80245 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 107.15 91.492 86474000 0 0 0 15716000 27400000 39347000 0 0 4010600 0 0 0 0 0 0 47248 4666 42373 395975;395976;395977;395978 312461;312462;312463 312463 2 SLDAPSWPGVYR Unmodified 1346.6619 0.66190017 2756 Q5SRE5 NUP188 Nucleoporin NUP188 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.471 76.569 2 2.4923E-05 88466 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 93.111 82.281 40772000 0 0 0 0 2835600 2296000 3212700 7368500 2132700 4123700 0 3800600 4178600 5369300 5454600 47249 2756 42374 395979;395980;395981;395982;395983;395984;395985;395986;395987;395988;395989 312464;312465;312466;312467;312468;312469;312470;312471 312471 8 SLDDDLDGVPLDATEDSK Unmodified 1903.8535 0.85346151 244 O15042 U2SURP U2 snRNP-associated SURP motif-containing protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 76.265 76.323 2 9.733E-21 87641 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 132.59 121.98 66824000 0 0 0 4534400 6668700 7504800 4135500 5181700 3350900 3891000 6536900 6636500 5064900 5388200 7930500 47250 244 42375 395990;395991;395992;395993;395994;395995;395996;395997;395998;395999;396000;396001;396002 312472;312473;312474;312475;312476;312477;312478;312479;312480;312481 312474 10 SLDDEVNAFK Unmodified 1136.535 0.53496832 2373 Q14141 SEPT6 Septin-6 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 60.09 59.501 2 0.0038348 68031 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 75.043 62.836 238170000 0 118720000 1052500 0 6458300 7030800 7492300 7715200 5307600 10797000 31545000 13609000 10686000 6760400 10993000 47251 2373 42376 396003;396004;396005;396006;396007;396008;396009;396010;396011;396012;396013;396014;396015 312482;312483;312484;312485;312486;312487;312488;312489 312484 4 SLDDSQCGITYK Unmodified 1385.6133 0.613295 4667 Q9NVG8 TBC1D13 TBC1 domain family member 13 yes yes 0 0 0 By MS/MS 2 0 1 1 43.195 38.047 2 0.018172 49402 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.197 64.674 39465000 0 39465000 0 0 0 0 0 0 0 0 0 0 0 0 0 47252 4667 42377 396016 312490 312490 1 SLDELEQK Unmodified 960.47639 0.47639081 299 O43156 TTI1 TELO2-interacting protein 1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 30.771 30.766 2 0.01026 33373 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 80.229 10.846 17226000 0 0 0 8508300 0 0 0 0 0 0 0 0 8717900 0 0 47253 299 42378 396017;396018;396019;396020;396021 312491;312492;312493;312494;312495 312494 5 SLDEMEK Oxidation (M) 866.36915 0.36914855 1151 P23246 SFPQ Splicing factor, proline- and glutamine-rich yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.8666 6.9902 2 0.015419 4727 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 86.866 47.648 105940000 0 0 0 5128700 5793200 7275100 11688000 4610800 6538700 9679500 13458000 11413000 7503200 9977300 12871000 47254 1151 42379 396022;396023;396024;396025;396026;396027;396028;396029;396030;396031;396032;396033 312496;312497;312498;312499;312500;312501;312502;312503 312498 1657 8 SLDFGFTIK Unmodified 1026.5386 0.53859714 3573 Q8WWI1 LMO7 LIM domain only protein 7 yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 90.382 83.896 2 0.032081 104053 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.465 23.069 22842000 5750500 17091000 0 0 0 0 0 0 0 0 0 0 0 0 0 47255 3573 42380 396034;396035 312504 312504 1 SLDFYTR Unmodified 900.43413 0.43413207 2106 Q04760 GLO1 Lactoylglutathione lyase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 50.718 51.229 2 0.016142 57304 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 116.54 41.232 200820000 0 0 0 0 0 0 0 0 0 0 29222000 27242000 0 25401000 118960000 47256 2106 42381 396036;396037;396038;396039 312505;312506;312507;312508 312508 4 SLDHQAVNFK Unmodified 1157.5829 0.58292157 473 O75182 SIN3B Paired amphipathic helix protein Sin3b yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 6.8 3.92 4 6 1 2 1 1 1 1 1 1 1 38.336 36.795 2;3 0.0032782 41191 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.1 2.3744 257790000 30452000 16291000 22490000 0 19506000 23901000 25590000 0 0 31354000 0 40972000 0 0 47231000 47257 473 42382 396040;396041;396042;396043;396044;396045;396046;396047;396048;396049 312509;312510;312511;312512;312513;312514;312515 312512 3 SLDHQGINFK Unmodified 1157.5829 0.58292157 3994 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.48 1.97 2 29 1 1 2 2 1 2 3 3 2 3 2 3 3 3 36.626 36.481 2;3 0.00089647 41529 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 118.18 9.1998 569810000 231060000 0 1065800 23682000 9907300 5633800 12657000 35107000 34122000 17668000 35033000 23132000 66529000 47175000 27037000 47258 3994 42383 396050;396051;396052;396053;396054;396055;396056;396057;396058;396059;396060;396061;396062;396063;396064;396065;396066;396067;396068;396069;396070;396071;396072;396073;396074;396075;396076;396077;396078;396079;396080 312516;312517;312518;312519;312520;312521;312522;312523;312524;312525;312526;312527;312528;312529;312530;312531;312532;312533;312534;312535 312527 14 SLDIEIPK Unmodified 913.51205 0.51204804 2929 Q6P2P2 PRMT9 Putative protein arginine N-methyltransferase 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 71.311 70.309 2 0.020925 88540 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.212 40.13 51497000 0 40815000 0 0 0 0 0 0 0 0 2790600 0 0 3180600 4710700 47259 2929 42384 396081;396082;396083;396084 312536;312537 312536 2 SLDIGNQMNVSEEMK 2 Oxidation (M) 1725.755 0.75495021 2932 Q6P3W7 SCYL2 SCY1-like protein 2 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 41.823 42.061 2 4.1901E-31 47044 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 146.07 141.27 135390000 0 0 0 7600400 0 9436300 10142000 12378000 10335000 17049000 16332000 10912000 14671000 12230000 14305000 47260 2932 42385 396085;396086;396087;396088;396089;396090;396091;396092;396093;396094;396095;396096 312538;312539;312540;312541;312542;312543;312544;312545;312546;312547;312548 312546 4566;4567 11 SLDIGNQMNVSEEMK Oxidation (M) 1709.76 0.76003559 2932 Q6P3W7 SCYL2 SCY1-like protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 2 1 1 1 1 1 2 57.381 56.738 2 2.5786E-16 72387 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.45 104.44 62260000 0 17882000 0 4885000 5320500 3633600 3575100 9038700 0 4656200 0 0 0 7987200 5280900 47261 2932 42385 396097;396098;396099;396100;396101;396102;396103;396104;396105;396106;396107 312549;312550;312551;312552;312553;312554;312555;312556;312557 312551 4566;4567 9 SLDIGNQMNVSEEMK Unmodified 1693.7651 0.76512097 2932 Q6P3W7 SCYL2 SCY1-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 70.861 70.202 2 4.4531E-14 80212 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.156 88.501 53847000 0 32413000 0 0 0 0 0 5242800 0 2813600 3621400 0 0 2969200 6787600 47262 2932 42385 396108;396109;396110;396111;396112;396113 312558;312559;312560;312561;312562;312563 312560 5 SLDINAFRK Unmodified 1062.5822 0.58219329 3535 Q8WU79 SMAP2 Stromal membrane-associated protein 2 yes yes 0 0 1 By MS/MS 10 0 1 1 52.951 53.115 2 0.0439 59687 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 77.923 41.221 39521000 0 0 0 0 0 0 0 0 39521000 0 0 0 0 0 0 47263 3535 42386 396114 312564 312564 1 SLDIQSLDIQCEELSDAR Acetyl (Protein N-term) 2132.9896 0.98957783 979 P13489 RNH1 Ribonuclease inhibitor yes yes 1 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 90.61 90.771 2 6.801E-05 105338 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 72.937 67.759 3692400 0 0 0 0 0 0 0 0 0 2624000 1068400 0 0 0 0 47264 979 42387 396115;396116;396117 312565;312566;312567 312565 3 SLDIQVPNFPADETK Unmodified 1672.8308 0.83081599 1528 P47897 QARS Glutamine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.12 3.72 2 1 5 3 1 1 1 1 1 84.073 82.466 2;3 1.0497E-65 101835 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 190.66 159.48 1678700000 0 1613800000 0 6514700 0 27296000 0 0 0 738740 0 0 10346000 0 20052000 47265 1528 42388 396118;396119;396120;396121;396122;396123;396124;396125 312568;312569;312570;312571;312572;312573;312574;312575 312569 6 SLDIYSFIK Unmodified 1084.5805 0.58046195 4593 Q9NR50 EIF2B3 Translation initiation factor eIF-2B subunit gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 88.759 88.235 2 0.013807 101918 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.245 35.817 71047000 0 41494000 2864500 0 926890 2351800 1422100 1587400 1472100 0 3056800 3219100 1643400 2764900 8243600 47266 4593 42389 396126;396127;396128;396129;396130;396131;396132;396133;396134;396135;396136;396137 312576;312577;312578;312579;312580;312581;312582 312579 7 SLDLDGIIAEVK Unmodified 1271.6973 0.69728262 69;88 CON__P08729;CON__Q3KNV1;P08729 KRT7 Keratin, type II cytoskeletal 7 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 89.667 89.776 2 1.4764E-06 104315 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 115.18 67.978 + 116080000 0 0 0 0 4020200 5533900 4604600 6222600 7047900 20674000 13237000 12002000 3066200 9139400 30528000 47267 69;88 42390 396138;396139;396140;396141;396142;396143;396144;396145;396146;396147;396148 312583;312584;312585;312586;312587;312588;312589;312590;312591;312592;312593;312594;312595 312586 13 SLDLDGLSK Unmodified 946.49713 0.49712625 2835 Q5W0B1 RNF219 RING finger protein 219 yes yes 0 0 0 By MS/MS 2 0 1 1 62.898 57.005 2 0.022632 73046 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.879 26.927 45194000 0 45194000 0 0 0 0 0 0 0 0 0 0 0 0 0 47268 2835 42391 396149 312596 312596 1 SLDLDSIIAEVK Unmodified 1301.7078 0.70784731 780;80;105 P04264;CON__P04264;CON__P50446;CON__Q8BGZ7 KRT1 Keratin, type II cytoskeletal 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.67 1.59 4 93 1 1 2 5 7 5 7 13 8 12 8 8 7 7 6 92.534 92.594 1;2;3 3.381E-123 107548 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 236.35 175.76 + 17459000000 6963800 3665500 5494900 1026700000 711770000 541800000 427480000 3305900000 912970000 3886100000 1859100000 1812900000 528810000 790660000 1638600000 47269 780;80;105 42392 396150;396151;396152;396153;396154;396155;396156;396157;396158;396159;396160;396161;396162;396163;396164;396165;396166;396167;396168;396169;396170;396171;396172;396173;396174;396175;396176;396177;396178;396179;396180;396181;396182;396183;396184;396185;396186;396187;396188;396189;396190;396191;396192;396193;396194;396195;396196;396197;396198;396199;396200;396201;396202;396203;396204;396205;396206;396207;396208;396209;396210;396211;396212;396213;396214;396215;396216;396217;396218;396219;396220;396221;396222;396223;396224;396225;396226;396227;396228;396229;396230;396231;396232;396233;396234;396235;396236;396237;396238;396239;396240;396241;396242;396243;396244;396245;396246 312597;312598;312599;312600;312601;312602;312603;312604;312605;312606;312607;312608;312609;312610;312611;312612;312613;312614;312615;312616;312617;312618;312619;312620;312621;312622;312623;312624;312625;312626;312627;312628;312629;312630;312631;312632;312633;312634;312635;312636;312637;312638;312639;312640;312641;312642;312643;312644;312645;312646;312647;312648;312649;312650;312651;312652;312653;312654;312655;312656;312657;312658;312659;312660;312661;312662;312663;312664;312665;312666;312667;312668;312669;312670;312671;312672;312673;312674;312675;312676;312677;312678;312679;312680;312681;312682;312683;312684;312685;312686;312687;312688;312689;312690;312691;312692;312693;312694;312695;312696;312697;312698;312699;312700;312701;312702;312703;312704;312705;312706;312707;312708;312709;312710;312711;312712;312713;312714;312715 312696 110 SLDLDSIIDAVR Unmodified 1315.6983 0.69834526 103 CON__Q7Z794;Q7Z794 KRT77 Keratin, type II cytoskeletal 1b no no 0 0 0 By MS/MS By MS/MS 6.5 3.5 1 1 1 1 85.62 83.94 2 0.0060546 109409 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 52.278 33.533 + 4519500 0 2730200 0 0 0 0 0 0 0 1789300 0 0 0 0 0 47270 103 42393 396247;396248 312716;312717;312718 312717 3 SLDLEGLR Unmodified 901.4869 0.48689592 2959 Q6PJG6 BRAT1 BRCA1-associated ATM activator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 62.634 62.684 2 0.035595 71626 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 52.403 12.74 108340000 0 0 0 9354600 6756200 12951000 10382000 0 7027600 11952000 12990000 0 11519000 10424000 14989000 47271 2959 42394 396249;396250;396251;396252;396253;396254;396255;396256;396257;396258 312719;312720;312721 312719 3 SLDLFNCEVTNLNDYRENVFK Unmodified 2589.217 0.21695201 1404 P39687 ANP32A Acidic leucine-rich nuclear phosphoprotein 32 family member A yes yes 0 0 1 By MS/MS 3 0 1 1 93.603 90.363 3 2.4394E-10 108278 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 90.968 84.993 15303000 0 15303000 0 0 0 0 0 0 0 0 0 0 0 0 0 47272 1404 42395 396259 312722;312723 312723 2 SLDLFNCEVTNLNDYRESVFK Unmodified 2562.2061 0.20605297 3651 Q92688 ANP32B Acidic leucine-rich nuclear phosphoprotein 32 family member B yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 95.829 90.431 3 7.3851E-18 109204 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 102.37 86.47 92048000 56229000 35818000 0 0 0 0 0 0 0 0 0 0 0 0 0 47273 3651 42396 396260;396261;396262 312724;312725;312726 312725 2 SLDLIESLLR Unmodified 1157.6656 0.66558856 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 0 0 By MS/MS 10 0 1 1 95.881 96.036 2 0.020509 111372 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.198 24.458 2017400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2017400 47274 19 42397 396263 312727 312727 1 SLDLLGLEK Unmodified 986.56481 0.56481189 668 O95551 TDP2 Tyrosyl-DNA phosphodiesterase 2 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 79.435 79.575 2 0.0083723 91565 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.812 32.653 28368000 0 0 0 0 0 2608500 1207300 1400900 0 3674500 3098200 3290200 2307100 2158400 8622500 47275 668 42398 396264;396265;396266;396267;396268;396269;396270;396271;396272 312728;312729;312730 312730 3 SLDLPSIGGSSVGK Unmodified 1315.6983 0.69834526 5023 Q9UMZ2 SYNRG Synergin gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 9.22 2.2 1 8 1 1 1 1 1 1 1 1 1 74.372 74.13 2 0.0043892 84624 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 45.764 16.097 35947000 0 2730200 0 0 0 3565900 3163100 0 0 4060600 4047600 3778300 3741600 3692600 7167300 47276 5023 42399 396273;396274;396275;396276;396277;396278;396279;396280;396281 312731;312732;312733;312734 312733 4 SLDLTQYCFPEK Unmodified 1499.6966 0.6966307 2278 Q13395 TARBP1 Probable methyltransferase TARBP1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 77.985 78.136 2 0.0074606 89916 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.108 38.514 19258000 0 0 0 0 0 0 0 0 0 3785200 0 4618300 1764200 3475000 5615100 47277 2278 42400 396282;396283;396284;396285;396286 312735;312736;312737 312736 1 SLDLVTMK Oxidation (M) 921.48412 0.48411873 2373;4663;3634 Q92599;Q14141;Q9NVA2 SEPT8;SEPT6;SEPT11 Septin-8;Septin-6;Septin-11 no no 0 1 0 By MS/MS 2 0 1 1 48.368 42.72 2 0.020118 55838 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.716 45.623 69057000 0 69057000 0 0 0 0 0 0 0 0 0 0 0 0 0 47278 3634;2373;4663 42401 396287 312738;312739 312739 3858 2 SLDLVTMK Unmodified 905.4892 0.4892041 2373;4663;3634 Q92599;Q14141;Q9NVA2 SEPT8;SEPT6;SEPT11 Septin-8;Septin-6;Septin-11 no no 0 0 0 By MS/MS 2 0 1 1 68.273 62.373 2 0.032367 79896 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.255 42.966 84301000 0 84301000 0 0 0 0 0 0 0 0 0 0 0 0 0 47279 3634;2373;4663 42401 396288 312740 312740 1 SLDMDSIIAEVK Oxidation (M) 1335.6592 0.65918256 67;51 CON__H-INV:HIT000292931;CON__P05787;P05787 KRT8 Keratin, type II cytoskeletal 8 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 25 3 2 2 2 2 2 2 2 2 2 2 2 71.963 72.006 2 1.0219E-97 83152 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 208.63 193.48 + 4143000000 0 0 0 237810000 318600000 357720000 352420000 353390000 273270000 408970000 373670000 517530000 347400000 247030000 355170000 47280 51;67 42402 396289;396290;396291;396292;396293;396294;396295;396296;396297;396298;396299;396300;396301;396302;396303;396304;396305;396306;396307;396308;396309;396310;396311;396312;396313 312741;312742;312743;312744;312745;312746;312747;312748;312749;312750;312751;312752;312753;312754;312755;312756;312757;312758;312759;312760;312761;312762;312763;312764;312765;312766;312767 312744 48 27 SLDMDSIIAEVK Unmodified 1319.6643 0.66426794 67;51 CON__H-INV:HIT000292931;CON__P05787;P05787 KRT8 Keratin, type II cytoskeletal 8 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.47 2 1 14 1 1 1 1 1 1 1 1 1 1 2 1 2 87.064 86.593 2 2.7967E-06 100298 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 130.94 122.41 + 1997900000 5856500 0 0 23026000 98261000 123380000 90584000 166780000 117310000 222820000 187200000 245860000 105880000 160390000 450560000 47281 51;67 42402 396314;396315;396316;396317;396318;396319;396320;396321;396322;396323;396324;396325;396326;396327;396328 312768;312769;312770;312771;312772;312773;312774;312775;312776;312777;312778;312779;312780;312781;312782;312783;312784;312785;312786;312787;312788 312774 21 SLDNFFAK Unmodified 940.46543 0.46543219 4980 Q9UKY7 CDV3 Protein CDV3 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 67.81 67.862 2 0.0082674 76773 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.794 59.832 216180000 0 0 0 4802400 5595800 12589000 6899100 10238000 6314300 11237000 37921000 0 8607200 32972000 79001000 47282 4980 42403 396329;396330;396331;396332;396333;396334;396335;396336;396337;396338;396339 312789;312790;312791 312789 3 SLDNGGYYISPR Unmodified 1340.6361 0.63607935 852 P07948 LYN Tyrosine-protein kinase Lyn yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 45.287 45.401 2 0.0085476 50878 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 48.796 24.766 18957000 0 0 0 0 0 0 3339900 15617000 0 0 0 0 0 0 0 47283 852 42404 396340;396341;396342 312792;312793 312792 2 SLDNNYSTPNER Unmodified 1408.6219 0.62188585 426 O60716 CTNND1 Catenin delta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.227 28.421 2 1.3031E-08 29707 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 137.89 99.592 103490000 0 0 0 5754000 6098500 5974500 7602100 5769800 4685400 9443800 11287000 10403000 12214000 11835000 12427000 47284 426 42405 396343;396344;396345;396346;396347;396348;396349;396350;396351;396352;396353;396354 312794;312795;312796;312797;312798;312799;312800;312801;312802;312803;312804;312805 312797 12 SLDNNYSTPNERGDHNR Unmodified 1987.8732 0.87324294 426 O60716 CTNND1 Catenin delta-1 yes yes 0 0 1 By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 18 2 1 2 1 2 2 2 2 1 1 1 1 19.306 19.484 3;4 0.00065219 20106 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 52.254 47.35 119290000 0 0 0 7639900 2140000 10511000 4958200 14342000 8561800 21613000 9696300 12427000 9686700 8223400 9489400 47285 426 42406 396355;396356;396357;396358;396359;396360;396361;396362;396363;396364;396365;396366;396367;396368;396369;396370;396371;396372 312806;312807;312808;312809;312810 312806 3 SLDPENSETELER Unmodified 1517.6845 0.68454569 6 A0MZ66 KIAA1598 Shootin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.323 46.49 2 1.8298E-09 51236 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 136.48 116.17 151380000 0 0 0 6986900 8033800 11067000 12812000 0 8377900 12004000 18949000 18072000 13154000 12600000 29324000 47286 6 42407 396373;396374;396375;396376;396377;396378;396379;396380;396381;396382;396383;396384 312811;312812;312813;312814;312815;312816;312817;312818;312819;312820;312821;312822;312823;312824 312819 14 SLDPSDAFNGVDCNSLSFLSVFTDGDLGDSGK Unmodified 3335.4776 0.47759596 465 O75153 CLUH Clustered mitochondria protein homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 100.6 95.934 3 2.8038E-13 119734 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.762 57.116 44736000 19426000 23464000 1845900 0 0 0 0 0 0 0 0 0 0 0 0 47287 465 42408 396385;396386;396387;396388 312825;312826;312827;312828;312829;312830 312829 6 SLDQAINDK Unmodified 1002.4982 0.49818889 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 27.45 26.499 2 0.0034127 29068 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 104.44 53.378 517170000 14567000 267880000 1195800 10172000 11475000 28538000 17489000 12513000 14086000 26653000 22269000 29860000 17483000 18419000 24567000 47288 5071 42409 396389;396390;396391;396392;396393;396394;396395;396396;396397;396398;396399;396400;396401;396402;396403;396404 312831;312832;312833;312834;312835;312836;312837;312838;312839;312840;312841;312842;312843;312844;312845 312831 13 SLDQAINDKK Unmodified 1130.5932 0.5931519 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 23.968 19.923 2 0.037571 26660 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.149 13.346 12365000 0 12365000 0 0 0 0 0 0 0 0 0 0 0 0 0 47289 5071 42410 396405;396406 312846 312846 0 SLDQDPVVR Unmodified 1027.5298 0.52982336 3633 Q92598 HSPH1 Heat shock protein 105 kDa yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 34.051 34.03 2 0.010514 36088 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.207 30.657 86673000 0 0 0 6021800 7692400 6394200 6723100 0 0 0 0 0 0 0 59841000 47290 3633 42411 396407;396408;396409;396410;396411 312847 312847 1 SLDQDPVVRAQEIK Unmodified 1596.8471 0.84713476 3633 Q92598 HSPH1 Heat shock protein 105 kDa yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.12 0.331 7 1 2 3 3 56.331 50.751 2;3 3.8362E-30 65969 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 164.22 129.52 2126100000 124810000 1840400000 160880000 0 0 0 0 0 0 0 0 0 0 0 0 47291 3633 42412 396412;396413;396414;396415;396416;396417;396418;396419 312848;312849;312850;312851;312852;312853 312849 5 SLDQTSPCPLVLVR Unmodified 1583.8341 0.83412723 2993 Q6XZF7 DNMBP Dynamin-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 78.835 78.876 2 3.0864E-08 90952 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 101.95 80.491 104440000 0 0 0 4988800 7089600 8968900 8375700 10246000 6301400 10788000 13280000 13850000 10125000 10431000 0 47292 2993 42413 396420;396421;396422;396423;396424;396425;396426;396427;396428;396429;396430 312854;312855;312856;312857;312858;312859 312854 5 SLDQYDFSR Unmodified 1129.504 0.50400254 4801 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 50.095 50.12 2 0.045968 56693 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 43.083 35.515 22507000 0 0 0 4309700 0 0 4608600 5324000 0 0 0 0 5448300 2816700 0 47293 4801 42414 396431;396432;396433;396434;396435 312860;312861 312861 2 SLDSELEIANDPDK Unmodified 1544.7206 0.72059684 2086 Q03001 DST Dystonin yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 64.753 64.57 2 0.0066284 74349 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 57.836 43.417 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47294 2086 42415 396436;396437 312862;312863 312863 2 SLDTSEEGGRK Unmodified 1177.5575 0.55749468 4079 Q9BPX3 NCAPG Condensin complex subunit 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 7.76 3.47 3 2 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 7.5887 6.7443 2;3 0.0011843 5110 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 63.32 51.157 146350000 10403000 73136000 5279700 3459500 2193200 7864100 3318900 4580000 4131800 5870000 6033900 3706000 3794600 4743200 7839800 47295 4079 42416 396438;396439;396440;396441;396442;396443;396444;396445;396446;396447;396448;396449;396450;396451;396452;396453;396454 312864;312865;312866;312867;312868;312869;312870;312871;312872;312873;312874 312865 10 SLDTSEEGGRKK Unmodified 1305.6525 0.6524577 4079 Q9BPX3 NCAPG Condensin complex subunit 3 yes yes 0 0 2 By MS/MS 2 0 1 1 6.3301 4.1126 3 0.011695 5817 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 73.632 58.26 129460000 0 0 129460000 0 0 0 0 0 0 0 0 0 0 0 0 47296 4079 42417 396455 312875 312875 0 SLDTVQEQK Unmodified 1046.5244 0.52440364 5317 yes yes 0 0 0 By MS/MS 10 0 1 1 25.468 25.946 2 0.031046 27191 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 47.916 1.0802 + 68148000 0 0 0 0 0 0 0 0 0 0 68148000 0 0 0 0 47297 5317 42418 396456 312876 312876 1 SLDVEHTTLYSNNSTANK Unmodified 1992.9389 0.93886289 3080 Q7Z3B3 KANSL1 KAT8 regulatory NSL complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 48.552 48.325 3 0.0021779 54899 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 38.057 33.708 25744000 0 0 0 4761700 5250200 0 9102200 6629700 0 0 0 0 0 0 0 47298 3080 42419 396457;396458;396459;396460 312877;312878;312879 312879 3 SLDVNQDSELK Unmodified 1246.6041 0.60411052 4029 Q99584 S100A13 Protein S100-A13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.79 1 3 1 10 1 3 1 1 1 1 1 1 1 1 1 1 1 45.026 43.89 2 2.1731E-06 47416 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 130.66 97.763 1737900000 86334000 1248200000 5340100 0 15349000 15676000 16143000 13914000 0 16570000 63057000 62156000 13516000 44071000 137560000 47299 4029 42420 396461;396462;396463;396464;396465;396466;396467;396468;396469;396470;396471;396472;396473;396474;396475 312880;312881;312882;312883;312884;312885;312886;312887;312888;312889;312890;312891;312892;312893;312894;312895;312896 312888 16 SLDWQIDVDLLNK Unmodified 1557.8039 0.80387296 2471 Q15008 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 96.259 88.128 2 3.5423E-13 113841 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 122.51 107.18 51141000 51141000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47300 2471 42421 396476;396477 312897;312898 312898 2 SLEAASEK Unmodified 833.41306 0.41306227 1957 P67936 TPM4 Tropomyosin alpha-4 chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By matching By matching 7.4 3.68 4 1 10 2 2 1 1 1 1 1 1 1 1 1 1 1 8.4849 7.7162 2 0.012232 6618 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 75.109 16.128 1852200000 96544000 1699100000 4792900 3606200 2724900 2103200 4004500 4178400 3375400 0 13728000 0 3659700 4050800 10301000 47301 1957 42422 396478;396479;396480;396481;396482;396483;396484;396485;396486;396487;396488;396489;396490;396491;396492 312899;312900;312901;312902;312903;312904 312904 4 SLEAHMYPEK Unmodified 1203.5594 0.55940893 2061 Q01664 TFAP4 Transcription factor AP-4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 2 1 2 1 1 33.72 33.982 2;3 0.0092405 36903 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 95.775 62.224 63825000 0 0 0 0 0 7426600 9519100 0 4672300 10849000 1321700 0 0 7917800 22118000 47302 2061 42423 396493;396494;396495;396496;396497;396498;396499;396500;396501 312905;312906;312907 312906 3 SLEAQADK Unmodified 860.42396 0.42396131 853 P07951 TPM2 Tropomyosin beta chain yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 9.2119 8.7789 2 0.016961 6668 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.429 31.229 279900000 0 227420000 0 5111000 3524900 0 7001100 3934800 2949900 2524500 9713000 6047500 0 3124500 8540300 47303 853 42424 396502;396503;396504;396505;396506;396507;396508;396509;396510;396511;396512;396513 312908;312909;312910;312911 312910 4 SLEAQVAHADQQLR Unmodified 1564.7958 0.79576789 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 51.931 51.747 3 0.0013152 58172 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 39.629 26.492 13128000 0 0 0 0 5202200 0 0 0 0 7925500 0 0 0 0 0 47304 2459 42425 396514;396515;396516 312912;312913;312914 312912 3 SLEDALAEAQR Unmodified 1201.5939 0.59388018 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.915 61.019 2 9.4161E-16 70060 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 155.84 129.46 262890000 0 0 0 14710000 13997000 23099000 17654000 19729000 10839000 25108000 26525000 23989000 21585000 20228000 45427000 47305 643 42426 396517;396518;396519;396520;396521;396522;396523;396524;396525;396526;396527;396528 312915;312916;312917;312918;312919;312920;312921;312922;312923;312924;312925;312926 312926 10 SLEDALAEAQRVNTK Unmodified 1643.8479 0.84786304 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 69.953 69.74 3 0.00043674 80026 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.727 39.704 92497000 0 2494400 0 3024600 2544100 5967200 5365900 5509500 7185200 13054000 8891200 8024300 5268100 6451600 18718000 47306 643 42427 396529;396530;396531;396532;396533;396534;396535;396536;396537;396538;396539;396540;396541 312927;312928;312929;312930;312931;312932;312933;312934;312935;312936;312937 312927 11 SLEDALSSDTSGHFRR Unmodified 1776.8391 0.83908927 857 P08133 ANXA6 Annexin A6 yes yes 0 0 1 By MS/MS 10 0 2 2 54.917 55.557 3;4 0.010709 62230 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.813 32.768 11883000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11883000 47307 857 42428 396542;396543 312938;312939 312939 1 SLEDLQDEYDFK Unmodified 1500.662 0.66201933 1448 P42224 STAT1 Signal transducer and activator of transcription 1-alpha/beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.91 3.42 2 1 8 1 2 1 1 1 1 1 1 1 1 75.346 73.863 2 5.5498E-17 88014 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 183.67 169 545940000 29784000 466570000 0 4659600 3255300 5635200 0 0 5176300 7369800 4585200 0 0 6526100 12388000 47308 1448 42429 396544;396545;396546;396547;396548;396549;396550;396551;396552;396553;396554 312940;312941;312942;312943;312944;312945;312946;312947;312948 312943 9 SLEDPYSQQIR Unmodified 1334.6466 0.64664404 4668 Q9NVH2 INTS7 Integrator complex subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 50.392 50.249 2 0.00057718 57335 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 80.688 69.095 40735000 0 0 0 7404400 5350100 0 9076200 8797700 0 0 0 0 0 10106000 0 47309 4668 42430 396555;396556;396557;396558;396559 312949;312950;312951;312952 312952 4 SLEDQVEMLR Unmodified 1218.5914 0.59143734 996 P14314 PRKCSH Glucosidase 2 subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 72.368 69.861 2 0.0012009 87911 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.36 100.62 424200000 11464000 283900000 2996000 0 0 0 0 0 0 0 25321000 29238000 0 0 71280000 47310 996 42431 396560;396561;396562;396563;396564;396565;396566;396567;396568;396569;396570 312953;312954;312955;312956;312957;312958;312959;312960;312961;312962 312956 10 SLEDQVEMLR Oxidation (M) 1234.5864 0.58635197 996 P14314 PRKCSH Glucosidase 2 subunit beta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.42 3.07 2 2 15 3 1 1 1 1 1 1 1 1 2 2 2 2 62.931 62.063 2 0.00034818 71026 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 124.23 86.144 457030000 0 102260000 2145800 10816000 14675000 0 14837000 10124000 10758000 18083000 45232000 54802000 40880000 36341000 96075000 47311 996 42431 396571;396572;396573;396574;396575;396576;396577;396578;396579;396580;396581;396582;396583;396584;396585;396586;396587;396588;396589 312963;312964;312965;312966;312967;312968;312969;312970;312971;312972;312973;312974;312975;312976;312977;312978;312979;312980;312981;312982;312983;312984;312985;312986 312983 1350 24 SLEDQVEMLRTVK Oxidation (M) 1562.7974 0.79740737 996 P14314 PRKCSH Glucosidase 2 subunit beta yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2.12 0.331 7 1 1 4 3 72.819 68 2;3 0.0017434 83826 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 92.856 76.083 516480000 79421000 301910000 135140000 0 0 0 0 0 0 0 0 0 0 0 0 47312 996 42432 396590;396591;396592;396593;396594;396595;396596;396597 312987;312988;312989;312990;312991;312992;312993 312993 1350 4 SLEDQVEMLRTVK Unmodified 1546.8025 0.80249275 996 P14314 PRKCSH Glucosidase 2 subunit beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 2 3 2 79.288 74.361 2;3 2.3009E-21 93235 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 176.32 135.33 835070000 206540000 535710000 92829000 0 0 0 0 0 0 0 0 0 0 0 0 47313 996 42432 396598;396599;396600;396601;396602;396603;396604 312994;312995;312996;312997;312998;312999 312995 3 SLEDVVR Unmodified 816.43413 0.43413207 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.575 39.754 2 0.030787 44547 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 74.415 18.974 216940000 0 0 0 12795000 10852000 14838000 13706000 13251000 9887300 20396000 22642000 24118000 20280000 24033000 30141000 47314 2378 42433 396605;396606;396607;396608;396609;396610;396611;396612;396613;396614;396615;396616 313000;313001;313002;313003 313000 4 SLEEAEAYSR Unmodified 1153.5251 0.52513192 99 Q6KB66;CON__Q6KB66-1;CON__Q0VBK2 KRT80 Keratin, type II cytoskeletal 80 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.291 33.475 2 0.0017038 36654 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 124.74 90.947 + 261290000 0 0 0 48872000 12745000 16668000 13872000 28128000 11482000 24481000 24791000 32466000 24856000 14344000 8585400 47315 99 42434 396617;396618;396619;396620;396621;396622;396623;396624;396625;396626;396627;396628 313004;313005;313006;313007;313008;313009;313010;313011;313012;313013;313014;313015 313010 12 SLEEAQEWLK Unmodified 1231.6085 0.60846762 4638 Q9NTX5 ECHDC1 Ethylmalonyl-CoA decarboxylase yes yes 0 0 0 By MS/MS 10 0 1 1 72.116 72.37 2 0.008087 82945 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 60.892 25.597 15875000 0 0 0 0 0 0 0 0 0 0 15875000 0 0 0 0 47316 4638 42435 396629 313016 313016 1 SLEEDQEPIVSHQK Unmodified 1637.7897 0.78967946 2397 Q14241 TCEB3 Transcription elongation factor B polypeptide 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 33.996 34.235 3 0.00077425 36894 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.178 48.657 308330000 0 0 0 19068000 0 24561000 21174000 16952000 21519000 29646000 40308000 40058000 29675000 24159000 41208000 47317 2397 42436 396630;396631;396632;396633;396634;396635;396636;396637;396638;396639;396640 313017;313018;313019;313020;313021;313022;313023;313024;313025;313026 313026 9 SLEEGEGPIAVIMTPTR Oxidation (M) 1814.9084 0.90841439 3041 Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.342 77.399 2 2.0331E-71 88890 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 177.42 146.55 454080000 0 0 0 20926000 28384000 31958000 38686000 32781000 27887000 52049000 45151000 56451000 36638000 40436000 42732000 47318 3041 42437 396641;396642;396643;396644;396645;396646;396647;396648;396649;396650;396651;396652 313027;313028;313029;313030;313031;313032;313033;313034;313035;313036;313037;313038;313039;313040 313030 4662 13 SLEEGEGPIAVIMTPTR Unmodified 1798.9135 0.91349976 3041 Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 2 1 2 1 1 1 1 1 1 2 85.336 85.416 2;3 5.4938E-32 98487 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 123.64 110.21 177700000 0 0 0 4055800 7595100 13252000 7803100 16673000 7485400 19747000 15844000 20038000 11304000 15684000 38214000 47319 3041 42437 396653;396654;396655;396656;396657;396658;396659;396660;396661;396662;396663;396664;396665;396666;396667 313041;313042;313043;313044;313045;313046;313047;313048;313049;313050;313051;313052;313053 313046 13 SLEEILK Unmodified 830.47493 0.47493425 5275 Q9Y6B7 AP4B1 AP-4 complex subunit beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.278 41.457 2 0.034226 47229 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 71.378 1.9457 77498000 0 0 0 1973500 3020600 2703200 4264800 3999200 2072300 8496100 10743000 7002900 6197600 6482600 20543000 47320 5275 42438 396668;396669;396670;396671;396672;396673;396674;396675;396676;396677;396678;396679 313054;313055;313056 313056 3 SLEEILNSIPPPPPPAMTNEAGAPR Oxidation (M) 2613.3109 0.31085239 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 89.893 90.04 3 5.3131E-10 104678 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 52.483 49.914 17434000 0 0 0 0 0 0 0 0 0 8245000 5568300 3620300 0 0 0 47321 4634 42439 396680;396681;396682 313057;313058 313057 6039 2 SLEEIYLFSLPIK Unmodified 1550.8596 0.85959692 1027 P15880 RPS2 40S ribosomal protein S2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 97.637 96.453 2 1.2129E-17 116133 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 127.42 106.55 69126000 8947900 10080000 3570800 2931600 1411400 1840800 890090 2775400 1631300 8063700 4513400 3297100 0 2737200 16435000 47322 1027 42440 396683;396684;396685;396686;396687;396688;396689;396690;396691;396692;396693;396694;396695;396696;396697 313059;313060;313061;313062;313063;313064;313065;313066;313067;313068;313069;313070 313068 12 SLEELPVDIILASVG Unmodified 1553.8552 0.85523983 5267 Q9Y678 COPG1 Coatomer subunit gamma-1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 103.84 99.659 2 0.0019308 123025 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.213 71.636 7586600 0 7586600 0 0 0 0 0 0 0 0 0 0 0 0 0 47323 5267 42441 396698;396699 313071 313071 0 SLEELRLEDYQANR Unmodified 1734.8537 0.8536767 1707 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.604 64.693 3 0.0084422 73784 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 38.511 27.406 57097000 0 0 0 2341800 3084100 4089800 3339800 4799600 4138100 4357500 5453100 10209000 4192800 4090500 7001300 47324 1707 42442 396700;396701;396702;396703;396704;396705;396706;396707;396708;396709;396710;396711 313072;313073;313074;313075 313073 4 SLEELRLEDYQANRK Unmodified 1862.9486 0.94863972 1707 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 3 3 1 1 2 2 2 2 56.467 56.581 3;4 8.4071E-05 65095 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 80.706 64.307 426860000 0 0 0 20494000 8436300 35857000 25428000 53514000 38989000 12596000 16675000 53277000 48340000 30051000 83199000 47325 1707 42443 396712;396713;396714;396715;396716;396717;396718;396719;396720;396721;396722;396723;396724;396725;396726;396727;396728;396729;396730;396731;396732;396733;396734;396735 313076;313077;313078;313079;313080;313081;313082;313083;313084;313085;313086;313087;313088 313088 6 SLEELSK Unmodified 804.4229 0.42289868 2027 P98194 ATP2C1 Calcium-transporting ATPase type 2C member 1 yes yes 0 0 0 By MS/MS 2 0 1 1 29.04 24.693 2 0.034151 32368 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.272 22.558 37149000 0 37149000 0 0 0 0 0 0 0 0 0 0 0 0 0 47326 2027 42444 396736 313089 313089 1 SLEEQDQETLR Unmodified 1346.6314 0.6313879 1549 P48681 NES Nestin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 31.036 31.358 2 1.9356E-05 34008 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 126.07 43.615 39299000 0 0 0 0 0 4350800 2993800 2768000 0 3004600 4708100 6876200 5348500 3571700 5677200 47327 1549 42445 396737;396738;396739;396740;396741;396742;396743;396744;396745;396746;396747 313090;313091;313092;313093;313094;313095;313096;313097;313098;313099;313100 313098 11 SLEERENAGVDPTLAIPMIQK Oxidation (M) 2326.1839 0.18386096 3686 Q92917 GPKOW G patch domain and KOW motifs-containing protein yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 78.284 77.277 3 7.7354E-06 89266 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 55.209 50.759 171790000 0 75271000 18575000 1975600 0 0 0 0 0 19055000 15560000 0 0 13444000 27911000 47328 3686 42446 396748;396749;396750;396751;396752;396753;396754 313101;313102;313103;313104;313105 313101 5243 5 SLEERENAGVDPTLAIPMIQK Unmodified 2310.1889 0.18894634 3686 Q92917 GPKOW G patch domain and KOW motifs-containing protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 4 3.46 3 1 1 1 1 1 85.399 81.604 3 6.7824E-10 102737 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.156 80.492 133790000 8041000 107600000 13028000 0 0 0 0 0 0 0 0 0 0 0 5123700 47329 3686 42446 396755;396756;396757;396758 313106;313107;313108;313109;313110 313107 4 SLEETIIQK Unmodified 1059.5812 0.58119023 3615 Q92538 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.57 3.85 3 1 3 1 2 1 1 1 1 55.008 50.144 2 0.0096112 64782 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.833 45.404 488330000 0 485340000 2990300 0 0 0 0 0 0 0 0 0 0 0 0 47330 3615 42447 396759;396760;396761;396762;396763;396764;396765 313111;313112;313113;313114;313115;313116 313112 6 SLEGADLPNLLFYGPPGTGK Unmodified 2045.047 0.046956778 1347 P35249 RFC4 Replication factor C subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 3 1 1 1 1 1 1 1 1 1 1 1 1 94.572 93.777 2;3 8.5193E-99 115283 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 169.4 154.01 360090000 0 258930000 0 866310 3485500 3944400 2328500 6249200 4349600 22910000 12747000 7311300 2090200 5523000 29356000 47331 1347 42448 396766;396767;396768;396769;396770;396771;396772;396773;396774;396775;396776;396777;396778;396779;396780 313117;313118;313119;313120;313121;313122;313123;313124;313125;313126;313127;313128;313129;313130;313131;313132;313133;313134 313123 18 SLEGDLEDLK Unmodified 1117.5503 0.55028404 1111 P20700 LMNB1 Lamin-B1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 69.979 69.411 2 0.0029636 78618 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 78.334 46.4 382980000 0 321750000 0 2721800 2057600 6161900 2790800 4028800 2681000 4146500 7364200 7312500 5019800 5805300 11140000 47332 1111 42449 396781;396782;396783;396784;396785;396786;396787;396788;396789;396790;396791;396792;396793;396794;396795 313135;313136;313137;313138;313139;313140;313141;313142;313143;313144;313145;313146;313147;313148;313149;313150 313146 16 SLEGGGCPAR Unmodified 1002.4553 0.45527821 5260 Q9Y613 FHOD1 FH1/FH2 domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.274 13.429 2 0.0037884 12075 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.213 64.385 33039000 0 0 0 1479100 1978000 3247900 2573800 1561900 1903000 2315700 3645100 3264400 3559300 3279500 4231200 47333 5260 42450 396796;396797;396798;396799;396800;396801;396802;396803;396804;396805;396806;396807 313151;313152;313153;313154;313155;313156;313157;313158;313159;313160;313161;313162 313154 12 SLEGTEAQVFK Unmodified 1207.6085 0.60846762 2228 Q13045 FLII Protein flightless-1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 53.987 53.945 2 0.00071371 61929 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 84.615 55.453 68079000 0 0 0 7762500 9419600 0 8357600 10601000 0 0 18281000 0 13658000 0 0 47334 2228 42451 396808;396809;396810;396811;396812;396813 313163;313164;313165;313166;313167;313168;313169 313169 5 SLEHSGSLDDPNR Unmodified 1425.6484 0.64843495 4997 Q9ULJ3 ZBTB21 Zinc finger and BTB domain-containing protein 21 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.485 21.693 3 0.0017486 22456 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 40.88 26.623 99845000 0 0 0 7269700 5132700 10275000 6843600 0 3998400 13370000 9274600 11572000 10752000 11529000 9828100 47335 4997 42452 396814;396815;396816;396817;396818;396819;396820;396821;396822;396823;396824;396825 313170;313171;313172;313173;313174;313175;313176;313177 313170 8 SLEHSGSLDDPNRISLVK Unmodified 1966.012 0.011968255 4997 Q9ULJ3 ZBTB21 Zinc finger and BTB domain-containing protein 21 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 2 2 2 1 2 1 1 1 2 56.05 56.304 3;4 0.0013258 63133 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.998 22.784 113170000 0 0 0 0 0 12776000 9073500 8771700 9315900 15438000 8360100 11639000 0 9031500 28762000 47336 4997 42453 396826;396827;396828;396829;396830;396831;396832;396833;396834;396835;396836;396837;396838;396839 313178;313179 313179 2 SLEIEEK Unmodified 846.43346 0.43346336 1941;2847 P63151;Q9Y2T4;Q00005;Q66LE6 PPP2R2A;PPP2R2C;PPP2R2B;PPP2R2D Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B gamma isoform;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform no no 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 27.203 27.432 2 0.023353 30019 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 91.626 4.7602 225440000 0 0 0 11603000 12009000 27306000 0 14257000 0 0 36294000 33195000 22488000 25271000 43022000 47337 1941;2847 42454 396840;396841;396842;396843;396844;396845;396846;396847;396848 313180;313181 313181 2 SLEKPEGSEK Unmodified 1102.5506 0.55061839 3631 Q92576 PHF3 PHD finger protein 3 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 9.7063 6.3977 2 6.876E-05 9228 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 135.43 81.654 14809000 0 14809000 0 0 0 0 0 0 0 0 0 0 0 0 0 47338 3631 42455 396849;396850 313182 313182 1 SLELEEEEIQMNDSSNLSCEQEK Unmodified 2740.1691 0.1691347 3712 Q969F1 GTF3C6 General transcription factor 3C polypeptide 6 yes yes 0 0 0 By MS/MS 3 0 1 1 77.264 73.785 3 0.032996 88759 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 19.975 17.197 5183200 0 5183200 0 0 0 0 0 0 0 0 0 0 0 0 0 47339 3712 42456 396851 313183 313183 1 SLELHEEFGYNADTQK Unmodified 1879.8588 0.85882166 1712 P53367 ARFIP1 Arfaptin-1 yes yes 0 0 0 By MS/MS 2 0 1 1 68.426 62.526 3 1.7438E-23 79730 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.66 118.36 28327000 0 28327000 0 0 0 0 0 0 0 0 0 0 0 0 0 47340 1712 42457 396852 313184;313185 313184 2 SLELIQGEPLNK Unmodified 1339.7347 0.73473076 3250 Q8IWZ3 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 71.413 71.199 2 3.1296E-08 82223 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 129.38 115.26 127920000 0 2107600 0 6483700 8254000 8201800 7267300 8829000 7252800 12170000 12455000 15230000 12668000 10917000 16088000 47341 3250 42458 396853;396854;396855;396856;396857;396858;396859;396860;396861;396862;396863;396864;396865 313186;313187;313188;313189;313190;313191;313192;313193;313194;313195;313196;313197;313198;313199;313200 313200 15 SLELLEK Unmodified 830.47493 0.47493425 4947 Q9UJX6 ANAPC2 Anaphase-promoting complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching 10 0 5 1 1 1 1 1 53.522 53.394 2 0.026078 61015 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 79.469 14.665 35272000 0 0 0 6827100 5174600 0 6539600 0 0 0 0 0 4393100 12337000 0 47342 4947 42459 396866;396867;396868;396869;396870 313201 313201 1 SLELNGAVEPSEGAPR Unmodified 1624.8057 0.80566387 4606 Q9NRL3 STRN4 Striatin-4 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 59.22 59.15 2 0.00065158 66835 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.182 76.942 7857800 0 0 0 0 1679500 0 3121700 0 0 0 0 0 0 3056600 0 47343 4606 42460 396871;396872;396873;396874 313202;313203 313202 2 SLELNPNNSTAMLR Oxidation (M) 1574.7723 0.77225526 5131 Q9Y2Z0 SUGT1 Suppressor of G2 allele of SKP1 homolog yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 58.889 58.995 2 2.9001E-05 67041 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 84.658 42.263 73674000 0 0 0 4903500 4668300 5973500 6901600 0 3880000 7179200 9467800 7395600 8879900 5971500 8452800 47344 5131 42461 396875;396876;396877;396878;396879;396880;396881;396882;396883;396884;396885 313204;313205;313206;313207;313208;313209;313210;313211;313212;313213;313214 313209 6518 11 SLELNPNNSTAMLR Unmodified 1558.7773 0.77734063 5131 Q9Y2Z0 SUGT1 Suppressor of G2 allele of SKP1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.237 71.311 2 0.00012181 81277 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.03 52.418 53521000 0 0 0 2470000 2409300 4640300 2217900 3548300 1792500 5913000 5528100 6781500 3416200 3812600 10991000 47345 5131 42461 396886;396887;396888;396889;396890;396891;396892;396893;396894;396895;396896;396897 313215;313216;313217;313218;313219;313220;313221;313222;313223;313224;313225 313218 11 SLELNPNNSTAMLRK Oxidation (M) 1702.8672 0.86721827 5131 Q9Y2Z0 SUGT1 Suppressor of G2 allele of SKP1 homolog yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 49.895 48.827 3 3.5603E-08 55203 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 90.367 72.622 559050000 188520000 0 17548000 0 25099000 35086000 41226000 29962000 0 54190000 57616000 62658000 47145000 0 0 47346 5131 42462 396898;396899;396900;396901;396902;396903;396904;396905;396906;396907 313226;313227;313228;313229;313230;313231;313232;313233;313234;313235;313236;313237 313229 6518 11 SLELNPNNSTAMLRK Unmodified 1686.8723 0.87230365 5131 Q9Y2Z0 SUGT1 Suppressor of G2 allele of SKP1 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 3 18 1 1 1 1 1 2 1 1 1 1 2 2 2 2 2 61.663 60.957 2;3 5.4984E-28 69289 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 117.08 105.39 603040000 177110000 20625000 10235000 13094000 12135000 30338000 23902000 23218000 15066000 34817000 45570000 39763000 28162000 42847000 86162000 47347 5131 42462 396908;396909;396910;396911;396912;396913;396914;396915;396916;396917;396918;396919;396920;396921;396922;396923;396924;396925;396926;396927;396928 313238;313239;313240;313241;313242;313243;313244;313245;313246;313247;313248;313249;313250;313251;313252 313248 15 SLELVMDMFK 2 Oxidation (M) 1243.5828 0.58284649 2671 Q3LIE5 ADPRM Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 27.779 27.974 2 0.0019158 28967 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.032 15.245 13273000 0 0 0 6472000 0 0 0 0 0 4060300 0 0 0 0 2740900 47348 2671 42463 396929;396930;396931;396932 313253;313254;313255;313256 313254 4335;4336 3 SLENAIEWSVK Unmodified 1274.6507 0.65066678 5221 Q9Y570 PPME1 Protein phosphatase methylesterase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 78.262 77.092 2 4.7077E-07 95953 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.48 83.371 553810000 18017000 431000000 23853000 0 2286100 5911500 3700600 5100600 3419600 9848500 6721800 11921000 3733800 7679300 20617000 47349 5221 42464 396933;396934;396935;396936;396937;396938;396939;396940;396941;396942;396943;396944;396945;396946;396947 313257;313258;313259;313260;313261;313262;313263;313264;313265;313266;313267;313268;313269;313270 313260 14 SLENETLNK Unmodified 1046.5244 0.52440364 1166 P23588 EIF4B Eukaryotic translation initiation factor 4B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.56 3.92 1 4 2 9 2 4 1 1 1 1 1 1 1 1 1 1 32.202 31.011 2 0.0016728 31404 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 133.12 67.864 1918900000 77115000 1358900000 10660000 20120000 16920000 25775000 0 0 22082000 30483000 68148000 92802000 0 75550000 120390000 47350 1166 42465 396948;396949;396950;396951;396952;396953;396954;396955;396956;396957;396958;396959;396960;396961;396962;396963 313271;313272;313273;313274;313275;313276;313277;313278;313279;313280;313281;313282;313283;313284;313285;313286 313282 15 SLENIFAESK Unmodified 1136.5714 0.57135383 2492 Q15058 KIF14 Kinesin-like protein KIF14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 70.148 70.263 2 0.019804 80787 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 47.603 14.34 8123600 0 0 0 0 0 0 0 0 0 3328800 0 0 4794900 0 0 47351 2492 42466 396964;396965;396966 313287;313288 313287 2 SLENLNSGTVEPTHSK Unmodified 1711.8377 0.83769228 2388 Q14191 WRN Werner syndrome ATP-dependent helicase yes yes 0 0 0 By MS/MS 3 0 1 1 43.564 38.791 3 0.0032153 48286 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 48.216 43.415 4400000 0 4400000 0 0 0 0 0 0 0 0 0 0 0 0 0 47352 2388 42467 396967 313289 313289 1 SLENQTYFK Unmodified 1128.5451 0.54513908 4077 Q99996 AKAP9 A-kinase anchor protein 9 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching 8.4 3.2 1 4 1 1 1 1 1 46.754 45.903 2 0.027921 59166 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.383 51.419 55773000 0 42061000 0 0 0 0 0 0 0 2655300 0 0 3031100 3081700 4943600 47353 4077 42468 396968;396969;396970;396971;396972 313290;313291 313290 2 SLENYHFVDEHGK Unmodified 1573.7161 0.71612058 2428 Q14677 CLINT1 Clathrin interactor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 42.125 42.187 3 0.00058725 47152 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 68.034 58.501 221730000 0 0 0 11625000 9344800 23676000 21648000 24397000 14606000 24518000 28447000 0 36870000 26600000 0 47354 2428 42469 396973;396974;396975;396976;396977;396978;396979;396980;396981;396982 313292;313293;313294;313295;313296;313297;313298;313299;313300;313301 313297 9 SLEPDTFQGLER Unmodified 1390.6729 0.67285879 3150 Q86UN3 RTN4RL2 Reticulon-4 receptor-like 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 68.179 68.319 2 0.00010418 77684 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.692 76.02 81120000 0 0 0 0 4838400 5336600 5727000 0 4883700 7928300 11035000 13209000 9040900 7151700 11970000 47355 3150 42470 396983;396984;396985;396986;396987;396988;396989;396990;396991;396992 313302;313303;313304;313305;313306;313307;313308;313309;313310 313304 8 SLEPEESPGK Unmodified 1071.5084 0.50841922 4187 Q9BVI0 PHF20 PHD finger protein 20 yes yes 0 0 0 By matching By matching By MS/MS By matching 10 0 4 1 1 1 1 20.86 21.226 2 0.0081131 20869 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 60.828 26.004 13175000 0 0 0 0 0 0 0 0 0 2367600 0 0 4321200 2827800 3657900 47356 4187 42471 396993;396994;396995;396996 313311 313311 1 SLEPMAGQLSNSVATK Unmodified 1631.8189 0.8188711 2927 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 63.879 63.923 2 1.2627E-07 73056 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 88.021 75.065 72850000 0 0 0 3962900 5105700 6608900 5186300 7399500 7768400 9239200 8129800 0 6907100 0 12543000 47357 2927 42472 396997;396998;396999;397000;397001;397002;397003;397004;397005;397006 313312;313313;313314;313315;313316;313317;313318;313319;313320;313321;313322 313313 11 SLEQDALR Unmodified 930.47706 0.47705951 2381 Q14160 SCRIB Protein scribble homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 33.543 33.517 2 0.012884 37153 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 73.616 6.6231 142400000 0 0 0 38351000 0 37040000 0 0 0 0 0 0 67012000 0 0 47358 2381 42473 397007;397008;397009 313323;313324;313325 313323 3 SLEQETSQLEK Unmodified 1290.6303 0.63032527 2676 Q3V6T2 CCDC88A Girdin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 41.232 40.795 2 0.00025931 45820 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 91.584 46.502 63066000 0 25274000 0 0 3570400 4708600 4876000 0 2319700 6204700 4774100 0 0 4432400 6905300 47359 2676 42474 397010;397011;397012;397013;397014;397015;397016;397017;397018;397019 313326;313327;313328;313329;313330;313331;313332 313326 7 SLEQLQK Unmodified 844.46543 0.46543219 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.891 23.097 2 0.023354 23662 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 89.673 22.639 112720000 0 0 0 6212300 7925500 6776400 7873900 5252400 5751400 11912000 9308800 12153000 14192000 12141000 13225000 47360 2459 42475 397020;397021;397022;397023;397024;397025;397026;397027;397028;397029;397030;397031 313333;313334;313335;313336;313337;313338;313339;313340 313340 8 SLEQNIQLPAALLSR Unmodified 1651.9257 0.92571943 1334 P33993 MCM7 DNA replication licensing factor MCM7 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 1 1 2 1 2 2 88.809 88.92 2;3 1.0149E-26 102866 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 127.17 115.59 64582000 0 0 0 0 1658700 3352800 1686100 2561100 2159300 6898200 5551900 6148900 1746600 6185400 26633000 47361 1334 42476 397032;397033;397034;397035;397036;397037;397038;397039;397040;397041;397042;397043;397044;397045 313341;313342;313343;313344;313345;313346;313347;313348;313349;313350;313351;313352;313353 313345 13 SLERVSLSAESLLK Unmodified 1530.8617 0.86172219 2567 Q15723 ELF2 ETS-related transcription factor Elf-2 yes yes 0 0 1 By MS/MS 2 0 1 1 84.185 76.054 3 0.00019049 99389 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.358 62.13 7459100 7459100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47362 2567 42477 397046 313354 313354 1 SLESCPGETVVAEDPAGLK Unmodified 1957.9303 0.93027204 5045 Q9UNY4 TTF2 Transcription termination factor 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 68.799 68.98 2 0.000494 79571 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 53.967 45.012 12889000 0 0 0 0 0 0 0 2029400 0 4010900 3705500 0 3143600 0 0 47363 5045 42478 397047;397048;397049;397050;397051 313355;313356;313357;313358 313358 4 SLESFVELMK Unmodified 1181.6002 0.60021112 99 Q6KB66;CON__Q6KB66-1 KRT80 Keratin, type II cytoskeletal 80 yes no 0 0 0 By MS/MS 2 0 1 1 94.858 89.993 2 0.021422 111615 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 63.816 47.359 + 10805000 0 10805000 0 0 0 0 0 0 0 0 0 0 0 0 0 47364 99 42479 397052 313359 313359 1 SLESFVELMK Oxidation (M) 1197.5951 0.59512574 99 Q6KB66;CON__Q6KB66-1 KRT80 Keratin, type II cytoskeletal 80 yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 76.522 76.098 2 0.0043515 87640 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 64.485 47.708 + 53571000 0 0 2393500 14532000 0 0 0 12835000 0 9155800 6911900 0 7742800 0 0 47365 99 42479 397053;397054;397055;397056;397057;397058 313360;313361;313362 313360 132 3 SLESINSR Unmodified 904.46141 0.46140945 1924 P62888 RPL30 60S ribosomal protein L30 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.976 22.182 2 0.0068825 22947 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 92.47 33.866 655860000 0 0 0 27923000 29531000 39279000 35067000 39978000 30840000 66145000 69154000 78210000 77195000 73704000 88838000 47366 1924 42480 397059;397060;397061;397062;397063;397064;397065;397066;397067;397068;397069;397070 313363;313364;313365;313366;313367;313368;313369;313370;313371;313372;313373 313369 9 SLESIVK Unmodified 774.44872 0.4487195 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 48.203 42.403 2 0.029674 55703 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.407 19.097 116860000 5507300 106350000 4996200 0 0 0 0 0 0 0 0 0 0 0 0 47367 2804 42481 397071;397072;397073 313374 313374 1 SLESLADGGSASPIK Unmodified 1430.7253 0.72528829 4499 Q9HB96 FANCE Fanconi anemia group E protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 64.638 63.414 2 1.2033E-22 80554 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.7 83.677 43318000 0 16103000 0 0 0 0 0 0 0 0 6862800 9584200 0 10768000 0 47368 4499 42482 397074;397075;397076;397077 313375;313376;313377;313378 313375 4 SLESLDTSLFAK Unmodified 1309.6765 0.67654718 2202 Q12874 SF3A3 Splicing factor 3A subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 82.328 80.994 2 1.9795E-26 93384 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 167.12 133.86 2530100000 37272000 1468300000 30036000 32132000 42044000 82020000 67122000 75360000 67514000 101440000 104070000 107570000 67204000 80193000 167740000 47369 2202 42483 397078;397079;397080;397081;397082;397083;397084;397085;397086;397087;397088;397089;397090;397091;397092;397093;397094 313379;313380;313381;313382;313383;313384;313385;313386;313387;313388;313389;313390;313391;313392;313393;313394;313395;313396;313397;313398;313399;313400;313401;313402;313403 313386 25 SLESQVENLQK Unmodified 1273.6514 0.65139506 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.8 3.12 3 1 1 1 2 1 1 58.797 55.274 2 8.9763E-36 70944 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 202.97 150.49 1328500000 0 1180700000 5486200 0 0 0 0 0 0 0 142300000 0 0 0 0 47370 965 42484 397095;397096;397097;397098;397099 313404;313405;313406;313407;313408;313409 313404 5 SLESSQTDLK Unmodified 1106.5455 0.54553301 712 O96006 ZBED1 Zinc finger BED domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24.603 24.077 2 0.00065942 30881 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.71 82.452 433510000 11952000 166080000 0 14759000 13427000 19283000 19261000 18275000 12649000 22199000 18746000 32117000 23626000 20538000 40596000 47371 712 42485 397100;397101;397102;397103;397104;397105;397106;397107;397108;397109;397110;397111;397112;397113 313410;313411;313412;313413;313414;313415;313416;313417;313418;313419;313420;313421;313422;313423 313415 13 SLESTTLTEK Unmodified 1107.5659 0.5659341 2607 Q16527 CSRP2 Cysteine and glycine-rich protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.83 2.61 1 5 1 1 1 1 1 1 34.17 33.76 2 0.0023993 36923 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 83.998 43.73 63664000 0 7936500 0 0 0 0 4365100 4586700 0 0 14096000 16439000 0 0 16241000 47372 2607 42486 397114;397115;397116;397117;397118;397119 313424;313425;313426;313427 313426 3 SLESVGISRK Unmodified 1074.6033 0.60332266 178 O00750 PIK3C2B Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit beta yes yes 0 0 1 By MS/MS 2 0 1 1 36.724 30.295 2 0.0032183 42336 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 113.71 72.054 18393000 18393000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47373 178 42487 397120 313428 313428 1 SLETCMYDHK Unmodified 1282.5322 0.5322079 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching 8 3.46 2 6 1 1 1 2 1 1 1 33.797 32.933 2;3 0.010295 36051 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 56.258 47.395 80569000 0 13965000 2399700 0 0 6472000 0 33848000 0 0 9472200 0 8654100 5757800 0 47374 2392 42488 397121;397122;397123;397124;397125;397126;397127;397128 313429;313430;313431 313430 2 SLETEILESLK Unmodified 1260.6813 0.68129821 1549 P48681 NES Nestin yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 95.533 91.876 2 3.6987E-18 113989 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 179.81 146.01 33296000 0 32560000 735720 0 0 0 0 0 0 0 0 0 0 0 0 47375 1549 42489 397129;397130 313432 313432 1 SLETENAGLR Unmodified 1088.5462 0.54620171 757 P02545 LMNA Prelamin-A/C;Lamin-A/C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 1 1 1 2 2 2 1 1 1 1 30.723 30.925 2 1.3136E-05 32647 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 145.63 111.84 1155700000 0 0 0 94061000 44048000 72119000 72057000 63007000 58118000 97668000 121090000 176900000 68745000 110840000 177020000 47376 757 42490 397131;397132;397133;397134;397135;397136;397137;397138;397139;397140;397141;397142;397143;397144;397145 313433;313434;313435;313436;313437;313438;313439;313440;313441;313442;313443;313444;313445;313446 313436 11 SLETENR Unmodified 847.40356 0.40356022 814 P05783 KRT18 Keratin, type I cytoskeletal 18 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 7.109 7.2138 2 0.023725 5005 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 84.244 49.138 480010000 0 0 0 28765000 51218000 73849000 68709000 71385000 60332000 29552000 40883000 24242000 0 0 31075000 47377 814 42491 397146;397147;397148;397149;397150;397151;397152;397153;397154;397155 313447;313448;313449;313450;313451;313452;313453;313454;313455 313450 9 SLETSAFVK Unmodified 980.51786 0.51786169 4496 Q9HB40 SCPEP1 Retinoid-inducible serine carboxypeptidase yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 50.393 49.774 2 0.0079891 56902 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 70.919 32.681 19062000 0 0 0 19062000 0 0 0 0 0 0 0 0 0 0 0 47378 4496 42492 397156;397157 313456;313457 313457 2 SLETSLVPLSDPK Unmodified 1384.745 0.7449611 1658 P51570 GALK1 Galactokinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 76.76 76.8 2 0.0025616 88093 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.488 53.258 54152000 0 0 0 2799500 2106000 2802200 3708600 3888200 0 0 8577400 7153600 0 5978600 17138000 47379 1658 42493 397158;397159;397160;397161;397162;397163;397164;397165;397166;397167 313458;313459;313460;313461 313459 3 SLETSSALSPSLK Unmodified 1318.698 0.6980109 3078 Q7Z333 SETX Probable helicase senataxin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 58.448 56.373 2 0.0011909 64818 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 64.439 38.88 50542000 0 38529000 0 0 6023700 0 0 5988600 0 0 0 0 0 0 0 47380 3078 42494 397168;397169;397170 313462;313463;313464 313464 3 SLETYERLEADK Unmodified 1452.7096 0.70963822 2592 Q15906 VPS72 Vacuolar protein sorting-associated protein 72 homolog yes yes 0 0 1 By MS/MS 10 0 1 1 48.087 48.145 3 0.0031103 54246 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 56.951 35.32 10656000 0 0 0 0 0 0 10656000 0 0 0 0 0 0 0 0 47381 2592 42495 397171 313465 313465 1 SLEVILR Unmodified 828.5069 0.50690308 2415 Q14566 MCM6 DNA replication licensing factor MCM6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 62.722 63.019 2 0.043924 71184 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 67.035 7.394 34651000 0 0 0 0 0 0 0 0 0 0 11053000 11343000 5604400 6649900 0 47382 2415 42496 397172;397173;397174;397175 313466;313467 313466 2 SLEVLVADLVNAQK Unmodified 1497.8403 0.84025847 2022 P98170 XIAP E3 ubiquitin-protein ligase XIAP yes yes 0 0 0 By MS/MS 2 0 1 1 99.336 94.623 2 0.028334 117028 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.355 55.74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47383 2022 42497 397176 313468 313468 1 SLEVSER Unmodified 818.4134 0.41339662 990 P13861 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 18.981 19.094 2 0.023356 19514 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 89.55 35.025 617080000 0 0 0 0 0 123430000 123350000 0 77775000 173810000 0 0 118720000 0 0 47384 990 42498 397177;397178;397179;397180;397181 313469;313470;313471;313472;313473 313469 5 SLEYCSTASIDSENPPDLNK Unmodified 2238.9951 0.99505714 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.19 3.36 2 3 2 24 4 3 2 2 2 2 2 2 2 2 2 2 2 2 69.084 68.311 2;3 3.5149E-165 80824 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 274.24 266.69 924580000 108810000 357010000 0 11413000 21500000 27481000 24396000 29608000 21906000 36973000 53610000 60503000 32337000 58683000 80355000 47385 1986 42499 397182;397183;397184;397185;397186;397187;397188;397189;397190;397191;397192;397193;397194;397195;397196;397197;397198;397199;397200;397201;397202;397203;397204;397205;397206;397207;397208;397209;397210;397211;397212 313474;313475;313476;313477;313478;313479;313480;313481;313482;313483;313484;313485;313486;313487;313488;313489;313490;313491;313492;313493;313494;313495;313496;313497;313498 313480 24 SLFDQGVK Unmodified 892.46543 0.46543219 2128 Q06546 GABPA GA-binding protein alpha chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.105 46.272 2 0.02755 52053 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 57.281 27.096 136900000 0 0 0 7860000 5206400 14804000 9242600 8598300 6370400 12241000 16004000 13571000 12786000 11051000 19164000 47386 2128 42500 397213;397214;397215;397216;397217;397218;397219;397220;397221;397222;397223;397224 313499;313500;313501;313502;313503 313500 5 SLFEASQQLLNEMK Unmodified 1636.8131 0.81305744 28 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 96.654 90.202 2 8.0681E-48 113749 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 183.33 161 40455000 19202000 21254000 0 0 0 0 0 0 0 0 0 0 0 0 0 47387 28 42501 397225;397226 313504;313505 313505 2 SLFEASQQLLNEMK Oxidation (M) 1652.808 0.80797206 28 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 0 1 0 By MS/MS 2 0 1 1 82.594 80.132 2 1.2623E-23 97237 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 129.82 110.06 7640100 0 0 7640100 0 0 0 0 0 0 0 0 0 0 0 0 47388 28 42501 397227 313506 313506 27 1 SLFEQYGK Unmodified 970.476 0.47599688 4209 Q9BWF3;Q9BQ04 RBM4;RBM4B RNA-binding protein 4;RNA-binding protein 4B yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.572 49.728 2 0.032024 55111 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.39 74.94 267950000 0 0 0 12650000 15196000 18957000 22182000 18498000 15946000 23975000 28468000 28843000 21040000 20723000 41467000 47389 4209 42502 397228;397229;397230;397231;397232;397233;397234;397235;397236;397237;397238;397239 313507 313507 0 SLFFPDEAINK Unmodified 1279.6449 0.64485312 1540 P48506 GCLC Glutamate--cysteine ligase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 5.56 4 1 3 1 4 2 2 1 1 1 1 1 80.037 79.779 2 3.7257E-09 99765 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.26 119.4 219800000 17189000 157780000 24234000 0 0 1297400 0 0 0 0 0 0 0 3370800 15926000 47390 1540 42503 397240;397241;397242;397243;397244;397245;397246;397247;397248 313508;313509;313510;313511;313512;313513;313514 313508 6 SLFGDDEK Unmodified 909.40798 0.40797689 4818 Q9P2I0 CPSF2 Cleavage and polyadenylation specificity factor subunit 2 yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.245 35.427 2 0.020846 39001 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 62.464 31.161 105690000 0 0 0 4798200 4789400 8112300 6384800 5426000 8726400 12678000 9909100 11367000 8829800 8300800 16366000 47391 4818 42504 397249;397250;397251;397252;397253;397254;397255;397256;397257;397258;397259;397260 313515;313516;313517;313518;313519;313520;313521;313522 313515 8 SLFGHTVGGAAGVVSR Unmodified 1513.8001 0.80012499 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.559 61.659 3 1.4488E-08 70236 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 67.902 59.989 141770000 0 0 0 2945800 4093000 9510600 6745600 14849000 7030500 13934000 11482000 21183000 12206000 13401000 24391000 47392 3023 42505 397261;397262;397263;397264;397265;397266;397267;397268;397269;397270;397271;397272 313523;313524;313525;313526;313527;313528;313529;313530;313531 313530 9 SLFGTTSGFGTSGTSMFGSATTDNHNPMK Acetyl (Protein N-term);Oxidation (M) 2995.2964 0.29640089 1981 P78406 RAE1 mRNA export factor yes yes 1 1 0 By MS/MS By MS/MS 10 0 3 1 2 87.657 87.826 3 2.707E-32 98828 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.888 75.793 14813000 0 0 0 0 0 0 0 1690500 0 0 0 0 0 0 13123000 47393 1981 42506 397273;397274;397275 313532;313533 313532 3201;3202 2 SLFLNCSESKK Unmodified 1311.6493 0.64928657 5389 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 2 2 2 2 2 2 41.257 41.367 3 0.0026634 46131 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 51.927 36.387 + 129280000 0 0 0 0 14296000 23795000 16429000 0 13442000 25722000 0 35593000 0 0 0 47394 5389 42507 397276;397277;397278;397279;397280;397281;397282;397283;397284;397285;397286;397287 313534;313535;313536;313537;313538;313539;313540;313541;313542;313543;313544 313536 8 SLFPEGNPAK Unmodified 1058.5397 0.53965977 367 O43795 MYO1B Unconventional myosin-Ib yes yes 0 0 0 By MS/MS 2 0 1 1 56.643 50.821 2 0.0039295 65790 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.051 61.49 22792000 0 22792000 0 0 0 0 0 0 0 0 0 0 0 0 0 47395 367 42508 397288 313545;313546 313545 2 SLFPENLQADK Unmodified 1260.635 0.63501672 2215 Q12965 MYO1E Unconventional myosin-Ie yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 69.575 68.856 2 7.4391E-07 83764 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 134.25 116.78 653820000 0 503500000 0 9412400 8646200 17123000 10260000 9497400 14328000 20596000 0 0 13910000 16020000 30529000 47396 2215 42509 397289;397290;397291;397292;397293;397294;397295;397296;397297;397298;397299;397300;397301;397302 313547;313548;313549;313550;313551;313552;313553;313554;313555;313556;313557;313558;313559;313560;313561;313562 313554 14 SLFPENLQADKK Unmodified 1388.73 0.72997974 2215 Q12965 MYO1E Unconventional myosin-Ie yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 57.291 57.152 3 0.0010217 64927 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 61.11 49.191 61167000 0 0 0 9485000 10488000 0 14347000 14586000 0 0 0 0 12261000 0 0 47397 2215 42510 397303;397304;397305;397306;397307 313563;313564;313565 313563 2 SLFPGLETK Unmodified 990.5386 0.53859714 3950 Q96PZ0 PUS7 Pseudouridylate synthase 7 homolog yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 6.17 3.85 2 1 3 2 1 1 1 1 75.043 73.348 2 0.010372 83111 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.42 36.246 316100000 0 221480000 48183000 0 0 0 8189200 0 0 0 0 14175000 0 0 24071000 47398 3950 42511 397308;397309;397310;397311;397312;397313 313566;313567;313568 313566 3 SLFSNVVTK Unmodified 993.5495 0.54949617 1307 P31939 ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 6.55 3.8 3 2 6 2 2 1 1 1 1 1 1 1 65.887 63.563 2 0.0097659 82797 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.67 58.836 1445400000 846630000 347260000 107300000 0 0 0 3303100 2963700 0 0 31137000 19418000 0 19062000 68273000 47399 1307 42512 397314;397315;397316;397317;397318;397319;397320;397321;397322;397323;397324 313569;313570;313571;313572;313573;313574;313575;313576 313569 6 SLFSPQNTLAAPTGHPPTSGVEK Unmodified 2335.1808 0.1808245 2810 Q5VT52 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 2 1 1 1 1 1 72.36 72.429 2;3 5.0437E-76 83781 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 99.93 82.561 958710000 0 0 0 54766000 58591000 57643000 75595000 86334000 63021000 99205000 95455000 100070000 78313000 78825000 110890000 47400 2810 42513 397325;397326;397327;397328;397329;397330;397331;397332;397333;397334;397335;397336;397337 313577;313578;313579;313580;313581;313582;313583;313584;313585;313586;313587;313588;313589;313590;313591;313592;313593 313593 17 SLFSSIGEVESAK Unmodified 1352.6824 0.68236084 2566 Q15717 ELAVL1 ELAV-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 77.863 77.969 2 2.0107E-09 89256 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 115.57 87.365 365040000 0 0 0 0 15633000 27032000 18467000 30628000 23572000 46977000 37413000 39706000 27905000 36455000 61257000 47401 2566 42514 397338;397339;397340;397341;397342;397343;397344;397345;397346;397347;397348 313594;313595;313596;313597;313598;313599;313600;313601;313602;313603 313601 10 SLFTTHSSAK Unmodified 1077.5455 0.54547343 4240 Q9BY42 RTFDC1 Protein RTF2 homolog yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 22.413 22.746 2 0.016128 23279 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 49.715 10.069 21707000 0 0 0 0 0 2085000 0 0 0 3417300 5767600 3964900 3167600 3305000 0 47402 4240 42515 397349;397350;397351;397352;397353;397354 313604;313605 313605 2 SLGALYR Unmodified 778.43374 0.43373813 4321 Q9H0B6 KLC2 Kinesin light chain 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.006 41.185 2 0.04973 44493 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.563 25.412 94654000 0 0 0 5260300 6893600 9797500 5614800 6798000 5240100 9118000 8259800 9411100 11404000 4758500 12098000 47403 4321 42516 397355;397356;397357;397358;397359;397360;397361;397362;397363;397364;397365;397366 313606 313606 1 SLGDDISSETSGDFRK Unmodified 1712.7853 0.78532236 968 P12429 ANXA3 Annexin A3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS 3.89 3.28 6 1 2 2 3 2 1 1 56.728 52.263 2;3 3.4766E-21 67591 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.27 130.27 401540000 50922000 307070000 32041000 0 0 0 0 0 0 0 0 0 7786000 3720400 0 47404 968 42517 397367;397368;397369;397370;397371;397372;397373;397374;397375 313607;313608;313609;313610;313611;313612;313613;313614;313615 313607 4 SLGEEIQESLK Unmodified 1231.6296 0.62959699 1549 P48681 NES Nestin yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 73.74 69.189 2 0.0032154 87185 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.278 33.75 37854000 0 37854000 0 0 0 0 0 0 0 0 0 0 0 0 0 47405 1549 42518 397376;397377 313616;313617;313618 313617 3 SLGEGPPANPPVPVLQSK Unmodified 1785.9625 0.96249887 2730 Q5HYK7 SH3D19 SH3 domain-containing protein 19 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76.482 75.525 2 3.1668E-26 87279 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 107.53 82.291 137930000 7603000 52739000 0 5236900 6191800 6281600 6813800 5859100 6520500 8108300 9167300 8091900 8211900 7105600 0 47406 2730 42519 397378;397379;397380;397381;397382;397383;397384;397385;397386;397387;397388;397389;397390;397391 313619;313620;313621;313622;313623;313624;313625;313626;313627;313628;313629;313630;313631 313620 11 SLGEIPIVESEIK Unmodified 1412.7763 0.77626123 1720 P53618 COPB1 Coatomer subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 83.299 82.651 2 8.3696E-05 95596 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 88.441 78.754 694310000 0 359720000 11474000 3893200 9210500 41155000 9702800 13101000 16713000 34943000 23844000 29367000 31809000 35879000 73502000 47407 1720 42520 397392;397393;397394;397395;397396;397397;397398;397399;397400;397401;397402;397403;397404;397405;397406 313632;313633;313634;313635;313636;313637;313638;313639;313640;313641;313642;313643;313644;313645;313646 313633 15 SLGEIPIVESEIKK Unmodified 1540.8712 0.87122424 1720 P53618 COPB1 Coatomer subunit beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 6.25 3.77 1 1 2 1 1 1 1 78.14 76.587 3 0.00016741 87784 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 64.798 55.262 57876000 0 6539600 11482000 11274000 0 0 0 28579000 0 0 0 0 0 0 0 47408 1720 42521 397407;397408;397409;397410 313647;313648;313649;313650 313648 3 SLGEISALTSK Unmodified 1104.6027 0.60265396 1073 P18206 VCL Vinculin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.627 62.723 2 0.0001636 70830 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 108.57 75.96 481740000 0 0 0 27734000 16009000 47783000 20709000 19995000 14380000 37678000 55325000 59578000 24481000 47943000 110130000 47409 1073 42522 397411;397412;397413;397414;397415;397416;397417;397418;397419;397420;397421;397422 313651;313652;313653;313654;313655;313656;313657;313658;313659;313660;313661 313654 7 SLGFLPK Unmodified 760.44833 0.44832557 2189 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.839 62.934 2 0.043924 73048 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 67.035 44.412 144960000 0 0 0 11197000 13966000 10951000 9141200 7669800 6732000 15684000 12689000 10190000 15509000 13187000 18045000 47410 2189 42523 397423;397424;397425;397426;397427;397428;397429;397430;397431;397432;397433;397434 313662 313662 1 SLGGESSGGTTPVGSFHTEAAR Unmodified 2103.9821 0.98212469 252 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 49.208 49.076 3 0.0053233 55421 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 27.408 22.303 15535000 0 0 0 4051700 0 0 5808000 5675600 0 0 0 0 0 0 0 47411 252 42524 397435;397436;397437 313663 313663 1 SLGGIEGCLSK Unmodified 1119.5594 0.55940893 2753 Q5R3I4 TTC38 Tetratricopeptide repeat protein 38 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 57.617 52.275 2 0.0028754 67268 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.054 44.033 45312000 0 45312000 0 0 0 0 0 0 0 0 0 0 0 0 0 47412 2753 42525 397438;397439 313664 313664 1 SLGGNDELSATFLEMK Oxidation (M) 1726.8084 0.80836599 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 1 0 By MS/MS 2 0 1 1 83.314 78.594 2 3.2953E-06 97681 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.941 81.317 21437000 0 21437000 0 0 0 0 0 0 0 0 0 0 0 0 0 47413 1601 42526 397440 313665 313665 2585 1 SLGHFENLQK Unmodified 1171.5986 0.59857163 5007 Q9ULV3 CIZ1 Cip1-interacting zinc finger protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 38.822 39.063 3 0.016626 43376 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 41.08 31.746 98626000 0 0 0 0 6014900 7951000 7319800 6705300 8960200 9406300 8774600 10356000 10302000 6574100 16262000 47414 5007 42527 397441;397442;397443;397444;397445;397446;397447;397448;397449;397450;397451 313666 313666 1 SLGLLPALR Unmodified 938.5913 0.59130141 2568 Q15735 INPP5J Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 81.95 81.991 2 0.0051747 94429 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.297 41.194 22307000 0 0 0 1293600 1523600 2062900 0 1775900 1957100 2773200 2747900 0 1661500 1961800 4549700 47415 2568 42528 397452;397453;397454;397455;397456;397457;397458;397459;397460;397461 313667;313668;313669;313670;313671;313672;313673;313674;313675 313669 9 SLGLLTTK Unmodified 831.50657 0.50656873 2600 Q16254;Q15329 E2F4;E2F5 Transcription factor E2F4;Transcription factor E2F5 yes no 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 60.145 54.161 2 0.028065 73296 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.923 38.26 65455000 37063000 22201000 6191900 0 0 0 0 0 0 0 0 0 0 0 0 47416 2600 42529 397462;397463;397464 313676;313677;313678 313677 3 SLGLQLPDGQR Unmodified 1182.6357 0.63568542 248 O15067 PFAS Phosphoribosylformylglycinamidine synthase yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 67.256 67.613 2 0.0022964 76851 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.783 64.679 8644700 0 0 0 0 0 0 0 0 0 0 0 0 0 3495200 5149500 47417 248 42530 397465;397466 313679 313679 1 SLGLQLPDGQRR Unmodified 1338.7368 0.73679645 248 O15067 PFAS Phosphoribosylformylglycinamidine synthase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 2 1 1 1 57.099 57.532 3 7.6023E-06 64470 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.522 65.974 85664000 0 0 0 0 0 0 0 0 0 0 23363000 15554000 0 17457000 29291000 47418 248 42531 397467;397468;397469;397470;397471 313680;313681;313682;313683;313684 313680 4 SLGLSDEEIVK Unmodified 1188.6238 0.62378333 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64.402 63.282 2 0.00028163 72505 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 105.4 81.968 2266500000 53625000 1783300000 17608000 20879000 19870000 31833000 26263000 22014000 19069000 37187000 41493000 53333000 27451000 35269000 77249000 47419 4819 42532 397472;397473;397474;397475;397476;397477;397478;397479;397480;397481;397482;397483;397484;397485;397486 313685;313686;313687;313688;313689;313690;313691;313692;313693;313694;313695;313696;313697;313698;313699;313700 313686 15 SLGLSRSPVVSEQTAK Unmodified 1657.8999 0.89989861 3436 Q8NEZ4 KMT2C Histone-lysine N-methyltransferase 2C yes yes 0 0 1 By MS/MS 2 0 1 1 56.498 48.35 3 0.0054924 66089 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.892 23.53 6634600 6634600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47420 3436 42533 397487 313701 313701 1 SLGLTPVDR Unmodified 956.5291 0.52909508 3065 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 48.966 48.794 2 0.011037 55224 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 63.419 25.86 27518000 0 0 0 5890900 4619300 6847700 5476600 4683600 0 0 0 0 0 0 0 47421 3065 42534 397488;397489;397490;397491;397492 313702;313703;313704;313705 313702 4 SLGNILQAK Unmodified 942.54983 0.54983053 2289 Q13428 TCOF1 Treacle protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 58.447 56.897 2 0.0052256 64038 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 79.713 20.931 406850000 72027000 37815000 8372700 0 0 27766000 0 26702000 26244000 28906000 39062000 29856000 35957000 33215000 40930000 47422 2289 42535 397493;397494;397495;397496;397497;397498;397499;397500;397501;397502;397503;397504;397505 313706;313707;313708;313709;313710;313711;313712;313713;313714;313715;313716;313717;313718;313719 313708 11 SLGNILQAKPTSSPAK Unmodified 1610.8992 0.89917033 2289 Q13428 TCOF1 Treacle protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.56 1.83 1 17 1 2 2 1 1 2 1 1 1 2 2 2 55.698 55.292 2;3 7.2145E-22 62029 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 118.48 58.05 334940000 11466000 0 0 33580000 24044000 6654500 30165000 38225000 9784200 26624000 34310000 50448000 39260000 30381000 0 47423 2289 42536 397506;397507;397508;397509;397510;397511;397512;397513;397514;397515;397516;397517;397518;397519;397520;397521;397522;397523 313720;313721;313722;313723;313724;313725;313726;313727;313728;313729;313730;313731;313732;313733;313734;313735 313731 14 SLGNVIDPLDVIYGISLQGLHNQLLNSNLDPSEVEK Unmodified 3903.0266 0.026562272 1210 P26640 VARS Valine--tRNA ligase yes yes 0 0 0 By MS/MS 3 0 1 1 102.26 98.702 3 0.0013374 118611 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 25.859 21.144 2062000 0 2062000 0 0 0 0 0 0 0 0 0 0 0 0 0 47424 1210 42537 397524 313736 313736 1 SLGNVIHPDVVVNGGQDQSK Unmodified 2062.0443 0.044331016 4626 Q9NSE4 IARS2 Isoleucine--tRNA ligase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 70.394 64.817 3 0.0014387 79612 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 30.19 19.815 113140000 22863000 75150000 15131000 0 0 0 0 0 0 0 0 0 0 0 0 47425 4626 42538 397525;397526;397527;397528 313737;313738;313739;313740 313740 4 SLGPAAPIIDSPYGDPIDPEDAPESITR Unmodified 2892.4029 0.4028981 4333 Q9H0L4 CSTF2T Cleavage stimulation factor subunit 2 tau variant yes yes 0 0 0 By MS/MS 10 0 1 1 89.329 89.473 3 2.3851E-05 103538 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 31.37 28.793 5593200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5593200 47426 4333 42539 397529 313741 313741 1 SLGPGAGPR Unmodified 810.4348 0.43480077 1988 P78549 NTHL1 Endonuclease III-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 18.807 19.022 2 0.014114 19334 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 58.782 21.623 72337000 0 0 0 6176200 4620800 0 6445900 5217200 3987700 9432000 6060300 9472600 7593200 4773400 8558100 47427 1988 42540 397530;397531;397532;397533;397534;397535;397536;397537;397538;397539;397540 313742;313743;313744;313745;313746 313743 5 SLGPPGPPFNITPR Unmodified 1448.7776 0.77759863 4773 Q9NZM1 MYOF Myoferlin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 80.771 80.74 2 0.0016384 93213 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 47.288 37.953 21078000 0 0 0 1849900 2604000 2850300 3527300 0 0 3209400 0 0 3663900 3373700 0 47428 4773 42541 397541;397542;397543;397544;397545;397546;397547;397548;397549 313747;313748;313749;313750;313751;313752 313747 6 SLGPPQGEEDSVPR Unmodified 1466.7001 0.70013617 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 2 1 1 1 1 2 1 45.19 45.364 2 0.00037909 51048 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 91.961 78.142 945190000 0 0 0 39047000 41068000 64517000 48356000 35927000 73867000 60333000 75856000 108940000 80262000 163770000 153240000 47429 1986 42542 397550;397551;397552;397553;397554;397555;397556;397557;397558;397559;397560;397561;397562;397563 313753;313754;313755;313756;313757;313758;313759;313760;313761;313762;313763 313758 9 SLGPPQGEEDSVPRDLPSWMK Oxidation (M) 2340.1056 0.10561064 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 74.535 74.52 3 2.9502E-12 85162 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 83.213 75.221 84616000 0 0 0 5742500 8280800 0 0 0 0 16711000 14445000 14746000 9140400 15551000 0 47430 1986 42543 397564;397565;397566;397567;397568;397569;397570 313764;313765;313766;313767;313768;313769;313770;313771 313767 3236 8 SLGPPQGEEDSVPRDLPSWMK Unmodified 2324.1107 0.11069602 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 1 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 80.294 80.467 3 2.5676E-05 92728 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.09 40.79 43007000 0 0 0 0 0 0 0 3025500 0 0 0 4462700 0 8497300 27021000 47431 1986 42543 397571;397572;397573;397574 313772 313772 0 SLGQNPTEAELR Unmodified 1313.6575 0.65754307 1218 P27482 CALML3 Calmodulin-like protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 42.053 42.184 2 3.0444E-08 47769 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 130.79 94.455 51739000 0 0 0 32803000 0 0 0 13464000 0 0 0 5472000 0 0 0 47432 1218 42544 397575;397576;397577 313773;313774;313775;313776;313777 313776 4 SLGQPPLELLK Unmodified 1193.702 0.70197407 3009 Q6ZS30 NBEAL1 Neurobeachin-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 85.719 82.093 2 0.0046042 102111 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.986 52.461 56955000 0 55164000 1791200 0 0 0 0 0 0 0 0 0 0 0 0 47433 3009 42545 397578;397579 313778 313778 1 SLGQWLQEEK Unmodified 1216.6088 0.60880197 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 7.6 3.67 3 7 1 1 1 1 1 1 1 1 1 1 71.173 69.76 2 0.00010047 86541 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 140.83 82.716 178320000 82038000 59239000 10038000 0 0 0 1133400 0 2623800 2547700 4064100 3794500 0 3144400 9693500 47434 1300 42546 397580;397581;397582;397583;397584;397585;397586;397587;397588;397589 313779;313780;313781;313782;313783;313784;313785 313783 7 SLGSADELFK Unmodified 1065.5342 0.53424004 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 71.012 65.101 2 0.0057936 80389 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 97.431 66.818 263640000 9207400 248130000 6300000 0 0 0 0 0 0 0 0 0 0 0 0 47435 2495 42547 397590;397591;397592 313786;313787;313788 313788 2 SLGSAGPSGTLPR Unmodified 1198.6306 0.63060004 3542 Q8WUF5 PPP1R13L RelA-associated inhibitor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.364 42.54 2 9.1237E-20 46849 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 155.11 87.099 557900000 0 0 0 36002000 27649000 35356000 38154000 41581000 29710000 59533000 56037000 50119000 63441000 43446000 76869000 47436 3542 42548 397593;397594;397595;397596;397597;397598;397599;397600;397601;397602;397603;397604 313789;313790;313791;313792;313793;313794;313795;313796;313797;313798;313799;313800;313801 313799 13 SLGSALKPGEGR Unmodified 1170.6357 0.63568542 2370 Q14134 TRIM29 Tripartite motif-containing protein 29 yes yes 0 0 1 By matching By MS/MS By matching By MS/MS By matching 10 0 5 1 1 1 1 1 27.938 28.082 3 0.035497 30204 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 32.068 16.312 60558000 0 0 0 12688000 0 0 0 12948000 8602100 0 0 0 11962000 14357000 0 47437 2370 42549 397605;397606;397607;397608;397609 313802 313802 1 SLGSELFR Unmodified 907.47633 0.47633123 3937 Q96NG8 ZNF582 Zinc finger protein 582 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 62.56 62.654 2 0.0091721 72891 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 83.753 18.995 309570000 0 0 0 17481000 12051000 26695000 0 31044000 17990000 27838000 26350000 27706000 30326000 31966000 60126000 47438 3937 42550 397610;397611;397612;397613;397614;397615;397616;397617;397618;397619;397620 313803;313804;313805;313806 313806 3 SLGSSDLK Unmodified 805.41815 0.41814765 2900 Q6NVY1 HIBCH 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 22.443 18.56 2 0.03306 24379 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.665 6.6298 29980000 0 29980000 0 0 0 0 0 0 0 0 0 0 0 0 0 47439 2900 42551 397621 313807 313807 1 SLGSSHSNSSSSSLTEK Unmodified 1693.7755 0.77548596 2729 Q5HYJ3 FAM76B Protein FAM76B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15.148 14.575 3 6.1956E-27 21470 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.67 89.523 179420000 68712000 13321000 18755000 6992100 4260400 7128900 5202300 6603900 4727400 7967400 8269000 6597500 5226500 5805200 9852600 47440 2729 42552 397622;397623;397624;397625;397626;397627;397628;397629;397630;397631;397632;397633;397634;397635;397636 313808;313809;313810;313811;313812;313813;313814;313815;313816;313817;313818;313819;313820;313821;313822 313814 14 SLGSTAGTDITVNSVILLPK Unmodified 1985.1045 0.10447166 2658 Q2TAY7 SMU1 WD40 repeat-containing protein SMU1;WD40 repeat-containing protein SMU1, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 93.003 87.836 2 1.5637E-12 110418 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.61 116.91 47154000 8837300 34021000 4295600 0 0 0 0 0 0 0 0 0 0 0 0 47441 2658 42553 397637;397638;397639 313823;313824 313823 2 SLGSTDSGYFSR Unmodified 1275.5731 0.57314474 1026 P15822 HIVEP1 Zinc finger protein 40 yes yes 0 0 0 By MS/MS 10 0 1 1 47.112 47.169 2 0.018045 53189 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 41.704 24.934 2478000 0 0 0 0 0 0 2478000 0 0 0 0 0 0 0 0 47442 1026 42554 397640 313825 313825 1 SLGSVQAPSYGAR Unmodified 1291.6521 0.65206377 814 P05783 KRT18 Keratin, type I cytoskeletal 18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.063 46.231 2 5.3231E-13 51733 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 135.86 103.05 850000000 0 0 0 41331000 64055000 82631000 48921000 70591000 28164000 83636000 77957000 116670000 80033000 64169000 91841000 47443 814 42555 397641;397642;397643;397644;397645;397646;397647;397648;397649;397650;397651;397652 313826;313827;313828;313829;313830;313831;313832;313833;313834;313835;313836;313837 313832 12 SLGSVQAPSYGARPVSSAASVYAGAGGSGSR Unmodified 2853.4005 0.40054711 814 P05783 KRT18 Keratin, type I cytoskeletal 18 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.623 67.695 3 1.1164E-228 77609 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 167.87 161.44 638540000 0 0 0 11735000 39695000 53609000 37964000 90277000 27639000 78283000 53790000 79002000 17670000 0 148870000 47444 814 42556 397653;397654;397655;397656;397657;397658;397659;397660;397661;397662;397663;397664 313838;313839;313840;313841;313842;313843;313844;313845;313846;313847;313848;313849;313850;313851;313852;313853 313839 16 SLGSVQLINDR Unmodified 1200.6463 0.64625011 37;3836 A8MPP1;Q96FC9 DDX11L8;DDX11 Putative ATP-dependent RNA helicase DDX11-like protein 8;Probable ATP-dependent RNA helicase DDX11 no no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 60.686 60.747 2 0.0016934 69395 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 87.149 52.943 56005000 0 0 0 3014200 3903600 6425600 4150200 4477500 3039200 6713800 6814900 7707100 5177700 4581600 0 47445 37;3836 42557 397665;397666;397667;397668;397669;397670;397671;397672;397673;397674;397675 313854;313855;313856;313857;313858;313859;313860 313858 7 SLGTADVHFER Unmodified 1230.5993 0.59929991 3162 Q86V81 ALYREF THO complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 1 2 2 2 2 2 2 1 2 2 2 45.696 45.87 2;3 0.00018929 51661 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 77.593 58.848 1312000000 0 0 0 101260000 15163000 118650000 124410000 111280000 100340000 121940000 128080000 155660000 111070000 78445000 145690000 47446 3162 42558 397676;397677;397678;397679;397680;397681;397682;397683;397684;397685;397686;397687;397688;397689;397690;397691;397692;397693;397694;397695;397696;397697 313861;313862;313863;313864;313865;313866;313867;313868;313869;313870;313871;313872;313873;313874;313875;313876;313877;313878;313879;313880 313875 16 SLGTADVHFERK Unmodified 1358.6943 0.69426293 3162 Q86V81 ALYREF THO complex subunit 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 1 2 2 2 2 2 2 2 2 1 2 35.456 35.662 2;3 2.2897E-07 39453 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 129.88 103.94 2691200000 0 0 0 159670000 111430000 262300000 189820000 198830000 224450000 163460000 231140000 446130000 231050000 125480000 347430000 47447 3162 42559 397698;397699;397700;397701;397702;397703;397704;397705;397706;397707;397708;397709;397710;397711;397712;397713;397714;397715;397716;397717;397718;397719 313881;313882;313883;313884;313885;313886;313887;313888;313889;313890;313891;313892;313893;313894;313895;313896;313897;313898;313899;313900;313901;313902 313882 17 SLGTGAPVIESPYGETISPEDAPESISK Unmodified 2830.376 0.37601465 1329 P33240 CSTF2 Cleavage stimulation factor subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 83.037 82.01 3 7.3153E-67 97232 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 123.53 117.55 752440000 11941000 498190000 0 2034300 13802000 10814000 10555000 11334000 9594000 27436000 18983000 25627000 18784000 27785000 65570000 47448 1329 42560 397720;397721;397722;397723;397724;397725;397726;397727;397728;397729;397730;397731;397732;397733;397734 313903;313904;313905;313906;313907;313908;313909;313910;313911;313912;313913;313914;313915;313916;313917 313910 15 SLGTIQQCCDAIDHLCR Unmodified 2045.9081 0.90811358 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS 2 0 1 1 71.694 68.411 3 0.00062453 84047 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 58.671 55.009 3113700 0 0 3113700 0 0 0 0 0 0 0 0 0 0 0 0 47449 1986 42561 397735 313918 313918 1 SLGTQPPK Unmodified 826.45487 0.45486751 2458 Q14978 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS 6.25 3.77 1 1 2 2 1 1 16.254 14.514 2 0.016583 18456 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.9 48.834 109260000 0 96465000 0 0 0 2484000 0 10310000 0 0 0 0 0 0 0 47450 2458 42562 397736;397737;397738;397739 313919;313920 313919 2 SLGTQPPKK Unmodified 954.54983 0.54983053 2458 Q14978 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes yes 0 0 1 By MS/MS By matching By MS/MS 2 0 3 1 1 1 11.77 8.6121 2 0.019443 13555 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.997 50.823 133090000 103290000 15030000 14768000 0 0 0 0 0 0 0 0 0 0 0 0 47451 2458 42563 397740;397741;397742 313921;313922 313921 0 SLGVDMDDK Unmodified 978.43281 0.43281144 4263 Q9BZE4 GTPBP4 Nucleolar GTP-binding protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 17.264 13.844 2 0.014175 18191 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.305 21.517 11840000 0 11840000 0 0 0 0 0 0 0 0 0 0 0 0 0 47452 4263 42564 397743 313923 313923 1 SLGVDSQIK Unmodified 945.51311 0.51311067 5085 Q9Y263 PLAA Phospholipase A-2-activating protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 36.721 35.616 2 0.0064721 43592 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 107.9 45.237 704950000 21989000 475360000 10410000 7535300 6919500 22570000 11809000 9487400 7452600 18829000 25142000 17315000 15261000 18486000 36381000 47453 5085 42565 397744;397745;397746;397747;397748;397749;397750;397751;397752;397753;397754;397755;397756;397757;397758;397759 313924;313925;313926;313927;313928;313929;313930;313931;313932 313929 8 SLGVLPFTLNSGSPEK Unmodified 1644.8723 0.87228688 1463 P42695 NCAPD3 Condensin-2 complex subunit D3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 86.868 86.975 2 7.5822E-06 100918 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 103.44 87.55 59145000 0 0 0 0 3394400 6100000 3771200 4224200 3322200 7209300 3567200 8547200 3748800 4597400 10663000 47454 1463 42566 397760;397761;397762;397763;397764;397765;397766;397767;397768;397769;397770 313933;313934;313935;313936;313937;313938;313939;313940;313941;313942;313943;313944 313934 11 SLGVTQLAVAVNK Unmodified 1298.7558 0.75580056 5184 Q9Y450 HBS1L HBS1-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 74.296 74.455 2 9.1718E-08 85763 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 98.048 72.24 63009000 0 0 0 0 0 4672700 5967800 5054500 5685600 6932300 0 10167000 5545000 7964100 11020000 47455 5184 42567 397771;397772;397773;397774;397775;397776;397777;397778;397779;397780;397781 313945;313946;313947;313948;313949;313950;313951;313952;313953;313954 313947 10 SLGYAYVNFQQPADAER Unmodified 1927.9064 0.90644055 958;2268 Q13310;P11940 PABPC4;PABPC1 Polyadenylate-binding protein 4;Polyadenylate-binding protein 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 76.037 76.096 2;3 0 87337 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 271.01 258.62 1156800000 0 0 0 24095000 57461000 83039000 53987000 76261000 68459000 142660000 132440000 185760000 63698000 90314000 178620000 47456 2268;958 42568 397782;397783;397784;397785;397786;397787;397788;397789;397790;397791;397792;397793;397794;397795;397796;397797;397798;397799;397800;397801;397802;397803;397804;397805 313955;313956;313957;313958;313959;313960;313961;313962;313963;313964;313965;313966;313967;313968;313969;313970 313959 14 SLGYLCGLVSEK Unmodified 1324.6697 0.66968766 1543 P48553 TRAPPC10 Trafficking protein particle complex subunit 10 yes yes 0 0 0 By MS/MS 2 0 1 1 84.758 76.627 2 0.012358 100074 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.353 41.567 4297500 4297500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47457 1543 42569 397806 313971 313971 1 SLHAEELVGR Unmodified 1109.5829 0.58292157 1602 P49815 TSC2 Tuberin yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 38.026 38.217 2 0.037846 41283 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 40.724 8.4037 15456000 0 0 0 0 0 2563900 0 3322500 2138900 0 0 0 3309800 4121400 0 47458 1602 42570 397807;397808;397809;397810;397811 313972 313972 1 SLHDAIMIVR Oxidation (M) 1169.6227 0.62267789 4065 Q99832 CCT7 T-complex protein 1 subunit eta yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 3 1 1 2 3 2 2 3 2 2 52.604 52.856 2;3 0.00099081 59495 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 90.657 59.583 1707400000 0 0 0 0 36852000 205100000 48606000 68010000 72893000 200390000 207660000 254550000 193840000 154120000 265420000 47459 4065 42571 397812;397813;397814;397815;397816;397817;397818;397819;397820;397821;397822;397823;397824;397825;397826;397827;397828;397829;397830;397831;397832;397833 313973;313974;313975;313976;313977;313978;313979;313980;313981;313982;313983;313984;313985;313986 313980 5571 13 SLHDAIMIVR Unmodified 1153.6278 0.62776327 4065 Q99832 CCT7 T-complex protein 1 subunit eta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 1 2 1 1 1 1 2 62.319 62.454 2;3 0.0044432 72068 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 52.579 30.586 235580000 0 0 0 6394600 6520600 19517000 10239000 22325000 6872800 21967000 12974000 21843000 12004000 18019000 76905000 47460 4065 42571 397834;397835;397836;397837;397838;397839;397840;397841;397842;397843;397844;397845;397846;397847 313987;313988;313989;313990;313991;313992;313993;313994;313995;313996;313997;313998;313999;314000;314001 313998 14 SLHDAIMIVRR Unmodified 1309.7289 0.7288743 4065 Q99832 CCT7 T-complex protein 1 subunit eta yes yes 0 0 1 By MS/MS 10 0 1 1 53.829 54.487 3 0.0035991 60887 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.266 30.753 8480900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8480900 47461 4065 42572 397848 314002 314002 1 SLHDALCVIR Unmodified 1182.6179 0.61792687 1548 P48643 CCT5 T-complex protein 1 subunit epsilon yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 2 1 1 2 2 2 2 3 3 57.307 57.565 2;3 0.0056525 63376 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.955 0 263380000 0 0 0 0 8822400 34332000 15040000 18664000 0 21863000 17951000 21610000 16352000 31028000 77715000 47462 1548 42573 397849;397850;397851;397852;397853;397854;397855;397856;397857;397858;397859;397860;397861;397862;397863;397864;397865;397866;397867 314003;314004;314005;314006;314007;314008;314009;314010;314011;314012;314013;314014;314015 314006 13 SLHDALCVLAQTVK Unmodified 1553.8236 0.82356254 1980 P78371 CCT2 T-complex protein 1 subunit beta yes yes 0 0 0 By MS/MS 10 0 1 1 85.092 85.271 3 0.0011161 98432 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.335 52.341 10262000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10262000 47463 1980 42574 397868 314016 314016 1 SLHDALCVVK Unmodified 1140.5961 0.59612879 1067 P17987 TCP1 T-complex protein 1 subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 1 2 1 2 2 2 2 2 2 2 2 48.758 48.954 2;3 0.00054669 54039 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 125.82 103.04 602330000 0 0 0 20349000 17612000 59585000 19025000 26590000 37653000 54916000 69294000 69899000 38719000 57136000 131550000 47464 1067 42575 397869;397870;397871;397872;397873;397874;397875;397876;397877;397878;397879;397880;397881;397882;397883;397884;397885;397886;397887;397888;397889;397890 314017;314018;314019;314020;314021;314022;314023;314024;314025;314026;314027;314028;314029;314030;314031;314032;314033;314034 314022 16 SLHHPNIVGYR Unmodified 1291.6786 0.67855329 3905 Q96KB5 PBK Lymphokine-activated killer T-cell-originated protein kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 34.848 35.086 3 0.00022845 38393 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 79.23 63.672 355870000 0 0 0 10124000 0 53697000 14207000 16095000 15753000 19795000 24713000 36681000 30583000 29687000 104540000 47465 3905 42576 397891;397892;397893;397894;397895;397896;397897;397898;397899;397900;397901 314035;314036;314037;314038;314039;314040;314041;314042 314035 5 SLHINGGGSAAEQREK Unmodified 1652.823 0.82304527 586 O94804 STK10 Serine/threonine-protein kinase 10 yes yes 0 0 1 By MS/MS 2 0 1 1 24.071 19.095 3 0.00071004 27115 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.537 47.255 21992000 21992000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47466 586 42577 397902 314043 314043 1 SLHPWYGITPTSSPK Unmodified 1669.8464 0.84640648 3322 Q8N3F8 MICALL1 MICAL-like protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 77.2 69.069 3 0.0041608 90991 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.545 28.222 10844000 10844000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47467 3322 42578 397903 314044 314044 1 SLHQAIEGDTSGDFLK Unmodified 1716.8319 0.83187862 857 P08133 ANXA6 Annexin A6 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 67.454 62.643 2;3 4.5924E-23 80823 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.92 97.413 36712000 0 19746000 16966000 0 0 0 0 0 0 0 0 0 0 0 0 47468 857 42579 397904;397905 314045;314046 314045 2 SLHQVEISHCDAK Unmodified 1522.7198 0.71982575 5103 Q9Y2I1 NISCH Nischarin yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 28.245 23.907 3 0.0026491 34005 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.231 77.254 16234000 14195000 0 2039200 0 0 0 0 0 0 0 0 0 0 0 0 47469 5103 42580 397906;397907 314047 314047 0 SLHSAGPPLLAVTAAPPAQPLAK Unmodified 2206.2474 0.24738792 1189 P25440 BRD2 Bromodomain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81.131 80.428 3 2.8794E-15 103081 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.831 85.392 214920000 37516000 0 3128000 5003100 7625400 13814000 10680000 9632400 11143000 25836000 18022000 20220000 7064500 12672000 32564000 47470 1189 42581 397908;397909;397910;397911;397912;397913;397914;397915;397916;397917;397918;397919;397920;397921 314048;314049;314050;314051;314052;314053;314054;314055;314056;314057;314058;314059;314060;314061;314062;314063;314064;314065;314066 314055 19 SLHSAHSLASR Unmodified 1164.6 0.59996862 242 O15027 SEC16A Protein transport protein Sec16A yes yes 0 0 0 By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 9.8964 10.044 3 0.0028152 8256 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 91.961 65.844 83540000 0 0 0 4875700 4410900 0 6745700 4599300 4331400 8243600 10223000 13482000 8505900 9418200 8704800 47471 242 42582 397922;397923;397924;397925;397926;397927;397928;397929;397930;397931;397932 314067;314068;314069;314070;314071 314070 1 SLHSATTIGNK Unmodified 1127.5935 0.59348625 1663 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 14.151 14.254 2 1.1695E-199 13880 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 244.61 193.81 146920000 0 0 0 10272000 15275000 13929000 14334000 13184000 9956500 0 22789000 0 24677000 22499000 0 47472 1663 42583 397933;397934;397935;397936;397937;397938;397939;397940;397941;397942;397943 314072;314073;314074;314075;314076;314077;314078;314079;314080;314081;314082 314079 11 SLHSCSVK Unmodified 916.44365 0.44365089 604 O94916 NFAT5 Nuclear factor of activated T-cells 5 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 7.4516 4.5853 2 0.0024122 8087 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 125.81 88.168 65624000 57318000 0 8306600 0 0 0 0 0 0 0 0 0 0 0 0 47473 604 42584 397944;397945 314083 314083 1 SLHSVVQTLESDK Unmodified 1441.7413 0.7412727 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 4 2 2 73.782 66.945 2;3 2.6778E-64 87438 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 209.85 190.61 303900000 176300000 127600000 0 0 0 0 0 0 0 0 0 0 0 0 0 47474 1286 42585 397946;397947;397948;397949 314084;314085;314086;314087;314088 314087 3 SLHTLFGDELCK Unmodified 1418.6864 0.68640036 65 CON__P02769 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71.708 70.855 3 4.0021E-05 93801 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.156 91.72 + 314920000 44008000 38430000 0 10319000 11054000 19538000 8690400 12034000 22470000 24721000 27094000 26893000 12911000 12492000 44267000 47475 65 42586 397950;397951;397952;397953;397954;397955;397956;397957;397958;397959;397960;397961;397962;397963 314089;314090;314091;314092;314093;314094;314095;314096;314097;314098;314099;314100;314101;314102;314103;314104 314096 13 SLHTLFGDK Unmodified 1016.5291 0.52909508 64 CON__P02768-1;P02768 ALB Serum albumin yes no 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 47.329 47.335 2 1.1519E-13 53276 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 168.27 105.55 + 442100000 0 0 0 153980000 7924800 16124000 10109000 173050000 15637000 19150000 0 0 36070000 10053000 0 47476 64 42587 397964;397965;397966;397967;397968;397969;397970;397971;397972 314105;314106;314107;314108;314109;314110;314111;314112;314113 314107 8 SLHVTYNQK Unmodified 1088.5615 0.56145784 3347 Q8N5I4 DHRSX Dehydrogenase/reductase SDR family member on chromosome X yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 9 2.65 1 7 1 1 1 1 1 1 1 1 21.594 21.785 2 0.020109 21552 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 53.404 17.786 37218000 0 0 0 0 4868600 0 3716200 0 4672200 0 0 0 9232300 9017800 5710900 47477 3347 42588 397973;397974;397975;397976;397977;397978;397979;397980 314114;314115;314116;314117 314117 4 SLIATVEK Unmodified 859.50148 0.50148335 2332 Q13620 CUL4B Cullin-4B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44.439 43.409 2 0.014312 48738 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 70.69 14.788 594870000 17800000 333700000 27848000 9203800 7786300 21136000 14684000 10907000 8275800 17961000 28811000 29382000 19468000 17556000 30352000 47478 2332 42589 397981;397982;397983;397984;397985;397986;397987;397988;397989;397990;397991;397992;397993;397994;397995 314118;314119;314120;314121;314122;314123;314124;314125 314118 8 SLICSISNEVPEHPCVSPVSNHVYER Acetyl (Protein N-term) 3050.4226 0.42260446 5017 Q9UMS4 PRPF19 Pre-mRNA-processing factor 19 yes yes 1 0 0 By MS/MS 10 0 1 1 84.421 84.6 3 4.653E-34 97656 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.397 75.149 9268800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9268800 47479 5017 42590 397996 314126 314126 1 SLIDQFFGVEFETTMK Oxidation (M) 1906.9023 0.90226638 1741 P54578 USP14 Ubiquitin carboxyl-terminal hydrolase 14 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 98.271 94.744 2 7.7339E-13 117381 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 103.85 81.98 3360700 3360700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47480 1741 42591 397997;397998 314127;314128 314128 2830 2 SLIDQFFGVEFETTMK Unmodified 1890.9074 0.90735175 1741 P54578 USP14 Ubiquitin carboxyl-terminal hydrolase 14 yes yes 0 0 0 By MS/MS 2 0.816 1 1 1 3 95.838 93.7 2 1.4347E-56 118873 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 202.32 174.89 32881000 32881000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47481 1741 42591 397999;398000;398001 314129;314130 314130 2 SLIEEGGDWDRR Unmodified 1431.6743 0.67425577 2471 Q15008 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 2 1 2 1 2 1 1 2 51.921 52.147 2;3 0.0012033 57933 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 59.57 54.804 304960000 0 0 0 16178000 14979000 50519000 0 0 7155400 52245000 18633000 88015000 9178900 9539600 38521000 47482 2471 42592 398002;398003;398004;398005;398006;398007;398008;398009;398010;398011;398012;398013;398014;398015 314131;314132;314133;314134;314135;314136;314137;314138;314139;314140 314137 8 SLIGSPGR Unmodified 785.43955 0.43955179 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.381 28.576 2 0.015415 30678 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 68.915 43.916 120300000 0 0 0 5481900 7124900 7758200 9796100 6980500 6629100 10350000 12511000 12570000 11316000 11267000 18516000 47483 5262 42593 398016;398017;398018;398019;398020;398021;398022;398023;398024;398025;398026;398027 314141;314142;314143;314144;314145 314143 5 SLIGVEYK Unmodified 907.50148 0.50148335 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.496 52.639 2 0.034963 58298 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.786 21.728 70496000 0 0 0 2024300 1401100 11636000 1903900 3272300 5555900 8548500 5914500 6696600 3546100 6005900 13992000 47484 848 42594 398028;398029;398030;398031;398032;398033;398034;398035;398036;398037;398038;398039 314146;314147;314148;314149;314150 314147 5 SLIGVEYKPVSATGAEDK Unmodified 1862.9626 0.96255845 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 6 2 20 2 4 2 2 1 2 2 2 1 2 2 2 2 1 1 63.722 62.117 2;3 2.2173E-60 70478 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 167.98 154.18 2645400000 134860000 943100000 334250000 41281000 44096000 107930000 69156000 77533000 56585000 145730000 151780000 175400000 65080000 90953000 207680000 47485 848 42595 398040;398041;398042;398043;398044;398045;398046;398047;398048;398049;398050;398051;398052;398053;398054;398055;398056;398057;398058;398059;398060;398061;398062;398063;398064;398065;398066;398067 314151;314152;314153;314154;314155;314156;314157;314158;314159;314160;314161;314162;314163;314164;314165;314166;314167;314168;314169;314170;314171;314172;314173;314174;314175;314176;314177 314167 25 SLIIDEGEDDLGRGGHPLSK Unmodified 2107.0546 0.054561351 194 O14618 CCS Copper chaperone for superoxide dismutase yes yes 0 0 1 By MS/MS 2 0 1 1 73.882 65.686 4 3.1327E-08 86975 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.794 64.962 20988000 20988000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47486 194 42596 398068 314178 314178 1 SLIINTFYSNK Unmodified 1298.6871 0.68705229 2715 Q58FF6 HSP90AB4P Putative heat shock protein HSP 90-beta 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 77.672 77.103 2 5.0479E-11 89395 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 154.56 123.99 11421000000 47624000 0 0 315890000 288810000 1325700000 601940000 523650000 554100000 1058400000 1146100000 964030000 635080000 816420000 3143000000 47487 2715 42597 398069;398070;398071;398072;398073;398074;398075;398076;398077;398078;398079;398080;398081 314179;314180;314181;314182;314183;314184;314185;314186;314187;314188;314189;314190;314191;314192;314193;314194;314195;314196;314197;314198;314199;314200;314201;314202;314203;314204;314205;314206 314194 28 SLILTALQR Unmodified 1013.6233 0.62332982 3522 Q8TEX9 IPO4 Importin-4 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.329 76.387 2 0.0074164 88023 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 72.485 37.129 133500000 0 0 0 5836600 5710700 14039000 9445800 10165000 6132300 13615000 12663000 11026000 9434700 10230000 25206000 47488 3522 42598 398082;398083;398084;398085;398086;398087;398088;398089;398090;398091;398092;398093 314207;314208;314209;314210;314211;314212;314213;314214;314215;314216;314217 314208 11 SLIPDIK Unmodified 784.46945 0.46945494 4976 Q9UKV3 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 66.664 66.117 2 0.03326 75425 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 72.138 25.768 112330000 0 60291000 0 3756400 3565500 0 5571800 4291900 5912700 6940300 7102500 0 7150800 7744200 0 47489 4976 42599 398094;398095;398096;398097;398098;398099;398100;398101;398102;398103 314218;314219 314218 2 SLIPSWNK Unmodified 943.51272 0.51271674 3337 Q8N543 OGFOD1 Prolyl 3-hydroxylase OGFOD1 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 72.709 68.791 2 0.026252 90630 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.469 36.554 76720000 72666000 0 0 0 0 0 0 0 0 0 4053600 0 0 0 0 47490 3337 42600 398104;398105 314220;314221 314220 2 SLIPSYIR Unmodified 947.54402 0.54401687 1105;4611 P20340;Q9NRW1 RAB6A;RAB6B Ras-related protein Rab-6A;Ras-related protein Rab-6B no no 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 72.1 72.154 2 0.033141 83003 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 53.891 24.552 58004000 0 0 0 5369100 2695100 5251100 0 7784900 0 5151400 6661700 7493500 4174100 4810100 8613200 47491 1105;4611 42601 398106;398107;398108;398109;398110;398111;398112;398113;398114;398115 314222;314223;314224 314224 3 SLISMDEINK Oxidation (M) 1164.5696 0.56963927 4031 Q99598 TSNAX Translin-associated protein X yes yes 0 1 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 45.869 45.973 2 0.002231 51665 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 76.679 60.476 35110000 0 0 0 4595600 0 7319100 5363500 3938600 0 6246100 0 7646800 0 0 0 47492 4031 42602 398116;398117;398118;398119;398120;398121;398122 314225;314226;314227;314228;314229 314226 5532 5 SLISMDEINK Unmodified 1148.5747 0.57472465 4031 Q99598 TSNAX Translin-associated protein X yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 61.872 61.659 2;3 0.0049755 73981 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.816 48.856 103610000 0 1135900 0 4597800 3928300 8968100 4365600 7707300 4046400 9459000 10788000 12002000 6298400 8784300 21527000 47493 4031 42602 398123;398124;398125;398126;398127;398128;398129;398130;398131;398132;398133;398134;398135 314230;314231;314232;314233;314234;314235;314236;314237;314238;314239;314240 314233 9 SLITGPSK Unmodified 801.45962 0.45961853 488 O75376 NCOR1 Nuclear receptor corepressor 1 yes yes 0 0 0 By MS/MS 2 0 1 1 31.837 25.993 2 0.01948 36672 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.833 26.475 61083000 61083000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47494 488 42603 398136 314241;314242 314242 2 SLIVAGLGDGSIR Unmodified 1256.7089 0.70885036 3304 Q8N122 RPTOR Regulatory-associated protein of mTOR yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 76.843 77.047 2 0.0073409 88129 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 60.641 36.611 10029000 0 0 0 0 0 0 0 0 0 0 0 0 0 3203600 6825400 47495 3304 42604 398137;398138 314243;314244 314244 2 SLKDEDVLQK Unmodified 1173.6241 0.62411768 4756 Q9NZ01 TECR Very-long-chain enoyl-CoA reductase yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 32.124 31.723 3 0.018892 35045 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 43.77 27.193 13201000 0 0 0 7206300 5994800 0 0 0 0 0 0 0 0 0 0 47496 4756 42605 398139;398140 314245 314245 1 SLKPDKPDSEEQAK Unmodified 1570.7839 0.7838658 4859 Q9UBT7 CTNNAL1 Alpha-catulin yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 11.295 11.217 3 0.020785 14350 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 51.092 38.296 48238000 0 0 10812000 1651400 0 3547700 4543500 2495500 2109800 4201600 0 5363400 3835100 3885800 5793100 47497 4859 42606 398141;398142;398143;398144;398145;398146;398147;398148;398149;398150;398151 314246;314247 314247 1 SLKPESGGNHIADLK Unmodified 1564.8209 0.82092001 1159 P23458 JAK1 Tyrosine-protein kinase JAK1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 40.314 35.202 3 0.0047297 48936 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.823 34.793 22423000 20967000 0 1456300 0 0 0 0 0 0 0 0 0 0 0 0 47498 1159 42607 398152;398153 314248;314249 314249 2 SLLAGLLK Unmodified 813.53239 0.53238955 1305 P31751 AKT2 RAC-beta serine/threonine-protein kinase yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 81.924 81.993 2 0.038617 94531 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.966 6.355 14266000 0 0 0 0 1199700 2641100 0 1408700 0 0 0 2627000 0 2060200 4328900 47499 1305 42608 398154;398155;398156;398157;398158;398159 314250 314250 1 SLLASLHTSR Unmodified 1083.6037 0.60365701 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 47.626 48.358 2 0.010972 53470 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.064 22.999 8000900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8000900 47500 2775 42609 398160;398161 314251;314252 314251 2 SLLATMK Oxidation (M) 778.42588 0.42587556 1029 P15924 DSP Desmoplakin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 23.896 24.059 2 0.017456 25845 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 78.616 59.81 241230000 0 0 0 63466000 12027000 11726000 14170000 43853000 9135000 13521000 15902000 24033000 23867000 9530700 0 47501 1029 42610 398162;398163;398164;398165;398166;398167;398168;398169;398170;398171;398172 314253;314254;314255;314256;314257;314258;314259;314260 314259 1446 8 SLLATMK Unmodified 762.43096 0.43096094 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 6 4 2 2 1 1 1 1 47.805 44.271 2 0.024937 49375 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 81.784 53.53 332910000 4749200 37593000 0 131060000 0 0 0 159510000 0 0 0 0 0 0 0 47502 1029 42610 398173;398174;398175;398176 314261;314262;314263 314262 3 SLLDACESR Unmodified 1049.4812 0.48115861 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 37.384 37.652 2 0.013737 40394 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.35 36.825 39684000 0 0 0 0 0 5850800 4437700 0 0 7296700 0 0 5309300 4413200 12376000 47503 2047 42611 398177;398178;398179;398180;398181;398182 314264;314265 314265 2 SLLDANFEPGK Unmodified 1189.5979 0.59790293 3903 Q96K76 USP47 Ubiquitin carboxyl-terminal hydrolase 47 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 75.636 70.696 2 0.015361 88669 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.463 36.655 244250000 0 244250000 0 0 0 0 0 0 0 0 0 0 0 0 0 47504 3903 42612 398183;398184 314266;314267 314266 2 SLLDANFEPGKK Unmodified 1317.6929 0.69286595 3903 Q96K76 USP47 Ubiquitin carboxyl-terminal hydrolase 47 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 60.694 59.628 3 0.0063299 81968 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.799 46.836 47695000 19526000 0 0 0 2755800 3752800 0 0 0 6037700 4558100 0 0 4129100 6935700 47505 3903 42613 398185;398186;398187;398188;398189;398190;398191 314268;314269;314270 314270 1 SLLDASEEAIK Unmodified 1174.6081 0.60813326 1073 P18206 VCL Vinculin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 66.078 64.738 2 0.0014754 81239 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.496 53.2 3006400000 87526000 2479600000 35095000 18853000 9013200 40690000 14131000 15537000 11328000 31152000 41942000 44423000 16591000 40788000 119790000 47506 1073 42614 398192;398193;398194;398195;398196;398197;398198;398199;398200;398201;398202;398203;398204;398205;398206;398207 314271;314272;314273;314274;314275;314276;314277;314278;314279;314280;314281;314282;314283;314284;314285;314286 314275 11 SLLDASEEAIKK Unmodified 1302.7031 0.70309628 1073 P18206 VCL Vinculin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 58.418 56.99 3 0.00099303 63534 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 51.875 30.645 387520000 11640000 158800000 27067000 16953000 7869100 11217000 14894000 0 4884300 14493000 24367000 26851000 15866000 13387000 39232000 47507 1073 42615 398208;398209;398210;398211;398212;398213;398214;398215;398216;398217;398218;398219;398220;398221;398222 314287;314288;314289;314290;314291;314292;314293;314294;314295;314296;314297;314298;314299;314300;314301;314302 314297 14 SLLDFLPR Unmodified 959.54402 0.54401687 1729 P53992 SEC24C Protein transport protein Sec24C yes yes 0 0 0 By MS/MS 10 0 1 1 91.076 91.214 2 0.02755 105556 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.281 31.544 2899900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2899900 47508 1729 42616 398223 314303 314303 1 SLLDGEGPQAVGGQDVAFSR Unmodified 2001.9756 0.97558275 10 A1X283 SH3PXD2B SH3 and PX domain-containing protein 2B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 77.496 77.601 2 7.2684E-47 89683 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 150.19 133.41 136160000 0 0 0 0 9414400 9039300 8481000 12085000 11669000 16429000 13341000 18100000 10455000 9969300 17177000 47509 10 42617 398224;398225;398226;398227;398228;398229;398230;398231;398232;398233;398234 314304;314305;314306;314307;314308;314309;314310;314311;314312;314313;314314 314306 11 SLLDGNIDSSQYEDSLR Unmodified 1910.8858 0.88576469 3994 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 77.451 77.621 2 4.1644E-38 88830 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 169.62 152.68 44972000 0 0 0 0 0 0 3433900 6312300 0 0 8247400 0 6858400 5360400 14760000 47510 3994 42618 398235;398236;398237;398238;398239;398240;398241 314315;314316;314317;314318;314319;314320;314321 314319 7 SLLDIISDPDAGTPEDK Unmodified 1784.868 0.86798936 3564 Q8WVM8 SCFD1 Sec1 family domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 87.469 85.847 2 2.8254E-57 107183 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 155.02 137.65 119050000 23445000 70226000 3729500 0 0 2568700 0 0 0 2674300 2126900 4313700 1508800 2432400 6023500 47511 3564 42619 398242;398243;398244;398245;398246;398247;398248;398249;398250;398251;398252;398253;398254;398255 314322;314323;314324;314325;314326;314327;314328;314329;314330;314331;314332;314333;314334;314335;314336;314337;314338 314331 17 SLLDILTDPSK Unmodified 1200.6602 0.66016884 3971 Q96RN5 MED15 Mediator of RNA polymerase II transcription subunit 15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 90.285 89.168 2 3.6145E-09 110972 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 137.95 109.01 199660000 21483000 63848000 2646100 3341600 5362500 8706300 5858800 9886400 8294000 13156000 9439300 9570800 7590600 8969100 21511000 47512 3971 42620 398256;398257;398258;398259;398260;398261;398262;398263;398264;398265;398266;398267;398268;398269;398270;398271 314339;314340;314341;314342;314343;314344;314345;314346;314347;314348;314349;314350;314351;314352;314353;314354;314355;314356 314342 18 SLLDLQGMSLR Oxidation (M) 1247.6544 0.65437195 5385 yes yes 0 1 0 By MS/MS 10 0 2 2 80.358 80.456 2 0.0032912 93044 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 60.118 31.017 + 39427000 0 0 0 0 0 0 0 0 0 39427000 0 0 0 0 0 47513 5385 42621 398272;398273 314357;314358 314357 6761 1 SLLDQLK Unmodified 815.47527 0.4752686 2465 Q14CX7 NAA25 N-alpha-acetyltransferase 25, NatB auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 65.559 64.12 2 0.020877 82011 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 111.28 16.871 1389600000 15049000 91824000 6175300 0 0 7044300 339480000 448210000 392330000 24625000 23350000 35107000 0 0 6447800 47514 2465 42622 398274;398275;398276;398277;398278;398279;398280;398281;398282;398283;398284 314359;314360;314361 314360 3 SLLDSVK Unmodified 760.43307 0.43306943 2114 Q05397 PTK2 Focal adhesion kinase 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 46.502 46.83 2 0.039725 53222 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 68.915 0 69061000 0 0 0 0 0 5764200 6760700 5590800 0 10960000 9212100 8861300 0 6999400 14913000 47515 2114 42623 398285;398286;398287;398288;398289;398290;398291;398292 314362 314362 1 SLLEAQK Unmodified 787.44397 0.44396847 4656 Q9NUY8 TBC1D23 TBC1 domain family member 23 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.053 24.258 2 0.024216 26133 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 95.793 24.497 231420000 0 0 0 11106000 11550000 14536000 18763000 11982000 11544000 22559000 27499000 25348000 28258000 19749000 28527000 47516 4656 42624 398293;398294;398295;398296;398297;398298;398299;398300;398301;398302;398303;398304 314363;314364;314365 314365 3 SLLEGEGSSGGGGR Unmodified 1261.5899 0.58985744 72 CON__P13645;P13645 KRT10 Keratin, type I cytoskeletal 10 yes no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.56 1.82 3 52 1 1 1 8 5 6 6 4 3 5 3 2 4 4 2 30.169 30.287 2 7.4973E-20 30439 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 140.07 119.17 + 42683000000 747580 396260 278270 8355500000 2344700000 3057000000 1722700000 5086500000 1659100000 3572700000 3120500000 5174500000 5111100000 1931100000 1546700000 47517 72 42625 398305;398306;398307;398308;398309;398310;398311;398312;398313;398314;398315;398316;398317;398318;398319;398320;398321;398322;398323;398324;398325;398326;398327;398328;398329;398330;398331;398332;398333;398334;398335;398336;398337;398338;398339;398340;398341;398342;398343;398344;398345;398346;398347;398348;398349;398350;398351;398352;398353;398354;398355;398356;398357;398358;398359 314366;314367;314368;314369;314370;314371;314372;314373;314374;314375;314376;314377;314378;314379;314380;314381;314382;314383;314384;314385;314386;314387;314388;314389;314390;314391;314392;314393;314394;314395;314396;314397;314398;314399;314400;314401;314402;314403;314404;314405;314406;314407;314408 314404 40 SLLEGQDAK Unmodified 959.49238 0.49237523 73;981;76 CON__P13646-1;CON__P19012;P19012;P13646 KRT15;KRT13 Keratin, type I cytoskeletal 15;Keratin, type I cytoskeletal 13 no no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 25.087 25.315 2 0.0089221 26422 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 68.224 10.943 + 612270000 0 0 0 0 10120000 0 177890000 255980000 0 5162700 11170000 52623000 92847000 6474500 0 47518 73;76;981 42626 398360;398361;398362;398363;398364;398365;398366;398367 314409;314410;314411;314412 314411 3 SLLEIQQEEAR Unmodified 1314.6779 0.67794416 2994 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 57.936 58.054 2 0.0097599 66205 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 60.102 30.629 436750000 0 0 0 23905000 29368000 29977000 33763000 23696000 32075000 40678000 44774000 52932000 42137000 33514000 49935000 47519 2994 42627 398368;398369;398370;398371;398372;398373;398374;398375;398376;398377;398378;398379 314413 314413 1 SLLEIQQEEARQMQK Oxidation (M) 1845.9255 0.92546143 2994 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes yes 0 1 1 By matching By MS/MS 2 0 2 1 1 57.536 51.485 3 0.00020602 64213 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 74.789 57.364 14190000 5126800 0 9063600 0 0 0 0 0 0 0 0 0 0 0 0 47520 2994 42628 398380;398381 314414 314414 4612 1 SLLEIQQEEARQMQK Unmodified 1829.9305 0.93054681 2994 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes yes 0 0 1 By MS/MS 2 0 1 1 66.144 62.392 3 0.0027366 77262 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 55.213 31.023 5075600 0 0 5075600 0 0 0 0 0 0 0 0 0 0 0 0 47521 2994 42628 398382 314415 314415 1 SLLELAR Unmodified 800.4756 0.47560295 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.2 3.82 3 2 5 2 2 1 1 1 1 1 1 65.124 62.543 2 0.017492 84764 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 151.17 70.796 1074800000 365840000 105140000 65938000 0 0 0 0 0 0 0 112770000 96928000 48717000 85090000 194370000 47522 1564 42629 398383;398384;398385;398386;398387;398388;398389;398390;398391;398392 314416;314417;314418;314419;314420;314421 314418 4 SLLELHK Unmodified 838.49125 0.49125301 1710 P53350 PLK1 Serine/threonine-protein kinase PLK1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 40.461 40.59 2 0.034226 45274 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 71.378 16.613 29976000 0 0 0 0 1650200 3728700 3391200 3882200 0 4760800 4881200 0 4024700 3657600 0 47523 1710 42630 398393;398394;398395;398396;398397;398398;398399;398400 314422 314422 1 SLLEMEK Unmodified 848.43135 0.43135487 232 O14974 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 45.374 45.51 2 0.050331 49927 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 62.717 18.025 36429000 0 0 0 0 4689600 0 0 0 0 11593000 8462800 0 6470200 5213500 0 47524 232 42631 398401;398402;398403;398404;398405 314423 314423 1 SLLENQSLSSSCESLK Unmodified 1780.8513 0.85129344 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching 10 0 5 1 1 1 1 1 62.518 62.497 2 2.1776E-06 71734 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 103.88 85.613 18576000 0 0 0 1744300 2213100 0 0 0 0 0 4060400 0 5124400 0 5433800 47525 2446 42632 398406;398407;398408;398409;398410 314424;314425;314426 314424 2 SLLESTYQR Unmodified 1095.556 0.55603812 3994 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 43.379 43.592 2 0.0036184 49319 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 109.86 92.477 176400000 0 0 0 0 10409000 18348000 13574000 16998000 13188000 15921000 0 33144000 25859000 0 28957000 47526 3994 42633 398411;398412;398413;398414;398415;398416;398417;398418;398419;398420 314427;314428;314429;314430;314431;314432;314433;314434 314434 7 SLLESTYQRK Unmodified 1223.651 0.65100113 3994 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 2 2 2 2 2 1 2 2 2 34.069 34.284 2;3 0.0032816 37194 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 52.167 31.705 216170000 0 0 0 0 12319000 14025000 17978000 17272000 20104000 19738000 29305000 16370000 19890000 19923000 29243000 47527 3994 42634 398421;398422;398423;398424;398425;398426;398427;398428;398429;398430;398431;398432;398433;398434;398435;398436;398437;398438;398439;398440;398441 314435;314436;314437;314438;314439;314440;314441 314437 6 SLLETQYQNVR Unmodified 1349.6939 0.69392858 3703 Q93015 NAT6 N-acetyltransferase 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 1 1 3 2 2 2 1 2 1 1 1 54.322 54.485 2;3 5.3541E-08 61221 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 149.94 102.74 1531000000 0 0 0 10604000 22083000 19935000 380350000 342710000 467770000 71001000 83500000 112530000 5969900 6330100 8260300 47528 3703 42635 398442;398443;398444;398445;398446;398447;398448;398449;398450;398451;398452;398453;398454;398455;398456;398457;398458;398459 314442;314443;314444;314445;314446;314447;314448;314449;314450;314451;314452;314453;314454;314455;314456 314449 13 SLLEVVVLSR Unmodified 1113.6758 0.67575932 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 86.258 86.386 2 0.0067887 99260 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 64.04 16.843 9879400 0 0 0 0 0 1344600 0 0 1644100 0 0 2653800 0 1483900 2753000 47529 19 42636 398460;398461;398462;398463;398464 314457 314457 1 SLLGDSAPTLHLNK Unmodified 1464.7936 0.79364262 1691 P52594 AGFG1 Arf-GAP domain and FG repeat-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 3 21 2 1 2 2 2 2 1 2 2 2 2 2 2 70.283 69.603 2;3 0.0011964 79028 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 54.09 46.179 417950000 150520000 0 11027000 0 6280200 18451000 14058000 15467000 2534200 21713000 22026000 27991000 20135000 38667000 69073000 47530 1691 42637 398465;398466;398467;398468;398469;398470;398471;398472;398473;398474;398475;398476;398477;398478;398479;398480;398481;398482;398483;398484;398485;398486;398487;398488 314458;314459;314460;314461;314462;314463;314464;314465;314466;314467;314468;314469;314470;314471 314469 7 SLLGEVEQNLQAAK Unmodified 1498.7991 0.79912193 399 O60437 PPL Periplakin yes yes 0 0 0 By MS/MS 1.5 0.5 1 1 2 85.811 84.377 2 0.00082161 109750 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.767 69.381 6221300 6221300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47531 399 42638 398489;398490 314472 314472 1 SLLGGNIR Unmodified 828.48175 0.48175096 670 O95573 ACSL3 Long-chain-fatty-acid--CoA ligase 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 45.958 46.066 2 0.017143 51785 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 66.138 20.122 70552000 0 0 0 0 0 17659000 16408000 19251000 17233000 0 0 0 0 0 0 47532 670 42639 398491;398492;398493;398494 314473;314474;314475;314476 314474 4 SLLGLDSGELQSGPESSSSPGVHVR Unmodified 2494.23 0.22995953 1602 P49815 TSC2 Tuberin yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 76.493 76.585 3 1.7959E-19 88419 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 56.72 51.72 53580000 0 0 0 0 1412800 4824900 0 4299500 7640600 6459700 0 7272900 3199500 5557000 12913000 47533 1602 42640 398495;398496;398497;398498;398499;398500;398501;398502;398503;398504 314477;314478;314479;314480;314481;314482;314483;314484;314485;314486 314478 10 SLLGQNVSTK Unmodified 1045.5768 0.57677356 3951 Q96Q05 TRAPPC9 Trafficking protein particle complex subunit 9 yes yes 0 0 0 By MS/MS 3 0 1 1 42.843 38.069 2 0.019167 47381 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 65.305 36.144 5979200 0 5979200 0 0 0 0 0 0 0 0 0 0 0 0 0 47534 3951 42641 398505 314487 314487 1 SLLIGVFK Unmodified 875.54804 0.54803961 4814;4517;2670;3497 Q9P2D1;Q9HCK8;Q8TD26;Q3L8U1 CHD7;CHD8;CHD6;CHD9 Chromodomain-helicase-DNA-binding protein 7;Chromodomain-helicase-DNA-binding protein 8;Chromodomain-helicase-DNA-binding protein 6;Chromodomain-helicase-DNA-binding protein 9 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 81.945 82.035 2 0.013529 94008 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 72.138 44.032 203220000 0 0 0 8191600 0 19821000 14648000 17703000 17343000 19012000 17317000 26904000 13838000 16240000 32206000 47535 4814;4517;3497;2670 42642 398506;398507;398508;398509;398510;398511;398512;398513;398514;398515;398516 314488;314489;314490;314491;314492;314493;314494;314495;314496 314493 9 SLLIPYLDNLVK Unmodified 1386.8123 0.8122528 149 O00410 IPO5 Importin-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.25 3.34 2 1 1 1 2 1 98.544 94.534 2 0.0021888 117791 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 100.48 81.162 101140000 38219000 58561000 0 0 0 0 0 0 0 0 0 0 0 0 4363700 47536 149 42643 398517;398518;398519;398520 314497;314498;314499;314500 314500 4 SLLIQELSK Unmodified 1029.607 0.60701105 4150 Q9BTT4 MED10 Mediator of RNA polymerase II transcription subunit 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 75.299 74.164 2 0.0060063 84523 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.221 44.992 275620000 108890000 32772000 28697000 4305500 6480500 7034100 7205100 6603200 5401300 9768400 11333000 11570000 8636000 8640600 18282000 47537 4150 42644 398521;398522;398523;398524;398525;398526;398527;398528;398529;398530;398531;398532;398533;398534;398535;398536 314501;314502;314503;314504;314505;314506;314507;314508;314509;314510;314511;314512;314513 314504 12 SLLLIQSR Unmodified 928.57057 0.57056597 4017 Q99504 EYA3 Eyes absent homolog 3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 65.502 65.583 2 0.049549 74265 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 47.082 5.4294 32914000 0 0 0 1532000 1469300 3078000 1937400 3193100 1970400 4601700 4238300 3640500 0 3354600 3898500 47538 4017 42645 398537;398538;398539;398540;398541;398542;398543;398544;398545;398546;398547 314514 314514 1 SLLLLGNER Unmodified 1013.5869 0.58694431 2278 Q13395 TARBP1 Probable methyltransferase TARBP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 70.926 70.994 2 0.015842 81517 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 57.047 12.653 34988000 0 0 0 0 3267100 5802700 0 2862100 0 5346500 0 7411400 5432200 4866300 0 47539 2278 42646 398548;398549;398550;398551;398552;398553;398554 314515;314516;314517;314518;314519;314520 314516 6 SLLLTVSQYK Unmodified 1150.6598 0.6597749 3489 Q8TCG1 KIAA1524 Protein CIP2A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 1 1 1 1 1 1 1 1 1 1 1 1 1 74.97 74.18 2 0.0030867 95711 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.033 77.408 84707000 33088000 3157600 0 0 1971400 6478700 2914900 3762000 3431700 5358700 3833000 4730100 2975300 4705700 8300300 47540 3489 42647 398555;398556;398557;398558;398559;398560;398561;398562;398563;398564;398565;398566;398567 314521;314522;314523;314524;314525;314526;314527;314528;314529;314530;314531;314532 314527 12 SLLLVPNGALK Unmodified 1123.6965 0.69649476 3176 Q86VX2 COMMD7 COMM domain-containing protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80.955 79.977 2 0.00051722 100642 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.442 75.591 166580000 77006000 49136000 6474000 1080900 1185200 3397500 2339700 2412700 1223900 3375700 2694000 3099300 2063000 2862800 8226700 47541 3176 42648 398568;398569;398570;398571;398572;398573;398574;398575;398576;398577;398578;398579;398580;398581;398582 314533;314534;314535;314536;314537;314538;314539;314540;314541;314542;314543 314536 11 SLLMISENVK Acetyl (Protein N-term) 1174.6268 0.62676022 501 O75449 KATNA1 Katanin p60 ATPase-containing subunit A1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 91.029 90.181 2 2.7439E-05 110091 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 132.76 108.6 97443000 0 91945000 0 0 0 0 0 643490 0 1671000 1317000 0 0 0 1866800 47542 501 42649 398583;398584;398585;398586;398587 314544;314545;314546;314547 314545 4 SLLMISENVK Acetyl (Protein N-term);Oxidation (M) 1190.6217 0.62167484 501 O75449 KATNA1 Katanin p60 ATPase-containing subunit A1 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 84.295 84.404 2 0.0016726 97970 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 51.949 24.646 9285800 0 0 0 0 0 0 0 0 0 0 0 6528700 2757100 0 0 47543 501 42649 398588;398589;398590 314548;314549;314550 314550 652 3 SLLNDVQFGQFGDDPK Unmodified 1778.8475 0.84752869 555 O75909 CCNK Cyclin-K yes yes 0 0 0 By MS/MS 10 0 1 1 84.885 85.064 2 0.035322 98139 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.266 33.42 5890900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5890900 47544 555 42650 398591 314551 314551 1 SLLNEIESIYDERQEQATEENAGVPVGPHLSLAYEDK Unmodified 4142.992 0.99202726 3994 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a yes yes 0 0 1 By MS/MS 2 0 1 1 98.09 89.959 4 3.135E-134 116100 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 139.96 132.53 75581000 75581000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47545 3994 42651 398592 314552 314552 1 SLLNKPK Acetyl (Protein N-term) 840.5069 0.50690308 1894 P62316 SNRPD2 Small nuclear ribonucleoprotein Sm D2 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 33.343 32.483 2 0.0090495 36095 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 118.06 37.679 1855700000 39313000 224000000 0 101200000 109200000 30723000 150040000 97056000 48232000 115570000 190460000 277030000 123070000 112780000 237040000 47546 1894 42652 398593;398594;398595;398596;398597;398598;398599;398600;398601;398602;398603;398604;398605;398606;398607;398608 314553;314554;314555;314556;314557;314558;314559;314560;314561;314562;314563;314564;314565 314564 4 SLLNLLSSQEEDFNSK Unmodified 1822.8949 0.89487281 4669 Q9NVI1 FANCI Fanconi anemia group I protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 88.816 88.957 2 0.00024537 102902 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.815 61.115 10464000 0 0 0 0 0 0 0 0 0 3140700 1664900 0 0 1239000 4419700 47547 4669 42653 398609;398610;398611;398612 314566;314567;314568 314567 3 SLLNPQDTPVK Unmodified 1210.6558 0.65575216 2818 Q5VUA4 ZNF318 Zinc finger protein 318 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 56.123 56.239 2 0.012924 63812 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 57.785 15.909 60405000 0 0 0 3994000 3895700 5124800 6907100 5434200 3744000 6929000 5680000 7532600 0 3985900 7178100 47548 2818 42654 398613;398614;398615;398616;398617;398618;398619;398620;398621;398622;398623 314569;314570;314571;314572;314573 314571 3 SLLNQCIEER Unmodified 1260.6132 0.61323542 3857 Q96GM8 TOE1 Target of EGR1 protein 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 52.248 52.691 2 0.011715 58961 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 53.751 37.211 12423000 0 0 0 0 0 0 0 0 0 0 0 0 0 3906100 8516400 47549 3857 42655 398624;398625 314574 314574 1 SLLNQCIEERYK Unmodified 1551.7715 0.77152697 3857 Q96GM8 TOE1 Target of EGR1 protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 66.462 58.168 3 0.0020835 77946 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.088 47.401 33813000 33813000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47550 3857 42656 398626 314575 314575 1 SLLPDFLQTPK Unmodified 1257.6969 0.69688869 1732 P54132 BLM Bloom syndrome protein yes yes 0 0 0 By MS/MS 2 0 1 1 94.319 86.188 2 0.015433 111574 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.985 62.474 4332800 4332800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47551 1732 42657 398627 314576 314576 1 SLLPLSTSLDHR Unmodified 1337.7303 0.73031409 3518 Q8TEQ6 GEMIN5 Gem-associated protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 73.244 73.46 3 0.001094 83948 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.563 57.838 74801000 0 0 0 0 0 0 0 0 12323000 12866000 0 18648000 0 15736000 15228000 47552 3518 42658 398628;398629;398630;398631;398632;398633 314577;314578;314579;314580;314581;314582;314583 314579 7 SLLPNYTMEGERPEEGVAGGLNR Oxidation (M) 2504.1966 0.19655092 4089 Q9BQ70 TCF25 Transcription factor 25 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 71.624 71.738 3 1.7749E-09 82150 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 64.203 60.471 80887000 0 0 0 0 7349500 0 0 10521000 15750000 0 15546000 0 0 0 31720000 47553 4089 42659 398634;398635;398636;398637;398638 314584;314585;314586;314587;314588 314585 5593 5 SLLQALNEVK Unmodified 1113.6394 0.63937381 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80.017 79.039 2 0.00016695 101585 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 119.75 81.613 1631900000 780880000 329880000 53479000 11821000 18103000 42321000 27578000 39416000 28457000 54975000 40619000 47379000 39522000 44353000 73161000 47554 2392 42660 398639;398640;398641;398642;398643;398644;398645;398646;398647;398648;398649;398650;398651;398652;398653 314589;314590;314591;314592;314593;314594;314595;314596;314597;314598;314599;314600;314601;314602;314603;314604;314605 314596 16 SLLQQLENVTK Unmodified 1271.7085 0.70851601 5052 Q9UPN9 TRIM33 E3 ubiquitin-protein ligase TRIM33 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 6.12 3.89 3 1 4 1 2 1 1 1 1 1 86.587 84.323 2 0.00029757 97199 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 90.108 51.815 268050000 155080000 76169000 4705500 0 0 0 0 0 5067000 9957500 0 0 3157300 0 13916000 47555 5052 42661 398654;398655;398656;398657;398658;398659;398660;398661 314606;314607;314608;314609;314610;314611;314612 314606 7 SLLQTTFLVDNK Unmodified 1377.7504 0.75038083 2831 Q5VZE5 NAA35 N-alpha-acetyltransferase 35, NatC auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 81.867 81.91 2 0.00029933 94730 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 97.456 50.259 46598000 0 0 0 0 1604400 2750200 0 0 0 12261000 11878000 18104000 0 0 0 47556 2831 42662 398662;398663;398664;398665;398666 314613;314614;314615 314613 3 SLLQTTFLVDNKK Unmodified 1505.8453 0.84534384 2831 Q5VZE5 NAA35 N-alpha-acetyltransferase 35, NatC auxiliary subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 2 2 2 2 74.885 74.971 2;3 3.9847E-08 86557 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 119.03 97.94 328570000 0 0 0 0 11085000 22344000 0 0 0 93484000 77135000 124520000 0 0 0 47557 2831 42663 398667;398668;398669;398670;398671;398672;398673;398674;398675 314616;314617;314618;314619;314620;314621;314622 314621 5 SLLSAEEAAK Unmodified 1017.5342 0.53424004 3039 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 8.18 3.29 3 1 13 1 3 1 1 1 1 1 1 1 1 1 1 2 1 41.952 40.73 1;2 0.0027412 52252 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.25 71.068 2550200000 34685000 2035400000 0 19244000 18166000 48945000 23629000 19943000 16587000 42617000 49382000 47717000 29833000 73404000 90655000 47558 3039 42664 398676;398677;398678;398679;398680;398681;398682;398683;398684;398685;398686;398687;398688;398689;398690;398691;398692 314623;314624;314625;314626;314627;314628;314629;314630;314631;314632;314633;314634;314635 314626 8 SLLSGNHIAYDYHPPADK Unmodified 1996.9643 0.96428978 2486 Q15047 SETDB1 Histone-lysine N-methyltransferase SETDB1 yes yes 0 0 0 By MS/MS 2 0 1 1 72.356 64.118 4 0.008863 85102 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 35.492 29.949 26511000 26511000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47559 2486 42665 398693 314636 314636 0 SLLSILQR Unmodified 928.57057 0.57056597 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS 10 0 1 1 82.647 82.747 2 0.013935 95727 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 71.296 4.4965 3909800 0 0 0 0 0 0 0 0 0 3909800 0 0 0 0 0 47560 3119 42666 398694 314637 314637 1 SLLSLPEK Unmodified 885.51713 0.51713341 3255 Q8IX12 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65.249 64.145 2 0.020634 80014 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 130.22 65.418 1633900000 162460000 525020000 40782000 34631000 43970000 53185000 71423000 73095000 56252000 96125000 79593000 89068000 80626000 79516000 148200000 47561 3255 42667 398695;398696;398697;398698;398699;398700;398701;398702;398703;398704;398705;398706;398707;398708;398709 314638;314639;314640;314641;314642;314643;314644;314645;314646;314647;314648;314649 314646 5 SLLSNDLK Unmodified 888.49165 0.49164694 2627 Q16666;Q6K0P9 IFI16;PYHIN1 Gamma-interferon-inducible protein 16;Pyrin and HIN domain-containing protein 1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 47.399 47.608 2 0.039356 52998 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 50.703 9.4011 106540000 0 0 0 9480400 0 12211000 10148000 8599100 9903100 0 0 10537000 13083000 11374000 21203000 47562 2627 42668 398710;398711;398712;398713;398714;398715;398716;398717;398718 314650 314650 1 SLLSNLDEVK Unmodified 1116.6027 0.60265396 3549 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 75.045 73.909 2 6.1996E-06 89657 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 128.36 78.943 315600000 26155000 37396000 64737000 6217000 5613000 30436000 9813200 8646100 9610900 24821000 14763000 15984000 13757000 20619000 27036000 47563 3549 42669 398719;398720;398721;398722;398723;398724;398725;398726;398727;398728;398729;398730;398731;398732;398733;398734 314651;314652;314653;314654;314655;314656;314657;314658;314659;314660;314661;314662;314663;314664 314656 14 SLLSNLDEVKK Unmodified 1244.6976 0.69761697 3549 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS 8 3.46 3 9 2 1 1 1 1 1 1 1 1 1 1 64.634 62.875 2;3 0.0015564 86822 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.813 77.083 192210000 107580000 26224000 0 5861100 0 5831100 0 6496900 2818800 7514400 7728800 11205000 5558200 5396900 0 47564 3549 42670 398735;398736;398737;398738;398739;398740;398741;398742;398743;398744;398745;398746 314665;314666;314667;314668 314667 3 SLLSQEK Unmodified 803.43888 0.43888309 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.127 22.332 2 0.023899 23088 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 94.262 8.9969 354540000 0 0 0 17017000 18185000 20137000 19806000 27717000 22892000 32288000 38516000 45437000 46887000 32290000 33365000 47565 2556 42671 398747;398748;398749;398750;398751;398752;398753;398754;398755;398756;398757;398758 314669;314670;314671;314672;314673 314670 5 SLLSSASATVGHGLTAVK Unmodified 1697.9312 0.93119874 3239 Q8IWE2 FAM114A1 Protein NOXP20 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 78.502 77.45 3 2.4785E-05 88181 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.152 56.782 75896000 0 20425000 0 0 0 0 0 0 0 18961000 0 0 0 13577000 22933000 47566 3239 42672 398759;398760;398761;398762;398763;398764 314674;314675;314676;314677;314678;314679;314680 314676 7 SLLSSTSTTTK Unmodified 1124.5925 0.5924832 232 O14974 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 30.541 30.933 2 0.0050182 33511 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 60.064 7.2783 65592000 0 0 0 0 0 0 0 0 9238400 0 13524000 0 11563000 12855000 18413000 47567 232 42673 398765;398766;398767;398768;398769 314681;314682;314683;314684;314685 314685 4 SLLTSRPEDTTHNRR Unmodified 1781.9133 0.91325726 5260 Q9Y613 FHOD1 FH1/FH2 domain-containing protein 1 yes yes 0 0 2 By MS/MS By matching By matching By MS/MS By matching 10 0 5 1 1 1 1 1 22.289 22.72 4 0.01625 22769 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 34.432 8.8421 53061000 0 0 0 0 0 0 0 6158000 0 0 0 4028300 8473000 10422000 23980000 47568 5260 42674 398770;398771;398772;398773;398774 314686 314686 1 SLLVIPNTLAVNAAQDSTDLVAK Unmodified 2352.29 0.2900406 1067 P17987 TCP1 T-complex protein 1 subunit alpha yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 2 2 2 2 2 2 2 93.267 93.343 2;3 2.4136E-08 108434 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 77.754 71.591 82350000 0 0 0 1399400 1469600 0 0 1889900 0 22631000 14842000 5858400 0 3671700 30588000 47569 1067 42675 398775;398776;398777;398778;398779;398780;398781;398782;398783;398784;398785;398786;398787;398788;398789 314687;314688;314689;314690;314691;314692;314693 314687 7 SLLVNPEGPTLMR Oxidation (M) 1441.7599 0.75989966 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 70.886 70.949 2 0.0007845 81320 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 64.439 58.118 1452200000 0 0 0 63441000 56557000 213340000 102520000 65160000 59593000 157870000 184590000 193380000 106430000 0 249340000 47570 1565 42676 398790;398791;398792;398793;398794;398795;398796;398797;398798;398799;398800 314694;314695;314696;314697;314698;314699;314700;314701;314702;314703;314704;314705;314706;314707 314702 2503 14 SLLVNPEGPTLMR Unmodified 1425.765 0.76498503 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.639 78.697 2 1.0079E-06 90347 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 104.82 83.127 766960000 0 0 0 26656000 20218000 70484000 24615000 43581000 25145000 73815000 72326000 66558000 39515000 81283000 222770000 47571 1565 42676 398801;398802;398803;398804;398805;398806;398807;398808;398809;398810;398811;398812 314708;314709;314710;314711;314712;314713;314714;314715;314716;314717;314718;314719;314720 314711 13 SLLVQTK Unmodified 787.48035 0.48035398 1402 P39023 RPL3 60S ribosomal protein L3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32.223 31.394 2 0.020864 34092 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 107.67 41.536 1341300000 379140000 342610000 19982000 35458000 39102000 38329000 36196000 34659000 30924000 51061000 53446000 82171000 69332000 53311000 75575000 47572 1402 42677 398813;398814;398815;398816;398817;398818;398819;398820;398821;398822;398823;398824;398825;398826;398827 314721;314722;314723;314724;314725;314726;314727;314728;314729;314730;314731;314732;314733;314734;314735 314729 15 SLLVTELGSSR Unmodified 1160.6401 0.6401021 1244 P29218 IMPA1 Inositol monophosphatase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 68.403 68.529 2 2.6569E-05 77886 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 150.53 126.58 100400000 0 0 0 4062100 0 6660300 0 3195900 0 4254000 17087000 16248000 3536300 9880400 35472000 47573 1244 42678 398828;398829;398830;398831;398832;398833;398834;398835;398836 314736;314737;314738;314739;314740;314741;314742;314743;314744;314745;314746;314747 314739 12 SLMASEEEYSTK Unmodified 1373.6021 0.60206161 90 CON__Q3SX28 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 41.891 40.646 2 3.1096E-14 52197 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 167.67 144.6 + 1148400000 7725100 953050000 6893200 0 6096900 4353900 8064700 10298000 4754500 8008200 28411000 23431000 11114000 20496000 55704000 47574 90 42679 398837;398838;398839;398840;398841;398842;398843;398844;398845;398846;398847;398848;398849;398850;398851 314748;314749;314750;314751;314752;314753;314754;314755;314756;314757;314758;314759;314760 314751 13 SLMASEEEYSTK Oxidation (M) 1389.597 0.59697623 90 CON__Q3SX28 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.87 3.88 6 2 7 1 6 1 1 1 1 1 1 1 1 31.141 29.123 2 6.8684E-15 37454 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145.99 128.55 + 582870000 10311000 521520000 2954200 0 1876100 0 0 4150900 2024800 3891000 11143000 9486700 0 0 15509000 47575 90 42679 398852;398853;398854;398855;398856;398857;398858;398859;398860;398861;398862;398863;398864;398865;398866 314761;314762;314763;314764;314765;314766;314767;314768;314769;314770 314763 123 10 SLMDHTIPEV Unmodified 1140.5485 0.5485099 168 O00560 SDCBP Syntenin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.771 74.836 2 0.0068811 86241 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 77.058 55.53 133330000 0 0 0 4976600 4891600 12140000 7741200 8388800 7691200 13705000 12817000 12294000 9527700 9340400 29817000 47576 168 42680 398867;398868;398869;398870;398871;398872;398873;398874;398875;398876;398877;398878 314771;314772;314773;314774;314775;314776;314777 314773 6 SLMDHTIPEV Oxidation (M) 1156.5434 0.54342452 168 O00560 SDCBP Syntenin-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.44 3.13 4 1 20 3 2 2 2 2 1 2 1 2 1 2 2 2 1 60.544 59.634 2 0.015937 67905 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 45.081 39.12 280170000 0 138110000 10744000 9469100 10917000 16897000 7604000 8301900 5140100 17885000 6393500 15637000 12941000 12659000 7480200 47577 168 42680 398879;398880;398881;398882;398883;398884;398885;398886;398887;398888;398889;398890;398891;398892;398893;398894;398895;398896;398897;398898;398899;398900;398901;398902;398903 314778;314779;314780;314781;314782;314783;314784 314783 235 7 SLMDQYFAR Oxidation (M) 1145.5175 0.51754412 1974 P78344 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 1 2 2 2 2 2 2 50.225 50.379 2 0.0026666 56211 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 98.299 83.764 567960000 0 0 0 39216000 31822000 42923000 44985000 50126000 17969000 59079000 59450000 71414000 53299000 44963000 52721000 47578 1974 42681 398904;398905;398906;398907;398908;398909;398910;398911;398912;398913;398914;398915;398916;398917;398918;398919;398920;398921;398922;398923;398924;398925;398926 314785;314786;314787;314788;314789;314790;314791;314792;314793;314794;314795;314796;314797;314798;314799;314800;314801;314802;314803;314804;314805;314806;314807;314808;314809;314810;314811;314812;314813 314800 3176 27 SLMDQYFAR Unmodified 1129.5226 0.5226295 1974 P78344 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.776 72.839 2 0.0037221 82833 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 89.142 73.261 488370000 0 0 0 19073000 36976000 39815000 23479000 56890000 26995000 35175000 41176000 46884000 32574000 35727000 93603000 47579 1974 42681 398927;398928;398929;398930;398931;398932;398933;398934;398935;398936;398937;398938 314814;314815 314814 2 SLMEGITMVCGGGK Unmodified 1438.6618 0.66184187 5352 yes yes 0 0 0 By MS/MS 10 0 1 1 51.385 52.09 2 0.0073494 58577 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 42.743 7.0911 + 5252900 0 0 0 0 0 0 0 0 0 0 0 5252900 0 0 0 47580 5352 42682 398939 314816 314816 1 SLMEQDVK Oxidation (M) 964.45355 0.45354688 3735 Q96AC1 FERMT2 Fermitin family homolog 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.557 14.72 2 0.012044 14250 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 64.567 13.935 126770000 0 0 0 7295300 5503000 18096000 11930000 5156700 6612100 15841000 15034000 9810800 11061000 11651000 8778100 47581 3735 42683 398940;398941;398942;398943;398944;398945;398946;398947;398948;398949;398950;398951 314817;314818;314819;314820;314821;314822 314817 5306 6 SLMFNLK Unmodified 851.45751 0.45751004 3631 Q92576 PHF3 PHD finger protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 69.016 69.077 2 0.046463 78619 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.897 0 69859000 0 0 0 3366600 2846800 6489800 5064900 5842000 4523100 8422700 0 9433100 4957700 6507200 12405000 47582 3631 42684 398952;398953;398954;398955;398956;398957;398958;398959;398960;398961;398962 314823;314824;314825 314823 3 SLMNNSK Unmodified 792.37999 0.379988 2828 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 10.042 6.5269 2 0.027336 9512 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.602 30.608 132290000 13686000 118600000 0 0 0 0 0 0 0 0 0 0 0 0 0 47583 2828 42685 398963;398964 314826 314826 1 SLMSADNVR Oxidation (M) 1007.4706 0.47059393 295 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 2 1 2 2 16.973 17.148 2 0.0087137 15384 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 60.118 43.342 105190000 0 0 0 4786500 4665100 8405100 8567200 7341400 4124300 8160000 11115000 17478000 5860800 9607000 15077000 47584 295 42686 398965;398966;398967;398968;398969;398970;398971;398972;398973;398974;398975;398976;398977;398978;398979;398980;398981;398982;398983;398984;398985;398986;398987 314827;314828;314829;314830;314831;314832;314833;314834 314831 378 7 SLMSLGNEAEEK Unmodified 1306.6075 0.60748134 297 O43149 ZZEF1 Zinc finger ZZ-type and EF-hand domain-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 59.182 53.339 2 1.6032E-24 68677 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 175.93 91.986 31488000 0 31488000 0 0 0 0 0 0 0 0 0 0 0 0 0 47585 297 42687 398988 314835 314835 1 SLNANTDITSLARK Unmodified 1502.8053 0.80526994 3671 Q92845 KIFAP3 Kinesin-associated protein 3 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 60.973 54.938 3 0.024172 68525 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 22.857 9.1774 23683000 20318000 0 3365200 0 0 0 0 0 0 0 0 0 0 0 0 47586 3671 42688 398989;398990 314836;314837 314837 2 SLNDLGLR Unmodified 886.48723 0.48723027 2708 Q53SF7 COBLL1 Cordon-bleu protein-like 1 yes yes 0 0 0 By matching By matching By matching By MS/MS By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 51.863 52.189 2 0.044838 57905 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.756 20.333 66865000 0 0 0 0 0 8939000 10527000 0 5668200 8991600 12472000 9451000 0 0 10817000 47587 2708 42689 398991;398992;398993;398994;398995;398996;398997 314838 314838 1 SLNDLIEER Unmodified 1087.551 0.55095274 3905 Q96KB5 PBK Lymphokine-activated killer T-cell-originated protein kinase yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.633 62.728 2 0.0047785 72324 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 85.731 37.169 282470000 0 0 0 18616000 13023000 31377000 20042000 15887000 10704000 29547000 27529000 27572000 21301000 26991000 39878000 47588 3905 42690 398998;398999;399000;399001;399002;399003;399004;399005;399006;399007;399008;399009 314839;314840;314841 314841 3 SLNDLIEERYK Unmodified 1378.7092 0.70924429 3905 Q96KB5 PBK Lymphokine-activated killer T-cell-originated protein kinase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 2 1 1 71.787 66.167 3 0.00031142 86931 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.452 82.821 504620000 356790000 133960000 13873000 0 0 0 0 0 0 0 0 0 0 0 0 47589 3905 42691 399010;399011;399012;399013 314842;314843;314844;314845 314844 3 SLNELGIK Unmodified 872.49673 0.49673232 457 O75128 COBL Protein cordon-bleu yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 48.781 48.768 2 0.03349 54675 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 53.679 14.717 89791000 0 0 0 9854000 8431500 13942000 10907000 10248000 9217600 11484000 15707000 0 0 0 0 47590 457 42692 399014;399015;399016;399017;399018;399019;399020;399021 314846 314846 1 SLNESKIEIER Unmodified 1316.6936 0.69359423 1029 P15924 DSP Desmoplakin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 39.488 39.565 3 0.0019741 43157 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 65.395 50.193 64436000 0 0 0 9766600 3077000 0 0 28388000 0 0 4998700 18205000 0 0 0 47591 1029 42693 399022;399023;399024;399025;399026 314847;314848;314849 314848 3 SLNFQEDDDTSRETFASDTNEALASLDESQEGHAEAK Unmodified 4056.7581 0.75806416 4442 Q9H814 PHAX Phosphorylated adapter RNA export protein yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 84.517 79.221 4 1.3282E-34 101171 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.868 73.304 29533000 20697000 0 8836500 0 0 0 0 0 0 0 0 0 0 0 0 47592 4442 42694 399027;399028 314850;314851 314850 2 SLNGAVPLGSNAR Unmodified 1254.668 0.66804818 4371 Q9H2P0 ADNP Activity-dependent neuroprotector homeobox protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 47.375 47.539 2 0.0023139 53588 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 64.82 48.682 47043000 0 0 0 2973400 1895500 3503400 3313300 3466600 0 5119500 6664700 7779300 3812700 3059100 5455700 47593 4371 42695 399029;399030;399031;399032;399033;399034;399035;399036;399037;399038;399039 314852;314853;314854;314855;314856;314857;314858;314859;314860 314854 9 SLNGAVPLGSNAREESSIHCK Unmodified 2225.0859 0.085878255 4371 Q9H2P0 ADNP Activity-dependent neuroprotector homeobox protein yes yes 0 0 1 By MS/MS 2 0 1 1 55.243 47.135 3 0.0046765 64582 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 36.111 27.11 8731600 8731600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47594 4371 42696 399040 314861 314861 1 SLNGTIENLK Unmodified 1087.5873 0.58733824 4264 Q9BZF9 UACA Uveal autoantigen with coiled-coil domains and ankyrin repeats yes yes 0 0 0 By MS/MS 2 0 1 1 56.466 50.644 2 0.013139 65441 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.358 41.583 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47595 4264 42697 399041 314862 314862 1 SLNILTAFQK Unmodified 1133.6445 0.64445919 1260 P30040 ERP29 Endoplasmic reticulum resident protein 29 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.37 3.17 3 1 15 1 2 1 1 1 1 1 1 1 1 1 1 2 2 2 78.483 77.613 2 0.0018552 98162 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 88.136 49.586 513390000 122410000 102990000 7087300 5717200 8694100 16500000 14416000 11627000 12094000 17110000 23591000 34323000 12249000 24927000 99645000 47596 1260 42698 399042;399043;399044;399045;399046;399047;399048;399049;399050;399051;399052;399053;399054;399055;399056;399057;399058;399059;399060 314863;314864;314865;314866;314867;314868;314869;314870;314871;314872;314873;314874;314875;314876;314877;314878;314879;314880 314863 18 SLNLEDYK Unmodified 980.48148 0.48147619 3618 Q92541 RTF1 RNA polymerase-associated protein RTF1 homolog yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS 10 0 5 1 1 1 1 1 49.755 49.851 2 0.027935 56593 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 57.047 19.489 37616000 0 0 0 0 5000200 7853900 7257200 0 6241100 0 0 0 0 0 11264000 47597 3618 42699 399061;399062;399063;399064;399065 314881;314882 314881 2 SLNLSTEFISSTK Unmodified 1425.7351 0.73512469 1383 P36952 SERPINB5 Serpin B5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.68 3.89 7 1 11 1 5 2 1 1 1 1 1 1 1 1 1 1 1 80.421 76.637 2;3 2.8325E-13 95268 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 155.24 117.69 3703100000 185270000 3427500000 84452000 5890400 0 0 0 0 0 0 0 0 0 0 0 47598 1383 42700 399066;399067;399068;399069;399070;399071;399072;399073;399074;399075;399076;399077;399078;399079;399080;399081;399082;399083;399084 314883;314884;314885;314886;314887;314888;314889;314890;314891;314892;314893;314894;314895;314896;314897;314898;314899;314900 314886 17 SLNLVDSPQPLLEK Unmodified 1551.8508 0.85082315 1493 P46019 PHKA2 Phosphorylase b kinase regulatory subunit alpha, liver isoform yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 80.29 79.636 2 0.00092198 98698 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.911 67.361 308470000 0 220140000 1858600 4530200 4328900 9514800 5558300 4202700 4322900 8924400 6839300 10921000 6230800 7041400 14060000 47599 1493 42701 399085;399086;399087;399088;399089;399090;399091;399092;399093;399094;399095;399096;399097;399098;399099 314901;314902;314903;314904;314905;314906;314907;314908 314902 8 SLNNFISQR Unmodified 1077.5567 0.55670682 5278 Q9Y6D9 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 53.03 53.173 2 0.0037853 60075 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 100.84 48.354 600460000 0 0 0 35910000 29563000 38057000 46537000 44434000 33941000 48614000 62517000 55617000 69545000 56530000 79191000 47600 5278 42702 399100;399101;399102;399103;399104;399105;399106;399107;399108;399109;399110;399111 314909;314910;314911;314912;314913;314914;314915;314916;314917 314915 9 SLNNQFASFIDK Unmodified 1382.683 0.68302954 780;50 CON__ENSEMBL:ENSBTAP00000038253;P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.56 1.82 6 1 117 2 3 2 22 6 4 8 26 9 13 5 8 11 3 2 86.266 86.126 2 2.6371E-17 100141 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 175.86 159.66 + 111580000000 2414300000 2520800000 399930000 19490000000 9887500 10482000000 9226400 315680000 18111000 18412000000 11571000000 17396000000 14991000000 7001600000 6548700000 47601 50;780 42703 399112;399113;399114;399115;399116;399117;399118;399119;399120;399121;399122;399123;399124;399125;399126;399127;399128;399129;399130;399131;399132;399133;399134;399135;399136;399137;399138;399139;399140;399141;399142;399143;399144;399145;399146;399147;399148;399149;399150;399151;399152;399153;399154;399155;399156;399157;399158;399159;399160;399161;399162;399163;399164;399165;399166;399167;399168;399169;399170;399171;399172;399173;399174;399175;399176;399177;399178;399179;399180;399181;399182;399183;399184;399185;399186;399187;399188;399189;399190;399191;399192;399193;399194;399195;399196;399197;399198;399199;399200;399201;399202;399203;399204;399205;399206;399207;399208;399209;399210;399211;399212;399213;399214;399215;399216;399217;399218;399219;399220;399221;399222;399223;399224;399225;399226;399227;399228;399229;399230;399231;399232;399233;399234;399235 314918;314919;314920;314921;314922;314923;314924;314925;314926;314927;314928;314929;314930;314931;314932;314933;314934;314935;314936;314937;314938;314939;314940;314941;314942;314943;314944;314945;314946;314947;314948;314949;314950;314951;314952;314953;314954;314955;314956;314957;314958;314959;314960;314961;314962;314963;314964;314965;314966;314967;314968;314969;314970;314971;314972;314973;314974;314975;314976;314977;314978;314979;314980;314981;314982;314983;314984;314985;314986;314987;314988;314989;314990;314991;314992;314993;314994;314995;314996;314997;314998;314999;315000;315001;315002;315003;315004;315005;315006;315007;315008;315009;315010;315011;315012;315013;315014;315015;315016;315017;315018;315019;315020;315021;315022;315023;315024;315025;315026;315027;315028;315029;315030;315031;315032;315033;315034;315035;315036;315037;315038;315039;315040 314945 118 SLNPDEMR Oxidation (M) 976.42839 0.42839476 1683 P52294 KPNA1 Importin subunit alpha-5;Importin subunit alpha-5, N-terminally processed yes yes 0 1 0 By matching By matching By matching By matching By MS/MS By matching By matching By matching 10 0 8 1 1 1 1 1 1 1 1 14.352 14.561 2 0.031728 13695 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 47.574 37.16 37871000 0 0 0 0 0 5532100 3478200 0 2536400 5047800 5190400 7115600 4351100 4619700 0 47602 1683 42704 399236;399237;399238;399239;399240;399241;399242;399243 315041 315041 1 SLNPPIFLK Acetyl (Protein N-term) 1069.6172 0.61718181 3344 Q8N5C7 DTWD1 DTW domain-containing protein 1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 90.995 90.356 2 0.0071619 110208 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.429 38.255 155050000 0 57091000 0 6342400 7797300 10775000 9213500 0 6845800 13631000 0 13668000 8437700 8008300 13242000 47603 3344 42705 399244;399245;399246;399247;399248;399249;399250;399251;399252;399253;399254;399255 315042;315043;315044;315045 315042 4 SLNQSLAEWK Unmodified 1174.5982 0.59823728 1744 P54709 ATP1B3 Sodium/potassium-transporting ATPase subunit beta-3 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 62.079 61.908 2 0.008406 70567 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 60.118 39.493 9085200 0 0 0 0 4220700 0 0 4864400 0 0 0 0 0 0 0 47604 1744 42706 399256;399257 315046;315047 315046 2 SLNSDISYFGVGGK Unmodified 1442.7042 0.70415892 28 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.866 75.928 2 0.00040798 87664 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 87.001 68.221 91822000 0 0 0 2069000 2933800 11679000 5728000 7730900 4129600 11038000 8258700 12321000 7445900 6017800 12470000 47605 28 42707 399258;399259;399260;399261;399262;399263;399264;399265;399266;399267;399268;399269 315048;315049;315050;315051;315052;315053;315054;315055;315056;315057;315058;315059 315049 12 SLNSFGGCLEGSR Unmodified 1382.6249 0.62486274 100 CON__Q7RTT2;CON__Q8N1N4-2;Q8N1N4 KRT78 Keratin, type II cytoskeletal 78 yes no 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 55.525 55.755 2 0.00010705 63461 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 84.821 67.59 + 40023000 0 0 0 0 0 4160400 3691100 4420900 2580600 5324400 4865900 4700700 6517200 3762100 0 47606 100 42708 399270;399271;399272;399273;399274;399275;399276;399277;399278 315060;315061;315062 315061 3 SLNSIEFR Unmodified 964.49779 0.49779495 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 53.521 53.597 2 0.0068592 59250 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.561 45.712 122830000 0 0 0 12305000 9398900 14149000 0 11640000 0 0 17351000 0 12427000 16679000 28881000 47607 1986 42709 399279;399280;399281;399282;399283;399284;399285;399286 315063;315064;315065;315066;315067 315065 5 SLNWEEMEK Unmodified 1164.5121 0.51212439 3727 Q969U7 PSMG2 Proteasome assembly chaperone 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 60.504 60.75 2 0.018779 69370 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 65.156 55.942 45404000 0 0 0 0 0 2456900 2026000 2540600 1468300 3199400 5919700 5018800 3484500 5095100 14195000 47608 3727 42710 399287;399288;399289;399290;399291;399292;399293;399294;399295;399296 315068;315069;315070;315071;315072 315068 5 SLNWEEMEK Oxidation (M) 1180.507 0.50703901 3727 Q969U7 PSMG2 Proteasome assembly chaperone 2 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 44.612 39.548 2 0.024658 51485 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.993 50.435 90618000 0 90618000 0 0 0 0 0 0 0 0 0 0 0 0 0 47609 3727 42710 399297;399298 315073;315074 315074 2 SLNYTGEK Unmodified 910.43961 0.43961137 4669 Q9NVI1 FANCI Fanconi anemia group I protein yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.655 19.856 2 0.0063373 20531 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 101.72 30.007 159610000 0 0 0 12307000 10578000 12996000 14353000 12389000 399580 12326000 14696000 19840000 15694000 15727000 18305000 47610 4669 42711 399299;399300;399301;399302;399303;399304;399305;399306;399307;399308;399309;399310 315075;315076;315077;315078;315079;315080;315081 315081 4 SLPAEEGSSGK Unmodified 1060.5037 0.50366819 4968 Q9UKJ3 GPATCH8 G patch domain-containing protein 8 yes yes 0 0 0 By matching By MS/MS By matching By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 14.31 14.41 2 0.026126 13446 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 40.386 23.839 15052000 0 0 0 0 1637700 2352100 2015800 0 1440000 0 0 0 0 2535400 5070900 47611 4968 42712 399311;399312;399313;399314;399315;399316 315082 315082 1 SLPAEEGSSGKK Unmodified 1188.5986 0.59863121 4968 Q9UKJ3 GPATCH8 G patch domain-containing protein 8 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 8.6445 8.7452 3 0.014766 7055 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 33.589 20.799 17343000 0 0 0 0 2555300 1097900 2508600 1415400 1216900 0 0 4832400 1461700 2254500 0 47612 4968 42713 399317;399318;399319;399320;399321;399322;399323;399324 315083;315084 315084 2 SLPAEINRMK Unmodified 1157.6227 0.62267789 4468 Q9H9A6 LRRC40 Leucine-rich repeat-containing protein 40 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 50.877 44.919 3 0.019807 61987 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.539 35.408 107380000 103100000 0 4277100 0 0 0 0 0 0 0 0 0 0 0 0 47613 4468 42714 399325;399326 315085 315085 1 SLPAGDALYLSFNPPQPSR Unmodified 2029.0269 0.026890038 3693 Q92974 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 87.223 87.325 2 0.00088412 101157 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 59.306 44.744 31533000 0 0 0 0 1384100 2301800 1749300 3599000 3380600 9734100 8234200 0 0 1149500 0 47614 3693 42715 399327;399328;399329;399330;399331;399332;399333;399334 315086;315087;315088 315086 3 SLPAPVAQRPDSPGGGLQAPGQK Unmodified 2227.1709 0.17092851 2744 Q5JVS0 HABP4 Intracellular hyaluronan-binding protein 4 yes yes 0 0 1 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 57.681 58.02 3 6.142E-07 65381 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.724 30.124 31861000 0 0 0 0 0 6437700 0 6150700 0 0 0 8199700 0 0 11073000 47615 2744 42716 399335;399336;399337;399338 315089 315089 1 SLPASLSFLVK Unmodified 1160.6805 0.68051035 2381 Q14160 SCRIB Protein scribble homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 88.07 88.21 2 0.0079706 102042 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.823 48.666 32682000 0 0 0 0 0 2474500 1244100 2406200 1972700 3963100 3824100 2420600 1423800 2781400 10171000 47616 2381 42717 399339;399340;399341;399342;399343;399344;399345;399346;399347;399348 315090;315091;315092 315091 3 SLPAVQSDER Unmodified 1100.5462 0.54620171 1583 P49643 PRIM2 DNA primase large subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.313 30.502 2 0.020528 33130 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 47.187 24.95 141570000 0 0 0 5558700 6231500 10577000 6384200 8302400 5483900 11644000 16204000 21000000 11368000 13486000 25331000 47617 1583 42718 399349;399350;399351;399352;399353;399354;399355;399356;399357;399358;399359;399360 315093;315094;315095;315096;315097;315098 315096 6 SLPCDICK Unmodified 991.44669 0.44668736 844 P07602 PSAP Prosaposin;Saposin-A;Saposin-B-Val;Saposin-B;Saposin-C;Saposin-D yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 40.605 34.759 2 0.018274 45487 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.942 74.278 103420000 7850600 95566000 0 0 0 0 0 0 0 0 0 0 0 0 0 47618 844 42719 399361;399362 315099 315099 1 SLPDCTPHPNSISIDAGPRQAPK Unmodified 2457.2071 0.20705602 5100 Q9Y2H0 DLGAP4 Disks large-associated protein 4 yes yes 0 0 1 By MS/MS 2 0 1 1 66.589 58.294 4 0.013554 78374 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 27.32 12.551 5119200 5119200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47619 5100 42720 399363 315100 315100 1 SLPDFTELDLQGK Unmodified 1461.7351 0.73512469 1142 P22670 RFX1 MHC class II regulatory factor RFX1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 83.892 83.957 2 3.0676E-05 97202 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 107.83 89.519 139430000 0 0 0 4292900 7496600 12070000 10262000 8382500 8733500 13700000 13781000 20973000 8516500 10338000 20886000 47620 1142 42721 399364;399365;399366;399367;399368;399369;399370;399371;399372;399373;399374;399375 315101;315102;315103;315104;315105;315106;315107;315108;315109;315110;315111;315112;315113;315114;315115;315116;315117 315101 17 SLPEEDVAEIQHAEEFLIKPESK Unmodified 2637.3174 0.31737756 436 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 94.536 87.495 3;4 8.5503E-11 111553 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.611 56.248 39641000 29922000 9718500 0 0 0 0 0 0 0 0 0 0 0 0 0 47621 436 42722 399376;399377;399378 315118;315119;315120 315119 3 SLPEEVVR Unmodified 927.50255 0.50254598 463 O75150 RNF40 E3 ubiquitin-protein ligase BRE1B yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 42.63 42.871 2 0.014742 46634 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.998 31.676 181690000 0 0 0 0 10264000 12299000 15112000 12199000 8853900 12911000 20707000 20222000 21768000 17990000 29362000 47622 463 42723 399379;399380;399381;399382;399383;399384;399385;399386;399387;399388;399389 315121 315121 1 SLPEEVVRETGEYR Unmodified 1662.8213 0.82131394 463 O75150 RNF40 E3 ubiquitin-protein ligase BRE1B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 63.66 63.793 3 0.0097879 72094 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.613 29.833 56343000 0 0 0 0 3007400 5226200 0 4951600 4429000 6964600 5546400 0 5424600 5967100 14826000 47623 463 42724 399390;399391;399392;399393;399394;399395;399396;399397;399398 315122;315123;315124;315125 315124 4 SLPEYLENMVIK Oxidation (M) 1450.7378 0.73776723 3839 Q96FV9 THOC1 THO complex subunit 1 yes yes 0 1 0 By MS/MS 2 0 1 1 84.523 79.78 2 0.010056 99136 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.303 36.186 22242000 0 22242000 0 0 0 0 0 0 0 0 0 0 0 0 0 47624 3839 42725 399399 315126 315126 5360 1 SLPEYLENMVIK Unmodified 1434.7429 0.74285261 3839 Q96FV9 THOC1 THO complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 95.118 90.254 2 0.00094841 111851 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.108 60.635 46305000 0 46305000 0 0 0 0 0 0 0 0 0 0 0 0 0 47625 3839 42725 399400;399401 315127;315128 315127 2 SLPFFSAR Unmodified 923.4865 0.48650199 5246 Q9Y5R8 TRAPPC1 Trafficking protein particle complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.901 76.962 2 0.045385 88229 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.561 27.015 30833000 0 0 0 1324900 1850200 1951000 2433100 2023400 1271500 2275600 3004500 3763100 2364300 2874600 5697000 47626 5246 42726 399402;399403;399404;399405;399406;399407;399408;399409;399410;399411;399412;399413 315129 315129 1 SLPFGAQSTQR Unmodified 1190.6044 0.60438529 4903 Q9UHL4 DPP7 Dipeptidyl peptidase 2 yes yes 0 0 0 By MS/MS 10 0 1 1 47.862 47.272 2 0.016217 53983 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 44.425 15.276 10032000 0 0 0 10032000 0 0 0 0 0 0 0 0 0 0 0 47627 4903 42727 399414 315130 315130 1 SLPFSENVSAVQK Unmodified 1404.7249 0.72489436 2604 Q16513 PKN2 Serine/threonine-protein kinase N2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 67.399 67.049 2 7.0864E-08 76846 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 118.4 89.445 553160000 0 88629000 0 21261000 25814000 45155000 38318000 29751000 27122000 42663000 50690000 44311000 38221000 34307000 66920000 47628 2604 42728 399415;399416;399417;399418;399419;399420;399421;399422;399423;399424;399425;399426;399427 315131;315132;315133;315134;315135;315136;315137;315138;315139;315140;315141;315142;315143;315144;315145;315146;315147;315148 315142 18 SLPGAEDYIK Unmodified 1091.5499 0.5498901 536 O75718 CRTAP Cartilage-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.87 3 5 1 1 1 1 1 1 1 1 58.169 56.111 2 0.037846 63146 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.724 22.876 234120000 7014100 140820000 3077300 0 0 15005000 0 0 5984400 0 37777000 0 8930800 0 15510000 47629 536 42729 399428;399429;399430;399431;399432;399433;399434;399435 315149;315150;315151 315150 2 SLPGPAPCLK Unmodified 1038.5532 0.55320134 2053 Q01433 AMPD2 AMP deaminase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 51.372 51.75 2 0.01279 58659 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 51.854 32.377 63110000 0 0 0 0 0 0 3803300 0 0 7240500 12155000 13047000 0 9131100 17733000 47630 2053 42730 399436;399437;399438;399439;399440;399441 315152;315153;315154;315155;315156;315157 315152 6 SLPGQNEDLVLTGYQVDK Unmodified 1974.9898 0.98983583 742 P01040 CSTA Cystatin-A;Cystatin-A, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.68 1.57 1 24 1 2 2 2 2 2 2 2 2 2 2 2 2 78.298 78.167 2;3 4.1006E-53 95912 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 181.76 158.73 5493900000 0 349620000 0 1167900000 339250000 290980000 252210000 543930000 216750000 424410000 378160000 611290000 267930000 264320000 387180000 47631 742 42731 399442;399443;399444;399445;399446;399447;399448;399449;399450;399451;399452;399453;399454;399455;399456;399457;399458;399459;399460;399461;399462;399463;399464;399465;399466 315158;315159;315160;315161;315162;315163;315164;315165;315166;315167;315168;315169;315170;315171;315172;315173;315174 315161 16 SLPHLPGTPRPTSSLPPGSVK Unmodified 2124.1691 0.1691376 2398 Q14244 MAP7 Ensconsin yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.265 66.35 4 0.0097271 75562 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 31.488 26.488 163070000 0 0 0 6812900 4866900 16978000 10592000 11328000 14547000 12967000 13614000 26104000 8787000 9826400 26647000 47632 2398 42732 399467;399468;399469;399470;399471;399472;399473;399474;399475;399476;399477;399478 315175;315176 315176 0 SLPIYSPEK Unmodified 1032.5492 0.54916182 367 O43795 MYO1B Unconventional myosin-Ib yes yes 0 0 0 By matching By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 52.235 52.567 2 0.010372 59583 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 64.42 28.54 16298000 0 0 0 0 0 0 0 2457700 0 0 0 0 5226000 2791400 5822900 47633 367 42733 399479;399480;399481;399482 315177;315178 315178 2 SLPLNPK Acetyl (Protein N-term) 809.4647 0.46470391 1890 P62306 SNRPF Small nuclear ribonucleoprotein F yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.07 2.62 1 2 24 2 1 2 2 2 2 2 2 2 2 2 2 2 2 62.533 62.296 1;2 0.0095075 90147 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 80.555 29.519 1189200000 209970000 15928000 0 43389000 56718000 58900000 63364000 77651000 40714000 80673000 96772000 103360000 79777000 90731000 171270000 47634 1890 42734 399483;399484;399485;399486;399487;399488;399489;399490;399491;399492;399493;399494;399495;399496;399497;399498;399499;399500;399501;399502;399503;399504;399505;399506;399507;399508;399509 315179;315180;315181;315182;315183;315184;315185;315186;315187;315188;315189 315183 6 SLPLNPKPFLNGLTGKPVMVK Acetyl (Protein N-term);Oxidation (M) 2307.3025 0.30245996 1890 P62306 SNRPF Small nuclear ribonucleoprotein F yes yes 1 1 2 By MS/MS 2 0 1 1 96.397 88.267 3 2.5052E-07 114006 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.376 69.909 34293000 34293000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47635 1890 42735 399510 315190 315190 3063 1 SLPLNPKPFLNGLTGKPVMVK Acetyl (Protein N-term) 2291.3075 0.30754534 1890 P62306 SNRPF Small nuclear ribonucleoprotein F yes yes 1 0 2 By MS/MS 2 0 1 1 97.394 89.263 3 4.06E-09 115245 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.139 56.486 26481000 26481000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47636 1890 42735 399511 315191 315191 1 SLPLSEGGPPLR Unmodified 1221.6717 0.67173657 3999 Q96T58 SPEN Msx2-interacting protein yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 65.644 66.073 2 0.0043631 74952 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.1 44.963 15152000 0 0 0 0 0 0 0 0 0 0 4020200 5202100 0 0 5929900 47637 3999 42736 399512;399513;399514 315192 315192 1 SLPLTEEQRK Acetyl (Protein N-term) 1241.6616 0.66156582 4763 Q9NZC9 SMARCAL1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 2 1 1 1 1 1 51.123 49.593 2 0.0028256 56465 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 79.906 29.203 65732000 0 24051000 0 6559400 0 5034300 0 10761000 0 7281700 0 0 0 12044000 0 47638 4763 42737 399515;399516;399517;399518;399519;399520;399521;399522;399523;399524;399525;399526;399527 315193;315194;315195;315196;315197;315198;315199;315200;315201;315202;315203 315195 10 SLPLVQVDEK Unmodified 1126.6234 0.6233894 3640 Q92615 LARP4B La-related protein 4B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 63.367 63.447 2 0.0054644 72715 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 68.846 30.76 130240000 0 0 0 7422600 9174300 10603000 0 0 10509000 14973000 17111000 13451000 11064000 12633000 23298000 47639 3640 42738 399528;399529;399530;399531;399532;399533;399534;399535;399536;399537 315204;315205;315206;315207;315208 315207 5 SLPNEEIVQK Unmodified 1155.6136 0.61355299 1074 P18583 SON Protein SON yes yes 0 0 0 By MS/MS 2 0 1 1 47.376 41.813 2 0.034131 54483 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.621 37.148 13128000 0 13128000 0 0 0 0 0 0 0 0 0 0 0 0 0 47640 1074 42739 399538 315209 315209 1 SLPQSDPVLK Unmodified 1082.5972 0.59717465 4506 Q9HC38 GLOD4 Glyoxalase domain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 1 1 6 2 1 1 1 1 1 1 46.692 45.499 2 0.010798 49999 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.37 30.738 102190000 0 35063000 0 3746200 1942900 0 0 0 0 0 12084000 13403000 0 9618600 26329000 47641 4506 42740 399539;399540;399541;399542;399543;399544;399545;399546 315210;315211;315212;315213 315211 4 SLPSAVYCIEDK Unmodified 1380.6595 0.65951691 312 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.12 3.26 1 1 6 2 1 1 1 1 1 1 70.33 69.128 2 0.0057803 87371 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.958 49.265 176280000 0 140170000 0 4064800 5257000 0 4839100 9184400 5353600 0 0 0 7403300 0 0 47642 312 42741 399547;399548;399549;399550;399551;399552;399553;399554 315214;315215;315216;315217;315218;315219;315220 315215 7 SLPSDLAFNGDLAK Unmodified 1446.7355 0.73545904 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 78.524 78.218 2 0.00036949 89738 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 88.187 61.514 450360000 0 47300000 0 17976000 20910000 27345000 23589000 28803000 24628000 50831000 43116000 42556000 29772000 33262000 60275000 47643 4285 42742 399555;399556;399557;399558;399559;399560;399561;399562;399563;399564;399565;399566;399567 315221;315222;315223;315224;315225;315226;315227;315228;315229;315230;315231;315232;315233;315234;315235;315236 315230 15 SLPSLVPLR Unmodified 980.60187 0.6018661 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.9 78.958 2 0.0053645 91262 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 77.923 35.053 66668000 0 0 0 3275000 3938300 4759800 3634900 6253900 2600500 8224300 4909800 8681700 6092100 5642800 8654400 47644 5189 42743 399568;399569;399570;399571;399572;399573;399574;399575;399576;399577;399578;399579 315237;315238;315239;315240;315241;315242;315243;315244;315245;315246;315247 315238 11 SLPSQQMVNR Unmodified 1158.5815 0.58154136 4371 Q9H2P0 ADNP Activity-dependent neuroprotector homeobox protein yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 34.655 34.83 2 0.03523 37336 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 49.418 31.598 6278100 0 0 0 0 0 0 2243500 1558900 0 0 0 0 0 2475600 0 47645 4371 42744 399580;399581;399582 315248 315248 1 SLPSTSSTSSTK Unmodified 1181.5776 0.57756142 2199 Q12857 NFIA Nuclear factor 1 A-type yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.757 14.927 2 2.4838E-05 14462 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 109.42 88.119 1239600000 0 0 0 62106000 36056000 51229000 81913000 52973000 64593000 100960000 141290000 119420000 127790000 143810000 257490000 47646 2199 42745 399583;399584;399585;399586;399587;399588;399589;399590;399591;399592;399593;399594 315249;315250;315251;315252;315253;315254;315255;315256 315256 8 SLPTPAVLLSPTK Unmodified 1322.781 0.78095267 3581 Q8WX93 PALLD Palladin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 83.996 83.473 2 6.7165E-08 96228 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 99.752 75.763 574190000 0 28561000 0 20482000 20690000 25305000 26310000 29603000 42387000 69113000 52954000 61974000 38628000 63085000 95097000 47647 3581 42746 399595;399596;399597;399598;399599;399600;399601;399602;399603;399604;399605;399606;399607;399608 315257;315258;315259;315260;315261;315262;315263;315264;315265;315266;315267;315268;315269;315270;315271 315264 11 SLPTTVPESPNYR Unmodified 1459.7307 0.73070802 2961 Q6PKG0 LARP1 La-related protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.794 56.91 2 8.8982E-05 65090 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 85.958 67.213 141020000 0 0 0 10878000 10347000 12417000 12032000 0 9772800 11821000 15025000 19487000 11998000 12208000 15030000 47648 2961 42747 399609;399610;399611;399612;399613;399614;399615;399616;399617;399618;399619;399620 315272;315273;315274;315275;315276;315277;315278;315279;315280;315281;315282;315283 315283 12 SLPVEEQPK Unmodified 1025.5393 0.53932542 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 30.92 31.085 2 0.021188 34141 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 52.482 38.325 418060000 0 0 0 29193000 30161000 42590000 36674000 36852000 0 44260000 49054000 82571000 0 0 66703000 47649 2930 42748 399621;399622;399623;399624;399625;399626;399627;399628;399629 315284;315285 315284 2 SLPVGYNISK Unmodified 1076.5866 0.58660996 4161 Q9BUI4 POLR3C DNA-directed RNA polymerase III subunit RPC3 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 54.311 54.617 2 0.029599 61514 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 43.297 22.427 63272000 0 0 0 0 0 6060900 0 5996000 3517700 8322100 8257300 8916600 0 6464800 15736000 47650 4161 42749 399630;399631;399632;399633;399634;399635;399636;399637 315286 315286 1 SLPVPQLVPETEDEK Unmodified 1679.8618 0.86178177 120 O00154 ACOT7 Cytosolic acyl coenzyme A thioester hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 2 2 2 1 1 1 2 2 2 1 1 1 79.569 79.594 2;3 1.1535E-26 91754 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 125.54 112.36 10444000000 0 0 0 816360000 1818600000 1664700000 21674000 16362000 12129000 1448200000 1967700000 2591200000 20855000 25294000 40863000 47651 120 42750 399638;399639;399640;399641;399642;399643;399644;399645;399646;399647;399648;399649;399650;399651;399652;399653;399654;399655 315287;315288;315289;315290;315291;315292;315293;315294;315295;315296;315297;315298;315299;315300;315301;315302;315303;315304;315305;315306;315307;315308;315309;315310;315311;315312;315313;315314 315290 28 SLPVPQLVPETEDEKK Unmodified 1807.9567 0.95674479 120 O00154 ACOT7 Cytosolic acyl coenzyme A thioester hydrolase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 2 2 2 1 1 2 2 2 1 1 73.936 73.928 2;3 0.00025172 84907 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 58.164 54.062 1826200000 0 0 0 220550000 348400000 163690000 6937200 3511900 0 211480000 312640000 548910000 5163300 4950600 0 47652 120 42751 399656;399657;399658;399659;399660;399661;399662;399663;399664;399665;399666;399667;399668;399669;399670;399671 315315;315316;315317;315318;315319;315320;315321;315322;315323;315324;315325 315322 11 SLPVSVPVWGFK Unmodified 1314.7336 0.73360855 3750 Q96B36 AKT1S1 Proline-rich AKT1 substrate 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 90.747 90.444 2 0.01106 113154 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.162 44.388 74935000 0 23410000 0 0 977090 2347100 1802400 3417800 2224000 4785800 3358600 4237600 2449000 3690500 22234000 47653 3750 42752 399672;399673;399674;399675;399676;399677;399678;399679;399680;399681;399682;399683 315326;315327;315328;315329;315330 315327 3 SLPYNQPGTCYTLVALPK Unmodified 2021.0292 0.029198224 5267 Q9Y678 COPG1 Coatomer subunit gamma-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 1 1 1 1 2 2 2 1 2 2 83.615 83.733 2;3 3.628E-05 97157 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 72.29 41.852 123820000 0 0 0 0 3329700 6194800 4797600 4343100 9020200 15605000 21969000 18257000 5092000 10421000 24791000 47654 5267 42753 399684;399685;399686;399687;399688;399689;399690;399691;399692;399693;399694;399695;399696;399697;399698;399699 315331;315332;315333;315334;315335;315336;315337;315338;315339 315338 9 SLQAALSGNLER Unmodified 1257.6677 0.66771383 572 O76027 ANXA9 Annexin A9 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 62.052 62.231 2 0.0057609 71219 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 53.237 22.501 2648600 0 0 0 0 0 0 0 2648600 0 0 0 0 0 0 0 47655 572 42754 399700;399701 315340;315341 315341 2 SLQADTTNTDTALTTLEEALAEK Unmodified 2435.1915 0.19150834 3217 Q8IUD2 ERC1 ELKS/Rab6-interacting/CAST family member 1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 4 2 5 1 97.717 93.834 2;3 1.1087E-218 115646 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 237.01 218.91 172560000 0 170400000 2159500 0 0 0 0 0 0 0 0 0 0 0 0 47656 3217 42755 399702;399703;399704;399705;399706;399707 315342;315343;315344;315345;315346;315347 315343 5 SLQAERNKPTK Unmodified 1270.6993 0.69934831 1733 P54136 RARS Arginine--tRNA ligase, cytoplasmic yes yes 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 7.3138 4.4475 3 0.024475 7740 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.977 46.139 349650000 346170000 0 3486100 0 0 0 0 0 0 0 0 0 0 0 0 47657 1733 42756 399708;399709 315348 315348 1 SLQALGEVIEAELRSTK Unmodified 1843.0051 0.005091963 5090 Q9Y285 FARSA Phenylalanine--tRNA ligase alpha subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 98.383 93.731 3 2.2912E-19 112905 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 98.796 76.642 20845000 5427000 14386000 1032300 0 0 0 0 0 0 0 0 0 0 0 0 47658 5090 42757 399710;399711;399712;399713 315349;315350;315351 315350 3 SLQAPSVK Unmodified 828.47052 0.47051757 214 O14777 NDC80 Kinetochore protein NDC80 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 33.812 29.058 2 0.012113 38083 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.28 25.25 177730000 9294000 166640000 1800100 0 0 0 0 0 0 0 0 0 0 0 0 47659 214 42758 399714;399715;399716 315352 315352 1 SLQAQLQR Unmodified 942.52468 0.52467841 4635 Q9NTJ5 SACM1L Phosphatidylinositide phosphatase SAC1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 30.586 30.717 2 0.03623 33807 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 52.018 3.5142 17346000 0 0 0 0 2518900 2172500 2354100 2335700 1804900 0 2219100 0 1896100 2044700 0 47660 4635 42759 399717;399718;399719;399720;399721;399722;399723;399724 315353 315353 1 SLQAVPGAK Unmodified 869.49707 0.49706667 1802 P58107 EPPK1 Epiplakin yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 25.815 25.799 2 0.012192 27649 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 61.679 8.9957 24245000 0 0 0 13638000 0 0 0 10607000 0 0 0 0 0 0 0 47661 1802 42760 399725;399726 315354 315354 1 SLQCENLK Unmodified 990.48043 0.48043033 3964 Q96R06 SPAG5 Sperm-associated antigen 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 21.694 21.934 2 0.028761 22958 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 56.547 19.453 66117000 0 0 0 8570500 0 0 0 0 11914000 0 0 0 31371000 0 14262000 47662 3964 42761 399727;399728;399729;399730 315355 315355 1 SLQDIIAILGMDELSEEDK Unmodified 2118.0402 0.04021642 823 P06576 ATP5B ATP synthase subunit beta, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 102.23 94.101 2 3.1257E-09 121076 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 128.71 108.28 24827000 24827000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47663 823 42762 399731 315356 315356 1 SLQEEEPCPR Unmodified 1243.5503 0.55030081 4988 Q9UL63 MKLN1 Muskelin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 27.061 26.312 2 0.004222 32725 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.657 75.506 16045000 0 8812400 0 0 0 0 0 0 0 0 0 0 2400300 1777900 3054900 47664 4988 42763 399732;399733;399734;399735 315357;315358 315357 2 SLQEELSLAR Unmodified 1144.6088 0.60880197 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 0 By MS/MS 10 0 1 1 64.866 65.419 2 0.008804 74214 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.153 0.78296 14278000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14278000 47665 2446 42764 399736 315359 315359 1 SLQEEPVEGFR Unmodified 1289.6252 0.62518031 3028 Q712K3 UBE2R2 Ubiquitin-conjugating enzyme E2 R2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 53.089 53.166 2 0.015888 61096 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 59.426 30.264 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47666 3028 42765 399737;399738 315360;315361 315361 2 SLQENEEEEIGNLELAWDMLDLAK Unmodified 2788.3113 0.3113059 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 102.03 97.886 2;3 3.3941E-16 121021 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.114 88.64 58488000 5952400 52536000 0 0 0 0 0 0 0 0 0 0 0 0 0 47667 1564 42766 399739;399740;399741 315362;315363;315364;315365;315366 315362 5 SLQENEEEEIGNLELAWDMLDLAK Oxidation (M) 2804.3062 0.30622052 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 1 0 By MS/MS 2 0 1 1 99.794 91.664 3 4.2566E-33 117985 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.75 104.71 51966000 51966000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47668 1564 42766 399742 315367 315367 2489 0 SLQESDSINNLQAELNK Unmodified 1901.933 0.93304923 3992 Q96SN8 CDK5RAP2 CDK5 regulatory subunit-associated protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 76.861 72.024 2 3.2649E-182 89951 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 242.8 201.4 43984000 0 43984000 0 0 0 0 0 0 0 0 0 0 0 0 0 47669 3992 42767 399743 315368 315368 1 SLQFTNPGR Unmodified 1018.5196 0.51959303 3370 Q8N8R7 ARL14EP ARL14 effector protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 2 1 1 1 1 1 1 1 1 1 1 1 42.265 42.388 2 0.0031541 47428 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 92.439 47.992 75456000 0 0 0 6389200 4089500 6667900 5638400 3626600 4286600 6056400 8172400 8956500 6962800 5081200 9528900 47670 3370 42768 399744;399745;399746;399747;399748;399749;399750;399751;399752;399753;399754;399755;399756 315369;315370;315371;315372;315373;315374;315375;315376;315377;315378;315379;315380 315377 12 SLQGRTDPIPIVVK Unmodified 1521.8879 0.88787736 4968 Q9UKJ3 GPATCH8 G patch domain-containing protein 8 yes yes 0 0 1 By MS/MS 2 0 1 1 77.114 68.984 3 0.0066176 90800 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.265 47.432 14138000 14138000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47671 4968 42769 399757 315381 315381 1 SLQGTLVSK Unmodified 931.53385 0.53384611 2558 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.859 35.039 2 0.020914 38597 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 52.716 11.064 108790000 0 0 0 5409600 5186500 8311400 6637600 7247400 8700300 9863500 12294000 9355400 12536000 8421000 14823000 47672 2558 42770 399758;399759;399760;399761;399762;399763;399764;399765;399766;399767;399768;399769 315382;315383 315383 2 SLQIVLPAR Unmodified 995.61277 0.61276513 14 A2RUS2 DENND3 DENN domain-containing protein 3 yes yes 0 0 0 By MS/MS 10 0 1 1 72.806 73.176 2 0.023827 83759 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.058 39.499 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47673 14 42771 399770 315384 315384 1 SLQLDIIPASIPGSEVK Unmodified 1765.9826 0.98256561 566 O75962 TRIO Triple functional domain protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 90.471 89.94 2 1.7811E-52 111791 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145.6 131.7 78941000 0 55787000 0 0 1023900 1589500 910370 1394700 1647900 3892000 2164700 2721700 1087800 1921400 4800100 47674 566 42772 399771;399772;399773;399774;399775;399776;399777;399778;399779;399780;399781;399782;399783 315385;315386;315387;315388;315389;315390;315391;315392;315393 315388 8 SLQNHQFELK Unmodified 1242.6357 0.63568542 3665 Q92805 GOLGA1 Golgin subfamily A member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 41.176 41.365 3 0.0087636 45717 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 41.704 27.259 109250000 0 0 0 6819400 6965900 11614000 0 6788500 6805500 8955900 13825000 15998000 11884000 6934500 12659000 47675 3665 42773 399784;399785;399786;399787;399788;399789;399790;399791;399792;399793;399794 315394;315395;315396;315397;315398;315399 315395 6 SLQPAVAEK Unmodified 941.5182 0.51819605 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 25.769 25.067 2 0.0046531 26566 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 86.136 26.93 368220000 0 133420000 0 38483000 40640000 48065000 0 0 0 60858000 46753000 0 0 0 0 47676 1364 42774 399795;399796;399797;399798;399799;399800 315400;315401;315402;315403;315404;315405;315406;315407 315402 5 SLQPLAPR Unmodified 880.51305 0.51305109 2444 Q14764 MVP Major vault protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 38.704 38.811 2 0.012727 41801 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 73.975 13.187 72059000 0 0 0 7817100 5059200 5816100 5574500 7845700 4488800 6095000 9492800 10876000 0 8994500 0 47677 2444 42775 399801;399802;399803;399804;399805;399806;399807;399808;399809;399810 315408;315409;315410;315411;315412 315410 5 SLQQGPDGLRK Unmodified 1197.6466 0.64658446 4363 Q9H2D6 TRIOBP TRIO and F-actin-binding protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 22.131 22.343 3 0.0096032 23724 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 38.875 14.021 120750000 0 0 0 7010000 6772900 9668600 7588400 9109100 0 16616000 11870000 14676000 14273000 7810200 15355000 47678 4363 42776 399811;399812;399813;399814;399815;399816;399817;399818;399819;399820;399821 315413;315414;315415;315416 315416 4 SLQQLAEER Unmodified 1072.5513 0.55128709 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 43.397 43.769 2 0.0044648 47935 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 86.744 12.56 117770000 0 0 0 0 0 0 15391000 0 0 0 27653000 0 20498000 17989000 36238000 47679 2344 42777 399822;399823;399824;399825;399826;399827 315417;315418;315419;315420;315421;315422;315423 315421 7 SLQQPGLPSQSCSVQSSGGQPPGR Unmodified 2438.1608 0.16083411 2697 Q53ET0 CRTC2 CREB-regulated transcription coactivator 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 53.273 53.177 3 2.7461E-12 60276 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 51.645 47.617 14127000 0 0 0 0 4246100 0 6783300 3097500 0 0 0 0 0 0 0 47680 2697 42778 399828;399829;399830;399831 315424;315425;315426;315427;315428;315429 315425 6 SLQQQQQQQQLQK Unmodified 1611.8329 0.83288168 3330 Q8N4C8 MINK1 Misshapen-like kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.31 19.506 2 3.59E-05 19946 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 111.61 95.717 30348000 0 0 0 2287700 1934100 1916900 2081900 1751600 1946600 3387700 2518300 3500000 2892900 2358000 3772800 47681 3330 42779 399832;399833;399834;399835;399836;399837;399838;399839;399840;399841;399842;399843 315430;315431;315432;315433 315430 4 SLQQVDEHSKPPHLR Unmodified 1769.9173 0.91728001 602 O94913 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 31.572 31.79 4 0.0088629 34802 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 37.555 31.639 104110000 0 0 0 4969500 0 14355000 6322900 9916200 11382000 6419700 0 10071000 15457000 7262700 17950000 47682 602 42780 399844;399845;399846;399847;399848;399849;399850;399851;399852;399853 315434 315434 1 SLQSAQYLR Acetyl (Protein N-term) 1106.572 0.57202253 3617 Q92540 SMG7 Protein SMG7 yes yes 1 0 0 By MS/MS 10 0 1 1 65.551 65.696 2 0.039636 75579 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 53.968 27.584 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47683 3617 42781 399854 315435 315435 1 SLQSDLEAEQVK Unmodified 1345.6725 0.67252444 1517 P46939 UTRN Utrophin yes yes 0 0 0 By MS/MS 2 0 1 1 59.444 53.602 2 0.014581 69077 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.2 24.639 22351000 0 22351000 0 0 0 0 0 0 0 0 0 0 0 0 0 47684 1517 42782 399855 315436 315436 1 SLQSENAALR Unmodified 1087.5622 0.56218613 1406;2357 P39880;Q13948 CUX1 Homeobox protein cut-like 1;Protein CASP no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.88 28.077 2 0.0014446 29948 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 92.051 35.004 252440000 0 0 0 11632000 18884000 21000000 21132000 14350000 15413000 21582000 23879000 21407000 23242000 24657000 35262000 47685 1406;2357 42783 399856;399857;399858;399859;399860;399861;399862;399863;399864;399865;399866;399867 315437;315438;315439;315440;315441;315442;315443;315444;315445;315446;315447;315448;315449 315442 11 SLQSLEK Unmodified 803.43888 0.43888309 5347 yes yes 0 0 0 By MS/MS 10 0 1 1 22.79 22.479 2 0.029815 23765 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 75.311 0 + 18185000 0 0 0 0 18185000 0 0 0 0 0 0 0 0 0 0 47686 5347 42784 399868 315450 315450 1 SLQSQLQNK Unmodified 1044.5564 0.55637247 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 26.673 26.877 2 0.0062061 28310 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 75.692 30.611 27636000 0 0 0 3502700 0 4991500 0 0 0 0 0 12620000 6521200 0 0 47687 2446 42785 399869;399870;399871;399872;399873;399874;399875 315451;315452;315453;315454;315455 315454 5 SLQSVAEER Unmodified 1017.5091 0.50908792 1845 P61313 RPL15 60S ribosomal protein L15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 28.927 29.107 2 0.0029087 31306 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 124.98 77.916 159620000 0 0 0 0 0 0 49770000 39648000 0 0 0 0 70203000 0 0 47688 1845 42786 399876;399877;399878 315456;315457;315458;315459 315457 4 SLQTLPTDSSTFDTDTFCPPRPK Unmodified 2610.2272 0.22718234 4570 Q9NQG6 MIEF1 Mitochondrial dynamics protein MID51 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 78.176 78.281 3 3.8449E-54 89996 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 85.945 78.498 111970000 0 0 0 0 5910300 6893300 6288100 8681300 7009000 13220000 11993000 14660000 7655200 12213000 17447000 47689 4570 42787 399879;399880;399881;399882;399883;399884;399885;399886;399887;399888;399889 315460;315461;315462;315463;315464;315465;315466;315467;315468;315469;315470;315471;315472;315473;315474;315475 315466 16 SLQTLRDIER Unmodified 1229.6728 0.67279921 3155 Q86UU0 BCL9L B-cell CLL/lymphoma 9-like protein yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.091 46.26 3 0.0042602 51965 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 57.836 35.362 142120000 0 0 0 9498700 4969000 8143700 10385000 19465000 12363000 9497300 15406000 10418000 13202000 9031400 19744000 47690 3155 42788 399890;399891;399892;399893;399894;399895;399896;399897;399898;399899;399900;399901 315476;315477;315478;315479 315479 4 SLQTVSGR Unmodified 846.45593 0.45593014 4278 Q9BZZ5 API5 Apoptosis inhibitor 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.294 14.456 2 0.0043249 12925 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 111.82 24.95 787340000 0 0 0 34002000 49180000 70878000 63454000 69925000 44016000 65341000 82555000 68118000 71404000 78722000 89745000 47691 4278 42789 399902;399903;399904;399905;399906;399907;399908;399909;399910;399911;399912;399913 315480;315481;315482;315483;315484;315485;315486;315487 315483 6 SLQVLNDK Acetyl (Protein N-term) 957.51311 0.51311067 5273 Q9Y6A5 TACC3 Transforming acidic coiled-coil-containing protein 3 yes yes 1 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 65.214 65.507 2 0.0044055 74243 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.877 29.403 16645000 0 0 0 0 0 0 2323900 0 0 2893500 0 4250500 0 3046100 4131300 47692 5273 42790 399914;399915;399916;399917;399918;399919 315488;315489;315490;315491;315492 315489 5 SLQYEYK Unmodified 929.44945 0.44944778 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.317 31.507 2 0.023725 34052 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 84.244 41.177 376750000 0 0 0 13434000 21220000 24477000 20857000 22980000 22924000 32683000 43472000 41126000 35411000 40218000 57946000 47693 528 42791 399920;399921;399922;399923;399924;399925;399926;399927;399928;399929;399930;399931 315493;315494;315495;315496;315497;315498;315499;315500;315501;315502;315503;315504 315497 12 SLQYSNTGDMILVVSGSSQAK Unmodified 2184.0732 0.073247883 4693 Q9NW82 WDR70 WD repeat-containing protein 70 yes yes 0 0 0 By MS/MS 3 0 1 1 84.376 80.741 2 0.046801 81743 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 26.124 18.58 1131100 1131100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47694 4693 42792 399932 315505 315505 1 SLRADYNLTR Unmodified 1207.6309 0.63093439 1210 P26640 VARS Valine--tRNA ligase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 37.584 37.782 3 0.0043967 41753 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 53.567 35.431 199060000 0 0 0 6113000 6146300 28055000 0 13845000 0 24641000 21641000 20570000 23609000 17748000 36690000 47695 1210 42793 399933;399934;399935;399936;399937;399938;399939;399940;399941;399942;399943 315506;315507;315508;315509;315510;315511;315512;315513;315514;315515;315516 315507 9 SLRECELYVQK Unmodified 1423.7129 0.71294946 927 P10644 PRKAR1A cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed yes yes 0 0 1 By MS/MS 2 0 1 1 49.728 41.902 3 0.0041338 57808 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.515 55.33 64131000 64131000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47696 927 42794 399944 315517 315517 1 SLREEQEEEEEGSWR Unmodified 1891.8184 0.8184134 497 O75420 GIGYF1 PERQ amino acid-rich with GYF domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By matching 10 0 4 1 1 1 1 37.15 37.35 3 0.0010358 41413 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 46.926 36.868 12980000 0 0 0 0 0 2729600 0 1885800 0 4058900 4305900 0 0 0 0 47697 497 42795 399945;399946;399947;399948 315518;315519 315519 2 SLREPVAQPGLLLQPSK Unmodified 1832.052 0.051982576 4288 Q9C0D5 TANC1 Protein TANC1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.211 73.276 3 0.00031319 84373 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 58.427 47.812 273460000 0 0 0 13362000 13579000 30711000 10498000 22135000 24612000 25336000 31855000 27315000 13962000 26591000 33501000 47698 4288 42796 399949;399950;399951;399952;399953;399954;399955;399956;399957;399958;399959;399960 315520;315521;315522;315523;315524;315525;315526;315527;315528;315529;315530;315531;315532 315521 11 SLRINSTATPDQDRDK Unmodified 1815.9075 0.90750318 4365 Q9H2G2 SLK STE20-like serine/threonine-protein kinase yes yes 0 0 2 By MS/MS 2 0 2 2 33.412 27.376 3;4 0.00020792 38448 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.82 66.899 287720000 287720000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47699 4365 42797 399961;399962 315533;315534;315535 315534 3 SLRPDPNFDALISK Unmodified 1571.8308 0.83075641 2130;4014 Q06587;Q99496 RING1;RNF2 E3 ubiquitin-protein ligase RING1;E3 ubiquitin-protein ligase RING2 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 75.173 75.242 3 0.00024977 86774 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 58.885 46.007 47693000 0 0 0 1825200 0 5470200 4395300 3698700 3840800 6752400 0 0 5498300 5100700 11112000 47700 2130;4014 42798 399963;399964;399965;399966;399967;399968;399969;399970;399971 315536;315537;315538;315539;315540;315541;315542;315543;315544 315537 9 SLRSSAEMIENTNSLGK Unmodified 1835.9047 0.90472599 2834 Q5VZL5 ZMYM4 Zinc finger MYM-type protein 4 yes yes 0 0 1 By MS/MS 2 0 1 1 66.084 57.79 3 0.025371 77526 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 31.745 17.954 16666000 16666000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47701 2834 42799 399972 315545 315545 1 SLRSSWASEEEANPAATK Unmodified 1932.9177 0.91773352 1469 P42858 HTT Huntingtin yes yes 0 0 1 By MS/MS 2 0 1 1 54.718 46.61 3 3.2129E-06 63761 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 92.993 83.071 28913000 28913000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47702 1469 42800 399973 315546;315547 315546 2 SLRVDIAEGRK Unmodified 1242.7044 0.70443369 2490 Q15056 EIF4H Eukaryotic translation initiation factor 4H yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 32.557 32.774 3 0.03822 34142 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.683 44.225 168900000 0 0 0 0 0 6217000 9180600 6143800 7120800 7181200 0 0 0 31717000 101340000 47703 2490 42801 399974;399975;399976;399977;399978;399979;399980 315548 315548 0 SLSAGRVVVVK Unmodified 1113.687 0.68699271 2540 Q15477 SKIV2L Helicase SKI2W yes yes 0 0 1 By MS/MS 2 0 1 1 50.693 42.793 2 0.041669 59144 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.349 29.923 8809300 8809300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47704 2540 42802 399981 315549 315549 1 SLSAIYLEK Unmodified 1022.5648 0.56481189 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.368 61.47 2 0.0051384 69746 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 82.426 57.607 110540000 0 0 0 10566000 6387600 8412700 8450200 6699100 6412000 7071600 11343000 13920000 9459300 6345600 15473000 47705 2501 42803 399982;399983;399984;399985;399986;399987;399988;399989;399990;399991;399992;399993 315550;315551;315552;315553;315554;315555;315556;315557;315558;315559;315560;315561 315559 12 SLSALAFSPDGK Unmodified 1191.6136 0.61355299 321 O43379 WDR62 WD repeat-containing protein 62 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.046 71.12 2 0.0018129 81067 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.85 35.423 44418000 0 0 0 3544100 2546500 4106800 3844200 3371500 2399400 3492100 3903000 4400900 3699800 3425600 5684100 47706 321 42804 399994;399995;399996;399997;399998;399999;400000;400001;400002;400003;400004;400005 315562;315563;315564;315565;315566;315567;315568;315569;315570;315571;315572 315565 11 SLSAVPDIGQCHQDELERLK Unmodified 2294.1325 0.1324941 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 1 By MS/MS 10 0 1 1 69.898 70.364 4 0.012461 80272 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 31.753 22.004 5197700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5197700 47707 2446 42805 400006 315573 315573 0 SLSDSESDDSK Unmodified 1168.4732 0.47315593 2249 Q13185 CBX3 Chromobox protein homolog 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.88 3.69 2 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 19.572 19.627 2 0.00092681 92502 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 109.66 98.972 184140000 64376000 79757000 0 1692800 2925500 4109900 4075900 2707700 4373700 2123000 5079100 2021100 2559800 3113600 5223200 47708 2249 42806 400007;400008;400009;400010;400011;400012;400013;400014;400015;400016;400017;400018;400019;400020;400021;400022 315574;315575;315576;315577;315578;315579;315580;315581;315582;315583;315584;315585 315577 12 SLSDTVEK Unmodified 877.43928 0.43927702 2391 Q14203 DCTN1 Dynactin subunit 1 yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 21.363 17.26 2 0.015338 22834 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.114 45.553 165510000 109130 165400000 0 0 0 0 0 0 0 0 0 0 0 0 0 47709 2391 42807 400023;400024 315586;315587 315587 2 SLSDWHLAVK Acetyl (Protein N-term) 1196.619 0.61897272 3986 Q96S82 UBL7 Ubiquitin-like protein 7 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.64 2.9 1 1 9 1 1 1 1 1 1 1 1 1 1 1 81.382 80.975 2 0.00062886 96753 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 103.56 62.534 46496000 0 5166200 6706100 0 0 2228400 0 1593000 1081100 4870600 5485900 3995700 2098100 2706200 10565000 47710 3986 42808 400025;400026;400027;400028;400029;400030;400031;400032;400033;400034;400035 315588;315589;315590;315591;315592;315593;315594;315595 315590 8 SLSEAMSVEK Unmodified 1079.5169 0.51687542 2916 Q6P1J9 CDC73 Parafibromin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.906 39.086 2 0.0014894 43790 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 90.761 70.623 370280000 0 0 0 14754000 18970000 21430000 19499000 16236000 15879000 35012000 43932000 39294000 46501000 38484000 60289000 47711 2916 42809 400036;400037;400038;400039;400040;400041;400042;400043;400044;400045;400046;400047 315596;315597;315598;315599;315600;315601;315602;315603;315604;315605;315606;315607;315608;315609;315610 315596 15 SLSEAMSVEK Oxidation (M) 1095.5118 0.51179004 2916 Q6P1J9 CDC73 Parafibromin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 8.86 2.8 1 6 1 1 1 1 1 1 1 21.588 21.126 2 0.0029596 22018 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 72.643 46.749 106460000 0 7418100 0 8929600 14191000 0 0 9483400 0 0 20034000 0 23366000 23038000 0 47712 2916 42809 400048;400049;400050;400051;400052;400053;400054 315611;315612;315613;315614 315612 4545 3 SLSEAPEDTSTR Unmodified 1291.5892 0.58918874 1433 P41214 EIF2D Eukaryotic translation initiation factor 2D yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 22.223 22.438 2 0.0020068 23625 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 64.297 22.421 47807000 0 0 0 2691300 1918100 2157200 2002100 0 0 3795500 6257400 12030000 4857200 4791100 7307500 47713 1433 42810 400055;400056;400057;400058;400059;400060;400061;400062;400063;400064 315615;315616;315617;315618;315619 315615 5 SLSEAPEDTSTRGLNQDSTDSK Unmodified 2337.0568 0.056805775 1433 P41214 EIF2D Eukaryotic translation initiation factor 2D yes yes 0 0 1 By MS/MS 2 0 1 1 40.071 35.047 3 1.53E-73 45727 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.19 102.94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47714 1433 42811 400065 315620 315620 1 SLSEEIK Unmodified 804.4229 0.42289868 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 25.39 25.592 2 0.023433 27240 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 85.359 8.5128 500590000 0 0 0 110570000 25872000 29532000 35783000 92053000 20159000 21815000 27987000 42243000 41106000 24543000 28931000 47715 1029 42812 400066;400067;400068;400069;400070;400071;400072;400073;400074;400075;400076;400077 315621;315622;315623;315624;315625 315621 5 SLSEGHPTAQHEK Unmodified 1419.6743 0.67425577 1591 P49748 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 6.6578 6.7821 2;3 3.2466E-16 5008 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 153.34 120.08 456170000 0 0 0 25335000 20181000 23934000 31030000 30052000 27761000 47749000 76699000 38406000 43165000 35809000 56044000 47716 1591 42813 400078;400079;400080;400081;400082;400083;400084;400085;400086;400087;400088;400089;400090;400091;400092;400093;400094;400095;400096;400097;400098;400099;400100;400101 315626;315627;315628;315629;315630;315631;315632;315633;315634;315635;315636;315637 315631 9 SLSELESLK Unmodified 1004.539 0.53899107 1132 P22059 OSBP Oxysterol-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 59.781 59.863 2 0.012702 67245 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.91 35.016 66599000 0 0 0 7527800 0 15300000 0 0 6583700 0 0 0 10794000 10199000 16194000 47717 1132 42814 400102;400103;400104;400105;400106;400107 315638;315639;315640 315639 3 SLSEYNNFK Unmodified 1100.5138 0.51383895 1179 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.08 3.33 2 1 9 3 1 1 1 1 1 1 1 1 1 42.501 41.414 2 0.002563 53684 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.16 79.602 130330000 0 80109000 0 0 0 2687400 3949000 3340300 3374200 5216000 8247600 8062900 0 7965800 7376700 47718 1179 42815 400108;400109;400110;400111;400112;400113;400114;400115;400116;400117;400118;400119 315641;315642;315643;315644;315645;315646;315647;315648;315649;315650 315645 10 SLSFEMQQDELIEK Oxidation (M) 1711.7975 0.79746695 5300 Q9Y6Y0 IVNS1ABP Influenza virus NS1A-binding protein yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 74.572 70.266 2 2.0561E-31 87938 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 151.98 129.29 61322000 0 61322000 0 0 0 0 0 0 0 0 0 0 0 0 0 47719 5300 42816 400120;400121 315651;315652 315651 6700 2 SLSFPILNPALSQPSQPSSPLPGSHGR Unmodified 2770.4402 0.44022708 3414 Q8ND24 RNF214 RING finger protein 214 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 88.203 88.375 3 5.1168E-60 102374 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.17 104.66 13288000 0 0 0 0 0 0 0 0 1270300 0 0 0 0 0 12018000 47720 3414 42817 400122;400123 315653;315654;315655 315654 3 SLSGELR Unmodified 760.40792 0.40791731 3255 Q8IX12 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.595 24.797 2 0.01917 26196 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 110.61 28.349 528340000 0 0 0 46081000 28587000 35602000 38077000 40898000 28478000 40298000 53133000 50813000 44793000 45504000 76081000 47721 3255 42818 400124;400125;400126;400127;400128;400129;400130;400131;400132;400133;400134;400135 315656;315657;315658;315659;315660;315661;315662 315658 6 SLSGELREVK Unmodified 1116.6139 0.61388734 3255 Q8IX12 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 44.604 39.248 2 0.023709 54255 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 92.239 41.18 50786000 37220000 0 13566000 0 0 0 0 0 0 0 0 0 0 0 0 47722 3255 42819 400136;400137 315663;315664;315665;315666 315665 4 SLSGLILK Unmodified 829.5273 0.52730417 3692;215 Q92973;O14787 TNPO1;TNPO2 Transportin-1;Transportin-2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 68.717 68.925 2 0.011381 78932 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 77.058 18.077 924160000 0 0 0 0 0 105970000 73744000 64074000 53052000 105920000 98194000 102060000 70287000 95017000 155830000 47723 3692;215 42820 400138;400139;400140;400141;400142;400143;400144;400145;400146;400147 315667;315668;315669;315670;315671;315672 315668 5 SLSHSPGVVK Unmodified 1009.5556 0.55564418 3036 Q76I76 SSH2 Protein phosphatase Slingshot homolog 2 yes yes 0 0 0 By MS/MS 2 0 1 1 22.789 17.892 2 0.0027014 25632 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.72 69.251 10946000 10946000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47724 3036 42821 400148 315673 315673 1 SLSLDPGQSLEPHPEGPQR Unmodified 2043.0021 0.0021318501 2024 P98174 FGD1 FYVE, RhoGEF and PH domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 66.352 66.446 3 5.3551E-06 75990 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 65.943 56.021 47698000 0 0 0 0 4208400 6206800 5343400 4147500 3191200 6172500 0 7836000 6270200 4322000 0 47725 2024 42822 400149;400150;400151;400152;400153;400154;400155;400156;400157;400158 315674;315675;315676;315677;315678;315679;315680;315681;315682;315683;315684 315676 11 SLSLEATSPLSAEK Unmodified 1431.7457 0.74568938 3206 Q86YC2 PALB2 Partner and localizer of BRCA2 yes yes 0 0 0 By MS/MS 2 0 1 1 74.819 69.663 2 0.0018856 87085 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.184 58.226 109940000 0 109940000 0 0 0 0 0 0 0 0 0 0 0 0 0 47726 3206 42823 400159 315685 315685 1 SLSLGPTFR Unmodified 976.53418 0.53418046 3008 Q6ZS17 FAM65A Protein FAM65A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.508 65.595 2 0.012914 75342 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 60.59 37.57 61929000 0 0 0 3091200 2918500 7067500 4447800 4221900 3260300 6506300 6194800 6740600 4204100 5289400 7986400 47727 3008 42824 400160;400161;400162;400163;400164;400165;400166;400167;400168;400169;400170;400171 315686;315687;315688;315689;315690 315688 5 SLSLPTTAPSNSSSLTLSGIK Unmodified 2060.1001 0.10011456 917 P10244 MYBL2 Myb-related protein B yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 82.313 82.356 2 3.8434E-28 95516 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 100.11 89.206 43502000 0 0 0 1408500 3270000 5080700 2873200 4729400 3691500 5438100 5179100 8343000 3489000 0 0 47728 917 42825 400172;400173;400174;400175;400176;400177;400178;400179;400180;400181 315691;315692;315693;315694;315695;315696;315697;315698;315699;315700 315699 10 SLSLQQQQDGDNGDSSK Unmodified 1805.8028 0.80276334 3903 Q96K76 USP47 Ubiquitin carboxyl-terminal hydrolase 47 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 27.823 27.509 2 2.4783E-38 30009 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 141.73 136.65 30969000 0 4072500 0 0 0 5386500 4213200 0 0 0 4466300 3759600 0 4656100 4414700 47729 3903 42826 400182;400183;400184;400185;400186;400187;400188 315701;315702;315703;315704;315705 315701 4 SLSMDSQVPVYSPSIDLK Oxidation (M) 1980.9714 0.97140857 4997 Q9ULJ3 ZBTB21 Zinc finger and BTB domain-containing protein 21 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 78.507 78.554 2 1.5909E-38 90853 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 134.56 112.52 75541000 0 0 0 3824900 6202700 4664600 5747300 6109600 0 10785000 7566100 8497900 7275200 6598600 8269800 47730 4997 42827 400189;400190;400191;400192;400193;400194;400195;400196;400197;400198;400199 315706;315707;315708;315709;315710;315711;315712;315713;315714;315715 315709 6339 10 SLSMELTIQK Oxidation (M) 1164.606 0.60602477 311 O43264 ZW10 Centromere/kinetochore protein zw10 homolog yes yes 0 1 0 By MS/MS 2 0 1 1 58.684 52.841 2 0.02886 68091 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 57.708 38.932 20534000 0 20534000 0 0 0 0 0 0 0 0 0 0 0 0 0 47731 311 42828 400200 315716;315717 315717 2 SLSNSNPDISGTPTSPDDEVR Unmodified 2186.9927 0.99274896 3933 Q96N67 DOCK7 Dedicator of cytokinesis protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 52.382 52.476 2 2.7941E-37 58478 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 107.61 97.557 80483000 0 0 0 4472800 4539600 7436100 5762500 5892100 4216300 10053000 7451000 0 11245000 6035200 13379000 47732 3933 42829 400201;400202;400203;400204;400205;400206;400207;400208;400209;400210;400211 315718;315719;315720;315721;315722;315723;315724;315725;315726;315727;315728 315724 11 SLSNTKPTVNEHDLLK Unmodified 1794.9476 0.94757708 484 O75351 VPS4B Vacuolar protein sorting-associated protein 4B yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 47.153 47.266 3 0.025854 53283 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 24.353 18.721 101280000 0 0 0 7043400 4673500 13083000 7181900 7243400 4564900 9864800 10398000 0 10556000 6559500 20109000 47733 484 42830 400212;400213;400214;400215;400216;400217;400218;400219;400220;400221;400222 315729 315729 1 SLSPDEER Unmodified 931.42469 0.42468959 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 14.336 14.477 2 0.027935 13892 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 57.047 44.059 38614000 0 0 0 5434700 0 0 4443600 6152500 3296600 4828300 0 6119000 8339700 0 0 47734 2804 42831 400223;400224;400225;400226;400227;400228;400229 315730;315731 315731 2 SLSPDEERLVSDIIDPVALEIPLSK Unmodified 2734.464 0.4640418 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 1 By MS/MS 2 0 1 1 100.96 96.252 3 5.2382E-05 118937 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.272 55.229 13991000 0 13991000 0 0 0 0 0 0 0 0 0 0 0 0 0 47735 2804 42832 400230 315732;315733 315732 2 SLSPFNDVVDK Unmodified 1219.6085 0.60846762 2838 Q63HN8 RNF213 E3 ubiquitin-protein ligase RNF213 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 72.177 67.618 2 0.0058125 85895 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.584 67.429 176100000 0 173680000 2422200 0 0 0 0 0 0 0 0 0 0 0 0 47736 2838 42833 400231;400232 315734 315734 0 SLSPILPGR Unmodified 938.55492 0.5549159 3012 Q6ZSZ5 ARHGEF18 Rho guanine nucleotide exchange factor 18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.395 60.499 2 0.0078425 67924 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.342 28.219 87650000 0 0 0 4650000 3419500 6098800 6876200 5112400 4356700 8984400 9319400 11603000 6216900 7560300 13452000 47737 3012 42834 400233;400234;400235;400236;400237;400238;400239;400240;400241;400242;400243;400244 315735;315736;315737;315738 315736 4 SLSPQDRAAYK Unmodified 1234.6306 0.63060004 1053 P17480 UBTF Nucleolar transcription factor 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 6 2 2 2 25.434 21.265 2;3 0.0010404 30417 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.672 49.91 363690000 271910000 52133000 39646000 0 0 0 0 0 0 0 0 0 0 0 0 47738 1053 42835 400245;400246;400247;400248;400249;400250 315739;315740;315741;315742 315740 2 SLSPSPESSASPVPSTQPQLTEGSHFMCV Unmodified 3043.3903 0.39030128 4489 Q9HAU0 PLEKHA5 Pleckstrin homology domain-containing family A member 5 yes yes 0 0 0 By MS/MS 2 0 1 1 87.251 82.443 3 0.043064 102449 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 16.202 9.8379 25229000 0 25229000 0 0 0 0 0 0 0 0 0 0 0 0 0 47739 4489 42836 400251 315743 315743 1 SLSQPTPPPMPILSQSEAK Unmodified 2007.0347 0.034677532 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS 8.4 3.2 1 4 1 1 1 1 1 81.3 80.496 2 5.7919E-10 99342 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.97 101.42 118380000 0 103880000 0 0 0 0 0 1843900 0 0 3134400 0 0 2699700 6819400 47740 5049 42837 400252;400253;400254;400255;400256 315744;315745 315744 2 SLSRPSSLIEQEK Unmodified 1472.7835 0.78347187 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.485 43.643 3 2.6733E-08 48104 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 84.173 57.168 161040000 0 0 0 6768500 7800500 13500000 8288200 12660000 9872700 12133000 19104000 24860000 0 18867000 27184000 47741 2193 42838 400257;400258;400259;400260;400261;400262;400263;400264;400265;400266;400267;400268 315746;315747;315748;315749;315750;315751;315752;315753;315754;315755;315756;315757;315758 315754 13 SLSRPTTETQFSNMGMEDVPLATSK 2 Oxidation (M) 2758.279 0.27895992 3201 Q86XZ4 SPATS2 Spermatogenesis-associated serine-rich protein 2 yes yes 0 2 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 61.84 61.655 3 1.1343E-08 70262 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 50.945 43.993 18056000 0 0 0 2380000 3050200 4038600 4853300 0 3733900 0 0 0 0 0 0 47742 3201 42839 400269;400270;400271;400272;400273 315759;315760;315761;315762;315763 315761 4818;4819 5 SLSSASSLDR Unmodified 1021.504 0.50400254 3657 Q92766 RREB1 Ras-responsive element-binding protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching 10 0 5 1 1 1 1 1 25.575 25.639 2 0.0039934 27167 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 74.464 25.67 79874000 0 0 0 0 12141000 17937000 0 22194000 0 13852000 0 0 13750000 0 0 47743 3657 42840 400274;400275;400276;400277;400278 315764;315765;315766 315764 3 SLSSDSTLLLFK Unmodified 1309.7129 0.71293269 4492 Q9HAW4 CLSPN Claspin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 84.431 84.529 2 0.00013678 97920 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 86.624 38.801 58531000 0 0 0 0 4300700 7296900 4872600 4801800 0 8109800 6780700 6627100 3202100 3012400 9527100 47744 4492 42841 400279;400280;400281;400282;400283;400284;400285;400286;400287;400288 315767;315768;315769;315770;315771;315772;315773;315774;315775;315776;315777 315768 11 SLSSPTDNLELSLR Unmodified 1530.789 0.78895118 5126 Q9Y2X7 GIT1 ARF GTPase-activating protein GIT1 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.238 77.296 2 1.9537E-17 89347 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 124.42 107.79 135380000 0 0 0 4236200 7658900 10358000 8478700 6460200 10321000 13724000 14421000 15827000 10578000 13664000 19652000 47745 5126 42842 400289;400290;400291;400292;400293;400294;400295;400296;400297;400298;400299;400300 315778;315779;315780;315781;315782;315783 315778 6 SLSSSLDDTEVK Unmodified 1279.6143 0.61434085 638 O95292 VAPB Vesicle-associated membrane protein-associated protein B/C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 44.723 45.021 2 0.0038795 50028 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 69.01 42.554 47584000 0 0 0 0 8909000 0 7065100 0 0 0 10359000 12323000 0 0 8927600 47746 638 42843 400301;400302;400303;400304;400305;400306 315784;315785;315786;315787;315788 315787 5 SLSSSPVK Unmodified 803.43888 0.43888309 4383 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.013 16.188 2 0.0099634 15906 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 81.191 16.623 403670000 0 0 0 15534000 16860000 16795000 24169000 19038000 24782000 31312000 77189000 41726000 46631000 40396000 49240000 47747 4383 42844 400307;400308;400309;400310;400311;400312;400313;400314;400315;400316;400317;400318 315789;315790;315791;315792;315793;315794;315795 315794 7 SLSTTNSSSSSGAPGPCGLAR Unmodified 1992.9171 0.91708159 3728 Q969V6 MKL1 MKL/myocardin-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 43.435 43.665 2 3.8434E-28 47885 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 131.53 116.33 43338000 0 0 0 0 2712200 4857200 2916500 0 0 6241700 0 7695900 9586500 0 9327900 47748 3728 42845 400319;400320;400321;400322;400323;400324;400325;400326 315796;315797;315798;315799;315800;315801 315799 6 SLSVPAASTAKPPPLPR Unmodified 1687.9621 0.96210494 1602 P49815 TSC2 Tuberin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.005 66.088 3 0.0021957 75628 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 54.281 45.234 92738000 0 0 0 4083600 4173700 6131600 5911600 6774100 6757700 8228300 7816500 13520000 6903400 9521500 12916000 47749 1602 42846 400327;400328;400329;400330;400331;400332;400333;400334;400335;400336;400337;400338 315802;315803;315804;315805;315806 315806 3 SLSVPDSGR Unmodified 916.46141 0.46140945 497 O75420 GIGYF1 PERQ amino acid-rich with GYF domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 30.38 30.393 2 0.031872 33364 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 47.574 17.907 70961000 0 0 0 7242200 6296200 11007000 7641100 8532200 7491900 10043000 0 0 12708000 0 0 47750 497 42847 400339;400340;400341;400342;400343;400344;400345;400346 315807;315808;315809 315809 3 SLSVSSDFLGK Unmodified 1138.587 0.58700389 2676 Q3V6T2 CCDC88A Girdin yes yes 0 0 0 By MS/MS 10 0 1 1 69.756 70.222 2 0.046696 80128 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.742 6.6184 3072400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3072400 47751 2676 42848 400347 315810 315810 0 SLTAEIDRLK Unmodified 1144.6452 0.64518747 1733 P54136 RARS Arginine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 5 20 2 1 2 1 2 2 2 2 2 2 2 1 2 2 59.604 58.584 2;3 0.00014179 81724 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 143.37 85.515 802980000 315500000 125340000 39884000 0 7017600 32504000 15249000 17079000 20078000 31589000 31488000 47209000 16743000 27570000 75737000 47752 1733 42849 400348;400349;400350;400351;400352;400353;400354;400355;400356;400357;400358;400359;400360;400361;400362;400363;400364;400365;400366;400367;400368;400369;400370;400371;400372 315811;315812;315813;315814;315815;315816;315817;315818;315819;315820;315821;315822;315823;315824;315825;315826;315827 315819 15 SLTALSEPR Unmodified 972.52401 0.52400971 3106 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 yes yes 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 41.766 41.739 2 0.02741 47232 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 49.418 24.495 5060700 0 0 0 0 1458000 0 0 0 2045000 0 0 0 0 1557600 0 47753 3106 42850 400373;400374;400375 315828 315828 1 SLTANPELIDR Unmodified 1227.6459 0.64591575 5110 Q9Y2L1 DIS3 Exosome complex exonuclease RRP44 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 57.106 57.185 2 0.00022441 64215 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 121.83 70.995 152500000 0 0 0 9238900 7485600 24232000 11793000 8274600 6082000 14764000 18722000 0 12324000 12779000 26801000 47754 5110 42851 400376;400377;400378;400379;400380;400381;400382;400383;400384;400385;400386;400387 315829;315830;315831;315832;315833;315834;315835;315836;315837;315838;315839;315840 315832 12 SLTANPELIDRLACLSEEGNEIESGK Unmodified 2844.3811 0.3811168 5110 Q9Y2L1 DIS3 Exosome complex exonuclease RRP44 yes yes 0 0 1 By MS/MS 2 0 1 1 95.694 90.83 3 0.00052299 112680 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 26.13 19.696 14738000 0 14738000 0 0 0 0 0 0 0 0 0 0 0 0 0 47755 5110 42852 400388 315841;315842 315841 2 SLTDQDVNSLAAQHFESQQDLENK Unmodified 2716.2576 0.25763085 4561 Q9NQ89 C12orf4 Protein C12orf4 yes yes 0 0 0 By MS/MS 3 0 1 1 75.07 71.514 3 0.0023663 86018 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 33.024 25.913 3655900 0 3655900 0 0 0 0 0 0 0 0 0 0 0 0 0 47756 4561 42853 400389 315843 315843 1 SLTDSLNDIK Unmodified 1104.5663 0.56626845 2801 Q5TKA1 LIN9 Protein lin-9 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 60.508 59.407 2 0.0065119 67116 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.711 33.482 168230000 0 95469000 0 0 0 8172900 0 0 0 10920000 14894000 13344000 9984100 0 15441000 47757 2801 42854 400390;400391;400392;400393;400394;400395;400396;400397;400398 315844;315845;315846;315847;315848;315849 315848 6 SLTEEQQQR Unmodified 1117.5364 0.53636531 4198 Q9BVW5 TIPIN TIMELESS-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 9.5285 9.8908 2 0.020914 8676 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 52.716 35.33 8632000 0 0 0 0 0 0 0 0 0 0 2146300 3317000 0 0 3168700 47758 4198 42855 400399;400400;400401 315850;315851 315851 2 SLTEEQQQRIER Unmodified 1515.7641 0.76413341 4198 Q9BVW5 TIPIN TIMELESS-interacting protein yes yes 0 0 1 By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 23.792 24.123 3 0.0444 24487 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 28.624 13.833 45617000 0 0 0 0 0 0 3549800 2248000 2283900 4896300 6551700 9991100 5702800 2184700 8209000 47759 4198 42856 400402;400403;400404;400405;400406;400407;400408;400409;400410 315852 315852 1 SLTEHGVAATDGR Unmodified 1312.6371 0.63714198 568 O75970 MPDZ Multiple PDZ domain protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.817 21.022 3 0.0072861 21274 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.112 42.164 56820000 0 0 0 2200800 2606100 4891600 2488900 3110100 2725100 5031100 7149000 8901700 7181600 3570300 6963600 47760 568 42857 400411;400412;400413;400414;400415;400416;400417;400418;400419;400420;400421;400422 315853;315854;315855;315856;315857;315858 315857 4 SLTEHGVAATDGRLK Unmodified 1553.8162 0.81616898 568 O75970 MPDZ Multiple PDZ domain protein yes yes 0 0 1 By MS/MS 2 0 1 1 39.366 32.804 3 0.0012027 45390 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.599 42.455 18134000 18134000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47761 568 42858 400423 315859 315859 1 SLTELFVK Unmodified 935.53278 0.53278348 3952 Q96Q11 TRNT1 CCA tRNA nucleotidyltransferase 1, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 80.246 76.607 2 0.022229 95495 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.753 12.393 96562000 0 52541000 44021000 0 0 0 0 0 0 0 0 0 0 0 0 47762 3952 42859 400424;400425 315860 315860 1 SLTELVQQPCPPIEASK Unmodified 1895.9663 0.96626362 1406 P39880 CUX1 Homeobox protein cut-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 76.643 76.116 2 5.0772E-146 93408 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 227.93 194.04 218650000 0 114950000 0 3914400 6175200 6941500 8803400 6895300 6382800 11103000 9488800 10967000 9962500 9418900 13647000 47763 1406 42860 400426;400427;400428;400429;400430;400431;400432;400433;400434;400435;400436;400437;400438;400439 315861;315862;315863;315864;315865;315866;315867;315868;315869;315870;315871;315872;315873;315874 315864 14 SLTEYLQNVEQK Unmodified 1450.7304 0.73037367 1328 P33176 KIF5B Kinesin-1 heavy chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.24 3.75 5 1 11 1 3 2 1 1 1 1 1 1 1 1 1 1 1 75.193 73.707 2;3 1.2629E-115 85052 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 215.93 180.49 1180800000 9693200 541700000 42094000 0 42147000 67917000 41871000 39180000 42327000 67951000 59862000 62350000 45430000 37953000 80315000 47764 1328 42861 400440;400441;400442;400443;400444;400445;400446;400447;400448;400449;400450;400451;400452;400453;400454;400455;400456 315875;315876;315877;315878;315879;315880;315881;315882;315883;315884;315885;315886;315887;315888;315889;315890;315891;315892 315886 18 SLTFVQAGQDLEENMDEDISEK Unmodified 2497.1166 0.11662884 3975 Q96RS6 NUDCD1 NudC domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 91.872 88.337 3 0.0028834 109674 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 32.956 29.004 32810000 0 30063000 2747400 0 0 0 0 0 0 0 0 0 0 0 0 47765 3975 42862 400457;400458;400459 315893;315894;315895 315893 3 SLTGQNTATNPPGLTGVSFSSSSSSSSSSSPSNENATSNS Unmodified 3819.6791 0.67908555 4178 Q9BV68 RNF126 E3 ubiquitin-protein ligase RNF126 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.113 76.171 3 0.0005232 87996 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 20.322 18.739 89573000 0 0 0 3966500 5884500 5265300 6960000 7309200 5153700 12246000 10381000 11012000 5112700 6882900 9398500 47766 4178 42863 400460;400461;400462;400463;400464;400465;400466;400467;400468;400469;400470;400471 315896;315897;315898;315899 315896 4 SLTGVVNAQALTSAFSPHTK Unmodified 2028.064 0.064003825 304 O43175 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.83 3.67 3 1 2 1 2 1 1 1 87.234 84.158 3 4.5956E-92 106735 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 136.49 131.78 493450000 84711000 195280000 937150 0 0 44841000 0 0 0 0 0 0 0 0 167680000 47767 304 42864 400472;400473;400474;400475;400476;400477 315900;315901;315902;315903;315904 315904 5 SLTIAEFK Unmodified 907.50148 0.50148335 4006 Q99426 TBCB Tubulin-folding cofactor B yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.363 64.454 2 0.016961 73792 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.429 22.312 76849000 0 0 0 1851900 1887300 6997400 3488500 3511000 2664800 9190300 9213700 8229200 3058800 5748800 21008000 47768 4006 42865 400478;400479;400480;400481;400482;400483;400484;400485;400486;400487;400488;400489 315905;315906;315907;315908 315905 4 SLTINGVADDDALAEER Unmodified 1787.8537 0.85373628 474 O75190 DNAJB6 DnaJ homolog subfamily B member 6 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 72.901 73.016 2 0.0047286 84207 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 58.098 45.331 42208000 0 0 0 0 2934000 5324200 3333500 0 3984100 4648000 7194400 4171600 3495900 2896300 4225600 47769 474 42866 400490;400491;400492;400493;400494;400495;400496;400497;400498;400499 315909 315909 1 SLTNDWEDHLAVK Unmodified 1526.7365 0.73652168 862;850 P07900;P08238 HSP90AA1;HSP90AB1 Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.01 3.79 46 8 31 12 30 12 2 2 2 2 3 3 3 2 3 2 4 3 73.453 70.813 2;3 7.5095E-302 78924 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 261.75 239.76 38469000000 2508300000 19403000000 9119500000 101710000 138620000 599580000 225010000 527960000 223110000 531690000 717910000 587720000 350200000 635800000 2798700000 47770 850;862 42867 400500;400501;400502;400503;400504;400505;400506;400507;400508;400509;400510;400511;400512;400513;400514;400515;400516;400517;400518;400519;400520;400521;400522;400523;400524;400525;400526;400527;400528;400529;400530;400531;400532;400533;400534;400535;400536;400537;400538;400539;400540;400541;400542;400543;400544;400545;400546;400547;400548;400549;400550;400551;400552;400553;400554;400555;400556;400557;400558;400559;400560;400561;400562;400563;400564;400565;400566;400567;400568;400569;400570;400571;400572;400573;400574;400575;400576;400577;400578;400579;400580;400581;400582;400583;400584 315910;315911;315912;315913;315914;315915;315916;315917;315918;315919;315920;315921;315922;315923;315924;315925;315926;315927;315928;315929;315930;315931;315932;315933;315934;315935;315936;315937;315938;315939;315940;315941;315942;315943;315944;315945;315946;315947;315948;315949;315950;315951;315952;315953;315954;315955;315956;315957;315958;315959;315960;315961;315962;315963;315964;315965;315966;315967;315968;315969;315970;315971;315972;315973;315974;315975;315976;315977;315978;315979;315980;315981;315982;315983;315984;315985;315986;315987;315988;315989;315990;315991;315992;315993;315994;315995;315996;315997;315998;315999;316000;316001;316002;316003;316004;316005;316006 315957 80 SLTNLSFLTDSEK Unmodified 1453.73 0.73003931 3432 Q8NEY1 NAV1 Neuron navigator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.794 81.855 2 2.5216E-13 94710 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 138.99 115.92 72235000 0 0 0 1764600 3875600 4785800 4271100 5609800 6826700 6542700 7840300 9539800 3495600 4859200 12823000 47771 3432 42868 400585;400586;400587;400588;400589;400590;400591;400592;400593;400594;400595;400596 316007;316008;316009;316010;316011;316012;316013;316014;316015;316016;316017;316018 316008 12 SLTNLSQEEQITK Unmodified 1489.7624 0.76240208 203 O14717 TRDMT1 tRNA (cytosine(38)-C(5))-methyltransferase yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 58.201 52.867 2 5.4653E-33 67922 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 191.55 172.29 38348000 0 38348000 0 0 0 0 0 0 0 0 0 0 0 0 0 47772 203 42869 400597;400598 316019;316020 316019 2 SLTPAVPVESK Unmodified 1126.6234 0.6233894 1113 P20810 CAST Calpastatin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 60.712 58.879 2 0.032231 72446 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 38.086 7.8977 79937000 0 55090000 0 0 0 0 12666000 12181000 0 0 0 0 0 0 0 47773 1113 42870 400599;400600;400601 316021;316022;316023 316021 3 SLTPAVPVESKPDK Unmodified 1466.7981 0.7980593 1113 P20810 CAST Calpastatin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.29 3.67 4 2 11 1 4 1 1 1 1 1 1 1 1 1 1 1 1 47.291 45.486 2;3 0.0005185 51284 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 63.754 48.321 394020000 12709000 196610000 6921000 6548400 0 18091000 9216800 7966700 17642000 14005000 20600000 20591000 17090000 15248000 30774000 47774 1113 42871 400602;400603;400604;400605;400606;400607;400608;400609;400610;400611;400612;400613;400614;400615;400616;400617;400618 316024;316025;316026;316027;316028;316029;316030;316031;316032;316033;316034;316035;316036;316037 316024 12 SLTPAVPVESKPDKPSGK Unmodified 1835.9993 0.9992783 1113 P20810 CAST Calpastatin yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.46 3.09 5 2 28 2 3 2 2 2 2 2 2 2 2 3 3 2 3 3 42.154 41.238 2;3;4 7.789E-30 52479 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 132.59 105.81 4427700000 924970000 115110000 617590000 116050000 114400000 118220000 188620000 132040000 132980000 188770000 335270000 466820000 215720000 220590000 540560000 47775 1113 42872 400619;400620;400621;400622;400623;400624;400625;400626;400627;400628;400629;400630;400631;400632;400633;400634;400635;400636;400637;400638;400639;400640;400641;400642;400643;400644;400645;400646;400647;400648;400649;400650;400651;400652;400653 316038;316039;316040;316041;316042;316043;316044;316045;316046;316047;316048;316049;316050;316051;316052;316053;316054;316055;316056;316057;316058;316059;316060;316061;316062;316063;316064;316065;316066;316067;316068;316069;316070;316071;316072;316073;316074 316063 30 SLTPVTLVLAEDGTIVDDDDYFLCLPSNTK Unmodified 3310.6167 0.61665563 138 O00273 DFFA DNA fragmentation factor subunit alpha yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 100.22 94.957 3 2.703E-07 119267 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.252 40.41 20490000 18796000 0 1694100 0 0 0 0 0 0 0 0 0 0 0 0 47776 138 42873 400654;400655 316075;316076 316075 2 SLTQSYLR Unmodified 966.51345 0.51344502 1707 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 0 0 0 By MS/MS 10 0 1 1 42.11 42.155 2 0.029724 47214 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 89.55 49.347 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47777 1707 42874 400656 316077 316077 1 SLTQTFGDDK Unmodified 1110.5193 0.51931826 3281 Q8IYB7 DIS3L2 DIS3-like exonuclease 2 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS 7 3.69 1 1 3 2 1 1 1 38.184 36.532 2 0.00057916 46632 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.37 101 105260000 0 90794000 0 0 0 3021200 0 0 0 0 0 4235500 0 0 7205300 47778 3281 42875 400657;400658;400659;400660;400661 316078;316079 316078 2 SLTSATSTSNIQSSASQPPRPQQGQVK Unmodified 2784.4002 0.40021276 2195 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 46.062 45.606 3 2.6444E-113 51210 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 148.89 119.41 151720000 14142000 0 0 6273200 7927300 12813000 8426000 9280300 8602200 10044000 11575000 16026000 15031000 11027000 20548000 47779 2195 42876 400662;400663;400664;400665;400666;400667;400668;400669;400670;400671;400672;400673;400674 316080;316081;316082;316083;316084;316085;316086;316087;316088;316089;316090;316091;316092 316086 13 SLTSCSSDITLR Unmodified 1338.6449 0.64492948 3573 Q8WWI1 LMO7 LIM domain only protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 51.847 51.994 2 2.9191E-05 57753 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 105.98 74.901 120190000 0 0 0 6313400 10178000 10609000 9333800 9052500 8640300 0 14483000 17131000 10505000 8953100 14996000 47780 3573 42877 400675;400676;400677;400678;400679;400680;400681;400682;400683;400684;400685 316093;316094;316095;316096;316097;316098;316099;316100;316101;316102;316103 316099 10 SLTSWTNDQGAR Unmodified 1334.6215 0.62149192 3073 Q7Z2W4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 45.665 45.73 2 2.7685E-05 51177 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 96.342 83.386 21564000 0 0 0 0 3061500 0 4330100 5252000 0 2201100 6719000 0 0 0 0 47781 3073 42878 400686;400687;400688;400689;400690;400691;400692;400693;400694 316104;316105;316106;316107;316108;316109;316110;316111 316107 8 SLTTQVADLK Unmodified 1074.5921 0.59208927 530 O75665 OFD1 Oral-facial-digital syndrome 1 protein yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 53.205 52.774 2 0.017663 68198 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.299 43.807 55516000 0 26600000 0 0 2243500 3200800 2887900 2348900 0 3007100 3833000 4242100 3968400 3183500 0 47782 530 42879 400695;400696;400697;400698;400699;400700;400701;400702;400703;400704 316112;316113;316114;316115;316116;316117 316113 6 SLTTSQYLMHEVAK Unmodified 1606.8025 0.80249275 4762 Q9NZB2 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 72.553 66.181 2;3 7.6186E-24 87118 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 119.45 92.021 192700000 120080000 65540000 7078100 0 0 0 0 0 0 0 0 0 0 0 0 47783 4762 42880 400705;400706;400707;400708 316118;316119;316120 316119 3 SLTYDEVISFVPPPLDQEEMES Oxidation (M) 2540.1516 0.15161736 2611 Q16539 MAPK14 Mitogen-activated protein kinase 14 yes yes 0 1 0 By MS/MS 2 0 1 1 98.327 93.592 2 3.8655E-10 115859 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.728 70.047 25011000 0 25011000 0 0 0 0 0 0 0 0 0 0 0 0 0 47784 2611 42881 400709 316121 316121 4260 1 SLTYDEVISFVPPPLDQEEMES Unmodified 2524.1567 0.15670274 2611 Q16539 MAPK14 Mitogen-activated protein kinase 14 yes yes 0 0 0 By MS/MS 2 0 1 1 99.128 94.393 2 0.014632 116747 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 49.298 30.702 28987000 0 28987000 0 0 0 0 0 0 0 0 0 0 0 0 0 47785 2611 42881 400710 316122 316122 1 SLTYLSILR Unmodified 1064.623 0.62299547 892 P09661 SNRPA1 U2 small nuclear ribonucleoprotein A' yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 83.856 84.029 2 0.019674 97448 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 53.775 37.235 28223000 0 0 0 0 0 0 0 8023500 8142700 0 0 12057000 0 0 0 47786 892 42882 400711;400712;400713 316123;316124 316124 2 SLVALLVETQMK Oxidation (M) 1346.7479 0.74793799 3687;3475 Q8TAQ2;Q92922 SMARCC2;SMARCC1 SWI/SNF complex subunit SMARCC2;SWI/SNF complex subunit SMARCC1 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.86 2.8 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 86.704 85.6 2;3 3.0453E-08 98895 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 122.26 77.097 135720000 33035000 0 0 4113100 4290000 8740100 6849000 6928500 6307600 14068000 9668100 10094000 5300400 8177500 18148000 47787 3475;3687 42883 400714;400715;400716;400717;400718;400719;400720;400721;400722;400723;400724;400725;400726;400727 316125;316126;316127;316128;316129;316130;316131;316132;316133;316134;316135;316136;316137;316138;316139 316127 5003 14 SLVALLVETQMK Unmodified 1330.753 0.75302336 3687;3475 Q8TAQ2;Q92922 SMARCC2;SMARCC1 SWI/SNF complex subunit SMARCC2;SWI/SNF complex subunit SMARCC1 no no 0 0 0 By MS/MS 2 0 1 1 97.677 89.546 2 8.4519E-08 115608 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 131.28 63.721 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47788 3475;3687 42883 400728 316140 316140 1 SLVASLAEPDFVVTDFAK Unmodified 1907.988 0.98804492 1137 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 6.07 3.95 1 4 2 7 1 4 2 1 1 1 1 1 1 1 96.421 95.373 2;3 5.0161E-204 113634 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 249.28 238.62 1660000000 38544000 1393500000 181020000 0 0 0 0 1056100 911640 10045000 7455200 2390400 0 2400300 22742000 47789 1137 42884 400729;400730;400731;400732;400733;400734;400735;400736;400737;400738;400739;400740;400741;400742 316141;316142;316143;316144;316145;316146;316147;316148;316149;316150;316151;316152;316153;316154;316155;316156;316157 316153 17 SLVASSPALK Unmodified 971.56515 0.56514624 3193 Q86XA9 HEATR5A HEAT repeat-containing protein 5A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 44.624 43.499 2 0.0093306 47479 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 57.96 28.622 45030000 20368000 0 0 3403700 4142800 4138000 4450900 0 0 0 0 5246300 0 3280000 0 47790 3193 42885 400743;400744;400745;400746;400747;400748;400749 316158;316159;316160;316161;316162 316161 5 SLVATGNLLDLEETAK Unmodified 1672.8883 0.88833087 2760 Q5SW96 LDLRAP1 Low density lipoprotein receptor adapter protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 84.262 84.315 2 0.0091468 97662 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 37.504 22.824 75405000 0 0 0 2571900 5514000 7749800 6102200 0 4769300 10338000 9548500 8291300 3576200 5440300 11504000 47791 2760 42886 400750;400751;400752;400753;400754;400755;400756;400757;400758;400759;400760 316163;316164;316165;316166;316167;316168 316168 6 SLVDTVYALK Unmodified 1107.6176 0.61757574 2488 Q15052 ARHGEF6 Rho guanine nucleotide exchange factor 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78.445 77.463 2 0.00075957 95829 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.89 80.087 462760000 22463000 186170000 8655700 7861000 10881000 20371000 14251000 14891000 11325000 31526000 27071000 27810000 15811000 22307000 41367000 47792 2488 42887 400761;400762;400763;400764;400765;400766;400767;400768;400769;400770;400771;400772;400773;400774;400775 316169;316170;316171;316172;316173;316174;316175;316176;316177 316171 7 SLVDYENANK Unmodified 1151.5459 0.54586736 5032 Q9UNH7 SNX6 Sorting nexin-6;Sorting nexin-6, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.144 37.324 2 0.0017459 40998 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 88.921 61.783 158590000 0 0 0 8657900 6973200 17342000 9646900 9605100 6054600 19002000 19642000 15499000 14571000 12697000 18902000 47793 5032 42888 400776;400777;400778;400779;400780;400781;400782;400783;400784;400785;400786;400787 316178;316179;316180;316181;316182;316183;316184;316185;316186;316187;316188;316189;316190 316183 12 SLVEIADTVPK Unmodified 1170.6496 0.64960415 149 O00410 IPO5 Importin-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 73.792 72.426 1;2 5.9728E-08 91217 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 166.34 112.37 5814900000 131900000 4056100000 139380000 61082000 67604000 225270000 90427000 74510000 47019000 191810000 129620000 151260000 105270000 128370000 215270000 47794 149 42889 400788;400789;400790;400791;400792;400793;400794;400795;400796;400797;400798;400799;400800;400801;400802;400803;400804 316191;316192;316193;316194;316195;316196;316197;316198;316199;316200;316201;316202;316203;316204;316205;316206;316207;316208;316209;316210;316211;316212;316213 316197 21 SLVENNPR Unmodified 927.47739 0.47739386 3066 Q7RTS9 DYM Dymeclin yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 16.612 16.706 2 0.025549 16428 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 58.604 17.102 10565000 0 0 0 2402600 0 0 0 2626200 0 0 0 0 5536100 0 0 47795 3066 42890 400805;400806;400807 316214 316214 1 SLVESVSSSPNK Unmodified 1232.6248 0.62484596 4374 Q9H2U2 PPA2 Inorganic pyrophosphatase 2, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 35.156 34.376 2 0.00067277 36879 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.143 52.122 32206000 0 12485000 0 2585800 0 0 0 0 0 0 5886700 0 0 2165500 9083700 47796 4374 42891 400808;400809;400810;400811;400812 316215;316216;316217;316218 316216 4 SLVGGLLQSK Unmodified 1000.5917 0.59169534 1707 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.55 68.629 2 0.0040176 78585 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 74.376 51.852 132390000 0 0 0 7091700 8270200 12026000 10667000 7716100 7619200 12978000 14716000 15446000 9353600 9381200 17127000 47797 1707 42892 400813;400814;400815;400816;400817;400818;400819;400820;400821;400822;400823;400824 316219;316220;316221;316222;316223;316224;316225;316226;316227;316228;316229;316230 316220 12 SLVGLGGTK Unmodified 830.48617 0.48616764 79 CON__P35908v2;P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 39.54 39.718 1;2 3.5206E-10 44045 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 184.04 108 + 33358000000 0 0 0 4507200000 1964400000 2473100000 1856700000 3893200000 1926500000 2941700000 3044100000 4281800000 3715000000 1580300000 1174400000 47798 79 42893 400825;400826;400827;400828;400829;400830;400831;400832;400833;400834;400835;400836;400837;400838;400839;400840;400841;400842;400843;400844;400845;400846;400847;400848 316231;316232;316233;316234;316235;316236;316237;316238;316239;316240;316241;316242;316243;316244;316245;316246;316247;316248;316249;316250;316251;316252;316253;316254;316255 316242 18 SLVGPDAATIR Unmodified 1098.6033 0.60332266 3666 Q92817 EVPL Envoplakin yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 52.631 52.388 2 0.0027921 60197 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 66.056 31.803 18390000 0 0 0 12143000 0 0 0 6246900 0 0 0 0 0 0 0 47799 3666 42894 400849;400850 316256;316257 316257 2 SLVGSEGLSK Unmodified 975.52368 0.52367535 3155 Q86UU0 BCL9L B-cell CLL/lymphoma 9-like protein yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 35.895 36.036 2 0.0024343 39872 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 83.647 21.648 258460000 0 0 0 22376000 17916000 0 23621000 20690000 20829000 28742000 24545000 0 22859000 28153000 48731000 47800 3155 42895 400851;400852;400853;400854;400855;400856;400857;400858;400859;400860 316258;316259;316260;316261;316262;316263;316264;316265 316259 8 SLVHDLFQK Unmodified 1085.5869 0.58694431 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 64.441 63.491 2 0.0098768 70517 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.465 41.311 97410000 14435000 0 0 0 0 14661000 16763000 0 14718000 15581000 0 6818400 0 0 14433000 47801 4634 42896 400861;400862;400863;400864;400865;400866;400867 316266;316267;316268;316269 316267 4 SLVIELDK Unmodified 915.5277 0.5276981 3856;3688;2969 Q92925;Q96GM5;Q6STE5 SMARCD2;SMARCD1;SMARCD3 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2;SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1;SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.739 64.828 2 0.021457 73167 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.962 28.412 119840000 0 0 0 4686600 7238100 11826000 7923600 7189200 8634600 12963000 9722400 14275000 10112000 10952000 14319000 47802 3688;3856;2969 42897 400868;400869;400870;400871;400872;400873;400874;400875;400876;400877;400878;400879 316270;316271;316272;316273;316274;316275;316276;316277;316278 316273 9 SLVIPEK Acetyl (Protein N-term) 826.48002 0.48001963 1885 P62269 RPS18 40S ribosomal protein S18 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.64 1.76 1 24 1 2 2 2 2 2 2 2 2 2 2 2 2 67.644 67.936 1;2 0.0062046 75979 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 70.912 18.229 1192500000 227470000 0 0 50545000 62656000 57691000 49558000 53299000 45031000 86507000 97590000 125190000 113740000 98539000 124720000 47803 1885 42898 400880;400881;400882;400883;400884;400885;400886;400887;400888;400889;400890;400891;400892;400893;400894;400895;400896;400897;400898;400899;400900;400901;400902;400903;400904 316279;316280;316281;316282;316283 316279 5 SLVLDTK Unmodified 774.44872 0.4487195 896 P09960 LTA4H Leukotriene A-4 hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 34.525 34.64 2 0.023334 37662 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 90.777 10.837 30803000 0 0 0 5353000 0 0 0 0 0 0 15224000 0 0 10225000 0 47804 896 42899 400905;400906;400907 316284 316284 1 SLVMHTPPVLK Unmodified 1220.6951 0.69511455 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 0 By MS/MS 2 0 1 1 73.619 65.422 3 0.0068626 86584 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.348 38.676 27032000 27032000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47805 1492 42900 400908 316285 316285 1 SLVMHTPPVLK Oxidation (M) 1236.69 0.69002918 1492 P46013 MKI67 Antigen KI-67 yes yes 0 1 0 By MS/MS 2 0 1 1 58.963 50.755 3 0.0035524 69243 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.488 60.153 16961000 16961000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47806 1492 42900 400909 316286 316286 2347 0 SLVNLGGSK Unmodified 873.49198 0.4919813 780 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.63 1.56 1 18 1 2 2 1 2 3 1 1 1 1 2 1 1 41.872 41.714 2 0.0036114 45469 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 109.71 61.866 + 59602000000 0 5394600 0 8090200000 3842500000 3935100000 3747200000 11374000000 2509500000 5522700000 4022400000 7624700000 4389100000 2465600000 2073000000 47807 780 42901 400910;400911;400912;400913;400914;400915;400916;400917;400918;400919;400920;400921;400922;400923;400924;400925;400926;400927;400928 316287;316288;316289;316290;316291;316292;316293;316294;316295;316296;316297;316298;316299;316300;316301;316302;316303;316304;316305;316306;316307;316308;316309;316310;316311;316312;316313;316314;316315;316316;316317;316318;316319;316320;316321;316322;316323;316324;316325 316302 38 SLVPAAELLESR Unmodified 1283.7085 0.70851601 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 2 1 1 1 1 1 1 1 81.994 82.065 2 0.00045337 94856 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 79.693 45.732 153840000 0 0 0 6359400 9319100 13740000 10412000 12171000 9037800 14715000 14351000 19645000 9301000 11218000 23574000 47808 2501 42902 400929;400930;400931;400932;400933;400934;400935;400936;400937;400938;400939;400940;400941 316326;316327;316328;316329;316330;316331;316332;316333;316334;316335;316336 316327 10 SLVPQVSQATGVQLPGK Unmodified 1707.9519 0.95193418 3915 Q96L91 EP400 E1A-binding protein p400 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 77.562 77.667 2 0.00014634 89709 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 94.122 81.762 112420000 0 0 0 0 7156300 9063000 7480900 9169000 6788700 12742000 12173000 14638000 7823800 10096000 15285000 47809 3915 42903 400942;400943;400944;400945;400946;400947;400948;400949;400950;400951;400952 316337;316338;316339;316340;316341;316342;316343;316344;316345;316346;316347 316338 11 SLVPVPNSSSSSSSSNSLVSAAENPPQR Unmodified 2784.3526 0.35259387 3164 Q86V97;Q8WVZ9 KBTBD6;KBTBD7 Kelch repeat and BTB domain-containing protein 6;Kelch repeat and BTB domain-containing protein 7 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 75.949 76.097 3 3.0001E-14 87832 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 53.475 50.433 53612000 0 0 0 0 0 5347400 4230800 7262100 3592800 4894600 9018000 0 4424200 5125400 9716400 47810 3164 42904 400953;400954;400955;400956;400957;400958;400959;400960;400961;400962 316348;316349;316350;316351;316352;316353;316354;316355;316356 316349 9 SLVQEMVGSFGK Oxidation (M) 1296.6384 0.63838754 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 1 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 2 1 2 2 57.967 58.108 2 0.0044098 64957 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.848 44.63 43702000 0 0 0 0 4481700 9816900 5073600 0 0 4931900 6155200 0 8712400 0 4530100 47811 528 42905 400963;400964;400965;400966;400967;400968;400969;400970;400971;400972 316357;316358;316359;316360 316359 692 4 SLVQEMVGSFGK Unmodified 1280.6435 0.64347291 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 83.975 84.122 2 0.0048774 97580 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 67.726 54.147 32692000 0 0 0 0 0 2714100 0 5938600 2067900 0 4232900 3909900 2498700 0 11330000 47812 528 42905 400973;400974;400975;400976;400977;400978;400979;400980 316361;316362;316363;316364 316364 4 SLVQGELVTASK Unmodified 1230.682 0.68196691 1361 P35611 ADD1 Alpha-adducin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.904 53.047 2 5.6712E-08 59688 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 120.09 29.434 574010000 0 0 0 19407000 20573000 45558000 28944000 19291000 42901000 71130000 75375000 64776000 66881000 41039000 78132000 47813 1361 42906 400981;400982;400983;400984;400985;400986;400987;400988;400989;400990;400991;400992 316365;316366;316367;316368;316369;316370;316371;316372;316373;316374;316375;316376 316370 11 SLVQIHEK Unmodified 952.53418 0.53418046 3122 Q7Z7E8 UBE2Q1 Ubiquitin-conjugating enzyme E2 Q1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 27.439 26.239 2 0.012704 37592 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.997 54.304 200540000 84295000 26844000 34792000 0 0 5885800 3503600 5643800 3670600 6500100 6795700 5436400 4782100 0 12390000 47814 3122 42907 400993;400994;400995;400996;400997;400998;400999;401000;401001;401002;401003;401004;401005 316377;316378;316379;316380;316381;316382;316383;316384;316385;316386 316380 10 SLVQIIYDENRK Unmodified 1476.7936 0.79364262 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 2 1 1 1 1 1 1 1 1 1 71.484 71.674 3 0.0088141 83701 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 58.172 0 61441000 0 0 0 0 0 5787400 3273900 4264400 5497900 5150700 5292500 9212200 6396500 4943700 11622000 47815 5262 42908 401006;401007;401008;401009;401010;401011;401012;401013;401014;401015;401016 316387;316388;316389;316390;316391;316392;316393;316394;316395;316396 316388 10 SLVSDIGK Unmodified 817.45453 0.45453316 3572 Q8WWH5 TRUB1 Probable tRNA pseudouridine synthase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 42.084 42.234 2 0.0075386 45773 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.296 41.447 48339000 0 0 0 2841300 3157400 5421600 4667700 0 0 7032100 0 7335100 4908600 4517900 8456800 47816 3572 42909 401017;401018;401019;401020;401021;401022;401023;401024;401025 316397;316398;316399;316400 316399 4 SLVSGLIR Unmodified 843.5178 0.51780212 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.113 68.195 2 0.011473 77694 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.847 2.33 322870000 0 0 0 13970000 17679000 25258000 20691000 21785000 15252000 32891000 30963000 42833000 26560000 29658000 45330000 47817 3641 42910 401026;401027;401028;401029;401030;401031;401032;401033;401034;401035;401036;401037 316401;316402;316403;316404;316405;316406;316407;316408;316409 316407 3 SLVSRQEAK Unmodified 1016.5615 0.56145784 3639 Q92614 MYO18A Unconventional myosin-XVIIIa yes yes 0 0 1 By MS/MS 2 0 1 1 14.291 10.243 2 0.013102 15415 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 117.84 55.838 51748000 51748000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47818 3639 42911 401038 316410 316410 1 SLVSTPAGPVNVLK Unmodified 1380.7977 0.79766537 3999 Q96T58 SPEN Msx2-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 76.46 75.515 2 0.0014282 87459 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 60.434 42.998 147950000 6258600 35511000 0 5852900 9828500 5578200 9304000 8821900 0 11597000 11516000 14730000 10570000 7907500 10471000 47819 3999 42912 401039;401040;401041;401042;401043;401044;401045;401046;401047;401048;401049;401050;401051 316411;316412;316413;316414;316415;316416;316417;316418;316419;316420;316421 316421 11 SLVTEAENSQHQQK Unmodified 1597.7696 0.76961272 935 P11171 EPB41 Protein 4.1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 34.11 30.391 2;3 0.0066732 38564 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 61.353 48.397 17441000 0 6252300 11189000 0 0 0 0 0 0 0 0 0 0 0 0 47820 935 42913 401052;401053;401054 316422;316423;316424 316424 3 SLVVPAYAYR Unmodified 1137.6182 0.61824444 5173 Q9Y3R4 NEU2 Sialidase-2 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 68.581 68.321 2 0.036868 79061 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 41.029 32.76 7576800 0 0 0 6118400 0 0 1458300 0 0 0 0 0 0 0 0 47821 5173 42914 401055;401056 316425 316425 1 SLWGLVSK Acetyl (Protein N-term) 930.51747 0.51746776 1449 P42226 STAT6 Signal transducer and activator of transcription 6 yes yes 1 0 0 By MS/MS 2.5 0.5 1 1 2 94.311 90.259 2 0.0077789 111758 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.665 30.598 33089000 0 33089000 0 0 0 0 0 0 0 0 0 0 0 0 0 47822 1449 42915 401057;401058 316426 316426 1 SLYASSPGGVYATR Unmodified 1427.7045 0.70449327 870 P08670 VIM Vimentin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 2 1 2 1 1 1 1 2 1 1 2 50.604 50.744 2;3 3.9933E-19 57889 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 158.56 141.99 13105000000 0 0 0 785600000 973710000 880690000 1040900000 999330000 819360000 1304400000 1309500000 1477400000 1078100000 1031100000 1404700000 47823 870 42916 401059;401060;401061;401062;401063;401064;401065;401066;401067;401068;401069;401070;401071;401072;401073;401074 316427;316428;316429;316430;316431;316432;316433;316434;316435;316436;316437;316438;316439;316440;316441;316442;316443;316444;316445;316446;316447;316448;316449;316450;316451;316452;316453;316454;316455 316454 28 SLYCQAITTHSK Unmodified 1407.6816 0.68164933 1026 P15822 HIVEP1 Zinc finger protein 40 yes yes 0 0 0 By MS/MS 2 0 1 1 44.879 38.014 3 0.044815 52292 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 22.55 15.185 26091000 26091000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47824 1026 42917 401075 316456 316456 1 SLYDDLGVETSDSK Acetyl (Protein N-term) 1569.7046 0.70461243 3874 Q96I25 RBM17 Splicing factor 45 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.2 3.6 2 8 1 1 1 1 1 1 1 1 1 1 84.039 84.716 2 2.1877E-06 96274 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 101.64 68.265 91297000 7683000 11241000 0 0 6992600 6283600 6848200 0 0 10001000 11323000 0 8738100 8279000 13908000 47825 3874 42918 401076;401077;401078;401079;401080;401081;401082;401083;401084;401085 316457;316458;316459;316460;316461;316462;316463;316464;316465 316463 8 SLYDDVDTGEK Unmodified 1240.5459 0.54592694 4052 Q99715 COL12A1 Collagen alpha-1(XII) chain yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 44.736 39.427 2 0.018047 51088 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.398 36.443 20053000 542920 19510000 0 0 0 0 0 0 0 0 0 0 0 0 0 47826 4052 42919 401086;401087 316466;316467;316468 316467 3 SLYDEVAAQGEVVRK Unmodified 1662.8577 0.85769944 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.31 3.2 5 2 25 3 2 2 2 2 2 3 2 2 2 2 2 2 2 2 65.416 64.512 2;3 3.1821E-65 82774 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 221.55 203.41 1462100000 141600000 178270000 238660000 26782000 28273000 89866000 45850000 50683000 51358000 99839000 100800000 94979000 65364000 87762000 162020000 47827 848 42920 401088;401089;401090;401091;401092;401093;401094;401095;401096;401097;401098;401099;401100;401101;401102;401103;401104;401105;401106;401107;401108;401109;401110;401111;401112;401113;401114;401115;401116;401117;401118;401119 316469;316470;316471;316472;316473;316474;316475;316476;316477;316478;316479;316480;316481;316482;316483;316484;316485;316486;316487;316488;316489;316490;316491;316492;316493;316494;316495;316496;316497 316474 24 SLYDSLIK Unmodified 937.51205 0.51204804 2676 Q3V6T2 CCDC88A Girdin yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 75 70.694 2 0.01335 88648 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.798 39.987 29525000 0 29525000 0 0 0 0 0 0 0 0 0 0 0 0 0 47828 2676 42921 401120;401121 316498 316498 1 SLYEENNK Unmodified 995.45599 0.45598972 3242 Q8IWJ2 GCC2 GRIP and coiled-coil domain-containing protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 15.949 12.575 2 0.028278 16768 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.741 47.934 27327000 0 27327000 0 0 0 0 0 0 0 0 0 0 0 0 0 47829 3242 42922 401122 316499;316500 316500 2 SLYESFVSSSDR Unmodified 1375.6256 0.62557424 1075 P18615 NELFE Negative elongation factor E yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.821 65.906 2 0.00016643 74719 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.355 68.124 102690000 0 0 0 3948400 4228400 7041000 6318600 6459200 6294400 6934100 7598800 15824000 6403700 9816000 21823000 47830 1075 42923 401123;401124;401125;401126;401127;401128;401129;401130;401131;401132;401133;401134 316501;316502;316503;316504;316505;316506;316507;316508;316509;316510;316511;316512 316504 12 SLYGDVDSPLPTGEAGGPPSTR Unmodified 2172.0335 0.033491558 5191 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 74.298 74.263 2 0.00020317 85537 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 55.173 49.996 22106000 0 0 0 3702500 3139100 0 3223000 0 3176900 0 0 4904000 0 3960600 0 47831 5191 42924 401135;401136;401137;401138;401139;401140 316513;316514;316515;316516 316513 4 SLYGLGGSK Unmodified 880.46543 0.46543219 66;58;779 P04259;CON__P02538;P02538;CON__P04259 KRT6B;KRT6A Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 6A no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.069 41.248 2 0.0051431 46929 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 82.279 39.213 + 1665600000 0 0 0 312600000 49217000 41905000 104020000 160390000 42308000 102100000 69001000 83960000 604030000 52876000 43218000 47832 779;58;66 42925 401141;401142;401143;401144;401145;401146;401147;401148;401149;401150;401151;401152 316517;316518;316519;316520;316521;316522;316523;316524;316525;316526;316527;316528;316529 316528 12 SLYGLGGSKR Unmodified 1036.5665 0.56654322 66;58;779 P04259;CON__P02538;P02538;CON__P04259 KRT6B;KRT6A Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 6A no no 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 30.604 30.682 2 0.013421 33331 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 104.2 73.585 + 259960000 0 0 0 24267000 6714600 4299000 41637000 30079000 2116200 0 20424000 0 113260000 17166000 0 47833 779;58;66 42926 401153;401154;401155;401156;401157;401158;401159;401160;401161 316530;316531 316531 2 SLYHDISGDTSGDYRK Unmodified 1812.8279 0.82785588 1643 P50995 ANXA11 Annexin A11 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 2 20 2 1 2 2 1 2 2 2 2 2 2 2 39.773 39.302 3;4 3.8957E-46 55173 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 138.91 134.44 392260000 139430000 0 0 5920800 0 28675000 4281800 6158500 15386000 21181000 17630000 32542000 26314000 21502000 73248000 47834 1643 42927 401162;401163;401164;401165;401166;401167;401168;401169;401170;401171;401172;401173;401174;401175;401176;401177;401178;401179;401180;401181;401182;401183 316532;316533;316534;316535;316536;316537;316538;316539;316540;316541;316542;316543;316544;316545;316546;316547 316538 13 SLYNLGGHK Unmodified 987.51378 0.51377937 96 CON__Q5XKE5;Q5XKE5 KRT79 Keratin, type II cytoskeletal 79 no no 0 0 0 By MS/MS 10 0 1 1 31.866 31.519 2 0.0085925 34609 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 69.176 32.082 + 8769700 0 0 0 8769700 0 0 0 0 0 0 0 0 0 0 0 47835 96 42928 401184 316548 316548 1 SLYNLGGNK Unmodified 964.49779 0.49779495 960 P12035;CON__P12035 KRT3 Keratin, type II cytoskeletal 3 yes no 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 40.19 40.598 2 0.0060392 45292 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 76.134 56.498 + 18442000 0 0 0 0 0 0 7132100 0 0 0 0 11310000 0 0 0 47836 960 42929 401185;401186 316549;316550 316549 2 SLYNLGGSK Unmodified 937.4869 0.48689592 74 CON__P13647;P13647 KRT5 Keratin, type II cytoskeletal 5 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 40.951 41.101 2 0.0036445 46229 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 110.41 63.572 + 2481100000 0 0 0 805700000 186720000 218650000 184810000 0 129470000 302560000 254390000 250680000 0 0 148110000 47837 74 42930 401187;401188;401189;401190;401191;401192;401193;401194;401195 316551;316552;316553;316554;316555;316556;316557;316558;316559;316560;316561;316562;316563 316563 13 SLYNLGGSKR Unmodified 1093.588 0.58800695 74 CON__P13647;P13647 KRT5 Keratin, type II cytoskeletal 5 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.327 31.512 2 0.028146 34322 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 93.649 39.492 + 256660000 0 0 0 33708000 9339800 8011200 9370600 69933000 5385300 13181000 24044000 32085000 36828000 7889400 6882500 47838 74 42931 401196;401197;401198;401199;401200;401201;401202;401203;401204;401205;401206;401207 316564;316565 316565 1 SLYNLGGSR Unmodified 965.49304 0.49304393 103 CON__Q7Z794;Q7Z794 KRT77 Keratin, type II cytoskeletal 1b yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 43.291 43.5 2 0.01033 49491 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 64.485 26.066 + 155140000 0 0 0 42822000 0 0 0 0 0 30066000 29055000 53194000 0 0 0 47839 103 42932 401208;401209;401210;401211 316566;316567;316568 316568 3 SLYPSLEDLK Acetyl (Protein N-term) 1205.618 0.61796967 168 O00560 SDCBP Syntenin-1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.71 3.15 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89.832 90.331 2 0.001141 100910 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 75.378 48.776 182370000 46984000 12776000 0 4906500 7034500 11557000 10653000 8288400 6405200 15226000 10165000 10641000 9956200 9997400 17781000 47840 168 42933 401212;401213;401214;401215;401216;401217;401218;401219;401220;401221;401222;401223;401224;401225 316569;316570;316571;316572;316573;316574;316575;316576;316577;316578;316579;316580;316581;316582;316583 316571 15 SLYPSSEIQLNNK Unmodified 1491.7569 0.75692277 554 O75886 STAM2 Signal transducing adapter molecule 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 1 1 6 2 1 1 1 1 1 1 64.817 62.943 2 7.9176E-06 79749 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.83 109.25 75711000 0 59334000 0 0 0 0 0 0 0 0 0 6467900 3646000 0 6263000 47841 554 42934 401226;401227;401228;401229;401230;401231;401232;401233 316584;316585;316586;316587;316588;316589;316590;316591 316585 8 SLYQSAGVAPESFEYIEAHGTGTK Unmodified 2541.2023 0.2023478 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.68 3.89 7 1 11 2 4 2 1 1 1 1 1 1 1 1 1 1 1 80.612 79.313 2;3 6.2644E-126 99131 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 184.01 160.61 2261800000 110770000 905720000 261410000 0 11789000 126100000 13518000 34971000 40106000 150270000 78286000 110810000 22428000 60974000 334650000 47842 1565 42935 401234;401235;401236;401237;401238;401239;401240;401241;401242;401243;401244;401245;401246;401247;401248;401249;401250;401251;401252 316592;316593;316594;316595;316596;316597;316598;316599;316600;316601;316602;316603;316604;316605;316606;316607;316608;316609;316610;316611;316612;316613;316614 316595 22 SLYRTAEELENEDLK Unmodified 1808.8792 0.87922275 3609 Q92503 SEC14L1 SEC14-like protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 73.48 70.528 3 0.036129 86227 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 44.252 35.91 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47843 3609 42936 401253 316615 316615 1 SLYSMIK Unmodified 840.44153 0.44152563 857 P08133 ANXA6 Annexin A6 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 68.323 61.223 2 0.039422 78400 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.297 28.614 70052000 49684000 20368000 0 0 0 0 0 0 0 0 0 0 0 0 0 47844 857 42937 401254;401255 316616 316616 1 SLYTDESSK Unmodified 1028.4662 0.46622005 4233 Q9BXS6 NUSAP1 Nucleolar and spindle-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 18.035 17.548 2 0.007722 21246 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.02 57.148 135410000 0 100070000 0 0 0 5471900 0 0 4303400 3660800 4486000 4648500 4126700 3765100 4881100 47845 4233 42938 401256;401257;401258;401259;401260;401261;401262;401263;401264;401265 316617;316618;316619;316620;316621 316619 5 SLYTSMARPPLPR Unmodified 1487.7919 0.79186849 2215 Q12965 MYO1E Unconventional myosin-Ie yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 67.215 67.44 3 0.0062734 77309 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 43.991 31.113 55320000 0 0 0 0 0 5088400 3557700 4905200 6056500 0 5520100 10222000 2858700 3809100 13302000 47846 2215 42939 401266;401267;401268;401269;401270;401271;401272;401273;401274 316622;316623;316624;316625;316626;316627 316623 5 SLYVAEYHSEPVEDEKP Unmodified 1990.916 0.91600218 1199 P26196 DDX6 Probable ATP-dependent RNA helicase DDX6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.9 2.69 2 1 18 1 1 1 1 2 1 1 2 2 1 1 1 2 2 2 58.271 57.532 2;3 1.9056E-15 65898 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 131.43 116.56 470660000 24113000 53854000 10692000 12266000 21220000 32178000 24102000 22326000 38591000 28062000 27716000 42960000 30715000 35890000 65979000 47847 1199 42940 401275;401276;401277;401278;401279;401280;401281;401282;401283;401284;401285;401286;401287;401288;401289;401290;401291;401292;401293;401294;401295 316628;316629;316630;316631;316632;316633;316634;316635;316636;316637;316638 316635 11 SLYYNTEK Unmodified 1016.4815 0.48147619 2895 Q6N069 NAA16 N-alpha-acetyltransferase 16, NatA auxiliary subunit yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 27.418 27.532 2 0.0047283 29421 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 129.55 117.12 546030000 0 0 0 12080000 28721000 23480000 36655000 47795000 31843000 79463000 105860000 180140000 0 0 0 47848 2895 42941 401296;401297;401298;401299;401300;401301;401302;401303;401304 316639;316640;316641;316642;316643;316644;316645;316646 316644 6 SLYYYIQQDTK Unmodified 1420.6874 0.68744622 840 P07355;A6NMY6 ANXA2;ANXA2P2 Annexin A2;Putative annexin A2-like protein yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 70.081 68.698 2 2.9703E-60 79509 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 196.79 170.35 2088600000 864270000 679160000 109210000 61427000 14206000 22204000 16572000 36811000 21248000 35777000 40708000 48674000 38660000 28355000 71348000 47849 840 42942 401305;401306;401307;401308;401309;401310;401311;401312;401313;401314;401315;401316;401317;401318;401319;401320;401321 316647;316648;316649;316650;316651;316652;316653;316654;316655;316656;316657;316658;316659;316660;316661;316662;316663;316664;316665;316666;316667;316668 316666 22 SMANPPAAVK Oxidation (M) 1000.5012 0.50116577 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 15.909 16.014 2 0.007709 15452 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 53.775 39.618 93621000 0 0 0 5916500 5653000 11058000 7720200 7149400 6325600 9130100 0 14432000 12543000 13693000 0 47850 2392 42943 401322;401323;401324;401325;401326;401327;401328;401329;401330;401331 316669;316670;316671;316672;316673;316674 316674 3918 6 SMANPPAAVK Unmodified 984.50625 0.50625115 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 27.1 27.345 2 0.0074386 28064 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 62.464 42.761 119550000 0 0 0 0 6690500 13432000 6823800 0 5121900 12372000 14373000 13446000 12225000 12922000 22145000 47851 2392 42943 401332;401333;401334;401335;401336;401337;401338;401339;401340;401341 316675;316676;316677;316678;316679;316680;316681;316682 316681 8 SMAQHLIENSK Oxidation (M) 1272.6132 0.61323542 4258 Q9BZ29 DOCK9 Dedicator of cytokinesis protein 9 yes yes 0 1 0 By MS/MS 2 0 1 1 23.758 18.783 2 0.0099126 26780 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.5 16.15 4944200 4944200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47852 4258 42944 401342 316683 316683 5721 1 SMAQHLIENSK Unmodified 1256.6183 0.6183208 4258 Q9BZ29 DOCK9 Dedicator of cytokinesis protein 9 yes yes 0 0 0 By MS/MS 2 0 1 1 42.61 35.875 3 0.055815 49459 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.164 11.511 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47853 4258 42944 401343 316684 316684 1 SMDATLK Unmodified 764.37384 0.37383999 3062 Q7LBR1 CHMP1B Charged multivesicular body protein 1b yes yes 0 0 0 By MS/MS 2 0 1 1 21.985 18.102 2 0.047355 24092 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.741 26.168 239240000 0 239240000 0 0 0 0 0 0 0 0 0 0 0 0 0 47854 3062 42945 401344 316685 316685 1 SMDEFTASTPADLGEAGR Unmodified 1853.8102 0.8101569 3107 Q7Z5K2 WAPAL Wings apart-like protein homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 71.325 71.384 2 2.4716E-11 82220 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 89.959 76.296 50715000 0 0 0 3823300 2518500 6580800 1973300 4984300 1884600 5755800 5628900 6070000 0 0 11496000 47855 3107 42946 401345;401346;401347;401348;401349;401350;401351;401352;401353;401354 316686;316687;316688;316689;316690;316691;316692;316693;316694;316695 316687 10 SMDEFTASTPADLGEAGR Oxidation (M) 1869.8051 0.80507153 3107 Q7Z5K2 WAPAL Wings apart-like protein homolog yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 62.719 62.868 2 1.6979E-15 71183 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.591 91.128 45600000 0 0 0 0 4601000 0 6963100 0 5971500 0 9256200 0 0 6748900 12059000 47856 3107 42946 401355;401356;401357;401358;401359;401360 316696;316697;316698;316699;316700;316701 316697 4717 6 SMDELNHDFQALALEGR Oxidation (M) 1960.8949 0.89488959 2425 Q14671 PUM1 Pumilio homolog 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 77.603 77.691 3 1.7813E-05 89609 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 69.522 53.028 116800000 0 0 0 0 4268100 0 0 18025000 15156000 20389000 0 0 11238000 13579000 34150000 47857 2425 42947 401361;401362;401363;401364;401365;401366;401367 316702;316703;316704;316705;316706;316707;316708;316709 316705 3980 5 SMDFEEAER Unmodified 1112.4444 0.44443876 324 O43396 TXNL1 Thioredoxin-like protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 38.994 39.735 2 0.034602 43132 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.447 36.418 3665600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3665600 47858 324 42948 401368 316710 316710 1 SMDFEEAERSEPTQALELTEDDIK Oxidation (M) 2798.244 0.2440142 324 O43396 TXNL1 Thioredoxin-like protein 1 yes yes 0 1 1 By MS/MS 2 0 1 1 80.686 78.158 3 2.8118E-07 94815 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 67.864 64.217 4966900 0 0 4966900 0 0 0 0 0 0 0 0 0 0 0 0 47859 324 42949 401369 316711 316711 414 1 SMDGYESYGECVVALK Unmodified 1806.7804 0.78043668 276 O15357 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 yes yes 0 0 0 By MS/MS 2 0 1 1 79.348 74.613 2 0.00070257 93000 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.16 102.5 55734000 0 55734000 0 0 0 0 0 0 0 0 0 0 0 0 0 47860 276 42950 401370 316712 316712 1 SMDHFDDIGPSVVMASPGMMQSGLSR 4 Oxidation (M) 2815.1921 0.19213552 4963 Q9UKF6 CPSF3 Cleavage and polyadenylation specificity factor subunit 3 yes yes 0 4 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 70.244 70.464 3 3.2921E-12 80545 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.922 55.38 42310000 0 0 0 0 0 6351600 0 4328400 0 8021600 9023000 6251900 0 0 8333300 47861 4963 42951 401371;401372;401373;401374;401375;401376 316713;316714;316715;316716;316717;316718;316719 316715 6308;6309;6310;6311 7 SMDQDFGVVK Unmodified 1124.5172 0.51720977 198;197 O14641;P54792;O14640 DVL2;DVL1P1;DVL1 Segment polarity protein dishevelled homolog DVL-2;Putative segment polarity protein dishevelled homolog DVL1P1;Segment polarity protein dishevelled homolog DVL-1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 51.937 52.168 2 0.0027296 57924 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.684 29.786 52368000 0 0 0 0 2864200 6338200 3281000 0 5399200 0 5607900 6564600 5309600 5414600 11589000 47862 198;197 42952 401377;401378;401379;401380;401381;401382;401383;401384;401385 316720;316721;316722;316723;316724;316725;316726 316722 7 SMDQDFGVVK Oxidation (M) 1140.5121 0.51212439 198;197 O14641;P54792;O14640 DVL2;DVL1P1;DVL1 Segment polarity protein dishevelled homolog DVL-2;Putative segment polarity protein dishevelled homolog DVL1P1;Segment polarity protein dishevelled homolog DVL-1 no no 0 1 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 38.869 39.208 2 0.0057464 43640 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 59.35 46.361 37549000 0 0 0 0 0 3886900 4070500 2981300 0 6450600 4028100 3894800 4581200 0 7655800 47863 198;197 42952 401386;401387;401388;401389;401390;401391;401392;401393;401394 316727;316728;316729 316727 267 3 SMDSYLNQSYGMDNHSGGGGGSR Unmodified 2375.9495 0.94952071 2721 Q5BKZ1 ZNF326 DBIRD complex subunit ZNF326 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 55.286 55.642 3 3.1556E-05 62393 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.579 45.56 14157000 0 0 0 0 0 0 0 0 0 0 0 0 3079100 3336000 7742300 47864 2721 42953 401395;401396;401397 316730;316731 316730 2 SMEAEMIQLQEELAAAER 2 Oxidation (M) 2079.9453 0.94527018 1356 P35579 MYH9 Myosin-9 yes yes 0 2 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 16 1 1 1 2 2 1 2 1 2 2 1 78.516 78.588 2;3 5.9194E-38 91089 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 128.22 120.85 347270000 0 0 0 8982600 24658000 23859000 16643000 32657000 12835000 75060000 38705000 63408000 30024000 20442000 0 47865 1356 42954 401398;401399;401400;401401;401402;401403;401404;401405;401406;401407;401408;401409;401410;401411;401412;401413 316732;316733;316734;316735;316736;316737;316738;316739;316740;316741 316739 2094;2095 5 SMEAEMIQLQEELAAAERAK 2 Oxidation (M) 2279.0773 0.077346983 1356 P35579 MYH9 Myosin-9 yes yes 0 2 1 By MS/MS By MS/MS 2.67 0.471 1 2 1 2 80.918 76.985 3 8.6457E-17 92234 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 105.32 91.163 127860000 881740 126980000 0 0 0 0 0 0 0 0 0 0 0 0 0 47866 1356 42955 401414;401415;401416 316742;316743;316744;316745 316744 2094;2095 4 SMEAEMIQLQEELAAAERAK Oxidation (M) 2263.0824 0.082432361 1356 P35579 MYH9 Myosin-9 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2.29 0.452 5 2 1 4 2 88.06 83.895 3 4.2815E-86 102293 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 155.49 150.51 209390000 20745000 160350000 28299000 0 0 0 0 0 0 0 0 0 0 0 0 47867 1356 42955 401417;401418;401419;401420;401421;401422;401423 316746;316747;316748;316749;316750;316751;316752;316753;316754;316755;316756 316751 2094;2095 11 SMEAEMIQLQEELAAAERAK Unmodified 2247.0875 0.087517738 1356 P35579 MYH9 Myosin-9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 3 1 96.83 92.152 3 1.399E-91 115651 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 161.51 152.58 269120000 41086000 225950000 2085300 0 0 0 0 0 0 0 0 0 0 0 0 47868 1356 42955 401424;401425;401426;401427;401428 316757;316758;316759;316760;316761;316762 316759 6 SMEASVDVSAPK Oxidation (M) 1235.5704 0.57036755 3226 Q8IVF2 AHNAK2 Protein AHNAK2 yes no 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.076 32.263 2 0.0011502 35681 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 65.347 52.82 94765000 0 0 0 5858700 3734900 4159200 3973500 3996600 7804800 3845900 12316000 16587000 4582500 3227600 24678000 47869 3226 42956 401429;401430;401431;401432;401433;401434;401435;401436;401437;401438;401439;401440 316763;316764;316765;316766;316767;316768;316769;316770 316770 4843 8 SMEEDPQTSR Oxidation (M) 1194.4823 0.48228082 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.0623 7.1859 2 0.00032622 4633 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 134.77 126.83 225770000 0 0 0 11657000 11868000 19194000 11433000 12086000 15515000 20724000 28219000 19422000 22867000 20423000 32365000 47870 1986 42957 401441;401442;401443;401444;401445;401446;401447;401448;401449;401450;401451;401452 316771;316772;316773;316774;316775;316776;316777;316778;316779;316780;316781;316782 316774 3237 12 SMEEDPQTSR Unmodified 1178.4874 0.4873662 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.452 13.611 2 0.0033461 12236 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.827 64.542 307620000 0 0 0 13532000 13807000 24084000 8839600 16805000 12045000 26501000 28731000 42620000 28919000 28457000 63281000 47871 1986 42957 401453;401454;401455;401456;401457;401458;401459;401460;401461;401462;401463;401464 316783;316784;316785;316786;316787;316788;316789;316790;316791;316792;316793;316794 316786 12 SMEEDPQTSREIFNFVLK Oxidation (M) 2185.0361 0.036134095 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 1 1 By MS/MS 2 0 1 1 91.439 86.528 3 0.00019072 107513 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.107 57.485 42212000 0 42212000 0 0 0 0 0 0 0 0 0 0 0 0 0 47872 1986 42958 401465 316795 316795 3237 1 SMEEDPQTSREIFNFVLK Unmodified 2169.0412 0.041219473 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 93.461 86.948 3 0.0071369 110357 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 38.777 35.116 37061000 12058000 25003000 0 0 0 0 0 0 0 0 0 0 0 0 0 47873 1986 42958 401466;401467 316796;316797;316798 316798 3 SMEEQLLVVER Oxidation (M) 1347.6704 0.67041595 1970 P78316 NOP14 Nucleolar protein 14 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 2 1 1 1 1 1 1 1 1 1 1 60.712 60.743 2 0.0001059 69775 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 108.67 74.135 69520000 0 0 0 5101700 4599200 5908600 6016800 5150300 4870100 6655300 8113500 10804000 0 4252400 8047900 47874 1970 42959 401468;401469;401470;401471;401472;401473;401474;401475;401476;401477;401478;401479 316799;316800;316801;316802;316803;316804;316805;316806;316807;316808;316809 316809 3161 11 SMEEQLLVVER Unmodified 1331.6755 0.67550132 1970 P78316 NOP14 Nucleolar protein 14 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 72.947 73.129 2 0.0027921 84343 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.056 41.967 31723000 0 0 0 0 0 6919300 0 3821100 2732100 5328800 0 6111300 0 0 6810300 47875 1970 42959 401480;401481;401482;401483;401484;401485 316810;316811;316812;316813 316810 4 SMEFAPSEGAGTQDAAK Oxidation (M) 1711.7359 0.73592933 1406;2357 P39880;Q13948 CUX1 Homeobox protein cut-like 1;Protein CASP no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.528 34.712 2 3.2073E-19 37595 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 103.88 101.15 86771000 0 0 0 5524100 4314900 7684800 5880200 5080900 5612800 7402500 9795700 10074000 9064900 6120300 10216000 47876 1406;2357 42960 401486;401487;401488;401489;401490;401491;401492;401493;401494;401495;401496;401497 316814;316815;316816;316817;316818;316819;316820;316821;316822;316823;316824;316825 316823 2196 12 SMEFAPSEGAGTQDAAK Unmodified 1695.741 0.74101471 1406;2357 P39880;Q13948 CUX1 Homeobox protein cut-like 1;Protein CASP no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 47.243 46.979 2 1.3362E-13 51886 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.959 84.272 165970000 0 36371000 0 0 5638300 7508200 7893800 7723800 7134300 12909000 17958000 15251000 16017000 9468600 22092000 47877 1406;2357 42960 401498;401499;401500;401501;401502;401503;401504;401505;401506;401507;401508;401509 316826;316827;316828;316829;316830;316831;316832;316833;316834;316835;316836;316837 316830 12 SMEIEVLVDADPVVDSSQK Oxidation (M) 2075.9933 0.99326623 120 O00154 ACOT7 Cytosolic acyl coenzyme A thioester hydrolase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.55 3.8 3 2 6 2 2 1 1 1 1 1 1 1 83.547 81.549 2 7.542E-47 95319 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 127.76 112.37 146010000 30197000 78651000 0 1027500 4567300 3852800 0 0 0 11383000 9835300 6491500 0 0 0 47878 120 42961 401510;401511;401512;401513;401514;401515;401516;401517;401518;401519;401520 316838;316839;316840;316841;316842;316843;316844;316845;316846;316847;316848;316849 316845 159 11 SMEIEVLVDADPVVDSSQK Unmodified 2059.9984 0.99835161 120 O00154 ACOT7 Cytosolic acyl coenzyme A thioester hydrolase yes yes 0 0 0 By MS/MS 2 0 1 1 92.764 84.634 2 1.7362E-41 109656 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 166.38 152.42 17264000 17264000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47879 120 42961 401521 316850 316850 1 SMENYYQESGR Unmodified 1362.551 0.55102909 1496 P46063 RECQL ATP-dependent DNA helicase Q1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 34.002 33.812 2 0.00056769 36222 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.087 86.808 96586000 0 7321800 0 0 3209200 3742000 3479700 9657800 2563100 5945300 13449000 13508000 6254900 8981500 18474000 47880 1496 42962 401522;401523;401524;401525;401526;401527;401528;401529;401530;401531;401532;401533 316851;316852;316853;316854;316855;316856;316857;316858;316859;316860 316856 10 SMENYYQESGR Oxidation (M) 1378.5459 0.54594371 1496 P46063 RECQL ATP-dependent DNA helicase Q1 yes yes 0 1 0 By MS/MS 10 0 1 1 21.168 21.679 2 0.011957 22214 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 59.426 54.461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47881 1496 42962 401534 316861 316861 2365 1 SMENYYQESGRAGRDDMK Unmodified 2135.9001 0.90005132 1496 P46063 RECQL ATP-dependent DNA helicase Q1 yes yes 0 0 2 By MS/MS 2 0 1 1 42.346 35.61 3 0.031533 49105 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.52 26.047 8305300 8305300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47882 1496 42963 401535 316862 316862 1 SMEQVCGGDK Unmodified 1109.4481 0.44814392 3456 Q8NHH9 ATL2 Atlastin-2 yes yes 0 0 0 By MS/MS 2 0 1 1 15.331 11.99 2 0.031373 16019 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.433 51.283 8386100 0 8386100 0 0 0 0 0 0 0 0 0 0 0 0 0 47883 3456 42964 401536 316863 316863 1 SMESIEIDQK Oxidation (M) 1194.5438 0.54381845 206 O14733 MAP2K7 Dual specificity mitogen-activated protein kinase kinase 7 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.849 32.041 2 0.00042867 34354 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 122.13 70.28 129440000 0 0 0 11543000 11917000 11036000 12300000 13445000 0 14578000 12750000 15188000 11749000 6375400 8560900 47884 206 42965 401537;401538;401539;401540;401541;401542;401543;401544;401545;401546;401547;401548 316864;316865;316866;316867;316868;316869;316870;316871;316872;316873;316874;316875;316876;316877;316878;316879 316876 275 16 SMESIEIDQK Unmodified 1178.5489 0.54890383 206 O14733 MAP2K7 Dual specificity mitogen-activated protein kinase kinase 7 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 44.099 44.846 2 0.0065358 49788 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.654 39.08 27215000 0 0 0 0 0 0 0 0 0 0 0 10269000 0 0 16946000 47885 206 42965 401549;401550 316880;316881 316881 2 SMESVMVK Unmodified 909.42997 0.42997466 1179 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 0 0 0 By MS/MS 2 0 1 1 41.993 36.898 2 0.031271 48001 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.189 48.227 52907000 0 52907000 0 0 0 0 0 0 0 0 0 0 0 0 0 47886 1179 42966 401551 316882 316882 1 SMEVSTQLAR Oxidation (M) 1136.5496 0.54957253 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 7 1 1 1 1 1 1 1 28.162 28.288 2 0.002231 30478 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 76.679 24.197 48430000 0 0 0 0 4973200 0 7277500 4637900 4478300 9731100 10956000 0 0 6376500 0 47887 5071 42967 401552;401553;401554;401555;401556;401557;401558 316883;316884 316883 6448 2 SMEVSTQLAR Unmodified 1120.5547 0.55465791 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 42.697 42.907 2 0.0044278 47926 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 72.879 35.068 77037000 0 0 0 0 4253300 0 4409900 0 4546900 9290500 13511000 0 9386500 10729000 20910000 47888 5071 42967 401559;401560;401561;401562;401563;401564;401565;401566 316885;316886;316887;316888;316889 316885 2 SMFAGVPTMR 2 Oxidation (M) 1127.5104 0.51035025 268 O15260 SURF4 Surfeit locus protein 4 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By matching By matching 10 0 5 1 1 1 1 1 40.891 40.94 2 0.0066432 46108 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 47.198 14.357 41640000 0 0 0 7084300 6385100 7742200 0 0 0 0 9065300 11363000 0 0 0 47889 268 42968 401567;401568;401569;401570;401571 316890;316891;316892 316891 354;355 3 SMFAGVPTMR Unmodified 1095.5205 0.52052101 268 O15260 SURF4 Surfeit locus protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.139 71.213 2 0.0095404 82738 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 57.59 35.459 74611000 0 0 0 3018200 3478100 5311100 3507400 7228900 3461700 7162800 7943600 8492800 4723000 5323500 14960000 47890 268 42968 401572;401573;401574;401575;401576;401577;401578;401579;401580;401581;401582;401583 316893;316894;316895;316896;316897;316898 316898 6 SMFAGVPTMRESSPK Unmodified 1623.7749 0.77489779 268 O15260 SURF4 Surfeit locus protein 4 yes yes 0 0 1 By MS/MS 2 0 1 1 72.423 64.184 3 0.029136 85234 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 33.44 28.299 13423000 13423000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47891 268 42969 401584 316899 316899 1 SMFGSLDPPNMPQALPK Unmodified 1828.8852 0.88517652 4024 Q99570 PIK3R4 Phosphoinositide 3-kinase regulatory subunit 4 yes yes 0 0 0 By MS/MS 2 0 1 1 90.876 85.98 2 1.5728E-13 106833 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.64 100.15 34560000 0 34560000 0 0 0 0 0 0 0 0 0 0 0 0 0 47892 4024 42970 401585 316900 316900 1 SMFIACAGK Unmodified 983.45686 0.45685812 895 P09884 POLA1 DNA polymerase alpha catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 54.207 47.256 2 0.035925 64156 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.21 49.435 28904000 18331000 10573000 0 0 0 0 0 0 0 0 0 0 0 0 0 47893 895 42971 401586;401587 316901;316902 316901 2 SMFSDQVLAHPSVK Unmodified 1544.7657 0.76571331 4834 Q9UBB9 TFIP11 Tuftelin-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 72.98 67.128 3 0.00024761 88632 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.044 54.015 53014000 50781000 0 2233900 0 0 0 0 0 0 0 0 0 0 0 0 47894 4834 42972 401588;401589 316903 316903 1 SMGETESGDAFLDLK Oxidation (M) 1614.7083 0.70831759 4596 Q9NRA8 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 70.408 70.47 2 2.1196E-10 81364 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 96.64 89.512 16293000 0 0 0 1308900 0 0 0 0 0 0 3742000 3951600 4039400 3251300 0 47895 4596 42973 401590;401591;401592;401593;401594;401595;401596 316904;316905;316906;316907;316908;316909 316907 6001 6 SMGFIGHYLDQK Oxidation (M) 1410.6602 0.66018561 1714 P53396 ACLY ATP-citrate synthase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 28 2 2 2 4 4 4 2 2 2 1 1 2 59.904 60.015 2;3 6.6053E-26 67951 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 175.33 145.07 2338600000 0 0 0 38437000 54190000 81414000 546780000 632680000 699650000 56070000 68514000 122590000 3031600 5418000 29823000 47896 1714 42974 401597;401598;401599;401600;401601;401602;401603;401604;401605;401606;401607;401608;401609;401610;401611;401612;401613;401614;401615;401616;401617;401618;401619;401620;401621;401622;401623;401624 316910;316911;316912;316913;316914;316915;316916;316917;316918;316919;316920;316921;316922;316923;316924;316925;316926;316927;316928;316929;316930;316931;316932;316933;316934;316935;316936 316931 2787 19 SMGFIGHYLDQK Unmodified 1394.6653 0.66527099 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 2 2 1 1 2 2 73.167 73.317 2;3 1.5826E-05 84080 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 82.543 78.186 291580000 0 0 0 1459200 0 21849000 16385000 94024000 78410000 8410800 9202300 36205000 0 0 25639000 47897 1714 42974 401625;401626;401627;401628;401629;401630;401631;401632;401633;401634;401635;401636;401637 316937;316938;316939;316940;316941;316942;316943;316944;316945 316941 7 SMGLPTSDEQK Oxidation (M) 1207.5391 0.53906742 5087 Q9Y266 NUDC Nuclear migration protein nudC yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.36 2.17 2 23 2 2 2 2 2 2 2 2 2 1 2 2 2 21.215 21.402 2 2.3787E-05 21567 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 117.31 109.13 442280000 0 0 0 26082000 17308000 61212000 42067000 17442000 25415000 50070000 48243000 27740000 35495000 34765000 56447000 47898 5087 42975 401638;401639;401640;401641;401642;401643;401644;401645;401646;401647;401648;401649;401650;401651;401652;401653;401654;401655;401656;401657;401658;401659;401660;401661;401662 316946;316947;316948;316949;316950;316951;316952;316953;316954;316955;316956;316957;316958;316959;316960;316961;316962;316963;316964 316955 6485 13 SMGLPTSDEQK Unmodified 1191.5442 0.5441528 5087 Q9Y266 NUDC Nuclear migration protein nudC yes yes 0 0 0 By MS/MS 2 0 1 1 39.235 34.224 2 0.021481 44560 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.165 57.389 741280000 0 741280000 0 0 0 0 0 0 0 0 0 0 0 0 0 47899 5087 42975 401663 316965 316965 1 SMGMEDAFNK 2 Oxidation (M) 1160.4478 0.44780957 799 P05120 SERPINB2 Plasminogen activator inhibitor 2 yes yes 0 2 0 By MS/MS By matching 10 0 2 1 1 16.994 17.155 2 0.034688 17201 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 40.002 29.534 2923800 0 0 0 0 0 0 0 2245400 678350 0 0 0 0 0 0 47900 799 42976 401664;401665 316966 316966 0 SMGSQEDDSGNKPSSYS Oxidation (M) 1790.6901 0.69010135 5042 Q9UNS2 COPS3 COP9 signalosome complex subunit 3 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.27 3.47 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 25.187 25.451 2 1.6298E-275 99349 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 273.08 273.08 109500000 29408000 37504000 0 2271700 3079500 4419800 3448400 2297900 2180500 4384500 3270300 5250000 4725700 3280100 3981600 47901 5042 42977 401666;401667;401668;401669;401670;401671;401672;401673;401674;401675;401676;401677;401678;401679;401680 316967;316968;316969;316970 316970 6392 4 SMGSQEDDSGNKPSSYS Unmodified 1774.6952 0.69518673 5042 Q9UNS2 COPS3 COP9 signalosome complex subunit 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19.889 19.448 2 1.33E-24 20154 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 111.12 111.12 122450000 4206300 8114300 0 4917400 3815400 8952000 7217900 5871300 4236100 8948900 15826000 9863400 7597000 9902400 22978000 47902 5042 42977 401681;401682;401683;401684;401685;401686;401687;401688;401689;401690;401691;401692;401693;401694 316971;316972;316973;316974;316975;316976;316977;316978;316979;316980;316981 316972 11 SMGTGDTPGLEVPSSPLRK Unmodified 1927.9673 0.96732625 3182 Q86WB0 ZC3HC1 Nuclear-interacting partner of ALK yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 66.871 67.008 3 0.001426 76141 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.207 30.196 76942000 0 0 0 2563100 0 6564000 3050600 4544200 3272700 7523800 15188000 7756700 3131300 6403100 16945000 47903 3182 42978 401695;401696;401697;401698;401699;401700;401701;401702;401703;401704;401705 316982;316983;316984;316985;316986 316985 5 SMGTGDTPGLEVPSSPLRK Oxidation (M) 1943.9622 0.96224087 3182 Q86WB0 ZC3HC1 Nuclear-interacting partner of ALK yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 61.45 61.329 3 3.1185E-05 70119 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 65.175 60.954 83644000 0 0 0 9995200 7133700 18613000 0 14311000 14245000 19346000 0 0 0 0 0 47904 3182 42978 401706;401707;401708;401709;401710;401711 316987;316988 316988 4809 0 SMIAAAGYQHIR Unmodified 1316.6659 0.66593969 4184 Q9BVC4 MLST8 Target of rapamycin complex subunit LST8 yes yes 0 0 0 By MS/MS 10 0 1 1 46.345 46.399 3 0.024342 52351 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 38.238 29.438 3554300 0 0 0 0 0 3554300 0 0 0 0 0 0 0 0 0 47905 4184 42979 401712 316989 316989 1 SMIEISR Oxidation (M) 850.42185 0.42185282 1570 P49368 CCT3 T-complex protein 1 subunit gamma yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 2 2 2 1 1 1 2 2 2 2 25.837 26.018 2 0.012628 28295 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 110.61 43.577 1144600000 0 0 0 72596000 46988000 81824000 133440000 60816000 57955000 71901000 151240000 206020000 132740000 129120000 0 47906 1570 42980 401713;401714;401715;401716;401717;401718;401719;401720;401721;401722;401723;401724;401725;401726;401727;401728;401729;401730 316990;316991;316992;316993;316994;316995;316996;316997;316998;316999;317000;317001 316993 2520 12 SMIEISR Unmodified 834.42694 0.4269382 1570 P49368 CCT3 T-complex protein 1 subunit gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.74 41.917 2 0.01917 45728 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 110.61 31.158 1346000000 0 0 0 66125000 62811000 107330000 68946000 90265000 54174000 126180000 149180000 164480000 109880000 111620000 234980000 47907 1570 42980 401731;401732;401733;401734;401735;401736;401737;401738;401739;401740;401741;401742 317002;317003;317004;317005;317006;317007;317008;317009;317010;317011;317012;317013 317010 11 SMIEQLIK Unmodified 960.5314 0.53140327 2828 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 74.821 73.566 2 0.012119 93542 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.6 76.969 658840000 311890000 309380000 0 1508800 824810 1592900 0 4482600 0 0 6914300 6340500 0 5475800 10434000 47908 2828 42981 401743;401744;401745;401746;401747;401748;401749;401750;401751;401752 317014;317015;317016 317014 3 SMIEQLIK Oxidation (M) 976.52632 0.52631789 2828 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 60.028 54.049 2 0.015502 73537 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.698 59.194 180720000 48878000 90879000 40968000 0 0 0 0 0 0 0 0 0 0 0 0 47909 2828 42981 401753;401754;401755 317017;317018 317017 4471 2 SMIMFGSQENK 2 Oxidation (M) 1302.5584 0.55842266 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 2 0 By MS/MS By MS/MS 2 0 2 1 1 36.951 32.036 2 0.023547 44602 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.982 38.779 11518000 0 11518000 0 0 0 0 0 0 0 0 0 0 0 0 0 47910 619 42982 401756;401757 317019;317020 317020 757 2 SMIMFGSQENK Oxidation (M) 1286.5635 0.56350803 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 1 0 By MS/MS 2 0 2 2 50.494 44.926 2 9.1666E-07 52412 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.86 93.177 26563000 0 26563000 0 0 0 0 0 0 0 0 0 0 0 0 0 47911 619 42982 401758;401759 317021;317022;317023 317021 757 3 SMIMFGSQENK Unmodified 1270.5686 0.56859341 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 65.873 58.767 2 0.034893 75304 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.335 48.559 37123000 13011000 24112000 0 0 0 0 0 0 0 0 0 0 0 0 0 47912 619 42982 401760;401761 317024;317025 317024 2 SMLAALIAAQATALNR Oxidation (M) 1629.8872 0.88722543 3276 Q8IY67 RAVER1 Ribonucleoprotein PTB-binding 1 yes yes 0 1 0 By MS/MS 10 0 1 1 88.708 88.852 2 0.026959 102840 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.031 22.716 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47913 3276 42983 401762 317026 317026 1 SMLEVNYPMENGIVR Oxidation (M) 1766.8331 0.83314095 1836 P61160 ACTR2 Actin-related protein 2 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 17 1 2 1 1 1 1 2 2 2 1 1 2 76.386 76.458 2 2.7741E-42 88227 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 164.04 139.69 109180000 0 0 0 2027800 6705500 4157200 3054900 3593400 3778900 14303000 16456000 16158000 3674800 4437000 30834000 47914 1836 42984 401763;401764;401765;401766;401767;401768;401769;401770;401771;401772;401773;401774;401775;401776;401777;401778;401779 317027;317028;317029;317030;317031;317032;317033;317034;317035;317036;317037;317038;317039;317040 317032 2979;2980 14 SMLEVNYPMENGIVR 2 Oxidation (M) 1782.8281 0.82805557 1836 P61160 ACTR2 Actin-related protein 2 yes yes 0 2 0 By MS/MS 10 0 1 1 68.282 68.411 2 4.7605E-06 78641 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 78.653 64.747 8383300 0 0 0 0 0 0 0 0 0 0 0 0 8383300 0 0 47915 1836 42984 401780 317041 317041 2979;2980 1 SMLLLAPK Oxidation (M) 887.51502 0.51502492 3907 Q96KG9 SCYL1 N-terminal kinase-like protein yes yes 0 1 0 By MS/MS By MS/MS 2.67 0.471 1 2 1 2 57.686 52.353 2 0.038386 67330 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.915 46.784 55098000 1736200 53361000 0 0 0 0 0 0 0 0 0 0 0 0 0 47916 3907 42985 401781;401782;401783 317042 317042 1 SMLLLAPK Unmodified 871.52011 0.5201103 3907 Q96KG9 SCYL1 N-terminal kinase-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 75.651 70.3 2 0.024424 88971 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.297 49.18 277500000 180470000 75728000 21308000 0 0 0 0 0 0 0 0 0 0 0 0 47917 3907 42985 401784;401785;401786 317043;317044 317043 2 SMLLSAIGK Oxidation (M) 934.51575 0.5157532 4879 Q9UG63 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.67 1.6 1 23 1 2 2 2 2 2 2 2 1 2 2 2 2 54.94 54.714 2 0.0055125 62776 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 69.825 26.578 655130000 39148000 0 0 53107000 42807000 55366000 63457000 51366000 43491000 58206000 35870000 56085000 57135000 47429000 51661000 47918 4879 42986 401787;401788;401789;401790;401791;401792;401793;401794;401795;401796;401797;401798;401799;401800;401801;401802;401803;401804;401805;401806;401807;401808;401809;401810 317045;317046;317047;317048;317049;317050;317051;317052;317053;317054;317055;317056;317057;317058;317059 317059 6233 13 SMLLSAIGK Unmodified 918.52084 0.52083858 4879 Q9UG63 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 69.836 69.283 2 0.011889 91741 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.568 18.892 400590000 95092000 0 0 9596800 12161000 25465000 15706000 22877000 17610000 26268000 35142000 29769000 20923000 28206000 61771000 47919 4879 42986 401811;401812;401813;401814;401815;401816;401817;401818;401819;401820;401821;401822;401823 317060;317061;317062;317063;317064;317065 317063 6 SMLQATAEANNLAAAASAK Oxidation (M) 1847.9047 0.90472599 2869 Q6DD88 ATL3 Atlastin-3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 8.83 2.61 1 5 1 1 1 1 1 1 64.142 63.41 2 4.1237E-07 76487 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 92.457 83.35 24014000 0 4585000 0 0 4151000 0 2906900 0 0 4668500 4987100 0 0 2715700 0 47920 2869 42987 401824;401825;401826;401827;401828;401829 317066;317067;317068;317069 317067 4517 4 SMLQATAEANNLAAAASAK Unmodified 1831.9098 0.90981137 2869 Q6DD88 ATL3 Atlastin-3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 6.25 3.77 2 2 4 4 1 1 1 1 76.226 74.2 2;3 1.3341E-64 92012 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 177.63 158.07 227140000 0 177210000 0 0 3671300 0 5856100 0 0 14788000 0 0 0 0 25618000 47921 2869 42987 401830;401831;401832;401833;401834;401835;401836;401837 317070;317071;317072;317073 317071 4 SMMNLQTK 2 Oxidation (M) 983.4416 0.44160198 945 P11387 TOP1 DNA topoisomerase 1 yes yes 0 2 0 By MS/MS By MS/MS By matching By matching 8 3.46 1 3 1 1 1 1 6.7215 6.8984 2 0.042818 5288 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 47.849 26.548 2191900 0 0 0 0 0 0 1032000 0 0 482740 677140 0 0 0 0 47922 945 42988 401838;401839;401840;401841 317074;317075 317074 1 SMMNLQTK Oxidation (M) 967.44669 0.44668736 945 P11387 TOP1 DNA topoisomerase 1 yes yes 0 1 0 By MS/MS 2 0 1 1 22.211 18.328 2 0.028075 24196 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.301 56.453 17231000 0 17231000 0 0 0 0 0 0 0 0 0 0 0 0 0 47923 945 42988 401842 317076 317076 1 SMMNLQTK Unmodified 951.45177 0.45177274 945 P11387 TOP1 DNA topoisomerase 1 yes yes 0 0 0 By MS/MS 2 0 1 1 39.409 34.398 2 0.01467 44805 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.352 50.631 26171000 0 26171000 0 0 0 0 0 0 0 0 0 0 0 0 0 47924 945 42988 401843 317077 317077 1 SMMQDREDQSILCTGESGAGK 2 Oxidation (M) 2330.9777 0.97770929 1356 P35579 MYH9 Myosin-9 yes yes 0 2 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.987 39.167 3 5.9235E-54 43086 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 122.53 122.38 1664600000 0 0 0 115560000 147800000 128090000 153840000 86832000 136790000 147750000 137790000 223920000 152020000 106620000 127570000 47925 1356 42989 401844;401845;401846;401847;401848;401849;401850;401851;401852;401853;401854;401855 317078;317079;317080;317081;317082;317083;317084;317085;317086;317087;317088;317089;317090;317091 317084 2096;2097 14 SMMQDREDQSILCTGESGAGK Oxidation (M) 2314.9828 0.98279467 1356 P35579 MYH9 Myosin-9 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 44.412 44.584 3 6.3436E-73 50360 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 157.28 154.94 1247000000 0 0 0 66231000 102440000 124220000 90832000 87305000 86402000 107460000 135550000 151520000 110520000 87840000 96649000 47926 1356 42989 401856;401857;401858;401859;401860;401861;401862;401863;401864;401865;401866;401867;401868;401869;401870;401871;401872;401873;401874;401875;401876;401877;401878;401879 317092;317093;317094;317095;317096;317097;317098;317099;317100;317101;317102;317103;317104;317105;317106;317107;317108;317109;317110;317111;317112;317113;317114;317115;317116;317117;317118;317119;317120;317121;317122;317123;317124;317125;317126;317127;317128;317129 317093 2096;2097 38 SMMQDREDQSILCTGESGAGK Unmodified 2298.9879 0.98788005 1356 P35579 MYH9 Myosin-9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 2 1 2 2 1 1 2 2 1 1 2 53.266 53.437 2;3 1.4682E-109 60253 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 178.77 177.67 1029500000 0 0 0 37035000 44756000 58258000 56719000 83693000 46012000 59657000 137920000 120150000 71530000 85929000 227860000 47927 1356 42989 401880;401881;401882;401883;401884;401885;401886;401887;401888;401889;401890;401891;401892;401893;401894;401895;401896;401897 317130;317131;317132;317133;317134;317135;317136;317137;317138;317139;317140;317141;317142;317143;317144;317145;317146;317147;317148;317149;317150;317151;317152;317153;317154;317155;317156 317142 27 SMNANTITK Oxidation (M) 994.47534 0.47534495 312 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 7.8697 7.962 2 0.032995 6420 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 42.109 16.372 17905000 0 0 0 0 2232600 0 2717800 0 0 3455800 0 5487900 4010500 0 0 47928 312 42990 401898;401899;401900;401901;401902 317157 317157 1 SMNSALGK Oxidation (M) 822.39055 0.39055269 2244 Q13155 AIMP2 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 8 1 1 1 1 1 1 1 1 5.802 5.9677 2 0.015163 3881 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.682 43.718 33191000 0 0 0 1829000 0 0 0 2702300 0 4966300 4328500 4304300 4074800 3895900 7089500 47929 2244 42991 401903;401904;401905;401906;401907;401908;401909;401910 317158;317159;317160;317161 317161 3647 4 SMNSQYLK Oxidation (M) 985.45388 0.45388123 925 P10619 CTSA Lysosomal protective protein;Lysosomal protective protein 32 kDa chain;Lysosomal protective protein 20 kDa chain yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 15.772 15.857 2 0.034618 15568 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 46.016 27.21 22926000 0 0 0 12498000 2994300 0 0 0 0 2595300 4839100 0 0 0 0 47930 925 42992 401911;401912;401913;401914 317162 317162 1 SMPDAMPLPGVGEELK Acetyl (Protein N-term);2 Oxidation (M) 1743.8059 0.80592315 377 O43865 AHCYL1 Putative adenosylhomocysteinase 2 yes yes 1 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.25 2.49 1 11 1 1 1 1 1 1 1 1 1 1 1 1 79.834 80.315 2 2.7612E-20 90107 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 107.39 98.065 125620000 6780500 0 0 8304100 9688300 10752000 11911000 0 8262300 10455000 13448000 17793000 10083000 7721700 10422000 47931 377 42993 401915;401916;401917;401918;401919;401920;401921;401922;401923;401924;401925;401926 317163;317164;317165;317166;317167;317168;317169;317170;317171;317172;317173;317174 317171 482;483 12 SMPDAMPLPGVGEELK Acetyl (Protein N-term) 1711.8161 0.81609391 377 O43865 AHCYL1 Putative adenosylhomocysteinase 2 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.2 3.6 1 4 1 1 1 1 1 94.748 96.179 2 2.3851E-07 91006 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 119.01 96.541 61477000 42940000 0 0 0 0 0 0 0 0 3468300 3873100 0 0 0 11195000 47932 377 42993 401927;401928;401929;401930;401931 317175;317176;317177;317178;317179;317180 317177 6 SMPDAMPLPGVGEELK Acetyl (Protein N-term);Oxidation (M) 1727.811 0.81100853 377 O43865 AHCYL1 Putative adenosylhomocysteinase 2 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 7.55 4.01 3 8 1 2 1 1 2 1 2 1 91.163 91.915 2 1.4619E-05 98665 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 74.611 55.368 82299000 14354000 23884000 0 1717300 0 0 0 0 0 0 16033000 0 4751300 10253000 11306000 47933 377 42993 401932;401933;401934;401935;401936;401937;401938;401939;401940;401941;401942 317181;317182;317183;317184;317185;317186;317187 317186 482;483 7 SMPEQTGEK Unmodified 1005.4437 0.44371047 1924 P62888 RPL30 60S ribosomal protein L30 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 8.8129 8.9834 2 0.0099526 6361 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 65.246 53.606 59408000 0 0 0 0 0 5050700 5358700 5447300 3406200 0 14431000 9556500 8928000 7229200 0 47934 1924 42994 401943;401944;401945;401946;401947;401948;401949;401950 317188;317189 317188 2 SMPHQEILAADEVLQESEMR 2 Oxidation (M) 2344.0675 0.067510578 5074 Q9UQR1 ZNF148 Zinc finger protein 148 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 75.651 75.865 3 1.2423E-09 87541 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 74.776 69.775 60206000 0 0 0 0 0 0 0 0 0 14654000 12007000 10231000 0 0 23314000 47935 5074 42995 401951;401952;401953;401954;401955 317190;317191;317192;317193;317194 317194 6457;6458 5 SMPIRKDDEVQVVR Oxidation (M) 1686.8723 0.87230365 1843 P61254;Q9UNX3 RPL26;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 yes no 0 1 2 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 17 1 1 1 2 1 2 1 2 2 1 2 1 28.158 28.393 3;4 0.0056647 29558 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.482 43.941 325380000 0 0 0 16021000 11979000 6892600 46695000 18251000 16572000 18546000 60275000 67998000 14983000 30720000 16446000 47936 1843 42996 401956;401957;401958;401959;401960;401961;401962;401963;401964;401965;401966;401967;401968;401969;401970;401971;401972 317195;317196;317197;317198 317196 2996 3 SMPIRKDDEVQVVR Unmodified 1670.8774 0.87738903 1843 P61254;Q9UNX3 RPL26;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 yes no 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 38.478 38.678 3 0.0044204 43026 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 59.607 53.2 76239000 0 0 0 6759100 8691100 0 7068300 6612900 0 6551700 9377300 10668000 5301900 5557300 9651300 47937 1843 42996 401973;401974;401975;401976;401977;401978;401979;401980;401981;401982 317199;317200;317201 317199 1 SMPPLDQPSCK Unmodified 1258.5686 0.56859341 4074 Q99961 SH3GL1 Endophilin-A2 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 39.902 40.149 2 0.018457 44193 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 43.512 32.361 23968000 0 0 0 4046600 0 0 0 0 0 0 3010600 0 0 4386800 12524000 47938 4074 42997 401983;401984;401985;401986 317202 317202 1 SMPTSGALDR Oxidation (M) 1049.4812 0.48115861 1380 P36871 PGM1 Phosphoglucomutase-1 yes yes 0 1 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 2 1 1 1 1 1 1 2 16.649 16.88 2 0.013046 16061 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.603 24.174 67440000 0 0 0 0 1725400 0 2031900 0 1058500 0 8591900 10813000 1948500 6027200 35244000 47939 1380 42998 401987;401988;401989;401990;401991;401992;401993;401994;401995;401996 317203;317204;317205 317203 2145 3 SMPTSGALDR Unmodified 1033.4862 0.48624399 1380 P36871 PGM1 Phosphoglucomutase-1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 31.255 31.706 2 0.02504 33318 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.719 10.981 178940000 0 0 0 0 0 0 3252600 0 0 0 32214000 36777000 0 23154000 83543000 47940 1380 42998 401997;401998;401999;402000;402001 317206;317207 317206 2 SMPTVTQIPLEGSNVPQQPQYK Unmodified 2441.2261 0.22606013 4689 Q9NW08 POLR3B DNA-directed RNA polymerase III subunit RPC2 yes yes 0 0 0 By MS/MS 2 0 2 2 83.284 78.563 2;3 5.0704E-40 97712 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 163.27 145.47 79644000 0 79644000 0 0 0 0 0 0 0 0 0 0 0 0 0 47941 4689 42999 402002;402003 317208;317209;317210 317210 3 SMPVLGSVSSVTK Oxidation (M) 1306.6803 0.68025235 6 A0MZ66 KIAA1598 Shootin-1 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 59.128 52.1 2 0.0055195 67289 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.64 46.328 143880000 36032000 107850000 0 0 0 0 0 0 0 0 0 0 0 0 0 47942 6 43000 402004;402005 317211;317212 317211 10 2 SMPVLGSVSSVTK Unmodified 1290.6853 0.68533773 6 A0MZ66 KIAA1598 Shootin-1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 75.461 69.88 2 7.9126E-06 88232 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.39 88.351 432450000 125670000 306780000 0 0 0 0 0 0 0 0 0 0 0 0 0 47943 6 43000 402006;402007;402008 317213;317214 317213 2 SMPVSLEDSGEPTSCPATDAETASEGSVESASETR Oxidation (M) 3586.5047 0.50467493 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 66.304 66.383 3 6.7893E-76 76264 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 104.48 102.69 132550000 0 0 0 5473800 11429000 11634000 7214900 10496000 12243000 14484000 17399000 21966000 0 8596300 11613000 47944 4139 43001 402009;402010;402011;402012;402013;402014;402015;402016;402017;402018;402019 317215;317216;317217;317218;317219;317220;317221;317222;317223;317224;317225;317226;317227;317228 317216 5632 14 SMPWNVDTLSK Unmodified 1276.6122 0.61217279 2612 Q16543 CDC37 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75.704 74.717 2 0.0057603 93081 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.067 60.239 2020800000 64625000 1690000000 11089000 6933100 6394600 14862000 7601300 11294000 10678000 18628000 27335000 23369000 11222000 22865000 93848000 47945 2612 43002 402020;402021;402022;402023;402024;402025;402026;402027;402028;402029;402030;402031;402032;402033;402034 317229;317230;317231;317232 317229 3 SMPWNVDTLSK Oxidation (M) 1292.6071 0.60708741 2612 Q16543 CDC37 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed yes yes 0 1 0 By MS/MS 2 0 1 1 65.116 61.36 2 0.039082 76194 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 55.353 33.116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47946 2612 43002 402035 317233 317233 1 SMQDVVEDFK Oxidation (M) 1212.5333 0.53325376 88 CON__Q3KNV1;P08729 KRT7 Keratin, type II cytoskeletal 7 yes no 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.801 47.963 2 0.0010373 52934 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 90.15 77.162 + 329900000 0 0 0 19296000 23379000 22395000 32747000 20007000 21924000 38711000 30280000 42919000 38716000 21618000 17906000 47947 88 43003 402036;402037;402038;402039;402040;402041;402042;402043;402044;402045;402046;402047 317234;317235;317236;317237;317238;317239;317240;317241 317239 122 4 SMQDVVEDFK Unmodified 1196.5383 0.53833914 88 CON__Q3KNV1;P08729 KRT7 Keratin, type II cytoskeletal 7 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.571 69.646 2 0.0041806 79523 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 84.213 53.958 + 351050000 0 0 0 18511000 25918000 22022000 22891000 23421000 19666000 34620000 34353000 48148000 30559000 25835000 45104000 47948 88 43003 402048;402049;402050;402051;402052;402053;402054;402055;402056;402057;402058;402059 317242;317243;317244;317245;317246;317247;317248;317249;317250 317244 6 SMQDVVEDYK Oxidation (M) 1228.5282 0.52816838 103 CON__Q7Z794;Q7Z794 KRT77 Keratin, type II cytoskeletal 1b yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 32.332 32.532 2 0.0015665 35398 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 84.213 79.247 + 169400000 0 0 0 41832000 9887600 8816600 0 13900000 7327700 20249000 8807000 38320000 8961400 6951900 4342700 47949 103 43004 402060;402061;402062;402063;402064;402065;402066;402067;402068;402069;402070 317251;317252;317253;317254;317255;317256;317257;317258;317259;317260;317261;317262 317254 136 12 SMQDVVEDYK Unmodified 1212.5333 0.53325376 103 CON__Q7Z794;Q7Z794 KRT77 Keratin, type II cytoskeletal 1b yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.898 52.044 2 0.0011859 58803 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 108.98 104.29 + 404940000 0 0 0 90799000 15060000 25757000 18163000 16437000 15800000 56857000 21362000 86597000 22365000 24485000 11258000 47950 103 43004 402071;402072;402073;402074;402075;402076;402077;402078;402079;402080;402081;402082 317263;317264;317265;317266;317267;317268;317269;317270;317271;317272;317273;317274 317264 12 SMQETVNK Unmodified 935.43823 0.43823117 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 8.3987 8.7576 2 0.042322 6890 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 49.65 12.661 4184000 0 0 0 0 0 0 0 0 0 0 4184000 0 0 0 0 47951 1286 43005 402083 317275 317275 1 SMQGFPFYDK Oxidation (M) 1234.5329 0.53285983 877 P09012 SNRPA U1 small nuclear ribonucleoprotein A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.503 64.592 2 0.0021384 74320 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 77.192 71.089 524050000 0 0 0 24981000 25537000 25478000 41785000 35138000 36159000 51744000 53104000 58524000 46711000 48955000 75939000 47952 877 43006 402084;402085;402086;402087;402088;402089;402090;402091;402092;402093;402094;402095 317276;317277;317278;317279;317280;317281;317282;317283;317284;317285;317286;317287;317288;317289 317289 1130 12 SMQGFPFYDK Unmodified 1218.5379 0.53794521 877 P09012 SNRPA U1 small nuclear ribonucleoprotein A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 74.817 74.851 2 0.0094007 86218 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 65.347 58.897 182270000 0 0 0 8387500 10362000 13908000 12934000 22871000 15065000 25201000 25044000 26722000 0 21773000 0 47953 877 43006 402096;402097;402098;402099;402100;402101;402102;402103;402104;402105 317290;317291;317292;317293;317294;317295;317296;317297;317298;317299 317290 8 SMQSLGSCTISK Unmodified 1297.6006 0.60062182 2386 Q14185 DOCK1 Dedicator of cytokinesis protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 43.509 38.361 2 0.018951 49971 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.808 47.489 25907000 0 25907000 0 0 0 0 0 0 0 0 0 0 0 0 0 47954 2386 43007 402106 317300 317300 1 SMSAPVIFDR Unmodified 1121.5539 0.55392963 428 O60749 SNX2 Sorting nexin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 70.093 70.162 2 0.0015959 80815 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 93.649 78.873 97960000 0 0 0 4092900 3871300 12239000 5852500 9410100 0 7642200 10070000 9520700 7586700 7960300 19715000 47955 428 43008 402107;402108;402109;402110;402111;402112;402113;402114;402115;402116;402117 317301;317302;317303;317304;317305;317306;317307;317308;317309;317310;317311;317312 317302 12 SMSAPVIFDR Oxidation (M) 1137.5488 0.54884425 428 O60749 SNX2 Sorting nexin-2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 55.227 55.362 2 0.0015665 62454 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 84.213 60.784 95947000 0 0 0 6728700 6984200 0 10774000 8073100 7549800 0 10581000 13505000 11882000 6946700 12923000 47956 428 43008 402118;402119;402120;402121;402122;402123;402124;402125;402126;402127;402128 317313;317314;317315;317316;317317;317318;317319;317320;317321;317322 317316 546 10 SMSDVSAEDVQNLR Unmodified 1549.7042 0.70423527 3573 Q8WWI1 LMO7 LIM domain only protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.681 56.802 2 1.2899E-85 64575 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 195.51 170.74 214570000 0 0 0 10226000 14850000 13017000 12665000 12400000 11258000 21650000 24237000 28530000 11406000 19134000 35193000 47957 3573 43009 402129;402130;402131;402132;402133;402134;402135;402136;402137;402138;402139;402140 317323;317324;317325;317326;317327;317328;317329;317330;317331;317332;317333 317327 10 SMSDVSAEDVQNLR Oxidation (M) 1565.6991 0.69914989 3573 Q8WWI1 LMO7 LIM domain only protein 7 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 46.67 46.618 2 7.9319E-20 52375 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 137.89 116.43 102710000 0 0 0 21909000 0 0 29717000 21096000 29986000 0 0 0 0 0 0 47958 3573 43009 402141;402142;402143;402144 317334 317334 5066 1 SMSGHPEAAQMVR Unmodified 1399.6337 0.63365328 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 1 1 1 1 1 1 2 2 1 2 27.878 28.149 2;3 0.0025053 29109 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.659 39.705 134540000 0 0 0 6344000 5650800 10338000 5756000 10075000 4621400 8911600 16496000 22002000 15077000 8044000 21225000 47959 2361 43010 402145;402146;402147;402148;402149;402150;402151;402152;402153;402154;402155;402156;402157;402158;402159 317335;317336;317337;317338;317339;317340;317341;317342;317343;317344;317345 317339 11 SMSIDDTPR Unmodified 1020.4546 0.45460951 3933 Q96N67 DOCK7 Dedicator of cytokinesis protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 32.791 32.89 2 0.018109 36235 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 55.112 37.818 51000000 0 0 0 8528700 3020700 5046300 4835300 5672500 0 6582100 0 0 4183000 5319200 7812700 47960 3933 43011 402160;402161;402162;402163;402164;402165;402166;402167;402168 317346;317347;317348;317349;317350 317346 5 SMSSLQNSR Oxidation (M) 1024.4608 0.46075752 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 1 0 By matching By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 6.776 6.9127 2 0.032995 5078 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 42.109 8.3124 6358900 0 0 0 600390 0 0 0 0 610860 0 2155600 1344000 1648100 0 0 47961 2446 43012 402169;402170;402171;402172;402173 317351 317351 1 SMSTEGLMK Oxidation (M) 998.44127 0.44126763 490 O75390 CS Citrate synthase, mitochondrial yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 25.232 21.062 2 0.026973 27822 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.073 52.401 71656000 0 71656000 0 0 0 0 0 0 0 0 0 0 0 0 0 47962 490 43013 402174;402175 317352 317352 1 SMSTEGLMK Unmodified 982.44635 0.44635301 490 O75390 CS Citrate synthase, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 42.421 37.273 2 0.019416 48437 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.478 52.279 155970000 0 155970000 0 0 0 0 0 0 0 0 0 0 0 0 0 47963 490 43013 402176 317353;317354 317353 2 SMSVYCTPNKPSR Unmodified 1525.7017 0.70173285 1041 P16615 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 30.952 31.349 3 0.028143 33075 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 31.526 26.372 16431000 0 0 0 0 0 0 0 6157300 0 0 0 5915300 0 4358400 0 47964 1041 43014 402177;402178;402179 317355 317355 1 SMTEAEQQQLIDDHFLFDK Oxidation (M) 2310.0474 0.047427063 967 P12277 CKB Creatine kinase B-type yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6 4 3 3 1 1 1 1 1 1 82.992 80.502 3 1.4409E-41 101885 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 132.5 123.64 326470000 43448000 182090000 39313000 0 0 2686400 0 0 0 0 10972000 0 0 0 47963000 47965 967 43015 402180;402181;402182;402183;402184;402185 317356;317357;317358;317359;317360 317359 1279 5 SMTEAEQQQLIDDHFLFDK Unmodified 2294.0525 0.052512441 967 P12277 CKB Creatine kinase B-type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 4 3.46 3 1 1 1 1 1 86.194 82.394 3 7.0641E-72 103598 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.19 117.52 447810000 50650000 353440000 19395000 0 0 0 0 0 0 0 0 0 0 0 24329000 47966 967 43015 402186;402187;402188;402189 317361;317362;317363;317364;317365;317366 317361 6 SMTNLQIK Oxidation (M) 949.49027 0.49026674 4655 Q9NUU7 DDX19A ATP-dependent RNA helicase DDX19A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 8.6 2.8 2 8 1 1 1 1 1 1 1 1 1 1 27.274 26.51 2 0.0082575 27016 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.415 27.752 171770000 709680 6634400 0 15844000 0 25545000 22035000 0 13349000 26143000 0 26420000 0 17105000 17982000 47967 4655 43016 402190;402191;402192;402193;402194;402195;402196;402197;402198;402199 317367;317368;317369;317370;317371 317368 6073 3 SMTNLQIK Unmodified 933.49535 0.49535211 4655 Q9NUU7 DDX19A ATP-dependent RNA helicase DDX19A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.8 3.92 2 3 1 1 1 1 1 48.918 42.224 2 0.0024541 55360 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.34 42.962 504620000 61340000 443280000 0 0 0 0 0 0 0 0 0 0 0 0 0 47968 4655 43016 402200;402201;402202;402203;402204 317372;317373;317374;317375;317376 317372 5 SMTSAHGSASVNSR Oxidation (M) 1406.6208 0.62083999 2759 Q5SW79 CEP170 Centrosomal protein of 170 kDa yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 5.784 5.9122 3 0.00053442 3521 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 54.09 46.31 22296000 0 0 0 4740500 0 0 0 0 0 7523400 0 0 0 0 10033000 47969 2759 43017 402205;402206;402207;402208;402209 317377;317378;317379;317380;317381 317381 4386 5 SMTSAHGSASVNSR Unmodified 1390.6259 0.62592537 2759 Q5SW79 CEP170 Centrosomal protein of 170 kDa yes yes 0 0 0 By MS/MS 10 0 1 1 7.7997 8.1587 3 0.014205 6198 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 29.844 24.471 6570600 0 0 0 0 0 0 0 0 0 0 6570600 0 0 0 0 47970 2759 43017 402210 317382 317382 1 SMVAVMDSDTTGK 2 Oxidation (M) 1372.585 0.58503134 784 P04632 CAPNS1 Calpain small subunit 1 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 28 3 3 3 2 2 3 3 1 2 1 3 2 17.57 17.704 2 2.957E-05 17792 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 85.813 85.506 241500000 0 0 0 19601000 18976000 21435000 26751000 15179000 14544000 25385000 12547000 31406000 17760000 14421000 23495000 47971 784 43018 402211;402212;402213;402214;402215;402216;402217;402218;402219;402220;402221;402222;402223;402224;402225;402226;402227;402228;402229;402230;402231;402232;402233;402234;402235;402236;402237;402238 317383;317384;317385;317386;317387;317388;317389;317390;317391;317392;317393;317394;317395;317396;317397;317398;317399;317400;317401;317402;317403;317404;317405;317406;317407;317408;317409;317410;317411 317404 950;951 25 SMVAVMDSDTTGK Oxidation (M) 1356.5901 0.59011671 784 P04632 CAPNS1 Calpain small subunit 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.68 1.57 2 48 2 4 4 4 4 4 4 4 4 4 4 4 4 30.408 30.408 2 3.0936E-09 30959 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 112.15 91.246 589140000 0 20625000 0 36215000 30769000 37844000 49528000 36292000 34200000 45000000 56855000 53353000 56650000 46784000 85022000 47972 784 43018 402239;402240;402241;402242;402243;402244;402245;402246;402247;402248;402249;402250;402251;402252;402253;402254;402255;402256;402257;402258;402259;402260;402261;402262;402263;402264;402265;402266;402267;402268;402269;402270;402271;402272;402273;402274;402275;402276;402277;402278;402279;402280;402281;402282;402283;402284;402285;402286;402287;402288 317412;317413;317414;317415;317416;317417;317418;317419;317420;317421;317422;317423;317424;317425;317426;317427;317428;317429;317430;317431;317432;317433;317434;317435;317436;317437;317438;317439;317440 317431 950;951 28 SMVAVMDSDTTGK Unmodified 1340.5952 0.59520209 784 P04632 CAPNS1 Calpain small subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 47.953 47.659 2 1.057E-41 52470 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 175.15 154.25 827930000 0 112850000 0 29758000 30708000 44562000 45992000 58095000 30085000 65539000 72363000 79023000 58610000 42179000 158170000 47973 784 43018 402289;402290;402291;402292;402293;402294;402295;402296;402297;402298;402299;402300;402301 317441;317442;317443;317444;317445;317446;317447;317448;317449;317450;317451;317452;317453 317445 13 SMVEDITGLR Oxidation (M) 1135.5543 0.55432356 1029 P15924 DSP Desmoplakin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 14 1 2 1 1 2 1 2 1 1 1 1 52.193 52.287 2 0.00099593 60199 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 90.601 53.841 88855000 0 0 0 9190500 9324600 0 0 13152000 0 15091000 10256000 0 8877600 8552600 14411000 47974 1029 43019 402302;402303;402304;402305;402306;402307;402308;402309;402310;402311;402312;402313;402314;402315 317454;317455;317456;317457;317458;317459;317460;317461;317462;317463;317464;317465;317466 317463 1447 12 SMVEDITGLR Unmodified 1119.5594 0.55940893 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.374 70.448 2 0.033145 79831 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 42.19 15.06 118750000 0 0 0 8775700 5603400 7157300 6149200 12443000 5559800 11723000 10822000 13052000 9229200 8941000 19292000 47975 1029 43019 402316;402317;402318;402319;402320;402321;402322;402323;402324;402325;402326;402327 317467;317468;317469 317468 3 SMVEEGTGLR Unmodified 1077.5125 0.51245874 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 35.127 35.188 2 0.010944 37476 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 55.112 7.5129 58835000 0 0 0 7968200 4764000 6988000 0 6407400 4691800 0 0 0 0 8424700 19591000 47976 2501 43020 402328;402329;402330;402331;402332;402333;402334 317470;317471;317472 317471 3 SMVEQLDK Oxidation (M) 964.45355 0.45354688 4810 Q9P287 BCCIP BRCA2 and CDKN1A-interacting protein yes yes 0 1 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 7.39 3.7 5 1 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 17.774 16.622 2 0.016496 20523 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.696 55.742 233080000 7740400 189240000 1634300 1969400 2283500 2710500 2324300 1931600 1332600 2353100 4510100 4318700 3148600 3232400 4354800 47977 4810 43021 402335;402336;402337;402338;402339;402340;402341;402342;402343;402344;402345;402346;402347;402348;402349;402350;402351;402352 317473;317474;317475;317476;317477;317478;317479;317480 317474 6172 8 SMVEQLDK Unmodified 948.45863 0.45863226 4810 Q9P287 BCCIP BRCA2 and CDKN1A-interacting protein yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 4 3.46 3 1 1 1 1 1 38.064 33.073 2 0.015236 43521 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.302 54.199 604830000 16241000 584760000 3837800 0 0 0 0 0 0 0 0 0 0 0 0 47978 4810 43021 402353;402354;402355;402356 317481;317482 317481 2 SMVNLMDR Unmodified 964.44702 0.44702171 841 P07384 CAPN1 Calpain-1 catalytic subunit yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 53.952 54.012 2 0.025292 60192 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 58.815 35.292 60651000 0 0 0 4918600 3542200 0 0 6797000 0 8617100 12838000 0 0 8355400 15582000 47979 841 43022 402357;402358;402359;402360;402361;402362;402363 317483;317484;317485 317485 3 SMVNTKPEK Unmodified 1032.5274 0.52738052 2612 Q16543 CDC37 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 12.912 9.6681 2 0.0033186 14913 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 148.52 104.13 666180000 458370000 156740000 51064000 0 0 0 0 0 0 0 0 0 0 0 0 47980 2612 43023 402364;402365;402366;402367 317486;317487;317488;317489 317488 3 SMVNTKPEK Oxidation (M) 1048.5223 0.52229515 2612 Q16543 CDC37 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5.794 5.2951 2 0.02063 5354 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 126.07 110.57 602530000 171890000 254310000 110460000 3448300 3048700 5085700 4597900 2362200 3077500 4971100 6514800 4930600 3238700 8731600 15863000 47981 2612 43023 402368;402369;402370;402371;402372;402373;402374;402375;402376;402377;402378;402379;402380;402381;402382 317490;317491;317492;317493;317494 317493 4 SMVPVQVQLDVPVVK Oxidation (M) 1652.9171 0.91712858 1078 P18754 RCC1 Regulator of chromosome condensation yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.62 3.84 5 2 9 1 4 2 1 1 1 1 1 1 1 1 1 84.525 82.774 2;3 5.4792E-38 102633 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.7 123.3 869140000 10055000 768110000 9208200 0 2884800 0 3312600 3144600 3589000 6645600 11723000 11966000 0 10145000 28356000 47982 1078 43024 402383;402384;402385;402386;402387;402388;402389;402390;402391;402392;402393;402394;402395;402396;402397;402398 317495;317496;317497;317498;317499;317500;317501;317502;317503;317504;317505;317506;317507;317508;317509;317510 317497 1556 16 SMVPVQVQLDVPVVK Unmodified 1636.9222 0.92221396 1078 P18754 RCC1 Regulator of chromosome condensation yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.8 3.12 3 1 1 1 2 1 1 90.595 86.883 2 6.1512E-10 108650 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.37 115.21 912150000 6815400 897370000 2904700 0 0 0 0 0 0 0 0 0 0 0 5058300 47983 1078 43024 402399;402400;402401;402402;402403 317511;317512;317513;317514;317515;317516 317511 6 SMVSPVPSPTGTISVPNSCPASPR Oxidation (M) 2440.1726 0.17264435 2019 P85037 FOXK1 Forkhead box protein K1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 73.586 73.695 3 9.7226E-22 84832 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 85.248 80.156 116680000 0 0 0 11734000 0 0 0 11115000 0 16943000 12694000 14839000 19967000 15448000 13940000 47984 2019 43025 402404;402405;402406;402407;402408;402409;402410;402411;402412;402413 317517;317518;317519;317520;317521;317522;317523;317524;317525;317526;317527;317528 317521 3273 12 SMVSPVPSPTGTISVPNSCPASPR Unmodified 2424.1777 0.17772973 2019 P85037 FOXK1 Forkhead box protein K1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 77.56 77.825 3 1.8493E-11 89473 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.979 59.987 14402000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14402000 47985 2019 43025 402414;402415 317529;317530 317529 2 SMWTEHK Oxidation (M) 933.40145 0.40145173 494 O75400 PRPF40A Pre-mRNA-processing factor 40 homolog A yes yes 0 1 0 By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 8.3853 8.5221 2 0.041179 5976 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 53.554 45.401 40622000 0 0 0 1664100 1599100 1546800 0 2121500 0 4386200 10280000 6222400 5398900 3241300 4161000 47986 494 43026 402416;402417;402418;402419;402420;402421;402422;402423;402424;402425 317531 317531 1 SMYEEEINETR Unmodified 1399.5926 0.59255956 1111 P20700 LMNB1 Lamin-B1 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 42.597 42.761 2 0.0070215 47712 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 55.084 37.616 26366000 0 0 0 0 0 0 4229900 0 0 5973300 0 0 0 16163000 0 47987 1111 43027 402426;402427;402428 317532;317533 317532 2 SNADYQYQLLR Unmodified 1369.6626 0.66262845 4929 Q9UIV1 CNOT7 CCR4-NOT transcription complex subunit 7 yes yes 0 0 0 By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 61.314 61.466 2 0.019772 70053 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 53.751 33.051 92625000 0 0 0 6160700 0 7913500 7021400 6754000 6091600 10427000 9609100 12402000 7916700 0 18329000 47988 4929 43028 402429;402430;402431;402432;402433;402434;402435;402436;402437;402438 317534;317535 317535 1 SNAPGPPLHIGASHLPR Unmodified 1719.9169 0.91688608 4325 Q9H0E3 SAP130 Histone deacetylase complex subunit SAP130 yes yes 0 0 0 By MS/MS 10 0 1 1 56.346 56.957 4 0.044099 63888 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 17.369 10.932 15708000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15708000 47989 4325 43029 402439 317536 317536 1 SNAQRQDIAFAYQR Unmodified 1666.8176 0.81756596 840 P07355 ANXA2 Annexin A2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.183 45.353 3 5.7665E-05 50689 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 83.729 57.605 260890000 0 0 0 38728000 10986000 15574000 13955000 35212000 10066000 20223000 19266000 26238000 18814000 15951000 35878000 47990 840 43030 402440;402441;402442;402443;402444;402445;402446;402447;402448;402449;402450;402451 317537;317538;317539;317540;317541;317542;317543;317544;317545;317546;317547;317548;317549;317550;317551 317544 15 SNAQRQEISAAFK Unmodified 1448.7372 0.73719038 873 P08758 ANXA5 Annexin A5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 36.391 35.678 3 0.00067822 38191 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 66.533 58.808 338450000 33618000 0 4603300 9263200 0 0 10928000 16395000 0 13188000 41536000 37706000 12891000 29710000 128610000 47991 873 43031 402452;402453;402454;402455;402456;402457;402458;402459;402460;402461;402462 317552;317553;317554;317555;317556;317557;317558;317559;317560 317559 9 SNASLTNNQNLIQSLK Unmodified 1743.9115 0.91152593 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 72.041 71.73 2 4.087E-113 82386 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 200.21 177.29 574070000 0 18691000 0 24308000 27001000 37539000 34798000 29021000 29533000 53684000 57700000 59152000 46029000 50716000 105900000 47992 965 43032 402463;402464;402465;402466;402467;402468;402469;402470;402471;402472;402473;402474;402475 317561;317562;317563;317564;317565;317566;317567;317568;317569;317570;317571;317572;317573 317567 13 SNASTLESHETEEPAAK Unmodified 1799.8174 0.81735077 4936 Q9UJA5 TRMT6 tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.64 2.9 1 1 9 2 1 1 1 1 1 1 1 1 1 24.767 24.227 3 2.9162E-13 29662 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 108.49 101.08 251010000 0 182100000 0 6183100 0 0 5011900 7069800 0 4730100 9606000 7098400 10975000 7366500 10870000 47993 4936 43033 402476;402477;402478;402479;402480;402481;402482;402483;402484;402485;402486 317574;317575;317576;317577;317578;317579;317580;317581;317582;317583;317584;317585 317578 12 SNAVQEADSELK Unmodified 1289.6099 0.60992418 2834 Q5VZL5 ZMYM4 Zinc finger MYM-type protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.519 39.698 2 3.3538E-08 44024 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 125.68 92.42 122830000 0 0 0 6759300 7534000 8713900 9573800 9137900 6856000 12418000 14663000 12823000 11969000 9286300 13095000 47994 2834 43034 402487;402488;402489;402490;402491;402492;402493;402494;402495;402496;402497;402498 317586;317587;317588;317589;317590;317591;317592;317593;317594;317595;317596;317597 317594 12 SNDDLDVSESK Unmodified 1207.5204 0.52044047 3808 Q96EB6 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 22.262 22.54 2 0.00032497 23131 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 89.171 61.868 50621000 0 0 0 2667600 0 0 3146700 2038800 2394700 4444200 5637700 8984300 7143600 5579900 8583800 47995 3808 43035 402499;402500;402501;402502;402503;402504;402505;402506;402507;402508;402509 317598;317599;317600;317601;317602;317603;317604;317605;317606;317607 317603 10 SNDEEAFTFAR Unmodified 1285.5575 0.55749468 910 P0DN79;P35520 CBS Cystathionine beta-synthase yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 59.246 57.913 2 6.8216E-108 65671 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 216.12 204.28 518570000 6389300 193770000 2587600 10863000 11532000 45564000 16000000 13277000 10699000 26776000 33064000 39480000 19293000 30201000 59077000 47996 910 43036 402510;402511;402512;402513;402514;402515;402516;402517;402518;402519;402520;402521;402522;402523;402524;402525 317608;317609;317610;317611;317612;317613;317614;317615;317616;317617;317618;317619;317620;317621;317622;317623;317624;317625;317626 317624 18 SNDELLLPHMK Unmodified 1295.6544 0.65437195 2649 Q2KHR3 QSER1 Glutamine and serine-rich protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 69.009 65.329 3 0.04713 80853 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 24.696 19.597 3195400 0 0 3195400 0 0 0 0 0 0 0 0 0 0 0 0 47997 2649 43037 402526 317627 317627 1 SNDLAVLDASNQISVYK Unmodified 1835.9265 0.92650729 624 O95163 IKBKAP Elongator complex protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.43 3.54 4 1 2 1 3 1 1 1 82.497 79.206 2;3 1.0017E-35 98458 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 166.86 116.67 522510000 8516200 499040000 6618900 0 0 0 0 0 0 4040600 4293600 0 0 0 0 47998 624 43038 402527;402528;402529;402530;402531;402532;402533 317628;317629;317630;317631;317632;317633;317634;317635 317629 7 SNDPVATAFAEMLK Unmodified 1492.7232 0.7231798 4746 Q9NYL9 TMOD3 Tropomodulin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 92.873 93.005 2 1.8947E-14 107884 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 117.23 108.47 36221000 0 0 0 0 0 1899000 0 2629700 2434100 4243500 3040700 4531900 1222000 2378000 13842000 47999 4746 43039 402534;402535;402536;402537;402538;402539;402540;402541;402542 317636;317637;317638;317639;317640;317641;317642;317643;317644 317638 9 SNDPVATAFAEMLK Oxidation (M) 1508.7181 0.71809442 4746 Q9NYL9 TMOD3 Tropomodulin-3 yes yes 0 1 0 By MS/MS 10 0 1 1 78.782 78.88 2 0.0049945 91195 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 62.14 53.608 19730000 0 0 0 0 0 0 0 0 0 19730000 0 0 0 0 0 48000 4746 43039 402543 317645 317645 6123 0 SNDSQQQDVSEFTHK Unmodified 1748.7602 0.76017024 4905 Q9UHP3 USP25 Ubiquitin carboxyl-terminal hydrolase 25 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 36.396 31.091 3 1.857E-10 40695 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.493 75.008 55147000 2799000 52348000 0 0 0 0 0 0 0 0 0 0 0 0 0 48001 4905 43040 402544;402545;402546 317646;317647 317646 1 SNDSTEQNLSDGTPMPDSYPTTPSSTDAATSESK Unmodified 3517.4798 0.47984039 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.1 2.7 1 9 1 1 1 1 1 1 1 1 1 1 68.499 68.705 3 2.0675E-32 73291 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.382 61.329 84698000 0 8812400 0 4182800 0 0 4346600 4215500 6129300 9789100 10679000 0 5874700 10958000 19710000 48002 3119 43041 402547;402548;402549;402550;402551;402552;402553;402554;402555;402556 317648;317649;317650;317651;317652;317653;317654;317655;317656;317657;317658;317659;317660;317661 317650 14 SNDSTEQNLSDGTPMPDSYPTTPSSTDAATSESK Oxidation (M) 3533.4748 0.47475501 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 1 0 By MS/MS 1 0 1 1 105.77 106.67 3 5.6921E-34 98550 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 85.044 84.324 7117700 0 7117700 0 0 0 0 0 0 0 0 0 0 0 0 0 48003 3119 43041 402557 317662 317662 4735 1 SNEDQSMGNWQIK Oxidation (M) 1551.6624 0.66237045 757 P02545 LMNA Prelamin-A/C;Lamin-A/C yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 40.098 39.123 2 7.6213E-35 48884 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 179.57 173.27 454960000 10388000 302100000 0 10628000 6219100 8736700 8601300 7938200 6701600 17718000 18433000 13744000 11205000 12658000 19890000 48004 757 43042 402558;402559;402560;402561;402562;402563;402564;402565;402566;402567;402568;402569;402570;402571;402572 317663;317664;317665;317666;317667;317668;317669;317670;317671;317672;317673;317674;317675 317666 912 13 SNEDQSMGNWQIK Unmodified 1535.6675 0.66745583 757 P02545 LMNA Prelamin-A/C;Lamin-A/C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 56.457 55.229 2;3 2.9694E-230 70503 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 270.54 253.31 490380000 20100000 282550000 0 8608000 5071500 10111000 8227200 10846000 6836400 13156000 29627000 23029000 10161000 14918000 47146000 48005 757 43042 402573;402574;402575;402576;402577;402578;402579;402580;402581;402582;402583;402584;402585;402586;402587 317676;317677;317678;317679;317680;317681;317682;317683;317684;317685;317686;317687;317688 317683 12 SNEDVNSSELDEEYLIELEK Unmodified 2354.0649 0.064910845 4034 Q99614 TTC1 Tetratricopeptide repeat protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 88.743 82.257 2 1.6426E-91 104109 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 211.7 204.33 47495000 12771000 34724000 0 0 0 0 0 0 0 0 0 0 0 0 0 48006 4034 43043 402588;402589 317689;317690 317689 2 SNEEEETSDSSLEK Unmodified 1582.6482 0.64821976 659 O95425 SVIL Supervillin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.523 18.718 2 1.1363E-11 19193 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 100.72 90.49 32845000 0 0 0 2461900 2958900 2880900 1971000 2139600 1904500 2498500 2115900 5927700 3470600 1812400 2703100 48007 659 43044 402590;402591;402592;402593;402594;402595;402596;402597;402598;402599;402600;402601 317691;317692;317693;317694;317695;317696;317697;317698;317699;317700 317693 10 SNEEGSEEK Unmodified 1007.4043 0.40434808 1312 P31947 SFN 14-3-3 protein sigma yes yes 0 0 0 By MS/MS 1 0 1 1 106.61 111.87 2 0.0011748 92576 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 130.75 118.6 145180000 145180000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48008 1312 43045 402602 317701 317701 1 SNEHVLAGGACFNEK Unmodified 1631.7362 0.7362041 657 O95405 ZFYVE9 Zinc finger FYVE domain-containing protein 9 yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 44.653 40.35 3 0.025442 50805 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 31.614 24.886 7973800 0 2154200 5819700 0 0 0 0 0 0 0 0 0 0 0 0 48009 657 43046 402603;402604 317702;317703 317703 2 SNEILTAIIQGMR Oxidation (M) 1460.7657 0.76571331 2457 Q14974 KPNB1 Importin subunit beta-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 84.721 84.827 2 0.00046692 97816 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 72.2 54.336 82167000 0 0 0 0 4249400 11607000 4897700 4810300 5289800 8503700 9646300 6353100 4453900 6763800 15592000 48010 2457 43047 402605;402606;402607;402608;402609;402610;402611;402612;402613;402614;402615 317704;317705;317706;317707;317708;317709;317710;317711 317708 4045 5 SNEILTAIIQGMRK Oxidation (M) 1588.8607 0.86067633 2457 Q14974 KPNB1 Importin subunit beta-1 yes yes 0 1 1 By MS/MS By matching By matching By matching By MS/MS By matching By matching By MS/MS 10 0 10 1 1 2 1 1 1 1 2 79.072 79.234 3 0.00026507 91302 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 61.212 56.498 66477000 0 0 0 0 0 4630800 0 2500600 8723200 3440200 3592100 4125000 0 5773300 33692000 48011 2457 43048 402616;402617;402618;402619;402620;402621;402622;402623;402624;402625 317712;317713;317714 317712 4045 2 SNELFTTFRQEMEK Oxidation (M) 1774.8196 0.81959938 4652 Q9NUQ3 TXLNG Gamma-taxilin yes yes 0 1 1 By MS/MS 2 0 1 1 74.268 66.137 3 0.0097394 87562 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.614 38.412 24245000 24245000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48012 4652 43049 402626 317715 317715 6062 1 SNELTRAVEELHK Unmodified 1524.7896 0.78961988 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 1 By MS/MS By MS/MS 1.67 0.471 1 2 2 1 82.065 79.086 3 2.6164E-06 78877 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.17 97.353 324400000 190590000 133810000 0 0 0 0 0 0 0 0 0 0 0 0 0 48013 965 43050 402627;402628;402629 317716;317717;317718;317719;317720 317717 5 SNELWTEIK Unmodified 1118.5608 0.56078914 1754 P55060 CSE1L Exportin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.42 3.66 3 1 8 1 2 1 1 1 1 1 1 1 1 1 69.483 68.087 2 0.00071589 87067 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.87 90.614 986240000 13074000 745480000 0 0 0 33997000 0 21403000 11140000 34320000 23606000 19024000 0 23210000 60985000 48014 1754 43051 402630;402631;402632;402633;402634;402635;402636;402637;402638;402639;402640;402641 317721;317722;317723;317724;317725;317726;317727;317728;317729;317730;317731;317732;317733;317734 317724 13 SNEPEGQVEPGALR Unmodified 1481.711 0.71103521 462 O75147 OBSL1 Obscurin-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 40.779 40.876 2 0.0012413 45433 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 72.652 54.384 11483000 0 0 0 0 2619800 3506000 0 0 0 0 0 0 0 0 5357200 48015 462 43052 402642;402643;402644;402645;402646;402647;402648 317735;317736;317737;317738;317739;317740;317741 317737 7 SNESVDIQDQEEK Unmodified 1519.6638 0.66381024 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.609 27.807 2 1.7531E-15 28944 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 145.28 138.97 212250000 0 0 0 10905000 12034000 19546000 18016000 11469000 11730000 14720000 22013000 26664000 20558000 19372000 25220000 48016 2804 43053 402649;402650;402651;402652;402653;402654;402655;402656;402657;402658;402659;402660 317742;317743;317744;317745;317746;317747;317748;317749;317750;317751;317752 317745 11 SNEVETSATNGQPDQQAAPK Acetyl (Protein N-term) 2112.956 0.95596952 2021 P98082 DAB2 Disabled homolog 2 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.59 1.87 1 21 1 2 2 2 2 1 1 2 2 1 2 2 2 39.716 39.871 2;3 3.1727E-87 43449 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 215.87 203.31 341190000 0 0 0 17709000 20385000 20498000 30499000 10417000 9095500 39847000 44684000 19082000 26284000 34295000 68396000 48017 2021 43054 402661;402662;402663;402664;402665;402666;402667;402668;402669;402670;402671;402672;402673;402674;402675;402676;402677;402678;402679;402680;402681;402682 317753;317754;317755;317756;317757;317758;317759;317760;317761;317762;317763;317764;317765 317756 13 SNEVETSATNGQPDQQAAPK Unmodified 2070.9454 0.94540483 2021 P98082 DAB2 Disabled homolog 2 yes yes 0 0 0 By matching By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 27.368 27.591 2 2.0168E-20 28818 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.823 88.438 17333000 0 0 0 0 1531000 0 2269400 0 0 0 5584900 0 0 3023800 4923600 48018 2021 43054 402683;402684;402685;402686;402687 317766 317766 1 SNEVTQEISDSTR Unmodified 1464.6692 0.66922997 3228 Q8IVH8 MAP4K3 Mitogen-activated protein kinase kinase kinase kinase 3 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching 10 0 5 1 1 1 1 1 40.801 40.82 2 0.014779 46039 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 40.589 30.934 12443000 0 0 0 0 1772600 0 3791600 0 0 3506600 0 0 3372600 0 0 48019 3228 43055 402688;402689;402690;402691;402692 317767;317768 317768 2 SNEVVAVPTNGTVNNVAQEPVNTLGDISGNK Unmodified 3136.5636 0.56364927 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.964 82.025 3 5.5254E-132 94985 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 144.78 138.62 222060000 0 0 0 1603800 15061000 9271000 8250400 15305000 14788000 37532000 28721000 31589000 6302100 19521000 34114000 48020 5216 43056 402693;402694;402695;402696;402697;402698;402699;402700;402701;402702;402703;402704 317769;317770;317771;317772;317773;317774;317775;317776;317777;317778;317779;317780 317774 12 SNFAEALAAHK Unmodified 1157.5829 0.58292157 838 P07237 P4HB Protein disulfide-isomerase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.27 3.72 1 8 4 24 6 4 3 2 2 2 2 2 2 2 2 2 2 2 2 51.732 50.13 2;3 0.00031818 53638 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 91.584 84.203 14076000000 7801600000 2853300000 1649800000 61950000 56085000 60747000 51902000 78593000 50134000 82917000 255090000 243800000 90716000 187530000 552080000 48021 838 43057 402705;402706;402707;402708;402709;402710;402711;402712;402713;402714;402715;402716;402717;402718;402719;402720;402721;402722;402723;402724;402725;402726;402727;402728;402729;402730;402731;402732;402733;402734;402735;402736;402737;402738;402739;402740;402741 317781;317782;317783;317784;317785;317786;317787;317788;317789;317790;317791;317792;317793;317794;317795;317796;317797;317798;317799;317800;317801;317802;317803;317804;317805;317806;317807;317808;317809;317810;317811;317812;317813;317814;317815;317816;317817;317818 317805 30 SNFGYNIPLK Unmodified 1151.5975 0.597509 1195 P25788 PSMA3 Proteasome subunit alpha type-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.071 72.14 2 0.0091269 82815 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 67.993 52.331 316230000 0 0 0 23653000 6078300 8701500 7758800 13055000 4558200 13505000 49902000 37234000 9923200 30639000 111220000 48022 1195 43058 402742;402743;402744;402745;402746;402747;402748;402749;402750;402751;402752;402753 317819;317820;317821;317822;317823;317824;317825;317826;317827;317828;317829 317827 11 SNFIYGSYLSK Unmodified 1277.6292 0.62920306 2724 Q5FWF5 ESCO1 N-acetyltransferase ESCO1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 71.932 72.158 2 0.025856 83124 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 40.496 19.124 10623000 0 0 0 0 0 0 0 0 0 3776000 2551900 4295500 0 0 0 48023 2724 43059 402754;402755;402756 317830;317831;317832 317830 3 SNFKPSLLAQK Unmodified 1231.6925 0.69247202 3786 Q96CW1 AP2M1 AP-2 complex subunit mu yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 46.977 47.219 3 0.021683 52399 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 30.55 15.519 62133000 0 0 0 0 4574100 2018800 6109400 6995400 0 6145600 7000900 6163500 5185500 7471200 10469000 48024 3786 43060 402757;402758;402759;402760;402761;402762;402763;402764;402765;402766 317833;317834;317835 317835 3 SNFPARAAYQVAALPK Unmodified 1702.9155 0.91548909 1700 P52758 HRSP12 Ribonuclease UK114 yes yes 0 0 1 By MS/MS 2 0 1 1 77.739 69.608 3 0.032876 91611 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 20.389 13.808 7023400 7023400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48025 1700 43061 402767 317836 317836 1 SNFRVQLFEDPTVDK Unmodified 1793.8948 0.89481323 1676 P51948 MNAT1 CDK-activating kinase assembly factor MAT1 yes yes 0 0 1 By MS/MS 2 0 1 1 83.231 75.101 3 0.02048 98377 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 26.548 21.576 18429000 18429000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48026 1676 43062 402768 317837 317837 1 SNFSLAILNVGAPAAGMNAAVR Oxidation (M) 2159.1157 0.11572182 1063 P17858 PFKL ATP-dependent 6-phosphofructokinase, liver type yes yes 0 1 0 By matching By MS/MS 10 0 2 1 1 89.65 89.746 2 1.1303E-10 103990 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.622 54.866 4819100 0 0 0 0 0 1099000 0 0 0 0 0 0 0 0 3720200 48027 1063 43063 402769;402770 317838 317838 1497 1 SNFSLEDFQHSK Unmodified 1437.6525 0.6524577 1787 P56937 HSD17B7 3-keto-steroid reductase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 2 2 1 2 2 1 2 1 2 1 1 59.758 59.855 2;3 0.001116 67849 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 49.732 42.713 145850000 0 0 0 9030300 10056000 12319000 9033600 15176000 10918000 11758000 15417000 15676000 13164000 10123000 13181000 48028 1787 43064 402771;402772;402773;402774;402775;402776;402777;402778;402779;402780;402781;402782;402783;402784;402785;402786;402787;402788 317839;317840;317841;317842;317843;317844;317845;317846;317847;317848;317849;317850;317851;317852 317843 12 SNFSNSADDIK Unmodified 1196.5309 0.53094558 1487 P45973 CBX5 Chromobox protein homolog 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.64 2.9 1 1 9 2 1 1 1 1 1 1 1 1 1 29.295 28.637 2 0.0025849 36570 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.82 87.611 148720000 0 73731000 0 0 5542100 5228200 6076600 0 5435300 8741000 13912000 0 8481600 8654100 12917000 48029 1487 43065 402789;402790;402791;402792;402793;402794;402795;402796;402797;402798;402799 317853;317854;317855;317856;317857;317858;317859;317860;317861;317862 317856 9 SNGALSTEEREEEMK Unmodified 1708.7574 0.75739305 3217 Q8IUD2 ERC1 ELKS/Rab6-interacting/CAST family member 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.7 3.52 2 1 7 3 1 1 1 1 1 1 1 28.415 27.349 2;3 0.004139 35837 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.34 48.967 73126000 0 30427000 0 0 0 0 5218300 0 0 4908600 5455900 6264500 4168700 4929700 11753000 48030 3217 43066 402800;402801;402802;402803;402804;402805;402806;402807;402808;402809 317863;317864;317865;317866 317864 4 SNGELSESPGAGK Unmodified 1231.5681 0.56805936 2195 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.256 16.387 2 0.0055756 16591 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 48.741 40.521 22303000 0 0 0 1990300 1531300 2610900 1634500 1666600 2385900 0 3225900 0 2603600 0 4654100 48031 2195 43067 402810;402811;402812;402813;402814;402815;402816;402817;402818;402819;402820;402821 317867;317868;317869;317870;317871;317872;317873;317874;317875;317876 317867 10 SNGLIHSANVR Unmodified 1166.6156 0.61561868 4043 Q99661 KIF2C Kinesin-like protein KIF2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 25.327 25.469 3 0.017459 25400 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 30.563 17.987 162420000 0 0 0 15025000 15978000 17155000 22853000 12473000 16355000 16802000 12708000 0 11083000 0 21986000 48032 4043 43068 402822;402823;402824;402825;402826;402827;402828;402829;402830;402831 317877;317878 317878 2 SNGREQDLPLAEAVRPK Unmodified 1878.9912 0.99117323 3732 Q96A49 SYAP1 Synapse-associated protein 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 3 18 2 1 1 1 1 2 2 1 1 1 2 2 2 2 53.298 52.466 3;4 0.00071163 58324 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 54.974 51.254 470140000 96713000 0 6394200 5470100 5516000 22251000 25590000 22280000 15359000 22838000 27796000 60703000 44415000 24852000 89964000 48033 3732 43069 402832;402833;402834;402835;402836;402837;402838;402839;402840;402841;402842;402843;402844;402845;402846;402847;402848;402849;402850;402851;402852 317879;317880;317881;317882;317883;317884;317885;317886;317887;317888;317889;317890;317891;317892;317893;317894;317895;317896;317897;317898;317899;317900 317890 19 SNGVQLLQR Unmodified 1013.5618 0.56179219 4387 Q9H3U1 UNC45A Protein unc-45 homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.994 43.168 2 0.0037416 48112 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 96.111 71.437 136640000 0 0 0 9383600 6979000 11657000 9623200 8244500 5852200 14504000 14521000 14483000 11662000 10664000 19065000 48034 4387 43070 402853;402854;402855;402856;402857;402858;402859;402860;402861;402862;402863;402864 317901;317902;317903;317904;317905;317906;317907;317908;317909 317904 9 SNGYEDHMAEDCRGDIGR Acetyl (Protein N-term) 2122.8433 0.84326472 2566 Q15717 ELAVL1 ELAV-like protein 1 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 42.011 42.229 3 0.0013234 46263 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.602 38.269 66292000 0 0 0 0 4834200 6978400 0 0 0 10364000 9711800 0 8531800 6854200 19017000 48035 2566 43071 402865;402866;402867;402868;402869;402870;402871 317910 317910 1 SNHGGIASESLAGGLVEEK Unmodified 1853.9119 0.91191986 2433 Q14686 NCOA6 Nuclear receptor coactivator 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 60.749 60.152 3 7.1835E-14 75769 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 104.84 92.632 104220000 0 6744700 17352000 3024000 3383700 7084100 7223900 7863000 7334600 10074000 7284600 9264200 8196400 9394300 0 48036 2433 43072 402872;402873;402874;402875;402876;402877;402878;402879;402880;402881;402882;402883;402884;402885 317911;317912;317913;317914;317915;317916;317917;317918 317917 7 SNHILEK Unmodified 839.45012 0.45011648 1636 P50748 KNTC1 Kinetochore-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 12.872 9.6736 2 0.0088645 12037 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 153.78 69.535 204670000 126100000 45478000 33094000 0 0 0 0 0 0 0 0 0 0 0 0 48037 1636 43073 402886;402887;402888 317919;317920;317921 317921 2 SNHISQEGVMHK Oxidation (M) 1381.6408 0.64084715 5249 Q9Y5T5 USP16 Ubiquitin carboxyl-terminal hydrolase 16 yes yes 0 1 0 By MS/MS 2 0 1 1 10.046 6.2715 2 0.017419 10415 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.064 38.524 9046600 9046600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48038 5249 43074 402889 317922 317922 6652 1 SNHISQEGVMHK Unmodified 1365.6459 0.64593253 5249 Q9Y5T5 USP16 Ubiquitin carboxyl-terminal hydrolase 16 yes yes 0 0 0 By MS/MS 2 0 1 1 19.424 14.839 2 0.0010661 21529 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.813 72.254 7888500 7888500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48039 5249 43074 402890 317923 317923 1 SNHLLEDSLK Unmodified 1154.5932 0.5931519 1575 P49454 CENPF Centromere protein F yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 40.876 40.741 3 0.032274 43719 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 29.534 17.802 45038000 0 0 9794800 0 0 2360900 2859100 3547500 2482000 0 3370800 8683400 0 3497900 8441300 48040 1575 43075 402891;402892;402893;402894;402895;402896;402897;402898;402899 317924;317925 317924 2 SNHPEDLQAANR Unmodified 1350.6276 0.62763993 4949 Q9UJY4 GGA2 ADP-ribosylation factor-binding protein GGA2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 14.348 14.51 2;3 0.00045761 13939 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 75.479 60.091 303010000 0 0 0 23956000 19210000 26708000 21934000 5659400 16118000 29891000 33098000 29584000 32159000 26647000 38045000 48041 4949 43076 402900;402901;402902;402903;402904;402905;402906;402907;402908;402909;402910;402911;402912;402913;402914;402915;402916;402917;402918;402919;402920;402921;402922;402923 317926;317927;317928;317929;317930;317931;317932;317933;317934;317935;317936;317937 317936 10 SNHPEDLQAANRLIK Unmodified 1704.8907 0.89073091 4949 Q9UJY4 GGA2 ADP-ribosylation factor-binding protein GGA2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 54.07 47.332 3;4 0.0039182 65178 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.788 51.059 99887000 94882000 0 5005200 0 0 0 0 0 0 0 0 0 0 0 0 48042 4949 43077 402924;402925;402926 317938;317939 317939 0 SNHYDPEEDEEYYRK Unmodified 1972.8075 0.80751437 2136 Q07157 TJP1 Tight junction protein ZO-1 yes yes 0 0 1 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 33.506 33.693 3 1.3247E-06 35944 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.37 79.402 59200000 0 0 0 2705800 4234800 6067500 2845800 0 2845600 5619400 5919100 10276000 6592000 4728700 7365600 48043 2136 43078 402927;402928;402929;402930;402931;402932;402933;402934;402935;402936;402937 317940;317941;317942;317943;317944;317945;317946 317942 7 SNIDALLSR Unmodified 987.53491 0.53490874 4972 Q9UKM9 RALY RNA-binding protein Raly yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 62.285 62.396 2 0.037714 71129 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 45.161 13.857 77186000 0 0 0 3838500 0 7141300 6385400 6150500 4327600 8204700 8776700 8753800 12229000 11378000 0 48044 4972 43079 402938;402939;402940;402941;402942;402943;402944;402945;402946;402947 317947;317948;317949 317947 3 SNIGTVYER Unmodified 1037.5142 0.5141733 3590 Q8WXG6 MADD MAP kinase-activating death domain protein yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 31.473 31.735 2 0.013982 33424 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.981 37.533 43988000 0 0 0 0 2521400 4630500 3258800 0 0 0 7222600 9535300 0 6865000 9954300 48045 3590 43080 402948;402949;402950;402951;402952;402953;402954 317950;317951 317950 2 SNIHCNTIAPNAGSR Unmodified 1610.7583 0.75833653 1667 P51659 HSD17B4 Peroxisomal multifunctional enzyme type 2;(3R)-hydroxyacyl-CoA dehydrogenase;Enoyl-CoA hydratase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 23.633 23.812 3 0.036215 23858 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 34.928 27.148 53823000 0 0 0 9981000 5796200 4456200 3819800 4844700 3947800 4370800 0 6155500 3841000 2754500 3855200 48046 1667 43081 402955;402956;402957;402958;402959;402960;402961;402962;402963;402964;402965 317952 317952 0 SNILERNK Unmodified 972.53524 0.53524309 1407 P40121 CAPG Macrophage-capping protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 18.392 14.629 2 0.014562 21147 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 126.62 73.27 1260800000 1183600000 56653000 20561000 0 0 0 0 0 0 0 0 0 0 0 0 48047 1407 43082 402966;402967;402968;402969 317953;317954;317955 317954 1 SNILLLGPTGSGK Unmodified 1255.7136 0.71360139 573 O76031 CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72.862 72.001 2 3.1925E-08 82783 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 106.62 93.527 177310000 35504000 48987000 0 6459100 5177100 7396200 8318700 6865100 5342500 7957800 9706200 10474000 8603900 6702900 9812100 48048 573 43083 402970;402971;402972;402973;402974;402975;402976;402977;402978;402979;402980;402981;402982;402983 317956;317957;317958;317959;317960;317961;317962;317963;317964;317965;317966;317967;317968;317969 317963 13 SNILSDNPDFSDEADIIK Unmodified 1991.9324 0.93238053 535 O75717 WDHD1 WD repeat and HMG-box DNA-binding protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 82.042 82.146 2 5.9319E-08 95198 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 107.35 99.592 69285000 0 0 0 0 2920700 5370800 3500900 3922800 3972100 6147300 8112500 8426700 3699700 5604500 17607000 48049 535 43084 402984;402985;402986;402987;402988;402989;402990;402991;402992;402993;402994 317970;317971;317972;317973;317974;317975;317976;317977;317978;317979 317979 10 SNILSNEMK Oxidation (M) 1050.5016 0.5015597 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24.844 24.093 2 0.0099264 25395 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 57.708 43.989 353680000 7612400 255360000 1938200 9998600 4769900 10017000 0 5583600 5141900 8154900 10532000 11344000 7137200 6702700 9381200 48050 4634 43085 402995;402996;402997;402998;402999;403000;403001;403002;403003;403004;403005;403006;403007;403008 317980;317981;317982;317983;317984;317985;317986;317987 317981 6040 8 SNILSNEMK Unmodified 1034.5066 0.50664508 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 42.939 41.825 2 0.00045211 54415 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.98 102.85 450680000 9518400 250090000 0 12326000 0 28667000 0 0 0 21586000 28172000 25440000 19088000 18874000 36913000 48051 4634 43085 403009;403010;403011;403012;403013;403014;403015;403016;403017;403018;403019 317988;317989;317990;317991;317992 317989 5 SNILVFK Unmodified 819.48544 0.48543935 2175 Q0VDF9 HSPA14 Heat shock 70 kDa protein 14 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 71.301 64.248 2 0.021122 85516 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.63 71.415 234890000 196490000 38403000 0 0 0 0 0 0 0 0 0 0 0 0 0 48052 2175 43086 403020;403021 317993;317994;317995 317995 3 SNINRQLEVYTSGGDPESVAGEYGR Unmodified 2697.2631 0.26305058 5084 Q9Y262 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 0 0 1 By MS/MS 2 0 1 1 74.44 71.592 3 1.2832E-05 87321 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 63.63 60.944 3955600 0 0 3955600 0 0 0 0 0 0 0 0 0 0 0 0 48053 5084 43087 403022 317996 317996 1 SNISVYEVDGK Unmodified 1209.5877 0.58773217 4440 Q9H7Z6 KAT8 Histone acetyltransferase KAT8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 47.488 47.169 2 0.00029638 52779 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 95.642 86.729 125920000 0 29500000 0 0 6773500 8817400 7084400 8630100 7093900 17497000 10122000 11418000 0 6301900 12683000 48054 4440 43088 403023;403024;403025;403026;403027;403028;403029;403030;403031;403032;403033;403034 317997;317998;317999;318000;318001;318002;318003;318004;318005;318006;318007;318008;318009 318007 12 SNITIDPDVKPGEYVIK Acetyl (Protein N-term) 1929.0095 0.0095086389 603 O94915 FRYL Protein furry homolog-like yes yes 1 0 1 By MS/MS 2 0 1 1 85.024 80.28 2 1.2304E-54 99762 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 152.47 120.21 42032000 0 42032000 0 0 0 0 0 0 0 0 0 0 0 0 0 48055 603 43089 403035 318010 318010 1 SNIVTSINFSK Unmodified 1208.6401 0.6401021 4468 Q9H9A6 LRRC40 Leucine-rich repeat-containing protein 40 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 67.844 67.02 2 0.0004637 87570 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 117.52 101.32 185230000 83887000 0 0 6340000 8933900 15747000 9838700 9203500 10919000 17442000 12001000 0 0 10922000 0 48056 4468 43090 403036;403037;403038;403039;403040;403041;403042;403043;403044;403045 318011;318012;318013;318014;318015 318014 3 SNIVTVGDVEEINK Unmodified 1515.7781 0.77805214 1517 P46939 UTRN Utrophin yes yes 0 0 0 By MS/MS 2 0 1 1 72.443 66.716 2 2.6039E-15 84582 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.76 87.756 34019000 0 34019000 0 0 0 0 0 0 0 0 0 0 0 0 0 48057 1517 43091 403046 318016 318016 1 SNLAYDIVQLPTGLTGIK Unmodified 1902.0462 0.046228496 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 3.23 5 2 2 1 5 1 1 1 96.187 92.889 2;3 9.0074E-39 115112 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 182.37 129.98 750040000 19708000 716570000 3992100 0 0 0 0 0 0 0 2172500 0 0 0 7596300 48058 1337 43092 403047;403048;403049;403050;403051;403052;403053;403054;403055 318017;318018;318019;318020;318021;318022;318023;318024;318025;318026;318027 318018 9 SNLDTEVTTAK Unmodified 1177.5826 0.5826468 4584 Q9NR09 BIRC6 Baculoviral IAP repeat-containing protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 30.061 30.089 2 0.0030628 32865 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 64.82 46.281 24287000 0 0 0 4108700 0 8130500 0 2351000 2500900 7195800 0 0 0 0 0 48059 4584 43093 403056;403057;403058;403059;403060 318028;318029;318030;318031 318028 3 SNLELFK Unmodified 849.45962 0.45961853 244 O15042 U2SURP U2 snRNP-associated SURP motif-containing protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 57.749 57.939 2 0.023353 65771 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 91.626 34.163 249800000 0 0 0 0 12232000 27035000 15077000 13566000 15681000 38874000 25595000 29976000 24748000 16595000 30421000 48060 244 43094 403061;403062;403063;403064;403065;403066;403067;403068;403069;403070;403071 318032;318033;318034;318035;318036;318037;318038 318033 7 SNLENIDFK Unmodified 1078.5295 0.52948901 1285 P30566 ADSL Adenylosuccinate lyase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 6.56 3.86 3 1 5 1 2 1 1 1 1 1 1 56.972 54.493 2 0.012756 61047 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 60.828 42.843 1061000000 37567000 972460000 7785100 5764100 0 3212000 0 0 0 6120200 0 14183000 0 13899000 0 48061 1285 43095 403072;403073;403074;403075;403076;403077;403078;403079;403080 318039;318040;318041;318042;318043 318042 5 SNLEVVDTSTFGPESNILENAICDVPDQNSK Unmodified 3391.5726 0.57255898 3631 Q92576 PHF3 PHD finger protein 3 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 96.291 92.253 3 4.4929E-35 114016 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.518 79.515 24620000 0 24620000 0 0 0 0 0 0 0 0 0 0 0 0 0 48062 3631 43096 403081;403082 318044;318045;318046 318044 3 SNLGSVVLQLK Unmodified 1156.6816 0.68157298 295 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.901 77.961 2 0.00026373 90314 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 91.867 57.614 300690000 0 0 0 8333200 11484000 16614000 16826000 15988000 18130000 30680000 30948000 37541000 19364000 30654000 64128000 48063 295 43097 403083;403084;403085;403086;403087;403088;403089;403090;403091;403092;403093;403094 318047;318048;318049;318050;318051;318052;318053;318054;318055;318056;318057;318058;318059 318056 12 SNLHAMIK Unmodified 912.48512 0.48512178 494 O75400 PRPF40A Pre-mRNA-processing factor 40 homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 24.932 24.273 2 0.0054213 25467 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 106.91 42.108 400990000 111630000 0 11147000 0 16042000 15079000 23007000 24046000 16618000 38746000 28118000 91604000 0 24960000 0 48064 494 43098 403095;403096;403097;403098;403099;403100;403101;403102;403103;403104;403105;403106 318060;318061;318062;318063;318064;318065;318066;318067;318068;318069;318070 318067 10 SNLHAMIK Oxidation (M) 928.48004 0.4800364 494 O75400 PRPF40A Pre-mRNA-processing factor 40 homolog A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 12.559 12.675 2 0.014441 11827 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 61.582 31.078 95995000 0 0 0 10109000 10022000 0 0 9970500 0 18723000 0 13336000 20673000 13161000 0 48065 494 43098 403107;403108;403109;403110;403111;403112;403113 318071;318072 318071 645 2 SNLIRIEGDPQGVQQAK Unmodified 1851.9803 0.9802742 2033 Q00341 HDLBP Vigilin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.39 3.7 5 1 12 1 3 2 1 1 1 1 1 1 1 1 1 1 1 1 54.47 53.006 2;3 4.8191E-59 66959 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 159.88 146.45 568040000 82924000 104260000 221980000 8096800 7002000 12359000 17466000 12822000 9681100 21584000 16890000 12521000 10467000 11203000 18783000 48066 2033 43099 403114;403115;403116;403117;403118;403119;403120;403121;403122;403123;403124;403125;403126;403127;403128;403129;403130;403131 318073;318074;318075;318076;318077;318078;318079;318080;318081;318082;318083;318084;318085;318086;318087;318088;318089 318087 16 SNLMDAISFVLGEK Oxidation (M) 1538.765 0.76504461 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 1 0 By MS/MS 2 0 1 1 98.343 90.212 2 0.045721 116407 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.257 31.448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48067 2431 43100 403132 318090 318090 1 SNLNSLDEQEGVK Unmodified 1431.6842 0.68415175 476 O75223 GGCT Gamma-glutamylcyclotransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 39.502 38.372 2 1.1044E-189 43506 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 231.42 195.91 1252000000 24818000 535650000 1927400 199870000 25608000 27061000 21661000 72003000 12766000 40764000 57739000 77027000 33748000 36125000 85232000 48068 476 43101 403133;403134;403135;403136;403137;403138;403139;403140;403141;403142;403143;403144;403145;403146;403147;403148 318091;318092;318093;318094;318095;318096;318097;318098;318099;318100;318101;318102;318103;318104;318105;318106;318107 318105 16 SNLPDNLK Unmodified 899.47125 0.47124585 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 32.585 32.823 2 0.0093078 36132 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 83.313 45.502 364070000 0 0 0 0 19383000 29497000 16550000 104770000 14781000 30168000 23168000 39133000 22379000 22178000 42068000 48069 2392 43102 403149;403150;403151;403152;403153;403154;403155;403156;403157;403158;403159 318108;318109;318110;318111;318112;318113;318114;318115 318115 7 SNLQVSNEPGNR Unmodified 1313.6324 0.63239096 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.98 23.158 2 0.00015234 24067 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 85.958 65.181 37810000 0 0 0 2085600 2747700 1513000 3230600 3371300 1387200 4077300 0 5766400 4931500 3553700 5145100 48070 19 43103 403160;403161;403162;403163;403164;403165;403166;403167;403168;403169;403170;403171 318116;318117;318118;318119;318120;318121;318122;318123;318124;318125 318117 10 SNLSALEDK Unmodified 975.48729 0.48728985 4284 Q9C0B7 TANGO6 Transport and Golgi organization protein 6 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 37.432 32.517 2 0.02624 42368 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.812 26.897 66193000 0 66193000 0 0 0 0 0 0 0 0 0 0 0 0 0 48071 4284 43104 403172 318126 318126 1 SNLSDLLEK Unmodified 1017.5342 0.53424004 2978 Q6UW63 KDELC1 KDEL motif-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 72.684 67.139 2 0.037926 84961 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.213 34.795 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48072 2978 43105 403173 318127 318127 1 SNLSIVSINTVSQPR Unmodified 1613.8737 0.87368386 392 O60293 ZFC3H1 Zinc finger C3H1 domain-containing protein yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.923 74.983 2 7.8256E-07 86473 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 103.88 97.277 57875000 0 0 0 2556000 3843100 3861600 3711200 3753500 5663000 5723800 6025100 7658400 3026200 4290900 7762100 48073 392 43106 403174;403175;403176;403177;403178;403179;403180;403181;403182;403183;403184;403185 318128;318129;318130;318131;318132;318133;318134;318135 318129 7 SNLVDNTNQVEVLQR Unmodified 1727.8802 0.8802258 4655;5016 Q9NUU7;Q9UMR2 DDX19A;DDX19B ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX19B no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.879 62.974 2 7.8078E-27 71922 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 152.14 125.47 157270000 0 0 0 9271300 6761300 14991000 12026000 7236500 7430800 11626000 14072000 17171000 16864000 13443000 26381000 48074 4655;5016 43107 403186;403187;403188;403189;403190;403191;403192;403193;403194;403195;403196;403197 318136;318137;318138;318139;318140;318141;318142;318143;318144;318145;318146;318147 318137 12 SNLVDNTNQVEVLQRDPNSPLYSVK Unmodified 2828.4305 0.43045026 4655;5016 Q9NUU7;Q9UMR2 DDX19A;DDX19B ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX19B no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 78.084 78.19 3 5.1507E-118 90343 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 169.56 161.53 677420000 0 0 0 0 19665000 88573000 23664000 45222000 41617000 111150000 66838000 73341000 34581000 48697000 124070000 48075 4655;5016 43108 403198;403199;403200;403201;403202;403203;403204;403205;403206;403207;403208 318148;318149;318150;318151;318152;318153;318154;318155;318156;318157;318158;318159 318154 12 SNLVISDPIPGAK Unmodified 1309.7242 0.72416608 5070 Q9UQB8 BAIAP2 Brain-specific angiogenesis inhibitor 1-associated protein 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.17 2.36 1 1 16 2 1 1 1 2 1 1 1 1 2 1 2 2 72.616 72.254 2 0.029906 83660 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 50.284 45.5 142230000 0 74582000 0 3849400 4493300 5686700 6149700 2129900 1107900 2105400 7297700 8798200 1887900 10762000 13377000 48076 5070 43109 403209;403210;403211;403212;403213;403214;403215;403216;403217;403218;403219;403220;403221;403222;403223;403224;403225;403226 318160;318161;318162;318163;318164;318165 318160 2 SNMDNMFESYINNLR 2 Oxidation (M) 1878.7876 0.78764732 67;51 CON__H-INV:HIT000292931;CON__P05787;P05787 KRT8 Keratin, type II cytoskeletal 8 no no 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 2 2 2 2 1 2 2 2 2 2 2 80.555 80.632 2;3 2.0592E-59 92881 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 172.92 166.68 + 208290000 0 0 0 2432900 9143800 17663000 9154800 17575000 8432900 29060000 20234000 28652000 13788000 12749000 39401000 48077 51;67 43110 403227;403228;403229;403230;403231;403232;403233;403234;403235;403236;403237;403238;403239;403240;403241;403242;403243;403244;403245;403246;403247;403248 318166;318167;318168;318169;318170;318171;318172;318173;318174;318175;318176;318177;318178;318179 318169 49;50 14 SNMDNMFESYINNLRR 2 Oxidation (M) 2034.8888 0.88875835 67;51 CON__H-INV:HIT000292931;CON__P05787;P05787 KRT8 Keratin, type II cytoskeletal 8 no no 0 2 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 76.775 76.877 3 9.0987E-07 89017 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 79.652 75.213 + 688320000 0 0 0 0 14248000 76688000 25006000 60784000 0 85092000 71039000 70034000 34461000 57409000 193560000 48078 51;67 43111 403249;403250;403251;403252;403253;403254;403255;403256;403257;403258 318180;318181;318182;318183;318184;318185;318186;318187;318188;318189;318190 318187 49;50 9 SNMDNMFESYINNLRR Oxidation (M) 2018.8938 0.89384373 67;51 CON__H-INV:HIT000292931;CON__P05787;P05787 KRT8 Keratin, type II cytoskeletal 8 no no 0 1 1 By MS/MS 10 0 1 1 81.023 81.239 3 0.00080124 93464 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.14 40.335 + 18871000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18871000 48079 51;67 43111 403259 318191 318191 49;50 1 SNMGHPEPASGLAALAK Oxidation (M) 1665.8145 0.81445442 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 6.21 3.92 1 11 4 17 7 6 3 1 2 1 2 2 2 2 1 1 1 2 56.909 54.567 2;3 1.0577E-46 76179 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 136.36 125.09 6446000000 2544900000 1783100000 1407900000 54414000 40008000 15197000 71513000 46954000 41305000 140300000 9048100 0 8312000 97080000 185930000 48080 1565 43112 403260;403261;403262;403263;403264;403265;403266;403267;403268;403269;403270;403271;403272;403273;403274;403275;403276;403277;403278;403279;403280;403281;403282;403283;403284;403285;403286;403287;403288;403289;403290;403291;403292 318192;318193;318194;318195;318196;318197;318198;318199;318200;318201;318202;318203;318204;318205;318206;318207;318208;318209;318210;318211;318212;318213;318214;318215;318216;318217;318218;318219;318220;318221;318222;318223;318224;318225;318226;318227;318228;318229;318230;318231;318232;318233;318234;318235 318215 2504 43 SNMGHPEPASGLAALAK Unmodified 1649.8195 0.8195398 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 6 2 22 3 3 2 2 1 2 2 2 1 2 2 2 2 2 2 61.022 59.598 2;3 2.0967E-19 68030 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 86.367 83.34 7100100000 3383300000 2353400000 715380000 23136000 15111000 67891000 26168000 27426000 14947000 55071000 72336000 51196000 28225000 75895000 190630000 48081 1565 43112 403293;403294;403295;403296;403297;403298;403299;403300;403301;403302;403303;403304;403305;403306;403307;403308;403309;403310;403311;403312;403313;403314;403315;403316;403317;403318;403319;403320;403321;403322 318236;318237;318238;318239;318240;318241;318242;318243;318244;318245;318246;318247;318248;318249;318250;318251;318252;318253;318254;318255;318256;318257;318258;318259;318260;318261;318262;318263;318264;318265;318266 318264 31 SNMSPHGLPAR Oxidation (M) 1181.5611 0.56114027 2272 Q13330 MTA1 Metastasis-associated protein MTA1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 16.867 17.04 3 0.014485 17533 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 45.879 23.793 74058000 0 0 0 6242400 6227600 8244700 6373000 0 5924800 7049800 7981900 11728000 0 7090000 7196000 48082 2272 43113 403323;403324;403325;403326;403327;403328;403329;403330;403331;403332 318267;318268 318267 3702 0 SNMSPHGLPAR Unmodified 1165.5662 0.56622565 2272 Q13330 MTA1 Metastasis-associated protein MTA1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 26.447 26.65 3 0.024036 27500 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 29.936 14.675 32815000 0 0 0 0 0 9137800 0 0 6341100 0 0 0 9115900 8219800 0 48083 2272 43113 403333;403334;403335;403336 318269 318269 1 SNNHENVSLAK Unmodified 1211.5895 0.58946351 3926 Q96MU7 YTHDC1 YTH domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.29 3.67 4 2 11 1 4 1 1 1 1 1 1 1 1 1 1 1 1 14.426 13.332 2;3 0.0020377 17359 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.77 100.44 188830000 6608200 55689000 8731600 9739900 8673700 9851000 0 7259400 6885500 11405000 11550000 12783000 11590000 10433000 17627000 48084 3926 43114 403337;403338;403339;403340;403341;403342;403343;403344;403345;403346;403347;403348;403349;403350;403351;403352;403353 318270;318271;318272;318273;318274 318272 3 SNNIFLHEGLTVK Unmodified 1470.7831 0.78307794 769;919 P10398;P04049 ARAF;RAF1 Serine/threonine-protein kinase A-Raf;RAF proto-oncogene serine/threonine-protein kinase no no 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 75.152 69.544 3 0.0011775 90716 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.196 42.429 135030000 124420000 0 10613000 0 0 0 0 0 0 0 0 0 0 0 0 48085 919;769 43115 403354;403355 318275;318276 318275 2 SNNIINETTTR Unmodified 1261.6262 0.62624295 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 34.496 34.283 2 1.9971E-05 37616 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 130.41 105.54 502140000 0 16050000 0 23447000 21262000 43757000 33364000 25790000 23474000 44004000 61924000 62137000 41001000 41570000 64360000 48086 4634 43116 403356;403357;403358;403359;403360;403361;403362;403363;403364;403365;403366;403367;403368 318277;318278;318279;318280;318281;318282;318283;318284;318285;318286;318287;318288 318286 12 SNNIINETTTRNNALEK Unmodified 1930.9708 0.97083172 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 2 3 2 51.421 45.65 2;3 6.0602E-22 62256 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 115.87 106.68 453020000 80053000 162110000 210860000 0 0 0 0 0 0 0 0 0 0 0 0 48087 4634 43117 403369;403370;403371;403372;403373;403374;403375 318289;318290;318291;318292;318293;318294;318295 318294 5 SNNLEREQEQLDR Unmodified 1629.7707 0.77067535 4552 Q9NPI1 BRD7 Bromodomain-containing protein 7 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 30.142 30.288 3 0.0047009 32339 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 46.408 35.147 148860000 0 0 0 12089000 7420200 10546000 10317000 13513000 12030000 13266000 14513000 19763000 20831000 14573000 0 48088 4552 43118 403376;403377;403378;403379;403380;403381;403382;403383;403384;403385;403386 318296;318297 318296 2 SNNLTDRIVVIPGK Unmodified 1524.8624 0.86239089 3190 Q86X55 CARM1 Histone-arginine methyltransferase CARM1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 74.314 68.706 3 0.0012804 89751 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.044 57.41 181220000 171220000 0 9991100 0 0 0 0 0 0 0 0 0 0 0 0 48089 3190 43119 403387;403388 318298;318299 318298 1 SNNPEDGVQAPSSTAVFR Unmodified 1874.8759 0.8758687 3745 Q96AY4 TTC28 Tetratricopeptide repeat protein 28 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 60.499 60.537 2 0.00053093 69785 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 65.043 58.94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48090 3745 43120 403389;403390;403391;403392;403393;403394;403395 318300;318301;318302;318303;318304;318305;318306 318305 7 SNNSETSSVAQSGSESK Unmodified 1697.734 0.73401507 1601;32 P49792;A6NKT7;Q7Z3J3 RANBP2;RGPD3;RGPD4 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 3;RanBP2-like and GRIP domain-containing protein 4 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 9.907 10.038 2 4.4513E-83 6710 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 184.21 173.98 105120000 0 0 0 5710500 3502600 9001400 8178600 5424600 5232700 8504200 17096000 12262000 7837800 9006700 13361000 48091 1601;32 43121 403396;403397;403398;403399;403400;403401;403402;403403;403404;403405;403406;403407 318307;318308;318309;318310;318311;318312;318313;318314;318315;318316;318317 318311 11 SNNSETSSVAQSGSESKVEPK Unmodified 2150.9927 0.99274896 1601;32 P49792;A6NKT7;Q7Z3J3 RANBP2;RGPD3;RGPD4 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 3;RanBP2-like and GRIP domain-containing protein 4 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 22.264 22.328 3 0.0011132 23292 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 30.969 27.632 24673000 0 0 0 3403100 2402400 0 5224200 3932900 0 0 0 0 5858100 3852700 0 48092 1601;32 43122 403408;403409;403410;403411;403412;403413 318318;318319;318320;318321;318322 318319 5 SNNSMAQAMK Oxidation (M) 1096.4641 0.46412834 348 O43633 CHMP2A Charged multivesicular body protein 2a yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS 7.6 3.67 3 7 1 2 1 1 1 1 1 1 1 6.5028 5.8751 2 0.0011595 4419 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 88.819 80.588 68045000 0 41690000 0 0 4865200 5542700 2816200 0 2360700 0 0 0 2355900 2990000 5423700 48093 348 43123 403414;403415;403416;403417;403418;403419;403420;403421;403422;403423 318323;318324;318325;318326;318327;318328 318328 433;434 5 SNNSMAQAMK Unmodified 1080.4692 0.46921372 348 O43633 CHMP2A Charged multivesicular body protein 2a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 17.919 17.432 2 6.856E-05 21707 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.16 110.95 247690000 4885800 135160000 0 5621700 5170700 7495200 8658100 0 4598900 8093100 14756000 13157000 8534900 7689000 23874000 48094 348 43123 403424;403425;403426;403427;403428;403429;403430;403431;403432;403433;403434;403435;403436 318329;318330;318331;318332;318333;318334;318335 318332 7 SNNSMAQAMK 2 Oxidation (M) 1112.459 0.45904296 348 O43633 CHMP2A Charged multivesicular body protein 2a yes yes 0 2 0 By MS/MS 1 0 1 1 106.58 111.85 2 0.0096775 92565 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 74.376 57.136 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48095 348 43123 403437 318336 318336 433;434 1 SNNVEMDWVLK Oxidation (M) 1349.6286 0.62855113 1309 P31943 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.65 3.65 5 12 4 1 1 1 1 1 1 1 1 1 1 1 1 1 67.845 66.723 2 0.00028886 75383 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 85.29 73.054 504700000 0 313080000 4601200 8749000 8954900 11497000 15666000 9411800 10701000 20369000 21916000 22131000 18281000 16175000 23162000 48096 1309 43124 403438;403439;403440;403441;403442;403443;403444;403445;403446;403447;403448;403449;403450;403451;403452;403453;403454 318337;318338;318339;318340;318341;318342;318343;318344;318345;318346;318347;318348;318349;318350 318348 1938 14 SNNVEMDWVLK Unmodified 1333.6336 0.63363651 1309 P31943 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 79.333 78.676 2 2.3341E-05 90053 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 122.26 106.6 1659800000 0 1106700000 14456000 14612000 19941000 55026000 30106000 33748000 49431000 60616000 54173000 39079000 33316000 52954000 95639000 48097 1309 43124 403455;403456;403457;403458;403459;403460;403461;403462;403463;403464;403465;403466;403467;403468;403469;403470 318351;318352;318353;318354;318355;318356;318357;318358;318359;318360;318361;318362;318363;318364;318365;318366;318367 318361 16 SNNWSLEDVTASDK Unmodified 1564.7005 0.7005301 2430 Q14680 MELK Maternal embryonic leucine zipper kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 66.994 67.143 2 3.4318E-05 76138 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 85.288 71.479 39041000 0 0 0 0 1540000 2669400 2600400 3583100 2956800 2878600 5153100 5046100 4204000 2912500 5497000 48098 2430 43125 403471;403472;403473;403474;403475;403476;403477;403478;403479;403480;403481 318368;318369;318370;318371;318372;318373;318374;318375;318376;318377;318378 318375 11 SNPDQPAVILLLR Unmodified 1434.8195 0.81946344 2947 Q6PGP7 TTC37 Tetratricopeptide repeat protein 37 yes yes 0 0 0 By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 88.173 88.273 2 0.0025562 102131 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.387 63.855 44430000 0 0 0 0 2232500 5540200 2910900 0 3221200 6730300 5573100 5807500 3238700 0 9175400 48099 2947 43126 403482;403483;403484;403485;403486;403487;403488;403489;403490 318379;318380 318380 2 SNPEDQILYQTER Unmodified 1591.7478 0.74781464 2383 Q14165 MLEC Malectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 2 1 1 1 1 1 59.755 60.01 2 0.00092118 68277 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 68.069 58.636 17995000 0 0 0 0 0 0 4905800 0 0 0 0 5855200 4131800 3102100 0 48100 2383 43127 403491;403492;403493;403494;403495;403496;403497 318381;318382;318383;318384;318385;318386;318387 318381 7 SNPEIQDFMRK Unmodified 1363.6554 0.65543458 832 P06865 HEXA Beta-hexosaminidase subunit alpha yes yes 0 0 1 By matching By MS/MS By MS/MS 2 0 3 1 1 1 64.339 58.344 3 0.037998 71908 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 37.144 28.444 19010000 2928700 11649000 4432400 0 0 0 0 0 0 0 0 0 0 0 0 48101 832 43128 403498;403499;403500 318388;318389 318389 2 SNPFAHLAEPLDPVQPGK Acetyl (Protein N-term) 1957.9898 0.98977625 1126 P21399 ACO1 Cytoplasmic aconitate hydratase yes yes 1 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 6.45 3.89 4 1 6 1 4 1 1 1 1 2 90.607 88.308 2;3 2.6678E-81 109775 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 235.02 202.49 1768500000 15532000 1710600000 0 0 0 948670 0 0 0 0 4961700 3551500 0 2928400 29971000 48102 1126 43129 403501;403502;403503;403504;403505;403506;403507;403508;403509;403510;403511 318390;318391;318392;318393;318394;318395;318396;318397;318398;318399;318400;318401 318390 11 SNPFAHLAEPLDPVQPGKK Acetyl (Protein N-term) 2086.0847 0.084739267 1126 P21399 ACO1 Cytoplasmic aconitate hydratase yes yes 1 0 1 By MS/MS 2 0 1 1 89.792 84.919 3 3.2604E-07 105491 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.22 84.104 68780000 0 68780000 0 0 0 0 0 0 0 0 0 0 0 0 0 48103 1126 43130 403512 318402;318403 318403 2 SNPGDFTLSVR Unmodified 1191.5884 0.58840088 2122 Q06124 PTPN11 Tyrosine-protein phosphatase non-receptor type 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 62.82 62.893 2 0.0098603 70986 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 50.108 38.886 35151000 0 0 0 5953500 0 0 6464800 0 5289500 0 0 0 0 7932100 9511600 48104 2122 43131 403513;403514;403515;403516;403517 318404;318405;318406 318406 3 SNPGLNEEITK Unmodified 1200.5986 0.59863121 5263 Q9Y620 RAD54B DNA repair and recombination protein RAD54B yes yes 0 0 0 By MS/MS 10 0 1 1 35.875 36.618 2 0.0037287 39914 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 98.055 63.247 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48105 5263 43132 403518 318407 318407 1 SNPLRTEDQTLITK Unmodified 1614.8577 0.85769944 2222 Q12996 CSTF3 Cleavage stimulation factor subunit 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 4 1 2 1 54.984 49.051 2;3 0.0021949 63994 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.357 45.672 135760000 15295000 69178000 51282000 0 0 0 0 0 0 0 0 0 0 0 0 48106 2222 43133 403519;403520;403521;403522 318408;318409;318410 318408 2 SNPPPSLAITPTILK Unmodified 1547.8923 0.89229404 2970 Q6T4R5 NHS Nance-Horan syndrome protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 82.786 82.729 2 0.0084932 96123 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 38.634 28.629 16704000 0 0 0 2066900 2459300 0 3354300 0 0 0 0 0 2859900 5964100 0 48107 2970 43134 403523;403524;403525;403526;403527 318411;318412 318411 2 SNPQLMAAFIK Unmodified 1218.6431 0.64307898 3662 Q92793 CREBBP CREB-binding protein yes yes 0 0 0 By MS/MS 10 0 1 1 80.422 79.988 2 0.022787 92888 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 56.916 41.254 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48108 3662 43135 403528 318413 318413 1 SNPSASSGPWK Unmodified 1116.52 0.51998696 3897 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 27.636 27.735 2 0.012276 29870 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 47.706 33.549 60079000 0 0 0 5125600 4288900 11940000 0 0 8660300 9382100 0 11450000 9232000 0 0 48109 3897 43136 403529;403530;403531;403532;403533;403534;403535 318414;318415 318414 2 SNPSAVAGNETPGASTK Unmodified 1586.7536 0.7536283 4867 Q9UDY2 TJP2 Tight junction protein ZO-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 25.327 24.531 2 2.0575E-06 26539 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 89.466 76.113 50382000 2987300 0 0 12980000 6102900 8870100 7150000 6155800 0 0 0 0 0 6136300 0 48110 4867 43137 403536;403537;403538;403539;403540;403541;403542;403543 318416;318417;318418;318419;318420;318421;318422 318421 7 SNPSIQATLNK Unmodified 1171.6197 0.619701 2975 Q6UUV7 CRTC3 CREB-regulated transcription coactivator 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.731 38.911 2 0.0018474 42863 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 70.439 32.137 482290000 0 0 0 20009000 30645000 28449000 29268000 22023000 24504000 45716000 56909000 87370000 52910000 30333000 54150000 48111 2975 43138 403544;403545;403546;403547;403548;403549;403550;403551;403552;403553;403554;403555 318423;318424;318425;318426;318427;318428;318429;318430;318431;318432;318433 318425 11 SNPSVFVIFQK Unmodified 1264.6816 0.68157298 3073 Q7Z2W4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 84.306 84.403 2 0.012697 97626 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 44.309 39.858 79718000 0 0 0 0 4899100 9058700 9658000 9773700 9759200 8455300 12182000 12963000 2968900 0 0 48112 3073 43139 403556;403557;403558;403559;403560;403561;403562;403563;403564 318434;318435;318436;318437;318438 318437 5 SNPVIPISSSNHSAR Unmodified 1564.7958 0.79576789 675 O95628 CNOT4 CCR4-NOT transcription complex subunit 4 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 40.501 40.375 3 0.0023635 44856 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 60.246 53.207 57630000 0 0 0 10930000 6784000 0 16228000 11872000 11817000 0 0 0 0 0 0 48113 675 43140 403565;403566;403567;403568;403569 318439 318439 0 SNPYFEFVLK Unmodified 1242.6285 0.62847478 3548 Q8WUM0 NUP133 Nuclear pore complex protein Nup133 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 90.732 87.055 2 0.040147 108519 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 54.982 39.32 19140000 0 18034000 1105300 0 0 0 0 0 0 0 0 0 0 0 0 48114 3548 43141 403570;403571 318440 318440 1 SNPYYIVK Unmodified 982.51238 0.51238239 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 46.27 46.31 2 0.038808 52157 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 50.898 24.789 114980000 0 0 0 7295600 7640500 15306000 10419000 0 7397700 19506000 13832000 0 17671000 15914000 0 48115 5071 43142 403572;403573;403574;403575;403576;403577;403578;403579;403580 318441 318441 1 SNQELER Unmodified 874.41446 0.41445926 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 7.2673 7.3458 2 0.025177 5237 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 81.297 20.509 10920000 0 0 0 1721800 1772100 1866400 0 0 3421000 0 0 0 0 699040 1439900 48116 2556 43143 403581;403582;403583;403584;403585;403586 318442;318443 318443 2 SNQHNQQLPGCSGFTGSLTNLQNQENAK Unmodified 3071.4115 0.4115225 1026 P15822 HIVEP1 Zinc finger protein 40 yes yes 0 0 0 By MS/MS 2 0 1 1 76.061 67.931 3 2.3581E-29 89604 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.489 84.591 16312000 16312000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48117 1026 43144 403587 318444 318444 1 SNQLFNGHGGHIMPPTQSQFGEMGGK 2 Oxidation (M) 2787.2493 0.24933154 1974 P78344 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 0 2 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 2 1 1 1 59.374 59.592 3;4 1.5936E-10 67776 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 51.857 45.696 114140000 0 0 0 0 0 24750000 4208400 7110200 32673000 0 9093700 30484000 0 5816100 0 48118 1974 43145 403588;403589;403590;403591;403592;403593;403594;403595 318445;318446;318447;318448 318446 3177;3178 4 SNQLFNGHGGHIMPPTQSQFGEMGGK Unmodified 2755.2595 0.2595023 1974 P78344 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 0 0 0 By MS/MS 10 0 1 1 70.588 71.023 4 0.00094098 81032 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 26.841 22.86 7994700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7994700 48119 1974 43145 403596 318449 318449 1 SNQQLENDLNLMDIK Oxidation (M) 1789.8516 0.85162779 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.963 74.024 2 8.388E-113 85120 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 200.82 180.61 1313700000 0 0 0 81806000 105290000 190540000 91126000 62050000 98543000 141200000 105650000 147840000 84544000 79871000 125200000 48120 1518 43146 403597;403598;403599;403600;403601;403602;403603;403604;403605;403606;403607;403608 318450;318451;318452;318453;318454;318455;318456;318457;318458;318459;318460;318461 318450 2409 12 SNQQLENDLNLMDIK Unmodified 1773.8567 0.85671317 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.56 1.83 1 17 1 1 1 2 1 1 1 2 1 1 2 2 2 82.636 82.438 2;3 6.1051E-66 101879 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 191.79 161.06 699520000 0 162960000 0 6933000 18225000 44814000 13504000 30805000 21004000 76769000 44551000 43291000 30191000 57437000 149030000 48121 1518 43146 403609;403610;403611;403612;403613;403614;403615;403616;403617;403618;403619;403620;403621;403622;403623;403624;403625;403626 318462;318463;318464;318465;318466;318467;318468;318469;318470;318471;318472;318473;318474;318475 318465 13 SNQQLEQDLNIMDIK Unmodified 1787.8724 0.87236323 3166 Q86VI3 IQGAP3 Ras GTPase-activating-like protein IQGAP3 yes yes 0 0 0 By MS/MS 10 0 1 1 73.972 74.125 2 0.0010563 85329 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 64.374 39.992 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48122 3166 43147 403627 318476 318476 1 SNQQLVDIIEK Unmodified 1285.6878 0.68778057 1844 P61289 PSME3 Proteasome activator complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 71.199 70.026 2 2.6872E-16 88616 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 182.71 159.64 5243200000 72875000 4386800000 22912000 34613000 30427000 67313000 47056000 43677000 30105000 74746000 87210000 75002000 47401000 66846000 156200000 48123 1844 43148 403628;403629;403630;403631;403632;403633;403634;403635;403636;403637;403638;403639;403640;403641;403642;403643 318477;318478;318479;318480;318481;318482;318483;318484;318485;318486;318487;318488;318489;318490 318480 10 SNQQNLGTIK Unmodified 1101.5778 0.57783619 1171 P23921 RRM1 Ribonucleoside-diphosphate reductase large subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.8 3.94 2 4 2 12 3 3 2 1 1 1 1 1 1 1 1 1 1 1 1 31.803 31.212 2 8.3754E-24 23034 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 176.79 143 1589000000 141010000 30156000 18889000 81817000 62970000 138470000 120210000 58561000 81435000 161300000 144250000 138270000 99422000 114010000 198280000 48124 1171 43149 403644;403645;403646;403647;403648;403649;403650;403651;403652;403653;403654;403655;403656;403657;403658;403659;403660;403661;403662;403663 318491;318492;318493;318494;318495;318496;318497;318498;318499;318500;318501;318502;318503;318504;318505;318506;318507;318508;318509;318510 318492 20 SNQTAYVPAPLRK Unmodified 1443.7834 0.78341229 5054 Q9UPQ0 LIMCH1 LIM and calponin homology domains-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.6 1.74 1 19 1 1 1 2 1 1 1 2 2 2 2 2 2 46.608 46.437 2;3 6.3364E-06 52018 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 123.11 115.47 524040000 27517000 0 0 26329000 24084000 36402000 34057000 25708000 35805000 53039000 48497000 57506000 47996000 43243000 63858000 48125 5054 43150 403664;403665;403666;403667;403668;403669;403670;403671;403672;403673;403674;403675;403676;403677;403678;403679;403680;403681;403682;403683 318511;318512;318513;318514;318515;318516;318517;318518;318519;318520;318521;318522;318523 318516 7 SNQTTTDNLR Unmodified 1148.5422 0.54217896 4467 Q9H9A5 CNOT10 CCR4-NOT transcription complex subunit 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.582 11.71 2 0.002011 9464 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 98.033 88.046 62270000 0 0 0 3782300 4320700 6071300 3908000 5717600 4481300 5629100 6323000 0 7517400 5718800 8800500 48126 4467 43151 403684;403685;403686;403687;403688;403689;403690;403691;403692;403693;403694 318524;318525;318526;318527;318528;318529;318530;318531;318532;318533;318534 318531 4 SNQVSIAGQPAGVESAR Unmodified 1669.8384 0.83836099 4412 Q9H694 BICC1 Protein bicaudal C homolog 1 yes yes 0 0 0 By MS/MS 10 0 2 2 46.425 46.482 2 0.0007511 52366 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 59.116 43.577 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48127 4412 43152 403695;403696 318535;318536 318536 2 SNRHVAVTNMNEHSSR Oxidation (M) 1853.8551 0.85509046 1328 P33176;Q12840 KIF5B;KIF5A Kinesin-1 heavy chain;Kinesin heavy chain isoform 5A yes no 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 6.1875 6.2299 4 0.0014743 4455 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 49.425 45.204 35007000 0 0 0 2613600 4102300 3909600 0 4432200 0 0 9253600 10695000 0 0 0 48128 1328 43153 403697;403698;403699;403700;403701;403702 318537;318538 318537 1977 2 SNRIEEQNDK Unmodified 1231.5793 0.57929275 2768 Q5T1M5 FKBP15 FK506-binding protein 15 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 6 2 2 2 6.6731 3.7089 2;3 0.00018545 5750 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 175.65 126.23 158610000 15231000 53666000 89718000 0 0 0 0 0 0 0 0 0 0 0 0 48129 2768 43154 403703;403704;403705;403706;403707;403708 318539;318540 318540 1 SNSAPLIHGLSDTSPVFQAEAPSAR Unmodified 2551.2667 0.26667939 3803 Q96E09 FAM122A Protein FAM122A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 79.591 79.703 3 0.001654 91874 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 26.816 5.446 68143000 0 0 0 0 3057800 0 2965400 3772400 5456400 8543300 6866700 9657000 5267100 4125700 18432000 48130 3803 43155 403709;403710;403711;403712;403713;403714;403715;403716;403717;403718 318541 318541 1 SNSDESNFSEK Unmodified 1242.5 0.50003938 710 O95999 BCL10 B-cell lymphoma/leukemia 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 12.592 12.706 2 0.017282 11929 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 51.436 39.946 16609000 0 0 0 1427300 1571700 1676100 2062500 0 0 2202200 2493200 0 0 1215800 3960300 48131 710 43156 403719;403720;403721;403722;403723;403724;403725;403726 318542;318543 318542 2 SNSFNNPLGNR Unmodified 1218.5741 0.5741478 700 O95835 LATS1 Serine/threonine-protein kinase LATS1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 45.902 46.288 2 0.0080109 52085 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 52.591 33.497 29659000 0 0 0 0 0 0 0 0 0 7488200 6935000 0 4373000 3687400 7175500 48132 700 43157 403727;403728;403729;403730;403731 318544;318545 318544 2 SNSGEKYWMFTTEDAVK Unmodified 1991.8935 0.8934926 2687 Q4L235 AASDH Acyl-CoA synthetase family member 4 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 76.487 69.952 3 0.011398 87501 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 23.991 19.605 76514000 15322000 61192000 0 0 0 0 0 0 0 0 0 0 0 0 0 48133 2687 43158 403732;403733 318546 318546 1 SNSHAAIDWGK Unmodified 1184.5574 0.5574351 3038 Q7KZ85 SUPT6H Transcription elongation factor SPT6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 36.372 31.476 3 0.024386 39617 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 56.087 46.729 141710000 110480000 12859000 18376000 0 0 0 0 0 0 0 0 0 0 0 0 48134 3038 43159 403734;403735;403736 318547 318547 0 SNSIIVSPR Unmodified 971.53999 0.53999412 855 P07992 ERCC1 DNA excision repair protein ERCC-1 yes yes 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 38.223 38.311 2 0.024054 42319 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 50.805 27.656 89227000 0 0 0 7667700 7491900 9609800 11338000 0 6347100 11323000 0 0 11955000 11234000 12262000 48135 855 43160 403737;403738;403739;403740;403741;403742;403743;403744;403745 318548;318549 318548 2 SNSISEELER Unmodified 1162.5466 0.54659564 3080 Q7Z3B3 KANSL1 KAT8 regulatory NSL complex subunit 1 yes yes 0 0 0 By matching By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 40.887 41.078 2 0.013133 45727 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 51.436 34.896 68068000 0 0 0 0 4536600 6968400 4801600 6588600 5610100 7492600 10224000 8528100 7414600 5904100 0 48136 3080 43161 403746;403747;403748;403749;403750;403751;403752;403753;403754;403755 318550 318550 1 SNSLAFIK Unmodified 878.48617 0.48616764 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 57.5 56.175 2 0.0062529 73562 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.88 90.99 1340700000 457890000 478260000 16960000 22473000 23623000 31273000 24599000 26875000 17534000 39824000 38718000 49023000 31195000 32301000 50161000 48137 2392 43162 403756;403757;403758;403759;403760;403761;403762;403763;403764;403765;403766;403767;403768;403769;403770;403771 318551;318552;318553;318554;318555;318556;318557;318558;318559;318560;318561;318562;318563;318564 318553 8 SNSLISIK Unmodified 860.49673 0.49673232 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.71 5 11 2 1 2 1 1 1 1 1 1 1 1 1 1 1 50.243 48.479 2 0.012067 63590 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.29 61.343 937600000 147480000 486930000 17602000 13907000 17707000 31526000 21115000 0 15673000 32101000 26581000 30455000 26930000 27893000 41700000 48138 528 43163 403772;403773;403774;403775;403776;403777;403778;403779;403780;403781;403782;403783;403784;403785;403786;403787 318565;318566;318567;318568;318569;318570;318571;318572;318573 318568 5 SNSLSEQLAINTSPDAVK Unmodified 1872.9429 0.94288564 2768 Q5T1M5 FKBP15 FK506-binding protein 15 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 70.92 70.202 2 8.9183E-277 87368 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 334.72 325.62 221960000 0 181890000 0 0 1689500 3323400 0 2950500 0 6373800 5722400 5601900 4407200 4417300 5579100 48139 2768 43164 403788;403789;403790;403791;403792;403793;403794;403795;403796;403797;403798;403799 318574;318575;318576;318577;318578;318579;318580;318581;318582;318583;318584 318576 11 SNSMVDVCSVDRR Unmodified 1523.6821 0.68206004 4674 Q9NVN8 GNL3L Guanine nucleotide-binding protein-like 3-like protein yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 39.074 39.384 3 0.0043987 43244 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 33.204 3.5151 24155000 0 0 0 0 0 0 2911900 0 2844200 4457800 5274500 5186700 0 3479900 0 48140 4674 43165 403800;403801;403802;403803;403804;403805;403806 318585;318586;318587;318588 318588 4 SNSNAVSAIPINK Unmodified 1313.6939 0.69392858 812 P05549 TFAP2A Transcription factor AP-2-alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 48.822 48.525 2 4.4427E-07 53754 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 96.24 87.753 248600000 0 26961000 0 10992000 12952000 15744000 15354000 11484000 12007000 20425000 24663000 26198000 20654000 23197000 27969000 48141 812 43166 403807;403808;403809;403810;403811;403812;403813;403814;403815;403816;403817;403818;403819 318589;318590;318591;318592;318593;318594;318595;318596;318597;318598;318599 318596 10 SNSNIHPIFSWCGSTDSK Unmodified 2035.9058 0.90578862 2978 Q6UW63 KDELC1 KDEL motif-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 79.934 71.803 3 0.017129 94229 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 37.379 28.734 13989000 13989000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48142 2978 43167 403820 318600 318600 0 SNSPGTASSGSSRLPQPSGAGK Unmodified 2028.9825 0.98245904 3861 Q96GY0 ZC2HC1A Zinc finger C2HC domain-containing protein 1A yes yes 0 0 1 By MS/MS 2 0 1 1 33.131 27.094 3 0.00055216 38061 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.229 38.571 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48143 3861 43168 403821 318601 318601 1 SNSQSDSHDEEVSPTPPNPVVK Unmodified 2349.0721 0.072061909 1299 P31321 PRKAR1B cAMP-dependent protein kinase type I-beta regulatory subunit yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 50.697 45.376 3 7.3944E-09 58787 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.66 68.729 33334000 0 33334000 0 0 0 0 0 0 0 0 0 0 0 0 0 48144 1299 43169 403822;403823 318602;318603;318604 318602 2 SNSQVPQQSHFTK Unmodified 1486.7165 0.71645494 5045 Q9UNY4 TTF2 Transcription termination factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 24.613 20.524 3 0.016242 29294 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.116 38.197 55358000 32943000 19285000 3130200 0 0 0 0 0 0 0 0 0 0 0 0 48145 5045 43170 403824;403825;403826 318605 318605 0 SNSTRICNLTEEESSK Unmodified 1853.8425 0.84251967 3024 Q70CQ2 USP34 Ubiquitin carboxyl-terminal hydrolase 34 yes yes 0 0 1 By MS/MS 2 0 1 1 36.926 33.494 3 0.0060243 42189 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 46.249 36.965 8204700 0 0 8204700 0 0 0 0 0 0 0 0 0 0 0 0 48146 3024 43171 403827 318606 318606 1 SNSTSSMSSGLPEQDR Unmodified 1681.7213 0.7213419 1462 P42684 ABL2 Abelson tyrosine-protein kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 33.916 34.175 2 3.0054E-19 37179 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 106.17 100.45 51177000 0 0 0 0 4368300 4196300 4253600 0 0 5552200 7082700 4446500 7627400 4043800 9606500 48147 1462 43172 403828;403829;403830;403831;403832;403833;403834;403835;403836;403837 318607;318608;318609;318610;318611;318612;318613;318614;318615 318611 9 SNSTSSMSSGLPEQDR Oxidation (M) 1697.7163 0.71625652 1462 P42684 ABL2 Abelson tyrosine-protein kinase 2 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 20.922 21.185 2 8.8008E-05 22014 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 73.848 69.831 30479000 0 0 0 2583100 0 3668900 3864700 0 0 3947100 4716900 3368300 4621400 0 3708900 48148 1462 43172 403838;403839;403840;403841;403842;403843;403844;403845 318616;318617;318618;318619 318617 2293 4 SNSVEMDWVLK Unmodified 1306.6227 0.62273747 1773 P55795 HNRNPH2 Heterogeneous nuclear ribonucleoprotein H2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 80.357 79.418 2 0.00034474 91872 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 88.496 73.822 291300000 0 235960000 3859200 0 0 6732700 0 0 2442900 10874000 0 0 0 9419200 22017000 48149 1773 43173 403846;403847;403848;403849;403850;403851;403852;403853 318620;318621;318622;318623;318624;318625;318626 318620 7 SNTAGSQSQVETEA Unmodified 1407.6114 0.61138074 2080 Q02790 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.94 3.58 1 3 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20.783 20.191 2 2.5772E-22 21453 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 180.07 160.3 980400000 82030000 64977000 8182000 40448000 29861000 50457000 49198000 33250000 27956000 62153000 100280000 116030000 54578000 96046000 164950000 48150 2080 43174 403854;403855;403856;403857;403858;403859;403860;403861;403862;403863;403864;403865;403866;403867;403868;403869 318627;318628;318629;318630;318631;318632;318633;318634;318635;318636;318637;318638;318639;318640;318641 318638 15 SNTEQMREAFATAFSK Unmodified 1816.8414 0.84139745 712 O96006 ZBED1 Zinc finger BED domain-containing protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 80.219 72.088 3 0.022124 94592 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 33.872 19.081 10716000 10716000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48151 712 43175 403870 318642 318642 1 SNTHEFVNLVK Unmodified 1286.6619 0.66190017 498 O75436 VPS26A Vacuolar protein sorting-associated protein 26A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.2 3.92 9 6 4 2 3 1 1 1 1 1 1 55.582 52.8 2;3 8.0111E-45 73377 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 208.84 168.84 3317000000 1449400000 1009600000 688810000 0 0 0 11612000 18808000 0 0 22475000 29133000 0 19988000 67132000 48152 498 43176 403871;403872;403873;403874;403875;403876;403877;403878;403879;403880;403881;403882;403883;403884;403885 318643;318644;318645;318646;318647;318648;318649;318650;318651;318652;318653 318648 9 SNTNWVDITQDFEEACR Unmodified 2083.8905 0.89053249 2831 Q5VZE5 NAA35 N-alpha-acetyltransferase 35, NatC auxiliary subunit yes yes 0 0 0 By MS/MS 10 0 1 1 87.264 87.372 2 0.0010012 101328 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 51.875 46.268 1552600 0 0 0 0 0 0 0 0 0 1552600 0 0 0 0 0 48153 2831 43177 403886 318654 318654 1 SNTPESIAETPPAR Unmodified 1468.7158 0.71578623 5203 Q9Y4H2 IRS2 Insulin receptor substrate 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.905 41.083 2 3.1692E-12 45746 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 109.6 90.819 220760000 0 0 0 14212000 12318000 18118000 15028000 11799000 12048000 20812000 21051000 23429000 22067000 18295000 31579000 48154 5203 43178 403887;403888;403889;403890;403891;403892;403893;403894;403895;403896;403897;403898 318655;318656;318657;318658;318659;318660;318661;318662;318663;318664;318665;318666;318667;318668 318662 13 SNTPILVDGK Unmodified 1042.5659 0.56587452 829 P06744 GPI Glucose-6-phosphate isomerase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 40.115 40.767 2 0.0016946 44299 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.692 82.336 404790000 0 0 0 0 0 0 0 0 0 0 79325000 56589000 0 0 268880000 48155 829 43179 403899;403900;403901 318669;318670;318671;318672 318669 3 SNTPTPRNDAPTPGTSTTPGLR Unmodified 2237.1036 0.10363681 2104 Q04726 TLE3 Transducin-like enhancer protein 3 yes yes 0 0 1 By MS/MS 2 0 1 1 48.719 40.894 3 0.0038016 56789 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 34.009 24.593 3047300 3047300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48156 2104 43180 403902 318673 318673 1 SNTSPEELGPLANQLTSDYGR Unmodified 2248.0608 0.060768941 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.4 2.04 1 1 23 2 1 2 2 2 2 2 2 2 2 2 2 2 82.493 82.247 2;3 5.8393E-64 94932 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 173.03 165.48 311100000 0 29028000 0 1986000 9572500 25618000 11384000 15304000 11625000 36935000 23980000 30245000 12674000 30118000 72629000 48157 5187 43181 403903;403904;403905;403906;403907;403908;403909;403910;403911;403912;403913;403914;403915;403916;403917;403918;403919;403920;403921;403922;403923;403924;403925;403926;403927 318674;318675;318676;318677;318678;318679;318680;318681;318682;318683;318684;318685;318686 318678 12 SNTSPEELGPLANQLTSDYGRLASEAK Unmodified 2847.3886 0.38864502 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 93.998 89.931 3 6.1368E-15 110813 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.838 66.628 100130000 0 88812000 11317000 0 0 0 0 0 0 0 0 0 0 0 0 48158 5187 43182 403928;403929;403930 318687;318688 318687 2 SNTTVVPSTAGPGPSGGPGGGGGGGGGGGGTEVIQVTNVSPSASSEQMR Acetyl (Protein N-term);Oxidation (M) 4368.016 0.016026953 2115 Q05519 SRSF11 Serine/arginine-rich splicing factor 11 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 2 1 2 1 1 1 1 1 78.691 78.742 3;4 9.4196E-68 91251 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 71.406 67.332 259100000 0 0 0 0 32434000 22211000 40349000 0 26333000 43304000 0 43114000 18670000 0 32681000 48159 2115 43183 403931;403932;403933;403934;403935;403936;403937;403938;403939;403940 318689;318690;318691;318692;318693;318694;318695;318696;318697;318698 318697 3420 10 SNTTVVPSTAGPGPSGGPGGGGGGGGGGGGTEVIQVTNVSPSASSEQMR Acetyl (Protein N-term) 4352.0211 0.021112331 2115 Q05519 SRSF11 Serine/arginine-rich splicing factor 11 yes yes 1 0 0 By MS/MS By matching By matching By matching By matching By matching By MS/MS 10 0 9 2 1 1 1 1 1 2 80.556 80.606 3;4 2.9816E-113 93051 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.806 76.672 56827000 0 0 0 0 9221600 5156800 0 4103500 0 0 5150700 0 1023400 3414200 28756000 48160 2115 43183 403941;403942;403943;403944;403945;403946;403947;403948;403949 318699;318700;318701;318702 318699 4 SNVLLSFDDTPEK Unmodified 1463.7144 0.71438925 1602 P49815 TSC2 Tuberin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.048 76.109 2 6.8311E-08 87269 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 99.522 82.89 90972000 0 0 0 4384300 5459300 7223300 5328500 5823000 5378900 7849100 9249400 12701000 7118500 7664100 12793000 48161 1602 43184 403950;403951;403952;403953;403954;403955;403956;403957;403958;403959;403960;403961 318703;318704;318705;318706;318707;318708;318709;318710;318711;318712;318713;318714 318706 12 SNVLTGLQDSSTDNR Unmodified 1605.7594 0.75944196 134 O00257 CBX4 E3 SUMO-protein ligase CBX4 yes yes 0 0 0 By MS/MS 10 0 1 1 51.373 51.668 2 0.00032271 58644 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 66.498 44.505 5646500 0 0 0 0 0 0 0 0 0 0 0 0 5646500 0 0 48162 134 43185 403962 318715 318715 1 SNVPVETTDEIPFSFSDR Unmodified 2038.9484 0.94836495 4869 Q9UDY8 MALT1 Mucosa-associated lymphoid tissue lymphoma translocation protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 84.398 84.529 2 7.8976E-20 97918 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 109.83 98.889 24363000 0 0 0 0 0 0 0 0 0 7116400 0 5256500 0 4425300 7565100 48163 4869 43186 403963;403964;403965;403966;403967;403968;403969 318716;318717;318718;318719;318720;318721;318722 318717 7 SNVSDAVAQSTR Unmodified 1233.5949 0.59494282 1808 P60174 TPI1 Triosephosphate isomerase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 26.008 26.165 2 0.00045019 27214 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 79.693 62.855 980090000 0 0 0 108570000 11881000 8197800 9166700 14765000 4287600 9713100 263520000 308930000 14408000 226650000 0 48164 1808 43187 403970;403971;403972;403973;403974;403975;403976;403977;403978;403979;403980;403981 318723;318724;318725;318726;318727;318728;318729;318730;318731;318732;318733;318734;318735 318733 13 SNVSDAVAQSTRIIYGGSVTGATCK Unmodified 2541.2493 0.24931477 1808 P60174 TPI1 Triosephosphate isomerase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 3 2 1 82.594 77.505 2;3 5.1209E-119 97662 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 183.56 164.83 1350200000 1270900000 33006000 46324000 0 0 0 0 0 0 0 0 0 0 0 0 48165 1808 43188 403982;403983;403984;403985;403986;403987 318736;318737;318738;318739;318740;318741 318736 6 SNVSEERRK Acetyl (Protein N-term) 1145.5789 0.57889882 3243 Q8IWR0 ZC3H7A Zinc finger CCCH domain-containing protein 7A yes yes 1 0 2 By MS/MS 2 0 1 1 6.4247 4.2071 3 0.0053912 5982 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 55.549 26.076 16430000 0 0 16430000 0 0 0 0 0 0 0 0 0 0 0 0 48166 3243 43189 403988 318742 318742 1 SNVSSPATPTASSSSSTTPTRK Unmodified 2150.0451 0.045118877 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.451 23.655 3 3.9274E-34 24098 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 102.45 94.458 103050000 0 0 0 4683900 3654100 5754500 3570400 4525400 2525900 8055800 9481700 10986000 9770800 17397000 22645000 48167 2203 43190 403989;403990;403991;403992;403993;403994;403995;403996;403997;403998;403999;404000 318743;318744;318745;318746;318747;318748;318749;318750;318751;318752;318753;318754;318755 318747 13 SNVTSFQR Unmodified 937.46174 0.4617438 3807 Q96EB1 ELP4 Elongator complex protein 4 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 22.601 22.81 2 0.035078 23295 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 52.716 32.161 45439000 0 0 0 2502000 2451200 3800000 3232500 2124100 2769900 0 6468700 6101500 5036400 5227600 5725600 48168 3807 43191 404001;404002;404003;404004;404005;404006;404007;404008;404009;404010;404011 318756 318756 1 SNYEAMIDR Unmodified 1097.4812 0.48115861 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.549 45.718 2 0.02892 51298 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 48.794 35.746 159050000 0 0 0 6327400 7907800 11985000 6570300 11028000 9376500 12655000 18997000 20036000 12620000 17636000 23909000 48169 19 43192 404012;404013;404014;404015;404016;404017;404018;404019;404020;404021;404022;404023 318757 318757 1 SNYEAMIDR Oxidation (M) 1113.4761 0.47607323 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 28.366 28.569 2 0.024845 30534 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 45.161 28.958 75201000 0 0 0 3768600 5083000 5404200 5717200 0 0 9326200 10831000 12354000 7551300 8074300 7091100 48170 19 43192 404024;404025;404026;404027;404028;404029;404030;404031;404032;404033 318758;318759;318760 318758 3 SNYEVLEK Unmodified 980.48148 0.48147619 2114 Q05397 PTK2 Focal adhesion kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 6 4 2 2 1 1 1 1 35.923 33.097 2 0.012115 43081 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.43 65.035 303580000 4267200 67880000 0 0 0 0 0 0 88420000 143020000 0 0 0 0 0 48171 2114 43193 404034;404035;404036;404037 318761;318762;318763 318762 3 SNYICHK Unmodified 920.41744 0.41743614 455 O75116 ROCK2 Rho-associated protein kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 9.7545 6.6333 2 0.049729 9001 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 76.847 55.862 397210000 268480000 101590000 27137000 0 0 0 0 0 0 0 0 0 0 0 0 48172 455 43194 404038;404039;404040 318764 318764 1 SNYNFEK Unmodified 900.39775 0.39774656 1912 P62826 RAN GTP-binding nuclear protein Ran yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0.632 1 3 1 2 2 1 42.928 40.606 2 0.023639 28984 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 104.37 96.694 7948300000 390080000 7449600000 108600000 0 0 0 0 0 0 0 0 0 0 0 0 48173 1912 43195 404041;404042;404043;404044;404045 318765;318766;318767;318768 318768 4 SNYNLPMHK Oxidation (M) 1118.5179 0.51787847 1377 P36578 RPL4 60S ribosomal protein L4 yes yes 0 1 0 By MS/MS By matching By MS/MS 2 0 3 1 1 1 26.523 22.32 2 0.0050456 31426 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.01 94.019 76949000 55024000 17247000 4678000 0 0 0 0 0 0 0 0 0 0 0 0 48174 1377 43196 404046;404047;404048 318769;318770 318769 2136 2 SNYNLPMHK Unmodified 1102.523 0.52296385 1377 P36578 RPL4 60S ribosomal protein L4 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 39.448 34.392 2 0.01196 43546 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 84.498 61.069 75262000 67747000 0 7515100 0 0 0 0 0 0 0 0 0 0 0 0 48175 1377 43196 404049;404050 318771 318771 1 SNYQLGELVK Unmodified 1149.603 0.60298831 4923 Q9UIA9 XPO7 Exportin-7 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 62.684 62.746 2 0.011715 71752 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 53.751 23.158 10451000 0 0 0 0 0 4775500 0 0 0 5675100 0 0 0 0 0 48176 4923 43197 404051;404052 318772;318773 318772 2 SNYQVFQK Unmodified 1012.4978 0.49779495 2926 Q6P2C8 MED27 Mediator of RNA polymerase II transcription subunit 27 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 41.044 35.15 2 0.021606 38744 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 92.822 71.522 41540000 9420800 32120000 0 0 0 0 0 0 0 0 0 0 0 0 0 48177 2926 43198 404053;404054;404055;404056;404057;404058;404059;404060;404061 318774;318775;318776;318777;318778;318779;318780;318781 318777 8 SNYVPPPETYTTEK Unmodified 1624.7621 0.76206772 3360 Q8N6N3 C1orf52 UPF0690 protein C1orf52 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 48.031 48.491 2 0.034149 53884 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 31.228 17.8 46410000 0 0 0 0 0 0 0 0 0 9006700 8250100 11222000 0 6508000 11423000 48178 3360 43199 404062;404063;404064;404065;404066 318782;318783;318784 318783 3 SPAAALASSPSEGWLR Unmodified 1598.8053 0.80526994 2938 Q6P5Z2 PKN3 Serine/threonine-protein kinase N3 yes yes 0 0 0 By MS/MS 10 0 1 1 76.34 76.439 2 0.00054843 88222 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 86.288 73.855 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48179 2938 43200 404067 318785 318785 1 SPAAECLSEK Unmodified 1090.4965 0.49647433 2210 Q12931 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.734 20.943 2 0.00055012 21931 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 123.86 105.32 84404000 0 0 0 5984500 5226500 6964600 7004700 0 4100700 6341700 7988500 14135000 8195800 8585600 9876500 48180 2210 43201 404068;404069;404070;404071;404072;404073;404074;404075;404076;404077;404078;404079 318786;318787;318788;318789;318790;318791;318792;318793;318794;318795;318796;318797 318786 12 SPAAFHEQIK Unmodified 1126.5771 0.57710791 4995 Q9ULH7 MKL2 MKL/myocardin-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 30.16 29.059 2 0.00051551 30284 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 125.97 99.585 232530000 98717000 39620000 34177000 0 1923900 2877100 3761900 3513800 2726900 8469000 8176400 6495400 5611300 5250100 11206000 48181 4995 43202 404080;404081;404082;404083;404084;404085;404086;404087;404088;404089;404090;404091;404092;404093;404094 318798;318799;318800;318801;318802;318803;318804;318805;318806;318807;318808;318809;318810 318810 13 SPAAFHEQRR Unmodified 1197.6003 0.60030297 3728 Q969V6 MKL1 MKL/myocardin-like protein 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 8.3492 8.5157 3 0.0030218 6121 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.894 21.851 53529000 0 0 0 0 3062500 3533200 0 3156400 4226500 3834700 10856000 7346500 5296100 3737100 8479900 48182 3728 43203 404095;404096;404097;404098;404099;404100;404101;404102;404103;404104 318811;318812 318811 2 SPAAPYFLGSSFSPVR Unmodified 1681.8464 0.84640648 1275 P30291 WEE1 Wee1-like protein kinase yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 85.765 85.867 2 1.9428E-05 99394 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.959 76.095 25927000 0 0 0 0 3245800 3176500 2382500 3829400 2692400 0 4819600 5780800 0 0 0 48183 1275 43204 404105;404106;404107;404108;404109;404110;404111;404112;404113 318813;318814;318815;318816;318817;318818;318819;318820 318816 8 SPAFTSR Unmodified 764.3817 0.38170256 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 16.079 16.225 2 0.023356 16121 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 89.55 35.025 166390000 0 0 0 9498500 8990300 12995000 13534000 11255000 10749000 17879000 23491000 18866000 16947000 22182000 0 48184 3119 43205 404114;404115;404116;404117;404118;404119;404120;404121;404122;404123;404124 318821;318822;318823 318822 3 SPAFVQLAPLSSK Unmodified 1343.7449 0.74490152 1663 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.129 79.188 2 6.8198E-52 91525 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 184.03 153.46 869120000 0 0 0 41746000 42194000 54583000 58318000 87920000 54138000 77903000 88350000 101830000 75401000 70165000 116580000 48185 1663 43206 404125;404126;404127;404128;404129;404130;404131;404132;404133;404134;404135;404136 318824;318825;318826;318827;318828;318829;318830;318831;318832;318833;318834;318835 318833 12 SPAGGESATVAAK Unmodified 1144.5724 0.57241646 2448 Q147X3 NAA30 N-alpha-acetyltransferase 30 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 14.35 14.507 2 2.8981E-22 13811 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 158.05 133.27 350650000 0 0 0 11560000 15840000 16215000 4186800 4551200 3086200 64546000 97115000 128000000 0 1792700 3759800 48186 2448 43207 404137;404138;404139;404140;404141;404142;404143;404144;404145;404146;404147 318836;318837;318838;318839;318840;318841;318842 318842 5 SPAGLQVLNDYLADK Unmodified 1602.8253 0.82533668 1174 P24534 EEF1B2 Elongation factor 1-beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.95 3.75 5 3 12 2 4 2 1 1 1 1 1 1 1 1 1 1 1 1 87.477 86.244 2;3 1.1493E-168 100246 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 220.53 195.14 2118100000 884370000 372420000 279470000 4003600 14993000 40451000 15299000 20290000 18349000 60282000 72390000 61731000 13884000 45518000 214620000 48187 1174 43208 404148;404149;404150;404151;404152;404153;404154;404155;404156;404157;404158;404159;404160;404161;404162;404163;404164;404165;404166;404167 318843;318844;318845;318846;318847;318848;318849;318850;318851;318852;318853;318854;318855;318856;318857;318858;318859;318860;318861;318862;318863;318864;318865;318866;318867;318868;318869;318870;318871;318872 318844 28 SPAGPAATPAQAQAASTPR Unmodified 1748.8806 0.88056015 2289 Q13428 TCOF1 Treacle protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 35.605 35.788 2;3 2.0658E-83 39471 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 192.65 170.42 287640000 0 0 0 21525000 16359000 16573000 19483000 20218000 12189000 23285000 34531000 38800000 24873000 22402000 37406000 48188 2289 43209 404168;404169;404170;404171;404172;404173;404174;404175;404176;404177;404178;404179;404180;404181;404182;404183;404184;404185;404186;404187;404188;404189;404190;404191 318873;318874;318875;318876;318877;318878;318879;318880;318881;318882;318883;318884;318885;318886;318887;318888;318889;318890 318885 14 SPAGPAATPAQAQAASTPRK Unmodified 1876.9755 0.97552317 2289 Q13428 TCOF1 Treacle protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 28.324 28.453 3 1.3155E-07 29832 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.053 30.547 47798000 0 0 0 3556200 3772200 3004300 4117800 2124000 2597800 4084800 10584000 0 0 5087700 8869700 48189 2289 43210 404192;404193;404194;404195;404196;404197;404198;404199;404200;404201 318891;318892;318893;318894;318895;318896;318897;318898 318893 8 SPAGSIVHELNPNFQPPK Unmodified 1930.9901 0.9901106 366 O43776 NARS Asparagine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.12 0.331 7 1 3 3 2 81.481 76.191 2;3 3.0002E-53 97158 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 119.4 110.74 1170900000 819120000 269650000 82176000 0 0 0 0 0 0 0 0 0 0 0 0 48190 366 43211 404202;404203;404204;404205;404206;404207;404208;404209 318899;318900;318901;318902;318903;318904;318905;318906;318907;318908 318902 9 SPAGSPELR Unmodified 912.46649 0.46649483 3897 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 0 0 0 By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 20.251 20.435 2 0.016766 20692 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 56.258 36.412 75108000 0 0 0 9734100 7891700 0 5726100 0 4838900 10242000 7963800 16128000 6007400 6576000 0 48191 3897 43212 404210;404211;404212;404213;404214;404215;404216;404217;404218 318909;318910;318911 318909 3 SPAGSQQQFGYSPGQQQTHPQGSPR Unmodified 2654.2222 0.22218882 3474 Q8TAP9 MPLKIP M-phase-specific PLK1-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 39.273 39.439 3 4.969E-96 43855 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 127.38 123.73 113920000 0 0 0 9756200 5437600 7687700 9248000 0 9606300 14479000 13925000 12205000 0 9296100 22282000 48192 3474 43213 404219;404220;404221;404222;404223;404224;404225;404226;404227;404228 318912;318913;318914;318915;318916;318917;318918;318919;318920;318921;318922;318923 318913 12 SPAHLSLIR Unmodified 992.57671 0.57671398 578 O76094 SRP72 Signal recognition particle subunit SRP72 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 43.62 43.779 2 0.0031867 47790 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 133.12 95.593 123400000 0 0 0 18353000 12064000 0 0 12573000 0 13189000 0 23751000 22836000 0 20634000 48193 578 43214 404229;404230;404231;404232;404233;404234;404235 318924;318925;318926 318926 3 SPAIFGVLTK Unmodified 1031.6015 0.60153174 2310 Q13535 ATR Serine/threonine-protein kinase ATR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 79.705 79.792 2 0.0041248 91409 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 73.985 60.948 34549000 0 0 0 0 2343500 3997700 2314100 4250300 2304800 4345200 0 0 3614900 3950300 7427700 48194 2310 43215 404236;404237;404238;404239;404240;404241;404242;404243;404244 318927;318928;318929;318930;318931;318932;318933;318934;318935 318933 9 SPAITATLEGK Unmodified 1086.5921 0.59208927 3481 Q8TBC4 UBA3 NEDD8-activating enzyme E1 catalytic subunit yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 55.032 49.685 2 0.0019011 64361 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.97 60.545 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48195 3481 43216 404245;404246 318936;318937 318936 2 SPALSDANK Unmodified 901.45051 0.45051041 1694 P52701 MSH6 DNA mismatch repair protein Msh6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 2 1 1 1 1 1 12.946 12.367 2 0.00048382 14582 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.46 64.803 627070000 30738000 448390000 0 0 9669600 14477000 13662000 9048200 11584000 26606000 14654000 16273000 13581000 7013600 11369000 48196 1694 43217 404247;404248;404249;404250;404251;404252;404253;404254;404255;404256;404257;404258;404259;404260;404261 318938;318939;318940;318941;318942;318943;318944;318945;318946;318947;318948 318941 10 SPAPEQFQSR Unmodified 1145.5465 0.54653606 4798 Q9P0V3 SH3BP4 SH3 domain-binding protein 4 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 27.473 27.51 2 0.013776 29763 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 51.066 42.153 8087200 0 0 0 0 2630500 0 0 1709000 0 0 0 0 0 3747600 0 48197 4798 43218 404262;404263;404264 318949 318949 1 SPAPGAPTR Unmodified 852.44537 0.44536545 4096 Q9BQG0 MYBBP1A Myb-binding protein 1A yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 2 2 1 1 1 1 2 12.64 12.832 2 0.0069711 10512 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 73.665 33.562 50580000 0 0 0 0 1870300 2080300 1919000 2485900 4694500 7599800 3807200 6990900 6781400 5323900 7026600 48198 4096 43219 404265;404266;404267;404268;404269;404270;404271;404272;404273;404274;404275;404276;404277;404278 318950;318951;318952;318953;318954 318954 5 SPAPGAPTRSPSTPAK Unmodified 1520.7947 0.79470526 4096 Q9BQG0 MYBBP1A Myb-binding protein 1A yes yes 0 0 1 By MS/MS 2 0 1 1 25.2 20.123 3 0.041503 28512 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 29.723 15.817 35902000 35902000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48199 4096 43220 404279 318955 318955 1 SPAPGLASGDRPPSVSSVHSEGDCNR Unmodified 2635.2045 0.20448984 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 0 1 By MS/MS 10 0 1 1 44.052 44.794 4 0.037112 49316 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 23.246 19.718 14763000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14763000 48200 5262 43221 404280 318956 318956 0 SPAPKPSDLRPGDVSSK Unmodified 1736.9057 0.90571227 2117 Q05682 CALD1 Caldesmon yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.87 3.54 4 11 2 2 1 1 1 1 1 1 1 1 1 1 1 35.303 34.101 3;4 2.072E-53 37003 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 142.39 120.97 448420000 260120000 0 21413000 10034000 9466800 0 7774600 9932100 5482700 12166000 27152000 33303000 18229000 14205000 19150000 48201 2117 43222 404281;404282;404283;404284;404285;404286;404287;404288;404289;404290;404291;404292;404293;404294;404295 318957;318958;318959;318960;318961;318962;318963;318964;318965;318966;318967;318968;318969;318970 318962 12 SPAPPLLHVAALGQK Unmodified 1497.8667 0.86674799 3308 Q8N163 CCAR2 Cell cycle and apoptosis regulator protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.89 2.72 3 1 24 1 2 1 2 2 2 2 2 2 2 2 2 2 2 2 75.541 74.926 2;3 5.7115E-11 85682 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 97.716 85.74 1268800000 183860000 77368000 14734000 42575000 48923000 85611000 56084000 68908000 64889000 83893000 91978000 123440000 68749000 95315000 162470000 48202 3308 43223 404296;404297;404298;404299;404300;404301;404302;404303;404304;404305;404306;404307;404308;404309;404310;404311;404312;404313;404314;404315;404316;404317;404318;404319;404320;404321;404322;404323 318971;318972;318973;318974;318975;318976;318977;318978;318979;318980;318981;318982;318983;318984;318985;318986;318987 318978 14 SPAPSSGMPSSPVPTPPPDASPIPAPGDPSEAEAR Unmodified 3349.5773 0.57725043 3931 Q96N21 ENTHD2 AP-4 complex accessory subunit tepsin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.243 80.302 3 4.5236E-26 93250 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 53.1 37.086 117990000 0 0 0 3338000 6244200 6621800 5683300 12320000 6766900 11673000 10245000 15280000 7636500 13904000 18278000 48203 3931 43224 404324;404325;404326;404327;404328;404329;404330;404331;404332;404333;404334;404335 318988;318989;318990;318991;318992;318993;318994;318995;318996;318997;318998;318999;319000;319001;319002;319003 318998 16 SPAPSSGMPSSPVPTPPPDASPIPAPGDPSEAEAR Oxidation (M) 3365.5722 0.57216505 3931 Q96N21 ENTHD2 AP-4 complex accessory subunit tepsin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 76.846 76.954 3 1.3393E-33 88766 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 63.033 61.151 138990000 0 0 0 0 16558000 0 0 14510000 0 15898000 18084000 29284000 15925000 14698000 14036000 48204 3931 43224 404336;404337;404338;404339;404340;404341;404342;404343 319004;319005;319006;319007;319008;319009;319010;319011 319004 5421 8 SPAQILQWQVLSNTVPAK Unmodified 1979.084 0.084010986 62 CON__P02668 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 89.574 89.714 3 0.0064399 104200 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 31.462 22.643 + 5728100 0 0 0 0 0 1680100 2174800 1873200 0 0 0 0 0 0 0 48205 62 43225 404344;404345;404346 319012 319012 1 SPAQYQVVLSER Unmodified 1375.7096 0.70957864 2991 Q6XQN6 NAPRT Nicotinate phosphoribosyltransferase yes yes 0 0 0 By MS/MS By matching By MS/MS By matching 10 0 4 1 1 1 1 59.019 59.347 2 0.0017273 66655 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 65.5 52.545 25135000 0 0 0 0 0 0 0 0 0 0 0 0 3328100 5674900 16132000 48206 2991 43226 404347;404348;404349;404350 319013;319014 319013 2 SPASCHEHPMADDPSK Unmodified 1764.7196 0.71956776 4223 Q9BXB5 OSBPL10 Oxysterol-binding protein-related protein 10 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 12.361 12.638 3 0.032387 11498 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 16.173 15.104 2449200 0 0 0 0 0 0 0 990380 0 0 0 1458800 0 0 0 48207 4223 43227 404351;404352 319015 319015 1 SPASDTYIVFGEAK Unmodified 1483.7195 0.71947463 112 Q13765;E9PAV3 NACA Nascent polypeptide-associated complex subunit alpha;Nascent polypeptide-associated complex subunit alpha, muscle-specific form yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.82 3.57 1 7 1 24 2 5 2 2 2 2 2 2 2 2 2 2 2 2 2 74.825 74.078 2;3 1.8255E-85 82812 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 229.29 207.3 7575900000 288240000 4063600000 273950000 155360000 181050000 161590000 168690000 223890000 139590000 240210000 384560000 373690000 166230000 222830000 532400000 48208 112 43228 404353;404354;404355;404356;404357;404358;404359;404360;404361;404362;404363;404364;404365;404366;404367;404368;404369;404370;404371;404372;404373;404374;404375;404376;404377;404378;404379;404380;404381;404382;404383;404384;404385 319016;319017;319018;319019;319020;319021;319022;319023;319024;319025;319026;319027;319028;319029;319030;319031;319032;319033;319034;319035;319036;319037;319038;319039;319040;319041;319042;319043;319044;319045;319046;319047;319048;319049;319050 319041 28 SPASFEIPASAMEANGVDGDGLNK Oxidation (M) 2392.0853 0.085269132 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 77.932 73.855 3 2.1324E-82 91882 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 144.57 136.16 29643000 0 29643000 0 0 0 0 0 0 0 0 0 0 0 0 0 48209 645 43229 404386;404387 319051;319052 319051 785 2 SPASFEIPASAMEANGVDGDGLNK Unmodified 2376.0904 0.09035451 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 0 0 By MS/MS 2.5 0.5 2 2 4 84.583 80.585 2;3 1.6642E-38 100097 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.78 106.25 106490000 0 106490000 0 0 0 0 0 0 0 0 0 0 0 0 0 48210 645 43229 404388;404389;404390;404391 319053;319054;319055;319056 319053 4 SPATSPISSNSHR Unmodified 1339.648 0.64804102 4584 Q9NR09 BIRC6 Baculoviral IAP repeat-containing protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 14.865 15.147 3 0.00027264 14266 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 58.595 46.098 41545000 0 0 0 0 0 0 7942800 0 0 7000400 9783200 0 0 0 16819000 48211 4584 43230 404392;404393;404394;404395 319057;319058 319058 2 SPAVATSTAAPPPPSSPLPSK Unmodified 1959.0313 0.031306713 2380 Q14157 UBAP2L Ubiquitin-associated protein 2-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.62 1.8 1 23 1 2 1 2 2 2 2 2 2 2 2 2 2 60.42 60.775 2;3 3.6461E-174 65740 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 205.61 182.38 1971600000 21621000 0 0 106160000 55594000 125710000 180730000 128340000 154010000 176310000 240850000 182360000 185080000 160340000 254490000 48212 2380 43231 404396;404397;404398;404399;404400;404401;404402;404403;404404;404405;404406;404407;404408;404409;404410;404411;404412;404413;404414;404415;404416;404417;404418;404419 319059;319060;319061;319062;319063;319064;319065;319066;319067;319068;319069;319070;319071;319072;319073;319074;319075 319070 15 SPAVKPAAAPK Unmodified 1035.6077 0.60767975 2458 Q14978 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 13.304 13.581 2 0.035788 12828 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 74.92 50.965 24901000 0 0 0 0 0 0 0 0 0 8144100 0 16756000 0 0 0 48213 2458 43232 404420;404421 319076;319077 319076 0 SPAYTPQNLDSESESGSSIAEK Unmodified 2296.0343 0.034279419 2558 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 55.634 55.765 2 6.3947E-20 62798 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 99.566 87.005 42332000 0 0 0 2167000 1970600 0 2732300 4462700 2241600 4843100 4996200 5533800 4591000 3433800 5360100 48214 2558 43233 404422;404423;404424;404425;404426;404427;404428;404429;404430;404431;404432 319078;319079;319080;319081;319082;319083;319084 319079 7 SPCETISSPSSTLESK Unmodified 1708.7825 0.78254517 4288 Q9C0D5 TANC1 Protein TANC1 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 45.99 46.481 2 2.2583E-07 51285 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.288 77.184 7937500 0 0 0 0 0 0 0 0 0 0 0 0 0 2646200 5291400 48215 4288 43234 404433;404434 319085 319085 1 SPCNNGFK Unmodified 922.3967 0.3967007 2835 Q5W0B1 RNF219 RING finger protein 219 yes yes 0 0 0 By MS/MS 2 0 1 1 11.846 8.5676 2 0.023451 11781 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.386 65.459 10654000 0 10654000 0 0 0 0 0 0 0 0 0 0 0 0 0 48216 2835 43235 404435 319086 319086 1 SPDCPVCSR Unmodified 1076.4379 0.43791359 3055 Q7L5Y9 MAEA Macrophage erythroblast attacher yes yes 0 0 0 By MS/MS 2 0 1 1 15.359 12.018 2 0.0066693 15960 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.87 87.728 35470000 0 35470000 0 0 0 0 0 0 0 0 0 0 0 0 0 48217 3055 43236 404436 319087 319087 1 SPDDPARHITGEK Unmodified 1421.6899 0.68990583 991 P13929 ENO3 Beta-enolase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 2 3 2 23.603 19.617 2;3 2.5939E-40 25033 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 191.79 144.6 391940000 44371000 79903000 267660000 0 0 0 0 0 0 0 0 0 0 0 0 48218 991 43237 404437;404438;404439;404440;404441;404442;404443 319088;319089;319090;319091;319092;319093;319094 319094 7 SPDDPSR Unmodified 772.33515 0.3351463 827 P06733 ENO1 Alpha-enolase yes yes 0 0 0 By MS/MS 1 0 1 1 106.78 112.05 2 0.020378 92788 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 112.59 88.407 39579000 39579000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48219 827 43238 404444 319095 319095 1 SPDDPSRYISPDQLADLYK Unmodified 2179.0433 0.043327963 827 P06733 ENO1 Alpha-enolase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2.98 2.53 5 33 10 6 15 24 9 1 1 1 1 1 1 91.838 88.926 2;3;4 0 102226 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 276.63 253.74 34406000000 8278700000 23619000000 2039900000 1422600 0 0 0 0 0 3068200 25926000 28751000 0 31558000 377680000 48220 827 43239 404445;404446;404447;404448;404449;404450;404451;404452;404453;404454;404455;404456;404457;404458;404459;404460;404461;404462;404463;404464;404465;404466;404467;404468;404469;404470;404471;404472;404473;404474;404475;404476;404477;404478;404479;404480;404481;404482;404483;404484;404485;404486;404487;404488;404489;404490;404491;404492;404493;404494;404495;404496;404497;404498 319096;319097;319098;319099;319100;319101;319102;319103;319104;319105;319106;319107;319108;319109;319110;319111;319112;319113;319114;319115;319116;319117;319118;319119;319120;319121;319122;319123;319124;319125;319126;319127;319128;319129;319130;319131;319132;319133;319134;319135;319136;319137;319138;319139;319140;319141;319142;319143;319144;319145;319146;319147;319148;319149;319150;319151;319152;319153 319099 53 SPDELPSAGGDGGK Unmodified 1285.5786 0.57862405 417 O60610 DIAPH1 Protein diaphanous homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 27.845 28.358 2 0.0035858 30113 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 71.153 65.843 19516000 0 0 0 0 0 0 0 0 0 5629000 0 6634000 0 0 7252600 48221 417 43240 404499;404500;404501;404502 319154;319155;319156 319156 2 SPDEVLREGELEK Unmodified 1499.7468 0.74675201 2701 Q53GA4 PHLDA2 Pleckstrin homology-like domain family A member 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 49.779 49.151 3 4.5183E-08 54319 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.507 57.981 406090000 0 50527000 0 24088000 21438000 25348000 23455000 28334000 26865000 21898000 40384000 43236000 33903000 29697000 36913000 48222 2701 43241 404503;404504;404505;404506;404507;404508;404509;404510;404511;404512;404513;404514;404515;404516 319157;319158;319159;319160;319161;319162;319163;319164;319165;319166;319167;319168;319169 319161 12 SPDFHEEIK Unmodified 1100.5138 0.51383895 3933 Q96N67 DOCK7 Dedicator of cytokinesis protein 7 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 33.329 33.377 2 0.012756 35883 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.828 35.254 35077000 0 0 0 3557100 3608700 4199300 2788800 2957100 3820900 5643600 0 8501000 0 0 0 48223 3933 43242 404517;404518;404519;404520;404521;404522;404523;404524 319170;319171;319172;319173 319173 4 SPDFTNENPLETR Unmodified 1518.6951 0.69505079 792 P05023 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 0 0 0 By MS/MS 10 0 1 1 63.092 63.559 2 0.012362 72543 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 75.849 42.625 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48224 792 43243 404525 319174 319174 1 SPDGAHLTWEPPSVTSGK Unmodified 1864.8955 0.89554151 1663 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.81 2.8 3 1 22 1 2 1 1 2 2 1 2 2 2 2 2 2 2 2 67.733 67.019 2;3 1.1635E-40 76542 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 144.47 133.86 956240000 37414000 230360000 88799000 18598000 31202000 54347000 28115000 52917000 38424000 52920000 55637000 57150000 57163000 49063000 104130000 48225 1663 43244 404526;404527;404528;404529;404530;404531;404532;404533;404534;404535;404536;404537;404538;404539;404540;404541;404542;404543;404544;404545;404546;404547;404548;404549;404550;404551 319175;319176;319177;319178;319179;319180;319181;319182;319183;319184;319185;319186;319187;319188;319189;319190;319191;319192;319193;319194;319195;319196;319197;319198;319199;319200 319197 25 SPDGPVLSK Unmodified 898.476 0.47599688 3745 Q96AY4 TTC28 Tetratricopeptide repeat protein 28 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching 10 0 5 1 1 1 1 1 23.533 23.728 2 0.025904 24895 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 50.04 32.479 13798000 0 0 0 0 0 2381100 2623800 1613400 0 3013500 0 0 0 0 4165900 48226 3745 43245 404552;404553;404554;404555;404556 319201 319201 1 SPDGRTYYYNTETK Unmodified 1693.7584 0.75837933 494 O75400 PRPF40A Pre-mRNA-processing factor 40 homolog A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 34.25 29.528 3 0.0025288 37587 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 63.29 52.344 77318000 7379400 50032000 19907000 0 0 0 0 0 0 0 0 0 0 0 0 48227 494 43246 404557;404558;404559;404560 319202;319203;319204 319204 2 SPDHIQLNSK Unmodified 1137.5778 0.57783619 3210 Q86YS6 RAB43 Ras-related protein Rab-43 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 21.278 21.503 3 0.011386 21847 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 50.385 31.945 53607000 0 0 0 2405500 3233900 0 4040300 3016900 4289800 4037800 6834500 6865900 7391600 5454700 6035600 48228 3210 43247 404561;404562;404563;404564;404565;404566;404567;404568;404569;404570;404571 319205 319205 1 SPDLAPTPAPQSTPR Unmodified 1533.7787 0.77872084 4242 Q9BY44 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 45.966 45.359 2 9.6811E-15 50676 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 103.35 79.995 190580000 0 45984000 0 7200700 4863800 13006000 8112100 6107900 3534900 11659000 17920000 17828000 10172000 15263000 28932000 48229 4242 43248 404572;404573;404574;404575;404576;404577;404578;404579;404580;404581;404582;404583;404584;404585 319206;319207;319208;319209;319210;319211;319212;319213;319214;319215;319216;319217;319218;319219;319220 319218 15 SPDLAPTPAPQSTPRNTVSQSISGDPEIDK Unmodified 3104.5262 0.52620113 4242 Q9BY44 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 72.97 66.008 3 2.8755E-12 84787 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 61.499 53.103 29419000 5070700 24348000 0 0 0 0 0 0 0 0 0 0 0 0 0 48230 4242 43249 404586;404587 319221;319222 319221 2 SPDLAPTPAPQSTPRNTVSQSISGDPEIDKK Unmodified 3232.6212 0.62116415 4242 Q9BY44 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed yes yes 0 0 2 By MS/MS 2 0 1 1 64.987 61.231 4 2.1773E-10 75855 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 51.851 45.756 47863000 0 0 47863000 0 0 0 0 0 0 0 0 0 0 0 0 48231 4242 43250 404588 319223 319223 1 SPDLLMYQGPPDTAEIIK Oxidation (M) 2002.9921 0.99214402 2001 P82909 MRPS36 28S ribosomal protein S36, mitochondrial yes yes 0 1 0 By MS/MS 2 0 1 1 87.649 82.84 2 0.0021401 102985 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 54.199 39.78 12643000 0 12643000 0 0 0 0 0 0 0 0 0 0 0 0 0 48232 2001 43251 404589 319224 319224 3248 1 SPDLLMYQGPPDTAEIIK Unmodified 1986.9972 0.99722939 2001 P82909 MRPS36 28S ribosomal protein S36, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 90.966 86.07 2 1.8965E-27 106896 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 171.99 143.02 25834000 0 25834000 0 0 0 0 0 0 0 0 0 0 0 0 0 48233 2001 43251 404590 319225 319225 1 SPDNPMNQR Unmodified 1057.4611 0.46109187 3784 Q96CT7 CCDC124 Coiled-coil domain-containing protein 124 yes yes 0 0 0 By MS/MS 10 0 1 1 17.371 17.656 2 0.037906 16782 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 45.081 19.522 1411200 0 0 0 0 0 0 0 0 0 0 0 0 0 1411200 0 48234 3784 43252 404591 319226 319226 1 SPDPFGAVAAQK Unmodified 1186.5982 0.59823728 5172 Q9Y3Q8 TSC22D4 TSC22 domain family protein 4 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 2 1 55.922 56.055 2 0.0046344 63596 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 56.916 34.135 49421000 0 0 0 3076500 2004400 3297900 0 4058600 1607600 0 5373700 9420600 4517400 5700300 10364000 48235 5172 43253 404592;404593;404594;404595;404596;404597;404598;404599;404600;404601;404602 319227;319228;319229;319230;319231;319232;319233;319234;319235 319231 9 SPDPGIVPQEAPVGNSLSELSEENFDGK Unmodified 2911.3723 0.37232625 242 O15027 SEC16A Protein transport protein Sec16A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 85.975 86.084 3 1.986E-109 99643 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 140.09 137.37 71164000 0 0 0 0 4044700 0 0 7705100 4416100 14858000 8827100 11995000 0 0 19319000 48236 242 43254 404603;404604;404605;404606;404607;404608;404609 319236;319237;319238;319239;319240;319241;319242;319243;319244 319237 9 SPDRLADINYEGR Unmodified 1504.727 0.72701962 1707 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 47.399 47.533 3 0.0023744 53166 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 53.3 44.701 92585000 0 0 0 6247700 6676600 7643700 7488300 0 0 10918000 0 19975000 7192400 10798000 15645000 48237 1707 43255 404610;404611;404612;404613;404614;404615;404616;404617;404618 319245;319246;319247;319248;319249;319250 319250 4 SPDSDVAATLK Unmodified 1102.5506 0.55061839 437 O60841 EIF5B Eukaryotic translation initiation factor 5B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 3 1 1 1 1 1 1 1 1 1 1 1 1 39.305 38.797 2 2.421E-09 43222 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 139.38 94.935 715850000 0 350320000 0 21048000 16157000 35792000 28773000 18461000 22961000 36171000 43993000 39688000 35873000 22173000 44434000 48238 437 43256 404619;404620;404621;404622;404623;404624;404625;404626;404627;404628;404629;404630;404631;404632;404633 319251;319252;319253;319254;319255;319256;319257;319258;319259;319260;319261;319262;319263 319257 8 SPDSDVAATLKK Unmodified 1230.6456 0.6455814 437 O60841 EIF5B Eukaryotic translation initiation factor 5B yes yes 0 0 1 By MS/MS 3 0 1 1 36.749 32.179 3 0.00055104 40207 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 74.611 64.606 10231000 0 10231000 0 0 0 0 0 0 0 0 0 0 0 0 0 48239 437 43257 404634 319264 319264 0 SPDSVLVTASVK Unmodified 1201.6554 0.65541781 117 O00141 SGK1 Serine/threonine-protein kinase Sgk1 yes yes 0 0 0 By MS/MS 2 0 1 1 61.197 55.322 2 3.2155E-05 71114 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.69 87.395 26356000 0 26356000 0 0 0 0 0 0 0 0 0 0 0 0 0 48240 117 43258 404635 319265 319265 1 SPDTILQK Unmodified 900.49165 0.49164694 1099 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 0 0 0 By MS/MS 2 0 1 1 34.205 29.561 2 0.0062755 39091 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 139.68 64.411 3481900000 0 3481900000 0 0 0 0 0 0 0 0 0 0 0 0 0 48241 1099 43259 404636 319266 319266 1 SPDTNYLFMGDYVDR Oxidation (M) 1807.7723 0.77231483 1954;1906 P67775;P62714 PPP2CA;PPP2CB Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform;Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.227 76.285 2 1.8724E-41 88095 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 160.15 145.99 106250000 0 0 0 4225600 5296600 7044900 4298300 4342300 4155500 9189500 11975000 17459000 5573400 8470600 24219000 48242 1954;1906 43260 404637;404638;404639;404640;404641;404642;404643;404644;404645;404646;404647;404648 319267;319268;319269;319270;319271;319272;319273;319274;319275;319276;319277 319275 3082 11 SPDTNYLFMGDYVDR Unmodified 1791.7774 0.77740021 1954;1906 P67775;P62714 PPP2CA;PPP2CB Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform;Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform no no 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 83.255 83.404 2 4.3786E-35 96187 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 153.38 146.85 26369000 0 0 0 0 0 0 0 0 0 0 0 0 0 4124800 22244000 48243 1954;1906 43260 404649;404650 319278;319279 319278 2 SPDVGLYGVIPECGETYHSDLAEAK Unmodified 2706.2483 0.24831171 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.617 80.677 3 3.7999E-08 93088 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.844 43.446 778120000 0 0 0 8162300 25203000 82473000 18855000 49342000 42386000 132460000 67275000 74713000 23310000 52006000 201930000 48244 1518 43261 404651;404652;404653;404654;404655;404656;404657;404658;404659;404660;404661;404662 319280 319280 0 SPEASQTDSPVESPR Unmodified 1585.722 0.72199382 616 O95049 TJP3 Tight junction protein ZO-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 27.569 27.659 2 9.0949E-19 29798 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 107.09 100.43 7837400 0 0 0 0 0 0 2846500 0 0 4990900 0 0 0 0 0 48245 616 43262 404663;404664;404665;404666;404667;404668;404669 319281;319282;319283;319284;319285;319286;319287 319281 7 SPEDHIGAVLER Unmodified 1321.6626 0.66262845 2345 Q13823 GNL2 Nucleolar GTP-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 51.124 51.415 3 0.0070906 57338 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 40.751 33.55 97012000 0 0 0 0 0 10605000 0 0 9897200 11589000 14936000 15494000 20314000 14177000 0 48246 2345 43263 404670;404671;404672;404673;404674;404675;404676;404677 319288;319289;319290 319290 3 SPEDLER Unmodified 844.39266 0.39266118 829;3309 P06744;Q8N196 GPI;SIX5 Glucose-6-phosphate isomerase;Homeobox protein SIX5 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 15.481 15.125 2 0.015825 14429 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 117.18 46.461 795650000 0 177340000 0 6896600 4470000 5817100 7482000 5600800 4239100 7292000 118280000 75665000 14245000 95872000 272450000 48247 829;3309 43264 404678;404679;404680;404681;404682;404683;404684;404685;404686;404687;404688;404689;404690;404691 319291;319292;319293;319294;319295 319293 5 SPEDLERLLPHK Unmodified 1432.7674 0.76742787 829 P06744 GPI Glucose-6-phosphate isomerase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.14 0.639 1 4 2 4 2 1 82.105 78.409 2;3 0.00015477 92919 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.326 47.702 1746500000 1596700000 101520000 48344000 0 0 0 0 0 0 0 0 0 0 0 0 48248 829 43265 404692;404693;404694;404695;404696;404697;404698 319296;319297;319298;319299;319300;319301;319302;319303;319304;319305;319306 319304 8 SPEEGAETPVYLALLPPDAEGPHGQFVSEK Unmodified 3163.535 0.53497491 1033 P16152 CBR1 Carbonyl reductase [NADPH] 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.43 3.96 4 3 1 2 1 1 1 1 92.118 89.284 3;4 3.1397E-51 112160 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.51 97.05 600180000 24477000 451460000 90202000 0 0 0 0 0 0 2151000 3643300 0 0 0 28249000 48249 1033 43266 404699;404700;404701;404702;404703;404704;404705 319307;319308;319309;319310;319311;319312;319313;319314;319315;319316 319309 10 SPEELAALVK Unmodified 1055.5863 0.58627561 3652 Q92696 RABGGTA Geranylgeranyl transferase type-2 subunit alpha yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 75.654 71.445 1;2 0.0033765 89209 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.605 62.21 331680000 0 323220000 8458000 0 0 0 0 0 0 0 0 0 0 0 0 48250 3652 43267 404706;404707;404708 319317;319318 319317 1 SPEELEQGQVDIYGPK Unmodified 1787.8578 0.85775902 2674 Q3MJ16 PLA2G4E Cytosolic phospholipase A2 epsilon yes yes 0 0 0 By MS/MS 10 0 1 1 65.496 64.803 2 0.0041063 74888 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 56.225 44.359 2916700 0 0 0 2916700 0 0 0 0 0 0 0 0 0 0 0 48251 2674 43268 404709 319319 319319 1 SPEELESAVEEMK Unmodified 1476.6654 0.66539015 1517 P46939 UTRN Utrophin yes yes 0 0 0 By MS/MS 2 0 1 1 77.035 72.197 2 0.021718 90125 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 50.786 35.124 18035000 0 18035000 0 0 0 0 0 0 0 0 0 0 0 0 0 48252 1517 43269 404710 319320 319320 1 SPEEMRQQAHIQVVSK Unmodified 1865.9418 0.9417802 217 O14802 POLR3A DNA-directed RNA polymerase III subunit RPC1 yes yes 0 0 1 By MS/MS 2 0 1 1 44.836 37.971 3 0.00026802 52039 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.341 56.448 16463000 16463000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48253 217 43270 404711 319321 319321 1 SPEEMYIQQK Oxidation (M) 1267.5755 0.57545293 4623 Q9NSA3 CTNNBIP1 Beta-catenin-interacting protein 1 yes yes 0 1 0 By MS/MS 2 0 1 1 33.229 28.586 2 0.021551 37400 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 61.582 46.908 7933700 0 7933700 0 0 0 0 0 0 0 0 0 0 0 0 0 48254 4623 43271 404712 319322;319323 319322 2 SPEEPSTPGTVVSSPSISTPPIVPDIQK Unmodified 2845.4597 0.4596847 602 O94913 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 85.111 84.581 3 5.1885E-36 98114 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 86.08 83.606 144490000 0 27374000 0 0 10708000 11025000 9015200 9998300 8976700 12801000 11928000 10438000 8691000 9071700 14463000 48255 602 43272 404713;404714;404715;404716;404717;404718;404719;404720;404721;404722;404723;404724;404725 319324;319325;319326;319327;319328;319329;319330;319331;319332;319333;319334;319335;319336;319337;319338;319339;319340 319324 17 SPEERLFPEPLLPK Unmodified 1650.8981 0.8981077 3065 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 yes yes 0 0 1 By MS/MS 2 0 1 1 88.452 80.322 3 0.017165 104492 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.88 33.841 5003400 5003400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48256 3065 43273 404726 319341 319341 1 SPEETATQVPSLESLTLK Unmodified 1928.9943 0.99425251 4517 Q9HCK8 CHD8 Chromodomain-helicase-DNA-binding protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.72 2.86 2 1 15 3 1 1 1 1 1 1 1 1 2 2 2 1 83.663 83.01 2;3 7.6584E-107 102718 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 264.29 248.9 212750000 0 111970000 0 2483700 4942800 7134000 5301700 6303000 5741200 7751100 6495200 16418000 10629000 14250000 13327000 48257 4517 43274 404727;404728;404729;404730;404731;404732;404733;404734;404735;404736;404737;404738;404739;404740;404741;404742;404743;404744 319342;319343;319344;319345;319346;319347;319348;319349;319350;319351;319352;319353;319354;319355;319356 319345 14 SPEILVK Unmodified 784.46945 0.46945494 3955 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.534 38.713 2 0.031683 41473 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 124.37 52.424 622170000 0 0 0 31955000 33695000 33859000 50048000 46676000 30737000 60810000 63714000 72980000 63264000 56316000 78113000 48258 3955 43275 404745;404746;404747;404748;404749;404750;404751;404752;404753;404754;404755;404756 319357;319358;319359;319360;319361 319360 4 SPELFLCYK Unmodified 1155.5634 0.56343168 2830 Q5VZ89 DENND4C DENN domain-containing protein 4C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 75.53 75.668 2 0.014237 87599 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 58.596 48.609 15009000 0 0 0 0 0 0 0 3835600 0 0 0 0 5866500 5307400 0 48259 2830 43276 404757;404758;404759 319362 319362 1 SPELLAR Unmodified 784.4443 0.44430282 2328 Q13616 CUL1 Cullin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 34.069 34.226 2 0.023373 37837 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 88.643 34.118 120840000 0 0 0 9439000 4834200 13256000 8293900 4856900 6174800 15240000 0 15740000 10703000 10995000 21309000 48260 2328 43277 404760;404761;404762;404763;404764;404765;404766;404767;404768;404769;404770 319363;319364;319365;319366;319367 319364 5 SPELQEEFGYNAETQK Unmodified 1868.8428 0.84283724 1711 P53365 ARFIP2 Arfaptin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 63.09 62.413 2 4.4643E-131 70803 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 253.88 247.49 292150000 0 157800000 0 3961900 4442200 9289500 8273400 8907000 7017200 15306000 14917000 18870000 12898000 10518000 19949000 48261 1711 43278 404771;404772;404773;404774;404775;404776;404777;404778;404779;404780;404781;404782;404783;404784 319368;319369;319370;319371;319372;319373;319374;319375;319376;319377;319378;319379;319380;319381 319372 14 SPELVQAMFPK Oxidation (M) 1261.6377 0.63765925 4831 Q9UBB4 ATXN10 Ataxin-10 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 66.204 64.869 2 2.5401E-12 79107 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 155.07 134.74 789410000 28652000 423350000 44861000 16199000 12543000 33574000 23426000 15954000 19189000 38043000 24246000 35901000 25745000 21359000 26370000 48262 4831 43279 404785;404786;404787;404788;404789;404790;404791;404792;404793;404794;404795;404796;404797;404798;404799;404800 319382;319383;319384;319385;319386;319387;319388;319389;319390;319391;319392;319393;319394;319395;319396;319397;319398;319399;319400;319401;319402;319403;319404;319405 319393 6203 24 SPELVQAMFPK Unmodified 1245.6427 0.64274463 4831 Q9UBB4 ATXN10 Ataxin-10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 80.762 79.644 2 7.1191E-10 97289 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 171.56 155.23 932440000 47792000 606370000 28896000 9077000 10156000 28709000 13019000 16633000 10724000 25420000 26530000 25752000 16207000 23066000 44091000 48263 4831 43279 404801;404802;404803;404804;404805;404806;404807;404808;404809;404810;404811;404812;404813;404814;404815;404816 319406;319407;319408;319409;319410;319411;319412;319413;319414;319415;319416;319417;319418;319419;319420;319421;319422 319417 17 SPENTEGK Unmodified 860.38758 0.3875758 2560 Q15651 HMGN3 High mobility group nucleosome-binding domain-containing protein 3 yes yes 0 0 0 By MS/MS 1 0 1 1 106.83 112.09 2 0.034651 92882 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 104.37 86.804 62012000 62012000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48264 2560 43280 404817 319423 319423 0 SPEPEATLTFPFLDK Unmodified 1690.8454 0.84540342 5054 Q9UPQ0 LIMCH1 LIM and calponin homology domains-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.08 3.33 2 1 9 2 1 1 1 1 1 1 1 1 1 1 92.574 91.77 2 2.2105E-05 106455 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 105.65 58.09 61066000 0 23716000 1440300 0 2282200 2851100 2711100 3339700 3518400 5557200 0 4920600 2413500 0 8315500 48265 5054 43281 404818;404819;404820;404821;404822;404823;404824;404825;404826;404827;404828;404829 319424;319425;319426;319427;319428;319429;319430;319431;319432 319425 8 SPEPEVLSTQEDLFDQSNK Unmodified 2162.0015 0.0015227276 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 2 2 4 81.139 77.121 2;3 2.1275E-05 92606 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 96.734 96.734 165380000 0 165380000 0 0 0 0 0 0 0 0 0 0 0 0 0 48266 2203 43282 404830;404831;404832;404833 319433;319434;319435;319436 319436 4 SPEPLGLPQSQSAQALTPPPIPNGSAPEGPASPGSQ Unmodified 3460.711 0.71104179 5051 Q9UPN7 PPP6R1 Serine/threonine-protein phosphatase 6 regulatory subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 87.177 87.278 3 1.1706E-15 101117 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.686 41.52 38578000 0 0 0 0 2750900 2881400 0 2681300 2352100 5563300 4109800 6339200 3102800 2934800 5862200 48267 5051 43283 404834;404835;404836;404837;404838;404839;404840;404841;404842;404843 319437;319438;319439;319440;319441;319442;319443;319444;319445;319446;319447 319439 11 SPEQNVPVILLK Unmodified 1335.7762 0.77620165 2487 Q15051 IQCB1 IQ calmodulin-binding motif-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 84.279 79.535 2 0.00077733 98882 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.009 70.623 26960000 0 26960000 0 0 0 0 0 0 0 0 0 0 0 0 0 48268 2487 43284 404844 319448 319448 1 SPEQQLSATQK Unmodified 1215.6095 0.60953025 1683 P52294 KPNA1 Importin subunit alpha-5;Importin subunit alpha-5, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21.55 21.084 2 3.6571E-127 20949 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 222.28 198.93 947690000 20508000 97328000 0 36199000 42393000 67617000 62516000 47129000 42084000 76919000 91495000 106440000 76010000 78358000 102690000 48269 1683 43285 404845;404846;404847;404848;404849;404850;404851;404852;404853;404854;404855;404856;404857;404858 319449;319450;319451;319452;319453;319454;319455;319456;319457;319458;319459;319460;319461;319462;319463 319453 15 SPESSESQTSQSESR Unmodified 1624.6813 0.68125122 2970 Q6T4R5 NHS Nance-Horan syndrome protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.8107 6.9313 2 2.3966E-27 5186 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 151.1 144.71 41920000 0 0 0 2558900 2304400 2332800 2959700 0 3794000 5656000 6018900 3421400 2713000 4029500 6131200 48270 2970 43286 404859;404860;404861;404862;404863;404864;404865;404866;404867;404868;404869;404870 319464;319465;319466;319467;319468;319469;319470;319471;319472;319473;319474;319475 319473 12 SPESVPVDSNK Unmodified 1157.5564 0.55643205 3958 Q96QE3 ATAD5 ATPase family AAA domain-containing protein 5 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 21.274 21.514 2 0.0064394 21168 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 63.426 49.424 25813000 0 0 0 0 1928200 0 2638100 0 0 4570300 5860700 4935300 3345500 2534900 0 48271 3958 43287 404871;404872;404873;404874;404875;404876;404877 319476;319477;319478;319479;319480 319479 5 SPETGTAGGSSTASYSAGR Unmodified 1742.7707 0.77073493 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.547 22.752 2 2.1647E-109 22641 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 239.61 228.08 103650000 0 0 0 5225300 5236500 4862800 5554100 5229400 6504600 9461600 12900000 12538000 9932800 11903000 14303000 48272 3443 43288 404878;404879;404880;404881;404882;404883;404884;404885;404886;404887;404888;404889 319481;319482;319483;319484;319485;319486;319487;319488;319489;319490;319491 319488 11 SPETGTAGGSSTASYSAGRGLEGNANSPAHLRGPEQTSGQTAK Unmodified 4143.9442 0.94418264 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 2 By MS/MS 2 0 2 2 54.481 46.372 4;5 4.4237E-100 63626 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 111.75 110.35 59374000 59374000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48273 3443 43289 404890;404891 319492;319493;319494 319492 3 SPEVLLGSAR Unmodified 1027.5662 0.56620887 822 P06493 CDK1 Cyclin-dependent kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.651 49.807 2 0.0054527 56430 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 68.893 40.719 1061600000 0 0 0 56608000 63692000 88870000 80742000 81357000 46581000 102210000 89714000 121300000 89120000 76926000 164480000 48274 822 43290 404892;404893;404894;404895;404896;404897;404898;404899;404900;404901;404902;404903 319495;319496;319497;319498 319495 4 SPEVLSGGEDGAVR Unmodified 1371.663 0.66302238 3177 Q86W42 THOC6 THO complex subunit 6 homolog yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.855 41.033 2 5.867E-20 45596 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 141.1 118.41 156440000 0 0 0 10679000 9896100 9269600 11676000 12644000 7097400 14209000 16067000 16897000 15231000 14169000 18609000 48275 3177 43291 404904;404905;404906;404907;404908;404909;404910;404911;404912;404913;404914;404915 319499;319500;319501;319502;319503;319504;319505;319506;319507;319508;319509 319500 10 SPEVVQFLQK Unmodified 1173.6394 0.63937381 139 O00287 RFXAP Regulatory factor X-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.135 73.201 2 0.00055401 83949 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 156.01 129.83 316010000 0 0 0 17104000 21082000 25239000 21876000 27334000 25411000 28115000 28424000 36268000 25694000 26364000 33099000 48276 139 43292 404916;404917;404918;404919;404920;404921;404922;404923;404924;404925;404926;404927 319510;319511;319512;319513;319514;319515;319516;319517;319518;319519;319520;319521;319522;319523 319516 14 SPEYLSLFIDDK Unmodified 1425.7028 0.70276193 2330 Q13618 CUL3 Cullin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 88.268 88.397 2 0.0022534 102593 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 63.624 47.167 11945000 0 0 0 0 0 1387400 1120200 0 0 2662400 2963200 2053200 0 1758900 0 48277 2330 43293 404928;404929;404930;404931;404932;404933 319524;319525;319526;319527 319525 4 SPEYPEGR Unmodified 933.41921 0.41921028 2231 Q13085 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 8 1 1 1 1 1 1 1 1 15.744 15.907 2 0.011111 15732 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 77.674 44.316 31738000 0 0 0 0 1469700 3311400 3534700 1898400 0 3277500 4889100 6866100 0 6491600 0 48278 2231 43294 404934;404935;404936;404937;404938;404939;404940;404941 319528;319529;319530;319531;319532 319532 5 SPFAAAVGQEK Unmodified 1103.5611 0.56112349 3381 Q8N9T8 KRI1 Protein KRI1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 41.881 41.988 2 0.001179 46211 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 74.533 51.793 59363000 0 0 0 6113200 5330200 5336700 3366400 4624500 0 7926500 8934000 9692700 8039000 0 0 48279 3381 43295 404942;404943;404944;404945;404946;404947;404948;404949;404950;404951 319533;319534;319535;319536;319537;319538;319539;319540;319541;319542 319540 10 SPFAEGTSAR Unmodified 1021.4829 0.48287317 189 O14578 CIT Citron Rho-interacting kinase yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 23.636 23.925 2 0.024295 25339 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 45.022 21.951 23033000 0 0 0 0 2101700 0 0 1881800 1459700 2988200 3100500 3897600 3686100 0 3917400 48280 189 43296 404952;404953;404954;404955;404956;404957;404958;404959 319543 319543 1 SPFEHSVEHK Unmodified 1195.5622 0.56218613 199 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.389 14.551 3 0.0053665 14224 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 60.754 45.61 118860000 0 0 0 5380500 5959700 8143100 5002800 7681300 5193700 13085000 11300000 19276000 14615000 8880600 14343000 48281 199 43297 404960;404961;404962;404963;404964;404965;404966;404967;404968;404969;404970;404971 319544;319545;319546;319547;319548;319549;319550 319549 5 SPFEQHIK Unmodified 984.50288 0.50288033 3611 Q92520 FAM3C Protein FAM3C yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 29.794 25.381 2 0.0032585 35444 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 127.46 91.968 104730000 69812000 0 34918000 0 0 0 0 0 0 0 0 0 0 0 0 48282 3611 43298 404972;404973 319551 319551 1 SPFEVQVGPEAGMQK Oxidation (M) 1618.7661 0.76610724 487 O75369 FLNB Filamin-B yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.29 3.67 4 2 11 1 4 1 1 1 1 1 1 1 1 1 1 1 1 64.356 62.458 2 1.2893E-49 70844 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 168.3 155.67 364810000 6881800 262970000 4473500 5954500 3653100 7456600 4377400 0 4239300 10860000 10109000 10424000 6560400 6975600 19880000 48283 487 43299 404974;404975;404976;404977;404978;404979;404980;404981;404982;404983;404984;404985;404986;404987;404988;404989;404990 319552;319553;319554;319555;319556;319557;319558;319559;319560;319561;319562;319563;319564;319565;319566;319567;319568;319569;319570;319571;319572 319567 624 20 SPFEVQVGPEAGMQK Unmodified 1602.7712 0.77119262 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.29 3.67 4 2 11 1 4 1 1 1 1 1 1 1 1 1 1 1 1 71.578 69.932 2;3 1.5596E-83 80503 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 186.81 167.21 1106000000 10106000 1016000000 0 3713100 0 7573400 4631900 3528600 0 7363300 10094000 9821700 4056600 7378900 21678000 48284 487 43299 404991;404992;404993;404994;404995;404996;404997;404998;404999;405000;405001;405002;405003;405004;405005;405006;405007 319573;319574;319575;319576;319577;319578;319579;319580;319581;319582;319583;319584;319585;319586;319587;319588 319587 15 SPFEVSVDK Unmodified 1006.4971 0.49712625 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 51.066 49.758 2 0.005264 56402 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 78.516 49.367 1561100000 27157000 1336600000 11929000 5859700 7196100 4627200 12215000 9662600 7670100 17292000 26551000 21702000 13995000 17950000 40656000 48285 487 43300 405008;405009;405010;405011;405012;405013;405014;405015;405016;405017;405018;405019;405020;405021;405022;405023 319589;319590;319591;319592;319593;319594;319595;319596;319597;319598;319599;319600;319601;319602;319603 319589 15 SPFEVYVDK Unmodified 1082.5284 0.52842638 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.39 3.7 5 1 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 63.617 61.867 2 0.00037138 75498 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 126.24 109.7 2897500000 92835000 2000600000 61931000 35182000 48433000 44445000 50791000 30422000 31014000 65823000 92581000 96593000 49944000 56716000 140110000 48286 1124 43301 405024;405025;405026;405027;405028;405029;405030;405031;405032;405033;405034;405035;405036;405037;405038;405039;405040;405041 319604;319605;319606;319607;319608;319609;319610;319611;319612;319613;319614;319615;319616;319617;319618;319619;319620;319621;319622;319623;319624;319625;319626 319612 23 SPFLSSAEGAVPK Unmodified 1288.6663 0.66631685 2972 Q6UB99 ANKRD11 Ankyrin repeat domain-containing protein 11 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 64.115 64.295 2 0.033497 72762 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 33.89 24.11 7933600 0 0 0 0 0 0 0 0 0 0 0 0 4313300 3620300 0 48287 2972 43302 405042;405043 319627;319628 319627 2 SPFNDRFPLK Unmodified 1219.635 0.63495714 602 O94913 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 61.685 61.782 3 0.013202 70931 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 47.706 32.076 80482000 0 0 0 4738700 2690800 7364200 0 7161100 5851800 7610900 6557200 10331000 7433800 6732200 14010000 48288 602 43303 405044;405045;405046;405047;405048;405049;405050;405051;405052;405053;405054 319629;319630;319631 319631 3 SPFNSPSPQDSPR Unmodified 1414.6477 0.64770667 869 P08651 NFIC Nuclear factor 1 C-type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 20 1 2 2 2 1 2 2 2 2 1 2 1 38.361 38.54 2;3 7.8638E-91 43165 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 204.17 198.25 2159400000 0 0 0 99849000 120620000 127760000 156940000 99010000 146270000 195390000 272190000 217000000 198610000 225790000 299960000 48289 869 43304 405055;405056;405057;405058;405059;405060;405061;405062;405063;405064;405065;405066;405067;405068;405069;405070;405071;405072;405073;405074 319632;319633;319634;319635;319636;319637;319638;319639;319640;319641;319642;319643;319644 319644 13 SPFPMYSETVDLIK Unmodified 1625.8011 0.80109577 4894 Q9UHB7 AFF4 AF4/FMR2 family member 4 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 56.761 55.963 2 0.0032669 63675 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 48.64 2.6673 355750000 0 140830000 146290000 2613700 1788200 5114700 5016000 5033100 2431400 7562800 5521100 6382400 6675000 6583400 13918000 48290 4894 43305 405075;405076;405077;405078;405079;405080;405081;405082;405083;405084;405085;405086;405087;405088;405089 319645;319646;319647;319648;319649;319650 319646 6 SPFPMYSETVDLIK Oxidation (M) 1641.796 0.79601039 4894 Q9UHB7 AFF4 AF4/FMR2 family member 4 yes yes 0 1 0 By MS/MS 2 0 1 1 87.598 82.789 2 0.027129 102920 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 49.777 14.889 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48291 4894 43305 405090 319651 319651 1 SPFSVAVSPSLDLSK Unmodified 1532.8086 0.80862399 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.48 3.65 8 2 21 2 5 3 1 1 2 2 1 2 2 2 2 2 2 2 83.631 82.604 2;3 8.8607E-81 99896 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 249.2 231.14 5102300000 682490000 3227000000 106110000 16735000 37053000 67957000 45733000 42350000 40959000 100240000 104100000 116600000 69244000 132300000 313420000 48292 1124 43306 405091;405092;405093;405094;405095;405096;405097;405098;405099;405100;405101;405102;405103;405104;405105;405106;405107;405108;405109;405110;405111;405112;405113;405114;405115;405116;405117;405118;405119;405120;405121 319652;319653;319654;319655;319656;319657;319658;319659;319660;319661;319662;319663;319664;319665;319666;319667;319668;319669;319670;319671;319672;319673;319674;319675;319676;319677 319671 21 SPFSVHPK Unmodified 897.47085 0.47085192 1582 P49642 PRIM1 DNA primase small subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.17 3.18 1 2 9 1 2 1 1 1 1 1 1 1 1 1 26.634 25.577 2 0.017493 35016 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.308 44.427 141380000 1058100 39136000 0 7454100 7306400 0 12106000 8938100 7148400 15706000 0 16265000 16318000 9946000 0 48293 1582 43307 405122;405123;405124;405125;405126;405127;405128;405129;405130;405131;405132;405133 319678;319679;319680;319681;319682 319680 5 SPFTVGVAAPLDLSK Unmodified 1500.8188 0.81879474 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.39 3.7 5 1 12 1 3 2 1 1 1 1 1 1 1 1 1 1 1 1 86.094 84.695 2;3 2.4606E-60 98025 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 177.83 157.55 1909000000 96673000 1519500000 24471000 9200700 12097000 22530000 14482000 13275000 11942000 20869000 28755000 32542000 12463000 23379000 66869000 48294 487 43308 405134;405135;405136;405137;405138;405139;405140;405141;405142;405143;405144;405145;405146;405147;405148;405149;405150;405151 319683;319684;319685;319686;319687;319688;319689;319690;319691;319692;319693;319694;319695;319696;319697;319698;319699;319700;319701;319702 319689 19 SPFYLDSLEEK Unmodified 1326.6343 0.63434802 3006 Q6ZRS2 SRCAP Helicase SRCAP yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 77.005 77.033 2 0.012757 89092 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 47.228 30.895 21042000 0 0 0 2134700 2172600 0 2156700 0 2913000 2472000 2627400 0 2480800 0 4085000 48295 3006 43309 405152;405153;405154;405155;405156;405157;405158;405159 319703;319704;319705 319705 3 SPGADLLQVLTK Unmodified 1240.7027 0.70270235 2672 Q3LXA3 DAK Bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase (cyclizing);ATP-dependent dihydroxyacetone kinase;FAD-AMP lyase (cyclizing) yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 88.505 87.327 2 3.5829E-18 110544 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 186.74 151.23 751220000 309060000 339340000 48427000 1619800 0 5286300 2098300 2773900 1836600 4481900 5258100 4588400 2448500 4612500 19385000 48296 2672 43310 405160;405161;405162;405163;405164;405165;405166;405167;405168;405169;405170;405171;405172;405173;405174;405175 319706;319707;319708;319709;319710;319711;319712;319713;319714;319715;319716;319717;319718;319719;319720;319721;319722;319723;319724 319714 19 SPGAPGPLTLK Unmodified 1036.5917 0.59169534 2595 Q15942 ZYX Zyxin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53.676 52.693 2 0.0006234 58222 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.16 56.447 604760000 8598000 23888000 0 22268000 17592000 25321000 31649000 23487000 22282000 61681000 0 92925000 36300000 78529000 160240000 48297 2595 43311 405176;405177;405178;405179;405180;405181;405182;405183;405184;405185;405186;405187;405188;405189 319725;319726;319727;319728;319729;319730;319731;319732;319733;319734;319735;319736;319737 319729 13 SPGASNFSTLPK Unmodified 1204.6088 0.60880197 5198 Q9Y4E8 USP15 Ubiquitin carboxyl-terminal hydrolase 15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 53.636 47.606 2 0.0040756 64782 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.452 68.303 25808000 23555000 0 2253600 0 0 0 0 0 0 0 0 0 0 0 0 48298 5198 43312 405190;405191;405192 319738;319739 319739 2 SPGASNLK Unmodified 772.40792 0.40791731 2042 Q00653 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 10.359 6.7946 2 0.033053 9398 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.5 62.463 181170000 15601000 165570000 0 0 0 0 0 0 0 0 0 0 0 0 0 48299 2042 43313 405193;405194 319740 319740 0 SPGASVSSSLTSLCSSSSDPAPSDR Unmodified 2438.0867 0.086725695 4802 Q9P206 KIAA1522 Uncharacterized protein KIAA1522 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 66.682 66.777 3 1.4586E-07 76658 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 45.735 41.784 32708000 0 0 0 0 4103100 0 4827400 6148200 0 6398500 0 6441400 0 4789000 0 48300 4802 43314 405195;405196;405197;405198;405199;405200;405201 319741;319742;319743;319744;319745;319746;319747;319748;319749 319742 9 SPGDFTSAAQLASTPFHK Unmodified 1860.9006 0.90062689 354 O43683 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77.112 76.397 3 3.9367E-28 96321 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 105.19 86.953 153360000 38150000 0 6118400 3259300 3547400 7574100 6646900 8844500 9068700 10268000 7569600 10819000 6485800 9599900 25410000 48301 354 43315 405202;405203;405204;405205;405206;405207;405208;405209;405210;405211;405212;405213;405214;405215 319750;319751;319752;319753;319754;319755;319756;319757;319758;319759;319760;319761;319762;319763;319764 319755 15 SPGDLTAEEK Unmodified 1045.4928 0.49276916 580 O94761 RECQL4 ATP-dependent DNA helicase Q4 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 21.376 21.357 2 0.010867 22245 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 55.249 27.62 20032000 0 0 0 0 0 20032000 0 0 0 0 0 0 0 0 0 48302 580 43316 405216;405217 319765;319766 319765 2 SPGETSKPRPFAGGGYR Unmodified 1762.8751 0.87508084 5046 Q9UNZ2 NSFL1C NSFL1 cofactor p47 yes yes 0 0 2 By matching By MS/MS 10 0 2 1 1 27.654 28.347 4 0.01858 29549 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 24.041 7.7349 12852000 0 0 0 0 0 0 0 0 0 0 0 4584300 0 0 8267400 48303 5046 43317 405218;405219 319767 319767 1 SPGFASPK Unmodified 789.4021 0.40210366 1600 P49790 NUP153 Nuclear pore complex protein Nup153 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 21.704 21.582 2 0.0067028 21926 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 98.629 71.001 508350000 0 18299000 0 28463000 22609000 31243000 39688000 42171000 23332000 41884000 53540000 54071000 49577000 48331000 55141000 48304 1600 43318 405220;405221;405222;405223;405224;405225;405226;405227;405228;405229;405230;405231;405232 319768;319769;319770;319771;319772;319773;319774;319775;319776 319773 7 SPGHMVILDQTK Oxidation (M) 1340.6758 0.67583567 4697 Q9NWH9 SLTM SAFB-like transcription modulator yes yes 0 1 0 By MS/MS 2 0 1 1 35.579 29.231 2 0.0059142 41007 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.416 36.394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48305 4697 43319 405233 319777 319777 6100 1 SPGIVSTNLPSYQK Unmodified 1489.7777 0.77765821 3183 Q86WG5 SBF2 Myotubularin-related protein 13 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 62.02 62.198 2 0.0012706 70995 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 82.494 66.879 28388000 0 0 0 0 3314200 4232700 0 0 0 3626600 3462900 7331800 0 2893800 3526300 48306 3183 43320 405234;405235;405236;405237;405238;405239;405240;405241 319778;319779;319780;319781;319782 319780 5 SPGLYAIEEGEQEK Unmodified 1548.7308 0.7307676 4439 Q9H7Z3 NRDE2 Protein NRDE2 homolog yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 63.813 58.472 2 0.0060967 74924 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 59.739 37.209 23533000 0 23533000 0 0 0 0 0 0 0 0 0 0 0 0 0 48307 4439 43321 405242;405243 319783;319784 319783 2 SPGLYFLTAGDQGTLR Unmodified 1694.8628 0.86278482 2188 Q12788 TBL3 Transducin beta-like protein 3 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 85.006 85.164 2 0.00033052 98416 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.498 51.622 9405800 0 0 0 0 0 0 0 0 0 0 0 4105200 0 0 5300600 48308 2188 43322 405244;405245 319785;319786 319785 2 SPGMLEPLGSSR Oxidation (M) 1245.6023 0.60233638 5066 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 2 1 2 1 2 1 1 1 42.543 42.861 2 0.00063433 47977 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 72.006 52.735 61367000 0 0 0 0 0 0 14420000 6134200 5021600 5846300 9181400 10982000 0 0 9782200 48309 5066 43323 405246;405247;405248;405249;405250;405251;405252;405253;405254;405255;405256;405257 319787;319788;319789;319790;319791;319792;319793;319794;319795 319792 6427 8 SPGMLEPLGSSR Unmodified 1229.6074 0.60742176 5066 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 2 1 57.242 57.463 2 0.0057958 65559 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 53.124 29.695 53466000 0 0 0 0 6605300 0 6361900 0 0 6053700 8077800 7503400 10269000 0 8595100 48310 5066 43323 405258;405259;405260;405261;405262;405263;405264;405265 319796;319797;319798;319799;319800 319800 5 SPGNTSQPPAFFSK Unmodified 1463.7045 0.70449327 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 58.487 57.959 2 2.0421E-85 65618 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 194.06 173.85 227620000 28259000 0 0 8544500 10391000 13190000 15898000 11013000 14138000 18257000 19347000 26316000 22946000 14980000 24343000 48311 5262 43324 405266;405267;405268;405269;405270;405271;405272;405273;405274;405275;405276;405277;405278 319801;319802;319803;319804;319805;319806;319807;319808;319809;319810;319811;319812;319813;319814;319815;319816;319817 319813 17 SPGPIVSR Unmodified 811.4552 0.45520186 3182 Q86WB0 ZC3HC1 Nuclear-interacting partner of ALK yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 22.024 22.317 2 0.025766 23095 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 58.426 24.91 131690000 0 0 0 0 0 12782000 8827400 5434800 8190600 17100000 15137000 19223000 14327000 12002000 18669000 48312 3182 43325 405279;405280;405281;405282;405283;405284;405285;405286;405287;405288 319818 319818 1 SPGPPALK Unmodified 765.43849 0.43848916 3213 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.871 28.069 2 0.0083611 29900 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 86.472 50.979 594300000 0 0 0 36501000 38920000 44470000 47537000 43424000 37749000 54830000 64859000 63898000 51137000 45265000 65712000 48313 3213 43326 405289;405290;405291;405292;405293;405294;405295;405296;405297;405298;405299;405300 319819;319820;319821;319822;319823;319824;319825;319826;319827;319828;319829;319830 319827 11 SPGSAGRSQTPPGVATPPIPK Unmodified 2001.0643 0.064338176 2558 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 0 0 1 By MS/MS 2 0 1 1 63.45 55.182 3 0.015656 74421 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 27.904 19.41 6792900 6792900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48314 2558 43327 405301 319831 319831 1 SPGSGSQSSGWHEVEPGMPSPTTLK Oxidation (M) 2555.1598 0.15983106 2199 Q12857 NFIA Nuclear factor 1 A-type yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 56.213 56.333 3 1.549E-28 64397 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 90.884 86.629 156750000 0 0 0 8675100 11069000 9465900 16818000 0 13907000 23543000 16228000 12943000 14967000 12121000 17009000 48315 2199 43328 405302;405303;405304;405305;405306;405307;405308;405309;405310;405311;405312 319832;319833;319834;319835;319836;319837;319838;319839;319840;319841;319842;319843;319844 319844 3566 13 SPGSGSQSSGWHEVEPGMPSPTTLK Unmodified 2539.1649 0.16491644 2199 Q12857 NFIA Nuclear factor 1 A-type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 69.05 69.157 3 3.1884E-42 79148 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 104.41 99.743 218410000 0 0 0 13022000 0 0 0 19723000 0 26099000 27037000 0 21294000 30761000 80476000 48316 2199 43328 405313;405314;405315;405316;405317;405318;405319 319845;319846;319847;319848;319849;319850;319851;319852;319853 319850 9 SPGSISYLPSFFTK Unmodified 1529.7766 0.77659558 488 O75376 NCOR1 Nuclear receptor corepressor 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 89.099 89.244 2 1.7777E-05 103367 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 105.46 80.669 31242000 0 0 0 0 0 2384500 1160800 2645900 1942100 4851000 2760000 4466600 0 2023300 9008100 48317 488 43329 405320;405321;405322;405323;405324;405325;405326;405327;405328 319854;319855;319856;319857;319858;319859;319860;319861 319857 8 SPGSPPGPELPIETALDDRER Unmodified 2232.1022 0.10223983 3521 Q8TEW0 PARD3 Partitioning defective 3 homolog yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By matching 10 0 5 1 1 1 1 1 80.412 80.536 3 0.012457 93036 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 25.083 16.693 21334000 0 0 0 0 0 3329900 0 0 2348800 5230300 0 0 0 1667000 8757900 48318 3521 43330 405329;405330;405331;405332;405333 319862 319862 1 SPGSPVGEGTGSPPK Unmodified 1352.6572 0.65720872 1361 P35611 ADD1 Alpha-adducin yes yes 0 0 0 By MS/MS 10 0 1 1 25.758 26.086 2 0.011312 26751 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 51.436 38.448 2398400 0 0 0 0 0 0 0 0 0 0 0 0 0 2398400 0 48319 1361 43331 405334 319863 319863 0 SPGSTPTTPTSSQAPQK Unmodified 1670.8111 0.81114318 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 1 1 2 2 2 2 2 2 2 2 22.472 22.696 2;3 3.466E-42 23258 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 186.13 159.24 351490000 0 0 0 16642000 14467000 16020000 19114000 24575000 22050000 33950000 29312000 54968000 37036000 45273000 38083000 48320 1364 43332 405335;405336;405337;405338;405339;405340;405341;405342;405343;405344;405345;405346;405347;405348;405349;405350;405351;405352;405353;405354;405355;405356 319864;319865;319866;319867;319868;319869;319870;319871;319872;319873;319874;319875;319876;319877 319875 14 SPGSVVFR Unmodified 847.4552 0.45520186 539 O75787 ATP6AP2 Renin receptor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 38.652 38.695 2 0.0068592 42896 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 93.561 64.251 15642000 0 0 0 0 0 6602600 9039300 0 0 0 0 0 0 0 0 48321 539 43333 405357;405358;405359 319878;319879;319880 319879 3 SPGVAAAVAEDGGLK Unmodified 1340.6936 0.69359423 4145 Q9BTE7 DCUN1D5 DCN1-like protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 55.477 55.094 2 1.5274E-25 68378 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 167.71 140.92 82507000 0 14743000 0 0 3421900 8239200 5919500 5455300 3162300 9102300 8668000 0 6007300 6774300 11014000 48322 4145 43334 405360;405361;405362;405363;405364;405365;405366;405367;405368;405369;405370;405371 319881;319882;319883;319884;319885;319886;319887;319888;319889;319890;319891;319892;319893;319894 319887 14 SPGVAAAVAEDGGLKK Unmodified 1468.7886 0.78855725 4145 Q9BTE7 DCUN1D5 DCN1-like protein 5 yes yes 0 0 1 By MS/MS 2 0 1 1 49.906 45.991 2 1.2997E-08 57941 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 99.215 73.594 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48323 4145 43335 405372 319895 319895 1 SPHFFQPTNQQFK Unmodified 1604.7736 0.77357588 3839 Q96FV9 THOC1 THO complex subunit 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.178 56.304 3 0.035384 63022 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 22.328 12.67 74819000 0 0 0 3828200 2805600 5984900 3685400 5791300 3882700 5596500 7232100 6729200 7768600 7334900 14179000 48324 3839 43336 405373;405374;405375;405376;405377;405378;405379;405380;405381;405382;405383;405384 319896 319896 1 SPHFQVVNEETPK Unmodified 1510.7416 0.74160705 5171 Q9Y3P9 RABGAP1 Rab GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 6.64 3.88 5 1 8 2 2 2 1 1 1 1 1 1 1 1 46.283 44.023 2;3 3.4852E-10 55861 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 88.163 75.997 550530000 292680000 42384000 113200000 0 0 12585000 5795100 0 0 12693000 7897600 9925700 13778000 12765000 26823000 48325 5171 43337 405385;405386;405387;405388;405389;405390;405391;405392;405393;405394;405395;405396;405397;405398 319897;319898;319899;319900;319901;319902;319903;319904;319905;319906;319907;319908;319909;319910 319907 13 SPHISNCSVASDYLDLDK Unmodified 2019.9208 0.92076999 3746 Q96B01 RAD51AP1 RAD51-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 1 1 1 1 1 1 1 1 1 1 1 1 1 71.125 70.737 3 9.5947E-05 81196 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 54.511 50.409 146830000 0 7808800 16244000 0 4710000 7745400 7888900 14372000 9591500 9568800 11874000 15586000 11094000 8031500 22311000 48326 3746 43338 405399;405400;405401;405402;405403;405404;405405;405406;405407;405408;405409;405410;405411 319911;319912;319913;319914;319915;319916;319917;319918;319919;319920;319921;319922;319923;319924;319925 319920 14 SPHQLLSPSSFSPSATPSQK Unmodified 2082.0382 0.038183005 2385 Q14181 POLA2 DNA polymerase alpha subunit B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.932 64.023 3 5.0253E-08 73198 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 70.907 66.939 130490000 0 0 0 5975700 5304900 8241900 8416700 7410900 8011200 10778000 13701000 15965000 10204000 13918000 22559000 48327 2385 43339 405412;405413;405414;405415;405416;405417;405418;405419;405420;405421;405422;405423 319926;319927;319928;319929;319930;319931;319932;319933;319934;319935;319936;319937;319938 319926 13 SPHVTGSGASAGTHK Unmodified 1392.6746 0.67459012 1759 P55198 MLLT6 Protein AF-17 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 6.2863 5.8985 3 0.00043069 7664 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.591 40.008 22122000 12860000 0 0 729900 0 1334800 0 0 0 1051500 0 0 2108700 1573500 2464300 48328 1759 43340 405424;405425;405426;405427;405428;405429;405430 319939;319940 319939 2 SPICPALSGK Unmodified 1028.5325 0.5324659 4722 Q9NXA8 SIRT5 NAD-dependent protein deacylase sirtuin-5, mitochondrial yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 45.025 39.961 2 0.0092283 51653 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.815 39.826 70891000 0 70891000 0 0 0 0 0 0 0 0 0 0 0 0 0 48329 4722 43341 405431;405432 319941;319942 319941 2 SPIDTFPTDPIK Unmodified 1329.6816 0.68163256 1016 P15309 ACPP Prostatic acid phosphatase;PAPf39 yes yes 0 0 0 By MS/MS 10 0 1 1 75.399 74.878 2 0.0037911 86904 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 59.426 42.195 1777400 0 0 0 1777400 0 0 0 0 0 0 0 0 0 0 0 48330 1016 43342 405433 319943 319943 1 SPIEPSALEPAYYQGVYSRPVLNTS Unmodified 2737.3599 0.35991107 1767 P55317 FOXA1 Hepatocyte nuclear factor 3-alpha yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 85.867 85.997 3 5.6098E-23 99516 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.683 73.407 18009000 0 0 0 0 0 1916100 0 0 0 5142100 3450900 0 0 0 7500000 48331 1767 43343 405434;405435;405436;405437 319944;319945;319946;319947 319945 4 SPIIFIGTGEHIDDFEPFK Unmodified 2161.0732 0.073171528 1826 P61011 SRP54 Signal recognition particle 54 kDa protein yes yes 0 0 0 By MS/MS 2 0 1 1 96.995 88.864 3 4.2693E-06 114686 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.705 59.495 85065000 85065000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48332 1826 43344 405438 319948 319948 0 SPILVATAVAAR Unmodified 1167.6976 0.69755739 170 O00571;O15523 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.695 69.772 2 2.6618E-05 79849 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 105.2 68.638 676910000 0 0 0 32945000 41600000 63332000 55009000 39301000 36241000 76160000 71066000 76881000 45095000 52649000 86633000 48333 170 43345 405439;405440;405441;405442;405443;405444;405445;405446;405447;405448;405449;405450 319949;319950;319951;319952;319953;319954;319955;319956;319957;319958;319959;319960;319961;319962;319963;319964;319965;319966;319967;319968 319950 20 SPISFLSK Unmodified 877.49092 0.49091866 3065 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 65.79 65.871 2 0.031786 75356 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 54.712 33.01 45954000 0 0 0 2651300 3017900 4770300 3404400 2893200 2851600 4021700 5298000 7032800 0 4170200 5842900 48334 3065 43346 405451;405452;405453;405454;405455;405456;405457;405458;405459;405460;405461 319969;319970;319971;319972 319970 4 SPISPELHSAPLTPVAR Unmodified 1770.9628 0.96283322 3080 Q7Z3B3 KANSL1 KAT8 regulatory NSL complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.854 66.936 3 0.00012922 77301 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 67.646 57.161 60597000 0 0 0 2539300 3856700 5419600 4058200 5656500 5215200 6140900 4099400 6744200 4060800 4992600 7814100 48335 3080 43347 405462;405463;405464;405465;405466;405467;405468;405469;405470;405471;405472;405473 319973;319974;319975;319976;319977;319978;319979;319980;319981;319982 319981 10 SPISQLDCLNR Unmodified 1301.6398 0.63978452 2104 Q04726 TLE3 Transducin-like enhancer protein 3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 64.049 64.26 2 0.0033501 73387 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.282 50.723 28035000 0 0 0 0 0 3674500 0 0 2466200 5781500 4198300 7578800 0 4335500 0 48336 2104 43348 405474;405475;405476;405477;405478;405479;405480;405481 319983;319984;319985;319986;319987 319987 5 SPISSGSGGSHMSGTSSSSGMK Unmodified 2011.8575 0.8575178 2558 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23.084 22.304 3 1.0977E-11 31669 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.855 81.887 70005000 17515000 5855600 1578300 1978200 2310300 3892300 5293400 3798600 6289800 5543400 3628800 0 3841300 4082800 4397500 48337 2558 43349 405482;405483;405484;405485;405486;405487;405488;405489;405490;405491;405492;405493;405494;405495 319988;319989;319990;319991;319992;319993 319992 6 SPISSGSGGSHMSGTSSSSGMK 2 Oxidation (M) 2043.8473 0.84734705 2558 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 8.4784 7.7107 3 3.635E-13 11482 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 92.29 88.629 41026000 17556000 0 871030 1333500 0 0 3280500 0 0 0 9657900 4139100 0 0 4188900 48338 2558 43349 405496;405497;405498;405499;405500;405501;405502 319994;319995 319994 4213;4214 2 SPISSGSGGSHMSGTSSSSGMK Oxidation (M) 2027.8524 0.85243242 2558 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 0 1 0 By MS/MS 2 0 1 1 19.579 14.994 3 0.00073271 21602 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.953 37.67 8312600 8312600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48339 2558 43349 405503 319996 319996 4213;4214 1 SPISVPGGSALISNLGK Unmodified 1595.8883 0.88827129 1663 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 2 24 1 1 2 2 2 2 2 2 2 2 2 2 2 2 84.012 83.572 2;3 5.6907E-37 96787 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 133.71 114.9 1478300000 51541000 101200000 0 17201000 53518000 78213000 84186000 136700000 97202000 154110000 152930000 163860000 83390000 122420000 181850000 48340 1663 43350 405504;405505;405506;405507;405508;405509;405510;405511;405512;405513;405514;405515;405516;405517;405518;405519;405520;405521;405522;405523;405524;405525;405526;405527;405528;405529 319997;319998;319999;320000;320001;320002;320003;320004;320005;320006;320007;320008;320009;320010;320011;320012;320013 320006 16 SPITGNDLSPPVSFNLMFK Oxidation (M) 2079.0347 0.034677532 1440 P41250 GARS Glycine--tRNA ligase yes yes 0 1 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 94.341 88.662 2 2.092E-51 112679 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 134.61 123.97 23684000 20073000 3610800 0 0 0 0 0 0 0 0 0 0 0 0 0 48341 1440 43351 405530;405531;405532 320014;320015;320016 320016 2267 3 SPITGNDLSPPVSFNLMFK Unmodified 2063.0398 0.03976291 1440 P41250 GARS Glycine--tRNA ligase yes yes 0 0 0 By MS/MS 2 0 1 1 98.103 89.972 2 6.596E-77 116165 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 197.19 187.66 45832000 45832000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48342 1440 43351 405533 320017;320018 320018 2 SPITIITTK Unmodified 972.58555 0.58554733 1663 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 66.341 59.235 2 0.0058712 79104 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 106.68 89.907 28941000 14829000 14112000 0 0 0 0 0 0 0 0 0 0 0 0 0 48343 1663 43352 405534;405535 320019;320020 320020 2 SPLAGDFITMQCR Oxidation (M) 1510.6908 0.69083381 716 O96019 ACTL6A Actin-like protein 6A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 67.771 67.838 2 0.00013348 77883 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 83.397 72.567 144220000 0 0 0 9450000 6244400 12640000 11697000 0 10135000 15447000 21644000 25133000 0 12226000 19601000 48344 716 43353 405536;405537;405538;405539;405540;405541;405542;405543;405544;405545 320021;320022;320023;320024;320025;320026;320027;320028;320029;320030;320031;320032;320033;320034 320022 859 14 SPLAGDFITMQCR Unmodified 1494.6959 0.69591919 716 O96019 ACTL6A Actin-like protein 6A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.325 77.383 2 1.0983E-32 88829 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 195.83 185.04 213090000 0 0 0 6575100 6998500 19227000 8036200 9725200 10104000 14223000 25817000 20764000 13977000 21312000 56325000 48345 716 43353 405546;405547;405548;405549;405550;405551;405552;405553;405554;405555;405556;405557 320035;320036;320037;320038;320039;320040;320041;320042;320043;320044;320045;320046 320038 12 SPLEAPLVCSGLK Unmodified 1369.7275 0.72753689 3867 Q96HI0 SENP5 Sentrin-specific protease 5 yes yes 0 0 0 By MS/MS 2 0 1 1 79.725 75.013 2 7.2069E-10 93398 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.48 96.474 66517000 0 66517000 0 0 0 0 0 0 0 0 0 0 0 0 0 48346 3867 43354 405558 320047 320047 1 SPLELGEK Unmodified 871.4651 0.46509784 2570 Q15742 NAB2 NGFI-A-binding protein 2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 41.579 36.68 2 0.045828 47763 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.224 25.625 39055000 0 39055000 0 0 0 0 0 0 0 0 0 0 0 0 0 48347 2570 43355 405559;405560 320048 320048 1 SPLFQFAEISSSTSHSDASTK Unmodified 2226.0441 0.044056244 3598 Q8WY36 BBX HMG box transcription factor BBX yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 82.49 78.548 3 8.8998E-34 101621 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 117.64 99.774 59917000 54704000 0 0 0 0 0 0 0 0 0 0 0 0 0 5213200 48348 3598 43356 405561;405562 320049;320050 320050 0 SPLFSVQR Unmodified 932.50797 0.50796571 3538 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 52.733 52.935 2 0.00014213 58821 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 155 56.538 331670000 0 0 0 0 6608500 45013000 25151000 0 0 51451000 0 47436000 60966000 41816000 53234000 48349 3538 43357 405563;405564;405565;405566;405567;405568;405569;405570 320051;320052;320053;320054;320055 320053 5 SPLGEVAIR Unmodified 940.53418 0.53418046 458 O75131 CPNE3 Copine-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 54.19 54.262 2 0.038908 62780 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 44.753 14.035 56527000 0 0 0 7174600 3218900 7454400 5469400 5208700 2506400 6514400 6571500 6666400 0 5741700 0 48350 458 43358 405571;405572;405573;405574;405575;405576;405577;405578;405579;405580 320056 320056 1 SPLGGGGGSGASSQAACLK Unmodified 1660.7839 0.78388257 2858 Q68DK7 MSL1 Male-specific lethal 1 homolog yes yes 0 0 0 By MS/MS By MS/MS By matching By matching 8 3.46 1 3 1 1 1 1 39.585 38.105 2 1.018E-30 48391 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 142.1 118.72 25118000 0 19761000 0 1875500 1737500 0 0 0 1744000 0 0 0 0 0 0 48351 2858 43359 405581;405582;405583;405584 320057;320058;320059 320057 3 SPLIESTANMDNNQSQK Unmodified 1875.8633 0.86325511 232 O14974 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 45.6 45.317 2 1.0112E-75 57088 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 240.65 225.45 120400000 0 45763000 0 5371800 4447500 5824600 5042400 4021800 3766300 6309100 6391900 10780000 5944300 6132400 10602000 48352 232 43360 405585;405586;405587;405588;405589;405590;405591;405592;405593;405594;405595;405596;405597 320060;320061;320062;320063;320064;320065;320066;320067;320068;320069;320070;320071 320063 12 SPLIESTANMDNNQSQK Oxidation (M) 1891.8582 0.85816973 232 O14974 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 32.826 32.248 2 3.5217E-36 35464 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 126.1 126.1 48932000 0 13978000 0 0 2281200 3678700 3319800 0 2250500 3434700 4434300 4508500 3972100 3171100 3903000 48353 232 43360 405598;405599;405600;405601;405602;405603;405604;405605;405606;405607;405608;405609 320072;320073;320074;320075;320076;320077;320078;320079;320080;320081 320079 309 10 SPLIIFSDCDMNNAVK Oxidation (M) 1838.8543 0.85427033 1561 P49189 ALDH9A1 4-trimethylaminobutyraldehyde dehydrogenase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.44 3.62 2 1 6 2 1 1 1 1 1 1 1 80.905 79.776 2 7.3693E-57 95342 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 169.65 163.7 298060000 0 247350000 9429600 7239400 0 0 0 0 0 0 6744200 8536700 2181700 4340300 12238000 48354 1561 43361 405610;405611;405612;405613;405614;405615;405616;405617;405618 320082;320083;320084;320085;320086;320087;320088;320089;320090 320085 2477 9 SPLIIFSDCDMNNAVK Unmodified 1822.8594 0.8593557 1561 P49189 ALDH9A1 4-trimethylaminobutyraldehyde dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 3 1 87.977 83.292 2 1.7494E-31 100949 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 166.14 158.28 303980000 25694000 272120000 6167200 0 0 0 0 0 0 0 0 0 0 0 0 48355 1561 43361 405619;405620;405621;405622;405623 320091;320092;320093;320094;320095;320096 320094 6 SPLLTFPSK Unmodified 988.55933 0.55933258 1455 P42356 PI4KA Phosphatidylinositol 4-kinase alpha yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 69.659 69.767 2 0.024054 80689 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 50.805 35.306 31018000 0 0 0 0 1789500 2528600 2538000 2638600 2016300 4011500 4364800 4201300 3268200 3661600 0 48356 1455 43362 405624;405625;405626;405627;405628;405629;405630;405631;405632;405633 320097 320097 1 SPLMSEFQSQISSNPELAAIFESIQK Oxidation (M) 2896.4164 0.41643968 3170 Q86VP6 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 1 0 By MS/MS 3 0 1 1 99.442 96.034 3 2.3813E-05 115313 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 52.465 49.816 6690700 0 6690700 0 0 0 0 0 0 0 0 0 0 0 0 0 48357 3170 43363 405634 320098 320098 4791 1 SPLMSEFQSQISSNPELAAIFESIQK Unmodified 2880.4215 0.42152505 3170 Q86VP6 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 By MS/MS 3 0 1 1 100.73 97.247 3 1.2495E-08 116846 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 70.316 63.285 3477000 0 3477000 0 0 0 0 0 0 0 0 0 0 0 0 0 48358 3170 43363 405635 320099;320100 320100 2 SPLPGPSEEK Unmodified 1039.5186 0.51858998 2235 Q13112 CHAF1B Chromatin assembly factor 1 subunit B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 28.834 28.366 2 0.019341 30720 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 47.869 11.108 200750000 0 75732000 0 7943800 6003400 7679300 7371700 6857200 6462500 10689000 16122000 12665000 11869000 10881000 20476000 48359 2235 43364 405636;405637;405638;405639;405640;405641;405642;405643;405644;405645;405646;405647;405648;405649 320101;320102;320103;320104;320105;320106;320107 320102 7 SPLPIVR Unmodified 780.48577 0.48577371 2476 Q15021 NCAPD2 Condensin complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.366 51.514 2 0.02139 59040 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 106.76 57.449 217230000 0 0 0 9759600 10987000 24504000 16205000 17947000 10763000 22712000 21670000 20440000 16044000 17754000 28443000 48360 2476 43365 405650;405651;405652;405653;405654;405655;405656;405657;405658;405659;405660;405661 320108;320109;320110;320111;320112;320113;320114;320115;320116;320117 320117 10 SPLPLGFSPVCDPMDSK Oxidation (M) 1861.859 0.85902135 3826 Q96EY5 MVB12A Multivesicular body subunit 12A yes yes 0 1 0 By MS/MS 2 0 1 1 86.888 82.08 2 1.9125E-18 101955 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.06 106.99 36143000 0 36143000 0 0 0 0 0 0 0 0 0 0 0 0 0 48361 3826 43366 405662 320118 320118 5350 1 SPLPLGFSPVCDPMDSK Unmodified 1845.8641 0.86410673 3826 Q96EY5 MVB12A Multivesicular body subunit 12A yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 89.567 87.191 2 0.0019265 100988 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.76 49.341 95904000 0 92914000 0 0 0 0 0 0 0 0 0 0 0 0 2989800 48362 3826 43366 405663;405664 320119;320120 320120 2 SPLPPGNVK Unmodified 907.51272 0.51271674 4394 Q9H4A4 RNPEP Aminopeptidase B yes yes 0 0 0 By MS/MS By MS/MS 2.67 0.471 1 2 1 2 33.949 29.193 2 0.0073956 37170 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.541 63.476 427150000 851980 426300000 0 0 0 0 0 0 0 0 0 0 0 0 0 48363 4394 43367 405665;405666;405667 320121;320122;320123;320124;320125;320126;320127;320128 320123 8 SPLPSYPGANPQPAFGAAEGQPPGAAK Unmodified 2576.266 0.26595111 35 A8CG34;Q96HA1;A6NF01 POM121C;POM121;POM121B Nuclear envelope pore membrane protein POM 121C;Nuclear envelope pore membrane protein POM 121;Putative nuclear envelope pore membrane protein POM 121B yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.313 76.35 3 3.0469E-25 87937 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 75.896 66.567 148120000 0 0 0 7324600 10891000 11389000 15311000 13846000 11998000 15375000 13314000 19795000 15297000 13576000 0 48364 35 43368 405668;405669;405670;405671;405672;405673;405674;405675;405676;405677;405678 320129;320130;320131;320132;320133;320134;320135;320136;320137;320138;320139;320140;320141;320142 320132 14 SPLQSVVVR Unmodified 983.57638 0.57637963 5122 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 50.863 51.014 2 0.011907 56521 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 62.107 37.257 414600000 0 0 0 24571000 35128000 30843000 31899000 27262000 20577000 0 41457000 50355000 45871000 50528000 56108000 48365 5122 43369 405679;405680;405681;405682;405683;405684;405685;405686;405687;405688;405689 320143;320144;320145 320145 2 SPLQTIGEEQTQNPYTELLVLK Unmodified 2500.3061 0.30608459 4484 Q9HAD4 WDR41 WD repeat-containing protein 41 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 96.358 92.344 3 0.014466 114467 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 25.155 20.291 16347000 0 16347000 0 0 0 0 0 0 0 0 0 0 0 0 0 48366 4484 43370 405690;405691 320146 320146 1 SPLSALAR Unmodified 813.47085 0.47085192 4096 Q9BQG0 MYBBP1A Myb-binding protein 1A yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 48.63 48.889 2 0.028474 54048 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.721 10.769 48859000 0 0 0 0 3738300 0 5117700 0 0 0 0 11761000 12518000 7923000 7800500 48367 4096 43371 405692;405693;405694;405695;405696;405697 320147 320147 1 SPLSMLEMVK Unmodified 1133.5825 0.58245256 3005 Q6ZRQ5 MMS22L Protein MMS22-like yes yes 0 0 0 By MS/MS 2 0 1 1 92.54 84.41 2 0.024639 109391 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.691 43.706 3723400 3723400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48368 3005 43372 405698 320148 320148 1 SPLSQGDSSAPSLPK Unmodified 1469.7362 0.73618733 3662 Q92793 CREBBP CREB-binding protein yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 51.754 51.058 2 3.0664E-259 64685 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 268.93 249.1 360330000 0 130760000 0 16349000 15326000 14215000 15093000 13235000 0 20118000 23138000 32438000 15875000 21070000 42721000 48369 3662 43373 405699;405700;405701;405702;405703;405704;405705;405706;405707;405708;405709;405710;405711 320149;320150;320151;320152;320153;320154;320155;320156;320157;320158;320159;320160;320161;320162;320163;320164 320153 16 SPLSSPQQTQLLGELEK Unmodified 1853.9735 0.97345748 4981 Q9UKZ1 CNOT11 CCR4-NOT transcription complex subunit 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.12 3.26 2 2 12 4 1 1 1 1 1 1 1 1 1 1 1 1 81.345 80.391 2;3 6.7531E-70 99377 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 187.97 166.96 538380000 0 325020000 0 4389900 12662000 14915000 10470000 15127000 13482000 26311000 20571000 29890000 17477000 17452000 30615000 48370 4981 43374 405712;405713;405714;405715;405716;405717;405718;405719;405720;405721;405722;405723;405724;405725;405726;405727 320165;320166;320167;320168;320169 320165 4 SPLSWIEEK Unmodified 1087.555 0.55497548 1708 P53004 BLVRA Biliverdin reductase A yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 77.332 76.522 2 0.00088379 97942 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 144.12 114.97 346150000 227880000 0 61358000 0 1085200 4271600 2358400 4218000 2726700 4762200 5027400 0 2554800 4541500 25372000 48371 1708 43375 405728;405729;405730;405731;405732;405733;405734;405735;405736;405737;405738;405739 320170;320171;320172 320171 3 SPLTATPTFVTDSESTR Unmodified 1808.8792 0.87922275 976 P13056 NR2C1 Nuclear receptor subfamily 2 group C member 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 71.658 71.598 2 2.4092E-09 82540 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 90.653 36.97 9643900 0 0 0 0 3151000 0 3565700 0 0 0 0 0 2927100 0 0 48372 976 43376 405740;405741;405742;405743 320173;320174;320175 320173 3 SPLTLEDFK Unmodified 1048.5441 0.54407645 2603 Q16512 PKN1 Serine/threonine-protein kinase N1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 72.165 71.475 2 0.0016381 90057 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.48 117.7 264960000 0 126810000 2745400 9889100 7617200 12983000 10521000 8848600 7772900 10691000 18072000 16390000 9229300 8559400 14828000 48373 2603 43377 405744;405745;405746;405747;405748;405749;405750;405751;405752;405753;405754;405755;405756;405757;405758 320176;320177;320178;320179;320180;320181 320179 3 SPLTQEQLIPNLAMK Oxidation (M) 1697.9022 0.9022068 5029 Q9UNE7 STUB1 E3 ubiquitin-protein ligase CHIP yes yes 0 1 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.27 80.328 2 1.1959E-168 92525 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 218.15 193.69 130300000 0 0 0 3372600 4620300 7423700 5873900 4807200 5222000 10357000 17245000 20404000 6080100 11978000 32917000 48374 5029 43378 405759;405760;405761;405762;405763;405764;405765;405766;405767;405768;405769;405770 320182;320183;320184;320185;320186 320183 6370 4 SPLTQEQLIPNLAMK Unmodified 1681.9073 0.90729217 5029 Q9UNE7 STUB1 E3 ubiquitin-protein ligase CHIP yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 84.462 84.603 2 2.9267E-10 97782 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 147.24 132.37 27555000 0 0 0 0 0 0 0 0 0 0 0 5197500 0 3732300 18625000 48375 5029 43378 405771;405772;405773 320187 320187 0 SPLVMDVLNIQGVQR Oxidation (M) 1683.8978 0.89779012 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 1 0 By matching By MS/MS By MS/MS By matching By matching By matching By matching 10 0 7 1 1 1 1 1 1 1 82.607 82.691 3 0.00065747 95789 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 48.112 37.167 19967000 0 0 0 0 1233600 2338200 0 1965400 1050200 3162600 0 1746300 0 0 8470600 48376 2392 43379 405774;405775;405776;405777;405778;405779;405780 320188 320188 3919 1 SPLVMDVLNIQGVQR Unmodified 1667.9029 0.9028755 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 89.683 89.811 2 1.1545E-26 103978 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 149.96 136.05 5398700 0 0 0 0 0 0 0 0 0 1675600 0 0 0 0 3723100 48377 2392 43379 405781;405782 320189;320190 320190 2 SPMDLSTIK Oxidation (M) 1006.5005 0.50049707 2171 Q09472 EP300 Histone acetyltransferase p300 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 32.868 33.01 2 0.010911 36516 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 56.432 37.649 45921000 0 0 0 5921500 4253500 5373500 5152300 0 0 5805800 0 8128100 6519600 0 4767000 48378 2171 43380 405783;405784;405785;405786;405787;405788;405789;405790 320191;320192 320192 3497 2 SPMDLSTIK Unmodified 990.50558 0.50558245 2171 Q09472 EP300 Histone acetyltransferase p300 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 53.976 53.116 2 0.0052017 60221 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 80.455 43.296 190870000 0 62193000 0 16443000 0 0 0 21700000 0 0 0 0 26773000 32032000 31731000 48379 2171 43380 405791;405792;405793;405794;405795;405796;405797 320193;320194;320195;320196;320197;320198;320199;320200;320201 320200 9 SPMEFVEYNK Unmodified 1242.5591 0.55907458 2067 Q01970 PLCB3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 yes yes 0 0 0 By MS/MS 2 0 1 1 67.849 61.934 2 0.010444 78926 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.263 73.784 47928000 0 47928000 0 0 0 0 0 0 0 0 0 0 0 0 0 48380 2067 43381 405798 320202 320202 1 SPMEFVEYNK Oxidation (M) 1258.554 0.5539892 2067 Q01970 PLCB3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 yes yes 0 1 0 By MS/MS 2 0 1 1 48.503 42.856 2 0.015287 55854 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.572 63.519 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48381 2067 43381 405799 320203 320203 3360 1 SPMFPALGEASSDDDLFQSAK Unmodified 2211.9994 0.99941424 2840;5195 Q641Q2;Q5SRD0;Q9Y4E1 FAM21A;FAM21D;FAM21C WASH complex subunit FAM21A;Putative WASH complex subunit FAM21;WASH complex subunit FAM21C no no 0 0 0 By MS/MS 2 0 1 1 93.439 88.528 2 1.7115E-91 109921 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 160.47 129.99 22716000 0 22716000 0 0 0 0 0 0 0 0 0 0 0 0 0 48382 2840;5195 43382 405800 320204 320204 1 SPMFPALGEASSDDDLFQSAK Oxidation (M) 2227.9943 0.99432886 2840;5195 Q641Q2;Q5SRD0;Q9Y4E1 FAM21A;FAM21D;FAM21C WASH complex subunit FAM21A;Putative WASH complex subunit FAM21;WASH complex subunit FAM21C no no 0 1 0 By MS/MS 3 0 1 1 87.346 84.131 2 3.3219E-09 100746 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 86.214 73.078 4877600 0 4877600 0 0 0 0 0 0 0 0 0 0 0 0 0 48383 2840;5195 43382 405801 320205;320206 320205 4504 2 SPMLCGQYPVK Unmodified 1278.6101 0.6100643 604 O94916 NFAT5 Nuclear factor of activated T-cells 5 yes yes 0 0 0 By MS/MS 2 0 1 1 58.548 52.717 2 0.020949 67975 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.173 58.511 18323000 0 18323000 0 0 0 0 0 0 0 0 0 0 0 0 0 48384 604 43383 405802 320207 320207 1 SPMQEEEDLAAGVGR Oxidation (M) 1603.7148 0.71479996 3624 Q92560 BAP1 Ubiquitin carboxyl-terminal hydrolase BAP1 yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 52.931 52.403 2 0.00016845 59240 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 71.085 58.508 2553500 0 0 0 0 2553500 0 0 0 0 0 0 0 0 0 0 48385 3624 43384 405803;405804 320208;320209 320208 5122 2 SPMRDSLEPTYQQLQK Unmodified 1919.9411 0.9411115 3745 Q96AY4 TTC28 Tetratricopeptide repeat protein 28 yes yes 0 0 1 By MS/MS 2 0 1 1 63.778 55.499 3 0.0050373 74724 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 39.531 33.326 23286000 23286000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48386 3745 43385 405805 320210 320210 1 SPMSSLQISNEK Oxidation (M) 1335.634 0.63403044 4872 Q9UER7 DAXX Death domain-associated protein 6 yes yes 0 1 0 By MS/MS By matching By MS/MS By matching By MS/MS 8.4 3.2 1 4 1 1 1 1 1 33.8 33.715 2 0.0044271 41480 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.927 48.723 6901600 0 0 0 2655100 0 2545700 0 0 0 1700700 0 0 0 0 0 48387 4872 43386 405806;405807;405808;405809;405810 320211;320212;320213 320212 6223 2 SPMSSLQISNEK Unmodified 1319.6391 0.63911582 4872 Q9UER7 DAXX Death domain-associated protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 51.042 49.94 2 2.4385E-05 64330 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.01 90.967 70579000 0 45626000 0 3473700 0 0 5371800 0 0 5015200 0 0 0 0 11092000 48388 4872 43386 405811;405812;405813;405814;405815;405816;405817;405818;405819 320214;320215;320216;320217;320218;320219;320220;320221;320222 320216 9 SPMSTNSSVHTGSDVEQDAEK Unmodified 2204.9492 0.94916958 5005 Q9ULU4 ZMYND8 Protein kinase C-binding protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 31.227 31.936 3 1.8242E-11 33814 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.866 53.612 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48389 5005 43387 405820 320223 320223 1 SPMVEQAVQTGSADNLNAK Oxidation (M) 1974.9317 0.93166902 4218 Q9BX40 LSM14B Protein LSM14 homolog B yes yes 0 1 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching 10 0 20 2 2 2 2 1 2 2 2 1 1 2 1 47.72 47.817 2 4.5637E-75 53488 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 171.29 154.35 78639000 0 0 0 6004700 5048300 6705600 8990300 2796500 6352200 9720800 9679800 5667100 4924500 5329100 7419500 48390 4218 43388 405821;405822;405823;405824;405825;405826;405827;405828;405829;405830;405831;405832;405833;405834;405835;405836;405837;405838;405839;405840 320224;320225;320226;320227;320228;320229 320227 5694 6 SPMVEQAVQTGSADNLNAK Unmodified 1958.9368 0.9367544 4218 Q9BX40 LSM14B Protein LSM14 homolog B yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 2 1 1 1 1 1 1 1 57.384 56.115 2;3 5.6959E-84 64063 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 176.91 162.66 93050000 0 65418000 0 2396800 2549800 0 3526200 3240100 0 0 6300300 0 0 3290700 6328400 48391 4218 43388 405841;405842;405843;405844;405845;405846;405847;405848;405849 320230;320231;320232;320233;320234;320235;320236;320237 320235 8 SPNELVDDLFK Unmodified 1275.6347 0.63468237 5046 Q9UNZ2 NSFL1C NSFL1 cofactor p47 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.56 3.86 3 1 5 1 2 1 1 1 1 1 1 87.831 85.221 2 5.0049E-09 107590 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 152.69 137.03 625980000 51450000 530310000 13215000 0 0 0 0 0 0 0 0 5521200 0 5474500 20016000 48392 5046 43389 405850;405851;405852;405853;405854;405855;405856;405857;405858 320238;320239;320240;320241;320242;320243;320244;320245;320246;320247;320248;320249 320243 11 SPNLDLVETEIK Unmodified 1356.7137 0.71366097 4370 Q9H2M9 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 77.453 76.322 2 4.5204E-09 88031 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 160.72 133.39 817570000 7649100 575790000 7381500 8642600 11897000 20526000 16493000 16525000 15147000 26920000 17048000 24316000 19093000 16273000 33867000 48393 4370 43390 405859;405860;405861;405862;405863;405864;405865;405866;405867;405868;405869;405870;405871;405872;405873;405874 320250;320251;320252;320253;320254;320255;320256;320257;320258;320259;320260;320261;320262;320263;320264;320265 320254 14 SPNLWLK Unmodified 856.48069 0.48068833 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 59.57 59.849 2 0.023354 66979 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.673 44.981 199070000 0 0 0 0 0 21522000 0 20578000 0 18668000 22401000 26480000 20492000 27036000 41897000 48394 1986 43391 405875;405876;405877;405878;405879;405880;405881;405882 320266;320267;320268 320267 3 SPNPAAPALAAPAVVPGPVSTTDASPQSPPTPQTTLTPLQESPVISK Unmodified 4584.3963 0.39630317 4802 Q9P206 KIAA1522 Uncharacterized protein KIAA1522 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 91.407 91.505 4 6.4671E-28 106274 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 47.464 46.425 37846000 0 0 0 0 3877500 0 0 3061000 0 8541100 5692100 7903300 0 0 8770700 48395 4802 43392 405883;405884;405885;405886;405887;405888 320269;320270;320271;320272;320273;320274 320269 6 SPNQNVQQAAAGALR Unmodified 1523.7805 0.78045218 2346 Q13835 PKP1 Plakophilin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 47.299 47.213 2 3.5816E-59 53738 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 175.15 164.63 278330000 0 0 0 73401000 0 0 0 190960000 0 13964000 0 0 0 0 0 48396 2346 43393 405889;405890;405891;405892;405893;405894 320275;320276;320277;320278;320279;320280 320280 6 SPNRDFLTHVSAR Unmodified 1498.7641 0.76407383 248 O15067 PFAS Phosphoribosylformylglycinamidine synthase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 40.951 41.338 3 0.00039763 45271 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.759 57.701 92200000 0 0 0 0 0 9359000 0 5359400 0 0 0 14064000 4959300 10821000 47638000 48397 248 43394 405895;405896;405897;405898;405899;405900 320281;320282;320283;320284;320285 320285 5 SPPACSSSSSSLFSAVVAR Unmodified 1895.9047 0.90472599 1628 P50548 ERF ETS domain-containing transcription factor ERF yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.05 78.167 2 2.9445E-38 90359 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 132.86 121.64 74393000 0 0 0 0 6327500 0 6639800 6933200 5464200 7108700 9684600 10824000 5327900 7724600 8358600 48398 1628 43395 405901;405902;405903;405904;405905;405906;405907;405908;405909;405910;405911;405912 320286;320287;320288;320289;320290;320291;320292;320293;320294;320295;320296;320297 320291 12 SPPASPESWK Unmodified 1084.5189 0.51892433 3897 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 36.695 36.935 2 0.0041248 40398 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 73.985 64.279 101810000 0 0 0 8195100 0 7268600 7470900 6629400 5793100 11728000 10718000 10167000 10627000 6537100 16673000 48399 3897 43396 405913;405914;405915;405916;405917;405918;405919;405920;405921;405922;405923 320298;320299;320300;320301;320302;320303;320304;320305;320306;320307;320308 320301 11 SPPASSAASADQHSQSGSSSDNTER Unmodified 2460.0385 0.038529949 3275 Q8IY57 YAF2 YY1-associated factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 11.763 11.906 3 9.2362E-34 11335 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 100.94 100.25 102680000 0 0 0 9049300 5595300 5020500 6076800 5370600 5106600 8728400 5397300 15272000 7535500 8374600 21154000 48400 3275 43397 405924;405925;405926;405927;405928;405929;405930;405931;405932;405933;405934;405935 320309;320310;320311;320312;320313;320314;320315;320316;320317;320318;320319;320320;320321;320322 320322 14 SPPDQPAVPHPPPSTPIK Unmodified 1860.9734 0.9733979 1361 P35611 ADD1 Alpha-adducin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 55.386 54.734 3 6.4245E-05 61801 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 63.145 59.304 332220000 0 149010000 0 10742000 8534200 13220000 14278000 11117000 11203000 15330000 20664000 19259000 17875000 14485000 26501000 48401 1361 43398 405936;405937;405938;405939;405940;405941;405942;405943;405944;405945;405946;405947;405948;405949 320323;320324;320325;320326;320327;320328;320329;320330;320331;320332;320333;320334;320335;320336;320337;320338;320339;320340;320341 320340 17 SPPEALSGSLPPATTCPASSTPAPTIIPAPAAPGK Unmodified 3308.6962 0.69624335 3251 Q8IWZ8 SUGP1 SURP and G-patch domain-containing protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 85.35 85.519 3 1.7907E-05 98874 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 25.07 22.817 7875600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7875600 48402 3251 43399 405950 320342 320342 1 SPPEALVQGR Unmodified 1052.5615 0.56145784 4893 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 36.884 37.096 2 0.043301 41303 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 39.022 12.638 25871000 0 0 0 0 3158800 3349300 0 2375800 2538500 0 4398100 5015100 2976000 2059700 0 48403 4893 43400 405951;405952;405953;405954;405955;405956;405957;405958 320343 320343 1 SPPEGDTTLFLSR Unmodified 1418.7042 0.70415892 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.388 70.463 2 0.00066796 80791 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 73.781 45.054 98473000 0 0 0 4820800 7190800 7296600 7457300 7955700 8443400 8183700 8798000 10381000 8346300 8142700 11456000 48404 4139 43401 405959;405960;405961;405962;405963;405964;405965;405966;405967;405968;405969;405970 320344;320345;320346;320347;320348;320349;320350;320351;320352;320353 320347 10 SPPEPEIINQVQQNELK Unmodified 1962.0058 0.0058202445 5102 Q9Y2H2 INPP5F Phosphatidylinositide phosphatase SAC2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 2 2 2 2 2 2 76.505 76.613 2;3 0.000707 88477 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 51.235 42.922 109930000 0 0 0 0 6719200 7674700 5370500 7175800 10299000 9291500 9088100 12918000 9127700 13342000 18920000 48405 5102 43402 405971;405972;405973;405974;405975;405976;405977;405978;405979;405980;405981;405982;405983;405984;405985;405986;405987;405988;405989;405990;405991;405992 320354;320355;320356;320357;320358;320359;320360;320361 320354 7 SPPFFENLTLDLQPPK Unmodified 1841.9564 0.95635086 1126 P21399 ACO1 Cytoplasmic aconitate hydratase yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 98.003 93.744 2;3 2.2918E-11 115824 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.82 66.937 99395000 0 99395000 0 0 0 0 0 0 0 0 0 0 0 0 0 48406 1126 43403 405993;405994;405995 320362;320363;320364 320362 2 SPPGAGGSPPGAAVAPSALQLSPAAAAAAAHR Unmodified 2775.4416 0.44162406 1983 P78415 IRX3 Iroquois-class homeodomain protein IRX-3 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching By matching By matching 10 0 7 1 1 1 1 1 1 1 79.004 78.989 3 5.8979E-16 91277 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 49.088 45.809 28560000 0 0 0 1696200 4233500 2407200 4215200 4329400 0 0 0 7523700 0 4154900 0 48407 1983 43404 405996;405997;405998;405999;406000;406001;406002 320365;320366 320366 2 SPPGQVTEAVK Unmodified 1111.5873 0.58733824 1013 P15121 AKR1B1 Aldose reductase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.18 3.74 3 1 7 1 2 1 1 1 1 1 1 1 1 30.21 28.737 2 1.3267E-05 37347 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.71 71.137 1853000000 137880000 1405100000 4907100 9851300 0 0 10778000 0 0 0 60682000 42564000 10727000 46495000 124100000 48408 1013 43405 406003;406004;406005;406006;406007;406008;406009;406010;406011;406012;406013 320367;320368;320369;320370;320371;320372;320373;320374;320375;320376;320377;320378;320379;320380;320381 320370 14 SPPHHSGFQQYQQADASK Unmodified 2011.9137 0.91365119 3617 Q92540 SMG7 Protein SMG7 yes yes 0 0 0 By MS/MS 2 0 1 1 28.934 23.415 3 0.0022355 33228 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.208 38.306 4612700 4612700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48409 3617 43406 406014 320382;320383 320383 2 SPPIPYPR Unmodified 925.50215 0.50215205 2989 Q6W2J9 BCOR BCL-6 corepressor yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 50.429 50.816 2 0.036381 56350 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.866 40.85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48410 2989 43407 406015;406016 320384;320385 320385 2 SPPLLESPDATRESMVK Unmodified 1855.935 0.93496349 2483 Q15036 SNX17 Sorting nexin-17 yes yes 0 0 1 By MS/MS 2 0 1 1 68.979 63.079 3 0.011362 80342 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 38.017 28.36 26889000 0 26889000 0 0 0 0 0 0 0 0 0 0 0 0 0 48411 2483 43408 406017 320386 320386 1 SPPLSPVGTTPVK Unmodified 1278.7184 0.71835242 4185 Q9BVC5 C2orf49 Ashwin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54.774 53.687 2 3.1972E-05 60779 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 89.548 68.923 411330000 10615000 238680000 4643700 14180000 11305000 13258000 14241000 12296000 8788800 18271000 16925000 13938000 9344700 8268400 16574000 48412 4185 43409 406018;406019;406020;406021;406022;406023;406024;406025;406026;406027;406028;406029;406030;406031;406032 320387;320388;320389;320390;320391;320392;320393;320394;320395;320396;320397;320398;320399;320400;320401;320402;320403;320404 320396 16 SPPPEFAK Unmodified 871.44397 0.44396847 1683 P52294 KPNA1 Importin subunit alpha-5;Importin subunit alpha-5, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 26.806 26.031 2 0.028065 33132 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.923 54.399 259560000 0 172480000 0 5945500 0 11271000 0 7347000 0 12725000 0 18341000 13940000 0 17510000 48413 1683 43410 406033;406034;406035;406036;406037;406038;406039;406040;406041 320405;320406;320407;320408 320405 4 SPPPESVDTPTSTK Unmodified 1441.6937 0.69365381 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 28.084 28.386 2 0.00081393 30128 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 63.408 43.105 16152000 0 0 0 2431900 0 0 0 0 0 0 6027100 4034900 0 3657900 0 48414 1492 43411 406042;406043;406044;406045;406046;406047;406048 320409;320410;320411;320412;320413;320414 320411 6 SPPPGMGLNQNR Oxidation (M) 1282.6088 0.60881874 1151 P23246 SFPQ Splicing factor, proline- and glutamine-rich yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 18.687 18.914 2 0.00034395 19664 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 78.334 71.599 39221000 0 0 0 0 2116800 4575900 4854600 0 3162900 4583100 4002700 6505000 0 3190400 6229400 48415 1151 43412 406049;406050;406051;406052;406053;406054;406055;406056;406057 320415;320416;320417;320418;320419;320420;320421 320416 1658 7 SPPPGMGLNQNR Unmodified 1266.6139 0.61390412 1151 P23246 SFPQ Splicing factor, proline- and glutamine-rich yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 34.457 34.657 2 0.00062481 37507 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 76.827 43.431 77539000 0 0 0 4054100 2887100 0 6661200 6520400 3796400 7079700 10474000 9909200 3599600 6653800 15903000 48416 1151 43412 406058;406059;406060;406061;406062;406063;406064;406065;406066;406067;406068 320422;320423;320424;320425;320426;320427;320428 320423 5 SPPPPTHSTQLGAPSR Unmodified 1628.8271 0.82706802 2450 Q14814 MEF2D Myocyte-specific enhancer factor 2D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 28.563 28.783 3 0.00090156 30739 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.193 51.193 36393000 0 0 0 0 0 6896300 0 0 0 0 0 0 15569000 13927000 0 48417 2450 43413 406069;406070;406071 320429 320429 1 SPPPPTHSTQLGAPSRKPDLR Unmodified 2238.1869 0.18691293 2450 Q14814 MEF2D Myocyte-specific enhancer factor 2D yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 1 2 2 2 2 2 2 2 1 2 34.21 34.396 4;5 1.8165E-05 36577 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.529 42.068 319350000 0 0 0 17254000 12088000 13373000 24641000 23212000 20973000 26655000 58132000 33311000 30056000 10869000 48786000 48418 2450 43414 406072;406073;406074;406075;406076;406077;406078;406079;406080;406081;406082;406083;406084;406085;406086;406087;406088;406089;406090;406091;406092;406093 320430;320431;320432;320433;320434;320435;320436;320437;320438 320433 7 SPPREGSQGELTPANSQSR Unmodified 1996.9562 0.95624429 2232 Q13098 GPS1 COP9 signalosome complex subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 4 12 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 23.284 22.464 3 8.9852E-18 28050 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 110.77 105.56 463540000 24566000 19355000 94885000 15147000 9314600 31232000 18884000 20565000 16569000 33932000 42836000 33756000 27417000 34927000 40158000 48419 2232 43415 406094;406095;406096;406097;406098;406099;406100;406101;406102;406103;406104;406105;406106;406107;406108;406109 320439;320440;320441;320442;320443;320444;320445;320446;320447;320448;320449;320450;320451;320452;320453;320454;320455 320450 17 SPPREGSQGELTPANSQSRMSTNM 2 Oxidation (M) 2593.1497 0.14967708 2232 Q13098 GPS1 COP9 signalosome complex subunit 1 yes yes 0 2 2 By MS/MS 2 0 1 1 30.043 24.423 3 0.003962 34220 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.223 51.646 10881000 10881000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48420 2232 43416 406110 320456;320457 320456 3628;3629 2 SPPREGSQGELTPANSQSRMSTNM Oxidation (M) 2577.1548 0.15476246 2232 Q13098 GPS1 COP9 signalosome complex subunit 1 yes yes 0 1 2 By MS/MS 2 0 2 2 39.633 33.01 3 0.00037667 46192 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.318 61.309 43772000 43772000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48421 2232 43416 406111;406112 320458;320459;320460 320459 3628;3629 3 SPPREGSQGELTPANSQSRMSTNM Unmodified 2561.1598 0.15984783 2232 Q13098 GPS1 COP9 signalosome complex subunit 1 yes yes 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 49.507 43.585 3 0.00036024 59663 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.524 54.164 55957000 45495000 0 10462000 0 0 0 0 0 0 0 0 0 0 0 0 48422 2232 43416 406113;406114 320461 320461 1 SPPSTGSTYGSSQK Unmodified 1382.6314 0.6313879 5122 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.661 13.842 2 6.9314E-14 12534 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 114.86 99.712 51046000 0 0 0 4647900 3048900 0 2878600 3204200 1710300 4349300 3618800 6248100 7990400 6801800 6548000 48423 5122 43417 406115;406116;406117;406118;406119;406120;406121;406122;406123;406124;406125;406126 320462;320463;320464;320465;320466;320467;320468;320469;320470;320471;320472;320473;320474 320465 13 SPPSVQSLAMR Unmodified 1171.6019 0.60194245 3912 Q96KQ7 EHMT2 Histone-lysine N-methyltransferase EHMT2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.059 56.185 2 0.0055796 63793 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 58.699 33.14 53000000 0 0 0 3045000 3732400 3313500 3679900 3395900 2838500 5184000 6832400 5892300 3360500 6480900 5244300 48424 3912 43418 406127;406128;406129;406130;406131;406132;406133;406134;406135;406136;406137;406138 320475;320476;320477;320478;320479 320475 5 SPPSVQSLAMR Oxidation (M) 1187.5969 0.59685707 3912 Q96KQ7 EHMT2 Histone-lysine N-methyltransferase EHMT2 yes yes 0 1 0 By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 46.212 46.374 2 0.015574 52088 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 41.399 33.474 95863000 0 0 0 9490300 6333500 6908900 6793800 0 8364500 10358000 9661700 17237000 11467000 0 9248900 48425 3912 43418 406139;406140;406141;406142;406143;406144;406145;406146;406147;406148 320480 320480 5412 1 SPPVLGSAAASPVHLK Unmodified 1529.8566 0.85657723 165 O00512 BCL9 B-cell CLL/lymphoma 9 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 7.71 3.56 4 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 65.46 63.669 2;3 5.0517E-46 86054 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 136.81 129.28 286610000 68974000 44870000 14937000 0 7744600 10298000 9774100 11368000 12163000 18125000 12171000 17955000 6780900 15238000 36212000 48426 165 43419 406149;406150;406151;406152;406153;406154;406155;406156;406157;406158;406159;406160;406161;406162;406163;406164;406165 320481;320482;320483;320484;320485;320486;320487;320488;320489;320490;320491;320492;320493;320494;320495;320496 320487 13 SPPVTLGPNLAPTSR Unmodified 1505.8202 0.82019173 2568 Q15735 INPP5J Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.254 69.332 2 8.0339E-23 80339 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 119.76 98.392 63509000 0 0 0 4088700 4181500 4698000 5057600 4092800 4000000 5743800 7068000 6667000 5425100 4805400 7681500 48427 2568 43420 406166;406167;406168;406169;406170;406171;406172;406173;406174;406175;406176;406177 320497;320498;320499;320500;320501;320502;320503;320504;320505;320506;320507;320508;320509;320510;320511 320510 15 SPPYTAFLGNLPYDVTEESIK Unmodified 2340.1525 0.15254406 1166 P23588 EIF4B Eukaryotic translation initiation factor 4B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.29 0.452 5 2 2 4 1 97.635 92.66 2;3 7.306E-107 115904 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 231.71 216.72 1203800000 45439000 1154200000 4190800 0 0 0 0 0 0 0 0 0 0 0 0 48428 1166 43421 406178;406179;406180;406181;406182;406183;406184 320512;320513;320514;320515;320516;320517;320518 320516 6 SPPYTDDVK Unmodified 1020.4764 0.47639081 34 A7E2V4 ZSWIM8 Zinc finger SWIM domain-containing protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 26.382 26.78 2 0.03116 28612 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 47.869 30.021 14037000 0 0 0 0 0 0 0 6269500 0 0 0 0 2781200 0 4986300 48429 34 43422 406185;406186;406187 320519;320520 320520 2 SPQAPDPEEEENRDSQQPGK Unmodified 2236.9832 0.9832469 4499 Q9HB96 FANCE Fanconi anemia group E protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 27.525 27.71 3 0.00051845 29421 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 44.587 41.147 26243000 0 0 0 3539100 4450000 0 0 0 0 0 0 11425000 0 0 6828800 48430 4499 43423 406188;406189;406190;406191 320521;320522;320523;320524 320522 4 SPQAVLQLGVNNEDSK Unmodified 1697.8584 0.85842773 5281 Q9Y6G5 COMMD10 COMM domain-containing protein 10 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS 6.38 3.64 1 3 4 4 1 1 1 1 67.758 65.028 2;3 1.4312E-81 78921 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 205.96 205.96 80050000 0 71859000 0 0 0 0 2354700 2478100 0 0 3358300 0 0 0 0 48431 5281 43424 406192;406193;406194;406195;406196;406197;406198;406199 320525;320526;320527;320528;320529;320530 320527 5 SPQCSNPGLCVQPHHIGVSVK Unmodified 2300.1154 0.11540424 2199 Q12857 NFIA Nuclear factor 1 A-type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.57 3.96 3 4 2 1 1 1 1 1 57.474 54.785 3;4 2.1164E-13 75289 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.79 92.352 127590000 84824000 0 1982200 0 0 0 0 0 0 0 6988800 0 5867300 9308400 18621000 48432 2199 43425 406200;406201;406202;406203;406204;406205;406206 320531;320532;320533;320534 320532 3 SPQDEGLHLLK Unmodified 1235.651 0.65100113 3065 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.845 52.988 3 0.0048496 59038 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 53.567 30.65 190690000 0 0 0 9348000 5702100 15655000 11331000 8766700 11805000 18181000 20991000 25040000 23114000 11604000 29149000 48433 3065 43426 406207;406208;406209;406210;406211;406212;406213;406214;406215;406216;406217;406218 320535;320536;320537;320538 320538 4 SPQDLASTSR Unmodified 1060.5149 0.51490158 4507 Q9HC52 CBX8 Chromobox protein homolog 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 19.622 19.854 2 0.0027876 20525 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 80.102 42.942 102240000 0 0 0 0 8800600 10627000 8329700 7090200 7052100 8855100 10404000 11886000 8588400 8277600 12327000 48434 4507 43427 406219;406220;406221;406222;406223;406224;406225;406226;406227;406228;406229 320539;320540;320541;320542;320543;320544;320545;320546;320547;320548 320542 9 SPQEEALQR Unmodified 1056.52 0.51998696 3693 Q92974 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.121 20.322 2 1.5364E-13 20951 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 167.23 82.017 374270000 0 0 0 16716000 19703000 23703000 26075000 24455000 19019000 38569000 49048000 42563000 41877000 28308000 44228000 48435 3693 43428 406230;406231;406232;406233;406234;406235;406236;406237;406238;406239;406240;406241 320549;320550;320551;320552;320553;320554;320555;320556;320557;320558;320559;320560 320551 12 SPQENLREPK Unmodified 1196.6149 0.61494998 4187 Q9BVI0 PHF20 PHD finger protein 20 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 20.411 17.198 3 0.049499 21874 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 49.35 31.685 23346000 0 18469000 4876300 0 0 0 0 0 0 0 0 0 0 0 0 48436 4187 43429 406242;406243 320561 320561 0 SPQEPTPSVIK Unmodified 1181.6292 0.62920306 1233 P28324 ELK4 ETS domain-containing protein Elk-4 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 39.954 40.099 2 0.015182 44591 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 47.187 30.223 15032000 0 0 0 1724400 0 0 0 0 2769800 0 3987200 0 3426800 3124300 0 48437 1233 43430 406244;406245;406246;406247;406248 320562 320562 1 SPQESLSDLGAIESLRVPGK Unmodified 2082.0957 0.095697884 3892 Q96JG6 CCDC132 Coiled-coil domain-containing protein 132 yes yes 0 0 1 By MS/MS By matching By matching By MS/MS 8 3.46 1 3 1 1 1 1 84.021 83.543 3 8.727E-28 96309 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.33 107.48 21088000 0 0 4267500 0 0 0 0 1659100 0 0 0 5271600 0 0 9889500 48438 3892 43431 406249;406250;406251;406252 320563;320564 320563 2 SPQESTGDPGNSSSVSEGK Unmodified 1848.7973 0.79734361 4900 Q9UHF7 TRPS1 Zinc finger transcription factor Trps1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.35 16.528 2 1.0927E-06 14865 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 96.591 91.312 46189000 0 0 0 2715300 1880000 3235100 2103300 3066600 2078900 4597400 6049500 5598700 4004800 3967200 6891800 48439 4900 43432 406253;406254;406255;406256;406257;406258;406259;406260;406261;406262;406263;406264 320565;320566;320567;320568;320569;320570;320571;320572;320573;320574 320572 10 SPQFINLK Unmodified 945.52837 0.5283668 3631 Q92576 PHF3 PHD finger protein 3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 59.441 59.77 2 0.0060433 68493 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 104.21 79.286 55714000 0 0 0 0 0 0 0 0 0 0 0 0 16945000 15848000 22922000 48440 3631 43433 406265;406266;406267;406268 320575;320576;320577 320576 2 SPQISMSDIDLNLK Oxidation (M) 1575.7814 0.78142296 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 73.649 73.105 2 8.5586E-12 84044 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 100.04 89.514 209490000 0 63787000 0 5939900 7623000 9724900 8973100 10617000 12416000 16842000 12986000 18781000 12754000 14030000 15013000 48441 2172 43434 406269;406270;406271;406272;406273;406274;406275;406276;406277;406278;406279;406280;406281;406282 320578;320579;320580;320581;320582;320583;320584;320585;320586;320587;320588;320589;320590;320591 320581 3539 13 SPQISMSDIDLNLK Unmodified 1559.7865 0.78650834 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 83.379 82.806 2 1.9427E-58 102256 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 229.29 201.28 187630000 0 103130000 0 1307700 2784300 4844600 2822300 8342700 0 7435200 7412400 9497400 5866300 10092000 24100000 48442 2172 43434 406283;406284;406285;406286;406287;406288;406289;406290;406291;406292;406293;406294;406295 320592;320593;320594;320595;320596;320597;320598 320593 7 SPQLLNQPVSWCK Unmodified 1555.7817 0.78169773 895 P09884 POLA1 DNA polymerase alpha catalytic subunit yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 73.474 73.722 2 0.011895 84389 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.829 24.079 23190000 0 0 0 0 0 0 0 0 0 0 7198800 0 0 6285400 9705700 48443 895 43435 406296;406297;406298 320599;320600 320599 2 SPQLSDFGLER Unmodified 1247.6146 0.61461563 3256 Q8IX90 SKA3 Spindle and kinetochore-associated protein 3 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 70.355 70.438 2 0.0011678 80722 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 79.974 71.111 49867000 0 0 0 2341800 2553900 0 4331900 3231800 4603100 4124800 5479100 7009700 5135400 4298000 6757700 48444 3256 43436 406299;406300;406301;406302;406303;406304;406305;406306;406307;406308;406309 320601;320602;320603;320604;320605;320606;320607;320608;320609 320601 9 SPQLSLSPRPASPK Unmodified 1463.8096 0.80962704 690 O95785 WIZ Protein Wiz yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 2 1 1 2 2 2 2 2 1 2 1 2 45.252 45.429 2;3 5.4365E-05 51730 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 91.207 78.329 366720000 0 0 0 23231000 23752000 22908000 29226000 26391000 24456000 31372000 45409000 35043000 38314000 24343000 42278000 48445 690 43437 406310;406311;406312;406313;406314;406315;406316;406317;406318;406319;406320;406321;406322;406323;406324;406325;406326;406327;406328;406329 320610;320611;320612;320613;320614;320615;320616;320617;320618;320619;320620;320621;320622;320623 320622 12 SPQNQYPAELMR Oxidation (M) 1448.6718 0.67181293 1334 P33993 MCM7 DNA replication licensing factor MCM7 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 41.354 41.517 2 2.764E-05 46360 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 90.685 71.37 137570000 0 0 0 0 11073000 15438000 15717000 0 0 24847000 27227000 0 0 0 43266000 48446 1334 43438 406330;406331;406332;406333;406334;406335;406336 320624;320625;320626;320627;320628;320629;320630;320631 320624 2010 8 SPQNQYPAELMR Unmodified 1432.6769 0.67689831 1334 P33993 MCM7 DNA replication licensing factor MCM7 yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching 10 0 8 1 1 1 1 1 1 1 1 56.506 56.701 2 0.001712 63935 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 65.627 52.035 133600000 0 0 0 4735000 0 12860000 0 0 0 13427000 20318000 22444000 16896000 14255000 28663000 48447 1334 43438 406337;406338;406339;406340;406341;406342;406343;406344 320632;320633 320633 1 SPQPDPVDTPASTK Unmodified 1438.694 0.69398816 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.253 31.442 2 3.9759E-05 34234 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 84.479 57.965 102500000 0 0 0 6800200 6445400 7524500 7920300 7223500 6056200 7373700 9883600 14813000 8072800 8651300 11731000 48448 1492 43439 406345;406346;406347;406348;406349;406350;406351;406352;406353;406354;406355;406356 320634;320635;320636;320637;320638;320639;320640;320641;320642;320643;320644;320645 320636 12 SPQPDPVGTPTIFKPQSK Unmodified 1923.0102 0.010177341 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 64.275 64.377 3 0.001456 73557 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 44 25.636 74983000 0 0 0 4679900 4720700 0 5490500 5710900 4739900 6515600 10132000 8854300 5688800 8403600 10047000 48449 1492 43440 406357;406358;406359;406360;406361;406362;406363;406364;406365;406366;406367 320646;320647;320648;320649;320650;320651;320652;320653 320652 7 SPQPDPVK Unmodified 866.44978 0.44978213 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 14.252 14.65 2 0.0148 13273 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.905 18.474 33204000 0 0 0 0 0 0 0 0 0 0 12128000 0 0 7977200 13098000 48450 1492 43441 406368;406369;406370 320654;320655 320654 2 SPQPESFK Unmodified 918.4447 0.44469675 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 21.382 21.643 2 0.033332 22425 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 53.775 16.616 59519000 0 0 0 5665600 0 0 6462500 5892400 4842700 8932200 8439400 9559700 0 0 9724700 48451 1492 43442 406371;406372;406373;406374;406375;406376;406377;406378 320656 320656 1 SPQPPVEEEDEHFDDTVVCLDTYNCDLHFK Unmodified 3634.5504 0.55044333 2046 Q00839 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 0 0 0 By MS/MS 2 0 2 2 88.689 80.558 3;4 3.3644E-27 104646 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.304 80.788 155620000 155620000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48452 2046 43443 406379;406380 320657;320658 320657 2 SPQPSVPEQSDNELEQAGK Unmodified 2038.9443 0.9443422 2724 Q5FWF5 ESCO1 N-acetyltransferase ESCO1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 48.294 48.593 2 4.1258E-08 54852 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 80.522 66.558 19290000 0 0 0 0 0 0 0 0 0 9820100 9469800 0 0 0 0 48453 2724 43444 406381;406382 320659;320660 320660 2 SPQPVNDDNIR Unmodified 1253.6 0.60002819 3134 Q86TC9 MYPN Myopalladin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 26.606 26.777 2 0.0088987 28523 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 87.149 65.685 180180000 0 0 0 14820000 15629000 19881000 0 18740000 14788000 18279000 17823000 23857000 20847000 15517000 0 48454 3134 43445 406383;406384;406385;406386;406387;406388;406389;406390;406391;406392 320661;320662;320663 320662 0 SPQPVNDDNIRETK Unmodified 1611.7853 0.78526278 3134 Q86TC9 MYPN Myopalladin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.56 1 1 13 2 1 1 1 1 1 1 1 1 2 1 1 1 24.649 24.284 2;3 2.1292E-14 25894 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 116.63 110.02 697120000 0 83244000 0 48502000 43928000 46056000 54429000 48780000 36681000 54058000 52259000 63168000 58430000 40572000 67009000 48455 3134 43446 406393;406394;406395;406396;406397;406398;406399;406400;406401;406402;406403;406404;406405;406406;406407 320664;320665;320666;320667;320668;320669;320670;320671;320672;320673;320674;320675;320676;320677;320678;320679;320680 320670 14 SPQPVPSPRPQSQPPHSSPSPR Unmodified 2346.1829 0.18289018 2171 Q09472 EP300 Histone acetyltransferase p300 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 1 1 1 2 2 2 2 2 2 2 2 32.061 32.322 3;4 3.327E-20 35462 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 64.87 60.708 323180000 0 0 0 13914000 15757000 19896000 22024000 28733000 26598000 28830000 32991000 45737000 31343000 19299000 38058000 48456 2171 43447 406408;406409;406410;406411;406412;406413;406414;406415;406416;406417;406418;406419;406420;406421;406422;406423;406424;406425;406426;406427 320681;320682;320683;320684;320685;320686;320687;320688;320689;320690;320691;320692;320693;320694;320695;320696;320697;320698 320698 16 SPQQSAALPR Unmodified 1053.5567 0.55670682 2885 Q6IBW4 NCAPH2 Condensin-2 complex subunit H2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 24.788 25.038 2 0.0008873 26996 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 117.89 70.041 53863000 0 0 0 0 3069600 5726900 4216200 3379700 0 5478100 6180200 5497300 5239400 4186000 10890000 48457 2885 43448 406428;406429;406430;406431;406432;406433;406434;406435;406436;406437;406438 320699;320700;320701;320702;320703;320704;320705;320706;320707;320708;320709 320699 11 SPQRPSDWSK Unmodified 1186.5731 0.57308516 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 21.783 17.614 2;3 0.0029135 25357 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.2 44.719 88128000 84085000 0 4043400 0 0 0 0 0 0 0 0 0 0 0 0 48458 2804 43449 406439;406440;406441 320710;320711 320711 2 SPQSDPADTPTNTK Unmodified 1457.6634 0.66341631 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.688 14.856 2 2.8942E-27 14161 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 191.79 185.82 128580000 0 0 0 7672000 5934600 7494100 7889300 8467000 9267500 11780000 12262000 13209000 12016000 10159000 22428000 48459 1492 43450 406442;406443;406444;406445;406446;406447;406448;406449;406450;406451;406452;406453 320712;320713;320714;320715;320716;320717;320718;320719;320720;320721;320722;320723 320713 12 SPQSNSPVLLSR Unmodified 1283.6834 0.68336389 3842 Q96FZ2 HMCES Embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.771 45.941 2 3.2456E-06 50422 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 111.5 52.9 94669000 0 0 0 7136700 4991500 6955700 7512700 6875100 4530000 9254500 11462000 9115600 8599700 7119000 11116000 48460 3842 43451 406454;406455;406456;406457;406458;406459;406460;406461;406462;406463;406464;406465 320724;320725;320726;320727;320728;320729;320730;320731;320732;320733;320734;320735;320736;320737;320738 320729 15 SPQTLAPVGEDAMK Oxidation (M) 1458.7024 0.70244436 3663 Q92797 SYMPK Symplekin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 6 1 1 1 1 1 1 40.319 40.577 2 0.0025342 45261 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 47.154 24.414 25883000 0 0 0 0 0 0 3754700 2623100 2653400 3152300 0 0 0 4821100 8878700 48461 3663 43452 406466;406467;406468;406469;406470;406471 320739 320739 5194 1 SPQTPELVEALAFR Unmodified 1556.8199 0.81985738 4762 Q9NZB2 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 88.433 88.414 2 0.013507 101841 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 37.995 34.65 3142600 0 0 0 0 518490 1399000 0 0 0 0 0 0 0 1225000 0 48462 4762 43453 406472;406473;406474 320740 320740 1 SPQTPSQLAGMLAGPAAAASIK Unmodified 2066.083 0.083024708 165 O00512 BCL9 B-cell CLL/lymphoma 9 protein yes yes 0 0 0 By MS/MS 10 0 1 1 86.983 87.142 3 0.0063868 100742 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 26.204 20.082 3369600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3369600 48463 165 43454 406475 320741;320742 320742 2 SPQTPSQMVPLPSANPPGPLK Unmodified 2142.1143 0.11432484 3155 Q86UU0 BCL9L B-cell CLL/lymphoma 9-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 9.53 1.88 1 16 1 1 1 1 1 2 1 1 1 2 2 2 1 80.479 80.274 2;3 5.5729E-12 92127 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 110.98 104.1 131770000 0 31640000 0 2152800 4059100 6023500 3145800 11236000 4830800 12504000 6041400 15962000 8193600 17212000 8768000 48464 3155 43455 406476;406477;406478;406479;406480;406481;406482;406483;406484;406485;406486;406487;406488;406489;406490;406491;406492 320743;320744;320745;320746;320747;320748;320749;320750;320751 320749 8 SPQTPSQMVPLPSANPPGPLK Oxidation (M) 2158.1092 0.10923946 3155 Q86UU0 BCL9L B-cell CLL/lymphoma 9-like protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 74.156 74.263 3 1.3059E-09 85579 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 71.894 64.442 147020000 0 0 0 0 16662000 0 20089000 0 22841000 0 22196000 0 21434000 19143000 24651000 48465 3155 43455 406493;406494;406495;406496;406497;406498;406499 320752;320753;320754;320755;320756;320757;320758 320758 4772 7 SPQTSILK Unmodified 872.49673 0.49673232 3414 Q8ND24 RNF214 RING finger protein 214 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 1 1 2 1 1 1 1 2 2 1 30.252 30.46 2 0.011003 32376 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 77.923 39.789 279340000 0 0 0 18897000 12373000 20519000 14820000 32736000 12822000 19549000 21893000 28707000 38729000 34826000 23465000 48466 3414 43456 406500;406501;406502;406503;406504;406505;406506;406507;406508;406509;406510;406511;406512;406513;406514 320759;320760;320761;320762;320763;320764;320765;320766 320766 8 SPQVHFPK Unmodified 938.4974 0.49740102 5138 Q9Y337 KLK5 Kallikrein-5 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 33.532 33.854 2 0.036695 37118 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 51.736 32.099 7950800 0 0 0 0 0 0 0 0 0 0 0 0 5874300 2076500 0 48467 5138 43457 406515;406516 320767 320767 1 SPQVLGSSLSVR Unmodified 1228.6776 0.67755023 3155 Q86UU0 BCL9L B-cell CLL/lymphoma 9-like protein yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 59.282 59.274 2 1.4006E-05 66688 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 107.11 70.557 71324000 0 0 0 10385000 0 0 17308000 13788000 12628000 0 0 0 0 17215000 0 48468 3155 43458 406517;406518;406519;406520;406521 320768;320769;320770 320769 2 SPQVPAAQQMLNFPEK Unmodified 1783.8927 0.89270474 3687 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 78.887 78.935 2 2.1776E-06 91163 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 93.011 76.873 106780000 0 0 0 4103000 8352400 10129000 4505800 9118900 5103200 10355000 12981000 0 8652000 12864000 20613000 48469 3687 43459 406522;406523;406524;406525;406526;406527;406528;406529;406530;406531;406532 320771;320772;320773;320774;320775;320776;320777;320778;320779;320780;320781 320771 11 SPQVPAAQQMLNFPEK Oxidation (M) 1799.8876 0.88761936 3687 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 66.026 65.969 2 0.00011796 75366 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 72.29 65.592 24107000 0 0 0 0 8902100 0 0 6253100 8951800 0 0 0 0 0 0 48470 3687 43459 406533;406534;406535;406536 320782;320783;320784;320785 320783 5246 4 SPRDWEQFEYK Unmodified 1483.6732 0.67319314 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 67.97 59.676 3 0.043091 80001 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 30.563 21.369 25745000 25745000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48471 2459 43460 406537 320786 320786 1 SPRDYSNFDQEFLNEK Unmodified 1987.8912 0.89118442 2116 Q05655 PRKCD Protein kinase C delta type;Protein kinase C delta type regulatory subunit;Protein kinase C delta type catalytic subunit yes yes 0 0 1 By MS/MS 2 0 1 1 73.919 70.967 3 0.0001696 86771 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 74.428 67.58 5236100 0 0 5236100 0 0 0 0 0 0 0 0 0 0 0 0 48472 2116 43461 406538 320787;320788 320788 2 SPRPDHPGTPPHK Unmodified 1421.7164 0.71639536 1275 P30291 WEE1 Wee1-like protein kinase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.9408 7.0644 3 0.023011 3984 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 33.685 17.929 40538000 0 0 0 1548200 1708000 2394300 1848000 3734300 2606300 5157600 5210000 3581500 4720500 3062800 4966900 48473 1275 43462 406539;406540;406541;406542;406543;406544;406545;406546;406547;406548;406549;406550 320789;320790 320789 2 SPRPGSSAPEHSPR Unmodified 1460.712 0.71203826 489 O75385 ULK1 Serine/threonine-protein kinase ULK1 yes yes 0 0 1 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 7.2597 7.4882 3 0.0014091 6094 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 38.995 24.119 16788000 0 0 0 0 0 0 0 3127800 0 0 8091100 2484900 0 3083900 0 48474 489 43463 406551;406552;406553;406554 320791 320791 1 SPRVVSTSLDCLQK Unmodified 1588.8243 0.82429083 5276 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 yes yes 0 0 1 By MS/MS 2 0 1 1 61.555 53.299 3 0.021744 72196 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 26.209 21.642 5765200 5765200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48475 5276 43464 406555 320792 320792 1 SPSAGDVHILTGFAK Unmodified 1498.778 0.77799256 5102 Q9Y2H2 INPP5F Phosphatidylinositide phosphatase SAC2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 71.304 70.745 3 0.00056895 92798 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.522 34.928 87172000 17418000 0 0 3250200 4081400 5426500 3575800 5550700 5031900 7830600 5983900 7742800 6207200 5957600 9115200 48476 5102 43465 406556;406557;406558;406559;406560;406561;406562;406563;406564;406565;406566;406567;406568 320793;320794 320794 2 SPSAQELK Unmodified 858.4447 0.44469675 5029 Q9UNE7 STUB1 E3 ubiquitin-protein ligase CHIP yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching 7.25 3.9 1 3 8 2 1 1 1 1 1 1 1 1 1 1 14.603 13.881 2 0.012202 18670 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 105.81 54.021 837500000 40848000 739280000 1734600 0 0 6411800 6987000 2924000 0 0 14949000 2834400 3655600 14295000 3583700 48477 5029 43466 406569;406570;406571;406572;406573;406574;406575;406576;406577;406578;406579;406580 320795;320796;320797;320798 320797 3 SPSAQLMEQVAQLK Unmodified 1528.7919 0.79192807 2391 Q14203 DCTN1 Dynactin subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS 6.82 3.81 5 2 10 1 4 2 1 1 1 1 1 1 1 1 1 1 81.822 80.17 2;3 3.0841E-77 101031 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 248.21 214.25 345120000 68262000 212840000 16295000 0 1648500 3223400 1587000 3706500 0 4912500 5219800 5971100 2474800 5954000 13022000 48478 2391 43467 406581;406582;406583;406584;406585;406586;406587;406588;406589;406590;406591;406592;406593;406594;406595;406596;406597 320799;320800;320801;320802;320803;320804;320805;320806;320807;320808;320809;320810;320811 320806 12 SPSAQLMEQVAQLK Oxidation (M) 1544.7868 0.78684269 2391 Q14203 DCTN1 Dynactin subunit 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 66.696 65.084 2 2.2949E-34 82881 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 158.04 138.38 162090000 19552000 79026000 8528000 2888000 0 0 0 2937400 3310000 6807600 8421800 9899200 5790400 4820500 10107000 48479 2391 43467 406598;406599;406600;406601;406602;406603;406604;406605;406606;406607;406608;406609;406610 320812;320813;320814;320815;320816;320817;320818;320819;320820;320821;320822;320823;320824 320813 3893 12 SPSASITDEDSNV Unmodified 1320.5681 0.56811894 3180 Q86W92 PPFIBP1 Liprin-beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.103 43.278 2 0.0027284 48565 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 57.249 52.637 551280000 0 0 0 30472000 34239000 34817000 39827000 36706000 28716000 47195000 73141000 85783000 46930000 40533000 52927000 48480 3180 43468 406611;406612;406613;406614;406615;406616;406617;406618;406619;406620;406621;406622 320825;320826;320827 320825 3 SPSDLHISPLAK Unmodified 1263.6823 0.68230126 690 O95785 WIZ Protein Wiz yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 52.653 52.796 2;3 1.3865E-08 58858 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 115.42 90.644 744250000 0 0 0 43966000 42925000 55988000 52210000 43982000 46179000 78263000 72265000 89587000 84069000 57986000 76834000 48481 690 43469 406623;406624;406625;406626;406627;406628;406629;406630;406631;406632;406633;406634;406635;406636;406637;406638;406639;406640;406641;406642;406643;406644;406645;406646 320828;320829;320830;320831;320832;320833;320834;320835;320836;320837;320838;320839;320840;320841;320842;320843 320839 12 SPSDPSHVSVPPPPLLLPAATTR Unmodified 2335.2536 0.25359551 3419 Q8NDX5 PHC3 Polyhomeotic-like protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 84.499 84.605 3 8.9326E-27 97957 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 96.718 88.43 129650000 0 0 0 0 8529800 11672000 8536200 10062000 9732900 17281000 11313000 13502000 8552800 10379000 20094000 48482 3419 43470 406647;406648;406649;406650;406651;406652;406653;406654;406655;406656;406657 320844;320845;320846;320847;320848;320849;320850;320851;320852;320853;320854;320855;320856;320857;320858;320859;320860 320845 17 SPSDSSTASTPVAEQIER Unmodified 1860.8701 0.87011462 2621 Q16643 DBN1 Drebrin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.651 46.817 2 4.508E-47 52169 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 187.57 181.13 143090000 0 0 0 6029600 8044700 9337500 9095400 5536700 6220900 13795000 19114000 22630000 14663000 11638000 16980000 48483 2621 43471 406658;406659;406660;406661;406662;406663;406664;406665;406666;406667;406668;406669 320861;320862;320863;320864;320865;320866;320867;320868;320869;320870;320871;320872 320870 12 SPSDVSASESPQHDVVDLGSTAPLK Unmodified 2522.2136 0.21364077 3376 Q8N9M5 TMEM102 Transmembrane protein 102 yes yes 0 0 0 By MS/MS 3 0 1 1 73.671 69.724 3 7.6722E-05 84289 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 52.483 51.256 9531700 0 9531700 0 0 0 0 0 0 0 0 0 0 0 0 0 48484 3376 43472 406670 320873 320873 1 SPSEAADEVCALEEK Unmodified 1633.7141 0.71413125 4428 Q9H6Z4 RANBP3 Ran-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.238 58.496 2 1.6385E-83 65887 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 186.58 179.65 81124000 0 0 0 0 0 6232600 6569100 6254700 2795500 7976800 10511000 9164000 6450300 9341700 15829000 48485 4428 43473 406671;406672;406673;406674;406675;406676;406677;406678;406679;406680;406681;406682 320874;320875;320876;320877;320878;320879;320880;320881;320882;320883;320884;320885 320877 12 SPSEESAPTTSPESVSGSVPSSGSSGR Unmodified 2549.1365 0.13651266 1745 P54725 RAD23A UV excision repair protein RAD23 homolog A yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 45.341 45.842 3 0.0068018 51161 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 22.456 10.834 16990000 0 0 0 0 0 0 0 0 0 0 0 8613400 0 8376300 0 48486 1745 43474 406683;406684 320886 320886 1 SPSEGQTATTSPR Unmodified 1317.6161 0.61607219 1181 P25054 APC Adenomatous polyposis coli protein yes yes 0 0 0 By MS/MS 10 0 1 1 10.758 10.605 2 0.0096923 9284 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 58.37 39.127 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48487 1181 43475 406685 320887 320887 1 SPSELLEICELSQEK Unmodified 1760.8502 0.8502308 4602 Q9NRG4 SMYD2 N-lysine methyltransferase SMYD2 yes yes 0 0 0 By MS/MS By MS/MS 2.4 0.49 3 2 4 1 85.816 82.112 2;3 1.1593E-49 101917 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 204.32 175.26 205730000 0 200110000 5618100 0 0 0 0 0 0 0 0 0 0 0 0 48488 4602 43476 406686;406687;406688;406689;406690 320888;320889;320890;320891 320888 4 SPSFASEWDEIEK Unmodified 1523.678 0.67800374 3645 Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 82.067 78.065 2 0.017017 97066 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.302 68.301 35918000 0 35918000 0 0 0 0 0 0 0 0 0 0 0 0 0 48489 3645 43477 406691;406692 320892;320893 320892 1 SPSGGAAGPLLTPSQSLDGSRR Unmodified 2110.0767 0.076693777 3789 Q96CX2 KCTD12 BTB/POZ domain-containing protein KCTD12 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 59.17 59.541 3 5.533E-09 67123 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.69 55.196 11589000 0 0 0 0 0 0 0 0 0 3324500 0 0 0 0 8264800 48490 3789 43478 406693;406694;406695;406696;406697 320894;320895;320896;320897;320898 320895 5 SPSGPSGSLENGTK Unmodified 1316.6208 0.62082322 2370 Q14134 TRIM29 Tripartite motif-containing protein 29 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.632 20.841 2 7.2275E-20 21600 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 140.24 103.55 99469000 0 0 0 8550000 4687500 8570600 8206300 0 4837500 8846100 14416000 8028700 11692000 7646400 13988000 48491 2370 43479 406698;406699;406700;406701;406702;406703;406704;406705;406706;406707;406708;406709 320899;320900;320901;320902;320903;320904;320905;320906;320907;320908;320909;320910 320909 12 SPSGREVEPGEDR Unmodified 1413.6484 0.64843495 2448 Q147X3 NAA30 N-alpha-acetyltransferase 30 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 11.998 12.132 3 7.6962E-07 11407 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 92.65 78.83 91620000 0 0 0 3286500 6231100 6152000 1050100 2115100 1624500 18718000 17669000 32619000 0 0 2154300 48492 2448 43480 406710;406711;406712;406713;406714;406715;406716;406717;406718;406719 320911;320912;320913;320914;320915;320916 320912 5 SPSGSAFGSQENLR Unmodified 1435.6692 0.66917039 3933 Q96N67 DOCK7 Dedicator of cytokinesis protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.857 39.038 2 3.356E-85 43539 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 191.52 124.82 154520000 0 0 0 9734300 9853500 11257000 9005000 9971200 7884000 13778000 18507000 21320000 15003000 11265000 16941000 48493 3933 43481 406720;406721;406722;406723;406724;406725;406726;406727;406728;406729;406730;406731 320917;320918;320919;320920;320921;320922;320923;320924;320925;320926;320927;320928;320929 320917 13 SPSHSSSNRPFTPPTSTGGSK Unmodified 2114.9981 0.9981091 2558 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 2 2 2 1 2 25.328 25.667 3;4 3.7849E-06 25792 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.359 45.071 83606000 0 0 0 0 5578100 0 5247900 0 7072200 16627000 16471000 13093000 0 2659000 16859000 48494 2558 43482 406732;406733;406734;406735;406736;406737;406738;406739;406740;406741;406742;406743 320930;320931;320932;320933 320931 4 SPSIGFMNK Unmodified 979.4797 0.47970205 1881 P62256 UBE2H Ubiquitin-conjugating enzyme E2 H yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 54.087 52.366 2 0.00096563 70576 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 142.64 119.72 234530000 78202000 36300000 10316000 6807700 8290100 12024000 9208200 10525000 5503700 14223000 0 0 18910000 0 24216000 48495 1881 43483 406744;406745;406746;406747;406748;406749;406750;406751;406752;406753;406754;406755;406756 320934;320935;320936;320937;320938;320939;320940;320941;320942;320943;320944;320945;320946;320947;320948 320941 13 SPSIGFMNK Oxidation (M) 995.47462 0.47461667 1881 P62256 UBE2H Ubiquitin-conjugating enzyme E2 H yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 2 2 1 41.796 36.41 2 0.0064489 49631 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.909 82.95 137990000 90895000 40740000 6359900 0 0 0 0 0 0 0 0 0 0 0 0 48496 1881 43483 406757;406758;406759;406760;406761 320949;320950;320951 320950 3049 2 SPSISNMAALSR Oxidation (M) 1248.6132 0.61323542 4345 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 yes yes 0 1 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 36.705 36.797 2 0.0009598 41162 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 67.726 38.639 50941000 0 0 0 6630900 0 0 7353000 4718500 0 13216000 0 0 11576000 7447300 0 48497 4345 43484 406762;406763;406764;406765;406766;406767 320952;320953;320954;320955 320954 5809 2 SPSISNMAALSR Unmodified 1232.6183 0.6183208 4345 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 60.104 60.192 2 0.0045023 68623 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 57.347 35.752 36346000 0 0 0 0 3362400 10621000 0 0 5521700 0 0 0 11995000 0 4845300 48498 4345 43484 406768;406769;406770;406771;406772 320956;320957 320957 2 SPSKPLPEVTDEYK Unmodified 1588.7985 0.79845323 811 P05455 SSB Lupus La protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 46.015 46.195 3 7.306E-08 51279 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 67.579 55.663 178850000 0 0 0 8180700 11376000 0 13928000 0 6089000 9206500 30043000 25387000 23403000 18230000 33004000 48499 811 43485 406773;406774;406775;406776;406777;406778;406779;406780;406781;406782 320958;320959;320960;320961;320962;320963;320964;320965;320966;320967 320965 10 SPSLDNPTPFPNLGPSENPLK Unmodified 2220.1063 0.10626257 2422 Q14653 IRF3 Interferon regulatory factor 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 2 85.479 85.626 2;3 3.1729E-53 98989 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 152.99 138.73 32012000 0 0 0 0 0 0 0 0 0 3266600 5397100 4327300 0 3093500 15927000 48500 2422 43486 406783;406784;406785;406786;406787;406788 320968;320969;320970;320971 320969 4 SPSLDVTVPEAELNLETPEISVGGK Unmodified 2580.317 0.31704321 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS 2.5 0.5 2 2 4 93.513 89.451 2;3 2.4875E-91 110924 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 185.26 134.96 107000000 0 107000000 0 0 0 0 0 0 0 0 0 0 0 0 0 48501 2172 43487 406789;406790;406791;406792 320972;320973;320974;320975 320974 4 SPSLLQSGAK Unmodified 986.53966 0.53965977 4096 Q9BQG0 MYBBP1A Myb-binding protein 1A yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 32.289 32.601 2 0.007587 35629 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 62.104 17.684 13087000 0 0 0 0 0 0 0 0 1604200 0 3671800 0 4173800 3637100 0 48502 4096 43488 406793;406794;406795;406796;406797 320976;320977;320978 320978 3 SPSLNLLQNK Unmodified 1112.619 0.61897272 320 O43353 RIPK2 Receptor-interacting serine/threonine-protein kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 61.055 61.315 2 0.001625 69241 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 104.44 53.805 40774000 0 0 0 0 0 4409600 4430700 0 3124500 6604500 5446600 5834200 0 4025600 6898300 48503 320 43489 406798;406799;406800;406801;406802;406803;406804;406805;406806 320979;320980;320981;320982;320983;320984;320985;320986 320983 8 SPSLSQSQASR Unmodified 1146.5629 0.56291441 4371 Q9H2P0 ADNP Activity-dependent neuroprotector homeobox protein yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.351 15.522 2 0.0003142 15081 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 112.36 90.894 108580000 0 0 0 5818500 3826900 4985200 6317600 5612200 4253700 7549000 15539000 13644000 13264000 11271000 16500000 48504 4371 43490 406807;406808;406809;406810;406811;406812;406813;406814;406815;406816;406817;406818 320987;320988;320989;320990;320991;320992 320988 5 SPSMAVPSPGWVASPK Oxidation (M) 1612.7919 0.79192806 3155 Q86UU0 BCL9L B-cell CLL/lymphoma 9-like protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 65.683 65.908 2 1.9212E-08 75383 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 90.685 83.305 52837000 0 0 0 0 0 3080500 5432600 0 3821000 4489800 4983100 8286500 6850800 5836000 10057000 48505 3155 43491 406819;406820;406821;406822;406823;406824;406825;406826;406827;406828 320993;320994;320995;320996;320997;320998;320999;321000;321001;321002 320999 4773 10 SPSMAVPSPGWVASPK Unmodified 1596.797 0.79701344 3155 Q86UU0 BCL9L B-cell CLL/lymphoma 9-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 76.911 76.09 2 1.6029E-23 88675 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 137.59 120.96 120980000 10816000 0 0 6909800 0 0 8755100 12380000 8736600 11448000 0 17407000 0 12022000 32502000 48506 3155 43491 406829;406830;406831;406832;406833;406834;406835;406836;406837;406838;406839;406840 321003;321004;321005;321006;321007;321008;321009;321010;321011;321012 321010 10 SPSPALHPPQK Unmodified 1157.6193 0.61930707 4421 Q9H6S0 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 2 1 1 1 1 29.998 25.575 3 0.0017016 32459 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 68.893 55.301 81596000 65022000 5887000 10687000 0 0 0 0 0 0 0 0 0 0 0 0 48507 4421 43492 406841;406842;406843 321013;321014;321015 321014 3 SPSPGGPQLSPQLPR Unmodified 1516.7998 0.79979063 4515 Q9HCH0 NCKAP5L Nck-associated protein 5-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 61.926 61.987 2 1.0091E-05 69949 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 68.44 51.809 34856000 0 0 0 2437800 2728000 0 3691100 2814900 0 3927900 4407700 0 4847100 3363800 6637800 48508 4515 43493 406844;406845;406846;406847;406848;406849;406850;406851;406852;406853;406854 321016;321017;321018;321019;321020;321021;321022;321023;321024;321025;321026;321027;321028 321024 13 SPSPGPNHTSNSSNASNATVVPQNSSAR Unmodified 2764.2761 0.27607488 4138 Q9BTA9 WAC WW domain-containing adapter protein with coiled-coil yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 4 1 1 2 28.44 28.826 3 3.0916E-21 30748 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 67.778 64.251 24393000 0 0 0 0 0 3554500 0 0 0 0 13856000 0 0 0 6982600 48509 4138 43494 406855;406856;406857;406858 321029;321030 321030 2 SPSPISNQPSPR Unmodified 1265.6364 0.6364137 3345 Q8N5C8 TAB3 TGF-beta-activated kinase 1 and MAP3K7-binding protein 3 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS 10 0 4 1 1 1 1 27.824 28.042 2 0.022803 29218 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.293 28.141 11232000 0 0 0 0 0 2931000 1883900 0 0 2726700 0 0 0 0 3690200 48510 3345 43495 406859;406860;406861;406862 321031 321031 1 SPSPLVSLQAVK Unmodified 1224.7078 0.70778773 5064 Q9UPZ3 HPS5 Hermansky-Pudlak syndrome 5 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.645 72.714 2 0.00036314 84027 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 81.338 66.668 100590000 0 0 0 5638500 7551200 6499400 8355100 6592300 5034400 10578000 9149500 12759000 9898600 6813000 11717000 48511 5064 43496 406863;406864;406865;406866;406867;406868;406869;406870;406871;406872;406873;406874 321032;321033;321034;321035;321036;321037;321038;321039;321040;321041;321042;321043 321043 12 SPSPPDGSPAATPEIR Unmodified 1577.7686 0.76855009 162 O00499 BIN1 Myc box-dependent-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.347 47.512 2 1.8263E-23 53432 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 138.94 111.61 100390000 0 0 0 4116600 4073900 6478900 6693500 5696500 4141100 11361000 12066000 12529000 9636500 6729300 16867000 48512 162 43497 406875;406876;406877;406878;406879;406880;406881;406882;406883;406884;406885;406886 321044;321045;321046;321047;321048;321049;321050;321051;321052;321053;321054;321055 321045 12 SPSPPDGSPAATPEIRVNHEPEPAGGATPGATLPK Unmodified 3401.6852 0.68516139 162 O00499 BIN1 Myc box-dependent-interacting protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 4 1 1 2 71.451 66.202 4 2.9121E-16 84891 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 57.811 51.53 179060000 19180000 35084000 124790000 0 0 0 0 0 0 0 0 0 0 0 0 48513 162 43498 406887;406888;406889;406890 321056;321057;321058;321059 321056 4 SPSPSFR Unmodified 776.3817 0.38170256 1577 P49585 PCYT1A Choline-phosphate cytidylyltransferase A yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS 10 0 7 1 1 1 2 1 1 20.853 21.219 2 0.027176 21866 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 77.741 77.741 84388000 0 0 0 0 0 0 7396600 9376300 6649300 0 0 32570000 13522000 0 14874000 48514 1577 43499 406891;406892;406893;406894;406895;406896;406897 321060;321061 321060 2 SPSPVQGK Unmodified 798.42357 0.42356738 3898 Q96JP5 ZFP91 E3 ubiquitin-protein ligase ZFP91 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 7.4214 7.5429 2 0.0090656 5657 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 84.097 24.457 30445000 0 0 0 2541400 3689900 3610100 3473600 2417800 3594900 1676200 2583300 0 3005700 1480200 2372500 48515 3898 43500 406898;406899;406900;406901;406902;406903;406904;406905;406906;406907;406908 321062;321063;321064;321065;321066;321067;321068 321062 7 SPSQDFSFIEDTEILDSAMYR Unmodified 2450.0948 0.094771186 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.245 69.319 3 0.025137 79455 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 22.902 12.219 216040000 0 0 0 14650000 14322000 16453000 19722000 13945000 13012000 18044000 18071000 25916000 14300000 16425000 31181000 48516 4285 43501 406909;406910;406911;406912;406913;406914;406915;406916;406917;406918;406919;406920 321069 321069 1 SPSQDNTDSYFR Unmodified 1415.5953 0.59533675 4938 Q9UJF2 RASAL2 Ras GTPase-activating protein nGAP yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 37.534 37.698 2 0.00022953 40619 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 83.862 79.94 21371000 0 0 0 0 1806500 2833500 2831800 0 0 3459300 0 4954300 3213400 2272000 0 48517 4938 43502 406921;406922;406923;406924;406925;406926;406927;406928 321070;321071;321072;321073;321074 321072 5 SPSQESIGAR Unmodified 1030.5043 0.5043369 3588 Q8WXE0 CASKIN2 Caskin-2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 14.668 15.163 2 0.0015301 13994 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 105.52 39.169 18805000 0 0 0 0 0 0 0 0 0 0 9844300 0 0 0 8960300 48518 3588 43503 406929;406930 321075;321076;321077 321075 2 SPSQPGQSGLCGVAAAATGHTPPLAEAPK Unmodified 2756.3552 0.35517682 2866 Q6AWC2 WWC2 Protein WWC2 yes yes 0 0 0 By MS/MS 2 0 1 1 80.387 72.256 3 2.4466E-47 94783 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.01 100.65 15912000 15912000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48519 2866 43504 406931 321078 321078 1 SPSSDSWTCADTSTER Unmodified 1785.7112 0.71117114 3362 Q8N6T3 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.346 37.526 2 5.8973E-28 41555 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 161.1 158.59 54098000 0 0 0 2913100 3898100 3370800 3341700 2858000 2786600 6537800 5275000 5539000 6256700 4531900 6789500 48520 3362 43505 406932;406933;406934;406935;406936;406937;406938;406939;406940;406941;406942;406943 321079;321080;321081;321082;321083;321084;321085;321086;321087;321088;321089 321087 11 SPSSDSWTCADTSTERR Unmodified 1941.8123 0.81228217 3362 Q8N6T3 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.853 32.039 3 5.8609E-19 33925 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 101.39 97.745 183440000 0 0 0 13035000 11921000 10672000 26649000 15563000 11642000 17260000 12540000 12734000 19513000 12854000 19051000 48521 3362 43506 406944;406945;406946;406947;406948;406949;406950;406951;406952;406953;406954;406955 321090;321091;321092;321093;321094;321095;321096;321097;321098;321099;321100;321101;321102;321103;321104 321093 15 SPSSESSPQHPTPPARPR Unmodified 1913.9344 0.93438664 206 O14733 MAP2K7 Dual specificity mitogen-activated protein kinase kinase 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 2 2 1 1 2 1 1 1 1 21.345 21.478 3;4 8.081E-27 22007 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 89.261 80.469 278900000 0 0 0 3376100 16302000 0 31669000 19471000 17284000 51456000 44891000 0 34054000 29837000 30558000 48522 206 43507 406956;406957;406958;406959;406960;406961;406962;406963;406964;406965;406966;406967;406968 321105;321106;321107;321108;321109;321110;321111;321112;321113;321114;321115;321116;321117 321110 10 SPSSLLEDAK Unmodified 1045.5292 0.52915466 1462 P42684 ABL2 Abelson tyrosine-protein kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 46.362 46.076 2 0.0021885 50443 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.744 56.595 195340000 0 30785000 0 8188100 7716500 16221000 11462000 11127000 10487000 14104000 18185000 16383000 17897000 11621000 21163000 48523 1462 43508 406969;406970;406971;406972;406973;406974;406975;406976;406977;406978;406979;406980;406981 321118;321119;321120;321121;321122;321123;321124;321125;321126;321127;321128;321129;321130 321122 12 SPSSLLIANLHLQ Unmodified 1391.7773 0.77726428 2841 Q658Y4 FAM91A1 Protein FAM91A1 yes yes 0 0 0 By MS/MS 10 0 1 1 88.097 88.247 2 0.00074523 102050 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.15 71.544 5289300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5289300 48524 2841 43509 406982 321131 321131 1 SPSSLSANIISSPK Unmodified 1386.7355 0.73545904 3442 Q8NFA0 USP32 Ubiquitin carboxyl-terminal hydrolase 32 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 66.666 59.56 2 0.0081201 79178 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.674 62.524 23874000 6708500 17165000 0 0 0 0 0 0 0 0 0 0 0 0 0 48525 3442 43510 406983;406984 321132;321133 321133 2 SPSSPQQQQQVLNILK Unmodified 1793.9636 0.9635615 3662 Q92793 CREBBP CREB-binding protein yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 22 2 2 2 2 2 1 2 2 2 2 1 2 75.065 75.116 2;3 0.00021742 86629 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 66.059 59.642 209740000 0 0 0 9699500 15413000 14528000 16531000 14914000 10604000 22472000 22947000 25503000 14671000 11994000 30464000 48526 3662 43511 406985;406986;406987;406988;406989;406990;406991;406992;406993;406994;406995;406996;406997;406998;406999;407000;407001;407002;407003;407004;407005;407006 321134;321135;321136;321137;321138;321139;321140;321141;321142 321134 5 SPSSSQPLPQVPAPAQSQTQFHVQPQPQPK Unmodified 3220.6265 0.6265243 2595 Q15942 ZYX Zyxin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.67 1.6 1 23 1 2 2 2 2 2 1 2 2 2 2 2 2 72.647 72.493 3;4 1.6371E-167 89954 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 165.47 160.46 645410000 0 39945000 0 18930000 23090000 36635000 39483000 15887000 22062000 69899000 66551000 82753000 37121000 82554000 110500000 48527 2595 43512 407007;407008;407009;407010;407011;407012;407013;407014;407015;407016;407017;407018;407019;407020;407021;407022;407023;407024;407025;407026;407027;407028;407029;407030 321143;321144;321145;321146;321147;321148;321149;321150;321151;321152;321153;321154;321155;321156;321157;321158;321159;321160;321161;321162;321163;321164;321165 321149 21 SPSSVTGNALWK Unmodified 1245.6354 0.63535107 4739 Q9NYB0 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 54.827 55.152 2 0.0013559 61649 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.557 55.538 27591000 0 0 0 0 0 0 0 0 2537000 4873100 5965900 0 4952900 0 9262000 48528 4739 43513 407031;407032;407033;407034;407035 321166;321167;321168 321167 3 SPSTLLPK Unmodified 841.49092 0.49091866 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 40.41 40.544 2 0.0043522 45133 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 111.01 40.095 424780000 0 0 0 27741000 28958000 31944000 0 25897000 28413000 47892000 63113000 70576000 47520000 52727000 0 48529 1226 43514 407036;407037;407038;407039;407040;407041;407042;407043;407044;407045;407046 321169;321170;321171;321172;321173;321174 321172 6 SPSTTYLHTPTPSEDAAIPSK Unmodified 2199.0695 0.069542713 2234 Q13111 CHAF1A Chromatin assembly factor 1 subunit A yes yes 0 0 0 By MS/MS 10 0 1 1 60.666 61.252 3 0.017287 69240 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 24.095 19.245 28432000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28432000 48530 2234 43515 407047 321175 321175 1 SPSWQRPNQGVPSTGR Unmodified 1752.8656 0.86557879 3865 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 38.848 39.088 3 1.0539E-27 43474 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 132.44 122.3 194220000 0 0 0 0 7150600 13450000 16349000 9245800 6323600 18839000 23517000 23930000 14519000 18148000 42746000 48531 3865 43516 407048;407049;407050;407051;407052;407053;407054;407055;407056;407057;407058 321176;321177;321178;321179;321180;321181;321182;321183;321184;321185;321186;321187;321188;321189;321190;321191 321177 15 SPSWYGIPR Unmodified 1061.5294 0.52942943 1977 P78347 GTF2I General transcription factor II-I yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.44 66.525 2 0.0030173 75921 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 126.52 100.79 748140000 0 0 0 40224000 42335000 56593000 40015000 34625000 34778000 68086000 64077000 96157000 81567000 70161000 119520000 48532 1977 43517 407059;407060;407061;407062;407063;407064;407065;407066;407067;407068;407069;407070 321192;321193;321194;321195;321196;321197;321198;321199;321200;321201;321202;321203 321196 12 SPTAPSVFSPTGNR Unmodified 1416.6997 0.69974224 4381 Q9H3P2 NELFA Negative elongation factor A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 2 1 1 1 1 1 1 54.214 54.291 2 0.00033982 61756 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 77.744 53.995 595170000 0 0 0 3761300 174220000 7406900 371740000 7195400 4237000 7617100 7211100 0 4634600 0 7144800 48533 4381 43518 407071;407072;407073;407074;407075;407076;407077;407078;407079;407080;407081 321204;321205;321206;321207;321208;321209;321210 321205 7 SPTDWALFTYEGNSNDIR Unmodified 2084.9439 0.94394827 4940 Q9UJU6 DBNL Drebrin-like protein yes yes 0 0 0 By MS/MS 10 0 1 1 86.232 86.401 2 3.2955E-37 99873 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 124.86 111.19 4644100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4644100 48534 4940 43519 407082 321211 321211 1 SPTEYHEPVYANPFYRPTTPQR Unmodified 2649.2612 0.26120008 4538 Q9NP74 PALMD Palmdelphin yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 67.28 67.6 4 0.00024872 76839 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.711 38.949 15241000 0 0 0 0 0 0 0 0 0 3776800 0 0 0 0 11464000 48535 4538 43520 407083;407084 321212;321213 321212 2 SPTFAGGLFSISK Unmodified 1310.6871 0.68705229 3410 Q8NCL4 GALNT6 Polypeptide N-acetylgalactosaminyltransferase 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 83.63 83.718 2 0.00096611 96868 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 79.693 64.828 33929000 0 0 0 0 2763000 2512900 0 6098100 0 0 5705900 5315900 0 4308900 7224400 48536 3410 43521 407085;407086;407087;407088;407089;407090;407091;407092;407093 321214;321215;321216;321217;321218;321219;321220;321221 321218 7 SPTGNTPPVIDSVSEK Unmodified 1626.8101 0.81008055 1181 P25054 APC Adenomatous polyposis coli protein yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 53.51 53.185 2 0.019084 60922 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 31.843 14.034 8653900 0 0 0 3372000 2182900 0 0 0 0 0 0 0 0 3099000 0 48537 1181 43522 407094;407095;407096 321222;321223 321223 2 SPTHLTVSSTNTLR Unmodified 1512.7896 0.78961988 2561 Q15652 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 38.767 39.202 3 0.038822 43651 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 28.351 15.074 7962800 0 0 0 0 0 0 0 0 2882500 0 0 0 0 0 5080300 48538 2561 43523 407097;407098 321224 321224 1 SPTLSQVHSPLVTSPSANLK Unmodified 2062.1059 0.10586864 3155 Q86UU0 BCL9L B-cell CLL/lymphoma 9-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70.406 69.407 3 1.5209E-29 89433 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.02 105.31 391260000 65671000 26014000 9005500 13044000 13777000 18486000 22241000 19608000 18821000 24752000 29356000 27917000 20638000 29840000 52088000 48539 3155 43524 407099;407100;407101;407102;407103;407104;407105;407106;407107;407108;407109;407110;407111;407112;407113 321225;321226;321227;321228;321229;321230;321231;321232;321233;321234;321235;321236;321237;321238;321239 321228 13 SPTLYGISHDDLK Unmodified 1444.7198 0.71980898 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 0 By MS/MS 10 0 1 1 57.823 58.014 2 0.0060885 65207 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 47.894 19.881 5770000 0 0 0 0 0 0 0 0 0 0 0 0 0 5770000 0 48540 528 43525 407114 321240 321240 1 SPTMHQVQSPMLGSPSGNLK Unmodified 2095.019 0.019044243 165 O00512 BCL9 B-cell CLL/lymphoma 9 protein yes yes 0 0 0 By MS/MS 2 0 1 1 67.779 59.484 3 4.2949E-08 79730 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.704 73.527 13103000 13103000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48541 165 43526 407115 321241;321242 321242 2 SPTPAPFSPFNPTSLIK Unmodified 1799.9458 0.94578617 4032 Q99607 ELF4 ETS-related transcription factor Elf-4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 91.791 91.898 2 2.0734E-13 106918 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 94.191 87.959 38094000 0 0 0 0 2030000 1899800 2196200 2941300 2461100 5197800 4076700 4020800 2104800 3267700 7897500 48542 4032 43527 407116;407117;407118;407119;407120;407121;407122;407123;407124;407125;407126 321243;321244;321245;321246;321247;321248;321249;321250;321251;321252 321251 10 SPTPPLFSLPEAR Unmodified 1410.7507 0.75071518 3839 Q96FV9 THOC1 THO complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 83.636 83.772 2 4.9551E-05 97170 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 88.441 82.48 168130000 0 0 0 0 0 0 0 0 0 29710000 24594000 31102000 23055000 25889000 33776000 48543 3839 43528 407127;407128;407129;407130;407131;407132 321253;321254;321255;321256 321256 4 SPTPTVNPR Unmodified 967.50869 0.50869399 3598 Q8WY36 BBX HMG box transcription factor BBX yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 21.054 21.25 2 0.0033419 22099 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 90.37 42.712 103830000 0 0 0 8760700 5709600 7718300 9404300 6051200 6779100 10879000 12530000 13670000 8408500 0 13922000 48544 3598 43529 407133;407134;407135;407136;407137;407138;407139;407140;407141;407142;407143 321257;321258;321259;321260;321261;321262;321263;321264;321265;321266 321259 10 SPTSDELVK Unmodified 974.49204 0.49204087 5395 yes yes 0 0 0 By MS/MS 10 0 1 1 19.386 20.006 2 0.045797 19529 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.124 7.2515 + 9631500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9631500 48545 5395 43530 407144 321267 321267 1 SPTSVGAFPSTSAFGQEAGEIVNSGFGK Unmodified 2728.298 0.2980391 395 O60318 MCM3AP Germinal-center associated nuclear protein yes yes 0 0 0 By MS/MS 3 0 1 1 92.962 89.734 3 0.049152 107530 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 15.938 12.669 2213200 0 2213200 0 0 0 0 0 0 0 0 0 0 0 0 0 48546 395 43531 407145 321268 321268 1 SPTTPIDPEK Unmodified 1083.5448 0.54480473 2164 Q08AD1 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 32.297 32.003 2 0.0048197 39807 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.806 72.425 87621000 0 11315000 0 5367800 7728800 0 8636600 8388500 5999300 9148800 9175600 0 7679800 5437800 8743200 48547 2164 43532 407146;407147;407148;407149;407150;407151;407152;407153;407154;407155;407156 321269;321270 321270 2 SPTVPCLQEEAGEPLGGK Unmodified 1867.8986 0.89857798 9 A1L390 PLEKHG3 Pleckstrin homology domain-containing family G member 3 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching 8 3.46 1 3 1 1 1 1 71.5 70.376 2 1.4177E-05 87494 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.25 103.88 37622000 0 26361000 0 0 0 0 0 0 0 3873600 0 0 3592600 0 3794400 48548 9 43533 407157;407158;407159;407160 321271;321272 321272 2 SPTVPSQNPSR Unmodified 1168.5836 0.58364985 2091 Q03164 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS 10 0 5 1 1 1 1 1 20.505 20.447 2 0.030993 20924 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 37.191 26.777 16097000 0 0 0 2682000 4500100 3925100 3229900 1759900 0 0 0 0 0 0 0 48549 2091 43534 407161;407162;407163;407164;407165 321273 321273 1 SPTWFGIPR Unmodified 1059.5502 0.55016488 1977 P78347 GTF2I General transcription factor II-I yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.549 79.608 2 0.0002764 92326 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 148.38 120.86 713530000 0 0 0 42573000 34364000 66318000 28057000 53472000 37711000 70472000 60164000 86802000 59932000 60357000 113310000 48550 1977 43535 407166;407167;407168;407169;407170;407171;407172;407173;407174;407175;407176;407177 321274;321275;321276;321277;321278;321279;321280;321281;321282;321283;321284;321285 321282 12 SPVAVQSTK Unmodified 915.50255 0.50254598 2223 Q13011 ECH1 Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 13.423 13.598 2 0.019187 12081 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.191 25.042 34314000 0 0 0 2888400 2011600 0 2174500 3268600 0 0 5958300 2943900 1293400 5741100 8034100 48551 2223 43536 407178;407179;407180;407181;407182;407183;407184;407185;407186 321286;321287 321286 2 SPVDESGDEVQYGDVPVENGMAPFFEMK 2 Oxidation (M) 3104.3267 0.32669797 3581 Q8WX93 PALLD Palladin yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 82.995 83.047 3 4.5024E-51 95864 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 102.21 100.88 80009000 0 0 0 1827300 0 9255900 0 0 0 14588000 11496000 12656000 0 12889000 17296000 48552 3581 43537 407187;407188;407189;407190;407191;407192;407193 321288;321289;321290;321291;321292;321293;321294;321295 321291 5082;5083 8 SPVDIVTGGISPVRDLDR Unmodified 1895.0112 0.011239973 1638 P50851 LRBA Lipopolysaccharide-responsive and beige-like anchor protein yes yes 0 0 1 By matching By MS/MS By MS/MS By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 81.043 81.075 3 0.0017231 93751 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 49.463 39.363 25895000 0 0 0 0 1379800 9225000 0 0 0 4910500 0 6441800 1575200 2362900 0 48553 1638 43538 407194;407195;407196;407197;407198;407199 321296;321297 321297 1 SPVDYGTSAGVWSQDK Unmodified 1695.774 0.77402939 4251 Q9BYJ9 YTHDF1 YTH domain-containing family protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 61.485 60.537 2 5.0316E-05 75517 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.92 111.71 79393000 0 37572000 0 0 0 0 0 4666600 3002100 6800400 6108400 4363600 5328500 0 11552000 48554 4251 43539 407200;407201;407202;407203;407204;407205;407206;407207;407208 321298;321299;321300;321301;321302;321303;321304;321305;321306 321299 7 SPVESTTEPPAVR Unmodified 1368.6885 0.68850885 1729 P53992 SEC24C Protein transport protein Sec24C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 37.245 37.024 2 2.6792E-09 41085 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 115.78 103.73 140320000 0 14501000 0 7844500 5160200 12105000 7539900 7391600 6681400 11519000 11573000 15771000 11528000 12570000 16132000 48555 1729 43540 407209;407210;407211;407212;407213;407214;407215;407216;407217;407218;407219;407220;407221 321307;321308;321309;321310;321311;321312;321313;321314;321315;321316;321317;321318 321308 12 SPVFNHSLYR Unmodified 1218.6146 0.61455605 3971 Q96RN5 MED15 Mediator of RNA polymerase II transcription subunit 15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 44.565 44.784 3 0.00058 50365 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 100.48 93.588 150790000 0 0 0 12072000 0 11901000 13483000 15282000 0 14661000 0 20918000 23806000 16230000 22440000 48556 3971 43541 407222;407223;407224;407225;407226;407227;407228;407229;407230;407231 321319;321320;321321;321322;321323;321324;321325;321326;321327 321323 9 SPVGLSSDGISSSSSSSRK Unmodified 1823.8861 0.88609904 416 O60583 CCNT2 Cyclin-T2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 35.351 35.523 3 0.00011905 39081 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 51.225 45.321 18589000 0 0 0 0 0 3816800 6046300 0 0 4292400 4433400 0 0 0 0 48557 416 43542 407232;407233;407234;407235;407236;407237 321328;321329;321330;321331 321328 4 SPVGSGAPQAAAPAPAAHVAGNPGGDAAPAATGTAAAASLATAAGSEDAEK Unmodified 4378.1062 0.10616259 1044 P16989 YBX3 Y-box-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 76.585 76.379 4 0 88126 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 201.69 197.88 1838600000 0 18251000 0 38128000 214720000 93288000 87385000 114090000 79716000 221290000 221840000 282850000 171810000 137860000 157370000 48558 1044 43543 407238;407239;407240;407241;407242;407243;407244;407245;407246;407247;407248;407249;407250 321332;321333;321334;321335;321336;321337;321338;321339;321340;321341;321342;321343;321344 321339 13 SPVGSGAPQAAAPAPAAHVAGNPGGDAAPAATGTAAAASLATAAGSEDAEKK Unmodified 4506.2011 0.20112561 1044 P16989 YBX3 Y-box-binding protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 74.264 74.306 4 2.9476E-73 85835 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 71.218 67.066 36535000 0 0 0 0 9197300 0 5333200 0 0 0 0 14096000 0 7908200 0 48559 1044 43544 407251;407252;407253;407254 321345;321346;321347 321346 2 SPVILLR Unmodified 796.51707 0.51707383 4669 Q9NVI1 FANCI Fanconi anemia group I protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 60.516 60.763 2 0.02347 68103 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 92.191 47.58 226370000 0 0 0 0 0 21736000 17406000 25067000 11912000 27139000 22732000 22712000 22532000 28804000 26332000 48560 4669 43545 407255;407256;407257;407258;407259;407260;407261;407262;407263;407264 321348;321349;321350;321351;321352;321353;321354;321355;321356;321357 321351 10 SPVPQESQER Unmodified 1155.552 0.55201537 2576 Q15776 ZKSCAN8 Zinc finger protein with KRAB and SCAN domains 8 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 15.651 15.604 2 0.020509 15312 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 47.198 39.968 9955300 0 0 0 1895000 1888900 2760500 1776400 1634600 0 0 0 0 0 0 0 48561 2576 43546 407265;407266;407267;407268;407269 321358;321359 321359 2 SPVPRSDIPEPEREQK Unmodified 1862.9486 0.94863972 3465 Q8NI27 THOC2 THO complex subunit 2 yes yes 0 0 2 By MS/MS By MS/MS 2 0 4 2 2 41.175 36.033 3;4 0.00096488 45362 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 61.165 51.887 105160000 34466000 0 70693000 0 0 0 0 0 0 0 0 0 0 0 0 48562 3465 43547 407270;407271;407272;407273 321360;321361;321362 321362 1 SPVPSAFSDQSR Unmodified 1276.6048 0.60477922 5066 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 44.987 45.158 2 2.4298E-05 51079 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 116.23 82.971 408460000 0 0 0 15876000 25410000 23261000 26468000 25817000 27574000 31694000 48368000 55157000 37030000 41815000 49988000 48563 5066 43548 407274;407275;407276;407277;407278;407279;407280;407281;407282;407283;407284;407285 321363;321364;321365;321366;321367;321368;321369;321370;321371;321372;321373;321374;321375 321375 12 SPVPSLRPSSTGPSPSGGLSEEPAAK Unmodified 2491.2554 0.255446 4244 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 yes yes 0 0 1 By MS/MS By MS/MS By matching 10 0 3 1 1 1 60.572 60.592 3 3.072E-05 68780 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 36.256 28.359 10459000 0 0 0 2952800 0 0 0 0 2601600 0 0 0 0 0 4904900 48564 4244 43549 407286;407287;407288 321376 321376 0 SPVPVETLK Unmodified 968.55425 0.5542472 2661 Q32MZ4 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 47.723 46.319 2 0.0074102 56762 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 95.741 43.105 1161400000 33855000 791610000 16646000 12018000 12479000 15598000 15547000 16330000 17050000 28457000 0 74119000 26112000 41741000 59834000 48565 2661 43550 407289;407290;407291;407292;407293;407294;407295;407296;407297;407298;407299;407300;407301;407302;407303 321377;321378;321379;321380;321381;321382;321383;321384;321385;321386;321387;321388 321381 12 SPVPVSGQK Unmodified 897.49198 0.4919813 3590 Q8WXG6 MADD MAP kinase-activating death domain protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 16.766 17.016 2 0.045396 16656 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 43.218 21.672 22557000 0 0 0 0 0 2219800 2488500 1726200 997720 1422900 2741200 3239600 3004700 1853100 2863700 48566 3590 43551 407304;407305;407306;407307;407308;407309;407310;407311;407312;407313 321389 321389 1 SPVQALQPLQAAR Unmodified 1377.7728 0.7728476 3323 Q8N3J3 C17orf53 Uncharacterized protein C17orf53 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 65.528 65.661 2 0.033871 75202 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 44.203 29.996 6805500 0 0 0 0 0 0 2681300 0 0 4124100 0 0 0 0 0 48567 3323 43552 407314;407315 321390 321390 1 SPVSPLAAQGIPLPAQLTK Unmodified 1887.0829 0.082948354 3990 Q96SI1 KCTD15 BTB/POZ domain-containing protein KCTD15 yes yes 0 0 0 By MS/MS 10 0 1 1 88.313 88.463 2 0.04307 102368 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.915 45.215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48568 3990 43553 407316 321391 321391 1 SPVSSQQSLK Unmodified 1059.556 0.55603812 3242 Q8IWJ2 GCC2 GRIP and coiled-coil domain-containing protein 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.764 16.943 2 0.019183 16600 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 47.96 14.697 39484000 0 0 0 752350 2699000 3155700 3188100 2649200 1967000 3180400 4694100 4612300 3589000 3509200 5487400 48569 3242 43554 407317;407318;407319;407320;407321;407322;407323;407324;407325;407326;407327;407328 321392;321393;321394;321395;321396;321397;321398;321399 321398 8 SPVSTRPLPSASQK Unmodified 1453.7889 0.7888916 3415 Q8ND56 LSM14A Protein LSM14 homolog A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.001 29.193 3 0.00024813 31606 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 74.853 48.442 343390000 0 0 0 21175000 19010000 20782000 21155000 16235000 21895000 23451000 34339000 47889000 28595000 41081000 47785000 48570 3415 43555 407329;407330;407331;407332;407333;407334;407335;407336;407337;407338;407339;407340 321400;321401;321402;321403;321404;321405;321406;321407;321408;321409;321410;321411;321412;321413 321401 14 SPVTFLSDLR Unmodified 1133.6081 0.60807369 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 82.722 82.745 2 0.0035119 95751 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 76.221 59.682 22359000 0 0 0 743960 1111100 2541500 1843500 2433500 0 3253600 0 3385400 0 0 7046100 48571 19 43556 407341;407342;407343;407344;407345;407346;407347;407348 321414;321415;321416;321417;321418;321419;321420 321418 7 SPVTLLR Unmodified 784.48069 0.48068833 5238 Q9Y5L0 TNPO3 Transportin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.853 49.012 2 0.015614 55635 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 117.6 70.678 242640000 0 0 0 11925000 13106000 22920000 15283000 14379000 14799000 26583000 28049000 27535000 23453000 19664000 24939000 48572 5238 43557 407349;407350;407351;407352;407353;407354;407355;407356;407357;407358;407359;407360 321421;321422;321423;321424;321425;321426;321427;321428;321429;321430;321431;321432;321433 321421 10 SPVTNIAR Unmodified 856.47667 0.47666558 3786 Q96CW1 AP2M1 AP-2 complex subunit mu yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 25.612 25.807 2 0.0042848 27506 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 111.65 71.076 260740000 0 0 0 24024000 17987000 26723000 20013000 0 0 28475000 30876000 43877000 0 25422000 43344000 48573 3786 43558 407361;407362;407363;407364;407365;407366;407367;407368;407369 321434;321435;321436;321437;321438;321439;321440;321441;321442 321440 3 SPVVSEQTAK Unmodified 1044.5451 0.54513908 3436 Q8NEZ4 KMT2C Histone-lysine N-methyltransferase 2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 15.497 15.703 2 0.0044926 14795 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 72.643 49.903 50186000 0 0 0 0 2969900 3406800 3469700 0 0 5107300 4763600 7776300 8699000 7750400 6243000 48574 3436 43559 407370;407371;407372;407373;407374;407375;407376;407377;407378;407379 321443;321444;321445;321446;321447;321448;321449 321445 7 SPVYLTVLK Unmodified 1018.6063 0.60628277 1771 P55786 NPEPPS Puromycin-sensitive aminopeptidase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.865 74.928 2 0.004238 85685 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.476 33.319 158780000 0 0 0 14606000 3674300 4703000 3200900 3973700 3045400 7023700 22733000 16333000 3942600 14588000 60952000 48575 1771 43560 407380;407381;407382;407383;407384;407385;407386;407387;407388;407389;407390;407391 321450;321451;321452;321453;321454;321455;321456;321457;321458;321459;321460;321461 321453 12 SPWSNKYDPPLEDGAMPSAR Oxidation (M) 2233.011 0.010981977 1525 P47756 CAPZB F-actin-capping protein subunit beta yes yes 0 1 1 By MS/MS 10 0 1 1 62.656 62.786 3 0.00010038 71930 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 49.188 33.934 6347600 0 0 0 0 0 0 6347600 0 0 0 0 0 0 0 0 48576 1525 43561 407392 321462 321462 2427 1 SPWSNKYDPPLEDGAMPSAR Unmodified 2217.0161 0.016067355 1525 P47756 CAPZB F-actin-capping protein subunit beta yes yes 0 0 1 By MS/MS 10 0 1 1 71.175 71.61 3 9.1372E-08 81826 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.414 61.13 6386300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6386300 48577 1525 43561 407393 321463 321463 1 SPYDGNETLLSPEK Unmodified 1548.7308 0.7307676 4231 Q9BXR0 QTRT1 Queuine tRNA-ribosyltransferase yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 56.803 57.203 2 1.2353E-07 64271 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.961 62.218 21301000 0 0 0 0 0 0 0 0 0 0 6286600 0 0 6746200 8268500 48578 4231 43562 407394;407395;407396 321464;321465 321464 2 SPYGGGRPGR Unmodified 1002.4995 0.49952629 1511 P46781 RPS9 40S ribosomal protein S9 yes yes 0 0 1 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 8.5042 8.5366 2 0.023605 6810 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 114.5 98.354 102170000 0 0 0 10122000 12612000 0 0 0 0 0 0 43213000 36228000 0 0 48579 1511 43563 407397;407398;407399;407400 321466 321466 1 SPYLPSAHR Unmodified 1026.5247 0.52467841 1152 P23258;Q9NRH3 TUBG1;TUBG2 Tubulin gamma-1 chain;Tubulin gamma-2 chain yes no 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 27.496 27.603 2 0.022062 28616 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 51.736 27.94 43813000 0 0 0 3347400 5399900 0 0 0 8398000 0 12251000 0 7317400 7099700 0 48580 1152 43564 407401;407402;407403;407404;407405;407406 321467 321467 1 SPYQEFTDHLVK Unmodified 1462.7092 0.70924429 1027 P15880 RPS2 40S ribosomal protein S2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.62 3.02 5 24 2 2 1 2 2 2 2 2 2 2 2 2 2 2 2 69.94 69.003 2;3 2.5878E-43 78197 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 199.21 157.34 4635700000 554410000 684840000 537570000 94626000 125920000 225430000 142030000 159800000 163240000 265870000 238120000 387760000 264250000 261310000 530480000 48581 1027 43565 407407;407408;407409;407410;407411;407412;407413;407414;407415;407416;407417;407418;407419;407420;407421;407422;407423;407424;407425;407426;407427;407428;407429;407430;407431;407432;407433;407434;407435 321468;321469;321470;321471;321472;321473;321474;321475;321476;321477;321478;321479;321480;321481;321482;321483;321484;321485;321486;321487;321488;321489;321490;321491;321492;321493;321494;321495;321496;321497;321498;321499;321500;321501;321502;321503 321493 26 SQAAPGSSPCR Unmodified 1116.4982 0.49820566 3339 Q8N556 AFAP1 Actin filament-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 8.2357 8.3676 2 0.0025642 6824 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 67.113 57.332 16031000 0 0 0 0 1164600 867360 1162500 0 1575900 1338900 0 2827300 3264700 1539500 2290200 48582 3339 43566 407436;407437;407438;407439;407440;407441;407442;407443;407444 321504;321505;321506;321507;321508;321509;321510 321509 7 SQAASILTK Unmodified 917.5182 0.51819605 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 2 1 1 1 1 1 1 30.531 30.716 2 0.018165 33835 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 55.064 21.513 262770000 0 0 0 14261000 12415000 24437000 19060000 17554000 17231000 25792000 22525000 36834000 21196000 18200000 33264000 48583 643 43567 407445;407446;407447;407448;407449;407450;407451;407452;407453;407454;407455;407456;407457 321511;321512;321513;321514 321511 4 SQACEPSEPEIEIK Unmodified 1615.74 0.73995207 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 55.685 54.651 2 1.3734E-12 62148 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 117.79 111.13 87211000 6029400 0 0 0 0 0 0 11441000 0 0 14140000 17470000 0 13320000 24810000 48584 1201 43568 407458;407459;407460;407461;407462;407463;407464 321515;321516;321517;321518;321519;321520;321521 321518 7 SQADAVATSATTTTTSTANTTTK Unmodified 2229.0608 0.06082852 5399 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 2 1 1 1 1 1 1 1 1 1 48.079 48.146 3 0.0014664 55055 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 20.426 15.334 + 1608900000 0 0 0 149660000 62995000 157950000 152540000 198780000 168160000 0 0 174730000 183130000 157490000 203480000 48585 5399 43569 407465;407466;407467;407468;407469;407470;407471;407472;407473;407474;407475 321522;321523 321523 2 SQADQFCQR Unmodified 1138.4826 0.4825556 3933 Q96N67 DOCK7 Dedicator of cytokinesis protein 7 yes yes 0 0 0 By MS/MS 10 0 1 1 17.749 18.303 2 0.030341 18129 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 69.825 59.914 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48586 3933 43570 407476 321524 321524 1 SQAEDVATYK Unmodified 1110.5193 0.51931826 3668 Q92830 KAT2A Histone acetyltransferase KAT2A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 22.728 22.968 2 0.0048432 24148 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 71.349 55.687 93843000 0 0 0 0 6011100 7060300 3583200 5700800 5145900 11507000 11859000 20484000 8129400 6956600 7406600 48587 3668 43571 407477;407478;407479;407480;407481;407482;407483;407484;407485;407486;407487 321525;321526;321527;321528;321529;321530;321531;321532;321533;321534;321535 321527 11 SQAEEEIDEIRK Unmodified 1445.6998 0.69980182 2768 Q5T1M5 FKBP15 FK506-binding protein 15 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 39.972 40.237 3 0.0019195 44754 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 52.576 45.864 366720000 0 0 0 0 0 34087000 42428000 35539000 28887000 57369000 46245000 69322000 52839000 0 0 48588 2768 43572 407488;407489;407490;407491;407492;407493;407494;407495;407496 321536;321537;321538;321539;321540;321541 321536 5 SQAEFEK Acetyl (Protein N-term) 879.39741 0.39741221 835 P07108 DBI Acyl-CoA-binding protein yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.11 4.12 2 7 10 4 3 2 1 1 1 1 1 1 1 1 1 1 36.726 36.426 1;2 0.0046365 16605 211201_C21_010_OE480_Thermo_Rev00_#21_059_input_rep1 113.89 57.767 709550000 407510000 67963000 15728000 15348000 14582000 14512000 11127000 13192000 11947000 18216000 49653000 47264000 0 22504000 0 48589 835 43573 407497;407498;407499;407500;407501;407502;407503;407504;407505;407506;407507;407508;407509;407510;407511;407512;407513;407514;407515 321542;321543;321544;321545;321546;321547;321548;321549;321550;321551;321552;321553;321554;321555;321556;321557;321558 321542 17 SQAEIINALLK Unmodified 1198.6921 0.69213767 3100 Q7Z4Q2 HEATR3 HEAT repeat-containing protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 6.56 3.86 3 1 5 1 2 1 1 1 1 1 1 85.533 83.534 2 2.3592E-09 104874 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 143.03 109.64 437090000 12070000 208210000 7093600 0 0 19094000 26977000 812700 0 0 0 0 27549000 0 135280000 48590 3100 43574 407516;407517;407518;407519;407520;407521;407522;407523;407524 321559;321560;321561;321562;321563;321564;321565;321566 321560 8 SQAFIEMETR Oxidation (M) 1226.5601 0.56013721 1473 P43243 MATR3 Matrin-3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.314 37.494 2 0.0010411 40057 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.108 73.651 901370000 0 0 0 49023000 58565000 71471000 75156000 65005000 54111000 69513000 88759000 114040000 106650000 62485000 86593000 48591 1473 43575 407525;407526;407527;407528;407529;407530;407531;407532;407533;407534;407535;407536 321567;321568;321569;321570;321571;321572;321573;321574;321575;321576;321577;321578 321570 2314 12 SQAFIEMETR Unmodified 1210.5652 0.56522259 1473 P43243 MATR3 Matrin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 54.829 54.96 2 0.0036561 61958 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.17 55.474 363800000 0 0 0 16591000 18127000 23475000 26234000 36874000 20462000 28607000 38385000 33644000 36772000 31053000 53581000 48592 1473 43575 407537;407538;407539;407540;407541;407542;407543;407544;407545;407546;407547;407548 321579;321580;321581;321582;321583;321584;321585;321586;321587;321588;321589;321590;321591;321592;321593;321594;321595;321596;321597;321598;321599 321585 21 SQAIHQLK Unmodified 923.51886 0.51886475 2485 Q15046 KARS Lysine--tRNA ligase yes yes 0 0 0 By MS/MS 10 0 1 1 10.839 11.081 2 0.035816 8811 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 52.268 29.12 3464600 0 0 0 0 0 0 0 0 0 0 0 0 0 3464600 0 48593 2485 43576 407549 321600 321600 1 SQAIYLESK Unmodified 1037.5393 0.53932542 4435 Q9H7L9 SUDS3 Sin3 histone deacetylase corepressor complex component SDS3 yes yes 0 0 0 By MS/MS 2 0 1 1 41.062 36.01 2 0.020334 46705 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.378 47.16 55365000 0 55365000 0 0 0 0 0 0 0 0 0 0 0 0 0 48594 4435 43577 407550 321601;321602 321601 2 SQALAVYK Unmodified 878.48617 0.48616764 4345 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.118 32.305 2 0.045385 35410 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 48.561 27.015 126040000 0 0 0 5566400 7257800 7743000 9359000 8540100 7674400 11565000 11340000 17522000 12180000 10654000 16643000 48595 4345 43578 407551;407552;407553;407554;407555;407556;407557;407558;407559;407560;407561;407562 321603;321604 321603 2 SQALELNK Unmodified 901.4869 0.48689592 463 O75150 RNF40 E3 ubiquitin-protein ligase BRE1B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 26.644 26.818 2 0.038354 28587 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 51.059 26.861 226350000 0 0 0 14248000 13607000 0 23018000 23453000 0 31345000 28841000 0 33499000 27499000 30835000 48596 463 43579 407563;407564;407565;407566;407567;407568;407569;407570;407571 321605 321605 1 SQALGNQNSENEILLEGDDDTLSSVDEK Unmodified 3019.3742 0.37417675 1638 P50851 LRBA Lipopolysaccharide-responsive and beige-like anchor protein yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 78.52 78.538 3 8.9445E-11 90729 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 45.332 38.968 27459000 0 0 0 0 2998000 5123900 0 0 0 8438500 0 7160800 0 3738200 0 48597 1638 43580 407572;407573;407574;407575;407576 321606;321607;321608;321609 321606 4 SQALIEELLLYK Unmodified 1418.8021 0.80208205 2810 Q5VT52 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 94.08 94.233 2 0.00030602 109326 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.417 61.044 10737000 0 0 0 0 0 0 0 1220900 0 3033900 2190700 0 0 1129300 3162000 48598 2810 43581 407577;407578;407579;407580;407581 321610;321611;321612;321613;321614 321611 5 SQAPGISLPGVLVGNK Unmodified 1535.8671 0.86714192 4204 Q9BW83 IFT27 Intraflagellar transport protein 27 homolog yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 83.781 83.835 2 0.00092244 96736 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.414 37.741 35188000 0 0 0 1360100 0 0 0 0 0 0 6839600 6798700 2615400 5484900 12089000 48599 4204 43582 407582;407583;407584;407585;407586;407587 321615;321616;321617;321618;321619;321620 321615 6 SQAPGQPGASQWGSR Unmodified 1512.707 0.70695288 3818 Q96EP5 DAZAP1 DAZ-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 33.161 33.403 2 3.2496E-41 35836 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 159.5 149.84 313610000 0 0 0 18717000 0 0 22978000 10881000 15062000 38586000 0 43968000 20717000 48390000 94309000 48600 3818 43583 407588;407589;407590;407591;407592;407593;407594;407595;407596 321621;321622;321623;321624;321625;321626;321627;321628 321622 8 SQAPTLELLQNPK Unmodified 1437.7827 0.78274359 4280 Q9C037 TRIM4 E3 ubiquitin-protein ligase TRIM4 yes yes 0 0 0 By MS/MS 2 0 1 1 79.032 74.297 2 0.0012106 92606 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.616 76.752 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48601 4280 43584 407597 321629 321629 1 SQARGFYPQSHQEPVK Unmodified 1857.9122 0.91219463 900 P0C7T5 ATXN1L Ataxin-1-like yes yes 0 0 1 By MS/MS 2 0 1 1 37.806 31.308 3 0.00013174 43656 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.866 66.446 6960800 6960800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48602 900 43585 407598 321630 321630 1 SQASATAPGLPPPHPTTK Unmodified 1756.9108 0.91079765 197 O14640 DVL1 Segment polarity protein dishevelled homolog DVL-1 yes yes 0 0 0 By MS/MS 2 0 1 1 70.841 62.574 3 0.044075 83362 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 19.39 6.2892 20937000 20937000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48603 197 43586 407599 321631 321631 0 SQAVESANTAHNGK Unmodified 1412.6644 0.66441937 2253 Q13216 ERCC8 DNA excision repair protein ERCC-8 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 7.0297 3.729 3 0.00052937 5797 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.45 69.56 21853000 0 21853000 0 0 0 0 0 0 0 0 0 0 0 0 0 48604 2253 43587 407600;407601 321632 321632 1 SQAVQDLESLGR Unmodified 1301.6575 0.65754307 3283 Q8IYH5 ZZZ3 ZZ-type zinc finger-containing protein 3 yes yes 0 0 0 By MS/MS 10 0 1 1 62.08 62.205 2 0.048871 71059 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 55.401 44.571 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48605 3283 43588 407602 321633 321633 1 SQAVQTNGTQPLSK Acetyl (Protein N-term) 1499.758 0.7579854 4014 Q99496 RNF2 E3 ubiquitin-protein ligase RING2 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 40.67 40.695 2 1.0737E-19 45221 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 134.98 110.89 29702000 0 0 0 4132100 2895100 0 4035400 0 3183100 4956900 5237100 0 5262500 0 0 48606 4014 43589 407603;407604;407605;407606;407607;407608;407609;407610;407611;407612;407613 321634;321635;321636;321637;321638;321639;321640;321641;321642;321643;321644;321645 321639 12 SQCALEEYVR Unmodified 1253.571 0.57103625 1173 P24468;P10589 NR2F2;NR2F1 COUP transcription factor 2;COUP transcription factor 1 yes no 0 0 0 By MS/MS 10 0 1 1 54.807 55.004 2 0.044536 61565 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 53.683 33.353 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48607 1173 43590 407614 321646 321646 1 SQCYYFENPADSEK Unmodified 1736.6988 0.69881554 4257 Q9BZ23 PANK2 Pantothenate kinase 2, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 56.972 56.968 2 5.9807E-19 64419 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 131.17 127.41 70122000 0 0 0 7808100 11334000 15242000 0 0 0 4719300 10644000 20376000 0 0 0 48608 4257 43591 407615;407616;407617;407618;407619;407620 321647;321648;321649;321650;321651;321652 321650 6 SQDAEVGDGTTSVTLLAAEFLK Unmodified 2251.122 0.12197221 4065 Q99832 CCT7 T-complex protein 1 subunit eta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.18 3.75 1 7 4 21 4 6 2 2 2 2 1 2 2 2 2 2 2 2 98.234 96.824 2;3 3.0476E-78 113347 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 185.26 164.2 2015900000 226550000 1555700000 116710000 7963800 4026800 3243100 1867200 4495500 3084100 34550000 18230000 10191000 0 7004500 22240000 48609 4065 43592 407621;407622;407623;407624;407625;407626;407627;407628;407629;407630;407631;407632;407633;407634;407635;407636;407637;407638;407639;407640;407641;407642;407643;407644;407645;407646;407647;407648;407649;407650;407651;407652;407653 321653;321654;321655;321656;321657;321658;321659;321660;321661;321662;321663;321664;321665;321666;321667;321668;321669;321670;321671;321672;321673;321674;321675;321676 321654 18 SQDDAMVDYFFQR Oxidation (M) 1636.6828 0.68277155 2425 Q14671 PUM1 Pumilio homolog 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 75.948 76.06 2 0.00058943 87697 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 68.536 55.959 84243000 0 0 0 0 5532800 6872200 6314900 6249100 6581400 6628400 8354800 14310000 7346500 5560800 10493000 48610 2425 43593 407654;407655;407656;407657;407658;407659;407660;407661;407662;407663;407664 321677;321678;321679;321680;321681;321682;321683;321684;321685;321686;321687 321677 3981 11 SQDDAMVDYFFQR Unmodified 1620.6879 0.68785692 2425 Q14671 PUM1 Pumilio homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 86.562 86.703 2 0.00084292 100336 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 69.451 59.219 18192000 0 0 0 0 0 0 0 3146800 0 3501600 0 0 0 3144200 8399000 48611 2425 43593 407665;407666;407667;407668 321688;321689;321690 321690 3 SQDIPFVSTDIINTLK Unmodified 1789.9462 0.9461801 2708 Q53SF7 COBLL1 Cordon-bleu protein-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 93.931 92.814 2 7.5653E-05 114309 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.6 96.172 97353000 0 83964000 507370 0 0 0 0 0 0 3939800 2902200 0 0 1318900 4720800 48612 2708 43594 407669;407670;407671;407672;407673;407674 321691;321692;321693;321694;321695 321693 5 SQDLSAAPAEQYLQEK Unmodified 1776.853 0.853008 3195 Q86XK2 FBXO11 F-box only protein 11 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By matching 10 0 7 1 1 1 1 1 1 1 66.7 66.85 2 0.012214 76765 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 46.592 16.657 25271000 0 0 0 0 2172600 2378800 0 0 0 2769800 2936500 4281600 0 3971900 6760200 48613 3195 43595 407675;407676;407677;407678;407679;407680;407681 321696;321697 321696 2 SQDNVIK Unmodified 802.41848 0.418482 1754 P55060 CSE1L Exportin-2 yes yes 0 0 0 By MS/MS 2 0 1 1 10.624 7.359 2 0.031185 10434 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.308 33.027 516240000 0 516240000 0 0 0 0 0 0 0 0 0 0 0 0 0 48614 1754 43596 407682 321698 321698 1 SQDPRNPHNDRFVLSK Unmodified 1908.9555 0.95545643 1249 P29401 TKT Transketolase yes yes 0 0 2 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 31.684 32.192 4 0.0073187 33724 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.613 29.577 118320000 0 0 0 0 0 0 0 0 1791200 0 13011000 24009000 0 0 79509000 48615 1249 43597 407683;407684;407685;407686 321699 321699 1 SQDPTPPSAPQEATEGSK Unmodified 1825.833 0.83300084 5051 Q9UPN7 PPP6R1 Serine/threonine-protein phosphatase 6 regulatory subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.38 33.565 2 2.6556E-11 35717 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 102.73 102.73 179040000 0 0 0 9533500 8108600 11761000 10892000 9302600 8052500 15654000 23709000 21196000 21561000 16296000 22976000 48616 5051 43598 407687;407688;407689;407690;407691;407692;407693;407694;407695;407696;407697;407698 321700;321701;321702;321703;321704;321705;321706;321707;321708;321709;321710;321711 321707 12 SQDQDSEVNELSR Unmodified 1505.6594 0.65939357 3167 Q86VM9 ZC3H18 Zinc finger CCCH domain-containing protein 18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.25 31.44 2 2.3355E-08 34224 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 125.22 100.36 91250000 0 0 0 4626500 4426700 5152200 7210900 6207700 3766900 5478800 9385400 12950000 10163000 9872200 12010000 48617 3167 43599 407699;407700;407701;407702;407703;407704;407705;407706;407707;407708;407709;407710 321712;321713;321714;321715;321716;321717;321718;321719;321720;321721;321722;321723 321713 12 SQDQFSDMR Oxidation (M) 1128.4506 0.45058677 3573 Q8WWI1 LMO7 LIM domain only protein 7 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 2 2 2 2 1 1 1 2 2 2 2 1 14.948 15.105 2 0.0054142 14511 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 70.256 51.48 116390000 0 0 0 10087000 8128400 8021200 12134000 4376500 3887800 5016700 17183000 13894000 15287000 11374000 7003200 48618 3573 43600 407711;407712;407713;407714;407715;407716;407717;407718;407719;407720;407721;407722;407723;407724;407725;407726;407727;407728;407729;407730 321724;321725;321726;321727;321728;321729;321730;321731;321732;321733;321734;321735;321736 321735 5067 12 SQDQFSDMR Unmodified 1112.4557 0.45567214 3573 Q8WWI1 LMO7 LIM domain only protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 29.065 29.302 2 0.004238 31594 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 87.476 79.908 172610000 0 0 0 0 9975300 10756000 12121000 11679000 8727300 18057000 18954000 21785000 15366000 14586000 30604000 48619 3573 43600 407731;407732;407733;407734;407735;407736;407737;407738;407739;407740;407741 321737;321738;321739;321740;321741;321742;321743;321744;321745;321746;321747 321738 11 SQDSMSSDTAR Unmodified 1183.4775 0.4775298 1183 P25205 MCM3 DNA replication licensing factor MCM3 yes yes 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.7353 7.8622 2 0.0010376 5371 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.509 71.397 28034000 0 0 0 1092800 1056600 1956200 1837900 1674400 1578900 1553700 5642200 2846900 2047800 1954100 4792900 48620 1183 43601 407742;407743;407744;407745;407746;407747;407748;407749;407750;407751;407752;407753 321748;321749;321750 321748 3 SQDSQHTPHSMTPSNATAPR Unmodified 2148.9607 0.96067774 165 O00512 BCL9 B-cell CLL/lymphoma 9 protein yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 2 2 22.384 22.746 3;4 3.6844E-05 22791 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 51.819 36.398 37487000 0 0 0 0 0 2132200 1611800 0 1746100 0 4649900 6346200 0 8698900 12302000 48621 165 43602 407754;407755;407756;407757;407758;407759;407760;407761;407762 321751;321752;321753 321753 2 SQDSQHTPHSMTPSNATAPRSSTPSHGQTTATEPTPAQK Unmodified 4055.8628 0.8627612 165 O00512 BCL9 B-cell CLL/lymphoma 9 protein yes yes 0 0 1 By MS/MS 2 0 1 1 36.296 29.867 5 1.3093E-43 41772 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.822 77.08 21873000 21873000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48622 165 43603 407763 321754 321754 1 SQDTVLMNLYK Unmodified 1310.654 0.6540376 2654 Q2NL82 TSR1 Pre-rRNA-processing protein TSR1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 2 1 1 1 1 1 1 1 75.598 74.858 2 0.00045477 93481 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.52 87.701 534140000 0 477250000 2744100 7008000 4640700 5436400 5137900 6250100 6386200 9759500 0 0 9524800 0 0 48623 2654 43604 407764;407765;407766;407767;407768;407769;407770;407771;407772;407773;407774 321755;321756;321757;321758;321759;321760;321761 321757 7 SQDTVLMNLYK Oxidation (M) 1326.649 0.64895222 2654 Q2NL82 TSR1 Pre-rRNA-processing protein TSR1 homolog yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.12 3.26 1 1 6 2 1 1 1 1 1 1 67.135 65.93 2 9.1666E-07 84170 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.86 107.53 87156000 0 63590000 0 0 3303400 0 3860600 0 3879400 0 0 0 4675300 4241000 3605600 48624 2654 43604 407775;407776;407777;407778;407779;407780;407781;407782 321762;321763;321764;321765 321763 4324 4 SQDVAVSPQQQQCSK Unmodified 1688.7788 0.7787972 3835 Q96F86 EDC3 Enhancer of mRNA-decapping protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 21.321 21.612 2 5.9667E-26 22361 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 134.08 110.22 74763000 0 0 0 0 4688100 0 8807500 5962700 0 0 11890000 11386000 9194200 10095000 12740000 48625 3835 43605 407783;407784;407785;407786;407787;407788;407789;407790;407791 321766;321767;321768;321769;321770;321771;321772;321773;321774 321766 9 SQDVELWEGEVVK Unmodified 1516.7409 0.74093835 4893 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 yes yes 0 0 0 By MS/MS 2 0 2 2 80.414 72.283 2 0.015845 94857 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.694 42.407 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48626 4893 43606 407792;407793 321775;321776 321775 2 SQEADVQDWEFRK Unmodified 1636.7481 0.74814899 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 1 1 1 1 2 1 2 2 2 1 2 54.064 54.285 2;3 1.642E-09 61440 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 102.52 94.739 204020000 0 0 0 12071000 11995000 13843000 15488000 16803000 15635000 12834000 18318000 28438000 17991000 15067000 25536000 48627 4285 43607 407794;407795;407796;407797;407798;407799;407800;407801;407802;407803;407804;407805;407806;407807;407808;407809;407810 321777;321778;321779;321780;321781;321782;321783;321784;321785;321786;321787;321788;321789;321790;321791;321792;321793;321794;321795 321785 17 SQEAQSLQQQR Unmodified 1301.6324 0.63239096 2156 Q08379 GOLGA2 Golgin subfamily A member 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.792 13.954 2 3.6557E-05 12717 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 141.02 97.772 86561000 0 0 0 4883400 4867400 3664300 5119300 4392600 3496700 11667000 9225400 9984100 10366000 7549200 11346000 48628 2156 43608 407811;407812;407813;407814;407815;407816;407817;407818;407819;407820;407821;407822 321796;321797;321798;321799;321800;321801;321802;321803;321804;321805 321798 10 SQEDDLNRAK Unmodified 1174.5578 0.55782903 4836 Q9UBC2 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 11.372 7.8416 3 0.01638 9941 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 57.348 45.755 116170000 6190000 109980000 0 0 0 0 0 0 0 0 0 0 0 0 0 48629 4836 43609 407823;407824;407825 321806;321807 321807 1 SQEDEISSPVNK Unmodified 1331.6205 0.62048887 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 30.708 30.945 2 1.9361E-05 33218 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 104.95 76.87 71578000 0 0 0 0 4687900 8690300 7256100 0 4678400 8331700 9222000 11789000 8471100 0 8451600 48630 2804 43610 407826;407827;407828;407829;407830;407831;407832;407833;407834;407835 321808;321809;321810;321811;321812;321813;321814;321815;321816;321817 321816 10 SQEDFCGPEHSTEL Unmodified 1634.6519 0.65186535 4769 Q9NZJ0 DTL Denticleless protein homolog yes yes 0 0 0 By MS/MS 2 0 1 1 55.992 50.177 2 0.0015521 64714 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.389 59.866 17626000 0 17626000 0 0 0 0 0 0 0 0 0 0 0 0 0 48631 4769 43611 407836 321818 321818 1 SQEDLNEPIK Unmodified 1171.5721 0.57208211 3094 Q7Z460 CLASP1 CLIP-associating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.121 33.306 2 0.029678 36307 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 43.272 22.325 180510000 0 0 0 11537000 11431000 16225000 14310000 11196000 12686000 18476000 18393000 19905000 14419000 10975000 20961000 48632 3094 43612 407837;407838;407839;407840;407841;407842;407843;407844;407845;407846;407847;407848 321819;321820 321819 2 SQEDMNEPLK Unmodified 1189.5285 0.52850274 456 O75122 CLASP2 CLIP-associating protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.803 28.041 2 0.0029937 30334 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 78.113 61.91 61580000 0 0 0 0 5277600 5759200 3715300 5134500 3495400 6316200 7787600 5849600 5611100 5081300 7551800 48633 456 43613 407849;407850;407851;407852;407853;407854;407855;407856;407857;407858;407859;407860 321821;321822;321823;321824;321825;321826;321827;321828;321829;321830;321831;321832 321821 12 SQEDMNEPLK Oxidation (M) 1205.5234 0.52341736 456 O75122 CLASP2 CLIP-associating protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 15.375 15.557 2 0.0065365 15068 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 56.916 49.244 16542000 0 0 0 0 1443300 0 0 2521200 1586600 0 0 3588700 4132400 3270300 0 48634 456 43613 407861;407862;407863;407864;407865;407866 321833;321834;321835 321835 585 3 SQEDQEQK Unmodified 990.42542 0.42541787 1183 P25205 MCM3 DNA replication licensing factor MCM3 yes yes 0 0 0 By MS/MS 1 0 1 1 106.52 111.78 2 0.011634 92493 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 108.7 71.722 26345000 26345000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48635 1183 43614 407867 321836 321836 1 SQEEAEGILQQYIER Unmodified 1791.8639 0.86390703 5054 Q9UPQ0 LIMCH1 LIM and calponin homology domains-containing protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 82.945 82.981 3 0.00030516 96089 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 50.874 30.224 116760000 0 0 0 1139800 5080000 6317200 3337400 0 5118500 10626000 0 14343000 12267000 14170000 44359000 48636 5054 43615 407868;407869;407870;407871;407872;407873;407874;407875;407876;407877 321837;321838;321839;321840;321841 321837 5 SQEEDQPIIIK Unmodified 1298.6718 0.67179615 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 48.449 48.609 2 0.0071252 53708 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.59 47.745 171570000 0 0 0 14717000 11891000 17107000 6190300 0 0 17170000 21530000 27207000 14532000 14974000 26253000 48637 3443 43616 407878;407879;407880;407881;407882;407883;407884;407885;407886;407887 321842;321843;321844;321845 321844 4 SQEELSPSPPLLNPSTPQSTESQPTTGEPATPK Unmodified 3431.658 0.65800317 3354 Q8N5Y2 MSL3 Male-specific lethal 3 homolog yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 76.414 76.561 3 0.0030078 88713 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 20.452 10.122 6278000 0 0 0 0 0 0 0 0 0 0 3163500 0 3114500 0 0 48638 3354 43617 407888;407889 321846 321846 1 SQEEVPPDSDDNK Unmodified 1458.611 0.61104639 2646 Q27J81 INF2 Inverted formin-2 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 2 2 1 1 2 3 1 1 1 16.742 16.977 2 0.0036332 15023 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 52.79 42.266 30762000 0 0 0 2968700 2543000 0 0 0 1818800 2118600 4833100 9530800 3814000 1834700 1299700 48639 2646 43618 407890;407891;407892;407893;407894;407895;407896;407897;407898;407899;407900;407901;407902;407903 321847;321848;321849;321850;321851;321852;321853;321854 321851 8 SQEGRPVQVIGALIGK Unmodified 1650.9417 0.94170385 3053 Q7L5N1 COPS6 COP9 signalosome complex subunit 6 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 78.978 79.081 3 0.003439 91564 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 42.314 31.044 113900000 0 0 0 0 2204800 9367700 3301000 5898000 7867100 13126000 6469000 9005100 6016200 0 50641000 48640 3053 43619 407904;407905;407906;407907;407908;407909;407910;407911;407912;407913 321855;321856;321857;321858;321859;321860;321861 321859 7 SQEGSQFVK Unmodified 1008.4876 0.4876242 1902 P62495 ETF1 Eukaryotic peptide chain release factor subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 21.53 20.682 2 0.0029321 20570 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 125.31 91.876 2900100000 73355000 1746900000 8571500 47754000 42119000 91594000 65768000 49221000 39735000 124900000 127440000 128340000 81616000 111480000 161290000 48641 1902 43620 407914;407915;407916;407917;407918;407919;407920;407921;407922;407923;407924;407925;407926;407927;407928;407929 321862;321863;321864;321865;321866;321867;321868;321869;321870;321871;321872;321873;321874;321875;321876;321877;321878 321873 15 SQEGVELEK Acetyl (Protein N-term) 1059.5084 0.50841922 4648 Q9NUL5 C19orf66 UPF0515 protein C19orf66 yes yes 1 0 0 By MS/MS 1 0 1 1 100.85 106.11 2 0.021141 85009 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 49.418 23.524 39440000 39440000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48642 4648 43621 407930 321879 321879 1 SQEIDDHQHEMSVLQNAHQQK Unmodified 2501.1353 0.13534764 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 39.48 39.576 4 4.109E-12 44106 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 83.423 75.43 184010000 0 0 0 7422200 7346500 15543000 9449900 21909000 17819000 24726000 0 32211000 27528000 20059000 0 48643 2556 43622 407931;407932;407933;407934;407935;407936;407937;407938;407939;407940 321880;321881;321882;321883;321884;321885;321886;321887;321888;321889 321887 10 SQEIFLNLK Unmodified 1090.6023 0.60226003 4260 Q9BZD4 NUF2 Kinetochore protein Nuf2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 75.016 74.817 2 0.0049392 86150 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 85.212 63.081 72647000 0 3929100 0 2232900 3218900 6733700 5181600 4651800 5506900 7426700 6921100 6601000 4731600 4397100 11115000 48644 4260 43623 407941;407942;407943;407944;407945;407946;407947;407948;407949;407950;407951;407952;407953 321890;321891;321892;321893;321894;321895;321896;321897;321898;321899;321900;321901;321902 321891 13 SQEIIPFPSTK Unmodified 1245.6605 0.66050319 668 O95551 TDP2 Tyrosyl-DNA phosphodiesterase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 7 3.69 1 1 3 2 1 1 1 77.687 73.58 2 2.8609E-05 91713 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.41 113.32 223330000 0 223330000 0 0 0 0 0 0 0 0 0 0 0 0 0 48645 668 43624 407954;407955;407956;407957;407958 321903;321904;321905;321906;321907 321903 5 SQELESVDEGLLQFCANK Unmodified 2065.9626 0.9626348 4370 Q9H2M9 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes yes 0 0 0 By MS/MS 2 0 1 1 88.453 83.611 2 1.1135E-87 103962 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 243.88 218.54 22671000 0 22671000 0 0 0 0 0 0 0 0 0 0 0 0 0 48646 4370 43625 407959 321908 321908 1 SQELEVK Unmodified 831.4338 0.43379771 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By matching 10 0 7 2 1 1 1 1 1 19.742 19.695 2 0.039301 29006 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 69.105 14.494 125000000 0 0 0 41758000 13782000 20869000 17410000 0 11913000 19264000 0 0 0 0 0 48647 2392 43626 407960;407961;407962;407963;407964;407965;407966 321909;321910 321910 2 SQELFDEIR Unmodified 1135.551 0.55095274 775 P04150 NR3C1 Glucocorticoid receptor yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.326 65.413 2 0.0037823 74754 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 88.948 69.854 404480000 0 0 0 18248000 23107000 2458600 30772000 44806000 26901000 36886000 39604000 59618000 38503000 38417000 45158000 48648 775 43627 407967;407968;407969;407970;407971;407972;407973;407974;407975;407976;407977;407978 321911;321912;321913;321914;321915;321916;321917;321918;321919;321920;321921;321922 321911 12 SQELNFVMDVNSSK Unmodified 1596.7454 0.7453718 3250 Q8IWZ3 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 79.727 75.015 2 7.5401E-31 93429 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 188.27 173.85 49580000 0 49580000 0 0 0 0 0 0 0 0 0 0 0 0 0 48649 3250 43628 407979 321923 321923 1 SQELNFVMDVNSSK Oxidation (M) 1612.7403 0.74028643 3250 Q8IWZ3 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 yes yes 0 1 0 By MS/MS 2 0 1 1 69.399 63.53 2 1.659E-16 81008 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.54 82.578 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48650 3250 43628 407980 321924 321924 4862 1 SQEMVHLVNK Unmodified 1183.6019 0.60194245 1031 P16070 CD44 CD44 antigen yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 36.241 34.82 2;3 0.0069975 37311 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 63.534 46.169 117760000 65031000 11811000 21328000 1758200 1494600 0 0 0 0 2238900 2918700 4321600 2964400 3892900 0 48651 1031 43629 407981;407982;407983;407984;407985;407986;407987;407988;407989;407990;407991 321925;321926;321927;321928 321927 3 SQEMVHLVNK Oxidation (M) 1199.5969 0.59685707 1031 P16070 CD44 CD44 antigen yes yes 0 1 0 By MS/MS By MS/MS 2 0 3 1 2 25.604 22.21 2;3 0.0080123 27976 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 76.827 51.09 39308000 0 21992000 17317000 0 0 0 0 0 0 0 0 0 0 0 0 48652 1031 43629 407992;407993;407994 321929;321930 321929 1456 2 SQEPLPDDDEEFELPEFVEPFLK Unmodified 2748.2694 0.26942431 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 99.964 95.519 2;3 7.1394E-38 118977 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 143.02 131.97 47934000 18965000 27650000 1318200 0 0 0 0 0 0 0 0 0 0 0 0 48653 2930 43630 407995;407996;407997;407998;407999 321931;321932;321933;321934 321933 4 SQEQEVLER Unmodified 1116.5411 0.54111633 4976 Q9UKV3 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 25.394 25.609 2 0.049225 27202 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 42.312 23.055 50132000 0 0 0 0 6003500 4948200 0 7808400 3850000 4345000 6264000 0 4196600 5855100 6861100 48654 4976 43631 408000;408001;408002;408003;408004;408005;408006;408007;408008 321935 321935 1 SQEQILEILR Unmodified 1227.6823 0.68230126 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.618 81.679 2 0.00093981 94363 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 111.46 91.465 269300000 0 0 0 5700300 8165500 19876000 15345000 13529000 17176000 26181000 28894000 27917000 18731000 20630000 67155000 48655 965 43632 408009;408010;408011;408012;408013;408014;408015;408016;408017;408018;408019;408020 321936;321937;321938;321939;321940;321941;321942;321943;321944;321945;321946;321947 321938 11 SQEQLAAELAEYTAK Unmodified 1650.8101 0.81008055 1017 P15311 EZR Ezrin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.07 3.82 9 1 17 2 6 2 2 1 1 1 1 1 1 2 2 1 2 2 80.665 79.377 2;3 1.8429E-30 98767 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 153.38 136.75 5515100000 35351000 5104700000 45786000 8467100 2224700 4309900 4520400 4557000 3314700 7800300 44971000 44912000 2853600 39193000 162050000 48656 1017 43633 408021;408022;408023;408024;408025;408026;408027;408028;408029;408030;408031;408032;408033;408034;408035;408036;408037;408038;408039;408040;408041;408042;408043;408044;408045;408046;408047 321948;321949;321950;321951;321952;321953;321954;321955;321956;321957;321958;321959;321960;321961;321962;321963;321964;321965;321966;321967 321949 17 SQEQPLLQPK Unmodified 1166.6295 0.62953741 4281 Q9C0B0 UNK RING finger protein unkempt homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.414 36.594 2 0.0023495 39840 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 84.498 68.354 49200000 0 0 0 2696600 2749400 3048700 4204600 3820400 2576300 3716300 3344300 5727000 3964200 5190900 8161000 48657 4281 43634 408048;408049;408050;408051;408052;408053;408054;408055;408056;408057;408058;408059 321968;321969;321970;321971;321972;321973 321972 6 SQERPTFYRQELNK Acetyl (Protein N-term) 1836.9119 0.91186028 2611 Q16539 MAPK14 Mitogen-activated protein kinase 14 yes yes 1 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 46.62 46.786 3 0.00020997 51624 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.246 33.051 81822000 0 0 0 0 4880400 7692200 0 4209900 3690200 10155000 0 0 9254400 14455000 27485000 48658 2611 43635 408060;408061;408062;408063;408064;408065;408066;408067 321974;321975;321976 321975 3 SQESGYYDR Unmodified 1103.452 0.45196697 1473 P43243 MATR3 Matrin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.939 15.11 2 0.0038923 14370 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 99.802 70.653 384690000 0 0 0 17102000 14422000 18840000 29777000 25815000 20698000 31468000 46747000 40081000 50119000 41310000 48307000 48659 1473 43636 408068;408069;408070;408071;408072;408073;408074;408075;408076;408077;408078;408079 321977;321978;321979;321980;321981;321982;321983;321984;321985;321986;321987;321988;321989;321990 321982 12 SQESGYYDRMDYEDDRLR Oxidation (M) 2312.9604 0.96040297 1473 P43243 MATR3 Matrin-3 yes yes 0 1 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 40.739 40.891 4 0.00067503 45637 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 50.392 49.508 408420000 0 0 0 14981000 13942000 43912000 28898000 26335000 40687000 31922000 0 63897000 58662000 37560000 47624000 48660 1473 43637 408080;408081;408082;408083;408084;408085;408086;408087;408088;408089;408090 321991;321992;321993;321994 321993 2312 4 SQESNVSIQK Unmodified 1118.5568 0.5567664 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 15.984 16.063 2 0.0003426 16172 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 138.98 100.17 307930000 0 0 0 25986000 25637000 28534000 37162000 26751000 24853000 0 0 60951000 78058000 0 0 48661 2556 43638 408091;408092;408093;408094;408095;408096;408097;408098 321995;321996;321997;321998;321999;322000 321995 4 SQESQLPEESK Unmodified 1260.5834 0.58337508 3624 Q92560 BAP1 Ubiquitin carboxyl-terminal hydrolase BAP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 19.374 19.837 2 0.0066094 20179 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 68.49 44.46 19942000 0 0 0 0 0 0 0 0 0 0 0 5162900 4144400 3883500 6751100 48662 3624 43639 408099;408100;408101;408102 322001;322002;322003;322004 322004 4 SQETECTYFSTPLLLGK Unmodified 1972.9452 0.94519382 1423 P40926 MDH2 Malate dehydrogenase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 87.496 86.241 2 2.9215E-58 107600 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 205.87 192.89 791820000 9997700 713140000 3493400 0 2729600 0 2941200 4639200 4346200 5697300 7652300 10789000 5296100 6790300 14306000 48663 1423 43640 408103;408104;408105;408106;408107;408108;408109;408110;408111;408112;408113;408114;408115;408116 322005;322006;322007;322008;322009;322010;322011;322012;322013 322007 9 SQETPATK Unmodified 860.42396 0.42396131 877 P09012 SNRPA U1 small nuclear ribonucleoprotein A yes yes 0 0 0 By MS/MS 1 0 1 1 106.85 112.12 2 0.025965 92882 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 79.713 18.817 63421000 63421000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48664 877 43641 408117 322014 322014 1 SQEVAYTDIK Unmodified 1152.5663 0.56626845 1604 P49840 GSK3A Glycogen synthase kinase-3 alpha yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 38.615 38.744 2 0.0014693 42991 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 90.906 64.967 66513000 0 0 0 2947300 4196900 6457700 5829000 4705700 4698500 6604100 8760900 8987500 6937600 6387900 0 48665 1604 43642 408118;408119;408120;408121;408122;408123;408124;408125;408126;408127;408128 322015;322016;322017;322018;322019;322020 322016 6 SQEVTRDEESTR Unmodified 1435.6539 0.65391426 4070 Q99933 BAG1 BAG family molecular chaperone regulator 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 2 2 2 2 2 1 2 2 2 2 2 7.3467 7.4846 2;3 1.4487E-06 4443 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 113.77 97.675 126830000 0 0 0 5442900 4741900 6217300 7821800 5701600 4572700 6054600 30284000 9504900 10059000 13866000 22563000 48666 4070 43643 408129;408130;408131;408132;408133;408134;408135;408136;408137;408138;408139;408140;408141;408142;408143;408144;408145;408146;408147;408148;408149;408150 322021;322022;322023;322024;322025;322026;322027 322024 7 SQEVVETMCPVPAAATSNVHMVK Unmodified 2484.1811 0.18110055 2839 Q63ZY3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 71.932 72.17 3 7.7883E-05 82498 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.746 31.981 34893000 0 0 0 0 0 0 0 3254500 0 4939000 4751400 6972900 0 4196800 10778000 48667 2839 43644 408151;408152;408153;408154;408155;408156 322028;322029;322030;322031;322032;322033;322034;322035 322030 8 SQEVVETMCPVPAAATSNVHMVK 2 Oxidation (M) 2516.1709 0.17092979 2839 Q63ZY3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 yes yes 0 2 0 By MS/MS By MS/MS 10 0 2 1 1 53.862 54.125 3 3.0048E-06 61522 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 50.029 42.408 5702700 0 0 0 0 0 0 0 0 0 0 0 0 5702700 0 0 48668 2839 43644 408157;408158 322036;322037 322037 4502;4503 2 SQFEAQK Unmodified 836.40283 0.40283194 552 O75874 IDH1 Isocitrate dehydrogenase [NADP] cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 10.937 7.3496 2 0.032506 10203 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.512 52.659 788740000 1596000 787140000 0 0 0 0 0 0 0 0 0 0 0 0 0 48669 552 43645 408159;408160 322038 322038 1 SQFEELCAELLQK Unmodified 1593.7709 0.77085827 3633 Q92598 HSPH1 Heat shock protein 105 kDa yes yes 0 0 0 By MS/MS 10 0 1 1 83.913 84.103 3 0.0004526 97097 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.821 45.62 11084000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11084000 48670 3633 43646 408161 322039 322039 1 SQFFEQGSSDSVVPDLPVPTISAPSR Unmodified 2746.345 0.34498929 3573 Q8WWI1 LMO7 LIM domain only protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 91.999 92.163 3 4.6641E-06 106988 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 38.386 35.663 15295000 0 0 0 0 0 0 0 856270 0 6607700 2892900 0 0 0 4937900 48671 3573 43647 408162;408163;408164;408165 322040;322041 322040 2 SQFGALPADCNIPLPPSK Unmodified 1910.956 0.95603328 4630 Q9NSV4 DIAPH3 Protein diaphanous homolog 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 2 81.39 81.446 2 5.1981E-20 94240 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 102.9 91.265 125550000 0 0 0 3952100 8352700 12358000 8302100 15363000 8013100 15294000 0 13851000 15798000 0 24261000 48672 4630 43648 408166;408167;408168;408169;408170;408171;408172;408173;408174;408175;408176;408177 322042;322043;322044;322045;322046;322047;322048;322049;322050;322051 322042 9 SQFGSASHSEAVQEVRK Unmodified 1845.8969 0.8969385 3289 Q8IYW5 RNF168 E3 ubiquitin-protein ligase RNF168 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 28.267 27.35 3 2.2524E-46 39669 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 109.42 93.282 90565000 49689000 0 2304000 3641200 2861300 3617000 0 0 0 0 10258000 10067000 4791900 3335400 0 48673 3289 43649 408178;408179;408180;408181;408182;408183;408184;408185;408186 322052;322053;322054 322054 3 SQGCSEQVLTVLK Unmodified 1447.7341 0.73407884 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 66.468 66.106 2 6.9843E-08 74739 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 99.215 79.454 168200000 0 16865000 0 7845400 8647600 8518800 8446600 9586600 6458400 12491000 20462000 12586000 10652000 16806000 28836000 48674 1986 43650 408187;408188;408189;408190;408191;408192;408193;408194;408195;408196;408197;408198;408199 322055;322056;322057;322058;322059;322060;322061;322062;322063;322064;322065;322066;322067 322059 13 SQGDEAGGHGEDRPEPLSPK Unmodified 2061.9352 0.9351745 4782 Q9NZT2 OGFR Opioid growth factor receptor yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 18 1 1 2 2 1 2 2 1 2 2 2 23.514 23.781 3;4 3.9209E-07 24150 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.425 41.824 70796000 0 0 0 0 2885700 2776900 4893000 6126200 2132200 6196800 9199200 5438200 7250900 5747300 18150000 48675 4782 43651 408200;408201;408202;408203;408204;408205;408206;408207;408208;408209;408210;408211;408212;408213;408214;408215;408216;408217 322068;322069 322068 2 SQGDMQDLNGNNQSVTR Oxidation (M) 1878.8126 0.81261652 1419 P40763 STAT3 Signal transducer and activator of transcription 3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.112 21.318 2 9.0297E-61 22318 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 168.59 165.06 55758000 0 0 0 2608600 2030100 6084000 4496800 4200900 2383500 5153500 5324300 5795400 5177000 5435500 7068600 48676 1419 43652 408218;408219;408220;408221;408222;408223;408224;408225;408226;408227;408228;408229 322070;322071;322072;322073;322074;322075;322076;322077;322078;322079;322080;322081 322070 2231 12 SQGDMQDLNGNNQSVTR Unmodified 1862.8177 0.8177019 1419 P40763 STAT3 Signal transducer and activator of transcription 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 33.048 33.287 2 3.8793E-38 36125 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 169.62 166.09 77803000 0 0 0 0 2984100 6309400 6377700 8932600 2714900 7689400 7198400 7908500 7333100 6381600 13973000 48677 1419 43652 408230;408231;408232;408233;408234;408235;408236;408237;408238;408239;408240 322082;322083;322084;322085;322086;322087;322088;322089;322090;322091 322090 10 SQGDMQDLNGNNQSVTRQK Oxidation (M) 2134.9662 0.96615705 1419 P40763 STAT3 Signal transducer and activator of transcription 3 yes yes 0 1 1 By MS/MS 2.5 0.5 1 1 2 20.198 16.525 3 1.1923E-06 21879 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.49 83.495 16390000 0 16390000 0 0 0 0 0 0 0 0 0 0 0 0 0 48678 1419 43653 408241;408242 322092;322093 322093 2231 2 SQGDMQDLNGNNQSVTRQK Unmodified 2118.9712 0.97124243 1419 P40763 STAT3 Signal transducer and activator of transcription 3 yes yes 0 0 1 By MS/MS 2 0 1 1 31.174 26.722 3 1.2408E-23 35010 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.3 109.49 15566000 0 15566000 0 0 0 0 0 0 0 0 0 0 0 0 0 48679 1419 43653 408243 322094 322094 1 SQGDNNVSLVEEFRK Unmodified 1720.838 0.83802663 5285 Q9Y6I4 USP3 Ubiquitin carboxyl-terminal hydrolase 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.529 61.629 3 0.00028661 70102 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.918 50.996 156180000 0 0 0 6295300 8004300 12209000 8341400 11464000 6901600 13089000 18381000 18697000 12844000 19229000 20722000 48680 5285 43654 408244;408245;408246;408247;408248;408249;408250;408251;408252;408253;408254;408255 322095;322096;322097;322098;322099;322100;322101;322102;322103;322104;322105 322103 10 SQGFPDTYR Unmodified 1069.4829 0.48287317 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.888 39.068 2 0.016766 43167 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 56.258 47.918 186530000 0 0 0 8658800 11878000 12147000 13564000 7789000 8112400 18256000 28646000 19225000 16791000 12045000 29414000 48681 1201 43655 408256;408257;408258;408259;408260;408261;408262;408263;408264;408265;408266;408267 322106;322107;322108;322109 322109 4 SQGGEEEGPLSDK Unmodified 1331.5841 0.58410336 4313 Q9H063 MAF1 Repressor of RNA polymerase III transcription MAF1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 22.811 22.68 2 0.00061534 23435 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 75.819 60.882 58619000 0 7189000 0 0 1763500 4616800 2804500 3193100 1977200 5097500 5921500 7796000 5228900 5275900 7755300 48682 4313 43656 408268;408269;408270;408271;408272;408273;408274;408275;408276;408277;408278;408279 322110;322111;322112;322113;322114;322115;322116;322117;322118 322118 9 SQGGVQPIPSQGGK Unmodified 1338.6892 0.68917755 4762 Q9NZB2 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.696 26.897 2 0.00055608 28764 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 87.667 72.005 102050000 0 0 0 7924200 4260500 9453600 5352900 8182100 5123700 8511000 8666700 11831000 13663000 8752000 10326000 48683 4762 43657 408280;408281;408282;408283;408284;408285;408286;408287;408288;408289;408290;408291 322119;322120;322121;322122;322123;322124;322125;322126 322126 7 SQGKPIELTPLPLLK Unmodified 1632.9814 0.98144339 2610 Q16537 PPP2R5E Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 83.598 83.663 3 0.013473 96437 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.995 28.104 37542000 0 0 0 0 2747400 2790700 0 0 0 7563000 6371000 0 4611600 5392000 8066600 48684 2610 43658 408292;408293;408294;408295;408296;408297;408298 322127;322128 322128 2 SQGLFDQFRR Unmodified 1252.6313 0.63126874 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.014 60.122 3 0.036831 67644 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 24.853 3.1822 76943000 0 0 0 4241600 2119400 5734400 4786100 6018000 7118500 6242800 5666500 8303500 8704400 5446800 12561000 48685 3443 43659 408299;408300;408301;408302;408303;408304;408305;408306;408307;408308;408309;408310 322129;322130;322131 322129 3 SQGLSQLYHNQSQGLLSQLQGQSK Unmodified 2628.3256 0.32559125 1974 P78344 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 78.802 78.979 3 5.3912E-94 90950 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 159.58 155.92 68251000 0 0 0 0 0 0 0 4482600 4093400 7407200 0 0 0 0 52268000 48686 1974 43660 408311;408312;408313;408314 322132;322133;322134 322133 3 SQGMALSLGDK Oxidation (M) 1121.5387 0.53867349 1720 P53618 COPB1 Coatomer subunit beta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 7.89 3.41 3 2 13 2 3 1 2 1 1 1 1 1 2 1 2 34.477 33.057 2 0.0034787 36911 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 59.426 35.997 483070000 9121300 382270000 0 0 5343700 6216900 0 3249800 0 11999000 5807400 15762000 15665000 5551100 22088000 48687 1720 43661 408315;408316;408317;408318;408319;408320;408321;408322;408323;408324;408325;408326;408327;408328;408329;408330;408331;408332 322135;322136;322137;322138;322139;322140;322141;322142;322143;322144 322143 2793 10 SQGMALSLGDK Unmodified 1105.5438 0.54375887 1720 P53618 COPB1 Coatomer subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.17 3.85 2 1 3 1 2 1 1 1 53.582 49.982 2 0.0010181 64735 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.538 56.143 693340000 29584000 596820000 0 0 0 0 0 14538000 0 0 0 0 0 0 52400000 48688 1720 43661 408333;408334;408335;408336;408337;408338 322145;322146;322147;322148;322149;322150;322151 322146 7 SQGMASLNLPAVSWK Oxidation (M) 1603.8028 0.8028271 1340 P35221 CTNNA1 Catenin alpha-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 81.448 80.191 2 6.7709E-23 93191 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 118.37 108.68 389570000 15510000 237600000 0 3506200 6852900 15261000 7168500 7698000 8156000 16288000 14036000 13635000 8218800 10184000 25452000 48689 1340 43662 408339;408340;408341;408342;408343;408344;408345;408346;408347;408348;408349;408350;408351;408352;408353;408354 322152;322153;322154;322155;322156;322157;322158;322159;322160;322161;322162;322163;322164;322165;322166 322152 2031 15 SQGMASLNLPAVSWK Unmodified 1587.8079 0.80791248 1340 P35221 CTNNA1 Catenin alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 88.462 84.18 2 6.9383E-39 106757 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 139.78 121.72 65027000 13997000 36798000 0 0 0 0 0 0 0 0 0 0 0 0 14232000 48690 1340 43662 408355;408356;408357 322167;322168;322169 322169 3 SQGNELFRSGQFAEAAGK Unmodified 1895.9126 0.91258856 2137 Q07617 SPAG1 Sperm-associated antigen 1 yes yes 0 0 1 By MS/MS 2 0 1 1 69.069 60.774 3 7.6265E-05 81255 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.096 51.566 25618000 25618000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48691 2137 43663 408358 322170;322171 322171 2 SQGPSLDLSALK Unmodified 1214.6507 0.65066678 664 O95466 FMNL1 Formin-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 74.39 74.02 2 0.0043879 92220 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.358 49.587 379190000 0 156570000 0 0 16217000 28127000 18372000 17716000 18876000 30303000 33178000 28640000 0 0 31193000 48692 664 43664 408359;408360;408361;408362;408363;408364;408365;408366;408367;408368 322172;322173 322173 2 SQGQDVTSSVYFMK Oxidation (M) 1591.7188 0.7188227 1020 P15374 UCHL3 Ubiquitin carboxyl-terminal hydrolase isozyme L3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 6 4 2 2 1 1 1 1 54.117 51.112 2 3.8933E-09 64981 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.09 92.418 146920000 0 137300000 1250800 0 0 0 0 0 0 0 0 0 0 0 8370500 48693 1020 43665 408369;408370;408371;408372 322174;322175;322176;322177 322174 1418 4 SQGQDVTSSVYFMK Unmodified 1575.7239 0.72390808 1020 P15374 UCHL3 Ubiquitin carboxyl-terminal hydrolase isozyme L3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.55 1 1 4 2 1 1 1 1 67.978 66.506 2 1.291E-16 76443 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 122.42 107.16 390990000 0 354150000 0 0 0 0 0 0 0 0 6385700 7100400 0 5785900 17566000 48694 1020 43665 408373;408374;408375;408376;408377;408378 322178;322179;322180;322181;322182;322183;322184 322182 6 SQGSQAELHPLPQLK Unmodified 1631.8631 0.86311917 2504 Q15172 PPP2R5A Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 55.617 55.707 3 0.0007897 62931 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 51.03 40.386 79193000 0 0 0 8541200 0 12755000 5715200 5166100 6199900 8652500 13659000 0 8376100 10129000 0 48695 2504 43666 408379;408380;408381;408382;408383;408384;408385;408386;408387 322185;322186;322187;322188;322189 322186 5 SQGTLIIHSEDPLTVK Unmodified 1736.9309 0.93086439 2708 Q53SF7 COBLL1 Cordon-bleu protein-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 68.628 68.703 3 0.0039409 78767 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 37.438 31.382 128910000 0 0 0 5592800 6135900 14225000 7805300 8633700 7608400 16283000 14329000 20060000 0 9154500 19086000 48696 2708 43667 408388;408389;408390;408391;408392;408393;408394;408395;408396;408397;408398 322190;322191;322192;322193;322194;322195 322191 6 SQGVFQCGPASVIGVR Unmodified 1660.8355 0.83552421 2150 Q08188 TGM3 Protein-glutamine gamma-glutamyltransferase E;Protein-glutamine gamma-glutamyltransferase E 50 kDa catalytic chain;Protein-glutamine gamma-glutamyltransferase E 27 kDa non-catalytic chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.831 77.888 2 8.6998E-50 89827 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 166.45 140.4 244760000 0 0 0 67981000 14122000 14633000 10222000 25831000 8635800 20933000 17360000 24078000 13439000 12212000 15318000 48697 2150 43668 408399;408400;408401;408402;408403;408404;408405;408406;408407;408408;408409;408410 322196;322197;322198;322199;322200;322201;322202;322203;322204;322205;322206;322207;322208;322209;322210;322211;322212;322213 322207 18 SQGYDWSEPFSPGEDEFK Unmodified 2103.8698 0.86978027 3136 Q86TI2 DPP9 Dipeptidyl peptidase 9 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 85.038 81.033 2 1.0637E-70 100641 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 169.54 165.83 168440000 0 168440000 0 0 0 0 0 0 0 0 0 0 0 0 0 48698 3136 43669 408411;408412 322214;322215 322214 2 SQGYRDGPGNPLR Unmodified 1415.6906 0.69057454 3702 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.564 29.756 3 0.01241 31677 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 38.3 26.379 71717000 0 0 0 4643800 2630700 5107300 4741100 4565000 3676700 5135100 7312500 7404800 7171100 6641200 12687000 48699 3702 43670 408413;408414;408415;408416;408417;408418;408419;408420;408421;408422;408423;408424 322216;322217;322218 322218 3 SQHCKPEEGLEAR Unmodified 1539.71 0.70998935 1478 P43360;P43357;P43356 MAGEA6;MAGEA3;MAGEA2 Melanoma-associated antigen 6;Melanoma-associated antigen 3;Melanoma-associated antigen 2 yes no 0 0 1 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 12.536 12.752 3 0.0018478 10963 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.159 50.43 38204000 0 0 0 0 0 4072000 2548300 2334300 0 7257400 3398600 5529900 4454300 3485100 5123800 48700 1478 43671 408425;408426;408427;408428;408429;408430;408431;408432;408433 322219;322220;322221 322219 3 SQHSGNAQVTQTK Unmodified 1384.6695 0.66950474 3608 Q92499 DDX1 ATP-dependent RNA helicase DDX1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 5.7078 5.0309 3 5.9113E-36 4834 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 158.59 148.54 2598700000 1453800000 943620000 69929000 15210000 10357000 14450000 14106000 21392000 14186000 4432800 8577400 7190200 5380600 4756600 11254000 48701 3608 43672 408434;408435;408436;408437;408438;408439;408440;408441;408442;408443;408444;408445;408446;408447;408448;408449 322222;322223;322224;322225;322226;322227;322228;322229;322230;322231;322232;322233;322234 322224 12 SQICDNAALYAQK Unmodified 1480.698 0.69802768 1754 P55060 CSE1L Exportin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 46.192 44.828 2 1.5616E-29 56366 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 195.4 174.03 1246100000 18062000 701470000 0 15648000 13806000 85152000 26144000 13681000 11870000 53587000 48948000 51634000 35944000 52032000 118100000 48702 1754 43673 408450;408451;408452;408453;408454;408455;408456;408457;408458;408459;408460;408461;408462;408463;408464;408465 322235;322236;322237;322238;322239;322240;322241;322242;322243;322244;322245;322246;322247;322248;322249;322250;322251;322252;322253;322254 322241 19 SQIFSTASDNQPTVTIK Unmodified 1835.9265 0.92650729 932 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.51 3.08 6 1 30 5 2 3 3 2 2 2 3 2 2 2 3 3 3 68.39 67.826 2;3 1.1832E-143 78564 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 255.85 231.39 10852000000 0 6564000000 53999000 278510000 228830000 279790000 289140000 273480000 234380000 377130000 449100000 513400000 302700000 323140000 684560000 48703 932 43674 408466;408467;408468;408469;408470;408471;408472;408473;408474;408475;408476;408477;408478;408479;408480;408481;408482;408483;408484;408485;408486;408487;408488;408489;408490;408491;408492;408493;408494;408495;408496;408497;408498;408499;408500;408501;408502 322255;322256;322257;322258;322259;322260;322261;322262;322263;322264;322265;322266;322267;322268;322269;322270;322271;322272;322273;322274;322275;322276;322277;322278;322279;322280;322281;322282;322283;322284;322285;322286;322287;322288;322289;322290;322291;322292;322293;322294;322295;322296;322297;322298;322299 322293 35 SQIHDIVLVGGSTR Unmodified 1480.7998 0.79979063 934 P11142 HSPA8 Heat shock cognate 71 kDa protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.08 3.39 8 1 28 4 2 3 3 3 2 2 3 2 2 2 2 2 2 3 58.25 57.544 2;3 1.08E-26 63889 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 155.42 122.19 4881600000 74781000 5402400 17559000 196030000 143990000 337180000 224810000 212140000 174930000 291430000 496180000 581390000 401420000 498840000 1225500000 48704 934 43675 408503;408504;408505;408506;408507;408508;408509;408510;408511;408512;408513;408514;408515;408516;408517;408518;408519;408520;408521;408522;408523;408524;408525;408526;408527;408528;408529;408530;408531;408532;408533;408534;408535;408536;408537;408538;408539 322300;322301;322302;322303;322304;322305;322306;322307;322308;322309;322310;322311;322312;322313;322314;322315;322316;322317;322318;322319;322320;322321;322322;322323;322324;322325;322326;322327;322328;322329;322330;322331;322332;322333;322334;322335;322336;322337;322338;322339;322340;322341;322342;322343;322344;322345 322313 44 SQIHDIVLVGGSTRIPK Unmodified 1819.0316 0.031581485 934 P11142 HSPA8 Heat shock cognate 71 kDa protein yes yes 0 0 1 By MS/MS 2 0 1 1 76.18 68.05 3 0.00048167 89605 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.475 56.068 44697000 44697000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48705 934 43676 408540 322346 322346 1 SQIHEPENLMPTQIIPGK Unmodified 2031.0459 0.04591092 5193 Q9Y4C1 KDM3A Lysine-specific demethylase 3A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 77.13 77.314 3 0.0008977 88865 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.726 36.812 35451000 0 0 0 0 0 0 0 7782300 0 7455500 0 0 0 0 20213000 48706 5193 43677 408541;408542;408543;408544 322347;322348;322349;322350;322351 322348 5 SQIHEPENLMPTQIIPGK Oxidation (M) 2047.0408 0.040825542 5193 Q9Y4C1 KDM3A Lysine-specific demethylase 3A yes yes 0 1 0 By MS/MS 3 0 1 1 73.296 69.348 3 0.0023663 83963 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 40.349 26.04 2862500 0 2862500 0 0 0 0 0 0 0 0 0 0 0 0 0 48707 5193 43677 408545 322352 322352 6590 1 SQILSGTLPQDELK Unmodified 1527.8144 0.81443765 2386 Q14185 DOCK1 Dedicator of cytokinesis protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 71.659 71.668 2 0.0041379 82283 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 57.019 22.013 44584000 0 0 0 0 7861700 9802800 10590000 8874900 7454800 0 0 0 0 0 0 48708 2386 43678 408546;408547;408548;408549;408550 322353;322354;322355;322356;322357 322356 5 SQIPLSK Unmodified 771.44905 0.44905385 974 P13010 XRCC5 X-ray repair cross-complementing protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.257 27.454 2 0.031973 28192 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.324 31.432 939010000 0 0 0 51196000 48371000 73906000 746880 52609000 45268000 83804000 111850000 122000000 94495000 98660000 156100000 48709 974 43679 408551;408552;408553;408554;408555;408556;408557;408558;408559;408560;408561;408562 322358 322358 1 SQIQEYVDYNGGAGVQHIALK Unmodified 2289.139 0.13895968 1323 P32754 HPD 4-hydroxyphenylpyruvate dioxygenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.29 0.452 5 2 2 3 2 78.472 74.151 2;3 0 92814 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 347.6 327.86 3116600000 168170000 2828400000 120040000 0 0 0 0 0 0 0 0 0 0 0 0 48710 1323 43680 408563;408564;408565;408566;408567;408568;408569 322359;322360;322361;322362;322363;322364;322365 322359 6 SQISADSGVSLTSSSQR Unmodified 1708.8228 0.8227705 3590 Q8WXG6 MADD MAP kinase-activating death domain protein yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 45.335 45.742 2 3.5654E-08 50423 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 96.306 80.416 22476000 0 0 0 0 0 4462200 0 0 3080400 0 0 6281500 3255800 0 5396000 48711 3590 43681 408570;408571;408572;408573;408574;408575 322366;322367 322367 2 SQISSVNSDVEALRR Unmodified 1659.854 0.85401105 2990 Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 54.557 54.553 3 0.0050383 62028 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 35.037 28.456 25109000 0 0 0 4300500 0 2969500 3576500 5025900 3408900 5827700 0 0 0 0 0 48712 2990 43682 408576;408577;408578;408579;408580;408581 322368;322369;322370;322371;322372 322372 5 SQKEEDEQEDLTK Unmodified 1577.7057 0.70567506 3687 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 13.592 13.702 2;3 6.5014E-07 12317 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 79.886 58.111 58972000 0 0 0 9490500 0 0 0 0 12790000 18462000 0 0 0 18229000 0 48713 3687 43683 408582;408583;408584;408585;408586 322373;322374;322375;322376 322374 4 SQKPEAGGCGAPAAR Unmodified 1455.6889 0.68885998 398 O60343 TBC1D4 TBC1 domain family member 4 yes yes 0 0 1 By MS/MS 10 0 1 1 7.7541 8.113 3 0.022778 6105 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 30.226 27.439 13505000 0 0 0 0 0 0 0 0 0 0 13505000 0 0 0 0 48714 398 43684 408587 322377 322377 1 SQLARIQTDSVVATLK Unmodified 1728.9734 0.9733979 865 P08397 HMBS Porphobilinogen deaminase yes yes 0 0 1 By MS/MS 2 0 1 1 76.859 68.728 3 0.00076653 90483 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.384 34.329 46905000 46905000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48715 865 43685 408588 322378 322378 1 SQLDAVNLEK Unmodified 1115.5823 0.58225287 4331 Q9H0K1 SIK2 Serine/threonine-protein kinase SIK2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 47.324 47.351 2 0.01243 53321 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 52.49 25.186 19421000 0 0 0 0 3740600 0 4868000 0 0 0 0 0 6466300 4345700 0 48716 4331 43686 408589;408590;408591;408592 322379;322380 322379 2 SQLDIIIHSLK Unmodified 1265.7343 0.73433683 974 P13010 XRCC5 X-ray repair cross-complementing protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.94 3.84 6 1 11 2 3 2 1 1 1 1 1 1 1 1 1 1 1 84.084 82.248 2;3 0.00099485 104814 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.081 67.491 475840000 215920000 108530000 30184000 1234000 0 7830700 3072200 4426200 5540000 10331000 9091400 7352800 3633900 8948400 59750000 48717 974 43687 408593;408594;408595;408596;408597;408598;408599;408600;408601;408602;408603;408604;408605;408606;408607;408608;408609;408610 322381;322382;322383;322384;322385;322386;322387;322388;322389;322390;322391;322392;322393 322386 11 SQLDINNK Unmodified 930.47706 0.47705951 154 O00429 DNM1L Dynamin-1-like protein yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 20.367 20.589 2 0.0055506 20870 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 106.42 63.501 342370000 0 0 0 23136000 20261000 42319000 0 21225000 17507000 33680000 36369000 45437000 26203000 30716000 45515000 48718 154 43688 408611;408612;408613;408614;408615;408616;408617;408618;408619;408620;408621 322394;322395;322396;322397;322398;322399;322400 322398 6 SQLDLFDDVGTFASGPPK Unmodified 1892.9156 0.91560825 3358 Q8N6H7 ARFGAP2 ADP-ribosylation factor GTPase-activating protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 2 2 2 2 2 2 2 1 2 2 90.325 90.448 2;3 1.038E-29 104955 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 114.74 104.95 81014000 0 0 0 0 2294600 5131700 3153900 4221800 3405000 14313000 9996800 7462800 2263400 5227000 23543000 48719 3358 43689 408622;408623;408624;408625;408626;408627;408628;408629;408630;408631;408632;408633;408634;408635;408636;408637;408638;408639;408640;408641 322401;322402;322403;322404;322405;322406;322407;322408;322409;322410;322411;322412 322403 12 SQLEEQAAR Unmodified 1030.5043 0.5043369 99 Q6KB66;CON__Q6KB66-1 KRT80 Keratin, type II cytoskeletal 80 yes no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 13.943 14.081 2 0.0086707 13433 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 68.95 21.375 + 252670000 0 0 0 60751000 14792000 12640000 14943000 29377000 9274200 23813000 22950000 26292000 29420000 8413700 0 48720 99 43690 408642;408643;408644;408645;408646;408647;408648;408649;408650;408651;408652 322413;322414 322413 2 SQLELQQLK Unmodified 1085.6081 0.60807369 1788 P56945 BCAR1 Breast cancer anti-estrogen resistance protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 53.899 53.53 2 0.0052017 60563 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 80.455 41.202 43246000 0 0 0 14277000 11063000 0 17906000 0 0 0 0 0 0 0 0 48721 1788 43691 408653;408654;408655;408656;408657;408658 322415;322416;322417;322418;322419;322420 322416 6 SQLFVEGLVQGNVTSTESMDFLK Oxidation (M) 2544.2418 0.24176977 375 O43847 NRD1 Nardilysin yes yes 0 1 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 94.361 89.651 3 0.00042573 113120 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.745 40.767 22312000 19222000 0 3090100 0 0 0 0 0 0 0 0 0 0 0 0 48722 375 43692 408659;408660;408661 322421;322422;322423 322422 475 3 SQLFVEGLVQGNVTSTESMDFLK Unmodified 2528.2469 0.24685515 375 O43847 NRD1 Nardilysin yes yes 0 0 0 By MS/MS 3 0 2 2 97.004 93.497 2;3 1.1984E-10 96794 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 95.015 75.691 10633000 10633000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48723 375 43692 408662;408663 322424;322425 322425 2 SQLGAHHTTPVGDGAAGTR Unmodified 1831.8925 0.89252182 2719 Q5BJD5 TMEM41B Transmembrane protein 41B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 20.975 21.013 3 6.0375E-06 21762 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 61.648 51.549 17859000 0 0 0 0 2191800 3543300 3105600 4217700 0 0 0 0 0 4800500 0 48724 2719 43693 408664;408665;408666;408667;408668 322426;322427;322428;322429;322430;322431 322431 6 SQLLGSAHEVQR Unmodified 1323.6895 0.6895119 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.421 30.61 3 0.00016818 31712 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.204 65.538 386870000 0 0 0 15067000 13714000 31909000 18642000 14699000 8897000 40106000 46250000 58106000 25030000 27008000 87438000 48725 2344 43694 408669;408670;408671;408672;408673;408674;408675;408676;408677;408678;408679;408680 322432;322433;322434;322435;322436;322437;322438;322439;322440;322441;322442;322443 322435 12 SQLLSYIDR Unmodified 1093.5768 0.57677356 1334 P33993 MCM7 DNA replication licensing factor MCM7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 70.726 70.528 2 0.0052698 81996 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 78.334 48.861 33496000 0 0 0 5429600 5660000 0 0 0 0 0 0 0 10681000 11726000 0 48726 1334 43695 408681;408682;408683;408684 322444;322445;322446 322446 3 SQLNDISSFK Unmodified 1137.5666 0.5666028 4145 Q9BTE7 DCUN1D5 DCN1-like protein 5 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching 10 0 4 1 1 1 1 52.909 53.178 2 0.013393 60640 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 59.908 45.145 76867000 0 0 0 0 0 0 16756000 14776000 0 17964000 0 0 0 0 27371000 48727 4145 43696 408685;408686;408687;408688 322447 322447 1 SQLNSQSVEITK Unmodified 1332.6885 0.68850885 430 O60763 USO1 General vesicular transport factor p115 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.549 38.729 2 9.4289E-23 43241 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 175.64 112.67 376750000 0 0 0 18195000 15508000 34447000 26174000 18532000 16357000 34450000 40877000 51124000 37534000 29706000 53848000 48728 430 43697 408689;408690;408691;408692;408693;408694;408695;408696;408697;408698;408699;408700 322448;322449;322450;322451;322452;322453;322454;322455;322456;322457;322458;322459;322460 322448 12 SQLPAEGDAGAEWAAAVLK Unmodified 1882.9425 0.94249171 2427 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.57 3.85 3 1 3 3 1 1 1 1 89.033 86.876 2;3 1.0645E-67 107844 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 148.72 123.87 222590000 0 211380000 1091900 0 0 0 0 0 0 0 0 2407100 0 1264700 6448800 48729 2427 43698 408701;408702;408703;408704;408705;408706;408707 322461;322462;322463;322464;322465;322466 322461 6 SQLPDLSGPHSYSPGR Unmodified 1696.8169 0.81689726 3197 Q86XL3 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 55.466 55.62 3 0.0089669 62903 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 34.928 28.2 41780000 0 0 0 0 3473200 4149200 3572500 0 3038100 4898100 6401400 6349000 5660300 4238600 0 48730 3197 43699 408708;408709;408710;408711;408712;408713;408714;408715;408716 322467;322468;322469;322470;322471;322472 322469 5 SQLPTLEQDGGTQNPVSSPGMSQELR Unmodified 2755.3083 0.30828621 1516 P46937 YAP1 Transcriptional coactivator YAP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 2 1 1 1 1 1 1 76.043 76.213 3 7.1144E-28 87530 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.881 80.849 94606000 0 0 0 0 0 0 4463800 5292400 0 8972300 12317000 15579000 3908100 15385000 28689000 48731 1516 43700 408717;408718;408719;408720;408721;408722;408723;408724;408725 322473;322474;322475;322476;322477;322478;322479;322480;322481 322475 9 SQLQGPSSSEYWK Unmodified 1495.6943 0.69432251 1406 P39880 CUX1 Homeobox protein cut-like 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.578 52.722 2 6.9584E-05 59949 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 101.95 90.803 124740000 0 0 0 7830600 7139500 8192600 9421700 5901600 7650800 11355000 14107000 11615000 15225000 10944000 15361000 48732 1406 43701 408726;408727;408728;408729;408730;408731;408732;408733;408734;408735;408736;408737 322482;322483;322484;322485;322486;322487;322488;322489;322490;322491;322492;322493 322487 11 SQLQISNNR Unmodified 1058.5469 0.54687041 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 22.614 22.778 2 0.00042833 23229 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 146.58 83.105 427100000 0 0 0 79719000 19300000 20578000 25031000 79063000 12575000 21379000 36373000 66500000 42927000 23653000 0 48733 1029 43702 408738;408739;408740;408741;408742;408743;408744;408745;408746;408747;408748 322494;322495;322496;322497;322498;322499;322500;322501;322502;322503;322504;322505 322503 12 SQLQQFSHIK Unmodified 1214.6408 0.6407708 5059 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 40.735 40.914 3 0.02599 44311 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.785 24.413 129070000 0 0 0 5660800 7254100 10950000 9229800 0 8361600 12384000 11620000 19156000 11181000 13251000 20018000 48734 5059 43703 408749;408750;408751;408752;408753;408754;408755;408756;408757;408758;408759 322506 322506 1 SQLSVFEVVPGTDQVDHAAAVK Unmodified 2296.1699 0.16992546 395 O60318 MCM3AP Germinal-center associated nuclear protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 81.651 81.79 3 0.037101 94630 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 19.549 9.282 44167000 0 0 0 0 0 3881900 2996700 4393300 3407700 6447300 0 8294000 0 3696300 11050000 48735 395 43704 408760;408761;408762;408763;408764;408765;408766;408767 322507;322508 322507 2 SQMDGLIPGVEPR Unmodified 1397.6973 0.6972994 5125 Q9Y2X3 NOP58 Nucleolar protein 58 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 75.084 75.14 2 0.016396 86579 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 39.58 22.144 73505000 0 0 0 3137400 3350400 0 0 5088800 5417900 9049600 8580600 11826000 7739300 6515400 12799000 48736 5125 43705 408768;408769;408770;408771;408772;408773;408774;408775;408776;408777 322509;322510 322510 2 SQMDGLIPGVEPR Oxidation (M) 1413.6922 0.69221402 5125 Q9Y2X3 NOP58 Nucleolar protein 58 yes yes 0 1 0 By matching By MS/MS 10 0 2 1 1 63.405 63.456 2 0.0051342 72415 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 45.077 32.122 5670200 0 0 0 0 0 2218800 3451400 0 0 0 0 0 0 0 0 48737 5125 43705 408778;408779 322511 322511 6515 1 SQMESMLISGYALNCVVGSQGMPK 3 Oxidation (M) 2634.1798 0.17977992 1067 P17987 TCP1 T-complex protein 1 subunit alpha yes yes 0 3 0 By MS/MS By MS/MS 10 0 2 1 1 81.642 81.749 3 3.7682E-12 94437 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.704 62.715 22190000 0 0 0 0 0 5816200 0 0 0 0 0 0 0 0 16374000 48738 1067 43706 408780;408781 322512;322513 322513 1516;1517;1518 2 SQMFEGVAR Unmodified 1023.4808 0.48076468 5054 Q9UPQ0 LIMCH1 LIM and calponin homology domains-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 42.582 42.769 2 0.0069711 47805 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 73.665 45.558 155470000 0 0 0 13832000 0 12894000 12620000 13854000 8746200 18279000 26946000 15442000 14854000 18008000 0 48739 5054 43707 408782;408783;408784;408785;408786;408787;408788;408789;408790;408791 322514;322515;322516;322517;322518;322519;322520 322517 7 SQMLAMNIEK Oxidation (M) 1179.5628 0.56277975 1809 P60228 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 39.21 39.331 2 0.0051216 43640 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 61.65 47.443 48777000 0 0 0 3972800 2921800 5494000 3985300 0 4174400 0 6935600 0 7056000 5178900 9057900 48740 1809 43708 408792;408793;408794;408795;408796;408797;408798;408799;408800 322521;322522;322523;322524;322525;322526;322527;322528 322527 2935;2936 8 SQMLAMNIEK 2 Oxidation (M) 1195.5577 0.55769437 1809 P60228 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 27.313 27.434 2 0.0085278 29170 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 44.318 33.452 31746000 0 0 0 0 4287600 7316200 0 3358800 5095800 0 7853900 0 0 3834100 0 48741 1809 43708 408801;408802;408803;408804;408805;408806 322529;322530 322529 2935;2936 2 SQMLAMNIEK Unmodified 1163.5679 0.56786513 1809 P60228 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 59.038 58.95 2 0.025378 67993 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 55.084 30.929 63572000 0 0 0 10251000 8985000 0 0 12378000 0 0 14223000 0 0 17735000 0 48742 1809 43708 408807;408808;408809;408810;408811 322531 322531 1 SQMSGVEAAASDPSEK Oxidation (M) 1608.6937 0.69373016 2768 Q5T1M5 FKBP15 FK506-binding protein 15 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 22.077 22.263 2 1.3541E-07 23195 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 85.845 78.717 35240000 0 0 0 2285100 1626600 3719000 3253100 0 0 5421000 0 5588300 3479500 4792400 5074700 48743 2768 43709 408812;408813;408814;408815;408816;408817;408818;408819;408820 322532;322533;322534;322535;322536;322537 322534 4398 5 SQMSGVEAAASDPSEK Unmodified 1592.6988 0.69881554 2768 Q5T1M5 FKBP15 FK506-binding protein 15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.178 35.364 2 2.3077E-27 37887 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 157.5 146.97 114980000 0 0 0 6033400 5172800 7646400 6157300 8659000 0 14261000 11401000 15455000 6777900 10475000 22941000 48744 2768 43709 408821;408822;408823;408824;408825;408826;408827;408828;408829;408830;408831;408832 322538;322539;322540;322541;322542;322543;322544;322545;322546;322547;322548;322549 322541 12 SQMTTSFTDPAISMDLLR 2 Oxidation (M) 2044.9445 0.9445419 4343 Q9H147 DNTTIP1 Deoxynucleotidyltransferase terminal-interacting protein 1 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 81.956 81.995 2 4.4684E-05 95105 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 62.042 53.937 24882000 0 0 0 1619300 2581200 3089500 2225300 1956800 2274300 0 4067300 4811800 0 2256400 0 48745 4343 43710 408833;408834;408835;408836;408837;408838;408839;408840;408841 322550;322551;322552;322553;322554 322553 5804;5805 5 SQNFDILQSAISK Unmodified 1449.7464 0.74635808 4724 Q9NXF1 TEX10 Testis-expressed sequence 10 protein yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 79.815 79.769 2 0.00039517 92661 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 93.623 59.662 51228000 0 0 0 5660400 5471700 0 0 0 4834300 0 0 0 17870000 0 17392000 48746 4724 43711 408842;408843;408844;408845;408846 322555;322556;322557 322556 3 SQNGEFMTHK Unmodified 1177.5186 0.51860675 2117 Q05682 CALD1 Caldesmon yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 6 2 2 2 19.338 15.743 2;3 0.01929 19819 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 65.224 47.405 131250000 30310000 84113000 16826000 0 0 0 0 0 0 0 0 0 0 0 0 48747 2117 43712 408847;408848;408849;408850;408851;408852 322558;322559 322559 2 SQNGGEPDFHAVEPYTK Unmodified 1874.8435 0.84350594 1448 P42224 STAT1 Signal transducer and activator of transcription 1-alpha/beta yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 53.624 53.961 3 0.0083069 60364 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 22.051 18.816 44678000 0 0 0 0 0 11898000 0 0 0 0 12118000 0 0 8255800 12406000 48748 1448 43713 408853;408854;408855;408856 322560;322561 322561 2 SQNHPDSRAIMYEETTYSK Oxidation (M) 2272.0066 0.0066248805 1694 P52701 MSH6 DNA mismatch repair protein Msh6 yes yes 0 1 1 By MS/MS By MS/MS 2 0 4 2 2 41.555 36.369 3;4 3.2218E-13 49860 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 100.67 91.156 92547000 64319000 0 28229000 0 0 0 0 0 0 0 0 0 0 0 0 48749 1694 43714 408857;408858;408859;408860 322562;322563;322564;322565;322566 322563 2740 5 SQNHPDSRAIMYEETTYSK Unmodified 2256.0117 0.011710258 1694 P52701 MSH6 DNA mismatch repair protein Msh6 yes yes 0 0 1 By MS/MS By MS/MS 2 0 4 2 2 50.04 44.118 3;4 4.1811E-31 60519 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 111.18 109.15 162700000 131610000 0 31097000 0 0 0 0 0 0 0 0 0 0 0 0 48750 1694 43714 408861;408862;408863;408864 322567;322568;322569;322570;322571 322568 4 SQNIVTDSSSLSAEAIR Unmodified 1776.8854 0.88537076 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 67.504 67.654 2 1.4285E-52 77700 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 162.93 144.79 160450000 0 0 0 0 6537200 15103000 10569000 8465800 4499000 15576000 21326000 20959000 11244000 14923000 31249000 48751 2047 43715 408865;408866;408867;408868;408869;408870;408871;408872;408873;408874;408875 322572;322573;322574;322575;322576;322577;322578;322579;322580;322581;322582 322572 11 SQNPHGLK Unmodified 879.45626 0.45626449 2328 Q13616 CUL1 Cullin-1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 6.1097 3.2911 2 0.017653 5226 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 120.92 53.89 128410000 70931000 0 57476000 0 0 0 0 0 0 0 0 0 0 0 0 48752 2328 43716 408876;408877 322583;322584 322584 1 SQNQGSLAQGK Unmodified 1116.5523 0.55234972 5102 Q9Y2H2 INPP5F Phosphatidylinositide phosphatase SAC2 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 7.3095 7.4159 2 0.016762 5774 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 44.203 18.16 16916000 0 0 0 1178800 1082100 1959400 1794800 2196400 1673600 1199600 0 1728800 1816500 802490 1483100 48753 5102 43717 408878;408879;408880;408881;408882;408883;408884;408885;408886;408887;408888 322585 322585 1 SQNRPQGQSTQPSNAAGTNTTSASTPR Unmodified 2743.287 0.28697392 4899 Q9UHD9 UBQLN2 Ubiquilin-2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 20.068 19.879 3 5.59E-50 20359 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 98.967 92.244 115350000 7306300 0 0 7144600 5867000 6809000 8095200 9297800 6675300 10001000 10136000 13034000 7800200 7777800 15402000 48754 4899 43718 408889;408890;408891;408892;408893;408894;408895;408896;408897;408898;408899;408900;408901 322586;322587;322588;322589;322590;322591;322592;322593;322594;322595;322596;322597;322598;322599;322600;322601;322602 322588 17 SQNSQPEGLLVR Unmodified 1326.6892 0.68917755 488 O75376 NCOR1 Nuclear receptor corepressor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 49.434 49.663 2 2.8029E-05 55159 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 115.78 106.57 205190000 0 0 0 0 9293200 17420000 11259000 14854000 12311000 16708000 20910000 31253000 21120000 26784000 23278000 48755 488 43719 408902;408903;408904;408905;408906;408907;408908;408909;408910;408911;408912 322603;322604;322605;322606;322607;322608;322609;322610;322611;322612 322609 10 SQNTDMVQK Unmodified 1049.4812 0.48115861 2428 Q14677 CLINT1 Clathrin interactor 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 10.494 10.619 2 0.0077875 9359 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 71.501 46.503 65242000 0 0 0 3532800 3915500 5780600 6794800 5382300 4781200 3612700 8707300 0 7911100 5832900 8990800 48756 2428 43720 408913;408914;408915;408916;408917;408918;408919;408920;408921;408922;408923 322613;322614;322615;322616;322617 322616 3 SQNTELASTASLLR Unmodified 1489.7736 0.77363546 1054 P17535 JUND Transcription factor jun-D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.081 70.158 2 5.1554E-13 79821 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 131.43 106.58 100170000 0 0 0 4292600 5894800 9885700 7522000 5010500 6392200 8259700 11730000 12381000 7410200 8941800 12445000 48757 1054 43721 408924;408925;408926;408927;408928;408929;408930;408931;408932;408933;408934;408935 322618;322619;322620;322621;322622;322623;322624;322625;322626;322627;322628 322620 11 SQNVMAAASIANIVK Oxidation (M) 1531.8028 0.8028271 1067 P17987 TCP1 T-complex protein 1 subunit alpha yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 2 1 1 1 1 1 2 73.402 73.466 2;3 8.8312E-10 84895 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 91.914 75.69 383890000 0 0 0 0 37377000 78881000 56635000 29434000 34793000 73892000 9402900 0 63475000 0 0 48758 1067 43722 408936;408937;408938;408939;408940;408941;408942;408943;408944;408945 322629;322630;322631;322632;322633;322634;322635;322636 322635 1519 8 SQNWEMAIK Oxidation (M) 1121.5175 0.51754412 2162 Q08752 PPID Peptidyl-prolyl cis-trans isomerase D yes yes 0 1 0 By MS/MS 2 0 1 1 52.057 46.284 2 0.026681 60268 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.27 53.282 14160000 0 14160000 0 0 0 0 0 0 0 0 0 0 0 0 0 48759 2162 43723 408946 322637 322637 1 SQPAASTLESK Unmodified 1117.5615 0.56151742 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 0 By MS/MS 10 0 1 1 20.048 20.026 2 0.048021 20737 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 35.541 2.7008 3079000 0 0 0 0 0 0 3079000 0 0 0 0 0 0 0 0 48760 1492 43724 408947 322638 322638 1 SQPAPAEFRAQLDPAFIK Unmodified 1985.0371 0.037060793 1186 P25325 MPST 3-mercaptopyruvate sulfurtransferase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 84.131 79.009 3 0.0011101 96668 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 51.606 42.026 147170000 34684000 66631000 45855000 0 0 0 0 0 0 0 0 0 0 0 0 48761 1186 43725 408948;408949;408950 322639;322640;322641;322642 322641 4 SQPDMAIMAVNSFVK Unmodified 1636.7953 0.79529888 1937 P63010 AP2B1 AP-2 complex subunit beta yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 92.034 88.343 2 0.0016483 109734 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.431 63.996 147160000 0 146220000 947200 0 0 0 0 0 0 0 0 0 0 0 0 48762 1937 43726 408951;408952 322643 322643 1 SQPDMAIMAVNSFVK 2 Oxidation (M) 1668.7851 0.78512813 1937 P63010 AP2B1 AP-2 complex subunit beta yes yes 0 2 0 By MS/MS 2 0 1 1 82.361 77.656 2 0.041825 96613 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 40.516 25.25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48763 1937 43726 408953 322644 322644 1 SQPDMAIMAVNTFVK 2 Oxidation (M) 1682.8008 0.80077819 2178 Q10567 AP1B1 AP-1 complex subunit beta-1 yes yes 0 2 0 By MS/MS 2.5 0.5 1 1 2 80.194 76.172 2 0.0019475 94496 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.676 55.584 29016000 0 29016000 0 0 0 0 0 0 0 0 0 0 0 0 0 48764 2178 43727 408954;408955 322645 322645 3550;3551 1 SQPDMAIMAVNTFVK Oxidation (M) 1666.8059 0.80586357 2178 Q10567 AP1B1 AP-1 complex subunit beta-1 yes yes 0 1 0 By MS/MS 2.33 0.471 2 1 3 86.314 82.031 2 0.00052774 102995 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.466 69.82 112370000 0 112370000 0 0 0 0 0 0 0 0 0 0 0 0 0 48765 2178 43727 408956;408957;408958 322646;322647 322647 3550;3551 2 SQPDMAIMAVNTFVK Unmodified 1650.8109 0.81094895 2178 Q10567 AP1B1 AP-1 complex subunit beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 4.83 3.67 3 1 2 3 1 1 1 91.41 88.872 2;3 0.0017547 102629 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.207 35.517 317260000 0 308440000 1603600 0 0 0 0 0 0 2695800 0 0 0 0 4523100 48766 2178 43727 408959;408960;408961;408962;408963;408964 322648;322649;322650 322650 2 SQPDPVDTPTSSK Unmodified 1357.6361 0.63613893 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 24.226 24.425 2 0.0085796 25824 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 55.401 43.354 42490000 0 0 0 3326200 0 7004400 4306300 0 8621300 3554700 4490800 0 0 5697200 5488900 48767 1492 43728 408965;408966;408967;408968;408969;408970;408971;408972 322651;322652;322653;322654;322655;322656;322657;322658 322655 6 SQPDPVDTPTSSKPQSK Unmodified 1797.8745 0.87447172 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.203 22.408 3 7.1014E-05 23312 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 56.215 44.572 135200000 0 0 0 10254000 7878700 6431000 9141700 8426300 6697800 14730000 13643000 22650000 9143400 11297000 14909000 48768 1492 43729 408973;408974;408975;408976;408977;408978;408979;408980;408981;408982;408983;408984 322659;322660;322661;322662;322663;322664;322665;322666;322667;322668;322669;322670;322671 322666 13 SQPEPSPVLSQLSQR Unmodified 1651.8529 0.85294842 2779 Q5T6F2 UBAP2 Ubiquitin-associated protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.763 67.844 2 1.396E-09 77980 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 111.12 95.583 461970000 0 0 0 28304000 26211000 25937000 40046000 35427000 34245000 40629000 55934000 43088000 34847000 37422000 59880000 48769 2779 43730 408985;408986;408987;408988;408989;408990;408991;408992;408993;408994;408995;408996 322672;322673;322674;322675;322676;322677;322678;322679;322680;322681;322682;322683;322684;322685 322673 14 SQPERDWVLNEFR Unmodified 1674.8114 0.81141795 3670 Q92841 DDX17 Probable ATP-dependent RNA helicase DDX17 yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 75.331 75.506 3 0.01165 86518 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.005 26.378 45412000 0 0 0 0 0 0 0 3128000 5774500 5912900 0 4536400 3479800 3176300 19404000 48770 3670 43731 408997;408998;408999;409000;409001;409002;409003 322686 322686 1 SQPGSSASSSSGVK Unmodified 1264.5895 0.58952309 2164 Q08AD1 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.8224 6.9461 2 0.0017033 4686 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 57.019 46.788 38911000 0 0 0 2338500 2384900 3948100 3165900 2916000 3087700 3761900 5215800 2034400 2748500 2296200 5012600 48771 2164 43732 409004;409005;409006;409007;409008;409009;409010;409011;409012;409013;409014;409015 322687;322688;322689;322690;322691;322692;322693;322694;322695;322696;322697 322691 11 SQPMGLWR Oxidation (M) 989.47529 0.47528537 1185 P25311 AZGP1 Zinc-alpha-2-glycoprotein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 42.425 42.51 2 0.017847 48399 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 57.559 36.405 186650000 0 0 0 46728000 8003700 32003000 6964600 10851000 0 11429000 0 52914000 9281300 8477300 0 48772 1185 43733 409016;409017;409018;409019;409020;409021;409022;409023;409024 322698;322699;322700;322701 322701 1718 4 SQPNHTPAGPPGPSSNPVSNGK Unmodified 2126.0141 0.01409352 4084 Q9BQ15 NABP2 SOSS complex subunit B1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.221 32.407 3 2.6752E-13 35267 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 72.99 67.988 91453000 0 0 0 3825600 4706800 7497400 7574900 8915400 4271100 8357500 10085000 13462000 5874400 6560000 10323000 48773 4084 43734 409025;409026;409027;409028;409029;409030;409031;409032;409033;409034;409035;409036 322702;322703;322704;322705;322706;322707;322708;322709;322710;322711;322712;322713;322714;322715;322716;322717 322709 16 SQPPARLISGEEHFSSK Unmodified 1868.9381 0.93807503 4145 Q9BTE7 DCUN1D5 DCN1-like protein 5 yes yes 0 0 1 By MS/MS 2 0 1 1 56.48 48.333 3 0.03147 66001 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 19.057 11.103 18390000 18390000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48774 4145 43735 409037 322718 322718 1 SQPPLLPASAETRK Acetyl (Protein N-term) 1535.8308 0.83075641 4258 Q9BZ29 DOCK9 Dedicator of cytokinesis protein 9 yes yes 1 0 1 By MS/MS 2 0 1 1 64.611 58.693 2 0.018188 75095 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 48.513 33.541 33060000 0 33060000 0 0 0 0 0 0 0 0 0 0 0 0 0 48775 4258 43736 409038 322719 322719 1 SQPPSIYNASATSVFHK Unmodified 1832.9057 0.90571227 381 O43933 PEX1 Peroxisome biogenesis factor 1 yes yes 0 0 0 By MS/MS 2 0 1 1 74.385 66.255 3 0.0019979 87608 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 39.585 33.033 14061000 14061000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48776 381 43737 409039 322720;322721 322720 2 SQPPTRIPTLVDK Unmodified 1450.8144 0.81437807 2866 Q6AWC2 WWC2 Protein WWC2 yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 55.344 55.515 3 0.026903 62067 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 25.322 11.358 20622000 0 0 0 0 1683300 0 3145700 0 0 2921400 3172200 0 2584200 3438300 3676700 48777 2866 43738 409040;409041;409042;409043;409044;409045;409046 322722 322722 1 SQPSSSVPSSYIR Unmodified 1393.6838 0.68375782 4288 Q9C0D5 TANC1 Protein TANC1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 2 1 2 1 2 46.428 46.707 2 0.0051158 52094 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 49.5 30.406 766390000 0 0 0 0 56322000 0 0 0 61813000 0 195090000 0 0 133290000 319880000 48778 4288 43739 409047;409048;409049;409050;409051;409052;409053;409054;409055;409056 322723;322724;322725;322726;322727;322728 322726 6 SQPVSLPEELNRVR Unmodified 1622.874 0.87401821 3618 Q92541 RTF1 RNA polymerase-associated protein RTF1 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 67.338 67.506 3 0.0067553 77277 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 40.552 25.95 50759000 0 0 0 0 4080600 0 4538500 4525700 0 7164900 6258400 9518900 4137700 4410900 6123300 48779 3618 43740 409057;409058;409059;409060;409061;409062;409063;409064;409065 322729;322730;322731;322732 322732 4 SQPVSQPLTYESGPDEVR Unmodified 1987.9487 0.9486993 4423 Q9H6S3 EPS8L2 Epidermal growth factor receptor kinase substrate 8-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 2 1 1 1 1 1 1 58.098 58.356 2 4.8031E-26 66529 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 126.71 113.28 71509000 0 0 0 0 0 6800300 5807200 5124800 4440000 6882600 9588000 7849100 9075200 5430800 10511000 48780 4423 43741 409066;409067;409068;409069;409070;409071;409072;409073;409074;409075;409076;409077 322733;322734;322735;322736;322737;322738;322739;322740;322741;322742 322734 10 SQQALQERDVAIEEK Unmodified 1742.8799 0.87989145 3964 Q96R06 SPAG5 Sperm-associated antigen 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 39.322 38.532 3 4.6823E-06 43209 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 82.102 66.466 143500000 0 23581000 2508400 12055000 11218000 10844000 16125000 11847000 11748000 14646000 0 0 17652000 11275000 0 48781 3964 43742 409078;409079;409080;409081;409082;409083;409084;409085;409086;409087;409088;409089;409090 322743;322744;322745;322746;322747;322748;322749;322750;322751;322752;322753;322754 322754 11 SQQCQGNELTRPSASSQEK Unmodified 2133.9709 0.97090808 5045 Q9UNY4 TTF2 Transcription termination factor 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.187 20.35 3 1.6531E-08 19824 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 82.259 69.222 61929000 0 0 0 2531700 4215000 6133400 4826000 4460600 3224000 6792200 8315500 8071300 7579500 5779800 0 48782 5045 43743 409091;409092;409093;409094;409095;409096;409097;409098;409099;409100;409101;409102 322755;322756;322757;322758;322759;322760;322761;322762;322763;322764;322765;322766 322762 12 SQQDPAGPGLPAQSDR Unmodified 1622.7649 0.76486169 2270 Q13322 GRB10 Growth factor receptor-bound protein 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.541 36.723 2 2.0399E-08 40714 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 90.926 72.18 65469000 0 0 0 4186700 2989400 5049700 4778200 4162300 3948400 6031100 6331000 6930200 7245400 4940100 8876200 48783 2270 43744 409103;409104;409105;409106;409107;409108;409109;409110;409111;409112;409113;409114 322767;322768;322769;322770;322771;322772;322773;322774;322775;322776;322777;322778 322767 12 SQQENPESQPQK Unmodified 1398.6375 0.63753591 581 O94762 RECQL5 ATP-dependent DNA helicase Q5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.3552 7.4842 2 0.0046235 5312 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 68.893 46.807 23427000 0 0 0 1303900 1161400 1574800 1379400 1413600 1690700 1781400 3915600 3390900 1687000 1736100 2392200 48784 581 43745 409115;409116;409117;409118;409119;409120;409121;409122;409123;409124;409125;409126 322779;322780;322781;322782;322783;322784 322779 6 SQQERDWVLNEFK Unmodified 1677.8111 0.8110836 1062 P17844 DDX5 Probable ATP-dependent RNA helicase DDX5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 2 73.316 73.067 2;3 0.002383 83082 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.621 34.33 146210000 0 37463000 0 0 0 8756200 0 6698000 8083700 7838700 7287100 6988700 7134700 8631600 47330000 48785 1062 43746 409127;409128;409129;409130;409131;409132;409133;409134;409135;409136;409137 322785;322786;322787;322788;322789;322790 322787 6 SQQIAALIEDHMTGK Unmodified 1640.8192 0.81920545 3645 Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A yes yes 0 0 0 By MS/MS 2 0 1 1 84.347 79.604 3 8.4366E-06 99025 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.566 85.797 29316000 0 29316000 0 0 0 0 0 0 0 0 0 0 0 0 0 48786 3645 43747 409138 322791 322791 1 SQQLESLQEIK Unmodified 1301.6827 0.68269519 2510 Q15276 RABEP1 Rab GTPase-binding effector protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 58.912 53.572 2 0.023047 68523 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 57.174 37.033 139740000 0 139740000 0 0 0 0 0 0 0 0 0 0 0 0 0 48787 2510 43748 409139;409140 322792 322792 1 SQQLSALQEENVK Unmodified 1472.7471 0.74708636 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 46.346 45.244 2 1.617E-33 57298 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 219.89 184.45 359980000 5960300 146690000 0 10229000 13699000 11314000 16602000 9615200 11442000 19937000 22137000 27827000 16196000 20230000 28101000 48788 1286 43749 409141;409142;409143;409144;409145;409146;409147;409148;409149;409150;409151;409152;409153;409154;409155 322793;322794;322795;322796;322797;322798;322799;322800;322801;322802;322803;322804;322805;322806 322796 14 SQQNDEEPVATSQLLK Unmodified 1785.8745 0.87447172 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 60.146 59.389 2 2.9959E-38 75117 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 135.02 110.16 49175000 0 12881000 0 0 4993400 4838600 0 4951000 0 4517000 0 0 0 5635900 11358000 48789 2775 43750 409156;409157;409158;409159;409160;409161;409162;409163;409164;409165 322807;322808;322809;322810;322811;322812;322813;322814;322815;322816;322817 322809 11 SQQPLKPQVHTPVATVK Unmodified 1857.0472 0.047231549 2932 Q6P3W7 SCYL2 SCY1-like protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 1 2 2 2 2 2 2 2 2 2 2 42.763 43.002 3;4 0.00068502 48138 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 54.368 38.484 1325000000 0 0 0 39180000 41681000 99095000 94259000 106280000 94670000 88338000 118170000 183440000 134940000 105140000 219870000 48790 2932 43751 409166;409167;409168;409169;409170;409171;409172;409173;409174;409175;409176;409177;409178;409179;409180;409181;409182;409183;409184;409185;409186;409187 322818;322819;322820;322821;322822;322823;322824;322825;322826;322827;322828;322829;322830;322831;322832 322818 12 SQQQDDIEELETK Unmodified 1561.7108 0.71076044 4393 Q9H4A3 WNK1 Serine/threonine-protein kinase WNK1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 47.693 47.59 2 3.9838E-20 53102 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 188.06 141.9 112820000 0 0 0 0 32213000 50886000 0 0 29724000 0 0 0 0 0 0 48791 4393 43752 409188;409189;409190;409191;409192;409193;409194;409195;409196;409197;409198 322833;322834;322835;322836;322837;322838;322839;322840;322841;322842;322843 322841 11 SQQQPTPVTPK Unmodified 1209.6354 0.63535107 635 O95251 KAT7 Histone acetyltransferase KAT7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.864 21.071 2 0.00039688 21461 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 128.03 90.96 152020000 0 0 0 7077000 6539100 8214300 6983300 5376500 6262200 18926000 29894000 32739000 11736000 7057400 11215000 48792 635 43753 409199;409200;409201;409202;409203;409204;409205;409206;409207;409208;409209;409210 322844;322845;322846;322847;322848;322849;322850;322851;322852;322853 322848 6 SQQQQLVESLHK Unmodified 1423.7419 0.74194141 3081 Q7Z3B4 NUP54 Nucleoporin p54 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 40.14 40.268 3 0.00037731 44914 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 77.279 72.938 439040000 0 0 0 36070000 26242000 28231000 39795000 43557000 28604000 52628000 36378000 44224000 51029000 52278000 0 48793 3081 43754 409211;409212;409213;409214;409215;409216;409217;409218;409219;409220;409221 322854;322855;322856;322857;322858 322857 2 SQQQQQQQQQQQQQQQQQPMPR Unmodified 2763.2855 0.28553413 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 20.302 20.364 3 0.0038123 20973 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 29.118 22.086 20394000 0 0 0 1283500 2520900 2296200 2133700 2203100 1972300 0 0 0 4106900 3877800 0 48794 5262 43755 409222;409223;409224;409225;409226;409227;409228;409229 322859;322860 322860 2 SQQSEVTRILDGK Unmodified 1459.7631 0.76307078 4361 Q9H299 SH3BGRL3 SH3 domain-binding glutamic acid-rich-like protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 2 3 2 63.107 57.291 2;3 0.010375 70718 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 50.843 44.971 448920000 76789000 226490000 145640000 0 0 0 0 0 0 0 0 0 0 0 0 48795 4361 43756 409230;409231;409232;409233;409234;409235;409236 322861;322862;322863;322864 322864 2 SQQSVSLSK Unmodified 962.50327 0.50327426 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 15.629 15.927 2 0.034565 15971 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 46.462 10.582 91148000 0 0 0 0 0 0 7413800 0 0 9359100 16162000 12857000 13465000 12404000 19486000 48796 2193 43757 409237;409238;409239;409240;409241;409242;409243 322865 322865 1 SQQTLDTPK Unmodified 1016.5138 0.51383895 2779 Q5T6F2 UBAP2 Ubiquitin-associated protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.676 16.855 2 0.005134 16616 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 82.563 47.207 265180000 0 0 0 12744000 12726000 18365000 20618000 14240000 17912000 22533000 32153000 26782000 26654000 24150000 36305000 48797 2779 43758 409244;409245;409246;409247;409248;409249;409250;409251;409252;409253;409254;409255 322866;322867;322868;322869;322870;322871;322872;322873;322874;322875;322876;322877 322867 8 SQQTSFQSSPCNK Unmodified 1497.6518 0.65180577 2221 Q12986 NFX1 Transcriptional repressor NF-X1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 19.124 19.303 2 0.00096611 18569 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.693 72.044 16676000 0 0 0 1699000 1333200 1849500 0 0 1100300 2723800 2265000 0 1777100 1619400 2308400 48798 2221 43759 409256;409257;409258;409259;409260;409261;409262;409263;409264 322878;322879 322878 2 SQQVAAAAHEANK Unmodified 1323.6531 0.6531264 2195 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.53 3.65 5 1 13 2 3 1 1 1 1 2 1 1 1 1 2 1 1 10.359 9.37 2;3 0.0015468 12238 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.08 80.915 441620000 181080000 158380000 5722800 6754500 6848200 7982700 12823000 5240800 5011500 8100300 0 13966000 11653000 6331400 11723000 48799 2195 43760 409265;409266;409267;409268;409269;409270;409271;409272;409273;409274;409275;409276;409277;409278;409279;409280;409281;409282;409283 322880;322881;322882;322883;322884;322885;322886;322887 322881 3 SQRAGAAGGPEEEAEK Unmodified 1585.7332 0.73322721 3570 Q8WW12 PCNP PEST proteolytic signal-containing nuclear protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 12.376 9.14 3 0.00022897 12160 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 55.437 44.649 149520000 32963000 104100000 12462000 0 0 0 0 0 0 0 0 0 0 0 0 48800 3570 43761 409284;409285;409286;409287 322888;322889;322890;322891 322888 3 SQRAGAAGGPEEEAEKPVK Unmodified 1909.9494 0.949368 3570 Q8WW12 PCNP PEST proteolytic signal-containing nuclear protein yes yes 0 0 2 By MS/MS By MS/MS By MS/MS 2 0 5 1 2 2 21.679 18.083 3;4 4.2685E-49 23115 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 141.97 131.84 589980000 88079000 18860000 483040000 0 0 0 0 0 0 0 0 0 0 0 0 48801 3570 43762 409288;409289;409290;409291;409292 322892;322893;322894;322895 322895 2 SQRDPLAADESAPQR Unmodified 1639.7914 0.79141079 3850 Q96GA3 LTV1 Protein LTV1 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 29.82 30.047 3 0.00097367 32145 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 51.359 39.886 77425000 0 0 0 0 4553500 5457500 3871500 3525700 3770700 8627700 9180700 16434000 0 8468000 13536000 48802 3850 43763 409293;409294;409295;409296;409297;409298;409299;409300;409301;409302 322896;322897;322898;322899;322900;322901;322902 322902 5 SQRDREEALHQFR Unmodified 1670.8237 0.82371397 170 O00571;O15523 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 0 0 2 By MS/MS By matching 10 0 2 1 1 23.332 23.999 4 0.010859 24757 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 34.179 24.107 22528000 0 0 0 0 0 0 0 0 0 0 0 8315000 0 0 14213000 48803 170 43764 409303;409304 322903 322903 1 SQREGQGEGETQEAAAATAAAR Unmodified 2188.0105 0.010464705 1802 P58107 EPPK1 Epiplakin yes no 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 29.677 29.928 3 0.0022956 32162 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 30.976 27.878 28334000 0 0 0 0 2133600 0 2853300 1892300 0 3678600 0 6463400 3665800 2567500 5079900 48804 1802 43765 409305;409306;409307;409308;409309;409310;409311;409312 322904;322905;322906;322907 322906 4 SQRPEESEPLEK Unmodified 1427.6892 0.68923713 2797 Q5TFE4 NT5DC1 5'-nucleotidase domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 17.823 18.011 3 1.662E-05 17488 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 92.856 80.588 120800000 0 0 0 5500900 3208900 9608800 3119100 4730400 3310700 7301600 15007000 19966000 6224200 11570000 31248000 48805 2797 43766 409313;409314;409315;409316;409317;409318;409319;409320;409321;409322;409323;409324 322908;322909;322910;322911;322912;322913;322914;322915;322916;322917;322918 322914 10 SQRQHTDGTTISK Unmodified 1457.7223 0.7222686 3189 Q86X53 ERICH1 Glutamate-rich protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 6.6905 3.8657 3 2.077E-08 6728 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.61 78.537 79359000 72486000 0 6873300 0 0 0 0 0 0 0 0 0 0 0 0 48806 3189 43767 409325;409326 322919;322920 322919 2 SQRSAVQKPPSTGSAPAIESVD Unmodified 2211.1131 0.11313886 4652 Q9NUQ3 TXLNG Gamma-taxilin yes yes 0 0 2 By MS/MS 2 0 1 1 53.323 45.26 3 0.0032931 62063 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.833 35.583 90140000 90140000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48807 4652 43768 409327 322921;322922 322922 2 SQSAAVTPSSTTSSTR Unmodified 1566.7485 0.74854293 2597 Q16186 ADRM1 Proteasomal ubiquitin receptor ADRM1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 17.967 18.155 2 2.1276E-70 17729 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 190.1 172.87 296600000 0 0 0 16468000 13217000 17485000 17697000 17125000 12226000 28665000 30911000 42442000 20850000 22678000 56835000 48808 2597 43769 409328;409329;409330;409331;409332;409333;409334;409335;409336;409337;409338;409339 322923;322924;322925;322926;322927;322928;322929;322930;322931;322932;322933;322934 322928 11 SQSCGPQPSWGASCPELRPHVEPR Unmodified 2718.2391 0.23910121 2781 Q5T749 KPRP Keratinocyte proline-rich protein yes yes 0 0 1 By MS/MS 10 0 1 1 61.17 60.479 4 0.0001513 70043 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 37.228 34.304 13888000 0 0 0 13888000 0 0 0 0 0 0 0 0 0 0 0 48809 2781 43770 409340 322935 322935 1 SQSEYKPDTPQSGLEYSGIQELEDR Unmodified 2855.3097 0.309726 2604 Q16513 PKN2 Serine/threonine-protein kinase N2 yes yes 0 0 1 By matching By MS/MS By MS/MS 10 0 3 1 1 1 75.62 75.767 3 1.9392E-33 87469 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 94.72 92.178 31585000 0 0 0 0 0 0 4747500 11082000 0 15756000 0 0 0 0 0 48810 2604 43771 409341;409342;409343 322936;322937;322938 322936 3 SQSEYKPDTPQSGLEYSGIQELEDRR Unmodified 3011.4108 0.41083703 2604 Q16513 PKN2 Serine/threonine-protein kinase N2 yes yes 0 0 2 By MS/MS 10 0 1 1 72.708 73.078 4 3.7419E-10 83622 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.658 48.817 14672000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14672000 48811 2604 43772 409344 322939 322939 1 SQSIDTPGVIRR Unmodified 1327.7208 0.72081203 473 O75182 SIN3B Paired amphipathic helix protein Sin3b yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.985 38.166 3 0.0018984 42387 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 43.991 35.616 62625000 0 0 0 3165700 3494400 3997000 4754800 5523700 3981500 6786700 5655500 5814000 6849600 5185700 7416300 48812 473 43773 409345;409346;409347;409348;409349;409350;409351;409352;409353;409354;409355;409356 322940;322941 322940 2 SQSIDTPGVISR Unmodified 1258.6517 0.65172941 3994 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 45.61 46.356 2 0.0060643 51187 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.247 9.9597 81673000 0 0 0 0 0 0 0 0 0 0 0 35799000 0 0 45874000 48813 3994 43774 409357;409358 322942;322943 322942 2 SQSLPGADSLLAK Unmodified 1285.6878 0.68778057 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 66.59 66.634 2 0.018664 76437 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 39.148 30.927 61598000 0 0 0 5405800 3476000 6063500 3757200 4927500 3110800 6695000 6676100 9669600 5597900 6218800 0 48814 5189 43775 409359;409360;409361;409362;409363;409364;409365;409366;409367;409368;409369 322944;322945;322946;322947 322945 4 SQSLPGADSLLAKPIDK Unmodified 1738.9465 0.94651445 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 71.163 71.246 3 0.00027882 81773 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 47.09 36.236 59220000 0 0 0 3833800 5508700 0 4690800 5407400 1414400 8235400 4936600 9073900 5556100 5074500 5488200 48815 5189 43776 409370;409371;409372;409373;409374;409375;409376;409377;409378;409379;409380 322948;322949;322950;322951;322952;322953;322954 322952 7 SQSLQDQPTR Unmodified 1158.5629 0.56291441 3330 Q8N4C8 MINK1 Misshapen-like kinase 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.29 14.453 2 0.0023779 13037 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 84.213 43.183 29671000 0 0 0 1651100 1547500 2650400 1450400 2546200 1403800 3072500 3107000 3840700 2432000 2486800 3483000 48816 3330 43777 409381;409382;409383;409384;409385;409386;409387;409388;409389;409390;409391;409392 322955;322956;322957;322958;322959;322960;322961;322962;322963;322964 322961 10 SQSMDIDGVSCEK Unmodified 1454.6017 0.60174403 623 O95155 UBE4B Ubiquitin conjugation factor E4 B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 40.448 40.629 2 0.0010222 44161 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 79.82 74.618 22701000 0 0 0 0 1866100 4786800 0 0 0 4277400 0 0 2285100 3730900 5754700 48817 623 43778 409393;409394;409395;409396;409397;409398 322965;322966 322966 2 SQSNGVLATENK Unmodified 1246.6153 0.61534391 3061 Q7LBC6 KDM3B Lysine-specific demethylase 3B yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.963 19.158 2 2.2969E-05 19188 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 102.53 75.642 74279000 0 0 0 4648900 3403500 8364500 4053600 4422300 4972700 6404300 6820000 7140700 7123500 5321300 11604000 48818 3061 43779 409399;409400;409401;409402;409403;409404;409405;409406;409407;409408;409409;409410 322967;322968;322969;322970;322971;322972;322973;322974;322975;322976 322975 10 SQSNGVLATENKPLGFSFGCSSAQEAQK Unmodified 2941.3876 0.38759916 3061 Q7LBC6 KDM3B Lysine-specific demethylase 3B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 75.72 75.909 3 8.7612E-40 87603 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 86.48 83.847 56089000 0 0 0 0 0 0 0 8378200 0 0 0 15905000 7302300 7536900 16967000 48819 3061 43780 409411;409412;409413;409414;409415 322977;322978;322979;322980;322981 322981 4 SQSPAASDCSSSSSSASLPSSGR Unmodified 2198.9346 0.93458215 694 O95817 BAG3 BAG family molecular chaperone regulator 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 1 2 2 2 2 2 2 2 29.745 29.938 2;3 4.2207E-55 32171 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 135.45 124.01 152270000 0 0 0 8393200 9326300 8461400 11044000 5880200 10339000 11731000 15841000 14483000 13176000 20048000 23548000 48820 694 43781 409416;409417;409418;409419;409420;409421;409422;409423;409424;409425;409426;409427;409428;409429;409430;409431;409432;409433;409434;409435;409436;409437;409438 322982;322983;322984;322985;322986;322987;322988;322989;322990;322991;322992;322993;322994;322995;322996 322994 15 SQSQLDLCK Unmodified 1077.5125 0.51245874 1982 P78411 IRX5 Iroquois-class homeodomain protein IRX-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 29.337 29.545 2 0.017596 31931 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 55.549 39.347 12887000 0 0 0 0 0 2538200 0 0 0 5678200 4671100 0 0 0 0 48821 1982 43782 409439;409440;409441 322997;322998;322999 322998 3 SQSSDTEQQSPTSGGGK Unmodified 1679.7235 0.72345039 1166 P23588 EIF4B Eukaryotic translation initiation factor 4B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.7837 6.9073 2 0 4332 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 372.73 363.04 250990000 0 0 0 7493500 8467300 7639500 11502000 11554000 13156000 14592000 45977000 25730000 12548000 36311000 56018000 48822 1166 43783 409442;409443;409444;409445;409446;409447;409448;409449;409450;409451;409452;409453 323000;323001;323002;323003;323004;323005;323006;323007;323008;323009;323010;323011 323003 12 SQSSEGVSSLSSSPSNSLETQSQSLSR Unmodified 2755.2744 0.27440312 623 O95155 UBE4B Ubiquitin conjugation factor E4 B yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 61.954 62.217 3 6.5117E-14 71107 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 52.707 49.577 42637000 0 0 0 0 0 5091500 0 2975900 3636000 5323500 4491200 5657100 0 6351200 9110200 48823 623 43784 409454;409455;409456;409457;409458;409459;409460;409461 323012;323013;323014;323015;323016;323017;323018;323019 323013 8 SQSSGSSATHPISVPGAR Unmodified 1724.8442 0.84417465 5203 Q9Y4H2 IRS2 Insulin receptor substrate 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 2 1 1 1 2 2 34.573 34.712 2;3 4.4542E-11 37502 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 69.737 52.518 173050000 0 0 0 1731700 1160200 23183000 22563000 15938000 15941000 24220000 0 27877000 20720000 19717000 0 48824 5203 43785 409462;409463;409464;409465;409466;409467;409468;409469;409470;409471;409472;409473;409474 323020;323021;323022;323023;323024;323025;323026;323027 323027 8 SQSSHSYDDSTLPLIDR Unmodified 1919.8861 0.88609904 426 O60716 CTNND1 Catenin delta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 63.713 63.798 3 1.8932E-14 72074 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.88 68.825 129000000 0 0 0 8954700 5256700 9940700 8608000 8752700 0 17432000 11105000 13882000 12933000 10203000 21937000 48825 426 43786 409475;409476;409477;409478;409479;409480;409481;409482;409483;409484;409485 323028;323029;323030;323031;323032;323033;323034;323035;323036;323037;323038;323039;323040 323030 13 SQSSIVPEEEQAANK Unmodified 1615.7689 0.76894402 3714 Q969G3 SMARCE1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.667 36.849 2 6.1484E-15 39525 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 120.57 97.887 118740000 0 0 0 4606900 4780500 16573000 5993500 5009500 8475600 10461000 6510000 11509000 12081000 9111500 23625000 48826 3714 43787 409486;409487;409488;409489;409490;409491;409492;409493;409494;409495;409496;409497 323041;323042;323043;323044;323045;323046;323047;323048 323043 8 SQSSIVPEEEQAANKGEEK Unmodified 2058.9706 0.97055695 3714 Q969G3 SMARCE1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 33.971 33.934 3 5.1688E-50 37226 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 118.37 113.37 249780000 0 0 0 27083000 35538000 0 38661000 39700000 0 0 108790000 0 0 0 0 48827 3714 43788 409498;409499;409500;409501;409502 323049;323050;323051;323052;323053 323049 5 SQSSSAEQSFLFSR Unmodified 1559.7216 0.72159989 5278 Q9Y6D9 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 66.584 66.741 2 1.101E-05 75626 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 112.5 86.056 54793000 0 0 0 0 3198300 0 4768000 5006100 2884300 7251100 0 5392200 6713400 5329100 14250000 48828 5278 43789 409503;409504;409505;409506;409507;409508;409509;409510;409511;409512 323054;323055;323056;323057;323058;323059;323060;323061;323062;323063 323057 10 SQSSSAEQSFLFSREEADTLR Unmodified 2374.1037 0.10369639 5278 Q9Y6D9 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.071 74.131 3 8.0343E-12 84916 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.586 73.985 243450000 0 0 0 5446000 5955700 30039000 9443300 18459000 17825000 21257000 19730000 25356000 15522000 17614000 56808000 48829 5278 43790 409513;409514;409515;409516;409517;409518;409519;409520;409521;409522;409523;409524 323064;323065;323066;323067;323068;323069;323070;323071;323072;323073;323074;323075 323067 12 SQSSTSPEGQALENR Unmodified 1589.7281 0.72814183 386 O60239 SH3BP5 SH3 domain-binding protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.353 26.553 2 0.00011092 28398 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 72.496 64.609 44668000 0 0 0 2399400 2346600 3434000 3652500 3326100 2599900 4458800 5697300 4312100 4605300 3706000 4130000 48830 386 43791 409525;409526;409527;409528;409529;409530;409531;409532;409533;409534;409535;409536 323076;323077;323078;323079;323080;323081;323082;323083;323084;323085;323086;323087 323077 12 SQSTAQNLTSDIQR Unmodified 1547.754 0.75396265 3917 Q96LB3 IFT74 Intraflagellar transport protein 74 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 43.269 43.4 2 0.0011383 48666 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 72.958 53.826 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48831 3917 43792 409537;409538;409539 323088;323089;323090 323089 3 SQSTTFNPDDMSEPEFK Oxidation (M) 1974.8153 0.81530186 3180 Q86W92 PPFIBP1 Liprin-beta-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 1 2 1 2 2 2 2 2 57.031 57.147 2 1.1836E-18 64568 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 101.43 96.883 369400000 0 0 0 21668000 25290000 27697000 39398000 12035000 26692000 17649000 49478000 49019000 40749000 25046000 34677000 48832 3180 43793 409540;409541;409542;409543;409544;409545;409546;409547;409548;409549;409550;409551;409552;409553;409554;409555;409556;409557;409558;409559;409560;409561 323091;323092;323093;323094;323095;323096;323097;323098;323099;323100;323101;323102;323103;323104 323097 4806 13 SQSTTFNPDDMSEPEFK Unmodified 1958.8204 0.82038724 3180 Q86W92 PPFIBP1 Liprin-beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 71.163 71.266 2 7.5403E-39 82102 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 183.89 175.38 325270000 0 0 0 15922000 0 32410000 23377000 28800000 15947000 45453000 0 56450000 0 35098000 71815000 48833 3180 43793 409562;409563;409564;409565;409566;409567;409568;409569;409570;409571;409572 323105;323106;323107;323108;323109;323110;323111;323112;323113;323114;323115;323116 323106 11 SQSWDDRGER Unmodified 1234.5327 0.53267691 497 O75420 GIGYF1 PERQ amino acid-rich with GYF domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 13.631 13.788 3 0.03589 13363 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 32.329 23.375 34622000 0 0 0 0 2818000 2859200 1708100 0 3551100 4797900 0 5366600 4032800 3834500 5654200 48834 497 43794 409573;409574;409575;409576;409577;409578;409579;409580;409581 323117;323118 323117 2 SQSWEERGDR Unmodified 1248.5483 0.54832698 2994 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 13.667 13.862 3 0.013797 12549 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.918 29.814 59137000 0 0 0 0 3126400 3684500 3823800 0 0 5739300 7054500 8418100 8714600 7121100 11455000 48835 2994 43795 409582;409583;409584;409585;409586;409587;409588;409589;409590 323119;323120;323121;323122 323121 4 SQTAMSETYDFLFK Acetyl (Protein N-term);Oxidation (M) 1724.7604 0.76035317 1103 P20338 RAB4A Ras-related protein Rab-4A yes yes 1 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.69 3.07 1 1 11 1 1 1 1 1 1 1 1 1 1 1 1 1 91.746 91.826 2 8.36E-20 105013 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 129.84 115.15 89428000 7569800 18601000 0 1173800 3987100 4317700 0 4777900 3470700 11570000 8630600 7934700 2958400 4395600 10041000 48836 1103 43796 409591;409592;409593;409594;409595;409596;409597;409598;409599;409600;409601;409602;409603 323123;323124;323125;323126;323127;323128;323129;323130;323131;323132;323133;323134;323135;323136;323137;323138 323124 1587 16 SQTAMSETYDFLFK Acetyl (Protein N-term) 1708.7654 0.76543854 1103 P20338 RAB4A Ras-related protein Rab-4A yes yes 1 0 0 By MS/MS 2 0 1 1 98.642 93.907 2 6.8567E-30 116155 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 161.93 145.35 128860000 0 128860000 0 0 0 0 0 0 0 0 0 0 0 0 0 48837 1103 43796 409604 323139 323139 1 SQTDQLVLIFAGK Unmodified 1418.7769 0.77692993 4899 Q9UHD9 UBQLN2 Ubiquilin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 88.577 88.393 2 7.5427E-13 102914 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 133.81 122.59 167700000 0 1719100 0 3664500 5744800 11434000 8391300 11801000 14241000 17828000 13145000 17727000 10479000 14220000 37307000 48838 4899 43797 409605;409606;409607;409608;409609;409610;409611;409612;409613;409614;409615;409616;409617 323140;323141;323142;323143;323144;323145;323146;323147;323148;323149;323150;323151;323152;323153;323154;323155;323156;323157 323154 17 SQTELPDEK Unmodified 1045.4928 0.49276916 4026 Q99575 POP1 Ribonucleases P/MRP protein subunit POP1 yes yes 0 0 0 By MS/MS 10 0 1 1 20.947 21.285 2 0.034657 22076 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 66.299 37.129 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48839 4026 43798 409618 323158 323158 1 SQTGVGELTTQNTR Unmodified 1490.7325 0.73249893 3733 Q96A65 EXOC4 Exocyst complex component 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 34.45 34.638 2 2.1389E-16 37979 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 120.87 104.99 105020000 0 0 0 6321000 5117900 9402600 6159500 8702500 0 9755800 15572000 11566000 8914500 8455900 15055000 48840 3733 43799 409619;409620;409621;409622;409623;409624;409625;409626;409627;409628;409629 323159;323160;323161;323162;323163;323164;323165;323166;323167 323160 9 SQTIIQSGAVIDCEDK Unmodified 1762.8407 0.84072875 251 O15084 ANKRD28 Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A yes yes 0 0 0 By MS/MS 10 0 1 1 59.146 59.348 2 0.036471 67889 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 53.252 34.984 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48841 251 43800 409630 323168 323168 1 SQTPNNTVTYESER Unmodified 1624.7329 0.73289286 4685 Q9NVW2 RLIM E3 ubiquitin-protein ligase RLIM yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 28.362 28.507 2 0.00034134 30845 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 77.593 51.476 30530000 0 0 0 1829700 2943400 0 2914600 2321700 2151700 3778800 5262900 5845200 0 3481600 0 48842 4685 43801 409631;409632;409633;409634;409635;409636;409637;409638;409639;409640 323169;323170;323171;323172;323173;323174 323170 6 SQTPPGVATPPIPK Unmodified 1388.7664 0.76636524 2558 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.811 60.916 2 0.0026778 68762 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.149 42.504 62363000 0 0 0 3358500 4084800 4010600 4451400 4205300 3372600 6283800 6922300 6994800 5680600 5586900 7411700 48843 2558 43802 409641;409642;409643;409644;409645;409646;409647;409648;409649;409650;409651;409652 323175;323176;323177;323178;323179;323180;323181;323182;323183;323184;323185;323186;323187 323178 13 SQTSSIPQK Unmodified 974.50327 0.50327426 2380 Q14157 UBAP2L Ubiquitin-associated protein 2-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 11.525 11.672 2 0.017052 10642 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 56.014 25.453 80273000 0 0 0 2815000 3472400 11672000 5646100 4094000 12772000 7726200 3677200 5634000 6315300 8274600 8173200 48844 2380 43803 409653;409654;409655;409656;409657;409658;409659;409660;409661;409662;409663;409664 323188;323189;323190;323191;323192;323193 323188 6 SQTSSIPQKPQTNK Unmodified 1542.8002 0.80018457 2380 Q14157 UBAP2L Ubiquitin-associated protein 2-like yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 1 2 2 2 2 2 2 2 2 2 16.201 16.385 2;3 0.0079171 16865 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 51.092 39.478 324160000 0 0 0 17120000 17499000 12988000 22162000 26122000 15653000 26592000 34329000 37638000 33176000 29342000 51539000 48845 2380 43804 409665;409666;409667;409668;409669;409670;409671;409672;409673;409674;409675;409676;409677;409678;409679;409680;409681;409682;409683;409684;409685;409686;409687 323194;323195;323196;323197 323197 1 SQTTYYAQCYR Unmodified 1439.614 0.6139637 4592 Q9NR46 SH3GLB2 Endophilin-B2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 36.11 36.481 2 0.00033356 39907 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 96.331 88.111 39967000 0 0 0 0 0 0 2797800 4313900 0 2872200 4523200 9607100 5435300 4184600 6232800 48846 4592 43805 409688;409689;409690;409691;409692;409693;409694;409695 323198;323199;323200;323201;323202;323203;323204 323204 7 SQTVPSPTINNSGQYSR Unmodified 1834.881 0.88095408 4814 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 46.179 46.415 2 0.00094434 51305 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.555 45.427 29600000 0 0 0 0 3511100 2741100 0 0 3370100 0 0 7853500 0 5050800 7073300 48847 4814 43806 409696;409697;409698;409699;409700;409701;409702;409703;409704 323205;323206;323207;323208;323209;323210;323211;323212 323207 8 SQVDAQLLTVQK Unmodified 1328.73 0.72997974 463 O75150 RNF40 E3 ubiquitin-protein ligase BRE1B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 59.243 58.579 2 0.00015047 66913 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 111.63 80.208 550500000 0 217260000 0 23101000 20659000 19867000 26744000 24900000 23465000 26763000 32544000 30442000 36158000 26079000 42520000 48848 463 43807 409705;409706;409707;409708;409709;409710;409711;409712;409713;409714;409715;409716;409717;409718 323213;323214;323215;323216;323217;323218;323219;323220;323221;323222;323223;323224;323225;323226 323214 12 SQVEDPLPPVFSGTPK Unmodified 1696.8672 0.8672015 2247 Q13164 MAPK7 Mitogen-activated protein kinase 7 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 80.989 80.887 2 0.00075066 93897 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 62.14 53.835 11001000 0 0 0 3222700 0 0 0 0 0 0 0 0 0 0 7778100 48849 2247 43808 409719;409720 323227;323228 323228 2 SQVEPADYK Unmodified 1035.4873 0.48728985 1554 P48739 PITPNB Phosphatidylinositol transfer protein beta isoform yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.799 21.005 2 0.018261 20548 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.982 40.446 107660000 0 0 0 3686000 2719500 13118000 3978300 3857400 3658300 11555000 12294000 13842000 7720200 10272000 20959000 48850 1554 43809 409721;409722;409723;409724;409725;409726;409727;409728;409729;409730;409731;409732 323229;323230;323231;323232;323233;323234 323231 6 SQVFSTAADGQTQVEIK Unmodified 1807.8952 0.89520716 1399 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.17 0.373 10 2 1 10 1 66.056 60.357 2;3 4.0299E-117 77390 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 264.29 246.92 392000000 10117000 377530000 4357300 0 0 0 0 0 0 0 0 0 0 0 0 48851 1399 43810 409733;409734;409735;409736;409737;409738;409739;409740;409741;409742;409743;409744 323235;323236;323237;323238;323239;323240;323241;323242;323243;323244;323245;323246;323247;323248 323237 14 SQVIEGISR Unmodified 987.53491 0.53490874 2988 Q6VY07 PACS1 Phosphofurin acidic cluster sorting protein 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 37.474 37.009 2 0.034565 41166 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 46.462 9.1177 223020000 0 0 0 115700000 107330000 0 0 0 0 0 0 0 0 0 0 48852 2988 43811 409745;409746 323249;323250 323249 2 SQVINEMQK Unmodified 1075.5332 0.53319418 4354 Q9H1Y0 ATG5 Autophagy protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 6 4 2 2 1 1 1 1 28.336 26.007 2 0.034871 28297 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 46.335 17.186 111300000 3878500 100650000 0 0 0 0 0 0 0 0 4638000 0 0 2130900 0 48853 4354 43812 409747;409748;409749;409750 323251;323252 323252 1 SQVISNAK Unmodified 845.46068 0.46068117 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 10.141 6.6438 2 0.018715 8754 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 108.09 56.752 2015500000 146850000 1868600000 0 0 0 0 0 0 0 0 0 0 0 0 0 48854 1337 43813 409751;409752;409753 323253;323254 323254 1 SQVKPDSVTASQPPSK Unmodified 1654.8526 0.85261407 3999 Q96T58 SPEN Msx2-interacting protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.64 2.9 1 1 9 2 1 1 1 1 1 1 1 1 1 24.078 23.499 3 0.00054564 23448 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 51.888 41.072 80505000 0 15677000 0 4318500 5661800 0 5392600 5753600 0 0 8063800 9970200 9778800 8211300 7677700 48855 3999 43814 409754;409755;409756;409757;409758;409759;409760;409761;409762;409763;409764 323255;323256;323257;323258;323259;323260;323261;323262;323263;323264 323260 10 SQVLFHQLVPLQVK Acetyl (Protein N-term) 1676.9614 0.96137665 2977 Q6UVJ0 SASS6 Spindle assembly abnormal protein 6 homolog yes yes 1 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 93.094 93.233 2 3.0946E-08 108330 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 93.345 59.936 22098000 0 0 0 0 0 1520300 0 2493500 1129900 4144000 2628300 0 0 2309000 7872900 48856 2977 43815 409765;409766;409767;409768;409769;409770;409771 323265;323266;323267;323268;323269;323270;323271;323272 323265 8 SQVMDEATALQLR Unmodified 1460.7293 0.72932781 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 70.98 71.046 2 0.00087805 81146 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.652 42.909 46026000 0 0 0 2863800 3783500 3304500 2890100 2654200 0 4523800 4741200 5460600 3786400 4953000 7064800 48857 2501 43816 409772;409773;409774;409775;409776;409777;409778;409779;409780;409781;409782 323273;323274;323275;323276;323277;323278 323275 6 SQVPAAQPTAETK Unmodified 1326.6779 0.67794416 4979 Q9UKY1 ZHX1 Zinc fingers and homeoboxes protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.074 23.28 2 0.003849 23767 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 62.166 52.213 178730000 0 0 0 11083000 10348000 17050000 10740000 11889000 8390800 13449000 16516000 15769000 17337000 14753000 31408000 48858 4979 43817 409783;409784;409785;409786;409787;409788;409789;409790;409791;409792;409793;409794 323279;323280;323281;323282;323283;323284;323285;323286;323287;323288;323289;323290 323288 7 SQVPAAQPTAETKPATAAVPTSQSVK Unmodified 2564.3446 0.34459536 4979 Q9UKY1 ZHX1 Zinc fingers and homeoboxes protein 1 yes yes 0 0 1 By MS/MS By MS/MS By matching 10 0 3 1 1 1 48.861 48.78 3 0.0051388 55484 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 23.74 20.326 20131000 0 0 0 0 7439100 0 7234400 0 0 0 0 0 0 5457600 0 48859 4979 43818 409795;409796;409797 323291 323291 1 SQVQADMLLR Oxidation (M) 1175.5969 0.59685707 5305 yes yes 0 1 0 By MS/MS 10 0 1 1 50.177 49.558 2 0.01969 56690 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 59.245 35.817 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48860 5305 43819 409798 323292 323292 6710 1 SQVQAIGEK Unmodified 958.50836 0.50835964 44;4563 C4AMC7;Q6VEQ5;A8K0Z3;A8MWX3;Q9NQA3 WASH3P;WASH2P;WASH1;WASH4P;WASH6P Putative WAS protein family homolog 3;WAS protein family homolog 2;WAS protein family homolog 1;Putative WAS protein family homolog 4;WAS protein family homolog 6 no no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 17.225 17.394 2 0.020004 17502 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 53.493 16.733 65431000 0 0 0 4760400 4855100 5788000 0 5161400 3606200 7759800 8457600 9340800 7170800 8531200 0 48861 44;4563 43820 409799;409800;409801;409802;409803;409804;409805;409806;409807;409808 323293;323294 323294 2 SQVTSTPISKPPPPLETSLPFLTIPENR Unmodified 3045.6387 0.63865212 2429 Q14678 KANK1 KN motif and ankyrin repeat domain-containing protein 1 yes yes 0 0 1 By MS/MS 10 0 1 1 92.628 92.766 3 0.000158 107488 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 29.934 24.154 2140100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2140100 48862 2429 43821 409809 323295 323295 1 SQVVAGTNYFIK Unmodified 1325.698 0.69795133 772 P04080 CSTB Cystatin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 6 1 3 2 72.685 67.496 2 7.4299E-05 86088 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.343 75.354 8181600000 1276700000 6843500000 61403000 0 0 0 0 0 0 0 0 0 0 0 0 48863 772 43822 409810;409811;409812;409813;409814;409815 323296;323297;323298;323299;323300 323297 3 SQVYSLVPDR Unmodified 1162.5982 0.59823728 1606 P49842 STK19 Serine/threonine-protein kinase 19 yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 56.753 57.068 2 0.040652 64979 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 39.848 23.375 18065000 0 0 0 0 0 0 0 0 0 5570800 0 8368500 4126200 0 0 48864 1606 43823 409816;409817;409818 323301;323302 323301 2 SQWVAPSSVVLHDEGQNEEDVEK Unmodified 2581.1932 0.19323968 5110 Q9Y2L1 DIS3 Exosome complex exonuclease RRP44 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.17 3.85 2 1 3 2 1 1 1 1 72.75 70.937 3 2.7711E-11 89586 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.236 67.398 52278000 0 32382000 4435600 0 0 5156000 0 0 0 0 0 0 0 2779800 7524200 48865 5110 43824 409819;409820;409821;409822;409823;409824 323303;323304;323305;323306;323307;323308 323304 6 SQWYELQQLDSK Acetyl (Protein N-term) 1565.7362 0.73618733 1448 P42224 STAT1 Signal transducer and activator of transcription 1-alpha/beta yes yes 1 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 85.359 85.49 2 4.5695E-06 98837 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.06 97.051 25910000 0 0 0 0 0 3405500 1641900 0 0 0 3968300 3672100 2211900 3661300 7349200 48866 1448 43825 409825;409826;409827;409828;409829;409830;409831 323309;323310;323311 323310 3 SQYEALVETNRR Unmodified 1464.7321 0.732105 87 CON__Q15323;CON__Q9UE12;Q15323 KRT31 Keratin, type I cuticular Ha1 no no 0 0 1 By matching By MS/MS By matching By matching By matching By matching 10 0 6 1 1 1 1 1 1 39.115 39.301 3 0.027 43625 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 29.071 23.756 + 41828000 0 0 0 0 0 5431600 0 21252000 2679400 6965300 0 0 2607600 2892800 0 48867 87 43826 409832;409833;409834;409835;409836;409837 323312 323312 1 SQYEQLAEQNR Unmodified 1364.6321 0.6320566 72 CON__P13645;P13645 KRT10 Keratin, type I cytoskeletal 10 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 2 2 2 2 2 2 2 2 2 2 32.908 32.985 2;3 7.6041E-90 34955 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 208.11 199.65 + 1494500000 0 0 0 366500000 101030000 192670000 102970000 163180000 86151000 143350000 122850000 0 138370000 77402000 0 48868 72 43827 409838;409839;409840;409841;409842;409843;409844;409845;409846;409847;409848;409849;409850;409851;409852;409853;409854;409855;409856;409857 323313;323314;323315;323316;323317;323318;323319;323320;323321;323322;323323;323324;323325;323326;323327;323328;323329;323330 323323 17 SQYEQLAEQNRK Unmodified 1492.727 0.72701962 72 CON__P13645;P13645 KRT10 Keratin, type I cytoskeletal 10 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.52 1.9 3 47 1 1 1 7 5 3 5 4 5 4 3 4 3 2 2 25.735 25.863 2;3 1.5894E-96 27126 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 250.92 239.21 + 134930000000 3126600 2118100 1331000 24690000000 8399000000 11320000000 9846500000 10798000000 6775700000 11616000000 10435000000 16769000000 11407000000 6995300000 5869500000 48869 72 43828 409858;409859;409860;409861;409862;409863;409864;409865;409866;409867;409868;409869;409870;409871;409872;409873;409874;409875;409876;409877;409878;409879;409880;409881;409882;409883;409884;409885;409886;409887;409888;409889;409890;409891;409892;409893;409894;409895;409896;409897;409898;409899;409900;409901;409902;409903;409904;409905;409906;409907 323331;323332;323333;323334;323335;323336;323337;323338;323339;323340;323341;323342;323343;323344;323345;323346;323347;323348;323349;323350;323351;323352;323353;323354;323355;323356;323357;323358;323359;323360;323361;323362;323363;323364;323365;323366;323367;323368;323369;323370;323371;323372;323373;323374;323375;323376;323377;323378;323379;323380;323381;323382;323383;323384;323385;323386;323387;323388;323389;323390;323391;323392;323393;323394;323395;323396;323397;323398;323399 323381 62 SQYHDLQAPDNQQTK Unmodified 1771.8125 0.81254017 4430 Q9H788 SH2D4A SH2 domain-containing protein 4A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.71 3.81 4 2 8 1 4 1 1 1 1 1 1 1 1 1 27.052 25.289 2;3 3.8774E-80 32487 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 213.67 209.15 454800000 13453000 338250000 5172400 0 5753600 8929500 9676500 0 7196100 19912000 11410000 0 0 12554000 22493000 48870 4430 43829 409908;409909;409910;409911;409912;409913;409914;409915;409916;409917;409918;409919;409920;409921 323400;323401;323402;323403;323404;323405;323406;323407;323408;323409;323410;323411 323403 12 SQYLQLGPSR Unmodified 1147.5986 0.59857163 2976 Q6UUV9 CRTC1 CREB-regulated transcription coactivator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 52.07 52.294 2 0.0058693 58941 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 81.525 61.291 86230000 0 0 0 0 6441900 6230500 8348600 6524300 0 8506600 11170000 9129400 7188900 8200200 14489000 48871 2976 43830 409922;409923;409924;409925;409926;409927;409928;409929;409930;409931;409932 323412;323413;323414;323415;323416;323417;323418;323419 323414 8 SQYPNQPTR Unmodified 1089.5203 0.52032131 1173 P24468 NR2F2 COUP transcription factor 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 14.885 15.12 2 0.01656 14225 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 56.434 32.479 66097000 0 0 0 5682700 0 0 6332400 3265800 0 6031200 10138000 8897500 10137000 8014400 7597900 48872 1173 43831 409933;409934;409935;409936;409937;409938;409939;409940;409941 323420;323421;323422;323423;323424 323422 5 SQYSGQLHEVR Unmodified 1302.6317 0.63166267 4223 Q9BXB5 OSBPL10 Oxysterol-binding protein-related protein 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.067 24.271 3 0.0041786 25815 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 56.225 47.712 94810000 0 0 0 3437400 5686000 7707200 6735000 6748100 5888800 8213300 9757900 11955000 6707900 8628300 13345000 48873 4223 43832 409942;409943;409944;409945;409946;409947;409948;409949;409950;409951;409952;409953 323425;323426;323427;323428;323429;323430;323431;323432;323433 323432 8 SQYSLTRAQQSYK Unmodified 1558.774 0.77396981 3122 Q7Z7E8 UBE2Q1 Ubiquitin-conjugating enzyme E2 Q1 yes yes 0 0 1 By MS/MS 2 0 1 1 40.03 33.407 3 0.043387 46203 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 27.969 15.343 18250000 18250000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48874 3122 43833 409954 323434 323434 1 SRADLTAEMISAPLGDFR Oxidation (M) 1964.9626 0.96257522 4383 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 yes yes 0 1 1 By MS/MS By MS/MS 10 0 2 1 1 77.773 77.967 3 0.00065261 90160 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 45.347 35.767 18998000 0 0 0 0 0 0 0 0 0 0 9715900 9282500 0 0 0 48875 4383 43834 409955;409956 323435;323436 323436 5838 2 SRAEAALEEESR Unmodified 1346.6426 0.64262129 3714 Q969G3 SMARCE1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 1 2 2 2 2 2 2 2 2 2 21.821 22.036 2;3 0.013669 21622 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.552 22.688 181340000 0 0 0 10353000 11335000 5188500 17569000 11527000 12975000 15537000 18537000 25526000 13612000 15821000 23361000 48876 3714 43835 409957;409958;409959;409960;409961;409962;409963;409964;409965;409966;409967;409968;409969;409970;409971;409972;409973;409974;409975;409976;409977;409978;409979 323437;323438;323439;323440 323438 2 SRAEAALEEESRQR Unmodified 1630.8023 0.80230983 3714 Q969G3 SMARCE1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 yes yes 0 0 2 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 2 24.866 24.632 3;4 0.0051919 26572 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.03 31.426 132670000 27042000 0 0 8055500 0 9613800 10044000 0 0 14225000 3268800 7987300 5081900 4312500 43043000 48877 3714 43836 409980;409981;409982;409983;409984;409985;409986;409987;409988;409989;409990;409991 323441;323442;323443;323444;323445 323441 4 SRAEAESMYQIK Oxidation (M) 1427.6715 0.67147858 67 CON__P05787;P05787 KRT8 Keratin, type II cytoskeletal 8 yes no 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 1 1 2 22.8 23.041 3 1.4323E-05 24646 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 90.697 74.807 + 823460000 0 0 0 42658000 51291000 54639000 55469000 52255000 43966000 73830000 69823000 117140000 98582000 60917000 102890000 48878 67 43837 409992;409993;409994;409995;409996;409997;409998;409999;410000;410001;410002;410003;410004 323446;323447;323448;323449;323450;323451;323452;323453;323454;323455;323456;323457;323458;323459;323460;323461;323462;323463;323464;323465;323466;323467 323449 75 22 SRAEAESMYQIK Unmodified 1411.6766 0.67656396 67 CON__P05787;P05787 KRT8 Keratin, type II cytoskeletal 8 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.7 1.51 1 26 1 2 1 2 2 2 2 2 2 3 3 3 2 35.118 35.216 2;3 8.2873E-07 37977 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 128.01 103.16 + 4258500000 0 0 10235000 249350000 187600000 317740000 272240000 241330000 230630000 395400000 394330000 619670000 393990000 402890000 543050000 48879 67 43837 410005;410006;410007;410008;410009;410010;410011;410012;410013;410014;410015;410016;410017;410018;410019;410020;410021;410022;410023;410024;410025;410026;410027;410028;410029;410030;410031 323468;323469;323470;323471;323472;323473;323474;323475;323476;323477;323478;323479;323480;323481;323482;323483;323484;323485;323486;323487;323488;323489;323490;323491;323492;323493;323494;323495;323496;323497;323498;323499;323500;323501;323502;323503 323499 33 SRAEAESWYQTK Unmodified 1454.679 0.6790068 66;58;779;80;53;105 P04259;CON__P50446;CON__Q8BGZ7;CON__O95678;O95678;CON__P02538;P02538;CON__P04259 KRT6B;KRT75;KRT6A Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 6A no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 1 2 2 2 2 2 2 32.143 32.332 2;3 3.2031E-05 35348 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 127.87 91.924 + 1871300000 0 0 0 333360000 42693000 62860000 88374000 227230000 10329000 101020000 80401000 175670000 654940000 47345000 47109000 48880 779;80;105;53;58;66 43838 410032;410033;410034;410035;410036;410037;410038;410039;410040;410041;410042;410043;410044;410045;410046;410047;410048;410049;410050;410051;410052;410053;410054 323504;323505;323506;323507;323508;323509;323510;323511;323512;323513;323514;323515;323516;323517;323518;323519;323520;323521;323522 323509 14 SRAPLSSSSSSASSITSPSSNVTTPNSQR Unmodified 2879.3857 0.38568491 2970 Q6T4R5 NHS Nance-Horan syndrome protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 46.742 46.973 3 3.0312E-37 52705 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 89.659 77.715 60616000 0 0 0 0 5051800 5629300 4215100 0 4000400 8734600 7942500 7806000 0 5496500 11740000 48881 2970 43839 410055;410056;410057;410058;410059;410060;410061;410062;410063 323523;323524;323525;323526;323527;323528;323529;323530;323531;323532 323528 10 SRATGASAAEMIETK Oxidation (M) 1537.7406 0.74062078 3645 Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A yes yes 0 1 1 By MS/MS 2 0 1 1 28.859 23.341 2 0.030009 32940 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.64 49.627 4277900 4277900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48882 3645 43840 410064 323533 323533 1 SRATGASAAEMIETK Unmodified 1521.7457 0.74570615 3645 Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 43.012 37.746 3 0.0011306 47654 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 64.565 35.553 74949000 72244000 0 2705100 0 0 0 0 0 0 0 0 0 0 0 0 48883 3645 43840 410065;410066 323534;323535 323535 2 SRAVELLPDGTANLAK Unmodified 1653.905 0.90498399 434 O60826 CCDC22 Coiled-coil domain-containing protein 22 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.7 3.52 2 1 7 2 1 1 1 1 1 1 1 1 68.536 67.003 3 0.0023287 83884 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 55.011 34.487 192210000 142680000 0 10770000 2501400 0 5334700 0 5707900 3475200 7510800 0 0 4874600 0 9359200 48884 434 43841 410067;410068;410069;410070;410071;410072;410073;410074;410075;410076 323536;323537;323538;323539;323540;323541 323540 5 SRDATPPVSPINMEDQER Unmodified 2040.9535 0.9534671 1052 P17275 JUNB Transcription factor jun-B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 55.527 55.603 3 0.00037752 62371 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.814 46.086 43880000 0 0 0 2554100 3738800 4255300 3539700 2972500 3027600 0 4579700 0 3885800 4795200 10531000 48885 1052 43842 410077;410078;410079;410080;410081;410082;410083;410084;410085;410086;410087 323542;323543;323544;323545;323546;323547;323548;323549;323550;323551 323544 9 SRDATPPVSPINMEDQER Oxidation (M) 2056.9484 0.94838172 1052 P17275 JUNB Transcription factor jun-B yes yes 0 1 1 By matching By matching By MS/MS By matching 10 0 4 1 1 1 1 41.451 41.705 3 0.0001522 46258 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 54.974 44.777 19258000 0 0 0 0 0 4182600 0 2675200 0 0 7334200 0 5066400 0 0 48886 1052 43842 410088;410089;410090;410091 323552 323552 1469 1 SRDEGYQYHR Unmodified 1309.58 0.57996145 2063 Q01804 OTUD4 OTU domain-containing protein 4 yes yes 0 0 1 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 9.2298 9.3536 3 0.039011 7076 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 28.956 22.326 15054000 0 0 0 970360 859730 0 1097800 1314700 0 769010 0 3647200 2573400 1746100 2076100 48887 2063 43843 410092;410093;410094;410095;410096;410097;410098;410099;410100 323553 323553 1 SRDFNEECPR Unmodified 1308.5517 0.55169779 2284 Q13418 ILK Integrin-linked protein kinase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.503 16.681 3 0.027523 16618 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 55.353 53.213 113930000 0 0 0 5833200 5874800 10109000 6124300 5528000 5003800 9910400 9234000 14427000 10244000 12556000 19083000 48888 2284 43844 410101;410102;410103;410104;410105;410106;410107;410108;410109;410110;410111;410112 323554;323555 323554 0 SRDLEQQLQDELLEVVSELQTAK Unmodified 2670.3712 0.37120404 2023 P98171 ARHGAP4 Rho GTPase-activating protein 4 yes yes 0 0 1 By MS/MS 2 0 1 1 104.08 95.946 3 7.4837E-11 123260 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.889 70.456 5546600 5546600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48889 2023 43845 410113 323556 323556 1 SRDLLVQQASQCLSK Unmodified 1731.8938 0.89376737 2645 Q1KMD3 HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 56.949 57.348 3 0.04744 64429 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 16.173 2.755 84731000 0 0 0 0 0 0 0 0 0 0 12231000 24681000 21994000 10983000 14842000 48890 2645 43846 410114;410115;410116;410117;410118 323557 323557 1 SRDSGDENEPIQER Unmodified 1630.7183 0.71830543 3581 Q8WX93 PALLD Palladin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.717 14.884 3 0.00035195 14450 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 68.044 61.005 171110000 0 0 0 11553000 5721800 9645600 10998000 8043700 10170000 14640000 16952000 15054000 13434000 14155000 40739000 48891 3581 43847 410119;410120;410121;410122;410123;410124;410125;410126;410127;410128;410129;410130 323558;323559;323560;323561;323562;323563;323564;323565;323566;323567;323568;323569 323568 12 SRDSLAPGPEPQDEDQK Unmodified 1867.8548 0.85479891 239 O15013 ARHGEF10 Rho guanine nucleotide exchange factor 10 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.299 28.493 3 0.00069882 30383 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 51.495 34.007 57811000 0 0 0 3442400 3056200 5130300 3827300 3855600 4355200 4430900 5841500 6659600 5729000 3564500 7918400 48892 239 43848 410131;410132;410133;410134;410135;410136;410137;410138;410139;410140;410141;410142 323570;323571;323572;323573;323574;323575;323576;323577;323578;323579;323580;323581 323575 12 SRDVPVDAVATEAATIDR Unmodified 1884.9541 0.95411902 2769 Q5T1V6 DDX59 Probable ATP-dependent RNA helicase DDX59 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.812 69.889 3 0.0001269 80302 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 60.528 55.1 78733000 0 0 0 4170600 3633900 8295100 3435400 5052800 4850900 5831300 8315900 10997000 4486800 6209300 13454000 48893 2769 43849 410143;410144;410145;410146;410147;410148;410149;410150;410151;410152;410153;410154 323582;323583;323584;323585;323586;323587;323588;323589;323590;323591;323592;323593;323594;323595;323596;323597 323582 16 SREAESMATHHLP Unmodified 1464.678 0.67796094 4618 Q9NS73 MBIP MAP3K12-binding inhibitory protein 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 30.893 30.991 3 0.0087143 32725 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.314 47.948 47306000 0 0 0 0 5413500 7628100 3061700 0 0 8486900 0 22716000 0 0 0 48894 4618 43850 410155;410156;410157;410158;410159 323598 323598 0 SREDEDALEQAR Unmodified 1417.6433 0.64334957 441 O60885 BRD4 Bromodomain-containing protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 22.394 22.557 3 0.013619 23425 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 33.685 26.804 77544000 0 0 0 3948000 3257500 5395700 4278100 4788000 4811700 5323600 9374100 0 9605000 9878200 16884000 48895 441 43851 410160;410161;410162;410163;410164;410165;410166;410167;410168;410169;410170 323599;323600;323601;323602;323603;323604;323605 323600 7 SREDLSALTR Unmodified 1146.5993 0.59929991 616 O95049 TJP3 Tight junction protein ZO-3 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 36.029 36.036 3 0.015341 39662 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 45.879 34.715 42859000 0 0 0 7259700 5759600 0 6871700 4015400 4976300 7011500 6965200 0 0 0 0 48896 616 43852 410171;410172;410173;410174;410175;410176;410177 323606;323607;323608;323609 323606 4 SREDLSAQPVQTK Unmodified 1457.7474 0.74742071 2136 Q07157 TJP1 Tight junction protein ZO-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.744 22.95 3 0.00065224 24354 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 49.62 42.601 170600000 0 0 0 15324000 12990000 13264000 11133000 8490100 11775000 16666000 20180000 16188000 13920000 15352000 15315000 48897 2136 43853 410178;410179;410180;410181;410182;410183;410184;410185;410186;410187;410188;410189 323610;323611;323612;323613;323614;323615;323616;323617;323618;323619 323618 8 SREESADAPVDQNSVVIPAAAK Unmodified 2253.1237 0.12370355 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 2 56.987 57.181 3 9.2902E-07 65326 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 34.65 28.771 23172000 0 0 0 0 0 0 0 6540700 0 0 0 0 6645100 9986000 0 48898 2193 43854 410190;410191;410192;410193;410194;410195;410196 323620;323621;323622;323623;323624;323625;323626 323625 6 SREESTIAHQEDSK Unmodified 1615.7438 0.7437919 3075 Q7Z2Z1 TICRR Treslin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 7.7452 7.69 3 0.00017594 5469 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 79.81 64.423 49212000 0 0 2520700 1062300 1299800 2708700 1654300 2029000 2224700 4274400 10995000 6327500 4824200 4369100 4922000 48899 3075 43855 410197;410198;410199;410200;410201;410202;410203;410204;410205;410206;410207;410208;410209 323627;323628;323629;323630;323631;323632;323633;323634;323635;323636;323637 323628 11 SREIFLSQPILLELEAPLK Unmodified 2195.2566 0.25655562 1873;1872;1381 P62140;P62136;P36873 PPP1CB;PPP1CA;PPP1CC Serine/threonine-protein phosphatase PP1-beta catalytic subunit;Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit no no 0 0 1 By MS/MS 3 0 1 1 98.354 95.003 3 4.1433E-06 113974 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 55.763 52.839 4986900 0 4986900 0 0 0 0 0 0 0 0 0 0 0 0 0 48900 1873;1872;1381 43856 410210 323638 323638 1 SREMQDVDLAEVK Acetyl (Protein N-term);Oxidation (M) 1576.7403 0.74028643 3632 Q92597 NDRG1 Protein NDRG1 yes yes 1 1 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 55.018 48.738 2 0.00046033 63154 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.062 42.684 74981000 3848200 71132000 0 0 0 0 0 0 0 0 0 0 0 0 0 48901 3632 43857 410211;410212;410213 323639;323640;323641 323639 5131 3 SREMQDVDLAEVK Acetyl (Protein N-term) 1560.7454 0.7453718 3632 Q92597 NDRG1 Protein NDRG1 yes yes 1 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 70.486 64.247 2 7.0101E-41 82614 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 188.91 150.82 187840000 6332200 181500000 0 0 0 0 0 0 0 0 0 0 0 0 0 48902 3632 43857 410214;410215;410216 323642;323643;323644;323645;323646 323643 5 SREMQDVDLAEVKPLVEK Acetyl (Protein N-term);Oxidation (M) 2143.0831 0.083084288 3632 Q92597 NDRG1 Protein NDRG1 yes yes 1 1 2 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 76.712 73.04 3 3.2378E-48 88997 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 138.97 128.6 112070000 0 96718000 15348000 0 0 0 0 0 0 0 0 0 0 0 0 48903 3632 43858 410217;410218;410219 323647;323648;323649;323650;323651 323650 5131 5 SREMQDVDLAEVKPLVEK Acetyl (Protein N-term) 2127.0882 0.088169665 3632 Q92597 NDRG1 Protein NDRG1 yes yes 1 0 2 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 82.8 77.674 3 1.1484E-53 95507 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 125.18 115.61 248620000 35373000 202520000 10722000 0 0 0 0 0 0 0 0 0 0 0 0 48904 3632 43858 410220;410221;410222 323652;323653;323654 323654 2 SRENPEEDEDQRNPAK Unmodified 1912.8511 0.85111052 1360 P35610 SOAT1 Sterol O-acyltransferase 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 9.5722 9.7047 3 0.00044879 5936 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 67.416 56.782 41061000 0 0 0 1744000 2407800 3310400 3043400 2256400 2354300 2828100 8779700 6599600 2525600 1766000 3445300 48905 1360 43859 410223;410224;410225;410226;410227;410228;410229;410230;410231;410232;410233;410234 323655;323656 323655 1 SREPTGVEENK Unmodified 1244.5997 0.59969384 3111 Q7Z6E9 RBBP6 E3 ubiquitin-protein ligase RBBP6 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 7.9029 8.0114 3 0.0026128 6467 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 52.693 37.681 26231000 0 0 0 0 3545600 0 0 0 7056800 0 0 7995400 7633400 0 0 48906 3111 43860 410235;410236;410237;410238 323657;323658;323659;323660 323660 4 SREQILDQLK Unmodified 1228.6776 0.67755023 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 47.941 48.103 2;3 0.0038995 54122 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 53.028 13.88 256540000 0 0 0 8862900 10143000 16737000 17896000 20243000 18527000 22867000 28011000 31128000 27091000 23019000 32014000 48907 3023 43861 410239;410240;410241;410242;410243;410244;410245;410246;410247;410248;410249;410250;410251;410252;410253;410254;410255;410256;410257;410258;410259;410260;410261;410262 323661;323662;323663;323664;323665;323666;323667;323668;323669;323670 323668 10 SREQMINDR Oxidation (M) 1163.5353 0.53531945 3462 Q8NHZ8 CDC26 Anaphase-promoting complex subunit CDC26 yes yes 0 1 1 By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 6.3764 6.5057 3 0.012595 4330 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 45.598 29.461 46310000 0 0 0 3219000 0 2476300 3001600 2718800 0 3969200 5010400 10114000 6566400 0 9234500 48908 3462 43862 410263;410264;410265;410266;410267;410268;410269;410270;410271 323671 323671 4992 1 SREQMSSQPK Unmodified 1176.5557 0.55572054 2875 Q6FI81 CIAPIN1 Anamorsin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 6.5555 3.5913 2 3.714E-05 6453 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 128.27 108.49 375830000 280270000 44437000 51124000 0 0 0 0 0 0 0 0 0 0 0 0 48909 2875 43863 410272;410273;410274 323672;323673;323674;323675 323673 4 SREQSSEAAETGVSENEENPVR Unmodified 2404.0739 0.073852823 2647 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.3 32.486 3 1.2266E-80 35663 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 147.41 139.42 205490000 0 0 0 8309200 9611200 15185000 13392000 16623000 12569000 19466000 22906000 26879000 23090000 15450000 22012000 48910 2647 43864 410275;410276;410277;410278;410279;410280;410281;410282;410283;410284;410285;410286 323676;323677;323678;323679;323680;323681;323682;323683;323684;323685;323686;323687;323688;323689 323677 14 SREVIDSIIK Unmodified 1158.6608 0.66083754 1456 P42357 HAL Histidine ammonia-lyase yes yes 0 0 1 By MS/MS 10 0 1 1 54.653 53.996 3 0.0012657 62066 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 83.045 36.226 40143000 0 0 0 40143000 0 0 0 0 0 0 0 0 0 0 0 48911 1456 43865 410287 323690;323691;323692 323691 3 SRFTPELQPK Unmodified 1201.6455 0.64552182 2427 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.775 38.955 3 0.014806 42379 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 41.338 32.864 117970000 0 0 0 5192800 5813000 8185100 8545100 5448900 6504700 8298600 14784000 14958000 10513000 10385000 19343000 48912 2427 43866 410288;410289;410290;410291;410292;410293;410294;410295;410296;410297;410298;410299 323693 323693 1 SRFVQDLSK Acetyl (Protein N-term) 1120.5877 0.58767259 2638 Q16851 UGP2 UTP--glucose-1-phosphate uridylyltransferase yes yes 1 0 1 By MS/MS By MS/MS 2 0 2 1 1 69.417 63.427 2 0.0032408 84370 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 108.43 40.415 85321000 78845000 0 6476600 0 0 0 0 0 0 0 0 0 0 0 0 48913 2638 43867 410300;410301 323694;323695 323694 2 SRGAGSAQPEPQHFQPK Unmodified 1820.8918 0.89179354 378 O43896 KIF1C Kinesin-like protein KIF1C yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 21.742 21.897 4 0.016907 22783 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 35.473 20.682 32385000 0 0 0 5386200 0 0 7259100 0 5075800 5931500 0 8732200 0 0 0 48914 378 43868 410302;410303;410304;410305;410306 323696 323696 0 SRGCAVVEFK Unmodified 1151.5757 0.5757277 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 2 6 2 1 1 1 1 1 1 34.487 33.072 3 0.011003 48468 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.471 42.424 463710000 267760000 0 0 0 0 0 9252400 0 18635000 22893000 0 62812000 31635000 0 50727000 48915 1681 43869 410307;410308;410309;410310;410311;410312;410313;410314 323697;323698;323699;323700;323701;323702;323703;323704;323705 323702 5 SRGEEQGCQGDGDAGVK Unmodified 1748.7384 0.73838894 2340 Q13671 RIN1 Ras and Rab interactor 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.081 7.2004 3 3.0135E-14 4124 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 85.636 79.732 105010000 0 0 0 5247400 5425900 8101300 6420600 7547600 0 12736000 17080000 11358000 10128000 9707200 11254000 48916 2340 43870 410315;410316;410317;410318;410319;410320;410321;410322;410323;410324;410325;410326 323706;323707;323708;323709;323710;323711;323712;323713;323714;323715;323716 323712 11 SRGEGPEAEFQSLTPSQIK Unmodified 2060.0174 0.017447563 4389 Q9H425 C1orf198 Uncharacterized protein C1orf198 yes yes 0 0 1 By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 71.298 71.485 3 0.027121 81600 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 30.659 26.94 32419000 0 0 0 0 0 4627500 0 3341200 0 5325200 4718400 0 0 3927700 10479000 48917 4389 43871 410327;410328;410329;410330;410331;410332 323717 323717 0 SRGEQEGDEEEEGHIVDAEAEEGDADASDAK Unmodified 3273.3301 0.33013968 671 O95602 POLR1A DNA-directed RNA polymerase I subunit RPA1 yes yes 0 0 1 By MS/MS 2 0 1 1 48.602 40.853 4 9.5927E-07 56672 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.149 44.243 3748600 3748600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48918 671 43872 410333 323718 323718 1 SRGFAFVTFESPADAK Unmodified 1728.8471 0.84713476 1395 P38159;Q96E39;O75526;Q8N7X1 RBMX;RBMXL1;RBMXL2;RBMXL3 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1;RNA-binding motif protein, X-linked-like-2;RNA-binding motif protein, X-linked-like-3 yes no 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 78.239 78.359 3 0.011149 90324 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 24.043 20.318 7585300 0 0 0 0 0 0 3598300 0 0 0 0 0 3987000 0 0 48919 1395 43873 410334;410335 323719;323720 323719 2 SRGFSNEVSSK Unmodified 1196.5786 0.57856447 4327 Q9H0G5 NSRP1 Nuclear speckle splicing regulatory protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.6 1.74 1 19 1 1 1 1 1 2 1 2 2 2 2 2 2 14.196 14.16 2;3 2.1641E-07 21384 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 116.03 101.82 342220000 185760000 0 0 9019400 9323200 10094000 9875600 8703400 9019500 15933000 27377000 18890000 3097200 14846000 20287000 48920 4327 43874 410336;410337;410338;410339;410340;410341;410342;410343;410344;410345;410346;410347;410348;410349;410350;410351;410352;410353;410354;410355 323721;323722;323723;323724;323725;323726;323727;323728;323729;323730;323731;323732;323733 323726 10 SRGGGEGNVDETGNNPSVSLK Unmodified 2072.9723 0.97228828 1498 P46100 ATRX Transcriptional regulator ATRX yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 34.469 34.603 3 7.5358E-06 37448 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 54.559 46.065 111630000 0 0 0 6376900 4076400 16376000 5799100 5608900 5407900 9392400 17999000 15387000 15872000 9338100 0 48921 1498 43875 410356;410357;410358;410359;410360;410361;410362;410363;410364;410365;410366 323734;323735;323736;323737;323738;323739;323740;323741;323742;323743 323742 10 SRGPATVEDLPSAFEEK Unmodified 1831.8952 0.89520716 226 O14908 GIPC1 PDZ domain-containing protein GIPC1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 68.605 68.73 3 0.0088526 78036 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 32.858 27.803 66255000 0 0 0 4017000 0 7685300 0 3725700 0 5992100 5097700 11205000 3869700 6317200 18345000 48922 226 43876 410367;410368;410369;410370;410371;410372;410373;410374;410375 323744 323744 1 SRGSDSPAADVEIEYVTEEPEIYEPNFIFFK Unmodified 3577.6777 0.67767598 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 0 1 By MS/MS 2 0 1 1 98.79 90.66 3 8.8302E-51 116947 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 105.9 101.23 13692000 13692000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48923 2290 43877 410376 323745 323745 1 SRGSGEQDWVNRPK Unmodified 1614.7863 0.78626584 3108 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.58 1.79 1 18 1 2 1 1 2 1 2 2 1 1 2 2 1 22.04 21.921 3;4 5.9339E-11 21082 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 102.5 91.4 436660000 26211000 0 0 21129000 8813000 18641000 43500000 22280000 34000000 52222000 44828000 32325000 72839000 29339000 30534000 48924 3108 43878 410377;410378;410379;410380;410381;410382;410383;410384;410385;410386;410387;410388;410389;410390;410391;410392;410393;410394;410395 323746;323747;323748;323749;323750;323751;323752;323753;323754 323748 6 SRGSGGLGGACGGAGFGSR Unmodified 1666.7594 0.75939916 66;58;779 P04259;CON__P02538;P02538;CON__P04259 KRT6B;KRT6A Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 6A no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 31.18 31.323 3 0.00010288 34611 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 62.739 62.739 + 389910000 0 0 0 135760000 23146000 9936100 15380000 25493000 13432000 30213000 13016000 21343000 90117000 12069000 0 48925 779;58;66 43879 410396;410397;410398;410399;410400;410401;410402;410403;410404;410405;410406 323755 323755 0 SRGVDLHEQSQQNK Unmodified 1624.7917 0.79174514 1829 P61020 RAB5B Ras-related protein Rab-5B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 2 16 2 1 1 1 1 2 1 1 2 2 1 1 2 11.167 10.871 2;3;4 5.3838E-21 9679 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 132.97 116.19 236220000 39062000 0 0 13223000 5830500 10318000 7991800 8503300 10531000 15110000 31621000 31056000 16983000 15014000 30978000 48926 1829 43880 410407;410408;410409;410410;410411;410412;410413;410414;410415;410416;410417;410418;410419;410420;410421;410422;410423;410424 323756;323757;323758;323759;323760;323761;323762;323763;323764;323765;323766;323767;323768;323769 323762 11 SRGVGGAVPGAVLEPVAR Unmodified 1690.9479 0.94785186 5182 Q9Y446 PKP3 Plakophilin-3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.518 64.607 3 0.030012 73113 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 16.8 7.9805 69266000 0 0 0 3791900 3018200 3628700 5886800 7451800 4560200 7750200 7939700 8247200 1942700 4479900 10569000 48927 5182 43881 410425;410426;410427;410428;410429;410430;410431;410432;410433;410434;410435;410436 323770 323770 1 SRHLVAAATAQR Unmodified 1279.7109 0.71091605 3080 Q7Z3B3 KANSL1 KAT8 regulatory NSL complex subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 5.5356 5.653 3 0.019015 2910 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 29.807 21.294 375650000 0 0 0 34608000 38804000 42183000 25465000 40110000 17354000 13629000 25568000 28744000 34643000 20773000 53765000 48928 3080 43882 410437;410438;410439;410440;410441;410442;410443;410444;410445;410446;410447;410448 323771;323772;323773 323771 3 SRIESLTR Acetyl (Protein N-term) 1002.5458 0.54580778 3693 Q92974 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 41.354 41.577 2 0.020223 46342 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 68.371 27.868 118220000 0 0 0 8138800 0 8062200 16452000 12391000 12178000 11610000 14576000 18395000 0 0 16414000 48929 3693 43883 410449;410450;410451;410452;410453;410454;410455;410456;410457 323774;323775;323776;323777;323778;323779;323780 323776 3 SRLDQELK Unmodified 987.53491 0.53490874 1511 P46781 RPS9 40S ribosomal protein S9 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22.695 22.004 2 0.015282 22005 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 131.22 61.224 2697500000 502100000 17051000 3084900 93587000 100080000 134930000 108890000 155990000 108980000 216180000 238080000 288130000 346060000 205680000 178720000 48930 1511 43884 410458;410459;410460;410461;410462;410463;410464;410465;410466;410467;410468;410469;410470;410471;410472 323781;323782;323783;323784 323784 1 SRLEELDESYIEK Unmodified 1609.7835 0.78353145 3963 Q96QU8 XPO6 Exportin-6 yes yes 0 0 1 By MS/MS 2 0 1 1 62.836 59.073 3 0.012777 73486 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 39.509 22.308 3297500 0 0 3297500 0 0 0 0 0 0 0 0 0 0 0 0 48931 3963 43885 410473 323785 323785 1 SRLGDLYEEEMR Unmodified 1496.6929 0.6929423 870 P08670 VIM Vimentin yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 1 1 1 1 2 1 2 59.754 59.903 2;3 0.0018012 68212 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 50.897 38.064 253330000 0 0 0 3432900 2549100 21929000 5008800 12422000 9920900 15295000 12462000 24665000 23960000 19820000 101860000 48932 870 43886 410474;410475;410476;410477;410478;410479;410480;410481;410482;410483;410484;410485;410486;410487 323786;323787;323788;323789;323790;323791;323792;323793 323793 4 SRLGDLYEEEMR Oxidation (M) 1512.6879 0.68785692 870 P08670 VIM Vimentin yes yes 0 1 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 2 1 1 1 1 1 1 2 1 1 1 47.334 47.484 3 0.0019252 53804 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 53.754 43.8 624160000 0 0 0 51832000 27643000 46319000 34939000 0 46899000 47091000 53736000 125210000 76803000 43157000 70537000 48933 870 43886 410488;410489;410490;410491;410492;410493;410494;410495;410496;410497;410498;410499;410500 323794;323795;323796;323797;323798;323799;323800 323796 1117 1 SRLMGLEALK Unmodified 1116.6325 0.6325143 1548 P48643 CCT5 T-complex protein 1 subunit epsilon yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 59.365 59.617 2 0.03666 66969 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.943 54.496 77262000 0 0 0 0 0 4358600 2710500 4297400 3222900 7109800 6200700 10848000 3815900 7109700 27588000 48934 1548 43887 410501;410502;410503;410504;410505;410506;410507;410508;410509;410510 323801 323801 0 SRLSESQEK Unmodified 1062.5306 0.53055165 1517 P46939 UTRN Utrophin yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 6.2599 3.4413 2 0.034335 6365 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 108.15 60.489 63417000 59991000 0 3425900 0 0 0 0 0 0 0 0 0 0 0 0 48935 1517 43888 410511;410512 323802 323802 1 SRLSSSSSNDSGNK Unmodified 1424.6492 0.64916323 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 1 By MS/MS 2 0 1 1 5.724 2.3465 2 2.5306E-51 5235 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 187.45 161.83 78677000 78677000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48936 2172 43889 410513 323803 323803 1 SRLTSAGQSHR Unmodified 1198.6167 0.61668131 3134 Q86TC9 MYPN Myopalladin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 5.8306 5.948 3 0.0033758 2825 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 47.712 28.967 75099000 0 0 0 5464300 3212100 5068100 7492000 4318100 6305900 6627500 6091900 7262900 3947300 7086500 12222000 48937 3134 43890 410514;410515;410516;410517;410518;410519;410520;410521;410522;410523;410524;410525 323804;323805;323806;323807;323808 323807 5 SRMEASYLADK Unmodified 1269.6023 0.60233638 3780 Q96CN9 GCC1 GRIP and coiled-coil domain-containing protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 39.539 32.916 2 0.033212 45727 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.781 36.59 8287100 8287100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48938 3780 43891 410526 323809 323809 1 SRMLESLSCECEAIK Unmodified 1811.8216 0.82158999 3806 Q96EA4 SPDL1 Protein Spindly yes yes 0 0 1 By MS/MS 2 0 1 1 70.735 62.468 2 0.0093825 83252 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.01 34.632 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48939 3806 43892 410527 323810 323810 1 SRMQLAAESLQEADK Oxidation (M) 1691.8148 0.81484835 2005 P83436 COG7 Conserved oligomeric Golgi complex subunit 7 yes yes 0 1 1 By MS/MS 2 0 1 1 44.597 37.732 3 0.00027172 51748 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.583 59.751 82097000 82097000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48940 2005 43893 410528 323811 323811 3255 1 SRMQLAAESLQEADK Unmodified 1675.8199 0.81993373 2005 P83436 COG7 Conserved oligomeric Golgi complex subunit 7 yes yes 0 0 1 By MS/MS 2 0 2 2 61.739 53.483 2;3 1.4069E-55 72483 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 202.25 146.15 114300000 114300000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48941 2005 43893 410529;410530 323812;323813 323813 2 SRNPVASPTQPSGTEK Unmodified 1654.8275 0.82746195 330 O43435 TBX1 T-box transcription factor TBX1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 19.55 19.629 3 0.0060597 19987 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 37.583 23.956 48125000 0 0 0 5310100 4916700 6063400 5317700 5522100 6607700 6410900 0 0 0 0 7976700 48942 330 43894 410531;410532;410533;410534;410535;410536;410537;410538 323814;323815 323815 2 SRNTDEMVELR Unmodified 1348.6405 0.6405128 1868 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 36.42 36.558 3 0.004383 39633 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 47.915 30.547 58614000 0 0 0 3339900 3359800 3401000 0 2560900 3647400 8125600 6001700 14321000 7334600 6522900 0 48943 1868 43895 410539;410540;410541;410542;410543;410544;410545;410546;410547;410548 323816;323817;323818;323819;323820;323821;323822;323823;323824 323822 9 SRNVVIAADGVLK Unmodified 1340.7776 0.77759863 4745 Q9NYL2 ZAK Mitogen-activated protein kinase kinase kinase MLT yes yes 0 0 1 By MS/MS 2 0 1 1 67.691 59.397 3 0.047541 79628 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 35.35 21.32 18015000 18015000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48944 4745 43896 410549 323825 323825 0 SRPELLEYYIK Unmodified 1409.7555 0.7554662 2401 Q14258 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes yes 0 0 1 By MS/MS 2 0 2 2 82.842 74.712 2;3 0.016875 97880 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.04 45.261 41823000 41823000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48945 2401 43897 410550;410551 323826;323827 323827 1 SRPEPSYHSR Unmodified 1214.5792 0.57923317 2750 Q5PRF9 SAMD4B Protein Smaug homolog 2 yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 7.0129 7.1589 3 0.016254 5079 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 63.408 53.976 126550000 0 0 0 6239100 5325000 0 0 0 13004000 14978000 25354000 12417000 14882000 13787000 20567000 48946 2750 43898 410552;410553;410554;410555;410556;410557;410558;410559;410560 323828;323829;323830;323831;323832 323832 0 SRPGPSLQIQDLK Unmodified 1437.794 0.79397698 602 O94913 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 57.756 57.241 3 0.00071774 64059 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 65.495 58.367 170330000 16116000 0 0 0 9366500 14673000 8344500 11659000 12343000 11893000 15137000 19233000 16863000 12342000 22362000 48947 602 43899 410561;410562;410563;410564;410565;410566;410567;410568;410569;410570;410571;410572 323833;323834;323835;323836;323837;323838;323839;323840;323841;323842;323843;323844;323845 323842 13 SRPGTASSSGGSIAR Unmodified 1389.6961 0.69605384 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 9.8212 9.9331 3 3.7286E-27 8518 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 103.88 94.986 171460000 0 0 0 12344000 10815000 10581000 17082000 11575000 9315800 13289000 0 26917000 19647000 16140000 23760000 48948 5262 43900 410573;410574;410575;410576;410577;410578;410579;410580;410581;410582;410583 323846;323847;323848;323849;323850;323851;323852;323853;323854;323855;323856;323857;323858;323859 323849 13 SRPLATGPSSQSHQEK Unmodified 1708.8493 0.84926002 3969 Q96RL1 UIMC1 BRCA1-A complex subunit RAP80 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 8.4812 8.5891 3 0.0004665 6909 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 59.606 48.501 55292000 0 0 0 3473500 2886700 2165100 2242200 1919100 2176100 5506700 0 10950000 8231400 5398100 10343000 48949 3969 43901 410584;410585;410586;410587;410588;410589;410590;410591;410592;410593;410594 323860;323861;323862;323863 323862 3 SRPNASGGAACSGPGPEPAVFCEPVVK Unmodified 2697.2639 0.26391897 2892 Q6L8Q7 PDE12 2',5'-phosphodiesterase 12 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 74.207 68.599 3;4 1.7985E-10 84707 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 67.496 57.167 29152000 10882000 0 18269000 0 0 0 0 0 0 0 0 0 0 0 0 48950 2892 43902 410595;410596 323864;323865;323866 323866 3 SRPQGLTEAEQR Unmodified 1370.6902 0.69024019 2042 Q00653 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 17.684 18.103 3 0.016108 17206 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.317 9.5933 16591000 0 0 0 0 0 0 0 0 0 0 0 3844500 3234900 3521500 5990500 48951 2042 43903 410597;410598;410599;410600 323867;323868 323867 2 SRPQGLTEAEQRELEQEAK Unmodified 2198.0927 0.092737771 2042 Q00653 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit yes yes 0 0 2 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 48.088 48.372 4 0.0030963 54554 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 37.624 24.394 90180000 0 0 0 0 0 7209800 0 7693400 5738700 6916100 11366000 0 15844000 11207000 24205000 48952 2042 43904 410601;410602;410603;410604;410605;410606;410607;410608 323869;323870;323871;323872;323873 323869 5 SRQANRGTESK Acetyl (Protein N-term) 1274.6327 0.63272531 347 O43617 TRAPPC3 Trafficking protein particle complex subunit 3 yes yes 1 0 2 By MS/MS 2 0 1 1 5.5205 2.1431 3 0.0029456 4863 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.267 27.484 147490000 147490000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48953 347 43905 410609 323874 323874 0 SRQFSSR Acetyl (Protein N-term) 908.44643 0.44642809 780 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 13.513 13.686 2 0.0084018 12981 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 121.85 75.424 + 152550000 0 0 0 0 5743100 0 14583000 22811000 9940100 20415000 0 17993000 24185000 24813000 12068000 48954 780 43906 410610;410611;410612;410613;410614;410615;410616;410617;410618 323875;323876;323877;323878;323879;323880;323881;323882;323883 323876 7 SRQTPSPDVVLR Unmodified 1353.7365 0.7364621 5054 Q9UPQ0 LIMCH1 LIM and calponin homology domains-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 42.689 42.937 3 0.0031103 48605 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 56.951 42.694 122330000 0 0 0 0 6868600 8017100 13055000 0 7857500 10260000 16878000 15887000 18132000 7978200 17398000 48955 5054 43907 410619;410620;410621;410622;410623;410624;410625;410626;410627;410628 323884;323885;323886;323887;323888;323889;323890;323891 323891 4 SRSEHNLVNIQK Unmodified 1423.7532 0.75317479 3821 Q96ES7 CCDC101 SAGA-associated factor 29 homolog yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 23.361 23.595 3 0.014563 23616 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 39.878 36.017 50920000 0 0 0 922780 0 5065700 0 4089400 3638500 5852700 8265000 0 8967700 7207800 6910800 48956 3821 43908 410629;410630;410631;410632;410633;410634;410635;410636;410637 323892;323893;323894 323894 2 SRSLSASPALGSTK Unmodified 1360.731 0.73104237 667 O95544 NADK NAD kinase yes yes 0 0 1 By MS/MS 2 0 1 1 36.181 29.753 3 0.027992 41687 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 34.928 25.641 19430000 19430000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48957 667 43909 410638 323895 323895 0 SRSPGSPVGEGTGSPPK Unmodified 1595.7903 0.79034816 1361 P35611 ADD1 Alpha-adducin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.65 3.65 5 12 2 1 2 1 1 1 1 1 1 1 1 1 1 1 1 22.411 21.35 2;3 5.434E-13 26885 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 83.758 77.484 343350000 178490000 16118000 30727000 7452500 7983800 8070300 11451000 8288400 11615000 7730100 14562000 11509000 8360100 11216000 9777600 48958 1361 43910 410639;410640;410641;410642;410643;410644;410645;410646;410647;410648;410649;410650;410651;410652;410653;410654;410655 323896;323897;323898;323899;323900;323901;323902;323903;323904;323905;323906;323907;323908;323909;323910;323911 323907 13 SRSTTELDDYSTNK Unmodified 1615.7326 0.73255851 3573 Q8WWI1 LMO7 LIM domain only protein 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 1 2 2 2 2 2 2 2 2 2 2 25.172 25.418 2;3 0.001081 26886 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 56.793 49.754 207890000 0 0 0 11764000 12696000 19888000 16055000 15088000 13260000 19202000 14604000 20242000 16189000 14564000 34341000 48959 3573 43911 410656;410657;410658;410659;410660;410661;410662;410663;410664;410665;410666;410667;410668;410669;410670;410671;410672;410673;410674;410675;410676;410677 323912;323913;323914;323915;323916;323917;323918;323919;323920;323921;323922;323923;323924;323925 323915 12 SRSVIEQGGIQTVDQLIK Unmodified 1970.0797 0.07965389 3549 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 83.969 79.317 3 3.2801E-36 100856 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.384 88.544 389710000 316250000 66585000 6875300 0 0 0 0 0 0 0 0 0 0 0 0 48960 3549 43912 410678;410679;410680;410681 323926;323927;323928;323929;323930;323931 323929 6 SRSVLQPSQQK Acetyl (Protein N-term) 1298.6943 0.69426293 5094 Q9Y2A7 NCKAP1 Nck-associated protein 1 yes yes 1 0 1 By MS/MS 2 0 1 1 31.268 26.816 2 0.01823 35115 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 52.579 21.157 8438200 0 8438200 0 0 0 0 0 0 0 0 0 0 0 0 0 48961 5094 43913 410682 323932 323932 1 SRSYNDELQFLEK Acetyl (Protein N-term) 1669.7948 0.79476484 5168 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog yes yes 1 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 81.4 76.264 2 2.2451E-06 95596 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.18 53.493 318060000 22699000 285560000 9795200 0 0 0 0 0 0 0 0 0 0 0 0 48962 5168 43914 410683;410684;410685 323933;323934;323935 323933 3 SRTAVDGFQSESPEK Unmodified 1636.7693 0.76927837 5078 Q9Y232 CDYL Chromodomain Y-like protein yes yes 0 0 1 By MS/MS 2 0 1 1 35.648 32.264 3 0.0013892 40703 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 46.156 40.945 3679800 0 0 3679800 0 0 0 0 0 0 0 0 0 0 0 0 48963 5078 43915 410686 323936 323936 1 SRTDSLAATPPAAK Unmodified 1384.731 0.73104237 5203 Q9Y4H2 IRS2 Insulin receptor substrate 2 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 26.764 26.851 3 0.0015768 28656 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 51.004 39.792 56096000 0 0 0 4270700 6619100 8830900 9501900 0 7467000 0 0 10108000 9298600 0 0 48964 5203 43916 410687;410688;410689;410690;410691;410692;410693 323937;323938;323939;323940;323941;323942 323940 6 SRTEAESWYQTK Unmodified 1484.6896 0.68957148 74 CON__P13647;P13647 KRT5 Keratin, type II cytoskeletal 5 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 25 3 2 2 2 2 2 2 2 2 2 2 2 32.632 32.842 2;3 5.0806E-26 36463 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 164.81 116.39 + 3879700000 0 0 0 190420000 190460000 357730000 166550000 720350000 187870000 388550000 309660000 549120000 479260000 167490000 172260000 48965 74 43917 410694;410695;410696;410697;410698;410699;410700;410701;410702;410703;410704;410705;410706;410707;410708;410709;410710;410711;410712;410713;410714;410715;410716;410717;410718 323943;323944;323945;323946;323947;323948;323949;323950;323951;323952;323953;323954;323955;323956;323957;323958;323959;323960;323961;323962;323963;323964 323961 17 SRTGSESSQTGTSTTSSR Unmodified 1815.8195 0.81947604 1166 P23588 EIF4B Eukaryotic translation initiation factor 4B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 5.6397 5.7694 3 2.2432E-34 2996 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 124.63 113.19 565230000 0 0 0 29265000 21451000 0 33249000 29339000 20818000 23472000 73121000 89958000 47903000 73784000 122870000 48966 1166 43918 410719;410720;410721;410722;410723;410724;410725;410726;410727;410728;410729 323965;323966;323967;323968;323969;323970;323971;323972;323973;323974 323966 7 SRTIGIIGAPFSK Unmodified 1345.7718 0.77178497 794 P05089 ARG1 Arginase-1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 69.848 69.81 3 0.034701 81355 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 30.998 25.534 36817000 0 0 0 12555000 1447100 2920300 0 7995800 3697100 0 0 4737100 3464700 0 0 48967 794 43919 410730;410731;410732;410733;410734;410735;410736 323975 323975 0 SRTPSASNDDQQE Unmodified 1433.6019 0.60187869 364 O43765 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.0815 7.1942 2 3.0208E-18 5366 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 158.79 134.57 97190000 0 0 0 4163400 2603800 4246500 5727700 6414000 4703600 8362300 15528000 10600000 7928800 0 26913000 48968 364 43920 410737;410738;410739;410740;410741;410742;410743;410744;410745;410746;410747;410748 323976;323977;323978;323979;323980;323981;323982;323983;323984;323985;323986;323987 323981 12 SRTSVQTEDDQLIAGQSAR Unmodified 2061.0087 0.008673791 1340;1200 P35221;P26232 CTNNA1;CTNNA2 Catenin alpha-1;Catenin alpha-2 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.251 41.429 3 1.0995E-05 46026 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 64.83 54.872 96938000 0 0 0 5213900 5368600 7299100 7472800 7799700 9458500 10459000 9394100 10527000 7941400 6796800 9207600 48969 1340;1200 43921 410749;410750;410751;410752;410753;410754;410755;410756;410757;410758;410759;410760 323988;323989;323990;323991;323992;323993;323994;323995;323996;323997;323998 323989 11 SRTTLPERPLTEVK Unmodified 1625.9101 0.91006937 3955 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 41.164 41.341 3;4 0.0031433 45801 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 68.972 35.768 1039000000 0 0 0 46021000 32004000 62867000 62857000 92731000 82937000 96676000 88057000 141290000 89647000 68301000 175580000 48970 3955 43922 410761;410762;410763;410764;410765;410766;410767;410768;410769;410770;410771;410772;410773;410774;410775;410776;410777;410778;410779;410780;410781;410782;410783;410784 323999;324000;324001;324002;324003;324004;324005;324006;324007 324001 4 SRTVLCGTCGQPADK Unmodified 1648.7661 0.76612402 757 P02545 LMNA Prelamin-A/C;Lamin-A/C yes yes 0 0 1 By MS/MS 2 0 1 1 29.397 23.777 3 0.013286 33456 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 26.548 23.17 15974000 15974000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48971 757 43923 410785 324008 324008 1 SRTYVARNGEPEPTPVVNGEK Unmodified 2299.1557 0.15567238 1409 P40222 TXLNA Alpha-taxilin yes yes 0 0 2 By MS/MS 2 0 1 1 44.22 37.355 3 8.6396E-08 51308 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.156 54.332 11672000 11672000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48972 1409 43924 410786 324009 324009 1 SRVTGIVQEK Unmodified 1115.6299 0.62987176 2837 Q5XPI4 RNF123 E3 ubiquitin-protein ligase RNF123 yes yes 0 0 1 By MS/MS 2 0 1 1 29.476 23.856 2 0.0149 33640 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 114.5 58.947 11983000 11983000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48973 2837 43925 410787 324010 324010 0 SRVTQSNFAVGYK Unmodified 1455.747 0.74702678 1129 P21796 VDAC1 Voltage-dependent anion-selective channel protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 40.213 40.258 3 7.4728E-09 45350 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 90.412 79.367 59920000 0 0 0 26066000 0 5486500 0 8308600 6145600 9063700 0 0 0 4849900 0 48974 1129 43926 410788;410789;410790;410791;410792;410793 324011;324012;324013 324013 3 SRVVLPYLVPK Unmodified 1269.7809 0.78089309 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.691 74.755 3 0.0038786 86038 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 59.265 53.231 181250000 0 0 0 5543500 5088000 26066000 9259600 13145000 13113000 13783000 10086000 22653000 12598000 14150000 35766000 48975 3641 43927 410794;410795;410796;410797;410798;410799;410800;410801;410802;410803;410804;410805 324014;324015;324016;324017;324018;324019;324020;324021;324022;324023;324024 324014 11 SRVWAEPCLIDAAK Unmodified 1614.8188 0.81881152 4394 Q9H4A4 RNPEP Aminopeptidase B yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 69.631 69.956 3 0.0068185 79627 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 30.575 24.86 10524000 0 0 0 0 0 0 0 0 0 0 0 0 0 1511900 9012400 48976 4394 43928 410806;410807 324025 324025 1 SRWDETPASQMGGSTPVLTPGK Oxidation (M) 2317.1009 0.10085962 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 2 1 1 1 1 1 1 1 1 1 1 58.3 57.138 2;3 2.4347E-72 65534 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 128.12 119.65 523510000 158070000 0 0 0 0 34436000 26540000 29060000 30209000 31235000 45918000 51908000 39969000 31077000 45092000 48977 516 43929 410808;410809;410810;410811;410812;410813;410814;410815;410816;410817;410818;410819 324026;324027;324028;324029;324030;324031;324032;324033;324034;324035;324036;324037;324038;324039;324040 324039 674 15 SRWDETPASQMGGSTPVLTPGK Unmodified 2301.1059 0.10594499 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68.999 68.251 3 3.7545E-66 77657 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 118.51 111.24 797440000 411570000 0 8345900 6839100 9189700 21688000 11860000 22729000 16575000 37058000 42545000 47609000 28617000 44627000 88185000 48978 516 43929 410820;410821;410822;410823;410824;410825;410826;410827;410828;410829;410830;410831;410832;410833 324041;324042;324043;324044;324045;324046;324047;324048;324049;324050;324051;324052;324053;324054;324055;324056 324045 16 SRYDSIDSYLSK Unmodified 1432.6834 0.68342347 1540 P48506 GCLC Glutamate--cysteine ligase catalytic subunit yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 64.712 58.683 3 0.001426 73048 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 66.393 60.245 131270000 122820000 0 8446400 0 0 0 0 0 0 0 0 0 0 0 0 48979 1540 43930 410834;410835 324057;324058;324059 324059 2 SSAAEPPPPPPPESAPSK Acetyl (Protein N-term) 1783.8628 0.8628444 389 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes yes 1 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.786 47.896 2 5.7913E-10 53877 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.466 62.254 54146000 0 0 0 3568700 2428000 4475800 4338800 3013700 3977400 6471200 6764800 0 6019500 4584800 8502800 48980 389 43931 410836;410837;410838;410839;410840;410841;410842;410843;410844;410845;410846;410847 324060;324061;324062;324063;324064;324065;324066;324067;324068;324069 324068 10 SSAAHTQATLLLQEK Unmodified 1596.8471 0.84713476 478 O75330 HMMR Hyaluronan mediated motility receptor yes yes 0 0 0 By MS/MS 2 0 1 1 59.294 51.068 2 0.0045925 69550 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 105.03 72.703 4516600 4516600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48981 478 43932 410848 324070 324070 0 SSACFTLQELK Unmodified 1282.6227 0.62273747 1495 P46060 RANGAP1 Ran GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 3 9 1 1 1 1 1 1 1 1 1 1 1 1 70.656 69.414 2 8.0334E-10 88259 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 147.2 124.49 505640000 10095000 406990000 3356800 0 3879500 6565500 0 0 6305400 5645900 12350000 11659000 10842000 11931000 16024000 48982 1495 43933 410849;410850;410851;410852;410853;410854;410855;410856;410857;410858;410859;410860 324071;324072;324073;324074;324075;324076;324077;324078;324079;324080 324073 10 SSADSNMDDICK Unmodified 1341.5177 0.51768005 2183 Q12768 KIAA0196 WASH complex subunit strumpellin yes yes 0 0 0 By MS/MS 10 0 1 1 26.577 27.258 2 0.0056508 28314 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.597 44.734 3757700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3757700 48983 2183 43934 410861 324081 324081 1 SSADTEFSDECTTAER Unmodified 1804.7058 0.70575141 4421 Q9H6S0 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 yes yes 0 0 0 By MS/MS 10 0 1 1 35.231 35.567 2 0.0071094 39247 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 70.089 58.557 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48984 4421 43935 410862 324082 324082 1 SSAEMIENTNSLGK Unmodified 1479.6875 0.68752257 2834 Q5VZL5 ZMYM4 Zinc finger MYM-type protein 4 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 44.32 44.862 2 1.6374E-12 49295 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 127.42 112.28 11117000 0 0 0 0 0 0 0 0 0 0 0 0 5851900 0 5265400 48985 2834 43936 410863;410864 324083;324084 324083 2 SSAEVIAQAR Unmodified 1030.5407 0.5407224 2613 Q16555 DPYSL2 Dihydropyrimidinase-related protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 26.209 26.499 2 0.00090685 26934 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 115.49 79.099 47631000 0 0 0 0 2069900 0 2681000 0 0 3459200 7683700 8841500 3021400 6813300 13061000 48986 2613 43937 410865;410866;410867;410868;410869;410870;410871;410872;410873 324085;324086;324087;324088;324089;324090;324091;324092 324088 6 SSAEVIAQARK Unmodified 1158.6357 0.63568542 2613 Q16555 DPYSL2 Dihydropyrimidinase-related protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 6 2 2 2 23.736 19.712 2;3 6.3712E-10 27494 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 158.87 128.8 685580000 573200000 42852000 69528000 0 0 0 0 0 0 0 0 0 0 0 0 48987 2613 43938 410874;410875;410876;410877;410878;410879 324093;324094;324095 324093 2 SSAEVIAQARKK Unmodified 1286.7306 0.73064844 2613 Q16555 DPYSL2 Dihydropyrimidinase-related protein 2 yes yes 0 0 2 By MS/MS 2 0 1 1 21.653 16.834 3 0.019445 24020 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.355 50.928 48903000 48903000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48988 2613 43939 410880 324096 324096 0 SSAGDTEFVHQNSQEIQR Unmodified 2031.9246 0.92460981 301 O43164 PJA2 E3 ubiquitin-protein ligase Praja-2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 38.321 38.589 3 0.00016156 42781 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 58.577 47.943 76561000 0 0 0 6143300 0 6472300 0 0 6482400 6804100 8932200 7671800 8928900 8731500 16395000 48989 301 43940 410881;410882;410883;410884;410885;410886;410887;410888;410889 324097;324098;324099;324100;324101;324102;324103;324104;324105 324097 9 SSAIGIENIQEVQEK Unmodified 1643.8366 0.83662965 1523 P47736 RAP1GAP Rap1 GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 66.151 66.276 2 0.00035693 76086 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 87.001 70.468 20356000 0 0 0 0 3036500 0 3656300 0 0 0 4304000 0 2656000 0 6703100 48990 1523 43941 410890;410891;410892;410893;410894;410895;410896 324106;324107;324108;324109;324110;324111;324112 324106 7 SSAIPDFRDPQK Unmodified 1359.6783 0.67827852 1691 P52594 AGFG1 Arf-GAP domain and FG repeat-containing protein 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 47.934 48.166 3 0.010011 53457 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 33.782 27.749 170590000 0 0 0 0 8459800 11287000 13047000 12661000 10314000 18715000 17836000 14174000 12755000 17083000 34259000 48991 1691 43942 410897;410898;410899;410900;410901;410902;410903;410904;410905;410906;410907 324113;324114;324115;324116;324117;324118 324117 6 SSAIVEIFSK Unmodified 1079.5863 0.58627561 4893 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.18 3.74 3 1 7 1 2 1 1 1 1 1 1 1 1 78.537 77.211 2 0.0042134 99176 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.9 72.735 119970000 47248000 5576000 6341000 0 7979900 0 8357000 7916900 6827800 0 9533300 11209000 8985400 0 0 48992 4893 43943 410908;410909;410910;410911;410912;410913;410914;410915;410916;410917;410918 324119;324120;324121;324122;324123;324124;324125;324126;324127;324128;324129;324130;324131 324124 12 SSALAEYSRLLA Unmodified 1279.6772 0.67721588 4340 Q9H0W8 SMG9 Protein SMG9 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 86.329 82.708 2 0.013455 102933 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.658 70.54 30439000 0 24596000 5842600 0 0 0 0 0 0 0 0 0 0 0 0 48993 4340 43944 410919;410920 324132 324132 1 SSALQWLTPEQTSGK Unmodified 1631.8155 0.81550028 896 P09960 LTA4H Leukotriene A-4 hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 81.634 76.969 2 6.6118E-38 98092 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 136.53 119.9 869830000 54400000 807730000 7698000 0 0 0 0 0 0 0 0 0 0 0 0 48994 896 43945 410921;410922;410923;410924 324133;324134;324135;324136;324137 324135 5 SSALVIQSYIR Unmodified 1235.6874 0.68738664 367 O43795 MYO1B Unconventional myosin-Ib yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.815 76.873 2 0.00032275 88785 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 89.247 64.472 26272000 0 0 0 854430 1771700 3133100 2043400 2520700 1738600 2440000 2759100 3716900 0 2438300 2855300 48995 367 43946 410925;410926;410927;410928;410929;410930;410931;410932;410933;410934;410935 324138;324139;324140;324141;324142;324143;324144 324143 6 SSANDLLASDIFAPPVSEPSGQASPTGQPTALQPNPLDLFK Unmodified 4177.0855 0.085533714 2021 P98082 DAB2 Disabled homolog 2 yes yes 0 0 0 By MS/MS 2 0 1 1 100.96 96.247 4 5.1765E-15 118949 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 51.494 46.561 24442000 0 24442000 0 0 0 0 0 0 0 0 0 0 0 0 0 48996 2021 43947 410936 324145 324145 1 SSANVEEAFFTLAR Unmodified 1540.7522 0.75217174 3689 Q92930 RAB8B Ras-related protein Rab-8B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 88.004 88.113 2 6.8162E-08 102402 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 112.15 101.78 31016000 0 0 0 0 1346200 1696700 1862200 2381600 1822800 5013900 3884000 4594300 1374800 1929600 5109900 48997 3689 43948 410937;410938;410939;410940;410941;410942;410943;410944;410945;410946;410947 324146;324147;324148;324149;324150;324151;324152;324153 324153 8 SSAPADSERGPKPEPPGSGSPAPPR Unmodified 2427.1779 0.17786438 4968 Q9UKJ3 GPATCH8 G patch domain-containing protein 8 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 32.494 32.628 4 0.0031973 35115 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 25.157 21.05 30822000 0 0 0 0 2519100 2659100 3508900 0 3073500 8593400 0 6402100 0 4066200 0 48998 4968 43949 410948;410949;410950;410951;410952;410953;410954 324154;324155 324155 2 SSAPTTPPSVDK Acetyl (Protein N-term) 1227.5983 0.59829686 2610 Q16537 PPP2R5E Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform yes yes 1 0 0 By MS/MS 1 0 1 1 88.974 94.238 2 0.0011001 72007 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 76.282 64.787 10538000 10538000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48999 2610 43950 410955 324156;324157 324157 2 SSAQDPQAVLGALGR Unmodified 1468.7634 0.76340513 1210 P26640 VARS Valine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.579 75.638 2 1.7326E-20 87257 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 149.49 133.24 596850000 0 0 0 21275000 24073000 54542000 29484000 30437000 23288000 62838000 60191000 67020000 36826000 59394000 127490000 49000 1210 43951 410956;410957;410958;410959;410960;410961;410962;410963;410964;410965;410966;410967 324158;324159;324160;324161;324162;324163;324164;324165;324166;324167;324168 324163 11 SSAQLLEDWGMEDIDHVFSEEDYRTLTNYK Unmodified 3590.6148 0.61475815 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 0 1 By MS/MS 2 0 1 1 98.609 90.478 4 4.3113E-12 116715 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.541 58.558 32321000 32321000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49001 2451 43952 410968 324169 324169 1 SSAQLQTNYPSSDNSLYTNAK Unmodified 2288.0557 0.055683563 1841 P61244 MAX Protein max yes yes 0 0 0 By matching By MS/MS By matching By matching By matching 10 0 5 1 1 1 1 1 56.139 56.365 2 0.010588 63817 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 41.092 36.201 19529000 0 0 0 0 0 3236600 3362200 2735200 0 0 0 0 0 4528100 5666900 49002 1841 43953 410969;410970;410971;410972;410973 324170 324170 1 SSASAPDVDDPEAFPALA Unmodified 1758.7948 0.79482442 3405 Q8NC51 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.94 3.58 1 3 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85.57 84.988 2 2.4347E-34 97589 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 124.67 113.35 1746400000 393620000 49314000 5659400 87889000 119980000 79936000 99247000 89005000 70292000 101560000 119050000 164270000 100280000 96324000 169940000 49003 3405 43954 410974;410975;410976;410977;410978;410979;410980;410981;410982;410983;410984;410985;410986;410987;410988;410989 324171;324172;324173;324174;324175;324176;324177;324178;324179;324180;324181;324182;324183;324184;324185;324186;324187;324188 324188 18 SSASEFQPSFHQADNVR Unmodified 1905.8606 0.86055299 2975 Q6UUV7 CRTC3 CREB-regulated transcription coactivator 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 50.147 50.309 3 1.217E-52 55683 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 132.59 125.64 520320000 0 0 0 26900000 20286000 0 30808000 20118000 0 66369000 62584000 48955000 67895000 84530000 91878000 49004 2975 43955 410990;410991;410992;410993;410994;410995;410996;410997;410998;410999;411000 324189;324190;324191;324192;324193;324194;324195;324196;324197;324198;324199;324200;324201;324202;324203 324193 15 SSASFSTTAVSAR Unmodified 1270.6153 0.61534391 1857 P61764 STXBP1 Syntaxin-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 37.912 38.158 2 0.00059549 41177 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.937 64.608 23821000 0 0 0 2515100 0 3867900 0 0 0 3535600 0 4782100 0 4537500 4583000 49005 1857 43956 411001;411002;411003;411004;411005;411006;411007 324204;324205;324206;324207;324208 324206 4 SSASGPNAPPALFELCGR Unmodified 1829.873 0.87303193 2518 Q15345 LRRC41 Leucine-rich repeat-containing protein 41 yes yes 0 0 0 By matching By MS/MS By matching 10 0 3 1 1 1 80.936 81.122 2 0.029698 94011 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 39.424 32.451 26425000 0 0 0 0 0 0 0 4900700 0 0 0 11649000 0 0 9875600 49006 2518 43957 411008;411009;411010 324209 324209 1 SSASTAVSAAPTEK Unmodified 1305.6412 0.64122431 775 P04150 NR3C1 Glucocorticoid receptor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.881 22.088 2 9.9366E-20 23083 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 172.17 149.43 872430000 0 0 0 44884000 42618000 66603000 68647000 67859000 60527000 72521000 91139000 116480000 81549000 77803000 81800000 49007 775 43958 411011;411012;411013;411014;411015;411016;411017;411018;411019;411020;411021;411022 324210;324211;324212;324213;324214;324215;324216;324217;324218;324219;324220;324221 324218 12 SSASVTAFEK Acetyl (Protein N-term) 1067.5135 0.5135046 3098 Q7Z4H7 HAUS6 HAUS augmin-like complex subunit 6 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 8.71 3.15 1 6 1 1 1 1 1 1 1 61.021 61.945 2 0.0040525 61739 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 52.278 26.98 29494000 3410900 0 0 0 2928700 3262800 3497800 0 0 0 0 5825500 4136300 0 6431800 49008 3098 43959 411023;411024;411025;411026;411027;411028;411029 324222;324223 324222 2 SSASVVFTTYTQK Unmodified 1417.7089 0.70890994 3051 Q7L5D6 GET4 Golgi to ER traffic protein 4 homolog yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS 6.9 3.81 3 1 6 1 2 1 1 1 1 1 1 1 62.511 60.316 2 0.00057126 68296 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.113 72.39 150300000 37135000 88300000 4294800 0 2121400 0 1808800 4294700 0 0 0 0 1458400 3259100 7624600 49009 3051 43960 411030;411031;411032;411033;411034;411035;411036;411037;411038;411039 324224;324225;324226;324227;324228 324225 5 SSATVTGEPPSYSSGSDSSK Unmodified 1929.844 0.84395945 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.11 32.297 2 7.7798E-47 34676 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 145.71 142.28 142500000 0 0 0 7386600 8524100 9546100 11166000 13280000 9475900 11207000 10941000 17687000 14474000 11101000 17707000 49010 1364 43961 411040;411041;411042;411043;411044;411045;411046;411047;411048;411049;411050;411051 324229;324230;324231;324232;324233;324234;324235;324236;324237;324238;324239;324240;324241;324242 324240 14 SSAVDPEPQVK Unmodified 1155.5772 0.57716749 2757 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 27.13 27.453 2 0.03694 28341 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.282 18.388 36947000 0 0 0 0 0 13342000 0 0 6485800 0 9583300 0 0 0 7536000 49011 2757 43962 411052;411053;411054;411055 324243 324243 1 SSAVQQLLEK Unmodified 1101.603 0.60298831 5040 Q9UNQ2 DIMT1 Probable dimethyladenosine transferase yes yes 0 0 0 By MS/MS By matching By MS/MS By matching 10 0 4 1 1 1 1 59.65 59.867 2 0.0021885 68422 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 85.744 50.126 13014000 0 0 0 0 0 2871500 0 2773900 0 4555700 0 2813200 0 0 0 49012 5040 43963 411056;411057;411058;411059 324244;324245 324244 2 SSAVVVDAIPVFLEK Unmodified 1572.8763 0.87630962 2424 Q14669 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 92.033 92.141 2 1.4697E-05 106860 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.653 71.993 12593000 0 0 0 0 874340 975610 709770 1262300 662120 2344700 1316800 1635800 0 1049400 1762000 49013 2424 43964 411060;411061;411062;411063;411064;411065;411066;411067;411068;411069 324246;324247;324248;324249;324250;324251;324252;324253;324254 324248 9 SSAYESLMEIVK Oxidation (M) 1371.6592 0.65918256 2457 Q14974 KPNB1 Importin subunit beta-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 2 2 1 2 2 2 2 2 2 2 2 76.298 76.379 2 1.7309E-05 87769 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 94.692 76.828 335910000 0 0 0 6103300 12068000 40573000 8875100 17953000 15687000 47017000 40414000 40210000 21478000 29639000 55896000 49014 2457 43965 411070;411071;411072;411073;411074;411075;411076;411077;411078;411079;411080;411081;411082;411083;411084;411085;411086;411087;411088;411089;411090;411091 324255;324256;324257;324258;324259;324260;324261;324262;324263;324264;324265;324266;324267;324268;324269;324270 324265 4046 14 SSAYESLMEIVK Unmodified 1355.6643 0.66426794 2457 Q14974 KPNB1 Importin subunit beta-1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 85.515 85.656 2 2.4911E-05 99330 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 93.096 80.059 103710000 0 0 0 0 0 9777600 3695700 6561300 3801800 11837000 7604800 6043300 4302800 8883200 41206000 49015 2457 43965 411092;411093;411094;411095;411096;411097;411098;411099;411100;411101 324271;324272;324273;324274;324275;324276;324277;324278;324279;324280 324276 8 SSCDLQILDAAIVEK Unmodified 1660.8342 0.83418681 3295 Q8IZH2 XRN1 5'-3' exoribonuclease 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 84.951 85.093 2 5.9701E-06 98582 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 82.543 71.956 35175000 0 0 0 0 0 0 0 0 4787700 5096200 5169300 7069800 2614800 3588700 6848700 49016 3295 43966 411102;411103;411104;411105;411106;411107;411108;411109 324281;324282;324283;324284;324285;324286;324287;324288;324289 324281 9 SSCGHSWSGGK Unmodified 1148.4669 0.46690553 95 CON__Q5D862;Q5D862 FLG2 Filaggrin-2 yes no 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 7.1192 7.0812 3 0.011321 5033 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 43.781 34.193 + 7126500 0 0 0 5588600 0 744130 793720 0 0 0 0 0 0 0 0 49017 95 43967 411110;411111;411112 324290 324290 1 SSCLPAQQVETEGVAPHK Unmodified 1936.9313 0.93127509 2842 Q659A1 ICE2 Little elongation complex subunit 2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 51.185 45.85 3 0.013197 56763 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 24.279 16.498 27891000 0 27891000 0 0 0 0 0 0 0 0 0 0 0 0 0 49018 2842 43968 411113;411114 324291 324291 1 SSCQIIQFMEGDK Unmodified 1541.6854 0.68541408 2791 Q5TAQ9 DCAF8 DDB1- and CUL4-associated factor 8 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 83.625 80.139 2 0.0026663 99666 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.465 78.459 95610000 0 92705000 2904300 0 0 0 0 0 0 0 0 0 0 0 0 49019 2791 43969 411115;411116;411117 324292;324293;324294 324292 3 SSCQIIQFMEGDK Oxidation (M) 1557.6803 0.68032871 2791 Q5TAQ9 DCAF8 DDB1- and CUL4-associated factor 8 yes yes 0 1 0 By MS/MS 2 0 1 1 64.34 58.433 2 0.0040521 74919 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.229 57.756 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49020 2791 43969 411118 324295 324295 4425 1 SSCSEFSK Unmodified 930.3753 0.37529656 3933 Q96N67 DOCK7 Dedicator of cytokinesis protein 7 yes yes 0 0 0 By MS/MS 2 0 1 1 11.371 8.0929 2 0.015843 11129 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.195 76.269 36991000 0 36991000 0 0 0 0 0 0 0 0 0 0 0 0 0 49021 3933 43970 411119 324296 324296 1 SSDAFTTQHALR Unmodified 1332.6422 0.64222736 632 O95239 KIF4A Chromosome-associated kinesin KIF4A yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 32.632 33.031 2 4.2818E-08 36169 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 122.96 93.792 32159000 0 0 0 0 0 5452800 0 0 0 7295700 0 7259900 0 0 12151000 49022 632 43971 411120;411121;411122;411123 324297;324298;324299 324297 1 SSDASTAQPPESQPLPASQTPASNQPK Unmodified 2720.2889 0.28893098 1546 P48634 PRRC2A Protein PRRC2A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.413 46.58 3 7.228E-31 52338 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 81.888 79.006 216840000 0 0 0 13058000 14907000 13634000 16040000 10274000 12208000 24027000 24325000 25186000 20486000 18270000 24423000 49023 1546 43972 411124;411125;411126;411127;411128;411129;411130;411131;411132;411133;411134;411135 324300;324301;324302;324303;324304;324305;324306;324307;324308;324309;324310;324311;324312;324313;324314 324301 15 SSDEAVILCK Unmodified 1120.5434 0.54342452 5036 Q9UNM6 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.7 3.52 2 1 7 1 2 1 1 1 1 1 1 1 43.03 41.458 2 9.3877E-06 46625 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 147.29 123.71 536250000 6805500 231300000 0 23195000 0 28577000 0 0 0 46568000 67754000 89856000 0 16647000 25538000 49024 5036 43973 411136;411137;411138;411139;411140;411141;411142;411143;411144;411145 324315;324316;324317;324318;324319;324320;324321;324322;324323;324324 324316 10 SSDECVVALCDQWYLDYGEENWK Unmodified 2865.1898 0.18981056 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS 2 0 1 1 95.652 87.522 3 0.00041596 113190 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.431 48.818 6349500 6349500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49025 4819 43974 411146 324325 324325 1 SSDFLESAELDSGGFGK Unmodified 1744.7792 0.77917435 2313 Q13546 RIPK1 Receptor-interacting serine/threonine-protein kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.287 80.376 2 0.0001592 92917 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 103.2 97.481 128640000 0 0 0 3044500 0 14192000 7767800 9642200 6832600 17128000 13571000 11342000 8254200 9869000 26995000 49026 2313 43975 411147;411148;411149;411150;411151;411152;411153;411154;411155;411156;411157;411158 324326;324327;324328;324329;324330;324331;324332;324333;324334;324335;324336;324337 324326 9 SSDGPIQRFDK Unmodified 1248.6099 0.6098646 4720 Q9NX70 MED29 Mediator of RNA polymerase II transcription subunit 29 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 32.911 33.1 3 0.010681 35039 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.564 24.905 81529000 0 0 0 4627400 3607500 5747100 6390600 5637400 0 8470200 7702400 10994000 7460100 5739700 15152000 49027 4720 43976 411159;411160;411161;411162;411163;411164;411165;411166;411167;411168;411169 324338;324339 324339 2 SSDGTWARPVGK Unmodified 1259.6258 0.62584901 178 O00750 PIK3C2B Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit beta yes yes 0 0 1 By MS/MS 2 0 1 1 32.484 26.447 3 1.6865E-05 37173 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.245 70.193 24055000 24055000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49028 178 43977 411170 324340;324341;324342 324341 3 SSDIVSSVR Unmodified 948.48762 0.4876242 2463 Q14C86 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.09 30.281 2 2.5864E-05 31597 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 138.78 82.515 357100000 0 0 0 22863000 22754000 31901000 27138000 21807000 19359000 33391000 32056000 36628000 38451000 32146000 38608000 49029 2463 43978 411171;411172;411173;411174;411175;411176;411177;411178;411179;411180;411181;411182 324343;324344;324345;324346;324347;324348;324349;324350;324351;324352 324346 3 SSDPFSLWSTDEK Unmodified 1497.6624 0.66235368 3024 Q70CQ2 USP34 Ubiquitin carboxyl-terminal hydrolase 34 yes yes 0 0 0 By MS/MS 2 0 1 1 85.888 81.114 2 0.023178 100752 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.286 63.696 49054000 0 49054000 0 0 0 0 0 0 0 0 0 0 0 0 0 49030 3024 43979 411183 324353 324353 0 SSDPLGDTASNLGSAVDELMR Oxidation (M) 2149.9797 0.97974143 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 2 1 1 2 2 84.619 84.71 2;3 1.0061E-97 97885 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 174.62 170.9 80312000 0 0 0 0 4497400 6116800 0 0 0 20028000 7127500 9877400 0 10623000 22042000 49031 3119 43980 411184;411185;411186;411187;411188;411189;411190;411191;411192;411193 324354;324355;324356;324357;324358;324359 324356 4736 6 SSDQPLTVPVSPK Unmodified 1353.714 0.71399532 5009 Q9ULW0 TPX2 Targeting protein for Xklp2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 56.181 56.31 2 0.00072537 64437 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 80.706 59.242 263780000 0 0 0 17688000 18132000 18367000 0 18004000 16202000 28239000 22330000 35703000 27966000 26764000 34382000 49032 5009 43981 411194;411195;411196;411197;411198;411199;411200;411201;411202;411203;411204 324360;324361;324362;324363;324364;324365;324366;324367;324368;324369;324370;324371 324371 11 SSDTNIFDSNVPSNK Unmodified 1623.7376 0.73764389 2960 Q6PJT7 ZC3H14 Zinc finger CCCH domain-containing protein 14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 2 1 55.024 54.377 2 3.4366E-27 61717 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 134.98 128.54 109230000 0 26055000 0 0 5314900 5517600 5791900 4724700 4634200 8585700 8940700 10682000 10116000 8273400 10590000 49033 2960 43982 411205;411206;411207;411208;411209;411210;411211;411212;411213;411214;411215;411216;411217;411218 324372;324373;324374;324375;324376;324377;324378;324379;324380;324381 324376 10 SSDVHSSGSSDAHMDASGPSDSDMPSR Unmodified 2705.0566 0.056564554 244 O15042 U2SURP U2 snRNP-associated SURP motif-containing protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 30.486 30.729 4 1.2774E-30 33778 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 78.837 76.364 73078000 0 0 0 2413100 0 7338800 3206800 4262400 4340400 5843000 6436700 10854000 5754600 7545600 15083000 49034 244 43983 411219;411220;411221;411222;411223;411224;411225;411226;411227;411228;411229 324382;324383;324384;324385;324386;324387;324388;324389;324390;324391 324382 9 SSDVSWSDTR Unmodified 1138.4891 0.48908076 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 30.823 31.061 2 0.0018817 33516 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 96.668 77.977 104080000 0 0 0 0 8535200 5928800 7120300 7624000 9953600 9192000 9110400 16763000 9191700 10271000 10389000 49035 213 43984 411230;411231;411232;411233;411234;411235;411236;411237;411238;411239;411240 324392;324393;324394;324395;324396;324397;324398;324399;324400;324401;324402;324403;324404 324396 10 SSDVSWSDTRR Unmodified 1294.5902 0.59019179 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 24.251 24.454 2;3 8.264E-38 25948 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 160.36 136.61 1069200000 0 0 0 57850000 64622000 56649000 75306000 99251000 49535000 82292000 117290000 154790000 112130000 87962000 111550000 49036 213 43985 411241;411242;411243;411244;411245;411246;411247;411248;411249;411250;411251;411252;411253;411254;411255;411256;411257;411258;411259;411260;411261;411262;411263;411264 324405;324406;324407;324408;324409;324410;324411;324412;324413;324414;324415;324416;324417;324418;324419;324420;324421;324422;324423;324424;324425;324426;324427 324413 21 SSEAETQQPPAAPPAAPALSAADTK Acetyl (Protein N-term) 2447.1816 0.18161236 1955 P67809 YBX1 Nuclease-sensitive element-binding protein 1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.28 2.44 2 23 1 1 2 2 2 2 2 2 2 2 2 2 1 2 73.734 74.039 2;3 1.1248E-86 81832 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 127.3 123.84 3593100000 66605000 21356000 0 157340000 224140000 389300000 187350000 160770000 247480000 321260000 405270000 514530000 397610000 35668000 464420000 49037 1955 43986 411265;411266;411267;411268;411269;411270;411271;411272;411273;411274;411275;411276;411277;411278;411279;411280;411281;411282;411283;411284;411285;411286;411287;411288;411289 324428;324429;324430;324431;324432;324433;324434;324435;324436;324437;324438;324439;324440;324441;324442;324443;324444;324445;324446;324447 324433 19 SSEAETQQPPAAPPAAPALSAADTKPGTTGSGAGSGGPGGLTSAAPAGGDK Acetyl (Protein N-term) 4513.1481 0.14808698 1955 P67809 YBX1 Nuclease-sensitive element-binding protein 1 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.79 2.98 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 77.827 77.673 4 0 86835 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 196.25 189.8 4129100000 43737000 0 0 230230000 417840000 194290000 296660000 262490000 222050000 410300000 337460000 510460000 454430000 379610000 369580000 49038 1955 43987 411290;411291;411292;411293;411294;411295;411296;411297;411298;411299;411300;411301;411302;411303 324448;324449;324450;324451;324452;324453;324454;324455;324456;324457;324458;324459;324460;324461;324462;324463 324452 16 SSEALEFMK Unmodified 1040.4848 0.48484701 4691 Q9NW68 BSDC1 BSD domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 59.18 58.633 2 0.006757 75934 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.56 70.723 56473000 0 28961000 0 0 0 0 0 0 0 2803300 4807400 6085500 4457800 3191100 6167700 49039 4691 43988 411304;411305;411306;411307;411308;411309;411310 324464;324465;324466;324467;324468;324469;324470 324465 7 SSEAVIWEVLRK Unmodified 1415.7773 0.77726428 5031 Q9UNF1 MAGED2 Melanoma-associated antigen D2 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 81.904 82.038 3 0.0029864 94383 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.915 36.656 26632000 0 0 0 0 0 2866000 0 2354400 1947000 2801600 0 0 0 2651900 14011000 49040 5031 43989 411311;411312;411313;411314;411315;411316 324471;324472;324473 324472 3 SSEDEELRK Unmodified 1091.5095 0.50948185 3955 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 7.9747 7.4863 2 4.16E-09 5261 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 164.53 98.46 153550000 0 42127000 1317700 4293800 4129600 5211900 8657600 8701100 9464600 7041200 25539000 7825000 10400000 8162400 10677000 49041 3955 43990 411317;411318;411319;411320;411321;411322;411323;411324;411325;411326;411327;411328;411329;411330;411331 324474;324475;324476;324477;324478;324479;324480;324481;324482;324483;324484;324485 324478 12 SSEDPNEDIVER Unmodified 1388.6056 0.60556708 745 P01591 IGJ Immunoglobulin J chain yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 32.734 32.907 2 5.0871E-16 35878 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 157.95 117.59 169750000 0 0 0 9261500 5634900 6980600 5773900 13970000 4890900 74635000 13235000 16300000 9064900 0 10007000 49042 745 43991 411332;411333;411334;411335;411336;411337;411338;411339;411340;411341;411342 324486;324487;324488;324489;324490;324491;324492;324493;324494 324486 9 SSEEIESAFR Unmodified 1153.5251 0.52513192 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.797 47.959 2 0.0018193 52869 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 116.73 82.557 172990000 0 0 0 7888200 7488700 14265000 9486600 7173700 6687600 14951000 19533000 18433000 11750000 16283000 39053000 49043 2344 43992 411343;411344;411345;411346;411347;411348;411349;411350;411351;411352;411353;411354 324495;324496;324497;324498;324499;324500;324501;324502;324503;324504;324505;324506;324507 324498 7 SSEEIESAFRALSSEGK Unmodified 1825.8694 0.86938634 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 83.515 78.856 3 2.1769E-46 96384 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 136.34 111.65 490780000 36758000 368340000 85678000 0 0 0 0 0 0 0 0 0 0 0 0 49044 2344 43993 411355;411356;411357;411358 324508;324509;324510;324511;324512;324513 324512 6 SSEELLSALQK Unmodified 1203.6347 0.63468237 5014 Q9UM54 MYO6 Unconventional myosin-VI yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 70.197 69.646 2 1.1494E-10 88330 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 182.98 170.36 301080000 0 208270000 0 4870300 5990800 8371700 7080500 5854100 4560000 7535000 11501000 14135000 6641200 6312400 9955900 49045 5014 43994 411359;411360;411361;411362;411363;411364;411365;411366;411367;411368;411369;411370;411371;411372 324514;324515;324516;324517;324518;324519;324520;324521;324522;324523 324517 8 SSEEMSVENK Unmodified 1138.4812 0.48121819 3524 Q8TF05 PPP4R1 Serine/threonine-protein phosphatase 4 regulatory subunit 1 yes yes 0 0 0 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 14.822 15.084 2 0.0044145 14054 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.928 44.754 11232000 0 0 0 0 1085500 0 0 0 0 0 1466200 0 0 3033800 5646300 49046 3524 43995 411373;411374;411375;411376 324524 324524 1 SSEEPGVATQR Unmodified 1159.5469 0.54692999 3156 Q86UU1 PHLDB1 Pleckstrin homology-like domain family B member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.226 15.397 2 1.7865E-05 14480 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 133.13 110.9 72936000 0 0 0 4000600 2454300 3805500 4855100 5726600 2966000 5978600 8110900 9679300 9115600 6097200 10146000 49047 3156 43996 411377;411378;411379;411380;411381;411382;411383;411384;411385;411386;411387;411388 324525;324526;324527;324528;324529;324530;324531;324532;324533 324528 9 SSEEQQQDVSEFTHK Unmodified 1777.7755 0.77548596 3978 Q96RU2 USP28 Ubiquitin carboxyl-terminal hydrolase 28 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 33.338 33.534 3 3.5731E-07 35812 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.136 60.931 48811000 0 0 0 0 1702800 7194900 2928900 2627900 0 5588500 6721300 0 7463400 6044300 8538800 49048 3978 43997 411389;411390;411391;411392;411393;411394;411395;411396;411397 324534;324535;324536;324537;324538;324539 324537 6 SSEFASIPANSSRPLSNISK Unmodified 2091.0596 0.059646729 4755 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.606 65.692 3 0.00018868 75166 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 43.955 34.859 68915000 0 0 0 3603300 3371800 6604100 4455000 4109200 5560100 5653600 6598100 8883300 4595000 5621600 9859900 49049 4755 43998 411398;411399;411400;411401;411402;411403;411404;411405;411406;411407;411408;411409 324540;324541;324542;324543;324544;324545;324546;324547;324548;324549;324550 324549 11 SSEFFEMLEK Oxidation (M) 1261.5537 0.55365485 2850 Q684P5 RAP1GAP2 Rap1 GTPase-activating protein 2 yes yes 0 1 0 By MS/MS 2 0 1 1 35.563 30.716 2 0.034754 40302 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.118 35.195 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49050 2850 43999 411410 324551 324551 1 SSEGGVGVGPGGGDEPPTSPR Unmodified 1894.8657 0.86569795 5203 Q9Y4H2 IRS2 Insulin receptor substrate 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 2 1 1 1 1 41.978 42.226 2 2.7879E-17 47165 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 91.441 77.022 59042000 0 0 0 0 3231300 6098900 5811600 0 3713900 6077000 6548100 8049500 6025600 5584000 7902000 49051 5203 44000 411411;411412;411413;411414;411415;411416;411417;411418;411419;411420;411421 324552;324553;324554;324555;324556;324557;324558;324559;324560 324558 9 SSEGSLGGQNSGIGGR Unmodified 1461.6808 0.68079771 4885 Q9UGP4 LIMD1 LIM domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.286 26.485 2 1.6864E-06 28063 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 96.745 80.113 98928000 0 0 0 4974700 5365700 11008000 7552700 6332800 4073500 11056000 9088400 13802000 7901900 6724300 11048000 49052 4885 44001 411422;411423;411424;411425;411426;411427;411428;411429;411430;411431;411432;411433 324561;324562;324563;324564;324565;324566;324567;324568;324569;324570;324571;324572 324567 12 SSEHINEGETAMLVCK Unmodified 1803.8131 0.81313379 1362 P35613 BSG Basigin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.08 3.33 2 1 9 3 1 1 1 1 1 1 1 1 1 50.718 49.429 2;3 2.2085E-10 64786 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.38 91.136 214450000 0 76856000 0 8840400 10750000 0 0 12139000 9250200 17899000 24087000 0 11593000 19234000 23801000 49053 1362 44002 411434;411435;411436;411437;411438;411439;411440;411441;411442;411443;411444;411445 324573;324574;324575;324576;324577;324578;324579;324580;324581;324582;324583;324584 324575 11 SSEHINEGETAMLVCK Oxidation (M) 1819.808 0.80804841 1362 P35613 BSG Basigin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 7.25 3.56 1 2 5 3 1 1 1 1 1 42.592 40.817 3 0.00036709 50235 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 63.894 52.614 70458000 0 45470000 0 0 3937400 5057600 0 0 0 7003000 4325100 0 0 0 4665500 49054 1362 44002 411446;411447;411448;411449;411450;411451;411452;411453 324585;324586;324587 324585 2107 2 SSEHTLAK Unmodified 871.43995 0.43994572 5192 Q9Y4B6 VPRBP Protein VPRBP yes yes 0 0 0 By MS/MS 2 0 2 2 5.3386 2.0982 2 5.7315E-08 4029 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 161.9 120.25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49055 5192 44003 411454;411455 324588;324589 324588 2 SSEIEQAVQSLDR Unmodified 1460.7107 0.71070086 4080 Q9BPX5 ARPC5L Actin-related protein 2/3 complex subunit 5-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 74.799 74.909 2 4.7783E-05 86445 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 106.29 86.504 38852000 0 0 0 0 2785200 2828100 2043100 2298600 0 3549200 6039900 5340600 3247800 3510400 7209200 49056 4080 44004 411456;411457;411458;411459;411460;411461;411462;411463;411464;411465;411466 324590;324591;324592;324593;324594;324595;324596;324597;324598;324599;324600 324598 11 SSEIEQAVQSLDRNGVDLLMK Unmodified 2331.174 0.17402456 4080 Q9BPX5 ARPC5L Actin-related protein 2/3 complex subunit 5-like protein yes yes 0 0 1 By MS/MS 2 0 2 2 97.925 93.171 3 3.317E-05 114953 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.784 57.681 55692000 0 55692000 0 0 0 0 0 0 0 0 0 0 0 0 0 49057 4080 44005 411467;411468 324601;324602 324601 2 SSELDASDSSSSSNLSLAK Unmodified 1883.8596 0.85960952 1216 P27448 MARK3 MAP/microtubule affinity-regulating kinase 3 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 48.93 49.365 2 0.0014717 54732 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.774 32.874 10292000 0 0 0 0 0 0 0 0 0 0 10292000 0 0 0 0 49058 1216 44006 411469;411470 324603;324604 324603 2 SSELEQYLQR Unmodified 1251.6095 0.60953025 4890 Q9UH65 SWAP70 Switch-associated protein 70 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 63.74 63.38 2 0.0016494 72527 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 123.98 105 20684000 0 0 0 6638400 0 14045000 0 0 0 0 0 0 0 0 0 49059 4890 44007 411471;411472;411473;411474;411475;411476;411477;411478 324605;324606;324607;324608;324609;324610;324611;324612 324605 8 SSELQAIK Unmodified 874.476 0.47599688 4972 Q9UKM9 RALY RNA-binding protein Raly yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28.592 28.204 2 0.0068169 29918 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 95.541 42.378 406000000 0 187950000 1583400 10885000 10691000 12423000 12739000 14223000 8699300 20046000 22959000 27160000 19872000 22867000 33910000 49060 4972 44008 411479;411480;411481;411482;411483;411484;411485;411486;411487;411488;411489;411490;411491;411492 324613;324614;324615;324616;324617;324618 324618 6 SSEMEVHEESK Oxidation (M) 1306.5347 0.53471033 3290 Q8IZ21 PHACTR4 Phosphatase and actin regulator 4 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 6.5966 3.2958 3 0.00098959 4866 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 80.979 75.137 41709000 0 41709000 0 0 0 0 0 0 0 0 0 0 0 0 0 49061 3290 44009 411493;411494 324619;324620 324620 4890 2 SSEMEVHEESK Unmodified 1290.5398 0.5397957 3290 Q8IZ21 PHACTR4 Phosphatase and actin regulator 4 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 13.595 10.204 2 4.0744E-09 13780 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 144.65 127.55 15221000 0 15221000 0 0 0 0 0 0 0 0 0 0 0 0 0 49062 3290 44009 411495;411496 324621;324622 324622 2 SSEMLPAFIETSNVDKK Acetyl (Protein N-term) 1936.9452 0.94519382 3484 Q8TBZ6 TRMT10A tRNA methyltransferase 10 homolog A yes yes 1 0 1 By MS/MS 2 0 1 1 90.748 85.852 2 1.7787E-54 106690 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 151.78 139.51 28661000 0 28661000 0 0 0 0 0 0 0 0 0 0 0 0 0 49063 3484 44010 411497 324623 324623 1 SSEMNILIPQDGDYREFPIPEQFK Unmodified 2852.3691 0.36909555 1408 P40123 CAP2 Adenylyl cyclase-associated protein 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 96.667 90.215 3 2.6295E-05 114364 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.295 58.303 35694000 17901000 17794000 0 0 0 0 0 0 0 0 0 0 0 0 0 49064 1408 44011 411498;411499 324624;324625;324626 324624 3 SSEMNVLIPTEGGDFNEFPVPEQFK Oxidation (M) 2826.3058 0.30582659 2055 Q01518 CAP1 Adenylyl cyclase-associated protein 1 yes yes 0 1 0 By MS/MS By MS/MS 2.25 0.433 3 1 3 1 95.027 91.183 2;3 5.4569E-120 113604 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 158.65 155.23 1517700000 0 1515100000 2574000 0 0 0 0 0 0 0 0 0 0 0 0 49065 2055 44012 411500;411501;411502;411503 324627;324628;324629;324630 324628 3343 4 SSEMNVLIPTEGGDFNEFPVPEQFK Unmodified 2810.3109 0.31091197 2055 Q01518 CAP1 Adenylyl cyclase-associated protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS 2.4 0.49 3 2 1 2 2 96.828 93.524 2;3 7.1163E-56 114811 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.42 114.8 1699400000 1476100 1663900000 33985000 0 0 0 0 0 0 0 0 0 0 0 0 49066 2055 44012 411504;411505;411506;411507;411508 324631;324632;324633;324634;324635;324636 324631 6 SSEMSPVPMR Unmodified 1119.5053 0.50526487 3520 Q8TEU7 RAPGEF6 Rap guanine nucleotide exchange factor 6 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 41.946 42.339 2 0.041619 46333 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.547 21.638 8492000 0 0 0 0 0 0 0 0 0 2170200 0 0 0 2749600 3572200 49067 3520 44013 411509;411510;411511 324637;324638 324637 2 SSENNGTLVSK Unmodified 1134.5517 0.55168102 5193 Q9Y4C1 KDM3A Lysine-specific demethylase 3A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 12.918 13.062 2 0.00057718 11929 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 80.688 65.538 23481000 0 0 0 0 2941900 5581500 3134900 0 0 0 3628800 5317200 2877000 0 0 49068 5193 44014 411512;411513;411514;411515;411516;411517 324639;324640;324641;324642 324642 4 SSENNSLNPEVMR Oxidation (M) 1491.6624 0.66237045 5078 Q9Y232 CDYL Chromodomain Y-like protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 2 1 1 1 1 1 1 30.206 30.369 2 0.0012225 32684 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 61.353 53.31 41723000 0 0 0 9530100 0 0 7850300 0 0 7114500 0 8226500 0 0 9001400 49069 5078 44015 411518;411519;411520;411521;411522;411523;411524;411525 324643;324644;324645;324646;324647;324648;324649 324648 6467 7 SSENPNEVFR Unmodified 1177.5364 0.53636531 1488 P45974 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.284 35.465 2 0.00055195 37882 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 128.38 103.56 292190000 0 0 0 10313000 10037000 22607000 18110000 14882000 10148000 32670000 27413000 29497000 14987000 31616000 69906000 49070 1488 44016 411526;411527;411528;411529;411530;411531;411532;411533;411534;411535;411536;411537 324650;324651;324652;324653;324654;324655;324656;324657;324658;324659 324656 10 SSENSQEDQEVVVVK Unmodified 1675.7901 0.79007339 3319 Q8N392 ARHGAP18 Rho GTPase-activating protein 18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 38.31 38.673 2 4.2849E-05 41772 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.767 79.795 34429000 0 0 0 0 0 6908300 2877600 0 0 3543100 4713200 5361500 3623900 0 7401000 49071 3319 44017 411538;411539;411540;411541;411542;411543;411544;411545 324660;324661;324662;324663;324664;324665;324666 324662 7 SSENSSAERDLADVK Unmodified 1606.7435 0.74345755 4564 Q9NQB0 TCF7L2 Transcription factor 7-like 2 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.399 30.588 3 0.00088044 33202 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 41.967 26.169 172290000 0 0 0 4887600 10784000 10514000 9672000 9618700 8164100 12586000 13642000 31056000 20549000 12626000 28188000 49072 4564 44018 411546;411547;411548;411549;411550;411551;411552;411553;411554;411555;411556;411557 324667;324668;324669;324670;324671;324672;324673 324668 5 SSEPPPPPQPPTHQASVGLLDTPR Acetyl (Protein N-term) 2546.2765 0.2765158 5120 Q9Y2V2 CARHSP1 Calcium-regulated heat stable protein 1 yes yes 1 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 2 1 1 75.891 75.979 2;3 3.396E-15 87692 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 78.285 66.672 107200000 0 0 0 0 8098900 14346000 10629000 7457000 0 0 8532300 0 10447000 32621000 15071000 49073 5120 44019 411558;411559;411560;411561;411562;411563;411564;411565;411566 324674;324675;324676;324677;324678 324675 4 SSEPSTLSNEEYMYAYR Oxidation (M) 2041.8575 0.85750103 1536 P48382 RFX5 DNA-binding protein RFX5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 60.076 60.173 2 1.3991E-41 68593 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 149.23 136.66 151360000 0 0 0 5188400 12091000 10569000 13901000 15109000 12237000 15778000 16649000 17827000 15299000 0 16710000 49074 1536 44020 411567;411568;411569;411570;411571;411572;411573;411574;411575;411576;411577 324679;324680;324681;324682;324683;324684;324685;324686;324687;324688;324689 324687 2442 11 SSEPSTLSNEEYMYAYR Unmodified 2025.8626 0.86258641 1536 P48382 RFX5 DNA-binding protein RFX5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.938 69.017 2 4.8827E-25 78657 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 135.6 130.32 111950000 0 0 0 3771400 5189500 6478600 6789400 10891000 6873100 12636000 12113000 10439000 8254900 8792400 19720000 49075 1536 44020 411578;411579;411580;411581;411582;411583;411584;411585;411586;411587;411588;411589 324690;324691;324692;324693;324694;324695;324696;324697;324698;324699;324700 324693 11 SSEPVQADESQSPR Unmodified 1515.6801 0.68012901 616 O95049 TJP3 Tight junction protein ZO-3 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.057 20.258 2 7.4181E-19 21070 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 126.19 106.43 150340000 0 0 0 11517000 13228000 12834000 12645000 9343400 9044000 19682000 13976000 11895000 12305000 10299000 13570000 49076 616 44021 411590;411591;411592;411593;411594;411595;411596;411597;411598;411599;411600;411601 324701;324702;324703;324704;324705;324706;324707 324701 7 SSEPVQADESQSPRDR Unmodified 1786.8082 0.80818307 616 O95049 TJP3 Tight junction protein ZO-3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 16.653 16.809 3 0.00063071 16845 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 44.807 39.027 25074000 0 0 0 1955800 3074900 0 3077500 1826400 2326700 3910900 2582100 3439100 2881200 0 0 49077 616 44022 411602;411603;411604;411605;411606;411607;411608;411609;411610 324708;324709;324710;324711;324712;324713 324710 4 SSEPVQHEESIRKPSPEPR Unmodified 2188.0873 0.087258463 4867 Q9UDY2 TJP2 Tight junction protein ZO-2 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 2 1 1 2 2 1 24.597 24.845 4;5 0.00021899 26518 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 54.974 34.606 69826000 0 0 0 0 4798600 8168000 5187700 4575900 3984100 9262500 4297200 4442500 9411100 5911000 9787400 49078 4867 44023 411611;411612;411613;411614;411615;411616;411617;411618;411619;411620;411621;411622;411623;411624 324714;324715;324716;324717;324718;324719;324720;324721;324722;324723;324724;324725 324720 12 SSEPVQLTEAETEYFVR Unmodified 1983.9426 0.94255129 4839 Q9UBF2 COPG2 Coatomer subunit gamma-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.6 2.8 1 4 1 1 1 1 1 83.246 82.691 2 0.00045156 95913 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 67.456 62.303 15393000 0 4630100 0 0 0 1474500 0 0 0 3782100 2477200 3028700 0 0 0 49079 4839 44024 411625;411626;411627;411628;411629 324726;324727;324728;324729 324727 4 SSEQILATLK Unmodified 1088.6077 0.60773933 5017 Q9UMS4 PRPF19 Pre-mRNA-processing factor 19 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 63.131 61.793 2 1.0076E-09 70475 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 149.72 115.63 2186300000 37111000 1132700000 37732000 45519000 51482000 64512000 67623000 53766000 52609000 94076000 103500000 116510000 79784000 80018000 169360000 49080 5017 44025 411630;411631;411632;411633;411634;411635;411636;411637;411638;411639;411640;411641;411642;411643;411644;411645 324730;324731;324732;324733;324734;324735;324736;324737;324738;324739;324740;324741;324742;324743;324744;324745;324746;324747;324748;324749 324730 18 SSERSLPDCTPHPNSISIDAGPRQAPK Unmodified 2916.4148 0.41481697 5100 Q9Y2H0 DLGAP4 Disks large-associated protein 4 yes yes 0 0 2 By MS/MS 2 0 1 1 63.216 54.948 4 0.0050118 74252 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 27.389 24.174 7593100 7593100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49081 5100 44026 411646 324750 324750 1 SSESELCIETPK Unmodified 1378.6286 0.62861071 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 50.57 50.726 2 5.4501E-08 56284 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 160.53 147.15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49082 3119 44027 411647;411648;411649;411650;411651;411652 324751;324752;324753;324754;324755;324756 324753 6 SSETLTFK Unmodified 911.46001 0.46001246 4550 Q9NPF5 DMAP1 DNA methyltransferase 1-associated protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 37.248 37.334 2 0.0067687 41911 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 97.798 60.24 213870000 0 0 0 16572000 19714000 23674000 25950000 20188000 19889000 26914000 25342000 35633000 0 0 0 49083 4550 44028 411653;411654;411655;411656;411657;411658;411659;411660;411661;411662 324757;324758;324759;324760;324761;324762;324763 324763 7 SSEVFTTFK Unmodified 1044.5128 0.51277632 1409 P40222 TXLNA Alpha-taxilin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.91 3.42 2 1 8 2 1 1 1 1 1 1 1 1 1 56.456 55.115 2 0.00042128 71091 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 149.65 90.672 311690000 0 207670000 15002000 9171600 8623500 12768000 10215000 10978000 11527000 12144000 0 0 13593000 0 0 49084 1409 44029 411663;411664;411665;411666;411667;411668;411669;411670;411671;411672;411673 324764;324765;324766;324767;324768;324769;324770;324771;324772;324773;324774;324775;324776;324777;324778 324771 15 SSEYPISQNPEGLSADK Unmodified 1820.8428 0.84283724 1396 P38398 BRCA1 Breast cancer type 1 susceptibility protein yes yes 0 0 0 By matching By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 55.028 55.322 2 0.0066166 61951 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 37.681 32.187 15367000 0 0 0 0 0 0 2053100 0 0 0 0 0 4944200 4798500 3571700 49085 1396 44030 411674;411675;411676;411677 324779 324779 1 SSFADISNLLQIEPR Unmodified 1688.8733 0.87334951 2577 Q15785 TOMM34 Mitochondrial import receptor subunit TOM34 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 93.416 93.577 2 3.6464E-21 108651 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 117.79 101.9 11170000 0 0 0 0 0 0 695860 0 816170 2656400 1960700 0 0 0 5040800 49086 2577 44031 411678;411679;411680;411681;411682;411683 324780;324781;324782;324783;324784 324783 5 SSFANVAAATPAIK Unmodified 1346.7194 0.71941505 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 66.426 65.393 2 1.9428E-22 74445 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 148.28 139.07 933730000 5532200 584970000 0 24389000 20315000 36180000 28606000 31699000 23912000 36537000 38961000 45881000 27569000 29175000 0 49087 4139 44032 411684;411685;411686;411687;411688;411689;411690;411691;411692;411693;411694;411695;411696 324785;324786;324787;324788;324789;324790;324791;324792;324793;324794;324795;324796;324797;324798 324790 14 SSFASSSASDASK Unmodified 1230.5364 0.53642488 3876 Q96IF1 AJUBA LIM domain-containing protein ajuba yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 14.122 14.18 2 0.00087805 13657 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 83.397 74.864 23665000 0 0 0 3004800 0 4334200 2770100 2699400 2604600 0 0 0 8252100 0 0 49088 3876 44033 411697;411698;411699;411700;411701;411702 324799;324800;324801;324802 324800 4 SSFDLLPR Unmodified 933.49198 0.4919813 594 O94864 SUPT7L STAGA complex 65 subunit gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 72.215 72.276 2 0.012232 82996 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 75.109 51.137 76498000 0 0 0 5843300 6568600 6868700 6207900 0 5331100 9086100 7610200 8387900 6654800 5544400 8395100 49089 594 44034 411703;411704;411705;411706;411707;411708;411709;411710;411711;411712;411713 324803;324804;324805;324806;324807;324808;324809;324810 324808 8 SSFFIEPQKPVFPETR Unmodified 1907.9781 0.97814893 3897 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.11 80.168 3 3.9934E-05 93124 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 76.391 72.211 143760000 0 0 0 4308100 4600700 9360900 6160000 11219000 8522300 13916000 10917000 16244000 10468000 12838000 35201000 49090 3897 44035 411714;411715;411716;411717;411718;411719;411720;411721;411722;411723;411724;411725 324811;324812;324813;324814;324815;324816;324817;324818;324819;324820;324821;324822;324823 324820 13 SSFFSDR Unmodified 844.37153 0.37153181 170 O00571 DDX3X ATP-dependent RNA helicase DDX3X yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 38.492 38.626 2 0.015446 42029 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 117.93 107.63 440070000 0 0 0 28281000 35000000 45487000 41822000 30092000 33588000 48512000 0 54820000 0 51124000 71344000 49091 170 44036 411726;411727;411728;411729;411730;411731;411732;411733;411734;411735 324824;324825;324826;324827;324828;324829 324829 4 SSFLASLNPK Unmodified 1062.571 0.5709599 2424 Q14669 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes yes 0 0 0 By MS/MS 2 0 1 1 78.216 70.086 2 0.049075 92302 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.378 55.675 9103500 9103500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49092 2424 44037 411736 324830 324830 0 SSFLPEDEK Unmodified 1050.487 0.4869555 736 P00813 ADA Adenosine deaminase yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 47.323 40.742 2 0.0073625 52916 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.43 83.028 240670000 5912200 234750000 0 0 0 0 0 0 0 0 0 0 0 0 0 49093 736 44038 411737;411738 324831 324831 1 SSFLVDCSK Unmodified 1041.4801 0.48009598 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 43.495 42.681 2 0.029817 46720 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.423 26.292 237840000 0 210940000 0 0 0 0 0 0 3340300 0 0 0 4195200 6269900 13094000 49094 487 44039 411739;411740;411741;411742;411743 324832;324833;324834 324833 2 SSFNLGTIETK Unmodified 1195.6085 0.60846762 1600 P49790 NUP153 Nuclear pore complex protein Nup153 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65.282 64.089 2 3.6381E-10 81640 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 150.61 122.43 611320000 7854800 190820000 4540400 23213000 25255000 0 32452000 31242000 23371000 42354000 39485000 54307000 46516000 37051000 52851000 49095 1600 44040 411744;411745;411746;411747;411748;411749;411750;411751;411752;411753;411754;411755;411756;411757 324835;324836;324837;324838;324839;324840;324841;324842 324838 7 SSFREEDNTYR Unmodified 1402.6113 0.61132116 362 O43747 AP1G1 AP-1 complex subunit gamma-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 20.214 20.331 3 0.048248 20785 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 31.722 25.574 67839000 0 0 0 3346200 3564900 11711000 4235600 4547400 3633100 11149000 6979400 0 8858400 9814600 0 49096 362 44041 411758;411759;411760;411761;411762;411763;411764;411765;411766;411767 324843 324843 1 SSFSESALEK Acetyl (Protein N-term) 1125.519 0.51898391 4569 Q9NQG5 RPRD1B Regulation of nuclear pre-mRNA domain-containing protein 1B yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.1 2.7 1 9 1 1 1 1 1 1 1 1 1 1 61.628 62.256 2 0.00060962 65465 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 100.25 79.725 239750000 9853100 0 0 15663000 17021000 21225000 0 0 18965000 0 31190000 37903000 19692000 28406000 39833000 49097 4569 44042 411768;411769;411770;411771;411772;411773;411774;411775;411776;411777 324844;324845;324846;324847;324848;324849;324850;324851 324850 8 SSFSITR Unmodified 796.40792 0.40791731 5122 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 33.817 33.925 2 0.023353 37401 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 91.626 17.204 237670000 0 0 0 20068000 22344000 0 23805000 25120000 13882000 0 0 0 59804000 38289000 34359000 49098 5122 44043 411778;411779;411780;411781;411782;411783;411784;411785 324852;324853;324854 324852 3 SSFSQHAR Unmodified 918.43078 0.43077802 757 P02545 LMNA Prelamin-A/C;Lamin-A/C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 6.0696 6.1679 2 0.0069006 3710 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 91.626 74.7 28806000 0 0 0 4863800 2273400 3481700 495190 3513700 2505400 1612400 2951800 2676000 2297100 2135900 0 49099 757 44044 411786;411787;411788;411789;411790;411791;411792;411793;411794;411795;411796 324855;324856;324857;324858;324859;324860;324861;324862 324861 8 SSFSSDPDEK Unmodified 1097.4513 0.45129827 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.698 14.865 2 0.0040755 14276 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 74.165 72.299 106300000 0 0 0 6223300 5545100 7567200 6917800 6686000 7988300 9935500 11013000 12081000 10530000 9105500 12709000 49100 1492 44045 411797;411798;411799;411800;411801;411802;411803;411804;411805;411806;411807;411808 324863;324864;324865;324866;324867;324868;324869;324870;324871;324872 324870 10 SSFTVDCSK Unmodified 1029.4437 0.44371047 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25.961 25.222 2 0.00076164 31641 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.15 109.74 1803700000 50032000 1523700000 6774700 0 9604700 13805000 12815000 18917000 14183000 12634000 19714000 27934000 21202000 21743000 50607000 49101 1124 44046 411809;411810;411811;411812;411813;411814;411815;411816;411817;411818;411819;411820;411821;411822 324873;324874;324875;324876;324877;324878;324879;324880;324881 324875 6 SSFVPSLFSK Unmodified 1097.5757 0.57571092 1762 P55210 CASP7 Caspase-7;Caspase-7 subunit p20;Caspase-7 subunit p11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.532 80.593 2 0.0047747 92799 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 71.614 58.035 85143000 0 0 0 3421400 2306700 10970000 4331300 5052300 3397900 9114200 9874100 9136600 3748400 5301200 18489000 49102 1762 44047 411823;411824;411825;411826;411827;411828;411829;411830;411831;411832;411833;411834 324882;324883;324884;324885;324886;324887;324888;324889;324890;324891 324885 10 SSFYPDGGDQETAK Unmodified 1500.6369 0.63686721 4742 Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.632 36.813 2 0.00025238 40580 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 80.014 77.036 294050000 0 0 0 10830000 16185000 17283000 19410000 17927000 14038000 25638000 21419000 32741000 39713000 34000000 44866000 49103 4742 44048 411835;411836;411837;411838;411839;411840;411841;411842;411843;411844;411845;411846 324892;324893;324894;324895;324896;324897;324898;324899;324900;324901;324902;324903 324900 12 SSFYVNGLTLGGQK Unmodified 1469.7514 0.75144346 846 P07737 PFN1 Profilin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.818 76.878 2 6.9923E-14 88672 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 114.83 104.6 438830000 0 0 0 6505700 6488900 10127000 11871000 12610000 7220500 14609000 68054000 60162000 12065000 48071000 181050000 49104 846 44049 411847;411848;411849;411850;411851;411852;411853;411854;411855;411856;411857;411858 324904;324905;324906;324907;324908;324909;324910;324911;324912;324913;324914;324915;324916 324911 13 SSGAASSAPGGGDGAEYK Unmodified 1567.675 0.67504363 3997 Q96T37 RBM15 Putative RNA-binding protein 15 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 18.731 18.959 2 1.5009E-29 18893 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 113.24 107.39 75072000 0 0 0 0 4024800 4727700 6580200 6103200 8089200 8862700 5183000 9862500 6705400 4841300 10092000 49105 3997 44050 411859;411860;411861;411862;411863;411864;411865;411866;411867;411868;411869 324917;324918;324919;324920;324921;324922;324923;324924;324925;324926 324925 10 SSGADGGGGAAVAARSDK Acetyl (Protein N-term) 1574.7285 0.72847619 2731 Q5JPI9 METTL10 Protein-lysine N-methyltransferase METTL10 yes yes 1 0 1 By MS/MS 2 0 1 1 21.406 17.693 2 1.4172E-09 23280 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.96 59.587 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49106 2731 44051 411870 324927 324927 1 SSGAFWK Unmodified 781.37589 0.3758889 1185 P25311 AZGP1 Zinc-alpha-2-glycoprotein yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 39.458 38.972 2 0.039327 43611 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 69.093 69.093 52029000 0 0 0 43607000 8421900 0 0 0 0 0 0 0 0 0 0 49107 1185 44052 411871;411872 324928 324928 1 SSGASVTTQPTEFK Unmodified 1438.694 0.69398816 4243 Q9BY77 POLDIP3 Polymerase delta-interacting protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 39.372 39.143 2 4.1759E-52 48897 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 187.42 156.85 459370000 0 19858000 0 24701000 19138000 31631000 32557000 31554000 22857000 34648000 49132000 55813000 44766000 32524000 60188000 49108 4243 44053 411873;411874;411875;411876;411877;411878;411879;411880;411881;411882;411883;411884;411885 324929;324930;324931;324932;324933;324934;324935;324936;324937;324938;324939;324940;324941;324942 324933 14 SSGCDVNLPGVNVK Unmodified 1444.698 0.69802768 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 61.105 61.053 2 0.016809 69542 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 51.162 40.552 187910000 0 0 0 20301000 15603000 0 27759000 29370000 22456000 0 0 0 38668000 33755000 0 49109 2172 44054 411886;411887;411888;411889;411890;411891;411892 324943 324943 0 SSGCFPNMAAK Unmodified 1168.5005 0.50051385 3873 Q96I24 FUBP3 Far upstream element-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 40.048 40.217 2 0.013258 44662 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 60.019 49.309 90651000 0 0 0 5009300 3981000 4461700 6800500 4918100 7439800 6980200 11714000 12046000 9974800 0 17325000 49110 3873 44055 411893;411894;411895;411896;411897;411898;411899;411900;411901;411902;411903 324944;324945 324944 2 SSGDYSATFLPGLIPAEK Unmodified 1851.9254 0.92544466 3893 Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 88.17 88.278 2 0.0028662 102285 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 55.314 49.998 59329000 0 0 0 0 2771400 4508100 2311500 4653900 2719500 8730000 6697200 6948100 3422800 5151400 11415000 49111 3893 44056 411904;411905;411906;411907;411908;411909;411910;411911;411912;411913;411914 324946;324947;324948;324949;324950 324949 5 SSGEIVYCGQVFEK Unmodified 1601.7396 0.73955814 2078 Q02543 RPL18A 60S ribosomal protein L18a yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 65.224 65.38 2 0.00042449 82681 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.74 95.866 49193000 0 0 0 2556300 0 0 4351500 4176500 3238100 5437700 4323400 9744500 6411400 0 8953800 49112 2078 44057 411915;411916;411917;411918;411919;411920;411921;411922;411923;411924 324951;324952;324953;324954;324955;324956;324957;324958 324952 7 SSGFLNLIK Unmodified 977.55458 0.55458155 2833 Q5VZK9 LRRC16A Leucine-rich repeat-containing protein 16A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.33 3.77 5 10 2 1 2 1 1 1 1 1 1 1 1 1 1 82.084 81.092 2 0.0043999 92986 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 86.953 58.531 212900000 54204000 31402000 5638100 6007100 6005500 17279000 11226000 11851000 12513000 17366000 12160000 16032000 11221000 0 0 49113 2833 44058 411925;411926;411927;411928;411929;411930;411931;411932;411933;411934;411935;411936;411937;411938;411939 324959;324960;324961;324962;324963;324964;324965;324966;324967;324968;324969 324962 11 SSGGFVWACK Unmodified 1097.4964 0.49641475 1553 P48735 IDH2 Isocitrate dehydrogenase [NADP], mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 65.379 57.09 2 0.034896 76722 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.047 24.577 6370300 6370300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49114 1553 44059 411940 324970;324971 324970 2 SSGGGECTVSTQEHEAPGTFR Unmodified 2192.9393 0.9392736 3500 Q8TDB6 DTX3L E3 ubiquitin-protein ligase DTX3L yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 36.513 36.405 3 0.0070972 40276 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 23.601 14.782 10536000 0 0 0 0 3028800 4267000 0 0 3240700 0 0 0 0 0 0 49115 3500 44060 411941;411942;411943 324972;324973;324974 324972 3 SSGGGSSGSSSGSSIAQGGSAGSFK Unmodified 2089.9148 0.91483299 2541 Q15517 CDSN Corneodesmosin yes yes 0 0 0 By MS/MS 10 0 1 1 31.943 32.106 2 1.6671E-07 34962 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 70.783 57.646 6802800 0 0 0 0 0 0 0 6802800 0 0 0 0 0 0 0 49116 2541 44061 411944 324975 324975 1 SSGGREDLESSGLQR Unmodified 1576.7441 0.74412625 4956 Q9UK76 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 26.688 26.245 3 6.4851E-05 27371 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.11 84.957 96401000 0 0 12409000 2779200 0 0 0 0 2997900 0 0 0 5760200 0 72455000 49117 4956 44062 411945;411946;411947;411948;411949 324976;324977 324976 1 SSGGSEHSTEGSVSLGDGQLNR Unmodified 2159.9679 0.96793119 3029 Q71RC2 LARP4 La-related protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.157 39.338 3 4.8579E-16 43720 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 54.225 51.384 147470000 0 0 0 8947200 5171100 10738000 10620000 9992300 11313000 11152000 18806000 15232000 15289000 11938000 18271000 49118 3029 44063 411950;411951;411952;411953;411954;411955;411956;411957;411958;411959;411960;411961 324978;324979;324980;324981;324982;324983;324984;324985;324986;324987;324988;324989;324990;324991 324981 14 SSGGSSSGTITDEDELTGILK Unmodified 2052.9699 0.96988825 2857 Q68DC2 ANKS6 Ankyrin repeat and SAM domain-containing protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 79.325 79.345 2 1.7249E-19 92073 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 80.3 58.427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49119 2857 44064 411962;411963;411964;411965 324992;324993;324994;324995 324994 4 SSGGSYRDSYDSYATHNE Unmodified 1994.7878 0.78784156 2362 Q14011 CIRBP Cold-inducible RNA-binding protein yes yes 0 0 1 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 32.835 33.178 3 0.026544 36151 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 25.824 25.794 45392000 0 0 0 0 0 3577000 3842800 0 4962300 0 5588600 6821400 0 5697300 14902000 49120 2362 44065 411966;411967;411968;411969;411970;411971;411972 324996;324997 324996 2 SSGHSSSELSPDAVEK Unmodified 1615.7326 0.73255851 5066 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.561 27.759 3 3.5949E-05 30226 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 75.968 66.681 188800000 0 0 0 8529000 12831000 14985000 15501000 11238000 13726000 14845000 17516000 25975000 16337000 17028000 20289000 49121 5066 44066 411973;411974;411975;411976;411977;411978;411979;411980;411981;411982;411983;411984 324998;324999;325000;325001;325002;325003;325004;325005;325006;325007;325008;325009;325010 325010 12 SSGIHVALVTGGNK Acetyl (Protein N-term) 1380.7361 0.73612775 1033 P16152 CBR1 Carbonyl reductase [NADPH] 1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.4 3.86 5 2 8 2 4 1 1 1 1 1 1 1 1 1 66.805 64.342 2 0 81046 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 286.85 259.08 2009500000 434360000 1436900000 24502000 0 0 0 4783000 3534300 0 3913500 14349000 16190000 3852000 10901000 56141000 49122 1033 44067 411985;411986;411987;411988;411989;411990;411991;411992;411993;411994;411995;411996;411997;411998;411999 325011;325012;325013;325014;325015;325016;325017;325018;325019;325020;325021;325022;325023;325024;325025;325026;325027;325028;325029;325030 325014 20 SSGIHVALVTGGNK Unmodified 1338.7256 0.72556306 1033 P16152 CBR1 Carbonyl reductase [NADPH] 1 yes yes 0 0 0 By MS/MS 2 0 1 1 57.859 49.654 3 0.016349 67674 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 26.365 15.045 11338000 11338000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49123 1033 44067 412000 325031 325031 1 SSGISSQNSSTSDGDR Unmodified 1583.6659 0.66593551 4733 Q9NXV6 CDKN2AIP CDKN2A-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 8.4555 8.5842 2 2.7857E-31 6028 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 147.26 121.64 48171000 0 0 0 3067400 3114400 2533900 2539000 1712100 3025500 3336600 8457900 5996800 5492400 3069300 5825300 49124 4733 44068 412001;412002;412003;412004;412005;412006;412007;412008;412009;412010;412011;412012 325032;325033;325034;325035;325036;325037;325038 325034 7 SSGISSQNSSTSDGDRSVSSQSSSSVSSQVTTAGSGK Unmodified 3522.579 0.57897758 4733 Q9NXV6 CDKN2AIP CDKN2A-interacting protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.491 37.671 3 1.058E-87 41353 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 102.05 101.03 130240000 0 0 0 7072000 7556000 11471000 9924900 9451400 7296100 15574000 11332000 12753000 13212000 8585900 16011000 49125 4733 44069 412013;412014;412015;412016;412017;412018;412019;412020;412021;412022;412023;412024 325039;325040;325041;325042;325043;325044;325045;325046;325047;325048;325049;325050;325051;325052 325049 14 SSGLESSEAR Unmodified 1021.4676 0.46761704 3358 Q8N6H7 ARFGAP2 ADP-ribosylation factor GTPase-activating protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 10.099 10.239 2 0.0066055 9012 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 64.485 41.993 138680000 0 0 0 9321400 6324700 9072000 11347000 7361700 8273900 10163000 23043000 14639000 12614000 9420500 17096000 49126 3358 44070 412025;412026;412027;412028;412029;412030;412031;412032;412033;412034;412035;412036 325053;325054;325055;325056;325057;325058;325059;325060;325061;325062 325053 7 SSGLGTDVGSR Unmodified 1034.4993 0.49925152 634 O95248 SBF1 Myotubularin-related protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 21.475 21.765 2 0.018985 22098 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 43.297 16.695 63970000 0 0 0 0 12898000 0 0 0 0 0 21344000 29728000 0 0 0 49127 634 44071 412037;412038;412039 325063;325064 325064 2 SSGLPNIPVQTISR Unmodified 1467.8045 0.80454166 762 P02786 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.861 75.924 2 4.2662E-20 87898 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 142.1 117.24 504600000 0 0 0 25299000 39975000 37351000 39623000 37782000 34779000 36688000 52216000 72848000 40168000 37220000 50655000 49128 762 44072 412040;412041;412042;412043;412044;412045;412046;412047;412048;412049;412050;412051 325065;325066;325067;325068;325069;325070;325071;325072;325073;325074;325075;325076;325077 325074 13 SSGLSTPVPPSAGHLAHVR Unmodified 1868.9857 0.98569392 2839 Q63ZY3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 13 2 1 2 1 1 1 1 2 2 54.034 54.314 3;4 0.014234 60626 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 23.172 8.8628 88478000 0 0 0 0 0 12072000 4607700 9504700 7549300 7858800 10931000 7445100 0 13428000 15082000 49129 2839 44073 412052;412053;412054;412055;412056;412057;412058;412059;412060;412061;412062;412063;412064 325078;325079 325078 2 SSGMPTDQESLSSGDAVLQR Unmodified 2063.943 0.94296199 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 62.78 63.084 2 3.5393E-05 71988 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 68.83 66.691 29270000 0 0 0 0 0 0 4313400 2764300 0 0 0 6092600 6544100 0 9556100 49130 2193 44074 412065;412066;412067;412068;412069 325080;325081;325082 325080 3 SSGMPTDQESLSSGDAVLQR Oxidation (M) 2079.9379 0.93787661 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 1 0 By MS/MS By matching 10 0 2 1 1 53.376 54.032 2 7.1071E-15 60892 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 85.457 72.897 13366000 0 0 0 0 0 0 0 0 0 0 0 8734100 0 0 4631900 49131 2193 44074 412070;412071 325083 325083 3561 1 SSGNSPTPVSR Unmodified 1087.5258 0.52580062 660 O95429 BAG4 BAG family molecular chaperone regulator 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 11.54 11.604 2 0.031237 10621 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 38.303 24.724 4976400 0 0 0 0 886040 0 1044800 847140 719640 1478700 0 0 0 0 0 49132 660 44075 412072;412073;412074;412075;412076 325084;325085 325084 2 SSGNSSSSGSGSGSTSAGSSSPGAR Unmodified 2101.8744 0.87442473 2191 Q12797 ASPH Aspartyl/asparaginyl beta-hydroxylase yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 6.6304 6.7504 2 5.6874E-96 4945 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 183.23 177.95 74174000 0 0 0 4450600 5410100 6754600 4433700 5054700 0 7272400 7439500 10777000 7773500 7398100 7409100 49133 2191 44076 412077;412078;412079;412080;412081;412082;412083;412084;412085;412086;412087 325086;325087;325088 325087 3 SSGNSSSSGSGSGSTSAGSSSPGARR Unmodified 2257.9755 0.97553576 2191 Q12797 ASPH Aspartyl/asparaginyl beta-hydroxylase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 5.996 6.1134 3 1.2119E-19 4186 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 75.797 74.226 65177000 0 0 0 3413900 3718700 2107200 4748900 4012800 4384200 5126600 9318700 10568000 6050500 4889400 6838000 49134 2191 44077 412088;412089;412090;412091;412092;412093;412094;412095;412096;412097;412098;412099 325089;325090;325091;325092;325093;325094;325095;325096;325097;325098;325099;325100 325097 12 SSGPPPPSGSSGSEAAAGAGAAAPASQHPATGTGAVQTEAMK Oxidation (M) 3718.7129 0.71290906 2407 Q14444 CAPRIN1 Caprin-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.32 2.16 1 1 20 1 1 2 2 1 2 2 1 2 2 1 2 1 2 44.408 44.043 3;4 1.9677E-193 49427 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 144.18 139.46 767100000 514900 22788000 0 80087000 94830000 36469000 97754000 52468000 40899000 78320000 68762000 40380000 72770000 27943000 53110000 49135 2407 44078 412100;412101;412102;412103;412104;412105;412106;412107;412108;412109;412110;412111;412112;412113;412114;412115;412116;412117;412118;412119;412120;412121 325101;325102;325103;325104;325105;325106;325107;325108;325109;325110;325111;325112;325113;325114;325115;325116;325117;325118;325119;325120;325121;325122;325123;325124;325125;325126;325127;325128;325129;325130;325131;325132 325107 3949 32 SSGPPPPSGSSGSEAAAGAGAAAPASQHPATGTGAVQTEAMK Unmodified 3702.718 0.71799444 2407 Q14444 CAPRIN1 Caprin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.64 2.9 2 2 18 4 1 2 1 2 2 2 1 1 2 2 2 50.383 49.513 3;4 0 56035 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 212.49 205.02 758150000 0 106360000 0 37697000 70753000 32502000 63922000 92616000 58651000 21429000 44087000 0 53261000 80390000 96483000 49136 2407 44078 412122;412123;412124;412125;412126;412127;412128;412129;412130;412131;412132;412133;412134;412135;412136;412137;412138;412139;412140;412141;412142;412143 325133;325134;325135;325136;325137;325138;325139;325140;325141;325142;325143;325144;325145;325146;325147;325148;325149;325150;325151;325152;325153;325154;325155;325156;325157;325158;325159;325160;325161;325162;325163 325150 31 SSGPTSLFAVTVAPPGAR Unmodified 1713.905 0.90498399 2046 Q00839 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.32 2.18 2 1 31 1 2 2 3 2 2 2 4 2 3 3 2 3 3 84.806 84.502 2;3 7.2552E-98 97640 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 190.85 175.71 22943000000 28764000 1996800 0 938200000 2027300000 1915200000 1804400000 1793900000 1794800000 2630000000 2122900000 2638900000 1193500000 1670700000 2382300000 49137 2046 44079 412144;412145;412146;412147;412148;412149;412150;412151;412152;412153;412154;412155;412156;412157;412158;412159;412160;412161;412162;412163;412164;412165;412166;412167;412168;412169;412170;412171;412172;412173;412174;412175;412176;412177 325164;325165;325166;325167;325168;325169;325170;325171;325172;325173;325174;325175;325176;325177;325178;325179;325180;325181;325182;325183;325184;325185;325186;325187;325188;325189;325190;325191;325192;325193;325194;325195;325196;325197;325198;325199;325200;325201;325202;325203;325204;325205;325206;325207;325208;325209;325210;325211;325212;325213 325212 47 SSGPTSLFAVTVAPPGARQGQQQAGGK Unmodified 2596.3358 0.33576201 2046 Q00839 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 0 0 1 By MS/MS 2 0 1 1 83.694 75.563 3 7.1005E-07 98738 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.237 41.262 19006000 19006000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49138 2046 44080 412178 325214 325214 1 SSGPWNK Unmodified 774.36605 0.3660525 4980 Q9UKY7 CDV3 Protein CDV3 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 17.632 14.167 2 0.031292 20875 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.903 74.267 739490000 164990000 567840000 6656000 0 0 0 0 0 0 0 0 0 0 0 0 49139 4980 44081 412179;412180;412181;412182 325215;325216;325217 325217 1 SSGPYGGGGQYFAK Unmodified 1374.6204 0.62042929 891 P09651;Q32P51 HNRNPA1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 44.871 44.596 2 2.6295E-12 49978 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 104.39 94.441 1251700000 0 22125000 0 31967000 24151000 36938000 44762000 45911000 46286000 66271000 171260000 220690000 106960000 117540000 316870000 49140 891 44082 412183;412184;412185;412186;412187;412188;412189;412190;412191;412192;412193;412194;412195 325218;325219;325220;325221;325222;325223;325224;325225;325226;325227;325228;325229;325230;325231;325232;325233;325234;325235;325236 325228 19 SSGREEDDEELLR Unmodified 1533.6907 0.6906937 196 O14639 ABLIM1 Actin-binding LIM protein 1 yes yes 0 0 1 By matching By matching By MS/MS 10 0 3 1 1 1 32.414 32.911 3 0.030325 34915 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 31.215 21.222 14648000 0 0 0 0 0 0 2934000 0 0 0 0 4291700 0 0 7422000 49141 196 44083 412196;412197;412198 325237 325237 1 SSGRSDDNRESLEK Unmodified 1578.7234 0.72339081 1268 P30085 CMPK1 UMP-CMP kinase yes yes 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 7.3251 4.4588 3 0.0014491 6699 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 76.01 39.163 762140000 33341000 0 728800000 0 0 0 0 0 0 0 0 0 0 0 0 49142 1268 44084 412199;412200 325238;325239 325239 0 SSGSEGSSPNWLQALK Unmodified 1646.79 0.79001381 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 79.941 79.413 2 5.8783E-84 91604 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 185.18 170.49 326920000 0 66185000 0 0 9252600 18695000 15753000 23266000 16843000 32422000 33903000 25625000 29994000 17433000 37544000 49143 4285 44085 412201;412202;412203;412204;412205;412206;412207;412208;412209;412210;412211;412212;412213 325240;325241;325242;325243;325244;325245;325246;325247;325248;325249;325250;325251;325252;325253;325254;325255;325256 325250 17 SSGSETEQVVDFSDRETK Unmodified 1999.8971 0.89705766 635 O95251 KAT7 Histone acetyltransferase KAT7 yes yes 0 0 1 By matching By MS/MS By MS/MS 10 0 3 1 1 1 48.024 48.245 3 0.0008718 54243 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 48.288 43.85 20156000 0 0 0 0 0 3526300 0 0 0 9201600 7428200 0 0 0 0 49144 635 44086 412214;412215;412216 325257;325258 325257 2 SSGSGGGAHCGPGTGGFGSR Unmodified 1748.7285 0.72849296 96 CON__Q5XKE5;Q5XKE5 KRT79 Keratin, type II cytoskeletal 79 yes no 0 0 0 By MS/MS 10 0 1 1 19.675 19.529 3 1.8131E-05 19959 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 49.34 37.281 + 23546000 0 0 0 23546000 0 0 0 0 0 0 0 0 0 0 0 49145 96 44087 412217 325259 325259 1 SSGSHLVFVPSLR Unmodified 1384.7463 0.7462985 2385 Q14181 POLA2 DNA polymerase alpha subunit B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 73.143 73.252 3 6.7376E-05 84362 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 84.892 77.762 128770000 0 0 0 5503500 0 16188000 5790200 9534900 8613600 10428000 12390000 12859000 8884500 13235000 25342000 49146 2385 44088 412218;412219;412220;412221;412222;412223;412224;412225;412226;412227;412228 325260;325261;325262;325263;325264;325265;325266;325267;325268 325260 9 SSGSLGHRPSQEMDK Oxidation (M) 1630.7369 0.73693238 2759 Q5SW79 CEP170 Centrosomal protein of 170 kDa yes yes 0 1 1 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 6.6126 6.7596 3 0.00010233 4965 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 67.136 62.153 47119000 0 0 0 0 4441100 0 4777000 4360000 5107200 6503900 0 5166700 5578400 5335100 5849200 49147 2759 44089 412229;412230;412231;412232;412233;412234;412235;412236;412237 325269;325270;325271;325272;325273;325274 325272 4387 6 SSGSLGHRPSQEMDK Unmodified 1614.742 0.74201776 2759 Q5SW79 CEP170 Centrosomal protein of 170 kDa yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.251 12.4 3 0.0009104 10883 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.823 44.256 41931000 0 0 0 2952700 3170300 2927200 2788500 2774000 2360800 4503400 3267600 4591900 4481900 2613200 5499300 49148 2759 44089 412238;412239;412240;412241;412242;412243;412244;412245;412246;412247;412248;412249 325275;325276;325277;325278;325279;325280 325279 6 SSGSLLNNAIK Unmodified 1102.5982 0.59823728 740 P01023;P20742 A2M;PZP Alpha-2-macroglobulin;Pregnancy zone protein yes no 0 0 0 By MS/MS 10 0 1 1 50.175 50.34 2 0.00065051 56897 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 78.264 57.317 8194700 0 0 0 0 0 0 0 8194700 0 0 0 0 0 0 0 49149 740 44090 412250 325281 325281 1 SSGSPYGGGYGSGGGSGGYGSR Unmodified 1909.7827 0.7826966 1679 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.37 33.554 2 1.2138E-101 35862 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 169.92 162.55 232760000 0 0 0 7596500 6836700 10113000 9141700 7709500 7757200 17400000 31847000 36008000 25969000 20404000 51979000 49150 1679 44091 412251;412252;412253;412254;412255;412256;412257;412258;412259;412260;412261;412262 325282;325283;325284;325285;325286;325287;325288;325289;325290;325291;325292;325293 325285 12 SSGSSLFPR Unmodified 936.46649 0.46649483 4147 Q9BTK6 PAGR1 PAXIP1-associated glutamate-rich protein 1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS 10 0 4 1 1 1 1 42.992 43.123 2 0.043215 49265 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 43.734 31.541 27924000 0 0 0 4888600 0 0 0 0 0 0 8612600 0 8475000 5948100 0 49151 4147 44092 412263;412264;412265;412266 325294;325295 325295 1 SSGSSNEATITYDGSK Unmodified 1602.7009 0.70092403 5370 yes yes 0 0 0 By MS/MS 10 0 1 1 5.6646 5.739 3 0.013182 3621 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 39.685 24.523 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49152 5370 44093 412267 325296 325296 1 SSGSSSSGLGTVSNSPASQR Unmodified 1851.8559 0.85586154 5053 Q9UPP1 PHF8 Histone lysine demethylase PHF8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 29.905 30.24 2 1.0796E-37 31654 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 130.24 116.57 62634000 0 0 0 0 0 0 5530000 6925800 5041800 5100400 7501600 9781200 8145300 6643500 7964800 49153 5053 44094 412268;412269;412270;412271;412272;412273;412274;412275;412276;412277;412278 325297;325298;325299;325300;325301;325302;325303;325304;325305;325306 325299 10 SSGSVASLPQSDR Unmodified 1289.6212 0.62115757 456 O75122 CLASP2 CLIP-associating protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 30.665 30.897 2 2.012E-11 33502 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 119.53 93.59 69112000 0 0 0 9434100 0 0 0 6994900 6572100 9402000 9579000 15282000 11848000 0 0 49154 456 44095 412279;412280;412281;412282;412283;412284;412285 325307;325308;325309;325310;325311;325312;325313;325314 325307 8 SSGTASSVAFTPLQGLEIVNPQAAEK Unmodified 2601.3286 0.32861095 3579 Q8WWY3 PRPF31 U4/U6 small nuclear ribonucleoprotein Prp31 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 2 2 2 2 2 2 2 2 2 2 92.174 92.264 2;3 4.9489E-19 107113 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 47.806 43.5 184670000 0 0 0 1813300 8461800 7846400 5811600 12594000 9798500 33752000 22083000 23422000 0 14075000 45010000 49155 3579 44096 412286;412287;412288;412289;412290;412291;412292;412293;412294;412295;412296;412297;412298;412299;412300;412301;412302;412303;412304;412305;412306 325315;325316;325317;325318;325319;325320;325321;325322;325323;325324;325325;325326;325327;325328;325329;325330 325316 16 SSGTNFQGLPSK Unmodified 1221.599 0.59896556 2861 Q68EM7 ARHGAP17 Rho GTPase-activating protein 17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 41.279 40.536 2 2.6772E-05 44850 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 117.02 85.949 211910000 0 124970000 1742900 6335700 4399500 14434000 9891500 8670700 5237600 13673000 10478000 12078000 0 0 0 49156 2861 44097 412307;412308;412309;412310;412311;412312;412313;412314;412315;412316;412317 325331;325332;325333;325334;325335;325336;325337;325338;325339;325340 325338 9 SSGVPVDGFYTEEVR Unmodified 1640.7682 0.76821573 4125 Q9BSD7 NTPCR Cancer-related nucleoside-triphosphatase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.097 72.166 2 6.811E-05 83048 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 75.045 59.455 314830000 0 0 0 17493000 18356000 28276000 23699000 23576000 19101000 36990000 35201000 34319000 23477000 21821000 32522000 49157 4125 44098 412318;412319;412320;412321;412322;412323;412324;412325;412326;412327;412328;412329 325341;325342;325343;325344;325345;325346;325347;325348;325349;325350;325351;325352 325342 11 SSGVVPQSAPPVPTASSR Unmodified 1722.8901 0.89006221 1429 P41162 ETV3 ETS translocation variant 3 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 54.564 54.655 2 0.0086859 61519 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.825 35.98 27424000 0 0 0 0 5816300 0 5955800 9085300 0 0 0 0 0 0 6566500 49158 1429 44099 412330;412331;412332;412333 325353;325354 325354 1 SSHAVELACR Unmodified 1128.5346 0.53459117 4831 Q9UBB4 ATXN10 Ataxin-10 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 2 19.044 19.334 2 0.01862 20111 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 48.283 39.043 3823800 0 0 0 0 0 1041100 0 0 0 0 0 1785400 0 997260 0 49159 4831 44100 412334;412335;412336;412337;412338 325355;325356;325357;325358 325355 4 SSHDLLK Unmodified 798.42357 0.42356738 2982 Q6UX04 CWC27 Peptidyl-prolyl cis-trans isomerase CWC27 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 15.862 12.565 2 0.023131 16856 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.77 78.534 175530000 72112000 39276000 64144000 0 0 0 0 0 0 0 0 0 0 0 0 49160 2982 44101 412339;412340;412341 325359;325360 325359 1 SSHDRCLEK Unmodified 1130.5139 0.51385572 1446 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 4.0558 1.2908 2 1.8011E-06 5275 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 179.81 154.88 244150000 237650000 0 6496600 0 0 0 0 0 0 0 0 0 0 0 0 49161 1446 44102 412342;412343 325361;325362 325361 1 SSHLEETGSDSGTLLSTSSQASLAR Unmodified 2520.194 0.19396796 2776 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 60.556 60.733 3 5.4995E-41 68571 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.3 93.647 69049000 0 0 0 0 4711700 5973900 3612800 4308500 3084500 6967400 7769800 8066300 8393300 7187100 8973600 49162 2776 44103 412344;412345;412346;412347;412348;412349;412350;412351;412352;412353;412354 325363;325364;325365;325366;325367;325368;325369;325370;325371;325372;325373;325374 325366 12 SSHLEVSQASQLLQQQQQQQLR Unmodified 2563.3103 0.31027554 488 O75376 NCOR1 Nuclear receptor corepressor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 71.018 71.154 3 9.1262E-81 81048 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 148.26 139.87 114110000 0 0 0 0 5487600 8641900 5753600 8504700 8476300 13021000 10904000 15285000 8734800 9212900 20092000 49163 488 44104 412355;412356;412357;412358;412359;412360;412361;412362;412363;412364;412365 325375;325376;325377;325378;325379;325380;325381;325382;325383;325384;325385;325386;325387 325383 13 SSHNLAVHR Unmodified 1019.5261 0.52607539 3898 Q96JP5 ZFP91 E3 ubiquitin-protein ligase ZFP91 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.246 7.3648 2 0.005064 5560 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 84.743 58.141 47427000 0 0 0 2318200 2950100 4061900 3645900 2712500 4473500 0 10147000 2637000 5727800 3530900 5222400 49164 3898 44105 412366;412367;412368;412369;412370;412371;412372;412373;412374;412375;412376;412377 325388;325389;325390;325391;325392;325393;325394;325395;325396;325397 325390 10 SSHPEDLRAANK Unmodified 1323.6531 0.6531264 4950 Q9UJY5 GGA1 ADP-ribosylation factor-binding protein GGA1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By matching By matching 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 8.8283 8.7675 3 0.0077771 7266 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 46.592 34.016 73133000 0 0 41523000 1069900 972630 1494100 0 853740 1123600 1749800 15535000 3823200 755330 1441700 2791500 49165 4950 44106 412378;412379;412380;412381;412382;412383;412384;412385;412386;412387;412388;412389 325398;325399 325399 1 SSHRYFLER Unmodified 1193.5942 0.59415496 540 O75792 RNASEH2A Ribonuclease H2 subunit A yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 27.489 28.182 3 0.027738 29087 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.148 17.684 9384600 0 0 0 0 0 0 0 0 0 0 0 2437900 0 0 6946700 49166 540 44107 412390;412391 325400 325400 1 SSHSLPSEASSQPQVK Unmodified 1667.8115 0.81147753 327 O43426 SYNJ1 Synaptojanin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 28.485 28.775 3 0.0017841 31055 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 33.796 30.072 27956000 0 0 0 0 0 0 6099100 0 0 0 9936900 0 6112800 5807200 0 49167 327 44108 412392;412393;412394;412395 325401;325402;325403 325401 3 SSHSTWPVDVSQIK Unmodified 1569.7787 0.77872084 2927 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 67.45 67.388 3 0.0053804 77331 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 51.546 47.758 56057000 0 0 0 5020700 7055500 9286500 0 0 0 8760600 0 0 0 7822900 18111000 49168 2927 44109 412396;412397;412398;412399;412400;412401 325404;325405;325406;325407 325405 3 SSHTAVSDPSSTPTK Unmodified 1500.7056 0.70561548 291 O15516 CLOCK Circadian locomoter output cycles protein kaput yes yes 0 0 0 By MS/MS 2 0 1 1 15.03 11.689 3 0.004197 15601 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 29.618 12.893 7703600 0 7703600 0 0 0 0 0 0 0 0 0 0 0 0 0 49169 291 44110 412402 325408 325408 1 SSHYDELLAAEAR Unmodified 1460.6896 0.68957148 3039 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 53.082 53.195 3 0.0020873 59472 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 54.524 46.8 227600000 0 0 0 13168000 10246000 29957000 18359000 16857000 0 31185000 0 28112000 3259300 19302000 57154000 49170 3039 44111 412403;412404;412405;412406;412407;412408;412409;412410;412411;412412 325409;325410;325411;325412;325413;325414;325415;325416;325417 325415 9 SSIAGLLLK Unmodified 900.56442 0.56441796 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 78.025 78.042 2 0.0056908 90018 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 77.058 54.038 122380000 0 0 0 19390000 11185000 12171000 12868000 11149000 0 13580000 13219000 17499000 11315000 0 0 49171 2501 44112 412413;412414;412415;412416;412417;412418;412419;412420;412421 325418;325419;325420;325421;325422;325423;325424;325425 325421 8 SSIALTAPDAAADPK Unmodified 1426.7304 0.73037367 3444 Q8NFD5 ARID1B AT-rich interactive domain-containing protein 1B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 55.247 55.569 2 0.0012817 63161 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 67.456 42.602 65232000 0 0 0 0 0 0 7078800 0 10421000 0 10785000 36947000 0 0 0 49172 3444 44113 412422;412423;412424;412425;412426 325426;325427;325428;325429 325426 4 SSIAQRLK Unmodified 901.53451 0.53451481 2230 Q13057 COASY Bifunctional coenzyme A synthase;Phosphopantetheine adenylyltransferase;Dephospho-CoA kinase yes yes 0 0 1 By MS/MS 2 0 1 1 24.595 19.517 2 0.049312 27844 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 113.89 72.387 67934000 67934000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49173 2230 44114 412427 325430 325430 0 SSICLLR Unmodified 847.45857 0.45857268 2226 Q13042 CDC16 Cell division cycle protein 16 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 51.315 51.375 2 0.029815 57836 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 75.311 35.549 101530000 0 0 0 8302900 7301500 8659000 8172800 11109000 0 0 14025000 0 0 23038000 20925000 49174 2226 44115 412428;412429;412430;412431;412432;412433;412434;412435 325431 325431 1 SSIDSEPALVLGPLK Unmodified 1524.8399 0.83992412 1968 P69849;Q15155;Q5JPE7 NOMO3;NOMO1;NOMO2 Nodal modulator 3;Nodal modulator 1;Nodal modulator 2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.43 2.06 1 13 1 1 1 1 1 1 1 1 1 1 1 2 1 83.838 83.482 2 3.909E-07 103888 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.83 113.14 85269000 0 33677000 0 2288300 2405100 2395700 2510500 0 3733100 6495100 8320700 8326700 4104000 4591300 6421600 49175 1968 44116 412436;412437;412438;412439;412440;412441;412442;412443;412444;412445;412446;412447;412448;412449 325432;325433;325434;325435;325436;325437;325438;325439;325440;325441;325442;325443 325435 12 SSIDYQYQLLR Unmodified 1384.6987 0.69867961 4877 Q9UFF9 CNOT8 CCR4-NOT transcription complex subunit 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 72.855 72.97 2 0.00026679 83950 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 92.062 79.837 32314000 0 0 0 0 2774800 0 0 4142800 0 4914400 0 4253000 0 4497800 11731000 49176 4877 44117 412450;412451;412452;412453;412454;412455 325444;325445;325446;325447 325446 4 SSIFDADEEK Unmodified 1139.4982 0.49824846 4949 Q9UJY4 GGA2 ADP-ribosylation factor-binding protein GGA2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 42.742 42.509 2 0.0049444 47538 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 82.287 70.518 190590000 0 45172000 0 0 10271000 12274000 9834700 17249000 9760900 13324000 10165000 15611000 16128000 14560000 16239000 49177 4949 44118 412456;412457;412458;412459;412460;412461;412462;412463;412464;412465;412466;412467 325448;325449;325450;325451;325452;325453;325454;325455;325456;325457;325458 325456 11 SSIGTGYDLSASTFSPDGR Acetyl (Protein N-term) 1958.8858 0.88576469 1195 P25788 PSMA3 Proteasome subunit alpha type-3 yes yes 1 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.809 82.872 2 1.1965E-299 96054 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 249.32 222.62 186060000 0 0 0 5673400 4974400 4504800 3787000 7047600 3356000 8584600 32008000 27085000 4648200 18671000 65717000 49178 1195 44119 412468;412469;412470;412471;412472;412473;412474;412475;412476;412477;412478;412479 325459;325460;325461;325462;325463;325464;325465;325466;325467;325468 325464 10 SSIIPQDHHEVK Unmodified 1388.7048 0.70482762 3502 Q8TDJ6 DMXL2 DmX-like protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 29.307 26.153 3 0.039839 33120 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 28.789 20.879 13994000 0 0 13994000 0 0 0 0 0 0 0 0 0 0 0 0 49179 3502 44120 412480 325469 325469 1 SSIIVAADESTISWGPSPTFGELGYGDHK Unmodified 3020.4403 0.44034624 4806 Q9P258 RCC2 Protein RCC2 yes yes 0 0 0 By MS/MS 3 0 1 1 92.844 89.33 3 3.331E-07 91720 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 46.132 43.937 10154000 10154000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49180 4806 44121 412481 325470 325470 1 SSIIVAADESTISWGPSPTFGELGYGDHKPK Unmodified 3245.5881 0.58807311 4806 Q9P258 RCC2 Protein RCC2 yes yes 0 0 1 By MS/MS 2 0 1 1 92.528 84.398 4 2.8748E-11 109360 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.046 52.804 18570000 18570000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49181 4806 44122 412482 325471 325471 1 SSILAGGQPR Unmodified 984.53524 0.53524309 4245 Q9BYB4 GNB1L Guanine nucleotide-binding protein subunit beta-like protein 1 yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS 10 0 5 1 1 1 1 1 30.504 30.705 2 0.036868 32322 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.029 23.643 16612000 0 0 0 1682100 0 2618500 0 0 0 0 0 0 3141500 2981200 6188800 49182 4245 44123 412483;412484;412485;412486;412487 325472 325472 1 SSILLAEETPPEEPAAR Unmodified 1808.9156 0.91560825 4801 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.667 70.739 2 6.3061E-14 81445 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 118.48 101.85 46523000 0 0 0 2449900 2630500 5138100 4165500 2030400 2953700 3770200 4766300 4406300 3037100 4180900 6993700 49183 4801 44124 412488;412489;412490;412491;412492;412493;412494;412495;412496;412497;412498;412499 325473;325474;325475;325476;325477;325478;325479;325480;325481;325482;325483;325484;325485 325474 13 SSILLDVK Unmodified 873.51713 0.51713341 1255;1174 P29692;P24534 EEF1D;EEF1B2 Elongation factor 1-delta;Elongation factor 1-beta no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.561 60.665 2 0.047929 69320 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 47.657 15.592 100300000 0 0 0 2145700 2162600 12811000 3934100 2583400 4543600 7908100 11450000 11340000 4622700 9451700 27347000 49184 1255;1174 44125 412500;412501;412502;412503;412504;412505;412506;412507;412508;412509;412510;412511 325486 325486 1 SSILLDVKPWDDETDMAK Oxidation (M) 2077.9878 0.98778692 1174 P24534 EEF1B2 Elongation factor 1-beta yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.83 3.76 3 2 7 2 2 1 1 1 1 1 1 1 1 82.241 80.393 3 1.3742E-06 97880 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 92.633 89.021 713210000 187420000 321780000 86515000 1743200 3280500 0 3359700 6063900 0 16842000 0 0 0 12382000 73823000 49185 1174 44126 412512;412513;412514;412515;412516;412517;412518;412519;412520;412521;412522;412523 325487;325488;325489;325490;325491;325492;325493 325493 1701 5 SSILLDVKPWDDETDMAK Unmodified 2061.9929 0.9928723 1174 P24534 EEF1B2 Elongation factor 1-beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 2 3 2 87.64 82.778 2;3 3.2711E-106 104033 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 234.69 212.64 585060000 220910000 325250000 38902000 0 0 0 0 0 0 0 0 0 0 0 0 49186 1174 44126 412524;412525;412526;412527;412528;412529;412530 325494;325495;325496;325497;325498;325499 325494 3 SSILPFTPPIVK Acetyl (Protein N-term) 1339.7751 0.77513901 2010 P84022 SMAD3 Mothers against decapentaplegic homolog 3 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 97.291 97.362 2 0.0016299 113143 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.567 48.507 16625000 0 0 0 0 2135100 2721700 0 2216000 0 0 0 3753700 0 0 5798300 49187 2010 44127 412531;412532;412533;412534;412535 325500;325501;325502;325503;325504;325505 325501 6 SSILPFTPPVVK Acetyl (Protein N-term) 1325.7595 0.75948895 2579 Q15796 SMAD2 Mothers against decapentaplegic homolog 2 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 95.94 95.608 2 0.00031284 115253 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.913 60.799 282020000 0 64791000 0 6987900 19133000 16611000 16561000 16271000 0 29436000 24213000 22906000 15635000 18360000 31112000 49188 2579 44128 412536;412537;412538;412539;412540;412541;412542;412543;412544;412545;412546;412547 325506;325507;325508;325509;325510;325511;325512;325513;325514;325515;325516;325517;325518;325519;325520;325521 325510 16 SSILQAESK Unmodified 961.50803 0.50802529 4965 Q9UKG1 APPL1 DCC-interacting protein 13-alpha yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.31 3.1 1 2 10 3 1 1 1 1 1 1 1 1 1 1 27.413 27.229 2 0.0030831 34628 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 135.83 102.28 249210000 0 208060000 0 2523400 0 0 2716200 2081300 0 6284800 4185300 5987500 5447300 3936500 7978500 49189 4965 44129 412548;412549;412550;412551;412552;412553;412554;412555;412556;412557;412558;412559;412560 325522;325523;325524;325525;325526;325527;325528;325529;325530;325531 325524 9 SSILVQHQR Unmodified 1066.5883 0.5883413 1045 P17028 ZNF24 Zinc finger protein 24 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.296 18.451 2 0.0080683 18975 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 70.69 47.648 66220000 0 0 0 5617500 6994500 7687600 5310900 3547300 2940700 7999100 6287900 7914800 6436500 5482900 0 49190 1045 44130 412561;412562;412563;412564;412565;412566;412567;412568;412569;412570;412571;412572 325532;325533;325534;325535 325532 3 SSIRQVSDVQK Unmodified 1245.6677 0.66771383 2262 Q13263 TRIM28 Transcription intermediary factor 1-beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 6 2 2 2 23.194 19.239 2;3 0.00040412 27155 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.407 71.438 531730000 473130000 21963000 36639000 0 0 0 0 0 0 0 0 0 0 0 0 49191 2262 44131 412573;412574;412575;412576;412577;412578 325536;325537;325538 325536 1 SSIRVEEIIPAAR Unmodified 1439.8096 0.80962704 5061 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 67.604 67.92 3 0.0090681 77116 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.3 30.756 22772000 0 0 0 0 0 0 0 0 0 7973100 6750700 0 0 0 8048500 49192 5061 44132 412579;412580;412581;412582 325539;325540;325541 325539 3 SSISGSLPSSGSLQAVSSR Unmodified 1805.9119 0.91191986 4224 Q9BXF6 RAB11FIP5 Rab11 family-interacting protein 5 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 65.342 65.508 2 0.00031081 74451 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.622 34.337 28005000 0 0 0 3303300 0 0 2924100 1567700 0 0 4656000 7648300 0 2930900 4974300 49193 4224 44133 412583;412584;412585;412586;412587;412588;412589 325542;325543;325544;325545 325542 3 SSLAVRDPAMDR Acetyl (Protein N-term) 1358.6612 0.66124824 4333 Q9H0L4 CSTF2T Cleavage stimulation factor subunit 2 tau variant yes yes 1 0 1 By matching By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 53.559 53.332 2 0.015098 60464 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 43.512 15.77 18941000 0 0 0 2629300 2347200 0 3729300 0 0 0 0 0 0 10235000 0 49194 4333 44134 412590;412591;412592;412593 325546 325546 1 SSLDNIEMAYAR Unmodified 1368.6344 0.63436479 3311 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.296 68.373 2 1.1931E-05 78416 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 107.95 96.238 128210000 0 0 0 4594800 5453800 6055500 5914100 10538000 6796000 10956000 11113000 14960000 12517000 13617000 25689000 49195 3311 44135 412594;412595;412596;412597;412598;412599;412600;412601;412602;412603;412604;412605 325547;325548;325549;325550;325551;325552;325553 325549 7 SSLDNIEMAYAR Oxidation (M) 1384.6293 0.62927941 3311 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 60.612 60.704 2 0.0020324 69587 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 61.353 53.133 54061000 0 0 0 4518700 4731900 0 5978900 7782200 0 0 6793100 9473300 8596200 0 6186800 49196 3311 44135 412606;412607;412608;412609;412610;412611;412612;412613 325554;325555;325556;325557;325558;325559;325560 325557 4907 5 SSLDSNSSEMAIMMGADAK Unmodified 1943.8275 0.82746323 2830 Q5VZ89 DENND4C DENN domain-containing protein 4C yes yes 0 0 0 By MS/MS 2 0 1 1 80.11 75.398 2 3.7218E-20 93926 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.1 104.14 33949000 0 33949000 0 0 0 0 0 0 0 0 0 0 0 0 0 49197 2830 44136 412614 325561 325561 0 SSLEGPTILDIEK Unmodified 1400.7399 0.73987572 3050 Q7L576 CYFIP1 Cytoplasmic FMR1-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.467 78.524 2 7.7334E-07 90663 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 101.39 73.312 165010000 0 0 0 10869000 8556400 13102000 10019000 10164000 7834500 16881000 13457000 16065000 11330000 14388000 32341000 49198 3050 44137 412615;412616;412617;412618;412619;412620;412621;412622;412623;412624;412625;412626 325562;325563;325564;325565;325566;325567;325568;325569;325570;325571;325572;325573 325562 12 SSLEISSSCFSLETK Acetyl (Protein N-term) 1715.7924 0.79238158 713 O96007 MOCS2 Molybdopterin synthase catalytic subunit yes yes 1 0 0 By MS/MS 1 0 1 1 104.26 109.52 2 1.8069E-50 89797 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 162.68 137.3 5837500 5837500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49199 713 44138 412627 325574 325574 1 SSLELEVGEIASDGSMPTNK Unmodified 2062.9729 0.97286514 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By MS/MS 2 0 1 1 85.419 80.645 2 5.8263E-08 100372 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.47 116.92 20375000 0 20375000 0 0 0 0 0 0 0 0 0 0 0 0 0 49200 3023 44139 412628 325575 325575 0 SSLENEPSLGR Unmodified 1187.5782 0.57823012 2713 Q56NI9 ESCO2 N-acetyltransferase ESCO2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 37.091 37.573 2 0.0049396 41511 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 72.928 50.797 33853000 0 0 0 0 0 0 0 0 0 7001000 8706300 12219000 0 1488000 4438600 49201 2713 44140 412629;412630;412631;412632;412633 325576 325576 1 SSLENPEHDESGALVLPR Unmodified 1948.949 0.94903365 4085 Q9BQ50 TREX2 Three prime repair exonuclease 2 yes yes 0 0 0 By MS/MS 10 0 1 1 64.943 64.25 3 2.5169E-15 74224 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 95.767 76.095 26540000 0 0 0 26540000 0 0 0 0 0 0 0 0 0 0 0 49202 4085 44141 412634 325577;325578 325578 2 SSLGASFVQIK Acetyl (Protein N-term) 1177.6343 0.63428844 4745 Q9NYL2 ZAK Mitogen-activated protein kinase kinase kinase MLT yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 83.196 83.274 2 0.0071098 95536 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 57.032 25.803 47359000 0 0 0 0 3412700 5485600 6817700 4817600 4665200 6979400 0 0 8934900 6245700 0 49203 4745 44142 412635;412636;412637;412638;412639;412640;412641;412642 325579;325580 325580 2 SSLGDMFSPIRDDAVVNK Oxidation (M) 1965.9466 0.94659081 3460 Q8NHV4 NEDD1 Protein NEDD1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 69.746 69.904 3 0.002581 80218 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 43.408 32.62 44094000 0 0 0 0 3174100 0 4313500 0 6648500 0 6324000 7292500 4788400 3604200 7948600 49204 3460 44143 412643;412644;412645;412646;412647;412648;412649;412650 325581 325581 4991 0 SSLGNDETDK Unmodified 1064.4622 0.46219731 457 O75128 COBL Protein cordon-bleu yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 7.6742 7.7182 2 0.020509 5939 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 47.198 37.984 7530700 0 0 0 713320 822110 1469900 1402800 915440 1670800 0 0 0 0 536430 0 49205 457 44144 412651;412652;412653;412654;412655;412656;412657 325582;325583 325582 2 SSLGPVGLDK Unmodified 971.52876 0.52876073 1067 P17987 TCP1 T-complex protein 1 subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.42 3.09 3 2 19 2 2 1 1 1 2 1 1 1 2 2 2 2 2 2 48.822 47.844 1;2 0.00016695 58867 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 119.75 90.371 6238900000 208090000 4066700000 123770000 66892000 68997000 178590000 106740000 77767000 75428000 173750000 212920000 213440000 145860000 165360000 354530000 49206 1067 44145 412658;412659;412660;412661;412662;412663;412664;412665;412666;412667;412668;412669;412670;412671;412672;412673;412674;412675;412676;412677;412678;412679;412680;412681 325584;325585;325586;325587;325588;325589;325590;325591;325592;325593;325594;325595;325596;325597;325598;325599;325600;325601 325596 8 SSLGQSASETEEDTVSVSK Unmodified 1939.8858 0.88582427 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 44.686 44.858 2 1.3415E-177 49708 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 274.45 267.57 377530000 0 0 0 20836000 17749000 32111000 23852000 21138000 24775000 30144000 43280000 43409000 52533000 33125000 34582000 49207 2290 44146 412682;412683;412684;412685;412686;412687;412688;412689;412690;412691;412692;412693 325602;325603;325604;325605;325606;325607;325608;325609;325610;325611;325612;325613;325614 325611 13 SSLGQSASETEEDTVSVSKK Unmodified 2067.9808 0.98078729 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 38.968 39.483 3 0.00054434 42770 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 40.642 32.745 14685000 0 0 0 0 0 0 0 0 0 0 0 0 0 6500200 8185000 49208 2290 44147 412694;412695;412696 325615;325616;325617 325616 3 SSLGSHQLPR Unmodified 1080.5676 0.56760585 694 O95817 BAG3 BAG family molecular chaperone regulator 3 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 23.974 24.392 2 0.0021721 24525 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.862 62.791 56276000 0 0 0 0 0 0 9197600 0 0 0 6134800 12442000 5547200 7893600 15061000 49209 694 44148 412697;412698;412699;412700;412701;412702 325618;325619;325620 325619 2 SSLIILK Unmodified 772.50584 0.50584045 1228 P28066 PSMA5 Proteasome subunit alpha type-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 64.188 62.638 2 0.016439 78367 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 118.01 19.596 4910500000 3183800000 596090000 304530000 52724000 905200 56761000 42606000 37516000 23873000 62105000 100200000 126760000 45650000 68019000 208930000 49210 1228 44149 412703;412704;412705;412706;412707;412708;412709;412710;412711;412712;412713;412714;412715;412716;412717;412718;412719 325621;325622;325623;325624;325625;325626;325627;325628;325629;325630;325631;325632;325633 325629 13 SSLINGLVGR Unmodified 1014.5822 0.58219329 1382 P36915 GNL1 Guanine nucleotide-binding protein-like 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 68.391 68.352 2 0.014408 78393 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 50.703 12.57 15023000 0 0 0 1547700 1151500 0 2163200 1435900 0 3499000 2271900 0 2954200 0 0 49211 1382 44150 412720;412721;412722;412723;412724;412725;412726 325634 325634 1 SSLINGLVGRK Unmodified 1142.6772 0.6771563 1382 P36915 GNL1 Guanine nucleotide-binding protein-like 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 54.855 55.144 3 0.0094869 61803 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 31.185 24.526 44061000 0 0 0 0 0 4416900 2643200 3033600 0 4646900 3768100 9782200 4399400 2822300 8548300 49212 1382 44151 412727;412728;412729;412730;412731;412732;412733;412734;412735 325635;325636;325637 325637 3 SSLINSLK Unmodified 860.49673 0.49673232 4674 Q9NVN8 GNL3L Guanine nucleotide-binding protein-like 3-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.33 2.98 5 1 2 2 1 1 53.936 48.652 2 0.010495 67667 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 133.79 0 206400000 109110000 63495000 2837100 0 0 0 0 30962000 0 0 0 0 0 0 0 49213 4674 44152 412736;412737;412738;412739;412740;412741 325638;325639;325640;325641;325642 325640 4 SSLLAVSNK Unmodified 917.5182 0.51819605 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.116 38.296 2 0.0036211 42509 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 95.358 61.62 149450000 0 0 0 6216300 7961400 11777000 9222900 10360000 8026900 12533000 15570000 22390000 17603000 12767000 15027000 49214 1364 44153 412742;412743;412744;412745;412746;412747;412748;412749;412750;412751;412752;412753 325643;325644;325645;325646;325647;325648;325649;325650 325647 8 SSLLDDLLTESEDMAQR Oxidation (M) 1937.8888 0.88880116 154 O00429 DNM1L Dynamin-1-like protein yes yes 0 1 0 By MS/MS 10 0 1 1 92.426 92.545 2 4.0563E-05 107534 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 75.479 63.946 2102300 0 0 0 0 0 0 0 0 0 2102300 0 0 0 0 0 49215 154 44154 412754 325651 325651 220 1 SSLLDDLLTESEDMAQRRK Unmodified 2206.09 0.089960579 154 O00429 DNM1L Dynamin-1-like protein yes yes 0 0 2 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 97.546 92.165 3;4 5.2883E-17 115946 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 111.06 102.27 45224000 21918000 23305000 0 0 0 0 0 0 0 0 0 0 0 0 0 49216 154 44155 412755;412756;412757 325652;325653 325653 2 SSLLDVLAAR Unmodified 1043.5975 0.597509 5039 Q9UNQ0 ABCG2 ATP-binding cassette sub-family G member 2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 85.128 85.258 2 0.037846 98516 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.724 15.83 7146400 0 0 0 0 0 0 0 0 0 0 0 0 3629800 0 3516600 49217 5039 44156 412758;412759 325654 325654 1 SSLLIEQPVK Unmodified 1112.6441 0.64412484 3419 Q8NDX5 PHC3 Polyhomeotic-like protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.691 59.8 2 0.0060165 68303 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 66.621 53.584 85594000 0 0 0 4330500 5519300 5156300 5878200 5238800 5143100 8116600 9197300 9515100 9544600 7822000 10132000 49218 3419 44157 412760;412761;412762;412763;412764;412765;412766;412767;412768;412769;412770;412771 325655;325656;325657;325658;325659;325660;325661;325662;325663;325664 325660 9 SSLLTEK Unmodified 776.42798 0.42798405 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 23.783 23.947 2 0.04393 24500 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 67.032 26.929 102860000 0 0 0 2863900 5066700 9519000 7736800 6311400 4495000 12901000 15152000 14915000 12206000 11692000 0 49219 3119 44158 412772;412773;412774;412775;412776;412777;412778;412779;412780;412781;412782 325665 325665 1 SSLLTELSNSLTK Unmodified 1391.7508 0.75077476 4845 Q9UBK9 UXT Protein UXT yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 92.51 87.83 2 3.6554E-36 110444 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 180.19 168.56 128350000 54325000 69606000 4417600 0 0 0 0 0 0 0 0 0 0 0 0 49220 4845 44159 412783;412784;412785;412786 325666;325667;325668;325669 325666 4 SSLLVGNLK Unmodified 929.55458 0.55458155 3261 Q8IXK0 PHC2 Polyhomeotic-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 57.317 57.682 2 0.0047531 65961 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 85.813 50.517 25612000 0 0 0 0 0 0 4357900 8408200 0 0 0 6186000 0 0 6659400 49221 3261 44160 412787;412788;412789;412790;412791;412792;412793;412794 325670;325671;325672;325673;325674;325675;325676;325677 325675 8 SSLNPILFR Unmodified 1045.592 0.59202969 1403 P39656 DDOST Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.423 76.481 2 0.0050309 88203 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 84.916 57.033 143900000 0 0 0 15397000 8772300 9275900 11824000 14246000 9823300 10768000 10723000 18842000 12174000 9949500 12110000 49222 1403 44161 412795;412796;412797;412798;412799;412800;412801;412802;412803;412804;412805;412806 325678;325679;325680;325681;325682;325683;325684 325679 7 SSLNSQQPTEEK Unmodified 1346.6314 0.6313879 522 O75592 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.186 14.349 2 0.0059177 13531 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 52.725 36.094 101510000 0 0 0 2242800 7828700 18037000 10188000 13139000 8628700 19517000 3272700 5547000 3738200 3946400 5420500 49223 522 44162 412807;412808;412809;412810;412811;412812;412813;412814;412815;412816;412817;412818 325685;325686;325687;325688;325689 325688 5 SSLPEGIRPGTVLR Unmodified 1480.8362 0.83617614 1530 P47929 LGALS7 Galectin-7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.188 63.283 3 0.0010306 72178 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 67.997 59.893 871300000 0 0 0 443820000 23596000 29711000 33903000 177450000 11573000 35584000 29179000 33337000 22353000 16365000 14425000 49224 1530 44163 412819;412820;412821;412822;412823;412824;412825;412826;412827;412828;412829;412830 325690;325691;325692;325693;325694;325695;325696;325697 325694 6 SSLPLDHGSPAQENPESEK Unmodified 2020.9338 0.93377751 2830 Q5VZ89 DENND4C DENN domain-containing protein 4C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.457 41.636 3 2.5461E-17 45304 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.842 62.588 325880000 0 0 0 18557000 18162000 21382000 23600000 29539000 23260000 23326000 31958000 36861000 41036000 24559000 33637000 49225 2830 44164 412831;412832;412833;412834;412835;412836;412837;412838;412839;412840;412841;412842 325698;325699;325700;325701;325702;325703;325704;325705;325706;325707;325708;325709;325710;325711;325712 325703 15 SSLPNFK Unmodified 791.41775 0.41775372 5032 Q9UNH7 SNX6 Sorting nexin-6;Sorting nexin-6, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42.62 41.535 2 0.027575 47012 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 77.374 48.064 552760000 75166000 293430000 9550100 9956100 8084100 20367000 16016000 10296000 8713500 19706000 19102000 16824000 0 17049000 28497000 49226 5032 44165 412843;412844;412845;412846;412847;412848;412849;412850;412851;412852;412853;412854;412855;412856 325713;325714;325715;325716 325716 4 SSLQQPSLK Unmodified 986.53966 0.53965977 2970 Q6T4R5 NHS Nance-Horan syndrome protein yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 31.673 31.838 2 0.005211 34574 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 80.165 48.862 52081000 0 0 0 5613300 2623100 6158600 5288000 4067600 0 0 0 9001500 5441000 4510000 9378400 49227 2970 44166 412857;412858;412859;412860;412861;412862;412863;412864;412865 325717;325718;325719;325720;325721 325720 5 SSLQSQCLNEVLK Unmodified 1504.7555 0.75554256 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.024 66.108 2 5.58E-14 75853 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 143.5 123.74 315830000 0 0 0 15372000 17824000 25188000 15357000 24620000 14054000 27707000 34956000 39399000 25230000 32642000 43476000 49228 2392 44167 412866;412867;412868;412869;412870;412871;412872;412873;412874;412875;412876;412877 325722;325723;325724;325725;325726;325727;325728;325729;325730;325731;325732 325725 9 SSLQYSSPAPDGCGDQTLGDLLLTPTR Unmodified 2848.3549 0.35490205 1134 P22102 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 2 1 1 2 88.988 89.121 2;3 5.9131E-42 103134 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 92.198 85.694 56348000 0 0 0 0 0 2426900 0 0 1313100 10239000 5489100 0 0 4047100 32833000 49229 1134 44168 412878;412879;412880;412881;412882;412883;412884;412885;412886 325733;325734;325735;325736;325737;325738;325739;325740;325741 325736 9 SSLSCSLQEGLIPGSQFWDASK Unmodified 2396.1318 0.13182539 1694 P52701 MSH6 DNA mismatch repair protein Msh6 yes yes 0 0 0 By MS/MS 2 0 1 1 96.504 91.682 2 6.2567E-13 113622 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.007 83.654 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49230 1694 44169 412887 325742 325742 1 SSLSDEAPVLPNTTPDLLLATTAK Unmodified 2453.2901 0.29010018 3838 Q96FS4 SIPA1 Signal-induced proliferation-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 91.929 91.454 3 0.018069 112746 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 23.063 9.8755 29103000 0 15199000 0 0 0 0 0 1011400 1095700 2474700 1611900 2219000 0 1537500 3954000 49231 3838 44170 412888;412889;412890;412891;412892;412893;412894;412895 325743;325744;325745 325745 3 SSLSDSLVCISEK Unmodified 1423.6865 0.68645994 2859 Q68DQ2 CRYBG3 Very large A-kinase anchor protein yes yes 0 0 0 By MS/MS 3 0 1 1 84.05 80.799 3 0.02197 96755 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 27.409 19.105 7596100 0 7596100 0 0 0 0 0 0 0 0 0 0 0 0 0 49232 2859 44171 412896 325746 325746 1 SSLSNNECGSLDK Unmodified 1409.6093 0.60927225 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 22.986 23.228 2 2.1324E-13 23010 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 164.43 145.65 103280000 0 0 0 8359300 9653900 0 8064200 9661400 0 0 7578600 16335000 15190000 13321000 15119000 49233 2804 44172 412897;412898;412899;412900;412901;412902;412903;412904;412905;412906 325747;325748;325749;325750;325751;325752;325753;325754;325755;325756 325752 10 SSLSSAQADFNQLAELDR Unmodified 1950.9283 0.92829821 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 83.25 83.379 2 5.4413E-47 96210 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 152.99 130.11 20696000 0 0 0 0 0 2647200 0 2954700 0 0 0 0 0 4144300 10950000 49234 2344 44173 412907;412908;412909;412910;412911 325757;325758;325759 325759 3 SSLSSHSHQSQIYR Unmodified 1615.7703 0.77028142 242 O15027 SEC16A Protein transport protein Sec16A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 16.091 16.298 3 0.0022094 16785 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 48.112 40.746 102610000 0 0 0 4242600 0 8512000 6482400 7918700 4088500 6481600 8263200 17721000 11279000 11370000 16248000 49235 242 44174 412912;412913;412914;412915;412916;412917;412918;412919;412920;412921;412922 325760;325761;325762;325763 325760 2 SSLSVPYVIVPLK Unmodified 1400.8279 0.82790287 741 P01024 C3 Complement C3;Complement C3 beta chain;C3-beta-c;Complement C3 alpha chain;C3a anaphylatoxin;Acylation stimulating protein;Complement C3b alpha' chain;Complement C3c alpha' chain fragment 1;Complement C3dg fragment;Complement C3g fragment;Complement C3d fragment;Complement C3f fragment;Complement C3c alpha' chain fragment 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 90.384 89.433 2 0.0032643 103401 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 54.608 49.995 31203000 0 15346000 0 1342200 0 0 0 8261400 0 3834500 0 0 0 0 2418400 49236 741 44175 412923;412924;412925;412926;412927 325764;325765;325766 325766 3 SSLSVQPGFLADLNR Unmodified 1602.8366 0.83657007 3025 Q70E73 RAPH1 Ras-associated and pleckstrin homology domains-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 84.781 84.887 2 3.8327E-19 97554 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 122.51 107.12 62478000 0 0 0 0 2858500 5536800 3377300 5839100 5014300 5618800 5333200 7607000 3211700 5357600 12724000 49237 3025 44176 412928;412929;412930;412931;412932;412933;412934;412935;412936;412937;412938 325767;325768;325769;325770;325771;325772;325773;325774 325771 8 SSLTIQFVEGQFVDSYDPTIENTFTK Unmodified 2965.4233 0.42329919 2524 Q15382 RHEB GTP-binding protein Rheb yes yes 0 0 0 By MS/MS 2 0 2 2 98.062 89.931 3 6.4271E-39 115852 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 112.88 106.3 79169000 79169000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49238 2524 44177 412939;412940 325775;325776 325775 2 SSLTQEEAPVSWEK Unmodified 1589.7573 0.7573167 3037 Q76L83 ASXL2 Putative Polycomb group protein ASXL2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 61.424 61.517 2 0.0012757 70402 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 75.819 67.99 48085000 0 0 0 2973900 2295000 3783700 2900800 0 3523000 4405100 5986700 6868700 4800700 5607300 4939900 49239 3037 44178 412941;412942;412943;412944;412945;412946;412947;412948;412949;412950;412951 325777;325778;325779;325780;325781;325782;325783;325784 325777 8 SSLTQHSWQSLK Unmodified 1400.7048 0.70482762 4739 Q9NYB0 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 45.661 45.847 3 0.00045625 50760 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.161 51.111 77078000 0 0 0 0 3504600 4325700 6898500 7747800 6207200 7297900 8538200 14181000 10625000 7752400 0 49240 4739 44179 412952;412953;412954;412955;412956;412957;412958;412959;412960;412961 325785;325786;325787;325788;325789 325789 5 SSLVTPSISK Unmodified 1017.5706 0.57062555 2818 Q5VUA4 ZNF318 Zinc finger protein 318 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 45.173 45.354 2 0.0067265 50934 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 64.191 41.699 50940000 0 0 0 3834600 4151700 0 3806600 5829700 3636700 4302800 4830500 6552800 3782400 3810400 6401600 49241 2818 44180 412962;412963;412964;412965;412966;412967;412968;412969;412970;412971;412972 325790;325791;325792 325790 3 SSLYEQMGDHK Unmodified 1293.566 0.56595087 5245 Q9Y5Q9 GTF3C3 General transcription factor 3C polypeptide 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 2 2 2 2 1 1 1 2 2 2 31.855 32.032 2;3 0.00026893 35118 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 91.087 75.425 183800000 0 0 0 7165300 17356000 19713000 15739000 0 15168000 13443000 12216000 14453000 21963000 19468000 27118000 49242 5245 44181 412973;412974;412975;412976;412977;412978;412979;412980;412981;412982;412983;412984;412985;412986;412987;412988;412989;412990 325793;325794;325795;325796;325797;325798;325799 325793 7 SSMAPSQPEESDVFLRAPFTK Oxidation (M) 2339.1104 0.11036167 3011 Q6ZSR9 Uncharacterized protein FLJ45252 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 78.078 77.928 3 1.0722E-11 89565 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 78.987 74.334 97316000 0 0 11717000 0 0 11036000 9174000 7723200 10619000 0 0 13266000 8726200 9225100 15830000 49243 3011 44182 412991;412992;412993;412994;412995;412996;412997;412998;412999 325800;325801;325802;325803;325804;325805;325806;325807;325808;325809;325810;325811 325805 4617 11 SSMAPSQPEESDVFLRAPFTK Unmodified 2323.1154 0.11544705 3011 Q6ZSR9 Uncharacterized protein FLJ45252 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 84.412 80.794 3 0.0082038 97547 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 32.156 29.274 25707000 0 20019000 5687700 0 0 0 0 0 0 0 0 0 0 0 0 49244 3011 44182 413000;413001 325812 325812 1 SSMAVHSLFK Unmodified 1105.559 0.559015 2995 Q6YHK3 CD109 CD109 antigen yes yes 0 0 0 By MS/MS 10 0 1 1 49.039 49.762 2 0.019579 55296 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.732 19.558 18753000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18753000 49245 2995 44183 413002 325813 325813 1 SSMNPEYDYLFK Acetyl (Protein N-term);Oxidation (M) 1550.6599 0.65991084 1911 P62820 RAB1A Ras-related protein Rab-1A yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.31 2.4 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 84.173 84.635 2 1.7963E-05 95847 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 86.624 79.771 377980000 23343000 0 0 10087000 20188000 21310000 31151000 31349000 19105000 39427000 37024000 41017000 30760000 26236000 46983000 49246 1911 44184 413003;413004;413005;413006;413007;413008;413009;413010;413011;413012;413013;413014;413015 325814;325815;325816;325817;325818;325819;325820;325821;325822;325823;325824;325825;325826;325827 325824 3089 14 SSMNPEYDYLFK Acetyl (Protein N-term) 1534.665 0.66499622 1911 P62820 RAB1A Ras-related protein Rab-1A yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.47 2 9 1 1 1 1 1 1 1 1 1 1 1 90.4 90.99 2 5.23E-05 97914 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 96.342 87.761 142740000 26823000 24811000 0 2339100 5951500 5934600 5772200 13456000 0 14129000 0 10315000 7308300 0 25902000 49247 1911 44184 413016;413017;413018;413019;413020;413021;413022;413023;413024;413025;413026 325828;325829;325830;325831;325832;325833;325834;325835;325836;325837 325834 10 SSMNVDEAFSSLAR Oxidation (M) 1528.6828 0.68277155 1649 P51153 RAB13 Ras-related protein Rab-13 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.833 68.912 2 3.998E-17 78441 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 123.67 117.37 149080000 0 0 0 8830400 11668000 10583000 11669000 9750700 10381000 11908000 16495000 18484000 14011000 12636000 12661000 49248 1649 44185 413027;413028;413029;413030;413031;413032;413033;413034;413035;413036;413037;413038 325838;325839;325840;325841;325842;325843;325844;325845;325846;325847;325848;325849;325850;325851 325843 2660 14 SSMNVDEAFSSLAR Unmodified 1512.6879 0.68785692 1649 P51153 RAB13 Ras-related protein Rab-13 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.015 79.105 2 6.1424E-19 90642 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 163.12 152.37 145050000 0 0 0 5213700 0 10191000 8259900 15004000 7954900 14663000 17592000 19825000 10144000 10698000 25500000 49249 1649 44185 413039;413040;413041;413042;413043;413044;413045;413046;413047;413048;413049 325852;325853;325854;325855;325856;325857;325858;325859;325860;325861;325862 325858 10 SSMPWNK Oxidation (M) 864.37999 0.379988 2168 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 0 1 0 By matching By MS/MS 2 0 2 1 1 20.753 16.555 2 0.020197 21420 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.27 69.775 138210000 2676600 135540000 0 0 0 0 0 0 0 0 0 0 0 0 0 49250 2168 44186 413050;413051 325863;325864 325864 3486 2 SSMPWNK Unmodified 848.38507 0.38507338 2168 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36.665 35.792 2 0.022596 49287 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 106.76 95.199 401250000 100410000 193900000 5443800 5570100 4236200 7948200 4616600 3842300 3815700 9150800 10998000 11210000 7440900 9832400 22833000 49251 2168 44186 413052;413053;413054;413055;413056;413057;413058;413059;413060;413061;413062;413063;413064;413065;413066 325865;325866;325867;325868 325867 4 SSNASETEPNAIK Unmodified 1346.6314 0.6313879 2561 Q15652 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 19.75 19.933 2 0.00075647 20374 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 70.977 59.813 39752000 0 0 0 0 3572500 4025900 0 4710100 4132100 6638100 0 0 5126800 4237500 7308800 49252 2561 44187 413067;413068;413069;413070;413071;413072;413073;413074 325869;325870;325871;325872;325873;325874;325875 325873 7 SSNECFK Acetyl (Protein N-term) 912.36473 0.36473187 1903 P62633 CNBP Cellular nucleic acid-binding protein yes yes 1 0 0 By MS/MS 1 0 1 1 97.755 103.02 2 0.019852 81753 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 64.803 35.465 3231500 3231500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49253 1903 44188 413075 325876 325876 1 SSNEFMR Unmodified 869.37015 0.3701516 4669 Q9NVI1 FANCI Fanconi anemia group I protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 22.278 22.542 2 0.023406 23559 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 86.866 45.564 57412000 0 0 0 0 2652100 0 3290700 5057400 2308300 5370300 7630400 7084700 5704200 6767100 11547000 49254 4669 44189 413076;413077;413078;413079;413080;413081;413082;413083;413084;413085 325877;325878;325879;325880;325881 325881 5 SSNLLDLK Unmodified 888.49165 0.49164694 3190 Q86X55 CARM1 Histone-arginine methyltransferase CARM1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.609 55.739 2 0.0095736 63558 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 82.452 25.172 262270000 0 0 0 13517000 9576400 24232000 18747000 21916000 12826000 30114000 21813000 28354000 19035000 23287000 38852000 49255 3190 44190 413086;413087;413088;413089;413090;413091;413092;413093;413094;413095;413096;413097 325882;325883;325884 325882 3 SSNLRNLEISQQK Unmodified 1515.8005 0.80051892 4421 Q9H6S0 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 yes yes 0 0 1 By MS/MS 2 0 1 1 45.042 38.176 3 0.0010203 52375 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.271 68.155 51296000 51296000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49256 4421 44191 413098 325885 325885 1 SSNLSVTTDFSESLQSSNIESK Unmodified 2359.1027 0.10269334 3573 Q8WWI1 LMO7 LIM domain only protein 7 yes yes 0 0 0 By MS/MS By MS/MS 2.6 0.49 2 3 2 3 81.163 77.125 2;3 3.091E-114 96046 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 236.43 215.37 58980000 2935300 56044000 0 0 0 0 0 0 0 0 0 0 0 0 0 49257 3573 44192 413099;413100;413101;413102;413103 325886;325887;325888;325889 325887 4 SSNLTLPPK Unmodified 955.53385 0.53384611 1243 P29144 TPP2 Tripeptidyl-peptidase 2 yes yes 0 0 0 By MS/MS 2 0 1 1 45.326 40.005 2 0.0074131 52852 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.25 26.063 33932000 0 33932000 0 0 0 0 0 0 0 0 0 0 0 0 0 49258 1243 44193 413104 325890;325891;325892;325893;325894 325894 5 SSNPMMVLQLPER Unmodified 1500.7429 0.74286938 1981 P78406 RAE1 mRNA export factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 83.223 83.322 2 0.00044853 96379 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 79.741 69.217 59865000 0 0 0 0 1938600 3693200 2412500 5315400 0 8041500 5535300 8529200 0 8878800 15521000 49259 1981 44194 413105;413106;413107;413108;413109;413110;413111;413112;413113;413114;413115;413116 325895;325896;325897;325898;325899;325900;325901;325902;325903;325904;325905;325906 325901 12 SSNPMMVLQLPER 2 Oxidation (M) 1532.7327 0.73269863 1981 P78406 RAE1 mRNA export factor yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 65.017 65.054 2 0.00031518 74365 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 67.153 43.548 81922000 0 0 0 6633300 6883200 0 9896400 6851800 5530200 9242200 12398000 14663000 9823300 0 0 49260 1981 44194 413117;413118;413119;413120;413121;413122;413123;413124;413125;413126 325907;325908;325909;325910;325911;325912;325913;325914;325915;325916;325917;325918 325913 3203;3204 12 SSNPMMVLQLPER Oxidation (M) 1516.7378 0.737784 1981 P78406 RAE1 mRNA export factor yes yes 0 1 0 By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 74.673 74.836 2 0.00033238 86662 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 78.908 63.017 67065000 0 0 0 0 0 6160500 3791500 6451100 0 9812100 7349500 9334500 6848300 7854700 9463300 49261 1981 44194 413127;413128;413129;413130;413131;413132;413133;413134;413135 325919;325920;325921;325922;325923 325922 3203;3204 1 SSNSFPYNEQSGGGEATELGQEATSTISPSGAFGLFSSDLK Acetyl (Protein N-term) 4195.8982 0.89818645 128 O00203 AP3B1 AP-3 complex subunit beta-1 yes yes 1 0 0 By MS/MS 2 0 1 1 98.812 94.078 3 2.7118E-52 116375 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.198 83.035 38330000 0 38330000 0 0 0 0 0 0 0 0 0 0 0 0 0 49262 128 44195 413136 325924 325924 1 SSNSLVFQTLPR Unmodified 1347.7147 0.71466402 4026 Q99575 POP1 Ribonucleases P/MRP protein subunit POP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 74.247 74.34 2 0.00051408 85686 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 91.937 83.717 63879000 0 0 0 0 5437000 3456900 5096100 7705100 4375500 7944200 8443500 8244100 5193600 7982600 0 49263 4026 44196 413137;413138;413139;413140;413141;413142;413143;413144;413145;413146 325925;325926;325927;325928;325929;325930;325931 325928 5 SSNSSENQQFLK Unmodified 1367.6317 0.63172225 3590 Q8WXG6 MADD MAP kinase-activating death domain protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 29.385 29.388 2 0.00013608 30613 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 96.143 72.35 39749000 0 0 0 6278600 4566600 6142700 6677500 0 0 0 0 0 0 0 16083000 49264 3590 44197 413147;413148;413149;413150;413151;413152;413153;413154 325932;325933;325934;325935;325936;325937 325934 6 SSNVLLDERLTPK Unmodified 1470.8042 0.80420731 1664 P51617 IRAK1 Interleukin-1 receptor-associated kinase 1 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 66.642 61.321 3 0.010063 74722 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 51.211 45.932 43631000 0 43631000 0 0 0 0 0 0 0 0 0 0 0 0 0 49265 1664 44198 413155;413156 325938;325939 325939 2 SSPAAFINPPIGTVTPALK Unmodified 1880.0407 0.040749188 4243 Q9BY77 POLDIP3 Polymerase delta-interacting protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 86.83 86.912 2 9.5143E-05 101014 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 81.494 77.48 33311000 0 0 0 0 3104800 0 0 0 0 4098000 5173700 7485500 3240700 2750000 7458400 49266 4243 44199 413157;413158;413159;413160;413161;413162;413163 325940;325941;325942;325943;325944;325945 325944 6 SSPASTPSR Acetyl (Protein N-term) 930.44067 0.44067401 1332 P33991 MCM4 DNA replication licensing factor MCM4 yes yes 1 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 14.494 14.516 2 0.012564 14104 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 44.753 22.261 61974000 0 0 0 8289700 5288800 10541000 7976400 7269900 0 11710000 0 0 10898000 0 0 49267 1332 44200 413164;413165;413166;413167;413168;413169;413170 325946 325946 1 SSPASTPSRR Acetyl (Protein N-term) 1086.5418 0.54178503 1332 P33991 MCM4 DNA replication licensing factor MCM4 yes yes 1 0 1 By MS/MS 10 0 1 1 8.8717 9.2774 2 0.0017956 7413 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 97.635 71.179 7043600 0 0 0 0 0 0 0 0 0 0 7043600 0 0 0 0 49268 1332 44201 413171 325947 325947 1 SSPATSLFVELDEEEVK Unmodified 1878.9099 0.90985417 4228 Q9BXK5 BCL2L13 Bcl-2-like protein 13 yes yes 0 0 0 By MS/MS 3 0 1 1 90.918 87.704 2 0.036456 105034 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 45.257 36.303 1817300 0 1817300 0 0 0 0 0 0 0 0 0 0 0 0 0 49269 4228 44202 413172 325948 325948 1 SSPCHSQLLEAQTPEASQASPCPAVTPSAPSAALPDEGSR Unmodified 4087.8851 0.88513612 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 2 2 1 1 1 2 2 2 2 74.779 74.875 3;4 9.9985E-58 86529 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 68.453 64.418 113070000 0 0 0 0 12221000 0 9911200 5893100 6786500 10094000 19569000 20672000 12883000 15040000 0 49270 4285 44203 413173;413174;413175;413176;413177;413178;413179;413180;413181;413182;413183;413184;413185;413186;413187 325949;325950;325951;325952;325953;325954;325955;325956;325957;325958 325956 10 SSPDMLYQYLK Oxidation (M) 1359.6381 0.63805318 4425 Q9H6T3 RPAP3 RNA polymerase II-associated protein 3 yes yes 0 1 0 By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By matching By matching By matching 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 75.689 75.077 2 0.0086272 86416 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 46.891 28.111 54594000 0 27250000 2733000 0 0 3320500 2407900 1869100 2449500 3697200 3520400 0 3392100 0 3954400 49271 4425 44204 413188;413189;413190;413191;413192;413193;413194;413195;413196;413197 325959;325960;325961 325960 5876 3 SSPDMLYQYLK Unmodified 1343.6431 0.64313856 4425 Q9H6T3 RPAP3 RNA polymerase II-associated protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 84.775 81.166 2 0.0026536 93527 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.239 68.749 132500000 0 130730000 1769700 0 0 0 0 0 0 0 0 0 0 0 0 49272 4425 44204 413198;413199;413200 325962;325963;325964 325963 3 SSPELEDTATSSK Unmodified 1350.6151 0.61506914 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 23.629 24.125 2 0.033634 24215 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 46.796 35.203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49273 1492 44205 413201;413202 325965;325966 325966 2 SSPEPVALTESETEYVIR Unmodified 2005.9844 0.9844161 5267 Q9Y678 COPG1 Coatomer subunit gamma-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 2 2 22 4 1 2 1 2 2 2 2 2 2 2 2 2 80.784 80.241 2;3 7.2241E-88 98701 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 198.37 179.75 634480000 0 139100000 0 6282400 26700000 37745000 26703000 33460000 32567000 62486000 53926000 66978000 26762000 38329000 83440000 49274 5267 44206 413203;413204;413205;413206;413207;413208;413209;413210;413211;413212;413213;413214;413215;413216;413217;413218;413219;413220;413221;413222;413223;413224;413225;413226;413227;413228 325967;325968;325969;325970;325971;325972;325973;325974;325975;325976;325977;325978;325979;325980;325981;325982;325983;325984;325985;325986;325987;325988 325971 17 SSPEPVALTESETEYVIRCTK Unmodified 2395.1577 0.15770579 5267 Q9Y678 COPG1 Coatomer subunit gamma-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.5 0.5 2 2 2 1 1 83.627 79.25 3 6.1078E-24 100713 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.463 80.591 77090000 29784000 27773000 19533000 0 0 0 0 0 0 0 0 0 0 0 0 49275 5267 44207 413229;413230;413231;413232 325989;325990;325991 325990 3 SSPEQPIGQGR Unmodified 1154.568 0.56799978 3315 Q8N201 INTS1 Integrator complex subunit 1 yes yes 0 0 0 By MS/MS 10 0 1 1 18.267 18.568 2 0.01951 17591 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 43.083 30.046 3320300 0 0 0 0 0 0 0 0 0 0 0 0 0 3320300 0 49276 3315 44208 413233 325992 325992 1 SSPEQPRPSTSK Unmodified 1299.6419 0.64189301 1253 P29590 PML Protein PML yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 7.1825 7.3197 3 0.0027356 5407 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 58.674 47.769 73846000 0 0 0 3291600 3400700 0 3184500 3507200 6543500 7251000 12334000 7043400 9488100 7539400 10262000 49277 1253 44209 413234;413235;413236;413237;413238;413239;413240;413241;413242;413243;413244 325993;325994;325995;325996;325997;325998 325995 6 SSPETPPQESTCVDDIHPR Unmodified 2150.9539 0.95386103 5102 Q9Y2H2 INPP5F Phosphatidylinositide phosphatase SAC2 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 45.252 45.799 3 3.0609E-06 50498 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.742 63.033 47282000 0 0 0 0 0 0 0 0 11628000 0 0 19740000 0 0 15914000 49278 5102 44210 413245;413246;413247 325999 325999 1 SSPEVSSINQEALVLTAK Unmodified 1871.984 0.98402217 4600 Q9NRG0 CHRAC1 Chromatin accessibility complex protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.76 3.75 5 4 12 4 4 1 1 1 1 1 1 1 1 1 1 1 1 1 79.888 78.296 2;3 1.7632E-53 96669 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 182.33 167.64 1064600000 18108000 732010000 3727700 10242000 17949000 27290000 15918000 22064000 19313000 45376000 37856000 38150000 18130000 17658000 40824000 49279 4600 44211 413248;413249;413250;413251;413252;413253;413254;413255;413256;413257;413258;413259;413260;413261;413262;413263;413264;413265;413266;413267;413268 326000;326001;326002;326003;326004;326005;326006;326007;326008;326009;326010;326011;326012;326013;326014;326015 326003 15 SSPGAGPSDHHSASRDER Unmodified 1848.8099 0.8099144 5109 Q9Y2K7 KDM2A Lysine-specific demethylase 2A yes yes 0 0 1 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 5.6167 5.7714 4 1.2006E-05 3664 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 75.463 59.578 56249000 0 0 0 0 2581300 0 6379100 0 4255000 3689900 6314900 8831300 8493200 5163400 10541000 49280 5109 44212 413269;413270;413271;413272;413273;413274;413275;413276;413277 326016;326017;326018;326019;326020 326017 5 SSPGIHLERSQASTTVDINTQVEK Unmodified 2596.3093 0.30927249 2427 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 67.425 59.13 4 0.00036301 79226 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.827 43.839 16437000 16437000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49281 2427 44213 413278 326021 326021 1 SSPGQPEAGPEGAQERPSQAAPAVEAEGPGSSQAPR Unmodified 3483.6251 0.62508033 1409 P40222 TXLNA Alpha-taxilin yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 14 1 2 1 2 2 1 3 1 1 49.084 49.133 3;4 3.2201E-61 54896 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.163 68.647 171820000 0 0 0 9166700 15141000 9967400 18095000 15639000 0 14839000 50955000 0 0 0 38013000 49282 1409 44214 413279;413280;413281;413282;413283;413284;413285;413286;413287;413288;413289;413290;413291;413292 326022;326023;326024;326025;326026;326027;326028;326029;326030;326031;326032 326025 11 SSPGQTPEEGAQALAEFAALHGPALR Unmodified 2604.2932 0.29322849 2384 Q14166 TTLL12 Tubulin--tyrosine ligase-like protein 12 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 89.951 90.077 3 0.00039263 104350 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 30.223 23.03 9845900 0 0 0 0 0 0 0 0 0 2259100 0 0 0 0 7586800 49283 2384 44215 413293;413294 326033;326034;326035 326035 3 SSPGSVAASPSGGGGR Unmodified 1329.6273 0.62730558 4223 Q9BXB5 OSBPL10 Oxysterol-binding protein-related protein 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 15.61 15.774 2 0.00049717 15275 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 75.088 64.564 101910000 0 0 0 6539600 4617300 4497800 6540000 6036900 5625500 8515600 17408000 12861000 0 13725000 15544000 49284 4223 44216 413295;413296;413297;413298;413299;413300;413301;413302;413303;413304;413305 326036;326037;326038;326039;326040;326041;326042;326043;326044;326045 326044 10 SSPGTQDLLGIQTGMMAPENK Unmodified 2174.0348 0.034753886 2759 Q5SW79 CEP170 Centrosomal protein of 170 kDa yes yes 0 0 0 By MS/MS 2 0 1 1 85.696 80.922 2 8.4183E-100 100602 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 172.57 151.02 46633000 0 46633000 0 0 0 0 0 0 0 0 0 0 0 0 0 49285 2759 44217 413306 326046 326046 1 SSPIAQPASSFQVETASQGHSISHHK Unmodified 2717.3158 0.31575485 3295 Q8IZH2 XRN1 5'-3' exoribonuclease 1 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 56.175 52.395 4 1.0267E-30 72108 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 100.62 97.422 65490000 38240000 0 0 0 0 0 0 0 0 0 0 0 0 0 27250000 49286 3295 44218 413307;413308 326047;326048 326048 2 SSPICSTTGDDK Unmodified 1266.5398 0.5397957 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 16.751 17.065 2 0.022148 15926 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.625 30.762 14821000 0 0 0 0 0 1559500 0 0 1589400 0 1835800 3170800 2319000 1721600 2624400 49287 2193 44219 413309;413310;413311;413312;413313;413314;413315 326049;326050;326051;326052;326053 326050 5 SSPLLGGNGK Unmodified 928.49779 0.49779495 106 Q9C075;CON__Q9C075;CON__Q99PS0 KRT23 Keratin, type I cytoskeletal 23 yes no 0 0 0 By MS/MS 10 0 1 1 26.029 25.829 2 0.0062005 27633 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 65.88 38.393 + 18997000 0 0 0 18997000 0 0 0 0 0 0 0 0 0 0 0 49288 106 44220 413316 326054 326054 1 SSPLMFVNVSGSHEAK Oxidation (M) 1704.8141 0.81412007 2310 Q13535 ATR Serine/threonine-protein kinase ATR yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 71.89 65.985 3 0.0020101 87425 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.798 40.358 50755000 45602000 0 5153000 0 0 0 0 0 0 0 0 0 0 0 0 49289 2310 44221 413317;413318 326055 326055 3772 1 SSPLMFVNVSGSHEAK Unmodified 1688.8192 0.81920545 2310 Q13535 ATR Serine/threonine-protein kinase ATR yes yes 0 0 0 By MS/MS 2 0 1 1 79.057 70.927 3 0.0049828 93274 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 36.226 24.08 25713000 25713000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49290 2310 44221 413319 326056 326056 1 SSPMVQVDEK Unmodified 1118.5278 0.52777445 3029 Q71RC2 LARP4 La-related protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.2 32.386 2 0.0041248 35741 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 73.985 51.854 80267000 0 0 0 4012800 3628500 5803700 5393300 5951100 4518100 6252800 9579700 8896900 9036900 6308200 10885000 49291 3029 44222 413320;413321;413322;413323;413324;413325;413326;413327;413328;413329;413330;413331 326057;326058;326059;326060;326061;326062;326063;326064;326065;326066 326066 10 SSPMVQVDEK Oxidation (M) 1134.5227 0.52268908 3029 Q71RC2 LARP4 La-related protein 4 yes yes 0 1 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 21.778 21.985 2 0.012487 22794 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.091 23.197 26895000 0 0 0 1652100 1812800 0 3508600 0 2959700 3611800 4804400 4256500 0 0 4289400 49292 3029 44222 413332;413333;413334;413335;413336;413337;413338;413339 326067 326067 4644 1 SSPNPFVGSPPK Unmodified 1212.6139 0.61388734 2021 P98082 DAB2 Disabled homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.584 48.744 2 0.00027515 54815 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 83 71.152 652460000 0 0 0 29631000 26962000 45511000 45418000 33965000 48046000 60444000 73406000 54483000 51831000 59818000 122940000 49293 2021 44223 413340;413341;413342;413343;413344;413345;413346;413347;413348;413349;413350;413351 326068;326069;326070;326071;326072;326073;326074;326075;326076;326077;326078;326079;326080 326077 12 SSPPSIAPLALDSADLSEEK Unmodified 2026.0106 0.010630851 1433 P41214 EIF2D Eukaryotic translation initiation factor 2D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 7.27 3.62 2 2 7 1 3 1 1 1 1 1 1 1 84.628 82.871 2;3 9.7267E-38 102749 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 155.37 132.46 192590000 5673000 166850000 0 1140500 1659800 3002600 2655800 3454300 0 0 0 0 0 2673900 5477800 49294 1433 44224 413352;413353;413354;413355;413356;413357;413358;413359;413360;413361;413362 326081;326082;326083;326084;326085;326086 326081 6 SSPPVQFSLLHSK Unmodified 1425.7616 0.76161421 689 O95782 AP2A1 AP-2 complex subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.985 69.064 3 0.017431 79197 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 35.657 30.284 101670000 0 0 0 4547200 5500300 8039900 8129900 9720400 4914300 8804400 9685100 10799000 6018200 8847900 16662000 49295 689 44225 413363;413364;413365;413366;413367;413368;413369;413370;413371;413372;413373;413374 326087;326088;326089;326090 326090 4 SSPQAAVPYKK Unmodified 1174.6346 0.63462279 4371 Q9H2P0 ADNP Activity-dependent neuroprotector homeobox protein yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 27.057 22.233 3 0.011181 31256 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 39.785 24.641 27391000 20289000 7101800 0 0 0 0 0 0 0 0 0 0 0 0 0 49296 4371 44226 413375;413376 326091 326091 1 SSPQLDPLRK Unmodified 1139.6299 0.62987176 3415 Q8ND56 LSM14A Protein LSM14 homolog A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 2 2 2 2 1 2 1 2 2 1 36.876 37.005 2;3 0.0030708 39575 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 48.44 31.498 527650000 0 0 0 38318000 32842000 43710000 41344000 34772000 46885000 38759000 49243000 41786000 76544000 41838000 41607000 49297 3415 44227 413377;413378;413379;413380;413381;413382;413383;413384;413385;413386;413387;413388;413389;413390;413391;413392;413393;413394;413395;413396;413397 326092;326093;326094;326095;326096;326097;326098;326099;326100;326101;326102;326103;326104;326105 326100 13 SSPQPLVATPSQHHQQQQQQIK Unmodified 2494.2677 0.26768244 4797 Q9P0U4 CXXC1 CXXC-type zinc finger protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 2 24 1 1 2 2 2 2 2 2 2 2 2 2 2 2 32.991 32.774 3;4 4.2345E-15 42378 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 93.5 86.399 540680000 140620000 0 30707000 18134000 23652000 27428000 26967000 25335000 22408000 25869000 46574000 44601000 44636000 26356000 37396000 49298 4797 44228 413398;413399;413400;413401;413402;413403;413404;413405;413406;413407;413408;413409;413410;413411;413412;413413;413414;413415;413416;413417;413418;413419;413420;413421;413422;413423 326106;326107;326108;326109;326110;326111;326112;326113;326114;326115;326116;326117;326118;326119;326120;326121;326122;326123;326124;326125 326117 19 SSPSARPPDVPGQQPQAAK Unmodified 1916.9704 0.97043779 3898 Q96JP5 ZFP91 E3 ubiquitin-protein ligase ZFP91 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.881 34.064 3 4.8875E-12 36446 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 88.565 78.508 459120000 0 0 0 23442000 38415000 34196000 31242000 20959000 22551000 45628000 49365000 53674000 60805000 36641000 42200000 49299 3898 44229 413424;413425;413426;413427;413428;413429;413430;413431;413432;413433;413434;413435 326126;326127;326128;326129;326130;326131;326132;326133;326134;326135;326136;326137 326134 7 SSPSGPSNPSNPSVEEK Unmodified 1698.7697 0.7696723 3597 Q8WY22 BRI3BP BRI3-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 24.126 24.35 2 1.3369E-09 24797 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 102.73 77.11 80018000 0 0 0 7421600 5677000 0 6043700 8250100 4301900 9999500 7320700 8263100 8789500 4588300 9363000 49300 3597 44230 413436;413437;413438;413439;413440;413441;413442;413443;413444;413445;413446 326138;326139;326140;326141;326142;326143;326144;326145;326146 326141 9 SSPSIICMPK Unmodified 1118.5464 0.54640141 4779 Q9NZN8 CNOT2 CCR4-NOT transcription complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 59.405 59.675 2 0.034153 67642 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 41.876 24.645 53405000 0 0 0 0 0 3772200 2719900 0 3030000 8076600 9431600 10761000 4111800 0 11502000 49301 4779 44231 413447;413448;413449;413450;413451;413452;413453;413454 326147;326148;326149 326149 3 SSPSILAVQR Unmodified 1056.5928 0.59275797 199 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 49.651 49.806 2 0.0070449 55584 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 63.419 35.714 117840000 0 0 0 11496000 7245100 10014000 8418700 0 7418000 10471000 13416000 14549000 10971000 12731000 11111000 49302 199 44232 413455;413456;413457;413458;413459;413460;413461;413462;413463;413464;413465 326150;326151;326152;326153;326154;326155;326156 326155 7 SSPSMSHMEALGK Unmodified 1360.6115 0.61152086 4801 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 39.023 38.127 3 0.0056922 52338 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 39.746 29.694 65105000 22979000 0 5109100 0 0 0 4078100 5765900 2681300 0 0 7274200 6051500 4357200 6807800 49303 4801 44233 413466;413467;413468;413469;413470;413471;413472;413473;413474 326157;326158;326159;326160 326158 4 SSPSTGSLDSGNESK Unmodified 1451.6376 0.63759549 2491 Q15057 ACAP2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.79 2.98 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 22.66 22.859 2 2.5299E-05 14874 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.593 70.213 77919000 20177000 0 0 2109600 2185000 3243000 2412600 2251800 3161600 2782300 4419700 10796000 6496900 9016800 8866400 49304 2491 44234 413475;413476;413477;413478;413479;413480;413481;413482;413483;413484;413485;413486;413487;413488 326161;326162;326163;326164;326165;326166;326167;326168;326169;326170;326171;326172;326173 326165 12 SSPSVKPAVDPAAAK Unmodified 1423.7671 0.76709352 2875 Q6FI81 CIAPIN1 Anamorsin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.53 3 2 11 4 1 1 1 1 1 1 1 1 1 1 1 1 33.169 31.906 2;3 0.0013847 39685 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 62.377 54.833 453410000 0 280900000 2610600 9094900 11066000 8259300 18721000 11540000 0 17949000 20114000 24224000 12080000 10472000 26386000 49305 2875 44235 413489;413490;413491;413492;413493;413494;413495;413496;413497;413498;413499;413500;413501;413502;413503;413504 326174;326175;326176;326177;326178;326179;326180;326181;326182;326183;326184;326185;326186;326187;326188 326181 14 SSPVDLVTATDQK Unmodified 1359.6882 0.6881745 1244 P29218 IMPA1 Inositol monophosphatase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 59.474 58.391 2;3 1.2655E-32 65972 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 205.18 174.92 153650000 16880000 27766000 0 4623200 1811900 0 3030300 3664200 0 3510800 14109000 17465000 5837900 15258000 39694000 49306 1244 44236 413505;413506;413507;413508;413509;413510;413511;413512;413513;413514;413515;413516 326189;326190;326191;326192;326193;326194;326195;326196;326197 326191 8 SSPVEALK Unmodified 829.45453 0.45453316 2875 Q6FI81 CIAPIN1 Anamorsin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 30.6 30.903 2 0.045385 33799 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 48.561 15.778 185090000 0 0 0 0 0 18843000 12439000 18829000 11838000 20015000 15192000 25333000 16831000 16519000 29253000 49307 2875 44237 413517;413518;413519;413520;413521;413522;413523;413524;413525;413526 326198 326198 1 SSPVEFECINEK Unmodified 1437.6446 0.64459513 458 O75131 CPNE3 Copine-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.43 2.06 1 13 1 1 1 1 1 1 1 1 1 2 1 1 1 57.728 57.712 2 2.4609E-06 65283 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 125.66 117.43 152660000 0 0 0 21476000 10463000 17191000 10954000 13566000 12220000 20710000 0 0 26740000 19337000 0 49308 458 44238 413527;413528;413529;413530;413531;413532;413533;413534;413535;413536;413537;413538;413539;413540 326199;326200;326201;326202;326203;326204;326205;326206;326207;326208;326209 326208 10 SSPVGGGPR Unmodified 812.41407 0.41406533 2039 Q00587 CDC42EP1 Cdc42 effector protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 9.573 9.6942 2 0.0052749 6951 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 78.178 53.992 97396000 0 0 0 5873800 6959900 6717900 10704000 8538300 7776600 8068500 15268000 0 9600000 6780900 11107000 49309 2039 44239 413541;413542;413543;413544;413545;413546;413547;413548;413549;413550;413551 326210;326211;326212 326210 3 SSPVGGGPRGPAGPALGR Unmodified 1588.8434 0.84338678 2039 Q00587 CDC42EP1 Cdc42 effector protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 39.721 39.779 3 0.0030831 44133 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 26.474 17.192 49745000 0 0 0 4515300 3288600 0 8858600 6952700 5875800 0 9464300 0 6618700 4171100 0 49310 2039 44240 413552;413553;413554;413555;413556;413557;413558;413559 326213;326214;326215;326216 326213 4 SSPVGPAPGSSPSELPASPAGGSAPVGK Unmodified 2444.2183 0.21833222 2857 Q68DC2 ANKS6 Ankyrin repeat and SAM domain-containing protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 64.879 64.967 3 1.4865E-14 74332 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 45.611 33.655 45149000 0 0 0 0 6717100 0 0 10019000 0 8286200 0 10900000 0 9227400 0 49311 2857 44241 413560;413561;413562;413563;413564 326217;326218;326219;326220;326221 326218 5 SSPVNNHHSPGQTPTLGQPEAR Unmodified 2310.1101 0.11011917 2759 Q5SW79;Q96L14 CEP170;CEP170P1 Centrosomal protein of 170 kDa;Cep170-like protein yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 3 21 2 1 1 1 2 1 2 2 2 2 2 2 2 2 33.121 32.646 3;4 7.8387E-07 46001 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.922 65.055 181090000 46778000 0 1565300 4671700 6161000 12439000 8150400 8778000 6992800 10905000 13576000 19314000 14059000 14897000 12801000 49312 2759 44242 413565;413566;413567;413568;413569;413570;413571;413572;413573;413574;413575;413576;413577;413578;413579;413580;413581;413582;413583;413584;413585;413586;413587;413588 326222;326223;326224;326225;326226;326227 326225 6 SSPVNRPSSATNK Unmodified 1343.6793 0.67934115 3915 Q96L91 EP400 E1A-binding protein p400 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 7.9344 8.0453 3 0.00069127 6587 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 49.483 36.951 192320000 0 0 0 10977000 8716900 10122000 11699000 9645200 0 18871000 48890000 27991000 25405000 0 20000000 49313 3915 44243 413589;413590;413591;413592;413593;413594;413595;413596;413597;413598 326228;326229;326230;326231;326232;326233;326234;326235;326236 326234 8 SSPVPEMLEESQELLEPVVDDVPK Unmodified 2665.3044 0.30442961 2830 Q5VZ89 DENND4C DENN domain-containing protein 4C yes yes 0 0 0 By MS/MS 3 0 1 1 99.199 95.848 3 0.036702 114985 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 19.324 16.336 2745000 0 2745000 0 0 0 0 0 0 0 0 0 0 0 0 0 49314 2830 44244 413599 326237 326237 1 SSPVRMSESPTPCSGSSFEETEALVNTAAK Oxidation (M) 3171.4336 0.43362266 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 1 1 By MS/MS 2 0 1 1 77.031 74.341 3 7.3978E-10 90416 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 47.757 41.791 12893000 0 0 12893000 0 0 0 0 0 0 0 0 0 0 0 0 49315 645 44245 413600 326238 326238 786 1 SSPVRMSESPTPCSGSSFEETEALVNTAAK Unmodified 3155.4387 0.43870804 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 0 1 By MS/MS 2 0 1 1 79.85 77.276 3 2.6655E-12 93795 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 61.89 56.515 8561600 0 0 8561600 0 0 0 0 0 0 0 0 0 0 0 0 49316 645 44245 413601 326239 326239 1 SSQAEACSESRNRVK Unmodified 1707.7958 0.79584424 4769 Q9NZJ0 DTL Denticleless protein homolog yes yes 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 7.8106 4.8777 3 0.0051912 8419 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.746 63.201 54984000 51973000 0 3011100 0 0 0 0 0 0 0 0 0 0 0 0 49317 4769 44246 413602;413603 326240 326240 0 SSQDEMVSTK Unmodified 1110.4863 0.48630357 301 O43164 PJA2 E3 ubiquitin-protein ligase Praja-2 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 14.2 14.353 2 0.0041248 12899 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 73.985 49.166 9795400 0 0 0 0 1179800 827080 0 0 872400 0 2690900 0 2314200 1911000 0 49318 301 44247 413604;413605;413606;413607;413608;413609;413610 326241;326242;326243;326244 326242 4 SSQEEEPVDPQLMR Unmodified 1643.7461 0.74610008 1413 P40425 PBX2 Pre-B-cell leukemia transcription factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 55.412 55.543 2 0.0040662 62196 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.592 40.359 25191000 0 0 0 2491400 0 2532000 0 0 0 4867300 5135400 0 0 3531200 6633600 49319 1413 44248 413611;413612;413613;413614;413615;413616 326245;326246;326247 326245 3 SSQEEVRSYSDPPLK Unmodified 1720.8268 0.82679325 1692 P52597 HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.33 3.93 6 1 8 2 3 2 1 1 1 1 1 1 1 1 41.431 38.99 2;3 0.00061267 47994 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 62.162 62.162 1548300000 88597000 1333200000 47817000 4628200 6723200 5446600 12404000 10120000 13224000 12629000 0 0 13576000 0 0 49320 1692 44249 413617;413618;413619;413620;413621;413622;413623;413624;413625;413626;413627;413628;413629;413630;413631 326248;326249;326250;326251;326252;326253;326254 326250 6 SSQEQGELQGR Unmodified 1217.5636 0.56364269 461 O75146 HIP1R Huntingtin-interacting protein 1-related protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 12.142 12.261 2 0.0032777 11475 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 64.297 45.517 22595000 0 0 0 2711300 1639600 4219300 2047100 1578800 1802300 2261800 2781200 1944800 0 1608600 0 49321 461 44250 413632;413633;413634;413635;413636;413637;413638;413639;413640;413641 326255;326256;326257;326258;326259 326255 5 SSQETPAHSSGQPPRDAK Unmodified 1878.882 0.88201671 4763 Q9NZC9 SMARCAL1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 7.0801 6.9854 3 0.00079459 4595 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.848 43.188 26914000 0 0 3367200 0 0 0 1694600 0 2112600 3588400 5183700 0 2174700 4757200 4035300 49322 4763 44251 413642;413643;413644;413645;413646;413647;413648;413649 326260;326261;326262;326263 326261 4 SSQGASNFDK Unmodified 1039.4571 0.45705235 3107 Q7Z5K2 WAPAL Wings apart-like protein homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 9.7906 9.3312 2 0.0083185 11032 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.409 27.98 56230000 5569400 30894000 0 1981400 1191700 2258200 2180700 2262800 1422400 1334800 0 2074000 1969400 979580 2111300 49323 3107 44252 413650;413651;413652;413653;413654;413655;413656;413657;413658;413659;413660;413661;413662 326264;326265 326264 1 SSQGDSGVDLSAESR Unmodified 1493.6594 0.65939357 2736 Q5JSZ5 PRRC2B Protein PRRC2B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 30.781 30.979 2 4.3763E-10 34086 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 96.103 77.323 44252000 0 0 0 0 3261700 4276200 3314800 0 4533700 0 7078100 0 6835900 6782600 8169100 49324 2736 44253 413663;413664;413665;413666;413667;413668;413669;413670;413671;413672 326266;326267;326268;326269;326270;326271;326272;326273;326274;326275 326275 10 SSQGSEFLEEPDKLEEK Unmodified 1950.9058 0.90583143 2835 Q5W0B1 RNF219 RING finger protein 219 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.64 2.9 1 1 9 2 1 1 1 1 1 1 1 1 1 60.786 59.862 3 0.0018333 68117 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 45.452 28.958 83176000 0 23544000 0 3169400 4034700 6388200 0 0 5511600 6890600 9825800 0 6116000 7510800 10185000 49325 2835 44254 413673;413674;413675;413676;413677;413678;413679;413680;413681;413682;413683 326276;326277;326278;326279;326280;326281;326282;326283;326284;326285 326281 10 SSQGSSSSTQSAPSETASASK Unmodified 1970.8665 0.86648581 5005 Q9ULU4 ZMYND8 Protein kinase C-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.763 11.883 2 1.412E-53 10442 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 122.34 117.02 56121000 0 0 0 3393900 3671700 4606300 4272900 3863500 3279100 4584600 0 8473300 8067500 5208800 6699500 49326 5005 44255 413684;413685;413686;413687;413688;413689;413690;413691;413692;413693;413694 326286;326287;326288;326289;326290;326291;326292;326293;326294;326295;326296;326297;326298 326295 13 SSQGSSSVSSDAPGNVLCALSQK Unmodified 2265.0543 0.054303355 4997 Q9ULJ3 ZBTB21 Zinc finger and BTB domain-containing protein 21 yes yes 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 78.018 78.11 2 0.0032156 90612 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 51.695 45.397 30306000 0 0 0 0 4862600 0 0 3289800 1835300 3638900 3726300 6750100 2715400 3487100 0 49327 4997 44256 413695;413696;413697;413698;413699;413700;413701;413702 326299 326299 0 SSQIGSSQLLK Unmodified 1146.6245 0.62445203 4823 Q9P2N6 KANSL3 KAT8 regulatory NSL complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 44.12 43.72 2 0.00045527 56578 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.52 55.287 128880000 0 40777000 0 9238400 6973000 0 7393600 6821800 0 10603000 11254000 16107000 9756800 0 9959300 49328 4823 44257 413703;413704;413705;413706;413707;413708;413709;413710;413711;413712 326300;326301;326302 326300 2 SSQIGTGDLK Unmodified 1004.5138 0.51383895 5193 Q9Y4C1 KDM3A Lysine-specific demethylase 3A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.989 27.189 2 0.0015191 29354 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 92.838 49.714 158240000 0 0 0 12030000 12611000 15414000 14625000 0 10144000 14197000 17910000 16526000 13755000 15286000 15739000 49329 5193 44258 413713;413714;413715;413716;413717;413718;413719;413720;413721;413722;413723;413724 326303;326304;326305;326306;326307;326308;326309;326310;326311;326312;326313;326314;326315 326303 13 SSQIVDPWER Unmodified 1215.5884 0.58840088 4679 Q9NVR2 INTS10 Integrator complex subunit 10 yes yes 0 0 0 By MS/MS 10 0 1 1 60.389 60.581 2 0.042113 69383 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 54.416 39.747 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49330 4679 44259 413725 326316 326316 1 SSQLGDTTTGHLSSGEQK Unmodified 1831.8548 0.85479891 3018 Q6ZV73 FGD6 FYVE, RhoGEF and PH domain-containing protein 6 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 27.445 26.582 3 5.7305E-06 33980 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.928 62.489 41626000 0 18759000 0 2385900 2994300 3563500 0 0 1935300 0 4336400 0 0 3879200 3771800 49331 3018 44260 413726;413727;413728;413729;413730;413731;413732;413733;413734 326317;326318 326317 2 SSQLGIISNK Unmodified 1045.5768 0.57677356 3617 Q92540 SMG7 Protein SMG7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 42.446 42.508 2 0.011537 47184 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 54.066 19.977 37349000 0 0 0 2675400 2411500 3418000 3787300 3096100 3135200 4351900 5245000 0 4914300 4314400 0 49332 3617 44261 413735;413736;413737;413738;413739;413740;413741;413742;413743;413744 326319;326320;326321 326320 3 SSQLVAHPPGTVITSVIK Unmodified 1833.036 0.035998161 1322 P32519 ELF1 ETS-related transcription factor Elf-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 75.633 75.808 3 0.0076001 87508 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 31.111 21.054 43635000 0 0 0 0 0 0 8226300 0 8108200 7705800 0 0 0 7873900 11721000 49333 1322 44262 413745;413746;413747;413748;413749 326322;326323;326324 326322 3 SSQPLASK Unmodified 816.43413 0.43413207 1048 P17096 HMGA1 High mobility group protein HMG-I/HMG-Y yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 7.2673 6.0692 2 0.034949 9326 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.789 33.971 127740000 127630000 105900 0 0 0 0 0 0 0 0 0 0 0 0 0 49334 1048 44263 413750;413751;413752 326325 326325 1 SSQPQAGSQGPQTFR Unmodified 1574.7437 0.74373232 2274 Q13356 PPIL2 Peptidyl-prolyl cis-trans isomerase-like 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 29.262 29.387 2 0.017282 31841 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 41.54 31.309 62299000 0 0 0 4876200 3525000 5382500 6759600 8247500 0 5843600 9067800 0 0 6589600 12007000 49335 2274 44264 413753;413754;413755;413756;413757;413758;413759;413760;413761 326326 326326 1 SSQPSPTAVPASDSPPTK Unmodified 1752.853 0.853008 2667 Q3KQU3 MAP7D1 MAP7 domain-containing protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 7 1 1 1 1 1 1 1 38.08 38.22 2 0.0032376 42033 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 41.092 34.708 20192000 0 0 0 1995000 2495400 3193800 0 0 1681300 0 0 4447600 0 2060700 4318500 49336 2667 44265 413762;413763;413764;413765;413766;413767;413768 326327;326328;326329 326329 1 SSQQPSTPQQAPPGQPQQGTFVAHK Unmodified 2630.2837 0.28372644 3167 Q86VM9 ZC3H18 Zinc finger CCCH domain-containing protein 18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 42.959 42.373 3 2.7608E-24 46916 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 84.602 78.238 395060000 0 53108000 0 15508000 17436000 19834000 23083000 21228000 21010000 28474000 36366000 44624000 33564000 31623000 49205000 49337 3167 44266 413769;413770;413771;413772;413773;413774;413775;413776;413777;413778;413779;413780;413781;413782 326330;326331;326332;326333;326334;326335;326336;326337;326338;326339;326340;326341;326342;326343;326344 326342 15 SSQSHPDGLSGR Acetyl (Protein N-term) 1268.5745 0.57454173 1784 P56524 HDAC4 Histone deacetylase 4 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 18.12 18.425 2 0.001471 18696 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 57.174 35.324 3694000 0 0 0 0 0 0 0 0 0 0 0 0 3694000 0 0 49338 1784 44267 413783;413784;413785;413786 326345;326346;326347;326348 326348 4 SSQSSSQQFSGIGR Unmodified 1454.675 0.67498405 3670 Q92841 DDX17 Probable ATP-dependent RNA helicase DDX17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.614 33.797 2 0 36677 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 273.75 246.79 767630000 0 0 0 33056000 40913000 53900000 44308000 46687000 39656000 72929000 83344000 95634000 97545000 65941000 93719000 49339 3670 44268 413787;413788;413789;413790;413791;413792;413793;413794;413795;413796;413797;413798 326349;326350;326351;326352;326353;326354;326355;326356;326357;326358;326359;326360;326361;326362;326363 326361 15 SSQSSTLSHSNR Unmodified 1289.596 0.59600545 2346 Q13835 PKP1 Plakophilin-1 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 5.6979 5.7679 3 1.5025E-05 3565 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 76.522 68.612 38816000 0 0 0 0 0 2576300 0 36240000 0 0 0 0 0 0 0 49340 2346 44269 413799;413800 326364 326364 1 SSQTGTEPGAAHTSSPQPSTSR Unmodified 2169.9887 0.98866663 4286 Q9C0C7 AMBRA1 Activating molecule in BECN1-regulated autophagy protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 16.714 16.961 3 4.0062E-07 15799 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 56.149 51.247 24563000 0 0 0 2074900 0 2708800 0 2475500 1642200 0 2322900 3344900 3256000 2063500 4674400 49341 4286 44270 413801;413802;413803;413804;413805;413806;413807;413808;413809 326365;326366;326367;326368;326369;326370;326371;326372 326367 8 SSQTSGTNEQSSAIVSAR Unmodified 1808.85 0.85004788 430 O60763 USO1 General vesicular transport factor p115 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 2 1 1 1 1 1 1 1 2 2 29.121 29.342 2;3 8.7652E-20 30754 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 101.61 82.476 330130000 0 0 0 15663000 12406000 30975000 18298000 14863000 10830000 32219000 31347000 34688000 23746000 39582000 65509000 49342 430 44271 413810;413811;413812;413813;413814;413815;413816;413817;413818;413819;413820;413821;413822;413823;413824 326373;326374;326375;326376;326377;326378;326379;326380;326381;326382 326377 9 SSQTSGTNEQSSAIVSARDSEQVAELK Unmodified 2808.3373 0.33733773 430 O60763 USO1 General vesicular transport factor p115 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 62.912 56.932 3 1.5927E-163 73402 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 179.79 172.6 156640000 12282000 134340000 10016000 0 0 0 0 0 0 0 0 0 0 0 0 49343 430 44272 413825;413826;413827 326383;326384;326385 326383 3 SSQVVGIEPLYIK Acetyl (Protein N-term) 1473.8079 0.80789571 950 P11474 ESRRA Steroid hormone receptor ERR1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 88.21 88.25 2 0.0050429 102140 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 51.268 40.239 18478000 0 0 0 1199900 1999600 0 1942800 1951000 2471600 0 0 3189400 0 0 5723700 49344 950 44273 413828;413829;413830;413831;413832;413833;413834 326386;326387;326388 326386 3 SSREFGSVDYWEK Unmodified 1588.7158 0.71578623 3361 Q8N6R0 METTL13 Methyltransferase-like protein 13 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 66.111 60.085 3 0.0025747 80617 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.246 48.618 25426000 19146000 0 6280000 0 0 0 0 0 0 0 0 0 0 0 0 49345 3361 44274 413835;413836 326389;326390;326391 326390 3 SSRGGSPDLWK Unmodified 1188.5887 0.58873523 3897 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 40.557 33.884 3 0.018072 47117 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.267 41.491 64631000 64631000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49346 3897 44275 413837 326392 326392 0 SSRQPAQDTAPTPAPR Unmodified 1678.8387 0.83869534 3321 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.859 20.063 3 0.032144 20807 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 27.589 16.218 70935000 0 0 0 3915500 3645500 5735700 6205100 5646800 4095700 8656000 8341700 6694500 5625500 4667600 7705700 49347 3321 44276 413838;413839;413840;413841;413842;413843;413844;413845;413846;413847;413848;413849 326393;326394 326393 1 SSSADFGTFNTSQSHQTASAVSK Unmodified 2344.0567 0.056746196 1691 P52594 AGFG1 Arf-GAP domain and FG repeat-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 48.229 47.387 3 3.9165E-191 53233 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 206.34 197.84 718440000 0 174430000 3956500 23306000 16805000 23198000 45268000 23897000 33771000 64586000 61745000 85045000 47968000 56705000 57753000 49348 1691 44277 413850;413851;413852;413853;413854;413855;413856;413857;413858;413859;413860;413861;413862;413863;413864;413865 326395;326396;326397;326398;326399;326400;326401;326402;326403;326404;326405;326406;326407;326408;326409;326410;326411;326412 326396 16 SSSADSLSTTK Unmodified 1082.5091 0.5091475 5068 Q9UQ84 EXO1 Exonuclease 1 yes yes 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching 10 0 11 1 1 1 1 1 1 1 2 1 1 11.13 11.233 2 0.0019359 10254 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 70.028 44.291 35161000 0 0 0 1355800 1714000 2273800 2252200 2397300 2292400 2685800 0 0 3724500 3829100 12636000 49349 5068 44278 413866;413867;413868;413869;413870;413871;413872;413873;413874;413875;413876 326413;326414;326415 326415 3 SSSAGFSFGTGVINSTPAPANTIVTSENK Unmodified 2840.3828 0.38283136 1600 P49790 NUP153 Nuclear pore complex protein Nup153 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 84.024 84.169 3 0.00010326 97272 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 28.742 22.712 43108000 0 0 0 0 0 0 0 0 0 13240000 8498400 8469800 0 3935500 8964700 49350 1600 44279 413877;413878;413879;413880;413881 326416;326417 326417 2 SSSAPNEGLTK Unmodified 1089.5302 0.53021729 2594 Q15911 ZFHX3 Zinc finger homeobox protein 3 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 15.184 15.382 2 0.0012176 15151 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 74.267 52.57 41584000 0 0 0 0 3431400 2420500 3373600 2218300 2071800 2479800 3724900 6649800 4646800 5686700 4880100 49351 2594 44280 413882;413883;413884;413885;413886;413887;413888;413889;413890;413891;413892 326418;326419 326419 2 SSSATASQPPESLPQPGLQK Unmodified 2009.0065 0.006548526 2736 Q5JSZ5 PRRC2B Protein PRRC2B yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 56.203 56.209 2 0.0040896 63150 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 35.737 32.699 29118000 0 0 0 1926300 2706000 3273200 3251800 2732300 2633900 4540800 3829000 0 0 4224600 0 49352 2736 44281 413893;413894;413895;413896;413897;413898;413899;413900;413901 326420 326420 1 SSSCESLGSQPAAARPPSVDSLSSASTSHSENSVHTK Unmodified 3741.7136 0.71363734 2327 Q13614 MTMR2 Myotubularin-related protein 2 yes yes 0 0 1 By matching By MS/MS 2 0 2 1 1 58.725 52.678 5 1.1733E-06 66263 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 31.368 29.55 22054000 7763400 0 14291000 0 0 0 0 0 0 0 0 0 0 0 0 49353 2327 44282 413902;413903 326421 326421 0 SSSDECEEITK Unmodified 1283.5187 0.51872591 3453 Q8NG31 CASC5 Protein CASC5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 16.052 16.306 2 0.0044032 15080 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.56 58.304 11134000 0 0 0 1208000 0 0 0 1014900 0 0 0 1971400 3312100 0 3627600 49354 3453 44283 413904;413905;413906;413907;413908;413909 326422;326423 326422 2 SSSDHHFNQTIGSASPSTAR Unmodified 2085.9464 0.94640789 2075 Q02413 DSG1 Desmoglein-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 25 3 3 2 2 3 2 1 2 2 3 2 30.698 30.805 3;4 1.1208E-18 33227 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 97.095 86.719 326560000 0 0 0 75504000 12144000 17205000 10739000 100980000 10358000 6351600 19580000 35271000 30271000 8155700 0 49355 2075 44284 413910;413911;413912;413913;413914;413915;413916;413917;413918;413919;413920;413921;413922;413923;413924;413925;413926;413927;413928;413929;413930;413931;413932;413933;413934 326424;326425;326426;326427;326428;326429 326426 4 SSSDLITLPATTPPCPTK Unmodified 1884.9503 0.9502792 2795 Q5TCZ1 SH3PXD2A SH3 and PX domain-containing protein 2A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 77.456 77.519 2 9.1784E-06 89357 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 74.76 43.888 27919000 0 0 0 0 4189800 3392900 4238400 3518000 0 0 5679600 0 3419000 3481600 0 49356 2795 44285 413935;413936;413937;413938;413939;413940;413941;413942 326430;326431;326432;326433;326434;326435 326431 6 SSSDNNTNTLGR Unmodified 1264.5644 0.56437097 5004 Q9ULT8 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 0 0 0 By MS/MS 10 0 1 1 8.8416 9.2472 2 5.5431E-05 7366 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 90.108 80.894 2325200 0 0 0 0 0 0 0 0 0 0 2325200 0 0 0 0 49357 5004 44286 413943 326436 326436 1 SSSDPGIPGGPQAIPATNSPDHSDHTLSVSSDSGHSTASAR Unmodified 3983.8118 0.81177148 2854 Q68CZ2 TNS3 Tensin-3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching 10 0 7 1 1 1 1 1 1 1 58.344 58.633 5 3.745E-07 66735 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 27.01 25.285 48826000 0 0 0 0 0 5025300 5065400 0 0 6792800 9408100 6508500 0 4665300 11361000 49358 2854 44287 413944;413945;413946;413947;413948;413949;413950 326437;326438;326439 326438 3 SSSDPGIPGGPQAIPATNSPDHSDHTLSVSSDSGHSTASARTDK Unmodified 4327.9814 0.98135601 2854 Q68CZ2 TNS3 Tensin-3 yes yes 0 0 1 By MS/MS 2 0 2 2 59.079 55.277 5;6 0.0054649 68838 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 15.021 13.682 19401000 0 0 19401000 0 0 0 0 0 0 0 0 0 0 0 0 49359 2854 44288 413951;413952 326440;326441 326440 2 SSSDSFEQFRR Unmodified 1344.6058 0.60584185 441 O60885 BRD4 Bromodomain-containing protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.092 37.272 3 0.0024536 41125 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 53.569 50.44 171170000 0 0 0 10094000 7463300 10298000 13083000 8529500 9190800 12103000 12209000 20224000 18067000 17567000 32337000 49360 441 44289 413953;413954;413955;413956;413957;413958;413959;413960;413961;413962;413963;413964 326442;326443;326444;326445;326446;326447;326448;326449 326443 4 SSSEAKPTSLGLAGGHK Unmodified 1625.8373 0.83729835 3968 Q96RK0 CIC Protein capicua homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 25.167 25.625 3 0.021173 26664 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 21.378 16.474 38622000 0 0 0 0 0 0 0 0 0 10917000 0 12124000 0 7212900 8369100 49361 3968 44290 413965;413966;413967;413968 326450 326450 1 SSSEDAESLAPR Unmodified 1247.563 0.56297399 2684 Q4G0J3 LARP7 La-related protein 7 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 30.354 30.685 2 0.00088849 32117 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 73.067 43.594 14946000 0 0 0 0 1614100 0 0 0 0 0 0 4548000 2825700 2406300 3551800 49362 2684 44291 413969;413970;413971;413972;413973;413974 326451;326452;326453;326454;326455 326453 4 SSSFSSWDDSSDSYWK Unmodified 1869.733 0.73295244 4534 Q9NP61 ARFGAP3 ADP-ribosylation factor GTPase-activating protein 3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 75.965 76.077 2 3.4947E-19 87384 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 105.25 104.14 48502000 0 0 0 0 1945300 2681300 2006100 4352200 3748700 4666300 4894100 7009000 3358800 3168500 10672000 49363 4534 44292 413975;413976;413977;413978;413979;413980;413981;413982;413983;413984;413985 326456;326457;326458;326459;326460;326461;326462;326463 326459 8 SSSGAEHPEPK Unmodified 1124.5098 0.5098162 3025 Q70E73 RAPH1 Ras-associated and pleckstrin homology domains-containing protein 1 yes yes 0 0 0 By MS/MS By matching 2.33 0.471 2 1 2 1 5.9845 3.0489 2 0.00095336 4340 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 93.111 80.074 81602000 0 79628000 1974500 0 0 0 0 0 0 0 0 0 0 0 0 49364 3025 44293 413986;413987;413988 326464;326465 326465 2 SSSGFVGLR Unmodified 908.47158 0.4715802 5061 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 43.536 43.783 2 0.014092 47549 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.815 38.295 59700000 0 0 0 0 3391200 9435100 0 7112000 0 8115800 0 11622000 7686100 5963900 6373900 49365 5061 44294 413989;413990;413991;413992;413993;413994;413995;413996 326466;326467;326468;326469 326468 4 SSSGLGSSGSLSQK Unmodified 1280.6208 0.62082322 2558 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 21.692 21.563 2 0.00021717 26612 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.67 102.37 196800000 0 15831000 0 9835500 7228700 10147000 14580000 12375000 9510600 20530000 17266000 24762000 21217000 12815000 20704000 49366 2558 44295 413997;413998;413999;414000;414001;414002;414003;414004;414005;414006;414007;414008;414009 326470;326471;326472;326473;326474;326475;326476;326477;326478 326471 7 SSSGLLEWESK Unmodified 1221.5877 0.58773217 1008 P14866 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.967 65.055 2 0.0035122 73489 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 73.067 73.067 367860000 0 0 0 13376000 12449000 25630000 25062000 28751000 21932000 29669000 36199000 39027000 23478000 34185000 78104000 49367 1008 44296 414010;414011;414012;414013;414014;414015;414016;414017;414018;414019;414020;414021 326479;326480;326481;326482;326483;326484;326485;326486;326487;326488;326489 326485 10 SSSGLNSEK Acetyl (Protein N-term) 949.43525 0.43525428 2348 Q13867 BLMH Bleomycin hydrolase yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.86 3.4 1 1 5 1 1 1 1 1 1 1 13.946 13.004 2 0.0021939 15824 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.639 48.677 49655000 6420500 6414200 0 19807000 0 3084600 0 3983900 0 0 4400600 5544300 0 0 0 49368 2348 44297 414022;414023;414024;414025;414026;414027;414028 326490;326491;326492;326493;326494 326491 5 SSSGPPHETAAPK Unmodified 1264.6048 0.60477922 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 9.2538 9.3769 3 0.0043312 7701 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 46.704 39.576 65209000 0 0 0 9395000 8874800 0 0 6303000 5122000 0 0 14140000 11062000 0 10312000 49369 5262 44298 414029;414030;414031;414032;414033;414034;414035 326495;326496;326497;326498;326499;326500 326498 5 SSSGQSSGYSQHGSGSGHSSGYGQHGSR Unmodified 2709.1148 0.11482321 104 CON__Q86YZ3;Q86YZ3 HRNR Hornerin yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 1 2 1 2 2 2 2 2 2 2 2 6.3851 6.5248 4;5 9.1539E-160 4676 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 183.47 183.4 + 266680000 0 0 0 7172300 1768200 14862000 2827200 69751000 8247700 19331000 21452000 29938000 52544000 17407000 21376000 49370 104 44299 414036;414037;414038;414039;414040;414041;414042;414043;414044;414045;414046;414047;414048;414049;414050;414051;414052;414053;414054;414055;414056;414057 326501;326502;326503;326504;326505;326506;326507;326508;326509;326510;326511;326512;326513;326514;326515;326516;326517 326513 12 SSSGQSSGYTQHGSGSGHSSSYEQHGSR Unmodified 2825.1622 0.16216733 104 CON__Q86YZ3;Q86YZ3 HRNR Hornerin yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 3 2 7.394 7.542 3;4;5 6.6452E-208 5164 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 198.09 198.08 + 87716000 0 0 0 1117900 0 3874000 0 23754000 0 6124500 12098000 22748000 17999000 0 0 49371 104 44300 414058;414059;414060;414061;414062;414063;414064;414065;414066;414067 326518;326519;326520;326521;326522;326523;326524 326520 6 SSSGSSSSYGQHGSGSR Unmodified 1613.6666 0.66660421 104 CON__Q86YZ3;Q86YZ3 HRNR Hornerin yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 5.6155 5.6701 3 1.6654E-16 3440 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 105.31 98.877 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49372 104 44301 414068;414069;414070;414071;414072;414073 326525;326526;326527;326528;326529;326530 326527 6 SSSGSTDSEESTDSEEEDGAK Unmodified 2132.7989 0.79891933 2727 Q5H9R7 PPP6R3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 10.402 10.525 2 0.0009051 8512 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.841 55.841 10312000 0 0 0 0 640780 969860 701090 614570 648550 1178800 0 1612100 0 0 3946200 49373 2727 44302 414074;414075;414076;414077;414078;414079;414080;414081 326531 326531 1 SSSHFNPDPDAETLYK Unmodified 1806.8061 0.8060578 2812 Q5VT79;P13928 ANXA8L2;ANXA8 Annexin A8-like protein 2;Annexin A8 yes no 0 0 0 By MS/MS By MS/MS By matching 2.2 0.4 4 1 1 3 1 59.79 54.063 2;3 2.5732E-31 69940 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 159.52 142.61 187540000 7137600 164460000 15940000 0 0 0 0 0 0 0 0 0 0 0 0 49374 2812 44303 414082;414083;414084;414085;414086 326532;326533;326534 326532 3 SSSHLPANSQDVQGYITNQSPESIVEEAQGK Unmodified 3299.5542 0.5542068 472 O75179 ANKRD17 Ankyrin repeat domain-containing protein 17 yes yes 0 0 0 By MS/MS 10 0 1 1 80.46 80.69 3 5.515E-34 92977 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.573 71.951 11431000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11431000 49375 472 44304 414087 326535 326535 1 SSSHSRAGQSAAGAAPGGGVDTRDAEMPATEK Acetyl (Protein N-term) 3097.4119 0.41191643 1124 P21333 FLNA Filamin-A yes yes 1 0 2 By MS/MS By MS/MS 2 0 2 1 1 43.5 38.234 4 3.3791E-167 48635 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 163.73 152.63 129050000 40416000 0 88632000 0 0 0 0 0 0 0 0 0 0 0 0 49376 1124 44305 414088;414089 326536;326537;326538 326538 3 SSSHTSLFSGSSSSTK Unmodified 1585.722 0.72199382 2866 Q6AWC2 WWC2 Protein WWC2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 5.2 3.92 3 2 1 1 1 1 1 27.367 24.854 3 8.8087E-05 35314 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.506 78.652 94014000 69211000 12465000 6607200 0 0 1371500 0 0 0 0 0 0 0 0 4358900 49377 2866 44306 414090;414091;414092;414093;414094 326539;326540;326541 326540 2 SSSIIGSSSASHTSQATSGANSK Unmodified 2151.004 0.0039823436 1732 P54132 BLM Bloom syndrome protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 25.045 24.134 3 2.4748E-07 33585 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.527 63.425 28953000 18564000 0 0 0 1095700 2249400 2119700 0 0 2683700 0 0 0 2240800 0 49378 1732 44307 414095;414096;414097;414098;414099;414100 326542;326543;326544 326544 3 SSSLEMTPYNTPQLSPATTPANK Unmodified 2434.1686 0.16860483 2463 Q14C86 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 75.385 74.753 2;3 1.8932E-55 91562 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 182.37 170.4 167070000 0 67376000 0 4856300 2681800 14664000 3794000 5754000 6427400 11027000 9083100 7993100 6722400 8308100 18385000 49379 2463 44308 414101;414102;414103;414104;414105;414106;414107;414108;414109;414110;414111;414112;414113;414114 326545;326546;326547;326548;326549;326550;326551;326552;326553;326554;326555;326556;326557;326558;326559;326560 326549 15 SSSLEMTPYNTPQLSPATTPANKK Oxidation (M) 2578.2585 0.25848247 2463 Q14C86 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 0 1 1 By MS/MS 2 0 1 1 65.199 59.282 3 0.00032931 75868 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 41.763 33.736 21174000 0 21174000 0 0 0 0 0 0 0 0 0 0 0 0 0 49380 2463 44309 414115 326561;326562 326561 4055 2 SSSLEMTPYNTPQLSPATTPANKK Unmodified 2562.2636 0.26356785 2463 Q14C86 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 69.513 68.532 3 2.6704E-19 87432 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.903 89.915 154390000 6741300 54481000 0 4335600 6227300 4581700 5738800 8273200 4650800 12337000 13845000 0 7045000 8688500 17443000 49381 2463 44309 414116;414117;414118;414119;414120;414121;414122;414123;414124;414125;414126;414127;414128 326563;326564;326565;326566;326567;326568 326563 6 SSSLGNLK Unmodified 804.43413 0.43413207 3180 Q86W92 PPFIBP1 Liprin-beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 21.145 21.391 2 0.0087129 21734 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 85.265 22.548 201130000 0 0 0 0 0 0 47650000 31755000 0 0 77242000 0 0 44485000 0 49382 3180 44310 414129;414130;414131;414132 326569;326570;326571;326572 326570 4 SSSLPASQNNLRH Unmodified 1409.7011 0.70113922 5128 Q9Y2Y0 ARL2BP ADP-ribosylation factor-like protein 2-binding protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.56 3.86 3 1 5 1 2 1 1 1 1 1 1 25.021 23.309 3 0.00056868 32358 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 59.935 47.057 785360000 534360000 132290000 92962000 0 0 2691500 0 0 0 5177100 7373300 5625100 0 4887700 0 49383 5128 44311 414133;414134;414135;414136;414137;414138;414139;414140;414141 326573;326574;326575;326576;326577;326578;326579;326580 326576 8 SSSLQDFDIR Unmodified 1166.5568 0.5567664 2142 Q07864 POLE DNA polymerase epsilon catalytic subunit A yes yes 0 0 0 By MS/MS 10 0 1 1 61.62 62.2 2 0.033145 70288 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.19 23.212 11269000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11269000 49384 2142 44312 414142 326581 326581 1 SSSMELHREENR Oxidation (M) 1489.658 0.65795378 2830 Q5VZ89 DENND4C DENN domain-containing protein 4C yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 6.1486 6.2493 3 0.0037679 4365 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 45.879 40.564 12551000 0 0 0 759690 1317900 1281200 1108500 1460700 1231300 1328400 1206000 0 1483200 1373700 0 49385 2830 44313 414143;414144;414145;414146;414147;414148;414149;414150;414151;414152 326582;326583 326583 4476 2 SSSMELHREENR Unmodified 1473.663 0.66303916 2830 Q5VZ89 DENND4C DENN domain-containing protein 4C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 10.534 10.749 3 0.0077236 8996 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 45.257 37.647 12824000 0 0 0 0 0 0 0 1927400 0 2134900 0 4751100 2109300 1901100 0 49386 2830 44313 414153;414154;414155;414156;414157 326584 326584 1 SSSMPDSGRPAFR Unmodified 1393.6408 0.64084715 2037 Q00536 CDK16 Cyclin-dependent kinase 16 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 32.201 32.374 3 0.023011 34204 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.685 18.786 72713000 0 0 0 3400600 3625200 7038500 5996500 5722200 3588100 4880900 9100500 7497000 0 4816500 17047000 49387 2037 44314 414158;414159;414160;414161;414162;414163;414164;414165;414166;414167;414168 326585 326585 1 SSSPAPADIAQTVQEDLR Unmodified 1883.9225 0.92248455 2263 Q13283 G3BP1 Ras GTPase-activating protein-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 83.029 83.092 2;3 3.6614E-38 96130 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 169.79 146.04 1025600000 0 0 0 20161000 75160000 80709000 56250000 63300000 70733000 136340000 104480000 153070000 59627000 82559000 123230000 49388 2263 44315 414169;414170;414171;414172;414173;414174;414175;414176;414177;414178;414179;414180;414181;414182;414183;414184;414185;414186;414187;414188;414189;414190;414191;414192 326586;326587;326588;326589;326590;326591;326592;326593;326594;326595;326596;326597;326598;326599;326600;326601;326602 326588 15 SSSPELVTHLK Unmodified 1196.6401 0.6401021 2146 Q07960 ARHGAP1 Rho GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 6 2 22 2 4 2 2 2 1 2 2 1 2 2 2 2 2 2 42.416 41.071 2;3 9.5993E-05 55694 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.75 96.599 2241800000 208760000 1020400000 388740000 43509000 28116000 16106000 60858000 33861000 9895100 77316000 71063000 72410000 59130000 52692000 98970000 49389 2146 44316 414193;414194;414195;414196;414197;414198;414199;414200;414201;414202;414203;414204;414205;414206;414207;414208;414209;414210;414211;414212;414213;414214;414215;414216;414217;414218;414219;414220;414221;414222 326603;326604;326605;326606;326607;326608;326609;326610;326611;326612;326613;326614;326615;326616;326617;326618;326619;326620;326621;326622 326605 13 SSSPFLSK Unmodified 851.43888 0.43888309 4752 Q9NYV4 CDK12 Cyclin-dependent kinase 12 yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By MS/MS 10 0 7 1 1 1 1 1 2 32.6 32.759 2 0.025559 35941 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 58.596 23.347 36177000 0 0 0 0 7643100 0 2706100 0 13896000 3783900 0 4248700 0 3899300 0 49390 4752 44317 414223;414224;414225;414226;414227;414228;414229 326623;326624 326624 2 SSSPVNVK Acetyl (Protein N-term) 858.4447 0.44469675 2046 Q00839 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 9.5 2.06 1 17 1 2 2 1 2 2 1 1 1 2 1 1 1 32.836 33.271 1;2 4.9089E-19 31766 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 172.15 111.64 2281800000 83095000 0 0 261330000 311530000 66869000 295750000 206870000 85872000 120440000 146950000 402090000 113430000 84181000 103400000 49391 2046 44318 414230;414231;414232;414233;414234;414235;414236;414237;414238;414239;414240;414241;414242;414243;414244;414245;414246;414247 326625;326626;326627;326628;326629;326630;326631;326632;326633;326634;326635;326636;326637 326636 9 SSSPVNVKK Acetyl (Protein N-term) 986.53966 0.53965977 2046 Q00839 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 1 0 1 By MS/MS By MS/MS 10 0 2 1 1 18.826 19.059 2 0.012015 19546 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 62.546 27.722 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49392 2046 44319 414248;414249 326638;326639 326638 2 SSSPVQVEEEPVR Unmodified 1441.7049 0.7048872 3290 Q8IZ21 PHACTR4 Phosphatase and actin regulator 4 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 43.377 43.438 2 0.003335 48646 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 54.259 37.234 3199200 0 0 0 0 0 0 3199200 0 0 0 0 0 0 0 0 49393 3290 44320 414250;414251 326640;326641 326641 2 SSSQENLLDEVMK Unmodified 1478.6923 0.6922736 2676 Q3V6T2 CCDC88A Girdin yes yes 0 0 0 By MS/MS 2 0 1 1 84.309 79.566 2 0.0032939 98896 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.313 73.449 39173000 0 39173000 0 0 0 0 0 0 0 0 0 0 0 0 0 49394 2676 44321 414252 326642 326642 1 SSSQIPAQPSVAK Unmodified 1298.683 0.68302954 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.719 34.903 2 3.7569E-07 38271 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 113.69 97.147 664780000 0 0 0 41333000 30946000 32813000 48921000 42681000 53380000 60613000 77964000 74801000 78095000 52461000 70771000 49395 5216 44322 414253;414254;414255;414256;414257;414258;414259;414260;414261;414262;414263;414264 326643;326644;326645;326646;326647;326648;326649;326650;326651;326652;326653;326654;326655;326656;326657 326647 13 SSSQPSSCCSDPSKPGGNVEGATQSLAEQMRK Unmodified 3366.4875 0.48746592 2303 Q13501 SQSTM1 Sequestosome-1 yes yes 0 0 2 By MS/MS 2 0 1 1 63.364 59.605 4 5.743E-10 73984 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 49.453 36.815 12856000 0 0 12856000 0 0 0 0 0 0 0 0 0 0 0 0 49396 2303 44323 414265 326658 326658 1 SSSQTSGSLVSK Unmodified 1166.5779 0.57789577 4733 Q9NXV6 CDKN2AIP CDKN2A-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 15.02 13.3 2 6.7077E-09 13548 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 143.89 105.8 63669000 8438600 18740000 0 0 0 0 0 12936000 0 0 23554000 0 0 0 0 49397 4733 44324 414266;414267;414268;414269;414270;414271;414272 326659;326660;326661;326662;326663;326664 326660 5 SSSQTSTSQLPSK Unmodified 1336.647 0.64703797 4733 Q9NXV6 CDKN2AIP CDKN2A-interacting protein yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 17.077 16.878 2 3.9761E-42 16117 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 176.95 127.23 271800000 5526000 0 136220 17924000 15020000 24065000 19261000 0 15185000 21392000 27612000 32301000 32014000 27918000 33448000 49398 4733 44325 414273;414274;414275;414276;414277;414278;414279;414280;414281;414282;414283;414284;414285 326665;326666;326667;326668;326669;326670;326671;326672;326673;326674 326668 10 SSSQVPPILQETDK Unmodified 1527.7781 0.77805214 3147 Q86UE4 MTDH Protein LYRIC yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 64.893 64.523 2 0.0040217 73031 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.706 13.443 103150000 0 39778000 0 2868900 3050200 3574800 5234400 3299000 3901000 5780800 6798700 8493300 5151200 5909700 9312500 49399 3147 44326 414286;414287;414288;414289;414290;414291;414292;414293;414294;414295;414296;414297;414298;414299 326675;326676;326677;326678;326679 326677 5 SSSRGPYESGSGHSSGLGHQESR Unmodified 2345.0381 0.038076439 104 CON__Q86YZ3;Q86YZ3 HRNR Hornerin yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 33 3 3 3 2 3 3 3 1 3 3 3 3 12.687 12.822 3;4;5 2.8931E-103 12037 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 171.29 155.98 + 619930000 0 0 0 54705000 20121000 52717000 19252000 171470000 33508000 59230000 13005000 79230000 63379000 29671000 23638000 49400 104 44327 414300;414301;414302;414303;414304;414305;414306;414307;414308;414309;414310;414311;414312;414313;414314;414315;414316;414317;414318;414319;414320;414321;414322;414323;414324;414325;414326;414327;414328;414329;414330;414331;414332 326680;326681;326682;326683;326684;326685;326686;326687;326688;326689;326690;326691;326692;326693;326694;326695;326696;326697;326698;326699;326700;326701;326702;326703 326700 22 SSSRGPYESR Unmodified 1124.521 0.52104959 104 CON__Q86YZ3;Q86YZ3 HRNR Hornerin yes no 0 0 1 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.341 6.4658 2 0.018511 4234 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 120.99 57.424 + 320910000 0 0 0 29698000 28215000 31500000 30414000 111700000 28163000 12499000 11798000 9825400 13760000 8860900 4474500 49401 104 44328 414333;414334;414335;414336;414337;414338;414339;414340;414341;414342;414343;414344 326704;326705;326706;326707 326705 4 SSSRQLSESFK Unmodified 1254.6204 0.62042929 2163 Q08945 SSRP1 FACT complex subunit SSRP1 yes yes 0 0 1 By MS/MS By matching By MS/MS 2 0 4 1 1 2 28.669 24.599 2;3 4.3565E-07 34741 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 129.89 91.097 570410000 462440000 23161000 84816000 0 0 0 0 0 0 0 0 0 0 0 0 49402 2163 44329 414345;414346;414347;414348 326708;326709 326708 0 SSSSEGGVSASPVPSVVSSSTAPSALHTLQSR Unmodified 3055.5058 0.50580004 4823 Q9P2N6 KANSL3 KAT8 regulatory NSL complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 77.249 77.235 3 4.1445E-08 89144 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 34.313 31.505 9240500 0 0 0 0 2856500 0 0 3009400 0 0 0 0 3374600 0 0 49403 4823 44330 414349;414350;414351 326710;326711 326710 2 SSSSGHYVSWVK Unmodified 1322.6255 0.62551466 1741 P54578 USP14 Ubiquitin carboxyl-terminal hydrolase 14 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.312 40.491 3 0.0035033 43749 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.551 47.85 229740000 0 0 0 8547700 4683400 27735000 11778000 6960200 5384300 23103000 26640000 28342000 14688000 17377000 54498000 49404 1741 44331 414352;414353;414354;414355;414356;414357;414358;414359;414360;414361;414362;414363 326712;326713;326714;326715;326716;326717 326714 4 SSSSGSVGESSSK Unmodified 1184.5157 0.51568944 72 CON__P13645;P13645 KRT10 Keratin, type I cytoskeletal 10 yes no 0 0 0 By MS/MS 1 0 1 1 106.45 111.71 2 0.0020585 92373 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 87.184 83.072 + 120180000 120180000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49405 72 44332 414364 326718 326718 1 SSSSGSVGESSSKGPR Unmodified 1494.691 0.69102805 72 CON__P13645;P13645 KRT10 Keratin, type I cytoskeletal 10 yes no 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 22 2 1 2 2 2 1 2 2 2 2 2 2 6.4063 6.54 2;3 6.7385E-14 4576 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 98.105 91.252 + 80148000 0 0 0 9118300 1014600 3386500 3083500 5194400 1066100 3872500 6216500 34424000 4871700 2853300 5046600 49406 72 44333 414365;414366;414367;414368;414369;414370;414371;414372;414373;414374;414375;414376;414377;414378;414379;414380;414381;414382;414383;414384;414385;414386 326719;326720;326721;326722;326723;326724;326725;326726 326725 8 SSSSLLASPGHISVK Unmodified 1468.7886 0.78855725 4 A0FGR8 ESYT2 Extended synaptotagmin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 55.212 55.265 3 0.01812 62145 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 21.458 5.1081 106790000 0 0 0 5491000 8024700 8705000 9289200 9479900 7468100 11183000 0 21450000 14944000 10754000 0 49407 4 44334 414387;414388;414389;414390;414391;414392;414393;414394;414395;414396 326727;326728;326729 326729 2 SSSSPLVVVSVK Unmodified 1187.6762 0.67615325 3746 Q96B01 RAD51AP1 RAD51-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 65.004 65.039 2 0.00067277 74340 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 76.143 60.992 121360000 0 0 0 6051800 10540000 8282300 18248000 14574000 13647000 10438000 15245000 15766000 0 8571000 0 49408 3746 44335 414397;414398;414399;414400;414401;414402;414403;414404;414405;414406;414407 326730;326731;326732;326733;326734;326735;326736;326737;326738;326739;326740 326734 11 SSSSPPAGAASAAISASEK Acetyl (Protein N-term) 1716.8166 0.81662249 2504 Q15172 PPP2R5A Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform yes yes 1 0 0 By MS/MS By MS/MS 1 0 2 1 1 99.85 102.93 3 3.9269E-06 83956 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 58.997 53.093 23464000 20034000 3430000 0 0 0 0 0 0 0 0 0 0 0 0 0 49409 2504 44336 414408;414409 326741;326742 326741 2 SSSSRFTDSK Unmodified 1100.5098 0.5098162 4533 Q9NP50 FAM60A Protein FAM60A yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 1 2 7.4038 4.7094 2 6.3589E-10 8487 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 170.68 120.56 70983000 57628000 0 13355000 0 0 0 0 0 0 0 0 0 0 0 0 49410 4533 44337 414410;414411;414412 326743;326744 326743 2 SSSSSAASDTATSTQRPLR Unmodified 1908.9137 0.91371077 3997 Q96T37 RBM15 Putative RNA-binding protein 15 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 20.77 21.021 3 1.4698E-08 21226 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 71.558 54.013 52059000 0 0 0 0 7865100 0 10779000 0 0 0 0 16112000 0 0 17303000 49411 3997 44338 414413;414414;414415;414416 326745;326746;326747;326748;326749 326747 5 SSSSSGVPYSPAIPNK Unmodified 1576.7733 0.77330111 5058 Q9UPT5 EXOC7 Exocyst complex component 7 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 54.904 53.005 2 0.00035926 67060 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.155 67.285 40298000 0 17576000 0 0 8500000 0 0 0 0 0 0 0 0 0 14222000 49412 5058 44339 414417;414418;414419;414420 326750;326751;326752;326753 326751 4 SSSSSQESLNRPFSSK Unmodified 1726.8122 0.81220581 456 O75122 CLASP2 CLIP-associating protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 29.716 29.933 3 3.7375E-05 32960 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 75.463 65.893 113430000 0 0 0 8169100 7708000 0 8481200 8100100 0 9829800 10213000 12592000 17101000 12437000 18800000 49413 456 44340 414421;414422;414423;414424;414425;414426;414427;414428;414429;414430 326754;326755;326756;326757;326758;326759;326760;326761;326762 326762 4 SSSSSQESLNRPLSAK Unmodified 1676.8329 0.83294126 3094 Q7Z460 CLASP1 CLIP-associating protein 1 yes yes 0 0 1 By MS/MS 10 0 1 1 25.139 25.826 2 0.0061707 27013 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 53.252 28.035 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49414 3094 44341 414431 326763 326763 1 SSSSSSQPEHSAMLVSTAASPSLIK Unmodified 2488.2115 0.21153228 1446 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 65.792 64.463 3 1.7845E-18 73545 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 72.227 69.584 1165000000 26292000 219460000 27760000 59545000 69562000 85302000 71125000 57488000 77129000 78949000 77392000 104260000 75984000 62995000 71777000 49415 1446 44342 414432;414433;414434;414435;414436;414437;414438;414439;414440;414441;414442;414443;414444;414445;414446;414447 326764;326765;326766;326767;326768;326769;326770;326771;326772;326773;326774;326775;326776;326777;326778;326779;326780;326781;326782;326783;326784;326785;326786 326784 23 SSSSTGSEVGGQSTGSNHK Unmodified 1792.7824 0.78236225 5055 Q9UPQ9 TNRC6B Trinucleotide repeat-containing gene 6B protein yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 6.2217 6.3548 3 5.3741E-05 4537 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 63.691 57.659 46792000 0 0 0 2287600 2823900 0 4930900 3682900 3730300 3503700 5804700 6394600 3720700 3381300 6531500 49416 5055 44343 414448;414449;414450;414451;414452;414453;414454;414455;414456;414457;414458 326787;326788;326789 326787 3 SSSSTNTSLLTSK Unmodified 1311.6518 0.65178899 4733 Q9NXV6 CDKN2AIP CDKN2A-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 32.156 31.645 2 1.7011E-15 35184 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 145.46 104.73 287530000 0 47860000 0 10975000 16144000 20014000 18978000 14404000 14153000 25361000 29157000 19862000 16803000 19299000 34519000 49417 4733 44344 414459;414460;414461;414462;414463;414464;414465;414466;414467;414468;414469;414470;414471;414472 326790;326791;326792;326793;326794;326795;326796;326797;326798;326799;326800;326801;326802;326803 326802 13 SSSSTTASSSPSTVIHGANSEPADSTEMDDK Unmodified 3082.3157 0.31567559 3590 Q8WXG6 MADD MAP kinase-activating death domain protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 46.017 46.268 3 6.4256E-20 52113 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 54.732 52.676 40550000 0 0 0 0 0 10342000 5587000 0 0 7201700 0 0 0 8525800 8893200 49418 3590 44345 414473;414474;414475;414476;414477 326804;326805;326806;326807 326805 4 SSSSVSSQGSVASSTGSPASIR Unmodified 2024.9611 0.9610549 4398 Q9H4H8 FAM83D Protein FAM83D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 2 1 2 2 1 1 1 1 1 1 38.403 38.648 2 7.4418E-30 42707 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 125.53 119.81 46067000 0 0 0 3884400 0 4138000 3827800 5421100 0 3643200 6206400 6340800 4724100 0 7880800 49419 4398 44346 414478;414479;414480;414481;414482;414483;414484;414485;414486;414487;414488;414489;414490 326808;326809;326810;326811;326812;326813;326814;326815;326816;326817 326813 10 SSSSVSSQGSVASSTGSPASIRTTDFHNPGYPK Unmodified 3282.5389 0.53889109 4398 Q9H4H8 FAM83D Protein FAM83D yes yes 0 0 1 By MS/MS 2 0 1 1 65.864 57.575 4 4.8446E-28 77352 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.459 65.264 9627900 9627900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49420 4398 44347 414491 326818 326818 0 SSSSVTTSETQPCTPSSSDYSDLQR Unmodified 2706.1563 0.15626182 1629 P50552 VASP Vasodilator-stimulated phosphoprotein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.438 51.594 3 2.4698E-62 58255 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 78.837 77.655 260730000 0 0 0 11985000 14046000 28216000 0 19117000 17210000 21657000 25170000 31335000 19873000 22549000 49573000 49421 1629 44348 414492;414493;414494;414495;414496;414497;414498;414499;414500;414501;414502;414503 326819;326820;326821;326822;326823;326824;326825;326826;326827;326828;326829;326830;326831;326832;326833;326834;326835;326836 326819 18 SSSSVTTSETQPCTPSSSDYSDLQRVK Unmodified 2933.3196 0.31963876 1629 P50552 VASP Vasodilator-stimulated phosphoprotein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 58.268 52.581 3 1.9839E-181 67754 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 199.46 196.53 263080000 19496000 236800000 6780500 0 0 0 0 0 0 0 0 0 0 0 0 49422 1629 44349 414504;414505;414506;414507 326837;326838;326839 326837 3 SSSSYHTWNTGTEGPFVER Unmodified 2140.945 0.9450109 3518 Q8TEQ6 GEMIN5 Gem-associated protein 5 yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 60.931 61.13 3 0.030154 69877 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 30.042 24.462 28167000 0 0 0 0 1102600 0 2627000 0 0 3786300 4003100 5156200 0 0 11492000 49423 3518 44350 414508;414509;414510;414511;414512;414513 326840;326841 326840 1 SSSTALTTNVTEQTEK Unmodified 1695.8163 0.81628814 3601 Q8WYP5 AHCTF1 Protein ELYS yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.056 39.236 2 6.8166E-11 43535 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 117.23 110.85 98069000 0 0 0 4289700 4961200 6971700 5913300 7036600 6001500 13471000 9643900 12595000 11010000 6399400 9776100 49424 3601 44351 414514;414515;414516;414517;414518;414519;414520;414521;414522;414523;414524;414525 326842;326843;326844;326845;326846;326847;326848;326849;326850;326851;326852;326853 326846 12 SSSTEPPPPVR Unmodified 1152.5775 0.57750184 3357 Q8N684 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 23.246 23.485 2 0.00034855 24553 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 99.136 90.223 344990000 0 0 0 0 20490000 18810000 29440000 21618000 17419000 25898000 33426000 44290000 34578000 39936000 59083000 49425 3357 44352 414526;414527;414528;414529;414530;414531;414532;414533;414534;414535;414536 326854;326855;326856;326857;326858;326859;326860;326861;326862;326863;326864 326855 8 SSSTEPPPPVRQEPSPK Unmodified 1818.9112 0.91119158 3357 Q8N684 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.54 28.734 3 4.0015E-05 29941 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.574 67.865 471290000 0 0 0 24076000 20638000 27015000 29698000 27171000 34443000 39529000 55521000 50060000 44185000 48408000 70550000 49426 3357 44353 414537;414538;414539;414540;414541;414542;414543;414544;414545;414546;414547;414548 326865;326866;326867;326868;326869;326870;326871;326872;326873;326874;326875;326876;326877;326878;326879;326880;326881 326867 16 SSSTEPPPPVRQEPSPKPNNK Unmodified 2272.1448 0.14477334 3357 Q8N684 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 yes yes 0 0 2 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 25.948 26.148 4 0.0002301 27915 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 32.833 24.338 105800000 0 0 0 7962900 9615000 2797600 8848100 7126600 3662900 10499000 11430000 11274000 9642300 8344000 14599000 49427 3357 44354 414549;414550;414551;414552;414553;414554;414555;414556;414557;414558;414559;414560 326882;326883;326884;326885;326886;326887 326886 6 SSSTFSGIK Unmodified 912.45526 0.45526144 3326 Q8N3U4 STAG2 Cohesin subunit SA-2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 27.742 27.992 2 0.02892 29930 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 48.794 33.355 99121000 0 0 0 6420800 0 11715000 8081600 8629600 4131000 12426000 7952400 10986000 7850200 10292000 10637000 49428 3326 44355 414561;414562;414563;414564;414565;414566;414567;414568;414569;414570;414571 326888;326889;326890 326889 3 SSSTGSSSSTGGGGQESQPSPLALLAATCSR Unmodified 2924.3418 0.34177118 856 P08047 SP1 Transcription factor Sp1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 1 2 2 2 1 2 2 2 2 2 2 86.272 86.346 2;3 1.409E-83 99831 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 115.61 114.55 567860000 0 0 0 19923000 30074000 34073000 39068000 43172000 31482000 56802000 56878000 57256000 49521000 46418000 103190000 49429 856 44356 414572;414573;414574;414575;414576;414577;414578;414579;414580;414581;414582;414583;414584;414585;414586;414587;414588;414589;414590;414591;414592;414593 326891;326892;326893;326894;326895;326896;326897;326898;326899;326900;326901;326902;326903;326904;326905;326906;326907;326908;326909 326895 19 SSSTSDILEPFTVER Unmodified 1666.805 0.80499517 2880 Q6GYQ0 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 yes yes 0 0 0 By MS/MS 10 0 1 1 80.807 80.885 2 0.033014 93881 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 54.7 30.318 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49430 2880 44357 414594 326910 326910 1 SSSTSESGDSDNMR Unmodified 1458.5529 0.55287959 472 O75179 ANKRD17 Ankyrin repeat domain-containing protein 17 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 7.029 7.1542 2 0.0099961 5197 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 40.589 40.589 13297000 0 0 0 0 1033300 1534200 1199500 2193500 0 1514500 0 1167500 1177000 1057900 2419900 49431 472 44358 414595;414596;414597;414598;414599;414600;414601;414602;414603 326911;326912 326911 2 SSSVGSSSSYPISPAVSR Unmodified 1753.8483 0.84825697 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.428 52.571 2 2.4337E-11 59443 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 111.39 98.035 129630000 0 0 0 7761800 8782300 10122000 11244000 7653500 6318400 11440000 13653000 16603000 11224000 10692000 14139000 49432 2501 44359 414604;414605;414606;414607;414608;414609;414610;414611;414612;414613;414614;414615 326913;326914;326915;326916;326917;326918;326919;326920;326921;326922;326923;326924 326914 12 SSSVLDSSLDHR Unmodified 1301.6212 0.62115757 4813 Q9P2B7 CFAP97 Cilia- and flagella-associated protein 97 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 37.261 37.601 3 0.013721 41897 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 32.068 22.534 58149000 0 0 0 0 0 4769200 0 5356200 4779300 6614000 8608200 9038500 6537300 5710900 6735300 49433 4813 44360 414616;414617;414618;414619;414620;414621;414622;414623;414624 326925;326926;326927 326925 3 SSSVPHPFQVTLLR Unmodified 1566.8518 0.85182621 2819 Q5VV41 ARHGEF16 Rho guanine nucleotide exchange factor 16 yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 77.303 77.438 3 0.0093573 88987 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.555 32.476 28354000 0 0 0 0 0 5672500 1592600 2373300 0 0 0 0 3003000 4071100 11641000 49434 2819 44361 414625;414626;414627;414628;414629;414630 326928 326928 1 SSSVSPSASFRGAEK Unmodified 1495.7267 0.72668527 2105 Q04727 TLE4 Transducin-like enhancer protein 4 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 33.632 28.822 3 0.0063566 40010 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.405 35.572 29354000 25139000 0 4215900 0 0 0 0 0 0 0 0 0 0 0 0 49435 2105 44362 414631;414632 326929;326930;326931 326929 3 SSSVSPSSWK Unmodified 1050.4982 0.49818889 3897 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 32.352 31.892 2 0.0023379 33696 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 84.615 66.629 143250000 0 70151000 0 9555500 9967200 0 0 0 8930300 0 10843000 14129000 10954000 8719800 0 49436 3897 44363 414633;414634;414635;414636;414637;414638;414639;414640;414641 326932;326933;326934;326935;326936 326934 5 SSTAISSIAADGEFLHELEEK Unmodified 2233.075 0.075022022 533 O75694 NUP155 Nuclear pore complex protein Nup155 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 2 3 1 92.941 87.663 3 1.701E-86 110788 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 154.75 146.66 436220000 120250000 307980000 7989500 0 0 0 0 0 0 0 0 0 0 0 0 49437 533 44364 414642;414643;414644;414645;414646;414647 326937;326938;326939;326940;326941;326942;326943;326944 326937 8 SSTATHPPGPAVQLNK Unmodified 1603.8318 0.83181904 2432 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 43.3 37.293 3 0.035764 51012 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 22.985 18.997 53669000 35846000 17823000 0 0 0 0 0 0 0 0 0 0 0 0 0 49438 2432 44365 414648;414649 326945 326945 1 SSTEEEMEIEK Unmodified 1310.5548 0.55477707 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 32.28 32.841 2 0.0050182 35753 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 60.064 23.479 42753000 0 0 0 0 0 0 0 0 0 0 9072200 12261000 9016800 0 12404000 49439 2446 44366 414650;414651;414652;414653 326946;326947;326948;326949 326948 4 SSTETCYSAIPK Unmodified 1342.6075 0.60748134 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 39.161 39.411 2 0.0065461 42524 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.434 40.2 92548000 0 0 0 0 2931600 6737200 6231800 0 4570600 8187200 15207000 11995000 5723400 9954200 21011000 49440 487 44367 414654;414655;414656;414657;414658;414659;414660;414661;414662;414663 326950;326951;326952;326953;326954 326951 5 SSTFNSQEPHNILPLASSQIR Unmodified 2325.1713 0.17132244 3532 Q8WTW3 COG1 Conserved oligomeric Golgi complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 76.523 76.583 3 0.020536 88399 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 23.601 16.613 11293000 0 0 0 0 0 3145500 0 0 0 4572600 0 0 3574900 0 0 49441 3532 44368 414664;414665;414666 326955 326955 1 SSTGCFSNK Unmodified 986.41274 0.4127447 2346 Q13835 PKP1 Plakophilin-1 yes yes 0 0 0 By MS/MS 10 0 1 1 8.8145 8.68 2 0.038908 7046 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 44.753 34.842 2424400 0 0 0 2424400 0 0 0 0 0 0 0 0 0 0 0 49442 2346 44369 414667 326956 326956 1 SSTGEASENGLEDIDR Unmodified 1678.7282 0.72820141 4089 Q9BQ70 TCF25 Transcription factor 25 yes yes 0 0 0 By MS/MS 10 0 1 1 44.703 44.753 2 2.0537E-08 50332 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 92.925 78.235 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49443 4089 44370 414668 326957 326957 1 SSTGPEPPAPTPLLAER Unmodified 1718.8839 0.88391419 5066 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 71.599 71.6 2 0.0028517 82220 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 56.122 46.69 75237000 0 0 0 6371400 7140400 7897000 7885600 7342600 5394900 7717700 0 15534000 9952600 0 0 49444 5066 44371 414669;414670;414671;414672;414673;414674;414675;414676;414677 326958;326959;326960;326961;326962;326963 326959 6 SSTINTIMGNK Unmodified 1164.5809 0.58087266 4317 Q9H089 LSG1 Large subunit GTPase 1 homolog yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 46.788 47.069 2 0.0031312 51782 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.654 49.878 27331000 0 0 0 0 0 3383700 0 3668600 2506700 3451700 4051500 0 0 4168700 6100400 49445 4317 44372 414678;414679;414680;414681;414682;414683;414684 326964 326964 1 SSTITVDQMK Oxidation (M) 1124.5383 0.53833914 2696 Q53EL6 PDCD4 Programmed cell death protein 4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 3 9 1 1 1 1 1 1 1 1 1 1 1 1 21.036 20.135 2 5.9568E-05 25028 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.16 82.804 188200000 14596000 62198000 1957900 0 0 10030000 17172000 8795100 11906000 17465000 14804000 0 11537000 0 17742000 49446 2696 44373 414685;414686;414687;414688;414689;414690;414691;414692;414693;414694;414695;414696 326965;326966;326967;326968;326969;326970;326971;326972;326973;326974 326969 4352 10 SSTITVDQMK Unmodified 1108.5434 0.54342452 2696 Q53EL6 PDCD4 Programmed cell death protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 37.162 36.421 2 0.00076616 39260 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 120.15 110.24 508510000 12669000 322640000 0 8334900 6904300 0 10175000 10970000 6664000 16870000 18453000 22854000 18557000 18697000 34721000 49447 2696 44373 414697;414698;414699;414700;414701;414702;414703;414704;414705;414706;414707;414708;414709 326975;326976;326977;326978;326979;326980;326981;326982;326983;326984;326985;326986;326987 326984 13 SSTIYSNSAESFLPGICK Unmodified 1959.9248 0.92479273 2492 Q15058 KIF14 Kinesin-like protein KIF14 yes yes 0 0 0 By MS/MS 2 0 1 1 86.198 81.423 2 0.0045751 101282 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.435 30.119 27112000 0 27112000 0 0 0 0 0 0 0 0 0 0 0 0 0 49448 2492 44374 414710 326988 326988 0 SSTLTSSRLATGEEEGGGSSSK Unmodified 2126.9927 0.99274896 731 P00519 ABL1 Tyrosine-protein kinase ABL1 yes yes 0 0 1 By MS/MS 2 0 1 1 34.723 31.38 3 0.003708 39601 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 35.973 25.028 3656300 0 0 3656300 0 0 0 0 0 0 0 0 0 0 0 0 49449 731 44375 414711 326989 326989 1 SSTPAQLAFMR Oxidation (M) 1223.5969 0.59685707 1663 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 53.167 53.42 2 0.00017752 60384 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 91.069 70.444 232000000 0 0 0 0 0 23401000 28867000 24156000 0 38620000 27215000 0 28560000 20400000 40784000 49450 1663 44376 414712;414713;414714;414715;414716;414717;414718;414719 326990;326991;326992;326993;326994;326995;326996;326997;326998;326999;327000 326992 2674 11 SSTPAQLAFMR Unmodified 1207.6019 0.60194245 1663 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.115 69.183 2 0.00043586 79351 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 85.38 56.653 271000000 0 0 0 12874000 20960000 17915000 22896000 25567000 8375400 19754000 30470000 34783000 27361000 0 50046000 49451 1663 44376 414720;414721;414722;414723;414724;414725;414726;414727;414728;414729;414730;414731 327001;327002;327003;327004;327005;327006;327007;327008;327009;327010;327011;327012 327003 10 SSTPEEVK Unmodified 875.42363 0.42362696 1165 P23528 CFL1 Cofilin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.72 1 3 1 11 2 2 1 1 1 1 1 1 1 1 1 1 1 1 14.792 14.419 2 0.0068825 6923 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 92.47 58.732 2987600000 1880700000 847520000 22728000 10947000 7187200 11574000 12118000 9870900 10386000 0 61603000 17963000 8204500 17261000 69552000 49452 1165 44377 414732;414733;414734;414735;414736;414737;414738;414739;414740;414741;414742;414743;414744;414745;414746;414747 327013;327014;327015;327016;327017;327018;327019;327020;327021;327022 327014 7 SSTPEEVKK Unmodified 1003.5186 0.51858998 1165 P23528 CFL1 Cofilin-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 7.0726 3.9891 2 0.0084224 5936 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.14 52.733 4797300000 169970000 4567100000 60171000 0 0 0 0 0 0 0 0 0 0 0 0 49453 1165 44378 414748;414749;414750;414751 327023;327024 327023 0 SSTPLHSPSPIR Unmodified 1277.6728 0.67279921 694 O95817 BAG3 BAG family molecular chaperone regulator 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 35.193 35.11 3 0.00092682 37748 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 56.122 47.377 152330000 0 0 0 22408000 20415000 0 26728000 0 32282000 0 0 0 0 50495000 0 49454 694 44379 414752;414753;414754;414755;414756;414757 327025;327026;327027;327028;327029;327030 327028 5 SSTPLPTISSSAENTR Unmodified 1646.8111 0.81114318 1446;1447 P42166;P42167 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 1 2 2 2 1 2 2 2 2 1 54.774 54.876 2;3 2.6745E-23 61024 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 118.76 109.8 1707300000 0 0 0 118580000 121790000 109940000 192950000 140860000 99746000 130520000 158960000 178320000 137050000 139770000 178800000 49455 1446;1447 44380 414758;414759;414760;414761;414762;414763;414764;414765;414766;414767;414768;414769;414770;414771;414772;414773;414774;414775;414776;414777;414778 327031;327032;327033;327034;327035;327036;327037;327038;327039;327040;327041;327042;327043;327044;327045;327046;327047;327048;327049;327050;327051;327052 327035 22 SSTPPGESYFGVSSLQLK Unmodified 1882.9313 0.93125832 5066 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 82.13 81.818 2 2.6912E-07 94400 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.486 64.328 123100000 0 32917000 0 2066900 6604700 4424500 4969000 5476700 6136200 9135900 9013300 16726000 5342400 7802900 12482000 49456 5066 44381 414779;414780;414781;414782;414783;414784;414785;414786;414787;414788;414789;414790;414791 327053;327054;327055;327056;327057;327058;327059;327060;327061;327062;327063;327064;327065 327057 13 SSTPSHGQTTATEPTPAQK Unmodified 1924.9126 0.91264814 165 O00512 BCL9 B-cell CLL/lymphoma 9 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.667 14.834 3 1.0133E-17 13645 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.261 57.646 112950000 0 0 0 5033700 4236800 5134500 5828200 5880900 7287500 9457300 14519000 8835900 10156000 11410000 25166000 49457 165 44382 414792;414793;414794;414795;414796;414797;414798;414799;414800;414801;414802;414803 327066;327067;327068;327069;327070;327071;327072;327073;327074;327075;327076;327077 327069 11 SSTPTTIFPIRAPQK Unmodified 1642.9043 0.90425571 3177 Q86W42 THOC6 THO complex subunit 6 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.483 69.558 3 0.0018087 79736 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 50.843 40.722 148760000 0 0 0 5691300 7859100 11379000 9241100 11353000 8750600 13659000 13638000 14579000 13375000 13845000 25392000 49458 3177 44383 414804;414805;414806;414807;414808;414809;414810;414811;414812;414813;414814;414815 327078;327079;327080;327081;327082;327083;327084;327085;327086;327087;327088;327089 327084 7 SSTQEEIK Unmodified 920.44509 0.44509068 5088 Q9Y281 CFL2 Cofilin-2 yes yes 0 0 0 By MS/MS 2 0 1 1 9.2438 5.6052 2 0.014218 9287 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.19 44.855 29973000 29973000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49459 5088 44384 414816 327090 327090 1 SSTQEEIKK Unmodified 1048.5401 0.5400537 5088 Q9Y281 CFL2 Cofilin-2 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 6.8713 3.5706 2 0.0016084 5716 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.98 92.663 178950000 0 178950000 0 0 0 0 0 0 0 0 0 0 0 0 0 49460 5088 44385 414817;414818 327091;327092;327093;327094 327093 4 SSTQFNK Acetyl (Protein N-term) 852.39775 0.39774656 4008 Q99439 CNN2 Calponin-2 yes yes 1 0 0 By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching 9.31 2.4 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 25.148 25.733 1;2 0.015398 19910 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 46.37 29.444 70454000 8471600 0 0 2839800 3145500 4402400 4752600 4099500 3016600 6471200 6548300 6551700 6413500 5354800 8386500 49461 4008 44386 414819;414820;414821;414822;414823;414824;414825;414826;414827;414828;414829;414830;414831 327095;327096;327097 327097 3 SSTRAPSPTK Unmodified 1030.5407 0.5407224 2513 Q15287 RNPS1 RNA-binding protein with serine-rich domain 1 yes yes 0 0 1 By MS/MS 2 0 1 1 7.1676 3.6525 2 0.0046562 6854 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 114.86 63.892 32473000 32473000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49462 2513 44387 414832 327098 327098 1 SSTRSQNPHGLK Acetyl (Protein N-term) 1352.6797 0.6796755 2328 Q13616 CUL1 Cullin-1 yes yes 1 0 1 By MS/MS 2 0 1 1 12.224 8.93 3 0.0036123 12185 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 49.081 12.397 35331000 0 35331000 0 0 0 0 0 0 0 0 0 0 0 0 0 49463 2328 44388 414833 327099 327099 1 SSTSETSLGEERAPDEGGAPVDK Unmodified 2318.051 0.050992116 2710 Q562E7 WDR81 WD repeat-containing protein 81 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 42.475 37.532 3 0.0011443 48811 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 44.632 36.411 20904000 0 20904000 0 0 0 0 0 0 0 0 0 0 0 0 0 49464 2710 44389 414834;414835 327100;327101 327100 2 SSTSPNLQK Acetyl (Protein N-term) 1002.4982 0.49818889 484 O75351 VPS4B Vacuolar protein sorting-associated protein 4B yes yes 1 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 22.071 22.267 2 0.0067271 23451 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 52.786 21.482 55966000 0 0 0 5692100 0 8091800 5262600 5031600 2988700 8349500 5436600 0 0 5631400 9481700 49465 484 44390 414836;414837;414838;414839;414840;414841;414842;414843;414844 327102;327103;327104;327105;327106 327102 5 SSTSSSVGTDVTEGPAHPAPHTR Unmodified 2277.0622 0.062165925 3432 Q8NEY1 NAV1 Neuron navigator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.67 1.6 1 23 1 2 2 2 2 2 2 2 2 2 2 1 2 30.659 30.567 3;4 4.8295E-34 33160 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 101.94 92.843 398070000 12040000 0 0 15820000 19672000 29494000 23164000 23243000 20598000 46314000 38298000 54540000 45276000 21028000 48584000 49466 3432 44391 414845;414846;414847;414848;414849;414850;414851;414852;414853;414854;414855;414856;414857;414858;414859;414860;414861;414862;414863;414864;414865;414866;414867;414868 327107;327108;327109;327110;327111;327112;327113;327114;327115;327116;327117;327118;327119;327120;327121;327122;327123;327124 327111 15 SSTTSMTSVPK Oxidation (M) 1140.5333 0.53325376 2252 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 12.505 12.732 2 0.0056092 11019 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.445 36.67 149990000 0 0 0 0 17017000 0 0 6327800 4721200 25194000 27153000 41845000 7620300 7032000 13077000 49467 2252 44392 414869;414870;414871;414872;414873;414874;414875;414876;414877 327125;327126;327127;327128 327125 3673 4 SSTTTTPVQSGANVVK Unmodified 1575.8104 0.8104149 2070 Q02086 SP2 Transcription factor Sp2 yes yes 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 10 0 13 1 1 1 1 1 1 1 1 2 1 1 1 36.278 36.502 2 0.0074453 39820 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 55.04 32.028 165490000 0 0 0 9801600 9822000 9506200 13964000 10258000 9822400 13838000 11678000 31133000 12281000 11724000 21666000 49468 2070 44393 414878;414879;414880;414881;414882;414883;414884;414885;414886;414887;414888;414889;414890 327129;327130;327131;327132 327130 4 SSTTVSSFANSK Unmodified 1214.5779 0.57789577 2332 Q13620 CUL4B Cullin-4B yes yes 0 0 0 By MS/MS 2 0 1 1 33.177 28.534 2 1.8198E-09 37221 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.5 105.87 202640000 0 202640000 0 0 0 0 0 0 0 0 0 0 0 0 0 49469 2332 44394 414891 327133 327133 1 SSTTVSSFANSKPGSAK Unmodified 1654.8162 0.81622856 2332 Q13620 CUL4B Cullin-4B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 31.772 30.467 3 0.024116 42745 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 22.646 14.261 37740000 19484000 0 0 3724200 3564900 0 6028700 0 0 0 0 0 0 0 4938600 49470 2332 44395 414892;414893;414894;414895;414896 327134;327135 327134 2 SSTVAPAQPDGAESEWTDVETR Unmodified 2332.0455 0.045512807 2072 Q02241 KIF23 Kinesin-like protein KIF23 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 2 2 2 2 2 1 2 1 1 2 1 1 66.501 66.521 2;3 8.4712E-20 76289 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 88.561 85.999 98959000 0 0 0 5198300 8199500 10892000 9311100 7472700 4193200 10859000 8820600 7862600 9986900 6437300 9726500 49471 2072 44396 414897;414898;414899;414900;414901;414902;414903;414904;414905;414906;414907;414908;414909;414910;414911;414912;414913;414914;414915 327136;327137;327138;327139;327140;327141;327142;327143;327144;327145;327146 327145 11 SSTVATLQGTPDHGDPR Unmodified 1737.8282 0.82819023 3231 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 34.154 34.338 3 0.044827 37946 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 24.041 17.002 64865000 0 0 0 5285300 5281400 4430200 4909100 0 4845800 5957300 7152700 12362000 3252000 4985400 6403800 49472 3231 44397 414916;414917;414918;414919;414920;414921;414922;414923;414924;414925;414926 327147 327147 1 SSTVGLVTLNDMK Unmodified 1363.7017 0.70171607 2403;5081 Q14320;Q9Y247 FAM50A;FAM50B Protein FAM50A;Protein FAM50B no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 73.336 73.404 2 0.00084891 84647 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 87.568 66.569 224460000 0 0 0 9611800 11046000 22037000 9944200 16058000 10979000 28027000 27622000 24223000 11070000 16995000 36848000 49473 2403;5081 44398 414927;414928;414929;414930;414931;414932;414933;414934;414935;414936;414937;414938;414939 327148;327149;327150;327151;327152;327153;327154;327155;327156;327157 327149 10 SSTVGLVTLNDMK Oxidation (M) 1379.6966 0.6966307 2403;5081 Q14320;Q9Y247 FAM50A;FAM50B Protein FAM50A;Protein FAM50B no no 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 59.796 58.28 2 0.00059615 66608 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 68.355 58.468 114290000 10202000 11240000 0 10601000 0 0 12748000 0 10948000 17142000 18467000 0 13388000 9550000 0 49474 2403;5081 44398 414940;414941;414942;414943;414944;414945;414946;414947;414948;414949 327158;327159;327160;327161;327162;327163;327164;327165;327166 327158 3941 6 SSTVTEAPIAVVTSR Unmodified 1516.8097 0.80968662 3496 Q8TD19 NEK9 Serine/threonine-protein kinase Nek9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.691 68.771 2 0.00063761 78907 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 62.89 48.984 68448000 0 0 0 2481400 4469200 5397600 3661600 3827600 5004900 6673800 7083500 5690900 4878800 7864600 11414000 49475 3496 44399 414950;414951;414952;414953;414954;414955;414956;414957;414958;414959;414960;414961 327167;327168;327169;327170;327171;327172;327173;327174;327175;327176;327177 327172 11 SSVAVLTQESFAEHR Acetyl (Protein N-term) 1701.8322 0.83221298 2033 Q00341 HDLBP Vigilin yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.56 3 2 1 13 2 1 1 1 1 1 1 1 1 1 2 1 1 1 79.712 79.056 2 8.1314E-59 97379 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 178.53 145.3 660380000 0 29534000 1629700 13413000 23515000 52068000 32533000 39794000 31616000 92618000 72705000 70045000 39296000 49108000 112510000 49476 2033 44400 414962;414963;414964;414965;414966;414967;414968;414969;414970;414971;414972;414973;414974;414975;414976;414977 327178;327179;327180;327181;327182;327183;327184;327185;327186;327187;327188;327189;327190;327191;327192;327193;327194;327195;327196;327197;327198;327199;327200;327201 327181 24 SSVDLEESSTK Unmodified 1180.5459 0.54592694 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.74 22.934 2 1.9273E-05 24398 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 125.48 115.57 146750000 0 0 0 8877200 7315500 8091200 9690800 8111100 8335700 14998000 18486000 28254000 15462000 0 19129000 49477 3443 44401 414978;414979;414980;414981;414982;414983;414984;414985;414986;414987;414988;414989 327202;327203;327204;327205;327206;327207;327208;327209;327210;327211;327212;327213 327212 12 SSVDPAIFAF Unmodified 1052.5179 0.51786169 166 O00534 VWA5A von Willebrand factor A domain-containing protein 5A yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 95.73 91.692 2 0.0041413 113465 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.041 83.474 33259000 0 33259000 0 0 0 0 0 0 0 0 0 0 0 0 0 49478 166 44402 414990;414991 327214 327214 1 SSVESLSQDVMR Oxidation (M) 1352.6242 0.62419403 3310 Q8N1B4 VPS52 Vacuolar protein sorting-associated protein 52 homolog yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 45.293 45.605 2 0.010607 51241 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 42.689 23.711 53172000 0 0 0 0 0 0 7688000 3868900 0 9559600 7585200 11875000 6815000 5780800 0 49479 3310 44403 414992;414993;414994;414995;414996;414997;414998 327215;327216 327215 4903 2 SSVESLSQDVMR Unmodified 1336.6293 0.62927941 3310 Q8N1B4 VPS52 Vacuolar protein sorting-associated protein 52 homolog yes yes 0 0 0 By MS/MS 10 0 1 1 60.121 60.707 2 0.0009629 68574 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.006 60.051 7216200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7216200 49480 3310 44403 414999 327217 327217 1 SSVETTPSVIQHVGQPPATPAK Unmodified 2230.1594 0.15936077 2989 Q6W2J9 BCOR BCL-6 corepressor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.408 60.513 3 1.4615E-05 69147 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 50.202 45.753 108220000 0 0 0 7080500 6340800 6796600 6372200 7560000 7789500 8973800 10879000 13903000 8264900 7744300 16516000 49481 2989 44404 415000;415001;415002;415003;415004;415005;415006;415007;415008;415009;415010;415011 327218;327219;327220;327221;327222;327223;327224;327225;327226;327227;327228;327229;327230 327221 13 SSVGETVYGGSDELSDDITQQQLLPGVK Unmodified 2921.4142 0.41419107 136 O00267 SUPT5H Transcription elongation factor SPT5 yes yes 0 0 0 By MS/MS By MS/MS 5 3.56 1 1 1 2 1 87.558 84.897 3 3.8355E-154 104732 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.05 115.47 350290000 0 345330000 0 0 0 0 0 0 0 4966500 0 0 0 0 0 49482 136 44405 415012;415013;415014 327231;327232 327232 2 SSVHQPGSHYCQGCAYK Unmodified 1964.8258 0.82576416 4788 Q9P021 CRIPT Cysteine-rich PDZ-binding protein yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 23.064 19.175 3 2.6416E-05 27421 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.574 68.45 19864000 18217000 0 1647400 0 0 0 0 0 0 0 0 0 0 0 0 49483 4788 44406 415015;415016 327233 327233 1 SSVINTLR Unmodified 888.50288 0.50288033 2345 Q13823 GNL2 Nucleolar GTP-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 38.696 38.958 2 0.0096391 43035 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 82.241 36.289 76641000 0 0 0 5287900 0 6926100 6969700 5590800 0 0 9710000 7593100 11823000 11484000 11257000 49484 2345 44407 415017;415018;415019;415020;415021;415022;415023;415024;415025 327234 327234 1 SSVLENFVGR Unmodified 1106.572 0.57202253 1630 P50570;Q05193;Q9UQ16 DNM2;DNM1;DNM3 Dynamin-2;Dynamin-1;Dynamin-3 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 72.225 72.196 2 0.0019244 82073 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 87.639 66.351 56896000 0 0 0 6150600 4978700 10108000 6439600 6941900 5981800 0 0 0 7638100 8657300 0 49485 1630 44408 415026;415027;415028;415029;415030;415031;415032;415033 327235;327236;327237;327238;327239;327240;327241 327238 7 SSVLESLVGR Unmodified 1045.5768 0.57677356 154 O00429 DNM1L Dynamin-1-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.641 75.702 2 0.0021721 86651 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.862 49.982 309300000 0 0 0 15223000 16090000 28812000 24026000 21451000 16375000 28740000 31804000 39122000 24143000 26046000 37474000 49486 154 44409 415034;415035;415036;415037;415038;415039;415040;415041;415042;415043;415044;415045 327242;327243;327244;327245;327246;327247;327248;327249;327250;327251;327252;327253 327245 11 SSVLIAQQTDTSDPEK Unmodified 1717.837 0.83702358 1495 P46060 RANGAP1 Ran GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45.454 44.633 2 6.4693E-50 50359 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 187.44 167.78 705630000 12920000 111950000 0 37481000 37637000 45867000 39627000 39323000 26580000 60338000 50778000 56803000 59623000 34817000 91886000 49487 1495 44410 415046;415047;415048;415049;415050;415051;415052;415053;415054;415055;415056;415057;415058;415059 327254;327255;327256;327257;327258;327259;327260;327261;327262;327263;327264;327265;327266;327267;327268;327269;327270;327271 327256 17 SSVLPSPSGR Unmodified 985.51926 0.51925868 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 35.117 35.197 2 0.018376 38487 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 48.423 28.637 114760000 0 0 0 0 20070000 0 0 0 20770000 0 0 0 39157000 34768000 0 49488 1364 44411 415060;415061;415062;415063 327272;327273;327274;327275 327272 2 SSVLQVSVLQSTK Unmodified 1374.7718 0.77184455 2892 Q6L8Q7 PDE12 2',5'-phosphodiesterase 12 yes yes 0 0 0 By MS/MS 10 0 1 1 71.717 72.119 2 0.0075784 82482 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.433 38.764 3964600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3964600 49489 2892 44412 415064 327276 327276 1 SSVNCPFSSQDMK Oxidation (M) 1501.6177 0.61772845 2152 Q08211 DHX9 ATP-dependent RNA helicase A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 34.058 33.255 2 6.8748E-06 41440 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.39 87.802 145430000 5919100 75853000 0 4488100 5937200 6242000 5054500 4656100 0 7755000 6618400 9057300 9297600 0 4556500 49490 2152 44413 415065;415066;415067;415068;415069;415070;415071;415072;415073;415074;415075;415076 327277;327278;327279;327280;327281;327282;327283;327284;327285;327286;327287 327280 3462 11 SSVNCPFSSQDMK Unmodified 1485.6228 0.62281383 2152 Q08211 DHX9 ATP-dependent RNA helicase A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46.308 45.477 2 2.2465E-13 57524 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 135.99 125.16 247660000 4140200 129950000 0 8985000 6522900 10774000 6044600 5655500 6052200 9406800 9773100 16234000 10903000 9833900 13382000 49491 2152 44413 415077;415078;415079;415080;415081;415082;415083;415084;415085;415086;415087;415088;415089;415090 327288;327289;327290;327291;327292;327293;327294;327295;327296;327297;327298;327299 327290 12 SSVNELTQK Unmodified 1004.5138 0.51383895 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 0 By MS/MS By MS/MS 5 3.56 1 1 1 2 1 22.399 19.844 2 0.0073568 25517 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.162 53.516 154550000 0 139200000 0 0 0 0 0 0 0 0 0 0 0 15346000 0 49492 2495 44414 415091;415092;415093 327300;327301 327300 2 SSVNSHMTQSTDSR Oxidation (M) 1551.6583 0.65834771 4733 Q9NXV6 CDKN2AIP CDKN2A-interacting protein yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 5.6808 5.7935 3 2.8357E-12 3202 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 101.3 85.165 182690000 0 0 0 18114000 11307000 13620000 16170000 10776000 0 20366000 12708000 18335000 16109000 17544000 27642000 49493 4733 44415 415094;415095;415096;415097;415098;415099;415100;415101;415102;415103;415104;415105 327302;327303;327304;327305;327306;327307;327308;327309;327310;327311;327312 327312 6111 9 SSVNSHMTQSTDSR Unmodified 1535.6634 0.66343309 4733 Q9NXV6 CDKN2AIP CDKN2A-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 2 2 1 1 2 2 2 10.266 10.384 2;3 0.00035344 9139 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 67.115 61.273 225300000 0 0 0 13472000 12310000 15414000 16591000 13644000 10184000 22637000 31260000 3968000 23292000 23098000 39432000 49494 4733 44415 415106;415107;415108;415109;415110;415111;415112;415113;415114;415115;415116;415117;415118;415119;415120;415121;415122;415123;415124;415125;415126;415127 327313;327314;327315;327316;327317;327318;327319;327320;327321;327322;327323;327324;327325 327314 10 SSVNSHMTQSTDSRQQSGSPK Oxidation (M) 2264.0088 0.0087501455 4733 Q9NXV6 CDKN2AIP CDKN2A-interacting protein yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 6.7693 3.903 3 1.0666E-08 6913 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.752 77.259 36401000 26178000 0 10223000 0 0 0 0 0 0 0 0 0 0 0 0 49495 4733 44416 415128;415129 327326;327327;327328 327327 6111 3 SSVNSHMTQSTDSRQQSGSPK Unmodified 2248.0138 0.013835523 4733 Q9NXV6 CDKN2AIP CDKN2A-interacting protein yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 14.375 11.21 4 1.2987E-17 16227 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 100.67 92.387 71494000 64001000 0 7493000 0 0 0 0 0 0 0 0 0 0 0 0 49496 4733 44416 415130;415131 327329 327329 1 SSVNSMEQPALQGSSR Oxidation (M) 1692.7737 0.77371182 3080 Q7Z3B3 KANSL1 KAT8 regulatory NSL complex subunit 1 yes yes 0 1 0 By MS/MS 10 0 1 1 27.142 27.615 2 0.0048743 29394 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 53.528 39.27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49497 3080 44417 415132 327330 327330 4694 1 SSVPASDDAYPEIEK Unmodified 1606.7362 0.7362469 709 O95997;Q9NZH5 PTTG1;PTTG2 Securin;Securin-2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 2 50.804 51.066 2 0.00022733 56704 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 85.845 73.979 156010000 0 0 0 0 0 0 0 0 0 28404000 53619000 0 31840000 42151000 0 49498 709 44418 415133;415134;415135;415136;415137 327331;327332;327333 327332 3 SSVPIPIPADTR Unmodified 1251.6823 0.68230126 3134 Q86TC9 MYPN Myopalladin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.428 72.499 2 0.022543 83821 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 48.44 28.606 111490000 0 0 0 6776900 6600900 10645000 8731300 12351000 5791200 10576000 10846000 10147000 9377900 7424100 12219000 49499 3134 44419 415138;415139;415140;415141;415142;415143;415144;415145;415146;415147;415148;415149 327334;327335;327336 327335 3 SSVPIPIPADTRDNEVNHALEQQEAK Unmodified 2857.4206 0.42061385 3134 Q86TC9 MYPN Myopalladin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 1 1 1 2 2 2 2 2 2 2 2 74.344 74.456 3;4 7.9877E-28 85451 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.659 78.2 601900000 0 0 0 7690200 16096000 27192000 15773000 55760000 47780000 70089000 54747000 77330000 49121000 58627000 121690000 49500 3134 44420 415150;415151;415152;415153;415154;415155;415156;415157;415158;415159;415160;415161;415162;415163;415164;415165;415166;415167;415168;415169 327337;327338;327339;327340;327341;327342;327343;327344;327345;327346;327347;327348 327341 12 SSVQEECVSTISSSK Unmodified 1626.7407 0.74068036 3042 Q7L0Y3 TRMT10C Mitochondrial ribonuclease P protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 36.546 36.553 2 0.015083 40572 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 43.084 37.239 3215000 0 0 0 0 0 3215000 0 0 0 0 0 0 0 0 0 49501 3042 44421 415170 327349 327349 1 SSVQQLNEQLEK Unmodified 1401.71 0.70997257 2788 Q5T9S5 CCDC18 Coiled-coil domain-containing protein 18 yes yes 0 0 0 By MS/MS 2 0 1 1 49.302 43.654 2 0.0045852 56732 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.619 56.629 10173000 0 10173000 0 0 0 0 0 0 0 0 0 0 0 0 0 49502 2788 44422 415171 327350 327350 1 SSVSDAPVHITASGEPVPISEESEELDQK Unmodified 3036.4411 0.4411341 199 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 76.731 75.6 3 4.1386E-121 93219 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 152.17 145.95 267020000 23326000 113300000 0 3847600 8014100 12137000 7001100 9322600 9839000 17328000 14687000 27582000 10342000 10300000 0 49503 199 44423 415172;415173;415174;415175;415176;415177;415178;415179;415180;415181;415182;415183;415184;415185 327351;327352;327353;327354;327355;327356;327357;327358;327359;327360;327361;327362;327363;327364;327365;327366 327354 16 SSVSHSVLSEMQVIEQETPVSAK Oxidation (M) 2487.2163 0.2162833 3358 Q8N6H7 ARFGAP2 ADP-ribosylation factor GTPase-activating protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 2 2 2 2 2 2 2 1 2 70.1 70.236 3 8.3365E-44 81124 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 109.05 95.032 143790000 0 0 0 0 6426200 12485000 8559500 10422000 7881600 17950000 20620000 16399000 6817100 5929400 30305000 49504 3358 44424 415186;415187;415188;415189;415190;415191;415192;415193;415194;415195;415196;415197;415198;415199;415200;415201;415202;415203;415204;415205;415206 327367;327368;327369;327370;327371;327372;327373;327374;327375;327376;327377;327378;327379;327380;327381;327382;327383;327384;327385;327386;327387 327374 4935 21 SSVSRVPCNVEGISPELEK Unmodified 2086.0365 0.036468446 3171 Q86VQ1 GLCCI1 Glucocorticoid-induced transcript 1 protein yes yes 0 0 1 By MS/MS 2 0 1 1 67.935 64.212 3 0.021945 79409 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 29.603 19.681 10556000 0 0 10556000 0 0 0 0 0 0 0 0 0 0 0 0 49505 3171 44425 415207 327388 327388 1 SSVTSAAAVSALAGVQDQLIEK Unmodified 2144.1325 0.13247732 4485 Q9HAF1 MEAF6 Chromatin modification-related protein MEAF6 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.7 3.52 2 1 7 2 1 2 2 2 1 88.46 87.505 2;3 9.6072E-12 108478 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.21 91.112 74629000 0 44989000 2988700 0 0 0 0 0 0 11875000 5919600 5944100 0 0 2913600 49506 4485 44426 415208;415209;415210;415211;415212;415213;415214;415215;415216;415217 327389;327390;327391;327392;327393 327390 4 SSVVALDVDQPGANYR Unmodified 1689.8322 0.83221298 485 O75362 ZNF217 Zinc finger protein 217 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 66.531 66.781 2 1.259E-12 76694 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 100.72 85.456 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49507 485 44427 415218;415219;415220;415221 327394;327395;327396;327397 327394 4 SSVVPSVILKPENIK Unmodified 1608.9451 0.94505789 2282 Q13415 ORC1 Origin recognition complex subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 75.07 74.891 3 0.0057257 85932 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.613 34.645 25621000 0 0 0 3649000 7534500 0 0 0 0 0 0 0 0 0 14438000 49508 2282 44428 415222;415223;415224 327398;327399;327400 327398 3 SSVYSPESNVRK Unmodified 1351.6732 0.67319314 317 O43314 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 yes yes 0 0 1 By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 21.841 22.044 3 0.036449 22860 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 26.541 17.108 71918000 0 0 0 5145700 3996700 8170400 12956000 0 0 5810500 5349100 11449000 4960300 0 14080000 49509 317 44429 415225;415226;415227;415228;415229;415230;415231;415232;415233 327401 327401 1 SSWRDCSEEEQK Unmodified 1539.626 0.62598495 4452 Q9H8M7 FAM188A Protein FAM188A yes yes 0 0 1 By MS/MS 2 0 1 1 18.198 15.713 3 0.036135 19933 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 37.18 31.696 3125000 0 0 3125000 0 0 0 0 0 0 0 0 0 0 0 0 49510 4452 44430 415234 327402 327402 1 SSWWIINPDGGK Unmodified 1358.6619 0.66190017 340 O43524 FOXO3 Forkhead box protein O3 yes yes 0 0 0 By MS/MS 2 0 1 1 90.249 82.119 2 0.030717 106719 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.108 30.321 6605200 6605200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49511 340 44431 415235 327403 327403 1 SSYIAASTAKPPK Unmodified 1319.7085 0.70851601 3072 Q7Z2T5 TRMT1L TRMT1-like protein yes yes 0 0 1 By MS/MS By matching 2 0 2 1 1 34.672 29.822 2 0.039473 41410 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.439 52.392 17700000 16708000 0 992480 0 0 0 0 0 0 0 0 0 0 0 0 49512 3072 44432 415236;415237 327404 327404 1 SSYLEYQK Unmodified 1016.4815 0.48147619 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.305 33.49 2 0.0067278 36993 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 98.418 78.714 167170000 0 0 0 6793400 7729900 17254000 8564600 8938200 7310400 16078000 20128000 18897000 11688000 16187000 27598000 49513 643 44433 415238;415239;415240;415241;415242;415243;415244;415245;415246;415247;415248;415249 327405;327406;327407;327408;327409;327410;327411;327412;327413;327414;327415 327415 9 SSYLPNSDPLHQSDTSK Unmodified 1874.8646 0.86463532 472 O75179 ANKRD17 Ankyrin repeat domain-containing protein 17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 51.529 50.645 2;3 9.2531E-08 65434 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.324 59.747 112110000 0 5954600 0 0 17713000 0 39585000 0 0 0 0 0 0 20973000 27883000 49514 472 44434 415250;415251;415252;415253;415254;415255;415256;415257;415258 327416;327417;327418;327419;327420;327421;327422;327423;327424;327425;327426;327427 327418 12 SSYPIWEDFNSK Unmodified 1471.662 0.66195975 3035 Q765P7 MTSS1L MTSS1-like protein yes yes 0 0 0 By MS/MS 2 0 1 1 84.304 79.56 2 0.031169 98930 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.676 46.719 24313000 0 24313000 0 0 0 0 0 0 0 0 0 0 0 0 0 49515 3035 44435 415259 327428 327428 1 SSYSRFSSSGGGGGGGR Unmodified 1561.6869 0.68694572 1354 P35527 KRT9 Keratin, type I cytoskeletal 9 yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 16.951 17.06 3 0.0088526 16896 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 32.858 21.384 + 46384000 0 0 0 3437800 2712800 2558600 0 16081000 2385000 3691800 0 6855700 8661300 0 0 49516 1354 44436 415260;415261;415262;415263;415264;415265;415266;415267 327429 327429 1 SSYYMIGEQK Oxidation (M) 1220.5383 0.53833914 1411 P40261 NNMT Nicotinamide N-methyltransferase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.12 3.72 4 2 10 2 3 1 1 1 1 1 1 1 1 1 1 1 39.242 37.412 2 1.0021E-05 47910 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.77 100.68 424140000 10486000 347540000 2716000 3430300 4210500 9742900 5546500 0 3597600 7963700 7018000 0 9530000 4456100 7901800 49517 1411 44437 415268;415269;415270;415271;415272;415273;415274;415275;415276;415277;415278;415279;415280;415281;415282;415283 327430;327431;327432;327433;327434;327435;327436;327437;327438;327439;327440;327441;327442 327436 2220 12 SSYYMIGEQK Unmodified 1204.5434 0.54342452 1411 P40261 NNMT Nicotinamide N-methyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 49.006 47.709 2 9.934E-06 61388 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.98 112.59 408200000 13844000 211330000 2705400 7504200 5721300 24616000 8551500 9605900 4179200 20594000 18670000 15716000 15927000 14271000 34962000 49518 1411 44437 415284;415285;415286;415287;415288;415289;415290;415291;415292;415293;415294;415295;415296;415297;415298;415299 327443;327444;327445;327446;327447;327448;327449;327450;327451;327452;327453;327454;327455;327456;327457;327458 327447 15 STAAEVQQVLNR Unmodified 1314.6892 0.68917755 4424 Q9H6T0;Q6NXG1 ESRP2;ESRP1 Epithelial splicing regulatory protein 2;Epithelial splicing regulatory protein 1 yes no 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 57.338 57.581 2 0.0036181 66078 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 78.759 65.722 110610000 0 0 0 0 8030500 0 0 0 0 22771000 19948000 24864000 0 0 34992000 49519 4424 44438 415300;415301;415302;415303;415304 327459 327459 1 STAALEEDAQILK Unmodified 1387.7195 0.71947463 2379;2488 Q14155;Q15052 ARHGEF7;ARHGEF6 Rho guanine nucleotide exchange factor 7;Rho guanine nucleotide exchange factor 6 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 68.005 67.161 2 1.4594E-25 85537 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 158.79 149.89 493580000 0 312510000 3544400 8990300 8310200 13693000 12298000 10410000 11705000 18419000 16997000 20377000 14690000 13134000 28506000 49520 2379;2488 44439 415305;415306;415307;415308;415309;415310;415311;415312;415313;415314;415315;415316;415317;415318;415319;415320 327460;327461;327462;327463;327464;327465;327466;327467;327468;327469;327470;327471;327472;327473;327474;327475;327476;327477 327463 18 STAALSGEAASCSPIIMPYK Unmodified 2052.986 0.98601278 2398 Q14244 MAP7 Ensconsin yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.87 3.84 5 1 9 1 4 1 1 1 1 1 1 1 1 1 1 78.539 77.91 2;3 9.5294E-199 96322 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 237.48 217.64 529340000 904220 345400000 314580 14456000 13291000 0 13003000 15542000 0 34932000 26539000 26891000 0 14192000 23871000 49521 2398 44440 415321;415322;415323;415324;415325;415326;415327;415328;415329;415330;415331;415332;415333;415334;415335 327478;327479;327480;327481;327482;327483;327484;327485;327486;327487;327488;327489 327481 5 STAALSGEAASCSPIIMPYK Oxidation (M) 2068.9809 0.9809274 2398 Q14244 MAP7 Ensconsin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 71.922 71.338 2 4.7598E-112 88676 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 190.03 167.8 72915000 0 20175000 0 5066800 6060800 0 6373500 0 0 0 9348000 12027000 6464300 0 7399700 49522 2398 44440 415336;415337;415338;415339;415340;415341;415342;415343 327490;327491;327492;327493;327494;327495;327496 327490 3930 6 STAAVPELK Acetyl (Protein N-term) 956.51786 0.51786169 4109 Q9BRJ7 NUDT16L1 Protein syndesmos yes yes 1 0 0 By MS/MS By MS/MS 1 0 2 1 1 103.41 106.49 2 0.015202 95690 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 53.968 35.237 12960000 6825000 6134800 0 0 0 0 0 0 0 0 0 0 0 0 0 49523 4109 44441 415344;415345 327497;327498 327498 1 STACQMLVCYAK Oxidation (M) 1446.6305 0.63054174 149 O00410 IPO5 Importin-5 yes yes 0 1 0 By MS/MS By MS/MS 2 0 4 2 2 55 48.027 2 0.00085354 62905 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.913 81.692 85399000 13102000 72297000 0 0 0 0 0 0 0 0 0 0 0 0 0 49524 149 44442 415346;415347;415348;415349 327499;327500;327501;327502 327500 207 4 STACQMLVCYAK Unmodified 1430.6356 0.63562712 149 O00410 IPO5 Importin-5 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 72.04 65.012 2 1.9366E-05 85497 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 108.81 95.454 234590000 33538000 201050000 0 0 0 0 0 0 0 0 0 0 0 0 0 49525 149 44442 415350;415351 327503;327504;327505 327505 3 STADALDDENTFK Acetyl (Protein N-term) 1467.6365 0.63653286 1614 P49959 MRE11A Double-strand break repair protein MRE11A yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 63.074 62.524 2 7.0434E-42 72043 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 204.5 193.01 261390000 6563900 0 0 13352000 13303000 19318000 22426000 15692000 14004000 24724000 27832000 26106000 24913000 21732000 31427000 49526 1614 44443 415352;415353;415354;415355;415356;415357;415358;415359;415360;415361;415362;415363;415364 327506;327507;327508;327509;327510;327511;327512;327513;327514;327515;327516;327517;327518;327519;327520;327521 327508 16 STADSGGEGLETAPK Unmodified 1418.6525 0.65251728 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 25.685 25.515 2 8.7277E-27 26877 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 128.85 120.53 223190000 0 11079000 0 14480000 19963000 20629000 20920000 0 17055000 16955000 16034000 23989000 18238000 15229000 28617000 49527 3443 44444 415365;415366;415367;415368;415369;415370;415371;415372;415373;415374;415375;415376;415377 327522;327523;327524;327525;327526;327527;327528;327529;327530;327531 327528 10 STAEFQR Unmodified 837.39808 0.39808091 4326 Q9H0E9 BRD8 Bromodomain-containing protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 13.329 13.487 2 0.034754 12363 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 71.141 34.166 24084000 0 0 0 0 1653700 2069700 1735700 3033400 0 2775600 3364000 3484900 4061200 1905500 0 49528 4326 44445 415378;415379;415380;415381;415382;415383;415384;415385;415386 327532;327533 327532 2 STAELEAEELEK Unmodified 1347.6406 0.64055561 5009 Q9ULW0 TPX2 Targeting protein for Xklp2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 50.369 49.739 2 6.0755E-20 55411 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 161.17 149.33 322430000 0 104420000 0 13979000 14922000 14637000 18274000 12747000 11631000 17341000 19243000 34344000 13180000 16042000 31663000 49529 5009 44446 415387;415388;415389;415390;415391;415392;415393;415394;415395;415396;415397;415398;415399;415400 327534;327535;327536;327537;327538;327539;327540;327541;327542;327543;327544;327545;327546;327547;327548;327549;327550;327551;327552;327553 327547 20 STAGDTHLGGEDFDNR Unmodified 1690.7183 0.71830543 934;1743 P11142;P54652 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.88 3.47 7 2 24 2 5 2 2 2 2 2 2 2 2 2 2 2 2 2 36.151 35.392 2;3 1.6419E-35 39079 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 183.06 176.82 10952000000 40908000 383220000 9045900 360840000 396560000 539330000 704750000 430220000 562720000 813280000 1036900000 991570000 698850000 1116600000 2867100000 49530 934;1743 44447 415401;415402;415403;415404;415405;415406;415407;415408;415409;415410;415411;415412;415413;415414;415415;415416;415417;415418;415419;415420;415421;415422;415423;415424;415425;415426;415427;415428;415429;415430;415431;415432;415433 327554;327555;327556;327557;327558;327559;327560;327561;327562;327563;327564;327565;327566;327567;327568;327569;327570;327571;327572;327573;327574;327575;327576;327577;327578;327579;327580 327575 25 STAGDTHLGGEDFDNRMVNHFIAEFK Oxidation (M) 2923.3195 0.3195196 934 P11142 HSPA8 Heat shock cognate 71 kDa protein yes yes 0 1 1 By MS/MS By MS/MS 1.75 0.433 1 3 3 1 90.678 86.743 3;4 1.529E-12 99633 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.049 69.821 209780000 174280000 35494000 0 0 0 0 0 0 0 0 0 0 0 0 0 49531 934 44448 415434;415435;415436;415437 327581;327582;327583;327584;327585 327584 1213 5 STAGDTHLGGEDFDNRMVNHFIAEFK Unmodified 2907.3246 0.32460498 934 P11142 HSPA8 Heat shock cognate 71 kDa protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.14 0.639 1 4 2 3 3 1 93.506 90.378 3;4;5 2.2666E-25 108645 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.357 92.78 458460000 394250000 58235000 5978400 0 0 0 0 0 0 0 0 0 0 0 0 49532 934 44448 415438;415439;415440;415441;415442;415443;415444 327586;327587;327588;327589;327590;327591;327592 327591 7 STAGDTHLGGEDFDNRMVSHLAEEFK Unmodified 2862.2879 0.28788512 1743 P54652 HSPA2 Heat shock-related 70 kDa protein 2 yes yes 0 0 1 By MS/MS 2 0 1 1 86.828 78.697 4 4.2661E-38 102591 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 111.58 105.48 32298000 32298000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49533 1743 44449 415445 327593 327593 1 STAGIMNAEAATK Unmodified 1263.6129 0.61290107 3238 Q8IWC1 MAP7D3 MAP7 domain-containing protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 37.496 37.24 2 0.00084261 40767 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 80.834 68.879 86578000 0 37308000 0 2677600 3183100 3099100 3715100 3256600 0 6475800 4789300 6631800 4455900 4380700 6605000 49534 3238 44450 415446;415447;415448;415449;415450;415451;415452;415453;415454;415455;415456;415457 327594;327595;327596;327597;327598;327599;327600;327601;327602;327603;327604 327602 11 STAISLFYELSENDLNFIK Unmodified 2203.1049 0.10486559 980 P13639 EEF2 Elongation factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.4 0.49 6 4 3 5 2 101.04 96.933 2;3 4.7829E-98 120040 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 193.32 184.16 962850000 378960000 568660000 15229000 0 0 0 0 0 0 0 0 0 0 0 0 49535 980 44451 415458;415459;415460;415461;415462;415463;415464;415465;415466;415467 327605;327606;327607;327608;327609;327610;327611;327612;327613;327614;327615;327616;327617 327605 12 STALQPYIK Unmodified 1019.5651 0.56514624 4615 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 49.796 49.691 2 0.0098039 56009 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 65.676 41.002 13158000 0 0 0 0 4551800 0 0 0 0 0 0 0 8606400 0 0 49536 4615 44452 415468;415469 327618;327619 327618 2 STALSRTTNNEK Unmodified 1320.6634 0.66335673 535 O75717 WDHD1 WD repeat and HMG-box DNA-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 9.6492 6.528 2 1.9507E-22 10937 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 191.33 191.33 102410000 86413000 11176000 4819000 0 0 0 0 0 0 0 0 0 0 0 0 49537 535 44453 415470;415471;415472 327620;327621;327622 327622 2 STAMNESSSGK Oxidation (M) 1113.4608 0.4608171 4240 Q9BY42 RTFDC1 Protein RTF2 homolog yes yes 0 1 0 By MS/MS 1 0 1 1 106.52 111.78 2 0.00032161 92488 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 108.15 94.151 14248000 14248000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49538 4240 44454 415473 327623 327623 5711 1 STANGPDKNEPEVEAEQPLCSSQSQCK Unmodified 2989.3029 0.30294284 3518 Q8TEQ6 GEMIN5 Gem-associated protein 5 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 48.036 42.774 3 5.3879E-21 55728 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.664 79.649 24750000 0 24750000 0 0 0 0 0 0 0 0 0 0 0 0 0 49539 3518 44455 415474;415475 327624 327624 1 STANNVEIHIPVPNDADSPK Unmodified 2117.0389 0.038911287 4232 Q9BXS5 AP1M1 AP-1 complex subunit mu-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.871 71.937 3 1.6133E-05 82666 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 59.512 49.982 133750000 0 0 0 5329900 4325400 14790000 7538800 6623900 5545000 13114000 14557000 15952000 8709200 10697000 26566000 49540 4232 44456 415476;415477;415478;415479;415480;415481;415482;415483;415484;415485;415486;415487 327625;327626;327627;327628;327629;327630;327631;327632;327633;327634;327635;327636;327637 327626 13 STAPASLSR Unmodified 888.46649 0.46649483 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 17.455 17.814 2 0.035371 17526 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 46.129 17.955 186960000 0 0 0 0 0 0 0 52331000 0 0 0 134630000 0 0 0 49541 1364 44457 415488;415489 327638 327638 1 STAPAVAYDSK Unmodified 1108.5401 0.5400537 3913 Q96KR1 ZFR Zinc finger RNA-binding protein yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 26.51 26.865 2 0.0052806 28384 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 59.426 46.838 117100000 0 0 0 0 0 0 12864000 14448000 11188000 0 4706500 25729000 16340000 12714000 19111000 49542 3913 44458 415490;415491;415492;415493;415494;415495;415496;415497 327639;327640;327641;327642 327641 4 STAPETAIECTQAPAPASEDEK Unmodified 2302.0271 0.027085551 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 9.53 2.01 1 18 1 2 2 2 2 1 3 1 1 1 2 1 53.845 53.92 2;3 5.3542E-18 56952 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 90.367 85.898 598640000 0 12365000 0 63997000 53110000 53284000 70354000 38329000 92105000 27722000 34983000 0 53600000 58682000 40113000 49543 2451 44459 415498;415499;415500;415501;415502;415503;415504;415505;415506;415507;415508;415509;415510;415511;415512;415513;415514;415515;415516 327643;327644;327645;327646;327647;327648;327649;327650;327651;327652;327653;327654;327655 327646 13 STAPLLDVFSSMLK Oxidation (M) 1523.7905 0.79053108 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 10 1 1 1 2 1 1 1 2 92.656 92.77 2 0.00069842 107267 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 61.435 49.388 45671000 0 0 0 0 2580000 3220500 2177900 10004000 2355900 6357400 5021300 13954000 0 0 0 49544 4139 44460 415517;415518;415519;415520;415521;415522;415523;415524;415525;415526 327656;327657;327658 327656 5633 3 STAQQELDGK Unmodified 1075.5146 0.51456723 1358 P35606 COPB2 Coatomer subunit beta' yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.612 14.776 2 0.0018227 14109 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 88.37 72.708 83340000 0 0 0 2705100 2397500 8411700 3166600 3600600 5996100 9564100 11400000 7874300 7317500 8925500 11981000 49545 1358 44461 415527;415528;415529;415530;415531;415532;415533;415534;415535;415536;415537;415538 327659;327660;327661;327662;327663;327664;327665;327666;327667;327668;327669 327660 11 STAQQELDGKPASPTPVIVASHTANK Unmodified 2646.3613 0.36130806 1358 P35606 COPB2 Coatomer subunit beta' yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 52.563 52.653 4 2.4534E-13 59537 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 49.186 46.713 87324000 0 0 0 0 8326400 5541800 15920000 10180000 5790800 15547000 14566000 0 0 11452000 0 49546 1358 44462 415539;415540;415541;415542;415543;415544;415545;415546 327670;327671;327672;327673;327674;327675;327676;327677;327678;327679 327671 10 STASLHVEEK Unmodified 1099.551 0.55095274 2807 Q5VST9 OBSCN Obscurin yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 20.987 17.688 2 0.0011676 23439 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.3 59.359 20191000 0 18554000 1636800 0 0 0 0 0 0 0 0 0 0 0 0 49547 2807 44463 415547;415548 327680 327680 1 STASSSSSSSSSQTPHPPSQR Acetyl (Protein N-term) 2130.9414 0.94138209 3171 Q86VQ1 GLCCI1 Glucocorticoid-induced transcript 1 protein yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 22.667 22.961 3 3.0141E-21 23667 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 94.057 90.867 43609000 0 0 0 0 2468900 0 3007000 0 0 6719900 4730400 7696000 6238500 6435800 6312800 49548 3171 44464 415549;415550;415551;415552;415553;415554;415555;415556 327681;327682;327683;327684;327685;327686;327687;327688;327689 327689 9 STATTVAPAGIPATPGPVNPPPPEVSNPSK Acetyl (Protein N-term) 2892.4869 0.4869025 2493 Q15059 BRD3 Bromodomain-containing protein 3 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 81.858 81.873 3 6.7693E-20 94831 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 54.66 51.932 16328000 0 0 0 0 2267900 3198400 0 0 0 4867100 0 0 0 0 5994500 49549 2493 44465 415557;415558;415559;415560 327690 327690 1 STAVPSAGDTAPEQDSVER Unmodified 1915.8759 0.87592828 3559 Q8WVB6 CHTF18 Chromosome transmission fidelity protein 18 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 40.12 40.696 2 4.9466E-13 44855 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 109 96.729 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49550 3559 44466 415561;415562;415563;415564 327691;327692;327693;327694 327694 4 STAVPSAGDTAPEQDSVERR Unmodified 2071.977 0.97703931 3559 Q8WVB6 CHTF18 Chromosome transmission fidelity protein 18 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.161 36.342 3 1.4722E-22 40630 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 98.035 90.641 182030000 0 0 0 9846000 10835000 8503900 12972000 16534000 10959000 18722000 18116000 21671000 17988000 20724000 15155000 49551 3559 44467 415565;415566;415567;415568;415569;415570;415571;415572;415573;415574;415575;415576 327695;327696;327697;327698;327699;327700;327701;327702;327703;327704;327705;327706 327705 12 STAVTTSSAK Unmodified 951.48729 0.48728985 4972 Q9UKM9 RALY RNA-binding protein Raly yes yes 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 10.728 10.95 2 0.025912 9698 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 44.447 26.412 12034000 0 0 0 0 0 0 0 1810900 0 0 0 1415200 8807900 0 0 49552 4972 44468 415577;415578;415579 327707 327707 1 STAWLWVR Unmodified 1017.5396 0.53960019 2823 Q5VW36 FOCAD Focadhesin yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 80.437 80.51 2 0.04959 93034 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 47.067 30.291 12936000 0 0 0 0 935580 3602800 1017700 1609900 2295200 0 0 3474400 0 0 0 49553 2823 44469 415580;415581;415582;415583;415584;415585 327708 327708 1 STAYEDYYYHPPPR Unmodified 1757.7686 0.76855009 322 O43390 HNRNPR Heterogeneous nuclear ribonucleoprotein R yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 51.132 51.444 3 0.00029569 58183 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 69.716 63.812 63732000 0 0 0 0 0 0 13006000 9211300 0 0 6169200 0 0 11477000 23869000 49554 322 44470 415586;415587;415588;415589;415590;415591 327709;327710;327711;327712;327713 327709 2 STAYLSPQELEDVFYQYDVK Unmodified 2394.1267 0.12672324 3384 Q8NB16 MLKL Mixed lineage kinase domain-like protein yes yes 0 0 0 By MS/MS 2 0 1 1 98.864 94.13 2 2.3211E-37 116518 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.45 112.97 19147000 0 19147000 0 0 0 0 0 0 0 0 0 0 0 0 0 49555 3384 44471 415592 327714 327714 1 STCIYGGAPK Unmodified 1052.4961 0.4960804 1062;3670 P17844;Q92841 DDX5;DDX17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 29.19 28.53 2 0.0021396 29956 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.095 62.238 552510000 0 258240000 2383000 13340000 20035000 16197000 21908000 18434000 13566000 25501000 34253000 23062000 24116000 33681000 47793000 49556 1062;3670 44472 415593;415594;415595;415596;415597;415598;415599;415600;415601;415602;415603;415604;415605;415606;415607 327715;327716;327717;327718;327719;327720;327721;327722;327723;327724;327725;327726;327727;327728 327719 13 STCPLCRETFF Unmodified 1416.6166 0.61660624 589 O94822 LTN1 E3 ubiquitin-protein ligase listerin yes yes 0 0 1 By MS/MS 2 0 1 1 82.039 73.909 2 0.03669 96724 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.347 57.422 23756000 23756000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49557 589 44473 415608 327729 327729 1 STCSLTPALAAHFSENLIK Unmodified 2059.0408 0.040825542 4138 Q9BTA9 WAC WW domain-containing adapter protein with coiled-coil yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 84.344 84.484 3 0.0050018 97534 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.156 22.398 14799000 0 0 0 0 0 0 0 0 0 6257200 0 0 0 0 8541300 49558 4138 44474 415609;415610 327730 327730 1 STCTINYSK Unmodified 1072.4859 0.48590964 1573 P49419 ALDH7A1 Alpha-aminoadipic semialdehyde dehydrogenase yes yes 0 0 0 By MS/MS 10 0 1 1 19.792 20.412 2 0.015207 19994 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.59 38.859 10756000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10756000 49559 1573 44475 415611 327731 327731 1 STDADLAMSK Oxidation (M) 1053.4648 0.46483985 4581 Q9NQY0 BIN3 Bridging integrator 3 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 14.042 14.207 2 0.0042899 13510 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 64.711 40.756 23866000 0 0 0 0 2332400 2474900 2602300 1629900 1543600 2839600 2492100 0 2157900 1974400 3818500 49560 4581 44476 415612;415613;415614;415615;415616;415617;415618;415619;415620;415621 327732;327733 327733 5984 2 STDAYELK Unmodified 925.43928 0.43927702 1251;1545 P29508;P48594 SERPINB3;SERPINB4 Serpin B3;Serpin B4 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 2 1 1 1 1 1 1 1 1 1 1 1 25.823 25.99 1;2 0.00012194 27972 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 179.21 97.426 689640000 0 0 0 419710000 19570000 17692000 18298000 22731000 15797000 37114000 29166000 47805000 22850000 19487000 19418000 49561 1251;1545 44477 415622;415623;415624;415625;415626;415627;415628;415629;415630;415631;415632;415633;415634 327734;327735;327736;327737;327738;327739;327740 327740 5 STDDRGEPVTHYLVK Unmodified 1715.8479 0.84786304 4814 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.127 45.297 3 3.4843E-07 49488 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.519 67.842 176850000 0 0 0 7032200 5142500 10386000 9094500 16123000 14469000 14574000 14352000 23333000 20692000 15981000 25665000 49562 4814 44478 415635;415636;415637;415638;415639;415640;415641;415642;415643;415644;415645;415646 327741;327742;327743;327744;327745;327746;327747;327748 327741 8 STDEEEEAQTPQAPR Unmodified 1686.7333 0.73328679 4820 Q9P2K3 RCOR3 REST corepressor 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 26.81 27.056 2 9.1666E-31 28672 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 147.62 132.48 56333000 0 0 0 0 2938900 5572800 3217200 0 4036000 6421200 5686700 6829800 6619200 7021900 7988800 49563 4820 44479 415647;415648;415649;415650;415651;415652;415653;415654;415655;415656 327749;327750;327751;327752;327753;327754;327755;327756 327755 8 STDFLPVDCPVRSK Unmodified 1619.7977 0.79774172 2838 Q63HN8 RNF213 E3 ubiquitin-protein ligase RNF213 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 69.816 63.825 3 0.042068 78896 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 40.751 29.646 14634000 7916900 0 6717000 0 0 0 0 0 0 0 0 0 0 0 0 49564 2838 44480 415657;415658 327757 327757 0 STDFVFIPPEGK Unmodified 1335.6711 0.67106787 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 79.977 79.156 2 0.0011122 91430 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 88.056 56.635 136240000 0 70509000 1507000 7056400 7736100 8399600 9357900 12893000 0 0 0 0 10655000 8130600 0 49565 2804 44481 415659;415660;415661;415662;415663;415664;415665;415666;415667;415668;415669 327758;327759;327760;327761;327762;327763;327764;327765;327766;327767;327768;327769;327770 327764 13 STDGQEPHSVVYDTSNGK Unmodified 1919.8497 0.84971353 2708 Q53SF7 COBLL1 Cordon-bleu protein-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 28.109 27.269 3 0.0011539 34377 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 47.68 45.682 50779000 0 19551000 0 2036200 3246600 5379800 3424900 3570900 0 5230300 0 0 4380100 3958700 0 49566 2708 44482 415670;415671;415672;415673;415674;415675;415676;415677;415678;415679 327771;327772 327771 2 STDNAFENPFFK Unmodified 1415.6357 0.635745 2021 P98082 DAB2 Disabled homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 81.903 81.133 2 2.0672E-15 100672 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 150.61 138.03 1280300000 0 494100000 11441000 41838000 34740000 60377000 66208000 47889000 61774000 0 96516000 0 66494000 73432000 225530000 49567 2021 44483 415680;415681;415682;415683;415684;415685;415686;415687;415688;415689;415690;415691;415692;415693;415694 327773;327774;327775;327776;327777;327778;327779;327780;327781;327782;327783;327784;327785;327786;327787;327788;327789 327777 17 STDPVTTK Unmodified 847.42871 0.42871234 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 0 By MS/MS 10 0 1 1 8.2277 8.3994 2 0.035595 6402 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 52.403 19.045 5752000 0 0 0 0 0 0 0 0 5752000 0 0 0 0 0 0 49568 5216 44484 415695 327790 327790 1 STDQTVLEELASIK Unmodified 1532.7934 0.79336785 3984 Q96S59 RANBP9 Ran-binding protein 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 88.501 88.61 2 9.6072E-20 102562 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 138.75 131.63 48009000 0 0 0 0 1509000 2481400 1545200 2737400 2388200 5119300 6528100 5856500 2352100 4342500 13150000 49569 3984 44485 415696;415697;415698;415699;415700;415701;415702;415703;415704;415705;415706 327791;327792;327793;327794;327795;327796;327797;327798;327799;327800;327801;327802 327795 12 STDSEVSQSPAK Unmodified 1234.5677 0.56772501 470 O75175 CNOT3 CCR4-NOT transcription complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 10.79 10.929 2 1.1466E-08 10021 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 138.66 124.25 109140000 0 0 0 9816400 4773800 7944000 8658300 6241500 5319800 7574500 8689200 17439000 9865100 9183600 13637000 49570 470 44486 415707;415708;415709;415710;415711;415712;415713;415714;415715;415716;415717;415718 327803;327804;327805;327806;327807;327808;327809;327810;327811;327812;327813;327814 327803 11 STDSSSVSGSLQQETK Unmodified 1639.7537 0.75368788 4449 Q9H8G2 CAAP1 Caspase activity and apoptosis inhibitor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.297 30.489 2 9.6541E-29 31901 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 174.9 151.99 79622000 0 0 0 5148700 4844500 4538100 5620000 5188000 5666900 0 8056300 12364000 7624300 9081300 11490000 49571 4449 44487 415719;415720;415721;415722;415723;415724;415725;415726;415727;415728;415729;415730 327815;327816;327817;327818;327819;327820;327821;327822;327823;327824;327825;327826;327827;327828 327818 14 STDTSCQMAGLRDTYK Unmodified 1832.8033 0.80329739 4502 Q9HBM1 SPC25 Kinetochore protein Spc25 yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.427 42.604 3 0.00073563 46729 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 54.281 44.875 56283000 0 0 0 2379000 3054100 3665500 1700800 3055000 2525100 5185400 6337300 8125800 5446200 4906000 9903300 49572 4502 44488 415731;415732;415733;415734;415735;415736;415737;415738;415739;415740;415741;415742 327829;327830;327831;327832 327831 4 STDYGIFQINSR Unmodified 1399.6732 0.67319314 1855 P61626 LYZ Lysozyme C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.724 74.789 2 3.7221E-08 86124 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 147.74 144.25 414570000 0 0 0 30341000 17822000 20562000 49597000 57056000 15329000 21257000 37161000 67284000 46243000 19484000 32439000 49573 1855 44489 415743;415744;415745;415746;415747;415748;415749;415750;415751;415752;415753;415754 327833;327834;327835;327836;327837;327838;327839;327840;327841;327842;327843;327844;327845;327846 327843 14 STDYHGLLLPHIEGPEIK Unmodified 2018.0473 0.047291129 4292 Q9C0I1 MTMR12 Myotubularin-related protein 12 yes yes 0 0 0 By MS/MS 2 0 1 1 87.411 79.28 4 0.022727 103249 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 30.428 21.012 15216000 15216000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49574 4292 44490 415755 327847 327847 1 STEDGAELEEQK Unmodified 1334.5838 0.58376901 3226 Q8IVF2 AHNAK2 Protein AHNAK2 yes yes 0 0 0 By MS/MS 10 0 1 1 20.54 20.865 2 0.013041 20475 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 58.699 45.743 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49575 3226 44491 415756 327848 327848 1 STEEATSSALPEK Unmodified 1348.6358 0.63580458 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.089 27.286 2 0.00015613 29013 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 135.8 120.18 282820000 0 0 0 11361000 11226000 30403000 18707000 23144000 18411000 27206000 25636000 28675000 25679000 23072000 39296000 49576 1364 44492 415757;415758;415759;415760;415761;415762;415763;415764;415765;415766;415767;415768 327849;327850;327851;327852;327853;327854;327855;327856;327857;327858;327859 327857 10 STEEPIVK Unmodified 901.47566 0.47566253 2330 Q13618 CUL3 Cullin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 21.316 21.526 2 0.011784 22223 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 76.134 15.486 114880000 0 0 0 9485100 5090200 14233000 10502000 7725300 0 9587700 15187000 11519000 9383800 7896200 14269000 49577 2330 44493 415769;415770;415771;415772;415773;415774;415775;415776;415777;415778;415779 327860;327861;327862;327863;327864;327865;327866;327867;327868 327861 9 STEEQELEK Unmodified 1091.4982 0.49824846 5009 Q9ULW0 TPX2 Targeting protein for Xklp2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.027 15.198 2 1.2449E-06 14328 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 157.68 125.72 175590000 0 0 0 9367100 10246000 7620500 16301000 8184300 10062000 13630000 22251000 24368000 16241000 15628000 21686000 49578 5009 44494 415780;415781;415782;415783;415784;415785;415786;415787;415788;415789;415790;415791 327869;327870;327871;327872;327873;327874;327875;327876;327877;327878 327873 10 STELFSSTREEGSSGSGPSFR Acetyl (Protein N-term) 2246.0087 0.0087333705 1277 P30307 CDC25C M-phase inducer phosphatase 3 yes yes 1 0 1 By MS/MS By MS/MS 10 0 2 1 1 73.522 73.626 3 1.0841E-07 84870 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 67.227 62.325 15015000 0 0 0 0 0 0 0 0 0 15015000 0 0 0 0 0 49579 1277 44495 415792;415793 327879;327880 327879 2 STELLIR Unmodified 830.48617 0.48616764 1966 Q71DI3;Q16695;P84243;P68431;Q6NXT2 HIST2H3A;HIST3H3;H3F3A;HIST1H3A;H3F3C Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 46.99 47.075 2 0.021124 53323 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 107.22 27.283 562310000 0 0 0 108920000 59427000 59456000 61898000 0 0 78919000 61503000 0 64799000 0 67388000 49580 1966 44496 415794;415795;415796;415797;415798;415799;415800;415801 327881;327882;327883;327884 327881 4 STELLIRK Unmodified 958.58113 0.58113065 1966 Q71DI3;Q16695;P84243;P68431;Q6NXT2 HIST2H3A;HIST3H3;H3F3A;HIST1H3A;H3F3C Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 32.929 31.845 2 0.0078687 34585 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 127.31 77 1005300000 546960000 35969000 29549000 57381000 20687000 33707000 40627000 21839000 24392000 31374000 32041000 34519000 50724000 23120000 22440000 49581 1966 44497 415802;415803;415804;415805;415806;415807;415808;415809;415810;415811;415812;415813;415814;415815;415816;415817 327885;327886;327887;327888;327889;327890;327891;327892;327893;327894;327895;327896 327885 6 STELLLGVK Unmodified 958.5699 0.56989727 2966 Q6R327 RICTOR Rapamycin-insensitive companion of mTOR yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 71.536 66.376 2 0.010347 84522 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.095 45.997 34013000 0 34013000 0 0 0 0 0 0 0 0 0 0 0 0 0 49582 2966 44498 415818;415819 327897 327897 1 STENFQR Unmodified 880.40389 0.40389457 36 A8K2U0 A2ML1 Alpha-2-macroglobulin-like protein 1 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 10.627 10.742 2 0.025542 9336 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 80.555 70.805 5582600 0 0 0 4904100 0 0 0 0 0 0 0 0 0 0 678530 49583 36 44499 415820;415821 327898 327898 1 STEPSVTPDLLNFK Unmodified 1546.7879 0.78788854 2990 Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 82.741 82.785 2 0.0016384 96222 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 69.01 62.122 29117000 0 0 0 1328700 2140600 4046600 2704100 2443400 2660500 2972400 3365700 3311300 4143600 0 0 49584 2990 44500 415822;415823;415824;415825;415826;415827;415828;415829;415830;415831 327899;327900;327901;327902;327903;327904;327905;327906;327907 327904 9 STESFTSTSR Unmodified 1101.4938 0.49383179 2186 Q12774 ARHGEF5 Rho guanine nucleotide exchange factor 5 yes yes 0 0 0 By MS/MS 10 0 1 1 17.631 18.186 2 0.041102 17470 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.722 41.685 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49585 2186 44501 415832 327908 327908 1 STESLQANVQR Unmodified 1231.6157 0.61567826 1203 P26373 RPL13 60S ribosomal protein L13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 27.422 26.963 2 1.6367E-222 29059 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 244.76 200.95 1102900000 0 45644000 0 52642000 68442000 65815000 78957000 42608000 61087000 93791000 112910000 122170000 123470000 121180000 114230000 49586 1203 44502 415833;415834;415835;415836;415837;415838;415839;415840;415841;415842;415843;415844;415845;415846 327909;327910;327911;327912;327913;327914;327915;327916;327917;327918;327919;327920;327921;327922;327923;327924;327925;327926 327912 18 STESLQANVQRLK Unmodified 1472.7947 0.79470526 1203 P26373 RPL13 60S ribosomal protein L13 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 6 2 2 2 50.709 44.822 2;3 9.3718E-108 61288 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 261.87 235.93 371200000 234950000 72158000 64092000 0 0 0 0 0 0 0 0 0 0 0 0 49587 1203 44503 415847;415848;415849;415850;415851;415852 327927;327928;327929;327930;327931;327932;327933;327934 327930 6 STETAQQLK Unmodified 1004.5138 0.51383895 4381 Q9H3P2 NELFA Negative elongation factor A yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 10.871 11.009 2 0.012984 10046 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 99.375 82.411 58997000 0 0 0 3411200 3255600 5794400 4382800 2476400 4034100 5832200 4957600 5857300 5246400 4613000 9136100 49588 4381 44504 415853;415854;415855;415856;415857;415858;415859;415860;415861;415862;415863;415864 327935;327936;327937 327937 1 STFKAGCEMCVYK Unmodified 1579.6833 0.68330559 5343 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 2 3 2 43.273 38.111 3 0.00315 49641 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 52.555 45.673 + 641860000 511340000 96898000 33624000 0 0 0 0 0 0 0 0 0 0 0 0 49589 5343 44505 415865;415866;415867;415868;415869;415870;415871 327938;327939;327940;327941;327942;327943 327939 6 STFKAGCEMCVYK Oxidation (M) 1595.6782 0.67822022 5343 yes yes 0 1 1 By MS/MS By MS/MS 2 0 4 2 2 31.856 27.24 3 0.009818 38283 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.207 40.671 + 196560000 181500000 0 15058000 0 0 0 0 0 0 0 0 0 0 0 0 49590 5343 44505 415872;415873;415874;415875 327944;327945 327944 6734 2 STFNDVEK Unmodified 938.43453 0.434526 4371 Q9H2P0 ADNP Activity-dependent neuroprotector homeobox protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 21.224 21.197 2 0.034963 22094 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 52.786 30.163 23692000 0 0 0 7636200 3171700 0 0 0 4554200 8329900 0 0 0 0 0 49591 4371 44506 415876;415877;415878;415879 327946 327946 1 STFREESPLR Unmodified 1220.6149 0.61494998 4742 Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 33.915 34.109 3 0.006418 36983 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 48.284 14.296 274220000 0 0 0 14387000 17827000 21665000 0 19883000 17426000 20814000 30664000 28421000 39857000 26885000 36390000 49592 4742 44507 415880;415881;415882;415883;415884;415885;415886;415887;415888;415889;415890 327947;327948;327949 327948 2 STFSFSMTK Unmodified 1034.4743 0.47428232 1600 P49790 NUP153 Nuclear pore complex protein Nup153 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.559 62.654 2 0.031803 71581 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 47.603 35.076 100950000 0 0 0 5065200 4954800 6713300 5085300 6490400 4639000 9217700 10549000 11661000 9300600 10378000 16898000 49593 1600 44508 415891;415892;415893;415894;415895;415896;415897;415898;415899;415900;415901;415902 327950;327951;327952;327953 327950 4 STFSTNYR Unmodified 974.44576 0.44575938 814 P05783 KRT18 Keratin, type I cytoskeletal 18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.214 28.409 2 0.0017372 30254 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 149.4 127.85 2738400000 0 0 0 102850000 198880000 175550000 220490000 200380000 144990000 260510000 300910000 339040000 242320000 211910000 340560000 49594 814 44509 415903;415904;415905;415906;415907;415908;415909;415910;415911;415912;415913;415914 327954;327955;327956;327957;327958;327959;327960;327961;327962;327963;327964;327965 327963 6 STFSVEIVPICK Unmodified 1378.7166 0.71663786 3790 Q96D46 NMD3 60S ribosomal export protein NMD3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 86.119 80.991 2 0.016453 101819 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.1 63.432 140580000 12543000 125610000 2429000 0 0 0 0 0 0 0 0 0 0 0 0 49595 3790 44510 415915;415916;415917 327966;327967 327966 2 STFVLDEFK Unmodified 1084.5441 0.54407645 1211 P26641 EEF1G Elongation factor 1-gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.62 3.92 1 6 2 12 4 3 2 1 1 1 1 1 1 1 1 1 1 1 1 80.07 79.295 2 0.0049178 94385 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 112.84 101.2 8857300000 684280000 4908500000 504900000 118220000 87670000 346440000 563600 151530000 113310000 253270000 321060000 280750000 165810000 255700000 665240000 49596 1211 44511 415918;415919;415920;415921;415922;415923;415924;415925;415926;415927;415928;415929;415930;415931;415932;415933;415934;415935;415936;415937;415938 327968;327969;327970;327971;327972;327973;327974;327975;327976;327977;327978;327979;327980;327981;327982;327983;327984;327985;327986;327987;327988;327989;327990;327991 327986 24 STFVLDEFKR Unmodified 1240.6452 0.64518747 1211 P26641 EEF1G Elongation factor 1-gamma yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 2 1 2 2 2 2 2 2 2 68.908 69.035 2;3 0.013646 78391 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.89 18.261 173320000 0 0 0 7808200 0 18744000 7642200 3991300 10195000 15458000 18387000 28868000 13107000 15402000 33716000 49597 1211 44512 415939;415940;415941;415942;415943;415944;415945;415946;415947;415948;415949;415950;415951;415952;415953;415954;415955;415956;415957;415958;415959 327992;327993 327993 2 STFVNILK Unmodified 920.53312 0.53311783 1223 P27707 DCK Deoxycytidine kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 70.811 70.213 1;2 0.0072301 92899 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 178.08 47.046 162100000 11528000 0 0 7156000 8203600 0 7385700 9405000 6755300 12809000 18832000 22922000 14660000 14480000 27964000 49598 1223 44513 415960;415961;415962;415963;415964;415965;415966;415967;415968;415969;415970;415971 327994;327995;327996 327995 3 STGCDFAVSPK Unmodified 1167.523 0.52302343 1774 P55809 OXCT1 Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 5.57 3.85 3 1 3 1 2 1 1 1 1 39.02 36.372 2 0.0040648 46608 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.338 75.556 354160000 15027000 313440000 1244600 0 0 0 0 0 0 0 6112200 0 0 4318500 14019000 49599 1774 44514 415972;415973;415974;415975;415976;415977;415978 327997;327998;327999;328000;328001 327997 5 STGDGTLGRASEVEVK Unmodified 1604.8006 0.8005785 2661 Q32MZ4 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2.2 0.4 4 1 3 2 41.398 36.968 2;3 0.00074835 48103 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.038 51.293 379140000 0 356490000 22648000 0 0 0 0 0 0 0 0 0 0 0 0 49600 2661 44515 415979;415980;415981;415982;415983 328002;328003;328004 328002 3 STGDIAGTVVPETNK Unmodified 1487.7468 0.74675201 4867 Q9UDY2 TJP2 Tight junction protein ZO-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 50.282 50.214 2 5.1795E-07 56879 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 111.52 82.567 45609000 0 0 0 7448500 5740100 0 8366600 9445000 0 0 0 0 5361600 9247200 0 49601 4867 44516 415984;415985;415986;415987;415988;415989 328005;328006;328007 328005 3 STGDSFETRFEK Acetyl (Protein N-term) 1444.647 0.64703797 2296 Q13464 ROCK1 Rho-associated protein kinase 1 yes yes 1 0 1 By MS/MS 2.5 0.5 1 1 2 59.209 53.877 2 0.00061782 68999 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.51 73.127 31718000 0 31718000 0 0 0 0 0 0 0 0 0 0 0 0 0 49602 2296 44517 415990;415991 328008 328008 1 STGDVPHTSVTGDSGSGK Unmodified 1687.7649 0.76492127 1420 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 7.7 3.52 2 1 7 3 1 1 1 1 1 1 1 21.564 20.505 2;3 3.4836E-14 26015 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.97 101.68 219810000 0 157660000 0 0 4842400 6628400 0 5985900 5390200 13532000 0 10257000 0 0 15513000 49603 1420 44518 415992;415993;415994;415995;415996;415997;415998;415999;416000;416001 328009;328010;328011;328012;328013;328014 328011 5 STGDVPHTSVTGDSGSGKPFK Unmodified 2059.9811 0.98106206 1420 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 yes yes 0 0 1 By matching By MS/MS 2 0 2 1 1 39.993 35.723 3 0.012262 44613 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 29.84 20.909 9250200 0 5133400 4116900 0 0 0 0 0 0 0 0 0 0 0 0 49604 1420 44519 416002;416003 328015 328015 1 STGEAFVQFASK Unmodified 1270.6194 0.61936665 1308 P31942 HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 63.569 63.86 2 2.8123E-05 73199 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 119.53 103.65 173000000 0 0 0 0 0 0 0 14138000 0 27884000 23412000 24854000 19308000 15940000 47465000 49605 1308 44520 416004;416005;416006;416007;416008;416009;416010 328016;328017;328018;328019;328020;328021;328022;328023;328024 328016 9 STGEAFVQFASQEIAEK Unmodified 1840.8843 0.88430813 1309;1773 P55795;P31943 HNRNPH2;HNRNPH1 Heterogeneous nuclear ribonucleoprotein H2;Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 4 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 85.194 84.788 2 1.3112E-111 98096 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 197.36 175.13 762610000 718500 36389000 1910000 7071200 29138000 33261000 27096000 43581000 43142000 124960000 74412000 65893000 20489000 48723000 205830000 49606 1773;1309 44521 416011;416012;416013;416014;416015;416016;416017;416018;416019;416020;416021;416022;416023;416024;416025;416026 328025;328026;328027;328028;328029;328030;328031;328032;328033;328034;328035;328036;328037;328038 328026 14 STGEPLGHVPAR Unmodified 1219.6309 0.63093439 3706 Q93052 LPP Lipoma-preferred partner yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 2 1 2 2 1 2 2 2 2 2 2 29.724 29.951 2;3 0.0009394 32344 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 67.153 58.779 472160000 0 0 0 15363000 15707000 18064000 28212000 25359000 18466000 41002000 54058000 51609000 45391000 65289000 93637000 49607 3706 44522 416027;416028;416029;416030;416031;416032;416033;416034;416035;416036;416037;416038;416039;416040;416041;416042;416043;416044;416045;416046;416047 328039;328040;328041;328042;328043;328044;328045;328046;328047;328048;328049;328050;328051;328052;328053 328050 10 STGEPLGHVPARMETTHSFGNPSISVSTQQPPK Unmodified 3473.6998 0.6997656 3706 Q93052 LPP Lipoma-preferred partner yes yes 0 0 1 By MS/MS 2 0 1 1 76.169 68.038 5 0.00098693 89766 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 26.659 18.792 10854000 10854000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49608 3706 44523 416048 328054 328054 1 STGETAVSAFEIDK Unmodified 1453.6937 0.69365381 4957 Q9UK97 FBXO9 F-box only protein 9 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 69.434 64.169 2 9.0435E-48 81654 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 182.93 164.76 60146000 0 60146000 0 0 0 0 0 0 0 0 0 0 0 0 0 49609 4957 44524 416049;416050 328055 328055 1 STGETIR Unmodified 762.38718 0.38718187 1067 P17987 TCP1 T-complex protein 1 subunit alpha yes yes 0 0 0 By matching By MS/MS By matching By matching By matching 10 0 5 1 1 1 1 1 6.8538 6.9247 2 0.029029 4922 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 76.035 20.431 14579000 0 0 0 0 1497900 6226100 0 2719400 2589300 1546300 0 0 0 0 0 49610 1067 44525 416051;416052;416053;416054;416055 328056 328056 1 STGFETLVVTSEDGITK Unmodified 1782.8887 0.8887248 511 O75521 ECI2 Enoyl-CoA delta isomerase 2, mitochondrial yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 82.231 81.661 2 8.4206E-54 100932 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 149.69 140.01 146970000 0 85321000 2767000 1026400 4756600 7293100 4042800 4986700 5436200 9662400 8815800 0 3925000 8938700 0 49611 511 44526 416056;416057;416058;416059;416060;416061;416062;416063;416064;416065;416066;416067 328057;328058;328059;328060;328061;328062;328063;328064;328065;328066 328060 10 STGGAPTFNVTVTK Unmodified 1378.7092 0.70924429 846 P07737 PFN1 Profilin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.8 4.06 3 8 2 12 5 6 2 1 1 1 1 1 1 1 1 1 1 1 1 65.064 63.007 2;3 8.0916E-31 75461 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 166.14 143.5 21269000000 1396100000 15562000000 124470000 91495000 86564000 109550000 146930000 110570000 78545000 170540000 728770000 415050000 137960000 563440000 1546800000 49612 846 44527 416068;416069;416070;416071;416072;416073;416074;416075;416076;416077;416078;416079;416080;416081;416082;416083;416084;416085;416086;416087;416088;416089;416090;416091;416092 328067;328068;328069;328070;328071;328072;328073;328074;328075;328076;328077;328078;328079;328080;328081;328082;328083;328084;328085;328086;328087;328088;328089;328090;328091;328092;328093;328094;328095;328096;328097;328098;328099;328100;328101;328102;328103;328104;328105;328106;328107;328108;328109;328110;328111;328112 328078 45 STGGDFGNPLRK Acetyl (Protein N-term) 1289.6364 0.6364137 1105 P20340 RAB6A Ras-related protein Rab-6A yes yes 1 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 51.991 50.692 2 1.4423E-16 58295 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 140.83 122.69 367080000 7511700 93888000 0 30563000 17091000 0 24013000 34176000 0 0 0 42706000 35853000 34282000 46997000 49613 1105 44528 416093;416094;416095;416096;416097;416098;416099;416100;416101;416102 328113;328114;328115;328116;328117;328118;328119;328120;328121;328122;328123 328123 10 STGHTPTKPSGSSVSEK Unmodified 1685.822 0.82204222 3463 Q8NI08 NCOA7 Nuclear receptor coactivator 7 yes yes 0 0 1 By MS/MS By MS/MS 2 0 4 2 2 11.754 8.6563 3;4 0.0058872 13195 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 30.974 22.797 66651000 57821000 0 8830300 0 0 0 0 0 0 0 0 0 0 0 0 49614 3463 44529 416103;416104;416105;416106 328124;328125;328126 328124 3 STGLELETPSLVPVK Unmodified 1568.8661 0.86613887 3955 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 83.142 83.205 2 3.6353E-27 96238 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 134.75 119.48 892590000 0 0 0 22419000 36409000 53250000 49661000 56830000 58250000 89773000 108260000 119570000 77535000 86308000 134330000 49615 3955 44530 416107;416108;416109;416110;416111;416112;416113;416114;416115;416116;416117;416118 328127;328128;328129;328130;328131;328132;328133;328134;328135;328136;328137 328128 11 STGLELETPSLVPVKK Unmodified 1696.9611 0.96110188 3955 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 76.459 76.508 3 0.002249 88352 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 27.032 23.199 94674000 0 0 0 4461600 9667800 3843900 11639000 10980000 5854700 8777600 12176000 13879000 0 0 13395000 49616 3955 44531 416119;416120;416121;416122;416123;416124;416125;416126;416127;416128 328138;328139;328140;328141;328142;328143;328144;328145;328146 328144 9 STGLILDSGATHTTAIPVHDGYVLQQGIVK Unmodified 3090.635 0.63496372 716 O96019 ACTL6A Actin-like protein 6A yes yes 0 0 0 By MS/MS 10 0 1 1 81.735 81.938 3 1.2674E-19 94487 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.605 43.188 8296600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8296600 49617 716 44532 416129 328147 328147 1 STGNFLTLTQAIDK Unmodified 1507.7882 0.7882229 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.26 3.91 9 2 12 2 6 3 1 1 1 1 1 1 1 1 1 1 1 1 85.26 83.385 2;3 2.3679E-61 96198 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 184.03 159.17 2418000000 342360000 1497900000 37655000 7065400 15662000 30212000 18343000 28108000 29209000 72632000 53090000 73211000 37148000 54801000 120550000 49618 4819 44533 416130;416131;416132;416133;416134;416135;416136;416137;416138;416139;416140;416141;416142;416143;416144;416145;416146;416147;416148;416149;416150;416151;416152 328148;328149;328150;328151;328152;328153;328154;328155;328156;328157;328158;328159;328160;328161;328162;328163;328164;328165;328166;328167;328168;328169 328155 21 STGQELEEAVQNR Unmodified 1459.6903 0.69029976 572 O76027 ANXA9 Annexin A9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 49.662 49.649 2 5.3333E-08 56558 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 102.52 85.498 30236000 0 0 0 0 8362100 0 8806500 0 0 0 13068000 0 0 0 0 49619 572 44534 416153;416154;416155;416156 328170;328171;328172;328173;328174 328173 5 STGRVPTQEPTHREPTR Unmodified 1947.9875 0.98748484 2839 Q63ZY3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 yes yes 0 0 2 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 1 2 2 2 2 1 2 1 2 2 2 14.292 14.474 4;5 3.5668E-05 13268 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 62.475 52.007 259410000 0 0 0 7812200 6048100 27698000 15084000 20409000 19363000 16699000 30460000 15983000 33115000 25772000 40968000 49620 2839 44535 416157;416158;416159;416160;416161;416162;416163;416164;416165;416166;416167;416168;416169;416170;416171;416172;416173;416174;416175;416176 328175;328176;328177;328178;328179 328179 4 STGSATSLASQGER Unmodified 1350.6375 0.63753591 2759 Q5SW79 CEP170 Centrosomal protein of 170 kDa yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.076 22.284 2 1.7306E-100 22270 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 244.01 229.33 208590000 0 0 0 13311000 8818700 18006000 11985000 13150000 13442000 24735000 21220000 24627000 21163000 16455000 21673000 49621 2759 44536 416177;416178;416179;416180;416181;416182;416183;416184;416185;416186;416187;416188 328180;328181;328182;328183;328184;328185;328186;328187;328188;328189;328190;328191 328183 12 STGSLLTPTRGESEK Unmodified 1561.7948 0.79476484 2776 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 31.95 32.169 3 0.00090343 34822 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 53.995 35.264 82855000 0 0 0 0 14384000 0 0 8465400 8156900 10311000 13392000 19769000 0 8378300 0 49622 2776 44537 416189;416190;416191;416192;416193;416194;416195 328192;328193;328194;328195;328196;328197;328198 328195 7 STGSSQLTHK Unmodified 1044.52 0.51998696 4926 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 6.6066 3.269 2 0.008457 6407 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.264 47.671 65279000 28201000 37078000 0 0 0 0 0 0 0 0 0 0 0 0 0 49623 4926 44538 416196;416197 328199 328199 1 STGSTYGFLQPLTR Unmodified 1526.7729 0.77290718 2818 Q5VUA4 ZNF318 Zinc finger protein 318 yes yes 0 0 0 By matching By MS/MS By matching By matching 10 0 4 1 1 1 1 79.805 79.804 2 0.018132 92301 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 36.303 21.038 8083100 0 0 0 0 1163900 2299100 0 2117000 0 0 0 0 2503000 0 0 49624 2818 44539 416198;416199;416200;416201 328200 328200 1 STGTETGSNINVNSELNPSTGNR Unmodified 2348.084 0.084023579 2647 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 2 2 1 2 2 2 1 1 53.603 53.645 2;3 1.567E-101 60209 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 167.71 147.87 139350000 0 0 0 12530000 8173100 17468000 26525000 0 0 0 10571000 40654000 13194000 0 10231000 49625 2647 44540 416202;416203;416204;416205;416206;416207;416208;416209;416210;416211;416212;416213;416214 328201;328202;328203;328204;328205;328206;328207;328208;328209;328210;328211 328206 10 STGTFVVSQPLNYR Acetyl (Protein N-term) 1609.81 0.81002097 1561 P49189 ALDH9A1 4-trimethylaminobutyraldehyde dehydrogenase yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.878 81.939 2 1.0859E-100 94477 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 246.59 212.63 175450000 0 0 0 6311600 4068100 6633800 4997900 4687000 2769200 7312600 27889000 19331000 4369900 19594000 67490000 49626 1561 44541 416215;416216;416217;416218;416219;416220;416221;416222;416223;416224;416225;416226 328212;328213;328214;328215;328216;328217;328218;328219;328220;328221;328222;328223 328215 12 STGVFQDEELLFSHK Unmodified 1735.8417 0.84171503 2840;5195 Q641Q2;Q9Y4E1 FAM21A;FAM21C WASH complex subunit FAM21A;WASH complex subunit FAM21C no no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 81.849 80.841 3 0.0017278 101828 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.507 77.034 112950000 0 69077000 6120800 548300 0 0 0 0 0 0 6042700 0 2962900 4238100 23956000 49627 2840;5195 44542 416227;416228;416229;416230;416231;416232;416233 328224;328225;328226;328227 328224 3 STGYDPVK Unmodified 865.41815 0.41814765 4857 Q9UBT2 UBA2 SUMO-activating enzyme subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 20.589 20.887 2 0.016961 20405 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.429 48.868 105420000 0 0 0 0 0 5216800 3887500 1152200 0 5226800 17069000 20543000 0 14345000 37984000 49628 4857 44543 416234;416235;416236;416237;416238;416239;416240;416241 328228;328229;328230;328231;328232 328229 5 STGYMQQDLDVAK Unmodified 1454.6711 0.67114423 3745 Q96AY4 TTC28 Tetratricopeptide repeat protein 28 yes yes 0 0 0 By MS/MS 2 0 1 1 56.44 50.618 2 0.00013479 65413 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.445 60.574 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49629 3745 44544 416242 328233 328233 1 STHDHWK Unmodified 909.40931 0.4093143 2505 Q15181 PPA1 Inorganic pyrophosphatase yes yes 0 0 0 By MS/MS 2 0 1 1 5.5808 2.2033 2 9.1232E-15 5041 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 167.82 121.16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49630 2505 44545 416243 328234 328234 1 STHEFKPQSGAEIK Unmodified 1557.7787 0.77872084 354 O43683 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 24.136 23.88 2;3 0.011389 35124 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.658 64.355 60564000 5685500 0 0 0 3183500 3703100 3712100 3882300 2945800 5212400 6521300 3969600 7214700 5019100 9514300 49631 354 44546 416244;416245;416246;416247;416248;416249;416250;416251;416252;416253;416254;416255 328235;328236 328236 2 STHGLAILGPENPK Unmodified 1432.7674 0.76742787 2732 Q5JRX3 PITRM1 Presequence protease, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 63.786 57.219 2;3 2.1528E-23 77217 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 128.08 92.57 60147000 43513000 12377000 4256600 0 0 0 0 0 0 0 0 0 0 0 0 49632 2732 44547 416256;416257;416258;416259 328237;328238;328239;328240 328238 4 STHNEDQASCEVLTVK Unmodified 1816.8261 0.82614132 5002 Q9ULR3 PPM1H Protein phosphatase 1H yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 38.663 38.045 3 0.00011009 41115 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 56.851 43.751 136000000 0 46741000 0 4133100 0 6827300 5646800 7456300 0 6994400 10890000 16734000 11223000 8680600 10667000 49633 5002 44548 416260;416261;416262;416263;416264;416265;416266;416267;416268;416269;416270;416271 328241;328242;328243;328244;328245;328246;328247;328248;328249;328250 328248 9 STHQAAIVSK Unmodified 1040.5615 0.56145784 2117 Q05682 CALD1 Caldesmon yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7 3.87 3 5 1 1 1 1 1 1 1 1 9.6246 8.597 2 6.8927E-11 11841 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 175.65 118.06 402850000 171320000 152110000 65091000 0 0 0 0 660970 0 0 5126700 3433300 1160800 0 3942000 49634 2117 44549 416272;416273;416274;416275;416276;416277;416278;416279 328251;328252;328253;328254;328255;328256;328257;328258;328259 328251 9 STIFPLDGVVR Unmodified 1202.6659 0.66592292 395 O60318 MCM3AP Germinal-center associated nuclear protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 83.679 83.775 2 0.00042561 96980 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 85.731 63.645 54123000 0 0 0 0 2454600 4409500 3665900 7010100 0 6333300 3420000 4623100 6514400 5114800 10577000 49635 395 44550 416280;416281;416282;416283;416284;416285;416286;416287;416288;416289 328260;328261;328262;328263;328264;328265;328266;328267;328268 328264 9 STIGAYFLK Unmodified 998.54368 0.54368251 3467 Q8NI36 WDR36 WD repeat-containing protein 36 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 73.957 74.074 2 0.0093345 85390 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 67.032 53.384 62379000 0 0 0 0 3223200 4561600 4424600 6115300 5588200 4995000 5890100 8078100 6178000 5850000 7474500 49636 3467 44551 416290;416291;416292;416293;416294;416295;416296;416297;416298;416299;416300 328269;328270;328271;328272;328273;328274;328275;328276;328277;328278 328273 10 STIGGQIMYLTGMVDK 2 Oxidation (M) 1744.8376 0.83755763 1014 P15170 GSPT1 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A yes yes 0 2 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 80.484 79.437 2 0.00017438 92395 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 62.14 51.952 44477000 16085000 0 0 0 0 2782300 0 2443500 0 6895500 0 4707100 0 2492000 9071200 49637 1014 44552 416301;416302;416303;416304;416305;416306;416307 328279;328280;328281 328279 1409;1410 3 STIGGQIMYLTGMVDK Oxidation (M) 1728.8426 0.84264301 1014 P15170 GSPT1 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A yes yes 0 1 0 By MS/MS 2 0 1 1 91.648 83.518 2 0.00046022 108277 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.073 27.505 19170000 19170000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49638 1014 44552 416308 328282 328282 1409;1410 1 STIGGQIMYLTGMVDK Unmodified 1712.8477 0.84772838 1014 P15170 GSPT1 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A yes yes 0 0 0 By MS/MS 2 0 1 1 96.52 88.39 3 0.0073202 114195 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 39.91 4.4372 10611000 10611000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49639 1014 44552 416309 328283 328283 1 STIGVDGSVYK Unmodified 1124.5714 0.57135383 1702 P52789 HK2 Hexokinase-2 yes yes 0 0 0 By MS/MS 10 0 1 1 42.815 43.273 2 0.0074255 48160 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 54.066 39.909 9194400 0 0 0 0 0 0 0 0 0 0 9194400 0 0 0 0 49640 1702 44553 416310 328284 328284 1 STIGVEFATR Unmodified 1079.5611 0.56112349 2593 Q15907;P62491 RAB11B;RAB11A Ras-related protein Rab-11B;Ras-related protein Rab-11A yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.59 2.99 3 1 18 1 2 1 1 1 1 1 2 1 1 1 3 2 2 2 59.899 57.801 2 0.00082953 66268 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 119.07 75.26 379140000 39459000 149930000 19699000 11350000 16639000 25614000 19534000 20601000 0 33890000 42421000 0 0 0 0 49641 2593 44554 416311;416312;416313;416314;416315;416316;416317;416318;416319;416320;416321;416322;416323;416324;416325;416326;416327;416328;416329;416330;416331;416332 328285;328286;328287;328288;328289;328290;328291;328292;328293;328294;328295;328296;328297;328298;328299;328300;328301;328302;328303;328304;328305;328306;328307;328308;328309;328310;328311;328312;328313;328314;328315 328290 31 STIGVEFATRSIQVDGK Unmodified 1806.9476 0.94757708 2593 Q15907;P62491 RAB11B;RAB11A Ras-related protein Rab-11B;Ras-related protein Rab-11A yes no 0 0 1 By MS/MS 2.5 0.5 1 1 2 78.618 72.63 3 1.0822E-26 93941 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 125.5 120.62 133750000 133750000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49642 2593 44555 416333;416334 328316;328317 328317 1 STIGVMVTASHNPEEDNGVK Unmodified 2083.9844 0.98443288 653 O95394 PGM3 Phosphoacetylglucosamine mutase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 62.026 56.035 3 5.2415E-10 72653 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.668 84.766 56148000 20220000 28659000 7269600 0 0 0 0 0 0 0 0 0 0 0 0 49643 653 44556 416335;416336;416337 328318;328319 328318 2 STIGVMVTASHNPEEDNGVK Oxidation (M) 2099.9793 0.9793475 653 O95394 PGM3 Phosphoacetylglucosamine mutase yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 50.623 44.665 3 2.8839E-05 56470 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 60.034 50.285 15105000 8424300 0 6680800 0 0 0 0 0 0 0 0 0 0 0 0 49644 653 44556 416338;416339 328320;328321 328321 796 2 STIIGESISR Unmodified 1061.5717 0.57168818 1733 P54136 RARS Arginine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 46.807 47.063 2 0.009388 51739 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 57.859 22.421 387250000 0 0 0 18553000 0 41042000 0 25859000 0 49624000 51225000 56138000 38096000 32880000 73833000 49645 1733 44557 416340;416341;416342;416343;416344;416345;416346;416347;416348 328322;328323;328324;328325;328326;328327;328328;328329 328326 5 STILQQQFNR Unmodified 1233.6466 0.64658446 5201 Q9Y4G6 TLN2 Talin-2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 52.279 52.72 2 0.02102 58988 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 75.213 47.909 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49646 5201 44558 416349;416350 328330;328331 328331 2 STIPVQQGLPTSK Unmodified 1354.7456 0.7456298 3086 Q7Z3T8 ZFYVE16 Zinc finger FYVE domain-containing protein 16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 52.537 52.112 2 0.0019142 57964 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.116 56.652 100520000 0 29064000 0 0 0 12945000 0 4444000 0 9296500 8537600 14598000 0 6724000 14907000 49647 3086 44559 416351;416352;416353;416354;416355;416356;416357;416358 328332;328333;328334;328335;328336;328337 328335 5 STIQNLESSSNQALNCK Unmodified 1892.8898 0.88980421 1036 P16383 GCFC2 GC-rich sequence DNA-binding factor 2 yes yes 0 0 0 By MS/MS 2 0 1 1 61.422 55.547 2 4.9329E-46 71317 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 171.32 151.58 21234000 0 21234000 0 0 0 0 0 0 0 0 0 0 0 0 0 49648 1036 44560 416359 328338 328338 1 STIQNLQSFDPFADATK Acetyl (Protein N-term) 1923.9214 0.92142191 427 O60739 EIF1B Eukaryotic translation initiation factor 1b yes yes 1 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 96.651 94.342 2 2.3111E-70 114723 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 206.18 191.31 36341000 0 33150000 0 0 0 0 0 0 0 0 0 0 0 0 3191700 49649 427 44561 416360;416361 328339;328340 328339 2 STKPGAAPTEHK Unmodified 1222.6306 0.63060004 3308 Q8N163 CCAR2 Cell cycle and apoptosis regulator protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 6.1363 3.1771 3 0.0022507 5229 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 71.176 28.432 696270000 502600000 58373000 135300000 0 0 0 0 0 0 0 0 0 0 0 0 49650 3308 44562 416362;416363;416364 328341 328341 1 STLAALIAAQR Unmodified 1113.6506 0.6506072 4516 Q9HCJ3 RAVER2 Ribonucleoprotein PTB-binding 2 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.911 75.973 2 1.4051E-15 87746 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 149.65 119.4 140210000 0 0 0 4574800 6188300 13183000 10430000 12907000 7771600 13761000 13991000 20536000 9463300 9815900 17588000 49651 4516 44563 416365;416366;416367;416368;416369;416370;416371;416372;416373;416374;416375;416376 328342;328343;328344;328345;328346;328347;328348 328344 4 STLADYSAQK Unmodified 1082.5244 0.52440364 4976 Q9UKV3 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 27.856 28.018 2 0.0089019 29708 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 58.916 34.065 57066000 0 0 0 0 5424300 6688200 6617100 0 5134600 7454400 0 9942800 9725100 6079800 0 49652 4976 44564 416377;416378;416379;416380;416381;416382;416383;416384 328349;328350;328351;328352;328353 328353 5 STLAESSDHVEK Unmodified 1301.6099 0.60992418 2959 Q6PJG6 BRAT1 BRCA1-associated ATM activator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 19 2 2 2 2 1 2 2 1 1 2 1 1 14.707 14.837 2;3 0.00033735 14125 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 91.584 69.498 138500000 0 0 0 9142400 5476500 18113000 11557000 8093400 6443800 15951000 11033000 12824000 20554000 10335000 8980800 49653 2959 44565 416385;416386;416387;416388;416389;416390;416391;416392;416393;416394;416395;416396;416397;416398;416399;416400;416401;416402;416403 328354;328355;328356;328357;328358;328359;328360;328361;328362 328359 8 STLDIVLANK Unmodified 1072.6128 0.61282471 1171 P23921 RRM1 Ribonucleoside-diphosphate reductase large subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.39 3.71 1 3 2 12 3 2 1 1 1 1 1 1 1 1 1 1 1 1 1 73.297 72.312 2 1.5432E-06 88200 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 150.88 131.39 4565100000 252310000 2895700000 131700000 45882000 53350000 127660000 98188000 63797000 73376000 135120000 141910000 151490000 81399000 102950000 210260000 49654 1171 44566 416404;416405;416406;416407;416408;416409;416410;416411;416412;416413;416414;416415;416416;416417;416418;416419;416420;416421 328363;328364;328365;328366;328367;328368;328369;328370;328371;328372;328373;328374;328375;328376;328377;328378;328379;328380;328381;328382;328383;328384;328385;328386;328387 328368 25 STLDQVK Unmodified 789.42323 0.42323303 3936 Q96NC0 ZMAT2 Zinc finger matrin-type protein 2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 15.648 15.783 2 0.04604 15181 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 66.087 20.205 16685000 0 0 0 0 3241100 0 0 0 0 0 0 13444000 0 0 0 49655 3936 44567 416422;416423 328388 328388 1 STLDRLQSER Unmodified 1203.6208 0.62076364 96 CON__Q5XKE5;Q5XKE5 KRT79 Keratin, type II cytoskeletal 79 yes no 0 0 1 By MS/MS 10 0 1 1 28.583 28.303 3 0.016569 30685 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 44.847 26.102 + 32050000 0 0 0 32050000 0 0 0 0 0 0 0 0 0 0 0 49656 96 44568 416424 328389 328389 1 STLDTDYQMTK Oxidation (M) 1317.5758 0.57584686 736 P00813 ADA Adenosine deaminase yes yes 0 1 0 By MS/MS 2 0 1 1 30.792 26.36 2 0.0081273 34506 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.334 28.081 15082000 0 15082000 0 0 0 0 0 0 0 0 0 0 0 0 0 49657 736 44569 416425 328390 328390 898 1 STLDTDYQMTK Unmodified 1301.5809 0.58093224 736 P00813 ADA Adenosine deaminase yes yes 0 0 0 By MS/MS 2 0 1 1 44.7 39.481 2 0.0047183 51181 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.148 74.609 46301000 0 46301000 0 0 0 0 0 0 0 0 0 0 0 0 0 49658 736 44569 416426 328391 328391 1 STLEAETR Unmodified 905.44543 0.44542503 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 13.56 13.682 2 0.0067631 13055 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 121.99 71.357 573070000 0 0 0 128000000 25480000 23108000 28054000 99104000 20698000 48762000 53360000 79368000 67135000 0 0 49659 1029 44570 416427;416428;416429;416430;416431;416432;416433;416434;416435;416436 328392;328393;328394;328395;328396;328397;328398;328399;328400 328396 9 STLEAETRVK Unmodified 1132.6088 0.60880197 1029 P15924 DSP Desmoplakin yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 25.214 21.462 2 5.5102E-05 26897 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 136.57 87.772 109990000 0 92351000 17642000 0 0 0 0 0 0 0 0 0 0 0 0 49660 1029 44571 416437;416438;416439 328401;328402;328403 328402 1 STLENQNWR Unmodified 1146.5418 0.54178503 2467 Q15003 NCAPH Condensin complex subunit 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 33.816 33.94 2 0.0034363 36110 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 104.21 83.584 67497000 0 0 0 5527600 4935100 0 6337800 5508200 5215600 0 16739000 0 7707100 0 15526000 49661 2467 44572 416440;416441;416442;416443;416444;416445;416446;416447 328404;328405;328406 328404 3 STLEPVEK Unmodified 901.47566 0.47566253 908;1047 P0DMV9;P0DMV8;P17066;P48741 HSPA1B;HSPA1A;HSPA6;HSPA7 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.941 23.147 2 0.005648 24774 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 106.04 58.193 3464100000 0 0 0 136980000 115130000 137350000 146590000 118660000 88173000 233520000 405140000 495730000 291640000 409100000 886140000 49662 908;1047 44573 416448;416449;416450;416451;416452;416453;416454;416455;416456;416457;416458;416459 328407;328408;328409;328410;328411;328412;328413;328414;328415;328416;328417;328418;328419;328420;328421;328422 328421 15 STLFVDVLENMR Oxidation (M) 1438.7126 0.71261511 2985 Q6V0I7 FAT4 Protocadherin Fat 4 yes yes 0 1 0 By MS/MS 2 0 1 1 84.837 80.094 2 0.010524 99595 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 61.65 26.205 25721000 0 25721000 0 0 0 0 0 0 0 0 0 0 0 0 0 49663 2985 44574 416460 328423 328423 4601 1 STLFWGAR Unmodified 936.48175 0.48175096 3954 Q96QA5 GSDMA Gasdermin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 67.148 67.164 2 0.0060548 78191 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 104.11 92.471 159370000 0 0 0 55268000 7513900 8998800 9178000 13290000 8020100 15988000 0 22105000 11243000 7767400 0 49664 3954 44575 416461;416462;416463;416464;416465;416466;416467;416468;416469;416470 328424;328425;328426;328427;328428 328427 5 STLGDLDTVAGLEK Unmodified 1417.73 0.73003931 2817 Q5VU43 PDE4DIP Myomegalin yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 77.776 77.383 2 0.012885 89283 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 38.238 28.805 11733000 0 0 0 4891500 6841100 0 0 0 0 0 0 0 0 0 0 49665 2817 44576 416471;416472 328429;328430 328430 2 STLINTLFK Unmodified 1035.5964 0.59644637 4898 Q9UHD8 SEPT9 Septin-9 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.85 81.913 2 0.035371 94309 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.129 25.99 102740000 0 0 0 1861800 3257500 7451000 5623500 8977500 5120400 11823000 13260000 15630000 4900200 6295800 18539000 49666 4898 44577 416473;416474;416475;416476;416477;416478;416479;416480;416481;416482;416483;416484 328431 328431 1 STLIPILHQK Unmodified 1148.6917 0.69174374 2647 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 1 2 2 2 2 2 2 2 2 2 2 64.98 65.094 2;3 0.015635 74479 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 44.863 41.256 246370000 0 0 0 11491000 2263800 24620000 17938000 15500000 14986000 24624000 22953000 23474000 22858000 21871000 43792000 49667 2647 44578 416485;416486;416487;416488;416489;416490;416491;416492;416493;416494;416495;416496;416497;416498;416499;416500;416501;416502;416503;416504;416505;416506;416507 328432;328433;328434;328435;328436 328433 3 STLKPQPAPQAGPIPVAPIGTLK Unmodified 2280.3206 0.32055286 3706 Q93052 LPP Lipoma-preferred partner yes yes 0 0 1 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 78.87 79.021 3 3.3158E-05 91445 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 29.492 28.986 46386000 0 0 0 0 0 4019700 0 0 3042800 0 6428600 7733900 0 8172300 16989000 49668 3706 44579 416508;416509;416510;416511;416512;416513 328437;328438;328439;328440 328440 4 STLLFGQR Unmodified 920.50797 0.50796571 1328 P33176 KIF5B Kinesin-1 heavy chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 54.841 54.973 2 0.0058676 62030 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 105.2 84.575 660220000 0 0 0 41746000 35155000 58201000 41337000 46432000 40752000 54149000 75555000 71451000 59664000 47042000 88732000 49669 1328 44580 416514;416515;416516;416517;416518;416519;416520;416521;416522;416523;416524;416525 328441;328442;328443;328444;328445;328446;328447;328448;328449;328450;328451 328445 10 STLLFSQGK Unmodified 979.53385 0.53384611 5245 Q9Y5Q9 GTF3C3 General transcription factor 3C polypeptide 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 51.299 51.269 2 0.0051747 57859 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 81.296 51.111 75108000 0 0 0 17756000 0 0 14736000 17373000 0 0 0 0 25244000 0 0 49670 5245 44581 416526;416527;416528;416529 328452 328452 1 STLLLLLTGK Unmodified 1057.6747 0.67469669 3421 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 91.029 91.149 2 0.011537 105540 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.066 42.698 10667000 0 0 0 0 0 1380300 0 1261100 0 2582500 0 1438100 0 0 4005300 49671 3421 44582 416530;416531;416532;416533;416534 328453;328454;328455 328455 3 STLLLYQSPTTGLFPTK Unmodified 1866.0139 0.013865735 3711 Q93100 PHKB Phosphorylase b kinase regulatory subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 89.219 88.528 2 7.1929E-10 103091 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 88.187 74.029 26920000 8593700 0 0 0 0 1771400 0 2004200 604460 3199800 2041700 2040600 725580 1642200 4296400 49672 3711 44583 416535;416536;416537;416538;416539;416540;416541;416542;416543;416544 328456;328457;328458;328459;328460;328461;328462;328463 328457 8 STLLQVLQHQR Unmodified 1321.7466 0.74663285 692 O95801 TTC4 Tetratricopeptide repeat protein 4 yes yes 0 0 0 By MS/MS 10 0 1 1 70.875 71.31 3 0.01923 81437 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.714 14.965 6322500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6322500 49673 692 44584 416545 328464 328464 1 STLMDTLFNTK Oxidation (M) 1285.6224 0.62240312 2373;4663 Q14141;Q9NVA2 SEPT6;SEPT11 Septin-6;Septin-11 no no 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 7.33 3.77 3 6 1 1 1 1 2 1 1 1 58.43 57.293 2 0.0050048 89866 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.067 52.546 53011000 11369000 0 1982000 0 0 0 0 4194900 0 0 11115000 3971600 0 4946500 15433000 49674 2373;4663 44585 416546;416547;416548;416549;416550;416551;416552;416553;416554 328465;328466;328467;328468;328469 328467 3859 5 STLMDTLFNTK Unmodified 1269.6275 0.6274885 2373;4663 Q14141;Q9NVA2 SEPT6;SEPT11 Septin-6;Septin-11 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.4 3.77 2 1 2 1 1 1 1 1 86.827 84.148 2 4.3848E-07 106597 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 125.57 115.34 72858000 57643000 1989900 2309700 0 0 0 0 0 0 0 4648000 0 0 0 6266900 49675 2373;4663 44585 416555;416556;416557;416558;416559 328470;328471;328472;328473;328474;328475 328473 4 STLMNTLFNTTFETEEASHHEACVR Unmodified 2924.3069 0.306906 3634 Q92599 SEPT8 Septin-8 yes yes 0 0 0 By MS/MS 2 0 1 1 85.386 77.255 4 0.012365 100750 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 25.803 23.33 35727000 35727000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49676 3634 44586 416560 328476 328476 1 STLNEIYFGK Unmodified 1170.5921 0.59208927 1525 P47756 CAPZB F-actin-capping protein subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.743 67.825 2 0.0025706 77970 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 82.279 72.368 745440000 0 0 0 57268000 46280000 52951000 46023000 55548000 30417000 67275000 79425000 87467000 67683000 53291000 101810000 49677 1525 44587 416561;416562;416563;416564;416565;416566;416567;416568;416569;416570;416571;416572 328477;328478;328479;328480;328481;328482;328483;328484;328485;328486;328487;328488;328489;328490 328483 14 STLPDADRER Unmodified 1158.5629 0.56291441 356 O43707 ACTN4 Alpha-actinin-4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 1 1 2 1 1 1 2 16.853 17.081 2;3 0.00033362 16325 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 145.72 124.28 958750000 0 0 0 41474000 24794000 67152000 28666000 21269000 18163000 39695000 120080000 144120000 44924000 89763000 318660000 49678 356 44588 416573;416574;416575;416576;416577;416578;416579;416580;416581;416582;416583;416584;416585;416586 328491;328492;328493;328494;328495;328496;328497;328498;328499;328500;328501;328502;328503;328504 328497 6 STLPDADREREAILAIHK Unmodified 2034.0858 0.0858019 356 O43707 ACTN4 Alpha-actinin-4 yes yes 0 0 2 By MS/MS 2 0 1 1 72.455 64.217 5 0.0058345 85216 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 36.112 29.792 44746000 44746000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49679 356 44589 416587 328505 328505 0 STLPGSTTSNK Unmodified 1091.5459 0.54586736 5055 Q9UPQ9 TNRC6B Trinucleotide repeat-containing gene 6B protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 14.444 14.65 2 0.0037353 14335 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 63.184 29.095 36818000 0 0 0 0 0 7277400 0 0 4684600 0 0 0 5625800 7851500 11379000 49680 5055 44590 416588;416589;416590;416591;416592 328506;328507;328508 328508 3 STLQQLLQLPQGEEEIPEQIANTETTEDVK Unmodified 3380.6835 0.68348964 2476 Q15021 NCAPD2 Condensin complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 97.285 92.617 3 1.4305E-11 114415 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 57.496 52.828 73355000 34006000 33815000 5533500 0 0 0 0 0 0 0 0 0 0 0 0 49681 2476 44591 416593;416594;416595;416596 328509;328510;328511 328509 3 STLQTMESDIYTEVR Oxidation (M) 1787.8247 0.82474434 2135 Q07065 CKAP4 Cytoskeleton-associated protein 4 yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 63.924 63.644 2 0.00092027 73729 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 51.774 37.616 7206200 0 0 0 3703300 0 0 3502900 0 0 0 0 0 0 0 0 49682 2135 44592 416597;416598 328512;328513 328513 3437 2 STLRDQINSDHR Unmodified 1440.707 0.70695288 2202 Q12874 SF3A3 Splicing factor 3A subunit 3 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 19.155 19.321 3 6.8822E-05 18240 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.101 66.055 871170000 0 0 0 41290000 39849000 64396000 61705000 59115000 61718000 103550000 0 109260000 85780000 77405000 167100000 49683 2202 44593 416599;416600;416601;416602;416603;416604;416605;416606;416607;416608;416609 328514;328515;328516;328517;328518;328519;328520 328516 5 STLSNQLLGRK Unmodified 1215.6935 0.69353465 525 O75616 ERAL1 GTPase Era, mitochondrial yes yes 0 0 1 By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 42.352 42.476 3 0.047453 46228 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 26.012 12.612 27695000 0 0 0 1216800 1086800 2270800 1359900 2171600 1815700 2811700 3947500 0 3627600 2777400 4609700 49684 525 44594 416610;416611;416612;416613;416614;416615;416616;416617;416618;416619;416620 328521 328521 1 STLSQTVPSK Unmodified 1046.5608 0.56078914 4577 Q9NQW6 ANLN Actin-binding protein anillin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 25.727 25.927 2 0.015816 28014 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 95.608 55.51 155030000 0 0 0 7478300 12033000 12760000 15066000 9346300 10085000 17370000 14763000 16858000 10137000 9360000 19774000 49685 4577 44595 416621;416622;416623;416624;416625;416626;416627;416628;416629;416630;416631;416632 328522;328523;328524;328525 328525 3 STLSTYLEDCK Unmodified 1315.5966 0.5965823 4842 Q9UBI1 COMMD3 COMM domain-containing protein 3 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 67.039 62.253 2 0.012974 76009 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 64.297 48.332 164890000 0 161040000 3851700 0 0 0 0 0 0 0 0 0 0 0 0 49686 4842 44596 416633;416634;416635 328526;328527;328528 328527 3 STLTDSLVCK Unmodified 1122.5591 0.55907458 980 P13639 EEF2 Elongation factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.05 3.89 2 3 2 12 3 3 1 1 1 1 1 1 1 1 1 1 1 1 1 56.982 55.924 2 0.00054222 56028 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 133.23 111.15 11959000000 400630000 9747700000 136730000 72411000 43002000 57533000 52514000 37526000 42661000 74036000 209910000 200750000 79396000 239380000 565080000 49687 980 44597 416636;416637;416638;416639;416640;416641;416642;416643;416644;416645;416646;416647;416648;416649;416650;416651;416652;416653;416654 328529;328530;328531;328532;328533;328534;328535;328536;328537;328538;328539;328540;328541;328542;328543;328544;328545;328546;328547;328548;328549;328550;328551;328552;328553;328554;328555;328556;328557;328558;328559;328560;328561;328562 328557 34 STLTPTQRESIPAK Unmodified 1527.8257 0.82567103 488 O75376 NCOR1 Nuclear receptor corepressor 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 38.89 34.64 3 0.00073938 43579 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 70.438 48.88 59074000 0 34481000 24593000 0 0 0 0 0 0 0 0 0 0 0 0 49688 488 44598 416655;416656 328563 328563 1 STLVCPECAK Unmodified 1163.5315 0.53147962 5198;2233 Q9Y4E8;Q13107 USP15;USP4 Ubiquitin carboxyl-terminal hydrolase 15;Ubiquitin carboxyl-terminal hydrolase 4 no no 0 0 0 By MS/MS 2 0 1 1 34.673 29.917 2 0.017068 39590 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.692 57.334 24891000 0 24891000 0 0 0 0 0 0 0 0 0 0 0 0 0 49689 5198;2233 44599 416657 328564 328564 1 STLYVSPHPDAFPSLR Acetyl (Protein N-term) 1827.9155 0.91554867 1210 P26640 VARS Valine--tRNA ligase yes yes 1 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 1 1 2 2 1 2 2 2 2 2 83.925 83.984 2;3 1.0148E-113 97245 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 225.13 201.9 548130000 0 0 0 11402000 25596000 48237000 16351000 34778000 28289000 48210000 64224000 74297000 30489000 46121000 120140000 49690 1210 44600 416658;416659;416660;416661;416662;416663;416664;416665;416666;416667;416668;416669;416670;416671;416672;416673;416674;416675;416676;416677;416678 328565;328566;328567;328568;328569;328570;328571;328572;328573;328574;328575;328576;328577 328565 13 STMMTQEQIQK Oxidation (M) 1339.6112 0.61118651 5014 Q9UM54 MYO6 Unconventional myosin-VI yes yes 0 1 0 By MS/MS 2 0 1 1 23.289 19.264 2 0.010804 25464 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.711 41.283 3683800 0 3683800 0 0 0 0 0 0 0 0 0 0 0 0 0 49691 5014 44601 416679 328578 328578 6355 1 STMQELNSR Oxidation (M) 1080.487 0.48697227 1354 P35527;CON__P35527 KRT9 Keratin, type I cytoskeletal 9 yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 97 7 6 11 8 5 11 8 7 8 8 9 9 14.968 15.156 2 1.563E-06 7702 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 157.33 123.24 + 24555000000 0 0 0 2837000000 1812300000 1211700000 1190400000 6195700000 886680000 1719500000 2363300000 2609300000 2418500000 779030000 531570000 49692 1354 44602 416680;416681;416682;416683;416684;416685;416686;416687;416688;416689;416690;416691;416692;416693;416694;416695;416696;416697;416698;416699;416700;416701;416702;416703;416704;416705;416706;416707;416708;416709;416710;416711;416712;416713;416714;416715;416716;416717;416718;416719;416720;416721;416722;416723;416724;416725;416726;416727;416728;416729;416730;416731;416732;416733;416734;416735;416736;416737;416738;416739;416740;416741;416742;416743;416744;416745;416746;416747;416748;416749;416750;416751;416752;416753;416754;416755;416756;416757;416758;416759;416760;416761;416762;416763;416764;416765;416766;416767;416768;416769;416770;416771;416772;416773;416774;416775;416776 328579;328580;328581;328582;328583;328584;328585;328586;328587;328588;328589;328590;328591;328592;328593;328594;328595;328596;328597;328598;328599;328600;328601;328602;328603;328604;328605;328606;328607;328608;328609;328610;328611;328612;328613;328614;328615;328616;328617;328618;328619;328620;328621;328622;328623;328624;328625;328626;328627;328628;328629;328630;328631;328632;328633;328634;328635;328636;328637;328638;328639;328640;328641;328642;328643;328644;328645;328646;328647;328648;328649;328650;328651;328652;328653;328654;328655;328656;328657;328658;328659;328660;328661;328662;328663;328664;328665;328666;328667;328668;328669;328670;328671;328672;328673;328674;328675;328676;328677;328678;328679;328680;328681;328682;328683;328684;328685;328686;328687;328688;328689;328690;328691;328692;328693;328694;328695;328696;328697;328698;328699;328700;328701;328702;328703;328704;328705;328706;328707;328708;328709;328710;328711;328712;328713;328714;328715;328716;328717;328718;328719;328720;328721;328722;328723;328724;328725;328726;328727;328728;328729;328730;328731;328732;328733;328734;328735;328736;328737;328738;328739;328740;328741;328742;328743;328744;328745;328746;328747;328748;328749;328750;328751;328752;328753;328754;328755;328756;328757;328758;328759;328760;328761;328762;328763;328764;328765;328766;328767 328662 2063 187 STMQELNSR Unmodified 1064.4921 0.49205765 1354 P35527;CON__P35527 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.47 2 1 14 1 1 2 1 1 1 1 2 1 1 1 1 1 22.168 22.048 2 0.00085161 23154 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 143.89 115.67 + 55360000000 0 30030000 0 5636700000 3440000000 3831100000 3073200000 11214000000 2589000000 4632300000 5426200000 6079700000 5039200000 2189400000 2178800000 49693 1354 44602 416777;416778;416779;416780;416781;416782;416783;416784;416785;416786;416787;416788;416789;416790;416791 328768;328769;328770;328771;328772;328773;328774;328775;328776;328777;328778;328779;328780;328781;328782;328783;328784;328785;328786;328787;328788;328789;328790;328791;328792;328793;328794;328795;328796;328797;328798 328793 31 STMQELNSRLASYLDK Oxidation (M) 1870.9095 0.90947702 1354 P35527;CON__P35527 KRT9 Keratin, type I cytoskeletal 9 yes no 0 1 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 7.71 3.61 2 5 2 1 1 1 1 1 74.002 71.829 3 0.00025794 82914 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 58.671 49.255 + 76209000 40707000 0 0 0 0 6761400 0 2561200 8145300 0 0 12535000 0 0 5499600 49694 1354 44603 416792;416793;416794;416795;416796;416797;416798 328799;328800;328801;328802 328802 2063 3 STMVDPAINLFFLK Oxidation (M) 1610.8378 0.83781563 2470 Q15007 WTAP Pre-mRNA-splicing regulator WTAP yes yes 0 1 0 By MS/MS 10 0 1 1 95.487 95.634 2 0.0013257 110902 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.79 43.468 2884700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2884700 49695 2470 44604 416799 328803;328804 328804 4068 2 STNDADVPQGVIRVQAPHLSK Unmodified 2231.1658 0.16584314 3319 Q8N392 ARHGAP18 Rho GTPase-activating protein 18 yes yes 0 0 1 By MS/MS 2 0 1 1 74.871 66.741 4 0.0010491 88151 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.559 41.271 51232000 51232000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49696 3319 44605 416800 328805 328805 1 STNDSVLAVGFNPR Unmodified 1475.7369 0.73685603 2665 Q32P44 EML3 Echinoderm microtubule-associated protein-like 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 72.61 72.627 2 0.0003697 82963 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 92.611 81.46 42975000 0 0 0 5722300 3463400 4957400 6200400 4076000 0 0 6093800 0 0 4723400 7738300 49697 2665 44606 416801;416802;416803;416804;416805;416806;416807;416808;416809;416810 328806;328807;328808;328809;328810;328811 328808 6 STNEAMEWMNNK 2 Oxidation (M) 1485.5864 0.58642832 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 2 0 By MS/MS 2.4 0.49 3 2 5 28.579 24.259 2 4.2392E-14 31210 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.36 131.38 126140000 0 126140000 0 0 0 0 0 0 0 0 0 0 0 0 0 49698 1337 44607 416811;416812;416813;416814;416815 328812;328813;328814;328815 328812 2021;2022 4 STNEAMEWMNNK Oxidation (M) 1469.5915 0.5915137 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 1 0 By MS/MS By matching By MS/MS 4.25 3.34 4 2 2 6 1 1 45.42 41.666 2 6.3418E-65 48238 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 215.93 211.47 661120000 0 650660000 0 0 0 0 0 0 0 0 3822100 0 0 0 6642900 49699 1337 44607 416816;416817;416818;416819;416820;416821;416822;416823 328816;328817;328818;328819;328820;328821 328816 2021;2022 5 STNEAMEWMNNK Unmodified 1453.5966 0.59659908 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 6.57 3.96 3 4 1 1 1 1 1 1 1 60.136 57.821 2 5.8689E-169 74659 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 254.42 252.39 770060000 20642000 665560000 2501300 0 0 0 0 0 0 0 12015000 10372000 0 8729100 50244000 49700 1337 44607 416824;416825;416826;416827;416828;416829;416830 328822;328823;328824;328825;328826;328827 328823 6 STNENANTPAAR Acetyl (Protein N-term) 1286.5851 0.58510641 1682 P52292 KPNA2 Importin subunit alpha-1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.76 16.939 2 7.2027E-51 17430 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 204.34 122.79 482640000 0 0 0 19147000 24744000 37379000 35979000 27690000 26978000 32661000 48222000 73458000 50381000 41462000 64542000 49701 1682 44608 416831;416832;416833;416834;416835;416836;416837;416838;416839;416840;416841;416842 328828;328829;328830;328831;328832;328833;328834;328835;328836;328837;328838;328839 328828 9 STNGDTFLGGEDFDQALLR Unmodified 2054.9545 0.95451296 1399 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 6.17 3.85 2 1 3 3 1 1 1 91.421 87.076 2;3 3.2171E-102 108198 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 196.33 180.79 105700000 0 105700000 0 0 0 0 0 0 0 0 0 0 0 0 0 49702 1399 44609 416843;416844;416845;416846;416847;416848 328840;328841;328842;328843;328844;328845 328841 5 STNILDNMGK Oxidation (M) 1107.523 0.52302343 535 O75717 WDHD1 WD repeat and HMG-box DNA-binding protein 1 yes yes 0 1 0 By MS/MS By matching By MS/MS 7.33 3.77 1 2 1 1 1 28.698 27.676 2 0.012928 29379 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.706 22.132 23880000 0 7796700 0 0 0 0 0 0 0 0 0 9675800 0 0 6407900 49703 535 44610 416849;416850;416851 328846;328847 328847 701 2 STNLDASENTGNK Unmodified 1349.6059 0.60590143 3601 Q8WYP5 AHCTF1 Protein ELYS yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 13.002 13.199 2 0.0052383 11827 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 62.466 57.683 26234000 0 0 0 0 0 2586800 2784500 2609700 2841600 3695400 3333900 2593700 3979700 1809000 0 49704 3601 44611 416852;416853;416854;416855;416856;416857;416858;416859;416860 328848 328848 1 STNPGISIGDVAK Unmodified 1257.6565 0.65648044 274 O15347 HMGB3 High mobility group protein B3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.65 3.68 2 1 2 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 64.106 63.619 2 2.0353E-07 64273 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 133.07 102.81 3376800000 36864000 2755800000 0 37682000 36905000 38389000 32580000 30063000 26187000 35434000 84404000 68009000 31322000 45848000 117340000 49705 274 44612 416861;416862;416863;416864;416865;416866;416867;416868;416869;416870;416871;416872;416873;416874;416875;416876;416877 328849;328850;328851;328852;328853;328854;328855;328856;328857;328858;328859;328860;328861;328862;328863;328864 328853 14 STNQQTATDVSTSSNIEESVNHMDGESLK Unmodified 3108.3789 0.37894455 2376 Q14149 MORC3 MORC family CW-type zinc finger protein 3 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 72.292 67.257 3 5.9106E-121 85297 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 151.65 141.13 24252000 0 24252000 0 0 0 0 0 0 0 0 0 0 0 0 0 49706 2376 44613 416878;416879 328865 328865 1 STNSHQSSTENELK Unmodified 1560.7016 0.70159273 2482 Q15032 R3HDM1 R3H domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 7.5954 7.6834 3 0.0010366 6146 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 56.569 48.465 29805000 0 0 0 1530100 2110800 2884300 3168600 2013800 2381500 3075100 0 6285900 2972700 3381800 0 49707 2482 44614 416880;416881;416882;416883;416884;416885;416886;416887;416888;416889 328866;328867;328868 328868 2 STNSRFENYGDK Unmodified 1416.627 0.62697123 4162 Q9BUJ2 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 4 24 1 1 2 2 2 2 2 2 2 2 2 2 2 2 2 20.066 19.708 2;3 0.0025993 20143 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 59.227 46.601 842280000 372170000 10795000 62943000 24444000 19097000 26610000 34679000 28991000 26976000 38687000 46741000 37745000 35142000 28052000 49207000 49708 4162 44615 416890;416891;416892;416893;416894;416895;416896;416897;416898;416899;416900;416901;416902;416903;416904;416905;416906;416907;416908;416909;416910;416911;416912;416913;416914;416915;416916;416917 328869;328870;328871;328872;328873;328874;328875;328876;328877;328878;328879;328880;328881;328882;328883 328881 5 STNSVFGGLESMIK Unmodified 1468.7232 0.7231798 392 O60293 ZFC3H1 Zinc finger C3H1 domain-containing protein yes yes 0 0 0 By MS/MS 2 0 1 1 93.936 89.04 2 0.027084 110542 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 43.991 31.755 15685000 0 15685000 0 0 0 0 0 0 0 0 0 0 0 0 0 49709 392 44616 416918 328884 328884 1 STNTSQTGLVGTK Unmodified 1292.6572 0.65720872 3964 Q96R06 SPAG5 Sperm-associated antigen 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.744 21.949 2 1.5445E-20 22330 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 189.58 174.04 182240000 0 0 0 8720600 9156800 15252000 17333000 10039000 12091000 13049000 20765000 20492000 14562000 14695000 26079000 49710 3964 44617 416919;416920;416921;416922;416923;416924;416925;416926;416927;416928;416929;416930 328885;328886;328887;328888;328889;328890;328891;328892;328893;328894;328895 328893 11 STNVIVDSGGFDELGGLLK Unmodified 1919.984 0.98402217 2300 Q13492 PICALM Phosphatidylinositol-binding clathrin assembly protein yes yes 0 0 0 By MS/MS 2 0 1 1 96.646 91.824 2 4.3E-08 113794 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.136 57.49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49711 2300 44618 416931 328896 328896 1 STNVTVAAARGIK Unmodified 1286.7306 0.73064844 2721 Q5BKZ1 ZNF326 DBIRD complex subunit ZNF326 yes yes 0 0 1 By MS/MS 2 0 1 1 42.652 35.917 3 0.039197 49463 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 26.13 14.597 6608300 6608300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49712 2721 44619 416932 328897 328897 1 STNVVYQAHHVSR Unmodified 1496.7484 0.74842377 642 O95340 PAPSS2 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 20.523 20.292 3 0.00038832 19204 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.01 68.285 299270000 43823000 0 0 12625000 10870000 26509000 12642000 14013000 16318000 25674000 24714000 38777000 18716000 19847000 34740000 49713 642 44620 416933;416934;416935;416936;416937;416938;416939;416940;416941;416942;416943;416944;416945 328898;328899;328900;328901;328902;328903;328904;328905;328906;328907;328908;328909;328910 328901 11 STPAAVGAMEDK Unmodified 1175.5492 0.54923818 4880 Q9UGI8 TES Testin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 33.506 33.769 2 0.0053831 36949 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 54.471 37.003 121580000 0 0 0 8909000 0 0 4525400 5542900 4658400 9369800 20670000 18036000 7368400 11355000 31144000 49714 4880 44621 416946;416947;416948;416949;416950;416951;416952;416953;416954;416955 328911;328912;328913;328914;328915;328916;328917 328911 7 STPAEDDSRDSQVK Unmodified 1533.6907 0.6906937 4893 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 8.9824 9.1163 3 0.0097125 7512 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 37.654 34.024 263300000 0 0 0 14715000 14945000 13839000 15877000 9412500 7364800 11743000 58359000 57955000 26707000 14027000 18357000 49715 4893 44622 416956;416957;416958;416959;416960;416961;416962;416963;416964;416965;416966;416967 328918;328919;328920;328921;328922;328923;328924;328925;328926;328927;328928 328926 8 STPAITLESPDIK Unmodified 1370.7293 0.72931103 723 P00387 CYB5R3 NADH-cytochrome b5 reductase 3;NADH-cytochrome b5 reductase 3 membrane-bound form;NADH-cytochrome b5 reductase 3 soluble form yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.041 70.118 2 0.002909 80489 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 56.359 43.006 738930000 0 0 0 43234000 56560000 54973000 61124000 58121000 41350000 69553000 77355000 91080000 66488000 53743000 65347000 49716 723 44623 416968;416969;416970;416971;416972;416973;416974;416975;416976;416977;416978;416979 328929;328930;328931;328932;328933;328934;328935;328936;328937;328938 328929 10 STPASYHADINLLYWSDEEAVVDFK Unmodified 2869.3447 0.34465494 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 0 0 By MS/MS 2 0 1 1 97.304 89.173 3 9.2031E-13 115161 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.758 73.462 17367000 17367000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49717 1201 44624 416980 328939 328939 1 STPDPPLGGTPR Acetyl (Protein N-term) 1235.6146 0.61461563 1656 P51532 SMARCA4 Transcription activator BRG1 yes yes 1 0 0 By MS/MS By MS/MS 10 0 2 1 1 53.586 53.831 2 0.039006 60981 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 43.308 26.532 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49718 1656 44625 416981;416982 328940;328941 328941 2 STPEHTWSSRK Unmodified 1314.6317 0.63166267 199 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By matching 8 3.46 1 3 1 1 1 1 10.913 10.053 3 0.01467 16026 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.288 30.262 31870000 27796000 0 0 0 0 0 0 0 809620 0 0 0 1553600 1711200 0 49719 199 44626 416983;416984;416985;416986 328942;328943 328942 2 STPENHPETPK Unmodified 1235.5782 0.57823012 2891 Q6KC79 NIPBL Nipped-B-like protein yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 10.512 7.1935 3 0.002452 10116 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 63.944 42.905 24824000 0 24824000 0 0 0 0 0 0 0 0 0 0 0 0 0 49720 2891 44627 416987;416988 328944;328945 328945 2 STPHRTPIITPNTK Unmodified 1561.8576 0.85763986 4577 Q9NQW6 ANLN Actin-binding protein anillin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.211 27.409 3 0.00071426 28349 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 61.423 48.251 215460000 0 0 0 13267000 11066000 24375000 19161000 15376000 20110000 15257000 29090000 19904000 16201000 17464000 14184000 49721 4577 44628 416989;416990;416991;416992;416993;416994;416995;416996;416997;416998;416999;417000 328946;328947;328948;328949;328950 328950 5 STPLSQPSANGVQTEGLDYDRLK Unmodified 2475.2241 0.22414587 3371 Q8N8S7 ENAH Protein enabled homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 70.205 68.994 3 1.3413E-115 87365 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 168.68 156.72 791500000 31798000 329090000 10432000 18254000 22409000 34084000 30352000 28754000 30107000 36358000 36533000 49056000 29145000 34906000 70221000 49722 3371 44629 417001;417002;417003;417004;417005;417006;417007;417008;417009;417010;417011;417012;417013;417014;417015;417016 328951;328952;328953;328954;328955;328956;328957;328958;328959;328960;328961;328962;328963;328964;328965;328966;328967;328968;328969;328970;328971 328958 21 STPLTHDGQPK Unmodified 1179.5884 0.58840088 3598 Q8WY36 BBX HMG box transcription factor BBX yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 12.708 12.804 3 0.01722 12132 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 55.353 35.049 53369000 0 0 0 4734200 3767800 4309500 4554300 3301100 3483900 4582700 0 14998000 6055300 3582600 0 49723 3598 44630 417017;417018;417019;417020;417021;417022;417023;417024;417025;417026 328972;328973;328974 328973 0 STPPLAASGMAPGPFAGPQAQQAAR Acetyl (Protein N-term);Oxidation (M) 2436.1856 0.1855923 3869 Q96HR3 MED30 Mediator of RNA polymerase II transcription subunit 30 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 79.596 79.726 3 3.5323E-13 92069 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 62.19 49.002 45938000 0 0 0 0 0 4835400 7041100 4192700 5165300 8289600 7505600 0 8908700 0 0 49724 3869 44631 417027;417028;417029;417030;417031;417032;417033 328975;328976;328977;328978;328979;328980;328981 328981 5377 7 STPPPNNLVNPVQELETERRVK Unmodified 2516.3347 0.33469938 3418 Q8NDI1 EHBP1 EH domain-binding protein 1 yes yes 0 0 2 By MS/MS 2 0 1 1 80.733 72.603 4 0.0026791 95230 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 34.65 30.755 19647000 19647000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49725 3418 44632 417034 328982 328982 1 STPPTLETVR Unmodified 1099.5873 0.58733824 3414 Q8ND24 RNF214 RING finger protein 214 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 41.56 41.694 2 0.035324 46543 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 68.016 27.913 121270000 0 0 0 8796900 9895400 0 12954000 15090000 9084200 12369000 14202000 17244000 13026000 8608000 0 49726 3414 44633 417035;417036;417037;417038;417039;417040;417041;417042;417043;417044 328983 328983 0 STPQPPSGK Unmodified 897.4556 0.45559579 1351 P35269 GTF2F1 General transcription factor IIF subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 11.601 11.748 2 0.043067 10893 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 43.769 11.159 56798000 0 0 0 3390200 3248900 3581100 4166000 4390000 4351200 5051300 4799600 6941600 4991200 3998400 7888100 49727 1351 44634 417045;417046;417047;417048;417049;417050;417051;417052;417053;417054;417055;417056 328984 328984 1 STPSGFTLDDVIQTGVDNPGHPYIMTVGCVAGDEESYEVFK Oxidation (M) 4447.0148 0.01481289 967 P12277 CKB Creatine kinase B-type yes yes 0 1 0 By MS/MS 2 0 2 2 97.004 88.873 3;4 1.628E-38 114823 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.28 60.022 64309000 64309000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49728 967 44635 417057;417058 328985;328986 328986 1280 2 STPSGFTLDDVIQTGVDNPGHPYIMTVGCVAGDEESYEVFK Unmodified 4431.0199 0.019898268 967 P12277 CKB Creatine kinase B-type yes yes 0 0 0 By MS/MS 2 0 2 2 97.943 89.812 3;4 1.9784E-21 115915 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.665 53.545 113270000 113270000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49729 967 44635 417059;417060 328987;328988 328987 2 STPSLPCMVSAQDAPLPK Unmodified 1897.9278 0.92776962 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.023 80.082 2 3.0875E-05 92332 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.647 67.085 47935000 0 0 0 1920600 1831200 3147400 1939300 3876600 2111400 4546800 4952000 5884600 4550800 4413100 8761300 49730 2193 44636 417061;417062;417063;417064;417065;417066;417067;417068;417069;417070;417071;417072 328989;328990;328991;328992;328993;328994;328995;328996;328997 328992 9 STPSTSTTPTATQPTSLGQLAVQSPGQSNQTTNPK Unmodified 3512.7231 0.72306304 3084 Q7Z3K3 POGZ Pogo transposable element with ZNF domain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.545 71.611 3 1.8899E-20 82526 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 48.204 42.992 55142000 0 0 0 2786400 4024000 4434600 5193100 4761200 2831800 6399900 4016300 5603400 5106800 3683900 6300600 49731 3084 44637 417073;417074;417075;417076;417077;417078;417079;417080;417081;417082;417083;417084 328998;328999;329000;329001;329002;329003;329004 328998 7 STPVNVPISQK Unmodified 1168.6452 0.64518747 3549 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 45.027 45.379 2 0.00074428 50701 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 77.533 54.18 301930000 0 0 0 0 0 48342000 0 23466000 16208000 48149000 35713000 34938000 29972000 0 65142000 49732 3549 44638 417085;417086;417087;417088;417089;417090;417091;417092 329005;329006;329007;329008;329009;329010;329011;329012;329013;329014 329009 10 STPVSQLGSADFPEAPDPFQPLGADSGDPFQSK Unmodified 3388.5735 0.57354526 4836 Q9UBC2 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 96.581 92.556 3 4.8843E-22 114375 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.44 68.9 34761000 0 34761000 0 0 0 0 0 0 0 0 0 0 0 0 0 49733 4836 44639 417093;417094 329015;329016 329015 2 STPVTSAVQIPEVK Unmodified 1454.7981 0.7980593 3913 Q96KR1 ZFR Zinc finger RNA-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 72.026 71.479 2 3.245E-13 81959 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 110.66 94.524 303800000 0 86388000 0 11633000 10763000 14233000 13497000 11970000 12820000 20559000 21550000 26672000 22295000 21853000 29571000 49734 3913 44640 417095;417096;417097;417098;417099;417100;417101;417102;417103;417104;417105;417106;417107;417108 329017;329018;329019;329020;329021;329022;329023;329024;329025;329026;329027;329028;329029;329030 329024 14 STPVTVVLPDTK Unmodified 1255.7024 0.702368 2481 Q15029 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 4 1 1 1 1 1 1 1 1 1 1 1 1 68.545 67.473 2 0.00013753 77681 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 110.46 79.085 1562100000 2935300 855610000 0 39581000 37475000 45371000 52075000 39486000 40567000 57435000 72574000 91314000 56591000 63620000 107490000 49735 2481 44641 417109;417110;417111;417112;417113;417114;417115;417116;417117;417118;417119;417120;417121;417122;417123;417124;417125 329031;329032;329033;329034;329035;329036;329037;329038;329039;329040;329041;329042;329043;329044;329045;329046;329047;329048;329049 329046 18 STPYKPIDDRITNK Unmodified 1646.8628 0.86278482 3388 Q8NB90 SPATA5 Spermatogenesis-associated protein 5 yes yes 0 0 2 By MS/MS By matching 2 0 2 1 1 41.56 36.389 3 0.032865 50454 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.282 33.046 15487000 13889000 0 1598700 0 0 0 0 0 0 0 0 0 0 0 0 49736 3388 44642 417126;417127 329050 329050 0 STQAPLIIRPDSGNPLDTVLK Unmodified 2234.227 0.22704641 1481 P43490 NAMPT Nicotinamide phosphoribosyltransferase yes yes 0 0 1 By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 85.998 86.145 3 0.010086 100032 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 26.742 23.644 76129000 0 0 0 0 0 3580800 1918200 5149000 2204600 8913100 6641300 5625000 0 5397600 36699000 49737 1481 44643 417128;417129;417130;417131;417132;417133;417134;417135;417136 329051 329051 1 STQDEINQAR Unmodified 1160.5422 0.54217896 4836 Q9UBC2 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.826 15.996 2 0.0016688 15632 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 103.74 93.325 94008000 0 0 0 5346200 3249000 5857200 6947100 3894500 3006600 5833400 12560000 11124000 9887900 12396000 13906000 49738 4836 44644 417137;417138;417139;417140;417141;417142;417143;417144;417145;417146;417147;417148 329052;329053;329054;329055;329056;329057;329058;329059;329060 329053 6 STQDEINQARSK Unmodified 1375.6692 0.66917039 4836 Q9UBC2 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 18.378 14.778 3 0.0045562 19364 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.089 50.431 24339000 0 24339000 0 0 0 0 0 0 0 0 0 0 0 0 0 49739 4836 44645 417149;417150 329061;329062 329061 2 STQEEIWTLR Unmodified 1261.6303 0.63026569 399 O60437 PPL Periplakin yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 70.348 70.293 2 0.003113 81539 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 77.677 65.15 7247800 0 0 0 2936400 0 0 0 2324000 0 0 1987400 0 0 0 0 49740 399 44646 417151;417152;417153 329063;329064;329065 329065 3 STQESLTAGGTDLK Unmodified 1406.6889 0.68890278 2518 Q15345 LRRC41 Leucine-rich repeat-containing protein 41 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 38.582 38.784 2 5.3689E-18 42754 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 137.01 108.83 20893000 0 0 0 0 0 0 10309000 0 0 0 0 0 10584000 0 0 49741 2518 44647 417154;417155;417156;417157;417158;417159 329066;329067;329068;329069;329070 329069 5 STQGVTLTDLQEAEK Unmodified 1618.805 0.80499517 232 O14974 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.193 64.285 2 2.2828E-14 73457 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 101.39 81.249 84215000 0 0 0 5679700 6335000 4869800 5787400 5174000 3144000 8791300 8916600 10879000 5962400 6209700 12466000 49742 232 44648 417160;417161;417162;417163;417164;417165;417166;417167;417168;417169;417170;417171 329071;329072;329073;329074;329075;329076;329077;329078;329079;329080;329081;329082;329083 329080 13 STQLLQAAAAEASLNK Unmodified 1614.8577 0.85769944 2651 Q2M2I8 AAK1 AP2-associated protein kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.39 3.7 5 1 12 1 3 2 1 1 1 1 1 1 1 1 1 1 1 1 77.292 75.876 2;3 1.755E-10 87773 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 119.39 105.48 403970000 9950600 290660000 6273000 3828400 5039000 6720000 5437600 8128900 4986100 10720000 10263000 13827000 5176200 8501800 14458000 49743 2651 44649 417172;417173;417174;417175;417176;417177;417178;417179;417180;417181;417182;417183;417184;417185;417186;417187;417188;417189 329084;329085;329086;329087;329088;329089;329090;329091;329092;329093;329094;329095;329096;329097;329098;329099 329093 15 STQNSFRAESSQTCHSEQGDK Unmodified 2383.0095 0.009478427 1496 P46063 RECQL ATP-dependent DNA helicase Q1 yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS 7.09 3.85 4 7 2 2 1 1 1 1 1 1 1 15.684 14.525 3;4 1.0762E-37 21206 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 122.19 119.22 665710000 405710000 0 229470000 4106200 1828800 0 0 2455700 0 3431400 3912900 5540200 0 0 9254500 49744 1496 44650 417190;417191;417192;417193;417194;417195;417196;417197;417198;417199;417200 329100;329101;329102;329103;329104 329101 5 STQNSFRAESSQTCHSEQGDKK Unmodified 2511.1044 0.10444144 1496 P46063 RECQL ATP-dependent DNA helicase Q1 yes yes 0 0 2 By MS/MS 2 0 2 2 15.363 11.251 3;4 2.3124E-10 16687 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.69 82.449 43809000 43809000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49745 1496 44651 417201;417202 329105;329106 329106 2 STQPISSVGK Unmodified 1002.5346 0.53457439 3111 Q7Z6E9 RBBP6 E3 ubiquitin-protein ligase RBBP6 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 20.871 21.065 2 0.014232 21367 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 50.805 9.1733 62347000 0 0 0 3307500 2735600 4728100 4149500 6252400 3582000 5760700 6139200 9741900 8217700 0 7732900 49746 3111 44652 417203;417204;417205;417206;417207;417208;417209;417210;417211;417212;417213 329107;329108 329107 2 STQPLNTR Unmodified 915.47739 0.47739386 3107 Q7Z5K2 WAPAL Wings apart-like protein homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 11.983 12.127 2 0.013044 11221 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 73.248 0 17518000 0 0 0 0 0 3676900 2104200 1998400 0 3249100 0 3786700 0 2702800 0 49747 3107 44653 417214;417215;417216;417217;417218;417219 329109 329109 1 STQQDIYAGSVQPILR Unmodified 1774.9214 0.92136233 2449 Q14807 KIF22 Kinesin-like protein KIF22 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 2 1 1 1 1 73.832 73.894 2;3 0.0093006 85183 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 31.42 28.476 82421000 0 0 0 2683500 4172200 7078700 6535900 5352900 5832900 7545400 6920200 10289000 7252500 5696700 13061000 49748 2449 44654 417220;417221;417222;417223;417224;417225;417226;417227;417228;417229;417230;417231;417232 329110;329111;329112;329113;329114 329110 5 STQTILGQQR Unmodified 1130.6044 0.60438529 2434 Q14687 GSE1 Genetic suppressor element 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 29.936 30.236 2 0.0028915 32781 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 79.059 43.763 52779000 0 0 0 0 0 4788100 6934200 4487100 4437300 6240900 6335800 5151500 8085300 0 6318800 49749 2434 44655 417233;417234;417235;417236;417237;417238;417239;417240;417241;417242 329115;329116;329117;329118;329119;329120;329121;329122;329123;329124 329121 9 STQYLNQHQTAAMCK Oxidation (M) 1795.7982 0.79815243 3179 Q86W56 PARG Poly(ADP-ribose) glycohydrolase yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 26.173 21.46 3 0.00031728 30139 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.045 56.899 58124000 38528000 19596000 0 0 0 0 0 0 0 0 0 0 0 0 0 49750 3179 44656 417243;417244 329125;329126;329127 329126 4794 3 STQYLNQHQTAAMCK Unmodified 1779.8032 0.80323781 3179 Q86W56 PARG Poly(ADP-ribose) glycohydrolase yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 37.416 31.71 3 0.0030267 43590 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.3 33.696 76479000 54795000 21684000 0 0 0 0 0 0 0 0 0 0 0 0 0 49751 3179 44656 417245;417246 329128;329129;329130 329130 3 STQYQELLQDLSEK Unmodified 1680.8206 0.82064524 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 88.589 84.545 2 0.0050187 105237 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.903 56.564 52502000 0 52502000 0 0 0 0 0 0 0 0 0 0 0 0 0 49752 5049 44657 417247;417248 329131;329132 329131 2 STREALNNK Unmodified 1031.536 0.53597137 3839 Q96FV9 THOC1 THO complex subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 6.3372 3.377 2 0.020449 5274 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.86 55.842 198400000 130660000 37933000 29805000 0 0 0 0 0 0 0 0 0 0 0 0 49753 3839 44658 417249;417250;417251 329133;329134 329133 2 STRESFNPESYELDK Acetyl (Protein N-term) 1842.8272 0.82718718 1610 P49903 SEPHS1 Selenide, water dikinase 1 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 72.515 67.071 2 1.8863E-233 85370 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 275.82 245.38 419490000 15507000 397680000 6306200 0 0 0 0 0 0 0 0 0 0 0 0 49754 1610 44659 417252;417253;417254;417255 329135;329136;329137;329138;329139 329135 5 STRPQPSQVGSSR Unmodified 1385.7011 0.70113922 4865 Q9UBZ4 APEX2 DNA-(apurinic or apyrimidinic site) lyase 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 10.276 10.403 3 0.007003 8800 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 43.315 35.21 70805000 0 0 0 4606800 3358400 9976100 5453700 4153300 4125500 5860600 9790100 7447900 5792800 0 10240000 49755 4865 44660 417256;417257;417258;417259;417260;417261;417262;417263;417264;417265;417266 329140;329141;329142;329143;329144;329145;329146;329147 329145 2 STSAPQMSPGSSDNQSSSPQPAQQK Oxidation (M) 2547.1143 0.11433743 2380 Q14157 UBAP2L Ubiquitin-associated protein 2-like yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 19.713 19.772 3 3.0424E-08 20153 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 48.852 46.09 78524000 0 0 0 11046000 0 11513000 19797000 0 0 19134000 0 0 17034000 0 0 49756 2380 44661 417267;417268;417269;417270;417271 329148;329149;329150;329151;329152 329149 3876 5 STSAPQMSPGSSDNQSSSPQPAQQK Unmodified 2531.1194 0.11942281 2380 Q14157 UBAP2L Ubiquitin-associated protein 2-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 1 1 2 1 1 1 2 2 2 2 2 30.119 30.39 2;3 1.0034E-86 32716 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 129.43 122.97 474990000 0 0 0 29411000 19410000 19723000 41255000 36704000 25241000 34145000 61778000 47897000 40870000 54637000 63921000 49757 2380 44661 417272;417273;417274;417275;417276;417277;417278;417279;417280;417281;417282;417283;417284;417285;417286;417287;417288;417289 329153;329154;329155;329156;329157;329158;329159;329160;329161;329162;329163;329164;329165;329166;329167;329168 329161 16 STSEENIGIK Unmodified 1076.535 0.53496832 3696 Q92990 GLMN Glomulin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 28.097 28.323 2 0.0052216 29255 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 69.825 44.902 75226000 0 0 0 6278600 0 9169300 6932600 5420600 3844000 9742900 0 10304000 6298900 5994100 11242000 49758 3696 44662 417290;417291;417292;417293;417294;417295;417296;417297;417298;417299;417300 329169;329170;329171;329172;329173;329174 329173 6 STSEPAVPPEEAEPHTEPEEQVPVEAEPQNIEDEAK Unmodified 3937.7865 0.78651074 2191 Q12797 ASPH Aspartyl/asparaginyl beta-hydroxylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 72.476 72.614 3 5.1322E-15 83679 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 39.687 38.141 73277000 0 0 0 0 0 10222000 10853000 5848100 8177700 16658000 0 15198000 6320000 0 0 49759 2191 44663 417301;417302;417303;417304;417305;417306;417307 329175;329176;329177;329178;329179;329180;329181;329182;329183 329182 9 STSESTAALGCLVK Unmodified 1422.7024 0.70244436 749 P01859 IGHG2 Ig gamma-2 chain C region no no 0 0 0 By MS/MS 10 0 1 1 63.552 62.858 2 0.0020987 72507 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 70.808 49.344 26098000 0 0 0 26098000 0 0 0 0 0 0 0 0 0 0 0 49760 749 44664 417308 329184 329184 1 STSFDRMQSALK Unmodified 1369.666 0.66599927 3683 Q92900 UPF1 Regulator of nonsense transcripts 1 yes yes 0 0 1 By MS/MS 2 0 1 1 56.69 48.509 3 0.011604 66207 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.693 28.621 170500000 170500000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49761 3683 44665 417309 329185 329185 1 STSGEGFQFGK Unmodified 1143.5197 0.51965261 1601;32 P49792;P0DJD0;P0DJD1;A6NKT7;Q7Z3J3 RANBP2;RGPD1;RGPD2;RGPD3;RGPD4 E3 SUMO-protein ligase RanBP2;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RanBP2-like and GRIP domain-containing protein 3;RanBP2-like and GRIP domain-containing protein 4 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.978 43.153 2 0.00087888 48482 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 76.605 66.694 155610000 0 0 0 8331500 8375300 13328000 9428600 11215000 10255000 16584000 13650000 12896000 15838000 12934000 22776000 49762 1601;32 44666 417310;417311;417312;417313;417314;417315;417316;417317;417318;417319;417320;417321 329186;329187;329188;329189;329190;329191;329192;329193;329194;329195;329196;329197 329186 11 STSGFCQGGGVGGFGGGR Unmodified 1643.7111 0.71105198 103 CON__Q7Z794;Q7Z794 KRT77 Keratin, type II cytoskeletal 1b yes no 0 0 0 By MS/MS 10 0 1 1 51.151 51.367 2 5.9154E-10 57173 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 83.137 70.561 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49763 103 44667 417322 329198 329198 1 STSGGTAALGCLVK Unmodified 1320.6708 0.6707503 748 P01857 IGHG1 Ig gamma-1 chain C region no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 59.675 59.459 2 9.2405E-06 68913 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 89.827 56.564 100100000 0 0 0 87878000 3998000 0 0 3893700 4328700 0 0 0 0 0 0 49764 748 44668 417323;417324;417325;417326 329199;329200;329201;329202 329201 4 STSHDRVPQSVQIR Unmodified 1608.8332 0.83321603 2776 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 yes yes 0 0 1 By MS/MS By matching By matching By MS/MS 10 0 4 1 1 1 1 28.978 29.31 4 0.016641 31137 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 35.891 30.576 47534000 0 0 0 0 0 4507900 0 0 0 6809700 11964000 24252000 0 0 0 49765 2776 44669 417327;417328;417329;417330 329203 329203 1 STSHFRTGEEDK Unmodified 1392.627 0.62697123 127 O00193 SMAP Small acidic protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.06 3.8 5 1 10 2 2 2 1 1 1 1 1 1 1 1 1 1 7.3166 6.2545 2;3 0.0015532 4054 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.473 47.335 2721000000 2451100000 26425000 206310000 1959900 1685200 0 5626700 0 4097200 3070800 3760800 5136700 2877200 3576800 5331800 49766 127 44670 417331;417332;417333;417334;417335;417336;417337;417338;417339;417340;417341;417342;417343;417344;417345;417346 329204;329205;329206;329207;329208;329209 329204 6 STSHTSDFNPNSGSDQR Unmodified 1835.767 0.76704654 4047 Q99700 ATXN2 Ataxin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.969 17.149 3 0.0013324 15940 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.91 37.84 84209000 0 0 0 6254500 4115100 7216900 3999100 4868100 4987500 5430900 6866700 12337000 6393900 7750000 13990000 49767 4047 44671 417347;417348;417349;417350;417351;417352;417353;417354;417355;417356;417357;417358 329210;329211;329212 329210 3 STSIQSFK Unmodified 896.46035 0.46034682 986 P13797 PLS3 Plastin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.4 3.68 4 1 10 1 3 1 1 1 1 1 1 1 1 1 1 1 30.133 29.021 2 0.0051142 31381 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 108.09 94.312 4430300000 123650000 3785200000 31324000 31419000 0 63823000 43815000 23893000 27232000 66460000 72857000 61434000 33074000 66150000 0 49768 986 44672 417359;417360;417361;417362;417363;417364;417365;417366;417367;417368;417369;417370;417371;417372;417373 329213;329214;329215;329216;329217;329218;329219;329220;329221;329222;329223;329224;329225;329226;329227;329228;329229 329217 17 STSLASVSQLASK Unmodified 1277.6827 0.68269519 4733 Q9NXV6 CDKN2AIP CDKN2A-interacting protein yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 65.797 58.691 2 3.6499E-07 75578 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115 100.6 277160000 15757000 261400000 0 0 0 0 0 0 0 0 0 0 0 0 0 49769 4733 44673 417374;417375 329230;329231 329230 0 STSLDVEPIYTFR Unmodified 1526.7617 0.76167379 371 O43815 STRN Striatin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.76 81.822 2 6.4519E-05 93857 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 104.79 83.423 108380000 0 0 0 3894100 6287400 7862500 5801600 6611500 6572700 11452000 11656000 14738000 5687500 7385600 20431000 49770 371 44674 417376;417377;417378;417379;417380;417381;417382;417383;417384;417385;417386;417387 329232;329233;329234;329235;329236;329237;329238;329239;329240;329241;329242;329243 329239 11 STSLETQDDDNIR Unmodified 1492.6641 0.66414459 2882 Q6IA86 ELP2 Elongator complex protein 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 31.227 31.422 2 8.7546E-10 33839 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 117.02 99.158 56182000 0 0 0 3121900 2343000 5395800 4466100 3682400 0 4708800 4859500 7514500 5433700 5238500 9417300 49771 2882 44675 417388;417389;417390;417391;417392;417393;417394;417395;417396;417397;417398 329244;329245;329246;329247;329248;329249 329248 6 STSLETQDDDNIRLK Unmodified 1733.8432 0.84317159 2882 Q6IA86 ELP2 Elongator complex protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.12 3.89 3 1 4 1 2 1 1 1 1 1 47.845 44.176 3 1.7111E-16 57319 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.32 106.76 211050000 25499000 156060000 6138000 0 0 0 0 7739200 0 0 0 0 0 15612000 0 49772 2882 44676 417399;417400;417401;417402;417403;417404;417405;417406 329250;329251;329252;329253;329254;329255;329256;329257;329258 329250 9 STSLFETAWEAK Unmodified 1368.6561 0.65614609 1636 P50748 KNTC1 Kinetochore-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 82.717 79.112 2 0.00075315 98641 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.93 89.037 124450000 0 111480000 12974000 0 0 0 0 0 0 0 0 0 0 0 0 49773 1636 44677 417407;417408 329259;329260 329259 1 STSLSALVR Unmodified 932.5291 0.52909508 2830 Q5VZ89 DENND4C DENN domain-containing protein 4C yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 54.581 54.714 2 0.020914 60990 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 52.716 22.297 61808000 0 0 0 5689400 6056100 0 11416000 6991200 0 5902200 4750800 9717900 6222900 0 5061700 49774 2830 44678 417409;417410;417411;417412;417413;417414;417415;417416;417417 329261;329262 329262 2 STSMDSGSSESPASLK Oxidation (M) 1585.6777 0.67774575 2581 Q15811 ITSN1 Intersectin-1 yes yes 0 1 0 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 21.765 22.259 2 0.00071711 22284 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.343 38.452 + 16435000 0 0 0 0 0 0 0 0 0 3016800 3573900 6387100 0 0 3457500 49775 2581 44679 417418;417419;417420;417421 329263 329263 4230 1 STSMDSGSSESPASLK Unmodified 1569.6828 0.68283113 2581 Q15811 ITSN1 Intersectin-1 yes yes 0 0 0 By MS/MS 10 0 1 1 31.472 32.181 2 0.023753 34109 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.157 44.891 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49776 2581 44679 417422 329264 329264 1 STSNETMQAVEDGDSK Unmodified 1697.705 0.70502313 2649 Q2KHR3 QSER1 Glutamine and serine-rich protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.324 32.511 2 1.0082E-06 35513 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 101.6 98.862 68701000 0 0 0 2930200 3024900 4841100 4593000 5545900 3370400 5842300 10473000 8371300 7034400 4636800 8037700 49777 2649 44680 417423;417424;417425;417426;417427;417428;417429;417430;417431;417432;417433;417434 329265;329266;329267;329268;329269;329270;329271;329272;329273;329274;329275;329276 329267 12 STSNETMQAVEDGDSK Oxidation (M) 1713.6999 0.69993775 2649 Q2KHR3 QSER1 Glutamine and serine-rich protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 16.455 16.652 2 0.003934 16175 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 41.052 34.669 13962000 0 0 0 981830 710410 0 1476500 0 951200 1865000 1909400 2554900 0 1293000 2219300 49778 2649 44680 417435;417436;417437;417438;417439;417440;417441;417442;417443 329277 329277 4315 1 STSPIIGSPPVR Unmodified 1209.6717 0.67173657 3133 Q86TB9 PATL1 Protein PAT1 homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 3 1 53.9 53.973 2 0.0073147 60656 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 50.284 33.258 117990000 0 0 0 8712200 9971100 8477100 10766000 11033000 9942000 9331600 11710000 0 28669000 9379800 0 49779 3133 44681 417444;417445;417446;417447;417448;417449;417450;417451;417452;417453;417454;417455 329278;329279;329280;329281;329282;329283;329284;329285;329286;329287;329288 329282 10 STSPSDSLPCSLAGSPAPSPAPSPAPAGL Unmodified 2675.2749 0.27486082 4227 Q9BXK1 KLF16 Krueppel-like factor 16 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 85.496 85.622 3 0.033034 99533 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 16.801 10.835 8584100 0 0 0 0 0 0 0 0 0 0 0 0 3729500 0 4854600 49780 4227 44682 417456;417457 329289 329289 1 STSQTFIYK Unmodified 1073.5393 0.53932542 397 O60341 KDM1A Lysine-specific histone demethylase 1A yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.899 40.078 2 0.0067484 44509 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 74.255 45.743 340580000 0 0 0 16783000 20244000 23664000 23924000 22991000 18996000 33774000 32704000 35566000 29353000 23571000 59008000 49781 397 44683 417458;417459;417460;417461;417462;417463;417464;417465;417466;417467;417468;417469 329290;329291;329292;329293;329294;329295 329294 4 STSQVAASLLASK Unmodified 1261.6878 0.68778057 4733 Q9NXV6 CDKN2AIP CDKN2A-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 62.704 61.579 2;3 5.1847E-13 70391 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 135.99 114.52 410520000 100200000 4306400 0 17169000 18074000 20105000 26294000 16716000 15866000 30097000 31747000 38487000 26932000 23514000 41014000 49782 4733 44684 417470;417471;417472;417473;417474;417475;417476;417477;417478;417479;417480;417481;417482;417483;417484;417485 329296;329297;329298;329299;329300;329301;329302;329303;329304;329305;329306;329307;329308;329309 329306 13 STSSFSCLSR Unmodified 1130.5026 0.50262234 79 CON__P35908v2;P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.502 36.684 2 0.0008873 40449 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 117.89 60.712 + 2316800000 0 0 0 541890000 147590000 152220000 136840000 110580000 121500000 147360000 118020000 247040000 315490000 196730000 81580000 49783 79 44685 417486;417487;417488;417489;417490;417491;417492;417493;417494;417495;417496;417497 329310;329311;329312;329313;329314;329315;329316;329317;329318;329319;329320;329321;329322;329323 329311 14 STSSGHREISSPR Unmodified 1399.6804 0.68040378 3073 Q7Z2W4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 6.8577 6.9611 3 0.0036461 4875 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 43.761 36.88 40062000 0 0 0 2217100 3205800 0 4211700 4659700 5120500 5229200 9154000 4467000 1797200 0 0 49784 3073 44686 417498;417499;417500;417501;417502;417503;417504;417505;417506 329324;329325;329326;329327 329324 4 STSSPSLHSR Unmodified 1057.5152 0.51523593 4345 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 7.7702 8.0398 2 0.040246 6406 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 54.982 26.808 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49785 4345 44687 417507;417508 329328;329329 329329 2 STSSTLCPAVCPAAGHTLTPDREGK Unmodified 2612.2323 0.2322845 3482 Q8TBN0 RAB3IL1 Guanine nucleotide exchange factor for Rab-3A yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 60.599 53.82 3;4 1.0645E-12 72717 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.36 72.636 58728000 43164000 0 15564000 0 0 0 0 0 0 0 0 0 0 0 0 49786 3482 44688 417509;417510;417511 329330;329331;329332 329331 3 STSTPNVHMVSTTLPVDSR Unmodified 2027.9946 0.99460363 769 P04049 RAF1 RAF proto-oncogene serine/threonine-protein kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 65.99 65.923 3 0.0044038 75730 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 27.129 23.741 26037000 0 0 0 2597900 2585200 0 3026200 6600000 2607200 0 8620800 0 0 0 0 49787 769 44689 417512;417513;417514;417515;417516;417517 329333 329333 1 STSTPTSPGPR Unmodified 1086.5306 0.53055165 3576 Q8WWM7 ATXN2L Ataxin-2-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.532 13.693 2 0.00093439 13122 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 76.221 63.394 251930000 0 0 0 13627000 12508000 15327000 15001000 13464000 15810000 28009000 23132000 26716000 28458000 22618000 37263000 49788 3576 44690 417518;417519;417520;417521;417522;417523;417524;417525;417526;417527;417528;417529 329334;329335;329336;329337;329338;329339;329340;329341;329342;329343;329344;329345 329342 12 STSTSDPVIEDDHVQVLVLK Unmodified 2181.1165 0.11649291 2955 Q6PIJ6 FBXO38 F-box only protein 38 yes yes 0 0 0 By MS/MS 3 0 1 1 81.571 78.271 3 8.6487E-05 93776 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 37.999 32.608 10741000 0 10741000 0 0 0 0 0 0 0 0 0 0 0 0 0 49789 2955 44691 417530 329346 329346 1 STSVGPLYSGCR Unmodified 1282.5976 0.59758535 3593 Q8WXI7 MUC16 Mucin-16 yes no 0 0 0 By matching By MS/MS 10 0 2 1 1 41.657 42.259 2 0.0043631 46248 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.35 18.277 7525500 0 0 0 0 0 0 0 0 0 0 3729800 0 0 0 3795800 49790 3593 44692 417531;417532 329347 329347 1 STSVPENPK Unmodified 957.47673 0.47672516 775 P04150 NR3C1 Glucocorticoid receptor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 13.505 13.553 2 0.0051666 13024 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 81.548 42.575 209370000 0 0 0 30243000 0 30459000 39676000 31738000 30652000 46603000 0 0 0 0 0 49791 775 44693 417533;417534;417535;417536;417537;417538;417539;417540 329348;329349;329350;329351;329352;329353;329354 329348 6 STTELDDYSTNK Unmodified 1372.5994 0.59941907 3573 Q8WWI1 LMO7 LIM domain only protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.471 30.66 2 1.1894E-05 32955 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 132.88 123.49 99598000 0 0 0 5545500 7242100 7752900 7251500 6171600 6228600 7800000 9549100 13559000 8303000 6754400 13440000 49792 3573 44694 417541;417542;417543;417544;417545;417546;417547;417548;417549;417550;417551;417552 329355;329356;329357;329358;329359;329360;329361;329362;329363;329364;329365;329366;329367 329364 13 STTELPLTVSYDK Unmodified 1452.7348 0.73479034 3904 Q96KA5 CLPTM1L Cleft lip and palate transmembrane protein 1-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 71.187 71.253 2 0.01062 81866 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 45.661 31.543 63317000 0 0 0 4239800 0 7896300 5139800 0 4779900 10117000 8904100 14609000 7631600 0 0 49793 3904 44695 417553;417554;417555;417556;417557;417558;417559;417560 329368;329369;329370;329371;329372 329370 5 STTGAPSTTADSK Unmodified 1222.5677 0.56772501 5004 Q9ULT8 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.9378 8.0647 2 0.00099394 5598 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.713 72.051 48625000 0 0 0 2140600 1964400 4587800 3569900 3183800 2889700 4210400 7735500 5332300 4665500 3921800 4423000 49794 5004 44696 417561;417562;417563;417564;417565;417566;417567;417568;417569;417570;417571;417572 329373;329374;329375;329376;329377;329378;329379 329374 7 STTLDAGNIK Unmodified 1018.5295 0.52948901 494 O75400 PRPF40A Pre-mRNA-processing factor 40 homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 30.651 30.827 2 0.0014444 33952 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 106.38 84.422 289180000 0 0 0 16154000 18922000 15085000 28781000 16084000 20373000 28876000 34151000 42722000 0 29524000 38507000 49795 494 44697 417573;417574;417575;417576;417577;417578;417579;417580;417581;417582;417583 329380;329381;329382;329383;329384;329385;329386;329387;329388 329388 9 STTLFSR Unmodified 810.42357 0.42356738 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.666 35.848 2 0.02336 38081 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.369 58.066 7175300000 0 0 0 217920000 419050000 405020000 1500900000 1508500000 1489400000 321380000 476300000 700160000 23710000 33495000 79469000 49796 1714 44698 417584;417585;417586;417587;417588;417589;417590;417591;417592;417593;417594;417595 329389;329390;329391;329392;329393;329394;329395 329392 6 STTPGGTGIKPFLER Unmodified 1559.8308 0.83075641 4577 Q9NQW6 ANLN Actin-binding protein anillin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 60.302 60.356 3 0.010574 69150 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 25.957 17.358 75518000 0 0 0 6707600 5655600 0 9821700 6236300 0 11877000 9754800 9450300 7153400 8861500 0 49797 4577 44699 417596;417597;417598;417599;417600;417601;417602;417603;417604 329396;329397;329398;329399 329396 4 STTPMAPGVFLTQR Unmodified 1504.7708 0.77079869 5053 Q9UPP1 PHF8 Histone lysine demethylase PHF8 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 77.716 77.908 2 0.042528 89581 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 30.331 22.682 12397000 0 0 0 0 0 0 0 0 0 0 0 0 0 3576900 8819600 49798 5053 44700 417605;417606 329400 329400 1 STTPTSSPFR Unmodified 1079.5247 0.52473799 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 32.863 32.994 2 0.0063034 36187 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 65.465 47.48 200410000 0 0 0 17195000 0 23695000 26215000 27160000 19850000 0 34749000 0 29551000 21997000 0 49799 5216 44701 417607;417608;417609;417610;417611;417612;417613;417614 329401;329402;329403;329404;329405 329404 3 STTQANRMSVDAVEIETLRK Oxidation (M) 2264.1431 0.14305878 1977 P78347 GTF2I General transcription factor II-I yes yes 0 1 2 By MS/MS 2 0 2 2 62.706 54.437 3;4 2.8346E-47 73522 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 133.21 124.82 166740000 166740000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49800 1977 44702 417615;417616 329406;329407;329408;329409 329408 3186 4 STTQANRMSVDAVEIETLRK Unmodified 2248.1481 0.14814416 1977 P78347 GTF2I General transcription factor II-I yes yes 0 0 2 By MS/MS 2 0 2 2 74.559 66.428 3;4 1.514E-07 87715 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.631 56.98 176980000 176980000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49801 1977 44702 417617;417618 329410;329411 329411 2 STTQELMEDDRVK Unmodified 1550.7246 0.72463636 1802 P58107 EPPK1 Epiplakin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 38.307 38.484 3 0.0037659 41601 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 48.704 41.665 49545000 0 0 0 5337700 3970600 5136200 0 0 4318700 4670400 7694800 6264200 0 6492700 5659800 49802 1802 44703 417619;417620;417621;417622;417623;417624;417625;417626;417627 329412;329413;329414;329415;329416;329417;329418;329419 329417 8 STTQVADSGYQR Unmodified 1311.6055 0.6055075 3733 Q96A65 EXOC4 Exocyst complex component 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.144 19.34 2 2.194E-05 18516 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 103.26 77.818 50409000 0 0 0 2730600 4021800 3187700 3035400 3922100 1322000 4700000 3666500 7604900 5495200 4471900 6251100 49803 3733 44704 417628;417629;417630;417631;417632;417633;417634;417635;417636;417637;417638;417639 329420;329421;329422;329423;329424;329425;329426;329427;329428;329429;329430;329431;329432 329427 13 STTSDIPHMLNQVESK Oxidation (M) 1801.8516 0.85162779 2693 Q52LJ0 FAM98B Protein FAM98B yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 1 1 6 1 1 1 1 1 1 1 1 48.485 47.497 3 2.3643E-05 53660 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 75.574 69.004 163870000 0 36233000 30840000 15867000 0 21809000 0 0 13343000 0 0 0 15046000 11748000 18983000 49804 2693 44705 417640;417641;417642;417643;417644;417645;417646;417647 329433;329434;329435;329436;329437;329438;329439;329440 329439 4349 4 STTSDIPHMLNQVESK Unmodified 1785.8567 0.85671317 2693 Q52LJ0 FAM98B Protein FAM98B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 68.2 66.945 3 0.00092857 82401 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 60.209 42.509 1084400000 18796000 845900000 36099000 9500900 8070200 16052000 11217000 12983000 10567000 20454000 15149000 18247000 10546000 14866000 35938000 49805 2693 44705 417648;417649;417650;417651;417652;417653;417654;417655;417656;417657;417658;417659;417660;417661;417662;417663 329441;329442;329443;329444;329445;329446;329447;329448 329443 2 STTSGEELVVQVPVVDVQSNNFK Unmodified 2475.2493 0.24929799 3857 Q96GM8 TOE1 Target of EGR1 protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 89.566 85.512 3 1.9924E-13 106383 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.357 78.07 185980000 0 185980000 0 0 0 0 0 0 0 0 0 0 0 0 0 49806 3857 44706 417664;417665 329449;329450 329449 0 STTSLTSSSTSGSSDK Unmodified 1531.6849 0.68493962 1418 P40692 MLH1 DNA mismatch repair protein Mlh1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13.787 13.393 2 7.7556E-42 12337 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 160.22 149.99 355610000 5058500 7256700 0 15643000 18433000 24322000 23783000 20715000 17874000 36278000 33898000 38975000 31636000 27032000 54711000 49807 1418 44707 417666;417667;417668;417669;417670;417671;417672;417673;417674;417675;417676;417677;417678;417679 329451;329452;329453;329454;329455;329456;329457;329458;329459;329460;329461;329462 329454 12 STTSTIESFAAQEK Unmodified 1498.7151 0.71511753 630 O95232 LUC7L3 Luc7-like protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 1 2 2 2 2 2 2 2 2 2 2 2 60.466 60.605 2;3 6.6222E-19 69519 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 160.88 143.36 725950000 0 0 0 14040000 41010000 54037000 60160000 59470000 50768000 71704000 74551000 101020000 53088000 58926000 87176000 49808 630 44708 417680;417681;417682;417683;417684;417685;417686;417687;417688;417689;417690;417691;417692;417693;417694;417695;417696;417697;417698;417699;417700;417701;417702 329463;329464;329465;329466;329467;329468;329469;329470;329471;329472;329473;329474;329475;329476;329477;329478;329479;329480;329481;329482;329483 329478 20 STTSVSEEDVSSR Unmodified 1382.6161 0.61613177 3885 Q96IZ0 PAWR PRKC apoptosis WT1 regulator protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.193 22.397 2 1.7011E-15 22482 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 145.46 105.83 315340000 0 0 0 14434000 11315000 16767000 16915000 18132000 14942000 29723000 33894000 58289000 29129000 22022000 49776000 49809 3885 44709 417703;417704;417705;417706;417707;417708;417709;417710;417711;417712;417713;417714 329484;329485;329486;329487;329488;329489;329490;329491;329492;329493;329494;329495;329496;329497 329489 14 STTTGHLIYK Unmodified 1119.5924 0.59242362 1960 P68104;Q5VTE0;Q05639 EEF1A1;EEF1A1P5;EEF1A2 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.62 3.97 1 19 2 18 11 4 7 2 1 2 2 3 2 1 2 1 1 1 29.761 27.323 2 5.2705E-11 36882 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 163.15 104.55 74749000000 21057000000 10381000000 12091000000 1968400000 1882000000 2804200000 2445400000 3122400000 1754500000 2971300000 3032600000 4702100000 3805500000 2731800000 0 49810 1960 44710 417715;417716;417717;417718;417719;417720;417721;417722;417723;417724;417725;417726;417727;417728;417729;417730;417731;417732;417733;417734;417735;417736;417737;417738;417739;417740;417741;417742;417743;417744;417745;417746;417747;417748;417749;417750;417751;417752;417753;417754 329498;329499;329500;329501;329502;329503;329504;329505;329506;329507;329508;329509;329510;329511;329512;329513;329514;329515;329516;329517;329518;329519;329520;329521;329522;329523;329524;329525;329526;329527;329528;329529;329530;329531;329532;329533;329534;329535;329536;329537;329538;329539;329540;329541;329542;329543;329544;329545;329546;329547;329548;329549;329550;329551;329552;329553;329554;329555;329556;329557;329558;329559;329560;329561;329562;329563;329564;329565;329566;329567;329568;329569;329570;329571;329572;329573;329574;329575;329576;329577;329578;329579;329580;329581;329582;329583;329584 329532 85 STTTSDPPNICK Unmodified 1319.6027 0.60273031 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 25.565 25.769 2 0.0001659 27185 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 85.377 77.547 204780000 0 0 0 19685000 12938000 16469000 15678000 16711000 13222000 20543000 14929000 20335000 17162000 14513000 22595000 49811 5216 44711 417755;417756;417757;417758;417759;417760;417761;417762;417763;417764;417765;417766 329585;329586;329587;329588;329589;329590;329591;329592;329593;329594;329595 329592 11 STVDAEAVHK Unmodified 1055.5247 0.52473799 1694 P52701 MSH6 DNA mismatch repair protein Msh6 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.668 12.824 2 0.0017421 11929 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 88.948 63.211 155620000 0 0 0 9336700 7213000 15192000 11822000 9710100 8087900 17363000 12658000 12996000 18543000 13371000 19325000 49812 1694 44712 417767;417768;417769;417770;417771;417772;417773;417774;417775;417776;417777;417778 329596;329597;329598;329599;329600;329601;329602;329603;329604;329605;329606;329607;329608;329609 329597 14 STVDAPTAAGR Unmodified 1044.52 0.51998696 4065 Q99832 CCT7 T-complex protein 1 subunit eta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.388 19.584 2 2.5283E-08 19925 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 134.77 114.98 238960000 0 0 0 11922000 11117000 21592000 18111000 13929000 8995100 22571000 24522000 35034000 20801000 20003000 30362000 49813 4065 44713 417779;417780;417781;417782;417783;417784;417785;417786;417787;417788;417789;417790 329610;329611;329612;329613;329614;329615;329616;329617;329618;329619;329620;329621;329622 329615 6 STVEGIQASVK Unmodified 1117.5979 0.59790293 1073 P18206 VCL Vinculin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0.577 1 4 1 2 3 1 52.714 49.369 2 0.00054559 93658 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 99.013 57.584 1654900000 116250000 1532700000 5988300 0 0 0 0 0 0 0 0 0 0 0 0 49814 1073 44714 417791;417792;417793;417794;417795;417796 329623;329624;329625;329626;329627 329625 3 STVEHFSR Unmodified 961.46174 0.4617438 3638 Q92613 JADE3 Protein Jade-3 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 13.77 13.934 2 0.025559 12953 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 58.596 30.342 4894000 0 0 0 0 1308500 0 0 0 0 0 3585600 0 0 0 0 49815 3638 44715 417797;417798 329628 329628 1 STVGLNGLDESFCGR Unmodified 1610.7359 0.73586975 3283 Q8IYH5 ZZZ3 ZZ-type zinc finger-containing protein 3 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 73.808 73.731 2 0.024324 85233 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 44.299 27.274 8824000 0 0 0 0 3711300 0 0 0 0 0 5112700 0 0 0 0 49816 3283 44716 417799;417800 329629 329629 0 STVHEILCK Acetyl (Protein N-term) 1127.5645 0.56449431 840 P07355;A6NMY6 ANXA2;ANXA2P2 Annexin A2;Putative annexin A2-like protein yes no 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54.248 53.167 2 2.3968E-80 59193 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 209.11 160.55 6518200000 96267000 4943400000 99794000 107390000 67400000 52862000 64048000 74997000 52419000 95204000 158860000 152610000 145370000 172810000 234820000 49817 840 44717 417801;417802;417803;417804;417805;417806;417807;417808;417809;417810;417811;417812;417813;417814;417815 329630;329631;329632;329633;329634;329635;329636;329637;329638;329639;329640;329641;329642;329643;329644;329645;329646;329647;329648;329649;329650;329651;329652 329648 23 STVLQQQYNR Unmodified 1235.6258 0.62584901 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.579 30.768 2 1.1518E-16 33010 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 198.73 170 445830000 0 0 0 19170000 15894000 47069000 27109000 19526000 16639000 55539000 40030000 58214000 38185000 38789000 69668000 49818 5187 44718 417816;417817;417818;417819;417820;417821;417822;417823;417824;417825;417826;417827 329653;329654;329655;329656;329657;329658;329659;329660;329661;329662 329657 10 STVLQQQYNRVGK Unmodified 1519.8107 0.81068967 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 42.879 37.613 3 0.0015369 51545 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.848 53.185 95762000 94173000 0 1589600 0 0 0 0 0 0 0 0 0 0 0 0 49819 5187 44719 417828;417829 329663 329663 1 STVLQSELESCK Unmodified 1379.6602 0.66024519 3652 Q92696 RABGGTA Geranylgeranyl transferase type-2 subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 6.25 3.77 1 1 2 2 1 1 57.996 52.654 2 0.0001987 67584 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.22 97.231 300110000 0 300110000 0 0 0 0 0 0 0 0 0 0 0 0 0 49820 3652 44720 417830;417831;417832;417833 329664;329665;329666;329667 329664 4 STVLRNYK Unmodified 979.54508 0.5450795 1243 P29144 TPP2 Tripeptidyl-peptidase 2 yes yes 0 0 1 By MS/MS 2 0 1 1 23.563 18.587 2 0.039116 26642 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 143.61 54.706 36267000 36267000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49821 1243 44721 417834 329668 329668 0 STVLTPMFVETQASQGTLQTR Oxidation (M) 2310.1526 0.15256084 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 45 4 4 4 3 3 4 4 4 3 4 4 4 78.999 79.049 2;3 2.361E-148 91610 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 209.45 201.26 1010300000 0 0 0 37368000 71310000 85700000 47014000 74413000 67719000 109630000 110930000 103630000 64084000 81899000 156570000 49822 1986 44722 417835;417836;417837;417838;417839;417840;417841;417842;417843;417844;417845;417846;417847;417848;417849;417850;417851;417852;417853;417854;417855;417856;417857;417858;417859;417860;417861;417862;417863;417864;417865;417866;417867;417868;417869;417870;417871;417872;417873;417874;417875;417876;417877;417878;417879 329669;329670;329671;329672;329673;329674;329675;329676;329677;329678;329679;329680;329681;329682;329683;329684;329685;329686;329687;329688;329689;329690;329691;329692;329693;329694;329695;329696;329697;329698;329699;329700;329701;329702 329673 3238 29 STVLTPMFVETQASQGTLQTR Unmodified 2294.1576 0.15764621 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 1 3 1 1 1 2 1 1 2 83.912 84.032 2;3 1.4434E-63 97329 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 101.17 97.217 242970000 0 0 0 0 9240100 13492000 6999600 23128000 10653000 27299000 19934000 27948000 6632700 15294000 82347000 49823 1986 44722 417880;417881;417882;417883;417884;417885;417886;417887;417888;417889;417890;417891;417892;417893;417894 329703;329704;329705;329706;329707;329708;329709;329710;329711;329712;329713;329714;329715;329716;329717;329718;329719;329720 329703 18 STVNCSTTPVAER Unmodified 1420.6616 0.66164217 4023 Q99567 NUP88 Nuclear pore complex protein Nup88 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 25.26 25.462 2 1.7551E-08 26859 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 127.42 104.1 424750000 0 0 0 28410000 29886000 31683000 26417000 40626000 22707000 32268000 23931000 50231000 36230000 34068000 68296000 49824 4023 44723 417895;417896;417897;417898;417899;417900;417901;417902;417903;417904;417905;417906 329721;329722;329723;329724;329725;329726;329727;329728;329729 329725 9 STVNGVSWTNETQR Unmodified 1577.7434 0.74339797 5292 Q9Y6Q9 NCOA3 Nuclear receptor coactivator 3 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 47.777 47.793 2 0.0086512 53968 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 41.684 23.82 14771000 0 0 0 0 2446800 2608900 2751300 0 0 3571400 0 0 3392400 0 0 49825 5292 44724 417907;417908;417909;417910;417911;417912 329730;329731;329732;329733 329732 4 STVPHAYATADCDLGAVLK Unmodified 1987.9673 0.96732625 144 O00330 PDHX Pyruvate dehydrogenase protein X component, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 78.175 74.462 3 0.0043529 92958 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 37.334 29.38 53452000 0 50791000 2660600 0 0 0 0 0 0 0 0 0 0 0 0 49826 144 44725 417913;417914 329734;329735 329734 2 STVQCLTCHK Unmodified 1232.5642 0.56417674 1420 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 23.574 19.584 3 0.010988 26335 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 46.844 30.706 83648000 53335000 23868000 6444800 0 0 0 0 0 0 0 0 0 0 0 0 49827 1420 44726 417915;417916;417917 329736 329736 1 STVQTITVGGVSTSQFK Unmodified 1738.9101 0.91012895 2893 Q6MZP7 LIN54 Protein lin-54 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.393 71.464 2 5.3859E-10 82277 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 89.013 79.58 60175000 0 0 0 2915800 3170500 4253500 3495600 4356600 3873400 6484700 5319000 9211500 3748000 4973100 8373800 49828 2893 44727 417918;417919;417920;417921;417922;417923;417924;417925;417926;417927;417928;417929 329737;329738;329739;329740;329741;329742;329743;329744;329745;329746;329747;329748 329738 12 STVRDIDPQNDLTFLR Unmodified 1888.9643 0.96428978 4542 Q9NP97;Q8TF09 DYNLRB1;DYNLRB2 Dynein light chain roadblock-type 1;Dynein light chain roadblock-type 2 yes no 0 0 1 By matching By MS/MS 10 0 2 1 1 78.571 78.743 3 4.0792E-15 90566 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.992 58.859 25546000 0 0 0 0 0 0 0 0 0 4887900 0 0 0 0 20659000 49829 4542 44728 417930;417931 329749 329749 1 STVSETFMSK Unmodified 1115.5169 0.51687542 451 O75044;P0DMP2;P0DJJ0 SRGAP2;SRGAP2B;SRGAP2C SLIT-ROBO Rho GTPase-activating protein 2;SLIT-ROBO Rho GTPase-activating protein 2B;SLIT-ROBO Rho GTPase-activating protein 2C yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 42.489 42.65 2 0.009563 46410 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.55 44.283 21490000 0 0 0 0 2417700 2537000 2287800 0 0 0 0 0 3841800 3256000 7149800 49830 451 44729 417932;417933;417934;417935;417936;417937 329750 329750 1 STVSETYLSK Unmodified 1113.5554 0.55536941 3110 Q7Z6B7 SRGAP1 SLIT-ROBO Rho GTPase-activating protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 38.73 33.763 2 0.024959 44113 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 61.48 40.921 26679000 0 26679000 0 0 0 0 0 0 0 0 0 0 0 0 0 49831 3110 44730 417938 329751 329751 1 STVSLDPK Unmodified 845.44945 0.44944778 303 O43172 PRPF4 U4/U6 small nuclear ribonucleoprotein Prp4 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 26.842 26.923 2 0.025559 28053 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 58.596 30.173 210110000 0 0 0 20747000 23296000 0 29179000 27312000 22264000 38965000 0 48348000 0 0 0 49832 303 44731 417939;417940;417941;417942;417943;417944;417945 329752;329753 329753 2 STVTLSWKPVQK Unmodified 1372.7715 0.77145062 4278 Q9BZZ5 API5 Apoptosis inhibitor 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 57.481 57.768 3 0.0031761 64710 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.115 35.193 171460000 0 0 0 0 0 15047000 18289000 14080000 0 0 24050000 34877000 15890000 11319000 37904000 49833 4278 44732 417946;417947;417948;417949;417950;417951;417952;417953 329754;329755;329756;329757;329758;329759;329760;329761;329762 329757 8 STVVDNDADFQGTK Unmodified 1495.6791 0.67906638 3283 Q8IYH5 ZZZ3 ZZ-type zinc finger-containing protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.902 38.083 2 7.2914E-19 41979 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 147.72 140.86 127090000 0 0 0 9054200 9689900 11608000 6764000 7718000 4987800 15400000 14121000 21914000 9446300 6061900 10329000 49834 3283 44733 417954;417955;417956;417957;417958;417959;417960;417961;417962;417963;417964;417965 329763;329764;329765;329766;329767;329768;329769;329770;329771;329772;329773 329767 11 STVVPVPYEK Unmodified 1117.6019 0.60192568 1977 P78347 GTF2I General transcription factor II-I yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 55.991 54.667 2 0.00053181 62246 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 133.57 108.65 2942900000 36970000 525900000 6285100 171770000 153370000 179380000 175170000 152010000 124570000 208500000 211410000 273440000 241170000 176150000 306780000 49835 1977 44734 417966;417967;417968;417969;417970;417971;417972;417973;417974;417975;417976;417977;417978;417979;417980;417981 329774;329775;329776;329777;329778;329779;329780;329781;329782;329783;329784;329785;329786;329787;329788;329789;329790;329791;329792;329793;329794;329795;329796;329797;329798;329799;329800;329801;329802;329803;329804;329805;329806 329782 32 STVYPIFSASSVNSK Unmodified 1585.7988 0.79878758 2713 Q56NI9 ESCO2 N-acetyltransferase ESCO2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 73.981 74.173 2 1.1042E-09 85554 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 93.011 70.093 57166000 0 0 0 0 0 0 0 4386000 0 14286000 15392000 23102000 0 0 0 49836 2713 44735 417982;417983;417984;417985;417986 329807;329808;329809;329810;329811 329809 5 STWNALSPK Unmodified 1002.5134 0.51344502 2823 Q5VW36 FOCAD Focadhesin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.444 47.608 2 0.02892 53761 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 48.794 34.637 85843000 0 0 0 6312300 6629200 8973500 6226100 7058900 4102100 8306100 9712000 9625100 5115700 4842300 8939400 49837 2823 44736 417987;417988;417989;417990;417991;417992;417993;417994;417995;417996;417997;417998 329812;329813 329812 2 STYEQVDLIGK Unmodified 1251.6347 0.63468237 4588 Q9NR30 DDX21 Nucleolar RNA helicase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 58.642 58.815 2 0.00094189 67069 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 76.17 56.173 2689600 0 0 0 0 0 0 0 2689600 0 0 0 0 0 0 0 49838 4588 44737 417999;418000;418001;418002 329814;329815;329816;329817 329816 4 STYNNVLQLIK Unmodified 1291.7136 0.71360139 3970 Q96RL7 VPS13A Vacuolar protein sorting-associated protein 13A yes yes 0 0 0 By MS/MS 10 0 1 1 82.756 82.775 2 0.028876 95882 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 48.794 35.417 2166800 0 0 0 0 0 2166800 0 0 0 0 0 0 0 0 0 49839 3970 44738 418003 329818 329818 1 STYYWPR Unmodified 971.45012 0.45011648 577 Q4V326;Q13065;P0CL82;P0CL81;P0CL80;O76087;Q4V321;Q13070;Q13069;A6NER3;A6NDE8;A1L429 GAGE2E;GAGE1;GAGE12I;GAGE12G;GAGE12F;GAGE7;GAGE13;GAGE6;GAGE5;GAGE12J;GAGE12H;GAGE12B G antigen 2E;G antigen 1;G antigen 12I;G antigen 12G;G antigen 12F;G antigen 7;G antigen 13;G antigen 6;G antigen 5;G antigen 12J;G antigen 12H;G antigen 12B/C/D/E yes no 0 0 0 By MS/MS 10 0 1 1 52.028 52.705 2 0.015564 58820 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 117.7 100.77 37247000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37247000 49840 577 44739 418004 329819 329819 1 STYYWPRPR Unmodified 1224.604 0.60399136 577 Q4V326;Q13065;P0CL82;P0CL81;P0CL80;O76087;Q4V321;Q13070;Q13069;A6NER3;A6NDE8;A1L429 GAGE2E;GAGE1;GAGE12I;GAGE12G;GAGE12F;GAGE7;GAGE13;GAGE6;GAGE5;GAGE12J;GAGE12H;GAGE12B G antigen 2E;G antigen 1;G antigen 12I;G antigen 12G;G antigen 12F;G antigen 7;G antigen 13;G antigen 6;G antigen 5;G antigen 12J;G antigen 12H;G antigen 12B/C/D/E yes no 0 0 1 By matching By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 48.057 48.497 3 0.005883 53237 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.735 62.502 157270000 0 0 0 0 0 7234500 0 0 0 0 32958000 35595000 0 12922000 68563000 49841 577 44740 418005;418006;418007;418008;418009 329820;329821;329822;329823 329820 4 SVAAFTADPLSLLR Unmodified 1459.8035 0.80347903 3944 Q96P48 ARAP1 Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 94.198 94.324 2 0.00036274 109394 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.685 71.905 3519700 0 0 0 0 0 0 0 0 0 0 0 0 0 482120 3037600 49842 3944 44741 418010;418011 329824 329824 1 SVAAGCPVLLGK Unmodified 1170.6431 0.64307898 4574 Q9NQS1 AVEN Cell death regulator Aven yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 57.281 57.676 2 0.00075853 64738 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.92 52.139 78507000 0 0 0 0 0 0 0 0 0 0 14006000 23500000 17995000 9052200 13954000 49843 4574 44742 418012;418013;418014;418015;418016;418017;418018;418019;418020;418021;418022 329825;329826;329827;329828;329829;329830;329831;329832;329833;329834;329835 329828 10 SVAEGLSGSLVQEPFQLATEK Unmodified 2189.1216 0.12157828 5009 Q9ULW0 TPX2 Targeting protein for Xklp2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.27 3.19 3 2 17 4 1 1 2 2 1 2 2 2 1 2 2 88.616 87.855 2;3 3.8788E-112 108834 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 252.52 224.56 207020000 0 149540000 855090 0 2057000 2291000 0 3442500 2418000 9727200 7999000 7120400 1115500 3792700 16665000 49844 5009 44743 418023;418024;418025;418026;418027;418028;418029;418030;418031;418032;418033;418034;418035;418036;418037;418038;418039;418040;418041;418042;418043;418044 329836;329837;329838;329839;329840;329841;329842;329843;329844;329845;329846;329847;329848 329839 11 SVAENGDTDTQTSMFLDSRK Oxidation (M) 2216.9856 0.98555509 3283 Q8IYH5 ZZZ3 ZZ-type zinc finger-containing protein 3 yes yes 0 1 1 By MS/MS 10 0 1 1 46.811 46.974 3 0.0010868 52910 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 44.788 36.429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49845 3283 44744 418045 329849 329849 4888 1 SVAENGDTDTQTSMFLDSRK Unmodified 2200.9906 0.99064047 3283 Q8IYH5 ZZZ3 ZZ-type zinc finger-containing protein 3 yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 54.747 55.139 3 0.007582 62433 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 25.987 22.699 7370200 0 0 0 0 0 0 0 0 0 2830900 0 4539300 0 0 0 49846 3283 44744 418046;418047 329850 329850 1 SVAETPVHK Unmodified 966.51345 0.51344502 3075 Q7Z2Z1 TICRR Treslin yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 11.056 11.24 2 0.019171 8929 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 54.205 15.399 7448300 0 0 0 0 0 0 915850 891230 706300 1282200 0 0 872240 1044800 1735600 49847 3075 44745 418048;418049;418050;418051;418052;418053;418054 329851 329851 1 SVAFAAPR Acetyl (Protein N-term) 859.4552 0.45520186 2544 Q15532 SS18 Protein SSXT yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 61.54 61.634 2 0.0081018 70800 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 58.981 42.827 130480000 0 0 0 6805600 7577000 7880900 9013300 10197000 0 11801000 14108000 17028000 9479800 13786000 22800000 49848 2544 44746 418055;418056;418057;418058;418059;418060;418061;418062;418063;418064;418065 329852;329853;329854;329855;329856;329857;329858 329858 7 SVAFASARPR Acetyl (Protein N-term) 1102.5883 0.5883413 471 O75177 SS18L1 Calcium-responsive transactivator yes yes 1 0 1 By MS/MS 10 0 1 1 48.661 49.396 2 0.012896 55225 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 59.597 39.893 7541400 0 0 0 0 0 0 0 0 0 0 0 7541400 0 0 0 49849 471 44747 418066 329859 329859 0 SVAGGEIRGDTGGEDTAAPGR Acetyl (Protein N-term) 2013.9352 0.9351745 4429 Q9H773 DCTPP1 dCTP pyrophosphatase 1 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 2 2 1 1 1 1 1 2 2 2 45.27 45.401 2;3 1.4222E-09 49869 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.047 68.619 229590000 0 0 0 9528800 10826000 12040000 4475900 0 0 7060600 19463000 22107000 21201000 42714000 80175000 49850 4429 44748 418067;418068;418069;418070;418071;418072;418073;418074;418075;418076;418077;418078;418079;418080;418081 329860;329861;329862;329863;329864;329865;329866 329861 7 SVAGGFVYTYK Unmodified 1190.5972 0.59717465 2528 Q15393 SF3B3 Splicing factor 3B subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 62.076 61.53 2 0.00066247 70172 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 78.098 44.141 526900000 7287600 0 0 16428000 28368000 26802000 34042000 37952000 25293000 42143000 51684000 61158000 37826000 50239000 107680000 49851 2528 44749 418082;418083;418084;418085;418086;418087;418088;418089;418090;418091;418092;418093;418094 329867;329868;329869;329870;329871;329872;329873;329874;329875;329876;329877;329878;329879;329880;329881;329882;329883 329876 17 SVAGKEDNTDTDQEK Unmodified 1635.7224 0.72238775 3101 Q7Z4S6 KIF21A Kinesin-like protein KIF21A yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 6.4699 6.2985 2;3 2.5891E-35 4731 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 148.72 119.71 51727000 0 4188800 0 3791600 3398200 0 3785800 0 2210000 4433300 8624400 7440000 5118500 3495800 5240800 49852 3101 44750 418095;418096;418097;418098;418099;418100;418101;418102;418103;418104;418105 329884;329885;329886;329887;329888;329889;329890 329887 7 SVAMCEMEK Oxidation (M) 1099.4348 0.43480205 2296 Q13464 ROCK1 Rho-associated protein kinase 1 yes yes 0 1 0 By MS/MS 2 0 1 1 17.239 13.819 2 0.03462 18300 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.91 53.239 4309700 0 4309700 0 0 0 0 0 0 0 0 0 0 0 0 0 49853 2296 44751 418106 329891 329891 1 SVANPAFLK Unmodified 945.52837 0.5283668 4023 Q99567 NUP88 Nuclear pore complex protein Nup88 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 51.004 51.06 2 0.0073015 58648 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 72.789 35.801 146590000 0 0 0 10419000 11980000 0 17349000 21316000 15194000 0 0 33538000 19770000 17020000 0 49854 4023 44752 418107;418108;418109;418110;418111;418112;418113;418114;418115;418116 329892;329893;329894;329895;329896;329897;329898;329899;329900;329901;329902;329903;329904 329902 13 SVAPAAPTSCDFSPGDLVWAK Unmodified 2175.0307 0.030654786 1694 P52701 MSH6 DNA mismatch repair protein Msh6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 2 16 1 1 2 2 2 1 2 1 1 1 2 2 79.05 78.695 2;3;5 2.5975E-59 99718 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 161.21 141.6 317740000 225840000 0 6492200 0 4812400 7278700 0 7360600 3374000 12245000 5979800 6982500 3394300 9579200 24407000 49855 1694 44753 418117;418118;418119;418120;418121;418122;418123;418124;418125;418126;418127;418128;418129;418130;418131;418132;418133;418134 329905;329906;329907;329908;329909;329910;329911;329912;329913;329914;329915;329916;329917;329918;329919 329908 14 SVAQQASLTEQRLTVES Unmodified 1845.9432 0.94321999 1685 P52306 RAP1GDS1 Rap1 GTPase-GDP dissociation stimulator 1 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 67.536 62.76 2 0.00066169 80168 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.19 109.66 183120000 0 181290000 1831700 0 0 0 0 0 0 0 0 0 0 0 0 49856 1685 44754 418135;418136;418137 329920;329921 329920 2 SVARIGQTGTK Unmodified 1116.6251 0.62512073 1273 P30260 CDC27 Cell division cycle protein 27 homolog yes yes 0 0 1 By MS/MS 2 0 1 1 16.588 12.378 2 0.042872 18049 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.848 47.289 11900000 11900000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49857 1273 44755 418138 329922 329922 0 SVASDSMPALPR Unmodified 1229.6074 0.60742176 2301 Q13495 MAMLD1 Mastermind-like domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 58.665 58.771 2 0.0010167 66868 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 71.349 61.992 41612000 0 0 0 2772000 3150100 0 3460800 5469300 0 3156500 3779800 4905900 0 5825400 9092100 49858 2301 44756 418139;418140;418141;418142;418143;418144;418145;418146;418147;418148 329923;329924;329925;329926;329927;329928;329929;329930;329931;329932;329933 329925 9 SVASDVPEELDFLVPK Unmodified 1743.8931 0.8930819 2456 Q14966 ZNF638 Zinc finger protein 638 yes yes 0 0 0 By MS/MS 2 0 1 1 97.529 92.756 2 1.4643E-08 114853 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.13 91.282 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49859 2456 44757 418149 329934 329934 1 SVASDVPLYK Unmodified 1077.5706 0.57062555 3260 Q8IXJ9 ASXL1 Putative Polycomb group protein ASXL1 yes yes 0 0 0 By MS/MS 2 0 1 1 58.214 52.383 2 0.014232 67483 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.812 40.436 12687000 0 12687000 0 0 0 0 0 0 0 0 0 0 0 0 0 49860 3260 44758 418150 329935 329935 1 SVASGGWQEPENPHTQR Unmodified 1878.8609 0.86088734 4942 Q9UJW0 DCTN4 Dynactin subunit 4 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 6 4 2 2 1 1 1 1 38.453 36.043 3 0.0020663 45321 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 49.559 45.898 20015000 2333200 0 3386400 0 0 0 0 0 0 0 0 0 6156400 8139000 0 49861 4942 44759 418151;418152;418153;418154 329936;329937;329938;329939;329940 329938 5 SVASGGWQEPENPHTQRMNK Oxidation (M) 2268.0342 0.034177035 4942 Q9UJW0 DCTN4 Dynactin subunit 4 yes yes 0 1 1 By MS/MS 2 0 1 1 37.062 30.634 3 2.3744E-08 42685 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.97 76.529 24977000 24977000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49862 4942 44760 418155 329941;329942 329941 6284 2 SVASGGWQEPENPHTQRMNK Unmodified 2252.0393 0.039262413 4942 Q9UJW0 DCTN4 Dynactin subunit 4 yes yes 0 0 1 By MS/MS 2 0 1 1 42.565 35.829 3 0.00023892 49252 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.045 38.213 31138000 31138000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49863 4942 44760 418156 329943 329943 1 SVASNQSEMEFSSLQDMPK Unmodified 2113.9296 0.92962011 3308 Q8N163 CCAR2 Cell cycle and apoptosis regulator protein 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.82 76.88 2 7.2021E-74 88356 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 209.21 194.95 79992000 0 0 0 1949200 3741700 5972300 3294200 6661600 3056700 9278200 7577700 7176200 4183100 7911200 19191000 49864 3308 44761 418157;418158;418159;418160;418161;418162;418163;418164;418165;418166;418167;418168 329944;329945;329946;329947;329948;329949;329950;329951;329952;329953;329954 329947 11 SVASNQSEMEFSSLQDMPK Oxidation (M) 2129.9245 0.92453474 3308 Q8N163 CCAR2 Cell cycle and apoptosis regulator protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 2 2 1 1 1 2 2 1 1 2 2 67.574 67.628 2 5.6691E-24 80390 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.19 90.399 76523000 0 0 0 4899300 5856600 0 3777800 3021900 1709900 12317000 10710000 5119600 4992200 10521000 13597000 49865 3308 44761 418169;418170;418171;418172;418173;418174;418175;418176;418177;418178;418179;418180;418181;418182;418183;418184;418185 329955;329956;329957;329958;329959;329960;329961;329962;329963 329957 4900;4901 9 SVASNQSEMEFSSLQDMPK 2 Oxidation (M) 2145.9194 0.91944936 3308 Q8N163 CCAR2 Cell cycle and apoptosis regulator protein 2 yes yes 0 2 0 By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching 10 0 10 1 1 2 1 1 1 1 1 1 54.905 55.181 2;3 2.7961E-07 62818 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 77.078 77.078 63687000 0 0 0 0 0 4480200 6880700 0 13853000 4931400 6686400 11399000 5376300 4419600 5660800 49866 3308 44761 418186;418187;418188;418189;418190;418191;418192;418193;418194;418195 329964;329965;329966;329967 329966 4900;4901 4 SVASQFFTQEEGPGIDGMTTSER Oxidation (M) 2489.1016 0.10164748 3663 Q92797 SYMPK Symplekin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 77.205 77.28 3 4.9795E-08 89250 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 57.238 53.434 70406000 0 0 0 2331600 0 8189900 0 0 4382900 12033000 7752600 11325000 7517400 8481100 8393200 49867 3663 44762 418196;418197;418198;418199;418200;418201;418202;418203;418204 329968;329969;329970;329971;329972;329973;329974 329969 5196 7 SVASQFFTQEEGPGIDGMTTSER Unmodified 2473.1067 0.10673286 3663 Q92797 SYMPK Symplekin yes yes 0 0 0 By MS/MS 10 0 1 1 81.831 82.033 3 0.0094413 94615 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 29.576 25.175 6880300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6880300 49868 3663 44762 418205 329975 329975 0 SVASSQPAKPTK Unmodified 1199.651 0.65100113 2136 Q07157 TJP1 Tight junction protein ZO-1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 2 2 2 2 1 2 2 1 2 2 2 7.2317 7.3804 2;3 0.00090247 4273 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 68.676 40.762 238720000 0 0 0 0 13488000 7148900 18220000 16417000 563560 39377000 50244000 16496000 20534000 24253000 31982000 49869 2136 44763 418206;418207;418208;418209;418210;418211;418212;418213;418214;418215;418216;418217;418218;418219;418220;418221;418222;418223;418224;418225 329976;329977;329978;329979;329980;329981 329979 5 SVATEERAAPSTAPAEATPPKPGEAEAPPK Unmodified 2956.4778 0.47779438 694 O95817 BAG3 BAG family molecular chaperone regulator 3 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 50.069 44.213 4 2.3957E-20 55880 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 77.984 66.131 112730000 10411000 31694000 70622000 0 0 0 0 0 0 0 0 0 0 0 0 49870 694 44764 418226;418227;418228 329982;329983;329984;329985;329986 329986 5 SVAWAPSGNLLATCSR Unmodified 1688.8304 0.83043884 575 O76071 CIAO1 Probable cytosolic iron-sulfur protein assembly protein CIAO1 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.439 78.497 2 2.1622E-20 89865 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 131.17 125.69 133710000 0 0 0 4660900 8303400 6781800 6161500 9726700 5764300 8740500 12633000 13335000 11411000 14402000 31788000 49871 575 44765 418229;418230;418231;418232;418233;418234;418235;418236;418237;418238;418239;418240 329987;329988;329989;329990;329991;329992 329991 5 SVAWAPSGNLLATCSRDK Unmodified 1931.9523 0.95234489 575 O76071 CIAO1 Probable cytosolic iron-sulfur protein assembly protein CIAO1 yes yes 0 0 1 By MS/MS 2 0 1 1 79.667 71.536 3 7.4974E-05 93919 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.942 59.898 16894000 16894000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49872 575 44766 418241 329993 329993 1 SVCEMAENGVK Unmodified 1222.5322 0.5322079 4020 Q99541 PLIN2 Perilipin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 33.504 33.826 2 0.00028424 36566 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 93.178 76.705 34516000 0 0 0 0 0 2674700 2551600 0 2577800 3753300 5508300 9686300 0 2171900 5592100 49873 4020 44767 418242;418243;418244;418245;418246;418247;418248;418249 329994;329995;329996;329997;329998;329999;330000 330000 7 SVCEMAENGVK Oxidation (M) 1238.5271 0.52712253 4020 Q99541 PLIN2 Perilipin-2 yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 18.681 19.129 2 0.01087 19200 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 44.309 31.256 3818000 0 0 0 0 0 0 0 0 0 0 0 2574900 1243100 0 0 49874 4020 44767 418250;418251 330001 330001 5525 1 SVCTEAGMFAIR Oxidation (M) 1356.6166 0.61660624 1369 P35998 PSMC2 26S protease regulatory subunit 7 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 60.531 60.716 2 0.0015667 68936 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 63.283 56.979 105920000 0 0 0 0 10527000 8054300 0 0 0 13419000 16363000 27219000 8435700 8535300 13363000 49875 1369 44768 418252;418253;418254;418255;418256;418257;418258;418259 330002;330003;330004;330005 330004 2127 4 SVCTEAGMFAIR Unmodified 1340.6217 0.62169161 1369 P35998 PSMC2 26S protease regulatory subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 72.579 72.61 2 0.0014896 83590 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 81.338 65.456 64100000 0 0 0 3797700 5165800 7086700 0 4128200 0 10017000 11026000 13939000 0 0 8940300 49876 1369 44768 418260;418261;418262;418263;418264;418265;418266;418267 330006;330007;330008;330009;330010 330008 5 SVDDVLSHFAQR Unmodified 1372.6735 0.67352749 3204 Q86Y56 DNAAF5 Dynein assembly factor 5, axonemal yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.764 74.829 3 3.1185E-08 85804 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 121.68 115.98 220300000 0 0 0 6923400 7437500 28052000 9596200 16747000 16656000 21117000 16140000 25330000 15420000 18428000 38453000 49877 3204 44769 418268;418269;418270;418271;418272;418273;418274;418275;418276;418277;418278;418279 330011;330012;330013;330014;330015;330016;330017;330018;330019;330020;330021;330022 330015 11 SVDEALR Unmodified 788.40283 0.40283194 1317 P32119 PRDX2 Peroxiredoxin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 2 1 2 1 1 1 1 1 1 1 1 20.061 20.254 2 0.017319 20616 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 114.19 36.437 1809700000 0 0 0 202270000 0 66172000 69824000 11997000 45861000 90297000 310720000 267800000 77430000 178140000 489220000 49878 1317 44770 418280;418281;418282;418283;418284;418285;418286;418287;418288;418289;418290;418291;418292 330023;330024;330025;330026;330027;330028;330029;330030;330031 330030 3 SVDETLR Unmodified 818.4134 0.41339662 2131;2245 Q06830;Q13162 PRDX1;PRDX4 Peroxiredoxin-1;Peroxiredoxin-4 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 18.929 19.062 2 0.019157 19418 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 110.63 59.061 1089900000 0 0 0 201020000 75923000 0 0 114900000 0 0 0 442800000 0 255280000 0 49879 2131;2245 44771 418293;418294;418295;418296;418297 330032;330033;330034;330035;330036 330032 3 SVDETTQAMAFDGIIFQGQSLK Oxidation (M) 2401.1471 0.14714111 1202 P26368 U2AF2 Splicing factor U2AF 65 kDa subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 87.525 87.673 3 2.7666E-54 101779 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 112.57 103.86 35799000 0 0 0 0 0 4669200 2318100 2558800 0 20833000 5419600 0 0 0 0 49880 1202 44772 418298;418299;418300;418301;418302 330037;330038;330039 330038 1758 3 SVDEVFDEVVQIFDK Unmodified 1767.8567 0.85669639 1268 P30085 CMPK1 UMP-CMP kinase yes yes 0 0 0 By MS/MS By MS/MS 2.38 0.484 5 3 4 4 102.15 97.016 2;3 1.8788E-209 121252 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 304.68 278.64 1413900000 873890000 540000000 0 0 0 0 0 0 0 0 0 0 0 0 0 49881 1268 44773 418303;418304;418305;418306;418307;418308;418309;418310 330040;330041;330042;330043;330044;330045;330046;330047;330048;330049;330050 330049 10 SVDFDSLTVRTSK Unmodified 1453.7413 0.7412727 5236 Q9Y5K6 CD2AP CD2-associated protein yes yes 0 0 1 By MS/MS 2 0 1 1 64.225 60.469 3 0.044815 74955 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 32.624 23.091 7139300 0 0 7139300 0 0 0 0 0 0 0 0 0 0 0 0 49882 5236 44774 418311 330051 330051 1 SVDFRDPFEK Unmodified 1238.5932 0.5931519 3111 Q7Z6E9 RBBP6 E3 ubiquitin-protein ligase RBBP6 yes yes 0 0 1 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.559 65.646 3 0.027829 74331 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.625 23.995 77394000 0 0 0 4536100 3561500 6651800 5173000 5740000 4091500 6371700 7261900 8033900 7506900 8828000 9637300 49883 3111 44775 418312;418313;418314;418315;418316;418317;418318;418319;418320;418321;418322;418323 330052 330052 1 SVDGPIRLPIVDK Unmodified 1407.8086 0.80856441 1014 P15170 GSPT1 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 76.431 76.489 2;3 0.0014218 87777 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 60.157 40.061 1295400000 0 0 0 43952000 35863000 103900000 71391000 84880000 56154000 130910000 140810000 151170000 80696000 113620000 282080000 49884 1014 44776 418324;418325;418326;418327;418328;418329;418330;418331;418332;418333;418334;418335;418336;418337;418338;418339;418340;418341;418342;418343;418344;418345;418346;418347 330053;330054;330055;330056;330057;330058;330059;330060;330061;330062 330056 7 SVDIEVDLIRFSF Unmodified 1538.7981 0.7980593 4608 Q9NRN9 METTL5 Methyltransferase-like protein 5 yes yes 0 0 1 By MS/MS 2 0 2 2 99.146 91.015 2;3 2.2926E-06 115961 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.289 76.238 17876000 17876000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49885 4608 44777 418348;418349 330063;330064 330063 2 SVDIHDSIQPR Unmodified 1265.6364 0.6364137 5277 Q9Y6D6 ARFGEF1 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 42.225 37.817 3 0.0031251 49225 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 63.408 55.521 42608000 0 28507000 14101000 0 0 0 0 0 0 0 0 0 0 0 0 49886 5277 44778 418350;418351 330065 330065 1 SVDLAEYAPNLR Unmodified 1346.683 0.68302954 3180 Q86W92 PPFIBP1 Liprin-beta-1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.316 77.373 2 3.1296E-08 89640 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 129.38 114.71 680420000 0 0 0 20079000 33828000 37492000 35721000 54245000 49819000 68367000 79718000 88242000 52817000 62844000 97245000 49887 3180 44779 418352;418353;418354;418355;418356;418357;418358;418359;418360;418361;418362;418363 330066;330067;330068;330069;330070;330071;330072;330073;330074;330075;330076 330075 11 SVDNRPQAPLVSASAVNEEVSK Unmodified 2296.1659 0.16590271 5277 Q9Y6D6 ARFGEF1 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 2 1 1 1 1 1 1 1 1 1 61.648 61.496 3 0.00092462 76157 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 38.583 24.711 63505000 0 0 3154600 0 0 6299200 4415100 0 3349300 9977300 5542300 9609500 3647600 5100700 12410000 49888 5277 44780 418364;418365;418366;418367;418368;418369;418370;418371;418372;418373;418374 330077;330078;330079;330080;330081;330082;330083;330084 330081 8 SVDQLEK Unmodified 817.41815 0.41814765 4319 Q9H0A0 NAT10 N-acetyltransferase 10 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 14.961 15.063 2 0.044016 14311 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 66.993 6.6349 13675000 0 0 0 0 0 0 4645200 5375700 3654400 0 0 0 0 0 0 49889 4319 44781 418375;418376;418377 330085;330086 330086 2 SVDSTATADDTHK Unmodified 1346.595 0.5950024 3976 Q96RT1 ERBB2IP Protein LAP2 yes yes 0 0 0 By MS/MS 2 0 1 1 8.8062 5.5514 2 0.026904 8137 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 47.844 34.252 10965000 0 10965000 0 0 0 0 0 0 0 0 0 0 0 0 0 49890 3976 44782 418378 330087 330087 1 SVDVILDDDLVDK Unmodified 1444.7297 0.72970496 1183 P25205 MCM3 DNA replication licensing factor MCM3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 80.655 79.448 2 6.068E-21 99218 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 137.89 125.28 389030000 66512000 203600000 7207800 2302600 5233000 7399900 4908500 0 4867800 11509000 14993000 13507000 4581600 11310000 31093000 49891 1183 44783 418379;418380;418381;418382;418383;418384;418385;418386;418387;418388;418389;418390;418391;418392;418393 330088;330089;330090;330091;330092;330093;330094;330095;330096;330097;330098;330099;330100;330101;330102;330103;330104;330105 330097 15 SVDVLNTTPR Unmodified 1100.5826 0.58258722 3575 Q8WWL2 SPIRE2 Protein spire homolog 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 45.043 45.49 2 0.0035119 51074 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 76.221 51.446 28710000 0 0 0 0 0 0 0 0 3474700 0 6806800 5881100 5330700 3637700 3578900 49892 3575 44784 418394;418395;418396;418397;418398;418399 330106;330107;330108;330109;330110 330109 5 SVEAAAELSAK Unmodified 1074.5557 0.55570376 1117 P20962 PTMS Parathymosin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 2.83 2.38 3 38 6 5 9 34 4 1 1 1 2 59.523 56.489 1;2 1.2038E-06 47645 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 126.07 94.133 5559700000 460860000 4976800000 80324000 0 0 0 0 0 5067000 0 15050000 0 14131000 7464500 0 49893 1117 44785 418400;418401;418402;418403;418404;418405;418406;418407;418408;418409;418410;418411;418412;418413;418414;418415;418416;418417;418418;418419;418420;418421;418422;418423;418424;418425;418426;418427;418428;418429;418430;418431;418432;418433;418434;418435;418436;418437;418438;418439;418440;418441;418442;418443;418444;418445;418446;418447;418448;418449;418450;418451 330111;330112;330113;330114;330115;330116;330117;330118;330119;330120;330121;330122;330123;330124;330125;330126;330127;330128;330129;330130;330131;330132;330133;330134;330135;330136;330137;330138;330139;330140;330141;330142;330143;330144;330145;330146;330147;330148;330149;330150;330151;330152;330153;330154;330155;330156;330157;330158;330159;330160;330161;330162;330163;330164;330165;330166;330167;330168;330169;330170;330171;330172;330173;330174;330175;330176 330165 65 SVEAILEESTEK Unmodified 1333.6613 0.66129105 3903 Q96K76 USP47 Ubiquitin carboxyl-terminal hydrolase 47 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.42 3.66 3 1 8 1 2 1 1 1 1 1 1 1 1 1 73.527 68.253 2 5.1516E-22 83197 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 160.53 149.7 290020000 25224000 261110000 3682700 0 0 0 0 0 0 0 0 0 0 0 0 49894 3903 44786 418452;418453;418454;418455;418456;418457;418458;418459;418460;418461;418462;418463 330177;330178;330179;330180;330181;330182;330183;330184;330185;330186;330187;330188;330189 330181 13 SVEDEMDSPGEEPFYTGQGR Oxidation (M) 2244.9117 0.91172144 2199 Q12857 NFIA Nuclear factor 1 A-type yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.585 56.706 2 2.0848E-61 64391 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 133.16 129.71 132060000 0 0 0 5389900 5575100 9586900 8980600 7832800 9519900 14988000 14745000 13511000 9463600 12817000 19645000 49895 2199 44787 418464;418465;418466;418467;418468;418469;418470;418471;418472;418473;418474;418475 330190;330191;330192;330193;330194;330195;330196;330197;330198;330199;330200;330201;330202 330192 3567 13 SVEDEMDSPGEEPFYTGQGR Unmodified 2228.9168 0.91680682 2199 Q12857 NFIA Nuclear factor 1 A-type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 68.516 68.595 2;3 7.5758E-174 78141 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 251.84 245.75 326600000 0 0 0 12745000 10405000 15999000 16690000 19164000 15012000 34330000 45805000 30200000 25266000 27559000 73429000 49896 2199 44787 418476;418477;418478;418479;418480;418481;418482;418483;418484;418485;418486;418487;418488;418489;418490;418491;418492;418493;418494;418495;418496;418497;418498;418499 330203;330204;330205;330206;330207;330208;330209;330210;330211;330212;330213;330214;330215;330216;330217;330218 330208 15 SVEDRFDQQK Unmodified 1250.5891 0.58912916 1029 P15924 DSP Desmoplakin yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.41 2.1 2 25 1 1 2 3 2 2 2 2 2 2 2 2 2 2 22.137 22 2;3 3.4444E-09 23150 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 123.75 92.519 2900900000 2692300 0 11284000 512380000 213370000 172990000 186870000 518850000 130210000 126820000 240620000 273620000 262160000 115600000 133400000 49897 1029 44788 418500;418501;418502;418503;418504;418505;418506;418507;418508;418509;418510;418511;418512;418513;418514;418515;418516;418517;418518;418519;418520;418521;418522;418523;418524;418525;418526 330219;330220;330221;330222;330223;330224;330225;330226;330227;330228 330228 7 SVEDVRPHHTDANNQSACFEAPDQK Unmodified 2851.258 0.25798197 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 36.782 37.03 4 1.1033E-92 39664 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 142.42 141.48 143250000 0 0 0 0 5314500 12465000 9117500 0 10029000 18001000 16322000 20038000 14274000 14393000 23298000 49898 5216 44789 418527;418528;418529;418530;418531;418532;418533;418534;418535;418536 330229;330230;330231;330232;330233;330234;330235;330236;330237;330238;330239 330234 11 SVEEAQLAQEVK Unmodified 1329.6776 0.67760981 3526 Q8TF46 DIS3L DIS3-like exonuclease 1 yes yes 0 0 0 By MS/MS 2 0 1 1 53.211 47.419 2 0.0046551 61522 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.363 60.177 15202000 0 15202000 0 0 0 0 0 0 0 0 0 0 0 0 0 49899 3526 44790 418537 330240 330240 1 SVEEEIEQEK Unmodified 1218.5616 0.561577 3917 Q96LB3 IFT74 Intraflagellar transport protein 74 homolog yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 38.203 38.529 2 0.0024208 42767 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 83.783 67.31 34839000 0 0 0 0 3232700 0 0 0 0 4505200 6109700 8407100 4753000 3174000 4657700 49900 3917 44791 418538;418539;418540;418541;418542;418543;418544;418545 330241;330242;330243;330244;330245;330246;330247 330241 5 SVEEFMDSSVEDSK Unmodified 1587.661 0.66103305 1036 P16383 GCFC2 GC-rich sequence DNA-binding factor 2 yes yes 0 0 0 By MS/MS 2 0 1 1 66.296 60.378 2 0.0012832 77171 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.247 82.015 20940000 0 20940000 0 0 0 0 0 0 0 0 0 0 0 0 0 49901 1036 44792 418546 330248 330248 1 SVEEFQCLNR Unmodified 1280.5819 0.58193529 1118;5069 P21127;Q9UQ88 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A no no 0 0 0 By MS/MS 10 0 1 1 49.166 49.888 2 0.035118 55399 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.575 29.727 6185900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6185900 49902 1118;5069 44793 418547 330249 330249 1 SVEEGKIDGIIDK Unmodified 1401.7351 0.73512469 3732 Q96A49 SYAP1 Synapse-associated protein 1 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 51.332 51.043 3 0.0047238 58519 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 35.657 25.047 42654000 0 0 0 24789000 0 0 17865000 0 0 0 0 0 0 0 0 49903 3732 44794 418548;418549 330250;330251 330251 2 SVEEIAPDPSEAK Unmodified 1370.6565 0.65654002 4622 Q9NS91 RAD18 E3 ubiquitin-protein ligase RAD18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.347 42.524 2 4.1836E-08 47185 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 104.82 93.11 137270000 0 0 0 8470800 9168500 11971000 9845300 10550000 6684000 11942000 15224000 13739000 11282000 9491000 18904000 49904 4622 44795 418550;418551;418552;418553;418554;418555;418556;418557;418558;418559;418560;418561 330252;330253;330254;330255;330256;330257;330258;330259;330260;330261;330262 330257 11 SVEELLEAELLK Unmodified 1371.7497 0.74971212 3151 Q86UP2 KTN1 Kinectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 96.804 92.136 2 0.0001987 115458 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 119.22 88.487 67944000 23323000 44291000 329690 0 0 0 0 0 0 0 0 0 0 0 0 49905 3151 44796 418562;418563;418564;418565 330263;330264;330265 330265 3 SVEEPTQPGGTGLSDSR Unmodified 1715.7962 0.7962214 4321 Q9H0B6 KLC2 Kinesin light chain 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.972 38.153 2 1.3171E-38 42104 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 174.73 148.06 435390000 0 0 0 28904000 28755000 38943000 30694000 50283000 25539000 39463000 42772000 36862000 44198000 24945000 44033000 49906 4321 44797 418566;418567;418568;418569;418570;418571;418572;418573;418574;418575;418576;418577 330266;330267;330268;330269;330270;330271;330272;330273;330274;330275;330276;330277 330274 12 SVEESYITSEHCYQK Unmodified 1858.8043 0.80434324 4187 Q9BVI0 PHF20 PHD finger protein 20 yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 41.858 42.378 3 0.04332 46861 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 33.265 28.263 12722000 0 0 0 0 0 0 0 0 0 0 4865600 3719200 4136700 0 0 49907 4187 44798 418578;418579;418580 330278 330278 0 SVEEVASEIQPFLR Unmodified 1602.8253 0.82533668 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 1 2 2 2 2 2 2 2 2 2 2 2 87.863 87.951 2;3 2.277E-22 101764 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 147.74 111.32 95691000 0 0 0 1972900 4485200 5297400 3883500 15708000 4322800 14640000 9644500 8094200 3540100 5049200 19054000 49908 1029 44799 418581;418582;418583;418584;418585;418586;418587;418588;418589;418590;418591;418592;418593;418594;418595;418596;418597;418598;418599;418600;418601;418602;418603 330279;330280;330281;330282;330283;330284;330285;330286;330287;330288;330289;330290;330291;330292;330293;330294;330295;330296 330285 17 SVEGRPMFVSPCVDK Oxidation (M) 1722.8069 0.8069262 2475 Q15020 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS 5.2 3.92 3 2 2 1 1 1 53.334 49.321 2;3 0.00025549 67589 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.902 65.801 178920000 137460000 0 15117000 0 7244300 0 0 0 0 0 0 19096000 0 0 0 49909 2475 44800 418604;418605;418606;418607;418608 330297;330298;330299;330300;330301;330302 330298 4080 4 SVEGRPMFVSPCVDK Unmodified 1706.812 0.81201158 2475 Q15020 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 64.669 58.64 3 0.01451 72500 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 40.237 34.333 155030000 147280000 0 7755800 0 0 0 0 0 0 0 0 0 0 0 0 49910 2475 44800 418609;418610 330303;330304;330305 330305 3 SVEHVSPDTADAESGK Unmodified 1627.7326 0.73255851 3509 Q8TDY2 RB1CC1 RB1-inducible coiled-coil protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 2 2 4 25.356 21.186 2;3 0.00010779 26437 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 68.944 60.767 61317000 0 61317000 0 0 0 0 0 0 0 0 0 0 0 0 0 49911 3509 44801 418611;418612;418613;418614 330306;330307;330308 330308 3 SVELDLNQAHMEETPK Unmodified 1839.8673 0.86727785 2430 Q14680 MELK Maternal embryonic leucine zipper kinase yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 61.238 61.625 3 0.025697 69577 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 28.627 20.898 8611100 0 0 0 0 0 0 0 0 0 0 0 0 0 2849700 5761400 49912 2430 44802 418615;418616 330309 330309 1 SVELEDVK Unmodified 917.47058 0.47057715 4232 Q9BXS5;Q9Y6Q5 AP1M1;AP1M2 AP-1 complex subunit mu-1;AP-1 complex subunit mu-2 yes no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 35.517 35.685 2 0.023266 39463 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 60.478 34.254 146860000 0 0 0 8090000 5212900 15271000 8375600 7939000 5429600 11191000 11413000 16369000 0 16011000 41555000 49913 4232 44803 418617;418618;418619;418620;418621;418622;418623;418624;418625;418626;418627 330310;330311;330312 330312 3 SVELEEALPVTTAEGMAK Acetyl (Protein N-term);Oxidation (M) 1931.9398 0.93977409 3612 Q92522 H1FX Histone H1x yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.25 2.49 1 11 1 1 1 1 1 1 1 2 1 1 1 88.706 89.367 2 9.4418E-13 100868 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 93.011 79.348 37588000 5339000 0 0 0 3464300 4091200 0 0 3190700 5901200 4286400 0 3236000 3374700 4704600 49914 3612 44804 418628;418629;418630;418631;418632;418633;418634;418635;418636;418637;418638;418639 330313;330314;330315;330316;330317;330318;330319;330320;330321;330322;330323;330324;330325;330326;330327 330324 5107 14 SVELEEALPVTTAEGMAK Unmodified 1873.9343 0.93429479 3612 Q92522 H1FX Histone H1x yes yes 0 0 0 By MS/MS 2 0 1 1 85.626 80.852 2 3.1991E-05 100557 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.54 88.407 25361000 0 25361000 0 0 0 0 0 0 0 0 0 0 0 0 0 49915 3612 44804 418640 330328 330328 1 SVELEEALPVTTAEGMAK Acetyl (Protein N-term) 1915.9449 0.94485947 3612 Q92522 H1FX Histone H1x yes yes 1 0 0 By MS/MS 1 0 1 1 104.84 110.1 2 2.4474E-14 90498 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 125.61 93.114 12106000 12106000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49916 3612 44804 418641 330329 330329 1 SVELMSVYQYPEK Oxidation (M) 1587.7491 0.7490602 3713 Q969F9 HPS3 Hermansky-Pudlak syndrome 3 protein yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 11 8.2345 3 0.0053298 10610 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 50.207 30.996 93043000 0 5766500 87277000 0 0 0 0 0 0 0 0 0 0 0 0 49917 3713 44805 418642;418643 330330 330330 5291 1 SVEMHHEALSEALPGDNVGFNVK Oxidation (M) 2495.1751 0.17508719 1960 P68104;Q05639 EEF1A1;EEF1A2 Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 yes no 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 2 1 70.789 70.488 3;4 2.0073E-10 80508 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 66.045 57.757 48660000 0 0 3188100 0 0 13751000 3184200 0 0 0 0 20229000 0 8307100 0 49918 1960 44806 418644;418645;418646;418647;418648;418649 330331;330332;330333;330334;330335 330334 3151 4 SVEMHHEALSEALPGDNVGFNVK Unmodified 2479.1802 0.18017257 1960 P68104;Q05639 EEF1A1;EEF1A2 Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 4 3.46 3 1 1 1 1 1 77.544 73.75 3;4 2.0915E-30 94559 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.38 106.58 66823000 15606000 37179000 2923600 0 0 0 0 0 0 0 0 0 0 0 11115000 49919 1960 44806 418650;418651;418652;418653 330336;330337;330338;330339 330338 4 SVENLGVSYVK Unmodified 1193.6292 0.62920306 1583 P49643 PRIM2 DNA primase large subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.6 3.67 3 7 1 1 1 1 1 1 1 1 1 1 58.288 56.637 2 0.00029768 63609 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 103.01 77.066 500100000 5766600 391760000 4210700 0 4602700 12926000 11854000 0 0 0 14402000 14748000 0 13252000 26577000 49920 1583 44807 418654;418655;418656;418657;418658;418659;418660;418661;418662;418663 330340;330341;330342;330343;330344;330345;330346;330347;330348;330349 330343 9 SVENQMRYAQTQLDK Unmodified 1809.8679 0.86794655 2408 Q14457 BECN1 Beclin-1 yes yes 0 0 1 By matching By MS/MS 2 0 2 1 1 56.822 50.77 3 0.026595 63990 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 34.432 24.007 14360000 10342000 0 4018900 0 0 0 0 0 0 0 0 0 0 0 0 49921 2408 44808 418664;418665 330350 330350 1 SVEPQDAGPLER Unmodified 1296.631 0.63099397 4782 Q9NZT2 OGFR Opioid growth factor receptor yes yes 0 0 0 By MS/MS By matching By MS/MS By matching 10 0 4 1 1 1 1 39.858 39.828 2 0.00429 44289 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 73.887 44.737 34378000 0 0 0 9643400 0 0 7044500 7821600 0 9868600 0 0 0 0 0 49922 4782 44809 418666;418667;418668;418669 330351 330351 1 SVEPQDAGPLERSQGDEAGGHGEDRPEPLSPK Unmodified 3340.5556 0.55560378 4782 Q9NZT2 OGFR Opioid growth factor receptor yes yes 0 0 2 By MS/MS 2 0 1 1 53.32 49.407 5 0.00099998 61993 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 27.337 25.134 4258200 0 0 4258200 0 0 0 0 0 0 0 0 0 0 0 0 49923 4782 44810 418670 330352 330352 1 SVEPSEVK Unmodified 873.44436 0.4443624 3886 Q96IZ7 RSRC1 Serine/Arginine-related protein 53 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 15.212 15.345 2 0.015495 14150 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.787 43.788 46940000 0 0 0 0 3305600 3155600 5726000 4573300 3046700 4996100 0 0 6962900 7686400 7487500 49924 3886 44811 418671;418672;418673;418674;418675;418676;418677;418678;418679 330353;330354;330355;330356;330357;330358;330359;330360;330361 330355 9 SVEQQVIGFSGLSDDK Unmodified 1707.8315 0.83154427 4983 Q9UL15 BAG5 BAG family molecular chaperone regulator 5 yes yes 0 0 0 By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 77.989 78.095 2 0.00093839 89818 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.548 56.858 50516000 0 0 0 0 2909900 3660400 3394300 3607200 2481400 6935600 5642100 9994000 0 0 11891000 49925 4983 44812 418680;418681;418682;418683;418684;418685;418686;418687;418688 330362;330363;330364;330365 330363 4 SVESALR Unmodified 760.40792 0.40791731 455 O75116 ROCK2 Rho-associated protein kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 21.302 21.553 2 0.024035 22793 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 83.614 40.614 59454000 0 0 0 0 0 10267000 7582800 0 515160 10314000 11586000 0 0 7422000 11768000 49926 455 44813 418689;418690;418691;418692;418693;418694;418695 330366;330367 330366 2 SVESNIEDK Unmodified 1019.4771 0.47711909 1396 P38398 BRCA1 Breast cancer type 1 susceptibility protein yes yes 0 0 0 By MS/MS 2 0 1 1 22.629 18.746 2 0.041504 24828 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.074 22.515 10794000 0 10794000 0 0 0 0 0 0 0 0 0 0 0 0 0 49927 1396 44814 418696 330368 330368 1 SVESSQSETLIVPR Unmodified 1530.789 0.78895118 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 57.978 57.553 2 2.236E-19 65524 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 136.48 121.5 143910000 0 28725000 0 7776900 6765000 0 11700000 8768400 0 12500000 13853000 17152000 11609000 10136000 14924000 49928 2291 44815 418697;418698;418699;418700;418701;418702;418703;418704;418705;418706;418707;418708 330369;330370;330371;330372;330373;330374;330375;330376;330377;330378;330379;330380;330381;330382;330383 330372 15 SVESSQSETLIVPRSAK Unmodified 1816.9531 0.95305639 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 1 By MS/MS 2 0 1 1 51.677 47.757 3 0.015804 59950 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 35.176 16.763 5168700 0 0 5168700 0 0 0 0 0 0 0 0 0 0 0 0 49929 2291 44816 418709 330384 330384 1 SVESTSPEPSK Unmodified 1146.5404 0.54044763 1074 P18583 SON Protein SON yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 12.351 12.313 2 0.0079706 10998 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 62.823 52.409 8851300 0 0 0 1739900 2024700 0 2681500 0 2405300 0 0 0 0 0 0 49930 1074 44817 418710;418711;418712;418713 330385;330386 330385 2 SVEVNFTESLLRMAADDVEEYMIERPEPEFQDLNEK Oxidation (M) 4287.9828 0.98278448 4165 Q9BUL8 PDCD10 Programmed cell death protein 10 yes yes 0 1 2 By MS/MS 2 0 2 2 101.94 93.806 4 5.6482E-25 121535 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.827 56.066 43158000 43158000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49931 4165 44818 418714;418715 330387;330388 330388 5655;5656 2 SVEVNFTESLLRMAADDVEEYMIERPEPEFQDLNEK Unmodified 4271.9879 0.98786986 4165 Q9BUL8 PDCD10 Programmed cell death protein 10 yes yes 0 0 2 By MS/MS 2 0 2 2 103.77 95.644 3;4 2.2359E-249 122857 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 191.25 180.16 63610000 63610000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49932 4165 44818 418716;418717 330389;330390;330391 330389 3 SVEVQGETETIIATK Unmodified 1603.8305 0.83048164 430 O60763 USO1 General vesicular transport factor p115 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 64.459 58.885 2 3.4247E-41 76067 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 147.71 117.45 68458000 20523000 40646000 7289200 0 0 0 0 0 0 0 0 0 0 0 0 49933 430 44819 418718;418719;418720;418721;418722 330392;330393;330394;330395;330396;330397 330392 6 SVEYEGDLK Unmodified 1038.487 0.4869555 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 34.022 32.645 2 0.014201 41298 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.279 61.62 133750000 4669100 97042000 0 0 2837700 5347400 3794900 0 3719100 8720600 7623800 0 0 0 0 49934 2203 44820 418723;418724;418725;418726;418727;418728;418729;418730 330398;330399 330398 2 SVFALTNGIYPHK Unmodified 1445.7667 0.76669959 2083 Q02878 RPL6 60S ribosomal protein L6 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 75.77 75.962 3 0.0039455 87164 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.227 26.188 24142000 0 0 0 0 0 0 0 0 0 3595600 0 6138600 0 4019800 10388000 49935 2083 44821 418731;418732;418733;418734 330400;330401;330402 330400 3 SVFEAFGK Unmodified 883.44397 0.44396847 4912 Q9UHX1 PUF60 Poly(U)-binding-splicing factor PUF60 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 2 22 1 1 1 1 2 2 2 2 2 2 2 2 2 2 61.301 61.297 1;2 0.012427 69476 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 136.11 58.365 2504200000 196090 0 312570000 103290000 107630000 145760000 160180000 165490000 122000000 185400000 222330000 229700000 215060000 212430000 322140000 49936 4912 44822 418735;418736;418737;418738;418739;418740;418741;418742;418743;418744;418745;418746;418747;418748;418749;418750;418751;418752;418753;418754;418755;418756;418757;418758 330403;330404;330405;330406;330407;330408;330409;330410;330411;330412;330413;330414;330415;330416;330417 330416 14 SVFGTPTLETANK Unmodified 1363.6983 0.69834526 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63.463 62.424 2 6.6705E-08 71101 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 125.74 117.52 221570000 12531000 5622100 4201700 11979000 11764000 14714000 16424000 17879000 11239000 17397000 19646000 22569000 17095000 16335000 22172000 49937 1601 44823 418759;418760;418761;418762;418763;418764;418765;418766;418767;418768;418769;418770;418771;418772;418773 330418;330419;330420;330421;330422;330423;330424;330425;330426;330427;330428;330429;330430;330431;330432;330433 330431 15 SVFILGASGETGR Unmodified 1292.6725 0.67246486 4167 Q9BUP3 HTATIP2 Oxidoreductase HTATIP2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.836 69.913 2 1.3909E-05 80273 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 90.685 70.356 115780000 0 0 0 5621600 5199800 7664400 6815900 8970700 6842500 10305000 16658000 20069000 6817800 6437800 14380000 49938 4167 44824 418774;418775;418776;418777;418778;418779;418780;418781;418782;418783;418784;418785 330434;330435;330436;330437;330438;330439;330440;330441;330442;330443;330444;330445;330446;330447 330441 13 SVFINNVLSK Unmodified 1119.6288 0.62880913 3601 Q8WYP5 AHCTF1 Protein ELYS yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.935 72.003 2 0.010972 82603 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.064 32.978 39929000 0 0 0 2333900 2247100 4309200 3373100 3012500 1950700 3651300 4256200 4237300 3374800 2955100 4227200 49939 3601 44825 418786;418787;418788;418789;418790;418791;418792;418793;418794;418795;418796;418797 330448;330449;330450 330450 3 SVFLDQMK Oxidation (M) 982.47937 0.4793677 5280 Q9Y6E2 BZW2 Basic leucine zipper and W2 domain-containing protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39.31 38.412 2 0.01057 41098 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.903 41.679 913240000 73101000 379640000 58330000 24898000 23265000 37029000 38197000 25396000 26393000 40767000 45722000 40269000 36777000 33459000 29993000 49940 5280 44826 418798;418799;418800;418801;418802;418803;418804;418805;418806;418807;418808;418809;418810;418811;418812 330451;330452;330453;330454;330455;330456;330457;330458;330459;330460;330461;330462 330455 6690 11 SVFLDQMK Unmodified 966.48445 0.48445308 5280 Q9Y6E2 BZW2 Basic leucine zipper and W2 domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 57.094 57.214 2 0.014742 64806 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 69.998 48.452 611330000 0 0 0 31638000 35461000 58659000 38073000 33610000 29494000 59310000 80281000 66659000 40791000 43385000 93973000 49941 5280 44826 418813;418814;418815;418816;418817;418818;418819;418820;418821;418822;418823;418824 330463;330464;330465;330466;330467;330468;330469 330468 7 SVFLEQMK Oxidation (M) 996.49502 0.49501776 3043 Q7L1Q6 BZW1 Basic leucine zipper and W2 domain-containing protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.53 2.94 1 2 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 39.705 38.824 2 0.0040929 43076 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 102.77 81.092 1169000000 2098500 686710000 0 36319000 36061000 44349000 41756000 26368000 36082000 46542000 42520000 48307000 39326000 35576000 47009000 49942 3043 44827 418825;418826;418827;418828;418829;418830;418831;418832;418833;418834;418835;418836;418837;418838;418839 330470;330471;330472;330473;330474;330475;330476;330477;330478;330479 330477 4667 8 SVFLEQMK Unmodified 980.5001 0.50010314 3043 Q7L1Q6 BZW1 Basic leucine zipper and W2 domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8 3.46 3 9 1 1 1 1 1 1 1 1 1 1 1 1 59.553 58.044 2 0.013906 65367 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 71.342 53.018 2025400000 409130000 816330000 144420000 49153000 56191000 92245000 62116000 85760000 54903000 110210000 0 0 69109000 75873000 0 49943 3043 44827 418840;418841;418842;418843;418844;418845;418846;418847;418848;418849;418850;418851 330480;330481;330482;330483;330484;330485;330486;330487 330482 8 SVFPEQANNNEWAR Unmodified 1660.7594 0.75938238 308 O43242 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 63.17 63.211 2 1.4004E-19 73128 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 173.64 158.63 374560000 0 0 0 22644000 33280000 36314000 10568000 12717000 0 77711000 91871000 70696000 7172100 11584000 0 49944 308 44828 418852;418853;418854;418855;418856;418857;418858;418859;418860;418861 330488;330489;330490;330491;330492;330493;330494;330495;330496;330497;330498;330499;330500;330501 330500 14 SVFSQSGNSR Unmodified 1067.4996 0.49958587 1273 P30260 CDC27 Cell division cycle protein 27 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.968 19.163 2 0.00058764 19690 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 130.75 120.28 213500000 0 0 0 15031000 12012000 16913000 12866000 11119000 12917000 19461000 23097000 23259000 20747000 17054000 29021000 49945 1273 44829 418862;418863;418864;418865;418866;418867;418868;418869;418870;418871;418872;418873 330502;330503;330504;330505;330506;330507;330508;330509;330510;330511;330512 330504 10 SVFVGNIPYEATEEQLK Unmodified 1922.9626 0.96255845 1329;4333 P33240;Q9H0L4 CSTF2;CSTF2T Cleavage stimulation factor subunit 2;Cleavage stimulation factor subunit 2 tau variant no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 1 1 1 1 2 2 1 81.566 81.668 2;3 5.2767E-52 94589 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 158.11 152.16 328120000 0 0 0 0 15262000 17051000 13369000 18739000 16869000 36750000 31179000 42639000 23324000 44401000 68540000 49946 1329;4333 44830 418874;418875;418876;418877;418878;418879;418880;418881;418882;418883;418884;418885;418886;418887 330513;330514;330515;330516;330517;330518;330519;330520;330521;330522;330523;330524;330525;330526 330524 14 SVGAPGGAPTPALGPSAPQK Unmodified 1758.9264 0.92644771 4802 Q9P206 KIAA1522 Uncharacterized protein KIAA1522 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.482 55.609 2 8.9559E-15 63017 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 87.18 79.724 104060000 0 0 0 4517500 6372000 8026000 6498400 6061100 5056700 10234000 11632000 14528000 8919300 8020200 14193000 49947 4802 44831 418888;418889;418890;418891;418892;418893;418894;418895;418896;418897;418898;418899 330527;330528;330529;330530;330531;330532;330533;330534;330535;330536;330537;330538 330532 12 SVGDGETVEFDVVEGEK Unmodified 1794.816 0.81595379 1955;1044 P67809;Q9Y2T7;P16989 YBX1;YBX2;YBX3 Nuclease-sensitive element-binding protein 1;Y-box-binding protein 2;Y-box-binding protein 3 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.45 3.11 3 1 16 1 3 1 2 1 3 1 1 1 1 2 1 1 1 73.024 72.639 2 7.6448E-163 83049 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 216.34 207.93 2287000000 0 88843000 0 48892000 165670000 159640000 109710000 68873000 130150000 273380000 236400000 296380000 186660000 264560000 257840000 49948 1955;1044 44832 418900;418901;418902;418903;418904;418905;418906;418907;418908;418909;418910;418911;418912;418913;418914;418915;418916;418917;418918;418919 330539;330540;330541;330542;330543;330544;330545;330546;330547;330548;330549;330550;330551;330552;330553;330554;330555;330556;330557;330558;330559;330560;330561 330556 23 SVGDGLSTSAVGCASAAPR Unmodified 1761.8316 0.83156105 2097;913 Q03468;P0DP91 ERCC6 DNA excision repair protein ERCC-6 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 53.34 53.403 2 5.1393E-22 60587 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 130.24 116.84 77543000 0 0 0 8877400 9856900 0 12344000 7980200 0 0 0 18196000 0 0 20288000 49949 2097;913 44833 418920;418921;418922;418923;418924;418925;418926;418927;418928 330562;330563;330564;330565;330566;330567;330568;330569;330570 330567 9 SVGDNSSDLSNVAVIDGNR Unmodified 1917.9028 0.90281174 624 O95163 IKBKAP Elongator complex protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.034 65.121 2 4.3365E-17 74616 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 116.84 101.96 85742000 0 0 0 3283600 4002600 6535800 4624200 5462700 3099800 9924000 9649500 9206600 8733300 6464000 14755000 49950 624 44834 418929;418930;418931;418932;418933;418934;418935;418936;418937;418938;418939;418940 330571;330572;330573;330574;330575;330576;330577;330578;330579;330580;330581 330571 11 SVGEVMAIGR Unmodified 1017.5277 0.52771487 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 52.476 52.633 2 0.0077942 59758 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 61.602 49.833 70231000 0 0 0 3104100 3446300 0 0 4583100 3819300 0 10391000 10760000 5628800 8697700 19800000 49951 1300 44835 418941;418942;418943;418944;418945;418946;418947;418948;418949 330582;330583;330584;330585;330586;330587;330588;330589 330584 8 SVGEVMGIGR Unmodified 1003.5121 0.51206481 1224 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 51.914 51.384 2 0.025817 58043 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 59.35 29.165 4598600 0 0 0 0 4598600 0 0 0 0 0 0 0 0 0 0 49952 1224 44836 418950;418951 330590;330591 330590 2 SVGEVMGIGR Oxidation (M) 1019.507 0.50697943 1224 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 33.632 33.814 2 0.0061468 35909 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.96 34.94 38113000 0 0 0 0 4195900 0 4536200 3873300 3323800 0 0 0 8515600 6060300 7608100 49953 1224 44836 418952;418953;418954;418955;418956;418957;418958;418959 330592;330593;330594;330595;330596;330597;330598 330593 1797 7 SVGEVMGIGRSFEEAFQK Oxidation (M) 1985.9517 0.95167618 1224 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 0 1 1 By MS/MS 2 0 1 1 85.869 77.738 3 0.00019072 101380 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.107 59.897 21862000 21862000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49954 1224 44837 418960 330599 330599 1797 1 SVGGSGGGSFGDNLVTR Unmodified 1565.7434 0.74339797 757 P02545 LMNA Prelamin-A/C;Lamin-A/C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 54.792 54.924 2 2.9745E-36 61978 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 128.9 122.66 409180000 0 0 0 18268000 12946000 34246000 27275000 19862000 25898000 37874000 60582000 46364000 28397000 30178000 67292000 49955 757 44838 418961;418962;418963;418964;418965;418966;418967;418968;418969;418970;418971;418972 330600;330601;330602;330603;330604;330605;330606;330607;330608;330609;330610;330611;330612;330613;330614 330606 15 SVGMIAGGTGITPMLQVIR 2 Oxidation (M) 1932.0173 0.017253329 723 P00387 CYB5R3 NADH-cytochrome b5 reductase 3;NADH-cytochrome b5 reductase 3 membrane-bound form;NADH-cytochrome b5 reductase 3 soluble form yes yes 0 2 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 81.3 81.346 2 3.2954E-31 94303 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 105.19 90.746 64313000 0 0 0 1908500 3761500 6015100 4911200 6426400 3242500 9154200 6844700 12205000 5347500 4495800 0 49956 723 44839 418973;418974;418975;418976;418977;418978;418979;418980;418981;418982;418983 330615;330616;330617;330618;330619;330620;330621;330622;330623;330624;330625;330626 330625 872;873 12 SVGPDFGK Unmodified 805.39702 0.39701828 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.17 3.18 1 2 9 2 1 1 1 1 1 1 1 1 1 1 31.423 30.149 2 0.018072 40866 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.296 69.659 861370000 119980000 95211000 0 63823000 47188000 68920000 57628000 0 46203000 80022000 98014000 0 91389000 92992000 0 49957 1986 44840 418984;418985;418986;418987;418988;418989;418990;418991;418992;418993;418994;418995 330627;330628;330629 330628 2 SVGQGYSVGQSMR Oxidation (M) 1370.6249 0.62486274 4371 Q9H2P0 ADNP Activity-dependent neuroprotector homeobox protein yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 26.45 26.681 2 0.0090028 28488 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 41.283 34.979 25454000 0 0 0 0 1718100 2512200 3076100 2090500 1640800 2581500 2838800 3019400 3855300 0 2121000 49958 4371 44841 418996;418997;418998;418999;419000;419001;419002;419003;419004;419005 330630 330630 5828 1 SVGQYDNR Unmodified 937.42536 0.42535829 990 P13861 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 9.8553 9.993 2 0.015996 7332 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 67.981 48.344 33712000 0 0 0 2729700 1644900 2707700 0 2698600 2116900 2950200 4468800 5805300 3343400 0 5246500 49959 990 44842 419006;419007;419008;419009;419010;419011;419012;419013;419014;419015 330631;330632;330633;330634;330635 330633 5 SVGVHSVMK Oxidation (M) 958.4906 0.49060109 2097 Q03468 ERCC6 DNA excision repair protein ERCC-6 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 11.302 11.448 2 0.0021821 10510 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 93.429 58.073 28482000 0 0 0 2327000 2220100 0 0 2177700 2315900 3554800 0 3927500 4526600 3003600 4428800 49960 2097 44843 419016;419017;419018;419019;419020;419021;419022;419023;419024 330636;330637;330638;330639;330640;330641;330642;330643 330641 3396 7 SVGVHSVMK Unmodified 942.49569 0.49568646 2097 Q03468 ERCC6 DNA excision repair protein ERCC-6 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 29.472 24.488 2 0.027615 34509 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 119.86 77.972 60517000 49660000 10856000 0 0 0 0 0 0 0 0 0 0 0 0 0 49961 2097 44843 419025;419026 330644 330644 0 SVGYKPDFVGFEIPDK Unmodified 1796.8985 0.89850163 729 P00492 HPRT1 Hypoxanthine-guanine phosphoribosyltransferase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 81.19 81.33 3 1.9242E-10 93721 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.685 61.051 176950000 0 0 0 0 0 11207000 2626400 7395700 5748600 12359000 12911000 21307000 3973000 15686000 83737000 49962 729 44844 419027;419028;419029;419030;419031;419032;419033;419034;419035;419036 330645;330646;330647;330648;330649;330650;330651;330652;330653;330654;330655;330656 330648 12 SVHAAPNPAPK Unmodified 1087.5774 0.57744226 2708 Q53SF7 COBLL1 Cordon-bleu protein-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 13.261 11.893 2 0.0018868 11008 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 70.256 47.236 42536000 37509000 0 0 0 2862400 0 0 0 2165200 0 0 0 0 0 0 49963 2708 44845 419037;419038;419039 330657;330658;330659;330660 330659 2 SVHEGALK Unmodified 839.45012 0.45011648 334 O43491 EPB41L2 Band 4.1-like protein 2 yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 8.423 5.682 2 0.026254 7532 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 161.68 41.036 45737000 0 23723000 22014000 0 0 0 0 0 0 0 0 0 0 0 0 49964 334 44846 419040;419041 330661 330661 0 SVHELEK Unmodified 840.43413 0.43413207 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching 7.65 3.66 1 3 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 13.483 13.138 2 0.01092 5327 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 150.17 93.655 2511700000 209170000 959260000 864900000 35532000 47756000 49443000 55751000 48185000 48939000 26347000 44330000 30806000 35355000 23225000 32693000 49965 1356 44847 419042;419043;419044;419045;419046;419047;419048;419049;419050;419051;419052;419053;419054;419055;419056;419057;419058 330662;330663;330664;330665;330666;330667;330668;330669;330670;330671 330669 8 SVHFPGQAVGTR Unmodified 1254.6469 0.64691881 2125 Q06210 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 14 1 1 2 1 1 1 1 1 1 2 2 40.41 40.627 2;3 0.0055376 44060 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.297 48.416 199490000 0 0 0 12989000 7607900 20292000 11895000 0 10408000 16511000 15100000 32550000 19021000 17173000 35945000 49966 2125 44848 419059;419060;419061;419062;419063;419064;419065;419066;419067;419068;419069;419070;419071;419072 330672;330673;330674;330675 330673 4 SVHFPGQAVGTRR Unmodified 1410.748 0.74802984 2125 Q06210 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 33.744 33.977 3 0.010799 37385 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 25.322 15.27 10092000 0 0 0 0 0 0 0 0 3255900 0 0 0 6835900 0 0 49967 2125 44849 419073;419074 330676;330677 330677 2 SVHNHLTSAPAK Unmodified 1260.6575 0.65748349 3016 Q6ZU65 UBN2 Ubinuclein-2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 9.1875 9.2958 3 0.02523 7453 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 34.96 22.329 18709000 0 0 0 1464500 1418000 1430300 2288400 0 1533200 1189500 0 3885700 1384100 1313300 2802400 49968 3016 44850 419075;419076;419077;419078;419079;419080;419081;419082;419083;419084 330678 330678 1 SVHSFAADSEELK Unmodified 1418.6678 0.66777341 3923 Q96M96 FGD4 FYVE, RhoGEF and PH domain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 44.629 43.137 3 0.0024058 54538 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 61.989 48.416 33389000 0 13138000 0 0 0 0 0 0 0 0 0 0 10268000 0 9982500 49969 3923 44851 419085;419086;419087 330679;330680 330679 2 SVHSQDPSGDSK Unmodified 1242.5477 0.54765827 3131 Q86T24 ZBTB33 Transcriptional regulator Kaiso yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 5.2826 1.9795 3 0.012032 4164 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 39.267 26.311 126540000 0 126540000 0 0 0 0 0 0 0 0 0 0 0 0 0 49970 3131 44852 419088;419089 330681 330681 1 SVHSSVPLLNSK Unmodified 1266.6932 0.6932003 2231 Q13085 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 2 2 1 52.872 46.707 2;3 1.4733E-10 63971 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 154.84 110.09 339810000 213430000 83701000 42676000 0 0 0 0 0 0 0 0 0 0 0 0 49971 2231 44853 419090;419091;419092;419093;419094 330682;330683;330684;330685;330686;330687;330688 330686 5 SVHTQVNTNTTLPK Unmodified 1538.8053 0.80526994 2724 Q5FWF5 ESCO1 N-acetyltransferase ESCO1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 32.829 33.279 3 0.00069591 35781 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 40.008 31.412 42104000 0 0 0 0 0 0 0 0 0 9568600 14890000 17645000 0 0 0 49972 2724 44854 419095;419096;419097 330689;330690;330691 330691 3 SVHYCPATK Unmodified 1061.4964 0.49641475 1183 P25205 MCM3 DNA replication licensing factor MCM3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.2 3.92 3 2 1 1 1 1 1 15.577 12.292 2 0.02022 15545 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 100.02 79.462 32880000 14256000 7877900 10746000 0 0 0 0 0 0 0 0 0 0 0 0 49973 1183 44855 419098;419099;419100;419101;419102 330692;330693;330694;330695 330694 3 SVIDPVPAPVGDSHVDGAAK Unmodified 1929.9796 0.97960549 2248 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 6.64 3.7 2 3 6 2 3 1 1 2 2 65.827 63.137 2;3 9.8459E-09 77051 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 83.063 77.959 424640000 21971000 232110000 0 0 0 0 0 0 0 7105200 0 0 0 59741000 103710000 49974 2248 44856 419103;419104;419105;419106;419107;419108;419109;419110;419111;419112;419113 330696;330697;330698;330699;330700;330701;330702;330703;330704;330705;330706;330707 330702 12 SVIDTSTIVRK Unmodified 1217.698 0.69795133 371 O43815 STRN Striatin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 47.464 46.174 3 0.00014449 63366 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.79 92.581 188550000 40671000 8473100 8272800 6836700 5333500 13239000 7107800 10048000 10648000 10078000 14206000 16319000 11462000 9537500 16322000 49975 371 44857 419114;419115;419116;419117;419118;419119;419120;419121;419122;419123;419124;419125;419126;419127;419128;419129 330708;330709;330710;330711;330712;330713;330714;330715;330716;330717;330718;330719;330720;330721;330722;330723;330724;330725 330717 18 SVIDYQTHFR Unmodified 1264.62 0.62003536 5150 Q9Y3B3 TMED7 Transmembrane emp24 domain-containing protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 2 1 1 1 2 1 1 50.186 50.386 2;3 0.0002335 56706 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 119.68 102.31 304840000 0 0 0 0 18558000 0 33401000 40392000 0 26219000 44008000 0 54916000 47989000 39358000 49976 5150 44858 419130;419131;419132;419133;419134;419135;419136;419137;419138;419139;419140;419141 330726;330727;330728;330729;330730;330731;330732;330733;330734;330735;330736;330737;330738;330739 330733 14 SVIELSRQGK Unmodified 1115.6299 0.62987176 4471 Q9H9E3 COG4 Conserved oligomeric Golgi complex subunit 4 yes yes 0 0 1 By MS/MS 2 0 1 1 38.208 31.71 2 0.015183 44086 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.2 69.376 29727000 29727000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49977 4471 44859 419142 330740 330740 1 SVIEQGGIQTVDQLIK Unmodified 1726.9465 0.94651445 3549 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 83.648 83.745 2 2.3185E-23 97025 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 134.99 115.86 86310000 0 0 0 0 2654700 9735300 3970900 4983400 0 13746000 8049200 9526400 5599100 7621700 20423000 49978 3549 44860 419143;419144;419145;419146;419147;419148;419149;419150;419151;419152 330741;330742;330743;330744;330745;330746;330747;330748;330749 330744 9 SVIFEPDSISQPIIK Unmodified 1671.9083 0.90833803 3646 Q92636 NSMAF Protein FAN yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 88.252 84.208 2 0.00043183 104773 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.74 105.59 95151000 0 95151000 0 0 0 0 0 0 0 0 0 0 0 0 0 49979 3646 44861 419153;419154 330750;330751;330752 330750 2 SVIGTPEFMAPEMYEEK 2 Oxidation (M) 1988.8747 0.874731 4393 Q9H4A3;Q96J92 WNK1;WNK4 Serine/threonine-protein kinase WNK1;Serine/threonine-protein kinase WNK4 yes no 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.29 74.35 2 2.9748E-07 85642 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 82.774 75.05 142230000 0 0 0 6667700 9398200 9703300 11911000 12114000 14607000 13929000 11036000 16210000 15596000 10401000 10660000 49980 4393 44862 419155;419156;419157;419158;419159;419160;419161;419162;419163;419164;419165;419166 330753;330754;330755;330756;330757;330758;330759;330760;330761;330762;330763;330764 330758 5858;5859 12 SVIGTPEFMAPEMYEEK Oxidation (M) 1972.8798 0.87981637 4393 Q9H4A3;Q96J92 WNK1;WNK4 Serine/threonine-protein kinase WNK1;Serine/threonine-protein kinase WNK4 yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.87 3.54 4 11 3 1 1 1 1 1 1 1 1 1 1 1 1 80.664 79.629 2;3 6.215E-46 98125 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.18 127.14 349260000 0 257220000 1862500 0 3658200 6043700 3657400 7893600 4948600 8102200 10438000 10932000 7568700 9724400 17218000 49981 4393 44862 419167;419168;419169;419170;419171;419172;419173;419174;419175;419176;419177;419178;419179;419180;419181 330765;330766;330767;330768;330769;330770;330771;330772;330773;330774;330775;330776;330777;330778;330779 330768 5858;5859 14 SVIGTPEFMAPEMYEEK Unmodified 1956.8849 0.88490175 4393 Q9H4A3;Q96J92 WNK1;WNK4 Serine/threonine-protein kinase WNK1;Serine/threonine-protein kinase WNK4 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 6.71 3.81 2 1 4 1 2 1 1 1 1 86.314 84.085 2 7.4039E-46 104779 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 133.98 125.67 286330000 5683300 253270000 0 0 0 0 0 3678600 0 0 0 3049400 0 4861700 15790000 49982 4393 44862 419182;419183;419184;419185;419186;419187;419188 330780;330781;330782;330783;330784;330785 330780 6 SVIIIGAGPAGLAAAR Unmodified 1435.8511 0.85109792 3387 Q8NB78 KDM1B Lysine-specific histone demethylase 1B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 81.155 81.297 2 0.0024528 94108 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 47.844 37.472 12154000 0 0 0 0 0 4094200 3090100 2672900 0 0 2296500 0 0 0 0 49983 3387 44863 419189;419190;419191;419192;419193 330786;330787;330788;330789 330786 4 SVILEAFSSPSEEVK Unmodified 1620.8247 0.82466798 3170 Q86VP6 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.16 3.73 5 2 12 2 3 2 1 1 1 1 1 1 1 1 1 1 1 1 80.79 79.661 2 1.9836E-65 99369 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 188.27 163.23 3461500000 142460000 2398800000 267950000 20966000 20630000 79825000 38569000 29936000 24510000 73758000 59585000 69318000 43775000 52898000 138590000 49984 3170 44864 419194;419195;419196;419197;419198;419199;419200;419201;419202;419203;419204;419205;419206;419207;419208;419209;419210;419211;419212 330790;330791;330792;330793;330794;330795;330796;330797;330798;330799;330800;330801;330802;330803;330804;330805;330806;330807;330808;330809 330793 19 SVILEGDREHSSGAQIPVDLSELK Unmodified 2578.3239 0.32385992 2385 Q14181 POLA2 DNA polymerase alpha subunit B yes yes 0 0 1 By MS/MS 2 0 1 1 85.445 77.315 3 1.8131E-11 100939 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.319 80.861 9071000 9071000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49985 2385 44865 419213 330810 330810 1 SVILPLPQNVK Unmodified 1206.7336 0.73360855 541 O75794 CDC123 Cell division cycle protein 123 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 79.518 78.397 2 0.0061228 90576 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 69.423 63.692 1184600000 374930000 555240000 9357100 13332000 10183000 19075000 15208000 13940000 11551000 22540000 24378000 26370000 14979000 23673000 49885000 49986 541 44866 419214;419215;419216;419217;419218;419219;419220;419221;419222;419223;419224;419225;419226;419227;419228;419229 330811;330812;330813;330814;330815;330816;330817;330818;330819 330811 8 SVIPSDGPSVACVK Unmodified 1414.7126 0.71261511 763 P02787 TF Serotransferrin yes yes 0 0 0 By MS/MS 10 0 1 1 59.385 58.705 2 0.001312 67736 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 59.418 43.538 8415000 0 0 0 8415000 0 0 0 0 0 0 0 0 0 0 0 49987 763 44867 419230 330820 330820 1 SVIQQAEEK Unmodified 1030.5295 0.52948901 4538 Q9NP74 PALMD Palmdelphin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 24.803 22.616 2 0.0067071 30090 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.74 63.166 105740000 0 58964000 4753100 0 0 0 0 0 0 0 0 42021000 0 0 0 49988 4538 44868 419231;419232;419233 330821;330822 330821 2 SVISGGLDALEFIGK Unmodified 1504.8137 0.81370936 4616 Q9NRY5 FAM114A2 Protein FAM114A2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 6.25 3.77 1 1 2 2 1 1 94.951 93.003 2 0.0055034 114986 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.04 31.254 141180000 0 136150000 0 0 0 0 0 0 0 1745700 0 0 0 0 3287200 49989 4616 44869 419234;419235;419236;419237 330823;330824 330823 2 SVISHSVTSDMQTIEQESPIMAK 2 Oxidation (M) 2549.1989 0.19891868 4534 Q9NP61 ARFGAP3 ADP-ribosylation factor GTPase-activating protein 3 yes yes 0 2 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 2 1 1 64.244 64.469 3 4.4028E-12 72271 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 71.309 63.505 40562000 0 0 0 0 0 0 0 4980300 0 8698800 15360000 0 5965600 5558000 0 49990 4534 44870 419238;419239;419240;419241;419242;419243;419244 330825;330826;330827;330828 330827 5952;5953 4 SVIYHALSQK Unmodified 1144.6241 0.6240581 681 O95707 POP4 Ribonuclease P protein subunit p29 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 36.998 36.107 2 6.2201E-05 52224 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 143.7 120.63 42622000 25101000 0 0 0 0 2852300 0 2334100 0 3335300 4007800 0 0 0 4991900 49991 681 44871 419245;419246;419247;419248;419249;419250;419251 330829;330830;330831;330832;330833;330834;330835 330833 7 SVLAETEGILQK Unmodified 1286.7082 0.70818166 3151 Q86UP2 KTN1 Kinectin yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 78.547 74.846 2 0.0020063 90917 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 85.29 63.053 115200000 0 112170000 3032100 0 0 0 0 0 0 0 0 0 0 0 0 49992 3151 44872 419252;419253 330836 330836 1 SVLDDLTSCTTSLR Unmodified 1566.7559 0.75593649 2097;913 Q03468;P0DP91 ERCC6 DNA excision repair protein ERCC-6 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 79.856 79.951 2 1.8863E-21 92498 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 144.65 115.92 139360000 0 0 0 0 7938200 10744000 7016000 0 10318000 14724000 12708000 18563000 13190000 15611000 28552000 49993 2097;913 44873 419254;419255;419256;419257;419258;419259;419260;419261;419262;419263 330837;330838;330839;330840;330841;330842;330843;330844;330845;330846;330847 330838 11 SVLDGPVLSNIDR Unmodified 1383.7358 0.73579339 1607 P49848 TAF6 Transcription initiation factor TFIID subunit 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 77.346 77.248 2 0.0169 89692 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 39.266 30.792 13549000 0 0 0 1997000 0 0 0 0 0 6827200 0 0 4724800 0 0 49994 1607 44874 419264;419265;419266 330848;330849;330850;330851 330850 4 SVLEGGDIPLQGLSGLK Unmodified 1681.9251 0.92505073 4220 Q9BX66 SORBS1 Sorbin and SH3 domain-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 92.018 87.107 2 9.2676E-26 108209 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.56 113.67 40249000 0 40249000 0 0 0 0 0 0 0 0 0 0 0 0 0 49995 4220 44875 419267 330852 330852 1 SVLELIPELNEK Unmodified 1382.7657 0.76569654 1464 P42704 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.08 3.33 2 1 9 1 1 1 1 1 1 1 1 1 1 1 1 89.649 88.598 2 4.0936E-13 108061 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 146.11 128.88 93230000 30566000 14839000 13920000 0 0 3831600 0 1843800 2326200 5020600 3963000 3162400 1038600 2806000 9912200 49996 1464 44876 419268;419269;419270;419271;419272;419273;419274;419275;419276;419277;419278;419279 330853;330854;330855;330856;330857;330858;330859;330860;330861;330862;330863;330864;330865 330862 12 SVLEPQAVPDPEEGSSAPR Unmodified 1963.9487 0.9486993 3154 Q86UT8 CCDC84 Coiled-coil domain-containing protein 84 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 62.821 63.11 2 0.00074979 72010 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 48.659 42.687 23273000 0 0 0 0 0 5544800 3964900 0 0 0 0 8576900 0 0 5185900 49997 3154 44877 419280;419281;419282;419283;419284 330866;330867;330868;330869;330870 330867 4 SVLEQTK Unmodified 803.43888 0.43888309 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 0 0 By MS/MS 10 0 1 1 12.875 13.281 2 0.018785 11686 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 111.28 44.285 33539000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33539000 49998 1337 44878 419285 330871 330871 1 SVLEVRTENLK Unmodified 1286.7194 0.71941505 2251 Q13190 STX5 Syntaxin-5 yes yes 0 0 1 By MS/MS By matching 2 0 2 1 1 52.556 46.544 2 0.0028383 64025 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.97 46.513 36408000 34349000 0 2059600 0 0 0 0 0 0 0 0 0 0 0 0 49999 2251 44879 419286;419287 330872 330872 1 SVLGEADQK Unmodified 945.47673 0.47672516 1578 P49588 AARS Alanine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.22 21.424 2 0.029527 21099 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.548 38.301 359900000 0 0 0 14344000 6745600 27632000 17191000 12298000 10911000 22361000 49041000 47358000 20098000 35628000 96293000 50000 1578 44880 419288;419289;419290;419291;419292;419293;419294;419295;419296;419297;419298;419299 330873;330874 330873 1 SVLGGQDQLR Unmodified 1071.5673 0.5672715 4174 Q9BV38 WDR18 WD repeat-containing protein 18 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.448 38.628 2 0.024368 42992 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 44.98 27.75 231660000 0 0 0 9282100 11773000 12075000 14749000 13424000 11444000 17735000 21574000 27131000 27496000 26225000 38751000 50001 4174 44881 419300;419301;419302;419303;419304;419305;419306;419307;419308;419309;419310;419311 330875;330876;330877;330878 330878 2 SVLGTDTK Unmodified 819.4338 0.43379771 3061 Q7LBC6 KDM3B Lysine-specific demethylase 3B yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 17.029 17.065 2 0.017183 16770 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 66.073 43.451 23138000 0 0 0 0 2492800 6691900 3005700 2908600 4472500 3566500 0 0 0 0 0 50002 3061 44882 419312;419313;419314;419315;419316;419317 330879;330880 330879 2 SVLHEVMEQQTLSIAK Oxidation (M) 1827.94 0.94004887 1332 P33991 MCM4 DNA replication licensing factor MCM4 yes yes 0 1 0 By MS/MS 10 0 1 1 61.508 62.088 3 0.001066 70150 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.312 33.458 6712400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6712400 50003 1332 44883 419318 330881 330881 1998 1 SVLIGEFLEK Unmodified 1133.6332 0.6332258 296 O43148 RNMT mRNA cap guanine-N7 methyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 84.629 83.43 2 0.0059744 106167 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.213 52.923 320160000 143980000 54106000 47281000 2272400 2750700 5187400 2790900 3822300 5703600 0 10667000 11905000 4766300 7367500 17560000 50004 296 44884 419319;419320;419321;419322;419323;419324;419325;419326;419327;419328;419329;419330;419331;419332;419333 330882;330883;330884;330885;330886;330887;330888;330889;330890 330886 9 SVLISLK Unmodified 758.49019 0.49019038 885 P09496 CLTA Clathrin light chain A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 59.693 59.617 2 0.035265 67929 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 70.912 0 102480000 0 0 0 9366300 12939000 16213000 14199000 11265000 8057200 0 0 0 0 30437000 0 50005 885 44885 419334;419335;419336;419337;419338;419339;419340 330891 330891 1 SVLLLAYK Unmodified 905.5586 0.5586043 2608 Q16531 DDB1 DNA damage-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 73.107 73.284 2 0.020537 84451 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 62.717 36.238 50125000 0 0 0 0 0 5829600 0 0 0 4839500 8075700 7941400 3210000 5584700 14644000 50006 2608 44886 419341;419342;419343;419344;419345;419346;419347 330892;330893;330894;330895;330896;330897;330898 330895 7 SVLLLAYKPMEGNFEEIAR Oxidation (M) 2195.1296 0.12964055 2608 Q16531 DDB1 DNA damage-binding protein 1 yes yes 0 1 1 By MS/MS 10 0 1 1 83.4 83.59 3 0.00040796 96426 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.704 37.517 7353200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7353200 50007 2608 44887 419348 330899 330899 4258 1 SVLLQGEAGR Unmodified 1028.5615 0.56145784 3315 Q8N201 INTS1 Integrator complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.885 37.067 2 0.041619 40380 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 39.547 22.161 109520000 0 0 0 6093800 6029500 7977000 7725400 7088800 6251000 12586000 9079100 12584000 11930000 8036600 14137000 50008 3315 44888 419349;419350;419351;419352;419353;419354;419355;419356;419357;419358;419359;419360 330900;330901 330901 2 SVLNEFDAIQK Unmodified 1262.6507 0.65066678 2426 Q14674 ESPL1 Separin yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 74.886 74.85 2 0.015911 85953 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 73.233 55.607 18075000 0 0 0 1737300 2381900 0 0 0 0 3379700 0 4007500 0 0 6569000 50009 2426 44889 419361;419362;419363;419364;419365;419366 330902;330903;330904 330903 3 SVLNNQLLEMK Unmodified 1287.6857 0.68567208 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 74.982 74.934 2 0.00045232 86155 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.817 59.258 25538000 0 0 0 1341100 1340700 0 0 0 0 0 0 8516300 1258300 0 13082000 50010 1286 44890 419367;419368;419369;419370;419371 330905;330906;330907 330906 3 SVLPTAIPAVLPAASPCSSPK Unmodified 2062.1133 0.1132622 587 O94806 PRKD3 Serine/threonine-protein kinase D3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 21 1 2 2 2 2 1 2 2 2 2 2 1 87.749 87.83 2;3 0.00032364 101888 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 58.752 55.434 71358000 0 0 0 1243900 6349000 5494300 3848100 6311800 2494800 8701100 8111300 9099100 6995300 6582100 6127200 50011 587 44891 419372;419373;419374;419375;419376;419377;419378;419379;419380;419381;419382;419383;419384;419385;419386;419387;419388;419389;419390;419391;419392 330908;330909;330910;330911;330912;330913;330914;330915;330916;330917;330918;330919;330920;330921;330922 330910 15 SVLQEDAEK Unmodified 1017.4979 0.49785453 2510 Q15276 RABEP1 Rab GTPase-binding effector protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 21.519 21.061 2 0.0052023 21646 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 80.438 52.331 114930000 0 74127000 0 2239800 1361800 3273100 2640200 3282000 1844200 3641000 6038300 6173100 3688200 0 6620600 50012 2510 44892 419393;419394;419395;419396;419397;419398;419399;419400;419401;419402;419403;419404;419405 330923;330924;330925;330926;330927;330928;330929;330930 330927 8 SVLQGLLK Unmodified 856.5382 0.53820321 3440 Q8NF64 ZMIZ2 Zinc finger MIZ domain-containing protein 2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 72.825 72.867 2 0.034341 83053 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.163 26.991 62050000 0 0 0 3365500 2294500 6003500 4036900 5286700 0 7945300 0 8986300 7983100 5914100 10234000 50013 3440 44893 419406;419407;419408;419409;419410;419411;419412;419413;419414;419415 330931;330932;330933 330932 3 SVLQPSQQK Unmodified 1013.5506 0.55055881 5094 Q9Y2A7 NCKAP1 Nck-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 17.115 17.271 2 0.0044372 17140 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 86.833 49.105 38126000 0 0 0 0 4981800 0 0 5337300 4495200 7873900 0 15437000 0 0 0 50014 5094 44894 419416;419417;419418;419419;419420;419421;419422;419423;419424 330934;330935;330936;330937;330938;330939;330940;330941 330934 8 SVLRPAVLQAPQPK Unmodified 1502.8933 0.89329709 4428 Q9H6Z4 RANBP3 Ran-binding protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 57.872 57.989 3 2.7198E-08 65438 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 74.475 72.922 347180000 0 0 0 17264000 12597000 34534000 27990000 22819000 12846000 27344000 37612000 37253000 27445000 28245000 61235000 50015 4428 44895 419425;419426;419427;419428;419429;419430;419431;419432;419433;419434;419435;419436 330942;330943;330944;330945;330946;330947;330948;330949;330950;330951;330952;330953;330954;330955;330956 330952 14 SVLSEGHQR Unmodified 1011.5098 0.50975662 575 O76071 CIAO1 Probable cytosolic iron-sulfur protein assembly protein CIAO1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 10.679 10.783 2 0.0050805 9436 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 84.227 60.37 87782000 0 0 0 7193100 6472500 10085000 8546000 6953100 5116700 11505000 0 9575400 16667000 0 5668100 50016 575 44896 419437;419438;419439;419440;419441;419442;419443;419444;419445;419446 330957;330958;330959;330960;330961;330962;330963;330964;330965;330966 330965 10 SVLSTSRNLSNNCDTGEK Unmodified 1980.9171 0.91708159 3617 Q92540 SMG7 Protein SMG7 yes yes 0 0 1 By MS/MS 2 0 1 1 40 33.377 3 0.032067 46330 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 28.166 18.636 5687600 5687600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50017 3617 44897 419447 330967 330967 1 SVLTGGLDALEFIGK Unmodified 1518.8294 0.82935943 3239 Q8IWE2 FAM114A1 Protein NOXP20 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.25 3.34 2 1 1 1 2 1 97.126 93.12 2 0.00052175 116366 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.191 86.634 69695000 18732000 48821000 0 0 0 0 0 0 0 0 0 0 0 0 2142000 50018 3239 44898 419448;419449;419450;419451 330968;330969;330970 330970 3 SVLTPLRGDVASCNTQVAEK Unmodified 2144.0896 0.089566649 464 O75152 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 59.588 59.066 3 1.8885E-28 66911 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 103.41 92.544 192130000 14651000 0 0 0 24082000 19780000 9567100 10625000 15701000 15406000 16617000 16180000 14615000 13620000 21290000 50019 464 44899 419452;419453;419454;419455;419456;419457;419458;419459;419460;419461;419462;419463 330971;330972;330973;330974;330975;330976;330977;330978;330979;330980;330981;330982 330981 12 SVLVPHGSK Unmodified 922.52362 0.52361577 2101 Q04446 GBE1 1,4-alpha-glucan-branching enzyme yes yes 0 0 0 By matching By MS/MS By matching By MS/MS 6 4 2 2 1 1 1 1 20.217 18.167 2 0.028492 24896 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.897 40.935 439500000 402710000 30287000 0 0 0 0 0 0 0 0 0 0 0 1509700 4999900 50020 2101 44900 419464;419465;419466;419467 330983;330984;330985 330983 3 SVLVSAGNVK Unmodified 972.5604 0.56039521 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 2 1 1 1 1 1 1 1 38.453 37.014 2 0.0021066 41228 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 86.332 37.235 1543600000 292910000 926120000 12666000 26409000 28139000 42216000 27758000 39706000 27694000 0 39553000 0 42106000 38325000 0 50021 2392 44901 419468;419469;419470;419471;419472;419473;419474;419475;419476;419477;419478;419479;419480;419481 330986;330987;330988;330989;330990;330991;330992;330993;330994;330995;330996;330997 330986 4 SVLVSVSEVK Unmodified 1045.6019 0.60192568 646 O95361 TRIM16 Tripartite motif-containing protein 16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 7.44 3.62 2 1 6 2 1 1 1 1 1 1 1 58.44 56.806 2 0.017706 70289 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 66.27 26.002 126370000 0 94260000 6656000 2681200 3123200 4311800 4773700 0 0 0 0 0 0 3805000 6759000 50022 646 44902 419482;419483;419484;419485;419486;419487;419488;419489;419490 330998;330999;331000;331001;331002;331003 331000 5 SVMDATQIAGLNCLR Oxidation (M) 1663.8022 0.80217518 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 73.48 73.807 2 0.00040454 84901 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 63.073 51.861 22395000 0 0 0 0 0 0 0 0 0 0 0 9939700 0 0 12455000 50023 1337 44903 419491;419492 331004;331005 331005 2023 2 SVMDATQIAGLNCLR Unmodified 1647.8073 0.80726055 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 80.893 81.052 2 2.3969E-15 93415 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 104.43 89.873 18956000 0 0 0 0 0 0 0 0 0 0 0 2974000 0 1757600 14224000 50024 1337 44903 419493;419494;419495 331006 331006 1 SVMEELK Oxidation (M) 850.41062 0.41061943 3734;1846 Q96A72;P61326 MAGOHB;MAGOH Protein mago nashi homolog 2;Protein mago nashi homolog no no 0 1 0 By MS/MS By MS/MS 2 0 3 2 1 19.588 17.46 2 0.023751 22956 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.602 40.138 251520000 0 242840000 8680900 0 0 0 0 0 0 0 0 0 0 0 0 50025 3734;1846 44904 419496;419497;419498 331007;331008 331007 2 SVMEELK Unmodified 834.4157 0.41570481 3734;1846 Q96A72;P61326 MAGOHB;MAGOH Protein mago nashi homolog 2;Protein mago nashi homolog no no 0 0 0 By matching By MS/MS By MS/MS 2 0 3 1 1 1 42.314 37.13 2 0.039422 48856 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.297 34.251 1597300000 28287000 1555200000 13792000 0 0 0 0 0 0 0 0 0 0 0 0 50026 3734;1846 44904 419499;419500;419501 331009 331009 1 SVMIDEDMTAR Oxidation (M) 1282.5533 0.55333728 2284 Q13418 ILK Integrin-linked protein kinase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 2 1 1 1 1 2 1 42.512 42.731 2 0.0014365 49966 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.893 57.382 63185000 0 0 0 0 2715800 6908500 9206300 0 4391000 8064900 8973700 9251800 0 5707200 7966200 50027 2284 44905 419502;419503;419504;419505;419506;419507;419508;419509;419510;419511;419512 331010;331011;331012;331013;331014;331015;331016;331017;331018 331013 3722;3723 8 SVMIDEDMTAR Unmodified 1266.5584 0.55842266 2284 Q13418 ILK Integrin-linked protein kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 52.207 52.422 2 0.0012328 59444 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 74.162 64.948 87714000 0 0 0 0 4294800 7914000 4148900 5587900 3783200 10598000 8006200 9932300 7059800 7451400 18938000 50028 2284 44905 419513;419514;419515;419516;419517;419518;419519;419520;419521;419522;419523 331019;331020;331021;331022;331023;331024;331025 331020 7 SVMIDEDMTAR 2 Oxidation (M) 1298.5483 0.5482519 2284 Q13418 ILK Integrin-linked protein kinase yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 28.216 28.412 2 0.003851 30555 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 48.091 44.835 17079000 0 0 0 0 0 0 3771600 0 3075000 5236600 4996000 0 0 0 0 50029 2284 44905 419524;419525;419526;419527 331026 331026 3722;3723 1 SVMIGTALNTSEMK Oxidation (M) 1496.7215 0.72146524 1739 P54278 PMS2 Mismatch repair endonuclease PMS2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 63.963 58.055 2 0.0017471 74185 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.44 61.06 38030000 0 38030000 0 0 0 0 0 0 0 0 0 0 0 0 0 50030 1739 44906 419528;419529;419530 331027;331028;331029 331028 2819;2820 3 SVMIGTALNTSEMK 2 Oxidation (M) 1512.7164 0.71637986 1739 P54278 PMS2 Mismatch repair endonuclease PMS2 yes yes 0 2 0 By MS/MS 2.5 0.5 1 1 2 55.141 49.794 2 1.455E-05 64255 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.88 90.049 25028000 0 25028000 0 0 0 0 0 0 0 0 0 0 0 0 0 50031 1739 44906 419531;419532 331030 331030 2819;2820 1 SVMIGTALNTSEMK Unmodified 1480.7266 0.72655062 1739 P54278 PMS2 Mismatch repair endonuclease PMS2 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 69.81 69.995 2 0.0015506 80475 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 57.348 46.825 8592900 0 0 0 0 0 0 0 4913400 0 0 0 0 0 3679500 0 50032 1739 44906 419533;419534 331031 331031 1 SVMLYAAEMIPK 2 Oxidation (M) 1383.6778 0.67780951 878 P09132 SRP19 Signal recognition particle 19 kDa protein yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.67 3.74 2 2 5 2 1 1 1 1 1 1 1 69.542 67.114 2 0.0019105 77526 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 52.79 32.46 53835000 19196000 1853600 8022300 3056300 4096700 0 0 0 4461900 0 7480000 0 5668100 0 0 50033 878 44907 419535;419536;419537;419538;419539;419540;419541;419542;419543 331032;331033;331034;331035;331036;331037;331038 331036 1131;1132 7 SVMLYAAEMIPK Unmodified 1351.688 0.68798027 878 P09132 SRP19 Signal recognition particle 19 kDa protein yes yes 0 0 0 By MS/MS 2 0 1 1 92.627 84.496 2 0.0029288 109546 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.17 66.184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50034 878 44907 419544 331039 331039 1 SVMLYAAEMIPK Oxidation (M) 1367.6829 0.68289489 878 P09132 SRP19 Signal recognition particle 19 kDa protein yes yes 0 1 0 By matching By MS/MS 2 0 3 1 2 83.721 80.119 2 0.034 97021 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 46.819 29.981 30149000 0 25883000 4265500 0 0 0 0 0 0 0 0 0 0 0 0 50035 878 44907 419545;419546;419547 331040;331041 331040 1131;1132 2 SVMNTAGNSAPSLFLK Oxidation (M) 1651.824 0.82395647 4467 Q9H9A5 CNOT10 CCR4-NOT transcription complex subunit 10 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 72.001 71.445 2 8.9273E-21 82405 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 113.77 96.4 86057000 7644200 0 0 0 7074100 6439500 7164700 6146000 5166900 8713500 8994400 9548100 6427200 5231800 7506400 50036 4467 44908 419548;419549;419550;419551;419552;419553;419554;419555;419556;419557;419558;419559 331042;331043;331044;331045;331046;331047;331048;331049;331050;331051;331052;331053;331054 331043 5902 13 SVMNTAGNSAPSLFLK Unmodified 1635.829 0.82904185 4467 Q9H9A5 CNOT10 CCR4-NOT transcription complex subunit 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 78.864 78.292 2 1.6864E-06 90710 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 107.09 94.875 135910000 18826000 0 0 7079400 4834600 9032100 3565100 10076000 4857200 10400000 10743000 12536000 9165100 9040900 25756000 50037 4467 44908 419560;419561;419562;419563;419564;419565;419566;419567;419568;419569;419570;419571;419572 331055;331056;331057;331058;331059;331060;331061;331062;331063;331064;331065;331066 331064 11 SVMSGDQLREDR Unmodified 1391.6463 0.64632646 2463 Q14C86 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 29.01 29.248 3 1.7719E-05 31766 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 94.767 89.552 216360000 0 0 0 0 10832000 15026000 13908000 10623000 13643000 19425000 25933000 32448000 19910000 20273000 34335000 50038 2463 44909 419573;419574;419575;419576;419577;419578;419579;419580;419581;419582;419583 331067;331068;331069;331070;331071;331072;331073;331074;331075;331076;331077;331078;331079 331068 12 SVMTEEYK Oxidation (M) 1001.4376 0.43756246 3737 Q96AE4 FUBP1 Far upstream element-binding protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14.034 13.445 2 0.0087253 12238 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 72.789 56.234 444160000 8960100 199440000 7332400 14366000 14807000 14444000 17218000 17344000 16911000 25316000 29191000 27328000 24645000 26861000 0 50039 3737 44910 419584;419585;419586;419587;419588;419589;419590;419591;419592;419593;419594;419595;419596;419597;419598 331080;331081;331082;331083;331084;331085;331086;331087;331088;331089;331090;331091;331092;331093;331094 331090 5316 15 SVMTEEYK Unmodified 985.44265 0.44264784 3737 Q96AE4 FUBP1 Far upstream element-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 25.985 26.186 2 0.012197 26470 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.189 52.17 551160000 0 0 0 23337000 25521000 30310000 28427000 29163000 31722000 41713000 58258000 71527000 45676000 54175000 111330000 50040 3737 44910 419599;419600;419601;419602;419603;419604;419605;419606;419607;419608;419609;419610 331095;331096;331097;331098;331099;331100;331101;331102 331097 7 SVNDQPSGNLPFLKPDDIQYFDK Unmodified 2636.2758 0.27584709 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.21 3.75 4 1 9 2 2 1 1 1 1 1 1 1 1 1 1 88.724 87.446 3 7.3146E-15 109479 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.659 80.207 298180000 35562000 138320000 15301000 1717600 0 0 0 5894400 5360400 16869000 10020000 6628600 2250300 4666000 55591000 50041 516 44911 419611;419612;419613;419614;419615;419616;419617;419618;419619;419620;419621;419622;419623;419624 331103;331104;331105;331106;331107;331108;331109;331110;331111;331112;331113 331104 11 SVNEGAYIR Unmodified 1007.5036 0.50360861 674 O95625 ZBTB11 Zinc finger and BTB domain-containing protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 31.21 31.389 2 0.021923 34175 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 51.854 33.869 32198000 0 0 0 0 2964200 4162600 0 2314900 0 4653200 0 0 5990700 5467800 6644700 50042 674 44912 419625;419626;419627;419628;419629;419630;419631 331114;331115 331114 2 SVNELIYK Unmodified 964.52295 0.52294707 1072 P18124 RPL7 60S ribosomal protein L7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 2 1 1 1 1 47.467 47.651 2 0.011906 53536 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 75.854 39.974 680270000 0 0 0 30665000 36691000 42493000 36278000 38120000 33807000 58991000 68955000 87708000 71525000 79759000 95278000 50043 1072 44913 419632;419633;419634;419635;419636;419637;419638;419639;419640;419641;419642;419643;419644 331116;331117;331118;331119;331120;331121;331122;331123;331124 331121 9 SVNESLNNLFITEEDYQALR Unmodified 2354.139 0.13901926 2040 Q00610 CLTC Clathrin heavy chain 1 yes yes 0 0 0 By MS/MS 10 0 1 1 89.821 89.96 3 0.032376 104151 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 22.902 18.098 2067700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2067700 50044 2040 44914 419645 331125 331125 1 SVNFDMTSK Oxidation (M) 1043.4594 0.45936054 3549 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.6 3.67 3 7 1 1 1 1 1 1 1 1 1 1 24.613 23.596 2 0.019664 30549 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.879 60.291 86463000 5570800 50701000 1447200 0 0 0 3100400 0 0 4662700 4097200 4815500 4650700 2635000 4782200 50045 3549 44915 419646;419647;419648;419649;419650;419651;419652;419653;419654;419655 331126;331127 331127 5046 2 SVNFDMTSK Unmodified 1027.4644 0.46444592 3549 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 42.636 42.768 2 0.0095982 48402 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 66.27 49.03 119590000 0 0 0 10883000 7209300 0 11147000 10046000 7149200 14016000 17088000 0 9728800 10202000 22119000 50046 3549 44915 419656;419657;419658;419659;419660;419661;419662;419663;419664;419665 331128;331129;331130;331131;331132;331133;331134;331135;331136;331137 331137 10 SVNGSVAEEAPCK Unmodified 1346.6136 0.61362935 2068 Q02040 AKAP17A A-kinase anchor protein 17A yes yes 0 0 0 By MS/MS 10 0 1 1 26.178 26.504 2 0.024198 27246 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 36.585 16.256 993940 0 0 0 0 0 0 0 0 0 0 0 0 0 993940 0 50047 2068 44916 419666 331138 331138 1 SVNLDQWTAEQIQCMQDMGNTK Unmodified 2596.1356 0.13560692 3280 Q8IYB5 SMAP1 Stromal membrane-associated protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 93.663 88.767 3 0.00072777 110179 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 50.432 46.232 17045000 0 17045000 0 0 0 0 0 0 0 0 0 0 0 0 0 50048 3280 44917 419667 331139 331139 1 SVNLLVVK Unmodified 870.55385 0.55385327 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.537 64.627 2 0.020537 73336 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 62.717 25.072 210470000 0 0 0 11090000 12196000 13894000 11771000 16174000 9540200 22460000 20541000 26469000 20935000 17406000 27990000 50049 2361 44918 419668;419669;419670;419671;419672;419673;419674;419675;419676;419677;419678;419679 331140;331141;331142 331141 3 SVNSAGLHTVQR Unmodified 1267.6633 0.66329715 3521 Q8TEW0 PARD3 Partitioning defective 3 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 21.314 21.437 3 0.00046584 22381 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 63.727 48.851 105800000 0 0 0 10369000 11510000 13875000 17024000 0 10705000 12930000 12009000 17375000 0 0 0 50050 3521 44919 419680;419681;419682;419683;419684;419685;419686;419687 331143;331144;331145;331146;331147;331148;331149 331145 7 SVNSSTMVAQQK Unmodified 1278.6238 0.6238001 2596 Q16181 SEPT7 Septin-7 yes yes 0 0 0 By MS/MS 10 0 1 1 20.274 20.785 2 5.149E-08 21137 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 118.71 86.357 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50051 2596 44920 419688 331150 331150 1 SVNTRLEK Unmodified 945.52434 0.52434406 455 O75116 ROCK2 Rho-associated protein kinase 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 13.473 10.264 2 0.027232 13298 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 131.06 41.919 513740000 487090000 13976000 12672000 0 0 0 0 0 0 0 0 0 0 0 0 50052 455 44921 419689;419690;419691 331151 331151 0 SVNVNRSVSDQFYRYK Acetyl (Protein N-term) 2002.9861 0.98608786 1751 P55010 EIF5 Eukaryotic translation initiation factor 5 yes yes 1 0 2 By MS/MS 2 0 1 1 73.622 65.426 3 0.00098863 86689 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.811 38.672 10567000 10567000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50053 1751 44922 419692 331152 331152 1 SVPADLSRPK Unmodified 1068.5928 0.59275797 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 30.292 25.877 2 0.0077632 34651 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.95 69.304 561310000 224400000 218860000 118040000 0 0 0 0 0 0 0 0 0 0 0 0 50054 1226 44923 419693;419694;419695;419696 331153;331154;331155;331156 331153 3 SVPAFIDISEEDQAAELR Acetyl (Protein N-term) 2030.9797 0.97966507 3046 Q7L2H7 EIF3M Eukaryotic translation initiation factor 3 subunit M yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.43 2.06 1 13 1 1 1 1 1 1 2 1 1 1 1 2 95.273 95.035 2;3 5.2661E-30 110518 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 143.98 132.76 106310000 0 22586000 0 0 4987900 2749700 3149400 2891200 2775900 22117000 11065000 11798000 1813000 4799300 15581000 50055 3046 44924 419697;419698;419699;419700;419701;419702;419703;419704;419705;419706;419707;419708;419709;419710 331157;331158;331159;331160;331161;331162;331163;331164;331165;331166;331167;331168;331169;331170;331171 331164 15 SVPAFIDISEEDQAAELRAYLK Acetyl (Protein N-term) 2506.2591 0.2591344 3046 Q7L2H7 EIF3M Eukaryotic translation initiation factor 3 subunit M yes yes 1 0 1 By MS/MS By MS/MS 2.25 0.433 3 1 3 1 99.056 95.248 2;3 1.868E-130 117445 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 226.65 213.81 194050000 0 159160000 34883000 0 0 0 0 0 0 0 0 0 0 0 0 50056 3046 44925 419711;419712;419713;419714 331172;331173;331174;331175;331176 331173 5 SVPASNAIAYK Unmodified 1119.5924 0.59242362 2830 Q5VZ89 DENND4C DENN domain-containing protein 4C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 39.15 38.92 2 0.0010566 43349 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 75.378 61.799 276150000 0 84954000 0 9651200 13655000 13087000 13823000 15783000 12007000 16594000 19649000 24538000 18060000 14733000 19615000 50057 2830 44926 419715;419716;419717;419718;419719;419720;419721;419722;419723;419724;419725;419726;419727 331177;331178;331179;331180;331181;331182;331183;331184;331185;331186;331187;331188 331186 7 SVPDEIILLR Unmodified 1153.6707 0.67067394 4468 Q9H9A6 LRRC40 Leucine-rich repeat-containing protein 40 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.576 82.638 2 0.0028003 95584 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 92.439 59.599 825210000 0 0 0 22848000 30442000 68398000 46905000 50954000 46714000 80462000 72707000 101500000 71341000 74277000 158660000 50058 4468 44927 419728;419729;419730;419731;419732;419733;419734;419735;419736;419737;419738;419739 331189;331190;331191;331192;331193;331194;331195;331196;331197;331198;331199;331200 331189 12 SVPENLLK Unmodified 898.51238 0.51238239 2244 Q13155 AIMP2 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 52.165 50.105 2 0.013529 56919 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 72.138 41.526 857040000 0 807190000 0 0 25072000 0 0 0 0 24781000 0 0 0 0 0 50059 2244 44928 419740;419741;419742 331201;331202;331203;331204;331205 331205 5 SVPGTTSSPLVGDISPK Unmodified 1640.8621 0.86211612 5073 Q9UQR0 SCML2 Sex comb on midleg-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.347 69.423 2 1.2376E-07 79644 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 80.522 66.616 113190000 0 0 0 5741800 6499700 8126800 8041100 5786000 6387100 10247000 12547000 14265000 11498000 11544000 12505000 50060 5073 44929 419743;419744;419745;419746;419747;419748;419749;419750;419751;419752;419753;419754 331206;331207;331208;331209;331210;331211;331212;331213;331214;331215;331216;331217;331218 331212 11 SVPHYAAIEPDGNGLMIVSYK Oxidation (M) 2276.1147 0.11471877 3975 Q96RS6 NUDCD1 NudC domain-containing protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS 6.71 3.81 2 1 4 1 1 1 1 1 1 1 79.768 77.869 3 5.1874E-11 98672 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 92.492 85.046 193250000 128320000 6124000 31483000 0 0 0 0 4080100 0 5190100 0 0 0 4622900 13426000 50061 3975 44930 419755;419756;419757;419758;419759;419760;419761 331219;331220;331221;331222 331221 5462 3 SVPHYAAIEPDGNGLMIVSYK Unmodified 2260.1198 0.11980414 3975 Q96RS6 NUDCD1 NudC domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 85.901 80.614 3 0.00015556 103102 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 59.122 54.03 77819000 72127000 0 5691500 0 0 0 0 0 0 0 0 0 0 0 0 50062 3975 44930 419762;419763 331223;331224 331223 2 SVPLATAPMAEQR Unmodified 1369.7024 0.70238478 5267 Q9Y678 COPG1 Coatomer subunit gamma-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 55.304 55.39 2 0.002182 61831 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 59.84 49.886 226260000 0 0 0 10333000 10687000 25040000 14398000 16889000 9873700 22051000 28602000 0 15522000 24979000 47890000 50063 5267 44931 419764;419765;419766;419767;419768;419769;419770;419771;419772;419773;419774 331225;331226;331227;331228;331229;331230;331231 331228 7 SVPLATAPMAEQR Oxidation (M) 1385.6973 0.6972994 5267 Q9Y678 COPG1 Coatomer subunit gamma-1 yes yes 0 1 0 By MS/MS 10 0 1 1 42.319 43.062 2 0.0061954 47145 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.466 38.311 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50064 5267 44931 419775 331232 331232 6671 1 SVPLATAPMAEQRTESTPITAVK Oxidation (M) 2413.2523 0.25227488 5267 Q9Y678 COPG1 Coatomer subunit gamma-1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2 0 4 1 1 2 70.129 64.764 3 7.9255E-07 82781 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.088 64.088 484630000 40937000 334690000 109010000 0 0 0 0 0 0 0 0 0 0 0 0 50065 5267 44932 419776;419777;419778;419779 331233;331234;331235 331233 6671 3 SVPLATAPMAEQRTESTPITAVK Unmodified 2397.2574 0.25736026 5267 Q9Y678 COPG1 Coatomer subunit gamma-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 76.811 71.984 3 2.1544E-23 88175 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 103.24 98.935 1136100000 87773000 934680000 113690000 0 0 0 0 0 0 0 0 0 0 0 0 50066 5267 44932 419780;419781;419782;419783 331236;331237;331238;331239;331240 331240 5 SVPLPTLK Unmodified 853.5273 0.52730417 592 O94842 TOX4 TOX high mobility group box family member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.697 62.792 2 0.027721 71612 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 57.177 32.179 587550000 0 0 0 45604000 26200000 32163000 49609000 44476000 38457000 50308000 57923000 60896000 63856000 55384000 62677000 50067 592 44933 419784;419785;419786;419787;419788;419789;419790;419791;419792;419793;419794;419795 331241;331242;331243 331243 3 SVPLSEPVTMDK Unmodified 1301.6537 0.65370325 393 O60306 AQR Intron-binding protein aquarius yes yes 0 0 0 By MS/MS 2 0 1 1 62.795 56.902 2 0.0093905 73022 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.817 61.049 116940000 0 116940000 0 0 0 0 0 0 0 0 0 0 0 0 0 50068 393 44934 419796 331244 331244 1 SVPMPLSNISVPK Unmodified 1367.7483 0.74827234 3171 Q86VQ1 GLCCI1 Glucocorticoid-induced transcript 1 protein yes yes 0 0 0 By MS/MS 10 0 1 1 81.004 81.219 2 0.027402 93600 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.352 41.039 12902000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12902000 50069 3171 44935 419797 331245 331245 1 SVPNQPSTNEILQAVLK Unmodified 1836.9945 0.99452728 2828 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 89.854 89.38 2 5.9819E-13 111533 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.14 100.88 482130000 0 416770000 2476400 0 2151800 3853900 2293300 4098300 3402700 9524100 6310400 7924200 1920700 5409300 15994000 50070 2828 44936 419798;419799;419800;419801;419802;419803;419804;419805;419806;419807;419808;419809;419810 331246;331247 331246 1 SVPNTPLRPNQQSVVNSSFSELFVK Unmodified 2773.4399 0.43989273 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 1 By MS/MS 10 0 1 1 85.682 85.851 3 6.0609E-06 99195 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.106 29.552 9590900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9590900 50071 2556 44937 419811 331248 331248 1 SVPSALMK Acetyl (Protein N-term) 873.46299 0.46298935 1756 P55081 MFAP1 Microfibrillar-associated protein 1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 67.371 67.42 2 0.02503 77105 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 41.188 18.259 33677000 0 0 0 3899200 4224600 0 0 0 0 4670100 4771400 6481200 3787600 0 5842800 50072 1756 44938 419812;419813;419814;419815;419816;419817;419818 331249 331249 1 SVPSIHVPSPAVPK Unmodified 1413.798 0.79799972 3877 Q96II8 LRCH3 Leucine-rich repeat and calponin homology domain-containing protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 67.17 67.385 3 0.032856 76928 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 29.355 22.451 46799000 0 0 0 0 0 7663200 6046300 4992300 3459700 9004000 0 6862200 0 0 8771300 50073 3877 44939 419819;419820;419821;419822;419823;419824;419825 331250 331250 1 SVPTPLVMAQK Oxidation (M) 1185.6427 0.64274463 3186 Q86WR7 PROSER2 Proline and serine-rich protein 2 yes yes 0 1 0 By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 48.772 48.846 2 0.0039705 55282 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 57.59 45.996 111950000 0 0 0 11470000 9545600 10808000 13385000 9315300 8502700 13216000 0 0 10929000 7927900 16850000 50074 3186 44940 419826;419827;419828;419829;419830;419831;419832;419833;419834;419835 331251;331252;331253;331254 331251 4814 4 SVPTPLVMAQK Unmodified 1169.6478 0.64783001 3186 Q86WR7 PROSER2 Proline and serine-rich protein 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.982 64.073 2 0.0068368 73450 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 55.549 48.49 136660000 0 0 0 6343700 8958800 12397000 10386000 9339300 6606400 13128000 14752000 13741000 10620000 11139000 19244000 50075 3186 44940 419836;419837;419838;419839;419840;419841;419842;419843;419844;419845;419846;419847 331255;331256;331257;331258;331259;331260;331261;331262;331263;331264;331265;331266 331264 11 SVPTSTVFYPSDGVATEK Unmodified 1883.9153 0.9152739 1249 P29401 TKT Transketolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.81 2.8 3 1 22 2 2 2 2 1 2 2 1 2 2 2 2 2 2 71.162 70.678 2;3 1.66E-29 80868 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 112.72 98.565 4430200000 881060 1970500000 0 37976000 24561000 27518000 28950000 42289000 16478000 37632000 439010000 365340000 36298000 287850000 1114900000 50076 1249 44941 419848;419849;419850;419851;419852;419853;419854;419855;419856;419857;419858;419859;419860;419861;419862;419863;419864;419865;419866;419867;419868;419869;419870;419871;419872;419873 331267;331268;331269;331270;331271;331272;331273;331274;331275;331276;331277;331278;331279;331280;331281;331282 331273 16 SVPTTQCLDNSK Unmodified 1348.6293 0.62927941 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 29.603 29.812 2 0.0028636 31920 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 61.958 47.751 104120000 0 0 0 7091500 6746000 0 8705100 7238200 5426800 9084500 10005000 12941000 12907000 10992000 12979000 50077 1492 44942 419874;419875;419876;419877;419878;419879;419880;419881;419882;419883;419884 331283;331284;331285 331285 3 SVPTWLK Unmodified 829.46979 0.46978929 1887 P62277 RPS13 40S ribosomal protein S13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 58.425 58.445 2 0.033465 66238 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 71.949 45.84 230160000 0 0 0 26659000 28335000 29989000 33607000 30248000 28748000 920600 0 1032300 0 50620000 0 50078 1887 44943 419885;419886;419887;419888;419889;419890;419891;419892;419893 331286 331286 1 SVPVCEPVPEIDNIEPSSNKDDDFLEK Unmodified 3071.4281 0.42812657 2986 Q6VMQ6 ATF7IP Activating transcription factor 7-interacting protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 85.569 80.924 3 1.1782E-29 101506 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.412 86.632 64380000 10246000 50827000 3307400 0 0 0 0 0 0 0 0 0 0 0 0 50079 2986 44944 419894;419895;419896;419897 331287;331288;331289;331290;331291 331287 5 SVPVTVDDDDDDNDPENRIAK Unmodified 2328.0353 0.035342052 1498 P46100 ATRX Transcriptional regulator ATRX yes yes 0 0 1 By MS/MS 2 0 1 1 56.837 48.657 3 0.0019761 66407 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.598 39.246 12228000 12228000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50080 1498 44945 419898 331292 331292 1 SVQAGNPGGPGPGGR Unmodified 1306.6378 0.63781068 3737 Q96AE4 FUBP1 Far upstream element-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 17.767 17.853 2 5.725E-10 18000 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 95.477 83.63 58288000 0 0 0 0 6817200 7481700 7280700 0 5600700 0 0 0 0 0 31108000 50081 3737 44946 419899;419900;419901;419902;419903;419904;419905;419906 331293;331294;331295;331296;331297;331298;331299;331300;331301 331295 9 SVQANLDQSQR Unmodified 1244.6109 0.61092723 2646 Q27J81 INF2 Inverted formin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 22.111 22.458 2 2.8386E-05 23421 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 119.22 90.497 34782000 0 0 0 0 0 0 0 0 0 0 0 0 34782000 0 0 50082 2646 44947 419907;419908;419909 331302;331303;331304 331304 3 SVQANLDQSQRGSSPQNTTTPK Unmodified 2343.1415 0.14147888 2646 Q27J81 INF2 Inverted formin-2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 34.096 29.342 3 1.2096E-84 38641 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.64 123.89 31433000 8036500 20459000 2937800 0 0 0 0 0 0 0 0 0 0 0 0 50083 2646 44948 419910;419911;419912 331305;331306;331307;331308 331306 4 SVQATTENK Unmodified 976.48254 0.48253882 2223 Q13011 ECH1 Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 6.2729 2.9366 2 0.0074224 5930 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.909 56.585 28014000 11024000 16989000 0 0 0 0 0 0 0 0 0 0 0 0 0 50084 2223 44949 419913;419914 331309 331309 1 SVQCLYTSSAFPSGK Unmodified 1630.7661 0.76610724 488 O75376 NCOR1 Nuclear receptor corepressor 1 yes yes 0 0 0 By MS/MS 10 0 1 1 46.713 46.877 3 0.037397 52447 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 16.996 5.8909 18861000 0 0 0 0 0 0 0 0 0 18861000 0 0 0 0 0 50085 488 44950 419915 331310 331310 1 SVQEVLQK Unmodified 929.5182 0.51819605 380 O43929 ORC4 Origin recognition complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.855 30.047 2 0.0068357 31262 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.662 46.919 194170000 0 0 0 13929000 12760000 16964000 14753000 12438000 10124000 17744000 16417000 25482000 17494000 16481000 19583000 50086 380 44951 419916;419917;419918;419919;419920;419921;419922;419923;419924;419925;419926;419927 331311;331312;331313;331314;331315;331316;331317;331318;331319;331320 331314 9 SVQNDSQAIAEVLNQLK Unmodified 1855.964 0.96395543 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.67 2.98 2 10 2 2 2 2 1 1 2 93.214 92.471 2;3 2.2583E-31 107340 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 120.14 106.33 150590000 0 102080000 0 5252700 0 0 0 12030000 0 14300000 3318000 0 0 1276800 12331000 50087 1029 44952 419928;419929;419930;419931;419932;419933;419934;419935;419936;419937;419938;419939 331321;331322;331323;331324;331325;331326;331327;331328;331329 331326 8 SVQNLANLVEFGAK Unmodified 1488.7936 0.79364262 1116 P20936 RASA1 Ras GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 89.93 84.776 2 8.164E-31 107511 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 181.68 155.24 33559000 12592000 19739000 1229000 0 0 0 0 0 0 0 0 0 0 0 0 50088 1116 44953 419940;419941;419942 331330;331331;331332;331333 331333 4 SVQNSHFK Unmodified 945.46683 0.46682918 1331 P33981 TTK Dual specificity protein kinase TTK yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 6.8845 7.0071 2 0.016731 4945 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 66.799 27.136 32159000 0 0 0 1717900 2608500 3035600 3524300 4387100 3943100 2626100 3597600 0 2124900 1557500 3035900 50089 1331 44954 419943;419944;419945;419946;419947;419948;419949;419950;419951;419952;419953 331334;331335;331336;331337;331338 331337 5 SVQPEVELSSGGGDEGADEPR Unmodified 2113.94 0.9399851 3432 Q8NEY1 NAV1 Neuron navigator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 2 53.562 53.448 2 2.1899E-24 60580 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 97.417 86.512 15300000 0 0 0 2568300 2223000 0 2703700 0 0 0 0 7804700 0 0 0 50090 3432 44955 419954;419955;419956;419957;419958 331339;331340;331341;331342 331340 4 SVQPEVELSSGGGDEGADEPRGAGRK Unmodified 2583.2161 0.21610038 3432 Q8NEY1 NAV1 Neuron navigator 1 yes yes 0 0 2 By MS/MS 2 0 1 1 44.985 41.17 4 3.8247E-05 51893 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 58.418 57.633 6429100 0 0 6429100 0 0 0 0 0 0 0 0 0 0 0 0 50091 3432 44956 419959 331343 331343 1 SVQPQSHKPQPTR Unmodified 1488.7797 0.77972389 2961 Q6PKG0 LARP1 La-related protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.676 6.8002 3 3.712E-05 4592 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 88.087 75.46 168050000 0 0 0 7576300 11061000 6580400 12945000 10941000 7847300 18759000 19350000 16922000 20739000 16623000 18708000 50092 2961 44957 419960;419961;419962;419963;419964;419965;419966;419967;419968;419969;419970;419971 331344;331345;331346;331347;331348;331349;331350;331351;331352;331353;331354;331355;331356;331357 331345 14 SVQPQSHKPQPTRK Unmodified 1616.8747 0.87468691 2961 Q6PKG0 LARP1 La-related protein 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 5.7288 5.857 4 0.01072 3795 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 35.657 28.904 96813000 0 0 0 0 3768700 9231900 0 6536700 8048600 13297000 6845100 17185000 14006000 17894000 0 50093 2961 44958 419972;419973;419974;419975;419976;419977;419978;419979;419980 331358;331359 331359 2 SVQPTSEER Unmodified 1031.4884 0.48835248 4898 Q9UHD8 SEPT9 Septin-9 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 7.816 7.9829 2 0.030461 6369 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 48.157 28.67 9541900 0 0 0 0 0 3502300 0 0 0 0 6039600 0 0 0 0 50094 4898 44959 419981;419982 331360 331360 1 SVQPTSEERIPK Unmodified 1369.7201 0.72014333 4898 Q9UHD8 SEPT9 Septin-9 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 28.737 28.079 3 0.013129 37159 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 46.063 35.941 282080000 0 53942000 10253000 9593100 13075000 19651000 15732000 14516000 15342000 22270000 27854000 26958000 13491000 17319000 22084000 50095 4898 44960 419983;419984;419985;419986;419987;419988;419989;419990;419991;419992;419993;419994;419995;419996;419997 331361;331362;331363;331364;331365;331366 331361 6 SVQQTVELLTRK Unmodified 1400.7987 0.798728 4461 Q9H944 MED20 Mediator of RNA polymerase II transcription subunit 20 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 66.475 66.629 3 0.013157 75606 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 26.532 11.741 70515000 0 0 0 0 2603100 5290700 4143600 6251200 3787500 6726000 6745600 8351400 6772500 6287300 13556000 50096 4461 44961 419998;419999;420000;420001;420002;420003;420004;420005;420006;420007;420008 331367;331368;331369;331370 331369 4 SVQSQGFK Unmodified 879.44503 0.4450311 1371 P36405 ARL3 ADP-ribosylation factor-like protein 3 yes yes 0 0 0 By MS/MS By MS/MS By matching 2 0 3 1 1 1 15.574 12.289 2 0.017927 16146 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.55 42.505 385860000 24865000 342910000 18083000 0 0 0 0 0 0 0 0 0 0 0 0 50097 1371 44962 420009;420010;420011 331371;331372 331371 2 SVQTTLQTDEVK Unmodified 1347.6882 0.6881745 506;600 O75477;O94905 ERLIN1;ERLIN2 Erlin-1;Erlin-2 no no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 40.058 40.152 2 4.9392E-08 44652 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 121.6 102.86 92771000 0 0 0 14310000 7446000 7058900 6824200 10095000 7916500 11714000 0 0 10587000 9071200 7748200 50098 506;600 44963 420012;420013;420014;420015;420016;420017;420018;420019;420020;420021;420022 331373;331374;331375;331376;331377;331378;331379 331375 7 SVQVTESDLGSESELLVTIGATVPTGFEQTAADEVREK Unmodified 3991.975 0.97498021 4176 Q9BV44 THUMPD3 THUMP domain-containing protein 3 yes yes 0 0 1 By MS/MS 2.33 0.471 2 1 3 98.322 91.731 3;4 2.4179E-133 116678 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 137.91 129.07 94499000 94499000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50099 4176 44964 420023;420024;420025 331380;331381;331382;331383 331381 3 SVQVVSAAAAAK Acetyl (Protein N-term) 1142.6295 0.62953741 3868 Q96HN2 AHCYL2 Putative adenosylhomocysteinase 3 yes yes 1 0 0 By MS/MS 1 0 1 1 103.38 108.64 2 3.9194E-05 88712 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 97.472 44.305 8638600 8638600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50100 3868 44965 420026 331384 331384 1 SVRVPNGGGGGGGLPISTVR Unmodified 1835.9966 0.99659296 956 P11802 CDK4 Cyclin-dependent kinase 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 60.616 60.984 3 0.0023229 69315 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 29.447 19.836 55363000 0 0 0 0 0 0 0 0 0 0 0 10650000 5753900 13707000 25252000 50101 956 44966 420027;420028;420029;420030 331385;331386 331386 2 SVRYSSSK Acetyl (Protein N-term) 954.47706 0.47705951 72 CON__P13645;P13645 KRT10 Keratin, type I cytoskeletal 10 yes no 1 0 1 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 13.369 13.499 2 0.0051549 11960 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 108.74 26.959 + 69239000 0 0 0 3282100 1660900 4197400 3611500 12615000 7183300 0 2712000 9457500 8598800 15920000 0 50102 72 44967 420031;420032;420033;420034;420035;420036;420037;420038;420039;420040 331387;331388;331389;331390;331391 331390 2 SVSAADIERYEK Unmodified 1366.6729 0.67285879 501 O75449 KATNA1 Katanin p60 ATPase-containing subunit A1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 53.332 48.468 3 0.0038521 62924 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.65 50.637 37349000 0 28861000 8488100 0 0 0 0 0 0 0 0 0 0 0 0 50103 501 44968 420041;420042 331392;331393;331394 331392 3 SVSDNDIRK Unmodified 1032.52 0.51998696 1755 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 7.9988 8.2789 2 0.030379 5951 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 101.54 73.368 41248000 0 0 0 0 0 0 0 0 0 0 25084000 16164000 0 0 0 50104 1755 44969 420043;420044 331395;331396;331397 331395 3 SVSDYDGK Unmodified 869.37668 0.37667677 838 P07237 P4HB Protein disulfide-isomerase yes yes 0 0 0 By MS/MS By MS/MS 1.75 0.829 2 1 1 1 3 43.006 41.095 2 0.028065 102325 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 77.923 64.874 260240000 0 260240000 0 0 0 0 0 0 0 0 0 0 0 0 0 50105 838 44970 420045;420046;420047;420048 331398;331399;331400 331400 3 SVSEIFVELQGFLAAEQDIREEIRK Acetyl (Protein N-term) 2947.5291 0.52910167 2553 Q15631 TSN Translin yes yes 1 0 2 By MS/MS By MS/MS 2 0 2 1 1 105.82 99.377 3 1.9763E-08 125147 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.548 51.754 7754000 5774200 1979800 0 0 0 0 0 0 0 0 0 0 0 0 0 50106 2553 44971 420049;420050 331401;331402 331402 2 SVSESHTSCPAESASDAAPLQR Unmodified 2286.0183 0.018252199 3539 Q8WUA7 TBC1D22A TBC1 domain family member 22A yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS 8.4 3.2 1 4 1 1 1 1 1 38.237 37.468 3 0.00020472 40738 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.115 37.674 32005000 0 14398000 0 0 0 0 2000600 0 0 3591000 0 0 0 3477600 8537200 50107 3539 44972 420051;420052;420053;420054;420055 331403;331404;331405 331405 3 SVSFSLK Unmodified 766.4225 0.42250475 2283 Q13416 ORC2 Origin recognition complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 49.806 50.377 2 0.025177 56821 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 81.297 10.384 41894000 0 0 0 0 0 0 0 0 0 0 21988000 0 0 0 19907000 50108 2283 44973 420056;420057 331406 331406 1 SVSFYSGVVENESLK Unmodified 1643.8043 0.80426689 5353 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 2 1 1 63.841 63.966 3 0.013383 73147 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 23.831 9.0675 + 86582000 0 0 0 5608000 0 0 0 0 8319600 9624300 0 40560000 13884000 8586100 0 50109 5353 44974 420058;420059;420060;420061;420062;420063;420064 331407 331407 1 SVSGPIEVLLVNK Unmodified 1353.7868 0.78676633 2600 Q16254 E2F4 Transcription factor E2F4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 85.887 85.684 2 0.0016862 99474 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 63.283 44.972 42485000 0 0 6320600 0 3080200 2843000 0 0 0 5035400 4093900 6238400 3878900 4304900 6689800 50110 2600 44975 420065;420066;420067;420068;420069;420070;420071;420072;420073;420074 331408;331409;331410;331411;331412;331413;331414;331415;331416;331417 331415 9 SVSGTDVQEECREK Unmodified 1622.7206 0.72061362 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 6 2 20 2 4 2 1 2 1 2 1 1 2 2 2 2 2 2 16.482 15.603 2;3 8.6057E-39 20260 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 231.05 220.74 997620000 51303000 518990000 9708400 10097000 7664600 7903200 11862000 10742000 7860600 25656000 49305000 59616000 32458000 58129000 136320000 50111 1564 44976 420075;420076;420077;420078;420079;420080;420081;420082;420083;420084;420085;420086;420087;420088;420089;420090;420091;420092;420093;420094;420095;420096;420097;420098;420099;420100;420101;420102 331418;331419;331420;331421;331422;331423;331424;331425;331426;331427;331428;331429;331430;331431;331432;331433;331434;331435;331436;331437 331425 17 SVSHDLEQLHR Unmodified 1319.6582 0.65821178 5287 Q9Y6J9 TAF6L TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 32.55 32.898 3 0.0091582 34851 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.432 28.368 24318000 0 0 0 0 0 3947000 2380100 0 2540500 0 1668200 5018900 0 0 8763400 50112 5287 44977 420103;420104;420105;420106;420107;420108 331438;331439;331440 331439 3 SVSHQTVQQLVLEK Unmodified 1594.8679 0.8678702 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.08 3.71 3 2 8 2 2 1 1 1 1 1 2 1 1 57.531 55.443 2;3 6.8512E-15 76642 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.203 85.512 499860000 351590000 50688000 36013000 9507600 0 9241400 6056400 7288900 0 12952000 0 0 0 12865000 3650900 50113 645 44978 420109;420110;420111;420112;420113;420114;420115;420116;420117;420118;420119;420120;420121 331441;331442;331443;331444;331445;331446;331447;331448;331449 331446 7 SVSIQEEQSAPSSEK Unmodified 1604.753 0.7529596 3201 Q86XZ4 SPATS2 Spermatogenesis-associated serine-rich protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.595 29.787 2 2.9043E-28 31922 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 142.08 128.97 81817000 0 0 0 4269600 3770800 4401400 6091100 5335800 4769600 6649600 7912300 10712000 9482600 7562400 10860000 50114 3201 44979 420122;420123;420124;420125;420126;420127;420128;420129;420130;420131;420132;420133 331450;331451;331452;331453;331454;331455;331456;331457;331458;331459;331460;331461 331459 12 SVSIQNITGVGNDENMSNTWK Unmodified 2293.0645 0.06447411 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 0 0 By MS/MS 2 0 1 1 83.564 78.844 2 0.002131 98024 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.075 44.106 20528000 0 20528000 0 0 0 0 0 0 0 0 0 0 0 0 0 50115 2193 44980 420134 331462 331462 1 SVSLTGAPESVQK Unmodified 1301.6827 0.68269519 3690 Q92945 KHSRP Far upstream element-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 44.201 43.934 2 1.0356E-22 55333 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 152.04 119.63 2038500000 0 114510000 0 95588000 113090000 112830000 172080000 119580000 156550000 139510000 154640000 185920000 148450000 193970000 331830000 50116 3690 44981 420135;420136;420137;420138;420139;420140;420141;420142;420143;420144;420145;420146;420147 331463;331464;331465;331466;331467;331468;331469;331470;331471;331472;331473;331474;331475;331476;331477 331467 15 SVSMLSLNTPNSNRK Oxidation (M) 1662.8359 0.83591814 4455 Q9H8V3 ECT2 Protein ECT2 yes yes 0 1 1 By MS/MS By MS/MS By matching 10 0 3 1 1 1 39.867 39.769 3 0.00047463 44170 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 49.482 38.042 9082500 0 0 0 0 1507400 0 4311000 0 3264100 0 0 0 0 0 0 50117 4455 44982 420148;420149;420150 331478 331478 5894 1 SVSMLSLNTPNSNRK Unmodified 1646.841 0.84100352 4455 Q9H8V3 ECT2 Protein ECT2 yes yes 0 0 1 By matching By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 51.837 52.358 3 0.00064441 58206 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.914 35.348 20460000 0 0 0 0 0 0 0 0 0 0 4526300 4540700 2694200 0 8699200 50118 4455 44982 420151;420152;420153;420154 331479 331479 1 SVSNHSNLPDIVSK Unmodified 1495.7631 0.76307078 2895 Q6N069 NAA16 N-alpha-acetyltransferase 16, NatA auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.61 3.03 4 19 2 1 1 2 2 2 2 2 2 2 2 2 1 47.427 46.393 2;3 5.0881E-72 51916 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 215.02 183.15 2950600000 84908000 49393000 21450000 63226000 126430000 145210000 164630000 252610000 193210000 402600000 584090000 858010000 0 0 4800700 50119 2895 44983 420155;420156;420157;420158;420159;420160;420161;420162;420163;420164;420165;420166;420167;420168;420169;420170;420171;420172;420173;420174;420175;420176;420177 331480;331481;331482;331483;331484;331485;331486;331487;331488;331489;331490;331491;331492;331493;331494;331495 331489 15 SVSQDLIK Unmodified 888.49165 0.49164694 5054 Q9UPQ0 LIMCH1 LIM and calponin homology domains-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.617 36.798 2 0.034963 40705 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 52.786 21.496 413000000 0 0 0 21564000 25309000 30537000 30840000 28312000 24519000 33803000 40511000 46238000 41157000 33479000 56730000 50120 5054 44984 420178;420179;420180;420181;420182;420183;420184;420185;420186;420187;420188;420189 331496;331497;331498 331496 3 SVSSDSLGPPRPAPAR Unmodified 1592.8271 0.82706802 4801 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.634 37.815 3 0.00037553 40608 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.988 42.148 192230000 0 0 0 10609000 13770000 13354000 20071000 15954000 13061000 19510000 16797000 18438000 20664000 15645000 14353000 50121 4801 44985 420190;420191;420192;420193;420194;420195;420196;420197;420198;420199;420200;420201 331499;331500;331501;331502;331503;331504;331505;331506;331507;331508;331509 331501 10 SVSSNVASVSPIPAGSK Unmodified 1585.8312 0.83115034 5282 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 55.58 55.688 2 2.5888E-31 63392 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 139.46 124.32 119760000 0 0 0 8067300 7669800 12545000 9401900 8764000 7125400 14031000 14453000 17723000 0 0 19977000 50122 5282 44986 420202;420203;420204;420205;420206;420207;420208;420209;420210;420211 331510;331511;331512;331513;331514;331515;331516 331510 7 SVSSPTSSNTPTPTK Unmodified 1489.726 0.72601657 2746 Q5M775 SPECC1 Cytospin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 22.538 23.028 2 7.2393E-11 23483 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 111.63 101.11 21549000 0 0 0 0 0 0 0 0 1796500 0 6822200 8053600 0 0 4876900 50123 2746 44987 420212;420213;420214;420215 331517;331518;331519;331520 331517 4 SVSSQSSSSVSSQVTTAGSGK Unmodified 1956.9236 0.92360676 4733 Q9NXV6 CDKN2AIP CDKN2A-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.255 30.444 2 8.2081E-59 32720 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 169.37 159.86 101070000 0 0 0 5051900 5927200 9154000 5574100 5148400 5311100 7558300 9730200 13815000 7869900 8070000 17860000 50124 4733 44988 420216;420217;420218;420219;420220;420221;420222;420223;420224;420225;420226;420227 331521;331522;331523;331524;331525;331526;331527;331528;331529;331530;331531;331532 331529 12 SVSSSPWLPQDGFDPSDYAEPMDAVVK Unmodified 2923.3222 0.32220494 4615 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 yes yes 0 0 0 By MS/MS 2 0 1 1 96.473 91.652 3 0.010699 113519 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 23.221 16.572 29090000 0 29090000 0 0 0 0 0 0 0 0 0 0 0 0 0 50125 4615 44989 420228 331533 331533 1 SVSSSSYR Unmodified 871.40356 0.40356022 870 P08670 VIM Vimentin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.874 8.0048 2 0.0047287 5865 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 113.5 99.342 333340000 0 0 0 16560000 26448000 31256000 30618000 31611000 39880000 19070000 44311000 33152000 18465000 16184000 25790000 50126 870 44990 420229;420230;420231;420232;420233;420234;420235;420236;420237;420238;420239;420240 331534;331535;331536;331537;331538;331539 331537 6 SVSSSSYRR Unmodified 1027.5047 0.50467125 870 P08670 VIM Vimentin yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.5763 6.7005 2 0.027762 4555 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 105.14 82.064 545520000 0 0 0 31077000 57045000 52986000 66462000 71768000 62086000 33308000 42961000 36161000 26924000 27490000 37248000 50127 870 44991 420241;420242;420243;420244;420245;420246;420247;420248;420249;420250;420251;420252 331540;331541;331542;331543;331544;331545;331546;331547;331548 331544 8 SVSSVLSSLTPAK Unmodified 1274.7082 0.70818166 2272 Q13330 MTA1 Metastasis-associated protein MTA1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78.794 77.81 2 1.1834E-19 89278 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 154.24 125.15 127200000 15200000 17725000 1554800 4738400 4816800 6615400 6650700 6036900 6234000 8378600 7938800 10047000 6798000 9020900 15446000 50128 2272 44992 420253;420254;420255;420256;420257;420258;420259;420260;420261;420262;420263;420264;420265;420266;420267 331549;331550;331551;331552;331553;331554;331555;331556;331557;331558 331555 8 SVSTMNLSK Oxidation (M) 981.4801 0.48009598 2398 Q14244 MAP7 Ensconsin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.039 15.21 2 0.0080315 14856 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 61.679 27.59 154480000 0 0 0 7012400 11518000 10532000 16022000 8423400 8054900 14447000 20287000 18767000 14390000 10818000 14207000 50129 2398 44993 420268;420269;420270;420271;420272;420273;420274;420275;420276;420277;420278;420279 331559;331560;331561;331562;331563;331564;331565 331560 3931 7 SVSTMNLSK Unmodified 965.48518 0.48518136 2398 Q14244 MAP7 Ensconsin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 28.527 28.692 2 0.0030604 30472 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 91.853 53.435 169320000 0 0 0 13737000 13700000 0 14451000 18428000 10895000 21043000 24935000 24194000 15473000 12462000 0 50130 2398 44993 420280;420281;420282;420283;420284;420285;420286;420287;420288;420289;420290 331566;331567;331568;331569;331570;331571;331572;331573;331574;331575;331576 331570 11 SVSTPLTTLDATSDK Unmodified 1534.7726 0.77263241 2649 Q2KHR3 QSER1 Glutamine and serine-rich protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.125 65.213 2 4.5248E-07 74606 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 88.021 73.33 85447000 0 0 0 4504400 4493500 5565200 6361900 5793200 6745100 7116700 6800300 8953600 9165400 8204400 11743000 50131 2649 44994 420291;420292;420293;420294;420295;420296;420297;420298;420299;420300;420301;420302 331577;331578;331579;331580;331581;331582;331583;331584;331585;331586 331578 9 SVSTPLTTLDATSDKK Unmodified 1662.8676 0.86759543 2649 Q2KHR3 QSER1 Glutamine and serine-rich protein 1 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 62.306 56.967 3 0.0089492 73404 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 28.869 18.673 28610000 0 28610000 0 0 0 0 0 0 0 0 0 0 0 0 0 50132 2649 44995 420303;420304 331587;331588 331587 2 SVSTPQSTGSAATMTALAATK Unmodified 1979.9834 0.98337024 5023 Q9UMZ2 SYNRG Synergin gamma yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching 8.4 3.2 1 4 1 1 1 1 1 66.166 65.207 2 8.8815E-10 82237 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.506 76.103 35338000 0 22247000 0 0 0 0 1843500 0 0 4429900 0 0 0 3005000 3812600 50133 5023 44996 420305;420306;420307;420308;420309 331589;331590;331591 331590 3 SVSTPSEAGSQDSGDGAVGSR Unmodified 1949.8563 0.85625547 2281 Q13409 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 27.369 27.567 2;3 1.8434E-37 28350 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 124.45 118.6 391600000 0 0 0 16920000 19501000 26208000 25352000 22928000 21725000 33577000 47060000 53058000 31153000 29045000 65071000 50134 2281 44997 420310;420311;420312;420313;420314;420315;420316;420317;420318;420319;420320;420321;420322;420323;420324;420325;420326;420327;420328;420329;420330;420331;420332;420333 331592;331593;331594;331595;331596;331597;331598;331599;331600;331601;331602;331603 331598 12 SVSTTGSLQR Unmodified 1034.5356 0.53563702 3094 Q7Z460 CLASP1 CLIP-associating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 17.991 18.179 2 0.014232 18716 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 50.805 39.394 133480000 0 0 0 8573000 9349000 10874000 9971300 8625300 8103500 10726000 12783000 18449000 10796000 10369000 14858000 50135 3094 44998 420334;420335;420336;420337;420338;420339;420340;420341;420342;420343;420344;420345 331604;331605;331606;331607;331608;331609;331610;331611 331604 7 SVSTTNIAGHFNDESPLGLR Unmodified 2114.0392 0.039245638 3693 Q92974 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 0 0 0 By MS/MS 10 0 1 1 75.241 75.553 3 5.0329E-47 86707 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 97.457 77.904 30842000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30842000 50136 3693 44999 420346 331612 331612 1 SVSTTNIAGHFNDESPLGLRR Unmodified 2270.1404 0.14035667 3693 Q92974 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 2 2 2 1 1 1 1 1 2 68.835 69.045 3;4 6.2665E-05 79351 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 45.696 38.582 139750000 0 0 0 0 0 16711000 0 10100000 17657000 6628300 7079200 10303000 3292200 5464800 62511000 50137 3693 45000 420347;420348;420349;420350;420351;420352;420353;420354;420355;420356;420357;420358;420359 331613;331614;331615;331616;331617;331618;331619;331620;331621;331622;331623 331620 10 SVSVDSGEQR Unmodified 1062.4942 0.49416614 3155 Q86UU0 BCL9L B-cell CLL/lymphoma 9-like protein yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.441 12.589 2 0.0052778 11511 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 69.598 60.182 70301000 0 0 0 3556700 4220600 5301300 5204000 4702900 5783700 7273200 5539900 7987300 5410400 7909800 7411200 50138 3155 45001 420360;420361;420362;420363;420364;420365;420366;420367;420368;420369;420370;420371 331624;331625;331626;331627;331628;331629 331626 2 SVSVDSGEQREAGTPSLDSEAK Unmodified 2248.0455 0.045512807 3155 Q86UU0 BCL9L B-cell CLL/lymphoma 9-like protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.288 41.466 3 2.5703E-43 46000 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 109.85 97.724 251990000 0 0 0 15241000 10903000 14438000 13859000 18830000 17983000 24649000 18647000 29311000 20397000 28459000 39270000 50139 3155 45002 420372;420373;420374;420375;420376;420377;420378;420379;420380;420381;420382;420383 331630;331631;331632;331633;331634;331635;331636;331637;331638;331639;331640;331641;331642 331631 13 SVSWSQFNK Unmodified 1081.5193 0.51925868 1449 P42226 STAT6 Signal transducer and activator of transcription 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 52.728 52.943 2 0.014158 59698 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 58.716 43.346 237340000 0 0 0 0 3535200 43311000 5319200 7028800 12952000 33111000 27084000 19812000 26485000 17070000 41634000 50140 1449 45003 420384;420385;420386;420387;420388;420389;420390;420391;420392;420393;420394 331643;331644;331645 331644 3 SVTAFFK Unmodified 798.42759 0.42759012 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 67.928 60.821 2 0.036349 81597 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.614 56.447 580410000 499980000 80434000 0 0 0 0 0 0 0 0 0 0 0 0 0 50141 2102 45004 420395;420396 331646 331646 1 SVTAHLAAK Unmodified 896.50797 0.50796571 4750 Q9NYU1 UGGT2 UDP-glucose:glycoprotein glucosyltransferase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 14.786 15.01 2 0.022062 13628 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 51.736 28.693 34234000 0 0 0 0 1438300 0 1776300 0 1472700 3306700 4210300 5984100 3816400 3961600 8267200 50142 4750 45005 420397;420398;420399;420400;420401;420402;420403;420404;420405 331647;331648;331649;331650;331651 331649 5 SVTDSIRDEYAFLQK Unmodified 1770.8788 0.87882882 154 O00429 DNM1L Dynamin-1-like protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 4 10 2 1 1 1 1 1 1 1 1 1 1 1 1 78.695 77.119 2;3 0.00065678 96339 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.972 62.535 388200000 100510000 118460000 10368000 0 0 21921000 5150600 10173000 8082000 19886000 14755000 15793000 10317000 11444000 41338000 50143 154 45006 420406;420407;420408;420409;420410;420411;420412;420413;420414;420415;420416;420417;420418;420419 331652;331653;331654;331655;331656;331657;331658;331659;331660 331652 8 SVTDSVMGPK Unmodified 1019.4957 0.49574604 204 O14727 APAF1 Apoptotic protease-activating factor 1 yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 36.527 30.855 2 0.015829 41169 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.993 29.67 148560000 5026100 143530000 0 0 0 0 0 0 0 0 0 0 0 0 0 50144 204 45007 420420;420421 331661 331661 1 SVTEGASARK Unmodified 1004.5251 0.52507234 2916 Q6P1J9 CDC73 Parafibromin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 6.1026 3.1434 2 1.4474E-05 5155 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 146.69 93.527 718340000 367570000 135440000 215340000 0 0 0 0 0 0 0 0 0 0 0 0 50145 2916 45008 420422;420423;420424 331662;331663 331663 2 SVTEQGAELSNEER Unmodified 1547.7063 0.70634376 1940 P63104 YWHAZ 14-3-3 protein zeta/delta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.15 2.41 2 1 24 3 2 2 2 2 2 2 2 2 2 2 2 2 31.933 31.579 2;3 0 33394 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 303.2 269.32 3134500000 0 176580000 0 115520000 107620000 130670000 101490000 89816000 56846000 147510000 425850000 475780000 91307000 303080000 912460000 50146 1940 45009 420425;420426;420427;420428;420429;420430;420431;420432;420433;420434;420435;420436;420437;420438;420439;420440;420441;420442;420443;420444;420445;420446;420447;420448;420449;420450;420451 331664;331665;331666;331667;331668;331669;331670;331671;331672;331673;331674;331675;331676;331677;331678;331679;331680;331681;331682;331683;331684 331672 19 SVTEQGAELSNEERNLLSVAYK Unmodified 2436.2132 0.21324684 1940 P63104 YWHAZ 14-3-3 protein zeta/delta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 4.28 3.56 12 1 5 3 8 2 1 1 1 1 1 86.378 83.282 2;3 3.3652E-245 102723 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 289.32 274.76 6779000000 466930000 5268900000 922940000 0 0 0 0 0 0 12395000 13177000 7803000 0 4415300 82445000 50147 1940 45010 420452;420453;420454;420455;420456;420457;420458;420459;420460;420461;420462;420463;420464;420465;420466;420467;420468;420469 331685;331686;331687;331688;331689;331690;331691;331692;331693;331694;331695;331696;331697;331698;331699;331700;331701;331702;331703;331704;331705;331706;331707;331708 331697 22 SVTGGMCSVYLK Unmodified 1300.6155 0.6155436 136 O00267 SUPT5H Transcription elongation factor SPT5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 57.816 58.104 2 0.009337 66388 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 47.844 20.59 26102000 0 0 0 0 0 0 4296400 0 0 0 0 9180700 12625000 0 0 50148 136 45011 420470;420471;420472 331709;331710;331711 331710 3 SVTGGMCSVYLK Oxidation (M) 1316.6105 0.61045823 136 O00267 SUPT5H Transcription elongation factor SPT5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 42.14 42.394 2 0.009203 46250 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.77 29.103 41124000 0 0 0 0 0 9186500 6213200 0 4792500 5558500 0 0 2271900 5857100 7244500 50149 136 45011 420473;420474;420475;420476;420477;420478;420479 331712 331712 186 1 SVTLHTDVGDIK Acetyl (Protein N-term) 1325.6827 0.68269519 4366 Q9H2H8 PPIL3 Peptidyl-prolyl cis-trans isomerase-like 3 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 69.101 63.466 2 1.3324E-65 80751 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 246.63 155.56 715060000 18999000 690910000 5155000 0 0 0 0 0 0 0 0 0 0 0 0 50150 4366 45012 420480;420481;420482;420483 331713;331714;331715;331716;331717;331718;331719;331720 331713 6 SVTLPTHR Unmodified 909.50321 0.50321468 3592 Q8WXI4 ACOT11 Acyl-coenzyme A thioesterase 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 6 1 1 1 1 1 1 25.095 25.206 2 0.03731 27196 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 51.43 29.299 20866000 0 0 0 0 2946400 2422200 3224300 3490300 0 3087300 0 5695400 0 0 0 50151 3592 45013 420484;420485;420486;420487;420488;420489 331721 331721 1 SVTLYTVK Unmodified 909.51713 0.51713341 4252 Q9BYT8 NLN Neurolysin, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2.67 0.471 1 2 1 2 52.044 46.681 2 0.046406 60488 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.981 41.185 129320000 249190 129070000 0 0 0 0 0 0 0 0 0 0 0 0 0 50152 4252 45014 420490;420491;420492 331722 331722 1 SVTPERIAENFK Unmodified 1389.7252 0.72522871 1013 P15121 AKR1B1 Aldose reductase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.29 0.452 5 2 3 2 2 64.331 58.625 2;3 8.0415E-05 72437 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 125.74 80.579 5107500000 4147400000 433860000 526160000 0 0 0 0 0 0 0 0 0 0 0 0 50153 1013 45015 420493;420494;420495;420496;420497;420498;420499 331723;331724;331725;331726;331727;331728;331729;331730;331731;331732;331733;331734 331732 11 SVTPPEEQQEAEEPK Unmodified 1696.7792 0.77917435 1276 P30305 CDC25B M-phase inducer phosphatase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 31.89 31.828 2 0.0022678 34617 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 48.284 38.597 14884000 0 0 0 0 2375000 3020900 4207000 0 5281200 0 0 0 0 0 0 50154 1276 45016 420500;420501;420502;420503 331735;331736;331737;331738 331737 3 SVTTEPSSLK Unmodified 1047.5448 0.54480473 2960 Q6PJT7 ZC3H14 Zinc finger CCCH domain-containing protein 14 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 25.221 25.624 2 0.010944 25994 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 55.112 35.408 9147600 0 0 0 0 0 0 0 0 0 0 4262800 0 0 4884800 0 50155 2960 45017 420504;420505 331739 331739 1 SVTVAEGLIEDHFDVTVK Unmodified 1957.9997 0.99967223 4757 Q9NZ08 ERAP1 Endoplasmic reticulum aminopeptidase 1 yes yes 0 0 0 By MS/MS 3 0 1 1 88.76 85.191 3 0.00076332 86910 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 51.193 47.022 4043100 4043100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50156 4757 45018 420506 331740 331740 1 SVTVDSMDEEK Oxidation (M) 1254.5286 0.52856231 1242 P29084 GTF2E2 Transcription initiation factor IIE subunit beta yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 15.635 15.841 2 0.0017107 14943 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 66.962 59.03 40410000 0 0 0 0 1928600 2948200 2979900 2651000 0 0 6088600 7221400 5639800 3946200 7006700 50157 1242 45019 420507;420508;420509;420510;420511;420512;420513;420514;420515 331741;331742;331743;331744;331745;331746;331747 331743 1838 7 SVTVDSMDEEK Unmodified 1238.5336 0.53364769 1242 P29084 GTF2E2 Transcription initiation factor IIE subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 30.704 30.897 2 0.00028318 33267 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 93.111 81.748 52355000 0 0 0 0 4466200 5073000 4371400 0 3836500 6099000 7001000 0 7309800 5331700 8866500 50158 1242 45019 420516;420517;420518;420519;420520;420521;420522;420523;420524;420525 331748;331749;331750;331751;331752;331753;331754;331755;331756;331757 331753 10 SVTVIMEPHK Oxidation (M) 1155.5958 0.59579444 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 35.467 30.606 3 0.011017 38782 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 52.725 45.076 30761000 11022000 11482000 8257000 0 0 0 0 0 0 0 0 0 0 0 0 50159 5189 45020 420526;420527;420528 331758;331759 331759 6586 2 SVTVPEAENPR Unmodified 1197.599 0.59896556 464 O75152;A0A1B0GTU1 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 35.11 35.369 2 0.0058116 38356 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 72.607 57.94 88048000 0 0 0 5838400 0 8930900 8493900 0 0 9188300 8183100 14034000 8188100 10393000 14798000 50160 464 45021 420529;420530;420531;420532;420533;420534;420535;420536;420537 331760;331761;331762;331763;331764;331765;331766 331763 6 SVTVSSNSEPSTALTK Unmodified 1606.805 0.80499517 3018 Q6ZV73 FGD6 FYVE, RhoGEF and PH domain-containing protein 6 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 42.489 42.566 2 0.00048346 47595 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 79.693 37.357 18639000 0 0 0 0 1873700 2561800 2683700 2645000 1704900 2433200 4736800 0 0 0 0 50161 3018 45022 420538;420539;420540;420541;420542;420543;420544 331767;331768;331769 331768 3 SVTWPEEGK Unmodified 1031.4924 0.49237523 3955 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 41.612 41.293 2 0.0098298 52225 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.14 76.917 294490000 0 100240000 0 12360000 14126000 0 15960000 20219000 13408000 24084000 18540000 24027000 22010000 0 29520000 50162 3955 45023 420545;420546;420547;420548;420549;420550;420551;420552;420553;420554;420555 331770;331771;331772;331773 331771 3 SVVADTDQK Unmodified 961.47164 0.47163978 4365 Q9H2G2 SLK STE20-like serine/threonine-protein kinase yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 9.889 10.053 2 0.038976 9017 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 63.419 24.627 7338200 0 0 0 0 0 0 0 3871700 3466400 0 0 0 0 0 0 50163 4365 45024 420556;420557;420558 331774;331775 331774 2 SVVALHNLINNK Unmodified 1320.7514 0.75138388 1668 P51665 PSMD7 26S proteasome non-ATPase regulatory subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 1 2 1 2 1 2 2 2 1 1 2 59.699 59.874 2;3 0.00026788 68344 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 84.817 77.172 124600000 0 0 0 4653200 4270500 14417000 2604300 7370400 2298100 15720000 21865000 30394000 2571300 2737200 15697000 50164 1668 45025 420559;420560;420561;420562;420563;420564;420565;420566;420567;420568;420569;420570;420571;420572;420573;420574;420575;420576 331776;331777;331778;331779;331780;331781 331776 2 SVVANDASTR Unmodified 1018.5043 0.5043369 4727 Q9NXH9 TRMT1 tRNA (guanine(26)-N(2))-dimethyltransferase yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 11.557 11.752 2 0.0060966 9788 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 66.299 38.081 68155000 0 0 0 0 4642700 0 4240700 3824400 3580800 3453900 4317800 13305000 5757200 9213700 15819000 50165 4727 45026 420577;420578;420579;420580;420581;420582;420583;420584;420585;420586 331782;331783;331784;331785;331786 331784 2 SVVANFIVK Unmodified 975.57532 0.57531699 2647 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70.734 70.17 2 0.011279 80421 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 63.054 37.16 181820000 697720 33342000 0 5878800 6054400 12758000 10452000 7766200 8015900 17034000 16249000 18018000 10548000 12327000 22676000 50166 2647 45027 420587;420588;420589;420590;420591;420592;420593;420594;420595;420596;420597;420598;420599;420600 331787;331788;331789;331790;331791;331792;331793;331794;331795;331796 331787 10 SVVAPEHVK Unmodified 964.53418 0.53418046 136 O00267 SUPT5H Transcription elongation factor SPT5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17.427 16.745 2 0.020914 16814 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 52.716 29.697 437970000 82583000 196570000 99456000 2069800 2394200 4467000 3306400 0 2310600 6027400 6319600 7488800 5958700 7589300 11427000 50167 136 45028 420601;420602;420603;420604;420605;420606;420607;420608;420609;420610;420611;420612;420613;420614 331797;331798;331799;331800;331801;331802;331803;331804 331797 8 SVVAPPGAPK Unmodified 921.52837 0.5283668 1014 P15170 GSPT1 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.28 3.87 2 3 1 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 42.353 41.741 2 0.0069846 36240 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 63.565 40.546 3380300000 127990000 2227900000 25529000 44980000 36651000 82502000 59454000 47110000 42949000 105340000 122570000 96255000 85499000 91633000 183960000 50168 1014 45029 420615;420616;420617;420618;420619;420620;420621;420622;420623;420624;420625;420626;420627;420628;420629;420630;420631;420632 331805;331806;331807;331808;331809;331810;331811;331812;331813;331814;331815;331816;331817;331818;331819;331820;331821;331822;331823;331824;331825;331826;331827;331828;331829 331817 25 SVVAPPGAPKK Unmodified 1049.6233 0.62332982 1014 P15170 GSPT1 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 27.992 23.665 2 0.027239 33304 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.812 38.508 76813000 55384000 17095000 4334000 0 0 0 0 0 0 0 0 0 0 0 0 50169 1014 45030 420633;420634;420635 331830;331831 331830 0 SVVCSDVEQQVIVIEEEK Unmodified 2089.0249 0.024900707 3041 Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 82.107 82.265 2 2.836E-05 95444 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 89.629 77.074 13922000 0 0 0 0 0 0 0 1837100 0 5824600 2954500 3305700 0 0 0 50170 3041 45031 420636;420637;420638;420639 331832;331833 331833 2 SVVDFIQK Unmodified 934.51238 0.51238239 4921 Q9UI42 CPA4 Carboxypeptidase A4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 62.986 61.644 2 0.015415 70028 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 68.915 50.11 288100000 13611000 58052000 5945200 63436000 9598100 11432000 9569000 24956000 6906900 11402000 17967000 19936000 12798000 9839900 12650000 50171 4921 45032 420640;420641;420642;420643;420644;420645;420646;420647;420648;420649;420650;420651;420652;420653;420654;420655 331834;331835;331836;331837;331838;331839;331840;331841;331842;331843;331844;331845;331846 331838 13 SVVDYNAYAGVWSQDK Unmodified 1800.8319 0.83187862 3120 Q7Z739 YTHDF3 YTH domain-containing family protein 3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 77.86 78.013 2 6.8047E-06 89512 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.22 81.955 50161000 0 0 0 0 0 0 0 0 0 10455000 6288400 0 2790400 6229600 24397000 50172 3120 45033 420656;420657;420658;420659;420660 331847;331848;331849;331850 331848 4 SVVEEIQK Unmodified 930.50221 0.50221163 3923 Q96M96 FGD4 FYVE, RhoGEF and PH domain-containing protein 4 yes yes 0 0 0 By MS/MS 2 0 1 1 36.037 31.19 2 0.038507 40530 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.296 33.162 72617000 0 72617000 0 0 0 0 0 0 0 0 0 0 0 0 0 50173 3923 45034 420661 331851 331851 1 SVVESDEL Unmodified 876.40764 0.40764254 3134 Q86TC9 MYPN Myopalladin yes yes 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.68 45.85 1 1.3197E-11 51483 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 170.72 142.47 130560000 0 0 0 6015500 8359100 8111100 7961600 9990300 8068800 12133000 14065000 16205000 12092000 10599000 16956000 50174 3134 45035 420662;420663;420664;420665;420666;420667;420668;420669;420670;420671;420672;420673 331852 331852 1 SVVESSAPGANNLQVNALVAR Unmodified 2095.1022 0.10218025 1536 P48382 RFX5 DNA-binding protein RFX5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 2 2 2 2 2 1 2 2 2 2 75.95 76.042 2;3 4.7783E-37 87832 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 133.32 125.02 92798000 0 0 0 0 8948300 7752600 7520700 7979200 9218100 6277000 13020000 16544000 7702800 7835900 0 50175 1536 45036 420674;420675;420676;420677;420678;420679;420680;420681;420682;420683;420684;420685;420686;420687;420688;420689;420690;420691;420692 331853;331854;331855;331856;331857;331858;331859;331860;331861;331862 331860 10 SVVGLHAASK Unmodified 967.54508 0.5450795 4469 Q9H9B1 EHMT1 Histone-lysine N-methyltransferase EHMT1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20.683 20.117 2 0.0041316 28982 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 91.087 57.73 178680000 80983000 0 7623600 9511800 7017800 8951200 8869700 7599100 7131200 12448000 11671000 0 8923400 7948700 0 50176 4469 45037 420693;420694;420695;420696;420697;420698;420699;420700;420701;420702;420703;420704;420705;420706 331863;331864;331865;331866;331867;331868 331864 5 SVVGTPAYLAPEVLLNQGYNR Unmodified 2260.1852 0.18518159 4273 Q9BZL6 PRKD2 Serine/threonine-protein kinase D2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 91.388 91.529 3 0.00019458 106115 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.362 42.868 16823000 0 0 0 0 0 1046100 0 1718800 1378000 4552800 2498800 0 0 1164900 4464100 50177 4273 45038 420707;420708;420709;420710;420711;420712;420713 331869;331870;331871 331870 3 SVVLMSHLGRPDGVPMPDK Oxidation (M) 2050.034 0.033966025 733 P00558 PGK1 Phosphoglycerate kinase 1 yes yes 0 1 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 6 4 7 7 5 2 1 1 1 1 3 69.293 65.791 3;4 8.0777E-20 86523 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 109.89 101.29 654530000 402080000 45894000 0 0 0 0 0 1597100 0 0 14445000 11355000 0 12717000 166450000 50178 733 45039 420714;420715;420716;420717;420718;420719;420720;420721;420722;420723;420724;420725;420726;420727 331872;331873;331874;331875;331876;331877;331878;331879 331878 888;889 4 SVVLMSHLGRPDGVPMPDK 2 Oxidation (M) 2066.0289 0.028880647 733 P00558 PGK1 Phosphoglycerate kinase 1 yes yes 0 2 1 By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.47 2 1 14 1 1 1 1 1 3 3 1 1 2 55.424 55.225 3;4 2.6885E-08 61344 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 78.661 69.842 356040000 128830000 0 0 0 0 5132600 6533700 0 2531900 6875000 65212000 43800000 3902500 10037000 83188000 50179 733 45039 420728;420729;420730;420731;420732;420733;420734;420735;420736;420737;420738;420739;420740;420741;420742 331880;331881;331882;331883;331884;331885;331886 331885 888;889 4 SVVLMSHLGRPDGVPMPDK Unmodified 2034.0391 0.039051403 733 P00558 PGK1 Phosphoglycerate kinase 1 yes yes 0 0 1 By MS/MS By MS/MS 4.67 3.77 2 1 2 1 77.71 72.424 3;4 1.5799E-14 94873 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.92 56.576 258830000 133750000 0 0 0 0 0 0 0 0 0 0 0 0 0 125080000 50180 733 45039 420743;420744;420745 331887;331888;331889 331889 2 SVVLQLADGQIFK Unmodified 1416.7977 0.79766537 624 O95163 IKBKAP Elongator complex protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 6.87 3.84 5 1 9 3 2 1 1 1 1 1 1 1 1 1 1 88.452 86.601 2 1.8098E-11 100049 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 120.09 107.51 224610000 121840000 50288000 8497500 0 1802900 2884900 0 4461700 2738800 5290500 5033300 4302500 0 4331700 13144000 50181 624 45040 420746;420747;420748;420749;420750;420751;420752;420753;420754;420755;420756;420757;420758;420759;420760 331890;331891;331892;331893;331894;331895;331896;331897;331898;331899;331900;331901;331902;331903;331904;331905 331892 16 SVVNMEWDK Oxidation (M) 1122.5016 0.5015597 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.65 1.63 1 22 1 1 2 2 2 2 2 2 2 1 2 2 2 40.028 39.972 2 0.0055642 44232 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 69.598 61.667 277960000 0 55474000 0 5268300 13109000 19699000 18000000 13077000 13340000 26972000 25521000 11515000 18808000 23590000 33585000 50182 848 45041 420761;420762;420763;420764;420765;420766;420767;420768;420769;420770;420771;420772;420773;420774;420775;420776;420777;420778;420779;420780;420781;420782;420783 331906;331907;331908;331909;331910;331911;331912;331913;331914;331915;331916;331917;331918;331919;331920;331921;331922;331923;331924;331925;331926;331927;331928;331929 331906 1060 24 SVVNMEWDK Unmodified 1106.5066 0.50664508 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.464 58.579 2 0.0031541 66523 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 92.439 82.452 271070000 0 0 0 8347200 11963000 21195000 14942000 17172000 14425000 25140000 27660000 30034000 20741000 19424000 60030000 50183 848 45041 420784;420785;420786;420787;420788;420789;420790;420791;420792;420793;420794;420795 331930;331931;331932;331933;331934;331935;331936;331937;331938;331939;331940 331931 11 SVVPPNR Acetyl (Protein N-term) 809.43955 0.43955179 369 O43809 NUDT21 Cleavage and polyadenylation specificity factor subunit 5 yes yes 1 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 2 2 1 1 33.763 34.173 2 0.016418 36853 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 61.997 35.888 166990000 0 0 0 0 0 0 0 16292000 0 39362000 59223000 26405000 0 0 25704000 50184 369 45042 420796;420797;420798;420799;420800;420801;420802 331941;331942;331943 331941 3 SVVQATPQAPK Unmodified 1124.619 0.61897272 1142 P22670 RFX1 MHC class II regulatory factor RFX1 yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 29.054 29.633 2 0.00048771 31771 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 83.647 60.576 24071000 0 0 0 0 0 0 0 0 0 0 0 6989900 6183900 0 10897000 50185 1142 45043 420803;420804;420805 331944;331945 331945 2 SVVSDLEADDVK Unmodified 1275.6194 0.61942623 946 P11388 TOP2A DNA topoisomerase 2-alpha yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 8.12 3.26 1 1 6 2 1 1 1 1 1 1 60.926 59.73 2 0.0070391 76280 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.01 61.888 101410000 0 63161000 0 5103500 0 0 3640500 4334300 0 0 5297900 7205800 0 0 12666000 50186 946 45044 420806;420807;420808;420809;420810;420811;420812;420813 331946;331947;331948 331946 3 SVVSGSINTVLGSR Unmodified 1374.7467 0.74669243 4020 Q99541 PLIN2 Perilipin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 71.715 71.828 2 0.00011025 82498 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 83.182 54.385 35652000 0 0 0 0 2632700 3956600 0 0 0 5105600 4855100 5635100 4122600 3601000 5743500 50187 4020 45045 420814;420815;420816;420817;420818;420819;420820;420821 331949;331950;331951;331952;331953;331954;331955 331954 7 SVVSQSVCDYFFEAQEK Unmodified 2021.9041 0.90405729 5117 Q9Y2T2 AP3M1 AP-3 complex subunit mu-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 88.106 83.443 2;3 0.0071476 105572 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.65 52.505 62584000 7854400 50328000 4402300 0 0 0 0 0 0 0 0 0 0 0 0 50188 5117 45046 420822;420823;420824;420825 331956;331957;331958 331957 3 SVVTAPIIK Unmodified 926.58007 0.58006802 2935 Q6P4R8 NFRKB Nuclear factor related to kappa-B-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.299 55.43 2 0.0099526 63244 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 65.246 42.722 96988000 0 0 0 6808800 6264700 5596200 8757700 8358300 6080000 6614600 7350000 13815000 8918700 9031600 9392800 50189 2935 45047 420826;420827;420828;420829;420830;420831;420832;420833;420834;420835;420836;420837 331959;331960;331961;331962;331963 331959 5 SVVTGGVQSVMGSR Oxidation (M) 1378.6875 0.68746299 421 O60664 PLIN3 Perilipin-3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 37.725 37.906 2 8.3335E-21 41557 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 143.97 124.7 1865100000 0 0 0 95485000 95670000 123900000 185720000 158860000 113700000 150160000 169860000 312830000 234370000 101500000 123080000 50190 421 45048 420838;420839;420840;420841;420842;420843;420844;420845;420846;420847;420848;420849;420850;420851;420852;420853;420854;420855;420856;420857;420858;420859;420860;420861 331964;331965;331966;331967;331968;331969;331970;331971;331972;331973;331974;331975;331976;331977;331978;331979;331980;331981;331982;331983;331984;331985;331986;331987;331988 331974 530 20 SVVTGGVQSVMGSR Unmodified 1362.6925 0.69254837 421 O60664 PLIN3 Perilipin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 2 1 2 2 1 1 1 1 2 2 1 57.764 57.857 2;3 1.8401E-49 65263 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 172.17 147.4 1739800000 0 0 0 92753000 120760000 75954000 146320000 200930000 99483000 133860000 181670000 186990000 187640000 157040000 156390000 50191 421 45048 420862;420863;420864;420865;420866;420867;420868;420869;420870;420871;420872;420873;420874;420875;420876;420877;420878 331989;331990;331991;331992;331993;331994;331995;331996;331997;331998;331999;332000;332001;332002;332003;332004;332005 332001 14 SVVTSIFGVK Unmodified 1035.5964 0.59644637 1441 P41252 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 81.146 80.116 2 0.003098 92063 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 77.732 66.372 1376400000 526230000 298750000 0 20934000 20842000 49484000 28041000 40277000 26852000 59544000 52000000 62426000 32592000 45782000 112600000 50192 1441 45049 420879;420880;420881;420882;420883;420884;420885;420886;420887;420888;420889;420890;420891;420892;420893 332006;332007;332008;332009;332010;332011;332012;332013;332014;332015;332016;332017;332018 332011 10 SVVTVIDVFYK Unmodified 1268.7016 0.70163972 95 CON__Q5D862;Q5D862 FLG2 Filaggrin-2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 89.648 89.72 2 0.00051485 104123 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 82.749 70.524 + 37387000 0 0 0 5434200 1879200 2132500 1342400 3634300 2495700 7205000 3525600 3207800 1149000 1892200 3489700 50193 95 45050 420894;420895;420896;420897;420898;420899;420900;420901;420902;420903;420904;420905 332019;332020;332021;332022;332023;332024;332025;332026;332027 332021 9 SVVVCSQLLDENLK Unmodified 1602.8287 0.8287075 4049 Q99707 MTR Methionine synthase yes yes 0 0 0 By MS/MS 2 0 1 1 80.816 76.111 2 1.7732E-18 94659 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 144.65 126.78 105000000 0 105000000 0 0 0 0 0 0 0 0 0 0 0 0 0 50194 4049 45051 420906 332028 332028 1 SVVYQQSSK Unmodified 1024.5189 0.51892433 2439 Q14694 USP10 Ubiquitin carboxyl-terminal hydrolase 10 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 13.008 13.183 2 0.020004 12425 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 53.493 29.521 12960000 0 0 0 0 869630 1337600 1602900 0 0 2434400 2824200 2288900 0 0 1602300 50195 2439 45052 420907;420908;420909;420910;420911;420912;420913 332029;332030;332031;332032 332029 4 SVWGSLAVQNSPK Unmodified 1371.7147 0.71466402 1075 P18615 NELFE Negative elongation factor E yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69.48 68.532 2 2.9511E-08 77711 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.06 78.329 197530000 62697000 2856600 2498400 6386900 6853600 8304400 8261800 6008700 9974000 11504000 14072000 15054000 9959400 9030400 24065000 50196 1075 45053 420914;420915;420916;420917;420918;420919;420920;420921;420922;420923;420924;420925;420926;420927;420928 332033;332034;332035;332036;332037;332038;332039;332040;332041;332042;332043;332044;332045;332046;332047 332036 15 SVWVWEVDEEDEYECVSVLNSHTQDVK Unmodified 3280.4507 0.45065293 575 O76071 CIAO1 Probable cytosolic iron-sulfur protein assembly protein CIAO1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 93.171 87.343 3 3.0833E-39 111295 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 100.27 99.622 37942000 37942000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50197 575 45054 420929;420930 332048;332049;332050 332050 3 SVYENDVLEQLK Unmodified 1435.7195 0.71947463 3942 Q96P16 RPRD1A Regulation of nuclear pre-mRNA domain-containing protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 75.353 75.264 2 0.0014891 86869 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 83.438 59.216 24545000 0 0 0 2164100 4832700 0 6566700 6494200 0 0 0 0 4487300 0 0 50198 3942 45055 420931;420932;420933;420934;420935;420936;420937 332051;332052;332053;332054;332055;332056;332057;332058 332051 8 SVYGGEFIQQLK Unmodified 1367.7085 0.70851601 4569 Q9NQG5 RPRD1B Regulation of nuclear pre-mRNA domain-containing protein 1B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.371 76.429 2 0.0001003 87366 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 105.4 83.933 201710000 0 0 0 6151700 10322000 11658000 10821000 20424000 13131000 17942000 20413000 36711000 18003000 12734000 23398000 50199 4569 45056 420938;420939;420940;420941;420942;420943;420944;420945;420946;420947;420948;420949 332059;332060;332061;332062;332063;332064;332065;332066;332067;332068;332069;332070;332071;332072;332073 332069 15 SVYLGTGCGK Unmodified 1040.4961 0.4960804 4733 Q9NXV6 CDKN2AIP CDKN2A-interacting protein yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 32.351 27.844 2 0.0025453 36454 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.56 66.005 51111000 0 51111000 0 0 0 0 0 0 0 0 0 0 0 0 0 50200 4733 45057 420950;420951 332074 332074 1 SVYQLLSENPPDGER Unmodified 1702.8162 0.81622856 3839 Q96FV9 THOC1 THO complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 74.096 74.142 2 1.185E-18 84922 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 105.65 82.963 89026000 0 0 0 3747400 4302300 9170300 4988900 6283900 7096600 8333100 0 12251000 8635300 8991400 15226000 50201 3839 45058 420952;420953;420954;420955;420956;420957;420958;420959;420960;420961;420962 332075;332076;332077;332078;332079;332080;332081;332082;332083;332084;332085 332078 11 SVYQLLSENPPDGERFSK Unmodified 2065.0116 0.011633904 3839 Q96FV9 THOC1 THO complex subunit 1 yes yes 0 0 1 By MS/MS 10 0 1 1 75.288 75.599 3 0.041685 86728 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.237 27.953 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50202 3839 45059 420963 332086 332086 1 SVYWENTLHTLK Unmodified 1489.7565 0.75652884 1797 P57740 NUP107 Nuclear pore complex protein Nup107 yes yes 0 0 0 By MS/MS 2 0 1 1 79.104 70.974 3 0.001218 93177 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.563 60.658 50261000 50261000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50203 1797 45060 420964 332087 332087 1 SWAQASVTHGAHGDGGR Unmodified 1692.7717 0.7716784 1546 P48634 PRRC2A Protein PRRC2A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 22.979 23.142 3 1.4234E-06 24233 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 79.837 67.045 42118000 0 0 0 2100700 0 2697300 2342000 3360500 2503800 7343400 5950300 0 9120200 6699500 0 50204 1546 45061 420965;420966;420967;420968;420969;420970;420971;420972;420973 332088;332089;332090;332091;332092;332093;332094 332094 6 SWCPDCVQAEPVVR Unmodified 1701.7603 0.76031036 4106 Q9BRA2 TXNDC17 Thioredoxin domain-containing protein 17 yes yes 0 0 0 By MS/MS 2 0 1 1 71.446 65.699 2 0.024477 83467 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.172 35.531 13083000 0 13083000 0 0 0 0 0 0 0 0 0 0 0 0 0 50205 4106 45062 420974 332095 332095 1 SWCPDCVQAEPVVREGLK Unmodified 2129.0034 0.0033941785 4106 Q9BRA2 TXNDC17 Thioredoxin domain-containing protein 17 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 75.994 70.687 3 8.5172E-16 91027 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 109.04 105.38 250200000 31371000 79634000 139200000 0 0 0 0 0 0 0 0 0 0 0 0 50206 4106 45063 420975;420976;420977 332096;332097;332098;332099 332097 3 SWCQEELSVAVK Unmodified 1434.6813 0.68131498 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 73.808 69.795 2 2.5773E-05 87690 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.88 86.408 171280000 0 167350000 3925800 0 0 0 0 0 0 0 0 0 0 0 0 50207 3641 45064 420978;420979;420980 332100;332101;332102 332100 2 SWDVETATELLLSN Unmodified 1576.7621 0.76206772 1832 P61086 UBE2K Ubiquitin-conjugating enzyme E2 K yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 98.775 94.336 2 0.00082032 114183 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 94.692 87.563 136380000 36087000 91107000 9182300 0 0 0 0 0 0 0 0 0 0 0 0 50208 1832 45065 420981;420982;420983;420984;420985 332103;332104;332105;332106;332107;332108 332106 6 SWFEGQGLAGK Unmodified 1178.572 0.57202253 4387 Q9H3U1 UNC45A Protein unc-45 homolog A yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.01 1 1 8 1 1 1 1 1 1 1 1 1 1 65.711 65.023 2 0.00059139 73556 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.219 62.854 116310000 0 5998700 20295000 0 5199200 0 0 7121200 0 13418000 13775000 11966000 7944700 12027000 18565000 50209 4387 45066 420986;420987;420988;420989;420990;420991;420992;420993;420994;420995 332109;332110;332111 332109 3 SWGIDCLFEK Unmodified 1253.5751 0.575059 1661 P51580 TPMT Thiopurine S-methyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 92.648 87.482 2 0.0072284 110075 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.629 79.478 22175000 3763900 17585000 825620 0 0 0 0 0 0 0 0 0 0 0 0 50210 1661 45067 420996;420997;420998 332112;332113 332112 2 SWGTELWDQFDSLDK Acetyl (Protein N-term) 1867.8265 0.8264589 2766 Q5T0N5 FNBP1L Formin-binding protein 1-like yes yes 1 0 0 By MS/MS 2 0 1 1 100.8 96.082 2 2.3225E-40 118761 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 142.19 126.06 23488000 0 23488000 0 0 0 0 0 0 0 0 0 0 0 0 0 50211 2766 45068 420999 332114 332114 1 SWHDMQTTTAYK Unmodified 1467.6453 0.64526383 2642 Q16890 TPD52L1 Tumor protein D53 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 3 21 1 1 1 1 2 2 2 2 2 2 2 2 2 2 39.268 38.805 2;3 0.00038118 42256 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 61.235 53.511 453740000 34352000 23497000 32616000 10787000 11264000 0 14970000 30488000 22964000 34611000 50830000 45071000 39885000 31136000 71269000 50212 2642 45069 421000;421001;421002;421003;421004;421005;421006;421007;421008;421009;421010;421011;421012;421013;421014;421015;421016;421017;421018;421019;421020;421021;421022;421023 332115;332116;332117;332118;332119;332120;332121;332122;332123;332124;332125;332126;332127;332128;332129;332130 332128 14 SWHDMQTTTAYK Oxidation (M) 1483.6402 0.64017845 2642 Q16890 TPD52L1 Tumor protein D53 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 2 2 1 29.233 24.616 3 7.6954E-05 34525 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.191 85.302 133630000 106390000 12251000 14994000 0 0 0 0 0 0 0 0 0 0 0 0 50213 2642 45069 421024;421025;421026;421027;421028 332131;332132;332133;332134 332132 4299 2 SWHDMQTTTAYKK Unmodified 1595.7402 0.74022685 2642 Q16890 TPD52L1 Tumor protein D53 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 30.59 30.982 3 0.00033933 33842 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 50.222 46.966 74296000 0 0 0 0 0 0 6295300 15571000 0 0 10526000 14072000 9390900 6991000 11449000 50214 2642 45070 421029;421030;421031;421032;421033;421034;421035 332135;332136;332137;332138;332139 332137 5 SWHDVQVSSAYVK Unmodified 1504.731 0.73104237 325 O43399 TPD52L2 Tumor protein D54 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.96 2.69 3 20 2 1 2 2 1 1 1 1 2 2 2 2 2 2 56.004 55.229 2;3 2.1443E-13 61627 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 139.86 122.63 516890000 45120000 0 8943900 16335000 23854000 19977000 24150000 43437000 31215000 39259000 47654000 59263000 35100000 46773000 75808000 50215 325 45071 421036;421037;421038;421039;421040;421041;421042;421043;421044;421045;421046;421047;421048;421049;421050;421051;421052;421053;421054;421055;421056;421057;421058 332140;332141;332142;332143;332144;332145;332146;332147;332148;332149;332150;332151;332152;332153;332154;332155 332144 12 SWLADVAEK Unmodified 1017.5131 0.51311067 5209 Q9Y4R8 TELO2 Telomere length regulation protein TEL2 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 65.106 65.181 2 0.021188 74739 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 52.482 10.83 22472000 0 0 0 1993000 0 3312500 2285500 0 0 3308300 4441700 3957200 0 3174100 0 50216 5209 45072 421059;421060;421061;421062;421063;421064;421065;421066 332156;332157;332158;332159;332160 332156 5 SWLFPLTK Acetyl (Protein N-term) 1032.5644 0.56441796 3434 Q8NEZ2 VPS37A Vacuolar protein sorting-associated protein 37A yes yes 1 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 98.216 98.322 2 0.011786 114476 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 51.854 40.633 14745000 0 0 0 0 939510 1064800 1386900 1408000 1139500 1952200 1487400 906780 0 1176500 3283500 50217 3434 45073 421067;421068;421069;421070;421071;421072;421073;421074;421075;421076;421077 332161;332162;332163 332161 3 SWLPQNCTLVDMK Unmodified 1590.7534 0.75343407 1135 P22234 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.12 3.89 3 1 4 1 2 1 1 1 1 1 82.442 80.204 2 1.2129E-17 101232 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 127.42 100.12 1093200000 321830000 694520000 18237000 0 0 0 0 0 0 0 5681800 6772500 0 6656000 39495000 50218 1135 45074 421078;421079;421080;421081;421082;421083;421084;421085 332164;332165;332166;332167;332168;332169;332170;332171;332172 332168 9 SWLPQNCTLVDMK Oxidation (M) 1606.7483 0.74834869 1135 P22234 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes yes 0 1 0 By MS/MS 3 0 1 1 76.665 73.187 2 2.5339E-06 87971 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 104.82 83.428 22146000 0 22146000 0 0 0 0 0 0 0 0 0 0 0 0 0 50219 1135 45074 421086 332173 332173 1629 1 SWMEGLTLQDYSEHCK Unmodified 1982.8502 0.85024758 161 O00487 PSMD14 26S proteasome non-ATPase regulatory subunit 14 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 84.487 78.05 3 1.7804E-16 98973 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.163 92.502 33836000 7447100 26389000 0 0 0 0 0 0 0 0 0 0 0 0 0 50220 161 45075 421087;421088 332174;332175 332174 2 SWMEGLTLQDYSEHCK Oxidation (M) 1998.8452 0.8451622 161 O00487 PSMD14 26S proteasome non-ATPase regulatory subunit 14 yes yes 0 1 0 By matching By MS/MS 2 0 2 1 1 74.201 70.189 3 0.0041628 85769 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 43.297 39.263 27030000 0 24396000 2634800 0 0 0 0 0 0 0 0 0 0 0 0 50221 161 45075 421089;421090 332176 332176 225 1 SWNDCLNK Unmodified 1035.4444 0.44437918 5231 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 7 3.69 1 1 3 2 1 1 1 36.692 35.004 2 0.028065 44365 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.923 69.653 102870000 0 85556000 0 0 0 2676200 0 0 0 0 4218500 0 0 0 10423000 50222 5231 45076 421091;421092;421093;421094;421095 332177;332178 332177 2 SWNGSVEILK Unmodified 1131.5924 0.59242362 2150 Q08188 TGM3 Protein-glutamine gamma-glutamyltransferase E;Protein-glutamine gamma-glutamyltransferase E 50 kDa catalytic chain;Protein-glutamine gamma-glutamyltransferase E 27 kDa non-catalytic chain yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 68.29 68.358 2 0.0063431 79221 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 65.305 31.509 140890000 0 0 0 25544000 7462700 8238500 6629600 25487000 6229300 12280000 11623000 19981000 8730100 0 8683200 50223 2150 45077 421096;421097;421098;421099;421100;421101;421102;421103;421104;421105;421106 332179;332180;332181;332182;332183 332183 5 SWPEPDQKPEPVDK Unmodified 1650.789 0.78895118 3986 Q96S82 UBL7 Ubiquitin-like protein 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.5 3.55 1 1 4 2 1 1 1 1 45.412 43.716 3 0.00039614 56518 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.614 68.344 82170000 0 49472000 0 0 3307800 8713300 2615900 0 0 0 0 0 0 0 18062000 50224 3986 45078 421107;421108;421109;421110;421111;421112 332184;332185;332186 332184 3 SWPQESNLNRK Unmodified 1357.6739 0.67386184 1463 P42695 NCAPD3 Condensin-2 complex subunit D3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 32.886 32.457 3 0.00064785 35207 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 69.672 47.897 148680000 85387000 0 0 3848600 0 7400900 5010400 0 4741700 0 8128500 10246000 6470000 6854000 10592000 50225 1463 45079 421113;421114;421115;421116;421117;421118;421119;421120;421121;421122 332187;332188;332189;332190;332191;332192;332193;332194;332195 332192 9 SWQDSERLK Unmodified 1147.5622 0.56218613 4672 Q9NVM9 ASUN Protein asunder homolog yes yes 0 0 1 By MS/MS By MS/MS 2 0 4 2 2 33.283 28.491 2;3 0.0075622 40174 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 131.06 94.041 81579000 69332000 0 12247000 0 0 0 0 0 0 0 0 0 0 0 0 50226 4672 45080 421123;421124;421125;421126 332196;332197 332196 1 SWQPVSR Unmodified 858.4348 0.43480077 3542 Q8WUF5 PPP1R13L RelA-associated inhibitor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 29.531 29.725 2 0.033465 31584 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 71.949 31.029 102720000 0 0 0 8138100 6059600 6332000 9180000 0 7420800 10132000 11680000 13241000 5884100 10706000 13945000 50227 3542 45081 421127;421128;421129;421130;421131;421132;421133;421134;421135;421136;421137 332198;332199;332200 332199 3 SWRESCDSALR Unmodified 1365.6095 0.60954702 1705 P52907 CAPZA1 F-actin-capping protein subunit alpha-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.463 29.655 3 0.00097744 32040 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 61.435 50.825 104770000 0 0 0 9832700 2578600 4571500 3799700 3391000 7003200 5843300 11876000 15633000 9671700 9313700 21256000 50228 1705 45082 421138;421139;421140;421141;421142;421143;421144;421145;421146;421147;421148;421149 332201;332202;332203;332204;332205;332206;332207;332208;332209;332210;332211 332209 11 SWSTATSPLGGERPFR Unmodified 1747.8642 0.86418181 5054 Q9UPQ0 LIMCH1 LIM and calponin homology domains-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 67.59 67.705 3 1.5399E-05 78210 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 71.692 62.112 54356000 0 0 0 0 0 14196000 4771000 10243000 11775000 0 0 0 13372000 0 0 50229 5054 45083 421150;421151;421152;421153;421154;421155 332212;332213;332214;332215;332216;332217;332218 332218 7 SWTAADMAAQTTK Unmodified 1380.6344 0.63436479 754 P01891;P10316;P01892 HLA-A HLA class I histocompatibility antigen, A-68 alpha chain;HLA class I histocompatibility antigen, A-69 alpha chain;HLA class I histocompatibility antigen, A-2 alpha chain yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 2 1 1 1 1 1 1 1 51.859 51.995 2 0.012777 57953 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.98 41.313 54728000 0 0 0 0 7310600 6076100 3624900 0 5590400 5960000 3654500 11997000 0 0 10515000 50230 754 45084 421156;421157;421158;421159;421160;421161;421162;421163;421164 332219;332220 332219 2 SWTAADTAAQITQR Unmodified 1518.7427 0.74266969 1281;753 P01889;P30460;P30480;Q04826;Q29963;Q07000;P30508;P30501;P10321;Q31612;P30505 HLA-B;HLA-C HLA class I histocompatibility antigen, B-7 alpha chain;HLA class I histocompatibility antigen, B-8 alpha chain;HLA class I histocompatibility antigen, B-42 alpha chain;HLA class I histocompatibility antigen, B-40 alpha chain;HLA class I histocompatibility antigen, Cw-6 alpha chain;HLA class I histocompatibility antigen, Cw-15 alpha chain;HLA class I histocompatibility antigen, Cw-12 alpha chain;HLA class I histocompatibility antigen, Cw-2 alpha chain;HLA class I histocompatibility antigen, Cw-7 alpha chain;HLA class I histocompatibility antigen, B-73 alpha chain;HLA class I histocompatibility antigen, Cw-8 alpha chain no no 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 62.603 62.52 2 0.0020223 71455 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 52.693 29.264 6492900 0 0 0 0 1886100 0 0 0 0 0 4606800 0 0 0 0 50231 753;1281 45085 421165;421166 332221;332222 332221 1 SWTAADTAAQITQRK Unmodified 1646.8376 0.8376327 1281;753 P01889;P30460;P30480;Q04826;Q29963;Q07000;P30508;P30501;P10321;Q31612;P30505 HLA-B;HLA-C HLA class I histocompatibility antigen, B-7 alpha chain;HLA class I histocompatibility antigen, B-8 alpha chain;HLA class I histocompatibility antigen, B-42 alpha chain;HLA class I histocompatibility antigen, B-40 alpha chain;HLA class I histocompatibility antigen, Cw-6 alpha chain;HLA class I histocompatibility antigen, Cw-15 alpha chain;HLA class I histocompatibility antigen, Cw-12 alpha chain;HLA class I histocompatibility antigen, Cw-2 alpha chain;HLA class I histocompatibility antigen, Cw-7 alpha chain;HLA class I histocompatibility antigen, B-73 alpha chain;HLA class I histocompatibility antigen, Cw-8 alpha chain no no 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 56.133 56.347 3 0.0015789 64269 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 44.925 40.445 9578100 0 0 0 0 0 0 0 0 0 0 0 0 4671000 4907000 0 50232 753;1281 45086 421167;421168 332223;332224 332224 2 SWTSSSSLSDTYEPNYGTVK Unmodified 2207.9859 0.98587266 3520 Q8TEU7 RAPGEF6 Rap guanine nucleotide exchange factor 6 yes yes 0 0 0 By MS/MS 2 0 1 1 74.444 69.288 2 1.5368E-12 87118 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.01 108.58 35561000 0 35561000 0 0 0 0 0 0 0 0 0 0 0 0 0 50233 3520 45087 421169 332225 332225 1 SWTVEDLQK Unmodified 1104.5451 0.54513908 2227 Q13043 STK4 Serine/threonine-protein kinase 4;Serine/threonine-protein kinase 4 37kDa subunit;Serine/threonine-protein kinase 4 18kDa subunit yes yes 0 0 0 By MS/MS 2 0 1 1 66.216 60.298 2 0.015812 77059 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.684 63.319 30649000 0 30649000 0 0 0 0 0 0 0 0 0 0 0 0 0 50234 2227 45088 421170 332226 332226 1 SWVGFSGGQHHTVCMDSEGK Unmodified 2204.9368 0.93677118 1078 P18754 RCC1 Regulator of chromosome condensation yes yes 0 0 0 By MS/MS 2 0 1 1 64.641 56.362 4 0.0059729 75847 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 22.936 21.318 6759900 6759900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50235 1078 45089 421171 332227 332227 1 SWVNQMESQTGEASK Oxidation (M) 1696.7363 0.73626368 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.69 2.88 3 2 24 1 3 1 2 2 2 2 2 2 2 2 2 2 2 2 31.857 31.2 2 9.2356E-91 39287 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 211.26 193.83 453020000 3470700 152340000 1627300 26216000 18786000 35387000 20556000 13517000 21085000 28968000 29955000 33095000 25576000 16941000 25502000 50236 1518 45090 421172;421173;421174;421175;421176;421177;421178;421179;421180;421181;421182;421183;421184;421185;421186;421187;421188;421189;421190;421191;421192;421193;421194;421195;421196;421197;421198;421199;421200 332228;332229;332230;332231;332232;332233;332234;332235;332236;332237;332238;332239;332240;332241;332242;332243;332244;332245;332246;332247;332248;332249;332250;332251;332252;332253;332254 332235 2410 23 SWVNQMESQTGEASK Unmodified 1680.7413 0.74134906 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 57.898 56.568 2 1.9614E-112 63656 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 237.49 210.98 1801100000 13610000 972230000 8940100 50886000 59273000 87632000 43631000 40603000 49929000 65410000 95417000 53705000 88933000 64072000 106840000 50237 1518 45090 421201;421202;421203;421204;421205;421206;421207;421208;421209;421210;421211;421212;421213;421214;421215;421216 332255;332256;332257;332258;332259;332260;332261;332262;332263;332264;332265;332266;332267;332268;332269;332270;332271 332267 16 SWVQCGISMK Unmodified 1194.5525 0.55254942 3041 Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 0 0 0 By MS/MS 10 0 1 1 60.825 61.405 2 0.028845 69369 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.433 36.302 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50238 3041 45091 421217 332272 332272 1 SWVQCGISMK Oxidation (M) 1210.5475 0.54746404 3041 Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 0 1 0 By MS/MS 2 0 1 1 52.658 44.643 2 0.016653 61463 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.305 40.382 20365000 20365000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50239 3041 45091 421218 332273;332274 332274 4663 2 SYAEKPDEITK Acetyl (Protein N-term) 1321.6402 0.64016167 4702 Q9NWU2 GID8 Glucose-induced degradation protein 8 homolog yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 38.136 38.358 2 0.00035786 41490 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.946 76.642 58770000 0 0 0 0 2849100 7324700 0 0 0 8473000 8462500 0 7360800 9098200 15202000 50240 4702 45092 421219;421220;421221;421222;421223;421224;421225;421226 332275;332276;332277;332278;332279;332280 332276 6 SYAEKPDEITKDEWMEK Acetyl (Protein N-term) 2139.9671 0.96705148 4702 Q9NWU2 GID8 Glucose-induced degradation protein 8 homolog yes yes 1 0 2 By MS/MS 2 0 1 1 72.771 67.226 3 2.4336E-05 84975 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.918 67.069 40771000 0 40771000 0 0 0 0 0 0 0 0 0 0 0 0 0 50241 4702 45093 421227 332281 332281 1 SYASTPELRK Unmodified 1150.5982 0.59823728 4258;2735 Q9BZ29;Q5JSL3 DOCK9;DOCK11 Dedicator of cytokinesis protein 9;Dedicator of cytokinesis protein 11 no no 0 0 1 By MS/MS 2 0 1 1 30.922 25.203 3 0.028284 35303 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.77 28.509 41792000 41792000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50242 4258;2735 45094 421228 332282 332282 1 SYAVSSSVLHGIEPR Unmodified 1600.8209 0.82092001 469 O75170 PPP6R2 Serine/threonine-protein phosphatase 6 regulatory subunit 2 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 67.543 67.782 3 0.00084416 77123 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.723 32.846 12366000 0 0 0 0 0 6056900 0 0 0 0 0 0 0 0 6308900 50243 469 45095 421229;421230;421231 332283;332284 332283 2 SYCAEIAHNVSSK Unmodified 1464.6667 0.66672755 1928 P62910 RPL32 60S ribosomal protein L32 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 5.2 3.92 6 4 2 2 2 1 1 1 1 38.97 35.965 2;3 0.00073563 49294 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 92.295 85.859 408720000 217290000 95667000 63036000 0 4484200 0 0 0 0 0 8963000 0 8467300 10815000 0 50244 1928 45096 421232;421233;421234;421235;421236;421237;421238;421239;421240;421241 332285;332286;332287;332288;332289 332286 3 SYCNDQSTGDIK Unmodified 1386.5722 0.57215846 729 P00492 HPRT1 Hypoxanthine-guanine phosphoribosyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.34 1 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 25.636 25.574 2 1.6226E-14 92886 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 143.89 135.03 208580000 53576000 66832000 0 4446200 2132500 5244200 2814100 3330100 1867600 5368500 12343000 13777000 3373100 10427000 23049000 50245 729 45097 421242;421243;421244;421245;421246;421247;421248;421249;421250;421251;421252;421253;421254;421255;421256 332290;332291;332292;332293;332294;332295;332296;332297;332298;332299;332300;332301;332302;332303;332304 332296 15 SYDFEFMQVEK Oxidation (M) 1437.6122 0.61223236 498 O75436 VPS26A Vacuolar protein sorting-associated protein 26A yes yes 0 1 0 By MS/MS 10 0 1 1 69.698 70.164 2 0.0080873 80088 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.706 39.485 3470900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3470900 50246 498 45098 421257 332305 332305 649 1 SYDFEFMQVEK Unmodified 1421.6173 0.61731774 498 O75436 VPS26A Vacuolar protein sorting-associated protein 26A yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 80.344 80.557 2 0.013001 92766 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.167 56.58 19019000 0 0 0 0 0 0 0 0 0 0 4442100 0 0 0 14576000 50247 498 45098 421258;421259 332306 332306 1 SYDRAITVFSPDGHLFQVEYAQEAVK Acetyl (Protein N-term) 3011.4665 0.46650141 219 O14818 PSMA7 Proteasome subunit alpha type-7 yes yes 1 0 1 By MS/MS 2 0 1 1 96.288 88.157 3 2.352E-79 113895 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 138.92 126.72 22239000 22239000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50248 219 45099 421260 332307 332307 1 SYDVPPPPMEPDHPFYSNISK Oxidation (M) 2432.0995 0.099462633 1077 P18669;Q8N0Y7 PGAM1;PGAM4 Phosphoglycerate mutase 1;Probable phosphoglycerate mutase 4 yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 2 72.061 72.16 2;3 1.402E-06 83631 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 62.684 58.702 742880000 0 0 0 13293000 13750000 0 0 16070000 13631000 32121000 104210000 152020000 0 91014000 306780000 50249 1077 45100 421261;421262;421263;421264;421265;421266;421267;421268;421269;421270 332308;332309;332310;332311;332312;332313;332314;332315;332316;332317;332318 332317 1554 11 SYDVPPPPMEPDHPFYSNISK Unmodified 2416.1045 0.10454801 1077 P18669;Q8N0Y7 PGAM1;PGAM4 Phosphoglycerate mutase 1;Probable phosphoglycerate mutase 4 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.7 3.52 2 1 7 2 1 1 1 1 1 1 2 78.349 77.421 2;3 1.5561E-08 96255 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.448 64.506 327400000 0 57775000 3390100 0 0 0 0 7392900 0 6400200 21011000 27978000 0 21109000 182350000 50250 1077 45100 421271;421272;421273;421274;421275;421276;421277;421278;421279;421280 332319;332320;332321;332322;332323;332324;332325;332326;332327;332328;332329 332321 9 SYDYDLIIIGGGSGGLAAAK Unmodified 1939.9891 0.98910755 2641 Q16881 TXNRD1 Thioredoxin reductase 1, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 2 1 1 91.562 87.922 2 2.8523E-09 109273 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.83 99.936 60961000 38312000 18365000 4283200 0 0 0 0 0 0 0 0 0 0 0 0 50251 2641 45101 421281;421282;421283;421284 332330;332331;332332 332330 3 SYDYEAWAK Unmodified 1131.4873 0.48728985 4425 Q9H6T3 RPAP3 RNA polymerase II-associated protein 3 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 56.978 57.288 2 0.030157 65258 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 48.283 37.591 28204000 0 0 0 0 0 0 2331800 2442500 1819600 3645500 4858400 3545900 0 0 9560100 50252 4425 45102 421285;421286;421287;421288;421289;421290;421291 332333;332334;332335 332333 3 SYEAFYAR Unmodified 1005.4556 0.45559579 4288 Q9C0D5 TANC1 Protein TANC1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 45.785 45.967 2 0.03661 51396 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 51.787 26.337 72735000 0 0 0 4115600 5708800 0 5648500 6020100 0 7637800 9763300 11256000 7617300 4392300 10575000 50253 4288 45103 421292;421293;421294;421295;421296;421297;421298;421299;421300;421301 332336 332336 1 SYEAQDPEIASLSGK Unmodified 1593.7522 0.75223132 4037 Q99622 C12orf57 Protein C10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 58.455 57.937 2 6.3073E-20 66003 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 112.51 101.29 158720000 5192800 0 0 0 10148000 12515000 12537000 10168000 8892000 12763000 15790000 15641000 11298000 13114000 30664000 50254 4037 45104 421302;421303;421304;421305;421306;421307;421308;421309;421310;421311;421312;421313 332337;332338;332339;332340;332341;332342;332343;332344;332345;332346;332347;332348;332349;332350;332351;332352 332347 16 SYEAYYAR Unmodified 1021.4505 0.45051041 4511 Q9HCD6 TANC2 Protein TANC2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 33.759 33.916 2 0.043141 37082 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 49.358 41.127 22394000 0 0 0 0 2663400 2032200 1900600 4332900 1475300 0 6572500 0 0 0 3417100 50255 4511 45105 421314;421315;421316;421317;421318;421319;421320 332353 332353 1 SYEDDVEELGLNFTVVNNDLGEAQVVELK Unmodified 3237.5565 0.55649821 2525 Q15386 UBE3C Ubiquitin-protein ligase E3C yes yes 0 0 0 By MS/MS 2 0 1 1 98.465 90.334 3 0.00027755 116554 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.044 37.73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50256 2525 45106 421321 332354 332354 1 SYEGEEDTPMGLLLGGVK Unmodified 1893.903 0.90299466 3903 Q96K76 USP47 Ubiquitin carboxyl-terminal hydrolase 47 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 92.425 92.551 2 1.5235E-05 107331 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.401 89.795 5677200 0 0 0 0 0 0 0 0 0 0 0 1123000 0 0 4554200 50257 3903 45107 421322;421323 332355 332355 1 SYELPDGQVITIGNER Unmodified 1789.8846 0.88464248 1951;1815;1958;2711 P60709;Q6S8J3;A5A3E0;Q9BYX7;P63261;P68032;P63267;P68133;P62736;Q562R1 ACTB;POTEE;POTEF;POTEKP;ACTG1;ACTC1;ACTG2;ACTA1;ACTA2;ACTBL2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, aortic smooth muscle;Beta-actin-like protein 2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.24 2.3 6 2 74 3 3 2 5 7 6 5 6 7 6 7 6 7 6 6 80.336 80.119 2;3 5.2265E-29 93453 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 167.14 144.67 73246000000 19971000 174120000 5120200 2155600000 4312200000 6772900000 3839800000 4723200000 4753000000 7220100000 7074200000 10209000000 4764800000 5245400000 11977000000 50258 1815;1951;1958;2711 45108 421324;421325;421326;421327;421328;421329;421330;421331;421332;421333;421334;421335;421336;421337;421338;421339;421340;421341;421342;421343;421344;421345;421346;421347;421348;421349;421350;421351;421352;421353;421354;421355;421356;421357;421358;421359;421360;421361;421362;421363;421364;421365;421366;421367;421368;421369;421370;421371;421372;421373;421374;421375;421376;421377;421378;421379;421380;421381;421382;421383;421384;421385;421386;421387;421388;421389;421390;421391;421392;421393;421394;421395;421396;421397;421398;421399;421400;421401;421402;421403;421404;421405 332356;332357;332358;332359;332360;332361;332362;332363;332364;332365;332366;332367;332368;332369;332370;332371;332372;332373;332374;332375;332376;332377;332378;332379;332380;332381;332382;332383;332384;332385;332386;332387;332388;332389;332390;332391;332392;332393;332394;332395;332396;332397;332398;332399;332400;332401;332402;332403;332404;332405;332406;332407;332408;332409;332410;332411;332412;332413;332414;332415;332416;332417;332418;332419;332420;332421;332422;332423;332424;332425;332426;332427;332428;332429;332430;332431;332432;332433;332434;332435;332436;332437;332438;332439;332440 332381 76 SYENELDPLK Unmodified 1206.5768 0.57683314 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 62.735 61.417 2 0.00053101 77914 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.44 100.75 760300000 11559000 500810000 2404000 14180000 15580000 20337000 23193000 18630000 14634000 27587000 33144000 32822000 0 0 45416000 50259 3676 45109 421406;421407;421408;421409;421410;421411;421412;421413;421414;421415;421416;421417;421418 332441;332442;332443;332444;332445;332446;332447;332448;332449;332450;332451 332444 7 SYENQKPPFDAK Unmodified 1422.6779 0.67794416 1039 P16435 POR NADPH--cytochrome P450 reductase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.7 1.43 1 22 1 2 2 2 2 1 2 2 2 2 2 1 2 34.287 34.256 2;3 0.00027215 36576 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 80.555 72.93 395460000 0 17008000 0 26346000 25157000 18730000 24943000 20771000 23756000 33129000 46145000 52615000 33507000 28570000 44778000 50260 1039 45110 421419;421420;421421;421422;421423;421424;421425;421426;421427;421428;421429;421430;421431;421432;421433;421434;421435;421436;421437;421438;421439;421440;421441 332452;332453;332454;332455;332456;332457;332458;332459;332460;332461;332462;332463;332464;332465;332466;332467;332468;332469;332470 332464 19 SYENVDSGDK Unmodified 1112.4622 0.46219731 700 O95835 LATS1 Serine/threonine-protein kinase LATS1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 13.036 13.114 2 0.010028 11864 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 56.729 51.744 11020000 0 0 0 1833600 0 2526200 0 2465500 2060900 0 0 0 0 2133400 0 50261 700 45111 421442;421443;421444;421445;421446;421447;421448 332471;332472;332473;332474;332475;332476 332473 6 SYEPLEDPGVK Unmodified 1232.5925 0.5924832 1392 P37837 TALDO1 Transaldolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 6.27 4.02 2 3 2 8 3 3 1 1 1 1 1 1 1 1 1 54.469 52.922 2 0.0042217 64110 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.692 40.142 4101500000 116810000 3598100000 8381100 31578000 7342500 0 8613900 11386000 0 0 57643000 61702000 0 47603000 152350000 50262 1392 45112 421449;421450;421451;421452;421453;421454;421455;421456;421457;421458;421459;421460;421461;421462;421463 332477;332478;332479;332480;332481;332482;332483;332484;332485;332486;332487;332488;332489;332490 332483 13 SYESLFIR Unmodified 1013.5182 0.51819605 536 O75718 CRTAP Cartilage-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 72.805 73.065 2 0.010604 83499 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.116 46.646 11859000 0 0 0 0 0 0 3004400 0 0 0 0 0 0 0 8854900 50263 536 45113 421464;421465;421466 332491;332492 332491 2 SYESQIEVMAAEVAK Oxidation (M) 1669.7869 0.78690227 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 4 3.23 5 2 2 5 2 1 1 74.941 71.915 2;3 2.9551E-12 90025 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.2 99.336 169790000 0 158930000 3106800 0 0 3836300 0 0 0 3915100 0 0 0 0 0 50264 643 45114 421467;421468;421469;421470;421471;421472;421473;421474;421475 332493;332494;332495;332496;332497;332498 332497 781 5 SYESQIEVMAAEVAK Unmodified 1653.792 0.79198764 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.29 2.76 5 1 1 1 3 2 1 89.083 85.389 2;3 5.5862E-16 107372 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 118.87 97.715 560630000 9237400 537810000 7043300 0 0 0 0 0 0 0 0 0 0 0 6540800 50265 643 45114 421476;421477;421478;421479;421480;421481;421482 332499;332500;332501;332502;332503;332504;332505 332504 6 SYESSEDCSEAAGSPARK Unmodified 1929.801 0.80104878 2939 Q6P6C2 ALKBH5 RNA demethylase ALKBH5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 16.934 16.824 3 4.4035E-05 21272 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.311 68.676 46130000 0 12419000 0 1619800 2412400 2149100 4556900 2632700 1548800 2177800 3039300 3530900 2285200 3674500 4083300 50266 2939 45115 421483;421484;421485;421486;421487;421488;421489;421490;421491;421492;421493;421494;421495 332506;332507;332508;332509;332510;332511;332512;332513 332507 8 SYFLIVR Unmodified 896.51199 0.51198846 154 O00429 DNM1L Dynamin-1-like protein yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.174 76.236 2 0.023669 87902 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 84.359 47.772 144990000 0 0 0 8419900 7450100 17974000 10734000 10075000 8771200 16298000 7652000 18557000 10057000 10419000 18578000 50267 154 45116 421496;421497;421498;421499;421500;421501;421502;421503;421504;421505;421506;421507 332514;332515;332516;332517;332518;332519 332514 6 SYGATATSPGER Unmodified 1195.5469 0.54692999 3478 Q8TB61 SLC35B2 Adenosine 3'-phospho 5'-phosphosulfate transporter 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 17.287 17.56 2 2.3636E-05 17483 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 102.06 80.598 47451000 0 0 0 0 0 3856000 3950600 0 1161300 5405000 4387200 8803500 6237000 5894500 7755800 50268 3478 45117 421508;421509;421510;421511;421512;421513;421514;421515;421516 332520;332521;332522;332523;332524;332525 332525 6 SYGGYEVVGGSSDSYLVPGMTYSK Unmodified 2502.1261 0.12607131 2541 Q15517 CDSN Corneodesmosin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.86 2.8 1 6 1 2 2 1 1 82.997 82.447 2;3 2.4948E-15 101136 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.82 108.4 47970000 0 19009000 0 0 0 0 0 11666000 0 7902600 0 4114400 0 0 5277500 50269 2541 45118 421517;421518;421519;421520;421521;421522;421523 332526;332527;332528;332529;332530 332527 5 SYGGYEVVGGSSDSYLVPGMTYSK Oxidation (M) 2518.121 0.12098594 2541 Q15517 CDSN Corneodesmosin yes yes 0 1 0 By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 77.579 77.606 2 1.5663E-44 89742 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 109.1 105.92 178050000 0 0 0 11751000 14219000 12539000 0 37442000 10766000 24153000 21541000 29089000 10507000 6047400 0 50270 2541 45118 421524;421525;421526;421527;421528;421529;421530;421531;421532;421533;421534 332531;332532;332533;332534;332535 332535 4181 5 SYGHTFEK Unmodified 967.43995 0.43994572 5276 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 17.992 14.5 2 0.004881 21448 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 146.27 85.305 95142000 76132000 0 19009000 0 0 0 0 0 0 0 0 0 0 0 0 50271 5276 45119 421535;421536 332536;332537 332536 2 SYGIPFIETSAK Unmodified 1311.6711 0.67106787 744 P01111;P01116 NRAS;KRAS GTPase NRas;GTPase KRas;GTPase KRas, N-terminally processed yes no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 82.176 81.144 2 0.00076405 93879 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.841 51.77 498120000 12070000 340440000 0 4618700 9857000 0 10540000 12168000 0 15616000 19503000 21037000 10788000 14695000 26787000 50272 744 45120 421537;421538;421539;421540;421541;421542;421543;421544;421545;421546;421547;421548 332538;332539;332540;332541;332542;332543;332544;332545;332546;332547;332548 332540 9 SYGLGSEQR Unmodified 995.46722 0.46722311 4371 Q9H2P0 ADNP Activity-dependent neuroprotector homeobox protein yes yes 0 0 0 By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 23.196 23.461 2 0.039051 24657 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 44.719 22.948 99387000 0 0 0 0 0 6244000 9611800 0 4671300 12153000 16355000 0 21292000 11168000 17891000 50273 4371 45121 421549;421550;421551;421552;421553;421554;421555;421556 332549 332549 1 SYGPAPGAGHVQEESNLSLQALESR Unmodified 2596.2518 0.25175761 2244 Q13155 AIMP2 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 74.788 74.993 3 0.00042794 86435 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 31.17 17.154 22586000 0 0 0 0 0 0 0 0 0 7790500 0 0 0 0 14796000 50274 2244 45122 421557;421558 332550 332550 1 SYGRPPPDVEGMTSLK Acetyl (Protein N-term);Oxidation (M) 1790.8509 0.85089951 2050 Q01130 SRSF2 Serine/arginine-rich splicing factor 2 yes yes 1 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 56.228 54.971 2 1.2492E-66 68905 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 187.63 154.54 705740000 7578000 230920000 0 28728000 31884000 33685000 42560000 25988000 41078000 40386000 56064000 73449000 40887000 0 52526000 50275 2050 45123 421559;421560;421561;421562;421563;421564;421565;421566;421567;421568;421569;421570;421571;421572 332551;332552;332553;332554;332555;332556;332557;332558;332559;332560;332561;332562;332563;332564;332565;332566;332567;332568;332569;332570;332571;332572;332573 332557 3334 23 SYGRPPPDVEGMTSLK Acetyl (Protein N-term) 1774.856 0.85598488 2050 Q01130 SRSF2 Serine/arginine-rich splicing factor 2 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 4 2 12 1 4 1 1 1 1 1 1 1 1 1 1 1 1 1 72.982 71.454 2;3 1.5955E-27 81886 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 135.58 101.2 1638000000 23980000 1044600000 5947800 24751000 31086000 29911000 34117000 37955000 27272000 49096000 64343000 61639000 35959000 49025000 118360000 50276 2050 45123 421573;421574;421575;421576;421577;421578;421579;421580;421581;421582;421583;421584;421585;421586;421587;421588;421589;421590 332574;332575;332576;332577;332578;332579;332580;332581;332582;332583;332584;332585;332586;332587;332588;332589;332590;332591;332592;332593;332594;332595;332596;332597;332598;332599;332600;332601 332582 27 SYHEEFNPPK Unmodified 1246.5619 0.56185177 1748 P54819 AK2 Adenylate kinase 2, mitochondrial;Adenylate kinase 2, mitochondrial, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.3 2.25 2 21 1 1 1 1 2 2 2 2 2 2 2 1 2 2 32.899 32.75 2;3 0.0019539 34647 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 97.431 87.468 264690000 0 20718000 11446000 7986500 6901100 23370000 17936000 17011000 16469000 26112000 27902000 21999000 15202000 17731000 33906000 50277 1748 45124 421591;421592;421593;421594;421595;421596;421597;421598;421599;421600;421601;421602;421603;421604;421605;421606;421607;421608;421609;421610;421611;421612;421613 332602;332603;332604;332605;332606;332607;332608 332605 5 SYIEYQLTPTNTNR Unmodified 1698.8213 0.82131394 5252 Q9Y5X1 SNX9 Sorting nexin-9 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 64.241 64.361 2 1.6356E-06 73560 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 118.4 103.71 31600000 0 0 0 0 1675100 4854800 0 0 0 0 5715300 0 3447400 4397500 11509000 50278 5252 45125 421614;421615;421616;421617;421618;421619;421620;421621;421622;421623 332609;332610;332611;332612;332613;332614;332615;332616;332617 332617 9 SYIPGQPVTAVVQR Acetyl (Protein N-term) 1555.8358 0.83584179 225 O14907 TAX1BP3 Tax1-binding protein 3 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 80.545 80.601 2 0.0006183 93215 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 58.37 47.998 28286000 0 0 0 0 1334200 4212600 0 0 0 0 4931700 0 0 4314300 13493000 50279 225 45126 421624;421625;421626;421627;421628 332618;332619;332620;332621 332618 4 SYIQGGRPFTK Unmodified 1252.6564 0.65642086 690 O95785 WIZ Protein Wiz yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.489 36.669 3 0.01091 39355 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 44.425 25.819 132970000 0 0 0 8458700 7134900 9808100 8610200 8844800 8667900 12967000 8556100 16638000 13777000 12163000 17347000 50280 690 45127 421629;421630;421631;421632;421633;421634;421635;421636;421637;421638;421639;421640 332622;332623 332622 2 SYIRESGK Unmodified 938.48214 0.48214489 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 10.965 7.8335 2 0.043853 11997 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 138.4 77.038 394460000 364210000 18436000 11816000 0 0 0 0 0 0 0 0 0 0 0 0 50281 2392 45128 421641;421642;421643 332624 332624 1 SYISEETR Unmodified 983.45599 0.45598972 2647 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.602 23.807 2 0.028474 24769 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 56.721 44.514 170130000 0 0 0 10290000 10232000 15245000 10743000 11455000 10067000 16233000 13413000 20273000 15673000 15203000 21306000 50282 2647 45129 421644;421645;421646;421647;421648;421649;421650;421651;421652;421653;421654;421655 332625;332626;332627;332628;332629;332630;332631 332630 6 SYIYSGSHDGHINYWDSETGENDSFAGK Unmodified 3135.3119 0.31185126 453 O75083 WDR1 WD repeat-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2.67 0.471 1 2 2 1 75.113 69.818 3;4 0.0073562 84888 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 26.13 24.15 17806000 13314000 4492100 0 0 0 0 0 0 0 0 0 0 0 0 0 50283 453 45130 421656;421657;421658 332632;332633 332632 2 SYLAQFAAR Unmodified 1025.5294 0.52942943 1974 P78344 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.27 60.375 2 0.0035848 69307 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 102.77 89.725 1081800000 0 0 0 43270000 56121000 73954000 88343000 102820000 54947000 92317000 100710000 131190000 92936000 101050000 144150000 50284 1974 45131 421659;421660;421661;421662;421663;421664;421665;421666;421667;421668;421669;421670 332634;332635;332636;332637;332638;332639;332640;332641;332642;332643;332644;332645;332646;332647;332648;332649;332650;332651;332652 332652 19 SYLDNFIK Unmodified 998.5073 0.50729701 714 O96013 PAK4 Serine/threonine-protein kinase PAK 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.449 76.507 2 0.022922 88348 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 60.76 17.636 46864000 0 0 0 1998300 2578800 3837500 3669200 3204700 2296800 4462000 5229700 4356800 2656300 3420700 9153500 50285 714 45132 421671;421672;421673;421674;421675;421676;421677;421678;421679;421680;421681;421682 332653;332654;332655;332656;332657;332658;332659;332660 332653 8 SYLEGSSDNQLK Unmodified 1339.6256 0.62557424 4902 Q9UHI6 DDX20 Probable ATP-dependent RNA helicase DDX20 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 36.713 37.063 2 0.0063596 40983 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 51.436 36.742 17370000 0 0 0 0 0 2888100 0 0 0 0 0 6962900 4880900 2637600 0 50286 4902 45133 421683;421684;421685;421686 332661;332662;332663 332662 3 SYLERSVK Unmodified 980.5291 0.52909508 446 O60925 PFDN1 Prefoldin subunit 1 yes yes 0 0 1 By MS/MS 2 0 1 1 24.755 19.678 2 0.032083 28048 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 144.12 83.362 641760000 641760000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50287 446 45134 421687 332664 332664 1 SYLLSMGIANPVTR Oxidation (M) 1536.797 0.79701344 3168 Q86VN1 VPS36 Vacuolar protein-sorting-associated protein 36 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By matching 10 0 5 1 1 1 1 1 75.969 76.098 2 0.00025008 87869 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 73.781 64.823 15046000 0 0 0 0 0 4571500 2228400 1879300 0 3732300 2634300 0 0 0 0 50288 3168 45135 421688;421689;421690;421691;421692 332665;332666;332667 332666 4784 3 SYLMTNYESAPPSPQYK Oxidation (M) 1990.8982 0.89824363 476 O75223 GGCT Gamma-glutamylcyclotransferase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 60.82 60.418 2 3.4672E-29 69453 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 117.23 109.32 93547000 0 17523000 0 22532000 3000000 2838500 4478200 8188200 0 3609900 5901500 9110100 4519900 4531800 7314800 50289 476 45136 421693;421694;421695;421696;421697;421698;421699;421700;421701;421702;421703;421704 332668;332669;332670;332671;332672;332673;332674;332675;332676 332675 599 8 SYLMTNYESAPPSPQYK Unmodified 1974.9033 0.90332901 476 O75223 GGCT Gamma-glutamylcyclotransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 70.124 68.109 2 2.9258E-08 78226 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 101.6 88.167 88720000 0 72226000 0 14023000 0 0 0 0 2470600 0 0 0 0 0 0 50290 476 45136 421705;421706;421707;421708;421709;421710 332677;332678;332679;332680;332681 332679 5 SYLMTNYESAPPSPQYKK Unmodified 2102.9983 0.99829203 476 O75223 GGCT Gamma-glutamylcyclotransferase yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 59.748 59.492 3 4.3341E-05 68597 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 48.883 42.761 15962000 0 0 0 8080100 0 0 0 7881500 0 0 0 0 0 0 0 50291 476 45137 421711;421712 332682;332683 332683 2 SYLMTNYESAPPSPQYKK Oxidation (M) 2118.9932 0.99320665 476 O75223 GGCT Gamma-glutamylcyclotransferase yes yes 0 1 1 By MS/MS By matching 10 0 2 1 1 52.471 52.229 3 0.0006031 59621 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 42.382 39.804 16640000 0 0 0 11948000 0 0 0 4691600 0 0 0 0 0 0 0 50292 476 45137 421713;421714 332684 332684 599 1 SYLPPPEQPSSGSLK Unmodified 1585.7988 0.79878758 2786 Q5T8P6 RBM26 RNA-binding protein 26 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.12 2.42 1 1 15 2 1 1 1 2 1 1 1 2 2 1 1 1 55.307 54.836 2 0.00010134 61469 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 73.067 56.813 333570000 0 81110000 0 14964000 15269000 18374000 32676000 19177000 15288000 19828000 24803000 31634000 20774000 15548000 24126000 50293 2786 45138 421715;421716;421717;421718;421719;421720;421721;421722;421723;421724;421725;421726;421727;421728;421729;421730;421731 332685;332686;332687;332688;332689;332690;332691;332692;332693;332694;332695;332696;332697;332698;332699;332700;332701;332702;332703;332704;332705;332706;332707;332708;332709;332710;332711;332712;332713;332714 332689 28 SYLPYPAPEGIAVSPLSLHGK Unmodified 2195.1627 0.16265524 2989 Q6W2J9 BCOR BCL-6 corepressor yes yes 0 0 0 By MS/MS 10 0 1 1 85.822 85.991 3 0.0008085 99405 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 34.346 30.146 6264300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6264300 50294 2989 45139 421732 332715 332715 1 SYLSGGAGAAGGGGADPGNK Unmodified 1662.7598 0.75977631 1190 P25490 YY1 Transcriptional repressor protein YY1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 33.777 32.864 2 2.0073E-30 43265 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 119.87 112.59 628000000 11662000 298610000 0 17343000 14950000 19655000 22890000 20348000 16694000 28623000 32815000 39318000 29180000 25644000 50267000 50295 1190 45140 421733;421734;421735;421736;421737;421738;421739;421740;421741;421742;421743;421744;421745;421746;421747 332716;332717;332718;332719;332720;332721;332722;332723;332724;332725;332726;332727;332728;332729;332730 332723 15 SYLSGMPECK Oxidation (M) 1186.4998 0.49984514 3786 Q96CW1 AP2M1 AP-2 complex subunit mu yes yes 0 1 0 By MS/MS 2 0 2 2 33.395 28.806 2 0.0028892 38002 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.034 80.652 78738000 0 78738000 0 0 0 0 0 0 0 0 0 0 0 0 0 50296 3786 45141 421748;421749 332731;332732 332732 5331 2 SYLSGMPECK Unmodified 1170.5049 0.50493052 3786 Q96CW1 AP2M1 AP-2 complex subunit mu yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.08 3.33 2 1 9 1 2 1 1 1 1 1 1 1 1 1 47.969 47.15 2 0.012994 59858 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.136 74.367 181520000 0 143940000 0 0 2626700 2888300 2884300 0 2703300 5431400 5039800 0 3633200 3399100 8977100 50297 3786 45141 421750;421751;421752;421753;421754;421755;421756;421757;421758;421759;421760;421761 332733;332734;332735;332736 332733 4 SYLSSSAPSSSPAGLDGSQQGAVPGLGPK Unmodified 2701.3195 0.31950282 4885 Q9UGP4 LIMD1 LIM domain-containing protein 1 yes yes 0 0 0 By MS/MS 3 0 1 1 77.491 74.072 3 0.00083382 88979 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 32.136 24.943 5122800 0 5122800 0 0 0 0 0 0 0 0 0 0 0 0 0 50298 4885 45142 421762 332737;332738 332738 2 SYLTPVRDEESESQRK Unmodified 1922.9334 0.93338358 232 O14974 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.632 32.816 3 0.010285 35088 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 52.522 48.554 129530000 0 0 0 6387800 6400900 13224000 11996000 10076000 9094700 9318900 11120000 17860000 9728700 9153600 15168000 50299 232 45143 421763;421764;421765;421766;421767;421768;421769;421770;421771;421772;421773;421774 332739;332740;332741;332742;332743 332742 4 SYLYFEEK Unmodified 1077.5019 0.50187728 4846 Q9UBL3 ASH2L Set1/Ash2 histone methyltransferase complex subunit ASH2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.046 61.148 2 0.0089419 69833 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 84.498 68.916 182490000 0 0 0 10952000 9499800 8791000 9561900 24969000 7665300 14040000 18217000 15734000 21406000 18582000 23071000 50300 4846 45144 421775;421776;421777;421778;421779;421780;421781;421782;421783;421784;421785;421786 332744;332745;332746;332747;332748;332749;332750;332751;332752;332753;332754;332755;332756 332751 13 SYLYFTQFK Unmodified 1195.5914 0.59136099 3717 Q969H8 MYDGF Myeloid-derived growth factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.53 2.94 1 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 81.138 80.183 2 0.0033609 92400 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.308 70.312 504920000 306640000 11908000 0 1862100 2431500 2830700 2866700 4703800 3246000 5756900 18287000 24741000 2775000 17350000 99516000 50301 3717 45145 421787;421788;421789;421790;421791;421792;421793;421794;421795;421796;421797;421798;421799;421800;421801 332757;332758;332759;332760;332761;332762;332763;332764;332765;332766;332767 332758 11 SYMAPER Oxidation (M) 868.3749 0.37490263 1373 P36507 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 12.66 12.84 2 0.034061 12162 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 60.788 17.788 82019000 0 0 0 0 5103400 12127000 8982000 262140 5249400 10124000 9336500 12294000 10236000 7927100 377510 50302 1373 45146 421802;421803;421804;421805;421806;421807;421808;421809;421810;421811;421812 332768;332769 332768 2 SYMAQMDQELAHTCISK Unmodified 2011.8802 0.8801675 705 O95905 ECD Protein SGT1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 77.759 74.01 3 1.6771E-26 92483 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.96 92.034 71603000 0 67645000 3958600 0 0 0 0 0 0 0 0 0 0 0 0 50303 705 45147 421813;421814 332770;332771 332770 2 SYMAQMDQELAHTCISK 2 Oxidation (M) 2043.87 0.86999674 705 O95905 ECD Protein SGT1 yes yes 0 2 0 By MS/MS 2 0 1 1 47.737 42.174 3 0.00029813 54931 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.83 53.62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50304 705 45147 421815 332772 332772 851;852 1 SYMELLQRNESTEK Unmodified 1726.8196 0.81959938 3489 Q8TCG1 KIAA1524 Protein CIP2A yes yes 0 0 1 By MS/MS 2 0 2 2 70.355 62.07 2;3 0.015673 82808 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.456 77.466 24852000 24852000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50305 3489 45148 421816;421817 332773;332774 332774 1 SYMIPENEFHHK Unmodified 1530.6925 0.69254837 3465 Q8NI27 THOC2 THO complex subunit 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 49.001 48.407 3 2.4523E-05 68728 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.625 68.858 85367000 22466000 0 0 0 0 8211900 0 4991100 0 4453100 8968900 7535100 8305800 6784300 13651000 50306 3465 45149 421818;421819;421820;421821;421822;421823;421824;421825;421826 332775;332776;332777;332778;332779;332780;332781 332776 6 SYMIPENEFHHK Oxidation (M) 1546.6875 0.68746299 3465 Q8NI27 THOC2 THO complex subunit 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 42.41 42.444 3 0.001377 46645 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 56.225 45.17 45973000 0 0 0 4173100 3545100 7411000 0 7719500 0 0 0 11124000 0 12000000 0 50307 3465 45149 421827;421828;421829;421830;421831;421832 332782 332782 4998 1 SYNDELQFLEK Unmodified 1384.6511 0.65106071 5168 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 77.238 76.719 2 0.00012672 88613 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 109.83 91.966 558670000 0 105940000 1223600 19165000 25652000 34783000 34446000 32795000 0 58494000 58658000 54171000 33744000 33915000 65675000 50308 5168 45150 421833;421834;421835;421836;421837;421838;421839;421840;421841;421842;421843;421844;421845 332783;332784;332785;332786;332787;332788;332789;332790;332791;332792;332793 332783 11 SYNPRTGMESLTVTPCSK Oxidation (M) 2042.9401 0.94012522 384 O60231 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 yes yes 0 1 1 By MS/MS 2 0 1 1 51.587 43.626 3 0.00024805 60009 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.203 58.989 19318000 19318000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50309 384 45151 421846 332794 332794 494 1 SYNPRTGMESLTVTPCSK Unmodified 2026.9452 0.9452106 384 O60231 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 64.696 58.667 3 1.9231E-58 78512 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 123.55 118.45 91334000 87019000 0 4315000 0 0 0 0 0 0 0 0 0 0 0 0 50310 384 45151 421847;421848 332795;332796;332797 332796 3 SYNQEHSQSFTFDDAQQEDRK Unmodified 2559.0898 0.089837238 4556 Q9NPQ8 RIC8A Synembryn-A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 41.874 42.114 4 8.8453E-07 45960 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.739 59.938 192000000 0 0 0 0 8220700 14517000 8985500 13629000 9676400 25690000 22390000 23681000 24603000 16887000 23725000 50311 4556 45152 421849;421850;421851;421852;421853;421854;421855;421856;421857;421858;421859 332798;332799;332800;332801;332802;332803;332804;332805;332806 332803 9 SYNRFQIATVTEK Unmodified 1555.7995 0.79945628 1229 P28070 PSMB4 Proteasome subunit beta type-4 yes yes 0 0 1 By MS/MS 10 0 1 1 53.028 53.686 3 0.0029179 60023 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.629 32.085 7919700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7919700 50312 1229 45153 421860 332807 332807 1 SYNYVVTAQK Acetyl (Protein N-term) 1213.5979 0.59790293 2608 Q16531 DDB1 DNA damage-binding protein 1 yes yes 1 0 0 By MS/MS By MS/MS 5.5 4.5 1 1 1 1 80.217 83.149 2 0.0023206 65811 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.076 48.918 18636000 2247000 0 0 0 0 0 0 0 0 0 0 0 0 0 16390000 50313 2608 45154 421861;421862 332808;332809 332808 2 SYPGLLIVPQSVQDNALQR Unmodified 2097.1219 0.12185306 634 O95248 SBF1 Myotubularin-related protein 5 yes yes 0 0 0 By MS/MS 10 0 1 1 87.397 87.555 3 0.0039115 101294 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 24.3 21.376 2585200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2585200 50314 634 45155 421863 332810 332810 1 SYPGSQLDILIDQGK Unmodified 1632.8359 0.83590137 929 P10768 ESD S-formylglutathione hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 1 3 2 85.302 82.225 2 0.00049368 100401 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 87.618 68.375 425150000 10726000 408670000 5753900 0 0 0 0 0 0 0 0 0 0 0 0 50315 929 45156 421864;421865;421866;421867;421868;421869 332811;332812;332813;332814 332814 4 SYPGSQLDILIDQGKDDQFLLDGQLLPDNFIAACTEK Unmodified 4137.0252 0.025241643 929 P10768 ESD S-formylglutathione hydrolase yes yes 0 0 1 By MS/MS 2 0 1 1 100.09 91.956 3 0.023861 118502 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 18.31 14.64 7866600 7866600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50316 929 45157 421870 332815 332815 1 SYPMFPAPEER Unmodified 1322.5965 0.59652272 4818 Q9P2I0 CPSF2 Cleavage and polyadenylation specificity factor subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 67.904 68.139 2 0.023925 78270 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 41.283 32.371 26215000 0 0 0 0 0 0 0 2877900 2293200 3604600 4324300 0 3746400 0 9368800 50317 4818 45158 421871;421872;421873;421874;421875;421876 332816;332817 332816 2 SYPMFPAPEERIK Unmodified 1563.7755 0.77554972 4818 Q9P2I0 CPSF2 Cleavage and polyadenylation specificity factor subunit 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 75.336 69.729 3 0.018221 85920 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 48.625 41.586 39011000 33766000 0 5245000 0 0 0 0 0 0 0 0 0 0 0 0 50318 4818 45159 421877;421878 332818;332819 332819 2 SYPMFPAPEERIK Oxidation (M) 1579.7705 0.77046434 4818 Q9P2I0 CPSF2 Cleavage and polyadenylation specificity factor subunit 2 yes yes 0 1 1 By MS/MS 2 0 1 1 71.932 63.694 3 0.027698 84846 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.563 39.775 22521000 22521000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50319 4818 45159 421879 332820 332820 0 SYPSLTTK Unmodified 895.4651 0.46509784 2481 Q15029 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS 7 3.87 3 5 1 1 1 1 1 1 1 1 34.995 33.309 2 0.028474 35732 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.721 23.792 414250000 15272000 289220000 5966500 0 0 0 14740000 13577000 13622000 0 0 0 0 24780000 37067000 50320 2481 45160 421880;421881;421882;421883;421884;421885;421886;421887 332821;332822 332821 2 SYPYLFKGLEDLHLDER Unmodified 2094.0422 0.042205751 3953 Q96Q15 SMG1 Serine/threonine-protein kinase SMG1 yes yes 0 0 1 By MS/MS 10 0 1 1 83.922 84.112 3 0.015088 97096 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 21.534 12.128 7193800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7193800 50321 3953 45161 421888 332823 332823 1 SYQALALWK Unmodified 1078.5811 0.58113065 533 O75694 NUP155 Nuclear pore complex protein Nup155 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching 10 0 5 1 1 1 1 1 77.229 77.235 2 0.0064261 88336 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 75.109 58.554 56340000 0 0 0 6713900 0 10489000 0 0 0 10384000 0 0 0 9792100 18961000 50322 533 45162 421889;421890;421891;421892;421893 332824 332824 1 SYQDAVLEDIFK Unmodified 1426.698 0.6980109 5269 Q9Y680 FKBP7 Peptidyl-prolyl cis-trans isomerase FKBP7 yes yes 0 0 0 By MS/MS 2 0 1 1 95.234 90.369 2 9.0686E-05 112051 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.18 86.967 17447000 0 17447000 0 0 0 0 0 0 0 0 0 0 0 0 0 50323 5269 45163 421894 332825 332825 1 SYQDPSNAQFLESIR Unmodified 1753.8271 0.8271276 5046 Q9UNZ2 NSFL1C NSFL1 cofactor p47 yes yes 0 0 0 By MS/MS 10 0 1 1 76.406 76.534 2 8.8314E-13 87485 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 105.17 91.265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50324 5046 45164 421895 332826 332826 1 SYQEELDK Unmodified 1010.4557 0.45565537 2768 Q5T1M5 FKBP15 FK506-binding protein 15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 24.29 23.723 2 0.022985 24608 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.709 21.162 237650000 7208100 59701000 0 0 0 12365000 12333000 11464000 9632000 17067000 16576000 22552000 17721000 18784000 32250000 50325 2768 45165 421896;421897;421898;421899;421900;421901;421902;421903;421904;421905;421906;421907 332827;332828;332829 332829 3 SYQEGLAR Unmodified 922.45084 0.45084476 5132 Q9Y312 AAR2 Protein AAR2 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 21.028 21.238 2 0.0082464 20803 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 86.866 71.224 89091000 0 0 0 4279000 3163500 9898700 5263600 0 5000600 8730500 9928700 11101000 9392900 9463900 12869000 50326 5132 45166 421908;421909;421910;421911;421912;421913;421914;421915;421916;421917;421918 332830;332831;332832;332833;332834;332835;332836;332837;332838;332839 332835 10 SYQEGLARLPEMK Unmodified 1520.7657 0.76571331 5132 Q9Y312 AAR2 Protein AAR2 homolog yes yes 0 0 1 By MS/MS 2 0 1 1 71.769 66.042 3 0.0034071 83783 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 53.448 44.849 46225000 0 46225000 0 0 0 0 0 0 0 0 0 0 0 0 0 50327 5132 45167 421919 332840 332840 1 SYQEGLARLPEMK Oxidation (M) 1536.7606 0.76062794 5132 Q9Y312 AAR2 Protein AAR2 homolog yes yes 0 1 1 By MS/MS 2 0 1 1 53.174 49.261 3 0.042092 61818 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 46.159 36.622 15712000 0 0 15712000 0 0 0 0 0 0 0 0 0 0 0 0 50328 5132 45167 421920 332841 332841 0 SYQFGIIGNDR Unmodified 1268.6149 0.61494998 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.58 68.66 2 0.00026483 79100 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 107.15 95.664 234450000 0 0 0 12179000 12262000 15086000 17260000 14634000 14911000 24888000 25257000 33281000 20472000 17601000 26623000 50329 4285 45168 421921;421922;421923;421924;421925;421926;421927;421928;421929;421930;421931;421932 332842;332843;332844;332845;332846;332847;332848;332849;332850;332851;332852;332853;332854 332851 13 SYQSELEALRR Unmodified 1350.6892 0.68917755 399 O60437 PPL Periplakin yes yes 0 0 1 By MS/MS By matching 10 0 2 1 1 57.844 57.812 3 0.0093872 66423 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 32.008 24.969 11628000 0 0 0 5389400 0 0 0 0 0 0 0 0 0 0 6239100 50330 399 45169 421933;421934 332855 332855 1 SYQSFQTFR Unmodified 1162.5407 0.5407224 2189 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 51.53 51.628 2 0.0032531 57206 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.657 68.664 171170000 0 0 0 16113000 11349000 16489000 13097000 8996900 9794300 16936000 16941000 0 21621000 15216000 24621000 50331 2189 45170 421935;421936;421937;421938;421939;421940;421941;421942;421943;421944;421945 332856;332857;332858;332859;332860;332861;332862;332863;332864;332865 332860 10 SYRDQTIVDPFSSK Unmodified 1641.7999 0.79985021 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.429 63.522 3 0.00099337 72571 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 58.079 45.287 172240000 0 0 0 6644400 6260600 16037000 9615100 12214000 6104200 15684000 14723000 20921000 13306000 18391000 32344000 50332 5071 45171 421946;421947;421948;421949;421950;421951;421952;421953;421954;421955;421956;421957 332866;332867;332868;332869;332870;332871;332872 332866 7 SYRGDREAFEETHLTSLDPVK Unmodified 2449.1874 0.18736644 4681 Q9NVS9 PNPO Pyridoxine-5'-phosphate oxidase yes yes 0 0 2 By MS/MS 2 0 1 1 75.721 67.591 4 0.0077819 89183 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 30.587 27.785 12281000 12281000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50333 4681 45172 421958 332873 332873 1 SYRHGDLPDIQIK Unmodified 1540.7998 0.79979063 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 1 By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 2 33.874 34.228 3;4 0.00074582 60750 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.897 43.286 47271000 0 0 0 0 0 3879700 0 6247200 2593600 7697600 0 7424800 0 1524400 17904000 50334 1986 45173 421959;421960;421961;421962;421963;421964;421965;421966 332874;332875 332875 2 SYSCQVTHEGSTVEK Unmodified 1710.7519 0.75191374 911;43 P0DOY3;P0DOY2;P0CF74;B9A064;P0CG04 IGLC6;IGLL5;IGLC1 Ig lambda-6 chain C region;Immunoglobulin lambda-like polypeptide 5;Ig lambda-1 chain C regions no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 2 1 1 1 1 1 1 2 1 1 1 1 23.136 23.334 2;3 1.0091E-22 24802 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 118.48 110.84 146380000 0 0 0 62629000 7385700 8478700 5145800 5760800 2546600 5930600 11320000 13425000 6221300 5813000 11723000 50335 911;43 45174 421967;421968;421969;421970;421971;421972;421973;421974;421975;421976;421977;421978;421979;421980 332876;332877;332878;332879;332880;332881;332882;332883;332884 332883 9 SYSDPPLK Unmodified 905.44945 0.44944778 1692 P52597 HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 28.849 29.045 2 0.01026 31504 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 80.229 65.447 1410500000 0 0 0 78931000 88864000 90377000 96155000 0 78174000 169870000 146640000 137490000 141620000 135070000 247340000 50336 1692 45175 421981;421982;421983;421984;421985;421986;421987;421988;421989;421990;421991 332885;332886;332887;332888;332889;332890;332891;332892;332893;332894;332895;332896;332897;332898;332899;332900;332901;332902 332885 17 SYSEDDIHR Unmodified 1120.4785 0.47851608 3120;5227;4251 Q7Z739;Q9BYJ9;Q9Y5A9 YTHDF3;YTHDF1;YTHDF2 YTH domain-containing family protein 3;YTH domain-containing family protein 1;YTH domain-containing family protein 2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 17.824 18.012 2 0.0032698 17835 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 93.162 71.031 444340000 0 0 0 18491000 16144000 21094000 31517000 27064000 27419000 46012000 41285000 42182000 39582000 42718000 90830000 50337 3120;4251;5227 45176 421992;421993;421994;421995;421996;421997;421998;421999;422000;422001;422002;422003 332903;332904;332905;332906;332907;332908;332909;332910;332911;332912;332913;332914;332915 332912 13 SYSEDDIHRSIK Unmodified 1448.6896 0.68957148 3120;5227;4251 Q7Z739;Q9BYJ9;Q9Y5A9 YTHDF3;YTHDF1;YTHDF2 YTH domain-containing family protein 3;YTH domain-containing family protein 1;YTH domain-containing family protein 2 no no 0 0 1 By MS/MS By MS/MS By MS/MS 2.33 0.471 2 1 1 1 1 31.283 26.725 3 0.0024578 33527 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 74.611 53.551 144370000 27182000 8849700 108340000 0 0 0 0 0 0 0 0 0 0 0 0 50338 3120;4251;5227 45177 422004;422005;422006 332916;332917;332918;332919 332917 4 SYSFDEIRK Unmodified 1143.556 0.55603812 1481 P43490 NAMPT Nicotinamide phosphoribosyltransferase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 7.5 3.71 5 11 1 2 2 1 1 1 1 1 1 1 1 1 1 1 44.761 43.193 2;3 0.0076682 54530 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 62.463 52.359 632280000 16358000 153350000 211730000 10371000 7303400 0 16354000 14069000 14241000 15490000 35686000 30196000 23550000 29277000 54308000 50339 1481 45178 422007;422008;422009;422010;422011;422012;422013;422014;422015;422016;422017;422018;422019;422020;422021;422022 332920;332921;332922;332923;332924;332925;332926;332927;332928;332929;332930;332931;332932;332933 332929 12 SYSFHQSQHR Unmodified 1275.5745 0.57448215 3433 Q8NEY8 PPHLN1 Periphilin-1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 11.325 11.42 3 0.012354 10431 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 41.283 27.026 22768000 0 0 0 2244400 1216700 2341200 1605800 1466200 1453800 2338300 0 0 3733500 2797600 3570600 50340 3433 45179 422023;422024;422025;422026;422027;422028;422029;422030;422031;422032 332934;332935 332935 2 SYSGENTASAIAR Unmodified 1325.6212 0.62115757 2823 Q5VW36 FOCAD Focadhesin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 31.338 31.576 2 1.4677E-11 34342 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 143.89 111.96 174630000 0 0 0 0 16506000 19944000 13351000 16597000 12537000 19811000 16895000 19567000 12348000 13199000 13876000 50341 2823 45180 422033;422034;422035;422036;422037;422038;422039;422040;422041;422042;422043 332936;332937;332938;332939;332940;332941;332942;332943;332944;332945;332946;332947;332948;332949 332944 13 SYSMIVNNLLK Oxidation (M) 1296.6748 0.67477304 4497 Q9HB71 CACYBP Calcyclin-binding protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 81.863 80.49 2 7.2334E-05 93022 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 110.41 96.271 366860000 117580000 87582000 6872900 0 5055200 33655000 7405500 10201000 9162600 38109000 27433000 0 8349500 15460000 0 50342 4497 45181 422044;422045;422046;422047;422048;422049;422050;422051;422052;422053;422054;422055;422056;422057 332950;332951;332952;332953;332954;332955;332956;332957;332958;332959;332960;332961;332962;332963;332964 332951 5934 15 SYSMIVNNLLK Unmodified 1280.6799 0.67985842 4497 Q9HB71 CACYBP Calcyclin-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.42 3.66 3 1 8 1 2 1 1 1 1 1 1 1 1 1 85.379 83.771 2 0.00036977 96455 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.639 77.859 407190000 163900000 133830000 2808300 0 0 7712700 0 7015800 0 14110000 15075000 7556300 0 7024200 48162000 50343 4497 45181 422058;422059;422060;422061;422062;422063;422064;422065;422066;422067;422068;422069 332965;332966;332967;332968;332969;332970;332971;332972;332973;332974;332975;332976;332977 332970 13 SYSMIVNNLLKPISVEGSSK Oxidation (M) 2181.1351 0.13511986 4497 Q9HB71 CACYBP Calcyclin-binding protein yes yes 0 1 1 By MS/MS 2 0 1 1 93.651 85.521 3 2.3834E-05 110626 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.857 54.199 13314000 13314000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50344 4497 45182 422070 332978 332978 5934 1 SYSMIVNNLLKPISVEGSSK Unmodified 2165.1402 0.14020524 4497 Q9HB71 CACYBP Calcyclin-binding protein yes yes 0 0 1 By MS/MS 2 0 1 1 95.311 87.181 3 6.0265E-10 112768 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.729 85.075 12245000 12245000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50345 4497 45182 422071 332979 332979 1 SYSNITVNEDQIK Unmodified 1509.7311 0.73110195 4077 Q99996 AKAP9 A-kinase anchor protein 9 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 52.026 52.043 2 0.0068683 58459 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 46.606 27.363 41621000 0 0 0 2443800 2325600 0 5392000 4073700 0 5783400 7821200 0 6124200 7657000 0 50346 4077 45183 422072;422073;422074;422075;422076;422077;422078;422079;422080 332980;332981;332982;332983;332984 332981 5 SYSPSDLVELVAR Unmodified 1434.7355 0.73545904 4477 Q9H9T3 ELP3 Elongator complex protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 88.8 88.933 2 0.00060699 103158 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 76.143 65.313 16764000 0 0 0 0 0 1833400 780580 1171500 0 2114200 1976600 1939600 1117200 1517500 4313100 50347 4477 45184 422081;422082;422083;422084;422085;422086;422087;422088;422089 332985;332986;332987;332988;332989;332990;332991;332992;332993 332986 9 SYSPYDMLESIRK Oxidation (M) 1603.7552 0.75520821 840 P07355;A6NMY6 ANXA2;ANXA2P2 Annexin A2;Putative annexin A2-like protein yes no 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 9.26 2.15 2 17 1 1 1 2 1 1 2 2 2 1 1 2 2 63.439 63.096 3 0.00021391 71647 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 68.83 63.45 404260000 888460 8042600 0 0 14489000 41726000 18816000 42688000 24377000 56542000 61738000 27522000 17641000 32631000 57159000 50348 840 45185 422090;422091;422092;422093;422094;422095;422096;422097;422098;422099;422100;422101;422102;422103;422104;422105;422106;422107;422108 332994;332995;332996;332997;332998;332999;333000;333001;333002;333003;333004;333005;333006 333003 1032 10 SYSPYDMLESIRK Unmodified 1587.7603 0.76029359 840 P07355;A6NMY6 ANXA2;ANXA2P2 Annexin A2;Putative annexin A2-like protein yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.24 3.75 5 1 11 2 3 1 1 1 1 1 1 1 1 1 1 1 1 82.049 80.649 2;3 1.4627E-13 101541 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.21 112.61 428690000 153120000 194650000 1880000 1990700 0 2970900 1381800 6019200 2078100 5019600 5547200 6933100 2198300 5082900 39815000 50349 840 45185 422109;422110;422111;422112;422113;422114;422115;422116;422117;422118;422119;422120;422121;422122;422123;422124;422125 333007;333008;333009;333010;333011;333012;333013;333014;333015;333016;333017;333018;333019;333020;333021;333022 333009 16 SYSQSSNLFR Unmodified 1187.5571 0.55710075 1045 P17028 ZNF24 Zinc finger protein 24 yes yes 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 44.174 44.135 2 0.0015625 50071 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 127.46 112.69 35974000 0 0 0 13829000 0 0 0 8166900 0 0 0 0 0 13978000 0 50350 1045 45186 422126;422127;422128 333023 333023 1 SYSSGGEDGYVR Unmodified 1275.5368 0.53675924 2273 Q13347 EIF3I Eukaryotic translation initiation factor 3 subunit I yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 25.52 25.381 2 2.7685E-05 25889 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.342 91.377 221660000 0 21225000 0 0 9630900 11119000 9937000 9061300 9374900 16379000 15968000 32238000 13836000 20798000 52090000 50351 2273 45187 422129;422130;422131;422132;422133;422134;422135;422136;422137;422138;422139;422140 333024;333025;333026;333027;333028;333029;333030;333031;333032;333033;333034;333035;333036;333037;333038 333029 14 SYSSGGEDGYVRIHYFDPQYFEFEFEA Unmodified 3238.3832 0.38322529 2273 Q13347 EIF3I Eukaryotic translation initiation factor 3 subunit I yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 97.678 91.857 3 7.1342E-07 97037 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 47.807 45.723 100530000 100530000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50352 2273 45188 422141;422142 333039;333040;333041 333040 3 SYSSSLMDQIPIK Oxidation (M) 1483.7228 0.72284545 4328 Q9H0H0 INTS2 Integrator complex subunit 2 yes yes 0 1 0 By MS/MS 2 0 1 1 74.65 69.495 2 0.033262 87315 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 44.097 17.208 8895100 0 8895100 0 0 0 0 0 0 0 0 0 0 0 0 0 50353 4328 45189 422143 333042 333042 1 SYSSSLMDQIPIK Unmodified 1467.7279 0.72793082 4328 Q9H0H0 INTS2 Integrator complex subunit 2 yes yes 0 0 0 By MS/MS 2 0 1 1 84.77 80.026 2 6.5837E-23 99465 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 152.54 130.55 98013000 0 98013000 0 0 0 0 0 0 0 0 0 0 0 0 0 50354 4328 45189 422144 333043 333043 1 SYSVGASGSSSR Unmodified 1143.5156 0.51562986 3357 Q8N684 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.561 14.724 2 2.263E-08 14207 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 134.25 116.86 521800000 0 0 0 24948000 28568000 24158000 29130000 22358000 30594000 48085000 70339000 56281000 38056000 51281000 98005000 50355 3357 45190 422145;422146;422147;422148;422149;422150;422151;422152;422153;422154;422155;422156 333044;333045;333046;333047;333048;333049;333050;333051;333052;333053;333054;333055 333054 12 SYSVGASGSSSRK Unmodified 1271.6106 0.61059288 3357 Q8N684 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.08 3.42 6 19 2 2 2 2 1 1 2 2 2 2 1 2 1 1 2 9.8317 9.0986 2;3 1.0626E-05 7922 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 87.298 84.159 357660000 205280000 20372000 18445000 12840000 2514400 2669300 21133000 2234200 16919000 9240000 0 17107000 4300100 4006500 20601000 50356 3357 45191 422157;422158;422159;422160;422161;422162;422163;422164;422165;422166;422167;422168;422169;422170;422171;422172;422173;422174;422175;422176;422177;422178;422179;422180;422181 333056;333057;333058;333059;333060;333061;333062;333063;333064;333065;333066;333067;333068;333069;333070;333071 333058 11 SYTAADATLK Unmodified 1039.5186 0.51858998 3 A0AVT1 UBA6 Ubiquitin-like modifier-activating enzyme 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.8 3.92 2 3 1 1 1 1 1 33.523 31.553 2 0.0037645 40441 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.838 69.767 192640000 5227900 164780000 0 0 0 6893700 0 0 0 0 0 5831200 0 0 9906200 50357 3 45192 422182;422183;422184;422185;422186 333072;333073;333074;333075 333074 4 SYTDYRVGTALPGK Unmodified 1526.7729 0.77290718 2101 Q04446 GBE1 1,4-alpha-glucan-branching enzyme yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 58.603 52.626 3 0.0076371 71058 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.088 45.54 303620000 202980000 78821000 21821000 0 0 0 0 0 0 0 0 0 0 0 0 50358 2101 45193 422187;422188;422189 333076;333077;333078;333079 333078 3 SYTHPSSLRK Unmodified 1174.6095 0.60947067 658 O95409;Q15915;O60481;Q96T25 ZIC2;ZIC1;ZIC3;ZIC5 Zinc finger protein ZIC 2;Zinc finger protein ZIC 1;Zinc finger protein ZIC 3;Zinc finger protein ZIC 5 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 10.72 10.853 3 0.0034464 8674 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.216 53.882 27258000 0 0 0 1461500 1141000 0 2702700 1829500 2505200 2618400 0 4607100 3522100 2559400 4311000 50359 658 45194 422190;422191;422192;422193;422194;422195;422196;422197;422198;422199 333080;333081 333080 2 SYTIAVASLGK Unmodified 1108.6128 0.61282471 818 P06280 GLA Alpha-galactosidase A yes yes 0 0 0 By MS/MS 10 0 1 1 67.789 67.111 2 0.0048809 77733 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 60.398 34.293 2205100 0 0 0 2205100 0 0 0 0 0 0 0 0 0 0 0 50360 818 45195 422200 333082 333082 1 SYTLTTGMDLVVK Oxidation (M) 1442.7327 0.73268185 4204 Q9BW83 IFT27 Intraflagellar transport protein 27 homolog yes yes 0 1 0 By MS/MS By MS/MS 2.67 0.471 1 2 1 2 73.882 69.396 2 0.0062446 83763 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 63.283 56.615 101890000 268370 101620000 0 0 0 0 0 0 0 0 0 0 0 0 0 50361 4204 45196 422201;422202;422203 333083;333084;333085 333084 5679 3 SYTPLHAAASSGMISVVK Unmodified 1817.9346 0.93456956 251 O15084 ANKRD28 Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A yes yes 0 0 0 By MS/MS 2 0 1 1 79.231 71.101 3 0.0011483 93410 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.036 39.248 14906000 14906000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50362 251 45197 422204 333086 333086 1 SYTSDLQK Unmodified 940.45018 0.45017606 3573 Q8WWI1 LMO7 LIM domain only protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 22.238 22.112 2 0.016731 22941 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 66.799 39.679 392240000 0 68399000 0 18998000 20282000 24071000 32407000 16091000 24306000 35234000 31881000 35850000 25583000 24259000 34879000 50363 3573 45198 422205;422206;422207;422208;422209;422210;422211;422212;422213;422214;422215;422216;422217 333087;333088;333089;333090;333091;333092;333093;333094;333095;333096;333097;333098 333088 10 SYTSGPGSR Unmodified 910.41446 0.41445926 67 CON__P05787;P05787 KRT8 Keratin, type II cytoskeletal 8 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 8.5704 8.6992 2 2.3377E-05 7344 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 147.52 80.525 + 821060000 0 0 0 63345000 89535000 58655000 64404000 44913000 45732000 57770000 114400000 105660000 63702000 50728000 62212000 50364 67 45199 422218;422219;422220;422221;422222;422223;422224;422225;422226;422227;422228;422229 333099;333100;333101;333102;333103;333104;333105;333106;333107;333108;333109 333101 5 SYVAWDREK Unmodified 1152.5564 0.55637247 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.46 3.15 5 21 2 1 2 1 1 2 2 2 2 1 2 2 2 2 2 35.597 34.813 2;3 3.2356E-05 44750 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 157.34 130.38 1814500000 1066300000 23167000 58093000 21141000 14191000 59192000 31936000 47378000 40081000 27088000 117900000 76968000 64030000 58771000 108220000 50365 1986 45200 422230;422231;422232;422233;422234;422235;422236;422237;422238;422239;422240;422241;422242;422243;422244;422245;422246;422247;422248;422249;422250;422251;422252;422253;422254;422255 333110;333111;333112;333113;333114;333115;333116;333117;333118;333119;333120;333121;333122;333123;333124 333118 6 SYVDLLK Unmodified 836.46437 0.46436956 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 18 1 1 1 2 2 2 2 2 2 1 1 1 64.71 64.847 1;2 0.030787 74686 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 74.415 45.077 4363900000 0 0 0 7695100 10074000 15450000 246800000 359310000 248640000 762540000 1041400000 1635200000 6979200 8759900 21005000 50366 4226 45201 422256;422257;422258;422259;422260;422261;422262;422263;422264;422265;422266;422267;422268;422269;422270;422271;422272;422273 333125;333126;333127;333128;333129;333130 333129 5 SYVDPSTDER Unmodified 1167.5044 0.50439648 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.784 24.987 2 0.0027225 26591 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 80.755 52.537 63129000 0 0 0 6391500 4778100 5457400 5205200 5694100 3258500 5135400 5574300 5678400 7647500 3279200 5029800 50367 2501 45202 422274;422275;422276;422277;422278;422279;422280;422281;422282;422283;422284;422285 333131;333132;333133;333134;333135;333136 333136 6 SYVDRHMESLSQSK Unmodified 1665.7781 0.77806891 3835 Q96F86 EDC3 Enhancer of mRNA-decapping protein 3 yes yes 0 0 1 By MS/MS 2 0 2 2 40.361 33.738 3;4 0.0019146 46663 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.759 50.474 72071000 72071000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50368 3835 45203 422286;422287 333137;333138;333139 333138 3 SYVEAQEDYLRR Unmodified 1527.7318 0.73177065 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.533 47.696 3 3.8474E-05 53253 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 87.363 78.169 214100000 0 0 0 10674000 7711200 19264000 13491000 15914000 13434000 22273000 19796000 27534000 22171000 15414000 26425000 50369 5262 45204 422288;422289;422290;422291;422292;422293;422294;422295;422296;422297;422298;422299 333140;333141;333142;333143;333144;333145;333146;333147;333148;333149;333150;333151 333149 12 SYVHSALK Unmodified 903.48142 0.48141661 1420 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 yes yes 0 0 0 By MS/MS By matching By MS/MS 2 0 3 1 1 1 22.31 18.423 2 0.01662 26736 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 132.08 87.003 243350000 180890000 28305000 34159000 0 0 0 0 0 0 0 0 0 0 0 0 50370 1420 45205 422300;422301;422302 333152;333153 333152 1 SYVITGSWNPK Unmodified 1250.6295 0.62953741 5171 Q9Y3P9 RABGAP1 Rab GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.12 2.32 1 7 1 1 1 1 1 1 1 1 65.598 65.071 2 0.0013675 73869 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.233 34.085 19309000 0 1148700 0 0 0 3471700 0 2902700 0 0 3629700 4126400 0 0 4030100 50371 5171 45206 422303;422304;422305;422306;422307;422308;422309;422310 333154;333155;333156;333157;333158;333159;333160 333156 7 SYVNYVLSEK Unmodified 1200.6027 0.60265396 1737 P54274 TERF1 Telomeric repeat-binding factor 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 72.725 65.763 2 0.014936 83997 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.677 63.681 33642000 11602000 22040000 0 0 0 0 0 0 0 0 0 0 0 0 0 50372 1737 45207 422311;422312 333161;333162 333161 2 SYVTTSTR Unmodified 913.45051 0.45051041 870 P08670 VIM Vimentin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 15.028 15.199 1;2 0.0045343 14514 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 110.31 86.453 5917800000 0 0 0 289920000 397900000 316760000 577730000 332220000 278810000 501050000 781430000 894190000 344550000 537240000 665950000 50373 870 45208 422313;422314;422315;422316;422317;422318;422319;422320;422321;422322;422323;422324;422325;422326;422327;422328;422329;422330;422331;422332;422333;422334;422335;422336 333163;333164;333165;333166;333167;333168;333169;333170;333171;333172;333173;333174;333175;333176;333177;333178;333179 333165 13 SYYEANDVTSAINIIDEAFSK Unmodified 2349.1012 0.10123677 5245 Q9Y5Q9 GTF3C3 General transcription factor 3C polypeptide 3 yes yes 0 0 0 By MS/MS 2 0 2 2 101.15 96.441 2;3 9.7091E-72 119202 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 184.48 175.28 40255000 0 40255000 0 0 0 0 0 0 0 0 0 0 0 0 0 50374 5245 45209 422337;422338 333180;333181 333180 2 SYYETSK Unmodified 876.38651 0.38651317 5031 Q9UNF1 MAGED2 Melanoma-associated antigen D2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 11.778 11.927 2 0.031655 10746 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 73.616 56.346 139320000 0 0 0 6574100 8401700 10837000 11616000 12359000 9957400 15844000 8689900 11789000 13703000 9125700 20420000 50375 5031 45210 422339;422340;422341;422342;422343;422344;422345;422346;422347;422348;422349;422350 333182;333183 333182 2 SYYFPVK Unmodified 902.4538 0.45380487 2528 Q15393 SF3B3 Splicing factor 3B subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.199 59.31 2 0.048847 66365 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.803 36.697 766500000 0 0 0 32020000 39368000 46697000 52427000 51438000 42520000 57039000 86210000 84134000 71678000 88092000 114880000 50376 2528 45211 422351;422352;422353;422354;422355;422356;422357;422358;422359;422360;422361;422362 333184 333184 1 SYYKPDSPEYK Unmodified 1375.6296 0.62959699 3143 Q86U86 PBRM1 Protein polybromo-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 28.894 29.17 3 0.0054788 30474 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 40.154 26.72 153970000 0 0 0 0 7636000 0 8111000 9236200 0 14432000 25791000 15717000 25736000 23951000 23362000 50377 3143 45212 422363;422364;422365;422366;422367;422368;422369;422370;422371 333185;333186;333187;333188;333189;333190;333191;333192 333190 8 SYYNVVLQNILETENEYSK Unmodified 2305.1114 0.11140753 2379 Q14155 ARHGEF7 Rho guanine nucleotide exchange factor 7 yes yes 0 0 0 By MS/MS 2 0 1 1 98.639 90.509 3 3.0334E-08 116756 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.269 88.869 12583000 12583000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50378 2379 45213 422372 333193 333193 1 SYYQSSVQYLYR Unmodified 1555.7307 0.73070802 3204 Q86Y56 DNAAF5 Dynein assembly factor 5, axonemal yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 68.328 68.396 2 9.3327E-07 77767 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 116.3 102.37 64244000 0 0 0 2273700 2527800 0 4885200 5234700 5754300 7339700 0 15033000 4046700 6115200 11034000 50379 3204 45214 422373;422374;422375;422376;422377;422378;422379;422380;422381;422382;422383 333194;333195;333196;333197;333198;333199;333200;333201;333202 333197 9 TAAAAADVNGFK Unmodified 1134.5669 0.56693715 2063 Q01804 OTUD4 OTU domain-containing protein 4 yes yes 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 37.028 37.189 2 0.0044403 41455 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 57.55 32.774 7641200 0 0 0 0 0 2556700 0 0 2515600 0 0 0 2569000 0 0 50380 2063 45215 422384;422385;422386 333203 333203 1 TAAAAAEHSQR Unmodified 1111.537 0.53703401 308 O43242 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 5.4952 5.5563 2 0.00028854 3040 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 103.7 87.497 24826000 0 0 0 66644 4655000 7265000 2518400 0 88465 5057000 2117800 3058200 0 0 0 50381 308 45216 422387;422388;422389;422390;422391;422392;422393;422394 333204;333205;333206;333207;333208 333208 3 TAAAAAEHSQRELDTVTLEDIK Unmodified 2368.187 0.18703209 308 O43242 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.21 4.01 1 7 1 10 3 3 3 1 1 1 1 1 1 1 1 1 1 69.424 67.523 3;4 2.111E-101 72096 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 167.63 147.18 1100100000 261670000 232040000 333850000 0 8529100 28513000 0 9238100 10936000 57380000 46135000 60710000 6814800 8168400 36076000 50382 308 45217 422395;422396;422397;422398;422399;422400;422401;422402;422403;422404;422405;422406;422407;422408;422409;422410;422411;422412;422413 333209;333210;333211;333212;333213;333214;333215;333216;333217;333218;333219;333220;333221;333222;333223;333224;333225;333226;333227;333228 333214 19 TAAALAPASLTSAR Unmodified 1299.7147 0.71466402 5066 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 57.149 57.269 2 1.1544E-42 65101 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 155 97.413 529090000 0 0 0 31504000 34483000 26985000 42086000 36006000 31108000 39126000 63137000 75266000 35631000 45329000 68434000 50383 5066 45218 422414;422415;422416;422417;422418;422419;422420;422421;422422;422423;422424;422425 333229;333230;333231;333232;333233;333234;333235;333236;333237;333238;333239 333234 6 TAAANAAAGAAENAFR Unmodified 1475.7117 0.71170391 220 O14828 SCAMP3 Secretory carrier-associated membrane protein 3 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS 10 0 4 1 1 1 1 55.328 55.478 2 0.0044153 63452 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 43.337 12.264 14663000 0 0 0 0 2652500 0 1432500 0 0 0 5058400 5519900 0 0 0 50384 220 45219 422426;422427;422428;422429 333240;333241 333241 2 TAAANAAAGAAENAFRAP Unmodified 1643.8016 0.80158155 220 O14828 SCAMP3 Secretory carrier-associated membrane protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 66.821 66.904 2;3 6.028E-25 76557 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 132.47 115.04 169170000 0 0 0 8892800 12557000 14454000 11291000 17115000 11241000 13334000 17837000 21743000 11755000 11812000 17133000 50385 220 45220 422430;422431;422432;422433;422434;422435;422436;422437;422438;422439;422440;422441;422442;422443;422444;422445;422446;422447;422448;422449;422450;422451;422452;422453 333242;333243;333244;333245;333246;333247;333248;333249;333250 333249 8 TAAATATVLK Acetyl (Protein N-term) 987.56006 0.56006086 5233 Q9Y5J5 PHLDA3 Pleckstrin homology-like domain family A member 3 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 58.455 58.737 1;2 0.011494 65761 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 41.427 9.8968 70958000 0 0 0 0 0 0 6430500 5304500 6754000 9632400 11706000 2712900 8948600 6739500 12730000 50386 5233 45221 422454;422455;422456;422457;422458;422459;422460;422461;422462 333251;333252;333253 333252 2 TAADHVEEK Unmodified 998.46689 0.46688876 2510 Q15276 RABEP1 Rab GTPase-binding effector protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 6.3419 3.041 2 0.0046487 5140 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.74 68.358 16786000 0 16786000 0 0 0 0 0 0 0 0 0 0 0 0 0 50387 2510 45222 422463;422464 333254;333255 333254 2 TAADVVSPGANSVDSR Unmodified 1544.7431 0.74306362 2063 Q01804 OTUD4 OTU domain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.347 37.527 2 1.5946E-27 41451 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 132.32 115.95 151540000 0 0 0 8581800 10503000 12848000 9342100 10420000 11474000 14863000 15592000 18738000 13941000 11144000 14097000 50388 2063 45223 422465;422466;422467;422468;422469;422470;422471;422472;422473;422474;422475;422476 333256;333257;333258;333259;333260;333261;333262;333263;333264;333265;333266 333258 11 TAAEAEEILENTNGDDLIEDDEMEGISHK Unmodified 3187.3987 0.39867694 3100 Q7Z4Q2 HEATR3 HEAT repeat-containing protein 3 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 86.55 81.268 3 1.7092E-56 103503 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 114.91 112.83 13715000 10545000 0 3169500 0 0 0 0 0 0 0 0 0 0 0 0 50389 3100 45224 422477;422478 333267;333268 333267 2 TAAEDAIR Unmodified 845.4243 0.42429566 4209 Q9BWF3;Q9BQ04 RBM4;RBM4B RNA-binding protein 4;RNA-binding protein 4B yes no 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 15.65 15.723 2 0.033687 15701 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 97.798 46.832 32786000 0 0 0 0 3548700 0 0 18045000 0 0 0 0 0 11192000 0 50390 4209 45225 422479;422480;422481 333269 333269 0 TAAELLQSQGSQAGGSQTLK Unmodified 1974.0018 0.0017974991 2373 Q14141 SEPT6 Septin-6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 6.25 3.77 1 1 2 2 1 1 56.325 52.902 2 4.0829E-165 67563 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 283.45 283.45 188200000 0 160930000 0 0 0 0 0 0 0 0 27270000 0 0 0 0 50391 2373 45226 422482;422483;422484;422485 333270;333271;333272;333273 333270 4 TAAENDFVTLK Unmodified 1207.6085 0.60846762 79 CON__P35908v2;P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.637 55.767 2 1.6555E-05 64984 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 155.42 155.42 + 7841000000 0 0 0 914680000 496230000 658880000 331820000 943620000 544980000 559970000 682140000 1479400000 694580000 345310000 189440000 50392 79 45227 422486;422487;422488;422489;422490;422491;422492;422493;422494;422495;422496;422497 333274;333275;333276;333277;333278;333279;333280;333281;333282;333283;333284;333285;333286;333287;333288;333289;333290;333291;333292;333293;333294;333295 333292 21 TAAENDFVTLKK Unmodified 1335.7034 0.70343063 79 CON__P35908v2;P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 25 2 2 2 2 3 2 2 2 2 2 2 2 43.276 43.451 2;3 3.2896E-23 47689 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 152.27 130.74 + 17234000000 0 0 0 2626700000 1226800000 469810000 871690000 2454200000 664930000 901160000 1717300000 3710500000 1692700000 587540000 310560000 50393 79 45228 422498;422499;422500;422501;422502;422503;422504;422505;422506;422507;422508;422509;422510;422511;422512;422513;422514;422515;422516;422517;422518;422519;422520;422521;422522 333296;333297;333298;333299;333300;333301;333302;333303;333304;333305;333306;333307;333308;333309;333310;333311;333312;333313;333314;333315;333316;333317;333318;333319;333320;333321 333316 24 TAAENDFVVLK Unmodified 1205.6292 0.62920306 77 CON__P19013;P19013 KRT4 Keratin, type II cytoskeletal 4 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 64.458 64.404 2 0.0013183 73450 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 73.573 45.69 + 72838000 0 0 0 6202800 0 0 33094000 26757000 0 0 0 0 6783200 0 0 50394 77 45229 422523;422524;422525;422526 333322;333323;333324;333325 333322 4 TAAENDFVVLKK Unmodified 1333.7242 0.72416608 77 CON__P19013;P19013 KRT4 Keratin, type II cytoskeletal 4 no no 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 4 2 1 1 50.255 50.433 2;3 2.0236E-06 57021 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 123.86 67.602 + 192820000 0 0 0 0 0 0 70589000 40388000 0 0 0 0 81845000 0 0 50395 77 45230 422527;422528;422529;422530 333326;333327;333328;333329;333330;333331;333332 333326 6 TAAENEFVGLKK Unmodified 1305.6929 0.69286595 2056;83 CON__Q01546;Q01546 KRT76 Keratin, type II cytoskeletal 2 oral no no 0 0 1 By MS/MS 10 0 1 1 41.92 41.404 3 0.038392 46772 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 17.117 1.2522 + 8985100 0 0 0 8985100 0 0 0 0 0 0 0 0 0 0 0 50396 83;2056 45231 422531 333333 333333 1 TAAENEFVLLK Unmodified 1233.6605 0.66050319 107;91;109 CON__Q9R0H5;CON__Q3SY84;Q3SY84;CON__Q9DCV7 KRT71 Keratin, type II cytoskeletal 71 no no 0 0 0 By MS/MS 10 0 1 1 74.666 74.761 2 0.0053741 86451 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 63.076 37.986 + 14688000 0 0 0 0 0 0 0 0 0 0 0 0 14688000 0 0 50397 109;91;107 45232 422532 333334 333334 1 TAAENEFVTLK Unmodified 1221.6241 0.62411768 66;58;779;80;960 P04259;CON__P50446;P12035;CON__P12035;CON__P02538;P02538;CON__P04259 KRT6B;KRT3;KRT6A Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 3;Keratin, type II cytoskeletal 6A no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 57.34 57.46 2 2.5726E-08 66431 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 134.68 118.47 + 1022800000 0 0 0 125390000 42527000 58886000 101500000 109010000 24525000 39097000 38638000 52139000 377130000 36141000 17816000 50398 779;80;960;58;66 45233 422533;422534;422535;422536;422537;422538;422539;422540;422541;422542;422543;422544 333335;333336;333337;333338;333339;333340;333341;333342;333343;333344;333345;333346;333347;333348;333349 333348 13 TAAENEFVTLKK Unmodified 1349.7191 0.7190807 66;58;779;80;960 P04259;CON__P50446;P12035;CON__P12035;CON__P02538;P02538;CON__P04259 KRT6B;KRT3;KRT6A Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 3;Keratin, type II cytoskeletal 6A no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 1 2 2 1 1 2 2 3 2 1 44.864 45.024 2;3 1.1779E-23 49815 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 180.66 154.55 + 1674600000 0 0 0 167100000 50485000 11886000 255280000 170310000 7909000 33151000 83703000 193240000 614800000 63287000 23484000 50399 779;80;960;58;66 45234 422545;422546;422547;422548;422549;422550;422551;422552;422553;422554;422555;422556;422557;422558;422559;422560;422561;422562;422563;422564;422565 333350;333351;333352;333353;333354;333355;333356;333357;333358;333359;333360;333361;333362;333363;333364;333365;333366 333361 10 TAAENEFVVLK Unmodified 1219.6449 0.64485312 69;88 CON__P08729;CON__Q3KNV1;P08729 KRT7 Keratin, type II cytoskeletal 7 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.965 66.051 2 1.6816E-08 76750 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 156.92 9.4092 + 851380000 0 0 0 55853000 59455000 66005000 64246000 61090000 58277000 72142000 85107000 100120000 76751000 62929000 89406000 50400 69;88 45235 422566;422567;422568;422569;422570;422571;422572;422573;422574;422575;422576;422577 333367;333368;333369;333370;333371;333372;333373;333374;333375;333376 333375 8 TAAENEFVVLKK Unmodified 1347.7398 0.73981614 69;88 CON__P08729;CON__Q3KNV1;P08729 KRT7 Keratin, type II cytoskeletal 7 no no 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 2 1 2 2 1 1 1 1 1 1 1 51.496 51.595 3 0.00015837 59479 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 78.903 0 + 243770000 0 0 0 11368000 27679000 11843000 31924000 26941000 7329600 15796000 16513000 41829000 18566000 12999000 20980000 50401 69;88 45236 422578;422579;422580;422581;422582;422583;422584;422585;422586;422587;422588;422589;422590;422591;422592 333377;333378;333379;333380;333381;333382;333383;333384 333384 7 TAAENVCYTLINVPMDSEPPSEISLK Acetyl (Protein N-term);Oxidation (M) 2935.3831 0.38309064 1720 P53618 COPB1 Coatomer subunit beta yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.75 4.26 2 2 4 2 2 1 1 1 1 96.007 95.22 3 1.1407E-31 96799 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 105.35 102.79 128700000 28778000 68334000 0 0 0 0 0 0 0 14216000 6888000 4347000 0 0 6139400 50402 1720 45237 422593;422594;422595;422596;422597;422598;422599;422600 333385;333386;333387;333388;333389;333390;333391;333392;333393 333392 2794 9 TAAENVCYTLINVPMDSEPPSEISLK Acetyl (Protein N-term) 2919.3882 0.38817601 1720 P53618 COPB1 Coatomer subunit beta yes yes 1 0 0 By MS/MS 1 0 1 1 105.24 106.13 3 5.43E-38 97881 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 108.17 102.89 50955000 0 50955000 0 0 0 0 0 0 0 0 0 0 0 0 0 50403 1720 45237 422601 333394 333394 1 TAAFVLAMLSR Oxidation (M) 1194.6431 0.64307898 4655 Q9NUU7;Q9UHL0 DDX19A;DDX25 ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX25 yes no 0 1 0 By MS/MS 10 0 1 1 80.159 80.166 2 0.0059131 92728 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 71.349 48.278 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50404 4655 45238 422602 333395 333395 6074 1 TAAFVLPILQK Unmodified 1199.7278 0.72779489 5294 Q9Y6V7 DDX49 Probable ATP-dependent RNA helicase DDX49 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 90.108 89.703 2 0.00046648 112897 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.72 101.72 22174000 0 6774000 0 0 0 2439200 833170 1501300 1313300 2461400 1583100 0 0 1418200 3850300 50405 5294 45239 422603;422604;422605;422606;422607;422608;422609;422610;422611 333396;333397;333398;333399;333400;333401;333402;333403 333398 7 TAALVLHGR Unmodified 936.5505 0.55049923 4616 Q9NRY5 FAM114A2 Protein FAM114A2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 28.043 28.353 2 0.017052 29571 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 56.014 38.029 25886000 0 0 0 0 0 2563400 2763800 0 0 0 4288200 0 6444800 4594900 5230700 50406 4616 45240 422612;422613;422614;422615;422616;422617;422618 333404;333405;333406;333407;333408;333409 333409 6 TAANLVVETGQDGVQIR Unmodified 1769.9272 0.92717599 2773 Q5T3I0 GPATCH4 G patch domain-containing protein 4 yes yes 0 0 0 By matching By MS/MS By matching 10 0 3 1 1 1 71.875 71.821 2 0.0044463 82656 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 59.116 49.429 7617000 0 0 0 0 1343400 0 0 0 0 2980800 0 0 0 3292800 0 50407 2773 45241 422619;422620;422621 333410 333410 1 TAAPSPSLLYK Unmodified 1146.6285 0.62847478 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 58.922 59.042 2 0.0012324 67137 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 74.165 58.503 332970000 0 0 0 24624000 21629000 0 29364000 28331000 24694000 36952000 36582000 38811000 29461000 28560000 33964000 50408 4139 45242 422622;422623;422624;422625;422626;422627;422628;422629;422630;422631;422632 333411;333412;333413;333414;333415;333416;333417;333418 333414 8 TAAPTTASAAPQGPLR Unmodified 1508.7947 0.79470526 3915 Q96L91 EP400 E1A-binding protein p400 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.713 42.889 2 1.7652E-07 47458 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 109.24 93.345 169750000 0 0 0 11357000 8084000 11556000 11926000 9505800 9057400 12691000 19020000 23348000 14944000 17717000 20540000 50409 3915 45243 422633;422634;422635;422636;422637;422638;422639;422640;422641;422642;422643;422644 333419;333420;333421;333422;333423;333424;333425;333426;333427;333428;333429;333430;333431 333429 13 TAAPVNALVSHLLVVEPEK Unmodified 1986.115 0.11497676 950 P11474 ESRRA Steroid hormone receptor ERR1 yes yes 0 0 0 By MS/MS 2 0 1 1 97.263 89.133 3 1.0162E-13 115128 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.03 100.12 14090000 14090000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50410 950 45244 422645 333432 333432 1 TAASAPANVSK Unmodified 1015.5298 0.52982336 3791 Q96D71 REPS1 RalBP1-associated Eps domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 12.74 12.874 2 0.0084329 12066 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.528 25.791 23064000 0 0 0 0 1877600 2990300 2017900 2226100 1728500 3811700 2443400 0 3417700 2550600 0 50411 3791 45245 422646;422647;422648;422649;422650;422651;422652;422653;422654 333433;333434;333435;333436 333433 4 TAASGIPYHSEVPVSLK Unmodified 1754.9203 0.9202997 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.14 3.33 4 1 16 2 2 1 1 1 1 2 1 1 2 2 1 1 1 2 68.692 67.398 2;3 8.1696E-14 76863 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 72.819 59.651 3274500000 889330000 1787300000 269610000 11289000 10110000 30597000 20527000 17531000 14130000 30358000 39687000 33937000 20235000 27956000 71984000 50412 2047 45246 422655;422656;422657;422658;422659;422660;422661;422662;422663;422664;422665;422666;422667;422668;422669;422670;422671;422672;422673;422674;422675 333437;333438;333439;333440;333441;333442;333443;333444;333445;333446;333447;333448;333449;333450;333451;333452;333453;333454 333454 17 TAASGVEANSRPLDHAQPPSSLVIDK Unmodified 2659.3566 0.35655703 119 O00151 PDLIM1 PDZ and LIM domain protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.29 6 1 24 2 2 3 2 2 2 2 2 2 2 2 2 2 2 2 63.858 62.699 3;4 1.7928E-92 84349 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 144.76 128.14 1850200000 268630000 110130000 837320000 15823000 17028000 33107000 29488000 30628000 16487000 31137000 87893000 97075000 31620000 72980000 170850000 50413 119 45247 422676;422677;422678;422679;422680;422681;422682;422683;422684;422685;422686;422687;422688;422689;422690;422691;422692;422693;422694;422695;422696;422697;422698;422699;422700;422701;422702;422703;422704;422705;422706 333455;333456;333457;333458;333459;333460;333461;333462;333463;333464;333465;333466;333467;333468;333469;333470;333471;333472;333473;333474;333475;333476;333477;333478;333479 333468 21 TAATSVPAYEPLDSLDR Unmodified 1804.8843 0.88430813 3997 Q96T37 RBM15 Putative RNA-binding protein 15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.911 76.971 2 2.8778E-31 88898 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 118.87 100.73 168230000 0 0 0 7447200 9738000 12275000 13732000 11241000 9174200 16795000 15439000 20963000 12428000 18796000 20195000 50414 3997 45248 422707;422708;422709;422710;422711;422712;422713;422714;422715;422716;422717;422718 333480;333481;333482;333483;333484;333485;333486;333487;333488 333487 9 TAAVALAK Unmodified 743.45414 0.45413923 2836 Q5W0V3 FAM160B1 Protein FAM160B1 yes yes 0 0 0 By MS/MS 2 0 1 1 26.246 21.986 1 0.034541 29240 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.77 46.522 15279000 0 15279000 0 0 0 0 0 0 0 0 0 0 0 0 0 50415 2836 45249 422719 333489 333489 1 TAAVANSMNYLTK Unmodified 1382.6864 0.68640036 4751 Q9NYU2 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 58.994 57.583 2 4.7157E-08 64721 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 124.42 86.12 83962000 19788000 0 0 0 0 15938000 0 0 0 0 9465500 0 0 15004000 23766000 50416 4751 45250 422720;422721;422722;422723;422724;422725;422726;422727;422728;422729 333490;333491;333492;333493;333494;333495;333496;333497;333498;333499 333493 10 TAAVANSMNYLTK Oxidation (M) 1398.6813 0.68131498 4751 Q9NYU2 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 44.095 38.089 2 3.0791E-13 49599 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.51 93.338 63220000 7805700 55414000 0 0 0 0 0 0 0 0 0 0 0 0 0 50417 4751 45250 422730;422731 333500;333501 333500 6128 2 TAAVWEEIVGESNDK Unmodified 1646.7788 0.77878042 3809 Q96EE3 SEH1L Nucleoporin SEH1 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 81.527 81.73 2 0.0002933 94261 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.252 57.063 14730000 0 0 0 0 0 0 0 2178400 0 0 0 0 0 0 12552000 50418 3809 45251 422732;422733 333502 333502 1 TAAWGTLGTLR Unmodified 1145.6193 0.61930707 572 O76027 ANXA9 Annexin A9 yes yes 0 0 0 By MS/MS 10 0 1 1 72.122 72.375 2 0.0080511 83316 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 52.49 31.19 4582900 0 0 0 0 0 0 0 0 0 0 4582900 0 0 0 0 50419 572 45252 422734 333503 333503 1 TAAWRTTSEEK Unmodified 1278.6204 0.62042929 1631 P50579 METAP2 Methionine aminopeptidase 2 yes yes 0 0 1 By MS/MS 2 0 1 1 21.647 16.827 2 0.037963 24022 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.607 31.578 8088000 8088000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50420 1631 45253 422735 333504 333504 0 TAAYVNAIEK Unmodified 1078.5659 0.56587452 721 P00367;P49448 GLUD1;GLUD2 Glutamate dehydrogenase 1, mitochondrial;Glutamate dehydrogenase 2, mitochondrial yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 41.06 41.336 2 0.0028825 46164 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 79.148 53.589 30289000 0 0 0 0 0 0 5821300 12660000 5334300 0 0 0 0 0 6473900 50421 721 45254 422736;422737;422738;422739 333505;333506;333507;333508 333508 4 TACLTSSSHK Unmodified 1090.5077 0.50770771 3285 Q8IYL3 C1orf174 UPF0688 protein C1orf174 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 7.7634 4.3843 2 0.017256 7926 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.568 41.673 17882000 8354400 9527400 0 0 0 0 0 0 0 0 0 0 0 0 0 50422 3285 45255 422740;422741 333509 333509 1 TACRDNTSVYHISGK Unmodified 1707.7999 0.79986699 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 24.048 23.363 3 9.712E-31 34204 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 128.45 124.09 96204000 47505000 0 2841100 2326400 4394500 4371500 5652800 3672200 3446800 0 0 0 7321400 6686800 7985700 50423 4634 45256 422742;422743;422744;422745;422746;422747;422748;422749;422750;422751;422752 333510;333511 333510 1 TACYDIDVEVDDPLK Unmodified 1751.7924 0.79238157 3688 Q92925 SMARCD2 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 83.77 77.345 2 0.00080228 99067 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.352 68.462 40722000 12921000 27801000 0 0 0 0 0 0 0 0 0 0 0 0 0 50424 3688 45257 422753;422754 333512;333513 333513 2 TADDPSLSLIK Unmodified 1158.6132 0.61321864 1403 P39656 DDOST Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 63.14 63.607 2 0.0025529 72945 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 79.974 40.952 14416000 0 0 0 0 0 0 0 0 0 0 0 14416000 0 0 0 50425 1403 45258 422755;422756;422757;422758;422759 333514;333515;333516;333517;333518 333514 5 TADEVPLK Unmodified 871.4651 0.46509784 4768 Q9NZI8 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.406 29.598 2 0.034963 30572 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 52.786 22.117 117790000 0 0 0 3455200 5059000 6558600 8284300 7213600 7282100 6809400 9135100 16665000 14225000 13664000 19440000 50426 4768 45259 422760;422761;422762;422763;422764;422765;422766;422767;422768;422769;422770;422771 333519 333519 1 TADGFAVPEPPK Unmodified 1227.6136 0.61355299 3199 Q86XP3 DDX42 ATP-dependent RNA helicase DDX42 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 62.39 61.618 2 3.5774E-15 78062 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 148.56 124.44 333700000 0 186580000 0 9177000 6236600 10652000 8960400 12099000 9311700 17244000 22084000 21653000 12074000 17631000 0 50427 3199 45260 422772;422773;422774;422775;422776;422777;422778;422779;422780;422781;422782;422783;422784 333520;333521;333522;333523;333524;333525;333526;333527;333528;333529;333530;333531;333532;333533;333534;333535;333536;333537;333538;333539;333540;333541 333527 21 TADGIVSHLK Unmodified 1039.5662 0.56620887 1270 P30101 PDIA3 Protein disulfide-isomerase A3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38.116 37.208 2 0.0012253 52537 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 112.01 76.136 635480000 53595000 34679000 22240000 18376000 17469000 19385000 23096000 19945000 18000000 23917000 66217000 79275000 31078000 40169000 168030000 50428 1270 45261 422785;422786;422787;422788;422789;422790;422791;422792;422793;422794;422795;422796;422797;422798;422799 333542;333543;333544;333545;333546;333547;333548;333549;333550;333551;333552;333553;333554 333548 13 TADHLFDAAYFGQK Unmodified 1582.7416 0.74160705 217 O14802 POLR3A DNA-directed RNA polymerase III subunit RPC1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 75.201 74.126 3 0.00029867 95503 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.309 46.629 42011000 10440000 0 6895700 0 0 2528300 0 0 0 3987800 2785400 2769400 3406800 2627300 6570600 50429 217 45262 422800;422801;422802;422803;422804;422805;422806;422807;422808 333555;333556;333557;333558;333559 333556 5 TADMDVGQIGFHR Unmodified 1445.6721 0.67214728 3185 Q86WR0 CCDC25 Coiled-coil domain-containing protein 25 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 8 3.46 1 3 1 1 1 1 60.135 59.481 3 0.021547 66898 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.782 31.25 22788000 0 0 2891500 0 0 4345800 0 0 0 0 0 5171400 0 0 10379000 50430 3185 45263 422809;422810;422811;422812 333560;333561 333560 2 TADMDVGQIGFHRQK Oxidation (M) 1717.8206 0.82060243 3185 Q86WR0 CCDC25 Coiled-coil domain-containing protein 25 yes yes 0 1 1 By MS/MS 2 0 1 1 42.894 36.101 3 0.0052722 49755 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.988 44.317 10089000 10089000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50431 3185 45264 422813 333562 333562 4812 1 TADMDVGQIGFHRQK Unmodified 1701.8257 0.82568781 3185 Q86WR0 CCDC25 Coiled-coil domain-containing protein 25 yes yes 0 0 1 By MS/MS 2 0 2 2 58.558 50.353 3;4 0.0067263 68524 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.227 34.867 24650000 24650000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50432 3185 45264 422814;422815 333563;333564 333563 2 TADRNLQK Unmodified 944.50394 0.50394296 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 0 1 By matching By MS/MS 2 0 2 1 1 5.7023 2.3934 2 0.014742 4391 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.58 54.443 489780000 271420000 218360000 0 0 0 0 0 0 0 0 0 0 0 0 0 50433 4634 45265 422816;422817 333565 333565 1 TADRQYMEGFNDELEAFK Oxidation (M) 2178.9528 0.9527984 2612 Q16543 CDC37 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed yes yes 0 1 1 By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.91 3.42 2 1 8 2 1 1 1 1 1 1 1 1 1 74.957 74.096 3 5.5291E-14 90131 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 108.49 105.05 277660000 0 179130000 25344000 0 0 7480000 1931000 0 5936300 0 12830000 9087900 4779100 7079200 24061000 50434 2612 45266 422818;422819;422820;422821;422822;422823;422824;422825;422826;422827;422828 333566;333567;333568;333569;333570 333570 4262 5 TADRQYMEGFNDELEAFK Unmodified 2162.9579 0.95788377 2612 Q16543 CDC37 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 3.8 3.12 3 1 1 1 2 1 1 83.588 79.91 3 6.4634E-14 101211 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.755 78.102 682480000 136150000 521460000 18395000 0 0 0 0 0 0 0 0 0 0 0 6472800 50435 2612 45266 422829;422830;422831;422832;422833 333571;333572;333573;333574;333575 333574 5 TADSEVNTDQDIEK Unmodified 1563.69 0.69002499 3414 Q8ND24 RNF214 RING finger protein 214 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.23 27.428 2 5.4434E-117 28445 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 206.27 179.75 276190000 0 0 0 16704000 17732000 22910000 22496000 22195000 18046000 20397000 30050000 26516000 25265000 20455000 33426000 50436 3414 45267 422834;422835;422836;422837;422838;422839;422840;422841;422842;422843;422844;422845 333576;333577;333578;333579;333580;333581;333582;333583;333584;333585;333586;333587 333579 12 TADSQETK Unmodified 878.39814 0.39814049 1183 P25205 MCM3 DNA replication licensing factor MCM3 yes yes 0 0 0 By MS/MS 1 0 1 1 106.7 111.96 2 0.0024122 92707 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 125.81 74.479 49411000 49411000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50437 1183 45268 422846 333588 333588 1 TADSVSPLEPPTK Unmodified 1340.6824 0.68236084 5023 Q9UMZ2 SYNRG Synergin gamma yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 47.701 48.433 2 0.00075346 53347 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.03 59.317 7240900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7240900 50438 5023 45269 422847;422848 333589;333590 333589 2 TADVTSLFGGEDTSR Unmodified 1554.7162 0.71618016 156 O00443 PIK3C2A Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 72.326 72.352 2 0.00022733 82327 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 85.845 73.269 51429000 0 0 0 3858000 3873400 4827200 5182700 0 4886200 5050300 4884700 8483300 5677500 4705700 0 50439 156 45270 422849;422850;422851;422852;422853;422854;422855;422856;422857;422858 333591;333592;333593;333594;333595;333596;333597;333598 333596 7 TAEAGGVTGK Unmodified 889.45051 0.45051041 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 5.75 4.26 3 3 6 2 3 1 1 1 1 1 1 1 32.009 31.916 2 0.0036161 93080 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 93.598 30.45 411100000 142710000 239870000 7096000 0 2749700 7053000 0 0 3779500 0 2495400 1665200 0 0 3673500 50440 894 45271 422859;422860;422861;422862;422863;422864;422865;422866;422867;422868;422869;422870 333599;333600;333601;333602;333603;333604;333605 333601 7 TAEDDETPVDLNK Unmodified 1445.6522 0.65218292 156 O00443 PIK3C2A Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.935 39.116 2 1.2844E-07 43214 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 116.77 110.18 56940000 0 0 0 2999300 2562400 5233300 4353500 3475800 3014400 4643800 7640800 6369700 6638300 3957100 6051800 50441 156 45272 422871;422872;422873;422874;422875;422876;422877;422878;422879;422880;422881;422882 333606;333607;333608;333609;333610;333611;333612;333613;333614;333615;333616;333617 333611 12 TAEDSTAAMSSDSAAGSSAK Oxidation (M) 1859.7691 0.76907995 2 A0AV96 RBM47 RNA-binding protein 47 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 11.621 11.753 2 3.722E-47 10807 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 114.74 114.74 84639000 0 0 0 7715500 5110600 5088600 0 5457700 8148300 7542700 0 16081000 12282000 8378600 8833400 50442 2 45273 422883;422884;422885;422886;422887;422888;422889;422890;422891;422892 333618;333619;333620;333621;333622;333623;333624;333625;333626;333627 333618 2 10 TAEDSTAAMSSDSAAGSSAK Unmodified 1843.7742 0.77416533 2 A0AV96 RBM47 RNA-binding protein 47 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.457 22.662 2 1.1982E-193 23183 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 273.61 270.39 228510000 0 0 0 11995000 7774500 10984000 13868000 14441000 12332000 19276000 37090000 32922000 19622000 22508000 25694000 50443 2 45273 422893;422894;422895;422896;422897;422898;422899;422900;422901;422902;422903;422904 333628;333629;333630;333631;333632;333633;333634;333635;333636;333637 333632 10 TAEDYSVDENGQR Unmodified 1482.6223 0.62227978 403 O60488 ACSL4 Long-chain-fatty-acid--CoA ligase 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.53 23.734 2 8.8637E-13 24053 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 157.24 151.93 176060000 0 0 0 12099000 9144000 10882000 12061000 15329000 8902100 14348000 20161000 17914000 17023000 13612000 24581000 50444 403 45274 422905;422906;422907;422908;422909;422910;422911;422912;422913;422914;422915;422916 333638;333639;333640;333641;333642;333643;333644;333645;333646;333647;333648;333649 333641 12 TAEEENPEHVEIQK Unmodified 1651.7689 0.76894402 169 O00566 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.86 3.4 1 1 5 2 1 1 1 1 1 32.374 31.045 3 0.0065436 40017 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 37.092 26.97 58737000 0 25259000 0 6130400 7320200 7015900 4698300 0 0 0 0 8313500 0 0 0 50445 169 45275 422917;422918;422919;422920;422921;422922;422923 333650;333651 333651 2 TAEEICESSSK Unmodified 1239.5289 0.52889667 4217 Q9BX10 GTPBP2 GTP-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 13.817 13.968 2 0.0052839 12450 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 73.233 66.409 13485000 0 0 0 1244900 1443900 1056400 0 0 0 1646600 2230500 0 1775500 1801400 2285800 50446 4217 45276 422924;422925;422926;422927;422928;422929;422930;422931 333652;333653;333654;333655 333654 4 TAEELENEDLK Unmodified 1289.5987 0.59869079 3609 Q92503 SEC14L1 SEC14-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.407 36.588 2 3.8007E-11 40282 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 155.42 121.33 729570000 0 0 0 46618000 44924000 54025000 47012000 61552000 48754000 58101000 62221000 96677000 75068000 74845000 59777000 50447 3609 45277 422932;422933;422934;422935;422936;422937;422938;422939;422940;422941;422942;422943 333656;333657;333658;333659;333660;333661;333662;333663;333664;333665;333666 333663 11 TAEELMNFSK Oxidation (M) 1184.5383 0.53833914 1641 P50990 CCT8 T-complex protein 1 subunit theta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.54 3.64 1 7 3 24 3 7 1 2 2 2 2 2 2 2 2 2 2 2 2 43.077 41.988 2 4.417E-06 49566 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145.46 63.22 3384600000 107740000 2055900000 27308000 65303000 45495000 105260000 80891000 64370000 54185000 129370000 123260000 171310000 110790000 95174000 148270000 50448 1641 45278 422944;422945;422946;422947;422948;422949;422950;422951;422952;422953;422954;422955;422956;422957;422958;422959;422960;422961;422962;422963;422964;422965;422966;422967;422968;422969;422970;422971;422972;422973;422974;422975;422976;422977;422978 333667;333668;333669;333670;333671;333672;333673;333674;333675;333676;333677;333678;333679;333680;333681;333682;333683;333684;333685;333686;333687;333688;333689;333690;333691;333692;333693;333694;333695;333696;333697;333698;333699;333700;333701 333674 2639 25 TAEELMNFSK Unmodified 1168.5434 0.54342452 1641 P50990 CCT8 T-complex protein 1 subunit theta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.59 3.74 1 4 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 63.354 62.337 2 7.4903E-08 67056 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 152.11 134.82 7048100000 97477000 5562700000 47362000 55377000 46290000 118490000 79387000 78556000 61947000 114480000 172290000 112560000 101590000 138150000 261450000 50449 1641 45278 422979;422980;422981;422982;422983;422984;422985;422986;422987;422988;422989;422990;422991;422992;422993;422994;422995 333702;333703;333704;333705;333706;333707;333708;333709;333710;333711;333712;333713;333714;333715;333716;333717;333718;333719;333720;333721;333722;333723;333724;333725;333726;333727;333728 333712 26 TAEEPPQEK Unmodified 1027.4822 0.48220447 360 O43719 HTATSF1 HIV Tat-specific factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 8.8697 8.9827 2 0.00286 7271 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 136.27 121.75 120780000 0 0 0 6837300 7460600 6077900 9720400 5860300 4953700 8473700 0 20466000 16790000 13044000 21100000 50450 360 45279 422996;422997;422998;422999;423000;423001;423002;423003;423004;423005;423006 333729;333730;333731;333732;333733;333734;333735;333736;333737;333738;333739 333736 10 TAEEQGELAFQDAK Unmodified 1535.7104 0.71036651 99 Q6KB66;CON__Q6KB66-1 KRT80 Keratin, type II cytoskeletal 80 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.778 48.937 2 2.3227E-32 55708 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 159.94 135.91 + 317520000 0 0 0 57571000 13601000 20050000 14882000 28748000 13012000 41254000 22870000 48171000 25354000 10362000 21650000 50451 99 45280 423007;423008;423009;423010;423011;423012;423013;423014;423015;423016;423017;423018 333740;333741;333742;333743;333744;333745;333746;333747;333748;333749;333750;333751;333752;333753 333752 14 TAEEVAALIR Unmodified 1071.5924 0.59242362 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.28 65.368 2 0.0009285 74773 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 112.84 83.74 366040000 0 0 0 20118000 20102000 22746000 22231000 35843000 21070000 33047000 33137000 46809000 33265000 36003000 41665000 50452 2930 45281 423019;423020;423021;423022;423023;423024;423025;423026;423027;423028;423029;423030 333754;333755;333756;333757;333758;333759;333760;333761;333762;333763;333764;333765 333755 11 TAEEVAALIRSLPVEEQPK Unmodified 2079.1212 0.12118435 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 93.007 88.327 3 9.6132E-06 111233 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.08 73.419 79418000 9450300 62392000 7575800 0 0 0 0 0 0 0 0 0 0 0 0 50453 2930 45282 423031;423032;423033;423034 333766;333767;333768;333769 333766 4 TAEFQVAR Unmodified 920.47158 0.4715802 4625 Q9NSD9 FARSB Phenylalanine--tRNA ligase beta subunit yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.382 32.568 2 0.00622 35593 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 102.71 65.155 102050000 0 0 0 4884000 5305700 6910500 6204900 5275100 5117000 7062300 13908000 10212000 10347000 10535000 16285000 50454 4625 45283 423035;423036;423037;423038;423039;423040;423041;423042;423043;423044;423045;423046 333770;333771;333772;333773;333774;333775;333776;333777 333770 8 TAEGAPGAGLQR Unmodified 1126.5731 0.57308516 4272 Q9BZL4 PPP1R12C Protein phosphatase 1 regulatory subunit 12C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 23.143 23.287 2 0.0014245 23106 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 67.993 52.553 20380000 0 0 0 1942100 2398400 1772300 0 2633800 2010100 0 0 0 2850800 2245000 4527200 50455 4272 45284 423047;423048;423049;423050;423051;423052;423053;423054 333778;333779;333780;333781;333782 333780 5 TAEHFQEAMEESK Unmodified 1535.6562 0.65622244 4110 Q9BRK5 SDF4 45 kDa calcium-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.87 3.84 5 1 9 1 3 2 1 1 1 1 1 1 1 1 1 34.024 32.199 2;3 1.6792E-33 40640 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 153.39 146.51 221510000 9215600 131430000 21575000 0 0 6737500 8151500 6915100 5357100 0 7763100 0 7444900 5394800 11525000 50456 4110 45285 423055;423056;423057;423058;423059;423060;423061;423062;423063;423064;423065;423066;423067;423068;423069 333783;333784;333785;333786;333787;333788;333789;333790;333791;333792;333793;333794 333791 11 TAEHFQEAMEESK Oxidation (M) 1551.6511 0.65113707 4110 Q9BRK5 SDF4 45 kDa calcium-binding protein yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 20.163 16.949 2 0.0018318 22341 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.226 72.006 19063000 0 14426000 4637200 0 0 0 0 0 0 0 0 0 0 0 0 50457 4110 45285 423070;423071 333795;333796 333795 5607 2 TAEIVYAATTSLRQANQEK Unmodified 2093.0753 0.075296793 4584 Q9NR09 BIRC6 Baculoviral IAP repeat-containing protein 6 yes yes 0 0 1 By MS/MS 2 0 1 1 78.614 70.484 3 0.0025086 92672 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.908 38.81 9854900 9854900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50458 4584 45286 423072 333797 333797 1 TAELPPLK Unmodified 867.50657 0.50656873 2454 Q14914 PTGR1 Prostaglandin reductase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.57 3.85 3 1 3 1 2 1 1 1 1 50.867 47.763 2 0.01026 53485 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.229 56.026 893030000 19448000 825000000 8393600 0 0 0 2803500 0 0 0 0 0 0 9262600 28127000 50459 2454 45287 423073;423074;423075;423076;423077;423078;423079 333798;333799;333800;333801;333802;333803;333804;333805;333806;333807;333808;333809 333803 12 TAELSGSSSTLEPIISSSAHHVTTVNSTNCK Unmodified 3214.5412 0.54119927 1600 P49790 NUP153 Nuclear pore complex protein Nup153 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 77.331 71.884 4 1.9088E-50 92729 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.67 99.24 251780000 214340000 0 37440000 0 0 0 0 0 0 0 0 0 0 0 0 50460 1600 45288 423080;423081 333810;333811;333812 333810 3 TAENATSGETLEENEAGD Unmodified 1836.7497 0.74972472 5067 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.7 4.08 4 2 2 12 3 5 1 1 1 1 1 1 1 1 1 1 1 1 41.939 41.824 2 3.6108E-226 48291 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 253.42 250.92 412820000 108900000 55907000 0 6572700 5213700 6937900 6349800 5673100 4772900 11680000 33863000 33998000 10948000 34434000 87575000 50461 5067 45289 423082;423083;423084;423085;423086;423087;423088;423089;423090;423091;423092;423093;423094;423095;423096;423097;423098;423099;423100;423101 333813;333814;333815;333816;333817;333818;333819;333820;333821;333822;333823;333824;333825;333826;333827;333828;333829;333830;333831;333832;333833;333834 333820 22 TAENFRALCTGEK Unmodified 1495.7089 0.70892672 1601;2162;1278 P49792;Q08752;P30405 RANBP2;PPID;PPIF E3 SUMO-protein ligase RanBP2;Peptidyl-prolyl cis-trans isomerase D;Peptidyl-prolyl cis-trans isomerase F, mitochondrial no no 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 45.025 38.624 2;3 3.1466E-24 52482 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 182.1 141.6 308670000 257970000 50700000 0 0 0 0 0 0 0 0 0 0 0 0 0 50462 1601;2162;1278 45290 423102;423103;423104 333835;333836;333837;333838;333839 333838 4 TAENFRALSTGEK Unmodified 1422.7103 0.71030693 1931 P62937;P0DN26;A0A0B4J2A2;A0A075B767;A0A075B759;Q9Y536;F5H284;P0DN37 PPIA;PPIAL4C;PPIAL4E;PPIAL4A;PPIAL4D Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase A-like 4A/B/C;Peptidyl-prolyl cis-trans isomerase A-like 4D yes no 0 0 1 By MS/MS By MS/MS By MS/MS 2.06 0.353 1 27 3 16 3 12 51.346 46.375 2;3 3.1273E-88 94990 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 240.65 197.37 45814000000 24103000000 8976100000 12735000000 0 0 0 0 0 0 0 0 0 0 0 0 50463 1931 45291 423105;423106;423107;423108;423109;423110;423111;423112;423113;423114;423115;423116;423117;423118;423119;423120;423121;423122;423123;423124;423125;423126;423127;423128;423129;423130;423131;423132;423133;423134;423135 333840;333841;333842;333843;333844;333845;333846;333847;333848;333849;333850;333851;333852;333853;333854;333855;333856;333857;333858;333859;333860;333861;333862;333863;333864;333865;333866;333867;333868;333869;333870;333871;333872;333873;333874;333875;333876;333877;333878;333879;333880;333881;333882;333883;333884;333885;333886;333887;333888 333857 44 TAEPAQPSSASGSGNSDDAIR Unmodified 2016.8985 0.89845464 1406 P39880 CUX1 Homeobox protein cut-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.125 29.317 2 1.9248E-73 31702 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 185.27 176.76 269500000 0 0 0 16759000 13788000 16545000 20823000 14236000 12642000 25203000 25240000 36303000 24248000 22222000 41486000 50464 1406 45292 423136;423137;423138;423139;423140;423141;423142;423143;423144;423145;423146;423147 333889;333890;333891;333892;333893;333894;333895;333896;333897;333898;333899;333900;333901;333902;333903;333904;333905 333900 17 TAESESLDSK Unmodified 1065.4826 0.4825984 3179 Q86W56 PARG Poly(ADP-ribose) glycohydrolase yes yes 0 0 0 By MS/MS 10 0 1 1 9.702 10.108 2 0.0063431 8469 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 65.305 47.32 2060900 0 0 0 0 0 0 0 0 0 0 2060900 0 0 0 0 50465 3179 45293 423148 333906 333906 1 TAESQTPTPSATSFFSGK Unmodified 1842.8636 0.86357268 1766 P55265 ADAR Double-stranded RNA-specific adenosine deaminase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 4 1 1 1 1 1 1 1 1 1 1 1 1 71.459 70.438 2;3 7.0256E-73 87940 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 212.95 202.4 401860000 0 291890000 0 3782300 4533300 7181300 5903700 5704800 6512300 8967800 10215000 13859000 11199000 10714000 21390000 50466 1766 45294 423149;423150;423151;423152;423153;423154;423155;423156;423157;423158;423159;423160;423161;423162;423163;423164 333907;333908;333909;333910;333911;333912;333913;333914;333915;333916;333917;333918;333919;333920;333921;333922 333911 15 TAETDVLFNK Unmodified 1136.5714 0.57135383 1738 P54277 PMS1 PMS1 protein homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.86 3.4 1 1 5 2 2 1 1 1 55.145 53.212 2 0.0015118 60471 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 90.601 58.666 92071000 0 49996000 0 0 0 0 12391000 0 0 0 0 0 17460000 0 12223000 50467 1738 45295 423165;423166;423167;423168;423169;423170;423171 333923;333924;333925;333926;333927;333928;333929 333929 7 TAETETSRSREESADAPVDQNSVVIPAAAK Unmodified 3128.5222 0.52217839 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 0 2 By MS/MS 2 0 1 1 57.574 53.748 4 0.00018271 67035 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 36.767 34.19 5957200 0 0 5957200 0 0 0 0 0 0 0 0 0 0 0 0 50468 2193 45296 423172 333930 333930 1 TAETGYIQR Unmodified 1037.5142 0.5141733 1179 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 23.371 23.644 2 0.012702 24356 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.91 48.554 12962000 0 0 0 2986700 0 0 0 0 0 0 0 4644900 0 5330100 0 50469 1179 45297 423173;423174;423175 333931;333932 333932 2 TAETGYMQR Unmodified 1055.4706 0.47059393 217 O14802 POLR3A DNA-directed RNA polymerase III subunit RPC1 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 19.588 19.886 2 0.042904 19422 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.808 18.358 4654600 0 0 0 0 0 0 1306600 0 0 0 0 0 0 0 3348000 50470 217 45298 423176;423177 333933 333933 1 TAEVLANK Unmodified 844.46543 0.46543219 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 15.949 16.108 2 0.03403 16227 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 53.351 22.79 129120000 0 0 0 10600000 11052000 0 12755000 8364400 9084100 0 0 19562000 20397000 17593000 19713000 50471 2392 45299 423178;423179;423180;423181;423182;423183;423184;423185;423186 333934 333934 1 TAEVPVSEASGQAPPAK Unmodified 1637.8261 0.82606496 1536 P48382 RFX5 DNA-binding protein RFX5 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 2 1 1 40.483 40.695 2 0.003722 45238 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 44.299 26.435 34439000 0 0 0 2587800 3273200 0 0 3194700 2277400 0 4059200 12300000 4367200 2379700 0 50472 1536 45300 423187;423188;423189;423190;423191;423192;423193;423194;423195 333935;333936;333937;333938;333939 333935 5 TAFASSDCSAAPLEMMENFPK Unmodified 2302.9908 0.99084016 4630 Q9NSV4 DIAPH3 Protein diaphanous homolog 3 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 92.673 90.31 2 9.2217E-07 111935 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.939 92.475 44965000 0 42551000 0 0 0 0 0 0 0 0 0 0 0 0 2414000 50473 4630 45301 423196;423197 333940;333941 333940 2 TAFDDAIAELDTLNEDSYK Unmodified 2129.9641 0.96407459 1869 P61981 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.17 3.4 1 12 5 6 7 10 1 1 2 1 2 93.931 90.297 2;3 0 113695 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 382.94 377.66 7066800000 1212900000 5788200000 43403000 0 0 0 0 0 0 2448800 4372100 1689700 0 0 13842000 50474 1869 45302 423198;423199;423200;423201;423202;423203;423204;423205;423206;423207;423208;423209;423210;423211;423212;423213;423214;423215;423216;423217;423218;423219;423220;423221 333942;333943;333944;333945;333946;333947;333948;333949;333950;333951;333952;333953;333954;333955;333956;333957;333958;333959;333960;333961 333947 17 TAFDEAIAELDTLNEDSYK Unmodified 2143.9797 0.97972465 1214 P27348 YWHAQ 14-3-3 protein theta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.74 3.61 1 7 5 6 3 9 1 2 2 2 96.352 93.576 2;3 2.0343E-182 114559 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 239.86 227.38 4962300000 569240000 4342000000 34330000 0 0 0 0 0 0 4887700 3197000 0 0 0 8699000 50475 1214 45303 423222;423223;423224;423225;423226;423227;423228;423229;423230;423231;423232;423233;423234;423235;423236;423237;423238;423239;423240 333962;333963;333964;333965;333966;333967;333968;333969;333970;333971;333972;333973;333974;333975;333976;333977;333978;333979;333980 333964 16 TAFDEAIAELDTLNEESYK Unmodified 2157.9954 0.99537472 1311 P31946 YWHAB 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.21 3.38 1 11 6 6 3 13 2 2 2 2 94.918 92.008 2;3 0 115055 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 375.79 367.66 8981600000 75659000 8797900000 91207000 0 0 0 0 0 0 2663500 3623500 0 0 0 10545000 50476 1311 45304 423241;423242;423243;423244;423245;423246;423247;423248;423249;423250;423251;423252;423253;423254;423255;423256;423257;423258;423259;423260;423261;423262;423263;423264 333981;333982;333983;333984;333985;333986;333987;333988;333989;333990;333991;333992;333993;333994;333995;333996;333997;333998;333999;334000;334001;334002;334003;334004 333992 23 TAFDEAIAELDTLSEESYK Unmodified 2130.9845 0.98447568 1940 P63104 YWHAZ 14-3-3 protein zeta/delta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2.72 1.96 2 19 9 2 9 17 4 1 1 98.321 94.729 2;3 7.8968E-167 113951 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 308.74 304.67 31246000000 8504400000 22202000000 533540000 1248000 0 0 0 0 0 0 0 0 0 0 4989200 50477 1940 45305 423265;423266;423267;423268;423269;423270;423271;423272;423273;423274;423275;423276;423277;423278;423279;423280;423281;423282;423283;423284;423285;423286;423287;423288;423289;423290;423291;423292;423293;423294;423295;423296 334005;334006;334007;334008;334009;334010;334011;334012;334013;334014;334015;334016;334017;334018;334019;334020;334021;334022;334023;334024;334025;334026;334027;334028;334029;334030;334031;334032;334033;334034;334035;334036;334037;334038;334039;334040;334041 334027 31 TAFDLLNLNR Unmodified 1175.6299 0.62987176 4982 Q9UL03 INTS6 Integrator complex subunit 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 83.872 84.011 2 0.0014968 97299 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 90.709 64.325 82896000 0 0 0 0 0 9534000 6093700 7848600 5226500 9047000 7891500 9536800 7512700 8218700 11986000 50478 4982 45306 423297;423298;423299;423300;423301;423302;423303;423304;423305;423306;423307 334042;334043;334044;334045;334046;334047;334048;334049;334050;334051;334052;334053 334043 12 TAFEEVEEDLR Unmodified 1336.6147 0.61467521 2914 Q6P158 DHX57 Putative ATP-dependent RNA helicase DHX57 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.5 0.5 2 2 2 1 1 69.927 64.512 2 0.023489 85265 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.827 57.065 387450000 330870000 51203000 5370300 0 0 0 0 0 0 0 0 0 0 0 0 50479 2914 45307 423308;423309;423310;423311 334054;334055;334056;334057 334056 2 TAFGIISTVK Unmodified 1035.5964 0.59644637 1976 P78346 RPP30 Ribonuclease P protein subunit p30 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73.12 72.13 2 0.0069515 91538 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.525 57.006 522880000 238250000 56432000 39429000 12452000 11277000 14075000 12166000 10849000 9424500 16791000 18321000 20675000 16739000 16418000 29578000 50480 1976 45308 423312;423313;423314;423315;423316;423317;423318;423319;423320;423321;423322;423323;423324;423325;423326 334058;334059;334060;334061;334062;334063;334064;334065;334066 334060 8 TAFHQEQGHQLLK Unmodified 1535.7845 0.78447492 1661 P51580 TPMT Thiopurine S-methyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 3.33 2.98 5 1 3 2 1 38.852 32.928 2;3;4 3.6167E-13 45420 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 122.42 97.035 208460000 170320000 38147000 0 0 0 0 0 0 0 0 0 0 0 0 0 50481 1661 45309 423327;423328;423329;423330;423331;423332 334067;334068;334069;334070;334071 334069 3 TAFLTVVK Unmodified 877.5273 0.52730417 2164 Q08AD1 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.212 63.306 2 0.011957 73023 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 75.738 46.4 133600000 0 0 0 9488800 7409600 10462000 9516400 8531900 7362600 14104000 15391000 15872000 9431100 8632700 17402000 50482 2164 45310 423333;423334;423335;423336;423337;423338;423339;423340;423341;423342;423343;423344 334072;334073;334074;334075;334076;334077;334078;334079;334080;334081;334082 334082 11 TAFQEALDAAGDK Unmodified 1335.6307 0.63065962 923 P10599 TXN Thioredoxin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3.81 3.44 10 22 8 12 16 17 7 1 1 1 1 1 1 1 1 1 1 1 1 68.336 66.203 2 1.8667E-09 84327 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 133.07 133.07 45972000000 2268900000 32841000000 702070000 776300000 269150000 370750000 407050000 433430000 335720000 538000000 1145400000 1650300000 440530000 930430000 2863000000 50483 923 45311 423345;423346;423347;423348;423349;423350;423351;423352;423353;423354;423355;423356;423357;423358;423359;423360;423361;423362;423363;423364;423365;423366;423367;423368;423369;423370;423371;423372;423373;423374;423375;423376;423377;423378;423379;423380;423381;423382;423383;423384;423385;423386;423387;423388;423389;423390;423391;423392;423393;423394;423395;423396 334083;334084;334085;334086;334087;334088;334089;334090;334091;334092;334093;334094;334095;334096;334097;334098;334099;334100;334101;334102;334103;334104;334105;334106;334107;334108;334109;334110;334111;334112;334113;334114;334115;334116;334117;334118;334119;334120;334121;334122;334123;334124;334125;334126;334127;334128;334129;334130;334131;334132;334133;334134;334135;334136;334137;334138;334139;334140;334141;334142;334143;334144;334145;334146 334126 64 TAFQPVPR Unmodified 914.4974 0.49740102 1983 P78415 IRX3 Iroquois-class homeodomain protein IRX-3 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.734 37.915 2 0.0068411 41807 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 94.407 81.855 475840000 0 0 0 29712000 34934000 33385000 43024000 48950000 26654000 37728000 49177000 34114000 62152000 41334000 34680000 50484 1983 45312 423397;423398;423399;423400;423401;423402;423403;423404;423405;423406;423407;423408 334147;334148;334149;334150;334151;334152;334153;334154;334155;334156 334155 6 TAFSENEDDESRPAVALIR Unmodified 2119.0182 0.018175845 5004 Q9ULT8 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 66.836 66.862 3 0.0033118 75835 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.625 26.806 31317000 0 0 0 3066400 2120200 0 2050400 0 0 6004400 0 5291600 4592300 0 8192000 50485 5004 45313 423409;423410;423411;423412;423413;423414;423415 334157;334158;334159 334158 3 TAFSENEDDESRPAVALIRK Unmodified 2247.1131 0.11313886 5004 Q9ULT8 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 0 0 2 By MS/MS By MS/MS 6 4 1 1 1 1 61.929 58.087 4 0.00073056 79152 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.094 41.431 24846000 15748000 0 0 0 0 0 0 0 0 0 0 0 0 0 9098200 50486 5004 45314 423416;423417 334160;334161 334161 2 TAGAPTGTVPQQLQVHGVQQSVPVTQER Unmodified 2912.5104 0.51043191 1142 P22670 RFX1 MHC class II regulatory factor RFX1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.615 69.688 3 3.144E-50 80139 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 98.326 91.893 173670000 0 0 0 7963100 9840800 18404000 13687000 11977000 10202000 17921000 14104000 19286000 12247000 15004000 23036000 50487 1142 45315 423418;423419;423420;423421;423422;423423;423424;423425;423426;423427;423428;423429 334162;334163;334164;334165;334166;334167;334168;334169;334170;334171;334172 334172 11 TAGEEEMIK Unmodified 1006.4641 0.46411156 2404 Q14331 FRG1 Protein FRG1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 24.835 25.061 2 0.013573 27065 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 59.597 42.357 82854000 0 0 0 5681000 5431600 7787000 0 0 4263500 9572100 8319800 12527000 9241900 5456900 14573000 50488 2404 45316 423430;423431;423432;423433;423434;423435;423436;423437;423438;423439 334173 334173 1 TAGELNLLDSDLDVDTK Unmodified 1817.8895 0.88945308 246 O15056 SYNJ2 Synaptojanin-2 yes yes 0 0 0 By MS/MS 2 0 1 1 87.547 82.738 2 5.5605E-05 102931 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.861 74.92 17630000 0 17630000 0 0 0 0 0 0 0 0 0 0 0 0 0 50489 246 45317 423440 334174;334175 334175 2 TAGINVRK Unmodified 857.5083 0.50830006 1642 P50991 CCT4 T-complex protein 1 subunit delta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 14.946 11.693 2 0.029491 17474 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 114.19 49.409 622790000 508750000 91956000 22089000 0 0 0 0 0 0 0 0 0 0 0 0 50490 1642 45318 423441;423442;423443 334176;334177 334177 1 TAGLRPMETK Unmodified 1102.5805 0.58047873 1280 P30419 NMT1 Glycylpeptide N-tetradecanoyltransferase 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 27.026 22.403 2 0.014812 32240 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.95 61.823 117550000 111110000 0 6436300 0 0 0 0 0 0 0 0 0 0 0 0 50491 1280 45319 423444;423445;423446 334178;334179 334178 1 TAGLRPMETK Oxidation (M) 1118.5754 0.57539335 1280 P30419 NMT1 Glycylpeptide N-tetradecanoyltransferase 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 14.303 11.089 2 0.012186 16334 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 100.02 64.572 138850000 110750000 6894800 21210000 0 0 0 0 0 0 0 0 0 0 0 0 50492 1280 45319 423447;423448;423449 334180 334180 1884 0 TAGLVMTHLILK Unmodified 1295.7635 0.76352847 2476 Q15021 NCAPD2 Condensin complex subunit 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 77.942 78.076 3 0.0014095 89652 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.727 54.998 21342000 0 0 0 0 0 4204800 0 2381800 0 3087700 0 0 0 3322700 8344900 50493 2476 45320 423450;423451;423452;423453;423454 334181;334182 334182 2 TAGNSEFLGK Unmodified 1022.5033 0.50327426 1974 P78344 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30.878 30.072 2 0.00012191 38590 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.15 79.886 3210600000 8744600 445290000 2510900 173290000 177450000 194470000 215440000 173770000 181510000 238960000 250330000 323210000 289010000 224570000 312010000 50494 1974 45321 423455;423456;423457;423458;423459;423460;423461;423462;423463;423464;423465;423466;423467;423468;423469 334183;334184;334185;334186;334187;334188;334189;334190;334191;334192;334193;334194;334195;334196;334197;334198 334186 15 TAGPAVHLK Unmodified 892.51305 0.51305109 5124 Q9Y2X0 MED16 Mediator of RNA polymerase II transcription subunit 16 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 52.114 46.102 2 0.018361 63587 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.741 10.748 18590000 15504000 0 3085900 0 0 0 0 0 0 0 0 0 0 0 0 50495 5124 45322 423470;423471 334199 334199 1 TAGPIASAQK Unmodified 942.51345 0.51344502 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 15.848 15.097 2 0.00091752 13947 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 114.19 50.621 1046800000 35648000 609050000 5448900 19765000 15916000 16932000 23809000 17341000 15984000 28470000 49209000 53370000 42878000 48854000 64104000 50496 1226 45323 423472;423473;423474;423475;423476;423477;423478;423479;423480;423481;423482;423483;423484;423485;423486;423487 334200;334201;334202;334203;334204;334205;334206;334207;334208;334209;334210;334211;334212;334213 334211 11 TAGPQSQVLCGVVMDR Oxidation (M) 1732.8236 0.8236389 1361 P35611 ADD1 Alpha-adducin yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 63.974 64.124 2 1.2792E-06 73271 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 83.314 74.126 11217000 0 0 0 0 0 0 4018800 2303400 0 4895100 0 0 0 0 0 50497 1361 45324 423488;423489;423490;423491;423492 334214;334215;334216;334217 334216 2105 4 TAGPQSQVLCGVVMDR Unmodified 1716.8287 0.82872428 1361 P35611 ADD1 Alpha-adducin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 72.192 72.481 2 0.0014172 83240 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 65.563 41.271 23674000 0 0 0 0 0 0 4686200 0 0 0 0 7141200 0 0 11846000 50498 1361 45324 423493;423494;423495 334218;334219;334220 334218 2 TAGQPEGGPGADFGQSCFPAEAGRDTLSR Unmodified 2935.3155 0.31549685 2439 Q14694 USP10 Ubiquitin carboxyl-terminal hydrolase 10 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.844 70.916 3 4.9106E-43 81059 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 92.833 90.184 102450000 0 0 0 4504000 4299700 9244700 5273700 8366300 5345300 12704000 11136000 12966000 9315800 6088200 13205000 50499 2439 45325 423496;423497;423498;423499;423500;423501;423502;423503;423504;423505;423506;423507 334221;334222;334223;334224;334225;334226;334227;334228;334229;334230;334231 334223 11 TAGSVRGGDEVYLLCDK Unmodified 1838.8833 0.88326227 2042 Q00653 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 65.784 60.462 3 0.0026253 77737 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 52.784 42.191 52560000 0 52560000 0 0 0 0 0 0 0 0 0 0 0 0 0 50500 2042 45326 423508;423509 334232;334233 334232 2 TAGTICLETFK Unmodified 1239.6169 0.61692381 1014 P15170;Q8IYD1 GSPT1;GSPT2 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A;Eukaryotic peptide chain release factor GTP-binding subunit ERF3B yes no 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 67.339 67.506 2 0.027941 77818 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 67.113 53.118 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50501 1014 45327 423510;423511 334234;334235 334235 2 TAGYYPNPPLVLSSDETLISK Unmodified 2264.1576 0.15762944 2797 Q5TFE4 NT5DC1 5'-nucleotidase domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 5.12 3.79 4 1 3 3 2 1 1 1 89.476 87.29 2;3 1.1618E-112 108103 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 153.36 149.63 1261000000 0 1245500000 5808100 0 0 0 0 0 0 2035200 2082700 0 0 0 5531300 50502 2797 45328 423512;423513;423514;423515;423516;423517;423518;423519 334236;334237;334238;334239;334240;334241;334242;334243 334240 8 TAHEISLK Unmodified 897.49198 0.4919813 488 O75376 NCOR1 Nuclear receptor corepressor 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 18.884 19.046 2 0.033369 18640 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.753 35.35 10621000 0 0 0 0 2315900 0 2315800 0 0 0 0 0 1892500 0 4096800 50503 488 45329 423520;423521;423522;423523 334244 334244 1 TAHLDEEVNK Unmodified 1154.5568 0.5567664 953 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 7.96 3.45 6 1 20 2 3 2 2 1 2 2 2 2 2 1 2 1 1 2 16.806 15.982 2;3 1.1889E-05 23152 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 133.83 98.564 1515800000 83582000 1063300000 37646000 24181000 10388000 50600000 25849000 23344000 37062000 29412000 8887400 56521000 8514600 13259000 43281000 50504 953 45330 423524;423525;423526;423527;423528;423529;423530;423531;423532;423533;423534;423535;423536;423537;423538;423539;423540;423541;423542;423543;423544;423545;423546;423547;423548;423549;423550 334245;334246;334247;334248;334249;334250;334251;334252;334253;334254;334255;334256;334257;334258;334259;334260;334261;334262;334263 334256 16 TAHLDEEVNKGDILVVATGQPEMVK Oxidation (M) 2708.3691 0.36909555 953 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 0 1 1 By MS/MS 2 0 1 1 79.622 71.492 4 7.178E-09 93924 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.899 64.884 21378000 21378000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50505 953 45331 423551 334264 334264 1229 1 TAHNSEADLEESFNEHELEPSSPK Unmodified 2696.1838 0.1837972 3244 Q8IWS0 PHF6 PHD finger protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 5.43 3.96 4 3 1 1 2 1 1 1 66.616 63.667 3;4 5.3802E-69 79160 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 123.32 121.62 80735000 15450000 10378000 35927000 0 0 0 2246200 0 0 0 0 0 0 3903500 12830000 50506 3244 45332 423552;423553;423554;423555;423556;423557;423558 334265;334266;334267;334268;334269 334268 5 TAIEDSIQTSK Unmodified 1191.5983 0.59829686 2745 Q5K651 SAMD9 Sterile alpha motif domain-containing protein 9 yes yes 0 0 0 By MS/MS 2 0 1 1 37.49 32.575 2 0.0051087 42496 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.282 53.138 20003000 0 20003000 0 0 0 0 0 0 0 0 0 0 0 0 0 50507 2745 45333 423559 334270 334270 1 TAIGNTLVQDICYSPDTQK Unmodified 2123.0205 0.020484031 1259 P30039 PBLD Phenazine biosynthesis-like domain-containing protein yes yes 0 0 0 By MS/MS 2 0 1 1 83.111 78.391 2 7.5899E-31 97413 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.02 107.99 16506000 0 16506000 0 0 0 0 0 0 0 0 0 0 0 0 0 50508 1259 45334 423560 334271 334271 1 TAIHEVMEQGR Unmodified 1269.6136 0.61356977 1183 P25205 MCM3 DNA replication licensing factor MCM3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 2 2 1 2 2 2 2 2 2 29.924 30.252 2;3 0.00026237 32362 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 105.2 92.959 201910000 0 0 0 0 0 26649000 10967000 11287000 0 22338000 26045000 19621000 7466100 23690000 53848000 50509 1183 45335 423561;423562;423563;423564;423565;423566;423567;423568;423569;423570;423571;423572;423573;423574;423575;423576;423577;423578 334272;334273;334274;334275;334276;334277;334278;334279;334280;334281;334282;334283;334284;334285;334286 334278 11 TAIHEVMEQGR Oxidation (M) 1285.6085 0.60848439 1183 P25205 MCM3 DNA replication licensing factor MCM3 yes yes 0 1 0 By MS/MS 10 0 1 1 15.821 16.334 2 0.04448 15328 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.473 43.578 4569300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4569300 50510 1183 45335 423579 334287 334287 0 TAILVGGMSTQK Oxidation (M) 1220.6435 0.64347291 4302 Q9GZR7 DDX24 ATP-dependent RNA helicase DDX24 yes yes 0 1 0 By MS/MS 2 0 1 1 40.361 35.308 2 0.026688 45992 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 50.108 31.004 9402600 0 9402600 0 0 0 0 0 0 0 0 0 0 0 0 0 50511 4302 45336 423580 334288 334288 1 TAIQAAGYPDK Unmodified 1133.5717 0.57168818 991 P13929 ENO3 Beta-enolase yes yes 0 0 0 By MS/MS By MS/MS By matching 2.25 0.433 3 1 1 2 1 36.103 31.295 2 2.7951E-09 41172 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 141.95 111.7 456350000 20272000 434480000 1598800 0 0 0 0 0 0 0 0 0 0 0 0 50512 991 45337 423581;423582;423583;423584 334289;334290;334291;334292;334293 334291 5 TAIQTTEIK Unmodified 1003.555 0.55497548 1517 P46939 UTRN Utrophin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 15.272 15.421 2 0.045797 14731 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 43.124 6.0297 53985000 0 0 0 5736400 4167200 0 6297600 5040300 1463700 4542600 0 12481000 0 6997200 7259600 50513 1517 45338 423585;423586;423587;423588;423589;423590;423591;423592;423593 334294 334294 1 TAISLFEGK Unmodified 964.52295 0.52294707 4464 Q9H981 ACTR8 Actin-related protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 66.865 65.947 2 0.0078297 74957 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 71.379 49.833 65636000 19173000 0 5740700 3227200 2504800 3162600 0 3305500 3720100 4165700 4325400 6555400 4588000 0 5168400 50514 4464 45339 423594;423595;423596;423597;423598;423599;423600;423601;423602;423603;423604;423605 334295;334296;334297;334298;334299;334300 334299 6 TAITVEHLAIK Unmodified 1194.6972 0.69722304 4588 Q9NR30 DDX21 Nucleolar RNA helicase 2 yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 66.449 60.422 2 0.00064717 81339 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 99.688 72.434 26588000 21232000 0 5356300 0 0 0 0 0 0 0 0 0 0 0 0 50515 4588 45340 423606;423607 334301 334301 0 TALAATNPAVR Unmodified 1083.6037 0.60365701 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 34.941 35.127 2 0.00047862 37414 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.948 68.333 127750000 0 0 0 7504100 6864200 9306500 7787200 11100000 0 14978000 12487000 13775000 17061000 10380000 16508000 50516 2361 45341 423608;423609;423610;423611;423612;423613;423614;423615;423616;423617;423618 334302;334303;334304;334305;334306;334307;334308;334309;334310;334311;334312;334313 334305 9 TALALAIAQELGSK Unmodified 1384.7926 0.79257999 5086 Q9Y265 RUVBL1 RuvB-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.62 3.58 6 2 18 3 3 2 2 2 2 2 1 1 2 1 1 1 1 2 91.395 89.98 2;3 1.7461E-100 104316 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 201.46 128.81 2040100000 1340000000 450290000 40709000 3403000 10446000 13083000 10059000 10366000 8065000 37709000 17603000 14999000 6638200 14426000 62284000 50517 5086 45342 423619;423620;423621;423622;423623;423624;423625;423626;423627;423628;423629;423630;423631;423632;423633;423634;423635;423636;423637;423638;423639;423640;423641;423642;423643;423644 334314;334315;334316;334317;334318;334319;334320;334321;334322;334323;334324;334325;334326;334327;334328;334329;334330;334331;334332;334333;334334;334335;334336;334337;334338;334339;334340;334341 334317 26 TALALEVGDIVK Unmodified 1227.7075 0.70745338 1500 P46109 CRKL Crk-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.8 4 1 8 1 3 1 2 1 1 1 1 1 1 84.507 82.631 2 1.3186E-05 103935 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.38 68.505 2700200000 53396000 2545200000 42375000 0 0 6986600 0 0 3403400 4753500 7857100 8741800 0 7204200 20332000 50518 1500 45343 423645;423646;423647;423648;423649;423650;423651;423652;423653;423654;423655;423656;423657 334342;334343;334344;334345;334346;334347;334348;334349;334350;334351;334352;334353 334345 12 TALALEVGELVK Unmodified 1241.7231 0.72310344 1499 P46108 CRK Adapter molecule crk yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 89.897 85.226 2 0.00032311 104130 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 94.297 68.358 196740000 23384000 151410000 21948000 0 0 0 0 0 0 0 0 0 0 0 0 50519 1499 45344 423658;423659;423660;423661 334354;334355;334356;334357;334358;334359 334359 6 TALAQIFR Unmodified 918.5287 0.52870115 4204 Q9BW83 IFT27 Intraflagellar transport protein 27 homolog yes yes 0 0 0 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 71.495 71.728 2 0.0090204 81755 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.244 59.245 19084000 0 0 0 0 0 2227200 0 0 0 0 0 3535800 0 3397800 9923300 50520 4204 45345 423662;423663;423664;423665 334360 334360 1 TALDDRPQVLQPHR Unmodified 1644.8696 0.86960153 4997 Q9ULJ3 ZBTB21 Zinc finger and BTB domain-containing protein 21 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 1 2 2 1 1 2 1 2 2 2 2 42.29 42.527 3;4 0.00042231 47366 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 69.03 60.853 319150000 0 0 0 8339400 12245000 29222000 23882000 12700000 12322000 31371000 15069000 41160000 40997000 36319000 55524000 50521 4997 45346 423666;423667;423668;423669;423670;423671;423672;423673;423674;423675;423676;423677;423678;423679;423680;423681;423682;423683;423684 334361;334362;334363;334364;334365;334366;334367;334368;334369;334370;334371;334372;334373 334366 8 TALEEEIK Unmodified 931.48623 0.48622722 2321 Q13576 IQGAP2 Ras GTPase-activating-like protein IQGAP2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 41.509 35.616 2 0.032367 46257 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.255 42.3 67786000 4191000 63595000 0 0 0 0 0 0 0 0 0 0 0 0 0 50522 2321 45347 423685;423686 334374 334374 1 TALEEQLSR Unmodified 1045.5404 0.54038805 3639 Q92614 MYO18A Unconventional myosin-XVIIIa yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 37.408 37.482 2 0.012756 41678 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 60.828 38.304 39753000 0 0 0 5458700 2098400 0 4097000 4640600 3261400 5002100 6902400 0 4761600 3530600 0 50523 3639 45348 423687;423688;423689;423690;423691;423692;423693;423694;423695 334375;334376;334377;334378 334375 4 TALFEEISR Unmodified 1064.5502 0.55022446 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 67.061 67.362 2 0.039115 76543 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.704 30.497 50986000 0 0 0 0 0 0 0 0 0 10166000 8032900 11342000 9527600 0 11917000 50524 2431 45349 423696;423697;423698;423699;423700 334379 334379 1 TALIHDGLAR Unmodified 1065.5931 0.59309232 1188 P25398 RPS12 40S ribosomal protein S12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.637 37.818 2 0.003743 40730 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 75.378 49.641 345300000 0 0 0 13496000 17221000 15546000 13037000 7945200 9824500 27812000 36005000 45900000 57838000 38352000 62322000 50525 1188 45350 423701;423702;423703;423704;423705;423706;423707;423708;423709;423710;423711;423712 334380;334381;334382;334383;334384;334385;334386;334387;334388 334385 9 TALINSTGEEVAMR Oxidation (M) 1506.7348 0.73480712 757 P02545 LMNA Prelamin-A/C;Lamin-A/C yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 47.758 48.158 2 0.00028844 53924 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 70.488 59.965 22573000 0 0 0 0 0 9379400 0 0 0 0 0 13194000 0 0 0 50526 757 45351 423713;423714 334389;334390 334390 913 2 TALINSTGEEVAMRK Oxidation (M) 1634.8298 0.82977013 757 P02545 LMNA Prelamin-A/C;Lamin-A/C yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 1 1 2 2 2 2 2 2 3 2 2 2 40.909 41.153 2;3 2.1547E-05 45401 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 73.834 69.894 426790000 0 0 0 26736000 14340000 33061000 32684000 15594000 15816000 33630000 52681000 52663000 39612000 32538000 77436000 50527 757 45352 423715;423716;423717;423718;423719;423720;423721;423722;423723;423724;423725;423726;423727;423728;423729;423730;423731;423732;423733;423734;423735;423736;423737 334391;334392;334393;334394;334395;334396;334397;334398;334399;334400;334401;334402;334403;334404;334405;334406;334407;334408 334398 913 14 TALINSTGEEVAMRK Unmodified 1618.8349 0.83485551 757 P02545 LMNA Prelamin-A/C;Lamin-A/C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 1 2 1 1 1 1 2 2 1 1 2 48.967 49.22 2;3 5.8983E-84 54296 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 155.98 142.56 936670000 0 0 0 39992000 27213000 71596000 47843000 54584000 24041000 65263000 129490000 129220000 53556000 76959000 216920000 50528 757 45352 423738;423739;423740;423741;423742;423743;423744;423745;423746;423747;423748;423749;423750;423751;423752;423753 334409;334410;334411;334412;334413;334414;334415;334416;334417;334418;334419;334420;334421;334422;334423;334424;334425 334412 17 TALIYSDGLK Unmodified 1079.5863 0.58627561 1636 P50748 KNTC1 Kinetochore-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 59.431 58.494 2 0.0047747 66084 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 71.614 47.658 196960000 0 142050000 3371700 2285000 3075800 0 3105300 4199900 3170500 4412100 6514000 5656100 4418100 4886400 9810600 50529 1636 45353 423754;423755;423756;423757;423758;423759;423760;423761;423762;423763;423764;423765;423766;423767 334426;334427;334428;334429;334430;334431;334432;334433;334434 334433 9 TALLDISCVK Unmodified 1118.6005 0.60054547 403 O60488 ACSL4 Long-chain-fatty-acid--CoA ligase 4 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72.683 72.2 2 0.0045025 82870 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 72.607 61.538 287130000 0 191680000 2297300 4799600 4505100 6976800 4566500 7106000 8005300 7121400 8779800 16072000 8662500 6762100 9801200 50530 403 45354 423768;423769;423770;423771;423772;423773;423774;423775;423776;423777;423778;423779;423780;423781 334435;334436;334437;334438;334439;334440;334441;334442;334443;334444;334445;334446 334445 11 TALLDRKPEDVDTVQPK Unmodified 1924.0266 0.026555687 4642 Q9NUA8 ZBTB40 Zinc finger and BTB domain-containing protein 40 yes yes 0 0 2 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 1 2 2 2 2 1 2 2 2 2 2 47.267 47.5 3;4 0.00033162 52399 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.335 61.231 186550000 0 0 0 5095600 4908100 14110000 10291000 9653200 9697800 8878500 26326000 32855000 26164000 16024000 22551000 50531 4642 45355 423782;423783;423784;423785;423786;423787;423788;423789;423790;423791;423792;423793;423794;423795;423796;423797;423798;423799;423800;423801;423802 334447;334448;334449;334450;334451 334449 2 TALLPSDSVFAEER Unmodified 1533.7675 0.76748745 2456 Q14966 ZNF638 Zinc finger protein 638 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 78.118 78.236 2 8.0027E-09 89655 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 97.734 88.775 189790000 0 0 0 0 9973900 0 11741000 15236000 15947000 23414000 20243000 23670000 22421000 20182000 26964000 50532 2456 45356 423803;423804;423805;423806;423807;423808;423809;423810;423811;423812 334452;334453;334454;334455 334455 4 TALLPSDSVFAEERNLK Unmodified 1888.9894 0.9894419 2456 Q14966 ZNF638 Zinc finger protein 638 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 82.105 78.481 3 0.0013252 94789 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 57.52 53.477 33511000 0 20983000 12529000 0 0 0 0 0 0 0 0 0 0 0 0 50533 2456 45357 423813;423814 334456;334457 334457 1 TALNLFFK Unmodified 952.5382 0.53820321 1721 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 83.461 83.524 2 0.043141 96789 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 49.358 31.51 117850000 0 0 0 2733300 3588000 6294400 6589600 12053000 6758300 14660000 11171000 11873000 9948100 11464000 20721000 50534 1721 45358 423815;423816;423817;423818;423819;423820;423821;423822;423823;423824;423825;423826 334458 334458 1 TALNNTLDLSNVR Unmodified 1429.7525 0.75250609 2183 Q12768 KIAA0196 WASH complex subunit strumpellin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 68.402 68.361 2 0.00011582 78487 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 84.687 61.947 27990000 0 0 0 2349200 1790200 3084800 3345300 2373800 0 4358800 6029100 0 4658300 0 0 50535 2183 45359 423827;423828;423829;423830;423831;423832;423833;423834;423835;423836;423837 334459;334460;334461;334462;334463;334464;334465;334466;334467;334468;334469 334463 10 TALPAGPQPQPQPQPPLPSQPQAQK Unmodified 2600.3711 0.37108488 3123 Q7Z7F0 KIAA0907 UPF0469 protein KIAA0907 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.535 68.613 3 8.6019E-06 78126 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 40.682 36.954 147180000 0 0 0 10030000 8603900 9459700 11469000 9985400 9644400 19772000 11530000 13038000 10905000 13362000 19385000 50536 3123 45360 423838;423839;423840;423841;423842;423843;423844;423845;423846;423847;423848;423849 334470;334471;334472;334473;334474;334475;334476;334477;334478;334479;334480;334481 334475 12 TALPFNR Unmodified 817.44464 0.44463717 3573 Q8WWI1 LMO7 LIM domain only protein 7 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.872 46.041 2 0.048866 51493 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 64.776 39.778 234360000 0 0 0 15188000 15773000 21347000 19810000 18008000 19228000 22540000 18091000 24389000 19875000 14456000 25655000 50537 3573 45361 423850;423851;423852;423853;423854;423855;423856;423857;423858;423859;423860;423861 334482 334482 1 TALPTSGSSAGELELLAGEVPAR Unmodified 2225.1539 0.15394104 5284 Q9Y6I3 EPN1 Epsin-1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 87.705 87.835 2 4.7275E-05 101856 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 45.864 40.88 4301000 0 0 0 0 0 0 0 0 0 1867700 0 0 0 0 2433300 50538 5284 45362 423862;423863 334483;334484 334483 2 TALQEEIK Unmodified 930.50221 0.50221163 1518;3166 P46940;Q86VI3 IQGAP1;IQGAP3 Ras GTPase-activating-like protein IQGAP1;Ras GTPase-activating-like protein IQGAP3 no no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.36 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 42.88 43.132 2 0.0065388 36040 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 100.02 39.54 2297000000 3464900 80033000 0 213680000 134690000 253690000 150940000 150000000 117780000 225970000 192840000 236330000 152870000 115780000 268940000 50539 1518;3166 45363 423864;423865;423866;423867;423868;423869;423870;423871;423872;423873;423874;423875;423876;423877;423878 334485;334486;334487;334488;334489;334490;334491;334492;334493;334494;334495;334496;334497;334498 334485 10 TALRHPPFSPPEPPLSSPASQHK Unmodified 2477.2815 0.28154159 2854 Q68CZ2 TNS3 Tensin-3 yes yes 0 0 1 By MS/MS By matching By MS/MS 10 0 4 1 1 2 62.281 62.608 4 0.0063455 71702 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 25.827 18.715 29715000 0 0 0 0 0 5848900 0 0 3757000 0 0 0 0 0 20109000 50540 2854 45364 423879;423880;423881;423882 334499;334500 334499 1 TALSEEEEEEREFRK Unmodified 1880.8752 0.8752 4641 Q9NU22 MDN1 Midasin yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 1 1 2 1 2 1 2 2 2 1 40.052 40.289 3;4 0.0017093 44939 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 50.102 39.763 206750000 0 0 0 4604000 7554900 9801800 0 20013000 7395300 25320000 13788000 41151000 22394000 33443000 21289000 50541 4641 45365 423883;423884;423885;423886;423887;423888;423889;423890;423891;423892;423893;423894;423895;423896;423897;423898 334501;334502;334503;334504;334505;334506;334507;334508 334501 7 TALTTTISSR Unmodified 1049.5717 0.57168818 4172 Q9BV20 MRI1 Methylthioribose-1-phosphate isomerase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 36.806 36.934 2 0.0045797 39278 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.325 44.218 131720000 0 0 0 4216300 3770900 7232000 6558400 4171900 3699100 0 29312000 0 7600100 15434000 49727000 50542 4172 45366 423899;423900;423901;423902;423903;423904;423905;423906;423907;423908 334509 334509 1 TALVANTSNMPVAAR Oxidation (M) 1530.7824 0.78242601 1398 P38606 ATP6V1A V-type proton ATPase catalytic subunit A yes yes 0 1 0 By MS/MS 10 0 1 1 39.819 40.571 2 8.9157E-10 44696 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 91.855 77.181 5030000 0 0 0 0 0 0 0 0 0 0 0 5030000 0 0 0 50543 1398 45367 423909 334510 334510 2165 1 TALYSRIGTAEVEK Unmodified 1536.8148 0.814772 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 0 1 By MS/MS 2 0 1 1 59.396 51.17 3 0.0061951 69365 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.168 39.655 39894000 39894000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50544 645 45368 423910 334511;334512 334512 2 TAMEVEAPSK Oxidation (M) 1077.5012 0.50122535 113 E9PRG8 C11orf98 Uncharacterized protein C11orf98 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 15.259 15.497 2 0.0030261 15164 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 72.275 54.013 48471000 0 0 0 0 0 2438200 3212300 2779000 2611800 4471900 5680200 8217400 7697400 6134900 5227600 50545 113 45369 423911;423912;423913;423914;423915;423916;423917;423918;423919;423920 334513;334514;334515;334516;334517;334518 334517 148 6 TAMNVNDLFLAIAK Oxidation (M) 1535.8018 0.80176447 1829 P61020 RAB5B Ras-related protein Rab-5B yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 88.935 89.006 2 6.0801E-20 103093 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 138.99 121.97 146590000 0 0 0 1610700 5919100 9366600 7991100 10558000 8493700 21836000 21014000 17274000 7384200 11352000 23790000 50546 1829 45370 423921;423922;423923;423924;423925;423926;423927;423928;423929;423930;423931;423932 334519;334520;334521;334522;334523;334524;334525;334526;334527;334528 334522 2971 7 TAMNVNDLFLAIAK Unmodified 1519.8068 0.80684985 1829 P61020 RAB5B Ras-related protein Rab-5B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 94.827 94.981 2 0.030372 110230 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.589 33.9 10499000 0 0 0 0 0 0 0 1080900 0 2699300 1564200 0 0 837560 4317200 50547 1829 45370 423933;423934;423935;423936;423937 334529 334529 1 TAMNVNEIFMAIAK Oxidation (M) 1567.7738 0.77383516 1646 P51148 RAB5C Ras-related protein Rab-5C yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.43 2.06 1 13 1 1 2 1 1 1 2 2 1 1 1 92.023 91.545 2 2.4385E-29 115451 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 134.75 120.84 78498000 25652000 0 0 0 1117600 3772600 822420 2100400 1668200 13245000 12719000 4444100 0 2298300 10658000 50548 1646 45371 423938;423939;423940;423941;423942;423943;423944;423945;423946;423947;423948;423949;423950;423951 334530;334531;334532;334533;334534;334535 334532 2656;2657 6 TAMNVNEIFMAIAK Unmodified 1551.7789 0.77892054 1646 P51148 RAB5C Ras-related protein Rab-5C yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 94.781 94.951 2 0.0046425 110210 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.37 43.398 4073100 0 0 0 0 0 0 0 0 0 0 718430 0 0 0 3354700 50549 1646 45371 423952;423953 334536 334536 1 TAMNVNEIFMAIAK 2 Oxidation (M) 1583.7687 0.76874978 1646 P51148 RAB5C Ras-related protein Rab-5C yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 84.987 85.129 2 3.0643E-43 98670 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 159.83 21.61 198390000 0 0 0 0 0 0 0 61166000 44541000 0 0 0 45894000 46786000 0 50550 1646 45371 423954;423955;423956;423957 334537;334538;334539;334540 334538 2656;2657 3 TAMPSPGVSQNK Unmodified 1215.5918 0.59177169 3155 Q86UU0 BCL9L B-cell CLL/lymphoma 9-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 29 28.576 2 2.9143E-05 30021 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.048 76.585 89707000 0 13125000 0 0 0 6372100 9272200 0 8021900 12015000 16348000 0 0 0 24552000 50551 3155 45372 423958;423959;423960;423961;423962;423963;423964;423965 334541;334542;334543;334544;334545;334546;334547;334548;334549;334550 334547 8 TAMPSPGVSQNK Oxidation (M) 1231.5867 0.58668632 3155 Q86UU0 BCL9L B-cell CLL/lymphoma 9-like protein yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 13.814 13.976 2 0.003934 12950 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.549 35.036 30840000 0 0 0 2448500 2970400 2174900 0 2822000 0 3607800 4207300 4997200 0 0 7611600 50552 3155 45372 423966;423967;423968;423969;423970;423971;423972;423973 334551;334552;334553 334551 4774 3 TAMSTPHVAEPAENEQDEQDENGAEASADLR Oxidation (M) 3327.407 0.40695021 1198 P26038 MSN Moesin yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 48.109 48.456 3 8.3701E-84 53701 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 114.79 112.68 38111000 0 0 0 0 3424800 0 0 0 0 0 7347100 9937100 0 0 17402000 50553 1198 45373 423974;423975;423976;423977 334554;334555;334556;334557 334554 1740 4 TAMSTPHVAEPAENEQDEQDENGAEASADLR Unmodified 3311.412 0.41203559 1198 P26038 MSN Moesin yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 55.139 55.597 3 2.9016E-61 62287 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 99.446 97.223 36169000 0 0 0 0 0 0 0 0 0 0 7389100 6594600 0 3750000 18436000 50554 1198 45373 423978;423979;423980;423981 334558;334559;334560 334558 3 TAMSTPHVAEPAENEQDEQDENGAEASADLRADAMAK 2 Oxidation (M) 3930.6756 0.67559686 1198 P26038 MSN Moesin yes yes 0 2 1 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 2 1 2 56.291 50.857 4 3.8102E-85 64806 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 112.65 111.31 158750000 63072000 28174000 67502000 0 0 0 0 0 0 0 0 0 0 0 0 50555 1198 45374 423982;423983;423984;423985;423986 334561;334562;334563;334564;334565 334565 1740;1741 5 TAMSTPHVAEPAENEQDEQDENGAEASADLRADAMAK Oxidation (M) 3914.6807 0.68068223 1198 P26038 MSN Moesin yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 62.814 56.833 4 8.5476E-133 75196 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 134.63 134.51 192320000 101060000 36744000 54516000 0 0 0 0 0 0 0 0 0 0 0 0 50556 1198 45374 423987;423988;423989 334566;334567;334568 334567 1740;1741 3 TAMSTPHVAEPAENEQDEQDENGAEASADLRADAMAK Unmodified 3898.6858 0.68576761 1198 P26038 MSN Moesin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 68.099 62.12 4 1.2738E-133 80100 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 139.6 137.9 117980000 43965000 35219000 38793000 0 0 0 0 0 0 0 0 0 0 0 0 50557 1198 45374 423990;423991;423992 334569;334570;334571;334572 334570 4 TAMVELINK Unmodified 1017.5529 0.55286699 2443 Q14746 COG2 Conserved oligomeric Golgi complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 63.367 58.527 2 0.01606 75274 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.438 58.307 57960000 0 55247000 2713100 0 0 0 0 0 0 0 0 0 0 0 0 50558 2443 45375 423993;423994 334573;334574 334573 2 TANDMIHAENMR Unmodified 1401.6129 0.61291784 1198 P26038 MSN Moesin yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.59 3.05 3 14 1 1 1 1 1 1 1 1 1 2 1 1 2 2 35.377 34.727 2;3 1.6628E-08 37020 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 116.01 112.15 485060000 10055000 100100000 27073000 0 2735200 10175000 3885700 4112200 2445100 8714700 69051000 32000000 5482900 29945000 179280000 50559 1198 45376 423995;423996;423997;423998;423999;424000;424001;424002;424003;424004;424005;424006;424007;424008;424009;424010;424011 334575;334576;334577;334578;334579;334580;334581;334582;334583 334578 8 TANDMIHAENMR Oxidation (M) 1417.6078 0.60783246 1198 P26038 MSN Moesin yes yes 0 1 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 21.564 20.949 3 0.0026365 20465 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.915 42.599 82263000 0 36879000 0 4287300 2257000 0 2404800 0 0 0 0 0 0 10034000 26401000 50560 1198 45376 424012;424013;424014;424015;424016;424017;424018 334584;334585;334586 334585 1742 3 TANEEEEIVHK Unmodified 1297.615 0.61500956 2877 Q6GMV2 SMYD5 SET and MYND domain-containing protein 5 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 4 2 2 4 26.863 22.254 2;3 1.6066E-09 29538 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.4 112.72 261000000 28489000 232510000 0 0 0 0 0 0 0 0 0 0 0 0 0 50561 2877 45377 424019;424020;424021;424022;424023;424024 334587;334588;334589;334590;334591;334592 334588 6 TANEGGSLLYEQLGYK Unmodified 1741.8523 0.85227972 3956 Q96QD8 SLC38A2 Sodium-coupled neutral amino acid transporter 2 yes yes 0 0 0 By MS/MS 2 0 1 1 80.166 75.454 2 4.4725E-40 93952 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 172.76 157.22 59614000 0 59614000 0 0 0 0 0 0 0 0 0 0 0 0 0 50562 3956 45378 424025 334593 334593 1 TANFVAVDTELSGLGDRK Unmodified 1891.964 0.96395543 3857 Q96GM8 TOE1 Target of EGR1 protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.9 3.81 3 1 6 1 2 1 1 1 1 1 1 1 79.379 77.595 3 1.31E-10 97594 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.84 95.307 123600000 15627000 51585000 10577000 0 0 6003600 0 0 3230200 6262500 0 8316800 0 6694100 15300000 50563 3857 45379 424026;424027;424028;424029;424030;424031;424032;424033;424034;424035 334594;334595;334596;334597;334598;334599;334600;334601 334596 8 TANGTAEAVQIQFGLINCGNK Acetyl (Protein N-term) 2247.0954 0.095380308 2626 Q16658 FSCN1 Fascin yes yes 1 0 0 By MS/MS 2 0 1 1 93.124 84.994 3 6.6262E-09 110159 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.021 65.718 9651400 9651400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50564 2626 45380 424036 334602 334602 1 TANLAEANASEEDK Unmodified 1461.6583 0.65833093 3111 Q7Z6E9 RBBP6 E3 ubiquitin-protein ligase RBBP6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 24.052 24.214 2 2.8659E-05 25773 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 86.313 77.205 77773000 0 0 0 5091300 3175200 6439700 6309800 6796500 5222500 6833700 12195000 0 8268100 7356300 10085000 50565 3111 45381 424037;424038;424039;424040;424041;424042;424043;424044;424045;424046;424047 334603;334604;334605;334606;334607;334608;334609;334610;334611;334612 334611 10 TANLNLETR Unmodified 1030.5407 0.5407224 4963 Q9UKF6 CPSF3 Cleavage and polyadenylation specificity factor subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.666 35.848 2 0.0047785 38194 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.731 59.994 188910000 0 0 0 12603000 10344000 14912000 9584200 11583000 10374000 18454000 18889000 18660000 19858000 15422000 28228000 50566 4963 45382 424048;424049;424050;424051;424052;424053;424054;424055;424056;424057;424058;424059 334613;334614;334615;334616;334617;334618;334619;334620;334621;334622 334615 8 TANLTGHAEKVGIENFELLKVLGTGAYGK Unmodified 3029.6186 0.61858538 520 O75582 RPS6KA5 Ribosomal protein S6 kinase alpha-5 yes yes 0 0 2 By MS/MS 1 0 1 1 111.47 112.36 5 0.020772 105397 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 16.141 5.8119 30274000 0 30274000 0 0 0 0 0 0 0 0 0 0 0 0 0 50567 520 45383 424060 334623 334623 1 TANQASDTFSGIGK Unmodified 1395.663 0.66302238 2589 Q15847 ADIRF Adipogenesis regulatory factor yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 8.64 2.9 1 1 9 2 1 1 1 1 1 1 1 1 1 42.976 42.186 2 0.00021397 46441 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.871 70.783 278700000 0 180590000 0 4417900 6091700 0 7933500 6972800 0 6865900 15389000 14593000 0 10068000 25771000 50568 2589 45384 424061;424062;424063;424064;424065;424066;424067;424068;424069;424070;424071 334624;334625;334626;334627 334625 4 TANQLMNDFAEK Unmodified 1380.6344 0.63436479 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.89 3.9 7 11 1 3 3 1 1 1 1 1 1 1 1 1 1 1 63.309 61.845 2 8.2393E-06 70465 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 129.82 116.23 669470000 9581100 331480000 11313000 15295000 17150000 27060000 17178000 18594000 0 33015000 29863000 37232000 29452000 35583000 56674000 50569 3676 45385 424072;424073;424074;424075;424076;424077;424078;424079;424080;424081;424082;424083;424084;424085;424086;424087;424088;424089 334628;334629;334630;334631;334632;334633;334634;334635;334636;334637;334638;334639;334640;334641 334638 12 TANQLMNDFAEK Oxidation (M) 1396.6293 0.62927941 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 1 0 By MS/MS By matching By matching By matching By MS/MS 6.71 3.81 2 1 4 3 1 1 1 1 43.903 42.27 2 0.0024994 46470 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.418 47.211 155820000 0 104250000 0 8150800 0 0 10208000 0 0 0 0 0 15343000 0 17861000 50570 3676 45385 424090;424091;424092;424093;424094;424095;424096 334642;334643;334644;334645 334644 5219 4 TANVPQTVPMR Unmodified 1212.6285 0.62849155 1516 P46937 YAP1 Transcriptional coactivator YAP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 43.57 44.22 2 0.00030193 48480 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.309 73.609 68063000 0 0 0 0 0 0 0 0 0 0 17817000 21266000 0 0 28979000 50571 1516 45386 424097;424098;424099 334646;334647;334648 334647 3 TANVPQTVPMR Oxidation (M) 1228.6234 0.62340617 1516 P46937 YAP1 Transcriptional coactivator YAP1 yes yes 0 1 0 By MS/MS By matching By matching 10 0 3 1 1 1 32.786 33.37 2 0.012489 36077 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 43.308 24.214 37396000 0 0 0 0 0 0 0 0 0 0 0 12815000 0 9444100 15136000 50572 1516 45386 424100;424101;424102 334649 334649 2396 1 TAPAANLASR Unmodified 970.51959 0.51959303 5066 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 2 1 1 1 1 1 1 22.545 22.746 2 0.0064586 23838 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 64.841 46.065 398620000 0 0 0 18562000 17790000 2400500 21515000 24157000 22965000 36349000 44934000 72799000 42408000 49696000 45042000 50573 5066 45387 424103;424104;424105;424106;424107;424108;424109;424110;424111;424112;424113;424114;424115 334650;334651;334652;334653;334654;334655;334656;334657 334650 6 TAPAAPAEDAVAAAAAAPSEPSEPSRPSPQPK Unmodified 3038.4945 0.49450708 2701 Q53GA4 PHLDA2 Pleckstrin homology-like domain family A member 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 21 2 2 2 2 2 2 2 2 2 1 1 1 65.323 65.38 3;4 4.3403E-30 74764 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 67.283 58.549 246730000 0 0 0 18499000 18485000 24613000 21683000 22527000 15817000 17526000 30697000 45266000 7425700 12508000 11683000 50574 2701 45388 424116;424117;424118;424119;424120;424121;424122;424123;424124;424125;424126;424127;424128;424129;424130;424131;424132;424133;424134;424135;424136 334658;334659;334660;334661;334662;334663;334664;334665;334666;334667;334668;334669;334670;334671;334672;334673 334667 16 TAPARVPTLAVPAISLPDDVR Unmodified 2158.211 0.21100241 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 0 1 By MS/MS 10 0 1 1 86.825 86.984 3 0.0099456 100576 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 26.84 23.399 4227100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4227100 50575 1201 45389 424137 334674 334674 1 TAPPALPTGYDSEEEEESRPMSYDEK Unmodified 2927.2655 0.26547792 1189 P25440 BRD2 Bromodomain-containing protein 2 yes yes 0 0 1 By MS/MS 2 0 1 1 71.345 65.528 3 0.018162 83381 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 23.864 21.357 9477700 0 9477700 0 0 0 0 0 0 0 0 0 0 0 0 0 50576 1189 45391 424138 334675 334675 1 TAPPASPEAR Unmodified 995.50361 0.50360861 3897 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 15.125 15.297 2 0.023694 14370 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 45.368 29.214 104660000 0 0 0 6035900 4583300 5813500 6877100 5276100 0 9520300 14550000 11610000 12713000 11898000 15782000 50577 3897 45392 424139;424140;424141;424142;424143;424144;424145;424146;424147;424148;424149 334676 334676 1 TAPPGSAVGK Unmodified 883.47633 0.47633123 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.364 12.513 2 0.0099821 11087 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 56.81 35.039 117670000 0 0 0 6721600 8109200 9581700 10479000 8253200 9259500 11822000 10077000 13523000 11969000 9415700 8457400 50578 4139 45393 424150;424151;424152;424153;424154;424155;424156;424157;424158;424159;424160;424161 334677;334678;334679;334680;334681 334679 5 TAPPVTNNSEIQASEVLVAADK Unmodified 2253.1489 0.14885567 3999 Q96T58 SPEN Msx2-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 78.449 78.507 3 0.0052242 90609 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 27.52 19.298 12904000 0 0 0 0 2114200 0 3085800 4601200 3102700 0 0 0 0 0 0 50579 3999 45394 424162;424163;424164;424165 334682;334683;334684 334682 3 TAPQCLLR Unmodified 957.50659 0.5065855 4443 Q9H832 UBE2Z Ubiquitin-conjugating enzyme E2 Z yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 41.328 41.568 2 0.013136 44888 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.039 55.003 82494000 0 0 0 4992500 0 11914000 9090300 0 9412600 0 14694000 15770000 0 0 16621000 50580 4443 45395 424166;424167;424168;424169;424170;424171;424172 334685;334686 334686 2 TAPSSSCTAVASAASRPDSTHMVEAR Unmodified 2646.2126 0.21261169 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 2 1 1 1 1 1 43.792 43.907 3;4 1.1652E-33 49067 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 93.397 86.144 148820000 0 0 0 11374000 10876000 12423000 14521000 16555000 12370000 15993000 0 26623000 0 0 28082000 50581 4139 45396 424173;424174;424175;424176;424177;424178;424179;424180;424181;424182 334687;334688;334689;334690;334691;334692;334693;334694;334695;334696;334697 334689 11 TAPTLSPEHWK Unmodified 1265.6404 0.64043645 3897 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 48.78 47.595 3 0.015928 60942 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 60.49 49.277 275480000 91986000 40968000 25240000 0 6751200 11382000 0 8168300 7719000 12637000 13902000 16913000 13972000 9457100 16383000 50582 3897 45397 424183;424184;424185;424186;424187;424188;424189;424190;424191;424192;424193;424194;424195 334698;334699;334700 334699 2 TAPTSTIAPGVVMASSPALPTQPAEEAARK Unmodified 2948.5277 0.52772146 1034 P16220 CREB1 Cyclic AMP-responsive element-binding protein 1 yes yes 0 0 1 By MS/MS 10 0 1 1 79.253 79.499 3 1.4157E-15 91461 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.757 40.147 21609000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21609000 50583 1034 45398 424196 334701 334701 1 TAPVASTPSSTPIPALSPPTK Unmodified 2019.0888 0.088821592 3084 Q7Z3K3 POGZ Pogo transposable element with ZNF domain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.366 76.413 2 0.00018443 87418 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 55.213 44.267 53785000 0 0 0 3293200 3508200 4834400 5543500 3611100 0 5256600 6605300 5752600 5316900 3996900 6066200 50584 3084 45399 424197;424198;424199;424200;424201;424202;424203;424204;424205;424206;424207 334702;334703;334704;334705;334706;334707;334708;334709 334706 8 TAPVQAPPAPVIVTETPEPAMTSGVYRPPGAR Unmodified 3256.6914 0.69143274 4980 Q9UKY7 CDV3 Protein CDV3 homolog yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 2 2 1 2 82.635 82.808 3;4 2.1147E-20 95470 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.566 45.965 119290000 0 0 0 0 0 0 0 1426900 0 0 15744000 19347000 0 4587300 78189000 50585 4980 45400 424208;424209;424210;424211;424212;424213;424214;424215 334710;334711;334712 334710 3 TAPVQAPPAPVIVTETPEPAMTSGVYRPPGAR Oxidation (M) 3272.6863 0.68634737 4980 Q9UKY7 CDV3 Protein CDV3 homolog yes yes 0 1 1 By matching By MS/MS 10 0 2 1 1 79.096 79.155 4 8.7838E-16 90690 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 48.449 42.608 19423000 0 0 0 0 0 3291000 0 0 0 0 0 0 0 16132000 0 50586 4980 45400 424216;424217 334713 334713 6329 1 TAPYVVTGSVDQTVK Unmodified 1563.8144 0.81443765 1471 P43034 PAFAH1B1 Platelet-activating factor acetylhydrolase IB subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.25 4.04 2 4 1 5 2 4 1 1 1 1 2 68.141 66.462 2;3 1.5588E-41 75815 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 200.76 182.49 861390000 63647000 699670000 2451500 0 0 0 0 0 0 0 13544000 16617000 0 13438000 52022000 50587 1471 45401 424218;424219;424220;424221;424222;424223;424224;424225;424226;424227;424228;424229 334714;334715;334716;334717;334718;334719;334720;334721;334722;334723;334724;334725 334722 9 TAQAAASGTTLLPQFR Unmodified 1631.8631 0.86311917 2649 Q2KHR3 QSER1 Glutamine and serine-rich protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.95 76.012 2 3.8081E-20 87775 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 111.12 96.247 69546000 0 0 0 3059500 3855000 4915300 4929500 6018300 2985800 7011500 7259100 7937900 5367600 5366800 10840000 50588 2649 45402 424230;424231;424232;424233;424234;424235;424236;424237;424238;424239;424240;424241 334726;334727;334728;334729;334730;334731;334732;334733;334734;334735;334736;334737 334731 12 TAQALSSGSGSQETK Unmodified 1450.69 0.68996541 684 O95747 OXSR1 Serine/threonine-protein kinase OSR1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12.221 11.822 2 1.3441E-268 11271 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 250.26 240.61 223280000 13711000 8230500 0 11459000 9066200 26110000 16816000 9292600 8087600 22189000 11776000 22058000 21444000 19235000 23801000 50589 684 45403 424242;424243;424244;424245;424246;424247;424248;424249;424250;424251;424252;424253;424254;424255 334738;334739;334740;334741;334742;334743;334744;334745;334746;334747;334748;334749;334750;334751;334752;334753;334754 334750 17 TAQDLSSPR Unmodified 973.48287 0.48287317 4902 Q9UHI6 DDX20 Probable ATP-dependent RNA helicase DDX20 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 2 14.297 14.459 2 0.0039747 13979 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 112.84 53.637 30252000 0 0 0 0 0 0 5794600 0 5120100 0 0 0 0 19337000 0 50590 4902 45404 424256;424257;424258;424259;424260;424261 334755;334756;334757;334758 334755 4 TAQEAFESVVEYFGENPK Unmodified 2043.9426 0.94255129 664 O95466 FMNL1 Formin-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 96.614 91.227 3 3.3759E-05 114488 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 61.102 56.716 22266000 10702000 11564000 0 0 0 0 0 0 0 0 0 0 0 0 0 50591 664 45405 424262;424263;424264 334759;334760 334759 2 TAQEVETYR Unmodified 1095.5197 0.51965261 1062 P17844 DDX5 Probable ATP-dependent RNA helicase DDX5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 20.858 21.028 2 0.0052721 20627 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 78.264 61.321 32839000 0 0 0 0 3461200 3070500 0 4627400 2508500 3714300 6383700 0 5176500 3896600 0 50592 1062 45406 424265;424266;424267;424268;424269;424270;424271;424272;424273;424274;424275 334761;334762;334763;334764;334765;334766;334767;334768;334769;334770;334771 334768 11 TAQEVETYRR Unmodified 1251.6208 0.62076364 1062 P17844 DDX5 Probable ATP-dependent RNA helicase DDX5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 25 2 2 2 2 2 2 2 2 2 2 2 3 15.448 15.629 2;3 0.00039167 15311 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 108.67 90.332 1090100000 0 0 0 43359000 43074000 46958000 63486000 48728000 42780000 85797000 99151000 167220000 114570000 123550000 211380000 50593 1062 45407 424276;424277;424278;424279;424280;424281;424282;424283;424284;424285;424286;424287;424288;424289;424290;424291;424292;424293;424294;424295;424296;424297;424298;424299;424300 334772;334773;334774;334775;334776;334777;334778;334779;334780;334781;334782;334783;334784;334785;334786;334787;334788;334789;334790 334780 16 TAQGLSPVDQR Unmodified 1170.5993 0.59929991 5052 Q9UPN9 TRIM33 E3 ubiquitin-protein ligase TRIM33 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.46 28.655 2 0.0020981 30987 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 69.276 36.013 100120000 0 0 0 5046300 5299000 7713600 6727300 5987100 4771700 10545000 10521000 8972100 8988400 11038000 14509000 50594 5052 45408 424301;424302;424303;424304;424305;424306;424307;424308;424309;424310;424311;424312 334791;334792;334793;334794;334795;334796;334797 334796 7 TAQGLSPVDQRK Unmodified 1298.6943 0.69426293 5052 Q9UPN9 TRIM33 E3 ubiquitin-protein ligase TRIM33 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.67 3.89 4 1 4 2 2 1 1 1 1 1 22.049 19.834 2;3 0.0057226 25203 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 45.28 34.354 147610000 37347000 22975000 29743000 0 0 11317000 0 0 0 15449000 0 0 13256000 0 17528000 50595 5052 45409 424313;424314;424315;424316;424317;424318;424319;424320;424321 334798;334799;334800;334801;334802;334803 334803 5 TAQGSLSLK Unmodified 903.50255 0.50254598 279 O15372 EIF3H Eukaryotic translation initiation factor 3 subunit H yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 28.017 27.055 2 0.0051747 29095 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 81.296 33.448 1438700000 51211000 1059800000 9021900 15569000 14977000 26442000 18984000 21005000 13689000 28310000 32722000 30963000 27514000 33472000 55085000 50596 279 45410 424322;424323;424324;424325;424326;424327;424328;424329;424330;424331;424332;424333;424334;424335;424336;424337 334804;334805;334806;334807;334808;334809;334810;334811;334812;334813;334814;334815;334816;334817;334818;334819;334820;334821;334822;334823;334824;334825;334826 334805 23 TAQNHPMLVELK Oxidation (M) 1395.718 0.71803484 5214 Q9Y4Z0 LSM4 U6 snRNA-associated Sm-like protein LSm4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6 4 5 5 1 2 2 1 1 1 1 1 45.31 42.763 2;3 0.00019445 54536 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 90.793 70.589 558750000 30420000 257000000 178240000 0 0 0 0 0 15585000 18722000 0 29110000 16330000 13344000 0 50597 5214 45411 424338;424339;424340;424341;424342;424343;424344;424345;424346;424347 334827;334828;334829;334830;334831;334832;334833;334834;334835 334831 6616 8 TAQNHPMLVELK Unmodified 1379.7231 0.72312022 5214 Q9Y4Z0 LSM4 U6 snRNA-associated Sm-like protein LSm4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 5.64 3.98 6 5 2 2 2 1 1 1 1 1 56.384 53.051 2;3 5.3457E-07 74943 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 120.86 62.997 658400000 380600000 151420000 72391000 8676700 6387000 0 7069200 0 12204000 0 0 0 0 19649000 0 50598 5214 45411 424348;424349;424350;424351;424352;424353;424354;424355;424356;424357;424358 334836;334837;334838;334839;334840;334841;334842;334843 334839 8 TAQNLSIFLGSFR Unmodified 1452.7725 0.77251325 417 O60610 DIAPH1 Protein diaphanous homolog 1 yes yes 0 0 0 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 90.145 90.288 2 0.0027457 104649 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.164 38.186 7282100 0 0 0 0 0 1838600 0 1082000 1019600 0 0 0 0 0 3341900 50599 417 45412 424359;424360;424361;424362 334844 334844 1 TAQQNGDTPEAQGLDITTYGESNLVAEPQK Unmodified 3174.4953 0.49529494 2467 Q15003 NCAPH Condensin complex subunit 2 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 79.181 79.182 3 7.3231E-29 91609 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 66.501 60.598 16955000 0 0 0 0 3499500 0 0 0 0 6872000 6583200 0 0 0 0 50600 2467 45413 424363;424364;424365 334845;334846 334845 2 TAQRADLQNHLDTAQNALQDK Unmodified 2350.1625 0.16254867 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 5 2 1 2 56.48 50.429 3;4 3.1812E-86 68345 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 153.82 146.84 103400000 80654000 0 22750000 0 0 0 0 0 0 0 0 0 0 0 0 50601 2495 45414 424366;424367;424368;424369;424370 334847;334848;334849;334850;334851 334848 5 TAQSSWVNLPR Unmodified 1257.6466 0.64658446 4992 Q9ULD2 MTUS1 Microtubule-associated tumor suppressor 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 52.545 52.683 3 0.041208 58553 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 25.437 13.904 6898200 0 0 0 0 0 0 3476700 0 0 0 0 0 0 3421500 0 50602 4992 45415 424371;424372 334852 334852 1 TAQTILEK Unmodified 902.5073 0.50729701 540 O75792 RNASEH2A Ribonuclease H2 subunit A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 26.215 26.373 2 0.01524 27821 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 69.198 37.243 57614000 0 0 0 4250500 3435700 7602200 6255400 4588300 0 5680900 6781200 0 5351800 4827900 8839700 50603 540 45416 424373;424374;424375;424376;424377;424378;424379;424380;424381;424382 334853;334854;334855;334856;334857 334855 5 TAREDLESVVK Unmodified 1245.6565 0.65648044 1204 P26374 CHML Rab proteins geranylgeranyltransferase component A 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 47.074 42.343 3 0.01179 55529 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 56.205 30.087 107840000 0 67861000 39978000 0 0 0 0 0 0 0 0 0 0 0 0 50604 1204 45417 424383;424384 334858 334858 1 TARNIMSMCFSK Oxidation (M) 1460.6574 0.65742519 3669 Q92833 JARID2 Protein Jumonji yes yes 0 1 1 By MS/MS By matching By matching 2 0 3 1 1 1 42.033 36.862 3 0.023187 51052 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.544 29.514 198810000 114150000 27856000 56803000 0 0 0 0 0 0 0 0 0 0 0 0 50605 3669 45418 424385;424386;424387 334859;334860 334859 2 TARPFGAPPPADSAPQQNGQPLRPLVPDASK Unmodified 3179.6476 0.64759409 4585 Q9NR12 PDLIM7 PDZ and LIM domain protein 7 yes yes 0 0 2 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 70.914 71.141 4 1.7883E-05 81216 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 30.914 28.446 28279000 0 0 0 0 0 0 2437400 0 0 6769300 4895100 0 0 4200800 9976900 50606 4585 45419 424388;424389;424390;424391;424392 334861;334862;334863 334862 3 TASALFAGFR Unmodified 1039.5451 0.5450795 3467 Q8NI36 WDR36 WD repeat-containing protein 36 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 75.306 75.496 2 0.0063801 87032 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 65.156 52.725 15466000 0 0 0 0 0 0 0 4067700 0 2392200 2756400 0 0 2200800 4049300 50607 3467 45420 424393;424394;424395;424396;424397 334864;334865;334866;334867 334866 4 TASAPNLAETEK Unmodified 1230.6092 0.6091959 3180 Q86W92 PPFIBP1 Liprin-beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 30.341 30.562 2 0.0022534 32834 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 63.624 56.404 21177000 0 0 0 2520600 0 0 2144100 0 1995500 0 4194000 6266800 0 4056300 0 50608 3180 45421 424398;424399;424400;424401;424402;424403;424404;424405 334868;334869;334870;334871 334870 4 TASAQEFAR Unmodified 979.47231 0.47230849 3527 Q8TF64 GIPC3 PDZ domain-containing protein GIPC3 yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 21.26 21.621 2 0.0036117 21391 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 102.51 63.551 45503000 0 0 0 0 0 0 0 5167400 0 7690300 10343000 0 0 8139300 14163000 50609 3527 45422 424406;424407;424408;424409;424410;424411 334872;334873 334873 2 TASDFITK Unmodified 881.44945 0.44944778 819 P06396 GSN Gelsolin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 32.102 31.526 2 0.01948 40119 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.833 54.897 + 246070000 0 54461000 0 22141000 19634000 14757000 15983000 12833000 14784000 16011000 17919000 25547000 0 13512000 18488000 50610 819 45423 424412;424413;424414;424415;424416;424417;424418;424419;424420;424421;424422;424423;424424 334874;334875 334874 1 TASDMVSTSR Oxidation (M) 1069.471 0.47098786 130 O00232 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 2 1 2 7.8061 7.9744 2 0.0036307 5930 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 68.657 55.62 153080000 0 0 0 6030700 0 9271200 0 5285200 3829500 18750000 38769000 47004000 7451900 5122100 11572000 50611 130 45424 424425;424426;424427;424428;424429;424430;424431;424432;424433;424434;424435;424436 334876;334877;334878;334879;334880;334881;334882;334883 334876 179 6 TASDMVSTSR Unmodified 1053.4761 0.47607323 130 O00232 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 17.434 17.623 2 0.00067415 16966 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 121.73 112.14 334170000 0 0 0 20792000 20673000 32973000 11664000 11073000 6389500 45223000 51552000 74549000 12874000 15306000 31104000 50612 130 45424 424437;424438;424439;424440;424441;424442;424443;424444;424445;424446;424447;424448 334884;334885;334886;334887;334888;334889;334890;334891;334892;334893;334894;334895;334896;334897 334890 14 TASDVVQPAAVQAQGQVNDENRRPQR Unmodified 2833.4179 0.41792851 4218 Q9BX40 LSM14B Protein LSM14 homolog B yes yes 0 0 2 By MS/MS By MS/MS 10 0 2 1 1 42.748 42.856 4 6.6892E-08 47968 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 41.084 29.663 35684000 0 0 0 0 0 19355000 0 16328000 0 0 0 0 0 0 0 50613 4218 45425 424449;424450 334898;334899 334899 2 TASEGDGGAAAGAAAAGAR Unmodified 1530.7023 0.70226143 5203 Q9Y4H2 IRS2 Insulin receptor substrate 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 22.174 22.341 2 2.6902E-38 22308 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 114.72 95.941 37594000 0 0 0 3570500 2029200 3037900 3825100 3891700 2570400 0 4099000 6438400 3907900 4223700 0 50614 5203 45426 424451;424452;424453;424454;424455;424456;424457;424458;424459;424460;424461 334900;334901;334902;334903;334904;334905;334906;334907;334908;334909 334906 10 TASEGDGGAAAGAAAAGARPVSVAGSPLSPGPVR Unmodified 2931.4799 0.47986006 5203 Q9Y4H2 IRS2 Insulin receptor substrate 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 68.586 68.763 3 1.9099E-43 78967 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.975 71.63 82902000 0 0 0 0 0 12832000 8549500 5432700 7338300 10798000 11703000 11568000 5404300 9276900 0 50615 5203 45427 424462;424463;424464;424465;424466;424467;424468;424469;424470 334910;334911;334912;334913;334914;334915;334916;334917;334918;334919;334920;334921 334921 12 TASEGDGGAAAGAAAAGARPVSVAGSPLSPGPVRAPLSR Unmodified 3455.7869 0.78694112 5203 Q9Y4H2 IRS2 Insulin receptor substrate 2 yes yes 0 0 2 By matching By matching By MS/MS 10 0 3 1 1 1 73.298 73.577 4 2.398E-25 84375 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.242 49.456 56421000 0 0 0 0 0 0 0 12304000 0 0 0 20150000 0 0 23968000 50616 5203 45428 424471;424472;424473 334922 334922 1 TASEPSAQLSYASTGR Unmodified 1624.7693 0.76927837 3733 Q96A65 EXOC4 Exocyst complex component 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 44.258 43.929 2 1.8396E-19 49190 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 108.37 101.48 13658000 0 0 0 3900900 4019800 0 5737300 0 0 0 0 0 0 0 0 50617 3733 45429 424474;424475;424476;424477;424478;424479;424480 334923;334924;334925;334926;334927;334928;334929 334924 7 TASESISNLSEAGSIK Unmodified 1592.7893 0.78934511 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 58.407 57.24 2 2.8769E-41 72425 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 146.5 132.34 673510000 6472200 455850000 0 11635000 12674000 15235000 15000000 17714000 15753000 21247000 23093000 14493000 17261000 14885000 32195000 50618 1286 45430 424481;424482;424483;424484;424485;424486;424487;424488;424489;424490;424491;424492;424493;424494;424495;424496 334930;334931;334932;334933;334934;334935;334936;334937;334938;334939;334940;334941;334942;334943;334944;334945 334933 15 TASETRSEGSEYEEIPK Unmodified 1911.8698 0.86978027 1546 P48634 PRRC2A Protein PRRC2A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.128 36.309 3 0.00030026 39512 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 58.98 52.252 159240000 0 0 0 7282500 9484900 11008000 10131000 13780000 13123000 13379000 14710000 19543000 18422000 13912000 14462000 50619 1546 45431 424497;424498;424499;424500;424501;424502;424503;424504;424505;424506;424507;424508 334946;334947;334948;334949;334950;334951;334952;334953;334954;334955;334956;334957;334958 334956 13 TASFSESR Unmodified 883.40356 0.40356022 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.127 13.282 2 0.0043032 12076 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 133.6 105.9 853540000 0 0 0 37981000 45089000 39473000 203660000 118070000 151770000 61518000 72683000 101590000 3155200 3394600 15156000 50620 1714 45432 424509;424510;424511;424512;424513;424514;424515;424516;424517;424518;424519;424520 334959;334960;334961;334962;334963;334964;334965;334966;334967 334963 7 TASFSESRADEVAPAK Unmodified 1664.8006 0.8005785 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 3 30 1 1 1 2 2 2 2 4 4 2 3 3 2 2 2 34.362 34.447 2;3 9.8241E-19 37705 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 111.12 91.361 13743000000 360340 390470 4849600 373380000 635720000 894540000 2670600000 2691500000 3002900000 640620000 1217100000 1307200000 34349000 64323000 205450000 50621 1714 45433 424521;424522;424523;424524;424525;424526;424527;424528;424529;424530;424531;424532;424533;424534;424535;424536;424537;424538;424539;424540;424541;424542;424543;424544;424545;424546;424547;424548;424549;424550;424551;424552;424553 334968;334969;334970;334971;334972;334973;334974;334975;334976;334977;334978;334979;334980;334981;334982;334983;334984;334985;334986;334987;334988;334989;334990 334977 21 TASFSESRADEVAPAKK Unmodified 1792.8955 0.89554151 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 2 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 28.025 28.219 3;4 2.7396E-19 29995 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 98.572 95.053 7277700000 0 0 0 258010000 529510000 173130000 1793600000 1854600000 754620000 328730000 626610000 846620000 20280000 21067000 70856000 50622 1714 45434 424554;424555;424556;424557;424558;424559;424560;424561;424562;424563;424564;424565;424566;424567;424568;424569;424570;424571;424572;424573;424574;424575;424576;424577 334991;334992;334993;334994;334995;334996;334997;334998;334999;335000;335001;335002;335003;335004;335005;335006;335007;335008 334999 10 TASFVARNGPEFEAR Unmodified 1650.8114 0.81141795 2539 Q15459 SF3A1 Splicing factor 3A subunit 1 yes yes 0 0 1 By MS/MS 2 0 1 1 60.559 52.317 3 0.02828 71024 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 33.624 28.168 6210900 6210900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50623 2539 45435 424578 335009 335009 1 TASGAVDEDALTLEELEEQQRR Unmodified 2459.1776 0.17758961 2912 Q6NZY4 ZCCHC8 Zinc finger CCHC domain-containing protein 8 yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 77.738 77.919 3 4.8776E-05 89622 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.105 41.473 18577000 0 0 0 0 0 0 0 0 0 5875500 0 0 0 0 12702000 50624 2912 45436 424579;424580 335010 335010 1 TASGSSVTSLDGTR Unmodified 1337.6423 0.64228694 3632 Q92597 NDRG1 Protein NDRG1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.031 30.224 2 1.0405E-07 31480 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 109.6 66.291 159030000 0 0 0 10589000 5004700 15048000 11740000 6995800 7106400 16118000 15949000 16036000 10871000 17072000 26499000 50625 3632 45437 424581;424582;424583;424584;424585;424586;424587;424588;424589;424590;424591;424592 335011;335012;335013;335014;335015;335016;335017;335018;335019;335020;335021;335022 335014 12 TASIKPEVALLDTQDMENMSDDDGWEFVNLGDQQSFGIK Unmodified 4342.9886 0.98859814 149 O00410 IPO5 Importin-5 yes yes 0 0 1 By MS/MS 2 0 1 1 98.197 90.067 3 1.9498E-26 116252 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.345 61.709 20429000 20429000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50626 149 45438 424593 335023 335023 1 TASISSSPSEGTPTVGSYGCTPQSLPK Unmodified 2695.2647 0.26469006 2961 Q6PKG0 LARP1 La-related protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 67.311 67.385 3 9.9201E-18 77297 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 59.359 50.15 93630000 0 0 0 5113700 5753300 7060800 8478900 7060900 0 9474900 9339400 14895000 6905100 8744300 10803000 50627 2961 45439 424594;424595;424596;424597;424598;424599;424600;424601;424602;424603;424604 335024;335025;335026;335027;335028;335029;335030;335031;335032;335033;335034;335035;335036;335037;335038;335039;335040 335037 17 TASNIGGFNAAIK Unmodified 1262.6619 0.66190017 4370 Q9H2M9 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57.719 56.812 2 4.6262E-33 72979 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 169.41 139.64 489880000 17346000 253230000 0 10318000 9465200 21872000 14399000 23682000 12893000 20560000 18213000 25980000 19082000 17522000 25315000 50628 4370 45440 424605;424606;424607;424608;424609;424610;424611;424612;424613;424614;424615;424616;424617;424618 335041;335042;335043;335044;335045;335046;335047;335048;335049;335050;335051;335052;335053;335054;335055 335044 15 TASNVEEAFINTAK Unmodified 1493.7362 0.73618733 1828 P61019 RAB2A Ras-related protein Rab-2A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.73 3.91 5 1 5 1 3 2 1 1 1 1 1 72.225 67.789 2;3 1.251E-58 85626 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 196.44 173.37 927080000 0 915640000 11446000 0 0 0 0 0 0 0 0 0 0 0 0 50629 1828 45441 424619;424620;424621;424622;424623;424624;424625;424626;424627;424628;424629 335056;335057;335058;335059;335060;335061;335062;335063;335064;335065;335066 335057 11 TASPIILHENNVSR Unmodified 1549.8213 0.82125436 2558 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.831 46 3 0.00039837 52432 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 65.092 55.304 169640000 0 0 0 6454300 9405100 11446000 13048000 13085000 10709000 17588000 14911000 17838000 19711000 14368000 21080000 50630 2558 45442 424630;424631;424632;424633;424634;424635;424636;424637;424638;424639;424640;424641 335067;335068;335069;335070;335071;335072;335073;335074;335075;335076;335077;335078;335079 335078 13 TASPLPLRPDAPVEK Unmodified 1589.8777 0.8777066 4517 Q9HCK8 CHD8 Chromodomain-helicase-DNA-binding protein 8 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 59.24 59.345 3 0.014154 66724 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.523 24.742 181360000 0 0 0 14757000 9889500 19873000 14268000 13210000 0 19742000 16374000 16706000 19389000 13797000 23350000 50631 4517 45443 424642;424643;424644;424645;424646;424647;424648;424649;424650;424651;424652 335080;335081;335082 335080 1 TASRPAPLVQQLSPSLLPNSK Unmodified 2203.2325 0.23246614 5299 Q9Y6X9 MORC2 MORC family CW-type zinc finger protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 79.145 79.288 3 4.1935E-08 91569 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 70.414 66.227 56112000 0 0 0 0 0 7507500 3688900 0 7812100 9356300 0 13240000 0 0 14508000 50632 5299 45444 424653;424654;424655;424656;424657;424658;424659 335083;335084;335085;335086;335087;335088;335089;335090 335083 8 TASRPDDIPDSPSSPK Unmodified 1668.7955 0.79549312 2833 Q5VZK9 LRRC16A Leucine-rich repeat-containing protein 16A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 2 1 1 1 1 2 2 2 2 2 2 2 32.052 32.286 2;3 0.00010834 34314 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 97.551 80.609 299600000 0 0 0 21429000 16971000 20872000 24281000 17030000 19864000 24121000 31132000 37803000 26366000 16519000 43215000 50633 2833 45445 424660;424661;424662;424663;424664;424665;424666;424667;424668;424669;424670;424671;424672;424673;424674;424675;424676;424677;424678;424679 335091;335092;335093;335094;335095;335096;335097;335098;335099;335100;335101;335102;335103 335095 11 TASSVIELTCTK Unmodified 1308.6595 0.65951691 954 P11717 IGF2R Cation-independent mannose-6-phosphate receptor yes yes 0 0 0 By MS/MS 2 0 1 1 59.461 53.618 2 0.0064572 69024 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.397 47.855 19754000 0 19754000 0 0 0 0 0 0 0 0 0 0 0 0 0 50634 954 45446 424680 335104 335104 1 TASTNNIAQAR Unmodified 1145.5789 0.57889882 4843 Q9UBI6 GNG12 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.463 15.633 2 1.3744E-05 15335 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 136.27 108.09 118520000 0 0 0 5306500 4789000 4055800 6290500 6142900 3793800 8076200 15195000 19050000 13634000 13093000 19092000 50635 4843 45447 424681;424682;424683;424684;424685;424686;424687;424688;424689;424690;424691;424692 335105;335106;335107;335108;335109;335110;335111;335112;335113;335114;335115 335112 11 TASTPTPPQTGGGLEPQANGETPQVAVIVRPDDR Unmodified 3455.7281 0.72808884 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 76.499 76.557 3;4 2.5007E-271 87947 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 205.89 200.46 4553300000 0 0 0 87546000 284640000 332910000 241010000 353610000 336790000 508540000 469240000 675830000 322120000 374640000 566430000 50636 2102 45448 424693;424694;424695;424696;424697;424698;424699;424700;424701;424702;424703;424704;424705;424706;424707;424708;424709;424710;424711;424712;424713;424714;424715;424716 335116;335117;335118;335119;335120;335121;335122;335123;335124;335125;335126;335127;335128;335129;335130;335131;335132;335133 335121 14 TASTSFEASNHK Unmodified 1278.584 0.58404378 4146 Q9BTF0 THUMPD2 THUMP domain-containing protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 14.243 10.929 2 1.1083E-06 14663 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.7 102.04 13573000 0 13573000 0 0 0 0 0 0 0 0 0 0 0 0 0 50637 4146 45449 424717 335134 335134 1 TASVFLLEK Unmodified 1006.5699 0.56989727 3887 Q96J01 THOC3 THO complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72.178 71.187 2 0.010773 82582 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 63.816 38.198 924370000 348980000 232950000 66849000 12044000 14822000 19666000 21919000 15603000 14327000 22518000 28320000 31174000 24361000 23827000 47013000 50638 3887 45450 424718;424719;424720;424721;424722;424723;424724;424725;424726;424727;424728;424729;424730;424731;424732 335135;335136;335137;335138;335139;335140;335141;335142;335143;335144;335145;335146;335147;335148 335147 9 TASWLAAELSK Unmodified 1175.6186 0.61863837 4655;5016 Q9NUU7;Q9UMR2 DDX19A;DDX19B ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX19B no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 77.74 76.559 2 4.3468E-09 96016 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.12 96.308 1585700000 685560000 488900000 123250000 8253900 0 26380000 13607000 29113000 11658000 29267000 31772000 33875000 21582000 23196000 59292000 50639 4655;5016 45451 424733;424734;424735;424736;424737;424738;424739;424740;424741;424742;424743;424744;424745;424746;424747 335149;335150;335151;335152;335153;335154;335155;335156;335157;335158;335159;335160 335151 12 TATAVAHCK Unmodified 957.4702 0.4702 1879 P62249 RPS16 40S ribosomal protein S16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 3 2 1 6.1257 2.9189 2 0.0015573 4318 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 132.57 116.46 2916700000 1121300000 1629000000 166400000 0 0 0 0 0 0 0 0 0 0 0 0 50640 1879 45452 424748;424749;424750;424751;424752;424753 335161;335162;335163;335164;335165;335166;335167;335168 335164 7 TATDEAYK Unmodified 897.40798 0.40797689 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS 2 0 1 1 9.9924 6.2177 2 0.028816 10251 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.282 49.448 17430000 17430000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50641 2344 45453 424754 335169 335169 1 TATDEAYKDPSNLQGK Unmodified 1736.8217 0.82170787 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 7 3.69 1 1 3 2 1 1 1 32.233 30.258 3 3.3495E-31 38565 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.06 122.03 99294000 0 85509000 0 3972500 3045100 0 6767000 0 0 0 0 0 0 0 0 50642 2344 45454 424755;424756;424757;424758;424759 335170;335171;335172 335171 3 TATEEWGTEDWNEDLSETK Unmodified 2239.9393 0.9393164 2380 Q14157 UBAP2L Ubiquitin-associated protein 2-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 2 1 2 1 1 2 2 2 2 2 2 75.923 76.005 2;3 8.5446E-245 87687 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 289.31 281.76 408610000 0 0 0 8975000 20360000 34713000 22588000 24638000 26866000 44862000 51424000 40837000 22358000 26160000 84825000 50643 2380 45455 424760;424761;424762;424763;424764;424765;424766;424767;424768;424769;424770;424771;424772;424773;424774;424775;424776;424777;424778;424779 335173;335174;335175;335176;335177;335178;335179;335180;335181;335182;335183;335184;335185;335186 335174 14 TATESFASDPILYRPVAVALDTK Unmodified 2464.285 0.28495522 1000 P14618 PKM Pyruvate kinase PKM yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 88.603 87.732 3 4.1756E-154 101703 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 158.73 154.48 1211300000 26478000 37766000 0 10305000 10763000 25492000 11914000 50219000 39204000 147830000 119440000 69134000 4138300 35845000 622760000 50644 1000 45456 424780;424781;424782;424783;424784;424785;424786;424787;424788;424789;424790;424791;424792;424793 335187;335188;335189;335190;335191;335192;335193;335194;335195;335196;335197;335198;335199;335200;335201;335202;335203 335195 17 TATFAISILQQIELDLK Unmodified 1903.0666 0.066629587 1816 P60842 EIF4A1 Eukaryotic initiation factor 4A-I yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 6 2 2 4 2 103.77 99.475 2;3 1.8602E-52 119497 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 178.32 172.83 18692000 6507200 9031100 3153900 0 0 0 0 0 0 0 0 0 0 0 0 50645 1816 45457 424794;424795;424796;424797;424798;424799;424800;424801 335204;335205;335206;335207;335208;335209;335210;335211;335212;335213 335210 10 TATFTIVTEDAGEGGLDLAIEGPSK Unmodified 2491.233 0.23297923 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.5 0.5 2 2 2 1 1 92.894 88.555 3 2.6135E-13 108296 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 79.762 72.506 41162000 24327000 4624600 12210000 0 0 0 0 0 0 0 0 0 0 0 0 50646 487 45458 424802;424803;424804;424805 335214;335215;335216;335217;335218;335219;335220;335221 335220 8 TATGAISAVFGR Unmodified 1149.6142 0.6142217 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.204 71.278 2 0.0013151 81856 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 68.893 59.499 63171000 0 0 0 4568300 3478000 6037900 4939000 5135400 2852600 5907200 6212700 9891300 5430600 5318700 3399100 50647 5189 45459 424806;424807;424808;424809;424810;424811;424812;424813;424814;424815;424816;424817 335222;335223;335224 335222 3 TATGLLYIIETQK Unmodified 1449.8079 0.80789571 3970 Q96RL7 VPS13A Vacuolar protein sorting-associated protein 13A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 88.585 87.344 2 0.020378 111159 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.408 43.622 15208000 4657200 0 0 0 0 0 0 1601400 0 2304600 0 2018800 0 1374600 3251900 50648 3970 45460 424818;424819;424820;424821;424822;424823 335225;335226 335225 2 TATGLTHIIETR Unmodified 1311.7147 0.71466402 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 52.247 52.691 3 0.0039302 59819 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 51.875 42.032 36202000 0 0 0 0 0 0 0 0 0 10296000 2912900 10079000 5191500 0 7722900 50649 3023 45461 424824;424825;424826;424827;424828 335227;335228;335229 335228 3 TATGLTHIIETRK Unmodified 1439.8096 0.80962704 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 43.317 43.556 3 0.00027934 48865 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 57.804 46.33 71709000 0 0 0 0 2320900 6678500 4823500 8615600 0 10251000 7775300 12042000 0 9399800 9802100 50650 3023 45462 424829;424830;424831;424832;424833;424834;424835;424836;424837;424838 335230;335231;335232;335233;335234;335235;335236;335237 335235 8 TATGPSTGGGTVISR Unmodified 1360.6947 0.69465686 3312 Q8N1G0 ZNF687 Zinc finger protein 687 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.709 29.901 2 0.00012251 31240 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.806 48.378 127100000 0 0 0 6443600 7580400 8344400 9222600 6284100 7316000 11436000 11441000 18078000 16674000 8069600 16208000 50651 3312 45463 424839;424840;424841;424842;424843;424844;424845;424846;424847;424848;424849;424850 335238;335239;335240;335241;335242;335243;335244;335245;335246;335247;335248;335249 335241 12 TATITEPR Unmodified 887.47125 0.47124585 2481 Q15029 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 2 1 2 1 20.418 20.641 2 0.0048728 20936 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 109.01 71.454 605270000 0 0 0 33911000 35534000 42471000 0 53266000 32165000 56495000 101080000 95956000 88047000 66346000 0 50652 2481 45464 424851;424852;424853;424854;424855;424856;424857;424858;424859;424860;424861;424862 335250;335251;335252;335253;335254;335255;335256;335257;335258;335259;335260;335261 335253 11 TATITEPRGNEEAQIFRPLK Unmodified 2270.2019 0.20189429 2481 Q15029 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 0 0 2 By MS/MS By MS/MS By MS/MS 6 4 2 2 2 1 1 71.263 67.373 3;4 3.7774E-91 90120 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 164.59 150.13 338240000 319540000 0 0 0 0 0 0 0 2799200 0 0 0 0 0 15908000 50653 2481 45465 424863;424864;424865;424866 335262;335263;335264;335265 335265 4 TATLRPYLSAVR Acetyl (Protein N-term) 1388.7776 0.77759863 1806 P59998 ARPC4 Actin-related protein 2/3 complex subunit 4 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 79.675 79.703 2 0.0032172 91715 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.353 34.68 112250000 0 0 0 6581000 6339300 8880000 6612600 8798000 6751300 0 0 25887000 0 0 42404000 50654 1806 45466 424867;424868;424869;424870;424871;424872;424873;424874 335266;335267;335268 335266 3 TATPEIVDNK Unmodified 1086.5557 0.55570376 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 1.75 0.433 1 3 2 1 1 52.236 49.987 2 9.316E-06 38067 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.06 110.36 197310000 52059000 143960000 1294700 0 0 0 0 0 0 0 0 0 0 0 0 50655 487 45467 424875;424876;424877;424878 335269;335270 335269 2 TATPQQAQEVHEK Unmodified 1465.7161 0.71612058 1808 P60174 TPI1 Triosephosphate isomerase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.31 3.73 1 8 3 23 4 6 2 2 2 2 2 2 1 2 2 2 2 2 2 16.899 16.078 2;3 6.7242E-42 12444 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 148.68 135.56 21934000000 1502400000 15662000000 374150000 186220000 26172000 18059000 17908000 24774000 8937000 35619000 569920000 835750000 44116000 480430000 2147600000 50656 1808 45468 424879;424880;424881;424882;424883;424884;424885;424886;424887;424888;424889;424890;424891;424892;424893;424894;424895;424896;424897;424898;424899;424900;424901;424902;424903;424904;424905;424906;424907;424908;424909;424910;424911;424912;424913 335271;335272;335273;335274;335275;335276;335277;335278;335279;335280;335281;335282;335283;335284;335285;335286;335287;335288;335289;335290;335291;335292;335293;335294;335295;335296;335297;335298;335299;335300;335301;335302;335303;335304;335305;335306;335307;335308;335309;335310 335284 38 TATQLAVNK Unmodified 944.5291 0.52909508 4065 Q99832 CCT7 T-complex protein 1 subunit eta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 21.05 21.261 2 0.003216 22194 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 90.777 65.326 924270000 0 0 0 52673000 45477000 67740000 80602000 81464000 0 77830000 111040000 108570000 88072000 77378000 133410000 50657 4065 45469 424914;424915;424916;424917;424918;424919;424920;424921;424922;424923;424924 335311;335312;335313;335314;335315;335316;335317;335318;335319;335320;335321 335311 11 TATQTGHTLLEDYQIVDNSQR Unmodified 2389.151 0.15098093 3301 Q8N0X7 SPG20 Spartin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 73.345 73.36 3 1.609E-11 83734 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 68.458 57.031 107640000 0 0 0 2989900 8841400 0 0 17324000 15668000 18704000 15035000 0 0 0 29077000 50658 3301 45470 424925;424926;424927;424928;424929;424930;424931;424932 335322;335323;335324;335325;335326;335327;335328 335327 7 TATQTGHTLLEDYQIVDNSQRENQEGAANVNVR Unmodified 3670.7572 0.75715714 3301 Q8N0X7 SPG20 Spartin yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 73.66 73.881 4 2.9418E-19 84705 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.339 34.708 17815000 0 0 0 0 0 0 0 0 0 6666100 0 0 0 0 11149000 50659 3301 45471 424933;424934 335329;335330 335330 2 TATTQETDGFQVK Unmodified 1424.6783 0.6783381 3856 Q96GM5 SMARCD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.852 38.033 2 4.4746E-09 42030 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 121.83 108.48 153400000 0 0 0 7877900 7612600 11555000 11564000 15051000 8474700 15409000 13835000 18538000 11648000 12767000 19066000 50660 3856 45472 424935;424936;424937;424938;424939;424940;424941;424942;424943;424944;424945;424946 335331;335332;335333;335334;335335;335336;335337;335338;335339;335340;335341;335342 335333 12 TATVYPEPQNK Unmodified 1246.6194 0.61936665 1534 P48163 ME1 NADP-dependent malic enzyme yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 30.284 28.315 2 0.00012555 30813 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 113.62 85.541 65570000 12290000 6687100 0 20522000 0 0 0 0 0 0 0 0 0 7999100 18072000 50661 1534 45473 424947;424948;424949;424950;424951;424952 335343;335344;335345;335346;335347;335348 335345 6 TAVAHRPGAFK Unmodified 1153.6356 0.63562584 3717 Q969H8 MYDGF Myeloid-derived growth factor yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 2 1 1 2 13.936 14.14 2;3 0.0037819 12654 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 43.958 31.899 520660000 0 0 0 11080000 11252000 9873200 8708600 11633000 0 13828000 53622000 116360000 14697000 56560000 213050000 50662 3717 45474 424953;424954;424955;424956;424957;424958;424959;424960;424961;424962;424963;424964;424965 335349;335350;335351;335352;335353;335354;335355;335356;335357;335358 335353 9 TAVAPIERVK Unmodified 1082.6448 0.64479354 963 P12236;P12235;P05141;Q9H0C2 SLC25A6;SLC25A4;SLC25A5;SLC25A31 ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed;ADP/ATP translocase 1;ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 4;ADP/ATP translocase 4, N-terminally processed yes no 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 38.745 32.95 2 0.037751 45534 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.862 43.753 47133000 39617000 7516200 0 0 0 0 0 0 0 0 0 0 0 0 0 50663 963 45475 424966;424967 335359 335359 0 TAVAPSAVNLADPR Unmodified 1380.7361 0.73612775 5066 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.861 58.974 2 0.00061638 66378 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.92 53.193 321660000 0 0 0 17626000 23464000 20270000 27430000 24630000 18667000 25131000 26924000 35492000 27019000 28257000 46744000 50664 5066 45476 424968;424969;424970;424971;424972;424973;424974;424975;424976;424977;424978;424979 335360;335361;335362;335363;335364;335365;335366;335367;335368;335369;335370;335371 335363 7 TAVCDIPPR Unmodified 1027.5121 0.51206481 1963;842;2350;4182;2678 P07437;A6NNZ2;P68371;Q13885;Q9BVA1;Q3ZCM7 TUBB;TUBB4B;TUBB2A;TUBB2B;TUBB8 Tubulin beta chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-8 chain no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 26 3 2 2 3 2 2 2 2 2 2 2 2 36.088 36.241 2 0.0031256 41047 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 91.069 55.188 3148000000 0 0 0 161470000 141520000 226180000 158300000 153670000 167910000 262090000 277260000 378020000 422180000 323190000 476250000 50665 842;1963;2350;4182;2678 45477 424980;424981;424982;424983;424984;424985;424986;424987;424988;424989;424990;424991;424992;424993;424994;424995;424996;424997;424998;424999;425000;425001;425002;425003;425004;425005 335372;335373;335374;335375;335376;335377;335378;335379;335380;335381;335382;335383;335384;335385;335386;335387;335388;335389;335390;335391;335392;335393;335394;335395;335396;335397;335398;335399;335400;335401;335402;335403;335404;335405;335406;335407;335408;335409;335410;335411;335412;335413;335414;335415;335416;335417;335418;335419;335420;335421;335422;335423;335424;335425;335426;335427;335428;335429;335430;335431;335432;335433;335434;335435;335436;335437;335438;335439;335440;335441;335442;335443;335444;335445;335446;335447;335448;335449;335450;335451;335452;335453;335454;335455;335456;335457;335458;335459;335460;335461;335462;335463;335464;335465;335466;335467;335468;335469;335470;335471;335472;335473;335474;335475;335476;335477;335478;335479;335480;335481;335482;335483;335484;335485;335486;335487;335488;335489;335490;335491;335492;335493;335494;335495;335496 335402 125 TAVCDIPPRGLK Unmodified 1325.7126 0.71255553 1963;842;2350;4182;2678 P07437;A6NNZ2;P68371;Q13885;Q9BVA1;Q3ZCM7 TUBB;TUBB4B;TUBB2A;TUBB2B;TUBB8 Tubulin beta chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-8 chain no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.95 3.45 1 7 3 31 4 5 2 2 5 3 2 2 2 5 2 1 3 3 1 48.713 47.502 2;3 1.8982E-13 65086 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 153.05 109.96 5176600000 2905500000 517110000 465780000 85301000 100170000 95139000 104810000 76409000 75245000 37795000 164650000 145090000 149940000 111920000 141830000 50666 842;1963;2350;4182;2678 45478 425006;425007;425008;425009;425010;425011;425012;425013;425014;425015;425016;425017;425018;425019;425020;425021;425022;425023;425024;425025;425026;425027;425028;425029;425030;425031;425032;425033;425034;425035;425036;425037;425038;425039;425040;425041;425042;425043;425044;425045;425046;425047 335497;335498;335499;335500;335501;335502;335503;335504;335505;335506;335507;335508;335509;335510;335511;335512;335513;335514;335515;335516;335517;335518;335519;335520;335521;335522;335523;335524;335525;335526;335527;335528;335529;335530;335531;335532;335533;335534;335535;335536;335537;335538;335539;335540;335541;335542;335543;335544;335545;335546;335547;335548;335549;335550;335551;335552;335553;335554;335555;335556;335557;335558;335559;335560;335561;335562;335563;335564;335565;335566;335567;335568;335569;335570;335571;335572;335573;335574;335575;335576;335577;335578;335579;335580;335581;335582;335583;335584;335585;335586;335587;335588;335589;335590;335591;335592;335593;335594;335595;335596;335597;335598;335599;335600;335601;335602;335603;335604;335605;335606;335607;335608;335609;335610;335611;335612;335613;335614;335615;335616;335617;335618;335619;335620;335621;335622;335623;335624;335625;335626;335627;335628;335629;335630;335631;335632;335633;335634;335635;335636;335637;335638;335639;335640;335641;335642;335643;335644;335645;335646;335647;335648;335649;335650;335651;335652;335653 335582 152 TAVDGPDLEMLTGQER Oxidation (M) 1746.8094 0.80942862 2402 Q14318 FKBP8 Peptidyl-prolyl cis-trans isomerase FKBP8 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 71.522 71.561 2 2.6815E-06 82651 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 81.431 73.127 67288000 0 0 0 3894500 5060000 5086500 5763000 4678000 3312800 5672700 13260000 9568700 5622900 5368200 0 50667 2402 45479 425048;425049;425050;425051;425052;425053;425054;425055;425056;425057;425058 335654;335655;335656;335657;335658;335659;335660;335661;335662;335663 335661 3936 10 TAVDGPDLEMLTGQER Unmodified 1730.8145 0.814514 2402 Q14318 FKBP8 Peptidyl-prolyl cis-trans isomerase FKBP8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 79.092 79.142 2 3.4618E-19 90679 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 126.1 75.818 49083000 0 0 0 2373900 0 6426100 0 5635800 0 7670600 7772900 6653100 5705400 6845600 0 50668 2402 45479 425059;425060;425061;425062;425063;425064;425065;425066;425067;425068 335664;335665;335666;335667;335668;335669;335670;335671;335672 335668 9 TAVDSGIPLLTNFQVTK Unmodified 1802.9778 0.97781458 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 90.824 90.932 2 3.0909E-18 105508 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 99.011 90.056 33479000 0 0 0 0 1596300 1647600 1785100 2104500 1568600 3697500 4415400 4061100 1534500 2347100 8721100 50669 1300 45480 425069;425070;425071;425072;425073;425074;425075;425076;425077;425078;425079 335673;335674;335675 335674 3 TAVDSLVAYSVK Unmodified 1251.6711 0.67106787 2135 Q07065 CKAP4 Cytoskeleton-associated protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.211 71.281 2 2.385E-05 82666 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 91.855 76.473 113740000 0 0 0 10371000 8849000 7740700 8052300 10022000 7155400 11532000 11350000 22629000 0 6361900 9674500 50670 2135 45481 425080;425081;425082;425083;425084;425085;425086;425087;425088;425089;425090;425091 335676;335677;335678;335679;335680;335681;335682;335683;335684;335685 335684 10 TAVETAVLLLR Unmodified 1184.7129 0.71287311 1570 P49368 CCT3 T-complex protein 1 subunit gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 2 2 1 1 1 1 1 84.079 84.155 2 2.0018E-05 97404 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 130.75 103.49 1751300000 0 0 0 38015000 86366000 140360000 119920000 113660000 139410000 212970000 161550000 200710000 78278000 143590000 316500000 50671 1570 45482 425092;425093;425094;425095;425096;425097;425098;425099;425100;425101;425102;425103;425104;425105 335686;335687;335688;335689;335690;335691;335692;335693;335694;335695;335696;335697;335698;335699;335700;335701;335702;335703;335704 335695 19 TAVFGFETSEAK Unmodified 1285.619 0.6190323 2444 Q14764 MVP Major vault protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.328 66.413 2 0.00094924 76372 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 72.2 54.688 93383000 0 0 0 6190100 3954200 6476300 6079700 6073800 5304900 8217500 7446000 13463000 9455800 6675300 14047000 50672 2444 45483 425106;425107;425108;425109;425110;425111;425112;425113;425114;425115;425116;425117 335705;335706;335707;335708;335709;335710;335711;335712;335713;335714;335715;335716;335717;335718 335705 13 TAVHAGNINFK Acetyl (Protein N-term) 1212.6251 0.62512073 1340 P35221 CTNNA1 Catenin alpha-1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 55.781 54.46 2 2.5226E-11 61748 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 159.79 133.69 1634000000 105390000 629850000 24696000 60970000 39653000 73837000 58174000 49235000 46111000 96677000 97862000 98454000 53297000 61067000 138750000 50673 1340 45484 425118;425119;425120;425121;425122;425123;425124;425125;425126;425127;425128;425129;425130;425131;425132;425133 335719;335720;335721;335722;335723;335724;335725;335726;335727;335728;335729;335730;335731;335732;335733;335734;335735;335736 335721 16 TAVHFQDSGK Unmodified 1088.5251 0.52507234 2996 Q6YHU6 THADA Thyroid adenoma-associated protein yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 20.713 16.946 2 0.017256 21527 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 66.568 47.785 26940000 21942000 0 4998000 0 0 0 0 0 0 0 0 0 0 0 0 50674 2996 45485 425134;425135 335737;335738 335738 2 TAVHNGLGENGSQAAGLDMDVGK Unmodified 2240.0492 0.049158397 667 O95544 NADK NAD kinase yes yes 0 0 0 By MS/MS 2 0 1 1 63.378 57.471 3 0.00016273 73613 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 59.005 43.414 29724000 0 29724000 0 0 0 0 0 0 0 0 0 0 0 0 0 50675 667 45486 425136 335739;335740 335739 2 TAVHNGLGENGSQAAGLDMDVGK Oxidation (M) 2256.0441 0.044073019 667 O95544 NADK NAD kinase yes yes 0 1 0 By MS/MS 2 0 1 1 50.751 45.005 3 7.317E-05 58560 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 47.564 39.276 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50676 667 45486 425137 335741 335741 811 1 TAVLTAFANGR Unmodified 1119.6037 0.60365701 716 O96019;O94805 ACTL6A;ACTL6B Actin-like protein 6A;Actin-like protein 6B yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 61.414 61.738 2 0.00035525 70908 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 88.136 74.443 184010000 0 0 0 0 0 0 0 0 0 23736000 28201000 36259000 21115000 22349000 52350000 50677 716 45487 425138;425139;425140;425141;425142;425143;425144;425145;425146;425147 335742;335743;335744;335745;335746;335747;335748;335749;335750;335751 335749 7 TAVNVPRQPTVTSVCSETSQELAEGQR Unmodified 2943.4356 0.43561199 3865 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 2 1 1 1 1 1 1 1 67.627 67.769 3 3.74E-60 77157 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 108.49 99.873 65740000 0 0 0 0 4026300 0 5671600 9787600 4375600 11785000 7902000 0 0 7387200 14805000 50678 3865 45488 425148;425149;425150;425151;425152;425153;425154;425155;425156 335752;335753;335754;335755;335756;335757;335758;335759;335760 335755 9 TAVPPGLSSLPLTSVGNTGMK Oxidation (M) 2042.0718 0.07179132 3915;3015 Q96L91;Q6ZTU2 EP400;EP400NL E1A-binding protein p400;EP400 N-terminal-like protein no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 84.185 84.219 3 0.00021074 97068 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 42.309 38.041 37331000 0 0 0 5879100 0 0 0 0 7493800 0 0 0 6663400 6379200 10915000 50679 3915;3015 45489 425157;425158;425159;425160;425161 335761 335761 4619 1 TAVPSPVEAAAASDPAAAR Unmodified 1750.885 0.88497683 2448 Q147X3 NAA30 N-alpha-acetyltransferase 30 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 64.782 64.797 2 2.6822E-17 74144 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 119.01 108.64 304830000 0 0 0 9542400 15882000 13845000 4519100 4191500 3757100 60410000 76616000 116060000 0 0 0 50680 2448 45490 425162;425163;425164;425165;425166;425167;425168;425169;425170 335762;335763;335764;335765;335766;335767;335768;335769;335770;335771;335772;335773 335762 12 TAVQYIESSDSEEIETSELPQK Unmodified 2482.1599 0.15987386 2411 Q14527 HLTF Helicase-like transcription factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 2 2 24 4 2 2 2 2 2 2 2 2 2 2 2 2 74.343 73.795 2;3 6.8824E-109 90148 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 226.7 197.72 1186900000 0 203420000 0 23095000 68983000 102250000 38292000 61446000 70214000 135830000 139920000 140340000 35009000 53155000 114940000 50681 2411 45491 425171;425172;425173;425174;425175;425176;425177;425178;425179;425180;425181;425182;425183;425184;425185;425186;425187;425188;425189;425190;425191;425192;425193;425194;425195;425196;425197;425198 335774;335775;335776;335777;335778;335779;335780;335781;335782;335783;335784;335785;335786;335787;335788;335789;335790;335791;335792 335780 18 TAVSCLSQNDWK Unmodified 1407.6453 0.64526383 3854 Q96GG9 DCUN1D1 DCN1-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 6.56 3.86 3 1 5 1 2 1 1 1 1 1 1 53.387 51.842 2 7.381E-55 66469 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 213.03 199.26 363530000 0 304460000 2807200 0 0 0 0 0 1687100 0 11565000 11568000 0 7528500 23910000 50682 3854 45492 425199;425200;425201;425202;425203;425204;425205;425206;425207 335793;335794;335795;335796;335797;335798;335799;335800 335794 8 TAVSDILK Unmodified 845.48583 0.48583328 3105 Q7Z589 EMSY Protein EMSY yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 52.37 52.504 2 0.031953 58347 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.611 13.309 29465000 0 0 0 7225100 1618000 0 2451100 1998000 1627000 0 2450700 3565800 0 3503200 5026500 50683 3105 45493 425208;425209;425210;425211;425212;425213;425214;425215;425216 335801;335802 335802 2 TAVSSELRTEVEENQK Unmodified 1818.8959 0.89593544 4751 Q9NYU2 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.54 3.69 4 9 2 2 1 1 1 1 1 1 1 1 1 47.456 46.036 2;3 1.3522E-37 60759 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 153.32 121.68 390450000 0 146200000 164120000 0 0 11818000 7391400 7676700 5439600 7507900 0 17247000 0 10174000 12880000 50684 4751 45494 425217;425218;425219;425220;425221;425222;425223;425224;425225;425226;425227;425228;425229 335803;335804;335805;335806;335807;335808;335809;335810;335811;335812 335806 10 TAVSVTQGGHSR Unmodified 1198.6054 0.60544792 1413 P40425 PBX2 Pre-B-cell leukemia transcription factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 2 1 1 2 2 2 2 10.707 10.835 2;3 2.3619E-05 8878 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.584 75.446 94184000 0 0 0 6034900 5176100 6794200 9256400 6833100 5551700 3312800 5629500 12265000 10100000 9169300 14062000 50685 1413 45495 425230;425231;425232;425233;425234;425235;425236;425237;425238;425239;425240;425241;425242;425243;425244;425245;425246;425247;425248;425249;425250;425251 335813;335814;335815;335816;335817;335818;335819;335820;335821 335815 8 TAVTSPDGSSEK Unmodified 1177.5463 0.54626129 5186 Q9Y485 DMXL1 DmX-like protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 11.215 11.206 2 0.028861 10086 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 37.344 23.137 3989800 0 0 0 1313400 0 1230500 0 1446000 0 0 0 0 0 0 0 50686 5186 45496 425252;425253;425254 335822 335822 1 TAVTTVPSMGIGLVK Oxidation (M) 1488.8222 0.82216556 3546 Q8WUH6 TMEM263 Transmembrane protein 263 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.65 2.93 2 1 14 1 2 2 2 1 1 1 1 1 1 1 1 1 1 71.079 70.529 2;3 3.3066E-35 80133 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 152.7 124.61 3857300000 0 46775000 0 236520000 292900000 320100000 409410000 220730000 214530000 309030000 467570000 523200000 182650000 214780000 419150000 50687 3546 45497 425255;425256;425257;425258;425259;425260;425261;425262;425263;425264;425265;425266;425267;425268;425269;425270;425271 335823;335824;335825;335826;335827;335828;335829;335830;335831;335832;335833;335834;335835;335836;335837;335838;335839;335840;335841;335842;335843;335844;335845;335846;335847;335848 335832 5041 26 TAVTTVPSMGIGLVK Unmodified 1472.8273 0.82725094 3546 Q8WUH6 TMEM263 Transmembrane protein 263 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 2 24 1 1 2 2 2 2 2 2 2 2 2 2 2 2 81.159 80.718 2;3 4.7509E-38 93438 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 145.91 132.79 4551600000 13910000 79713000 0 153750000 254230000 373680000 308830000 271860000 240700000 386410000 622850000 601350000 163330000 321640000 759400000 50688 3546 45497 425272;425273;425274;425275;425276;425277;425278;425279;425280;425281;425282;425283;425284;425285;425286;425287;425288;425289;425290;425291;425292;425293;425294;425295;425296;425297 335849;335850;335851;335852;335853;335854;335855;335856;335857;335858;335859;335860;335861;335862;335863;335864;335865;335866;335867;335868;335869;335870;335871;335872;335873;335874;335875 335850 16 TAVVIDLGEAFTK Unmodified 1362.7395 0.73948179 4759 Q9NZ32 ACTR10 Actin-related protein 10 yes yes 0 0 0 By MS/MS 2 0 1 1 88.773 86.329 2 0.044863 104483 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 51.927 31.937 2505200 0 0 2505200 0 0 0 0 0 0 0 0 0 0 0 0 50689 4759 45498 425298 335876 335876 1 TAVVPASHMSSLNVVK Unmodified 1638.8763 0.8763264 2648 Q2KHR2 RFX7 DNA-binding protein RFX7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 68.054 62.074 3 0.0005926 82490 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.918 56.701 36018000 19009000 14477000 2532600 0 0 0 0 0 0 0 0 0 0 0 0 50690 2648 45499 425299;425300;425301 335877;335878;335879 335878 3 TAVVVGTITDDVR Unmodified 1344.7249 0.72489436 2133 Q07020 RPL18 60S ribosomal protein L18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 2 1 1 1 1 66.15 66.235 2 6.9861E-16 76032 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 177.57 148.1 352850000 0 0 0 14473000 20833000 20649000 19080000 17589000 18420000 36940000 34912000 60101000 28769000 31042000 50041000 50691 2133 45500 425302;425303;425304;425305;425306;425307;425308;425309;425310;425311;425312;425313;425314 335880;335881;335882;335883;335884;335885;335886;335887;335888;335889;335890;335891;335892;335893 335889 14 TAVVVGTITDDVRVQEVPK Unmodified 2025.1106 0.11061967 2133 Q07020 RPL18 60S ribosomal protein L18 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 3 1 1 78.442 74.856 3 2.493E-10 91941 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 98.062 86.419 112960000 77440000 14891000 20627000 0 0 0 0 0 0 0 0 0 0 0 0 50692 2133 45501 425315;425316;425317;425318;425319 335894;335895;335896;335897;335898 335898 3 TAWDGSK Unmodified 763.35007 0.35006808 1408 P40123 CAP2 Adenylyl cyclase-associated protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 13.254 9.9598 2 0.038776 13295 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.784 16.981 49742000 0 49742000 0 0 0 0 0 0 0 0 0 0 0 0 0 50693 1408 45502 425320 335899 335899 1 TAWGQQPDLAANEAQLLRK Unmodified 2109.0967 0.096700937 5036 Q9UNM6 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 77.12 75.926 3 1.1733E-66 96215 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 146.67 142.14 661160000 352160000 0 38086000 4973400 13039000 28331000 0 0 0 50105000 47491000 53173000 0 0 73809000 50694 5036 45503 425321;425322;425323;425324;425325;425326;425327;425328;425329 335900;335901;335902;335903;335904;335905;335906;335907;335908 335903 9 TAWLDGK Unmodified 789.4021 0.40210366 1153 P23284 PPIB Peptidyl-prolyl cis-trans isomerase B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.36 3.98 5 6 2 1 2 1 1 1 1 1 1 38.059 35.914 2 0.038085 46207 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 82.305 35.642 444880000 143960000 62697000 67323000 0 0 0 11441000 12959000 10741000 0 0 0 17051000 22653000 96061000 50695 1153 45504 425330;425331;425332;425333;425334;425335;425336;425337;425338;425339;425340 335909;335910;335911;335912 335911 4 TAWVFDDK Unmodified 980.46035 0.46034682 804 P05198 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 61.012 61.346 2 0.020746 69053 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.546 32.361 147600000 0 0 0 0 0 0 0 12722000 0 0 25659000 30840000 15149000 21650000 41582000 50696 804 45505 425341;425342;425343;425344;425345;425346 335913;335914;335915;335916;335917 335913 4 TAYGPNGMNK Oxidation (M) 1067.4706 0.47059393 1641 P50990 CCT8 T-complex protein 1 subunit theta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 8.12 3.26 2 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 9.9618 9.3642 2 0.00081996 10918 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.41 105.18 231680000 230990 74336000 0 8000200 6503100 11455000 11677000 7808500 7960400 12550000 20843000 21053000 13913000 12873000 22473000 50697 1641 45506 425347;425348;425349;425350;425351;425352;425353;425354;425355;425356;425357;425358;425359;425360;425361;425362 335918;335919;335920;335921;335922;335923;335924;335925 335921 2633 8 TAYGPNGMNK Unmodified 1051.4757 0.4756793 1641 P50990 CCT8 T-complex protein 1 subunit theta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 20.501 20.377 2 0.0013642 20893 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 107.19 93.263 1050800000 0 257000000 0 38603000 32877000 73398000 41295000 37522000 27216000 64576000 78840000 99064000 66933000 68087000 165430000 50698 1641 45506 425363;425364;425365;425366;425367;425368;425369;425370;425371;425372;425373;425374;425375 335926;335927;335928;335929;335930;335931;335932;335933;335934;335935;335936;335937;335938;335939;335940 335932 13 TAYSYFYEAFEGYDSIDSPK Unmodified 2352.011 0.011024781 129 O00231 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 6 2 3 3 2 95.979 91.272 2;3 2.0836E-103 114492 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 178.07 171.63 119540000 88604000 28321000 2610000 0 0 0 0 0 0 0 0 0 0 0 0 50699 129 45507 425376;425377;425378;425379;425380;425381;425382;425383 335941;335942;335943;335944;335945;335946;335947;335948 335947 8 TCAAQLVSYPGK Unmodified 1293.6387 0.63872189 2170 Q09161 NCBP1 Nuclear cap-binding protein subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 52.736 51.564 2 0.00099499 58488 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 84.658 47.183 299040000 6691700 192050000 0 7426200 5915500 0 4319300 0 6729400 8964800 0 20527000 10540000 16309000 19559000 50700 2170 45508 425384;425385;425386;425387;425388;425389;425390;425391;425392;425393;425394;425395 335949;335950;335951;335952;335953;335954;335955;335956 335955 8 TCATDLQTK Unmodified 1036.4859 0.48590964 701 O95861 BPNT1 3'(2'),5'-bisphosphate nucleotidase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 15.259 14.649 2 0.0073452 19026 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.85 57.829 47051000 22493000 0 0 0 0 3354500 0 0 0 0 0 4248200 0 5447500 11508000 50701 701 45509 425396;425397;425398;425399;425400 335957;335958;335959 335958 3 TCDFFSPYENGEK Unmodified 1592.6453 0.64532341 2895 Q6N069 NAA16 N-alpha-acetyltransferase 16, NatA auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 67.267 66.708 2 7.1727E-18 84116 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.88 123.64 235300000 0 18644000 0 5278400 10625000 10029000 11400000 23837000 13459000 35420000 47447000 59161000 0 0 0 50702 2895 45510 425401;425402;425403;425404;425405;425406;425407;425408;425409;425410 335960;335961;335962;335963;335964;335965;335966;335967;335968;335969 335963 10 TCDFLPDFK Unmodified 1141.5114 0.51139611 1623 P50452 SERPINB8 Serpin B8 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 81.566 77.564 2 0.0090639 96349 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.37 78.782 52491000 0 52491000 0 0 0 0 0 0 0 0 0 0 0 0 0 50703 1623 45511 425411;425412 335970 335970 1 TCDGVQCAFEELVEK Unmodified 1783.7757 0.77568565 4536 Q9NP72 RAB18 Ras-related protein Rab-18 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 89.516 85.462 2 2.634E-06 106322 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.95 110.52 29797000 0 29797000 0 0 0 0 0 0 0 0 0 0 0 0 0 50704 4536 45512 425413;425414 335971;335972 335971 2 TCDISFSDPDDLLNFK Unmodified 1885.8404 0.8403944 1831 P61081 UBE2M NEDD8-conjugating enzyme Ubc12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.38 0.484 5 3 2 4 2 94.008 89.244 2;3 4.6317E-58 110734 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 221.6 218.28 451970000 70939000 378520000 2509900 0 0 0 0 0 0 0 0 0 0 0 0 50705 1831 45513 425415;425416;425417;425418;425419;425420;425421;425422 335973;335974;335975;335976;335977;335978;335979;335980;335981;335982;335983;335984;335985;335986;335987;335988;335989;335990 335974 17 TCDLVGEK Unmodified 920.42733 0.42733213 1108 P20645 M6PR Cation-dependent mannose-6-phosphate receptor yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By matching 10 0 6 1 1 1 1 1 1 20.267 20.487 2 0.01701 21338 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 66.351 35.293 93480000 0 0 0 12389000 17615000 12049000 0 0 0 0 17114000 23540000 0 0 10773000 50706 1108 45514 425423;425424;425425;425426;425427;425428 335991 335991 1 TCDTMVFNHPAIK Unmodified 1532.7116 0.71156925 5000 Q9ULM3 YEATS2 YEATS domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 62.627 56.591 3 0.0017834 76435 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.252 45.341 8701500 6243000 0 2458500 0 0 0 0 0 0 0 0 0 0 0 0 50707 5000 45515 425429;425430 335992 335992 1 TCEDPRPPNGQSPIALASGQSEYGFAEK Unmodified 3005.3825 0.38251379 2867 Q6BDS2 UHRF1BP1 UHRF1-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 74.78 74.906 3 5.5515E-31 85582 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 80.847 78.262 91727000 0 0 0 0 7167000 0 4406300 13974000 5315700 12062000 9249800 11762000 6696900 9247400 11846000 50708 2867 45516 425431;425432;425433;425434;425435;425436;425437;425438;425439;425440 335993;335994;335995;335996;335997;335998;335999;336000;336001;336002 335999 10 TCEESSFCK Unmodified 1146.4322 0.43215951 2441 Q14697 GANAB Neutral alpha-glucosidase AB yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.38 3.93 2 2 9 2 2 1 1 1 1 1 1 1 1 1 31.253 31.238 2 0.0019426 22683 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 131.06 108.93 251940000 50131000 176170000 0 1244400 1129500 921500 0 0 791420 0 4584400 2986100 2854900 3695200 7430700 50709 2441 45517 425441;425442;425443;425444;425445;425446;425447;425448;425449;425450;425451;425452;425453 336003;336004;336005;336006;336007;336008;336009 336006 7 TCESDTLEALLLTASERPK Unmodified 2133.0623 0.062348845 4751 Q9NYU2 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 3.8 3.12 3 1 1 1 2 1 1 94.297 90.587 3 5.0202E-05 104655 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.648 57.462 71027000 12687000 50262000 4825100 0 0 0 0 0 0 0 0 0 0 0 3253400 50710 4751 45518 425454;425455;425456;425457;425458 336010;336011;336012;336013;336014 336010 5 TCEWTGLK Unmodified 993.45897 0.45896661 2984 Q6UXN9 WDR82 WD repeat-containing protein 82 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 43.753 43.834 2 0.017303 48080 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 65.88 45.598 68587000 0 0 0 0 4533600 0 6178600 8991100 0 16121000 0 0 13016000 19747000 0 50711 2984 45519 425459;425460;425461;425462;425463;425464 336015;336016;336017 336016 3 TCFIILSK Unmodified 980.53649 0.53648865 344 O43592 XPOT Exportin-T yes yes 0 0 0 By MS/MS 2 0 1 1 79.289 71.158 2 0.038308 93362 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.379 21.253 28925000 28925000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50712 344 45520 425465 336018 336018 1 TCFYAEQGGQIYDEGYLVK Unmodified 2240.0096 0.0095849934 1578 P49588 AARS Alanine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 6 2 2 4 2 82.565 78.279 2;3 1.9536E-90 97625 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 237.48 225.31 878410000 82225000 750680000 45509000 0 0 0 0 0 0 0 0 0 0 0 0 50713 1578 45521 425466;425467;425468;425469;425470;425471;425472;425473 336019;336020;336021;336022;336023;336024;336025;336026 336019 7 TCGDVLDNLK Unmodified 1133.5387 0.53867349 1701 P52788 SMS Spermine synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.71 3.81 2 1 4 1 2 1 1 1 1 56.231 53.801 2 1.9678E-06 68569 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 150.17 123.73 378560000 10312000 323020000 0 0 0 0 0 0 0 0 8310200 9605100 0 6351000 20968000 50714 1701 45522 425474;425475;425476;425477;425478;425479;425480 336027;336028;336029 336027 3 TCGFDFTGAVEDISK Unmodified 1645.7294 0.72938739 730 P00505 GOT2 Aspartate aminotransferase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.5 2.93 4 1 1 1 3 1 1 86.174 82.299 2 1.5734E-56 102486 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 171.26 166.2 556020000 9603900 533380000 7463600 0 0 0 0 0 0 0 0 0 0 0 5566900 50715 730 45523 425481;425482;425483;425484;425485;425486 336030;336031;336032;336033;336034;336035 336030 5 TCGLINSVK Unmodified 990.51682 0.51681584 411 O60547 GMDS GDP-mannose 4,6 dehydratase yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 44.791 38.685 2 0.0097659 53231 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.67 34.883 157150000 16184000 140970000 0 0 0 0 0 0 0 0 0 0 0 0 0 50716 411 45524 425487;425488 336036;336037 336037 2 TCHLTNHCIQK Unmodified 1410.6496 0.6496377 3454 Q8NG68 TTL Tubulin--tyrosine ligase yes yes 0 0 0 By MS/MS 2 0 1 1 17.565 13.185 2 0.006096 19454 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.338 66.187 4891700 4891700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50717 3454 45525 425489 336038 336038 1 TCHSFIINEK Unmodified 1247.5969 0.59685707 4033 Q99613;B5ME19 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38.875 37.88 3 0.0005079 53543 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.692 72.051 832030000 557270000 63589000 96170000 6294100 5831400 7707700 5896900 0 6964800 6665100 13052000 22478000 12508000 12668000 14932000 50718 4033 45526 425490;425491;425492;425493;425494;425495;425496;425497;425498;425499;425500;425501;425502;425503 336039;336040;336041;336042;336043;336044;336045;336046;336047;336048;336049;336050 336044 10 TCIEAHQRVK Unmodified 1240.6346 0.63463956 5052 Q9UPN9 TRIM33 E3 ubiquitin-protein ligase TRIM33 yes yes 0 0 1 By MS/MS By matching 2 0 2 1 1 12.275 9.1506 3 0.008556 14054 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.19 44.742 64860000 63235000 0 1625300 0 0 0 0 0 0 0 0 0 0 0 0 50719 5052 45527 425504;425505 336051 336051 1 TCLDNLASK Unmodified 1020.491 0.49099502 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 34.506 34.623 2 0.011371 38661 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 102.07 72.26 548650000 0 0 0 53236000 7063600 57972000 16387000 5225500 52618000 39259000 124410000 134090000 58388000 0 0 50720 1518 45528 425506;425507;425508;425509;425510;425511;425512;425513;425514;425515 336052;336053;336054;336055;336056;336057 336057 2 TCLLISYTTNK Unmodified 1312.6697 0.66968766 1821 P60953 CDC42 Cell division control protein 42 homolog yes yes 0 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 2 2 74.496 67.228 2 2.3902E-11 85908 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 153.24 135.02 167820000 133290000 34528000 0 0 0 0 0 0 0 0 0 0 0 0 0 50721 1821 45529 425516;425517;425518;425519 336058;336059;336060;336061;336062 336059 5 TCLLNETGDEPFQYK Unmodified 1813.8193 0.81926503 1012 P15104 GLUL Glutamine synthetase yes yes 0 0 0 By MS/MS 10 0 1 1 75.269 74.749 2 1.7655E-20 86659 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 116.55 93.629 5081500 0 0 0 5081500 0 0 0 0 0 0 0 0 0 0 0 50722 1012 45530 425520 336063 336063 1 TCLPGFPGAPCAIK Unmodified 1487.7265 0.72649104 1663 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 83.408 76.983 2 0.024925 97490 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 44.765 28.511 57228000 6607000 50621000 0 0 0 0 0 0 0 0 0 0 0 0 0 50723 1663 45531 425521;425522 336064;336065 336064 2 TCMHTVSDK Unmodified 1077.4583 0.45831468 1204 P26374 CHML Rab proteins geranylgeranyltransferase component A 2 yes yes 0 0 0 By MS/MS 2 0 1 1 7.6425 5.4153 2 0.032354 7442 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 65.305 39.568 2917300 0 0 2917300 0 0 0 0 0 0 0 0 0 0 0 0 50724 1204 45532 425523 336066 336066 1 TCMSEETSNQK Unmodified 1313.5228 0.52276543 2368 Q14119 VEZF1 Vascular endothelial zinc finger 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 8.2126 8.3673 2 0.0018367 5968 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.749 77.784 24312000 0 0 0 0 769000 1203300 1458500 1726900 1486700 1692600 5441300 2628400 2159000 2621700 3124700 50725 2368 45533 425524;425525;425526;425527;425528;425529;425530;425531;425532;425533;425534 336067;336068;336069;336070;336071 336067 5 TCNCETEDYGEK Unmodified 1504.5446 0.54462308 2046 Q00839 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.48 1 2 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 20.539 20.293 2 1.6523E-44 92544 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 203.02 186.8 268340000 78082000 24268000 0 7860000 13965000 11867000 8572700 8978900 7715100 17668000 16989000 13884000 19760000 17764000 20965000 50726 2046 45534 425535;425536;425537;425538;425539;425540;425541;425542;425543;425544;425545;425546;425547;425548;425549;425550 336072;336073;336074;336075;336076;336077;336078;336079;336080;336081;336082;336083;336084;336085;336086;336087;336088 336079 17 TCNPTYNEMLVYDGIPK Unmodified 2013.9176 0.91759886 178 O00750 PIK3C2B Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit beta yes yes 0 0 0 By MS/MS 2 0 1 1 85.691 80.916 2 6.8989E-19 100596 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 141.32 128.52 74934000 0 74934000 0 0 0 0 0 0 0 0 0 0 0 0 0 50727 178 45535 425551 336089 336089 1 TCNTMNQFVNK Oxidation (M) 1371.5911 0.59111977 3053 Q7L5N1 COPS6 COP9 signalosome complex subunit 6 yes yes 0 1 0 By MS/MS 2 0 1 1 24.504 20.376 2 2.5401E-12 26970 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 155.07 143.02 13458000 0 13458000 0 0 0 0 0 0 0 0 0 0 0 0 0 50728 3053 45536 425552 336090;336091 336091 4681 2 TCNTMNQFVNK Unmodified 1355.5962 0.59620515 3053 Q7L5N1 COPS6 COP9 signalosome complex subunit 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 40.853 39.497 2 3.6065E-09 50023 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 164.96 154.13 160410000 9425200 122240000 0 0 0 0 0 0 0 0 4174200 10250000 4012300 4240400 6067000 50729 3053 45536 425553;425554;425555;425556;425557;425558;425559 336092;336093;336094;336095;336096;336097;336098;336099 336092 8 TCNTNPHLNALSTDSACRR Unmodified 2186.9909 0.99093201 4762 Q9NZB2 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 yes yes 0 0 1 By MS/MS 10 0 1 1 35.752 35.301 4 0.020223 39189 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 24.893 22.224 4810900 0 0 0 0 4810900 0 0 0 0 0 0 0 0 0 0 50730 4762 45537 425560 336100 336100 1 TCPTFSAPVGESATAK Unmodified 1622.761 0.76102187 2956 Q6PIW4 FIGNL1 Fidgetin-like protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 52.374 52.56 2 0.00069565 58563 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 59.57 39.266 36688000 0 0 0 0 3915600 4430700 0 0 3444600 0 5668500 6471400 5758000 6999500 0 50731 2956 45538 425561;425562;425563;425564;425565;425566;425567 336101;336102;336103;336104;336105 336103 5 TCQQTWEK Unmodified 1079.4706 0.47059393 1122 P21283 ATP6V1C1 V-type proton ATPase subunit C 1 yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 18.37 14.367 2 0.0035264 18676 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.27 91.75 74211000 3847700 70363000 0 0 0 0 0 0 0 0 0 0 0 0 0 50732 1122 45539 425568;425569 336106 336106 1 TCRESAEALATK Unmodified 1335.6453 0.64526383 6 A0MZ66 KIAA1598 Shootin-1 yes yes 0 0 1 By matching By MS/MS 2 0 2 1 1 22.946 19.057 2 0.040502 24133 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 70.1 49.23 19452000 4639300 0 14813000 0 0 0 0 0 0 0 0 0 0 0 0 50733 6 45540 425570;425571 336107 336107 1 TCRETEVGDPAGNELAEPEAK Unmodified 2272.0278 0.027754253 3848 Q96G46 DUS3L tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 49.999 43.813 3 4.0576E-38 57302 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.04 122.38 60105000 6564500 53540000 0 0 0 0 0 0 0 0 0 0 0 0 0 50734 3848 45541 425572;425573;425574 336108;336109;336110 336108 3 TCSDDVVDYFK Unmodified 1347.5653 0.56528217 3941 Q96P11 NSUN5 Probable 28S rRNA (cytosine-C(5))-methyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.392 70.467 2 0.0016512 80540 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 71.349 67.762 107790000 0 0 0 4873700 8238300 9215000 5411900 5578300 9054800 7282500 10674000 16425000 7872000 10609000 12551000 50735 3941 45542 425575;425576;425577;425578;425579;425580;425581;425582;425583;425584;425585;425586 336111;336112;336113;336114;336115;336116;336117;336118;336119;336120;336121;336122 336115 12 TCSPASLSQASADLEATLR Unmodified 1976.9473 0.94731909 2401 Q14258 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes yes 0 0 0 By MS/MS 2 0 1 1 88.394 83.552 2 2.5577E-06 103857 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.932 64.556 15064000 0 15064000 0 0 0 0 0 0 0 0 0 0 0 0 0 50736 2401 45543 425587 336123 336123 1 TCSPASLSQASADLEATLRHK Unmodified 2242.1012 0.10119397 2401 Q14258 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes yes 0 0 1 By MS/MS 2 0 2 2 84.989 76.858 3;4 1.1881E-82 100447 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 150.68 145.87 151110000 151110000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50737 2401 45544 425588;425589 336124;336125;336126 336125 3 TCSQVSSYSLEQESNGEIEHVTK Unmodified 2611.1708 0.17078968 1463 P42695 NCAPD3 Condensin-2 complex subunit D3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.71 3.81 2 1 4 2 1 1 1 1 1 62.722 61.338 3 2.7529E-38 78065 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.733 84.859 65212000 0 43794000 1075100 0 0 0 2412800 0 0 0 0 6173500 2557500 0 9199800 50738 1463 45545 425590;425591;425592;425593;425594;425595;425596 336127;336128;336129;336130;336131 336127 5 TCSVSTLSASVHNGAQVK Unmodified 1844.9051 0.90506034 4288 Q9C0D5 TANC1 Protein TANC1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 51.268 45.303 3 0.0027022 57344 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 41.554 32.024 25797000 21753000 0 4043900 0 0 0 0 0 0 0 0 0 0 0 0 50739 4288 45546 425597;425598 336132;336133 336132 2 TCTESDVSQSQNSR Unmodified 1597.6638 0.66382702 679 O95677 EYA4 Eyes absent homolog 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 9.4302 9.5876 2 0.00014628 8330 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 82.379 73.191 18863000 0 0 0 0 681360 917590 1393500 1243100 856940 1503300 2983100 2875800 1995400 1798800 2614500 50740 679 45547 425599;425600;425601;425602;425603;425604;425605;425606;425607;425608;425609 336134;336135;336136;336137;336138;336139;336140;336141 336140 8 TCTFILR Unmodified 909.47422 0.47422274 4065 Q99832 CCT7 T-complex protein 1 subunit eta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 55.86 55.875 2 0.023406 64649 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 86.866 56.668 145110000 0 0 0 14795000 11860000 15865000 14766000 21865000 12399000 0 0 31574000 0 21991000 0 50741 4065 45548 425610;425611;425612;425613;425614;425615;425616;425617 336142;336143;336144;336145 336144 4 TCTLDDLREGIER Unmodified 1576.7515 0.75151981 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 1 By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 61.288 61.46 3 0.01399 70167 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 41.092 34.511 66103000 0 0 0 0 4823200 3585500 4187000 5461200 4455000 5671400 5205400 10759000 6809900 5109300 10035000 50742 3023 45549 425618;425619;425620;425621;425622;425623;425624;425625;425626;425627;425628 336146;336147 336147 0 TCTTQHQLPK Unmodified 1212.5921 0.59210605 3453 Q8NG31 CASC5 Protein CASC5 yes yes 0 0 0 By MS/MS 2 0 1 1 16.067 11.954 2 0.014355 17505 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.614 51.284 9720200 9720200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50743 3453 45550 425629 336148 336148 1 TCTTVAFTQVNSEDK Unmodified 1699.7723 0.77231483 1900 P62424 RPL7A 60S ribosomal protein L7a yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 2 1 1 1 1 1 1 1 51.38 50.46 2 8.4627E-116 63761 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 260.6 236.61 187930000 0 62454000 0 8701400 22100000 0 0 0 0 0 33137000 0 28876000 0 32663000 50744 1900 45551 425630;425631;425632;425633;425634;425635;425636;425637;425638;425639;425640 336149;336150;336151;336152;336153;336154;336155;336156;336157 336151 9 TCTVSELEAQLR Unmodified 1405.6871 0.68712864 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 71.729 72.003 2 0.0065461 82308 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.434 21.412 10746000 0 0 0 0 0 0 0 0 0 0 2621200 0 0 2065800 6058500 50745 2291 45552 425641;425642;425643 336158 336158 1 TCTYEGCSETTSQVAK Unmodified 1820.7557 0.75567849 139 O00287 RFXAP Regulatory factor X-associated protein yes yes 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 28.119 28.332 2 1.1095E-07 29467 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 88.441 79.487 28570000 0 0 0 0 1509800 0 3357000 2779000 2319600 3172300 5233100 3462900 2896300 3840400 0 50746 139 45553 425644;425645;425646;425647;425648;425649;425650;425651;425652 336159 336159 1 TCVADESAENCDK Unmodified 1497.5712 0.57117219 64 CON__P02768-1;P02768 ALB Serum albumin yes no 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 14.583 14.505 2 1.8274E-124 13900 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 211.64 209.24 + 83992000 0 0 0 83017000 0 0 974400 0 0 0 0 0 0 0 0 50747 64 45554 425653;425654;425655;425656 336160;336161;336162;336163 336162 4 TCVADESHAGCEK Unmodified 1462.5817 0.58167729 65 CON__P02769 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.4 2.04 1 1 23 2 2 2 2 2 2 2 2 1 2 2 2 2 9.6183 9.4658 2;3 0.00049882 8087 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 67.115 66.484 + 317580000 0 101450000 0 18271000 32607000 8885100 11780000 7040500 10649000 21750000 40639000 26174000 12988000 9671200 15671000 50748 65 45555 425657;425658;425659;425660;425661;425662;425663;425664;425665;425666;425667;425668;425669;425670;425671;425672;425673;425674;425675;425676;425677;425678;425679;425680;425681 336164;336165;336166;336167;336168;336169;336170;336171;336172;336173;336174;336175;336176;336177;336178;336179;336180;336181 336179 15 TCVPADINKEEEFVEEFNRLK Unmodified 2566.2374 0.2373531 2022 P98170 XIAP E3 ubiquitin-protein ligase XIAP yes yes 0 0 2 By MS/MS 2 0 1 1 91.499 83.369 4 0.011598 108165 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 33.676 26.23 12194000 12194000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50749 2022 45556 425682 336182 336182 0 TCVQEITAHRK Unmodified 1341.6823 0.68231804 4606;2225 Q9NRL3;Q13033 STRN4;STRN3 Striatin-4;Striatin-3 no no 0 0 1 By MS/MS 2 0 1 1 24.321 19.345 3 0.0019751 27416 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.29 50.741 72351000 72351000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50750 4606;2225 45557 425683 336183 336183 1 TDAAVEMK Unmodified 863.40587 0.4058684 2621 Q16643 DBN1 Drebrin yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 18.753 15.153 2 0.014369 19545 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.909 15.68 27042000 0 27042000 0 0 0 0 0 0 0 0 0 0 0 0 0 50751 2621 45558 425684;425685 336184 336184 1 TDACFIR Unmodified 881.40654 0.40653711 1369 P35998 PSMC2 26S protease regulatory subunit 7 yes yes 0 0 0 By MS/MS 10 0 1 1 34.876 35.603 2 0.045927 38175 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.138 43.208 7830800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7830800 50752 1369 45559 425686 336185 336185 1 TDAETLPALK Unmodified 1057.5655 0.56554017 310 O43252 PAPSS1 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.91 3.42 2 1 8 1 2 1 1 1 1 1 1 1 1 52.611 51.354 2 0.0083227 62616 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 78.516 58.73 304350000 0 237050000 0 0 6111100 13051000 7523100 0 7488900 14423000 0 0 0 0 18706000 50753 310 45560 425687;425688;425689;425690;425691;425692;425693;425694;425695;425696;425697 336186;336187;336188;336189;336190;336191;336192;336193;336194 336189 8 TDAGGEDAILQTR Unmodified 1345.6474 0.64737232 4632 Q9NT62 ATG3 Ubiquitin-like-conjugating enzyme ATG3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 45.521 45.243 2 1.1985E-41 49831 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 174.77 150.74 451080000 0 69014000 0 21493000 18749000 36541000 24670000 23018000 17461000 39216000 44209000 34563000 33493000 30025000 58626000 50754 4632 45561 425698;425699;425700;425701;425702;425703;425704;425705;425706;425707;425708;425709;425710 336195;336196;336197;336198;336199;336200;336201;336202;336203;336204;336205;336206;336207;336208;336209 336199 15 TDAGGEDAILQTRTYDLYITYDK Unmodified 2621.2497 0.24969192 4632 Q9NT62 ATG3 Ubiquitin-like-conjugating enzyme ATG3 yes yes 0 0 1 By MS/MS 3 0 1 1 86.298 82.687 3 0.0021107 84143 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 40.756 32.952 1938400 1938400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50755 4632 45562 425711 336210 336210 1 TDAIFTPYPGFK Unmodified 1355.6762 0.67615325 4618 Q9NS73 MBIP MAP3K12-binding inhibitory protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 80.245 80.273 2 0.00066681 92871 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 76.228 59.557 110920000 0 0 0 6818700 10378000 12386000 4896200 0 5361700 17808000 16126000 22167000 6708300 8270300 0 50756 4618 45563 425712;425713;425714;425715;425716;425717;425718;425719;425720;425721 336211;336212;336213;336214;336215;336216;336217;336218;336219;336220;336221;336222;336223;336224 336218 14 TDALLPAAPQPLEK Acetyl (Protein N-term) 1504.8137 0.81370936 3215 Q8IUC4 RHPN2 Rhophilin-2 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 84.626 84.747 2 0.0011641 97406 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 53.237 47.266 16168000 0 0 0 0 0 0 5521300 0 0 0 0 0 5085700 5561300 0 50757 3215 45564 425722;425723;425724 336225;336226;336227 336226 3 TDALQPPHEYVPWVTVNGK Unmodified 2150.0797 0.07965389 978 P13284 IFI30 Gamma-interferon-inducible lysosomal thiol reductase yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 80.802 80.97 3 0.0016467 93316 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.888 30.069 13067000 0 0 0 0 0 0 0 1551800 0 2123000 0 0 0 0 9392400 50758 978 45565 425725;425726;425727 336228 336228 1 TDAPLNIR Unmodified 898.48723 0.48723027 2210 Q12931 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.364 41.542 2 0.0044555 46121 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 110.61 83.816 302570000 0 0 0 16451000 13536000 25541000 24025000 20697000 11576000 29981000 29709000 32288000 33383000 22649000 42734000 50759 2210 45566 425728;425729;425730;425731;425732;425733;425734;425735;425736;425737;425738;425739 336229;336230;336231;336232;336233;336234;336235;336236;336237;336238;336239 336236 11 TDAPQPDVK Unmodified 969.47673 0.47672516 1227 P27824 CANX Calnexin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 17.554 17.779 2 0.034739 18218 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 46.39 14.248 55782000 0 0 0 3544200 0 9600200 3066800 2569500 5821600 5186700 4321100 6208600 3671900 6139200 5652500 50760 1227 45567 425740;425741;425742;425743;425744;425745;425746;425747;425748;425749;425750 336240 336240 1 TDAPQPDVKEEEEEK Unmodified 1742.7847 0.78465366 1227 P27824 CANX Calnexin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 25.26 25.482 3 7.5718E-05 25872 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.898 61.636 78790000 0 0 0 0 6307700 17404000 0 0 9476500 9855300 7846800 9939700 8384100 9575700 0 50761 1227 45568 425751;425752;425753;425754;425755;425756;425757;425758;425759 336241;336242;336243;336244;336245;336246;336247;336248;336249 336243 9 TDAPQPDVKEEEEEKEEEK Unmodified 2258.0074 0.0073959665 1227 P27824 CANX Calnexin yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.23 2.37 3 28 2 1 2 2 2 2 2 2 2 3 3 3 2 3 27.036 26.751 2;3;4 9.132E-60 28645 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 157.98 144.56 1845900000 71784000 21516000 0 68985000 121220000 126600000 150670000 133350000 119340000 122210000 242720000 228400000 177410000 116030000 145710000 50762 1227 45569 425760;425761;425762;425763;425764;425765;425766;425767;425768;425769;425770;425771;425772;425773;425774;425775;425776;425777;425778;425779;425780;425781;425782;425783;425784;425785;425786;425787;425788;425789;425790 336250;336251;336252;336253;336254;336255;336256;336257;336258;336259;336260;336261;336262;336263;336264;336265;336266;336267;336268;336269;336270;336271;336272;336273;336274 336263 20 TDAPSGMELQSWYPVIK Unmodified 1920.9291 0.92914983 970 P12757 SKIL Ski-like protein yes yes 0 0 0 By MS/MS 2 0 1 1 93.17 88.259 2 8.6729E-08 109619 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.46 63.247 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50763 970 45570 425791 336275 336275 1 TDASSASSFLDSDELER Unmodified 1828.7963 0.79628098 2410 Q14498 RBM39 RNA-binding protein 39 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.26 73.326 2 5.5617E-41 84390 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 145.71 133.44 580450000 0 0 0 37997000 41900000 52269000 32611000 29701000 23215000 61303000 62412000 73512000 41855000 61849000 61823000 50764 2410 45571 425792;425793;425794;425795;425796;425797;425798;425799;425800;425801;425802;425803 336276;336277;336278;336279;336280;336281;336282;336283;336284;336285;336286;336287 336276 12 TDASSASSFLDSDELERTGIDLGTTGR Unmodified 2800.2999 0.29988959 2410 Q14498 RBM39 RNA-binding protein 39 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 84.733 84.873 3 2.31E-21 98282 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 70.091 63.442 26627000 0 0 0 0 0 0 0 0 0 9030900 0 4682300 0 0 12913000 50765 2410 45572 425804;425805;425806;425807 336288;336289;336290;336291;336292 336289 5 TDASVPVAVTPSPLTSLLTTATLEK Unmodified 2511.3684 0.3683505 3037 Q76L83 ASXL2 Putative Polycomb group protein ASXL2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 97.677 97.817 3 5.4276E-10 113567 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.588 48.789 5469600 0 0 0 0 0 0 0 0 0 2264900 0 0 0 0 3204700 50766 3037 45573 425808;425809 336293 336293 1 TDATTAIIK Unmodified 932.51786 0.51786169 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.57 3.96 3 4 1 1 1 1 1 1 1 36.679 34.499 2 0.0097334 38737 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 65.88 11.268 604450000 24938000 506430000 2192500 9374800 0 25208000 12795000 0 0 23504000 0 0 0 0 0 50767 3119 45574 425810;425811;425812;425813;425814;425815;425816 336294;336295;336296;336297;336298 336296 3 TDAVEALTALNHYQIR Unmodified 1813.9323 0.93226137 3567 Q8WVV9 HNRNPLL Heterogeneous nuclear ribonucleoprotein L-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 82.591 82.74 3 1.4164E-23 95447 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 115.82 102.4 36217000 0 0 0 0 0 3344400 0 2239600 2398600 3800700 2068000 3170000 0 0 19196000 50768 3567 45575 425817;425818;425819;425820;425821;425822;425823 336299;336300;336301;336302;336303;336304;336305 336301 7 TDAVLMTSDDSVTGSELSPLVK Unmodified 2264.1094 0.10935862 4254 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 yes yes 0 0 0 By MS/MS 2 0 1 1 87.603 82.794 2 2.4861E-74 102845 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 183.6 164.2 27034000 0 27034000 0 0 0 0 0 0 0 0 0 0 0 0 0 50769 4254 45576 425824 336306 336306 1 TDAVLPLTVAEVQK Unmodified 1482.8294 0.82935943 2285 Q13421 MSLN Mesothelin;Megakaryocyte-potentiating factor;Mesothelin, cleaved form yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 80.264 80.355 2 0.0015698 93257 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 54.143 43.392 39405000 0 0 0 1385400 0 1936100 2577400 1739800 1607800 4985400 6283600 4910300 3922800 4251500 5805200 50770 2285 45577 425825;425826;425827;425828;425829;425830;425831;425832;425833;425834;425835 336307;336308;336309;336310;336311;336312;336313 336312 7 TDCSSGDASRPSSDNADSPK Unmodified 2052.8291 0.82905445 4778 Q9NZN5 ARHGEF12 Rho guanine nucleotide exchange factor 12 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 9.2157 9.3393 3 0.010863 7653 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 28.505 27.953 12240000 0 0 0 0 1173100 1884700 2196600 0 758710 0 0 3234000 0 897600 2095500 50771 4778 45578 425836;425837;425838;425839;425840;425841;425842 336314;336315 336315 2 TDDCHPWVLPVVK Unmodified 1564.7708 0.77079869 1049 P17174 GOT1 Aspartate aminotransferase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 77.75 77.944 3 0.0082851 89501 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.684 22.855 41000000 0 0 0 0 0 0 0 0 0 0 5374500 7424200 0 6392800 21809000 50772 1049 45579 425843;425844;425845;425846 336316 336316 1 TDDDVIGQAPAEASPPPIAPK Unmodified 2088.0375 0.037514303 2708 Q53SF7 COBLL1 Cordon-bleu protein-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 17 1 2 2 2 1 2 2 2 1 1 1 71.346 71.404 2;3 1.2448E-15 81597 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.959 84.235 75376000 0 0 0 3136800 6810100 11427000 7331000 4283000 5155900 9445300 10347000 7655500 0 3870700 5914100 50773 2708 45580 425847;425848;425849;425850;425851;425852;425853;425854;425855;425856;425857;425858;425859;425860;425861;425862;425863 336317;336318;336319;336320;336321;336322;336323;336324;336325;336326 336321 10 TDDEVVQREEEAIQLDGLNASQIR Unmodified 2727.3311 0.33113014 1002 P14625 HSP90B1 Endoplasmin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 81.962 82.128 3 5.2629E-15 94750 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.896 68.449 52228000 0 0 0 0 0 0 0 0 0 14432000 12381000 0 0 0 25416000 50774 1002 45581 425864;425865;425866 336327;336328;336329 336328 3 TDDIARIYQPK Unmodified 1318.6881 0.68811492 2693 Q52LJ0 FAM98B Protein FAM98B yes yes 0 0 1 By MS/MS 2.5 0.5 2 2 4 53.32 47.969 2;3 0.0037575 62412 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.11 83.899 344010000 0 344010000 0 0 0 0 0 0 0 0 0 0 0 0 0 50775 2693 45582 425867;425868;425869;425870 336330;336331;336332 336331 2 TDDLSNDVCAVLK Unmodified 1448.6817 0.68170891 2604 Q16513 PKN2 Serine/threonine-protein kinase N2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 76.205 75.897 2 5.5757E-14 92888 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 152.7 97.166 452540000 0 303960000 0 4635500 8936900 12207000 9725800 9551200 8009300 16457000 15346000 16220000 14334000 14303000 18848000 50776 2604 45583 425871;425872;425873;425874;425875;425876;425877;425878;425879;425880;425881;425882;425883 336333;336334;336335;336336;336337;336338;336339;336340;336341;336342;336343;336344;336345 336336 11 TDDSNPREAILR Unmodified 1385.6899 0.68990583 4693 Q9NW82 WDR70 WD repeat-containing protein 70 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 34.7 34.579 3 0.0037837 37510 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 44.616 25.871 141550000 0 0 4966900 6027000 5409600 5995800 9906600 0 10577000 10959000 24602000 18575000 11897000 9691400 22942000 50777 4693 45584 425884;425885;425886;425887;425888;425889;425890;425891;425892;425893;425894;425895 336346;336347;336348;336349;336350;336351;336352 336348 7 TDDSQPPTLGQEILEEPSLPSSEVADEPPTLTK Unmodified 3519.6992 0.69919928 4095 Q9BQE9 BCL7B B-cell CLL/lymphoma 7 protein family member B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 89.024 89.178 3 2.3246E-13 103278 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.121 36.856 17008000 0 0 0 0 0 0 0 0 0 6672800 3198000 0 0 0 7136800 50778 4095 45585 425896;425897;425898 336353;336354;336355 336355 3 TDDSTSGARSSSTIRIK Unmodified 1780.8915 0.89151877 464 O75152;A0A1B0GTU1 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes no 0 0 2 By MS/MS 2 0 1 1 28.451 22.932 3 0.041355 32396 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.947 25.545 8834400 8834400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50779 464 45586 425899 336356 336356 1 TDDSTSGLTR Unmodified 1051.4782 0.47818172 4492 Q9HAW4 CLSPN Claspin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 13.929 14.069 2 0.018954 13427 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 48.091 27.392 16389000 0 0 0 1467000 0 0 2355800 1891800 1722600 2876400 0 3827100 2248700 0 0 50780 4492 45587 425900;425901;425902;425903;425904;425905;425906 336357;336358;336359;336360;336361 336357 5 TDDSVVPCFMK Unmodified 1297.5683 0.56825906 1331 P33981 TTK Dual specificity protein kinase TTK yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 73.661 73.055 2 0.0010732 90460 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.051 75.718 70729000 0 44498000 0 0 0 0 2842600 0 0 0 4402400 7355500 4289000 0 7342300 50781 1331 45588 425907;425908;425909;425910;425911;425912 336362;336363;336364 336362 3 TDDVLDLNNSDLIACTVITK Unmodified 2219.0991 0.099128282 2650 Q2KHT3 CLEC16A Protein CLEC16A yes yes 0 0 0 By MS/MS 2 0 1 1 93.627 88.731 3 0.0095498 110165 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 15.363 8.0305 15884000 0 15884000 0 0 0 0 0 0 0 0 0 0 0 0 0 50782 2650 45589 425913 336365 336365 1 TDDYGRDLSSVQTLLTK Unmodified 1910.9585 0.9585357 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.9 3.81 3 1 6 1 2 1 1 1 1 1 1 1 82.352 80.569 3 1.0424E-50 100565 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.11 125.01 538980000 20609000 432290000 13667000 0 0 6637000 0 0 0 10301000 7717800 6874800 0 6368600 34522000 50783 2344 45590 425914;425915;425916;425917;425918;425919;425920;425921;425922;425923 336366;336367;336368;336369;336370;336371;336372;336373;336374;336375 336368 8 TDDYLDQPCLETVNR Unmodified 1837.8152 0.81524228 1294 P31150 GDI1 Rab GDP dissociation inhibitor alpha yes yes 0 0 0 By MS/MS 10 0 1 1 67.622 68.139 2 1.3185E-07 77476 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 103.43 90.425 11354000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11354000 50784 1294 45591 425924 336376 336376 1 TDDYLDQPCYETINR Unmodified 1901.8102 0.8101569 1620 P50395 GDI2 Rab GDP dissociation inhibitor beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 2 1 1 1 1 1 1 1 64.264 64.373 2 2.2642E-83 72982 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 224.42 220.89 162430000 0 0 0 10016000 3357800 0 4348900 6350000 5390500 4613500 22810000 20748000 6472200 17530000 60796000 50785 1620 45592 425925;425926;425927;425928;425929;425930;425931;425932;425933;425934;425935;425936 336377;336378;336379;336380;336381;336382;336383;336384;336385;336386;336387;336388 336379 12 TDEAAFQK Unmodified 908.42396 0.42396131 1206 P26447 S100A4 Protein S100-A4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 15.799 15.942 2 0.040279 14815 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.265 66.46 355060000 0 0 0 25872000 16254000 18610000 27524000 13928000 19403000 27043000 57351000 0 47448000 48223000 53405000 50786 1206 45593 425937;425938;425939;425940;425941;425942;425943;425944;425945;425946;425947 336389;336390;336391 336389 0 TDEFPRHGSNIEAMSK Oxidation (M) 1833.8316 0.83156105 4207 Q9BWD1 ACAT2 Acetyl-CoA acetyltransferase, cytosolic yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 32.061 27.472 3 3.4887E-31 38157 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 127.22 110.72 233130000 163640000 18184000 51302000 0 0 0 0 0 0 0 0 0 0 0 0 50787 4207 45594 425948;425949;425950 336392;336393;336394;336395 336394 5683 4 TDEFPRHGSNIEAMSK Unmodified 1817.8366 0.83664643 4207 Q9BWD1 ACAT2 Acetyl-CoA acetyltransferase, cytosolic yes yes 0 0 1 By MS/MS By MS/MS 2 0 4 2 2 45.054 38.846 3;4 3.8281E-31 53826 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 127.3 110.8 430340000 411100000 0 19240000 0 0 0 0 0 0 0 0 0 0 0 0 50788 4207 45594 425951;425952;425953;425954 336396;336397;336398;336399;336400;336401;336402 336397 6 TDEGIAYR Unmodified 923.43486 0.43486035 1317 P32119 PRDX2 Peroxiredoxin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 24.746 24.144 2 0.0049623 24392 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 134.06 101.94 2362000000 0 696650000 13857000 169860000 39185000 48046000 54286000 86529000 37130000 74196000 193220000 223950000 69583000 161830000 493720000 50789 1317 45595 425955;425956;425957;425958;425959;425960;425961;425962;425963;425964;425965;425966;425967;425968;425969 336403;336404;336405;336406;336407;336408;336409;336410;336411;336412;336413;336414;336415;336416;336417;336418;336419;336420 336414 14 TDEGIAYRGLFIIDGK Unmodified 1766.9203 0.9202997 1317 P32119 PRDX2 Peroxiredoxin-2 yes yes 0 0 1 By MS/MS By MS/MS By matching 2.25 0.661 1 4 3 5 2 1 91.81 88.224 2;3 3.9073E-17 95207 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 119.54 108.89 1082600000 1008700000 72998000 881780 0 0 0 0 0 0 0 0 0 0 0 0 50790 1317 45596 425970;425971;425972;425973;425974;425975;425976;425977 336421;336422;336423;336424;336425;336426;336427 336426 7 TDEGPDTPSYNR Unmodified 1350.5688 0.56878765 2759 Q5SW79 CEP170 Centrosomal protein of 170 kDa yes yes 0 0 0 By MS/MS By matching By matching By MS/MS 10 0 4 1 1 1 1 24.121 24.415 2 0.0066093 24976 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.73 41.99 10234000 0 0 0 0 1435800 0 0 1141600 0 0 0 3913900 0 0 3742900 50791 2759 45597 425978;425979;425980;425981 336428 336428 1 TDEGVAAPVSGGAAR Unmodified 1356.6634 0.66335673 2867 Q6BDS2 UHRF1BP1 UHRF1-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.775 31.961 2 1.1817E-49 34821 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 169.52 155.9 352470000 0 0 0 17739000 23008000 26751000 25597000 26823000 25093000 29794000 35948000 53826000 27874000 26479000 33538000 50792 2867 45598 425982;425983;425984;425985;425986;425987;425988;425989;425990;425991;425992;425993 336429;336430;336431;336432;336433;336434;336435;336436;336437;336438;336439;336440;336441;336442;336443 336431 15 TDEIVALK Unmodified 887.4964 0.49639797 1118;5069 P21127;Q9UQ88 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A no no 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 49.845 45.021 2 0.018953 58658 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.754 38.396 42228000 0 40099000 2128700 0 0 0 0 0 0 0 0 0 0 0 0 50793 1118;5069 45599 425994;425995 336444 336444 1 TDELLALGR Unmodified 986.53966 0.53965977 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.285 65.373 2 1.9778E-05 74031 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 134.81 52.506 467230000 0 0 0 20516000 23961000 32620000 32242000 28345000 27067000 43378000 53013000 43603000 41015000 43663000 77804000 50794 965 45600 425996;425997;425998;425999;426000;426001;426002;426003;426004;426005;426006;426007 336445;336446;336447;336448;336449;336450;336451;336452;336453;336454;336455;336456 336452 10 TDELLALGREK Unmodified 1243.6772 0.67721588 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 2 2 2 61.985 56.179 2;3 0.00052124 69425 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 91.937 59.929 353240000 59871000 135310000 158060000 0 0 0 0 0 0 0 0 0 0 0 0 50795 965 45601 426008;426009;426010;426011;426012;426013 336457;336458;336459;336460;336461;336462;336463 336463 6 TDELRNLHK Unmodified 1124.5938 0.5938206 1365 P35659 DEK Protein DEK yes yes 0 0 1 By MS/MS By matching By MS/MS 2 0 3 1 1 1 22.697 18.762 2 0.019206 26542 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.55 68.444 62682000 48842000 7427000 6413100 0 0 0 0 0 0 0 0 0 0 0 0 50796 1365 45602 426014;426015;426016 336464 336464 0 TDEQALLSSILAK Unmodified 1387.7559 0.75586013 2883 Q6IAA8 LAMTOR1 Ragulator complex protein LAMTOR1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 87.608 87.689 2 0.0085796 101960 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.401 41.263 19113000 0 0 0 0 2474800 1617500 1919800 0 0 3639100 2117500 3905500 1484800 1953700 0 50797 2883 45603 426017;426018;426019;426020;426021;426022;426023;426024 336465;336466;336467 336467 3 TDESLDWDSSLVK Unmodified 1493.6886 0.68856843 4329 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 75.923 75.575 2 2.0498E-13 86365 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 140.07 112.75 303900000 0 116440000 0 9542400 11381000 16648000 11649000 12121000 0 22922000 24271000 20064000 17286000 17469000 24102000 50798 4329 45604 426025;426026;426027;426028;426029;426030;426031;426032;426033;426034;426035;426036;426037 336468;336469;336470;336471;336472;336473;336474;336475;336476;336477;336478;336479;336480 336476 13 TDESLFPVLK Unmodified 1147.6125 0.61249036 1238 P28715 ERCC5 DNA repair protein complementing XP-G cells yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 81.616 81.262 2 0.001394 101184 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 111.17 84.03 243960000 0 126020000 0 6818100 5480000 10637000 9127800 0 8773400 12854000 12072000 12725000 9924100 9717900 19810000 50799 1238 45605 426038;426039;426040;426041;426042;426043;426044;426045;426046;426047;426048;426049 336481;336482;336483;336484;336485;336486;336487;336488;336489;336490;336491;336492;336493 336484 13 TDETRLQK Unmodified 989.51417 0.5141733 3598 Q8WY36 BBX HMG box transcription factor BBX yes yes 0 0 1 By MS/MS By matching 2 0 2 1 1 7.6032 4.8658 2 0.041006 7331 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.22 49.992 23646000 0 13708000 9938500 0 0 0 0 0 0 0 0 0 0 0 0 50800 3598 45606 426050;426051 336494 336494 1 TDEYFRMK Unmodified 1088.4961 0.4960804 3485;4482 Q8TC07;Q9HA65 TBC1D15;TBC1D17 TBC1 domain family member 15;TBC1 domain family member 17 no no 0 0 1 By MS/MS 2 0 1 1 41.666 37.998 2 0.014842 48051 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 125.01 88.032 6771600 0 0 6771600 0 0 0 0 0 0 0 0 0 0 0 0 50801 3485;4482 45607 426052 336495 336495 1 TDEYLLAR Unmodified 979.49746 0.4974606 2021 P98082 DAB2 Disabled homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48.088 47.536 2 0.0039936 52410 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 132.29 102.95 722530000 0 85904000 3237500 29633000 22747000 41863000 36777000 31652000 36410000 60905000 63256000 66828000 45933000 58923000 138460000 50802 2021 45608 426053;426054;426055;426056;426057;426058;426059;426060;426061;426062;426063;426064;426065;426066 336496;336497;336498;336499;336500;336501;336502;336503;336504;336505;336506;336507;336508;336509 336500 13 TDFEVLTK Unmodified 951.49131 0.49131259 206 O14733 MAP2K7 Dual specificity mitogen-activated protein kinase kinase 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 54.972 54.328 2 0.011793 60534 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 113.5 93.582 308130000 0 84684000 0 11706000 13935000 16347000 15883000 16512000 14959000 21816000 24269000 24562000 19200000 17836000 26421000 50803 206 45609 426067;426068;426069;426070;426071;426072;426073;426074;426075;426076;426077;426078;426079;426080 336510;336511;336512;336513 336512 3 TDFFIGGEEGMAEK Oxidation (M) 1545.6657 0.6657245 5087 Q9Y266 NUDC Nuclear migration protein nudC yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.89 3.91 8 2 9 2 6 2 1 1 1 1 1 1 1 1 1 67.201 65.044 2 7.6685E-05 73695 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.045 74.558 1326900000 68823000 954200000 24623000 15845000 0 37469000 0 0 16695000 35498000 37493000 44389000 21279000 21404000 49219000 50804 5087 45610 426081;426082;426083;426084;426085;426086;426087;426088;426089;426090;426091;426092;426093;426094;426095;426096;426097;426098;426099 336514;336515;336516;336517;336518;336519;336520;336521;336522;336523;336524;336525;336526;336527;336528;336529;336530 336521 6486 17 TDFFIGGEEGMAEK Unmodified 1529.6708 0.67080988 5087 Q9Y266 NUDC Nuclear migration protein nudC yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 75.21 74.063 2 2.1173E-05 85653 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 87.667 70.829 1677500000 87112000 1318400000 24551000 5912200 6509700 21814000 9970200 13909000 6831700 29492000 30534000 25244000 12493000 20684000 64110000 50805 5087 45610 426100;426101;426102;426103;426104;426105;426106;426107;426108;426109;426110;426111;426112;426113;426114;426115 336531;336532;336533;336534;336535;336536;336537;336538;336539;336540;336541;336542;336543;336544;336545;336546;336547;336548 336532 18 TDFKEEPEPGFK Unmodified 1422.6667 0.66671078 1528 P47897 QARS Glutamine--tRNA ligase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 1 1 2 2 1 2 2 1 2 2 2 42.636 42.863 2;3 7.2055E-05 46830 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 115.91 100.58 506840000 0 0 0 24592000 22906000 26602000 38225000 43388000 14792000 41033000 79091000 35202000 50773000 51272000 78966000 50806 1528 45611 426116;426117;426118;426119;426120;426121;426122;426123;426124;426125;426126;426127;426128;426129;426130;426131;426132;426133;426134 336549;336550;336551;336552;336553;336554;336555;336556;336557;336558;336559;336560;336561;336562 336552 13 TDGCHAYLSK Unmodified 1150.5077 0.50770771 2055 Q01518 CAP1 Adenylyl cyclase-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.08 3.42 6 19 2 2 2 1 1 2 2 1 1 2 2 1 2 2 2 15.595 14.908 2;3 1.4146E-06 13733 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 150.81 110.54 2535400000 324710000 1782700000 147970000 13813000 5520100 14834000 12924000 8321600 5470400 22907000 33516000 17617000 21167000 35700000 88245000 50807 2055 45612 426135;426136;426137;426138;426139;426140;426141;426142;426143;426144;426145;426146;426147;426148;426149;426150;426151;426152;426153;426154;426155;426156;426157;426158;426159 336563;336564;336565;336566;336567;336568;336569;336570;336571;336572 336565 8 TDGDDTETVPSEQSHASGK Unmodified 1959.8294 0.82937202 4089 Q9BQ70 TCF25 Transcription factor 25 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.36 2.17 2 23 1 1 2 2 2 2 2 2 2 1 2 2 2 2 17.525 17.349 2;3 1.0824E-24 17547 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 103.88 99.913 299370000 3743000 13281000 0 19409000 15635000 26511000 20660000 15201000 16665000 24702000 21418000 40505000 26720000 19876000 35040000 50808 4089 45613 426160;426161;426162;426163;426164;426165;426166;426167;426168;426169;426170;426171;426172;426173;426174;426175;426176;426177;426178;426179;426180;426181;426182;426183;426184 336573;336574;336575;336576;336577;336578;336579;336580;336581;336582;336583;336584;336585;336586;336587 336582 11 TDGEPGPQGWSPR Unmodified 1382.6215 0.62149192 4429 Q9H773 DCTPP1 dCTP pyrophosphatase 1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 44.159 44.71 2 8.8091E-05 49185 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 86.014 70.754 65603000 0 0 0 0 0 0 0 0 0 0 10289000 15448000 0 12477000 27389000 50809 4429 45614 426185;426186;426187;426188 336588;336589;336590 336590 3 TDGFAEAIHSPQVAGVPR Unmodified 1850.9275 0.92751034 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.942 70.019 3 6.6772E-08 79715 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.349 78.106 353690000 0 0 0 14879000 13002000 22215000 22239000 22811000 22694000 29679000 42794000 43377000 28585000 30600000 60818000 50810 965 45615 426189;426190;426191;426192;426193;426194;426195;426196;426197;426198;426199;426200 336591;336592;336593;336594;336595;336596;336597;336598;336599;336600;336601;336602;336603;336604 336594 14 TDGFDEFK Unmodified 957.40798 0.40797689 1253 P29590 PML Protein PML yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.931 47.097 2 0.039356 52853 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 50.703 31.748 121150000 0 0 0 8953800 7768200 12092000 7642300 10374000 7835700 11040000 12013000 14601000 11071000 6671200 11085000 50811 1253 45616 426201;426202;426203;426204;426205;426206;426207;426208;426209;426210;426211;426212 336605 336605 1 TDGFGIDTCR Unmodified 1140.487 0.48697227 784 P04632 CAPNS1 Calpain small subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45.201 44.179 2 0.003478 49100 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.345 56.783 759960000 6490800 122690000 2907100 22132000 41488000 48156000 69675000 70994000 65168000 37521000 41256000 53347000 54419000 40693000 83030000 50812 784 45617 426213;426214;426215;426216;426217;426218;426219;426220;426221;426222;426223;426224;426225;426226;426227 336606;336607;336608;336609;336610;336611;336612;336613;336614;336615;336616;336617;336618;336619 336611 14 TDGFGIDTCRSMVAVMDSDTTGK Unmodified 2463.0716 0.071609678 784 P04632 CAPNS1 Calpain small subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 83.682 78.561 3 0.00039161 98923 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 56.453 46.641 69135000 27632000 34000000 7503500 0 0 0 0 0 0 0 0 0 0 0 0 50813 784 45618 426228;426229;426230 336620;336621;336622;336623 336620 4 TDGFSLDTCR Unmodified 1170.4975 0.49753696 3914 Q96L46 CAPNS2 Calpain small subunit 2 yes yes 0 0 0 By MS/MS 10 0 1 1 49.704 49.085 2 0.0040734 56029 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 74.173 58.511 13891000 0 0 0 13891000 0 0 0 0 0 0 0 0 0 0 0 50814 3914 45619 426231 336624 336624 1 TDHLSWEWNLTIK Unmodified 1641.8151 0.81510635 1689 P52565 ARHGDIA Rho GDP-dissociation inhibitor 1 yes yes 0 0 0 By MS/MS 2 0 1 1 91.787 83.657 3 0.018949 108446 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 38.178 27.133 10040000 10040000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50815 1689 45620 426232 336625 336625 1 TDIAAFVK Unmodified 863.47527 0.4752686 1505 P46734 MAP2K3 Dual specificity mitogen-activated protein kinase kinase 3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.94 61.044 2 0.02755 69097 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.281 32.649 87869000 0 0 0 5710700 4574500 8751000 5737500 7885900 5181100 8743200 7022800 10641000 6393600 6434700 10793000 50816 1505 45621 426233;426234;426235;426236;426237;426238;426239;426240;426241;426242;426243;426244 336626;336627;336628;336629;336630 336630 5 TDIFGVEETAIGK Unmodified 1378.698 0.6980109 2539 Q15459 SF3A1 Splicing factor 3A subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 78.836 78.921 2 1.5302E-07 91025 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 97.734 78.988 83414000 0 0 0 0 8638700 0 12163000 0 0 0 13316000 0 11635000 13257000 24405000 50817 2539 45622 426245;426246;426247;426248;426249;426250;426251;426252;426253 336631;336632;336633;336634;336635;336636;336637;336638;336639;336640;336641 336633 11 TDIQIALPSGCYGR Unmodified 1549.7559 0.75587691 1330 P33316 DUT Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 76.562 76.654 2 1.7614E-05 87993 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 106.67 83.063 140950000 0 0 0 0 3202400 5897200 2812400 0 0 6514000 22219000 19870000 4215600 17124000 59097000 50818 1330 45623 426254;426255;426256;426257;426258;426259;426260;426261;426262 336642;336643;336644;336645;336646;336647;336648;336649;336650 336645 9 TDISLDDPNFWQK Unmodified 1577.7362 0.73618733 4814;4517;2670;3497 Q9P2D1;Q9HCK8;Q8TD26;Q3L8U1 CHD7;CHD8;CHD6;CHD9 Chromodomain-helicase-DNA-binding protein 7;Chromodomain-helicase-DNA-binding protein 8;Chromodomain-helicase-DNA-binding protein 6;Chromodomain-helicase-DNA-binding protein 9 no no 0 0 0 By MS/MS 10 0 1 1 81.714 81.917 2 0.026837 94449 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.19 52.682 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50819 4814;4517;3497;2670 45624 426263 336651 336651 1 TDISSGRARQQDEEMLELPAPAEVAAK Unmodified 2911.4345 0.43454936 1418 P40692 MLH1 DNA mismatch repair protein Mlh1 yes yes 0 0 2 By MS/MS 2 0 1 1 77.98 75.352 4 0.011788 91479 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 23.394 17.233 5408200 0 0 5408200 0 0 0 0 0 0 0 0 0 0 0 0 50820 1418 45625 426264 336652 336652 1 TDITYPAGFMDVISIDK Unmodified 1884.9179 0.91791644 1905 P62701 RPS4X 40S ribosomal protein S4, X isoform yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 93.924 94.054 2 0.0040324 109083 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.452 49.959 3177000 0 0 0 0 0 0 0 0 0 1088200 0 0 0 0 2088900 50821 1905 45626 426265;426266 336653 336653 1 TDIVSWFGDTR Unmodified 1295.6146 0.61461563 4979 Q9UKY1 ZHX1 Zinc fingers and homeoboxes protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 83.647 83.787 2 0.0012328 96682 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.162 69.55 26713000 0 0 0 0 0 5544100 0 5117300 4753500 0 0 0 0 3616100 7682300 50822 4979 45627 426267;426268;426269;426270;426271 336654;336655;336656;336657 336655 4 TDKLDEALEDYK Unmodified 1438.6828 0.68275477 4034 Q99614 TTC1 Tetratricopeptide repeat protein 1 yes yes 0 0 1 By MS/MS 2 0 2 2 64.129 58.221 2;3 3.7947E-05 74769 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.28 115.25 104450000 0 104450000 0 0 0 0 0 0 0 0 0 0 0 0 0 50823 4034 45628 426272;426273 336658;336659 336659 2 TDKPYEDVSIINITVK Unmodified 1833.9724 0.97239485 3762 Q96BP3 PPWD1 Peptidylprolyl isomerase domain and WD repeat-containing protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 85.515 77.385 3 0.012096 100967 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 39.657 31.013 5374800 5374800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50824 3762 45629 426274 336660 336660 1 TDLDAMDIK Unmodified 1020.4798 0.47976163 3897 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 53.636 53.131 2 0.0099602 60181 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 65.224 30.972 276310000 0 61422000 0 9517800 9520600 0 13318000 14904000 0 32068000 36555000 0 22674000 25854000 50479000 50825 3897 45630 426275;426276;426277;426278;426279;426280;426281;426282;426283;426284 336661;336662;336663;336664;336665;336666;336667;336668;336669 336667 9 TDLDDDITALK Unmodified 1218.598 0.59796251 2916 Q6P1J9 CDC73 Parafibromin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 68.116 66.699 2 5.8422E-05 83774 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 135.43 113.28 437330000 32009000 172830000 0 11113000 14474000 17068000 12496000 13405000 13909000 16822000 22749000 33327000 21686000 21158000 34286000 50826 2916 45631 426285;426286;426287;426288;426289;426290;426291;426292;426293;426294;426295;426296;426297;426298;426299;426300 336670;336671;336672;336673;336674;336675;336676;336677;336678;336679;336680;336681;336682;336683;336684;336685;336686;336687 336673 18 TDLDLDGYVSGQEVK Unmodified 1637.7784 0.77844607 4836 Q9UBC2 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 73.904 73.515 2 9.633E-62 90054 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 186.27 168.21 217120000 0 77162000 0 9457300 11200000 26194000 12999000 11604000 24599000 8254900 10941000 13901000 0 0 10806000 50827 4836 45632 426301;426302;426303;426304;426305;426306;426307;426308;426309;426310;426311 336688;336689;336690;336691;336692;336693 336689 6 TDLEELNLGPR Unmodified 1255.6408 0.64083038 1712 P53367 ARFIP1 Arfaptin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 69.683 69.887 2 0.0024945 80443 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 93.111 54.089 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50828 1712 45633 426312;426313;426314;426315;426316;426317 336694;336695;336696;336697;336698;336699 336694 6 TDLEELSLGPR Unmodified 1228.6299 0.62993134 1711 P53365 ARFIP2 Arfaptin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.571 71.685 2 3.0919E-06 82449 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 143.03 107.52 99636000 0 0 0 6127600 0 7517400 7380600 6621000 5240400 9135400 9081100 11930000 10352000 7562800 18687000 50829 1711 45634 426318;426319;426320;426321;426322;426323;426324;426325;426326;426327;426328;426329 336700;336701;336702;336703;336704;336705;336706;336707;336708;336709;336710;336711 336705 11 TDLEMQIEGLK Unmodified 1275.6381 0.63805318 70;68 CON__P08779;P08779;CON__P08727;P08727 KRT16;KRT19 Keratin, type I cytoskeletal 16;Keratin, type I cytoskeletal 19 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.724 75.785 2 2.307E-05 87788 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 138.11 119.33 + 749630000 0 0 0 72049000 27529000 18283000 23496000 93912000 18589000 66673000 31244000 28065000 313940000 34453000 21396000 50830 70;68 45635 426330;426331;426332;426333;426334;426335;426336;426337;426338;426339;426340;426341 336712;336713;336714;336715;336716;336717;336718;336719;336720;336721;336722;336723 336721 10 TDLEMQIEGLK Oxidation (M) 1291.633 0.63296781 70;68 CON__P08779;P08779;CON__P08727;P08727 KRT16;KRT19 Keratin, type I cytoskeletal 16;Keratin, type I cytoskeletal 19 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 1 2 2 2 2 2 2 2 2 2 70.928 71.006 2 1.1681E-11 81805 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 156.83 137.05 + 945340000 0 0 0 116300000 32517000 16569000 64088000 85457000 20767000 88082000 32802000 44074000 391360000 32639000 20681000 50831 70;68 45635 426342;426343;426344;426345;426346;426347;426348;426349;426350;426351;426352;426353;426354;426355;426356;426357;426358;426359;426360;426361;426362;426363;426364 336724;336725;336726;336727;336728;336729;336730;336731;336732;336733;336734;336735;336736;336737;336738;336739;336740;336741;336742;336743 336727 81 20 TDLFYERK Unmodified 1070.5397 0.53965977 3067 Q7RTV0 PHF5A PHD finger-like domain-containing protein 5A yes yes 0 0 1 By MS/MS 2 0 1 1 41.236 37.626 2 0.011444 47443 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 133.6 66.256 42952000 0 0 42952000 0 0 0 0 0 0 0 0 0 0 0 0 50832 3067 45636 426365 336744 336744 0 TDLGAAAGSK Unmodified 889.45051 0.45051041 4714 Q9NX24 NHP2 H/ACA ribonucleoprotein complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.608 13.771 2 0.0077977 12320 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.593 24.5 182550000 0 0 0 9052100 11157000 10688000 9571100 9024300 9004100 17516000 20387000 22339000 22047000 13162000 28604000 50833 4714 45637 426366;426367;426368;426369;426370;426371;426372;426373;426374;426375;426376;426377 336745;336746;336747;336748;336749 336747 5 TDLLIVLSDVEGLFDSPPGSDDAK Unmodified 2502.2377 0.23773025 1749 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 0 0 0 By MS/MS 2 0 1 1 104.26 96.135 3 0.00018901 123451 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.902 43.398 8021400 8021400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50834 1749 45638 426378 336750;336751 336750 2 TDLLLEPYNK Unmodified 1204.634 0.63395408 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 4 2 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 69.858 68.532 2 8.6705E-05 86723 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.13 101.19 7195200000 73544000 2316700000 36089000 258090000 362850000 400540000 387960000 333750000 286790000 427800000 466020000 630980000 393920000 322140000 498000000 50835 1356 45639 426379;426380;426381;426382;426383;426384;426385;426386;426387;426388;426389;426390;426391;426392;426393;426394;426395;426396 336752;336753;336754;336755;336756;336757;336758;336759;336760;336761;336762;336763;336764;336765;336766;336767;336768;336769;336770;336771;336772;336773;336774;336775;336776;336777 336757 25 TDLLQVLLK Unmodified 1041.6434 0.64339656 4447 Q9H892 TTC12 Tetratricopeptide repeat protein 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 93.164 93.302 2 0.029484 108478 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 48.561 8.2929 4531600 0 0 0 0 0 492020 346320 496060 735250 950760 0 0 0 0 1511200 50836 4447 45640 426397;426398;426399;426400;426401;426402 336778;336779 336778 2 TDLLVNDNPDPAPLSPELQDFK Unmodified 2437.2013 0.20128517 4900 Q9UHF7 TRPS1 Zinc finger transcription factor Trps1 yes yes 0 0 0 By MS/MS 10 0 1 1 88.023 88.173 3 0.0058252 102020 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 26.84 19.218 4885800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4885800 50837 4900 45641 426403 336780 336780 1 TDLNPDNLQGGDDLDPNYVLSSR Unmodified 2517.1619 0.16193955 967 P12277 CKB Creatine kinase B-type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.71 3.81 2 1 4 1 2 1 1 1 1 83.11 80.9 3 3.1367E-34 94756 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 102.94 95.227 283830000 13957000 152830000 0 0 0 0 0 0 0 0 20801000 15495000 0 10697000 70050000 50838 967 45642 426404;426405;426406;426407;426408;426409;426410 336781;336782;336783;336784;336785;336786;336787 336782 7 TDLPEEKPDATPQNPFLK Unmodified 2039.0211 0.021135958 10 A1X283 SH3PXD2B SH3 and PX domain-containing protein 2B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 71.502 70.598 3 0.0062142 80983 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 32.387 24.524 199110000 8162700 0 4961000 0 15477000 17202000 0 18552000 21514000 23543000 22941000 26622000 14554000 0 25585000 50839 10 45643 426411;426412;426413;426414;426415;426416;426417;426418;426419;426420;426421 336788;336789;336790 336788 3 TDLQGSASPSK Unmodified 1089.5302 0.5302173 2988 Q6VY07 PACS1 Phosphofurin acidic cluster sorting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.878 13.034 2 0.00053665 11729 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.029 58.26 128520000 0 0 0 11676000 7121300 12229000 9853000 6544100 7524300 11097000 12403000 18528000 10545000 6752300 14246000 50840 2988 45644 426422;426423;426424;426425;426426;426427;426428;426429;426430;426431;426432;426433 336791;336792;336793;336794;336795;336796;336797;336798;336799;336800 336793 7 TDLTDLMASEPDELR Oxidation (M) 1720.7825 0.78254517 5361 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 72.208 72.249 2 0.020232 83718 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 43.77 25.697 + 122940000 0 0 0 9598900 9738600 9505800 9188600 17758000 10931000 12115000 10557000 13434000 9498700 10613000 0 50841 5361 45645 426434;426435;426436;426437;426438;426439;426440;426441;426442;426443;426444 336801 336801 6746 0 TDLTNGEHARSDSGK Unmodified 1586.7285 0.72847619 5276 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 9.2289 6.4788 3 8.0796E-23 8529 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 112.72 106.34 14879000 0 6912000 7967400 0 0 0 0 0 0 0 0 0 0 0 0 50842 5276 45646 426445;426446 336802;336803;336804;336805 336804 4 TDLVAVWDVALSDGVHK Acetyl (Protein N-term) 1865.9523 0.95232811 4677 Q9NVQ4 FAIM Fas apoptotic inhibitory molecule 1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 2 3 1 101 96.509 2 1.4913E-46 120107 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 165.7 152.27 61906000 19264000 40901000 1740800 0 0 0 0 0 0 0 0 0 0 0 0 50843 4677 45647 426447;426448;426449;426450;426451;426452 336806;336807;336808;336809;336810;336811 336810 5 TDLVPAFQNLMK Oxidation (M) 1391.7119 0.71188683 1271 P30153 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 79.844 79.262 2 1.8826E-05 92027 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 98.582 84.464 1516800000 0 754900000 0 47489000 0 0 37783000 50757000 36929000 114020000 99853000 145770000 60495000 61090000 107670000 50844 1271 45648 426453;426454;426455;426456;426457;426458;426459;426460;426461;426462;426463;426464 336812;336813;336814;336815;336816;336817;336818;336819 336819 1879 3 TDLVPAFQNLMK Unmodified 1375.717 0.71697221 1271 P30153 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.86 3.4 1 1 5 2 1 1 1 1 1 89.469 88.414 2 0.0047986 110254 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.936 73.563 923670000 0 830150000 0 0 0 0 0 7955800 6168600 0 0 0 4850400 13167000 61378000 50845 1271 45648 426465;426466;426467;426468;426469;426470;426471 336820;336821;336822;336823;336824;336825 336820 5 TDLYHLQK Unmodified 1016.5291 0.52909508 4837 Q9UBD5 ORC3 Origin recognition complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 34.515 34.708 2 0.0075889 38292 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 89.123 59.813 180960000 0 0 0 0 7069600 16774000 0 9762400 9489500 17813000 56953000 39946000 23154000 0 0 50846 4837 45649 426472;426473;426474;426475;426476;426477;426478;426479 336826;336827;336828;336829 336827 4 TDMDNQIVVSDYAQMDR 2 Oxidation (M) 2031.8514 0.85136979 1642 P50991 CCT4 T-complex protein 1 subunit delta yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 2 2 2 1 2 2 2 1 1 2 55.938 56.053 2;3 2.9055E-71 63384 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 176.25 163.05 597530000 0 0 0 44158000 37005000 62799000 57524000 41076000 24166000 60232000 61593000 71649000 35372000 30408000 71551000 50847 1642 45650 426480;426481;426482;426483;426484;426485;426486;426487;426488;426489;426490;426491;426492;426493;426494;426495;426496;426497;426498;426499;426500 336830;336831;336832;336833;336834;336835;336836;336837;336838;336839;336840;336841;336842;336843;336844 336842 2648;2649 12 TDMDNQIVVSDYAQMDR Oxidation (M) 2015.8565 0.85645517 1642 P50991 CCT4 T-complex protein 1 subunit delta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 65.761 65.881 2 1.0222E-127 76907 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 204.13 180.28 322720000 0 0 0 6442600 16402000 37348000 18647000 19479000 14289000 36153000 35634000 37410000 24507000 26068000 50337000 50848 1642 45650 426501;426502;426503;426504;426505;426506;426507;426508;426509;426510;426511;426512;426513;426514;426515;426516;426517;426518;426519;426520;426521;426522;426523;426524 336845;336846;336847;336848;336849;336850;336851;336852;336853;336854;336855;336856;336857;336858;336859;336860;336861;336862;336863;336864;336865;336866;336867;336868;336869;336870;336871;336872;336873;336874 336853 2648;2649 30 TDMDNQIVVSDYAQMDR Unmodified 1999.8615 0.86154055 1642 P50991 CCT4 T-complex protein 1 subunit delta yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 73.99 74.156 2 1.0388E-46 85323 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 157.56 143.4 91140000 0 0 0 0 0 11917000 2780500 6550800 3838100 8765900 10279000 7483100 2805200 6794100 29926000 50849 1642 45650 426525;426526;426527;426528;426529;426530;426531;426532;426533;426534 336875;336876;336877;336878;336879;336880;336881;336882;336883 336875 9 TDMDQIITSK Oxidation (M) 1166.5489 0.54890383 4003 Q96TA1 FAM129B Niban-like protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 1 2 1 2 1 2 1 2 1 1 1 27.677 27.821 2 0.0060462 29653 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 58.246 42.604 74403000 0 0 0 2368900 4392800 16841000 4676500 7186300 4133900 14944000 6573000 6016900 3562900 3707500 0 50850 4003 45651 426535;426536;426537;426538;426539;426540;426541;426542;426543;426544;426545;426546;426547;426548;426549;426550 336884;336885;336886;336887;336888;336889;336890;336891 336886 5482 7 TDMDQIITSK Unmodified 1150.554 0.5539892 4003 Q96TA1 FAM129B Niban-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 2 1 51.101 51.169 2 0.005164 57683 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 70.056 46.263 45671000 0 0 0 0 0 45671000 0 0 0 0 0 0 0 0 0 50851 4003 45651 426551;426552;426553;426554;426555;426556;426557 336892;336893;336894;336895;336896;336897;336898;336899 336892 8 TDMELEVLRYTNK Oxidation (M) 1626.7923 0.792322 972 P12955 PEPD Xaa-Pro dipeptidase yes yes 0 1 1 By MS/MS 3 0 1 1 68.059 63.374 3 0.00091899 77621 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 85.554 79.839 6954000 0 6954000 0 0 0 0 0 0 0 0 0 0 0 0 0 50852 972 45652 426558 336900 336900 1289 1 TDMELEVLRYTNK Unmodified 1610.7974 0.79740737 972 P12955 PEPD Xaa-Pro dipeptidase yes yes 0 0 1 By MS/MS 2 0 1 1 81.219 73.089 3 2.4566E-06 95816 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.163 80.961 18506000 18506000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50853 972 45652 426559 336901 336901 1 TDNAGDQHGGGGGGGGGAGAAGGGGGGENYDDPHK Unmodified 2980.1953 0.19525838 1008 P14866 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 6 22 2 2 2 1 2 2 2 2 1 2 2 2 2 2 2 15.157 14.571 3;4 2.8815E-126 14244 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 95.042 94.935 912550000 48772000 160980000 7285700 20212000 26845000 35623000 39305000 32770000 28013000 60858000 66632000 50935000 62218000 60979000 211120000 50854 1008 45653 426560;426561;426562;426563;426564;426565;426566;426567;426568;426569;426570;426571;426572;426573;426574;426575;426576;426577;426578;426579;426580;426581;426582;426583;426584;426585;426586;426587 336902;336903;336904;336905;336906;336907;336908;336909;336910;336911;336912;336913;336914;336915;336916;336917;336918;336919;336920;336921;336922;336923;336924 336902 23 TDNTEVLLSADFTGAIK Unmodified 1793.9047 0.90470922 2734 Q5JSH3 WDR44 WD repeat-containing protein 44 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.29 0.452 5 2 2 4 1 90.105 85.581 2 7.7032E-08 110301 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.41 82.038 91265000 27167000 54946000 9151500 0 0 0 0 0 0 0 0 0 0 0 0 50855 2734 45654 426588;426589;426590;426591;426592;426593;426594 336925;336926;336927;336928;336929;336930;336931;336932;336933 336927 9 TDNTLNQR Unmodified 960.46247 0.46247208 4960 Q9UKA9 PTBP2 Polypyrimidine tract-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 7.4228 7.4795 2 0.016731 5669 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 66.799 37.901 6672900 0 0 0 0 824530 1870800 1519100 1859100 0 0 0 0 0 599300 0 50856 4960 45655 426595;426596;426597;426598;426599 336934 336934 1 TDNVEVTDGENK Unmodified 1319.5841 0.58410336 3631 Q92576 PHF3 PHD finger protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 17.918 18.106 2 5.9179E-06 18598 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 129.89 115.22 134520000 0 0 0 9485000 8903900 8572000 9709500 8558400 11433000 11690000 12884000 18184000 11838000 9933500 13331000 50857 3631 45656 426600;426601;426602;426603;426604;426605;426606;426607;426608;426609;426610;426611 336935;336936;336937;336938;336939;336940;336941;336942;336943;336944 336944 10 TDPENTDYTMEHGATR Oxidation (M) 1852.7534 0.75337031 4205 Q9BW85 CCDC94 Coiled-coil domain-containing protein 94 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 21.276 21.512 3 0.0011533 22449 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 43.861 39.957 31287000 0 0 0 3482400 0 4784000 0 4802600 3346500 0 0 8816600 0 0 6054800 50858 4205 45657 426612;426613;426614;426615;426616;426617 336945 336945 5681 1 TDPENTDYTMEHGATR Unmodified 1836.7585 0.75845568 4205 Q9BW85 CCDC94 Coiled-coil domain-containing protein 94 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 2 1 2 29.448 29.903 2;3 1.7493E-08 31308 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.446 68.543 74514000 0 0 0 0 0 6429900 0 0 0 9340700 16899000 13631000 0 0 28214000 50859 4205 45657 426618;426619;426620;426621;426622;426623;426624 336946;336947;336948;336949;336950;336951;336952 336949 7 TDPGTATNHQGLPAVDSEILEMPPEK Oxidation (M) 2762.3069 0.30688923 598 O94888 UBXN7 UBX domain-containing protein 7 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 75.313 75.49 3 6.8925E-10 86602 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 51.398 43.952 83407000 0 0 0 0 0 13330000 0 11206000 10501000 0 0 21761000 0 0 26608000 50860 598 45658 426625;426626;426627;426628;426629 336953;336954;336955;336956;336957 336955 747 5 TDPGTVFVMNK Oxidation (M) 1223.5856 0.58562368 4744 Q9NYK5 MRPL39 39S ribosomal protein L39, mitochondrial yes yes 0 1 0 By MS/MS 2 0 1 1 49.954 44.247 2 0.0090103 57562 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.299 44.851 10977000 0 10977000 0 0 0 0 0 0 0 0 0 0 0 0 0 50861 4744 45659 426630 336958 336958 6119 1 TDPIPIVVK Unmodified 980.59063 0.59063271 4968 Q9UKJ3 GPATCH8 G patch domain-containing protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.127 69.205 2 0.047017 79319 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 42.835 15.971 129440000 0 0 0 6915000 6494000 9015900 10650000 10961000 7965100 10858000 13999000 15068000 9453300 11709000 16356000 50862 4968 45660 426631;426632;426633;426634;426635;426636;426637;426638;426639;426640;426641;426642 336959 336959 1 TDPPDGQQDSECNR Unmodified 1617.6325 0.63252689 4652 Q9NUQ3 TXLNG Gamma-taxilin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 10.836 10.953 2 0.027312 9015 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.946 32.946 16425000 0 0 0 1002300 641490 1390700 1476200 740340 699420 1169800 0 2429600 1629100 1723700 3522700 50863 4652 45661 426643;426644;426645;426646;426647;426648;426649;426650;426651;426652;426653 336960;336961 336960 2 TDPSEQVEGNCEIVNELIAASTQK Unmodified 2631.2334 0.23338993 3427 Q8NEM2 SHCBP1 SHC SH2 domain-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 92.217 92.344 3 5.071E-08 107009 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.576 33.643 7541800 0 0 0 0 0 0 0 0 0 2819900 0 0 0 0 4721900 50864 3427 45662 426654;426655 336962;336963 336963 2 TDPSSLGATSASFNFGK Unmodified 1685.7897 0.78967946 4978 Q9UKX7 NUP50 Nuclear pore complex protein Nup50 yes yes 0 0 0 By MS/MS 2 0 1 1 77.02 72.182 2 8.199E-09 90101 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 137.88 128.23 49783000 0 49783000 0 0 0 0 0 0 0 0 0 0 0 0 0 50865 4978 45663 426656 336964 336964 1 TDPTTLTDEEINR Unmodified 1503.7053 0.70528113 953 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 50.468 50.622 2 9.8406E-16 56156 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 184.71 164.4 588280000 0 0 0 43256000 35232000 55413000 47279000 40268000 33174000 54100000 54719000 59137000 38445000 45870000 81389000 50866 953 45664 426657;426658;426659;426660;426661;426662;426663;426664;426665;426666;426667;426668 336965;336966;336967;336968;336969;336970;336971;336972;336973;336974;336975;336976 336972 12 TDPTTLTDEEINRFAR Unmodified 1877.9119 0.91191986 953 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 75.626 75.67 3 0.00664 87225 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 37.092 26.811 142730000 0 0 0 2894400 5067200 13423000 8707600 16974000 12192000 16499000 0 19063000 8335500 7984000 31589000 50867 953 45665 426669;426670;426671;426672;426673;426674;426675;426676;426677;426678;426679 336977;336978;336979;336980;336981 336980 4 TDPVDIYK Unmodified 949.47566 0.47566253 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 43.601 43.298 1;2 0.030437 47895 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.531 41.859 2427000000 0 62500000 0 4057200 155880000 291560000 174170000 0 167920000 260970000 271740000 366070000 196410000 165030000 310660000 50868 1518 45666 426680;426681;426682;426683;426684;426685;426686;426687;426688;426689;426690;426691 336982;336983;336984;336985 336985 3 TDPVPEEGEDVAATISATETLSEEEQEELRR Unmodified 3429.5907 0.59071146 1768 P55327 TPD52 Tumor protein D52 yes yes 0 0 1 By MS/MS 10 0 1 1 89.733 89.392 3 0.02252 103970 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 15.399 13.493 2548800 0 0 0 2548800 0 0 0 0 0 0 0 0 0 0 0 50869 1768 45667 426692 336986 336986 1 TDPVPEEGEDVAATISATETLSEEEQEELRRELAK Unmodified 3870.8494 0.84944535 1768 P55327 TPD52 Tumor protein D52 yes yes 0 0 2 By MS/MS 2 0 1 1 97.403 89.272 4 2.7162E-42 115286 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.129 85.314 35624000 35624000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50870 1768 45668 426693 336987;336988 336987 2 TDQAFVTLTTNDAYAK Acetyl (Protein N-term) 1799.8578 0.85775902 1519 P46976 GYG1 Glycogenin-1 yes yes 1 0 0 By MS/MS 1 0 1 1 104.33 105.23 2 0.00017978 96878 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 109.15 88.368 6134400 0 6134400 0 0 0 0 0 0 0 0 0 0 0 0 0 50871 1519 45669 426694 336989 336989 1 TDQAQDVK Unmodified 903.42977 0.42977497 1576 P49458 SRP9 Signal recognition particle 9 kDa protein yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 3.0427 -0.29126 2 0.012119 4270 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.6 78.025 15297000 9400500 5896800 0 0 0 0 0 0 0 0 0 0 0 0 0 50872 1576 45670 426695;426696;426697 336990;336991;336992;336993 336993 4 TDQDSVIGVSPAVMIR Oxidation (M) 1702.856 0.85598488 3590 Q8WXG6 MADD MAP kinase-activating death domain protein yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 74.358 74.477 2 5.6651E-05 85868 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 75.479 67.415 37899000 0 0 0 0 4695700 0 4524400 0 0 0 4168700 7033700 6086000 5433700 5957300 50873 3590 45671 426698;426699;426700;426701;426702;426703;426704 336994;336995;336996;336997;336998 336998 5088 4 TDQDSVIGVSPAVMIR Unmodified 1686.8611 0.86107026 3590 Q8WXG6 MADD MAP kinase-activating death domain protein yes yes 0 0 0 By MS/MS 10 0 1 1 81.316 81.531 2 0.045095 93886 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 27.967 13.276 10450000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10450000 50874 3590 45671 426705 336999 336999 1 TDQFPLFLIIMGK Oxidation (M) 1537.8214 0.82143728 5037 Q9UNN5 FAF1 FAS-associated factor 1 yes yes 0 1 0 By MS/MS 10 0 1 1 97.96 98.132 2 0.0027354 113881 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.092 34.838 1580000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1580000 50875 5037 45672 426706 337000 337000 6387 1 TDQLVSFLR Unmodified 1077.5819 0.58185893 5051 Q9UPN7 PPP6R1 Serine/threonine-protein phosphatase 6 regulatory subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 78.556 78.635 2 0.0050999 90335 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.623 35.34 54531000 0 0 0 3093900 0 6143800 4041900 4505500 3891800 5251100 0 5372600 5591800 5943900 10695000 50876 5051 45673 426707;426708;426709;426710;426711;426712;426713;426714;426715;426716 337001;337002;337003;337004;337005;337006;337007 337004 7 TDQVIQSLIALVNDPQPEHPLRADLAEEYSK Unmodified 3488.7787 0.77872743 1959 P68036 UBE2L3 Ubiquitin-conjugating enzyme E2 L3 yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 98.656 92.936 4 5.5969E-58 117425 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 111.82 109.83 29433000 21786000 7646900 0 0 0 0 0 0 0 0 0 0 0 0 0 50877 1959 45674 426717;426718 337008;337009 337009 2 TDRGGDSIGETPTPGASK Unmodified 1744.8228 0.8227705 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 16 2 1 1 1 2 1 2 1 2 2 1 25.564 25.77 2;3 6.1392E-10 27204 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 114.56 84.756 492500000 0 0 0 0 34962000 40558000 34860000 25481000 39571000 44743000 48761000 40380000 68059000 100210000 14911000 50878 516 45675 426719;426720;426721;426722;426723;426724;426725;426726;426727;426728;426729;426730;426731;426732;426733;426734 337010;337011;337012;337013;337014;337015;337016;337017;337018;337019;337020;337021;337022;337023;337024;337025;337026;337027;337028;337029;337030 337018 20 TDRTEEWYGTQYK Unmodified 1675.7478 0.74781464 1006 P14735 IDE Insulin-degrading enzyme yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 6.08 3.93 5 1 6 1 3 2 1 1 1 1 1 1 45.156 42.573 2;3 0.0010419 53524 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 91.62 81.244 226400000 6536800 97667000 42053000 34125000 2654200 0 0 3884600 0 0 12190000 0 0 8502700 18788000 50879 1006 45676 426735;426736;426737;426738;426739;426740;426741;426742;426743;426744;426745;426746 337031;337032;337033;337034;337035;337036;337037;337038 337035 7 TDRVLGTAQLK Unmodified 1200.6826 0.68263561 2921 Q6P1N0 CC2D1A Coiled-coil and C2 domain-containing protein 1A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 29.779 28.673 3 0.0066787 26888 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 39.625 27.046 340870000 86391000 0 8158300 0 22530000 2834800 51563000 0 0 0 55978000 4109000 0 0 109310000 50880 2921 45677 426747;426748;426749;426750;426751;426752;426753;426754 337039;337040;337041;337042;337043 337043 5 TDRYTIHSQLEHLQSK Acetyl (Protein N-term) 1996.9967 0.99665254 4212 Q9BWJ5 SF3B5 Splicing factor 3B subunit 5 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 2 1 1 1 1 1 1 2 1 2 1 57.889 56.501 3;4 8.484E-28 63238 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 131.45 119.81 366820000 106680000 36914000 0 0 0 12071000 8553600 14968000 10127000 12330000 0 56244000 11397000 38228000 59308000 50881 4212 45678 426755;426756;426757;426758;426759;426760;426761;426762;426763;426764;426765;426766;426767;426768 337044;337045;337046;337047;337048;337049;337050;337051;337052;337053;337054;337055;337056;337057;337058;337059;337060;337061 337061 16 TDSAPDQQVETGK Unmodified 1374.6263 0.62630252 2776 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.809 15.999 2 9.2285E-13 15103 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 132.25 125.96 71014000 0 0 0 3540600 3403700 6146100 0 3810100 0 7292400 10073000 9935600 8308600 7576300 10928000 50882 2776 45679 426769;426770;426771;426772;426773;426774;426775;426776;426777;426778;426779;426780 337062;337063;337064;337065;337066;337067;337068;337069;337070;337071;337072 337066 11 TDSCDVNDCVQQVVELLQERDIVPVDASYEVK Unmodified 3721.7451 0.74512039 310 O43252 PAPSS1 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes yes 0 0 1 By MS/MS 2 0 2 2 99.515 91.385 3;4 3.5712E-91 117612 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 127.23 125.62 25391000 25391000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50883 310 45680 426781;426782 337073;337074 337073 1 TDSDEEVAMLLDTVQK Unmodified 1792.8401 0.84006005 3194 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 yes yes 0 0 0 By MS/MS 2 0 2 2 93.429 88.518 2;3 2.0974E-11 109901 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.663 71.384 39981000 0 39981000 0 0 0 0 0 0 0 0 0 0 0 0 0 50884 3194 45681 426783;426784 337075;337076 337075 1 TDSDIIAK Unmodified 861.44436 0.4443624 877 P09012 SNRPA U1 small nuclear ribonucleoprotein A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 21.424 21.628 2 0.011282 22316 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 77.282 25.495 1375800000 0 0 0 68506000 65572000 96468000 115040000 74496000 78432000 130810000 141690000 149940000 110280000 125650000 218960000 50885 877 45682 426785;426786;426787;426788;426789;426790;426791;426792;426793;426794;426795;426796;426797;426798;426799;426800;426801;426802;426803;426804;426805;426806;426807;426808 337077;337078;337079;337080;337081;337082;337083;337084 337080 8 TDSDIISK Unmodified 877.43928 0.43927702 866 P08579 SNRPB2 U2 small nuclear ribonucleoprotein B'' yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 19.772 19.986 2 0.013883 20291 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 71.379 43.273 358090000 0 0 0 17675000 26291000 0 30723000 22223000 23145000 33794000 42767000 56771000 0 45556000 59142000 50886 866 45683 426809;426810;426811;426812;426813;426814;426815;426816;426817;426818;426819 337085;337086;337087;337088;337089;337090;337091 337086 7 TDSDSDLQLYK Unmodified 1283.5881 0.5881261 2053 Q01433 AMPD2 AMP deaminase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.8 3.92 2 3 1 1 1 1 1 47.913 45.465 2 0.0017462 51191 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.908 50.579 60161000 6259600 23411000 0 0 0 0 0 0 0 0 10374000 0 0 6015100 14101000 50887 2053 45684 426820;426821;426822;426823;426824 337092;337093;337094;337095 337093 3 TDSINILADVLPEEMPTTVLQSMK Unmodified 2644.334 0.3339556 2806 Q5VSL9 STRIP1 Striatin-interacting protein 1 yes yes 0 0 0 By MS/MS 2 0 2 2 101.36 96.647 2;3 1.2314E-14 119455 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.42 115.82 25899000 0 25899000 0 0 0 0 0 0 0 0 0 0 0 0 0 50888 2806 45685 426825;426826 337096;337097 337097 2 TDSLAATPPAAK Unmodified 1141.5979 0.59790293 5203 Q9Y4H2 IRS2 Insulin receptor substrate 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 31.504 31.662 2 0.0024486 33939 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 79.489 65.486 42703000 0 0 0 0 5663600 0 9486500 0 7287100 0 0 13058000 0 7207300 0 50889 5203 45686 426827;426828;426829;426830;426831 337098;337099;337100;337101 337100 4 TDSLVLTTLK Unmodified 1089.6281 0.62814043 2185 Q12772 SREBF2 Sterol regulatory element-binding protein 2;Processed sterol regulatory element-binding protein 2 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 69.603 69.897 2 0.011466 80779 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 54.191 38.82 5244300 0 0 0 0 0 0 0 0 0 0 0 0 2061300 0 3183000 50890 2185 45687 426832;426833 337102 337102 1 TDSPDMHEDT Unmodified 1146.4135 0.41353256 4201 Q9BW61 DDA1 DET1- and DDB1-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 15.137 15.33 2 0.02315 14460 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 45.68 38.529 36725000 0 0 0 2401100 1322200 0 1806900 1069100 0 2565300 4398300 4505700 4256500 5496100 8903900 50891 4201 45688 426834;426835;426836;426837;426838;426839;426840;426841;426842;426843 337103;337104;337105;337106 337104 4 TDSQDLVASFR Unmodified 1237.5939 0.59388018 2514 Q15291 RBBP5 Retinoblastoma-binding protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.579 62.675 2 2.5397E-05 71959 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 140.16 66.904 219840000 0 0 0 10138000 12360000 13955000 14148000 20328000 10179000 17846000 24459000 22608000 20672000 19988000 33155000 50892 2514 45689 426844;426845;426846;426847;426848;426849;426850;426851;426852;426853;426854;426855 337107;337108;337109;337110;337111;337112;337113;337114;337115;337116;337117 337114 11 TDSQLQGQVLFR Unmodified 1390.7205 0.72047768 4641 Q9NU22 MDN1 Midasin yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 65.836 65.989 2 5.5431E-05 74653 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 90.108 77.152 31855000 0 0 0 0 2279500 2771500 0 0 0 2970800 3330400 4543800 3795000 4885400 7278500 50893 4641 45690 426856;426857;426858;426859;426860;426861;426862;426863 337118;337119;337120;337121 337119 4 TDSSASNSNSELK Unmodified 1338.5899 0.58991702 3061 Q7LBC6 KDM3B Lysine-specific demethylase 3B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 8.516 8.6249 2 8.7395E-12 6866 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 122.69 75.504 1818900000 0 0 0 552040000 96667000 7695600 10244000 160680000 52288000 84308000 0 537600000 189410000 60657000 67351000 50894 3061 45691 426864;426865;426866;426867;426868;426869;426870;426871;426872;426873;426874 337122;337123;337124;337125;337126 337126 4 TDSVIIADQTPTPTR Unmodified 1613.8261 0.82606496 1055 P17544 ATF7 Cyclic AMP-dependent transcription factor ATF-7 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 55.616 55.438 2 0.00070334 63140 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 78.692 69.37 76866000 0 0 0 0 39548000 0 0 0 37318000 0 0 0 0 0 0 50895 1055 45692 426875;426876 337127 337127 1 TDSYFNPK Unmodified 970.43961 0.43961137 3072 Q7Z2T5 TRMT1L TRMT1-like protein yes yes 0 0 0 By MS/MS 2 0 1 1 36.684 31.769 2 0.032 41595 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.1 104.09 44587000 0 44587000 0 0 0 0 0 0 0 0 0 0 0 0 0 50896 3072 45693 426877 337128 337128 0 TDTDLYEFAK Unmodified 1201.5503 0.55028404 3762 Q96BP3 PPWD1 Peptidylprolyl isomerase domain and WD repeat-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 68.088 60.982 2 0.032308 78407 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.692 60.439 158210000 5436600 152770000 0 0 0 0 0 0 0 0 0 0 0 0 0 50897 3762 45694 426878;426879 337129 337129 0 TDTESELDLISR Unmodified 1377.6624 0.66235368 953 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 68.051 67.726 2 2.4387E-05 76749 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 120.06 92.758 585440000 0 53387000 0 0 25855000 39353000 40323000 65939000 28233000 52863000 55105000 63772000 36395000 41861000 82351000 50898 953 45695 426880;426881;426882;426883;426884;426885;426886;426887;426888;426889;426890;426891 337130;337131;337132;337133;337134;337135;337136;337137;337138;337139;337140 337134 11 TDTESELDLISRLSREHGAFDAVK Unmodified 2688.3355 0.33548724 953 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 0 0 2 By MS/MS 2 0 3 3 91.233 83.103 3;4;5 2.0214E-07 107766 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.369 47.478 166470000 166470000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50899 953 45696 426892;426893;426894 337141;337142;337143;337144 337143 4 TDTGEPMGR Oxidation (M) 978.40766 0.40765932 850 P07900 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 26 1 2 3 1 2 2 3 1 3 2 3 3 6.0729 6.207 2 0.0021521 3371 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.143 88.158 746210000 0 0 0 27367000 25152000 72322000 49925000 32398000 30358000 80256000 89104000 64303000 60617000 76190000 138220000 50900 850 45697 426895;426896;426897;426898;426899;426900;426901;426902;426903;426904;426905;426906;426907;426908;426909;426910;426911;426912;426913;426914;426915;426916;426917;426918;426919;426920 337145;337146;337147;337148;337149;337150;337151;337152;337153;337154;337155;337156 337148 1070 12 TDTGEPMGR Unmodified 962.41274 0.4127447 850 P07900 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 11.754 11.904 2 4.3467E-20 10100 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 173.23 132.97 1213500000 0 0 0 46093000 39221000 111850000 54573000 76708000 45080000 120000000 98204000 128890000 91643000 100030000 301190000 50901 850 45697 426921;426922;426923;426924;426925;426926;426927;426928;426929;426930;426931;426932 337157;337158;337159;337160;337161;337162;337163;337164;337165;337166;337167;337168;337169;337170 337163 9 TDTGEPMGRGTK Unmodified 1248.5768 0.57684991 850 P07900 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 0 0 1 By MS/MS 2 0 1 1 11.179 7.3062 2 0.029021 11689 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.886 70.615 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50902 850 45698 426933 337171 337171 1 TDTGIVTVEQSPSSSK Unmodified 1634.7999 0.79990979 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 41.908 42.085 2 1.5545E-35 46477 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 194.39 180.59 204750000 0 0 0 16265000 12926000 9428400 15033000 17220000 14029000 16634000 20986000 26356000 18696000 14708000 22466000 50903 3443 45699 426934;426935;426936;426937;426938;426939;426940;426941;426942;426943;426944;426945;426946 337172;337173;337174;337175;337176;337177;337178;337179;337180;337181;337182;337183;337184 337182 13 TDTLEDLFPTTK Unmodified 1379.682 0.68202649 974 P13010 XRCC5 X-ray repair cross-complementing protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.45 3.89 8 2 12 3 5 2 1 1 1 1 1 1 1 1 1 1 1 1 82.955 81.888 2 5.8661E-55 95259 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 190.86 159.79 6269500000 220400000 5225400000 41879000 22501000 32390000 50397000 36185000 39678000 31977000 74334000 84417000 100570000 51927000 74021000 183400000 50904 974 45700 426947;426948;426949;426950;426951;426952;426953;426954;426955;426956;426957;426958;426959;426960;426961;426962;426963;426964;426965;426966;426967;426968 337185;337186;337187;337188;337189;337190;337191;337192;337193;337194;337195;337196;337197;337198;337199;337200;337201;337202;337203;337204;337205;337206;337207;337208 337206 22 TDTPAPPTHALSQSPAEADGSVAFVPGEAQVAR Unmodified 3273.5902 0.59019837 2763 Q5SXM2 SNAPC4 snRNA-activating protein complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.159 77.216 3 2.2382E-65 89281 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 96.068 91.09 163120000 0 0 0 3432000 11290000 13779000 10639000 11888000 11691000 19742000 13507000 23827000 8539200 13642000 21143000 50905 2763 45701 426969;426970;426971;426972;426973;426974;426975;426976;426977;426978;426979;426980 337209;337210;337211;337212;337213;337214;337215;337216;337217;337218;337219 337218 11 TDTPPSSVPTSVISTPSTEEIQSETPGDAQGSPPELK Unmodified 3765.7956 0.79561886 2235 Q13112 CHAF1B Chromatin assembly factor 1 subunit B yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 80.813 80.822 3 0.038034 93427 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 12.68 8.8689 11774000 0 0 0 0 3912500 0 0 0 0 4795100 3066100 0 0 0 0 50906 2235 45702 426981;426982;426983 337220 337220 1 TDTSPVLETAGTVAAMAATPSAR Unmodified 2217.0947 0.094711606 3572 Q8WWH5 TRUB1 Probable tRNA pseudouridine synthase 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 87.306 87.471 3 0.0013326 101171 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 31.176 27.069 10795000 0 0 0 0 0 0 0 2053300 0 0 2378500 0 0 1492700 4870800 50907 3572 45703 426984;426985;426986;426987 337221 337221 1 TDTVLILCR Unmodified 1089.5852 0.58522975 4497 Q9HB71 CACYBP Calcyclin-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.735 66.82 2 1.5482E-08 76404 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 159.2 111.45 222190000 0 0 0 7109100 6589900 30329000 10996000 6548000 8385900 24820000 21143000 30810000 14911000 21598000 38949000 50908 4497 45704 426988;426989;426990;426991;426992;426993;426994;426995;426996;426997;426998;426999 337222;337223;337224;337225;337226;337227;337228;337229;337230;337231;337232;337233 337227 12 TDTVLILCRK Unmodified 1217.6802 0.68019277 4497 Q9HB71 CACYBP Calcyclin-binding protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 3 24 2 1 2 2 2 2 2 2 2 2 2 2 2 2 53.251 52.627 2;3 3.7053E-10 74598 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 171.73 146.6 532820000 90357000 0 14762000 15195000 9981600 45314000 25042000 17210000 18804000 42942000 41675000 56047000 31814000 42345000 81329000 50909 4497 45705 427000;427001;427002;427003;427004;427005;427006;427007;427008;427009;427010;427011;427012;427013;427014;427015;427016;427017;427018;427019;427020;427021;427022;427023;427024;427025;427026 337234;337235;337236;337237;337238;337239;337240;337241;337242;337243;337244;337245;337246;337247;337248;337249;337250;337251;337252;337253;337254;337255 337246 16 TDVDVHHLK Unmodified 1062.5458 0.54580778 5370 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 2 1 18.303 18.249 2 0.021923 18617 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.854 7.4073 + 11818000 0 0 0 2119200 1581500 6299400 0 0 1818000 0 0 0 0 0 0 50910 5370 45706 427027;427028;427029;427030;427031 337256 337256 1 TDVDVSLPK Unmodified 972.51278 0.51277632 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 51.915 51.574 2 0.0052698 58453 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 78.334 44.596 587420000 0 96326000 0 26960000 28667000 0 34889000 38815000 34842000 40977000 56014000 46743000 62528000 49308000 71347000 50911 2172 45707 427032;427033;427034;427035;427036;427037;427038;427039;427040;427041;427042;427043 337257;337258;337259;337260;337261;337262;337263;337264;337265;337266;337267;337268;337269;337270;337271;337272 337259 16 TDVGAPFGPQGHR Unmodified 1337.6476 0.64764709 165 O00512 BCL9 B-cell CLL/lymphoma 9 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 38.319 38.515 3 0.0011342 41508 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.425 34.018 93535000 0 0 0 6377400 4559300 0 7179900 0 5692200 9953500 8902600 11576000 8923200 13027000 17344000 50912 165 45708 427044;427045;427046;427047;427048;427049;427050;427051;427052;427053 337273;337274 337273 2 TDVHELLDVIIADLDGGTIK Unmodified 2136.1314 0.13141469 3183 Q86WG5 SBF2 Myotubularin-related protein 13 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 104.51 99.011 3 0.0016119 124358 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 28.202 19.106 3190800 1446600 1744200 0 0 0 0 0 0 0 0 0 0 0 0 0 50913 3183 45709 427054;427055;427056 337275;337276 337276 2 TDVNKIEEFLEEVLCPPK Unmodified 2159.082 0.082021655 5270 Q9Y696 CLIC4 Chloride intracellular channel protein 4 yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 102.32 96.48 3 4.5012E-05 121796 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.184 63.087 28131000 26641000 1489900 0 0 0 0 0 0 0 0 0 0 0 0 0 50914 5270 45710 427057;427058 337277;337278 337278 2 TDVNPFLAPR Unmodified 1128.5928 0.59275797 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.154 66.239 2 3.1277E-06 75624 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 150.05 133.28 231410000 0 0 0 10745000 15254000 13001000 17963000 20214000 15053000 16958000 29856000 24432000 24465000 19287000 24185000 50915 2556 45711 427059;427060;427061;427062;427063;427064;427065;427066;427067;427068;427069;427070 337279;337280;337281;337282;337283;337284;337285;337286;337287;337288;337289;337290 337288 12 TDVSAADIVLSK Unmodified 1217.6503 0.65033243 1738 P54277 PMS1 PMS1 protein homolog 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 68.16 66.772 2 0.0023325 76726 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 63.408 44.628 109670000 3464600 53828000 0 4462600 4497500 7937900 5974000 5952500 0 0 9539300 7328200 6688600 0 0 50916 1738 45712 427071;427072;427073;427074;427075;427076;427077;427078;427079;427080 337291;337292;337293;337294;337295;337296;337297 337292 7 TDWLDGK Unmodified 833.39193 0.3919329 1278;5038 P30405;Q9UNP9 PPIF;PPIE Peptidyl-prolyl cis-trans isomerase F, mitochondrial;Peptidyl-prolyl cis-trans isomerase E no no 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 47.601 40.965 2 0.043624 53287 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.146 43.339 117670000 5710600 111960000 0 0 0 0 0 0 0 0 0 0 0 0 0 50917 1278;5038 45713 427081;427082 337298 337298 1 TDWTVEDGLQK Unmodified 1290.6092 0.6091959 3713 Q969F9 HPS3 Hermansky-Pudlak syndrome 3 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 58.803 59.023 2 0.00089911 67816 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 76.465 65.635 36409000 0 0 0 0 3267300 0 0 4729500 0 5524700 4848100 4416200 6015700 0 7607300 50918 3713 45714 427083;427084;427085;427086;427087;427088;427089;427090;427091;427092 337299;337300;337301;337302;337303;337304;337305;337306;337307;337308 337308 10 TDYIPLLDVDEK Unmodified 1419.7133 0.71332662 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.71 3.81 6 3 12 3 5 1 1 1 1 1 1 1 1 1 1 1 1 1 86.501 85.096 2 3.6342E-05 98718 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 104.52 93.693 1428400000 137700000 1093500000 20774000 11278000 9103300 11578000 8429600 11332000 9098500 13207000 12882000 22138000 15538000 16105000 35714000 50919 1226 45715 427093;427094;427095;427096;427097;427098;427099;427100;427101;427102;427103;427104;427105;427106;427107;427108;427109;427110;427111;427112;427113 337309;337310;337311;337312;337313;337314;337315;337316;337317;337318;337319;337320;337321;337322;337323;337324;337325;337326;337327;337328;337329 337317 19 TDYMVGSYGPR Oxidation (M) 1260.5445 0.54448715 1689 P52565 ARHGDIA Rho GDP-dissociation inhibitor 1 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 42.189 42.433 2 0.00022 47008 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 100.25 92.314 156380000 0 0 0 7320400 0 6980900 6791100 0 5271900 0 27141000 23516000 0 19137000 60217000 50920 1689 45716 427114;427115;427116;427117;427118;427119;427120;427121 337330;337331;337332;337333;337334;337335 337334 2733 6 TDYMVGSYGPR Unmodified 1244.5496 0.54957253 1689 P52565 ARHGDIA Rho GDP-dissociation inhibitor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 51.393 51.631 2 1.6842E-05 57203 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 154.35 134.57 232240000 0 0 0 0 4386900 0 6382600 12368000 0 9040300 41401000 30994000 0 23287000 104380000 50921 1689 45716 427122;427123;427124;427125;427126;427127;427128;427129 337336;337337;337338;337339;337340;337341;337342;337343 337338 8 TDYMVGSYGPRAEEYEFLTPVEEAPK Unmodified 2977.3692 0.36915513 1689 P52565 ARHGDIA Rho GDP-dissociation inhibitor 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.29 0.452 5 2 2 4 1 89.538 85.013 3 4.7165E-120 106243 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 154.49 143.84 593530000 166340000 343410000 83780000 0 0 0 0 0 0 0 0 0 0 0 0 50922 1689 45717 427130;427131;427132;427133;427134;427135;427136 337344;337345;337346;337347;337348;337349;337350;337351;337352;337353;337354;337355 337344 12 TDYMVGSYGPRAEEYEFLTPVEEAPK Oxidation (M) 2993.3641 0.36406975 1689 P52565 ARHGDIA Rho GDP-dissociation inhibitor 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2.5 0.5 2 2 2 1 1 86.21 81.861 3 5.372E-134 100244 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 167.51 163.67 505710000 216210000 106410000 183080000 0 0 0 0 0 0 0 0 0 0 0 0 50923 1689 45717 427137;427138;427139;427140 337356;337357;337358;337359;337360;337361;337362 337360 2733 7 TDYNASVSVPDSSGPER Unmodified 1779.7911 0.79113602 1868 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.393 48.554 2 2.9217E-41 54542 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 190.85 174.85 1746100000 0 0 0 76097000 71569000 142750000 100870000 72486000 50822000 192060000 206250000 211880000 129050000 139230000 353010000 50924 1868 45718 427141;427142;427143;427144;427145;427146;427147;427148;427149;427150;427151;427152 337363;337364;337365;337366;337367;337368;337369;337370;337371;337372;337373;337374 337365 12 TDYTLSIANR Unmodified 1152.5775 0.57750184 3945 Q96P63 SERPINB12 Serpin B12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 2 1 2 2 2 1 1 1 1 1 1 1 46.38 46.401 2;3 1.7966E-54 61972 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 194.9 172.16 722840000 0 0 0 186820000 51741000 55549000 77529000 121140000 28671000 56461000 43609000 0 54461000 46855000 0 50925 3945 45719 427153;427154;427155;427156;427157;427158;427159;427160;427161;427162;427163;427164;427165;427166;427167;427168 337375;337376;337377;337378;337379;337380;337381;337382;337383;337384;337385;337386;337387;337388;337389;337390 337383 15 TEAAAAAPQR Unmodified 984.49886 0.49885759 694 O95817 BAG3 BAG family molecular chaperone regulator 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 9.704 9.8361 2 0.0022627 8627 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 85.212 42.212 21386000 0 0 0 970460 1039400 1011000 1532100 1071900 889420 1032300 3478300 3796600 1607500 1970900 2986600 50926 694 45720 427169;427170;427171;427172;427173;427174;427175;427176;427177;427178;427179;427180 337391;337392;337393;337394;337395;337396;337397;337398;337399;337400;337401;337402 337399 10 TEAAATTRKPESNAVTK Unmodified 1773.9221 0.92209062 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11.374 10.838 3 3.4536E-06 14398 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 96.247 70.928 243980000 37761000 21007000 95838000 4006200 3267800 9209600 5239800 3105900 4802900 5901800 11245000 10917000 8497700 6790600 16390000 50927 1226 45721 427181;427182;427183;427184;427185;427186;427187;427188;427189;427190;427191;427192;427193;427194;427195 337403;337404;337405;337406;337407;337408;337409;337410;337411;337412 337411 10 TEAADLCK Unmodified 906.41168 0.41168206 1031 P16070 CD44 CD44 antigen yes yes 0 0 0 By matching By MS/MS By matching 10 0 3 1 1 1 14.279 14.654 2 0.011282 13165 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 77.282 44.812 19751000 0 0 0 0 0 0 0 0 0 0 0 6624600 0 6570100 6556100 50928 1031 45722 427196;427197;427198 337413 337413 1 TEAASDPQHPAASEGAAAAAASPPLLR Unmodified 2556.2568 0.25684299 4019 Q99536 VAT1 Synaptic vesicle membrane protein VAT-1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.452 63.543 3 7.3531E-61 72507 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 110.83 103.38 383000000 0 0 0 16994000 22765000 25375000 25139000 22864000 15858000 36757000 53754000 52519000 30563000 27304000 53102000 50929 4019 45723 427199;427200;427201;427202;427203;427204;427205;427206;427207;427208;427209;427210 337414;337415;337416;337417;337418;337419;337420;337421;337422;337423;337424;337425;337426;337427;337428 337421 15 TEADAEK Unmodified 762.33956 0.33956298 1085 P19338 NCL Nucleolin yes no 0 0 0 By MS/MS By matching 1 0 2 1 1 108.95 112.03 2 0.038776 92871 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 81.784 30.818 68598000 64079000 4519100 0 0 0 0 0 0 0 0 0 0 0 0 0 50930 1085 45724 427211;427212 337429 337429 1 TEADVNPK Acetyl (Protein N-term) 914.43453 0.434526 1770 P55769 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed yes yes 1 0 0 By MS/MS By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 22.9 23.065 2 0.0066549 24422 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 62.659 45.695 117260000 0 0 0 6460800 5762500 11670000 9282900 6702700 6575200 16955000 12371000 14190000 15493000 11798000 0 50931 1770 45725 427213;427214;427215;427216;427217;427218;427219;427220;427221;427222;427223 337430;337431 337431 2 TEAEIALK Unmodified 873.48075 0.48074791 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 35.483 35.624 2 0.010495 40017 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 79.469 25.914 84791000 0 0 0 9635200 6730700 0 9885000 0 8278000 0 11420000 17857000 10376000 10609000 0 50932 2501 45726 427224;427225;427226;427227;427228;427229;427230;427231 337432;337433;337434;337435;337436 337436 5 TEAESWYQTK Unmodified 1241.5564 0.55643205 74 CON__P13647;P13647 KRT5 Keratin, type II cytoskeletal 5 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.65 38.829 2 4.0908E-32 43844 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 182.29 140.84 + 1111100000 0 0 0 239460000 52281000 59998000 49165000 171070000 42676000 101780000 85338000 99204000 129400000 34006000 46679000 50933 74 45727 427232;427233;427234;427235;427236;427237;427238;427239;427240;427241;427242;427243 337437;337438;337439;337440;337441;337442;337443;337444;337445;337446;337447;337448;337449;337450 337449 14 TEAGAVGEAGGAEDPGAAAGGSVR Unmodified 2055.9457 0.94573918 3413 Q8ND04 SMG8 Protein SMG8 yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 41.004 41.401 2 3.821E-11 45283 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.541 84.048 11766000 0 0 0 0 0 0 0 3651400 0 0 0 0 0 2781000 5333900 50934 3413 45728 427244;427245;427246 337451 337451 1 TEALLEAK Unmodified 873.48075 0.48074791 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 32.79 33.101 2 0.020746 36067 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 62.546 26.151 40052000 0 0 0 0 3163700 0 4166500 0 0 0 7324100 8787600 5078400 4210500 7321600 50935 2291 45729 427247;427248;427249;427250;427251;427252;427253 337452;337453;337454 337452 3 TEALTQAFR Unmodified 1035.5349 0.53490874 5077 Q9Y230 RUVBL2 RuvB-like 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 49.779 49.944 2 0.0034957 56392 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 107.29 83.34 21892000 0 0 0 0 0 0 0 21892000 0 0 0 0 0 0 0 50936 5077 45730 427254;427255;427256 337455;337456;337457;337458 337457 4 TEALTQAFRR Unmodified 1191.636 0.63601977 5077 Q9Y230 RUVBL2 RuvB-like 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 41.791 41.967 2;3 1.7835E-09 45685 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 144.12 79.701 1029400000 0 0 0 56207000 60852000 72444000 72029000 63397000 53592000 93672000 113950000 123160000 106680000 84660000 128780000 50937 5077 45731 427257;427258;427259;427260;427261;427262;427263;427264;427265;427266;427267;427268;427269;427270;427271;427272;427273;427274;427275;427276;427277;427278;427279;427280 337459;337460;337461;337462;337463;337464;337465;337466;337467;337468;337469;337470;337471;337472;337473;337474;337475 337464 13 TEALTSAK Unmodified 819.4338 0.43379771 819 P06396;CON__Q3SX14 GSN Gelsolin yes no 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 10.149 10.296 2 0.035078 8837 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 52.716 27.718 + 27792000 0 0 0 4787700 3241800 0 0 3195300 2497400 1998000 0 4267700 3280000 2056000 2468300 50938 819 45732 427281;427282;427283;427284;427285;427286;427287;427288;427289 337476;337477;337478 337477 3 TEANLEVLK Unmodified 1015.555 0.55497548 2922 Q6P1N9 TATDN1 Putative deoxyribonuclease TATDN1 yes yes 0 0 0 By MS/MS By MS/MS 2.67 0.471 1 2 1 2 55.047 49.692 2 0.020716 63932 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.92 42.565 415330000 581880 414750000 0 0 0 0 0 0 0 0 0 0 0 0 0 50939 2922 45733 427290;427291;427292 337479;337480 337479 2 TEAPAAPAAQETK Unmodified 1283.6357 0.635745 1993 P80723 BASP1 Brain acid soluble protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.17 4.02 3 3 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 35.428 35.309 2 6.7028E-25 92696 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 192.44 185.5 978110000 158730000 128130000 2124500 19208000 26808000 45350000 21831000 23982000 32883000 52014000 118130000 119540000 57623000 62311000 109440000 50940 1993 45734 427293;427294;427295;427296;427297;427298;427299;427300;427301;427302;427303;427304;427305;427306;427307;427308;427309;427310 337481;337482;337483;337484;337485;337486;337487;337488;337489;337490;337491;337492;337493;337494;337495;337496;337497;337498;337499;337500;337501;337502 337488 22 TEAPQASPLAK Unmodified 1111.5873 0.58733824 3271 Q8IY33 MICALL2 MICAL-like protein 2 yes yes 0 0 0 By MS/MS 10 0 1 1 29.006 29.174 2 0.015117 31525 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 44.882 9.3409 12755000 0 0 0 0 0 0 0 12755000 0 0 0 0 0 0 0 50941 3271 45735 427311 337503 337503 1 TEAPTWETHGNLMTER Unmodified 1871.8472 0.84721111 2756 Q5SRE5 NUP188 Nucleoporin NUP188 homolog yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 57.801 58.109 3 0.0068359 65442 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.593 30.561 46578000 0 0 0 0 0 15532000 0 0 0 6843800 0 7417900 0 4853000 11932000 50942 2756 45736 427312;427313;427314;427315;427316 337504;337505 337504 2 TEAQANQISLPR Unmodified 1326.6892 0.68917755 4785 Q9P000 COMMD9 COMM domain-containing protein 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 48.762 49.017 2 0.00082815 54162 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.596 72.343 147190000 0 0 0 0 7316600 0 14393000 17362000 0 12274000 23760000 14647000 17536000 13244000 26656000 50943 4785 45737 427317;427318;427319;427320;427321;427322;427323;427324;427325;427326 337506;337507;337508;337509;337510;337511;337512;337513;337514 337508 8 TEASPESMLSPSHGSNPIEDPLEAETQHK Unmodified 3117.4197 0.41968715 4326 Q9H0E9 BRD8 Bromodomain-containing protein 8 yes yes 0 0 0 By MS/MS 3 0 1 1 79.6 76.229 4 0.0059766 91489 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 26.187 23.719 4148300 0 4148300 0 0 0 0 0 0 0 0 0 0 0 0 0 50944 4326 45738 427327 337515 337515 1 TEAVAIMCK Unmodified 1021.4936 0.49363755 3524 Q8TF05 PPP4R1 Serine/threonine-protein phosphatase 4 regulatory subunit 1 yes yes 0 0 0 By MS/MS 2 0 1 1 45.472 40.15 2 0.018931 52177 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.058 66.184 64790000 0 64790000 0 0 0 0 0 0 0 0 0 0 0 0 0 50945 3524 45739 427328 337516 337516 1 TEAYLPDDK Unmodified 1050.487 0.4869555 242 O15027 SEC16A Protein transport protein Sec16A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 33.881 34.138 2 0.005264 37774 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 78.516 60.481 71147000 0 0 0 0 5141900 8988700 0 6611000 5356000 6409200 7812500 9244400 6913600 6188600 8481200 50946 242 45740 427329;427330;427331;427332;427333;427334;427335;427336;427337;427338 337517;337518;337519;337520;337521;337522;337523;337524;337525;337526 337526 10 TECAEPPRDEPPADGALK Unmodified 1951.8946 0.89455524 1709 P53041 PPP5C Serine/threonine-protein phosphatase 5 yes yes 0 0 1 By MS/MS 10 0 1 1 37.488 38.224 3 0.045602 41328 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 23.435 13.096 6132400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6132400 50947 1709 45741 427339 337527 337527 1 TECAVVLGSLAMGTENNVK Unmodified 1991.9656 0.96561169 3220 Q8IUR7 ARMC8 Armadillo repeat-containing protein 8 yes yes 0 0 0 By MS/MS 2 0 1 1 85.784 81.01 2 6.063E-103 100749 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 199.31 166.26 23590000 0 23590000 0 0 0 0 0 0 0 0 0 0 0 0 0 50948 3220 45742 427340 337528 337528 1 TECGCQFTSK Unmodified 1216.4853 0.48525771 2330 Q13618 CUL3 Cullin-3 yes yes 0 0 0 By MS/MS 2 0 1 1 19.783 16.208 2 0.0049244 21274 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.308 77.321 12964000 0 12964000 0 0 0 0 0 0 0 0 0 0 0 0 0 50949 2330 45743 427341 337529 337529 1 TECYGYALGDATR Unmodified 1475.6351 0.63509307 1709 P53041 PPP5C Serine/threonine-protein phosphatase 5 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 51.952 52.356 2 0.0020611 58179 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.781 56.396 39834000 0 0 0 0 0 0 0 0 0 2834900 6905000 6303500 1899000 3948700 17943000 50950 1709 45744 427342;427343;427344;427345;427346;427347 337530 337530 1 TEDAAQELLLPESK Unmodified 1542.7777 0.77771779 2838 Q63HN8 RNF213 E3 ubiquitin-protein ligase RNF213 yes yes 0 0 0 By MS/MS 10 0 1 1 72.312 72.715 2 0.021119 83163 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.701 42.317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50951 2838 45745 427348 337531 337531 1 TEDALGLTITDNGAGYAFIK Unmodified 2069.0317 0.031700644 3527 Q8TF64 GIPC3 PDZ domain-containing protein GIPC3 yes yes 0 0 0 By MS/MS By matching 2.67 0.471 1 2 2 1 92.397 87.438 2 1.2389E-46 110655 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 166.48 153.5 12973000 10523000 2450600 0 0 0 0 0 0 0 0 0 0 0 0 0 50952 3527 45746 427349;427350;427351 337532;337533 337533 2 TEDDFNDWCQQVK Unmodified 1683.6835 0.68349983 5207 Q9Y4P1 ATG4B Cysteine protease ATG4B yes yes 0 0 0 By MS/MS 2 0 1 1 68.383 62.483 2 0.0012484 79703 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.89 107.77 43377000 0 43377000 0 0 0 0 0 0 0 0 0 0 0 0 0 50953 5207 45747 427352 337534 337534 1 TEDESLVENNDNIDEEAREELREQVYDAMGEK Unmodified 3768.6545 0.65445071 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 0 2 By MS/MS 2 0 1 1 89.194 81.063 4 1.1945E-21 105353 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.365 72.953 41935000 41935000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50954 1564 45748 427353 337535 337535 1 TEDEVLTSK Unmodified 1020.4975 0.49752018 4087 Q9BQ61 C19orf43 Uncharacterized protein C19orf43 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22.029 21.547 2 0.0030654 23124 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 124.23 96.706 616580000 33546000 35923000 0 30439000 27170000 32779000 31209000 28302000 29136000 36356000 62366000 86406000 46653000 46730000 89563000 50955 4087 45749 427354;427355;427356;427357;427358;427359;427360;427361;427362;427363;427364;427365;427366;427367 337536;337537;337538;337539;337540;337541;337542;337543;337544;337545;337546;337547;337548;337549 337548 13 TEDGEGIVIALSVDTPPAAVREK Unmodified 2366.2329 0.23291965 2051 Q01167 FOXK2 Forkhead box protein K2 yes yes 0 0 1 By MS/MS 2 0 1 1 89.583 81.452 3 0.0010285 105806 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 37.065 31.185 10928000 10928000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50956 2051 45750 427368 337550;337551 337551 2 TEDGGEFEEGASENNAK Unmodified 1782.718 0.71803066 360 O43719 HTATSF1 HIV Tat-specific factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.21 3.47 2 2 15 2 2 1 1 1 1 1 1 1 1 2 1 2 2 35.46 35.474 2;3 0 92303 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 332.45 317.99 595700000 56984000 91013000 0 16231000 19845000 20609000 21680000 19854000 22644000 31848000 48593000 60560000 45037000 73165000 67634000 50957 360 45751 427369;427370;427371;427372;427373;427374;427375;427376;427377;427378;427379;427380;427381;427382;427383;427384;427385;427386;427387 337552;337553;337554;337555;337556;337557;337558;337559;337560;337561;337562;337563;337564;337565;337566;337567;337568 337558 17 TEDIIIK Unmodified 830.47493 0.47493425 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 42.021 40.209 2 0.02468 43900 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.305 16.502 666840000 20421000 460100000 0 0 0 0 0 0 0 0 47410000 0 36524000 38992000 63389000 50958 4819 45752 427388;427389;427390;427391;427392;427393 337569;337570;337571 337570 3 TEDIITAIR Unmodified 1030.5659 0.56587452 1323 P32754 HPD 4-hydroxyphenylpyruvate dioxygenase yes yes 0 0 0 By MS/MS 10 0 1 1 62.637 63.21 2 0.036213 71544 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.252 7.9712 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50959 1323 45753 427394 337572 337572 1 TEDLEATSEHFK Unmodified 1405.6361 0.63613893 4175 Q9BV40 VAMP8 Vesicle-associated membrane protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.21 2.31 1 1 17 2 1 2 1 2 1 1 1 1 2 2 2 1 38.692 38.335 2;3 2.1008E-07 49320 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.03 106.81 217210000 0 41310000 0 11718000 9442700 10048000 17749000 8848700 13238000 14293000 21077000 17098000 17720000 22493000 12178000 50960 4175 45754 427395;427396;427397;427398;427399;427400;427401;427402;427403;427404;427405;427406;427407;427408;427409;427410;427411;427412;427413 337573;337574;337575;337576;337577;337578;337579 337574 7 TEDLFENR Unmodified 1022.4669 0.46688876 3640 Q92615 LARP4B La-related protein 4B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.77 40.949 2 0.0063839 45206 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 101.33 89.134 99470000 0 0 0 6175500 7316200 8125700 9725800 0 6953500 8443500 9742600 10882000 8034400 8638200 15432000 50961 3640 45755 427414;427415;427416;427417;427418;427419;427420;427421;427422;427423;427424;427425 337580;337581;337582;337583;337584;337585;337586;337587;337588;337589;337590;337591;337592;337593 337586 14 TEDLGCMYK Unmodified 1115.4627 0.46273136 2330 Q13618 CUL3 Cullin-3 yes yes 0 0 0 By MS/MS 2 0 1 1 44.218 38.999 2 0.007613 50478 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.523 72.786 50383000 0 50383000 0 0 0 0 0 0 0 0 0 0 0 0 0 50962 2330 45756 427426 337594 337594 1 TEDLGCMYK Oxidation (M) 1131.4576 0.45764598 2330 Q13618 CUL3 Cullin-3 yes yes 0 1 0 By MS/MS 2 0 1 1 27.577 23.272 2 0.053385 30699 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.734 34.48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50963 2330 45756 427427 337595 337595 1 TEDLSSNFLSLQEIQTAYSK Unmodified 2273.1063 0.10632215 4292 Q9C0I1 MTMR12 Myotubularin-related protein 12 yes yes 0 0 0 By MS/MS 2 0 1 1 94.072 89.176 3 0.00021701 110678 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 50.226 41.938 29779000 0 29779000 0 0 0 0 0 0 0 0 0 0 0 0 0 50964 4292 45757 427428 337596;337597 337597 2 TEDSDDIHFEPVVQMPEK Unmodified 2114.9467 0.94665039 1601;32 P49792;P0DJD0;P0DJD1;A6NKT7;Q7Z3J3 RANBP2;RGPD1;RGPD2;RGPD3;RGPD4 E3 SUMO-protein ligase RanBP2;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RanBP2-like and GRIP domain-containing protein 3;RanBP2-like and GRIP domain-containing protein 4 no no 0 0 0 By MS/MS 3 0 1 1 78.706 75.335 3 0.0011315 90356 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 48.053 42.273 6190600 0 6190600 0 0 0 0 0 0 0 0 0 0 0 0 0 50965 1601;32 45758 427429 337598 337598 1 TEDSFYNNSYNPFK Unmodified 1724.7318 0.73183023 3418 Q8NDI1 EHBP1 EH domain-binding protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 80.093 75.381 2 1.9184E-44 93846 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 172.8 159.11 36511000 0 36511000 0 0 0 0 0 0 0 0 0 0 0 0 0 50966 3418 45759 427430 337599 337599 1 TEDSGLAAGPPEAAGENFAPCSVAPGK Unmodified 2599.186 0.18604581 3781 Q96CP2 FLYWCH2 FLYWCH family member 2 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 74.084 74.134 3 1.35E-30 85579 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 52.329 45.136 122970000 0 0 0 7675400 7887200 11558000 13404000 0 7621500 5662300 14347000 12991000 9602000 12202000 20021000 50967 3781 45760 427431;427432;427433;427434;427435;427436;427437;427438;427439;427440;427441 337600;337601;337602;337603;337604;337605;337606 337605 7 TEDSLMPEEEFLR Unmodified 1594.7185 0.71848835 2539 Q15459 SF3A1 Splicing factor 3A subunit 1 yes yes 0 0 0 By MS/MS 10 0 1 1 81.19 81.405 2 0.0016388 93819 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.017 70.187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50968 2539 45761 427442 337607 337607 1 TEDSLMPEEEFLRR Oxidation (M) 1766.8145 0.814514 2539 Q15459 SF3A1 Splicing factor 3A subunit 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 2 2 2 1 1 69.214 69.332 3 0.00040761 77576 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.139 56.139 272910000 0 0 0 12478000 0 21996000 14600000 16099000 0 43809000 53833000 0 40706000 32246000 37142000 50969 2539 45762 427443;427444;427445;427446;427447;427448;427449;427450;427451;427452;427453;427454 337608;337609;337610;337611;337612;337613;337614;337615 337610 4176 6 TEDSLMPEEEFLRR Unmodified 1750.8196 0.81959938 2539 Q15459 SF3A1 Splicing factor 3A subunit 1 yes yes 0 0 1 By MS/MS 2 0 1 1 78.796 76.168 3 0.0017424 92548 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 58.752 53.435 9724900 0 0 9724900 0 0 0 0 0 0 0 0 0 0 0 0 50970 2539 45762 427455 337616 337616 1 TEDSLMPEEEFLRRNK Unmodified 1992.9575 0.95748984 2539 Q15459 SF3A1 Splicing factor 3A subunit 1 yes yes 0 0 2 By MS/MS 2 0 2 2 77.676 69.545 3;4 0.0039653 91677 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.246 50.825 63501000 63501000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50971 2539 45763 427456;427457 337617;337618 337618 2 TEDSNAGNSGGNVPAPDSTK Unmodified 1916.8348 0.83479175 2155 Q08378 GOLGA3 Golgin subfamily A member 3 yes yes 0 0 0 By MS/MS 10 0 1 1 21.368 22.006 2 0.049458 21993 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 30.059 30.059 3362400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3362400 50972 2155 45764 427458 337619 337619 0 TEDSSVPETPDNERK Unmodified 1702.7646 0.76458692 4402 Q9H4L7 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 19.728 19.04 3 0.004501 23567 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 46.89 42.856 122970000 2826600 46557000 0 3438100 5109700 6860800 5598500 5281200 4338800 6810700 7613200 8300000 7331800 5183600 7716800 50973 4402 45765 427459;427460;427461;427462;427463;427464;427465;427466;427467;427468;427469;427470;427471;427472;427473 337620;337621;337622;337623;337624;337625;337626;337627;337628;337629;337630 337624 11 TEDTIFLR Unmodified 993.51311 0.51311067 760 P02763;P19652 ORM1;ORM2 Alpha-1-acid glycoprotein 1;Alpha-1-acid glycoprotein 2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 59.7 59.444 2 0.0075386 67555 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 89.296 42.87 39640000 0 0 0 26577000 0 0 0 13063000 0 0 0 0 0 0 0 50974 760 45766 427474;427475;427476 337631;337632;337633 337631 3 TEDYLWLK Unmodified 1066.5335 0.53351176 3311 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 75.413 74.883 2 0.0076415 85636 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.942 69.306 107380000 0 25708000 2534200 0 3066200 10065000 3804800 6706300 7293100 7735400 7251100 0 7784700 7690300 17745000 50975 3311 45767 427477;427478;427479;427480;427481;427482;427483;427484;427485;427486;427487;427488 337634;337635;337636;337637;337638;337639;337640;337641;337642;337643 337637 10 TEEADLLQTK Unmodified 1146.5768 0.57683314 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 43.23 42.354 2 1.0222E-05 53350 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 158.76 124.58 597390000 11230000 101870000 0 23791000 26127000 50691000 34623000 31531000 31905000 55622000 51156000 60273000 0 44857000 73717000 50976 643 45768 427489;427490;427491;427492;427493;427494;427495;427496;427497;427498;427499;427500;427501 337644;337645;337646;337647;337648;337649;337650;337651;337652;337653;337654;337655;337656;337657;337658 337648 13 TEEAFPGGPLGALR Unmodified 1413.7252 0.72522871 3510 Q8TE02 ELP5 Elongator complex protein 5 yes yes 0 0 0 By MS/MS 10 0 1 1 79.212 79.458 2 0.0045706 91442 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.626 45.94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50977 3510 45769 427502 337659 337659 1 TEEALQLYNQIIK Unmodified 1561.8352 0.83517309 578 O76094 SRP72 Signal recognition particle subunit SRP72 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 18 1 2 2 2 2 2 2 1 1 1 1 1 84.518 84.587 2;3 1.0144E-12 97492 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 154.84 120.12 223420000 0 0 0 3290200 12922000 19941000 17494000 32930000 21469000 36582000 22861000 28046000 9253600 12081000 6550300 50978 578 45770 427503;427504;427505;427506;427507;427508;427509;427510;427511;427512;427513;427514;427515;427516;427517;427518;427519;427520 337660;337661;337662;337663;337664;337665;337666;337667;337668;337669;337670;337671;337672;337673 337664 14 TEEARPSPAPGPGTPTGTPTR Unmodified 2076.0236 0.023595574 2686 Q4KMP7 TBC1D10B TBC1 domain family member 10B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 2 1 1 32.956 33.087 3 3.9404E-07 36343 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 50.255 40.467 30186000 0 0 0 0 3685900 7492100 4386200 0 3438900 0 0 6642100 0 4541100 0 50979 2686 45771 427521;427522;427523;427524;427525;427526;427527;427528 337674;337675;337676;337677;337678;337679;337680 337676 7 TEEASSGFLPGDR Unmodified 1364.6208 0.62082322 3573 Q8WWI1 LMO7 LIM domain only protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.744 48.902 2 2.1968E-11 54695 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 137.17 108.08 169140000 0 0 0 10062000 7409800 10313000 11537000 10166000 7698100 22032000 16328000 23062000 14194000 9254700 27084000 50980 3573 45772 427529;427530;427531;427532;427533;427534;427535;427536;427537;427538;427539;427540 337681;337682;337683;337684;337685;337686;337687;337688;337689;337690;337691;337692;337693;337694;337695 337691 15 TEEASSGFLPGDRNK Unmodified 1606.7587 0.75871368 3573 Q8WWI1 LMO7 LIM domain only protein 7 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching 10 0 16 2 2 1 2 2 2 1 1 1 1 1 37.503 37.571 2;3 0.01032 42146 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 35.182 27.591 167340000 0 0 0 24853000 24415000 2853200 29030000 26979000 22429000 5692800 0 8268000 7894400 5394500 9527800 50981 3573 45773 427541;427542;427543;427544;427545;427546;427547;427548;427549;427550;427551;427552;427553;427554;427555;427556 337696;337697 337697 2 TEEDETSEDANCLALSGHDK Unmodified 2219.9124 0.91244972 1644 P51003 PAPOLA Poly(A) polymerase alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 6.9 3.81 3 1 6 1 3 1 1 1 1 1 1 43.308 40.977 2;3 1.4134E-17 51992 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.346 69.394 153990000 13968000 108960000 0 0 0 0 0 0 0 5384700 5126300 0 3832000 3507400 13209000 50982 1644 45774 427557;427558;427559;427560;427561;427562;427563;427564;427565;427566 337698;337699;337700;337701;337702;337703;337704;337705;337706;337707;337708 337700 11 TEEDSEEVREQK Unmodified 1477.6532 0.65324556 2612 Q16543 CDC37 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 4 2 24 2 4 2 2 2 2 2 2 2 2 2 2 2 2 8.5439 7.9488 2;3 3.8437E-114 5759 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 215.56 189.62 2528600000 195630000 1474400000 0 32093000 16045000 27345000 27604000 22086000 32356000 55686000 248820000 127190000 51527000 69825000 148030000 50983 2612 45775 427567;427568;427569;427570;427571;427572;427573;427574;427575;427576;427577;427578;427579;427580;427581;427582;427583;427584;427585;427586;427587;427588;427589;427590;427591;427592;427593;427594;427595;427596 337709;337710;337711;337712;337713;337714;337715;337716;337717;337718;337719;337720;337721;337722;337723;337724;337725;337726;337727;337728;337729;337730;337731;337732;337733;337734;337735;337736 337726 27 TEEEEEEEEEEEEDDEEEEGDDEGQK Unmodified 3143.0866 0.0865659 4976 Q9UKV3 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes yes 0 0 0 By MS/MS 1 0 1 1 105.93 106.82 3 5.2642E-38 98716 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 108.77 108.77 6603000 0 6603000 0 0 0 0 0 0 0 0 0 0 0 0 0 50984 4976 45776 427597 337737 337737 1 TEEEEIDR Unmodified 1019.4407 0.44073359 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 13.994 14.174 2 0.0045343 13406 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 110.31 64.974 733050000 0 0 0 40916000 57579000 66497000 0 0 52474000 70490000 92868000 78016000 72374000 105080000 96758000 50985 2290 45777 427598;427599;427600;427601;427602;427603;427604;427605;427606;427607 337738;337739;337740;337741;337742;337743;337744;337745;337746;337747;337748;337749 337739 12 TEEEGVGCGGAGR Unmodified 1277.5306 0.530628 2234 Q13111 CHAF1A Chromatin assembly factor 1 subunit A yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 12.02 12.183 2 0.0035394 10099 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 65.347 43.84 14499000 0 0 0 1203300 983410 1678000 0 0 1304300 1196200 1383500 2250600 1235900 1558100 1706200 50986 2234 45778 427608;427609;427610;427611;427612;427613;427614;427615;427616;427617 337750;337751;337752;337753 337751 4 TEEEIEMMK Oxidation (M) 1154.4835 0.48352638 3562 Q8WVK2 SNRNP27 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 6 1 1 1 1 1 1 29.382 29.539 2 0.011606 30844 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 55.531 48.31 14397000 0 0 0 0 1419700 2149500 0 0 2209700 2348300 0 3846400 2423000 0 0 50987 3562 45779 427618;427619;427620;427621;427622;427623 337754;337755;337756 337754 5052 3 TEEEIEMMK Unmodified 1138.4886 0.48861176 3562 Q8WVK2 SNRNP27 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 43.777 44.131 2 0.005076 48632 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 84.368 66.333 24826000 0 0 0 0 0 6285800 0 0 0 0 0 12181000 0 6359100 0 50988 3562 45779 427624;427625;427626;427627 337757;337758;337759 337759 3 TEEEIKITNLEEIITK Unmodified 1902.0197 0.019738974 5379 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.5 1.94 1 15 1 1 1 1 1 1 1 2 1 1 1 2 2 7.6499 7.5432 3;4 0.0060001 5108 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 27.643 8.8838 + 605250000 150970000 0 0 6559300 8329700 5431700 10705000 13613000 14574000 80363000 58804000 41920000 23768000 72090000 118120000 50989 5379 45780 427628;427629;427630;427631;427632;427633;427634;427635;427636;427637;427638;427639;427640;427641;427642;427643 337760;337761;337762;337763 337760 4 TEEELSEEK Unmodified 1092.4823 0.48226405 3065 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.376 14.538 2 0.0034711 13321 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 103.87 86.486 59643000 0 0 0 4796800 3526300 5123000 3061700 5661100 4082600 5242400 6439200 5175400 5806900 4227000 6500600 50990 3065 45781 427644;427645;427646;427647;427648;427649;427650;427651;427652;427653;427654;427655 337764;337765;337766;337767;337768;337769;337770;337771;337772;337773;337774 337767 11 TEEFEVTK Unmodified 981.46549 0.46549177 3717 Q969H8 MYDGF Myeloid-derived growth factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.08 3.33 2 1 9 1 2 1 1 1 1 1 1 1 1 1 32.932 31.736 2 0.0055025 33717 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 116.73 61.961 2573500000 90774000 2151000000 0 0 0 7478800 0 11958000 5310900 11192000 49991000 72232000 0 37793000 135770000 50991 3717 45782 427656;427657;427658;427659;427660;427661;427662;427663;427664;427665;427666;427667 337775;337776;337777;337778;337779;337780;337781;337782;337783;337784;337785;337786 337778 12 TEEGEIDYSAEEGENRR Unmodified 1982.8454 0.84535644 3567 Q8WVV9 HNRNPLL Heterogeneous nuclear ribonucleoprotein L-like yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.023 34.206 3 1.7953E-41 36981 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 145.69 143.77 211140000 0 0 0 8323800 11391000 18503000 12700000 13175000 11411000 18380000 21566000 30072000 16021000 13425000 36170000 50992 3567 45783 427668;427669;427670;427671;427672;427673;427674;427675;427676;427677;427678;427679 337787;337788;337789;337790;337791;337792;337793;337794;337795;337796;337797;337798;337799;337800;337801;337802;337803 337799 17 TEEGEIDYSAEEGENRREATPR Unmodified 2537.1266 0.12661667 3567 Q8WVV9 HNRNPLL Heterogeneous nuclear ribonucleoprotein L-like yes yes 0 0 2 By MS/MS 2 0 1 1 39.374 35.825 4 0.006754 45282 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 29.136 25.108 5494600 0 0 5494600 0 0 0 0 0 0 0 0 0 0 0 0 50993 3567 45784 427680 337804 337804 1 TEEGLGFNIMGGK Oxidation (M) 1367.6391 0.63911582 4651 Q9NUP9 LIN7C Protein lin-7 homolog C yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 68.444 63.167 2 0.0018433 80566 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.898 67.583 61429000 0 61429000 0 0 0 0 0 0 0 0 0 0 0 0 0 50994 4651 45785 427681;427682 337805 337805 6059 1 TEEGLGFNIMGGK Unmodified 1351.6442 0.6442012 4651 Q9NUP9 LIN7C Protein lin-7 homolog C yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 78.739 77.211 2 3.7353E-21 95744 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 142.98 127.83 126840000 0 119680000 0 0 0 2722000 0 0 0 0 0 0 0 4440200 0 50995 4651 45785 427683;427684;427685;427686;427687 337806;337807;337808;337809;337810 337807 5 TEEGPTLSYGR Unmodified 1208.5673 0.56733108 1473 P43243 MATR3 Matrin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.399 39.579 2 4.0637E-37 43610 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 182.76 152.6 2400300000 0 0 0 116130000 176600000 148880000 154870000 190510000 162820000 215030000 265410000 251800000 245890000 165960000 306390000 50996 1473 45786 427688;427689;427690;427691;427692;427693;427694;427695;427696;427697;427698;427699 337811;337812;337813;337814;337815;337816;337817;337818;337819;337820;337821;337822 337820 12 TEEGPTLSYGRDGR Unmodified 1536.7168 0.71684887 1473 P43243 MATR3 Matrin-3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 28 2 2 2 2 3 2 2 3 3 3 2 2 33.688 33.905 2;3 8.8696E-24 36354 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 113.35 101.66 848210000 0 0 0 41691000 45230000 35217000 70080000 105580000 45198000 67197000 130590000 101120000 77314000 53695000 75293000 50997 1473 45787 427700;427701;427702;427703;427704;427705;427706;427707;427708;427709;427710;427711;427712;427713;427714;427715;427716;427717;427718;427719;427720;427721;427722;427723;427724;427725;427726;427727 337823;337824;337825;337826;337827;337828;337829;337830;337831;337832;337833;337834;337835;337836;337837;337838;337839;337840 337834 14 TEEIAEEEETVFPK Unmodified 1649.7672 0.76721268 4588 Q9NR30 DDX21 Nucleolar RNA helicase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 69.029 69.171 2 0.0011893 79661 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 65.5 55.547 56263000 0 0 0 0 2733300 5194200 4060900 3851400 0 4362900 5303100 8283900 6449600 5573300 10451000 50998 4588 45788 427728;427729;427730;427731;427732;427733;427734;427735;427736;427737 337841;337842;337843;337844;337845 337841 5 TEEIAQER Unmodified 974.46689 0.46688876 4350;4576 Q9H1H9;Q9NQT8 KIF13A;KIF13B Kinesin-like protein KIF13A;Kinesin-like protein KIF13B no no 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 13.166 13.353 2 0.0063516 11918 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 101.6 53.04 33950000 0 0 0 2116400 0 5785200 0 3673900 3166600 0 4127300 0 1683600 5236900 8160200 50999 4350;4576 45789 427738;427739;427740;427741;427742;427743;427744;427745 337846;337847;337848;337849 337846 4 TEELEEESFPER Unmodified 1493.6522 0.65218292 5122 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.559 51.708 2 2.2105E-06 58392 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 129.7 125.69 304390000 0 0 0 14639000 19626000 16609000 24135000 12853000 14674000 20348000 25720000 45810000 40628000 25881000 43469000 51000 5122 45790 427746;427747;427748;427749;427750;427751;427752;427753;427754;427755;427756;427757 337850;337851;337852;337853;337854;337855;337856;337857;337858;337859;337860;337861 337856 11 TEELEEESFPERSK Unmodified 1708.7792 0.77917435 5122 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 46.796 41.815 2;3 6.7234E-15 54724 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 148.28 125.04 47744000 0 41726000 6017500 0 0 0 0 0 0 0 0 0 0 0 0 51001 5122 45791 427758;427759;427760 337862;337863 337863 2 TEELEGQIK Unmodified 1045.5292 0.52915466 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 30.884 29.979 2 0.0028279 40577 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 116.73 39.668 57172000 10904000 0 0 0 0 0 0 0 0 0 10278000 0 6619100 9643400 19727000 51002 2495 45792 427761;427762;427763;427764;427765;427766;427767 337864;337865;337866;337867;337868;337869;337870 337866 6 TEELIESPK Unmodified 1044.5339 0.53390569 4030 Q99590 SCAF11 Protein SCAF11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 36.473 36.751 2 0.012756 39327 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 60.828 38.697 58609000 0 0 0 0 2911400 0 3636100 3417200 0 6485600 5053300 13787000 8283900 7590900 7443200 51003 4030 45793 427768;427769;427770;427771;427772;427773;427774;427775;427776 337871 337871 1 TEELKPQVEEK Unmodified 1328.6824 0.68236084 5028 Q9UN86 G3BP2 Ras GTPase-activating protein-binding protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.65 1.53 1 19 1 2 2 2 2 1 2 2 2 2 2 24.159 24.185 2;3 1.4844E-17 26172 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 166.07 124.41 778530000 0 111680000 0 0 64632000 76847000 80506000 0 57904000 11489000 79318000 79966000 72367000 54017000 89806000 51004 5028 45794 427777;427778;427779;427780;427781;427782;427783;427784;427785;427786;427787;427788;427789;427790;427791;427792;427793;427794;427795;427796 337872;337873;337874;337875;337876;337877;337878;337879;337880;337881;337882;337883;337884;337885;337886 337886 7 TEELMELTDEQRNELMK Oxidation (M) 2123.9715 0.97148493 3903 Q96K76 USP47 Ubiquitin carboxyl-terminal hydrolase 47 yes yes 0 1 1 By MS/MS 2.5 0.5 1 1 2 73.96 69.408 3 0.0013373 87437 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 56.959 53.964 29246000 0 29246000 0 0 0 0 0 0 0 0 0 0 0 0 0 51005 3903 45795 427797;427798 337887 337887 5405 1 TEELMELTDEQRNELMK 2 Oxidation (M) 2139.9664 0.96639955 3903 Q96K76 USP47 Ubiquitin carboxyl-terminal hydrolase 47 yes yes 0 2 1 By MS/MS 3 0 1 1 63.919 59.173 3 0.043443 72664 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 53.328 49.78 3998300 0 3998300 0 0 0 0 0 0 0 0 0 0 0 0 0 51006 3903 45795 427799 337888 337888 5405 1 TEELMELTDEQRNELMK Unmodified 2107.9766 0.97657031 3903 Q96K76 USP47 Ubiquitin carboxyl-terminal hydrolase 47 yes yes 0 0 1 By MS/MS 2 0 1 1 80.981 72.85 3 0.004682 95574 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 59.345 54.015 9550300 9550300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51007 3903 45795 427800 337889 337889 1 TEELNREVATNSELVQSGK Unmodified 2103.0444 0.044390595 56;84 CON__P02533;P02533;CON__Q04695;Q04695 KRT14;KRT17 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 17 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.43 3.14 5 1 24 2 3 1 2 2 2 2 2 2 2 2 2 2 2 2 50.248 49.615 2;3 1.1133E-243 55192 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 248.23 231.45 + 10423000000 30257000 431630000 11134000 2566100000 620160000 566850000 526150000 1274900000 295370000 654880000 694100000 691590000 1354900000 343900000 360700000 51008 56;84 45796 427801;427802;427803;427804;427805;427806;427807;427808;427809;427810;427811;427812;427813;427814;427815;427816;427817;427818;427819;427820;427821;427822;427823;427824;427825;427826;427827;427828;427829;427830 337890;337891;337892;337893;337894;337895;337896;337897;337898;337899;337900;337901;337902;337903;337904;337905;337906;337907;337908;337909;337910;337911;337912;337913;337914;337915;337916;337917;337918;337919;337920;337921 337910 31 TEEMPNDSVLENK Unmodified 1504.6715 0.67153816 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49.698 48.84 2 1.2626E-12 55312 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 155.11 138.09 362250000 6736200 40279000 0 7715700 6133100 21780000 10442000 9258500 21909000 14709000 45818000 42560000 19743000 30036000 85130000 51009 1564 45797 427831;427832;427833;427834;427835;427836;427837;427838;427839;427840;427841;427842;427843;427844 337922;337923;337924;337925;337926;337927;337928;337929;337930;337931;337932;337933;337934;337935;337936;337937;337938;337939 337933 18 TEEMPNDSVLENK Oxidation (M) 1520.6665 0.66645278 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.31 2.4 1 12 1 1 1 1 1 1 2 1 1 1 1 1 34.715 34.986 2 6.0795E-13 37359 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 132.25 127.95 60323000 0 0 0 2820400 0 0 3469200 2227100 0 5715800 11337000 12696000 0 8904900 13152000 51010 1564 45797 427845;427846;427847;427848;427849;427850;427851;427852;427853;427854;427855;427856;427857 337940;337941;337942;337943;337944;337945;337946;337947;337948;337949;337950;337951 337943 2484 12 TEEPLFQVEDSSK Unmodified 1507.7042 0.70421849 3392 Q8NBF6 AVL9 Late secretory pathway protein AVL9 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 1 1 6 2 1 1 1 1 1 1 65.01 63.779 2 7.3258E-08 72369 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 116.77 92.779 113660000 0 80085000 0 3227800 0 0 0 0 0 7458500 5415200 0 5103600 5232700 7135600 51011 3392 45798 427858;427859;427860;427861;427862;427863;427864;427865 337952;337953;337954;337955;337956;337957;337958;337959 337954 7 TEEPTVHSSEAAIMNNSQGDGEHFAHPPSEVK Unmodified 3431.5324 0.5324255 3847 Q96G28 CFAP36 Cilia- and flagella-associated protein 36 yes yes 0 0 0 By MS/MS 2 0 1 1 62.91 59.148 4 0.0006558 73501 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 36.092 35.403 3628700 0 0 3628700 0 0 0 0 0 0 0 0 0 0 0 0 51012 3847 45799 427866 337960 337960 1 TEEQIAAEEAWNETEK Unmodified 1876.8327 0.83266649 3639 Q92614 MYO18A Unconventional myosin-XVIIIa yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 68.51 63.015 2;3 0.00072 80512 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.204 49.318 45673000 0 45673000 0 0 0 0 0 0 0 0 0 0 0 0 0 51013 3639 45800 427867;427868;427869 337961;337962 337962 2 TEEREQIK Unmodified 1031.5247 0.52473799 74;77;80 CON__P50446;CON__P13647;P13647;CON__P19013;P19013 KRT5;KRT4 Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 4 no no 0 0 1 By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 6.0686 6.1793 2 0.019318 4039 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 127.02 84.152 + 164140000 0 0 0 55155000 13552000 14621000 14854000 41766000 11675000 6461900 1339700 1219100 0 685600 2811800 51014 80;74;77 45801 427870;427871;427872;427873;427874;427875;427876;427877;427878;427879;427880 337963 337963 0 TEESPASDEAGEK Unmodified 1348.563 0.56303357 798 P05114 HMGN1 Non-histone chromosomal protein HMG-14 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.8 3.66 1 3 11 2 1 1 1 1 1 1 1 1 1 1 1 1 1 16.983 16.818 2 4.3823E-18 92451 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 152.07 143.21 273190000 181110000 11973000 869900 1650600 857120 0 1688600 1165900 1174400 1760500 12811000 15264000 1545000 8901600 32427000 51015 798 45802 427881;427882;427883;427884;427885;427886;427887;427888;427889;427890;427891;427892;427893;427894;427895 337964;337965;337966;337967;337968;337969;337970;337971;337972;337973;337974;337975;337976 337968 13 TEESSDVPRELIESIK Acetyl (Protein N-term) 1872.9317 0.93165225 2833 Q5VZK9 LRRC16A Leucine-rich repeat-containing protein 16A yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.12 3.72 2 1 5 1 2 1 1 1 1 1 87.164 84.541 2 2.3136E-91 105238 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 210.91 157.34 273960000 20473000 236080000 0 0 0 0 0 0 0 5068400 4201000 0 0 0 8142800 51016 2833 45803 427896;427897;427898;427899;427900;427901;427902;427903 337977;337978;337979;337980;337981;337982;337983;337984 337979 8 TEESSDVPRELIESIK Unmodified 1830.9211 0.92108756 2833 Q5VZK9 LRRC16A Leucine-rich repeat-containing protein 16A yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 82.755 77.04 3 0.00097146 99000 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.828 40.415 11523000 9486100 2036800 0 0 0 0 0 0 0 0 0 0 0 0 0 51017 2833 45803 427904;427905 337985;337986;337987 337986 3 TEESSELGNYVIK Unmodified 1467.7093 0.70930387 5000 Q9ULM3 YEATS2 YEATS domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 61.519 61.586 2 1.0738E-12 70145 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 129.85 117.64 62078000 0 0 0 4266900 8520900 7587300 0 3605800 0 7943900 8470400 14720000 0 0 6963500 51018 5000 45804 427906;427907;427908;427909;427910;427911;427912;427913;427914;427915;427916 337988;337989;337990;337991;337992;337993;337994;337995;337996 337994 9 TEETGPGMDEEDSELVAK Unmodified 1935.8255 0.8255322 4641 Q9NU22 MDN1 Midasin yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 51.741 51.925 2 9.963E-06 58800 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 74.46 68.801 17525000 0 0 0 0 0 3895900 0 0 2997800 0 0 0 6065200 4566300 0 51019 4641 45805 427917;427918;427919;427920 337997;337998;337999 337997 3 TEEVKEENLK Unmodified 1217.6139 0.61394692 535 O75717 WDHD1 WD repeat and HMG-box DNA-binding protein 1 yes yes 0 0 1 By MS/MS 3 0 1 1 18.701 14.984 3 0.022557 18776 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 52.725 25.836 7703100 0 7703100 0 0 0 0 0 0 0 0 0 0 0 0 0 51020 535 45806 427921 338000 338000 1 TEEVSNLK Unmodified 918.46583 0.46582612 2961 Q6PKG0 LARP1 La-related protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 18.277 17.581 2 0.0045796 18137 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 110.14 41.221 189380000 6896400 36386000 0 14342000 0 0 17534000 11778000 13559000 17067000 0 0 26199000 20638000 24977000 51021 2961 45807 427922;427923;427924;427925;427926;427927;427928;427929;427930;427931 338001;338002;338003;338004;338005;338006;338007;338008;338009;338010;338011;338012 338008 10 TEEYVLDFYDK Unmodified 1420.6398 0.63982732 4448 Q9H8E8 CSRP2BP Cysteine-rich protein 2-binding protein yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 79.063 79.023 2 0.00033092 91530 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 100.48 82.613 12470000 0 0 0 0 2491100 2565800 0 0 0 0 0 7413000 0 0 0 51022 4448 45808 427932;427933;427934 338013;338014 338013 2 TEFIGGSTPEQIK Unmodified 1405.7089 0.70890994 3767 Q96BY7 ATG2B Autophagy-related protein 2 homolog B yes yes 0 0 0 By MS/MS By matching By MS/MS 7.33 3.77 1 2 1 1 1 58.588 56.82 2 0.0084887 72467 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.355 51.684 26294000 0 17607000 0 0 0 0 0 0 0 0 4483700 0 0 4203300 0 51023 3767 45809 427935;427936;427937 338015;338016 338015 2 TEFLDLDNSPLSPPSPR Unmodified 1883.9265 0.92650729 3409 Q8NCF5 NFATC2IP NFATC2-interacting protein yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 85.542 85.598 2 1.2843E-13 99189 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 94.122 84.933 57748000 0 0 0 1649600 3554300 0 3488300 0 6666600 5501800 7899900 8068700 3957100 5098300 11863000 51024 3409 45810 427938;427939;427940;427941;427942;427943;427944;427945;427946;427947;427948 338017;338018;338019;338020;338021;338022;338023;338024;338025;338026;338027;338028 338023 12 TEFLSFMNTELAAFTK Oxidation (M) 1864.8917 0.89170169 1314 P31949 S100A11 Protein S100-A11;Protein S100-A11, N-terminally processed yes yes 0 1 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 94.913 91.395 2 1.029E-41 113553 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 147.24 133.97 83469000 0 79969000 3499800 0 0 0 0 0 0 0 0 0 0 0 0 51025 1314 45811 427949;427950;427951 338029;338030 338029 1965 2 TEFLSFMNTELAAFTK Unmodified 1848.8968 0.89678707 1314 P31949 S100A11 Protein S100-A11;Protein S100-A11, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.3 0.458 7 3 3 5 2 99.663 95.117 2;3 3.5781E-132 118591 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 232.42 210.87 954130000 55925000 894070000 4134200 0 0 0 0 0 0 0 0 0 0 0 0 51026 1314 45811 427952;427953;427954;427955;427956;427957;427958;427959;427960;427961 338031;338032;338033;338034;338035;338036;338037;338038;338039;338040 338031 9 TEFLSLLAK Unmodified 1020.5855 0.58554733 2215 Q12965 MYO1E Unconventional myosin-Ie yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.91 2.75 3 19 1 1 1 2 1 2 1 1 2 1 2 2 1 2 2 84.485 83.838 2 0.0067071 105913 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.74 79.882 871640000 266300000 262880000 80454000 8721100 14041000 24195000 17463000 19085000 26861000 23054000 25225000 31547000 14021000 19162000 38635000 51027 2215 45812 427962;427963;427964;427965;427966;427967;427968;427969;427970;427971;427972;427973;427974;427975;427976;427977;427978;427979;427980;427981;427982;427983 338041;338042;338043;338044;338045;338046 338041 6 TEFTLTEAVVESSRK Unmodified 1695.8679 0.86792978 2548 Q15554 TERF2 Telomeric repeat-binding factor 2 yes yes 0 0 1 By MS/MS 2 0 1 1 79.997 71.867 3 0.032619 94357 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 30.172 25.174 8300900 8300900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51028 2548 45813 427984 338047 338047 1 TEFTQGMILPTMNGESVDPVGQPALK 2 Oxidation (M) 2791.3408 0.34083189 661 O95433 AHSA1 Activator of 90 kDa heat shock protein ATPase homolog 1 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 81.365 80.836 3 4.1296E-34 93779 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 91.767 80.559 438350000 0 201960000 0 0 10440000 36672000 10861000 14921000 9314600 33858000 31592000 17813000 15771000 18344000 36803000 51029 661 45814 427985;427986;427987;427988;427989;427990;427991;427992;427993;427994;427995;427996;427997 338048;338049;338050;338051;338052;338053;338054;338055;338056;338057;338058;338059;338060;338061 338049 801;802 14 TEFTQGMILPTMNGESVDPVGQPALK Unmodified 2759.351 0.35100265 661 O95433 AHSA1 Activator of 90 kDa heat shock protein ATPase homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 3.8 3.12 3 1 1 3 1 1 92.399 89.328 2;3 4.9862E-127 110570 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.21 107.41 1282600000 0 1275000000 1654800 0 0 0 0 0 0 0 0 0 0 0 5959800 51030 661 45814 427998;427999;428000;428001;428002 338062;338063;338064;338065;338066;338067 338062 6 TEFTQGMILPTMNGESVDPVGQPALK Oxidation (M) 2775.3459 0.34591727 661 O95433 AHSA1 Activator of 90 kDa heat shock protein ATPase homolog 1 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 89.447 82.946 3 2.3262E-18 105510 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.192 54.872 504960000 4879000 500080000 0 0 0 0 0 0 0 0 0 0 0 0 0 51031 661 45814 428003;428004 338068;338069 338068 801;802 1 TEFVVDNGLNPVWPAK Unmodified 1784.9097 0.90973501 1083 P19174 PLCG1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 89.856 84.983 2 4.2091E-23 105571 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 158.56 134.71 116560000 0 116560000 0 0 0 0 0 0 0 0 0 0 0 0 0 51032 1083 45815 428005;428006 338070;338071 338070 2 TEFWLISAPGEK Acetyl (Protein N-term) 1418.7082 0.70818166 1122 P21283 ATP6V1C1 V-type proton ATPase subunit C 1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.24 2 1 10 2 1 1 1 1 1 1 1 1 1 1 1 96.342 95.561 2 7.7015E-06 111633 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.855 82.9 285800000 0 259800000 1896800 0 0 2866800 0 1429900 1411100 3976600 3538800 2401200 1303200 1841500 5333600 51033 1122 45816 428007;428008;428009;428010;428011;428012;428013;428014;428015;428016;428017;428018;428019 338072;338073;338074;338075;338076;338077;338078;338079;338080;338081;338082;338083;338084;338085;338086 338077 14 TEGAEATPGAQK Unmodified 1158.5517 0.55168102 2627 Q16666 IFI16 Gamma-interferon-inducible protein 16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 8.699 8.4833 2 2.3636E-05 7051 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 102.06 70.127 75722000 2950600 0 0 5990500 4034000 5664600 5169400 3742300 4643400 7071100 0 9622900 8881800 5651300 12300000 51034 2627 45817 428020;428021;428022;428023;428024;428025;428026;428027;428028;428029;428030;428031 338087;338088;338089;338090;338091;338092;338093;338094;338095;338096;338097;338098 338096 11 TEGCHIYLSEDALDCEIVSAK Unmodified 2409.0828 0.082826291 1408 P40123 CAP2 Adenylyl cyclase-associated protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 2 2 1 83.147 78.494 3 1.5968E-60 98573 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 126.26 120.49 41158000 15508000 13729000 11921000 0 0 0 0 0 0 0 0 0 0 0 0 51035 1408 45818 428032;428033;428034;428035;428036 338099;338100;338101;338102 338101 4 TEGDEEAEEEQEENLEASGDYK Unmodified 2499.9885 0.98851102 973 P12956 XRCC6 X-ray repair cross-complementing protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.17 3.47 2 3 18 3 2 2 2 2 1 2 2 2 2 1 2 54.324 53.991 2;3 4.2563E-280 55211 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 300.4 300.4 806850000 182790000 363120000 0 18550000 20690000 44660000 8621500 17774000 22576000 0 33287000 43517000 0 10701000 40569000 51036 973 45819 428037;428038;428039;428040;428041;428042;428043;428044;428045;428046;428047;428048;428049;428050;428051;428052;428053;428054;428055;428056;428057;428058;428059 338103;338104;338105;338106;338107;338108;338109;338110;338111;338112;338113;338114;338115;338116;338117;338118;338119;338120 338117 18 TEGDIFAIVSK Unmodified 1178.6183 0.61830402 3320 Q8N3C0 ASCC3 Activating signal cointegrator 1 complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 82.73 80.11 2 0.0052909 99547 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.944 48.56 44360000 992280 41724000 1643400 0 0 0 0 0 0 0 0 0 0 0 0 51037 3320 45820 428060;428061;428062;428063 338121;338122;338123;338124 338121 4 TEGEHDPVTEFIAHCK Unmodified 1868.8363 0.83631208 3258 Q8IXH7 NELFCD Negative elongation factor C/D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.25 5 19 1 2 2 1 2 1 2 2 2 2 2 2 1 2 66.893 65.98 3;4 5.1597E-58 87065 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 146.96 137 195530000 12063000 53215000 9135600 0 1206700 15776000 3441600 12032000 6305600 12250000 12611000 15971000 6674200 5988900 28862000 51038 3258 45821 428064;428065;428066;428067;428068;428069;428070;428071;428072;428073;428074;428075;428076;428077;428078;428079;428080;428081;428082;428083;428084;428085;428086;428087 338125;338126;338127;338128;338129;338130;338131;338132;338133;338134 338127 9 TEGISTSDIITR Unmodified 1291.662 0.66195975 1577 P49585 PCYT1A Choline-phosphate cytidylyltransferase A no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.705 56.828 2 2.7443E-05 63669 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 115.57 100.42 474720000 0 0 0 26213000 28890000 28777000 35209000 33504000 27345000 41015000 73513000 57877000 41633000 36067000 44674000 51039 1577 45822 428088;428089;428090;428091;428092;428093;428094;428095;428096;428097;428098;428099 338135;338136;338137;338138;338139;338140;338141;338142;338143;338144;338145;338146;338147;338148;338149 338145 13 TEGKPAEVK Unmodified 957.51311 0.51311067 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 6.9615 3.5996 2 0.00031422 5198 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 153.05 78.63 547730000 21567000 526160000 0 0 0 0 0 0 0 0 0 0 0 0 0 51040 1226 45823 428100;428101;428102 338150;338151 338151 2 TEGLVTCEK Unmodified 1035.4907 0.49066067 2567 Q15723 ELF2 ETS-related transcription factor Elf-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.95 22.156 2 0.0050681 23165 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 84.615 59.525 140520000 0 0 0 5425000 8593100 10077000 9783900 9643800 9779400 14002000 15204000 16908000 12991000 14884000 13231000 51041 2567 45824 428103;428104;428105;428106;428107;428108;428109;428110;428111;428112;428113;428114 338152;338153;338154;338155;338156;338157;338158;338159;338160;338161;338162 338154 11 TEGPSPALLEETPLEPAVGPK Unmodified 2131.1049 0.10486559 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 2 1 2 1 1 2 85.496 84.953 2;3 1.7722E-10 104927 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.85 82.46 150840000 0 98398000 0 0 3713200 5071500 0 0 0 8709300 3751600 11492000 3052500 4316500 12337000 51042 645 45825 428115;428116;428117;428118;428119;428120;428121;428122;428123;428124;428125;428126;428127 338163;338164;338165;338166;338167;338168;338169 338165 7 TEGRSVNHLCPTSSDSLASVCSPSQLK Unmodified 2916.3706 0.37056889 657 O95405 ZFYVE9 Zinc finger FYVE domain-containing protein 9 yes yes 0 0 1 By MS/MS 2 0 1 1 69.032 60.737 4 7.088E-15 81108 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.326 62.269 11733000 11733000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51043 657 45826 428128 338170 338170 1 TEGSDLCDRVSEMQK Unmodified 1753.7611 0.76109822 788 P04843 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 45.745 45.657 3 0.0005093 51074 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 57.267 50.228 48315000 0 0 0 6803100 7778800 7878200 0 0 8691400 0 17164000 0 0 0 0 51044 788 45827 428129;428130;428131;428132;428133 338171;338172;338173 338171 3 TEGSLEDWDIAVQK Unmodified 1589.7573 0.7573167 2475 Q15020 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 76.776 77.063 2 3.9168E-12 88474 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 125.74 108.51 18575000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18575000 51045 2475 45828 428134;428135;428136 338174;338175;338176 338176 3 TEGSSLRDLLHSGPGK Unmodified 1652.8482 0.84819739 3061 Q7LBC6 KDM3B Lysine-specific demethylase 3B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 56.664 56.951 3 0.0025319 64367 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 44.294 21.491 75567000 0 0 0 0 0 7309500 0 12709000 6748900 0 0 10429000 8949100 4372600 25049000 51046 3061 45829 428137;428138;428139;428140;428141;428142;428143 338177;338178;338179;338180;338181;338182;338183 338179 6 TEGSTAGAQIPSK Unmodified 1245.6201 0.62009493 2648 Q2KHR2 RFX7 DNA-binding protein RFX7 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching 10 0 7 1 1 1 1 1 1 1 22.889 23.168 2 0.032503 24392 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 42.743 31.592 16622000 0 0 0 0 0 0 2998100 2102100 2129600 1753600 3280600 2702400 0 1655100 0 51047 2648 45830 428144;428145;428146;428147;428148;428149;428150 338184;338185 338184 2 TEGYEAGLAPQR Unmodified 1290.6204 0.62042929 477 O75312 ZPR1 Zinc finger protein ZPR1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 41.036 36.159 2 0.00094109 47196 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.15 81.238 142980000 0 142980000 0 0 0 0 0 0 0 0 0 0 0 0 0 51048 477 45831 428151;428152 338186;338187 338186 2 TEHAEFLHCK Unmodified 1270.5765 0.57645598 1630 P50570 DNM2 Dynamin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 4 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22.972 21.963 2;3 0.0070091 21264 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 46.352 39.224 418730000 117420000 27511000 23508000 13313000 9448700 18340000 15833000 12717000 9665100 16160000 13316000 41024000 23768000 23082000 53627000 51049 1630 45832 428153;428154;428155;428156;428157;428158;428159;428160;428161;428162;428163;428164;428165;428166;428167;428168 338188;338189;338190;338191;338192;338193;338194;338195;338196;338197 338196 8 TEIDADFPHPLR Unmodified 1409.6939 0.69392858 4858 Q9UBT6 POLK DNA polymerase kappa yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 66.775 66.993 3 0.022396 76827 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 28.806 14.997 50178000 0 0 0 0 0 5487600 1929400 3762500 3813900 3925000 3134100 6015700 3431300 4487900 14190000 51050 4858 45833 428169;428170;428171;428172;428173;428174;428175;428176;428177;428178 338198 338198 1 TEIIILATR Unmodified 1028.623 0.62299547 1156 P23396 RPS3 40S ribosomal protein S3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.776 73.842 2 0.009002 84983 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 67.993 48.515 93111000 0 0 0 3849700 4438900 8733900 4438300 4070800 4841000 9173600 7609600 9441500 8935000 11230000 16348000 51051 1156 45834 428179;428180;428181;428182;428183;428184;428185;428186;428187;428188;428189;428190 338199;338200;338201;338202;338203;338204;338205;338206;338207;338208;338209;338210 338200 12 TEIIPDRDGSDPYQEPK Unmodified 1958.9222 0.92215019 4009 Q99447 PCYT2 Ethanolamine-phosphate cytidylyltransferase yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 55.407 49.117 3 0.0019955 60899 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 55.186 55.186 124230000 12875000 111360000 0 0 0 0 0 0 0 0 0 0 0 0 0 51052 4009 45835 428191;428192;428193 338211;338212;338213;338214 338213 4 TEIIVPEAEK Unmodified 1127.6074 0.60740498 3321 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 51.132 51.2 2 0.025045 57895 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 59.597 40.502 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51053 3321 45836 428194 338215 338215 1 TEIKEEEDQPSTSATQSSPAPGQSK Unmodified 2631.2148 0.21476298 2171 Q09472 EP300 Histone acetyltransferase p300 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 30.442 29.963 3 7.68E-141 32555 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 148.28 134.8 288240000 0 37319000 0 14293000 12147000 10300000 21225000 17511000 10837000 22037000 18864000 33339000 28970000 28284000 33114000 51054 2171 45837 428195;428196;428197;428198;428199;428200;428201;428202;428203;428204;428205;428206;428207;428208 338216;338217;338218;338219;338220;338221;338222;338223;338224;338225;338226;338227;338228;338229;338230;338231 338227 16 TEILAVNVDSK Unmodified 1187.6398 0.63976774 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.36 2.01 1 10 1 1 1 1 1 1 1 1 1 1 1 60.38 59.905 2 0.00010237 68321 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 127.4 66.808 33976000 0 3220900 0 3241200 0 4227200 0 3403000 0 6431900 0 5565400 0 3043400 4842900 51055 619 45838 428209;428210;428211;428212;428213;428214;428215;428216;428217;428218;428219 338232;338233;338234;338235;338236;338237;338238;338239;338240;338241;338242 338233 10 TEILDPDTLENQATVEFHSGDK Unmodified 2458.15 0.14997788 3631 Q92576 PHF3 PHD finger protein 3 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 85.201 81.197 3 0.0022477 97160 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 38.67 33.911 32334000 0 32334000 0 0 0 0 0 0 0 0 0 0 0 0 0 51056 3631 45839 428220;428221 338243;338244 338243 2 TEILPPFFK Unmodified 1090.6063 0.60628277 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 88.072 86.954 2 0.0056908 100491 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 77.058 11.806 1747600000 135670000 696250000 56854000 24180000 43271000 63898000 48125000 68382000 58434000 94098000 66241000 95993000 58990000 76833000 160380000 51057 516 45840 428222;428223;428224;428225;428226;428227;428228;428229;428230;428231;428232;428233;428234;428235;428236;428237 338245;338246;338247;338248;338249;338250;338251;338252;338253;338254;338255;338256;338257;338258;338259;338260;338261;338262;338263 338248 19 TEILSLEK Unmodified 931.52261 0.52261272 4306 Q9GZT8 NIF3L1 NIF3-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.8 3.92 2 3 1 1 1 1 1 55.926 53.624 2 0.0089419 60538 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 84.498 40.103 96452000 12755000 0 8430600 0 14009000 0 0 0 0 0 31271000 29986000 0 0 0 51058 4306 45841 428238;428239;428240;428241;428242 338264;338265;338266;338267;338268;338269;338270;338271;338272 338266 9 TEIMSPLYQDEAPK Unmodified 1620.7705 0.77052392 3277 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 68.591 68.747 2 0.0055742 79252 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 44.188 28.297 6314500 0 0 0 0 0 0 0 2596800 0 0 0 0 3717700 0 0 51059 3277 45842 428243;428244 338273;338274 338274 2 TEIQNIEFEPK Unmodified 1346.6718 0.67179615 2462 Q149N8 SHPRH E3 ubiquitin-protein ligase SHPRH yes yes 0 0 0 By MS/MS 2 0 1 1 69.192 63.323 2 0.008587 80788 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.557 39.831 10713000 0 10713000 0 0 0 0 0 0 0 0 0 0 0 0 0 51060 2462 45843 428245 338275 338275 1 TEIQTLFK Unmodified 978.5386 0.53859714 3358 Q8N6H7 ARFGAP2 ADP-ribosylation factor GTPase-activating protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 67.265 66.646 2 0.004651 74978 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 109.86 73.982 597650000 0 177700000 0 16417000 19330000 32165000 33691000 23783000 27642000 37815000 45149000 38611000 39885000 37717000 67746000 51061 3358 45844 428246;428247;428248;428249;428250;428251;428252;428253;428254;428255;428256;428257;428258;428259 338276;338277;338278;338279;338280;338281;338282;338283;338284;338285;338286;338287;338288;338289 338280 13 TEISEMNR Oxidation (M) 994.43896 0.43895945 67 CON__P05787;P05787;CON__Q9H552 KRT8 Keratin, type II cytoskeletal 8 yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 1 2 2 2 2 2 1 2 2 2 2 9.3488 9.4851 2 0.003652 7774 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 133.81 94.994 + 2038500000 0 0 0 171740000 105990000 152130000 195580000 132980000 115030000 172560000 149940000 298870000 218390000 123960000 201360000 51062 67 45845 428260;428261;428262;428263;428264;428265;428266;428267;428268;428269;428270;428271;428272;428273;428274;428275;428276;428277;428278;428279;428280;428281 338290;338291;338292;338293;338294;338295;338296;338297;338298;338299;338300;338301;338302;338303;338304;338305;338306;338307;338308;338309;338310;338311 338294 80 16 TEISEMNR Unmodified 978.44404 0.44404482 67 CON__P05787;P05787;CON__Q9H552 KRT8 Keratin, type II cytoskeletal 8 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 21.754 21.92 2 3.5138E-36 22664 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 186.43 136.39 + 4890400000 0 0 0 320720000 369640000 504710000 437380000 369540000 349220000 521120000 567190000 579210000 440140000 431560000 0 51063 67 45845 428282;428283;428284;428285;428286;428287;428288;428289;428290;428291;428292 338312;338313;338314;338315;338316;338317;338318;338319;338320;338321;338322;338323 338320 9 TEISEMNRNISR Unmodified 1448.7042 0.70417569 67 CON__P05787;P05787 KRT8 Keratin, type II cytoskeletal 8 yes no 0 0 1 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 37.411 34.103 3 0.001735 46915 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.153 47.759 + 32812000 11638000 0 17872000 0 0 0 0 0 3301300 0 0 0 0 0 0 51064 67 45846 428293;428294;428295 338324;338325;338326 338325 2 TEISEMNRNISRLQAEIEGLK Unmodified 2430.2537 0.25367186 67 CON__P05787;P05787 KRT8 Keratin, type II cytoskeletal 8 yes no 0 0 2 By MS/MS 3 0 1 1 90.111 86.897 4 0.0037496 104024 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 23.447 20.049 + 3057200 0 3057200 0 0 0 0 0 0 0 0 0 0 0 0 0 51065 67 45847 428296 338327 338327 1 TEISVESK Unmodified 891.45493 0.45492709 2884 Q6IBS0 TWF2 Twinfilin-2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 22.631 18.202 2 0.027071 24074 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.77 32.755 63294000 9940000 53353000 0 0 0 0 0 0 0 0 0 0 0 0 0 51066 2884 45848 428297;428298 338328;338329 338328 2 TEITELRR Unmodified 1016.5615 0.56145784 73;981 CON__P13646-1;P13646;CON__ENSEMBL:ENSP00000377550 KRT13 Keratin, type I cytoskeletal 13 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 26.685 26.99 2 0.0062391 29341 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 133.55 57.694 + 244760000 0 0 0 0 0 0 74131000 112430000 0 0 0 33052000 25143000 0 0 51067 73;981 45849 428299;428300;428301;428302 338330;338331;338332 338330 1 TEIVFTGEK Unmodified 1022.5284 0.52842638 2033 Q00341 HDLBP Vigilin yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 46.414 46.449 2 0.0039854 52369 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 97.635 51.917 55981000 0 0 0 7051600 0 10285000 6460100 7977000 0 12070000 0 0 12136000 0 0 51068 2033 45850 428303;428304;428305;428306;428307;428308;428309 338333;338334;338335;338336;338337 338333 5 TELAEPIAIRPTSETVMYPAYAK Oxidation (M) 2566.2989 0.29889072 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 78.767 77.71 3 1.3915E-34 89562 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 103.27 99.081 2490100000 60954000 884400000 144260000 21426000 53618000 143460000 59396000 103600000 87855000 184130000 136540000 167030000 65058000 112350000 265980000 51069 848 45851 428310;428311;428312;428313;428314;428315;428316;428317;428318;428319;428320;428321;428322;428323;428324;428325;428326 338338;338339;338340;338341;338342;338343;338344;338345;338346;338347;338348;338349;338350;338351;338352;338353;338354;338355 338345 1061 18 TELAEPIAIRPTSETVMYPAYAK Unmodified 2550.304 0.3039761 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 82.178 81.015 3 1.7557E-46 101417 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.08 95.022 1827300000 59665000 1368600000 94297000 0 6417600 19401000 5832500 19870000 11740000 29291000 26933000 32382000 8459400 16065000 128330000 51070 848 45851 428327;428328;428329;428330;428331;428332;428333;428334;428335;428336;428337;428338;428339;428340;428341 338356;338357;338358;338359;338360;338361;338362;338363;338364;338365;338366;338367;338368;338369;338370 338359 15 TELDAHFENLLAR Unmodified 1527.7682 0.76815616 4592 Q9NR46 SH3GLB2 Endophilin-B2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 2 78.413 78.517 2;3 0.00058725 90871 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 68.034 62.428 148440000 0 0 0 0 3178500 11994000 4372700 14877000 12508000 14302000 9900200 15236000 10585000 10360000 41131000 51071 4592 45852 428342;428343;428344;428345;428346;428347;428348;428349;428350;428351;428352;428353 338371;338372;338373;338374;338375;338376;338377;338378;338379;338380;338381 338381 11 TELDAHFENLLARADSTK Unmodified 2030.0069 0.006882877 4592 Q9NR46 SH3GLB2 Endophilin-B2 yes yes 0 0 1 By MS/MS 3 0 1 1 82.291 79.019 4 0.046868 94675 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 26.808 21.599 6398900 0 6398900 0 0 0 0 0 0 0 0 0 0 0 0 0 51072 4592 45853 428354 338382 338382 1 TELDAHLENLLSK Unmodified 1481.7726 0.77257283 5139 Q9Y371 SH3GLB1 Endophilin-B1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.72 2.93 4 21 1 2 1 2 2 1 2 2 2 2 2 2 2 2 77.795 77.082 2;3 0.00090639 88996 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 68.515 44.134 551280000 13712000 202510000 7102000 0 7964900 21500000 6158000 28963000 20444000 37622000 34548000 33894000 26524000 23286000 87061000 51073 5139 45854 428355;428356;428357;428358;428359;428360;428361;428362;428363;428364;428365;428366;428367;428368;428369;428370;428371;428372;428373;428374;428375;428376;428377;428378;428379 338383;338384;338385;338386;338387;338388;338389;338390;338391;338392;338393;338394;338395;338396;338397;338398;338399 338398 14 TELDILK Unmodified 830.47493 0.47493425 2827 Q5VWZ2 LYPLAL1 Lysophospholipase-like protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS 2 0 3 1 1 1 65.354 59.363 2 0.035514 75945 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.244 7.3971 132170000 5771000 123540000 2859000 0 0 0 0 0 0 0 0 0 0 0 0 51074 2827 45855 428380;428381;428382 338400 338400 1 TELDSFLIEITANILK Unmodified 1818.9979 0.99788132 1680 P52209 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0.535 1 5 1 3 2 2 105.41 101.07 2;3 1.2048E-292 95775 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 255.41 227.23 167870000 127300000 37169000 3400500 0 0 0 0 0 0 0 0 0 0 0 0 51075 1680 45856 428383;428384;428385;428386;428387;428388;428389 338401;338402;338403;338404;338405;338406 338404 5 TELEDTLDSTAAQQELR Unmodified 1918.912 0.91197944 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.21 2.31 2 2 34 4 2 3 2 3 4 3 3 3 2 3 3 3 70.535 70.122 2;3 3.604E-255 81477 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 238.13 215.22 7864800000 0 324250000 0 326440000 587110000 732800000 620750000 431860000 480850000 640360000 719740000 967190000 758700000 545730000 729050000 51076 1356 45857 428390;428391;428392;428393;428394;428395;428396;428397;428398;428399;428400;428401;428402;428403;428404;428405;428406;428407;428408;428409;428410;428411;428412;428413;428414;428415;428416;428417;428418;428419;428420;428421;428422;428423;428424;428425;428426;428427 338407;338408;338409;338410;338411;338412;338413;338414;338415;338416;338417;338418;338419;338420;338421;338422;338423;338424;338425;338426;338427;338428;338429;338430;338431;338432;338433;338434;338435;338436;338437;338438;338439;338440 338432 26 TELEDTLDSTAAQQELRSK Unmodified 2134.039 0.038970866 1356 P35579 MYH9 Myosin-9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching 4.83 3.67 3 1 2 1 2 1 1 1 68.547 64.872 3 1.6332E-77 80156 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 164.68 155.89 1037600000 117160000 862330000 52290000 0 0 0 0 0 3969700 0 0 0 0 1814300 0 51077 1356 45858 428428;428429;428430;428431;428432;428433 338441;338442;338443;338444;338445;338446 338446 6 TELEDTLDTTAAQQELR Unmodified 1932.9276 0.9276295 1357 P35580 MYH10 Myosin-10 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 72.715 72.565 2 4.4965E-08 83832 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 91.914 76.024 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51078 1357 45859 428434;428435 338447;338448 338448 2 TELESLK Unmodified 818.43855 0.43854874 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 29.494 29.617 2 0.025177 30867 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.297 26.51 41550000 0 0 0 2641600 0 5352200 6249600 5991000 0 8219200 0 0 0 0 13097000 51079 2291 45860 428436;428437;428438;428439;428440;428441 338449;338450;338451;338452 338452 4 TELGSQTPESSR Unmodified 1290.6052 0.60517315 4474 Q9H9L4 KANSL2 KAT8 regulatory NSL complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.869 20.072 2 1.3684E-05 20689 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 107.24 37.29 57586000 0 0 0 3760300 4026500 3394400 3338700 5760500 2583200 4257200 6213300 5944900 4855800 4656400 8795200 51080 4474 45861 428442;428443;428444;428445;428446;428447;428448;428449;428450;428451;428452;428453 338453;338454;338455;338456;338457;338458;338459;338460;338461 338461 9 TELGSQTPESSRSEASR Unmodified 1820.85 0.85004788 4474 Q9H9L4 KANSL2 KAT8 regulatory NSL complex subunit 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.76 19.964 3 8.6443E-05 20655 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 72.417 24.306 66878000 0 0 0 2911500 3093700 3882900 6893500 5357300 4441800 4983600 6294300 8355500 6210100 6813900 7639400 51081 4474 45862 428454;428455;428456;428457;428458;428459;428460;428461;428462;428463;428464;428465 338462;338463;338464;338465;338466;338467;338468;338469;338470;338471;338472 338462 11 TELHGQLISVEK Unmodified 1352.73 0.72997974 4697 Q9NWH9 SLTM SAFB-like transcription modulator yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 46.968 47.082 3 0.0031809 53611 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 41.825 26.286 130470000 0 0 0 12984000 9576100 18065000 10984000 7675000 8004000 14447000 12879000 16647000 10124000 9086900 0 51082 4697 45863 428466;428467;428468;428469;428470;428471;428472;428473;428474;428475;428476 338473;338474;338475;338476;338477;338478 338478 6 TELISVSEVHPSR Unmodified 1452.7573 0.75725712 1448 P42224 STAT1 Signal transducer and activator of transcription 1-alpha/beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 1 2 1 1 2 1 1 1 1 2 55.201 55.364 2;3 0.00028736 62814 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 67.275 59.364 158340000 0 0 0 5805100 6014200 16666000 12289000 8082800 7871200 21553000 14267000 19619000 9581900 9129300 27464000 51083 1448 45864 428477;428478;428479;428480;428481;428482;428483;428484;428485;428486;428487;428488;428489;428490;428491 338479;338480;338481;338482;338483;338484;338485;338486;338487;338488;338489;338490;338491 338485 12 TELLGEETPMAADEGSAEK Unmodified 1976.8885 0.8884668 4469 Q9H9B1 EHMT1 Histone-lysine N-methyltransferase EHMT1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 65.215 65.261 2 3.1243E-12 74750 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 111.39 87.402 46406000 0 0 0 2678300 3402100 3876800 3742900 3603700 3231900 4365700 4278700 6735500 5178900 5311900 0 51084 4469 45865 428492;428493;428494;428495;428496;428497;428498;428499;428500;428501;428502 338492;338493;338494;338495;338496;338497;338498;338499 338494 8 TELLGEETPMAADEGSAEK Oxidation (M) 1992.8834 0.88338143 4469 Q9H9B1 EHMT1 Histone-lysine N-methyltransferase EHMT1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 54.427 54.418 2 4.9245E-05 62204 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 61.641 55.796 14218000 0 0 0 0 2513100 0 3365500 0 0 4760900 0 0 3578400 0 0 51085 4469 45865 428503;428504;428505;428506;428507;428508 338500;338501;338502;338503 338503 5909 4 TELLQRPGIEDVAVLK Unmodified 1780.0094 0.0094490594 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 5.4 3.77 2 1 2 2 1 1 1 80.634 78.618 3 0.001466 89835 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.729 1.9824 179950000 0 130830000 15913000 0 0 0 0 7905700 0 0 0 0 0 0 25292000 51086 2495 45866 428509;428510;428511;428512;428513 338504;338505;338506 338504 3 TELLVDRDEEVK Unmodified 1444.7409 0.74093835 4503 Q9HBU6 ETNK1 Ethanolamine kinase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 6.12 3.89 3 1 4 1 2 1 1 1 1 1 46.61 43.932 3 0.0057409 54922 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 76.332 42.331 102570000 21446000 52206000 3859000 0 0 5694700 0 0 0 4984500 7642600 0 6739300 0 0 51087 4503 45867 428514;428515;428516;428517;428518;428519;428520;428521 338507;338508;338509;338510 338509 3 TELNSSAESEQPLDK Unmodified 1646.7635 0.76352429 5229 Q9Y5B6 PAXBP1 PAX3- and PAX7-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.455 36.635 2 3.7663E-23 39205 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 122.42 67.813 46856000 0 0 0 2353600 2398900 2746700 2919700 2858500 2944900 2983200 3142900 6016100 5360700 6412000 6719300 51088 5229 45868 428522;428523;428524;428525;428526;428527;428528;428529;428530;428531;428532;428533 338511;338512;338513;338514;338515;338516;338517;338518;338519;338520;338521 338517 11 TELPLGAR Unmodified 855.48142 0.48141661 2147 Q08050 FOXM1 Forkhead box protein M1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 42.868 43.482 2 0.04249 47557 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.59 22.469 32228000 0 0 0 0 0 0 0 0 0 0 0 16057000 6999900 0 9171400 51089 2147 45869 428534;428535;428536 338522;338523 338522 2 TELPVTENVQTIPPPYVVR Unmodified 2151.1576 0.15756986 4704 Q9NWV8 BABAM1 BRISC and BRCA1-A complex member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 2 1 1 1 83.755 83.834 3 0.00017686 97142 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 53.21 48.558 58367000 0 0 0 0 4925400 5886400 0 8255500 0 0 10131000 0 10568000 5970400 12630000 51090 4704 45870 428537;428538;428539;428540;428541;428542;428543;428544 338524;338525;338526;338527;338528 338524 5 TELQGLIGQLDEVSLEK Unmodified 1870.9888 0.9887732 4983 Q9UL15 BAG5 BAG family molecular chaperone regulator 5 yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 96.616 92.348 2;3 1.1143E-06 114393 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.35 114.07 44603000 0 44603000 0 0 0 0 0 0 0 0 0 0 0 0 0 51091 4983 45871 428545;428546;428547 338529;338530 338529 2 TELQNTLR Unmodified 973.51926 0.51925868 1132 P22059 OSBP Oxysterol-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 31.297 30.756 2 0.0074056 32150 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.752 45.06 124910000 0 8209800 1484800 0 5690400 15712000 9146400 0 8104000 16009000 16217000 14472000 0 11763000 18104000 51092 1132 45872 428548;428549;428550;428551;428552;428553;428554;428555;428556;428557;428558 338531;338532;338533;338534;338535;338536 338533 6 TELQNTLRTLSSK Unmodified 1489.81 0.81002097 1132 P22059 OSBP Oxysterol-binding protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 71.916 63.678 3 0.0030022 84539 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.798 53.006 51879000 51879000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51093 1132 45873 428559 338537 338537 1 TELQQIGK Unmodified 915.50255 0.50254598 2792 Q5TAX3 ZCCHC11 Terminal uridylyltransferase 4 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 27.477 27.651 2 0.012727 29841 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 73.975 26.059 13252000 0 0 0 0 0 0 6858500 0 0 0 0 0 0 6393800 0 51094 2792 45874 428560;428561 338538 338538 1 TELQQLIQQK Unmodified 1227.6823 0.68230126 4024 Q99570 PIK3R4 Phosphoinositide 3-kinase regulatory subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 65.592 65.191 2 0.00058056 73900 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 130.28 73.62 133510000 0 64981000 0 3040100 3297500 5998600 0 5439900 3867200 7384100 5649100 9366400 5486000 7187700 11810000 51095 4024 45875 428562;428563;428564;428565;428566;428567;428568;428569;428570;428571;428572;428573;428574 338539;338540;338541;338542;338543;338544;338545;338546;338547;338548;338549;338550;338551;338552;338553 338544 13 TELQSALLLR Acetyl (Protein N-term) 1184.6765 0.6764876 1880 P62253 UBE2G1 Ubiquitin-conjugating enzyme E2 G1;Ubiquitin-conjugating enzyme E2 G1, N-terminally processed yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 90.377 90.431 2 0.0018857 104940 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 79.474 58.954 27844000 0 0 0 1483700 1154100 4044600 2175900 1440800 1418400 5075400 0 0 2135000 2922200 5994000 51096 1880 45876 428575;428576;428577;428578;428579;428580;428581;428582;428583;428584 338554 338554 1 TELQSALLLRR Acetyl (Protein N-term) 1340.7776 0.77759863 1880 P62253 UBE2G1 Ubiquitin-conjugating enzyme E2 G1;Ubiquitin-conjugating enzyme E2 G1, N-terminally processed yes yes 1 0 1 By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.26 82.321 2 0.0024159 94939 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.692 47.912 69814000 0 0 0 1297200 1641900 7490200 3730000 2687200 2668900 8517700 7756000 7830400 3222300 7386900 15585000 51097 1880 45877 428585;428586;428587;428588;428589;428590;428591;428592;428593;428594;428595;428596 338555;338556 338556 2 TELSERELAVAVAVSQENDEENEERWVGPLPVEATLAK Unmodified 4207.0921 0.092075655 3762 Q96BP3 PPWD1 Peptidylprolyl isomerase domain and WD repeat-containing protein 1 yes yes 0 0 2 By MS/MS 2 0 1 1 96.867 88.737 4 5.8237E-42 114652 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.923 76.607 25389000 25389000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51098 3762 45878 428597 338557 338557 1 TELSMPIQSHVIMTPQSQSAGR 2 Oxidation (M) 2429.1679 0.16789332 1055 P17544 ATF7 Cyclic AMP-dependent transcription factor ATF-7 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 56.676 56.874 3 5.9431E-27 64620 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 96.79 82.021 103880000 0 0 0 0 11786000 13039000 13148000 0 0 9875800 12170000 16223000 11669000 6522500 9444400 51099 1055 45879 428598;428599;428600;428601;428602;428603;428604;428605;428606 338558;338559;338560;338561;338562;338563;338564;338565;338566;338567;338568;338569 338558 1479;1480 12 TELSMPIQSHVIMTPQSQSAGR Unmodified 2397.1781 0.17806408 1055 P17544 ATF7 Cyclic AMP-dependent transcription factor ATF-7 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 75.393 75.494 3 2.6752E-13 86667 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.99 65.278 53292000 0 0 0 0 2520800 5593700 1577100 4962700 3318300 5079200 5248200 0 2824500 6140400 16027000 51100 1055 45879 428607;428608;428609;428610;428611;428612;428613;428614;428615;428616 338570;338571;338572;338573;338574;338575;338576 338572 6 TELSMPIQSHVIMTPQSQSAGR Oxidation (M) 2413.173 0.1729787 1055 P17544 ATF7 Cyclic AMP-dependent transcription factor ATF-7 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 70.478 70.721 3 8.086E-17 81200 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 82.975 52.292 34368000 0 0 0 0 0 0 0 11624000 0 10039000 0 0 0 0 12705000 51101 1055 45879 428617;428618;428619;428620 338577;338578;338579;338580 338580 1479;1480 3 TELSPAQIK Unmodified 985.54441 0.5444108 3081 Q7Z3B4 NUP54 Nucleoporin p54 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.611 38.79 2 0.0043077 43032 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 87.251 45.949 210560000 0 0 0 9588400 11185000 14999000 17159000 17659000 9067300 18363000 19201000 24046000 21520000 16514000 31259000 51102 3081 45880 428621;428622;428623;428624;428625;428626;428627;428628;428629;428630;428631;428632 338581;338582;338583;338584;338585;338586;338587;338588;338589 338582 7 TELSQSDMFDQR Oxidation (M) 1471.6249 0.62492232 1902 P62495 ETF1 Eukaryotic peptide chain release factor subunit 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.68 1.57 1 24 1 2 2 2 2 2 2 2 2 2 2 2 2 37.428 37.608 2 1.7524E-05 40984 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 99.973 90.286 310360000 0 0 0 13858000 16322000 30454000 21867000 17962000 12782000 28904000 34420000 38844000 35327000 22727000 36888000 51103 1902 45881 428633;428634;428635;428636;428637;428638;428639;428640;428641;428642;428643;428644;428645;428646;428647;428648;428649;428650;428651;428652;428653;428654;428655;428656;428657 338590;338591;338592;338593;338594;338595;338596;338597;338598;338599;338600;338601;338602;338603;338604;338605;338606;338607;338608;338609;338610 338598 3079 21 TELSQSDMFDQR Unmodified 1455.63 0.63000769 1902 P62495 ETF1 Eukaryotic peptide chain release factor subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 53.851 53.989 2 1.2729E-10 60936 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 145.89 131.21 364480000 0 0 0 16954000 19054000 42809000 19785000 21778000 18248000 39679000 31460000 31902000 34009000 28940000 59868000 51104 1902 45881 428658;428659;428660;428661;428662;428663;428664;428665;428666;428667;428668;428669 338611;338612;338613;338614;338615;338616;338617;338618;338619;338620;338621;338622;338623;338624;338625;338626 338618 16 TELSQSDMFDQRLQSK Oxidation (M) 1927.8946 0.89455524 1902 P62495 ETF1 Eukaryotic peptide chain release factor subunit 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 1 3 2 52.025 46.634 2;3 7.4692E-39 63247 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 137.19 129.28 355210000 25953000 256620000 72637000 0 0 0 0 0 0 0 0 0 0 0 0 51105 1902 45882 428670;428671;428672;428673;428674;428675 338627;338628;338629;338630;338631;338632;338633 338632 3079 7 TELSQSDMFDQRLQSK Unmodified 1911.8996 0.89964061 1902 P62495 ETF1 Eukaryotic peptide chain release factor subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 65.189 59.51 3 3.0346E-07 76408 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.78 91.497 531370000 38267000 420810000 72296000 0 0 0 0 0 0 0 0 0 0 0 0 51106 1902 45882 428676;428677;428678;428679 338634;338635;338636;338637;338638;338639 338634 6 TELTQIK Unmodified 831.47018 0.47018322 4972 Q9UKM9 RALY RNA-binding protein Raly yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 28.882 28.234 2 0.020877 36450 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 111.28 11.359 360990000 0 226080000 2318500 0 9154900 11768000 9979600 0 9418100 19052000 0 21256000 26692000 25272000 0 51107 4972 45883 428680;428681;428682;428683;428684;428685;428686;428687;428688;428689 338640;338641;338642;338643;338644;338645;338646;338647;338648 338643 9 TEMDWVLK Unmodified 1020.495 0.49501776 1692 P52597 HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 73.295 73.473 2 0.011381 84574 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 77.058 62.282 107120000 0 0 0 0 0 11509000 0 10041000 7784500 0 0 12992000 14341000 21765000 28686000 51108 1692 45884 428690;428691;428692;428693;428694;428695;428696;428697 338649;338650;338651;338652;338653;338654;338655;338656 338653 8 TEMEDLMSSK 2 Oxidation (M) 1201.4843 0.48425466 1356 P35579 MYH9 Myosin-9 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.23 12.379 2 0.0007095 11212 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 85.731 73.505 196830000 0 0 0 9971100 16318000 20321000 18181000 12212000 14566000 20130000 16346000 20672000 23952000 11008000 13149000 51109 1356 45885 428698;428699;428700;428701;428702;428703;428704;428705;428706;428707;428708;428709 338657;338658;338659;338660;338661;338662;338663;338664;338665;338666;338667;338668;338669;338670;338671;338672;338673 338664 2090;2091 17 TEMEDLMSSK Oxidation (M) 1185.4893 0.48934004 1356 P35579 MYH9 Myosin-9 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 33 3 3 3 3 3 2 2 2 3 3 3 3 27.165 27.358 2 0.00092253 28977 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 91.584 78.757 467340000 0 0 0 33647000 43434000 56027000 37619000 26002000 17128000 37435000 35014000 69520000 43102000 29879000 38529000 51110 1356 45885 428710;428711;428712;428713;428714;428715;428716;428717;428718;428719;428720;428721;428722;428723;428724;428725;428726;428727;428728;428729;428730;428731;428732;428733;428734;428735;428736;428737;428738;428739;428740;428741;428742 338674;338675;338676;338677;338678;338679;338680;338681;338682;338683;338684;338685;338686;338687;338688;338689;338690;338691;338692;338693;338694;338695;338696;338697;338698;338699;338700;338701;338702;338703;338704;338705 338698 2090;2091 31 TEMEDLMSSK Unmodified 1169.4944 0.49442542 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.676 49.832 2 0.0029289 56314 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 88.267 71.727 1294300000 0 0 0 87661000 88832000 115860000 92128000 72082000 73078000 111830000 111060000 153870000 106340000 106690000 174830000 51111 1356 45885 428743;428744;428745;428746;428747;428748;428749;428750;428751;428752;428753;428754 338706;338707;338708;338709;338710;338711;338712;338713;338714;338715;338716;338717;338718 338709 13 TEMEDLMSSKDDVGK 2 Oxidation (M) 1715.723 0.72298138 1356 P35579 MYH9 Myosin-9 yes yes 0 2 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 20.814 21.118 3 4.2245E-10 21923 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 93.823 89.721 118850000 0 0 0 13295000 0 7085900 0 0 9839300 0 15678000 32615000 21090000 10283000 8968700 51112 1356 45886 428755;428756;428757;428758;428759;428760;428761;428762 338719;338720;338721;338722;338723;338724;338725 338725 2090;2091 7 TEMEDLMSSKDDVGK Unmodified 1683.7332 0.73315214 1356 P35579 MYH9 Myosin-9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 52.375 52.526 3 9.9526E-05 58566 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 70.98 66.8 167800000 0 0 0 14225000 17632000 0 19035000 21212000 0 16788000 14070000 18278000 16747000 14303000 15508000 51113 1356 45886 428763;428764;428765;428766;428767;428768;428769;428770;428771;428772 338726;338727;338728;338729;338730;338731;338732;338733;338734;338735;338736 338734 11 TEMEDLMSSKDDVGK Oxidation (M) 1699.7281 0.72806676 1356 P35579 MYH9 Myosin-9 yes yes 0 1 1 By MS/MS By matching By matching By MS/MS By matching 10 0 5 1 1 1 1 1 34.909 35.153 3 0.0015468 38301 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 43.316 40.954 56882000 0 0 0 0 8929500 0 0 0 0 14808000 10637000 18480000 0 4027200 0 51114 1356 45886 428773;428774;428775;428776;428777 338737;338738 338737 2090;2091 2 TEMEIAMK Unmodified 951.44054 0.44053935 3998 Q96T51 RUFY1 RUN and FYVE domain-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 47.904 42.341 2 0.047117 55130 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.626 57.888 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51115 3998 45887 428778 338739 338739 1 TEMENEFVLIK Oxidation (M) 1367.6643 0.66426794 67 CON__P05787;P05787;CON__H-INV:HIT000016045 KRT8 Keratin, type II cytoskeletal 8 yes no 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 71.297 71.477 2 0.0045269 82050 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.461 28.331 + 177110000 0 0 0 0 0 0 0 12546000 28623000 30141000 0 58645000 28667000 18486000 0 51116 67 45888 428779;428780;428781;428782;428783;428784 338740;338741;338742;338743;338744 338744 79 1 TEMENEFVLIK Unmodified 1351.6694 0.66935331 67 CON__P05787;P05787;CON__H-INV:HIT000016045 KRT8 Keratin, type II cytoskeletal 8 yes no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 78.775 78.791 2 0.0022147 91578 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 68.735 28.69 + 46689000 0 0 0 3300100 0 0 0 0 0 4400800 0 17679000 0 0 21308000 51117 67 45888 428785;428786;428787;428788;428789 338745;338746 338745 2 TEMENEFVLIKK Oxidation (M) 1495.7592 0.75923095 67 CON__P05787;P05787;CON__H-INV:HIT000016045 KRT8 Keratin, type II cytoskeletal 8 yes no 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 55.887 56.215 3 0.0021285 63835 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 48.568 36.562 + 37785000 0 0 0 0 0 0 10787000 0 0 0 12050000 0 0 7500100 7448400 51118 67 45889 428790;428791;428792;428793 338747 338747 79 1 TEMIDQEEGIS Oxidation (M) 1266.5286 0.52856232 4031 Q99598 TSNAX Translin-associated protein X yes yes 0 1 0 By MS/MS 1 0 1 1 95.564 100.83 2 0.00039802 79589 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 104.44 100.28 18554000 18554000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51119 4031 45890 428794 338748;338749 338749 5533 2 TEMIDQEEGIS Unmodified 1250.5336 0.53364769 4031 Q99598 TSNAX Translin-associated protein X yes yes 0 0 0 By MS/MS 1 0 1 1 101.99 102.88 2 0.0039524 94000 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 81.594 69.747 4712000 0 4712000 0 0 0 0 0 0 0 0 0 0 0 0 0 51120 4031 45890 428795 338750 338750 1 TEMQDNTYPEILR Oxidation (M) 1624.7403 0.74028642 295 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 61.168 61.204 2 8.1336E-13 69075 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 125.75 115.22 68972000 0 0 0 6254000 5335700 6192600 5328400 5848100 4829500 8490700 0 0 7523900 8361500 10808000 51121 295 45891 428796;428797;428798;428799;428800;428801;428802;428803;428804;428805 338751;338752;338753;338754;338755;338756;338757;338758;338759;338760;338761 338755 379 11 TEMQDNTYPEILR Unmodified 1608.7454 0.7453718 295 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.494 68.573 2 2.0479E-16 77873 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 174.73 148.22 116770000 0 0 0 3549600 3869300 4700400 4972500 7105900 5250000 9760500 14132000 12271000 13158000 11806000 26200000 51122 295 45891 428806;428807;428808;428809;428810;428811;428812;428813;428814;428815;428816;428817 338762;338763;338764;338765;338766;338767;338768;338769;338770;338771;338772;338773 338765 12 TEMQNMIELSR Unmodified 1350.6272 0.62717092 4639 Q9NTZ6 RBM12 RNA-binding protein 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.57 67.652 2 0.00029439 76781 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 103.26 82.555 77191000 0 0 0 5161200 3127600 5678300 4511000 5916200 3940700 6586800 5503400 5766800 5216500 7270300 18512000 51123 4639 45892 428818;428819;428820;428821;428822;428823;428824;428825;428826;428827;428828;428829 338774;338775;338776;338777;338778;338779;338780;338781;338782;338783;338784;338785 338777 11 TEMQNMIELSR 2 Oxidation (M) 1382.617 0.61700017 4639 Q9NTZ6 RBM12 RNA-binding protein 12 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 34.375 34.405 2 0.001258 38338 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 62.823 52.299 30413000 0 0 0 3853100 2349300 3331500 4631800 3108500 3365900 4216800 0 0 2797400 2758500 0 51124 4639 45892 428830;428831;428832;428833;428834;428835;428836;428837;428838 338786;338787;338788;338789;338790;338791;338792 338791 6052;6053 7 TEMQNMIELSR Oxidation (M) 1366.6221 0.62208554 4639 Q9NTZ6 RBM12 RNA-binding protein 12 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 46.97 47.27 2 0.0039194 51968 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.785 45.738 25064000 0 0 0 0 0 6319500 0 0 0 4466400 0 0 0 4591500 9686800 51125 4639 45892 428839;428840;428841;428842 338793 338793 6052;6053 1 TEMSEVLTEILR Oxidation (M) 1435.7228 0.72284545 346 O43615 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 83.549 83.549 2 6.6922E-06 96593 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 108.67 98.714 33358000 0 0 0 1829800 3112500 0 4494400 9202100 0 0 0 0 6892400 0 7826800 51126 346 45893 428843;428844;428845;428846;428847;428848;428849;428850;428851 338794;338795;338796;338797;338798;338799;338800;338801;338802 338797 431 9 TENATGPSSCPQR Unmodified 1403.6099 0.60994095 3962 Q96QT6 PHF12 PHD finger protein 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 10.459 10.525 2 0.0058523 8998 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.284 43.343 6476200 0 0 0 675740 605140 0 818260 0 765700 0 0 1983400 1628000 0 0 51127 3962 45894 428852;428853;428854;428855;428856;428857 338803;338804;338805 338805 3 TENDHINLK Unmodified 1082.5356 0.53563702 1775 P55854 SUMO3 Small ubiquitin-related modifier 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 6 4 3 3 1 1 1 1 1 1 21.034 19.281 2 1.2096E-06 26093 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 163.32 78.107 232160000 23580000 184160000 6132300 0 0 0 0 0 0 2482500 0 3390900 0 0 12415000 51128 1775 45895 428858;428859;428860;428861;428862;428863 338806;338807;338808;338809 338806 4 TENGTCPSPPQPLSPAAALGSGSAAAVPK Unmodified 2732.3439 0.34394343 2212 Q12948 FOXC1 Forkhead box protein C1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.512 78.569 3 0.0066102 90996 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 19.985 17.207 164620000 0 0 0 8935200 8717700 9939800 11915000 14680000 9674800 18101000 14283000 16454000 10193000 16290000 25440000 51129 2212 45896 428864;428865;428866;428867;428868;428869;428870;428871;428872;428873;428874;428875 338810 338810 1 TENLLGSYFPK Unmodified 1267.6449 0.64485312 2127 Q06323 PSME1 Proteasome activator complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 81.807 80.472 2 3.0028E-08 93164 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 133.81 112.94 3613400000 88493000 2951300000 65289000 9284300 11473000 35403000 19678000 22767000 16196000 57424000 54125000 64885000 26131000 40076000 150930000 51130 2127 45897 428876;428877;428878;428879;428880;428881;428882;428883;428884;428885;428886;428887;428888;428889;428890;428891;428892 338811;338812;338813;338814;338815;338816;338817;338818;338819;338820;338821;338822;338823;338824;338825;338826;338827 338821 14 TENNDHINLK Unmodified 1196.5786 0.57856447 1862 P61956 SUMO2 Small ubiquitin-related modifier 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.88 3.83 8 2 15 3 5 2 1 1 1 1 1 1 2 2 1 2 2 19.469 18.254 2;3 6.9643E-22 25523 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 197.86 134.3 4590600000 451670000 3132700000 256250000 12360000 14886000 9963000 0 13342000 10897000 18420000 125250000 120570000 14714000 98794000 310810000 51131 1862 45898 428893;428894;428895;428896;428897;428898;428899;428900;428901;428902;428903;428904;428905;428906;428907;428908;428909;428910;428911;428912;428913;428914;428915;428916;428917 338828;338829;338830;338831;338832;338833;338834;338835;338836;338837;338838;338839;338840;338841;338842;338843;338844;338845;338846;338847;338848;338849;338850;338851;338852;338853;338854;338855;338856 338835 21 TENPGDASDLQGR Unmodified 1358.6062 0.60623578 399 O60437 PPL Periplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 24.32 24.382 2 6.4519E-05 25836 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 104.79 99.807 18981000 0 0 0 4339300 1738400 0 3007800 5314100 0 0 0 0 0 0 4581100 51132 399 45899 428918;428919;428920;428921;428922;428923;428924;428925;428926 338857;338858;338859;338860;338861;338862;338863;338864;338865 338858 8 TENPLILIDEVDK Unmodified 1497.7926 0.79263957 1379 P36776 LONP1 Lon protease homolog, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 90.773 89.657 2 4.358E-06 112552 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 115.33 90.11 327340000 9156200 264550000 3724600 609820 1447500 5376200 1607800 2572100 2267200 8337300 4685300 4586900 2466800 5341500 10610000 51133 1379 45900 428927;428928;428929;428930;428931;428932;428933;428934;428935;428936;428937;428938;428939;428940;428941;428942 338866;338867;338868;338869;338870;338871;338872;338873;338874;338875;338876;338877;338878;338879;338880;338881;338882 338874 17 TENSILRK Unmodified 959.53999 0.53999412 4598 Q9NRF8 CTPS2 CTP synthase 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 17.981 14.489 2 0.011444 21458 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 133.6 70.886 280410000 257530000 0 22878000 0 0 0 0 0 0 0 0 0 0 0 0 51134 4598 45901 428943;428944 338883 338883 0 TENSLANENQQPIK Unmodified 1584.7744 0.77436375 3457 Q8NHM5 KDM2B Lysine-specific demethylase 2B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 32.307 32.469 2 0.001991 35734 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 67.726 52.154 24164000 0 0 0 2465100 2116000 2005000 2557800 1943700 1998500 0 0 2411400 3315700 2139000 3211600 51135 3457 45902 428945;428946;428947;428948;428949;428950;428951;428952;428953;428954 338884;338885;338886;338887;338888;338889 338884 6 TENSLVGLPSCVDEVTECNLELK Unmodified 2605.2251 0.22513343 3631 Q92576 PHF3 PHD finger protein 3 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 91.379 87.317 3 5.1792E-109 108408 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.34 108.45 59622000 0 59622000 0 0 0 0 0 0 0 0 0 0 0 0 0 51136 3631 45903 428955;428956 338890 338890 1 TENTLERNK Unmodified 1103.5571 0.55710075 3631 Q92576 PHF3 PHD finger protein 3 yes yes 0 0 1 By MS/MS 2 0 1 1 7.2956 4.0525 2 0.00546 6354 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.42 90.168 17271000 0 17271000 0 0 0 0 0 0 0 0 0 0 0 0 0 51137 3631 45904 428957 338891 338891 1 TENTRLGDNRK Unmodified 1302.664 0.66402543 78 CON__P20930;P20930 FLG Filaggrin yes no 0 0 2 By MS/MS 2 0 1 1 7.0624 3.6302 3 0.037477 6746 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.499 32.1 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51138 78 45905 428958 338892 338892 1 TEPAAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQAR Unmodified 4457.0531 0.053123966 1776 P55884 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 72.104 72.142 4 6.0926E-77 83286 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 75.957 72.519 240730000 0 0 0 8643600 15448000 20479000 23683000 15630000 14646000 26176000 27124000 32263000 24534000 32100000 0 51139 1776 45906 428959;428960;428961;428962;428963;428964;428965;428966;428967;428968;428969 338893;338894;338895;338896;338897;338898;338899;338900;338901;338902;338903;338904;338905 338902 13 TEPATGFIDGDLIESFLDISRPK Unmodified 2520.2748 0.27478446 2608 Q16531 DDB1 DNA damage-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 6 2 4 3 1 101.06 95.666 3;4 6.8177E-56 120563 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 128.98 122.1 401370000 314600000 85417000 1353300 0 0 0 0 0 0 0 0 0 0 0 0 51140 2608 45907 428970;428971;428972;428973;428974;428975;428976;428977 338906;338907;338908;338909;338910;338911;338912;338913 338912 8 TEPEEVSIEDSAQSDLK Unmodified 1875.8585 0.85854688 2627 Q16666 IFI16 Gamma-interferon-inducible protein 16 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.584 60.689 2 1.3997E-41 68647 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 190.85 176.59 151900000 0 0 0 8120100 6629000 10520000 11681000 9007400 7986100 14746000 17063000 12924000 14179000 11476000 27573000 51141 2627 45908 428978;428979;428980;428981;428982;428983;428984;428985;428986;428987;428988;428989 338914;338915;338916;338917;338918;338919;338920;338921;338922;338923;338924;338925 338918 10 TEPEPPSVK Unmodified 982.49713 0.49712625 2489 Q15054 POLD3 DNA polymerase delta subunit 3 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 26.842 27.09 2 0.022744 28932 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 51.346 23.821 102530000 0 0 0 0 8197300 8956900 11412000 4821400 0 9400900 16372000 9249800 10213000 10316000 13587000 51142 2489 45909 428990;428991;428992;428993;428994;428995;428996;428997;428998;428999 338926;338927;338928 338927 3 TEPETPGPSCLSQEGQTAVK Unmodified 2114.979 0.97901315 5000 Q9ULM3 YEATS2 YEATS domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 53.609 54.185 2 1.2951E-05 61086 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.628 52.524 16006000 0 0 0 0 0 0 0 0 0 0 7172000 5779800 0 0 3054000 51143 5000 45910 429000;429001;429002 338929;338930 338930 2 TEPLTPNPASK Unmodified 1153.5979 0.59790293 2670 Q3L8U1 CHD9 Chromodomain-helicase-DNA-binding protein 9 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 30.045 30.2 2 0.008135 31508 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.278 20.344 26920000 0 0 0 0 2980500 2732000 3732600 0 1992100 4642600 4193000 0 0 0 6647200 51144 2670 45911 429003;429004;429005;429006;429007;429008;429009 338931;338932;338933 338932 3 TEPPSSEPISFIPVK Unmodified 1626.8505 0.8504888 4439 Q9H7Z3 NRDE2 Protein NRDE2 homolog yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 81.617 81.66 2 0.0056522 94462 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 45.879 12.013 21108000 0 0 0 1917200 0 2705000 2410100 0 0 3006600 6112400 4074300 882630 0 0 51145 4439 45912 429010;429011;429012;429013;429014;429015;429016 338934;338935;338936;338937 338934 4 TEPSIAEYTVR Unmodified 1264.6299 0.62993134 2254 Q13217 DNAJC3 DnaJ homolog subfamily C member 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 57.18 57.297 2 0.031237 65738 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 38.303 19.864 131370000 0 0 0 11919000 9804300 0 12015000 0 0 11775000 18136000 21630000 11557000 8970200 25564000 51146 2254 45913 429017;429018;429019;429020;429021;429022;429023;429024;429025 338938 338938 1 TEPSIAEYTVRSK Unmodified 1479.7569 0.75692277 2254 Q13217 DNAJC3 DnaJ homolog subfamily C member 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.33 0.471 2 1 1 1 1 53.08 47.425 3 0.0011276 59393 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 77.078 64.913 33822000 6780300 3029100 24012000 0 0 0 0 0 0 0 0 0 0 0 0 51147 2254 45914 429026;429027;429028 338939;338940;338941;338942;338943 338943 5 TEPSSPLSDPSDIIR Unmodified 1612.7944 0.79443049 4997 Q9ULJ3 ZBTB21 Zinc finger and BTB domain-containing protein 21 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.324 74.385 2 0.00070334 85678 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 78.692 70.282 127220000 0 0 0 7406100 8141300 6990800 10744000 7438500 9159800 11615000 12096000 13952000 13057000 12851000 13765000 51148 4997 45915 429029;429030;429031;429032;429033;429034;429035;429036;429037;429038;429039;429040 338944;338945;338946;338947;338948;338949;338950;338951;338952;338953;338954;338955;338956 338944 10 TEPSVFTASSSNSELIR Unmodified 1823.8901 0.89012178 3893 Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.428 72.488 2 1.8957E-32 83362 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 124.38 94.441 141920000 0 0 0 8118300 5232900 19400000 10481000 0 6421500 20532000 14353000 17861000 9108500 9295000 21117000 51149 3893 45916 429041;429042;429043;429044;429045;429046;429047;429048;429049;429050;429051;429052 338957;338958;338959;338960;338961;338962;338963;338964;338965;338966;338967;338968;338969;338970;338971 338969 15 TEPTAQQNLALQLAEK Unmodified 1753.921 0.92102798 4033 Q99613;B5ME19 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 1 2 2 2 2 2 2 72.035 72.1 2;3 5.5629E-29 83554 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 142.91 127.52 461130000 0 0 0 21780000 23771000 34913000 29633000 24907000 19777000 46506000 59410000 51922000 39565000 48001000 60943000 51150 4033 45917 429053;429054;429055;429056;429057;429058;429059;429060;429061;429062;429063;429064;429065;429066;429067;429068;429069;429070;429071;429072;429073;429074;429075 338972;338973;338974;338975;338976;338977;338978;338979;338980;338981;338982;338983;338984;338985;338986;338987;338988;338989 338987 14 TEPTEDSGISLEMAAVTVK Oxidation (M) 1992.9562 0.95615244 1977 P78347 GTF2I General transcription factor II-I yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.64 2.9 2 2 18 1 3 1 1 2 1 1 2 2 2 2 2 1 1 74.502 73.804 2;3 1.9821E-53 85226 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 148.52 122.4 731160000 1205900 114200000 0 28220000 39954000 53768000 34800000 20903000 43188000 77618000 60340000 112690000 65892000 33539000 44844000 51151 1977 45918 429076;429077;429078;429079;429080;429081;429082;429083;429084;429085;429086;429087;429088;429089;429090;429091;429092;429093;429094;429095;429096;429097 338990;338991;338992;338993;338994;338995;338996;338997;338998;338999;339000;339001;339002;339003;339004;339005;339006;339007;339008;339009;339010 339001 3188 16 TEPTEDSGISLEMAAVTVK Unmodified 1976.9612 0.96123782 1977 P78347 GTF2I General transcription factor II-I yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 82.723 81.608 2 5.6367E-96 100795 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 192.39 170.37 537040000 51921000 270680000 1701800 5565300 13304000 11875000 8834700 14111000 9803700 33106000 26925000 23781000 9708600 14747000 40968000 51152 1977 45918 429098;429099;429100;429101;429102;429103;429104;429105;429106;429107;429108;429109;429110;429111;429112;429113 339011;339012;339013;339014;339015;339016;339017;339018;339019;339020;339021;339022;339023;339024;339025;339026 339014 16 TEPTSPTPSAFK Unmodified 1261.619 0.6190323 3198 Q86XN7 PROSER1 Proline and serine-rich protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.176 41.355 2 1.0889E-05 45944 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 98.249 62.305 274480000 0 0 0 15407000 16675000 17527000 19199000 26499000 13897000 25608000 26509000 42245000 26118000 18178000 26614000 51153 3198 45919 429114;429115;429116;429117;429118;429119;429120;429121;429122;429123;429124;429125 339027;339028;339029;339030;339031;339032;339033;339034;339035;339036;339037;339038;339039;339040;339041 339034 15 TEPVSGEENSPDISATR Unmodified 1787.8174 0.81735077 3132 Q86T82 USP37 Ubiquitin carboxyl-terminal hydrolase 37 yes yes 0 0 0 By MS/MS 10 0 1 1 39.216 39.679 2 0.0001212 43907 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 64.65 55.462 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51154 3132 45920 429126 339042 339042 1 TEQDLALGTDAEGQK Unmodified 1574.7424 0.74239491 125 O00186 STXBP3 Syntaxin-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 41.617 41.777 2 0.00011396 46590 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 84.169 68.554 13047000 0 0 0 0 0 4302300 0 0 0 5863800 0 0 0 2880800 0 51155 125 45921 429127;429128;429129 339043;339044 339044 2 TEQEALEYFMK Unmodified 1387.633 0.63296781 1452 P42336 PIK3CA Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform yes yes 0 0 0 By MS/MS 2 0 1 1 83.946 79.225 2 1.0479E-06 98531 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.88 95.901 19327000 0 19327000 0 0 0 0 0 0 0 0 0 0 0 0 0 51156 1452 45922 429130 339045 339045 1 TEQEDVLAK Unmodified 1031.5135 0.5135046 2159 Q08499 PDE4D cAMP-specific 3',5'-cyclic phosphodiesterase 4D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.538 23.742 2 0.0034358 23887 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 106.04 61.595 193080000 0 0 0 8840400 8644100 11699000 10295000 7346200 6962600 15788000 19829000 21632000 28617000 22021000 31411000 51157 2159 45923 429131;429132;429133;429134;429135;429136;429137;429138;429139;429140;429141;429142 339046;339047;339048;339049;339050;339051;339052;339053;339054;339055 339047 8 TEQEEDEELLTESSK Unmodified 1765.7741 0.77414855 389 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes yes 0 0 0 By MS/MS 10 0 1 1 48.929 48.987 2 8.8969E-05 55331 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 79.82 73.131 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51158 389 45924 429143 339056 339056 1 TEQETLLLSTACPPTQEHPLPNDR Unmodified 2746.3232 0.32320799 3964 Q96R06 SPAG5 Sperm-associated antigen 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.048 75.107 3 3.7981E-73 86667 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 124.86 117.58 151910000 0 0 0 3817600 7481000 11887000 10254000 13475000 7651800 14563000 13673000 22873000 10825000 11947000 23460000 51159 3964 45925 429144;429145;429146;429147;429148;429149;429150;429151;429152;429153;429154;429155 339057;339058;339059;339060;339061;339062;339063;339064;339065;339066;339067;339068;339069 339067 13 TEQEVDIILPQFSK Unmodified 1645.8563 0.85630246 3215 Q8IUC4 RHPN2 Rhophilin-2 yes yes 0 0 0 By MS/MS 2 0 1 1 90.126 85.23 2 0.0023581 106048 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.48 62.523 15537000 0 15537000 0 0 0 0 0 0 0 0 0 0 0 0 0 51160 3215 45926 429156 339070;339071 339071 2 TEQGPQVDETQFK Unmodified 1505.6998 0.69980182 796 P05091 ALDH2 Aldehyde dehydrogenase, mitochondrial yes yes 0 0 0 By MS/MS 10 0 1 1 42.154 41.637 2 6.8269E-08 46978 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 103.22 92.697 12162000 0 0 0 12162000 0 0 0 0 0 0 0 0 0 0 0 51161 796 45927 429157 339072 339072 1 TEQLEQLK Unmodified 987.52368 0.52367535 2240 Q13137 CALCOCO2 Calcium-binding and coiled-coil domain-containing protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 35.653 30.806 2 0.016419 40234 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.187 55.486 18446000 0 18446000 0 0 0 0 0 0 0 0 0 0 0 0 0 51162 2240 45928 429158 339073 339073 1 TEQLYSQK Unmodified 995.49238 0.49237523 416 O60583 CCNT2 Cyclin-T2 yes yes 0 0 0 By MS/MS 10 0 1 1 16.985 17.266 2 0.040979 17301 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 50.127 27.504 1721600 0 0 0 0 0 0 0 0 0 0 0 0 1721600 0 0 51163 416 45929 429159 339074 339074 1 TEQMTLR Acetyl (Protein N-term) 919.44332 0.44331654 1950 P63244 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 1 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 45.571 45.756 2 0.026308 51071 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 47.849 30.922 60161000 0 0 0 5846400 0 0 1740200 0 0 0 11861000 0 0 10704000 30009000 51164 1950 45930 429160;429161;429162;429163;429164 339075 339075 1 TEQMTLRGTLK Acetyl (Protein N-term);Oxidation (M) 1334.6864 0.68640036 1950 P63244 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 1 1 1 By MS/MS By MS/MS By MS/MS 2 0 4 1 2 1 45.954 41.665 2 0.0025887 54264 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.894 36.51 220460000 34046000 174650000 11770000 0 0 0 0 0 0 0 0 0 0 0 0 51165 1950 45931 429165;429166;429167;429168 339076;339077;339078 339076 3134 3 TEQMTLRGTLK Acetyl (Protein N-term) 1318.6915 0.69148574 1950 P63244 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 1 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 63.054 57.367 2 1.056E-16 76735 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 166.97 129.82 256990000 39216000 204910000 12863000 0 0 0 0 0 0 0 0 0 0 0 0 51166 1950 45931 429169;429170;429171;429172 339079;339080;339081;339082 339081 2 TEQQESDSVQCMPVAK Unmodified 1835.803 0.80296304 3966 Q96RE7 NACC1 Nucleus accumbens-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.813 39.992 2 1.1494E-35 43408 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 153.63 147.79 111900000 0 0 0 6866500 5680300 8227000 6440900 6282700 6223900 11024000 12108000 14279000 10859000 9266200 14643000 51167 3966 45932 429173;429174;429175;429176;429177;429178;429179;429180;429181;429182;429183;429184 339083;339084;339085;339086;339087;339088;339089;339090;339091;339092;339093;339094 339086 12 TEQQESDSVQCMPVAK Oxidation (M) 1851.7979 0.79787766 3966 Q96RE7 NACC1 Nucleus accumbens-associated protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 24.142 24.233 2 0.00023638 25241 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 65.395 62.055 19393000 0 0 0 2359800 1621500 2516800 2330400 0 1861500 0 0 0 3237400 0 5465300 51168 3966 45932 429185;429186;429187;429188;429189;429190;429191 339095 339095 5451 1 TEQQTADQLLAR Unmodified 1372.6947 0.69465686 933 P11047 LAMC1 Laminin subunit gamma-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 12.029 12.092 3 0.015748 11157 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 28.903 5.7855 19294000 0 0 0 2278300 938190 1536600 3248500 1833800 1083400 2524600 0 0 3381500 2469100 0 51169 933 45933 429192;429193;429194;429195;429196;429197;429198;429199;429200 339096;339097;339098;339099 339096 4 TEQSLAGPK Unmodified 929.48181 0.48181054 4741 Q9NYD6 HOXC10 Homeobox protein Hox-C10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 14.084 14.273 2 0.0062061 12802 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 75.692 29.74 102620000 0 0 0 0 7238200 10196000 0 0 5112400 15995000 15718000 0 14540000 11878000 21948000 51170 4741 45934 429201;429202;429203;429204;429205;429206;429207;429208 339100;339101;339102;339103;339104;339105 339105 3 TEQSVALLEQK Unmodified 1244.6612 0.66123147 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS By MS/MS 5 3.56 1 1 1 2 1 52.704 49.16 2 0.00031009 56125 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 102.06 52.248 62380000 0 52612000 0 0 0 9768300 0 0 0 0 0 0 0 0 0 51171 5049 45935 429209;429210;429211 339106;339107;339108 339106 3 TERASAQQENSSTCIGSAIK Unmodified 2137.007 0.0069592315 4733 Q9NXV6 CDKN2AIP CDKN2A-interacting protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 38.478 33.471 3 1.2139E-12 43742 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.234 85.411 75343000 6193600 36647000 32502000 0 0 0 0 0 0 0 0 0 0 0 0 51172 4733 45936 429212;429213;429214 339109;339110;339111;339112 339109 4 TERDTPGHGSGWAETPR Unmodified 1852.8452 0.84523728 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 2 2 2 2 2 1 2 2 2 26.512 26.728 3;4 1.9334E-06 28754 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 79.837 69.352 339140000 0 0 0 0 16312000 31860000 24721000 25260000 23704000 28848000 26731000 29845000 33365000 44094000 54395000 51173 516 45937 429215;429216;429217;429218;429219;429220;429221;429222;429223;429224;429225;429226;429227;429228;429229;429230;429231;429232;429233;429234;429235 339113;339114;339115;339116;339117;339118;339119;339120;339121;339122;339123;339124;339125;339126;339127;339128;339129 339114 12 TERDTPGHGSGWAETPRTDR Unmodified 2225.021 0.020969812 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 2 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 25.397 25.71 4 4.6886E-11 26326 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 65.855 60.853 160400000 0 0 0 0 0 13531000 2204700 0 13241000 15327000 21753000 16836000 27692000 18026000 31786000 51174 516 45938 429236;429237;429238;429239;429240;429241;429242;429243;429244 339130;339131;339132;339133;339134;339135;339136;339137 339135 8 TEREQFVEFR Unmodified 1339.6521 0.65206377 376 O43852 CALU Calumenin yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.944 48.106 3 0.00062919 53482 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 91.215 73.401 238830000 0 0 0 6466900 6855400 7149500 7366900 8621300 9124600 13424000 37871000 36220000 18302000 23352000 64075000 51175 376 45939 429245;429246;429247;429248;429249;429250;429251;429252;429253;429254;429255;429256 339138;339139;339140;339141;339142;339143;339144;339145;339146;339147;339148 339146 11 TEREQFVEFRDK Unmodified 1582.774 0.77396981 376 O43852 CALU Calumenin yes yes 0 0 2 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.16 2.46 2 17 1 1 1 1 2 1 1 1 2 2 2 2 2 39.821 39.396 3;4 0.004886 57640 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.756 74.336 456910000 77427000 21705000 0 0 3110100 6582000 11590000 10047000 6028900 7834800 62613000 74502000 20949000 42683000 111840000 51176 376 45940 429257;429258;429259;429260;429261;429262;429263;429264;429265;429266;429267;429268;429269;429270;429271;429272;429273;429274;429275 339149;339150;339151;339152;339153;339154 339152 4 TERPVNSAALSPNYDHVVLGGGQEAMDVTTTSTR Unmodified 3572.7165 0.71653788 2273 Q13347 EIF3I Eukaryotic translation initiation factor 3 subunit I yes yes 0 0 1 By MS/MS 10 0 1 1 75.063 75.374 4 1.4492E-49 86458 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.909 71.244 15936000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15936000 51177 2273 45941 429276 339155 339155 1 TERPVNSAALSPNYDHVVLGGGQEAMDVTTTSTR Oxidation (M) 3588.7115 0.7114525 2273 Q13347 EIF3I Eukaryotic translation initiation factor 3 subunit I yes yes 0 1 1 By MS/MS By matching 10 0 2 1 1 69.368 69.789 4 1.007E-45 80157 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 66.902 61.794 24782000 0 0 0 0 0 0 0 0 0 0 0 13806000 0 0 10976000 51178 2273 45941 429277;429278 339156 339156 3706 0 TERTGIMQLK Unmodified 1175.6332 0.63324258 1494 P46020 PHKA1 Phosphorylase b kinase regulatory subunit alpha, skeletal muscle isoform yes yes 0 0 1 By MS/MS 2 0 1 1 45.442 38.45 3 0.015134 52800 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.37 28.897 19314000 19314000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51179 1494 45942 429279 339157 339157 1 TERTIQQNITEQASVMQK Unmodified 2104.0583 0.058266521 3893 Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 yes yes 0 0 1 By MS/MS 2 0 1 1 63.653 57.746 3 0.00043713 73996 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 59.372 49.842 19366000 0 19366000 0 0 0 0 0 0 0 0 0 0 0 0 0 51180 3893 45943 429280 339158 339158 1 TERTIQQNITEQASVMQK Oxidation (M) 2120.0532 0.053181143 3893 Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 yes yes 0 1 1 By MS/MS 2 0 1 1 47.303 43.422 3 1.321E-05 54664 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 86.455 76.497 5509500 0 0 5509500 0 0 0 0 0 0 0 0 0 0 0 0 51181 3893 45943 429281 339159;339160 339160 5395 2 TESASVQGRNTDVAQSPEAPK Unmodified 2171.0455 0.045453228 4817 Q9P2E9 RRBP1 Ribosome-binding protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 33.693 29.05 3 0.02926 38099 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 25.083 19.874 6019100 0 6019100 0 0 0 0 0 0 0 0 0 0 0 0 0 51182 4817 45944 429282 339161;339162 339162 2 TESAVSQMQSVIELGR Oxidation (M) 1749.8567 0.85671317 1441 P41252 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 0 1 0 By MS/MS 10 0 1 1 61.649 61.646 2 0.0042776 70494 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 40.287 27.306 3326800 0 0 0 0 0 3326800 0 0 0 0 0 0 0 0 0 51183 1441 45945 429283 339163 339163 2269 1 TESAVSQMQSVIELGR Unmodified 1733.8618 0.86179854 1441 P41252 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 82.931 83.076 2 3.64E-24 95806 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 123.95 99.962 16266000 0 0 0 0 0 0 0 0 0 4463600 0 0 0 0 11802000 51184 1441 45945 429284;429285 339164;339165 339165 2 TESGAQALGNELVK Unmodified 1415.7256 0.72562264 4258 Q9BZ29 DOCK9 Dedicator of cytokinesis protein 9 yes yes 0 0 0 By MS/MS 2 0 1 1 62.382 56.489 2 1.9655E-09 72449 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.66 93.824 36870000 0 36870000 0 0 0 0 0 0 0 0 0 0 0 0 0 51185 4258 45946 429286 339166 339166 1 TESGYGSESSLRR Unmodified 1427.6641 0.66408501 5242 Q9Y5P4 COL4A3BP Collagen type IV alpha-3-binding protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 19.691 19.894 3 0.0028375 19250 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.204 23.621 26414000 0 0 0 3237200 1609200 3002500 3246500 0 0 0 3850000 4370800 2779100 0 4318400 51186 5242 45947 429287;429288;429289;429290;429291;429292;429293;429294 339167;339168;339169;339170;339171 339168 5 TESNQEVANPEHYIK Unmodified 1757.822 0.82204222 826 P06730 EIF4E Eukaryotic translation initiation factor 4E yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.7 3.52 2 1 7 1 2 1 1 1 1 1 1 1 49.282 47.649 3 0.00017942 53683 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 72.175 61.388 1095800000 23961000 686330000 0 0 0 64073000 0 42045000 24477000 81555000 2731200 77111000 0 0 93559000 51187 826 45948 429295;429296;429297;429298;429299;429300;429301;429302;429303;429304 339172;339173;339174;339175;339176;339177;339178;339179;339180 339175 4 TESPATAAETASEELDNR Unmodified 1890.8443 0.8442938 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 1 2 2 2 2 2 2 3 2 2 2 1 66.274 66.373 2;3 4.1425E-37 75884 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 134.21 120.8 181790000 0 0 0 4846100 11369000 20386000 13547000 13135000 11462000 20267000 21431000 19884000 17857000 16957000 10653000 51188 4634 45949 429305;429306;429307;429308;429309;429310;429311;429312;429313;429314;429315;429316;429317;429318;429319;429320;429321;429322;429323;429324;429325;429326;429327 339181;339182;339183;339184;339185;339186;339187;339188;339189;339190;339191;339192;339193;339194;339195 339188 8 TESSLLAK Unmodified 847.4651 0.46509784 1331 P33981 TTK Dual specificity protein kinase TTK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.532 24.733 2 0.011381 26285 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 77.058 34.058 239550000 0 0 0 15109000 16924000 16768000 19889000 17351000 13391000 20085000 24938000 24522000 23608000 22146000 24818000 51189 1331 45950 429328;429329;429330;429331;429332;429333;429334;429335;429336;429337;429338;429339 339196;339197;339198;339199;339200;339201;339202;339203;339204;339205 339202 9 TESSPSEASQHSMQSPQK Unmodified 1944.8483 0.84833332 5073 Q9UQR0 SCML2 Sex comb on midleg-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 17.249 16.878 3 2.2669E-05 15417 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.437 52.015 73867000 0 29476000 0 2252900 3210500 3957700 2652000 2987700 2862600 2681200 4439800 4574500 4932100 4752000 5087700 51190 5073 45951 429340;429341;429342;429343;429344;429345;429346;429347;429348;429349;429350;429351;429352;429353 339206;339207;339208;339209;339210;339211;339212;339213;339214;339215;339216 339211 11 TESSPSEASQHSMQSPQK Oxidation (M) 1960.8432 0.84324795 5073 Q9UQR0 SCML2 Sex comb on midleg-like protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 8.3771 8.4401 3 0.00018128 6872 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 51.495 33.795 15084000 0 0 0 0 1835500 1546000 1803900 1758800 1689100 0 0 6450900 0 0 0 51191 5073 45951 429354;429355;429356;429357;429358;429359 339217 339217 6451 1 TESSSAQQVAVSR Unmodified 1348.6583 0.65827136 1189 P25440 BRD2 Bromodomain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 19.746 19.964 2 6.9584E-05 20612 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 101.95 89.907 32286000 0 0 0 4120000 0 2297800 4185900 0 0 4815100 4188900 0 3627500 3009800 6041400 51192 1189 45952 429360;429361;429362;429363;429364;429365;429366;429367;429368 339218;339219;339220;339221;339222;339223;339224;339225 339219 8 TESSTEGK Unmodified 837.37159 0.37159139 1473 P43243 MATR3 Matrin-3 yes yes 0 0 0 By MS/MS 1 0 1 1 106.71 111.97 2 0.018072 92728 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 89.296 61.078 26547000 26547000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51193 1473 45953 429369 339226 339226 1 TESTPITAVK Unmodified 1045.5655 0.56554017 5267 Q9Y678 COPG1 Coatomer subunit gamma-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 33.362 33.563 2 0.044161 37342 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 38.754 14.599 179720000 0 0 0 0 0 29231000 20572000 19683000 13321000 25071000 23915000 0 27127000 20798000 0 51194 5267 45954 429370;429371;429372;429373;429374;429375;429376;429377 339227 339227 1 TESVLIK Unmodified 788.46437 0.46436956 3663 Q92797 SYMPK Symplekin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 31.514 31.756 2 0.032282 34965 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 73.039 18.514 155340000 0 0 0 7617000 0 10388000 13768000 11780000 8231100 17779000 13271000 21743000 18345000 11255000 21164000 51195 3663 45955 429378;429379;429380;429381;429382;429383;429384;429385;429386;429387;429388 339228;339229 339228 2 TETAPLVVVVSTTGTGDPPDTARK Unmodified 2411.2544 0.25438337 4844 Q9UBK8 MTRR Methionine synthase reductase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 77.122 75.994 3 1.2719E-55 87322 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.903 88.978 221310000 32385000 73613000 15759000 2970700 2468100 13187000 4169400 3938800 2820900 12458000 11783000 11292000 3907100 8319000 22243000 51196 4844 45956 429389;429390;429391;429392;429393;429394;429395;429396;429397;429398;429399;429400;429401;429402;429403;429404 339230;339231;339232;339233;339234;339235;339236;339237;339238;339239;339240;339241;339242;339243;339244;339245;339246;339247;339248 339234 19 TETDSVGTPQSNGGMR Unmodified 1635.7159 0.71586259 4329 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.216 26.416 2 1.5322E-10 27996 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 122.7 118.4 100180000 0 0 0 3002700 7451900 9175300 6172800 6390600 4712500 7179600 18835000 11511000 8067000 6833100 10849000 51197 4329 45957 429405;429406;429407;429408;429409;429410;429411;429412;429413;429414;429415;429416 339249;339250;339251;339252;339253;339254;339255;339256;339257;339258;339259 339254 11 TETDSVGTPQSNGGMR Oxidation (M) 1651.7108 0.71077721 4329 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 17.428 17.543 2 3.0183E-06 16890 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 80.979 74.596 24785000 0 0 0 3377500 0 3848600 3400100 3338600 0 3599800 0 7220400 0 0 0 51198 4329 45957 429417;429418;429419;429420;429421;429422 339260 339260 5794 1 TETEFPDEDEETR Unmodified 1596.6427 0.64274045 3823 Q96EV2 RBM33 RNA-binding protein 33 yes yes 0 0 0 By MS/MS 10 0 1 1 38.841 39.131 2 0.0053475 42456 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 65.719 62.187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51199 3823 45958 429423 339261 339261 1 TETEFPDEDEETRLYR Unmodified 2028.8912 0.891244 3823 Q96EV2 RBM33 RNA-binding protein 33 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 59.67 60.046 3 4.8237E-06 67709 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.69 75.154 35302000 0 0 0 0 0 5848100 0 0 0 0 0 10888000 0 0 18566000 51200 3823 45959 429424;429425;429426;429427;429428 339262;339263;339264;339265;339266 339263 5 TETEFPDEDEETRLYRLK Unmodified 2270.0703 0.070270995 3823 Q96EV2 RBM33 RNA-binding protein 33 yes yes 0 0 2 By MS/MS 2 0 1 1 74.78 66.649 3 7.2077E-07 88117 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.609 71.993 11714000 11714000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51201 3823 45960 429429 339267 339267 1 TETEPVFWYYVK Unmodified 1560.75 0.75004648 3517 Q8TEQ0 SNX29 Sorting nexin-29 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 87.218 87.371 2 0.0003821 101141 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.033 83.875 11087000 0 0 0 0 0 1693100 0 1669100 0 0 2067000 0 0 0 5657800 51202 3517 45961 429430;429431;429432;429433 339268 339268 1 TETGATETVTPSEAPVLAAEPEADK Unmodified 2513.2021 0.20207303 3402 Q8NBS9 TXNDC5 Thioredoxin domain-containing protein 5 yes yes 0 0 0 By MS/MS 10 0 1 1 70.856 71.291 3 1.1811E-09 81339 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.32 31.249 8873200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8873200 51203 3402 45962 429434 339269 339269 1 TETILPPESENPK Unmodified 1453.73 0.73003931 4365 Q9H2G2 SLK STE20-like serine/threonine-protein kinase yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 1 2 54.06 48.254 2 3.508E-18 62565 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 158.79 147.96 22242000 0 22242000 0 0 0 0 0 0 0 0 0 0 0 0 0 51204 4365 45963 429435;429436;429437 339270;339271;339272;339273;339274;339275 339272 6 TETLASLEDTK Unmodified 1206.598 0.59796251 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 2 1 6 1 2 1 1 1 1 1 1 53.399 50.071 2 4.6013E-05 64223 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.5 73.509 350090000 0 327430000 0 0 0 0 0 0 0 0 0 0 0 0 22659000 51205 1286 45964 429438;429439;429440;429441;429442;429443;429444;429445;429446 339276;339277;339278;339279;339280;339281;339282;339283;339284;339285 339277 10 TETMNVVMETNK 2 Oxidation (M) 1427.6272 0.6272305 965 P12270 TPR Nucleoprotein TPR yes yes 0 2 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 2 1 1 1 1 2 1 2 19.777 19.999 2 0.00026694 20825 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 73.985 66.06 31733000 0 0 0 2832300 1619000 2623800 0 0 0 4179700 4247200 7598700 2695400 0 5936700 51206 965 45965 429447;429448;429449;429450;429451;429452;429453;429454;429455;429456;429457 339286;339287;339288;339289;339290;339291;339292 339291 1266;1267 7 TETMNVVMETNK Oxidation (M) 1411.6323 0.63231588 965 P12270 TPR Nucleoprotein TPR yes yes 0 1 0 By MS/MS 2 0 2 2 38.508 33.541 2 0.00071558 43786 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.827 81.469 18730000 0 18730000 0 0 0 0 0 0 0 0 0 0 0 0 0 51207 965 45965 429458;429459 339293;339294 339293 1266;1267 2 TETMNVVMETNK Unmodified 1395.6374 0.63740126 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS 2 0 1 1 53.065 47.273 2 0.0028076 61039 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.17 90.958 108620000 0 108620000 0 0 0 0 0 0 0 0 0 0 0 0 0 51208 965 45965 429460 339295 339295 1 TETMTVSSLAIRK Unmodified 1435.7705 0.77046434 4397 Q9H4G0 EPB41L1 Band 4.1-like protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 65.038 56.749 3 0.025279 76337 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 35.037 35.037 12127000 12127000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51209 4397 45966 429461 339296;339297 339297 2 TETNGGQVTYR Unmodified 1224.5735 0.57347909 2590 Q15853 USF2 Upstream stimulatory factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 16.351 16.532 2 0.041545 16416 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 36.585 7.415 32983000 0 0 0 2285100 1434500 3414700 2227500 0 1612300 2850000 3451900 4120700 2957200 3065300 5564400 51210 2590 45967 429462;429463;429464;429465;429466;429467;429468;429469;429470;429471;429472 339298 339298 1 TETPPPLASLNVSK Unmodified 1452.7824 0.78240924 2673 Q3MHD2 LSM12 Protein LSM12 homolog yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.182 71.256 2 0.015428 81241 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.998 40.779 44529000 0 0 0 2572000 2533200 2019300 3119400 3222700 1627300 5065400 5287200 5030800 3649300 3537000 6865300 51211 2673 45968 429473;429474;429475;429476;429477;429478;429479;429480;429481;429482;429483;429484 339299;339300;339301;339302;339303 339299 3 TETQAEDTEPDPGESK Unmodified 1732.7275 0.72753271 3662 Q92793 CREBBP CREB-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.647 18.844 2 1.8851E-07 18695 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 86.313 86.313 125470000 0 0 0 8205200 11138000 10742000 8978700 9950600 11206000 11275000 11177000 12633000 9784300 6449600 13932000 51212 3662 45969 429485;429486;429487;429488;429489;429490;429491;429492;429493;429494;429495;429496 339304;339305;339306;339307;339308;339309;339310;339311;339312;339313;339314;339315 339313 12 TETVEEPMEEEEAAK Oxidation (M) 1736.7298 0.7298409 1002 P14625 HSP90B1 Endoplasmin yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.22 2 3 23 3 1 1 2 2 2 2 2 2 2 1 2 2 2 2 36.642 36.658 2;3 1.8222E-166 92429 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 240.85 232.33 700420000 131840000 26707000 955570 26139000 20178000 83267000 44001000 23403000 39436000 47813000 20802000 58076000 41865000 55814000 80119000 51213 1002 45970 429497;429498;429499;429500;429501;429502;429503;429504;429505;429506;429507;429508;429509;429510;429511;429512;429513;429514;429515;429516;429517;429518;429519;429520;429521;429522;429523;429524 339316;339317;339318;339319;339320;339321;339322;339323;339324;339325;339326;339327;339328;339329;339330;339331;339332;339333 339324 1366 17 TETVEEPMEEEEAAK Unmodified 1720.7349 0.73492628 1002 P14625 HSP90B1 Endoplasmin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.34 1 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 47.024 46.663 2 3.363E-216 46211 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 237.68 231.96 1169800000 121940000 31432000 0 26839000 27161000 141380000 38248000 31534000 41845000 75672000 101800000 71236000 70847000 78043000 311850000 51214 1002 45970 429525;429526;429527;429528;429529;429530;429531;429532;429533;429534;429535;429536;429537;429538;429539 339334;339335;339336;339337;339338;339339;339340;339341;339342;339343;339344;339345;339346;339347;339348;339349 339338 16 TETVEEPMEEEEAAKEEK Oxidation (M) 2122.91 0.90999011 1002 P14625 HSP90B1 Endoplasmin yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.05 3.38 4 1 15 2 3 1 2 1 1 2 1 1 1 2 1 2 33.693 32.476 3 5.0324E-55 41109 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 149.52 143.81 447790000 50667000 161430000 0 7432900 21355000 16349000 10854000 21749000 7765700 0 26602000 22839000 38721000 14202000 47822000 51215 1002 45971 429540;429541;429542;429543;429544;429545;429546;429547;429548;429549;429550;429551;429552;429553;429554;429555;429556;429557;429558;429559 339350;339351;339352;339353;339354;339355;339356;339357;339358;339359;339360;339361;339362;339363;339364;339365;339366;339367;339368;339369 339355 1366 18 TETVEEPMEEEEAAKEEK Unmodified 2106.9151 0.91507549 1002 P14625 HSP90B1 Endoplasmin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 42.299 40.998 2;3 2.7904E-112 45607 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 194.05 188.93 985810000 59915000 472490000 0 24913000 17591000 35225000 24642000 29075000 13145000 39894000 51524000 46848000 40803000 34131000 95619000 51216 1002 45971 429560;429561;429562;429563;429564;429565;429566;429567;429568;429569;429570;429571;429572;429573;429574;429575 339370;339371;339372;339373;339374;339375;339376;339377;339378;339379;339380;339381;339382;339383;339384;339385;339386 339384 17 TETVEEPMEEEEAAKEEKEESDDEAAVEEEEEEK Oxidation (M) 3970.6168 0.61684696 1002 P14625 HSP90B1 Endoplasmin yes yes 0 1 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 7.33 3.77 3 6 1 1 1 1 1 1 1 1 1 57.536 55.648 3;4 4.2521E-209 70086 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 176.84 176.52 249190000 30807000 142720000 25574000 0 6124500 0 2970500 12968000 0 6796200 10763000 0 0 0 10476000 51217 1002 45972 429576;429577;429578;429579;429580;429581;429582;429583;429584 339387;339388;339389;339390;339391;339392;339393;339394 339388 1366 7 TETVEEPMEEEEAAKEEKEESDDEAAVEEEEEEK Unmodified 3954.6219 0.62193233 1002 P14625 HSP90B1 Endoplasmin yes yes 0 0 2 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 2 1 1 65.073 59.3 4 1.7621E-198 76175 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 167.56 162.81 955430000 780230000 149750000 25439000 0 0 0 0 0 0 0 0 0 0 0 0 51218 1002 45972 429585;429586;429587;429588 339395;339396;339397;339398;339399;339400;339401 339396 6 TETVTSFR Unmodified 939.46616 0.46616048 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.5 31.686 2 0.0063963 34249 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 120.46 86.941 142230000 0 0 0 8052700 11926000 9945400 8304300 5639700 6669000 11113000 12999000 21008000 11441000 14961000 20168000 51219 1986 45973 429589;429590;429591;429592;429593;429594;429595;429596;429597;429598;429599;429600 339402;339403;339404;339405;339406;339407 339405 3 TETVTSFRK Unmodified 1067.5611 0.56112349 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 20.761 21.016 2 0.042043 21263 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 82.452 70.259 47695000 0 0 0 0 2142700 3519500 2537900 0 0 5385100 6530200 9080500 6092500 6431700 5974600 51220 1986 45974 429601;429602;429603;429604;429605;429606;429607;429608;429609 339408 339408 1 TEVADLRAAAVK Unmodified 1242.6932 0.6932003 4179 Q9BV73 CEP250 Centrosome-associated protein CEP250 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 48.329 43.535 3 0.02584 57053 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 35.737 23.523 13671000 0 6813100 6858200 0 0 0 0 0 0 0 0 0 0 0 0 51221 4179 45975 429610;429611 339409;339410 339409 1 TEVDIYNSDPLICR Unmodified 1693.7981 0.79813565 4045 Q99685 MGLL Monoglyceride lipase yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 76.967 77.077 2 9.6744E-20 88569 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 138.71 106.11 20760000 0 0 0 0 1761400 0 0 2414500 0 0 3577000 4241400 1636000 0 7129300 51222 4045 45976 429612;429613;429614;429615;429616;429617 339411;339412;339413;339414;339415 339411 5 TEVDIYNSDPLICRAGLK Unmodified 2063.0357 0.035740164 4045 Q99685 MGLL Monoglyceride lipase yes yes 0 0 1 By MS/MS 2 0 1 1 80.701 78.173 3 0.0096209 94895 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 36.029 25.37 2923600 0 0 2923600 0 0 0 0 0 0 0 0 0 0 0 0 51223 4045 45977 429618 339416 339416 1 TEVETQQVMR Oxidation (M) 1235.5816 0.58160094 4422 Q9H6S1 AZI2 5-azacytidine-induced protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 52.797 52.959 2 0.013644 59614 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 47.082 19.778 21969000 0 0 0 0 0 0 0 0 7471800 14498000 0 0 0 0 0 51224 4422 45978 429619;429620;429621 339417;339418 339418 5874 2 TEVHIRPK Unmodified 978.56106 0.56106391 1240 P28838 LAP3 Cytosol aminopeptidase yes yes 0 0 1 By MS/MS 2 0 1 1 16.38 12.17 2 0.026427 17931 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 138.9 114.26 48862000 48862000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51225 1240 45979 429622 339419 339419 0 TEVIPPLIENR Unmodified 1279.7136 0.71360139 774 P04114 APOB Apolipoprotein B-100;Apolipoprotein B-48 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.173 76.231 2 0.00039146 87910 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 86.898 71.69 104690000 0 0 0 5207500 7169000 6050700 7657700 11422000 6891800 10723000 10273000 13447000 7280100 8581600 9986600 51226 774 45980 429623;429624;429625;429626;429627;429628;429629;429630;429631;429632;429633;429634 339420;339421;339422;339423;339424;339425;339426;339427;339428;339429;339430;339431 339429 12 TEVIQLEDTLAQVRK Unmodified 1741.9574 0.95741349 2816;463 Q5VTR2;O75150 RNF20;RNF40 E3 ubiquitin-protein ligase BRE1A;E3 ubiquitin-protein ligase BRE1B no no 0 0 1 By MS/MS 10 0 1 1 78.563 78.809 3 0.004066 90689 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 29.723 26.062 9779300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9779300 51227 2816;463 45981 429635 339432 339432 1 TEVNGFDPLFNAITGLNGSGK Unmodified 2150.0644 0.064397756 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 95.976 96.112 2 0.00095806 111560 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.213 47.109 3732100 0 0 0 0 0 0 0 0 0 1467600 0 0 0 0 2264500 51228 643 45982 429636;429637 339433;339434 339434 2 TEVNSGFFYK Unmodified 1190.5608 0.56078914 1410 P40227;Q92526 CCT6A;CCT6B T-complex protein 1 subunit zeta;T-complex protein 1 subunit zeta-2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 4 2 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 60.943 59.474 2 5.2139E-05 68317 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 144.09 115.91 5659000000 122980000 3504500000 89560000 81098000 83457000 141490000 133720000 106980000 88647000 176770000 214530000 296870000 134600000 148000000 335840000 51229 1410 45983 429638;429639;429640;429641;429642;429643;429644;429645;429646;429647;429648;429649;429650;429651;429652;429653;429654;429655 339435;339436;339437;339438;339439;339440;339441;339442;339443;339444;339445;339446;339447;339448;339449;339450;339451;339452;339453;339454;339455 339455 19 TEVPGSVTEYK Unmodified 1208.5925 0.5924832 1338 P34949 MPI Mannose-6-phosphate isomerase yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 6.17 3.85 2 1 3 2 1 1 1 1 43.025 40.956 2 0.00072234 52387 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.342 65.655 136060000 0 118810000 5356000 0 0 0 0 0 0 0 4007400 5014500 0 2869300 0 51230 1338 45984 429656;429657;429658;429659;429660;429661 339456;339457;339458;339459;339460 339457 5 TEVQGEDGQVVLIK Unmodified 1513.7988 0.79878758 810 P05423 POLR3D DNA-directed RNA polymerase III subunit RPC4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 58.858 58.51 2 6.6594E-13 74020 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.47 85.097 83744000 0 18683000 0 3755600 4486000 4584200 5782900 5525800 5103500 4858800 6562700 6113400 4394100 4377200 9516800 51231 810 45985 429662;429663;429664;429665;429666;429667;429668;429669;429670;429671;429672;429673;429674;429675 339461;339462;339463;339464;339465;339466;339467;339468;339469;339470;339471;339472;339473 339463 12 TEVQVFK Unmodified 849.45962 0.45961853 3909 Q96KP1 EXOC2 Exocyst complex component 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 36.95 37.332 2 0.043924 41672 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 67.035 46.48 33180000 0 0 0 0 0 5470200 0 0 0 4756500 0 6607900 5441700 4191800 6711600 51232 3909 45986 429676;429677;429678;429679;429680;429681 339474 339474 1 TEVSGCPEDLTVGR Unmodified 1518.6984 0.69842161 3930 Q96MY1 NOL4L Nucleolar protein 4-like yes yes 0 0 0 By MS/MS 10 0 1 1 49.907 50.068 2 0.047318 56456 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 47.302 31.048 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51233 3930 45987 429682 339475 339475 1 TEVSLTLTNK Unmodified 1104.6027 0.60265396 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.09 3.31 5 3 24 2 5 1 2 2 3 1 2 2 2 2 2 2 2 2 53.514 52.28 2 1.1726E-05 66335 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.26 107.13 1572600000 48531000 1004600000 7889600 7440400 16988000 80286000 16784000 20242000 50408000 51234000 62196000 52992000 32069000 42454000 78478000 51234 1518 45988 429683;429684;429685;429686;429687;429688;429689;429690;429691;429692;429693;429694;429695;429696;429697;429698;429699;429700;429701;429702;429703;429704;429705;429706;429707;429708;429709;429710;429711;429712;429713;429714 339476;339477;339478;339479;339480;339481;339482;339483;339484;339485;339486;339487;339488;339489;339490;339491;339492;339493;339494;339495;339496;339497;339498;339499;339500;339501;339502;339503;339504;339505;339506;339507;339508;339509;339510;339511;339512;339513;339514;339515;339516;339517;339518;339519 339485 42 TEVSPVPR Unmodified 883.47633 0.47633123 300 O43159 RRP8 Ribosomal RNA-processing protein 8 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 24.801 25.06 2 0.03661 26916 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 51.787 18.049 30729000 0 0 0 0 2664200 3948200 2740000 0 0 3215000 2534000 5537100 4286700 1825500 3978200 51235 300 45989 429715;429716;429717;429718;429719;429720;429721;429722;429723 339520;339521;339522 339521 3 TEVSQWEK Unmodified 1005.4767 0.47672516 4138 Q9BTA9 WAC WW domain-containing adapter protein with coiled-coil yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 29.35 29.435 2 0.036158 32176 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 87.181 42.46 25556000 0 0 0 0 0 10359000 0 15197000 0 0 0 0 0 0 0 51236 4138 45990 429724;429725;429726 339523;339524;339525 339523 1 TEVTGDHIPTPQDLPQR Unmodified 1902.9436 0.94355434 1780 P56211 ARPP19 cAMP-regulated phosphoprotein 19 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 60.647 61.007 3 0.0002907 68818 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.454 39.85 29472000 0 0 0 0 0 0 0 0 0 1944300 4496300 7440200 0 6164000 9427300 51237 1780 45991 429727;429728;429729;429730;429731 339526;339527 339526 2 TEVTGDHIPTPQDLPQRK Unmodified 2031.0385 0.038517356 1780 P56211 ARPP19 cAMP-regulated phosphoprotein 19 yes yes 0 0 1 By MS/MS 2 0 2 2 57.6 53.774 3;4 0.022667 66676 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 32.926 23.395 59649000 0 0 59649000 0 0 0 0 0 0 0 0 0 0 0 0 51238 1780 45992 429732;429733 339528;339529 339528 1 TEVVSLLLDRK Unmodified 1271.7449 0.74490152 472 O75179 ANKRD17 Ankyrin repeat domain-containing protein 17 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.007 76.119 3 0.00147 87799 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 50.354 33.328 55793000 0 0 0 0 1318100 3135100 2295100 3952400 5122900 4511800 4654300 5451600 2973000 4597500 17781000 51239 472 45993 429734;429735;429736;429737;429738;429739;429740;429741;429742;429743;429744 339530;339531;339532;339533;339534;339535;339536;339537;339538;339539 339539 10 TEVWERSLK Unmodified 1146.6033 0.60332266 928 P10746 UROS Uroporphyrinogen-III synthase yes yes 0 0 1 By MS/MS 2 0 1 1 51.023 43.061 3 0.031006 59497 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.001 29.164 16902000 16902000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51240 928 45994 429745 339540;339541 339540 2 TEWETAAPAVAETPDIK Acetyl (Protein N-term) 1869.8996 0.89962384 1512 P46782 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.67 3.88 3 1 11 3 1 1 1 1 1 1 1 1 1 1 1 1 87.749 88.035 2;3 9.3097E-38 96386 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 185.37 176.64 1808700000 122570000 55235000 0 52338000 0 104310000 91313000 101510000 106850000 156210000 181670000 217070000 177640000 206560000 235430000 51241 1512 45995 429746;429747;429748;429749;429750;429751;429752;429753;429754;429755;429756;429757;429758;429759;429760 339542;339543;339544;339545;339546;339547;339548;339549;339550;339551;339552;339553;339554;339555;339556;339557 339547 16 TEWLDGK Unmodified 847.40758 0.40758296 1931 P62937;P0DN26;A0A0B4J2A2;A0A075B767;A0A075B759;Q9Y536;F5H284;P0DN37 PPIA;PPIAL4C;PPIAL4E;PPIAL4A;PPIAL4D Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase A-like 4A/B/C;Peptidyl-prolyl cis-trans isomerase A-like 4D yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 4 2 12 1 4 1 1 1 1 1 1 1 1 1 1 1 1 1 38.301 36.773 2 0.022033 45905 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 108.24 94.73 16868000000 1374900000 13452000000 412870000 27114000 22027000 24335000 23173000 1091000 18549000 28911000 272700000 291710000 34684000 173970000 710300000 51242 1931 45996 429761;429762;429763;429764;429765;429766;429767;429768;429769;429770;429771;429772;429773;429774;429775;429776;429777;429778 339558;339559;339560;339561;339562;339563;339564;339565;339566;339567;339568;339569;339570;339571;339572;339573;339574;339575;339576;339577;339578 339575 21 TEWSREEEEK Unmodified 1321.5786 0.57862405 4010 Q99459 CDC5L Cell division cycle 5-like protein yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 16.557 16.114 3 0.0011719 14755 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.379 59.57 71035000 5498800 0 12781000 3389000 2097600 4518700 2758800 3684700 2881700 4879000 0 7472800 6641500 6081800 8349500 51243 4010 45997 429779;429780;429781;429782;429783;429784;429785;429786;429787;429788;429789;429790;429791 339579;339580;339581;339582;339583 339580 5 TEYDAVAEK Unmodified 1024.4713 0.47130543 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 0 0 By MS/MS 10 0 1 1 22.316 22.302 2 0.041756 23364 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 76.679 52.707 25110000 0 0 0 0 0 25110000 0 0 0 0 0 0 0 0 0 51244 4634 45998 429792 339584 339584 0 TEYEEAQDAIVK Unmodified 1394.6565 0.65654002 1474 P43246 MSH2 DNA mismatch repair protein Msh2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 47.133 46.217 2 0.0039424 52190 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 59.013 47.862 605440000 15791000 165630000 0 26028000 32284000 58975000 37967000 26603000 34303000 38668000 56295000 31603000 34240000 0 47059000 51245 1474 45999 429793;429794;429795;429796;429797;429798;429799;429800;429801;429802;429803;429804;429805 339585;339586;339587;339588;339589;339590;339591;339592;339593 339591 4 TEYFAQHEQGAAAGAADISTLDQK Unmodified 2521.1721 0.1721103 4068 Q99871 HAUS7 HAUS augmin-like complex subunit 7 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 65.361 65.574 3 2.7661E-06 74586 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.735 42.683 24212000 0 0 0 0 0 2827800 3013700 0 2611400 4175400 4591300 0 0 0 6992300 51246 4068 46000 429806;429807;429808;429809;429810;429811 339594;339595;339596 339596 3 TEYISTEFNR Unmodified 1258.583 0.58298115 3366 Q8N7H5 PAF1 RNA polymerase II-associated factor 1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.815 52.958 2 5.0268E-05 58635 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 144.12 111.8 794070000 0 0 0 21321000 24022000 43924000 33075000 25052000 30444000 65646000 137190000 93065000 120520000 73425000 126390000 51247 3366 46001 429812;429813;429814;429815;429816;429817;429818;429819;429820;429821;429822;429823 339597;339598;339599;339600;339601;339602;339603;339604;339605;339606;339607 339600 11 TEYISTEFNRYGISNEKPEVK Unmodified 2503.2231 0.22308324 3366 Q8N7H5 PAF1 RNA polymerase II-associated factor 1 homolog yes yes 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 74.079 68.472 4 0.00050777 89389 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.957 48.234 29399000 22364000 0 7035100 0 0 0 0 0 0 0 0 0 0 0 0 51248 3366 46002 429824;429825 339608;339609 339608 2 TEYLSNADER Unmodified 1196.5309 0.53094558 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 1 2 2 2 2 2 1 2 2 1 26.985 27.147 2 0.0017532 29426 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 95.311 79.162 285460000 0 0 0 28829000 16408000 24208000 19081000 23308000 13167000 24325000 28577000 31153000 26119000 20339000 29945000 51249 2392 46003 429826;429827;429828;429829;429830;429831;429832;429833;429834;429835;429836;429837;429838;429839;429840;429841;429842;429843;429844;429845;429846 339610;339611;339612;339613;339614;339615;339616;339617;339618;339619;339620;339621 339618 8 TEYLSNADERLR Unmodified 1465.7161 0.71612058 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 42.321 42.375 3 0.00076243 46357 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.367 32.526 93969000 0 0 0 7344800 8619000 0 12991000 15121000 0 11181000 0 0 0 15305000 23407000 51250 2392 46004 429847;429848;429849;429850;429851;429852;429853 339622;339623;339624;339625 339623 3 TFALPGIIK Unmodified 958.58515 0.5851534 2174 Q0JRZ9 FCHO2 F-BAR domain only protein 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 82.895 83.025 2 0.019171 96162 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 54.205 42.484 30182000 0 0 0 0 0 3871500 0 1617700 1879900 3188700 0 3618200 3404200 5502900 7099300 51251 2174 46005 429854;429855;429856;429857;429858;429859;429860;429861 339626;339627;339628 339626 3 TFAPEEISAMVLTK Oxidation (M) 1551.7854 0.7854457 932 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 12 4 44 2 9 5 4 4 4 4 3 4 3 3 4 3 4 4 82.034 81.107 2;3 3.8157E-18 100074 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.02 107.33 6306700000 119800000 3582100000 381670000 81186000 155630000 185660000 142030000 121940000 140610000 228940000 219120000 310590000 106360000 174220000 356800000 51252 932 46006 429862;429863;429864;429865;429866;429867;429868;429869;429870;429871;429872;429873;429874;429875;429876;429877;429878;429879;429880;429881;429882;429883;429884;429885;429886;429887;429888;429889;429890;429891;429892;429893;429894;429895;429896;429897;429898;429899;429900;429901;429902;429903;429904;429905;429906;429907;429908;429909;429910;429911;429912;429913;429914;429915;429916;429917;429918;429919;429920;429921 339629;339630;339631;339632;339633;339634;339635;339636;339637;339638;339639;339640;339641;339642;339643;339644;339645;339646;339647;339648;339649;339650;339651;339652;339653;339654;339655;339656;339657;339658;339659;339660;339661;339662;339663;339664;339665;339666;339667;339668;339669;339670 339636 1208 29 TFAPEEISAMVLTK Unmodified 1535.7905 0.79053108 932 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.28 3.77 1 8 2 21 3 6 2 1 2 2 1 2 1 2 2 2 2 2 2 90.574 89.433 2;3 6.0903E-19 107846 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 125.97 100.58 4733200000 253810000 3805100000 157370000 3058900 21761000 32635000 11794000 37130000 16103000 60260000 51739000 43471000 12565000 41634000 184820000 51253 932 46006 429922;429923;429924;429925;429926;429927;429928;429929;429930;429931;429932;429933;429934;429935;429936;429937;429938;429939;429940;429941;429942;429943;429944;429945;429946;429947;429948;429949;429950;429951;429952;429953 339671;339672;339673;339674;339675;339676;339677;339678;339679;339680;339681;339682;339683;339684;339685;339686;339687;339688;339689;339690;339691;339692;339693;339694;339695;339696;339697;339698;339699;339700;339701;339702;339703;339704;339705;339706;339707;339708 339696 36 TFATALDTTRHELPVR Unmodified 1826.9639 0.96389585 4135 Q9BT25 HAUS8 HAUS augmin-like complex subunit 8 yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 67.241 67.654 4 0.041856 76744 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 27.496 23.772 10375000 0 0 0 0 0 0 0 0 0 0 2913100 0 0 0 7462100 51254 4135 46007 429954;429955 339709 339709 1 TFAVDETSVSGYIYHK Unmodified 1815.8679 0.86792978 3683 Q92900 UPF1 Regulator of nonsense transcripts 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 75.705 75.049 3 0.00039002 86561 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.918 56.45 107600000 52900000 0 0 1131900 0 4925900 0 3284000 3387700 4972400 3055100 5483400 1986300 3792000 22682000 51255 3683 46008 429956;429957;429958;429959;429960;429961;429962;429963;429964;429965;429966 339710;339711;339712 339711 3 TFCPAHK Unmodified 859.40106 0.4010578 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 11.792 8.6343 2 0.038141 11655 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.263 65.336 4081600000 2425700000 960310000 695600000 0 0 0 0 0 0 0 0 0 0 0 0 51256 1565 46009 429967;429968;429969 339713;339714 339713 2 TFDAPPALPK Unmodified 1055.5651 0.56514624 709 O95997 PTTG1 Securin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 60.931 60.572 2 0.0082578 68647 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 60.478 23.717 145280000 0 47679000 0 3784000 4374400 4748700 7071100 5299300 6032000 8795300 12642000 11839000 9717400 7515900 15786000 51257 709 46010 429970;429971;429972;429973;429974;429975;429976;429977;429978;429979;429980;429981;429982 339715;339716;339717;339718;339719;339720;339721;339722 339719 7 TFDAQIVIIEHK Unmodified 1412.7664 0.76636524 1014 P15170 GSPT1 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A yes yes 0 0 0 By MS/MS 2 0 1 1 80.551 72.42 3 0.0095428 94921 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.732 37.377 17789000 17789000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51258 1014 46011 429983 339723 339723 1 TFDESDFDDEAYYAALGTRPPINMEELDESYQK Unmodified 3858.6731 0.67306089 3905 Q96KB5 PBK Lymphokine-activated killer T-cell-originated protein kinase yes yes 0 0 1 By MS/MS 2 0 1 1 96.038 87.908 3 3.6595E-186 113594 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 166.2 166.14 13169000 13169000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51259 3905 46012 429984 339724;339725 339724 2 TFDHMARQDDEK Unmodified 1491.6412 0.64124108 3225 Q8IVD9 NUDCD3 NudC domain-containing protein 3 yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 15.886 15.136 3 0.0044137 23022 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.179 42.948 40244000 9823100 0 5483300 0 0 2301000 975310 0 1375800 0 0 4375600 5233600 0 10676000 51260 3225 46013 429985;429986;429987;429988;429989;429990;429991;429992 339726;339727 339727 2 TFDHYCEYR Unmodified 1289.5135 0.51352137 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 32.782 32.896 3 0.016828 36086 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 44.309 40.546 32981000 0 0 0 0 2459400 3848900 0 3445100 3524100 6246600 9292700 0 0 4163700 0 51261 2392 46014 429993;429994;429995;429996;429997;429998;429999 339728 339728 1 TFDQLTPDESK Unmodified 1279.5932 0.59321148 2515 Q15293 RCN1 Reticulocalbin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.38 3.93 1 3 2 7 3 2 1 1 1 1 1 1 1 1 50.177 48.631 2 5.0776E-19 57829 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 207.34 180.04 3539300000 125290000 2645300000 8706300 46215000 0 0 0 0 0 63988000 107940000 58520000 76653000 130110000 276500000 51262 2515 46015 430000;430001;430002;430003;430004;430005;430006;430007;430008;430009;430010;430011;430012 339729;339730;339731;339732;339733;339734;339735;339736;339737;339738;339739;339740;339741 339735 13 TFDQLTPEESK Unmodified 1293.6089 0.60886155 376 O43852 CALU Calumenin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 45.857 44.591 2 1.0959E-09 56413 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 170.47 146.52 1910900000 65633000 1430600000 5335000 11153000 13563000 10934000 18017000 21978000 12999000 23196000 55802000 67219000 21717000 39406000 113370000 51263 376 46016 430013;430014;430015;430016;430017;430018;430019;430020;430021;430022;430023;430024;430025;430026;430027;430028 339742;339743;339744;339745;339746;339747;339748;339749;339750;339751;339752;339753;339754;339755;339756;339757;339758;339759;339760;339761;339762;339763 339748 22 TFDSIVMDPK Oxidation (M) 1167.5482 0.54817555 982 P13667 PDIA4 Protein disulfide-isomerase A4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 53.703 52.253 2 0.0012222 58214 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.136 71.992 445960000 18008000 284850000 10088000 10448000 7560300 8365600 7358300 7725100 7063500 11789000 21725000 0 13419000 12362000 25192000 51264 982 46017 430029;430030;430031;430032;430033;430034;430035;430036;430037;430038;430039;430040;430041;430042;430043 339764;339765;339766;339767;339768;339769;339770;339771;339772;339773;339774;339775;339776;339777 339768 1325 14 TFDSIVMDPK Unmodified 1151.5533 0.55326092 982 P13667 PDIA4 Protein disulfide-isomerase A4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 3 9 1 1 1 1 1 1 1 1 1 1 1 1 66.933 65.319 2 0.00012367 86243 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 145.17 104.14 679100000 14083000 609030000 6458200 3794600 3914900 5829600 0 0 4547800 5062000 12546000 8556700 5284900 0 0 51265 982 46017 430044;430045;430046;430047;430048;430049;430050;430051;430052;430053;430054;430055 339778;339779;339780;339781;339782;339783;339784 339783 5 TFDSIVMDPKK Unmodified 1279.6482 0.64822394 982 P13667 PDIA4 Protein disulfide-isomerase A4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.09 3.73 5 2 4 1 4 2 1 1 1 1 57.695 54.497 2;3 0.0015558 71556 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.179 52.005 595900000 38231000 341750000 93943000 0 0 0 0 0 0 0 15230000 28997000 12437000 0 65314000 51266 982 46018 430056;430057;430058;430059;430060;430061;430062;430063;430064;430065;430066 339785;339786;339787;339788;339789;339790;339791 339785 3 TFDSIVMDPKK Oxidation (M) 1295.6431 0.64313856 982 P13667 PDIA4 Protein disulfide-isomerase A4 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS 3.25 2.59 5 2 1 2 3 2 1 48.06 42.892 2;3 0.0046602 53376 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 91.584 80.433 221080000 9717700 89371000 121990000 0 0 0 0 0 0 0 0 0 0 0 0 51267 982 46018 430067;430068;430069;430070;430071;430072;430073;430074 339792;339793;339794;339795;339796;339797;339798 339792 1325 7 TFDSVDNR Unmodified 952.42502 0.42502394 3968 Q96RK0 CIC Protein capicua homolog yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 19.81 20.031 2 0.032623 20708 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 54.205 40.997 15410000 0 0 0 0 2480400 0 0 0 1735700 2713300 0 3352300 2654600 2474000 0 51268 3968 46019 430075;430076;430077;430078;430079;430080 339799 339799 1 TFDTFCPLGPALVTK Unmodified 1665.8436 0.84362928 3855 Q96GK7;Q6P2I3 FAHD2A;FAHD2B Fumarylacetoacetate hydrolase domain-containing protein 2A;Fumarylacetoacetate hydrolase domain-containing protein 2B yes no 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 91.081 86.403 2 1.1838E-37 108411 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 160.15 136.77 171400000 7310400 160670000 3428200 0 0 0 0 0 0 0 0 0 0 0 0 51269 3855 46020 430081;430082;430083;430084 339800;339801;339802;339803 339800 4 TFEDAQK Unmodified 837.38685 0.38684752 3366 Q8N7H5 PAF1 RNA polymerase II-associated factor 1 homolog yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 10.95 7.3806 2 0.029678 10352 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.401 40.692 109690000 9052900 100640000 0 0 0 0 0 0 0 0 0 0 0 0 0 51270 3366 46021 430085;430086 339804;339805 339804 2 TFEDFVR Unmodified 912.43413 0.43413207 2231 Q13085 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 2 1 1 57.886 58.009 2 0.032282 66116 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 73.039 55.272 100280000 0 0 0 3994600 5914400 9556100 5988700 6861500 6220500 10385000 9150500 2313900 14595000 11007000 14294000 51271 2231 46022 430087;430088;430089;430090;430091;430092;430093;430094;430095;430096;430097;430098;430099 339806;339807;339808 339808 3 TFEDISEK Unmodified 967.44984 0.44984171 1547 P48637 GSS Glutathione synthetase yes yes 0 0 0 By MS/MS 10 0 1 1 31.139 31.848 2 0.04296 33696 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.423 27.652 23175000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23175000 51272 1547 46023 430100 339809 339809 1 TFEEAAAQLLESSVQNLFK Unmodified 2124.0739 0.07389981 4973 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 yes yes 0 0 0 By MS/MS 3 0 1 1 103.5 99.881 3 0.0021424 120123 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 40.349 34.896 1468200 0 1468200 0 0 0 0 0 0 0 0 0 0 0 0 0 51273 4973 46024 430101 339810 339810 1 TFEEALAR Unmodified 935.47125 0.47124585 3559 Q8WVB6 CHTF18 Chromosome transmission fidelity protein 18 homolog yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 42.554 42.787 2 0.0062194 48065 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 102.72 75.194 154750000 0 0 0 13833000 0 17656000 0 16287000 11719000 19574000 0 23105000 14971000 15467000 22134000 51274 3559 46025 430102;430103;430104;430105;430106;430107;430108;430109;430110 339811;339812;339813;339814;339815;339816;339817;339818 339812 8 TFEEALARGDAASSPAPAASVGSSQGGAR Unmodified 2717.3005 0.30049872 3559 Q8WVB6 CHTF18 Chromosome transmission fidelity protein 18 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.939 61.042 3 1.5771E-26 69681 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 76.899 69.366 90225000 0 0 0 3344300 4821500 5706900 6655200 5776400 6022400 10170000 9910700 12210000 7107100 7835500 10664000 51275 3559 46026 430111;430112;430113;430114;430115;430116;430117;430118;430119;430120;430121;430122 339819;339820;339821;339822;339823;339824;339825;339826;339827;339828;339829;339830;339831;339832 339820 14 TFEEALARGDAASSPAPAASVGSSQGGARK Unmodified 2845.3955 0.39546173 3559 Q8WVB6 CHTF18 Chromosome transmission fidelity protein 18 homolog yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 54.753 55.069 4 2.9229E-24 62254 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 61.89 58.903 91201000 0 0 0 0 0 0 13150000 0 11809000 12666000 11021000 13493000 7650800 8763500 12647000 51276 3559 46027 430123;430124;430125;430126;430127;430128;430129;430130 339833;339834;339835;339836;339837;339838;339839;339840;339841;339842 339835 10 TFEECQQNLMK Unmodified 1426.6221 0.62208554 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 0 By MS/MS 2 0 1 1 50.414 44.708 2 3.7432E-07 58058 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 149.65 130.34 17752000 0 17752000 0 0 0 0 0 0 0 0 0 0 0 0 0 51277 1601 46028 430131 339843 339843 1 TFEEDPAVGAIVLTGGDK Unmodified 1817.9047 0.90470922 1267 P30084 ECHS1 Enoyl-CoA hydratase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.25 3.7 3 2 3 1 3 1 1 1 1 85.232 80.869 2;3 2.6977E-11 102298 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 132.86 109.62 292520000 11774000 276410000 4335000 0 0 0 0 0 0 0 0 0 0 0 0 51278 1267 46029 430132;430133;430134;430135;430136;430137;430138;430139 339844;339845;339846;339847;339848;339849;339850 339846 6 TFEEFQELHNK Unmodified 1420.6623 0.6622941 178 O00750 PIK3C2B Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit beta yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 51.36 51.475 3 0.0090105 58129 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 45.829 24.259 16011000 0 0 0 0 0 6824600 0 0 0 9186500 0 0 0 0 0 51279 178 46030 430140;430141 339851 339851 1 TFEEPPFEK Unmodified 1122.5233 0.523341 3591 Q8WXH0 SYNE2 Nesprin-2 yes yes 0 0 0 By MS/MS 2 0 1 1 61.187 55.312 2 0.051935 71128 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.485 60.716 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51280 3591 46031 430142 339852 339852 1 TFEESFQK Unmodified 1014.4658 0.46582612 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.17 37.35 2 0.0064947 41252 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 100.39 90.253 131690000 0 0 0 4442700 5833300 7340800 7851100 6945300 5759600 15006000 14106000 13451000 12093000 12336000 26522000 51281 1300 46032 430143;430144;430145;430146;430147;430148;430149;430150;430151;430152;430153;430154 339853;339854;339855;339856;339857;339858;339859;339860;339861;339862 339857 10 TFEGHDASVLK Unmodified 1202.5932 0.5931519 2188 Q12788 TBL3 Transducin beta-like protein 3 yes yes 0 0 0 By MS/MS 2 0 2 2 37.594 34.162 2;3 0.00064139 43268 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 97.565 56.536 33582000 0 0 33582000 0 0 0 0 0 0 0 0 0 0 0 0 51282 2188 46033 430155;430156 339863;339864 339863 1 TFEGIDPK Unmodified 905.44945 0.44944778 1620 P50395 GDI2 Rab GDP dissociation inhibitor beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.918 40.098 2 0.017183 44858 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.073 37.966 308810000 0 0 0 21587000 6229200 10406000 9328500 9234200 8965600 13114000 43681000 36846000 10547000 28542000 110330000 51283 1620 46034 430157;430158;430159;430160;430161;430162;430163;430164;430165;430166;430167;430168 339865;339866;339867;339868;339869;339870;339871;339872;339873;339874;339875;339876 339866 11 TFEGNLTTK Unmodified 1009.508 0.50802529 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32.759 31.929 2 0.019124 40841 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.827 44.685 521330000 9616500 306970000 4670200 8859000 12911000 17315000 16266000 15891000 13289000 15396000 21902000 21346000 18069000 17553000 21267000 51284 2930 46035 430169;430170;430171;430172;430173;430174;430175;430176;430177;430178;430179;430180;430181;430182;430183 339877;339878;339879;339880;339881;339882 339881 6 TFEGVDPQTTSMRDVYRK Unmodified 2129.0212 0.021152733 1294 P31150 GDI1 Rab GDP dissociation inhibitor alpha yes yes 0 0 2 By MS/MS 2 0 1 1 64.811 56.523 4 0.00047124 75978 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.463 40.644 50000000 50000000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51285 1294 46036 430184 339883 339883 1 TFEHVTSEIGAEEAEEVGVEHLLR Unmodified 2680.298 0.2980391 1668 P51665 PSMD7 26S proteasome non-ATPase regulatory subunit 7 yes yes 0 0 0 By MS/MS 2 0 1 1 90.012 81.881 4 0.0018712 106462 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 35.918 32.921 9776500 9776500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51286 1668 46037 430185 339884 339884 0 TFEHVTSEIGAEEAEEVGVEHLLRDIK Unmodified 3036.504 0.50400913 1668 P51665 PSMD7 26S proteasome non-ATPase regulatory subunit 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.38 0.484 5 3 4 2 2 93.488 88.95 4;5 2.1681E-40 112908 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.33 101.74 606700000 581410000 20350000 4941900 0 0 0 0 0 0 0 0 0 0 0 0 51287 1668 46038 430186;430187;430188;430189;430190;430191;430192;430193 339885;339886;339887;339888;339889;339890;339891 339889 5 TFEINPR Unmodified 875.45012 0.45011648 1002 P14625;Q58FF3 HSP90B1;HSP90B2P Endoplasmin;Putative endoplasmin-like protein yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 42.75 42.719 2 0.02342 48483 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 86.086 33.403 510120000 0 0 0 71499000 72369000 0 0 0 0 119070000 0 0 0 0 247180000 51288 1002 46039 430194;430195;430196;430197;430198 339892;339893;339894;339895;339896;339897 339896 5 TFEISASDK Unmodified 996.47639 0.47639081 4890 Q9UH65 SWAP70 Switch-associated protein 70 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 39.971 39.028 2 0.015996 43736 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 56.916 43.14 320640000 11503000 232890000 0 5435800 3417800 8239200 0 0 4321500 8787200 10308000 11538000 5840800 0 18359000 51289 4890 46040 430199;430200;430201;430202;430203;430204;430205;430206;430207;430208;430209 339898;339899;339900;339901;339902;339903;339904 339901 7 TFEISASDKK Unmodified 1124.5714 0.57135383 4890 Q9UH65 SWAP70 Switch-associated protein 70 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 33.833 29.254 2 0.026136 36382 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 80.438 62.619 20000000 0 20000000 0 0 0 0 0 0 0 0 0 0 0 0 0 51290 4890 46041 430210;430211 339905 339905 1 TFEISEPVITPSQR Unmodified 1602.8253 0.82533668 4735 Q9NXX6 NSMCE4A Non-structural maintenance of chromosomes element 4 homolog A yes yes 0 0 0 By matching By matching By matching By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 76.321 76.283 2 0.0040662 88194 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 46.592 22.606 19659000 0 0 0 1464800 2278200 0 0 0 0 4358600 5452100 3360800 2744800 0 0 51291 4735 46042 430212;430213;430214;430215;430216;430217 339906 339906 1 TFEISEPVITPSQRQQK Unmodified 1987.0375 0.037454724 4735 Q9NXX6 NSMCE4A Non-structural maintenance of chromosomes element 4 homolog A yes yes 0 0 1 By MS/MS 2 0 1 1 75.8 67.669 3 0.01781 89309 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 33.893 25.996 12265000 12265000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51292 4735 46043 430218 339907 339907 1 TFEMSDFIVDTR Oxidation (M) 1475.6602 0.66024519 487 O75369 FLNB Filamin-B yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 71.936 72.112 2 0.0020664 82768 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 61.213 44.272 32814000 0 0 0 0 0 4645500 3252300 0 2285700 5286000 0 6041600 2997800 0 8305500 51293 487 46044 430219;430220;430221;430222;430223;430224;430225 339908;339909;339910 339908 625 3 TFEMSDFIVDTR Unmodified 1459.6653 0.66533057 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS 10 0 3 2 1 85.372 85.523 2 2.077E-06 98766 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 113.93 103.1 10249000 0 0 0 0 0 0 0 0 0 0 0 3000500 0 0 7249000 51294 487 46044 430226;430227;430228 339911;339912 339911 2 TFESLVDFSK Unmodified 1171.5761 0.57610486 2636 Q16836 HADH Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 81.147 78.619 2 0.0027078 95424 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 101.65 75.707 7787800 0 0 7787800 0 0 0 0 0 0 0 0 0 0 0 0 51295 2636 46045 430229 339913 339913 1 TFESSQIESVK Unmodified 1253.6139 0.61394692 2770 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 43.853 43.937 2 0.00133 49085 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 96.143 80.883 22966000 0 0 0 8108200 0 7396400 0 0 0 0 0 0 0 0 7460900 51296 2770 46046 430230;430231;430232;430233;430234;430235 339914;339915;339916;339917;339918;339919 339916 6 TFEVCDLPVR Unmodified 1234.6016 0.6016081 1358 P35606 COPB2 Coatomer subunit beta' yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.762 74.826 2 0.00090451 86302 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 133.23 119.54 170230000 0 0 0 11220000 5786700 10003000 5840000 5052700 11612000 14406000 18480000 24530000 16874000 16995000 29426000 51297 1358 46047 430236;430237;430238;430239;430240;430241;430242;430243;430244;430245;430246;430247 339920;339921;339922;339923;339924;339925;339926;339927;339928;339929;339930;339931;339932;339933 339922 14 TFEVCDLPVRAAK Unmodified 1504.7708 0.77079869 1358 P35606 COPB2 Coatomer subunit beta' yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 74.105 69.213 3 1.3723E-10 87894 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.531 90.71 429980000 253660000 136270000 40051000 0 0 0 0 0 0 0 0 0 0 0 0 51298 1358 46048 430248;430249;430250;430251;430252 339934;339935;339936;339937 339934 3 TFEVPEENTAETITR Unmodified 1735.8265 0.8264589 712 O96006 ZBED1 Zinc finger BED domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 67.857 68.003 2 1.1758E-26 78410 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 138.75 133.03 99362000 0 0 0 0 8053700 12511000 7763400 9857100 0 9455800 8977800 8102000 9575500 8835700 16230000 51299 712 46049 430253;430254;430255;430256;430257;430258;430259;430260;430261;430262;430263 339938;339939;339940;339941;339942;339943;339944;339945;339946;339947;339948 339946 11 TFFEELAVEDK Unmodified 1326.6343 0.63434802 3421 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 80.599 79.882 2 4.3531E-05 92391 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 116.3 93.591 474560000 0 314340000 36366000 3904600 5419600 12406000 8814800 7638000 12666000 18342000 14894000 18623000 9022200 12125000 0 51300 3421 46050 430264;430265;430266;430267;430268;430269;430270;430271;430272;430273;430274;430275;430276;430277;430278 339949;339950;339951;339952;339953;339954;339955;339956;339957;339958;339959;339960;339961;339962;339963 339961 15 TFFGDDFIPNDILIGCEEEEQENGK Unmodified 2915.2807 0.28073406 1694 P52701 MSH6 DNA mismatch repair protein Msh6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 2 1 1 1 1 97.654 93.015 3 5.6596E-108 116271 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 152.47 148.9 46239000 36702000 4587200 4949300 0 0 0 0 0 0 0 0 0 0 0 0 51301 1694 46051 430279;430280;430281 339964;339965;339966 339965 3 TFFPEEISSMVLTK Oxidation (M) 1643.8117 0.81166045 1743 P54652 HSPA2 Heat shock-related 70 kDa protein 2 yes yes 0 1 0 By MS/MS 10 0 1 1 85.844 86.013 2 0.016317 99407 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.44 35.863 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51302 1743 46052 430282 339967 339967 2833 1 TFFSFPAVVAPFK Unmodified 1456.7755 0.77547336 1440 P41250 GARS Glycine--tRNA ligase yes yes 0 0 0 By MS/MS 10 0 1 1 96.638 96.793 2 0.0014399 112327 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.283 52.119 4050400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4050400 51303 1440 46053 430283 339968 339968 1 TFGAPRPYSSSGPSPFALAVVK Unmodified 2235.1688 0.16880325 2708 Q53SF7 COBLL1 Cordon-bleu protein-like 1 yes yes 0 0 1 By MS/MS 10 0 1 1 82.778 82.98 3 0.029927 95724 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 34.65 26.362 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51304 2708 46054 430284 339969 339969 1 TFGESQDLPLK Unmodified 1233.6241 0.62411768 222 O14867 BACH1 Transcription regulator protein BACH1 yes yes 0 0 0 By MS/MS 2 0 1 1 66.804 60.888 2 0.004994 77921 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.556 63.62 39940000 0 39940000 0 0 0 0 0 0 0 0 0 0 0 0 0 51305 222 46055 430285 339970 339970 1 TFGETHPFTK Unmodified 1163.5611 0.56112349 896 P09960 LTA4H Leukotriene A-4 hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.62 3.87 7 2 7 3 3 3 1 1 1 1 1 1 1 38.351 35.691 2;3 1.0461E-10 45521 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 169.09 153.65 5110900000 3462200000 750710000 761140000 7158900 0 5363600 0 3545800 0 0 23054000 15665000 0 14400000 67693000 51306 896 46056 430286;430287;430288;430289;430290;430291;430292;430293;430294;430295;430296;430297;430298;430299;430300;430301 339971;339972;339973;339974;339975;339976;339977;339978;339979;339980;339981 339980 8 TFGGFASSSFGEQK Unmodified 1448.6572 0.65720872 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 66.212 66.008 2 0.00055488 75462 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 84.479 71.388 67149000 0 0 1573800 1955400 2054000 6598700 3317600 3885800 5880400 6512900 4046200 7472300 5603300 5647200 12602000 51307 1364 46057 430302;430303;430304;430305;430306;430307;430308;430309;430310;430311;430312;430313;430314 339982;339983;339984;339985;339986;339987;339988;339989;339990;339991;339992;339993;339994 339992 11 TFGSSLPVK Unmodified 934.51238 0.51238239 3548 Q8WUM0 NUP133 Nuclear pore complex protein Nup133 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 57.169 51.188 2 0.016553 66310 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.906 36.66 299730000 128920000 151920000 18889000 0 0 0 0 0 0 0 0 0 0 0 0 51308 3548 46058 430315;430316;430317 339995;339996 339995 2 TFGTAIVINPEK Unmodified 1288.7027 0.70270235 2331 Q13619 CUL4A Cullin-4A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 73.039 71.669 2 0.00013853 86396 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 98.04 84.449 2051900000 216450000 1595600000 37760000 6492000 9995900 20318000 13262000 12986000 9381700 22783000 24978000 20933000 14684000 16216000 30009000 51309 2331 46059 430318;430319;430320;430321;430322;430323;430324;430325;430326;430327;430328;430329;430330;430331;430332;430333;430334 339997;339998;339999;340000;340001;340002;340003;340004;340005;340006;340007;340008;340009;340010;340011;340012;340013 340004 16 TFGTFSVEEYVLPK Unmodified 1615.8134 0.81337501 36 A8K2U0 A2ML1 Alpha-2-macroglobulin-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 88.724 88.767 2 0.019484 103045 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 50.108 40.154 8998800 0 0 0 1676800 0 0 0 2805400 0 2816300 1700300 0 0 0 0 51310 36 46060 430335;430336;430337;430338 340014 340014 1 TFGVSPLR Unmodified 875.4865 0.48650199 2782 Q5T750 XP32 Skin-specific protein 32 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 2 1 1 1 2 2 1 1 2 1 53.605 53.817 2 0.0056107 60834 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 117.18 38.561 466770000 0 0 0 0 28573000 56744000 29273000 131670000 22646000 56796000 44911000 17181000 24703000 29037000 25236000 51311 2782 46061 430339;430340;430341;430342;430343;430344;430345;430346;430347;430348;430349;430350;430351;430352;430353 340015;340016;340017;340018;340019;340020;340021;340022;340023 340015 9 TFGVSPLRR Unmodified 1031.5876 0.58761301 2782 Q5T750 XP32 Skin-specific protein 32 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 42.421 42.656 2 0.029468 47878 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 94.302 71.231 230280000 0 0 0 90477000 0 17406000 15757000 18430000 1437300 15029000 13225000 24780000 20791000 0 12949000 51312 2782 46062 430354;430355;430356;430357;430358;430359;430360;430361;430362;430363 340024;340025;340026;340027 340024 2 TFGYPPLTK Unmodified 1022.5437 0.54368251 2633 Q16773 CCBL1 Kynurenine--oxoglutarate transaminase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 67.596 61.611 2 0.039846 82060 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.91 40.355 137040000 73038000 59117000 4881700 0 0 0 0 0 0 0 0 0 0 0 0 51313 2633 46063 430364;430365;430366 340028 340028 1 TFHGAGLVVPVDK Unmodified 1338.7296 0.7295858 4708 Q9NWY4 C4orf27 UPF0609 protein C4orf27 yes yes 0 0 0 By MS/MS By matching By MS/MS 2 0 5 2 1 2 68.724 62.743 2;3 2.9059E-13 83887 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 152.54 131.09 439450000 321820000 66650000 50986000 0 0 0 0 0 0 0 0 0 0 0 0 51314 4708 46064 430367;430368;430369;430370;430371 340029;340030;340031;340032;340033 340030 4 TFIAIKPDGVQR Unmodified 1343.7561 0.75613491 1138;1022 P22392;P15531 NME2;NME1 Nucleoside diphosphate kinase B;Nucleoside diphosphate kinase A no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 52 4 4 4 5 6 6 5 4 8 2 2 2 58.289 58.414 2;3 3.3938E-23 64506 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 152.28 139.7 53663000000 0 0 0 2109000000 3764700000 4301200000 7226400000 7781600000 6907600000 4853100000 5950700000 9004300000 205010000 364200000 1195400000 51315 1138;1022 46065 430372;430373;430374;430375;430376;430377;430378;430379;430380;430381;430382;430383;430384;430385;430386;430387;430388;430389;430390;430391;430392;430393;430394;430395;430396;430397;430398;430399;430400;430401;430402;430403;430404;430405;430406;430407;430408;430409;430410;430411;430412;430413;430414;430415;430416;430417;430418;430419;430420;430421;430422;430423 340034;340035;340036;340037;340038;340039;340040;340041;340042;340043;340044;340045;340046;340047;340048;340049;340050;340051;340052;340053;340054;340055;340056;340057;340058;340059;340060;340061;340062;340063;340064;340065;340066;340067;340068;340069;340070;340071;340072;340073;340074;340075;340076;340077;340078;340079;340080;340081;340082;340083;340084;340085;340086;340087;340088;340089;340090;340091;340092;340093;340094;340095;340096;340097;340098;340099 340037 54 TFIFLNAK Unmodified 952.5382 0.53820321 448 O60934 NBN Nibrin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 78.497 77.667 2 0.0092881 89868 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 83.377 54.865 93080000 21783000 0 0 5796400 0 9382600 5993600 0 6463200 0 7306600 12065000 0 8898500 15391000 51316 448 46066 430424;430425;430426;430427;430428;430429;430430;430431;430432;430433 340100;340101;340102;340103;340104;340105;340106;340107;340108;340109 340100 9 TFIIGISGVTNSGK Unmodified 1392.7613 0.76127986 4705 Q9NWW6 NMRK1 Nicotinamide riboside kinase 1 yes yes 0 0 0 By MS/MS 2 0 1 1 85.816 77.685 2 0.0012464 101388 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 100.55 77.913 6892000 6892000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51317 4705 46067 430434 340110 340110 1 TFITQQGIK Unmodified 1034.576 0.57604528 3786 Q96CW1 AP2M1 AP-2 complex subunit mu yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47.885 46.832 2 0.0014833 64217 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 136.11 73.399 959010000 301100000 295380000 41635000 18417000 15498000 34790000 21281000 19276000 17806000 33710000 31137000 36992000 28582000 21312000 42090000 51318 3786 46068 430435;430436;430437;430438;430439;430440;430441;430442;430443;430444;430445;430446;430447;430448;430449 340111;340112;340113;340114;340115;340116;340117;340118;340119;340120;340121 340117 9 TFIVGAQMNVK Oxidation (M) 1222.638 0.63799361 1502 P46379 BAG6 Large proline-rich protein BAG6 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.683 49.839 2 0.00029945 56298 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 84.743 63.215 199550000 0 0 0 17081000 13979000 16846000 19748000 15263000 13228000 11470000 16561000 25725000 20107000 13117000 16431000 51319 1502 46069 430450;430451;430452;430453;430454;430455;430456;430457;430458;430459;430460;430461 340122;340123;340124;340125;340126;340127;340128;340129;340130;340131;340132;340133;340134 340131 2374 13 TFIVPAIK Unmodified 887.54804 0.54803961 2164 Q08AD1 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 74.288 74.443 2 0.033696 85438 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 53.554 40.566 30665000 0 0 0 0 0 5501900 0 3496700 4789400 3972400 0 0 0 3797600 9106800 51320 2164 46070 430462;430463;430464;430465;430466;430467 340135;340136;340137 340136 3 TFLAVKPDGVQR Unmodified 1329.7405 0.74048484 2257 Q13232 NME3 Nucleoside diphosphate kinase 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 50.965 51.02 3 0.00029285 57331 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 66.498 59.329 159070000 0 0 0 7255100 12705000 21068000 16963000 14159000 0 20011000 29932000 36978000 0 0 0 51321 2257 46071 430468;430469;430470;430471;430472;430473;430474;430475;430476 340138;340139;340140;340141;340142;340143;340144;340145;340146;340147;340148 340144 11 TFLEFYEEK Unmodified 1204.5652 0.56520582 296 O43148 RNMT mRNA cap guanine-N7 methyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 78.467 77.119 2 0.0042902 88728 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.308 64.568 107440000 16472000 37712000 20141000 2331300 0 2926300 3588000 3417300 0 5094500 4044700 0 0 3786700 7923400 51322 296 46072 430477;430478;430479;430480;430481;430482;430483;430484;430485;430486;430487;430488;430489 340149;340150;340151;340152;340153;340154;340155;340156;340157;340158 340151 9 TFLESPLDVGIK Unmodified 1317.718 0.71801807 3520 Q8TEU7 RAPGEF6 Rap guanine nucleotide exchange factor 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 84.371 84.469 2 0.00089612 97936 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 85.377 74.226 55682000 0 0 0 0 3279400 4748700 3739400 6846000 4596400 7794700 0 10526000 0 3384100 10768000 51323 3520 46073 430490;430491;430492;430493;430494;430495;430496;430497;430498;430499 340159;340160;340161;340162;340163;340164;340165;340166;340167;340168;340169;340170 340159 12 TFLEYLEYEK Unmodified 1333.6442 0.64418442 4370 Q9H2M9 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes yes 0 0 0 By MS/MS 2 0 1 1 89.548 81.418 2 0.022039 105919 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.643 53.863 16350000 16350000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51324 4370 46074 430500 340171 340171 1 TFLFISDEK Unmodified 1098.5597 0.55972651 2713 Q56NI9 ESCO2 N-acetyltransferase ESCO2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 77.857 77.884 2 0.009035 89808 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 67.897 44.855 89998000 0 0 0 3169400 4829800 4405700 4871900 4850700 5444600 17791000 13997000 30638000 0 0 0 51325 2713 46075 430501;430502;430503;430504;430505;430506;430507;430508;430509 340172;340173;340174;340175;340176;340177;340178 340177 7 TFLNFSVDK Unmodified 1069.5444 0.5444108 572 O76027 ANXA9 Annexin A9 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.511 76.569 2 0.010961 88269 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 63.534 33.367 43204000 0 0 0 1445800 2269000 2614700 4262000 4435500 3269500 2128700 3554100 6457300 3854800 2620400 6292000 51326 572 46076 430510;430511;430512;430513;430514;430515;430516;430517;430518;430519;430520;430521 340179;340180 340179 2 TFLRPSPEDEAIYGPNTK Unmodified 2034.0058 0.0058202445 4867 Q9UDY2 TJP2 Tight junction protein ZO-2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 65.417 65.492 3 3.7936E-05 74980 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 62.203 46.781 66421000 0 0 0 6131500 3229600 0 0 6674600 5454900 10680000 8395200 9926300 0 0 15929000 51327 4867 46077 430522;430523;430524;430525;430526;430527;430528;430529;430530;430531 340181;340182;340183;340184;340185;340186;340187 340181 6 TFLTNDQTK Unmodified 1066.5295 0.52948901 1601;32 P49792;P0DJD0;P0DJD1;A6NKT7;Q7Z3J3 RANBP2;RGPD1;RGPD2;RGPD3;RGPD4 E3 SUMO-protein ligase RanBP2;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RanBP2-like and GRIP domain-containing protein 3;RanBP2-like and GRIP domain-containing protein 4 no no 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 34.229 29.437 2 1.4413E-06 38810 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 163.99 96.953 146630000 4921400 139220000 2493400 0 0 0 0 0 0 0 0 0 0 0 0 51328 1601;32 46078 430532;430533;430534 340188;340189 340188 2 TFLVDPNLDLSIR Unmodified 1501.814 0.81404372 4126 Q9BSJ2 TUBGCP2 Gamma-tubulin complex component 2 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 89.941 90.068 2 0.017648 104541 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 49.35 45.818 2243600 0 0 0 0 0 0 0 0 0 1219300 0 0 0 0 1024400 51329 4126 46079 430535;430536 340190 340190 1 TFLVGER Unmodified 820.4443 0.44430282 1211 P26641 EEF1G Elongation factor 1-gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.957 44.129 2 0.023356 48206 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 92.467 53.648 1208600000 0 0 0 56374000 44092000 130900000 58573000 68218000 32408000 95492000 149820000 114880000 71919000 109490000 276460000 51330 1211 46080 430537;430538;430539;430540;430541;430542;430543;430544;430545;430546;430547;430548 340191;340192;340193;340194;340195;340196;340197;340198;340199;340200;340201;340202;340203;340204 340199 14 TFLVNSAFDGHQPLPK Unmodified 1769.9101 0.91006937 4754 Q9NYW8 RBAK RB-associated KRAB zinc finger protein yes yes 0 0 0 By MS/MS 2 0 1 1 82.51 74.379 3 0.00020135 97411 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.374 56.617 13278000 13278000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51331 4754 46081 430549 340205 340205 1 TFLVPEIK Unmodified 945.55352 0.55351892 4801 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 77.035 77.094 2 0.017303 88879 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 65.88 27.088 85450000 0 0 0 4741100 5772000 7692900 6736700 5919800 5980700 8362900 8700800 9749700 0 7303600 14490000 51332 4801 46082 430550;430551;430552;430553;430554;430555;430556;430557;430558;430559;430560 340206;340207;340208;340209;340210;340211;340212 340210 7 TFMDMDQDSEDEK Oxidation (M) 1605.5811 0.58106817 2647 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 0 1 0 By MS/MS 2 0 1 1 34.7 29.944 2 4.107E-08 39473 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.06 107.06 10259000 0 10259000 0 0 0 0 0 0 0 0 0 0 0 0 0 51333 2647 46083 430561 340213;340214 340214 4313 2 TFMDMDQDSEDEK Unmodified 1589.5862 0.58615355 2647 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 0 0 0 By MS/MS 2 0 1 1 53.203 47.411 2 0.004346 61163 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.346 67.12 66233000 0 66233000 0 0 0 0 0 0 0 0 0 0 0 0 0 51334 2647 46083 430562 340215 340215 1 TFMDMDQDSEEEK Oxidation (M) 1619.5967 0.59671823 4633 Q9NTI5 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes yes 0 1 0 By MS/MS 2 0 1 1 35.723 30.876 2 5.3235E-21 40281 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.71 138.71 16708000 0 16708000 0 0 0 0 0 0 0 0 0 0 0 0 0 51335 4633 46084 430563 340216;340217 340216 6031 2 TFMDMDQDSEEEK Unmodified 1603.6018 0.60180361 4633 Q9NTI5 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes yes 0 0 0 By MS/MS 2 0 1 1 53.671 47.879 2 0.0012941 61968 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.653 90.653 16300000 0 16300000 0 0 0 0 0 0 0 0 0 0 0 0 0 51336 4633 46084 430564 340218 340218 1 TFNIQSVNR Unmodified 1077.5567 0.55670682 36 A8K2U0 A2ML1 Alpha-2-macroglobulin-like protein 1 yes yes 0 0 0 By matching By MS/MS By matching 10 0 3 1 1 1 48.155 48.257 2 0.0034849 54441 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 103.74 81.247 28354000 0 0 0 16477000 0 0 0 6179100 0 0 0 5698300 0 0 0 51337 36 46085 430565;430566;430567 340219 340219 1 TFNLTAGSLESTEPIYVYK Unmodified 2132.0678 0.067751799 2940 Q6P996 PDXDC1 Pyridoxal-dependent decarboxylase domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 86.562 86.719 2 2.6822E-17 100278 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 119.01 106.03 17459000 0 0 0 0 0 0 0 0 0 7293400 3144000 0 0 0 7021700 51338 2940 46086 430568;430569;430570;430571 340220;340221;340222;340223 340221 4 TFNPGAGLPTDK Unmodified 1216.6088 0.60880197 892 P09661 SNRPA1 U2 small nuclear ribonucleoprotein A' yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 55.081 53.761 2 0.00022917 60774 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 83.869 64.092 2663300000 43117000 1686500000 13406000 37553000 58034000 66120000 57829000 60653000 53368000 83745000 75995000 107020000 96214000 103650000 120150000 51339 892 46087 430572;430573;430574;430575;430576;430577;430578;430579;430580;430581;430582;430583;430584;430585;430586;430587 340224;340225;340226;340227;340228;340229;340230;340231;340232;340233;340234;340235;340236;340237;340238;340239;340240;340241 340232 17 TFNPGAGLPTDKK Unmodified 1344.7038 0.70376498 892 P09661 SNRPA1 U2 small nuclear ribonucleoprotein A' yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.33 3.93 6 1 8 2 3 2 1 1 1 1 1 1 1 1 47.358 44.827 2;3 0.0070494 50136 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 23.371 15.484 647230000 189950000 250180000 47166000 0 13681000 0 18114000 22273000 0 0 17694000 22309000 22744000 16987000 26125000 51340 892 46088 430588;430589;430590;430591;430592;430593;430594;430595;430596;430597;430598;430599;430600;430601;430602 340242;340243;340244;340245;340246;340247;340248;340249 340248 6 TFNQDDSADLR Unmodified 1280.5633 0.56330834 5191 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 33.192 33.144 2 0.00025648 36332 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 105.4 89.855 12679000 0 0 0 0 6879200 0 0 0 0 0 0 0 5800100 0 0 51341 5191 46089 430603;430604;430605;430606;430607 340250;340251;340252;340253;340254 340251 5 TFNQVVK Unmodified 834.45995 0.45995289 3686 Q92917 GPKOW G patch domain and KOW motifs-containing protein yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 26.613 26.659 2 0.023384 29032 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 88.029 39.855 175970000 0 0 0 12929000 16054000 25826000 23004000 14250000 20356000 32298000 31250000 0 0 0 0 51342 3686 46090 430608;430609;430610;430611;430612;430613;430614;430615 340255;340256;340257 340257 3 TFNSELYSLNDYKPPISK Unmodified 2115.0524 0.052436086 5050 Q9UPN6 SCAF8 Protein SCAF8 yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.071 79.118 3 3.3257E-06 91296 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 76.378 72.774 164290000 0 0 0 2581900 4854800 11515000 4971000 14864000 0 26934000 16497000 20897000 8339400 10217000 42620000 51343 5050 46091 430616;430617;430618;430619;430620;430621;430622;430623;430624;430625;430626 340258;340259;340260;340261;340262;340263;340264;340265 340258 8 TFNSFEGSK Acetyl (Protein N-term) 1057.4716 0.47163978 2022 P98170 XIAP E3 ubiquitin-protein ligase XIAP yes yes 1 0 0 By MS/MS 1 0 1 1 103.79 104.68 2 0.057422 96194 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 57.96 47.546 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51344 2022 46092 430627 340266 340266 1 TFNTSTGGLLLPSDTK Unmodified 1650.8465 0.84646606 973 P12956 XRCC6 X-ray repair cross-complementing protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 17 1 2 1 2 2 1 1 2 1 1 1 2 75.676 75.749 2;3 2.0918E-28 86959 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 172.76 152.45 1010300000 0 0 0 54278000 51933000 71693000 69337000 56428000 53722000 83425000 118730000 122370000 65011000 84331000 179050000 51345 973 46093 430628;430629;430630;430631;430632;430633;430634;430635;430636;430637;430638;430639;430640;430641;430642;430643;430644 340267;340268;340269;340270;340271;340272;340273;340274;340275;340276;340277;340278 340271 12 TFPEPAQLRR Unmodified 1213.6568 0.65675521 3382 Q8NAF0 ZNF579 Zinc finger protein 579 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 46.989 47.147 3 0.021056 53822 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 35.541 27.975 109520000 0 0 0 13981000 11272000 0 0 0 0 17450000 0 22748000 13428000 12147000 18497000 51346 3382 46094 430645;430646;430647;430648;430649;430650;430651 340279;340280 340279 2 TFPLDVGSIVGYSGQK Unmodified 1666.8566 0.85663681 1533 P48147 PREP Prolyl endopeptidase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.33 2.98 5 1 2 2 1 1 90.993 87.513 2 8.521E-31 109477 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 162.23 153.71 119540000 8136400 104560000 314840 0 0 0 0 0 0 0 0 0 0 0 6527200 51347 1533 46095 430652;430653;430654;430655;430656;430657 340281;340282;340283;340284 340282 4 TFPSGGEEEAK Unmodified 1150.5142 0.51423288 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 23.034 23.243 2 0.027602 25257 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 51.066 51.066 58126000 0 0 0 0 0 6040300 8264300 0 685660 9037500 9375400 0 14425000 10298000 0 51348 4285 46096 430658;430659;430660;430661;430662;430663;430664 340285 340285 1 TFPSNPESFITR Unmodified 1394.683 0.68302954 5292 Q9Y6Q9 NCOA3 Nuclear receptor coactivator 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.316 77.373 2 0.0066093 88877 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.73 47.217 119380000 0 0 0 6308300 5811000 10539000 7221500 7219300 6172600 13205000 10382000 14448000 7638100 11939000 18500000 51349 5292 46097 430665;430666;430667;430668;430669;430670;430671;430672;430673;430674;430675;430676 340286;340287;340288;340289;340290;340291;340292;340293;340294;340295;340296;340297 340290 12 TFPVLLR Unmodified 844.51707 0.51707383 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.1 76.162 2 0.026956 87161 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.944 46.365 270560000 0 0 0 15279000 15731000 17038000 16573000 19869000 10981000 21369000 20731000 29556000 18200000 27130000 58100000 51350 1986 46098 430677;430678;430679;430680;430681;430682;430683;430684;430685;430686;430687;430688 340298;340299;340300;340301;340302;340303;340304;340305;340306;340307 340301 10 TFQAFELK Unmodified 982.51238 0.51238239 392 O60293 ZFC3H1 Zinc finger C3H1 domain-containing protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 68.388 68.528 2 0.0069006 77774 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 91.626 77.955 35722000 0 0 0 3062000 0 0 0 0 0 6302500 4787100 5504400 4578000 4505500 6982800 51351 392 46099 430689;430690;430691;430692;430693;430694;430695 340308;340309;340310;340311;340312;340313;340314 340311 7 TFQDGATK Unmodified 866.4134 0.41339662 3094;456 Q7Z460;O75122 CLASP1;CLASP2 CLIP-associating protein 1;CLIP-associating protein 2 no no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.91 3.42 2 1 8 1 2 1 1 1 1 1 1 1 1 8.8981 8.3711 2 0.012232 7076 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 75.109 45.733 71233000 163590 49441000 0 0 2881000 3429100 3246300 3068600 2951300 2161700 0 2563400 0 1327000 0 51352 3094;456 46100 430696;430697;430698;430699;430700;430701;430702;430703;430704;430705;430706 340315;340316;340317;340318 340318 4 TFQEEFMPVETFSEFLDVAGLLSEITDPESFLK Unmodified 3794.8165 0.81647765 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 By MS/MS 2 0 1 1 107.78 99.654 3 0.00079617 127750 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 32.668 31.027 4982000 4982000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51353 2775 46101 430707 340319 340319 1 TFQFQPSK Unmodified 981.49198 0.4919813 3531 Q8WTV0 SCARB1 Scavenger receptor class B member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 43.878 44.188 2 0.010604 49676 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 79.116 28.15 77765000 0 0 0 0 0 11392000 0 0 6423900 0 0 33282000 14053000 12615000 0 51354 3531 46102 430708;430709;430710;430711;430712;430713 340320;340321;340322;340323;340324;340325 340322 6 TFQGHTNEVNAIK Unmodified 1457.7263 0.72629134 4270;443;4091 Q9BZK7;O60907;Q9BQ87 TBL1XR1;TBL1X;TBL1Y F-box-like/WD repeat-containing protein TBL1XR1;F-box-like/WD repeat-containing protein TBL1X;F-box-like/WD repeat-containing protein TBL1Y no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.03 3.35 5 3 23 4 2 2 2 2 2 2 1 2 2 2 2 2 2 2 32.263 31.127 2;3 5.9679E-56 43963 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 202 151.53 3415300000 998520000 439660000 673030000 52566000 79404000 105440000 96549000 12111000 103280000 139620000 150900000 166430000 115730000 130660000 151420000 51355 4270;443;4091 46103 430714;430715;430716;430717;430718;430719;430720;430721;430722;430723;430724;430725;430726;430727;430728;430729;430730;430731;430732;430733;430734;430735;430736;430737;430738;430739;430740;430741;430742;430743;430744 340326;340327;340328;340329;340330;340331;340332;340333;340334;340335;340336;340337;340338;340339;340340;340341;340342;340343;340344;340345;340346;340347;340348;340349;340350 340339 20 TFQGPNCPATCGRVLPDGK Unmodified 2073.9724 0.9724284 2341 Q13685 AAMP Angio-associated migratory cell protein yes yes 0 0 1 By MS/MS 2 0 1 1 59.806 51.58 3 0.00028206 70009 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.693 49.761 20733000 20733000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51356 2341 46104 430745 340351;340352 340352 2 TFQLQLLSPSSSIVPAFNTGTITQVIK Unmodified 2889.5852 0.58515998 362 O43747 AP1G1 AP-1 complex subunit gamma-1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 100.63 94.212 3 2.3647E-21 118773 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.517 76.41 26339000 13896000 12442000 0 0 0 0 0 0 0 0 0 0 0 0 0 51357 362 46105 430746;430747 340353;340354;340355 340354 3 TFQMAEYLK Oxidation (M) 1145.5427 0.54269624 1348 P35250 RFC2 Replication factor C subunit 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.24 2.35 2 19 1 1 2 2 1 2 1 1 2 2 1 2 2 1 48.43 47.825 2 0.0042333 54399 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 75.109 35.006 83820000 6817900 0 3523000 2446200 6907500 4638500 6909600 3475700 2822900 12657000 11901000 0 11572000 10148000 0 51358 1348 46106 430748;430749;430750;430751;430752;430753;430754;430755;430756;430757;430758;430759;430760;430761;430762;430763;430764;430765;430766;430767;430768 340356;340357;340358;340359;340360;340361;340362;340363;340364;340365;340366;340367;340368;340369;340370;340371;340372;340373 340366 2050 16 TFQMAEYLK Unmodified 1129.5478 0.54778161 1348 P35250 RFC2 Replication factor C subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 75.402 74.263 2 0.0037017 85518 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 101.64 45.633 556900000 86052000 292980000 9169600 7029300 7657000 14361000 9908300 14796000 15970000 15922000 16486000 13591000 10458000 14632000 27883000 51359 1348 46106 430769;430770;430771;430772;430773;430774;430775;430776;430777;430778;430779;430780;430781;430782;430783;430784 340374;340375;340376;340377;340378;340379;340380;340381;340382;340383;340384;340385;340386;340387 340382 13 TFQTLECQHK Unmodified 1290.6027 0.60267073 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 0 By MS/MS 2 0 1 1 30.501 27.305 3 0.010094 34856 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 50.284 37.707 12096000 0 0 12096000 0 0 0 0 0 0 0 0 0 0 0 0 51360 2804 46107 430785 340388 340388 1 TFRIEEIPLDQVDIDK Unmodified 1930.0048 0.004757612 3702 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 0 0 1 By MS/MS 2 0 1 1 89.974 81.844 3 0.00076469 106315 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.691 54.285 34697000 34697000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51361 3702 46108 430786 340389 340389 1 TFSEILNR Unmodified 978.51345 0.51344502 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 55.473 55.525 2 0.0068886 62619 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 92.187 41.484 201280000 0 0 0 15423000 14017000 26216000 17320000 23586000 13188000 20030000 0 25739000 22562000 23196000 0 51362 2392 46109 430787;430788;430789;430790;430791;430792;430793;430794;430795;430796 340390;340391;340392;340393;340394;340395;340396;340397;340398 340393 9 TFSEVLAEK Unmodified 1022.5284 0.52842638 464 O75152 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 2 1 1 2 1 1 1 2 1 1 1 53.705 50.833 2 0.0052093 57544 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 80.219 60.515 106470000 0 64037000 5354200 0 0 0 21204000 15877000 0 0 0 0 0 0 0 51363 464 46110 430797;430798;430799;430800;430801;430802;430803;430804;430805;430806;430807;430808;430809;430810 340399;340400;340401;340402;340403;340404;340405;340406;340407;340408;340409;340410;340411;340412;340413 340407 15 TFSFAIPLIEK Unmodified 1264.7067 0.7067251 4588 Q9NR30 DDX21 Nucleolar RNA helicase 2 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 95.627 91.632 2 0.005428 108316 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.067 49.673 14555000 12089000 0 0 0 0 0 0 0 0 0 0 0 0 0 2466200 51364 4588 46111 430811;430812 340414;340415 340414 2 TFSGQTHGFVHR Unmodified 1372.6636 0.6636315 3796 Q96DG6 CMBL Carboxymethylenebutenolidase homolog yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 2 1 2 26.944 27.297 2;3 0.00010322 28449 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 72.089 62.556 177960000 0 0 0 0 0 17738000 0 8263300 12289000 9855200 0 27238000 18949000 29239000 54384000 51365 3796 46112 430813;430814;430815;430816;430817;430818;430819;430820;430821;430822 340416;340417;340418;340419;340420;340421;340422;340423;340424 340424 8 TFSGQTHGFVHRK Unmodified 1500.7586 0.75859452 3796 Q96DG6 CMBL Carboxymethylenebutenolidase homolog yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 19.978 20.417 3 0.00020936 18786 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.46 66.076 53398000 0 0 0 0 0 0 0 0 3246700 0 4219200 9270600 0 7531800 29130000 51366 3796 46113 430823;430824;430825;430826;430827 340425;340426;340427;340428 340426 4 TFSHELSDFGLESTAGEIPVVAIR Unmodified 2574.2966 0.29658254 1270 P30101 PDIA3 Protein disulfide-isomerase A3 yes yes 0 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 1 3 96.34 91.098 3 0.00017985 114921 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 50.77 43.148 182040000 53036000 129000000 0 0 0 0 0 0 0 0 0 0 0 0 0 51367 1270 46114 430828;430829;430830;430831 340429;340430;340431;340432;340433 340431 5 TFSHELSDFGLESTAGEIPVVAIRTAK Unmodified 2874.4763 0.47633782 1270 P30101 PDIA3 Protein disulfide-isomerase A3 yes yes 0 0 1 By MS/MS 3 0 1 1 92.024 88.804 4 0.00021993 106326 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 38.746 36.114 8401300 0 8401300 0 0 0 0 0 0 0 0 0 0 0 0 0 51368 1270 46115 430832 340434 340434 1 TFSNVFGR Unmodified 926.46102 0.46101552 3061 Q7LBC6 KDM3B Lysine-specific demethylase 3B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 54.105 54.314 2 0.0074075 61921 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 124.59 76.421 564670000 0 0 0 0 34403000 44778000 45605000 47813000 35774000 49237000 58322000 77405000 57598000 41159000 72575000 51369 3061 46116 430833;430834;430835;430836;430837;430838;430839;430840;430841;430842;430843;430844 340435;340436;340437;340438;340439;340440;340441;340442;340443;340444;340445 340437 7 TFSQEVSR Unmodified 952.46141 0.46140945 2833 Q5VZK9 LRRC16A Leucine-rich repeat-containing protein 16A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.567 21.772 2 0.0063739 22537 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 101.41 80.857 164930000 0 0 0 9193200 7499100 16279000 11164000 12394000 7946700 16824000 19347000 15317000 15417000 16034000 17516000 51370 2833 46117 430845;430846;430847;430848;430849;430850;430851;430852;430853;430854;430855;430856 340446;340447;340448;340449;340450;340451;340452;340453;340454;340455;340456;340457 340447 12 TFSQSSHLVQHR Unmodified 1425.7113 0.71130998 2868 Q6DD87 ZNF787 Zinc finger protein 787 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 20.312 20.545 3 1.5036E-05 20151 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.64 87.59 65656000 0 0 0 19486000 0 0 0 0 0 0 0 0 0 0 46170000 51371 2868 46118 430857;430858 340458;340459 340458 2 TFSSEEEEANYWK Unmodified 1618.6787 0.67873203 4729 Q9NXR1 NDE1 Nuclear distribution protein nudE homolog 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching 8.4 3.2 1 4 1 1 1 1 1 60.641 59.553 2 4.5429E-22 75388 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 147.4 121.6 27493000 0 17842000 0 0 0 1672600 3111600 3037500 1830200 0 0 0 0 0 0 51372 4729 46119 430859;430860;430861;430862;430863 340460;340461 340461 1 TFSSIPVSR Unmodified 992.5291 0.52909508 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.961 48.124 2 0.009035 54116 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 67.897 29.347 386970000 0 0 0 23898000 23301000 35818000 26625000 26756000 20928000 34553000 38234000 41828000 33672000 32710000 48650000 51373 2392 46120 430864;430865;430866;430867;430868;430869;430870;430871;430872;430873;430874;430875 340462;340463;340464;340465;340466;340467 340464 4 TFSSTESLR Unmodified 1026.4982 0.49818889 2156 Q08379 GOLGA2 Golgin subfamily A member 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 31.582 31.724 2 0.0052698 34537 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 78.334 63.559 65289000 0 0 0 5614900 8060500 0 7756300 5594800 0 8693300 0 12730000 0 0 16839000 51374 2156 46121 430876;430877;430878;430879;430880;430881;430882;430883 340468;340469;340470;340471;340472;340473;340474;340475 340471 8 TFSVSLQK Unmodified 908.49673 0.49673232 3471 Q8TAG9 EXOC6 Exocyst complex component 6 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 57.138 50.128 2 0.022229 65240 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.753 34.992 51111000 22259000 28852000 0 0 0 0 0 0 0 0 0 0 0 0 0 51375 3471 46122 430884;430885 340476;340477 340476 2 TFSVTGWK Unmodified 924.47052 0.47051757 2998 Q6YP21 CCBL2 Kynurenine--oxoglutarate transaminase 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 70.041 64.108 2 0.01816 85001 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.142 29.501 93331000 59276000 24829000 9225900 0 0 0 0 0 0 0 0 0 0 0 0 51376 2998 46123 430886;430887;430888 340478;340479 340478 2 TFSVWYVPEVTGTHK Unmodified 1749.8726 0.87262123 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 82.602 82.748 3 6.7133E-10 95353 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.237 93.237 89140000 0 0 0 0 0 7694900 1239200 4097600 3421200 5210600 5148200 6181500 0 9746400 46401000 51377 1124 46124 430889;430890;430891;430892;430893;430894;430895;430896;430897 340480;340481;340482;340483;340484;340485;340486;340487 340483 8 TFSWASVTSK Unmodified 1112.5502 0.55022446 2263 Q13283 G3BP1 Ras GTPase-activating protein-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.516 67.598 2 0.0015746 76878 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.15 80.563 686280000 0 0 0 75398000 51422000 69387000 69110000 47313000 60818000 2673000 68283000 61867000 49090000 40397000 90525000 51378 2263 46125 430898;430899;430900;430901;430902;430903;430904;430905;430906;430907;430908;430909 340488;340489;340490;340491;340492;340493;340494;340495;340496;340497;340498;340499 340490 6 TFSYAGFEMQPK Oxidation (M) 1420.6333 0.63330216 4065 Q99832 CCT7 T-complex protein 1 subunit eta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.94 3.84 6 1 11 2 4 1 1 1 1 1 1 1 1 1 1 1 1 65.172 63.557 2 1.7533E-06 72397 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 112.71 106.98 2949200000 130110000 1810300000 66753000 43868000 60657000 82549000 90508000 62329000 66317000 110920000 98358000 108760000 0 76530000 141290000 51379 4065 46126 430910;430911;430912;430913;430914;430915;430916;430917;430918;430919;430920;430921;430922;430923;430924;430925;430926;430927 340500;340501;340502;340503;340504;340505;340506;340507;340508;340509;340510;340511;340512;340513;340514;340515;340516;340517;340518;340519 340503 5572 19 TFSYAGFEMQPK Unmodified 1404.6384 0.63838754 4065 Q99832 CCT7 T-complex protein 1 subunit eta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 76.239 74.886 2;3 3.3364E-08 86596 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 125.97 118.32 4962300000 276770000 3419800000 52984000 33049000 46691000 92414000 54948000 107940000 51109000 121880000 123390000 152590000 65249000 103600000 259920000 51380 4065 46126 430928;430929;430930;430931;430932;430933;430934;430935;430936;430937;430938;430939;430940;430941;430942;430943;430944 340520;340521;340522;340523;340524;340525;340526;340527;340528;340529;340530;340531;340532;340533;340534;340535;340536;340537 340522 16 TFSYPLDLLLK Unmodified 1308.7329 0.73293985 5093 Q9Y296 TRAPPC4 Trafficking protein particle complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 99.394 92.972 2 0.010965 117514 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.95 62.174 27439000 14169000 13270000 0 0 0 0 0 0 0 0 0 0 0 0 0 51381 5093 46127 430945;430946 340538;340539 340539 2 TFTAWCNSHLR Unmodified 1391.6405 0.64045322 356;971;1359 O43707;P12814;P35609 ACTN4;ACTN1;ACTN2 Alpha-actinin-4;Alpha-actinin-1;Alpha-actinin-2 no no 0 0 0 By matching By MS/MS By matching By matching By MS/MS 10 0 5 1 1 1 1 1 51.771 52.182 3 0.014532 57798 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.777 46.504 33767000 0 0 0 0 0 0 0 0 1386400 0 0 8671600 3001300 2565500 18142000 51382 356;971;1359 46128 430947;430948;430949;430950;430951 340540;340541 340540 2 TFTAWCNSHLRK Unmodified 1519.7354 0.73541624 356;971;1359 O43707;P12814;P35609 ACTN4;ACTN1;ACTN2 Alpha-actinin-4;Alpha-actinin-1;Alpha-actinin-2 no no 0 0 1 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 41.569 41.989 3 0.028999 45690 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.847 31.969 64658000 0 0 0 0 0 10096000 0 0 3758000 0 0 15842000 0 0 34962000 51383 356;971;1359 46129 430952;430953;430954;430955 340542 340542 0 TFTCTAAYPESK Unmodified 1374.6126 0.61256672 751 P01876 IGHA1 Ig alpha-1 chain C region yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 39.896 40.011 2 0.0033507 44344 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 70.977 62.445 22672000 0 0 0 6667300 0 0 0 0 0 6158400 7687600 0 2158400 0 0 51384 751 46130 430956;430957;430958;430959 340543;340544;340545 340544 3 TFTDCFNCLPIAAIVDEK Unmodified 2112.986 0.98601278 1873;1872;1381 P62140;P62136;P36873 PPP1CB;PPP1CA;PPP1CC Serine/threonine-protein phosphatase PP1-beta catalytic subunit;Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit no no 0 0 0 By MS/MS 2.33 0.471 2 1 3 98.364 94.105 2;3 8.6436E-28 116181 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 162.88 149.47 50134000 0 50134000 0 0 0 0 0 0 0 0 0 0 0 0 0 51385 1873;1872;1381 46131 430960;430961;430962 340546;340547 340546 2 TFTEMDSHEEK Unmodified 1352.5554 0.55544577 1538 P48444 ARCN1 Coatomer subunit delta yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 1 2 2 2 2 2 2 2 2 2 2 22.379 22.607 2;3 0.00020354 23041 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 107.21 98.98 371710000 0 0 0 15084000 2504500 27314000 19759000 18928000 14655000 37782000 44117000 56537000 33650000 40068000 61317000 51386 1538 46132 430963;430964;430965;430966;430967;430968;430969;430970;430971;430972;430973;430974;430975;430976;430977;430978;430979;430980;430981;430982;430983;430984;430985 340548;340549;340550;340551;340552;340553;340554;340555;340556;340557;340558;340559 340557 11 TFTEMDSHEEK Oxidation (M) 1368.5504 0.55036039 1538 P48444 ARCN1 Coatomer subunit delta yes yes 0 1 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 16 1 2 2 1 2 2 2 1 1 2 11.095 11.184 2;3 0.0065156 9837 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 41.689 40.699 86139000 0 0 0 1963700 7515700 15964000 3642700 8157200 8547100 17169000 0 4240100 4033600 14906000 0 51387 1538 46132 430986;430987;430988;430989;430990;430991;430992;430993;430994;430995;430996;430997;430998;430999;431000;431001 340560;340561;340562;340563 340563 2450 2 TFTFDTVFGPESK Unmodified 1474.698 0.6980109 5188 Q9Y496 KIF3A Kinesin-like protein KIF3A yes yes 0 0 0 By MS/MS 2 0 1 1 89.976 85.103 2 3.8634E-05 105718 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.74 116.22 33583000 0 33583000 0 0 0 0 0 0 0 0 0 0 0 0 0 51388 5188 46133 431002 340564 340564 1 TFTPNIISR Unmodified 1047.5713 0.57129425 810 P05423 POLR3D DNA-directed RNA polymerase III subunit RPC4 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 61.822 61.217 2 0.0353 70686 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 46.158 34.79 5838400 0 0 0 2686400 3152000 0 0 0 0 0 0 0 0 0 0 51389 810 46134 431003;431004 340565 340565 1 TFTTQETITNAETAK Unmodified 1654.805 0.80499517 829;93 P06744;CON__Q3ZBD7 GPI Glucose-6-phosphate isomerase no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.49 3.96 2 16 3 16 5 13 3 1 1 1 1 1 1 1 2 2 1 2 2 54.506 52.996 2;3 0 63151 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 283.43 248.67 + 9680100000 549210000 7526800000 109100000 23106000 14905000 23918000 24264000 19917000 0 21596000 254490000 239350000 14666000 161350000 697370000 51390 829;93 46135 431005;431006;431007;431008;431009;431010;431011;431012;431013;431014;431015;431016;431017;431018;431019;431020;431021;431022;431023;431024;431025;431026;431027;431028;431029;431030;431031;431032;431033;431034;431035;431036;431037;431038;431039;431040;431041 340566;340567;340568;340569;340570;340571;340572;340573;340574;340575;340576;340577;340578;340579;340580;340581;340582;340583;340584;340585;340586;340587;340588;340589;340590;340591;340592;340593;340594;340595;340596;340597;340598;340599;340600;340601;340602;340603;340604;340605;340606 340572 41 TFTWLVGK Unmodified 950.52255 0.52255314 121 O00159 MYO1C Unconventional myosin-Ic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 78.209 78.318 2 0.020537 90481 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 62.717 39.788 43432000 0 0 0 0 2952600 3652900 3495800 3612100 2792300 5451000 4625800 7348900 0 3435700 6064700 51391 121 46136 431042;431043;431044;431045;431046;431047;431048;431049;431050;431051 340607;340608;340609;340610;340611;340612 340611 6 TFVAQMTVFDK Unmodified 1285.6377 0.63765925 2477 Q15022 SUZ12 Polycomb protein SUZ12 yes yes 0 0 0 By MS/MS 2 0 1 1 84.452 76.322 2 0.0077446 99727 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.883 65.658 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51392 2477 46137 431052 340613 340613 1 TFVDNIQTAFNTR Unmodified 1525.7525 0.75250609 3315 Q8N201 INTS1 Integrator complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 80.261 80.387 2 0.00056132 92909 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 91.855 76.315 34297000 0 0 0 0 0 4835300 3276800 3705100 4341000 5846200 0 7432100 4860200 0 0 51393 3315 46138 431053;431054;431055;431056;431057;431058;431059;431060;431061;431062 340614;340615;340616;340617;340618;340619;340620 340614 7 TFVEVDENGTQAAAATGAVVSER Unmodified 2321.1135 0.11353279 3945 Q96P63 SERPINB12 Serpin B12 yes yes 0 0 0 By MS/MS 10 0 1 1 72.979 73.164 3 0.012587 84250 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 23.34 0.90521 6835500 0 0 0 0 0 0 0 6835500 0 0 0 0 0 0 0 51394 3945 46139 431063 340621 340621 1 TFVLEVMGR Unmodified 1050.5532 0.55320134 2064;861;1063 P17858;P08237;Q01813 PFKL;PFKM;PFKP ATP-dependent 6-phosphofructokinase, liver type;ATP-dependent 6-phosphofructokinase, muscle type;ATP-dependent 6-phosphofructokinase, platelet type no no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.712 79.816 2 0.0034849 91770 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 103.74 62.237 52508000 0 0 0 0 2239000 3448900 2232500 5344600 2327800 6654500 3990400 5175100 3011600 5126500 12957000 51395 1063;861;2064 46140 431064;431065;431066;431067;431068;431069;431070;431071;431072;431073;431074 340622;340623;340624;340625;340626;340627;340628;340629 340625 8 TFVLEVMGR Oxidation (M) 1066.5481 0.54811597 2064;861;1063 P17858;P08237;Q01813 PFKL;PFKM;PFKP ATP-dependent 6-phosphofructokinase, liver type;ATP-dependent 6-phosphofructokinase, muscle type;ATP-dependent 6-phosphofructokinase, platelet type no no 0 1 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 64.739 64.949 2 0.038681 74502 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 40.067 22.082 24731000 0 0 0 0 0 4382100 0 5691100 0 6913200 0 0 0 0 7744700 51396 1063;861;2064 46140 431075;431076;431077;431078 340630 340630 1 TFVNITPAEVGVLVGK Unmodified 1642.9294 0.92940782 846 P07737 PFN1 Profilin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.53 3.98 2 9 2 17 5 5 3 1 1 1 2 1 1 2 2 1 1 2 2 93.506 92.515 2;3 3.4189E-50 114399 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 161.1 143.24 22538000000 9665400000 11961000000 481240000 1629700 3705900 4515500 5010500 6151200 4908700 23677000 69427000 26885000 2338500 35648000 246630000 51397 846 46141 431079;431080;431081;431082;431083;431084;431085;431086;431087;431088;431089;431090;431091;431092;431093;431094;431095;431096;431097;431098;431099;431100;431101;431102;431103;431104;431105;431106;431107;431108 340631;340632;340633;340634;340635;340636;340637;340638;340639;340640;340641;340642;340643;340644;340645;340646;340647;340648;340649;340650;340651;340652;340653;340654;340655;340656;340657;340658;340659;340660;340661;340662;340663;340664;340665;340666;340667;340668;340669;340670 340650 38 TFVPAMTAIHGPPITAPVVCTR Oxidation (M) 2351.213 0.21299302 3971 Q96RN5 MED15 Mediator of RNA polymerase II transcription subunit 15 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 80.396 80.456 3 1.6988E-08 93199 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.602 52.415 33383000 0 0 0 973640 0 5668500 1339800 0 0 0 4673400 10079000 3754700 0 6894700 51398 3971 46142 431109;431110;431111;431112;431113;431114;431115 340671;340672;340673;340674;340675;340676 340675 5455 6 TFVPQFQEAAFANGK Unmodified 1653.8151 0.81510635 4731 Q9NXR7 BRE BRCA1-A complex subunit BRE yes yes 0 0 0 By MS/MS 2 0 1 1 85.052 76.921 2 0.00069536 100378 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.799 50.975 17001000 17001000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51399 4731 46143 431116 340677 340677 1 TFVPQFQEAAFANGKL Unmodified 1766.8992 0.89917033 4731 Q9NXR7 BRE BRCA1-A complex subunit BRE yes yes 0 0 1 By MS/MS 2 0 1 1 92.692 84.562 2 3.4662E-05 109540 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 99.522 75.917 21742000 21742000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51400 4731 46144 431117 340678 340678 1 TFVSDLLPPTDK Unmodified 1331.6973 0.69728262 3100 Q7Z4Q2 HEATR3 HEAT repeat-containing protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.18 3.74 3 1 7 1 2 1 1 1 1 1 1 1 1 82.446 80.615 2 0.0014896 92574 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 81.338 56.415 396020000 8837400 324240000 6224800 7631500 0 0 0 8863200 0 0 10711000 11947000 8947800 8610500 0 51401 3100 46145 431118;431119;431120;431121;431122;431123;431124;431125;431126;431127;431128 340679;340680;340681;340682;340683;340684;340685 340684 7 TFVYNASEDRLELCVDAAGHFPIGPDVEDLVK Unmodified 3575.7242 0.72424902 3893 Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 yes yes 0 0 1 By MS/MS 3 0 1 1 96.456 92.952 4 0.017612 96133 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 20.452 18.503 3350000 3350000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51402 3893 46146 431129 340686 340686 1 TGAAEGLAK Unmodified 816.43413 0.43413207 4079 Q9BPX3 NCAPG Condensin complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 11.618 12.035 2 0.038908 10703 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 44.753 9.2594 14584000 0 0 0 0 0 0 0 0 0 0 6682100 7901800 0 0 0 51403 4079 46147 431130;431131 340687;340688 340688 2 TGAAGAEALSLLLK Unmodified 1313.7555 0.7554662 4823 Q9P2N6 KANSL3 KAT8 regulatory NSL complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.6 3.67 3 7 1 1 1 1 1 1 1 1 1 1 90.43 88.947 2 2.4702E-29 112391 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.75 117.88 76185000 18831000 24646000 4186400 0 2843100 0 0 3427700 0 4397100 4706000 0 2920900 3946300 6280400 51404 4823 46148 431132;431133;431134;431135;431136;431137;431138;431139;431140;431141 340689;340690;340691;340692;340693 340689 5 TGAAGERLK Unmodified 901.49813 0.49812931 4350 Q9H1H9 KIF13A Kinesin-like protein KIF13A yes yes 0 0 1 By MS/MS By MS/MS By matching 2 0 3 1 1 1 8.0138 4.976 2 0.038472 8638 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 118.74 77.441 251640000 177290000 30090000 44259000 0 0 0 0 0 0 0 0 0 0 0 0 51405 4350 46149 431142;431143;431144 340694;340695 340695 1 TGAAPIIDVVR Unmodified 1110.6397 0.63970816 1507 P46776 RPL27A 60S ribosomal protein L27a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.892 69.969 2 0.0029442 80136 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 101.97 72.813 2044900000 0 0 0 95990000 110960000 127100000 138910000 126300000 130260000 178330000 233680000 316010000 175820000 178540000 233020000 51406 1507 46150 431145;431146;431147;431148;431149;431150;431151;431152;431153;431154;431155;431156 340696;340697;340698;340699;340700;340701;340702;340703;340704;340705;340706 340704 3 TGAAPIIDVVRSGYYK Unmodified 1708.9148 0.91482039 1507 P46776 RPL27A 60S ribosomal protein L27a yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 82.191 75.77 3 0.0042504 99079 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.317 46.77 215650000 38352000 177300000 0 0 0 0 0 0 0 0 0 0 0 0 0 51407 1507 46151 431157;431158 340707 340707 1 TGADTTAAGPLFQQRPYPSPGAVLR Unmodified 2570.3241 0.32413469 435 O60828 PQBP1 Polyglutamine-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.738 79.842 3 2.5949E-41 91903 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 101.89 81.081 475820000 0 0 0 0 11802000 27932000 13643000 35815000 30135000 48313000 46762000 62358000 20397000 32406000 146260000 51408 435 46152 431159;431160;431161;431162;431163;431164;431165;431166;431167;431168;431169 340708;340709;340710;340711;340712;340713;340714;340715;340716;340717 340711 10 TGAEGAVLDEAK Unmodified 1159.5721 0.57208211 1328 P33176;O60282;Q12840 KIF5B;KIF5C;KIF5A Kinesin-1 heavy chain;Kinesin heavy chain isoform 5C;Kinesin heavy chain isoform 5A yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.48 1 2 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 41.576 41.016 2 3.1482E-23 39105 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 158.47 134.32 1329300000 62466000 422540000 0 57664000 51279000 60732000 55697000 61605000 45359000 73003000 81717000 95578000 75889000 71062000 114700000 51409 1328 46153 431170;431171;431172;431173;431174;431175;431176;431177;431178;431179;431180;431181;431182;431183;431184;431185 340718;340719;340720;340721;340722;340723;340724;340725;340726;340727;340728;340729;340730;340731;340732;340733;340734;340735;340736;340737 340731 18 TGAELVTCGSVLK Unmodified 1333.6912 0.69115139 4520 Q9HCN8 SDF2L1 Stromal cell-derived factor 2-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 64.353 59.545 2 0.0030389 76196 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.756 79.243 117800000 0 113770000 4027200 0 0 0 0 0 0 0 0 0 0 0 0 51410 4520 46154 431186;431187;431188 340738;340739;340740;340741 340738 4 TGAESISLLELCR Unmodified 1447.7341 0.73407884 382 O60216 RAD21 Double-strand-break repair protein rad21 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 81.25 81.253 2 2.5907E-09 94050 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 114.83 88.319 28473000 0 0 0 1891200 0 4780100 3920000 0 0 6127700 0 11754000 0 0 0 51411 382 46155 431189;431190;431191;431192;431193;431194 340742;340743;340744 340744 3 TGAHLELSLAK Unmodified 1138.6346 0.63462279 2033 Q00341 HDLBP Vigilin yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 51.608 52.06 3 0.014595 57651 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.684 30.519 12352000 0 0 0 0 0 0 0 0 0 0 0 0 0 3818500 8533800 51412 2033 46156 431195;431196 340745 340745 1 TGALLLQGFIQDR Unmodified 1430.7882 0.78816332 2140 Q07812 BAX Apoptosis regulator BAX yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 88.081 88.227 2 5.6302E-08 102323 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 101.93 74.625 53296000 0 0 0 0 0 7831400 2525900 2931600 2374800 8098400 3352600 4400800 0 4847900 16932000 51413 2140 46157 431197;431198;431199;431200;431201;431202;431203;431204;431205;431206;431207 340746;340747;340748;340749;340750;340751;340752;340753;340754;340755;340756;340757;340758 340747 13 TGAPAQADSR Unmodified 972.46247 0.46247208 1102 P20290 BTF3 Transcription factor BTF3 yes yes 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 6.7625 6.8819 2 0.042395 4562 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 39.305 20.574 21001000 0 0 0 1207300 1305600 1462100 1911200 1720700 0 2180700 3713700 1793600 1413900 1115000 3177200 51414 1102 46158 431208;431209;431210;431211;431212;431213;431214;431215;431216;431217;431218 340759 340759 1 TGAPCRSERLAK Unmodified 1344.6932 0.69321707 827;991 P06733;P09104;P13929 ENO1;ENO2;ENO3 Alpha-enolase;Gamma-enolase;Beta-enolase no no 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 13.643 9.9712 3 0.017465 15075 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.451 56.443 1232200000 1226300000 5871300 0 0 0 0 0 0 0 0 0 0 0 0 0 51415 827;991 46159 431219;431220 340760 340760 0 TGAPQYGSYGTAPVNLNIK Unmodified 1949.9847 0.98469087 2974 Q6UN15 FIP1L1 Pre-mRNA 3'-end-processing factor FIP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 75.347 75.037 2 1.3463E-83 86697 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 225.13 207.76 313930000 0 115240000 0 8758600 10794000 11120000 12800000 13053000 12051000 19665000 19872000 29678000 15279000 16061000 29559000 51416 2974 46160 431221;431222;431223;431224;431225;431226;431227;431228;431229;431230;431231;431232;431233 340761;340762;340763;340764;340765;340766;340767;340768;340769;340770;340771;340772;340773 340771 13 TGAQELLR Unmodified 886.48723 0.48723027 819 P06396 GSN Gelsolin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.267 35.449 2 0.0075386 39601 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 89.296 41.38 + 185040000 0 0 0 29036000 15805000 11147000 11100000 11709000 13646000 20490000 12705000 20358000 15400000 13852000 9788500 51417 819 46161 431234;431235;431236;431237;431238;431239;431240;431241;431242;431243;431244;431245 340774;340775;340776;340777 340777 3 TGAQGERLK Unmodified 958.51959 0.51959303 247 O15066 KIF3B Kinesin-like protein KIF3B;Kinesin-like protein KIF3B, N-terminally processed yes yes 0 0 1 By MS/MS By matching By matching 2 0 3 1 1 1 7.1514 4.1596 2 0.045739 7507 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.311 48.229 59074000 34014000 9883500 15177000 0 0 0 0 0 0 0 0 0 0 0 0 51418 247 46162 431246;431247;431248 340778 340778 0 TGASVLNK Unmodified 788.43922 0.43921744 3608 Q92499 DDX1 ATP-dependent RNA helicase DDX1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.42 3.66 3 1 8 1 2 1 1 1 1 1 1 1 1 1 15.96 14.892 2 0.0053121 17780 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 143.85 76.819 984180000 45663000 759850000 16569000 0 12663000 16302000 25262000 13315000 16265000 0 0 31609000 16088000 30596000 0 51419 3608 46163 431249;431250;431251;431252;431253;431254;431255;431256;431257;431258;431259;431260 340779;340780;340781;340782;340783;340784;340785;340786;340787 340782 7 TGASWTDNIMAQK Oxidation (M) 1437.6558 0.65582851 3116 Q7Z6K5 ARPIN Arpin yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 52.708 47.364 2 0.0042311 60888 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.334 50.103 43449000 0 43449000 0 0 0 0 0 0 0 0 0 0 0 0 0 51420 3116 46164 431261;431262 340788 340788 4720 1 TGASWTDNIMAQK Unmodified 1421.6609 0.66091389 3116 Q7Z6K5 ARPIN Arpin yes yes 0 0 0 By MS/MS 2 0 1 1 69.445 63.576 2 0.021709 80943 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 50.791 43.896 87711000 0 87711000 0 0 0 0 0 0 0 0 0 0 0 0 0 51421 3116 46164 431263 340789 340789 1 TGASYYGEQTLHYIATNGESAVVQLPK Unmodified 2896.4243 0.42430225 4242 Q9BY44 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 91.431 85.523 3;4 4.2645E-29 108461 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.339 81.971 50271000 26631000 21922000 1718100 0 0 0 0 0 0 0 0 0 0 0 0 51422 4242 46165 431264;431265;431266;431267 340790;340791;340792 340790 3 TGATGQRLK Unmodified 930.52468 0.52467841 5188 Q9Y496 KIF3A Kinesin-like protein KIF3A yes yes 0 0 1 By MS/MS 2 0 1 1 7.0225 3.5903 2 0.011292 6666 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 118.32 86.37 65360000 65360000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51423 5188 46166 431268 340793 340793 1 TGCELGDGPDTK Unmodified 1248.5292 0.52923102 502 O75459 PAGE1 P antigen family member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.34 1 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 26.95 26.866 2 8.8494E-08 25029 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.6 108.11 163830000 42104000 28298000 0 5263300 3795700 2802700 5929100 5458600 5037600 6360300 12406000 11842000 8173600 8183700 18175000 51424 502 46167 431269;431270;431271;431272;431273;431274;431275;431276;431277;431278;431279;431280;431281;431282;431283 340794;340795;340796;340797;340798;340799;340800;340801;340802;340803;340804;340805;340806;340807;340808 340798 15 TGCERGDGPDVQELGLPNPEEVK Unmodified 2495.1598 0.15983106 502 O75459 PAGE1 P antigen family member 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 75.465 74.678 3 7.5035E-15 92565 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.509 82.3 603370000 0 401770000 21768000 4761500 4728400 0 9720000 13687000 0 12453000 25050000 27041000 12679000 21932000 47781000 51425 502 46168 431284;431285;431286;431287;431288;431289;431290;431291;431292;431293;431294;431295;431296;431297 340809;340810;340811;340812;340813;340814;340815;340816;340817;340818;340819;340820;340821;340822;340823;340824;340825;340826;340827 340812 19 TGCNVLLIQK Unmodified 1144.6274 0.62742892 1642 P50991 CCT4 T-complex protein 1 subunit delta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 4 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 56.397 55.011 2 2.2151E-07 70921 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 153.08 135.1 1153400000 151820000 585390000 14578000 12991000 27150000 39063000 23215000 32500000 15581000 43939000 40376000 22464000 29315000 49283000 65697000 51426 1642 46169 431298;431299;431300;431301;431302;431303;431304;431305;431306;431307;431308;431309;431310;431311;431312;431313 340828;340829;340830;340831;340832;340833;340834;340835;340836;340837;340838;340839;340840;340841;340842;340843;340844;340845;340846;340847;340848 340834 20 TGDEEMLK Unmodified 921.41135 0.41134771 3811 Q96EI5 TCEAL4 Transcription elongation factor A protein-like 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 7 1 1 1 1 1 1 1 21.776 22.043 2 0.020846 22899 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 62.464 40.693 78846000 0 0 0 8199700 6580600 0 0 0 0 8177600 14103000 14345000 9104600 0 18336000 51427 3811 46170 431314;431315;431316;431317;431318;431319;431320 340849;340850;340851 340849 3 TGDEEMLK Oxidation (M) 937.40626 0.40626233 3811 Q96EI5 TCEAL4 Transcription elongation factor A protein-like 4 yes yes 0 1 0 By matching By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 9.686 9.835 2 0.00575 8331 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 85.212 67.364 23850000 0 0 0 1969400 1718700 1414700 0 1561300 1466700 1722500 947260 4166700 2724400 2239900 3918400 51428 3811 46170 431321;431322;431323;431324;431325;431326;431327;431328;431329;431330;431331 340852;340853 340853 5337 2 TGDESGALPVPQESIMENVDQAITK Unmodified 2628.2589 0.2588764 5048 Q9UPM8 AP4E1 AP-4 complex subunit epsilon-1 yes yes 0 0 0 By MS/MS 2 0 1 1 93.906 89.01 3 4.3104E-08 110485 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.152 54.99 27481000 0 27481000 0 0 0 0 0 0 0 0 0 0 0 0 0 51429 5048 46171 431332 340854 340854 1 TGDETELHSSEK Unmodified 1331.5841 0.58410336 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.04 2.6 3 22 1 1 1 1 2 2 2 2 2 2 1 2 2 2 2 9.0456 8.7849 2;3 1.8293E-05 6114 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 85.672 73.654 302770000 4643200 166240000 1391500 7219900 10852000 7107200 12870000 7803100 8154900 7661800 17673000 17760000 8057500 9640800 15693000 51430 3443 46172 431333;431334;431335;431336;431337;431338;431339;431340;431341;431342;431343;431344;431345;431346;431347;431348;431349;431350;431351;431352;431353;431354;431355;431356;431357 340855;340856;340857;340858;340859;340860 340857 4 TGDHTMDIPGCLLYTK Unmodified 1820.8437 0.84370564 4463 Q9H974 QTRTD1 Queuine tRNA-ribosyltransferase subunit QTRTD1 yes yes 0 0 0 By MS/MS 2 0 1 1 82.087 77.382 3 0.021775 96136 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 31.111 26.411 21956000 0 21956000 0 0 0 0 0 0 0 0 0 0 0 0 0 51431 4463 46173 431358 340861 340861 1 TGDLFAIK Unmodified 863.47527 0.4752686 4897 Q9UHD2 TBK1 Serine/threonine-protein kinase TBK1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 63.28 63.341 2 0.012232 72513 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 75.109 44.69 72682000 0 0 0 6945500 4245200 6818100 5675000 5291600 3653100 8669400 8512600 0 7312200 5184900 10374000 51432 4897 46174 431359;431360;431361;431362;431363;431364;431365;431366;431367;431368;431369 340862;340863;340864;340865;340866;340867;340868 340862 7 TGDLGDINAEQLPGR Unmodified 1554.7638 0.76379906 5085 Q9Y263 PLAA Phospholipase A-2-activating protein yes yes 0 0 0 By MS/MS 10 0 1 1 64.011 64.575 2 5.2242E-05 73200 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.632 49.34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51433 5085 46175 431370 340869 340869 1 TGDLGDINAEQLPGREHLNEPGTR Unmodified 2588.2579 0.25790562 5085 Q9Y263 PLAA Phospholipase A-2-activating protein yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 1 2 1 1 1 1 3 1 2 2 63.793 63.933 3;4 5.3408E-45 72433 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.67 101.21 191890000 0 0 0 4017200 4373100 26692000 6835100 0 6893500 16871000 13916000 30099000 11384000 16902000 53906000 51434 5085 46176 431371;431372;431373;431374;431375;431376;431377;431378;431379;431380;431381;431382;431383;431384;431385;431386 340870;340871;340872;340873;340874;340875;340876;340877;340878;340879;340880;340881;340882;340883;340884;340885 340875 15 TGDPQETLRR Unmodified 1171.5945 0.59454889 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 16.207 16.422 3 0.020172 15940 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.981 39.093 122170000 0 0 0 8289300 0 14078000 10499000 0 10083000 12217000 20205000 16201000 0 12253000 18344000 51435 2459 46177 431387;431388;431389;431390;431391;431392;431393;431394;431395 340886;340887;340888;340889 340889 0 TGDQQEETMPTK Oxidation (M) 1379.5875 0.58747418 413 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.2547 7.3813 2 3.6517E-05 5892 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 90.108 78.957 48946000 0 0 0 2738400 1558400 3115400 3988200 2238700 2792300 4826200 9491000 5674000 4265500 3310900 4947400 51436 413 46178 431396;431397;431398;431399;431400;431401;431402;431403;431404;431405;431406;431407 340890;340891;340892;340893;340894;340895;340896;340897;340898;340899;340900 340898 514 11 TGDQQEETMPTK Unmodified 1363.5926 0.59255956 413 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 17.724 17.941 2 2.2046E-05 17816 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 103.18 92.949 76537000 0 0 0 0 5266400 6930700 6337800 5638700 4302500 8390600 5819200 8252800 8464900 6691000 10442000 51437 413 46178 431408;431409;431410;431411;431412;431413;431414;431415;431416;431417;431418;431419 340901;340902;340903;340904;340905;340906;340907;340908;340909;340910;340911;340912 340909 11 TGDTGMLPANYVEAI Oxidation (M) 1566.7236 0.72357373 2452 Q14847 LASP1 LIM and SH3 domain protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 82.663 82.664 2 8.105E-21 95258 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 117.02 80.705 107460000 0 0 0 2335800 3072500 0 0 0 0 0 16732000 23437000 0 20030000 41857000 51438 2452 46179 431420;431421;431422;431423;431424;431425 340913;340914;340915;340916 340913 4032 4 TGDTGMLPANYVEAI Unmodified 1550.7287 0.72865911 2452 Q14847 LASP1 LIM and SH3 domain protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.18 2.59 1 10 1 1 1 1 1 1 1 1 1 1 1 90.309 90.494 2 0.0011073 103176 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 66.595 60.063 94369000 0 6449800 0 0 1085600 0 1261300 2342300 1107100 2331900 10348000 11439000 1229600 11292000 45483000 51439 2452 46179 431426;431427;431428;431429;431430;431431;431432;431433;431434;431435;431436 340917;340918;340919;340920;340921 340918 3 TGDVEDSTVLK Unmodified 1162.5717 0.57174776 5037 Q9UNN5 FAF1 FAS-associated factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 35.328 34.929 2 1.9825E-05 38159 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 129.38 91.571 349440000 19440000 0 0 22347000 13827000 47214000 19816000 15340000 21681000 42106000 35779000 29826000 0 28055000 54004000 51440 5037 46180 431437;431438;431439;431440;431441;431442;431443;431444;431445;431446;431447;431448;431449 340922;340923;340924;340925;340926;340927;340928;340929;340930;340931;340932;340933;340934;340935;340936;340937;340938;340939 340936 18 TGDVQTASYCMLQGSPLDVLK Unmodified 2282.0923 0.092268765 4723 Q9NXC5 MIOS WD repeat-containing protein mio yes yes 0 0 0 By MS/MS 2 0 1 1 56.167 48.019 5 0.020065 66300 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 14.015 5.415 17684000 17684000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51441 4723 46181 431450 340940 340940 1 TGEAIVDAALSALR Unmodified 1385.7514 0.75144346 2496 Q15084 PDIA6 Protein disulfide-isomerase A6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 92.357 92.485 2 0.00037856 107414 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 90.653 76.535 32084000 0 0 0 0 0 1491400 0 0 1582000 7538500 5013300 2658600 0 1545700 12254000 51442 2496 46182 431451;431452;431453;431454;431455;431456;431457 340941;340942;340943;340944;340945;340946;340947 340942 7 TGEDEDEEDNDALLK Unmodified 1691.701 0.70098361 3839 Q96FV9 THOC1 THO complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41.811 41.106 2 3.5579E-56 49731 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 168.3 151.63 223500000 13909000 20408000 0 12202000 8493600 12482000 11845000 11460000 11387000 18008000 17693000 25855000 19065000 14547000 26141000 51443 3839 46183 431458;431459;431460;431461;431462;431463;431464;431465;431466;431467;431468;431469;431470;431471 340948;340949;340950;340951;340952;340953;340954;340955;340956;340957;340958;340959;340960;340961 340951 14 TGEDGSNLDDAK Unmodified 1220.5157 0.51568944 4499 Q9HB96 FANCE Fanconi anemia group E protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.136 13.292 2 0.00099432 12718 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 87.568 78.705 36629000 0 0 0 1687900 2385600 2328100 2976500 2145500 2071400 4449700 3570500 4352000 3849200 3647600 3165400 51444 4499 46184 431472;431473;431474;431475;431476;431477;431478;431479;431480;431481;431482;431483 340962;340963;340964;340965;340966;340967;340968;340969;340970;340971;340972 340971 10 TGEEDEEEFFCNR Unmodified 1660.6311 0.63112991 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 57.651 57.991 2 1.0177E-12 65728 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 131.28 125.31 59650000 0 0 0 0 0 0 0 0 0 24450000 0 9652000 8851700 6039800 10657000 51445 1601 46185 431484;431485;431486;431487;431488;431489;431490;431491 340973;340974;340975;340976;340977;340978;340979;340980 340979 8 TGEEDEEEFFCNRAK Unmodified 1859.7632 0.76320671 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 1 By MS/MS 2 0 1 1 58.503 50.298 3 0.0043995 68401 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.276 54.276 12122000 12122000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51446 1601 46186 431492 340981 340981 1 TGEEIFGTIGMRPNAK Oxidation (M) 1735.8563 0.85631924 4069 Q99873 PRMT1 Protein arginine N-methyltransferase 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 5.56 3.98 5 4 2 1 2 1 1 1 1 64.533 61.352 2;3 3.5625E-64 82626 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 188.06 176.53 335220000 186780000 49432000 69480000 0 0 0 0 0 0 0 4574700 0 10697000 3505000 10755000 51447 4069 46187 431493;431494;431495;431496;431497;431498;431499;431500;431501 340982;340983;340984;340985;340986;340987 340984 5575 5 TGEEIFGTIGMRPNAK Unmodified 1719.8614 0.86140461 4069 Q99873 PRMT1 Protein arginine N-methyltransferase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.4 3.77 4 2 4 3 2 1 1 1 2 74.79 71.792 2;3 2.0577E-38 93023 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 174.24 142.4 516610000 281350000 76276000 21300000 0 0 0 0 0 0 0 6130200 0 0 5070100 126480000 51448 4069 46187 431502;431503;431504;431505;431506;431507;431508;431509;431510;431511 340988;340989;340990;340991;340992;340993;340994;340995;340996 340994 8 TGEEILPAYLSR Unmodified 1347.7034 0.70343063 3187 Q86X10 RALGAPB Ral GTPase-activating protein subunit beta yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 76.528 76.602 2 0.005898 88596 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 52.79 27.404 23229000 0 0 0 0 1590700 4457500 2085900 3086700 0 3488200 3668200 4852100 0 0 0 51449 3187 46188 431512;431513;431514;431515;431516;431517;431518 340997;340998;340999 340999 3 TGEEINFGK Unmodified 993.47673 0.47672516 1614 P49959 MRE11A Double-strand break repair protein MRE11A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 39.784 38.092 2 0.00012054 48688 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 152.41 117.06 885470000 20530000 535600000 1861100 0 0 48193000 53483000 35605000 42835000 41138000 0 0 60828000 0 45400000 51450 1614 46189 431519;431520;431521;431522;431523;431524;431525;431526;431527;431528;431529;431530;431531;431532 341000;341001;341002;341003;341004;341005;341006;341007;341008;341009;341010;341011 341003 12 TGEEVGFVVDAK Unmodified 1249.619 0.6190323 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.12 3.72 2 1 5 2 1 1 1 1 1 1 61.284 59.601 2 2.2969E-05 67704 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 102.53 62.909 296180000 0 264560000 1862800 2211200 0 0 0 0 0 0 6331100 7711300 0 2871100 10631000 51451 487 46190 431533;431534;431535;431536;431537;431538;431539;431540 341012;341013;341014;341015;341016;341017;341018 341013 7 TGEGAVSLMER Unmodified 1148.5496 0.54957253 4945 Q9UJX4 ANAPC5 Anaphase-promoting complex subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 2 1 1 1 1 1 1 48.179 48.351 2 0.0022598 53260 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.525 38.208 92368000 0 0 0 7791700 6658900 0 5113600 8030100 2892100 10637000 10026000 8144300 11625000 7097200 14351000 51452 4945 46191 431541;431542;431543;431544;431545;431546;431547;431548;431549;431550;431551;431552 341019;341020;341021;341022;341023;341024;341025;341026 341020 8 TGEILSESSMENDDEATEVTDEPMEQD Unmodified 3000.186 0.18596655 4736 Q9NY27 PPP4R2 Serine/threonine-protein phosphatase 4 regulatory subunit 2 yes yes 0 0 0 By MS/MS 1 0 1 1 101.15 106.42 3 0.034347 85921 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 18.101 18.06 4080100 4080100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51453 4736 46192 431553 341027 341027 1 TGEITASSNK Unmodified 1006.4931 0.49310351 3476 Q8TAT6 NPLOC4 Nuclear protein localization protein 4 homolog yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 9.1904 5.6756 2 0.02713 9644 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.102 33.213 48478000 20017000 28462000 0 0 0 0 0 0 0 0 0 0 0 0 0 51454 3476 46193 431554;431555 341028;341029 341029 2 TGELNQLLNAVK Unmodified 1298.7194 0.71941505 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 83.124 82.774 2 3.0963E-14 103650 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 133.83 111.98 165640000 0 21592000 0 1411300 5189700 8834400 7316100 12612000 12059000 17594000 13145000 11859000 11570000 0 42456000 51455 2556 46194 431556;431557;431558;431559;431560;431561;431562;431563;431564;431565;431566;431567 341030;341031;341032;341033;341034;341035;341036;341037;341038;341039;341040 341033 8 TGENFRLIYDTK Unmodified 1455.7358 0.73579339 1905 P62701 RPS4X 40S ribosomal protein S4, X isoform yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 2 2 2 2 68.969 62.993 3 0.00088386 84044 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.479 46.714 639940000 574310000 65636000 0 0 0 0 0 0 0 0 0 0 0 0 0 51456 1905 46195 431568;431569;431570;431571 341041;341042;341043 341042 3 TGENVEDAFLEAAK Unmodified 1492.7046 0.70455285 1834 P61106 RAB14 Ras-related protein Rab-14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.14 3.87 5 2 7 3 3 1 1 1 1 1 1 1 1 79.194 77.332 2;3 2.4239E-29 95306 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 139.31 117.56 2098900000 38688000 1181000000 8973100 0 0 0 103940000 0 0 140840000 134160000 144950000 105140000 98787000 142500000 51457 1834 46196 431572;431573;431574;431575;431576;431577;431578;431579;431580;431581;431582;431583;431584;431585 341044;341045;341046;341047;341048;341049;341050;341051;341052;341053;341054;341055;341056;341057;341058;341059 341046 13 TGENVEDAFLEAAKK Unmodified 1620.7995 0.79951586 1834 P61106 RAB14 Ras-related protein Rab-14 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 72.542 72.61 3 9.2109E-07 83627 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 83.929 76.385 112260000 0 0 0 12060000 9050000 0 11093000 14432000 0 12737000 11773000 16947000 7192600 8357800 8616100 51458 1834 46197 431586;431587;431588;431589;431590;431591;431592;431593;431594;431595 341060;341061;341062;341063;341064;341065;341066;341067;341068;341069 341063 8 TGEPCVAELTEENFQR Unmodified 1878.8418 0.84179138 3217 Q8IUD2 ERC1 ELKS/Rab6-interacting/CAST family member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 74.289 74.338 2 3.5995E-05 85284 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 102.97 102.97 83278000 0 0 0 3328600 4510000 5303100 4301400 0 3969500 11121000 10317000 11039000 6782200 6444400 16162000 51459 3217 46198 431596;431597;431598;431599;431600;431601;431602;431603;431604;431605;431606 341070;341071;341072;341073;341074;341075;341076;341077;341078;341079;341080;341081 341073 12 TGESLCYAFIEFEK Unmodified 1692.7705 0.77052392 3537 Q8WUA2 PPIL4 Peptidyl-prolyl cis-trans isomerase-like 4 yes yes 0 0 0 By MS/MS 2 0 1 1 93.233 85.103 2 0.0014825 110272 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.685 54.721 6970900 6970900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51460 3537 46199 431607 341082 341082 1 TGESQNQLAVDQIAFQK Unmodified 1875.9327 0.9326553 4236 Q9BXW9 FANCD2 Fanconi anemia group D2 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 72.568 72.261 2 7.8131E-54 89345 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 149.96 129.83 164600000 0 69441000 0 5063400 3961500 7225800 5640500 11276000 3739200 9533100 7599700 11042000 8032700 7559400 14487000 51461 4236 46200 431608;431609;431610;431611;431612;431613;431614;431615;431616;431617;431618;431619;431620 341083;341084 341083 2 TGESTVLSSIPLPSDDFK Unmodified 1891.9415 0.94148865 4538 Q9NP74 PALMD Palmdelphin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 3 1 1 1 1 1 1 1 1 1 1 1 89.586 88.47 2;3 6.2022E-10 109458 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 139.48 125.32 522320000 0 478060000 818040 0 1093000 2441900 1662300 2930500 2673400 6444000 5520500 7230100 0 0 13440000 51462 4538 46201 431621;431622;431623;431624;431625;431626;431627;431628;431629;431630;431631;431632;431633;431634 341085;341086;341087;341088;341089;341090;341091;341092;341093;341094;341095 341087 10 TGESVQSRELSVSGK Unmodified 1562.79 0.79001381 2955 Q6PIJ6 FBXO38 F-box only protein 38 yes yes 0 0 1 By MS/MS 2 0 1 1 32.581 29.31 3 0.037122 37254 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 20.828 0.40085 5810600 0 0 5810600 0 0 0 0 0 0 0 0 0 0 0 0 51463 2955 46202 431635 341096 341096 1 TGETFVK Unmodified 780.40177 0.4017693 2386 Q14185 DOCK1 Dedicator of cytokinesis protein 1 yes yes 0 0 0 By MS/MS By matching 2 0 3 2 1 22.32 20.005 2 0.040529 26540 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.462 26.753 37995000 0 36107000 1888300 0 0 0 0 0 0 0 0 0 0 0 0 51464 2386 46203 431636;431637;431638 341097 341097 1 TGETMIQWSQFK Unmodified 1454.6864 0.68640036 4736 Q9NY27 PPP4R2 Serine/threonine-protein phosphatase 4 regulatory subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 80.732 78.398 2 0.0067372 97353 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.095 82.86 53530000 0 46982000 1969600 0 0 0 0 0 0 0 0 0 0 0 4578400 51465 4736 46204 431639;431640;431641 341098;341099 341098 1 TGETQSLFK Unmodified 1009.508 0.50802529 3121 Q7Z7C8 TAF8 Transcription initiation factor TFIID subunit 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 38.656 38.837 2 0.016214 43501 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 56.729 35.281 37088000 0 0 0 0 3131600 5958800 4461300 0 0 4990700 4177100 0 0 4387900 9980700 51466 3121 46205 431642;431643;431644;431645;431646;431647;431648 341100;341101;341102 341100 3 TGETSRALSSSK Unmodified 1222.6153 0.61534391 1730 P53999 SUB1 Activated RNA polymerase II transcriptional coactivator p15 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.22 0.416 7 2 3 4 2 9.4023 7.2168 2;3 7.4509E-06 10335 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.71 92.986 3466800000 2362000000 245940000 858800000 0 0 0 0 0 0 0 0 0 0 0 0 51467 1730 46206 431649;431650;431651;431652;431653;431654;431655;431656;431657 341103;341104;341105;341106 341103 1 TGETVVEEMIATRK Unmodified 1562.7974 0.79740737 3631 Q92576 PHF3 PHD finger protein 3 yes yes 0 0 1 By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.856 71.925 3 0.0087366 83148 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 33.008 27.93 92155000 0 0 0 4361100 3196300 6878100 5051900 6880900 6257600 9254300 7010900 9221400 6734100 8772100 18537000 51468 3631 46207 431658;431659;431660;431661;431662;431663;431664;431665;431666;431667;431668;431669 341107;341108;341109;341110;341111;341112 341112 5 TGEVLHEVSNGSVVHR Unmodified 1718.87 0.86999547 2390 Q14202 ZMYM3 Zinc finger MYM-type protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 40.245 40.311 3 2.4314E-06 44741 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 81.651 64.573 51627000 0 0 0 3679300 5497600 7155800 0 4298100 0 9099400 0 0 8082800 0 13814000 51469 2390 46208 431670;431671;431672;431673;431674;431675;431676;431677 341113;341114;341115;341116;341117;341118;341119;341120 341114 7 TGEYPVPLIR Unmodified 1143.6288 0.62880913 944 P11310 ACADM Medium-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 0 0 0 By MS/MS 10 0 1 1 72.96 73.33 2 0.040924 83943 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.776 36.337 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51470 944 46209 431678 341121 341121 1 TGFCHLYK Unmodified 1024.48 0.4800364 3136 Q86TI2 DPP9 Dipeptidyl peptidase 9 yes yes 0 0 0 By MS/MS 2 0 1 1 43.213 36.42 2 0.023523 49986 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.305 30.006 28684000 28684000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51471 3136 46210 431679 341122 341122 1 TGFFEFQAAK Unmodified 1144.5553 0.55530983 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 76.907 75.778 2 0.00093683 86853 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 111.82 89.86 2268400000 1355100000 427910000 163470000 10189000 12195000 30933000 21033000 19433000 16846000 36467000 31759000 28242000 19558000 21493000 73842000 51472 4819 46211 431680;431681;431682;431683;431684;431685;431686;431687;431688;431689;431690;431691;431692;431693;431694;431695 341123;341124;341125;341126;341127;341128;341129;341130;341131;341132;341133;341134;341135;341136;341137;341138;341139 341127 17 TGFINLDK Unmodified 906.48108 0.48108226 436 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 56.22 56.343 2 0.037979 63113 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 51.193 25.743 88101000 0 0 0 0 5796200 12939000 6832700 0 10828000 11014000 0 15794000 13819000 11078000 0 51473 436 46212 431696;431697;431698;431699;431700;431701;431702;431703 341140;341141;341142 341142 3 TGFNMDDLQK Unmodified 1167.523 0.52302343 3087 Q7Z3U7 MON2 Protein MON2 homolog yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 62.693 57.355 2 1.1175E-05 73414 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 135.71 109.61 135320000 0 135320000 0 0 0 0 0 0 0 0 0 0 0 0 0 51474 3087 46213 431704;431705 341143;341144 341144 2 TGFQAVTGK Unmodified 907.47633 0.47633123 1099 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 30.378 29.498 2 0.0087066 32188 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 68.846 39.508 1990800000 187740000 1538900000 0 15509000 12967000 15584000 18490000 15369000 16482000 24619000 26721000 31275000 21180000 20418000 45524000 51475 1099 46214 431706;431707;431708;431709;431710;431711;431712;431713;431714;431715;431716;431717;431718;431719;431720 341145;341146;341147;341148 341145 1 TGFSTSPESPYTHWK Unmodified 1723.7842 0.78420015 4069 Q99873 PRMT1 Protein arginine N-methyltransferase 1 yes yes 0 0 0 By MS/MS 10 0 1 1 58.821 59.414 2 1.0257E-05 66943 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.961 80.429 9225200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9225200 51476 4069 46215 431721 341149 341149 1 TGFVDETEAAK Unmodified 1166.5455 0.54553301 4627 Q9NSG2 C1orf112 Uncharacterized protein C1orf112 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.815 35.996 2 0.00063867 39958 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 78.655 57.192 71755000 0 0 0 4463100 5035400 8712600 5978200 3854600 5087300 5496600 5638500 9668100 5435600 6442600 5942000 51477 4627 46216 431722;431723;431724;431725;431726;431727;431728;431729;431730;431731;431732;431733 341150;341151;341152;341153;341154;341155;341156;341157;341158;341159;341160;341161;341162 341150 13 TGFVPSNYVERK Unmodified 1395.7147 0.71466402 1035 P16333 NCK1 Cytoplasmic protein NCK1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 51.561 50.246 3 0.0007253 55223 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.726 37.373 255210000 126040000 26028000 1241700 7086400 6121800 8636100 8464300 7532600 10858000 10466000 15927000 0 0 8969100 17842000 51478 1035 46217 431734;431735;431736;431737;431738;431739;431740;431741;431742;431743;431744;431745;431746 341163;341164;341165;341166;341167;341168;341169;341170;341171;341172;341173;341174;341175;341176 341167 14 TGGADQSLQQGEGSK Unmodified 1461.6696 0.66956432 878 P09132 SRP19 Signal recognition particle 19 kDa protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13.933 13.54 2 3.5102E-49 12590 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 203.51 191.3 344010000 9741000 11761000 0 17377000 19973000 21010000 21605000 27063000 14272000 30428000 31847000 37706000 34574000 26315000 40341000 51479 878 46218 431747;431748;431749;431750;431751;431752;431753;431754;431755;431756;431757;431758;431759;431760 341177;341178;341179;341180;341181;341182;341183;341184;341185;341186;341187;341188;341189 341180 13 TGGADQSLQQGEGSKK Unmodified 1589.7645 0.76452734 878 P09132 SRP19 Signal recognition particle 19 kDa protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 9.3955 9.4846 3 0.00014703 7790 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 45.438 35.062 42744000 0 0 0 8172800 4574600 3041000 0 5636400 1662500 0 0 9808700 6218400 3629600 0 51480 878 46219 431761;431762;431763;431764;431765;431766;431767;431768;431769 341190;341191;341192;341193;341194;341195;341196 341194 7 TGGAYGEDLGADYNLSQVCDGK Unmodified 2288.9856 0.98555509 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.57 3.6 1 6 4 24 4 7 2 2 2 2 2 2 2 2 2 2 2 2 75.099 73.719 2;3 0 89216 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 367.33 362.44 4312500000 91441000 3167000000 0 22687000 44433000 189330000 38764000 42020000 31892000 119170000 105450000 102700000 46626000 104240000 206820000 51481 1565 46220 431770;431771;431772;431773;431774;431775;431776;431777;431778;431779;431780;431781;431782;431783;431784;431785;431786;431787;431788;431789;431790;431791;431792;431793;431794;431795;431796;431797;431798;431799;431800;431801;431802;431803;431804 341197;341198;341199;341200;341201;341202;341203;341204;341205;341206;341207;341208;341209;341210;341211;341212;341213;341214;341215;341216;341217;341218;341219 341202 22 TGGEHVYFAK Unmodified 1107.5349 0.53490874 3839 Q96FV9 THOC1 THO complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 34.415 28.92 2 0.0017161 36077 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 119.07 69.709 57891000 36547000 21344000 0 0 0 0 0 0 0 0 0 0 0 0 0 51482 3839 46221 431805;431806;431807 341220;341221 341221 2 TGGETASRYAIK Unmodified 1252.6412 0.64116473 4447 Q9H892 TTC12 Tetratricopeptide repeat protein 12 yes yes 0 0 1 By MS/MS 2 0 1 1 28.084 22.565 2 0.033021 31930 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.499 35.413 4683800 4683800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51483 4447 46222 431808 341222 341222 1 TGGFGAAPVFGSPPTFGGSPGFGGVPAFGSAPAFTSPLGSTGGK Unmodified 3954.9217 0.92170327 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 0 By MS/MS 2 0 1 1 99.621 91.49 3 3.468E-06 117939 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 27.704 23.552 12101000 12101000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51484 1364 46223 431809 341223 341223 1 TGGPSPAGPAAAR Unmodified 1108.5625 0.56252048 1982 P78411 IRX5 Iroquois-class homeodomain protein IRX-5 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 17.685 17.873 2 0.0040459 18283 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 51.268 32.025 97049000 0 0 0 7211500 7461300 7194300 7700100 6458100 6430800 7852200 5597800 13707000 9462800 8614100 9359100 51485 1982 46224 431810;431811;431812;431813;431814;431815;431816;431817;431818;431819;431820;431821 341224;341225;341226;341227 341227 4 TGGRAPPGGAEAGEPTTLLQR Unmodified 2035.0447 0.044665367 1536 P48382 RFX5 DNA-binding protein RFX5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 2 1 1 52.28 52.435 3 1.8316E-06 59890 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 63.726 47.961 227030000 0 0 0 15884000 21082000 9762400 27896000 27320000 12834000 23099000 19767000 18245000 22807000 11962000 16369000 51486 1536 46225 431822;431823;431824;431825;431826;431827;431828;431829;431830;431831;431832;431833;431834 341228;341229;341230;341231;341232;341233;341234;341235;341236;341237;341238;341239;341240;341241;341242;341243 341241 15 TGGRVYGTTGTK Unmodified 1196.6149 0.61494998 2974 Q6UN15 FIP1L1 Pre-mRNA 3'-end-processing factor FIP1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 11.116 8.0235 3 0.00281 12360 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.313 46.946 64563000 62716000 0 1846900 0 0 0 0 0 0 0 0 0 0 0 0 51487 2974 46226 431835;431836 341244 341244 1 TGGTLSDPEVQR Unmodified 1258.6153 0.61534391 3516 Q8TEH3 DENND1A DENN domain-containing protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.737 30.927 2 2.4838E-05 33668 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 110.53 95.867 212030000 0 0 0 11453000 12996000 15048000 15568000 15651000 14170000 18137000 19005000 31271000 20227000 18709000 19799000 51488 3516 46227 431837;431838;431839;431840;431841;431842;431843;431844;431845;431846;431847;431848 341245;341246;341247;341248;341249;341250;341251;341252;341253;341254;341255;341256;341257;341258 341246 14 TGGTQTDLFTCGK Unmodified 1384.6293 0.62927941 1149 P23193;Q15560 TCEA1;TCEA2 Transcription elongation factor A protein 1;Transcription elongation factor A protein 2 yes no 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 51.214 44.353 2 5.1793E-13 58556 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.54 106.95 113350000 5581400 107760000 0 0 0 0 0 0 0 0 0 0 0 0 0 51489 1149 46228 431849;431850 341259;341260;341261;341262 341261 4 TGHIAAGTSTNGIK Unmodified 1326.6892 0.68917755 1115 P20933 AGA N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase;Glycosylasparaginase alpha chain;Glycosylasparaginase beta chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 23.269 19.325 2;3 2.8375E-29 27283 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 134.38 110.23 32568000 10632000 20498000 1438400 0 0 0 0 0 0 0 0 0 0 0 0 51490 1115 46229 431851;431852;431853 341263;341264;341265 341264 3 TGHIRPAVGLR Unmodified 1175.6887 0.68872404 2867 Q6BDS2 UHRF1BP1 UHRF1-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.51 27.707 3 0.00039892 29872 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 63.624 49.855 294870000 0 0 0 6498100 5527200 27703000 12538000 27114000 17682000 21001000 32434000 33533000 51054000 34547000 25242000 51491 2867 46230 431854;431855;431856;431857;431858;431859;431860;431861;431862;431863;431864;431865 341266;341267;341268;341269;341270;341271;341272;341273;341274;341275 341274 8 TGHNLQVK Unmodified 895.48756 0.48756462 2820 Q5VVJ2 MYSM1 Histone H2A deubiquitinase MYSM1 yes yes 0 0 0 By MS/MS By matching By MS/MS 2 0 3 1 1 1 11.22 8.0649 2 0.032096 12564 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.486 42.016 35931000 23208000 7904300 4818300 0 0 0 0 0 0 0 0 0 0 0 0 51492 2820 46231 431866;431867;431868 341276 341276 1 TGHSGTLDPK Unmodified 1011.4985 0.49852324 436 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 9.3149 5.8002 2 5.3104E-05 8267 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 133.98 100.18 41089000 5345900 35743000 0 0 0 0 0 0 0 0 0 0 0 0 0 51493 436 46232 431869;431870 341277 341277 0 TGHVIAVK Unmodified 823.49159 0.49158736 206 O14733 MAP2K7 Dual specificity mitogen-activated protein kinase kinase 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 14.751 14.406 2 0.017927 18878 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 89.55 55.811 78001000 0 23468000 10078000 0 2939500 3077500 3513000 3058300 2498500 5152900 6014100 5725500 4869800 0 7605600 51494 206 46233 431871;431872;431873;431874;431875;431876;431877;431878;431879;431880;431881;431882 341278;341279;341280;341281;341282 341279 5 TGHYLTVK Unmodified 917.49707 0.49706667 295 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes yes 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 20.567 20.839 2 0.012862 21500 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 73.665 25.103 77531000 0 0 0 0 2432600 0 3310500 0 2700400 6621400 10446000 19416000 6520000 7904900 18180000 51495 295 46234 431883;431884;431885;431886;431887;431888;431889;431890;431891 341283 341283 1 TGIANTLGNK Unmodified 987.53491 0.53490874 276 O15357;Q92835 INPPL1;INPP5D Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2;Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.08 3.33 2 1 9 1 1 1 1 1 1 1 1 1 1 1 1 30.753 29.478 2 0.0013675 31969 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 107.15 46.564 132810000 37042000 6958200 1498700 7136300 7358200 10953000 12944000 11343000 6779700 16204000 0 0 0 14593000 0 51496 276 46235 431892;431893;431894;431895;431896;431897;431898;431899;431900;431901;431902;431903 341284;341285;341286;341287;341288;341289;341290;341291;341292;341293;341294;341295;341296;341297 341288 14 TGIAQLVK Unmodified 828.5069 0.50690308 4821 Q9P2K8 EIF2AK4 Eukaryotic translation initiation factor 2-alpha kinase 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 56.211 50.231 2 0.011776 65464 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.24 57.272 42891000 11681000 29155000 2054100 0 0 0 0 0 0 0 0 0 0 0 0 51497 4821 46236 431904;431905;431906 341298 341298 1 TGIDLGTTGR Unmodified 989.51417 0.5141733 2410 Q14498 RBM39 RNA-binding protein 39 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.623 39.802 2 2.2316E-24 44187 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 177.7 112.45 578310000 0 0 0 31184000 28749000 45394000 42734000 30019000 28290000 60913000 57726000 65693000 53592000 53603000 80417000 51498 2410 46237 431907;431908;431909;431910;431911;431912;431913;431914;431915;431916;431917;431918 341299;341300;341301;341302;341303;341304;341305;341306;341307;341308;341309;341310;341311 341300 11 TGIDQLVVTPISQAQAK Unmodified 1767.9731 0.97306355 2414 Q14562 DHX8 ATP-dependent RNA helicase DHX8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 80.954 80.433 2 5.8948E-09 99214 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.11 80.576 195910000 0 128750000 0 3515400 4454200 5906500 4736900 4925800 5159200 9700700 7922200 6020400 4721000 5251600 4850700 51499 2414 46238 431919;431920;431921;431922;431923;431924;431925;431926;431927;431928;431929;431930;431931;431932 341312;341313;341314;341315;341316;341317;341318;341319;341320;341321;341322;341323;341324;341325 341315 13 TGIEQGSDAGYLCESQK Unmodified 1841.8102 0.8101569 1426 P40939 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 47.858 47.422 2 9.9648E-27 53452 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 111.39 97.23 47642000 0 19195000 0 0 1959200 4737000 2170700 2492000 2068000 3533300 0 6326900 2421200 2739400 0 51500 1426 46239 431933;431934;431935;431936;431937;431938;431939;431940;431941;431942;431943 341326;341327;341328;341329;341330 341329 5 TGIPLNVLPK Unmodified 1050.6437 0.64373091 3850 Q96GA3 LTV1 Protein LTV1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.55 78.608 2 0.010707 90820 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 55.531 21.888 101200000 0 0 0 3378400 4788000 5918200 6746300 4655600 5301000 7542300 11300000 14524000 10018000 10292000 16732000 51501 3850 46240 431944;431945;431946;431947;431948;431949;431950;431951;431952;431953;431954;431955 341331;341332;341333;341334;341335;341336;341337;341338;341339 341335 9 TGIPTLPSTFYSHTEK Unmodified 1777.8887 0.88866522 3492 Q8TCU4 ALMS1 Alstrom syndrome protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 82.319 74.188 3 0.04218 97134 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 25.794 18.386 7985200 7985200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51502 3492 46241 431956 341340 341340 1 TGIQVLLK Unmodified 870.55385 0.55385327 465 O75153 CLUH Clustered mitochondria protein homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67.811 66.55 2 0.012113 83240 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 101.28 25.25 1110000000 623030000 365050000 36479000 2541300 3006400 6595100 3987500 3989000 3556800 6360000 8397500 10395000 4043000 10598000 21965000 51503 465 46242 431957;431958;431959;431960;431961;431962;431963;431964;431965;431966;431967;431968;431969;431970;431971;431972 341341;341342;341343;341344;341345;341346;341347;341348;341349;341350;341351;341352;341353;341354 341352 14 TGIRDVHLELK Unmodified 1279.7248 0.72483478 3511 Q8TE04 PANK1 Pantothenate kinase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 52.104 52.321 3 0.0052469 59011 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 42.425 33.429 52114000 0 0 0 0 0 34098000 0 0 0 10354000 7662100 0 0 0 0 51504 3511 46243 431973;431974;431975 341355;341356;341357 341355 3 TGISDVFAK Unmodified 936.49165 0.49164694 1085 P19338 NCL Nucleolin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 60.443 59.107 2 0.0073568 75730 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.162 39.996 3797100000 148330000 2269200000 66514000 88316000 75881000 62905000 105940000 102240000 82066000 92095000 155800000 122410000 138140000 129610000 157620000 51505 1085 46244 431976;431977;431978;431979;431980;431981;431982;431983;431984;431985;431986;431987;431988;431989;431990;431991 341358;341359;341360;341361;341362;341363;341364;341365;341366;341367;341368;341369;341370;341371 341361 12 TGISEEAAIEENK Unmodified 1389.6624 0.66235368 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 42.599 41.907 2 5.831E-21 52492 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 163.9 141.26 241210000 0 70161000 0 10850000 10116000 13348000 0 0 15123000 25853000 19960000 17375000 14512000 18870000 25040000 51506 2804 46245 431992;431993;431994;431995;431996;431997;431998;431999;432000;432001;432002;432003;432004;432005;432006 341372;341373;341374;341375;341376;341377;341378;341379;341380;341381;341382;341383;341384 341375 13 TGIYEEK Unmodified 838.40725 0.40724861 1227 P27824 CANX Calnexin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.51 16.689 2 0.015833 15256 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 117.16 65.588 506710000 0 0 0 29539000 35840000 33721000 42190000 35553000 31321000 42685000 58633000 50500000 49864000 53627000 43241000 51507 1227 46246 432007;432008;432009;432010;432011;432012;432013;432014;432015;432016;432017;432018 341385;341386;341387;341388;341389;341390;341391;341392 341386 6 TGIYSSTSCHK Unmodified 1239.5554 0.55538619 893 P09668 CTSH Pro-cathepsin H;Cathepsin H mini chain;Cathepsin H;Cathepsin H heavy chain;Cathepsin H light chain yes yes 0 0 0 By MS/MS 10 0 1 1 12.415 12.279 3 0.018781 11339 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 29.805 18.641 7706000 0 0 0 7706000 0 0 0 0 0 0 0 0 0 0 0 51508 893 46247 432019 341393 341393 1 TGKPEEASLDSREK Unmodified 1545.7635 0.76346471 4240 Q9BY42 RTFDC1 Protein RTF2 homolog yes yes 0 0 2 By MS/MS By MS/MS By MS/MS 2 0 6 2 2 2 16.01 12.701 3;4 9.2466E-29 16278 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 133.48 117.54 187650000 27549000 28450000 131650000 0 0 0 0 0 0 0 0 0 0 0 0 51509 4240 46248 432020;432021;432022;432023;432024;432025 341394;341395;341396;341397;341398 341397 3 TGLAVLELQNK Unmodified 1184.6765 0.6764876 17 A3KN83 SBNO1 Protein strawberry notch homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 74.744 73.469 2 1.055E-06 92560 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.86 84.317 307350000 77250000 54708000 25662000 0 14578000 15045000 13308000 11177000 0 16236000 14239000 17058000 11562000 13253000 23269000 51510 17 46249 432026;432027;432028;432029;432030;432031;432032;432033;432034;432035;432036;432037;432038;432039;432040 341399;341400;341401;341402;341403;341404;341405;341406;341407;341408;341409;341410;341411;341412;341413;341414;341415;341416 341403 18 TGLAVTVGQAK Unmodified 1043.5975 0.597509 2289 Q13428 TCOF1 Treacle protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 43.131 42.919 2 5.2099E-09 46750 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 135.86 107.38 534120000 0 32558000 0 34824000 31550000 21165000 36481000 31876000 18743000 32423000 63124000 57390000 55398000 50948000 67637000 51511 2289 46250 432041;432042;432043;432044;432045;432046;432047;432048;432049;432050;432051;432052;432053 341417;341418;341419;341420;341421;341422;341423;341424;341425;341426;341427;341428;341429 341420 9 TGLFPGSFVENI Unmodified 1279.6449 0.64485312 3112 Q7Z6J0 SH3RF1 E3 ubiquitin-protein ligase SH3RF1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 97.92 93.898 2 0.0015434 115814 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.744 73.788 41345000 0 41345000 0 0 0 0 0 0 0 0 0 0 0 0 0 51512 3112 46251 432054;432055 341430 341430 1 TGLGLASLPGPVK Unmodified 1208.7129 0.71287311 3251 Q8IWZ8 SUGP1 SURP and G-patch domain-containing protein 1 yes yes 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 78.464 78.57 2 0.0057578 91212 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 48.44 39.577 24727000 0 0 0 0 1746500 0 2149800 0 1847900 2872400 2689700 3869100 2312500 1696100 5543100 51513 3251 46252 432056;432057;432058;432059;432060;432061;432062;432063;432064 341431 341431 1 TGLLSFEESQR Unmodified 1265.6252 0.62518031 4317 Q9H089 LSG1 Large subunit GTPase 1 homolog yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.386 67.468 2 0.0022781 77306 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 79.974 59.104 64504000 0 0 0 6001100 3443800 4869300 5469100 5098500 4216600 4543500 7309900 6237100 4110400 4034900 9169500 51514 4317 46253 432065;432066;432067;432068;432069;432070;432071;432072;432073;432074;432075;432076 341432;341433;341434;341435;341436 341432 5 TGLLSGLDIMEVNPSLGK Oxidation (M) 1858.971 0.97101464 794 P05089 ARG1 Arginase-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 88.457 88.464 2 7.0672E-63 102492 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 170.95 145.94 40381000 0 0 0 5411900 3294500 0 0 14631000 2075600 11264000 0 0 0 3703300 0 51515 794 46254 432077;432078;432079;432080;432081;432082 341437;341438;341439;341440;341441;341442 341440 958 6 TGLLTETSSR Unmodified 1063.551 0.55095274 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 33.696 33.988 2 0.0014693 36134 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.906 80.196 96909000 0 0 0 0 3677700 0 7732400 0 0 9450600 17137000 22615000 13650000 8621300 14024000 51516 1286 46255 432083;432084;432085;432086;432087;432088;432089;432090;432091 341443;341444;341445;341446;341447;341448;341449;341450;341451;341452 341445 10 TGLSLWDTSPSYIDK Unmodified 1681.8199 0.81991695 210 O14757 CHEK1 Serine/threonine-protein kinase Chk1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 83.394 83.387 2 0.00053027 96525 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 63.727 38.872 8107900 0 0 0 0 1830400 3999100 0 2278400 0 0 0 0 0 0 0 51517 210 46256 432092;432093;432094;432095 341453;341454;341455;341456 341455 4 TGLSRSVSCDNVSK Unmodified 1508.7253 0.72530506 3775 Q96CB8 INTS12 Integrator complex subunit 12 yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 27.522 22.84 2;3 0.0038179 32248 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.045 55.032 75221000 72007000 0 3214600 0 0 0 0 0 0 0 0 0 0 0 0 51518 3775 46257 432096;432097;432098 341457;341458 341458 0 TGLSSEQTVNVLAQILK Unmodified 1799.9993 0.9992783 1351 P35269 GTF2F1 General transcription factor IIF subunit 1 yes yes 0 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 1 3 98.73 93.508 2 8.1759E-52 116955 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 141.13 101.34 75485000 13864000 61621000 0 0 0 0 0 0 0 0 0 0 0 0 0 51519 1351 46258 432099;432100;432101;432102 341459;341460;341461;341462 341462 4 TGLTPLMEAASGGYAEVGR Oxidation (M) 1894.9095 0.90947702 472;3250 Q8IWZ3;O75179 ANKHD1;ANKRD17 Ankyrin repeat and KH domain-containing protein 1;Ankyrin repeat domain-containing protein 17 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 76.872 76.931 2 5.8604E-50 88177 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 138.77 130.25 387520000 0 0 0 11699000 22947000 28694000 27340000 28504000 25993000 41778000 43460000 49684000 34066000 30296000 43059000 51520 3250;472 46259 432103;432104;432105;432106;432107;432108;432109;432110;432111;432112;432113;432114;432115;432116;432117;432118;432119;432120;432121;432122;432123;432124;432125;432126 341463;341464;341465;341466;341467;341468;341469;341470;341471;341472;341473;341474;341475;341476;341477;341478;341479 341469 597 14 TGLTPLMEAASGGYAEVGR Unmodified 1878.9146 0.9145624 472;3250 Q8IWZ3;O75179 ANKHD1;ANKRD17 Ankyrin repeat and KH domain-containing protein 1;Ankyrin repeat domain-containing protein 17 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 84.078 84.226 2 1.0389E-46 97207 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 160.48 147.52 64568000 0 0 0 0 0 0 0 6455100 3649400 7366600 7699400 8774000 2729900 6324300 21570000 51521 3250;472 46259 432127;432128;432129;432130;432131;432132;432133;432134 341480;341481;341482;341483;341484;341485;341486;341487;341488 341481 9 TGLVEFARNLTALGLNLVASGGTAK Unmodified 2472.37 0.37002225 1307 P31939 ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes yes 0 0 1 By MS/MS 3 0 1 1 102.66 99.104 3 0.00048943 118996 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 40.142 32.43 2753300 0 2753300 0 0 0 0 0 0 0 0 0 0 0 0 0 51522 1307 46260 432135 341489 341489 1 TGLYNYYDDEK Unmodified 1379.5881 0.5881261 1624 P50454 SERPINH1 Serpin H1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.157 51.258 2 0.00028278 57901 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 105.98 89.777 236300000 0 0 0 13350000 12712000 14956000 14123000 17508000 10544000 25643000 43289000 33328000 18732000 32120000 0 51523 1624 46261 432136;432137;432138;432139;432140;432141;432142;432143;432144;432145;432146;432147 341490;341491;341492;341493;341494;341495;341496;341497;341498;341499;341500;341501 341491 12 TGMESLTVTPCSK Oxidation (M) 1425.648 0.64796594 384 O60231 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 37.405 37.571 2 9.499E-06 41392 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 90.653 79.489 49414000 0 0 0 4036600 4426000 4708300 4643700 0 2910200 4056300 6482500 5373100 0 5281500 7496200 51524 384 46262 432148;432149;432150;432151;432152;432153;432154;432155;432156;432157;432158 341502;341503;341504;341505;341506;341507;341508;341509;341510 341506 494 9 TGMESLTVTPCSK Unmodified 1409.6531 0.65305132 384 O60231 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 52.212 52.29 2 0.0010556 58897 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 65.695 58.555 68652000 0 0 0 6706600 6841900 6344900 7222600 7057000 9077400 6041200 8621800 5858100 0 4880400 0 51525 384 46262 432159;432160;432161;432162;432163;432164;432165;432166;432167;432168 341511;341512;341513;341514 341512 4 TGMILLAGEITSR Oxidation (M) 1376.7334 0.73335055 1297 P31153 MAT2A S-adenosylmethionine synthase isoform type-2 yes yes 0 1 0 By MS/MS 2 0 1 1 79.254 71.124 2 0.027757 93354 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.915 17.711 17592000 17592000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51526 1297 46263 432169 341515;341516 341515 2 TGMILLAGEITSR Unmodified 1360.7384 0.73843593 1297 P31153 MAT2A S-adenosylmethionine synthase isoform type-2 yes yes 0 0 0 By MS/MS 2 0 1 1 89.186 81.056 2 0.0020191 105375 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.363 59.882 25514000 25514000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51527 1297 46263 432170 341517;341518 341518 2 TGMVRPGEPLSGEK Unmodified 1456.7344 0.73441319 3624 Q92560 BAP1 Ubiquitin carboxyl-terminal hydrolase BAP1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 37.872 36.761 3 0.007868 51609 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.595 33.73 92195000 23350000 12467000 0 14567000 3871700 4490400 4068100 0 3428000 5422700 0 9009100 0 0 11521000 51528 3624 46264 432171;432172;432173;432174;432175;432176;432177;432178;432179;432180 341519;341520;341521;341522;341523 341520 5 TGMYYLR Unmodified 902.43202 0.43202358 1171 P23921 RRM1 Ribonucleoside-diphosphate reductase large subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 48.003 48.212 2 0.02459 54331 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 97.596 30.603 69232000 0 0 0 0 0 27878000 0 0 0 0 0 0 23657000 17697000 0 51529 1171 46265 432181;432182;432183 341524;341525 341525 2 TGMYYLR Oxidation (M) 918.42694 0.4269382 1171 P23921 RRM1 Ribonucleoside-diphosphate reductase large subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 34.096 34.281 2 0.015367 37709 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 91.14 75.919 104890000 0 0 0 5143200 6967300 11828000 10088000 6058700 5788800 0 13478000 13388000 9747900 7243800 15159000 51530 1171 46265 432184;432185;432186;432187;432188;432189;432190;432191;432192;432193;432194 341526;341527;341528;341529;341530;341531;341532 341526 1696 7 TGNAEIQK Unmodified 859.43995 0.43994572 2346 Q13835 PKP1 Plakophilin-1 yes yes 0 0 0 By MS/MS 10 0 1 1 6.4441 6.6009 2 0.01012 4457 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 80.684 26.929 5054400 0 0 0 0 0 0 0 5054400 0 0 0 0 0 0 0 51531 2346 46266 432195 341533 341533 1 TGNAGEWCLMESDPGVFTELIK Acetyl (Protein N-term) 2495.1349 0.13486186 5235 Q9Y5K5 UCHL5 Ubiquitin carboxyl-terminal hydrolase isozyme L5 yes yes 1 0 0 By MS/MS 2 0 2 2 100.33 95.617 2;3 1.8727E-85 118250 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 151.8 139.42 70556000 0 70556000 0 0 0 0 0 0 0 0 0 0 0 0 0 51532 5235 46267 432196;432197 341534;341535 341535 2 TGNAGSRLACGVIGIAQ Unmodified 1643.8413 0.84133787 725 P00441 SOD1 Superoxide dismutase [Cu-Zn] yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 75.925 71.056 2 3.9564E-12 91673 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 139.46 126.85 1737800000 1260500000 436500000 40798000 0 0 0 0 0 0 0 0 0 0 0 0 51533 725 46268 432198;432199;432200;432201 341536;341537;341538;341539;341540 341538 5 TGNAWHSK Unmodified 899.42496 0.42496436 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 6.6064 3.6145 2 0.0025531 5369 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.87 88.933 380510000 194870000 92254000 93379000 0 0 0 0 0 0 0 0 0 0 0 0 51534 894 46269 432202;432203;432204 341541;341542;341543;341544 341541 3 TGNFQVTELGR Unmodified 1220.6149 0.61494998 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.821 56.932 2 4.3237E-11 64967 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 155.06 124.89 416710000 0 0 0 21942000 24381000 41662000 25210000 28536000 24963000 39476000 41772000 58895000 0 43308000 66565000 51535 528 46270 432205;432206;432207;432208;432209;432210;432211;432212;432213;432214;432215;432216 341545;341546;341547;341548;341549;341550;341551;341552;341553;341554;341555;341556;341557 341552 13 TGNGGAQSQHQNVNQGPTCNVGSK Unmodified 2439.0945 0.09454546 3155 Q86UU0 BCL9L B-cell CLL/lymphoma 9-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 16.388 16.234 3 7.351E-39 21181 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.31 106.26 59450000 0 8547600 0 2215800 1766800 3030800 0 3131200 4656200 3312500 5209600 10017000 5833100 0 11730000 51536 3155 46271 432217;432218;432219;432220;432221;432222;432223;432224;432225;432226;432227 341558;341559;341560;341561;341562;341563;341564 341559 7 TGNIPALVR Unmodified 939.55016 0.55016488 1754 P55060 CSE1L Exportin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 52.906 53.028 2 0.010514 59078 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.207 37.07 528400000 0 0 0 11696000 10801000 115330000 16903000 13813000 28715000 70375000 48768000 49974000 0 0 162030000 51537 1754 46272 432228;432229;432230;432231;432232;432233;432234;432235;432236;432237 341565;341566;341567;341568;341569;341570;341571 341570 4 TGNLGALIK Unmodified 885.52837 0.5283668 3066 Q7RTS9 DYM Dymeclin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 54.329 54.594 2 0.0073015 62394 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 72.789 34.656 24521000 0 0 0 0 0 0 5020900 6188200 3115200 0 0 0 4697700 0 5499200 51538 3066 46273 432238;432239;432240;432241;432242;432243;432244 341572;341573;341574;341575;341576;341577 341573 6 TGNLGNVVHIER Unmodified 1307.6946 0.69459728 2937 Q6P5R6 RPL22L1 60S ribosomal protein L22-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 2 2 1 1 1 2 2 2 2 2 2 48.851 49.053 2;3 0.00043318 55383 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 80.014 65.808 1843200000 0 0 0 9132300 110620000 173070000 10445000 8662300 23974000 267610000 210770000 347050000 176150000 154330000 351360000 51539 2937 46274 432245;432246;432247;432248;432249;432250;432251;432252;432253;432254;432255;432256;432257;432258;432259;432260;432261;432262;432263;432264 341578;341579;341580;341581;341582;341583;341584;341585 341581 6 TGNLYLR Unmodified 835.4552 0.45520186 978 P13284 IFI30 Gamma-interferon-inducible lysosomal thiol reductase yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 34.327 34.731 2 0.041588 37187 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.081 38.274 11130000 0 0 0 0 0 0 0 0 0 1281500 0 0 2023900 0 7824900 51540 978 46275 432265;432266;432267 341586 341586 1 TGNQHFGYLYGR Unmodified 1411.6633 0.66329715 3476 Q8TAT6 NPLOC4 Nuclear protein localization protein 4 homolog yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 1 1 1 1 1 2 1 1 2 2 46.532 46.76 2;3 0.0075012 51704 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 31.35 23.035 159150000 0 0 0 7353000 2920400 12993000 10412000 5832700 5013900 14643000 14506000 24832000 12460000 20550000 27635000 51541 3476 46276 432268;432269;432270;432271;432272;432273;432274;432275;432276;432277;432278;432279;432280;432281;432282 341587;341588;341589;341590;341591;341592 341592 5 TGNSMPHPATGK Oxidation (M) 1212.5557 0.55572054 2289 Q13428 TCOF1 Treacle protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.9 3.81 6 2 12 2 4 2 1 1 1 1 1 1 1 1 1 1 1 1 5.9538 4.7991 2;3 4.2941E-06 3746 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 106.67 79.519 1085400000 249180000 477400000 43980000 26737000 19950000 16512000 26200000 17814000 16899000 32357000 24405000 33536000 30277000 31183000 39013000 51542 2289 46277 432283;432284;432285;432286;432287;432288;432289;432290;432291;432292;432293;432294;432295;432296;432297;432298;432299;432300;432301;432302 341593;341594;341595;341596;341597;341598;341599;341600;341601;341602;341603;341604;341605;341606;341607;341608;341609 341606 3730 14 TGNSMPHPATGK Unmodified 1196.5608 0.56080592 2289 Q13428 TCOF1 Treacle protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.96 3.45 6 1 20 2 3 2 2 1 2 2 1 2 2 2 2 2 2 13.656 12.936 2;3 3.9577E-24 16223 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 171.67 125.21 1164900000 491640000 347720000 34631000 0 18895000 16420000 21114000 18995000 14208000 29850000 32515000 38137000 35991000 26160000 38649000 51543 2289 46277 432303;432304;432305;432306;432307;432308;432309;432310;432311;432312;432313;432314;432315;432316;432317;432318;432319;432320;432321;432322;432323;432324;432325;432326;432327;432328;432329 341610;341611;341612;341613;341614;341615;341616;341617;341618;341619;341620;341621;341622;341623;341624;341625;341626 341614 8 TGPAAAQVQVGK Unmodified 1125.6142 0.6142217 2289 Q13428 TCOF1 Treacle protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29.204 28.616 2 4.1112E-16 36137 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 173.75 151.06 615030000 7359100 52243000 0 33464000 30432000 30036000 35625000 31925000 29552000 52803000 73666000 70910000 48346000 48616000 70053000 51544 2289 46278 432330;432331;432332;432333;432334;432335;432336;432337;432338;432339;432340;432341;432342;432343 341627;341628;341629;341630;341631;341632;341633;341634;341635;341636;341637;341638;341639;341640;341641;341642;341643;341644;341645;341646;341647 341632 21 TGPEMQNILK Oxidation (M) 1145.5751 0.575059 5043 Q9UNW1 MINPP1 Multiple inositol polyphosphate phosphatase 1 yes yes 0 1 0 By MS/MS 2 0 1 1 39.315 34.303 2 0.020268 44742 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.558 36.143 22023000 0 22023000 0 0 0 0 0 0 0 0 0 0 0 0 0 51545 5043 46279 432344 341648 341648 6395 1 TGPEMQNILK Unmodified 1129.5801 0.58014438 5043 Q9UNW1 MINPP1 Multiple inositol polyphosphate phosphatase 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 64.036 58.694 2 0.0033254 75459 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.034 71.879 106500000 0 106500000 0 0 0 0 0 0 0 0 0 0 0 0 0 51546 5043 46279 432345;432346 341649 341649 1 TGPFCVNHEPGRAGTIK Unmodified 1839.905 0.90500076 3246 Q8IWV7 UBR1 E3 ubiquitin-protein ligase UBR1 yes yes 0 0 1 By MS/MS 2 0 1 1 50.344 42.444 3 0.0034766 58742 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.165 47.744 8898400 8898400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51547 3246 46280 432347 341650 341650 1 TGPLPWPAGFQPR Unmodified 1422.7408 0.74081919 2517 Q15334 LLGL1 Lethal(2) giant larvae protein homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 84.785 84.907 2 0.014561 98085 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.75 31.105 16058000 0 0 0 0 0 0 0 0 0 2514200 0 3139400 1926900 2855000 5622800 51548 2517 46281 432348;432349;432350;432351;432352 341651 341651 1 TGPNLHGLFGRK Unmodified 1295.7099 0.70985342 2028 P99999;CON__P62894 CYCS Cytochrome c yes no 0 0 1 By MS/MS 10 0 1 1 50.014 50.725 3 4.7176E-05 56343 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.276 50.545 27742000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27742000 51549 2028 46282 432353 341652 341652 1 TGPPMGSR Unmodified 801.38032 0.38032236 2490 Q15056 EIF4H Eukaryotic translation initiation factor 4H yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.873 13.028 2 0.018722 11813 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.207 34.869 126930000 0 0 0 5528000 4465100 4790600 6825900 9007800 4504100 9142200 17522000 20130000 7375000 14108000 23534000 51550 2490 46283 432354;432355;432356;432357;432358;432359;432360;432361;432362;432363;432364;432365 341653 341653 1 TGPQLLELSPGEGFSIQEK Unmodified 2029.0368 0.036786022 2086 Q03001 DST Dystonin yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 90.831 86.77 2 0.0020989 107991 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 48.351 17.462 27257000 0 27257000 0 0 0 0 0 0 0 0 0 0 0 0 0 51551 2086 46284 432366;432367 341654;341655 341654 2 TGPQNGWNDPPALNRVPK Unmodified 1959.9915 0.99150758 614 O94979 SEC31A Protein transport protein Sec31A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 62.153 62.404 3 0.0057634 71699 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 32.688 26.964 44941000 0 0 0 0 0 0 0 0 4456500 7046500 7315600 12770000 6038100 7313700 0 51552 614 46285 432368;432369;432370;432371;432372;432373 341656;341657 341657 2 TGPTQQQVEGR Unmodified 1199.5895 0.58946351 4171 Q9BUT9 FAM195A Protein FAM195A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.303 14.466 2 8.9834E-11 13762 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 151.83 138.23 158590000 0 0 0 9253900 7422000 10870000 8142200 12305000 6686400 14606000 17885000 17123000 15971000 12420000 25904000 51553 4171 46286 432374;432375;432376;432377;432378;432379;432380;432381;432382;432383;432384;432385 341658;341659;341660;341661;341662;341663;341664;341665;341666;341667;341668 341659 10 TGPTVTQVK Unmodified 929.5182 0.51819605 2289 Q13428 TCOF1 Treacle protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.53 2.94 1 2 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 21.718 21.028 2 2.6489E-05 21613 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 141.39 93.54 868460000 429210 171440000 0 39899000 40713000 37219000 47702000 43041000 34955000 61855000 89657000 93382000 72245000 60078000 75845000 51554 2289 46287 432386;432387;432388;432389;432390;432391;432392;432393;432394;432395;432396;432397;432398;432399;432400 341669;341670;341671;341672;341673;341674;341675;341676;341677;341678 341675 4 TGQAAELGGLLK Unmodified 1156.6452 0.64518747 129 O00231 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.31 3.1 1 2 10 2 1 1 1 1 1 1 1 1 1 1 1 69.74 68.421 2 1.3061E-08 78078 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 121.6 95.219 712030000 60736000 30002000 0 39067000 54898000 72508000 0 25503000 20685000 126650000 0 166930000 28398000 0 86656000 51555 129 46288 432401;432402;432403;432404;432405;432406;432407;432408;432409;432410;432411;432412;432413 341679;341680;341681;341682;341683;341684;341685;341686;341687;341688;341689;341690;341691 341685 12 TGQAGSLSGSPK Unmodified 1088.5462 0.54620171 5005 Q9ULU4 ZMYND8 Protein kinase C-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 12.58 12.784 2 0.00018736 10910 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 84.658 65.876 45538000 0 0 0 0 3586100 0 3836500 3440400 3301500 6037100 3775200 5608800 5567600 4187000 6198200 51556 5005 46289 432414;432415;432416;432417;432418;432419;432420;432421;432422;432423 341692;341693;341694;341695;341696;341697;341698;341699 341696 5 TGQAPGYSYTAANK Unmodified 1427.6681 0.66810776 2028 P99999 CYCS Cytochrome c yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 6.27 4.11 2 2 1 6 1 3 1 1 1 1 1 1 1 44.596 44.275 2 5.9227E-11 102022 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 122.7 111.95 520970000 76564000 315290000 705270 0 0 0 2007100 0 0 0 26941000 20937000 1990900 20194000 56333000 51557 2028 46290 432424;432425;432426;432427;432428;432429;432430;432431;432432;432433;432434 341700;341701;341702;341703;341704;341705;341706 341704 5 TGQATVASGIPAGWMGLDCGPESSK Oxidation (M) 2492.1312 0.13117347 733 P00558 PGK1 Phosphoglycerate kinase 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.67 3.9 1 6 3 8 2 8 2 2 2 2 82.998 81.054 2;3 2.2521E-92 93127 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 144.73 141.63 2588100000 125900000 2214800000 0 0 0 0 0 0 0 0 41758000 42686000 0 28990000 133960000 51558 733 46291 432435;432436;432437;432438;432439;432440;432441;432442;432443;432444;432445;432446;432447;432448;432449;432450;432451;432452 341707;341708;341709;341710;341711;341712;341713;341714;341715;341716;341717;341718;341719;341720;341721;341722;341723 341717 890 14 TGQATVASGIPAGWMGLDCGPESSK Unmodified 2476.1363 0.13625884 733 P00558 PGK1 Phosphoglycerate kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.38 3.91 5 1 7 1 3 2 2 1 2 2 86.009 84.103 2;3 5.0807E-115 104684 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 221.37 217.85 6733700000 83957000 6428600000 19563000 0 0 0 0 0 0 0 19682000 11529000 0 17223000 153130000 51559 733 46291 432453;432454;432455;432456;432457;432458;432459;432460;432461;432462;432463;432464;432465 341724;341725;341726;341727;341728;341729;341730;341731;341732;341733;341734;341735;341736;341737 341727 13 TGQATVASGIPAGWMGLDCGPESSKK Oxidation (M) 2620.2261 0.22613648 733 P00558 PGK1 Phosphoglycerate kinase 1 yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 78.241 74.528 3 5.0049E-05 92706 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 43.554 31 35130000 0 31699000 3430900 0 0 0 0 0 0 0 0 0 0 0 0 51560 733 46292 432466;432467 341738 341738 890 1 TGQATVASGIPAGWMGLDCGPESSKK Unmodified 2604.2312 0.23122186 733 P00558 PGK1 Phosphoglycerate kinase 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 85.648 80.874 3 5.6484E-15 100512 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.139 73.58 80780000 0 80780000 0 0 0 0 0 0 0 0 0 0 0 0 0 51561 733 46292 432468;432469 341739;341740 341739 2 TGQEIPVNVR Unmodified 1111.5986 0.59857163 3910 Q96KP4 CNDP2 Cytosolic non-specific dipeptidase yes yes 0 0 0 By MS/MS 2 0 1 1 49.881 44.174 2 0.033517 57391 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 57.59 41.079 42619000 0 42619000 0 0 0 0 0 0 0 0 0 0 0 0 0 51562 3910 46293 432470 341741 341741 1 TGQEIPVNVRFCLEGMEESGSEGLDELIFARK Unmodified 3609.7443 0.74433253 3910 Q96KP4 CNDP2 Cytosolic non-specific dipeptidase yes yes 0 0 2 By MS/MS 2 0 1 1 98.337 90.206 4 0.036531 116402 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 16.663 10.792 14177000 14177000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51563 3910 46294 432471 341742 341742 1 TGQEVVFVAEPDNK Unmodified 1531.7518 0.75183739 789 P04844 RPN2 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 58.145 58.221 2 2.132E-05 65418 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.641 65.312 82333000 0 0 0 13418000 7807100 0 5783700 0 0 8626300 0 14104000 12116000 9415700 11063000 51564 789 46295 432472;432473;432474;432475;432476;432477;432478;432479 341743;341744;341745;341746;341747;341748;341749;341750;341751 341744 9 TGQEYKPGNPPAEIGQNISSNSSASILESK Unmodified 3102.5106 0.51055107 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 73.681 72.517 3 6.1817E-271 90086 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 229.7 224.04 1696300000 58267000 757950000 67542000 15684000 45573000 77708000 36260000 49599000 49253000 97357000 93091000 102350000 47068000 63217000 135430000 51565 848 46296 432480;432481;432482;432483;432484;432485;432486;432487;432488;432489;432490;432491;432492;432493;432494;432495 341752;341753;341754;341755;341756;341757;341758;341759;341760;341761;341762;341763;341764;341765;341766;341767;341768;341769;341770 341756 19 TGQLAAIK Unmodified 800.4756 0.47560295 3330;695 Q8N4C8;O95819 MINK1;MAP4K4 Misshapen-like kinase 1;Mitogen-activated protein kinase kinase kinase kinase 4 no no 0 0 0 By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 26.843 26.999 2 0.034341 29129 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 53.163 7.281 51191000 0 0 0 3996600 4847100 720780 4229000 0 0 8721600 7710200 7060800 6725600 7179600 0 51566 3330;695 46297 432496;432497;432498;432499;432500;432501;432502;432503;432504 341771 341771 1 TGQLEGAPAPGPAASPQTLDHSGATATGGASELK Unmodified 3144.5323 0.53234915 1767 P55317 FOXA1 Hepatocyte nuclear factor 3-alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.56 1 1 13 2 1 1 1 1 1 1 1 1 1 1 2 1 64.217 63.598 3;4 3.8787E-118 80546 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.12 125.13 394330000 0 85193000 0 12732000 16058000 19695000 31172000 19038000 14392000 27822000 33920000 30469000 28253000 35015000 40566000 51567 1767 46298 432505;432506;432507;432508;432509;432510;432511;432512;432513;432514;432515;432516;432517;432518;432519 341772;341773;341774;341775;341776;341777;341778;341779;341780;341781;341782;341783;341784;341785;341786;341787;341788 341775 17 TGQLFLK Unmodified 805.46979 0.46978929 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 47.216 47.39 2 0.023354 52412 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 89.673 54.568 111840000 0 0 0 7139300 7657500 0 8632000 9501400 4015200 11086000 12923000 14329000 11134000 9364800 16059000 51568 2930 46299 432520;432521;432522;432523;432524;432525;432526;432527;432528;432529;432530 341789;341790;341791;341792;341793 341793 5 TGQMTPFGTQIPQK Unmodified 1532.7657 0.76571331 2097;913 Q03468;P0DP91 ERCC6 DNA excision repair protein ERCC-6 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.677 64.765 2 0.00032744 73956 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 78.342 64.941 77640000 0 0 0 4924300 5074600 7565500 3807700 4527800 3374600 5351600 7637600 8380500 5497000 7246600 14252000 51569 2097;913 46300 432531;432532;432533;432534;432535;432536;432537;432538;432539;432540;432541;432542 341794;341795;341796;341797;341798;341799;341800;341801;341802;341803;341804;341805;341806;341807;341808 341797 14 TGQMTPFGTQIPQK Oxidation (M) 1548.7606 0.76062794 2097;913 Q03468;P0DP91 ERCC6 DNA excision repair protein ERCC-6 no no 0 1 0 By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 54.998 55.189 2 2.5127E-19 61892 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 134.3 125.35 133070000 0 0 0 9003900 0 10513000 13597000 6703400 12549000 11600000 12343000 14805000 16031000 11253000 14675000 51570 2097;913 46300 432543;432544;432545;432546;432547;432548;432549;432550;432551;432552;432553 341809;341810;341811;341812 341811 1180 4 TGQPMINLYTDR Oxidation (M) 1423.6766 0.67656396 1363 P35637 FUS RNA-binding protein FUS yes yes 0 1 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 56.726 57.03 2 0.013157 64046 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 40.727 22.863 22513000 0 0 0 0 0 0 0 0 0 7691700 0 8066000 0 6755200 0 51571 1363 46301 432554;432555;432556 341813 341813 2109 1 TGQPMINLYTDR Unmodified 1407.6816 0.68164933 1363 P35637 FUS RNA-binding protein FUS yes yes 0 0 0 By MS/MS 10 0 1 1 66.79 66.987 2 0.0015943 76137 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 66.595 55.431 14264000 0 0 0 0 0 0 0 0 0 0 0 0 0 14264000 0 51572 1363 46301 432557 341814 341814 1 TGQPMINLYTDRETGK Oxidation (M) 1838.8833 0.88326227 1363 P35637 FUS RNA-binding protein FUS yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 6 18 2 2 2 1 1 1 2 1 1 2 1 2 2 1 3 50.312 49.604 2;3 2.1548E-15 55949 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 101.42 95.258 1673300000 88219000 113850000 136060000 82603000 104030000 87128000 151820000 7172000 77429000 93848000 130370000 180860000 139860000 132350000 147680000 51573 1363 46302 432558;432559;432560;432561;432562;432563;432564;432565;432566;432567;432568;432569;432570;432571;432572;432573;432574;432575;432576;432577;432578;432579;432580;432581 341815;341816;341817;341818;341819;341820;341821;341822;341823;341824;341825;341826;341827;341828;341829;341830;341831;341832;341833;341834;341835;341836;341837;341838;341839;341840;341841;341842;341843 341820 2109 29 TGQPMINLYTDRETGK Unmodified 1822.8883 0.88834765 1363 P35637 FUS RNA-binding protein FUS yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.29 6 1 24 1 4 2 2 2 2 2 2 2 2 2 2 2 2 2 60.1 59.111 2;3 3.9422E-72 77343 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 186.56 168.76 2591300000 268450000 363070000 207660000 101310000 74423000 94147000 121480000 138260000 87876000 122220000 171700000 158150000 168670000 156040000 357890000 51574 1363 46302 432582;432583;432584;432585;432586;432587;432588;432589;432590;432591;432592;432593;432594;432595;432596;432597;432598;432599;432600;432601;432602;432603;432604;432605;432606;432607;432608;432609;432610;432611;432612 341844;341845;341846;341847;341848;341849;341850;341851;341852;341853;341854;341855;341856;341857;341858;341859;341860;341861;341862;341863;341864;341865 341850 15 TGQPSAPGDTSVNGPV Unmodified 1482.6951 0.69505079 2727 Q5H9R7 PPP6R3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 47.021 47.255 2 0.014766 53237 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 48.998 34.791 73330000 0 0 0 0 3826500 7189700 4709900 4835300 3058300 7501800 7627300 10067000 7986800 6068900 10459000 51575 2727 46303 432613;432614;432615;432616;432617;432618;432619;432620;432621;432622;432623 341866;341867;341868;341869 341867 4 TGQQAEPLVVDLK Unmodified 1396.7562 0.75619449 2021 P98082 DAB2 Disabled homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 69.85 68.639 2 2.8198E-13 78547 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 160.72 142.41 1364400000 12778000 543080000 3225100 34984000 30721000 47191000 71298000 44446000 54761000 76014000 86793000 63363000 57678000 81467000 156570000 51576 2021 46304 432624;432625;432626;432627;432628;432629;432630;432631;432632;432633;432634;432635;432636;432637;432638;432639 341870;341871;341872;341873;341874;341875;341876;341877;341878;341879;341880;341881;341882;341883;341884;341885;341886;341887;341888;341889 341877 20 TGQSADSGTIK Unmodified 1063.5146 0.51456723 4525 Q9HD26 GOPC Golgi-associated PDZ and coiled-coil motif-containing protein yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 8.9311 5.4171 2 0.027371 7904 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 54.416 17.323 8414200 131320 8282900 0 0 0 0 0 0 0 0 0 0 0 0 0 51577 4525 46305 432640;432641 341890 341890 1 TGQSLATLHAHK Unmodified 1262.6731 0.67313356 4293 Q9C0J8 WDR33 pre-mRNA 3' end processing protein WDR33 yes yes 0 0 0 By MS/MS By MS/MS By matching 2.4 0.49 3 2 2 2 1 24.532 20.357 3 0.0032681 27814 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.153 51.023 178950000 151800000 24129000 3017100 0 0 0 0 0 0 0 0 0 0 0 0 51578 4293 46306 432642;432643;432644;432645;432646 341891;341892;341893 341893 3 TGRDCIQYIK Unmodified 1252.6234 0.62340617 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33.63 32.779 3 0.0045669 34158 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.401 30.548 800800000 456340000 52870000 45879000 12053000 11949000 20821000 18237000 14943000 12449000 24733000 21890000 33375000 15688000 17721000 41860000 51579 2431 46307 432647;432648;432649;432650;432651;432652;432653;432654;432655;432656;432657;432658;432659;432660;432661 341894;341895;341896;341897;341898;341899;341900;341901;341902;341903;341904 341897 7 TGREDIANLADEFK Unmodified 1577.7686 0.76855009 4061 Q99798 ACO2 Aconitate hydratase, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 78.609 73.423 3 0.00065858 92846 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 53.491 48.313 105070000 8958600 88418000 7696300 0 0 0 0 0 0 0 0 0 0 0 0 51580 4061 46308 432662;432663;432664 341905;341906;341907 341905 3 TGRETEAAPTSPPIVPLK Unmodified 1863.0102 0.010177341 3080 Q7Z3B3 KANSL1 KAT8 regulatory NSL complex subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63.322 62.717 3 0.00092333 71320 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.883 44.841 96980000 0 18050000 4976000 4759400 3306200 3876500 5214100 7381000 2572300 7064600 6060500 12787000 7163700 5442000 8326700 51581 3080 46309 432665;432666;432667;432668;432669;432670;432671;432672;432673;432674;432675;432676;432677;432678 341908;341909;341910;341911;341912;341913;341914;341915;341916;341917;341918 341917 11 TGRISVPIDLQK Unmodified 1325.7667 0.76669959 1582 P49642 PRIM1 DNA primase small subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 71.209 65.327 3 0.01066 86385 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 37.613 14.893 110190000 83578000 25047000 1560400 0 0 0 0 0 0 0 0 0 0 0 0 51582 1582 46310 432679;432680;432681 341919;341920 341920 2 TGRLPEAAFLAR Unmodified 1300.7252 0.72516913 1358 P35606 COPB2 Coatomer subunit beta' yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.805 64.894 3 0.0012212 73959 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 52.576 43.847 62983000 0 0 0 1687300 1561100 3348800 2547200 4374800 2231300 5923800 6704000 9946500 5328600 5539500 13790000 51583 1358 46311 432682;432683;432684;432685;432686;432687;432688;432689;432690;432691;432692;432693 341921;341922;341923;341924;341925;341926;341927;341928 341928 8 TGRVMLGETNPADSK Oxidation (M) 1590.7672 0.76716988 1138;1022 P22392;O60361;P15531 NME2;NME2P1;NME1 Nucleoside diphosphate kinase B;Putative nucleoside diphosphate kinase;Nucleoside diphosphate kinase A no no 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2.76 2.16 20 3 2 11 6 6 1 1 34.818 30.569 2;3 2.7281E-43 41055 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 158.11 124.24 5112900000 2858600000 1070300000 1158400000 0 0 0 0 15799000 0 0 9823500 0 0 0 0 51584 1138;1022 46312 432694;432695;432696;432697;432698;432699;432700;432701;432702;432703;432704;432705;432706;432707;432708;432709;432710;432711;432712;432713;432714;432715;432716;432717;432718 341929;341930;341931;341932;341933;341934;341935;341936;341937;341938;341939;341940;341941;341942;341943;341944;341945;341946;341947;341948;341949;341950;341951;341952;341953;341954;341955;341956;341957 341940 1420 28 TGRVMLGETNPADSK Unmodified 1574.7723 0.77225526 1138;1022 P22392;O60361;P15531 NME2;NME2P1;NME1 Nucleoside diphosphate kinase B;Putative nucleoside diphosphate kinase;Nucleoside diphosphate kinase A no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 3.12 2.62 6 1 1 2 3 2 1 39.569 35.183 2;3 5.7547E-45 44139 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 170.79 141.83 7241500000 5058800000 1718200000 454570000 0 0 0 0 0 9989600 0 0 0 0 0 0 51585 1138;1022 46312 432719;432720;432721;432722;432723;432724;432725;432726 341958;341959;341960;341961;341962;341963;341964;341965;341966;341967 341967 8 TGRVMLGETNPADSKPGTIR Oxidation (M) 2115.0743 0.074250936 1138;1022 P22392;O60361;P15531 NME2;NME2P1;NME1 Nucleoside diphosphate kinase B;Putative nucleoside diphosphate kinase;Nucleoside diphosphate kinase A no no 0 1 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 13 2 2 1 1 2 1 1 1 1 1 40.254 40.307 3;4 2.4785E-13 44937 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 76.015 67.926 481360000 0 0 0 23380000 23309000 23136000 108180000 88926000 21493000 14200000 20916000 146180000 0 0 11633000 51586 1138;1022 46313 432727;432728;432729;432730;432731;432732;432733;432734;432735;432736;432737;432738;432739 341968;341969;341970;341971;341972 341970 1420 4 TGSAVAPVHPPNR Unmodified 1301.684 0.6840326 3296 Q8IZL8 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.076 28.271 3 0.0018995 29328 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 55.98 37.79 204840000 0 0 0 8606900 12205000 11822000 10537000 11712000 8569400 15999000 22437000 30493000 25339000 20323000 26799000 51587 3296 46314 432740;432741;432742;432743;432744;432745;432746;432747;432748;432749;432750;432751 341973;341974;341975;341976;341977;341978;341979;341980;341981 341978 4 TGSAVPRELLEK Unmodified 1298.7194 0.71941505 1704 P52888 THOP1 Thimet oligopeptidase yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 40.841 35.729 3 0.02584 49502 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 35.737 7.8751 78080000 76575000 0 1505000 0 0 0 0 0 0 0 0 0 0 0 0 51588 1704 46315 432752;432753 341982 341982 1 TGSEESTMMSYFSK Oxidation (M) 1599.6433 0.6432745 545 O75818 RPP40 Ribonuclease P protein subunit p40 yes yes 0 1 0 By MS/MS 2 0 1 1 54.003 48.211 2 0.0013779 62359 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.479 69.8 11961000 0 11961000 0 0 0 0 0 0 0 0 0 0 0 0 0 51589 545 46316 432754 341983 341983 704 1 TGSEESTMMSYFSK Unmodified 1583.6484 0.64835987 545 O75818 RPP40 Ribonuclease P protein subunit p40 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 78.841 74.764 2 3.7222E-52 93123 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 188.06 181.17 148980000 0 148980000 0 0 0 0 0 0 0 0 0 0 0 0 0 51590 545 46316 432755;432756 341984 341984 1 TGSEESTMMSYFSK 2 Oxidation (M) 1615.6382 0.63818912 545 O75818 RPP40 Ribonuclease P protein subunit p40 yes yes 0 2 0 By MS/MS 2 0 1 1 38.16 33.193 2 0.028373 43429 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 44.847 34.089 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51591 545 46316 432757 341985 341985 704 1 TGSENDFVVLK Unmodified 1207.6085 0.60846762 103 CON__Q7Z794;Q7Z794 KRT77 Keratin, type II cytoskeletal 1b yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 61.101 60.843 2 0.014077 70214 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 57.55 45.702 + 17730000 0 0 0 9888000 0 0 0 7842400 0 0 0 0 0 0 0 51592 103 46317 432758;432759;432760;432761 341986;341987;341988;341989 341989 3 TGSENDFVVLKK Unmodified 1335.7034 0.70343063 103 CON__Q7Z794;Q7Z794 KRT77 Keratin, type II cytoskeletal 1b yes no 0 0 1 By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 2 2 46.534 46.749 2;3 0.024259 52454 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 29.805 22.195 + 109110000 0 0 0 20665000 0 0 13790000 0 0 19319000 0 55340000 0 0 0 51593 103 46318 432762;432763;432764;432765;432766;432767 341990;341991;341992;341993 341990 1 TGSEPALSPAVVR Unmodified 1282.6881 0.68811492 543 O75815 BCAR3 Breast cancer anti-estrogen resistance protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.546 52.69 2 7.8403E-05 60516 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 86.624 76.671 56938000 0 0 0 2755200 2884600 3568500 3402300 3324700 2586100 5402400 6808900 6479200 4823500 4631300 10271000 51594 543 46319 432768;432769;432770;432771;432772;432773;432774;432775;432776;432777;432778;432779 341994;341995;341996;341997;341998;341999;342000;342001;342002;342003;342004;342005 342005 12 TGSERVSQQCK Unmodified 1278.5986 0.59864799 5284 Q9Y6I3 EPN1 Epsin-1 yes yes 0 0 1 By matching By MS/MS By MS/MS 2 0 3 1 1 1 6.0295 3.0703 3 0.0025109 5190 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 63.408 48.206 67128000 25930000 13041000 28157000 0 0 0 0 0 0 0 0 0 0 0 0 51595 5284 46320 432780;432781;432782 342006;342007;342008 342007 3 TGSESSIDRLMK Oxidation (M) 1338.6449 0.64492948 5267 Q9Y678 COPG1 Coatomer subunit gamma-1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2 0 6 2 2 2 29.676 25.27 2;3 0.0031114 33367 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.548 51.181 196200000 25736000 98876000 71582000 0 0 0 0 0 0 0 0 0 0 0 0 51596 5267 46321 432783;432784;432785;432786;432787;432788 342009;342010;342011 342009 6672 2 TGSESSIDRLMK Unmodified 1322.65 0.65001485 5267 Q9Y678 COPG1 Coatomer subunit gamma-1 yes yes 0 0 1 By matching By MS/MS By MS/MS 2.5 0.5 2 2 1 1 2 48.341 43.821 2;3 0.00015544 54978 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 107.24 78.845 61016000 159710 7344400 53512000 0 0 0 0 0 0 0 0 0 0 0 0 51597 5267 46321 432789;432790;432791;432792 342012;342013;342014;342015;342016 342016 5 TGSESSQTGTSTTSSR Unmodified 1572.6863 0.6863366 1166 P23588 EIF4B Eukaryotic translation initiation factor 4B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 5.9873 6.1047 2 3.7679E-98 3328 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 240.6 238.45 78697000 0 0 0 3190400 3500000 3736100 5888400 4831100 3723800 3631200 11283000 11411000 4481800 7035700 15984000 51598 1166 46322 432793;432794;432795;432796;432797;432798;432799;432800;432801;432802;432803;432804 342017;342018;342019;342020;342021;342022;342023;342024;342025;342026;342027 342020 11 TGSESSVDRLMK Oxidation (M) 1324.6293 0.62927941 4839 Q9UBF2 COPG2 Coatomer subunit gamma-2 yes yes 0 1 1 By MS/MS 2 0 1 1 20.885 18.082 3 0.028572 23148 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 55.04 42.084 14827000 0 0 14827000 0 0 0 0 0 0 0 0 0 0 0 0 51599 4839 46323 432805 342028 342028 0 TGSGDIENYNDATQVR Unmodified 1738.7758 0.77582031 785 P19961;P04746;P04745 AMY2B;AMY2A;AMY1A Alpha-amylase 2B;Pancreatic alpha-amylase;Alpha-amylase 1 yes no 0 0 0 By matching By MS/MS By matching By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 42.645 42.658 2 2.4188E-27 47654 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 128.85 106.31 + 31370000 0 0 0 3153300 3460700 2248300 0 7861000 1278600 0 0 13368000 0 0 0 51600 785 46324 432806;432807;432808;432809;432810;432811 342029;342030 342029 2 TGSGGVASSSESNR Unmodified 1294.5749 0.57493566 2534 Q15428 SF3A2 Splicing factor 3A subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.4584 6.5822 2 2.566E-26 4769 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 151.79 138.02 83365000 0 0 0 3428500 6714400 8584100 8979500 7437000 6729300 4118700 8226800 8367200 6269700 6041800 8467600 51601 2534 46325 432812;432813;432814;432815;432816;432817;432818;432819;432820;432821;432822;432823 342031;342032;342033;342034;342035;342036;342037;342038;342039;342040;342041;342042 342036 12 TGSGGVASSSESNRDR Unmodified 1565.703 0.70298972 2534 Q15428 SF3A2 Splicing factor 3A subunit 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 6.1393 6.2762 3 4.2072E-20 4305 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 91.076 71.865 51502000 0 0 0 2434100 0 4278600 4398000 0 2276700 4748800 8068700 7737000 4778600 5850200 6931100 51602 2534 46326 432824;432825;432826;432827;432828;432829;432830;432831;432832;432833;432834 342043;342044;342045;342046;342047;342048;342049;342050;342051;342052;342053;342054;342055 342053 13 TGSGGVASSSESNRDRR Unmodified 1721.8041 0.80410074 2534 Q15428 SF3A2 Splicing factor 3A subunit 2 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 5.7057 5.8139 3;4 4.4667E-53 3754 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 164.65 136.1 1276100000 0 0 0 76943000 62574000 71059000 107690000 76601000 83188000 120640000 112770000 171590000 86962000 171000000 135110000 51603 2534 46327 432835;432836;432837;432838;432839;432840;432841;432842;432843;432844;432845;432846;432847;432848;432849;432850;432851;432852;432853;432854;432855;432856;432857;432858 342056;342057;342058;342059;342060;342061;342062;342063;342064;342065;342066;342067;342068;342069 342067 13 TGSGLNSFYDQR Unmodified 1343.6106 0.61059288 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 51.38 51.522 2 5.4315E-05 58252 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 115.89 103.6 129530000 0 0 0 12151000 10653000 0 11619000 12068000 9801400 18068000 11666000 17067000 0 12349000 14087000 51604 1601 46328 432859;432860;432861;432862;432863;432864;432865;432866;432867;432868 342070;342071;342072;342073;342074;342075;342076;342077;342078 342071 9 TGSGSPFAGNSPAR Unmodified 1304.6109 0.61092723 5059 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.651 30.841 2 5.2055E-05 32188 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 84.479 78.175 65421000 0 0 0 4257400 2946600 4660500 4207900 2619500 2486700 6533500 5531600 9519600 5824200 7161200 9672000 51605 5059 46329 432869;432870;432871;432872;432873;432874;432875;432876;432877;432878;432879;432880 342079;342080;342081;342082;342083;342084;342085;342086;342087;342088 342085 10 TGSGSPFAGNSPAREGEQDAASLK Unmodified 2333.0884 0.088380675 5059 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8 3.46 2 6 1 1 1 1 1 1 1 1 54.237 52.947 3 0.00028467 59889 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 34.65 25.604 70659000 0 29909000 7254300 4910000 3756400 0 4558200 3678900 5123900 11468000 0 0 0 0 0 51606 5059 46330 432881;432882;432883;432884;432885;432886;432887;432888 342089;342090;342091;342092;342093;342094;342095 342093 7 TGSHSEPQARGDPGDQTK Unmodified 1866.8456 0.84563121 4762 Q9NZB2 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 6.9234 4.7059 3 7.6265E-05 6537 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 59.372 53.732 12253000 0 0 12253000 0 0 0 0 0 0 0 0 0 0 0 0 51607 4762 46331 432889 342096 342096 1 TGSISSSVSVPAKPER Unmodified 1600.842 0.84204938 2960 Q6PJT7 ZC3H14 Zinc finger CCCH domain-containing protein 14 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 40.687 40.515 3 0.042429 45769 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 25.44 20.385 14795000 0 0 0 6813400 0 0 0 0 0 7981600 0 0 0 0 0 51608 2960 46332 432890;432891 342097;342098 342098 2 TGSLKPNPASPLPASPYGGPTPASYTTASTPAGPAFPVQVK Unmodified 3979.0367 0.036733027 2563 Q15654 TRIP6 Thyroid receptor-interacting protein 6 yes yes 0 0 1 By MS/MS By MS/MS 10 0 3 1 2 84.68 84.833 3;4 4.2831E-34 97993 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.601 52.197 38411000 0 0 0 0 0 0 0 0 0 8720600 0 0 0 0 29690000 51609 2563 46333 432892;432893;432894 342099;342100;342101 342101 3 TGSLLNQPK Unmodified 956.5291 0.52909508 4492 Q9HAW4 CLSPN Claspin yes yes 0 0 0 By MS/MS 10 0 1 1 28.615 28.617 2 0.0083402 30811 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 69.905 4.7485 26782000 0 0 0 0 0 26782000 0 0 0 0 0 0 0 0 0 51610 4492 46334 432895 342102 342102 1 TGSLQLICK Unmodified 1018.5481 0.54811597 3898 Q96JP5 ZFP91 E3 ubiquitin-protein ligase ZFP91 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.25 3.34 2 1 1 1 2 1 54.669 49.966 2 0.00089681 67762 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 143.89 108.27 146620000 32091000 61920000 0 0 0 52609000 0 0 0 0 0 0 0 0 0 51611 3898 46335 432896;432897;432898;432899 342103;342104;342105 342105 3 TGSLSDYSR Unmodified 984.45124 0.45123869 5130 Q9Y2Y9 KLF13 Krueppel-like factor 13 yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 22.663 22.873 2 0.029817 24226 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 48.423 33.754 62318000 0 0 0 4837600 3218000 4193000 4217700 4041800 3512400 0 7137400 11186000 6312600 6788600 6873200 51612 5130 46336 432900;432901;432902;432903;432904;432905;432906;432907;432908;432909;432910 342106;342107;342108 342108 3 TGSNEFK Unmodified 781.36063 0.36063277 355 O43684 BUB3 Mitotic checkpoint protein BUB3 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 8.0422 4.7392 2 0.043747 7047 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 143.94 64.49 558850000 0 558850000 0 0 0 0 0 0 0 0 0 0 0 0 0 51613 355 46337 432911;432912 342109 342109 0 TGSPGGPGVSGGSPAGGAGGGSSGLPPSTK Unmodified 2394.1411 0.14114453 5282 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes yes 0 0 0 By MS/MS 1 0 1 1 106.14 111.4 3 0.00023719 92041 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 35.122 33.283 19515000 19515000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51614 5282 46338 432913 342110 342110 1 TGSPGPELLFHEGQQK Unmodified 1723.8529 0.85294842 2390 Q14202 ZMYM3 Zinc finger MYM-type protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 65.956 64.653 3 9.9197E-17 85244 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.83 105.73 377150000 33710000 162430000 56412000 5361100 6407900 11222000 9163200 7484800 5467800 13132000 12135000 14116000 8781100 12541000 18786000 51615 2390 46339 432914;432915;432916;432917;432918;432919;432920;432921;432922;432923;432924;432925;432926;432927;432928;432929 342111;342112;342113;342114;342115;342116;342117;342118;342119;342120;342121;342122;342123;342124;342125;342126;342127;342128 342115 18 TGSPGSEVVTLQQFLEESNK Unmodified 2149.0539 0.053892649 2676 Q3V6T2 CCDC88A Girdin yes yes 0 0 0 By MS/MS 2 0 1 1 96.18 91.359 3 1.1036E-29 113201 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.335 77.961 21290000 0 21290000 0 0 0 0 0 0 0 0 0 0 0 0 0 51616 2676 46340 432930 342129 342129 1 TGSPGSPGAGGVQSTAK Unmodified 1457.711 0.71103521 306 O43237 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.94 3.58 1 3 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23.61 23.399 2 1.869E-13 17305 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 92.295 71.296 294790000 38915000 18293000 974160 16415000 13245000 19381000 16232000 14335000 13286000 19044000 18639000 35352000 19909000 19037000 31736000 51617 306 46341 432931;432932;432933;432934;432935;432936;432937;432938;432939;432940;432941;432942;432943;432944;432945;432946 342130;342131;342132;342133;342134;342135;342136;342137;342138;342139;342140;342141;342142;342143;342144 342142 15 TGSQGQCTQVR Unmodified 1220.5568 0.55678317 1919 P62857 RPS28 40S ribosomal protein S28 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.8751 6.9987 2 6.4209E-16 3947 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 163.64 95.658 116440000 0 0 0 6189800 9712200 8860600 7254200 7479100 7053800 6089600 13339000 9447100 12024000 9828900 19163000 51618 1919 46342 432947;432948;432949;432950;432951;432952;432953;432954;432955;432956;432957;432958 342145;342146;342147;342148;342149;342150;342151;342152;342153;342154 342151 10 TGSQYDIQDAIDK Unmodified 1452.6733 0.67325272 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 57.019 56.678 2 1.6336E-21 70863 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 172.13 151.82 502540000 0 48102000 0 68220000 29798000 30738000 38403000 48108000 23316000 28344000 44712000 48206000 35087000 25695000 33814000 51619 1029 46343 432959;432960;432961;432962;432963;432964;432965;432966;432967;432968;432969;432970;432971 342155;342156;342157;342158;342159;342160;342161;342162;342163;342164;342165;342166;342167;342168;342169 342159 15 TGSSQSSCCGQYGSGGSQSCSNGQHEYGSCGR Unmodified 3373.2473 0.247312 95 CON__Q5D862;Q5D862 FLG2 Filaggrin-2 yes no 0 0 0 By MS/MS 10 0 1 1 21.299 21.147 3 2.5015E-16 22065 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 50.492 50.492 + 6721500 0 0 0 6721500 0 0 0 0 0 0 0 0 0 0 0 51620 95 46344 432972 342170 342170 1 TGSVVQPSSGFSGTTDFIHLK Unmodified 2164.08 0.08004782 2561 Q15652 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 80.657 79.669 3 6.8902E-07 92305 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 64.5 49.245 70889000 25965000 0 4783800 0 1909300 4639400 3299900 0 4469400 7302700 4080100 0 0 4733900 9705300 51621 2561 46345 432973;432974;432975;432976;432977;432978;432979;432980;432981;432982;432983 342171;342172;342173;342174;342175;342176;342177;342178;342179;342180;342181 342171 10 TGSYGALAEITASK Unmodified 1367.6933 0.69325988 232 O14974 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 72.252 66.792 2 8.8553E-06 85311 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.89 81.018 142110000 12093000 127930000 2083700 0 0 0 0 0 0 0 0 0 0 0 0 51622 232 46346 432984;432985;432986;432987 342182;342183;342184 342182 3 TGSYIYEEFMPTDGTDVK Unmodified 2051.9034 0.90338859 317 O43314;Q6PFW1 PPIP5K2;PPIP5K1 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2;Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1 yes no 0 0 0 By MS/MS 2 0 1 1 87.654 82.845 2 1.2074E-52 102879 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 182.1 176.15 66205000 0 66205000 0 0 0 0 0 0 0 0 0 0 0 0 0 51623 317 46347 432988 342185 342185 1 TGTAEMSSILEER Unmodified 1422.6661 0.66605885 1192 P25705 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.335 66.42 2 2.8445E-13 76471 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 138.25 130.54 152950000 0 0 0 10864000 9197400 10049000 10349000 13095000 9421900 14054000 15844000 20890000 11295000 12100000 15794000 51624 1192 46348 432989;432990;432991;432992;432993;432994;432995;432996;432997;432998;432999;433000 342186;342187;342188;342189;342190;342191;342192;342193;342194;342195;342196;342197;342198 342198 13 TGTAEMSSILEER Oxidation (M) 1438.661 0.66097347 1192 P25705 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 42.302 42.495 2 3.2445E-08 47406 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 103.34 85.03 83698000 0 0 0 9781800 4945000 0 6881000 6186800 0 8087000 8056900 13157000 9700900 5626400 11276000 51625 1192 46348 433001;433002;433003;433004;433005;433006;433007;433008;433009;433010;433011 342199;342200;342201;342202;342203;342204;342205;342206;342207;342208;342209 342206 1725 11 TGTALHEAALYGK Unmodified 1330.6881 0.68811492 3588 Q8WXE0 CASKIN2 Caskin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 5 2 1 2 45.838 40.203 2;3 0.0051307 55731 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.448 35.782 67209000 28906000 16055000 22247000 0 0 0 0 0 0 0 0 0 0 0 0 51626 3588 46349 433012;433013;433014;433015;433016 342210;342211;342212;342213;342214 342212 3 TGTAQPGTQTCSTSTQSK Unmodified 1839.8269 0.8268696 4364 Q9H2F5 EPC1 Enhancer of polycomb homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 10.271 10.499 2 0.00030464 8301 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 77.593 71.748 25181000 0 0 0 0 0 2710400 0 0 0 2859900 3127800 4855100 2370200 4503800 4753800 51627 4364 46350 433017;433018;433019;433020;433021;433022;433023 342215;342216;342217;342218;342219 342217 5 TGTAYTFFTPNNIK Unmodified 1573.7777 0.77765821 1062 P17844 DDX5 Probable ATP-dependent RNA helicase DDX5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 79.455 78.331 2 3.4923E-100 90637 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 198.25 173.87 2362000000 435360000 573160000 14567000 65359000 63930000 99719000 88740000 100650000 85422000 151670000 110960000 140010000 111130000 109870000 211420000 51628 1062 46351 433024;433025;433026;433027;433028;433029;433030;433031;433032;433033;433034;433035;433036;433037;433038;433039 342220;342221;342222;342223;342224;342225;342226;342227;342228;342229;342230;342231;342232;342233;342234 342228 14 TGTCRISMSEVDLNVAAPK Oxidation (M) 2063.998 0.99797445 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 1 1 By MS/MS 2 0 1 1 67.688 59.394 3 0.00013207 79574 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.203 54.015 10167000 10167000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51629 2172 46352 433040 342235 342235 3523 1 TGTCRISMSEVDLNVAAPK Unmodified 2048.0031 0.0030598275 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 1 By MS/MS 2 0 1 1 78.744 70.614 3 1.7734E-13 92817 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.511 74.961 23448000 23448000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51630 2172 46352 433041 342236 342236 1 TGTDSNSTESSETSTGSLCK Unmodified 2047.8488 0.84878683 3327 Q8N3X1 FNBP4 Formin-binding protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 22.108 22.459 2 2.4921E-05 22625 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.607 46.627 22522000 0 0 0 0 0 0 2249400 2970100 0 2245500 2597700 4036800 2984700 2682600 2755400 51631 3327 46353 433042;433043;433044;433045;433046;433047;433048;433049;433050 342237;342238;342239 342237 3 TGTELVLLTAAPPPPPRPGPCAYAAHGR Unmodified 2866.4912 0.49121679 3750 Q96B36 AKT1S1 Proline-rich AKT1 substrate 1 yes yes 0 0 1 By MS/MS 10 0 1 1 79.063 79.309 4 1.1729E-10 91254 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.546 38.97 11700000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11700000 51632 3750 46354 433051 342240 342240 1 TGTGTLSVFGMQAR Oxidation (M) 1440.7031 0.70311306 787 P04818 TYMS Thymidylate synthase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching 10 0 8 1 1 1 1 1 1 1 1 62.31 62.374 2 0.00023446 71108 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 76.143 66.189 58526000 0 0 0 3431400 3538700 6050500 0 4326700 0 6531300 10269000 10563000 0 0 13817000 51633 787 46355 433052;433053;433054;433055;433056;433057;433058;433059 342241;342242;342243;342244;342245 342242 953 5 TGTIALSEVENIHQK Unmodified 1638.8577 0.85769944 2859 Q68DQ2 CRYBG3 Very large A-kinase anchor protein yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 67.737 62.911 3 9.4162E-08 77811 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 103.21 78.493 37098000 0 26989000 10109000 0 0 0 0 0 0 0 0 0 0 0 0 51634 2859 46356 433060;433061 342246 342246 0 TGTITTFEHAHNMR Unmodified 1614.7573 0.75727389 980 P13639 EEF2 Elongation factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.24 3.19 4 4 26 4 4 2 2 2 2 2 2 2 2 2 2 3 3 39.345 38.12 2;3;4 2.6302E-24 56329 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 131.26 122.66 2175500000 286050000 226300000 0 47944000 19688000 49550000 36191000 57468000 38312000 71773000 126730000 166170000 62901000 144020000 842380000 51635 980 46357 433062;433063;433064;433065;433066;433067;433068;433069;433070;433071;433072;433073;433074;433075;433076;433077;433078;433079;433080;433081;433082;433083;433084;433085;433086;433087;433088;433089;433090;433091;433092;433093;433094;433095 342247;342248;342249;342250;342251;342252;342253;342254;342255;342256;342257;342258;342259;342260;342261;342262;342263;342264;342265;342266;342267;342268;342269 342258 13 TGTITTFEHAHNMR Oxidation (M) 1630.7522 0.75218852 980 P13639 EEF2 Elongation factor 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 5 10 2 2 1 1 1 1 1 1 1 1 1 1 1 30.57 28.961 2;3 4.6679E-12 29326 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.592 93.298 832370000 238830000 114630000 26091000 23511000 16896000 26382000 29942000 31517000 0 33058000 0 58217000 46273000 79640000 107390000 51636 980 46357 433096;433097;433098;433099;433100;433101;433102;433103;433104;433105;433106;433107;433108;433109;433110 342270;342271;342272;342273;342274;342275;342276;342277;342278;342279;342280;342281 342273 1317 5 TGTIVVEGHELHDEDIR Unmodified 1918.9385 0.93846896 1441 P41252 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 2 2 2 1 2 2 2 2 53.536 53.854 3;4 9.0589E-08 60118 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.506 68.223 444440000 0 0 0 0 0 70204000 0 0 35737000 40718000 26329000 85280000 41487000 42346000 102340000 51637 1441 46358 433111;433112;433113;433114;433115;433116;433117;433118;433119;433120;433121;433122;433123;433124;433125 342282;342283;342284;342285;342286;342287;342288;342289;342290;342291;342292;342293 342286 10 TGTLGSLEEPAGGASVSAGSR Unmodified 1902.9283 0.9282982 1985 P78524 ST5 Suppression of tumorigenicity 5 protein yes yes 0 0 0 By MS/MS 10 0 1 1 58.037 58.145 2 0.0059425 66345 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 30.998 25.156 3038500 0 0 0 0 0 0 3038500 0 0 0 0 0 0 0 0 51638 1985 46359 433126 342294 342294 1 TGTLHEACEQLLK Unmodified 1498.745 0.74497787 3890 Q96JB2 COG3 Conserved oligomeric Golgi complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 4 1 1 2 57.737 52.278 2;3 6.5714E-05 64910 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 84.892 70.634 86890000 8334200 61501000 17054000 0 0 0 0 0 0 0 0 0 0 0 0 51639 3890 46360 433127;433128;433129;433130 342295;342296;342297;342298 342298 4 TGTLQPWNSDSTLNSR Unmodified 1775.8438 0.84384029 4329 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.265 62.362 2 2.2686E-31 71069 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 178.32 154.03 235160000 0 0 0 10850000 15145000 17404000 15051000 16386000 12865000 21555000 22322000 35521000 17325000 18016000 32718000 51640 4329 46361 433131;433132;433133;433134;433135;433136;433137;433138;433139;433140;433141;433142 342299;342300;342301;342302;342303;342304;342305;342306;342307;342308;342309;342310 342308 12 TGTLTTNQMSVCR Unmodified 1467.681 0.68099741 1041 P16615;Q93084 ATP2A2;ATP2A3 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 yes no 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 41.497 41.004 2 0.013945 46137 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 41.109 19.737 3099500 0 0 0 0 3099500 0 0 0 0 0 0 0 0 0 0 51641 1041 46362 433143;433144 342311;342312 342312 2 TGTPTVSSNSHSHSEK Unmodified 1654.7547 0.75469094 3492 Q8TCU4 ALMS1 Alstrom syndrome protein 1 yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 7.5249 4.6586 3 0.001105 6565 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 58.246 51.188 16724000 12920000 0 3803900 0 0 0 0 0 0 0 0 0 0 0 0 51642 3492 46363 433145;433146 342313;342314 342313 2 TGTQEVGGQDPGEAVQPCRQPLGAR Unmodified 2607.246 0.24596072 4782 Q9NZT2 OGFR Opioid growth factor receptor yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 48.18 48.624 3 2.7635E-41 54038 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 101.71 94.832 34740000 0 0 0 0 0 0 0 0 0 5280900 10135000 0 0 0 19324000 51643 4782 46364 433147;433148;433149;433150 342315;342316;342317;342318 342316 4 TGTQYLLR Unmodified 950.51853 0.5185304 1344;1623 P35237;P50452 SERPINB6;SERPINB8 Serpin B6;Serpin B8 no no 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.825 43 2 0.0097801 48119 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 81.784 37.337 274600000 0 0 0 20762000 7447500 11139000 11689000 12799000 9098900 12170000 43485000 35667000 17452000 21316000 71576000 51644 1344;1623 46365 433151;433152;433153;433154;433155;433156;433157;433158;433159;433160;433161;433162 342319;342320;342321;342322 342321 4 TGTSCALDCGAGIGRITK Unmodified 1836.8822 0.88221641 4180 Q9BV86 NTMT1 N-terminal Xaa-Pro-Lys N-methyltransferase 1;N-terminal Xaa-Pro-Lys N-methyltransferase 1, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 59.368 52.823 2;3 0.00010579 71299 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.552 73.013 204770000 150210000 35742000 18817000 0 0 0 0 0 0 0 0 0 0 0 0 51645 4180 46366 433163;433164;433165;433166 342323;342324;342325 342324 3 TGTTIAGVVYK Unmodified 1108.6128 0.61282471 4007 Q99436 PSMB7 Proteasome subunit beta type-7 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 58.257 51.233 2 0.022395 69473 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.59 34.27 71341000 6475800 64865000 0 0 0 0 0 0 0 0 0 0 0 0 0 51646 4007 46367 433167;433168 342326;342327 342327 1 TGTTRIGDLAPQDMK Unmodified 1602.8036 0.80355538 3319 Q8N392 ARHGAP18 Rho GTPase-activating protein 18 yes yes 0 0 1 By MS/MS 2 0 1 1 55.418 51.541 3 0.015638 64428 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 39.685 27.058 4830500 0 0 4830500 0 0 0 0 0 0 0 0 0 0 0 0 51647 3319 46368 433169 342328 342328 1 TGTVSLEVR Unmodified 960.52401 0.52400971 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42.035 40.995 2 0.0025264 44614 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 138.54 81.264 1528800000 5761600 383490000 4445300 45268000 39638000 128920000 57016000 63406000 0 109940000 125440000 135150000 77349000 101580000 251400000 51648 1565 46369 433170;433171;433172;433173;433174;433175;433176;433177;433178;433179;433180;433181;433182;433183 342329;342330;342331;342332;342333;342334;342335;342336;342337;342338;342339;342340;342341 342333 11 TGVAGEDMQDNSGTYGK Unmodified 1728.7261 0.72609292 2116 Q05655 PRKCD Protein kinase C delta type;Protein kinase C delta type regulatory subunit;Protein kinase C delta type catalytic subunit yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 32.434 32.628 2 1.4044E-06 35570 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 96.306 90.461 24126000 0 0 0 0 1119700 2465700 2936800 0 1279100 2660100 4555300 0 1819600 2083900 5205800 51649 2116 46370 433184;433185;433186;433187;433188;433189;433190;433191;433192 342342;342343;342344;342345;342346 342345 5 TGVAPDVFAENMK Unmodified 1377.6599 0.65985126 2057 Q01581 HMGCS1 Hydroxymethylglutaryl-CoA synthase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 70.725 70.788 2 0.00056132 80642 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.855 79.228 48139000 0 0 0 3029500 3476600 3755400 1644300 3029700 0 2234300 4897300 5104800 2645200 4231900 14091000 51650 2057 46371 433193;433194;433195;433196;433197;433198;433199;433200;433201;433202;433203 342347;342348;342349;342350;342351;342352;342353;342354 342349 8 TGVAPDVFAENMK Oxidation (M) 1393.6548 0.65476588 2057 Q01581 HMGCS1 Hydroxymethylglutaryl-CoA synthase, cytoplasmic yes yes 0 1 0 By MS/MS 2 0 1 1 62.916 57.023 2 0.0018239 73212 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.171 61.59 32171000 0 32171000 0 0 0 0 0 0 0 0 0 0 0 0 0 51651 2057 46371 433204 342355 342355 3344 1 TGVAVNKPAEFTVDAK Unmodified 1645.8675 0.86753585 1124 P21333 FLNA Filamin-A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.86 3.47 6 2 21 2 4 2 1 2 2 2 2 1 2 2 2 2 1 2 54.429 52.987 2;3 2.2276E-11 59242 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 97.579 87.094 1508200000 114840000 690840000 96073000 45267000 37963000 25871000 56399000 41642000 14537000 49845000 71946000 78803000 31231000 41408000 111510000 51652 1124 46372 433205;433206;433207;433208;433209;433210;433211;433212;433213;433214;433215;433216;433217;433218;433219;433220;433221;433222;433223;433224;433225;433226;433227;433228;433229;433230;433231;433232;433233 342356;342357;342358;342359;342360;342361;342362;342363;342364;342365;342366;342367;342368;342369;342370;342371;342372;342373;342374;342375;342376;342377;342378;342379;342380 342377 22 TGVELGKPTHFTVNAK Unmodified 1697.9101 0.91006937 1124 P21333 FLNA Filamin-A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 2 3 2 2 1 2 2 2 2 1 2 48.998 49.185 3;4 1.7975E-36 54206 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 136.57 129.1 1340400000 0 0 0 34676000 46771000 60690000 90520000 68148000 48134000 121060000 131490000 242500000 95348000 37438000 363670000 51653 1124 46373 433234;433235;433236;433237;433238;433239;433240;433241;433242;433243;433244;433245;433246;433247;433248;433249;433250;433251;433252;433253;433254;433255 342381;342382;342383;342384;342385;342386;342387;342388;342389;342390;342391;342392;342393;342394;342395;342396;342397;342398;342399;342400;342401;342402;342403 342387 18 TGVGYPQLSAVMECADAAHGLK Unmodified 2274.0773 0.077287403 4828 Q9P2T1 GMPR2 GMP reductase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 88.537 83.391 3 0.00080943 105649 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.106 36.803 101320000 12656000 85364000 3297800 0 0 0 0 0 0 0 0 0 0 0 0 51654 4828 46374 433256;433257;433258 342404;342405;342406 342406 3 TGVHHYSGNNIELGTACGK Unmodified 2013.9327 0.93267208 1924 P62888 RPL30 60S ribosomal protein L30 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.66 2.95 4 1 24 2 1 2 2 2 2 2 2 2 2 2 2 2 2 2 35.621 34.902 3;4 4.0164E-53 49304 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 123.14 108.18 1102700000 680380000 2506900 41725000 9395700 4177000 22199000 9055900 8681200 10856000 15249000 77408000 86678000 46030000 38707000 49662000 51655 1924 46375 433259;433260;433261;433262;433263;433264;433265;433266;433267;433268;433269;433270;433271;433272;433273;433274;433275;433276;433277;433278;433279;433280;433281;433282;433283;433284;433285;433286;433287 342407;342408;342409;342410;342411;342412;342413;342414;342415;342416;342417;342418;342419;342420;342421;342422;342423;342424 342413 17 TGVIEHEHPVNK Unmodified 1358.6943 0.69426293 2021 P98082 DAB2 Disabled homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.39 5 2 20 3 3 1 2 1 1 2 2 1 2 1 2 2 2 2 14.352 13.502 2;3 6.3321E-05 17661 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 107.03 92.846 1714500000 814070000 140340000 175590000 27106000 1825800 2179000 49891000 39475000 1783200 112780000 3372800 85728000 51024000 56795000 152530000 51656 2021 46376 433288;433289;433290;433291;433292;433293;433294;433295;433296;433297;433298;433299;433300;433301;433302;433303;433304;433305;433306;433307;433308;433309;433310;433311;433312;433313;433314 342425;342426;342427;342428;342429;342430;342431;342432;342433;342434;342435;342436;342437;342438;342439;342440;342441;342442;342443;342444;342445;342446 342434 19 TGVIGVQPEEVTAAAK Unmodified 1568.841 0.84098675 3893 Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.134 65.221 2 3.1343E-06 73996 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 102.62 79.476 89798000 0 0 0 5092200 4776200 6151700 8361900 6542700 5341400 7815700 9008700 11349000 7014300 6534800 11809000 51657 3893 46377 433315;433316;433317;433318;433319;433320;433321;433322;433323;433324;433325;433326 342447;342448;342449;342450;342451;342452;342453;342454;342455;342456;342457;342458 342451 12 TGVKPDASDQEPEGLTLLVPDIQK Unmodified 2549.3225 0.32246294 4584 Q9NR09 BIRC6 Baculoviral IAP repeat-containing protein 6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.71 3.81 2 1 4 2 1 2 1 1 87.243 85.552 3 3.8943E-08 98547 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.952 57.026 82962000 0 63515000 2802400 0 0 5065300 0 0 0 0 3087500 0 0 0 8492500 51658 4584 46378 433327;433328;433329;433330;433331;433332;433333 342459;342460;342461;342462;342463;342464;342465;342466 342463 8 TGVLNENTVSAGK Unmodified 1288.6623 0.6622941 3418 Q8NDI1 EHBP1 EH domain-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 36.101 36.34 2 0.00049363 38832 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.07 40.294 86255000 0 0 0 5056400 0 7613100 8437100 6466500 5349500 7727800 7874600 12485000 6989600 6558300 11697000 51659 3418 46379 433334;433335;433336;433337;433338;433339;433340;433341;433342;433343;433344 342467;342468;342469;342470;342471;342472;342473;342474;342475;342476;342477 342470 7 TGVQFTTK Unmodified 880.46543 0.46543219 1419 P40763 STAT3 Signal transducer and activator of transcription 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.45 3.89 4 1 6 1 3 1 1 1 1 1 1 1 29.801 27.942 1;2 0.012119 35965 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.6 43.433 670210000 22500000 597110000 7748500 0 0 0 0 2049900 0 6602600 0 5856900 6472800 3764300 18103000 51660 1419 46380 433345;433346;433347;433348;433349;433350;433351;433352;433353;433354;433355 342478;342479;342480;342481;342482;342483 342479 5 TGVSPGDVSDSATSDSTK Unmodified 1709.7592 0.75916719 2776 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.802 31.988 2 1.468E-29 34675 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 113.35 104.83 123850000 0 0 0 7028500 7949400 11117000 10354000 7166800 7766300 12414000 17013000 13976000 7244500 7397700 14420000 51661 2776 46381 433356;433357;433358;433359;433360;433361;433362;433363;433364;433365;433366;433367 342484;342485;342486;342487;342488;342489;342490;342491;342492;342493;342494;342495;342496 342489 13 TGVSQLSTALK Unmodified 1103.6186 0.61863837 2573 Q15751 HERC1 Probable E3 ubiquitin-protein ligase HERC1 yes yes 0 0 0 By MS/MS 2 0 1 1 59.087 53.244 2 0.0062567 68509 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.275 26.535 49528000 0 49528000 0 0 0 0 0 0 0 0 0 0 0 0 0 51662 2573 46382 433368 342497 342497 1 TGVSTVTSTSYSHREK Unmodified 1738.8486 0.84859132 3492 Q8TCU4 ALMS1 Alstrom syndrome protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 28.376 22.857 3 0.0040387 32305 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.83 51.12 8966800 8966800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51663 3492 46383 433369 342498 342498 1 TGVVPQLVK Unmodified 939.57532 0.57531699 1682 P52292 KPNA2 Importin subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 58.578 57.25 2 0.0027845 63846 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 127.12 80.747 2607600000 191210000 1608100000 30624000 47778000 52828000 67302000 53429000 62438000 39810000 65333000 74658000 88277000 71725000 61532000 92525000 51664 1682 46384 433370;433371;433372;433373;433374;433375;433376;433377;433378;433379;433380;433381;433382;433383;433384;433385 342499;342500;342501;342502;342503;342504;342505;342506;342507;342508;342509;342510;342511;342512;342513;342514;342515;342516 342511 13 TGWFPANYAEK Unmodified 1282.5982 0.59823728 2581 Q15811;CON__ENSEMBL:ENSBTAP00000001528 ITSN1 Intersectin-1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 76.249 70.942 2 0.02 89600 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.325 35.565 + 52864000 25039000 26191000 1634000 0 0 0 0 0 0 0 0 0 0 0 0 51665 2581 46385 433386;433387;433388 342517;342518;342519 342517 3 TGYGELNGNAGEREISLK Unmodified 1906.9385 0.93846896 3091 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 56.498 56.227 3 0.0018108 63202 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.257 35.792 45034000 0 0 5342300 0 3644700 3038100 3499000 3184400 2614400 7992700 0 5616000 0 0 10103000 51666 3091 46386 433389;433390;433391;433392;433393;433394;433395;433396;433397 342520;342521 342520 2 TGYGGGFNER Unmodified 1056.4625 0.46247208 627 O95218 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 27.358 27.643 2 0.023694 28599 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.368 24.848 97753000 0 0 0 6470300 0 0 0 0 8285700 0 20723000 0 16078000 19979000 26217000 51667 627 46387 433398;433399;433400;433401;433402;433403 342522;342523 342522 2 TGYSANIIFHTK Unmodified 1350.6932 0.6932003 3995 Q96SU4 OSBPL9 Oxysterol-binding protein-related protein 9 yes yes 0 0 0 By MS/MS 2 0 1 1 71.725 63.486 3 8.9832E-05 84295 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.082 64.95 30659000 30659000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51668 3995 46388 433404 342524 342524 1 TGYSMVQENGQR Unmodified 1368.6092 0.60921267 2 A0AV96 RBM47 RNA-binding protein 47 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 30.15 30.443 2 2.5003E-05 31891 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 121.41 102.43 69232000 0 0 0 4599800 0 0 0 6770300 4680900 5832000 6668500 11067000 7224900 7253600 15135000 51669 2 46389 433405;433406;433407;433408;433409;433410;433411;433412;433413;433414 342525;342526;342527;342528;342529;342530;342531;342532 342527 8 TGYSMVQENGQR Oxidation (M) 1384.6041 0.60412729 2 A0AV96 RBM47 RNA-binding protein 47 yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 16.821 17.156 2 0.0020787 16745 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 61.161 44.959 5669300 0 0 0 0 0 0 0 0 2755100 0 0 2914200 0 0 0 51670 2 46389 433415;433416 342533 342533 3 1 TGYSMVQENGQRK Unmodified 1496.7042 0.70417569 2 A0AV96 RBM47 RNA-binding protein 47 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.951 22.157 3 4.638E-09 22548 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 92.781 82.729 210480000 0 0 0 12108000 7234600 14262000 19014000 19420000 15662000 26524000 21692000 17429000 15824000 16699000 24612000 51671 2 46390 433417;433418;433419;433420;433421;433422;433423;433424;433425;433426;433427;433428 342534;342535;342536;342537;342538;342539;342540;342541;342542 342540 8 TGYTLDVTTGQR Unmodified 1310.6466 0.64664404 322;407 O43390;O60506 HNRNPR;SYNCRIP Heterogeneous nuclear ribonucleoprotein R;Heterogeneous nuclear ribonucleoprotein Q no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 50.354 50.614 2 2.5316E-05 56085 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.88 74.436 230650000 0 0 0 16989000 0 0 0 17100000 0 24584000 35128000 35148000 34683000 27146000 39874000 51672 322;407 46391 433429;433430;433431;433432;433433;433434;433435;433436;433437;433438 342543;342544;342545;342546;342547;342548;342549;342550;342551 342545 9 TGYTLDVTTGQRK Unmodified 1438.7416 0.74160705 322;407 O43390;O60506 HNRNPR;SYNCRIP Heterogeneous nuclear ribonucleoprotein R;Heterogeneous nuclear ribonucleoprotein Q no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 1 2 2 2 2 2 2 2 40.565 40.744 2;3 0.00023928 44047 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.208 49.658 396270000 0 0 0 27842000 20513000 29194000 32062000 20671000 27530000 26192000 38478000 50797000 41739000 31705000 49550000 51673 322;407 46392 433439;433440;433441;433442;433443;433444;433445;433446;433447;433448;433449;433450;433451;433452;433453;433454;433455;433456;433457;433458;433459;433460;433461 342552;342553;342554;342555;342556;342557;342558;342559;342560;342561;342562;342563;342564;342565;342566;342567;342568;342569;342570;342571 342557 19 THAEDLNSGPLHR Unmodified 1445.7011 0.70113922 1040 P16591 FER Tyrosine-protein kinase Fer yes yes 0 0 0 By MS/MS 10 0 1 1 25.719 26.198 3 0.012292 27686 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 37.998 29.269 4542000 0 0 0 0 0 0 0 0 0 0 4542000 0 0 0 0 51674 1040 46393 433462 342572 342572 1 THAVLVALK Unmodified 950.5913 0.59130141 1193 P25786 PSMA1 Proteasome subunit alpha type-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 2 1 2 1 1 1 1 1 1 1 1 1 1 1 1 45.564 44.141 2 0.00086975 65472 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 144.38 96.527 1016900000 384990000 8298100 137030000 24749000 8602900 26159000 18227000 27163000 18220000 24624000 64717000 79556000 24513000 35785000 134280000 51675 1193 46394 433463;433464;433465;433466;433467;433468;433469;433470;433471;433472;433473;433474;433475;433476;433477;433478;433479 342573;342574;342575;342576;342577;342578;342579;342580;342581;342582;342583;342584;342585;342586;342587;342588;342589;342590;342591 342582 19 THDHQLESSLSPVEVFAK Unmodified 2023.0011 0.0010692176 4388 Q9H410 DSN1 Kinetochore-associated protein DSN1 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 81.493 73.362 3 0.021979 96169 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 27.224 17.302 5061200 5061200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51676 4388 46395 433480 342592 342592 1 THEAEIVEGENHTYCIR Unmodified 2056.9273 0.92725235 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8 3.46 2 6 2 1 1 1 1 1 1 46.714 46.02 3;4 4.0434E-36 50362 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 124.91 108.6 89438000 0 0 13019000 0 0 9835300 0 0 4355500 0 0 14872000 10943000 11932000 24481000 51677 1124 46396 433481;433482;433483;433484;433485;433486;433487;433488 342593;342594;342595;342596;342597;342598;342599;342600 342594 8 THEAQIQEMR Oxidation (M) 1257.5772 0.57718426 1356 P35579 MYH9 Myosin-9 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.36 2.17 2 23 1 1 2 2 2 2 2 2 1 2 2 2 2 2 9.5727 9.4733 2;3 0.00021996 7933 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 130.41 117.79 2514800000 0 8400100 6301300 235400000 224160000 203880000 257860000 129200000 140510000 33668000 328770000 403120000 225370000 134390000 183720000 51678 1356 46397 433489;433490;433491;433492;433493;433494;433495;433496;433497;433498;433499;433500;433501;433502;433503;433504;433505;433506;433507;433508;433509;433510;433511;433512;433513 342601;342602;342603;342604;342605;342606;342607;342608;342609;342610;342611;342612;342613;342614;342615;342616;342617;342618;342619;342620;342621;342622;342623 342619 2098 14 THEAQIQEMR Unmodified 1241.5823 0.58226964 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 2 22 1 1 2 2 2 2 2 2 2 1 1 2 2 2 20.592 20.449 2;3 7.8414E-142 21290 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 227.27 210.03 5970000000 0 17795000 30596000 422760000 479330000 624050000 556090000 285180000 367190000 542300000 532250000 441180000 696880000 485300000 489070000 51679 1356 46397 433514;433515;433516;433517;433518;433519;433520;433521;433522;433523;433524;433525;433526;433527;433528;433529;433530;433531;433532;433533;433534;433535;433536;433537 342624;342625;342626;342627;342628;342629;342630;342631;342632;342633;342634;342635;342636;342637;342638;342639;342640;342641;342642;342643;342644;342645;342646;342647;342648;342649;342650;342651 342625 22 THEAQIQEMRQK Unmodified 1497.7358 0.73581017 1356 P35579 MYH9 Myosin-9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 6 2 2 2 20.773 17.037 2;3 1.9665E-24 22795 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 171.49 155.35 1525800000 1362900000 93263000 69647000 0 0 0 0 0 0 0 0 0 0 0 0 51680 1356 46398 433538;433539;433540;433541;433542;433543 342652;342653;342654;342655;342656;342657;342658 342652 6 THEAQIQEMRQK Oxidation (M) 1513.7307 0.73072479 1356 P35579 MYH9 Myosin-9 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 6.82 3.81 5 2 10 4 2 1 1 1 1 1 1 1 1 1 1 1 8.2813 6.9101 3 1.3525E-14 6938 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 140 136.21 926480000 680670000 51865000 161090000 1598100 0 1593700 3307400 2415800 8877200 2531100 3602000 0 2673700 3142400 3107600 51681 1356 46398 433544;433545;433546;433547;433548;433549;433550;433551;433552;433553;433554;433555;433556;433557;433558;433559;433560 342659;342660;342661;342662;342663;342664;342665;342666;342667;342668 342668 2098 7 THEDIEAQIR Unmodified 1210.5942 0.59421454 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 1 2 2 2 30.876 31.042 2;3 1.2876E-05 32329 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 174.92 152.42 796290000 0 0 0 29990000 33096000 68544000 43733000 46492000 41501000 69265000 83560000 70273000 106090000 90834000 112920000 51682 516 46399 433561;433562;433563;433564;433565;433566;433567;433568;433569;433570;433571;433572;433573;433574;433575;433576;433577;433578;433579;433580;433581;433582;433583 342669;342670;342671;342672;342673;342674;342675;342676;342677;342678;342679;342680;342681;342682;342683 342674 14 THEDIEAQIREIQGK Unmodified 1765.8959 0.89587586 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.8 3.92 6 9 2 2 2 1 1 1 1 1 1 1 1 1 61.722 59.487 3;4 6.8774E-23 79896 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 121.92 112.88 367660000 84943000 128400000 43198000 0 0 7734100 0 7945700 7559700 5796900 12989000 11663000 8311000 17338000 31787000 51683 516 46400 433584;433585;433586;433587;433588;433589;433590;433591;433592;433593;433594;433595;433596;433597;433598 342684;342685;342686;342687;342688;342689;342690;342691;342692;342693;342694;342695;342696;342697;342698 342690 14 THEMEPAEAIETPLLPHQK Unmodified 2170.0729 0.072853952 2411 Q14527 HLTF Helicase-like transcription factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.12 3 13 1 2 1 1 1 1 1 1 1 1 2 3 72.974 72.508 3;4 2.6106E-08 82466 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.545 71.015 206970000 0 24771000 26223000 0 0 5960800 2969800 15312000 5739900 8197000 12654000 9169200 6305900 18849000 70818000 51684 2411 46401 433599;433600;433601;433602;433603;433604;433605;433606;433607;433608;433609;433610;433611;433612;433613;433614 342699;342700;342701;342702;342703;342704;342705;342706;342707;342708;342709;342710;342711;342712;342713;342714 342704 13 THEMEPAEAIETPLLPHQK Oxidation (M) 2186.0678 0.067768574 2411 Q14527 HLTF Helicase-like transcription factor yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 2 16 1 1 2 1 2 2 2 2 1 2 1 1 65.081 64.526 3;4 2.1079E-39 73256 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 117.18 113.68 544520000 9666400 0 20615000 34643000 0 39913000 37205000 45576000 59806000 65996000 43825000 112650000 0 26725000 47910000 51685 2411 46401 433615;433616;433617;433618;433619;433620;433621;433622;433623;433624;433625;433626;433627;433628;433629;433630;433631;433632 342715;342716;342717;342718;342719;342720;342721;342722;342723;342724;342725;342726;342727;342728;342729;342730;342731;342732;342733 342721 3963 13 THETLSHAGQK Unmodified 1207.5945 0.59454889 2642 Q16890 TPD52L1 Tumor protein D53 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 6 2 24 3 3 2 2 2 2 2 3 2 1 2 2 2 2 2 5.8405 5.1525 2;3 1.0079E-55 6197 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 215.93 187.22 3836300000 2370700000 405830000 689070000 28628000 36878000 28170000 33850000 46241000 32293000 3095500 29701000 38196000 34595000 21197000 37849000 51686 2642 46402 433633;433634;433635;433636;433637;433638;433639;433640;433641;433642;433643;433644;433645;433646;433647;433648;433649;433650;433651;433652;433653;433654;433655;433656;433657;433658;433659;433660;433661;433662;433663;433664 342734;342735;342736;342737;342738;342739;342740;342741;342742;342743;342744;342745;342746;342747;342748;342749;342750;342751;342752 342744 15 THFEYEK Unmodified 952.42905 0.42904669 2136 Q07157 TJP1 Tight junction protein ZO-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 16.68 16.861 2 0.046071 15364 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 66.073 43.942 44810000 0 0 0 2485200 3020200 3770300 4107800 2268200 0 5251800 5225400 4629100 5310400 3470900 5270700 51687 2136 46403 433665;433666;433667;433668;433669;433670;433671;433672;433673;433674;433675 342753 342753 1 THGQSQSINCNTCK Unmodified 1633.6937 0.69368736 2368 Q14119 VEZF1 Vascular endothelial zinc finger 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 8.6525 5.5669 3 0.00024746 9734 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.316 63.031 38446000 26806000 7754200 3885800 0 0 0 0 0 0 0 0 0 0 0 0 51688 2368 46404 433676;433677;433678 342754;342755;342756;342757 342756 4 THGSEYYECSRYK Unmodified 1678.7046 0.70456962 650 O95376 ARIH2 E3 ubiquitin-protein ligase ARIH2 yes yes 0 0 1 By MS/MS 2 0 1 1 26.898 21.509 3 5.8335E-11 30407 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 119.39 112.15 25482000 25482000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51689 650 46405 433679 342758;342759;342760 342759 3 THHNDTELIRK Unmodified 1362.7004 0.70041094 1612 P49915 GMPS GMP synthase [glutamine-hydrolyzing] yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 12.233 11.919 3 0.00095952 8900 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.179 53.313 109250000 37577000 0 0 0 0 7661600 0 1891300 4865900 6925800 1229700 21336000 0 0 27766000 51690 1612 46406 433680;433681;433682;433683;433684;433685;433686;433687 342761;342762;342763;342764;342765;342766 342763 4 THIDTVINALK Unmodified 1223.6874 0.68738664 689 O95782 AP2A1 AP-2 complex subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.54 3.69 4 9 2 1 1 1 1 1 1 1 1 1 1 1 67.99 66.23 2;3 0.00029188 74024 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.667 69.445 135030000 68097000 21573000 2389200 0 0 4992200 1744500 4369500 3375300 4302200 4958200 5069600 0 4415500 9741600 51691 689 46407 433688;433689;433690;433691;433692;433693;433694;433695;433696;433697;433698;433699;433700 342767;342768;342769;342770;342771;342772;342773;342774;342775;342776;342777 342771 9 THIDVIHYR Unmodified 1152.604 0.60399136 1332 P33991 MCM4 DNA replication licensing factor MCM4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 37.415 37.917 3 0.0052625 40729 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.1 57.484 88121000 0 0 0 0 0 22080000 0 0 0 0 0 20736000 0 0 45305000 51692 1332 46408 433701;433702;433703 342778;342779 342778 2 THIDVIHYRK Unmodified 1280.699 0.69895438 1332 P33991 MCM4 DNA replication licensing factor MCM4 yes yes 0 0 1 By MS/MS 10 0 1 1 28.592 29.288 3 0.011457 30643 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.885 30.51 16759000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16759000 51693 1332 46409 433704 342780 342780 1 THIEQIQK Unmodified 995.53999 0.53999412 4030 Q99590 SCAF11 Protein SCAF11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14.246 13.628 2 0.0058845 12911 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 105.14 49.014 182990000 22633000 20030000 29585000 7309400 6633900 6316900 5852200 7294200 7135600 13831000 12724000 0 17216000 11931000 14502000 51694 4030 46410 433705;433706;433707;433708;433709;433710;433711;433712;433713;433714;433715;433716;433717;433718 342781;342782;342783;342784;342785;342786;342787;342788;342789;342790;342791;342792 342783 11 THIETVINALK Unmodified 1237.703 0.7030367 613 O94973 AP2A2 AP-2 complex subunit alpha-2 yes yes 0 0 0 By MS/MS 2 0 2 2 76.899 68.769 2;3 0.0015924 90661 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.681 79.034 7541000 7541000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51695 613 46411 433719;433720 342793;342794 342794 2 THILLFLPK Unmodified 1080.6696 0.66955173 838 P07237 P4HB Protein disulfide-isomerase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 79.734 79.887 2 0.0043999 92419 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 86.953 62.799 67568000 0 0 0 0 0 3352200 0 1933700 2538200 0 3559600 6111000 0 2926900 47147000 51696 838 46412 433721;433722;433723;433724;433725;433726;433727 342795;342796;342797;342798;342799;342800 342795 6 THINIVVIGHVDSGK Unmodified 1587.8733 0.87328993 1960 P68104;Q5VTE0;Q05639 EEF1A1;EEF1A1P5;EEF1A2 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS 2.23 0.516 1 15 6 10 10 2 73.113 69.28 3;4 1.973E-38 95665 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 136.57 130.85 293830000 101970000 182680000 9183500 0 0 0 0 0 0 0 0 0 0 0 0 51697 1960 46413 433728;433729;433730;433731;433732;433733;433734;433735;433736;433737;433738;433739;433740;433741;433742;433743;433744;433745;433746;433747;433748;433749 342801;342802;342803;342804;342805;342806;342807;342808;342809;342810;342811;342812;342813;342814;342815;342816;342817;342818;342819;342820;342821;342822 342813 20 THIQDNHDGTYTVAYVPDVTGR Unmodified 2458.1513 0.15131528 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 2 1 2 3 2 2 2 2 64.019 64.217 3;4 7.1733E-43 73413 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 106.73 99.113 261240000 0 0 0 3490900 0 25243000 0 0 0 26637000 26541000 44871000 15723000 27266000 91464000 51698 1124 46414 433750;433751;433752;433753;433754;433755;433756;433757;433758;433759;433760;433761;433762;433763;433764;433765;433766 342823;342824;342825;342826;342827;342828;342829;342830;342831;342832;342833;342834;342835;342836;342837;342838;342839 342824 17 THKPDPGTPQHTSSRPPEPQK Unmodified 2321.1513 0.1512557 4867 Q9UDY2 TJP2 Tight junction protein ZO-2 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 2 1 1 1 1 1 1 1 1 15.29 14.52 4;5 0.00066055 21625 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.229 39.728 138120000 91169000 0 0 5890900 0 5590900 0 3844900 0 7456800 0 5724500 5372700 4997400 8072100 51699 4867 46415 433767;433768;433769;433770;433771;433772;433773;433774;433775;433776 342840;342841;342842;342843 342840 4 THLEDERDNSEK Unmodified 1471.6539 0.65391426 1732 P54132 BLM Bloom syndrome protein yes yes 0 0 1 By MS/MS 2 0 1 1 6.8278 4.6103 3 0.00011317 6449 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 96.067 75.21 7677600 0 0 7677600 0 0 0 0 0 0 0 0 0 0 0 0 51700 1732 46416 433777 342844 342844 1 THLENNRFGGSGSQVDSAR Unmodified 2030.9518 0.95182761 2252 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 2 1 1 1 1 2 2 2 1 2 2 26.277 26.519 3;4 0.00066064 26589 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.09 33.049 171310000 0 0 0 4591100 12228000 7103300 4391000 3072900 3860500 34228000 39182000 35128000 4526700 8318000 14679000 51701 2252 46417 433778;433779;433780;433781;433782;433783;433784;433785;433786;433787;433788;433789;433790;433791;433792;433793;433794;433795 342845;342846;342847;342848;342849;342850;342851;342852;342853;342854;342855 342847 10 THLNFQEFR Unmodified 1190.5833 0.58325592 3315 Q8N201 INTS1 Integrator complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 54.273 54.391 3 0.030544 61928 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 36.424 24.211 10888000 0 0 0 0 0 3460500 2453000 3437600 0 1537400 0 0 0 0 0 51702 3315 46418 433796;433797;433798;433799 342856 342856 1 THLPDFLICK Unmodified 1242.6431 0.64307898 589 O94822 LTN1 E3 ubiquitin-protein ligase listerin yes yes 0 0 0 By MS/MS 2 0 1 1 83.473 75.343 3 0.014444 98486 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.49 34.67 8469700 8469700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51703 589 46419 433800 342857 342857 1 THLPGFVEQAEALK Unmodified 1538.8093 0.80929269 1263 P30044 PRDX5 Peroxiredoxin-5, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3.83 3.17 18 5 6 9 11 3 1 1 1 1 2 81.065 77.317 2;3 5.0052E-35 99385 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 128.54 109.3 7539700000 4104100000 2884500000 415100000 0 0 0 0 0 0 5354000 12580000 15623000 0 10583000 91946000 51704 1263 46420 433801;433802;433803;433804;433805;433806;433807;433808;433809;433810;433811;433812;433813;433814;433815;433816;433817;433818;433819;433820;433821;433822;433823;433824;433825;433826;433827;433828;433829 342858;342859;342860;342861;342862;342863;342864;342865;342866;342867;342868;342869;342870;342871;342872;342873;342874;342875;342876;342877;342878;342879;342880;342881;342882;342883;342884;342885;342886;342887;342888;342889;342890;342891;342892;342893;342894;342895;342896;342897;342898;342899 342883 39 THLSLSHNPEQK Unmodified 1389.7001 0.70007659 953 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.18 3.29 6 2 26 4 3 1 2 2 2 2 3 2 2 2 2 2 2 3 21.631 20.705 2;3 6.2042E-96 32159 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 240.82 214.81 3163100000 1975700000 259500000 115190000 35908000 41067000 80507000 53196000 65265000 70878000 75399000 57124000 100870000 52222000 54373000 125940000 51705 953 46421 433830;433831;433832;433833;433834;433835;433836;433837;433838;433839;433840;433841;433842;433843;433844;433845;433846;433847;433848;433849;433850;433851;433852;433853;433854;433855;433856;433857;433858;433859;433860;433861;433862;433863 342900;342901;342902;342903;342904;342905;342906;342907;342908;342909;342910;342911;342912;342913;342914;342915;342916;342917;342918;342919;342920;342921;342922;342923;342924;342925;342926;342927 342914 23 THLTEDTPK Unmodified 1040.5138 0.51383895 2569 Q15738 NSDHL Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 11.538 11.693 2 0.0044648 10841 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 86.744 71.129 34458000 0 0 0 16342000 0 0 0 0 0 0 18116000 0 0 0 0 51706 2569 46422 433864;433865 342928;342929;342930 342930 3 THLTSLK Unmodified 798.45995 0.45995289 2553 Q15631 TSN Translin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.71 5 11 1 2 2 1 1 1 1 1 1 1 1 1 1 1 15.824 14.881 2 0.022277 19570 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 107.59 71.408 2435200000 1427600000 443940000 395900000 7809200 5571800 12969000 8115400 7164400 0 15042000 22516000 19357000 11717000 17109000 40425000 51707 2553 46423 433866;433867;433868;433869;433870;433871;433872;433873;433874;433875;433876;433877;433878;433879;433880;433881 342931;342932;342933;342934;342935;342936;342937;342938 342936 6 THMVVANTMEDFQK 2 Oxidation (M) 1681.744 0.74399159 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7 3.87 6 10 2 2 2 1 1 1 1 1 1 2 1 1 32.809 30.731 2;3 1.9797E-23 40388 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.82 121.93 534830000 176540000 100860000 134400000 11648000 9915200 21765000 13392000 13012000 13463000 20903000 18929000 0 0 0 0 51708 848 46424 433882;433883;433884;433885;433886;433887;433888;433889;433890;433891;433892;433893;433894;433895;433896;433897 342939;342940;342941;342942;342943;342944;342945;342946;342947;342948;342949;342950;342951;342952;342953;342954 342943 1062;1063 16 THMVVANTMEDFQK Oxidation (M) 1665.7491 0.74907697 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 5.43 3.96 12 9 5 3 4 1 1 1 1 1 1 1 1 1 49.224 46.099 2;3 5.0737E-39 63320 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 163.46 149.38 1173000000 386640000 442020000 189090000 0 12558000 18416000 0 9903600 0 13724000 20980000 22381000 12860000 14593000 29840000 51709 848 46424 433898;433899;433900;433901;433902;433903;433904;433905;433906;433907;433908;433909;433910;433911;433912;433913;433914;433915;433916;433917;433918 342955;342956;342957;342958;342959;342960;342961;342962;342963;342964;342965;342966;342967;342968;342969;342970;342971;342972;342973;342974;342975;342976 342959 1062;1063 21 THMVVANTMEDFQK Unmodified 1649.7542 0.75416235 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.65 3.65 5 12 2 1 2 1 1 1 1 2 2 1 1 2 59.187 57.557 2;3 2.0832E-31 79038 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 124.3 118.83 1576200000 839550000 511990000 99698000 0 0 11752000 10435000 0 0 9486000 17667000 17331000 6615800 8932000 42784000 51710 848 46424 433919;433920;433921;433922;433923;433924;433925;433926;433927;433928;433929;433930;433931;433932;433933;433934;433935 342977;342978;342979;342980;342981;342982;342983;342984;342985;342986;342987;342988;342989;342990;342991;342992;342993;342994;342995 342984 17 THNEHLAGVLK Unmodified 1217.6517 0.65166983 1242 P29084 GTF2E2 Transcription initiation factor IIE subunit beta yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 26.045 26.314 3 0.018308 28704 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 31.597 5.6584 76674000 0 0 0 0 0 6140900 6517600 0 4358900 7585300 13714000 13340000 18380000 6637200 0 51711 1242 46425 433936;433937;433938;433939;433940;433941;433942;433943 342996;342997;342998;342999;343000;343001 342997 5 THPEVCGREGEEK Unmodified 1526.6784 0.67835487 186 O14545 TRAFD1 TRAF-type zinc finger domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.8 3.92 2 3 1 1 1 1 1 8.6129 7.4786 3 0.0025843 4949 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.567 46.462 44035000 11884000 0 17637000 1832800 0 0 0 0 0 0 0 0 0 4193900 8486700 51712 186 46426 433944;433945;433946;433947;433948 343002;343003;343004;343005 343002 4 THPLSHSSMQR Unmodified 1279.6092 0.60915309 3638 Q92613 JADE3 Protein Jade-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 7.5036 7.6542 3 0.0010504 6196 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 70.488 63.287 40224000 0 0 0 0 761940 1409100 993720 1485600 1403000 4275200 13423000 6106400 3667500 2305900 4392300 51713 3638 46427 433949;433950;433951;433952;433953;433954;433955;433956;433957;433958;433959 343006;343007;343008;343009 343009 4 THPQWYPAR Unmodified 1154.5621 0.56212655 4756 Q9NZ01 TECR Very-long-chain enoyl-CoA reductase yes yes 0 0 0 By matching By matching By MS/MS By matching By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 35.09 35.504 2 0.018767 38665 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 54.549 44.082 48285000 0 0 0 0 0 0 0 4636300 0 4749700 6347400 10453000 8303200 4627700 9167500 51714 4756 46428 433960;433961;433962;433963;433964;433965;433966 343010 343010 1 THQALGILSK Unmodified 1066.6135 0.61349341 1446 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.249 40.428 2 0.0014803 45560 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 90.827 77.79 591890000 0 0 0 20416000 18706000 60280000 36064000 32871000 26453000 67841000 72603000 77300000 63938000 41606000 73818000 51715 1446 46429 433967;433968;433969;433970;433971;433972;433973;433974;433975;433976;433977;433978 343011;343012;343013;343014;343015;343016;343017;343018;343019;343020;343021;343022 343022 11 THQPSDEVGTSIEHPR Unmodified 1788.8391 0.83908927 4026 Q99575 POP1 Ribonucleases P/MRP protein subunit POP1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 2 28.604 29.084 3;4 9.8436E-06 30363 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.949 56.161 43662000 0 0 0 0 0 4315900 0 0 0 0 0 7509900 0 11051000 20785000 51716 4026 46430 433979;433980;433981;433982;433983 343023;343024 343023 2 THQSALQVQQK Unmodified 1266.668 0.66804818 566 O75962;O60229 TRIO;KALRN Triple functional domain protein;Kalirin yes no 0 0 0 By MS/MS By MS/MS 2 0 4 2 2 16.24 12.964 2;3 1.6109E-06 18792 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 142.83 124.52 86092000 67866000 0 18226000 0 0 0 0 0 0 0 0 0 0 0 0 51717 566 46431 433984;433985;433986;433987 343025;343026;343027 343025 2 THRGATAAPGSGSAPAPAPKPEAAAK Unmodified 2368.2248 0.224755 27 A6NFI3 ZNF316 Zinc finger protein 316 yes yes 0 0 2 By MS/MS 2 0 1 1 29.103 23.482 4 0.0026173 33170 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 30.223 25.677 6263200 6263200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51718 27 46432 433988 343028 343028 0 THSAASSSQGASVNPEPLHSSLDK Unmodified 2406.1411 0.14114453 3629 Q92574 TSC1 Hamartin yes yes 0 0 0 By MS/MS By MS/MS 2 0 4 2 2 45.189 39.589 3;4 9.5652E-57 54891 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 127.96 125.03 79534000 58771000 0 20763000 0 0 0 0 0 0 0 0 0 0 0 0 51719 3629 46433 433989;433990;433991;433992 343029;343030;343031;343032;343033;343034 343031 6 THSDVSSEQQHLK Unmodified 1494.7063 0.70628418 775 P04150 NR3C1 Glucocorticoid receptor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.81 2.8 3 1 22 1 2 1 1 2 2 2 2 2 2 1 2 2 2 2 9.7911 9.3773 2;3 6.1856E-90 7525 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 181.49 174.58 681230000 25339000 47948000 66954000 38244000 43990000 32318000 46217000 44968000 21767000 29103000 0 146130000 51568000 31599000 55085000 51720 775 46434 433993;433994;433995;433996;433997;433998;433999;434000;434001;434002;434003;434004;434005;434006;434007;434008;434009;434010;434011;434012;434013;434014;434015;434016;434017;434018 343035;343036;343037;343038;343039;343040;343041;343042;343043;343044;343045;343046;343047;343048;343049;343050;343051;343052;343053;343054;343055;343056 343054 20 THSEEFTNSLK Unmodified 1291.6044 0.60444487 4430 Q9H788 SH2D4A SH2 domain-containing protein 4A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 7.11 3.8 6 1 12 2 3 2 1 1 1 1 1 1 1 1 2 1 1 31.405 29.677 2;3 1.7025E-28 38425 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 197.21 175.84 556090000 19079000 281420000 144280000 0 2846900 8686800 5140800 9661400 6674300 11759000 12865000 10596000 14457000 10169000 18461000 51721 4430 46435 434019;434020;434021;434022;434023;434024;434025;434026;434027;434028;434029;434030;434031;434032;434033;434034;434035;434036;434037 343057;343058;343059;343060;343061;343062;343063;343064;343065 343063 8 THSFENVSCHLPDSR Unmodified 1784.79 0.79003058 2830 Q5VZ89 DENND4C DENN domain-containing protein 4C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching 10 0 5 1 1 1 1 1 42.221 42.655 3 0.028355 47594 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 25.823 20.611 29213000 0 0 0 0 0 3719800 0 5414500 0 0 7191200 8051600 0 0 4835600 51722 2830 46436 434038;434039;434040;434041;434042 343066 343066 1 THSIIPR Unmodified 822.47119 0.47118627 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 21.884 22.134 2 0.03357 21593 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.852 30.35 26610000 0 0 0 1851500 0 3002900 0 0 2922500 0 0 11657000 0 0 7176900 51723 5189 46437 434043;434044;434045;434046;434047 343067 343067 1 THSLLGSGTTEENK Unmodified 1472.7107 0.71070086 2749 Q5MNZ9 WIPI1 WD repeat domain phosphoinositide-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 4 1 1 2 40.813 36.179 2 3.1571E-09 35117 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 138.76 130.54 437970000 7226500 299770000 130970000 0 0 0 0 0 0 0 0 0 0 0 0 51724 2749 46438 434048;434049;434050;434051 343068;343069 343068 1 THSQAASLTTAEDLASSCSSNTVVANGK Unmodified 2806.3039 0.30392911 4812 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein yes yes 0 0 0 By MS/MS 2 0 1 1 71.753 66.026 3 1.3057E-67 83971 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.614 96.408 36595000 0 36595000 0 0 0 0 0 0 0 0 0 0 0 0 0 51725 4812 46439 434052 343070 343070 1 THSSFSSTVK Unmodified 1079.5247 0.52473799 4046 Q99698 LYST Lysosomal-trafficking regulator yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 15.951 12.694 2 0.027342 18697 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.019 36.047 7943200 6328300 0 1614800 0 0 0 0 0 0 0 0 0 0 0 0 51726 4046 46440 434053;434054 343071 343071 1 THSSLLCPK Unmodified 1041.5277 0.52771487 36 A8K2U0 A2ML1 Alpha-2-macroglobulin-like protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 22.214 22.053 2 0.009002 23058 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 67.993 49.262 7201300 0 0 0 7201300 0 0 0 0 0 0 0 0 0 0 0 51727 36 46441 434055 343072 343072 1 THSTHPDDEDSGPYK Unmodified 1684.6965 0.69650735 1179 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 8.9315 9.0899 3 0.00079126 6020 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 58.071 49.895 24734000 0 0 0 0 1419600 1743900 1652400 0 721430 1176500 5544100 4161100 2867300 1652200 3795700 51728 1179 46442 434056;434057;434058;434059;434060;434061;434062;434063;434064;434065 343073;343074;343075;343076 343074 4 THSTSSSLGSGESPFSR Unmodified 1722.7809 0.78090569 4889 Q9UGV2 NDRG3 Protein NDRG3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 39.154 39.336 3 0.0009169 43817 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 50.053 27.447 73756000 0 0 0 3860400 3230300 9755100 4756700 0 4648700 7466900 7882100 8901200 6176800 7225300 9852600 51729 4889 46443 434066;434067;434068;434069;434070;434071;434072;434073;434074;434075;434076 343077;343078;343079;343080;343081 343077 5 THSVNGITEEADPTIYSGK Unmodified 2017.9593 0.95926398 517 O75534 CSDE1 Cold shock domain-containing protein E1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 4 2 12 1 4 1 1 1 1 1 1 1 1 1 1 1 1 1 56.143 54.373 2;3 5.2622E-200 70114 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 300.07 294.35 1259200000 31923000 998510000 17204000 8324200 7149100 12727000 11872000 14839000 11008000 14157000 27016000 20555000 12796000 21944000 49135000 51730 517 46444 434077;434078;434079;434080;434081;434082;434083;434084;434085;434086;434087;434088;434089;434090;434091;434092;434093;434094 343082;343083;343084;343085;343086;343087;343088;343089;343090;343091;343092;343093;343094;343095;343096;343097;343098;343099;343100;343101;343102;343103;343104;343105 343088 24 THSVPSATSK Unmodified 1013.5142 0.5141733 2973 Q6ULP2 AFTPH Aftiphilin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 7.978 4.9402 2 0.00011922 8413 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 120.31 78.019 61694000 29853000 18689000 13152000 0 0 0 0 0 0 0 0 0 0 0 0 51731 2973 46445 434095;434096;434097 343106;343107;343108 343107 3 THTDTESEASILGDSGEYK Unmodified 2038.8967 0.89672331 5165 Q9Y3E5 PTRH2 Peptidyl-tRNA hydrolase 2, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 54.263 51.434 3 0.0052963 66291 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 48.288 39.469 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51732 5165 46446 434098;434099 343109;343110 343109 2 THTIQGTIK Unmodified 997.55564 0.55564418 631 O95235 KIF20A Kinesin-like protein KIF20A yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 15.855 15.325 2 0.008867 13780 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.383 42.489 2703400000 0 2164400000 519600000 0 0 0 1803300 0 0 0 3303000 4424600 2666100 2315900 4900300 51733 631 46447 434100;434101;434102;434103;434104;434105;434106;434107 343111;343112;343113;343114 343112 4 THTITIESEGK Unmodified 1214.6143 0.61428128 4814 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 2 1 2 1 1 1 2 1 2 2 23.292 23.538 2;3 0.0003762 23750 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 62.633 54.877 78301000 0 0 0 3578300 6403200 0 1700000 5741800 1284500 2063600 2710500 21748000 8497200 8387300 16187000 51734 4814 46448 434108;434109;434110;434111;434112;434113;434114;434115;434116;434117;434118;434119;434120;434121;434122;434123 343115;343116;343117;343118;343119;343120;343121;343122;343123 343120 8 THTMGGDFSGK Unmodified 1136.4921 0.49205765 116 O00139 KIF2A Kinesin-like protein KIF2A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 4 3.46 3 1 1 1 1 1 20.14 17.395 2 0.0038752 23599 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.771 65.627 48822000 26801000 10539000 9462400 0 0 0 0 0 0 0 0 0 0 0 2019900 51735 116 46449 434124;434125;434126;434127 343124;343125;343126;343127 343124 4 THTMGGDFSGK Oxidation (M) 1152.487 0.48697227 116 O00139 KIF2A Kinesin-like protein KIF2A yes yes 0 1 0 By MS/MS By MS/MS By matching 2 0 3 1 1 1 8.901 5.8154 2 0.0014143 10183 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.149 47.147 38169000 8960800 18655000 10554000 0 0 0 0 0 0 0 0 0 0 0 0 51736 116 46449 434128;434129;434130 343128;343129;343130 343130 149 2 THTMGGDLSGK Unmodified 1102.5077 0.50770771 4043 Q99661 KIF2C Kinesin-like protein KIF2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13.887 13.349 2 0.00059844 12649 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 79.986 62.6 88425000 21827000 16335000 11325000 1554400 2454500 2249600 3031400 2164200 2151200 3686200 4164900 4244700 4272100 3242800 5723000 51737 4043 46450 434131;434132;434133;434134;434135;434136;434137;434138;434139;434140;434141;434142;434143;434144;434145 343131;343132;343133;343134;343135;343136;343137;343138;343139;343140;343141;343142;343143 343132 13 THTMGGDLSGK Oxidation (M) 1118.5026 0.50262234 4043 Q99661 KIF2C Kinesin-like protein KIF2C yes yes 0 1 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 6.2104 5.4899 2 3.2482E-09 5731 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 133.83 104.92 114830000 8883200 51244000 24751000 3041300 3152100 0 0 0 0 4930400 2897100 3839100 4658400 3911700 3516800 51738 4043 46450 434146;434147;434148;434149;434150;434151;434152;434153;434154;434155;434156 343144;343145;343146;343147;343148 343145 5549 5 THTMLGSPEQPGVIPR Unmodified 1718.8774 0.87738903 2449 Q14807 KIF22 Kinesin-like protein KIF22 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 58.796 58.94 3 0.036267 66968 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 26.292 16.234 46808000 0 0 0 0 3336900 5645700 3355900 0 0 5524000 7083100 0 5652800 5865200 10345000 51739 2449 46451 434157;434158;434159;434160;434161;434162;434163;434164 343149 343149 1 THTQDAVPLTLGQEFSGYVQQVK Unmodified 2545.2813 0.28126682 854 P07954 FH Fumarate hydratase, mitochondrial yes yes 0 0 0 By MS/MS 10 0 1 1 86.758 86.917 3 3.5342E-10 100443 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.915 58.963 8520700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8520700 51740 854 46452 434165 343150 343150 1 THVADFAPEVAWVTR Unmodified 1697.8526 0.85255449 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8 3.46 3 9 1 2 1 1 1 1 1 1 1 2 82.856 81.494 2;3 6.5249E-06 94374 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 80.632 74.55 165200000 22362000 59397000 0 0 0 5939200 0 3290300 3233300 8593500 5993100 4783800 0 4253200 47356000 51741 848 46453 434166;434167;434168;434169;434170;434171;434172;434173;434174;434175;434176;434177 343151;343152;343153;343154;343155;343156;343157;343158 343151 7 THVCNLK Unmodified 870.43817 0.43817159 4988 Q9UL63 MKLN1 Muskelin yes yes 0 0 0 By MS/MS 2 0 1 1 10.238 6.4635 2 0.0086719 10523 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 146.87 42.106 80963000 80963000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51742 4988 46454 434178 343159 343159 1 THVDILNDFTLDVMK Oxidation (M) 1775.8764 0.87638598 936 P11172 UMPS Uridine 5'-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5'-phosphate decarboxylase yes yes 0 1 0 By MS/MS By MS/MS 2.67 0.471 1 2 2 1 89.544 84.574 3 0.00067629 107758 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.377 58.37 24714000 22500000 2213400 0 0 0 0 0 0 0 0 0 0 0 0 0 51743 936 46455 434179;434180;434181 343160;343161 343161 1220 2 THVDILNDFTLDVMK Unmodified 1759.8815 0.88147135 936 P11172 UMPS Uridine 5'-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5'-phosphate decarboxylase yes yes 0 0 0 By MS/MS 2 0 1 1 96.379 88.248 3 0.00025653 113985 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.467 62.289 23112000 23112000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51744 936 46455 434182 343162 343162 1 THVDSHGHNVFK Unmodified 1376.6585 0.65854613 1590 P49736 MCM2 DNA replication licensing factor MCM2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 12.999 13.378 3 8.2944E-05 11666 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.69 65.303 35061000 0 0 0 0 0 0 0 0 0 0 8756200 7726600 5132100 0 13447000 51745 1590 46456 434183;434184;434185;434186 343163;343164;343165;343166 343164 4 THVMLGAETEEK Oxidation (M) 1359.634 0.63403044 44;4563 C4AMC7;Q6VEQ5;A8K0Z3;A8MWX3;Q9NQA3 WASH3P;WASH2P;WASH1;WASH4P;WASH6P Putative WAS protein family homolog 3;WAS protein family homolog 2;WAS protein family homolog 1;Putative WAS protein family homolog 4;WAS protein family homolog 6 no no 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 27.306 23.625 2 0.00014538 29668 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 97.456 65.042 15610000 0 10251000 5358900 0 0 0 0 0 0 0 0 0 0 0 0 51746 44;4563 46457 434187;434188 343167;343168;343169 343169 39 3 THVMLGAETEEK Unmodified 1343.6391 0.63911582 44;4563 C4AMC7;Q6VEQ5;A8K0Z3;A8MWX3;Q9NQA3 WASH3P;WASH2P;WASH1;WASH4P;WASH6P Putative WAS protein family homolog 3;WAS protein family homolog 2;WAS protein family homolog 1;Putative WAS protein family homolog 4;WAS protein family homolog 6 no no 0 0 0 By MS/MS 2 0 2 2 33.223 29.951 2;3 0.0027358 37875 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 83 63.213 13232000 0 0 13232000 0 0 0 0 0 0 0 0 0 0 0 0 51747 44;4563 46457 434189;434190 343170;343171;343172 343171 3 THWTLDK Unmodified 899.45012 0.45011648 3735;4100 Q96AC1;Q9BQL6 FERMT2;FERMT1 Fermitin family homolog 2;Fermitin family homolog 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 34.711 29.86 2 0.031968 41875 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.323 47.219 405890000 380040000 0 25845000 0 0 0 0 0 0 0 0 0 0 0 0 51748 3735;4100 46458 434191;434192;434193 343173;343174 343174 2 THYPAQQGEYQTHQPVYHK Unmodified 2311.077 0.077028128 694 O95817 BAG3 BAG family molecular chaperone regulator 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.56 3.03 4 1 22 3 2 1 1 1 2 3 2 3 3 1 2 3 29.37 28.736 3;4;5 1.0463E-46 30291 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 95.767 89.038 691180000 385460000 0 14720000 0 2527100 7775700 5707700 15121000 11803000 26984000 43203000 59475000 17468000 28541000 72399000 51749 694 46459 434194;434195;434196;434197;434198;434199;434200;434201;434202;434203;434204;434205;434206;434207;434208;434209;434210;434211;434212;434213;434214;434215;434216;434217;434218;434219;434220 343175;343176;343177;343178;343179;343180;343181;343182;343183;343184;343185;343186;343187;343188;343189;343190;343191;343192;343193;343194;343195;343196;343197;343198 343189 21 THYQADIER Unmodified 1131.5309 0.530886 670 O95573 ACSL3 Long-chain-fatty-acid--CoA ligase 3 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 19.503 19.507 2 0.0037394 20113 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 122.13 96.398 55766000 0 0 0 8079700 9126400 8373900 8688500 0 7394600 0 0 0 14103000 0 0 51750 670 46460 434221;434222;434223;434224;434225;434226;434227;434228 343199;343200;343201;343202;343203;343204;343205 343205 6 THYSNIEANESEEVR Unmodified 1776.7915 0.79147037 784 P04632 CAPNS1 Calpain small subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 32.066 32.252 2;3 2.6867E-27 35058 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 111.43 106.53 1162600000 0 0 0 47970000 53115000 73681000 71683000 79015000 72109000 83968000 129020000 133240000 119570000 74061000 225160000 51751 784 46461 434229;434230;434231;434232;434233;434234;434235;434236;434237;434238;434239;434240;434241;434242;434243;434244;434245;434246;434247;434248;434249;434250;434251;434252 343206;343207;343208;343209;343210;343211;343212;343213;343214;343215;343216;343217;343218;343219;343220 343209 15 THYSNIEANESEEVRQFR Unmodified 2208.0196 0.019572828 784 P04632 CAPNS1 Calpain small subunit 1 yes yes 0 0 1 By matching By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 2 2 1 2 48.658 49.019 3;4 4.4199E-15 54173 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.203 86.582 130170000 0 0 0 0 0 0 7269000 29771000 16298000 0 0 16547000 0 0 60286000 51752 784 46462 434253;434254;434255;434256;434257;434258;434259;434260 343221;343222;343223;343224;343225 343222 5 TIAATPIQTLPQSQSTPK Unmodified 1881.0207 0.020742027 1007 P14859 POU2F1 POU domain, class 2, transcription factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 65.128 65.216 2;3 1.9789E-38 74457 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 150.11 118.51 959960000 0 0 0 58999000 48900000 51592000 79109000 94107000 55508000 83427000 94578000 105690000 92037000 72390000 123630000 51753 1007 46463 434261;434262;434263;434264;434265;434266;434267;434268;434269;434270;434271;434272;434273;434274;434275;434276;434277;434278;434279;434280;434281;434282;434283;434284 343226;343227;343228;343229;343230;343231;343232;343233;343234;343235;343236;343237;343238;343239;343240;343241;343242;343243;343244 343239 14 TIADHCPDSACK Unmodified 1373.5704 0.57038433 1340 P35221 CTNNA1 Catenin alpha-1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 15.589 12.156 3 0.047744 16014 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 33.685 25.961 22354000 0 22354000 0 0 0 0 0 0 0 0 0 0 0 0 0 51754 1340 46464 434285;434286 343245 343245 1 TIAEALIMSIDIR Oxidation (M) 1460.7909 0.79086543 5320 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 2 2 1 62.424 61.833 2 0.0022642 70556 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 53.756 25.743 + 54056000 0 21497000 0 2139000 0 0 0 0 0 0 3080100 16559000 8301100 2479900 0 51755 5320 46465 434287;434288;434289;434290;434291;434292;434293;434294 343246;343247;343248;343249 343248 6717 3 TIAECLADELINAAK Unmodified 1630.8236 0.82362212 1512 P46782 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.92 3.62 5 3 4 2 5 1 1 1 1 1 96.975 94.052 2;3 5.6022E-72 116124 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 194.49 170.1 501640000 52458000 436340000 5880100 1194700 773960 0 0 0 0 2439300 0 0 0 0 2551200 51756 1512 46466 434295;434296;434297;434298;434299;434300;434301;434302;434303;434304;434305;434306 343250;343251;343252;343253;343254;343255;343256;343257 343250 6 TIAEIFGNPNYLR Unmodified 1506.7831 0.78307794 2602 Q16401 PSMD5 26S proteasome non-ATPase regulatory subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 2 1 1 1 1 1 1 84.085 84.21 2 3.6135E-07 97261 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.665 75.666 39175000 0 0 0 0 0 1949800 0 0 0 7599200 5518800 6103600 0 3413700 14590000 51757 2602 46467 434307;434308;434309;434310;434311;434312;434313;434314 343258;343259;343260;343261;343262;343263;343264 343260 6 TIAEQLAEK Unmodified 1001.5393 0.53932542 3041 Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.12 3.72 4 2 10 3 2 1 1 1 1 1 1 1 1 1 1 1 39.089 37.314 2 0.0015101 46323 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 135.83 72.265 1982600000 171620000 706610000 54987000 88141000 82626000 127610000 111950000 104240000 99992000 141970000 0 154970000 137920000 0 0 51758 3041 46468 434315;434316;434317;434318;434319;434320;434321;434322;434323;434324;434325;434326;434327;434328;434329;434330 343265;343266;343267;343268;343269;343270;343271;343272;343273;343274;343275;343276;343277;343278;343279;343280 343271 15 TIAETEAAYLK Unmodified 1208.6289 0.62886871 368 O43805 SSNA1 Sjoegren syndrome nuclear autoantigen 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 55.756 56.163 2 0.00031395 62913 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 102.61 73.522 24351000 0 0 0 0 0 0 0 0 0 0 5187300 0 0 7452900 11711000 51759 368 46469 434331;434332;434333 343281;343282;343283 343281 3 TIAFLLPMFR Oxidation (M) 1223.6737 0.67365083 3041 Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 0 1 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 93.098 93.228 2 0.0049721 108003 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.2 57.749 9944700 0 0 0 0 0 1562300 0 958370 0 1156700 854340 1437200 0 732010 3243800 51760 3041 46470 434334;434335;434336;434337;434338;434339;434340 343284;343285 343285 4664 2 TIAIIAEGIPEALTR Unmodified 1566.8981 0.8981077 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 3 2 2 2 2 2 2 90.169 90.239 2;3 6.0811E-27 104739 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 109.07 100.28 718980000 0 0 0 6757900 29941000 34343000 88457000 172540000 160370000 65512000 62277000 75574000 0 4047800 19164000 51761 1714 46471 434341;434342;434343;434344;434345;434346;434347;434348;434349;434350;434351;434352;434353;434354;434355;434356;434357;434358;434359;434360;434361;434362;434363 343286;343287;343288;343289;343290;343291;343292;343293;343294;343295;343296;343297;343298;343299;343300;343301;343302;343303;343304;343305;343306 343300 20 TIAIIAEGIPEALTRK Unmodified 1694.9931 0.99307071 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 1 2 2 2 2 2 2 2 1 2 85.179 85.28 2;3 1.5786E-10 98263 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 117.86 104.9 929810000 0 0 0 7880400 18604000 54575000 90083000 246790000 277010000 73430000 58088000 59971000 0 4025700 39356000 51762 1714 46472 434364;434365;434366;434367;434368;434369;434370;434371;434372;434373;434374;434375;434376;434377;434378;434379;434380;434381;434382 343307;343308;343309;343310;343311;343312;343313;343314;343315;343316;343317;343318;343319;343320;343321;343322;343323;343324;343325;343326;343327;343328 343317 20 TIAMDGTEGLVR Unmodified 1261.6336 0.63363651 823 P06576 ATP5B ATP synthase subunit beta, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 2 1 1 1 1 1 60.755 60.591 2 0.00088849 68329 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 73.067 50.327 17964000 0 0 0 5473900 2423500 0 0 2894900 0 0 3108100 0 0 4063400 0 51763 823 46473 434383;434384;434385;434386;434387;434388;434389;434390 343329;343330;343331;343332;343333;343334;343335;343336 343332 8 TIAMDGTEGLVR Oxidation (M) 1277.6286 0.62855113 823 P06576 ATP5B ATP synthase subunit beta, mitochondrial yes yes 0 1 0 By MS/MS 10 0 1 1 45.861 45.304 2 0.020111 51509 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 52.579 34.267 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51764 823 46473 434391 343337 343337 991 1 TIANMFGSSEK Unmodified 1183.5543 0.55432356 4617 Q9NRZ9 HELLS Lymphoid-specific helicase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 55.214 55.155 2 0.006407 63692 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 56.632 34.672 27331000 0 0 0 3543200 2639400 0 4599000 5495600 0 0 0 0 0 0 11054000 51765 4617 46474 434392;434393;434394;434395;434396;434397 343338;343339;343340;343341;343342;343343 343342 6 TIAPALVSK Unmodified 898.54877 0.54876789 827 P06733 ENO1 Alpha-enolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.04 3.97 1 9 2 12 6 4 2 1 1 1 2 2 1 2 2 49.604 47.238 1;2 9.0916E-05 48957 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 133.12 88.703 37209000000 11782000000 20402000000 1621000000 198050000 26603000 0 0 0 0 36258000 455610000 471150000 38213000 436590000 1741100000 51766 827 46475 434398;434399;434400;434401;434402;434403;434404;434405;434406;434407;434408;434409;434410;434411;434412;434413;434414;434415;434416;434417;434418;434419;434420;434421 343344;343345;343346;343347;343348;343349;343350;343351;343352;343353;343354;343355;343356;343357;343358;343359;343360;343361;343362;343363;343364;343365;343366;343367;343368;343369;343370;343371;343372;343373 343353 29 TIAPIIGR Unmodified 839.52289 0.52288749 4010 Q99459 CDC5L Cell division cycle 5-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 53.736 53.874 2 0.0068826 60794 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 92.467 74.619 218020000 0 0 0 11790000 10423000 15407000 16000000 11181000 11130000 19935000 31100000 23484000 17352000 15214000 35002000 51767 4010 46476 434422;434423;434424;434425;434426;434427;434428;434429;434430;434431;434432;434433 343374;343375;343376;343377;343378;343379;343380;343381;343382;343383;343384;343385 343375 12 TIAPLVASGAVQLI Unmodified 1351.8075 0.80750177 4118 Q9BRT9 GINS4 DNA replication complex GINS protein SLD5;DNA replication complex GINS protein SLD5, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 2 2 2 2 97.843 92.922 2 2.5004E-29 112831 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 138.4 123.73 725110000 30040000 695070000 0 0 0 0 0 0 0 0 0 0 0 0 0 51768 4118 46477 434434;434435;434436;434437 343386;343387;343388;343389 343388 4 TIAPQNAPR Unmodified 966.52468 0.52467841 4742 Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.433 20.635 2 0.003216 21477 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 104.45 79.525 307770000 0 0 0 16388000 23967000 25904000 15728000 19919000 12611000 24913000 34478000 34002000 37220000 35988000 26650000 51769 4742 46478 434438;434439;434440;434441;434442;434443;434444;434445;434446;434447;434448;434449 343390;343391;343392;343393;343394;343395;343396;343397;343398;343399;343400;343401;343402;343403;343404 343393 15 TIAPQNAPRDESR Unmodified 1453.7274 0.72735397 4742 Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.063 18.252 3 0.0013535 18470 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 60.628 55.906 308910000 0 0 0 17104000 24658000 21059000 23302000 17236000 16744000 29978000 22750000 42664000 30789000 20707000 41917000 51770 4742 46479 434450;434451;434452;434453;434454;434455;434456;434457;434458;434459;434460;434461 343405;343406;343407;343408;343409;343410;343411;343412;343413;343414;343415 343406 8 TIAQDYGVLK Unmodified 1106.5972 0.59717465 2131 Q06830 PRDX1 Peroxiredoxin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 55.232 55.353 2 0.002556 64048 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 82.426 61.126 652660000 0 0 0 46189000 19603000 22660000 25882000 35055000 21179000 38157000 93575000 123810000 0 77531000 149010000 51771 2131 46480 434462;434463;434464;434465;434466;434467;434468;434469;434470;434471;434472 343416;343417;343418;343419;343420;343421;343422;343423;343424;343425;343426;343427;343428;343429 343428 14 TIAQGNLSNTDVQAAK Unmodified 1629.8322 0.83221298 1145 P22695 UQCRC2 Cytochrome b-c1 complex subunit 2, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 41.261 41.374 2 0.00010662 46686 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 94.191 76.756 9816000 0 0 0 6071700 0 0 0 0 0 0 0 0 0 0 3744300 51772 1145 46481 434473;434474;434475 343430;343431 343431 2 TIAQMIEDEQREK Unmodified 1589.7719 0.7719209 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 69.12 63.158 3 0.0010004 81196 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.469 68.855 44244000 11737000 26079000 6427700 0 0 0 0 0 0 0 0 0 0 0 0 51773 645 46482 434476;434477;434478 343432;343433;343434;343435 343432 4 TIAQTTAPVSWKPQDSSEQPQEK Unmodified 2555.2504 0.25036063 659 O95425 SVIL Supervillin yes yes 0 0 1 By MS/MS By matching 10 0 2 1 1 56.729 57.109 3 0.00066507 64653 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 34.914 22.112 16637000 0 0 0 0 0 0 0 0 0 0 0 12246000 0 4391400 0 51774 659 46483 434479;434480 343436 343436 1 TIASELNVAAVDTNLTLAVSK Unmodified 2129.158 0.15796379 5047 Q9UP83 COG5 Conserved oligomeric Golgi complex subunit 5 yes yes 0 0 0 By MS/MS 2 0 1 1 95.715 87.585 3 0.001197 113187 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.841 34.367 9966100 9966100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51775 5047 46484 434481 343437 343437 1 TIATALEYVYK Unmodified 1270.6809 0.68090428 1987 P78537 BLOC1S1 Biogenesis of lysosome-related organelles complex 1 subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 80.21 80.314 2 0.00057718 92882 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 80.688 60.902 56280000 0 0 0 0 2019200 5059400 2631000 5117700 3290700 7134500 7108400 5850200 2780300 2905500 12383000 51776 1987 46485 434482;434483;434484;434485;434486;434487;434488;434489;434490;434491;434492 343438;343439;343440;343441;343442;343443;343444;343445 343438 8 TIDAMDTWEDLTELGYHLADLPVEPHLGK Unmodified 3278.5805 0.58054489 4421 Q9H6S0 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 yes yes 0 0 0 By MS/MS 2 0 1 1 102.01 93.882 4 7.6508E-22 120820 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.359 78.354 18519000 18519000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51777 4421 46486 434493 343446 343446 1 TIDDLEDELYAQK Unmodified 1551.7304 0.73043325 831 P06753 TPM3 Tropomyosin alpha-3 chain yes yes 0 0 0 By MS/MS 2 0 1 1 78.811 74.076 3 0.014654 92418 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 51.135 42.538 25600000 0 25600000 0 0 0 0 0 0 0 0 0 0 0 0 0 51778 831 46487 434494 343447 343447 0 TIDDLEDEVYAQK Unmodified 1537.7148 0.71478318 90;853 CON__Q3SX28;P07951 TPM2 Tropomyosin beta chain no no 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS 7.5 3.55 1 1 4 2 1 1 1 1 68.599 66.658 2;3 1.0697E-08 76601 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 109.42 87.375 + 81272000 0 68405000 0 0 0 0 3576000 1542100 0 0 0 7749300 0 0 0 51779 90;853 46488 434495;434496;434497;434498;434499;434500 343448;343449;343450;343451;343452;343453 343452 6 TIDDLEEK Unmodified 961.46041 0.4604064 1957 P67936 TPM4 Tropomyosin alpha-4 chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 27.954 27.002 2 0.0045343 29106 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 110.31 51.104 1992000000 221340000 1150600000 7900800 28145000 26012000 21804000 25726000 32626000 19859000 30147000 91750000 81860000 46705000 74914000 132620000 51780 1957 46489 434501;434502;434503;434504;434505;434506;434507;434508;434509;434510;434511;434512;434513;434514;434515;434516 343454;343455;343456;343457;343458;343459;343460;343461;343462;343463;343464;343465;343466;343467;343468 343462 15 TIDEGDADEVTK Unmodified 1291.578 0.57795535 3061 Q7LBC6 KDM3B Lysine-specific demethylase 3B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.797 28.993 2 6.0755E-20 31150 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 161.17 150.42 880860000 0 0 0 49251000 47738000 53832000 56191000 65254000 43691000 64596000 89394000 122160000 98173000 79945000 110630000 51781 3061 46490 434517;434518;434519;434520;434521;434522;434523;434524;434525;434526;434527;434528 343469;343470;343471;343472;343473;343474;343475;343476;343477;343478;343479;343480 343472 11 TIDGHINLGMPLK Unmodified 1407.7544 0.75442035 2967 Q6SJ93 FAM111B Protein FAM111B yes yes 0 0 0 By MS/MS 2 0 1 1 80.816 72.686 3 0.0020106 95294 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.121 49.864 30998000 30998000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51782 2967 46491 434529 343481 343481 1 TIDGQQTIIACIESHQFQPK Unmodified 2313.1423 0.1423305 1705 P52907 CAPZA1 F-actin-capping protein subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 4 1 2 1 87.868 82.816 3 7.9993E-72 105475 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 119.38 110.73 175780000 59827000 113820000 2133800 0 0 0 0 0 0 0 0 0 0 0 0 51783 1705 46492 434530;434531;434532;434533 343482;343483 343482 2 TIDLCNNPMTK Oxidation (M) 1321.6006 0.60062182 4751 Q9NYU2 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 40.269 35.41 2 0.0029638 46086 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.831 70.019 39695000 0 39695000 0 0 0 0 0 0 0 0 0 0 0 0 0 51784 4751 46493 434534;434535 343484 343484 6129 1 TIDLGAAAHYTGDK Unmodified 1431.6994 0.69940789 2428 Q14677 CLINT1 Clathrin interactor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.3 2.25 2 21 1 1 2 2 2 1 2 2 2 2 2 2 2 54.828 54.496 2;3 2.2854E-05 61819 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 87.363 68.048 599750000 0 122920000 13227000 28146000 25131000 33726000 41409000 49677000 47118000 50441000 52251000 0 44262000 39798000 51636000 51785 2428 46494 434536;434537;434538;434539;434540;434541;434542;434543;434544;434545;434546;434547;434548;434549;434550;434551;434552;434553;434554;434555;434556;434557;434558 343485;343486;343487;343488;343489;343490;343491;343492;343493;343494;343495;343496;343497 343495 9 TIDNADSSTLHAVTFLR Unmodified 1859.9377 0.93774068 3446 Q8NFH3 NUP43 Nucleoporin Nup43 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.955 76.016 3 3.1231E-10 87259 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.335 60.755 126710000 0 0 0 3218900 4589300 9888400 5256100 7146600 7091600 12388000 9715900 14296000 7399000 8791200 36928000 51786 3446 46495 434559;434560;434561;434562;434563;434564;434565;434566;434567;434568;434569;434570 343498;343499;343500;343501;343502;343503;343504;343505;343506;343507 343501 9 TIDPELLGK Unmodified 984.54916 0.54916182 1024 P15586 GNS N-acetylglucosamine-6-sulfatase yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 64.01 59.17 2 0.011069 75749 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.38 50.231 162100000 0 160180000 1920900 0 0 0 0 0 0 0 0 0 0 0 0 51787 1024 46496 434571;434572 343508;343509 343509 2 TIDQIHK Unmodified 853.46577 0.46576654 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 3 9 1 1 1 1 1 1 1 1 1 1 1 1 11.679 10.967 2 0.021122 13646 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 110.63 37.594 746460000 102930000 14311000 135060000 54117000 24086000 26376000 54425000 0 0 48021000 61843000 110750000 32374000 0 82173000 51788 2102 46497 434573;434574;434575;434576;434577;434578;434579;434580;434581;434582;434583;434584 343510;343511;343512;343513;343514;343515;343516 343513 6 TIDYIQFLHK Unmodified 1276.6816 0.68157298 4891 Q9UH92 MLX Max-like protein X yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 78.527 78.631 3 0.0039139 90635 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 53.751 48.653 56862000 0 0 0 0 1195600 4933000 2471200 5467400 3946300 4898300 3235100 6894500 5181800 5947400 12692000 51789 4891 46498 434585;434586;434587;434588;434589;434590;434591;434592;434593;434594;434595 343517;343518;343519;343520;343521;343522;343523;343524 343521 8 TIDYNPSVIK Unmodified 1148.6077 0.60773933 4293 Q9C0J8 WDR33 pre-mRNA 3' end processing protein WDR33 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 7 3.69 1 1 3 2 1 1 1 56.815 54.625 2 0.032834 69517 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 57.859 41.083 95265000 0 75713000 0 0 6667800 0 5803700 0 7081200 0 0 0 0 0 0 51790 4293 46499 434596;434597;434598;434599;434600 343525;343526;343527 343526 3 TIEAEAAHGTVTR Unmodified 1354.6841 0.68409218 1553 P48735 IDH2 Isocitrate dehydrogenase [NADP], mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 25.525 25.683 3 0.0016599 26100 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.112 35.316 33043000 0 0 0 0 5392500 0 5807200 0 5114600 0 0 0 0 8951600 7776800 51791 1553 46500 434601;434602;434603;434604;434605 343528;343529 343529 2 TIECISLIGLAVGK Unmodified 1472.8273 0.82725094 149 O00410 IPO5 Importin-5 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 95.118 89.805 2 0.00081965 114073 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.31 50.104 34492000 32867000 0 1625300 0 0 0 0 0 0 0 0 0 0 0 0 51792 149 46501 434606;434607 343530;343531;343532 343531 3 TIEDDLVSALVR Unmodified 1329.714 0.71399532 5258 Q9Y606 PUS1 tRNA pseudouridine synthase A, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 89.871 90.024 2 0.0043631 104220 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.1 43.716 13623000 0 0 0 0 0 0 0 878250 883060 2575300 1919400 1329700 0 1611500 4425700 51793 5258 46502 434608;434609;434610;434611;434612;434613;434614 343533;343534;343535;343536;343537;343538;343539;343540 343534 8 TIEDLATQLNLK Unmodified 1357.7453 0.74529545 1406 P39880 CUX1 Homeobox protein cut-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81.76 81.295 2 3.102E-08 93743 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 152.28 88.236 364810000 0 160210000 2238800 5556900 10863000 14114000 16011000 15578000 11773000 26605000 19912000 18996000 16391000 18891000 27671000 51794 1406 46503 434615;434616;434617;434618;434619;434620;434621;434622;434623;434624;434625;434626;434627;434628 343541;343542;343543;343544;343545;343546;343547;343548;343549;343550;343551;343552;343553;343554 343545 14 TIEDLRNK Unmodified 987.53491 0.53490874 56;70 CON__P02533;P02533;CON__P08779;P08779 KRT14;KRT16 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16 no no 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 21.915 18.055 2 0.047482 23160 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 113.41 2.6041 + 160740000 28963000 45217000 86562000 0 0 0 0 0 0 0 0 0 0 0 0 51795 56;70 46504 434629;434630;434631 343555 343555 0 TIEDTLMTVK Unmodified 1149.5951 0.59512574 1712 P53367 ARFIP1 Arfaptin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.68 1.57 1 24 1 2 2 2 2 2 2 2 2 2 2 2 2 70.078 69.928 2 0.010295 76069 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 56.258 36.472 623440000 0 282110000 0 32825000 32571000 26546000 12276000 21918000 12101000 24926000 35210000 36247000 28171000 43469000 35074000 51796 1712 46505 434632;434633;434634;434635;434636;434637;434638;434639;434640;434641;434642;434643;434644;434645;434646;434647;434648;434649;434650;434651;434652;434653;434654;434655;434656 343556;343557;343558;343559;343560;343561;343562;343563;343564;343565;343566;343567;343568 343565 9 TIEDTLMTVK Oxidation (M) 1165.59 0.59004036 1712 P53367 ARFIP1 Arfaptin-1 yes yes 0 1 0 By MS/MS 3 0 1 1 57.379 52.526 2 0.033627 64712 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 55.549 45.52 4381000 0 4381000 0 0 0 0 0 0 0 0 0 0 0 0 0 51797 1712 46505 434657 343569 343569 1 TIEELQNK Unmodified 973.50803 0.50802529 84 CON__Q04695;Q04695 KRT17 Keratin, type I cytoskeletal 17 yes no 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 23.873 23.927 2 0.010456 24743 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 79.597 31.748 + 445400000 0 0 0 189750000 0 38853000 0 0 0 0 0 0 216800000 0 0 51798 84 46506 434658;434659;434660 343570;343571;343572 343571 2 TIEELQQK Unmodified 987.52368 0.52367535 86;87;111 CON__Q14525;Q14525;CON__Q15323;CON__Q9UE12;Q15323;CON__REFSEQ:XP_986630 KRT33B;KRT31 Keratin, type I cuticular Ha3-II;Keratin, type I cuticular Ha1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 24.992 25.183 2 0.004618 25451 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 130.77 66.008 + 152580000 0 0 0 0 0 17236000 11048000 35497000 9194200 17799000 0 0 0 0 61808000 51799 86;87;111 46507 434661;434662;434663;434664;434665;434666 343573;343574;343575;343576;343577 343576 5 TIEELSNAR Unmodified 1031.5247 0.52473799 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 31.727 31.907 2 0.005128 34826 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 82.75 11.249 508350000 0 0 0 38022000 33551000 0 51654000 43755000 33371000 0 0 104040000 71524000 45332000 87104000 51800 2556 46508 434667;434668;434669;434670;434671;434672;434673;434674;434675 343578;343579;343580;343581;343582;343583;343584;343585 343578 6 TIEESEETLK Unmodified 1177.5714 0.57141341 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31.046 30.249 2 0.00055012 33757 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 123.86 88.565 847760000 25404000 333410000 1418100 21605000 21408000 40951000 27885000 24367000 24691000 41865000 50268000 70440000 47274000 43161000 73607000 51801 643 46509 434676;434677;434678;434679;434680;434681;434682;434683;434684;434685;434686;434687;434688;434689;434690 343586;343587;343588;343589;343590;343591;343592;343593;343594;343595;343596;343597;343598;343599;343600 343600 15 TIEEYAVCPDLK Unmodified 1436.6857 0.68573166 1380 P36871 PGM1 Phosphoglucomutase-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 4 2 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 67.343 65.475 2;3 1.2039E-18 80257 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 159.4 128.33 3622000000 68430000 3320300000 17244000 2372300 0 4676500 4308300 4006300 2496000 5015600 27520000 30999000 4212000 32077000 98361000 51802 1380 46510 434691;434692;434693;434694;434695;434696;434697;434698;434699;434700;434701;434702;434703;434704;434705;434706;434707;434708 343601;343602;343603;343604;343605;343606;343607;343608;343609;343610;343611;343612;343613;343614;343615;343616;343617;343618 343613 17 TIEGITVTVHMPK Oxidation (M) 1440.7647 0.76465068 5117 Q9Y2T2 AP3M1 AP-3 complex subunit mu-1 yes yes 0 1 0 By MS/MS By MS/MS 2 0 3 1 2 61.923 56.638 2;3 6.8908E-06 76213 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.38 82.402 37093000 12547000 0 24546000 0 0 0 0 0 0 0 0 0 0 0 0 51803 5117 46511 434709;434710;434711 343619;343620;343621 343619 6505 3 TIEGITVTVHMPK Unmodified 1424.7697 0.76973606 5117 Q9Y2T2 AP3M1 AP-3 complex subunit mu-1 yes yes 0 0 0 By MS/MS 2 0 1 1 79.905 71.775 2 0.026434 94405 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.841 52.06 8240100 8240100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51804 5117 46511 434712 343622 343622 0 TIEGVTVTSQMPK Unmodified 1389.7174 0.71736614 1724 P53677 AP3M2 AP-3 complex subunit mu-2 yes yes 0 0 0 By MS/MS 2 0 1 1 64.033 58.125 2 0.0017474 74497 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.596 60.824 23375000 0 23375000 0 0 0 0 0 0 0 0 0 0 0 0 0 51805 1724 46512 434713 343623 343623 1 TIEIESLNEVLK Unmodified 1386.7606 0.76061116 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 85.269 84.754 2 7.082E-06 105593 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 135.55 106.59 96314000 0 39383000 1204800 0 4496600 0 3944900 4178500 4765200 8840400 5426200 6811200 3559000 4346100 9358600 51806 2291 46513 434714;434715;434716;434717;434718;434719;434720;434721;434722;434723;434724;434725;434726 343624;343625;343626;343627;343628;343629;343630;343631;343632;343633;343634;343635;343636;343637;343638 343628 15 TIEIQATNALDEK Unmodified 1444.7409 0.74093835 4559 Q9NQ48 LZTFL1 Leucine zipper transcription factor-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS 5 3.56 1 1 1 2 1 66.443 61.132 2 4.7842E-18 77950 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 147.74 95.489 135880000 0 135880000 0 0 0 0 0 0 0 0 0 0 0 0 0 51807 4559 46514 434727;434728;434729 343639;343640;343641;343642 343639 4 TIELDGK Unmodified 774.41233 0.41233399 1911;4338;1824;3689 P62820;P61006;Q92930;Q9H0U4 RAB1A;RAB8A;RAB8B;RAB1B Ras-related protein Rab-1A;Ras-related protein Rab-8A;Ras-related protein Rab-8B;Ras-related protein Rab-1B no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 25.993 26.241 2 0.023899 27787 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 94.262 36.798 874170000 0 0 0 0 66998000 0 82207000 0 51125000 125440000 0 138060000 127350000 103080000 179920000 51808 1911;1824;3689;4338 46515 434730;434731;434732;434733;434734;434735;434736;434737 343643;343644;343645;343646 343646 4 TIELFSTEK Unmodified 1066.5546 0.55464113 2972 Q6UB99 ANKRD11 Ankyrin repeat domain-containing protein 11 yes yes 0 0 0 By MS/MS 2 0 1 1 70.904 65.087 2 0.044063 82820 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.334 49.185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51809 2972 46516 434738 343647 343647 1 TIELIEFEK Unmodified 1120.6016 0.60159132 4689 Q9NW08 POLR3B DNA-directed RNA polymerase III subunit RPC2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 79.627 78.975 2 0.0031256 91209 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 91.069 60.456 82713000 0 9322400 2433000 3748900 2564900 5639400 2491800 4546200 5071800 8627800 7127800 8598100 5067500 7218700 10254000 51810 4689 46517 434739;434740;434741;434742;434743;434744;434745;434746;434747;434748;434749;434750;434751;434752;434753 343648;343649;343650;343651;343652;343653;343654;343655;343656;343657;343658;343659;343660;343661 343649 14 TIELSDDDFLGECECTLGQIVSSK Unmodified 2715.2255 0.22552736 458 O75131 CPNE3 Copine-3 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 95.621 89.928 3 9.2786E-34 113392 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.509 90.556 39673000 26865000 12808000 0 0 0 0 0 0 0 0 0 0 0 0 0 51811 458 46518 434754;434755;434756 343662;343663;343664;343665;343666;343667 343662 6 TIEQNINNLNVSEADRK Unmodified 1956.9865 0.98648179 2467 Q15003 NCAPH Condensin complex subunit 2 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 54.609 54.729 3 0.0012549 61836 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 42.633 34.345 181400000 0 0 0 7643600 10960000 24654000 16651000 12827000 6486500 16733000 16535000 6134100 0 23958000 38820000 51812 2467 46519 434757;434758;434759;434760;434761;434762;434763;434764;434765;434766;434767 343668;343669;343670;343671;343672;343673;343674 343668 5 TIESANQQTDK Unmodified 1233.5837 0.58370943 578 O76094 SRP72 Signal recognition particle subunit SRP72 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 8.0007 8.1315 2 1.9632E-05 5860 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 149.72 137.67 385460000 0 0 0 26160000 17624000 23928000 24185000 33461000 24657000 28387000 66711000 45341000 39652000 21368000 33985000 51813 578 46520 434768;434769;434770;434771;434772;434773;434774;434775;434776;434777;434778;434779 343675;343676;343677;343678;343679;343680;343681;343682;343683;343684;343685;343686;343687 343680 13 TIESETVR Unmodified 933.47673 0.47672516 346 O43615 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.626 18.788 2 0.011003 18704 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 77.923 30.074 381520000 0 0 0 24172000 36446000 29084000 38051000 33577000 24212000 37045000 36688000 56056000 38681000 27513000 0 51814 346 46521 434780;434781;434782;434783;434784;434785;434786;434787;434788;434789;434790;434791 343688;343689;343690;343691;343692;343693;343694;343695;343696;343697 343695 10 TIESLQNK Unmodified 931.49746 0.4974606 4331 Q9H0K1 SIK2 Serine/threonine-protein kinase SIK2 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching 10 0 4 1 1 1 1 19.845 20.08 2 0.016586 20750 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 67.032 37.883 8341800 0 0 0 0 2310000 0 0 0 0 0 0 3156600 2875200 0 0 51815 4331 46522 434792;434793;434794;434795 343698;343699 343699 2 TIESYCQDVLR Unmodified 1382.65 0.65001485 4674 Q9NVN8 GNL3L Guanine nucleotide-binding protein-like 3-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.982 59.092 2 0.0070621 67179 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 54.982 27.239 97445000 0 0 0 4393200 4686800 8825300 6272400 5171200 5817500 8437000 11231000 12645000 9692800 7365800 12908000 51816 4674 46523 434796;434797;434798;434799;434800;434801;434802;434803;434804;434805;434806;434807 343700;343701;343702;343703 343702 4 TIETLLGSTTK Unmodified 1162.6445 0.64451877 1782 P56282 POLE2 DNA polymerase epsilon subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 6 4 2 2 1 1 1 1 67.474 65.206 2 0.0049301 83863 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.665 69.528 104240000 0 96418000 2441500 0 0 0 1810700 0 0 0 0 0 0 3574600 0 51817 1782 46524 434808;434809;434810;434811 343704;343705;343706 343704 2 TIETLRENSER Unmodified 1346.679 0.6790068 2676 Q3V6T2 CCDC88A Girdin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 22.399 22.591 3 0.012449 23039 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 33.589 11.83 44988000 0 0 0 2589800 1765800 3125800 2720800 2191300 1857700 4497700 6570400 10716000 0 3402900 5549600 51818 2676 46525 434812;434813;434814;434815;434816;434817;434818;434819;434820;434821;434822 343707 343707 1 TIETSPSLSR Unmodified 1089.5666 0.5666028 4669 Q9NVI1 FANCI Fanconi anemia group I protein yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 33.854 33.763 2 0.0018552 37300 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 88.136 39.381 74898000 0 0 0 0 23881000 29451000 0 21566000 0 0 0 0 0 0 0 51819 4669 46526 434823;434824;434825;434826 343708;343709;343710 343708 3 TIETSPSLSRMPNQHACK Unmodified 2055.983 0.98299309 4669 Q9NVI1 FANCI Fanconi anemia group I protein yes yes 0 0 1 By MS/MS 2 0 1 1 47.469 39.754 4 0.00028231 55216 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.525 53.989 21821000 21821000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51820 4669 46527 434827 343711 343711 1 TIEWAEEIK Unmodified 1117.5655 0.56554017 4758 Q9NZ09 UBAP1 Ubiquitin-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 68.451 68.548 2 0.013737 78757 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 59.35 21.376 96948000 0 0 0 57230000 0 0 7466400 0 0 7434900 6857000 0 0 6916500 11043000 51821 4758 46528 434828;434829;434830;434831;434832;434833;434834 343712;343713;343714;343715;343716 343714 5 TIEYLQPNPASR Unmodified 1387.7096 0.70957864 4074;4075 Q99961;Q99962 SH3GL1;SH3GL2 Endophilin-A2;Endophilin-A1 no no 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55.01 54.12 2 2.3901E-05 60447 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 105.86 77.465 547290000 3566600 107370000 0 25986000 19704000 34046000 30100000 25510000 20182000 39849000 50805000 54476000 33434000 29785000 72476000 51822 4074;4075 46529 434835;434836;434837;434838;434839;434840;434841;434842;434843;434844;434845;434846;434847;434848 343717;343718;343719;343720;343721;343722;343723;343724;343725;343726;343727;343728 343725 12 TIEYLQPNPASRAK Unmodified 1586.8417 0.84165545 4074;4075 Q99961;Q99962 SH3GL1;SH3GL2 Endophilin-A2;Endophilin-A1 no no 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 54.598 47.262 2;3 0.0074668 64975 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.466 50.303 104440000 88397000 16039000 0 0 0 0 0 0 0 0 0 0 0 0 0 51823 4074;4075 46530 434849;434850;434851 343729;343730 343730 1 TIFAYFTGSK Unmodified 1133.5757 0.57571092 4106 Q9BRA2 TXNDC17 Thioredoxin domain-containing protein 17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 82.08 80.589 2 0.0035261 93602 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.17 50.433 133430000 28999000 0 0 0 0 0 0 0 0 0 13595000 15856000 0 12046000 62931000 51824 4106 46531 434852;434853;434854;434855;434856;434857 343731;343732;343733;343734;343735;343736;343737 343737 7 TIFFKDDGNYKTR Unmodified 1603.7995 0.79945628 110 CON__Q9U6Y5 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 45.164 45.461 3 0.013722 51166 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 59.306 54.027 + 48525000 0 0 0 0 0 7284800 0 4833300 6572200 4862400 7974000 8992700 8005300 0 0 51825 110 46532 434858;434859;434860;434861;434862;434863;434864 343738;343739;343740;343741 343738 2 TIFGNLNPVWEEK Unmodified 1545.7827 0.78274359 216 O14795 UNC13B Protein unc-13 homolog B yes yes 0 0 0 By MS/MS 2 0 1 1 91.79 83.66 2 0.011515 108525 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.843 58.237 9887400 9887400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51826 216 46533 434865 343742 343742 1 TIFIISMYK Unmodified 1114.6097 0.60965359 2367 Q14116 IL18 Interleukin-18 yes yes 0 0 0 By MS/MS 10 0 1 1 85.424 85.593 2 0.03116 98896 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.869 31.031 5564100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5564100 51827 2367 46534 434866 343743 343743 1 TIFPHTAGSNK Unmodified 1171.5986 0.59857163 4906 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 2 1 1 1 1 1 1 1 1 26.619 26.805 2;3 0.0053928 27687 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 59.153 26.154 106830000 0 0 0 13073000 5987800 8881000 9785000 11638000 6768100 10088000 8178800 10373000 10820000 2529000 8706200 51828 4906 46535 434867;434868;434869;434870;434871;434872;434873;434874;434875;434876;434877;434878;434879 343744;343745;343746;343747 343747 4 TIFQGIAAK Unmodified 947.54402 0.54401687 1680 P52209 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.64 2.9 1 1 9 1 1 1 1 1 1 1 1 1 1 1 58.18 57.227 2 0.016919 78511 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.469 18.681 1595200000 1289000000 59833000 0 0 0 7617400 0 8904200 8157200 8640200 37697000 34456000 6447900 30148000 104350000 51829 1680 46536 434880;434881;434882;434883;434884;434885;434886;434887;434888;434889;434890 343748;343749;343750;343751 343750 4 TIGDLSTLTASEIK Unmodified 1447.777 0.77698951 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 78.617 77.959 2 1.7382E-72 90250 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 189.13 161.65 546760000 0 232450000 4592900 16668000 21934000 28990000 24199000 19424000 17947000 34071000 24138000 34169000 24513000 27955000 35711000 51830 2804 46537 434891;434892;434893;434894;434895;434896;434897;434898;434899;434900;434901;434902;434903;434904;434905 343752;343753;343754;343755;343756;343757;343758;343759;343760;343761;343762;343763;343764 343753 10 TIGDMFQNQDRNQDGK Unmodified 1865.8326 0.83262368 3744 Q96AY3 FKBP10 Peptidyl-prolyl cis-trans isomerase FKBP10 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 47.667 46.464 3 1.223E-07 50963 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.497 81.392 132450000 10895000 0 16881000 0 0 11568000 0 0 0 12270000 18362000 16080000 0 13079000 33318000 51831 3744 46538 434906;434907;434908;434909;434910;434911;434912;434913;434914 343765;343766;343767;343768;343769;343770;343771;343772 343767 8 TIGDMFQNQDRNQDGK Oxidation (M) 1881.8275 0.8275383 3744 Q96AY3 FKBP10 Peptidyl-prolyl cis-trans isomerase FKBP10 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 35.207 30.376 3 6.9687E-05 38635 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 95.067 88.497 43541000 10301000 16577000 16663000 0 0 0 0 0 0 0 0 0 0 0 0 51832 3744 46538 434915;434916;434917 343773;343774;343775 343775 5322 2 TIGDQLGEAK Unmodified 1030.5295 0.52948901 1994 P81274 GPSM2 G-protein-signaling modulator 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 32.358 32.457 2 0.011165 34841 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 54.722 25.552 41893000 0 0 0 3674800 2743000 4266400 4618900 5809300 3388900 1979300 9516900 5895200 0 0 0 51833 1994 46539 434918;434919;434920;434921;434922;434923;434924;434925;434926 343776;343777;343778;343779 343778 4 TIGGGDDSFNTFFSETGAGK Unmodified 2006.8858 0.88576469 1961;3031;4093 P68363;Q71U36;P0DPH8;P0DPH7;Q6PEY2;Q9BQE3 TUBA1B;TUBA1A;TUBA3E;TUBA1C Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-1C chain no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.24 3.95 1 43 7 56 10 28 13 2 3 6 5 5 6 7 2 5 5 5 5 85.223 83.489 2;3 0 95743 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 281.6 274.23 76847000000 1686500000 28459000000 934820000 900660000 2009100000 3404000000 1809500000 2645900000 2932900000 5670800000 4468400000 8813100000 2651300000 3457300000 7003900000 51834 1961;3031;4093 46540 434927;434928;434929;434930;434931;434932;434933;434934;434935;434936;434937;434938;434939;434940;434941;434942;434943;434944;434945;434946;434947;434948;434949;434950;434951;434952;434953;434954;434955;434956;434957;434958;434959;434960;434961;434962;434963;434964;434965;434966;434967;434968;434969;434970;434971;434972;434973;434974;434975;434976;434977;434978;434979;434980;434981;434982;434983;434984;434985;434986;434987;434988;434989;434990;434991;434992;434993;434994;434995;434996;434997;434998;434999;435000;435001;435002;435003;435004;435005;435006;435007;435008;435009;435010;435011;435012;435013;435014;435015;435016;435017;435018;435019;435020;435021;435022;435023;435024;435025;435026;435027;435028;435029;435030;435031;435032;435033 343780;343781;343782;343783;343784;343785;343786;343787;343788;343789;343790;343791;343792;343793;343794;343795;343796;343797;343798;343799;343800;343801;343802;343803;343804;343805;343806;343807;343808;343809;343810;343811;343812;343813;343814;343815;343816;343817;343818;343819;343820;343821;343822;343823;343824;343825;343826;343827;343828;343829;343830;343831;343832;343833;343834;343835;343836;343837;343838;343839;343840;343841;343842;343843;343844;343845;343846;343847;343848;343849;343850;343851;343852;343853;343854;343855;343856;343857;343858;343859;343860;343861;343862;343863;343864;343865;343866;343867;343868;343869;343870;343871;343872;343873;343874;343875;343876;343877;343878;343879;343880;343881;343882;343883;343884;343885;343886;343887;343888;343889;343890;343891;343892;343893;343894;343895;343896;343897;343898;343899;343900 343825 106 TIGGGDDSFTTFFCETGAGK Unmodified 2066.8891 0.88913551 1962 P68366 TUBA4A Tubulin alpha-4A chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.43 3.14 5 1 24 1 3 2 2 2 2 2 2 2 2 2 2 2 2 2 86.571 85.758 2;3 2.9506E-66 99316 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 196.84 193.97 2332700000 29019000 1849400000 20535000 9806100 18418000 29470000 14781000 26300000 33477000 50477000 47424000 49163000 20878000 26974000 106640000 51835 1962 46541 435034;435035;435036;435037;435038;435039;435040;435041;435042;435043;435044;435045;435046;435047;435048;435049;435050;435051;435052;435053;435054;435055;435056;435057;435058;435059;435060;435061;435062;435063 343901;343902;343903;343904;343905;343906;343907;343908;343909;343910;343911;343912;343913;343914;343915;343916;343917;343918;343919;343920;343921;343922 343907 21 TIGIIGAPFSK Unmodified 1102.6386 0.63864553 794 P05089 ARG1 Arginase-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 78.461 78.479 2 0.0010169 90701 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 75.652 58.876 922370000 0 0 0 274490000 50075000 67221000 54436000 151690000 0 74233000 66777000 111850000 71605000 0 0 51836 794 46542 435064;435065;435066;435067;435068;435069;435070;435071;435072 343923;343924;343925;343926;343927;343928;343929;343930;343931 343927 3 TIGISVDPR Unmodified 956.5291 0.52909508 1203 P26373 RPL13 60S ribosomal protein L13 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.161 52.307 2 0.0052193 59377 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 79.906 42.886 784880000 0 0 0 39458000 48707000 52583000 48692000 46910000 41369000 82914000 73470000 112260000 74441000 67943000 96130000 51837 1203 46543 435073;435074;435075;435076;435077;435078;435079;435080;435081;435082;435083;435084 343932;343933;343934;343935;343936;343937;343938;343939;343940;343941 343937 8 TIGSGEPGVPTK Unmodified 1141.5979 0.59790293 2786 Q5T8P6 RBM26 RNA-binding protein 26 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 33.586 33.771 2 0.0083801 37065 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 68.657 44.702 101380000 0 0 0 8608200 6835000 10221000 7655600 0 6858100 11013000 9926600 15052000 9063000 7210300 8934400 51838 2786 46544 435085;435086;435087;435088;435089;435090;435091;435092;435093;435094;435095 343942;343943;343944;343945;343946;343947 343943 4 TIGTGLVTNTLAMTEEEK Oxidation (M) 1922.9507 0.95067313 1572 P49411 TUFM Elongation factor Tu, mitochondrial yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 77.244 77.346 2 4.4742E-47 89388 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 151.74 120.08 70383000 0 0 0 0 4470200 5335300 0 4026200 4092500 7316000 8163000 9952700 0 7350900 19676000 51839 1572 46545 435096;435097;435098;435099;435100;435101;435102;435103;435104;435105;435106 343948;343949;343950;343951;343952;343953;343954;343955;343956;343957 343952 2523 10 TIHAELSK Unmodified 897.49198 0.4919813 2402 Q14318 FKBP8 Peptidyl-prolyl cis-trans isomerase FKBP8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 17.108 16.455 2 0.012994 22229 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 98.458 34.893 74950000 0 26372000 23159000 0 1614700 2404700 2644800 0 2201500 3175100 0 0 7335100 6043600 0 51840 2402 46546 435107;435108;435109;435110;435111;435112;435113;435114;435115 343958;343959 343958 2 TIIEEQATK Unmodified 1031.5499 0.5498901 3832 Q96F24 NRBF2 Nuclear receptor-binding factor 2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 28.697 24.351 2 0.018683 31887 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.355 13.091 63050000 0 63050000 0 0 0 0 0 0 0 0 0 0 0 0 0 51841 3832 46547 435116;435117 343960 343960 1 TIIFVETK Unmodified 949.54843 0.54843354 3670 Q92841 DDX17 Probable ATP-dependent RNA helicase DDX17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.56 3 2 1 13 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 62.655 61.697 2 0.01026 69499 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 80.229 63.756 442140000 24345000 13751000 14162000 20836000 25516000 28926000 26622000 29382000 22976000 41344000 32911000 36998000 48326000 35046000 40995000 51842 3670 46548 435118;435119;435120;435121;435122;435123;435124;435125;435126;435127;435128;435129;435130;435131;435132;435133 343961;343962;343963;343964;343965;343966;343967;343968;343969;343970;343971;343972;343973;343974;343975 343973 15 TIIGDFQK Unmodified 920.49673 0.49673232 3732 Q96A49 SYAP1 Synapse-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53.608 52.527 2 0.0047759 59419 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 113.7 73.593 3400400000 39638000 567070000 79489000 143840000 149990000 161130000 243250000 164240000 145050000 242160000 293280000 226820000 276510000 215130000 452780000 51843 3732 46549 435134;435135;435136;435137;435138;435139;435140;435141;435142;435143;435144;435145;435146;435147;435148 343976;343977;343978;343979;343980;343981;343982;343983;343984;343985;343986;343987;343988;343989;343990;343991;343992;343993;343994 343979 19 TIIIQHENIFPSPR Unmodified 1663.9046 0.90459006 451 O75044 SRGAP2 SLIT-ROBO Rho GTPase-activating protein 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 74.109 74.258 3 0.00038995 85563 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 65.472 54.366 27365000 0 0 0 0 0 4545000 5376700 0 4343900 5377800 3287300 4434600 0 0 0 51844 451 46550 435149;435150;435151;435152;435153;435154 343995;343996;343997 343995 3 TIILFTK Unmodified 834.52149 0.52149051 4919 Q9UI26 IPO11 Importin-11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.879 69.956 2 0.034305 79306 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.342 6.585 63116000 0 0 0 3299300 2501100 7992300 3362300 4231100 2751400 7195200 6320800 5610800 4555900 5136200 10160000 51845 4919 46551 435155;435156;435157;435158;435159;435160;435161;435162;435163;435164;435165;435166 343998;343999 343998 2 TIIPLATAPNVQQIQVPGSK Unmodified 2074.1786 0.17863965 2893 Q6MZP7 LIN54 Protein lin-54 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 2 2 2 2 2 2 86.119 86.226 2;3 0.00070805 99766 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.12 38.41 93221000 0 0 0 0 5661400 7990400 4150400 6429400 6719200 12809000 7692900 12548000 5878600 6552300 16790000 51846 2893 46552 435167;435168;435169;435170;435171;435172;435173;435174;435175;435176;435177;435178;435179;435180;435181;435182;435183;435184;435185;435186;435187;435188 344000;344001;344002;344003;344004;344005;344006 344002 6 TIIPLISQCTPK Unmodified 1369.7639 0.7639224 1423 P40926 MDH2 Malate dehydrogenase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 84.011 78.889 2 0.0071116 100528 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.693 66.239 331400000 162330000 160630000 8444500 0 0 0 0 0 0 0 0 0 0 0 0 51847 1423 46553 435189;435190;435191 344007;344008;344009 344008 3 TIIQNPTDQQK Unmodified 1284.6674 0.66737948 5067 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.05 3.87 1 5 1 12 1 5 1 1 1 1 1 1 1 1 1 1 1 1 1 33.506 32.441 2 9.2872E-18 41568 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 179.37 167.88 2846500000 119030000 2202100000 8024500 16309000 9351000 16953000 15272000 12776000 11554000 18729000 77579000 74811000 18222000 45053000 200690000 51848 5067 46554 435192;435193;435194;435195;435196;435197;435198;435199;435200;435201;435202;435203;435204;435205;435206;435207;435208;435209;435210 344010;344011;344012;344013;344014;344015;344016;344017;344018;344019;344020;344021;344022;344023;344024;344025;344026;344027;344028;344029;344030;344031;344032;344033;344034;344035 344015 25 TILANGALR Unmodified 927.55016 0.55016488 1598 P49770 EIF2B2 Translation initiation factor eIF-2B subunit beta yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 45.97 46.206 2 0.029013 52360 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 48.756 23.757 39683000 0 0 0 3100500 0 6145000 3077000 0 0 5371400 4477900 6534700 0 3881100 7095000 51849 1598 46555 435211;435212;435213;435214;435215;435216;435217;435218 344036;344037;344038 344036 3 TILATGELGTLTNVYK Unmodified 1692.9298 0.92980175 5134 Q9Y315 DERA Deoxyribose-phosphate aldolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.17 3.85 2 1 3 2 1 1 1 1 87.027 84.975 2 9.7519E-42 105847 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 174.68 147.89 154040000 0 137370000 6631900 0 0 0 0 0 0 3820300 0 0 0 0 6217200 51850 5134 46556 435219;435220;435221;435222;435223;435224 344039;344040;344041;344042;344043;344044;344045;344046 344040 8 TILDEGDEVK Unmodified 1117.5503 0.55028404 3638 Q92613 JADE3 Protein Jade-3 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 42.458 42.797 2 0.0088751 46650 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 58.981 41.585 72975000 0 0 0 0 0 5182400 0 0 0 14769000 18211000 21206000 6818500 6787900 0 51851 3638 46557 435225;435226;435227;435228;435229;435230;435231 344047;344048;344049;344050;344051 344050 5 TILDPLTLVQGNQNEDK Unmodified 1896.9793 0.97927114 2835 Q5W0B1 RNF219 RING finger protein 219 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 2 2 1 2 1 2 2 2 1 1 2 88.495 88.573 2;3 1.0907E-09 102808 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 111.79 83.616 74432000 0 0 0 1429000 3768100 6290700 2830800 5137000 6036100 9477100 8163500 9152900 3618600 4061800 14467000 51852 2835 46558 435232;435233;435234;435235;435236;435237;435238;435239;435240;435241;435242;435243;435244;435245;435246;435247;435248;435249;435250 344052;344053;344054;344055;344056;344057;344058;344059;344060;344061;344062;344063;344064;344065;344066 344054 15 TILEEEITPTIQK Unmodified 1513.8239 0.8239397 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.16 3.73 5 2 12 1 5 1 1 1 1 1 1 1 1 1 1 1 1 1 74.831 73.433 2;3 2.7243E-62 84460 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 218.52 190.51 2833800000 24416000 2100500000 19570000 25788000 39512000 68458000 45913000 39783000 34835000 64414000 72679000 81507000 46011000 61516000 108870000 51853 643 46559 435251;435252;435253;435254;435255;435256;435257;435258;435259;435260;435261;435262;435263;435264;435265;435266;435267;435268;435269 344067;344068;344069;344070;344071;344072;344073;344074;344075;344076;344077;344078;344079;344080;344081;344082;344083;344084;344085;344086;344087;344088;344089 344075 22 TILESNDVPGMLAYSLK Oxidation (M) 1865.9445 0.94446554 4011 Q99460 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 82.978 82.272 2 2.1729E-46 101688 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.02 121.64 321520000 0 193940000 5317400 1657800 9104400 12420000 0 3440600 0 31759000 23281000 29275000 0 0 11327000 51854 4011 46560 435270;435271;435272;435273;435274;435275;435276;435277;435278;435279;435280 344090;344091;344092;344093;344094;344095;344096;344097;344098;344099;344100 344092 5504 11 TILESNDVPGMLAYSLK Unmodified 1849.9496 0.94955092 4011 Q99460 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.8 3.12 3 1 1 1 2 1 1 91.933 88.211 2 2.7224E-57 110447 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 194.3 182.76 306450000 6016600 293900000 3247200 0 0 0 0 0 0 3290700 0 0 0 0 0 51855 4011 46560 435281;435282;435283;435284;435285 344101;344102;344103;344104;344105 344102 5 TILGAGPVLEAFGNAK Unmodified 1556.8562 0.85624288 2295 Q13459 MYO9B Unconventional myosin-IXb yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 88.138 88.273 2 0.00041713 102172 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.121 38.735 19608000 0 0 0 0 0 2538800 0 1329600 1912300 6322900 0 0 0 2526700 4977300 51856 2295 46561 435286;435287;435288;435289;435290;435291 344106;344107;344108;344109;344110 344108 5 TILLNTK Unmodified 801.496 0.49600404 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39.989 39.071 2 0.021122 50504 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.63 25.368 3025600000 180220000 105280000 21957000 232630000 183530000 263820000 216300000 148270000 163090000 286350000 280010000 276000000 189730000 170930000 307480000 51857 1518 46562 435292;435293;435294;435295;435296;435297;435298;435299;435300;435301;435302;435303;435304;435305;435306 344111;344112;344113;344114;344115;344116;344117;344118;344119;344120;344121;344122;344123;344124;344125 344115 6 TILMMGR 2 Oxidation (M) 852.41974 0.41974433 980 P13639 EEF2 Elongation factor 2 yes yes 0 2 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 1 1 1 1 1 2 3 2 2 3 2 22.828 23.103 2 0.034585 23320 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.066 24.261 378590000 0 0 0 18844000 4975000 8038500 7441900 6001400 5360600 23287000 78451000 54925000 18993000 63205000 89063000 51858 980 46563 435307;435308;435309;435310;435311;435312;435313;435314;435315;435316;435317;435318;435319;435320;435321;435322;435323;435324;435325;435326;435327 344126;344127;344128;344129;344130;344131;344132;344133;344134 344128 1318 8 TILMMGR Oxidation (M) 836.42483 0.42482971 980 P13639 EEF2 Elongation factor 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 1 1 1 1 3 2 3 3 3 40.968 41.217 2 0.017898 50451 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 77.748 45.278 592880000 0 0 0 27952000 15244000 0 11127000 15743000 8233300 13008000 88831000 67833000 49258000 81802000 213850000 51859 980 46563 435328;435329;435330;435331;435332;435333;435334;435335;435336;435337;435338;435339;435340;435341;435342;435343;435344;435345;435346;435347;435348;435349 344135;344136;344137;344138 344138 1318 4 TILMMGR Unmodified 820.42992 0.42991509 980 P13639 EEF2 Elongation factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 52.516 53.01 2 0.02139 58847 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 106.76 76.576 301820000 0 0 0 0 0 0 0 0 0 0 44161000 39325000 0 39360000 178980000 51860 980 46563 435350;435351;435352;435353 344139;344140;344141;344142 344139 4 TILNLENSNK Unmodified 1144.6088 0.60880197 3255 Q8IX12 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49.431 48.938 2 1.2569E-09 54086 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 143.37 72.849 1257100000 0 20211000 24194000 50996000 52721000 85568000 89766000 84305000 99196000 109950000 115030000 125460000 125300000 115590000 158800000 51861 3255 46564 435354;435355;435356;435357;435358;435359;435360;435361;435362;435363;435364;435365;435366;435367 344143;344144;344145;344146;344147;344148;344149;344150;344151;344152;344153;344154;344155;344156;344157 344152 9 TILPAAAQDVYYR Unmodified 1479.7722 0.7721789 788 P04843 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 0 0 0 By MS/MS 10 0 1 1 74.806 74.959 2 0.028633 86327 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 41.689 12.138 2742000 0 0 0 0 0 0 2742000 0 0 0 0 0 0 0 0 51862 788 46565 435368 344158 344158 1 TILQGSSEGTGLSALLPQPK Unmodified 1996.0841 0.084070566 3653 Q92733 PRCC Proline-rich protein PRCC yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.04 2.54 2 1 21 3 2 2 2 2 2 2 2 2 1 2 2 87.107 86.66 2;3 5.351E-11 100559 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 106.17 97.661 273350000 0 36723000 0 0 10387000 9588700 6346200 12416000 15495000 28472000 26867000 22049000 4868500 19487000 80647000 51863 3653 46566 435369;435370;435371;435372;435373;435374;435375;435376;435377;435378;435379;435380;435381;435382;435383;435384;435385;435386;435387;435388;435389;435390;435391;435392 344159;344160;344161;344162;344163;344164;344165;344166;344167;344168;344169;344170;344171;344172;344173;344174;344175;344176;344177;344178;344179;344180 344178 22 TILSLMTR Oxidation (M) 949.52665 0.52665224 1714 P53396 ACLY ATP-citrate synthase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 2 2 2 2 2 2 2 2 2 1 54.605 54.695 2 0.0054464 62800 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 86.794 57.456 6041900000 0 0 0 205150000 363720000 322660000 1555300000 1184400000 1172500000 279910000 351330000 580830000 0 0 26058000 51864 1714 46567 435393;435394;435395;435396;435397;435398;435399;435400;435401;435402;435403;435404;435405;435406;435407;435408;435409;435410;435411 344181;344182;344183;344184;344185;344186;344187;344188;344189;344190;344191;344192;344193;344194;344195;344196;344197;344198;344199;344200;344201 344186 2788 20 TILSLMTR Unmodified 933.53174 0.53173762 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.153 75.212 2 0.004651 86543 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 109.86 60.504 5353300000 0 0 0 120800000 268240000 284730000 932680000 1330200000 1226400000 254310000 304020000 494870000 11050000 26138000 99823000 51865 1714 46567 435412;435413;435414;435415;435416;435417;435418;435419;435420;435421;435422;435423 344202;344203;344204;344205;344206;344207;344208;344209;344210;344211;344212;344213;344214;344215;344216 344209 15 TILSLMTREK Unmodified 1190.6693 0.66929373 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 65.288 65.46 3 0.030679 74632 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 31.597 22.593 5671100 0 0 0 0 0 0 0 1788900 3882200 0 0 0 0 0 0 51866 1714 46568 435424;435425 344217 344217 1 TILSNQTVDIPENVDITLK Unmodified 2112.1314 0.13141469 1326 P32969 RPL9 60S ribosomal protein L9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.09 3.73 5 2 4 1 5 1 2 2 88.787 85.962 2;3 1.575E-13 106537 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.334 66.834 1183700000 9358600 1155100000 5691600 0 0 0 0 0 0 7251500 6378400 0 0 0 0 51867 1326 46569 435426;435427;435428;435429;435430;435431;435432;435433;435434;435435;435436 344218;344219;344220;344221;344222;344223;344224;344225;344226;344227;344228 344219 10 TILTLTGVSTLGDVK Unmodified 1516.8712 0.87122424 23 A6NDG6 PGP Phosphoglycolate phosphatase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.62 3.61 7 2 4 3 4 2 1 1 1 1 88.631 85.4 2;3 3.1185E-38 108500 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 138.45 120.58 2183900000 732640000 1314800000 78052000 0 0 0 0 0 0 0 9912100 10916000 0 7501200 30009000 51868 23 46570 435437;435438;435439;435440;435441;435442;435443;435444;435445;435446;435447;435448;435449 344229;344230;344231;344232;344233;344234;344235;344236;344237;344238;344239;344240;344241;344242 344236 11 TIMHLMINNTK Unmodified 1314.6788 0.67881256 1630 P50570;Q05193 DNM2;DNM1 Dynamin-2;Dynamin-1 yes no 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 59.35 58.577 3 0.0002636 65146 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 86.114 77.047 138290000 9095100 0 0 0 0 12123000 5490600 12386000 0 0 16883000 18626000 0 8140300 55547000 51869 1630 46571 435450;435451;435452;435453;435454;435455;435456;435457;435458 344243;344244;344245;344246;344247 344247 5 TIMVDDSK Unmodified 907.43208 0.43208315 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 23.194 23.191 2 0.018722 24333 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 64.207 7.6604 35664000 0 0 0 0 4745800 11362000 7463900 6733600 5359400 0 0 0 0 0 0 51870 5187 46572 435459;435460;435461;435462;435463 344248;344249;344250 344248 3 TIMVDDSK Oxidation (M) 923.427 0.42699778 5187 Q9Y490 TLN1 Talin-1 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 17.415 13.515 2 0.021221 17847 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.296 58.277 86143000 6838700 79305000 0 0 0 0 0 0 0 0 0 0 0 0 0 51871 5187 46572 435464;435465 344251 344251 1 TINEVENQILTR Unmodified 1428.7573 0.75725712 356;971 O43707;P12814 ACTN4;ACTN1 Alpha-actinin-4;Alpha-actinin-1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 1 1 2 2 2 2 2 2 66.97 67.045 2;3 5.4625E-09 75955 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 141.89 120.42 645960000 0 0 0 18751000 13751000 42590000 21076000 19864000 13045000 30917000 91129000 94412000 27478000 57606000 215340000 51872 356;971 46573 435466;435467;435468;435469;435470;435471;435472;435473;435474;435475;435476;435477;435478;435479;435480;435481;435482;435483;435484;435485;435486;435487 344252;344253;344254;344255;344256;344257;344258;344259;344260;344261;344262;344263;344264;344265;344266 344256 13 TINLTDRQVK Unmodified 1186.667 0.66698555 4741 Q9NYD6 HOXC10 Homeobox protein Hox-C10 yes yes 0 0 1 By MS/MS By matching By MS/MS 2 0 3 1 1 1 38.439 33.447 3 0.0044258 46523 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.379 37.461 47359000 32225000 10891000 4242500 0 0 0 0 0 0 0 0 0 0 0 0 51873 4741 46574 435488;435489;435490 344267 344267 1 TINLYPLTNYTFGTK Unmodified 1744.9036 0.903587 369 O43809 NUDT21 Cleavage and polyadenylation specificity factor subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 2 89.039 89.15 2;3 1.6197E-14 103447 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 123.84 92.609 131870000 0 0 0 0 2337100 4964100 2940000 9129300 5212300 15961000 10920000 10870000 3658200 7381100 58500000 51874 369 46575 435491;435492;435493;435494;435495;435496;435497;435498;435499;435500;435501;435502 344268;344269;344270;344271;344272;344273;344274;344275;344276;344277;344278;344279;344280 344276 13 TINPQVSK Unmodified 885.49198 0.4919813 2265 Q13296 SCGB2A2 Mammaglobin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 17.778 17.957 2 0.033128 18441 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 99.139 59.036 490820000 0 0 0 81133000 43741000 54760000 28457000 30561000 16485000 29121000 55957000 54218000 0 51136000 45250000 51875 2265 46576 435503;435504;435505;435506;435507;435508;435509;435510;435511;435512;435513 344281;344282;344283;344284;344285;344286;344287;344288 344288 3 TINPQVSKTEYK Unmodified 1406.7405 0.74054442 2265 Q13296 SCGB2A2 Mammaglobin-A yes yes 0 0 1 By MS/MS 10 0 1 1 27.785 27.81 3 0.0025149 29923 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 59.57 55.226 7131000 0 0 0 0 0 0 7131000 0 0 0 0 0 0 0 0 51876 2265 46577 435514 344289 344289 1 TINQIRQDAVK Unmodified 1284.715 0.71499837 1974 P78344 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 3 24 1 1 1 2 2 2 2 2 2 2 2 2 2 2 2 28.586 28.232 2;3 3.7553E-12 30314 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 140.09 90.373 3211400000 353170000 55675000 24361000 138520000 170340000 215330000 258390000 175840000 203970000 250950000 306920000 249530000 292210000 258340000 257910000 51877 1974 46578 435515;435516;435517;435518;435519;435520;435521;435522;435523;435524;435525;435526;435527;435528;435529;435530;435531;435532;435533;435534;435535;435536;435537;435538;435539;435540;435541 344290;344291;344292;344293;344294;344295;344296;344297;344298;344299;344300;344301;344302;344303;344304;344305;344306;344307;344308;344309;344310;344311;344312 344307 10 TINSDISIPEYK Unmodified 1378.698 0.6980109 518 O75556 SCGB2A1 Mammaglobin-B yes yes 0 0 0 By MS/MS 10 0 1 1 68.492 68.611 2 0.0015191 78660 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 67.214 48.903 15259000 0 0 0 0 0 0 0 0 0 15259000 0 0 0 0 0 51878 518 46579 435542 344313 344313 1 TIPGDTAWLLYDTYGFPVDLTGLIAEEK Unmodified 3097.5536 0.55358508 1578 P49588 AARS Alanine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 102.81 96.968 3 0.00066002 122292 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 32.962 27.643 11062000 9113300 1948800 0 0 0 0 0 0 0 0 0 0 0 0 0 51879 1578 46580 435543;435544 344314;344315 344315 2 TIPGTALVEMGDEYAVER Oxidation (M) 1965.9354 0.93535742 3567 Q8WVV9 HNRNPLL Heterogeneous nuclear ribonucleoprotein L-like yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 77.929 78.035 2 2.8942E-06 90150 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 76.588 62.027 66348000 0 0 0 0 4330200 5404800 3367100 5306000 5787400 11125000 7493700 8915800 3204300 4450900 6962500 51880 3567 46581 435545;435546;435547;435548;435549;435550;435551;435552;435553;435554;435555 344316;344317;344318;344319;344320;344321;344322;344323;344324;344325;344326 344317 5057 11 TIPIDGDFFSYTR Unmodified 1530.7355 0.73545904 796 P05091 ALDH2 Aldehyde dehydrogenase, mitochondrial yes yes 0 0 0 By MS/MS 10 0 1 1 86.077 86.271 2 0.022766 99962 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 51.092 41.903 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51881 796 46582 435556 344327 344327 1 TIPLTDNTVIEEHLGK Unmodified 1778.9414 0.94142907 2871 Q6DKI1 RPL7L1 60S ribosomal protein L7-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 76.282 75.711 3 9.6514E-05 94192 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.12 64.539 170050000 0 58086000 5873600 0 5990100 0 5992900 7850300 0 15720000 9575200 13844000 11433000 11966000 23717000 51882 2871 46583 435557;435558;435559;435560;435561;435562;435563;435564;435565;435566;435567;435568 344328;344329;344330;344331;344332;344333;344334;344335;344336;344337;344338;344339 344331 12 TIPNDPGFVVTLSNR Unmodified 1628.8522 0.85222014 3702 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 2 2 2 1 2 1 2 80.277 80.329 2;3 3.599E-07 92904 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 106.01 93.948 220360000 0 0 0 4895800 11084000 21432000 10559000 11132000 15146000 27520000 26869000 21505000 14193000 13242000 42781000 51883 3702 46584 435569;435570;435571;435572;435573;435574;435575;435576;435577;435578;435579;435580;435581;435582;435583;435584;435585;435586;435587;435588;435589;435590 344340;344341;344342;344343;344344;344345;344346;344347;344348;344349;344350;344351 344346 10 TIPNVIISHR Unmodified 1148.6666 0.66659162 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching 10 0 5 1 1 1 1 1 52.938 52.93 3 0.046608 60051 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 38.875 31.612 108420000 0 0 0 15982000 0 0 19809000 21461000 20709000 0 0 0 0 30455000 0 51884 5189 46585 435591;435592;435593;435594;435595 344352;344353 344352 0 TIPSLTSTSTPLR Unmodified 1372.7562 0.75619449 3132 Q86T82 USP37 Ubiquitin carboxyl-terminal hydrolase 37 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching 10 0 6 1 1 1 1 1 1 68.145 68.261 2 0.0027437 78274 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 57.174 39.31 13292000 0 0 0 0 1309600 0 2092300 0 0 2774700 3643200 0 0 0 3472700 51885 3132 46586 435596;435597;435598;435599;435600;435601 344354;344355;344356 344354 3 TIPTQQPPTK Unmodified 1109.6081 0.60807369 2730 Q5HYK7 SH3D19 SH3 domain-containing protein 19 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 24.191 24.406 2 0.021799 25612 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 46.457 23.386 32468000 0 0 0 4137500 1911600 0 4665000 0 0 0 0 6827800 3802500 4051500 7071800 51886 2730 46587 435602;435603;435604;435605;435606;435607;435608 344357;344358;344359 344358 3 TIPVLQVK Unmodified 896.5695 0.56950333 2429 Q14678 KANK1 KN motif and ankyrin repeat domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.652 63.745 2 0.03202 73025 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 54.571 34.649 80941000 0 0 0 3412700 4239500 6479100 5351900 5706000 4701100 7276900 8629000 9758400 8190300 5894600 11301000 51887 2429 46588 435609;435610;435611;435612;435613;435614;435615;435616;435617;435618;435619;435620 344360;344361 344361 2 TIPVQAFEVK Unmodified 1130.6336 0.63356015 276 O15357 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72.909 72.426 2 0.0031586 90767 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.431 87.2 441570000 0 225490000 9372500 11276000 11142000 18356000 14893000 20522000 11573000 22674000 16695000 16746000 19013000 13883000 29928000 51888 276 46589 435621;435622;435623;435624;435625;435626;435627;435628;435629;435630;435631;435632;435633;435634 344362;344363;344364;344365;344366;344367;344368;344369;344370;344371;344372;344373;344374;344375 344365 14 TIPWLEDRVPQK Unmodified 1480.8038 0.80381338 356 O43707 ACTN4 Alpha-actinin-4 yes yes 0 0 1 By matching By matching By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 73.1 73.349 3 0.0011882 83914 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.179 45.439 58056000 0 0 0 0 0 0 0 5574900 2868600 0 8400800 9938300 0 0 31273000 51889 356 46590 435635;435636;435637;435638;435639 344376;344377;344378 344376 3 TIQAHEGFVR Unmodified 1156.5989 0.59890598 4657 Q9NV06 DCAF13 DDB1- and CUL4-associated factor 13 yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.398 30.587 3 0.013059 33246 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 38.875 30.987 70385000 0 0 0 4666300 4159800 7831800 6682800 3946800 3225300 9378600 6964800 7671700 6091300 4368600 5396900 51890 4657 46591 435640;435641;435642;435643;435644;435645;435646;435647;435648;435649;435650;435651 344379 344379 1 TIQAPTQVPVVVSPR Unmodified 1590.9093 0.90934108 1322 P32519 ELF1 ETS-related transcription factor Elf-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 74.495 74.53 2 0.00064133 86238 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 71.176 56.032 92681000 0 0 0 7069300 6777500 7519000 7874300 0 6517700 9840000 0 13469000 10212000 9004000 14398000 51891 1322 46592 435652;435653;435654;435655;435656;435657;435658;435659;435660;435661 344380;344381;344382;344383;344384;344385;344386;344387;344388;344389;344390 344386 11 TIQDGDSDELTIK Unmodified 1433.6886 0.68856843 5193 Q9Y4C1 KDM3A Lysine-specific demethylase 3A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.582 48.741 2 5.6302E-08 54784 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 101.93 87.722 211370000 0 0 0 14260000 14308000 20268000 12755000 15616000 13763000 19830000 21960000 22202000 16086000 17185000 23133000 51892 5193 46593 435662;435663;435664;435665;435666;435667;435668;435669;435670;435671;435672;435673 344391;344392;344393;344394;344395;344396;344397;344398;344399;344400;344401;344402;344403 344396 13 TIQEMQQK Unmodified 1004.4961 0.4960804 356 O43707 ACTN4 Alpha-actinin-4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14.593 14.324 2 0.0048222 13711 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 113.89 39.554 1322200000 0 907070000 4810500 19653000 9310900 32432000 13894000 16679000 8613100 27804000 61857000 44736000 23852000 57893000 93607000 51893 356 46594 435674;435675;435676;435677;435678;435679;435680;435681;435682;435683;435684;435685;435686;435687 344404;344405;344406;344407;344408;344409;344410;344411;344412;344413;344414;344415;344416;344417 344410 13 TIQEMQQK Oxidation (M) 1020.491 0.49099502 356 O43707 ACTN4 Alpha-actinin-4 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.54 3.71 1 2 1 9 2 2 1 1 1 1 1 1 1 1 1 14.014 13.761 2 0.0028491 3352 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 111.82 57.611 1033900000 171840000 729140000 0 0 753190 0 8734400 5060300 5016100 727030 27557000 0 9756500 20940000 54393000 51894 356 46594 435688;435689;435690;435691;435692;435693;435694;435695;435696;435697;435698;435699;435700 344418;344419;344420;344421;344422;344423;344424;344425;344426;344427;344428 344420 454 11 TIQESSNLNEEDTGVTNR Unmodified 2005.9189 0.91885573 2776 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 40.426 40.714 2 8.3951E-20 45547 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 120.14 114.53 32518000 0 0 0 0 2313200 3474700 0 0 0 4864800 3797100 6803300 3646100 0 7618800 51895 2776 46595 435701;435702;435703;435704;435705;435706;435707 344429;344430;344431;344432 344429 4 TIQESSNLNEEDTGVTNRDLISR Unmodified 2590.2471 0.24706616 2776 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 58.724 58.867 3 0.00010435 67138 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 41.711 33.999 20786000 0 0 0 0 2411000 0 2819900 0 0 4198300 4036400 4477100 0 2843000 0 51896 2776 46596 435708;435709;435710;435711;435712;435713 344433;344434;344435;344436;344437 344433 4 TIQFVDWCPTGFK Unmodified 1597.7599 0.75989966 3031;4093 Q71U36;P0DPH8;P0DPH7;Q6PEY2;Q9NY65;Q9BQE3 TUBA1A;TUBA3E;TUBA8;TUBA1C Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-8 chain;Tubulin alpha-1C chain no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 87.609 87.71 2 4.7087E-05 101478 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.596 77.767 40326000 0 0 0 0 1042900 2344700 0 3047500 3160400 6158800 3531000 4070500 1646200 2802300 12522000 51897 3031;4093 46597 435714;435715;435716;435717;435718;435719;435720;435721;435722;435723 344438;344439;344440;344441;344442;344443;344444;344445;344446 344440 8 TIQGDEEDLR Unmodified 1174.5466 0.54659564 1750 P54920 NAPA Alpha-soluble NSF attachment protein yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 30.586 29.716 2 0.0023779 32585 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 84.213 61.141 450890000 6239600 274360000 0 11659000 6897100 11610000 9804700 12837000 8554000 14727000 20775000 19169000 17597000 16095000 20562000 51898 1750 46598 435724;435725;435726;435727;435728;435729;435730;435731;435732;435733;435734;435735;435736;435737;435738 344447;344448;344449;344450;344451;344452;344453;344454;344455;344456;344457;344458 344449 12 TIQGHLQSENFK Unmodified 1400.7048 0.70482762 244 O15042 U2SURP U2 snRNP-associated SURP motif-containing protein yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 1 2 2 2 2 2 1 2 2 35.548 35.736 2;3 0.038309 37989 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 31.35 25.213 178960000 0 0 0 10699000 1965400 19803000 11160000 15404000 0 21572000 20819000 0 5192900 20990000 51350000 51899 244 46599 435739;435740;435741;435742;435743;435744;435745;435746;435747;435748;435749;435750;435751;435752;435753;435754;435755 344459;344460 344459 1 TIQLYSVK Unmodified 950.54368 0.54368251 5047 Q9UP83 COG5 Conserved oligomeric Golgi complex subunit 5 yes yes 0 0 0 By MS/MS 3 0 1 1 58.784 53.947 2 0.046406 66473 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 67.981 21.61 2779200 0 2779200 0 0 0 0 0 0 0 0 0 0 0 0 0 51900 5047 46600 435756 344461 344461 1 TIQMGSFR Unmodified 938.46439 0.46438634 5095 Q9Y2B0 CNPY2 Protein canopy homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 48.468 48.64 2 0.006389 53859 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 101.28 70.615 156010000 0 0 0 5312700 4176900 0 5156700 5304300 0 8068700 23435000 20321000 5533300 21676000 57022000 51901 5095 46601 435757;435758;435759;435760;435761;435762;435763;435764;435765;435766 344462;344463;344464;344465;344466;344467;344468 344465 7 TIQMGSFR Oxidation (M) 954.4593 0.45930096 5095 Q9Y2B0 CNPY2 Protein canopy homolog 2 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 24.606 25.147 2 0.025927 26419 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 50.703 32.668 39969000 0 0 0 0 0 0 0 0 0 0 8846000 9516900 0 6228000 15378000 51902 5095 46601 435767;435768;435769;435770 344469 344469 1 TIQNNFFDSSK Unmodified 1299.6095 0.60953025 327 O43426 SYNJ1 Synaptojanin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 55.541 55.815 2 0.021002 62556 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 54.539 46.007 11159000 0 0 0 0 0 0 2554200 2076700 0 0 0 0 0 2439600 4088600 51903 327 46602 435771;435772;435773;435774 344470 344470 1 TIQNSSVSPTSSSSSSSSTGETQTQSSSR Unmodified 2891.2864 0.28642437 3091 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 26.62 26.816 3 8.4694E-20 28490 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 64.315 61.738 46046000 0 0 0 0 3700800 4561300 4388200 0 3426300 6478300 6145500 0 5337100 4031600 7977500 51904 3091 46603 435775;435776;435777;435778;435779;435780;435781;435782;435783 344471;344472;344473;344474;344475;344476;344477;344478;344479 344476 9 TIQPDLNGFIPGSAAK Unmodified 1627.857 0.85697116 3791 Q96D71 REPS1 RalBP1-associated Eps domain-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 85.33 80.586 2 0.027178 100059 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 39.111 27.898 70748000 0 70748000 0 0 0 0 0 0 0 0 0 0 0 0 0 51905 3791 46604 435784 344480 344480 1 TIQPPFVPTLCGPADLR Unmodified 1880.9819 0.9818541 2938 Q6P5Z2 PKN3 Serine/threonine-protein kinase N3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 89.508 89.611 2 0.0030088 103972 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 32.062 17.501 18173000 0 0 0 0 1426100 1235300 0 1881300 1258500 2016800 1878200 2777200 0 1511600 4187500 51906 2938 46605 435785;435786;435787;435788;435789;435790;435791;435792;435793 344481;344482;344483;344484;344485 344482 5 TIQRPVTMGDEGGLR Oxidation (M) 1644.8254 0.82535346 2411 Q14527 HLTF Helicase-like transcription factor yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 33.618 33.672 3 0.0002907 36986 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 61.265 49.496 103970000 0 0 0 0 15377000 15496000 0 20496000 12240000 24502000 0 0 0 15862000 0 51907 2411 46606 435794;435795;435796;435797;435798;435799 344486;344487;344488 344486 3964 3 TIQRPVTMGDEGGLR Unmodified 1628.8304 0.83043884 2411 Q14527 HLTF Helicase-like transcription factor yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.763 45.932 3 7.9075E-27 50636 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 113.59 93.49 170260000 0 0 0 7522900 12027000 11611000 13168000 17410000 11245000 15923000 18784000 13805000 11325000 15158000 22285000 51908 2411 46606 435800;435801;435802;435803;435804;435805;435806;435807;435808;435809;435810;435811 344489;344490;344491;344492;344493;344494;344495;344496;344497;344498;344499;344500 344496 12 TIQRPVTMGDEGGLRR Unmodified 1784.9315 0.93154986 2411 Q14527 HLTF Helicase-like transcription factor yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 2 2 2 1 39.303 39.459 3;4 4.0742E-05 43836 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 79.022 62.623 752030000 0 0 0 39096000 21893000 71733000 33651000 89147000 47053000 64898000 68735000 89008000 70382000 61173000 95262000 51909 2411 46607 435812;435813;435814;435815;435816;435817;435818;435819;435820;435821;435822;435823;435824;435825;435826;435827;435828;435829;435830;435831;435832;435833;435834 344501;344502;344503;344504;344505;344506;344507;344508;344509;344510;344511 344501 8 TIQRPVTMGDEGGLRR Oxidation (M) 1800.9265 0.92646449 2411 Q14527 HLTF Helicase-like transcription factor yes yes 0 1 2 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 28.324 28.497 3 0.0095578 30185 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 43.657 33.283 213640000 0 0 0 16077000 14135000 0 21817000 19026000 17734000 0 0 59325000 34602000 0 30927000 51910 2411 46607 435835;435836;435837;435838;435839;435840;435841;435842 344512 344512 3964 0 TIQTAESLGVPYEQWK Unmodified 1848.9258 0.92577901 433 O60825 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 78.893 79 2 0.00028751 91251 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 87.001 77.679 48818000 0 0 0 0 3163000 5423300 2812100 3742100 4635300 6244900 3623500 7185400 0 3755400 8233000 51911 433 46608 435843;435844;435845;435846;435847;435848;435849;435850;435851;435852 344513;344514 344513 2 TIQVDNTDAEGR Unmodified 1317.6161 0.61607219 1240 P28838 LAP3 Cytosol aminopeptidase yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 26.209 26.535 2 5.3362E-09 28014 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 141.95 81.436 36577000 0 0 0 2836500 0 0 0 1284200 0 1709300 4839700 9282200 1188400 3800200 11636000 51912 1240 46609 435853;435854;435855;435856;435857;435858;435859;435860 344515;344516;344517;344518;344519;344520 344519 6 TIQVENSHLILTGAGALNK Unmodified 1978.0847 0.084739268 2231 Q13085 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 75.006 75.27 3 0.0031317 86340 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.625 30.521 11997000 0 0 0 0 0 0 0 0 0 0 3353300 0 0 0 8643600 51913 2231 46610 435861;435862 344521 344521 1 TIQVLQIEK Unmodified 1070.6336 0.63356015 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.372 64.463 2 0.0030604 74600 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 91.853 44.005 450130000 0 0 0 21515000 24892000 26505000 37079000 35380000 31402000 44825000 40403000 49973000 48355000 29641000 60164000 51914 2556 46611 435863;435864;435865;435866;435867;435868;435869;435870;435871;435872;435873;435874 344522;344523;344524;344525;344526;344527;344528;344529;344530;344531;344532;344533 344532 11 TIQVPQQK Unmodified 940.53418 0.53418046 4243 Q9BY77 POLDIP3 Polymerase delta-interacting protein 3 yes yes 0 0 0 By MS/MS 2 0 1 1 29.639 25.245 2 0.011044 32989 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.61 87.592 29167000 0 29167000 0 0 0 0 0 0 0 0 0 0 0 0 0 51915 4243 46612 435875 344534 344534 1 TIQVSDFVR Unmodified 1063.5662 0.56620887 640 O95302 FKBP9 Peptidyl-prolyl cis-trans isomerase FKBP9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 70.854 70.909 2 0.022744 80655 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.346 21.161 29094000 0 0 0 1739800 0 0 1923600 0 0 0 0 0 3207800 7067900 15155000 51916 640 46613 435876;435877;435878;435879;435880 344535;344536;344537;344538 344536 4 TIRYPDPLIK Unmodified 1214.7023 0.70230842 1905 P62701;Q8TD47 RPS4X;RPS4Y2 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.325 62.423 3 0.001119 70985 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 94.363 63.491 2185400000 0 0 0 116430000 117770000 147330000 153300000 196270000 118740000 183420000 197030000 282810000 199410000 182640000 290200000 51917 1905 46614 435881;435882;435883;435884;435885;435886;435887;435888;435889;435890;435891;435892 344539;344540;344541;344542;344543;344544;344545;344546;344547;344548;344549;344550;344551;344552;344553;344554;344555 344549 17 TISDGTISASK Unmodified 1078.5506 0.55061839 2766 Q5T0N5 FNBP1L Formin-binding protein 1-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 25.022 25.226 2 0.005428 27245 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 59.067 37.604 133820000 0 0 0 8788800 8483800 12228000 9157200 8457000 6001900 15174000 11936000 13270000 10582000 11146000 18591000 51918 2766 46615 435893;435894;435895;435896;435897;435898;435899;435900;435901;435902;435903;435904 344556;344557;344558;344559;344560;344561;344562;344563;344564;344565;344566 344556 11 TISEPDEQRSELPR Unmodified 1655.8115 0.81147753 616 O95049 TJP3 Tight junction protein ZO-3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 36.869 37.012 3 0.0049653 40594 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 38.189 27.555 204390000 0 0 0 22854000 17943000 0 13000000 13100000 15809000 39287000 17460000 19623000 30884000 14428000 0 51919 616 46616 435905;435906;435907;435908;435909;435910;435911;435912;435913;435914 344567;344568 344567 2 TISETIER Unmodified 947.49238 0.49237523 1209 P26639 TARS Threonine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 27.954 28.325 2 0.0053145 29662 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 143.12 44.124 511300000 0 0 0 0 0 18089000 0 0 0 0 141720000 0 0 78744000 272750000 51920 1209 46617 435915;435916;435917;435918 344569;344570;344571;344572 344570 4 TISHVIIGLK Unmodified 1079.6703 0.67028001 5086 Q9Y265 RUVBL1 RuvB-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 58.812 58.285 2 0.00013743 84015 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 151.44 97.473 491770000 47812000 0 0 10729000 9795600 23569000 16931000 19696000 21459000 38287000 35384000 95527000 26133000 20845000 125600000 51921 5086 46618 435919;435920;435921;435922;435923;435924;435925;435926;435927;435928;435929;435930;435931 344573;344574;344575;344576;344577;344578;344579;344580;344581;344582;344583;344584;344585 344578 11 TISIDENMEPSPTGDFYPSPSSPAAGSR Oxidation (M) 2925.2974 0.29744675 174 O00712 NFIB Nuclear factor 1 B-type yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.646 76.7 3 2.196E-21 88628 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 65.581 63.217 265560000 0 0 0 6963900 16342000 18848000 22621000 18031000 23500000 0 35090000 36120000 26438000 26109000 35492000 51922 174 46619 435932;435933;435934;435935;435936;435937;435938;435939;435940;435941;435942 344586;344587;344588;344589;344590;344591;344592;344593;344594;344595;344596 344596 247 11 TISLTDFLAEDGGTGGGSTYVSK Unmodified 2275.0856 0.085586708 1166 P23588 EIF4B Eukaryotic translation initiation factor 4B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.05 3.77 6 2 13 2 4 2 1 1 1 2 2 2 2 2 90.354 88.645 2;3 1.669E-95 106074 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 172 163.29 1157600000 23030000 1024700000 12666000 0 1463800 0 0 1557900 1599000 12642000 15594000 13342000 0 9405100 41528000 51923 1166 46620 435943;435944;435945;435946;435947;435948;435949;435950;435951;435952;435953;435954;435955;435956;435957;435958;435959;435960;435961;435962;435963 344597;344598;344599;344600;344601;344602;344603;344604;344605;344606;344607;344608;344609;344610 344602 12 TISNDDDVQK Unmodified 1133.52 0.52004654 5292 Q9Y6Q9 NCOA3 Nuclear receptor coactivator 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.355 11.469 2 0.0052216 10423 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 69.825 48.377 35835000 0 0 0 3351400 2022200 2706700 3328000 3067700 2530700 3404800 0 4035200 3332600 2840000 5215700 51924 5292 46621 435964;435965;435966;435967;435968;435969;435970;435971;435972;435973;435974 344611;344612;344613 344611 3 TISNGFGFK Unmodified 969.49198 0.4919813 769 P04049 RAF1 RAF proto-oncogene serine/threonine-protein kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 53.956 54.003 2 0.0089253 60703 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 68.214 50.653 44668000 0 0 0 3575600 3417000 5443700 4056100 5274800 5825900 0 9574400 0 0 0 7500300 51925 769 46622 435975;435976;435977;435978;435979;435980;435981;435982;435983 344614;344615;344616;344617;344618;344619;344620 344618 7 TISPEHVIQALESLGFGSYISEVK Unmodified 2603.3483 0.34828376 2060 Q01658 DR1 Protein Dr1 yes yes 0 0 0 By MS/MS 3 0 1 1 101.97 98.409 3 0.0042755 118285 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 30.024 23.071 3730700 0 3730700 0 0 0 0 0 0 0 0 0 0 0 0 0 51926 2060 46623 435984 344621 344621 1 TISPMVMDAK Oxidation (M) 1107.5304 0.53041699 1073 P18206 VCL Vinculin yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.93 3.77 4 2 9 1 4 1 1 1 1 1 1 1 1 1 1 42.494 40.558 2 0.0026819 54253 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.033 72.139 572030000 19419000 462340000 5147200 0 3529700 8128500 7785200 7693200 5184800 10285000 14123000 0 0 10795000 17600000 51927 1073 46624 435985;435986;435987;435988;435989;435990;435991;435992;435993;435994;435995;435996;435997;435998;435999 344622;344623;344624;344625;344626;344627;344628;344629;344630;344631;344632;344633;344634;344635;344636 344629 1540;1541 15 TISPMVMDAK Unmodified 1091.5355 0.53550237 1073 P18206 VCL Vinculin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.6 3.67 3 7 1 1 1 1 1 1 1 1 1 1 55.341 53.585 2 0.0041248 59903 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.985 59.471 1765600000 29013000 1587900000 6825300 0 0 15773000 7199500 0 0 0 25414000 18519000 0 20370000 54584000 51928 1073 46624 436000;436001;436002;436003;436004;436005;436006;436007;436008;436009 344637;344638;344639;344640;344641;344642;344643;344644;344645;344646 344646 10 TISPMVMDAK 2 Oxidation (M) 1123.5253 0.52533161 1073 P18206 VCL Vinculin yes yes 0 2 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 29.588 25.198 2 0.039575 32088 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 59.35 38.05 207450000 11798000 189400000 6251600 0 0 0 0 0 0 0 0 0 0 0 0 51929 1073 46624 436010;436011;436012;436013 344647;344648 344648 1540;1541 2 TISPSTSNNIPLMR Unmodified 1529.7872 0.78717704 587 O94806;Q15139 PRKD3;PRKD1 Serine/threonine-protein kinase D3;Serine/threonine-protein kinase D1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 68.459 68.553 2 0.0010716 78690 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 61.344 41.99 40382000 0 0 0 0 2647300 5494400 0 4031200 3495300 4810200 8720100 7522500 3661400 0 0 51930 587 46625 436014;436015;436016;436017;436018;436019;436020;436021 344649;344650;344651;344652;344653;344654;344655;344656;344657 344651 9 TISPSTSNNIPLMR Oxidation (M) 1545.7821 0.78209166 587 O94806;Q15139 PRKD3;PRKD1 Serine/threonine-protein kinase D3;Serine/threonine-protein kinase D1 yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 53.135 53.789 2 0.00024239 60519 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 74.944 61.988 13714000 0 0 0 0 0 0 0 0 0 0 0 13714000 0 0 0 51931 587 46625 436022;436023;436024;436025;436026 344658;344659;344660;344661;344662 344662 744 5 TISQAVNK Unmodified 859.47633 0.47633123 5094 Q9Y2A7 NCKAP1 Nck-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 12.901 10.112 2 0.020877 13730 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.265 32.966 149310000 0 146680000 2635100 0 0 0 0 0 0 0 0 0 0 0 0 51932 5094 46626 436027;436028 344663;344664;344665 344665 3 TISSDAVLQR Unmodified 1088.5826 0.58258722 2920 Q6P1M3 LLGL2 Lethal(2) giant larvae protein homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 40.569 40.485 2 0.013776 45581 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 51.066 23.541 20251000 0 0 0 4878500 4234300 0 3582300 3530500 0 0 0 0 4025900 0 0 51933 2920 46627 436029;436030;436031;436032;436033 344666;344667;344668 344668 3 TISSEALDILDEACEDK Unmodified 1907.867 0.86700308 2966 Q6R327 RICTOR Rapamycin-insensitive companion of mTOR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 91.542 88.01 2 1.2531E-31 109987 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 142.57 133.84 21119000 0 19603000 1516200 0 0 0 0 0 0 0 0 0 0 0 0 51934 2966 46628 436034;436035;436036;436037 344669;344670;344671 344671 3 TISSSLAVVDLIDAIQPGCINYDLVK Unmodified 2803.4677 0.46774696 986 P13797 PLS3 Plastin-3 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 101.75 97.654 3 6.7465E-31 120735 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.92 95.474 67932000 0 67932000 0 0 0 0 0 0 0 0 0 0 0 0 0 51935 986 46629 436038;436039 344672 344672 1 TISTSDPAEVLVK Unmodified 1358.7293 0.72931103 3147 Q86UE4 MTDH Protein LYRIC yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 7.86 3.4 1 1 5 2 1 1 1 1 1 68.551 67.116 2 0.01126 77030 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 50.452 32.588 327730000 0 281410000 0 5831400 4396800 0 0 0 0 0 10052000 11192000 0 0 14844000 51936 3147 46630 436040;436041;436042;436043;436044;436045;436046 344673;344674;344675;344676 344675 4 TITDEFEQGTYIYFDYEK Unmodified 2261.0052 0.005211122 470 O75175 CNOT3 CCR4-NOT transcription complex subunit 3 yes yes 0 0 0 By MS/MS 2 0 1 1 93.056 84.925 2 2.2884E-08 110082 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 122.45 115.08 8177000 8177000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51937 470 46631 436047 344677 344677 1 TITDVINIGIGGSDLGPLMVTEALK Unmodified 2526.3615 0.36149098 829 P06744 GPI Glucose-6-phosphate isomerase yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 100.89 95.469 3 4.002E-39 119507 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.31 109.74 76118000 19654000 56464000 0 0 0 0 0 0 0 0 0 0 0 0 0 51938 829 46632 436048;436049;436050 344678;344679;344680;344681 344678 4 TITGFQTHTTPVLLAHGER Unmodified 2078.0909 0.090887278 2252 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 2 2 1 2 2 2 2 2 2 2 2 65.388 65.508 3;4 9.6136E-06 74855 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 68.187 64.799 450180000 0 0 0 8582200 9215200 64916000 7456700 19793000 18387000 40084000 62884000 90567000 21183000 24374000 82735000 51939 2252 46633 436051;436052;436053;436054;436055;436056;436057;436058;436059;436060;436061;436062;436063;436064;436065;436066;436067;436068;436069;436070;436071;436072 344682;344683;344684;344685;344686;344687;344688;344689;344690;344691;344692 344691 6 TITGNSAAVITPFK Unmodified 1418.7769 0.77692993 4233 Q9BXS6 NUSAP1 Nucleolar and spindle-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 73.231 72.37 2 2.2548E-29 92821 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 140.39 112.91 299890000 66583000 81948000 0 7325600 8544800 10259000 12064000 11334000 10412000 17439000 13630000 21407000 10264000 9469700 19213000 51940 4233 46634 436073;436074;436075;436076;436077;436078;436079;436080;436081;436082;436083;436084;436085;436086;436087;436088 344693;344694;344695;344696;344697;344698;344699;344700;344701;344702;344703;344704;344705;344706;344707;344708;344709 344700 17 TITLEVEPSDTIENVK Unmodified 1786.92 0.92002493 1933 P62987;P62979;P0CG47;P0CG48 UBA52;RPS27A;UBB;UBC Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.69 3.81 13 47 13 37 21 45 7 4 3 3 4 2 3 3 3 3 3 3 3 83.722 81.502 2;3 0 89935 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 262.56 240.55 92177000000 11414000000 64085000000 860960000 604260000 580500000 647380000 531480000 658540000 500740000 1146700000 2282400000 2295500000 628220000 1783400000 4157500000 51941 1933 46635 436089;436090;436091;436092;436093;436094;436095;436096;436097;436098;436099;436100;436101;436102;436103;436104;436105;436106;436107;436108;436109;436110;436111;436112;436113;436114;436115;436116;436117;436118;436119;436120;436121;436122;436123;436124;436125;436126;436127;436128;436129;436130;436131;436132;436133;436134;436135;436136;436137;436138;436139;436140;436141;436142;436143;436144;436145;436146;436147;436148;436149;436150;436151;436152;436153;436154;436155;436156;436157;436158;436159;436160;436161;436162;436163;436164;436165;436166;436167;436168;436169;436170;436171;436172;436173;436174;436175;436176;436177;436178;436179;436180;436181;436182;436183;436184;436185;436186;436187;436188;436189;436190;436191;436192;436193;436194;436195;436196;436197;436198 344710;344711;344712;344713;344714;344715;344716;344717;344718;344719;344720;344721;344722;344723;344724;344725;344726;344727;344728;344729;344730;344731;344732;344733;344734;344735;344736;344737;344738;344739;344740;344741;344742;344743;344744;344745;344746;344747;344748;344749;344750;344751;344752;344753;344754;344755;344756;344757;344758;344759;344760;344761;344762;344763;344764;344765;344766;344767;344768;344769;344770;344771;344772;344773;344774;344775;344776;344777;344778;344779;344780;344781;344782;344783;344784;344785;344786;344787;344788;344789;344790;344791;344792;344793;344794;344795;344796;344797;344798;344799;344800;344801;344802;344803;344804;344805;344806;344807;344808;344809;344810;344811;344812;344813;344814;344815;344816;344817;344818;344819;344820;344821;344822;344823;344824;344825;344826;344827;344828;344829;344830 344820 115 TITMLDEQK Oxidation (M) 1093.5325 0.53252548 122 O00161 SNAP23 Synaptosomal-associated protein 23 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 31.624 27.177 2 0.021732 35723 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.856 37.306 14130000 0 14130000 0 0 0 0 0 0 0 0 0 0 0 0 0 51942 122 46636 436199;436200 344831 344831 1 TITMLDEQK Unmodified 1077.5376 0.53761086 122 O00161 SNAP23 Synaptosomal-associated protein 23 yes yes 0 0 0 By matching By MS/MS By matching By matching By matching By matching 10 0 6 1 1 1 1 1 1 43.31 43.343 2 0.03575 49225 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 45.972 29.425 25887000 0 0 0 3496300 1819900 0 4714400 1871500 0 0 0 8317300 0 5667800 0 51943 122 46636 436201;436202;436203;436204;436205;436206 344832 344832 1 TITPAHFQLLR Unmodified 1295.735 0.73500553 3915 Q96L91 EP400 E1A-binding protein p400 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.182 71.255 3 0.0035553 81719 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 49.5 37.968 86830000 0 0 0 3619300 3006500 8947500 4934500 8518200 6134400 5784800 6110300 11689000 7108500 6607300 14370000 51944 3915 46637 436207;436208;436209;436210;436211;436212;436213;436214;436215;436216;436217;436218 344833;344834;344835;344836;344837;344838;344839;344840;344841;344842;344843;344844;344845 344835 13 TITPPAAPK Unmodified 894.51747 0.51746776 3755 Q96BD5 PHF21A PHD finger protein 21A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.985 34.168 2 0.018695 37410 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 54.611 24.805 113420000 0 0 0 5798500 7878600 8001900 7869200 10496000 7231000 9076200 11727000 13724000 9254600 10363000 12003000 51945 3755 46638 436219;436220;436221;436222;436223;436224;436225;436226;436227;436228;436229;436230 344846;344847;344848;344849;344850;344851;344852 344848 7 TITQIEEFSDVNEGEK Unmodified 1837.8582 0.85815295 2477 Q15022 SUZ12 Polycomb protein SUZ12 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 72.005 71.062 2 3.8664E-40 88044 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 170.79 155.25 76469000 0 58187000 0 1816500 0 3186600 0 1690500 2162600 4035300 0 0 2515700 2874700 0 51946 2477 46639 436231;436232;436233;436234;436235;436236;436237;436238;436239;436240;436241;436242 344853;344854;344855;344856;344857;344858;344859 344854 7 TITSAATAFVK Unmodified 1108.6128 0.61282471 5099 Q9Y2F5 ICE1 Little elongation complex subunit 1 yes yes 0 0 0 By MS/MS 2 0 1 1 69.633 63.764 2 0.014422 81301 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 63.184 36.047 13685000 0 13685000 0 0 0 0 0 0 0 0 0 0 0 0 0 51947 5099 46640 436243 344860 344860 1 TITSEDVAEMHNILK Oxidation (M) 1715.84 0.84000047 1537 P48426 PIP4K2A Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha yes yes 0 1 0 By MS/MS 2 0 1 1 57.658 53.832 3 0.007064 67227 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 40.278 26.194 5241000 0 0 5241000 0 0 0 0 0 0 0 0 0 0 0 0 51948 1537 46641 436244 344861 344861 2444 1 TITSEDVAEMHNILK Unmodified 1699.8451 0.84508585 1537 P48426 PIP4K2A Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 79.042 75.372 3 0.0016493 91608 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 58.071 49.687 66726000 0 52282000 14445000 0 0 0 0 0 0 0 0 0 0 0 0 51949 1537 46641 436245;436246 344862 344862 1 TITSSYYR Unmodified 989.48181 0.48181054 1911;4338 P62820;Q9H0U4 RAB1A;RAB1B Ras-related protein Rab-1A;Ras-related protein Rab-1B no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.971 31.12 2 0.0059019 33311 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 139.28 118.13 1325100000 0 0 0 79072000 92940000 83175000 118740000 150310000 100570000 143060000 0 191080000 146810000 0 219380000 51950 1911;4338 46642 436247;436248;436249;436250;436251;436252;436253;436254;436255;436256;436257;436258 344863;344864;344865;344866;344867;344868;344869;344870;344871;344872;344873;344874;344875;344876 344873 11 TITSTYYR Unmodified 1003.4975 0.4974606 2512 Q15286 RAB35 Ras-related protein Rab-35 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 32.461 32.559 2 0.0068947 35360 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 91.9 78.903 137650000 0 0 0 11381000 9760700 18987000 13539000 18368000 8632600 14030000 18888000 24063000 0 0 0 51951 2512 46643 436259;436260;436261;436262;436263;436264;436265;436266;436267;436268 344877;344878;344879;344880 344878 4 TITSVAMTSALPIIQK Oxidation (M) 1688.9383 0.93825795 4020 Q99541 PLIN2 Perilipin-2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 1 2 2 2 2 2 2 2 1 2 2 78.87 78.943 2;3 1.8423E-23 90897 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 118.48 90.306 228970000 0 0 0 7481600 8866200 19904000 23770000 21680000 13797000 28831000 16184000 32051000 10423000 20210000 25774000 51952 4020 46644 436269;436270;436271;436272;436273;436274;436275;436276;436277;436278;436279;436280;436281;436282;436283;436284;436285;436286;436287;436288;436289;436290 344881;344882;344883;344884;344885;344886;344887;344888;344889;344890;344891;344892;344893;344894;344895 344886 5526 14 TITSVAMTSALPIIQK Unmodified 1672.9433 0.94334333 4020 Q99541 PLIN2 Perilipin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 85.869 85.976 2 1.3987E-07 99396 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 115.33 97.891 48131000 0 0 0 0 3358000 3599400 1792700 4919100 2755900 3781700 4654200 9252600 2262100 3007300 8747700 51953 4020 46644 436291;436292;436293;436294;436295;436296;436297;436298;436299;436300;436301 344896;344897;344898;344899;344900;344901;344902;344903;344904;344905 344899 10 TITTAYYR Unmodified 987.50255 0.50254598 1824;3689;1649;682 P51153;P20337;Q96E17;P61006;Q92930;O95716 RAB13;RAB3B;RAB3C;RAB8A;RAB8B;RAB3D Ras-related protein Rab-13;Ras-related protein Rab-3B;Ras-related protein Rab-3C;Ras-related protein Rab-8A;Ras-related protein Rab-8B;Ras-related protein Rab-3D no no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 36.387 36.731 2 0.01266 39534 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.127 44.751 183660000 0 0 0 0 0 0 28835000 0 0 35174000 45885000 0 0 32049000 41715000 51954 1649;1824;3689;682 46645 436302;436303;436304;436305;436306 344906;344907 344906 2 TITVALADGGRPDNTGR Unmodified 1712.8806 0.88056015 1578 P49588 AARS Alanine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 49.831 50.081 3 3.0477E-32 55325 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 108.34 100.9 284220000 0 0 0 5729900 0 0 10750000 0 0 24259000 35438000 46781000 17451000 33391000 110420000 51955 1578 46646 436307;436308;436309;436310;436311;436312;436313;436314;436315;436316 344908;344909;344910;344911;344912;344913;344914;344915;344916;344917;344918 344911 11 TITVPVSGSPK Unmodified 1084.6128 0.61282471 3105 Q7Z589 EMSY Protein EMSY yes yes 0 0 0 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 46.835 46.817 2 0.011375 51664 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 48.602 26.516 7291900 0 0 0 0 1320900 0 1881400 0 1627200 0 0 0 0 2462400 0 51956 3105 46647 436317;436318;436319;436320 344919 344919 1 TITVVQR Unmodified 815.4865 0.48650199 4690 Q9NW64 RBM22 Pre-mRNA-splicing factor RBM22 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.301 26.501 2 0.023574 26878 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 92.692 12.315 219570000 0 0 0 12444000 15998000 18637000 20072000 13172000 11674000 22729000 20254000 21851000 12100000 19923000 30714000 51957 4690 46648 436321;436322;436323;436324;436325;436326;436327;436328;436329;436330;436331;436332 344920;344921;344922 344920 3 TITYFDSQR Unmodified 1129.5404 0.54038805 4400 Q9H4L4 SENP3 Sentrin-specific protease 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 46.352 46.615 2 0.013807 52469 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 59.245 47.476 57285000 0 0 0 0 2907200 4470000 0 4749600 0 4837900 5903800 10081000 8689000 7247200 8399400 51958 4400 46649 436333;436334;436335;436336;436337;436338;436339;436340;436341 344923;344924;344925;344926;344927;344928;344929;344930;344931 344923 9 TITYQAVPSEVPNEEPK Unmodified 1900.9418 0.941823 4242 Q9BY44 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.4 3.2 3 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 64.789 63.523 2;3 4.3544E-10 73135 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 112.43 99.422 299430000 12456000 131580000 0 5750300 4918100 18693000 11057000 6104200 4155900 11537000 19074000 17035000 13753000 15189000 28126000 51959 4242 46650 436342;436343;436344;436345;436346;436347;436348;436349;436350;436351;436352;436353;436354;436355;436356 344932;344933;344934;344935;344936;344937;344938;344939;344940;344941;344942 344941 6 TIVEAASDEERLK Unmodified 1459.7518 0.75183739 4708 Q9NWY4 C4orf27 UPF0609 protein C4orf27 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS 6.64 3.88 5 1 8 2 2 2 1 1 1 1 1 1 1 1 44.012 41.744 2;3 8.0071E-08 52563 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 125.54 111.51 184510000 25532000 90269000 42246000 1861800 0 2166000 0 1960700 1477000 0 0 3726000 2280900 3845000 9148100 51960 4708 46651 436357;436358;436359;436360;436361;436362;436363;436364;436365;436366;436367;436368;436369;436370 344943;344944;344945;344946;344947;344948;344949;344950 344950 6 TIVEEVQDGK Unmodified 1116.5663 0.56626845 84 CON__Q04695;Q04695 KRT17 Keratin, type I cytoskeletal 17 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 36.632 36.708 2 0.00099736 40534 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 110.87 78.059 + 252190000 0 0 0 48291000 24641000 0 19767000 31078000 13346000 23681000 19524000 0 49649000 22208000 0 51961 84 46652 436371;436372;436373;436374;436375;436376;436377;436378;436379 344951;344952;344953;344954;344955;344956;344957;344958;344959 344955 6 TIVEFECRGLEPVDFQPQAGFAAEGVESGTAFSDINLQEK Unmodified 4385.0798 0.079796409 4703 Q9NWV4 C1orf123 UPF0587 protein C1orf123 yes yes 0 0 1 By MS/MS 3 0 1 1 96.169 92.665 4 0.0053216 95802 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 22.179 20.792 2295400 2295400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51962 4703 46653 436380 344960 344960 1 TIVEMENSGLVHMLK Oxidation (M) 1715.8586 0.85862742 2330 Q13618 CUL3 Cullin-3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 3 1 2 76.377 71.215 3 4.1449E-11 92855 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 111.88 96.352 103980000 78169000 17410000 8397300 0 0 0 0 0 0 0 0 0 0 0 0 51963 2330 46654 436381;436382;436383;436384;436385;436386 344961;344962;344963;344964 344963 3798;3799 4 TIVEMENSGLVHMLK Unmodified 1699.8637 0.8637128 2330 Q13618 CUL3 Cullin-3 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 86.533 80.08 3 0.00016395 102241 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.192 64.359 77700000 47839000 29861000 0 0 0 0 0 0 0 0 0 0 0 0 0 51964 2330 46654 436387;436388 344965;344966 344966 2 TIVEMENSGLVHMLK 2 Oxidation (M) 1731.8535 0.85354204 2330 Q13618 CUL3 Cullin-3 yes yes 0 2 0 By MS/MS By MS/MS 2 0 2 1 1 62.392 56.361 3 0.00045791 70412 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 75.764 68.873 31010000 18992000 0 12018000 0 0 0 0 0 0 0 0 0 0 0 0 51965 2330 46654 436389;436390 344967;344968;344969 344969 3798;3799 2 TIVFSENHK Unmodified 1073.5506 0.55055881 3453 Q8NG31 CASC5 Protein CASC5 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 33.459 28.668 2 0.022738 36180 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 72.789 45.652 12103000 8294400 0 3808600 0 0 0 0 0 0 0 0 0 0 0 0 51966 3453 46655 436391;436392 344970 344970 1 TIVFVETK Unmodified 935.53278 0.53278348 1062 P17844 DDX5 Probable ATP-dependent RNA helicase DDX5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55.311 54.224 2 0.023187 61563 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 107.66 67.396 1243500000 26914000 23777000 22035000 57556000 60761000 82258000 80949000 71501000 73489000 113690000 116370000 146620000 125470000 84985000 157120000 51967 1062 46656 436393;436394;436395;436396;436397;436398;436399;436400;436401;436402;436403;436404;436405;436406;436407 344971;344972;344973;344974;344975;344976;344977 344971 2 TIVHESERLEALK Unmodified 1523.8308 0.83075641 4137 Q9BT78 COPS4 COP9 signalosome complex subunit 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.64 3.88 5 1 8 4 2 1 1 1 1 1 1 1 1 48.411 45.414 2;3;4 0.00050686 49046 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 63.181 41.268 551030000 297170000 73704000 0 0 0 22897000 0 6249700 17298000 14982000 0 35168000 18139000 0 65421000 51968 4137 46657 436408;436409;436410;436411;436412;436413;436414;436415;436416;436417;436418;436419;436420;436421 344978;344979;344980;344981;344982;344983;344984;344985;344986;344987;344988;344989;344990;344991 344979 14 TIVITSHPGQIVK Unmodified 1391.8136 0.81364979 1303 P31689 DNAJA1 DnaJ homolog subfamily A member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 51.234 51.386 2;3 1.1689E-12 57856 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 127.42 108.68 1335100000 0 0 0 77154000 74993000 96640000 103920000 92587000 57667000 109840000 114890000 159350000 83391000 120110000 244560000 51969 1303 46658 436422;436423;436424;436425;436426;436427;436428;436429;436430;436431;436432;436433;436434;436435;436436;436437;436438;436439;436440;436441;436442;436443;436444;436445 344992;344993;344994;344995;344996;344997;344998;344999;345000;345001;345002;345003;345004;345005;345006;345007;345008;345009;345010;345011;345012;345013;345014;345015;345016;345017;345018;345019;345020 344997 28 TIVLQEGNSQK Unmodified 1215.6459 0.64591575 4260 Q9BZD4 NUF2 Kinetochore protein Nuf2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 2 1 1 31.793 30.764 2 0.00020982 38992 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.26 75.664 155850000 5858600 83255000 4108600 0 6731000 6449100 6435200 0 3853200 8044000 6872200 10064000 0 4319400 9855800 51970 4260 46659 436446;436447;436448;436449;436450;436451;436452;436453;436454;436455;436456;436457;436458;436459;436460 345021;345022;345023;345024;345025;345026;345027;345028;345029;345030;345031;345032;345033;345034;345035;345036 345024 16 TIVMGASFR Unmodified 980.51134 0.51133653 1392 P37837 TALDO1 Transaldolase yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 56.892 57.483 2 0.012256 64615 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.582 42.851 45337000 0 0 0 0 0 0 0 0 0 0 0 11049000 0 0 34288000 51971 1392 46660 436461;436462 345037 345037 1 TIVMGASFRNTGEIK Oxidation (M) 1638.8399 0.83994089 1392 P37837 TALDO1 Transaldolase yes yes 0 1 1 By MS/MS 2.5 0.5 1 1 2 56.495 49.697 2;3 0.011591 50154 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 41.644 33.733 11657000 11657000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51972 1392 46661 436463;436464 345038;345039 345038 2160 2 TIVMGASFRNTGEIK Unmodified 1622.845 0.84502627 1392 P37837 TALDO1 Transaldolase yes yes 0 0 1 By MS/MS 2 0 1 1 70.99 62.724 3 0.023279 83452 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 36.022 24.916 13474000 13474000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51973 1392 46661 436465 345040 345040 1 TIVQLENEIYQIK Unmodified 1589.8665 0.86647322 560 O75934 BCAS2 Pre-mRNA-splicing factor SPF27 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 85.001 85.146 2 5.5179E-05 98677 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 103.22 67.806 30243000 0 0 0 0 0 0 0 0 0 6429100 6775900 3937400 0 2057900 11042000 51974 560 46662 436466;436467;436468;436469;436470 345041;345042;345043;345044;345045 345041 5 TIVQSGGIK Unmodified 901.52328 0.52328142 1685 P52306 RAP1GDS1 Rap1 GTPase-GDP dissociation stimulator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 29.856 25.45 2 0.037197 35306 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.464 25.489 329970000 33957000 290910000 5098400 0 0 0 0 0 0 0 0 0 0 0 0 51975 1685 46663 436471;436472;436473 345046;345047 345046 2 TIVQSSFPVK Unmodified 1104.6179 0.61791009 3034 Q75QN2 INTS8 Integrator complex subunit 8 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 56.753 57.093 2 0.0056189 64171 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 68.224 34.427 30660000 0 0 0 0 0 0 3913500 3210500 0 0 5994600 5789700 0 4030200 7721900 51976 3034 46664 436474;436475;436476;436477;436478;436479 345048;345049;345050;345051 345051 4 TIVTDVFQGSMR Unmodified 1352.6758 0.67583567 2702 Q53GS9 USP39 U4/U6.U5 tri-snRNP-associated protein 2 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 78.668 78.845 2 0.0073147 91051 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 50.284 31.013 9779800 0 0 0 0 0 0 2764700 7015100 0 0 0 0 0 0 0 51977 2702 46665 436480;436481 345052 345052 1 TIVTNEYMK Unmodified 1097.5427 0.54269624 1554 P48739 PITPNB Phosphatidylinositol transfer protein beta isoform yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 43.238 43.509 2 0.0097334 47741 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.88 37.706 56175000 0 0 0 4013900 0 7682400 0 0 0 3608900 7750600 9225600 0 0 23894000 51978 1554 46666 436482;436483;436484;436485;436486;436487 345053;345054;345055 345055 3 TIVYWGIGR Unmodified 1063.5815 0.581465 1694 P52701 MSH6 DNA mismatch repair protein Msh6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 76.411 76.435 2 0.018767 88801 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 54.549 28.813 25562000 0 0 0 2260600 0 5170900 3808800 5014700 4775300 0 0 0 0 4531900 0 51979 1694 46667 436488;436489;436490;436491;436492;436493 345056;345057;345058;345059;345060;345061 345061 6 TIYEQELK Unmodified 1022.5284 0.52842638 99 Q6KB66;CON__Q6KB66-1 KRT80 Keratin, type II cytoskeletal 80 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 38.368 38.142 2 0.0046147 43128 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 132.57 92.299 + 328310000 0 43452000 0 55149000 15032000 12077000 16663000 56797000 10840000 22984000 17054000 33755000 22673000 11786000 10048000 51980 99 46668 436494;436495;436496;436497;436498;436499;436500;436501;436502;436503;436504;436505;436506 345062;345063;345064;345065;345066;345067;345068;345069;345070;345071;345072 345071 11 TIYFFGDK Unmodified 989.48583 0.48583328 272 O15305 PMM2 Phosphomannomutase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 72.27 72.407 2 0.041222 83236 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 50.04 24.214 70004000 0 0 0 0 3880200 0 4434700 0 0 4696400 10635000 13305000 4139500 7342600 21570000 51981 272 46669 436507;436508;436509;436510;436511;436512;436513;436514 345073 345073 1 TIYLEDIYVMPEYR Oxidation (M) 1819.8702 0.87023797 3831 Q96F10 SAT2 Diamine acetyltransferase 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 84.871 84.847 2 8.8024E-29 98383 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 143.79 139.93 114170000 0 0 0 3701300 9421600 16857000 0 0 0 29434000 24553000 30205000 0 0 0 51982 3831 46670 436515;436516;436517;436518;436519;436520 345074;345075;345076;345077;345078;345079 345075 5351 4 TIYLEDIYVMPEYR Unmodified 1803.8753 0.87532334 3831 Q96F10 SAT2 Diamine acetyltransferase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 89.789 89.936 2 0.0001804 104414 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 99.215 87.002 4349200 0 0 0 0 0 0 0 0 0 1886400 1432600 1030200 0 0 0 51983 3831 46670 436521;436522;436523 345080;345081;345082;345083 345080 4 TIYNLVDMERK Unmodified 1380.7071 0.7071358 4672 Q9NVM9 ASUN Protein asunder homolog yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS 6.8 3.92 2 3 1 1 1 1 1 69.062 66.541 3 0.0057373 74104 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.737 29.039 67982000 42835000 13760000 0 0 0 2011900 0 0 2086700 0 0 0 0 0 7288100 51984 4672 46671 436524;436525;436526;436527;436528 345084;345085;345086 345085 3 TIYNLVDMERK Oxidation (M) 1396.7021 0.70205043 4672 Q9NVM9 ASUN Protein asunder homolog yes yes 0 1 1 By MS/MS By matching 2 0 2 1 1 60.031 53.99 3 0.018192 73018 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 44.299 29.946 29362000 25457000 0 3904900 0 0 0 0 0 0 0 0 0 0 0 0 51985 4672 46671 436529;436530 345087 345087 6086 0 TIYQVDLPHTAIQEASNK Unmodified 2027.0324 0.032369346 3240 Q8IWE5 PLEKHM2 Pleckstrin homology domain-containing family M member 2 yes yes 0 0 0 By MS/MS 2 0 1 1 75.767 73.005 3 0.024229 88901 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 23.33 13.925 4999100 0 0 4999100 0 0 0 0 0 0 0 0 0 0 0 0 51986 3240 46672 436531 345088 345088 1 TIYQVDLPHTAIQEASNKK Unmodified 2155.1273 0.12733236 3240 Q8IWE5 PLEKHM2 Pleckstrin homology domain-containing family M member 2 yes yes 0 0 1 By MS/MS 2 0 1 1 75.675 67.545 4 0.01503 89138 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 44.587 35.878 11901000 11901000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51987 3240 46673 436532 345089 345089 1 TIYSSYQLAALQR Unmodified 1512.7936 0.79364262 402 O60479 DLX3 Homeobox protein DLX-3 yes yes 0 0 0 By MS/MS 10 0 1 1 74.148 74.402 2 0.0046743 85820 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 85.377 59.992 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51988 402 46674 436533 345090 345090 1 TIYTPGSTVLYR Unmodified 1369.7242 0.72416608 741 P01024;CON__Q2UVX4 C3 Complement C3;Complement C3 beta chain;C3-beta-c;Complement C3 alpha chain;C3a anaphylatoxin;Acylation stimulating protein;Complement C3b alpha' chain;Complement C3c alpha' chain fragment 1;Complement C3dg fragment;Complement C3g fragment;Complement C3d fragment;Complement C3f fragment;Complement C3c alpha' chain fragment 2 yes no 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 68.521 68.28 2 0.0059177 78211 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 52.725 37.575 8263900 0 0 0 1821300 0 0 0 6442600 0 0 0 0 0 0 0 51989 741 46675 436534;436535 345091 345091 1 TKDEPQRETLK Unmodified 1343.7045 0.70449327 1130 P21926 CD9 CD9 antigen yes yes 0 0 2 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 7.6192 7.8031 3 0.016262 5582 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 59.542 37.783 32859000 0 0 0 0 0 0 0 9792100 0 0 0 13742000 9324400 0 0 51990 1130 46676 436536;436537;436538 345092;345093;345094 345092 2 TKDEYLINSQTTEHIVK Unmodified 2018.032 0.032034995 4626 Q9NSE4 IARS2 Isoleucine--tRNA ligase, mitochondrial yes yes 0 0 1 By matching By MS/MS 2 0 2 1 1 61.024 54.989 3 5.8217E-05 68119 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 73.464 62.648 14403000 3788200 0 10615000 0 0 0 0 0 0 0 0 0 0 0 0 51991 4626 46677 436539;436540 345095;345096 345095 2 TKFETEQALR Unmodified 1221.6354 0.63535107 84;68 CON__Q04695;Q04695;CON__P08727;P08727 KRT17;KRT19 Keratin, type I cytoskeletal 17;Keratin, type I cytoskeletal 19 no no 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching 10 0 5 1 1 1 1 1 30.255 30.323 3 0.0050044 33028 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 53.237 20.149 + 79513000 0 0 0 26175000 0 0 17574000 17877000 4813500 0 0 0 0 13074000 0 51992 84;68 46678 436541;436542;436543;436544;436545 345097;345098;345099 345097 3 TKHEEILQNLQK Unmodified 1479.8045 0.80454166 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 36.336 36.641 3 0.032025 38741 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.207 23.419 37123000 0 0 0 0 0 2680600 0 0 3531200 5217900 5195900 0 6652100 4955000 8889800 51993 1286 46679 436546;436547;436548;436549;436550;436551;436552 345100 345100 1 TKLTEEEK Unmodified 976.50769 0.50769094 60 CON__P02663 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.6431 6.7673 2 0.0051212 4647 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 153.78 100.62 + 204290000 0 0 0 11801000 17040000 6666200 15934000 14357000 7653900 11139000 12848000 17551000 76083000 5376800 7840800 51994 60 46680 436553;436554;436555;436556;436557;436558;436559;436560;436561;436562;436563;436564 345101;345102 345101 1 TKPDPEVEEQEK Unmodified 1427.678 0.67800374 3846 Q96G25 MED8 Mediator of RNA polymerase II transcription subunit 8 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 14.491 14.62 3 0.00376 13264 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 37.87 13.936 94978000 0 0 0 7904800 8423800 8098400 7991900 10267000 7712900 8840000 12832000 10917000 0 11990000 0 51995 3846 46681 436565;436566;436567;436568;436569;436570;436571;436572;436573;436574 345103;345104;345105;345106 345105 4 TKPIWTRNPDDITNEEYGEFYK Unmodified 2715.2817 0.28166075 850 P07900 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 0 0 2 By MS/MS By MS/MS 2.5 0.5 2 2 3 1 79.599 73.729 3;4 2.3226E-15 95082 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.48 88.368 185030000 180290000 4740300 0 0 0 0 0 0 0 0 0 0 0 0 0 51996 850 46682 436575;436576;436577;436578 345107;345108;345109 345109 3 TKPIWTRNPDDITQEEYGEFYK Unmodified 2729.2973 0.29731082 862 P08238 HSP90AB1 Heat shock protein HSP 90-beta yes yes 0 0 2 By MS/MS 2 0 2 2 81.307 73.176 3;4 7.5961E-26 95856 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 108.37 93.415 284380000 284380000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51997 862 46683 436579;436580 345110;345111 345110 1 TKPLATTQPAK Unmodified 1154.6659 0.66592292 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 12.677 11.951 3 0.0064799 11129 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 54.772 40.994 691200000 332310000 114430000 29387000 15023000 15008000 8645000 15531000 10895000 7708800 16674000 16688000 30388000 21678000 20863000 35975000 51998 1226 46684 436581;436582;436583;436584;436585;436586;436587;436588;436589;436590;436591;436592;436593;436594;436595;436596 345112;345113;345114;345115;345116;345117;345118;345119;345120;345121 345112 3 TKPPLAPGTILYEAELSQFSEDIK Unmodified 2646.3792 0.37924953 4275 Q9BZQ8 FAM129A Protein Niban yes yes 0 0 1 By MS/MS 2 0 1 1 97.885 89.755 3 8.4891E-47 115811 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.397 86.674 37787000 37787000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51999 4275 46685 436597 345122 345122 1 TKPPLDHNASATDYK Unmodified 1656.8107 0.81074925 659 O95425 SVIL Supervillin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 7 1 1 1 1 1 1 1 22.493 22.684 3 0.016211 24298 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 23.481 16.279 21719000 0 0 0 0 1987900 2478600 2392100 0 0 3704300 2835500 5274100 3046700 0 0 52000 659 46686 436598;436599;436600;436601;436602;436603;436604 345123 345123 1 TKPQDMISAGGESVAGITAISGK Unmodified 2217.1311 0.13109711 1113 P20810 CAST Calpastatin yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS 6.8 3.92 2 3 1 1 1 1 1 78.568 77.243 3 4.6045E-12 95589 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 61.801 54.525 100710000 0 62333000 4476800 0 0 0 0 3596500 0 0 8560600 0 0 0 21744000 52001 1113 46687 436605;436606;436607;436608;436609 345124;345125;345126;345127;345128 345124 5 TKPQDMISAGGESVAGITAISGKPGDK Oxidation (M) 2630.3221 0.32214536 1113 P20810 CAST Calpastatin yes yes 0 1 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 63.191 63.355 3 4.6493E-71 72349 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 113.15 105.87 141690000 0 0 0 0 5425400 7588500 12109000 0 7001600 13223000 18006000 29513000 8363100 19007000 21457000 52002 1113 46688 436610;436611;436612;436613;436614;436615;436616;436617;436618;436619;436620 345129;345130;345131;345132;345133;345134;345135;345136;345137;345138;345139;345140;345141;345142;345143 345142 1602 15 TKPQDMISAGGESVAGITAISGKPGDK Unmodified 2614.3272 0.32723074 1113 P20810 CAST Calpastatin yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 2 2 2 2 74.641 74.617 3;4 4.6757E-49 85575 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.86 94.096 322580000 0 0 18632000 0 0 4132400 0 9282400 9211900 10777000 39268000 46144000 0 38047000 147090000 52003 1113 46688 436621;436622;436623;436624;436625;436626;436627;436628;436629;436630;436631;436632;436633 345144;345145;345146;345147;345148;345149;345150;345151;345152;345153;345154;345155 345146 12 TKPQMQEER Unmodified 1145.5499 0.54990688 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 6.8178 6.9274 3 0.015755 4958 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 43.77 28.626 57131000 0 0 0 3929400 3353000 0 4501800 5874000 0 9244500 27626000 0 0 0 2601600 52004 528 46689 436634;436635;436636;436637;436638;436639;436640 345156;345157;345158 345157 3 TKPSDEEMLFIYGHYK Unmodified 1956.9291 0.92914983 835 P07108 DBI Acyl-CoA-binding protein yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS 5.12 3.82 1 2 2 3 3 2 1 2 81.841 80.094 3;4 3.5429E-31 95479 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 127.75 118.34 347590000 205380000 68498000 0 0 0 0 0 0 0 4635800 0 0 0 0 69078000 52005 835 46690 436641;436642;436643;436644;436645;436646;436647;436648 345159;345160;345161;345162;345163 345162 4 TKPSDEEMLFIYGHYK Oxidation (M) 1972.9241 0.92406445 835 P07108 DBI Acyl-CoA-binding protein yes yes 0 1 1 By MS/MS By MS/MS By matching By MS/MS By matching 6 4 3 3 2 1 1 1 1 68.829 65.688 3;4 0.00014553 81983 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 72.898 69.237 193470000 151650000 0 17328000 0 0 0 0 0 0 0 8541400 10609000 0 5344400 0 52006 835 46690 436649;436650;436651;436652;436653;436654 345164;345165;345166;345167 345166 1018 4 TKPYIQVDIGGGQTK Unmodified 1603.857 0.85697116 932 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.11 3.8 6 1 12 3 2 2 1 1 1 1 1 1 1 1 1 1 1 1 57.87 55.788 2;3 0.00026515 69770 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 66.436 55.952 809040000 527780000 104420000 19905000 4724300 5944500 6137100 9739300 10809000 7615200 16632000 20884000 21230000 10061000 12755000 30410000 52007 932 46691 436655;436656;436657;436658;436659;436660;436661;436662;436663;436664;436665;436666;436667;436668;436669;436670;436671;436672;436673 345168;345169;345170;345171;345172;345173;345174;345175;345176;345177 345175 7 TKTEISEMNR Oxidation (M) 1223.5816 0.58160094 67 CON__P05787;P05787;CON__Q9H552 KRT8 Keratin, type II cytoskeletal 8 yes no 0 1 1 By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 7.6017 7.7397 3 0.041149 6117 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 42.243 32.289 + 65109000 0 0 0 3557100 4418100 0 5965300 3179900 0 3988400 16786000 14894000 5172000 2671200 4477200 52008 67 46692 436674;436675;436676;436677;436678;436679;436680;436681;436682;436683 345178 345178 80 0 TKTEISEMNR Unmodified 1207.5867 0.58668632 67 CON__P05787;P05787;CON__Q9H552 KRT8 Keratin, type II cytoskeletal 8 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 18 18.065 3 0.0078722 18400 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 43.297 32.132 + 45767000 0 0 0 5095200 8214900 0 5295700 0 0 5839400 0 21322000 0 0 0 52009 67 46692 436684;436685;436686;436687;436688 345179;345180;345181 345180 2 TKYDEETTAK Unmodified 1184.5561 0.55609769 1406;2357 P39880;Q13948 CUX1 Homeobox protein cut-like 1;Protein CASP no no 0 0 1 By MS/MS 2.5 0.5 1 1 2 9.1006 5.792 2 0.037993 8450 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.499 58.576 20151000 0 20151000 0 0 0 0 0 0 0 0 0 0 0 0 0 52010 1406;2357 46693 436689;436690 345182 345182 1 TKYEEEINK Unmodified 1152.5663 0.56626845 77 CON__P19013;P19013 KRT4 Keratin, type II cytoskeletal 4 no no 0 0 1 By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 9 1 2 2 1 2 1 16.24 16.4 2;3 4.6675E-15 16221 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 166.34 142.12 + 252120000 0 0 0 1964400 0 0 53123000 161800000 0 0 0 4678900 28633000 1916000 0 52011 77 46694 436691;436692;436693;436694;436695;436696;436697;436698;436699 345183;345184;345185;345186 345185 0 TKYEEEINKR Unmodified 1308.6674 0.66737948 77 CON__P19013;P19013 KRT4 Keratin, type II cytoskeletal 4 no no 0 0 2 By matching By MS/MS By MS/MS 10 0 3 1 1 1 14.731 14.856 3 0.020006 14435 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 80.763 48.755 + 188390000 0 0 0 0 0 0 67011000 55759000 0 0 0 0 65622000 0 0 52012 77 46695 436700;436701;436702 345187;345188 345188 1 TKYEHELALR Unmodified 1258.667 0.66698555 70 CON__P08779;P08779 KRT16 Keratin, type I cytoskeletal 16 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 31.645 31.724 3 0.0010091 34822 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 90.685 83.024 + 537400000 0 0 0 30313000 0 4168900 30792000 46316000 0 0 0 0 404600000 21218000 0 52013 70 46696 436703;436704;436705;436706;436707;436708 345189;345190;345191;345192;345193;345194;345195 345192 7 TKYETELNLR Unmodified 1265.6616 0.66156582 56 CON__P02533;P02533 KRT14 Keratin, type I cytoskeletal 14 no no 0 0 1 By MS/MS 10 0 1 1 42.632 42.977 2 0.014192 48388 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 123.86 102.99 + 212110000 0 0 0 0 0 0 0 0 0 0 0 0 212110000 0 0 52014 56 46697 436709 345196 345196 1 TLAAEMQELR Oxidation (M) 1176.5809 0.58087266 3308 Q8N163 CCAR2 Cell cycle and apoptosis regulator protein 2 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 1 2 1 2 1 2 1 1 2 1 2 35.855 36.065 2 0.001443 39657 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 85.731 68.345 117300000 0 0 0 7042900 4596600 15770000 5963500 9036000 4886800 14138000 6975600 12481000 14997000 6171600 15238000 52015 3308 46698 436710;436711;436712;436713;436714;436715;436716;436717;436718;436719;436720;436721;436722;436723;436724;436725;436726 345197;345198;345199;345200;345201;345202;345203;345204;345205;345206;345207;345208 345199 4902 11 TLAAEMQELR Unmodified 1160.586 0.58595803 3308 Q8N163 CCAR2 Cell cycle and apoptosis regulator protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.399 63.492 2 0.00027802 71756 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 140.11 113.73 263970000 0 0 0 12179000 13068000 20422000 17503000 17773000 11931000 20644000 23769000 23601000 21971000 28802000 52311000 52016 3308 46698 436727;436728;436729;436730;436731;436732;436733;436734;436735;436736;436737;436738 345209;345210;345211;345212;345213;345214;345215;345216;345217;345218;345219 345212 11 TLAAFPAEK Unmodified 946.51238 0.51238239 4107 Q9BRF8 CPPED1 Serine/threonine-protein phosphatase CPPED1 yes yes 0 0 0 By MS/MS 10 0 1 1 47.209 47.94 2 0.045538 52790 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.185 8.9973 48420000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48420000 52017 4107 46699 436739 345220 345220 1 TLADIIMEK Oxidation (M) 1048.5474 0.54744726 2354 Q13895 BYSL Bystin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 64.995 65.078 2 0.010018 74274 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 57.59 46.521 55795000 0 0 0 3322800 3609000 4215500 0 3105000 5440100 5286400 5438600 7874500 6175700 4525100 6802000 52018 2354 46700 436740;436741;436742;436743;436744;436745;436746;436747;436748;436749;436750 345221;345222;345223;345224;345225;345226;345227;345228;345229;345230 345222 3841 10 TLADIIMEK Unmodified 1032.5525 0.55253264 2354 Q13895 BYSL Bystin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.171 76.229 2 0.0089939 87899 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 68.016 46.488 79023000 0 0 0 2743400 4115700 5783500 3255300 5005500 4068300 7611800 6132800 11197000 4543300 8209200 16357000 52019 2354 46700 436751;436752;436753;436754;436755;436756;436757;436758;436759;436760;436761;436762 345231;345232;345233;345234;345235;345236;345237 345237 7 TLAEHQQLIPLVEK Unmodified 1617.909 0.90900673 5235 Q9Y5K5 UCHL5 Ubiquitin carboxyl-terminal hydrolase isozyme L5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.19 3.31 5 1 20 2 3 1 1 2 2 1 1 1 2 2 2 2 2 2 72.217 71.055 2;3 1.4806E-14 92132 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.59 94.375 2465500000 1263400000 629280000 268660000 11137000 9894100 25714000 13538000 20645000 12944000 31927000 31455000 33953000 22720000 24143000 66090000 52020 5235 46701 436763;436764;436765;436766;436767;436768;436769;436770;436771;436772;436773;436774;436775;436776;436777;436778;436779;436780;436781;436782;436783;436784;436785;436786;436787;436788 345238;345239;345240;345241;345242;345243;345244;345245;345246;345247;345248;345249;345250;345251;345252;345253;345254;345255;345256;345257;345258 345241 19 TLAEINANRADAEEEAATR Unmodified 2043.9821 0.98212469 2281 Q13409 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 47.401 47.564 3 0.0017429 53418 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 38.878 34.909 76833000 0 0 0 6251200 3724500 4014200 5551700 0 3181100 6716300 9584400 11198000 6242900 5548400 14821000 52021 2281 46702 436789;436790;436791;436792;436793;436794;436795;436796;436797;436798;436799 345259;345260;345261;345262;345263 345261 5 TLAEINANRADAEEEAATRIPA Unmodified 2325.1561 0.15606631 2281 Q13409 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 68.613 68.759 3 1.043E-25 78187 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 97.488 86.043 227720000 0 0 0 0 14224000 15882000 0 19728000 15083000 24917000 24192000 33331000 16902000 20931000 42530000 52022 2281 46703 436800;436801;436802;436803;436804;436805;436806;436807;436808;436809;436810 345264;345265;345266;345267;345268;345269;345270;345271;345272;345273;345274;345275;345276 345267 13 TLAEQNLEDTR Unmodified 1288.6259 0.62590859 3665 Q92805 GOLGA1 Golgin subfamily A member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.244 36.357 2 0.0026758 39697 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 66.595 31.273 38857000 0 0 0 3256300 2661900 2971600 3115400 3466300 2195300 3822500 4721400 6487200 6159400 0 0 52023 3665 46704 436811;436812;436813;436814;436815;436816;436817;436818;436819;436820;436821;436822 345277;345278;345279;345280;345281;345282;345283;345284;345285;345286;345287 345285 10 TLAEQNLEDTRQQLLAAR Unmodified 2069.0865 0.086530182 3665 Q92805 GOLGA1 Golgin subfamily A member 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 70.155 70.436 3 0.016714 80887 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 22.221 12.563 23997000 0 0 0 0 0 0 0 2557900 0 4525100 4584700 4484000 0 0 7845500 52024 3665 46705 436823;436824;436825;436826;436827 345288;345289;345290 345290 3 TLAESALQLLYTAK Unmodified 1520.845 0.84500949 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.57 3.96 3 4 1 2 1 1 1 1 95.386 92.96 2 1.3677E-34 115955 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 159.01 140.85 116070000 44979000 58362000 0 0 0 0 0 723310 0 3441500 1949900 0 0 0 6612700 52025 5187 46706 436828;436829;436830;436831;436832;436833;436834 345291;345292;345293;345294;345295;345296;345297 345296 6 TLAESDEGK Unmodified 948.44001 0.4400053 2170 Q09161 NCBP1 Nuclear cap-binding protein subunit 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 8.8171 5.374 2 0.036996 9202 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.582 23.764 27200000 8024500 19176000 0 0 0 0 0 0 0 0 0 0 0 0 0 52026 2170 46707 436835;436836 345298 345298 1 TLAESMGIEVK Oxidation (M) 1192.6009 0.6009394 1060 P17735 TAT Tyrosine aminotransferase yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 44.38 44.205 2 0.011743 49308 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 43.769 7.0089 87365000 0 0 0 0 44673000 0 0 0 0 42692000 0 0 0 0 0 52027 1060 46708 436837;436838 345299;345300 345299 1485 2 TLAFTSVDLTNK Unmodified 1308.6925 0.6925316 4554 Q9NPJ3 ACOT13 Acyl-coenzyme A thioesterase 13;Acyl-coenzyme A thioesterase 13, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 76.149 74.921 2 3.3766E-05 94836 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 118.4 94.975 723140000 47377000 584700000 15881000 2719000 2491500 6354600 3874100 4939200 0 6139200 6254900 12209000 4774100 5812500 19614000 52028 4554 46709 436839;436840;436841;436842;436843;436844;436845;436846;436847;436848;436849;436850;436851;436852;436853 345301;345302;345303;345304;345305;345306;345307;345308;345309;345310;345311;345312;345313 345307 13 TLAGDVHIVR Unmodified 1079.6087 0.60874239 4850 Q9UBQ0 VPS29 Vacuolar protein sorting-associated protein 29 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 44.766 45.315 2 0.0033461 49560 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.827 58.791 39298000 0 0 0 0 0 0 0 0 0 0 5104400 10052000 0 5508200 18633000 52029 4850 46710 436854;436855;436856;436857 345314;345315;345316 345314 3 TLAGDVHIVRGDFDENLNYPEQK Unmodified 2629.2772 0.27724408 4850 Q9UBQ0 VPS29 Vacuolar protein sorting-associated protein 29 yes yes 0 0 1 By MS/MS By MS/MS 2.57 0.495 3 4 4 3 79.624 74.579 3;4 1.28E-56 94292 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.98 121.7 375240000 282660000 92585000 0 0 0 0 0 0 0 0 0 0 0 0 0 52030 4850 46711 436858;436859;436860;436861;436862;436863;436864 345317;345318;345319;345320;345321 345317 4 TLAGHEGK Unmodified 811.41882 0.41881635 303 O43172 PRPF4 U4/U6 small nuclear ribonucleoprotein Prp4 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 0.72208 -1.9979 2 0.01951 1510 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.794 65.092 39846000 39394000 0 451740 0 0 0 0 0 0 0 0 0 0 0 0 52031 303 46712 436865;436866 345322 345322 1 TLAGLPLLVAYK Unmodified 1257.7697 0.76965971 437 O60841 EIF5B Eukaryotic translation initiation factor 5B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 92.119 91.151 2 3.2287E-05 114906 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 102.62 96.004 97943000 24827000 11864000 661320 885810 1448000 8423400 2298700 4084400 5692900 8108100 4771700 5133000 2748600 3007700 13988000 52032 437 46713 436867;436868;436869;436870;436871;436872;436873;436874;436875;436876;436877;436878;436879;436880;436881 345323;345324;345325;345326;345327;345328;345329;345330;345331;345332;345333;345334;345335;345336 345331 14 TLAGNVIADLSDSSADSENLSPDIK Unmodified 2531.2239 0.2238711 454 O75113 N4BP1 NEDD4-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 91.789 88.254 3 0.033995 107090 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 25.604 11.589 18631000 0 17521000 1110400 0 0 0 0 0 0 0 0 0 0 0 0 52033 454 46714 436882;436883;436884 345337;345338 345338 1 TLALIKPDAISK Unmodified 1268.7704 0.77038799 5230 Q9Y5B8 NME7 Nucleoside diphosphate kinase 7 yes yes 0 0 1 By MS/MS 2 0 1 1 74.233 66.102 3 0.0083077 87388 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.908 51.412 33468000 33468000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52034 5230 46715 436885 345339 345339 1 TLALQQQLQAVR Unmodified 1367.7885 0.78849767 4800 Q9P0W2 HMG20B SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.962 71.035 2 2.641E-05 81525 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 94.85 80.732 183760000 0 0 0 7889500 10956000 13835000 13238000 12921000 9388100 17346000 16204000 22041000 20781000 13266000 25899000 52035 4800 46716 436886;436887;436888;436889;436890;436891;436892;436893;436894;436895;436896;436897 345340;345341;345342;345343;345344;345345;345346;345347;345348;345349;345350;345351 345346 12 TLAMDTILANAK Oxidation (M) 1276.6697 0.66968766 3506 Q8TDQ7 GNPDA2 Glucosamine-6-phosphate isomerase 2 yes yes 0 1 0 By MS/MS By MS/MS 2 0 3 2 1 64.047 59.207 2 0.0017191 73205 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 85.377 66.106 38811000 0 31354000 7456700 0 0 0 0 0 0 0 0 0 0 0 0 52036 3506 46717 436898;436899;436900 345352;345353;345354 345354 5016 3 TLAMDTILANAK Unmodified 1260.6748 0.67477304 3506 Q8TDQ7 GNPDA2 Glucosamine-6-phosphate isomerase 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 83.874 77.449 2 3.1164E-14 97887 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 137.28 113.32 273660000 42231000 231420000 0 0 0 0 0 0 0 0 0 0 0 0 0 52037 3506 46717 436901;436902 345355;345356 345355 2 TLAMDTILANAR Unmodified 1288.6809 0.68092105 1514 P46926 GNPDA1 Glucosamine-6-phosphate isomerase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.8 3.92 2 3 1 1 1 1 1 82.434 78.896 2 5.9019E-05 100689 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 99.653 79.324 33417000 20252000 0 3652500 0 0 9512300 0 0 0 0 0 0 0 0 0 52038 1514 46718 436903;436904;436905;436906;436907 345357;345358;345359;345360;345361 345359 5 TLAMDTILANAR Oxidation (M) 1304.6758 0.67583567 1514 P46926 GNPDA1 Glucosamine-6-phosphate isomerase 1 yes yes 0 1 0 By MS/MS 10 0 1 1 60.069 60.568 2 0.0087309 68913 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 62.303 43.032 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52039 1514 46718 436908 345362 345362 2395 1 TLAPTWEELSK Unmodified 1273.6554 0.65541781 3402 Q8NBS9 TXNDC5 Thioredoxin domain-containing protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.83 3.67 3 1 2 1 2 1 1 1 75.971 72.874 2 4.3169E-05 87915 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 134.25 115.15 2446300000 54379000 2210200000 56927000 0 0 0 0 0 0 0 0 0 0 32406000 92413000 52040 3402 46719 436909;436910;436911;436912;436913;436914 345363;345364;345365;345366;345367;345368;345369;345370 345367 7 TLAQAMLNNAQPDQYEAPDK Oxidation (M) 2233.0321 0.03211135 3692 Q92973 TNPO1 Transportin-1 yes yes 0 1 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.6 1.74 1 19 1 1 1 1 2 2 1 2 2 2 2 1 2 55.713 55.611 2;3 3.3086E-92 68597 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 166.04 135.04 227840000 0 24798000 0 6442400 5060600 11907000 18821000 10171000 4591200 31284000 18976000 43786000 21204000 8562000 22232000 52041 3692 46720 436915;436916;436917;436918;436919;436920;436921;436922;436923;436924;436925;436926;436927;436928;436929;436930;436931;436932;436933;436934 345371;345372;345373;345374;345375;345376;345377 345373 5258 7 TLAQAMLNNAQPDQYEAPDK Unmodified 2217.0372 0.037196727 3692 Q92973 TNPO1 Transportin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.1 3.37 6 1 22 2 3 2 1 2 2 2 2 1 2 2 2 2 2 2 73.92 73.028 2;3 0 90511 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 351.2 329.43 779660000 10068000 350030000 5402000 7707700 21839000 47510000 13597000 38692000 7739900 50632000 41918000 41951000 36496000 39450000 66635000 52042 3692 46720 436935;436936;436937;436938;436939;436940;436941;436942;436943;436944;436945;436946;436947;436948;436949;436950;436951;436952;436953;436954;436955;436956;436957;436958;436959;436960;436961;436962;436963 345378;345379;345380;345381;345382;345383;345384;345385;345386;345387;345388;345389;345390;345391 345379 14 TLAQAMMYTQHPEQYEAPDK Unmodified 2351.0562 0.05621761 215 O14787 TNPO2 Transportin-2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 75.365 68.722 3 1.1339E-29 89409 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 115.57 103.44 60384000 36257000 24127000 0 0 0 0 0 0 0 0 0 0 0 0 0 52043 215 46721 436964;436965 345392;345393;345394;345395 345395 4 TLAQLNPESSLFIIASK Unmodified 1831.0091 0.0091147084 829 P06744 GPI Glucose-6-phosphate isomerase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 5.87 3.88 6 2 7 3 3 2 1 2 1 1 2 94.496 92.233 2;3 4.4857E-72 115313 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 202.13 179.21 4213300000 3252300000 747850000 27367000 0 0 0 0 0 0 3311800 25781000 10894000 0 11896000 133900000 52044 829 46722 436966;436967;436968;436969;436970;436971;436972;436973;436974;436975;436976;436977;436978;436979;436980 345396;345397;345398;345399;345400;345401;345402;345403;345404;345405;345406 345403 10 TLASPADTAGFLHSSR Unmodified 1629.8111 0.8110836 489 O75385 ULK1 Serine/threonine-protein kinase ULK1 yes yes 0 0 0 By MS/MS 2 0 1 1 22.6 19.734 3 0.041746 25181 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 50.843 28.237 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52045 489 46723 436981 345407 345407 1 TLASPEQLAQFQAQLQTGSPPATTQPQGTTQPPAQPASQGSGPTA Unmodified 4471.1892 0.18916394 2565 Q15714 TSC22D1 TSC22 domain family protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 88.292 88.328 4 0.0025525 102622 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 15.699 12.163 11822000 0 0 0 0 1830800 0 0 0 0 4930700 5060600 0 0 0 0 52046 2565 46724 436982;436983;436984 345408;345409 345408 2 TLASPEQLEK Unmodified 1114.587 0.58700389 4027 Q99576 TSC22D3 TSC22 domain family protein 3 yes yes 0 0 0 By MS/MS 2 0 2 2 43.251 40.617 2 0.0080977 51990 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.939 34.544 42703000 0 42703000 0 0 0 0 0 0 0 0 0 0 0 0 0 52047 4027 46725 436985;436986 345410;345411 345410 2 TLATDILMGVLK Oxidation (M) 1289.7265 0.72647426 295 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 94.067 94.211 2 0.00066977 109479 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 71.349 65.867 19347000 0 0 0 0 0 0 563170 0 0 4902100 2715500 0 0 1644500 9521500 52048 295 46726 436987;436988;436989;436990;436991 345412;345413;345414;345415;345416 345413 380 5 TLATQLNQQK Unmodified 1143.6248 0.62478638 2086 Q03001 DST Dystonin yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 34.538 29.043 2 2.3099E-05 38256 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 139.97 88.911 28544000 8127600 20416000 0 0 0 0 0 0 0 0 0 0 0 0 0 52049 2086 46727 436992;436993 345417;345418 345417 2 TLATWATK Unmodified 890.48617 0.48616764 2457 Q14974 KPNB1 Importin subunit beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43.254 42.201 2 0.013883 48189 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 71.379 46.381 3994000000 1968200000 997550000 295990000 28339000 0 67371000 38315000 42776000 32831000 87268000 91221000 78200000 64558000 62295000 139130000 52050 2457 46728 436994;436995;436996;436997;436998;436999;437000;437001;437002;437003;437004;437005;437006;437007 345419;345420;345421;345422;345423 345423 5 TLAVSGLGVVGR Unmodified 1127.6663 0.66625727 946 P11388 TOP2A DNA topoisomerase 2-alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 71.26 71.386 2 0.0059627 81963 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 52.579 34.139 26332000 0 0 0 0 1477600 3125300 1149000 0 0 3250800 4021300 3729800 2608400 2412900 4557300 52051 946 46729 437008;437009;437010;437011;437012;437013;437014;437015;437016 345424;345425;345426;345427;345428;345429;345430 345429 7 TLCGTPNYIAPEVLSK Unmodified 1761.8971 0.89712142 1710 P53350 PLK1 Serine/threonine-protein kinase PLK1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 9 2.65 1 7 1 1 1 1 1 1 1 1 78.151 77.509 2 0.00043003 95160 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.844 85.398 143590000 0 106010000 0 0 0 0 0 0 0 0 8354200 8261000 7434400 5114900 8416700 52052 1710 46730 437017;437018;437019;437020;437021;437022;437023;437024 345431;345432;345433;345434;345435;345436 345432 6 TLDAEVVEK Unmodified 1002.5233 0.523341 4381 Q9H3P2 NELFA Negative elongation factor A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 38.053 36.799 2 0.0077063 46509 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.802 56.679 308920000 9651800 139620000 0 17002000 17392000 0 20086000 19652000 16395000 0 0 34426000 34694000 0 0 52053 4381 46731 437025;437026;437027;437028;437029;437030;437031;437032;437033 345437;345438;345439;345440;345441;345442 345438 5 TLDAMAFNK Unmodified 1009.4903 0.49026674 845 P07686 HEXB Beta-hexosaminidase subunit beta;Beta-hexosaminidase subunit beta chain B;Beta-hexosaminidase subunit beta chain A yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 60.343 53.294 2 0.0016927 68571 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 133.9 111.01 134220000 2898800 131320000 0 0 0 0 0 0 0 0 0 0 0 0 0 52054 845 46732 437034;437035 345443 345443 1 TLDDLFPLR Unmodified 1088.5866 0.58660996 3295 Q8IZH2 XRN1 5'-3' exoribonuclease 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 85.859 85.951 2 0.0046918 99252 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 119.17 106.82 39572000 0 0 0 0 2148300 3827100 0 4751400 0 4317200 4073000 4218800 0 4738500 11498000 52055 3295 46733 437036;437037;437038;437039;437040;437041;437042;437043;437044;437045 345444;345445;345446;345447;345448;345449;345450;345451;345452;345453 345447 10 TLDEILQEK Unmodified 1087.5761 0.57610486 1118;5069 P21127;Q9UQ88 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 61.045 60.687 2 0.00056927 77905 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.16 72.452 184960000 0 92179000 0 4995200 5220800 5366800 6440500 8385400 4316900 8124400 7688700 14568000 9172500 7058700 11441000 52056 1118;5069 46734 437046;437047;437048;437049;437050;437051;437052;437053;437054;437055;437056;437057;437058 345454;345455;345456;345457;345458;345459;345460;345461;345462;345463;345464;345465 345457 12 TLDELGIHLTK Unmodified 1238.6871 0.68705229 2481 Q15029 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 69.605 69.68 2;3 0.00050973 79482 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.342 59.551 407840000 0 0 0 13630000 16777000 30399000 22659000 27277000 24476000 36530000 35992000 42203000 31892000 37493000 88514000 52057 2481 46735 437059;437060;437061;437062;437063;437064;437065;437066;437067;437068;437069;437070;437071;437072;437073;437074;437075;437076;437077;437078;437079;437080;437081;437082 345466;345467;345468;345469;345470;345471;345472;345473;345474 345468 7 TLDELSQGTTTVK Unmodified 1391.7144 0.71438925 1802 P58107 EPPK1 Epiplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 46.384 46.421 2 1.0795E-12 53014 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 153.12 139.77 89114000 0 0 0 11194000 14492000 0 8445600 12528000 7152200 0 15750000 0 12309000 7243600 0 52058 1802 46736 437083;437084;437085;437086;437087;437088;437089;437090 345475;345476;345477;345478;345479;345480;345481;345482;345483 345482 9 TLDGGLNVIQLETAVGAAIK Unmodified 1982.1048 0.10480601 2638 Q16851 UGP2 UTP--glucose-1-phosphate uridylyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 6 3 2 6 1 98.887 94.479 2;3 0 117019 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 271.08 232.81 611320000 37514000 552050000 21752000 0 0 0 0 0 0 0 0 0 0 0 0 52059 2638 46737 437091;437092;437093;437094;437095;437096;437097;437098;437099 345484;345485;345486;345487;345488;345489;345490;345491;345492;345493 345484 9 TLDGIFSEQVAMGYSHSLVIARDESETEK Unmodified 3211.5343 0.53432298 4806 Q9P258 RCC2 Protein RCC2 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 92.327 86.492 4 2.6472E-47 110536 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.01 98.593 76617000 76617000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52060 4806 46738 437100;437101 345494;345495 345495 2 TLDGIFSEQVAMGYSHSLVIARDESETEK Oxidation (M) 3227.5292 0.5292376 4806 Q9P258 RCC2 Protein RCC2 yes yes 0 1 1 By MS/MS 2 0 1 1 90.756 82.626 3 9.5891E-08 107228 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.507 38.126 11962000 11962000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52061 4806 46738 437102 345496 345496 6169 1 TLDLINK Unmodified 815.47527 0.4752686 3489 Q8TCG1 KIAA1524 Protein CIP2A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 46.404 46.656 2 0.038679 52846 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 69.383 2.3902 15905000 0 0 0 0 0 5484500 2505600 0 2008000 0 0 0 0 0 5906500 52062 3489 46739 437103;437104;437105;437106 345497;345498 345497 2 TLDLLTMK Unmodified 933.5205 0.52050423 4799 Q9P0V9 SEPT10 Septin-10 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 78.424 76.18 2 0.0035079 95245 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.29 66.128 58535000 0 48192000 0 0 0 0 0 0 0 0 10342000 0 0 0 0 52063 4799 46740 437107;437108 345499;345500;345501 345499 3 TLDLLTMK Oxidation (M) 949.51542 0.51541885 4799 Q9P0V9 SEPT10 Septin-10 yes yes 0 1 0 By matching By matching By MS/MS 10 0 3 1 1 1 60.246 60.238 2 0.017239 68531 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 58.119 40.562 7984000 0 0 0 0 1255300 0 1881000 0 0 0 4847700 0 0 0 0 52064 4799 46740 437109;437110;437111 345502 345502 6157 1 TLDLPIYVTR Unmodified 1189.6707 0.67067394 1721 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.765 82.829 2 0.00020032 95462 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 141.48 79.518 497470000 0 0 0 9191100 16889000 31184000 19797000 30852000 21401000 42478000 35298000 45700000 56727000 63027000 124930000 52065 1721 46741 437112;437113;437114;437115;437116;437117;437118;437119;437120;437121;437122;437123 345503;345504;345505;345506;345507;345508;345509;345510;345511;345512;345513 345507 11 TLDLQSGLK Unmodified 973.54441 0.5444108 4375 Q9H2Y7 ZNF106 Zinc finger protein 106 yes yes 0 0 0 By MS/MS 2 0 1 1 58.088 52.258 2 0.020613 67340 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.043 37.316 12432000 0 12432000 0 0 0 0 0 0 0 0 0 0 0 0 0 52066 4375 46742 437124 345514 345514 1 TLDLSNNQLSEIPAELADCPK Unmodified 2327.1315 0.13149104 3314 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 yes yes 0 0 0 By MS/MS By MS/MS 5 3.56 1 1 1 2 1 89.996 87.338 2;3 2.8272E-10 107932 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.282 81.385 213410000 0 210800000 0 0 0 0 0 0 0 0 0 0 0 0 2609100 52067 3314 46743 437125;437126;437127 345515;345516 345515 2 TLDNLGYR Unmodified 950.48214 0.48214489 4874 Q9UEY8 ADD3 Gamma-adducin yes yes 0 0 0 By MS/MS 10 0 1 1 40.659 41.004 2 0.01743 45787 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 65.676 38.88 8828900 0 0 0 0 0 0 0 0 0 0 0 0 8828900 0 0 52068 4874 46744 437128 345517 345517 1 TLDNLNPDVR Unmodified 1155.5884 0.58840088 2925 Q6P1X5 TAF2 Transcription initiation factor TFIID subunit 2 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 47.653 47.933 2 0.023198 53554 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.461 30.324 19769000 0 0 0 0 0 0 3958700 0 4854000 4613900 0 6342700 0 0 0 52069 2925 46745 437129;437130;437131;437132 345518 345518 1 TLDNVAIVEEEK Unmodified 1358.6929 0.69292553 4287 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 58.684 58.02 2 1.8556E-08 66247 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 135.8 116.02 727870000 0 522300000 0 9245000 7040300 21969000 12338000 11568000 12282000 18127000 20881000 21880000 21529000 22069000 26641000 52070 4287 46746 437133;437134;437135;437136;437137;437138;437139;437140;437141;437142;437143;437144;437145;437146 345519;345520;345521;345522;345523;345524;345525;345526;345527;345528;345529;345530;345531;345532;345533;345534;345535;345536 345521 18 TLDPDPAIR Unmodified 996.52401 0.52400971 1754 P55060 CSE1L Exportin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.049 43.224 2 0.0044493 47668 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 86.794 57.645 474770000 0 0 0 26239000 21183000 67574000 31415000 21323000 16366000 50713000 43957000 56990000 37988000 38961000 62064000 52071 1754 46747 437147;437148;437149;437150;437151;437152;437153;437154;437155;437156;437157;437158 345537;345538;345539;345540;345541;345542;345543;345544;345545;345546 345545 10 TLDPDPAIRRPAEK Unmodified 1577.8526 0.85255449 1754 P55060 CSE1L Exportin-2 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.04 3.41 6 1 21 3 2 2 2 1 2 2 2 2 2 1 1 2 2 2 36.548 35.383 3;4 0.00036942 45574 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 97.86 83.83 2912100000 1408400000 112120000 124980000 53314000 10540000 215590000 70991000 52685000 64886000 156700000 59385000 66174000 129640000 125200000 261580000 52072 1754 46748 437159;437160;437161;437162;437163;437164;437165;437166;437167;437168;437169;437170;437171;437172;437173;437174;437175;437176;437177;437178;437179;437180;437181;437182;437183;437184;437185;437186 345547;345548;345549;345550;345551;345552;345553;345554;345555;345556;345557;345558;345559;345560;345561;345562;345563;345564;345565;345566;345567 345561 12 TLDPLYQQSLVFDESPQGK Unmodified 2164.0688 0.068814432 3152 Q86UR5 RIMS1 Regulating synaptic membrane exocytosis protein 1 yes yes 0 0 0 By MS/MS 2 0 2 2 88.864 84.007 2;3 1.5693E-90 104383 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 184.21 171.09 78981000 0 78981000 0 0 0 0 0 0 0 0 0 0 0 0 0 52073 3152 46749 437187;437188 345568;345569 345568 1 TLDQAIMK Unmodified 918.48445 0.48445308 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 41.463 40.647 2 0.014742 44239 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 69.998 31.58 275780000 0 170590000 0 0 0 0 4967700 0 0 17539000 16782000 8767000 12701000 15130000 29303000 52074 3676 46750 437189;437190;437191;437192;437193;437194;437195;437196;437197 345570;345571;345572;345573;345574;345575;345576;345577 345575 8 TLDQAIMK Oxidation (M) 934.47937 0.4793677 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 25.638 26.148 2 0.010497 26591 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.081 23.686 50881000 0 0 0 0 0 0 0 10258000 0 0 0 20199000 0 0 20424000 52075 3676 46750 437198;437199;437200;437201;437202 345578;345579;345580;345581;345582;345583 345578 5220 6 TLDQMEPYLIELSK Unmodified 1678.8488 0.84877424 3059 Q7L8W6 DPH6 Diphthine--ammonia ligase yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 93.122 89.432 2 0.0012514 111073 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.09 92.934 43562000 0 43122000 440150 0 0 0 0 0 0 0 0 0 0 0 0 52076 3059 46751 437203;437204 345584;345585 345585 2 TLDQSPELR Unmodified 1057.5404 0.54038805 1454 P42345 MTOR Serine/threonine-protein kinase mTOR yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 1 2 1 59.58 59.689 2 0.037906 67959 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 45.081 8.3804 1891200000 0 0 0 150600000 1595500 139320000 170650000 5345200 134830000 194940000 3403800 235340000 189720000 203860000 461560000 52077 1454 46752 437205;437206;437207;437208;437209;437210;437211;437212;437213;437214;437215;437216;437217 345586;345587 345587 2 TLDRSGDLGDMEPLK Unmodified 1645.7981 0.79813565 426 O60716 CTNND1 Catenin delta-1 yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 59.924 60.184 3 0.013958 68562 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 32.659 12.965 6710000 0 0 0 0 0 0 0 0 0 3278400 3431600 0 0 0 0 52078 426 46753 437218;437219 345588 345588 1 TLDSALFYQDK Unmodified 1299.6347 0.63468237 5061 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 70.002 69.112 2 0.0043894 79303 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 61.593 37.563 113060000 0 96222000 0 0 0 2983700 0 0 0 3605000 0 0 2107500 0 8146700 52079 5061 46754 437220;437221;437222;437223;437224 345589;345590;345591;345592 345589 4 TLDSVTELASEVSQLNTIK Unmodified 2047.0685 0.068480081 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS 2 0 2 2 97.559 92.786 2;3 1.2566E-64 114883 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 189.13 167.48 58580000 0 58580000 0 0 0 0 0 0 0 0 0 0 0 0 0 52080 2556 46755 437225;437226 345593;345594 345593 1 TLDTDLDGVVTFDLFK Unmodified 1797.9036 0.90364658 841 P07384 CAPN1 Calpain-1 catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS 2.38 0.484 5 3 4 4 98.523 93.404 2;3 1.6836E-58 117418 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 219.43 188.56 126350000 81424000 44922000 0 0 0 0 0 0 0 0 0 0 0 0 0 52081 841 46756 437227;437228;437229;437230;437231;437232;437233;437234 345595;345596;345597;345598;345599;345600;345601 345600 6 TLDTGETPSETK Unmodified 1277.5987 0.59869079 4981 Q9UKZ1 CNOT11 CCR4-NOT transcription complex subunit 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.163 21.368 2 2.3376E-14 21643 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 152.97 143.18 232550000 0 0 0 12793000 14658000 19484000 19108000 15690000 13453000 21584000 23299000 25864000 22064000 17798000 26756000 52082 4981 46757 437235;437236;437237;437238;437239;437240;437241;437242;437243;437244;437245;437246 345602;345603;345604;345605;345606;345607;345608;345609;345610;345611;345612;345613;345614 345608 13 TLEAEFNSPSPPTPEPGEGPRK Unmodified 2336.1285 0.12845458 6 A0MZ66 KIAA1598 Shootin-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 64.316 62.736 3 5.2697E-32 80299 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.983 84.224 254230000 16712000 46847000 77222000 4821800 7717000 10510000 8569700 0 7920600 12981000 16295000 0 10765000 13272000 20601000 52083 6 46758 437247;437248;437249;437250;437251;437252;437253;437254;437255;437256;437257;437258;437259;437260 345615;345616;345617;345618;345619;345620;345621;345622;345623;345624;345625;345626;345627;345628;345629;345630;345631;345632;345633;345634;345635 345620 21 TLEAFHDTCRQ Unmodified 1376.6143 0.61429805 2926 Q6P2C8 MED27 Mediator of RNA polymerase II transcription subunit 27 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 30.771 31.009 3 0.0021143 33808 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 56.225 51.582 110530000 0 0 0 0 6626200 10683000 7233300 10416000 6729900 9163000 8335300 9959400 19827000 10324000 11230000 52084 2926 46759 437261;437262;437263;437264;437265;437266;437267;437268;437269;437270;437271 345636;345637;345638;345639;345640 345639 4 TLEALEEGGGELNDFVSTAK Unmodified 2079.0008 0.0007944461 17 A3KN83 SBNO1 Protein strawberry notch homolog 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 84.425 84.545 2 4.1801E-07 97976 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 67.964 53.706 12406000 0 0 0 0 0 0 0 0 0 5518400 0 6887200 0 0 0 52085 17 46760 437272;437273 345641 345641 1 TLEANEMLLEK Unmodified 1289.6537 0.65370325 2817 Q5VU43 PDE4DIP Myomegalin yes yes 0 0 0 By MS/MS 2 0 1 1 72.89 67.346 2 0.0058509 85028 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.922 30.813 42890000 0 42890000 0 0 0 0 0 0 0 0 0 0 0 0 0 52086 2817 46761 437274 345642 345642 1 TLEAVLNFK Unmodified 1033.5808 0.5807963 3951 Q96Q05 TRAPPC9 Trafficking protein particle complex subunit 9 yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 82.261 78.636 2 0.03281 95205 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 65.038 37.901 24760000 0 20655000 4104800 0 0 0 0 0 0 0 0 0 0 0 0 52087 3951 46762 437275;437276 345643 345643 1 TLEDPDLNVR Unmodified 1170.5881 0.58806652 3170 Q86VP6 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 51.373 51.599 2 0.00635 57223 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.429 59.474 190700000 0 0 0 0 7635800 29191000 12213000 8823900 0 21680000 25290000 17300000 14882000 23904000 29782000 52088 3170 46763 437277;437278;437279;437280;437281;437282;437283;437284;437285;437286 345644;345645;345646;345647;345648;345649;345650;345651;345652 345647 8 TLEDPDLNVRR Unmodified 1326.6892 0.68917755 3170 Q86VP6 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 42.44 42.616 2;3 0.0011005 47728 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 109.42 85.128 722200000 0 0 0 29104000 23596000 91417000 32772000 34088000 23821000 64970000 94593000 70275000 51939000 61589000 144040000 52089 3170 46764 437287;437288;437289;437290;437291;437292;437293;437294;437295;437296;437297;437298;437299;437300;437301;437302;437303;437304;437305;437306;437307;437308;437309;437310 345653;345654;345655;345656;345657;345658;345659;345660;345661;345662;345663;345664;345665 345654 7 TLEEAVGNIVK Unmodified 1171.6449 0.64485312 5267 Q9Y678 COPG1 Coatomer subunit gamma-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 70.406 69.686 2 2.0061E-05 79167 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 124.23 83.201 2258200000 0 1851400000 18960000 13142000 14407000 36890000 20628000 23442000 21184000 40838000 33680000 51104000 29745000 53165000 49637000 52090 5267 46765 437311;437312;437313;437314;437315;437316;437317;437318;437319;437320;437321;437322;437323;437324;437325 345666;345667;345668;345669;345670;345671;345672;345673;345674;345675;345676;345677;345678;345679;345680;345681;345682 345670 16 TLEEDEEELFK Unmodified 1380.6297 0.62965657 1480 P43487 RANBP1 Ran-specific GTPase-activating protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.32 4.06 3 5 2 12 4 5 1 1 1 1 1 1 1 1 1 1 1 1 1 76.176 75.054 2 3.7523E-09 91145 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 153.05 144.82 7918400000 1244500000 6008500000 104640000 8185900 15795000 29142000 10363000 11017000 13971000 18314000 92768000 69357000 11756000 56025000 224080000 52091 1480 46766 437326;437327;437328;437329;437330;437331;437332;437333;437334;437335;437336;437337;437338;437339;437340;437341;437342;437343;437344;437345;437346;437347 345683;345684;345685;345686;345687;345688;345689;345690;345691;345692;345693;345694;345695;345696;345697;345698;345699;345700;345701;345702;345703;345704;345705;345706;345707;345708 345688 26 TLEEDVDDRAPSK Unmodified 1473.6947 0.69471644 2345 Q13823 GNL2 Nucleolar GTP-binding protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 31.808 31.811 3 2.4897E-05 34696 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 89.231 56.977 96650000 0 0 0 7541100 15533000 14897000 7836400 8145500 10079000 12305000 0 0 20314000 0 0 52092 2345 46767 437348;437349;437350;437351;437352;437353;437354;437355 345709;345710;345711;345712;345713;345714;345715;345716 345711 7 TLEEEAK Unmodified 818.40216 0.40216323 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 9.2885 8.5912 2 0.023725 7530 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 84.244 52.13 1295000000 54619000 495830000 2301300 58735000 77586000 73001000 91442000 62905000 56247000 31995000 90955000 67944000 48508000 28855000 54068000 52093 1356 46768 437356;437357;437358;437359;437360;437361;437362;437363;437364;437365;437366;437367;437368;437369;437370;437371 345717;345718;345719;345720;345721;345722;345723 345722 7 TLEEEFARK Unmodified 1121.5717 0.57168818 4365 Q9H2G2 SLK STE20-like serine/threonine-protein kinase yes yes 0 0 1 By MS/MS 2 0 1 1 40.47 36.86 2 0.043014 46876 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 84.368 34.814 39117000 0 0 39117000 0 0 0 0 0 0 0 0 0 0 0 0 52094 4365 46769 437372 345724 345724 1 TLEEILLER Unmodified 1114.6234 0.6233894 464 O75152 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.263 80.323 2 0.005264 93174 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 78.516 46.161 230860000 0 0 0 5426900 9062000 19739000 10437000 17735000 15881000 24899000 24842000 31318000 14972000 17787000 38761000 52095 464 46770 437373;437374;437375;437376;437377;437378;437379;437380;437381;437382;437383;437384 345725;345726;345727;345728;345729;345730 345729 6 TLEEPVSTEK Unmodified 1131.5659 0.5659341 4030 Q99590 SCAF11 Protein SCAF11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 28.905 29.017 2 0.002134 30996 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 86.136 39.8 22439000 0 0 0 0 6787200 0 5617200 0 0 0 0 10034000 0 0 0 52096 4030 46771 437385;437386;437387;437388;437389;437390;437391;437392 345731;345732;345733;345734;345735;345736;345737;345738 345737 8 TLEEQGVAHNVK Unmodified 1323.6783 0.67827852 5226 Q9Y5A7 NUB1 NEDD8 ultimate buster 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.71 2.89 3 1 20 1 2 1 2 2 1 2 1 2 1 2 2 1 2 2 23.001 22.468 2;3 0.00087681 22282 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.233 56.002 384200000 7691600 197940000 14615000 10430000 7792700 12880000 8877500 8092600 9117600 14914000 21440000 20854000 11805000 12359000 25394000 52097 5226 46772 437393;437394;437395;437396;437397;437398;437399;437400;437401;437402;437403;437404;437405;437406;437407;437408;437409;437410;437411;437412;437413;437414;437415;437416 345739;345740;345741;345742;345743;345744;345745;345746;345747;345748;345749;345750;345751;345752;345753;345754 345743 16 TLEFAGQDLSAYLLK Unmodified 1667.877 0.8770379 4406 Q9H568 ACTL8 Actin-like protein 8 yes yes 0 0 0 By MS/MS 2 0 1 1 97.292 92.519 2 1.4768E-05 114571 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.434 53.849 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52098 4406 46773 437417 345755 345755 1 TLEFCLSR Unmodified 1024.5012 0.50116577 3640 Q92615 LARP4B La-related protein 4B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 67.025 67.177 2 0.014169 76685 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 70.919 33.898 42322000 0 0 0 0 2254200 3434500 3741200 3032100 3297600 3640700 3906500 3873100 4497700 3603200 7040700 52099 3640 46774 437418;437419;437420;437421;437422;437423;437424;437425;437426;437427;437428 345756;345757;345758;345759;345760;345761;345762;345763;345764 345760 9 TLEFELEALNDK Unmodified 1420.7086 0.70857559 2581 Q15811;CON__ENSEMBL:ENSBTAP00000001528 ITSN1 Intersectin-1 yes no 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 88.135 81.649 2 3.4984E-05 103298 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.6 106.4 + 24211000 5003600 19208000 0 0 0 0 0 0 0 0 0 0 0 0 0 52100 2581 46775 437429;437430 345765;345766 345765 2 TLEFELEALNDKK Unmodified 1548.8035 0.80353861 2581 Q15811;CON__ENSEMBL:ENSBTAP00000001528 ITSN1 Intersectin-1 yes no 0 0 1 By MS/MS 2 0 1 1 83.904 75.774 3 0.013551 99084 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.785 27.842 + 7416200 7416200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52101 2581 46776 437431 345767 345767 1 TLEGDGDQER Unmodified 1118.484 0.48399538 3226 Q8IVF2 AHNAK2 Protein AHNAK2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 9.5632 9.6715 2 0.0056762 7112 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 67.993 51.79 19630000 0 0 0 1614300 1408700 1436500 2495600 0 1151700 1391300 0 3600500 2088400 1714100 2729200 52102 3226 46777 437432;437433;437434;437435;437436;437437;437438;437439;437440;437441 345768;345769;345770;345771;345772;345773;345774;345775;345776;345777;345778 345774 11 TLEGEFSVTMWSSDEK Oxidation (M) 1860.8088 0.80875992 1190 P25490 YY1 Transcriptional repressor protein YY1 yes yes 0 1 0 By MS/MS 2 0 1 1 82.879 74.748 2 0.00061774 97786 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.314 70.306 7270800 7270800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52103 1190 46778 437442 345779 345779 1723 1 TLEGIAAVSQELK Unmodified 1357.7453 0.74529545 2924 Q6P1R4 DUS1L tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 81.821 78.305 2 0.012662 93625 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 69.672 40.585 177410000 0 166140000 11271000 0 0 0 0 0 0 0 0 0 0 0 0 52104 2924 46779 437443;437444;437445 345780;345781;345782 345781 3 TLEGQAQETAVAQR Unmodified 1500.7532 0.75323437 3226 Q8IVF2 AHNAK2 Protein AHNAK2 yes yes 0 0 0 By matching By MS/MS By matching By matching By matching By MS/MS 10 0 7 1 1 1 1 1 2 35.71 35.993 2 0.0045853 38702 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.344 42.073 15801000 0 0 0 1494300 0 0 2319600 0 0 3605700 2438700 3984400 0 0 1958200 52105 3226 46780 437446;437447;437448;437449;437450;437451;437452 345783;345784 345784 2 TLEGQAQETAVAQRK Unmodified 1628.8482 0.84819739 3226 Q8IVF2 AHNAK2 Protein AHNAK2 yes yes 0 0 1 By MS/MS 2 0 1 1 33.886 30.58 3 0.010997 38725 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 26.209 13.826 6752100 0 0 6752100 0 0 0 0 0 0 0 0 0 0 0 0 52106 3226 46781 437453 345785 345785 1 TLEGVITR Unmodified 887.50763 0.50763136 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 42.54 42.594 2 0.0093409 46886 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 83.206 32.24 292610000 0 0 0 36481000 27100000 44058000 0 35708000 0 49973000 0 61558000 0 37734000 0 52107 3676 46782 437454;437455;437456;437457;437458;437459;437460 345786;345787;345788;345789;345790;345791 345789 6 TLEHLPIPTK Unmodified 1147.6601 0.66010926 4254 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6 4 4 4 2 1 1 1 1 1 1 62.264 59.062 2;3 0.0020459 77886 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.672 47.913 148390000 64699000 27566000 25416000 5842100 0 0 0 0 0 5733500 0 7714700 0 0 11423000 52108 4254 46783 437461;437462;437463;437464;437465;437466;437467;437468 345792;345793;345794;345795;345796;345797;345798 345792 5 TLEHLQLSHDQLLEVK Unmodified 1902.0211 0.021076378 1702 P52789 HK2 Hexokinase-2 yes yes 0 0 0 By MS/MS 2 0 1 1 79.716 71.585 4 0.0022649 94037 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.397 46.021 16801000 16801000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52109 1702 46784 437469 345799 345799 1 TLEIALEQK Unmodified 1043.5863 0.58627561 3217 Q8IUD2 ERC1 ELKS/Rab6-interacting/CAST family member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 58.159 58.446 2 0.00355 66768 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 89.698 9.2599 41193000 0 0 0 0 0 3114700 0 0 2585600 4909600 5502600 6810000 4105700 4927700 9237200 52110 3217 46785 437470;437471;437472;437473;437474;437475;437476;437477 345800;345801;345802;345803;345804;345805;345806 345805 7 TLELQGLINDLQR Unmodified 1511.8308 0.83075641 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 90.861 91.011 2 2.3073E-05 105524 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 90.108 71.328 4936300 0 0 0 0 0 0 0 1721800 0 1745800 0 0 0 0 1468700 52111 1029 46786 437478;437479;437480 345807;345808;345809 345809 3 TLENDEEQEALPSLDK Unmodified 1829.8531 0.85306758 2797 Q5TFE4 NT5DC1 5'-nucleotidase domain-containing protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 63.614 63.755 2 7.7512E-20 72126 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.38 101.97 61343000 0 0 0 2449200 0 5965600 2553100 0 2056700 5319100 9830700 9879500 0 5509400 17779000 52112 2797 46787 437481;437482;437483;437484;437485;437486;437487;437488;437489;437490 345810;345811;345812;345813;345814;345815;345816;345817 345813 8 TLENPVNVYNPSHSDSLASQQSVASHPR Unmodified 3033.454 0.45403924 242 O15027 SEC16A Protein transport protein Sec16A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 63.169 63.338 4 4.9193E-72 72360 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 114.68 108.17 179160000 0 0 0 0 7263100 14710000 0 13474000 10398000 18789000 18837000 26751000 13346000 23678000 31914000 52113 242 46788 437491;437492;437493;437494;437495;437496;437497;437498;437499;437500 345818;345819;345820;345821;345822;345823;345824;345825;345826;345827;345828;345829;345830 345819 13 TLENQSHETLERENQECPR Unmodified 2369.0666 0.066599375 1549 P48681 NES Nestin yes yes 0 0 1 By matching By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 28.034 28.364 4 0.00056466 30704 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 47.752 44.911 25403000 0 0 0 0 0 0 0 0 7562400 6423600 0 0 6799800 0 4617100 52114 1549 46789 437501;437502;437503;437504 345831;345832 345832 2 TLENSPISSCDTSDTEGPVPVNSAAVLK Unmodified 2887.3757 0.37569707 3339 Q8N556 AFAP1 Actin filament-associated protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 78.881 78.587 3 0.00047714 90915 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 26.187 19.464 5873000 0 0 0 0 5873000 0 0 0 0 0 0 0 0 0 0 52115 3339 46790 437505 345833 345833 1 TLEPICDADPSALAK Unmodified 1599.7814 0.78142296 2786 Q5T8P6 RBM26 RNA-binding protein 26 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 70.925 70.63 2 1.1506E-07 87617 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.86 92.474 121980000 0 1581100 0 6597200 9169700 8377500 7116000 9225200 9410700 12824000 13015000 21622000 12127000 10910000 0 52116 2786 46791 437506;437507;437508;437509;437510;437511;437512;437513;437514;437515;437516;437517;437518 345834;345835;345836;345837;345838;345839;345840;345841;345842;345843;345844;345845;345846;345847;345848;345849 345837 16 TLEPLETEGATR Unmodified 1315.662 0.66195975 3547 Q8WUI4 HDAC7 Histone deacetylase 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 47.446 47.373 2 0.00050512 53348 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 78.655 52.271 30604000 0 0 0 3927900 3362300 3880400 4811200 4882400 4276200 5463900 0 0 0 0 0 52117 3547 46792 437519;437520;437521;437522;437523;437524;437525;437526 345850;345851;345852;345853;345854;345855;345856;345857;345858;345859 345852 10 TLEPQELAR Unmodified 1055.5611 0.56112349 3576 Q8WWM7 ATXN2L Ataxin-2-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.419 45.589 2 0.0034222 51100 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 94.114 50.991 237770000 0 0 0 16536000 13242000 16172000 16947000 13832000 11187000 23744000 21777000 24132000 22817000 21447000 35933000 52118 3576 46793 437527;437528;437529;437530;437531;437532;437533;437534;437535;437536;437537;437538 345860;345861;345862;345863;345864;345865;345866;345867;345868;345869 345864 10 TLEPSGEASTSLGR Unmodified 1403.6892 0.68923713 3212 Q86YV9 HPS6 Hermansky-Pudlak syndrome 6 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 40.661 40.932 2 1.0152E-13 45449 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 124.1 96.774 77059000 0 0 0 0 6030700 8356600 0 7224700 0 12071000 10830000 12663000 10310000 0 9572700 52119 3212 46794 437539;437540;437541;437542;437543;437544;437545;437546;437547 345870;345871;345872;345873;345874;345875;345876;345877;345878 345871 9 TLEQALQLAR Unmodified 1141.6455 0.64552182 2086 Q03001 DST Dystonin yes yes 0 0 0 By MS/MS 10 0 1 1 71.515 71.665 2 0.0076455 82411 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 61.962 38.007 1414900 0 0 0 0 0 0 1414900 0 0 0 0 0 0 0 0 52120 2086 46795 437548 345879 345879 1 TLEQHDNIVTHYK Unmodified 1596.7896 0.78961988 430 O60763 USO1 General vesicular transport factor p115 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.85 3.86 7 1 12 3 2 3 1 1 1 1 1 1 1 1 1 1 1 1 32.756 31.055 3;4 3.8057E-09 47273 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.759 86.607 982690000 488620000 42455000 146360000 14769000 9636300 32968000 24675000 20171000 12669000 34441000 30367000 29554000 27600000 25984000 42429000 52121 430 46796 437549;437550;437551;437552;437553;437554;437555;437556;437557;437558;437559;437560;437561;437562;437563;437564;437565;437566;437567;437568 345880;345881;345882;345883;345884;345885;345886;345887;345888;345889;345890;345891;345892;345893;345894;345895;345896;345897;345898;345899;345900;345901;345902;345903;345904 345889 21 TLEQLAQQGK Unmodified 1114.5982 0.59823728 4829 Q9P2W1 PSMC3IP Homologous-pairing protein 2 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 7 3.69 1 1 3 2 2 1 44.187 40.985 2 1.0206E-05 48416 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.26 91.265 168780000 0 98761000 0 0 0 0 0 0 0 0 0 0 0 70019000 0 52122 4829 46797 437569;437570;437571;437572;437573 345905;345906;345907;345908 345905 4 TLESQAVETEK Unmodified 1233.6089 0.60886155 4687 Q9NVX2 NLE1 Notchless protein homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 5.4 3.77 2 1 2 1 2 1 1 29.177 27.3 2 4.3169E-05 34529 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.25 113.38 120710000 0 103550000 0 0 0 0 0 0 0 0 0 4904200 0 0 12261000 52123 4687 46798 437574;437575;437576;437577;437578 345909;345910;345911;345912;345913 345909 5 TLESSIQGLRIM Oxidation (M) 1362.7177 0.71770049 3655 Q92747 ARPC1A Actin-related protein 2/3 complex subunit 1A yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 80.91 75.558 2 0.00011023 93598 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 113.22 65.396 24512000 17060000 0 7451400 0 0 0 0 0 0 0 0 0 0 0 0 52124 3655 46799 437579;437580 345914;345915 345915 5173 2 TLESTWEK Unmodified 992.48148 0.48147619 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.976 37.105 2 0.017697 40964 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 65.246 37.028 735510000 0 0 0 34937000 58194000 51983000 48982000 64208000 60869000 68577000 75637000 0 82184000 66055000 123880000 52125 213 46800 437581;437582;437583;437584;437585;437586;437587;437588;437589;437590;437591;437592 345916;345917;345918;345919;345920;345921;345922;345923;345924;345925;345926 345918 9 TLESTWEKPQELK Unmodified 1587.8144 0.81443765 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 2 2 2 2 1 2 2 2 2 2 53.923 54.1 2;3 8.3993E-10 61435 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 106.32 86.719 333230000 0 0 0 25255000 32253000 0 41185000 34113000 0 21194000 40644000 63583000 22789000 26145000 26070000 52126 213 46801 437593;437594;437595;437596;437597;437598;437599;437600;437601;437602;437603;437604;437605;437606;437607;437608;437609;437610;437611 345927;345928;345929;345930;345931;345932;345933;345934;345935;345936;345937;345938;345939;345940;345941;345942;345943;345944 345930 16 TLETLIR Unmodified 844.50182 0.5018177 1183 P25205 MCM3 DNA replication licensing factor MCM3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.12 55.251 2 0.023384 61886 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 88.029 16.669 344320000 0 0 0 14689000 15060000 23876000 20255000 18243000 13050000 27240000 41219000 46510000 24296000 31262000 68618000 52127 1183 46802 437612;437613;437614;437615;437616;437617;437618;437619;437620;437621;437622;437623 345945;345946;345947;345948 345948 4 TLETLPEK Unmodified 929.50696 0.50696266 865 P08397 HMBS Porphobilinogen deaminase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 39.132 34.091 2 0.0035079 44676 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.29 76.291 320170000 13900000 302390000 3883900 0 0 0 0 0 0 0 0 0 0 0 0 52128 865 46803 437624;437625;437626 345949 345949 1 TLETLQQR Unmodified 987.53491 0.53490874 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 2 2 2 1 1 2 2 23.035 23.208 2 0.0065186 28362 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 100.19 44.512 952970000 0 0 0 246360000 55332000 55726000 74330000 137790000 51428000 98246000 87950000 12531000 14152000 68622000 50505000 52129 2291 46804 437627;437628;437629;437630;437631;437632;437633;437634;437635;437636;437637;437638;437639;437640;437641;437642;437643;437644;437645;437646;437647;437648 345950;345951;345952;345953;345954;345955;345956 345954 7 TLETQPLAPDCCPSDQDPAPAHPSPHASPMNK Unmodified 3465.5388 0.53877321 4169 Q9BUR4 WRAP53 Telomerase Cajal body protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 59.637 55.853 4 6.4252E-10 69614 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 49.968 48.264 8424000 0 0 8424000 0 0 0 0 0 0 0 0 0 0 0 0 52130 4169 46805 437649 345957;345958 345958 2 TLETQSALGPALQAAFK Unmodified 1744.9359 0.93594977 665 O95486 SEC24A Protein transport protein Sec24A yes yes 0 0 0 By MS/MS By MS/MS 4.67 3.77 2 1 2 1 90.696 85.8 2;3 8.2206E-13 106419 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.24 97.23 51255000 0 51255000 0 0 0 0 0 0 0 0 0 0 0 0 0 52131 665 46806 437650;437651;437652 345959;345960;345961 345959 3 TLETVPLER Unmodified 1056.5815 0.58152458 1141 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 51.836 52.213 2 0.0080109 58384 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 70.856 23.257 163810000 0 0 0 0 0 0 11849000 0 10416000 0 31359000 35511000 0 23857000 50820000 52132 1141 46807 437653;437654;437655;437656;437657;437658 345962;345963;345964;345965 345965 3 TLETVPLERK Unmodified 1184.6765 0.6764876 1141 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.74 3.85 1 4 3 11 3 3 2 1 1 1 1 1 1 1 1 1 1 1 46.25 44.735 2;3 0.00099868 51885 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 94.692 67.363 1411900000 51566000 301230000 698860000 16907000 10996000 0 22897000 18651000 16765000 28939000 55572000 44860000 29640000 44837000 70161000 52133 1141 46808 437659;437660;437661;437662;437663;437664;437665;437666;437667;437668;437669;437670;437671;437672;437673;437674;437675;437676;437677 345966;345967;345968;345969;345970;345971;345972;345973;345974;345975;345976;345977;345978 345973 8 TLETVPLERKK Unmodified 1312.7715 0.77145062 1141 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes yes 0 0 2 By MS/MS 2 0 1 1 41.114 34.434 3 0.02059 47663 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.451 51.314 12660000 12660000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52134 1141 46809 437678 345979 345979 0 TLEVEIEPGVR Unmodified 1240.6663 0.66631685 4855 Q9UBS4 DNAJB11 DnaJ homolog subfamily B member 11 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 67.034 67.141 2 0.0075505 76860 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 53.751 17.807 10950000 0 0 0 0 1302100 0 0 0 0 0 2931100 4259100 0 2457300 0 52135 4855 46810 437679;437680;437681;437682 345980;345981 345981 2 TLEVLTK Unmodified 802.48002 0.48001963 2786 Q5T8P6 RBM26 RNA-binding protein 26 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41.753 40.766 2 0.018994 52373 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.39 8.8709 948300000 12448000 189650000 10867000 56342000 53385000 53262000 56837000 57032000 43628000 73816000 65085000 95261000 76999000 48663000 55019000 52136 2786 46811 437683;437684;437685;437686;437687;437688;437689;437690;437691;437692;437693;437694;437695;437696;437697 345982;345983;345984;345985;345986 345982 5 TLFANTGGTVK Unmodified 1107.5924 0.59242362 4960 Q9UKA9 PTBP2 Polypyrimidine tract-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.997 44.171 2 2.0677E-05 48397 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 123.86 93.675 464630000 0 0 0 14978000 17984000 41075000 34670000 25940000 27334000 38947000 47297000 36744000 43227000 44217000 92219000 52137 4960 46812 437698;437699;437700;437701;437702;437703;437704;437705;437706;437707;437708;437709 345987;345988;345989;345990;345991;345992;345993;345994;345995;345996;345997;345998;345999;346000 345996 14 TLFGFLGK Unmodified 881.50109 0.50108942 2115 Q05519 SRSF11 Serine/arginine-rich splicing factor 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 84.839 84.905 2 0.047391 97864 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.849 29.043 343930000 0 0 0 11959000 18622000 34953000 22959000 25435000 34077000 25652000 24308000 28104000 25021000 26296000 66546000 52138 2115 46813 437710;437711;437712;437713;437714;437715;437716;437717;437718;437719;437720;437721 346001 346001 1 TLFGLHLSQK Unmodified 1142.6448 0.64479354 1307 P31939 ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes yes 0 0 0 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 68.6 68.943 3 0.03754 78247 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.417 26.711 35125000 0 0 0 0 0 0 0 0 0 0 3429600 6168900 0 1847400 23679000 52139 1307 46814 437722;437723;437724;437725 346002 346002 1 TLFGQLK Unmodified 805.46979 0.46978929 4292 Q9C0I1 MTMR12 Myotubularin-related protein 12 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 66.91 59.804 2 0.040406 80251 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.555 20.914 60650000 39302000 21348000 0 0 0 0 0 0 0 0 0 0 0 0 0 52140 4292 46815 437726;437727 346003 346003 1 TLFGRDLLDDLK Unmodified 1404.7613 0.76127986 873 P08758 ANXA5 Annexin A5 yes yes 0 0 1 By MS/MS 2 0 1 1 88.619 86.174 3 0.02734 104351 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 42.809 23.415 5996900 0 0 5996900 0 0 0 0 0 0 0 0 0 0 0 0 52141 873 46816 437728 346004 346004 1 TLFIGNLEK Unmodified 1033.5808 0.5807963 3999 Q96T58 SPEN Msx2-interacting protein yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 73.13 73.152 2 0.02342 84624 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 51.066 31.43 28045000 0 0 0 1815600 1862500 3778700 2305200 0 0 0 4213800 4464300 4246100 0 5359200 52142 3999 46817 437729;437730;437731;437732;437733;437734;437735;437736 346005 346005 1 TLFLAVQVQNEEGK Unmodified 1574.8304 0.83042206 661 O95433 AHSA1 Activator of 90 kDa heat shock protein ATPase homolog 1 yes yes 0 0 0 By MS/MS By MS/MS 3 0 2 1 1 81.73 78.218 2 0.0052417 79016 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 84.479 77.79 6783000 4849300 1933800 0 0 0 0 0 0 0 0 0 0 0 0 0 52143 661 46818 437737;437738 346006 346006 0 TLFPFEAEAYR Unmodified 1342.6558 0.65575216 2310 Q13535 ATR Serine/threonine-protein kinase ATR yes yes 0 0 0 By MS/MS 10 0 1 1 83.945 83.973 2 0.016526 97299 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 43.282 28.615 2798500 0 0 0 0 0 2798500 0 0 0 0 0 0 0 0 0 52144 2310 46819 437739 346007 346007 1 TLFPGTDHIDQLK Unmodified 1483.7671 0.76709352 2611 Q16539 MAPK14 Mitogen-activated protein kinase 14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 70.194 70.271 3 0.022812 80026 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.434 34.316 34703000 0 0 0 1737100 0 6556100 2965700 4340000 0 4264600 5234500 5152100 0 4453100 0 52145 2611 46820 437740;437741;437742;437743;437744;437745;437746;437747;437748 346008;346009 346009 2 TLFPLIEAK Unmodified 1030.6063 0.60628277 974 P13010 XRCC5 X-ray repair cross-complementing protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 4 2 12 3 2 1 1 1 1 1 1 1 1 1 1 1 1 1 85.401 83.757 2 0.0039527 96744 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 97.431 87.016 7191300000 2966200000 2068600000 552110000 37740000 34088000 88214000 100860000 87835000 101630000 150410000 169480000 175680000 119520000 158240000 380740000 52146 974 46821 437749;437750;437751;437752;437753;437754;437755;437756;437757;437758;437759;437760;437761;437762;437763;437764;437765;437766 346010;346011;346012;346013;346014;346015;346016;346017;346018;346019;346020;346021;346022;346023;346024;346025;346026 346025 16 TLFQIQAER Unmodified 1104.5928 0.59275797 2599 Q16222 UAP1 UDP-N-acetylhexosamine pyrophosphorylase;UDP-N-acetylgalactosamine pyrophosphorylase;UDP-N-acetylglucosamine pyrophosphorylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 63.504 63.872 2 0.03116 72066 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.869 20.732 28128000 0 0 0 0 0 0 0 0 0 0 6888400 0 0 5747800 15491000 52147 2599 46822 437767;437768;437769 346027;346028 346027 2 TLFQPQTGAYQTLAK Unmodified 1665.8726 0.87262123 1729 P53992 SEC24C Protein transport protein Sec24C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74.586 73.513 2 2.2404E-07 92019 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 142.47 98.447 338130000 109920000 111810000 3615300 6324700 4613100 15852000 7764300 0 5855700 12069000 9386800 13239000 7851700 13084000 16748000 52148 1729 46823 437770;437771;437772;437773;437774;437775;437776;437777;437778;437779;437780;437781;437782;437783;437784 346029;346030;346031;346032;346033;346034;346035;346036;346037;346038;346039;346040;346041;346042;346043 346032 15 TLFVSGLPLDIK Unmodified 1301.7595 0.75948895 3707 Q93062 RBPMS RNA-binding protein with multiple splicing yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 91.177 91.319 2 0.0063596 105917 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 51.436 36.285 18691000 0 0 0 0 0 1326600 916980 1406700 1268300 2452900 2233300 1271000 0 1708700 6106900 52149 3707 46824 437785;437786;437787;437788;437789;437790;437791;437792;437793 346044;346045;346046;346047;346048 346048 5 TLGDFAAEYAK Unmodified 1184.5714 0.57135383 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 67.709 66.166 2 0.0047854 84823 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.655 68.668 2702600000 53222000 1673200000 37678000 36953000 39277000 73710000 70038000 54099000 53851000 87555000 117350000 113560000 74499000 83547000 134100000 52150 894 46825 437794;437795;437796;437797;437798;437799;437800;437801;437802;437803;437804;437805;437806;437807;437808;437809;437810 346049;346050;346051;346052;346053;346054;346055;346056;346057;346058;346059;346060;346061;346062;346063;346064;346065;346066 346054 14 TLGDLVR Unmodified 772.4443 0.44430282 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 45.208 45.32 2 0.024641 49356 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.386 31.847 176200000 0 0 0 13820000 18022000 19763000 16584000 20590000 9552900 0 3086400 0 24186000 18639000 31960000 52151 3641 46826 437811;437812;437813;437814;437815;437816;437817;437818;437819;437820 346067;346068 346068 1 TLGECGFTSQTAR Unmodified 1426.6511 0.65107749 2523 Q15370 TCEB2 Transcription elongation factor B polypeptide 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 41.975 42.097 2 0.00075647 45956 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.977 54.839 8945400 0 0 0 0 2627400 0 0 0 0 0 0 0 0 0 6318000 52152 2523 46827 437821;437822;437823 346069;346070;346071;346072 346070 4 TLGECGFTSQTARPQAPATVGLAFR Unmodified 2635.3177 0.3176691 2523 Q15370 TCEB2 Transcription elongation factor B polypeptide 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.813 78.871 3 8.0852E-109 91272 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 161.66 153.95 503030000 0 0 0 5786500 10323000 47130000 8720300 33102000 17141000 41065000 47055000 53566000 13003000 25727000 200410000 52153 2523 46828 437824;437825;437826;437827;437828;437829;437830;437831;437832;437833;437834;437835 346073;346074;346075;346076;346077;346078;346079;346080;346081;346082;346083;346084;346085;346086;346087;346088 346086 16 TLGELQLYR Unmodified 1091.5975 0.597509 2570;2305 Q15742;Q13506 NAB2;NAB1 NGFI-A-binding protein 2;NGFI-A-binding protein 1 no no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 68.422 68.642 2 0.0050719 78709 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 84.498 62.006 70972000 0 0 0 0 0 10045000 0 8852400 5684400 13519000 0 13742000 0 0 19130000 52154 2570;2305 46829 437836;437837;437838;437839;437840;437841 346089;346090;346091;346092 346089 4 TLGETSANAETEQNK Unmodified 1591.7326 0.73255851 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 20.442 20.251 2 3.99E-41 19798 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 158.31 146.77 220680000 5561000 0 0 13339000 16015000 19867000 13470000 12749000 13412000 13186000 21829000 27101000 20193000 22296000 21662000 52155 2804 46830 437842;437843;437844;437845;437846;437847;437848;437849;437850;437851;437852;437853;437854 346093;346094;346095;346096;346097;346098;346099;346100;346101;346102 346099 10 TLGETSANAETEQNKK Unmodified 1719.8275 0.82752153 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 14.778 14.971 3 2.4412E-06 14581 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 67.646 44.165 54220000 0 0 0 5358500 2930200 0 6110300 0 2115000 5835000 5036000 5184000 6891000 6701900 8058300 52156 2804 46831 437855;437856;437857;437858;437859;437860;437861;437862;437863;437864 346103;346104;346105;346106;346107;346108;346109;346110;346111 346110 9 TLGFNLESGWGSGR Unmodified 1479.7106 0.71064128 2411 Q14527 HLTF Helicase-like transcription factor yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 82.316 82.451 2 9.7585E-08 94640 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 93.258 74.946 56143000 0 0 0 0 0 5195000 0 3623700 6261400 5656200 4449300 6470700 4819200 4888800 14779000 52157 2411 46832 437865;437866;437867;437868;437869;437870;437871;437872;437873 346112;346113;346114;346115;346116;346117;346118;346119;346120 346118 8 TLGGLEMELR Unmodified 1117.5801 0.58014438 5206 Q9Y4L1 HYOU1 Hypoxia up-regulated protein 1 yes yes 0 0 0 By matching By matching By matching By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 74.144 74.329 2 0.009563 85055 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.55 36.925 21436000 0 0 0 0 0 1285600 1701600 0 0 0 3640500 4552900 0 2721700 7533600 52158 5206 46833 437874;437875;437876;437877;437878;437879 346121 346121 1 TLGHNLLVSELYNQLK Unmodified 1841.0047 0.0046980325 2331 Q13619 CUL4A Cullin-4A yes yes 0 0 0 By MS/MS 3 0 1 1 91.696 88.477 3 0.035551 105935 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 26.781 19.001 2711700 0 2711700 0 0 0 0 0 0 0 0 0 0 0 0 0 52159 2331 46834 437880 346122 346122 1 TLGILGLGR Unmodified 898.56 0.56000128 304 O43175 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.187 78.248 2 0.0030241 89333 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 91.626 36.185 740030000 0 0 0 29708000 24538000 75791000 48787000 44517000 40863000 77291000 74323000 97474000 58654000 55777000 112300000 52160 304 46835 437881;437882;437883;437884;437885;437886;437887;437888;437889;437890;437891;437892 346123;346124;346125;346126;346127;346128;346129;346130;346131;346132;346133;346134 346130 12 TLGIRGPEDVAK Unmodified 1254.6932 0.6932003 1441 P41252 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 45.137 44.281 3 0.0038014 48737 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 52.79 30.316 2156800000 1082300000 485150000 0 0 31371000 65863000 38095000 38476000 47555000 46485000 34946000 67219000 36337000 50829000 132170000 52161 1441 46836 437893;437894;437895;437896;437897;437898;437899;437900;437901;437902;437903;437904;437905 346135;346136;346137;346138;346139;346140;346141;346142 346141 6 TLGNVTYMSQVLIQCAGSEEK Unmodified 2327.1137 0.11373249 2379 Q14155 ARHGEF7 Rho guanine nucleotide exchange factor 7 yes yes 0 0 0 By MS/MS 2 0 1 1 93.013 84.883 3 0.00012519 109975 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.454 45.462 14004000 14004000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52162 2379 46837 437906 346143 346143 0 TLGPGAEEK Unmodified 900.45526 0.45526144 4489 Q9HAU0 PLEKHA5 Pleckstrin homology domain-containing family A member 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 14.827 14.999 2 0.022062 14776 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 51.736 30.054 23368000 0 0 0 0 1076600 1846000 2214600 0 1339900 2693600 3224500 0 4695500 2490000 3787500 52163 4489 46838 437907;437908;437909;437910;437911;437912;437913;437914;437915 346144;346145;346146 346146 3 TLGSGACGEVK Unmodified 1077.5125 0.51245874 715 O96017 CHEK2 Serine/threonine-protein kinase Chk2 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 20.481 20.072 2 0.002306 25490 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.355 48.334 179780000 0 137890000 0 2447500 0 4610900 2945900 2086400 1811500 3594200 5722200 4572300 2301100 4186900 7609300 52164 715 46839 437916;437917;437918;437919;437920;437921;437922;437923;437924;437925;437926;437927;437928 346147;346148;346149;346150;346151;346152;346153 346150 7 TLGTGSFGR Unmodified 894.45593 0.45593014 1144;1056 P17612;P22694 PRKACA;PRKACB cAMP-dependent protein kinase catalytic subunit alpha;cAMP-dependent protein kinase catalytic subunit beta no no 0 0 0 By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 35.278 35.333 2 0.0047986 38771 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 85.666 50.735 150340000 0 0 0 0 13859000 25774000 22925000 18995000 16320000 24378000 0 0 28084000 0 0 52165 1056;1144 46840 437929;437930;437931;437932;437933;437934;437935 346154;346155;346156;346157 346155 4 TLGTMIAGDTSGDYRR Oxidation (M) 1728.8101 0.81009732 1100 P20073 ANXA7 Annexin A7 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 2 2 2 2 2 2 2 2 2 2 43.164 43.384 3 5.9106E-24 47871 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 119.32 106.9 374960000 0 0 0 22615000 0 50346000 28870000 22743000 0 47758000 44338000 49334000 31376000 38004000 39578000 52166 1100 46841 437936;437937;437938;437939;437940;437941;437942;437943;437944;437945;437946;437947;437948;437949;437950;437951;437952;437953;437954;437955 346158;346159;346160;346161;346162;346163;346164;346165;346166;346167;346168;346169;346170;346171;346172;346173;346174;346175;346176;346177;346178;346179 346165 1583 22 TLGTMIAGDTSGDYRR Unmodified 1712.8152 0.8151827 1100 P20073 ANXA7 Annexin A7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 53.807 54.01 3 0.00022188 59995 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.673 53.397 100030000 0 0 0 4400000 0 13558000 0 10109000 5843900 9133100 11614000 9361600 0 9092600 26921000 52167 1100 46841 437956;437957;437958;437959;437960;437961;437962;437963;437964 346180;346181;346182;346183;346184;346185;346186;346187;346188 346182 9 TLGTPDEVVWPGVTSMPDYKPSFPK Oxidation (M) 2763.3466 0.3465692 1180 P24941 CDK2 Cyclin-dependent kinase 2 yes yes 0 1 1 By MS/MS 10 0 1 1 85.021 85.2 3 5.1929E-08 98441 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.728 40.617 7173600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7173600 52168 1180 46842 437965 346189 346189 1711 1 TLGVDFIDVATK Unmodified 1277.6867 0.68671794 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 84.937 83.82 2 2.621E-05 97310 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 94.616 64.362 445770000 23477000 218390000 33338000 5161700 7754500 12623000 9576800 10575000 8910800 15751000 18435000 21025000 9631500 16101000 35016000 52169 1300 46843 437966;437967;437968;437969;437970;437971;437972;437973;437974;437975;437976;437977;437978;437979;437980;437981 346190;346191;346192;346193;346194;346195;346196;346197;346198;346199;346200;346201;346202 346195 13 TLGVDLVALATR Unmodified 1227.7187 0.71868677 1224 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 87.827 87.979 2 0.0027969 101734 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.067 33.022 5546200 0 0 0 0 0 0 0 0 802270 966730 0 0 0 0 3777200 52170 1224 46844 437982;437983;437984 346203 346203 1 TLGVSFVQAESECR Unmodified 1581.7457 0.74570615 434 O60826 CCDC22 Coiled-coil domain-containing protein 22 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 71.059 71.179 2 4.8153E-05 81942 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 100.72 90.769 46514000 0 0 0 1485300 0 5803800 3293000 3146500 2845400 5802200 4378500 5888300 3241500 3253000 7376800 52171 434 46845 437985;437986;437987;437988;437989;437990;437991;437992;437993;437994;437995 346204;346205;346206;346207;346208;346209;346210;346211;346212;346213;346214 346204 11 TLGWEALLAR Unmodified 1128.6291 0.62914348 2603 Q16512 PKN1 Serine/threonine-protein kinase N1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 87.88 87.982 2 0.0087229 101751 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.35 38.05 6005700 0 0 0 0 0 1295900 0 0 0 0 0 0 0 826710 3883100 52172 2603 46846 437996;437997;437998 346215 346215 1 TLHCEGTEINSDDEQESK Unmodified 2090.8699 0.86985663 4079 Q9BPX3 NCAPG Condensin complex subunit 3 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 27.731 23.436 3 2.6769E-64 30962 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.83 118.79 18879000 0 18879000 0 0 0 0 0 0 0 0 0 0 0 0 0 52173 4079 46847 437999;438000 346216;346217 346216 2 TLHETVNFSGVK Unmodified 1330.6881 0.68811492 4862 Q9UBW7 ZMYM2 Zinc finger MYM-type protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 5 10 2 1 2 1 1 1 1 1 1 1 1 1 1 49.829 47.937 2;3 1.992E-13 67043 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 154.05 118.11 254140000 123060000 37131000 45825000 1655600 2567100 3713100 4633600 0 2480300 0 3584000 10959000 5379000 3781400 9367900 52174 4862 46848 438001;438002;438003;438004;438005;438006;438007;438008;438009;438010;438011;438012;438013;438014;438015 346218;346219;346220;346221;346222;346223 346222 3 TLHGQETYTPR Unmodified 1301.6364 0.6364137 4163 Q9BUK6 MSTO1 Protein misato homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 19.546 19.778 3 0.0041786 20142 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 56.225 42.261 161260000 0 0 0 0 11173000 14927000 13676000 8992500 9628600 14865000 22148000 17094000 14041000 12830000 21885000 52175 4163 46849 438016;438017;438018;438019;438020;438021;438022;438023;438024;438025;438026 346224;346225;346226;346227 346225 3 TLHIEAYNETFSNR Unmodified 1693.806 0.80599822 3609 Q92503 SEC14L1 SEC14-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.067 61.169 3 0.0010546 70158 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 56.29 50.395 118220000 0 0 0 1949800 3433100 11457000 5601500 13038000 7908800 7326200 10796000 17867000 12058000 10903000 15885000 52176 3609 46850 438027;438028;438029;438030;438031;438032;438033;438034;438035;438036;438037;438038 346228;346229;346230;346231;346232;346233;346234;346235;346236;346237;346238 346236 8 TLHPAVHAGILAR Unmodified 1354.7834 0.78335271 1307 P31939 ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 44.528 45.077 3 0.0004364 48924 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.082 67.24 57858000 0 0 0 0 0 0 0 0 0 0 11818000 11450000 0 4874100 29715000 52177 1307 46851 438039;438040;438041;438042 346239;346240;346241 346239 3 TLHPDLGTDK Unmodified 1095.556 0.55603811 719 P00338 LDHA L-lactate dehydrogenase A chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.52 3.99 2 6 2 13 5 3 2 1 1 1 1 1 1 1 1 1 1 1 2 35.928 35.145 2 1.8297E-11 36154 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 178.94 139.29 8118000000 1689000000 3222300000 2101900000 22914000 14081000 18986000 14671000 12302000 12824000 18536000 186750000 184710000 19381000 144740000 454880000 52178 719 46852 438043;438044;438045;438046;438047;438048;438049;438050;438051;438052;438053;438054;438055;438056;438057;438058;438059;438060;438061;438062;438063;438064;438065 346242;346243;346244;346245;346246;346247;346248;346249;346250;346251;346252;346253;346254;346255;346256;346257;346258;346259;346260;346261;346262;346263;346264;346265;346266;346267;346268;346269;346270;346271;346272;346273;346274;346275;346276;346277;346278;346279;346280 346248 38 TLHQIFEK Unmodified 1014.5498 0.54983053 1695 P52732 KIF11 Kinesin-like protein KIF11 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 2 1 2 36.524 36.225 2 0.0071584 39474 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 90.601 48.314 60632000 12104000 0 0 0 0 5175400 3282600 3304600 2401600 3872300 5013400 0 7301700 2672900 15504000 52179 1695 46853 438066;438067;438068;438069;438070;438071;438072;438073;438074;438075;438076;438077 346281;346282;346283;346284;346285 346282 5 TLHQYTGSALK Unmodified 1217.6404 0.64043645 3247 Q8IWV8 UBR2 E3 ubiquitin-protein ligase UBR2 yes yes 0 0 0 By MS/MS 2 0 1 1 32.059 28.824 3 0.024671 36266 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 29.926 19.271 22347000 0 0 22347000 0 0 0 0 0 0 0 0 0 0 0 0 52180 3247 46854 438078 346286 346286 1 TLHSDDEGTVLDDSR Unmodified 1658.7384 0.73837217 123 O00170 AIP AH receptor-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 2 1 1 2 34.116 34.32 2;3 0.00015473 37787 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 51.771 41.136 131190000 0 0 0 6316400 6655000 15381000 7255500 6338400 7440900 13290000 20731000 0 8332900 11625000 27827000 52181 123 46855 438079;438080;438081;438082;438083;438084;438085;438086;438087;438088;438089;438090;438091 346287;346288;346289;346290;346291;346292;346293;346294;346295;346296;346297;346298;346299;346300;346301;346302 346297 15 TLHSDDEGTVLDDSRAR Unmodified 1885.8766 0.87659699 123 O00170 AIP AH receptor-interacting protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 15 2 2 2 1 2 2 1 1 2 32.641 32.925 3;4 0.016015 36017 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 30.107 20.05 117610000 0 0 0 0 0 18418000 10882000 14210000 3504400 16340000 12042000 9491000 0 5503700 27218000 52182 123 46856 438092;438093;438094;438095;438096;438097;438098;438099;438100;438101;438102;438103;438104;438105;438106 346303;346304 346303 2 TLHYECIVLVK Unmodified 1373.7377 0.73770765 4970 Q9UKK9 NUDT5 ADP-sugar pyrophosphatase yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 70.944 71.044 3 0.0056591 80717 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 39.785 28.252 58259000 0 0 0 2318300 0 1307500 0 0 0 0 7057700 10199000 0 8222000 29155000 52183 4970 46857 438107;438108;438109;438110;438111;438112 346305;346306;346307;346308 346307 4 TLIDDDNPPVSFVK Unmodified 1558.7879 0.78788854 1865 P61964 WDR5 WD repeat-containing protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 79.577 78.454 2 1.0228E-05 90935 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 102.4 89.277 1432800000 29430000 671390000 11896000 34085000 45949000 60529000 44639000 49307000 39725000 65114000 72895000 90508000 47367000 71051000 98883000 52184 1865 46858 438113;438114;438115;438116;438117;438118;438119;438120;438121;438122;438123;438124;438125;438126;438127;438128 346309;346310;346311;346312;346313;346314;346315;346316;346317;346318;346319;346320;346321;346322;346323;346324;346325;346326 346310 18 TLIDPENMLATTNK Unmodified 1559.7865 0.78650834 2748 Q5MIZ7 SMEK2 Serine/threonine-protein phosphatase 4 regulatory subunit 3B yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 80.272 80.351 2 0.0015527 92084 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 71.555 64.866 28878000 0 0 0 1341100 0 0 1628700 2604500 0 0 4949300 0 2776000 5500000 10078000 52185 2748 46859 438129;438130;438131;438132;438133;438134;438135;438136 346327;346328;346329;346330;346331;346332 346331 5 TLIEAGLPQK Unmodified 1068.6179 0.61791009 322 O43390 HNRNPR Heterogeneous nuclear ribonucleoprotein R yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56.888 55.792 2 0.003971 71589 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.853 80.485 969970000 30561000 735700000 14131000 14033000 9721600 13204000 13261000 11359000 9189200 15906000 12721000 28377000 17560000 14956000 29284000 52186 322 46860 438137;438138;438139;438140;438141;438142;438143;438144;438145;438146;438147;438148;438149;438150;438151 346333;346334;346335;346336;346337;346338;346339;346340;346341;346342;346343 346334 6 TLIEDEIATILK Unmodified 1357.7704 0.77044757 2250 Q13188 STK3 Serine/threonine-protein kinase 3;Serine/threonine-protein kinase 3 36kDa subunit;Serine/threonine-protein kinase 3 20kDa subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.12 3.79 4 1 3 1 3 1 1 1 1 97.511 94.651 2 4.6241E-22 116728 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 161.17 142.08 207550000 11911000 186930000 4786500 0 0 0 0 0 0 1570400 801170 0 0 0 1557500 52187 2250 46861 438152;438153;438154;438155;438156;438157;438158;438159 346344;346345;346346;346347;346348;346349;346350 346345 7 TLIEELK Unmodified 844.49058 0.49058431 1034;1080 P16220;P18846 CREB1;ATF1 Cyclic AMP-responsive element-binding protein 1;Cyclic AMP-dependent transcription factor ATF-1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56.335 55.244 2 0.021005 61491 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 107.43 7.3631 980080000 22665000 492980000 23407000 23040000 24638000 27978000 26705000 22062000 28460000 36059000 52341000 45818000 39978000 43199000 70751000 52188 1034;1080 46862 438160;438161;438162;438163;438164;438165;438166;438167;438168;438169;438170;438171;438172;438173;438174 346351;346352;346353;346354;346355;346356;346357;346358;346359;346360;346361;346362;346363;346364;346365;346366 346365 16 TLIENGEK Unmodified 902.47091 0.4709115 1387 P37198 NUP62 Nuclear pore glycoprotein p62 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 17.859 18.049 2 0.0048728 17680 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 109.01 24.445 405710000 0 0 0 21339000 26286000 25460000 30296000 0 24905000 32124000 36099000 63334000 45465000 35547000 64853000 52189 1387 46863 438175;438176;438177;438178;438179;438180;438181;438182;438183;438184;438185 346367;346368;346369;346370;346371;346372;346373;346374 346370 6 TLIEPFTLLASK Unmodified 1331.7701 0.77005364 4749 Q9NYS0 NKIRAS1 NF-kappa-B inhibitor-interacting Ras-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 97.682 92.908 2 9.4253E-09 115478 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 126.71 106.57 30004000 0 30004000 0 0 0 0 0 0 0 0 0 0 0 0 0 52190 4749 46864 438186;438187 346375;346376 346376 2 TLIFESECTPQSQFSIHASSNVNK Unmodified 2723.2861 0.2860942 3072 Q7Z2T5 TRMT1L TRMT1-like protein yes yes 0 0 0 By MS/MS 2 0 1 1 82.736 74.606 3 1.4738E-82 97616 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 145.58 138.62 26775000 26775000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52191 3072 46865 438188 346377 346377 1 TLIGFLR Unmodified 818.50142 0.50142377 254 O15116 LSM1 U6 snRNA-associated Sm-like protein LSm1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 78.595 78.695 2 0.019213 90329 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.54 25.229 50902000 0 0 0 0 2807700 0 0 4509300 0 6360700 5615300 8026700 3885100 6761000 12936000 52192 254 46866 438189;438190;438191;438192;438193;438194;438195;438196 346378;346379;346380 346378 3 TLIGYSAAELNR Unmodified 1306.6881 0.68811492 2128 Q06546 GABPA GA-binding protein alpha chain yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 66.419 66.329 2 0.003422 76461 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 60.434 41.163 43723000 0 0 0 3664800 3355600 6101700 5937600 8390900 0 9783800 0 0 6488600 0 0 52193 2128 46867 438197;438198;438199;438200;438201;438202;438203 346381;346382;346383;346384;346385;346386;346387 346387 7 TLIINLPGSK Unmodified 1054.6386 0.63864553 4579 Q9NQX3 GPHN Gephyrin;Molybdopterin adenylyltransferase;Molybdopterin molybdenumtransferase yes yes 0 0 0 By MS/MS 2 0 1 1 82.449 74.318 2 0.037524 97237 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.013 21.841 10084000 10084000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52194 4579 46868 438204 346388 346388 1 TLILDALK Unmodified 885.55352 0.55351892 2409 Q14469 HES1 Transcription factor HES-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 77.914 77.92 2 0.035078 90057 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 52.716 19.32 40155000 0 0 0 4948400 2165100 4393700 3324700 4204100 4101700 7027600 0 0 5289100 4700900 0 52195 2409 46869 438205;438206;438207;438208;438209;438210;438211;438212;438213 346389 346389 1 TLILEGLEK Unmodified 1014.5961 0.59611202 16 A3KMH1 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 74.138 73.674 2 0.02892 85071 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 48.794 29.091 6708300 0 0 0 3102500 3605700 0 0 0 0 0 0 0 0 0 0 52196 16 46870 438214;438215 346390 346390 1 TLINAEDPPMVVVR Oxidation (M) 1568.8232 0.82322819 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 72.617 72.635 2 0.00035198 83367 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 67.726 54.77 354100000 0 0 0 33456000 41774000 49975000 39544000 18813000 31410000 41847000 0 39136000 32268000 25880000 0 52197 1518 46871 438216;438217;438218;438219;438220;438221;438222;438223;438224;438225 346391;346392;346393;346394;346395;346396;346397;346398;346399;346400;346401 346399 2411 10 TLINAEDPPMVVVR Unmodified 1552.8283 0.82831357 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.397 79.457 2 1.5934E-12 91900 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 131.83 112.58 338240000 0 0 0 18140000 23275000 32716000 16684000 20459000 14729000 36168000 34627000 31083000 21901000 29072000 59386000 52198 1518 46871 438226;438227;438228;438229;438230;438231;438232;438233;438234;438235;438236;438237 346402;346403;346404;346405;346406;346407;346408;346409;346410;346411;346412;346413;346414;346415;346416 346411 15 TLINAEDPPMVVVRK Oxidation (M) 1696.9182 0.91819121 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 1 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.13 2.49 5 41 3 2 2 4 4 4 4 2 3 3 4 3 4 4 62.436 62.025 2;3 1.0994E-18 70826 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 117.09 83.682 2170900000 443790000 0 97973000 16830000 173270000 241540000 185880000 128910000 18750000 140210000 117230000 208140000 72957000 125430000 199960000 52199 1518 46872 438238;438239;438240;438241;438242;438243;438244;438245;438246;438247;438248;438249;438250;438251;438252;438253;438254;438255;438256;438257;438258;438259;438260;438261;438262;438263;438264;438265;438266;438267;438268;438269;438270;438271;438272;438273;438274;438275;438276;438277;438278;438279;438280;438281;438282;438283 346417;346418;346419;346420;346421;346422;346423;346424;346425;346426;346427;346428;346429;346430;346431;346432;346433;346434;346435;346436;346437;346438;346439 346423 2411 19 TLINAEDPPMVVVRK Unmodified 1680.9233 0.92327659 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 4 2 24 3 2 1 2 2 2 2 2 2 2 2 2 2 2 2 72.498 71.466 2;3 2.5846E-06 81843 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 61.444 54.863 2170000000 1131700000 86124000 42939000 41294000 40623000 104020000 45657000 63938000 51566000 96453000 94915000 81866000 45536000 69793000 173650000 52200 1518 46872 438284;438285;438286;438287;438288;438289;438290;438291;438292;438293;438294;438295;438296;438297;438298;438299;438300;438301;438302;438303;438304;438305;438306;438307;438308;438309;438310;438311;438312;438313 346440;346441;346442;346443;346444;346445;346446;346447;346448;346449;346450;346451;346452;346453;346454;346455;346456;346457;346458;346459;346460;346461;346462;346463;346464;346465;346466;346467 346455 25 TLINELVK Unmodified 928.55933 0.55933258 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 70.559 70.62 2 0.028474 80893 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 56.721 7.2795 114050000 0 0 0 0 20536000 0 20052000 27046000 18616000 0 27798000 0 0 0 0 52201 2392 46873 438314;438315;438316;438317;438318 346468;346469;346470;346471;346472 346470 4 TLIPHTDGEK Unmodified 1109.5717 0.57168818 2061 Q01664 TFAP4 Transcription factor AP-4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 27.666 27.941 2 0.010197 28715 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 56.432 33.651 44890000 0 0 0 0 7161400 0 0 0 0 0 10084000 0 0 10930000 16715000 52202 2061 46874 438319;438320;438321;438322;438323;438324 346473;346474;346475;346476;346477 346476 5 TLIQNCGASTIR Unmodified 1332.682 0.68198369 1570 P49368 CCT3 T-complex protein 1 subunit gamma yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.337 43.512 2 1.8259E-05 48451 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 105.4 86.126 397820000 0 0 0 16812000 14611000 25867000 18841000 23039000 19074000 24255000 46474000 75941000 40060000 29289000 63557000 52203 1570 46875 438325;438326;438327;438328;438329;438330;438331;438332;438333;438334;438335;438336 346478;346479;346480;346481;346482;346483;346484;346485;346486;346487;346488;346489 346479 12 TLISASSDTTVK Unmodified 1221.6452 0.64524705 3470 Q8TAF3 WDR48 WD repeat-containing protein 48 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.64 2.9 1 1 9 2 1 1 1 1 1 1 1 1 1 40.591 39.82 2 9.7E-05 50603 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.52 61.075 109730000 0 72613000 0 2587100 0 0 3510800 0 0 5548400 5242600 4900500 3931100 4668100 6725700 52204 3470 46876 438337;438338;438339;438340;438341;438342;438343;438344;438345;438346;438347 346490;346491;346492;346493;346494;346495 346493 5 TLISEPCGIK Unmodified 1116.5849 0.5848954 423 O60678 PRMT3 Protein arginine N-methyltransferase 3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 52.386 52.553 2 0.022013 59372 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 46.334 25.814 57958000 0 0 0 4371900 0 0 3686000 0 0 4732200 6112300 27576000 5825500 5654100 0 52205 423 46877 438348;438349;438350;438351;438352;438353;438354 346496;346497;346498;346499 346499 4 TLISLPPQEATNSSK Unmodified 1584.8359 0.83590137 2323 Q13596 SNX1 Sorting nexin-1 yes yes 0 0 0 By MS/MS 2 0 1 1 72.436 66.709 2 0.008136 84713 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.93 39.726 12525000 0 12525000 0 0 0 0 0 0 0 0 0 0 0 0 0 52206 2323 46878 438355 346500 346500 1 TLITFVNK Unmodified 934.54877 0.54876789 4665 Q9NVD7 PARVA Alpha-parvin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 66.066 64.526 2 0.02179 79775 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 84.244 26.78 675460000 247000000 80352000 39015000 13007000 14061000 40721000 23145000 20460000 15334000 28154000 34202000 33456000 24555000 22281000 39711000 52207 4665 46879 438356;438357;438358;438359;438360;438361;438362;438363;438364;438365;438366;438367;438368;438369;438370;438371;438372 346501;346502;346503;346504 346502 1 TLIYQMAPAVSK Unmodified 1320.7112 0.71115855 1181 P25054 APC Adenomatous polyposis coli protein yes yes 0 0 0 By MS/MS 2 0 1 1 77.861 69.731 2 0.013118 91824 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.434 47.314 10211000 10211000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52208 1181 46880 438373 346505 346505 1 TLKPEGNILR Unmodified 1139.6663 0.66625727 4776 Q9NZM5 GLTSCR2 Glioma tumor suppressor candidate region gene 2 protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.905 40.084 3 0.0017293 43671 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 67.704 57.816 151600000 0 0 0 10029000 8301800 11290000 8158900 6669600 6280100 10783000 18173000 23170000 17080000 11630000 20032000 52209 4776 46881 438374;438375;438376;438377;438378;438379;438380;438381;438382;438383;438384;438385 346506;346507;346508;346509;346510;346511;346512;346513;346514;346515 346514 10 TLLADQGEIR Unmodified 1114.5982 0.59823728 583 O94776 MTA2 Metastasis-associated protein MTA2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 48.498 48.591 2 0.0017421 53539 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.948 64.793 534190000 0 0 0 53413000 58132000 0 55310000 52644000 51741000 0 75967000 0 75217000 0 111770000 52210 583 46882 438386;438387;438388;438389;438390;438391;438392;438393 346516;346517;346518;346519;346520;346521;346522;346523 346517 4 TLLADQGEIRVGCK Unmodified 1558.8137 0.81372614 583 O94776 MTA2 Metastasis-associated protein MTA2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 5 2 1 2 63.035 56.477 2;3 1.3544E-29 76007 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 119.25 109.47 156270000 107700000 40841000 7737500 0 0 0 0 0 0 0 0 0 0 0 0 52211 583 46883 438394;438395;438396;438397;438398 346524;346525;346526;346527;346528;346529;346530;346531 346526 7 TLLAILR Unmodified 798.53272 0.5327239 1334 P33993 MCM7 DNA replication licensing factor MCM7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 79.277 79.354 2 0.015385 91117 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 118.06 11.77 52819000 0 0 0 3254200 0 0 5375300 0 0 0 8247700 7817500 0 8559800 19565000 52212 1334 46884 438399;438400;438401;438402;438403;438404 346532;346533;346534 346532 3 TLLALGSVK Unmodified 900.56442 0.56441796 2842 Q659A1 ICE2 Little elongation complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 74.474 68.867 2 0.033862 90323 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.42 31.81 13476000 10952000 0 2523700 0 0 0 0 0 0 0 0 0 0 0 0 52213 2842 46885 438405;438406 346535 346535 1 TLLAQTLAK Unmodified 957.58588 0.58588168 573 O76031 CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 64.321 57.23 2 0.045946 76843 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.542 36.859 65243000 34467000 30776000 0 0 0 0 0 0 0 0 0 0 0 0 0 52214 573 46886 438407;438408 346536 346536 0 TLLASACK Unmodified 862.45824 0.45823833 2882 Q6IA86 ELP2 Elongator complex protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 32.185 26.341 2 0.018072 36891 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.296 59.958 70388000 70388000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52215 2882 46887 438409 346537 346537 1 TLLDIDNTR Unmodified 1059.556 0.55603811 1354 P35527;CON__P35527 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 3 24 1 1 1 3 2 2 1 4 2 3 1 2 1 2 1 59.41 59.483 2 3.0535E-39 67105 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 190.51 125.26 + 86170000000 4903900 2597700 1399400 8974700000 6164700000 5382800000 3328600000 19196000000 4332800000 7772200000 6731000000 8848200000 8301000000 3747300000 3381800000 52216 1354 46888 438410;438411;438412;438413;438414;438415;438416;438417;438418;438419;438420;438421;438422;438423;438424;438425;438426;438427;438428;438429;438430;438431;438432;438433;438434;438435;438436 346538;346539;346540;346541;346542;346543;346544;346545;346546;346547;346548;346549;346550;346551;346552;346553;346554;346555;346556;346557;346558;346559;346560;346561;346562;346563;346564;346565;346566;346567;346568;346569;346570;346571;346572;346573;346574;346575;346576;346577;346578;346579;346580;346581;346582;346583;346584;346585;346586;346587;346588;346589;346590;346591;346592;346593;346594;346595;346596;346597;346598;346599;346600;346601;346602;346603;346604;346605;346606;346607;346608;346609;346610;346611;346612;346613;346614 346606 77 TLLDTEDK Unmodified 933.46549 0.46549177 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.2 3.92 3 2 1 1 1 1 1 31.054 28.458 2 0.011275 36303 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.86 50.881 199890000 4900400 161820000 1930200 0 0 0 0 0 0 0 0 19379000 0 11856000 0 52217 1286 46889 438437;438438;438439;438440;438441 346615;346616;346617 346616 3 TLLEAENSR Unmodified 1031.5247 0.52473799 1549 P48681 NES Nestin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 2 2 2 1 2 1 2 1 1 1 1 27.504 27.639 2 0.019227 28759 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 54.157 26.632 74865000 0 0 0 12079000 7068200 7315100 12825000 0 6055000 4648200 4009800 4697600 5495600 2112000 8559700 52218 1549 46890 438442;438443;438444;438445;438446;438447;438448;438449;438450;438451;438452;438453;438454;438455;438456;438457;438458 346618;346619;346620;346621;346622;346623;346624;346625;346626 346618 9 TLLEALEQR Unmodified 1071.5924 0.59242362 2921 Q6P1N0 CC2D1A Coiled-coil and C2 domain-containing protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 74.215 74.381 2 0.0052023 85738 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 80.438 63.662 77825000 0 0 0 0 0 4910200 4911200 6516100 6646200 9825900 9852100 8812100 6092000 5272200 14987000 52219 2921 46891 438459;438460;438461;438462;438463;438464;438465;438466;438467;438468 346627;346628;346629;346630;346631;346632;346633;346634;346635;346636 346633 10 TLLEEEYFR Unmodified 1198.587 0.58700389 1694 P52701 MSH6 DNA mismatch repair protein Msh6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 73.503 73.553 2 0.00355 84690 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 89.698 69.911 177450000 0 0 0 12490000 12414000 24739000 0 11990000 0 19681000 13502000 24445000 15042000 14748000 28402000 52220 1694 46892 438469;438470;438471;438472;438473;438474;438475;438476;438477;438478;438479 346637;346638;346639;346640;346641;346642;346643;346644;346645;346646 346638 10 TLLEEEYFREK Unmodified 1455.7246 0.72456001 1694 P52701 MSH6 DNA mismatch repair protein Msh6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 2 1 1 1 1 2 1 1 2 1 1 2 63.767 63.866 2;3 8.5915E-08 72175 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 147.91 139.5 245950000 0 0 0 12272000 6892100 29522000 12197000 17643000 17842000 22869000 18199000 25529000 18098000 14806000 50080000 52221 1694 46893 438480;438481;438482;438483;438484;438485;438486;438487;438488;438489;438490;438491;438492;438493;438494;438495 346647;346648;346649;346650;346651;346652;346653;346654;346655;346656;346657;346658;346659;346660;346661 346651 14 TLLEFLK Unmodified 862.51641 0.51640513 2395 Q14232 EIF2B1 Translation initiation factor eIF-2B subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 82.756 82.902 2 0.035265 95954 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 70.912 19.947 59268000 0 0 0 0 0 10371000 2531500 2235600 2527400 6111500 2869500 0 0 7723100 24898000 52222 2395 46894 438496;438497;438498;438499;438500;438501;438502;438503 346662;346663 346662 2 TLLEGEESR Unmodified 1032.5088 0.50875357 780;50 CON__ENSEMBL:ENSBTAP00000038253;P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.96 2.69 3 20 1 1 1 2 2 2 1 1 2 3 2 2 1 1 1 30.008 30.154 2 2.0454E-09 32147 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 163.99 125.19 + 111370000000 2650300 1405400 965790 15739000000 8602100000 6850900000 6896400000 17323000000 5323500000 11303000000 8232000000 12380000000 9600600000 5034400000 4076700000 52223 50;780 46895 438504;438505;438506;438507;438508;438509;438510;438511;438512;438513;438514;438515;438516;438517;438518;438519;438520;438521;438522;438523;438524;438525;438526 346664;346665;346666;346667;346668;346669;346670;346671;346672;346673;346674;346675;346676;346677;346678;346679;346680;346681;346682;346683;346684;346685;346686;346687;346688;346689;346690;346691;346692;346693;346694;346695;346696;346697;346698;346699;346700;346701;346702;346703;346704;346705;346706;346707;346708;346709;346710;346711;346712;346713;346714;346715;346716;346717;346718;346719;346720;346721;346722;346723;346724;346725;346726;346727;346728;346729;346730;346731;346732;346733;346734;346735;346736 346701 72 TLLELLDMK Oxidation (M) 1090.5944 0.59439746 4710 Q9NWZ5 UCKL1 Uridine-cytidine kinase-like 1 yes yes 0 1 0 By MS/MS 2 0 1 1 91.084 82.954 2 0.024422 107429 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.224 53.442 5733300 5733300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52224 4710 46896 438527 346737 346737 1 TLLENTAITIGR Unmodified 1300.7351 0.73506511 3692 Q92973 TNPO1 Transportin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.936 75 2 2.8316E-06 86387 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 112.36 58.389 295610000 0 0 0 6068900 13882000 38610000 14196000 14659000 22705000 43331000 27914000 24645000 18731000 26272000 44600000 52225 3692 46897 438528;438529;438530;438531;438532;438533;438534;438535;438536;438537;438538;438539 346738;346739;346740;346741;346742;346743;346744;346745;346746;346747;346748;346749;346750 346739 13 TLLEQLDDDQ Unmodified 1188.551 0.55101232 494 O75400 PRPF40A Pre-mRNA-processing factor 40 homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.849 72.912 2 0.0078115 83792 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 75.738 69.435 707040000 0 0 0 44674000 55548000 50137000 50707000 42427000 51410000 67635000 68157000 70194000 58136000 48589000 99427000 52226 494 46898 438540;438541;438542;438543;438544;438545;438546;438547;438548;438549;438550;438551 346751;346752;346753;346754;346755;346756;346757;346758;346759;346760;346761;346762 346756 9 TLLETLQK Unmodified 944.55425 0.5542472 4901 Q9UHG3 PCYOX1 Prenylcysteine oxidase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 55.42 55.548 2 0.016961 63308 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 66.429 14.13 135730000 0 0 0 15682000 9506500 9801800 9476200 12269000 0 11566000 13615000 18055000 11104000 10191000 14461000 52227 4901 46899 438552;438553;438554;438555;438556;438557;438558;438559;438560;438561;438562 346763;346764;346765;346766;346767;346768;346769 346766 6 TLLGDGPVVTDPK Unmodified 1310.7082 0.70818166 1690 P52566 ARHGDIB Rho GDP-dissociation inhibitor 2 yes yes 0 0 0 By MS/MS 10 0 1 1 63.48 63.642 2 0.0021694 73060 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 72.006 52.735 5634100 0 0 0 0 0 0 0 0 0 0 0 0 5634100 0 0 52228 1690 46900 438563 346770 346770 1 TLLHLGSSAPGK Unmodified 1179.6612 0.66117189 2759 Q5SW79 CEP170 Centrosomal protein of 170 kDa yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46.607 45.888 3 0.013535 49454 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.066 27.45 205580000 34364000 0 2125700 9812100 9500200 13538000 15633000 10776000 10198000 16071000 17483000 16045000 17992000 15694000 16350000 52229 2759 46901 438564;438565;438566;438567;438568;438569;438570;438571;438572;438573;438574;438575;438576;438577 346771;346772;346773;346774;346775;346776;346777;346778 346772 6 TLLLCGYPNVGK Unmodified 1333.7064 0.70640752 4263 Q9BZE4 GTPBP4 Nucleolar GTP-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 75.228 75.419 2 0.0016347 86127 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 78.934 59.1 16906000 0 0 0 0 0 0 0 0 0 3160300 3197700 0 0 4843100 5704500 52230 4263 46902 438578;438579;438580;438581;438582 346779;346780;346781;346782;346783 346782 5 TLLLCSPQPDGK Unmodified 1327.6806 0.6805867 4133 Q9BSV6 TSEN34 tRNA-splicing endonuclease subunit Sen34 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 58.852 58.503 2 0.0015046 66430 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 67.334 49.425 159760000 0 86845000 0 2317400 4332300 5721800 4336700 4336500 4678200 8115400 8175500 6356400 5917300 7542600 11081000 52231 4133 46903 438583;438584;438585;438586;438587;438588;438589;438590;438591;438592;438593;438594;438595 346784;346785;346786;346787;346788;346789;346790;346791;346792;346793;346794;346795;346796;346797 346790 14 TLLLDGNPFR Unmodified 1144.6241 0.6240581 4468 Q9H9A6 LRRC40 Leucine-rich repeat-containing protein 40 yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.096 82.157 2 0.0051532 94984 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 71.379 61.985 94638000 0 0 0 3705600 4147200 10246000 5279600 7188100 4816500 10582000 9014000 10837000 6813300 7061300 14948000 52232 4468 46904 438596;438597;438598;438599;438600;438601;438602;438603;438604;438605;438606;438607 346798;346799;346800;346801;346802 346801 4 TLLLDGNPFRVPR Unmodified 1496.8463 0.8463469 4468 Q9H9A6 LRRC40 Leucine-rich repeat-containing protein 40 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 82.174 82.262 3 0.0023222 95129 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 43.382 29.419 57587000 0 0 0 1068000 0 7248600 1082000 3285100 4140600 4497200 3003500 6270600 2729400 0 24262000 52233 4468 46905 438608;438609;438610;438611;438612;438613;438614;438615;438616;438617 346803;346804;346805;346806;346807;346808 346804 6 TLLLLQDTER Unmodified 1200.6714 0.67140222 3189 Q86X53 ERICH1 Glutamate-rich protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 75.123 75.196 2 0.011715 86706 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 53.751 22.677 42627000 0 0 0 2236400 0 3208300 3389200 0 3911600 5431800 0 8039500 3935500 3211500 9263100 52234 3189 46906 438618;438619;438620;438621;438622;438623;438624;438625;438626 346809;346810;346811;346812;346813;346814 346814 6 TLLLLQDTERLK Unmodified 1441.8504 0.85042922 3189 Q86X53 ERICH1 Glutamate-rich protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 85.336 77.206 3 0.026331 100850 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.083 31.853 3655100 3655100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52235 3189 46907 438627 346815 346815 1 TLLLLSSVPK Unmodified 1069.6747 0.67469669 775 P04150 NR3C1 Glucocorticoid receptor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 83.436 82.317 2 0.0068811 94179 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 63.816 43.334 486120000 72662000 25902000 15452000 7712400 14639000 27023000 20219000 36760000 18643000 43433000 37526000 43031000 26932000 36658000 59529000 52236 775 46908 438628;438629;438630;438631;438632;438633;438634;438635;438636;438637;438638;438639;438640;438641;438642;438643 346816;346817;346818;346819;346820;346821;346822;346823;346824;346825;346826;346827;346828;346829;346830 346826 15 TLLMDALK Unmodified 903.50994 0.50993955 3178 Q86W50 METTL16 Methyltransferase-like protein 16 yes yes 0 0 0 By MS/MS 2 0 1 1 80.112 75.399 2 0.033827 93807 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.26 41.971 76107000 0 76107000 0 0 0 0 0 0 0 0 0 0 0 0 0 52237 3178 46909 438644 346831 346831 1 TLLMDALK Oxidation (M) 919.50485 0.50485417 3178 Q86W50 METTL16 Methyltransferase-like protein 16 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 4 1 1 2 67.956 62.541 2 0.044436 76853 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 66.073 37.966 57336000 17649000 14189000 25499000 0 0 0 0 0 0 0 0 0 0 0 0 52238 3178 46909 438645;438646;438647;438648 346832;346833 346832 2 TLLMENAER Unmodified 1075.5332 0.53319418 4672 Q9NVM9 ASUN Protein asunder homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 42.933 43.019 2 0.0099526 48276 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 65.246 42.755 32104000 0 0 0 3705100 4009300 0 4888200 4518800 2682400 3562500 7308800 0 0 0 1428500 52239 4672 46910 438649;438650;438651;438652;438653;438654;438655;438656 346834;346835;346836;346837 346835 4 TLLNAQPPVGAAYQDSPGEQK Unmodified 2183.0859 0.08586148 3992 Q96SN8 CDK5RAP2 CDK5 regulatory subunit-associated protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 74.362 69.207 3 9.874E-07 86884 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.401 56.509 38770000 0 38770000 0 0 0 0 0 0 0 0 0 0 0 0 0 52240 3992 46911 438657 346838 346838 1 TLLNSQLEMERMK Unmodified 1591.8062 0.80619792 1996 P82094 TMF1 TATA element modulatory factor yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 49.292 49.254 3 0.040649 54725 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 21.06 1.8159 60465000 0 0 0 4964500 11318000 0 10437000 7675000 0 0 0 26071000 0 0 0 52241 1996 46912 438658;438659;438660;438661;438662 346839 346839 1 TLLPHDPTADVFVTPAEEK Unmodified 2079.0524 0.052436086 3504 Q8TDN6 BRIX1 Ribosome biogenesis protein BRX1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 79.042 78.886 3 8.1971E-06 91114 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.779 64.201 141610000 0 0 5764700 0 0 12951000 0 0 12179000 17064000 17302000 18176000 15299000 10644000 32234000 52242 3504 46913 438663;438664;438665;438666;438667;438668;438669;438670;438671;438672 346840;346841;346842;346843;346844;346845;346846;346847;346848;346849;346850;346851;346852;346853;346854 346841 15 TLLQENNLQNAK Unmodified 1384.731 0.73104237 3452 Q8NG08 HELB DNA helicase B yes yes 0 0 0 By MS/MS 2 0 1 1 50.835 45.089 2 0.0016329 58517 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.74 96.714 17576000 0 17576000 0 0 0 0 0 0 0 0 0 0 0 0 0 52243 3452 46914 438673 346855 346855 1 TLLQPFHATGAESDK Unmodified 1613.8049 0.80493559 2880 Q6GYQ0 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 yes yes 0 0 0 By MS/MS 2 0 1 1 68.265 59.97 3 0.00029236 80258 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.631 56.341 25985000 25985000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52244 2880 46915 438674 346856 346856 0 TLLQQNQQLK Unmodified 1212.6826 0.68263561 2155 Q08378 GOLGA3 Golgin subfamily A member 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39.647 38.929 2 9.6664E-06 52461 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 139.68 35.94 211740000 64117000 44326000 0 5196400 4920600 6565500 8019600 5240700 5220700 10133000 11036000 11139000 8901800 8134500 18787000 52245 2155 46916 438675;438676;438677;438678;438679;438680;438681;438682;438683;438684;438685;438686;438687;438688 346857;346858;346859;346860;346861;346862;346863;346864;346865;346866;346867;346868;346869;346870;346871;346872;346873 346865 17 TLLSDPTYR Unmodified 1064.5502 0.55022446 1313 P31948 STIP1 Stress-induced-phosphoprotein 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 48.527 49.003 2 0.049332 54405 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 42.287 23.505 146740000 0 0 0 0 0 0 0 0 0 0 0 0 0 36382000 110360000 52246 1313 46917 438689;438690 346874 346874 1 TLLSESSSQSSK Unmodified 1252.6147 0.61467521 5061 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 28.182 23.27 2 0.017564 31036 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.841 51.101 85172000 4365700 80807000 0 0 0 0 0 0 0 0 0 0 0 0 0 52247 5061 46918 438691;438692 346875;346876 346876 2 TLLSIPEVVR Unmodified 1125.6758 0.67575932 3964 Q96R06 SPAG5 Sperm-associated antigen 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.892 82.956 2 0.008766 96388 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 59.245 27.311 108620000 0 0 0 2366100 5620200 7955400 4095400 6824600 5154800 8719700 9240000 10970000 12123000 14256000 21294000 52248 3964 46919 438693;438694;438695;438696;438697;438698;438699;438700;438701;438702;438703;438704 346877;346878;346879;346880;346881;346882;346883;346884;346885 346884 9 TLLSNLEEAK Unmodified 1116.6027 0.60265396 931 P10909 CLU Clusterin;Clusterin beta chain;Clusterin alpha chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 68.723 67.711 2 0.00092144 77186 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 113.71 87.25 736740000 5904100 315950000 56388000 18421000 19520000 27172000 27602000 28934000 22453000 37100000 35432000 41567000 29454000 34498000 36341000 52249 931 46920 438705;438706;438707;438708;438709;438710;438711;438712;438713;438714;438715;438716;438717;438718;438719;438720 346886;346887;346888;346889;346890;346891;346892;346893;346894;346895;346896;346897;346898;346899;346900;346901;346902;346903 346888 17 TLLSVPGYK Unmodified 976.55933 0.55933258 1210 P26640 VARS Valine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.5 3.12 3 13 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 67.486 66.507 2 0.0095683 87752 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.953 27.748 485500000 66312000 79161000 4768300 12926000 13438000 36044000 19347000 17108000 11517000 36133000 33622000 34277000 20250000 31180000 69418000 52250 1210 46921 438721;438722;438723;438724;438725;438726;438727;438728;438729;438730;438731;438732;438733;438734;438735;438736 346904;346905;346906;346907;346908;346909;346910;346911;346912 346908 8 TLLTGDGGGEATGSPLAQGK Unmodified 1828.9167 0.91667089 2990 Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 59.847 59.88 2 2.5361E-05 69152 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 77.912 64.711 13740000 0 0 0 3240500 0 0 0 0 0 0 0 0 0 3144200 7354900 52251 2990 46922 438737;438738;438739;438740 346913;346914;346915 346915 3 TLLVADPR Unmodified 883.51272 0.51271674 1879 P62249 RPS16 40S ribosomal protein S16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 47.01 47.152 2 0.012232 53392 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 75.109 25.751 1027400000 0 0 0 86597000 74943000 92993000 65762000 74717000 51734000 113230000 130690000 173750000 0 0 162980000 52252 1879 46923 438741;438742;438743;438744;438745;438746;438747;438748;438749;438750 346916;346917;346918;346919;346920;346921 346916 6 TLLVADPRR Unmodified 1039.6138 0.61382777 1879 P62249 RPS16 40S ribosomal protein S16 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 39.244 39.493 2 0.038916 42817 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 84.498 66.512 58143000 0 0 0 0 4162400 3379700 3785600 0 3165000 4249800 6396200 9080100 6858600 6386500 10679000 52253 1879 46924 438751;438752;438753;438754;438755;438756;438757;438758;438759;438760 346922 346922 0 TLLVNNNR Unmodified 942.52468 0.52467841 892 P09661 SNRPA1 U2 small nuclear ribonucleoprotein A' yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 2 1 1 1 1 1 1 1 2 26.923 27.142 2 0.0074285 28538 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 89.673 54.568 446110000 0 0 0 20739000 24624000 29483000 31230000 24635000 18102000 38616000 53318000 56044000 41121000 46224000 61973000 52254 892 46925 438761;438762;438763;438764;438765;438766;438767;438768;438769;438770;438771;438772;438773;438774 346923;346924;346925;346926;346927;346928;346929;346930 346926 8 TLLVSTSAVDNNEAQK Unmodified 1688.8581 0.85809337 2786 Q5T8P6 RBM26 RNA-binding protein 26 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.56 3 2 1 13 1 2 1 1 1 1 1 1 1 1 1 1 2 1 54.872 53.721 2 1.9582E-148 67900 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 236.11 210.73 986110000 8179400 317340000 0 42896000 45497000 57586000 52054000 52077000 45613000 68027000 62290000 76215000 45509000 37141000 75679000 52255 2786 46926 438775;438776;438777;438778;438779;438780;438781;438782;438783;438784;438785;438786;438787;438788;438789;438790 346931;346932;346933;346934;346935;346936;346937;346938;346939;346940;346941;346942;346943;346944;346945;346946;346947;346948 346935 17 TLLVSTSAVDNNEAQKK Unmodified 1816.9531 0.95305639 2786 Q5T8P6 RBM26 RNA-binding protein 26 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.964 46.143 3 4.897E-07 51737 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 65.107 57.668 97064000 0 0 0 6064000 9270500 0 9822600 7581500 5235500 8479600 7409300 17324000 10999000 4660200 10217000 52256 2786 46927 438791;438792;438793;438794;438795;438796;438797;438798;438799;438800;438801;438802 346949;346950;346951;346952;346953;346954;346955;346956;346957 346953 9 TLLVYDMNLR Oxidation (M) 1252.6486 0.64855829 2881 Q6I9Y2 THOC7 THO complex subunit 7 homolog yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 69.351 69.628 2 0.006285 79953 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 57.59 41.928 24029000 0 0 0 0 0 0 3691800 0 0 5309000 5395600 5250300 0 0 4381900 52257 2881 46928 438803;438804;438805;438806;438807 346958;346959;346960;346961;346962 346958 4521 5 TLMAQSIYGGRVDNEFDQR Oxidation (M) 2215.0328 0.032780052 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 1 1 By MS/MS By matching By matching By MS/MS 10 0 4 1 1 1 1 64.426 64.515 3 9.9651E-05 73965 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 52.784 37.695 17770000 0 0 0 0 0 6982100 0 0 4383400 6405000 0 0 0 0 0 52258 2392 46929 438808;438809;438810;438811 346963;346964 346963 3920 2 TLMMFVTVSGSPTEK 2 Oxidation (M) 1658.7895 0.7895448 2440 Q14696 MESDC2 LDLR chaperone MESD yes yes 0 2 0 By MS/MS 2 0 1 1 73.281 65.085 2 0.0017313 86214 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.451 54.771 3243100 3243100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52259 2440 46930 438812 346965;346966 346965 4002;4003 2 TLMNAVSPLK Oxidation (M) 1088.59 0.58998078 2183 Q12768 KIAA0196 WASH complex subunit strumpellin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 2 2 50.556 45.261 2 0.0070356 61748 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.939 21.761 47297000 11559000 29432000 6306300 0 0 0 0 0 0 0 0 0 0 0 0 52260 2183 46931 438813;438814;438815;438816;438817 346967;346968;346969;346970;346971;346972 346971 3554 6 TLMNAVSPLK Unmodified 1072.5951 0.59506616 2183 Q12768 KIAA0196 WASH complex subunit strumpellin yes yes 0 0 0 By MS/MS 2 0 1 1 68.636 64.913 2 0.01929 80259 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 65.224 46.449 4699300 0 0 4699300 0 0 0 0 0 0 0 0 0 0 0 0 52261 2183 46931 438818 346973 346973 1 TLMNLGGLAVAR Oxidation (M) 1230.6754 0.67544174 1391 P37802 TAGLN2 Transgelin-2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 1 1 2 1 2 2 2 2 2 2 68.495 68.572 2 2.5536E-11 78879 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 149.72 136.68 600870000 0 0 0 28347000 24864000 27071000 26394000 24116000 12790000 44796000 82809000 88543000 37632000 61089000 142420000 52262 1391 46932 438819;438820;438821;438822;438823;438824;438825;438826;438827;438828;438829;438830;438831;438832;438833;438834;438835;438836;438837;438838;438839 346974;346975;346976;346977;346978;346979;346980;346981;346982;346983;346984;346985;346986;346987;346988;346989;346990;346991 346986 2157 15 TLMNLGGLAVAR Unmodified 1214.6805 0.68052712 1391 P37802 TAGLN2 Transgelin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.65 80.712 2 1.3106E-10 92964 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 145.72 114.35 376170000 0 0 0 7551700 8881700 20134000 15858000 17207000 11435000 26017000 31055000 35899000 10872000 29136000 162120000 52263 1391 46932 438840;438841;438842;438843;438844;438845;438846;438847;438848;438849;438850;438851 346992;346993;346994;346995;346996;346997;346998;346999;347000;347001;347002;347003 346995 12 TLMSSGQMAPSSSNK Unmodified 1524.6912 0.69122774 2828 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 6 1 1 1 1 1 1 35.201 35.602 2 0.00070322 38174 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 76.655 49.174 43837000 0 0 0 0 0 4087000 0 0 0 5632200 5831800 7614800 0 6028900 14642000 52264 2828 46933 438852;438853;438854;438855;438856;438857 347004;347005;347006;347007 347007 4 TLMSSGQMAPSSSNK 2 Oxidation (M) 1556.6811 0.68105699 2828 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog yes yes 0 2 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 12.473 12.739 2 0.00040475 11579 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.836 52.055 4478800 0 0 0 0 0 0 0 1045200 0 0 0 2290000 0 1143600 0 52265 2828 46933 438858;438859;438860 347008 347008 4472;4473 1 TLNAETPK Unmodified 872.46035 0.46034682 3047 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 2 1 1 1 1 15.601 15.801 2 0.0047764 15243 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 113.7 64.911 355970000 0 0 0 15754000 17925000 17263000 21596000 0 16195000 31842000 56087000 47597000 44573000 38823000 48318000 52266 3047 46934 438861;438862;438863;438864;438865;438866;438867;438868;438869;438870;438871;438872;438873 347009;347010;347011;347012;347013;347014;347015;347016;347017;347018;347019;347020;347021 347014 13 TLNAGAYSK Unmodified 923.47125 0.47124585 1639 P50897 PPT1 Palmitoyl-protein thioesterase 1 yes yes 0 0 0 By MS/MS 10 0 1 1 20.573 20.555 2 0.026691 21254 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 49.715 20.405 3744300 0 0 0 0 0 0 3744300 0 0 0 0 0 0 0 0 52267 1639 46935 438874 347022 347022 1 TLNDELEIIEGMK Oxidation (M) 1519.744 0.74397482 930 P10809 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.08 4 1 21 2 2 1 2 2 2 2 2 2 2 2 2 1 1 1 80.937 79.946 2;3 4.3235E-47 95393 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 197.73 173.64 1763800000 49702000 739680000 19988000 30082000 57785000 105730000 55686000 73142000 75441000 132290000 113800000 112880000 18431000 69511000 109650000 52268 930 46936 438875;438876;438877;438878;438879;438880;438881;438882;438883;438884;438885;438886;438887;438888;438889;438890;438891;438892;438893;438894;438895;438896;438897;438898;438899;438900 347023;347024;347025;347026;347027;347028;347029;347030;347031;347032;347033;347034;347035;347036;347037;347038;347039;347040;347041;347042;347043;347044;347045;347046 347031 1204 21 TLNDELEIIEGMK Unmodified 1503.7491 0.7490602 930 P10809 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.74 3.84 6 2 11 2 6 1 1 1 1 1 1 1 1 1 1 1 88.543 86.877 2 5.9249E-33 108578 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 203.03 169.81 261710000 109380000 54007000 0 0 2991800 4416400 3149800 5634100 4103200 15093000 10220000 5818200 3130700 7111100 36652000 52269 930 46936 438901;438902;438903;438904;438905;438906;438907;438908;438909;438910;438911;438912;438913;438914;438915;438916;438917;438918;438919 347047;347048;347049;347050;347051;347052;347053;347054;347055;347056;347057;347058;347059;347060;347061;347062;347063;347064;347065;347066;347067 347060 20 TLNDMRQEYEQLIAK Oxidation (M) 1866.9146 0.9145624 1354 P35527;CON__P35527 KRT9 Keratin, type I cytoskeletal 9 yes no 0 1 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.26 2.28 4 1 48 3 1 1 5 4 4 3 4 3 5 5 4 4 4 3 63.772 63.21 2;3 2.2581E-26 72010 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 136.93 120.4 + 64445000000 472460000 10533000 7481700 6370000000 3392500000 5434800000 1238500000 17493000000 1670600000 6030900000 5263700000 6447600000 6373700000 2716000000 1523200000 52270 1354 46937 438920;438921;438922;438923;438924;438925;438926;438927;438928;438929;438930;438931;438932;438933;438934;438935;438936;438937;438938;438939;438940;438941;438942;438943;438944;438945;438946;438947;438948;438949;438950;438951;438952;438953;438954;438955;438956;438957;438958;438959;438960;438961;438962;438963;438964;438965;438966;438967;438968;438969;438970;438971;438972 347068;347069;347070;347071;347072;347073;347074;347075;347076;347077;347078;347079;347080;347081;347082;347083;347084;347085;347086;347087;347088;347089;347090;347091;347092;347093;347094;347095;347096;347097;347098;347099;347100;347101;347102;347103;347104;347105;347106;347107;347108;347109;347110;347111;347112;347113;347114 347112 2064 44 TLNDMRQEYEQLIAK Unmodified 1850.9196 0.91964777 1354 P35527;CON__P35527 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.89 2.72 3 1 24 3 1 2 2 2 2 2 2 2 2 2 2 2 2 78.803 78.261 2;3 4.0995E-53 90391 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 181.98 147.23 + 4714900000 320380000 294260000 0 56892000 42501000 215290000 22630000 1346800000 224010000 522620000 246150000 352430000 167450000 160960000 742480000 52271 1354 46937 438973;438974;438975;438976;438977;438978;438979;438980;438981;438982;438983;438984;438985;438986;438987;438988;438989;438990;438991;438992;438993;438994;438995;438996;438997;438998;438999;439000 347115;347116;347117;347118;347119;347120;347121;347122;347123;347124;347125;347126;347127;347128;347129;347130;347131;347132;347133;347134;347135;347136;347137;347138 347128 14 TLNEADCATVPPAIRSY Unmodified 1876.8989 0.89891233 1293 P31040 SDHA Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes yes 0 0 1 By MS/MS 2 0 1 1 76.044 71.104 2 3.012E-51 88712 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 172.1 166.72 147130000 0 147130000 0 0 0 0 0 0 0 0 0 0 0 0 0 52272 1293 46938 439001 347139;347140 347139 2 TLNEWDSR Unmodified 1019.4672 0.46722311 278 O15371 EIF3D Eukaryotic translation initiation factor 3 subunit D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.531 34.714 2 0.041222 38618 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 50.04 40.129 114100000 0 0 0 6319100 4531600 9147500 5147300 4547600 5875700 8025700 13493000 16233000 9097500 9667700 22009000 52273 278 46939 439002;439003;439004;439005;439006;439007;439008;439009;439010;439011;439012;439013 347141 347141 1 TLNEWSSQINPDLVR Unmodified 1770.8901 0.89006221 1541 P48507 GCLM Glutamate--cysteine ligase regulatory subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 79.807 79.919 2 8.6469E-10 91592 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 94.122 73.083 5945100 0 0 0 0 0 0 0 0 0 0 0 0 0 5945100 0 52274 1541 46940 439014;439015;439016 347142;347143;347144;347145 347145 4 TLNFEDQTSTDNVSITK Unmodified 1911.9062 0.90616578 392 O60293 ZFC3H1 Zinc finger C3H1 domain-containing protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 65.635 65.265 2 1.6586E-37 74855 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 161.63 153.52 101990000 0 19363000 0 3368600 5121100 5986700 6352600 5446700 5130500 7501600 8911200 10452000 8601300 7480000 8278900 52275 392 46941 439017;439018;439019;439020;439021;439022;439023;439024;439025;439026;439027;439028;439029 347146;347147;347148;347149;347150;347151;347152;347153;347154;347155;347156;347157;347158 347152 13 TLNGGSDAQDGNQPQHNGESNEDSK Unmodified 2598.0815 0.081457396 505 O75475 PSIP1 PC4 and SFRS1-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 11.531 11.17 3 1.0311E-90 10138 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 124.14 120.27 122470000 0 23457000 0 11788000 5031800 7643100 6108200 6001000 6799100 6767800 7155100 10304000 11625000 7244200 12545000 52276 505 46942 439030;439031;439032;439033;439034;439035;439036;439037;439038;439039;439040;439041;439042;439043 347159;347160;347161;347162;347163;347164;347165;347166;347167;347168;347169;347170;347171;347172 347172 14 TLNGSEMASATLFK Unmodified 1468.7232 0.7231798 5073 Q9UQR0 SCML2 Sex comb on midleg-like protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 79.7 74.988 2 2.2398E-18 93338 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.84 113.38 69581000 0 69581000 0 0 0 0 0 0 0 0 0 0 0 0 0 52277 5073 46943 439044 347173 347173 1 TLNIFLTK Unmodified 948.56442 0.56441796 3496 Q8TD19 NEK9 Serine/threonine-protein kinase Nek9 yes yes 0 0 0 By MS/MS 2 0 1 1 83.756 75.626 2 0.018712 98944 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.177 34.498 30289000 30289000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52278 3496 46944 439045 347174 347174 1 TLNIPVISEK Unmodified 1112.6441 0.64412484 3223 Q8IV50 LYSMD2 LysM and putative peptidoglycan-binding domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 75.826 75.519 2 0.0033866 87020 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.679 48.47 207420000 0 120490000 0 4665100 4927100 6292900 7094500 5085400 5796600 6195700 8950100 10949000 6670600 5853200 14455000 52279 3223 46945 439046;439047;439048;439049;439050;439051;439052;439053;439054;439055;439056;439057;439058 347175;347176;347177;347178;347179;347180;347181;347182;347183;347184;347185;347186;347187;347188 347186 14 TLNMTTSPEEK Oxidation (M) 1265.5809 0.58093224 1612 P49915 GMPS GMP synthase [glutamine-hydrolyzing] yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 8.08 3.33 2 1 9 1 2 1 1 1 1 1 1 1 1 1 16.046 15.258 2 3.0563E-09 18619 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.16 112.34 259250000 17986000 123180000 0 0 0 12291000 7091700 4753000 0 9811100 15226000 19605000 14399000 13459000 21447000 52280 1612 46946 439059;439060;439061;439062;439063;439064;439065;439066;439067;439068;439069;439070 347189;347190;347191;347192;347193;347194;347195;347196;347197;347198;347199 347193 2592 8 TLNMTTSPEEK Unmodified 1249.586 0.58601761 1612 P49915 GMPS GMP synthase [glutamine-hydrolyzing] yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 33.555 32.49 2 4.2467E-09 43575 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 131.5 101.34 797170000 26137000 443630000 3383800 11131000 8495000 42753000 16129000 14201000 12020000 31487000 37890000 31499000 21847000 29413000 67145000 52281 1612 46946 439071;439072;439073;439074;439075;439076;439077;439078;439079;439080;439081;439082;439083;439084;439085;439086 347200;347201;347202;347203;347204;347205;347206;347207;347208;347209;347210;347211;347212;347213;347214;347215;347216;347217 347209 18 TLNNDLGPNWR Unmodified 1298.6367 0.63674805 3468 Q8NI60 ADCK3 Atypical kinase ADCK3, mitochondrial yes yes 0 0 0 By MS/MS 10 0 1 1 58.656 58.139 2 0.015018 66706 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 44.98 28.647 3558900 0 0 0 0 3558900 0 0 0 0 0 0 0 0 0 0 52282 3468 46947 439087 347218 347218 1 TLNNKFASFIDK Unmodified 1396.7351 0.73506511 79;74;66;58;779;67;69;88;80;96;960;2056;83;53;105;107;98 CON__P35908v2;P35908;CON__P35908;P04259;CON__P05787;P05787;CON__Q9H552;CON__P50446;CON__Q8BGZ7;CON__Q01546;P12035;CON__P12035;Q01546;CON__P13647;P13647;CON__O95678;O95678;CON__P02538;P02538;CON__P04259;CON__Q5XKE5;Q5XKE5;CON__P08729;CON__Q3KNV1;P08729;CON__Q6ISB0;CON__Q9NSB2;Q9NSB2;CON__Q9DCV7 KRT2;KRT6B;KRT8;KRT3;KRT76;KRT5;KRT75;KRT6A;KRT79;KRT7;KRT84 Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 8;Keratin, type II cytoskeletal 3;Keratin, type II cytoskeletal 2 oral;Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 79;Keratin, type II cytoskeletal 7;Keratin, type II cuticular Hb4 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 67.722 67.767 3 0.014983 77602 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 39.561 23.697 + 49735000 0 0 0 5684700 0 6871100 0 7294600 4130300 3928900 0 11762000 10064000 0 0 52283 79;779;67;80;105;83;960;2056;74;53;58;66;96;69;88;98;107 46948 439088;439089;439090;439091;439092;439093;439094 347219 347219 1 TLNNQFASFIDK Unmodified 1396.6987 0.69867961 100 CON__Q7RTT2;CON__Q8N1N4-2;Q8N1N4 KRT78 Keratin, type II cytoskeletal 78 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.049 79.107 2 4.0721E-17 91063 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 145.46 78.889 + 935970000 0 0 0 136610000 34387000 56189000 36949000 222970000 44106000 87547000 56777000 121930000 61882000 33748000 42870000 52284 100 46949 439095;439096;439097;439098;439099;439100;439101;439102;439103;439104;439105;439106 347220;347221;347222;347223;347224;347225;347226;347227;347228;347229;347230;347231 347223 11 TLNQQLTNHIR Unmodified 1336.7211 0.72114638 1630 P50570 DNM2 Dynamin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 2 2 2 1 2 1 2 39.45 39.599 2;3 2.0671E-05 42682 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 123.86 110.74 698000000 0 0 0 37354000 36994000 60348000 65673000 44929000 41250000 67815000 54167000 64210000 70369000 53409000 101480000 52285 1630 46950 439107;439108;439109;439110;439111;439112;439113;439114;439115;439116;439117;439118;439119;439120;439121;439122;439123;439124;439125;439126;439127;439128 347232;347233;347234;347235;347236;347237;347238;347239;347240;347241;347242;347243;347244;347245;347246;347247;347248 347238 15 TLNRIQSK Unmodified 958.55598 0.55597854 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 1 By MS/MS 2 0 1 1 12.541 8.5985 2 0.014836 13210 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 125.04 61.732 32960000 32960000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52286 528 46951 439129 347249 347249 1 TLNSNDPVQNVVQVLEK Unmodified 1895.9953 0.99525556 4350 Q9H1H9 KIF13A Kinesin-like protein KIF13A yes yes 0 0 0 By MS/MS 3 0 1 1 91.642 88.422 2 0.00010303 106094 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 88.552 75.352 2710800 0 2710800 0 0 0 0 0 0 0 0 0 0 0 0 0 52287 4350 46952 439130 347250 347250 1 TLPAAPASTNTTATPSLTHMVPAK Unmodified 2377.2311 0.23114551 3290 Q8IZ21 PHACTR4 Phosphatase and actin regulator 4 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 72.255 72.534 3 0.00092185 82890 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 30.585 22.592 16369000 0 0 0 0 0 0 0 0 0 0 0 0 0 6409400 9959400 52288 3290 46953 439131;439132 347251 347251 1 TLPADVQNYYSR Unmodified 1425.6888 0.6888432 4030 Q99590 SCAF11 Protein SCAF11 yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 60.356 60.455 2 0.0013009 68781 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 69.01 56.726 84003000 0 0 0 4660200 6737600 2096700 6680500 5320500 0 7484000 14010000 10499000 7807700 9125700 9580400 52289 4030 46954 439133;439134;439135;439136;439137;439138;439139;439140;439141;439142;439143 347252;347253;347254;347255;347256;347257;347258 347255 7 TLPAHSDPVSAVHFNR Unmodified 1746.8802 0.88016622 1865 P61964 WDR5 WD repeat-containing protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 2 2 1 2 2 1 1 2 1 2 1 1 52.842 52.924 3;4 0.0022758 60772 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 44.567 38.269 415200000 0 0 0 27884000 21684000 26289000 22807000 34287000 26107000 19950000 46187000 24285000 61972000 53885000 49863000 52290 1865 46955 439144;439145;439146;439147;439148;439149;439150;439151;439152;439153;439154;439155;439156;439157;439158;439159;439160;439161 347259;347260;347261;347262;347263;347264;347265;347266;347267;347268;347269;347270;347271 347270 13 TLPDEVLTK Unmodified 1014.5597 0.55972651 4278 Q9BZZ5 API5 Apoptosis inhibitor 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 53.822 52.505 2 0.0043186 64146 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 114.28 57 3364100000 29459000 1918600000 26864000 64940000 65200000 132280000 95056000 78988000 76852000 142930000 147850000 166900000 133770000 108890000 175490000 52291 4278 46956 439162;439163;439164;439165;439166;439167;439168;439169;439170;439171;439172;439173;439174;439175;439176;439177 347272;347273;347274;347275;347276;347277;347278;347279;347280;347281;347282;347283;347284;347285;347286 347278 11 TLPGPLALTSLEHK Unmodified 1475.8348 0.83477916 4801 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 86.783 81.645 3 0.00035184 103922 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.102 69.224 61422000 36403000 21681000 3338000 0 0 0 0 0 0 0 0 0 0 0 0 52292 4801 46957 439178;439179;439180 347287;347288;347289 347288 3 TLPGSDWTPNAQFITR Unmodified 1802.8951 0.89514758 1779 P56192 MARS Methionine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.686 81.748 2 1.0566E-23 94290 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 122.39 101.61 106400000 0 0 0 1439000 4239100 12169000 3329400 9106400 4116300 14653000 10674000 8820800 3295600 6419700 28142000 52293 1779 46958 439181;439182;439183;439184;439185;439186;439187;439188;439189;439190;439191;439192 347290;347291;347292;347293;347294;347295;347296;347297;347298;347299;347300;347301;347302 347293 13 TLPGWNTDISNAR Unmodified 1443.7106 0.71064128 1283 P30520 ADSS Adenylosuccinate synthetase isozyme 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 69.038 68.526 2 0.00077332 77824 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.701 72.458 76514000 0 20543000 0 4028100 1349400 0 0 2846600 0 3925900 9342200 5998200 0 6097000 22383000 52294 1283 46959 439193;439194;439195;439196;439197;439198;439199;439200;439201;439202 347303;347304;347305;347306;347307;347308;347309 347306 7 TLPGWNTDISNARAFK Unmodified 1789.9111 0.911132 1283 P30520 ADSS Adenylosuccinate synthetase isozyme 2 yes yes 0 0 1 By MS/MS 2 0 1 1 81.342 73.211 3 0.00044945 95946 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 59.68 48.574 20287000 20287000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52295 1283 46960 439203 347310 347310 1 TLPLFYGSIVR Unmodified 1264.718 0.71795849 28 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 87.678 87.818 2 0.016501 101831 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 44.309 32.819 25935000 0 0 0 0 0 3399500 1091600 1724700 1906000 3110400 1554300 2248700 832840 1797200 8269900 52296 28 46961 439204;439205;439206;439207;439208;439209;439210;439211;439212;439213 347311;347312;347313;347314;347315;347316;347317 347311 7 TLPLTTAPEAGEVTPSDSGGQEDSPAK Unmodified 2654.2559 0.25589951 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 68.498 68.74 3 4.3552E-14 78901 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 54.521 48.728 65609000 0 0 0 0 0 0 6538300 0 5004700 6713800 14133000 7887000 8571400 6444600 10316000 52297 645 46962 439214;439215;439216;439217;439218;439219;439220;439221 347318;347319;347320;347321;347322;347323;347324;347325;347326 347326 9 TLPNASTVDNIR Unmodified 1299.6783 0.67827852 1418 P40692 MLH1 DNA mismatch repair protein Mlh1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.389 52.535 2 2.5886E-05 59059 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 100.48 85.326 634560000 0 0 0 28132000 30544000 43031000 45602000 50822000 27610000 71456000 62833000 61422000 68171000 56936000 88002000 52298 1418 46963 439222;439223;439224;439225;439226;439227;439228;439229;439230;439231;439232;439233 347327;347328;347329;347330;347331;347332;347333;347334;347335;347336;347337;347338;347339 347332 13 TLPPALAALR Unmodified 1021.6284 0.6284152 3652 Q92696 RABGGTA Geranylgeranyl transferase type-2 subunit alpha yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 78.291 78.331 2 0.013788 90104 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.059 39.648 14233000 0 0 0 1528300 0 0 0 0 963540 3042400 0 0 0 3032800 5666200 52299 3652 46964 439234;439235;439236;439237;439238 347340 347340 1 TLPPATSTEPSVILSK Unmodified 1639.9033 0.90325265 3147 Q86UE4 MTDH Protein LYRIC yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 2 1 6 3 1 1 1 1 1 1 73.3 71.814 2;3 0.00094283 89737 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.469 69.639 136000000 0 119030000 0 2382900 1588300 0 2255800 0 0 0 3467000 4134800 0 3147100 0 52300 3147 46965 439239;439240;439241;439242;439243;439244;439245;439246;439247 347341;347342;347343;347344;347345;347346 347343 6 TLPQLPNEEK Unmodified 1167.6136 0.61355299 2759 Q5SW79 CEP170 Centrosomal protein of 170 kDa yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 51.261 51.385 2 0.0024552 58113 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 103.8 80.761 135990000 0 0 0 10330000 7929600 9534900 9069100 9200000 10391000 15811000 0 18691000 17131000 9516700 18386000 52301 2759 46966 439248;439249;439250;439251;439252;439253;439254;439255;439256;439257;439258 347347;347348;347349;347350;347351;347352;347353;347354;347355;347356 347354 10 TLPQQESLEIELAEEK Unmodified 1855.9415 0.94148865 2833 Q5VZK9 LRRC16A Leucine-rich repeat-containing protein 16A yes yes 0 0 0 By MS/MS 2.5 0.5 2 2 4 81.185 77.167 2;3 5.2066E-45 95927 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 197.07 168.12 175960000 0 175960000 0 0 0 0 0 0 0 0 0 0 0 0 0 52302 2833 46967 439259;439260;439261;439262 347357;347358;347359;347360 347357 4 TLPQQESLEIELAEEKPVK Unmodified 2180.1576 0.15762944 2833 Q5VZK9 LRRC16A Leucine-rich repeat-containing protein 16A yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 81.822 75.404 3 0.0025895 95691 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 42.679 34.391 38986000 11096000 27890000 0 0 0 0 0 0 0 0 0 0 0 0 0 52303 2833 46968 439263;439264 347361;347362 347361 2 TLPSHLCTSALLSK Unmodified 1526.8127 0.81266351 589 O94822 LTN1 E3 ubiquitin-protein ligase listerin yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 75.321 67.191 3 0.00093197 88690 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.995 41.368 21166000 21166000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52304 589 46969 439265;439266 347363;347364 347364 2 TLPSNSQGIPPFLR Unmodified 1525.8253 0.8252771 2108 Q04864 REL Proto-oncogene c-Rel yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 81.393 81.39 2 0.001991 93707 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.726 42.067 34964000 0 0 0 2511700 0 0 0 0 0 0 11840000 0 0 0 20612000 52305 2108 46970 439267;439268;439269 347365;347366;347367 347365 3 TLPSTDVAQPPSDSDAVGPR Unmodified 2008.9702 0.97016302 3338 Q8N554 ZNF276 Zinc finger protein 276 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 58.267 58.539 2 0.026997 66368 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 35.3 26.787 30243000 0 0 0 0 0 4639300 0 0 2524600 4149400 0 5749000 4905100 3484600 4791400 52306 3338 46971 439270;439271;439272;439273;439274;439275;439276 347368 347368 1 TLPSTSSSGSK Unmodified 1050.5193 0.51931826 869 P08651 NFIC Nuclear factor 1 C-type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 11.069 11.212 2 0.022845 9956 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 41.724 13.55 1266200000 0 0 0 0 0 0 354870000 0 214060000 367860000 0 0 0 329460000 0 52307 869 46972 439277;439278;439279;439280 347369;347370 347370 2 TLPTMNNLISQDK Unmodified 1473.7497 0.7497289 2838 Q63HN8 RNF213 E3 ubiquitin-protein ligase RNF213 yes yes 0 0 0 By MS/MS 2 0 1 1 78.918 74.182 2 3.8738E-09 92370 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 143.4 125.53 113460000 0 113460000 0 0 0 0 0 0 0 0 0 0 0 0 0 52308 2838 46973 439281 347371 347371 1 TLPTPSPEAYQAMLLR Unmodified 1786.9288 0.9287559 903 P0CG30;P0CG29 GSTT2B;GSTT2 Glutathione S-transferase theta-2B;Glutathione S-transferase theta-2 yes no 0 0 0 By MS/MS 10 0 1 1 87.244 87.403 2 0.0056394 101042 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.54 26.979 6183100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6183100 52309 903 46974 439282 347372 347372 1 TLPVLLLYSIK Unmodified 1258.7901 0.7900608 4584 Q9NR09 BIRC6 Baculoviral IAP repeat-containing protein 6 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 96.246 96.418 2 0.0048314 112015 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.518 55.037 2631500 0 0 0 0 0 0 0 735780 0 0 0 0 0 0 1895700 52310 4584 46975 439283;439284 347373 347373 1 TLPVSSLVEEGEK Unmodified 1386.7242 0.72422566 5186 Q9Y485 DMXL1 DmX-like protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 76.389 71.552 2 0.034867 89320 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 45.077 29.448 68426000 0 68426000 0 0 0 0 0 0 0 0 0 0 0 0 0 52311 5186 46976 439285 347374 347374 1 TLQAGLSSNHVSHGEVLRK Unmodified 2032.0814 0.081385224 624 O95163 IKBKAP Elongator complex protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 35.649 35.937 4 0.016676 39811 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 20.949 13.89 40929000 0 0 0 0 0 6138200 0 0 6642300 0 0 0 0 0 28148000 52312 624 46977 439286;439287;439288 347375;347376 347375 2 TLQALQIPAAK Unmodified 1152.6867 0.68665836 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 68.827 67.658 2 0.00029926 78479 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 107.57 80.05 5206400000 376150000 1855000000 13711000 362370000 187160000 318550000 229230000 153420000 155590000 268360000 291630000 297060000 208940000 174550000 314760000 52313 1518 46978 439289;439290;439291;439292;439293;439294;439295;439296;439297;439298;439299;439300;439301;439302;439303;439304;439305 347377;347378;347379;347380;347381;347382;347383;347384;347385;347386;347387;347388;347389;347390;347391;347392;347393;347394;347395 347394 18 TLQCLNAVR Unmodified 1073.5652 0.56516301 2756 Q5SRE5 NUP188 Nucleoporin NUP188 homolog yes yes 0 0 0 By MS/MS 10 0 1 1 43.717 43.21 2 0.035645 48811 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 46.016 28.168 4055200 0 0 0 0 4055200 0 0 0 0 0 0 0 0 0 0 52314 2756 46979 439306 347396 347396 1 TLQDQTLVQIFK Unmodified 1432.7926 0.79257999 3631 Q92576 PHF3 PHD finger protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 85.578 85.211 2 4.8765E-08 98363 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 121.73 91.566 58438000 0 15774000 0 0 0 4764700 0 2571200 5434500 5617800 4509900 5042500 3813400 3432300 7477900 52315 3631 46980 439307;439308;439309;439310;439311;439312;439313;439314;439315;439316 347397;347398;347399;347400;347401;347402;347403;347404;347405;347406 347400 10 TLQEDLVK Unmodified 944.51786 0.51786169 1179 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 41.979 42.157 2 0.014324 46503 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 70.67 18.652 104700000 0 0 0 5757300 5620700 7283600 6765400 0 6557400 10099000 13101000 12345000 9541400 11804000 15831000 52316 1179 46981 439317;439318;439319;439320;439321;439322;439323;439324;439325;439326;439327 347407;347408;347409;347410;347411;347412;347413;347414;347415;347416 347413 9 TLQEPVARPSGASSSQTPNDK Unmodified 2169.0662 0.06618867 3390 Q8NBA8 DTWD2 DTW domain-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.401 32.588 3 9.4499E-59 34536 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 99.409 90.617 450210000 0 0 0 20880000 25759000 37445000 35247000 33419000 26646000 34552000 50558000 63425000 50257000 26875000 45144000 52317 3390 46982 439328;439329;439330;439331;439332;439333;439334;439335;439336;439337;439338;439339 347417;347418;347419;347420;347421;347422;347423;347424;347425;347426;347427;347428;347429;347430;347431 347426 15 TLQEQLEK Unmodified 987.52368 0.52367535 4376 Q9H307 PNN Pinin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.695 29.887 2 0.0046703 32176 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 113.26 17.903 189590000 0 0 0 11128000 10979000 11003000 13937000 11588000 15615000 14673000 17321000 16818000 23338000 18961000 24225000 52318 4376 46983 439340;439341;439342;439343;439344;439345;439346;439347;439348;439349;439350;439351 347432;347433;347434;347435;347436;347437;347438;347439;347440;347441;347442;347443 347440 11 TLQEQSGAMNIR Unmodified 1346.6612 0.66124824 3310 Q8N1B4 VPS52 Vacuolar protein sorting-associated protein 52 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 40.437 40.626 2 3.2498E-08 44929 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 127.4 85.289 73680000 0 0 0 3657100 3390000 5485200 0 7673100 4057200 6511200 10558000 9317900 7675500 5901400 9453600 52319 3310 46984 439352;439353;439354;439355;439356;439357;439358;439359;439360;439361;439362 347444;347445;347446;347447;347448;347449;347450;347451;347452;347453 347447 10 TLQEQSGAMNIR Oxidation (M) 1362.6562 0.65616287 3310 Q8N1B4 VPS52 Vacuolar protein sorting-associated protein 52 homolog yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 25.19 25.526 2 0.0066381 26566 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 68.657 30.571 20562000 0 0 0 0 0 2654500 0 2658600 0 3230400 0 7616600 0 0 4402100 52320 3310 46984 439363;439364;439365;439366;439367 347454;347455 347455 4904 1 TLQEVTEMDSVK Unmodified 1378.665 0.66499622 1802 P58107 EPPK1 Epiplakin yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 55.972 55.56 2 2.2484E-05 62786 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 121.9 86.603 412360000 0 189770000 0 19860000 16585000 17880000 20472000 19861000 15248000 20498000 26559000 0 18839000 18583000 28197000 52321 1802 46985 439368;439369;439370;439371;439372;439373;439374;439375;439376;439377;439378;439379;439380 347456;347457;347458;347459;347460;347461;347462;347463;347464;347465;347466;347467;347468;347469;347470;347471 347463 15 TLQEVTEMDSVK Oxidation (M) 1394.6599 0.65991084 1802 P58107 EPPK1 Epiplakin yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 2 1 1 1 1 1 1 1 38.308 38.027 2 4.2737E-08 42998 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 118.4 110.18 150310000 0 37513000 0 12769000 7476700 0 9990300 11690000 0 11812000 10031000 15186000 15259000 8736700 9844500 52322 1802 46985 439381;439382;439383;439384;439385;439386;439387;439388;439389;439390;439391;439392;439393 347472;347473;347474;347475;347476;347477;347478;347479;347480;347481;347482;347483 347483 2925 10 TLQEVTQLSQEAQRIVEK Unmodified 2099.1222 0.12224699 1426 P40939 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 0 0 1 By MS/MS 2 0 1 1 90.056 85.16 3 5.2849E-05 105862 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.795 54.113 13023000 0 13023000 0 0 0 0 0 0 0 0 0 0 0 0 0 52323 1426 46986 439394 347484 347484 1 TLQIFNIEMK Oxidation (M) 1251.6533 0.65330932 2040;1723 P53675;Q00610 CLTCL1;CLTC Clathrin heavy chain 2;Clathrin heavy chain 1 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 80.416 78.882 1;2 0.00061912 91532 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 111.46 77.234 1098100000 496970000 227440000 86978000 9781900 13003000 23600000 17559000 17191000 14132000 32826000 29892000 35165000 18228000 20940000 54428000 52324 1723;2040 46987 439395;439396;439397;439398;439399;439400;439401;439402;439403;439404;439405;439406;439407;439408;439409;439410;439411 347485;347486;347487;347488;347489;347490;347491;347492;347493;347494;347495;347496;347497;347498;347499;347500;347501;347502;347503;347504;347505 347497 2801 20 TLQIFNIEMK Unmodified 1235.6584 0.6583947 2040;1723 P53675;Q00610 CLTCL1;CLTC Clathrin heavy chain 2;Clathrin heavy chain 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87.037 85.911 2 7.3806E-06 107986 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.38 70.016 510300000 347180000 59801000 25991000 907070 0 6539300 0 4169000 3066100 6542400 5864400 5900400 2889200 7000100 34450000 52325 1723;2040 46987 439412;439413;439414;439415;439416;439417;439418;439419;439420;439421;439422;439423;439424;439425 347506;347507;347508;347509;347510;347511;347512;347513;347514;347515;347516;347517;347518;347519;347520 347509 15 TLQLDNNFEVK Unmodified 1319.6721 0.67213051 5017 Q9UMS4 PRPF19 Pre-mRNA-processing factor 19 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 69.548 68.288 2 0.00033606 77497 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 122.94 84.646 1700800000 41589000 1307500000 16747000 9764300 20501000 23981000 22362000 22111000 19486000 38194000 39575000 28076000 21477000 35648000 53861000 52326 5017 46988 439426;439427;439428;439429;439430;439431;439432;439433;439434;439435;439436;439437;439438;439439;439440;439441 347521;347522;347523;347524;347525;347526;347527;347528;347529;347530;347531;347532;347533;347534;347535 347524 14 TLQLEYRFETVQK Unmodified 1653.8726 0.87262123 4064 Q99829 CPNE1 Copine-1 yes yes 0 0 1 By MS/MS 2 0 1 1 78.581 70.45 3 0.0076458 92502 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.343 46.166 25203000 25203000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52327 4064 46989 439442 347536 347536 1 TLQLVEEK Unmodified 958.53351 0.53351176 2567 Q15723 ELF2 ETS-related transcription factor Elf-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 43.292 42.912 2 0.0060877 47716 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 103.83 55.917 150170000 0 46278000 0 0 7970400 0 10480000 8175200 10060000 11718000 15714000 13315000 14385000 12077000 0 52328 2567 46990 439443;439444;439445;439446;439447;439448;439449;439450;439451;439452;439453 347537;347538;347539;347540;347541;347542;347543;347544;347545;347546;347547 347543 11 TLQLVEEKPADGNK Unmodified 1540.8097 0.80968662 2567 Q15723 ELF2 ETS-related transcription factor Elf-2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 40.373 40.567 3 0.034696 46007 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 29.363 21.312 60974000 0 0 0 7785800 6828100 0 6557600 0 1503500 6339600 5922300 8350600 7146800 5356200 5183200 52329 2567 46991 439454;439455;439456;439457;439458;439459;439460;439461;439462;439463 347548;347549;347550 347549 2 TLQLWLDNPK Unmodified 1226.6659 0.66592292 397 O60341 KDM1A Lysine-specific histone demethylase 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 79.164 79.345 2 0.0017577 91303 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.358 66.631 9929100 0 0 0 0 0 0 0 0 0 0 0 0 0 4769900 5159200 52330 397 46992 439464;439465;439466 347551;347552;347553 347551 3 TLQNREHETNGVAK Unmodified 1595.8016 0.80158155 1448 P42224 STAT1 Signal transducer and activator of transcription 1-alpha/beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 8.9553 8.1914 3 0.02116 14015 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.606 34.188 179610000 140670000 8341200 5986400 0 795840 1301700 0 1743300 0 5390400 0 4422300 1856100 3399400 5695300 52331 1448 46993 439467;439468;439469;439470;439471;439472;439473;439474;439475;439476;439477 347554;347555;347556;347557 347555 3 TLQPSSQNTK Unmodified 1102.5619 0.56185177 2235 Q13112 CHAF1B Chromatin assembly factor 1 subunit B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 9.3804 9.1786 2 0.00091174 6542 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 114.89 88.511 42782000 4122100 0 0 2686200 3178300 2671100 2737800 0 1743500 2118100 7708400 4602200 4300500 2109700 4803800 52332 2235 46994 439478;439479;439480;439481;439482;439483;439484;439485;439486;439487;439488;439489 347558;347559;347560;347561;347562;347563;347564;347565;347566 347561 8 TLQQEREDLNK Unmodified 1372.6947 0.69465686 2809 Q5VT25 CDC42BPA Serine/threonine-protein kinase MRCK alpha yes yes 0 0 1 By MS/MS 2 0 1 1 22.946 20.08 3 0.026104 25446 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 42.718 23.076 5356500 0 0 5356500 0 0 0 0 0 0 0 0 0 0 0 0 52333 2809 46995 439490 347567 347567 1 TLQQFPGGSIDLQK Unmodified 1530.8042 0.80420731 4638 Q9NTX5 ECHDC1 Ethylmalonyl-CoA decarboxylase yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching 8.67 2.98 1 5 1 1 1 1 1 1 73.264 71.908 2 0.012763 82995 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 52.391 38.661 47114000 4653200 0 0 0 6517100 12346000 7475200 0 5522900 10600000 0 0 0 0 0 52334 4638 46996 439491;439492;439493;439494;439495;439496 347568;347569 347568 2 TLQQNAESR Unmodified 1045.5152 0.51523593 693 O95816 BAG2 BAG family molecular chaperone regulator 2 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 8.1616 8.4409 2 0.0031845 5993 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 123.86 80.86 104520000 0 0 0 0 0 0 0 0 0 23611000 2208200 0 0 28884000 49821000 52335 693 46997 439497;439498;439499;439500 347570 347570 1 TLQQNAESRFN Unmodified 1306.6266 0.6265773 693 O95816 BAG2 BAG family molecular chaperone regulator 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 34.813 34.092 2 2.6457E-58 37480 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 193.82 161.89 1542200000 0 1091700000 47839000 21684000 20378000 21513000 22981000 28092000 23864000 26609000 40438000 50946000 32638000 35031000 78440000 52336 693 46998 439501;439502;439503;439504;439505;439506;439507;439508;439509;439510;439511;439512;439513;439514;439515 347571;347572;347573;347574;347575;347576;347577;347578;347579;347580;347581;347582;347583;347584;347585;347586 347573 14 TLQQQTFK Unmodified 992.5291 0.52909508 1745;1746 P54725;P54727 RAD23A;RAD23B UV excision repair protein RAD23 homolog A;UV excision repair protein RAD23 homolog B no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.12 3.72 4 2 10 2 3 1 1 1 1 1 1 1 1 1 1 1 25.809 24.31 2 0.0025317 33973 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 121.62 83.381 4930600000 273820000 4022800000 57422000 27820000 13659000 23717000 26194000 19450000 14356000 0 0 145540000 0 0 305830000 52337 1745;1746 46999 439516;439517;439518;439519;439520;439521;439522;439523;439524;439525;439526;439527;439528;439529;439530;439531 347587;347588;347589;347590;347591;347592;347593;347594;347595;347596;347597;347598;347599;347600;347601;347602;347603;347604;347605 347598 14 TLQRRDLDNAIEAVDEFAFLEGTLD Unmodified 2850.4036 0.4035668 4590 Q9NR33 POLE4 DNA polymerase epsilon subunit 4 yes yes 0 0 2 By MS/MS 2 0 1 1 100.28 92.149 3 1.3373E-20 118677 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.117 80.684 33483000 33483000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52338 4590 47000 439532 347606 347606 1 TLQSLACGK Unmodified 976.50117 0.50116577 2332;2331 Q13619;Q13620 CUL4A;CUL4B Cullin-4A;Cullin-4B no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 31.982 32.155 2 0.0051115 35097 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 83.265 43.162 131050000 0 0 0 5619900 6746300 11602000 10060000 8107800 6353800 14467000 14922000 20640000 0 10722000 21814000 52339 2331;2332 47001 439533;439534;439535;439536;439537;439538;439539;439540;439541;439542;439543 347607;347608;347609;347610;347611;347612;347613;347614;347615;347616;347617 347608 11 TLQTDSIDSFETQR Unmodified 1639.7689 0.76894402 820 P06400 RB1 Retinoblastoma-associated protein yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 62.449 62.539 2 0.011038 71554 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.498 47.752 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52340 820 47002 439544;439545 347618;347619 347618 2 TLQTEQEANTEGQK Unmodified 1575.7376 0.73764389 4077 Q99996 AKAP9 A-kinase anchor protein 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 15.966 16.181 2 1.1387E-16 15712 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 122.7 97.314 27007000 0 0 0 0 0 1791100 1906300 1500700 2008000 3161500 0 4548200 4937500 2723800 4430000 52341 4077 47003 439546;439547;439548;439549;439550;439551;439552;439553;439554 347620;347621;347622;347623;347624;347625 347625 4 TLQTISLLGYMK Unmodified 1366.753 0.75302336 389 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes yes 0 0 0 By MS/MS 10 0 1 1 87.705 87.855 2 0.0323 101626 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.585 20.97 2435300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2435300 52342 389 47004 439555 347626 347626 1 TLQTMQNFQK Unmodified 1237.6125 0.61250714 5072 Q9UQN3 CHMP2B Charged multivesicular body protein 2b yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 43.862 42.633 2 0.00091675 46550 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 114.28 92.195 119760000 16758000 61459000 0 4466500 3525600 0 4064600 4616900 4192000 0 0 6324100 0 3942300 10414000 52343 5072 47005 439556;439557;439558;439559;439560;439561;439562;439563;439564;439565 347627;347628;347629;347630;347631;347632;347633;347634 347629 8 TLQTMQNFQK Oxidation (M) 1253.6074 0.60742176 5072 Q9UQN3 CHMP2B Charged multivesicular body protein 2b yes yes 0 1 0 By MS/MS 10 0 1 1 25.717 26.392 2 0.035613 27188 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.867 41.504 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52344 5072 47005 439566 347635 347635 1 TLQVLIK Unmodified 813.53239 0.53238955 3081 Q7Z3B4 NUP54 Nucleoporin p54 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 57.416 57.533 2 0.040879 64011 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.398 17.362 121860000 0 0 0 6922100 6666400 12092000 8957300 11797000 0 11201000 13245000 13669000 10909000 10706000 15691000 52345 3081 47006 439567;439568;439569;439570;439571;439572;439573;439574;439575;439576;439577 347636;347637 347637 2 TLQVLLPDLAAK Unmodified 1280.7704 0.77038799 2310 Q13535 ATR Serine/threonine-protein kinase ATR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 86.497 86.592 2 0.018647 100575 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 41.399 30.592 18807000 0 0 0 0 2418400 2470800 0 1955500 2057700 2957300 2909100 4038500 0 0 0 52346 2310 47007 439578;439579;439580;439581;439582;439583;439584;439585 347638;347639 347639 2 TLQVNCEEIPALK Unmodified 1513.781 0.78102903 5193 Q9Y4C1 KDM3A Lysine-specific demethylase 3A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.201 74.261 2 1.197E-12 85072 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 126.71 40.977 123260000 0 0 0 7135000 9674500 8545400 10401000 9735800 9205900 10947000 13841000 13290000 9411500 9003200 12069000 52347 5193 47008 439586;439587;439588;439589;439590;439591;439592;439593;439594;439595;439596;439597 347640;347641;347642;347643;347644;347645;347646;347647;347648;347649;347650;347651 347643 12 TLQVQAAQFAK Unmodified 1203.6612 0.66117189 1987 P78537 BLOC1S1 Biogenesis of lysosome-related organelles complex 1 subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 56.65 55.994 2 6.2683E-05 63300 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 113.71 70.624 207850000 0 99770000 0 5568800 5985500 8208700 8668700 10344000 5464500 10797000 11976000 11203000 7843600 9220700 12796000 52348 1987 47009 439598;439599;439600;439601;439602;439603;439604;439605;439606;439607;439608;439609;439610;439611 347652;347653;347654;347655;347656;347657;347658;347659;347660;347661;347662;347663;347664;347665 347653 13 TLRDLIHGAPVGK Unmodified 1375.7936 0.79358304 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 1 By MS/MS By MS/MS By matching 10 0 3 1 1 1 58.264 58.404 3 0.0014212 66298 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 60.161 52.406 12508000 0 0 0 0 0 5093300 0 0 4417800 0 0 0 2996800 0 0 52349 2431 47010 439612;439613;439614 347666;347667;347668 347666 2 TLREQDDELRK Unmodified 1401.7212 0.72120596 5182 Q9Y446 PKP3 Plakophilin-3 yes yes 0 0 2 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.564 14.728 3 0.0029435 14338 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 97.594 58.014 211370000 0 0 0 17336000 7823500 12631000 9972500 23627000 11526000 21254000 17072000 29040000 20371000 16739000 23975000 52350 5182 47011 439615;439616;439617;439618;439619;439620;439621;439622;439623;439624;439625;439626 347669;347670;347671 347670 2 TLREQEIVASSPSLSGLK Unmodified 1914.0422 0.042205751 1583 P49643 PRIM2 DNA primase large subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 4 2 12 3 2 1 1 1 1 1 1 1 1 1 1 1 1 1 71.026 69.311 2;3 2.6347E-54 90337 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 179.17 125.64 661970000 470560000 33142000 10636000 5723600 7044400 12564000 10423000 10965000 10431000 14791000 15691000 15953000 9270100 8360300 26417000 52351 1583 47012 439627;439628;439629;439630;439631;439632;439633;439634;439635;439636;439637;439638;439639;439640;439641;439642;439643;439644 347672;347673;347674;347675;347676;347677;347678;347679;347680;347681;347682;347683;347684;347685;347686 347679 15 TLREQGVEEHETLLLR Unmodified 1922.0221 0.022139011 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 1 By MS/MS 10 0 1 1 56.204 56.815 3 7.847E-05 63757 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.428 64.64 10667000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10667000 52352 5187 47013 439645 347687 347687 1 TLRILYEEVDESEVEVIHVPSPALEERK Unmodified 3278.7034 0.70343722 3136 Q86TI2 DPP9 Dipeptidyl peptidase 9 yes yes 0 0 2 By MS/MS 2 0 2 2 93.915 85.784 4;5 0.0032126 111029 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 28.905 26.778 23053000 23053000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52353 3136 47014 439646;439647 347688;347689 347688 2 TLRLNQPGTPTR Unmodified 1352.7524 0.75244651 1373 P36507 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 34.519 34.645 3 0.021467 38061 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 28.791 14.982 45160000 0 0 0 2308100 1472900 0 2206400 3582900 3212700 5732100 10592000 0 0 3661000 12393000 52354 1373 47015 439648;439649;439650;439651;439652;439653;439654;439655;439656 347690;347691;347692 347690 3 TLRSSLEGPTILDIEK Unmodified 1770.9727 0.9727292 3050 Q7L576 CYFIP1 Cytoplasmic FMR1-interacting protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 84.498 76.368 3 1.3538E-07 99659 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.636 67.719 91725000 91725000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52355 3050 47016 439657 347693 347693 1 TLSALRSPDVGLYGVIPECGETYHSDLAEAK Unmodified 3347.6344 0.63437138 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 1 By MS/MS By MS/MS 2.25 0.433 3 1 2 2 88.853 82.766 3;4 1.8508E-26 105646 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.22 80.855 100550000 68798000 31748000 0 0 0 0 0 0 0 0 0 0 0 0 0 52356 1518 47017 439658;439659;439660;439661 347694;347695;347696;347697 347696 4 TLSAPQEER Unmodified 1029.5091 0.50908792 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.492 20.887 2 0.0032531 21425 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 90.657 40.616 203570000 0 0 0 0 0 0 0 17514000 0 22568000 34017000 39347000 32125000 28664000 29333000 52357 5216 47018 439662;439663;439664;439665;439666;439667;439668;439669;439670;439671;439672;439673 347698;347699;347700;347701;347702;347703;347704;347705;347706;347707;347708;347709;347710 347699 13 TLSAPQEERISAVESQPSRK Unmodified 2212.1448 0.14477334 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 2 By MS/MS 2 0 2 2 52.309 44.295 3;4 2.7611E-05 60927 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.362 54.175 120970000 120970000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52358 5216 47019 439674;439675 347711;347712 347711 2 TLSDATTK Unmodified 835.42871 0.42871234 4654 Q9NUQ9 FAM49B Protein FAM49B yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching 7.56 3.47 1 2 6 1 2 1 1 1 1 1 1 7.6875 6.6137 2 0.01948 7524 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.833 56.221 348200000 1140900 337200000 0 1122800 0 2378400 0 0 1494700 699620 0 0 1617800 0 2544800 52359 4654 47020 439676;439677;439678;439679;439680;439681;439682;439683;439684 347713;347714 347714 2 TLSDDLDEAAK Unmodified 1176.551 0.55101232 4319 Q9H0A0 NAT10 N-acetyltransferase 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 44.712 44.837 2 0.022943 50421 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 52.725 33.089 46173000 0 0 0 0 0 0 13089000 17673000 15412000 0 0 0 0 0 0 52360 4319 47021 439685;439686;439687 347715 347715 1 TLSDVEDQK Unmodified 1033.4928 0.49276916 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 19.955 18.973 2 0.0098768 20279 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 65.465 37.583 121370000 9710900 47014000 0 0 7460200 12329000 7749300 0 7372500 0 0 0 0 11865000 17873000 52361 2775 47022 439688;439689;439690;439691;439692;439693;439694;439695 347716;347717;347718;347719;347720;347721 347716 4 TLSDYNIQK Unmodified 1080.5451 0.54513908 1933 P62987;P62979;P0CG47;P0CG48 UBA52;RPS27A;UBB;UBC Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.469 36.65 2 0.0036636 40479 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 110.81 81.431 9015000000 0 0 0 886070000 312480000 354830000 272960000 422270000 208030000 418440000 1113300000 1240300000 454340000 1030100000 2301900000 52362 1933 47023 439696;439697;439698;439699;439700;439701;439702;439703;439704;439705;439706;439707 347722;347723;347724;347725;347726;347727;347728;347729;347730;347731;347732;347733;347734;347735;347736;347737 347724 16 TLSEVDYAPAGPAR Unmodified 1445.7151 0.71505795 276 O15357 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.322 52.463 2 8.2344E-17 59345 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 157.78 130.04 308320000 0 0 0 16580000 18267000 23867000 22762000 23252000 22503000 37852000 28979000 29501000 35422000 0 49340000 52363 276 47024 439708;439709;439710;439711;439712;439713;439714;439715;439716;439717;439718;439719 347738;347739;347740;347741;347742;347743;347744;347745;347746;347747;347748;347749;347750;347751 347740 13 TLSEVEESISTLISQPN Unmodified 1845.9208 0.92075321 3356 Q8N668 COMMD1 COMM domain-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 97.78 93.007 3 6.2222E-21 115117 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.624 84.044 68670000 0 68670000 0 0 0 0 0 0 0 0 0 0 0 0 0 52364 3356 47025 439720 347752 347752 1 TLSFGSDLNYATR Unmodified 1443.6994 0.69940789 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 73.484 73.648 2 0.0021051 84912 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 76.332 60.45 26979000 0 0 0 0 0 0 0 0 0 11291000 8373500 0 0 7314100 0 52365 2378 47026 439721;439722;439723;439724 347753;347754;347755;347756 347753 3 TLSFSHDGK Unmodified 990.47706 0.47705951 3887 Q96J01 THOC3 THO complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 21.563 21.782 2 0.0098739 22194 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 65.474 26.682 138490000 0 0 0 0 10450000 11066000 10217000 12107000 0 13470000 0 28488000 1459800 20350000 30879000 52366 3887 47027 439725;439726;439727;439728;439729;439730;439731;439732;439733;439734 347757;347758;347759;347760 347759 4 TLSFYFPPCGK Unmodified 1315.6271 0.62709457 4879 Q9UG63 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 0 0 0 By MS/MS 2 0 1 1 87.584 79.453 2 0.0082683 103490 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.308 63.988 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52367 4879 47028 439735 347761 347761 1 TLSGAQDSEAAFAK Unmodified 1394.6678 0.66777341 2548 Q15554 TERF2 Telomeric repeat-binding factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 41.713 41.288 2 2.036E-18 52482 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.1 108.95 196920000 0 119140000 0 5782800 5281700 9124000 8391200 6184700 6272000 11193000 10175000 0 8996600 6371600 0 52368 2548 47029 439736;439737;439738;439739;439740;439741;439742;439743;439744;439745;439746 347762;347763;347764;347765;347766;347767;347768;347769;347770;347771;347772;347773 347766 12 TLSGCPAVDSVVSLLDGVVEK Unmodified 2144.1035 0.10348538 3055 Q7L5Y9 MAEA Macrophage erythroblast attacher yes yes 0 0 0 By MS/MS 2 0 1 1 102.25 97.534 3 4.7952E-09 120449 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 56.017 48.154 7062500 0 7062500 0 0 0 0 0 0 0 0 0 0 0 0 0 52369 3055 47030 439747 347774 347774 1 TLSGMESYCVR Oxidation (M) 1317.5693 0.56932169 1642 P50991 CCT4 T-complex protein 1 subunit delta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.884 35.066 2 1.5006E-07 37598 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 145.17 139.39 548730000 0 0 0 28858000 17687000 55803000 28688000 20046000 33558000 50382000 53075000 78505000 53625000 51107000 77395000 52370 1642 47031 439748;439749;439750;439751;439752;439753;439754;439755;439756;439757;439758;439759 347775;347776;347777;347778;347779;347780;347781;347782;347783;347784;347785;347786 347783 2650 12 TLSGMESYCVR Unmodified 1301.5744 0.57440707 1642 P50991 CCT4 T-complex protein 1 subunit delta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 50.778 50.929 2 0.00039947 56592 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 86.624 81.143 725780000 0 0 0 47646000 22645000 56917000 23874000 37235000 30569000 44341000 78281000 96896000 64249000 71652000 151470000 52371 1642 47031 439760;439761;439762;439763;439764;439765;439766;439767;439768;439769;439770;439771 347787;347788;347789;347790;347791;347792;347793;347794;347795;347796;347797;347798;347799 347795 13 TLSGSSSLEDQNTVNGPVQIVNVK Unmodified 2485.266 0.26601069 3953 Q96Q15 SMG1 Serine/threonine-protein kinase SMG1 yes yes 0 0 0 By MS/MS 2 0 1 1 79.658 74.946 3 0.0030333 93339 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 31.976 24.443 45842000 0 45842000 0 0 0 0 0 0 0 0 0 0 0 0 0 52372 3953 47032 439772 347800 347800 1 TLSHNLLVSEVYNQLK Unmodified 1856.9996 0.99961265 2332 Q13620 CUL4B Cullin-4B yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 90.304 83.79 3 0.0029982 106668 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 35.473 30.501 32438000 5182700 27255000 0 0 0 0 0 0 0 0 0 0 0 0 0 52373 2332 47033 439773;439774 347801;347802 347802 2 TLSHPQQMALLDQTK Oxidation (M) 1725.872 0.8719693 5187 Q9Y490 TLN1 Talin-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.91 3.85 7 4 2 2 3 1 2 1 44.925 41.509 2;3 1.1413E-42 57767 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 153.18 132.98 771250000 314190000 229360000 163440000 0 0 18594000 0 0 0 36158000 0 0 0 9505900 0 52374 5187 47034 439775;439776;439777;439778;439779;439780;439781;439782;439783;439784;439785 347803;347804;347805;347806;347807;347808;347809;347810;347811;347812;347813;347814;347815 347810 6570 13 TLSHPQQMALLDQTK Unmodified 1709.8771 0.87705468 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 4 16 1 2 1 1 1 2 1 1 1 1 2 1 1 2 2 58.439 57.381 2;3 2.4863E-50 76536 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.73 116.22 1501700000 712470000 409200000 124810000 17811000 8415500 21763000 13825000 21122000 9850000 26560000 27112000 22404000 13989000 24291000 48116000 52375 5187 47034 439786;439787;439788;439789;439790;439791;439792;439793;439794;439795;439796;439797;439798;439799;439800;439801;439802;439803;439804;439805 347816;347817;347818;347819;347820;347821;347822;347823;347824;347825;347826;347827;347828;347829;347830;347831;347832;347833;347834;347835;347836;347837;347838;347839 347820 23 TLSIFYQAGTSK Unmodified 1314.682 0.68196691 1125 P21359 NF1 Neurofibromin;Neurofibromin truncated yes yes 0 0 0 By MS/MS 2 0 1 1 78.847 70.717 2 0.031528 92997 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.149 44.359 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52376 1125 47035 439806 347840 347840 1 TLSLVSR Unmodified 774.45995 0.45995289 2179 Q10570 CPSF1 Cleavage and polyadenylation specificity factor subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 39.893 40.074 2 0.034409 44969 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 71.296 15.791 81064000 0 0 0 4478900 5167900 6941400 7138300 0 5597600 9225200 9219600 7901100 7691900 6987000 10716000 52377 2179 47036 439807;439808;439809;439810;439811;439812;439813;439814;439815;439816;439817 347841 347841 1 TLSLVSRDAK Unmodified 1088.619 0.61897272 2179 Q10570 CPSF1 Cleavage and polyadenylation specificity factor subunit 1 yes yes 0 0 1 By MS/MS 2 0 1 1 40.5 33.878 2 0.044001 46842 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.787 43.628 17137000 17137000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52378 2179 47037 439818 347842 347842 1 TLSNESEESVK Unmodified 1221.5725 0.57247604 3457 Q8NHM5 KDM2B Lysine-specific demethylase 2B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 6.4453 3.3641 2;3 0.033025 5389 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 30.55 11.926 141510000 97892000 23183000 20431000 0 0 0 0 0 0 0 0 0 0 0 0 52379 3457 47038 439819;439820;439821;439822 347843;347844 347843 2 TLSQAIVK Unmodified 858.51747 0.51746776 244 O15042 U2SURP U2 snRNP-associated SURP motif-containing protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.467 34.65 2 0.032623 38363 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 54.205 12.903 213070000 0 0 0 8458700 10219000 19625000 14702000 11875000 12370000 20467000 26957000 26949000 18043000 17706000 25695000 52380 244 47039 439823;439824;439825;439826;439827;439828;439829;439830;439831;439832;439833;439834 347845 347845 1 TLSQGESQTSEHELFLDTK Unmodified 2149.0175 0.017507143 2834 Q5VZL5 ZMYM4 Zinc finger MYM-type protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.22 2.2 1 8 1 1 1 1 1 1 1 1 1 60.376 60.112 3 0.00026237 68383 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 50.938 46.321 92560000 0 2927000 0 0 0 0 0 6683900 8424000 17496000 8372600 6179500 15712000 13084000 13681000 52381 2834 47040 439835;439836;439837;439838;439839;439840;439841;439842;439843 347846;347847;347848;347849;347850;347851 347846 6 TLSQGSYLYLK Unmodified 1271.6762 0.67615325 4511 Q9HCD6 TANC2 Protein TANC2 yes yes 0 0 0 By MS/MS 2 0 1 1 74.472 66.342 2 0.0012313 87667 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 105.4 83.651 18999000 18999000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52382 4511 47041 439844 347852 347852 1 TLSQWIAENQDSLGSK Unmodified 1775.869 0.86899241 1338 P34949 MPI Mannose-6-phosphate isomerase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 81.982 76.109 2;3 1.6097E-39 97648 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 139.89 130.88 141010000 101210000 34928000 4873400 0 0 0 0 0 0 0 0 0 0 0 0 52383 1338 47042 439845;439846;439847;439848 347853;347854;347855;347856 347854 4 TLSSFFTPR Unmodified 1054.5447 0.54474515 1081 P18858 LIG1 DNA ligase 1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 2 1 1 1 1 1 1 69.023 69.098 2 0.0031541 85303 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 92.439 79.612 192090000 0 0 0 6280200 5473600 19639000 9110700 8041300 60370000 11372000 13131000 18093000 10799000 10624000 19152000 52384 1081 47043 439849;439850;439851;439852;439853;439854;439855;439856;439857;439858;439859;439860;439861 347857;347858;347859;347860;347861;347862;347863;347864;347865 347864 8 TLSSMIMEDTSGDYK 2 Oxidation (M) 1708.7172 0.71716772 2812 Q5VT79;P13928 ANXA8L2;ANXA8 Annexin A8-like protein 2;Annexin A8 yes no 0 2 0 By MS/MS 2 0 2 2 57.998 52.165 2 3.081E-30 66341 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.87 116 53675000 0 53675000 0 0 0 0 0 0 0 0 0 0 0 0 0 52385 2812 47044 439862;439863 347866;347867;347868 347866 4449;4450 3 TLSSMIMEDTSGDYK Oxidation (M) 1692.7223 0.7222531 2812 Q5VT79;P13928 ANXA8L2;ANXA8 Annexin A8-like protein 2;Annexin A8 yes no 0 1 0 By MS/MS 2 0 3 3 71.891 66.195 2 2.2097E-30 83732 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.17 107.93 223490000 0 223490000 0 0 0 0 0 0 0 0 0 0 0 0 0 52386 2812 47044 439864;439865;439866 347869;347870;347871 347870 4449;4450 3 TLSSMIMEDTSGDYK Unmodified 1676.7273 0.72733848 2812 Q5VT79;P13928 ANXA8L2;ANXA8 Annexin A8-like protein 2;Annexin A8 yes no 0 0 0 By MS/MS 2 0 1 1 80.193 75.481 2 2.1508E-06 93982 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.84 104.59 198290000 0 198290000 0 0 0 0 0 0 0 0 0 0 0 0 0 52387 2812 47044 439867 347872;347873 347873 2 TLSSPSNRPSGETSVPPPPAVGR Unmodified 2289.1713 0.17132244 3576 Q8WWM7 ATXN2L Ataxin-2-like protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 50.495 50.352 3 3.7779E-10 56995 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 65.855 56.572 80936000 0 0 0 15279000 17315000 0 24056000 17255000 0 0 0 0 0 7031600 0 52388 3576 47045 439868;439869;439870;439871;439872;439873 347874;347875;347876;347877;347878;347879;347880;347881;347882;347883 347875 10 TLSSSSMDLSR Unmodified 1182.5551 0.55505184 4321 Q9H0B6 KLC2 Kinesin light chain 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.491 40.669 2 0.0022781 44716 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 79.974 56.019 103590000 0 0 0 5562700 6945900 7559700 8349600 9787600 6726800 8272100 12534000 10370000 7029300 7077700 13378000 52389 4321 47046 439874;439875;439876;439877;439878;439879;439880;439881;439882;439883;439884;439885 347884;347885;347886;347887;347888;347889;347890;347891;347892;347893;347894 347892 11 TLSSSSMDLSRR Unmodified 1338.6562 0.65616287 4321 Q9H0B6 KLC2 Kinesin light chain 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 34.58 34.69 3 8.3176E-05 37554 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 85.288 47.863 78714000 0 0 0 6882900 6910800 0 5488000 7996000 5888600 11128000 0 0 9540300 8400900 16478000 52390 4321 47047 439886;439887;439888;439889;439890;439891;439892;439893;439894;439895 347895;347896;347897;347898;347899;347900;347901 347897 7 TLSSVQNEVQEALQR Unmodified 1700.8693 0.86932676 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS 10 0 12 1 1 1 1 1 2 1 1 1 1 1 79.068 79.172 2;3 0.00030516 91532 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 48.899 36.066 167300000 0 0 0 0 4435200 7799900 5591600 14299000 10420000 48984000 15144000 15495000 5790700 10932000 28414000 52391 965 47048 439896;439897;439898;439899;439900;439901;439902;439903;439904;439905;439906;439907 347902;347903;347904;347905;347906;347907 347904 6 TLSTIATSTDAASVVHSTDLVVEAIVENLK Unmodified 3083.6238 0.62378991 2636 Q16836 HADH Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 104.82 98.379 3 2.7015E-26 124074 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.847 74.552 15735000 5469500 10266000 0 0 0 0 0 0 0 0 0 0 0 0 0 52392 2636 47049 439908;439909 347908;347909 347908 2 TLSTSDDVEDRENEK Unmodified 1736.7701 0.77006623 3733 Q96A65 EXOC4 Exocyst complex component 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.583 21.791 3 5.3429E-27 21637 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 129.77 117.57 189590000 0 0 0 9100700 6847400 20508000 13845000 0 11197000 19964000 21746000 30559000 20261000 14474000 21090000 52393 3733 47050 439910;439911;439912;439913;439914;439915;439916;439917;439918;439919;439920;439921 347910;347911;347912;347913;347914;347915;347916;347917;347918;347919;347920;347921;347922;347923 347915 14 TLSVAAAFNEDEDSEPEEMPPEAK Oxidation (M) 2621.1327 0.13267283 3570 Q8WW12 PCNP PEST proteolytic signal-containing nuclear protein yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 78.414 71.961 3 0.00039636 92814 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 41.911 40.858 156130000 40760000 115370000 0 0 0 0 0 0 0 0 0 0 0 0 0 52394 3570 47051 439922;439923 347924;347925;347926 347926 5058 3 TLSVAAAFNEDEDSEPEEMPPEAK Unmodified 2605.1378 0.13775821 3570 Q8WW12 PCNP PEST proteolytic signal-containing nuclear protein yes yes 0 0 0 By MS/MS 3 0 1 1 80.973 77.674 3 0.039738 92967 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 19.044 15.946 5317600 0 5317600 0 0 0 0 0 0 0 0 0 0 0 0 0 52395 3570 47051 439924 347927 347927 1 TLSVAIEGSVDEAK Unmodified 1417.73 0.73003931 2343 Q13769 THOC5 THO complex subunit 5 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 72.116 63.878 2 0.039266 84909 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.998 31.486 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52396 2343 47052 439925 347928 347928 1 TLSVEPSQQLDTASTEETDPETSQPEPNRPSELDLR Unmodified 3995.872 0.8719717 3518 Q8TEQ6 GEMIN5 Gem-associated protein 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 75.409 75.52 3 4.8679E-174 87224 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 146.89 145.36 105410000 0 0 0 0 4704700 9670900 3189400 6874800 6901800 12193000 11637000 15421000 7250300 7167500 20395000 52397 3518 47053 439926;439927;439928;439929;439930;439931;439932;439933;439934;439935;439936 347929;347930;347931;347932;347933;347934;347935;347936;347937;347938;347939 347938 11 TLTAAAVSGAQPILSK Unmodified 1526.8668 0.86680757 421 O60664 PLIN3 Perilipin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 70.073 70.15 2;3 1.079E-59 80405 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 174.9 154.7 7047100000 0 0 0 300330000 459530000 579580000 540880000 648320000 411240000 625850000 660040000 877360000 672320000 520240000 751390000 52398 421 47054 439937;439938;439939;439940;439941;439942;439943;439944;439945;439946;439947;439948;439949;439950;439951;439952;439953;439954;439955;439956;439957;439958;439959;439960 347940;347941;347942;347943;347944;347945;347946;347947;347948;347949;347950;347951;347952;347953;347954;347955;347956;347957;347958;347959;347960;347961;347962;347963;347964;347965;347966;347967;347968;347969;347970;347971;347972;347973;347974;347975;347976 347943 32 TLTAEEAEEEWERR Unmodified 1747.8013 0.80130678 1351 P35269 GTF2F1 General transcription factor IIF subunit 1 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 62.71 62.54 3 0.013232 71858 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 30.483 28.548 11146000 0 0 0 0 3797900 0 0 7347800 0 0 0 0 0 0 0 52399 1351 47055 439961;439962 347977;347978 347978 2 TLTAEGLVK Unmodified 930.5386 0.53859714 4642 Q9NUA8 ZBTB40 Zinc finger and BTB domain-containing protein 40 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 48.644 48.841 2 0.043067 55338 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 43.769 3.1966 72582000 0 0 0 0 5861000 0 7196500 5474000 0 10791000 9181200 0 12103000 10812000 11163000 52400 4642 47056 439963;439964;439965;439966;439967;439968;439969;439970 347979 347979 1 TLTCAFLDSGGTK Unmodified 1369.6548 0.65476588 2269 Q13315 ATM Serine-protein kinase ATM yes yes 0 0 0 By MS/MS 2 0 1 1 70.189 64.32 2 0.013995 81920 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.977 51.19 22997000 0 22997000 0 0 0 0 0 0 0 0 0 0 0 0 0 52401 2269 47057 439971 347980 347980 0 TLTDDMLDK Unmodified 1050.4903 0.49032632 4630 Q9NSV4 DIAPH3 Protein diaphanous homolog 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 49.364 49.523 2 0.0058337 55461 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.679 60.124 215860000 0 0 0 14143000 12964000 16708000 15744000 17662000 0 18053000 20570000 32295000 18582000 23324000 25819000 52402 4630 47058 439972;439973;439974;439975;439976;439977;439978;439979;439980;439981;439982 347981;347982;347983;347984;347985;347986;347987;347988 347987 7 TLTDEELADWK Unmodified 1319.6245 0.62451161 1419 P40763 STAT3 Signal transducer and activator of transcription 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 70.737 70.003 2 0.00062376 80337 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 79.148 67.984 550670000 0 491630000 0 3255600 2707900 12528000 4924400 4106200 2890600 6946200 7662000 0 5452700 8562900 0 52403 1419 47059 439983;439984;439985;439986;439987;439988;439989;439990;439991;439992;439993;439994;439995 347989;347990;347991;347992;347993;347994;347995;347996;347997;347998;347999;348000 347994 12 TLTDELAALQITGVK Unmodified 1571.877 0.8770379 3401 Q8NBQ5 HSD17B11 Estradiol 17-beta-dehydrogenase 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.62 1.7 1 20 1 1 2 1 1 2 2 2 2 2 1 2 2 89.462 89.311 2;3 5.5413E-35 103410 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 152.14 125.18 159060000 0 25876000 0 1250100 8744600 6514900 4844100 11669000 7874900 22570000 17281000 14072000 3306100 9913500 25148000 52404 3401 47060 439996;439997;439998;439999;440000;440001;440002;440003;440004;440005;440006;440007;440008;440009;440010;440011;440012;440013;440014;440015;440016 348001;348002;348003;348004;348005;348006;348007;348008;348009;348010;348011;348012;348013;348014;348015;348016;348017 348007 17 TLTDEQVVMGNK Oxidation (M) 1349.6497 0.6496805 3324 Q8N3P4 VPS8 Vacuolar protein sorting-associated protein 8 homolog yes yes 0 1 0 By MS/MS 2 0 1 1 37.403 32.488 2 0.0029982 42382 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.755 60.13 8057400 0 8057400 0 0 0 0 0 0 0 0 0 0 0 0 0 52405 3324 47061 440017 348018 348018 4913 1 TLTDEQVVMGNK Unmodified 1333.6548 0.65476588 3324 Q8N3P4 VPS8 Vacuolar protein sorting-associated protein 8 homolog yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 48.901 46.397 2 0.021439 59057 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.243 53.498 84223000 0 40774000 0 0 0 0 0 0 0 0 0 0 0 0 43449000 52406 3324 47061 440018;440019 348019;348020 348019 2 TLTDEVNSPDSDRR Unmodified 1603.7438 0.7437919 3475 Q8TAQ2 SMARCC2 SWI/SNF complex subunit SMARCC2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.513 28.708 3 0.00012219 30082 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.96 76.255 166450000 0 0 0 10881000 9891900 12826000 9449400 10164000 5236000 16517000 20001000 26397000 16104000 12347000 16632000 52407 3475 47062 440020;440021;440022;440023;440024;440025;440026;440027;440028;440029;440030;440031 348021;348022;348023;348024;348025 348021 3 TLTDEVNSPDSDRRDK Unmodified 1846.8657 0.86569795 3475 Q8TAQ2 SMARCC2 SWI/SNF complex subunit SMARCC2 yes yes 0 0 2 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.12 3.39 4 13 2 2 1 1 1 1 1 1 1 1 2 1 1 1 24.968 24.132 3;4 1.4431E-05 25819 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 83.499 67.1 395390000 58662000 0 111410000 11924000 9556400 18384000 12731000 13673000 11551000 17264000 21015000 36135000 16143000 18563000 38374000 52408 3475 47063 440032;440033;440034;440035;440036;440037;440038;440039;440040;440041;440042;440043;440044;440045;440046;440047;440048 348026;348027;348028;348029;348030;348031;348032;348033;348034;348035 348028 9 TLTDGVLDINHEQENTPSTSGK Unmodified 2355.119 0.1190121 2239 Q13136 PPFIA1 Liprin-alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 63.507 62.833 3 5.0436E-34 71777 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 103.27 97.456 182110000 0 33675000 0 9608600 9335500 15051000 9088600 12173000 9556300 14028000 13479000 15014000 13613000 12354000 15135000 52409 2239 47064 440049;440050;440051;440052;440053;440054;440055;440056;440057;440058;440059;440060;440061;440062 348036;348037;348038;348039;348040;348041;348042;348043;348044;348045;348046;348047;348048;348049;348050;348051;348052 348038 17 TLTEDEIATILQSTLK Unmodified 1774.9564 0.95641044 2227 Q13043 STK4 Serine/threonine-protein kinase 4;Serine/threonine-protein kinase 4 37kDa subunit;Serine/threonine-protein kinase 4 18kDa subunit yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 99.893 95.634 2;3 4.2417E-44 118182 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 153.38 140.8 22167000 0 22167000 0 0 0 0 0 0 0 0 0 0 0 0 0 52410 2227 47065 440063;440064;440065 348053;348054;348055 348055 3 TLTELNK Unmodified 817.45453 0.45453316 122 O00161 SNAP23 Synaptosomal-associated protein 23 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 26.076 22.442 2 0.019598 29605 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.02 37.176 63832000 0 62199000 1632400 0 0 0 0 0 0 0 0 0 0 0 0 52411 122 47066 440066;440067 348056 348056 1 TLTEPSVDFNHSDDFTPISTVQK Unmodified 2577.2235 0.22347717 2966 Q6R327 RICTOR Rapamycin-insensitive companion of mTOR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 79.091 79.19 3 1.2569E-13 91472 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 73.405 62.262 78483000 0 0 0 0 5005300 7589400 4010500 8851900 9598100 13577000 7680700 0 0 5071800 17098000 52412 2966 47067 440068;440069;440070;440071;440072;440073;440074;440075;440076 348057;348058;348059;348060;348061;348062;348063;348064 348057 8 TLTETIYK Unmodified 967.52261 0.52261272 3047 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 42.825 42.143 2 0.0075386 45770 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.296 58.792 534800000 0 190810000 5787900 23737000 29786000 30435000 31774000 26999000 30627000 0 41683000 0 38660000 34862000 49643000 52413 3047 47068 440077;440078;440079;440080;440081;440082;440083;440084;440085;440086;440087;440088 348065;348066;348067;348068;348069;348070;348071;348072;348073;348074 348068 9 TLTGALNAHNK Unmodified 1138.6095 0.60947067 4266 Q9BZH6 WDR11 WD repeat-containing protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 23.275 23.506 3 0.014171 23835 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 33.821 21.658 50640000 0 0 0 2659100 3989800 0 2784600 2937600 0 8570200 3378100 8744100 3708500 2644500 11223000 52414 4266 47069 440089;440090;440091;440092;440093;440094;440095;440096;440097;440098 348075 348075 1 TLTGLFR Unmodified 806.46504 0.46503826 904 P0CW18 PRSS56 Serine protease 56 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.109 63.204 2 0.023354 72673 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 89.673 41.5 181450000 0 0 0 11573000 11344000 12704000 14102000 18775000 8810800 14705000 16752000 17685000 16022000 14507000 24470000 52415 904 47070 440099;440100;440101;440102;440103;440104;440105;440106;440107;440108;440109;440110 348076;348077;348078;348079;348080 348079 5 TLTGVLPERQK Unmodified 1240.7139 0.71393574 3568 Q8WVY7 UBLCP1 Ubiquitin-like domain-containing CTD phosphatase 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 4 3 1 49.203 41.924 2;3 2.8468E-08 57609 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 205.59 160.25 269220000 242390000 26830000 0 0 0 0 0 0 0 0 0 0 0 0 0 52416 3568 47071 440111;440112;440113;440114 348081;348082;348083;348084 348084 3 TLTIGSAGK Unmodified 846.48108 0.48108226 2633 Q16773 CCBL1 Kynurenine--oxoglutarate transaminase 1 yes yes 0 0 0 By MS/MS 10 0 1 1 27.864 28.552 2 0.043053 29721 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.772 0 4756400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4756400 52417 2633 47072 440115 348085 348085 1 TLTLVDTGIGMTK Unmodified 1348.7272 0.72720254 862 P08238 HSP90AB1 Heat shock protein HSP 90-beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.13 3.34 9 2 35 2 6 3 3 2 3 3 2 3 4 3 3 3 3 3 78.241 77.395 2;3 5.9655E-21 97938 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 136.48 0 13380000000 153660000 2720800000 67681000 252410000 286150000 1008200000 426600000 615660000 355980000 989440000 1183500000 902530000 553810000 909880000 2953700000 52418 862 47073 440116;440117;440118;440119;440120;440121;440122;440123;440124;440125;440126;440127;440128;440129;440130;440131;440132;440133;440134;440135;440136;440137;440138;440139;440140;440141;440142;440143;440144;440145;440146;440147;440148;440149;440150;440151;440152;440153;440154;440155;440156;440157;440158;440159;440160;440161 348086;348087;348088;348089;348090;348091;348092;348093;348094;348095;348096;348097;348098;348099;348100;348101;348102;348103;348104;348105;348106;348107;348108;348109;348110;348111;348112;348113;348114;348115;348116;348117;348118;348119;348120;348121;348122;348123;348124;348125;348126;348127;348128;348129;348130;348131;348132 348111 44 TLTPDQWAR Unmodified 1086.5458 0.54580778 4379 Q9H3K6 BOLA2 BolA-like protein 2 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.921 52.067 2 0.0044372 59042 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 86.833 56.221 328190000 0 0 0 10563000 8248500 26260000 11107000 12799000 9153100 23670000 45121000 39057000 13100000 28924000 100190000 52419 4379 47074 440162;440163;440164;440165;440166;440167;440168;440169;440170;440171;440172;440173 348133;348134;348135;348136;348137;348138;348139 348134 7 TLTPDQWARER Unmodified 1371.6895 0.6895119 4379 Q9H3K6 BOLA2 BolA-like protein 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 54.749 48.698 3 0.01252 66935 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.934 41.802 62239000 58892000 0 3346500 0 0 0 0 0 0 0 0 0 0 0 0 52420 4379 47075 440174;440175 348140;348141 348141 2 TLTPGGHAEHDGK Unmodified 1318.6266 0.6265773 1706 P52943 CRIP2 Cysteine-rich protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 2 3 2 9.3329 6.2078 2;3 7.49E-05 10565 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.875 59.779 514700000 299140000 100240000 115320000 0 0 0 0 0 0 0 0 0 0 0 0 52421 1706 47076 440176;440177;440178;440179;440180;440181;440182 348142;348143;348144;348145 348144 3 TLTPGGHAEHDGQPYCHK Unmodified 2003.8908 0.89080726 1706 P52943 CRIP2 Cysteine-rich protein 2 yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 22.807 18.918 3 0.042764 23757 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 23.527 17.984 36136000 32036000 0 4100100 0 0 0 0 0 0 0 0 0 0 0 0 52422 1706 47077 440183;440184 348146 348146 1 TLTPIIQEYFEHGDTNEVAEMLRDLNLGEMK Unmodified 3605.7382 0.73818452 2696 Q53EL6 PDCD4 Programmed cell death protein 4 yes yes 0 0 1 By MS/MS 2 0 1 1 101.09 92.957 4 1.5287E-11 119708 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.688 52.682 13586000 13586000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52423 2696 47078 440185 348147 348147 1 TLTPISAAYAR Unmodified 1162.6346 0.63462279 1307 P31939 ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 58.484 58.657 2 0.00045713 66183 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 87.308 69.922 141750000 0 0 0 1846900 0 2238800 2711800 2342200 0 2244700 27338000 15484000 3161100 15613000 68765000 52424 1307 47079 440186;440187;440188;440189;440190;440191;440192;440193;440194;440195 348148;348149;348150;348151 348151 4 TLTPISGGQR Unmodified 1028.5615 0.56145784 2282 Q13415 ORC1 Origin recognition complex subunit 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 30.954 31.185 2 0.0056189 33688 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 68.224 52.07 22964000 0 0 0 0 3417800 0 0 0 0 4681300 6358200 8507000 0 0 0 52425 2282 47080 440196;440197;440198;440199 348152;348153;348154 348152 3 TLTPSYYR Unmodified 999.50255 0.50254598 4536 Q9NP72 RAB18 Ras-related protein Rab-18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 39.949 40.052 2 0.031681 44777 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 54.776 20.604 134840000 0 0 0 11929000 13183000 14688000 15241000 13998000 0 0 24076000 25364000 16358000 0 0 52426 4536 47081 440200;440201;440202;440203;440204;440205;440206;440207 348155;348156 348155 2 TLTPTPDGK Unmodified 928.48656 0.48656157 3679 Q92888 ARHGEF1 Rho guanine nucleotide exchange factor 1 yes yes 0 0 0 By MS/MS 10 0 1 1 21.508 21.674 2 0.022952 22528 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 78.377 48.57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52427 3679 47082 440208 348157 348157 1 TLTQEVEK Unmodified 946.49713 0.49712625 1322 P32519 ELF1 ETS-related transcription factor Elf-1 yes yes 0 0 0 By MS/MS 2 0 1 1 25.35 21.147 2 0.043506 27960 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.198 26.074 30817000 0 30817000 0 0 0 0 0 0 0 0 0 0 0 0 0 52428 1322 47083 440209 348158 348158 1 TLTQGGVTYR Unmodified 1094.572 0.57202253 2338 Q13643 FHL3 Four and a half LIM domains protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 31.607 32.064 2 0.002807 33665 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 79.906 46.11 22371000 0 0 0 0 0 0 0 0 0 0 4039000 0 3282800 5790500 9258500 52429 2338 47084 440210;440211;440212;440213 348159;348160;348161;348162 348161 4 TLTSDVANLANEK Unmodified 1374.6991 0.69907354 455 O75116 ROCK2 Rho-associated protein kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 64.534 64.615 2 0.00056132 73068 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 91.855 65.34 80873000 0 0 0 3359500 3371500 8811300 4408200 0 4582800 10287000 9464300 13221000 5342700 5623000 12402000 52430 455 47085 440214;440215;440216;440217;440218;440219;440220;440221;440222;440223;440224 348163;348164;348165;348166;348167;348168;348169;348170;348171;348172;348173;348174 348170 12 TLTSGGHAEHEGK Unmodified 1322.6215 0.62149192 1618 P50238 CRIP1 Cysteine-rich protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 6.55 3.8 3 2 6 2 2 1 1 1 1 1 1 1 6.0311 4.6613 3 1.7415E-21 6184 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 109.44 94.24 12609000000 5147300000 2218500000 5114200000 0 1378500 0 2977200 0 0 0 20565000 19849000 0 19834000 64027000 52431 1618 47086 440225;440226;440227;440228;440229;440230;440231;440232;440233;440234;440235 348175;348176;348177;348178;348179;348180;348181;348182;348183;348184;348185 348180 10 TLTSIVHLER Unmodified 1167.6612 0.66117189 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 1 1 1 1 1 2 2 60.199 60.347 2;3 0.0065125 68747 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 56.359 34.366 151890000 0 0 0 4339300 4029800 19108000 7187700 7799200 8909300 13719000 11154000 16000000 11217000 15951000 32472000 52432 3119 47087 440236;440237;440238;440239;440240;440241;440242;440243;440244;440245;440246;440247;440248;440249 348186;348187;348188;348189;348190;348191;348192 348186 7 TLTTMAPYLSTEDVPLAR Oxidation (M) 1994.003 0.0030430525 3522 Q8TEX9 IPO4 Importin-4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 2 1 1 1 1 1 1 1 1 1 81.358 81.414 2 0.00024975 94116 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 56.139 36.512 119480000 0 0 0 3613600 6673600 24982000 5801600 7181200 3837700 16208000 9662800 12605000 6488800 9055600 13367000 52433 3522 47088 440250;440251;440252;440253;440254;440255;440256;440257;440258;440259;440260;440261;440262 348193;348194 348193 5026 2 TLTTMAPYLSTEDVPLAR Unmodified 1978.0081 0.0081284304 3522 Q8TEX9 IPO4 Importin-4 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 86.361 86.519 2 2.3755E-05 100023 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.365 76.261 7324900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7324900 52434 3522 47088 440263;440264 348195;348196;348197 348197 3 TLTTVQGIADDYDK Unmodified 1538.7464 0.74641766 427;1442 O60739;P41567 EIF1B;EIF1 Eukaryotic translation initiation factor 1b;Eukaryotic translation initiation factor 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 66.592 65.715 2 1.6823E-26 75369 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 153.95 145.36 2173400000 0 1890100000 8265100 8060700 6512600 11853000 15770000 11678000 6589200 14850000 32152000 40006000 10108000 31379000 86066000 52435 427;1442 47089 440265;440266;440267;440268;440269;440270;440271;440272;440273;440274;440275;440276;440277;440278;440279 348198;348199;348200;348201;348202;348203;348204;348205;348206;348207;348208;348209;348210;348211;348212;348213;348214 348205 17 TLTTVQGIADDYDKK Unmodified 1666.8414 0.84138068 427;1442 O60739;P41567 EIF1B;EIF1 Eukaryotic translation initiation factor 1b;Eukaryotic translation initiation factor 1 no no 0 0 1 By MS/MS 2.5 0.5 1 1 2 64.645 59.313 3 0.0020064 76200 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 42.947 39.106 116170000 0 116170000 0 0 0 0 0 0 0 0 0 0 0 0 0 52436 427;1442 47090 440280;440281 348215;348216;348217 348215 3 TLTVLHPLK Unmodified 1020.6332 0.63316622 3720 Q969M3 YIPF5 Protein YIPF5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 53.88 53.373 2 0.0085848 59612 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 69.198 57.004 80278000 13234000 0 0 4349300 2748800 5598100 4841900 4405700 5934000 4622600 5952800 8208500 6694500 6848200 6839900 52437 3720 47091 440282;440283;440284;440285;440286;440287;440288;440289;440290;440291;440292;440293;440294 348218;348219;348220;348221;348222;348223;348224;348225;348226;348227;348228;348229 348224 12 TLVAGTIWNLK Unmodified 1214.7023 0.70230842 3100 Q7Z4Q2 HEATR3 HEAT repeat-containing protein 3 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 83.935 82.918 2 0.0046487 105748 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.502 61.413 29353000 7367900 0 0 1607700 2773900 4380100 1692000 2530500 0 4076000 0 4925300 0 0 0 52438 3100 47092 440295;440296;440297;440298;440299;440300;440301;440302 348230;348231 348230 2 TLVAHYPPVQVLFEK Unmodified 1739.961 0.9610423 1694 P52701 MSH6 DNA mismatch repair protein Msh6 yes yes 0 0 0 By MS/MS 10 0 1 1 83.815 84.005 3 0.0072908 96742 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.993 28.869 7913400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7913400 52439 1694 47093 440303 348232 348232 1 TLVAVKPDGVQR Unmodified 1281.7405 0.74048484 177 O00746 NME4 Nucleoside diphosphate kinase, mitochondrial yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 2 1 2 1 39.005 39.203 2;3 0.015628 42804 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 43.991 30.855 73022000 0 0 0 0 1415100 7180800 1873000 15545000 0 9210600 16492000 21305000 0 0 0 52440 177 47094 440304;440305;440306;440307;440308;440309;440310;440311;440312 348233;348234;348235;348236 348236 0 TLVDIAK Unmodified 758.4538 0.45380487 4065 Q99832 CCT7 T-complex protein 1 subunit eta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 43.559 42.749 2 0.025177 46694 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 81.297 16.52 7987700000 0 4846100000 115600000 187900000 134750000 236890000 197750000 174290000 176370000 250240000 365960000 368990000 301650000 209950000 421270000 52441 4065 47095 440313;440314;440315;440316;440317;440318;440319;440320;440321;440322;440323;440324;440325;440326;440327 348237;348238;348239;348240;348241;348242;348243;348244;348245;348246;348247;348248;348249 348244 13 TLVEDLFADK Unmodified 1149.5918 0.59175492 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 82.303 82.36 2 0.024199 95324 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 53.751 27.149 188600000 0 0 0 3960400 8054400 14749000 9113300 14070000 11640000 18313000 14686000 21236000 15057000 0 57717000 52442 528 47096 440328;440329;440330;440331;440332;440333;440334;440335;440336;440337;440338 348250 348250 1 TLVFEQR Unmodified 891.48142 0.48141661 5147 Q9Y3A6 TMED5 Transmembrane emp24 domain-containing protein 5 yes yes 0 0 0 By MS/MS 10 0 1 1 42.957 43.7 2 0.039143 47791 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.176 27.523 23470000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23470000 52443 5147 47097 440339 348251 348251 1 TLVGSGVEELPSNILLVR Unmodified 1895.0728 0.072777598 3112 Q7Z6J0 SH3RF1 E3 ubiquitin-protein ligase SH3RF1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 91.704 91.857 2 0.0010257 106659 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 61.038 43.229 5294000 0 0 0 0 0 0 0 0 0 1679500 1448400 0 0 0 2166100 52444 3112 47098 440340;440341;440342 348252;348253;348254;348255 348253 4 TLVIIEK Unmodified 814.51641 0.51640513 3133 Q86TB9 PATL1 Protein PAT1 homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.671 51.82 2 0.030034 58355 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 75.109 8.0772 696110000 0 0 0 42094000 48934000 50283000 48986000 56783000 46870000 65548000 67302000 90451000 59515000 58614000 60728000 52445 3133 47099 440343;440344;440345;440346;440347;440348;440349;440350;440351;440352;440353;440354 348256;348257;348258;348259 348257 4 TLVLLMGK Unmodified 873.53576 0.53576037 846 P07737;CON__P02584 PFN1 Profilin-1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 4 16 2 1 1 1 1 1 1 1 1 1 2 2 1 2 2 76.214 75.12 1;2 0.013529 86221 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 72.138 57.725 4254800000 2238900000 168180000 725570000 17859000 12477000 19099000 24473000 23078000 14266000 32423000 139340000 128100000 22758000 105270000 583010000 52446 846 47100 440355;440356;440357;440358;440359;440360;440361;440362;440363;440364;440365;440366;440367;440368;440369;440370;440371;440372;440373;440374 348260;348261;348262;348263;348264;348265;348266;348267;348268;348269;348270;348271;348272;348273;348274;348275;348276 348274 14 TLVLLMGK Oxidation (M) 889.53067 0.53067499 846 P07737;CON__P02584 PFN1 Profilin-1 yes no 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 61.16 59.986 1;2 0.0018205 81886 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 138.24 109.99 856130000 58214000 28663000 0 21805000 1279500 20903000 36822000 24794000 17510000 33670000 134380000 124690000 31285000 85494000 236620000 52447 846 47100 440375;440376;440377;440378;440379;440380;440381;440382;440383;440384;440385;440386;440387;440388;440389 348277;348278;348279;348280;348281;348282 348279 1050 4 TLVLSNLSYSATEETLQEVFEK Unmodified 2500.2585 0.2584657 1085 P19338 NCL Nucleolin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.29 0.452 5 2 3 3 1 98.57 93.568 2;3 2.7565E-142 117621 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 212.85 200.31 556680000 354750000 188470000 13459000 0 0 0 0 0 0 0 0 0 0 0 0 52448 1085 47101 440390;440391;440392;440393;440394;440395;440396 348283;348284;348285;348286;348287;348288;348289;348290;348291 348289 8 TLVLSSSPTSPTQEPLPGGK Unmodified 1995.0524 0.052436086 3959 Q96QF0 RAB3IP Rab-3A-interacting protein yes yes 0 0 0 By MS/MS 2 0 1 1 75.062 70.121 2 2.5704E-17 87824 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.76 106.88 18554000 0 18554000 0 0 0 0 0 0 0 0 0 0 0 0 0 52449 3959 47102 440397 348292 348292 1 TLVNKEEPPK Unmodified 1153.6343 0.63428844 4243 Q9BY77 POLDIP3 Polymerase delta-interacting protein 3 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 17.603 17.918 3 0.025992 18540 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 48.44 36.226 32720000 0 0 0 0 0 0 5042000 0 1412300 3465600 6690800 6711500 0 4271100 5126300 52450 4243 47103 440398;440399;440400;440401;440402;440403;440404 348293 348293 0 TLVNPANVTFK Unmodified 1202.6659 0.66592292 524 O75608 LYPLA1 Acyl-protein thioesterase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 70.418 69.052 2 3.1966E-05 90145 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 116.3 89.05 4309400000 1283900000 2428300000 55761000 38844000 21230000 76772000 33923000 28258000 17541000 57972000 52163000 52374000 31794000 47683000 82944000 52451 524 47104 440405;440406;440407;440408;440409;440410;440411;440412;440413;440414;440415;440416;440417;440418;440419;440420;440421 348294;348295;348296;348297;348298;348299;348300;348301;348302;348303;348304;348305 348299 4 TLVNVVK Unmodified 771.48544 0.48543935 1241 P29083 GTF2E1 General transcription factor IIE subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 38.617 39.005 2 0.039014 41939 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.234 11.781 19751000 0 0 0 0 0 0 0 0 3009300 0 0 0 0 5077000 11664000 52452 1241 47105 440422;440423;440424 348306;348307;348308 348306 3 TLVPGPPGSSRPVK Unmodified 1390.7932 0.79324869 2402 Q14318 FKBP8 Peptidyl-prolyl cis-trans isomerase FKBP8 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.706 41.882 3 0.00084717 46876 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 55.213 39.674 204700000 0 0 0 10557000 11115000 11068000 15786000 12369000 12377000 21938000 22489000 25026000 23089000 15439000 23444000 52453 2402 47106 440425;440426;440427;440428;440429;440430;440431;440432;440433;440434;440435;440436 348309;348310;348311;348312;348313;348314;348315;348316;348317;348318;348319;348320;348321 348309 12 TLVPHYCELVGANPK Unmodified 1696.8607 0.86067633 3907 Q96KG9 SCYL1 N-terminal kinase-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.8 3.92 6 9 2 2 2 1 1 1 1 1 1 2 1 68.69 66.528 2;3 3.1021E-15 88607 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 127.71 116.67 700840000 493890000 114890000 30086000 3159100 0 0 4342200 0 5498100 8673500 0 8653300 7229900 11576000 12847000 52454 3907 47107 440437;440438;440439;440440;440441;440442;440443;440444;440445;440446;440447;440448;440449;440450;440451 348322;348323;348324;348325;348326;348327;348328;348329;348330;348331;348332;348333;348334;348335 348329 12 TLVQILTEPR Unmodified 1168.6816 0.68157298 573 O76031 CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 78.577 78.721 2 0.0066244 90831 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 73.985 60.215 111930000 0 0 0 0 0 11198000 8126100 11381000 10961000 13827000 12652000 10282000 9258300 9175400 15066000 52455 573 47108 440452;440453;440454;440455;440456;440457;440458;440459;440460;440461 348336;348337;348338;348339;348340;348341;348342;348343;348344;348345;348346 348343 11 TLVSAVPEESEMDPHVR Unmodified 1894.9095 0.90947702 3933 Q96N67 DOCK7 Dedicator of cytokinesis protein 7 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 65.176 65.434 3 0.041437 75083 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 13.959 7.3889 6787800 0 0 0 0 0 3303300 0 0 0 0 0 0 0 0 3484500 52456 3933 47109 440462;440463 348347 348347 1 TLVSMPPLPGLDLK Oxidation (M) 1495.832 0.83200197 1536 P48382 RFX5 DNA-binding protein RFX5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 85.6 85.693 2 1.1415E-19 99696 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 137.17 127.48 193610000 0 0 0 5992200 0 15475000 15730000 19702000 13636000 23521000 20889000 23749000 16140000 15758000 23019000 52457 1536 47110 440464;440465;440466;440467;440468;440469;440470;440471;440472;440473;440474 348348;348349;348350;348351;348352;348353;348354;348355;348356;348357;348358;348359;348360;348361 348357 2443 14 TLVSVTK Unmodified 746.4538 0.45380487 850;2717 P07900;Q58FG1 HSP90AA1;HSP90AA4P Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A4 no no 0 0 0 By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.341 27.539 1 0.048401 28947 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 128.57 29.427 614270000 0 0 0 24831000 17570000 65365000 34061000 22882000 21197000 51115000 73247000 69569000 47849000 53613000 132970000 52458 850;2717 47111 440475;440476;440477;440478;440479;440480;440481;440482;440483;440484;440485;440486 348362 348362 0 TLVTGALR Unmodified 829.50215 0.50215205 4211 Q9BWH6 RPAP1 RNA polymerase II-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 27.658 27.717 2 0.015124 29531 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 69.383 19.794 186900000 0 0 0 13165000 18570000 21282000 21677000 18468000 17066000 20248000 0 0 26553000 29874000 0 52459 4211 47112 440487;440488;440489;440490;440491;440492;440493;440494;440495;440496 348363;348364;348365;348366;348367;348368;348369;348370 348367 8 TLVTRTQGTK Unmodified 1103.6299 0.62987176 1842 P61247 RPS3A 40S ribosomal protein S3a yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 13.76 10.089 2 0.033081 15356 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.716 62.362 370200000 361150000 9046700 0 0 0 0 0 0 0 0 0 0 0 0 0 52460 1842 47113 440497;440498 348371 348371 1 TLVVHEK Unmodified 824.4756 0.47560295 725 P00441 SOD1 Superoxide dismutase [Cu-Zn] yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 12.211 11.582 2 0.030693 14390 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 92.187 65.02 2938900000 1311900000 128720000 1321600000 3333100 0 2584400 4693800 4167500 2465300 2305300 10391000 0 660720 33531000 112550000 52461 725 47114 440499;440500;440501;440502;440503;440504;440505;440506;440507;440508;440509;440510;440511 348372;348373 348372 2 TLVVQDEPVGGDTPASFTPYSTATGQTPLAPEVGGAENK Unmodified 3900.8905 0.8905223 3061 Q7LBC6 KDM3B Lysine-specific demethylase 3B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 2 1 1 2 2 2 2 2 1 2 2 86.458 86.567 3;4 3.3954E-139 100147 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 123.01 121.42 356010000 0 0 0 0 26155000 9920300 6236000 31909000 18153000 72140000 52019000 47005000 5109100 26450000 60910000 52462 3061 47115 440512;440513;440514;440515;440516;440517;440518;440519;440520;440521;440522;440523;440524;440525;440526;440527;440528;440529;440530 348374;348375;348376;348377;348378;348379;348380;348381;348382;348383;348384;348385;348386;348387;348388;348389;348390;348391 348379 17 TLWGDYYINMK Unmodified 1402.6591 0.65912298 3076 Q7Z2Z2 EFTUD1 Elongation factor Tu GTP-binding domain-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 89.008 80.877 2 0.0047474 105211 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.934 66.358 6478100 6478100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52463 3076 47116 440531 348392 348392 1 TLWNGQK Unmodified 845.43955 0.43955179 2055 Q01518 CAP1 Adenylyl cyclase-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS 7.33 3.77 3 6 1 1 1 1 1 1 1 1 1 32.233 30.807 2 0.02376 32959 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 93.593 54.572 719010000 387790000 173900000 50356000 16067000 0 0 10881000 9050300 0 0 15347000 18081000 0 0 37527000 52464 2055 47117 440532;440533;440534;440535;440536;440537;440538;440539;440540 348393;348394 348394 2 TLWNQELYIQQDNSERK Unmodified 2164.0549 0.054895702 3686 Q92917 GPKOW G patch domain and KOW motifs-containing protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 72.414 71.575 3 5.1987E-05 82244 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 70.584 64.149 126570000 20659000 0 4144500 0 0 8540800 0 7652300 6288300 10070000 14661000 11624000 8769200 7081400 27085000 52465 3686 47118 440541;440542;440543;440544;440545;440546;440547;440548;440549;440550;440551 348395;348396;348397;348398;348399;348400;348401;348402;348403;348404;348405 348405 11 TLYDESCSK Unmodified 1101.4648 0.46483985 3727 Q969U7 PSMG2 Proteasome assembly chaperone 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 19.799 19.234 2 0.0081041 23204 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.064 78.016 222530000 13271000 177570000 0 0 924140 0 1230700 1592400 0 3121300 4245300 5154500 1780600 4450300 9186600 52466 3727 47119 440552;440553;440554;440555;440556;440557;440558;440559;440560;440561;440562 348406;348407;348408 348407 3 TLYDFPGNDAEDLPFK Unmodified 1840.8519 0.85194536 1500 P46109 CRKL Crk-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 87 86.506 2 1.303E-10 106731 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.84 93.213 100760000 0 49109000 0 0 0 1422800 0 3191000 0 4590100 8297800 8097800 0 4174800 21881000 52467 1500 47120 440563;440564;440565;440566;440567;440568;440569;440570 348409;348410;348411;348412;348413;348414;348415;348416 348411 8 TLYEHYSGGESHNSSSSK Unmodified 1968.845 0.84496251 1331 P33981 TTK Dual specificity protein kinase TTK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 4 14 2 2 2 2 2 1 2 1 1 1 1 1 18.685 17.911 3;4 3.772E-27 26335 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 108.75 106.65 270580000 68292000 0 10649000 18211000 21606000 22263000 16083000 0 26365000 0 14335000 28221000 17158000 11389000 16007000 52468 1331 47121 440571;440572;440573;440574;440575;440576;440577;440578;440579;440580;440581;440582;440583;440584;440585;440586;440587;440588 348417;348418;348419;348420;348421;348422;348423;348424;348425;348426 348419 8 TLYFADTYLK Unmodified 1233.6281 0.62814043 2920 Q6P1M3 LLGL2 Lethal(2) giant larvae protein homolog 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 79.603 79.579 2 0.028516 91861 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 43.635 32.145 12877000 0 0 0 0 1191000 5109500 0 0 0 5582200 0 0 994720 0 0 52469 2920 47122 440589;440590;440591;440592 348427;348428 348427 2 TLYFLPR Unmodified 908.51199 0.51198846 895 P09884 POLA1 DNA polymerase alpha catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.018 76.13 2 0.045927 87876 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.138 41.194 189540000 0 0 0 0 8591700 14534000 11800000 14446000 11999000 17795000 22421000 27610000 11198000 12715000 36435000 52470 895 47123 440593;440594;440595;440596;440597;440598;440599;440600;440601;440602;440603 348429 348429 1 TLYGFGG Unmodified 713.33844 0.33844077 1910 P62805 HIST1H4A Histone H4 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.111 64.203 1 0.047574 73501 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 126.25 126.25 669310000 0 0 0 62535000 42291000 44086000 47294000 44439000 36964000 59300000 66529000 74022000 85373000 40521000 65957000 52471 1910 47124 440604;440605;440606;440607;440608;440609;440610;440611;440612;440613;440614;440615 348430;348431;348432 348430 0 TLYHSVHEK Unmodified 1112.5615 0.56145784 669 O95571 ETHE1 Persulfide dioxygenase ETHE1, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 15.029 10.98 2 0.0075483 16245 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.635 49.074 16813000 16813000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52472 669 47125 440616 348433 348433 1 TLYLTLK Unmodified 850.51641 0.51640513 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 66.181 66.335 2 0.034771 75049 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.134 71.134 45812000 0 0 0 0 2615600 3655000 3597100 3269800 3042100 4978600 3914800 4666700 4635200 4239800 7197600 52473 5189 47126 440617;440618;440619;440620;440621;440622;440623;440624;440625;440626;440627 348434;348435;348436;348437 348435 4 TLYNNQPIDFLK Unmodified 1464.7613 0.76127986 2348 Q13867 BLMH Bleomycin hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 82.308 81.191 2 8.3058E-15 101291 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145.89 122.57 1209100000 40080000 567050000 14311000 151970000 17177000 40617000 21741000 52342000 18913000 60804000 32705000 66735000 26921000 31445000 66339000 52474 2348 47127 440628;440629;440630;440631;440632;440633;440634;440635;440636;440637;440638;440639;440640;440641;440642;440643 348438;348439;348440;348441;348442;348443;348444;348445;348446;348447;348448;348449;348450;348451;348452;348453;348454 348441 17 TLYNNQPIDFLKK Unmodified 1592.8562 0.85624288 2348 Q13867 BLMH Bleomycin hydrolase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 73.836 73.765 3 0.0011468 84901 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 53.136 41.765 32094000 0 0 0 13916000 0 0 3518300 14659000 0 0 0 0 0 0 0 52475 2348 47128 440644;440645;440646 348455;348456 348455 1 TLYPLLIK Unmodified 959.60555 0.60555449 3691 Q92966 SNAPC3 snRNA-activating protein complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.735 80.795 2 0.020013 93433 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 63.148 53.01 45828000 0 0 0 1132900 3359300 3289000 2515800 4257400 3349600 4814500 4380700 5344300 3594100 3535300 6254800 52476 3691 47129 440647;440648;440649;440650;440651;440652;440653;440654;440655;440656;440657;440658 348457;348458;348459;348460;348461;348462;348463;348464;348465;348466;348467 348457 11 TLYVGNLSR Unmodified 1021.5556 0.55564418 2048;1302 P31483;Q01085 TIA1;TIAL1 Nucleolysin TIA-1 isoform p40;Nucleolysin TIAR no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.314 51.463 2 0.0052017 58187 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 80.455 53.762 231380000 0 0 0 9808100 10414000 19305000 15114000 16436000 12085000 22062000 28070000 19450000 19086000 17446000 42107000 52477 1302;2048 47130 440659;440660;440661;440662;440663;440664;440665;440666;440667;440668;440669;440670 348468;348469;348470;348471 348471 4 TMALPVGR Unmodified 843.46366 0.46365805 4345 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 yes yes 0 0 0 By MS/MS 10 0 1 1 49.106 49.541 2 0.026089 55834 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 58.167 45.179 6465000 0 0 0 0 0 0 0 0 0 0 6465000 0 0 0 0 52478 4345 47131 440671 348472 348472 1 TMAPVAS Oxidation (M) 691.32108 0.32107614 1348 P35250 RFC2 Replication factor C subunit 2 yes yes 0 1 0 By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 14.246 14.384 1 0.02548 14039 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 54.525 54.525 26111000 0 0 0 1604400 1692500 2142000 1956000 1866500 1679100 3201800 3397100 2958900 3331800 2280500 0 52479 1348 47132 440672;440673;440674;440675;440676;440677;440678;440679;440680;440681;440682 348473;348474;348475;348476 348474 0 TMAQHEELMK 2 Oxidation (M) 1248.5479 0.54785797 965 P12270 TPR Nucleoprotein TPR yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 6.83 3.76 3 2 7 1 2 2 1 1 1 1 1 1 1 8.5077 7.2863 2;3 0.0072483 9351 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.014 45.29 137800000 501950 40264000 38784000 3547100 5170900 7041300 9263700 5231400 0 0 0 14520000 13478000 0 0 52480 965 47133 440683;440684;440685;440686;440687;440688;440689;440690;440691;440692;440693;440694 348477;348478;348479;348480 348477 1271;1272 4 TMAQHEELMK Unmodified 1216.558 0.55802872 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 23.759 23.719 2;3 6.1006E-05 31352 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 160.53 88.839 189580000 0 0 22576000 0 7653500 8272100 8761900 7732800 5755900 17977000 16792000 25691000 12966000 17079000 38319000 52481 965 47133 440695;440696;440697;440698;440699;440700;440701;440702;440703;440704;440705;440706 348481;348482 348481 0 TMATMGDTLASR 2 Oxidation (M) 1285.5642 0.56423631 242 O15027 SEC16A Protein transport protein Sec16A yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 19.174 19.218 2 0.0026199 19820 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 49.35 37.503 12269000 0 0 0 2492400 2431600 2512600 0 0 0 0 0 4832200 0 0 0 52482 242 47134 440707;440708;440709;440710 348483;348484;348485 348483 330;331 3 TMATMGDTLASR Unmodified 1253.5744 0.57440707 242 O15027 SEC16A Protein transport protein Sec16A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 47.185 47.306 2 6.4874E-08 52066 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 118.4 88.149 44976000 0 0 0 3375800 4255100 0 0 4393500 0 5856900 6467000 0 5788900 4866800 9972100 52483 242 47134 440711;440712;440713;440714;440715;440716;440717;440718;440719 348486;348487;348488;348489;348490;348491;348492;348493;348494 348488 9 TMATMGDTLASR Oxidation (M) 1269.5693 0.56932169 242 O15027 SEC16A Protein transport protein Sec16A yes yes 0 1 0 By MS/MS 10 0 1 1 34.185 34.492 2 0.011067 37011 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 42.336 29.299 2749600 0 0 0 0 0 0 0 0 0 0 0 0 0 2749600 0 52484 242 47134 440720 348495 348495 330;331 1 TMCLTEDK Unmodified 996.42562 0.42561757 3182 Q86WB0 ZC3HC1 Nuclear-interacting partner of ALK yes yes 0 0 0 By MS/MS 2 0 1 1 28.979 24.632 2 0.019241 32307 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.251 53.149 85672000 0 85672000 0 0 0 0 0 0 0 0 0 0 0 0 0 52485 3182 47135 440721 348496 348496 1 TMDILASLATSVDK Oxidation (M) 1479.7491 0.7490602 4126 Q9BSJ2 TUBGCP2 Gamma-tubulin complex component 2 yes yes 0 1 0 By MS/MS 10 0 1 1 85.243 85.411 2 0.014597 98682 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.5 31.189 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52486 4126 47136 440722 348497 348497 5611 1 TMDLPFLEASTLR Oxidation (M) 1508.7545 0.75447993 1083 P19174 PLCG1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 85.519 85.656 2 0.0007845 99016 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.439 56.214 8348300 0 0 0 0 0 0 0 0 0 0 0 0 0 2800500 5547800 52487 1083 47137 440723;440724 348498 348498 1559 1 TMDNMTSSAQIIQR Unmodified 1594.7443 0.74432595 5223 Q9Y580 RBM7 RNA-binding protein 7 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 55.846 56.276 2 0.0066284 63137 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.836 45.26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52488 5223 47138 440725;440726 348499;348500 348499 2 TMDVIAEGDPGFK Unmodified 1378.6439 0.64386684 4616 Q9NRY5 FAM114A2 Protein FAM114A2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 67.679 67.285 2 0.00045173 77112 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 79.693 74.152 227650000 0 98556000 0 6666700 5882100 6184800 9077300 10971000 0 11455000 12808000 10198000 16486000 12767000 26601000 52489 4616 47139 440727;440728;440729;440730;440731;440732;440733;440734;440735;440736;440737;440738 348501;348502;348503;348504;348505;348506;348507;348508;348509;348510;348511;348512;348513 348507 13 TMDVIAEGDPGFK Oxidation (M) 1394.6388 0.63878147 4616 Q9NRY5 FAM114A2 Protein FAM114A2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 2 1 1 1 1 54.825 53.797 2 0.0012239 62268 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 61.344 43.524 93616000 0 44905000 0 11913000 6695900 0 0 8962800 0 0 7422800 0 13717000 0 0 52490 4616 47139 440739;440740;440741;440742;440743;440744;440745;440746;440747;440748;440749 348514;348515;348516;348517;348518;348519;348520;348521;348522;348523;348524 348523 6017 8 TMEDTLMTVK 2 Oxidation (M) 1199.5414 0.54137561 1711 P53365 ARFIP2 Arfaptin-2 yes yes 0 2 0 By MS/MS 10 0 1 1 28.014 28.018 2 0.031203 30289 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 48.423 22.529 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52491 1711 47140 440750 348525 348525 2767 1 TMEDTLMTVK Oxidation (M) 1183.5465 0.54646099 1711 P53365 ARFIP2 Arfaptin-2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 43.895 43.672 2 0.0061845 49326 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 57.859 37.234 5185900 0 0 0 0 2154900 0 3031000 0 0 0 0 0 0 0 0 52492 1711 47140 440751;440752;440753;440754;440755 348526;348527;348528;348529;348530 348530 2767 5 TMEIYSK Unmodified 870.4157 0.41570481 1348 P35250 RFC2 Replication factor C subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.595 28.79 2 0.023967 30632 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 83.753 51.687 293330000 0 0 0 25641000 16972000 24682000 19518000 29596000 17953000 27581000 31049000 37125000 22098000 17443000 23668000 52493 1348 47141 440756;440757;440758;440759;440760;440761;440762;440763;440764;440765;440766;440767 348531;348532;348533;348534;348535;348536;348537;348538 348537 8 TMELAAQSMK Unmodified 1108.5257 0.52566596 4241 Q9BY43 CHMP4A Charged multivesicular body protein 4a yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 4 1 1 2 41.625 42.277 2 0.023723 46164 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.213 57.61 26276000 0 0 0 0 0 0 0 0 0 0 6914900 9815800 0 0 9545100 52494 4241 47142 440768;440769;440770;440771 348539;348540;348541 348540 1 TMELNVGNEASFHGQER Oxidation (M) 1933.8588 0.85883843 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 44.839 45.246 3 0.00019992 50727 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 55.437 38.771 48057000 0 0 0 0 0 0 0 5322900 4797700 0 7519200 6344300 11418000 7005200 5650400 52495 2804 47143 440772;440773;440774;440775;440776;440777;440778 348542;348543;348544;348545;348546 348542 4436 5 TMELNVGNEASFHGQERTK Oxidation (M) 2163.0015 0.0014799231 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 1 1 By MS/MS 2 0 1 1 43.804 40.033 4 0.00082558 50378 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 47.082 43.843 4944800 0 0 4944800 0 0 0 0 0 0 0 0 0 0 0 0 52496 2804 47144 440779 348547 348547 4436 1 TMENVDSLDK Unmodified 1150.5176 0.5176037 3994 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.255 35.437 2 0.0015191 39071 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 92.838 78.164 177210000 0 0 0 6008500 8158300 11877000 12043000 8081800 14434000 19299000 16518000 18299000 14481000 19853000 28156000 52497 3994 47145 440780;440781;440782;440783;440784;440785;440786;440787;440788;440789;440790;440791 348548;348549;348550;348551;348552;348553;348554;348555;348556;348557 348552 9 TMENVDSLDK Oxidation (M) 1166.5125 0.51251832 3994 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 24.088 23.616 2 0.0048029 24282 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 62.823 53.96 73299000 3760000 0 0 0 6655400 9013500 7745900 9077800 6807500 9809000 0 10872000 0 9558100 0 52498 3994 47145 440792;440793;440794;440795;440796;440797;440798;440799;440800 348558;348559;348560;348561;348562;348563 348562 5475 5 TMEPEEEVEDDPK Oxidation (M) 1562.6294 0.62939857 255 O15119 TBX3 T-box transcription factor TBX3 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 28.896 29.067 2 7.5864E-07 30915 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 92.611 89.003 112400000 0 0 0 10785000 6586200 11339000 9999400 0 9673600 13794000 0 15079000 9771800 10333000 15041000 52499 255 47146 440801;440802;440803;440804;440805;440806;440807;440808;440809;440810;440811 348564;348565;348566;348567;348568;348569;348570;348571;348572;348573 348572 340 10 TMEPEEEVEDDPK Unmodified 1546.6345 0.63448395 255 O15119 TBX3 T-box transcription factor TBX3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.274 38.454 2 5.1458E-13 41449 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 136.02 135.12 178520000 0 0 0 8581700 9008600 13368000 10341000 12714000 10361000 16870000 24226000 20037000 15159000 16152000 21701000 52500 255 47146 440812;440813;440814;440815;440816;440817;440818;440819;440820;440821;440822;440823 348574;348575;348576;348577;348578;348579;348580;348581;348582;348583;348584;348585 348581 12 TMESGLEAEK Unmodified 1093.4961 0.49613997 3459 Q8NHQ8 RASSF8 Ras association domain-containing protein 8 yes yes 0 0 0 By MS/MS 10 0 1 1 25.465 26.14 2 0.030285 26905 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.083 28.218 2846500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2846500 52501 3459 47147 440824 348586;348587 348586 2 TMFAQVESDDEEAK Oxidation (M) 1614.6719 0.67193209 4693 Q9NW82 WDR70 WD repeat-containing protein 70 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.15 2.41 2 1 24 3 2 2 2 2 2 2 2 2 2 2 2 2 38.032 37.644 2 4.734E-15 46976 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.39 105.18 157660000 0 51120000 0 6549000 4719300 7268800 6700400 6700600 6474800 10910000 10346000 10655000 13156000 7205600 15849000 52502 4693 47148 440825;440826;440827;440828;440829;440830;440831;440832;440833;440834;440835;440836;440837;440838;440839;440840;440841;440842;440843;440844;440845;440846;440847;440848;440849;440850;440851 348588;348589;348590;348591;348592;348593;348594;348595;348596;348597;348598;348599;348600;348601;348602;348603;348604;348605;348606;348607;348608;348609 348594 6096 16 TMFAQVESDDEEAK Unmodified 1598.677 0.67701747 4693 Q9NW82 WDR70 WD repeat-containing protein 70 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 52.782 51.155 2 1.0061E-43 65022 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 213.35 196.71 302280000 5482900 203500000 0 0 6137500 8669100 8833400 10646000 5754900 11231000 0 0 0 14287000 27736000 52503 4693 47148 440852;440853;440854;440855;440856;440857;440858;440859;440860;440861;440862;440863;440864;440865;440866 348610;348611;348612;348613;348614;348615;348616;348617;348618;348619;348620;348621;348622;348623;348624;348625 348613 16 TMFENVTR Acetyl (Protein N-term);Oxidation (M) 1054.4753 0.47534495 3954 Q96QA5 GSDMA Gasdermin-A yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 8 2 1 1 1 1 1 1 53.507 53.497 2 0.0033214 60893 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 58.815 42.26 139000000 0 0 0 76571000 10380000 8696200 0 8225500 0 0 0 21123000 0 7560100 6447600 52504 3954 47149 440867;440868;440869;440870;440871;440872;440873;440874 348626;348627;348628;348629;348630 348626 5441 4 TMFENVTR Acetyl (Protein N-term) 1038.4804 0.48043033 3954 Q96QA5 GSDMA Gasdermin-A yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 73.745 73.759 2 0.0023914 84922 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 89.752 75.083 134360000 0 0 0 47983000 6150700 6066900 8335300 9313200 0 12789000 11153000 22267000 10307000 0 0 52505 3954 47149 440875;440876;440877;440878;440879;440880;440881;440882;440883 348631;348632;348633;348634;348635;348636;348637 348635 7 TMFHPSEK Unmodified 975.4484 0.44840192 2996 Q6YHU6 THADA Thyroid adenoma-associated protein yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 23.646 19.674 2 0.014369 27885 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.909 54.407 24246000 23121000 0 1125400 0 0 0 0 0 0 0 0 0 0 0 0 52506 2996 47150 440884;440885 348638 348638 1 TMFLPLAER Oxidation (M) 1092.5638 0.56376603 2465 Q14CX7 NAA25 N-alpha-acetyltransferase 25, NatB auxiliary subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 70.141 70.35 2 0.0028263 80952 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 87.308 76.893 1575000000 0 0 0 0 0 0 511570000 397160000 568380000 23800000 30305000 43763000 0 0 0 52507 2465 47151 440886;440887;440888;440889;440890;440891 348639;348640;348641;348642;348643;348644;348645;348646;348647;348648 348643 4063 10 TMFLPLAER Unmodified 1076.5689 0.56885141 2465 Q14CX7 NAA25 N-alpha-acetyltransferase 25, NatB auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 79.975 80.154 2 0.005264 92394 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 78.516 68.735 722860000 0 0 0 0 0 0 181320000 292520000 211650000 0 15615000 21767000 0 0 0 52508 2465 47151 440892;440893;440894;440895;440896 348649;348650;348651;348652;348653 348649 5 TMGFCYQILTEPNADPRK Oxidation (M) 2156.0031 0.0030598275 649 O95373 IPO7 Importin-7 yes yes 0 1 1 By MS/MS 2 0 1 1 80.462 72.331 3 0.00099032 94920 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.608 40.991 18145000 18145000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52509 649 47152 440897 348654 348654 794 1 TMGFCYQILTEPNADPRK Unmodified 2140.0081 0.0081452054 649 O95373 IPO7 Importin-7 yes yes 0 0 1 By MS/MS 2 0 1 1 85.212 77.082 3 0.0052207 100650 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 38.271 29.339 17652000 17652000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52510 649 47152 440898 348655 348655 1 TMGMVDIFNGDADLSGMTGSR 3 Oxidation (M) 2221.929 0.92896819 1251 P29508 SERPINB3 Serpin B3 yes yes 0 3 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 2 2 1 2 1 1 1 74.115 74.031 2;3 2.8246E-53 85507 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 118.13 118.13 93686000 0 0 0 56107000 8758900 0 0 3104400 0 12853000 4799400 5692000 0 2371200 0 52511 1251 47153 440899;440900;440901;440902;440903;440904;440905;440906;440907;440908 348656;348657;348658;348659;348660 348659 1850;1851;1852 5 TMGMVDIFNGDADLSGMTGSR 2 Oxidation (M) 2205.9341 0.93405356 1251 P29508 SERPINB3 Serpin B3 yes yes 0 2 0 By MS/MS 10 0 1 1 81.396 80.977 2 1.5862E-47 94011 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 111.74 111.74 4570100 0 0 0 4570100 0 0 0 0 0 0 0 0 0 0 0 52512 1251 47153 440909 348661;348662 348662 1850;1851;1852 2 TMGVMFTPLTVK 2 Oxidation (M) 1355.6829 0.68289489 141 O00303 EIF3F Eukaryotic translation initiation factor 3 subunit F yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 2 1 1 1 2 72.683 72.873 2 0.0010005 84108 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 61.344 52.161 103810000 0 0 0 0 0 0 10321000 26324000 8404900 0 18062000 23202000 0 17501000 0 52513 141 47154 440910;440911;440912;440913;440914;440915;440916;440917 348663;348664;348665;348666;348667 348667 192;193 2 TMGVMFTPLTVK Unmodified 1323.6931 0.69306564 141 O00303 EIF3F Eukaryotic translation initiation factor 3 subunit F yes yes 0 0 0 By MS/MS 10 0 1 1 84.659 84.837 2 0.0017198 97918 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.655 68.021 8744800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8744800 52514 141 47154 440918 348668 348668 1 TMGVMFTPLTVK Oxidation (M) 1339.688 0.68798027 141 O00303 EIF3F Eukaryotic translation initiation factor 3 subunit F yes yes 0 1 0 By MS/MS 10 0 1 1 79.093 79.265 2 0.0050956 91760 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 49.777 30.423 22882000 0 0 0 0 0 0 0 0 0 0 0 22882000 0 0 0 52515 141 47154 440919 348669 348669 192;193 1 TMGYSQEIVEK Unmodified 1283.6068 0.60675306 454 O75113 N4BP1 NEDD4-binding protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 49.247 43.6 2 0.0049383 56628 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.533 39.977 16153000 0 16153000 0 0 0 0 0 0 0 0 0 0 0 0 0 52516 454 47155 440920 348670 348670 1 TMGYSVTAPEDTR Unmodified 1426.6398 0.6398441 272 O15305 PMM2 Phosphomannomutase 2 yes yes 0 0 0 By MS/MS 10 0 1 1 45.88 46.617 2 0.0018578 51349 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.344 35.405 6227900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6227900 52517 272 47156 440921 348671 348671 1 TMGYSVTAPEDTRR Unmodified 1582.741 0.74095513 272 O15305 PMM2 Phosphomannomutase 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 39.603 39.974 3 4.713E-12 43377 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.649 70.082 61763000 0 0 0 0 0 0 2952200 0 2496600 5164700 11899000 11889000 0 7188500 20174000 52518 272 47157 440922;440923;440924;440925;440926;440927;440928;440929 348672;348673;348674;348675;348676;348677;348678;348679;348680 348674 9 TMGYSVTAPEDTRR Oxidation (M) 1598.7359 0.73586975 272 O15305 PMM2 Phosphomannomutase 2 yes yes 0 1 1 By MS/MS 10 0 1 1 30.856 31.565 3 0.017507 33295 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.801 34.364 13104000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13104000 52519 272 47157 440930 348681 348681 360 0 TMHFGTPTAYEK Unmodified 1381.6336 0.63363651 4578 Q9NQW7 XPNPEP1 Xaa-Pro aminopeptidase 1 yes yes 0 0 0 By MS/MS 2 0 1 1 56.176 48.028 3 0.019485 65448 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 35.077 26.187 61105000 61105000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52520 4578 47158 440931 348682 348682 1 TMHFGTPTAYEK Oxidation (M) 1397.6286 0.62855113 4578 Q9NQW7 XPNPEP1 Xaa-Pro aminopeptidase 1 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 39.435 34.379 3 0.0052306 47398 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.515 53.143 40701000 27912000 0 12789000 0 0 0 0 0 0 0 0 0 0 0 0 52521 4578 47158 440932;440933 348683;348684 348683 5981 0 TMIELSDNENPWTIFLETVDPELAASGATLPK Unmodified 3501.7225 0.72251768 3702 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 105.34 99.828 3 8.9198E-14 125000 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.914 59.807 14019000 7703700 6314900 0 0 0 0 0 0 0 0 0 0 0 0 0 52522 3702 47159 440934;440935;440936 348685;348686 348686 2 TMIELSDNENPWTIFLETVDPELAASGATLPK Oxidation (M) 3517.7174 0.7174323 3702 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 0 1 0 By MS/MS 2 0 1 1 104.97 96.837 3 1.274E-10 124391 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.237 46.396 6914900 6914900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52523 3702 47159 440937 348687 348687 5281 1 TMIISPER Oxidation (M) 961.49027 0.49026674 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 1 0 By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 1 2 2 1 1 2 2 2 2 2 2 31.038 31.264 2 0.021543 33695 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 54.157 23.972 148500000 0 0 0 4979500 5513700 14168000 14542000 5226200 5630000 14253000 17497000 11470000 18216000 16248000 20759000 52524 516 47160 440938;440939;440940;440941;440942;440943;440944;440945;440946;440947;440948;440949;440950;440951;440952;440953;440954;440955;440956;440957 348688;348689;348690;348691;348692;348693;348694;348695 348690 675 8 TMIISPER Unmodified 945.49535 0.49535211 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.783 43.958 2 0.013044 47685 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.248 59.324 295860000 0 0 0 15971000 17601000 21588000 17520000 19897000 16581000 26798000 28509000 35089000 23323000 28646000 44340000 52525 516 47160 440958;440959;440960;440961;440962;440963;440964;440965;440966;440967;440968;440969 348696;348697;348698;348699;348700;348701;348702;348703;348704 348697 9 TMIISPERLDPFADGGK Oxidation (M) 1861.9244 0.9243988 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 2 2 2 1 1 2 2 1 2 1 1 79.999 80.082 2;3 1.4499E-07 92714 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 83.617 70.19 190990000 0 0 0 0 9188400 24533000 15364000 26562000 2243600 38978000 29197000 5768200 24277000 3909900 10967000 52526 516 47161 440970;440971;440972;440973;440974;440975;440976;440977;440978;440979;440980;440981;440982;440983;440984;440985;440986 348705;348706;348707;348708;348709;348710;348711;348712;348713;348714 348713 675 3 TMIISPERLDPFADGGK Unmodified 1845.9295 0.92948418 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 1 By MS/MS 10 0 1 1 83.89 84.08 3 0.0033694 97024 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.179 30.764 11910000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11910000 52527 516 47161 440987 348715 348715 1 TMIQSPSGVILQEAADVHAR Oxidation (M) 2138.079 0.079001963 1029 P15924 DSP Desmoplakin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 77.911 78.076 3 6.4446E-10 90105 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 76.78 72.66 249570000 0 0 0 0 0 0 0 119270000 16279000 22971000 20425000 32696000 15949000 8982700 12992000 52528 1029 47162 440988;440989;440990;440991;440992;440993;440994;440995 348716;348717;348718;348719;348720;348721;348722;348723 348716 1445 8 TMIQSPSGVILQEAADVHAR Unmodified 2122.0841 0.084087341 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS 10 0 1 1 80.392 80.582 3 0.03748 93088 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 22.24 13.193 5578300 0 0 0 0 0 0 0 5578300 0 0 0 0 0 0 0 52529 1029 47162 440996 348724 348724 1 TMLEDLGMDDEGDDDPVPLPNVNAAILK 2 Oxidation (M) 3028.3893 0.38929823 1946 P63208 SKP1 S-phase kinase-associated protein 1 yes yes 0 2 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 93.908 88.489 3 3.7422E-56 111033 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.5 113.62 279800000 84081000 195710000 0 0 0 0 0 0 0 0 0 0 0 0 0 52530 1946 47163 440997;440998;440999 348725;348726;348727 348725 3123;3124 3 TMLEDLGMDDEGDDDPVPLPNVNAAILK Oxidation (M) 3012.3944 0.3943836 1946 P63208 SKP1 S-phase kinase-associated protein 1 yes yes 0 1 0 By MS/MS By MS/MS 2.5 0.5 3 3 2 4 96.009 91.377 3 1.8089E-30 114072 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 92.886 90.829 346360000 65795000 280570000 0 0 0 0 0 0 0 0 0 0 0 0 0 52531 1946 47163 441000;441001;441002;441003;441004;441005 348728;348729;348730;348731;348732;348733 348733 3123;3124 6 TMLEDLGMDDEGDDDPVPLPNVNAAILK Unmodified 2996.3995 0.39946898 1946 P63208 SKP1 S-phase kinase-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 2 3 1 97.603 93.114 3 1.5211E-34 115859 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.533 95.901 491550000 202950000 217530000 71064000 0 0 0 0 0 0 0 0 0 0 0 0 52532 1946 47163 441006;441007;441008;441009;441010;441011 348734;348735;348736;348737;348738 348737 5 TMLELINQLDGFDPR Oxidation (M) 1776.8716 0.87163495 1369 P35998 PSMC2 26S protease regulatory subunit 7 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 89.093 89.221 2 2.7134E-27 103320 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 134.2 118.66 18427000 0 0 0 0 0 2032300 0 0 0 6798800 5948400 0 0 0 3647000 52533 1369 47164 441012;441013;441014;441015;441016 348739;348740;348741;348742;348743 348740 2128 5 TMLELLNQLDGFEATK Oxidation (M) 1837.9132 0.91316541 1876 P62195 PSMC5 26S protease regulatory subunit 8 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 89.833 89.901 2 1.3577E-23 104329 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 120.14 105.98 22205000 0 0 0 0 1821000 0 0 0 0 9783500 6247500 3658800 0 693750 0 52534 1876 47165 441017;441018;441019;441020;441021 348744;348745;348746;348747;348748 348746 3043 5 TMLELLNQLDGFQPNTQVK Oxidation (M) 2204.1147 0.11471877 1066 P17980 PSMC3 26S protease regulatory subunit 6A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 7 1 2 1 1 1 1 89.38 89.466 2;3 1.3923E-17 103811 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 96.306 90.7 32885000 0 0 0 0 2376300 0 0 0 0 18992000 5398600 2058300 0 963690 3095700 52535 1066 47166 441022;441023;441024;441025;441026;441027;441028 348749;348750;348751 348751 1510 3 TMLESAGGLIQTAR Oxidation (M) 1462.745 0.74497787 5187 Q9Y490 TLN1 Talin-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching 10 0 10 2 1 1 1 1 2 1 1 60.708 60.966 2 1.888E-05 69199 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 86.313 61.458 106730000 0 0 0 0 0 18721000 14121000 0 5438900 8700700 7984000 36702000 0 6130200 8936800 52536 5187 47167 441029;441030;441031;441032;441033;441034;441035;441036;441037;441038 348752;348753;348754;348755 348754 6571 4 TMLESAGGLIQTAR Unmodified 1446.7501 0.75006325 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.553 73.675 2 5.1626E-13 84256 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 134.13 104.39 166170000 0 0 0 0 7000100 19827000 10055000 6870900 6631100 18270000 17340000 19389000 13751000 13736000 33303000 52537 5187 47167 441039;441040;441041;441042;441043;441044;441045;441046;441047;441048;441049;441050 348756;348757;348758;348759;348760;348761;348762;348763;348764;348765;348766 348759 11 TMLETEEGILLLVR Oxidation (M) 1631.8804 0.88040872 417 O60610 DIAPH1 Protein diaphanous homolog 1 yes yes 0 1 0 By MS/MS 3 0 1 1 95.201 91.697 2 0.020215 94539 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 45.359 38.386 881720 881720 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52538 417 47168 441051 348767 348767 527 1 TMLETEEGILLLVR Unmodified 1615.8855 0.8854941 417 O60610 DIAPH1 Protein diaphanous homolog 1 yes yes 0 0 0 By MS/MS 2 0 1 1 98.868 90.738 2 0.0022548 117039 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.781 60.907 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52539 417 47168 441052 348768 348768 1 TMLYTPQEMK 2 Oxidation (M) 1272.573 0.57301009 5086 Q9Y265 RUVBL1 RuvB-like 1 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 24 2 2 2 2 3 2 2 3 2 2 1 1 33.399 33.554 2 0.00093659 35699 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 79.059 66.022 471110000 0 0 0 20152000 21835000 32215000 31609000 37615000 30419000 49647000 61374000 52646000 54814000 26900000 51887000 52540 5086 47169 441053;441054;441055;441056;441057;441058;441059;441060;441061;441062;441063;441064;441065;441066;441067;441068;441069;441070;441071;441072;441073;441074;441075;441076 348769;348770;348771;348772;348773;348774;348775;348776;348777;348778;348779;348780;348781 348778 6477;6478 10 TMLYTPQEMK Oxidation (M) 1256.5781 0.57809546 5086 Q9Y265 RUVBL1 RuvB-like 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 1 2 2 2 2 2 1 2 45.094 45.261 2 0.0005159 52204 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 119.86 114.31 264590000 0 0 0 16015000 17530000 20108000 17175000 11121000 13788000 25603000 26900000 38896000 23263000 11931000 42257000 52541 5086 47169 441077;441078;441079;441080;441081;441082;441083;441084;441085;441086;441087;441088;441089;441090;441091;441092;441093;441094;441095;441096;441097;441098 348782;348783;348784;348785;348786;348787;348788;348789;348790;348791;348792;348793;348794;348795;348796;348797;348798;348799;348800;348801;348802;348803 348789 6477;6478 22 TMLYTPQEMK Unmodified 1240.5832 0.58318084 5086 Q9Y265 RUVBL1 RuvB-like 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.592 56.716 2 0.0067885 63574 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 133.57 117.96 210920000 0 0 0 6083500 8669400 12664000 10596000 17457000 6844000 14276000 23860000 18801000 21388000 23369000 46915000 52542 5086 47169 441099;441100;441101;441102;441103;441104;441105;441106;441107;441108;441109;441110 348804;348805;348806;348807;348808;348809;348810;348811 348806 6 TMMSPDGFEIFR 2 Oxidation (M) 1461.6268 0.62683657 3974 Q96RS0 TGS1 Trimethylguanosine synthase yes yes 0 2 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 76.72 76.867 2 0.0023933 88570 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 50.194 44.193 11925000 0 0 0 0 0 3623600 4180200 0 0 0 0 0 0 0 4120700 52543 3974 47170 441111;441112;441113 348812;348813 348813 5458;5459 2 TMNEIYR Unmodified 925.43275 0.43275186 465 O75153 CLUH Clustered mitochondria protein homolog yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 29.207 29.531 2 0.03357 30866 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.852 48.057 31022000 0 0 0 0 0 0 0 3436600 1528100 3905100 6463600 0 0 0 15688000 52544 465 47171 441114;441115;441116;441117;441118 348814 348814 1 TMNISPEQPQH Oxidation (M) 1296.5768 0.57684991 5301 Q9Y6Y8 SEC23IP SEC23-interacting protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 22.82 23.026 2 0.00047656 23766 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 77.677 70.782 117360000 0 0 0 7952900 6289100 7159200 9948200 9660600 6570800 12203000 8019200 12874000 13207000 9602400 13874000 52545 5301 47172 441119;441120;441121;441122;441123;441124;441125;441126;441127;441128;441129;441130;441131;441132;441133;441134;441135;441136;441137;441138;441139;441140;441141;441142 348815;348816;348817;348818;348819;348820;348821;348822 348816 6702 7 TMNISPEQPQH Unmodified 1280.5819 0.58193529 5301 Q9Y6Y8 SEC23IP SEC23-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.785 36.967 2 3.1731E-08 40614 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 150.53 145.92 188670000 0 0 0 8898900 8406800 12240000 12476000 12194000 9295300 20262000 16693000 21141000 21746000 13609000 31705000 52546 5301 47172 441143;441144;441145;441146;441147;441148;441149;441150;441151;441152;441153;441154 348823;348824;348825;348826;348827;348828;348829;348830;348831;348832;348833;348834 348828 12 TMNIYFPK Oxidation (M) 1028.5001 0.50010314 5085 Q9Y263 PLAA Phospholipase A-2-activating protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 54.216 53.037 2 0.012212 72147 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.492 77.709 297550000 37752000 105610000 0 0 0 27502000 7822100 0 13408000 22845000 0 17483000 19235000 14454000 31437000 52547 5085 47173 441155;441156;441157;441158;441159;441160;441161;441162;441163;441164 348835;348836;348837;348838 348838 6475 4 TMNIYFPK Unmodified 1012.5052 0.50518852 5085 Q9Y263 PLAA Phospholipase A-2-activating protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71.055 70.016 2 0.019675 89502 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.89 81.649 419310000 204060000 151720000 6616000 2091500 0 7989800 2583900 3417700 2580400 5133100 6970400 5181200 2942100 4340200 13693000 52548 5085 47173 441165;441166;441167;441168;441169;441170;441171;441172;441173;441174;441175;441176;441177;441178 348839;348840;348841 348839 2 TMNNFLDREQYGQYALAVR Oxidation (M) 2304.0957 0.095714659 2075 Q02413 DSG1 Desmoglein-1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 76.412 76.426 3 5.2716E-51 88043 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 143.71 139.26 192700000 0 0 0 10869000 3183300 21205000 0 60309000 18933000 23226000 16688000 28055000 10231000 0 0 52549 2075 47174 441179;441180;441181;441182;441183;441184;441185;441186;441187;441188 348842;348843;348844;348845;348846;348847;348848;348849;348850;348851;348852;348853;348854;348855;348856 348848 3373 15 TMNVLAESDPGFK Oxidation (M) 1423.6653 0.66533057 3239 Q8IWE2 FAM114A1 Protein NOXP20 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 57.177 56.312 2 6.1976E-06 72142 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.93 88.337 164280000 0 50261000 1799700 9220200 7410200 7860700 10055000 7636200 7742800 9036600 9575200 14291000 10441000 7483600 11467000 52550 3239 47175 441189;441190;441191;441192;441193;441194;441195;441196;441197;441198;441199;441200;441201;441202;441203;441204 348857;348858;348859;348860;348861;348862;348863;348864;348865;348866;348867;348868;348869;348870;348871;348872;348873 348861 4853 17 TMNVLAESDPGFK Unmodified 1407.6704 0.67041595 3239 Q8IWE2 FAM114A1 Protein NOXP20 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 69.927 69.068 2 8.3696E-05 79435 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 100.72 83.286 332810000 0 255290000 0 0 5433700 8410700 9586500 9487300 6381400 12792000 17184000 0 8243200 0 0 52551 3239 47175 441205;441206;441207;441208;441209;441210;441211;441212;441213;441214;441215;441216 348874;348875;348876;348877;348878;348879;348880 348874 7 TMPVNGAHK Acetyl (Protein N-term) 995.48585 0.48585006 1335 P34896 SHMT1 Serine hydroxymethyltransferase, cytosolic yes yes 1 0 0 By MS/MS 10 0 1 1 23.858 24.525 2 0.012982 24988 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.447 24.744 3902800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3902800 52552 1335 47176 441217 348881 348881 1 TMQALEK Oxidation (M) 835.41095 0.41095378 4952 Q9UK41 VPS28 Vacuolar protein sorting-associated protein 28 homolog yes yes 0 1 0 By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 7.1545 7.2761 2 0.016932 5183 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 80.229 24.107 38446000 0 0 0 1884300 3364400 0 3809000 3386000 0 5625800 8182200 3438100 3879300 0 4876700 52553 4952 47177 441218;441219;441220;441221;441222;441223;441224;441225;441226 348882;348883 348882 6298 2 TMQDSVEDFK Oxidation (M) 1214.5125 0.51251832 77 CON__P19013;P19013 KRT4 Keratin, type II cytoskeletal 4 yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 31.907 32.09 2 0.0011356 34894 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 89.08 83.421 + 238440000 0 0 0 0 0 0 68242000 132840000 0 0 0 0 37352000 0 0 52554 77 47178 441227;441228;441229;441230;441231 348884;348885;348886;348887;348888;348889 348886 111 6 TMQDSVEDFK Unmodified 1198.5176 0.5176037 77 CON__P19013;P19013 KRT4 Keratin, type II cytoskeletal 4 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 45.009 45.339 2 0.00092213 50892 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 113.62 106.14 + 272800000 0 0 0 0 0 0 66871000 158810000 0 0 0 10563000 36550000 0 0 52555 77 47178 441232;441233;441234;441235 348890;348891;348892;348893;348894 348892 5 TMQGEGPQLLLSEAVSR Oxidation (M) 1830.9146 0.9145624 1502 P46379 BAG6 Large proline-rich protein BAG6 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.057 82.119 2 3.2251E-36 94896 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 126.63 120.91 225910000 0 0 0 4045700 10320000 17225000 12931000 15537000 16403000 26203000 24216000 32275000 16693000 20994000 29072000 52556 1502 47179 441236;441237;441238;441239;441240;441241;441242;441243;441244;441245;441246;441247 348895;348896;348897;348898;348899;348900;348901;348902;348903;348904;348905;348906 348896 2375 12 TMQGEGPQLLLSEAVSR Unmodified 1814.9196 0.91964777 1502 P46379 BAG6 Large proline-rich protein BAG6 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 2 1 1 2 1 84.433 84.6 2;3 9.896E-25 97766 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 105.14 93.408 35111000 0 0 0 0 0 0 0 8053800 3234100 0 4065800 0 0 4323800 15434000 52557 1502 47179 441248;441249;441250;441251;441252;441253;441254 348907;348908;348909 348907 3 TMQGEGPQLLLSEAVSRAAK Oxidation (M) 2101.0838 0.08375299 1502 P46379 BAG6 Large proline-rich protein BAG6 yes yes 0 1 1 By MS/MS 2 0 1 1 89.731 81.601 3 3.1502E-72 106038 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 144.92 135.55 28995000 28995000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52558 1502 47180 441255 348910 348910 2375 1 TMQGSEVVNVLK Oxidation (M) 1319.6755 0.67550132 3549 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 6.9 3.81 3 1 6 1 2 1 1 1 1 1 1 1 55.7 53.371 2 1.4622E-09 68737 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.9 90.477 494300000 7735000 385150000 4500700 0 0 22698000 12662000 0 0 0 0 20345000 21472000 0 19736000 52559 3549 47181 441256;441257;441258;441259;441260;441261;441262;441263;441264;441265 348911;348912;348913;348914;348915;348916;348917 348913 5047 6 TMQGSEVVNVLK Unmodified 1303.6806 0.6805867 3549 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 64.927 64.562 2 2.8153E-05 73774 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 96.89 67.08 628170000 0 515790000 0 3952600 3058600 10476000 4898300 4673100 4444400 13477000 10581000 10591000 9491300 10297000 26444000 52560 3549 47181 441266;441267;441268;441269;441270;441271;441272;441273;441274;441275;441276;441277;441278 348918;348919;348920;348921;348922;348923;348924;348925;348926;348927;348928;348929;348930 348919 12 TMQNTNDVETAR Oxidation (M) 1394.6096 0.6096066 1341 P35222 CTNNB1 Catenin beta-1 yes yes 0 1 0 By MS/MS By matching By matching 10 0 3 1 1 1 11.975 11.913 2 0.0076292 10776 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 45.137 40.353 3091100 0 0 0 1390800 0 919040 781260 0 0 0 0 0 0 0 0 52561 1341 47182 441279;441280;441281 348931 348931 2033 1 TMQNTSDLDTAR Oxidation (M) 1367.5987 0.59870757 1010 P14923 JUP Junction plakoglobin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 17.622 17.777 2 1.554E-05 17465 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 91.549 82.335 431840000 0 0 0 131860000 23071000 23882000 21523000 113440000 12483000 22914000 19604000 0 39020000 15301000 8749000 52562 1010 47183 441282;441283;441284;441285;441286;441287;441288;441289;441290;441291;441292;441293 348932;348933;348934;348935;348936;348937;348938;348939;348940;348941;348942;348943 348940 1398 12 TMQNTSDLDTAR Unmodified 1351.6038 0.60379294 1010 P14923 JUP Junction plakoglobin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.136 26.336 2 2.4838E-05 28032 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 109.42 100.06 405230000 0 0 0 116180000 19192000 24087000 14320000 84449000 14067000 19922000 18947000 35736000 33152000 12938000 12236000 52563 1010 47183 441294;441295;441296;441297;441298;441299;441300;441301;441302;441303;441304;441305 348944;348945;348946;348947;348948;348949;348950;348951;348952;348953;348954;348955;348956 348946 13 TMQTLLSLVR Oxidation (M) 1176.6536 0.65364367 729 P00492 HPRT1 Hypoxanthine-guanine phosphoribosyltransferase yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 78.505 78.714 2 0.017344 90456 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.318 36.672 25185000 0 0 0 0 0 0 0 0 0 0 0 11905000 0 0 13280000 52564 729 47184 441306;441307 348957;348958 348957 880 2 TMQTLLSLVR Unmodified 1160.6587 0.65872905 729 P00492 HPRT1 Hypoxanthine-guanine phosphoribosyltransferase yes yes 0 0 0 By MS/MS 10 0 1 1 86.627 86.785 2 0.017406 100243 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.35 46.373 6430500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6430500 52565 729 47184 441308 348959 348959 1 TMRQEDYMK Oxidation (M) 1216.5216 0.52164322 1029 P15924 DSP Desmoplakin yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 2 2 1 1 2 1 1 1 1 2 1 1 10.796 10.911 3 0.03017 10446 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 53.756 21.436 138860000 0 0 0 39482000 10509000 5793000 4834100 28596000 4591800 4525700 4912000 12404000 15474000 4453900 3282400 52566 1029 47185 441309;441310;441311;441312;441313;441314;441315;441316;441317;441318;441319;441320;441321;441322;441323;441324 348960;348961;348962 348962 1448;1449 0 TMRQEDYMK 2 Oxidation (M) 1232.5166 0.51655784 1029 P15924 DSP Desmoplakin yes yes 0 2 1 By MS/MS By MS/MS By matching By matching 10 0 4 1 1 1 1 5.9604 5.9605 3 0.0086874 3483 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 54.259 21.845 44729000 0 0 0 32357000 5241700 0 6341600 0 0 0 0 0 788590 0 0 52567 1029 47185 441325;441326;441327;441328 348963 348963 1448;1449 1 TMSQEFSK Unmodified 956.42733 0.42733213 2816 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.235 21.44 2 0.031786 21032 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.712 35.618 89666000 0 0 0 4418500 4632900 7531800 5954100 5295400 4061300 6657800 9846600 10713000 8063400 7095000 15397000 52568 2816 47186 441329;441330;441331;441332;441333;441334;441335;441336;441337;441338;441339;441340 348964;348965 348964 2 TMTDVVGNPEEER Oxidation (M) 1491.6511 0.65113707 3856 Q96GM5 SMARCD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 2 1 1 31.582 31.92 2 2.3285E-09 35109 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 113.63 87.586 22610000 0 0 0 0 0 7280300 0 0 0 0 0 0 4679700 4832300 5817400 52569 3856 47187 441341;441342;441343;441344;441345;441346;441347;441348;441349;441350;441351 348966;348967;348968;348969;348970;348971;348972;348973;348974;348975;348976 348966 5366 10 TMTELEIDMNQR 2 Oxidation (M) 1511.6596 0.65959326 1488 P45974 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 2 1 40.615 41.127 2 0.00047278 45242 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 67.704 53.586 16430000 0 0 0 0 0 4372300 0 0 0 0 0 6918500 0 0 5139200 52570 1488 47188 441352;441353;441354;441355;441356 348977;348978;348979;348980 348980 2337;2338 4 TMTLFSALR Oxidation (M) 1054.5481 0.54811597 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.121 73.187 2 0.0024798 85021 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 96.253 84.108 209790000 0 0 0 10876000 16439000 24835000 13903000 17382000 14370000 20938000 19800000 18235000 16166000 15825000 21023000 52571 2392 47189 441357;441358;441359;441360;441361;441362;441363;441364;441365;441366;441367;441368 348981;348982;348983;348984;348985;348986;348987;348988;348989;348990;348991;348992;348993 348992 3921 13 TMTLFSALR Unmodified 1038.5532 0.55320134 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 82.138 82.198 2 0.0077155 94673 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.692 60.397 41051000 0 0 0 859010 808830 4268900 1419300 3407000 1518100 2362800 2909000 3673400 0 4142000 15683000 52572 2392 47189 441369;441370;441371;441372;441373;441374;441375;441376;441377;441378;441379 348994;348995;348996;348997 348996 4 TMTTSHLK Oxidation (M) 933.45897 0.45896661 2455 Q14919 DRAP1 Dr1-associated corepressor yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 4.746 1.8182 2 0.011259 2122 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 98.523 59.305 1006900000 685600000 286390000 34937000 0 0 0 0 0 0 0 0 0 0 0 0 52573 2455 47190 441380;441381;441382 348998;348999;349000;349001 348999 4039 4 TMTTSHLK Unmodified 917.46405 0.46405199 2455 Q14919 DRAP1 Dr1-associated corepressor yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 12.302 9.1783 2 0.028065 11451 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 77.923 52.472 322130000 270990000 0 51142000 0 0 0 0 0 0 0 0 0 0 0 0 52574 2455 47190 441383;441384 349002 349002 1 TMVAFDMDGK 2 Oxidation (M) 1145.4733 0.47329604 2831 Q5VZE5 NAA35 N-alpha-acetyltransferase 35, NatC auxiliary subunit yes yes 0 2 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 30.294 30.739 2 0.0070893 32852 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 46.406 37.988 43826000 0 0 0 0 0 0 0 0 0 10571000 9867300 23388000 0 0 0 52575 2831 47191 441385;441386;441387 349003;349004;349005;349006 349006 4490;4491 4 TMVAFDMDGK Unmodified 1113.4835 0.4834668 2831 Q5VZE5 NAA35 N-alpha-acetyltransferase 35, NatC auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 63.69 62.598 2 0.010734 79421 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.985 61.026 66762000 0 7385900 0 0 3366200 0 0 0 0 12025000 20261000 23724000 0 0 0 52576 2831 47191 441388;441389;441390;441391;441392 349007;349008;349009;349010 349008 2 TMVAFDMDGK Oxidation (M) 1129.4784 0.47838142 2831 Q5VZE5 NAA35 N-alpha-acetyltransferase 35, NatC auxiliary subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 4 1 1 2 43.549 44.007 2 0.0048029 48651 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 62.823 59.414 75111000 0 0 0 0 0 0 0 0 0 15415000 27741000 31954000 0 0 0 52577 2831 47191 441393;441394;441395;441396 349011;349012;349013 349012 4490;4491 3 TMVDPNSR Unmodified 918.42292 0.42291545 4665 Q9NVD7 PARVA Alpha-parvin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 16.084 16.311 2 0.035595 14739 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 52.403 28.607 54450000 0 0 0 0 0 6627900 3429500 0 2691600 8165600 7699900 8762000 8621500 8452200 0 52578 4665 47192 441397;441398;441399;441400;441401;441402;441403;441404 349014 349014 1 TMVEAADREK Unmodified 1148.5496 0.54957253 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 13.57 13.675 3 0.022306 13458 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 60.064 45.946 59269000 0 0 0 4335600 0 0 9313300 6206800 0 15368000 0 0 12934000 11111000 0 52579 1286 47193 441405;441406;441407;441408;441409;441410 349015;349016 349016 1 TMVGFGPEDDHFVAELTYNYGVGDYK Oxidation (M) 2939.296 0.29599019 4506 Q9HC38 GLOD4 Glyoxalase domain-containing protein 4 yes yes 0 1 0 By MS/MS 2 0 1 1 94.865 86.734 3 4.7374E-47 112215 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 116.72 110 42466000 42466000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52580 4506 47194 441411 349017;349018 349018 5940 2 TMVGFGPEDDHFVAELTYNYGVGDYK Unmodified 2923.3011 0.30107557 4506 Q9HC38 GLOD4 Glyoxalase domain-containing protein 4 yes yes 0 0 0 By MS/MS 2 0 1 1 96.766 88.636 3 1.4337E-78 114483 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 135.72 129 60225000 60225000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52581 4506 47194 441412 349019;349020 349020 2 TMVQELLDFK Oxidation (M) 1238.6217 0.62167484 2332 Q13620 CUL4B Cullin-4B yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.14 3.33 4 1 16 1 2 2 1 2 1 1 2 2 1 2 2 2 80.444 79.911 2 0.0024658 92088 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 75.378 58.282 134660000 0 55309000 20494000 0 0 2867600 3617100 1880500 2773900 7554300 7167000 8791000 6081000 5065400 13060000 52582 2332 47195 441413;441414;441415;441416;441417;441418;441419;441420;441421;441422;441423;441424;441425;441426;441427;441428;441429;441430;441431;441432;441433 349021;349022;349023;349024;349025;349026;349027;349028 349021 3803 7 TMVQELLDFK Unmodified 1222.6268 0.62676022 2332 Q13620 CUL4B Cullin-4B yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 94.296 88.888 2 0.0012967 112488 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 111.65 95.141 171700000 27746000 143960000 0 0 0 0 0 0 0 0 0 0 0 0 0 52583 2332 47195 441434;441435;441436 349029;349030;349031;349032 349032 4 TMYELACDVVAANK Unmodified 1583.7324 0.73236428 2929 Q6P2P2 PRMT9 Putative protein arginine N-methyltransferase 9 yes yes 0 0 0 By MS/MS 2 0 1 1 82.294 77.589 2 0.0027431 96533 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.39 86.709 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52584 2929 47196 441437 349033 349033 1 TMYLLGYIPK Oxidation (M) 1213.6417 0.641682 1358 P35606 COPB2 Coatomer subunit beta' yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 81.124 81.187 2 0.0076369 93495 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.968 40.991 30792000 0 0 0 0 1835900 4890900 0 3725800 0 3126100 0 0 3475700 4540700 9197100 52585 1358 47197 441438;441439;441440;441441;441442;441443;441444 349034;349035;349036;349037;349038 349036 2104 5 TMYLLGYIPK Unmodified 1197.6468 0.64676738 1358 P35606 COPB2 Coatomer subunit beta' yes yes 0 0 0 By MS/MS 10 0 1 1 87.177 87.336 2 0.024578 101039 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.531 40.768 3026900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3026900 52586 1358 47197 441445 349039 349039 1 TMYPAPVTSSVYLSR Oxidation (M) 1686.8287 0.8287075 624 O95163 IKBKAP Elongator complex protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 71.107 71.206 2 0.00036541 81883 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 63.537 52.779 46263000 0 0 0 2373800 0 5326500 5215500 2692000 0 6386700 0 8215500 3742700 5643300 6667000 52587 624 47198 441446;441447;441448;441449;441450;441451;441452;441453;441454 349040;349041;349042;349043;349044;349045;349046;349047;349048 349040 766 9 TMYPAPVTSSVYLSRDPDGNK Oxidation (M) 2313.0947 0.094711606 624 O95163 IKBKAP Elongator complex protein 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.8 3.92 2 3 1 1 1 1 1 67.626 65.443 3 6.0647E-06 74602 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.009 48.408 41310000 20372000 0 4762600 0 0 4149200 0 0 0 0 0 5819800 0 0 6206400 52588 624 47199 441455;441456;441457;441458;441459 349049;349050;349051;349052;349053 349050 766 5 TMYPAPVTSSVYLSRDPDGNK Unmodified 2297.0998 0.099796984 624 O95163 IKBKAP Elongator complex protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 76.185 70.878 3 3.9179E-13 91238 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.527 67.341 59711000 33030000 24293000 2387900 0 0 0 0 0 0 0 0 0 0 0 0 52589 624 47199 441460;441461;441462 349054;349055;349056;349057 349056 4 TNADIIETLR Unmodified 1144.6088 0.60880197 2450 Q14814 MEF2D Myocyte-specific enhancer factor 2D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 65.422 65.467 2 0.0017733 74010 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 95.523 60.085 111660000 0 0 0 7702800 7954900 8738100 12339000 8496900 6799500 10340000 13020000 12315000 13479000 10479000 0 52590 2450 47200 441463;441464;441465;441466;441467;441468;441469;441470;441471;441472;441473 349058;349059;349060;349061;349062;349063;349064;349065;349066;349067 349063 10 TNADIIETLRK Unmodified 1272.7038 0.70376498 2450 Q14814 MEF2D Myocyte-specific enhancer factor 2D yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 55.099 55.231 2;3 0.00086126 61259 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.951 41.412 420780000 0 0 0 25857000 23049000 27116000 37832000 35657000 28087000 36772000 37878000 39842000 34432000 36971000 57283000 52591 2450 47201 441474;441475;441476;441477;441478;441479;441480;441481;441482;441483;441484;441485;441486;441487;441488;441489;441490;441491;441492;441493;441494;441495;441496;441497 349068;349069;349070;349071;349072;349073;349074;349075;349076;349077;349078;349079;349080;349081;349082 349072 11 TNAENEFVTIK Unmodified 1264.6299 0.62993134 780 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 2 1 1 1 53.995 54.171 2 4.7052E-37 60906 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 182.46 158.69 + 13686000000 0 0 0 2277700000 1105900000 1014400000 893210000 0 1066200000 1283600000 987310000 2434500000 1564100000 644290000 414420000 52592 780 47202 441498;441499;441500;441501;441502;441503;441504;441505;441506;441507;441508;441509 349083;349084;349085;349086;349087;349088;349089;349090;349091;349092;349093;349094;349095;349096;349097;349098;349099;349100;349101;349102;349103;349104;349105;349106;349107;349108;349109;349110;349111;349112;349113;349114;349115;349116;349117;349118 349102 36 TNAENEFVTIKK Unmodified 1392.7249 0.72489436 780 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 37 3 3 2 2 5 3 5 4 3 3 2 2 42.843 43.014 2;3 4.9346E-134 47801 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 220.1 205.98 + 63343000000 0 0 0 6689200000 3960600000 1663100000 3307800000 15710000000 1895400000 5459000000 3967500000 12966000000 5138900000 1619400000 966290000 52593 780 47203 441510;441511;441512;441513;441514;441515;441516;441517;441518;441519;441520;441521;441522;441523;441524;441525;441526;441527;441528;441529;441530;441531;441532;441533;441534;441535;441536;441537;441538;441539;441540;441541;441542;441543;441544;441545;441546 349119;349120;349121;349122;349123;349124;349125;349126;349127;349128;349129;349130;349131;349132;349133;349134;349135;349136;349137;349138;349139;349140;349141;349142;349143;349144;349145;349146;349147;349148;349149;349150;349151;349152;349153;349154;349155;349156;349157;349158;349159;349160 349153 36 TNAFLVATSAPQAVLYNDR Unmodified 2050.0484 0.048353761 2406 Q14432 PDE3A cGMP-inhibited 3',5'-cyclic phosphodiesterase A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 2 2 2 2 2 2 85.78 85.887 2;3 1.5802E-11 99304 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 106.13 84.829 203080000 0 0 0 0 12072000 13110000 8455800 15740000 9967400 26343000 21139000 27288000 8237200 15753000 44973000 52594 2406 47204 441547;441548;441549;441550;441551;441552;441553;441554;441555;441556;441557;441558;441559;441560;441561;441562;441563;441564;441565;441566;441567;441568 349161;349162;349163;349164;349165;349166;349167;349168;349169;349170;349171 349164 11 TNALNVSQK Unmodified 973.51926 0.51925868 4704 Q9NWV8 BABAM1 BRISC and BRCA1-A complex member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.801 18.996 2 0.0077095 18032 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.708 41.901 95681000 0 0 0 5090200 3073600 9886800 4883100 4248400 3422700 10206000 10463000 11177000 6632400 6955100 19642000 52595 4704 47205 441569;441570;441571;441572;441573;441574;441575;441576;441577;441578;441579;441580 349172;349173;349174;349175;349176;349177;349178;349179;349180 349174 9 TNAPSRLNQSPSLAPVK Unmodified 1778.9639 0.96389585 4371 Q9H2P0 ADNP Activity-dependent neuroprotector homeobox protein yes yes 0 0 1 By MS/MS 2 0 1 1 54.675 46.567 3 0.011945 63844 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 37.645 25.444 10065000 10065000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52596 4371 47206 441581 349181 349181 1 TNATNNMNLSR Unmodified 1234.5724 0.57243324 5004 Q9ULT8 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 13 2 1 1 1 1 1 1 1 1 1 1 1 23.547 23.723 2 0.00030792 23587 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 94.692 77.916 59044000 0 0 0 4715400 2775700 4270300 4315700 3276200 2149500 4748800 4792500 5962700 5801400 4787600 11448000 52597 5004 47207 441582;441583;441584;441585;441586;441587;441588;441589;441590;441591;441592;441593;441594 349182;349183;349184;349185;349186;349187;349188;349189;349190;349191 349188 10 TNATNNMNLSR Oxidation (M) 1250.5673 0.56734786 5004 Q9ULT8 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 9.9434 10.05 2 0.0021592 7745 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.297 44.511 15453000 0 0 0 860580 951690 1779500 1963200 0 805890 1490800 0 2401000 1945300 1636300 1618500 52598 5004 47207 441595;441596;441597;441598;441599;441600;441601;441602;441603;441604 349192;349193;349194;349195 349193 6350 4 TNATSPGVNSSTSPQSTDK Unmodified 1877.8603 0.86027822 451 O75044 SRGAP2 SLIT-ROBO Rho GTPase-activating protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.118 20.319 2 1.9061E-06 19872 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.669 67.156 48975000 0 0 0 1907100 2916800 3864900 3599400 2457000 3058600 4645400 5671500 7274700 4702800 3663900 5212600 52599 451 47208 441605;441606;441607;441608;441609;441610;441611;441612;441613;441614;441615;441616 349196;349197;349198;349199;349200 349198 5 TNAVSEIK Unmodified 860.46035 0.46034682 4940 Q9UJU6 DBNL Drebrin-like protein yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 19.497 19.736 2 0.030702 20080 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 55.37 14.068 162910000 0 0 0 0 7130300 11411000 10429000 0 7712300 16907000 21628000 22973000 11835000 18160000 34724000 52600 4940 47209 441617;441618;441619;441620;441621;441622;441623;441624;441625;441626 349201 349201 1 TNCNVAVINVGAPAAGMNAAVR Unmodified 2169.0783 0.078290456 2064 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 1 3 2 1 2 2 3 1 2 2 77.223 77.338 2;3 5.4963E-101 89441 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 164.81 143.86 316480000 0 0 0 0 16139000 12817000 23427000 27916000 10157000 31433000 34734000 61764000 9537000 29275000 59280000 52601 2064 47210 441627;441628;441629;441630;441631;441632;441633;441634;441635;441636;441637;441638;441639;441640;441641;441642;441643;441644;441645;441646;441647 349202;349203;349204;349205;349206;349207;349208;349209;349210;349211;349212;349213;349214;349215;349216;349217 349210 16 TNCNVAVINVGAPAAGMNAAVR Oxidation (M) 2185.0732 0.073205078 2064 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 2 2 2 1 1 2 2 1 1 68.608 68.814 2;3 2.4268E-75 78929 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 131.66 111.28 206420000 0 0 0 0 0 19602000 25723000 25655000 17121000 22906000 5919400 35073000 26893000 6748800 20782000 52602 2064 47210 441648;441649;441650;441651;441652;441653;441654;441655;441656;441657;441658;441659;441660;441661;441662 349218;349219;349220;349221;349222;349223;349224;349225;349226;349227;349228;349229;349230;349231 349230 3356 8 TNDEVIHGIFK Unmodified 1271.651 0.65100113 5238 Q9Y5L0 TNPO3 Transportin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 5 10 1 1 3 1 1 1 1 1 1 1 1 1 1 62.564 60.934 2;3 0.00032302 80883 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.693 65.132 133130000 8411900 37992000 27821000 3405000 3435700 5054300 3326900 0 0 6696700 6730500 7051600 4486500 5942600 12780000 52603 5238 47211 441663;441664;441665;441666;441667;441668;441669;441670;441671;441672;441673;441674;441675;441676;441677 349232;349233;349234;349235;349236;349237;349238;349239;349240 349232 9 TNDFGMAEEFASK Unmodified 1445.6133 0.613295 4288 Q9C0D5 TANC1 Protein TANC1 yes yes 0 0 0 By MS/MS 2 0 1 1 76.93 72.093 2 0.0025231 89997 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.674 73.376 42138000 0 42138000 0 0 0 0 0 0 0 0 0 0 0 0 0 52604 4288 47212 441678 349241 349241 1 TNDQDGLISGILR Unmodified 1400.726 0.72595699 3485 Q8TC07 TBC1D15 TBC1 domain family member 15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.551 80.612 2 9.154E-07 92777 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 109.24 72.045 155750000 0 0 0 5888700 5973000 16741000 9596500 10037000 8796500 19211000 12759000 14127000 10500000 12004000 30115000 52605 3485 47213 441679;441680;441681;441682;441683;441684;441685;441686;441687;441688;441689;441690 349242;349243;349244;349245;349246;349247;349248;349249;349250;349251;349252;349253;349254 349246 12 TNEAQAIETAR Unmodified 1202.5891 0.58912916 1833 P61088;Q5JXB2 UBE2N;UBE2NL Ubiquitin-conjugating enzyme E2 N;Putative ubiquitin-conjugating enzyme E2 N-like yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 2 2 1 2 1 1 1 1 1 1 1 2 28.695 28.843 2 6.3519E-171 31298 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 231.38 96.901 1833200000 0 0 0 89657000 74813000 192300000 107400000 86763000 82657000 254260000 184360000 157550000 149020000 156870000 297570000 52606 1833 47214 441691;441692;441693;441694;441695;441696;441697;441698;441699;441700;441701;441702;441703;441704;441705;441706 349255;349256;349257;349258;349259;349260;349261;349262;349263;349264;349265;349266;349267;349268;349269;349270 349258 16 TNEEIHSESYNK Unmodified 1449.6372 0.63720156 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 14.051 14.214 2;3 5.2113E-08 13055 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 103.34 100.36 198210000 0 0 0 11269000 14011000 13245000 10563000 8851000 9047200 16964000 20599000 24177000 21273000 14821000 33390000 52607 3443 47215 441707;441708;441709;441710;441711;441712;441713;441714;441715;441716;441717;441718;441719;441720;441721;441722;441723;441724;441725;441726;441727;441728;441729;441730 349271;349272;349273;349274;349275;349276;349277;349278;349279;349280;349281;349282 349274 11 TNEELLRDLVAEHQAK Unmodified 1864.9643 0.96428978 3292 Q8IZ73 RPUSD2 RNA pseudouridylate synthase domain-containing protein 2 yes yes 0 0 1 By MS/MS 3 0 1 1 76.823 73.344 3 0.00081423 88102 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 68.919 65.079 7149700 0 7149700 0 0 0 0 0 0 0 0 0 0 0 0 0 52608 3292 47216 441731 349283 349283 1 TNELINISSSK Unmodified 1204.6299 0.62993134 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By MS/MS By matching By MS/MS 7.33 3.77 1 2 1 1 1 53.148 51.329 2 0.02012 65518 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 59.04 41.604 82375000 0 47240000 0 0 0 8606600 0 0 0 0 0 0 26528000 0 0 52609 2291 47217 441732;441733;441734 349284;349285 349284 1 TNELVLSLEDDERLLLK Unmodified 1999.0837 0.083736215 2669 Q3KRA6 C2orf76 UPF0538 protein C2orf76 yes yes 0 0 1 By MS/MS By MS/MS 2.67 0.471 1 2 2 1 97.567 92.583 3 1.0152E-35 116377 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 131.48 116.79 33143000 29468000 3675300 0 0 0 0 0 0 0 0 0 0 0 0 0 52610 2669 47218 441735;441736;441737 349286;349287;349288 349288 3 TNETGYQEAIVK Unmodified 1351.662 0.66195975 3288 Q8IYU8 MICU2 Calcium uptake protein 2, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 40.547 40.72 2 0.0066448 45561 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.092 35.941 26205000 0 0 0 3765400 0 4953600 0 0 2587200 4833400 4641900 5423700 0 0 0 52611 3288 47219 441738;441739;441740;441741;441742;441743 349289;349290;349291;349292 349289 4 TNETYGKLEAVQYK Unmodified 1642.8203 0.82025131 742 P01040 CSTA Cystatin-A;Cystatin-A, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.17 2.36 1 1 16 2 2 1 1 1 2 1 2 1 2 1 1 1 47.819 47.362 2;3 8.5783E-18 54046 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 134.98 110.12 244400000 0 25520000 0 51894000 9823800 5975100 13270000 21379000 6068500 24545000 15453000 42723000 11099000 7533700 9119300 52612 742 47220 441744;441745;441746;441747;441748;441749;441750;441751;441752;441753;441754;441755;441756;441757;441758;441759;441760;441761 349293;349294;349295;349296;349297;349298;349299;349300;349301;349302;349303;349304;349305;349306;349307;349308;349309;349310 349309 18 TNFDYLQEVPILTLDVNEDFK Unmodified 2512.2373 0.23733632 1223 P27707 DCK Deoxycytidine kinase yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 100.25 95.974 2;3 5.9125E-47 118587 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 153.23 143.36 46676000 0 46676000 0 0 0 0 0 0 0 0 0 0 0 0 0 52613 1223 47221 441762;441763;441764 349311;349312;349313 349311 2 TNFIEADK Unmodified 936.45526 0.45526144 5277 Q9Y6D6 ARFGEF1 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 36.299 31.452 2 0.027582 41045 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.334 50.116 51004000 0 51004000 0 0 0 0 0 0 0 0 0 0 0 0 0 52614 5277 47222 441765 349314;349315 349314 2 TNFMYQVDTLK Unmodified 1358.654 0.6540376 2661 Q32MZ4 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 74.853 74.522 2 6.64E-10 93001 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 160.36 139.36 648570000 0 530900000 0 0 5626800 9128000 5947800 0 9397700 12341000 9736600 18997000 8991100 12733000 24778000 52615 2661 47223 441766;441767;441768;441769;441770;441771;441772;441773;441774;441775;441776 349316;349317;349318;349319 349317 4 TNFMYQVDTLK Oxidation (M) 1374.649 0.64895222 2661 Q32MZ4 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 yes yes 0 1 0 By MS/MS 2 0 1 1 67.846 61.93 2 2.6604E-09 78936 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 141.29 127.09 100600000 0 100600000 0 0 0 0 0 0 0 0 0 0 0 0 0 52616 2661 47223 441777 349320;349321;349322;349323;349324 349321 4332 5 TNGDSQQPSSSGLASSK Unmodified 1649.7493 0.74927121 4978 Q9UKX7 NUP50 Nuclear pore complex protein Nup50 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.393 16.573 2 1.532E-13 15212 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.348 86.659 66190000 0 0 0 2936500 2494300 5275200 4012100 4613800 3499600 5920700 6698400 9940000 5119300 5087800 10592000 52617 4978 47224 441778;441779;441780;441781;441782;441783;441784;441785;441786;441787;441788;441789 349325;349326;349327;349328;349329;349330;349331;349332 349327 8 TNGILFCGR Unmodified 1036.5124 0.51239916 1344 P35237 SERPINB6 Serpin B6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 53.344 53.704 2 0.0037345 59658 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 101.33 44.78 59626000 0 0 0 0 0 0 0 6378400 0 0 12442000 0 0 11924000 28882000 52618 1344 47225 441790;441791;441792;441793 349333;349334;349335;349336 349334 4 TNGKEPELLEPIPYEFMA Oxidation (M) 2093.0027 0.0027087015 1509 P46778 RPL21 60S ribosomal protein L21 yes yes 0 1 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 89.112 89.217 2 0.013882 103749 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 49.423 43.93 30185000 0 0 0 0 1779900 0 1276200 2217600 0 5726700 4141900 5448400 1804900 2251400 5538200 52619 1509 47226 441794;441795;441796;441797;441798;441799;441800;441801;441802 349337;349338;349339 349339 2387 3 TNGLPVQNGIDADVK Unmodified 1539.7893 0.78928553 2425 Q14671 PUM1 Pumilio homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.581 60.685 2 1.3208E-18 68402 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 124.21 124.21 238720000 0 0 0 12849000 13476000 13192000 20092000 19352000 14333000 19351000 24277000 28950000 22861000 19793000 30194000 52620 2425 47227 441803;441804;441805;441806;441807;441808;441809;441810;441811;441812;441813;441814 349340;349341;349342;349343;349344;349345;349346;349347;349348;349349;349350 349346 11 TNHFAIVNLR Unmodified 1183.6462 0.64619053 4669 Q9NVI1 FANCI Fanconi anemia group I protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 1 2 2 2 2 1 2 2 2 2 2 59.963 60.096 2;3 0.00092025 68776 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 75.509 59.131 244420000 0 0 0 11030000 8285400 26000000 18283000 21737000 18606000 16222000 18289000 33170000 20920000 21043000 30833000 52621 4669 47228 441815;441816;441817;441818;441819;441820;441821;441822;441823;441824;441825;441826;441827;441828;441829;441830;441831;441832;441833;441834;441835;441836 349351;349352;349353;349354;349355;349356;349357;349358;349359;349360;349361;349362;349363;349364 349361 12 TNHIETLGK Unmodified 1011.5349 0.53490874 2189 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 17.31 17.496 2 0.021454 18076 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 52.255 33.524 72299000 0 0 0 4904700 4269300 5087600 3902400 3169900 2894200 6117100 7188500 8788300 9546500 6529200 9901800 52622 2189 47229 441837;441838;441839;441840;441841;441842;441843;441844;441845;441846;441847;441848 349365;349366 349366 2 TNHIGHTGYLNTVTVSPDGSLCASGGK Unmodified 2742.3031 0.30314125 1950 P63244 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 2.71 2.05 11 2 1 7 4 2 1 70.952 65.025 3;4 2.8714E-120 84571 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 152.13 145.48 2729000000 2347100000 290850000 63178000 0 0 0 0 0 0 0 0 0 0 0 27806000 52623 1950 47230 441849;441850;441851;441852;441853;441854;441855;441856;441857;441858;441859;441860;441861;441862 349367;349368;349369;349370;349371;349372;349373;349374;349375;349376;349377;349378;349379;349380;349381;349382;349383 349368 14 TNHIYVSSDDIK Unmodified 1390.6729 0.67285879 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 15 1 1 1 1 1 1 2 2 1 1 1 2 37.184 37.418 2;3 0.00012931 40047 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 102.4 68.525 259160000 0 0 0 10396000 11534000 15644000 12148000 19613000 10704000 25592000 31833000 28939000 21524000 24674000 46554000 52624 2930 47231 441863;441864;441865;441866;441867;441868;441869;441870;441871;441872;441873;441874;441875;441876;441877 349384;349385;349386;349387;349388;349389;349390;349391;349392;349393;349394 349388 11 TNIDESAMPPPPPQGVK Oxidation (M) 1792.8665 0.86654957 382 O60216 RAD21 Double-strand-break repair protein rad21 homolog yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 47.012 47.276 2 2.9853E-10 52359 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.403 78.88 40317000 0 0 0 0 2930300 0 4757400 0 2379300 6033100 6477100 5979000 4314400 0 7446000 52625 382 47232 441878;441879;441880;441881;441882;441883;441884;441885 349395;349396;349397;349398;349399;349400;349401 349397 491 7 TNIDESAMPPPPPQGVK Unmodified 1776.8716 0.87163495 382 O60216 RAD21 Double-strand-break repair protein rad21 homolog yes yes 0 0 0 By MS/MS 10 0 1 1 56.996 57.608 2 0.0064425 64769 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.452 42.876 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52626 382 47232 441886 349402 349402 1 TNIFQIQR Unmodified 1018.556 0.55597854 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.668 60.773 2 0.037039 69528 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 90.777 64.883 114630000 0 0 0 4529500 4935300 8946500 9058300 7050100 2933000 12772000 11142000 16705000 9682600 9567400 17306000 52627 3119 47233 441887;441888;441889;441890;441891;441892;441893;441894;441895;441896;441897;441898 349403;349404 349403 0 TNILNSEQVIVEVLPNQPVK Unmodified 2233.2318 0.23179744 28 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2.4 0.49 3 2 4 1 93.808 90.072 2;3 1.8283E-30 111780 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.38 101.55 117400000 0 115800000 1596700 0 0 0 0 0 0 0 0 0 0 0 0 52628 28 47234 441899;441900;441901;441902;441903 349405;349406;349407;349408 349405 4 TNISTASATVSAATSTESISTRK Unmodified 2283.1554 0.15539761 2113 Q05209 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.18 3.74 3 1 7 2 1 1 1 1 1 1 1 1 1 59.778 57.87 3 9.0593E-24 76434 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.53 96.952 142770000 45906000 19400000 10803000 0 0 7278000 0 7652800 0 0 9904400 14145000 7806200 7005600 12869000 52629 2113 47235 441904;441905;441906;441907;441908;441909;441910;441911;441912;441913;441914 349409;349410;349411;349412;349413;349414;349415;349416 349413 8 TNIVTASVDAINFHDK Unmodified 1743.8792 0.87916317 120 O00154 ACOT7 Cytosolic acyl coenzyme A thioester hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.8 3.53 6 1 18 2 3 2 2 2 3 3 3 3 1 1 79.845 78.49 2;3 5.0269E-65 90737 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 186.16 171.19 3633500000 169110000 193010000 98431000 66789000 248260000 481870000 0 0 0 1029900000 631150000 701000000 6427900 7608400 0 52630 120 47236 441915;441916;441917;441918;441919;441920;441921;441922;441923;441924;441925;441926;441927;441928;441929;441930;441931;441932;441933;441934;441935;441936;441937;441938;441939 349417;349418;349419;349420;349421;349422;349423;349424;349425;349426;349427;349428;349429;349430;349431;349432;349433;349434;349435;349436;349437;349438;349439;349440;349441 349437 19 TNLANVVLLLK Unmodified 1196.7493 0.74925861 3642 Q92620 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 yes yes 0 0 0 By MS/MS 10 0 1 1 91.272 91.41 2 0.01238 105897 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.603 27.816 1316200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1316200 52631 3642 47237 441940 349442 349442 1 TNLASTVLSLK Unmodified 1145.6656 0.66558856 2414 Q14562 DHX8 ATP-dependent RNA helicase DHX8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.129 79.177 2 0.00605 91473 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 57.532 34.89 71273000 0 0 0 5604000 3942100 4480900 4975800 0 5484300 7895400 7931300 10475000 5323200 5137000 10024000 52632 2414 47238 441941;441942;441943;441944;441945;441946;441947;441948;441949;441950;441951 349443;349444;349445;349446;349447;349448;349449;349450;349451;349452 349444 10 TNLDESDVQPVK Unmodified 1343.6569 0.65687437 5168 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.711 38.89 2 1.2469E-06 43200 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 140.78 105.24 853030000 0 0 0 52132000 45020000 83534000 55398000 49378000 40963000 73924000 112030000 93405000 64579000 57477000 125190000 52633 5168 47239 441952;441953;441954;441955;441956;441957;441958;441959;441960;441961;441962;441963 349453;349454;349455;349456;349457;349458;349459;349460;349461;349462;349463;349464 349457 10 TNLEEFASK Unmodified 1037.5029 0.50293991 3862 Q96H20 SNF8 Vacuolar-sorting protein SNF8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 43.648 44.095 2 0.005081 48352 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.213 60.058 72769000 0 0 0 0 0 0 0 0 0 0 0 0 16398000 21441000 34930000 52634 3862 47240 441964;441965;441966;441967 349465;349466;349467;349468 349466 4 TNLFVFK Unmodified 867.48544 0.48543935 5202 Q9Y4G8 RAPGEF2 Rap guanine nucleotide exchange factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 73.614 73.774 2 0.034226 85111 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 71.378 0 34001000 0 0 0 0 0 4467800 3072900 5069200 0 4313200 4083000 0 4081200 0 8913900 52635 5202 47241 441968;441969;441970;441971;441972;441973;441974 349469;349470;349471 349469 3 TNLIVNYLPQNMTQDELR Oxidation (M) 2177.0787 0.078667612 2566 Q15717 ELAVL1 ELAV-like protein 1 yes yes 0 1 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 16 1 1 2 1 1 2 2 2 2 1 1 82.457 82.539 2;3 5.7681E-33 95547 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 121.28 102.07 117650000 0 0 0 2138700 3178200 11853000 3209000 4121800 7991600 22175000 20456000 19518000 0 15597000 7409000 52636 2566 47242 441975;441976;441977;441978;441979;441980;441981;441982;441983;441984;441985;441986;441987;441988;441989;441990 349472;349473;349474;349475;349476;349477 349473 4218 6 TNLIVNYLPQNMTQDELR Unmodified 2161.0838 0.08375299 2566 Q15717 ELAVL1 ELAV-like protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 87.813 87.963 2 5.2469E-06 101746 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.262 61.816 3702400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3702400 52637 2566 47242 441991 349478 349478 1 TNLLDELPQSVLK Unmodified 1468.8137 0.81370936 3202 Q86Y07 VRK2 Serine/threonine-protein kinase VRK2 yes yes 0 0 0 By MS/MS 2 0 1 1 94.271 89.375 2 0.0023042 110859 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.908 65.454 24785000 0 24785000 0 0 0 0 0 0 0 0 0 0 0 0 0 52638 3202 47243 441992 349479 349479 1 TNLLLQAHLSR Unmodified 1264.7252 0.72516913 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 62.364 62.532 3 0.03393 70527 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 34.685 28.537 47004000 0 0 0 0 2369700 4403600 3830600 3898900 3628000 4689000 4858200 5318300 0 4110800 9896900 52639 528 47244 441993;441994;441995;441996;441997;441998;441999;442000;442001;442002 349480 349480 1 TNLSAVVAAQSNWEK Unmodified 1616.8158 0.81583463 578 O76094 SRP72 Signal recognition particle subunit SRP72 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.18 3.74 3 1 7 1 2 1 1 1 1 1 1 1 1 75.65 74.04 2 2.5478E-90 93884 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 256.7 210.73 211250000 58569000 76584000 3827000 0 0 7627100 0 12077000 8597100 11031000 11657000 8572400 0 0 12705000 52640 578 47245 442003;442004;442005;442006;442007;442008;442009;442010;442011;442012;442013 349481;349482;349483;349484;349485;349486;349487;349488;349489;349490;349491;349492 349488 11 TNLSVHEDK Unmodified 1041.5091 0.50908792 1328 P33176;Q12840 KIF5B;KIF5A Kinesin-1 heavy chain;Kinesin heavy chain isoform 5A yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 12.868 12.149 2 0.0005565 15521 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.35 72.652 670800000 13089000 455130000 26912000 10541000 11336000 16884000 13485000 11347000 12297000 21187000 15356000 12239000 18936000 14926000 17138000 52641 1328 47246 442014;442015;442016;442017;442018;442019;442020;442021;442022;442023;442024;442025;442026;442027;442028;442029 349493;349494;349495;349496;349497;349498;349499;349500;349501;349502;349503;349504;349505;349506 349497 9 TNLTSQSSTTNLPGSPGSPGSPGSPGSPGSVPK Unmodified 3036.4636 0.46360088 2888 Q6IN85 SMEK1 Serine/threonine-protein phosphatase 4 regulatory subunit 3A yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 65.695 61.629 3 2.5203E-13 72786 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 41.89 35.457 12268000 6834300 0 0 0 0 0 0 0 0 0 0 0 5434200 0 0 52642 2888 47247 442030;442031 349507;349508;349509 349509 3 TNLYQDDAVTGEAAGLALGLVMLGSK Unmodified 2606.3262 0.32616811 4011 Q99460 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 0 0 By MS/MS 2 0 1 1 102.03 93.899 3 2.2794E-38 120807 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 111.43 104.99 22737000 22737000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52643 4011 47248 442032 349510 349510 1 TNLYQDDAVTGEAAGLALGLVMLGSK Oxidation (M) 2622.3211 0.32108273 4011 Q99460 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 1 0 By MS/MS 2 0 1 1 98.867 96.44 3 4.4866E-05 116489 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 45.269 38.471 2185600 0 0 2185600 0 0 0 0 0 0 0 0 0 0 0 0 52644 4011 47248 442033 349511 349511 5505 1 TNMNTGFLDPSLDPLLSSSSAPTK Unmodified 2492.2105 0.21046965 3436 Q8NEZ4 KMT2C Histone-lysine N-methyltransferase 2C yes yes 0 0 0 By MS/MS 2 0 1 1 96.09 91.269 3 0.00019657 113123 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 49.186 35.455 16826000 0 16826000 0 0 0 0 0 0 0 0 0 0 0 0 0 52645 3436 47249 442034 349512;349513 349512 2 TNNDILSSCEIK Unmodified 1392.6555 0.65549416 3022 Q6ZWJ1 STXBP4 Syntaxin-binding protein 4 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS 8.4 3.2 1 4 1 1 1 1 1 52.634 51.647 2 0.00038583 65242 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 111.86 95.017 43042000 0 21767000 0 0 3686000 0 0 0 0 0 5352800 0 5252800 0 6983000 52646 3022 47250 442035;442036;442037;442038;442039 349514;349515;349516 349514 2 TNNPLPLEQR Unmodified 1180.62 0.62003536 4923 Q9UIA9 XPO7 Exportin-7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 47.214 47.297 2 0.043998 52197 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 38.804 21.331 67523000 0 0 0 4295300 3048400 9157500 6097800 5074400 0 9701100 8403300 0 0 7209600 14536000 52647 4923 47251 442040;442041;442042;442043;442044;442045;442046;442047;442048 349517;349518 349518 2 TNNVSEHEDTDK Unmodified 1387.5852 0.58516599 1720 P53618 COPB1 Coatomer subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 4 2 22 2 4 1 2 2 1 2 2 2 2 2 2 2 2 5.9686 5.3296 2;3 1.0611E-05 5197 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.19 96.865 1570800000 23732000 1425100000 0 11413000 9853900 22406000 2348100 11542000 8619700 8970600 8351300 941950 9727800 8762800 19112000 52648 1720 47252 442049;442050;442051;442052;442053;442054;442055;442056;442057;442058;442059;442060;442061;442062;442063;442064;442065;442066;442067;442068;442069;442070;442071;442072;442073;442074;442075;442076 349519;349520;349521;349522;349523;349524;349525;349526;349527;349528;349529;349530;349531;349532 349521 13 TNNVSEHEDTDKYR Unmodified 1706.7496 0.74960556 1720 P53618 COPB1 Coatomer subunit beta yes yes 0 0 1 By MS/MS By matching 10 0 2 1 1 10.155 10.561 3 0.021697 8642 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 24.191 11.83 3576100 0 0 0 0 0 0 0 0 0 0 1154800 0 0 0 2421300 52649 1720 47253 442077;442078 349533 349533 1 TNNYQLSDELRK Unmodified 1479.7318 0.73177065 2689 Q4V328 GRIPAP1 GRIP1-associated protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.403 41.581 3 0.029772 45480 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.511 18.793 104980000 0 0 0 5880500 5058800 5963000 5043300 4165000 6115500 12616000 9491600 12919000 8174400 6764400 22790000 52650 2689 47254 442079;442080;442081;442082;442083;442084;442085;442086;442087;442088;442089;442090 349534;349535;349536 349535 2 TNPEIQSTLR Unmodified 1157.6041 0.60405094 1310 P31944 CASP14 Caspase-14;Caspase-14 subunit p17, mature form;Caspase-14 subunit p10, mature form;Caspase-14 subunit p20, intermediate form;Caspase-14 subunit p8, intermediate form yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 37.929 38.026 2 0.0035119 42425 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 76.221 47.525 287290000 0 0 0 95534000 13247000 15457000 15162000 24887000 8543100 40816000 0 53663000 11358000 8620100 0 52651 1310 47255 442091;442092;442093;442094;442095;442096;442097;442098;442099;442100 349537;349538 349537 2 TNPEIQSTLRK Unmodified 1285.699 0.69901396 1310 P31944 CASP14 Caspase-14;Caspase-14 subunit p17, mature form;Caspase-14 subunit p10, mature form;Caspase-14 subunit p20, intermediate form;Caspase-14 subunit p8, intermediate form yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 3 24 1 1 1 2 2 2 2 2 2 2 2 2 2 2 2 28.956 28.601 2;3 0.00010958 30407 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 99.752 89.142 2392300000 33278000 19232000 8283300 1015700000 76869000 91713000 92940000 114680000 49012000 135860000 215210000 220380000 99104000 88377000 131740000 52652 1310 47256 442101;442102;442103;442104;442105;442106;442107;442108;442109;442110;442111;442112;442113;442114;442115;442116;442117;442118;442119;442120;442121;442122;442123;442124;442125;442126;442127 349539;349540;349541;349542;349543;349544;349545;349546;349547;349548;349549;349550;349551;349552;349553;349554;349555;349556;349557 349545 18 TNPEYIYAPLK Unmodified 1307.6762 0.67615325 265 O15226 NKRF NF-kappa-B-repressing factor yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 68.363 67.712 2 0.0070621 77782 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 54.982 34.775 90199000 0 41098000 0 0 4530800 6773100 5324100 0 1760700 11177000 9002300 0 10533000 0 0 52653 265 47257 442128;442129;442130;442131;442132;442133;442134;442135 349558;349559;349560 349558 3 TNPFPLLEDEDDLFTDQK Unmodified 2135.9899 0.98989541 2840;5195 Q641Q2;Q5SRD0;Q9Y4E1 FAM21A;FAM21D;FAM21C WASH complex subunit FAM21A;Putative WASH complex subunit FAM21;WASH complex subunit FAM21C no no 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 96.676 92.007 2 1.2343E-09 114672 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.96 117.18 56075000 18750000 33828000 3496500 0 0 0 0 0 0 0 0 0 0 0 0 52654 2840;5195 47258 442136;442137;442138;442139 349561;349562;349563 349561 3 TNPFSSSTNK Unmodified 1081.504 0.50400254 4684 Q9NVU7 SDAD1 Protein SDA1 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 25.117 20.914 2 0.0092283 27678 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.815 51.92 9387500 0 9387500 0 0 0 0 0 0 0 0 0 0 0 0 0 52655 4684 47259 442140 349564 349564 1 TNPGCPAEVR Unmodified 1099.508 0.50804206 2945 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.947 19.142 2 0.022318 18967 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 46.158 36.171 102110000 0 0 0 3467200 6624200 6216400 5000800 6154400 3637900 8755700 9070200 11807000 13458000 12974000 14947000 52656 2945 47260 442141;442142;442143;442144;442145;442146;442147;442148;442149;442150;442151;442152 349565;349566;349567;349568;349569 349567 5 TNPPLIQEK Unmodified 1038.571 0.5709599 1974 P78344 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.993 36.173 2 0.0032698 40331 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 93.162 71.634 3493800000 0 0 0 176960000 210770000 245320000 276500000 274990000 236140000 284820000 341930000 455770000 293200000 321270000 376100000 52657 1974 47261 442153;442154;442155;442156;442157;442158;442159;442160;442161;442162;442163;442164 349570;349571;349572;349573;349574;349575;349576;349577;349578;349579;349580;349581 349581 7 TNPSPTNPFSSDLQK Unmodified 1631.7791 0.77911477 1597 P49757 NUMB Protein numb homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.897 61.996 2 0.00024539 70809 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 77.185 52.393 71870000 0 0 0 2763000 3530100 6637800 4591200 3199300 5070900 8236400 7771300 6474200 9143600 4852100 9600100 52658 1597 47262 442165;442166;442167;442168;442169;442170;442171;442172;442173;442174;442175;442176 349582;349583;349584;349585;349586;349587;349588;349589;349590;349591;349592;349593;349594;349595 349583 13 TNPTIGPAPPPQGPTDK Unmodified 1686.8577 0.85769944 3110 Q7Z6B7 SRGAP1 SLIT-ROBO Rho GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 45.758 46.09 2 0.0042247 51888 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.774 39.908 16910000 0 0 0 0 0 3833800 0 0 0 3938900 3013900 3189500 0 2934000 0 52659 3110 47263 442177;442178;442179;442180;442181 349596;349597 349596 2 TNQDAMETLRR Unmodified 1333.6408 0.64084715 3521 Q8TEW0 PARD3 Partitioning defective 3 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.26 28.454 3 0.0024845 30347 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 44.299 32.38 90074000 0 0 0 6025000 3620600 7285300 4857500 5925500 6514400 7511400 11683000 9379400 7298600 6821400 13152000 52660 3521 47264 442182;442183;442184;442185;442186;442187;442188;442189;442190;442191;442192;442193 349598;349599;349600;349601;349602;349603 349601 6 TNQEHAALEAENSK Unmodified 1540.7118 0.71176349 1575 P49454 CENPF Centromere protein F yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 14.667 14.806 3 0.0065278 13571 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 31.42 18.002 45375000 0 0 0 5204500 2477600 3557800 4105300 2805700 3178800 6045900 7566100 2215800 4192600 4025000 0 52661 1575 47265 442194;442195;442196;442197;442198;442199;442200;442201;442202;442203;442204 349604;349605;349606;349607 349607 4 TNQELQEINR Unmodified 1243.6157 0.61567826 840 P07355;A6NMY6 ANXA2;ANXA2P2 Annexin A2;Putative annexin A2-like protein yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 2 1 1 1 1 1 1 2 31.548 31.769 2 1.1255E-120 34800 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 257.27 223.02 1223100000 0 0 0 265030000 95681000 74678000 70169000 116150000 43182000 77941000 84978000 141840000 74922000 66891000 111680000 52662 840 47266 442205;442206;442207;442208;442209;442210;442211;442212;442213;442214;442215;442216;442217;442218 349608;349609;349610;349611;349612;349613;349614;349615;349616;349617;349618;349619 349609 12 TNQELQEINRVYK Unmodified 1633.8424 0.84238373 840 P07355;A6NMY6 ANXA2;ANXA2P2 Annexin A2;Putative annexin A2-like protein yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 54.094 52.502 3 8.161E-07 59168 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 92.295 81.24 183640000 7652400 27813000 38805000 28846000 5166100 4627400 9775800 16692000 6756700 0 19674000 0 0 0 17833000 52663 840 47267 442219;442220;442221;442222;442223;442224;442225;442226;442227;442228;442229 349620;349621;349622;349623 349622 3 TNQEYCDWIK Unmodified 1355.5816 0.58160094 2821 Q5VVQ6 YOD1 Ubiquitin thioesterase OTU1 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 63.823 60.518 2 0.0037073 77216 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.111 85.73 31833000 0 29268000 0 2564600 0 0 0 0 0 0 0 0 0 0 0 52664 2821 47268 442230;442231 349624;349625 349624 2 TNQFSVTRHEK Unmodified 1345.6739 0.67386184 5089 Q9Y282 ERGIC3 Endoplasmic reticulum-Golgi intermediate compartment protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.961 14.124 3 0.026855 12730 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 36.847 21.46 61179000 0 0 0 3331400 3491900 2703600 3631000 3556400 3228400 5649400 5475100 7959000 7928000 7005500 7219000 52665 5089 47269 442232;442233;442234;442235;442236;442237;442238;442239;442240;442241;442242;442243 349626;349627 349626 2 TNQGIPELNASSVGMAK Oxidation (M) 1731.8461 0.84614848 1493 P46019 PHKA2 Phosphorylase b kinase regulatory subunit alpha, liver isoform yes yes 0 1 0 By MS/MS By matching By MS/MS 7.33 3.77 1 2 1 1 1 63.106 61.235 2 1.321E-06 77072 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.688 71.083 22725000 0 17758000 0 0 0 0 0 0 1760900 3206000 0 0 0 0 0 52666 1493 47270 442244;442245;442246 349628;349629;349630 349629 2350 3 TNQGIPELNASSVGMAK Unmodified 1715.8512 0.85123386 1493 P46019 PHKA2 Phosphorylase b kinase regulatory subunit alpha, liver isoform yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 70.55 70.743 2 0.00091857 80746 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.863 37.598 25420000 0 0 0 0 0 2098600 0 0 0 0 7743200 0 2028800 3691300 9858600 52667 1493 47270 442247;442248;442249;442250;442251 349631 349631 1 TNQGISELNASSVGMAK Oxidation (M) 1721.8254 0.82541304 1494 P46020 PHKA1 Phosphorylase b kinase regulatory subunit alpha, skeletal muscle isoform yes yes 0 1 0 By MS/MS 2 0 1 1 55.029 49.223 2 0.00037382 63653 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.588 59.646 7678600 0 7678600 0 0 0 0 0 0 0 0 0 0 0 0 0 52668 1494 47271 442252 349632 349632 2351 1 TNQIGTVNDR Unmodified 1116.5523 0.55234972 1728 P53990 IST1 IST1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 17.888 18.079 2 0.0091779 17707 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 58.246 31.109 53557000 0 0 0 5039200 1959900 5570300 2998100 2956900 0 5609300 4219900 6956000 5961000 4055400 8231300 52669 1728 47272 442253;442254;442255;442256;442257;442258;442259;442260;442261;442262;442263 349633;349634;349635;349636;349637 349637 5 TNQLQYMQNVVVK Unmodified 1563.8079 0.80791248 2493 Q15059 BRD3 Bromodomain-containing protein 3 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 77.364 72.589 2 1.7916E-08 90560 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 133.23 119.64 58664000 0 58664000 0 0 0 0 0 0 0 0 0 0 0 0 0 52670 2493 47273 442264;442265 349638;349639 349638 2 TNQTLQLK Unmodified 944.5291 0.52909508 387 O60244 MED14 Mediator of RNA polymerase II transcription subunit 14 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 28.107 28.199 2 0.029639 30159 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 56.014 11.247 49045000 0 0 0 6795700 5337600 0 4657100 0 0 6937900 9797500 0 8646100 6872900 0 52671 387 47274 442266;442267;442268;442269;442270;442271;442272 349640;349641;349642 349640 3 TNQVMSSMK Unmodified 1024.4682 0.46815109 3998 Q96T51 RUFY1 RUN and FYVE domain-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 26.148 21.924 2 0.0028254 28858 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.73 97.026 116090000 0 116090000 0 0 0 0 0 0 0 0 0 0 0 0 0 52672 3998 47275 442273 349643 349643 1 TNQYGILFK Unmodified 1082.576 0.57604528 4304 Q9GZS3 WDR61 WD repeat-containing protein 61;WD repeat-containing protein 61, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 68.973 68.624 2 0.0096665 78139 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 66.073 44.773 138340000 0 62547000 0 3232100 3283000 4359800 4497800 0 2726400 3989700 8305400 9925500 10157000 10062000 15256000 52673 4304 47276 442274;442275;442276;442277;442278;442279;442280;442281;442282;442283;442284;442285 349644;349645;349646;349647;349648;349649;349650;349651;349652 349652 9 TNQYGILFK Acetyl (Protein N-term) 1124.5866 0.58660996 4304 Q9GZS3 WDR61 WD repeat-containing protein 61;WD repeat-containing protein 61, N-terminally processed yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.21 3.43 1 2 11 3 1 1 1 1 1 1 1 1 1 1 1 85.228 84.652 1;2 0.00030914 99354 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 137.9 107.83 547650000 0 241440000 0 8620200 14143000 12783000 0 14438000 12014000 24152000 45728000 53733000 36852000 33279000 50470000 52674 4304 47276 442286;442287;442288;442289;442290;442291;442292;442293;442294;442295;442296;442297;442298;442299 349653;349654;349655;349656;349657;349658;349659;349660;349661;349662;349663;349664;349665 349660 12 TNREGLEYIPLR Unmodified 1459.7783 0.77832691 2527 Q15392 DHCR24 Delta(24)-sterol reductase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.92 65.007 3 0.00090399 74173 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.261 41.004 66494000 0 0 0 4966600 2697300 4385800 3968700 6974100 4645600 5436700 4350800 8320000 5478600 5780000 9489400 52675 2527 47277 442300;442301;442302;442303;442304;442305;442306;442307;442308;442309;442310;442311 349666;349667;349668;349669;349670;349671;349672;349673;349674;349675;349676;349677;349678;349679 349676 14 TNRPPLSLSR Unmodified 1139.6411 0.64110515 2133 Q07020 RPL18 60S ribosomal protein L18 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.996 36.176 3 2.3131E-68 39263 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 176.78 147.01 889060000 0 0 0 49506000 46981000 49610000 51064000 58899000 42253000 79924000 70562000 103090000 108590000 107810000 120770000 52676 2133 47278 442312;442313;442314;442315;442316;442317;442318;442319;442320;442321;442322;442323 349680;349681;349682;349683;349684;349685;349686;349687;349688;349689;349690;349691 349689 12 TNSAEVTPPVLSVMGEATPVSIEPR Unmodified 2580.3105 0.31051804 2958 Q6PJG2 ELMSAN1 ELM2 and SANT domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 92.081 92.201 3 9.1618E-06 106830 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.404 27.602 4337700 0 0 0 0 0 0 0 0 0 1546700 0 0 0 736330 2054700 52677 2958 47279 442324;442325;442326 349692;349693;349694 349693 3 TNSDSALHQSTMTPTQPESFSSGSQDVHQK Unmodified 3231.4375 0.43746248 2976 Q6UUV9 CRTC1 CREB-regulated transcription coactivator 1 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 48.289 48.621 4 2.4591E-11 54033 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 42.659 36.817 18263000 0 0 0 0 0 0 0 0 0 0 8174300 0 0 10088000 0 52678 2976 47280 442327;442328 349695 349695 1 TNSDSALHTSALSTK Unmodified 1531.7478 0.74781464 2975 Q6UUV7 CRTC3 CREB-regulated transcription coactivator 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 16 1 2 1 2 1 1 1 2 1 1 1 2 29.313 29.488 2;3 9.1627E-05 31358 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 71.08 56.289 271400000 0 0 0 12392000 9965700 13570000 19224000 15692000 15441000 20211000 31348000 29283000 29020000 23111000 52137000 52679 2975 47281 442329;442330;442331;442332;442333;442334;442335;442336;442337;442338;442339;442340;442341;442342;442343;442344 349696;349697;349698;349699;349700;349701;349702;349703;349704;349705;349706 349705 9 TNSGGGDGPHISSK Unmodified 1312.6008 0.60075648 3823 Q96EV2 RBM33 RNA-binding protein 33 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching 10 0 14 1 1 1 2 1 1 1 1 1 2 1 1 8.0784 8.2062 3 0.00038793 5874 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 56.514 50.481 81802000 0 0 0 6145400 3152500 2581700 6047200 4224800 4334400 5360700 12601000 10143000 13479000 3981800 9751200 52680 3823 47282 442345;442346;442347;442348;442349;442350;442351;442352;442353;442354;442355;442356;442357;442358 349707;349708 349708 1 TNSGISSASGGSTEPTTPDSERPAQALLR Unmodified 2886.3955 0.39552131 3187 Q86X10 RALGAPB Ral GTPase-activating protein subunit beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 60.585 60.763 3 2.4548E-26 69252 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.198 70.035 42877000 0 0 0 0 3436000 3904800 4141200 3425100 0 5061100 5292900 5245700 4334200 3135700 4900400 52681 3187 47283 442359;442360;442361;442362;442363;442364;442365;442366;442367;442368 349709;349710;349711;349712;349713;349714;349715;349716;349717 349716 9 TNSILFYGR Unmodified 1069.5556 0.55564418 1251;1545 P29508;P48594 SERPINB3;SERPINB4 Serpin B3;Serpin B4 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 65.339 65.482 2 0.005128 74630 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 82.75 70.846 607610000 0 0 0 350070000 0 23184000 23078000 31366000 14899000 38302000 34752000 31630000 24133000 15604000 20593000 52682 1251;1545 47284 442369;442370;442371;442372;442373;442374;442375;442376;442377;442378;442379 349718;349719;349720;349721;349722;349723;349724;349725;349726;349727 349721 10 TNSMGSATGPLPGTK Oxidation (M) 1433.682 0.68204326 240 O15014 ZNF609 Zinc finger protein 609 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 28.233 28.488 2 0.0041305 30770 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 41.242 26.091 17840000 0 0 0 0 2388300 0 2718600 2213300 0 0 0 3217900 3777200 0 3524900 52683 240 47285 442380;442381;442382;442383;442384;442385 349728 349728 327 1 TNSMSSSGLGSPNR Oxidation (M) 1409.6205 0.62050564 4779 Q9NZN8 CNOT2 CCR4-NOT transcription complex subunit 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.919 14.081 2 1.287E-17 13032 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 124.42 115.56 73862000 0 0 0 4051700 4882500 4358300 5192500 4201400 3588300 7893600 9258300 7501400 7579600 5008100 10346000 52684 4779 47286 442386;442387;442388;442389;442390;442391;442392;442393;442394;442395;442396;442397 349729;349730;349731;349732;349733;349734;349735;349736;349737;349738;349739;349740 349734 6150 12 TNSMSSSGLGSPNR Unmodified 1393.6256 0.62559102 4779 Q9NZN8 CNOT2 CCR4-NOT transcription complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 25.299 25.534 2 0.00062103 27470 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 65.241 45.464 50928000 0 0 0 0 3100700 4057000 3712200 0 4908200 6555600 4270200 10437000 0 4742400 9144800 52685 4779 47286 442398;442399;442400;442401;442402;442403;442404;442405;442406 349741;349742;349743;349744;349745;349746;349747 349741 7 TNSPGFQK Unmodified 877.42938 0.42938104 2786 Q5T8P6 RBM26 RNA-binding protein 26 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 13.312 13.417 2 0.0068825 12614 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 92.47 61.167 161580000 0 0 0 6416600 16560000 19487000 20809000 13945000 16505000 14463000 13082000 0 22556000 17751000 0 52686 2786 47287 442407;442408;442409;442410;442411;442412;442413;442414;442415;442416 349748;349749;349750;349751;349752;349753;349754;349755 349755 3 TNSQFLSGPQK Unmodified 1205.6041 0.60405094 2853 Q68CQ4 DIEXF Digestive organ expansion factor homolog yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 40.095 34.249 2 0.0070028 44539 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.533 69.2 49547000 3175000 46372000 0 0 0 0 0 0 0 0 0 0 0 0 0 52687 2853 47288 442417;442418 349756 349756 1 TNSSDSERSPDLGHSTQIPR Unmodified 2183.0203 0.02030111 2988 Q6VY07 PACS1 Phosphofurin acidic cluster sorting protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 35.825 36.065 4 0.0094206 38566 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 30.288 24.709 83740000 0 0 0 0 6490600 9174100 5910700 6196700 0 13868000 8054200 7563000 0 13691000 12792000 52688 2988 47289 442419;442420;442421;442422;442423;442424;442425;442426;442427 349757;349758;349759 349758 3 TNSSDSERSPDLGHSTQIPRK Unmodified 2311.1153 0.11526413 2988 Q6VY07 PACS1 Phosphofurin acidic cluster sorting protein 1 yes yes 0 0 2 By matching By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 28.216 28.377 4 0.012838 29679 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 27.495 17.073 48772000 0 0 0 0 2844300 5436000 5035200 4095200 2569600 9839500 0 0 7111600 5595400 6245300 52689 2988 47290 442428;442429;442430;442431;442432;442433;442434;442435;442436 349760 349760 1 TNSSSNDLEVEDR Unmodified 1464.6328 0.63284447 3256 Q8IX90 SKA3 Spindle and kinetochore-associated protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 25.749 26.017 2 1.0134E-08 26400 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 109.6 99.075 28772000 0 0 0 0 3381600 4148800 0 0 4282500 0 4527200 6435300 0 0 5996400 52690 3256 47291 442437;442438;442439;442440;442441;442442;442443;442444 349761;349762;349763;349764;349765;349766;349767;349768 349766 7 TNSTFNQVVLK Unmodified 1249.6667 0.6666512 2133 Q07020 RPL18 60S ribosomal protein L18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.151 55.282 2 0.00063875 63508 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 90.629 70.3 437940000 0 0 0 22749000 23413000 22495000 26362000 28190000 16346000 42196000 44830000 55789000 47543000 49588000 58434000 52691 2133 47292 442445;442446;442447;442448;442449;442450;442451;442452;442453;442454;442455;442456 349769;349770;349771;349772;349773;349774;349775;349776;349777;349778;349779;349780 349780 12 TNSTFNQVVLKR Unmodified 1405.7678 0.76776222 2133 Q07020 RPL18 60S ribosomal protein L18 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 47.061 47.18 3 0.027 53139 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 29.071 21.347 22680000 0 0 0 0 2763900 0 2687300 0 0 4514500 4291900 0 5382500 3040000 0 52692 2133 47293 442457;442458;442459;442460;442461;442462 349781 349781 1 TNTDQENRLESVPQALTGLPK Unmodified 2310.1816 0.18155278 5193 Q9Y4C1 KDM3A Lysine-specific demethylase 3A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 2 1 1 1 77.447 77.493 3 1.4137E-05 89244 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 55.763 48.141 168090000 0 0 0 3335600 9705300 15699000 8471300 18141000 14278000 21849000 21399000 0 12213000 14807000 28188000 52693 5193 47294 442463;442464;442465;442466;442467;442468;442469;442470;442471;442472;442473;442474;442475 349782;349783;349784;349785;349786;349787;349788;349789;349790 349783 9 TNTLAVTGGEDDK Unmodified 1319.6205 0.62048887 2341 Q13685 AAMP Angio-associated migratory cell protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 28.578 28.779 2 1.0876E-06 30027 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 111.63 93.318 33414000 0 0 0 0 2758400 0 2607900 0 2172700 2982500 7729800 0 0 4278500 10884000 52694 2341 47295 442476;442477;442478;442479;442480;442481;442482;442483 349791;349792 349792 2 TNTPQGVLPSSQLK Unmodified 1468.7886 0.78855725 2360 Q14004 CDK13 Cyclin-dependent kinase 13 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 53.853 54.091 2 0.0063659 61338 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 43.544 27.29 41045000 0 0 0 0 2367500 4149000 0 3395000 0 0 4750600 8399200 6814900 6124300 5044900 52695 2360 47296 442484;442485;442486;442487;442488;442489;442490;442491 349793;349794;349795 349795 3 TNVALMCMLR Unmodified 1207.5876 0.58755471 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 0 By MS/MS 10 0 1 1 80.09 80.28 2 0.01862 92807 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 48.283 20.954 2138000 0 0 0 0 0 0 0 2138000 0 0 0 0 0 0 0 52696 528 47297 442492 349796 349796 1 TNVFAPDYIAGVSPFVENDISSR Unmodified 2497.2125 0.21251856 5010 Q9ULX3 NOB1 RNA-binding protein NOB1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 93.046 93.175 3 0.00076919 108265 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 33.909 29.881 5402000 0 0 0 0 0 0 0 0 0 2696300 0 0 0 0 2705700 52697 5010 47298 442493;442494 349797;349798 349797 2 TNVLGHLQQGGAPTPFDR Unmodified 1906.965 0.96495848 1063 P17858 PFKL ATP-dependent 6-phosphofructokinase, liver type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 1 1 2 1 1 1 1 1 2 2 70.795 70.906 2;3 4.6319E-08 80854 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.729 66.787 388980000 0 0 0 7917300 13255000 42686000 16602000 32200000 18275000 37835000 29032000 40095000 29643000 37135000 84308000 52698 1063 47299 442495;442496;442497;442498;442499;442500;442501;442502;442503;442504;442505;442506;442507;442508;442509 349799;349800;349801;349802;349803;349804;349805;349806;349807;349808;349809;349810 349803 12 TNVLGHLQQGGAPTPFDRNYGTK Unmodified 2470.2353 0.23531968 1063 P17858 PFKL ATP-dependent 6-phosphofructokinase, liver type yes yes 0 0 1 By MS/MS 10 0 1 1 67.409 67.927 3 1.3075E-05 77199 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.266 35.791 20156000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20156000 52699 1063 47300 442510 349811 349811 1 TNVVQAAIAR Unmodified 1041.5931 0.59309232 5102 Q9Y2H2 INPP5F Phosphatidylinositide phosphatase SAC2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 48.131 48.611 2 0.01862 54225 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.283 20.109 40584000 0 0 0 0 0 0 0 5559400 0 0 9415700 8022200 6332600 0 11254000 52700 5102 47301 442511;442512;442513;442514;442515 349812;349813;349814;349815 349815 4 TNVVTMPTAHPR Unmodified 1322.6765 0.67650438 2289 Q13428 TCOF1 Treacle protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 38.274 38.453 2;3 0.0028304 41256 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.52 44.889 505470000 0 0 0 27142000 26272000 28950000 29381000 31430000 27600000 45941000 63978000 57995000 43361000 45401000 78015000 52701 2289 47302 442516;442517;442518;442519;442520;442521;442522;442523;442524;442525;442526;442527;442528;442529;442530;442531;442532;442533;442534;442535;442536;442537;442538;442539 349816;349817;349818;349819;349820;349821;349822;349823;349824;349825;349826;349827;349828;349829 349819 8 TNYEGPYYICK Unmodified 1406.6177 0.61765209 3243 Q8IWR0 ZC3H7A Zinc finger CCCH domain-containing protein 7A yes yes 0 0 0 By MS/MS 2 0 1 1 59.07 53.227 2 0.024195 68647 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.465 51.079 24567000 0 24567000 0 0 0 0 0 0 0 0 0 0 0 0 0 52702 3243 47303 442540 349830 349830 0 TNYNDRYDEIR Unmodified 1457.6535 0.65352033 1900 P62424 RPL7A 60S ribosomal protein L7a yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 31.244 31.632 3 0.0018 33359 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.951 39.365 62406000 0 0 0 0 0 8817900 5761300 0 0 0 10781000 21664000 0 0 15382000 52703 1900 47304 442541;442542;442543;442544;442545 349831;349832;349833 349832 3 TNYNDRYDEIRR Unmodified 1613.7546 0.75463136 1900 P62424 RPL7A 60S ribosomal protein L7a yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 2 1 2 2 27.243 27.434 3;4 0.035164 29698 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 45.257 37.346 671810000 0 0 0 20118000 27848000 68023000 34283000 42261000 46026000 54051000 60619000 68183000 48655000 101660000 100080000 52704 1900 47305 442546;442547;442548;442549;442550;442551;442552;442553;442554;442555;442556;442557;442558;442559;442560;442561;442562;442563;442564;442565;442566;442567;442568 349834;349835;349836 349836 1 TNYVVWGTGK Unmodified 1123.5662 0.56620887 2916 Q6P1J9 CDC73 Parafibromin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 58.239 57.03 2 0.00090415 65592 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 115.82 93.112 184020000 78203000 0 0 12611000 12914000 0 18719000 13807000 0 18015000 0 29745000 0 0 0 52705 2916 47306 442569;442570;442571;442572;442573;442574;442575 349837;349838;349839;349840;349841;349842;349843;349844;349845 349845 8 TPAAAAAMNLASPR Oxidation (M) 1356.682 0.68198369 5066 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 2 1 1 1 2 1 2 2 1 3 1 42.873 42.999 2;3 3.7078E-15 48300 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 117.86 94.009 143500000 0 0 0 12975000 9879400 4832800 12115000 14666000 5835300 21167000 15920000 0 9001700 25798000 11315000 52706 5066 47307 442576;442577;442578;442579;442580;442581;442582;442583;442584;442585;442586;442587;442588;442589;442590;442591;442592 349846;349847;349848;349849;349850;349851;349852;349853;349854;349855;349856;349857;349858 349853 6428 11 TPAAAAAMNLASPR Unmodified 1340.6871 0.68706906 5066 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 14 2 2 2 1 2 1 1 1 1 1 59.238 59.251 2;3 8.3424E-17 67485 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 123.26 83.012 169660000 0 0 0 18382000 14093000 0 19027000 0 7097900 24849000 16281000 20708000 14797000 14512000 19910000 52707 5066 47307 442593;442594;442595;442596;442597;442598;442599;442600;442601;442602;442603;442604;442605;442606 349859;349860;349861;349862;349863;349864;349865 349860 6 TPAALAALSLTGSGTPPTAANYPSSSR Unmodified 2558.2976 0.29764517 5066 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 84.149 84.255 3 5.9573E-100 97555 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 125.62 122.58 181370000 0 0 0 0 10348000 8637200 7068700 14253000 8880000 20166000 22328000 26517000 10130000 13186000 39860000 52708 5066 47308 442607;442608;442609;442610;442611;442612;442613;442614;442615;442616;442617 349866;349867;349868;349869;349870;349871;349872;349873;349874;349875;349876;349877;349878;349879 349867 14 TPADCPVIAIDSFR Unmodified 1560.7606 0.76062794 4123 Q9BS26 ERP44 Endoplasmic reticulum resident protein 44 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 81.597 81.178 2 1.4946E-11 94322 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 99.215 91.57 3359600 0 0 0 3359600 0 0 0 0 0 0 0 0 0 0 0 52709 4123 47309 442618;442619;442620 349880;349881;349882 349881 3 TPADGGSVDLPPVGHDELSR Unmodified 2017.9705 0.97049737 3801 Q96DT7 ZBTB10 Zinc finger and BTB domain-containing protein 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 64.171 64.217 3 0.0011971 72650 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.825 31.638 82785000 0 0 0 5647800 6993200 7434300 7230400 0 5852500 8177600 8424100 0 9760900 12178000 11086000 52710 3801 47310 442621;442622;442623;442624;442625;442626;442627;442628;442629;442630 349883;349884;349885;349886 349883 4 TPADTGFAFPDWAYKPESSPGSR Unmodified 2483.1394 0.13935361 1628 P50548 ERF ETS domain-containing transcription factor ERF yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 83.507 83.655 3 1.5012E-86 96639 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 153.56 146.91 30943000 0 0 0 0 0 3141500 0 8187900 6974700 0 0 0 0 0 12639000 52711 1628 47311 442631;442632;442633;442634 349887;349888;349889;349890 349888 2 TPAEQLLSK Unmodified 985.54441 0.5444108 494 O75400 PRPF40A Pre-mRNA-processing factor 40 homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42.89 42.372 2 9.6704E-09 46421 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 161.27 132.12 2764900000 0 371480000 8458200 119510000 111060000 117350000 187240000 151470000 172770000 232190000 251390000 248850000 265330000 217520000 310260000 52712 494 47312 442635;442636;442637;442638;442639;442640;442641;442642;442643;442644;442645;442646;442647;442648 349891;349892;349893;349894;349895;349896;349897;349898;349899;349900;349901;349902;349903;349904;349905;349906;349907 349903 15 TPAFAESVTEGDVRWEK Unmodified 1920.9218 0.92175626 1385 P36957 DLST Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial yes yes 0 0 1 By matching By MS/MS 2 0 2 1 1 76.452 72.64 3 0.0042838 88101 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 46.156 31.001 29556000 0 26226000 3330100 0 0 0 0 0 0 0 0 0 0 0 0 52713 1385 47313 442649;442650 349908;349909 349908 2 TPAGNFVTLEEGK Unmodified 1361.6827 0.68269519 1481 P43490 NAMPT Nicotinamide phosphoribosyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.844 62.02 2 3.589E-09 70012 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 140.57 118.48 109130000 0 0 0 0 3484500 12820000 0 4666700 8906200 9047900 13976000 10812000 5305700 10295000 29815000 52714 1481 47314 442651;442652;442653;442654;442655;442656;442657;442658;442659;442660;442661;442662 349910;349911;349912;349913;349914;349915;349916;349917;349918;349919;349920;349921;349922 349914 13 TPAILYTYSGLR Unmodified 1353.7293 0.72925145 3357 Q8N684 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.713 78.77 2 2.6872E-08 90678 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 126.39 120.43 431210000 0 0 0 13873000 31515000 23460000 25373000 46309000 20981000 38164000 38289000 52474000 25052000 31079000 84645000 52715 3357 47315 442663;442664;442665;442666;442667;442668;442669;442670;442671;442672;442673;442674 349923;349924;349925;349926 349923 0 TPAIPTAVNLADSR Unmodified 1424.7623 0.7623425 5066 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.476 72.546 2 0.00035143 83652 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 83.397 70.043 607940000 0 0 0 32683000 45588000 39400000 55701000 50508000 38652000 52774000 65071000 70185000 32053000 56152000 69171000 52716 5066 47316 442675;442676;442677;442678;442679;442680;442681;442682;442683;442684;442685;442686 349927;349928;349929;349930;349931;349932;349933;349934;349935;349936;349937;349938 349938 12 TPALANEEALQK Unmodified 1283.6721 0.67213051 2526 Q15390 MTFR1 Mitochondrial fission regulator 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 43.431 43.706 2 6.6986E-05 48490 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 113.27 84.543 55026000 0 0 0 5861500 0 0 0 0 0 9306900 0 20447000 0 8058100 11352000 52717 2526 47317 442687;442688;442689;442690;442691 349939;349940;349941;349942 349941 4 TPALIVYGDQDPMGQTSFEHLK Oxidation (M) 2462.1788 0.17877559 3882 Q96IU4 ABHD14B Alpha/beta hydrolase domain-containing protein 14B yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 6 4 3 3 1 1 1 1 1 1 79.525 77.017 3 4.7061E-96 94205 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 166.61 164.33 129420000 13719000 16557000 45605000 0 0 14881000 0 0 0 14657000 0 0 0 0 24003000 52718 3882 47318 442692;442693;442694;442695;442696;442697 349943;349944;349945;349946;349947;349948;349949 349949 5388 7 TPALIVYGDQDPMGQTSFEHLK Unmodified 2446.1839 0.18386096 3882 Q96IU4 ABHD14B Alpha/beta hydrolase domain-containing protein 14B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6 4 3 3 1 1 1 1 1 1 84.592 82.122 3 3.2637E-32 100085 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 116.27 107.88 126140000 18931000 49509000 30745000 0 0 0 0 3875100 0 0 4170700 0 0 0 18908000 52719 3882 47318 442698;442699;442700;442701;442702;442703 349950;349951;349952;349953;349954 349953 5 TPALVFEHVNNTDFK Unmodified 1730.8628 0.86278482 1964 P68400;Q8NEV1 CSNK2A1;CSNK2A3 Casein kinase II subunit alpha;Casein kinase II subunit alpha 3 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 2 2 2 74.135 72.972 2;3 8.6053E-11 84198 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 97.734 83.315 69123000 34740000 0 0 0 0 0 0 0 0 0 6613000 8138300 4327000 4295600 11010000 52720 1964 47319 442704;442705;442706;442707;442708;442709;442710;442711;442712 349955;349956;349957;349958;349959;349960;349961 349958 7 TPALVFEYINNTDFK Unmodified 1770.8829 0.88285156 1094 P19784 CSNK2A2 Casein kinase II subunit alpha' yes yes 0 0 0 By MS/MS 2 0 2 2 96.507 88.377 2;3 1.7073E-148 114169 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 297.83 290.57 81326000 81326000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52721 1094 47320 442713;442714 349962;349963 349963 2 TPALVNAAVTYSK Unmodified 1333.7242 0.72416608 567 O75964 ATP5L ATP synthase subunit g, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 73.613 65.417 2 0.0048564 86648 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.385 53.178 5724500 5724500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52722 567 47321 442715 349964 349964 1 TPAPATTTSHNPLANILSK Unmodified 1933.0269 0.026890038 2810 Q5VT52 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.889 75.951 3 2.7516E-54 87562 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 150.98 136.94 841980000 0 0 0 25788000 34387000 67197000 54528000 71203000 72123000 83768000 79207000 113830000 62583000 63001000 114370000 52723 2810 47322 442716;442717;442718;442719;442720;442721;442722;442723;442724;442725;442726;442727 349965;349966;349967;349968;349969;349970;349971;349972;349973;349974;349975;349976;349977 349966 13 TPAPPAGPGGTL Unmodified 1034.5397 0.53965977 4720 Q9NX70 MED29 Mediator of RNA polymerase II transcription subunit 29 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.71 3.15 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62.929 63.476 2 2.4207E-05 95875 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 107.57 91.933 135560000 6550900 14509000 0 6218900 7069700 8620000 9699700 6600700 5426500 11881000 12268000 13654000 9940000 9555500 13562000 52724 4720 47323 442728;442729;442730;442731;442732;442733;442734;442735;442736;442737;442738;442739;442740;442741 349978;349979;349980;349981;349982;349983 349982 6 TPAQFDADELR Unmodified 1261.5939 0.59388018 773 P04083 ANXA1 Annexin A1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 53.442 53.664 2 1.0392E-12 60698 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 140.16 122.65 298820000 0 0 0 26314000 0 0 31441000 35784000 0 0 37213000 39906000 32065000 24728000 71367000 52725 773 47324 442742;442743;442744;442745;442746;442747;442748;442749;442750;442751;442752;442753 349984;349985;349986;349987;349988;349989;349990;349991;349992;349993;349994;349995;349996;349997 349991 13 TPAQFDADELRAAMK Unmodified 1662.8036 0.80355538 773 P04083 ANXA1 Annexin A1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.05 3.77 6 2 13 2 4 2 1 1 1 1 1 1 1 1 1 1 1 2 73.115 71.339 2;3 2.8763E-186 90392 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 249.04 200.04 3729600000 409100000 2232500000 866660000 6928700 3419200 10826000 8054400 26088000 5664600 12986000 19096000 23778000 11914000 15793000 76723000 52726 773 47325 442754;442755;442756;442757;442758;442759;442760;442761;442762;442763;442764;442765;442766;442767;442768;442769;442770;442771;442772;442773;442774 349998;349999;350000;350001;350002;350003;350004;350005;350006;350007;350008;350009;350010;350011;350012;350013;350014;350015;350016;350017;350018;350019;350020 350003 23 TPAQFDADELRAAMK Oxidation (M) 1678.7985 0.79847001 773 P04083 ANXA1 Annexin A1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.19 3.94 13 2 16 4 6 5 1 2 1 2 2 1 1 1 1 1 2 1 58.026 55.326 2;3 2.8338E-69 69245 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 215.51 192.97 1990500000 186110000 821190000 825400000 9046400 9563100 5628800 23589000 24380000 5102000 6644400 10757000 16409000 10945000 16191000 19537000 52727 773 47325 442775;442776;442777;442778;442779;442780;442781;442782;442783;442784;442785;442786;442787;442788;442789;442790;442791;442792;442793;442794;442795;442796;442797;442798;442799;442800;442801;442802;442803;442804;442805 350021;350022;350023;350024;350025;350026;350027;350028;350029;350030;350031;350032;350033;350034;350035;350036;350037;350038;350039;350040;350041;350042 350042 930 20 TPAQSGAWDPNNPNTPSR Unmodified 1908.8715 0.87145203 136 O00267 SUPT5H Transcription elongation factor SPT5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.47 41.648 2 1.4407E-37 46235 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 162.93 156.27 100710000 0 0 0 4370600 5205600 5556200 6724900 4443300 4840700 8755100 13350000 11002000 10586000 9166600 16710000 52728 136 47326 442806;442807;442808;442809;442810;442811;442812;442813;442814;442815;442816;442817 350043;350044;350045;350046;350047;350048;350049;350050;350051;350052;350053;350054 350048 12 TPAQYDASELK Unmodified 1221.5877 0.58773217 840 P07355;A6NMY6 ANXA2;ANXA2P2 Annexin A2;Putative annexin A2-like protein yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.28 3.87 2 3 1 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 44.959 44.319 2 8.3028E-16 40135 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 184.71 184.71 2873300000 141890000 1073900000 5215300 329870000 70067000 89510000 97897000 169410000 52691000 92913000 112930000 175830000 115460000 146900000 198810000 52729 840 47327 442818;442819;442820;442821;442822;442823;442824;442825;442826;442827;442828;442829;442830;442831;442832;442833;442834;442835 350055;350056;350057;350058;350059;350060;350061;350062;350063;350064;350065;350066;350067;350068;350069;350070 350057 14 TPASGLQTPTSTPAPGSATR Unmodified 1896.9541 0.95411902 3795 Q96DF8 DGCR14 Protein DGCR14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 46.247 46.499 2 2.1667E-66 51389 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 185.87 174.66 67056000 0 0 0 0 6784200 4852600 5642000 0 0 6008000 10375000 11663000 5389000 7726200 8616700 52730 3795 47328 442836;442837;442838;442839;442840;442841;442842;442843;442844;442845 350071;350072;350073;350074;350075;350076;350077;350078;350079;350080 350074 10 TPASINATPANINLADLTR Unmodified 1952.0327 0.032703697 3038 Q7KZ85 SUPT6H Transcription elongation factor SPT6 yes yes 0 0 0 By MS/MS 10 0 1 1 83.796 83.986 2 1.8709E-10 97008 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.55 85.012 4888400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4888400 52731 3038 47329 442846 350081 350081 0 TPASPVVHIR Unmodified 1075.6138 0.61382777 1008 P14866 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.768 36.95 2 0.0013827 39327 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107 85.713 213700000 0 0 0 9340200 5992400 16607000 15437000 14428000 9892300 20200000 19933000 26149000 23060000 16124000 36535000 52732 1008 47330 442847;442848;442849;442850;442851;442852;442853;442854;442855;442856;442857;442858 350082;350083;350084;350085;350086 350082 5 TPASTPVSGTPQASPMIER Unmodified 1925.9517 0.95167618 4906 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 57.1 57.382 2 2.8395E-53 64482 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 148.68 127.05 28547000 0 0 0 0 0 4507200 0 0 0 5008400 5573000 0 0 3728400 9729600 52733 4906 47331 442859;442860;442861;442862;442863 350087;350088;350089;350090 350088 4 TPASTPVSGTPQASPMIER Oxidation (M) 1941.9466 0.94659081 4906 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 yes yes 0 1 0 By MS/MS 10 0 1 1 48.38 48.815 2 0.00025252 54917 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 42.789 37.182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52734 4906 47331 442864 350091 350091 6262 1 TPATAPVPAR Unmodified 979.54508 0.5450795 1082 P18887 XRCC1 DNA repair protein XRCC1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.061 26.261 2 0.0048055 28077 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 71.501 54.208 37394000 0 0 0 2726400 2729400 3335400 3652200 2525400 1926600 3031300 3020000 5343900 1839600 2807900 4455600 52735 1082 47332 442865;442866;442867;442868;442869;442870;442871;442872;442873;442874;442875;442876 350092;350093;350094;350095;350096;350097;350098;350099;350100;350101;350102 350094 11 TPATTPEAR Unmodified 942.47706 0.47705951 3465 Q8NI27 THOC2 THO complex subunit 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.72 2 13 1 1 1 1 1 2 1 1 1 1 1 1 1 1 11.067 10.692 2 0.0043294 9626 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 87.181 69.146 195130000 4423500 39297000 0 9219400 8647100 12120000 12204000 10644000 9453100 11564000 10354000 17002000 16767000 15783000 17647000 52736 3465 47333 442877;442878;442879;442880;442881;442882;442883;442884;442885;442886;442887;442888;442889;442890;442891 350103;350104;350105;350106;350107;350108;350109;350110;350111;350112;350113 350113 9 TPATTPEARVLGK Unmodified 1339.746 0.74596415 3465 Q8NI27 THOC2 THO complex subunit 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 42.834 37.626 3 0.011262 47292 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 67.997 53.551 538410000 431750000 66177000 40488000 0 0 0 0 0 0 0 0 0 0 0 0 52737 3465 47334 442892;442893;442894 350114;350115 350115 0 TPAVEGLTEAEEEELR Unmodified 1771.8476 0.84758827 325 O43399 TPD52L2 Tumor protein D54 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 74.401 74.49 2 1.1887E-19 85951 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 109.6 94.228 21706000 0 0 0 0 3099300 0 0 0 0 0 0 6990300 0 4194800 7421100 52738 325 47335 442895;442896;442897;442898 350116;350117;350118;350119 350118 4 TPAVEGLTEAEEEELRAELTK Unmodified 2314.154 0.15400062 325 O43399 TPD52L2 Tumor protein D54 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.42 3.66 3 1 8 2 1 1 1 1 1 1 1 1 1 1 85.846 84.771 3 1.5721E-97 98095 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 172.81 165.23 172700000 17632000 2107600 3070100 0 3527500 0 0 9095900 5871800 34309000 22801000 10348000 0 8052600 55884000 52739 325 47336 442899;442900;442901;442902;442903;442904;442905;442906;442907;442908;442909;442910 350120;350121;350122;350123;350124;350125;350126;350127;350128;350129;350130;350131;350132;350133;350134 350122 14 TPCEEILVK Unmodified 1087.5583 0.5583463 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 48.978 48.45 2 0.003237 55060 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 90.709 60.524 19320000 0 0 0 0 19320000 0 0 0 0 0 0 0 0 0 0 52740 1124 47337 442911;442912 350135;350136 350136 2 TPCNAGTFSQPEK Unmodified 1435.6402 0.64017845 355 O43684 BUB3 Mitotic checkpoint protein BUB3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.139 29.332 2 4.2398E-215 30415 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 240.8 232.58 2262700000 0 0 0 115400000 77674000 82707000 153090000 105660000 139990000 167080000 290670000 207230000 160500000 238760000 523950000 52741 355 47338 442913;442914;442915;442916;442917;442918;442919;442920;442921;442922;442923;442924 350137;350138;350139;350140;350141;350142;350143;350144;350145;350146;350147;350148 350144 12 TPDDDPEQGK Unmodified 1100.4622 0.46219731 2195 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching 10 0 5 1 1 1 1 1 8.0254 8.1308 2 0.037339 6424 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 40.882 30.468 8164600 0 0 0 0 563000 2181300 0 1262600 0 0 0 0 2200300 0 1957400 52742 2195 47339 442925;442926;442927;442928;442929 350149 350149 1 TPDDFLNSVDEMDTGDTINQSTLPSQQNR Oxidation (M) 3253.4317 0.4317084 1516 P46937 YAP1 Transcriptional coactivator YAP1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 79.612 79.775 3 3.152E-62 91887 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.78 105 81888000 0 0 0 0 0 0 0 0 5066200 13825000 9927800 23079000 0 7905600 22084000 52743 1516 47340 442930;442931;442932;442933;442934;442935 350150;350151;350152;350153;350154;350155;350156 350152 2397 7 TPDDFLNSVDEMDTGDTINQSTLPSQQNR Unmodified 3237.4368 0.43679378 1516 P46937 YAP1 Transcriptional coactivator YAP1 yes yes 0 0 0 By MS/MS 10 0 1 1 84.677 84.856 3 5.197E-61 97998 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 106.51 102.75 9234600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9234600 52744 1516 47340 442936 350157;350158 350158 2 TPDEIMSGR Oxidation (M) 1020.4546 0.45460951 1432 P41212 ETV6 Transcription factor ETV6 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 15.376 15.538 2 0.026756 15117 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 44.349 35.577 24975000 0 0 0 1929700 1059800 0 2775100 1810700 1462100 1853800 3265100 4786900 3608600 2423200 0 52745 1432 47341 442937;442938;442939;442940;442941;442942;442943;442944;442945;442946 350159;350160;350161 350161 3 TPDGGHSSQEIK Unmodified 1254.584 0.58404378 2850 Q684P5 RAP1GAP2 Rap1 GTPase-activating protein 2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 9.6029 6.2943 2 0.0075107 9055 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.704 44.964 14734000 0 14734000 0 0 0 0 0 0 0 0 0 0 0 0 0 52746 2850 47342 442947;442948 350162 350162 1 TPDGQGLSTYK Unmodified 1165.5615 0.56151742 2828 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 29.846 29.367 2 3.1935E-05 39191 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 120.45 104.57 648880000 0 510510000 0 6595400 7239400 12471000 7789400 9415900 5156300 14874000 12624000 14228000 8686100 14780000 24507000 52747 2828 47343 442949;442950;442951;442952;442953;442954;442955;442956;442957;442958;442959;442960;442961;442962;442963 350163;350164;350165;350166;350167;350168;350169;350170;350171;350172;350173;350174;350175;350176;350177;350178 350171 16 TPDGQYIYR Unmodified 1111.5298 0.52982336 3559 Q8WVB6 CHTF18 Chromosome transmission fidelity protein 18 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.552 37.732 2 0.0028761 41732 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 136.11 111.19 135550000 0 0 0 8526700 8548900 11067000 10322000 11580000 7105800 14887000 13222000 14855000 12385000 8769200 14280000 52748 3559 47344 442964;442965;442966;442967;442968;442969;442970;442971;442972;442973;442974;442975 350179;350180;350181;350182;350183;350184;350185;350186;350187;350188;350189;350190 350180 12 TPDIDVPK Unmodified 883.4651 0.46509784 2734 Q5JSH3 WDR44 WD repeat-containing protein 44 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 47.004 41.794 2 0.011882 51803 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 107.9 42.223 914550000 0 914550000 0 0 0 0 0 0 0 0 0 0 0 0 0 52749 2734 47345 442976;442977 350191;350192;350193 350193 3 TPDLSNQNSSDQANEEWETASESSDFNERR Unmodified 3442.4418 0.44175582 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 64.388 64.532 3 3.5423E-126 73892 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 136.53 131.21 57050000 0 0 0 0 4530900 6447600 0 3562100 10928000 7505400 0 12081000 0 3717200 8277200 52750 5216 47346 442978;442979;442980;442981;442982;442983;442984;442985 350194;350195;350196;350197;350198;350199;350200;350201;350202 350201 9 TPDSFEESQGEEIGK Unmodified 1651.7213 0.72132512 2833 Q5VZK9 LRRC16A Leucine-rich repeat-containing protein 16A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 44.493 43.293 2 0 53997 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 282.92 277.36 305740000 6443900 134350000 0 14213000 10189000 15574000 11032000 10423000 13683000 23330000 15284000 0 16849000 10993000 23369000 52751 2833 47347 442986;442987;442988;442989;442990;442991;442992;442993;442994;442995;442996;442997;442998;442999 350203;350204;350205;350206;350207;350208;350209;350210;350211;350212;350213;350214;350215;350216 350206 14 TPDSFEESQGEEIGKVER Unmodified 2035.9334 0.93344316 2833 Q5VZK9 LRRC16A Leucine-rich repeat-containing protein 16A yes yes 0 0 1 By MS/MS 10 0 1 1 50.225 50.284 3 0.00095234 56897 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 47.705 38.174 5674200 0 0 0 0 0 0 5674200 0 0 0 0 0 0 0 0 52752 2833 47348 443000 350217 350217 1 TPDSGHVSQEPK Unmodified 1280.5997 0.59969384 1523 P47736 RAP1GAP Rap1 GTPase-activating protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 10.509 7.1908 3 0.028809 10430 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 34 26.22 14220000 0 14220000 0 0 0 0 0 0 0 0 0 0 0 0 0 52753 1523 47349 443001;443002 350218 350218 1 TPDTPNNDPR Unmodified 1125.5051 0.50506518 2604 Q16513 PKN2 Serine/threonine-protein kinase N2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 2 1 1 1 1 1 1 1 11.155 11.3 2 0.0016376 10042 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 89.698 69.178 126290000 0 0 0 12119000 5972600 13377000 10565000 9263100 7487900 10172000 7650500 12320000 13249000 10116000 14001000 52754 2604 47350 443003;443004;443005;443006;443007;443008;443009;443010;443011;443012;443013;443014;443015 350219;350220;350221;350222;350223;350224;350225;350226 350226 8 TPEAREAPATQASSTTQLTDTQVLAAENK Unmodified 3028.4949 0.49490101 5031 Q9UNF1 MAGED2 Melanoma-associated antigen D2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 3 1 67.349 61.639 3;4 3.1527E-191 79090 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 204.41 195.08 439900000 26473000 361770000 51656000 0 0 0 0 0 0 0 0 0 0 0 0 52755 5031 47351 443016;443017;443018;443019;443020 350227;350228;350229;350230;350231 350227 5 TPEASPEPK Unmodified 954.46583 0.46582612 4011 Q99460 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.22 1 1 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 17.62 17.634 2 2.4886E-05 10346 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 143.73 117.8 472390000 30842000 47917000 0 23907000 31570000 42452000 13399000 10929000 11285000 68559000 56022000 79537000 11796000 16262000 27908000 52756 4011 47352 443021;443022;443023;443024;443025;443026;443027;443028;443029;443030;443031;443032;443033;443034;443035 350232;350233;350234;350235;350236;350237;350238;350239;350240;350241;350242;350243;350244;350245;350246 350232 14 TPEAVQK Unmodified 771.41267 0.41266834 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 6.6252 6.7303 2 0.026498 4580 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 78.616 30.442 48045000 0 0 0 2731100 2957100 14807000 5575400 5616300 3193400 3246100 2539500 2989400 2159800 2229700 0 52757 1565 47353 443036;443037;443038;443039;443040;443041;443042;443043;443044;443045;443046 350247;350248;350249;350250 350247 4 TPEDAQAVINAYTEINK Unmodified 1875.9214 0.92142191 2684 Q4G0J3 LARP7 La-related protein 7 yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 84.836 80.59 2;3 3.3755E-182 100091 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 305.69 284.74 157380000 0 157380000 0 0 0 0 0 0 0 0 0 0 0 0 0 52758 2684 47354 443047;443048;443049 350251;350252 350251 2 TPEDAQAVINAYTEINKK Unmodified 2004.0164 0.016384931 2684 Q4G0J3 LARP7 La-related protein 7 yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 81.128 78.214 3 0.00018895 93743 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 83.758 78.118 21605000 0 17441000 4163800 0 0 0 0 0 0 0 0 0 0 0 0 52759 2684 47355 443050;443051 350253;350254 350253 1 TPEDLSR Unmodified 816.39775 0.39774656 5278 Q9Y6D9 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 13.319 13.523 2 0.022638 12085 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 104.45 58.077 103920000 0 0 0 5666600 4492200 0 0 0 0 0 22145000 17435000 16301000 11480000 26404000 52760 5278 47356 443052;443053;443054;443055;443056;443057;443058 350255;350256;350257;350258 350255 4 TPEEAALFK Unmodified 1004.5179 0.51786169 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 53.845 52.089 2 0.0031269 59015 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 91.064 62.642 300810000 5919000 175440000 3484700 0 10854000 18977000 17148000 14463000 15772000 21386000 0 0 17365000 0 0 52761 1601 47357 443059;443060;443061;443062;443063;443064;443065;443066;443067;443068;443069 350259;350260;350261;350262;350263;350264;350265;350266;350267;350268;350269;350270 350269 11 TPEEDEGQSQP Unmodified 1215.4891 0.48914034 502 O75459 PAGE1 P antigen family member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.902 15.073 2 0.00030193 13899 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 103.83 93.922 83296000 0 0 0 4363100 2315700 2292200 3955100 5082500 2627300 4208100 13707000 10514000 8329600 9269800 16632000 52762 502 47358 443070;443071;443072;443073;443074;443075;443076;443077;443078;443079;443080;443081 350271;350272;350273 350271 3 TPEELLR Unmodified 856.46543 0.46543219 348 O43633 CHMP2A Charged multivesicular body protein 2a yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.755 39.934 2 0.022617 43271 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 119.56 39.618 587150000 0 0 0 46335000 1878200 56799000 43697000 38912000 29125000 53020000 63266000 72242000 50423000 39220000 92230000 52763 348 47359 443082;443083;443084;443085;443086;443087;443088;443089;443090;443091;443092;443093 350274;350275;350276;350277 350277 3 TPEELLRQNQR Unmodified 1382.7266 0.72662569 348 O43633 CHMP2A Charged multivesicular body protein 2a yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 35.689 35.663 3 0.0097966 39138 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 45.433 31.198 66868000 0 0 0 0 15842000 0 19881000 14384000 16761000 0 0 0 0 0 0 52764 348 47360 443094;443095;443096;443097 350278 350278 1 TPEERSLPSDLAFNGDLAK Unmodified 2059.0222 0.02219859 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 77.922 74.867 3 4.0531E-06 91286 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 70.114 65.01 31343000 0 9939600 21403000 0 0 0 0 0 0 0 0 0 0 0 0 52765 4285 47361 443098;443099 350279;350280;350281 350281 3 TPEEVIEYSAVFWERCNELQDIEK Unmodified 2983.391 0.39095321 389 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes yes 0 0 1 By MS/MS 2 0 1 1 97.956 89.825 3 1.7756E-56 115940 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 127.05 114.97 20568000 20568000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52766 389 47362 443100 350282 350282 1 TPEEVTR Unmodified 830.4134 0.41339662 794 P05089 ARG1 Arginase-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 9.2757 9.4097 2 0.023353 6722 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 77.058 34.058 199100000 0 0 0 64287000 8786100 10175000 9547500 43363000 4858300 7908500 14810000 16494000 10076000 4731800 4064800 52767 794 47363 443101;443102;443103;443104;443105;443106;443107;443108;443109;443110;443111;443112 350283;350284;350285;350286;350287;350288 350284 6 TPEEYPESAK Unmodified 1149.519 0.51898391 579 O94760 DDAH1 N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 19.892 20.276 2 0.00075579 19712 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 120.33 107.28 29103000 0 0 0 1268100 0 0 0 0 0 0 5526300 5284200 0 3297700 13726000 52768 579 47364 443113;443114;443115;443116;443117 350289;350290;350291;350292 350289 4 TPEIIDLYSNFPIGEK Unmodified 1834.9353 0.93528106 234 O14976 GAK Cyclin-G-associated kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 2 1 2 2 1 1 2 2 91.864 92.006 2;3 2.1451E-10 106713 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 113.65 99.743 36032000 0 0 0 0 0 1402400 813790 2939800 1680800 8083000 4554600 2633500 868330 2236200 10820000 52769 234 47365 443118;443119;443120;443121;443122;443123;443124;443125;443126;443127;443128;443129;443130;443131;443132 350293;350294;350295;350296;350297;350298;350299;350300;350301;350302;350303;350304;350305;350306;350307;350308 350304 16 TPEILTVNSIGQLK Unmodified 1511.8559 0.85590853 3446 Q8NFH3 NUP43 Nucleoporin Nup43 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.62 81.681 2 0.00036261 94563 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 75.474 59.595 126910000 0 0 0 3173500 6619500 9297400 7129400 7387300 3407400 15277000 15721000 14570000 7650400 11122000 25559000 52770 3446 47366 443133;443134;443135;443136;443137;443138;443139;443140;443141;443142;443143;443144 350309;350310;350311;350312;350313;350314;350315;350316;350317;350318;350319;350320;350321 350314 13 TPEIYLAYR Unmodified 1124.5866 0.58660996 3687;3475 Q8TAQ2;Q92922 SMARCC2;SMARCC1 SWI/SNF complex subunit SMARCC2;SWI/SNF complex subunit SMARCC1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 69.308 69.312 2 1.5644E-06 78692 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 157.58 143.91 228320000 0 0 0 8711900 16441000 28874000 20007000 19432000 18486000 28291000 29432000 0 28022000 30625000 0 52771 3475;3687 47367 443145;443146;443147;443148;443149;443150;443151;443152;443153;443154;443155 350322;350323;350324;350325;350326;350327;350328;350329;350330;350331;350332;350333 350329 10 TPELAEEFK Unmodified 1062.5233 0.523341 1601;32 P49792;P0DJD0;P0DJD1;A6NKT7;Q7Z3J3 RANBP2;RGPD1;RGPD2;RGPD3;RGPD4 E3 SUMO-protein ligase RanBP2;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RanBP2-like and GRIP domain-containing protein 3;RanBP2-like and GRIP domain-containing protein 4 no no 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching 7.33 3.77 3 6 1 1 1 1 1 1 1 1 1 56.983 55.035 2 0.0030438 70942 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.37 81.547 130240000 5413600 43423000 4612100 12297000 11141000 15554000 0 0 0 0 0 18865000 14750000 0 4181900 52772 1601;32 47368 443156;443157;443158;443159;443160;443161;443162;443163;443164 350334;350335;350336;350337;350338 350335 4 TPELGIVPPPPIPRPAK Unmodified 1778.0454 0.045440635 3516 Q8TEH3 DENND1A DENN domain-containing protein 1A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.722 79.781 3 1.265E-06 92642 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 80.632 78.158 249290000 0 0 0 11214000 12379000 17397000 15265000 26606000 18058000 21815000 23907000 25428000 16067000 23062000 38090000 52773 3516 47369 443165;443166;443167;443168;443169;443170;443171;443172;443173;443174;443175;443176 350339;350340;350341;350342;350343;350344;350345;350346;350347;350348;350349;350350;350351 350347 13 TPELNLDQFHDK Unmodified 1455.6994 0.69940789 1227 P27824 CANX Calnexin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.46 3.15 5 21 2 2 1 2 2 2 2 2 2 2 1 2 1 1 2 63.908 63.259 2;3 8.2023E-09 71936 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 137.95 123.26 2301000000 22837000 38555000 20119000 133490000 136490000 179710000 152870000 181440000 134170000 207690000 184110000 306760000 177970000 157270000 267520000 52774 1227 47370 443177;443178;443179;443180;443181;443182;443183;443184;443185;443186;443187;443188;443189;443190;443191;443192;443193;443194;443195;443196;443197;443198;443199;443200;443201;443202 350352;350353;350354;350355;350356;350357;350358;350359;350360;350361;350362;350363;350364;350365;350366;350367;350368;350369;350370;350371;350372;350373 350365 18 TPELPEPSVK Unmodified 1095.5812 0.58119023 3279 Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 57.132 51.31 2 4.1121E-05 66075 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 137.14 119.9 17572000 0 17572000 0 0 0 0 0 0 0 0 0 0 0 0 0 52775 3279 47371 443203 350374 350374 0 TPELTWER Unmodified 1030.5084 0.50835964 377;3868 O43865;Q96HN2 AHCYL1;AHCYL2 Putative adenosylhomocysteinase 2;Putative adenosylhomocysteinase 3 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 54.669 54.803 2 0.0053211 61928 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 107.29 78.872 205710000 0 0 0 14528000 8339400 11050000 13930000 16617000 6058400 17424000 25644000 14758000 17212000 16878000 43271000 52776 377;3868 47372 443204;443205;443206;443207;443208;443209;443210;443211;443212;443213;443214;443215 350375;350376;350377;350378;350379;350380;350381;350382;350383 350376 8 TPEMIIQK Unmodified 958.51575 0.5157532 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.258 42.435 2 0.0055452 46620 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 116.9 42.465 466560000 0 0 0 22647000 21397000 37652000 33507000 37489000 29711000 38529000 41937000 54115000 46527000 38318000 64733000 52777 2172 47373 443216;443217;443218;443219;443220;443221;443222;443223;443224;443225;443226;443227 350384;350385;350386;350387;350388;350389;350390;350391;350392;350393;350394;350395 350393 12 TPEMIIQK Oxidation (M) 974.51067 0.51066783 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.6 1.74 1 19 1 1 2 2 2 1 2 1 2 1 1 2 2 29.389 29.335 2 0.004199 32029 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 101.41 61.869 211290000 0 47711000 0 6532700 12663000 14445000 18810000 6263200 20045000 7071500 19838000 10438000 10320000 16120000 21033000 52778 2172 47373 443228;443229;443230;443231;443232;443233;443234;443235;443236;443237;443238;443239;443240;443241;443242;443243;443244;443245;443246;443247 350396;350397;350398;350399;350400;350401;350402;350403;350404;350405;350406;350407;350408;350409;350410;350411;350412 350408 3540 17 TPENHENLFLQPPK Unmodified 1662.8366 0.83657007 3061 Q7LBC6 KDM3B Lysine-specific demethylase 3B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.846 59.953 3 0.001415 67803 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 68.044 68.044 385910000 0 0 0 21709000 23338000 24937000 32823000 32799000 23216000 28697000 32248000 38663000 39418000 35456000 52605000 52779 3061 47374 443248;443249;443250;443251;443252;443253;443254;443255;443256;443257;443258;443259 350413;350414;350415;350416;350417 350416 2 TPENLITEIR Unmodified 1184.6401 0.6401021 3098 Q7Z4H7 HAUS6 HAUS augmin-like complex subunit 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 70.093 70.23 2 0.0011548 80409 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 109.29 58.587 84753000 0 0 0 0 4863600 6136600 8449100 8416000 5942200 6508300 10554000 13241000 8796400 0 11847000 52780 3098 47375 443260;443261;443262;443263;443264;443265;443266;443267;443268;443269;443270 350418;350419;350420;350421;350422;350423;350424;350425;350426;350427;350428;350429;350430 350422 12 TPEPLEEFPK Unmodified 1185.5918 0.59175492 917 P10244 MYBL2 Myb-related protein B yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 65.302 65.23 2 0.016562 74988 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 53.089 40.052 14182000 0 0 0 1842900 1374400 0 3088500 0 0 0 0 0 3463800 0 4412000 52781 917 47376 443271;443272;443273;443274;443275 350431 350431 1 TPEPSSPVK Unmodified 940.48656 0.48656157 3134 Q86TC9 MYPN Myopalladin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 22.057 22.208 2 0.0044876 22738 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 86.67 34.267 272780000 0 0 0 15270000 14926000 26115000 27382000 21228000 22313000 36279000 43647000 31684000 33936000 0 0 52782 3134 47377 443276;443277;443278;443279;443280;443281;443282;443283;443284;443285 350432;350433;350434;350435;350436;350437;350438;350439;350440;350441 350439 7 TPEPVVPTAPEPHPTTSTDQPVTPK Unmodified 2622.3177 0.31771191 2427 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 62.272 61.597 3 4.3555E-78 78629 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.22 116.39 508090000 0 265290000 0 12934000 10884000 15588000 15688000 17740000 13916000 24941000 22848000 29527000 24183000 21840000 32715000 52783 2427 47378 443286;443287;443288;443289;443290;443291;443292;443293;443294;443295;443296;443297;443298;443299 350442;350443;350444;350445;350446;350447;350448;350449;350450;350451;350452;350453;350454;350455;350456;350457;350458;350459;350460 350445 19 TPEQCPSVVSLLSESYNPHVR Unmodified 2398.1587 0.15870885 4011 Q99460 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 83.476 83.608 3 1.1478E-10 96827 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 77.959 66.659 44953000 0 0 0 0 0 2727100 0 0 0 12382000 9038200 11782000 0 0 9023100 52784 4011 47379 443300;443301;443302;443303;443304 350461;350462;350463;350464;350465 350464 5 TPEQIMQEK Unmodified 1102.5329 0.53285983 4385 Q9H3R5 CENPH Centromere protein H yes yes 0 0 0 By MS/MS 2 0 1 1 35.402 30.646 2 0.00089587 39851 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.42 98.118 33706000 0 33706000 0 0 0 0 0 0 0 0 0 0 0 0 0 52785 4385 47380 443305 350466 350466 1 TPEQIMQEK Oxidation (M) 1118.5278 0.52777445 4385 Q9H3R5 CENPH Centromere protein H yes yes 0 1 0 By MS/MS By matching 10 0 2 1 1 14.592 14.945 2 0.028371 14291 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 43.769 28.33 7019800 0 0 0 0 0 0 0 0 0 0 0 4231300 2788500 0 0 52786 4385 47380 443306;443307 350467 350467 1 TPEQLHMLK Unmodified 1095.5747 0.57466507 4979 Q9UKY1 ZHX1 Zinc fingers and homeoboxes protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 49.27 41.445 2 0.026163 57458 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 120.87 81.616 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52787 4979 47381 443308 350468 350468 1 TPEQVAEEEYLLQELRK Unmodified 2074.0582 0.058249746 4550 Q9NPF5 DMAP1 DNA methyltransferase 1-associated protein 1 yes yes 0 0 1 By MS/MS 10 0 1 1 83.327 83.517 3 0.002056 96427 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.85 34.409 6440700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6440700 52788 4550 47382 443309 350469 350469 1 TPERLSLEGERQPK Unmodified 1638.8689 0.86893283 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 2 By MS/MS 2 0 2 2 39.955 33.332 3;4 0.013069 46028 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.292 52.682 147420000 147420000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52789 1364 47383 443310;443311 350470;350471 350470 2 TPESFVLASEHNTPVR Unmodified 1782.8901 0.89006221 2113 Q05209 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 63.034 63.12 3 5.6608E-05 71424 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.376 68.806 44189000 0 0 0 0 4134600 11046000 7154100 4626400 0 0 0 0 4691800 0 12536000 52790 2113 47384 443312;443313;443314;443315;443316;443317 350472;350473;350474;350475;350476 350474 5 TPESIVPIAPELQPSTSR Unmodified 1921.0157 0.015656649 2427 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 82.056 82.117 2;3 1.3267E-08 94782 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.926 85.647 175410000 0 0 0 7040600 9344300 10877000 10717000 11096000 9670200 17249000 17937000 24421000 14124000 15814000 27115000 52791 2427 47385 443318;443319;443320;443321;443322;443323;443324;443325;443326;443327;443328;443329;443330;443331;443332;443333;443334;443335;443336;443337;443338;443339;443340;443341 350477;350478;350479;350480;350481;350482;350483;350484;350485;350486;350487;350488;350489;350490 350481 13 TPESKPTILVK Unmodified 1211.7125 0.71253876 5154 Q9Y3B9 RRP15 RRP15-like protein yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 42.168 36.966 3 0.011255 50962 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 44.612 29.24 27495000 16027000 0 11468000 0 0 0 0 0 0 0 0 0 0 0 0 52792 5154 47386 443342;443343 350491 350491 1 TPETVVPTALELQPSTSTDRPVTSEPTSQATR Unmodified 3395.7056 0.70562206 2427 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 2 1 1 1 1 1 2 77.598 77.679 3;4 2.7865E-128 88917 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 138.02 135.71 234450000 0 0 0 4958900 9307600 11755000 9852100 18217000 21653000 26824000 23694000 30401000 9219500 22805000 45767000 52793 2427 47387 443344;443345;443346;443347;443348;443349;443350;443351;443352;443353;443354;443355;443356;443357 350492;350493;350494;350495;350496;350497;350498;350499;350500;350501;350502;350503;350504;350505;350506;350507;350508;350509;350510 350503 19 TPETVVPTAPELQASASTDQPVTSEPTSR Unmodified 2995.4622 0.46220389 2427 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 75.69 75.73 3 5.3144E-51 87095 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.133 85.937 119020000 0 0 0 6164600 7600400 0 14799000 0 0 10830000 18753000 14971000 8494800 13805000 23607000 52794 2427 47388 443358;443359;443360;443361;443362;443363;443364;443365;443366 350511;350512;350513;350514;350515;350516;350517;350518;350519 350513 9 TPETVVPTAPELQISTSTDQPVTPK Unmodified 2635.3592 0.35924237 2427 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 81.229 81.409 3 4.6479E-13 93812 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 63.376 56.161 4757300 0 0 0 0 0 0 0 0 4757300 0 0 0 0 0 0 52795 2427 47389 443367 350520 350520 1 TPETVVPTAPELQISTSTDQPVTPKPTSR Unmodified 3076.5928 0.59282414 2427 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 78.063 78.16 3 5.4516E-114 90300 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 145.52 139.68 154020000 0 0 0 0 8237900 10742000 11552000 11523000 9694900 20871000 21880000 0 17147000 14733000 27639000 52796 2427 47390 443368;443369;443370;443371;443372;443373;443374;443375;443376;443377 350521;350522;350523;350524;350525;350526;350527;350528;350529;350530;350531 350522 11 TPETVVPTAPELQPSTSTDQPVTPEPTSQATR Unmodified 3361.6525 0.65252386 2427 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.092 77.153 3 1.6011E-34 89253 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 74.516 69.906 179080000 0 0 0 6420000 9411600 9488800 13243000 10682000 11484000 20140000 21380000 21943000 14163000 18031000 22692000 52797 2427 47391 443378;443379;443380;443381;443382;443383;443384;443385;443386;443387;443388;443389 350532;350533;350534;350535 350535 4 TPEVDDEALEK Unmodified 1244.5772 0.57722707 63 CON__P02754 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 30 2 3 3 3 3 3 2 2 3 2 2 2 37.128 37.296 2 1.3566E-15 42974 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 176.38 163 + 1231200000 0 0 0 10388000 85026000 117010000 361480000 62124000 59651000 87054000 133770000 129310000 68682000 50053000 66680000 52798 63 47392 443390;443391;443392;443393;443394;443395;443396;443397;443398;443399;443400;443401;443402;443403;443404;443405;443406;443407;443408;443409;443410;443411;443412;443413;443414;443415;443416;443417;443418;443419 350536;350537;350538;350539;350540;350541;350542;350543;350544;350545;350546;350547;350548;350549;350550;350551;350552;350553;350554;350555;350556;350557;350558;350559;350560;350561;350562;350563;350564;350565;350566;350567;350568 350563 32 TPEVPPAQPK Unmodified 1062.571 0.5709599 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 3 1 1 2 2 2 2 3 1 3 1 28.91 29.087 2 0.0055794 32037 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 68.383 46.251 116240000 0 0 0 3887400 12887000 0 6719100 6915700 3805000 15153000 6927800 23907000 4914900 21532000 9590400 52799 5216 47393 443420;443421;443422;443423;443424;443425;443426;443427;443428;443429;443430;443431;443432;443433;443434;443435;443436;443437;443438;443439;443440;443441;443442 350569;350570;350571;350572;350573;350574;350575;350576;350577;350578;350579;350580;350581;350582;350583;350584;350585;350586;350587;350588 350587 16 TPEVPPAQPKPGVAAPPEVAPAPK Unmodified 2344.2791 0.27908198 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 62.255 62.41 3 0.00054638 71300 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 32.081 28.983 6599600 0 0 0 0 0 0 3511500 3088100 0 0 0 0 0 0 0 52800 5216 47394 443443;443444 350589;350590 350589 2 TPEVSFLPEEATEEAGVR Unmodified 1959.9426 0.94255129 4436 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By matching 10 0 7 1 1 1 1 1 1 1 81.55 81.627 2 0.00045793 94494 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 54.7 41.499 17876000 0 0 0 0 2691800 0 0 3282000 0 0 3286700 3670100 1818700 3126700 0 52801 4436 47395 443445;443446;443447;443448;443449;443450;443451 350591;350592 350592 2 TPEVTCVVVDVSHEDPEVK Unmodified 2138.0201 0.02014968 748 P01857 IGHG1 Ig gamma-1 chain C region yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 75.444 75.465 3 3.7277E-39 87348 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 117.37 108.55 55921000 0 0 0 23107000 2432100 4045900 1896500 0 5688300 5300100 3817900 6875300 1008500 1749400 0 52802 748 47396 443452;443453;443454;443455;443456;443457;443458;443459;443460;443461 350593;350594;350595;350596;350597 350596 5 TPEVVQSTRPIIEGSISQGTPIK Unmodified 2436.3224 0.32240336 488 O75376 NCOR1 Nuclear receptor corepressor 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 75.732 75.584 3 4.5679E-76 86752 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 135.86 125.54 193420000 0 0 6476200 2567500 8206600 13612000 6824700 11016000 12241000 24633000 16290000 22019000 6187900 16793000 46552000 52803 488 47397 443462;443463;443464;443465;443466;443467;443468;443469;443470;443471;443472;443473;443474 350598;350599;350600;350601;350602;350603;350604;350605;350606;350607;350608;350609;350610;350611;350612;350613;350614 350603 17 TPEYLHIDQR Unmodified 1270.6306 0.63060004 124 O00178 GTPBP1 GTP-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 45.568 45.77 3 0.016748 51527 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 45.433 36.479 81989000 0 0 0 0 7264300 10348000 8250100 11996000 0 12100000 0 13839000 0 0 18192000 52804 124 47398 443475;443476;443477;443478;443479;443480;443481 350615;350616;350617 350615 3 TPFGPLSSR Unmodified 960.50288 0.50288033 2019 P85037 FOXK1 Forkhead box protein K1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 50.956 51.107 2 0.00054903 57765 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 145.16 106.35 455760000 0 0 0 31162000 23665000 39359000 27089000 27803000 26929000 43342000 37211000 51140000 53375000 40034000 54648000 52805 2019 47399 443482;443483;443484;443485;443486;443487;443488;443489;443490;443491;443492;443493 350618;350619;350620;350621;350622;350623;350624;350625;350626;350627;350628;350629;350630;350631;350632;350633;350634;350635;350636 350621 19 TPFLLSGTSYK Unmodified 1212.639 0.63903946 1757 P55084 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes yes 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 73.638 73.581 2 0.018457 84857 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 43.512 31.665 10056000 0 0 0 3494700 0 0 2309700 0 0 0 4251400 0 0 0 0 52806 1757 47400 443494;443495;443496 350637 350637 1 TPFLLVGTQIDLRDDPSTIEK Unmodified 2357.2478 0.24784143 1821 P60953 CDC42 Cell division control protein 42 homolog yes yes 0 0 1 By MS/MS By MS/MS 2.67 0.471 1 2 2 1 92.6 87.642 3 5.9933E-25 111236 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.414 83.285 107190000 105130000 2057500 0 0 0 0 0 0 0 0 0 0 0 0 0 52807 1821 47401 443497;443498;443499 350638;350639;350640 350640 3 TPFQQIINQISK Unmodified 1415.7773 0.77726428 1331 P33981 TTK Dual specificity protein kinase TTK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 87.82 87.928 2 0.002789 101800 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 76.332 62.125 39771000 0 0 0 0 1514100 3372100 1872100 2925400 2186300 4408400 4060500 3380500 1450800 2365100 12236000 52808 1331 47402 443500;443501;443502;443503;443504;443505;443506;443507;443508;443509;443510 350641;350642;350643;350644;350645;350646 350646 6 TPGAGESSEDNSDR Unmodified 1420.5702 0.57024421 3517 Q8TEQ0 SNX29 Sorting nexin-29 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 7.0484 7.1585 2 0.0002668 4628 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.693 75.227 11269000 0 0 0 1478500 0 0 2268800 0 2329100 0 0 1763900 0 0 3428800 52809 3517 47403 443511;443512;443513;443514;443515 350647;350648;350649 350648 3 TPGDPSESR Unmodified 944.41994 0.41993856 4026 Q99575 POP1 Ribonucleases P/MRP protein subunit POP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching 10 0 8 1 1 1 1 1 1 1 1 7.028 7.1773 2 0.0095982 4933 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 66.27 42.115 26399000 0 0 0 0 2340600 2961400 0 3516500 2749400 2400000 4461200 0 3531100 0 4439000 52810 4026 47404 443516;443517;443518;443519;443520;443521;443522;443523 350650 350650 1 TPGGVFLNLLK Unmodified 1157.6808 0.6808447 4442 Q9H814 PHAX Phosphorylated adapter RNA export protein yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 89.657 89.826 2 0.0040546 104115 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.985 53.115 4025800 0 0 0 0 0 0 0 0 470200 0 0 0 0 0 3555600 52811 4442 47405 443524;443525 350651 350651 1 TPGHPPPPEIPSELGACDFEKPESPR Unmodified 2840.3439 0.34394343 3615 Q92538 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 0 0 1 By matching By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 73.392 73.563 4 1.1488E-05 84814 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 38.234 31.585 51058000 0 0 0 0 0 0 3932800 0 0 16057000 0 19928000 0 11141000 0 52812 3615 47406 443526;443527;443528;443529 350652;350653 350652 0 TPGNGDGGSTSEAPQPPRKK Unmodified 1979.9661 0.96608069 2472 Q15014 MORF4L2 Mortality factor 4-like protein 2 yes yes 0 0 2 By MS/MS By MS/MS 2 0 6 4 2 17.543 13.842 3;4 9.1846E-07 20192 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.203 58.562 73690000 54043000 0 19647000 0 0 0 0 0 0 0 0 0 0 0 0 52813 2472 47407 443530;443531;443532;443533;443534;443535 350654;350655;350656;350657;350658 350658 3 TPGNNLHEVETAQGQR Unmodified 1749.8394 0.83942362 3379 Q8N9N8 EIF1AD Probable RNA-binding protein EIF1AD yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 28.921 29.12 3 1.6197E-98 30889 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 171.46 167.86 411690000 0 0 0 24511000 27104000 25670000 28742000 30723000 22492000 0 55214000 51428000 48142000 24865000 72803000 52814 3379 47408 443536;443537;443538;443539;443540;443541;443542;443543;443544;443545;443546 350659;350660;350661;350662;350663;350664;350665;350666;350667;350668;350669 350663 11 TPGPGAQSALR Unmodified 1053.5567 0.55670682 1883 P62263 RPS14 40S ribosomal protein S14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26.942 26.391 2 0.00033092 28353 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 100.48 89.767 1026000000 13501000 13259000 0 64563000 60597000 66560000 75033000 72095000 50456000 84163000 99336000 157030000 88036000 70066000 111300000 52815 1883 47409 443547;443548;443549;443550;443551;443552;443553;443554;443555;443556;443557;443558;443559;443560 350670;350671;350672;350673;350674;350675;350676;350677;350678;350679;350680;350681;350682;350683;350684 350675 15 TPGPPGLTTTPAPPDK Unmodified 1545.8039 0.80387296 3106 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching 10 0 4 1 1 1 1 56.583 56.636 2 0.0034142 64695 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 47.288 30.262 13294000 0 0 0 0 2915400 4143100 0 0 0 0 0 0 0 0 6235100 52816 3106 47410 443561;443562;443563;443564 350685;350686 350686 2 TPGPPSAQSSPIDAQPATPLPQK Unmodified 2284.1699 0.16992546 327 O43426 SYNJ1 Synaptojanin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 65.617 65.775 3 0.00011023 74515 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 41.136 32.746 38830000 0 0 0 0 2933900 0 3913400 0 0 8893300 0 8622700 0 5329600 9136700 52817 327 47411 443565;443566;443567;443568;443569;443570 350687;350688;350689;350690;350691;350692;350693 350691 7 TPGQINLAQLR Unmodified 1209.683 0.68296996 5052 Q9UPN9 TRIM33 E3 ubiquitin-protein ligase TRIM33 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.696 67.778 2 0.0014517 77840 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 86.744 49.153 214410000 0 0 0 9462200 10009000 16937000 17137000 15323000 12569000 24581000 22138000 27814000 15189000 15310000 27948000 52818 5052 47412 443571;443572;443573;443574;443575;443576;443577;443578;443579;443580;443581;443582 350694;350695;350696;350697;350698;350699;350700;350701 350697 7 TPGRPTSSQSYEQNIK Unmodified 1791.8751 0.87514042 415 O60573 EIF4E2 Eukaryotic translation initiation factor 4E type 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 27.49 27.78 3 0.00084069 29535 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 52.334 42.546 41555000 0 0 0 0 0 0 5280100 0 0 0 17917000 0 9525200 8832600 0 52819 415 47413 443583;443584;443585;443586 350702;350703;350704;350705 350703 4 TPGSGVNGLEEPSIAK Unmodified 1554.789 0.78895118 3065 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 56.827 56.462 2 0.0013239 64065 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 67.997 57.167 10544000 0 0 0 2978400 3269700 0 4296300 0 0 0 0 0 0 0 0 52820 3065 47414 443587;443588;443589;443590;443591 350706;350707;350708;350709;350710 350707 5 TPGTGSLAAAVETASGR Unmodified 1544.7794 0.77944912 3852 Q96GD0 PDXP Pyridoxal phosphate phosphatase yes yes 0 0 0 By MS/MS 10 0 1 1 69.813 70.279 2 1.0902E-13 80082 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.728 84.84 5620300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5620300 52821 3852 47415 443592 350711 350711 1 TPGVDAPSWLEEQ Unmodified 1427.6569 0.65687437 1712 P53367 ARFIP1 Arfaptin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.31 2.4 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 82.751 83.211 2 0.0021298 90094 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 85.731 64.267 99840000 11561000 0 0 3153400 4535400 7096100 5996200 6169000 5150800 11929000 9391700 7632000 7711200 6726300 12787000 52822 1712 47416 443593;443594;443595;443596;443597;443598;443599;443600;443601;443602;443603;443604;443605 350712;350713 350712 1 TPGVLLPGAGGAAGFGMTSPPPPTSPSR Oxidation (M) 2592.3006 0.30062206 3915;3015 Q96L91;Q6ZTU2 EP400;EP400NL E1A-binding protein p400;EP400 N-terminal-like protein no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 81.215 81.246 3 1.712E-21 94047 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 66.886 59.44 76459000 0 0 0 5624500 5057700 8543800 5904100 6134500 5301200 11060000 0 11523000 9910600 7399600 0 52823 3915;3015 47417 443606;443607;443608;443609;443610;443611;443612;443613;443614;443615 350714;350715;350716;350717;350718;350719;350720;350721;350722;350723;350724;350725 350715 4620 12 TPGVVASAPTK Unmodified 1026.571 0.5709599 3915 Q96L91 EP400 E1A-binding protein p400 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 27.332 27.703 2 0.0041108 28793 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.271 39.49 30703000 0 0 0 0 0 0 0 0 8242900 0 0 0 4806300 9347500 8305900 52824 3915 47418 443616;443617;443618;443619;443620;443621 350726;350727;350728;350729;350730;350731 350727 6 TPGYVVTPHTMNLLK Unmodified 1669.8862 0.8861628 1528 P47897 QARS Glutamine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 75.43 74.08 2;3 1.9195E-30 96098 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 162.49 145.57 424070000 205860000 78010000 0 4612800 3788300 15876000 3510800 12737000 5042600 12636000 11713000 14195000 6074600 9876900 40145000 52825 1528 47419 443622;443623;443624;443625;443626;443627;443628;443629;443630;443631;443632;443633;443634;443635;443636 350732;350733;350734;350735;350736;350737;350738 350737 7 TPGYVVTPHTMNLLK Oxidation (M) 1685.8811 0.88107742 1528 P47897 QARS Glutamine--tRNA ligase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.87 3 5 1 1 1 1 1 1 1 1 65.205 62.884 3 2.0863E-23 78744 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 123.76 101.39 216080000 99094000 26526000 16416000 7784100 13038000 0 15527000 15035000 0 22660000 0 0 0 0 0 52826 1528 47419 443637;443638;443639;443640;443641;443642;443643;443644 350739;350740;350741;350742 350742 2430 3 TPHPVLTPVAANQAK Unmodified 1542.8518 0.85182621 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 4 24 2 1 1 2 2 2 2 2 2 2 2 2 2 2 2 44.637 43.836 2;3 6.5184E-28 48136 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 138.76 124.27 1370300000 341960000 17536000 47518000 46065000 49269000 63498000 62375000 78583000 58556000 75321000 71478000 123640000 98555000 89320000 146610000 52827 1364 47420 443645;443646;443647;443648;443649;443650;443651;443652;443653;443654;443655;443656;443657;443658;443659;443660;443661;443662;443663;443664;443665;443666;443667;443668;443669;443670;443671;443672 350743;350744;350745;350746;350747;350748;350749;350750;350751;350752;350753;350754;350755;350756;350757;350758;350759;350760;350761;350762;350763;350764;350765;350766;350767;350768;350769 350765 27 TPHQKPTEQPQQAK Unmodified 1616.8271 0.82706802 4816 Q9P2E3 ZNFX1 NFX1-type zinc finger-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 6.0428 6.1775 3 0.011975 3359 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 25.718 13.517 15943000 0 0 0 1046100 0 1117400 2197900 928460 1025100 0 2429500 2321500 1847700 1493600 1535700 52828 4816 47421 443673;443674;443675;443676;443677;443678;443679;443680;443681;443682 350770 350770 1 TPHYGSQTPLHDGSR Unmodified 1651.7703 0.77028142 136 O00267 SUPT5H Transcription elongation factor SPT5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 22.082 22.286 3;4 0.00052917 23369 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 50.079 43.781 382570000 0 0 0 19918000 15782000 30531000 18354000 16521000 21105000 35470000 36170000 44164000 41888000 44382000 58290000 52829 136 47422 443683;443684;443685;443686;443687;443688;443689;443690;443691;443692;443693;443694;443695;443696;443697;443698;443699;443700;443701;443702;443703;443704;443705;443706 350771;350772;350773;350774;350775;350776;350777;350778;350779;350780 350776 9 TPIESLFIEATEK Unmodified 1476.7712 0.77117585 2295 Q13459 MYO9B Unconventional myosin-IXb yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 4.83 3.67 3 1 2 1 3 1 1 92.845 89.363 2;3 1.4966E-33 112119 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 208.56 181.96 73007000 8813400 59980000 0 0 0 1023400 0 0 0 0 0 0 0 0 3189700 52830 2295 47423 443707;443708;443709;443710;443711;443712 350781;350782;350783;350784;350785 350781 5 TPIETLIR Unmodified 941.55458 0.55458155 922;1173 P10588;P24468;P10589 NR2F6;NR2F2;NR2F1 Nuclear receptor subfamily 2 group F member 6;COUP transcription factor 2;COUP transcription factor 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.745 63.837 2 0.0074056 71951 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.752 27.038 126150000 0 0 0 7906900 6310800 11887000 8330900 11253000 5440600 12722000 11382000 11604000 9745800 9766100 19797000 52831 922;1173 47424 443713;443714;443715;443716;443717;443718;443719;443720;443721;443722;443723;443724 350786;350787;350788;350789;350790;350791;350792;350793 350788 7 TPIILSKPPAER Unmodified 1320.7765 0.776536 4340 Q9H0W8 SMG9 Protein SMG9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 49.218 49.275 3 0.011746 56271 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 34.685 30.571 79323000 0 0 0 8317400 10909000 9388500 8948200 5348900 7222200 0 12527000 0 0 0 16661000 52832 4340 47425 443725;443726;443727;443728;443729;443730;443731;443732 350794 350794 1 TPIITPNTK Unmodified 983.56515 0.56514624 4577 Q9NQW6 ANLN Actin-binding protein anillin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.245 36.387 2 0.0036937 40068 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 101.72 87.186 123940000 0 0 0 9854800 10471000 0 13893000 8040400 7510900 13799000 14916000 0 15048000 10663000 19747000 52833 4577 47426 443733;443734;443735;443736;443737;443738;443739;443740;443741;443742;443743;443744 350795;350796;350797;350798;350799;350800;350801;350802;350803;350804;350805 350798 11 TPIPLLLR Unmodified 921.60114 0.60113781 3006 Q6ZRS2 SRCAP Helicase SRCAP yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.178 82.24 2 0.026089 95128 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 58.167 55.027 41309000 0 0 0 1893400 1887700 2640200 2804700 2685700 1484900 4355000 3623400 5628200 2880500 4555500 6869900 52834 3006 47427 443745;443746;443747;443748;443749;443750;443751;443752;443753;443754;443755;443756 350806;350807;350808;350809 350806 4 TPIQAGGYGAFPVH Unmodified 1413.7041 0.70409934 1011 P15056 BRAF Serine/threonine-protein kinase B-raf yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 6.57 3.96 3 4 1 1 1 1 1 1 1 72.951 70.704 2 4.7929E-31 88117 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 200.56 174.05 97245000 11764000 72313000 2178300 0 1116800 0 0 0 0 0 0 0 3172300 1993000 4707500 52835 1011 47428 443757;443758;443759;443760;443761;443762;443763 350810;350811;350812 350810 3 TPISEHAVFNVDLMSK Oxidation (M) 1802.8873 0.88728501 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 4 1 1 79.055 73.099 3 1.2515E-05 73486 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 97.767 93.149 344640000 248550000 85769000 10318000 0 0 0 0 0 0 0 0 0 0 0 0 52836 4819 47429 443764;443765;443766;443767;443768;443769 350813;350814;350815;350816;350817;350818 350814 6190 4 TPISEHAVFNVDLMSK Unmodified 1786.8924 0.89237039 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 84.919 79.045 3 1.8876E-11 100520 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 112.57 101.03 387060000 213480000 169060000 4520400 0 0 0 0 0 0 0 0 0 0 0 0 52837 4819 47429 443770;443771;443772;443773 350819;350820;350821;350822 350820 4 TPITQGTGVNFPIGEIPSQPYYHDMNSGVNLQR Oxidation (M) 3645.7522 0.7521951 174 O00712 NFIB Nuclear factor 1 B-type yes yes 0 1 0 By MS/MS 10 0 1 1 85.323 85.492 3 9.3569E-14 98755 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.393 40.526 10949000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10949000 52838 174 47430 443774 350823 350823 248 1 TPIVPVEDLPYTLSMVATIDSQHGIEK Unmodified 2952.5154 0.51542544 166 O00534 VWA5A von Willebrand factor A domain-containing protein 5A yes yes 0 0 0 By MS/MS 2 0 1 1 101.09 96.376 3 0.00022778 119059 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 37.054 28.329 16539000 0 16539000 0 0 0 0 0 0 0 0 0 0 0 0 0 52839 166 47431 443775 350824;350825 350824 2 TPIYDLHCNK Unmodified 1259.5969 0.59685707 4426 Q9H6U6 BCAS3 Breast carcinoma-amplified sequence 3 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 41.964 36.762 3 0.017167 50550 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.194 42.307 25733000 19179000 0 6554000 0 0 0 0 0 0 0 0 0 0 0 0 52840 4426 47432 443776;443777 350826;350827 350826 1 TPLAGPNIDYPVLYGK Unmodified 1716.9087 0.90867238 3316 Q8N2W9 PIAS4 E3 SUMO-protein ligase PIAS4 yes yes 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 83.292 83.355 2 7.7548E-114 96169 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 203.82 190.15 211290000 0 0 0 6397900 12337000 18541000 12674000 16324000 16317000 25346000 20516000 23305000 14191000 14896000 30451000 52841 3316 47433 443778;443779;443780;443781;443782;443783;443784;443785;443786;443787;443788;443789 350828;350829 350828 1 TPLALAGSPTPK Unmodified 1151.655 0.65502388 690 O95785 WIZ Protein Wiz yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.45 3.11 3 1 16 1 2 1 2 2 1 2 2 1 1 1 1 1 1 1 53.042 51.944 2 1.177E-14 57649 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 155.5 143.45 540400000 32621000 121330000 2228500 23972000 28819000 43460000 29997000 27347000 29250000 30895000 39853000 34093000 29234000 27982000 39318000 52842 690 47434 443790;443791;443792;443793;443794;443795;443796;443797;443798;443799;443800;443801;443802;443803;443804;443805;443806;443807;443808;443809 350830;350831;350832;350833;350834;350835;350836;350837;350838;350839;350840;350841;350842;350843;350844;350845;350846;350847 350835 18 TPLAPLAPNLGK Unmodified 1190.7023 0.70230842 3432 Q8NEY1 NAV1 Neuron navigator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.785 72.851 2 0.0013701 83791 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 82.749 73.392 153290000 0 0 0 8211700 9222200 12860000 11270000 12301000 10900000 16329000 15755000 15494000 12184000 10822000 17940000 52843 3432 47435 443810;443811;443812;443813;443814;443815;443816;443817;443818;443819;443820;443821 350848;350849;350850;350851;350852;350853;350854;350855;350856;350857;350858 350849 11 TPLDLAAFK Unmodified 974.54368 0.54368251 251 O15084 ANKRD28 Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 76.535 76.579 2 0.0197 88677 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 53.753 37.706 42086000 0 0 0 2277600 0 5323200 0 0 0 6229000 7242900 0 5880900 5180000 9952200 52844 251 47436 443822;443823;443824;443825;443826;443827;443828 350859;350860;350861;350862 350862 4 TPLFSDGVEMDTPQLDK Oxidation (M) 1907.8823 0.88225921 2573 Q15751 HERC1 Probable E3 ubiquitin-protein ligase HERC1 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 78.585 73.849 2 1.0496E-53 92079 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 148.08 126.52 16785000 0 16785000 0 0 0 0 0 0 0 0 0 0 0 0 0 52845 2573 47437 443829;443830 350863;350864 350863 4224 2 TPLFSDGVEMDTPQLDK Unmodified 1891.8873 0.88734459 2573 Q15751 HERC1 Probable E3 ubiquitin-protein ligase HERC1 yes yes 0 0 0 By MS/MS 2 0 1 1 84.652 79.908 2 1.2902E-203 99351 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 251.91 230.88 70231000 0 70231000 0 0 0 0 0 0 0 0 0 0 0 0 0 52846 2573 47437 443831 350865 350865 1 TPLGGIHISQTK Unmodified 1250.6983 0.69828568 4808 Q9P265 DIP2B Disco-interacting protein 2 homolog B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 1 2 53.497 48.269 2;3 1.9011E-13 66527 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 177.57 133.93 61150000 38983000 5485000 16682000 0 0 0 0 0 0 0 0 0 0 0 0 52847 4808 47438 443832;443833;443834;443835 350866;350867;350868;350869 350867 3 TPLGPLSSR Unmodified 926.51853 0.5185304 2051 Q01167 FOXK2 Forkhead box protein K2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 43.582 43.821 2 0.010473 47894 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 64.268 43.61 192840000 0 0 0 0 9262500 12349000 12573000 15147000 12972000 17122000 24411000 19171000 22087000 16825000 30916000 52848 2051 47439 443836;443837;443838;443839;443840;443841;443842;443843;443844;443845;443846 350870 350870 1 TPLGSISAENQRPREDAVK Unmodified 2067.0709 0.070880117 4288 Q9C0D5 TANC1 Protein TANC1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 42.24 41.797 3;4 0.00013065 45732 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 65.107 55.007 171480000 33132000 0 0 5179400 6812200 11227000 8383700 12162000 8466500 12033000 18278000 13601000 14981000 15369000 11861000 52849 4288 47440 443847;443848;443849;443850;443851;443852;443853;443854;443855;443856;443857;443858;443859 350871;350872;350873;350874;350875;350876;350877;350878;350879 350877 9 TPLHCVMEVDTER Unmodified 1585.7229 0.72286222 4879 Q9UG63 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 51.599 51.747 2;3 3.8136E-09 57432 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 111.31 92.114 705960000 0 0 0 28024000 30899000 58070000 34638000 65533000 40505000 56006000 96360000 79860000 45834000 63621000 106610000 52850 4879 47441 443860;443861;443862;443863;443864;443865;443866;443867;443868;443869;443870;443871;443872;443873;443874;443875;443876;443877;443878;443879;443880;443881;443882;443883 350880;350881;350882;350883;350884;350885;350886;350887;350888;350889;350890;350891;350892;350893;350894;350895;350896;350897;350898;350899;350900;350901;350902;350903 350899 21 TPLHCVMEVDTER Oxidation (M) 1601.7178 0.71777684 4879 Q9UG63 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 39.264 39.393 3 0.00018903 43893 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 73.887 61.009 152150000 0 0 0 20489000 0 0 22236000 25879000 21756000 32274000 0 29517000 0 0 0 52851 4879 47441 443884;443885;443886;443887;443888;443889 350904;350905;350906;350907;350908;350909;350910;350911 350907 6234 6 TPLHCVMEVDTERAMLEK Oxidation (M) 2174.017 0.016995332 4879 Q9UG63 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 0 1 1 By MS/MS 2 0 1 1 72.916 64.72 3 2.449E-09 86008 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 100.02 85.55 64991000 64991000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52852 4879 47442 443890 350912 350912 6234;6235 1 TPLHCVMEVDTERAMLEK Unmodified 2158.0221 0.02208071 4879 Q9UG63 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 0 0 1 By MS/MS 2 0 1 1 79.055 70.924 3 4.6524E-06 93203 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.374 72.622 16147000 16147000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52853 4879 47442 443891 350913 350913 1 TPLHCVMEVDTERAMLEK 2 Oxidation (M) 2190.0119 0.011909954 4879 Q9UG63 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 0 2 1 By MS/MS 2 0 1 1 62.757 54.489 3 0.0039174 73828 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.708 33.868 12280000 12280000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52854 4879 47442 443892 350914 350914 6234;6235 0 TPLHEIALSIK Unmodified 1220.7129 0.71287311 2152 Q08211 DHX9 ATP-dependent RNA helicase A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 68.165 68.247 2;3 0.0018055 78065 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 65.842 43.2 206520000 0 0 0 7906300 7173700 21524000 9348000 10934000 12807000 23007000 16222000 23763000 15800000 19088000 38943000 52855 2152 47443 443893;443894;443895;443896;443897;443898;443899;443900;443901;443902;443903;443904;443905;443906;443907;443908;443909;443910;443911;443912;443913;443914;443915;443916 350915;350916;350917;350918;350919;350920;350921 350916 6 TPLIDLCDGQADQAAK Unmodified 1714.8196 0.81959938 4762 Q9NZB2 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 68.945 68.291 2 1.2886E-40 85657 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145 111.04 134410000 0 68259000 0 3082100 4513100 4443700 3908200 3283300 3115000 6358400 8762200 6968300 6865400 7723300 7128500 52856 4762 47444 443917;443918;443919;443920;443921;443922;443923;443924;443925;443926;443927;443928;443929;443930 350922;350923;350924;350925;350926;350927;350928;350929;350930;350931;350932;350933;350934;350935 350925 14 TPLLGDGPR Unmodified 924.50288 0.50288033 4293 Q9C0J8 WDR33 pre-mRNA 3' end processing protein WDR33 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 42.196 42.368 2 0.02892 47771 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 48.794 32.247 28855000 0 0 0 0 2269300 3041500 2863600 2466100 1837400 2758300 3608200 0 0 3557600 6452700 52857 4293 47445 443931;443932;443933;443934;443935;443936;443937;443938;443939 350936 350936 1 TPLMEAAENNHLEAVK Unmodified 1765.8669 0.86688392 4469 Q9H9B1 EHMT1 Histone-lysine N-methyltransferase EHMT1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.578 60.683 3 0.005661 68501 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 37.645 27.987 59168000 0 0 0 2715600 2923300 4327800 4054900 5683700 2924100 5602400 6387400 5736100 5280000 4215200 9318000 52858 4469 47446 443940;443941;443942;443943;443944;443945;443946;443947;443948;443949;443950;443951 350937 350937 1 TPLQLDPQQEQQLFR Unmodified 1839.9479 0.94791144 4016 Q99501 GAS2L1 GAS2-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 81.17 81.247 2 2.9223E-28 94078 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 142.07 125.54 40354000 0 0 0 0 3370900 7669500 4154200 4092700 3769200 7852700 0 9445200 0 0 0 52859 4016 47447 443952;443953;443954;443955;443956;443957;443958;443959 350938;350939;350940;350941;350942;350943;350944;350945 350939 8 TPLRPLDPTR Unmodified 1164.6615 0.66150624 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.022 39.202 3 0.0044564 43091 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 64.439 43.661 5656800000 0 0 0 300020000 273670000 414020000 370850000 384490000 301620000 518370000 601130000 785150000 585950000 509320000 612210000 52860 2102 47448 443960;443961;443962;443963;443964;443965;443966;443967;443968;443969;443970;443971 350946;350947;350948;350949;350950;350951;350952;350953 350950 6 TPLSDSGVTQR Unmodified 1159.5833 0.5833155 4549 Q9NPF4 OSGEP Probable tRNA N6-adenosine threonylcarbamoyltransferase yes yes 0 0 0 By MS/MS 10 0 1 1 28.531 29.235 2 0.014595 31097 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 67.897 56.534 21010000 0 0 0 0 0 0 0 0 0 0 0 21010000 0 0 0 52861 4549 47449 443972 350954 350954 0 TPLSEAEFEEIMNR Oxidation (M) 1680.7665 0.76650118 2620 Q16630 CPSF6 Cleavage and polyadenylation specificity factor subunit 6 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 1 2 2 2 2 2 2 2 2 74.141 74.198 2;3 1.7547E-101 84965 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 204.17 189.48 782930000 0 0 0 41217000 64260000 68421000 37480000 54168000 60420000 76010000 76423000 94958000 58528000 52143000 98907000 52862 2620 47450 443973;443974;443975;443976;443977;443978;443979;443980;443981;443982;443983;443984;443985;443986;443987;443988;443989;443990;443991;443992;443993;443994;443995 350955;350956;350957;350958;350959;350960;350961;350962;350963;350964;350965;350966;350967;350968;350969;350970;350971;350972;350973;350974;350975 350960 4277 14 TPLSEAEFEEIMNR Unmodified 1664.7716 0.77158655 2620 Q16630 CPSF6 Cleavage and polyadenylation specificity factor subunit 6 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 1 1 2 2 2 2 2 2 2 2 84.104 84.227 2;3 4.4765E-118 97263 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 257.8 181.57 171010000 0 0 0 0 4869800 4992000 4084200 14027000 12430000 19868000 17229000 19206000 6929500 13658000 53718000 52863 2620 47450 443996;443997;443998;443999;444000;444001;444002;444003;444004;444005;444006;444007;444008;444009;444010;444011;444012;444013;444014 350976;350977;350978;350979;350980;350981;350982;350983;350984;350985;350986;350987 350979 12 TPLSTGGTLAFVSPSLAVHK Unmodified 1982.0837 0.083676635 3208 Q86YP4 GATAD2A Transcriptional repressor p66-alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 83.042 82.226 3 2.3722E-08 95079 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.269 65.629 89758000 12074000 0 0 0 2715700 0 4402700 0 8870500 12036000 6231500 0 7176400 9684500 26567000 52864 3208 47451 444015;444016;444017;444018;444019;444020;444021;444022;444023 350988;350989;350990;350991;350992;350993;350994;350995;350996 350990 9 TPLTATLSK Unmodified 930.5386 0.53859714 751 P01876 IGHA1 Ig alpha-1 chain C region yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.581 41.758 2 0.0012208 46406 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 130.56 101.19 703260000 0 0 0 40537000 16509000 23877000 26503000 42376000 12772000 369640000 50973000 28669000 55837000 13795000 21771000 52865 751 47452 444024;444025;444026;444027;444028;444029;444030;444031;444032;444033;444034;444035 350997;350998;350999;351000;351001;351002;351003;351004;351005;351006;351007 351002 9 TPLTHALPGLSEQEGQK Unmodified 1804.9319 0.93192702 1339 P35052 GPC1 Glypican-1;Secreted glypican-1 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 60.572 60.633 3 0.0056597 68836 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 25.44 0.88134 73188000 0 0 0 3157300 5388200 7761800 4691100 3846200 4713300 6925800 9113600 11896000 8742900 6952500 0 52866 1339 47453 444036;444037;444038;444039;444040;444041;444042;444043;444044;444045;444046 351008;351009;351010;351011 351008 3 TPLTSADEHVHSK Unmodified 1420.6947 0.69465686 2759 Q5SW79 CEP170 Centrosomal protein of 170 kDa yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.743 18.935 3 3.019E-09 19618 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 112.08 95.142 178800000 0 0 0 11318000 13233000 17467000 13043000 12015000 13060000 18941000 14851000 17219000 15854000 11845000 19950000 52867 2759 47454 444047;444048;444049;444050;444051;444052;444053;444054;444055;444056;444057;444058 351012;351013;351014;351015;351016;351017;351018;351019;351020;351021 351012 8 TPLVNESLK Unmodified 999.56006 0.56006086 680 O95684 FGFR1OP FGFR1 oncogene partner yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 43.52 43.968 2 0.013257 48154 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.074 31.502 27013000 0 0 0 0 0 0 0 0 0 0 0 0 8197400 6426800 12389000 52868 680 47455 444059;444060;444061 351022;351023 351022 2 TPLYSQLLQAYK Unmodified 1423.7711 0.77111627 2926 Q6P2C8 MED27 Mediator of RNA polymerase II transcription subunit 27 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 83.951 84.097 2 6.2636E-08 97118 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 142.83 126.16 27606000 0 0 0 0 0 0 0 3850000 0 4927900 0 5459300 0 2589600 10780000 52869 2926 47456 444062;444063;444064;444065;444066;444067;444068 351024;351025;351026;351027;351028;351029;351030 351026 7 TPMDMGTIK Oxidation (M) 1008.462 0.46200307 441 O60885 BRD4 Bromodomain-containing protein 4 yes yes 0 1 0 By matching By MS/MS 2 0 2 1 1 28.689 23.726 2 0.03462 31246 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.91 33.385 35215000 1815100 33400000 0 0 0 0 0 0 0 0 0 0 0 0 0 52870 441 47457 444069;444070 351031 351031 1 TPMDMGTIK Unmodified 992.46709 0.46708845 441 O60885 BRD4 Bromodomain-containing protein 4 yes yes 0 0 0 By MS/MS 2 0 1 1 48.463 42.815 2 0.047711 55739 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.433 37.878 92379000 0 92379000 0 0 0 0 0 0 0 0 0 0 0 0 0 52871 441 47457 444071 351032 351032 1 TPMENIGLQDSLLSR Oxidation (M) 1688.8403 0.84033482 1183 P25205 MCM3 DNA replication licensing factor MCM3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 75.585 75.592 2 3.6387E-27 86740 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 132.59 117.91 115550000 0 0 0 7475000 9420200 11619000 11732000 0 10040000 0 21317000 0 12323000 0 31627000 52872 1183 47458 444072;444073;444074;444075;444076;444077;444078;444079 351033;351034;351035;351036;351037;351038;351039;351040;351041;351042 351038 1715 10 TPMENIGLQDSLLSR Unmodified 1672.8454 0.8454202 1183 P25205 MCM3 DNA replication licensing factor MCM3 yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 81.149 81.207 2 4.006E-148 93597 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 213.73 189.39 124150000 0 0 0 1929800 2120700 8291800 2156700 5613100 6640900 6318100 14043000 11178000 0 11262000 54598000 52873 1183 47458 444080;444081;444082;444083;444084;444085;444086;444087;444088;444089;444090 351043;351044;351045;351046;351047;351048 351045 6 TPMIAGGLFVMDK Oxidation (M) 1394.6938 0.69379392 2177 Q10471 GALNT2 Polypeptide N-acetylgalactosaminyltransferase 2;Polypeptide N-acetylgalactosaminyltransferase 2 soluble form yes yes 0 1 0 By MS/MS 2 0 1 1 86.682 78.551 2 0.0021922 102455 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.674 49.662 8874800 8874800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52874 2177 47459 444091 351049;351050 351050 3548 2 TPMIAGGLFVMDK Unmodified 1378.6989 0.6988793 2177 Q10471 GALNT2 Polypeptide N-acetylgalactosaminyltransferase 2;Polypeptide N-acetylgalactosaminyltransferase 2 soluble form yes yes 0 0 0 By MS/MS 2 0 1 1 93.223 85.093 2 0.0036003 110167 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 92.112 75.858 11161000 11161000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52875 2177 47459 444092 351051 351051 1 TPMSVLQQAGGSMMDGPGPR 3 Oxidation (M) 2063.9074 0.90744488 5066 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 0 3 0 By MS/MS By MS/MS 10 0 2 1 1 49.69 49.454 3 2.6594E-06 55772 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 62.739 57.553 32308000 0 0 0 0 10146000 0 22163000 0 0 0 0 0 0 0 0 52876 5066 47460 444093;444094 351052;351053;351054 351052 6429;6430;6431 3 TPMYGSQTPLQDGSR Oxidation (M) 1652.7464 0.74643444 136 O00267 SUPT5H Transcription elongation factor SPT5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 40.265 40.265 2 3.0692E-05 44789 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 76.326 64.112 16552000 0 0 0 3812800 0 0 0 0 0 7646300 0 0 5093000 0 0 52877 136 47461 444095;444096;444097;444098 351055;351056 351056 187 2 TPMYGSQTPLQDGSR Unmodified 1636.7515 0.75151981 136 O00267 SUPT5H Transcription elongation factor SPT5 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.75 47.913 2 8.3064E-27 52944 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 129.34 123.5 96462000 0 0 0 5324400 3761800 8121600 5047800 4760200 3805500 11218000 9500500 9612100 8661800 8499600 18149000 52878 136 47461 444099;444100;444101;444102;444103;444104;444105;444106;444107;444108;444109;444110 351057;351058;351059;351060;351061;351062;351063;351064;351065;351066;351067 351059 11 TPMYGSQTPMYGSGSR Unmodified 1718.7392 0.73924057 136 O00267 SUPT5H Transcription elongation factor SPT5 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 48.757 49.032 2 1.3551E-20 54497 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 113.77 99.56 14905000 0 0 0 0 0 0 0 0 0 0 0 0 6835000 8069600 0 52879 136 47462 444111;444112 351068 351068 1 TPNGPNIDK Unmodified 954.47706 0.47705951 3633 Q92598 HSPH1 Heat shock protein 105 kDa yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 18.023 18.241 2 0.015207 18826 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 57.59 38.112 49370000 0 0 0 0 1037800 2978800 1826600 2064100 1837100 2767200 4572600 5502300 1744900 5839400 19199000 52880 3633 47463 444113;444114;444115;444116;444117;444118;444119;444120;444121;444122;444123 351069 351069 1 TPNGPNIDKKEEDLEDK Unmodified 1940.9327 0.93271488 3633 Q92598 HSPH1 Heat shock protein 105 kDa yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 32.162 32.429 3 1.6191E-12 34306 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.808 74.165 83735000 0 0 0 3054100 0 0 3767900 2956000 1395600 5112400 16022000 16240000 4988100 6567300 23632000 52881 3633 47464 444124;444125;444126;444127;444128;444129;444130;444131;444132;444133 351070;351071;351072;351073;351074;351075 351071 6 TPNGVVLAPVQLGK Unmodified 1391.8136 0.81364979 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.907 75.969 2 5.4196E-14 87535 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 115.57 101.8 281920000 0 0 0 14738000 13980000 26831000 17332000 20947000 12564000 28719000 25755000 31749000 23364000 23703000 42239000 52882 2392 47465 444134;444135;444136;444137;444138;444139;444140;444141;444142;444143;444144;444145 351076;351077;351078;351079;351080;351081;351082;351083;351084;351085;351086 351082 11 TPNLYIYSK Unmodified 1097.5757 0.57571092 3283 Q8IYH5 ZZZ3 ZZ-type zinc finger-containing protein 3 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 57.837 58.052 2 0.011671 66144 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 62.463 37.644 19079000 0 0 0 0 0 6743400 0 0 0 0 12336000 0 0 0 0 52883 3283 47466 444146;444147 351087 351087 1 TPNPANQYQFDK Unmodified 1421.6575 0.65754307 2343 Q13769 THOC5 THO complex subunit 5 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 45.637 44.153 2 0.0055676 49036 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.132 49.82 154010000 0 111260000 0 0 0 0 0 0 0 0 18552000 0 0 0 24199000 52884 2343 47467 444148;444149;444150 351088;351089 351089 1 TPNTFAVCTK Unmodified 1137.5488 0.54884425 396 O60333 KIF1B Kinesin-like protein KIF1B yes yes 0 0 0 By MS/MS 2 0 1 1 42.71 37.562 2 0.020741 48796 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.932 66.104 14504000 0 14504000 0 0 0 0 0 0 0 0 0 0 0 0 0 52885 396 47468 444151 351090 351090 1 TPPAAAALGAPPPLVTAAGPPTPPGPPR Unmodified 2538.3958 0.39584307 4518 Q9HCM7 FBRSL1 Fibrosin-1-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 86.306 86.413 3 3.0916E-21 100064 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 67.778 64.813 62438000 0 0 0 0 4650800 4042800 4726200 4740300 4651100 5471700 5423100 10228000 4109300 5432900 8961300 52886 4518 47469 444152;444153;444154;444155;444156;444157;444158;444159;444160;444161;444162 351091;351092;351093;351094;351095;351096;351097;351098;351099;351100;351101;351102;351103;351104;351105 351099 15 TPPAPSPFDLPELK Unmodified 1507.7922 0.79224564 632 O95239 KIF4A Chromosome-associated kinesin KIF4A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 86.501 85.851 2 1.6947E-14 106894 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.86 99.114 175350000 0 109810000 2255400 1989500 3405100 6751500 2301500 3218900 5195200 6338700 5557800 7932900 5946800 4365500 10276000 52887 632 47470 444163;444164;444165;444166;444167;444168;444169;444170;444171;444172;444173;444174;444175;444176;444177 351106;351107;351108;351109;351110;351111;351112;351113;351114;351115;351116;351117;351118;351119;351120 351109 15 TPPEAIALCSR Unmodified 1213.6125 0.61250714 1605 P49841 GSK3B Glycogen synthase kinase-3 beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 51.983 52.114 2 0.017282 57694 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.092 35.941 84452000 0 0 0 4579100 3435500 11342000 6182900 0 9295900 9024600 11343000 12259000 0 6782700 10207000 52888 1605 47471 444178;444179;444180;444181;444182;444183;444184;444185;444186;444187 351121;351122;351123;351124 351122 4 TPPGLQHEYAAPADYFR Unmodified 1931.9166 0.91661131 4192 Q9BVL2 NUPL1 Nucleoporin p58/p45 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 71.503 71.568 3 0.00014102 81897 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 66.335 64.372 170190000 0 0 0 2889400 5496700 15664000 0 23160000 7427300 18131000 18794000 24410000 12339000 12823000 29054000 52889 4192 47472 444188;444189;444190;444191;444192;444193;444194;444195;444196;444197;444198 351125;351126;351127;351128;351129;351130;351131;351132;351133;351134 351129 8 TPPGVSAPTEPLLCK Unmodified 1565.8123 0.81232916 1252 P29558 RBMS1 RNA-binding motif, single-stranded-interacting protein 1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching 8.86 2.8 1 6 1 1 1 1 1 1 1 69.255 68.414 2 0.00068042 86117 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.266 73.376 61182000 0 44840000 0 1930700 0 2034200 0 0 0 0 0 0 2600200 4157900 5619700 52890 1252 47473 444199;444200;444201;444202;444203;444204;444205 351135;351136;351137;351138 351135 4 TPPPFPGEPWK Unmodified 1251.6288 0.62880913 4948 Q9UJY1 HSPB8 Heat shock protein beta-8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 74.204 74.214 2 0.029005 85304 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.213 22.437 55967000 0 0 0 5878400 5003600 0 4821500 5857700 0 0 8661600 0 8179100 0 17565000 52891 4948 47474 444206;444207;444208;444209;444210;444211;444212 351139 351139 1 TPPPGQDTQQFHEK Unmodified 1608.7532 0.75323437 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 21.854 21.979 3 0.011134 23094 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 44.436 30.004 39749000 0 0 0 0 0 6548500 5556600 0 8317800 7715500 0 0 11610000 0 0 52892 2193 47475 444213;444214;444215;444216;444217 351140;351141 351140 0 TPPPQPPLISSMDSISQK Unmodified 1921.9819 0.98191368 3645 Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 84.239 79.993 2;3 0.00022763 99458 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.622 47.594 94937000 0 94937000 0 0 0 0 0 0 0 0 0 0 0 0 0 52893 3645 47476 444218;444219;444220 351142;351143 351142 2 TPPPVLIFAEK Unmodified 1210.6962 0.69616041 4941 Q9UJV9 DDX41 Probable ATP-dependent RNA helicase DDX41 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.43 2.06 1 13 1 1 2 1 1 1 1 1 1 1 1 1 1 83.686 83.141 2 0.00039146 96409 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 86.898 68.359 211420000 35227000 0 0 7357500 9293300 11981000 11140000 9734800 10036000 14948000 18027000 21552000 18838000 16073000 27208000 52894 4941 47477 444221;444222;444223;444224;444225;444226;444227;444228;444229;444230;444231;444232;444233;444234 351144;351145;351146;351147;351148;351149;351150;351151;351152;351153;351154;351155;351156;351157 351144 14 TPPQLQECLAVYK Unmodified 1545.7861 0.78611441 572 O76027 ANXA9 Annexin A9 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 71.614 71.697 2 0.0041523 82945 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 51.092 27.716 22009000 0 0 0 0 2642700 0 2639300 0 3591400 2855200 0 0 3368700 0 6911700 52895 572 47478 444235;444236;444237;444238;444239;444240 351158;351159;351160;351161;351162 351161 5 TPPRDLPTIPGVTSPSSDEPPMEASQSHLRNSPEDK Unmodified 3868.8538 0.85375964 2311 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 yes yes 0 0 2 By MS/MS 2 0 1 1 80.545 72.414 5 2.613E-05 95038 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 35.973 32.721 17628000 17628000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52896 2311 47479 444241 351163 351163 1 TPPRPQGQRPAPESR Unmodified 1672.8757 0.87574954 4071 Q99942 RNF5 E3 ubiquitin-protein ligase RNF5 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 12.484 12.653 4 0.0083322 12265 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 28.089 17.622 49932000 0 0 0 4203400 5210400 0 5265100 6952100 0 0 435250 8455800 7975800 5438400 5995900 52897 4071 47480 444242;444243;444244;444245;444246;444247;444248;444249;444250 351164 351164 1 TPPSEEDSAEAER Unmodified 1416.6005 0.6004817 364 O43765 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 15.388 15.522 2 0.0011087 15102 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.82 62.422 30659000 0 0 0 1542200 732250 1801900 1857000 0 1244600 0 0 7000700 3056400 5768900 7655000 52898 364 47481 444251;444252;444253;444254;444255;444256;444257;444258;444259 351165;351166;351167;351168 351167 4 TPPSEEDSAEAERLK Unmodified 1657.7795 0.7795087 364 O43765 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 29.975 30.125 3 8.1399E-06 32601 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 79.81 71.945 212890000 0 0 0 17674000 10177000 11950000 15579000 9070200 10387000 21955000 0 30708000 0 25584000 59801000 52899 364 47482 444260;444261;444262;444263;444264;444265;444266;444267;444268;444269 351169;351170;351171;351172;351173;351174;351175;351176;351177 351174 9 TPPSVGPPSVTVVTLESAPSALEK Unmodified 2362.2632 0.26315714 3999 Q96T58 SPEN Msx2-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 88.458 87.733 3 2.0763E-09 101870 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 59.356 51.267 41593000 0 24632000 0 0 1140000 0 0 1683900 1470600 3150800 1472900 2986800 0 1677300 3378800 52900 3999 47483 444270;444271;444272;444273;444274;444275;444276;444277;444278;444279 351178;351179;351180;351181 351178 4 TPPTADQPPPRPAAPVLPTNTVSSAK Unmodified 2609.3813 0.38131522 4995 Q9ULH7 MKL2 MKL/myocardin-like protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 64.829 64.846 3 3.3842E-13 73484 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 61.801 49.605 99695000 0 0 0 6394700 7659200 8159100 10378000 9139200 8165000 12722000 0 13870000 11221000 11987000 0 52901 4995 47484 444280;444281;444282;444283;444284;444285;444286;444287;444288;444289 351182;351183;351184;351185;351186;351187;351188;351189;351190;351191;351192;351193;351194 351189 13 TPPTAVTEHDVNVAFQQSAHK Unmodified 2276.1186 0.11855859 4881 Q9UGJ1 TUBGCP4 Gamma-tubulin complex component 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.24 3.75 5 1 11 2 2 2 1 1 1 1 1 1 1 1 1 1 1 61.099 59.099 3;4 4.5951E-18 77393 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.609 67.355 238060000 55646000 51571000 53977000 2780000 5910300 9060700 6252800 6723100 4491000 12284000 7565200 7339800 6972500 7490400 0 52902 4881 47485 444290;444291;444292;444293;444294;444295;444296;444297;444298;444299;444300;444301;444302;444303;444304;444305;444306 351195;351196;351197;351198;351199;351200;351201;351202;351203;351204;351205 351198 11 TPPVALNSSR Unmodified 1040.5615 0.56145784 5066 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 31.334 31.855 2 0.012975 34188 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 51.528 23.646 20938000 0 0 0 0 0 0 0 0 3739700 0 0 11209000 0 0 5989500 52903 5066 47486 444307;444308;444309 351206 351206 1 TPPVAVTSPITHTAQSALK Unmodified 1918.0524 0.052376507 3432 Q8NEY1 NAV1 Neuron navigator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69.157 68.742 3 6.0362E-06 85779 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 77.08 72.262 238790000 0 3605100 8318100 12890000 14413000 18136000 14891000 17427000 16666000 26596000 24389000 27521000 9239900 16502000 28199000 52904 3432 47487 444310;444311;444312;444313;444314;444315;444316;444317;444318;444319;444320;444321;444322;444323 351207;351208;351209;351210;351211;351212;351213;351214;351215;351216;351217;351218;351219;351220;351221;351222 351217 16 TPPVFASEGK Unmodified 1031.5288 0.52876073 3950 Q96PZ0 PUS7 Pseudouridylate synthase 7 homolog yes yes 0 0 0 By MS/MS By MS/MS By matching 2.25 0.433 3 1 1 2 1 42.182 37.123 2 0.00090464 48330 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.71 103.29 770820000 13695000 749010000 8118200 0 0 0 0 0 0 0 0 0 0 0 0 52905 3950 47488 444324;444325;444326;444327 351223;351224 351223 2 TPPVPDSGSANGSFFAPSR Unmodified 1889.8908 0.89079049 4543 Q9NPA3 MID1IP1 Mid1-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 71.34 71.404 2 4.1169E-06 82381 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 72.681 50.923 58190000 0 0 0 1887500 2698600 4981200 4403200 4875700 0 6234900 6715200 6156600 5682200 5289900 9264600 52906 4543 47489 444328;444329;444330;444331;444332;444333;444334;444335;444336;444337;444338 351225;351226;351227;351228;351229;351230;351231;351232;351233;351234;351235;351236;351237;351238;351239 351227 15 TPPYADPSLQAPVR Unmodified 1510.778 0.77799256 2099 Q04206 RELA Transcription factor p65 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 63.142 63.309 2 1.0351E-13 71714 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 141.08 120.78 131990000 0 0 0 0 5198600 11222000 10041000 8193100 4271100 15556000 13259000 14557000 8068800 12903000 28720000 52907 2099 47490 444339;444340;444341;444342;444343;444344;444345;444346;444347;444348;444349 351240;351241;351242;351243;351244;351245;351246;351247;351248;351249;351250;351251 351244 12 TPQAAQQTEALASTGSQAQSAPTPAWDEDTAQIGPK Unmodified 3651.7289 0.7288767 4156 Q9BU19 ZNF692 Zinc finger protein 692 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.932 76.983 3 3.4405E-87 89038 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 98.636 96.85 64000000 0 0 0 1590700 5691000 4388000 0 4841200 3721800 8124000 6260400 9515000 4819600 4353500 10695000 52908 4156 47491 444350;444351;444352;444353;444354;444355;444356;444357;444358;444359;444360 351252;351253;351254;351255;351256;351257;351258;351259;351260 351259 9 TPQAPASANLVGPR Unmodified 1377.7365 0.7364621 5066 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 48.233 48.464 2 2.6141E-17 53916 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 139.86 128.26 659400000 0 0 0 0 40468000 51388000 50019000 53398000 42052000 53608000 70430000 82096000 60572000 68548000 86821000 52909 5066 47492 444361;444362;444363;444364;444365;444366;444367;444368;444369;444370;444371 351261;351262;351263;351264 351263 4 TPQDPSSVLK Unmodified 1070.5608 0.56078914 1382 P36915 GNL1 Guanine nucleotide-binding protein-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 38.44 38.249 2 0.0040476 42197 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 74.267 49.491 42308000 0 0 0 11960000 9252100 0 12006000 0 9088700 0 0 0 0 0 0 52910 1382 47493 444372;444373;444374;444375;444376 351265;351266;351267;351268;351269 351266 5 TPQEAIMDGTEIAVSPR Unmodified 1813.888 0.88801329 2130 Q06587 RING1 E3 ubiquitin-protein ligase RING1 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 75.814 75.961 2 3.1276E-18 88016 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 98.942 84.707 17524000 0 0 0 0 0 0 2108700 0 0 0 5123400 0 5823000 4468600 0 52911 2130 47494 444377;444378;444379;444380;444381;444382 351270;351271;351272;351273;351274 351274 5 TPQEDYVEAAVK Unmodified 1348.6511 0.65106071 3642 Q92620 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 54.968 49.621 2 3.5899E-24 63950 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 172.13 143.92 257770000 0 257770000 0 0 0 0 0 0 0 0 0 0 0 0 0 52912 3642 47495 444383;444384 351275;351276 351275 2 TPQGLSNLAK Unmodified 1027.5662 0.56620887 3982 Q96S44 TP53RK TP53-regulating kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.71 3.81 2 1 4 1 2 1 1 1 1 41.294 39.127 2 6.7184E-06 52512 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 128.81 91.083 182810000 50150000 103440000 0 0 0 0 0 0 0 0 9346100 7828000 6719500 5328900 0 52913 3982 47496 444385;444386;444387;444388;444389;444390;444391 351277;351278;351279;351280;351281;351282 351280 6 TPQGPPEIYSDTQFPSLQSTAK Unmodified 2391.1594 0.15942035 4980 Q9UKY7 CDV3 Protein CDV3 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.14 3.33 4 1 16 1 3 1 1 2 1 1 1 1 2 2 1 2 2 81.245 80.18 2;3 0 92919 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 284.07 276.53 5373900000 36096000 4970800000 9139600 1746100 4863600 4329300 0 5819800 4971200 9202400 57641000 76813000 4080700 45822000 142520000 52914 4980 47497 444392;444393;444394;444395;444396;444397;444398;444399;444400;444401;444402;444403;444404;444405;444406;444407;444408;444409;444410;444411;444412 351283;351284;351285;351286;351287;351288;351289;351290;351291;351292;351293;351294;351295;351296;351297;351298 351285 14 TPQGREYGMIYLGK Unmodified 1611.8079 0.80791248 3039 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 72.586 64.348 3 0.0053996 85280 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.941 24.412 26316000 26316000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52915 3039 47498 444413 351299 351299 1 TPQMGDPASLEPQIAETLSNIER Oxidation (M) 2512.2115 0.21153228 2555 Q15642 TRIP10 Cdc42-interacting protein 4 yes yes 0 1 0 By MS/MS 10 0 1 1 91.766 91.883 3 1.4604E-07 106690 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 54.728 40.713 1730100 0 0 0 0 0 0 0 0 0 1730100 0 0 0 0 0 52916 2555 47499 444414 351300 351300 4189 1 TPQMPPTTPSSSFFTK Oxidation (M) 1768.8342 0.83418681 2627 Q16666 IFI16 Gamma-interferon-inducible protein 16 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 65.707 65.863 2 5.5142E-08 75321 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 89.189 75.988 96865000 0 0 0 0 5861100 7011600 8847000 5561000 6607300 10649000 9348500 13469000 8510100 8753200 12248000 52917 2627 47500 444415;444416;444417;444418;444419;444420;444421;444422;444423;444424;444425 351301;351302;351303;351304;351305;351306;351307;351308;351309;351310;351311;351312;351313 351312 4283 13 TPQNFSVPSPGPLNTPVNPSSVMSPAGSSQAEEQQYLDK Oxidation (M) 4100.9273 0.92731851 3971 Q96RN5 MED15 Mediator of RNA polymerase II transcription subunit 15 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 83.811 83.888 4 6.4281E-113 97138 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 109.85 101.92 95687000 0 0 0 0 5599400 0 0 0 0 31451000 19097000 20327000 0 0 19212000 52918 3971 47501 444426;444427;444428;444429;444430 351314;351315;351316;351317 351314 5456 4 TPQNVPASPGGDR Unmodified 1294.6266 0.6265773 2648 Q2KHR2 RFX7 DNA-binding protein RFX7 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching 10 0 7 1 1 1 1 1 1 1 22.572 22.615 2 0.033255 23757 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 33.961 22.471 11042000 0 0 0 1079500 1126300 1321000 1165000 1332000 1471100 0 3547300 0 0 0 0 52919 2648 47502 444431;444432;444433;444434;444435;444436;444437 351318 351318 1 TPQPPAEEPPHPLTYSQLPR Unmodified 2254.1382 0.1382314 3588 Q8WXE0 CASKIN2 Caskin-2 yes yes 0 0 0 By MS/MS 10 0 1 1 68.098 68.242 3 5.7E-09 78256 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 72.568 69.18 13853000 0 0 0 0 0 0 13853000 0 0 0 0 0 0 0 0 52920 3588 47503 444438 351319 351319 1 TPQPSSPMDQMGK Unmodified 1402.6221 0.62208554 183 O14497 ARID1A AT-rich interactive domain-containing protein 1A yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 39.574 39.904 2 0.0010852 43326 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.344 50.82 34624000 0 0 0 0 0 2518700 2516400 0 2500900 3972100 4456200 4384700 3715100 4023200 6536800 52921 183 47504 444439;444440;444441;444442;444443;444444;444445;444446;444447 351320;351321;351322 351320 3 TPQQLWYTHEK Unmodified 1429.699 0.69901396 1053 P17480 UBTF Nucleolar transcription factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 2 14 1 1 1 1 2 1 1 1 1 1 2 1 1 1 46.077 45.503 2;3 0.00032557 49984 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 82.85 76.152 953860000 187150000 0 37823000 38546000 41361000 72042000 37542000 37496000 34138000 46917000 76711000 153170000 67786000 51170000 72006000 52922 1053 47505 444448;444449;444450;444451;444452;444453;444454;444455;444456;444457;444458;444459;444460;444461;444462;444463 351323;351324;351325;351326;351327;351328;351329;351330;351331;351332;351333;351334;351335;351336;351337 351334 9 TPQQTSASQQMLNFPDK Unmodified 1919.9047 0.90472599 3475 Q8TAQ2 SMARCC2 SWI/SNF complex subunit SMARCC2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 2 24 2 2 2 2 2 2 2 2 2 2 2 2 2 64.669 64.52 2;3 0 81631 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 377.09 354.37 277450000 0 50238000 0 12984000 10274000 16935000 15208000 13059000 11968000 22832000 23113000 28192000 14539000 17825000 40277000 52923 3475 47506 444464;444465;444466;444467;444468;444469;444470;444471;444472;444473;444474;444475;444476;444477;444478;444479;444480;444481;444482;444483;444484;444485;444486;444487;444488;444489 351338;351339;351340;351341;351342;351343;351344;351345;351346;351347;351348;351349;351350;351351;351352;351353;351354;351355;351356;351357 351344 15 TPQQTSASQQMLNFPDK Oxidation (M) 1935.8996 0.89964061 3475 Q8TAQ2 SMARCC2 SWI/SNF complex subunit SMARCC2 yes yes 0 1 0 By MS/MS By MS/MS 4 3.03 2 2 1 4 1 54.234 48.887 2;3 1.8106E-87 63072 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 199.38 190.65 58002000 0 58002000 0 0 0 0 0 0 0 0 0 0 0 0 0 52924 3475 47506 444490;444491;444492;444493;444494 351358;351359;351360;351361 351360 5004 4 TPQSPAPCVLLR Unmodified 1337.7126 0.71255553 5260 Q9Y613 FHOD1 FH1/FH2 domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 65.839 65.911 2 0.00046098 75824 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 79.489 67.442 93942000 0 0 0 4102900 4514800 7999600 6774600 0 6756800 0 10828000 13848000 8626000 11695000 18796000 52925 5260 47507 444495;444496;444497;444498;444499;444500;444501;444502;444503;444504 351362;351363;351364;351365;351366;351367;351368;351369 351366 8 TPQSSTSSVQR Unmodified 1176.5735 0.57347909 5073 Q9UQR0 SCML2 Sex comb on midleg-like protein 2 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 7.6011 7.9287 2 0.010893 5623 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.56 39.068 8077500 0 0 0 0 0 0 0 0 0 0 5925900 0 0 0 2151500 52926 5073 47508 444505;444506 351370 351370 1 TPQVGDR Unmodified 771.38752 0.38751622 3255 Q8IX12 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 8.3584 8.4498 2 0.035807 6970 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 70.67 14.768 81260000 0 0 0 0 8293900 9512200 13728000 17044000 15869000 0 16812000 0 0 0 0 52927 3255 47509 444507;444508;444509;444510;444511;444512 351371;351372 351371 2 TPQVGDRVLVEATYNPNMPFK Oxidation (M) 2391.1893 0.18928069 3255 Q8IX12 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes yes 0 1 1 By MS/MS 2 0 1 1 81.595 73.464 3 0.00015032 96270 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.222 53.776 19910000 19910000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52928 3255 47510 444513 351373;351374 351373 4868 2 TPSAAYLWVGTGASEAEK Unmodified 1836.8894 0.8893935 819 P06396 GSN Gelsolin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 77.828 77.806 2 1.6308E-29 90277 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 143.98 111.65 + 57636000 0 0 0 7916400 7064300 8996600 6733800 0 0 0 10215000 7504200 9205100 0 0 52929 819 47511 444514;444515;444516;444517;444518;444519;444520;444521;444522 351375;351376;351377;351378;351379;351380;351381;351382;351383;351384 351382 10 TPSAETPSEPVDWTFAQR Unmodified 2017.9381 0.93813461 396 O60333 KIF1B Kinesin-like protein KIF1B yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 77.89 78.034 2 1.6246E-33 89832 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 124.12 101.89 45240000 0 0 0 0 0 4006500 3023200 3564400 0 5208400 6599400 5615900 3990900 4633700 8597800 52930 396 47512 444523;444524;444525;444526;444527;444528;444529;444530;444531;444532 351385;351386;351387;351388;351389 351386 5 TPSALAILENANVLAR Unmodified 1651.9257 0.92571943 897 P09972 ALDOC Fructose-bisphosphate aldolase C yes yes 0 0 0 By MS/MS 10 0 1 1 93.993 94.134 2 0.020023 109166 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.915 34.05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52931 897 47513 444533 351390 351390 1 TPSALILTPTR Unmodified 1168.6816 0.68157298 2769 Q5T1V6 DDX59 Probable ATP-dependent RNA helicase DDX59 yes yes 0 0 0 By MS/MS 10 0 1 1 66.451 66.592 2 0.052577 76306 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 57.532 34.103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52932 2769 47514 444534 351391 351391 1 TPSASGLLVLASAMR Oxidation (M) 1488.797 0.79701344 3204 Q86Y56 DNAAF5 Dynein assembly factor 5, axonemal yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 82.396 82.471 2 6.4046E-10 95404 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 93.623 69.28 40253000 0 0 0 0 3818700 0 0 0 4950900 9116800 6848500 9456100 6061900 0 0 52933 3204 47515 444535;444536;444537;444538;444539;444540 351392;351393;351394;351395;351396;351397 351392 4823 6 TPSASGLLVLASAMR Unmodified 1472.8021 0.80209882 3204 Q86Y56 DNAAF5 Dynein assembly factor 5, axonemal yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 91.66 91.828 2 0.0080591 106432 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.013 44.16 1632400 0 0 0 0 0 0 0 415180 0 0 0 0 0 0 1217200 52934 3204 47515 444541;444542 351398 351398 1 TPSEALWKPTHEDSK Unmodified 1724.837 0.836964 4973 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 38.291 37.701 3 6.8317E-23 52668 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 121.95 103.94 163820000 48511000 0 0 0 5643800 14926000 7718100 12358000 11927000 0 0 18862000 0 16562000 27309000 52935 4973 47516 444543;444544;444545;444546;444547;444548;444549;444550;444551;444552 351399;351400;351401;351402;351403;351404;351405;351406 351403 8 TPSESIVAISECHTLLSCK Unmodified 2131.0289 0.028940227 2761 Q5SWA1 PPP1R15B Protein phosphatase 1 regulatory subunit 15B yes yes 0 0 0 By MS/MS 2 0 1 1 83.219 75.088 3 0.0005323 98226 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.944 45.405 10029000 10029000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52936 2761 47517 444553 351407 351407 1 TPSGDLAITEK Unmodified 1130.5819 0.58191851 1462 P42684 ABL2 Abelson tyrosine-protein kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 39.117 39.298 2 4.7388E-05 42489 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 115.78 81.529 87352000 0 0 0 6447000 5968300 8652400 5886900 0 4963300 8935400 10201000 9623100 8496700 7946800 10231000 52937 1462 47518 444554;444555;444556;444557;444558;444559;444560;444561;444562;444563;444564 351408;351409;351410;351411;351412;351413;351414;351415;351416;351417;351418 351413 9 TPSIQPSLLPHAAPFAK Unmodified 1773.9778 0.977755 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 2 2 1 1 2 1 2 1 1 2 2 79.208 79.272 2;3 2.5828E-41 91585 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 123.02 105.01 1052700000 0 0 0 30747000 37159000 77132000 56010000 100800000 73758000 103350000 76575000 145320000 68001000 95479000 188420000 52938 1364 47519 444565;444566;444567;444568;444569;444570;444571;444572;444573;444574;444575;444576;444577;444578;444579;444580;444581;444582 351419;351420;351421;351422;351423;351424;351425;351426;351427;351428;351429;351430;351431;351432;351433;351434;351435;351436;351437;351438;351439;351440 351439 17 TPSLDPHQTK Unmodified 1122.5669 0.56693715 1693 P52630 STAT2 Signal transducer and activator of transcription 2 yes yes 0 0 0 By MS/MS 2 0 1 1 23.302 19.276 2 5.5976E-05 25454 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.86 100.84 13554000 0 13554000 0 0 0 0 0 0 0 0 0 0 0 0 0 52939 1693 47520 444583 351441 351441 1 TPSNELYK Unmodified 950.47091 0.4709115 3549 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 22.139 22.257 2 0.041222 23170 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 50.04 19.855 150730000 0 0 0 10937000 5527500 22040000 13284000 8040700 9546700 25456000 22040000 0 14702000 19154000 0 52940 3549 47521 444584;444585;444586;444587;444588;444589;444590;444591;444592;444593 351442 351442 1 TPSNEMTPVTIDLVK Oxidation (M) 1659.8389 0.83893784 5229 Q9Y5B6 PAXBP1 PAX3- and PAX7-binding protein 1 yes yes 0 1 0 By MS/MS 2 0 1 1 77.947 73.172 2 0.00074013 91324 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.536 51.65 16801000 0 16801000 0 0 0 0 0 0 0 0 0 0 0 0 0 52941 5229 47522 444594 351443 351443 6631 1 TPSNEMTPVTIDLVK Unmodified 1643.844 0.84402322 5229 Q9Y5B6 PAXBP1 PAX3- and PAX7-binding protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 84.302 79.558 2 0.0027821 98901 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.428 73.741 43839000 0 43839000 0 0 0 0 0 0 0 0 0 0 0 0 0 52942 5229 47522 444595 351444 351444 1 TPSNGAEGLTPR Unmodified 1198.5942 0.59421454 4010 Q99459 CDC5L Cell division cycle 5-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.291 27.489 2 1.7947E-05 28509 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 105.52 63.414 72566000 0 0 0 3292100 3010000 8342200 4935600 3998900 4644200 7891800 7682300 7459600 7123000 4892800 9293000 52943 4010 47523 444596;444597;444598;444599;444600;444601;444602;444603;444604;444605;444606;444607 351445;351446;351447;351448;351449;351450;351451 351448 5 TPSNLAAAR Unmodified 899.48248 0.48247924 3143 Q86U86 PBRM1 Protein polybromo-1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.312 18.503 2 0.006387 18226 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 75.213 42.858 43116000 0 0 0 2325100 3678100 5121000 2808500 2324200 2163500 3468900 4178200 4813400 4489700 2764800 4980700 52944 3143 47524 444608;444609;444610;444611;444612;444613;444614;444615;444616;444617;444618;444619 351452;351453;351454;351455;351456;351457;351458;351459 351459 8 TPSPAAEDAREPEAK Unmodified 1567.7478 0.74781464 3663 Q92797 SYMPK Symplekin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 21.652 20.994 3 0.00019901 21354 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 44.836 39.683 418560000 0 134750000 2828800 18178000 18835000 22549000 25948000 25378000 21639000 28325000 28159000 38413000 23578000 29979000 0 52945 3663 47525 444620;444621;444622;444623;444624;444625;444626;444627;444628;444629;444630;444631;444632;444633 351460;351461;351462;351463;351464;351465;351466;351467;351468;351469;351470;351471;351472 351470 11 TPSPKEEDEEPESPPEK Unmodified 1923.8585 0.85854688 4349 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.59 2 1 20 1 2 1 2 1 1 2 1 2 2 1 2 3 2 25.071 24.656 2;3 2.7669E-63 30660 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 153.22 145.22 725850000 111660000 276510000 0 25974000 24017000 13863000 26413000 29690000 12222000 18778000 32711000 22938000 34269000 24580000 72224000 52946 4349 47526 444634;444635;444636;444637;444638;444639;444640;444641;444642;444643;444644;444645;444646;444647;444648;444649;444650;444651;444652;444653;444654;444655;444656 351473;351474;351475;351476;351477;351478;351479;351480;351481;351482;351483;351484;351485;351486;351487;351488;351489;351490;351491;351492;351493;351494;351495 351477 23 TPSPSPSTALQQFR Unmodified 1515.7682 0.76815616 5068 Q9UQ84 EXO1 Exonuclease 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 67.781 67.888 2 2.5113E-22 78407 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 147.37 120.04 125500000 0 0 0 0 10253000 6655000 13355000 13792000 0 15397000 13964000 24987000 12665000 14434000 0 52947 5068 47527 444657;444658;444659;444660;444661;444662;444663;444664;444665 351496;351497;351498;351499;351500 351499 4 TPSQDSDYINANFIK Unmodified 1711.8053 0.80532952 2113 Q05209 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 73.455 72.914 2 1.2437E-240 83520 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 256.52 231.67 291810000 0 153880000 0 6548800 9649800 12748000 6829100 9092200 8686400 14626000 15979000 11265000 12323000 13288000 16887000 52948 2113 47528 444666;444667;444668;444669;444670;444671;444672;444673;444674;444675;444676;444677;444678;444679 351501;351502;351503;351504;351505;351506;351507;351508;351509;351510;351511;351512;351513 351505 13 TPSQEGLPLEHVAGDR Unmodified 1704.8431 0.84311201 3291 Q8IZ69 TRMT2A tRNA (uracil-5-)-methyltransferase homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.481 55.61 3 0.00044472 63271 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 59.513 52.283 77970000 0 0 0 4333700 4941100 6798200 4512600 5154400 4332500 6711800 7249100 10507000 7450600 6061800 9916500 52949 3291 47529 444680;444681;444682;444683;444684;444685;444686;444687;444688;444689;444690;444691 351514;351515;351516;351517;351518;351519;351520;351521;351522;351523;351524;351525 351522 10 TPSQLSDNNCRQ Unmodified 1418.6208 0.62083999 2683 Q4G0F5 VPS26B Vacuolar protein sorting-associated protein 26B yes yes 0 0 1 By matching By matching By matching By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 15.239 15.457 2 0.0070415 14218 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.298 79.918 14987000 0 0 0 0 0 1213100 875800 0 732730 0 0 2710000 0 2590500 6864500 52950 2683 47530 444692;444693;444694;444695;444696;444697 351526 351526 1 TPSSCSSSLDSIK Unmodified 1367.6239 0.62385968 3453 Q8NG31 CASC5 Protein CASC5 yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 34.534 34.884 2 0.025349 37896 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 36.252 15.381 13876000 0 0 0 0 0 0 0 3937400 0 3997100 0 5941900 0 0 0 52951 3453 47531 444698;444699;444700 351527 351527 1 TPSSDVLVFDYTK Unmodified 1470.7242 0.72422566 2615;2169 Q09028;Q16576 RBBP4;RBBP7 Histone-binding protein RBBP4;Histone-binding protein RBBP7 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.41 3.94 9 1 12 3 5 2 1 1 1 1 1 1 1 1 1 1 1 1 79.074 77.467 2;3 5.6269E-76 97873 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 218.15 202.52 10759000000 337660000 6343100000 448920000 195540000 173190000 188240000 221430000 176350000 192660000 287680000 432420000 472490000 235830000 326900000 727060000 52952 2169;2615 47532 444701;444702;444703;444704;444705;444706;444707;444708;444709;444710;444711;444712;444713;444714;444715;444716;444717;444718;444719;444720;444721;444722 351528;351529;351530;351531;351532;351533;351534;351535;351536;351537;351538;351539;351540;351541;351542;351543;351544;351545;351546;351547;351548;351549 351540 22 TPSSFRQPFTPTSR Unmodified 1607.8056 0.80560429 1797 P57740 NUP107 Nuclear pore complex protein Nup107 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.769 48.928 3 0.00023797 55225 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 76.358 69.574 345630000 0 0 0 13006000 12261000 23175000 19797000 18873000 13826000 27309000 38668000 44363000 34842000 38011000 61494000 52953 1797 47533 444723;444724;444725;444726;444727;444728;444729;444730;444731;444732;444733;444734 351550;351551;351552;351553;351554;351555;351556 351555 5 TPSSNTLDDYMSCFR Unmodified 1792.7396 0.7396345 1331 P33981 TTK Dual specificity protein kinase TTK yes yes 0 0 0 By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 79.712 79.862 2 6.7387E-05 92032 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.088 71.766 23800000 0 0 0 0 0 0 0 0 1567200 2292700 3277300 4221100 1452800 3666600 7322400 52954 1331 47534 444735;444736;444737;444738;444739;444740;444741 351557;351558;351559 351557 3 TPSSNTLDDYMSCFR Oxidation (M) 1808.7345 0.73454912 1331 P33981 TTK Dual specificity protein kinase TTK yes yes 0 1 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 63.443 63.551 2 1.8661E-05 72696 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 85.845 70.643 14952000 0 0 0 0 0 3445400 3798700 0 3308400 0 0 0 4399300 0 0 52955 1331 47534 444742;444743;444744;444745;444746;444747 351560;351561;351562 351562 1992 3 TPSSSPPITPPASETK Unmodified 1595.8043 0.80426689 4769 Q9NZJ0 DTL Denticleless protein homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.215 43.389 2 2.3185E-23 48423 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 134.99 110.2 166690000 0 0 0 13153000 11599000 13826000 14418000 10003000 8696000 14583000 14546000 18120000 15286000 11681000 20783000 52956 4769 47535 444748;444749;444750;444751;444752;444753;444754;444755;444756;444757;444758;444759 351563;351564;351565;351566;351567;351568;351569;351570;351571;351572;351573;351574 351569 12 TPSSSQPER Unmodified 987.46214 0.46213773 323 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 6.0529 6.1599 2 0.013016 3956 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 60.436 15.355 12042000 0 0 0 1504700 1042100 1622000 1557900 1233200 1959100 0 1404800 0 0 599900 1118400 52957 323 47536 444760;444761;444762;444763;444764;444765;444766;444767;444768 351575;351576;351577;351578;351579;351580;351581 351579 7 TPSSSQPERLPIGNTIQPSQAATFMNDAIEK Oxidation (M) 3343.6354 0.63543401 323 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 77.789 77.895 3 2.5889E-113 89916 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 130.75 126.88 190700000 0 0 0 0 10396000 17261000 7162300 21614000 12273000 28146000 23449000 19491000 11681000 14476000 24745000 52958 323 47537 444769;444770;444771;444772;444773;444774;444775;444776;444777;444778;444779 351582;351583;351584;351585;351586;351587;351588;351589;351590;351591;351592;351593;351594;351595;351596;351597 351585 411 16 TPSSSSLSQR Unmodified 1048.5149 0.51490158 4329 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.212 14.375 2 1.5177E-06 13869 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 134.26 117.79 359750000 0 0 0 20733000 28066000 24111000 20345000 20813000 17153000 34879000 32844000 46439000 38058000 28430000 47879000 52959 4329 47538 444780;444781;444782;444783;444784;444785;444786;444787;444788;444789;444790;444791 351598;351599;351600;351601;351602;351603;351604;351605;351606;351607;351608 351600 8 TPSSWNENPSK Unmodified 1245.5626 0.56258006 5055 Q9UPQ9 TNRC6B Trinucleotide repeat-containing gene 6B protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.55 1 1 4 2 1 1 1 1 25.913 24.508 2 0.0080158 26320 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 52.579 45.099 23654000 0 9956400 0 0 3427000 0 4247000 2185500 0 0 0 0 0 3838400 0 52960 5055 47539 444792;444793;444794;444795;444796;444797 351609;351610;351611 351611 3 TPSTEAAHIMLR Unmodified 1325.6762 0.67617003 2136 Q07157 TJP1 Tight junction protein ZO-1 yes yes 0 0 0 By MS/MS 10 0 1 1 49.046 49.769 3 0.049218 55234 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.616 35.083 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52961 2136 47540 444798 351612 351612 1 TPSTMENDSSNLDPSQAPSLAQPLVFSNSK Oxidation (M) 3177.4772 0.47720203 2380 Q14157 UBAP2L Ubiquitin-associated protein 2-like yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 82.726 82.274 3 7.5323E-58 100429 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.25 105.35 1350700000 0 156120000 0 51010000 119420000 126210000 141850000 0 149450000 0 0 201970000 112460000 124490000 167740000 52962 2380 47541 444799;444800;444801;444802;444803;444804;444805;444806;444807;444808 351613;351614;351615;351616;351617;351618;351619;351620;351621;351622 351615 3877 10 TPSTMENDSSNLDPSQAPSLAQPLVFSNSK Unmodified 3161.4823 0.48228741 2380 Q14157 UBAP2L Ubiquitin-associated protein 2-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.25 2.26 1 1 18 2 2 2 2 2 2 2 2 1 1 1 1 84.17 83.858 3;4 3.2864E-118 102527 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 144.74 141.09 606950000 0 171460000 0 0 30444000 29201000 23710000 43354000 31310000 53046000 51865000 30072000 16638000 24877000 100970000 52963 2380 47541 444809;444810;444811;444812;444813;444814;444815;444816;444817;444818;444819;444820;444821;444822;444823;444824;444825;444826;444827;444828 351623;351624;351625;351626;351627;351628;351629;351630;351631;351632;351633;351634;351635;351636;351637;351638;351639 351628 17 TPSVSAPLALSCPR Unmodified 1454.7551 0.75514863 4885 Q9UGP4 LIMD1 LIM domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 70.1 70.219 2 7.0157E-06 80058 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 119.03 96.123 57069000 0 0 0 3022500 0 4977000 3652500 0 3173900 4875100 8724600 8027700 6256800 5202800 9156000 52964 4885 47542 444829;444830;444831;444832;444833;444834;444835;444836;444837;444838 351640;351641;351642;351643;351644;351645;351646;351647;351648 351643 9 TPSVSLTSVHPDLMK Oxidation (M) 1626.8287 0.8287075 2020 P86791;P86790 CCZ1;CCZ1B Vacuolar fusion protein CCZ1 homolog;Vacuolar fusion protein CCZ1 homolog B yes no 0 1 0 By MS/MS By MS/MS By matching 2 0 4 2 1 1 70.98 64.476 2;3 3.0025E-50 85308 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 164.9 132.17 126330000 77893000 46503000 1938400 0 0 0 0 0 0 0 0 0 0 0 0 52965 2020 47543 444839;444840;444841;444842 351649;351650;351651;351652 351652 3274 4 TPSVSLTSVHPDLMK Unmodified 1610.8338 0.83379288 2020 P86791;P86790 CCZ1;CCZ1B Vacuolar fusion protein CCZ1 homolog;Vacuolar fusion protein CCZ1 homolog B yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 4 3.46 3 1 1 1 1 1 76.534 72.727 3 0.000227 93567 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.759 65.436 242310000 115740000 98580000 18731000 0 0 0 0 0 0 0 0 0 0 0 9257300 52966 2020 47543 444843;444844;444845;444846 351653;351654;351655;351656;351657 351656 5 TPTAPAVNLAGAR Unmodified 1237.6779 0.67788459 5066 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.805 52.948 2 9.458E-07 58542 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.667 71.581 549650000 0 0 0 37033000 37135000 25132000 54031000 42768000 28428000 48952000 49241000 38607000 61298000 77734000 49287000 52967 5066 47544 444847;444848;444849;444850;444851;444852;444853;444854;444855;444856;444857;444858 351658;351659;351660;351661;351662;351663;351664;351665;351666;351667;351668 351661 11 TPTAVVAPVEK Unmodified 1110.6285 0.62847478 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 41.954 41.168 2 7.8832E-23 52449 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 188.91 126.8 355320000 0 73092000 1576400 15464000 15435000 17438000 18146000 15279000 16356000 23480000 33194000 35351000 22352000 25204000 42958000 52968 1286 47545 444859;444860;444861;444862;444863;444864;444865;444866;444867;444868;444869;444870;444871;444872;444873 351669;351670;351671;351672;351673;351674;351675;351676;351677;351678;351679;351680;351681;351682;351683;351684;351685;351686 351673 17 TPTEALASFDYIVR Unmodified 1581.8039 0.80387296 4441 Q9H7Z7 PTGES2 Prostaglandin E synthase 2;Prostaglandin E synthase 2 truncated form yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 86.883 86.965 2 1.9537E-17 100553 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 124.42 91.817 29085000 0 0 0 0 2861300 0 0 0 0 5281600 5537100 3930500 1403600 1790900 8280200 52969 4441 47546 444874;444875;444876;444877;444878;444879;444880 351687;351688;351689;351690;351691;351692;351693 351688 7 TPTEAPADCR Unmodified 1116.487 0.48697227 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.309 13.464 2 0.00055012 12614 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 123.86 113.45 112210000 0 0 0 4851400 4815000 11940000 4460600 4396900 4736600 8002800 9991100 14592000 11059000 13476000 19887000 52970 3119 47547 444881;444882;444883;444884;444885;444886;444887;444888;444889;444890;444891;444892 351694;351695;351696;351697;351698;351699 351697 5 TPTEAPADCRALIDK Unmodified 1656.8141 0.81412007 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.33 0.471 2 1 1 1 1 48.089 42.546 3 0.0029741 53846 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 57.328 39.821 45620000 12756000 23179000 9684700 0 0 0 0 0 0 0 0 0 0 0 0 52971 3119 47548 444893;444894;444895 351700;351701;351702 351702 3 TPTGDEFVK Unmodified 992.48148 0.48147619 1234 P28340 POLD1 DNA polymerase delta catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 32.63 32.819 2 0.0032698 36343 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 93.162 48.441 352890000 0 0 0 25559000 25213000 43337000 21929000 21518000 0 34070000 34365000 41367000 38976000 25001000 41560000 52972 1234 47549 444896;444897;444898;444899;444900;444901;444902;444903;444904;444905;444906 351703;351704;351705;351706;351707;351708;351709;351710;351711;351712;351713;351714 351713 12 TPTLQPTPEVHNGLR Unmodified 1658.874 0.87401821 464 O75152;A0A1B0GTU1 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.056 49.214 3 2.1036E-20 55267 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 102.73 70.103 390040000 0 0 0 20036000 25998000 28800000 36874000 26085000 24854000 31401000 36841000 36112000 42854000 31706000 48483000 52973 464 47550 444907;444908;444909;444910;444911;444912;444913;444914;444915;444916;444917;444918 351715;351716;351717;351718;351719;351720;351721;351722;351723;351724;351725;351726;351727;351728;351729;351730 351721 16 TPTLYLDFK Unmodified 1096.5805 0.58046195 172 O00625 PIR Pirin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 79.487 79.526 2 0.00077794 91445 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 144.12 112.82 134490000 0 0 0 3069000 3688900 7038300 4964800 0 3007000 0 24215000 15605000 0 14392000 58510000 52974 172 47551 444919;444920;444921;444922;444923;444924;444925;444926;444927 351731;351732;351733;351734;351735;351736;351737;351738 351734 8 TPTNTWSGLGFSK Unmodified 1394.683 0.68302954 4412 Q9H694 BICC1 Protein bicaudal C homolog 1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 71.537 71.666 2 0.0072397 82382 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 50.95 40.121 39477000 0 0 0 0 1646500 3178600 2036100 3934300 2270600 3796300 7088600 4545900 2389000 3001200 5589900 52975 4412 47552 444928;444929;444930;444931;444932;444933;444934;444935;444936;444937;444938 351739;351740;351741 351741 3 TPTPAGPTIMPLIR Oxidation (M) 1479.8119 0.81193523 3949 Q96PU8 QKI Protein quaking yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.457 74.52 2 8.4732E-06 84987 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 89.171 68.868 247500000 0 0 0 16886000 16455000 14567000 24442000 16481000 17643000 24559000 26430000 25651000 26223000 18857000 19309000 52976 3949 47553 444939;444940;444941;444942;444943;444944;444945;444946;444947;444948;444949;444950 351742;351743;351744;351745;351746;351747;351748;351749;351750;351751;351752;351753 351750 5434 12 TPTPAGPTIMPLIR Unmodified 1463.817 0.8170206 3949 Q96PU8 QKI Protein quaking yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 83.195 83.258 2 2.8847E-19 96681 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 149.23 118.98 247550000 0 0 0 7998300 10437000 14173000 11510000 15455000 13580000 21688000 29693000 26365000 18628000 26609000 51415000 52977 3949 47553 444951;444952;444953;444954;444955;444956;444957;444958;444959;444960;444961;444962 351754;351755;351756;351757;351758;351759;351760;351761;351762;351763;351764;351765;351766;351767;351768;351769;351770 351767 17 TPTPEPAEVETRK Unmodified 1453.7413 0.7412727 4913 Q9UHY1 NRBP1 Nuclear receptor-binding protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 4 2 12 1 4 1 1 1 1 1 1 1 1 1 1 1 1 1 29.595 28.197 2;3 8.0524E-35 36670 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 151.74 136.7 300700000 15477000 120310000 8457700 6895100 8007700 13890000 8890600 7503200 5600000 13266000 18284000 23155000 13847000 9803900 27316000 52978 4913 47554 444963;444964;444965;444966;444967;444968;444969;444970;444971;444972;444973;444974;444975;444976;444977;444978;444979;444980 351771;351772;351773;351774;351775;351776;351777;351778;351779;351780;351781;351782;351783;351784;351785;351786;351787;351788;351789;351790;351791 351775 21 TPTPEPFDSETRK Unmodified 1503.7205 0.72053726 4631 Q9NSY0 NRBP2 Nuclear receptor-binding protein 2 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 40.341 35.907 3 1.4752E-08 46882 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.14 96.482 50518000 0 42880000 7638100 0 0 0 0 0 0 0 0 0 0 0 0 52979 4631 47555 444981;444982;444983 351792;351793;351794 351792 3 TPTPPAPTLLK Unmodified 1134.6649 0.66486028 2433 Q14686 NCOA6 Nuclear receptor coactivator 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64.039 63.432 2 0.00034129 73001 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 99.688 65.599 242420000 0 110810000 1211500 6723000 6317300 7777500 10389000 9606700 6428900 10166000 11525000 17268000 12163000 16459000 15580000 52980 2433 47556 444984;444985;444986;444987;444988;444989;444990;444991;444992;444993;444994;444995;444996;444997 351795;351796;351797;351798;351799;351800;351801;351802;351803;351804;351805;351806;351807;351808;351809 351805 15 TPTPPEVTK Unmodified 968.51786 0.51786169 3256 Q8IX90 SKA3 Spindle and kinetochore-associated protein 3 yes yes 0 0 0 By matching By MS/MS By matching 10 0 3 1 1 1 28.779 29.218 2 0.0089939 31166 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 68.016 35.124 36846000 0 0 0 0 0 0 0 0 0 7670900 13575000 0 0 0 15600000 52981 3256 47557 444998;444999;445000 351810 351810 1 TPTPSTPGDTQPNTPAPVPPAEDGIK Unmodified 2584.2657 0.26567634 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.64 1.76 1 24 1 2 1 3 2 2 2 2 2 2 2 2 2 66.267 66.596 2;3 6.2274E-28 74257 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 88.329 84.867 372850000 25637000 0 0 21717000 16932000 29327000 25851000 23441000 23762000 30862000 34656000 39321000 34690000 27149000 39503000 52982 2451 47558 445001;445002;445003;445004;445005;445006;445007;445008;445009;445010;445011;445012;445013;445014;445015;445016;445017;445018;445019;445020;445021;445022;445023;445024;445025 351811;351812;351813;351814;351815;351816;351817;351818;351819;351820;351821;351822;351823;351824;351825;351826;351827;351828;351829;351830;351831;351832;351833 351822 23 TPTQLEGATR Unmodified 1072.5513 0.55128709 583 O94776 MTA2 Metastasis-associated protein MTA2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.381 23.585 2 0.00031972 24143 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 139.38 69.38 778790000 0 0 0 50566000 45333000 61504000 48241000 43718000 33376000 91346000 61322000 89004000 95644000 75440000 83293000 52983 583 47559 445026;445027;445028;445029;445030;445031;445032;445033;445034;445035;445036;445037 351834;351835;351836;351837;351838;351839;351840;351841;351842;351843;351844;351845;351846 351844 10 TPTQTNGSNVPFK Unmodified 1389.6888 0.6888432 1977 P78347 GTF2I General transcription factor II-I yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.43 37.61 2 2.0205E-16 40334 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 167.09 137.42 238040000 0 0 0 10097000 10045000 40278000 6870000 9345300 20890000 21016000 21311000 24425000 27697000 18245000 27820000 52984 1977 47560 445038;445039;445040;445041;445042;445043;445044;445045;445046;445047;445048;445049 351847;351848;351849;351850;351851;351852;351853;351854;351855;351856;351857;351858;351859;351860 351850 14 TPTQTNGSNVPFKPR Unmodified 1642.8427 0.84271808 1977 P78347 GTF2I General transcription factor II-I yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.985 37.166 3 1.067E-35 40315 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 155.57 147.01 2121100000 0 0 0 126930000 136660000 154230000 131340000 121780000 97629000 203590000 215430000 300990000 218410000 168550000 245590000 52985 1977 47561 445050;445051;445052;445053;445054;445055;445056;445057;445058;445059;445060;445061 351861;351862;351863;351864;351865;351866;351867;351868;351869;351870;351871;351872 351870 12 TPTSGQSVSTCSSK Unmodified 1425.6406 0.64057238 2662 Q32NC0 C18orf21 UPF0711 protein C18orf21 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 10.499 10.661 2 0.0012965 8482 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 59.542 50.679 12886000 0 0 0 0 950910 1220900 1540200 683310 986960 0 1625500 1944100 0 1808600 2125700 52986 2662 47562 445062;445063;445064;445065;445066;445067;445068;445069;445070 351873;351874;351875;351876;351877;351878 351877 5 TPTSSPASSPLVAK Unmodified 1341.714 0.71399532 2432 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 39.484 39.242 2 2.416E-14 49261 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 135.8 107.07 70582000 0 23249000 0 0 3486300 4236400 3055800 0 4228600 5567600 5859800 5491600 5183900 4112100 6110600 52987 2432 47563 445071;445072;445073;445074;445075;445076;445077;445078;445079;445080;445081 351879;351880;351881;351882;351883;351884;351885;351886;351887;351888;351889;351890 351882 12 TPTSTPVHVK Unmodified 1065.5819 0.58185893 5000 Q9ULM3 YEATS2 YEATS domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 18.768 18.913 2 0.009388 19421 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 57.859 38.072 22411000 0 0 0 1651800 2572300 2415200 1393600 1541300 0 3357500 3169700 5280400 0 1028900 0 52988 5000 47564 445082;445083;445084;445085;445086;445087;445088;445089;445090 351891;351892 351892 2 TPTTILLTPERK Unmodified 1368.7977 0.79766537 315 O43301 HSPA12A Heat shock 70 kDa protein 12A yes yes 0 0 1 By MS/MS 2 0 2 2 65.989 57.694 2;3 2.3516E-06 77368 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 125.75 109.21 113580000 113580000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52989 315 47565 445091;445092 351893;351894;351895 351893 2 TPTTNAVHK Unmodified 967.50869 0.50869399 2811 Q5VT66 MARC1 Mitochondrial amidoxime-reducing component 1 yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 8.2203 4.7772 2 0.00051001 8257 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 124.08 90.438 45107000 24140000 20967000 0 0 0 0 0 0 0 0 0 0 0 0 0 52990 2811 47566 445093;445094 351896 351896 1 TPTVIHK Unmodified 794.46504 0.46503826 4263 Q9BZE4 GTPBP4 Nucleolar GTP-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 15.336 12.051 2 0.032088 15969 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.866 42.255 322980000 168970000 95111000 58900000 0 0 0 0 0 0 0 0 0 0 0 0 52991 4263 47567 445095;445096;445097 351897;351898;351899 351897 3 TPTYREPVSDYQVLR Unmodified 1822.9214 0.92136233 3121 Q7Z7C8 TAF8 Transcription initiation factor TFIID subunit 8 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.515 60.62 3 0.00094051 69069 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 51.727 46.044 57912000 0 0 0 2830100 3070200 3118800 4243800 5402300 3348800 5400700 4917400 7572500 4738500 4629000 8640300 52992 3121 47568 445098;445099;445100;445101;445102;445103;445104;445105;445106;445107;445108;445109 351900;351901;351902;351903;351904;351905;351906;351907;351908 351907 9 TPVANQSSNLTATQMSFPVQGVHTVAQTVSR Oxidation (M) 3271.6255 0.62553802 2852 Q68CP9 ARID2 AT-rich interactive domain-containing protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 76.569 76.661 3 1.5525E-112 88121 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 126.52 121.04 78774000 0 0 0 0 5688700 9580000 0 6198500 0 12263000 8676900 11805000 5813500 0 18748000 52993 2852 47569 445110;445111;445112;445113;445114;445115;445116;445117 351909;351910;351911;351912;351913;351914;351915;351916 351911 4508 8 TPVDESDDEIQHDEIPTGK Unmodified 2123.9495 0.94948716 3134 Q86TC9 MYPN Myopalladin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 50.112 50.029 3 0.0010071 55650 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 51.798 47.957 20816000 0 0 0 0 6136800 0 7593200 0 0 0 0 0 0 7085700 0 52994 3134 47570 445118;445119;445120 351917;351918;351919 351918 3 TPVDRDTEDGLK Unmodified 1344.6521 0.65212334 4678 Q9NVR0 KLHL11 Kelch-like protein 11 yes yes 0 0 1 By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 21.756 21.988 3 0.010673 22437 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 42.809 25.867 73842000 0 0 0 5887100 5109500 0 6002300 4790800 5410400 0 6819600 12436000 9955700 6466300 10964000 52995 4678 47571 445121;445122;445123;445124;445125;445126;445127;445128;445129;445130 351920 351920 1 TPVEEVPAAIAPFQGR Unmodified 1680.8835 0.88352026 2528 Q15393 SF3B3 Splicing factor 3B subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.15 2.41 2 1 24 1 2 2 2 2 2 2 2 2 2 2 2 2 2 80.541 80.296 2;3 9.9332E-60 92495 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 218.18 195.3 2723400000 278330 56411000 0 81738000 156300000 173560000 145480000 169280000 134000000 236810000 270110000 335330000 208030000 291890000 464200000 52996 2528 47572 445131;445132;445133;445134;445135;445136;445137;445138;445139;445140;445141;445142;445143;445144;445145;445146;445147;445148;445149;445150;445151;445152;445153;445154;445155;445156;445157 351921;351922;351923;351924;351925;351926;351927;351928;351929;351930;351931;351932;351933;351934;351935;351936;351937;351938;351939 351925 19 TPVEEVPAAIAPFQGRVLIGVGK Unmodified 2347.3264 0.32636652 2528 Q15393 SF3B3 Splicing factor 3B subunit 3 yes yes 0 0 1 By MS/MS 2 0 1 1 94.957 86.826 3 1.6391E-07 112303 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.411 67.229 12904000 12904000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 52997 2528 47573 445158 351940 351940 1 TPVEPEVAIHR Unmodified 1246.667 0.66698555 1817 P60866 RPS20 40S ribosomal protein S20 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 42.792 42.968 2;3 1.1458E-07 48115 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 111.86 85.81 2453300000 0 0 0 131070000 148710000 137520000 158750000 145340000 119010000 152800000 304250000 309410000 233250000 216880000 396280000 52998 1817 47574 445159;445160;445161;445162;445163;445164;445165;445166;445167;445168;445169;445170;445171;445172;445173;445174;445175;445176;445177;445178;445179;445180;445181;445182 351941;351942;351943;351944;351945;351946;351947;351948;351949;351950;351951;351952;351953;351954;351955;351956;351957;351958;351959 351952 13 TPVEVPVGGFK Unmodified 1128.6179 0.61791009 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.31 3.1 1 2 10 3 1 1 1 1 1 1 1 1 1 1 67.636 66.803 2 0.00026662 77331 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 92.051 62.578 275580000 0 166720000 0 17104000 19823000 0 14689000 0 0 18929000 0 23574000 0 14740000 0 52999 2501 47575 445183;445184;445185;445186;445187;445188;445189;445190;445191;445192;445193;445194;445195 351960;351961;351962;351963;351964;351965;351966;351967;351968;351969;351970;351971;351972;351973;351974 351973 14 TPVFIFER Unmodified 1007.544 0.54401687 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 78.059 78.203 2 0.028576 89819 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.659 45.248 47857000 0 0 0 0 0 6837700 3161200 2855700 0 5307000 3495600 6021900 4762600 5765000 9650200 53000 2775 47576 445196;445197;445198;445199;445200;445201;445202;445203;445204 351975 351975 1 TPVIDADKPVSSQLR Unmodified 1624.8784 0.87843489 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By matching 10 0 4 1 1 1 1 51.431 51.535 3 0.048955 58135 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 25.423 17.081 32781000 0 0 0 0 4509200 0 8979800 0 0 9050300 0 10241000 0 0 0 53001 2392 47577 445205;445206;445207;445208 351976 351976 1 TPVIVTLK Unmodified 869.5586 0.5586043 5206 Q9Y4L1 HYOU1 Hypoxia up-regulated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.18 3.74 3 1 7 1 2 1 1 1 1 1 1 1 1 60.652 58.792 2 0.012067 77087 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.29 35.58 1383200000 772430000 404760000 49148000 0 0 0 0 0 9278300 19573000 24126000 24752000 13584000 23847000 41720000 53002 5206 47578 445209;445210;445211;445212;445213;445214;445215;445216;445217;445218;445219 351977;351978;351979;351980;351981;351982;351983;351984 351977 7 TPVLFDIYEIK Unmodified 1336.7279 0.72785447 1643 P50995 ANXA11 Annexin A11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 91.879 90.764 2 2.4428E-09 114218 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 142.83 132.12 176530000 25889000 54190000 23450000 1850800 2061400 6765900 2881200 3946900 3365200 10317000 5240100 6487700 2797600 6533200 20753000 53003 1643 47579 445220;445221;445222;445223;445224;445225;445226;445227;445228;445229;445230;445231;445232;445233;445234;445235 351985;351986;351987;351988;351989;351990;351991;351992;351993;351994;351995;351996;351997;351998;351999;352000;352001 351994 17 TPVPAGEEEGELGEYRQK Unmodified 1987.9487 0.9486993 3891 Q96JC1 VPS39 Vam6/Vps39-like protein yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 52.25 47.394 3 0.030954 61444 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 17.069 13.349 23162000 0 20082000 3080900 0 0 0 0 0 0 0 0 0 0 0 0 53004 3891 47580 445236;445237 352002 352002 1 TPVPSDIDISR Unmodified 1198.6194 0.61936665 953 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 57.312 56.787 2 0.00028579 64610 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 109.66 65.856 973940000 12305000 0 0 56641000 47424000 92112000 81858000 71103000 58917000 65868000 83445000 104350000 73026000 70825000 156070000 53005 953 47581 445238;445239;445240;445241;445242;445243;445244;445245;445246;445247;445248;445249;445250 352003;352004;352005;352006;352007;352008;352009;352010;352011;352012;352013;352014 352009 12 TPVPSDIDISRSCK Unmodified 1573.777 0.77700628 953 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS 2.4 0.49 3 2 4 1 54.195 49.134 2;3 0.00059818 61220 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 82.55 68.292 883390000 0 831150000 52237000 0 0 0 0 0 0 0 0 0 0 0 0 53006 953 47582 445251;445252;445253;445254;445255 352015;352016;352017;352018 352018 3 TPVPSTVQANTFEFADAEEDDEVKV Unmodified 2737.2607 0.26065054 2039 Q00587 CDC42EP1 Cdc42 effector protein 1 yes yes 0 0 1 By MS/MS 10 0 1 1 84.864 84.966 3 0.00038908 98466 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 29.959 26.497 4988700 0 0 0 0 0 0 0 0 0 4988700 0 0 0 0 0 53007 2039 47583 445256 352019 352019 1 TPVQAAAVSIVEK Unmodified 1311.7398 0.73981614 3999 Q96T58 SPEN Msx2-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 64.461 64.545 2 1.6623E-08 73066 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 109.39 79.071 57737000 0 0 0 3690200 4172100 3100200 4923100 4952900 3662400 6914300 5941300 8193000 0 4216400 7970700 53008 3999 47584 445257;445258;445259;445260;445261;445262;445263;445264;445265;445266;445267 352020;352021;352022;352023;352024;352025;352026;352027;352028;352029;352030;352031 352024 12 TPVQYSQQQNSPQK Unmodified 1631.7903 0.79034816 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.35 21.558 2 1.3414E-283 21941 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 253.97 228.27 139640000 0 0 0 8324500 9948500 11096000 12055000 0 14383000 11149000 16064000 13756000 12204000 15707000 14957000 53009 1492 47585 445268;445269;445270;445271;445272;445273;445274;445275;445276;445277;445278;445279 352032;352033;352034;352035;352036;352037;352038;352039;352040;352041;352042;352043 352041 12 TPVSDRVTK Unmodified 1001.5506 0.55055881 64 CON__P02768-1;P02768 ALB Serum albumin yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11.622 11.289 2 2.8955E-05 10245 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 169.44 95.822 + 543220000 36143000 0 3951400 138410000 6070400 7991300 5091100 246670000 6194600 14168000 12400000 19168000 29771000 6496300 10698000 53010 64 47586 445280;445281;445282;445283;445284;445285;445286;445287;445288;445289;445290;445291;445292;445293 352044;352045;352046;352047 352046 1 TPVSEDMLGR Unmodified 1103.5281 0.52810881 1121;1018 P21281;P15313 ATP6V1B2;ATP6V1B1 V-type proton ATPase subunit B, brain isoform;V-type proton ATPase subunit B, kidney isoform no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 46.604 46.708 2 0.0021721 51384 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 85.862 54.558 90147000 0 0 0 9641100 4444500 10727000 6815800 6731700 0 0 12841000 0 6365800 10645000 21935000 53011 1121;1018 47587 445294;445295;445296;445297;445298;445299;445300;445301;445302;445303 352048;352049;352050;352051;352052;352053;352054;352055;352056;352057 352053 10 TPVSGSLK Unmodified 787.44397 0.44396847 3465 Q8NI27 THOC2 THO complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 17.853 17.822 2 0.049549 18025 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 47.082 13.39 45131000 0 0 0 0 15329000 15669000 0 14133000 0 0 0 0 0 0 0 53012 3465 47588 445304;445305;445306 352058 352058 1 TPVSITEHPK Unmodified 1107.5924 0.59242362 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 26.06 25.112 2 4.8674E-06 32001 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 145.72 122.29 855860000 196390000 373710000 149930000 10257000 8930000 13524000 11061000 12425000 7144300 10490000 7287100 11722000 12909000 13133000 16960000 53013 2392 47589 445307;445308;445309;445310;445311;445312;445313;445314;445315;445316;445317;445318;445319;445320;445321;445322 352059;352060;352061;352062;352063;352064;352065;352066;352067;352068;352069;352070;352071;352072;352073;352074;352075;352076 352064 18 TPVTDPATGAVK Unmodified 1155.6136 0.61355299 1591 P49748 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9 2.65 2 14 1 1 2 1 1 1 2 1 1 1 1 1 1 1 32.88 32.298 2 5.4838E-17 36179 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 151.22 111.21 634960000 4690100 36029000 0 37348000 36086000 42273000 39949000 45648000 31732000 59202000 79645000 75230000 47537000 34047000 65541000 53014 1591 47590 445323;445324;445325;445326;445327;445328;445329;445330;445331;445332;445333;445334;445335;445336;445337;445338 352077;352078;352079;352080;352081;352082;352083;352084;352085;352086;352087 352086 9 TPVTEQEEK Unmodified 1059.5084 0.50841922 4633 Q9NTI5 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 9.4493 9.6052 2 0.02171 7983 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 80.455 58.324 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53015 4633 47591 445339;445340;445341 352088;352089;352090 352090 3 TPVTLGSDQPLLR Unmodified 1395.7722 0.7721789 1187 P25391 LAMA1 Laminin subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.467 71.539 2 1.0298E-11 82059 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 122.26 77.121 78723000 0 0 0 3056500 3808300 6205600 3309300 5567300 4432300 6694800 7184200 11086000 8330100 7822600 11226000 53016 1187 47592 445342;445343;445344;445345;445346;445347;445348;445349;445350;445351;445352;445353 352091;352092;352093;352094;352095;352096;352097;352098;352099;352100;352101;352102 352093 12 TPVVQNAASIVQPSPAHVGQQGLSK Unmodified 2512.3398 0.33978476 3594 Q8WXI9 GATAD2B Transcriptional repressor p66-beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68.832 67.953 3 1.4756E-101 77820 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 153.87 146.42 671290000 45494000 23961000 0 33641000 31851000 47014000 38910000 39433000 33489000 67889000 46528000 76698000 55840000 48571000 81970000 53017 3594 47593 445354;445355;445356;445357;445358;445359;445360;445361;445362;445363;445364;445365;445366;445367 352103;352104;352105;352106;352107;352108;352109;352110;352111;352112;352113;352114;352115;352116;352117;352118;352119;352120;352121 352104 19 TPWDETDHIDK Unmodified 1355.5994 0.59935949 2224 Q13017 ARHGAP5 Rho GTPase-activating protein 5 yes yes 0 0 0 By matching By MS/MS By matching 2 0 3 1 1 1 47.359 41.624 3 0.038109 54653 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 35.523 28.825 18406000 3763000 13838000 805200 0 0 0 0 0 0 0 0 0 0 0 0 53018 2224 47594 445368;445369;445370 352122 352122 1 TPYGASIFQSK Unmodified 1197.603 0.60298831 2104;2103;2105 Q04725;Q04724;Q04726;Q04727 TLE2;TLE1;TLE3;TLE4 Transducin-like enhancer protein 2;Transducin-like enhancer protein 1;Transducin-like enhancer protein 3;Transducin-like enhancer protein 4 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.495 59.604 2 6.3401E-05 67632 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 139.39 128.68 322530000 0 0 0 24202000 15866000 20442000 22934000 27540000 17041000 28057000 24919000 30567000 28359000 28636000 53970000 53019 2103;2104;2105 47595 445371;445372;445373;445374;445375;445376;445377;445378;445379;445380;445381;445382 352123;352124;352125;352126;352127;352128;352129;352130;352131;352132;352133;352134 352128 12 TPYIVLSGSGK Unmodified 1120.6128 0.61282471 312 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 58.163 56.753 2 0.0012891 75888 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.142 71.36 433520000 56678000 285090000 0 10980000 9338800 4159100 13923000 14041000 9324000 0 0 27331000 0 2656900 0 53020 312 47596 445383;445384;445385;445386;445387;445388;445389;445390;445391;445392 352135;352136;352137;352138;352139;352140;352141;352142 352138 8 TPYTDVNIVTIR Unmodified 1390.7456 0.7456298 1615 P50213 IDH3A Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.213 75.272 2 2.621E-05 86886 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 94.616 67.135 54727000 0 0 0 2500900 2754700 4264700 4887500 3178900 2994200 8691200 5627200 6738500 2876500 4084600 6128100 53021 1615 47597 445393;445394;445395;445396;445397;445398;445399;445400;445401;445402;445403;445404 352143;352144;352145;352146;352147;352148;352149;352150;352151;352152;352153;352154 352152 12 TPYTIMFGPDK Oxidation (M) 1284.606 0.60602477 1227 P27824 CANX Calnexin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68.038 67.016 2 3.1967E-37 77305 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 182.39 173.93 540260000 50344000 3120400 5769900 29115000 38245000 39988000 37463000 31963000 36517000 42461000 48133000 69021000 40750000 34204000 33165000 53022 1227 47598 445405;445406;445407;445408;445409;445410;445411;445412;445413;445414;445415;445416;445417;445418;445419 352155;352156;352157;352158;352159;352160;352161;352162;352163;352164;352165;352166;352167;352168;352169;352170;352171;352172;352173 352173 1815 18 TPYTIMFGPDK Unmodified 1268.6111 0.61111015 1227 P27824 CANX Calnexin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76.379 75.665 2 6.722E-12 86896 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 157.59 143.43 699860000 98542000 0 6093400 25844000 35480000 40323000 32298000 53329000 35629000 57765000 60617000 80811000 46333000 50080000 76712000 53023 1227 47598 445420;445421;445422;445423;445424;445425;445426;445427;445428;445429;445430;445431;445432;445433 352174;352175;352176;352177;352178;352179;352180;352181;352182;352183;352184;352185;352186;352187;352188 352176 15 TQAAGPVSQGK Unmodified 1042.5407 0.5407224 2171 Q09472 EP300 Histone acetyltransferase p300 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 8.7175 8.8817 2 0.0080511 7260 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 52.49 35.526 2435200 0 0 0 0 0 0 0 1134500 0 1300700 0 0 0 0 0 53024 2171 47599 445434;445435 352189 352189 1 TQAASVEAVK Unmodified 1002.5346 0.53457439 1556 P49005 POLD2 DNA polymerase delta subunit 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 2 20.013 20.275 2 0.0051532 20606 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 70.1 7.6358 143170000 0 0 0 0 0 27640000 8283000 0 22782000 11462000 8039600 6859500 13880000 44228000 0 53025 1556 47600 445436;445437;445438;445439;445440;445441;445442;445443;445444 352190;352191;352192 352190 3 TQADELPACLLSAAR Unmodified 1614.8036 0.80355538 919 P10398 ARAF Serine/threonine-protein kinase A-Raf yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.762 82.825 2 8.6105E-07 96258 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 84.892 68.929 88746000 0 0 0 2250400 3929700 5575400 4075400 6461100 4388800 8474600 7297800 6849000 7529000 12520000 19395000 53026 919 47601 445445;445446;445447;445448;445449;445450;445451;445452;445453;445454;445455;445456 352193;352194;352195;352196;352197;352198;352199;352200;352201;352202;352203 352200 11 TQAFEADNLK Unmodified 1135.551 0.55095274 2296 Q13464 ROCK1 Rho-associated protein kinase 1 yes yes 0 0 0 By MS/MS 2 0 1 1 42.993 37.845 2 0.035722 49247 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 63.076 22.807 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53027 2296 47602 445457 352204 352204 1 TQAILLEMVGDLPDADIKPPENVLFVCK Unmodified 3124.6188 0.61884465 3537 Q8WUA2 PPIL4 Peptidyl-prolyl cis-trans isomerase-like 4 yes yes 0 0 1 By MS/MS 2 0 1 1 100.19 92.055 3 2.0081E-06 118639 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.042 39.262 9095800 9095800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53028 3537 47603 445458 352205 352205 1 TQAIVCQQLDLTHLK Unmodified 1766.9349 0.93490391 1839 P61221 ABCE1 ATP-binding cassette sub-family E member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 78.548 73.804 3 1.6438E-23 92921 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.92 114.82 267380000 27168000 235290000 4922600 0 0 0 0 0 0 0 0 0 0 0 0 53029 1839 47604 445459;445460;445461;445462 352206;352207;352208;352209 352206 4 TQALEMNK Oxidation (M) 949.45388 0.45388123 2816 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 7.5779 7.6837 2 0.012287 5136 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.265 36.056 44092000 0 0 0 2918600 2306200 2869600 3803300 0 2914900 5958300 0 6713400 5999300 4867600 5740700 53030 2816 47605 445463;445464;445465;445466;445467;445468;445469;445470;445471;445472 352210;352211;352212;352213;352214;352215;352216 352212 4452 7 TQALEMNK Unmodified 933.45897 0.45896661 2816 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 0 0 0 By MS/MS 10 0 1 1 20.347 20.685 2 0.013062 21361 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 73.208 28.247 25225000 0 0 0 0 0 0 0 0 0 0 0 0 25225000 0 0 53031 2816 47605 445473 352217 352217 1 TQALGPLK Unmodified 826.49125 0.49125301 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 39.85 36.014 2 0.020846 39716 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 62.464 31.852 143070000 6741900 121130000 0 0 0 0 0 0 0 0 0 0 15196000 0 0 53032 5262 47606 445474;445475;445476 352218;352219 352219 2 TQANDYFK Unmodified 985.45051 0.45051041 1709 P53041 PPP5C Serine/threonine-protein phosphatase 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 31.33 30.227 2 0.015404 38586 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.992 76.225 913550000 19428000 807940000 4784200 0 1996700 0 3272600 5003800 3049600 0 14365000 11682000 0 9528000 32509000 53033 1709 47607 445477;445478;445479;445480;445481;445482;445483;445484;445485;445486;445487 352220;352221;352222;352223 352220 4 TQAPAVATT Unmodified 858.4447 0.44469675 1027 P15880 RPS2 40S ribosomal protein S2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 25.169 25.372 2 0.012915 27515 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 60.589 45.653 663810000 0 0 0 51344000 53248000 45206000 37561000 33447000 35673000 54597000 52276000 80351000 72244000 67072000 80795000 53034 1027 47608 445488;445489;445490;445491;445492;445493;445494;445495;445496;445497;445498;445499 352224;352225;352226;352227 352224 4 TQARPVGVK Unmodified 954.56106 0.56106391 661 O95433 AHSA1 Activator of 90 kDa heat shock protein ATPase homolog 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 11.461 8.3034 2 0.027474 12606 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 124.08 78.128 575940000 422640000 86456000 66840000 0 0 0 0 0 0 0 0 0 0 0 0 53035 661 47609 445500;445501;445502 352228;352229 352229 0 TQASSSFQDSSQPAGK Unmodified 1624.7329 0.73289286 1497 P46087 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 20.672 20.946 2 1.7718E-20 20684 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 112.43 103.43 42486000 0 0 0 0 2556500 0 2952400 0 2058500 4268900 5116800 6014600 7509300 6377500 5631800 53036 1497 47610 445503;445504;445505;445506;445507;445508;445509;445510;445511;445512 352230;352231;352232;352233;352234;352235;352236 352232 7 TQASSSPAALKPPAGR Unmodified 1537.8213 0.82125436 2867 Q6BDS2 UHRF1BP1 UHRF1-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 1 2 1 32.339 32.536 3 3.5594E-05 35778 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 73.707 68.816 176280000 0 0 0 12412000 11311000 11538000 13303000 15201000 10560000 13650000 18234000 22923000 20051000 13240000 13858000 53037 2867 47611 445513;445514;445515;445516;445517;445518;445519;445520;445521;445522;445523;445524;445525 352237;352238;352239;352240;352241;352242;352243;352244;352245;352246;352247;352248;352249;352250 352243 10 TQAYQDQK Unmodified 980.45632 0.45632407 1380 P36871 PGM1 Phosphoglucomutase-1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 6.4096 3.0733 2 0.03245 5038 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.184 34.886 41861000 17810000 24050000 0 0 0 0 0 0 0 0 0 0 0 0 0 53038 1380 47612 445526;445527 352251;352252;352253 352251 3 TQAYQDQKPGTSGLR Unmodified 1648.8169 0.81689726 1380 P36871 PGM1 Phosphoglucomutase-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 24.187 24.575 3 0.00032271 24962 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.899 36.983 110650000 0 0 0 0 0 0 3709700 0 0 2878400 18084000 16848000 0 15430000 53698000 53039 1380 47613 445528;445529;445530;445531;445532;445533 352254;352255;352256;352257;352258 352254 5 TQAYQDQKPGTSGLRK Unmodified 1776.9119 0.91186028 1380 P36871 PGM1 Phosphoglucomutase-1 yes yes 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 22.539 18.65 3 0.0041918 26423 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.716 65.716 219070000 212980000 0 6089900 0 0 0 0 0 0 0 0 0 0 0 0 53040 1380 47614 445534;445535 352259;352260 352259 2 TQDALQQRPSVLHNTGMK Unmodified 2023.0269 0.026906813 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 2 2 2 2 2 1 2 1 1 2 42.486 42.637 3;4 1.1872E-05 46575 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.779 57.956 199960000 0 0 0 11026000 7826100 13039000 9187200 17424000 12975000 15110000 18277000 23514000 12052000 14905000 44622000 53041 5262 47615 445536;445537;445538;445539;445540;445541;445542;445543;445544;445545;445546;445547;445548;445549;445550;445551;445552;445553;445554;445555;445556 352261;352262;352263;352264;352265;352266;352267;352268;352269;352270;352271 352266 9 TQDECILHFLR Unmodified 1430.6976 0.69763375 3687;3475 Q8TAQ2;Q92922 SMARCC2;SMARCC1 SWI/SNF complex subunit SMARCC2;SWI/SNF complex subunit SMARCC1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 78.41 78.514 3 0.00034974 90572 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 69.979 61.25 150810000 0 0 0 0 2516200 14446000 3759800 9301500 10770000 12535000 6150700 12755000 10565000 10565000 57443000 53042 3475;3687 47616 445557;445558;445559;445560;445561;445562;445563;445564;445565;445566;445567 352272;352273;352274;352275;352276;352277;352278;352279;352280;352281 352272 10 TQDIAVISAK Unmodified 1044.5815 0.58152458 2005 P83436 COG7 Conserved oligomeric Golgi complex subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 43.458 43.717 2 0.0054527 49631 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 68.893 30.101 96608000 0 0 0 0 4902300 12405000 8959900 0 0 12310000 10051000 13444000 10013000 7832700 16691000 53043 2005 47617 445568;445569;445570;445571;445572;445573;445574;445575;445576 352282;352283;352284;352285;352286;352287;352288;352289 352289 8 TQDNRNNNSQQDIDSENMK Unmodified 2249.9567 0.95671458 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 17.509 17.697 3 6.657E-06 17237 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 68.567 66.17 56064000 0 0 0 4948300 2693800 3414300 4517100 5283400 2896500 4163400 3543000 8183600 4460500 3556900 8403300 53044 3443 47618 445577;445578;445579;445580;445581;445582;445583;445584;445585;445586;445587;445588 352290;352291;352292;352293;352294;352295;352296;352297 352297 8 TQDNRNNNSQQDIDSENMK Oxidation (M) 2265.9516 0.9516292 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 1 1 By MS/MS By MS/MS 5 3.56 1 1 1 2 1 9.9477 7.8505 3 4.7883E-06 6036 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 66.152 62.814 12780000 0 7566700 0 0 0 0 0 0 0 0 5213400 0 0 0 0 53045 3443 47618 445589;445590;445591 352298;352299 352299 4987 2 TQDPSSPGTTPPQAR Unmodified 1538.7325 0.73249893 2235 Q13112 CHAF1B Chromatin assembly factor 1 subunit B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.275 23.48 2 2.5908E-14 24562 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 100.93 85.959 88393000 0 0 0 4784100 5637300 5116800 5447200 4999300 3726900 6285600 9357200 10534000 6858100 8927600 16718000 53046 2235 47619 445592;445593;445594;445595;445596;445597;445598;445599;445600;445601;445602;445603 352300;352301;352302;352303;352304;352305;352306;352307;352308;352309;352310;352311 352308 12 TQDQISNIK Unmodified 1045.5404 0.54038805 2452 Q14847 LASP1 LIM and SH3 domain protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.48 1 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 28.929 28.694 2 2.3242E-05 23872 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 147.19 104.06 885930000 30320000 423000000 5285800 9238800 7501400 8223100 9373300 7247900 4173900 9992600 75375000 70054000 13470000 63447000 149230000 53047 2452 47620 445604;445605;445606;445607;445608;445609;445610;445611;445612;445613;445614;445615;445616;445617;445618;445619 352312;352313;352314;352315;352316;352317;352318;352319;352320;352321;352322;352323 352318 8 TQEDEEEISTSPGVSEFVSDAFDACNLNQEDLRK Unmodified 3858.7014 0.7014009 3732 Q96A49 SYAP1 Synapse-associated protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 93.566 85.436 3 1.3856E-132 110683 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 142.68 141.14 27058000 27058000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53048 3732 47621 445620 352324;352325 352325 2 TQEDTSSPLSAAGQPENMDSQQLVSLVQK Oxidation (M) 3103.4616 0.46155197 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 80.533 80.673 3 8.1566E-21 93025 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.733 55.105 68495000 0 0 0 0 0 10016000 0 8429900 0 13689000 8046100 12097000 0 8263400 7953900 53049 5189 47622 445621;445622;445623;445624;445625;445626;445627 352326;352327;352328;352329;352330;352331;352332;352333 352328 6587 8 TQEEGEERAESEQEAYLRED Unmodified 2397.0204 0.020420269 4587 Q9NR28 DIABLO Diablo homolog, mitochondrial yes yes 0 0 2 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 46.87 41.172 3 6.9712E-05 54190 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.784 62.593 24946000 5737800 14306000 4902700 0 0 0 0 0 0 0 0 0 0 0 0 53050 4587 47623 445628;445629;445630 352334;352335 352334 1 TQEEIVAK Unmodified 916.48656 0.48656157 982 P13667 PDIA4 Protein disulfide-isomerase A4 yes yes 0 0 0 By MS/MS 10 0 1 1 16.382 16.652 2 0.042495 15451 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 84.568 41.444 22431000 0 0 0 0 0 0 0 0 0 0 0 0 0 22431000 0 53051 982 47624 445631 352336 352336 0 TQEELTPFFK Unmodified 1238.6183 0.61830402 82 CON__P81644 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.331 76.389 2 0.0016808 87492 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 103.55 83.76 + 386010000 0 0 0 17648000 20741000 21556000 30319000 36750000 24557000 30773000 46941000 39428000 34854000 30660000 51782000 53052 82 47625 445632;445633;445634;445635;445636;445637;445638;445639;445640;445641;445642;445643 352337;352338;352339;352340;352341;352342;352343;352344;352345;352346;352347 352339 10 TQEEVAALK Unmodified 987.52368 0.52367535 3217 Q8IUD2 ERC1 ELKS/Rab6-interacting/CAST family member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 28.807 28.339 2 0.0082493 35742 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.657 48.548 144200000 0 52597000 0 4327800 4009600 6413300 6234700 5947600 4511100 7784900 11654000 8996900 7420400 8548500 15751000 53053 3217 47626 445644;445645;445646;445647;445648;445649;445650;445651;445652;445653;445654;445655;445656;445657 352348;352349;352350;352351 352350 4 TQEGSAIDMTPIEADFSWQK Unmodified 2253.026 0.025963339 2830 Q5VZ89 DENND4C DENN domain-containing protein 4C yes yes 0 0 0 By MS/MS 2 0 2 2 92.248 87.337 2 2.7123E-54 108547 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 150.57 138.41 14957000 0 14957000 0 0 0 0 0 0 0 0 0 0 0 0 0 53054 2830 47627 445658;445659 352352;352353 352352 1 TQEGSLSAR Unmodified 947.46722 0.46722311 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 10.463 10.604 2 0.0037823 9650 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 88.948 52.378 424030000 0 0 0 27419000 19672000 34161000 34823000 22110000 21883000 30109000 35677000 50961000 40447000 45844000 60922000 53055 1986 47628 445660;445661;445662;445663;445664;445665;445666;445667;445668;445669;445670;445671 352354;352355;352356;352357;352358;352359;352360 352354 6 TQEHFTHNTVR Unmodified 1368.6535 0.65346075 2151 Q08209 PPP3CA Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 10.846 10.953 3 0.0051052 8705 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 52.555 44.042 41255000 0 0 0 5491500 1574800 3467800 3034500 2228700 1618700 3630700 0 6880000 0 3788300 9540600 53056 2151 47629 445672;445673;445674;445675;445676;445677;445678;445679;445680;445681 352361 352361 1 TQEIQENLLSLEETMK Oxidation (M) 1920.935 0.93502307 3679 Q92888 ARHGEF1 Rho guanine nucleotide exchange factor 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS 10 0 11 1 2 1 1 1 1 2 1 1 78.597 78.65 2;3 6.8755E-19 90645 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 109.44 90.198 50414000 0 0 0 0 3940600 14241000 0 5792600 5459300 8365000 0 9877300 2737500 0 0 53057 3679 47630 445682;445683;445684;445685;445686;445687;445688;445689;445690;445691;445692 352362;352363;352364;352365;352366;352367;352368 352365 5230 7 TQEIQENLLSLEETMK Unmodified 1904.9401 0.94010844 3679 Q92888 ARHGEF1 Rho guanine nucleotide exchange factor 1 yes yes 0 0 0 By MS/MS 10 0 1 1 86.494 86.653 2 8.3202E-05 100235 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.401 78.459 7011700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7011700 53058 3679 47630 445693 352369 352369 1 TQELAFATHQDPADPK Unmodified 1767.8428 0.84277766 3933 Q96N67 DOCK7 Dedicator of cytokinesis protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 49.087 48.787 2;3 4.4738E-40 63916 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 183.7 159.41 248690000 0 24406000 0 12527000 9544000 18881000 15692000 13552000 20802000 20366000 21209000 30327000 20840000 13696000 26850000 53059 3933 47631 445694;445695;445696;445697;445698;445699;445700;445701;445702;445703;445704;445705;445706 352370;352371;352372;352373;352374 352370 5 TQELETTQK Unmodified 1076.535 0.53496832 1695 P52732 KIF11 Kinesin-like protein KIF11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 11.458 11.285 2 0.0032668 10505 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 93.143 76.047 51960000 6302300 0 0 2865000 2067700 4129000 2983300 2662400 2296200 4648200 3395600 6029100 4331800 3671200 6577900 53060 1695 47632 445707;445708;445709;445710;445711;445712;445713;445714;445715;445716;445717;445718;445719 352375;352376;352377;352378;352379;352380;352381;352382;352383;352384;352385;352386 352376 12 TQELREPVLSAAIATK Unmodified 1725.9625 0.96249887 5083 Q9Y259 CHKB Choline/ethanolamine kinase yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 74.627 69.019 3 0.00036572 90173 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.805 59.147 34432000 27715000 0 6717400 0 0 0 0 0 0 0 0 0 0 0 0 53061 5083 47633 445720;445721 352387;352388 352387 2 TQENYRGGLQSQSGTVVTTEIK Unmodified 2395.1979 0.19793112 4004 Q99081 TCF12 Transcription factor 12 yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS 8.4 3.2 1 4 1 1 1 1 1 54.854 54.405 3 0.00015144 60909 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.187 25.383 22010000 0 0 3373100 0 0 2723900 0 0 0 0 0 4997300 0 2217000 8698600 53062 4004 47634 445722;445723;445724;445725;445726 352389;352390;352391 352390 3 TQEPAGSLEENNSDK Unmodified 1617.7118 0.71182307 4752 Q9NYV4 CDK12 Cyclin-dependent kinase 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.948 23.154 2 6.531E-27 23147 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 131.43 121.06 150780000 0 0 0 8124700 7627100 6415800 10320000 8026700 7068300 17438000 10295000 16197000 17839000 19999000 21427000 53063 4752 47635 445727;445728;445729;445730;445731;445732;445733;445734;445735;445736;445737;445738 352392;352393;352394;352395;352396;352397;352398;352399;352400;352401;352402;352403;352404 352396 13 TQEPFSVR Unmodified 962.48214 0.48214489 450 O60942 RNGTT mRNA-capping enzyme;Polynucleotide 5'-triphosphatase;mRNA guanylyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.558 39.737 2 0.008982 43390 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 84.368 67.441 244600000 0 0 0 13723000 11685000 15822000 22215000 18521000 16783000 21256000 24697000 26826000 21654000 19371000 32043000 53064 450 47636 445739;445740;445741;445742;445743;445744;445745;445746;445747;445748;445749;445750 352405;352406;352407;352408;352409;352410;352411;352412 352411 8 TQEPPVDLSK Unmodified 1112.5714 0.57135383 1004 P14649 MYL6B Myosin light chain 6B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 39.068 39.28 2 0.0097229 42783 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.267 37.481 38713000 0 0 0 0 4613100 3654200 0 0 0 0 9874700 11214000 0 9357300 0 53065 1004 47637 445751;445752;445753;445754;445755 352413;352414 352413 2 TQEQDEEVGLGTEEDPSLPALLTQPR Unmodified 2851.3723 0.37232625 671 O95602 POLR1A DNA-directed RNA polymerase I subunit RPA1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 87.941 88.096 3 7.2778E-05 102243 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 24.459 21.81 8270700 0 0 0 0 0 0 0 0 0 2457000 2479900 0 0 0 3333800 53066 671 47638 445756;445757;445758 352415;352416;352417;352418;352419 352419 5 TQEQLALEMAELTAR Unmodified 1702.856 0.85598488 1198 P26038 MSN Moesin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 2 2 2 2 86.347 86.497 2;3 2.5658E-97 100083 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 229.97 205.11 99247000 0 0 0 0 0 0 0 0 0 0 11183000 11704000 0 7806700 68553000 53067 1198 47639 445759;445760;445761;445762;445763;445764;445765;445766 352420;352421;352422;352423;352424;352425;352426;352427;352428;352429;352430 352421 10 TQEQLALEMAELTAR Oxidation (M) 1718.8509 0.85089951 1198 P26038 MSN Moesin yes yes 0 1 0 By MS/MS By matching By matching By MS/MS 10 0 5 1 2 1 1 71.289 71.594 2;3 0.0012837 82553 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 43.297 32.242 32300000 0 0 0 0 0 0 0 0 0 0 5930400 10771000 0 3232100 12367000 53068 1198 47639 445767;445768;445769;445770;445771 352431;352432 352432 1743 1 TQEREQIMVLNNK Oxidation (M) 1617.8145 0.81445442 103 CON__Q7Z794;Q7Z794 KRT77 Keratin, type II cytoskeletal 1b yes no 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 2 1 1 1 1 2 1 1 1 34.357 34.436 2;3 0.00015987 37935 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 79.492 67.878 + 182100000 0 0 0 55270000 8327200 0 16691000 12508000 8473300 27893000 12956000 38644000 0 1335200 0 53069 103 47640 445772;445773;445774;445775;445776;445777;445778;445779;445780;445781;445782 352433;352434;352435;352436;352437;352438;352439;352440;352441;352442 352435 137 10 TQEREQIMVLNNK Unmodified 1601.8195 0.8195398 103 CON__Q7Z794;Q7Z794 KRT77 Keratin, type II cytoskeletal 1b yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 2 1 1 2 1 43.188 43.313 2;3 1.334E-19 49135 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 151.66 132.61 + 189140000 0 0 0 89861000 0 0 13366000 0 0 0 0 76704000 0 9211200 0 53070 103 47640 445783;445784;445785;445786;445787;445788;445789 352443;352444;352445;352446;352447;352448;352449;352450 352448 8 TQETLSQAGQK Unmodified 1189.5939 0.59388018 325 O43399 TPD52L2 Tumor protein D54 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.94 3.58 1 3 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19.734 19.575 2 2.157E-29 12983 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 177.91 129.88 1786300000 80317000 45555000 2726600 74538000 91427000 78091000 84261000 116870000 92975000 152910000 173190000 223280000 170570000 140730000 258910000 53071 325 47641 445790;445791;445792;445793;445794;445795;445796;445797;445798;445799;445800;445801;445802;445803;445804;445805 352451;352452;352453;352454;352455;352456;352457;352458;352459;352460;352461;352462;352463;352464;352465;352466 352452 15 TQETPSAQMEGFLNRK Unmodified 1835.8836 0.88359662 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.786 65.872 3 4.5365E-08 75425 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 78.285 66.846 147790000 0 0 0 3791500 3921600 14486000 7639300 8645600 4990200 12719000 12631000 14002000 10043000 15179000 39739000 53072 2047 47642 445806;445807;445808;445809;445810;445811;445812;445813;445814;445815;445816;445817 352467;352468;352469;352470;352471;352472;352473;352474;352475;352476;352477 352467 10 TQETQEIR Unmodified 1003.4934 0.49343786 100 CON__Q7RTT2;CON__Q8N1N4-2;Q8N1N4 KRT78 Keratin, type II cytoskeletal 78 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 2 2 1 1 2 2 1 2 1 1 1 10.354 10.478 2 0.0021765 9766 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 172.15 99.107 + 357320000 0 0 0 79080000 17994000 21808000 20628000 54273000 12149000 23988000 24497000 51038000 28582000 12169000 11111000 53073 100 47643 445818;445819;445820;445821;445822;445823;445824;445825;445826;445827;445828;445829;445830;445831;445832;445833;445834 352478;352479;352480;352481;352482;352483;352484;352485;352486;352487;352488;352489 352484 6 TQETVQRILLEPYK Unmodified 1716.941 0.94103514 685 O95749 GGPS1 Geranylgeranyl pyrophosphate synthase yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 77.869 72.422 2;3 0.005277 93976 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.565 62.893 25007000 9358800 0 15648000 0 0 0 0 0 0 0 0 0 0 0 0 53074 685 47644 445835;445836 352490;352491 352490 1 TQFDEGRVDGR Unmodified 1278.5953 0.59527717 3180 Q86W92 PPFIBP1 Liprin-beta-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 23.94 24.145 2;3 0.00021675 25162 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 89.266 66.148 959250000 0 0 0 54556000 49995000 57013000 73036000 74420000 65810000 87502000 87843000 117390000 95008000 70543000 126130000 53075 3180 47645 445837;445838;445839;445840;445841;445842;445843;445844;445845;445846;445847;445848;445849;445850;445851;445852;445853;445854;445855;445856;445857;445858;445859;445860 352492;352493;352494;352495;352496;352497;352498;352499;352500;352501;352502;352503;352504 352493 5 TQFLTTPISQAQK Unmodified 1461.7827 0.78274359 3915 Q96L91 EP400 E1A-binding protein p400 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 64.553 64.568 2 0.00086786 73921 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 69.01 51.574 82017000 0 0 0 7311800 7839400 9042600 8485300 9000800 0 0 11308000 0 11644000 0 17385000 53076 3915 47646 445861;445862;445863;445864;445865;445866;445867;445868;445869;445870;445871 352505;352506;352507;352508;352509;352510;352511;352512;352513;352514;352515 352505 11 TQFVSPWK Unmodified 991.51272 0.51271674 128 O00203 AP3B1 AP-3 complex subunit beta-1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 61.282 61.377 2 0.037548 70050 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 51.346 33.96 60139000 0 0 0 2128500 2495600 7759900 2821400 0 4898900 8485000 5886300 5196300 4413900 4712200 11341000 53077 128 47647 445872;445873;445874;445875;445876;445877;445878;445879;445880;445881;445882 352516;352517;352518 352517 3 TQGFLALFSGDTGEIK Unmodified 1682.8516 0.85155143 5077 Q9Y230 RUVBL2 RuvB-like 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 92.444 92.518 2 8.2582E-15 107449 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 123.28 102.28 144500000 0 0 0 1891100 3621300 8251200 4055000 8068800 7091700 27307000 14434000 11825000 3811400 9384200 44761000 53078 5077 47648 445883;445884;445885;445886;445887;445888;445889;445890;445891;445892;445893;445894 352519;352520;352521;352522;352523;352524;352525;352526;352527;352528;352529;352530;352531;352532;352533;352534 352520 16 TQGIIPLAPISK Unmodified 1236.7442 0.74417324 4672 Q9NVM9 ASUN Protein asunder homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.915 78.973 2 0.0041351 90353 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 68.069 60.848 73856000 0 0 0 2671900 3257700 5489400 4391000 4394000 4099500 7243600 7924300 7470600 6773500 6111500 14029000 53079 4672 47649 445895;445896;445897;445898;445899;445900;445901;445902;445903;445904;445905;445906 352535;352536;352537;352538;352539;352540;352541;352542;352543;352544;352545 352542 11 TQGQQVSSLK Unmodified 1074.5669 0.56693715 3835 Q96F86 EDC3 Enhancer of mRNA-decapping protein 3 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 18.783 15.183 2 0.013251 19646 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.929 41.78 20147000 0 20147000 0 0 0 0 0 0 0 0 0 0 0 0 0 53080 3835 47650 445907;445908 352546 352546 1 TQGVPAVLK Unmodified 911.54402 0.54401687 1663 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 45.593 45.852 2 0.0052466 51527 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 79.059 50.636 426550000 0 0 0 28037000 0 0 40132000 0 35846000 43205000 42669000 55183000 58923000 44508000 78051000 53081 1663 47651 445909;445910;445911;445912;445913;445914;445915;445916;445917 352547;352548;352549;352550;352551;352552;352553;352554;352555 352547 9 TQGYLESPK Unmodified 1021.508 0.50802529 1055 P17544 ATF7 Cyclic AMP-dependent transcription factor ATF-7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.017 27.214 2 0.0032581 29243 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 90.64 51.804 160880000 0 0 0 11797000 9443700 9948900 11526000 10572000 10293000 15718000 16157000 16255000 13488000 17143000 18539000 53082 1055 47652 445918;445919;445920;445921;445922;445923;445924;445925;445926;445927;445928;445929 352556;352557;352558;352559;352560;352561;352562;352563;352564 352563 9 TQHEEFVTSLAQQQQQQQQQQQQLQMPQMEAEVK Unmodified 4081.9222 0.92219033 3249 Q8IWX8 CHERP Calcium homeostasis endoplasmic reticulum protein yes yes 0 0 0 By MS/MS 2 0 1 1 80.638 78.11 4 0.0018577 94857 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 26.898 23.999 3821300 0 0 3821300 0 0 0 0 0 0 0 0 0 0 0 0 53083 3249 47653 445930 352565 352565 1 TQHEILRQVNEMK Unmodified 1624.8355 0.83552421 1563 P49257 LMAN1 Protein ERGIC-53 yes yes 0 0 1 By MS/MS 2 0 1 1 49.398 41.572 3 0.039271 57678 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 39.73 13.198 15540000 15540000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53084 1563 47654 445931 352566 352566 1 TQHELDHNGLVPLPVK Unmodified 1795.9581 0.95808219 3962 Q96QT6 PHF12 PHD finger protein 12 yes yes 0 0 0 By MS/MS 2 0 1 1 75.907 67.776 4 0.0067865 89394 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 31.089 24.108 9686800 9686800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53085 3962 47655 445932 352567 352567 1 TQHESELEQLR Unmodified 1368.6634 0.66335673 672 O95613 PCNT Pericentrin yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 32.163 32.527 3 0.050439 34675 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 31.068 21.381 25928000 0 0 0 0 0 0 2125300 1507600 0 3289400 2981900 5097600 2411800 2768000 5746100 53086 672 47656 445933;445934;445935;445936;445937;445938;445939;445940 352568 352568 1 TQHIQQPR Unmodified 1006.5308 0.53082642 1651 P51397 DAP Death-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 7.2419 7.4792 2 0.012173 4742 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.243 61.086 22584000 0 0 0 0 0 0 0 0 0 0 0 6234600 0 2711600 13638000 53087 1651 47657 445941;445942;445943 352569 352569 1 TQHLEGTGTFTTR Unmodified 1447.7056 0.7055559 4288 Q9C0D5 TANC1 Protein TANC1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 32.189 32.45 3 0.001425 34587 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.823 40.772 95159000 0 0 0 6485600 0 7366100 0 7863400 6246700 6390500 9229700 17345000 10728000 7193400 16310000 53088 4288 47658 445944;445945;445946;445947;445948;445949;445950;445951;445952;445953 352570;352571;352572;352573;352574;352575;352576 352576 7 TQHLQELFSR Unmodified 1257.6466 0.64658446 4902 Q9UHI6 DDX20 Probable ATP-dependent RNA helicase DDX20 yes yes 0 0 0 By MS/MS 10 0 1 1 51.23 51.925 3 0.019837 57949 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.48 22.514 8428500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8428500 53089 4902 47659 445954 352577 352577 1 TQHPTDANATSSR Unmodified 1384.6331 0.63311924 3205 Q86Y91 KIF18B Kinesin-like protein KIF18B yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 6.0631 6.2007 3 0.0046684 4391 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 34.444 24.656 23281000 0 0 0 2113000 2005100 0 0 1275500 1855500 1722300 3513800 3165200 2153900 2061700 3415100 53090 3205 47660 445955;445956;445957;445958;445959;445960;445961;445962;445963;445964 352578;352579;352580;352581 352578 4 TQIALEPEQILR Unmodified 1409.7878 0.78782897 2601 Q16342 PDCD2 Programmed cell death protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.442 80.547 2 0.003422 92950 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 60.434 42.625 66456000 0 0 0 0 2767200 4539700 4076700 3978700 3418000 7224700 7694500 8883200 5210600 5386000 13277000 53091 2601 47661 445965;445966;445967;445968;445969;445970;445971;445972;445973;445974;445975;445976 352582;352583;352584;352585;352586;352587;352588;352589;352590;352591;352592;352593 352584 12 TQIAPGSQTVLGIGPGPADLIDK Unmodified 2247.2111 0.21106199 5165 Q9Y3E5 PTRH2 Peptidyl-tRNA hydrolase 2, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 87.371 87.43 3 5.7537E-07 101417 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 51.834 43.015 15109000 0 0 0 0 2709200 1525400 0 2265600 0 3148200 0 0 0 0 5460200 53092 5165 47662 445977;445978;445979;445980;445981 352594;352595;352596 352594 2 TQIDHYVGIAR Unmodified 1271.6622 0.66223452 626 O95197 RTN3 Reticulon-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 2 1 2 2 47.219 47.377 2;3 0.0068754 54334 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 64.297 41.557 394270000 0 0 0 23515000 26717000 28167000 30331000 29599000 21175000 41686000 38005000 49549000 30282000 24649000 50594000 53093 626 47663 445982;445983;445984;445985;445986;445987;445988;445989;445990;445991;445992;445993;445994;445995;445996;445997;445998;445999;446000;446001;446002;446003;446004 352597;352598;352599;352600;352601;352602;352603;352604;352605;352606;352607;352608;352609 352609 7 TQIDHYVGIARDQTK Unmodified 1743.8904 0.89039656 626 O95197 RTN3 Reticulon-3 yes yes 0 0 1 By MS/MS By matching 2 0 3 2 1 54.182 47.444 3;4 0.004774 64816 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.548 39.634 69693000 67159000 0 2534100 0 0 0 0 0 0 0 0 0 0 0 0 53094 626 47664 446005;446006;446007 352610;352611 352610 2 TQIHFDPEVVQIK Unmodified 1552.8249 0.82494275 4618 Q9NS73 MBIP MAP3K12-binding inhibitory protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76.019 75.545 3 0.00020899 87036 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 71.513 65.257 133880000 0 16640000 9630300 4464400 8477800 15247000 2853200 6601700 5803200 12127000 12546000 18139000 4843800 5263500 11242000 53095 4618 47665 446008;446009;446010;446011;446012;446013;446014;446015;446016;446017;446018;446019;446020;446021 352612;352613;352614;352615;352616;352617;352618;352619 352619 7 TQILAASYELHK Unmodified 1372.7351 0.73506511 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 55.884 56.078 3 0.027066 63512 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 47.189 35.976 87032000 0 0 0 3603600 0 6809300 0 5802300 4467000 8407000 11063000 12478000 6419600 8537600 19445000 53096 2047 47666 446022;446023;446024;446025;446026;446027;446028;446029;446030;446031 352620 352620 0 TQILSPNTQDVLIFK Unmodified 1715.9458 0.94578617 2052 Q01415 GALK2 N-acetylgalactosamine kinase yes yes 0 0 0 By MS/MS 10 0 1 1 85.839 86.007 2 0.020655 99442 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.995 17.788 3631400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3631400 53097 2052 47667 446032 352621 352621 1 TQIQSQESDLK Unmodified 1275.6307 0.63065962 4836 Q9UBC2 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 24.387 24.617 2 0.00063756 25044 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.584 62.111 45862000 0 0 0 6386800 7777800 0 0 4740000 3212300 0 4898700 8131000 0 0 10715000 53098 4836 47668 446033;446034;446035;446036;446037;446038;446039 352622;352623;352624;352625 352622 4 TQIQSVEPYTK Unmodified 1292.6612 0.66123147 1419 P40763 STAT3 Signal transducer and activator of transcription 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41.965 41.203 2 3.0148E-05 52050 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 132.78 76.345 506690000 11739000 254140000 0 14756000 8973000 26809000 14584000 14039000 13256000 26532000 20800000 27046000 23129000 16979000 33904000 53099 1419 47669 446040;446041;446042;446043;446044;446045;446046;446047;446048;446049;446050;446051;446052;446053 352626;352627;352628;352629;352630;352631;352632;352633;352634;352635;352636;352637 352629 12 TQLASLPQIIEEEK Unmodified 1597.8563 0.85630246 1654 P51530 DNA2 DNA replication ATP-dependent helicase/nuclease DNA2;DNA replication nuclease DNA2;DNA replication ATP-dependent helicase DNA2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 90.168 83.682 2 0.0039625 103912 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 63.611 32.425 62573000 19364000 43209000 0 0 0 0 0 0 0 0 0 0 0 0 0 53100 1654 47670 446054;446055 352638 352638 1 TQLATLTSSLATVTQEK Unmodified 1790.9626 0.96255845 3780 Q96CN9 GCC1 GRIP and coiled-coil domain-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 88.12 83.278 3 0.0013099 103538 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 37.431 26.386 25540000 0 25540000 0 0 0 0 0 0 0 0 0 0 0 0 0 53101 3780 47671 446056 352639 352639 1 TQLAVCQQR Unmodified 1102.5553 0.55532661 2080 Q02790 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.422 24.626 2 0.0031874 25681 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 133.12 92.087 309140000 0 0 0 12341000 13823000 20728000 16696000 14428000 13683000 20345000 26588000 39619000 21419000 34051000 75418000 53102 2080 47672 446057;446058;446059;446060;446061;446062;446063;446064;446065;446066;446067;446068 352640;352641;352642;352643;352644;352645;352646;352647;352648;352649;352650;352651;352652;352653 352646 14 TQLDEARGLLLATK Unmodified 1527.8621 0.86205654 463 O75150 RNF40 E3 ubiquitin-protein ligase BRE1B yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 79.327 73.923 3 0.026563 91329 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 36.445 22.766 99366000 83607000 0 15759000 0 0 0 0 0 0 0 0 0 0 0 0 53103 463 47673 446069;446070 352654;352655 352655 2 TQLEELEDELQATEDAK Unmodified 1960.9113 0.91131074 1356;1357;1366 P35579;P35580;P35749 MYH9;MYH10;MYH11 Myosin-9;Myosin-10;Myosin-11 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.24 3.19 4 4 26 1 5 2 2 2 3 2 3 2 2 2 2 2 2 2 85.327 84.508 2;3 1.1437E-282 97755 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 245.03 239.88 2692300000 1523000 1567200000 45548000 16024000 70340000 78817000 33437000 76869000 68482000 178230000 120590000 135000000 24253000 59653000 216380000 53104 1356;1357;1366 47674 446071;446072;446073;446074;446075;446076;446077;446078;446079;446080;446081;446082;446083;446084;446085;446086;446087;446088;446089;446090;446091;446092;446093;446094;446095;446096;446097;446098;446099;446100;446101;446102;446103;446104 352656;352657;352658;352659;352660;352661;352662;352663;352664;352665;352666;352667;352668;352669;352670;352671;352672;352673;352674;352675;352676;352677;352678;352679;352680;352681;352682;352683;352684;352685;352686;352687;352688;352689;352690;352691;352692;352693;352694;352695 352668 40 TQLEINGR Unmodified 929.49304 0.49304393 2832;4594;4646 Q5VZF2;Q9NR56;Q9NUK0 MBNL2;MBNL1;MBNL3 Muscleblind-like protein 2;Muscleblind-like protein 1;Muscleblind-like protein 3 no no 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 28.368 28.644 2 1.3418E-11 29840 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 191.63 117.19 335510000 0 0 0 0 0 0 0 127430000 0 0 0 0 121620000 86461000 0 53105 2832;4594;4646 47675 446105;446106;446107 352696;352697 352696 0 TQLEINGRNNLIQQK Unmodified 1767.9591 0.95914482 2832;4594;4646 Q5VZF2;Q9NR56;Q9NUK0 MBNL2;MBNL1;MBNL3 Muscleblind-like protein 2;Muscleblind-like protein 1;Muscleblind-like protein 3 no no 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 59.888 53.103 2;3 1.9793E-15 71822 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 119.39 87.544 84240000 80013000 0 4226700 0 0 0 0 0 0 0 0 0 0 0 0 53106 2832;4594;4646 47676 446108;446109;446110 352698;352699 352699 2 TQLEQLPEHIK Unmodified 1334.7194 0.71941505 1999 P82664 MRPS10 28S ribosomal protein S10, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 55.992 51.132 3 0.018555 66346 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 44.426 21.47 46055000 0 38693000 7361700 0 0 0 0 0 0 0 0 0 0 0 0 53107 1999 47677 446111;446112 352700 352700 1 TQLEQLYQWAQVK Unmodified 1633.8464 0.84640648 1541 P48507 GCLM Glutamate--cysteine ligase regulatory subunit yes yes 0 0 0 By MS/MS 2 0 1 1 90.422 85.526 3 0.00069136 106283 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.964 59.906 19864000 0 19864000 0 0 0 0 0 0 0 0 0 0 0 0 0 53108 1541 47678 446113 352701 352701 1 TQLGEDHEK Unmodified 1055.4884 0.48835248 465 O75153 CLUH Clustered mitochondria protein homolog yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 6.9014 4.1711 2 0.0073568 6217 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 93.162 70.12 351080000 0 341570000 9513600 0 0 0 0 0 0 0 0 0 0 0 0 53109 465 47679 446114;446115 352702 352702 1 TQLHEERQDIQTDNSDIFQETK Unmodified 2674.2471 0.24706616 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.27 2.3 1 10 1 2 1 2 2 1 2 53.045 52.825 3;4 3.0176E-54 59729 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 115.55 108.76 108580000 0 0 2880000 0 0 33806000 6535200 19085000 26984000 4102000 0 0 0 15188000 0 53110 2556 47680 446116;446117;446118;446119;446120;446121;446122;446123;446124;446125;446126 352703;352704;352705;352706;352707;352708;352709 352703 7 TQLIAHDK Unmodified 924.50288 0.50288033 1864 P61962 DCAF7 DDB1- and CUL4-associated factor 7 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 12.071 11.747 2 0.033612 14456 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 114.5 90.974 188480000 0 61177000 81281000 2641200 4016700 5123300 6038200 4810600 4873200 3158400 709980 2507700 6385300 5758400 0 53111 1864 47681 446127;446128;446129;446130;446131;446132;446133;446134;446135;446136;446137;446138;446139 352710;352711 352711 1 TQLIFGSVTNIPAK Unmodified 1487.8348 0.83477916 4345 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.08 3.33 2 1 9 1 2 1 1 1 1 1 1 1 1 1 82.027 80.703 2 0.0010929 101707 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.34 56.45 136850000 27928000 15434000 0 4020500 6325000 11169000 7843400 8054300 0 13462000 0 13367000 0 10929000 18318000 53112 4345 47682 446140;446141;446142;446143;446144;446145;446146;446147;446148;446149;446150;446151 352712;352713;352714;352715 352714 4 TQLIQLSTLLR Unmodified 1284.7765 0.776536 3485 Q8TC07 TBC1D15 TBC1 domain family member 15 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 89.601 89.729 2 0.026912 103864 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.894 22.272 5281500 0 0 0 0 0 0 0 0 0 1602500 0 0 0 0 3679000 53113 3485 47683 446152;446153 352716 352716 1 TQLNLLLDK Unmodified 1056.6179 0.61791009 5014 Q9UM54 MYO6 Unconventional myosin-VI yes yes 0 0 0 By MS/MS 2 0 1 1 79.089 74.353 2 0.024121 92653 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.614 41.947 23494000 0 23494000 0 0 0 0 0 0 0 0 0 0 0 0 0 53114 5014 47684 446154 352717 352717 1 TQLNPTSLQK Unmodified 1128.6139 0.61388734 4795;1216 P27448;Q9P0L2 MARK3;MARK1 MAP/microtubule affinity-regulating kinase 3;Serine/threonine-protein kinase MARK1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 39.228 38.245 2 0.010972 42873 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 55.064 31.635 107910000 10133000 35996000 0 5460000 0 8291700 6938000 5008000 5470100 8214700 10055000 0 6580800 5765000 0 53115 1216;4795 47685 446155;446156;446157;446158;446159;446160;446161;446162;446163;446164;446165 352718;352719;352720;352721;352722;352723 352718 4 TQLNSSSLQK Unmodified 1104.5775 0.57750184 3040 Q7KZI7 MARK2 Serine/threonine-protein kinase MARK2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 22.837 22.719 2 0.037957 23934 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 65.305 41.877 41515000 0 10390000 0 2701300 0 2070800 2554100 2186600 1935000 3913600 3927500 2443100 3062900 2970100 3360100 53116 3040 47686 446166;446167;446168;446169;446170;446171;446172;446173;446174;446175;446176;446177 352724;352725 352724 1 TQLSPSIK Unmodified 872.49673 0.49673232 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 35.678 30.085 2 0.031365 39657 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.109 16.128 68675000 8910900 59764000 0 0 0 0 0 0 0 0 0 0 0 0 0 53117 3443 47687 446178;446179 352726 352726 1 TQLVLYENALK Unmodified 1290.7184 0.71835242 5260 Q9Y613 FHOD1 FH1/FH2 domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.469 74.532 2 0.0012784 85896 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 84.17 66.306 82143000 0 0 0 4700000 5276700 7891100 5309300 5807300 4383900 9741400 7637300 8205500 5691600 8666100 8832400 53118 5260 47688 446180;446181;446182;446183;446184;446185;446186;446187;446188;446189;446190;446191 352727;352728;352729;352730;352731;352732;352733;352734;352735;352736;352737;352738;352739;352740 352728 14 TQLVWLVR Unmodified 1013.6022 0.60220045 2860 Q68E01 INTS3 Integrator complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 80.909 80.992 2 0.032055 93250 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.549 37.256 28633000 0 0 0 2680000 0 3169700 1391200 2159700 2954800 3390700 2243400 0 1588400 2673700 6382000 53119 2860 47689 446192;446193;446194;446195;446196;446197;446198;446199;446200;446201 352741;352742 352742 2 TQLWASEPGTPPLPTSLPSQNPILK Unmodified 2671.4221 0.4221174 4230 Q9BXP5 SRRT Serrate RNA effector molecule homolog yes yes 0 0 0 By MS/MS 10 0 1 1 91.835 91.973 3 0.0038888 106540 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 24.397 18.17 1460200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1460200 53120 4230 47690 446202 352743 352743 1 TQLYEYLQNR Unmodified 1326.6568 0.65681479 5125 Q9Y2X3 NOP58 Nucleolar protein 58 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 66.622 66.796 2 0.010696 75962 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.549 40.399 35179000 0 0 0 0 2500300 0 3354500 4145600 0 5317900 3335200 5059900 2846900 3261200 5357700 53121 5125 47691 446203;446204;446205;446206;446207;446208;446209;446210;446211 352744;352745;352746 352744 3 TQMELLQAGLSR Oxidation (M) 1361.6973 0.6972994 4814 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 2 1 1 1 1 57.782 57.678 2 8.6778E-05 65377 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 100.69 82.375 28185000 0 0 0 7555100 0 0 0 9313800 0 0 0 0 0 11316000 0 53122 4814 47692 446212;446213;446214;446215;446216;446217;446218;446219;446220;446221 352747;352748;352749;352750;352751;352752;352753;352754;352755;352756 352750 6180 10 TQMELLQAGLSR Unmodified 1345.7024 0.70238478 4814 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 73.831 73.95 2 0.0050826 85264 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.452 36.099 105690000 0 0 0 0 5923200 10375000 8981900 9349800 9731100 13149000 13371000 17232000 0 0 17577000 53123 4814 47692 446222;446223;446224;446225;446226;446227;446228;446229;446230 352757;352758;352759 352759 3 TQMEMLTK 2 Oxidation (M) 1012.4569 0.4569177 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 9.8663 10.028 2 0.010694 8502 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 53.968 35.237 36616000 0 0 0 2940500 0 2676500 2931800 2406400 2127700 3537700 3774300 5262800 4233500 2827500 3897700 53124 3676 47693 446231;446232;446233;446234;446235;446236;446237;446238;446239;446240;446241 352760;352761;352762;352763;352764;352765;352766;352767;352768;352769 352768 5215;5216 10 TQMEMLTK Unmodified 980.46709 0.46708845 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.865 38.046 2 0.012186 41998 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 75.213 37.654 196380000 0 0 0 8981300 10731000 12867000 11341000 16609000 7870300 20298000 24628000 18601000 18612000 15684000 30157000 53125 3676 47693 446242;446243;446244;446245;446246;446247;446248;446249;446250;446251;446252;446253 352770;352771;352772;352773;352774;352775 352770 4 TQMITINR Oxidation (M) 991.51206 0.51206481 3255 Q8IX12 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 2 1 2 2 1 2 2 2 2 2 2 28.656 28.911 2 0.015237 30020 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.59 42.554 215100000 0 0 0 0 13791000 6107000 22360000 14311000 5158500 21920000 24464000 25126000 25390000 25917000 30558000 53126 3255 47694 446254;446255;446256;446257;446258;446259;446260;446261;446262;446263;446264;446265;446266;446267;446268;446269;446270;446271;446272;446273 352776;352777;352778 352777 4869 3 TQMITINR Unmodified 975.51715 0.51715019 3255 Q8IX12 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 42.688 42.712 2 0.020431 46597 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 109.01 67.36 119460000 0 0 0 10664000 10766000 0 0 22455000 10317000 21481000 24217000 0 0 19564000 0 53127 3255 47694 446274;446275;446276;446277;446278;446279;446280 352779;352780 352780 1 TQMLDQEELLASTR Oxidation (M) 1649.7931 0.79305028 1328 P33176 KIF5B Kinesin-1 heavy chain yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 2 1 1 2 1 1 2 1 2 1 1 65.261 65.304 2 4.1619E-19 72650 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 130.01 117.43 77998000 0 0 0 8106900 4530300 0 5591900 8699100 3715700 9426700 15556000 5919700 12034000 4417400 0 53128 1328 47695 446281;446282;446283;446284;446285;446286;446287;446288;446289;446290;446291;446292;446293;446294;446295 352781;352782;352783;352784;352785;352786;352787;352788;352789;352790;352791;352792;352793;352794 352782 1981 12 TQMLDQEELLASTR Unmodified 1633.7981 0.79813565 1328 P33176 KIF5B Kinesin-1 heavy chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 73.364 73.734 2 0.0003566 84426 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.073 61.654 18460000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18460000 53129 1328 47695 446296;446297;446298 352795;352796;352797 352795 3 TQMLDQEELLASTRR Unmodified 1789.8992 0.89924668 1328 P33176 KIF5B Kinesin-1 heavy chain yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 66.925 66.873 3 0.00013669 75901 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 61.732 50.04 111920000 0 0 0 8052700 6918100 20214000 7625600 18200000 12460000 20328000 0 0 0 18126000 0 53130 1328 47696 446299;446300;446301;446302;446303;446304;446305;446306 352798;352799;352800;352801;352802;352803;352804;352805 352804 7 TQMLDQEELLASTRR Oxidation (M) 1805.8942 0.89416131 1328 P33176 KIF5B Kinesin-1 heavy chain yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 56.892 56.801 3 7.0443E-05 65160 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 67.358 50.29 88707000 0 0 0 19858000 19637000 0 0 16504000 12649000 0 20059000 0 0 0 0 53131 1328 47696 446307;446308;446309;446310;446311 352806;352807;352808;352809;352810 352809 1981 5 TQMNSFLLSTASQQEIATLDNK Oxidation (M) 2455.1901 0.19006855 3856 Q96GM5 SMARCD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 yes yes 0 1 0 By MS/MS 2 0 2 2 87.544 82.736 2;3 1.5263E-109 102902 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 185.02 177.82 72842000 0 72842000 0 0 0 0 0 0 0 0 0 0 0 0 0 53132 3856 47697 446312;446313 352811;352812 352812 5367 2 TQMNSFLLSTASQQEIATLDNK Unmodified 2439.1952 0.19515393 3856 Q96GM5 SMARCD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 yes yes 0 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 3 1 90.689 86.817 2;3 4.6872E-289 107845 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 322.99 303.24 175230000 0 173120000 2114300 0 0 0 0 0 0 0 0 0 0 0 0 53133 3856 47697 446314;446315;446316;446317 352813;352814;352815;352816 352813 4 TQMSILEQRESLPIYK Unmodified 1935.0135 0.013548159 2414 Q14562 DHX8 ATP-dependent RNA helicase DHX8 yes yes 0 0 1 By MS/MS 2 0 1 1 83.23 75.099 3 0.0085229 98214 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.297 34.251 13097000 13097000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53134 2414 47698 446318 352817 352817 1 TQMTSAVR Oxidation (M) 908.43857 0.43856552 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 5.9892 6.1105 2 0.03635 3809 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 45.081 24.526 63306000 0 0 0 4563300 4048200 6670100 6877500 7091100 5401900 4828400 4172900 0 5861300 4823200 8968200 53135 1986 47699 446319;446320;446321;446322;446323;446324;446325;446326;446327;446328;446329 352818 352818 3239 1 TQMTSAVR Unmodified 892.44365 0.44365089 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.82 14.99 2 0.015851 13663 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.214 35.285 176630000 0 0 0 9536500 8202400 8989000 10648000 12808000 5671800 14158000 16698000 13810000 18790000 20272000 37042000 53136 1986 47699 446330;446331;446332;446333;446334;446335;446336;446337;446338;446339;446340;446341 352819;352820;352821;352822;352823 352820 4 TQMTSAVREPK Oxidation (M) 1262.6289 0.62888548 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS 3.33 2.98 5 1 3 1 1 1 12.493 9.5621 2;3 3.9254E-05 14611 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 112.83 95.398 266160000 181680000 41170000 38233000 0 0 5070800 0 0 0 0 0 0 0 0 0 53137 1986 47700 446342;446343;446344;446345;446346;446347 352824;352825;352826;352827;352828;352829 352828 3239 4 TQMTSAVREPK Unmodified 1246.634 0.63397086 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.18 3.82 6 11 2 2 2 1 1 1 1 1 1 1 1 1 1 1 22.466 21.108 2;3 0.00017742 21119 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 77.062 58.317 1257600000 605460000 242270000 108680000 17003000 16414000 31798000 15701000 14393000 16206000 32920000 0 36372000 33910000 35431000 51014000 53138 1986 47700 446348;446349;446350;446351;446352;446353;446354;446355;446356;446357;446358;446359;446360;446361;446362;446363;446364 352830;352831;352832;352833;352834;352835;352836;352837;352838;352839;352840;352841;352842;352843;352844 352842 14 TQNDVLHAENVK Unmodified 1366.6841 0.68409218 1345 P35241 RDX Radixin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.57 3.85 6 2 6 2 4 2 2 1 1 2 30.846 28.429 2;3 4.4552E-13 37940 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 169.65 135.4 3476000000 112700000 3012900000 37018000 0 0 0 0 0 0 0 97998000 44851000 0 39945000 130620000 53139 1345 47701 446365;446366;446367;446368;446369;446370;446371;446372;446373;446374;446375;446376;446377;446378 352845;352846;352847;352848;352849;352850;352851;352852;352853;352854 352846 6 TQNFLIQK Unmodified 990.54983 0.54983053 710 O95999 BCL10 B-cell lymphoma/leukemia 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.33 2 2 11 2 2 1 1 1 1 1 1 1 1 1 1 1 48.156 46.626 2 0.006809 51027 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.909 70.083 352910000 68633000 216710000 0 4005100 4252100 4473700 5147500 5141200 3073100 9867800 6689700 0 6918000 4693600 13312000 53140 710 47702 446379;446380;446381;446382;446383;446384;446385;446386;446387;446388;446389;446390;446391;446392;446393 352855;352856;352857;352858;352859;352860;352861;352862;352863;352864;352865;352866;352867 352859 11 TQNGEIVQFK Unmodified 1162.5982 0.59823728 4808 Q9P265 DIP2B Disco-interacting protein 2 homolog B yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 50.993 45.672 2 0.039082 59256 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.507 38.034 145880000 0 145880000 0 0 0 0 0 0 0 0 0 0 0 0 0 53141 4808 47703 446394;446395 352868;352869 352868 2 TQNGVSEREQNGFSVK Unmodified 1778.8547 0.85473933 2021 P98082 DAB2 Disabled homolog 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.946 31.134 3 0.00070934 33809 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 54.768 37.067 208220000 0 0 0 8589700 7045500 12557000 17361000 14208000 15359000 18870000 22901000 27214000 17492000 15332000 31292000 53142 2021 47704 446396;446397;446398;446399;446400;446401;446402;446403;446404;446405;446406;446407 352870;352871;352872;352873;352874;352875;352876;352877;352878;352879;352880;352881;352882;352883;352884 352872 15 TQNILLDNEFHVK Unmodified 1569.8151 0.81510635 320 O43353 RIPK2 Receptor-interacting serine/threonine-protein kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 4 1 1 2 78.874 74.318 2;3 1.3214E-08 93444 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.53 93.499 97236000 19704000 53612000 23919000 0 0 0 0 0 0 0 0 0 0 0 0 53143 320 47705 446408;446409;446410;446411 352885;352886;352887 352885 3 TQNPMVTGTSVLGVK Oxidation (M) 1546.8025 0.80249275 1229 P28070 PSMB4 Proteasome subunit beta type-4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.67 3.89 4 1 4 1 3 1 1 1 1 1 61.107 58.117 2;3 1.5918E-22 74348 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.57 104.68 1029900000 39397000 938340000 8562900 0 0 0 0 0 0 0 10653000 7651700 0 7292200 17987000 53144 1229 47706 446412;446413;446414;446415;446416;446417;446418;446419;446420 352888;352889;352890;352891;352892;352893;352894;352895;352896;352897;352898;352899 352888 1822 11 TQNPMVTGTSVLGVK Unmodified 1530.8076 0.80757813 1229 P28070 PSMB4 Proteasome subunit beta type-4 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.08 3.93 5 1 6 1 3 2 1 1 1 1 1 1 74.35 72.161 2;3 2.5428E-30 90787 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 160.22 144.36 2700500000 76455000 2468800000 9820200 10485000 0 0 0 0 0 0 23391000 18496000 5688300 14687000 72647000 53145 1229 47706 446421;446422;446423;446424;446425;446426;446427;446428;446429;446430;446431;446432 352900;352901;352902;352903;352904;352905;352906;352907;352908;352909;352910;352911 352902 11 TQNVLGEK Unmodified 887.47125 0.47124585 1156 P23396 RPS3 40S ribosomal protein S3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 17.596 17.782 2 0.010789 17386 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 78.516 17.756 1020800000 0 0 0 67236000 74231000 75027000 64987000 0 60783000 122230000 108180000 2744500 149890000 138480000 157020000 53146 1156 47707 446433;446434;446435;446436;446437;446438;446439;446440;446441;446442;446443 352912;352913;352914;352915;352916 352914 5 TQPDGTSVPGEPASPISQR Unmodified 1922.9334 0.93338358 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 52.073 52.208 2 0.00026202 58945 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 59.898 51.593 51892000 0 0 0 3420800 4695000 5828500 4734700 0 3140300 4629300 6084900 6010900 6368500 0 6978700 53147 2459 47708 446444;446445;446446;446447;446448;446449;446450;446451;446452;446453 352917;352918;352919;352920;352921 352918 5 TQPHHSTPTK Unmodified 1132.5625 0.56252048 2189 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 0 0 0 By MS/MS 2 0 1 1 1.8423 -1.4523 2 0.0029036 2257 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 99.568 99.568 42130000 42130000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53148 2189 47709 446454 352922 352922 1 TQPPEDISCIAWNR Unmodified 1685.7832 0.78315429 614 O94979 SEC31A Protein transport protein Sec31A yes yes 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 73.753 73.797 2 0.00020909 84677 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.979 56.188 52046000 0 0 0 2128700 3737300 4984700 0 3250000 3460600 4226000 5342600 8911900 4293200 0 11711000 53149 614 47710 446455;446456;446457;446458;446459;446460;446461;446462;446463;446464 352923;352924;352925 352923 3 TQPSSGVDSAVGTLPATSPQSTSVQAK Unmodified 2600.293 0.29295372 2289 Q13428 TCOF1 Treacle protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.229 63.324 3 2.7509E-21 71881 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.726 62.104 221070000 0 0 0 14326000 13147000 14441000 12329000 18726000 14087000 23363000 24774000 22323000 19148000 18858000 25547000 53150 2289 47711 446465;446466;446467;446468;446469;446470;446471;446472;446473;446474;446475;446476 352926;352927;352928;352929;352930;352931;352932;352933;352934;352935;352936;352937;352938 352928 13 TQPSSQPLQSGQVLPSATPTPSAPPTSQQELQAK Unmodified 3485.7638 0.76380564 4510 Q9HCD5 NCOA5 Nuclear receptor coactivator 5 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 74.809 74.872 3 0.0021496 85573 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 20.655 18.774 32832000 0 0 0 0 5111500 0 3868000 0 0 5494900 0 6135600 6132700 6089100 0 53151 4510 47712 446477;446478;446479;446480;446481;446482 352939 352939 1 TQPTSLPK Unmodified 870.48108 0.48108226 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.281 21.485 2 0.043235 22116 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 49.325 18.022 624110000 0 0 0 45670000 30410000 49765000 41916000 30736000 34248000 55578000 66747000 84836000 53974000 47680000 82553000 53152 1226 47713 446483;446484;446485;446486;446487;446488;446489;446490;446491;446492;446493;446494 352940 352940 1 TQQAAQANITLQEQIEAIHK Unmodified 2234.1655 0.16550878 2539 Q15459 SF3A1 Splicing factor 3A subunit 1 yes yes 0 0 0 By MS/MS 3 0 1 1 76.77 73.292 3 0.018168 88112 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 30.094 20.911 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53153 2539 47714 446495 352941 352941 1 TQQGAALQNYNNELVK Acetyl (Protein N-term) 1831.9064 0.90644055 368 O43805 SSNA1 Sjoegren syndrome nuclear autoantigen 1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 70.659 70.852 2 4.8848E-24 80945 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 142.91 120.71 26765000 0 0 0 0 0 0 2145100 2272300 0 4045500 5200400 5043500 2919900 5138200 0 53154 368 47715 446496;446497;446498;446499;446500;446501;446502;446503 352942;352943;352944;352945;352946;352947;352948;352949 352944 8 TQQLHPVLQK Unmodified 1190.6772 0.6771563 4327 Q9H0G5 NSRP1 Nuclear speckle splicing regulatory protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 6 2 2 2 35.53 30.646 2;3 0.00080819 42698 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 114.5 80.407 505170000 266810000 150870000 87489000 0 0 0 0 0 0 0 0 0 0 0 0 53155 4327 47716 446504;446505;446506;446507;446508;446509 352950;352951;352952;352953 352951 3 TQQMNNDLEK Unmodified 1219.5503 0.55030081 2676 Q3V6T2 CCDC88A Girdin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 17.364 17.614 2 0.010295 16234 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 56.258 32.83 14526000 0 0 0 0 0 1647000 1577400 0 0 1855900 1969600 0 2532200 2377100 2566800 53156 2676 47717 446510;446511;446512;446513;446514;446515;446516 352954;352955;352956;352957;352958 352957 5 TQQMNNDLEK Oxidation (M) 1235.5452 0.54521543 2676 Q3V6T2 CCDC88A Girdin yes yes 0 1 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 7.7963 7.97 2 0.0076369 6323 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 53.968 30.539 8939000 0 0 0 0 0 648770 1045400 0 653860 0 1779300 2297200 960940 0 1553700 53157 2676 47717 446517;446518;446519;446520;446521;446522;446523 352959;352960 352960 4339 2 TQQPLMLK Oxidation (M) 973.52665 0.52665224 2582 Q15813 TBCE Tubulin-specific chaperone E yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 40.145 35.286 2 0.028773 45370 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.616 50.468 67079000 0 67079000 0 0 0 0 0 0 0 0 0 0 0 0 0 53158 2582 47718 446524;446525 352961;352962;352963 352961 3 TQQQVEAEVTNIK Unmodified 1486.7627 0.76273643 4475 Q9H9Q2 COPS7B COP9 signalosome complex subunit 7b yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 48.989 48.755 2 0.0064068 55825 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 78.908 58.038 18510000 0 0 0 0 3578800 14931000 0 0 0 0 0 0 0 0 0 53159 4475 47719 446526;446527;446528 352964;352965 352965 2 TQQSPISNGSPELGIK Unmodified 1654.8526 0.85261407 2567 Q15723 ELF2 ETS-related transcription factor Elf-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 59.544 59.19 2 9.4936E-28 67267 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 134.99 116.85 161390000 0 26993000 0 7193500 7400400 8062300 10788000 11051000 8079200 11657000 13932000 18898000 12454000 9205100 15673000 53160 2567 47720 446529;446530;446531;446532;446533;446534;446535;446536;446537;446538;446539;446540;446541 352966;352967;352968;352969;352970;352971;352972;352973;352974;352975;352976;352977;352978;352979 352977 14 TQQTSPDKVDYEYSELLLYQNQVLR Unmodified 3029.4982 0.49819547 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 87.615 87.762 3 5.0159E-23 101834 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 81.12 75.833 12230000 0 0 0 0 0 0 0 0 0 5770300 3822600 2636700 0 0 0 53161 4226 47721 446542;446543;446544 352980;352981;352982;352983;352984 352982 5 TQQVVAIK Unmodified 885.52837 0.5283668 4811 Q9P289 STK26 Serine/threonine-protein kinase 26 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.914 29.109 2 0.0087284 31214 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 85.212 13.497 579430000 0 0 0 33969000 23308000 53179000 45768000 22379000 26520000 65244000 70902000 59850000 44470000 52908000 80934000 53162 4811 47722 446545;446546;446547;446548;446549;446550;446551;446552;446553;446554;446555;446556 352985;352986;352987;352988;352989;352990;352991 352988 6 TQQYDDLIDEFMK Unmodified 1644.7341 0.73413841 1154 P23368 ME2 NAD-dependent malic enzyme, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 90.283 90.43 2 0.015684 104987 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 48.741 40.16 6918400 0 0 0 0 0 0 0 0 0 2476300 1973800 2468400 0 0 0 53163 1154 47723 446557;446558;446559 352992 352992 1 TQRETGGFSQEELLK Unmodified 1721.8584 0.85842773 2432 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B yes yes 0 0 1 By MS/MS 2 0 1 1 56.907 53.055 3 0.0082454 66153 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 32.152 22.737 4093600 0 0 4093600 0 0 0 0 0 0 0 0 0 0 0 0 53164 2432 47724 446560 352993 352993 1 TQRPADVIFATVR Unmodified 1472.81 0.80996139 1334 P33993 MCM7 DNA replication licensing factor MCM7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.87 70.944 3 0.0043779 81462 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 47.201 42.885 304890000 0 0 0 10156000 8040600 39179000 14486000 15382000 15363000 24791000 28230000 38171000 19487000 21532000 70072000 53165 1334 47725 446561;446562;446563;446564;446565;446566;446567;446568;446569;446570;446571;446572 352994;352995;352996;352997;352998;352999;353000;353001;353002;353003;353004 352994 11 TQRQLVVTATDK Unmodified 1358.7518 0.75177781 2224 Q13017 ARHGAP5 Rho GTPase-activating protein 5 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 32.677 27.963 3 0.049224 35116 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 33.273 17.136 21615000 19952000 0 1663400 0 0 0 0 0 0 0 0 0 0 0 0 53166 2224 47726 446573;446574 353005 353005 1 TQSDAGEFQLPFDPR Unmodified 1706.79 0.79001381 1146 P22735 TGM1 Protein-glutamine gamma-glutamyltransferase K yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 14 1 1 2 1 2 1 1 1 1 1 1 1 83.619 83.689 2;3 1.2188E-05 96919 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 96.103 80.531 118390000 0 0 0 5136600 6719300 9713100 8337900 30900000 6418300 11585000 9262400 10756000 7507500 5203400 6848100 53167 1146 47727 446575;446576;446577;446578;446579;446580;446581;446582;446583;446584;446585;446586;446587;446588 353006;353007;353008;353009;353010;353011;353012;353013;353014;353015;353016;353017 353017 11 TQSEESRPQSLQQPATSTTETPASPAHTTPQTQSTSGR Unmodified 4009.8849 0.88493643 1019 P15336 ATF2 Cyclic AMP-dependent transcription factor ATF-2 yes yes 0 0 1 By matching By MS/MS By matching By matching By MS/MS 10 0 5 1 1 1 1 1 40.483 40.662 4 2.1312E-06 44502 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 29.369 24.607 27609000 0 0 0 0 0 5346900 4452100 0 0 7694200 0 0 4166000 5950000 0 53168 1019 47728 446589;446590;446591;446592;446593 353018 353018 1 TQSPGGCSAEAVLAR Unmodified 1502.7147 0.71474038 3925 Q96MH2 HEXIM2 Protein HEXIM2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 45.797 46.258 2 4.9886E-18 52106 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 127.37 100.86 16382000 0 0 0 0 0 0 0 6833000 0 0 0 9548800 0 0 0 53169 3925 47729 446594;446595;446596;446597;446598 353019;353020;353021;353022 353020 4 TQSRPGGPPNPPGPSPK Unmodified 1669.8536 0.85361712 690 O95785 WIZ Protein Wiz yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 26.628 26.785 3 1.4982E-06 28938 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 79.86 69.375 126140000 0 0 0 9393000 9696800 14427000 10985000 11712000 8286200 12980000 12963000 4954400 15971000 14772000 0 53170 690 47730 446599;446600;446601;446602;446603;446604;446605;446606;446607;446608;446609 353023;353024;353025;353026;353027;353028;353029;353030;353031;353032;353033;353034;353035;353036 353033 13 TQSSASLAASYAAQQHPQAAASYR Unmodified 2464.1731 0.17311336 3948 Q96PK6 RBM14 RNA-binding protein 14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 54.69 54.821 3 5.9741E-77 61513 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 134.28 127.49 163620000 0 0 0 5613700 5926600 7123700 7697200 9597300 8504700 16744000 21676000 20676000 15087000 12534000 32437000 53171 3948 47731 446610;446611;446612;446613;446614;446615;446616;446617;446618;446619;446620;446621 353037;353038;353039;353040;353041;353042;353043;353044;353045;353046;353047;353048;353049;353050;353051;353052;353053;353054 353041 17 TQSSLVEAFNK Unmodified 1222.6194 0.61936665 3312 Q8N1G0 ZNF687 Zinc finger protein 687 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 53.778 53.667 2;3 0.01838 64096 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 52.278 41.755 150490000 0 0 62982000 7090400 5400000 7076200 7177500 6229400 4263000 8201900 6102000 10080000 7223900 9322300 9344600 53172 3312 47732 446622;446623;446624;446625;446626;446627;446628;446629;446630;446631;446632;446633;446634 353055;353056;353057;353058;353059;353060;353061 353055 7 TQSSLVPALTDFVR Unmodified 1532.8199 0.81985737 442 O60888 CUTA Protein CutA yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 1 1 2 89.909 89.987 2;3 2.1113E-43 104258 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 167.2 150.48 193080000 0 0 0 1561200 3662600 4292500 4091400 7128700 4592400 11034000 24218000 22635000 3744800 21062000 85057000 53173 442 47733 446635;446636;446637;446638;446639;446640;446641;446642;446643;446644;446645;446646;446647 353062;353063;353064;353065;353066;353067;353068;353069;353070;353071;353072;353073;353074 353067 11 TQTAIASEDMPNTLTEAEK Unmodified 2048.9572 0.95721507 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.1 66.184 2 3.663E-58 75747 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 177.84 168.31 125150000 0 0 0 3929600 4210800 13199000 6086900 8107400 4283900 12829000 15292000 14072000 6041800 10643000 26457000 53174 2047 47734 446648;446649;446650;446651;446652;446653;446654;446655;446656;446657;446658;446659 353075;353076;353077;353078;353079;353080;353081;353082;353083;353084;353085;353086 353084 12 TQTAIASEDMPNTLTEAEK Oxidation (M) 2064.9521 0.95212969 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 1 0 By MS/MS 10 0 1 1 50.257 50.316 2 0.0013388 56928 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 46.481 38.871 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53175 2047 47734 446660 353087 353087 3330 1 TQTDFNDMEDDDPQISYMISAWAR Unmodified 2848.1956 0.19562422 149 O00410 IPO5 Importin-5 yes yes 0 0 0 By MS/MS 2 0 1 1 98.344 90.214 3 0.00020393 116428 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.489 48.051 8478300 8478300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53176 149 47735 446661 353088 353088 1 TQTESSTPPGIPGGSR Unmodified 1570.7587 0.75871368 292 O15530;Q6A1A2 PDPK1;PDPK2P 3-phosphoinositide-dependent protein kinase 1;Putative 3-phosphoinositide-dependent protein kinase 2 yes no 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.828 38.009 2 0.0014316 41926 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 53.967 39.547 49127000 0 0 0 2760400 2191300 3002000 3484800 4332300 3148900 3532200 4846200 9618400 2536700 3922800 5750600 53177 292 47736 446662;446663;446664;446665;446666;446667;446668;446669;446670;446671;446672;446673 353089;353090;353091;353092;353093;353094;353095;353096;353097 353093 8 TQTGDSSSISSFSYR Unmodified 1621.722 0.72199382 2689 Q4V328 GRIPAP1 GRIP1-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 51.199 51.308 2 9.4764E-23 56874 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 118.87 102.23 36081000 0 0 0 0 5753600 0 0 6219000 0 0 0 0 0 0 24108000 53178 2689 47737 446674;446675;446676;446677;446678 353098;353099;353100;353101;353102 353099 5 TQTILFYGR Unmodified 1097.5869 0.58694431 3945 Q96P63 SERPINB12 Serpin B12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.958 67.041 2 0.0074164 76688 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 72.485 59.496 334980000 0 0 0 64510000 16855000 27984000 14582000 46170000 11970000 33223000 25022000 31658000 28923000 16528000 17558000 53179 3945 47738 446679;446680;446681;446682;446683;446684;446685;446686;446687;446688;446689;446690 353103;353104;353105;353106;353107;353108;353109;353110;353111;353112;353113;353114 353105 11 TQTLDQENQQLQDQLRDAQQQVK Unmodified 2754.3533 0.35326257 4199 Q9BW19 KIFC1 Kinesin-like protein KIFC1 yes yes 0 0 1 By MS/MS 10 0 1 1 72.99 73.094 3 4.9723E-07 84227 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 53.059 32.86 13191000 0 0 0 0 0 0 0 0 0 13191000 0 0 0 0 0 53180 4199 47739 446691 353115 353115 1 TQTPAAQPVPR Unmodified 1164.6251 0.62512073 2916 Q6P1J9 CDC73 Parafibromin yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 25.318 25.567 2 0.0032196 25952 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.305 43.768 42754000 0 0 0 0 2933900 3686500 4213600 0 0 3468900 5251900 8672200 5752600 0 8773900 53181 2916 47740 446692;446693;446694;446695;446696;446697;446698;446699 353116;353117;353118;353119 353117 4 TQTPAAQPVPRPVSQARPPPNQK Unmodified 2464.3299 0.32988877 2916 Q6P1J9 CDC73 Parafibromin yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 1 2 2 2 2 2 2 2 2 2 2 2 37.508 37.717 3;4 2.0983E-09 41885 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 58.366 54.489 596550000 0 0 0 19481000 24985000 39507000 33213000 36674000 26712000 62663000 64959000 59128000 89967000 57430000 81831000 53182 2916 47741 446700;446701;446702;446703;446704;446705;446706;446707;446708;446709;446710;446711;446712;446713;446714;446715;446716;446717;446718;446719;446720;446721;446722 353120;353121;353122;353123;353124;353125;353126;353127;353128;353129;353130;353131;353132;353133;353134 353125 12 TQTPPLGQTPQLGLK Unmodified 1577.8777 0.8777066 1974 P78344 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 71.862 71.93 2;3 2.9043E-28 81859 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 142.08 114.07 2438200000 0 0 0 118840000 156270000 189490000 192810000 189800000 148580000 194170000 233870000 291020000 202350000 218590000 302360000 53183 1974 47742 446723;446724;446725;446726;446727;446728;446729;446730;446731;446732;446733;446734;446735;446736;446737;446738;446739;446740;446741;446742;446743;446744;446745;446746 353135;353136;353137;353138;353139;353140;353141;353142;353143;353144;353145;353146;353147;353148;353149;353150;353151;353152;353153;353154;353155;353156;353157;353158;353159;353160;353161;353162;353163;353164 353154 20 TQTPPVEENVTQK Unmodified 1469.7362 0.73618733 2923 Q6P1Q9 METTL2B Methyltransferase-like protein 2B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.942 34.125 2 3.1972E-05 36370 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 89.548 80.115 138430000 0 0 0 8118300 8255800 9580600 9820000 7722900 5994100 12581000 17562000 21205000 9367300 12416000 15812000 53184 2923 47743 446747;446748;446749;446750;446751;446752;446753;446754;446755;446756;446757;446758 353165;353166;353167;353168;353169 353168 5 TQTPPVSPAPQPTEER Unmodified 1733.8584 0.85842773 2399 Q14247 CTTN Src substrate cortactin yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 7 1 1 1 1 1 1 1 40.504 40.683 2 0.0103 45287 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 36.847 28.334 17330000 0 0 0 0 1523100 0 2663700 0 2316200 2154200 3326900 0 0 0 5345600 53185 2399 47744 446759;446760;446761;446762;446763;446764;446765 353170;353171;353172 353171 3 TQTPPVSPAPQPTEERLPSSPVYEDAASFK Unmodified 3225.583 0.58298773 2399 Q14247 CTTN Src substrate cortactin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.95 2.64 2 1 19 2 1 1 2 2 2 1 1 1 2 2 1 2 2 77.894 77.471 3;4 7.0069E-138 89207 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 155.45 146.15 688280000 0 175650000 6956500 8650300 38213000 34719000 26509000 31898000 28159000 38594000 62763000 86733000 25496000 55951000 67994000 53186 2399 47745 446766;446767;446768;446769;446770;446771;446772;446773;446774;446775;446776;446777;446778;446779;446780;446781;446782;446783;446784;446785;446786;446787 353173;353174;353175;353176;353177;353178;353179;353180;353181;353182;353183;353184;353185;353186;353187;353188;353189 353178 17 TQTQRPNLIGLTSGDMDVNPR Unmodified 2312.1543 0.15429217 4822 Q9P2N5 RBM27 RNA-binding protein 27 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 74.407 74.649 3 9.0683E-07 85165 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 61.703 58.416 16244000 0 0 0 0 0 0 0 0 0 0 0 0 0 4399500 11844000 53187 4822 47746 446788;446789 353190;353191 353191 1 TQTQRPNLIGLTSGDMDVNPR Oxidation (M) 2328.1492 0.14920679 4822 Q9P2N5 RBM27 RNA-binding protein 27 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 64.719 64.72 3 0.00024005 73185 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 42.618 37.859 38545000 0 0 0 6162700 0 0 0 5644500 5979300 0 0 0 10086000 10672000 0 53188 4822 47746 446790;446791;446792;446793;446794 353192;353193;353194;353195 353194 6198 2 TQTRLEGEVTPNSLSTSYK Unmodified 2110.0542 0.054227 3250 Q8IWZ3 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 58.204 56.3 3 8.0465E-07 70177 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 89.846 85.408 41636000 5255300 0 10554000 0 0 0 4267800 6510400 0 7124400 0 0 7923400 0 0 53189 3250 47747 446795;446796;446797;446798;446799;446800;446801;446802 353196;353197;353198;353199;353200;353201;353202;353203;353204;353205 353204 9 TQTSDPAMLPTMIGLLAEAGVR 2 Oxidation (M) 2303.1501 0.150118 304 O43175 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 2 90.661 90.736 2;3 2.0646E-08 105058 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.366 53.928 15192000 0 0 0 0 1448700 1710400 0 0 0 0 1765900 1677600 0 0 8589900 53190 304 47748 446803;446804;446805;446806;446807;446808 353206;353207 353206 393;394 2 TQTSMSLGTTR Unmodified 1181.571 0.57103625 3384 Q8NB16 MLKL Mixed lineage kinase domain-like protein yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.334 30.512 2 0.0022314 33543 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 68.657 57.297 88786000 0 0 0 3001000 4716500 8606000 6999000 7857200 5380100 10175000 10594000 11261000 6432600 0 13764000 53191 3384 47749 446809;446810;446811;446812;446813;446814;446815;446816;446817;446818;446819;446820 353208;353209;353210;353211;353212;353213;353214;353215;353216;353217;353218;353219 353209 12 TQTSMSLGTTREK Oxidation (M) 1454.7035 0.70350699 3384 Q8NB16 MLKL Mixed lineage kinase domain-like protein yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 13.283 10.485 3 0.0049377 13490 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 85.554 76.504 18226000 0 8500900 9725300 0 0 0 0 0 0 0 0 0 0 0 0 53192 3384 47750 446821;446822 353220 353220 4948 0 TQTVCNFTDGALVQHQEWDGK Unmodified 2433.1019 0.10192225 2054 Q01469;A8MUU1 FABP5;FABP5P3 Fatty acid-binding protein, epidermal;Putative fatty acid-binding protein 5-like protein 3 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 73.032 72.989 3 3.1203E-38 84497 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 97.457 93.795 97083000 0 0 0 37617000 8191900 16292000 0 6411600 5891000 9934600 12744000 0 0 0 0 53193 2054 47751 446823;446824;446825;446826;446827;446828;446829;446830;446831;446832 353221;353222;353223;353224;353225;353226;353227;353228;353229;353230;353231 353230 10 TQTVENVEHLQTR Unmodified 1553.7798 0.77978347 299 O43156 TTI1 TELO2-interacting protein 1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 35.783 35.915 3 0.00053621 39712 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 57.328 49.547 96828000 0 0 0 6745300 7095000 11562000 8130200 7521200 7990700 8309300 9059200 13939000 7147500 9328900 0 53194 299 47752 446833;446834;446835;446836;446837;446838;446839;446840;446841;446842;446843 353232;353233;353234;353235;353236 353232 5 TQVAGGQLSFK Unmodified 1134.6033 0.60332266 1495 P46060 RANGAP1 Ran GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 53.824 47.87 2 0.010044 62305 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.55 49.425 984200000 34881000 764810000 184510000 0 0 0 0 0 0 0 0 0 0 0 0 53195 1495 47753 446844;446845;446846 353237;353238;353239 353238 3 TQVCGILR Unmodified 945.50659 0.5065855 947 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 42.373 42.729 2 0.016804 48159 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.682 10.671 154910000 0 0 0 0 0 14005000 6839800 0 0 11046000 28086000 20501000 0 18826000 55604000 53196 947 47754 446847;446848;446849;446850;446851;446852;446853 353240;353241;353242;353243 353240 4 TQVDAQLQVVRK Unmodified 1383.7834 0.78341229 2816 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 48.282 41.588 3 0.03408 54699 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 23.149 1.5175 17135000 8367600 8767600 0 0 0 0 0 0 0 0 0 0 0 0 0 53197 2816 47755 446854;446855 353244 353244 1 TQVEASEESALNHLQNPGDAAEGR Unmodified 2522.1633 0.16333653 5257 Q9Y605 MRFAP1 MORF4 family-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 63.089 62.413 3 2.525E-77 71243 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 136.56 129.03 247890000 0 25747000 0 7071200 11022000 14851000 13131000 11317000 9072100 22268000 25655000 27448000 14280000 19821000 46205000 53198 5257 47756 446856;446857;446858;446859;446860;446861;446862;446863;446864;446865;446866;446867;446868;446869 353245;353246;353247;353248;353249;353250;353251;353252;353253;353254;353255;353256;353257;353258;353259;353260;353261 353249 17 TQVEASEESALNHLQNPGDAAEGRAAK Unmodified 2792.3325 0.33252713 5257 Q9Y605 MRFAP1 MORF4 family-associated protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 1 2 62.367 57.884 3;4 9.7907E-78 74535 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.01 117.34 135460000 0 33572000 101890000 0 0 0 0 0 0 0 0 0 0 0 0 53199 5257 47757 446870;446871;446872 353262;353263;353264 353263 3 TQVELLEAPTPALK Unmodified 1508.845 0.84500949 989 P13807 GYS1 Glycogen [starch] synthase, muscle yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 78.631 78.698 2 0.00036257 90550 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.479 66.046 44347000 0 0 0 4103200 0 0 0 4018100 0 5420900 8697200 0 3733900 6200500 12173000 53200 989 47758 446873;446874;446875;446876;446877;446878;446879;446880;446881;446882 353265;353266;353267;353268;353269;353270;353271;353272;353273;353274 353267 10 TQVELVADPETR Unmodified 1356.6885 0.68850885 4000 Q96T60 PNKP Bifunctional polynucleotide phosphatase/kinase;Polynucleotide 3'-phosphatase;Polynucleotide 5'-hydroxyl-kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 51.772 51.884 2 0.039314 58878 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 43.897 22.449 32503000 0 0 0 0 5030000 4952800 4456400 0 4337500 0 0 0 0 6077400 7649300 53201 4000 47759 446883;446884;446885;446886;446887;446888 353275 353275 1 TQVSVTAAIPHLK Unmodified 1363.7823 0.78234966 4752 Q9NYV4 CDK12 Cyclin-dependent kinase 12 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 76.229 70.582 3 0.0047367 91159 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.524 41.339 68050000 49520000 18530000 0 0 0 0 0 0 0 0 0 0 0 0 0 53202 4752 47760 446889;446890;446891 353276;353277 353277 2 TQVTVQYMQDR Oxidation (M) 1383.6453 0.64526383 1297 P31153 MAT2A S-adenosylmethionine synthase isoform type-2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 2 1 1 1 1 33.116 33.368 2 0.0040336 35919 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.348 10.886 35644000 0 0 0 0 3365300 0 0 0 5806700 3555900 0 7963200 4081500 0 10872000 53203 1297 47761 446892;446893;446894;446895;446896;446897;446898;446899 353278;353279;353280;353281 353281 1914 4 TQVTVQYMQDR Unmodified 1367.6503 0.65034921 1297 P31153 MAT2A S-adenosylmethionine synthase isoform type-2 yes yes 0 0 0 By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.407 46.573 2 0.00027773 52368 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 104.52 65.218 225910000 0 0 0 4510800 6140700 8628800 7761400 7409000 6566300 11538000 35386000 25649000 11844000 23745000 76728000 53204 1297 47761 446900;446901;446902;446903;446904;446905;446906;446907;446908;446909;446910;446911 353282;353283;353284;353285;353286 353282 5 TQVVAGTNYYIK Unmodified 1355.7085 0.70851601 742 P01040 CSTA Cystatin-A;Cystatin-A, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 55.457 54.807 2 2.0676E-08 62207 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 160.53 130.86 2484300000 0 43007000 0 612320000 139960000 120900000 151650000 247600000 94072000 153010000 191470000 303630000 120380000 131360000 174900000 53205 742 47762 446912;446913;446914;446915;446916;446917;446918;446919;446920;446921;446922;446923;446924;446925 353287;353288;353289;353290;353291;353292;353293;353294;353295;353296;353297;353298;353299;353300;353301;353302;353303;353304;353305;353306;353307;353308;353309;353310;353311;353312;353313;353314;353315;353316;353317;353318;353319;353320;353321;353322;353323;353324 353288 38 TQYEEHIYR Unmodified 1237.5728 0.57275081 3994 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.257 27.454 3 0.0063091 29295 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 65.347 56.834 146570000 0 0 0 5566200 6736600 11570000 10674000 9199300 6058100 10759000 18030000 17874000 12182000 13465000 24452000 53206 3994 47763 446926;446927;446928;446929;446930;446931;446932;446933;446934;446935;446936;446937 353325;353326;353327;353328;353329;353330;353331;353332;353333 353329 9 TQYEEIAQR Unmodified 1136.5462 0.54620171 83 CON__Q01546 yes yes 0 0 0 By MS/MS 10 0 1 1 30.341 30.028 2 0.012915 32720 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 60.589 34.175 + 17646000 0 0 0 17646000 0 0 0 0 0 0 0 0 0 0 0 53207 83 47764 446938 353334 353334 1 TQYEELK Unmodified 909.44436 0.4443624 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.015 22.222 2 0.023435 23008 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 85.265 43.036 452340000 0 0 0 19913000 19412000 32150000 36805000 21708000 25900000 49215000 47424000 51302000 36968000 50262000 61280000 53208 965 47765 446939;446940;446941;446942;446943;446944;446945;446946;446947;446948;446949;446950 353335;353336;353337;353338;353339;353340;353341;353342;353343;353344 353336 10 TRAEAEAAAVHGAR Unmodified 1408.7171 0.71712364 2786 Q5T8P6 RBM26 RNA-binding protein 26 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 14.21 14.008 3 4.0565E-14 12568 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 126.09 108.87 1421000000 160230000 0 0 75062000 102060000 77371000 64151000 102860000 58775000 154200000 96053000 194520000 133880000 76229000 125570000 53209 2786 47766 446951;446952;446953;446954;446955;446956;446957;446958;446959;446960;446961;446962;446963 353345;353346;353347;353348;353349;353350;353351;353352;353353;353354;353355;353356;353357;353358 353348 10 TRCTSCGVVAENYK Unmodified 1643.7396 0.73957492 4722 Q9NXA8 SIRT5 NAD-dependent protein deacylase sirtuin-5, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 29.54 25.127 3 0.0037547 35051 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.079 51.641 34942000 31935000 0 3006700 0 0 0 0 0 0 0 0 0 0 0 0 53210 4722 47767 446964;446965 353359 353359 1 TRDAEALVGQVLVK Unmodified 1497.8515 0.85149185 2443 Q14746 COG2 Conserved oligomeric Golgi complex subunit 2 yes yes 0 0 1 By MS/MS 2 0 1 1 76.015 73.253 3 0.029743 89195 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 35.037 14.084 5838000 0 0 5838000 0 0 0 0 0 0 0 0 0 0 0 0 53211 2443 47768 446966 353360 353360 1 TRDGGSVVGASVFYK Unmodified 1541.7838 0.78380622 391 O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes yes 0 0 1 By MS/MS 2 0 1 1 66.663 58.368 3 0.025599 78487 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 34.909 26.999 22868000 22868000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53212 391 47769 446967 353361 353361 1 TRDIQEEELEVLLEEEAAGGDEDREK Unmodified 3001.4 0.39999757 2295 Q13459 MYO9B Unconventional myosin-IXb yes yes 0 0 2 By MS/MS 2 0 1 1 89.958 81.828 4 8.5923E-06 106277 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 59.893 56.552 18242000 18242000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53213 2295 47770 446968 353362 353362 1 TREAIAMLHK Unmodified 1168.6387 0.63866231 3326 Q8N3U4 STAG2 Cohesin subunit SA-2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 2 30.474 30.613 3 0.026974 33027 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 30.06 24.839 47715000 0 0 0 2681000 2773400 0 3548200 3949000 3733600 0 0 11182000 5686400 14162000 0 53214 3326 47771 446969;446970;446971;446972;446973;446974;446975;446976;446977 353363;353364;353365 353365 3 TREAQQALGSAAADATEAK Unmodified 1887.9286 0.92863256 933 P11047 LAMC1 Laminin subunit gamma-1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 46.328 41.639 3 0.00037303 51988 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 58.123 46.603 28050000 0 13174000 14875000 0 0 0 0 0 0 0 0 0 0 0 0 53215 933 47772 446978;446979 353366;353367 353367 2 TREEECHFYAGGQVYPGEASR Unmodified 2442.0659 0.065871094 2245 Q13162 PRDX4 Peroxiredoxin-4 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 2 3 2 1 2 2 48.075 48.492 3;4 5.098E-59 54176 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 128.88 125.69 232980000 0 0 0 0 0 0 3629900 0 0 22562000 33116000 55006000 11542000 25925000 81197000 53216 2245 47773 446980;446981;446982;446983;446984;446985;446986;446987;446988;446989;446990;446991;446992 353368;353369;353370;353371;353372;353373;353374;353375 353374 4 TREFLAHSAK Unmodified 1158.6146 0.61455605 3887 Q96J01 THOC3 THO complex subunit 3 yes yes 0 0 1 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 14.311 14.577 3 0.045041 13169 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.894 14.516 188210000 0 0 0 0 0 17124000 0 10870000 0 20459000 20517000 29532000 30240000 19077000 40388000 53217 3887 47774 446993;446994;446995;446996;446997;446998;446999;447000 353376 353376 0 TREIFTNLAPFSEVSADGEK Unmodified 2210.0855 0.085527128 3488 Q8TCE6;Q6NSW5 FAM45A;FAM45B Protein FAM45A;Protein FAM45B yes no 0 0 1 By MS/MS 2 0 1 1 88.546 80.415 3 0.033699 104651 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 19.044 10.112 9808400 9808400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53218 3488 47775 447001 353377 353377 1 TREPVTDNVEK Unmodified 1286.6466 0.64664404 5299 Q9Y6X9 MORC2 MORC family CW-type zinc finger protein 2 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 20 1 1 2 2 2 2 2 2 2 2 2 15.199 15.429 2;3 0.012174 15004 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 84.17 35.374 89982000 0 0 0 0 948080 3777500 6926500 4900600 3904300 7094900 17001000 14268000 3650700 10159000 17351000 53219 5299 47776 447002;447003;447004;447005;447006;447007;447008;447009;447010;447011;447012;447013;447014;447015;447016;447017;447018;447019;447020;447021 353378;353379;353380;353381;353382;353383;353384 353383 5 TRESAWTKPDGVK Unmodified 1473.7576 0.75759147 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 23.726 23.925 3 0.0018082 24123 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 82.515 60.966 353240000 0 0 0 19263000 20354000 21735000 25271000 35162000 0 28488000 51187000 53202000 51766000 0 46814000 53220 213 47777 447022;447023;447024;447025;447026;447027;447028;447029;447030;447031 353385;353386;353387;353388;353389;353390;353391;353392 353391 3 TRESDRLEEK Unmodified 1261.6262 0.62624295 5054 Q9UPQ0 LIMCH1 LIM and calponin homology domains-containing protein 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 6.9849 6.6587 3 0.012871 4195 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.171 26.77 274910000 0 3501100 16894000 10451000 18671000 19941000 24167000 18781000 29137000 20838000 25619000 29163000 20852000 0 36891000 53221 5054 47778 447032;447033;447034;447035;447036;447037;447038;447039;447040;447041;447042;447043;447044 353393;353394;353395;353396;353397;353398 353393 3 TREVLIETAK Unmodified 1158.6608 0.66083754 2237 Q13126 MTAP S-methyl-5'-thioadenosine phosphorylase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 5.56 3.98 5 4 2 1 2 1 1 1 1 34.467 31.936 2;3 3.5814E-05 46389 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 133.89 94.871 1150200000 843700000 14703000 222860000 0 0 0 0 0 0 0 10539000 13689000 0 9087300 35568000 53222 2237 47779 447045;447046;447047;447048;447049;447050;447051;447052;447053 353399;353400;353401;353402;353403;353404;353405 353400 7 TREWAEQLTK Unmodified 1260.6463 0.64625011 3251 Q8IWZ8 SUGP1 SURP and G-patch domain-containing protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 48.54 40.826 3 0.0483 56729 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 59.265 49.034 14608000 14608000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53223 3251 47780 447054 353406 353406 0 TRGDGPFLDSLAK Unmodified 1375.7096 0.70957864 3116 Q7Z6K5 ARPIN Arpin yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 59.832 59.614 3 0.0032015 66735 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.82 27.377 70495000 0 0 3827700 4860000 2284000 7858400 5337300 4183900 4056800 7105200 6852600 8476400 0 6812700 8840600 53224 3116 47781 447055;447056;447057;447058;447059;447060;447061;447062;447063;447064;447065;447066 353407;353408;353409;353410;353411;353412 353408 6 TRGGGQSVQFTDIETLK Unmodified 1835.9377 0.93774068 2072 Q02241 KIF23 Kinesin-like protein KIF23 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.43 2.06 1 13 1 1 1 1 1 1 1 1 1 1 1 2 1 66.769 66.275 3 0.00048167 88450 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.475 51.213 187810000 81775000 0 0 4037900 4016400 11341000 6631500 7310900 9575800 8963000 12220000 13422000 8158400 9694400 10666000 53225 2072 47782 447067;447068;447069;447070;447071;447072;447073;447074;447075;447076;447077;447078;447079;447080 353413;353414;353415;353416;353417;353418;353419;353420;353421;353422 353418 9 TRGLEEIPVFDISEK Unmodified 1731.9043 0.90431529 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 82.794 82.018 3 0.0016505 104830 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.223 37.848 69164000 31319000 0 0 0 0 2958800 0 2915300 2963100 3335300 2742300 6316000 0 2946600 13668000 53226 2804 47783 447081;447082;447083;447084;447085;447086;447087;447088;447089 353423;353424;353425;353426;353427;353428 353427 6 TRHDVGLPGVSR Unmodified 1292.6949 0.69493163 1970 P78316 NOP14 Nucleolar protein 14 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 33.436 33.487 3 0.012139 36397 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 31.881 22.449 32290000 0 0 0 6696100 0 0 8585600 4370700 5026900 0 0 0 0 7610200 0 53227 1970 47784 447090;447091;447092;447093;447094 353429;353430;353431;353432 353432 4 TRHLALNLQEK Unmodified 1321.7466 0.74663285 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 2 1 1 1 1 1 1 36.476 36.651 3 0.0039979 40264 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 57.802 52.916 247850000 0 0 0 8199400 3953200 35015000 11141000 12043000 18727000 15413000 18535000 35304000 19515000 27593000 42407000 53228 2431 47785 447095;447096;447097;447098;447099;447100;447101;447102;447103;447104;447105;447106;447107 353433;353434;353435;353436;353437;353438;353439;353440;353441;353442 353441 5 TRHPDLPFPEITK Unmodified 1549.8253 0.8252771 4800 Q9P0W2 HMG20B SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related yes yes 0 0 1 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 67.012 67.368 3 0.016062 76215 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.654 32.036 24088000 0 0 0 0 0 0 0 1783500 0 0 2608400 6746000 0 0 12950000 53229 4800 47786 447108;447109;447110;447111 353443 353443 1 TRLDAPRLETK Unmodified 1298.7306 0.73064844 2939 Q6P6C2 ALKBH5 RNA demethylase ALKBH5 yes yes 0 0 2 By MS/MS 2 0 1 1 41.212 34.532 3 0.019124 47722 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.435 35.392 13971000 13971000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53230 2939 47787 447112 353444 353444 1 TRLDNGVTGFIPTK Unmodified 1517.8202 0.82019173 3038 Q7KZ85 SUPT6H Transcription elongation factor SPT6 yes yes 0 0 1 By MS/MS 2 0 1 1 75.421 67.291 3 0.00039507 88888 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.372 65.104 21573000 21573000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53231 3038 47788 447113 353445 353445 1 TRLDSSIR Unmodified 946.51959 0.51959303 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 17.915 18.103 2 0.003581 18022 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 155.07 75.952 668610000 0 0 0 63312000 42884000 63299000 46316000 40777000 34679000 69243000 56704000 60882000 66607000 53916000 69990000 53232 1518 47789 447114;447115;447116;447117;447118;447119;447120;447121;447122;447123;447124;447125 353446;353447;353448;353449;353450;353451;353452;353453;353454 353452 1 TRLEISNPIPIK Unmodified 1379.8136 0.81364979 3639 Q92614 MYO18A Unconventional myosin-XVIIIa yes yes 0 0 1 By MS/MS 2 0 1 1 79.36 71.23 3 0.010076 93584 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.343 46.432 12297000 12297000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53233 3639 47790 447126 353455 353455 1 TRLELEENQMK Oxidation (M) 1405.6871 0.68712864 4879 Q9UG63 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.64 1.67 1 21 1 2 2 2 2 1 2 2 2 1 2 1 2 26.962 26.979 2;3 0.00076537 29136 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 68.676 58.021 536370000 0 0 60935000 24005000 33744000 52261000 54781000 21142000 46107000 49757000 66454000 14066000 48688000 8780000 55649000 53234 4879 47791 447127;447128;447129;447130;447131;447132;447133;447134;447135;447136;447137;447138;447139;447140;447141;447142;447143;447144;447145;447146;447147;447148 353456;353457;353458;353459;353460;353461;353462;353463;353464;353465;353466;353467;353468 353459 6236 8 TRLELEENQMK Unmodified 1389.6922 0.69221402 4879 Q9UG63 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 4 24 2 2 2 2 2 2 2 2 2 2 2 2 2 2 39.281 38.669 2;3 0.00059638 42595 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 128.01 96.593 879160000 29918000 0 31520000 30798000 33398000 67203000 53951000 54431000 53121000 66797000 99448000 101740000 64444000 69559000 122840000 53235 4879 47791 447149;447150;447151;447152;447153;447154;447155;447156;447157;447158;447159;447160;447161;447162;447163;447164;447165;447166;447167;447168;447169;447170;447171;447172;447173;447174;447175;447176 353469;353470;353471;353472;353473;353474;353475;353476;353477;353478;353479;353480;353481;353482;353483;353484;353485;353486;353487;353488;353489;353490;353491 353479 19 TRLENQNLLIQVEEVSQTCSK Unmodified 2488.2592 0.25915117 3242 Q8IWJ2 GCC2 GRIP and coiled-coil domain-containing protein 2 yes yes 0 0 1 By MS/MS 2 0 1 1 87.704 79.574 3 0.0019726 103554 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.611 36.165 5626000 5626000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53236 3242 47792 447177 353492 353492 1 TRLEQEIATYR Unmodified 1378.7205 0.72047768 56;70;84;73;981;76;97 CON__P02533;P02533;CON__Q9D312;CON__P08779;P08779;CON__Q9Z2K1;CON__Q3ZAW8;CON__P13646-1;CON__P19012;P19012;P13646;CON__ENSEMBL:ENSP00000377550;CON__Q04695;Q04695;CON__Q61782 KRT14;KRT16;KRT15;KRT13;KRT17 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16;Keratin, type I cytoskeletal 15;Keratin, type I cytoskeletal 13;Keratin, type I cytoskeletal 17 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 25 2 2 2 2 3 2 2 2 2 2 2 2 50.02 50.176 2;3 6.11E-73 57562 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 217.14 150.44 + 3475200000 0 0 0 337950000 59007000 189570000 159460000 815360000 96662000 220360000 174340000 374680000 711330000 198710000 137750000 53237 56;70;73;76;981;84;97 47793 447178;447179;447180;447181;447182;447183;447184;447185;447186;447187;447188;447189;447190;447191;447192;447193;447194;447195;447196;447197;447198;447199;447200;447201;447202 353493;353494;353495;353496;353497;353498;353499;353500;353501;353502;353503;353504;353505;353506;353507;353508;353509;353510;353511;353512;353513;353514;353515;353516;353517;353518;353519;353520 353516 18 TRLEQEIATYRR Unmodified 1534.8216 0.82158871 56;70;84;97 CON__P02533;P02533;CON__Q9D312;CON__P08779;P08779;CON__Q9Z2K1;CON__Q3ZAW8;CON__Q04695;Q04695;CON__Q61782 KRT14;KRT16;KRT17 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16;Keratin, type I cytoskeletal 17 no no 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 1 2 1 2 2 2 2 2 2 1 2 44.605 44.811 3;4 1.1916E-25 51266 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 145.6 132.97 + 4063800000 0 0 0 374390000 35050000 345160000 95031000 435000000 269210000 172800000 198590000 415900000 1298900000 172890000 250900000 53238 56;70;84;97 47794 447203;447204;447205;447206;447207;447208;447209;447210;447211;447212;447213;447214;447215;447216;447217;447218;447219;447220;447221;447222;447223 353521;353522;353523;353524;353525;353526;353527;353528;353529;353530;353531;353532;353533;353534;353535;353536;353537;353538;353539;353540;353541;353542;353543;353544;353545;353546;353547;353548;353549;353550;353551;353552;353553;353554;353555 353555 30 TRLHDELEEAK Unmodified 1339.6732 0.67319314 329 O43432 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 24.451 24.912 3 0.016411 25015 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.092 16.533 57175000 0 0 0 0 0 0 0 0 6946700 0 7729900 14611000 0 9200700 18687000 53239 329 47795 447224;447225;447226;447227;447228 353556;353557 353556 2 TRLLQQNTQLK Unmodified 1341.7728 0.7728476 2061 Q01664 TFAP4 Transcription factor AP-4 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 33.256 33.196 3 0.034076 36700 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 24.726 16.656 14701000 0 0 0 0 6014200 0 0 0 0 0 0 0 0 8687000 0 53240 2061 47796 447229;447230 353558 353558 1 TRNDVFYLQPER Unmodified 1536.7685 0.76849051 2390 Q14202 ZMYM3 Zinc finger MYM-type protein 3 yes yes 0 0 1 By MS/MS 10 0 1 1 56.943 57.554 3 0.017432 64633 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 29.324 24.777 10312000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10312000 53241 2390 47797 447231 353559 353559 1 TRNEELAQTWK Unmodified 1374.6892 0.68917755 3476 Q8TAT6 NPLOC4 Nuclear protein localization protein 4 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 34.348 34.419 3 0.047918 37818 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 31.801 15.027 16851000 0 0 0 3276700 0 0 0 0 0 0 0 0 6525800 7048800 0 53242 3476 47798 447232;447233;447234 353560 353560 1 TRNEMTAEEK Unmodified 1207.5503 0.55030081 5231 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 6.7417 6.8605 3 0.0073808 5091 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 45.829 27.965 47539000 0 0 0 2731600 2429200 3847500 3451600 3430700 4849700 0 8037100 3347200 5314800 3486600 6612600 53243 5231 47799 447235;447236;447237;447238;447239;447240;447241;447242;447243;447244;447245 353561;353562;353563;353564;353565 353563 5 TRPAANPIQFTLNK Unmodified 1569.8627 0.86272524 1171 P23921 RRM1 Ribonucleoside-diphosphate reductase large subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 64.074 64.166 2;3 1.8745E-12 73043 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 99.752 76.379 1058800000 0 0 0 56114000 36281000 135070000 77692000 53684000 42464000 97242000 97994000 134540000 59234000 77963000 190560000 53244 1171 47800 447246;447247;447248;447249;447250;447251;447252;447253;447254;447255;447256;447257;447258;447259;447260;447261;447262;447263;447264;447265;447266;447267;447268;447269 353566;353567;353568;353569;353570;353571;353572;353573;353574;353575;353576;353577;353578;353579;353580;353581;353582;353583;353584;353585 353576 20 TRPEDYRQVSK Unmodified 1377.7001 0.70007659 2005 P83436 COG7 Conserved oligomeric Golgi complex subunit 7 yes yes 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 16.361 13.085 3 0.011341 18964 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.82 54.967 125540000 121260000 0 4286700 0 0 0 0 0 0 0 0 0 0 0 0 53245 2005 47801 447270;447271 353586 353586 0 TRPEGEPSSLSPEELAFAR Unmodified 2072.0174 0.017447563 4118 Q9BRT9 GINS4 DNA replication complex GINS protein SLD5;DNA replication complex GINS protein SLD5, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 74.309 74.396 3 1.3206E-12 85275 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.088 59.698 48997000 0 0 0 0 2964700 4952600 0 5894700 0 6715900 8079700 0 0 5499100 14890000 53246 4118 47802 447272;447273;447274;447275;447276;447277;447278;447279 353587;353588;353589;353590;353591;353592;353593;353594;353595 353589 9 TRPEPTEVLHACK Unmodified 1536.7719 0.77186132 3591 Q8WXH0 SYNE2 Nesprin-2 yes yes 0 0 1 By MS/MS 2 0 1 1 42.416 35.68 3 0.0010171 49108 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.234 56.288 10307000 10307000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53247 3591 47803 447280 353596;353597 353597 2 TRPESICSVTPSTHDK Unmodified 1813.8629 0.86286118 4489 Q9HAU0 PLEKHA5 Pleckstrin homology domain-containing family A member 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 29.621 28.544 3 0.0019818 29910 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 46.249 35.764 71840000 47338000 0 3220200 0 0 0 3103300 0 0 0 0 5085700 5016400 2996800 5080000 53248 4489 47804 447281;447282;447283;447284;447285;447286;447287 353598;353599;353600 353600 3 TRPEVGEMLR Unmodified 1186.6128 0.61284149 4556 Q9NPQ8 RIC8A Synembryn-A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 40.884 41.01 3 0.0072524 44320 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.401 34.623 64582000 0 0 0 3495500 3648400 6998800 4227100 9150700 3271500 5925400 4582100 0 7213800 5260200 10809000 53249 4556 47805 447288;447289;447290;447291;447292;447293;447294;447295;447296;447297;447298 353601;353602;353603 353602 3 TRPTTLGSSQFSGSGIDER Unmodified 1994.9657 0.96574634 4004 Q99081 TCF12 Transcription factor 12 yes yes 0 0 1 By MS/MS 10 0 1 1 48.699 48.928 3 0.035018 54298 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 36.997 13.516 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53250 4004 47806 447299 353604 353604 1 TRPVVAAGAVGLAQR Unmodified 1464.8525 0.85249491 944 P11310 ACADM Medium-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 48.406 49.135 3 0.0022151 54424 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.734 37.19 32339000 0 0 0 0 0 0 0 0 0 0 0 11650000 0 0 20689000 53251 944 47807 447300;447301 353605 353605 1 TRQDGSQEAPEAPLSSELEPFHPK Unmodified 2649.2671 0.26707332 2427 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 72.668 72.449 4 8.9903E-08 89335 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 72.227 62.641 65363000 0 0 20065000 0 0 5573800 0 0 4321400 6408000 8287600 8746900 0 0 11960000 53252 2427 47808 447302;447303;447304;447305;447306;447307;447308 353606;353607;353608;353609;353610 353609 5 TRQEPTSESSMEDSPTTER Unmodified 2166.9335 0.93351952 238 O14981 BTAF1 TATA-binding protein-associated factor 172 yes yes 0 0 1 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 25.068 25.184 3 5.7639E-06 25599 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.361 61.174 11221000 0 0 0 0 1677000 0 2104900 0 1772500 0 0 0 0 0 5667000 53253 238 47809 447309;447310;447311;447312 353611;353612 353612 2 TRQLDEDLLVLDELK Unmodified 1798.9676 0.96764382 4862 Q9UBW7 ZMYM2 Zinc finger MYM-type protein 2 yes yes 0 0 1 By MS/MS 2 0 1 1 93.303 85.173 3 0.00042444 110292 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.98 45.66 5273800 5273800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53254 4862 47810 447313 353613 353613 1 TRQVCPLDNREWEFQK Unmodified 2105.0113 0.011256748 1923 P62877 RBX1 E3 ubiquitin-protein ligase RBX1;E3 ubiquitin-protein ligase RBX1, N-terminally processed yes yes 0 0 2 By MS/MS 10 0 1 1 59.576 60.169 4 0.046891 68047 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 20.252 14.01 9245900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9245900 53255 1923 47811 447314 353614 353614 1 TRRDEPTGEVLSLVGK Unmodified 1755.9479 0.94791144 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 65.282 65.524 3 0.002803 74640 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.52 51.728 78310000 0 0 0 0 0 11565000 0 0 10686000 6285800 0 13584000 0 7091000 29099000 53256 528 47812 447315;447316;447317;447318;447319;447320 353615;353616;353617;353618 353618 3 TRSEIAQLSQEK Unmodified 1388.726 0.72595699 3128 Q86SQ7 SDCCAG8 Serologically defined colon cancer antigen 8 yes yes 0 0 1 By MS/MS 2 0 1 1 39.616 32.993 3 0.0022616 45785 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.76 42.459 18892000 18892000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53257 3128 47813 447321 353619 353619 1 TRSGTHSQSLPDS Unmodified 1371.6379 0.63787026 2304 Q13503 MED21 Mediator of RNA polymerase II transcription subunit 21 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 12.077 11.591 2;3 0.018772 16289 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.781 59.663 43118000 23066000 0 3065600 0 1424300 0 0 2308600 1555800 1546000 0 3725700 1887000 1615900 2923900 53258 2304 47814 447322;447323;447324;447325;447326;447327;447328;447329;447330;447331 353620;353621 353620 2 TRSIGSAVDQGNESIVAK Unmodified 1830.9436 0.94355434 4329 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 49.989 43.388 2;3 4.6209E-07 59764 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 124.62 124.62 184910000 167240000 0 17665000 0 0 0 0 0 0 0 0 0 0 0 0 53259 4329 47815 447332;447333;447334 353622;353623;353624;353625 353624 3 TRSLDFPQNEPQIK Unmodified 1671.858 0.8580338 3424 Q8NEF9 SRFBP1 Serum response factor-binding protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 65.178 56.889 3 0.0048719 76721 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.841 40.043 22202000 22202000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53260 3424 47816 447335 353626 353626 1 TRSLISMDEINK Unmodified 1405.7235 0.72351415 4031 Q99598 TSNAX Translin-associated protein X yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 67.033 59.53 2;3 8.9683E-09 79344 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 122.51 73.093 430920000 407200000 23714000 0 0 0 0 0 0 0 0 0 0 0 0 0 53261 4031 47817 447336;447337;447338 353627;353628;353629;353630;353631 353631 5 TRTEELIVQTK Unmodified 1316.73 0.72997974 4252 Q9BYT8 NLN Neurolysin, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 5 2 1 2 41.655 36.499 2;3 0.0030837 48255 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.924 49.916 128530000 60762000 12541000 55223000 0 0 0 0 0 0 0 0 0 0 0 0 53262 4252 47818 447339;447340;447341;447342;447343 353632;353633;353634;353635;353636 353632 5 TRTFNTSTGGLLLPSDTK Unmodified 1907.9953 0.99525556 973 P12956 XRCC6 X-ray repair cross-complementing protein 6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.36 2.17 2 23 1 1 1 2 2 2 2 2 2 2 2 2 2 2 68.191 67.774 2;3 1.303E-29 76777 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 111.82 101.19 1754700000 533780000 57597000 0 48004000 39229000 104790000 69171000 67204000 68533000 98696000 129520000 129800000 91334000 93048000 223990000 53263 973 47819 447344;447345;447346;447347;447348;447349;447350;447351;447352;447353;447354;447355;447356;447357;447358;447359;447360;447361;447362;447363;447364;447365;447366;447367;447368 353637;353638;353639;353640;353641;353642;353643;353644;353645;353646;353647;353648;353649;353650;353651;353652;353653;353654;353655;353656;353657;353658;353659 353650 22 TRTPASINATPANINLADLTR Unmodified 2209.1815 0.1814932 3038 Q7KZ85 SUPT6H Transcription elongation factor SPT6 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 79.432 79.584 3 9.5875E-29 91645 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 103.26 95.076 52507000 0 0 0 0 0 0 0 2980600 0 9583800 7329400 7940000 3946400 4540900 16186000 53264 3038 47820 447369;447370;447371;447372;447373;447374;447375 353660;353661;353662;353663;353664;353665;353666 353661 7 TRTSQEELLAEVVQGQSR Unmodified 2030.0392 0.039245638 2960 Q6PJT7 ZC3H14 Zinc finger CCCH domain-containing protein 14 yes yes 0 0 1 By matching By matching By MS/MS 10 0 3 1 1 1 75.856 76.062 3 8.6408E-09 87291 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.713 71.133 14639000 0 0 0 0 0 0 0 0 0 3499800 2115100 0 0 0 9024300 53265 2960 47821 447376;447377;447378 353667 353667 0 TRTTILQSTGK Unmodified 1204.6776 0.67755023 2916 Q6P1J9 CDC73 Parafibromin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 20.974 21.247 3 0.012449 21462 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 32.263 19.451 64747000 0 0 0 0 3286400 0 6734300 0 6071700 5523100 11097000 10728000 8269200 5417600 7619500 53266 2916 47822 447379;447380;447381;447382;447383;447384;447385;447386;447387 353668 353668 1 TRVLGQVSCELVSPK Unmodified 1671.8978 0.89779012 2126 Q06265 EXOSC9 Exosome complex component RRP45 yes yes 0 0 1 By MS/MS 2 0 1 1 72.818 64.621 3 0.00042281 85760 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.354 64.296 14369000 14369000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53267 2126 47823 447388 353669 353669 1 TRYDSGQDLDEEGMNMGDFDPNNIFK Oxidation (M) 3023.2549 0.25493001 4035 Q99615 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 0 1 1 By MS/MS 2 0 2 2 86.527 78.396 3 7.1005E-26 101304 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.019 88.171 18826000 18826000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53268 4035 47824 447389;447390 353670;353671;353672 353670 5543;5544 3 TRYDSGQDLDEEGMNMGDFDPNNIFK Unmodified 3007.26 0.26001539 4035 Q99615 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 0 0 1 By MS/MS 2 0 1 1 91.777 83.647 3 3.674E-38 108484 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 111.4 105.04 15152000 15152000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53269 4035 47824 447391 353673 353673 1 TSAALQTHFNEVHAK Unmodified 1652.8271 0.82706802 2594 Q15911 ZFHX3 Zinc finger homeobox protein 3 yes yes 0 0 0 By MS/MS 2 0 1 1 47.234 39.756 3 0.00074226 54764 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.168 34.711 21075000 21075000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53270 2594 47825 447392 353674;353675;353676 353675 3 TSAALSTVGSAISR Unmodified 1319.7045 0.70449327 325 O43399 TPD52L2 Tumor protein D54 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 2 2 1 1 2 1 1 1 2 1 2 2 57.566 57.665 2;3 3.2622E-22 65489 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 146.16 127.85 1119300000 0 0 0 57186000 75314000 64796000 44276000 69945000 49354000 94879000 129360000 187630000 109100000 99569000 137900000 53271 325 47826 447393;447394;447395;447396;447397;447398;447399;447400;447401;447402;447403;447404;447405;447406;447407;447408;447409;447410 353677;353678;353679;353680;353681;353682;353683;353684;353685;353686;353687;353688;353689;353690;353691;353692;353693 353679 15 TSAALSTVGSAISRK Unmodified 1447.7995 0.79945628 325 O43399 TPD52L2 Tumor protein D54 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 3 24 2 1 2 2 2 2 2 2 2 2 2 2 2 2 51.419 50.729 2;3 6.3845E-58 56787 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 207.88 179.86 2879000000 53862000 11286000 0 125480000 139190000 170700000 177940000 215160000 162650000 251110000 338180000 355540000 254860000 200480000 422590000 53272 325 47827 447411;447412;447413;447414;447415;447416;447417;447418;447419;447420;447421;447422;447423;447424;447425;447426;447427;447428;447429;447430;447431;447432;447433;447434;447435;447436;447437 353694;353695;353696;353697;353698;353699;353700;353701;353702;353703;353704;353705;353706;353707;353708;353709;353710;353711;353712;353713;353714;353715;353716;353717;353718;353719;353720;353721;353722;353723;353724;353725;353726;353727;353728;353729;353730;353731;353732;353733;353734 353710 40 TSAAMLSQQVASVK Unmodified 1419.7392 0.73916421 2958 Q6PJG2 ELMSAN1 ELM2 and SANT domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 56.946 57.391 2 1.3179E-12 64517 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 106.38 86.238 25629000 0 0 0 0 0 0 0 0 0 8104300 0 7375000 0 0 10150000 53273 2958 47828 447438;447439;447440;447441;447442;447443 353735;353736;353737;353738;353739;353740;353741;353742 353737 8 TSACFEPSLDYMVTK Oxidation (M) 1763.7746 0.77462302 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 1 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 75.568 71.821 2 4.1917E-10 89581 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.16 94.999 166770000 0 164900000 1870400 0 0 0 0 0 0 0 0 0 0 0 0 53274 1300 47829 447444;447445;447446 353743;353744 353743 1920 2 TSACFEPSLDYMVTK Unmodified 1747.7797 0.7797084 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 83.218 79.222 2 0.042178 98442 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 54.309 53.269 514890000 0 514890000 0 0 0 0 0 0 0 0 0 0 0 0 0 53275 1300 47829 447447;447448 353745 353745 1 TSADGNEK Unmodified 820.35628 0.35627567 1869 P61981 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes yes 0 0 0 By MS/MS 1 0 1 1 106.71 111.97 2 0.0259 92649 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 143.11 95.364 335680000 335680000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53276 1869 47830 447449 353746 353746 0 TSAEAPSHHLQQQQQQQR Unmodified 2101.0049 0.0049258171 3636 Q92609 TBC1D5 TBC1 domain family member 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.085 11.245 3 2.1111E-05 9749 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 67.605 52.184 27713000 0 0 0 0 1250900 2562900 1692900 2104200 1819600 2277900 2796800 3209800 2756900 1725900 5515700 53277 3636 47831 447450;447451;447452;447453;447454;447455;447456;447457;447458;447459;447460 353747;353748;353749;353750;353751;353752;353753;353754;353755;353756;353757 353757 11 TSAFIAGAK Unmodified 864.47052 0.47051757 3320 Q8N3C0 ASCC3 Activating signal cointegrator 1 complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 31.486 30.679 2 0.020833 33145 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 52.786 28.154 76511000 0 50025000 0 3724800 0 3306300 0 2779000 2359800 4168000 3072200 0 3992600 3084000 0 53278 3320 47832 447461;447462;447463;447464;447465;447466;447467;447468;447469;447470 353758;353759;353760;353761;353762;353763 353762 6 TSAGTTDPEEATR Unmodified 1334.595 0.5950024 2398 Q14244 MAP7 Ensconsin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.969 15.14 2 4.567E-75 13703 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 192.44 187.83 573630000 0 0 0 35165000 32962000 32323000 40512000 34842000 28534000 44421000 69888000 76748000 60392000 52798000 65045000 53279 2398 47833 447471;447472;447473;447474;447475;447476;447477;447478;447479;447480;447481;447482 353764;353765;353766;353767;353768;353769;353770;353771;353772;353773;353774 353771 11 TSAGTTDPEEATRLLAEK Unmodified 1888.9378 0.93780026 2398 Q14244 MAP7 Ensconsin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.4 3.77 2 1 2 1 1 1 1 1 66.428 63.149 3 1.048E-29 77335 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 131.45 131.45 88157000 13063000 43917000 7815400 0 0 0 0 0 10634000 12726000 0 0 0 0 0 53280 2398 47834 447483;447484;447485;447486;447487 353775;353776;353777 353776 2 TSAHYEENK Unmodified 1077.4727 0.47270242 3050 Q7L576;Q96F07 CYFIP1;CYFIP2 Cytoplasmic FMR1-interacting protein 1;Cytoplasmic FMR1-interacting protein 2 yes no 0 0 0 By MS/MS 2.5 0.5 1 1 2 5.6333 2.3325 2 2.5614E-06 4330 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 167.23 167.23 145290000 0 145290000 0 0 0 0 0 0 0 0 0 0 0 0 0 53281 3050 47835 447488;447489 353778;353779 353778 2 TSAIPQYHLAMSDGSIR Oxidation (M) 1861.8992 0.89924668 2834 Q5VZL5 ZMYM4 Zinc finger MYM-type protein 4 yes yes 0 1 0 By matching By matching By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 58.809 58.835 3 0.0011537 67122 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 42.277 31.422 14206000 0 0 0 0 1993200 0 2907700 0 0 3183700 0 0 2776800 3344900 0 53282 2834 47836 447490;447491;447492;447493;447494 353780 353780 4499 1 TSALENYINR Acetyl (Protein N-term) 1221.599 0.59896556 688 O95777 LSM8 U6 snRNA-associated Sm-like protein LSm8 yes yes 1 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 80.243 80.404 2 0.0014992 92636 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.177 60.353 30011000 0 0 0 0 0 0 0 1943100 0 0 4541000 3714100 1271900 4389900 14151000 53283 688 47837 447495;447496;447497;447498;447499;447500 353781;353782;353783 353781 3 TSALSDETK Unmodified 950.45566 0.45565537 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.43 3.02 1 2 11 1 2 1 1 1 1 1 1 1 1 1 1 1 11.203 10.567 2 2.0454E-09 9757 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 163.99 72.359 561440000 1450100 323140000 0 0 12504000 21854000 21845000 15573000 15275000 16932000 22032000 30968000 22251000 19885000 37729000 53284 1986 47838 447501;447502;447503;447504;447505;447506;447507;447508;447509;447510;447511;447512;447513;447514 353784;353785;353786;353787;353788;353789;353790;353791;353792;353793;353794;353795;353796;353797;353798 353788 13 TSALTCSLPK Unmodified 1076.5536 0.55359527 3086 Q7Z3T8 ZFYVE16 Zinc finger FYVE domain-containing protein 16 yes yes 0 0 0 By MS/MS 2 0 1 1 49.931 44.225 2 0.0023931 57407 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.36 84.838 64243000 0 64243000 0 0 0 0 0 0 0 0 0 0 0 0 0 53285 3086 47839 447515 353799 353799 1 TSAPITCELLNK Unmodified 1345.6912 0.69115139 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.72 2 13 1 1 1 1 1 1 2 1 1 1 1 1 1 1 66.321 65.775 2 3.8456E-08 75218 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 123.86 90.971 1549700000 0 1100500000 5617300 22150000 26445000 24176000 19344000 24412000 20830000 38800000 57257000 80038000 31420000 38848000 59895000 53286 2392 47840 447516;447517;447518;447519;447520;447521;447522;447523;447524;447525;447526;447527;447528;447529;447530 353800;353801;353802;353803;353804;353805;353806;353807;353808;353809;353810;353811 353804 11 TSAQVSLAAGHK Unmodified 1168.62 0.62003536 166 O00534 VWA5A von Willebrand factor A domain-containing protein 5A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 5 3 1 1 25.848 21.224 2;3 0.0035128 30715 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.378 30.371 107100000 53451000 45055000 8589800 0 0 0 0 0 0 0 0 0 0 0 0 53287 166 47841 447531;447532;447533;447534;447535 353812;353813;353814;353815;353816;353817;353818;353819;353820 353817 9 TSAQVVLDGLVDK Unmodified 1343.7296 0.72964538 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 82.338 77.669 2 3.7977E-07 93846 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 111.86 87.825 165980000 13849000 147110000 5022600 0 0 0 0 0 0 0 0 0 0 0 0 53288 2361 47842 447536;447537;447538;447539 353821;353822;353823;353824 353822 2 TSASDVTNIYPGDAGK Unmodified 1594.7475 0.74748029 2484 Q15042 RAB3GAP1 Rab3 GTPase-activating protein catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 52.048 52.276 2 1.4675E-18 58573 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 107.39 88.607 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53289 2484 47843 447540;447541;447542;447543;447544;447545;447546;447547;447548 353825;353826;353827;353828;353829;353830;353831;353832;353833 353832 9 TSASIILR Unmodified 859.51272 0.51271674 1067 P17987 TCP1 T-complex protein 1 subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 2 1 1 1 2 1 1 1 45.371 45.583 2 0.006015 51430 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 104.45 49.007 531260000 0 0 0 8535900 10624000 34774000 24282000 44238000 17073000 40683000 46170000 80056000 36153000 50893000 137780000 53290 1067 47844 447549;447550;447551;447552;447553;447554;447555;447556;447557;447558;447559;447560;447561;447562 353834;353835;353836;353837;353838;353839;353840;353841;353842;353843;353844;353845;353846;353847 353842 13 TSASSRVETHQSEVAQSFSGEK Unmodified 2351.0989 0.098945361 5099 Q9Y2F5 ICE1 Little elongation complex subunit 1 yes yes 0 0 1 By MS/MS 2 0 2 2 41.158 34.477 3;4 3.2574E-40 47633 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 105.46 97.581 31835000 31835000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53291 5099 47845 447563;447564 353848;353849;353850 353850 3 TSATGGLGSIK Unmodified 990.53457 0.53457439 1125 P21359 NF1 Neurofibromin;Neurofibromin truncated yes yes 0 0 0 By MS/MS 2 0 1 1 36.922 32.007 2 0.00070404 42028 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.618 45.987 30199000 0 30199000 0 0 0 0 0 0 0 0 0 0 0 0 0 53292 1125 47846 447565 353851;353852;353853 353852 3 TSATVQKDELR Unmodified 1246.6517 0.65172941 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 1 By MS/MS 10 0 1 1 7.501 7.8354 3 0.029915 5283 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.589 9.717 3752000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3752000 53293 3443 47847 447566 353854 353854 0 TSAVPSPCGK Unmodified 1002.4804 0.48043033 1591 P49748 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 20.932 20.78 2 0.0046058 21595 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 72.23 35.529 3215000 0 0 0 3215000 0 0 0 0 0 0 0 0 0 0 0 53294 1591 47848 447567;447568;447569;447570;447571;447572;447573 353855;353856;353857;353858;353859;353860;353861 353860 7 TSAYGPPTR Unmodified 948.46649 0.46649483 5123 Q9Y2W2 WBP11 WW domain-binding protein 11 yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 20.589 20.933 2 0.0075848 21593 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 72.038 60.317 155900000 0 0 0 0 0 11523000 0 9720200 0 20642000 18804000 31711000 31701000 17133000 14668000 53295 5123 47849 447574;447575;447576;447577;447578;447579;447580;447581 353862;353863 353863 2 TSCALTIHAIGR Unmodified 1298.6765 0.67650438 2828 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 50.629 50.727 3 0.011107 56057 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 34.685 27.118 61061000 0 0 0 13352000 0 0 0 0 0 0 0 0 0 14038000 33672000 53296 2828 47850 447582;447583;447584 353864;353865 353865 2 TSCEFTGDILR Unmodified 1297.5973 0.597251 1121 P21281 ATP6V1B2 V-type proton ATPase subunit B, brain isoform yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 65.309 65.4 2 0.00051801 74894 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 82.645 71.837 47937000 0 0 0 0 4476100 7757200 6193700 4946800 5043100 0 0 0 7279200 0 12241000 53297 1121 47851 447585;447586;447587;447588;447589;447590;447591;447592 353866;353867;353868;353869;353870;353871;353872 353868 7 TSCGSPNYAAPEVISGR Unmodified 1764.8101 0.81009732 2238 Q13131;P54646 PRKAA1;PRKAA2 5'-AMP-activated protein kinase catalytic subunit alpha-1;5'-AMP-activated protein kinase catalytic subunit alpha-2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.441 55.567 2 5.3859E-10 62213 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 89.013 76.799 110610000 0 0 0 5395200 6442300 7856300 9119300 7314000 6359500 9564500 10328000 12618000 9403700 9627300 16584000 53298 2238 47852 447593;447594;447595;447596;447597;447598;447599;447600;447601;447602;447603;447604 353873;353874;353875;353876;353877;353878;353879;353880;353881;353882;353883;353884;353885 353881 13 TSCKDDEAVVQAPR Unmodified 1574.7359 0.73586975 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 26.516 26.341 3 1.9739E-05 28073 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 62.287 52.751 23031000 0 0 0 0 11187000 0 11844000 0 0 0 0 0 0 0 0 53299 1364 47853 447605;447606;447607;447608 353886;353887;353888;353889;353890 353886 5 TSDANETEDHLESLICK Unmodified 1960.8684 0.86840006 2170 Q09161 NCBP1 Nuclear cap-binding protein subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 2 3 1 75.507 71.472 2;3 8.9074E-64 89903 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 190.57 190.57 499160000 30781000 463950000 4430500 0 0 0 0 0 0 0 0 0 0 0 0 53300 2170 47854 447609;447610;447611;447612;447613;447614 353891;353892;353893;353894 353892 2 TSDANINWNNLK Unmodified 1388.6684 0.66844211 85 CON__Q29443;CON__Q0IIK2 yes no 0 0 0 By MS/MS 2 0 1 1 66.708 60.79 2 3.1145E-14 77635 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 173.75 155.14 + 65325000 0 65325000 0 0 0 0 0 0 0 0 0 0 0 0 0 53301 85 47855 447615 353895;353896 353895 2 TSDAPYDSADDWSEHISSSGK Unmodified 2253.9298 0.92981435 4138 Q9BTA9 WAC WW domain-containing adapter protein with coiled-coil yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60.878 60.036 3 2.2384E-59 68788 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 130.25 130.25 221320000 9022300 16267000 0 8803500 8079900 9534300 13443000 14230000 11880000 18583000 22173000 22493000 18788000 16366000 31660000 53302 4138 47856 447616;447617;447618;447619;447620;447621;447622;447623;447624;447625;447626;447627;447628;447629 353897;353898;353899;353900;353901;353902;353903;353904;353905;353906;353907;353908;353909;353910;353911;353912 353899 16 TSDAPYDSADDWSEHISSSGKK Unmodified 2382.0248 0.024777365 4138 Q9BTA9 WAC WW domain-containing adapter protein with coiled-coil yes yes 0 0 1 By MS/MS By matching By MS/MS 10 0 3 1 1 1 53.588 54.034 4 0.045565 60471 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 12.898 12.432 23521000 0 0 0 0 0 0 0 0 0 0 9343700 0 7322800 0 6854500 53303 4138 47857 447630;447631;447632 353913 353913 1 TSDFNTFLAQEGCTK Unmodified 1717.7618 0.76175015 4896 Q9UHD1 CHORDC1 Cysteine and histidine-rich domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.5 3.92 7 1 10 1 5 2 1 1 1 1 1 1 1 1 1 1 74.198 72.18 2;3 2.585E-50 89658 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 213.59 194.85 3169200000 25863000 2977400000 13676000 8066600 7298900 22268000 11623000 11253000 9980400 19188000 24727000 24885000 12953000 0 0 53304 4896 47858 447633;447634;447635;447636;447637;447638;447639;447640;447641;447642;447643;447644;447645;447646;447647;447648;447649;447650 353914;353915;353916;353917;353918;353919;353920;353921;353922;353923;353924;353925;353926;353927;353928;353929;353930;353931;353932;353933;353934;353935;353936;353937 353919 23 TSDIDNPSHFEK Unmodified 1388.6208 0.62082322 3267 Q8IXW5 RPAP2 Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 35.361 30.666 2 3.3656E-05 40220 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.48 88.104 13647000 0 13647000 0 0 0 0 0 0 0 0 0 0 0 0 0 53305 3267 47859 447651;447652 353938 353938 1 TSDIFEADIANDVK Unmodified 1536.7308 0.7307676 582 O94763 URI1 Unconventional prefoldin RPB5 interactor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 78.054 76.951 2 6.4621E-39 94694 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 163.12 148.15 304540000 8783700 244080000 0 0 3159800 6774000 4775400 4969900 3796400 7643300 6648100 0 5235000 8670200 0 53306 582 47860 447653;447654;447655;447656;447657;447658;447659;447660;447661;447662;447663;447664;447665 353939;353940;353941;353942;353943;353944;353945;353946;353947;353948;353949;353950 353942 12 TSDIFGSPVTATSR Unmodified 1437.71 0.70997257 4460 Q9H910 HN1L Hematological and neurological expressed 1-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 63.05 62.382 2 0.00036274 71517 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 90.685 80.597 171660000 0 47969000 0 9057700 8984500 10648000 0 13596000 7063100 12110000 0 52602000 9631900 0 0 53307 4460 47861 447666;447667;447668;447669;447670;447671;447672;447673;447674 353951;353952;353953;353954;353955;353956;353957;353958 353955 8 TSDIFGSPVTATSRLAHPNK Unmodified 2098.0807 0.080716522 4460 Q9H910 HN1L Hematological and neurological expressed 1-like protein yes yes 0 0 1 By MS/MS 2 0 1 1 76.176 68.045 4 0.0060713 89737 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 37.237 32.144 9887800 9887800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53308 4460 47862 447675 353959 353959 1 TSDISTLGHLVITTQGGYVK Unmodified 2089.1055 0.10553429 4584 Q9NR09 BIRC6 Baculoviral IAP repeat-containing protein 6 yes yes 0 0 0 By MS/MS 2 0 1 1 87.771 79.641 3 0.023952 103680 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 24.679 21.238 19145000 19145000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53309 4584 47863 447676 353960 353960 1 TSDLIVLGLPWK Unmodified 1340.7704 0.77038799 2242 Q13148 TARDBP TAR DNA-binding protein 43 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 94.178 94.253 2 2.0725E-35 109523 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 190.02 174.76 74675000 0 0 0 1600400 2223500 4954100 3093500 5964500 5781800 10251000 5916400 4164700 2249000 4664200 23812000 53310 2242 47864 447677;447678;447679;447680;447681;447682;447683;447684;447685;447686;447687;447688;447689 353961;353962;353963;353964;353965;353966;353967;353968;353969;353970;353971;353972;353973 353964 12 TSDLVEEYFEAHSSSK Unmodified 1827.8163 0.81628814 2283 Q13416 ORC2 Origin recognition complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77 76.021 3 7.5566E-15 87672 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 88.311 83.207 179500000 36369000 38083000 17759000 3615400 3122100 12888000 3576000 6999700 5547200 8297100 7582900 9275800 5295400 5619600 15471000 53311 2283 47865 447690;447691;447692;447693;447694;447695;447696;447697;447698;447699;447700;447701;447702;447703;447704 353974;353975;353976;353977;353978;353979;353980;353981;353982;353983;353984;353985;353986;353987 353974 14 TSDPTQDLHFTPLLSPSSSTSASSTAK Unmodified 2762.3246 0.32464778 4288 Q9C0D5 TANC1 Protein TANC1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 80.305 80.107 3 6.5259E-42 92721 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 91.583 79.841 189230000 0 11607000 0 6130300 10391000 13856000 10514000 13299000 10757000 17414000 14828000 23359000 14035000 15968000 27069000 53312 4288 47866 447705;447706;447707;447708;447709;447710;447711;447712;447713;447714;447715;447716;447717 353988;353989;353990;353991;353992;353993;353994;353995;353996;353997;353998;353999;354000;354001 353995 14 TSDQAYIEFESIEAIVK Unmodified 1941.9571 0.95713872 276 O15357 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 yes yes 0 0 0 By MS/MS 2 0 1 1 97.787 89.657 3 6.6162E-53 115754 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 111.78 95.029 24145000 24145000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53313 276 47867 447718 354002 354002 1 TSDQTWVK Unmodified 963.46616 0.46616048 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 25.103 25.082 2 0.016961 26999 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 66.429 32.914 40713000 0 0 0 8391100 9919600 0 0 0 10738000 0 0 0 0 11664000 0 53314 2392 47868 447719;447720;447721;447722 354003;354004;354005 354005 2 TSDSLLSMK Unmodified 980.48485 0.48484701 4669 Q9NVI1 FANCI Fanconi anemia group I protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 49.098 49.278 2 0.006156 54347 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.825 55.266 100420000 0 0 0 7147900 7215200 0 0 10687000 0 12984000 11648000 12373000 9708300 12274000 16383000 53315 4669 47869 447723;447724;447725;447726;447727;447728;447729;447730;447731;447732 354006;354007;354008;354009;354010;354011;354012;354013;354014 354007 9 TSDSPWFLSGSETLGR Unmodified 1738.8162 0.81622856 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 84.254 84.375 2 1.0268E-23 97398 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 122.46 107.77 25949000 0 0 0 0 0 4814200 0 0 6046400 0 0 0 3502900 0 11586000 53316 619 47870 447733;447734;447735;447736;447737 354015;354016;354017;354018 354017 4 TSDSTPDPQRVPLR Unmodified 1567.7954 0.79543354 1707 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.012 38.193 3 4.6334E-08 42367 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 73.927 60.827 193350000 0 0 0 11437000 10079000 15878000 13032000 15903000 10845000 18266000 20355000 19461000 20335000 14384000 23376000 53317 1707 47871 447738;447739;447740;447741;447742;447743;447744;447745;447746;447747;447748;447749 354019;354020;354021;354022;354023;354024;354025;354026;354027;354028;354029;354030;354031;354032 354019 14 TSDVTISSNK Unmodified 1050.5193 0.51931826 488 O75376 NCOR1 Nuclear receptor corepressor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.935 15.106 2 0.000517 14696 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 126.07 96.651 97137000 0 0 0 6207500 4879400 5500700 8437900 7333700 6227300 8906000 13496000 7415200 10614000 9819700 8299100 53318 488 47872 447750;447751;447752;447753;447754;447755;447756;447757;447758;447759;447760;447761 354033;354034;354035;354036;354037;354038;354039;354040;354041;354042;354043;354044 354043 12 TSEADDAAGAAAAAARPAPR Unmodified 1838.8871 0.88710209 3374 Q8N9B5 JMY Junction-mediating and -regulatory protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 40.473 40.724 3 1.0234E-20 45191 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 94.882 90.172 99453000 0 0 0 9233600 0 0 9018800 8866400 0 14841000 0 17922000 12025000 10817000 16729000 53319 3374 47873 447762;447763;447764;447765;447766;447767;447768;447769 354045;354046;354047;354048;354049;354050;354051;354052 354045 8 TSEDADELHK Unmodified 1143.5044 0.50439647 4978 Q9UKX7 NUP50 Nuclear pore complex protein Nup50 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 2 22 1 1 1 2 2 2 2 2 2 2 2 2 3 10.067 9.9214 2;3 0.016238 7981 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.399 44.335 442830000 1618000 285990000 0 5963200 7950800 0 15987000 9262400 9259400 11959000 16884000 21103000 12207000 16805000 27832000 53320 4978 47874 447770;447771;447772;447773;447774;447775;447776;447777;447778;447779;447780;447781;447782;447783;447784;447785;447786;447787;447788;447789;447790;447791;447792;447793 354053;354054;354055;354056;354057;354058;354059;354060;354061;354062;354063;354064;354065;354066 354056 1 TSEDICLQLSR Unmodified 1320.6344 0.63436479 3458 Q8NHP6 MOSPD2 Motile sperm domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 21.737 21.865 2 0.0219 22887 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 42.109 32.422 56026000 0 0 0 3230200 4657100 7776400 5062400 0 3199600 6397500 0 0 10105000 4261200 11336000 53321 3458 47875 447794;447795;447796;447797;447798;447799;447800;447801;447802 354067 354067 1 TSEDQAAILPGK Unmodified 1228.6299 0.62993134 2216 Q12968 NFATC3 Nuclear factor of activated T-cells, cytoplasmic 3 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 40.211 40.577 2 0.0068829 45245 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 50.805 38.957 21240000 0 0 0 0 0 0 3277400 0 2021300 3905500 0 3231100 4124600 0 4680500 53322 2216 47876 447803;447804;447805;447806;447807;447808 354068;354069 354069 2 TSEDQQTACGTIYSQTLSIK Unmodified 2230.0423 0.042341685 413 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta yes yes 0 0 0 By MS/MS 2 0 1 1 74.738 69.583 3 0.0004546 87415 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 25.581 16.872 25106000 0 25106000 0 0 0 0 0 0 0 0 0 0 0 0 0 53323 413 47877 447809 354070 354070 1 TSEEAVDPLGNYMVK Oxidation (M) 1667.7713 0.7712522 3964 Q96R06 SPAG5 Sperm-associated antigen 5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 68.413 67.307 2 0.00023821 77080 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 65.5 50.81 28493000 0 11859000 0 0 2401500 0 4388900 3764400 0 0 0 0 0 6079500 0 53324 3964 47878 447810;447811;447812;447813;447814 354071;354072;354073;354074 354071 5449 4 TSEEAVDPLGNYMVK Unmodified 1651.7763 0.77633758 3964 Q96R06 SPAG5 Sperm-associated antigen 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.217 76.275 2 0.0078287 87555 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.566 63.998 73550000 0 0 0 3964200 4296200 3788600 3951100 7264700 4705200 6676200 6845300 8495000 6354900 6378700 10829000 53325 3964 47878 447815;447816;447817;447818;447819;447820;447821;447822;447823;447824;447825;447826 354075 354075 0 TSEEGTSEENK Unmodified 1209.4997 0.49970503 5245 Q9Y5Q9 GTF3C3 General transcription factor 3C polypeptide 3 yes yes 0 0 0 By MS/MS 1 0 1 1 106.49 111.75 2 0.012167 92480 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 83.456 71.172 11170000 11170000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53326 5245 47879 447827 354076 354076 1 TSEEISLNDAGVELK Unmodified 1603.7941 0.79409613 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 73.124 73.214 2 0.00022396 83838 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.03 58.201 39553000 0 0 0 0 4084000 0 3691300 0 4738700 9862000 0 0 0 6651100 10526000 53327 2446 47880 447828;447829;447830;447831;447832;447833;447834 354077;354078;354079;354080;354081;354082 354079 6 TSEESWIEQQMLEDK Unmodified 1851.8197 0.81965896 3849 Q96G74 OTUD5 OTU domain-containing protein 5 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 83.933 79.936 2 2.1546E-102 99305 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 216.91 194 58443000 0 58443000 0 0 0 0 0 0 0 0 0 0 0 0 0 53328 3849 47881 447835;447836 354083;354084 354083 2 TSEFTAAFVGR Unmodified 1184.5826 0.58258722 3946 Q96P70 IPO9 Importin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 4 2 1 1 67.489 67.413 2 0.00035143 76189 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.267 36.518 36034000 0 0 0 0 7208800 0 0 8102100 0 0 0 0 0 0 20724000 53329 3946 47882 447837;447838;447839;447840 354085;354086;354087 354085 3 TSEGVTNEK Unmodified 963.4509 0.45090434 2294 Q13451 FKBP5 Peptidyl-prolyl cis-trans isomerase FKBP5;Peptidyl-prolyl cis-trans isomerase FKBP5, N-terminally processed yes yes 0 0 0 By MS/MS 1 0 1 1 106.83 112.1 2 0.0043671 92852 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 114.2 31.672 77934000 77934000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53330 2294 47883 447841 354088 354088 1 TSELLSGMGVSALEK Oxidation (M) 1536.7705 0.77052392 2267 Q13309 SKP2 S-phase kinase-associated protein 2 yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 68.648 68.793 2 0.0012195 79258 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 61.435 32.477 2142800 0 0 0 0 0 0 2142800 0 0 0 0 0 0 0 0 53331 2267 47884 447842;447843 354089;354090 354089 3697 2 TSELLSGMGVSALEK Unmodified 1520.7756 0.7756093 2267 Q13309 SKP2 S-phase kinase-associated protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 84.762 80.018 2 1.53E-56 99442 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 171.32 156.66 240750000 0 240750000 0 0 0 0 0 0 0 0 0 0 0 0 0 53332 2267 47884 447844 354091 354091 1 TSELLVRK Unmodified 944.56548 0.56548059 4193 Q9BVM2 DPCD Protein DPCD yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 28.636 24.249 2 0.048816 30510 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 99.375 52.54 184150000 170650000 0 13504000 0 0 0 0 0 0 0 0 0 0 0 0 53333 4193 47885 447845;447846 354092 354092 0 TSELSEAPQK Unmodified 1088.535 0.53496832 2676 Q3V6T2 CCDC88A Girdin yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 17.832 18.057 2 0.002556 17809 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 82.426 39.557 38963000 0 0 0 2376300 2554300 0 0 3431200 2224500 5092900 5346900 6317100 0 4096200 7523300 53334 2676 47886 447847;447848;447849;447850;447851;447852;447853;447854;447855 354093;354094;354095;354096;354097 354095 2 TSENLALTGVDHSLPQDGSNAFISQK Unmodified 2728.3304 0.33040186 412 O60563 CCNT1 Cyclin-T1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.619 77.677 3 3.9906E-172 88900 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 195.7 186.97 358840000 0 0 0 4834900 15946000 22981000 13208000 26040000 26398000 44555000 37006000 48834000 24272000 28530000 66234000 53335 412 47887 447856;447857;447858;447859;447860;447861;447862;447863;447864;447865;447866;447867 354098;354099;354100;354101;354102;354103;354104;354105;354106;354107;354108;354109;354110;354111;354112 354107 15 TSEQTGEPAEDTSGVIK Unmodified 1747.8112 0.81120276 4721 Q9NX74 DUS2 tRNA-dihydrouridine(20) synthase [NAD(P)+]-like yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 37.182 37.365 2 0.0017215 41152 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 62.924 52.4 26430000 0 0 0 0 1568500 3008400 1420500 0 0 4048700 6382000 5762400 0 4239400 0 53336 4721 47888 447868;447869;447870;447871;447872;447873;447874;447875 354113;354114;354115 354114 3 TSEQTLIDR Unmodified 1061.5353 0.53530267 5311 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.5 0.5 4 4 1 5 2 47.148 42.613 2 0.0046755 53993 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 113.7 68.615 + 75613000 0 38816000 36797000 0 0 0 0 0 0 0 0 0 0 0 0 53337 5311 47889 447876;447877;447878;447879;447880;447881;447882;447883 354116;354117;354118;354119;354120;354121;354122;354123;354124 354123 6 TSESLCQNNMVILK Oxidation (M) 1651.7909 0.79094179 237 O14980 XPO1 Exportin-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 51.686 51.906 2 0.00019151 57344 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.16 62.528 57120000 0 0 0 0 2595400 6775700 6053400 0 2157900 5916800 8960400 6739400 0 0 17921000 53338 237 47890 447884;447885;447886;447887;447888;447889;447890;447891 354125;354126;354127;354128 354126 323 3 TSESLCQNNMVILK Unmodified 1635.796 0.79602716 237 O14980 XPO1 Exportin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.397 67.479 2 1.2445E-26 76570 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 173.32 156.3 124130000 0 0 0 3457600 4592400 16379000 4641200 7918900 4361500 10820000 11956000 13228000 6540900 8713900 31523000 53339 237 47890 447892;447893;447894;447895;447896;447897;447898;447899;447900;447901;447902;447903 354129;354130;354131;354132;354133;354134;354135;354136;354137;354138;354139;354140 354132 12 TSESTGSLPSPFLR Unmodified 1477.7413 0.7412727 663 O95456 PSMG1 Proteasome assembly chaperone 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.42 1.93 1 11 1 1 1 1 1 1 1 1 1 1 1 1 74.701 74.451 2 6.3547E-19 84888 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 129.88 113.04 223510000 0 8668000 0 10630000 8451300 20850000 14298000 11032000 12801000 23183000 36299000 35858000 19289000 22145000 0 53340 663 47891 447904;447905;447906;447907;447908;447909;447910;447911;447912;447913;447914;447915 354141;354142;354143;354144;354145;354146;354147;354148;354149;354150;354151;354152 354148 12 TSESTGSLPSPFLRALK Unmodified 1789.9574 0.95741349 663 O95456 PSMG1 Proteasome assembly chaperone 1 yes yes 0 0 1 By MS/MS 2 0 1 1 86.657 78.527 3 0.00015329 102257 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 59.728 48.622 37125000 37125000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53341 663 47892 447916 354153 354153 1 TSETLSQAGQK Unmodified 1148.5673 0.56733108 1768 P55327 TPD52 Tumor protein D52 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.28 3.87 2 3 1 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 23.859 23.573 2 7.59E-196 12352 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 238.03 219.05 3465100000 178640000 143200000 6374400 180890000 188750000 163890000 207070000 223790000 202920000 326230000 347550000 382390000 333590000 267050000 312760000 53342 1768 47893 447917;447918;447919;447920;447921;447922;447923;447924;447925;447926;447927;447928;447929;447930;447931;447932;447933;447934 354154;354155;354156;354157;354158;354159;354160;354161;354162;354163;354164;354165;354166;354167;354168;354169;354170;354171;354172;354173;354174 354154 21 TSEVIEDEK Acetyl (Protein N-term) 1090.503 0.50299949 4180 Q9BV86 NTMT1 N-terminal Xaa-Pro-Lys N-methyltransferase 1;N-terminal Xaa-Pro-Lys N-methyltransferase 1, N-terminally processed yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.18 2.59 1 10 1 1 1 1 1 1 1 1 1 1 1 47.47 48.033 2 0.001237 46447 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 96.668 51.587 92035000 27759000 0 0 5720800 4018300 7985600 7291700 4069400 5198100 8302700 13012000 0 8677300 0 0 53343 4180 47894 447935;447936;447937;447938;447939;447940;447941;447942;447943;447944;447945 354175;354176;354177;354178;354179;354180;354181;354182;354183;354184;354185;354186 354178 12 TSEVPYAGINIGPVHK Unmodified 1680.8835 0.88352026 437 O60841 EIF5B Eukaryotic translation initiation factor 5B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 72.97 71.407 2;3 1.4329E-31 92139 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 129.77 121.96 915800000 200860000 305450000 44681000 14824000 13187000 45059000 16919000 28734000 19188000 41788000 34237000 35486000 26791000 26734000 61871000 53344 437 47895 447946;447947;447948;447949;447950;447951;447952;447953;447954;447955;447956;447957;447958;447959;447960;447961;447962 354187;354188;354189;354190;354191;354192;354193;354194;354195;354196;354197 354192 5 TSEVPYAGINIGPVHKK Unmodified 1808.9785 0.97848328 437 O60841 EIF5B Eukaryotic translation initiation factor 5B yes yes 0 0 1 By MS/MS By MS/MS 6 4 1 1 1 1 66.471 62.535 3;4 0.00042159 84958 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.932 73.827 21533000 16961000 0 0 0 0 0 0 0 0 0 4571800 0 0 0 0 53345 437 47896 447963;447964 354198;354199 354198 2 TSEVQELQNDLDRETSSLQELEAQK Unmodified 2889.384 0.38395357 4836 Q9UBC2 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 yes yes 0 0 1 By MS/MS 2 0 1 1 93.571 85.441 3 9.5837E-05 110728 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.061 48.338 8178500 8178500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53346 4836 47897 447965 354200 354200 1 TSFDKPDQMAALFK Unmodified 1597.781 0.78102903 5094 Q9Y2A7 NCKAP1 Nck-associated protein 1 yes yes 0 0 1 By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 77.044 77.153 3 0.025385 88691 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 30.844 27.372 46725000 0 0 0 0 911630 4090600 1237300 3255800 1534200 3304700 4073200 4336200 3182700 4497100 16301000 53347 5094 47898 447966;447967;447968;447969;447970;447971;447972;447973;447974;447975;447976 354201 354201 1 TSFEDGSGECEVFCK Unmodified 1750.6815 0.68145092 686 O95757 HSPA4L Heat shock 70 kDa protein 4L yes yes 0 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 1 3 60.357 54.163 2 8.7009E-45 70318 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 156.71 154.2 327280000 8298700 318980000 0 0 0 0 0 0 0 0 0 0 0 0 0 53348 686 47899 447977;447978;447979;447980 354202;354203;354204;354205 354203 4 TSFEIAELK Unmodified 1036.5441 0.54407645 673 O95619 YEATS4 YEATS domain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.584 69.659 2 0.0037946 79761 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 111.95 46.695 333920000 0 0 0 18454000 24075000 24258000 25204000 22016000 20610000 37059000 28661000 44177000 26570000 22292000 40546000 53349 673 47900 447981;447982;447983;447984;447985;447986;447987;447988;447989;447990;447991;447992 354206;354207;354208;354209;354210;354211;354212;354213;354214;354215;354216;354217 354214 12 TSFFLGEVGNAAK Unmodified 1339.6772 0.67721588 2680 Q49A26 GLYR1 Putative oxidoreductase GLYR1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching 8 3.46 2 6 1 1 1 1 1 1 1 1 78.437 77.219 2 0.0021225 98591 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.882 46.589 53859000 20821000 0 2649200 0 0 0 2433200 4888700 4996000 0 0 7322900 4888900 5859300 0 53350 2680 47901 447993;447994;447995;447996;447997;447998;447999;448000 354218;354219;354220 354218 3 TSFFQALGITTK Unmodified 1312.7027 0.70270235 808 P05388;Q8NHW5 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 88.28 87.795 2 3.1006E-14 111501 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 134.57 114.05 176160000 30192000 366570 0 1774700 4941500 8585800 4750700 10289000 6486500 18498000 12298000 13232000 9409700 12643000 42691000 53351 808 47902 448001;448002;448003;448004;448005;448006;448007;448008;448009;448010;448011;448012;448013;448014;448015 354221;354222;354223;354224;354225;354226;354227;354228;354229;354230;354231;354232;354233;354234;354235 354227 15 TSFLDDAFRK Unmodified 1198.5982 0.59823728 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 65.199 65.287 2;3 0.0035648 73814 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.02 92.889 523090000 0 0 0 28431000 16233000 52796000 32510000 32909000 34837000 37922000 38955000 68473000 43555000 53955000 82519000 53352 2392 47903 448016;448017;448018;448019;448020;448021;448022;448023;448024;448025;448026;448027;448028;448029;448030;448031;448032;448033;448034;448035;448036;448037;448038;448039 354236;354237;354238;354239;354240;354241;354242;354243;354244;354245;354246;354247;354248;354249;354250;354251;354252;354253 354241 7 TSFLLNLR Unmodified 962.55492 0.5549159 121 O00159 MYO1C Unconventional myosin-Ic yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 79.639 79.714 2 0.025168 92189 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 58.917 43.281 26478000 0 0 0 1172400 0 5271200 1708400 2147800 1832000 2535900 3553800 2973300 2274600 3008900 0 53353 121 47904 448040;448041;448042;448043;448044;448045;448046;448047;448048;448049 354254;354255 354254 2 TSFNLLPQPSSIVLEEDHK Unmodified 2153.1004 0.10044891 2912 Q6NZY4 ZCCHC8 Zinc finger CCHC domain-containing protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 6 4 3 3 1 1 1 1 1 1 87.642 86.266 3 1.3799E-13 108095 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.04 86.62 64963000 0 46205000 6858300 0 0 0 0 0 0 2914800 2532700 0 0 0 6452400 53354 2912 47905 448050;448051;448052;448053;448054;448055 354256;354257;354258;354259;354260 354257 5 TSFPEDTVITYK Unmodified 1399.6871 0.68711187 859 P08174 CD55 Complement decay-accelerating factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.14 70.215 2 0.0012985 80343 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.862 64.265 429880000 0 0 0 16267000 24478000 39412000 27162000 24229000 29746000 36048000 39266000 63296000 41031000 36432000 52517000 53355 859 47906 448056;448057;448058;448059;448060;448061;448062;448063;448064;448065;448066;448067 354261;354262;354263;354264;354265;354266;354267;354268;354269;354270;354271;354272;354273 354265 12 TSFPLSESQTLLSSAPVPK Unmodified 1988.0466 0.046622427 2675 Q3T8J9 GON4L GON-4-like protein no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 87.368 87.469 2 0.00016189 101434 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 70.332 65.053 28804000 0 0 0 0 2043900 2135300 0 1741000 1831600 5865100 3166600 3235500 1026900 2553100 5205100 53356 2675 47907 448068;448069;448070;448071;448072;448073;448074;448075;448076;448077 354274;354275;354276;354277;354278;354279;354280 354275 7 TSFQMAGEWLK Oxidation (M) 1312.6122 0.61217279 4491 Q9HAV4 XPO5 Exportin-5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 76.599 71.328 2 0.00039331 92063 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 106.2 96.418 51199000 16825000 29618000 4755900 0 0 0 0 0 0 0 0 0 0 0 0 53357 4491 47908 448078;448079;448080 354281;354282 354282 5930 2 TSFQMAGEWLK Unmodified 1296.6173 0.61725816 4491 Q9HAV4 XPO5 Exportin-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 85.031 79.908 2 0.00016263 100594 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.85 98.43 234460000 90469000 138890000 5094000 0 0 0 0 0 0 0 0 0 0 0 0 53358 4491 47908 448081;448082;448083 354283;354284;354285 354283 3 TSFSPCVPQCQTQGSYGSFTEQHR Unmodified 2788.197 0.19696162 2781 Q5T749 KPRP Keratinocyte proline-rich protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 65.618 65.483 3 7.4561E-28 75504 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 96.708 93.61 102880000 0 0 0 84693000 0 0 8794200 0 0 0 0 0 9387900 0 0 53359 2781 47909 448084;448085;448086 354286;354287;354288 354288 3 TSFSQEQSCDSAGEGSER Unmodified 1960.7705 0.77047693 3248 Q8IWW6 ARHGAP12 Rho GTPase-activating protein 12 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 23.726 23.848 2 0.0029116 24346 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.113 40.113 4733200 0 0 0 0 842880 0 1004700 0 0 786580 0 0 0 0 2099100 53360 3248 47910 448087;448088;448089;448090 354289 354289 1 TSFSSVTVSR Unmodified 1069.5404 0.54038805 96 CON__Q5XKE5;Q5XKE5 KRT79 Keratin, type II cytoskeletal 79 yes no 0 0 0 By MS/MS 10 0 1 1 41.294 40.778 2 0.009563 45942 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 57.55 42.883 + 11313000 0 0 0 11313000 0 0 0 0 0 0 0 0 0 0 0 53361 96 47911 448091 354290 354290 1 TSFTSVSR Unmodified 883.43995 0.43994572 74 CON__P13647;P13647 KRT5 Keratin, type II cytoskeletal 5 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 25.131 25.334 2 6.0523E-08 26981 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 163.67 133.48 + 1696900000 0 0 0 497670000 94296000 70895000 91522000 301170000 42302000 102660000 64217000 85064000 237600000 66220000 43280000 53362 74 47912 448092;448093;448094;448095;448096;448097;448098;448099;448100;448101;448102;448103 354291;354292;354293;354294;354295;354296;354297;354298;354299;354300;354301;354302 354301 12 TSFVNFTDICK Unmodified 1330.6227 0.62273747 1099 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 0 0 0 By MS/MS 2 0 1 1 82.187 77.482 2 0.0051087 96219 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.282 53.501 103560000 0 103560000 0 0 0 0 0 0 0 0 0 0 0 0 0 53363 1099 47913 448104 354303 354303 1 TSGADGLVGEDGAADASK Unmodified 1619.7275 0.72747313 4999 Q9ULL5 PRR12 Proline-rich protein 12 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 2 36.66 36.907 2 1.4123E-29 39200 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 113.53 97.663 74739000 0 0 0 0 5679300 6208500 0 0 0 8825900 0 0 0 7453500 46572000 53364 4999 47914 448105;448106;448107;448108;448109;448110;448111 354304;354305;354306;354307 354307 4 TSGAFVYDCSK Unmodified 1233.5336 0.53358811 2212 Q12948 FOXC1 Forkhead box protein C1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 38.163 38.427 2 0.0077544 42545 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 53.237 41.747 55863000 0 0 0 0 4531300 0 4314200 4739100 4416300 4680800 5451900 8158000 6248700 5476200 7846400 53365 2212 47915 448112;448113;448114;448115;448116;448117;448118;448119;448120;448121 354308;354309;354310;354311;354312;354313;354314 354309 7 TSGDTLELMEESLDINLLNNAIRLK Unmodified 2801.4481 0.44807416 2184 Q12769 NUP160 Nuclear pore complex protein Nup160 yes yes 0 0 1 By MS/MS 2 0 1 1 101.19 93.063 3 1.2114E-30 119842 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.18 97.818 7592100 7592100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53366 2184 47916 448122 354315 354315 1 TSGELFAQAPVDQFPGTAVESVTDSSR Unmodified 2795.325 0.32498213 4688 Q9NVZ3 NECAP2 Adaptin ear-binding coat-associated protein 2 yes yes 0 0 0 By MS/MS 10 0 1 1 88.035 88.145 3 0.043437 102121 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 16.938 10.362 4865200 0 0 0 0 0 0 0 0 0 4865200 0 0 0 0 0 53367 4688 47917 448123 354316 354316 1 TSGETTQTHTEPTGDSK Unmodified 1775.781 0.78096527 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 6.8751 6.9957 3 0.00016304 5332 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.454 59.906 69395000 0 0 0 2899700 4302100 4629100 4528600 0 5736600 7689100 10037000 5235800 7445100 7206700 9685000 53368 1492 47918 448124;448125;448126;448127;448128;448129;448130;448131;448132;448133;448134 354317;354318;354319;354320 354320 1 TSGGDHAPDSPSGENSPAPQGR Unmodified 2119.9155 0.91550169 3940 Q96NY9 MUS81 Crossover junction endonuclease MUS81 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 19.685 19.904 3 1.2356E-05 20523 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 50.425 46.692 34146000 0 0 0 3195700 2917800 2648000 2050800 0 0 0 3603900 5393300 5175700 3764600 5395900 53369 3940 47919 448135;448136;448137;448138;448139;448140;448141;448142;448143 354321;354322;354323;354324;354325;354326;354327;354328 354326 8 TSGGLLSEAPNEK Unmodified 1301.6463 0.64630969 4776 Q9NZM5 GLTSCR2 Glioma tumor suppressor candidate region gene 2 protein yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 42.911 43.262 2 1.2131E-06 48041 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 117.02 91.784 88661000 0 0 0 10010000 0 0 0 0 0 0 19933000 18331000 24415000 0 15972000 53370 4776 47920 448144;448145;448146;448147;448148 354329;354330;354331 354330 3 TSGGMTDPEK Unmodified 1021.4386 0.4386251 3204 Q86Y56 DNAAF5 Dynein assembly factor 5, axonemal yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 10.988 11.102 2 0.010746 9558 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.461 42.634 40485000 0 0 0 2632000 2510600 4238100 2794500 2787500 2317100 4719200 0 5783500 3028700 3230900 6442800 53371 3204 47921 448149;448150;448151;448152;448153;448154;448155;448156;448157;448158;448159 354332;354333 354333 2 TSGLPANPSPGPAPQATSVK Unmodified 1875.969 0.96904081 4823 Q9P2N6 KANSL3 KAT8 regulatory NSL complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 51.382 51.48 2 1.0107E-14 58622 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 85.837 73.07 28437000 0 0 0 0 7336200 0 6469300 7015200 0 0 0 0 0 0 7616100 53372 4823 47922 448160;448161;448162;448163 354334;354335;354336;354337 354337 4 TSGMPEICQEYSGTLR Oxidation (M) 1843.808 0.80804841 2075 Q02413 DSG1 Desmoglein-1 yes yes 0 1 0 By MS/MS 10 0 1 1 57.225 56.556 2 0.002477 64934 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 44.299 32.086 3604500 0 0 0 3604500 0 0 0 0 0 0 0 0 0 0 0 53373 2075 47923 448164 354338 354338 3374 1 TSGMPEICQEYSGTLR Unmodified 1827.8131 0.81313379 2075 Q02413 DSG1 Desmoglein-1 yes yes 0 0 0 By MS/MS 10 0 1 1 70.655 70.028 2 0.00039086 81075 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 64.55 58.31 2592400 0 0 0 2592400 0 0 0 0 0 0 0 0 0 0 0 53374 2075 47923 448165 354339 354339 1 TSGMPEICQEYSGTLRR Unmodified 1983.9142 0.91424482 2075 Q02413 DSG1 Desmoglein-1 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 63.042 62.348 3 6.1943E-07 71961 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 80.534 73.125 11072000 0 0 0 11072000 0 0 0 0 0 0 0 0 0 0 0 53375 2075 47924 448166;448167 354340;354341;354342 354342 3 TSGMPEICQEYSGTLRR Oxidation (M) 1999.9092 0.90915944 2075 Q02413 DSG1 Desmoglein-1 yes yes 0 1 1 By MS/MS 10 0 1 1 49.882 49.263 3 0.00022084 56207 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 53.008 43.259 20080000 0 0 0 20080000 0 0 0 0 0 0 0 0 0 0 0 53376 2075 47924 448168 354343 354343 3374 1 TSGNATVDHLSK Unmodified 1228.6048 0.60477922 4014 Q99496 RNF2 E3 ubiquitin-protein ligase RING2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.96 2.69 3 20 1 2 1 2 1 1 1 2 2 2 2 2 2 2 15.37 15.011 2;3 0.00023068 19496 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.171 87.708 283880000 8424100 110110000 0 11663000 9459100 1422200 3253200 8045500 9810100 16339000 23928000 18820000 21496000 19096000 22008000 53377 4014 47925 448169;448170;448171;448172;448173;448174;448175;448176;448177;448178;448179;448180;448181;448182;448183;448184;448185;448186;448187;448188;448189;448190;448191 354344;354345;354346;354347;354348;354349;354350 354344 5 TSGPLSPPTGPPGPAPAGPAVR Unmodified 1980.0429 0.042874453 1602 P49815 TSC2 Tuberin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 2 1 1 2 2 1 1 1 69.79 69.789 2;3 0.00020764 80278 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 50.563 37.795 32715000 0 0 0 1548300 5044300 3487100 2180100 4907000 0 6344400 3845600 0 3244600 0 2113800 53378 1602 47926 448192;448193;448194;448195;448196;448197;448198;448199;448200;448201;448202;448203 354351;354352;354353 354352 3 TSGQTFANSNSSR Unmodified 1355.6066 0.60657014 4043 Q99661 KIF2C Kinesin-like protein KIF2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching 10 0 15 1 1 1 2 1 1 2 1 1 1 1 2 12.629 12.789 2 1.9463E-106 12204 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 207.67 185.43 164650000 0 0 0 14552000 11359000 12355000 15980000 9876400 9298000 14838000 13578000 17042000 15527000 10518000 19731000 53379 4043 47927 448204;448205;448206;448207;448208;448209;448210;448211;448212;448213;448214;448215;448216;448217;448218 354354;354355;354356;354357;354358;354359;354360;354361;354362 354355 9 TSGRVAVEEVDEEGK Unmodified 1603.7689 0.76894402 757 P02545 LMNA Prelamin-A/C;Lamin-A/C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 2 3 2 35.124 30.335 2;3 1.9314E-37 39942 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.42 119.8 266070000 46077000 104130000 115850000 0 0 0 0 0 0 0 0 0 0 0 0 53380 757 47928 448219;448220;448221;448222;448223;448224;448225 354363;354364;354365;354366 354363 2 TSGTEPADFALPSSR Unmodified 1534.7264 0.72635092 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 62.931 63.098 2 7.601E-23 71538 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 120.03 93.916 141870000 0 0 0 0 4919600 8956300 9444700 7883100 5674000 14200000 13478000 16260000 14492000 17555000 29010000 53381 2203 47929 448226;448227;448228;448229;448230;448231;448232;448233;448234;448235;448236 354367;354368;354369;354370;354371;354372;354373;354374 354370 2 TSGTEPADFALPSSRGGPGK Unmodified 1930.9385 0.93846896 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 62.269 56.283 3 0.02095 75618 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 27.678 17.301 28180000 3534300 18951000 5694300 0 0 0 0 0 0 0 0 0 0 0 0 53382 2203 47930 448237;448238;448239 354375;354376;354377 354376 3 TSGVPGNRPGSVIR Unmodified 1395.7583 0.75826017 391 O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 30.48 30.558 3 0.00021592 32734 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 78.486 66.953 120600000 0 0 0 8913900 6539300 16180000 9743700 9824200 9285900 0 23216000 0 18104000 18792000 0 53383 391 47931 448240;448241;448242;448243;448244;448245;448246;448247;448248 354378;354379;354380;354381;354382;354383;354384;354385;354386;354387 354381 8 TSGVPSGFNFTAPPVLGK Unmodified 1774.9254 0.92538508 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 2 2 1 2 1 2 2 2 2 1 2 86.468 86.544 2;3 8.2049E-15 100628 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 122.39 122.39 518280000 0 0 0 9392400 27859000 41154000 30908000 50132000 33856000 52613000 45203000 65016000 29788000 41513000 90849000 53384 1364 47932 448249;448250;448251;448252;448253;448254;448255;448256;448257;448258;448259;448260;448261;448262;448263;448264;448265;448266;448267;448268 354388;354389;354390;354391;354392;354393;354394;354395;354396;354397;354398;354399;354400;354401;354402;354403;354404;354405;354406 354402 18 TSHGPQVAVPVPGPQVK Unmodified 1696.9261 0.92605378 4551 Q9NPG3 UBN1 Ubinuclein-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.824 58.937 3 0.021236 66950 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 28.549 22.141 53556000 0 0 0 3112200 2240000 4938100 4121400 3065200 3207300 4184200 5590900 4862500 4167600 4113000 9953400 53385 4551 47933 448269;448270;448271;448272;448273;448274;448275;448276;448277;448278;448279;448280 354407;354408 354407 2 TSHILSLQK Unmodified 1025.5869 0.58694431 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 8.86 2.8 1 6 1 1 1 1 1 1 1 35.455 34.767 2 0.019961 51548 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.825 57.789 33221000 8945900 0 0 0 0 0 4924900 3237600 0 0 5336800 0 3976500 4811200 1988000 53386 2446 47934 448281;448282;448283;448284;448285;448286;448287 354409;354410 354410 2 TSHLAALLK Unmodified 952.57057 0.57056597 3941 Q96P11 NSUN5 Probable 28S rRNA (cytosine-C(5))-methyltransferase no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.878 47.044 2 0.0031269 51794 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 91.064 52.826 114600000 0 0 0 7221300 7801800 13208000 5851600 7591900 5103600 13660000 10676000 12712000 9203700 8035100 13531000 53387 3941 47935 448288;448289;448290;448291;448292;448293;448294;448295;448296;448297;448298;448299 354411;354412;354413;354414;354415;354416;354417;354418;354419;354420;354421;354422 354420 12 TSHLSDTGISALVEIPK Unmodified 1766.9414 0.94142907 4484 Q9HAD4 WDR41 WD repeat-containing protein 41 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 85.727 80.6 3 2.2917E-05 101752 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.866 78.595 81211000 15603000 59030000 6577500 0 0 0 0 0 0 0 0 0 0 0 0 53388 4484 47936 448300;448301;448302 354423;354424;354425 354423 2 TSHPETDILHR Unmodified 1304.6473 0.64731274 4999 Q9ULL5 PRR12 Proline-rich protein 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 28.775 28.979 3 0.0044718 30308 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 44.299 34.653 37180000 0 0 0 0 0 6193500 0 0 0 5915400 0 0 11374000 13697000 0 53389 4999 47937 448303;448304;448305;448306;448307 354426;354427;354428 354427 3 TSHYLTPQSNHLSLSK Unmodified 1811.9166 0.91661131 2966 Q6R327 RICTOR Rapamycin-insensitive companion of mTOR yes yes 0 0 0 By MS/MS 2 0 2 2 55.318 47.21 3;4 0.0022044 64552 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.828 41.913 54373000 54373000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53390 2966 47938 448308;448309 354429;354430 354429 1 TSIAIDTIINQK Unmodified 1315.7347 0.73473076 1192 P25705 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching 7.91 3.42 2 1 8 2 1 1 1 1 1 1 1 1 1 77.291 76.332 2 2.7773E-05 94479 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 143.21 121.13 274380000 0 186460000 4346200 4777700 8237900 0 0 8191800 0 13752000 0 17046000 8182600 10855000 12536000 53391 1192 47939 448310;448311;448312;448313;448314;448315;448316;448317;448318;448319;448320 354431;354432;354433;354434;354435;354436;354437;354438 354432 5 TSIDAYDNFDNISLAQRLEK Unmodified 2312.1285 0.12845458 2040 Q00610 CLTC Clathrin heavy chain 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.186 82.247 3 1.3788E-11 94741 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.063 74.463 144090000 0 0 0 3390300 5492800 8066700 4151600 19973000 7069500 22610000 10576000 12959000 6101700 18459000 25236000 53392 2040 47940 448321;448322;448323;448324;448325;448326;448327;448328;448329;448330;448331;448332 354439;354440;354441 354440 3 TSIEQEALQEK Unmodified 1274.6354 0.63541065 2741 Q5JTW2 CEP78 Centrosomal protein of 78 kDa yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 46.448 46.628 2 0.00036489 51444 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 87.806 52.369 48743000 0 0 0 2759200 2772600 4930900 0 0 0 4650500 3727200 9166500 4650700 3915300 12170000 53393 2741 47941 448333;448334;448335;448336;448337;448338;448339;448340;448341;448342 354442;354443;354444;354445;354446 354444 5 TSILAAANPISGHYDR Unmodified 1684.8533 0.85328277 2415 Q14566 MCM6 DNA replication licensing factor MCM6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 1 2 2 1 2 2 2 2 2 2 2 68.991 69.126 2;3 0.00045454 79237 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 59.261 54.945 290070000 0 0 0 5727500 5408300 24845000 13438000 16274000 11984000 18390000 23447000 33759000 13916000 23098000 99781000 53394 2415 47942 448343;448344;448345;448346;448347;448348;448349;448350;448351;448352;448353;448354;448355;448356;448357;448358;448359;448360;448361;448362;448363 354447;354448;354449;354450;354451;354452;354453;354454;354455;354456;354457;354458;354459 354453 12 TSILAVSDVSSSK Unmodified 1292.6824 0.68236084 2456 Q14966 ZNF638 Zinc finger protein 638 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 57.732 57.858 2 0.01122 65954 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 42.809 23.023 54173000 0 0 0 0 4463600 0 7953200 4367800 8440800 6985900 0 0 0 8518200 13444000 53395 2456 47943 448364;448365;448366;448367;448368;448369;448370 354460;354461 354460 2 TSILAVSDVSSSKPSIK Unmodified 1717.9462 0.9461801 2456 Q14966 ZNF638 Zinc finger protein 638 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 65.154 64.143 3 0.0026992 73537 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 42.382 29.827 56414000 10863000 0 1368500 2286100 3387200 0 5683700 3817200 0 6050600 5260700 7205300 0 3692300 6799000 53396 2456 47944 448371;448372;448373;448374;448375;448376;448377;448378;448379;448380;448381 354462;354463;354464 354464 3 TSIPNAASEEGDEDDWASNK Unmodified 2134.8927 0.89270056 1275 P30291 WEE1 Wee1-like protein kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 55.991 56.026 2 0.00013383 63507 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 50.843 45.86 21264000 0 0 0 3883600 0 2859100 2413000 3314800 0 4037000 4756500 0 0 0 0 53397 1275 47945 448382;448383;448384;448385;448386;448387 354465;354466;354467 354466 3 TSIQIDLEK Unmodified 1045.5655 0.56554017 227 O14920 IKBKB Inhibitor of nuclear factor kappa-B kinase subunit beta yes yes 0 0 0 By MS/MS 2 0 1 1 64.16 58.252 2 0.016282 74619 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.219 45.966 42206000 0 42206000 0 0 0 0 0 0 0 0 0 0 0 0 0 53398 227 47946 448388 354468 354468 1 TSISSQYVIR Unmodified 1152.6139 0.61388734 3390 Q8NBA8 DTWD2 DTW domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 50.356 50.335 2 0.0031947 56916 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 88.948 55.151 42536000 0 0 0 0 7026800 0 9723100 15446000 0 0 0 0 0 10340000 0 53399 3390 47947 448389;448390;448391;448392;448393 354469;354470;354471;354472 354470 4 TSIVQAAAGGVPGGGSNNGK Unmodified 1740.8755 0.87547477 4585 Q9NR12 PDLIM7 PDZ and LIM domain protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 51.53 52.088 2 1.191E-27 57951 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.943 81.576 14654000 0 0 0 0 0 0 0 0 0 0 5842200 0 0 0 8811700 53400 4585 47948 448394;448395;448396;448397 354473;354474;354475;354476 354473 4 TSLAALEQIQTAK Unmodified 1372.7562 0.75619449 2689 Q4V328 GRIPAP1 GRIP1-associated protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 71.141 71.356 2 5.3836E-08 82444 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 102.42 87.272 63815000 0 0 0 0 0 0 5423000 4812400 2490200 7031300 8010900 9396100 5589000 6913800 14148000 53401 2689 47949 448398;448399;448400;448401;448402;448403;448404;448405;448406 354477;354478;354479;354480;354481;354482;354483;354484 354483 8 TSLADSSIFDSK Unmodified 1269.6089 0.60886155 4455 Q9H8V3 ECT2 Protein ECT2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 64.06 63.871 2 0.00032444 74098 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 97.734 89.27 73729000 0 0 0 16726000 12445000 16064000 17682000 0 10812000 0 0 0 0 0 0 53402 4455 47950 448407;448408;448409;448410;448411 354485 354485 1 TSLAGDTSNSSSPASTGAK Unmodified 1737.8017 0.80170071 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.708 22.96 2 1.7564E-24 23916 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 115.78 107.48 55727000 0 0 0 4153700 0 5179600 3590200 3435500 2761700 6634000 6298400 8829800 4516100 4407400 5920600 53403 5049 47951 448412;448413;448414;448415;448416;448417;448418;448419;448420;448421;448422;448423 354486;354487;354488;354489;354490;354491;354492;354493;354494;354495;354496;354497 354487 12 TSLALDESLFR Unmodified 1250.6507 0.65066678 3140 Q86U42 PABPN1 Polyadenylate-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.941 82.002 2 1.0396E-05 94479 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 138.66 117.2 130030000 0 0 0 3033900 6701900 12034000 6805200 7547000 9212200 14407000 12846000 14513000 7413100 11044000 24467000 53404 3140 47952 448424;448425;448426;448427;448428;448429;448430;448431;448432;448433;448434;448435 354498;354499;354500;354501;354502;354503;354504;354505;354506;354507;354508;354509;354510 354502 13 TSLAPYVK Unmodified 877.49092 0.49091866 1582 P49642 PRIM1 DNA primase small subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44.279 43.748 2 0.015258 56432 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.262 58.076 996310000 0 782940000 8766000 10621000 8396800 10182000 13210000 9315500 11758000 17938000 26228000 29423000 18829000 15206000 33495000 53405 1582 47953 448436;448437;448438;448439;448440;448441;448442;448443;448444;448445;448446;448447;448448;448449 354511;354512;354513;354514;354515;354516;354517 354512 7 TSLAQHFTAGPGR Unmodified 1341.6789 0.67894722 3291 Q8IZ69 TRMT2A tRNA (uracil-5-)-methyltransferase homolog A yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 40.714 40.893 3 0.00061458 45786 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 67.275 53.559 100370000 0 0 0 5338300 6243500 10056000 7041300 10145000 4974800 0 9103800 13495000 11372000 7730100 14872000 53406 3291 47954 448450;448451;448452;448453;448454;448455;448456;448457;448458;448459;448460 354518;354519;354520;354521 354518 4 TSLATILDGGEENLEK Unmodified 1688.8469 0.84685999 3258 Q8IXH7 NELFCD Negative elongation factor C/D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 82.889 82.995 2 7.7378E-28 95634 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 172.13 155.75 123380000 0 0 0 0 5970500 0 5431100 8967900 0 15243000 16748000 12287000 9828200 14268000 34634000 53407 3258 47955 448461;448462;448463;448464;448465;448466;448467;448468;448469 354522;354523;354524;354525;354526;354527 354522 6 TSLDPSLEIYKK Unmodified 1392.75 0.75004648 4414 Q9H6E4 CCDC134 Coiled-coil domain-containing protein 134 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 59.897 59.954 3 0.0051648 68137 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 39.561 32.196 39258000 0 0 0 3293200 3010900 0 4470600 3517500 0 4470600 5592900 6785500 4928700 3187700 0 53408 4414 47956 448470;448471;448472;448473;448474;448475;448476;448477;448478;448479 354528;354529;354530;354531;354532 354532 5 TSLDVSNSAEPGFLAPGAR Unmodified 1887.9327 0.9326553 3432 Q8NEY1 NAV1 Neuron navigator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.689 75.75 2 1.6367E-41 87007 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 153.38 138.5 145900000 0 0 0 7638400 8209100 13119000 12687000 10260000 9466600 11945000 15088000 20142000 11249000 10091000 16000000 53409 3432 47957 448480;448481;448482;448483;448484;448485;448486;448487;448488;448489;448490;448491 354533;354534;354535;354536;354537;354538;354539;354540;354541;354542;354543;354544 354536 12 TSLEASMEASPK Oxidation (M) 1265.5809 0.58093224 3238 Q8IWC1 MAP7D3 MAP7 domain-containing protein 3 yes yes 0 1 0 By MS/MS 2 0 1 1 24.711 20.583 2 0.019195 27225 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 53.517 27.133 5750100 0 5750100 0 0 0 0 0 0 0 0 0 0 0 0 0 53410 3238 47958 448492 354545 354545 4849 1 TSLEHLVTK Unmodified 1026.571 0.5709599 4621 Q9NS87 KIF15 Kinesin-like protein KIF15 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 43.988 38.658 2 0.0015214 53089 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 135.71 85.008 126940000 84510000 0 42434000 0 0 0 0 0 0 0 0 0 0 0 0 53411 4621 47959 448493;448494 354546 354546 1 TSLETQK Unmodified 805.41815 0.41814765 3180 Q86W92 PPFIBP1 Liprin-beta-1 no no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 6.9807 7.1182 2 0.023433 5068 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 85.359 37.617 16014000 0 0 0 0 1812100 3258500 0 3254100 3655700 0 2489600 0 0 0 1543600 53412 3180 47960 448495;448496;448497;448498;448499;448500 354547 354547 1 TSLEVPEINALLLVPK Unmodified 1735.0131 0.013137454 3177 Q86W42 THOC6 THO complex subunit 6 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 96.988 97.15 2 0.0036644 112851 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.353 32.775 13819000 0 0 0 0 0 0 0 837390 0 4471200 2361100 0 0 0 6149000 53413 3177 47961 448501;448502;448503;448504 354548 354548 1 TSLEVSLLEK Unmodified 1117.6231 0.62305505 663 O95456 PSMG1 Proteasome assembly chaperone 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 78.405 73.661 2 0.0075469 92720 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.974 26.006 564430000 28750000 521790000 13887000 0 0 0 0 0 0 0 0 0 0 0 0 53414 663 47962 448505;448506;448507;448508 354549;354550;354551;354552 354549 4 TSLFEEDEEDDLFAIAK Unmodified 1970.8997 0.89968342 2840 Q641Q2 FAM21A WASH complex subunit FAM21A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 93.964 89.285 2 5.4247E-19 111831 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.87 103.11 58057000 36037000 19147000 2873000 0 0 0 0 0 0 0 0 0 0 0 0 53415 2840 47963 448509;448510;448511;448512 354553;354554;354555;354556 354553 4 TSLFEEDKEDDLFAIAK Unmodified 1969.9521 0.95205334 5195 Q9Y4E1 FAM21C WASH complex subunit FAM21C yes yes 0 0 1 By MS/MS 2 0 1 1 90.079 81.949 3 0.00022084 106401 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.54 76.449 24003000 24003000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53416 5195 47964 448513 354557 354557 1 TSLGNVVLLLK Unmodified 1155.7227 0.72270951 384 O60231 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 88.177 88.257 2 0.00061391 102336 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 79.474 65.267 49343000 0 0 0 855670 0 3331800 2651200 3631200 0 8928500 7348200 0 2347000 3729000 16521000 53417 384 47965 448514;448515;448516;448517;448518;448519;448520;448521;448522 354558;354559;354560;354561;354562;354563;354564 354559 7 TSLGPNGLDK Unmodified 1000.5189 0.51892433 1548 P48643 CCT5 T-complex protein 1 subunit epsilon yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 35.395 34.798 2 0.0078444 37203 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 61.48 3.5202 1660300000 0 373380000 2110200 72967000 0 156920000 96282000 82244000 81549000 159480000 0 199390000 0 157390000 278620000 53418 1548 47966 448523;448524;448525;448526;448527;448528;448529;448530;448531;448532;448533 354565;354566;354567;354568;354569;354570;354571;354572;354573;354574 354572 10 TSLGQSMSK Unmodified 937.45388 0.45388123 396 O60333 KIF1B Kinesin-like protein KIF1B yes yes 0 0 0 By MS/MS 2 0 1 1 19.813 16.238 2 0.036084 21364 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.31 104.16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53419 396 47967 448534 354575 354575 1 TSLIGMFDSDVNK Oxidation (M) 1441.6759 0.67589525 1739 P54278 PMS2 Mismatch repair endonuclease PMS2 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 74.717 74.183 2 0.00038653 85465 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 76.927 66.47 121980000 0 26847000 4269700 0 6798700 8791200 9607600 16372000 7052900 9006600 8597800 0 8359000 5944100 10331000 53420 1739 47968 448535;448536;448537;448538;448539;448540;448541;448542;448543;448544;448545;448546;448547 354576;354577;354578;354579;354580;354581;354582;354583;354584;354585;354586;354587 354577 2821 12 TSLIMNPHASTNGQLSVHTPK Unmodified 2232.1321 0.13210017 4377 Q9H334 FOXP1 Forkhead box protein P1 yes yes 0 0 0 By MS/MS 2 0 1 1 68.53 60.235 4 0.013521 80586 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 28.65 13.396 7736100 7736100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53421 4377 47969 448548 354588 354588 0 TSLLHIAR Unmodified 909.5396 0.53960019 2830 Q5VZ89 DENND4C DENN domain-containing protein 4C yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 42.55 42.791 2 0.01743 47846 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 65.676 45.018 89959000 0 0 0 0 1397300 7147700 7446400 8577900 7556200 8455900 11066000 10704000 8701100 7913700 10994000 53422 2830 47970 448549;448550;448551;448552;448553;448554;448555;448556;448557;448558;448559 354589;354590;354591;354592;354593;354594 354593 6 TSLLNTQPPR Unmodified 1125.6142 0.6142217 3094 Q7Z460 CLASP1 CLIP-associating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 46.124 46.366 2 0.00050563 52130 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 125.31 98.06 86017000 0 0 0 0 7600600 8939300 8218900 0 6508200 10045000 10587000 9582700 13100000 0 11436000 53423 3094 47971 448560;448561;448562;448563;448564;448565;448566;448567;448568;448569;448570 354595;354596;354597;354598;354599;354600;354601;354602;354603;354604;354605;354606;354607;354608;354609 354607 13 TSLLPIDETNPDLEEK Unmodified 1812.8993 0.89928949 2986 Q6VMQ6 ATF7IP Activating transcription factor 7-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 79.162 78.586 2 1.5512E-27 90613 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 132.5 93.72 304460000 0 155640000 0 6904200 12919000 14550000 13121000 11122000 0 14791000 12745000 14486000 16290000 11926000 19959000 53424 2986 47972 448571;448572;448573;448574;448575;448576;448577;448578;448579;448580;448581;448582;448583;448584 354610;354611;354612;354613;354614;354615;354616;354617;354618;354619;354620;354621;354622;354623 354614 14 TSLMNQYVNK Oxidation (M) 1212.5809 0.58087266 1647 P51149 RAB7A Ras-related protein Rab-7a yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.72 2 13 1 1 1 1 1 1 2 1 1 1 1 1 1 1 30.17 29.616 2 0.00011585 39072 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 134.48 104.31 500400000 33184000 34440000 0 15053000 14191000 14599000 21855000 143450000 18344000 24710000 42573000 43270000 34286000 25133000 35313000 53425 1647 47973 448585;448586;448587;448588;448589;448590;448591;448592;448593;448594;448595;448596;448597;448598;448599 354624;354625;354626;354627;354628;354629;354630;354631;354632;354633;354634;354635;354636;354637;354638 354630 2659 14 TSLMNQYVNK Unmodified 1196.586 0.58595803 1647 P51149 RAB7A Ras-related protein Rab-7a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 48.418 46.992 2 4.5584E-12 53331 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 163.99 125.02 1114000000 133880000 170320000 2307800 45642000 45970000 60263000 63402000 78530000 43525000 84280000 110730000 110950000 91499000 72744000 0 53426 1647 47973 448600;448601;448602;448603;448604;448605;448606;448607;448608;448609;448610;448611;448612;448613;448614 354639;354640;354641;354642;354643;354644;354645;354646;354647;354648;354649;354650;354651;354652;354653 354640 9 TSLMNQYVNKK Unmodified 1324.6809 0.68092105 1647 P51149 RAB7A Ras-related protein Rab-7a yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 37.778 37.949 3 0.0037137 42009 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 48.44 35.04 64646000 0 0 0 5020900 6557900 1254800 7350500 11804000 0 0 10065000 9222200 0 5539100 7832200 53427 1647 47974 448615;448616;448617;448618;448619;448620;448621;448622;448623 354654;354655;354656;354657 354654 3 TSLNILIK Unmodified 900.56442 0.56441796 2995 Q6YHK3 CD109 CD109 antigen yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 70.573 70.71 2 0.022922 80368 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.76 32.653 45280000 0 0 0 0 2177700 3990100 2765900 3243500 3250600 4660000 4716200 6031700 3085800 4230800 7127800 53428 2995 47975 448624;448625;448626;448627;448628;448629;448630;448631;448632;448633;448634 354658;354659;354660 354659 3 TSLNNPYIIR Unmodified 1189.6455 0.64552182 1975 P78345 RPP38 Ribonuclease P protein subunit p38 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.43 60.534 2 0.016551 69992 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 63.673 46.047 78690000 0 0 0 3093000 5351500 6356300 6494700 5727400 5839800 8726400 6374200 9831900 6832600 5464000 8598000 53429 1975 47976 448635;448636;448637;448638;448639;448640;448641;448642;448643;448644;448645;448646 354661;354662 354662 1 TSLPAWSAAMDAGLEAMQK Oxidation (M) 1992.9285 0.9284979 2672 Q3LXA3 DAK Bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase (cyclizing);ATP-dependent dihydroxyacetone kinase;FAD-AMP lyase (cyclizing) yes yes 0 1 0 By MS/MS By MS/MS 2 0 3 2 1 89.431 85.36 2;3 3.4517E-05 106724 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.644 63.401 54505000 0 53187000 1317700 0 0 0 0 0 0 0 0 0 0 0 0 53430 2672 47977 448647;448648;448649 354663;354664 354663 4338 1 TSLPAWSAAMDAGLEAMQK Unmodified 1976.9336 0.93358328 2672 Q3LXA3 DAK Bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase (cyclizing);ATP-dependent dihydroxyacetone kinase;FAD-AMP lyase (cyclizing) yes yes 0 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 3 1 97.169 93.344 3 7.8562E-18 115213 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.72 99.929 118380000 0 116580000 1801900 0 0 0 0 0 0 0 0 0 0 0 0 53431 2672 47977 448650;448651;448652;448653 354665;354666;354667 354665 2 TSLPCIPR Unmodified 942.49569 0.49568646 2406 Q14432 PDE3A cGMP-inhibited 3',5'-cyclic phosphodiesterase A yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 55.203 55.689 2 0.02755 62912 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.281 29.756 27867000 0 0 0 0 0 0 0 0 0 0 0 12004000 0 5972900 9889600 53432 2406 47978 448654;448655;448656 354668 354668 1 TSLPNLFQDK Unmodified 1161.603 0.60298831 3157 Q86UV5 USP48 Ubiquitin carboxyl-terminal hydrolase 48 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching 7.5 3.55 1 1 4 2 1 1 1 1 77.031 75.774 2 0.0062851 94282 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.358 64.918 186400000 0 149630000 0 0 0 8749600 0 0 0 7819300 0 0 0 6397400 13802000 53433 3157 47979 448657;448658;448659;448660;448661;448662 354669;354670;354671 354669 3 TSLPPGLPTQELLQIQASQEK Unmodified 2277.2216 0.22162668 607 O94927 HAUS5 HAUS augmin-like complex subunit 5 yes yes 0 0 0 By MS/MS 2 0 1 1 93.515 88.619 3 2.9257E-10 109889 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.761 60.505 30084000 0 30084000 0 0 0 0 0 0 0 0 0 0 0 0 0 53434 607 47980 448663 354672;354673 354672 2 TSLPWQGLK Unmodified 1028.5655 0.56548059 1551 P48729 CSNK1A1 Casein kinase I isoform alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 73.132 73.178 2 0.0087271 83640 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.787 43.864 95359000 0 0 0 7758100 4669500 7555200 5534300 7569300 0 9165000 14184000 11662000 7056600 0 20206000 53435 1551 47981 448664;448665;448666;448667;448668;448669;448670;448671;448672;448673 354674;354675;354676;354677;354678 354676 5 TSLSALTQLMK Unmodified 1191.6533 0.65330932 125 O00186 STXBP3 Syntaxin-binding protein 3 yes yes 0 0 0 By MS/MS 2 0 1 1 90.592 82.461 2 0.067095 107101 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.579 33.484 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53436 125 47982 448674 354679 354679 1 TSLSANNATLEK Unmodified 1247.6357 0.635745 478 O75330 HMMR Hyaluronan mediated motility receptor yes yes 0 0 0 By MS/MS 10 0 1 1 32.031 32.746 2 0.020132 34780 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.467 27.068 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53437 478 47983 448675 354680 354680 1 TSLSGGTGSGTQGATK Unmodified 1408.6794 0.67940073 3016 Q6ZU65 UBN2 Ubinuclein-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.017 13.173 2 0.00016849 12448 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 72.652 65.757 25205000 0 0 0 1237800 1410300 1686200 1845200 1573500 1799800 2881500 2634900 2539700 2993800 1725100 2877000 53438 3016 47984 448676;448677;448678;448679;448680;448681;448682;448683;448684;448685;448686;448687 354681;354682;354683;354684;354685;354686;354687;354688;354689 354682 9 TSLSLTPDVPEADLSEVDPK Unmodified 2112.0474 0.047410288 4763 Q9NZC9 SMARCAL1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 87.363 82.554 2 0.00022564 102634 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.475 58.677 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53439 4763 47985 448688 354690 354690 1 TSLSMFSK Unmodified 899.44225 0.44225391 428 O60749 SNX2 Sorting nexin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 7 3.87 3 5 1 1 1 1 1 1 1 1 53.967 51.717 2 0.014574 70201 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.531 36.549 413960000 207670000 152490000 9525800 0 7088700 9222500 6681800 7868200 0 13408000 0 0 0 0 0 53440 428 47986 448689;448690;448691;448692;448693;448694;448695;448696 354691;354692;354693;354694;354695 354694 5 TSLTTCFAQETFGK Unmodified 1589.7396 0.73955814 1650 P51157 RAB28 Ras-related protein Rab-28 yes yes 0 0 0 By MS/MS 2 0 1 1 79.634 74.922 2 4.4754E-05 93291 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.42 117.72 38480000 0 38480000 0 0 0 0 0 0 0 0 0 0 0 0 0 53441 1650 47987 448697 354696 354696 1 TSLTVADK Unmodified 833.44945 0.44944778 1695 P52732 KIF11 Kinesin-like protein KIF11 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 24.226 19.623 2 0.021563 26184 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.498 13.155 141700000 8315600 133390000 0 0 0 0 0 0 0 0 0 0 0 0 0 53442 1695 47988 448698;448699 354697 354697 1 TSLVLDPQTGEVRLEEAQSEAPETK Unmodified 2726.361 0.36103329 3309 Q8N196 SIX5 Homeobox protein SIX5 yes yes 0 0 1 By MS/MS By MS/MS 5 3.56 1 1 1 2 1 79.689 77.042 3 6.2539E-18 95560 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.949 78.303 69152000 0 56171000 0 0 0 0 0 0 0 12981000 0 0 0 0 0 53443 3309 47989 448700;448701;448702 354698;354699;354700;354701 354699 4 TSLVPDSRDPQK Unmodified 1341.6888 0.6888432 620 O95081 AGFG2 Arf-GAP domain and FG repeat-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 1 2 2 2 2 2 2 2 2 2 2 2 27.924 28.14 2;3 0.0033105 30580 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 55.98 45.749 660610000 0 0 0 32802000 34333000 49360000 50267000 41906000 43066000 64473000 74297000 53374000 65788000 56509000 94432000 53444 620 47990 448703;448704;448705;448706;448707;448708;448709;448710;448711;448712;448713;448714;448715;448716;448717;448718;448719;448720;448721;448722;448723;448724;448725 354702;354703;354704;354705;354706;354707;354708;354709;354710;354711;354712;354713 354711 7 TSMAEGERK Unmodified 1007.4706 0.47059393 914 P0DPB6 yes yes 0 0 1 By MS/MS 2 0 1 1 5.9831 2.7428 2 0.027287 4785 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.305 54.538 36351000 0 36351000 0 0 0 0 0 0 0 0 0 0 0 0 0 53445 914 47991 448726 354714 354714 1 TSMASLFSFTSPAVK Acetyl (Protein N-term);Oxidation (M) 1630.7913 0.79125936 4053 Q99717 SMAD5 Mothers against decapentaplegic homolog 5 yes yes 1 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 90.812 90.885 2 2.9634E-20 105372 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 110.66 98.085 74059000 0 0 0 3578300 6279000 6102400 5916400 5465300 4221300 7817700 8332400 8127600 6076800 4686300 7455100 53446 4053 47992 448727;448728;448729;448730;448731;448732;448733;448734;448735;448736;448737;448738 354715;354716;354717;354718;354719;354720;354721;354722;354723;354724;354725;354726;354727;354728 354723 5552 14 TSMASLFSFTSPAVK Acetyl (Protein N-term) 1614.7963 0.79634474 4053 Q99717 SMAD5 Mothers against decapentaplegic homolog 5 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 97.81 97.952 2 4.5437E-06 113780 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.156 89.575 15338000 0 0 0 0 0 0 0 1808800 0 3187700 2508400 1895700 701690 763590 4471600 53447 4053 47992 448739;448740;448741;448742;448743;448744;448745 354729;354730;354731;354732;354733;354734;354735 354730 7 TSMCSIQSAPPEPATLK Unmodified 1816.8699 0.86992039 1113 P20810 CAST Calpastatin yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 61.562 61.2 2 1.4003E-25 69258 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 143.42 130.44 199620000 0 43365000 0 4911500 5973200 6420300 9241100 10704000 7744300 9777500 15814000 29116000 10577000 13274000 32699000 53448 1113 47993 448746;448747;448748;448749;448750;448751;448752;448753;448754;448755;448756;448757;448758 354736;354737;354738;354739;354740;354741;354742;354743;354744;354745;354746 354739 11 TSMCSIQSAPPEPATLK Oxidation (M) 1832.8648 0.86483501 1113 P20810 CAST Calpastatin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 51.931 51.476 2 6.3275E-46 64871 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.08 109.78 121620000 0 13979000 0 6556700 6041500 0 13921000 0 6254800 14035000 16148000 19709000 0 10553000 14422000 53449 1113 47993 448759;448760;448761;448762;448763;448764;448765;448766;448767;448768;448769 354747;354748;354749;354750;354751;354752;354753;354754;354755;354756;354757 354749 1603 11 TSMFPSLK Unmodified 909.46299 0.46298935 2582 Q15813 TBCE Tubulin-specific chaperone E yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 64.232 64.453 2 0.033014 73957 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 53.968 30.013 36133000 0 0 0 0 0 4166800 0 2227300 0 5777800 4037800 0 3094400 4913300 11916000 53450 2582 47994 448770;448771;448772;448773;448774;448775;448776 354758;354759 354758 2 TSMFPSLK Oxidation (M) 925.4579 0.45790397 2582 Q15813 TBCE Tubulin-specific chaperone E yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 55.26 48.284 2 0.022461 65454 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.809 38.582 127810000 43064000 84746000 0 0 0 0 0 0 0 0 0 0 0 0 0 53451 2582 47994 448777;448778 354760;354761 354761 2 TSMLSPK Unmodified 762.39458 0.39457544 3961 Q96QK1 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 21.375 21.809 2 0.026237 21473 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.146 47.842 83343000 0 0 0 0 0 0 0 0 2613300 0 15864000 12715000 8418800 13058000 30674000 53452 3961 47995 448779;448780;448781;448782;448783;448784 354762 354762 1 TSMNAHSLSEEADSLK Unmodified 1718.7781 0.77812849 4077 Q99996 AKAP9 A-kinase anchor protein 9 yes yes 0 0 0 By MS/MS 2 0 1 1 58.051 54.225 3 0.045371 67752 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 25.319 12.959 2794900 0 0 2794900 0 0 0 0 0 0 0 0 0 0 0 0 53453 4077 47996 448785 354763 354763 1 TSMNVNEIFMAIAK 2 Oxidation (M) 1599.7637 0.7636644 1104 P20339 RAB5A Ras-related protein Rab-5A yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 84.092 84.174 2 0.00018037 97222 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 67.08 56.708 112840000 0 0 0 0 8844600 13091000 11400000 16078000 0 21308000 18806000 0 11526000 11787000 0 53454 1104 47997 448786;448787;448788;448789;448790;448791;448792;448793 354764;354765;354766;354767;354768 354766 1588;1589 4 TSMNVNEIFMAIAK Unmodified 1567.7738 0.77383516 1104 P20339 RAB5A Ras-related protein Rab-5A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 88.213 88.376 2 0.00010063 102695 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 83.397 1.2257 28194000 0 0 0 0 0 0 2033500 5434400 0 0 0 5614200 0 0 15112000 53455 1104 47997 448794;448795;448796;448797 354769;354770;354771;354772 354772 4 TSMPSGDESIDEK Unmodified 1394.5871 0.58713983 2097 Q03468 ERCC6 DNA excision repair protein ERCC-6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.333 32.52 2 7.0864E-08 35809 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 118.4 101.63 115220000 0 0 0 6895000 6995600 9024700 8441100 6348400 6265500 11533000 13737000 12306000 12027000 8073000 13575000 53456 2097 47998 448798;448799;448800;448801;448802;448803;448804;448805;448806;448807;448808;448809 354773;354774;354775;354776;354777;354778;354779;354780;354781 354773 9 TSMPSGDESIDEK Oxidation (M) 1410.5821 0.58205445 2097 Q03468 ERCC6 DNA excision repair protein ERCC-6 yes yes 0 1 0 By matching By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 18.54 18.777 2 0.0012225 19158 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 61.353 35.415 12178000 0 0 0 0 0 0 2101900 0 1382500 2840500 0 0 2938400 0 2914500 53457 2097 47998 448810;448811;448812;448813;448814 354782;354783 354782 3397 2 TSMTEEYRVPDGMVGLIIGR 2 Oxidation (M) 2255.0926 0.092603116 3690 Q92945 KHSRP Far upstream element-binding protein 2 yes yes 0 2 1 By matching By matching By MS/MS By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 77.77 77.925 3 3.0422E-07 89524 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.784 61.597 63973000 0 0 0 0 0 6104400 0 3928500 7655000 0 0 10641000 0 6648400 28996000 53458 3690 47999 448815;448816;448817;448818;448819;448820 354784 354784 5252;5253 1 TSMTEEYRVPDGMVGLIIGR Oxidation (M) 2239.0977 0.097688494 3690 Q92945 KHSRP Far upstream element-binding protein 2 yes yes 0 1 1 By MS/MS 10 0 1 1 87.061 87.22 3 8.7145E-06 100867 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.512 55.063 3413500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3413500 53459 3690 47999 448821 354785 354785 5252;5253 1 TSMTQSLREVIK Acetyl (Protein N-term) 1433.7548 0.75481428 4554 Q9NPJ3 ACOT13 Acyl-coenzyme A thioesterase 13;Acyl-coenzyme A thioesterase 13, N-terminally processed yes yes 1 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 83.339 78.225 2 8.5732E-08 99616 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 118.9 81.84 57569000 17641000 37250000 2678800 0 0 0 0 0 0 0 0 0 0 0 0 53460 4554 48000 448822;448823;448824 354786;354787;354788 354787 3 TSMTQSLREVIK Acetyl (Protein N-term);Oxidation (M) 1449.7497 0.7497289 4554 Q9NPJ3 ACOT13 Acyl-coenzyme A thioesterase 13;Acyl-coenzyme A thioesterase 13, N-terminally processed yes yes 1 1 1 By MS/MS 2 0 1 1 65.769 59.852 2 0.0076504 76640 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 51.276 17.898 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53461 4554 48000 448825 354789 354789 5963 1 TSNEHLQK Unmodified 955.47231 0.47230849 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS 2 0 1 1 1.2796 -1.9716 2 0.0014627 728 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 154.71 114.13 101120000 0 101120000 0 0 0 0 0 0 0 0 0 0 0 0 0 53462 965 48001 448826 354790;354791;354792;354793 354792 4 TSNEVQYDQR Unmodified 1238.5527 0.55274365 2320 Q13573 SNW1 SNW domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.011 16.187 2 9.7198E-12 15842 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 163.16 150.12 149540000 0 0 0 5335200 6573900 6168200 8276600 7424000 10404000 9671100 18465000 28396000 12108000 14217000 22504000 53463 2320 48002 448827;448828;448829;448830;448831;448832;448833;448834;448835;448836;448837;448838 354794;354795;354796;354797;354798;354799;354800;354801;354802;354803;354804;354805;354806 354799 13 TSNEVTVETDK Unmodified 1221.5725 0.57247604 4616 Q9NRY5 FAM114A2 Protein FAM114A2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 18.918 19.147 2 0.00030193 18310 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.309 73.337 27736000 0 0 0 2414700 0 3789400 1758500 1897300 1836700 3058100 1993800 2763700 3891900 0 4332100 53464 4616 48003 448839;448840;448841;448842;448843;448844;448845;448846;448847;448848 354807;354808;354809;354810;354811;354812;354813;354814;354815 354810 9 TSNEVTVETDKK Unmodified 1349.6674 0.66743906 4616 Q9NRY5 FAM114A2 Protein FAM114A2 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.111 13.267 3 0.0066537 12407 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 40.373 33.171 90541000 0 0 0 5267800 5944500 5654700 6285100 6886900 3568700 10334000 8978500 9239200 12610000 5975500 9795300 53465 4616 48004 448849;448850;448851;448852;448853;448854;448855;448856;448857;448858;448859;448860 354816;354817;354818;354819;354820;354821;354822;354823;354824 354824 3 TSNFVPSSANMQYQGQQMK Unmodified 2144.9619 0.96192329 3823 Q96EV2 RBM33 RNA-binding protein 33 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS 8 3.46 1 3 1 1 1 1 61.781 62.094 2;3 1.5898E-12 77173 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.105 76.547 12769000 0 0 0 0 0 0 0 3346400 0 0 0 0 3037500 0 6385300 53466 3823 48005 448861;448862;448863;448864 354825;354826 354825 2 TSNHVGNGEISPMEPQGTLDITQQDTAK Oxidation (M) 2983.3829 0.38290772 2852 Q68CP9 ARID2 AT-rich interactive domain-containing protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.12 2.32 1 7 1 1 1 1 1 1 1 1 61.551 61.121 3 1.5649E-14 69816 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 52.685 46.59 38810000 0 5197100 0 0 0 4211200 4163900 0 0 6642100 4980100 7007600 0 0 6608300 53467 2852 48006 448865;448866;448867;448868;448869;448870;448871;448872 354827;354828;354829;354830;354831;354832;354833 354831 4509 7 TSNIGLSMEFHGNCK Unmodified 1693.7552 0.75522498 4290 Q9C0E2 XPO4 Exportin-4 yes yes 0 0 0 By MS/MS 2 0 1 1 67.81 59.516 3 0.0075926 79798 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.03 46.229 11954000 11954000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53468 4290 48007 448873 354834 354834 0 TSNIRANFENLAK Unmodified 1476.7685 0.76849051 2399 Q14247 CTTN Src substrate cortactin yes yes 0 0 1 By MS/MS 2 0 1 1 64.498 56.219 3 0.029068 75907 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.483 36.605 48235000 48235000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53469 2399 48008 448874 354835 354835 0 TSNLLLSHAGILK Unmodified 1365.798 0.79799972 1118;5069 P21127;Q9UQ88 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 73 73.116 3 0.0024226 83440 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 51.875 41.549 108450000 0 0 0 0 3227900 14560000 5061100 0 11041000 13375000 11499000 14031000 0 12234000 23426000 53470 1118;5069 48009 448875;448876;448877;448878;448879;448880;448881;448882;448883 354836;354837;354838;354839;354840;354841;354842;354843;354844;354845;354846;354847 354845 12 TSNPLVLEEASASQAGSR Unmodified 1815.8963 0.8962698 4653 Q9NUQ8 ABCF3 ATP-binding cassette sub-family F member 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 64.097 64.156 2 1.8249E-19 73464 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 123.02 109.36 65721000 0 0 0 4581000 4569400 7777700 5206200 5557400 5618800 6203100 7300200 0 5564900 6926900 6415600 53471 4653 48010 448884;448885;448886;448887;448888;448889;448890;448891;448892;448893;448894 354848;354849;354850;354851;354852;354853;354854;354855;354856;354857 354848 10 TSNPLVLEEASASQAGSRK Unmodified 1943.9912 0.99123281 4653 Q9NUQ8 ABCF3 ATP-binding cassette sub-family F member 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.66 2.95 4 1 24 1 3 1 2 2 2 2 2 2 2 2 2 2 2 2 56.941 56.057 2;3 3.6255E-49 63932 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 135.18 129.64 1385200000 35131000 124060000 94960000 70144000 65234000 96898000 95420000 81856000 64176000 106400000 116140000 135180000 92768000 72680000 134110000 53472 4653 48011 448895;448896;448897;448898;448899;448900;448901;448902;448903;448904;448905;448906;448907;448908;448909;448910;448911;448912;448913;448914;448915;448916;448917;448918;448919;448920;448921;448922;448923 354858;354859;354860;354861;354862;354863;354864;354865;354866;354867;354868;354869;354870;354871;354872;354873;354874;354875;354876;354877;354878;354879;354880;354881;354882;354883;354884;354885;354886;354887;354888 354887 23 TSNPYHHDQLDR Unmodified 1481.6648 0.66475372 1566 P49336 CDK8 Cyclin-dependent kinase 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 13.66 14.027 3 0.02101 13229 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 34.96 25.427 15429000 0 0 0 0 0 0 0 5680800 0 0 5578200 4170000 0 0 0 53473 1566 48012 448924;448925;448926 354889 354889 1 TSNRSEIETQTEGSTEK Unmodified 1895.8708 0.87084291 3785 Q96CV9 OPTN Optineurin yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 19.269 16.182 3 1.9194E-05 21158 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.234 66.316 11723000 0 10954000 769760 0 0 0 0 0 0 0 0 0 0 0 0 53474 3785 48013 448927;448928 354890 354890 1 TSNSLTEDSK Unmodified 1080.4935 0.49349744 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 10.155 6.5907 2 0.00065942 9182 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.71 71.022 11464000 4789400 6674500 0 0 0 0 0 0 0 0 0 0 0 0 0 53475 2203 48014 448929;448930 354891 354891 1 TSNSQHGNSAPSLLMPLPGTK Unmodified 2136.0634 0.063351898 5023 Q9UMZ2 SYNRG Synergin gamma yes yes 0 0 0 By MS/MS By matching By matching By MS/MS 8 3.46 1 3 1 1 1 1 76.658 74.614 3 6.189E-07 96848 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.315 61.714 58603000 40650000 0 0 1448700 0 0 0 0 0 0 0 0 0 3334200 13171000 53476 5023 48015 448931;448932;448933;448934 354892;354893 354893 2 TSNSYLRK Unmodified 967.50869 0.50869399 362 O43747 AP1G1 AP-1 complex subunit gamma-1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 12.842 9.7123 2 0.049222 15017 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.997 19.528 40051000 37424000 0 2627800 0 0 0 0 0 0 0 0 0 0 0 0 53477 362 48016 448935;448936 354894 354894 0 TSNTDGIDSFLDK Unmodified 1411.6467 0.64670362 233 O14975 SLC27A2 Very long-chain acyl-CoA synthetase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.065 71.139 2 0.0058006 81634 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 66.486 50.288 68393000 0 0 0 3059000 4641400 7306300 5038600 2807400 5443700 5498200 6364100 9773700 5439400 6252900 6767900 53478 233 48017 448937;448938;448939;448940;448941;448942;448943;448944;448945;448946;448947;448948 354895;354896;354897;354898;354899;354900;354901;354902;354903 354903 7 TSNVAREAALGAGFSDK Unmodified 1692.8431 0.84311201 1757 P55084 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 5 2 1 2 57.215 51.199 2;3 1.3811E-08 69497 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 125.53 105.32 87508000 52243000 24349000 10916000 0 0 0 0 0 0 0 0 0 0 0 0 53479 1757 48018 448949;448950;448951;448952;448953 354904;354905;354906;354907 354906 4 TSPAAAQSREIDCLSPEAQK Acetyl (Protein N-term) 2200.043 0.043010387 2661 Q32MZ4 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 yes yes 1 0 1 By MS/MS 2 0 2 2 66.181 60.263 2;3 1.7301E-23 77047 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 141.55 122.23 73519000 0 73519000 0 0 0 0 0 0 0 0 0 0 0 0 0 53480 2661 48019 448954;448955 354908;354909 354909 2 TSPADHGGSVGSESGGSAVDSVAGEHSVSGR Unmodified 2839.2605 0.26048439 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.654 39.833 4 5.5557E-97 43301 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 100.06 97.684 159660000 0 0 0 7736300 5438100 15207000 8501200 10746000 6188900 12689000 16708000 22384000 17060000 16083000 20917000 53481 2775 48020 448956;448957;448958;448959;448960;448961;448962;448963;448964;448965;448966;448967 354910;354911;354912;354913;354914;354915;354916;354917;354918;354919;354920;354921;354922;354923;354924;354925 354920 16 TSPASLDFPESQK Unmodified 1405.6725 0.67252444 3897 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 55.424 55.924 2 2.7458E-12 63483 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 131.46 100.89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53482 3897 48021 448968;448969 354926;354927 354926 2 TSPDTLR Unmodified 788.40283 0.40283194 2050 Q01130 SRSF2 Serine/arginine-rich splicing factor 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 12.768 12.909 2 0.03326 12133 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 72.138 22.019 109880000 0 0 0 0 11258000 11954000 13612000 9458500 266660 13213000 0 21678000 14370000 0 14068000 53483 2050 48022 448970;448971;448972;448973;448974;448975;448976;448977;448978 354928 354928 1 TSPEMSNSNNDERK Unmodified 1607.6846 0.68456246 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 7.0391 7.1585 3 5.8065E-05 4117 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 81.619 76.904 62452000 0 0 0 1835900 4251100 6000500 3007800 5391400 0 8898300 9600000 2494700 6389900 7346300 7235900 53484 2804 48023 448979;448980;448981;448982;448983;448984;448985;448986;448987;448988;448989 354929;354930;354931;354932;354933;354934;354935;354936;354937 354933 9 TSPEMSNSNNDERK Oxidation (M) 1623.6795 0.67947708 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 1 1 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 5.5796 4.9063 3 1.463E-06 3561 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 90.412 86.021 62275000 0 34067000 0 0 0 0 0 6370100 4511500 6596700 4314200 0 4698200 1717900 0 53485 2804 48023 448990;448991;448992;448993;448994;448995;448996;448997;448998 354938;354939;354940;354941;354942 354941 4437 5 TSPENVQDR Unmodified 1044.4836 0.48360145 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 8.0242 8.3006 2 0.024533 6683 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 50.607 24.668 5557400 0 0 0 0 0 0 0 0 0 0 4864200 0 693200 0 0 53486 1601 48024 448999;449000 354943 354943 1 TSPENVQDRFALVTPK Unmodified 1800.937 0.9370124 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 66.78 66.546 3 0.0016168 76191 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 36.638 24.615 99180000 0 0 14711000 3454700 5963400 9740900 5784600 7059400 5660600 8969000 12947000 10671000 6858900 7358800 0 53487 1601 48025 449001;449002;449003;449004;449005;449006;449007;449008;449009;449010;449011;449012 354944;354945;354946;354947;354948;354949;354950;354951 354946 6 TSPHTPNEK Unmodified 1009.4829 0.48287317 3229 Q8IVL5 LEPREL1 Prolyl 3-hydroxylase 2 yes yes 0 0 0 By MS/MS By matching 2.33 0.471 2 1 2 1 6.2758 3.3361 2 0.0076577 5118 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.136 79.499 90044000 0 82345000 7698800 0 0 0 0 0 0 0 0 0 0 0 0 53488 3229 48026 449013;449014;449015 354952;354953 354952 2 TSPINLGLNVNDLLK Unmodified 1609.9039 0.90392136 1634 P50616 TOB1 Protein Tob1 yes yes 0 0 0 By MS/MS 10 0 1 1 92.237 92.375 2 0.0013563 107047 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.448 39.29 2576600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2576600 53489 1634 48027 449016 354954 354954 1 TSPLNSSGSSQGR Unmodified 1276.6008 0.60075648 1644 P51003 PAPOLA Poly(A) polymerase alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.347 13.501 2 0.0068077 12763 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 46.706 29.32 33471000 0 0 0 1306400 1736300 2797900 2446500 1423900 1444300 3052900 4885300 3754800 2448400 2729500 5445000 53490 1644 48028 449017;449018;449019;449020;449021;449022;449023;449024;449025;449026;449027;449028 354955;354956;354957;354958;354959;354960 354955 6 TSPNEGLSGNPADLERR Unmodified 1811.8762 0.87620306 1098 P20020 ATP2B1 Plasma membrane calcium-transporting ATPase 1 yes yes 0 0 1 By MS/MS By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 45.248 45.385 3 0.037824 50092 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 15.942 10.099 17161000 0 0 0 0 2642200 0 0 0 0 3154900 3176500 0 3976500 4211300 0 53491 1098 48029 449029;449030;449031;449032;449033 354961 354961 1 TSPPCSPANLSR Unmodified 1285.6085 0.60848439 1577 P49585 PCYT1A Choline-phosphate cytidylyltransferase A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 34.233 34.42 2 0.0067101 37804 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 52.278 36.616 79227000 0 0 0 4345400 5160000 6940700 7145100 7193000 0 5549800 12800000 9482000 5356300 4858200 10396000 53492 1577 48030 449034;449035;449036;449037;449038;449039;449040;449041;449042;449043;449044 354962;354963;354964;354965;354966 354962 5 TSPSGKPATLK Unmodified 1085.6081 0.60807369 1222 P27695 APEX1 DNA-(apurinic or apyrimidinic site) lyase;DNA-(apurinic or apyrimidinic site) lyase, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 13.405 10.142 2 0.017102 12749 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 84.213 61.721 569950000 412390000 139700000 17861000 0 0 0 0 0 0 0 0 0 0 0 0 53493 1222 48031 449045;449046;449047;449048 354967;354968;354969 354968 3 TSPSVTPTPAR Unmodified 1112.5826 0.58258722 3588 Q8WXE0 CASKIN2 Caskin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 24.183 24.302 2 0.023296 25399 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 41.54 5.1447 54492000 0 0 0 8225100 7242500 0 8314500 7183800 0 0 9012700 0 7890200 6623000 0 53494 3588 48032 449049;449050;449051;449052;449053;449054;449055 354970 354970 1 TSPTTPEASATNSPCTSK Unmodified 1835.8207 0.82072159 2201 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 25.482 25.762 2 2.5254E-05 26250 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.602 59.914 17510000 0 0 0 0 0 0 3301200 0 0 7697700 0 0 0 0 6511200 53495 2201 48033 449056;449057;449058;449059;449060;449061;449062 354971;354972;354973;354974;354975 354971 5 TSPTVATQTGASATSTR Unmodified 1635.8064 0.80639216 2918 Q6P1L5 FAM117B Protein FAM117B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.435 26.635 2 0.00032502 28161 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 80.469 63.101 57105000 0 0 0 4705700 3361700 3701600 4799700 6121800 3366100 4446300 5634700 8294700 4328100 3166600 5177700 53496 2918 48034 449063;449064;449065;449066;449067;449068;449069;449070;449071;449072;449073;449074 354976;354977;354978;354979;354980;354981;354982;354983;354984 354982 9 TSPVAIFNGHQNSTFYVK Unmodified 2009.0007 0.0006752871 4769 Q9NZJ0 DTL Denticleless protein homolog yes yes 0 0 0 By MS/MS 2 0 1 1 83.003 74.873 3 0.00087679 98023 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.298 42.386 11169000 11169000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53497 4769 48035 449075 354985;354986;354987 354987 3 TSPVTASDPAGPSYAAATLQASSAASSASPVSR Unmodified 3062.4793 0.47925094 1082 P18887 XRCC1 DNA repair protein XRCC1 yes yes 0 0 0 By MS/MS 10 0 1 1 77.493 77.181 3 4.5718E-05 89267 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 27.112 20.389 2478700 0 0 0 0 2478700 0 0 0 0 0 0 0 0 0 0 53498 1082 48036 449076 354988 354988 1 TSPVVAPTSEPSSPLHTQLLK Unmodified 2188.1739 0.17394821 451 O75044 SRGAP2 SLIT-ROBO Rho GTPase-activating protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74.395 73.309 3 1.4026E-07 93937 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.801 65.564 197590000 20764000 62447000 7381700 4802100 8016200 10766000 6602600 7220600 9973400 11409000 10410000 25036000 6259300 6505300 0 53499 451 48037 449077;449078;449079;449080;449081;449082;449083;449084;449085;449086;449087;449088;449089;449090 354989;354990;354991;354992;354993;354994;354995;354996;354997;354998;354999;355000;355001 354994 12 TSPYPVILSFENHVDSAK Unmodified 2003 6.5851E-06 2067 Q01970 PLCB3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 91.127 84.614 3 8.7979E-05 107025 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.243 64.208 133750000 59501000 74244000 0 0 0 0 0 0 0 0 0 0 0 0 0 53500 2067 48038 449091;449092 355002;355003 355002 2 TSQDLIHQLEVFAAEGLK Unmodified 1998.0422 0.042205751 4859 Q9UBT7 CTNNAL1 Alpha-catulin yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 100.26 96.224 3 4.4729E-05 115131 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 63.337 58.856 9381000 0 9381000 0 0 0 0 0 0 0 0 0 0 0 0 0 53501 4859 48039 449093;449094 355004 355004 1 TSQDYQALTVHDNLAMK Unmodified 1933.9204 0.92037606 4079 Q9BPX3 NCAPG Condensin complex subunit 3 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 2 1 1 1 1 1 1 1 1 1 1 1 63.39 62.565 2;3 5.6377E-63 81012 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 164.53 157.4 482230000 0 403930000 0 2174300 2460000 8516100 3631600 5243400 0 7526800 7650600 10315000 5348100 7874600 17558000 53502 4079 48040 449095;449096;449097;449098;449099;449100;449101;449102;449103;449104;449105;449106;449107 355005;355006;355007;355008;355009;355010;355011;355012;355013 355008 9 TSQDYQALTVHDNLAMK Oxidation (M) 1949.9153 0.91529068 4079 Q9BPX3 NCAPG Condensin complex subunit 3 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 58.622 53.282 3 2.7753E-05 68345 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.498 66.77 265010000 0 265010000 0 0 0 0 0 0 0 0 0 0 0 0 0 53503 4079 48040 449108;449109 355014;355015 355014 5587 2 TSQEELLAEVVQGQSR Unmodified 1772.8905 0.89045614 2960 Q6PJT7 ZC3H14 Zinc finger CCCH domain-containing protein 14 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 2 1 81.554 81.667 2;3 3.3721E-05 93784 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 72.089 57.213 38702000 0 0 0 0 2500900 0 3372200 3052000 2445300 4034000 4930300 5507400 3341700 2724100 6793800 53504 2960 48041 449110;449111;449112;449113;449114;449115;449116;449117;449118;449119;449120 355016;355017;355018;355019;355020 355018 5 TSQEGPGDSVK Unmodified 1103.5095 0.50948185 4629 Q9NSK0 KLC4 Kinesin light chain 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 9.0593 9.1836 2 0.005073 7579 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 59.931 32.049 32278000 0 0 0 3247400 1805700 0 3068100 2243500 2079100 0 0 7349000 3630000 2729100 6126600 53505 4629 48042 449121;449122;449123;449124;449125;449126;449127;449128;449129 355021;355022;355023;355024;355025 355024 5 TSQGTVPTALAFER Unmodified 1476.7573 0.75725712 2649 Q2KHR3 QSER1 Glutamine and serine-rich protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.724 69.801 2 0.01358 80385 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 37.968 18.181 63416000 0 0 0 2537900 4601300 3942300 5041300 4545100 3882800 7107900 5971400 6865900 6776000 5527500 6616300 53506 2649 48043 449130;449131;449132;449133;449134;449135;449136;449137;449138;449139;449140;449141 355026;355027 355026 2 TSQHLGSGQSAVR Unmodified 1326.664 0.66402543 4288 Q9C0D5 TANC1 Protein TANC1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.219 11.334 3 0.0036272 10294 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 48.532 42.238 97134000 0 0 0 7675300 5104700 6962200 8084000 6252400 6244600 9243800 0 15966000 8428700 9143600 14029000 53507 4288 48044 449142;449143;449144;449145;449146;449147;449148;449149;449150;449151;449152 355028;355029;355030;355031;355032;355033;355034;355035 355029 4 TSQLGDSPFYPGK Unmodified 1395.667 0.66704513 1600 P49790 NUP153 Nuclear pore complex protein Nup153 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 61.077 60.405 2 3.919E-21 76736 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 172.21 172.21 514730000 0 113290000 0 20432000 23191000 20197000 35377000 34163000 24991000 36566000 36094000 51517000 34867000 30427000 53617000 53508 1600 48045 449153;449154;449155;449156;449157;449158;449159;449160;449161;449162;449163;449164;449165;449166 355036;355037;355038;355039;355040;355041;355042;355043;355044;355045;355046;355047;355048;355049;355050 355040 12 TSQLLAELNFEEDEEDTYYTK Unmodified 2537.1333 0.13332476 3683 Q92900 UPF1 Regulator of nonsense transcripts 1 yes yes 0 0 0 By MS/MS 2 0 1 1 91.884 83.754 3 0.00013504 108673 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 59.814 47.511 15025000 15025000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53509 3683 48046 449167 355051 355051 1 TSQMQELHK Oxidation (M) 1116.5234 0.52335778 303 O43172 PRPF4 U4/U6 small nuclear ribonucleoprotein Prp4 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 6.0949 6.198 2 0.018827 3476 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.476 74.949 45240000 0 0 0 2722600 3543300 3996100 4866100 3105100 3654200 4019500 0 4036500 4184900 6297200 4814600 53510 303 48047 449168;449169;449170;449171;449172;449173;449174;449175;449176;449177;449178 355052;355053;355054 355053 387 0 TSQMQELHK Unmodified 1100.5284 0.52844316 303 O43172 PRPF4 U4/U6 small nuclear ribonucleoprotein Prp4 yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 13.823 13.901 2 0.01151 12503 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 101.72 81.201 14488000 0 0 0 0 4077600 0 0 0 3471000 0 0 0 0 6939500 0 53511 303 48047 449179;449180;449181 355055 355055 0 TSQNSELNNMQDLVEDYK Oxidation (M) 2142.9375 0.93754226 79 CON__P35908v2;P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 45 4 4 3 4 4 4 4 4 4 3 4 3 57.846 57.951 2;3 0 66372 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 278.39 273.11 + 4554500000 0 0 0 744190000 263020000 553290000 241710000 313150000 335640000 454590000 354300000 499060000 428440000 243840000 123280000 53512 79 48048 449182;449183;449184;449185;449186;449187;449188;449189;449190;449191;449192;449193;449194;449195;449196;449197;449198;449199;449200;449201;449202;449203;449204;449205;449206;449207;449208;449209;449210;449211;449212;449213;449214;449215;449216;449217;449218;449219;449220;449221;449222;449223;449224;449225;449226 355056;355057;355058;355059;355060;355061;355062;355063;355064;355065;355066;355067;355068;355069;355070;355071;355072;355073;355074;355075;355076;355077;355078;355079;355080;355081;355082;355083;355084;355085;355086;355087;355088;355089;355090;355091;355092;355093;355094 355057 117 33 TSQNSELNNMQDLVEDYK Unmodified 2126.9426 0.94262764 79 CON__P35908v2;P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 27 2 2 2 2 2 2 2 3 3 2 3 2 80.02 80.093 2;3 0 92937 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 276.51 255.26 + 3158400000 0 0 0 68417000 126830000 304750000 84256000 344120000 188710000 573510000 294920000 396570000 269820000 174680000 331780000 53513 79 48048 449227;449228;449229;449230;449231;449232;449233;449234;449235;449236;449237;449238;449239;449240;449241;449242;449243;449244;449245;449246;449247;449248;449249;449250;449251;449252;449253 355095;355096;355097;355098;355099;355100;355101;355102;355103;355104;355105;355106;355107;355108;355109;355110;355111;355112;355113;355114;355115;355116;355117;355118;355119;355120;355121;355122;355123;355124 355096 20 TSQNSELNNMQDLVEDYKK Oxidation (M) 2271.0325 0.03250528 79 CON__P35908v2;P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 47 4 4 3 4 4 4 4 4 5 4 4 3 49.607 49.753 2;3 0 56024 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 287.48 277.95 + 14638000000 0 0 0 2495100000 1037600000 908610000 840590000 1360100000 840130000 1032200000 1301800000 2170400000 1540800000 720100000 390810000 53514 79 48049 449254;449255;449256;449257;449258;449259;449260;449261;449262;449263;449264;449265;449266;449267;449268;449269;449270;449271;449272;449273;449274;449275;449276;449277;449278;449279;449280;449281;449282;449283;449284;449285;449286;449287;449288;449289;449290;449291;449292;449293;449294;449295;449296;449297;449298;449299;449300 355125;355126;355127;355128;355129;355130;355131;355132;355133;355134;355135;355136;355137;355138;355139;355140;355141;355142;355143;355144;355145;355146;355147;355148;355149;355150;355151;355152;355153;355154;355155;355156;355157 355149 117 32 TSQNSELNNMQDLVEDYKK Unmodified 2255.0376 0.037590658 79 CON__P35908v2;P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 75.683 75.742 2;3 5.0259E-125 86478 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 192.6 188.96 + 9249200000 0 0 0 387200000 388890000 439520000 351560000 1328200000 477210000 1056300000 836040000 2079400000 728850000 478360000 697750000 53515 79 48049 449301;449302;449303;449304;449305;449306;449307;449308;449309;449310;449311;449312;449313;449314;449315;449316;449317;449318;449319;449320;449321;449322;449323;449324 355158;355159;355160;355161;355162;355163;355164;355165;355166;355167;355168;355169;355170;355171;355172;355173;355174;355175;355176 355167 19 TSQPPVPQGEAEEDSQGK Unmodified 1882.8545 0.85446456 2189 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.766 31.952 2 1.7524E-29 34807 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 112.42 106.82 157610000 0 0 0 10202000 9091200 11654000 10115000 7904100 9955000 21708000 14944000 19229000 14450000 10667000 17696000 53516 2189 48050 449325;449326;449327;449328;449329;449330;449331;449332;449333;449334;449335;449336 355177;355178;355179;355180;355181;355182;355183;355184;355185;355186;355187;355188 355178 12 TSQQLQLIDEQDSYIQSR Unmodified 2151.0444 0.044390595 2251 Q13190 STX5 Syntaxin-5 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 74.885 75.003 2 2.1057E-20 86582 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 128.96 107.4 44331000 0 0 0 0 2756100 0 2209100 4184100 0 6173700 5651100 6656300 3864800 4042700 8792800 53517 2251 48051 449337;449338;449339;449340;449341;449342;449343;449344;449345;449346 355189;355190;355191;355192 355192 4 TSQSWVER Unmodified 991.47231 0.47230849 4428 Q9H6Z4 RANBP3 Ran-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 25.915 26.1 2 0.0093228 26431 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.265 38.818 51966000 0 0 0 0 3285000 5091800 3451000 0 0 8654300 10308000 0 0 7304700 13871000 53518 4428 48052 449347;449348;449349;449350;449351;449352;449353 355193;355194;355195;355196 355194 3 TSQTVATFLDELAQK Unmodified 1650.8465 0.84646606 1704 P52888 THOP1 Thimet oligopeptidase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3.6 3.2 8 2 2 4 2 1 1 95.254 91.735 2;3 6.1512E-10 114887 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 136.53 121.15 901840000 140430000 736960000 19988000 0 0 0 0 0 0 0 904900 0 0 0 3550400 53519 1704 48053 449354;449355;449356;449357;449358;449359;449360;449361;449362;449363 355197;355198;355199;355200;355201;355202;355203;355204;355205 355202 8 TSQVGAASAPAK Unmodified 1086.5669 0.56693715 2289 Q13428 TCOF1 Treacle protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.17 3.44 1 3 14 2 1 1 1 1 1 1 1 1 1 2 1 1 1 2 18.409 18.314 2 2.194E-05 12562 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 103.26 91.892 531530000 51025000 22306000 8065100 21662000 27662000 25398000 31447000 24872000 21267000 48997000 53263000 50393000 48253000 38692000 58226000 53520 2289 48054 449364;449365;449366;449367;449368;449369;449370;449371;449372;449373;449374;449375;449376;449377;449378;449379;449380;449381 355206;355207;355208;355209;355210;355211;355212;355213;355214;355215;355216;355217;355218;355219;355220 355217 15 TSQVVEQDVPEEVDRAK Unmodified 1927.9487 0.9486993 5298 Q9Y6X8 ZHX2 Zinc fingers and homeoboxes protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 47.698 47.854 3 0.00037432 53767 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 57.197 40.318 50985000 0 0 0 5078700 3300400 0 5103000 5015000 0 6578800 5090700 7462200 0 6434500 6921300 53521 5298 48055 449382;449383;449384;449385;449386;449387;449388;449389;449390;449391 355221;355222;355223;355224;355225;355226;355227;355228;355229 355221 9 TSRAPSVATVGSICDLNLK Unmodified 1988.0361 0.036074515 487 O75369 FLNB Filamin-B yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 74.447 74.69 3 0.00027967 85610 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.916 33.634 23459000 0 0 0 0 0 0 0 0 0 0 0 0 0 5380900 18078000 53522 487 48056 449392;449393 355230;355231 355230 2 TSREQEIPSLACEFK Unmodified 1793.8618 0.86179854 4512 Q9HCE0 EPG5 Ectopic P granules protein 5 homolog yes yes 0 0 1 By MS/MS 2 0 1 1 73.151 70.066 3 0.010629 85750 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 43.592 26.311 2850600 0 0 2850600 0 0 0 0 0 0 0 0 0 0 0 0 53523 4512 48057 449394 355232 355232 1 TSRFGGPEMYGYPDPSYLK Unmodified 2163.9935 0.993541 3500 Q8TDB6 DTX3L E3 ubiquitin-protein ligase DTX3L yes yes 0 0 1 By MS/MS 2 0 1 1 82.003 73.873 3 0.00028352 96782 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.672 44.418 10695000 10695000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53524 3500 48058 449395 355233 355233 1 TSRPENAIIYNNNEDFQVGQAK Unmodified 2507.2041 0.20407913 1249 P29401 TKT Transketolase yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.74 2.92 3 16 1 1 1 1 1 1 1 1 1 1 3 2 1 1 2 63.279 63.236 2;3 3.9521E-170 71496 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 245.76 226.68 1549400000 1064700 160830 5281500 17541000 12405000 20226000 12336000 17293000 12787000 24157000 290730000 196520000 15453000 168770000 754680000 53525 1249 48059 449396;449397;449398;449399;449400;449401;449402;449403;449404;449405;449406;449407;449408;449409;449410;449411;449412;449413;449414 355234;355235;355236;355237;355238;355239;355240;355241;355242;355243;355244;355245;355246;355247;355248;355249;355250;355251;355252;355253;355254;355255;355256;355257;355258;355259;355260;355261;355262;355263 355243 29 TSRQECQLSR Unmodified 1263.599 0.59898234 2839 Q63ZY3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 yes yes 0 0 1 By matching By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 7.6516 7.7944 3 0.01772 5178 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.836 42.297 40438000 0 0 0 0 2771100 3877100 0 2858800 3558900 0 0 13903000 3694600 3952400 5822100 53526 2839 48060 449415;449416;449417;449418;449419;449420;449421;449422 355264;355265 355264 0 TSRSALPDAAPVTK Unmodified 1412.7623 0.7623425 2857 Q68DC2 ANKS6 Ankyrin repeat and SAM domain-containing protein 6 yes yes 0 0 1 By MS/MS 2 0 1 1 42.52 35.785 3 0.028637 49267 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 35.527 16.95 13783000 13783000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53527 2857 48061 449423 355266 355266 1 TSRSSVETTPSVIQHVGQPPATPAK Unmodified 2574.3402 0.34017869 2989 Q6W2J9 BCOR BCL-6 corepressor yes yes 0 0 1 By MS/MS 2 0 1 1 63.784 55.505 4 0.00019115 74719 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 33.757 27.315 23239000 23239000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53528 2989 48062 449424 355267 355267 1 TSSAEVTIQNVIK Unmodified 1388.7511 0.75110911 1555 P48960 CD97 CD97 antigen;CD97 antigen subunit alpha;CD97 antigen subunit beta yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 74.919 70.613 2 1.7513E-29 88331 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 200.71 178.37 110520000 0 110520000 0 0 0 0 0 0 0 0 0 0 0 0 0 53529 1555 48063 449425;449426 355268 355268 1 TSSAFVGK Unmodified 795.41267 0.41266834 4011 Q99460 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 15.936 15.351 2 0.015996 14885 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 67.981 30.335 1061100000 82449000 812830000 0 10573000 10598000 11469000 0 6135200 2717600 23742000 39209000 46014000 0 0 15381000 53530 4011 48064 449427;449428;449429;449430;449431;449432;449433;449434;449435;449436;449437 355269;355270;355271;355272;355273 355273 5 TSSAVSTPSK Unmodified 963.48729 0.48728985 4822 Q9P2N5 RBM27 RNA-binding protein 27 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 7.7853 8.0425 2 0.034963 6231 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 70.908 40.296 11465000 0 0 0 0 0 0 0 1742100 536780 0 6150700 0 0 0 3035800 53531 4822 48065 449438;449439;449440;449441 355274 355274 0 TSSDPTCVEK Unmodified 1122.4863 0.48630357 237 O14980 XPO1 Exportin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.94 3.58 1 3 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18.421 18.259 2 3.2721E-11 92694 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 161.79 151.8 285460000 120130000 18865000 1496900 4161100 7073300 20187000 10552000 9706600 7014200 15737000 12372000 12288000 11588000 14037000 20249000 53532 237 48066 449442;449443;449444;449445;449446;449447;449448;449449;449450;449451;449452;449453;449454;449455;449456;449457 355275;355276;355277;355278;355279;355280;355281;355282;355283;355284;355285;355286;355287;355288;355289 355281 12 TSSDSALHTSVMNPSPQDTYPGPTPPSILPSR Oxidation (M) 3352.5881 0.58814946 2697 Q53ET0 CRTC2 CREB-regulated transcription coactivator 2 yes yes 0 1 0 By MS/MS By matching 10 0 2 1 1 77.401 77.582 3 4.9414E-21 89571 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 53.482 51.757 18129000 0 0 0 0 0 0 0 0 0 8632400 0 0 0 0 9496700 53533 2697 48067 449458;449459 355290 355290 4353 1 TSSEASVSSSVAK Unmodified 1238.599 0.59902514 4733 Q9NXV6 CDKN2AIP CDKN2A-interacting protein yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.276 18.464 2 3.6555E-12 18615 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 124.1 88.808 213280000 0 0 0 13991000 15884000 18905000 15300000 13516000 12077000 21757000 18488000 22885000 18475000 15816000 26191000 53534 4733 48068 449460;449461;449462;449463;449464;449465;449466;449467;449468;449469;449470;449471 355291;355292;355293;355294;355295;355296;355297 355296 7 TSSETNSTTSRVMEEK Unmodified 1785.8051 0.80507153 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 1 By MS/MS 2 0 1 1 26.242 21.982 3 1.1033E-10 29024 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.575 81.296 15211000 0 15211000 0 0 0 0 0 0 0 0 0 0 0 0 0 53535 3443 48069 449472 355298;355299;355300 355299 3 TSSFAASGPLIPEENK Unmodified 1646.8152 0.81516593 5275 Q9Y6B7 AP4B1 AP-4 complex subunit beta-1 yes yes 0 0 0 By MS/MS 2 0 1 1 73.482 67.937 2 0.00036593 85812 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.021 70.156 36557000 0 36557000 0 0 0 0 0 0 0 0 0 0 0 0 0 53536 5275 48070 449473 355301 355301 1 TSSFAEPGGGGGGGGGGPGGSASGPGGTGGGK Unmodified 2432.0589 0.058871461 1604 P49840 GSK3A Glycogen synthase kinase-3 alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 15 1 1 1 1 1 1 1 2 1 1 2 2 35.908 36.154 2;3 7.7932E-16 39468 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 48.305 45.017 96342000 0 0 0 4090600 3597800 8713600 3489000 4757600 3184300 7719500 11581000 12948000 3019900 10850000 22392000 53537 1604 48071 449474;449475;449476;449477;449478;449479;449480;449481;449482;449483;449484;449485;449486;449487;449488 355302;355303;355304;355305;355306;355307;355308;355309;355310;355311 355305 10 TSSFTEQLDEGTPNRESGDTQSFAQK Unmodified 2859.2795 0.2794885 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 58.345 58.64 3 5.7118E-13 66703 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 59.678 56.954 34596000 0 0 0 0 0 3729400 4927700 5465700 0 0 5294400 5075100 5176100 0 4927300 53538 2291 48072 449489;449490;449491;449492;449493;449494;449495 355312;355313;355314;355315 355313 4 TSSGDASSLSIEETNK Unmodified 1624.7428 0.74278885 312 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.424 37.604 2 7.8905E-36 41484 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 155.02 149.04 180230000 0 0 0 11122000 10252000 11866000 12171000 14495000 12431000 13899000 22862000 19425000 15750000 14232000 21727000 53539 312 48073 449496;449497;449498;449499;449500;449501;449502;449503;449504;449505;449506;449507 355316;355317;355318;355319;355320;355321;355322;355323;355324;355325;355326;355327 355324 12 TSSGLGGSTTDFLEEWK Unmodified 1813.837 0.83702358 3885 Q96IZ0 PAWR PRKC apoptosis WT1 regulator protein yes yes 0 0 0 By MS/MS 10 0 1 1 85.16 85.328 2 5.2579E-05 98553 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.89 64.677 8717700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8717700 53540 3885 48074 449508 355328 355328 1 TSSGTKPSVKPTSATK Unmodified 1575.8468 0.84680041 2456 Q14966 ZNF638 Zinc finger protein 638 yes yes 0 0 2 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 14 2 1 1 1 1 1 1 1 2 1 1 1 7.3459 7.4617 3;4 0.0018371 4363 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 70.784 62.607 95217000 0 0 0 6718600 3123300 1553800 4683900 4801500 3429900 8863000 18409000 19356000 7637900 7286300 9354000 53541 2456 48075 449509;449510;449511;449512;449513;449514;449515;449516;449517;449518;449519;449520;449521;449522 355329;355330 355329 1 TSSGTSIAGNPFQAK Unmodified 1464.7209 0.72087161 4763 Q9NZC9 SMARCAL1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.841 52.983 2 5.1374E-19 59920 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 109.16 92.162 120020000 0 0 0 4554900 4224500 10152000 4748200 4226100 5940000 10577000 14810000 19278000 16918000 6804000 17790000 53542 4763 48076 449523;449524;449525;449526;449527;449528;449529;449530;449531;449532;449533;449534 355331;355332;355333;355334;355335;355336;355337;355338;355339;355340;355341 355332 11 TSSGTSLSAMHSSGSSGK Unmodified 1667.7421 0.74207734 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 16.977 17.408 3 0.0017985 16334 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 30.428 20.891 33074000 0 0 0 0 0 0 0 0 0 0 5266400 9016100 4800200 5811600 8179400 53543 2203 48077 449535;449536;449537;449538;449539 355342;355343;355344;355345 355342 4 TSSGTSLSAMHSSGSSGK Oxidation (M) 1683.737 0.73699196 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 7.6403 7.8009 3 0.00080661 6143 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 40.493 34.016 23914000 0 0 0 0 841280 0 1674500 0 1488500 1885500 8455400 3360300 3256900 0 2951600 53544 2203 48077 449540;449541;449542;449543;449544;449545;449546;449547 355346 355346 3584 1 TSSLAPVVGTTTTTPSPSAIK Unmodified 2015.0787 0.078650837 3653 Q92733 PRCC Proline-rich protein PRCC yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.89 2.72 3 1 24 1 3 2 2 2 2 2 2 2 2 2 2 2 2 72.299 71.581 2;3 1.7796E-110 82429 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 184.21 171.23 1656400000 12207000 404350000 0 64909000 75032000 66866000 97833000 60992000 78603000 124220000 141430000 102620000 75753000 111550000 240000000 53545 3653 48078 449548;449549;449550;449551;449552;449553;449554;449555;449556;449557;449558;449559;449560;449561;449562;449563;449564;449565;449566;449567;449568;449569;449570;449571;449572;449573;449574;449575 355347;355348;355349;355350;355351;355352;355353;355354;355355;355356;355357;355358;355359;355360;355361;355362;355363;355364;355365;355366;355367;355368 355358 16 TSSLESASNIELQTTNTSYEEMK Unmodified 2562.1643 0.16430731 1638 P50851 LRBA Lipopolysaccharide-responsive and beige-like anchor protein yes yes 0 0 0 By MS/MS 2 0 1 1 76.881 72.043 3 4.4719E-131 90000 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 132.76 127.86 27387000 0 27387000 0 0 0 0 0 0 0 0 0 0 0 0 0 53546 1638 48079 449576 355369 355369 1 TSSLLILTENENEK Unmodified 1589.8148 0.81483158 5247 Q9Y5S2 CDC42BPB Serine/threonine-protein kinase MRCK beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.08 3.33 2 1 9 2 1 1 1 1 1 1 1 1 1 1 74.909 73.979 2 1.5838E-35 92707 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 159.94 141.88 109780000 0 61247000 2818200 4114100 0 5962400 2988400 0 3806600 5199800 0 7715700 6320600 0 9607700 53547 5247 48080 449577;449578;449579;449580;449581;449582;449583;449584;449585;449586;449587;449588 355370;355371;355372;355373;355374;355375;355376;355377;355378;355379;355380;355381;355382;355383 355373 13 TSSLPNHSEPDHDTDAGLER Unmodified 2176.9621 0.96211753 2863 Q69YN4 KIAA1429 Protein virilizer homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 2 1 2 1 1 1 2 31.136 31.394 3;4 0.0011428 34391 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 25.619 18.905 82579000 0 0 0 4933700 5410200 9833900 0 0 8703100 5862600 8684700 10511000 8044800 6722800 13872000 53548 2863 48081 449589;449590;449591;449592;449593;449594;449595;449596;449597;449598;449599;449600;449601 355384;355385;355386;355387;355388 355384 5 TSSMEISSILQELK Oxidation (M) 1580.7967 0.79673867 2759 Q5SW79;Q96L14 CEP170;CEP170P1 Centrosomal protein of 170 kDa;Cep170-like protein yes no 0 1 0 By MS/MS 2 0 1 1 94.259 89.362 2 0.0043709 110899 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 61.419 49.36 16272000 0 16272000 0 0 0 0 0 0 0 0 0 0 0 0 0 53549 2759 48082 449602 355389 355389 4388 1 TSSMEISSILQELK Unmodified 1564.8018 0.80182405 2759 Q5SW79;Q96L14 CEP170;CEP170P1 Centrosomal protein of 170 kDa;Cep170-like protein yes no 0 0 0 By MS/MS 2 0 1 1 97.405 92.632 2 2.5606E-14 114695 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 153.11 141.24 31727000 0 31727000 0 0 0 0 0 0 0 0 0 0 0 0 0 53550 2759 48082 449603 355390 355390 1 TSSNNNSMVSNTLAK Unmodified 1566.7308 0.73078437 448 O60934 NBN Nibrin yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36.081 35.337 2 1.5891E-21 38608 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 117.98 98.733 86551000 2570100 12628000 0 3492900 3360500 5455500 5871400 0 4645600 6398800 7779300 6733900 5991600 8958100 12665000 53551 448 48083 449604;449605;449606;449607;449608;449609;449610;449611;449612;449613;449614;449615;449616;449617 355391;355392;355393;355394;355395;355396;355397;355398;355399;355400;355401;355402 355401 12 TSSNNNSMVSNTLAK Oxidation (M) 1582.7257 0.72569899 448 O60934 NBN Nibrin yes yes 0 1 0 By matching By matching By matching By matching By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 21.066 21.25 2 0.014179 21656 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 47.288 37.335 20988000 0 0 0 0 1853800 2294800 3344200 0 2322900 3130700 0 3776300 0 0 4265000 53552 448 48083 449618;449619;449620;449621;449622;449623;449624 355403 355403 571 0 TSSPEESIRMTK Unmodified 1364.6606 0.66057954 5201 Q9Y4G6 TLN2 Talin-2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 34.719 30.642 3 0.0080663 38708 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 54.343 39.656 17673000 0 12346000 5327000 0 0 0 0 0 0 0 0 0 0 0 0 53553 5201 48084 449625;449626 355404;355405 355405 2 TSSQLVTMHDLK Oxidation (M) 1374.6813 0.68131498 5244 Q9Y5Q8 GTF3C5 General transcription factor 3C polypeptide 5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 6 2 2 2 36.448 31.529 2;3 0.00082009 41528 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.864 60.661 187430000 73664000 46376000 67386000 0 0 0 0 0 0 0 0 0 0 0 0 53554 5244 48085 449627;449628;449629;449630;449631;449632 355406;355407;355408 355406 6646 2 TSSQLVTMHDLK Unmodified 1358.6864 0.68640036 5244 Q9Y5Q8 GTF3C5 General transcription factor 3C polypeptide 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 5 2 1 2 53.956 47.968 2;3 0.0060032 65621 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.813 66.542 292070000 158670000 82508000 50883000 0 0 0 0 0 0 0 0 0 0 0 0 53555 5244 48085 449633;449634;449635;449636;449637 355409;355410;355411;355412;355413 355411 3 TSSQYVASAIAK Unmodified 1224.635 0.63501672 457 O75128 COBL Protein cordon-bleu yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 41.22 41.383 2 0.0072896 46177 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 68.49 61.297 87509000 0 0 0 6944900 5081700 5191100 7688300 7701300 6816000 8548700 10710000 10683000 0 7943100 10201000 53556 457 48086 449638;449639;449640;449641;449642;449643;449644;449645;449646;449647;449648 355414;355415 355414 2 TSSRVNSTTKPEDGGLK Unmodified 1775.9014 0.90135517 5192 Q9Y4B6 VPRBP Protein VPRBP yes yes 0 0 2 By MS/MS By MS/MS 2 0 4 2 2 18.42 14.906 3;4 2.3838E-06 21536 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.583 64.242 102190000 87333000 0 14859000 0 0 0 0 0 0 0 0 0 0 0 0 53557 5192 48087 449649;449650;449651;449652 355416;355417;355418;355419 355416 4 TSSSDTLSEEK Unmodified 1182.5252 0.5251915 4236 Q9BXW9 FANCD2 Fanconi anemia group D2 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 11.796 11.973 2 0.001273 10646 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.885 66.99 23833000 0 0 0 0 1125900 3153500 2421000 0 1008100 2243400 2251800 3218500 2628300 1926600 3855700 53558 4236 48088 449653;449654;449655;449656;449657;449658;449659;449660;449661;449662 355420;355421;355422;355423;355424 355424 4 TSSSFAAAMAR Unmodified 1098.5128 0.51279309 1224 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 42.833 42.944 2 0.0062945 47756 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 56.916 39.52 24447000 0 0 0 0 2633600 0 0 4710000 0 3800000 8536500 0 0 4766700 0 53559 1224 48089 449663;449664;449665;449666;449667;449668 355425;355426 355426 2 TSSSINILENK Unmodified 1204.6299 0.62993134 5337 yes yes 0 0 0 By MS/MS 2 0 2 2 55.233 49.418 3 0.0085514 63933 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 41.164 30.686 + 36541000 0 36541000 0 0 0 0 0 0 0 0 0 0 0 0 0 53560 5337 48090 449669;449670 355427;355428 355427 1 TSSSSPANSDVEIDGIGR Unmodified 1790.8282 0.82824981 392 O60293 ZFC3H1 Zinc finger C3H1 domain-containing protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 54.486 54.571 2 4.7643E-11 61828 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 88.552 78.029 75941000 0 0 0 4962000 5473500 5003300 7345900 4672500 4463500 8244200 8801200 9689800 8956400 8328400 0 53561 392 48091 449671;449672;449673;449674;449675;449676;449677;449678;449679;449680;449681;449682 355429;355430;355431;355432;355433;355434;355435;355436;355437;355438;355439;355440;355441 355431 13 TSSSSRPLPEVR Unmodified 1314.6892 0.68917755 10 A1X283 SH3PXD2B SH3 and PX domain-containing protein 2B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.31 27.507 3 0.0042287 29886 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 67.456 51.701 147850000 0 0 0 8394000 10727000 14525000 11856000 8723500 10284000 14441000 17093000 13379000 10083000 10861000 17488000 53562 10 48092 449683;449684;449685;449686;449687;449688;449689;449690;449691;449692;449693;449694 355442;355443;355444;355445;355446;355447 355447 4 TSSTDLSDIPALPANPIPVIK Unmodified 2148.1678 0.16780019 1644 P51003 PAPOLA Poly(A) polymerase alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.69 3.47 2 2 9 4 1 1 1 1 1 1 1 1 1 92.586 91.436 2;3 3.1471E-47 112779 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 177.81 157.97 628220000 0 596920000 0 0 0 2379800 1413700 0 1341800 6523000 3424200 4295400 1083200 2388700 8445400 53563 1644 48093 449695;449696;449697;449698;449699;449700;449701;449702;449703;449704;449705;449706;449707 355448;355449;355450;355451;355452;355453;355454;355455 355448 7 TSSTLDSEGTFNSYRK Unmodified 1791.8275 0.82752153 3636 Q92609 TBC1D5 TBC1 domain family member 5 yes yes 0 0 1 By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 41.345 41.676 3 0.024173 46397 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 24.455 17.874 39721000 0 0 0 0 0 3568200 4207500 0 2323000 4082300 4818400 4414500 4816000 3634800 7856800 53564 3636 48094 449708;449709;449710;449711;449712;449713;449714;449715;449716 355456;355457 355456 2 TSSTLSEDQMSR Unmodified 1340.5878 0.58780853 3422 Q8NEB9 PIK3C3 Phosphatidylinositol 3-kinase catalytic subunit type 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 25.004 25.169 2 0.0010619 26905 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 70.977 53.541 16443000 0 0 0 0 1909100 0 3085800 0 0 0 0 0 0 3917400 7530500 53565 3422 48095 449717;449718;449719;449720;449721;449722;449723;449724 355458;355459;355460;355461;355462;355463;355464;355465 355460 8 TSSTLSEDQMSR Oxidation (M) 1356.5827 0.58272315 3422 Q8NEB9 PIK3C3 Phosphatidylinositol 3-kinase catalytic subunit type 3 yes yes 0 1 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 12.977 13.197 2 0.0042767 12621 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 51.276 32.496 15063000 0 0 0 0 0 1677500 2058400 1369800 0 1689400 1935100 2956600 1818000 0 1557700 53566 3422 48095 449725;449726;449727;449728;449729;449730;449731;449732 355466;355467 355467 4971 2 TSSTSSSVNSQTLNR Unmodified 1567.7438 0.7437919 4743 Q9NYJ8 TAB2 TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 21.071 21.222 2 0.00020756 22125 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 69.451 56.359 53665000 0 0 0 3459200 2993100 5394400 5134300 3949200 4986000 6117300 6615700 0 6510400 0 8505800 53567 4743 48096 449733;449734;449735;449736;449737;449738;449739;449740;449741;449742 355468;355469;355470;355471 355471 3 TSSVFEDPVISK Unmodified 1307.6609 0.66089712 5115 Q9Y2R9 MRPS7 28S ribosomal protein S7, mitochondrial yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.584 64.673 2 0.0026165 73165 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.633 46.43 88940000 0 0 0 4483600 5447300 5570900 4683400 6426300 4338300 9000700 8819800 10772000 9930000 6830200 12638000 53568 5115 48097 449743;449744;449745;449746;449747;449748;449749;449750;449751;449752;449753;449754 355472;355473;355474;355475;355476;355477;355478;355479;355480;355481;355482 355476 11 TSSVHRPPAMTVK Unmodified 1409.7449 0.74491829 2489 Q15054 POLD3 DNA polymerase delta subunit 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 22.591 22.754 3 0.0050981 22836 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 35.037 25.149 64683000 0 0 0 2662700 4075800 4951500 4558000 3898000 4246300 7308100 9241900 0 5825000 7518300 10398000 53569 2489 48098 449755;449756;449757;449758;449759;449760;449761;449762;449763;449764;449765 355483;355484;355485 355485 3 TSSVLGMSVESAPAVEEEK Oxidation (M) 1964.9249 0.92485231 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 1 0 By MS/MS By matching By matching 10 0 3 1 1 1 61.024 61.283 2 0.0011563 70104 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 42.789 33.834 17789000 0 0 0 0 0 2807500 0 0 0 0 0 0 0 5637500 9343900 53570 2203 48099 449766;449767;449768 355486 355486 3585 1 TSSVLGMSVESAPAVEEEK Unmodified 1948.9299 0.92993769 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 0 0 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 73.898 74.127 2 7.0057E-31 84937 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.14 91.938 20222000 0 0 0 0 0 0 0 0 0 0 4268000 3808400 2573900 0 9571700 53571 2203 48099 449769;449770;449771;449772 355487 355487 1 TSSVSNPQDSVGSPCSR Unmodified 1763.7744 0.7744401 1558 P49023 PXN Paxillin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.584 29.776 2 2.6208E-36 31122 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 145.71 120.01 143130000 0 0 0 6749700 3827000 6065000 6320800 5797300 5762300 10327000 17573000 18656000 12607000 15150000 34294000 53572 1558 48100 449773;449774;449775;449776;449777;449778;449779;449780;449781;449782;449783;449784 355488;355489;355490;355491;355492;355493;355494;355495;355496;355497;355498;355499 355491 12 TSSVSNPQDSVGSPCSRVGEEEHVYSFPNK Unmodified 3279.4738 0.47384799 1558 P49023 PXN Paxillin yes yes 0 0 1 By MS/MS 2 0 1 1 68.09 62.19 4 3.7714E-11 79373 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 56.533 50.753 18885000 0 18885000 0 0 0 0 0 0 0 0 0 0 0 0 0 53573 1558 48101 449785 355500 355500 1 TSSVSSISQVSPER Unmodified 1462.7264 0.72635092 1455 P42356 PI4KA Phosphatidylinositol 4-kinase alpha yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 42.294 42.522 2 0.026343 47303 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 42.809 26.928 38737000 0 0 0 0 3189600 2998500 3269900 2058600 0 4223400 0 8776300 4561500 3382600 6276100 53574 1455 48102 449786;449787;449788;449789;449790;449791;449792;449793;449794 355501 355501 1 TSTAILSTGIGSLDK Unmodified 1462.7879 0.78788854 537 O75771 RAD51D DNA repair protein RAD51 homolog 4 yes yes 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 75.628 75.591 2 0.0084932 87354 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 38.634 30.102 5696600 0 0 0 0 2058000 0 1914700 0 0 0 0 0 1723900 0 0 53575 537 48103 449795;449796;449797 355502 355502 1 TSTAPAASPNVR Unmodified 1170.5993 0.59929991 951 P11498 PC Pyruvate carboxylase, mitochondrial yes yes 0 0 0 By MS/MS 10 0 1 1 20.11 20.73 2 0.0073886 20434 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.194 32.725 5599600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5599600 53576 951 48104 449798 355503 355503 1 TSTDVMDSQEALAFLK Oxidation (M) 1770.8346 0.83458074 2165 Q08AF3 SLFN5 Schlafen family member 5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 80.958 81.113 2 0.00015026 93638 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 70.488 56.069 19690000 0 0 0 0 0 0 5491100 0 0 5671900 8527300 0 0 0 0 53577 2165 48105 449799;449800;449801 355504;355505;355506 355505 3479 3 TSTDVMDSQEALAFLK Unmodified 1754.8397 0.83966612 2165 Q08AF3 SLFN5 Schlafen family member 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 86.672 86.764 2 3.9856E-15 100369 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 130.56 112.29 20892000 0 0 0 0 1119000 0 0 2911700 0 2703800 3246300 0 0 3412600 7498100 53578 2165 48105 449802;449803;449804;449805;449806;449807 355507;355508;355509;355510;355511 355508 5 TSTFQINGK Unmodified 994.50836 0.50835964 2195 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 32.757 32.777 2 0.012914 36048 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 60.59 33.988 13119000 0 0 0 0 2806100 3606700 3837000 0 0 0 2869200 0 0 0 0 53579 2195 48106 449808;449809;449810;449811 355512 355512 1 TSTGAPAAIK Unmodified 915.50255 0.50254598 1407 P40121 CAPG Macrophage-capping protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.83 1 2 7 2 1 1 1 1 1 1 1 1 19.723 18.854 2 0.0026685 19944 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 81.296 23.485 741910000 72709000 396180000 0 21935000 0 54155000 0 0 0 0 45036000 40146000 0 32856000 78896000 53580 1407 48107 449812;449813;449814;449815;449816;449817;449818;449819;449820;449821 355513;355514;355515;355516;355517;355518;355519;355520;355521;355522 355522 8 TSTGAPAAIKK Unmodified 1043.5975 0.597509 1407 P40121 CAPG Macrophage-capping protein yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 15.537 11.81 2 0.0037918 17354 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 119.07 67.332 63785000 43312000 20473000 0 0 0 0 0 0 0 0 0 0 0 0 0 53581 1407 48108 449822;449823 355523;355524 355524 0 TSTILAAAR Unmodified 902.51853 0.5185304 1347 P35249 RFC4 Replication factor C subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.494 36.675 2 2.2982E-05 38962 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 146.54 44.899 626510000 0 0 0 32597000 36478000 41383000 53092000 44424000 33292000 49914000 68559000 77582000 59916000 57892000 71379000 53582 1347 48109 449824;449825;449826;449827;449828;449829;449830;449831;449832;449833;449834;449835 355525;355526;355527;355528;355529;355530;355531;355532;355533;355534;355535;355536 355528 8 TSTILACAK Unmodified 963.50592 0.5059168 1424 P40937 RFC5 Replication factor C subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 32.271 32.517 2 0.013016 34141 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.436 46.279 186180000 0 0 0 0 8874800 12715000 10425000 0 11732000 15731000 22947000 40164000 18216000 14732000 30647000 53583 1424 48110 449836;449837;449838;449839;449840;449841;449842;449843;449844;449845 355537;355538;355539;355540;355541;355542 355538 6 TSTILGDITSIPELADYIK Unmodified 2049.0882 0.08815289 3735 Q96AC1 FERMT2 Fermitin family homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 4 1 2 1 100.65 95.666 2 2.2704E-40 118992 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 169.79 154.21 296420000 17091000 277780000 1547700 0 0 0 0 0 0 0 0 0 0 0 0 53584 3735 48111 449846;449847;449848;449849 355543;355544;355545;355546 355543 4 TSTLPPLPLPPLLPGDDDMDSPK Oxidation (M) 2431.2192 0.21924342 4752 Q9NYV4 CDK12 Cyclin-dependent kinase 12 yes yes 0 1 0 By MS/MS By matching 10 0 2 1 1 96.856 96.996 2 2.6387E-05 112768 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 46.746 41.763 6797800 0 0 0 0 0 0 0 0 0 3622600 0 0 0 0 3175200 53585 4752 48112 449850;449851 355547 355547 6131 1 TSTLQTVR Unmodified 904.49779 0.49779495 3348 Q8N5I9 C12orf45 Uncharacterized protein C12orf45 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 18.953 19.227 2 0.026168 18344 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.119 19.157 73879000 0 0 0 0 0 6420700 5762100 4581900 3704000 9851800 9866800 7400200 7290600 6090000 12910000 53586 3348 48113 449852;449853;449854;449855;449856;449857;449858;449859;449860;449861 355548;355549;355550;355551 355548 4 TSTMQDETLNSSVQSIR Unmodified 1895.8895 0.88946986 1322 P32519 ELF1 ETS-related transcription factor Elf-1 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 57.916 58.412 2 1.1037E-06 65765 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.362 65.42 8668700 0 0 0 0 0 0 0 0 0 0 4170100 0 0 0 4498600 53587 1322 48114 449862;449863;449864 355552;355553 355552 2 TSTPEDFIR Unmodified 1064.5138 0.51383895 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.939 53.082 2 0.0031269 60009 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 91.064 42.277 869820000 0 0 0 27094000 19653000 99507000 38585000 28362000 43462000 103120000 95967000 97825000 86128000 100490000 129640000 53588 5187 48115 449865;449866;449867;449868;449869;449870;449871;449872;449873;449874;449875;449876 355554;355555;355556;355557;355558;355559;355560;355561 355555 8 TSTPEDFIRMTK Unmodified 1424.697 0.69696505 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 1 By MS/MS By MS/MS 2.25 0.433 3 1 3 1 71.537 66.697 2;3 1.0879E-05 85147 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.97 91.347 685540000 0 602250000 83285000 0 0 0 0 0 0 0 0 0 0 0 0 53589 5187 48116 449877;449878;449879;449880 355562;355563;355564;355565 355562 2 TSTPEDFIRMTK Oxidation (M) 1440.6919 0.69187967 5187 Q9Y490 TLN1 Talin-1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2.67 0.471 1 2 1 1 1 57.215 52.542 3 0.0031283 66107 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 68.44 63.125 108190000 228380 39848000 68117000 0 0 0 0 0 0 0 0 0 0 0 0 53590 5187 48116 449881;449882;449883 355566;355567;355568;355569 355569 6572 4 TSTPFGSGR Unmodified 908.43519 0.4351947 3474 Q8TAP9 MPLKIP M-phase-specific PLK1-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 24.292 24.537 2 0.016625 25260 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 56.378 40.211 56630000 0 0 0 7801100 4619600 0 0 4125200 0 5381300 7206900 8757200 8255800 0 10483000 53591 3474 48117 449884;449885;449886;449887;449888;449889;449890;449891 355570;355571;355572;355573 355572 4 TSTPLAPLPVQSQSDTK Unmodified 1768.9207 0.92069363 3065 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.049 65.137 2 0.0031039 73787 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.511 31.934 83954000 0 0 0 5232400 5524700 5668600 7075500 5965200 5560100 6877900 10030000 7971800 7612900 6930500 9504200 53592 3065 48118 449892;449893;449894;449895;449896;449897;449898;449899;449900;449901;449902;449903 355574;355575;355576;355577;355578;355579;355580 355574 7 TSTPVIMEGVQEETDTR Unmodified 1891.8833 0.88332185 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 0 By MS/MS 10 0 1 1 67.508 68.025 2 0.0083165 77399 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.898 45.641 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53593 3443 48119 449904 355581 355581 1 TSTPVIMEGVQEETDTRDVK Unmodified 2234.0736 0.073641813 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.29 65.377 3 8.7482E-05 73985 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 50.883 46.696 90339000 0 0 0 4790900 4000500 4888500 6456600 8525900 5442700 9870300 10076000 7536400 6035900 8311800 14404000 53594 3443 48120 449905;449906;449907;449908;449909;449910;449911;449912;449913;449914;449915;449916 355582;355583;355584;355585;355586;355587;355588;355589;355590;355591;355592 355588 11 TSTPVIMEGVQEETDTRDVK Oxidation (M) 2250.0686 0.068556435 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 1 1 By MS/MS By MS/MS By matching 10 0 3 1 1 1 50.2 50.312 3 4.197E-06 56871 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 62.362 57.924 11206000 0 0 0 0 0 0 6476100 4730100 0 0 0 0 0 0 0 53595 3443 48120 449917;449918;449919 355593;355594 355593 4988 2 TSTSAVPNLFVPLNTNPK Unmodified 1899.0102 0.010177341 1361 P35611 ADD1 Alpha-adducin yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 85.764 85.831 2 8.6569E-27 99471 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 110.38 103.5 151410000 0 0 0 5457300 7965600 10319000 10179000 9968900 8727800 15645000 13884000 17494000 12258000 13511000 25995000 53596 1361 48121 449920;449921;449922;449923;449924;449925;449926;449927;449928;449929;449930;449931 355595;355596;355597;355598;355599;355600 355595 6 TSTSDLSRGEIGDPQTENPSTR Unmodified 2347.0888 0.088774606 2776 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 2 1 1 1 44.171 43.876 3 1.7257E-16 49902 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 70.453 49.253 18971000 0 0 0 3950400 3842900 0 0 0 0 11177000 0 0 0 0 0 53597 2776 48122 449932;449933;449934;449935;449936 355601;355602;355603;355604;355605 355604 4 TSTSNVEQYQAMVTSLEESLNK Oxidation (M) 2474.1483 0.14826332 965 P12270 TPR Nucleoprotein TPR yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 2 1 1 83.975 84.124 3 3.6689E-10 97538 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 64.87 61.138 43985000 0 0 0 0 0 0 0 0 0 12375000 17820000 8943200 0 4846400 0 53598 965 48123 449937;449938;449939;449940;449941 355606;355607;355608 355606 1273 3 TSTSNVEQYQAMVTSLEESLNK Unmodified 2458.1533 0.1533487 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 97.185 92.91 2;3 2.3602E-71 115199 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 205.66 179.13 295900000 0 295900000 0 0 0 0 0 0 0 0 0 0 0 0 0 53599 965 48123 449942;449943;449944 355609;355610;355611 355610 2 TSTTGSILNLNLDR Unmodified 1503.7893 0.78928553 5005 Q9ULU4 ZMYND8 Protein kinase C-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.422 78.479 2 0.00036353 89769 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 86.028 79.338 134640000 0 0 0 4917300 6188600 10656000 7179700 6883300 9976900 14982000 12107000 13690000 15002000 11714000 21341000 53600 5005 48124 449945;449946;449947;449948;449949;449950;449951;449952;449953;449954;449955;449956 355612;355613;355614;355615;355616;355617;355618;355619;355620;355621;355622;355623 355619 12 TSTTGVATTQSPTPR Unmodified 1503.7529 0.75290002 3573 Q8WWI1 LMO7 LIM domain only protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 25.238 25.44 2 1.0612E-112 25715 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 201.46 178.22 454010000 0 0 0 50089000 29974000 33354000 30302000 28533000 24810000 43041000 34397000 51212000 32980000 24532000 70788000 53601 3573 48125 449957;449958;449959;449960;449961;449962;449963;449964;449965;449966;449967;449968 355624;355625;355626;355627;355628;355629;355630;355631;355632;355633;355634;355635;355636;355637;355638 355633 15 TSTTSSMVASAEQPR Unmodified 1551.7199 0.71988533 1437 P41236;Q6NXS1 PPP1R2;PPP1R2P3 Protein phosphatase inhibitor 2;Protein phosphatase inhibitor 2-like protein 3 yes no 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.797 36.99 2 5.5473E-23 39645 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 146.16 146.16 113050000 0 0 0 4087800 4097000 3813400 0 4408700 1650300 6389000 18332000 18968000 8619000 10526000 32161000 53602 1437 48126 449969;449970;449971;449972;449973;449974;449975;449976;449977;449978;449979;449980 355639;355640;355641;355642;355643;355644;355645;355646;355647 355641 9 TSTTSSMVASAEQPR Oxidation (M) 1567.7148 0.71479996 1437 P41236;Q6NXS1 PPP1R2;PPP1R2P3 Protein phosphatase inhibitor 2;Protein phosphatase inhibitor 2-like protein 3 yes no 0 1 0 By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 2 2 20.867 21.419 2 0.0018832 20911 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.069 30.803 26212000 0 0 0 0 0 0 0 0 0 0 4232400 7291900 0 3329300 11358000 53603 1437 48126 449981;449982;449983;449984;449985;449986 355648;355649;355650 355648 2261 2 TSTTSSMVASAEQPRGNVDEELSK Unmodified 2523.1759 0.17587505 1437 P41236 PPP1R2 Protein phosphatase inhibitor 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 56.097 54.485 3 4.7001E-109 69877 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 164.58 156.69 690320000 54283000 476180000 18409000 0 2986100 5130400 3828900 5590700 0 8164500 25131000 23791000 0 21332000 45503000 53604 1437 48127 449987;449988;449989;449990;449991;449992;449993;449994;449995;449996;449997;449998;449999 355651;355652;355653;355654;355655;355656;355657;355658;355659;355660;355661;355662;355663;355664;355665;355666;355667;355668;355669;355670 355657 20 TSTTSSMVASAEQPRGNVDEELSK Oxidation (M) 2539.1708 0.17078968 1437 P41236 PPP1R2 Protein phosphatase inhibitor 2 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS 6.56 3.86 3 1 5 1 2 1 1 1 1 1 1 44.475 42.219 3 1.4171E-68 54313 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 137.42 130.32 263910000 14138000 196140000 11890000 0 0 0 0 0 2207600 3228500 22267000 0 0 5290700 8747500 53605 1437 48127 450000;450001;450002;450003;450004;450005;450006;450007;450008 355671;355672;355673;355674;355675;355676 355671 2261 6 TSTVDLPIENQLLWQIDREMLNLYIENEGK Unmodified 3573.8025 0.80249934 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 0 1 By MS/MS 3 0 1 1 102.33 98.773 3 0.015775 118716 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 21.317 15.998 2302700 0 2302700 0 0 0 0 0 0 0 0 0 0 0 0 0 53606 1337 48128 450009 355677 355677 1 TSTVSADLANLLK Unmodified 1331.7296 0.72964538 5286 Q9Y6J0 CABIN1 Calcineurin-binding protein cabin-1 yes yes 0 0 0 By MS/MS 2 0 1 1 91.218 86.307 2 0.0020978 107277 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.008 62.231 14139000 0 14139000 0 0 0 0 0 0 0 0 0 0 0 0 0 53607 5286 48129 450010 355678 355678 1 TSTVSTAHASK Unmodified 1088.5462 0.54620171 3187 Q86X10 RALGAPB Ral GTPase-activating protein subunit beta yes yes 0 0 0 By MS/MS By MS/MS By matching 2 0 3 1 1 1 6.0761 3.1168 2 5.165E-09 5872 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 127.94 67.467 114180000 49992000 60560000 3624900 0 0 0 0 0 0 0 0 0 0 0 0 53608 3187 48130 450011;450012;450013 355679 355679 1 TSVAASLYHTPSDSK Unmodified 1562.7577 0.75765105 3078 Q7Z333 SETX Probable helicase senataxin yes yes 0 0 0 By MS/MS 2 0 1 1 49.855 41.954 3 1.2738E-16 58186 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 119.17 106.34 44318000 44318000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53609 3078 48131 450014 355680 355680 1 TSVDEITSGK Unmodified 1035.5084 0.50841922 2698 Q53EZ4 CEP55 Centrosomal protein of 55 kDa yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 28.306 28.444 2 0.0088455 30565 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 59.052 41.144 40482000 0 0 0 6712800 0 0 0 10138000 0 0 0 0 12758000 10873000 0 53610 2698 48132 450015;450016;450017;450018 355681;355682;355683;355684 355683 4 TSVESVGTMR Unmodified 1065.5125 0.51245874 2250 Q13188 STK3 Serine/threonine-protein kinase 3;Serine/threonine-protein kinase 3 36kDa subunit;Serine/threonine-protein kinase 3 20kDa subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 31.702 31.432 2 0.010746 34065 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 55.461 35.008 76169000 0 9261600 0 4013500 3256700 6418000 3224600 5801700 2538300 5721900 7768700 0 7717500 7894000 12553000 53611 2250 48133 450019;450020;450021;450022;450023;450024;450025;450026;450027;450028;450029;450030;450031 355685;355686;355687;355688;355689;355690;355691;355692;355693;355694 355690 9 TSVETALR Unmodified 875.47125 0.47124585 1524 P47755 CAPZA2 F-actin-capping protein subunit alpha-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.749 28.944 2 0.0081134 30737 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 87.323 69.474 229170000 0 0 0 18624000 15065000 15278000 15232000 13795000 13145000 15663000 25364000 25362000 18861000 18617000 34160000 53612 1524 48134 450032;450033;450034;450035;450036;450037;450038;450039;450040;450041;450042;450043 355695;355696;355697;355698 355697 4 TSVLAAANPIESQWNPK Unmodified 1824.937 0.9370124 1332 P33991 MCM4 DNA replication licensing factor MCM4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.107 80.165 2 2.5239E-70 92865 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 203.11 173.18 161550000 0 0 0 2540900 5627000 11082000 7248900 10272000 7920800 17205000 17628000 18455000 8145400 13570000 41854000 53613 1332 48135 450044;450045;450046;450047;450048;450049;450050;450051;450052;450053;450054;450055 355699;355700;355701;355702;355703;355704;355705;355706;355707;355708;355709;355710 355708 12 TSVLLEQMMRK 2 Oxidation (M) 1366.6949 0.69485656 4490 Q9HAU5 UPF2 Regulator of nonsense transcripts 2 yes yes 0 2 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 32.403 32.567 2 0.0094951 35594 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 51.059 40.602 86532000 0 0 0 10077000 3765900 9458100 3000500 4981900 0 7337100 0 16693000 22712000 3997500 4508700 53614 4490 48136 450056;450057;450058;450059;450060;450061;450062;450063;450064;450065 355711 355711 5919;5920 0 TSVPAPLNSCLLK Unmodified 1398.7541 0.754086 4973 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.352 76.398 2 0.012182 88024 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 41.283 28.493 106220000 0 0 0 5298800 3569300 7068300 3958600 0 9524000 7725700 11329000 17677000 14638000 12371000 13062000 53615 4973 48137 450066;450067;450068;450069;450070;450071;450072;450073;450074;450075;450076 355712;355713;355714;355715;355716;355717 355713 6 TSVPENHAQSR Unmodified 1224.5847 0.58471248 5066 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.8943 7.0179 2 0.015235 5208 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 61.78 48.66 90197000 0 0 0 2826900 5402600 5998200 5718800 6016800 7732200 6791100 7975200 8570200 9459700 8559200 15146000 53616 5066 48138 450077;450078;450079;450080;450081;450082;450083;450084;450085;450086;450087;450088 355718;355719;355720;355721;355722 355720 3 TSVPSPEQPQPYR Unmodified 1484.726 0.72595699 3516 Q8TEH3 DENND1A DENN domain-containing protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 42.88 42.848 2 0.034206 48595 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 35.652 17.788 30340000 0 0 0 6135600 0 0 0 13114000 0 0 0 0 0 11090000 0 53617 3516 48139 450089;450090;450091 355723 355723 1 TSVPVLDAELFIPPK Unmodified 1624.9076 0.90760975 624 O95163 IKBKAP Elongator complex protein 1 yes yes 0 0 0 By MS/MS 3 0 1 1 96.022 92.745 2 0.0025182 111271 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 76.655 66.423 7282300 0 7282300 0 0 0 0 0 0 0 0 0 0 0 0 0 53618 624 48140 450092 355724;355725 355725 2 TSVQFQNFSPTVVHPGDLQTQLAVQTK Unmodified 2969.5247 0.52468499 689 O95782 AP2A1 AP-2 complex subunit alpha-1 yes yes 0 0 0 By MS/MS 2 0 1 1 89.004 80.874 3 2.0902E-29 105134 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.468 83.964 12007000 12007000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53619 689 48141 450093 355726 355726 1 TSVQTEDDQLIAGQSAR Unmodified 1817.8755 0.87553435 1340;1200 P35221;P26232 CTNNA1;CTNNA2 Catenin alpha-1;Catenin alpha-2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 1 2 2 2 48.634 48.768 2;3 0 54577 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 271.56 229.85 921150000 0 0 0 55546000 45733000 89822000 56001000 51164000 57473000 85221000 106250000 104060000 76838000 66536000 126500000 53620 1340;1200 48142 450094;450095;450096;450097;450098;450099;450100;450101;450102;450103;450104;450105;450106;450107;450108;450109;450110;450111;450112;450113;450114;450115;450116 355727;355728;355729;355730;355731;355732;355733;355734;355735;355736;355737;355738;355739;355740;355741 355737 13 TSVSPAPDK Unmodified 900.45526 0.45526144 485 O75362 ZNF217 Zinc finger protein 217 yes yes 0 0 0 By matching By matching By MS/MS By matching 10 0 4 1 1 1 1 10.816 10.97 2 0.013293 10003 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 60.019 30.681 7947600 0 0 0 748580 0 0 0 0 0 0 0 3354100 2382700 1462200 0 53621 485 48143 450117;450118;450119;450120 355742 355742 1 TSVTDFLR Unmodified 937.4869 0.48689592 3277 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 70.855 70.991 2 0.030437 81760 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 55.531 37.545 68335000 0 0 0 0 5449900 7149100 5186500 4359100 3963300 6810600 6756400 6830700 7530900 6032600 8265700 53622 3277 48144 450121;450122;450123;450124;450125;450126;450127;450128;450129;450130;450131 355743;355744;355745 355745 3 TSVTRSEIIDEK Acetyl (Protein N-term) 1418.7253 0.72528829 4388 Q9H410 DSN1 Kinetochore-associated protein DSN1 homolog yes yes 1 0 1 By MS/MS 2.5 0.5 1 1 2 53.518 48.178 2 0.00032965 62190 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.611 50.735 32108000 0 32108000 0 0 0 0 0 0 0 0 0 0 0 0 0 53623 4388 48145 450132;450133 355746;355747;355748 355747 3 TSYAQHQQVR Unmodified 1216.5949 0.59488324 1842 P61247 RPS3A 40S ribosomal protein S3a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 2 2 1 2 2 2 2 2 2 7.9957 8.1036 2;3 1.1678E-16 5864 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 169.09 130.07 1888900000 0 0 0 107970000 117280000 140080000 104060000 94196000 137360000 206970000 0 271860000 322440000 199050000 187640000 53624 1842 48146 450134;450135;450136;450137;450138;450139;450140;450141;450142;450143;450144;450145;450146;450147;450148;450149;450150;450151;450152;450153;450154 355749;355750;355751;355752;355753;355754;355755;355756;355757;355758;355759;355760;355761;355762;355763;355764;355765;355766 355751 13 TSYEEFTHK Unmodified 1140.5088 0.50875357 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 2 2 2 1 2 2 2 1 3 2 2 28.662 28.856 2;3 0.0032704 30701 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 90.601 77.604 405040000 0 0 0 17655000 23449000 26656000 24448000 18834000 22534000 44128000 50177000 43006000 46268000 38586000 49296000 53625 2930 48147 450155;450156;450157;450158;450159;450160;450161;450162;450163;450164;450165;450166;450167;450168;450169;450170;450171;450172;450173;450174;450175;450176 355767;355768;355769;355770;355771;355772;355773;355774;355775;355776;355777;355778;355779;355780;355781;355782;355783;355784 355776 14 TSYEPFHPGPSPVDHDSLESK Unmodified 2325.055 0.054955282 488 O75376 NCOR1 Nuclear receptor corepressor 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 57.585 57.986 4 0.023832 65311 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 12.898 11.9 21965000 0 0 0 0 0 0 0 0 0 0 0 0 0 7557300 14407000 53626 488 48148 450177;450178 355785 355785 1 TSYFLCYEPPTIK Unmodified 1617.7749 0.77488102 2943 Q6PCE3 PGM2L1 Glucose 1,6-bisphosphate synthase yes yes 0 0 0 By MS/MS 2 0 1 1 87.555 79.425 2 0.040649 103514 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.419 33.414 7144000 7144000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53627 2943 48149 450179 355786 355786 1 TSYLTELIDR Unmodified 1209.6241 0.62411768 4811;5279 Q9P289;Q9Y6E0 STK26;STK24 Serine/threonine-protein kinase 26;Serine/threonine-protein kinase 24;Serine/threonine-protein kinase 24 36 kDa subunit;Serine/threonine-protein kinase 24 12 kDa subunit no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 81.136 81.182 2 0.0017911 93884 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 101.65 66.351 118010000 0 0 0 3640100 5559000 18047000 9191700 8664300 6518000 17070000 16028000 14613000 7604400 11076000 0 53628 4811;5279 48150 450180;450181;450182;450183;450184;450185;450186;450187;450188;450189;450190 355787;355788;355789;355790 355787 4 TSYQPSSPGR Unmodified 1078.5043 0.5043369 2370 Q14134 TRIM29 Tripartite motif-containing protein 29 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.532 16.68 2 0.0013138 16521 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 107.69 92.031 83909000 0 0 0 8616600 5687500 5721200 6064600 10386000 3992800 7749800 7522300 13354000 7350100 7463500 0 53629 2370 48151 450191;450192;450193;450194;450195;450196;450197;450198;450199;450200;450201;450202 355791;355792;355793;355794;355795;355796;355797;355798;355799;355800;355801 355797 9 TTAAFQQGK Unmodified 950.48214 0.48214489 880 P09234 SNRPC U1 small nuclear ribonucleoprotein C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 2 13.352 13.431 2 0.0032393 12604 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 123.69 99.487 295030000 0 0 0 22232000 19196000 21192000 35365000 23496000 27066000 39409000 0 74431000 32646000 0 0 53630 880 48152 450203;450204;450205;450206;450207;450208;450209;450210;450211;450212;450213;450214;450215;450216 355802;355803;355804;355805;355806;355807;355808;355809;355810;355811;355812;355813;355814;355815;355816;355817 355803 16 TTAAHSLVGTPYYMSPER Unmodified 1979.9411 0.9411115 3508 Q8TDX7 NEK7 Serine/threonine-protein kinase Nek7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 63.057 63.303 3 2.0477E-15 71631 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.208 86.627 104150000 0 0 0 0 0 11836000 0 11613000 5742000 13055000 12695000 11383000 8633000 12580000 16617000 53631 3508 48153 450217;450218;450219;450220;450221;450222;450223;450224;450225 355818;355819;355820;355821;355822;355823;355824;355825;355826;355827 355821 10 TTAAHTQSFK Unmodified 1090.5407 0.5407224 3241 Q8IWI9 MGA MAX gene-associated protein yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 10.62 7.5619 2 4.9308E-12 11880 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 179.81 119.01 11913000 10663000 0 1249900 0 0 0 0 0 0 0 0 0 0 0 0 53632 3241 48154 450226;450227 355828 355828 1 TTAARPTFEPAR Acetyl (Protein N-term) 1358.6943 0.69426293 4786 Q9P013 CWC15 Spliceosome-associated protein CWC15 homolog yes yes 1 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 46.001 46.118 2 0.0010127 51588 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 64.103 31.58 219700000 0 0 0 11387000 12409000 14694000 11060000 17373000 10875000 18298000 34125000 37815000 26589000 25073000 0 53633 4786 48155 450228;450229;450230;450231;450232;450233;450234;450235;450236;450237;450238 355829;355830;355831;355832;355833;355834;355835;355836 355832 8 TTADDSLPVLLEHRK Unmodified 1693.8999 0.89989861 481 O75342 ALOX12B Arachidonate 12-lipoxygenase, 12R-type yes yes 0 0 1 By MS/MS By matching 10 0 2 1 1 63.623 63.357 4 0.0033455 73211 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 33.842 24.042 14679000 0 0 0 11742000 0 0 0 0 0 0 0 0 2937700 0 0 53634 481 48156 450239;450240 355837 355837 1 TTAEDGVPAPPLLDPIVQQFGQFSK Unmodified 2654.3592 0.35918279 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 0 0 By MS/MS 3 0 1 1 99.409 96 3 0.015089 115191 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 23.246 15.624 3472600 0 3472600 0 0 0 0 0 0 0 0 0 0 0 0 0 53635 4139 48157 450241 355838 355838 1 TTAENEFVMLK Oxidation (M) 1297.6224 0.62240312 74 CON__P13647;P13647 KRT5 Keratin, type II cytoskeletal 5 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.486 58.601 2 7.0708E-28 66482 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 172.23 157.56 + 1366800000 0 0 0 204750000 101500000 84952000 69579000 209000000 103520000 97550000 87067000 124940000 195850000 58383000 29703000 53636 74 48158 450242;450243;450244;450245;450246;450247;450248;450249;450250;450251;450252;450253 355839;355840;355841;355842;355843;355844;355845;355846;355847;355848;355849;355850;355851;355852 355840 103 14 TTAENEFVMLK Unmodified 1281.6275 0.6274885 74 CON__P13647;P13647 KRT5 Keratin, type II cytoskeletal 5 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.789 68.868 2 0.00049528 78833 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 98.033 79.253 + 724380000 0 0 0 78611000 36269000 36415000 27288000 181380000 31888000 59568000 58270000 90973000 64473000 36439000 22806000 53637 74 48158 450254;450255;450256;450257;450258;450259;450260;450261;450262;450263;450264;450265 355853;355854;355855;355856;355857;355858;355859;355860;355861;355862;355863;355864 355854 12 TTAENEFVMLKK Unmodified 1409.7225 0.72245152 74 CON__P13647;P13647 KRT5 Keratin, type II cytoskeletal 5 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 54.425 54.566 3 0.0016548 61544 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 55.261 51.088 + 340050000 0 0 0 56536000 18953000 0 24000000 95234000 3462900 14095000 16844000 80337000 13114000 9005700 8469900 53638 74 48159 450266;450267;450268;450269;450270;450271;450272;450273;450274;450275;450276 355865;355866;355867;355868;355869;355870;355871;355872;355873 355865 6 TTAENEFVMLKK Oxidation (M) 1425.7174 0.71736614 74 CON__P13647;P13647 KRT5 Keratin, type II cytoskeletal 5 no no 0 1 1 By MS/MS By MS/MS 10 0 4 2 2 46.881 46.67 2;3 0.00030441 53307 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 111.61 81.44 + 270930000 0 0 0 135540000 0 0 0 135380000 0 0 0 0 0 0 0 53639 74 48159 450277;450278;450279;450280 355874;355875;355876 355876 103 3 TTAGDIDIELWSK Unmodified 1447.7195 0.71947463 2982 Q6UX04 CWC27 Peptidyl-prolyl cis-trans isomerase CWC27 homolog yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 84.989 81.38 2 0.0021272 101029 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.522 64.298 17143000 0 15665000 1477500 0 0 0 0 0 0 0 0 0 0 0 0 53640 2982 48160 450281;450282 355877 355877 1 TTAGSVDWTDQLGLR Unmodified 1618.7951 0.79509919 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 79.824 79.865 2 2.0565E-07 92433 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 115.33 98.413 93058000 0 0 0 3791000 6255800 7839000 6327900 8023200 9037000 0 0 13686000 6331100 9704400 22062000 53641 4285 48161 450283;450284;450285;450286;450287;450288;450289;450290;450291;450292 355878;355879;355880;355881;355882;355883;355884;355885;355886 355884 9 TTANAIYCPPK Unmodified 1234.6016 0.6016081 129 O00231 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 0 0 0 By MS/MS 10 0 1 1 38.687 38.846 2 1.698E-05 43263 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 157.91 142.76 26554000 0 0 0 0 0 0 0 0 0 26554000 0 0 0 0 0 53642 129 48162 450293 355887 355887 1 TTANCGAHDELDFK Acetyl (Protein N-term) 1619.6886 0.68858521 2216 Q12968 NFATC3 Nuclear factor of activated T-cells, cytoplasmic 3 yes yes 1 0 0 By MS/MS 2 0 1 1 56.315 50.5 2 6.8599E-14 65227 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 157.56 139.69 22735000 0 22735000 0 0 0 0 0 0 0 0 0 0 0 0 0 53643 2216 48163 450294 355888 355888 0 TTANPVYSGAVFEPER Unmodified 1736.837 0.836964 3755 Q96BD5 PHF21A PHD finger protein 21A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.898 69.974 2 1.7484E-23 80272 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 120.84 104.58 145660000 0 0 0 8565800 10034000 8319900 8148900 13550000 9117500 12049000 13322000 21467000 13759000 12593000 14734000 53644 3755 48164 450295;450296;450297;450298;450299;450300;450301;450302;450303;450304;450305;450306 355889;355890;355891;355892;355893;355894;355895;355896;355897;355898;355899;355900;355901;355902 355895 14 TTANPVYSGAVFEPERK Unmodified 1864.9319 0.93192702 3755 Q96BD5 PHF21A PHD finger protein 21A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 60.401 60.49 3 0.00012525 69083 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 49.993 32.031 21618000 0 0 0 0 0 12467000 0 0 9151500 0 0 0 0 0 0 53645 3755 48165 450307;450308;450309 355903;355904;355905;355906 355903 4 TTAPVPEPTKPGDPR Unmodified 1561.81 0.81002097 3167 Q86VM9 ZC3H18 Zinc finger CCCH domain-containing protein 18 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.557 35.739 3 0.014818 39763 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 25.866 22.97 344800000 0 0 0 22419000 20131000 15218000 23797000 28555000 19325000 28080000 33068000 42533000 33331000 36312000 42025000 53646 3167 48166 450310;450311;450312;450313;450314;450315;450316;450317;450318;450319;450320;450321 355907;355908 355908 2 TTARDQDLEPGAPSMGAK Unmodified 1843.8734 0.87342586 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 38.81 37.677 3 0.00067361 41579 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 30.881 23.645 1245100000 59880000 656240000 25498000 18560000 20541000 43767000 38024000 36183000 27177000 50818000 51741000 40355000 49962000 48827000 77519000 53647 848 48167 450322;450323;450324;450325;450326;450327;450328;450329;450330;450331;450332;450333;450334;450335;450336;450337 355909;355910;355911;355912;355913;355914;355915;355916;355917;355918;355919;355920;355921;355922;355923;355924;355925;355926;355927;355928 355919 19 TTARDQDLEPGAPSMGAK Oxidation (M) 1859.8683 0.86834049 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 1 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 30.053 25.234 3 0.00012567 33056 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.261 61.68 359420000 41203000 318220000 0 0 0 0 0 0 0 0 0 0 0 0 0 53648 848 48167 450338;450339;450340 355929;355930;355931 355929 1052 2 TTASEPVEQSEATSK Unmodified 1563.7264 0.7264105 2470 Q15007 WTAP Pre-mRNA-splicing regulator WTAP yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.357 19.553 2 1.5299E-59 18690 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 176.8 167.61 184530000 0 0 0 14115000 11869000 13089000 14636000 13121000 11071000 16195000 17152000 22359000 16823000 14782000 19314000 53649 2470 48168 450341;450342;450343;450344;450345;450346;450347;450348;450349;450350;450351;450352 355932;355933;355934;355935;355936;355937;355938;355939;355940;355941;355942 355934 11 TTASTQMNVQSSR Unmodified 1409.6569 0.65689115 3101 Q7Z4S6;O75037 KIF21A;KIF21B Kinesin-like protein KIF21A;Kinesin-like protein KIF21B yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.078 20.279 2 7.5427E-13 20491 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 133.81 129.36 72666000 0 0 0 3943300 3602200 5276600 3513600 4873100 2595100 8756900 10332000 8557200 6551100 4375600 10289000 53650 3101 48169 450353;450354;450355;450356;450357;450358;450359;450360;450361;450362;450363;450364 355943;355944;355945;355946;355947;355948;355949;355950;355951;355952 355947 10 TTASTQMNVQSSR Oxidation (M) 1425.6518 0.65180577 3101 Q7Z4S6;O75037 KIF21A;KIF21B Kinesin-like protein KIF21A;Kinesin-like protein KIF21B yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 8.4564 8.4473 2 0.00034369 6783 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 78.653 74.201 11632000 0 0 0 2191300 2007500 0 2087600 0 0 0 0 5346100 0 0 0 53651 3101 48169 450365;450366;450367;450368;450369;450370 355953;355954;355955;355956 355956 4713 4 TTASTSQVR Acetyl (Protein N-term) 991.49344 0.49343786 766 P02794 FTH1 Ferritin heavy chain;Ferritin heavy chain, N-terminally processed yes yes 1 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 18.08 18.403 2 0.01027 17388 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.603 30.507 47706000 0 0 0 5049300 0 0 0 0 0 0 0 18304000 0 0 24352000 53652 766 48170 450371;450372;450373 355957;355958 355957 2 TTASVLPNQVSVITK Unmodified 1556.8774 0.87737225 5099 Q9Y2F5 ICE1 Little elongation complex subunit 1 yes yes 0 0 0 By MS/MS 2 0 1 1 77.617 72.842 2 0.017011 90867 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 51.774 36.802 15289000 0 15289000 0 0 0 0 0 0 0 0 0 0 0 0 0 53653 5099 48171 450374 355959;355960 355959 2 TTATVDTYESLLSDSNSNQSR Unmodified 2288.0404 0.040427429 2830 Q5VZ89 DENND4C DENN domain-containing protein 4C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 2 1 2 1 1 1 1 1 1 1 1 75.498 75.505 2;3 2.3222E-97 87203 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 203.85 190.72 114710000 0 0 0 7383200 8651700 15230000 7437500 10652000 9452500 11050000 11949000 14320000 0 6308900 12275000 53654 2830 48172 450375;450376;450377;450378;450379;450380;450381;450382;450383;450384;450385;450386;450387 355961;355962;355963;355964;355965;355966;355967;355968;355969;355970;355971 355970 10 TTATVDTYESLLSDSNSNQSRDLK Unmodified 2644.2464 0.24639746 2830 Q5VZ89 DENND4C DENN domain-containing protein 4C yes yes 0 0 1 By MS/MS 2 0 1 1 79.199 74.464 3 4.6094E-57 92702 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.77 121.79 68744000 0 68744000 0 0 0 0 0 0 0 0 0 0 0 0 0 53655 2830 48173 450388 355972 355972 1 TTCMSSQGSDDEQIK Unmodified 1685.6873 0.68726458 4799 Q9P0V9 SEPT10 Septin-10 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 22.769 23.124 2 4.7777E-11 23705 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 97.911 86.045 21217000 0 0 0 0 0 1923900 0 1911000 0 3151100 5775900 4076600 0 0 4378400 53656 4799 48174 450389;450390;450391;450392;450393;450394 355973 355973 1 TTCSCSLAVQLSK Unmodified 1453.6905 0.69049946 353 O43681 ASNA1 ATPase ASNA1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 58.348 52.517 2 1.1451E-08 67645 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.89 120.46 164690000 0 164690000 0 0 0 0 0 0 0 0 0 0 0 0 0 53657 353 48175 450395;450396 355974;355975 355974 1 TTCSRQFTSSSSMK Acetyl (Protein N-term);Oxidation (M) 1664.7134 0.71341975 56;70 CON__P02533;P02533;CON__P08779;P08779 KRT14;KRT16 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16 no no 1 1 1 By MS/MS 2.5 0.5 1 1 2 28.152 23.857 2 0.00062249 31193 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.439 53.829 + 8636400 0 8636400 0 0 0 0 0 0 0 0 0 0 0 0 0 53658 56;70 48176 450397;450398 355976 355976 60 1 TTDDTTTDNYIAQGK Unmodified 1642.7322 0.73222416 3072 Q7Z2T5 TRMT1L TRMT1-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 32.62 32.866 2 1.0547E-26 35512 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 159.94 146.5 58638000 0 0 0 0 3085700 5694600 4105100 0 2497300 5214800 7272100 9559500 4937500 5091400 11180000 53659 3072 48177 450399;450400;450401;450402;450403;450404;450405;450406;450407;450408 355977;355978;355979;355980;355981;355982;355983;355984;355985;355986 355985 10 TTDEEFQSLK Unmodified 1196.5561 0.55609769 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 41.086 41.283 2 0.00046163 46163 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 155.07 102.35 111650000 0 0 0 0 8576600 14316000 9009300 11647000 0 11344000 13694000 0 15308000 9730500 18024000 53660 2291 48178 450409;450410;450411;450412;450413;450414;450415;450416;450417 355987;355988;355989;355990;355991;355992;355993;355994 355992 8 TTDFHNPGYPK Unmodified 1275.5884 0.58840088 4398 Q9H4H8 FAM83D Protein FAM83D yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.957 32.143 3 0.0020851 35022 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 64.297 48.758 98248000 0 0 0 5419300 6670500 8170700 7049300 7786400 6178100 8912700 9468100 9557500 13473000 5727300 9835000 53661 4398 48179 450418;450419;450420;450421;450422;450423;450424;450425;450426;450427;450428;450429 355995;355996;355997;355998;355999;356000 355997 6 TTDGVYEGVAIGGDR Unmodified 1508.7107 0.71070086 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 55.328 55.382 2 6.0867E-35 62471 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 184.55 171.46 209190000 0 0 0 8950900 14068000 11578000 42192000 38567000 40089000 9933600 14519000 29297000 0 0 0 53662 1714 48180 450430;450431;450432;450433;450434;450435;450436;450437;450438 356001;356002;356003;356004;356005;356006;356007;356008;356009 356004 8 TTDGYLLR Unmodified 937.4869 0.48689592 1842 P61247 RPS3A 40S ribosomal protein S3a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.09 43.265 2 0.0045271 48661 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 110.34 76.822 429640000 0 0 0 25779000 29294000 26697000 34128000 31893000 17385000 37509000 42712000 54536000 38240000 39056000 52412000 53663 1842 48181 450439;450440;450441;450442;450443;450444;450445;450446;450447;450448;450449;450450 356010;356011;356012;356013;356014;356015;356016;356017;356018;356019;356020;356021;356022 356011 10 TTDIVIR Unmodified 816.47052 0.47051757 4287 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 36.286 36.413 2 0.043233 39851 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 67.344 21.392 97393000 0 0 0 6039000 5829200 10040000 9447900 0 5976600 11490000 11447000 15039000 12390000 9692000 0 53664 4287 48182 450451;450452;450453;450454;450455;450456;450457;450458;450459;450460 356023 356023 1 TTDLLTDWEK Unmodified 1220.5925 0.5924832 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 76.508 76.199 2 1.0687E-05 94467 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 153.24 87.998 373250000 0 55246000 0 14313000 16652000 25942000 19090000 23767000 16453000 29164000 25791000 45596000 19709000 28466000 53057000 53665 2392 48183 450461;450462;450463;450464;450465;450466;450467;450468;450469;450470;450471;450472;450473 356024;356025;356026;356027;356028;356029;356030;356031;356032;356033;356034;356035 356028 12 TTDLSIQPASTDLK Unmodified 1488.7672 0.7671531 3226 Q8IVF2 AHNAK2 Protein AHNAK2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.753 60.857 2 1.1763E-11 68745 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.55 68.03 56982000 0 0 0 3860600 2580600 3624300 4158000 4511400 3370000 3732300 5182100 7177800 5803700 4171300 8810300 53666 3226 48184 450474;450475;450476;450477;450478;450479;450480;450481;450482;450483;450484;450485 356036;356037;356038;356039;356040;356041;356042;356043;356044;356045;356046 356038 11 TTDLSIQPLSADVK Unmodified 1486.7879 0.78788854 3226 Q8IVF2 AHNAK2 Protein AHNAK2 yes yes 0 0 0 By MS/MS 2 0 1 1 78.247 73.472 2 5.6598E-22 91654 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.78 116.44 56909000 0 56909000 0 0 0 0 0 0 0 0 0 0 0 0 0 53667 3226 48185 450486 356047 356047 0 TTDLSIQPPSADLK Unmodified 1484.7722 0.77223848 3226 Q8IVF2 AHNAK2 Protein AHNAK2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 70.05 69.606 2 0.0018867 87000 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.189 41.326 51426000 0 21637000 0 1592600 1954200 1994800 2486500 2305900 0 3146900 3654500 4571700 4455200 3626200 0 53668 3226 48186 450487;450488;450489;450490;450491;450492;450493;450494;450495;450496;450497 356048;356049;356050;356051 356050 4 TTDMAPSK Oxidation (M) 865.38513 0.38513296 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 1 0 By MS/MS 1 0 1 1 106.73 111.99 2 0.012485 92734 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 95.909 72.386 73622000 73622000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53669 1226 48187 450498 356052 356052 1814 1 TTDRYIQQK Unmodified 1151.5935 0.59348625 583 O94776 MTA2 Metastasis-associated protein MTA2 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS 3.33 2.98 5 1 3 1 1 1 13.035 10.828 2;3 5.3104E-12 14693 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 206.03 104.62 1002000000 884260000 48766000 51440000 0 0 0 0 0 0 0 17499000 0 0 0 0 53670 583 48188 450499;450500;450501;450502;450503;450504 356053;356054;356055 356053 0 TTDRYVQQK Unmodified 1137.5778 0.57783619 2272;4140 Q13330;Q9BTC8 MTA1;MTA3 Metastasis-associated protein MTA1;Metastasis-associated protein MTA3 no no 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 8.973 5.8874 2 0.013532 8481 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.98 62.416 59707000 23908000 23356000 12442000 0 0 0 0 0 0 0 0 0 0 0 0 53671 2272;4140 48189 450505;450506;450507 356056 356056 0 TTDTASVQNEAK Unmodified 1263.5943 0.59427411 5008 Q9ULV4 CORO1C Coronin-1C yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.34 1 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 19.886 19.866 2 1.1026E-77 92571 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 265.58 206.6 583510000 163320000 43727000 0 17860000 16636000 27299000 14269000 13051000 12743000 31681000 40264000 44259000 23316000 25602000 109490000 53672 5008 48190 450508;450509;450510;450511;450512;450513;450514;450515;450516;450517;450518;450519;450520;450521;450522 356057;356058;356059;356060;356061;356062;356063;356064;356065;356066;356067;356068;356069;356070 356063 14 TTDVEGRLSALLQETK Unmodified 1759.9316 0.93159267 430 O60763 USO1 General vesicular transport factor p115 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 88.441 81.954 3 0.0051689 103872 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 46.156 27.792 114220000 20819000 93400000 0 0 0 0 0 0 0 0 0 0 0 0 0 53673 430 48191 450523;450524 356071;356072 356071 2 TTEAEEVFVPVLNIK Unmodified 1687.9033 0.90325265 3137 Q86TP1 PRUNE Protein prune homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 90.937 89.672 2 2.0662E-50 111964 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 165.63 138.66 255390000 5773700 219300000 2023600 0 1514800 3118400 1258100 0 1508200 4665100 3146200 2839100 1390200 2203100 6643300 53674 3137 48192 450525;450526;450527;450528;450529;450530;450531;450532;450533;450534;450535;450536;450537;450538 356073;356074;356075;356076;356077;356078;356079;356080;356081;356082 356075 10 TTECSNTFK Unmodified 1086.4652 0.4651742 2658 Q2TAY7 SMU1 WD40 repeat-containing protein SMU1;WD40 repeat-containing protein SMU1, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 14.596 10.914 2 0.013195 14696 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.42 92.546 72821000 16555000 56266000 0 0 0 0 0 0 0 0 0 0 0 0 0 53675 2658 48193 450539;450540 356083;356084 356083 1 TTEDIIR Unmodified 846.4447 0.44469675 4538 Q9NP74 PALMD Palmdelphin yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 27.544 27.756 2 0.030779 28534 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.423 17.881 83830000 0 0 0 5726400 4904100 0 6116000 0 5116100 0 12005000 16799000 0 10117000 23046000 53676 4538 48194 450541;450542;450543;450544;450545;450546;450547;450548 356085;356086 356085 2 TTEELNEALSAK Unmodified 1304.646 0.64597533 3174 Q86VS8 HOOK3 Protein Hook homolog 3 yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 47.741 47.851 2 0.00070717 52979 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 75.652 50.729 39500000 0 0 0 3101800 2389400 0 3996800 0 3291600 6082600 5173900 6160800 4938200 4364700 0 53677 3174 48195 450549;450550;450551;450552;450553;450554;450555;450556;450557;450558 356087;356088;356089;356090 356088 4 TTEENQELVTR Unmodified 1318.6365 0.63647328 2849 Q676U5 ATG16L1 Autophagy-related protein 16-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 25.335 25.575 2 1.469E-05 25955 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 135.55 87.974 62816000 0 0 0 0 4543100 5606300 4607300 3407900 2888700 6213900 4284700 12809000 3712900 4612900 10130000 53678 2849 48196 450559;450560;450561;450562;450563;450564;450565;450566;450567;450568;450569 356091;356092;356093;356094;356095;356096;356097;356098;356099;356100;356101 356094 10 TTEEQVQASTPCPR Unmodified 1602.7308 0.73078437 2372 Q14137 BOP1 Ribosome biogenesis protein BOP1 yes yes 0 0 0 By MS/MS 10 0 1 1 30.731 30.77 2 0.0046563 33480 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 60.434 50.202 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53679 2372 48197 450570 356102 356102 1 TTEETSKPKDD Unmodified 1249.5674 0.56739066 1113 P20810 CAST Calpastatin yes yes 0 0 2 By MS/MS 2.33 0.471 2 1 3 5.3232 2.041 2;3 0.020489 3935 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.672 51.404 48109000 0 48109000 0 0 0 0 0 0 0 0 0 0 0 0 0 53680 1113 48198 450571;450572;450573 356103;356104 356103 0 TTEILVANDK Unmodified 1102.587 0.58700389 3967 Q96RG2 PASK PAS domain-containing serine/threonine-protein kinase yes yes 0 0 0 By MS/MS 2 0 1 1 42.521 37.373 2 0.028415 48609 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 59.597 11.748 20572000 0 20572000 0 0 0 0 0 0 0 0 0 0 0 0 0 53681 3967 48199 450574 356105 356105 1 TTEINFK Unmodified 851.43888 0.43888309 1247 P29373;P29762 CRABP2;CRABP1 Cellular retinoic acid-binding protein 2;Cellular retinoic acid-binding protein 1 yes no 0 0 0 By MS/MS 10 0 1 1 35.009 34.576 2 0.023879 38991 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 94.163 41.48 65533000 0 0 0 65533000 0 0 0 0 0 0 0 0 0 0 0 53682 1247 48200 450575 356106 356106 1 TTEINRLPSANQGSPFK Unmodified 1858.9537 0.95372509 2713 Q56NI9 ESCO2 N-acetyltransferase ESCO2 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 8.67 2.98 1 5 1 1 1 1 1 1 58.372 57.287 3 9.4225E-05 65003 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 54.953 44.672 40814000 5573100 0 0 0 0 2949700 0 0 0 7279900 10995000 10335000 0 0 3681600 53683 2713 48201 450576;450577;450578;450579;450580;450581 356107;356108;356109;356110;356111 356110 5 TTELPAADPFALAPFPSK Unmodified 1871.9669 0.96691554 3011 Q6ZSR9 Uncharacterized protein FLJ45252 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 92.234 92.341 2 3.3315E-08 107057 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.37 82.517 92824000 0 0 0 0 4979900 6445100 4871700 6471200 4090700 13427000 7802900 10613000 5226300 7778300 21118000 53684 3011 48202 450582;450583;450584;450585;450586;450587;450588;450589;450590;450591;450592 356112;356113;356114;356115;356116;356117;356118;356119;356120;356121;356122;356123;356124 356115 13 TTELVNK Unmodified 803.43888 0.43888309 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.566 12.72 2 0.019328 11527 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 110.34 54.311 116370000 0 0 0 10326000 8395600 9040000 9095500 9789100 6716800 11062000 12272000 11209000 10836000 8098600 9531800 53685 3676 48203 450593;450594;450595;450596;450597;450598;450599;450600;450601;450602;450603;450604 356125;356126;356127;356128;356129 356127 5 TTELYSPQLGTK Unmodified 1336.6874 0.68744622 637 O95263 PDE8B High affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8B yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 52.857 53.036 2 5.4483E-05 59935 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 90.149 76.012 86485000 0 0 0 0 3302500 0 3941400 4674400 6891800 8705600 20569000 0 11505000 9026500 17868000 53686 637 48204 450605;450606;450607;450608;450609;450610;450611;450612;450613;450614 356130;356131;356132;356133;356134;356135 356134 6 TTEMETIYDLGTK Oxidation (M) 1516.6967 0.69669028 5077 Q9Y230 RUVBL2 RuvB-like 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.53 3 2 11 2 2 1 1 1 1 1 1 1 1 1 1 1 1 59.883 58.216 2 1.0009E-54 73820 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 202.56 183.89 620260000 9467500 200610000 6342400 24184000 31848000 28645000 41716000 30775000 25487000 0 46835000 49455000 49846000 33945000 41096000 53687 5077 48205 450615;450616;450617;450618;450619;450620;450621;450622;450623;450624;450625;450626;450627;450628;450629;450630 356136;356137;356138;356139;356140;356141;356142;356143;356144;356145;356146;356147;356148;356149;356150;356151;356152 356138 6466 16 TTEMETIYDLGTK Unmodified 1500.7018 0.70177565 5077 Q9Y230 RUVBL2 RuvB-like 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 3 1 1 1 1 1 1 1 1 1 1 1 1 1 75.161 74.225 2;3 3.2657E-145 85702 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 223.78 193.22 3037800000 0 2396600000 11018000 24497000 31851000 35336000 28855000 46411000 27416000 55023000 75233000 70080000 45210000 52261000 138050000 53688 5077 48205 450631;450632;450633;450634;450635;450636;450637;450638;450639;450640;450641;450642;450643;450644;450645;450646 356153;356154;356155;356156;356157;356158;356159;356160;356161;356162;356163;356164;356165;356166;356167;356168;356169;356170 356162 17 TTEQDLK Unmodified 833.41306 0.41306227 2242 Q13148 TARDBP TAR DNA-binding protein 43 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 7.0376 7.1116 2 0.025177 5154 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 81.297 41.194 34698000 0 0 0 3018100 3296100 6385600 6306800 7556500 0 2456000 0 1492800 2506900 1679200 0 53689 2242 48206 450647;450648;450649;450650;450651;450652;450653;450654;450655 356171;356172 356171 2 TTESHMDWEK Oxidation (M) 1278.5187 0.51866633 1053 P17480 UBTF Nucleolar transcription factor 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 12.811 12.933 3 0.0062192 11691 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 46.406 33.45 48823000 0 0 0 6253400 5348600 5206000 4438700 0 4777200 4910900 3959300 9825100 0 4103600 0 53690 1053 48207 450656;450657;450658;450659;450660;450661;450662;450663;450664 356173;356174;356175 356174 1476 2 TTESHMDWEK Unmodified 1262.5238 0.52375171 1053 P17480 UBTF Nucleolar transcription factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 24.593 24.795 2;3 0.00090342 26295 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 105.52 90.855 344240000 0 0 0 28523000 18846000 23344000 14509000 19304000 17623000 29527000 33660000 69345000 26411000 17783000 45362000 53691 1053 48207 450665;450666;450667;450668;450669;450670;450671;450672;450673;450674;450675;450676;450677;450678;450679;450680;450681;450682;450683;450684;450685;450686;450687;450688 356176;356177;356178;356179;356180 356178 3 TTESSEESEVMAK Unmodified 1426.6134 0.61335458 2631 Q16760 DGKD Diacylglycerol kinase delta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 26.538 26.695 2 0.0070219 28429 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 46.352 40.87 20641000 0 0 0 1600400 1364500 1815500 1317200 2303300 0 2627400 2655900 0 2108100 2158200 2690000 53692 2631 48208 450689;450690;450691;450692;450693;450694;450695;450696;450697;450698 356181;356182;356183 356182 3 TTETFVK Acetyl (Protein N-term) 866.43855 0.43854874 4084 Q9BQ15 NABP2 SOSS complex subunit B1 yes yes 1 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 45.901 46.246 1 0.048802 50929 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 97.071 70.962 12976000 0 0 0 0 0 2916400 0 0 0 0 0 0 0 3716100 6343600 53693 4084 48209 450699;450700;450701 356184 356184 0 TTETQVLVASAQK Unmodified 1374.7355 0.73545904 961 P12081 HARS Histidine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 45.758 45.962 2 1.2082E-07 51137 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 128.81 94.605 50838000 0 0 0 8316700 0 0 3863300 0 0 3860100 10893000 0 3456000 7486800 12962000 53694 961 48210 450702;450703;450704;450705;450706;450707;450708;450709 356185;356186;356187;356188;356189 356188 5 TTEVIRK Unmodified 845.49707 0.49706667 2220 Q12982 BNIP2 BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 yes yes 0 0 1 By matching By MS/MS 2 0 2 1 1 9.0253 6.2802 2 0.046821 8234 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 120.9 33.316 70056000 0 38222000 31834000 0 0 0 0 0 0 0 0 0 0 0 0 53695 2220 48211 450710;450711 356190 356190 0 TTFDEAMADLHTLSEDSYK Oxidation (M) 2188.947 0.94704432 1312 P31947 SFN 14-3-3 protein sigma yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.77 3.93 6 1 6 2 3 2 1 1 1 1 1 1 78.764 76.174 3 2.6149E-31 96074 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.26 117.53 1160100000 71769000 931760000 61299000 2413700 0 0 0 4336100 0 9196400 14505000 10906000 0 0 53952000 53696 1312 48212 450712;450713;450714;450715;450716;450717;450718;450719;450720;450721;450722;450723;450724 356191;356192;356193;356194;356195;356196;356197;356198;356199;356200;356201;356202 356193 1950 12 TTFDEAMADLHTLSEDSYK Unmodified 2172.9521 0.95212969 1312 P31947 SFN 14-3-3 protein sigma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 2.64 2.09 1 10 2 1 5 7 1 1 92.809 88.704 2;3;4 1.865E-87 108702 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 175.39 161.76 2282200000 312630000 1928700000 38323000 0 0 0 0 0 0 0 0 0 0 0 2601300 53697 1312 48212 450725;450726;450727;450728;450729;450730;450731;450732;450733;450734;450735;450736;450737;450738 356203;356204;356205;356206;356207;356208;356209;356210;356211;356212;356213;356214;356215;356216;356217;356218;356219;356220;356221;356222;356223;356224 356204 21 TTFEDLIQR Unmodified 1121.5717 0.57168818 614 O94979 SEC31A Protein transport protein Sec31A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 2 73.494 73.504 2 0.0071283 84528 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 73.248 40.408 108870000 0 0 0 14033000 0 0 15978000 21786000 0 31957000 0 0 0 25114000 0 53698 614 48213 450739;450740;450741;450742;450743;450744;450745;450746;450747 356225;356226;356227;356228;356229;356230;356231;356232;356233;356234 356225 10 TTFFNVSSSTLTSK Unmodified 1518.7566 0.75658842 501 O75449 KATNA1 Katanin p60 ATPase-containing subunit A1 yes yes 0 0 0 By MS/MS 2 0 1 1 80.988 72.857 2 0.029357 95487 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.86 51.091 28540000 28540000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53699 501 48214 450748 356235 356235 1 TTFMQAIK Unmodified 938.48954 0.48953845 4630 Q9NSV4 DIAPH3 Protein diaphanous homolog 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 54.086 54.29 2 0.01982 62740 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 63.306 39.108 54810000 0 0 0 0 3507400 5289800 3473000 6242700 2448200 4923600 7847600 5704700 0 4515300 10858000 53700 4630 48215 450749;450750;450751;450752;450753;450754;450755;450756;450757;450758 356236 356236 1 TTFQENTQSISVR Unmodified 1509.7423 0.74233534 28 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 49.13 48.504 2 1.6831E-42 54527 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 177.57 169.74 218850000 0 47606000 0 10628000 8590000 15649000 9424300 10420000 9645000 18769000 16669000 21795000 10607000 16201000 22844000 53701 28 48216 450759;450760;450761;450762;450763;450764;450765;450766;450767;450768;450769;450770;450771;450772 356237;356238;356239;356240;356241;356242;356243;356244;356245;356246;356247;356248 356246 12 TTFQENTQSISVRGIK Unmodified 1807.9428 0.94282606 28 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 64.596 56.317 3 0.00033988 75679 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.197 58.677 66691000 66691000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53702 28 48217 450773 356249 356249 1 TTFTVAQNERFDADYAEK Unmodified 2104.9702 0.97016302 907;1617 P0DMM9;P0DMN0;P50225 SULT1A3;SULT1A4;SULT1A1 Sulfotransferase 1A3;Sulfotransferase 1A4;Sulfotransferase 1A1 no no 0 0 1 By MS/MS 2 0 1 1 70.44 62.155 3 0.03352 82744 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 27.7 17.741 20131000 20131000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53703 907;1617 48218 450774 356250;356251 356250 2 TTGDISVEK Unmodified 948.47639 0.47639081 2603 Q16512 PKN1 Serine/threonine-protein kinase N1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 20.123 20.269 2 0.0052791 20872 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 78.149 44.599 78692000 0 0 0 6857000 7044800 8858800 8107300 5988200 6105000 0 14099000 13532000 8100300 0 0 53704 2603 48219 450775;450776;450777;450778;450779;450780;450781;450782;450783 356252;356253;356254;356255;356256;356257;356258;356259 356252 7 TTGEENGVEAEEWGK Unmodified 1634.706 0.70600941 154 O00429 DNM1L Dynamin-1-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43.336 42.547 2 1.1896E-44 53434 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 155.48 142.52 278790000 5579800 24857000 0 9385700 12407000 24502000 13647000 17178000 12268000 27439000 38532000 19936000 17472000 18544000 37041000 53705 154 48220 450784;450785;450786;450787;450788;450789;450790;450791;450792;450793;450794;450795;450796;450797 356260;356261;356262;356263;356264;356265;356266;356267;356268;356269;356270;356271;356272;356273;356274 356263 15 TTGEGTSLRGDINVCIVGDPSTAK Unmodified 2447.1962 0.19621656 2415 Q14566 MCM6 DNA replication licensing factor MCM6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 2 1 1 76.3 71.353 3 0.0036655 91574 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.011 36.925 50774000 22899000 22209000 5665000 0 0 0 0 0 0 0 0 0 0 0 0 53706 2415 48221 450798;450799;450800;450801 356275;356276;356277 356277 2 TTGEVVSGVVSK Unmodified 1161.6241 0.62411768 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 37.2 36.659 2 1.482E-05 40510 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 133.75 109.72 486230000 0 130480000 0 21161000 23275000 32335000 24550000 30015000 20634000 30443000 27784000 44219000 38943000 30112000 32277000 53707 2361 48222 450802;450803;450804;450805;450806;450807;450808;450809;450810;450811;450812;450813;450814;450815 356278;356279;356280;356281;356282;356283;356284;356285;356286;356287;356288;356289;356290 356287 10 TTGFGMIYDSLDYAK Oxidation (M) 1696.7654 0.76543854 1916 P62847 RPS24 40S ribosomal protein S24 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 82.483 81.367 2 1.5595E-20 93982 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 116.01 93.813 1325400000 26150000 550460000 17027000 13073000 43454000 52720000 32123000 49805000 56227000 98934000 69520000 89035000 48072000 70308000 108470000 53708 1916 48223 450816;450817;450818;450819;450820;450821;450822;450823;450824;450825;450826;450827;450828;450829;450830;450831 356291;356292;356293;356294;356295;356296;356297;356298;356299;356300;356301;356302;356303;356304;356305;356306 356296 3098 16 TTGFGMIYDSLDYAK Unmodified 1680.7705 0.77052392 1916 P62847 RPS24 40S ribosomal protein S24 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.18 3.74 3 1 7 1 2 1 1 1 1 1 1 1 1 88.355 86.754 2 1.378E-39 108302 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.31 131.9 378630000 24648000 308220000 4985800 0 0 0 0 2895200 2045600 6552800 3340200 4505300 0 2636500 18798000 53709 1916 48223 450832;450833;450834;450835;450836;450837;450838;450839;450840;450841;450842 356307;356308;356309;356310;356311;356312;356313;356314;356315;356316;356317;356318;356319 356310 13 TTGFYSGFSEVAEK Unmodified 1521.6987 0.69873919 2688 Q4LE39 ARID4B AT-rich interactive domain-containing protein 4B yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 71.201 71.266 2 0.0010591 82103 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 78.903 71.522 89170000 0 0 0 4320100 4585700 6456400 8497500 5675600 0 9085200 10368000 15496000 7203500 6326600 11156000 53710 2688 48224 450843;450844;450845;450846;450847;450848;450849;450850;450851;450852;450853 356320;356321;356322;356323;356324;356325;356326;356327;356328;356329 356320 6 TTGIVETHFTFK Unmodified 1379.7085 0.70851601 872;790 P04899;P09471;P08754 GNAI2;GNAO1;GNAI3 Guanine nucleotide-binding protein G(i) subunit alpha-2;Guanine nucleotide-binding protein G(o) subunit alpha;Guanine nucleotide-binding protein G(k) subunit alpha no no 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 74.35 67.835 2;3 7.9843E-13 89584 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 128.91 113.02 151990000 141710000 0 10276000 0 0 0 0 0 0 0 0 0 0 0 0 53711 790;872 48225 450854;450855;450856 356330;356331 356331 2 TTGIVMDSGDGVTHTVPIYEGYALPHAILR Oxidation (M) 3198.6019 0.60194904 1951;1815 P60709;P63261 ACTB;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed no no 0 1 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 84.844 85.034 4 1.1682E-11 98202 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.306 38.199 112570000 0 0 0 0 0 0 0 5060900 0 0 6374900 0 0 0 101130000 53712 1815;1951 48226 450857;450858;450859 356332 356332 2946 1 TTGLEEAAEAETAK Unmodified 1419.6729 0.67291837 1979 P78362 SRPK2 SRSF protein kinase 2;SRSF protein kinase 2 N-terminal;SRSF protein kinase 2 C-terminal yes yes 0 0 0 By MS/MS 2 0 1 1 49.76 44.054 2 0.00073775 57173 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.09 92.315 27278000 0 27278000 0 0 0 0 0 0 0 0 0 0 0 0 0 53713 1979 48227 450860 356333;356334 356333 2 TTGNATVDHLSK Unmodified 1242.6204 0.62042929 2130 Q06587 RING1 E3 ubiquitin-protein ligase RING1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching 9.5 1.8 1 13 1 1 1 1 2 2 1 2 1 1 1 17.665 17.424 2;3 0.00013574 16699 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 93.096 73.309 166530000 0 6003100 0 0 0 0 22596000 18613000 10876000 0 22456000 0 27383000 25294000 33310000 53714 2130 48228 450861;450862;450863;450864;450865;450866;450867;450868;450869;450870;450871;450872;450873;450874 356335;356336;356337;356338;356339;356340;356341;356342;356343;356344 356340 8 TTGQVVAMK Oxidation (M) 949.49027 0.49026674 822 P06493 CDK1 Cyclin-dependent kinase 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 10.158 9.7456 2 0.0022349 8593 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 105.14 68.375 392980000 0 234950000 0 11277000 8289600 15882000 16051000 8355100 9378200 18269000 21268000 0 14088000 13255000 21917000 53715 822 48229 450875;450876;450877;450878;450879;450880;450881;450882;450883;450884;450885;450886;450887;450888 356345;356346;356347;356348;356349;356350;356351;356352;356353;356354;356355;356356;356357;356358 356346 988 14 TTGQVVAMK Unmodified 933.49535 0.49535211 822 P06493 CDK1 Cyclin-dependent kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 23.748 23.318 2 0.0055016 29730 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.01 82.05 1275700000 0 730550000 0 27469000 26001000 41063000 33124000 30377000 22709000 47525000 56855000 64813000 45166000 52890000 97164000 53716 822 48229 450889;450890;450891;450892;450893;450894;450895;450896;450897;450898;450899;450900;450901;450902 356359;356360;356361;356362;356363;356364;356365;356366;356367;356368;356369 356361 3 TTGTPPDSSLVTYELHSRPEQDK Unmodified 2557.2296 0.22962518 2317 Q13561 DCTN2 Dynactin subunit 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.1 3.41 5 16 2 1 2 1 1 2 1 2 1 1 1 2 1 1 2 64.357 63.051 3;4 1.4066E-42 82759 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.64 114.57 844410000 69935000 175720000 246260000 8834300 11183000 32692000 13770000 20971000 16445000 28262000 31779000 48931000 30491000 26904000 82229000 53717 2317 48230 450903;450904;450905;450906;450907;450908;450909;450910;450911;450912;450913;450914;450915;450916;450917;450918;450919;450920;450921;450922;450923 356370;356371;356372;356373;356374;356375;356376;356377;356378;356379;356380;356381;356382;356383;356384 356373 13 TTGYSDRPTAR Unmodified 1223.5895 0.58946351 4534 Q9NP61 ARFGAP3 ADP-ribosylation factor GTPase-activating protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 10.52 10.661 3 0.00094966 9224 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 60.255 43.229 375380000 0 0 0 25800000 19647000 28284000 28237000 26131000 19242000 35421000 39984000 43782000 41500000 29434000 37915000 53718 4534 48231 450924;450925;450926;450927;450928;450929;450930;450931;450932;450933;450934;450935 356385;356386;356387;356388;356389;356390;356391;356392;356393;356394;356395 356390 8 TTHFVEGGDAGNREDQINR Unmodified 2114.973 0.97295699 1072 P18124 RPL7 60S ribosomal protein L7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 25 2 3 2 2 2 2 2 2 2 2 2 2 29.729 29.897 3;4 1.9977E-53 31130 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 148.56 88.083 1855100000 0 0 0 74688000 64058000 86442000 93224000 86550000 95060000 132840000 130350000 217190000 327150000 267660000 279900000 53719 1072 48232 450936;450937;450938;450939;450940;450941;450942;450943;450944;450945;450946;450947;450948;450949;450950;450951;450952;450953;450954;450955;450956;450957;450958;450959;450960 356396;356397;356398;356399;356400;356401;356402;356403;356404;356405;356406;356407;356408;356409;356410;356411;356412;356413;356414;356415;356416;356417 356401 14 TTHLIAK Unmodified 782.46504 0.46503826 130 O00232 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 4 1 1 2 14.364 11.354 2 0.016259 16712 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 128.48 85.361 2284900000 1549600000 253670000 481560000 0 0 0 0 0 0 0 0 0 0 0 0 53720 130 48233 450961;450962;450963;450964 356418;356419;356420 356419 2 TTIENIQLPHTLLSR Unmodified 1734.9628 0.96283322 1332 P33991 MCM4 DNA replication licensing factor MCM4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 81.044 81.181 3 0.00079565 93852 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 57.788 39.649 144330000 0 0 0 0 0 12408000 0 7611800 9732300 12946000 13014000 11017000 5064500 8908600 63630000 53721 1332 48234 450965;450966;450967;450968;450969;450970;450971;450972;450973 356421;356422;356423;356424;356425;356426;356427;356428;356429 356422 9 TTIFSPEGR Unmodified 1006.5084 0.50835964 1196 P25789 PSMA4 Proteasome subunit alpha type-4 yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 44.447 44.637 2 0.0035134 50935 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 107.66 72.857 431740000 0 0 0 36329000 11994000 0 22740000 24628000 0 0 62075000 68971000 20287000 48838000 135880000 53722 1196 48235 450974;450975;450976;450977;450978;450979;450980;450981;450982 356430;356431;356432;356433;356434 356434 4 TTIFTDAK Unmodified 895.4651 0.46509784 2523 Q15370 TCEB2 Transcription elongation factor B polypeptide 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 36.817 35.864 2 0.0087284 38483 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 85.212 68.285 4121000000 68998000 3413300000 0 29627000 30689000 45666000 39398000 30305000 24789000 41130000 80713000 67639000 42320000 70674000 135740000 53723 2523 48236 450983;450984;450985;450986;450987;450988;450989;450990;450991;450992;450993;450994;450995;450996;450997 356435;356436;356437;356438;356439;356440;356441;356442;356443;356444 356442 8 TTIHQLTMQK Oxidation (M) 1215.6282 0.6281572 1029 P15924 DSP Desmoplakin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.18 3.35 5 17 1 2 2 2 2 1 2 2 1 1 2 2 1 1 23.646 22.957 2;3 0.0013358 22940 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 86.898 47.252 335930000 26086000 20389000 18931000 56619000 17402000 8072500 19798000 49731000 3934400 13550000 0 48893000 25725000 13157000 13644000 53724 1029 48237 450998;450999;451000;451001;451002;451003;451004;451005;451006;451007;451008;451009;451010;451011;451012;451013;451014;451015;451016;451017;451018;451019 356445;356446;356447;356448;356449;356450;356451;356452 356451 1450 4 TTIHQLTMQK Unmodified 1199.6332 0.63324258 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.87 3 5 1 1 1 1 1 1 1 1 35.536 33.667 2;3 0.012418 35222 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 70.552 36.548 166450000 48164000 7844600 5923700 0 0 0 0 47699000 0 0 18501000 26217000 0 0 12098000 53725 1029 48237 451020;451021;451022;451023;451024;451025;451026;451027 356453;356454;356455;356456;356457 356457 4 TTIIECLK Unmodified 976.52632 0.52631789 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 61.056 56.217 2 0.028816 72288 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.282 47.097 34987000 0 33442000 1544400 0 0 0 0 0 0 0 0 0 0 0 0 53726 3676 48238 451028;451029 356458 356458 1 TTIIWDAHTGEAK Unmodified 1441.7201 0.72014333 4270;443;4091 Q9BZK7;O60907;Q9BQ87 TBL1XR1;TBL1X;TBL1Y F-box-like/WD repeat-containing protein TBL1XR1;F-box-like/WD repeat-containing protein TBL1X;F-box-like/WD repeat-containing protein TBL1Y no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 2 16 2 1 1 1 1 1 2 2 2 1 2 2 50.981 50.67 2;3 7.3729E-12 57299 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 110.38 96.296 534120000 0 0 75467000 19480000 23603000 0 0 36147000 0 47924000 60931000 52936000 34699000 64754000 118170000 53727 4270;443;4091 48239 451030;451031;451032;451033;451034;451035;451036;451037;451038;451039;451040;451041;451042;451043;451044;451045;451046;451047 356459;356460;356461;356462;356463;356464;356465;356466;356467;356468;356469;356470;356471;356472;356473;356474;356475;356476;356477;356478;356479;356480;356481;356482;356483;356484;356485;356486;356487;356488;356489;356490 356472 31 TTILQSTGK Unmodified 947.52876 0.52876073 2916 Q6P1J9 CDC73 Parafibromin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 2 1 1 1 1 1 1 25.507 25.751 2 0.0038222 27917 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 88.819 52.118 317740000 0 0 0 18418000 0 26985000 0 19899000 0 45865000 51165000 0 54263000 45513000 55638000 53728 2916 48240 451048;451049;451050;451051;451052;451053;451054;451055;451056;451057;451058;451059;451060 356491;356492;356493;356494;356495;356496;356497;356498;356499;356500;356501;356502;356503;356504;356505;356506 356491 16 TTIPEEEEEEEEAAGVVVEEELFHQQGTPR Unmodified 3410.5638 0.56376843 1111 P20700 LMNB1 Lamin-B1 yes yes 0 0 0 By MS/MS 2 0 1 1 96.765 88.634 3 0.001405 114550 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 30.471 22.706 15036000 15036000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53729 1111 48241 451061 356507 356507 1 TTISVAHLLAAR Unmodified 1251.7299 0.72992016 3407 Q8NCA5 FAM98A Protein FAM98A yes yes 0 0 0 By matching By MS/MS By matching By matching By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 73.704 73.809 3 0.023256 85086 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 35.645 24.113 31374000 0 0 0 0 2194700 6852500 2420300 0 0 0 3204300 5740500 2213800 0 8747400 53730 3407 48242 451062;451063;451064;451065;451066;451067;451068 356508 356508 1 TTITEPHHIWPTLTDEEWIK Unmodified 2446.2169 0.21687565 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 0 By MS/MS 3 0 1 1 87.826 84.615 4 0.0010034 101244 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 44.816 31.496 5003000 0 5003000 0 0 0 0 0 0 0 0 0 0 0 0 0 53731 2930 48243 451069 356509 356509 1 TTITPEQLEILYQK Unmodified 1675.9033 0.90325265 2594 Q15911 ZFHX3 Zinc finger homeobox protein 3 yes yes 0 0 0 By MS/MS 10 0 1 1 84.058 84.159 2 0.016154 97483 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 62.799 62.799 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53732 2594 48244 451070 356510 356510 1 TTIYEIQDDRGK Unmodified 1437.71 0.70997257 2627 Q16666 IFI16 Gamma-interferon-inducible protein 16 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39.28 38.804 3 0.00056085 43108 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 73.848 63.522 237830000 0 19223000 5020100 9171600 6957600 16555000 13172000 10175000 9404500 22190000 27727000 24441000 14494000 17492000 41806000 53733 2627 48245 451071;451072;451073;451074;451075;451076;451077;451078;451079;451080;451081;451082;451083;451084 356511;356512;356513;356514;356515;356516;356517;356518;356519;356520;356521;356522;356523;356524 356515 13 TTLAHIIASNSK Unmodified 1254.6932 0.6932003 3983 Q96S55 WRNIP1 ATPase WRNIP1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS 9.56 1.83 1 17 1 1 1 2 1 2 2 2 2 1 1 1 1 46.869 46.58 2;3 2.5484E-06 50833 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 112.95 95.706 302960000 52618000 0 0 3558000 5905500 34030000 9910200 30501000 20515000 38726000 47885000 11581000 19906000 9620300 18204000 53734 3983 48246 451085;451086;451087;451088;451089;451090;451091;451092;451093;451094;451095;451096;451097;451098;451099;451100;451101;451102 356525;356526;356527;356528;356529;356530;356531;356532;356533;356534 356530 8 TTLAHVIAR Unmodified 980.57671 0.57671398 3559 Q8WVB6 CHTF18 Chromosome transmission fidelity protein 18 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 34.625 34.822 2 0.027398 37287 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 49.423 24.604 113280000 0 0 0 4449800 4704700 0 7521000 8864800 7257100 9487300 13886000 13514000 16103000 11672000 15826000 53735 3559 48247 451103;451104;451105;451106;451107;451108;451109;451110;451111;451112;451113 356535;356536 356535 1 TTLASAVACLEGK Unmodified 1319.6755 0.67550132 3104 Q7Z569 BRAP BRCA1-associated protein yes yes 0 0 0 By MS/MS 2 0 1 1 81.485 78.995 2 0.015094 95827 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 59.84 31.441 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53736 3104 48248 451114 356537 356537 1 TTLEGHLAK Unmodified 968.5291 0.52909508 4199 Q9BW19 KIFC1 Kinesin-like protein KIFC1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.107 20.308 2 0.011616 20415 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 62.546 18.429 155330000 0 0 0 10349000 9955800 11629000 11289000 8295500 13430000 14305000 19595000 16837000 12380000 8670500 18597000 53737 4199 48249 451115;451116;451117;451118;451119;451120;451121;451122;451123;451124;451125;451126 356538;356539;356540;356541;356542;356543;356544;356545;356546;356547;356548;356549 356543 12 TTLEIHNTEER Unmodified 1341.6525 0.6524577 1479 P43378 PTPN9 Tyrosine-protein phosphatase non-receptor type 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 1 2 1 2 2 2 2 2 2 2 1 26.227 26.44 2;3 0.0019359 28120 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 70.028 55.362 120730000 0 0 0 7896300 5984300 13890000 6623700 6971600 5596400 11774000 14234000 18821000 11353000 8578400 9002700 53738 1479 48250 451127;451128;451129;451130;451131;451132;451133;451134;451135;451136;451137;451138;451139;451140;451141;451142;451143;451144;451145;451146;451147 356550;356551;356552;356553;356554;356555;356556;356557;356558;356559;356560 356557 9 TTLEIHNTEERQK Unmodified 1597.806 0.80599822 1479 P43378 PTPN9 Tyrosine-protein phosphatase non-receptor type 9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 19.899 19.811 3 0.0024733 20585 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 52.576 40.599 41634000 0 0 11632000 0 2449700 2412500 3244300 0 2939800 4429400 4193100 3891900 0 3084900 3357200 53739 1479 48251 451148;451149;451150;451151;451152;451153;451154;451155;451156;451157 356561;356562;356563;356564;356565;356566;356567;356568 356563 8 TTLFTQAAHGGQASLMK Unmodified 1760.888 0.88795372 5000 Q9ULM3 YEATS2 YEATS domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 65.634 63.11 3 0.00054171 86282 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.729 41.137 19641000 7913400 0 0 0 0 0 0 0 0 3678300 0 8049800 0 0 0 53740 5000 48252 451158;451159;451160 356569;356570;356571 356570 3 TTLILPTQQVR Unmodified 1268.7452 0.74523587 5073 Q9UQR0 SCML2 Sex comb on midleg-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.15 68.23 2 0.0012585 78027 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.985 63.275 53607000 0 0 0 2476200 3209600 3589300 3734500 2971100 2949200 5893500 6323300 9226100 4060400 4325800 4847700 53741 5073 48253 451161;451162;451163;451164;451165;451166;451167;451168;451169;451170;451171;451172 356572;356573;356574;356575;356576;356577;356578;356579;356580;356581;356582;356583 356581 12 TTLLEGFAGVEEAR Unmodified 1491.7569 0.75692277 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 82.016 82.111 2 0.00034971 95385 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 96.229 75.359 38470000 0 0 0 0 2268900 3055600 2025300 0 2651900 5336200 5078700 3802800 2131800 3474100 8644900 53742 1364 48254 451173;451174;451175;451176;451177;451178;451179;451180;451181;451182 356584;356585;356586;356587;356588;356589;356590;356591 356590 8 TTLLEGFAGVEEAREQNER Unmodified 2148.0447 0.044724946 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 77.705 77.851 3 1.8043E-17 89503 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.814 85.674 93118000 0 0 0 0 0 10409000 0 10312000 9128600 9527300 7083600 12087000 4812600 6643200 23115000 53743 1364 48255 451183;451184;451185;451186;451187;451188;451189;451190;451191 356592;356593;356594;356595;356596;356597;356598;356599;356600;356601 356594 10 TTLLELQK Unmodified 944.55425 0.5542472 3024 Q70CQ2 USP34 Ubiquitin carboxyl-terminal hydrolase 34 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 60.849 56.02 2 0.028816 71869 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.282 19.819 47100000 0 45488000 1612900 0 0 0 0 0 0 0 0 0 0 0 0 53744 3024 48256 451192;451193 356602 356602 1 TTLLHMLK Unmodified 955.55247 0.55247306 4589;5274 Q9NR31;Q9Y6B6 SAR1A;SAR1B GTP-binding protein SAR1a;GTP-binding protein SAR1b no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 58.951 58.591 2 0.002564 82860 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.49 91.976 272240000 0 16867000 0 0 0 28477000 13155000 17299000 17446000 17127000 0 27029000 24196000 27000000 83642000 53745 4589;5274 48257 451194;451195;451196;451197;451198;451199;451200;451201;451202;451203;451204 356603;356604;356605;356606;356607;356608;356609;356610;356611;356612;356613;356614;356615;356616;356617 356608 14 TTLLHMLK Oxidation (M) 971.54739 0.54738768 4589;5274 Q9NR31;Q9Y6B6 SAR1A;SAR1B GTP-binding protein SAR1a;GTP-binding protein SAR1b no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 39.262 38.03 2 0.0064429 40885 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 81.784 58.765 375760000 73106000 0 13959000 30494000 26544000 0 55898000 0 35872000 0 50206000 0 53943000 35737000 0 53746 4589;5274 48257 451205;451206;451207;451208;451209;451210;451211;451212;451213;451214;451215 356618;356619;356620;356621;356622;356623;356624;356625;356626;356627;356628;356629;356630 356623 5988 13 TTLLPGLLK Unmodified 954.61137 0.61136815 4625 Q9NSD9 FARSB Phenylalanine--tRNA ligase beta subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.014 81.074 2 0.0031591 93805 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 92.47 74.622 119890000 0 0 0 5422900 4233900 10884000 7455000 6740500 6149500 8758400 11295000 11764000 6665600 10077000 30446000 53747 4625 48258 451216;451217;451218;451219;451220;451221;451222;451223;451224;451225;451226;451227 356631;356632;356633;356634;356635;356636;356637;356638;356639;356640;356641;356642 356631 12 TTLLPSGAEVLSYSEAAK Unmodified 1835.9517 0.95165941 2851 Q687X5 STEAP4 Metalloreductase STEAP4 yes yes 0 0 0 By MS/MS 2 0 1 1 87.733 82.891 2 0.0005568 102986 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.513 53.783 44356000 0 44356000 0 0 0 0 0 0 0 0 0 0 0 0 0 53748 2851 48259 451228 356643 356643 1 TTLPERPLTEVK Unmodified 1382.7769 0.77692993 3955 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.177 48.339 3 0.002726 55045 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 73.435 58.233 903880000 0 0 0 59378000 41854000 50516000 61327000 54690000 68699000 86137000 83140000 111040000 94973000 82351000 109780000 53749 3955 48260 451229;451230;451231;451232;451233;451234;451235;451236;451237;451238;451239;451240 356644;356645;356646;356647;356648;356649;356650;356651;356652;356653;356654;356655 356655 7 TTLPTFQSPEFSVTR Unmodified 1709.8625 0.86245047 5254 Q9Y5X3 SNX5 Sorting nexin-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.818 81.88 2 0.00011741 94734 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 83.047 74.093 262430000 0 0 0 5107200 10561000 20305000 11745000 14181000 13103000 28761000 25142000 32125000 16499000 23456000 61443000 53750 5254 48261 451241;451242;451243;451244;451245;451246;451247;451248;451249;451250;451251;451252 356656;356657;356658;356659;356660;356661;356662;356663;356664;356665;356666;356667;356668 356661 13 TTLSASGTGFGDK Unmodified 1240.5935 0.59354583 1600 P49790 NUP153 Nuclear pore complex protein Nup153 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 39.832 39.277 2 2.7698E-13 43277 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 162.36 140.86 693380000 0 234020000 0 22748000 32744000 30826000 34147000 35926000 28049000 44464000 41761000 55079000 37814000 34413000 61393000 53751 1600 48262 451253;451254;451255;451256;451257;451258;451259;451260;451261;451262;451263;451264;451265;451266 356669;356670;356671;356672;356673;356674;356675;356676;356677;356678;356679;356680;356681;356682 356680 14 TTLTAAITK Unmodified 918.5386 0.53859714 1572 P49411 TUFM Elongation factor Tu, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 42.611 41.381 2 0.0089039 52953 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.819 51.288 887540000 97611000 609260000 13487000 11312000 8089500 10241000 9888400 9225100 6010500 13639000 17192000 21434000 13784000 16808000 29566000 53752 1572 48263 451267;451268;451269;451270;451271;451272;451273;451274;451275;451276;451277;451278;451279;451280;451281;451282 356683;356684;356685;356686;356687;356688;356689;356690;356691;356692 356685 7 TTLVGIIK Unmodified 843.54295 0.54295423 2183 Q12768 KIAA0196 WASH complex subunit strumpellin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 65.158 64.543 2 0.02509 73929 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 58.981 33.983 156190000 109340000 0 0 2887200 2564800 4819300 3115700 3853200 2786200 4949200 0 4271900 4331000 4888500 8387200 53753 2183 48264 451283;451284;451285;451286;451287;451288;451289;451290;451291;451292;451293;451294 356693;356694;356695;356696;356697;356698 356697 6 TTLVIMER Unmodified 961.52665 0.52665224 2457 Q14974 KPNB1 Importin subunit beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 56.684 56.812 2 0.006867 64567 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 93.195 70.124 120610000 0 0 0 0 0 35840000 15906000 16529000 10710000 41627000 0 0 0 0 0 53754 2457 48265 451295;451296;451297;451298;451299 356699;356700;356701 356699 3 TTLVIMER Oxidation (M) 977.52157 0.52156686 2457 Q14974 KPNB1 Importin subunit beta-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 40.93 41.201 2 0.041266 44479 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.548 56.549 72412000 0 0 0 0 0 24158000 0 13363000 9099200 0 0 0 0 0 25792000 53755 2457 48265 451300;451301;451302;451303 356702 356702 0 TTLVLDNGAYNAK Acetyl (Protein N-term) 1420.7198 0.71980898 4295 Q9GZN1 ACTR6 Actin-related protein 6 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.576 76.638 2 6.3203E-12 88511 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 119.68 104.82 64673000 0 0 0 3887100 3884200 0 5044600 5099300 4688500 7951100 7971800 9428800 0 5170900 11547000 53756 4295 48266 451304;451305;451306;451307;451308;451309;451310;451311;451312;451313;451314 356703;356704;356705;356706;356707;356708;356709;356710;356711;356712;356713 356703 11 TTMRDVYK Unmodified 1012.5012 0.50116577 1620 P50395 GDI2 Rab GDP dissociation inhibitor beta yes yes 0 0 1 By matching By MS/MS By MS/MS 2 0 3 1 1 1 23.567 19.543 2 0.038154 26394 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.81 66.145 2308400000 2015100000 216260000 77055000 0 0 0 0 0 0 0 0 0 0 0 0 53757 1620 48267 451315;451316;451317 356714;356715 356714 0 TTNAGPLHPYWPQHLR Acetyl (Protein N-term) 1928.9646 0.96456455 2499 Q15125 EBP 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase yes yes 1 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 75.83 76.006 3 0.0063112 87273 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.592 33.311 40329000 0 0 0 0 0 9585600 0 0 3560200 0 0 6771900 0 0 20412000 53758 2499 48268 451318;451319;451320;451321 356716 356716 0 TTNAQEAEAAIR Unmodified 1273.6262 0.62624295 246 O15056 SYNJ2 Synaptojanin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 34.144 34.168 2 0.0010824 37467 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 70.808 39.314 7116000 0 0 0 0 0 3920300 3195800 0 0 0 0 0 0 0 0 53759 246 48269 451322;451323;451324;451325;451326 356717;356718;356719;356720;356721 356718 5 TTNEVVLAVEFHPTDANTIITCGK Unmodified 2629.3058 0.30576701 4505 Q9HC35 EML4 Echinoderm microtubule-associated protein-like 4 yes yes 0 0 0 By MS/MS 2 0 1 1 90.425 82.294 3 0.0001109 106925 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.983 48.271 13641000 13641000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53760 4505 48270 451327 356722 356722 1 TTNFAGILSQGLR Unmodified 1376.7412 0.74121312 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 84.212 84.277 2 1.8574E-19 97718 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 152.07 132.72 371040000 0 0 0 7202700 12713000 28247000 22650000 35400000 21695000 35147000 37957000 41018000 18144000 26851000 84014000 53761 894 48271 451328;451329;451330;451331;451332;451333;451334;451335;451336;451337;451338;451339 356723;356724;356725;356726;356727;356728;356729;356730;356731;356732;356733;356734 356732 12 TTNFEGFLAK Unmodified 1126.5659 0.56587452 2805 Q5VIR6 VPS53 Vacuolar protein sorting-associated protein 53 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.961 72.03 2 0.0080794 82779 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 60.91 46.135 42301000 0 0 0 2250100 2841500 3597500 3964000 3870400 1733000 4272800 3051800 3959700 4196200 2940200 5623400 53762 2805 48272 451340;451341;451342;451343;451344;451345;451346;451347;451348;451349;451350;451351 356735;356736;356737;356738;356739;356740;356741;356742;356743 356739 9 TTNIELQGVPNDEVHPLLGVK Unmodified 2272.2063 0.20631097 2514 Q15291 RBBP5 Retinoblastoma-binding protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 81.06 79.761 3 6.5569E-48 100072 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.69 109.44 445250000 10592000 208780000 40692000 2541400 9262000 13658000 7574900 15187000 16266000 25763000 0 32177000 10554000 0 52200000 53763 2514 48273 451352;451353;451354;451355;451356;451357;451358;451359;451360;451361;451362;451363;451364;451365 356744;356745;356746;356747;356748;356749;356750;356751;356752;356753;356754;356755 356746 11 TTNLPTSVTATK Unmodified 1232.6612 0.66123147 2748 Q5MIZ7 SMEK2 Serine/threonine-protein phosphatase 4 regulatory subunit 3B yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 40.943 40.612 2 0.0026095 50967 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.397 43.548 75620000 0 34155000 0 0 0 4108000 0 0 2823400 3775700 6567900 6999700 0 8325200 8864400 53764 2748 48274 451366;451367;451368;451369;451370;451371;451372;451373 356756;356757;356758 356756 3 TTNPDVHPTEATPSSTFTGIRPAR Unmodified 2552.2619 0.26192836 3340 Q8N573 OXR1 Oxidation resistance protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.08 56.205 4 0.00012671 63241 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 37.458 29.369 116200000 0 0 0 7303500 3598900 10283000 5372400 7145100 4366200 9847400 11075000 12314000 11939000 10455000 22498000 53765 3340 48275 451374;451375;451376;451377;451378;451379;451380;451381;451382;451383;451384;451385 356759;356760;356761;356762 356761 4 TTNSSHANGAAQAPR Unmodified 1481.6971 0.69711648 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.3025 6.4232 3 1.5308E-50 4600 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 150.21 137.86 123900000 0 0 0 8021600 6979800 7667100 13880000 6216500 8193600 8558400 14226000 16626000 7781300 11529000 14223000 53766 619 48276 451386;451387;451388;451389;451390;451391;451392;451393;451394;451395;451396;451397 356763;356764;356765;356766;356767;356768;356769;356770;356771;356772;356773;356774;356775 356769 13 TTNSSLEEIMDK Oxidation (M) 1382.6235 0.62352533 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 1 2 2 2 2 2 2 2 2 1 38.416 38.571 2 1.6389E-05 42311 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 93.058 72.188 147310000 0 0 0 8417100 10571000 4880100 11895000 10300000 14859000 15582000 18929000 25643000 16597000 5400400 4234900 53767 3023 48277 451398;451399;451400;451401;451402;451403;451404;451405;451406;451407;451408;451409;451410;451411;451412;451413;451414;451415;451416;451417;451418;451419 356776;356777;356778;356779;356780;356781;356782;356783;356784;356785;356786;356787;356788;356789;356790;356791;356792;356793;356794;356795;356796 356786 4638 21 TTNSSLEEIMDK Unmodified 1366.6286 0.62861071 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 61.768 61.733 2 0.00039657 70507 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 80.706 57.993 159030000 0 0 0 17751000 20401000 0 0 28373000 12694000 0 0 45875000 33931000 0 0 53768 3023 48277 451420;451421;451422;451423;451424;451425 356797 356797 1 TTNSSWVVVFK Unmodified 1266.6608 0.66083754 2300 Q13492 PICALM Phosphatidylinositol-binding clathrin assembly protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.617 79.72 2 0.00042721 92184 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 85.676 58.422 71601000 0 0 0 0 2028400 3932400 3583700 6558100 3394000 7213900 8211800 6179700 6069800 5072800 19357000 53769 2300 48278 451426;451427;451428;451429;451430;451431;451432;451433;451434;451435;451436 356798;356799;356800;356801;356802;356803;356804;356805;356806;356807 356798 10 TTNTVEPLRGNLVK Unmodified 1540.8573 0.85730551 2394 Q14210 LY6D Lymphocyte antigen 6D yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 48.366 48.539 3 0.00028307 55492 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 57.804 46.525 162740000 0 0 0 72086000 13037000 0 8793900 23779000 0 0 12318000 8553100 10955000 4763300 8452300 53770 2394 48279 451437;451438;451439;451440;451441;451442;451443;451444;451445 356808;356809;356810;356811;356812;356813;356814 356813 7 TTNVLGAVNK Unmodified 1015.5662 0.56620887 4633 Q9NTI5 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes yes 0 0 0 By MS/MS 2 0 1 1 43.234 38.086 2 0.00010524 49304 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.09 88.251 86933000 0 86933000 0 0 0 0 0 0 0 0 0 0 0 0 0 53771 4633 48280 451446 356815;356816 356815 2 TTNWQALLAR Unmodified 1172.6302 0.63020611 2938 Q6P5Z2 PKN3 Serine/threonine-protein kinase N3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 78.587 78.69 2 0.0026644 90719 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 94.302 59.495 58483000 0 0 0 0 4301100 6571600 5443500 5869700 6525100 3451000 6350800 6437300 5363100 0 8170100 53772 2938 48281 451447;451448;451449;451450;451451;451452;451453;451454;451455;451456 356817;356818;356819;356820;356821;356822 356819 6 TTNYSTVPQK Unmodified 1137.5666 0.5666028 2960 Q6PJT7 ZC3H14 Zinc finger CCCH domain-containing protein 14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 20.2 20.428 2 0.041369 21105 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 47.603 30.827 79340000 0 0 0 5522300 3335900 0 4163600 2723300 4343600 0 11343000 11865000 17272000 9510900 9260000 53773 2960 48282 451457;451458;451459;451460;451461;451462;451463;451464;451465;451466 356823;356824 356824 2 TTPANAQNASK Acetyl (Protein N-term) 1143.552 0.55201537 2130 Q06587 RING1 E3 ubiquitin-protein ligase RING1 yes yes 1 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.828 14.999 2 0.0002072 13852 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.556 62.675 107590000 0 0 0 6826500 4784500 7847000 7057000 6537300 6195600 7843800 12158000 10930000 10614000 10993000 15808000 53774 2130 48283 451467;451468;451469;451470;451471;451472;451473;451474;451475;451476;451477;451478 356825;356826;356827;356828;356829;356830;356831;356832 356827 8 TTPANPVGPSGGMSDDDK Unmodified 1744.7574 0.75739305 2443 Q14746 COG2 Conserved oligomeric Golgi complex subunit 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.459 36.641 2 2.2035E-05 40175 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 70.412 66.649 36490000 0 0 0 2070400 1493200 3264800 1895900 2515600 2088400 3135700 3057900 6560100 2947800 2012400 5447900 53775 2443 48284 451479;451480;451481;451482;451483;451484;451485;451486;451487;451488;451489;451490 356833;356834;356835 356835 3 TTPAPVNQTDREK Unmodified 1455.7318 0.73177065 3432 Q8NEY1 NAV1 Neuron navigator 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 13.748 13.905 3 1.3526E-09 13308 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 102.73 85.789 170130000 0 0 0 10434000 15028000 13260000 13670000 13369000 13523000 0 18906000 30361000 0 15873000 25709000 53776 3432 48285 451491;451492;451493;451494;451495;451496;451497;451498;451499;451500;451501 356836;356837;356838;356839;356840;356841;356842;356843;356844 356843 9 TTPASGERGIASTSDPPTANIK Unmodified 2170.0866 0.086589761 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 1 By matching By MS/MS 2 0 2 1 1 48.572 43.779 3 0.0036744 55167 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 36.679 28.458 32653000 0 27599000 5054000 0 0 0 0 0 0 0 0 0 0 0 0 53777 965 48286 451502;451503 356845;356846 356846 2 TTPASGERGIASTSDPPTANIKPTPVVSTPSK Unmodified 3163.6361 0.63608594 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 65.318 59.291 4 4.0689E-06 79099 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.733 36.703 150710000 102510000 0 48199000 0 0 0 0 0 0 0 0 0 0 0 0 53778 965 48287 451504;451505 356847;356848 356847 2 TTPELEIVLQK Unmodified 1269.718 0.71801807 624 O95163 IKBKAP Elongator complex protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.24 2 1 10 1 2 1 1 1 1 1 1 1 1 1 1 78.705 77.539 2 0.002922 93100 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 83.948 54.138 399850000 13034000 275660000 0 0 5736100 11733000 7243500 7249800 7278100 11987000 14564000 0 10507000 12245000 22620000 53779 624 48288 451506;451507;451508;451509;451510;451511;451512;451513;451514;451515;451516;451517;451518 356849;356850;356851;356852;356853;356854 356851 6 TTPEYVFHCQSAVMSATFAK Oxidation (M) 2290.0398 0.039839264 2281 Q13409 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 yes yes 0 1 0 By MS/MS 2 0 1 1 76.738 68.607 3 7.311E-07 90377 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.866 56.665 59336000 59336000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53780 2281 48289 451519 356855 356855 3713 1 TTPEYVFHCQSAVMSATFAK Unmodified 2274.0449 0.044924642 2281 Q13409 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 yes yes 0 0 0 By MS/MS 2 0 1 1 84.081 75.95 3 0.00092577 99159 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.463 28.042 86184000 86184000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53781 2281 48289 451520 356856 356856 1 TTPGTLAR Unmodified 815.45012 0.45011648 4818 Q9P2I0 CPSF2 Cleavage and polyadenylation specificity factor subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 15.996 16.157 2 0.013011 15605 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.324 25.209 50386000 0 0 0 3158800 1802400 2824500 0 3742100 2458500 3860400 0 7719200 6787800 8636400 9395500 53782 4818 48290 451521;451522;451523;451524;451525;451526;451527;451528;451529;451530;451531 356857;356858;356859;356860;356861 356861 5 TTPLGGLGPGEAR Unmodified 1224.6463 0.64625011 4518 Q9HCM7 FBRSL1 Fibrosin-1-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.825 51.973 2 0.0024326 58460 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 58.676 47.919 106070000 0 0 0 5473900 7031700 6818600 6251800 7972700 6362200 9700800 10560000 15492000 12473000 8260200 9675000 53783 4518 48291 451532;451533;451534;451535;451536;451537;451538;451539;451540;451541;451542;451543 356862;356863;356864;356865;356866;356867;356868;356869;356870 356865 9 TTPLKPSPLPVIPDTIK Unmodified 1816.071 0.070986684 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.66 2.95 4 1 24 2 2 1 2 2 2 2 2 2 2 2 2 2 2 2 81.201 80.326 2;3 8.8852E-07 101709 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.519 70.615 1890700000 562370000 595960000 41943000 18724000 24786000 60552000 32113000 41632000 33419000 70529000 77499000 89580000 44144000 67565000 129910000 53784 3119 48292 451544;451545;451546;451547;451548;451549;451550;451551;451552;451553;451554;451555;451556;451557;451558;451559;451560;451561;451562;451563;451564;451565;451566;451567;451568;451569;451570;451571;451572 356871;356872;356873;356874;356875;356876;356877;356878;356879;356880;356881;356882;356883;356884;356885;356886;356887;356888;356889 356874 18 TTPLLSFLK Unmodified 1018.6063 0.60628277 4267 Q9BZI7 UPF3B Regulator of nonsense transcripts 3B yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 95.072 88.574 2 0.040654 112419 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.436 36.464 13727000 7904900 5822000 0 0 0 0 0 0 0 0 0 0 0 0 0 53785 4267 48293 451573;451574 356890;356891 356891 2 TTPMAYSEEK Oxidation (M) 1171.5067 0.50670466 5373 yes yes 0 1 0 By MS/MS 10 0 2 2 11.841 12.225 2 0.019606 10486 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.246 16.644 + 2930300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2930300 53786 5373 48294 451575;451576 356892;356893 356892 6752 2 TTPNSGDVQVTEDAVR Unmodified 1687.8013 0.80130678 1351 P35269 GTF2F1 General transcription factor IIF subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 44.703 45.193 2 3.7513E-10 49578 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.858 79.644 35157000 0 0 0 0 0 0 0 0 0 5355700 6522500 6607300 5620700 0 11051000 53787 1351 48295 451577;451578;451579;451580;451581;451582;451583;451584;451585 356894;356895;356896;356897;356898;356899;356900;356901;356902 356897 9 TTPNSGDVQVTEDAVRR Unmodified 1843.9024 0.90241781 1351 P35269 GTF2F1 General transcription factor IIF subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.083 41.261 3 1.5381E-14 45720 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 93.51 83.979 568510000 0 0 0 27487000 30679000 45918000 50705000 36207000 34990000 44955000 59577000 73121000 49828000 35768000 79278000 53788 1351 48296 451586;451587;451588;451589;451590;451591;451592;451593;451594;451595;451596;451597 356903;356904;356905;356906;356907;356908;356909;356910;356911;356912;356913;356914 356903 12 TTPPMLDSDGSFFLYSK Oxidation (M) 1920.8815 0.88153093 749 P01859 IGHG2 Ig gamma-2 chain C region yes yes 0 1 0 By MS/MS 10 0 1 1 83.877 84.068 2 0.00051369 96919 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 54.524 43.312 10900000 0 0 0 0 0 0 0 10900000 0 0 0 0 0 0 0 53789 749 48297 451598 356915 356915 905 1 TTPPMLDSDGSFFLYSK Unmodified 1904.8866 0.88661631 749 P01859 IGHG2 Ig gamma-2 chain C region yes yes 0 0 0 By MS/MS 10 0 1 1 88.121 88.318 2 0.00077977 102389 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 54.524 43.312 4524000 0 0 0 0 0 0 0 4524000 0 0 0 0 0 0 0 53790 749 48297 451599 356916 356916 1 TTPPVLDSDGSFFLYSK Unmodified 1872.9145 0.91454562 748 P01857 IGHG1 Ig gamma-1 chain C region yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 87.477 87.549 2 0.00038427 101932 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 60.628 48.415 81450000 0 0 0 12202000 4964000 0 1425000 18820000 4288500 14525000 9406900 6388300 3755800 2014000 3660800 53791 748 48298 451600;451601;451602;451603;451604;451605;451606;451607;451608;451609;451610;451611 356917;356918;356919;356920;356921;356922;356923;356924;356925;356926;356927;356928 356925 12 TTPSATSLPQTVVMTSPVTLTSQTTK Oxidation (M) 2692.3841 0.38407691 1080 P18846 ATF1 Cyclic AMP-dependent transcription factor ATF-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 2 1 1 1 1 80.896 80.986 3 1.6546E-19 93656 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 67.33 57.743 180470000 0 0 0 0 14582000 15089000 14661000 0 13884000 46956000 22599000 0 11085000 12824000 28789000 53792 1080 48299 451612;451613;451614;451615;451616;451617;451618;451619;451620;451621 356929;356930;356931;356932;356933;356934;356935;356936;356937;356938;356939 356931 1557 9 TTPSATSLPQTVVMTSPVTLTSQTTK Unmodified 2676.3892 0.38916229 1080 P18846 ATF1 Cyclic AMP-dependent transcription factor ATF-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 84.987 85.093 3 1.0573E-10 98810 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 56.688 49.495 137900000 0 0 0 0 9938300 10427000 6454800 8637100 6984700 12965000 14771000 14683000 6479100 11633000 34923000 53793 1080 48299 451622;451623;451624;451625;451626;451627;451628;451629;451630;451631;451632 356940;356941;356942;356943;356944;356945;356946;356947;356948;356949;356950;356951 356950 12 TTPSQFSTLK Unmodified 1108.5764 0.57643921 2891 Q6KC79 NIPBL Nipped-B-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 42.212 42.376 2 0.029678 46164 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.272 24.49 44143000 0 0 0 2643600 2460700 3153200 3402300 4544500 0 3993500 5936000 7503000 0 4535900 5970100 53794 2891 48300 451633;451634;451635;451636;451637;451638;451639;451640;451641;451642 356952;356953;356954 356954 3 TTPSVVAFTADGER Unmodified 1449.71 0.70997257 1399 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.96 64.052 2 6.9843E-19 72469 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 127.7 114.82 363990000 0 0 0 17116000 15356000 19682000 21432000 18671000 15481000 29507000 44171000 47726000 25610000 31459000 77781000 53795 1399 48301 451643;451644;451645;451646;451647;451648;451649;451650;451651;451652;451653;451654 356955;356956;356957;356958;356959;356960;356961;356962;356963;356964;356965;356966 356958 12 TTPSVVAFTADGERLVGMPAK Oxidation (M) 2162.1042 0.10415408 1399 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 1 1 By MS/MS By matching By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 79.464 79.578 3 7.7376E-06 91991 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 55.206 39.785 34187000 0 0 0 0 0 4470900 1723100 0 0 10268000 0 0 4110600 0 13614000 53796 1399 48302 451655;451656;451657;451658;451659 356967;356968 356967 2175 2 TTPSYVAFTDTER Unmodified 1486.694 0.69398816 934;908;1743;1047 P11142;P0DMV9;P0DMV8;P17066;P48741;P54652 HSPA8;HSPA1B;HSPA1A;HSPA6;HSPA7;HSPA2 Heat shock cognate 71 kDa protein;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7;Heat shock-related 70 kDa protein 2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 25 2 2 2 3 2 2 2 2 2 2 2 2 61.649 61.748 2;3 8.7546E-10 70182 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 117.02 100.35 10146000000 0 0 0 421200000 389680000 471030000 554560000 548850000 333220000 725830000 1240500000 1292200000 675870000 1226000000 2267200000 53797 934;908;1047;1743 48303 451660;451661;451662;451663;451664;451665;451666;451667;451668;451669;451670;451671;451672;451673;451674;451675;451676;451677;451678;451679;451680;451681;451682;451683;451684 356969;356970;356971;356972;356973;356974;356975;356976;356977;356978;356979;356980;356981;356982;356983;356984;356985;356986;356987;356988;356989;356990;356991;356992;356993;356994;356995;356996;356997;356998;356999;357000;357001;357002;357003;357004 356983 32 TTPSYVAFTDTERLIGDAAK Unmodified 2155.0797 0.079713469 934;908;1743 P11142;P0DMV9;P0DMV8;P54652 HSPA8;HSPA1B;HSPA1A;HSPA2 Heat shock cognate 71 kDa protein;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock-related 70 kDa protein 2 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.5 3.61 6 1 3 2 3 2 1 1 1 89.363 85.996 3 1.9134E-37 107715 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.271 82.501 350050000 45579000 232310000 25696000 0 0 0 0 0 0 6905500 6913700 0 0 0 32651000 53798 934;908;1743 48304 451685;451686;451687;451688;451689;451690;451691;451692;451693;451694 357005;357006;357007;357008;357009;357010;357011;357012;357013 357007 9 TTPTLGLEEVLSSR Unmodified 1501.7988 0.79878758 332 O43474 KLF4 Krueppel-like factor 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 84.592 84.669 2 0.00038309 97747 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 73.435 58.175 108480000 0 0 0 6159200 0 0 12304000 13579000 11226000 0 0 0 10028000 15541000 39645000 53799 332 48305 451695;451696;451697;451698;451699;451700;451701 357014;357015;357016;357017;357018;357019;357020 357016 7 TTPTPSTNSVLSTSTNR Unmodified 1762.8697 0.86972069 3040 Q7KZI7 MARK2 Serine/threonine-protein kinase MARK2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 47.093 47.199 2 0.00014728 52906 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 82.069 73.065 50592000 0 0 0 0 3908400 7303900 6883600 5009400 4282500 6776600 10434000 0 5993200 0 0 53800 3040 48306 451702;451703;451704;451705;451706;451707;451708;451709 357021;357022;357023;357024;357025;357026;357027;357028 357025 6 TTPTQPSEQK Unmodified 1115.5459 0.54586736 621 O95104 SCAF4 Splicing factor, arginine/serine-rich 15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.6742 7.8015 2 1.8745E-09 5671 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 157.91 110.47 221700000 0 0 0 6483500 9580800 8147400 12118000 12248000 11980000 17685000 54748000 35991000 17526000 15906000 19288000 53801 621 48307 451710;451711;451712;451713;451714;451715;451716;451717;451718;451719;451720;451721 357029;357030;357031;357032;357033;357034;357035;357036;357037;357038;357039;357040;357041;357042 357035 13 TTPYQIACGISQGLADNTVIAK Unmodified 2320.1733 0.17329628 1209 P26639 TARS Threonine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.78 3.79 3 2 4 4 1 1 1 1 1 92.641 90.628 2;3 4.1349E-49 112135 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 164.01 150.87 508410000 0 472210000 4176200 0 0 0 0 0 0 2640700 5916200 0 0 2880200 20594000 53802 1209 48308 451722;451723;451724;451725;451726;451727;451728;451729;451730 357043;357044;357045;357046;357047;357048;357049 357045 7 TTPYQVAAEISQELAESTVIAK Unmodified 2348.2111 0.21112157 12 A2RTX5 TARSL2 Probable threonine--tRNA ligase 2, cytoplasmic yes yes 0 0 0 By MS/MS 2 0 1 1 102.42 97.708 3 2.6578E-12 120692 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 56.48 50.253 12485000 0 12485000 0 0 0 0 0 0 0 0 0 0 0 0 0 53803 12 48309 451731 357050 357050 1 TTQEEQLR Unmodified 1003.4934 0.49343786 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 11.394 11.49 2 0.0049933 9530 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 114.6 77.044 78819000 0 0 0 6675200 4939000 9744700 6224200 0 5582700 10728000 10043000 0 13407000 11476000 0 53804 965 48310 451732;451733;451734;451735;451736;451737;451738;451739;451740 357051;357052;357053;357054;357055;357056;357057 357055 4 TTQEEQLRQQITEK Unmodified 1730.8799 0.87989145 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 21 1 2 1 2 2 2 2 2 2 1 2 2 39.969 40.179 2;3 4.0646E-31 44273 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 161.48 127.52 373060000 0 0 0 11593000 14889000 24174000 23543000 16501000 20859000 44514000 38243000 65148000 6897200 41020000 65679000 53805 965 48311 451741;451742;451743;451744;451745;451746;451747;451748;451749;451750;451751;451752;451753;451754;451755;451756;451757;451758;451759;451760;451761 357058;357059;357060;357061;357062;357063;357064;357065;357066 357066 6 TTQFSCTLGEK Unmodified 1270.5864 0.58635197 2054 Q01469 FABP5 Fatty acid-binding protein, epidermal yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.65 40.828 2 0.00047862 45110 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 83.948 70.178 484960000 0 0 0 287300000 16014000 18313000 12045000 21456000 9780900 20804000 28274000 19944000 24710000 15272000 11048000 53806 2054 48312 451762;451763;451764;451765;451766;451767;451768;451769;451770;451771;451772;451773 357067;357068;357069;357070;357071;357072;357073;357074;357075;357076;357077 357071 11 TTQIPQYLFEEGYTNK Unmodified 1930.9313 0.93125832 384 O60231 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 3 1 1 1 1 1 1 1 1 1 1 1 1 82.184 81.379 2;3 7.3252E-46 100575 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 200.93 191.74 486160000 0 384360000 0 2111200 5295900 8172900 4682200 8393000 6009100 13393000 13979000 10984000 6190500 5849500 16739000 53807 384 48313 451774;451775;451776;451777;451778;451779;451780;451781;451782;451783;451784;451785;451786;451787;451788 357078;357079;357080;357081;357082;357083;357084;357085;357086;357087;357088 357081 10 TTQLIEMLHADMNVPFPEGFVIANDVDNK Unmodified 3257.5737 0.57368537 2168 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 99.671 93.931 3 7.0405E-35 118580 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.312 84.966 18989000 15233000 3755900 0 0 0 0 0 0 0 0 0 0 0 0 0 53808 2168 48314 451789;451790 357089;357090;357091 357091 3 TTQLLFLK Unmodified 962.58007 0.58006802 596 O94874 UFL1 E3 UFM1-protein ligase 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.999 77.094 2 0.017995 89644 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 64.803 44.248 20000000 0 0 0 1953300 0 1531900 1458100 2061400 1351100 1525000 2188100 2082200 1455300 1373300 3020200 53809 596 48315 451791;451792;451793;451794;451795;451796;451797;451798;451799;451800;451801 357092;357093 357093 2 TTQQIDLQGPGPWGFR Acetyl (Protein N-term) 1841.906 0.90604662 119 O00151 PDLIM1 PDZ and LIM domain protein 1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 90.173 90.261 2 2.2883E-08 104806 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 109.6 85.612 54199000 0 0 0 0 1948600 2009700 2408400 0 0 4670500 7982000 7271800 0 5399100 22508000 53810 119 48316 451802;451803;451804;451805;451806;451807;451808;451809 357094;357095;357096;357097;357098;357099;357100;357101;357102 357096 9 TTQSGQMSGEGK Unmodified 1209.5296 0.52956537 2620 Q16630 CPSF6 Cleavage and polyadenylation specificity factor subunit 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 6.072 6.1274 2 0.00026134 5311 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.055 80.069 7527500 0 0 0 1098800 0 1815700 2085200 0 1357900 492070 0 677850 0 0 0 53811 2620 48317 451810;451811;451812;451813;451814;451815;451816;451817;451818 357103;357104;357105;357106;357107;357108 357105 6 TTQVPQFILDDFIQNDR Unmodified 2049.0167 0.016719282 2152 Q08211 DHX9 ATP-dependent RNA helicase A yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 95.497 95.63 2 0.00023263 110985 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.563 53.002 3808300 0 0 0 0 0 0 0 0 0 1520200 0 0 0 0 2288100 53812 2152 48318 451819;451820 357109;357110 357110 2 TTSASSHLNK Acetyl (Protein N-term) 1086.5306 0.53055165 1012 P15104 GLUL Glutamine synthetase yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 15.386 15.25 2 0.0004941 14971 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 105.52 73.586 145320000 0 25397000 0 64379000 2660200 0 1738200 5286400 0 5612600 15380000 6689600 6685300 5528100 5958900 53813 1012 48319 451821;451822;451823;451824;451825;451826;451827;451828;451829;451830;451831 357111;357112;357113;357114;357115;357116;357117;357118;357119;357120 357119 10 TTSEELACPREDLSVARK Unmodified 2061.0161 0.016067355 3963 Q96QU8 XPO6 Exportin-6 yes yes 0 0 2 By matching By MS/MS 2 0 2 1 1 53.722 47.688 4 0.010683 59791 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 33.697 23.039 17433000 4428500 0 13004000 0 0 0 0 0 0 0 0 0 0 0 0 53814 3963 48320 451832;451833 357121 357121 1 TTSEIFLSSTAEGADLR Unmodified 1796.8792 0.87922275 3250 Q8IWZ3 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.548 76.602 2 1.0773E-18 88096 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 124.86 105.73 83497000 0 0 0 2782600 3636900 5487300 4731300 7751500 7477700 0 9366600 11218000 7037400 7235900 16772000 53815 3250 48321 451834;451835;451836;451837;451838;451839;451840;451841;451842;451843;451844 357122;357123;357124;357125;357126;357127;357128;357129;357130;357131 357125 10 TTSESSSSPSASLK Unmodified 1367.6416 0.64161824 3775 Q96CB8 INTS12 Integrator complex subunit 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 17.799 18.017 2 0.0009315 17415 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 62.466 36.082 74520000 0 0 0 0 5643100 4921700 5641400 6563800 4521400 6332200 6449600 12401000 7192700 5311400 9541900 53816 3775 48322 451845;451846;451847;451848;451849;451850;451851;451852;451853;451854;451855;451856 357132;357133;357134;357135;357136;357137;357138;357139;357140 357135 6 TTSGALFPSLVPGSR Acetyl (Protein N-term) 1530.8042 0.80420731 2597 Q16186 ADRM1 Proteasomal ubiquitin receptor ADRM1 yes yes 1 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 91.496 91.568 2 2.3147E-23 106554 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 144.1 125.79 183150000 0 0 0 7133400 8240500 10157000 10137000 7797900 8475500 18951000 23572000 23868000 11260000 14763000 38792000 53817 2597 48323 451857;451858;451859;451860;451861;451862;451863;451864;451865;451866;451867;451868 357141;357142;357143;357144;357145;357146;357147;357148;357149;357150;357151;357152;357153;357154;357155 357152 15 TTSGALFPSLVPGSRGASNK Acetyl (Protein N-term) 1988.0327 0.032703697 2597 Q16186 ADRM1 Proteasomal ubiquitin receptor ADRM1 yes yes 1 0 1 By MS/MS 2 0 1 1 88.763 80.633 2 1.3544E-17 104831 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 125.28 115.1 13733000 13733000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53818 2597 48324 451869 357156 357156 1 TTSHMNGHVTEESDSEVK Acetyl (Protein N-term) 2028.8695 0.8694627 3325 Q8N3R9 MPP5 MAGUK p55 subfamily member 5 yes yes 1 0 0 By MS/MS 2.5 0.5 1 1 2 32.62 28.113 3 0.00087829 37086 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 51.798 41.633 8255000 0 8255000 0 0 0 0 0 0 0 0 0 0 0 0 0 53819 3325 48325 451870;451871 357157 357157 1 TTSILCLAR Unmodified 1033.559 0.559015 1348 P35250 RFC2 Replication factor C subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.778 66.862 2 0.030157 77689 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 48.283 6.6307 87909000 0 0 0 2842100 4583100 7270100 5176600 5211100 4688100 7812400 8070000 13294000 11376000 6972500 10612000 53820 1348 48326 451872;451873;451874;451875;451876;451877;451878;451879;451880;451881;451882;451883 357158 357158 1 TTSIRQFTSSSSIK Acetyl (Protein N-term) 1583.8155 0.81550028 84 CON__Q04695;Q04695 KRT17 Keratin, type I cytoskeletal 17 yes no 1 0 1 By MS/MS 10 0 1 1 65.469 65.667 2 0.00036151 74391 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 77.062 29.124 + 4838400 0 0 0 0 0 0 0 0 0 0 0 0 0 4838400 0 53821 84 48327 451884 357159 357159 1 TTSLCAGPSASK Unmodified 1178.5601 0.56013721 4215 Q9BWU0 SLC4A1AP Kanadaptin yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 20.665 20.863 2 0.022148 20483 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.625 20.53 24426000 0 0 0 0 3306500 0 0 0 2699800 4759300 0 0 0 6549800 7110300 53822 4215 48328 451885;451886;451887;451888;451889 357160 357160 1 TTSNFSGK Unmodified 840.39775 0.39774656 410 O60524 NEMF Nuclear export mediator factor NEMF yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 7.696 4.317 2 0.01846 6402 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.19 107.19 40318000 5048200 35270000 0 0 0 0 0 0 0 0 0 0 0 0 0 53823 410 48329 451890;451891 357161 357161 0 TTSNNTYEVEK Unmodified 1284.5834 0.58337508 217 O14802 POLR3A DNA-directed RNA polymerase III subunit RPC1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 17.214 17.429 2 0.00063118 17098 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 94.309 73.009 40770000 0 0 0 0 1927400 3174500 2488400 2450000 2227500 4006700 4878700 6066300 4419700 3575100 5555900 53824 217 48330 451892;451893;451894;451895;451896;451897;451898;451899;451900;451901;451902 357162;357163;357164;357165;357166 357165 5 TTSPLEEEEREIK Unmodified 1559.7679 0.76788138 4976 Q9UKV3 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 2 1 1 48.572 47.887 3 0.0024152 52605 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.001 43.714 216110000 0 91362000 0 7957000 8650400 0 10685000 8565000 7273300 13035000 0 18820000 20141000 12843000 16774000 53825 4976 48331 451903;451904;451905;451906;451907;451908;451909;451910;451911;451912;451913;451914;451915 357167;357168;357169;357170;357171;357172;357173 357169 6 TTSSAIYMNLASHIQPGTVNR Oxidation (M) 2276.1219 0.12192941 3594 Q8WXI9 GATAD2B Transcriptional repressor p66-beta yes yes 0 1 0 By MS/MS By MS/MS By matching By matching By MS/MS 10 0 5 1 1 1 1 1 76.226 76.357 3 0.00016956 87740 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.349 34.347 29199000 0 0 0 0 0 4852300 0 5062100 0 5460700 0 0 3922200 0 9901500 53826 3594 48332 451916;451917;451918;451919;451920 357174 357174 5093 1 TTSSANNPNLMYQDECDRR Unmodified 2270.9644 0.96444249 3670 Q92841 DDX17 Probable ATP-dependent RNA helicase DDX17 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 38.242 38.413 3 7.0287E-05 41665 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.33 46.73 86663000 0 0 0 4448200 4279300 8541400 4540800 6824500 3285500 7899300 9847700 13330000 8008900 0 15658000 53827 3670 48333 451921;451922;451923;451924;451925;451926;451927;451928;451929;451930;451931 357175;357176;357177;357178;357179;357180;357181;357182 357176 8 TTSSANNPNLMYQDECDRR Oxidation (M) 2286.9594 0.95935711 3670 Q92841 DDX17 Probable ATP-dependent RNA helicase DDX17 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 30.962 30.882 3 0.00042114 33880 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 42.913 39.419 13983000 0 0 0 0 4479500 0 5903800 0 3599400 0 0 0 0 0 0 53828 3670 48333 451932;451933;451934 357183 357183 5207 1 TTSVLERLK Unmodified 1045.6132 0.61315906 2933 Q6P3X3 TTC27 Tetratricopeptide repeat protein 27 yes yes 0 0 1 By MS/MS 2 0 1 1 52.527 44.512 2 0.04426 61276 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.429 73.951 27851000 27851000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53829 2933 48334 451935 357184 357184 1 TTSVSLTIGSSSPK Unmodified 1363.7195 0.71947463 3581 Q8WX93 PALLD Palladin yes yes 0 0 0 By MS/MS 2 0 1 1 58.162 52.331 2 0.028997 68363 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 43.306 23.472 104770000 0 104770000 0 0 0 0 0 0 0 0 0 0 0 0 0 53830 3581 48335 451936 357185 357185 1 TTTAAAVASTGPSSR Unmodified 1376.6896 0.68957148 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.135 24.34 2 2.3064E-05 24513 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 103.46 73.688 409500000 0 0 0 24946000 31388000 27298000 28038000 24953000 23135000 30114000 43493000 46060000 29269000 36963000 63843000 53831 1226 48336 451937;451938;451939;451940;451941;451942;451943;451944;451945;451946;451947;451948 357186;357187;357188;357189;357190;357191;357192;357193;357194;357195;357196;357197;357198 357189 12 TTTAAAVASTGPSSRSPSTLLPK Unmodified 2200.1699 0.16992546 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 67.762 61.782 3 0.00077307 81775 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.137 32.598 106050000 82177000 19574000 4302400 0 0 0 0 0 0 0 0 0 0 0 0 53832 1226 48337 451949;451950;451951 357199;357200 357200 2 TTTALISLSCEK Unmodified 1322.6752 0.67516697 5263 Q9Y620 RAD54B DNA repair and recombination protein RAD54B yes yes 0 0 0 By MS/MS 2 0 1 1 69.286 63.417 2 0.031169 80821 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 63.32 37.215 34082000 0 34082000 0 0 0 0 0 0 0 0 0 0 0 0 0 53833 5263 48338 451952 357201 357201 1 TTTAQDLVQHFK Unmodified 1387.7096 0.70957864 3953 Q96Q15 SMG1 Serine/threonine-protein kinase SMG1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 70.701 63.648 3 0.0001287 81198 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.593 64.457 64145000 32614000 31531000 0 0 0 0 0 0 0 0 0 0 0 0 0 53834 3953 48339 451953;451954 357202;357203 357202 1 TTTASPRTPGPK Unmodified 1212.6463 0.64625011 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 13.712 10.548 3 0.017544 15809 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.258 43.211 40070000 36002000 0 4067800 0 0 0 0 0 0 0 0 0 0 0 0 53835 5049 48340 451955;451956 357204;357205;357206;357207 357204 3 TTTESEVMK Oxidation (M) 1040.4696 0.46959087 953 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.2452 7.3689 2 0.0042333 5309 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 75.109 56.379 211250000 0 0 0 10805000 8212800 16238000 19235000 12387000 13302000 18605000 30990000 23680000 13971000 18476000 25349000 53836 953 48341 451957;451958;451959;451960;451961;451962;451963;451964;451965;451966;451967;451968 357208;357209;357210;357211;357212;357213;357214 357211 1231 3 TTTESEVMK Unmodified 1024.4747 0.47467625 953 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.179 16.356 2 0.0076455 16084 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 71.877 57.096 266610000 0 0 0 11388000 8873400 16398000 16962000 16181000 15960000 20544000 24645000 29031000 22302000 26416000 57906000 53837 953 48341 451969;451970;451971;451972;451973;451974;451975;451976;451977;451978;451979;451980 357215;357216;357217;357218;357219;357220;357221 357219 7 TTTGPPHLVPPQPLPR Unmodified 1706.9468 0.94678922 5045 Q9UNY4 TTF2 Transcription termination factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.016 67.099 3 0.0020547 76160 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.33 38.04 80486000 0 0 0 3438200 3927500 5532000 5258800 5247100 4581100 8657100 9262800 10069000 7432800 5667200 11412000 53838 5045 48342 451981;451982;451983;451984;451985;451986;451987;451988;451989;451990;451991;451992 357222;357223;357224;357225;357226;357227;357228;357229 357225 6 TTTGSYIANR Unmodified 1082.5356 0.53563702 1230 P28072 PSMB6 Proteasome subunit beta type-6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 22.369 22.56 2 0.0013917 22443 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 106.91 83.482 340270000 0 0 0 17563000 5345700 7156500 6988300 15357000 2877300 10966000 63912000 56042000 0 38042000 116020000 53839 1230 48343 451993;451994;451995;451996;451997;451998;451999;452000;452001;452002;452003 357230;357231;357232;357233;357234;357235;357236;357237;357238;357239;357240;357241 357238 11 TTTHVPPELGQIMDSETFEK Unmodified 2259.0729 0.072913532 550 O75844 ZMPSTE24 CAAX prenyl protease 1 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 87.353 82.544 3 2.6379E-16 102625 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 57.41 50.535 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53840 550 48344 452004 357242 357242 1 TTTITIESEGK Unmodified 1178.603 0.60304789 4517 Q9HCK8 CHD8 Chromodomain-helicase-DNA-binding protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.411 36.593 2 0.0074255 40291 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 54.066 30.036 55140000 0 0 0 3830700 3717100 3714600 4087900 3729300 3147800 5068200 4431900 6683400 4195200 4446900 8087200 53841 4517 48345 452005;452006;452007;452008;452009;452010;452011;452012;452013;452014;452015;452016 357243;357244;357245;357246;357247;357248;357249 357245 7 TTTIYEEDK Unmodified 1098.5081 0.50808487 2072 Q02241 KIF23 Kinesin-like protein KIF23 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 22.684 22.924 2 0.01448 22737 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 58.23 40.844 113520000 0 0 0 0 6803300 9046300 7416200 6609600 6502900 14760000 12800000 16871000 10812000 8304700 13594000 53842 2072 48346 452017;452018;452019;452020;452021;452022;452023;452024;452025;452026;452027 357250 357250 1 TTTLSGTAPAAGVVPSR Unmodified 1584.8471 0.84713476 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.64 1.67 1 21 1 1 2 2 2 1 2 2 2 2 2 2 1 55.089 54.96 2;3 2.0078E-70 62995 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 174.05 157.42 830680000 0 12141000 0 44827000 56208000 57173000 56679000 42146000 41176000 70268000 92520000 103380000 66912000 75688000 111560000 53843 1226 48347 452028;452029;452030;452031;452032;452033;452034;452035;452036;452037;452038;452039;452040;452041;452042;452043;452044;452045;452046;452047;452048;452049 357251;357252;357253;357254;357255;357256;357257;357258;357259;357260;357261;357262;357263;357264;357265;357266;357267;357268;357269;357270 357269 20 TTTLSGTAPAAGVVPSRVK Unmodified 1812.0105 0.010511692 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 60.446 54.466 3 1.2226E-07 73073 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.122 62.837 192440000 130590000 52479000 9369600 0 0 0 0 0 0 0 0 0 0 0 0 53844 1226 48348 452050;452051;452052 357271;357272;357273;357274 357273 3 TTTPGPSLSQGVSVDEK Unmodified 1701.8421 0.84210896 448 O60934 NBN Nibrin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52.828 52.328 2 7.9881E-25 59023 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 109.84 96.492 170000000 5041600 0 0 10766000 10519000 10176000 12558000 14014000 10780000 18141000 17650000 12324000 16817000 15630000 15588000 53845 448 48349 452053;452054;452055;452056;452057;452058;452059;452060;452061;452062;452063;452064;452065;452066 357275;357276;357277;357278;357279;357280;357281;357282;357283;357284;357285;357286;357287;357288;357289 357283 15 TTTPNAQATR Unmodified 1059.5309 0.530886 859 P08174 CD55 Complement decay-accelerating factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 8.5866 8.7148 2 0.0029838 7081 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 78.149 48.773 131370000 0 0 0 9606700 7884200 5819300 7169900 4396000 4971100 9230400 33198000 21355000 12032000 7570900 8131400 53846 859 48350 452067;452068;452069;452070;452071;452072;452073;452074;452075;452076;452077;452078 357290;357291;357292;357293;357294;357295;357296;357297;357298 357295 6 TTTSSGGLTISSLLK Unmodified 1464.8035 0.80353861 2805 Q5VIR6 VPS53 Vacuolar protein sorting-associated protein 53 homolog yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 83.093 81.992 2 0.00023778 95170 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 68.676 62.131 70522000 21203000 0 0 0 6244800 8592300 5877100 7870200 6125400 0 0 0 0 14609000 0 53847 2805 48351 452079;452080;452081;452082;452083;452084;452085 357299;357300;357301;357302;357303 357301 4 TTTTAVISK Unmodified 920.51786 0.51786169 1717 P53602 MVD Diphosphomevalonate decarboxylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19.845 19.38 2 0.027409 20112 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 49.418 26.926 293290000 21186000 121320000 0 7618800 9392500 9865700 17612000 16723000 13590000 12706000 18794000 23131000 2648300 4907400 13790000 53848 1717 48352 452086;452087;452088;452089;452090;452091;452092;452093;452094;452095;452096;452097;452098;452099 357304;357305;357306;357307;357308;357309;357310;357311 357311 6 TTTTLIEPIRLGGISSTEEMDLK Unmodified 2504.3044 0.30437003 463 O75150 RNF40 E3 ubiquitin-protein ligase BRE1B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 90.959 85.797 3 1.1515E-24 108176 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.146 59.711 48089000 14765000 31219000 2104600 0 0 0 0 0 0 0 0 0 0 0 0 53849 463 48353 452100;452101;452102 357312;357313;357314;357315;357316;357317 357312 6 TTTTNTQVEGDDEAAFLER Unmodified 2096.9498 0.94982151 2117 Q05682 CALD1 Caldesmon yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.564 64.653 2 5.6406E-50 73905 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 170.56 156.88 148620000 0 0 0 5914600 6885100 6343100 7173300 6867700 6697600 13362000 26007000 21191000 12428000 13053000 22697000 53850 2117 48354 452103;452104;452105;452106;452107;452108;452109;452110;452111;452112;452113;452114 357318;357319;357320;357321;357322;357323;357324;357325;357326;357327;357328;357329 357327 12 TTTTTFK Acetyl (Protein N-term) 840.4229 0.42289868 4956 Q9UK76 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed yes yes 1 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.2 3.6 1 4 1 1 1 1 1 45.08 46.572 1;2 0.003707 32952 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.32 99.314 98502000 35335000 0 0 0 0 0 0 0 0 0 12642000 12391000 0 10817000 27318000 53851 4956 48355 452115;452116;452117;452118;452119 357330;357331;357332;357333 357330 4 TTTVNIGSISTADGSALVK Unmodified 1833.9684 0.96837211 3749 Q96B26 EXOSC8 Exosome complex component RRP43 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.869 76.964 2 0.00013524 88453 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.372 66.466 46100000 0 0 0 1338000 0 2338400 3063300 2232500 2072800 5717100 5244800 6012700 2566400 5215300 10299000 53852 3749 48356 452120;452121;452122;452123;452124;452125;452126;452127;452128;452129;452130 357334;357335;357336;357337;357338 357335 5 TTTWEDPRLK Unmodified 1245.6354 0.63535107 1515 P46934 NEDD4 E3 ubiquitin-protein ligase NEDD4 no no 0 0 1 By MS/MS 2 0 1 1 46.265 42.414 3 0.03877 53592 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 60.102 48.509 14609000 0 0 14609000 0 0 0 0 0 0 0 0 0 0 0 0 53853 1515 48357 452131 357339 357339 0 TTTWNDPRVPSEGPK Unmodified 1683.8216 0.82164829 694 O95817 BAG3 BAG family molecular chaperone regulator 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 45.405 45.719 3 0.010842 51370 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 34.82 14.439 53751000 0 0 0 0 0 10293000 0 0 14371000 0 0 0 0 0 29087000 53854 694 48358 452132;452133;452134 357340;357341;357342 357340 2 TTTYTQGVPPSQGDLEYQMSTTAR Unmodified 2631.2123 0.21226056 1010 P14923 JUP Junction plakoglobin yes yes 0 0 0 By matching By matching By MS/MS By matching 10 0 4 1 1 1 1 70.84 70.644 3 0.0045573 81474 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 24.514 21.673 16368000 0 0 0 3257700 1597800 0 0 9983900 0 0 0 0 1529100 0 0 53855 1010 48359 452135;452136;452137;452138 357343 357343 1 TTVDSVEGNASK Unmodified 1206.5728 0.57281039 2676 Q3V6T2 CCDC88A Girdin yes yes 0 0 0 By MS/MS 10 0 1 1 17.507 18.061 2 0.031852 17281 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.684 16.898 2588200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2588200 53856 2676 48360 452139 357344 357344 1 TTVEPTPGK Unmodified 928.48656 0.48656157 4505 Q9HC35 EML4 Echinoderm microtubule-associated protein-like 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 16.335 12.223 2 0.020773 13619 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 82.279 48.728 9677300 9677300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53857 4505 48361 452140;452141;452142;452143;452144;452145 357345;357346;357347;357348;357349;357350 357345 6 TTVHNIPGFDSIK Unmodified 1427.7409 0.74087877 4680 Q9NVR5 DNAAF2 Protein kintoun yes yes 0 0 0 By MS/MS By MS/MS 2 0 4 2 2 71.012 65.053 2;3 0.021287 86544 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.069 34.356 126300000 97142000 0 29157000 0 0 0 0 0 0 0 0 0 0 0 0 53858 4680 48362 452146;452147;452148;452149 357351;357352 357351 1 TTVIQDGIK Unmodified 973.54441 0.5444108 2189 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.537 36.718 2 0.006156 40622 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 75.825 43.891 120630000 0 0 0 7070900 8635700 10543000 7995000 7462900 5834300 10350000 11736000 12201000 11964000 10976000 15864000 53859 2189 48363 452150;452151;452152;452153;452154;452155;452156;452157;452158;452159;452160;452161 357353;357354;357355;357356;357357;357358;357359;357360;357361;357362 357358 10 TTVISAVGTIVK Unmodified 1187.7125 0.71253876 4907 Q9UHR5 SAP30BP SAP30-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77.723 76.744 2 6.4102E-06 95834 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.11 91.368 390850000 48094000 99932000 2905200 8302800 10958000 14026000 14406000 14906000 13405000 27361000 29125000 35252000 12119000 16591000 43470000 53860 4907 48364 452162;452163;452164;452165;452166;452167;452168;452169;452170;452171;452172;452173;452174;452175;452176 357363;357364;357365;357366;357367;357368;357369;357370;357371;357372;357373;357374;357375;357376;357377;357378 357366 16 TTVLLADINDFNTVNEIYK Unmodified 2182.1158 0.11576462 1700 P52758 HRSP12 Ribonuclease UK114 yes yes 0 0 0 By MS/MS 2 0 1 1 96.911 92.09 2 1.4257E-36 114115 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.92 96.665 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53861 1700 48365 452177 357379 357379 1 TTVPNAESK Unmodified 945.47673 0.47672516 3465 Q8NI27 THOC2 THO complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 12.003 12.13 2 0.0036824 10845 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 95.741 75.042 121080000 0 0 0 6941400 10417000 10401000 11246000 9201300 10696000 11956000 8100400 17054000 11948000 13116000 0 53862 3465 48366 452178;452179;452180;452181;452182;452183;452184;452185;452186;452187;452188 357380;357381;357382;357383;357384;357385;357386;357387;357388;357389 357383 8 TTVPQLLASVQR Unmodified 1311.751 0.75104953 1802 P58107 EPPK1 Epiplakin yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By matching By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 80.179 80.226 2 0.030368 92860 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 53.683 39.476 52635000 0 0 0 3873800 3105100 3610700 4938700 0 3241300 6178900 5686500 6784900 4057700 4316000 6841400 53863 1802 48367 452189;452190;452191;452192;452193;452194;452195;452196;452197;452198;452199 357390;357391;357392 357392 2 TTVQQEPLESGAK Unmodified 1386.6991 0.69907354 1592 P49750 YLPM1 YLP motif-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 28.727 29.008 2 4.6562E-08 30114 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 125.48 102.05 35180000 0 0 0 0 5061000 0 2968200 0 0 0 0 6896500 6693900 5399700 8160900 53864 1592 48368 452200;452201;452202;452203;452204;452205 357393;357394;357395;357396;357397;357398 357395 6 TTVSEAEHPLLCEGTRR Unmodified 1954.9531 0.95307317 34 A7E2V4 ZSWIM8 Zinc finger SWIM domain-containing protein 8 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 1 2 2 2 1 1 2 2 2 2 41.323 41.608 3;4 0.00083554 46407 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 51.695 42.579 157460000 0 0 0 0 7325400 8667400 12585000 14668000 12703000 10881000 4269600 21180000 21457000 16748000 26978000 53865 34 48369 452206;452207;452208;452209;452210;452211;452212;452213;452214;452215;452216;452217;452218;452219;452220;452221;452222;452223 357399;357400;357401;357402;357403;357404;357405;357406 357402 5 TTVTELPQTSHVSFSEPDIPSSK Unmodified 2486.2177 0.21766351 4747 Q9NYP3 DONSON Protein downstream neighbor of Son yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 74.86 74.893 3 1.3633E-16 86338 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 61.222 53.12 61942000 0 0 0 3670800 4503700 7296300 5198800 5858500 5769800 8011000 6581600 9139400 0 5912100 0 53866 4747 48370 452224;452225;452226;452227;452228;452229;452230;452231;452232;452233 357407;357408;357409;357410;357411;357412;357413;357414;357415;357416;357417;357418 357412 12 TTVTPGPYMQAPK Oxidation (M) 1405.6912 0.69115139 5384 yes yes 0 1 0 By MS/MS 10 0 1 1 34.357 34.518 2 0.02032 37946 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 49.418 7.2277 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53867 5384 48371 452234 357419 357419 6760 1 TTVVVHVDSK Acetyl (Protein N-term) 1125.603 0.60298831 5192 Q9Y4B6 VPRBP Protein VPRBP yes yes 1 0 0 By MS/MS By MS/MS 5 3.56 1 1 1 2 1 51.477 46.142 2 1.3171E-05 59868 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.86 102.89 40805000 0 40805000 0 0 0 0 0 0 0 0 0 0 0 0 0 53868 5192 48372 452235;452236;452237 357420;357421;357422 357422 3 TTVVYPATEK Unmodified 1107.5812 0.58119023 3773 Q96C86 DCPS m7GpppX diphosphatase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 34.002 32.592 2 0.0031342 41428 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.635 63.838 139140000 11919000 88004000 0 0 0 5849100 3322000 0 0 0 6540600 0 0 5711900 17798000 53869 3773 48373 452238;452239;452240;452241;452242;452243;452244;452245;452246;452247 357423;357424;357425;357426;357427;357428;357429;357430;357431;357432 357426 10 TTWGDGGENSPCNVVSK Unmodified 1806.7843 0.7842765 122 O00161 SNAP23 Synaptosomal-associated protein 23 yes yes 0 0 0 By MS/MS 2 0 1 1 51.721 45.948 2 2.6771E-05 59584 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.93 105.31 35140000 0 35140000 0 0 0 0 0 0 0 0 0 0 0 0 0 53870 122 48374 452248 357433 357433 1 TTYDQMYNDLLRK Unmodified 1659.7927 0.79265635 4539 Q9NP77 SSU72 RNA polymerase II subunit A C-terminal domain phosphatase SSU72 yes yes 0 0 1 By MS/MS 10 0 1 1 73.963 74.302 3 0.00041611 85147 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.966 55.99 9544700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9544700 53871 4539 48375 452249 357434 357434 1 TTYDSSLSSYTVPLEK Unmodified 1789.8622 0.8621757 3576 Q8WWM7 ATXN2L Ataxin-2-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 75.905 75.373 2 1.9755E-20 87144 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 141.58 141.58 557930000 0 259100000 0 12436000 15896000 18015000 20157000 19742000 24504000 25078000 31180000 35292000 25107000 24328000 47104000 53872 3576 48376 452250;452251;452252;452253;452254;452255;452256;452257;452258;452259;452260;452261;452262;452263 357435;357436;357437;357438;357439;357440;357441;357442;357443;357444;357445;357446;357447 357445 13 TTYFEIFTAGAGTGEVEVVIQDPMGQK Unmodified 2887.395 0.39497595 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS 3 0 1 1 98.163 94.644 3 0.048918 98132 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 16.447 13.719 3635400 3635400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53873 1124 48377 452264 357448 357448 1 TTYGGAAAAVR Unmodified 1036.5302 0.53015772 1600 P49790 NUP153 Nuclear pore complex protein Nup153 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 26.47 26.708 2 0.0053119 28419 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 59.35 48.658 385880000 0 0 0 0 28860000 27477000 38357000 44785000 28832000 38897000 32443000 58590000 32871000 22430000 32334000 53874 1600 48378 452265;452266;452267;452268;452269;452270;452271;452272;452273;452274;452275 357449;357450;357451;357452;357453;357454;357455;357456;357457 357449 7 TTYLEDLPPPPEYELAPSK Unmodified 2159.0674 0.067417448 2197 Q12849 GRSF1 G-rich sequence factor 1 yes yes 0 0 0 By MS/MS 2 0 1 1 88.234 83.392 2 0.00017046 103635 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.708 60.865 23405000 0 23405000 0 0 0 0 0 0 0 0 0 0 0 0 0 53875 2197 48379 452276 357458;357459 357458 2 TTYLVLDEADR Unmodified 1294.6405 0.64049603 1062 P17844 DDX5 Probable ATP-dependent RNA helicase DDX5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 66.329 66.508 2 0.00025931 76657 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 91.584 77.581 161380000 0 0 0 0 10995000 0 14260000 0 10516000 0 18888000 25333000 19055000 18105000 44226000 53876 1062 48380 452277;452278;452279;452280;452281;452282;452283;452284 357460;357461;357462;357463;357464;357465;357466 357466 6 TTYMDPTGK Oxidation (M) 1028.4485 0.4484615 4970 Q9UKK9 NUDT5 ADP-sugar pyrophosphatase yes yes 0 1 0 By MS/MS 1 0 1 1 106.77 112.03 2 0.0046204 92767 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 110.22 98.025 114250000 114250000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53877 4970 48381 452285 357467 357467 6316 1 TTYMDPTGK Unmodified 1012.4535 0.45354688 4970 Q9UKK9 NUDT5 ADP-sugar pyrophosphatase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 27.574 27.643 2 0.0090555 29137 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 67.838 56.965 213190000 0 0 0 17130000 13938000 34832000 23266000 14712000 15924000 32095000 0 61289000 0 0 0 53878 4970 48381 452286;452287;452288;452289;452290;452291;452292;452293 357468 357468 1 TTYPIDETMIHNGPPHNSNFGYSYAK Unmodified 2953.3341 0.33410703 2335 Q13630 TSTA3 GDP-L-fucose synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 5 3 1 1 79.259 72.881 3;4 3.0565E-92 93425 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 141.36 135.64 575930000 516490000 37105000 22329000 0 0 0 0 0 0 0 0 0 0 0 0 53879 2335 48382 452294;452295;452296;452297;452298 357469;357470;357471;357472 357470 3 TTYPIDETMIHNGPPHNSNFGYSYAK Oxidation (M) 2969.329 0.32902165 2335 Q13630 TSTA3 GDP-L-fucose synthase yes yes 0 1 0 By MS/MS 2 0 1 1 73.837 65.641 4 1.3068E-79 86742 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 139.28 137.27 197270000 197270000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53880 2335 48382 452299 357473;357474 357473 3806 2 TTYQALPCLPSMYGYPNR Unmodified 2130.9867 0.98668148 1721 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 96.6 90.089 3 0.017834 111122 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 19.071 6.1815 83751000 9161100 74590000 0 0 0 0 0 0 0 0 0 0 0 0 0 53881 1721 48383 452300;452301 357475 357475 1 TTYTTAYTFPGILK Unmodified 1575.8185 0.81846039 4433 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 83.771 83.923 2 0.00037061 96868 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.113 78.294 47862000 0 0 0 0 0 0 5392400 5170900 4338000 6492600 6155400 5725200 2802700 4523500 7261100 53882 4433 48384 452302;452303;452304;452305;452306;452307;452308;452309;452310 357476;357477;357478;357479;357480;357481;357482;357483;357484 357477 9 TVAAPSVFIFPPSDEQLK Unmodified 1945.0197 0.019679395 747 P01834 IGKC Ig kappa chain C region yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 2 1 1 1 2 1 2 3 1 1 1 1 89.842 89.908 2;3 6.6943E-12 104592 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 116.98 105.05 85968000 0 0 0 4202700 1264200 1410300 1388500 42060000 1327700 21812000 4383900 3106600 2067500 1013800 1930500 53883 747 48385 452311;452312;452313;452314;452315;452316;452317;452318;452319;452320;452321;452322;452323;452324;452325;452326;452327 357485;357486;357487;357488;357489;357490;357491;357492;357493;357494;357495 357493 10 TVAATNMNEESSR Oxidation (M) 1424.6202 0.62017129 4350;4576 Q9H1H9;Q9NQT8 KIF13A;KIF13B Kinesin-like protein KIF13A;Kinesin-like protein KIF13B no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 9.0546 9.214 2 0.00013348 6310 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 83.397 61.311 22602000 0 0 0 1931000 0 2416200 1843300 0 933070 1633900 4425100 3692200 2369700 1268400 2089300 53884 4350;4576 48386 452328;452329;452330;452331;452332;452333;452334;452335;452336;452337 357496;357497;357498;357499;357500;357501;357502 357499 5814 7 TVAATNMNEESSR Unmodified 1408.6253 0.62525667 4350;4576 Q9H1H9;Q9NQT8 KIF13A;KIF13B Kinesin-like protein KIF13A;Kinesin-like protein KIF13B no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 20.073 20.393 2 2.9511E-08 19832 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.06 77.388 27325000 0 0 0 0 0 0 2806300 3234500 0 0 7612100 0 0 5895100 7777000 53885 4350;4576 48386 452338;452339;452340;452341;452342;452343;452344 357503;357504;357505;357506;357507;357508;357509 357504 7 TVAATNMNETSSR Oxidation (M) 1396.6253 0.62525667 378;396 O43896;O60333;Q12756 KIF1C;KIF1B;KIF1A Kinesin-like protein KIF1C;Kinesin-like protein KIF1B;Kinesin-like protein KIF1A no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 9.0946 9.2255 2 1.2718E-08 6268 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 108.9 100.68 61272000 0 0 0 6661700 5162300 4400200 5477600 3168900 2652600 0 11768000 8699700 5703500 2983200 4593700 53886 378;396 48387 452345;452346;452347;452348;452349;452350;452351;452352;452353;452354;452355 357510;357511;357512;357513;357514;357515;357516;357517;357518;357519;357520 357514 485 10 TVAATNMNETSSR Unmodified 1380.6303 0.63034205 378;396 O43896;O60333;Q12756 KIF1C;KIF1B;KIF1A Kinesin-like protein KIF1C;Kinesin-like protein KIF1B;Kinesin-like protein KIF1A no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 20.074 20.279 2 2.5006E-51 20814 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 182.28 150.86 120020000 0 0 0 8139300 7104900 8621200 7151300 0 6249500 15743000 15600000 13770000 11083000 7893700 18666000 53887 378;396 48387 452356;452357;452358;452359;452360;452361;452362;452363;452364;452365;452366 357521;357522;357523;357524;357525;357526;357527;357528;357529;357530 357522 10 TVADSDESYMEK Unmodified 1373.5657 0.5656761 4492 Q9HAW4 CLSPN Claspin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 30.689 30.898 2 0.0059635 32470 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.82 57.015 19687000 0 0 0 0 1845500 0 2590600 0 2436500 0 3723700 0 0 3656300 5433800 53888 4492 48388 452367;452368;452369;452370;452371;452372 357531;357532;357533;357534 357532 4 TVADTFEK Unmodified 909.44436 0.4443624 4570 Q9NQG6 MIEF1 Mitochondrial dynamics protein MID51 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 28.141 28.369 2 0.025292 30633 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 58.815 34.183 82870000 0 0 0 0 6576600 9061700 8825200 0 8766900 0 0 16249000 13565000 9360100 10466000 53889 4570 48389 452373;452374;452375;452376;452377;452378;452379;452380 357535 357535 1 TVAEGHGDTLYVGTTR Unmodified 1675.8166 0.81656291 699 O95834 EML2 Echinoderm microtubule-associated protein-like 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 39.15 39.438 3 1.0926E-07 42526 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.018 68.581 76643000 0 0 0 6983600 0 0 4700600 4938300 0 0 15437000 12985000 5685700 7784400 18129000 53890 699 48390 452381;452382;452383;452384;452385;452386;452387;452388;452389 357536;357537;357538;357539;357540;357541;357542;357543 357537 8 TVAEVDSESLPSSSK Unmodified 1534.7362 0.7362469 1238 P28715 ERCC5 DNA repair protein complementing XP-G cells yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 42.04 42.3 2 8.9643E-31 46854 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 147.71 131.07 117840000 0 0 0 0 11239000 0 10678000 8158900 9525400 12573000 13790000 13835000 10154000 9294700 18592000 53891 1238 48391 452390;452391;452392;452393;452394;452395;452396;452397;452398;452399 357544;357545;357546;357547;357548;357549;357550;357551;357552;357553;357554 357553 11 TVAFPSTHPPR Unmodified 1208.6302 0.63020611 3915 Q96L91 EP400 E1A-binding protein p400 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 41.075 41.336 3 0.043523 46551 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 32.254 25.949 88286000 0 0 0 0 4945400 0 7921300 10196000 7227800 9783500 7561700 14388000 8035700 8258600 9968400 53892 3915 48392 452400;452401;452402;452403;452404;452405;452406;452407;452408;452409 357555 357555 1 TVAGGAWTYNTTSAVTVK Unmodified 1825.921 0.92102798 1850 P61513 RPL37A 60S ribosomal protein L37a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.55 2 2 8 2 2 1 1 1 1 1 1 1 1 70.962 69.076 2 4.3866E-73 87009 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 177.21 151.09 150180000 25229000 90675000 0 0 2055600 3637700 0 2442200 2280100 10449000 0 4995800 0 0 8415600 53893 1850 48393 452410;452411;452412;452413;452414;452415;452416;452417;452418;452419;452420;452421 357556;357557;357558;357559;357560;357561;357562;357563;357564;357565 357558 10 TVAGIPNFILK Unmodified 1171.6965 0.69649476 2823 Q5VW36 FOCAD Focadhesin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87.123 86.1 2 0.0002837 99550 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 93.143 77.481 244400000 27529000 23351000 2109500 0 15785000 24101000 13139000 17984000 18466000 23967000 16241000 24045000 8458900 8593600 20632000 53894 2823 48394 452422;452423;452424;452425;452426;452427;452428;452429;452430;452431;452432;452433;452434;452435;452436 357566;357567;357568;357569;357570;357571;357572;357573;357574;357575;357576;357577;357578 357568 12 TVAGQDAVIVLLGTR Unmodified 1511.8671 0.86714192 1262 P30043 BLVRB Flavin reductase (NADPH) yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 87.901 88.064 2 1.1226E-09 101802 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 92.925 74.613 23443000 0 0 0 0 0 0 0 1559200 1589700 0 4492900 4131100 0 2380300 9290000 53895 1262 48395 452437;452438;452439;452440;452441;452442 357579;357580;357581;357582;357583;357584 357579 6 TVALDGTLFQK Unmodified 1191.6499 0.6499385 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.39 3.7 5 1 12 1 3 2 1 1 1 1 1 1 1 1 1 1 1 1 74.948 73.503 2 0.0018726 89900 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 107.69 74.853 1058300000 22292000 687100000 22285000 12956000 14582000 30979000 21884000 19467000 17978000 32728000 31885000 39639000 27065000 27624000 49846000 53896 2431 48396 452443;452444;452445;452446;452447;452448;452449;452450;452451;452452;452453;452454;452455;452456;452457;452458;452459;452460 357585;357586;357587;357588;357589;357590;357591;357592;357593;357594;357595 357593 10 TVALWDLR Unmodified 972.53927 0.53926584 2615;2169 Q09028;Q16576 RBBP4;RBBP7 Histone-binding protein RBBP4;Histone-binding protein RBBP7 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 79.708 79.138 2 0.0047612 91620 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 133.12 51.82 1671400000 24332000 0 0 65992000 58515000 111250000 57725000 95667000 75476000 111000000 174510000 208230000 99956000 155490000 433250000 53897 2169;2615 48397 452461;452462;452463;452464;452465;452466;452467;452468;452469;452470;452471;452472;452473 357596;357597;357598;357599;357600;357601;357602;357603;357604;357605;357606;357607;357608;357609 357605 13 TVALWDLRNLK Unmodified 1327.7612 0.76122028 2615;2169 Q09028;Q16576 RBBP4;RBBP7 Histone-binding protein RBBP4;Histone-binding protein RBBP7 no no 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 87.703 81.234 3 0.021296 103779 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.004 34.603 15447000 5372900 10074000 0 0 0 0 0 0 0 0 0 0 0 0 0 53898 2169;2615 48398 452474;452475 357610;357611 357611 2 TVANLLSGK Unmodified 901.52328 0.52328142 2289 Q13428 TCOF1 Treacle protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.91 3.42 2 1 8 1 1 1 1 1 1 1 1 1 1 1 50.812 49.463 2 0.0082551 67824 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.64 36.75 839280000 261110000 9546900 22539000 46298000 0 0 0 50973000 0 57333000 74481000 85675000 76139000 64270000 90917000 53899 2289 48399 452476;452477;452478;452479;452480;452481;452482;452483;452484;452485;452486 357612;357613;357614;357615;357616;357617;357618;357619 357615 5 TVANMIK Oxidation (M) 791.42112 0.42112454 1946 P63208 SKP1 S-phase kinase-associated protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.71 2.89 3 1 20 1 2 1 1 2 2 2 2 2 2 2 1 1 2 1 13.334 12.897 2 0.032192 12001 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.776 33.487 996720000 94031000 624200000 29675000 8777500 14716000 16454000 22866000 12401000 15600000 30041000 32168000 27614000 12376000 24010000 31784000 53900 1946 48400 452487;452488;452489;452490;452491;452492;452493;452494;452495;452496;452497;452498;452499;452500;452501;452502;452503;452504;452505;452506;452507;452508;452509;452510 357620;357621;357622;357623;357624 357621 5 TVANMIK Unmodified 775.42621 0.42620992 1946 P63208 SKP1 S-phase kinase-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31.013 30.2 2 0.038141 39867 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.263 25.752 2728600000 572170000 1285700000 61436000 40354000 37240000 42549000 51863000 36253000 34030000 61107000 84387000 104190000 69538000 73197000 174680000 53901 1946 48400 452511;452512;452513;452514;452515;452516;452517;452518;452519;452520;452521;452522;452523;452524;452525 357625;357626;357627 357625 3 TVAPMPPAQDHK Unmodified 1290.6391 0.63905624 1134 P22102 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.26 3.26 5 1 21 2 3 1 1 1 2 2 2 1 2 2 2 2 2 2 26.954 26.121 2;3 0.0009182 28198 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 72.643 56.981 2172900000 59179000 1807700000 22286000 11284000 8418000 28065000 17625000 12959000 8795900 24825000 34739000 34298000 18083000 27452000 57171000 53902 1134 48401 452526;452527;452528;452529;452530;452531;452532;452533;452534;452535;452536;452537;452538;452539;452540;452541;452542;452543;452544;452545;452546;452547;452548;452549;452550;452551;452552 357628;357629;357630;357631;357632;357633;357634;357635;357636;357637;357638;357639;357640;357641;357642;357643;357644;357645;357646;357647;357648;357649;357650;357651;357652;357653;357654;357655 357643 25 TVAPMPPAQDHK Oxidation (M) 1306.634 0.63397086 1134 P22102 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 2.85 2.11 9 3 1 1 9 2 1 22.715 19.435 2;3 2.4109E-05 23273 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.4 88.535 177720000 1033800 159930000 2826200 0 0 0 0 0 0 0 0 0 0 0 13930000 53903 1134 48401 452553;452554;452555;452556;452557;452558;452559;452560;452561;452562;452563;452564;452565 357656;357657;357658;357659;357660;357661;357662;357663;357664;357665;357666;357667 357656 1626 12 TVAPVVTQAAPPTPTPPVPPAK Unmodified 2135.199 0.19904074 3025 Q70E73 RAPH1 Ras-associated and pleckstrin homology domains-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 2 1 1 1 75.794 75.862 3 2.1278E-07 87608 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 58.073 53.363 98060000 0 0 0 5650900 6929100 0 8359700 8244800 6548000 11373000 11193000 9117800 6192800 10485000 13966000 53904 3025 48402 452566;452567;452568;452569;452570;452571;452572;452573;452574;452575;452576;452577 357668;357669;357670;357671;357672;357673;357674;357675;357676;357677 357675 10 TVAQSQQLETNSQR Unmodified 1588.7805 0.78051176 1425 P40938 RFC3 Replication factor C subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 21.768 21.974 2;3 8.6554E-17 22847 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 123.2 105.76 881380000 0 0 0 51532000 51666000 78769000 72659000 58908000 53232000 81511000 95551000 99072000 94573000 64866000 79044000 53905 1425 48403 452578;452579;452580;452581;452582;452583;452584;452585;452586;452587;452588;452589;452590;452591;452592;452593;452594;452595;452596;452597;452598;452599;452600;452601 357678;357679;357680;357681;357682;357683;357684;357685;357686;357687;357688;357689;357690;357691 357681 13 TVAQSQQLETNSQRDFK Unmodified 1978.9708 0.97083172 1425 P40938 RFC3 Replication factor C subunit 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 36.572 35.465 3 1.1496E-18 37979 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.484 61.634 344000000 23116000 87506000 54913000 7472600 9762900 7724700 16358000 17231000 17324000 15307000 17100000 18046000 15731000 12866000 23544000 53906 1425 48404 452602;452603;452604;452605;452606;452607;452608;452609;452610;452611;452612;452613;452614;452615;452616;452617 357692;357693;357694;357695;357696;357697;357698;357699;357700;357701;357702;357703;357704;357705;357706;357707;357708 357697 17 TVASPGVTVEEAVEQIDIGGVTLLR Unmodified 2552.3697 0.36974748 1307 P31939 ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 3 2 1 100.28 95.221 2;3 2.4089E-78 119205 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 105.16 102.11 93002000 65396000 24439000 3167600 0 0 0 0 0 0 0 0 0 0 0 0 53907 1307 48405 452618;452619;452620;452621;452622;452623 357709;357710;357711;357712;357713;357714 357711 6 TVASPGVTVEEAVEQIDIGGVTLLRAAAK Unmodified 2893.5761 0.57605186 1307 P31939 ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes yes 0 0 1 By MS/MS 2 0 1 1 102.53 94.404 3 2.9211E-09 121422 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.256 38.814 14423000 14423000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53908 1307 48406 452624 357715;357716 357716 2 TVASQPISTQTLVEGENDEQSSTDQASAIK Unmodified 3133.4899 0.48987521 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.614 71.68 3 5.4446E-97 82507 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 122.78 120.03 148870000 0 0 0 5052700 11785000 16337000 10851000 9132800 6657300 16633000 13717000 16130000 13145000 11377000 18055000 53909 2775 48407 452625;452626;452627;452628;452629;452630;452631;452632;452633;452634;452635;452636 357717;357718;357719;357720;357721;357722;357723;357724;357725;357726;357727;357728 357718 12 TVASRYDEYVNVK Unmodified 1542.7678 0.7678218 3549 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.18 3.82 6 11 2 2 2 1 1 1 1 1 1 1 1 1 1 1 50.723 48.717 2;3 0.00099947 61445 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 69.864 50.469 1149200000 659180000 251180000 80294000 6658400 6417100 26277000 9205500 10225000 6755000 17000000 14683000 15694000 14708000 0 30903000 53910 3549 48408 452637;452638;452639;452640;452641;452642;452643;452644;452645;452646;452647;452648;452649;452650;452651;452652;452653 357729;357730;357731;357732;357733;357734;357735 357735 7 TVASSDDDSPPAR Unmodified 1316.5844 0.58443771 165 O00512 BCL9 B-cell CLL/lymphoma 9 protein yes yes 0 0 0 By MS/MS By matching By matching By MS/MS 10 0 4 1 1 1 1 14.654 14.881 2 3.0676E-05 13656 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.83 86.367 15160000 0 0 0 0 0 0 1549400 0 0 0 0 0 2266300 3556600 7788000 53911 165 48409 452654;452655;452656;452657 357736;357737 357737 2 TVASTAMNSQSSR Oxidation (M) 1354.6147 0.61469198 632 O95239;Q2VIQ3 KIF4A;KIF4B Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 1 1 2 7.7855 7.9125 2 3.7007E-08 4823 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 101.95 97.342 56128000 0 0 0 1107400 1555300 2013200 3223200 3199700 4386000 5511900 15220000 6267600 4746200 4723900 4173200 53912 632 48410 452658;452659;452660;452661;452662;452663;452664;452665;452666;452667;452668;452669;452670 357738;357739;357740;357741;357742;357743;357744;357745;357746;357747;357748 357745 775 9 TVASTAMNSQSSR Unmodified 1338.6198 0.61977736 632 O95239;Q2VIQ3 KIF4A;KIF4B Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B yes no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.159 18.347 2 0.016646 18799 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 50.292 24.25 107960000 0 0 0 4749600 8276000 7400500 8447000 9008700 4989800 14824000 10541000 7937200 6454300 8514300 16822000 53913 632 48410 452671;452672;452673;452674;452675;452676;452677;452678;452679;452680;452681;452682 357749;357750 357750 2 TVATASQEIIIASTK Unmodified 1531.8457 0.84573777 2216 Q12968 NFATC3 Nuclear factor of activated T-cells, cytoplasmic 3 yes yes 0 0 0 By MS/MS 2 0 1 1 75.242 70.302 2 3.1668E-38 88059 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.42 110.41 44577000 0 44577000 0 0 0 0 0 0 0 0 0 0 0 0 0 53914 2216 48411 452683 357751 357751 1 TVATFILQK Unmodified 1019.6015 0.60153174 3635 Q92600 RQCD1 Cell differentiation protein RCD1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 69.677 69.125 2 0.005209 78856 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 80.229 27.826 294320000 69995000 0 0 12542000 15849000 17691000 16350000 18722000 11226000 17410000 19635000 24058000 14295000 19042000 37509000 53915 3635 48412 452684;452685;452686;452687;452688;452689;452690;452691;452692;452693;452694;452695;452696 357752;357753;357754;357755;357756;357757;357758;357759;357760;357761;357762;357763 357762 12 TVATLSILGTR Unmodified 1130.6659 0.66592292 4387 Q9H3U1 UNC45A Protein unc-45 homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.507 75.568 2 0.0059495 87175 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 57.785 21.39 90270000 0 0 0 4568400 4404000 7701900 5730400 5395100 6708800 9523000 9609200 9482500 6237700 7168400 13740000 53916 4387 48413 452697;452698;452699;452700;452701;452702;452703;452704;452705;452706;452707;452708 357764;357765;357766;357767;357768;357769;357770;357771;357772 357764 7 TVATPLNQVANPNSAIFGGAR Unmodified 2097.0967 0.096700937 2490 Q15056 EIF4H Eukaryotic translation initiation factor 4H yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 82.032 82.213 2 3.1714E-53 94846 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 119.32 105.64 25526000 0 0 0 0 0 0 1681000 1639600 1255300 0 3779200 7325100 0 0 9845800 53917 2490 48414 452709;452710;452711;452712;452713;452714;452715 357773;357774;357775;357776;357777 357775 5 TVATPLNQVANPNSAIFGGARPR Unmodified 2350.2506 0.25057582 2490 Q15056 EIF4H Eukaryotic translation initiation factor 4H yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 78.537 78.644 3 2.736E-34 90435 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 103.26 91.135 323600000 0 0 0 0 5666100 17915000 9756100 19291000 12583000 20989000 24952000 48792000 0 28082000 135570000 53918 2490 48415 452716;452717;452718;452719;452720;452721;452722;452723;452724;452725 357778;357779;357780;357781;357782;357783;357784;357785;357786;357787;357788 357781 11 TVATPLNQVANPNSAIFGGARPREEVVQK Unmodified 3062.6261 0.62613037 2490 Q15056 EIF4H Eukaryotic translation initiation factor 4H yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 2 2 2 2 76.388 76.564 3;4 6.456E-101 87868 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 126.68 108.07 355780000 0 0 0 0 0 11258000 0 15900000 9860900 17157000 30344000 44056000 0 15679000 211520000 53919 2490 48416 452726;452727;452728;452729;452730;452731;452732;452733;452734;452735;452736;452737 357789;357790;357791;357792;357793;357794;357795;357796;357797 357791 8 TVAVASGAASTPISISTGAPTVR Unmodified 2113.1379 0.13789705 2935 Q6P4R8 NFRKB Nuclear factor related to kappa-B-binding protein yes yes 0 0 0 By MS/MS 10 0 1 1 75.603 75.758 2 0.025513 87324 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 37.177 31.693 4333000 0 0 0 0 0 0 4333000 0 0 0 0 0 0 0 0 53920 2935 48417 452738 357798 357798 1 TVAVIGGISR Unmodified 971.57638 0.57637963 4168 Q9BUQ8 DDX23 Probable ATP-dependent RNA helicase DDX23 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 51.907 52.219 2 0.023694 59132 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 45.368 8.2088 85576000 0 0 0 0 0 7167900 7516100 8631400 0 11882000 10547000 13369000 0 11735000 14728000 53921 4168 48418 452739;452740;452741;452742;452743;452744;452745;452746;452747;452748 357799;357800;357801;357802;357803;357804 357799 5 TVAVITSDGR Unmodified 1017.5455 0.54547343 688 O95777 LSM8 U6 snRNA-associated Sm-like protein LSm8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 31.98 32.217 2 0.0084468 35327 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 60.019 14.339 39941000 0 0 0 2013300 0 0 1532000 3726900 0 0 8365500 0 2345500 3652300 18306000 53922 688 48419 452749;452750;452751;452752;452753;452754;452755 357805;357806;357807;357808;357809;357810;357811;357812 357808 8 TVAVWDSETGER Unmodified 1348.6259 0.62590859 3798 Q96DI7 SNRNP40 U5 small nuclear ribonucleoprotein 40 kDa protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 49.039 49.389 2 0.00027515 55736 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 83 56.486 37447000 0 0 0 0 0 0 0 9322400 0 12254000 0 0 0 0 15870000 53923 3798 48420 452756;452757;452758;452759 357813;357814;357815;357816;357817 357813 5 TVAVWDSETGERVK Unmodified 1575.7893 0.78928553 3798 Q96DI7 SNRNP40 U5 small nuclear ribonucleoprotein 40 kDa protein yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 54.675 48.624 3 0.00039526 66652 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.776 59.76 71367000 17838000 0 53529000 0 0 0 0 0 0 0 0 0 0 0 0 53924 3798 48421 452760;452761 357818;357819 357818 2 TVAYTEQK Unmodified 938.47091 0.4709115 1270 P30101 PDIA3 Protein disulfide-isomerase A3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12.784 12.208 2 0.012115 16108 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.41 59.76 1338700000 279380000 905380000 13047000 5076600 4063600 3997700 5101600 4766900 3240800 8447200 19019000 24720000 0 9719900 52791000 53925 1270 48422 452762;452763;452764;452765;452766;452767;452768;452769;452770;452771;452772;452773;452774;452775 357820;357821;357822;357823;357824;357825 357823 5 TVCDAAEK Unmodified 892.39603 0.396032 421 O60664 PLIN3 Perilipin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 6.6834 6.0546 2 0.017697 4397 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 65.246 11.537 111220000 20363000 35043000 0 4418500 4910400 12430000 9076200 6091400 11195000 1143100 0 0 6551800 0 0 53926 421 48423 452776;452777;452778;452779;452780;452781;452782;452783;452784;452785 357826;357827;357828 357826 3 TVCIYGHLDVQPAALEDGWDSEPFTLVERDGK Unmodified 3616.7144 0.71441261 3910 Q96KP4 CNDP2 Cytosolic non-specific dipeptidase yes yes 0 0 1 By MS/MS 2 0 1 1 96.936 88.806 4 1.4904E-44 114714 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.185 89.741 38432000 38432000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53927 3910 48424 452786 357829 357829 1 TVCVEMGDVESAF Unmodified 1442.6058 0.60576678 1561 P49189 ALDH9A1 4-trimethylaminobutyraldehyde dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS 1.5 0.5 1 1 1 1 104.83 110.1 2 5.5027E-13 90442 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 120.15 109 128230000 128230000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53928 1561 48425 452787;452788 357830;357831 357831 2 TVCVEMGDVESAF Oxidation (M) 1458.6007 0.6006814 1561 P49189 ALDH9A1 4-trimethylaminobutyraldehyde dehydrogenase yes yes 0 1 0 By MS/MS By MS/MS 1 0 2 1 1 103.73 106.81 2 2.0049E-08 89125 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 110.41 94.21 93485000 37777000 55708000 0 0 0 0 0 0 0 0 0 0 0 0 0 53929 1561 48425 452789;452790 357832;357833 357832 2478 2 TVDEACLLLAEYNGR Unmodified 1722.8247 0.82468476 4569 Q9NQG5 RPRD1B Regulation of nuclear pre-mRNA domain-containing protein 1B yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 82.49 82.622 3 0.00086949 95330 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.77 32.714 35738000 0 0 0 0 0 9406400 0 0 2959800 0 0 2923100 0 6440600 14008000 53930 4569 48426 452791;452792;452793;452794;452795 357834;357835 357834 2 TVDEDPDER Unmodified 1074.4465 0.44654725 1055 P17544 ATF7 Cyclic AMP-dependent transcription factor ATF-7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 10.916 11.055 2 0.013807 10255 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 59.245 38.69 40290000 0 0 0 3752600 1720200 3370500 4183400 2068700 1816400 3419500 2953100 4482800 3049000 3218900 6254400 53931 1055 48427 452796;452797;452798;452799;452800;452801;452802;452803;452804;452805;452806;452807 357836;357837;357838 357836 3 TVDEDPDERR Unmodified 1230.5477 0.54765827 1055 P17544 ATF7 Cyclic AMP-dependent transcription factor ATF-7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 8.4198 8.5455 3 0.026499 6081 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.229 25.583 61539000 0 0 0 5484800 3442600 3510600 4407100 2154500 0 5057100 11094000 6698800 8269300 3901600 7519200 53932 1055 48428 452808;452809;452810;452811;452812;452813;452814;452815;452816;452817;452818 357839 357839 1 TVDEDPDERRQR Unmodified 1514.7073 0.70734681 1055 P17544 ATF7 Cyclic AMP-dependent transcription factor ATF-7 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.04 7.1636 3 1.2325E-13 4632 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 134.2 131.63 166170000 0 0 0 8241200 7373800 10446000 9276900 9485100 14640000 18357000 23077000 13828000 14224000 15611000 21607000 53933 1055 48429 452819;452820;452821;452822;452823;452824;452825;452826;452827;452828;452829;452830 357840;357841;357842;357843;357844;357845;357846;357847;357848;357849 357843 10 TVDFTQDSNYLLTGGQDK Unmodified 2000.9327 0.93271488 5167 Q9Y3F4 STRAP Serine-threonine kinase receptor-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 4 2 12 2 4 1 1 1 1 1 1 1 1 1 1 1 1 79.282 77.875 2 4.3935E-84 90914 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 226.59 213.19 2054100000 52995000 1741400000 0 7140300 9234600 11778000 9961500 11613000 8119700 24254000 34887000 32507000 12222000 23045000 74916000 53934 5167 48430 452831;452832;452833;452834;452835;452836;452837;452838;452839;452840;452841;452842;452843;452844;452845;452846;452847;452848 357850;357851;357852;357853;357854;357855;357856;357857;357858;357859;357860;357861;357862;357863;357864;357865;357866;357867 357864 18 TVDGPSGK Unmodified 759.37628 0.37628284 782 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.748 2 4 4 4 5 1 24.594 22.612 2 0.011707 1953 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 108.46 84.274 3936000000 1671300000 2264500000 210340 0 0 0 0 0 0 0 0 0 0 0 0 53935 782 48431 452849;452850;452851;452852;452853;452854;452855;452856;452857;452858 357868;357869;357870;357871;357872;357873;357874;357875;357876;357877;357878;357879;357880;357881;357882;357883;357884;357885;357886;357887;357888;357889;357890;357891;357892;357893;357894;357895;357896;357897;357898;357899;357900;357901;357902;357903;357904;357905;357906;357907;357908;357909;357910;357911 357903 44 TVDGPSGKLWR Unmodified 1214.6408 0.6407708 782 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 41.767 42.276 3 0.034799 46228 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.592 31.053 14587000 0 0 0 0 0 0 0 0 0 0 0 0 0 2396200 12191000 53936 782 48432 452859;452860 357912 357912 0 TVDIDDAQILPR Unmodified 1354.7092 0.70924429 2880 Q6GYQ0 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 yes yes 0 0 0 By MS/MS 10 0 1 1 74.568 74.822 2 0.0037911 86411 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 59.426 47.212 6824100 0 0 0 0 0 0 0 0 0 0 0 6824100 0 0 0 53937 2880 48433 452861 357913 357913 1 TVDLKPDWGK Unmodified 1157.6081 0.60807369 1313 P31948 STIP1 Stress-induced-phosphoprotein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.56 3.9 6 1 9 2 3 2 1 1 1 1 1 1 1 1 1 54.022 51.258 2;3 3.4449E-05 64338 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 144.77 118.83 1652900000 199200000 760910000 315180000 0 12798000 0 0 14010000 0 0 66659000 44360000 17208000 58616000 163960000 53938 1313 48434 452862;452863;452864;452865;452866;452867;452868;452869;452870;452871;452872;452873;452874;452875;452876;452877 357914;357915;357916;357917;357918;357919;357920;357921;357922;357923;357924;357925;357926;357927;357928;357929;357930;357931;357932;357933;357934;357935 357929 20 TVDLQDAEEAVELVQYAYFK Unmodified 2330.1318 0.13180862 1183 P25205 MCM3 DNA replication licensing factor MCM3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.4 0.49 6 4 4 5 1 100.57 95.899 2;3 5.8606E-107 119135 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 230.36 214.97 583720000 312560000 263920000 7238300 0 0 0 0 0 0 0 0 0 0 0 0 53939 1183 48435 452878;452879;452880;452881;452882;452883;452884;452885;452886;452887 357936;357937;357938;357939;357940;357941;357942;357943;357944;357945;357946;357947 357937 11 TVDMESTEVFTK Oxidation (M) 1401.6334 0.63336174 60 CON__P02663 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 2 1 1 43.538 43.603 2 0.00015121 49215 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 83.862 78.897 + 48545000 0 0 0 5937200 7353700 0 5015700 4455000 0 4112300 18020000 0 0 3650600 0 53940 60 48436 452888;452889;452890;452891;452892;452893;452894;452895;452896;452897 357948;357949;357950;357951;357952;357953;357954 357954 68 7 TVDNFVALATGEK Unmodified 1363.6983 0.69834526 1153 P23284 PPIB Peptidyl-prolyl cis-trans isomerase B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.34 3.92 1 14 2 12 4 10 3 1 1 1 1 1 1 1 1 1 1 1 1 80.897 79.214 2;3 3.6033E-25 90354 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 188.96 153.67 14835000000 341900000 12968000000 257750000 40716000 61244000 48964000 55178000 66433000 45529000 83802000 146850000 154800000 54093000 110230000 399800000 53941 1153 48437 452898;452899;452900;452901;452902;452903;452904;452905;452906;452907;452908;452909;452910;452911;452912;452913;452914;452915;452916;452917;452918;452919;452920;452921;452922;452923;452924;452925;452926 357955;357956;357957;357958;357959;357960;357961;357962;357963;357964;357965;357966;357967;357968;357969;357970;357971;357972;357973;357974;357975;357976;357977;357978;357979;357980;357981;357982;357983;357984;357985;357986;357987 357983 31 TVDPETQAR Unmodified 1015.4934 0.49343786 472;3250 Q8IWZ3;O75179 ANKHD1;ANKRD17 Ankyrin repeat and KH domain-containing protein 1;Ankyrin repeat domain-containing protein 17 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.118 14.28 2 0.0033419 13781 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 90.37 68.41 289450000 0 0 0 12556000 14424000 19987000 16536000 16071000 11635000 33753000 28355000 24663000 33348000 31646000 46476000 53942 3250;472 48438 452927;452928;452929;452930;452931;452932;452933;452934;452935;452936;452937;452938 357988;357989;357990;357991;357992;357993;357994;357995;357996;357997;357998 357995 9 TVDSCFQDLK Unmodified 1211.5492 0.54923818 4559 Q9NQ48 LZTFL1 Leucine zipper transcription factor-like protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 54.838 49.033 2 0.006271 63300 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.692 41.525 102700000 0 102700000 0 0 0 0 0 0 0 0 0 0 0 0 0 53943 4559 48439 452939 357999 357999 1 TVDSQGPTPVCTPTFLER Unmodified 2003.9622 0.96224087 4250 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.679 76.737 2 4.3112E-05 88968 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 72.089 64.178 61071000 0 0 0 3585200 4427900 5298700 5493300 3963100 3892900 6544000 5519700 6988200 4786500 4384400 6186700 53944 4250 48440 452940;452941;452942;452943;452944;452945;452946;452947;452948;452949;452950;452951 358000;358001 358000 2 TVDTDSHAEQGPAQQPQAQVEDADAFEHIK Unmodified 3261.481 0.48104186 4641 Q9NU22 MDN1 Midasin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 63.246 63.517 4 1.8075E-14 73101 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 45.791 43.384 109110000 0 0 0 0 0 0 10004000 0 7321600 17460000 17263000 15468000 11120000 12997000 17480000 53945 4641 48441 452952;452953;452954;452955;452956;452957;452958;452959 358002;358003;358004;358005;358006;358007;358008;358009;358010;358011;358012;358013;358014;358015;358016 358014 15 TVDVAAEK Unmodified 831.4338 0.43379771 2004 P82979 SARNP SAP domain-containing ribonucleoprotein yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By matching 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 14.729 14.425 2 0.021563 17347 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.498 21.783 563240000 229190 137350000 79628 21249000 20161000 27683000 32603000 20601000 26925000 30456000 44835000 54281000 30037000 39861000 76883000 53946 2004 48442 452960;452961;452962;452963;452964;452965;452966;452967;452968;452969;452970;452971;452972;452973;452974;452975 358017;358018 358018 1 TVDVPASLPTPPHNNQEELR Unmodified 2213.1077 0.10765955 3436 Q8NEZ4 KMT2C Histone-lysine N-methyltransferase 2C yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 68.817 68.983 3 0.0076777 79219 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 29.892 24.635 20043000 0 0 0 0 0 2686300 0 0 1607000 0 0 8086200 4047000 3616100 0 53947 3436 48443 452976;452977;452978;452979;452980 358019;358020 358019 2 TVDVSDMGPSHIINIK Unmodified 1724.8767 0.87672033 810 P05423 POLR3D DNA-directed RNA polymerase III subunit RPC4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 5.2 3.92 3 2 1 1 1 1 1 78.358 75.353 3 0.00011614 92411 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 93.478 73.372 104470000 11797000 60958000 13799000 0 0 0 0 0 0 0 0 0 0 4467500 13451000 53948 810 48444 452981;452982;452983;452984;452985 358021;358022;358023;358024 358024 3 TVDVSDMGPSHIINIK Oxidation (M) 1740.8716 0.87163495 810 P05423 POLR3D DNA-directed RNA polymerase III subunit RPC4 yes yes 0 1 0 By matching By MS/MS 2 0 2 1 1 70.295 64.314 3 0.00044439 79442 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 61.444 49.83 15647000 4001300 0 11645000 0 0 0 0 0 0 0 0 0 0 0 0 53949 810 48444 452986;452987 358025 358025 969 1 TVEAEAAHGTVTR Unmodified 1340.6684 0.66844211 552 O75874 IDH1 Isocitrate dehydrogenase [NADP] cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 19.576 19.018 2;3 0.00063793 19862 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 74.944 53.481 171610000 0 26759000 6180300 8888500 2360400 3489700 3141700 3265200 1818000 4717500 17168000 20667000 5113300 9556100 58487000 53950 552 48445 452988;452989;452990;452991;452992;452993;452994;452995;452996;452997;452998;452999;453000;453001;453002 358026;358027;358028;358029;358030;358031 358026 5 TVEAPLVTEEK Unmodified 1214.6394 0.63943339 3999 Q96T58 SPEN Msx2-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 47.485 47.586 2 0.001123 53560 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 74.92 46.702 26527000 0 0 0 0 3952800 0 0 0 4475300 0 6681200 0 11417000 0 0 53951 3999 48446 453003;453004;453005;453006 358032;358033;358034;358035 358033 4 TVEDADMELTSRDEGERK Unmodified 2079.9379 0.93787661 4945 Q9UJX4 ANAPC5 Anaphase-promoting complex subunit 5 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 2 1 36.857 36.328 3;4 0.0024676 40205 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 41.871 32.928 138010000 10911000 0 4913600 5116700 0 11497000 4916100 7134100 6567400 10587000 7471800 14754000 12542000 19846000 21753000 53952 4945 48447 453007;453008;453009;453010;453011;453012;453013;453014;453015;453016;453017;453018;453019;453020 358036;358037;358038;358039;358040;358041 358040 5 TVEDLDGLIQQIYRDQDLTQEIAMEHFVK Unmodified 3446.7028 0.70278529 5011 Q9ULX6 AKAP8L A-kinase anchor protein 8-like yes yes 0 0 1 By MS/MS 2 0 1 1 100.81 92.679 4 0.00035023 119362 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 34.885 29.62 6968800 6968800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53953 5011 48448 453021 358042 358042 1 TVEEAENIAVTSGVVR Unmodified 1672.8632 0.86317875 574 O76070 SNCG Gamma-synuclein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 25 2 2 2 2 2 2 2 2 3 2 2 2 67.887 67.967 2;3 9.4812E-85 77921 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 190.35 171.22 640280000 0 0 0 31022000 51279000 45061000 34801000 30767000 33281000 54358000 76888000 77749000 37469000 60365000 107240000 53954 574 48449 453022;453023;453024;453025;453026;453027;453028;453029;453030;453031;453032;453033;453034;453035;453036;453037;453038;453039;453040;453041;453042;453043;453044;453045;453046 358043;358044;358045;358046;358047;358048;358049;358050;358051;358052;358053;358054;358055;358056;358057;358058;358059;358060;358061;358062;358063;358064;358065;358066;358067;358068;358069;358070;358071 358066 28 TVEEAENIAVTSGVVRK Unmodified 1800.9581 0.95814177 574 O76070 SNCG Gamma-synuclein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.13 3.76 11 3 24 3 7 4 2 2 2 2 2 2 2 2 2 2 2 2 60.133 58.809 2;3 1.3799E-159 66673 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 271.01 228.29 4923800000 251130000 1382300000 367740000 117980000 154330000 153920000 201420000 156690000 201880000 166450000 332030000 305930000 191520000 249790000 690680000 53955 574 48450 453047;453048;453049;453050;453051;453052;453053;453054;453055;453056;453057;453058;453059;453060;453061;453062;453063;453064;453065;453066;453067;453068;453069;453070;453071;453072;453073;453074;453075;453076;453077;453078;453079;453080;453081;453082;453083;453084 358072;358073;358074;358075;358076;358077;358078;358079;358080;358081;358082;358083;358084;358085;358086;358087;358088;358089;358090;358091;358092;358093;358094;358095;358096;358097;358098;358099;358100;358101;358102;358103;358104;358105;358106;358107;358108;358109;358110;358111;358112;358113;358114;358115;358116;358117;358118;358119;358120;358121;358122;358123;358124 358099 43 TVEEIEACMAGCDK Unmodified 1611.6579 0.6578787 972 P12955 PEPD Xaa-Pro dipeptidase yes yes 0 0 0 By MS/MS 2 0 1 1 62.586 56.693 2 0.0011355 72826 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.92 74.274 14820000 0 14820000 0 0 0 0 0 0 0 0 0 0 0 0 0 53956 972 48451 453085 358125 358125 1 TVEELFVNCK Unmodified 1237.6013 0.60127375 3320 Q8N3C0 ASCC3 Activating signal cointegrator 1 complex subunit 3 yes yes 0 0 0 By MS/MS 2 0 1 1 70.553 64.736 2 0.015079 82467 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.743 34.04 19050000 0 19050000 0 0 0 0 0 0 0 0 0 0 0 0 0 53957 3320 48452 453086 358126 358126 1 TVEELLETGLIQVATK Unmodified 1742.9666 0.96658119 3151 Q86UP2 KTN1 Kinectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 98.153 93.496 3 1.4727E-32 116455 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.64 95.406 26549000 10311000 14933000 1304800 0 0 0 0 0 0 0 0 0 0 0 0 53958 3151 48453 453087;453088;453089;453090 358127;358128;358129;358130 358127 4 TVEELRTTVDSVEGNASK Unmodified 1933.9593 0.95926398 2676 Q3V6T2 CCDC88A Girdin yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 62.779 57.94 3 5.947E-06 71667 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 89.982 74.59 38724000 0 27497000 11227000 0 0 0 0 0 0 0 0 0 0 0 0 53959 2676 48454 453091;453092 358131;358132;358133 358132 3 TVEENILK Unmodified 944.51786 0.51786169 3006 Q6ZRS2 SRCAP Helicase SRCAP yes yes 0 0 0 By MS/MS 10 0 1 1 24.111 24.597 2 0.022875 25688 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 60.799 0.32129 3582100 0 0 0 0 0 0 0 0 0 0 3582100 0 0 0 0 53960 3006 48455 453093 358134 358134 1 TVEEVTVERNEK Unmodified 1431.7205 0.72053726 2136 Q07157 TJP1 Tight junction protein ZO-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 1 1 1 1 1 1 1 1 1 1 1 1 1 23.452 23.035 3 0.00026092 24441 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 80.871 51.063 120870000 0 5893200 6673100 9485200 9617600 10423000 7614500 6454000 6739500 13687000 14547000 0 7064700 9544800 13123000 53961 2136 48456 453094;453095;453096;453097;453098;453099;453100;453101;453102;453103;453104;453105;453106 358135;358136;358137;358138;358139;358140;358141;358142;358143;358144;358145;358146;358147;358148;358149;358150;358151 358150 16 TVEFLQEYIVNR Unmodified 1509.7827 0.78274359 372 O43823 AKAP8 A-kinase anchor protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 84.378 84.523 2 2.6554E-05 97923 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 110.14 56.453 22644000 0 0 0 0 0 0 0 0 0 5535500 3579200 3300400 0 2315000 7914100 53962 372 48457 453107;453108;453109;453110;453111 358152;358153;358154;358155 358152 4 TVEGAGSIAAATGFVK Unmodified 1477.7777 0.77765821 1393 P37840 SNCA Alpha-synuclein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.59 2.99 3 1 18 1 2 1 2 1 1 2 1 1 2 2 2 1 1 2 75.157 74.354 2;3 1.6582E-23 86019 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 121.04 85.499 856370000 16466000 389790000 14080000 23638000 25678000 22124000 32513000 26362000 24520000 39980000 42732000 64159000 33980000 28533000 71816000 53963 1393 48458 453112;453113;453114;453115;453116;453117;453118;453119;453120;453121;453122;453123;453124;453125;453126;453127;453128;453129;453130;453131;453132;453133 358156;358157;358158;358159;358160;358161;358162;358163;358164;358165;358166;358167;358168;358169;358170;358171;358172 358165 14 TVEGRELQSVKPQEAPK Unmodified 1895.0112 0.011239973 3686 Q92917 GPKOW G patch domain and KOW motifs-containing protein yes yes 0 0 2 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 40.459 35.367 3;4 4.4866E-18 44328 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 116.87 107.45 139870000 24710000 19094000 96066000 0 0 0 0 0 0 0 0 0 0 0 0 53964 3686 48459 453134;453135;453136 358173;358174;358175;358176 358176 4 TVEHGFPNQPSALAFDPELR Unmodified 2224.0913 0.091281208 2517 Q15334 LLGL1 Lethal(2) giant larvae protein homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 80.658 80.775 3 9.0048E-06 93348 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 61.942 52.884 35742000 0 0 0 0 0 5649400 0 0 4014700 7816500 0 0 2666600 0 15595000 53965 2517 48460 453137;453138;453139;453140;453141 358177;358178;358179 358177 3 TVEICPFSFDSR Unmodified 1456.6657 0.66566492 5009 Q9ULW0 TPX2 Targeting protein for Xklp2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 81.464 81.514 2 0.0009629 94310 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 72.006 50.26 63765000 0 0 0 3646600 3380800 5722800 3332500 3565200 0 7977900 5449200 13442000 3731500 4283700 9233300 53966 5009 48461 453142;453143;453144;453145;453146;453147;453148;453149;453150;453151;453152 358180;358181;358182;358183;358184;358185;358186;358187;358188;358189;358190;358191;358192 358180 11 TVEINGEK Unmodified 888.45526 0.45526144 2512 Q15286;Q15771 RAB35;RAB30 Ras-related protein Rab-35;Ras-related protein Rab-30 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 15.424 15.558 2 0.034963 14130 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 52.786 22.117 61447000 0 0 0 2775400 3446900 4023100 6172400 0 3411900 0 0 9679100 8326200 10616000 12996000 53967 2512 48462 453153;453154;453155;453156;453157;453158;453159;453160;453161 358193;358194 358193 2 TVEINNTDAEGR Unmodified 1317.6161 0.61607219 3417 Q8NDH3 NPEPL1 Probable aminopeptidase NPEPL1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 25.161 25.724 2 1.2342E-05 26319 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.79 80.307 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53968 3417 48463 453162;453163;453164 358195;358196;358197 358195 3 TVEINNTDAEGRLVLADGVSYACK Unmodified 2594.2646 0.26463048 3417 Q8NDH3 NPEPL1 Probable aminopeptidase NPEPL1 yes yes 0 0 1 By MS/MS 2 0 1 1 80.022 77.449 3 0.0094601 94051 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 27.408 19.51 1744200 0 0 1744200 0 0 0 0 0 0 0 0 0 0 0 0 53969 3417 48464 453165 358198 358198 1 TVEIVHIDIADRSQVEPADYK Unmodified 2397.2176 0.21760393 1554 P48739 PITPNB Phosphatidylinositol transfer protein beta isoform yes yes 0 0 1 By MS/MS By MS/MS 2.25 0.433 3 1 3 1 79.929 74.257 3;4 0.00011964 95647 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.808 36.348 196760000 190600000 0 6164200 0 0 0 0 0 0 0 0 0 0 0 0 53970 1554 48465 453166;453167;453168;453169 358199;358200;358201;358202 358200 3 TVELPLNK Unmodified 912.52803 0.52803245 4189 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 52.92 52.3 2 0.013654 59426 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 71.852 34.759 78097000 0 54234000 0 0 0 3810700 3276000 0 3505700 0 0 5018900 4678600 3573400 0 53971 4189 48466 453170;453171;453172;453173;453174;453175;453176 358203;358204;358205 358203 3 TVELQGK Unmodified 773.42832 0.42831841 1830 P61026 RAB10 Ras-related protein Rab-10 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 13.943 13.552 2 0.030762 12642 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 74.439 14.798 412740000 0 248370000 0 11844000 9177100 9270600 10561000 17058000 0 17328000 21019000 16786000 15539000 10515000 25271000 53972 1830 48467 453177;453178;453179;453180;453181;453182;453183;453184;453185;453186;453187;453188;453189 358206;358207;358208;358209 358207 4 TVELSIPADPANLDSEAK Unmodified 1868.9367 0.93673763 2231 Q13085 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 80.805 80.497 2 2.0492E-37 92849 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 127.71 108.9 243040000 0 20674000 0 6286700 10825000 23515000 11565000 14447000 10522000 24358000 22615000 28694000 12904000 15098000 41532000 53973 2231 48468 453190;453191;453192;453193;453194;453195;453196;453197;453198;453199;453200;453201;453202 358210;358211;358212;358213;358214;358215;358216;358217;358218;358219;358220;358221;358222;358223 358214 14 TVENFVALATGEK Unmodified 1377.714 0.71399532 1484 P45877 PPIC Peptidyl-prolyl cis-trans isomerase C yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 84.068 80.572 2 1.7645E-21 100309 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145.28 108.89 207320000 0 197460000 9856500 0 0 0 0 0 0 0 0 0 0 0 0 53974 1484 48469 453203;453204;453205 358224;358225;358226 358224 3 TVENLLQRDEK Unmodified 1343.7045 0.70449327 5350 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 2 1 2 1 1 1 1 31.272 31.343 3 0.015858 34569 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 30.139 7.8104 + 86455000 0 0 0 12939000 6668600 0 25269000 0 0 9139200 11723000 0 9586600 0 11131000 53975 5350 48470 453206;453207;453208;453209;453210;453211;453212;453213;453214 358227;358228 358228 2 TVEPATVSEEAK Unmodified 1259.6245 0.62451161 3999 Q96T58 SPEN Msx2-interacting protein yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 29.695 29.875 2 0.0095731 32221 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 47.559 19.546 36581000 0 0 0 2574000 1916600 2442600 0 3328500 3254500 2750600 0 5074900 6869500 3838300 4531100 53976 3999 48471 453215;453216;453217;453218;453219;453220;453221;453222;453223;453224 358229;358230;358231;358232 358230 4 TVEPLEYYRR Unmodified 1324.6776 0.67755023 3749 Q96B26 EXOSC8 Exosome complex component RRP43 yes yes 0 0 1 By MS/MS 10 0 1 1 50.636 50.852 3 0.043082 56565 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 40.496 25.295 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53977 3749 48472 453225 358233 358233 1 TVEPPISQVGNVDTASELEK Unmodified 2112.0586 0.058643676 621 O95104 SCAF4 Splicing factor, arginine/serine-rich 15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.58 1.79 1 18 1 2 2 1 2 2 2 1 1 1 2 1 1 75.539 75.312 2;3 6.3492E-87 86845 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 206.06 189.92 662670000 0 45749000 0 37068000 61290000 30788000 64932000 57695000 55613000 43857000 44413000 85297000 59644000 44003000 32320000 53978 621 48473 453226;453227;453228;453229;453230;453231;453232;453233;453234;453235;453236;453237;453238;453239;453240;453241;453242;453243;453244 358234;358235;358236;358237;358238;358239;358240;358241;358242;358243;358244;358245;358246;358247;358248;358249;358250 358243 13 TVEQNVLQQSAAQK Unmodified 1542.8002 0.80018457 4905 Q9UHP3 USP25 Ubiquitin carboxyl-terminal hydrolase 25 yes yes 0 0 0 By MS/MS 2 0 1 1 46.482 41.034 2 0.0080253 53170 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 57.885 28.928 27886000 0 27886000 0 0 0 0 0 0 0 0 0 0 0 0 0 53979 4905 48474 453245 358251 358251 1 TVEQTATTTNK Unmodified 1192.5935 0.59354583 866 P08579 SNRPB2 U2 small nuclear ribonucleoprotein B'' yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.88 3.69 2 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 20.867 20.904 2 4.3017E-10 92741 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 180.27 118.31 1215300000 141040000 92924000 0 42899000 38318000 31825000 39212000 33202000 38106000 67853000 176570000 151500000 100610000 97751000 163440000 53980 866 48475 453246;453247;453248;453249;453250;453251;453252;453253;453254;453255;453256;453257;453258;453259;453260;453261 358252;358253;358254;358255;358256;358257;358258;358259;358260;358261;358262;358263;358264;358265;358266;358267;358268;358269 358259 18 TVERDFEREYGK Unmodified 1527.7318 0.73177065 4581 Q9NQY0 BIN3 Bridging integrator 3 yes yes 0 0 2 By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 32.593 32.897 3 0.048514 35376 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 53.034 33.934 72344000 0 0 0 0 0 8622400 6281600 4642100 4354200 8655600 6514400 9668500 8297600 0 15307000 53981 4581 48476 453262;453263;453264;453265;453266;453267;453268;453269;453270 358270 358270 1 TVESEAASYLDQISR Unmodified 1667.8002 0.80024414 1844 P61289 PSME3 Proteasome activator complex subunit 3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 1 2 2 2 2 2 2 2 2 2 2 2 82.971 83.054 2;3 2.5656E-53 96237 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 184.03 174.37 353890000 0 0 0 1086700 7153900 15865000 7440600 16488000 10066000 52496000 35691000 41426000 5517900 43228000 117430000 53982 1844 48477 453271;453272;453273;453274;453275;453276;453277;453278;453279;453280;453281;453282;453283;453284;453285;453286;453287;453288;453289;453290;453291;453292;453293 358271;358272;358273;358274;358275;358276;358277;358278;358279;358280;358281;358282;358283 358274 8 TVESGLEVAAAPSVTPQAGTALLAPFPTQR Unmodified 2978.5713 0.57130083 1663 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 91.479 91.56 3 9.2598E-26 106236 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.701 58.541 39719000 0 0 0 1302900 0 0 0 1951100 0 13462000 6928100 3666300 0 2359700 10049000 53983 1663 48478 453294;453295;453296;453297;453298;453299;453300 358284;358285;358286;358287;358288 358285 5 TVESITDIR Unmodified 1032.5451 0.54513908 943 P11279 LAMP1 Lysosome-associated membrane glycoprotein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 48.546 48.751 2 0.0037823 54817 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 88.948 54.14 144380000 0 0 0 27857000 0 0 0 16102000 0 15705000 21874000 27173000 16145000 19523000 0 53984 943 48479 453301;453302;453303;453304;453305;453306;453307 358289;358290 358290 2 TVESITDIRADIDK Unmodified 1574.8152 0.81516593 943 P11279 LAMP1 Lysosome-associated membrane glycoprotein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 73.813 68.684 3 0.00028869 88866 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.728 59.205 127900000 18149000 99783000 9966200 0 0 0 0 0 0 0 0 0 0 0 0 53985 943 48480 453308;453309;453310;453311 358291;358292;358293;358294 358293 4 TVESLEETLK Unmodified 1147.5972 0.59723423 2454 Q14914 PTGR1 Prostaglandin reductase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.42 3.66 3 1 8 1 2 1 1 1 1 2 1 1 1 57.778 55.983 2 6.1996E-06 72098 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.36 71.08 1546400000 30963000 1397800000 16530000 10767000 8400200 0 0 9560900 0 0 28433000 9769800 0 7746300 26390000 53986 2454 48481 453312;453313;453314;453315;453316;453317;453318;453319;453320;453321;453322;453323 358295;358296;358297;358298;358299;358300;358301;358302;358303;358304;358305;358306 358296 11 TVETLQQQLSK Unmodified 1273.6878 0.68778057 3242 Q8IWJ2 GCC2 GRIP and coiled-coil domain-containing protein 2 yes yes 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 46.722 47.029 2 0.015862 51998 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 44.57 21.929 27073000 0 0 0 0 1775600 0 0 2261100 0 0 4114600 4261800 3327900 4414400 6917900 53987 3242 48482 453324;453325;453326;453327;453328;453329;453330 358307 358307 1 TVETRDGQVINETSQHHDDLE Unmodified 2422.0997 0.099673643 870 P08670 VIM Vimentin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.65 2.98 14 1 73 4 5 6 6 5 6 7 7 6 7 6 7 6 5 5 41.013 40.289 2;3;4 2.0281E-82 50599 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 147.49 143.5 4065100000 524390000 827900000 1550600000 51310000 55952000 62621000 83102000 100780000 70338000 115420000 142460000 173750000 95043000 91517000 119910000 53988 870 48483 453331;453332;453333;453334;453335;453336;453337;453338;453339;453340;453341;453342;453343;453344;453345;453346;453347;453348;453349;453350;453351;453352;453353;453354;453355;453356;453357;453358;453359;453360;453361;453362;453363;453364;453365;453366;453367;453368;453369;453370;453371;453372;453373;453374;453375;453376;453377;453378;453379;453380;453381;453382;453383;453384;453385;453386;453387;453388;453389;453390;453391;453392;453393;453394;453395;453396;453397;453398;453399;453400;453401;453402;453403;453404;453405;453406;453407;453408;453409;453410;453411;453412;453413;453414;453415;453416;453417;453418 358308;358309;358310;358311;358312;358313;358314;358315;358316;358317;358318;358319;358320;358321;358322;358323;358324;358325;358326;358327;358328;358329;358330;358331;358332;358333;358334;358335;358336;358337;358338;358339;358340;358341;358342;358343;358344;358345;358346;358347;358348;358349;358350;358351;358352;358353;358354;358355;358356;358357;358358;358359;358360;358361;358362;358363;358364;358365 358317 57 TVEVAEGEAVR Unmodified 1158.5881 0.58806652 3147 Q86UE4 MTDH Protein LYRIC yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 33.584 33.458 2 0.019022 37222 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 43.282 22.657 7090600 0 0 0 3373400 0 0 0 0 0 3717200 0 0 0 0 0 53989 3147 48484 453419;453420 358366 358366 1 TVEVAEGEAVRTPQSVTAK Unmodified 1971.0273 0.027283968 3147 Q86UE4 MTDH Protein LYRIC yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 48.04 48.101 3 0.013556 53661 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 24.279 8.5133 38993000 0 0 0 4166800 4175700 3984800 3545000 3899000 3481600 0 5672000 10068000 0 0 0 53990 3147 48485 453421;453422;453423;453424;453425;453426;453427;453428 358367;358368 358368 2 TVEVGRAYFETEK Unmodified 1527.7569 0.75692277 1014 P15170 GSPT1 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 5 2 1 2 57.587 51.58 2;3 2.2548E-21 64508 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 164.9 121.39 623960000 238610000 22892000 362450000 0 0 0 0 0 0 0 0 0 0 0 0 53991 1014 48486 453429;453430;453431;453432;453433 358369;358370;358371;358372;358373;358374;358375;358376;358377 358377 9 TVEVLEPEVTK Unmodified 1242.6707 0.67073352 3050 Q7L576;Q96F07 CYFIP1;CYFIP2 Cytoplasmic FMR1-interacting protein 1;Cytoplasmic FMR1-interacting protein 2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57.206 56.303 2 0.00034474 63346 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 88.496 56.561 334120000 8600300 197920000 0 8528600 7018100 10307000 6762000 11904000 6057100 11361000 10559000 13923000 9386800 11118000 20670000 53992 3050 48487 453434;453435;453436;453437;453438;453439;453440;453441;453442;453443;453444;453445;453446;453447 358378;358379;358380;358381;358382;358383;358384;358385;358386;358387;358388;358389;358390;358391;358392;358393 358388 14 TVEVPFK Unmodified 818.4538 0.45380487 4828 Q9P2T1 GMPR2 GMP reductase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 57.846 51.868 2 0.036349 67436 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.614 28.85 278810000 7997100 264710000 6106700 0 0 0 0 0 0 0 0 0 0 0 0 53993 4828 48488 453448;453449;453450 358394 358394 1 TVEVPTYDFVTHSR Unmodified 1649.8049 0.80493559 4480 Q9HA47 UCK1 Uridine-cytidine kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 71.37 71.571 3 0.0011637 82095 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 54.598 42.452 30848000 0 0 0 0 0 4435900 2681100 0 2528800 0 4523000 5207000 2975900 2979800 5516500 53994 4480 48489 453451;453452;453453;453454;453455;453456;453457;453458;453459 358395;358396;358397;358398;358399;358400;358401 358396 5 TVEYITK Unmodified 852.45928 0.45928418 4487 Q9HAP2 MLXIP MLX-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 26.591 26.787 2 0.044016 29122 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 66.993 27.775 27272000 0 0 0 0 2410800 4255100 2669300 0 1978200 3691100 2424600 0 4061000 3542500 2239400 53995 4487 48490 453460;453461;453462;453463;453464;453465;453466;453467;453468 358402 358402 1 TVEYLHAQGVVHR Unmodified 1507.7896 0.7895603 1672 P51812 RPS6KA3 Ribosomal protein S6 kinase alpha-3 yes yes 0 0 0 By matching By matching By MS/MS By matching 10 0 4 1 1 1 1 39.294 39.602 3 0.038439 43194 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 21.06 6.3732 27765000 0 0 0 0 0 7108000 0 0 0 6821300 0 9651400 0 4183800 0 53996 1672 48491 453469;453470;453471;453472 358403 358403 1 TVEYLHSQGVVHR Unmodified 1523.7845 0.78447492 2531 Q15418 RPS6KA1 Ribosomal protein S6 kinase alpha-1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 1 2 1 2 1 2 2 1 2 1 1 34.057 34.249 3;4 2.9101E-05 36758 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 72.496 56.74 154870000 0 0 0 5070200 5190700 12852000 7884700 22974000 5988700 8431700 14932000 22923000 16046000 12296000 20285000 53997 2531 48492 453473;453474;453475;453476;453477;453478;453479;453480;453481;453482;453483;453484;453485;453486;453487;453488;453489 358404;358405;358406;358407;358408;358409;358410;358411 358411 8 TVFAEHISDECK Unmodified 1434.6449 0.64492948 1402 P39023 RPL3 60S ribosomal protein L3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.14 3.31 5 2 22 2 3 2 2 2 1 1 2 2 2 2 2 2 2 2 41.344 40.172 2;3 8.268E-10 54161 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.02 88.836 548580000 23758000 30950000 109990000 33518000 28466000 20399000 16122000 20500000 27666000 39901000 30339000 57677000 40620000 30120000 38553000 53998 1402 48493 453490;453491;453492;453493;453494;453495;453496;453497;453498;453499;453500;453501;453502;453503;453504;453505;453506;453507;453508;453509;453510;453511;453512;453513;453514;453515;453516;453517;453518 358412;358413;358414;358415;358416;358417;358418;358419;358420;358421;358422;358423;358424;358425;358426;358427;358428;358429;358430;358431;358432;358433;358434;358435;358436;358437;358438 358415 18 TVFEALQAPACHENLVK Unmodified 1925.9669 0.96693232 613 O94973 AP2A2 AP-2 complex subunit alpha-2 yes yes 0 0 0 By MS/MS 2 0 1 1 77.448 74.757 3 0.00083113 90887 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 57.525 44.098 22692000 0 0 22692000 0 0 0 0 0 0 0 0 0 0 0 0 53999 613 48494 453519 358439 358439 1 TVFEALQAPACHENMVK Oxidation (M) 1959.9183 0.91826757 689 O95782 AP2A1 AP-2 complex subunit alpha-1 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 72.338 65.377 3 0.0035279 85564 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 41.367 37.202 80801000 53801000 27000000 0 0 0 0 0 0 0 0 0 0 0 0 0 54000 689 48495 453520;453521 358440;358441 358441 837 1 TVFEALQAPACHENMVK Unmodified 1943.9234 0.92335294 689 O95782 AP2A1 AP-2 complex subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 76.441 70.952 3 2.6471E-09 92223 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.3 89.254 135910000 119090000 0 16817000 0 0 0 0 0 0 0 0 0 0 0 0 54001 689 48495 453522;453523 358442;358443;358444 358443 2 TVFFESLER Unmodified 1126.5659 0.56587452 3 A0AVT1 UBA6 Ubiquitin-like modifier-activating enzyme 6 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 76.606 75.964 2 0.013807 87803 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 59.245 41.259 62329000 15250000 0 0 3424100 1660700 7638400 2340700 3118000 2860100 6447800 3985200 7999900 2715500 4888300 0 54002 3 48496 453524;453525;453526;453527;453528;453529;453530;453531;453532;453533;453534;453535 358445;358446;358447;358448;358449 358448 4 TVFGVEPDLTR Unmodified 1232.6401 0.6401021 3910 Q96KP4 CNDP2 Cytosolic non-specific dipeptidase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 71.746 72.02 2 0.0052839 82111 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.376 74.376 80537000 0 0 0 0 0 0 0 0 0 0 25780000 0 0 11610000 43147000 54003 3910 48497 453536;453537;453538 358450;358451 358450 2 TVFGVEPDLTREGGSIPVTLTFQEATGK Unmodified 2948.5131 0.51311725 3910 Q96KP4 CNDP2 Cytosolic non-specific dipeptidase yes yes 0 0 1 By MS/MS 2 0 1 1 97.096 92.322 3 3.1912E-07 114373 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 55.406 50.059 24025000 0 24025000 0 0 0 0 0 0 0 0 0 0 0 0 0 54004 3910 48498 453539 358452 358452 1 TVFGYLKPDNR Unmodified 1308.6826 0.68263561 5073 Q9UQR0 SCML2 Sex comb on midleg-like protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 56.484 56.827 3 0.035609 63738 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 34.75 25.462 30044000 0 0 0 0 0 6530100 4136300 0 0 0 0 9741900 0 0 9635900 54005 5073 48499 453540;453541;453542;453543 358453 358453 1 TVFLVAEDK Unmodified 1020.5492 0.54916182 16 A3KMH1 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 56.842 57.24 2 0.040237 64571 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 62.582 27.144 4297000 0 0 0 0 0 0 0 0 0 0 4297000 0 0 0 0 54006 16 48500 453544;453545 358454;358455 358455 2 TVFPGAVPVLPASPPPK Unmodified 1672.9552 0.95522864 4836 Q9UBC2 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 84.076 84.227 3 0.031243 97330 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 25.988 9.889 12303000 0 0 0 0 0 0 0 2405000 0 0 0 0 3782700 0 6114900 54007 4836 48501 453546;453547;453548 358456;358457 358456 2 TVFQFDVQR Unmodified 1138.5771 0.57710791 375 O43847 NRD1 Nardilysin yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 70.494 70.513 2 0.02741 80135 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 49.418 29.715 33619000 0 0 0 1585400 1873400 2853600 2327600 0 0 3052900 4247900 0 3486700 3775100 10416000 54008 375 48502 453549;453550;453551;453552;453553;453554;453555;453556;453557 358458;358459 358458 2 TVFQFDVQRK Unmodified 1266.6721 0.67207093 375 O43847 NRD1 Nardilysin yes yes 0 0 1 By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 57.623 57.866 3 0.0062509 65218 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 41.283 32.978 72971000 0 0 0 0 0 0 5736900 4292800 6318900 0 0 0 9775400 9360700 37487000 54009 375 48503 453558;453559;453560;453561;453562;453563;453564 358460;358461;358462 358462 2 TVFSADPNVVDLHK Unmodified 1540.7886 0.78855725 4120 Q9BRX5 GINS3 DNA replication complex GINS protein PSF3 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 72.285 67.92 3 0.00095791 86304 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.219 54.448 22666000 0 19871000 2794800 0 0 0 0 0 0 0 0 0 0 0 0 54010 4120 48504 453565;453566 358463;358464 358463 2 TVFSNGYSSPSMRPDVSSPPSSSSTATTGPPPK Unmodified 3309.546 0.5459503 775 P04150 NR3C1 Glucocorticoid receptor yes yes 0 0 1 By matching By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 64.64 64.688 3 2.5584E-08 73369 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 34.414 28.186 17230000 0 0 0 0 1338900 0 0 4240100 0 0 7103000 0 0 4547900 0 54011 775 48505 453567;453568;453569;453570 358465;358466 358466 2 TVFSPTLPAAR Unmodified 1158.6397 0.63970816 3073 Q7Z2W4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 67.086 67.194 2 0.014237 76672 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 84.615 37.533 81234000 0 0 0 3646300 0 0 8271700 6311700 12339000 11387000 14627000 16838000 0 7814100 0 54012 3073 48506 453571;453572;453573;453574;453575;453576;453577;453578 358467;358468;358469;358470 358469 3 TVFVCDEDATLELK Unmodified 1638.7811 0.78108861 1514 P46926 GNPDA1 Glucosamine-6-phosphate isomerase 1 yes yes 0 0 0 By MS/MS 2 0 1 1 81.662 73.532 2 0.0051875 96373 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.958 49.722 10264000 10264000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54013 1514 48507 453579 358471 358471 1 TVGAAQLK Unmodified 786.45995 0.45995289 5174 Q9Y3S1 WNK2 Serine/threonine-protein kinase WNK2 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 23.618 23.774 2 0.03349 25069 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 53.679 0 11296000 0 0 0 10254000 0 0 0 0 0 0 1042200 0 0 0 0 54014 5174 48508 453580;453581 358472 358472 1 TVGALQVLGTEAQSSLLK Unmodified 1814.0149 0.014928368 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 1 2 2 2 2 2 2 2 2 88.506 88.572 2;3 5.4426E-113 102416 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 243.88 226.51 342430000 0 0 0 3631000 10190000 14601000 6497600 17582000 13096000 50962000 34750000 24813000 12150000 34431000 119730000 54015 1986 48509 453582;453583;453584;453585;453586;453587;453588;453589;453590;453591;453592;453593;453594;453595;453596;453597;453598;453599;453600;453601;453602;453603;453604 358473;358474;358475;358476;358477;358478;358479;358480;358481;358482;358483;358484;358485;358486 358476 12 TVGATALPR Unmodified 884.50797 0.50796571 1641 P50990 CCT8 T-complex protein 1 subunit theta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 34.885 33.798 2 0.0030483 37232 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 91.318 54.923 3456000000 207100000 877750000 36008000 104610000 112380000 191670000 154770000 142830000 92855000 208700000 350680000 256680000 156450000 179630000 383860000 54016 1641 48510 453605;453606;453607;453608;453609;453610;453611;453612;453613;453614;453615;453616;453617;453618;453619;453620 358487;358488;358489;358490;358491;358492;358493;358494;358495;358496;358497;358498;358499;358500;358501;358502;358503;358504;358505 358499 17 TVGFGTNNSEHITYLEHNPYEK Unmodified 2549.1823 0.18228106 4010 Q99459 CDC5L Cell division cycle 5-like protein yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 70.971 67.174 3;4 2.7532E-10 89171 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.214 64.402 97640000 86998000 0 0 0 0 0 0 0 0 0 0 0 0 0 10642000 54017 4010 48511 453621;453622 358506;358507;358508 358508 3 TVGGCGALPHGASCPYSQERPGAIGLDGCYSE Unmodified 3322.4441 0.44414454 3386 Q8NB46 ANKRD52 Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C yes yes 0 0 1 By MS/MS 2 0 1 1 77.286 69.155 3 0.000977 91043 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 34.617 32.934 19246000 19246000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54018 3386 48512 453623 358509 358509 1 TVGHSVVSPQDTVQR Unmodified 1608.822 0.82198264 3673 Q92871 PMM1 Phosphomannomutase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 44.03 43.958 3 0.039266 49246 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 17.629 2.8376 151220000 0 0 0 12422000 12962000 49040000 0 0 36704000 26337000 0 0 0 13751000 0 54019 3673 48513 453624;453625;453626;453627;453628;453629 358510 358510 1 TVGNIEELAAECK Unmodified 1432.6868 0.68679429 2980 Q6UWP2 DHRS11 Dehydrogenase/reductase SDR family member 11 yes yes 0 0 0 By MS/MS 2 0 1 1 69.227 63.358 2 0.023399 80754 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.124 54.384 53001000 0 53001000 0 0 0 0 0 0 0 0 0 0 0 0 0 54020 2980 48514 453630 358511 358511 0 TVGPRLDHER Unmodified 1178.6156 0.61561868 1974 P78344 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 2 1 15.328 15.542 3 0.014658 14954 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 38.783 25.827 80250000 0 0 0 4717000 3189100 0 0 6846100 4961200 4410700 9638200 8986600 9925600 11380000 16196000 54021 1974 48515 453631;453632;453633;453634;453635;453636;453637;453638;453639;453640;453641 358512;358513;358514;358515;358516;358517 358517 5 TVGQLYK Unmodified 807.44905 0.44905385 1356;1357;1366;3090 P35579;Q7Z406;P35580;P35749 MYH9;MYH14;MYH10;MYH11 Myosin-9;Myosin-14;Myosin-10;Myosin-11 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 2 1 1 1 1 1 1 1 1 1 25.425 25.542 2 0.024701 27376 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 82.263 32.143 2421500000 0 0 0 179640000 208800000 225240000 242460000 235370000 161510000 194050000 224790000 302500000 259730000 187420000 0 54022 1356;3090;1357;1366 48516 453642;453643;453644;453645;453646;453647;453648;453649;453650;453651;453652;453653 358518;358519;358520;358521;358522;358523;358524;358525;358526;358527;358528 358518 11 TVGTALSSSGMTSIATNSVPPVSSAAPK Unmodified 2617.3269 0.32689639 3120 Q7Z739 YTHDF3 YTH domain-containing family protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 79.678 79.82 3 7.0052E-11 91989 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.675 39.723 36583000 0 0 0 0 0 2814800 0 0 3563400 6738900 6743000 0 0 0 16722000 54023 3120 48517 453654;453655;453656;453657;453658 358529 358529 1 TVGTPIASVPGSTNTGTVPGSEK Unmodified 2156.0961 0.096091815 4011 Q99460 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 2 2 2 2 1 1 2 2 2 1 1 2 63.172 63.251 2;3 1.7616E-191 72337 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 209.89 192.2 1080500000 0 0 0 63119000 96408000 92841000 32978000 14456000 11911000 165840000 193730000 277380000 15446000 21828000 94552000 54024 4011 48518 453659;453660;453661;453662;453663;453664;453665;453666;453667;453668;453669;453670;453671;453672;453673;453674;453675;453676;453677;453678 358530;358531;358532;358533;358534;358535;358536;358537;358538;358539;358540;358541;358542;358543;358544;358545 358530 16 TVGTQDTPYMVNGQEIPADTLGQFPSIK Oxidation (M) 3022.4594 0.45936712 2155 Q08378 GOLGA3 Golgin subfamily A member 3 yes yes 0 1 0 By MS/MS 2 0 1 1 90.597 85.701 3 4.1795E-11 106505 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.461 62.027 68764000 0 68764000 0 0 0 0 0 0 0 0 0 0 0 0 0 54025 2155 48519 453679 358546 358546 3466 1 TVGTQDTPYMVNGQEIPADTLGQFPSIK Unmodified 3006.4645 0.4644525 2155 Q08378 GOLGA3 Golgin subfamily A member 3 yes yes 0 0 0 By MS/MS 2 0 1 1 93.023 88.113 3 2.5148E-29 109342 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.091 80.293 83742000 0 83742000 0 0 0 0 0 0 0 0 0 0 0 0 0 54026 2155 48519 453680 358547 358547 1 TVGVEPAADGK Unmodified 1042.5295 0.52948901 1510 P46779 RPL28 60S ribosomal protein L28 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 21.063 20.869 2 2.0005E-05 21916 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 130.66 100.47 977810000 24224000 0 0 51593000 46564000 49783000 52291000 50426000 45328000 92385000 94087000 119740000 115770000 116930000 118700000 54027 1510 48520 453681;453682;453683;453684;453685;453686;453687;453688;453689;453690;453691;453692;453693 358548;358549;358550;358551;358552;358553;358554;358555;358556;358557 358557 10 TVGVNNPVFLLDEVDK Unmodified 1757.92 0.91996535 3181 Q86WA8 LONP2 Lon protease homolog 2, peroxisomal yes yes 0 0 0 By MS/MS 2 0 1 1 96.33 91.509 2 0.00058613 113399 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.047 60.514 13343000 0 13343000 0 0 0 0 0 0 0 0 0 0 0 0 0 54028 3181 48521 453694 358558 358558 1 TVGVQGDCR Unmodified 990.45528 0.45527821 1612 P49915 GMPS GMP synthase [glutamine-hydrolyzing] yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 12.11 12.198 2 0.0035244 10155 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 107.9 79.789 27139000 0 0 0 0 2047200 6191900 2767700 2494100 1674500 4077000 0 0 2722600 5164200 0 54029 1612 48522 453695;453696;453697;453698;453699;453700;453701;453702;453703 358559;358560;358561;358562;358563;358564;358565 358564 7 TVGVQGDCRSYSYVCGISSK Unmodified 2222.0096 0.0096017684 1612 P49915 GMPS GMP synthase [glutamine-hydrolyzing] yes yes 0 0 1 By MS/MS 2 0 1 1 63.991 55.712 3 0.0055837 75137 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 36.253 27.322 6798900 6798900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54030 1612 48523 453704 358566 358566 1 TVHAGEVGSAEVVK Unmodified 1381.7201 0.72014333 736 P00813 ADA Adenosine deaminase yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 2 6 1 1 1 1 1 1 2 31.204 30.494 2;3 0.0016265 31543 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.951 52.206 103330000 0 35142000 10831000 0 1932500 0 0 0 0 0 8101700 10581000 0 11349000 25395000 54031 736 48524 453705;453706;453707;453708;453709;453710;453711;453712 358567;358568;358569 358568 3 TVHSGSLMLVTVELK Oxidation (M) 1628.8807 0.88074307 128 O00203 AP3B1 AP-3 complex subunit beta-1 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 80.467 75.088 3 0.00045681 96907 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.246 48.108 32572000 26526000 0 6046200 0 0 0 0 0 0 0 0 0 0 0 0 54032 128 48525 453713;453714 358570;358571 358570 169 1 TVHSYLEK Unmodified 975.50255 0.50254598 3563 Q8WVM7 STAG1 Cohesin subunit SA-1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 22.799 18.91 2 0.0059848 23718 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 140.09 92.515 57751000 42766000 0 14985000 0 0 0 0 0 0 0 0 0 0 0 0 54033 3563 48526 453715;453716 358572;358573 358573 2 TVHVVQPVQAVPEGEAAR Unmodified 1886.001 0.0010096381 1322 P32519 ELF1 ETS-related transcription factor Elf-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 52.863 52.829 3 0.0013647 60685 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 44.1 35.053 59590000 0 0 0 6700800 5586900 17105000 8584200 4832600 3457400 6706600 0 0 6616100 0 0 54034 1322 48527 453717;453718;453719;453720;453721;453722;453723;453724 358574;358575;358576;358577;358578;358579;358580 358579 5 TVIAQHHVAPR Unmodified 1227.6836 0.68363867 3019 Q6ZVX7 NCCRP1 F-box only protein 50 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 2 1 1 1 2 1 1 1 2 1 1 1 15.21 15.379 2;3 0.0003227 14577 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 83 66.368 381900000 0 0 0 90766000 14407000 9386300 14815000 51169000 7488100 34621000 35623000 47431000 36962000 16310000 22916000 54035 3019 48528 453725;453726;453727;453728;453729;453730;453731;453732;453733;453734;453735;453736;453737;453738;453739 358581;358582;358583;358584;358585;358586;358587;358588;358589;358590;358591;358592;358593;358594;358595;358596;358597;358598 358584 16 TVIDCSISNDK Unmodified 1250.5813 0.58126659 2387 Q14186 TFDP1 Transcription factor Dp-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.327 36.508 2 0.0029449 40320 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 65.347 37.605 72576000 0 0 0 4507100 3938900 8126100 4424300 3052400 5625300 6751200 5984200 6053500 5585000 7741800 10786000 54036 2387 48529 453740;453741;453742;453743;453744;453745;453746;453747;453748;453749;453750;453751 358599;358600;358601;358602;358603;358604;358605;358606;358607;358608;358609 358605 11 TVIDYNGER Unmodified 1065.5091 0.50908792 838 P07237 P4HB Protein disulfide-isomerase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 2 1 1 1 1 1 33.073 33.255 2 0.0051115 36247 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 83.265 47.385 561820000 0 0 0 23776000 17353000 14751000 16218000 17544000 13952000 32720000 96926000 75939000 32934000 61809000 157900000 54037 838 48530 453752;453753;453754;453755;453756;453757;453758;453759;453760;453761;453762;453763;453764 358610;358611;358612;358613;358614;358615;358616;358617;358618;358619 358617 9 TVIESSPESPVTITEPYR Unmodified 2004.0052 0.0051515425 3518 Q8TEQ6 GEMIN5 Gem-associated protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.694 74.759 2 2.7082E-97 86157 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 189.5 143.59 184950000 0 0 0 5717800 8781400 16274000 10947000 12556000 9575100 19221000 22345000 24280000 13057000 15291000 26900000 54038 3518 48531 453765;453766;453767;453768;453769;453770;453771;453772;453773;453774;453775;453776 358620;358621;358622;358623;358624;358625;358626;358627;358628;358629;358630;358631;358632 358620 13 TVIESSPESPVTITEPYRTLSGHTAK Unmodified 2799.4291 0.42905327 3518 Q8TEQ6 GEMIN5 Gem-associated protein 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 2 1 2 78.014 73.596 3;4 3.3303E-66 93948 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.093 89.695 366610000 305170000 40325000 21117000 0 0 0 0 0 0 0 0 0 0 0 0 54039 3518 48532 453777;453778;453779;453780;453781 358633;358634;358635;358636;358637;358638;358639;358640 358637 8 TVIEYYSASNGEPDEDAYDMRK Oxidation (M) 2568.0962 0.096227749 1852 P61599 NAA20 N-alpha-acetyltransferase 20 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 57.678 57.926 3 2.0752E-54 65614 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 113.26 109.37 299800000 0 0 0 0 0 0 70621000 101890000 106080000 0 0 21208000 0 0 0 54040 1852 48533 453782;453783;453784;453785;453786 358641;358642;358643;358644;358645;358646;358647 358642 3005 7 TVIEYYSASNGEPDEDAYDMRK Unmodified 2552.1013 0.10131313 1852 P61599 NAA20 N-alpha-acetyltransferase 20 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 64.04 64.199 3 5.9349E-86 73387 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 151.45 141.47 158660000 0 0 0 0 0 0 22816000 99678000 36169000 0 0 0 0 0 0 54041 1852 48533 453787;453788;453789 358648;358649;358650;358651;358652;358653;358654;358655 358649 8 TVIFVATGEGK Unmodified 1120.6128 0.61282471 641 O95336 PGLS 6-phosphogluconolactonase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 56.001 56.324 2 0.0018638 62874 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.363 38.428 134440000 0 0 0 0 0 16365000 0 0 0 18731000 18504000 27331000 14347000 12776000 26382000 54042 641 48534 453790;453791;453792;453793;453794;453795;453796 358656;358657;358658;358659;358660;358661 358658 6 TVIGCSGFHGDCLTLTK Unmodified 1864.8812 0.88115378 1107 P20618 PSMB1 Proteasome subunit beta type-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 3 2 1 74.548 69.1 3 3.3492E-07 84587 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 96.163 85.787 999670000 708840000 199070000 91749000 0 0 0 0 0 0 0 0 0 0 0 0 54043 1107 48535 453797;453798;453799;453800;453801;453802 358662;358663;358664;358665 358665 3 TVIGELPPASSGSALAANVCK Unmodified 2041.0514 0.051390229 3170 Q86VP6 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.69 3.47 2 2 9 4 1 1 1 1 1 2 2 78.509 77.375 2;3 6.4427E-38 89325 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 151.99 122.69 354480000 0 270790000 0 0 0 8119700 0 0 3468900 8824400 10639000 0 6488200 14111000 32044000 54044 3170 48536 453803;453804;453805;453806;453807;453808;453809;453810;453811;453812;453813;453814;453815 358666;358667;358668;358669;358670;358671;358672;358673;358674;358675;358676 358672 9 TVIGSVLLR Unmodified 956.60187 0.6018661 128 O00203 AP3B1 AP-3 complex subunit beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.113 74.176 2 0.0050719 85223 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 84.498 40.103 193900000 0 0 0 9179700 9561200 12953000 13231000 18707000 12683000 16662000 16218000 20997000 14512000 14349000 34845000 54045 128 48537 453816;453817;453818;453819;453820;453821;453822;453823;453824;453825;453826;453827 358677;358678;358679;358680;358681;358682;358683;358684;358685;358686 358685 9 TVIIEQSWGSPK Unmodified 1343.7085 0.70851601 930 P10809 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.907 64.995 2 4.706E-34 73686 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 174.73 116.06 644360000 0 0 0 27584000 31953000 51231000 39058000 35974000 57783000 62822000 64060000 70704000 49467000 45618000 108110000 54046 930 48538 453828;453829;453830;453831;453832;453833;453834;453835;453836;453837;453838;453839 358687;358688;358689;358690;358691;358692;358693;358694;358695;358696;358697;358698;358699;358700 358690 13 TVIIHDRPDITHPR Unmodified 1668.906 0.90598704 4697 Q9NWH9 SLTM SAFB-like transcription modulator yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 38.277 38.782 4 0.017206 41911 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.613 22.221 57667000 0 0 0 0 0 14597000 0 0 0 0 0 21445000 0 0 21626000 54047 4697 48539 453840;453841;453842 358701;358702 358702 1 TVIKPESCVPCGK Unmodified 1473.732 0.73197035 4329 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 40.724 34.858 3 0.0026461 45916 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.004 47.274 53912000 20532000 33380000 0 0 0 0 0 0 0 0 0 0 0 0 0 54048 4329 48540 453843;453844 358703;358704;358705 358704 3 TVINYDVAR Unmodified 1049.5506 0.55055881 3199 Q86XP3 DDX42 ATP-dependent RNA helicase DDX42 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.671 46.837 2 0.0077875 52839 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 71.501 40.765 188640000 0 0 0 11879000 8339300 14866000 12733000 10806000 6608900 23633000 20653000 20954000 17404000 13599000 27163000 54049 3199 48541 453845;453846;453847;453848;453849;453850;453851;453852;453853;453854;453855;453856 358706;358707;358708;358709;358710;358711;358712;358713;358714 358706 8 TVIPGMPTVIPPGLTR Oxidation (M) 1663.9331 0.93311299 2554 Q15637 SF1 Splicing factor 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 2 1 1 1 1 2 1 2 1 1 81.961 82.036 2 3.2337E-06 94572 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 80.69 74.307 96529000 0 0 0 0 8579600 5643700 4509200 0 3963300 8641700 15738000 8162100 8870600 6483000 25938000 54050 2554 48542 453857;453858;453859;453860;453861;453862;453863;453864;453865;453866;453867;453868;453869 358715;358716;358717;358718;358719;358720;358721;358722;358723 358717 4188 9 TVIPGMPTVIPPGLTR Unmodified 1647.9382 0.93819837 2554 Q15637 SF1 Splicing factor 1 yes yes 0 0 0 By matching By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 90.201 90.26 2 0.019485 104543 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 30.729 23.466 21099000 0 0 0 0 1233200 1029700 0 0 729210 2502200 0 0 0 0 15605000 54051 2554 48542 453870;453871;453872;453873;453874 358724 358724 1 TVIQSLTMYPR Oxidation (M) 1323.6857 0.68567208 3663 Q92797 SYMPK Symplekin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 69.999 70.045 2 0.001201 79741 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.552 25.571 67394000 0 0 0 4364700 3933900 6950000 5426200 6682300 3868400 9128000 0 9291700 7334600 0 10415000 54052 3663 48543 453875;453876;453877;453878;453879;453880;453881;453882;453883;453884;453885 358725;358726;358727;358728;358729;358730;358731;358732;358733;358734;358735;358736;358737 358729 5197 13 TVIQSLTMYPR Unmodified 1307.6908 0.69075746 3663 Q92797 SYMPK Symplekin yes yes 0 0 0 By MS/MS 10 0 1 1 75.528 75.52 2 0.0041643 87174 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 84.213 39.863 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54053 3663 48543 453886 358738 358738 1 TVIRLPSGSGAASPTGSAVDIR Unmodified 2111.1335 0.13348037 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.758 70.83 3 1.9386E-08 81309 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 62.847 46.49 247200000 0 0 0 6247300 7732800 16307000 11880000 27824000 15407000 21258000 22464000 29615000 17097000 19267000 52104000 54054 2172 48544 453887;453888;453889;453890;453891;453892;453893;453894;453895;453896;453897;453898 358739;358740;358741;358742;358743;358744;358745;358746;358747;358748;358749;358750 358744 12 TVISQSLSK Unmodified 961.54441 0.5444108 1398 P38606 ATP6V1A V-type proton ATPase catalytic subunit A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 33.64 32.566 2 0.0018014 42702 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.41 70.56 2178200000 803430000 1027900000 25710000 31516000 12665000 49068000 18324000 15943000 10235000 29240000 32268000 35625000 16305000 26833000 43098000 54055 1398 48545 453899;453900;453901;453902;453903;453904;453905;453906;453907;453908;453909;453910;453911;453912;453913;453914 358751;358752;358753;358754;358755;358756;358757;358758;358759;358760 358752 8 TVITEEFK Unmodified 965.50696 0.50696266 3873 Q96I24 FUBP3 Far upstream element-binding protein 3 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 49.296 49.3 2 0.011003 56031 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 77.923 38.26 185270000 0 0 0 20581000 15148000 29839000 24098000 0 26920000 33073000 0 35608000 0 0 0 54056 3873 48546 453915;453916;453917;453918;453919;453920;453921 358761;358762 358761 2 TVITPDPNLSIDQVGVPR Unmodified 1920.0316 0.031641064 1179 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 2 2 1 1 1 2 1 1 2 2 2 82.411 82.466 2;3 1.4188E-15 95587 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 107.14 65.099 157420000 0 0 0 2327300 8813300 13983000 5516400 7464400 6040800 17679000 10363000 15664000 18337000 16010000 35220000 54057 1179 48547 453922;453923;453924;453925;453926;453927;453928;453929;453930;453931;453932;453933;453934;453935;453936;453937;453938;453939 358763;358764;358765;358766;358767;358768;358769;358770;358771;358772;358773;358774 358772 12 TVIVEPQGGEK Unmodified 1155.6136 0.61355299 4219 Q9BX63 BRIP1 Fanconi anemia group J protein yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 31.134 31.609 2 0.019046 33964 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 43.272 26.176 13292000 0 0 0 0 0 3458700 0 0 0 0 0 4051200 0 0 5782600 54058 4219 48548 453940;453941;453942 358775 358775 1 TVIVHGFTLGEK Unmodified 1299.7187 0.71868677 4626 Q9NSE4 IARS2 Isoleucine--tRNA ligase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 73.701 67.995 3 0.0021711 89624 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.522 69.867 50741000 44958000 0 5782500 0 0 0 0 0 0 0 0 0 0 0 0 54059 4626 48549 453943;453944 358776 358776 0 TVIVNMVDVAK Unmodified 1187.6584 0.6583947 1751 P55010 EIF5 Eukaryotic translation initiation factor 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 78.009 72.8 2 0.0051717 93555 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.15 76.013 218950000 20921000 183750000 14283000 0 0 0 0 0 0 0 0 0 0 0 0 54060 1751 48550 453945;453946;453947 358777;358778;358779 358778 3 TVIVNMVDVAK Oxidation (M) 1203.6533 0.65330932 1751 P55010 EIF5 Eukaryotic translation initiation factor 5 yes yes 0 1 0 By MS/MS By matching By MS/MS 2 0 3 1 1 1 56.238 50.265 2 0.039286 68405 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.706 17.019 102600000 4664700 94484000 3453500 0 0 0 0 0 0 0 0 0 0 0 0 54061 1751 48550 453948;453949;453950 358780 358780 1 TVIVTGANTGIGK Unmodified 1229.698 0.69795133 3398 Q8NBN7 RDH13 Retinol dehydrogenase 13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 46.96 47.074 2 0.00060391 52738 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 89.548 50.526 196270000 0 0 0 13944000 14494000 11233000 18537000 16683000 11655000 18634000 23750000 25867000 25448000 16029000 0 54062 3398 48551 453951;453952;453953;453954;453955;453956;453957;453958;453959;453960;453961 358781;358782;358783;358784;358785;358786;358787;358788;358789;358790;358791 358785 11 TVLASDTHQR Unmodified 1126.5731 0.57308516 4434 Q9H7D7 WDR26 WD repeat-containing protein 26 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 11.468 11.615 2 0.001504 9483 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 90.657 66.502 44215000 0 0 0 1699200 1941000 3221400 2496000 1746600 2377100 3708700 2942800 6079400 3981100 4918800 9102600 54063 4434 48552 453962;453963;453964;453965;453966;453967;453968;453969;453970;453971;453972;453973 358792;358793;358794;358795;358796;358797;358798;358799;358800;358801;358802 358797 11 TVLCGTCGQPADK Unmodified 1405.633 0.63298458 757 P02545 LMNA Prelamin-A/C;Lamin-A/C yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 30.246 25.189 2 0.0013473 33163 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.39 96.796 48088000 4453700 43634000 0 0 0 0 0 0 0 0 0 0 0 0 0 54064 757 48553 453974;453975 358803 358803 1 TVLDLAVVLFETATLRSGYLLPDTK Unmodified 2734.5157 0.51568344 1002 P14625 HSP90B1 Endoplasmin yes yes 0 0 1 By MS/MS 2 0 1 1 106.58 101.83 3 5.6798E-05 125722 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 57.945 55.297 1943000 0 1943000 0 0 0 0 0 0 0 0 0 0 0 0 0 54065 1002 48554 453976 358804 358804 1 TVLDPVTGDLSDTR Unmodified 1487.7468 0.74675201 2528 Q15393 SF3B3 Splicing factor 3B subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 68.75 68.721 2 2.4718E-14 77727 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 126.76 109.74 497990000 0 0 0 30282000 46368000 48860000 41656000 0 0 0 0 0 71221000 95112000 164490000 54066 2528 48555 453977;453978;453979;453980;453981;453982;453983 358805;358806;358807;358808;358809;358810;358811 358808 7 TVLDPVTGDLSDTRTR Unmodified 1744.8955 0.89554151 2528 Q15393 SF3B3 Splicing factor 3B subunit 3 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 61.905 62.014 3 7.7846E-05 69982 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.159 47.059 77800000 0 0 0 2807300 3314500 0 4961000 5513800 4533500 6776900 10634000 8209500 7362900 5992400 17694000 54067 2528 48556 453984;453985;453986;453987;453988;453989;453990;453991;453992;453993;453994 358812;358813;358814;358815;358816;358817;358818 358813 7 TVLDQQQTPSR Unmodified 1271.647 0.64697839 1464 P42704 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 2 1 1 25.512 25.668 2 0.00028854 26121 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 103.7 65.133 37998000 0 0 0 0 4725200 0 0 9432100 3743900 7253700 0 0 0 0 12843000 54068 1464 48557 453995;453996;453997;453998;453999;454000;454001;454002 358819;358820;358821;358822;358823 358821 5 TVLEGSTASTSPADHSALPNQSLTVR Unmodified 2638.3198 0.31983717 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 0 By MS/MS 10 0 1 1 65.318 64.8 3 0.023959 74693 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 18.095 10.818 2610900 0 0 0 0 2610900 0 0 0 0 0 0 0 0 0 0 54069 3443 48558 454003 358824 358824 1 TVLELMNPEAQLPQVYPFAADLYQK Unmodified 2877.4623 0.46226766 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS 2 0 1 1 98.891 96.464 3 0.047642 116512 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 17.794 11.29 11720000 0 0 11720000 0 0 0 0 0 0 0 0 0 0 0 0 54070 1518 48559 454004 358825 358825 1 TVLELQYVLDK Unmodified 1319.7337 0.73366813 2407 Q14444 CAPRIN1 Caprin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 2 2 1 1 1 1 1 1 1 1 1 1 1 1 86.089 85.043 2 1.9273E-05 98715 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 125.48 105.7 643000000 62524000 274430000 14971000 5724200 18379000 21971000 24134000 12047000 37109000 46192000 28640000 21738000 11435000 18065000 45644000 54071 2407 48560 454005;454006;454007;454008;454009;454010;454011;454012;454013;454014;454015;454016;454017;454018;454019;454020;454021 358826;358827;358828;358829;358830;358831;358832;358833;358834;358835;358836;358837;358838;358839;358840;358841;358842;358843;358844 358836 19 TVLEQVLPI Unmodified 1010.6012 0.60119739 1191 P25685 DNAJB1 DnaJ homolog subfamily B member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 92.797 92.9 2 0.003469 107499 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.407 94.407 179070000 0 0 0 3393700 0 0 15416000 9141300 8336200 20537000 18821000 15501000 12344000 20011000 55568000 54072 1191 48561 454022;454023;454024;454025;454026;454027;454028;454029;454030;454031 358845;358846;358847;358848;358849;358850;358851;358852 358847 7 TVLHTGSAPSSSTPFNK Unmodified 1729.8635 0.8635131 199 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 50.359 44.173 3 2.01E-07 60581 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.767 88.97 218800000 165270000 53535000 0 0 0 0 0 0 0 0 0 0 0 0 0 54073 199 48562 454032;454033;454034 358853;358854;358855 358855 3 TVLIACNVK Unmodified 1016.5689 0.56885141 1183 P25205 MCM3 DNA replication licensing factor MCM3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 45.93 46.291 2 0.0069894 50770 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.616 42.387 56022000 0 0 0 0 0 5288800 0 0 4327100 4811900 8913300 5494700 6906800 8129000 12150000 54074 1183 48563 454035;454036;454037;454038;454039;454040;454041;454042 358856;358857;358858;358859;358860;358861 358857 6 TVLMNPNIASVQTNEVGLK Oxidation (M) 2043.067 0.067040293 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 1 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.08 2.5 2 1 22 1 2 2 2 1 3 2 1 3 1 2 1 2 2 76.017 75.415 2;3 1.1858E-46 86326 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 125.61 102.69 270370000 6589000 147140000 0 4419300 6332900 3666500 12360000 8494200 5659600 16241000 6283000 14801000 4598600 10272000 23513000 54075 1300 48564 454043;454044;454045;454046;454047;454048;454049;454050;454051;454052;454053;454054;454055;454056;454057;454058;454059;454060;454061;454062;454063;454064;454065;454066;454067 358862;358863;358864;358865;358866;358867;358868;358869;358870;358871;358872;358873 358870 1921 11 TVLMNPNIASVQTNEVGLK Unmodified 2027.0721 0.072125671 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 6.56 3.86 3 1 5 1 2 1 1 1 1 1 1 81.66 79.688 2;3 1.819E-87 99194 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 178.67 166.69 559970000 12939000 512160000 1439200 0 0 0 0 3204500 0 0 8022500 3663200 0 4873800 13670000 54076 1300 48564 454068;454069;454070;454071;454072;454073;454074;454075;454076 358874;358875;358876;358877;358878;358879;358880;358881 358874 7 TVLNQILR Unmodified 955.58147 0.581465 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 70.028 70.261 2 0.010049 81097 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 111.28 32.162 70954000 0 0 0 0 0 11686000 0 3489700 0 9467800 6667900 15334000 0 0 24309000 54077 3119 48565 454077;454078;454079;454080;454081;454082;454083 358882;358883;358884;358885;358886;358887 358887 6 TVLNSEVLEQR Unmodified 1286.683 0.68302954 6 A0MZ66 KIAA1598 Shootin-1 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 56.507 56.741 2 0.00033197 63538 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 113.62 63.582 18554000 0 0 0 0 2505000 0 0 0 0 0 0 8801400 0 0 7247800 54078 6 48566 454084;454085;454086 358888;358889 358888 2 TVLNSEVLEQRK Unmodified 1414.778 0.77799256 6 A0MZ66 KIAA1598 Shootin-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.86 3.49 5 1 16 2 2 2 1 1 1 1 1 1 1 2 2 1 2 2 48.243 46.776 2;3 1.4677E-06 65226 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 117.7 91.76 820330000 369810000 112960000 103670000 13886000 8557600 17737000 10997000 0 12885000 15508000 28674000 36462000 16971000 24897000 47307000 54079 6 48567 454087;454088;454089;454090;454091;454092;454093;454094;454095;454096;454097;454098;454099;454100;454101;454102;454103;454104;454105;454106;454107;454108 358890;358891;358892;358893;358894;358895;358896;358897;358898;358899;358900;358901;358902;358903;358904;358905;358906;358907 358899 15 TVLPFSQEFQR Unmodified 1350.6932 0.6932003 3050 Q7L576 CYFIP1 Cytoplasmic FMR1-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.397 79.457 2 0.0016512 91793 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 71.349 59.501 172180000 0 0 0 12532000 7239800 14181000 8566600 13827000 8882300 21646000 13283000 18677000 11583000 11533000 30228000 54080 3050 48568 454109;454110;454111;454112;454113;454114;454115;454116;454117;454118;454119;454120 358908;358909;358910;358911;358912;358913;358914;358915;358916;358917;358918;358919;358920 358908 13 TVLPTVPESPEEEVK Unmodified 1652.8509 0.85088273 464 O75152 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 71.601 71.05 2 0.0002554 82700 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 84.718 66.853 394230000 0 58124000 0 15841000 20447000 26451000 29260000 24560000 19991000 29049000 32962000 43322000 31021000 25757000 37449000 54081 464 48569 454121;454122;454123;454124;454125;454126;454127;454128;454129;454130;454131;454132;454133;454134 358921;358922;358923;358924;358925;358926;358927;358928 358928 5 TVLQDERQSQALILK Unmodified 1740.9734 0.9733979 2756 Q5SRE5 NUP188 Nucleoporin NUP188 homolog yes yes 0 0 1 By MS/MS 2 0 1 1 72.619 64.381 3 0.017076 85462 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 38.995 19.327 29220000 29220000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54082 2756 48570 454135 358929 358929 1 TVLQEIK Unmodified 829.49092 0.49091866 3244 Q8IWS0 PHF6 PHD finger protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 41.497 41.229 2 0.031266 46078 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 73.975 36.881 430180000 0 280880000 0 0 8681100 0 12694000 10253000 9371800 14829000 19245000 20723000 12768000 14660000 26077000 54083 3244 48571 454136;454137;454138;454139;454140;454141;454142;454143;454144;454145;454146 358930;358931 358931 2 TVLQIDDNVTSAVEGINR Unmodified 1942.996 0.99598384 2577 Q15785 TOMM34 Mitochondrial import receptor subunit TOM34 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 82.424 82.521 2 2.031E-37 95535 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 127.76 104.38 29095000 0 0 0 0 2600900 0 0 2573300 0 5477900 5705900 5806400 0 0 6930500 54084 2577 48572 454147;454148;454149;454150;454151;454152 358932;358933;358934;358935;358936 358932 5 TVLQMDELK Unmodified 1075.5583 0.5583463 1451 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.698 60.802 2 0.012989 68956 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.478 5.8661 77807000 0 0 0 3970600 3595300 6696800 4361300 6891300 2973700 8896400 7982400 11132000 7584100 9818000 3905100 54085 1451 48573 454153;454154;454155;454156;454157;454158;454159;454160;454161;454162;454163;454164 358937;358938;358939;358940;358941;358942;358943 358943 7 TVLQMDELK Oxidation (M) 1091.5533 0.55326092 1451 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 39.397 39.765 2 0.029906 44241 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 43.218 9.4217 35151000 0 0 0 0 0 0 2682500 0 3604300 4781900 3895100 6117400 4584200 5645100 3840400 54086 1451 48573 454165;454166;454167;454168;454169;454170;454171;454172 358944;358945 358944 2 TVLQRPLSLIQGPPGTGK Unmodified 1861.0785 0.078531678 3683 Q92900 UPF1 Regulator of nonsense transcripts 1 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 77.137 77.205 3 5.8348E-06 88667 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.953 64.994 52969000 0 0 0 1695300 0 6644000 0 3339600 5560700 6490200 0 4076500 0 0 25163000 54087 3683 48574 454173;454174;454175;454176;454177;454178;454179 358946;358947;358948;358949;358950;358951 358948 6 TVLSAESEELNR Unmodified 1346.6678 0.66777341 4998 Q9ULK4 MED23 Mediator of RNA polymerase II transcription subunit 23 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 47.828 48.043 2 0.0016062 53147 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 79.974 49.41 68111000 0 0 0 4927300 0 6252800 5533600 6777300 4625100 10250000 7768200 6576000 0 6963100 8437200 54088 4998 48575 454180;454181;454182;454183;454184;454185;454186;454187;454188;454189 358952;358953;358954;358955;358956;358957;358958;358959;358960 358958 9 TVLSANADHMAQIEGLMDDVDFK Oxidation (M) 2535.1621 0.16213924 5206 Q9Y4L1 HYOU1 Hypoxia up-regulated protein 1 yes yes 0 1 0 By MS/MS By matching 2 0 4 2 2 87.835 84.192 3 6.1683E-05 106450 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.611 54.899 64663000 0 62144000 2519300 0 0 0 0 0 0 0 0 0 0 0 0 54089 5206 48576 454190;454191;454192;454193 358961;358962 358962 6608;6609 2 TVLSANADHMAQIEGLMDDVDFK Unmodified 2519.1672 0.16722462 5206 Q9Y4L1 HYOU1 Hypoxia up-regulated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 2 3 1 95.661 90.969 2;3 2.7573E-96 113637 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 146.76 121.25 377110000 195040000 180770000 1303000 0 0 0 0 0 0 0 0 0 0 0 0 54090 5206 48576 454194;454195;454196;454197;454198;454199 358963;358964;358965;358966;358967;358968;358969 358963 7 TVLSGSIMQGTPR Unmodified 1345.7024 0.70238478 488 O75376 NCOR1 Nuclear receptor corepressor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.935 61.021 2 0.00045173 69558 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 79.693 51.951 35619000 0 0 0 4304200 2465200 3528000 2421700 3401800 2017600 4866300 4135300 3402500 0 0 5076800 54091 488 48577 454200;454201;454202;454203;454204;454205;454206;454207;454208;454209;454210;454211 358970;358971;358972;358973;358974;358975;358976;358977 358973 8 TVLSLFDEEEDK Unmodified 1423.6719 0.67185573 2840;5195 Q641Q2;Q9Y4E1 FAM21A;FAM21C WASH complex subunit FAM21A;WASH complex subunit FAM21C no no 0 0 0 By MS/MS 2 0 1 1 85.194 80.45 2 0.010733 100081 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 63.32 40.791 19328000 0 19328000 0 0 0 0 0 0 0 0 0 0 0 0 0 54092 2840;5195 48578 454212 358978 358978 1 TVLSNNLSPFAMDK Oxidation (M) 1551.7603 0.76029359 2171 Q09472 EP300 Histone acetyltransferase p300 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 72.962 72.977 2 1.0994E-12 84057 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 104.87 97.848 180180000 0 0 0 13157000 12747000 18758000 13542000 16810000 20951000 16332000 0 30635000 19248000 18005000 0 54093 2171 48579 454213;454214;454215;454216;454217;454218;454219;454220;454221;454222 358979;358980;358981;358982;358983;358984;358985;358986;358987;358988 358979 3498 9 TVLSNNLSPFAMDK Unmodified 1535.7654 0.76537896 2171 Q09472 EP300 Histone acetyltransferase p300 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80.027 78.887 2 2.1592E-17 91041 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 124.39 98.447 162000000 23295000 42392000 1219500 3361500 3368700 0 4270300 10665000 0 9574000 10215000 10699000 5984300 10274000 26683000 54094 2171 48579 454223;454224;454225;454226;454227;454228;454229;454230;454231;454232;454233;454234;454235;454236;454237 358989;358990;358991;358992;358993;358994;358995;358996;358997;358998;358999;359000;359001;359002 358994 14 TVLSNVQEELDR Unmodified 1401.71 0.70997257 306 O43237 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 73.716 73.601 2 1.474E-08 84253 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 141.27 90.2 21666000 0 0 0 0 12678000 0 8988100 0 0 0 0 0 0 0 0 54095 306 48580 454238;454239;454240;454241;454242;454243;454244;454245;454246;454247;454248 359003;359004;359005;359006;359007;359008;359009;359010;359011;359012;359013 359006 11 TVLSSHK Unmodified 770.42865 0.42865276 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By matching By MS/MS 2 0 3 1 1 1 6.9774 3.9855 2 0.035514 7499 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.244 39.633 2240800000 1260200000 515970000 464630000 0 0 0 0 0 0 0 0 0 0 0 0 54096 3641 48581 454249;454250;454251 359014 359014 1 TVLSSSLNNHPQTSVPNASALHPSLR Unmodified 2726.41 0.40998959 2975 Q6UUV7 CRTC3 CREB-regulated transcription coactivator 3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 18 1 1 2 1 1 2 2 1 2 2 1 2 69.668 69.786 3;4 3.781E-15 80071 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 66.138 45.939 299040000 0 0 0 2984600 5968500 28464000 9826100 23730000 27092000 27595000 17240000 38054000 17524000 16038000 84527000 54097 2975 48582 454252;454253;454254;454255;454256;454257;454258;454259;454260;454261;454262;454263;454264;454265;454266;454267;454268;454269 359015;359016;359017;359018;359019;359020;359021 359021 5 TVLTAADVLPDGPFPQDEK Unmodified 2012.0102 0.01023692 4414 Q9H6E4 CCDC134 Coiled-coil domain-containing protein 134 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 11 1 1 1 1 2 1 1 1 1 1 85.297 85.423 2;3 8.6056E-24 99174 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 100.19 78.886 40894000 0 0 0 0 0 3878300 0 3143200 2666900 11228000 0 6199200 2719900 2940100 8118000 54098 4414 48583 454270;454271;454272;454273;454274;454275;454276;454277;454278;454279;454280 359022;359023;359024;359025;359026;359027;359028;359029 359028 8 TVLTELQAK Unmodified 1001.5757 0.57571092 2986 Q6VMQ6 ATF7IP Activating transcription factor 7-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 53.223 52.597 2 0.027043 59394 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 49.57 21.735 331960000 0 250080000 3114800 4126900 4511000 8932600 4168600 0 4978400 9278200 8238000 7145600 7929000 8089000 11372000 54099 2986 48584 454281;454282;454283;454284;454285;454286;454287;454288;454289;454290;454291;454292;454293 359030;359031;359032;359033 359030 4 TVMDEGPQVFAPLSEESK Oxidation (M) 1978.9194 0.919373 311 O43264 ZW10 Centromere/kinetochore protein zw10 homolog yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 8.12 3.26 1 1 6 2 1 1 1 1 1 1 76.716 75.729 2 8.8705E-05 87756 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 62.14 48.234 103160000 0 77196000 0 0 3100000 5033800 6483400 0 1955900 0 0 0 4564500 4824500 0 54100 311 48585 454294;454295;454296;454297;454298;454299;454300;454301 359034;359035;359036;359037;359038;359039;359040 359034 401 6 TVMDEGPQVFAPLSEESK Unmodified 1962.9245 0.92445838 311 O43264 ZW10 Centromere/kinetochore protein zw10 homolog yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 81.955 80.865 2 3.7432E-15 99504 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 160.44 145.56 236280000 0 225230000 0 0 0 0 0 0 0 0 3497400 0 3897300 3659900 0 54101 311 48585 454302;454303;454304;454305;454306;454307 359041;359042;359043;359044;359045 359042 5 TVMENFVAFVDK Oxidation (M) 1414.6803 0.68025235 65 CON__P02769 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.7 1.51 1 26 1 2 2 2 2 2 2 2 3 2 3 2 2 79.073 79.138 2 1.3268E-05 91186 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 104.52 85.545 + 1863700000 0 0 0 133540000 194750000 129920000 103280000 135530000 143040000 305900000 213750000 193740000 90937000 85533000 133820000 54102 65 48586 454308;454309;454310;454311;454312;454313;454314;454315;454316;454317;454318;454319;454320;454321;454322;454323;454324;454325;454326;454327;454328;454329;454330;454331;454332;454333;454334 359046;359047;359048;359049;359050;359051;359052;359053;359054;359055;359056;359057;359058;359059;359060;359061;359062;359063;359064;359065 359062 73 18 TVMENFVAFVDK Unmodified 1398.6853 0.68533773 65 CON__P02769 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 88.198 88.268 2 0.0004063 102337 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 93.058 84.838 + 111680000 0 0 0 3449800 5249900 6125100 3014600 7072200 6182300 27547000 13851000 7303200 1853100 6300800 23727000 54103 65 48586 454335;454336;454337;454338;454339;454340;454341;454342;454343;454344;454345;454346 359066;359067;359068;359069;359070;359071;359072;359073;359074;359075;359076;359077 359067 12 TVMGAAPELK Oxidation (M) 1031.5321 0.53213155 4815 Q9P2D3 HEATR5B HEAT repeat-containing protein 5B yes yes 0 1 0 By MS/MS 2 0 1 1 34.054 29.41 2 0.032062 38476 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 56.258 26.882 13061000 0 13061000 0 0 0 0 0 0 0 0 0 0 0 0 0 54104 4815 48587 454347 359078 359078 1 TVMLIPGDK Unmodified 972.5314 0.53140327 4810 Q9P287 BCCIP BRCA2 and CDKN1A-interacting protein yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 57.566 57.964 2 0.014892 64926 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.859 35.931 35270000 0 0 0 0 0 0 0 0 0 0 9488300 0 0 6535300 19247000 54105 4810 48588 454348;454349;454350 359079 359079 1 TVMPYISTTPAK Unmodified 1307.6795 0.67952407 813 P05556 ITGB1 Integrin beta-1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 63.651 63.315 2 0.0027969 71555 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.353 43.489 185450000 0 73095000 0 0 11303000 9464500 9192700 9603700 5801400 11382000 11651000 15922000 9159400 8029500 10848000 54106 813 48589 454351;454352;454353;454354;454355;454356;454357;454358;454359;454360;454361;454362 359080;359081;359082;359083;359084;359085;359086;359087;359088;359089;359090;359091 359084 12 TVMPYISTTPAK Oxidation (M) 1323.6744 0.67443869 813 P05556 ITGB1 Integrin beta-1 yes yes 0 1 0 By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 9 1 1 1 2 1 1 1 1 46.516 46.531 2 0.009203 52931 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 43.77 10.392 37877000 0 0 0 7928000 3518100 0 3604000 4006400 2720300 3751200 7178300 0 0 5170800 0 54107 813 48589 454363;454364;454365;454366;454367;454368;454369;454370;454371 359092;359093 359093 975 2 TVMVNIENPEGIPVK Unmodified 1638.8651 0.86509301 741 P01024 C3 Complement C3;Complement C3 beta chain;C3-beta-c;Complement C3 alpha chain;C3a anaphylatoxin;Acylation stimulating protein;Complement C3b alpha' chain;Complement C3c alpha' chain fragment 1;Complement C3dg fragment;Complement C3g fragment;Complement C3d fragment;Complement C3f fragment;Complement C3c alpha' chain fragment 2 yes yes 0 0 0 By MS/MS 10 0 1 1 77.781 77.969 2 0.02595 89976 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 49.448 31.639 4054400 0 0 0 0 0 0 0 4054400 0 0 0 0 0 0 0 54108 741 48590 454372 359094 359094 0 TVNATGSSAAPGSSDK Unmodified 1448.6743 0.67431535 5059 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 12.747 12.98 2 1.9417E-06 12243 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 83.314 64.534 20099000 0 0 0 0 0 3934200 0 0 2755700 3364400 1507800 0 3236100 1722800 3577600 54109 5059 48591 454373;454374;454375;454376;454377;454378;454379 359095;359096;359097;359098;359099;359100 359096 6 TVNATGSSAAPGSSDKPSDPR Unmodified 2000.9399 0.93992552 5059 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.303 21.507 3 6.3427E-05 21235 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 50.358 38.983 199200000 0 0 0 14210000 12348000 14707000 19307000 10110000 12569000 13004000 12345000 20041000 21425000 24997000 24135000 54110 5059 48592 454380;454381;454382;454383;454384;454385;454386;454387;454388;454389;454390;454391 359101;359102;359103;359104;359105;359106;359107;359108;359109;359110;359111;359112;359113 359108 13 TVNAVVEFFQSNK Unmodified 1481.7514 0.75144346 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 84.738 84.873 2 9.5927E-09 98304 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 110.66 93.636 42419000 0 0 0 0 0 4617800 2420700 4299800 3604300 7786500 4965600 6312500 3105300 5306200 0 54111 3023 48593 454392;454393;454394;454395;454396;454397;454398;454399;454400 359114;359115;359116;359117;359118;359119;359120 359115 7 TVNDLSSQLSPLDLHPSLK Unmodified 2063.0899 0.089884225 1517 P46939 UTRN Utrophin yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 86.247 82.626 3 3.7067E-06 102955 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.914 51.967 30212000 0 27138000 3074600 0 0 0 0 0 0 0 0 0 0 0 0 54112 1517 48594 454401;454402 359121;359122 359122 2 TVNDYTHALLR Unmodified 1301.6728 0.67279921 2087 Q03014 HHEX Hematopoietically-expressed homeobox protein HHEX yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 56.596 56.715 3 0.0018901 64287 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 62.466 53.721 93632000 0 0 0 3626700 5052200 7738000 9648000 0 7695100 9972500 10526000 9057300 9972200 10206000 10138000 54113 2087 48595 454403;454404;454405;454406;454407;454408;454409;454410;454411;454412;454413 359123;359124;359125;359126;359127;359128;359129;359130;359131;359132;359133 359128 11 TVNEDVEEMEIDEQTK Unmodified 1907.8306 0.83061757 4605 Q9NRL2 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A yes yes 0 0 0 By MS/MS 2 0 1 1 64.424 58.516 2 1.0871E-31 74945 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 159.08 129.15 10526000 0 10526000 0 0 0 0 0 0 0 0 0 0 0 0 0 54114 4605 48596 454414 359134 359134 1 TVNELQNLSSAEVVVPR Unmodified 1853.9847 0.98469087 153 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching 10 0 5 1 1 1 1 1 80.294 80.35 3 9.0173E-08 92913 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 57.52 46.464 28086000 0 0 0 0 2498200 0 0 0 0 0 0 9823700 0 5559500 10204000 54115 153 48597 454415;454416;454417;454418;454419 359135;359136 359135 2 TVNELQNLTAAEVVVPRDQTPDENDQVIVK Unmodified 3333.7052 0.70522813 4768 Q9NZI8 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 88.253 83.411 3 2.5806E-57 103700 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.1 102.72 21837000 0 21837000 0 0 0 0 0 0 0 0 0 0 0 0 0 54116 4768 48598 454420 359137;359138 359137 2 TVNESHGSVER Unmodified 1213.5687 0.56872807 2838 Q63HN8 RNF213 E3 ubiquitin-protein ligase RNF213 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.526 6.6502 3 0.0065237 3587 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 38.875 28.882 35785000 0 0 0 2556000 1766400 3770700 2146700 2094400 1981500 3363000 3670400 3846500 2648000 2435900 5505100 54117 2838 48599 454421;454422;454423;454424;454425;454426;454427;454428;454429;454430;454431;454432 359139;359140;359141;359142;359143;359144 359142 6 TVNFDIIK Unmodified 948.52803 0.52803245 379 O43913 ORC5 Origin recognition complex subunit 5 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.857 71.926 2 0.037577 83777 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 51.335 8.4211 229030000 0 0 0 12516000 1010400 21206000 17938000 21433000 14475000 20999000 22199000 26743000 20227000 20110000 30172000 54118 379 48600 454433;454434;454435;454436;454437;454438;454439;454440;454441;454442;454443;454444 359145;359146;359147 359147 3 TVNGIENK Unmodified 873.4556 0.45559579 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 0 By MS/MS 10 0 1 1 10.422 10.379 2 0.044749 9145 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 48.787 4.9727 2279300 0 0 0 0 0 2279300 0 0 0 0 0 0 0 0 0 54119 2804 48601 454445 359148 359148 1 TVNIPVLK Unmodified 882.55385 0.55385327 2664 Q32P41 TRMT5 tRNA (guanine(37)-N1)-methyltransferase yes yes 0 0 0 By MS/MS 2 0 1 1 74.427 69.272 2 0.026665 87030 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.116 36.116 45601000 0 45601000 0 0 0 0 0 0 0 0 0 0 0 0 0 54120 2664 48602 454446 359149 359149 1 TVNLSVTPSPAPR Unmodified 1337.7303 0.73031409 3290 Q8IZ21 PHACTR4 Phosphatase and actin regulator 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 55.116 55.253 2 0.0010925 62708 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 81.017 65.135 66584000 0 0 0 3618300 4667100 0 4366800 4703600 4340900 7442600 9544900 8541400 4482300 5179700 9696300 54121 3290 48603 454447;454448;454449;454450;454451;454452;454453;454454;454455;454456;454457 359150;359151;359152;359153;359154;359155;359156;359157 359151 8 TVNQQTMAAPVVK Oxidation (M) 1401.7286 0.72859953 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 2 1 1 1 2 2 2 2 1 2 2 2 28.166 28.37 2 1.8809E-09 30407 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 114.5 86.292 269170000 0 0 0 21420000 13596000 9786600 14680000 20112000 23993000 29977000 20309000 21879000 37322000 24681000 31417000 54122 5216 48604 454458;454459;454460;454461;454462;454463;454464;454465;454466;454467;454468;454469;454470;454471;454472;454473;454474;454475;454476;454477 359158;359159;359160;359161;359162;359163;359164;359165;359166;359167;359168;359169;359170;359171;359172 359167 6624 11 TVNQQTMAAPVVK Unmodified 1385.7337 0.7336849 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 43.671 43.404 2 1.5149E-15 48583 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 146.11 121.33 411600000 0 33748000 0 24309000 21144000 22279000 23464000 27622000 24609000 31976000 45516000 37696000 39626000 30171000 49436000 54123 5216 48604 454478;454479;454480;454481;454482;454483;454484;454485;454486;454487;454488;454489;454490 359173;359174;359175;359176;359177;359178;359179;359180;359181;359182;359183;359184;359185 359179 13 TVNVPFHLALSDK Unmodified 1439.7773 0.77726428 4370 Q9H2M9 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 80.124 79.016 3 0.00061605 90780 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.234 48.135 191740000 43938000 29930000 2386300 0 4220500 17631000 5906100 9906500 11295000 11125000 8403400 0 11784000 11186000 24033000 54124 4370 48605 454491;454492;454493;454494;454495;454496;454497;454498;454499;454500;454501;454502;454503 359186;359187;359188;359189;359190;359191;359192;359193;359194;359195;359196;359197 359190 12 TVNVVQFEPSK Unmodified 1246.6558 0.65575216 1440 P41250 GARS Glycine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 61.199 59.942 2 3.5506E-09 76986 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.07 101.78 1661800000 44227000 1151300000 24074000 16065000 17443000 31764000 22308000 20115000 14227000 35453000 51603000 46641000 27607000 45819000 113130000 54125 1440 48606 454504;454505;454506;454507;454508;454509;454510;454511;454512;454513;454514;454515;454516;454517;454518;454519;454520 359198;359199;359200;359201;359202;359203;359204;359205;359206;359207;359208;359209;359210;359211;359212;359213;359214;359215;359216;359217 359204 18 TVPATSQLSK Unmodified 1030.5659 0.56587452 5000 Q9ULM3 YEATS2 YEATS domain-containing protein 2 yes yes 0 0 0 By MS/MS 10 0 1 1 24.272 24.952 2 0.0068811 26054 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 63.816 8.4462 23616000 0 0 0 0 0 0 0 0 0 0 0 23616000 0 0 0 54126 5000 48607 454521 359218 359218 1 TVPCGNELHK Unmodified 1153.555 0.55499226 2336 Q13636 RAB31 Ras-related protein Rab-31 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 19.425 18.761 3 0.0062508 24829 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 61.78 49.203 51625000 0 16623000 1790400 0 3742600 3057200 3782300 5582800 4209200 5659500 0 7177800 0 0 0 54127 2336 48608 454522;454523;454524;454525;454526;454527;454528;454529;454530 359219;359220 359219 2 TVPEELVKPEELSK Unmodified 1596.8611 0.86105349 5017 Q9UMS4 PRPF19 Pre-mRNA-processing factor 19 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.38 3.18 5 1 23 1 3 2 2 2 2 1 2 2 2 2 2 2 2 2 63.093 62.059 2;3 7.913E-12 70584 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 82.55 63.264 5512000000 52105000 3857700000 55485000 92541000 84109000 125330000 14918000 92284000 93667000 141980000 189780000 185790000 135320000 133910000 257130000 54128 5017 48609 454531;454532;454533;454534;454535;454536;454537;454538;454539;454540;454541;454542;454543;454544;454545;454546;454547;454548;454549;454550;454551;454552;454553;454554;454555;454556;454557;454558;454559 359221;359222;359223;359224;359225;359226;359227;359228;359229;359230;359231;359232;359233;359234;359235;359236;359237;359238;359239;359240;359241;359242;359243;359244;359245;359246;359247;359248;359249 359244 22 TVPEIEK Unmodified 814.44363 0.44363412 1069 P18074 ERCC2 TFIIH basal transcription factor complex helicase XPD subunit yes yes 0 0 0 By MS/MS 10 0 1 1 27.003 26.781 2 0.023469 29033 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 92.187 28.9 8366500 0 0 0 8366500 0 0 0 0 0 0 0 0 0 0 0 54129 1069 48610 454560 359250 359250 1 TVPLAGHVGFDSLPDQLVNK Unmodified 2106.111 0.11095402 2373 Q14141 SEPT6 Septin-6 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 83.182 83.274 3 1.6133E-05 96467 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 59.512 53.076 53437000 0 0 0 0 2228900 3810300 0 2213300 3375100 7189900 14985000 0 0 0 19634000 54130 2373 48611 454561;454562;454563;454564;454565;454566;454567 359251;359252;359253;359254 359254 4 TVPLLLAESK Unmodified 1069.6383 0.63831118 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 73.261 73.321 2 0.021168 84292 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 46.819 28.088 252220000 0 0 0 12318000 18723000 14564000 0 27372000 14066000 29283000 24908000 33161000 26672000 25066000 26090000 54131 3023 48612 454568;454569;454570;454571;454572;454573;454574;454575;454576;454577;454578 359255;359256;359257;359258;359259 359255 4 TVPLYESPRK Unmodified 1188.6503 0.65027285 2608 Q16531 DDB1 DNA damage-binding protein 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.822 33.006 3 0.0059055 36028 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 48.44 29.933 408590000 0 0 0 18376000 13757000 29526000 16611000 19687000 16226000 39682000 56469000 60761000 25733000 34445000 77318000 54132 2608 48613 454579;454580;454581;454582;454583;454584;454585;454586;454587;454588;454589;454590 359260;359261;359262;359263;359264;359265;359266;359267 359262 7 TVPPVDIVFER Unmodified 1270.6921 0.69213767 2189 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 83.319 83.382 2 0.021062 96599 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 62.303 43.032 102360000 0 0 0 3302200 4909400 9357100 4245300 4282900 5758300 10557000 8992100 8436800 9274200 11108000 22133000 54133 2189 48614 454591;454592;454593;454594;454595;454596;454597;454598;454599;454600;454601;454602 359268;359269;359270;359271;359272 359269 3 TVPQSQTQPLHK Unmodified 1362.7256 0.72556306 3823 Q96EV2 RBM33 RNA-binding protein 33 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.484 18.678 3 0.034816 19244 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 42.475 26.936 122590000 0 0 0 10381000 9723300 9466600 11192000 9268500 9643500 10974000 8583700 11955000 10222000 6552700 14631000 54134 3823 48615 454603;454604;454605;454606;454607;454608;454609;454610;454611;454612;454613;454614 359273;359274;359275;359276 359273 3 TVPQSSLTMGQLYEK Unmodified 1680.8393 0.83927219 1812 P60520 GABARAPL2 Gamma-aminobutyric acid receptor-associated protein-like 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 75.185 68.542 2 1.0679E-10 87168 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.7 136.7 276160000 6744400 269410000 0 0 0 0 0 0 0 0 0 0 0 0 0 54135 1812 48616 454615;454616 359277;359278 359277 2 TVPSTPTLVVPHR Unmodified 1402.7932 0.79324869 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 1 1 2 1 1 1 2 2 1 1 2 60.068 60.245 2;3 0.0005563 68383 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.567 52.356 228600000 0 0 0 12861000 7679900 12507000 20334000 12447000 13555000 17308000 27652000 30117000 14257000 19718000 40168000 54136 965 48617 454617;454618;454619;454620;454621;454622;454623;454624;454625;454626;454627;454628;454629;454630;454631;454632 359279;359280;359281;359282;359283;359284;359285;359286;359287;359288;359289;359290;359291;359292;359293 359290 13 TVPVEAVTSK Unmodified 1029.5706 0.57062555 2399 Q14247 CTTN Src substrate cortactin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36.227 35.361 2 0.0039682 44775 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.867 56.511 1111700000 19500000 381340000 2488000 39745000 47876000 45886000 56683000 55759000 42317000 63750000 73407000 87216000 56557000 48293000 90862000 54137 2399 48618 454633;454634;454635;454636;454637;454638;454639;454640;454641;454642;454643;454644;454645;454646;454647 359294;359295 359294 1 TVPVPDTGDSVELFIFDSAGK Unmodified 2193.0841 0.084130145 4204 Q9BW83 IFT27 Intraflagellar transport protein 27 homolog yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 97.747 92.028 2 1.3781E-12 116237 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 118.21 113.23 24219000 22086000 2133100 0 0 0 0 0 0 0 0 0 0 0 0 0 54138 4204 48619 454648;454649 359296;359297 359297 2 TVQAAPPALPGPPGAPVNMYSR Oxidation (M) 2206.1205 0.12047285 242 O15027 SEC16A Protein transport protein Sec16A yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 75.386 75.52 3 4.0338E-06 86644 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 50.752 42.663 63583000 0 0 0 0 0 9923900 0 7047200 10313000 12919000 11773000 0 0 11607000 0 54139 242 48620 454650;454651;454652;454653;454654;454655 359298;359299;359300;359301;359302 359299 332 5 TVQAAPPALPGPPGAPVNMYSR Unmodified 2190.1256 0.12555822 242 O15027 SEC16A Protein transport protein Sec16A yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 2 1 1 1 1 2 2 80.258 80.378 2;3 0.0012013 92166 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 39.509 34.332 113060000 0 0 0 0 2184500 0 0 14326000 0 10510000 18651000 15292000 8040400 14721000 29338000 54140 242 48620 454656;454657;454658;454659;454660;454661;454662;454663;454664;454665;454666 359303;359304;359305;359306 359306 4 TVQAGLGQADALTR Unmodified 1399.7419 0.7419414 2278 Q13395 TARBP1 Probable methyltransferase TARBP1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 53.47 53.885 2 0.0019519 60959 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 53.388 35.523 4630200 0 0 0 0 0 0 0 0 0 0 4630200 0 0 0 0 54141 2278 48621 454667;454668 359307;359308 359308 2 TVQDALESLVAR Unmodified 1300.6987 0.69867961 2439 Q14694 USP10 Ubiquitin carboxyl-terminal hydrolase 10 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 83.694 83.783 2 0.0027969 97015 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 73.067 43.98 50074000 0 0 0 0 2966300 5146500 0 3468300 0 8726300 4120900 5090200 4359900 5297500 10898000 54142 2439 48622 454669;454670;454671;454672;454673;454674;454675;454676;454677 359309;359310;359311;359312;359313;359314 359309 6 TVQGSGHQEHINIHK Unmodified 1683.8441 0.84411507 2399 Q14247 CTTN Src substrate cortactin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.34 3.24 6 23 2 2 2 2 1 2 2 2 2 2 2 2 2 2 2 15.498 14.871 3;4 0.00019046 13198 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 67.095 52.915 926910000 217460000 32287000 17740000 32703000 8565200 44706000 38619000 26656000 28605000 58292000 61058000 101860000 67890000 51222000 139250000 54143 2399 48623 454678;454679;454680;454681;454682;454683;454684;454685;454686;454687;454688;454689;454690;454691;454692;454693;454694;454695;454696;454697;454698;454699;454700;454701;454702;454703;454704;454705;454706 359315;359316;359317;359318;359319;359320;359321;359322;359323;359324 359321 7 TVQHQDCSPLSGDYVIEDVQGDDK Unmodified 2704.1923 0.1922534 3361 Q8N6R0 METTL13 Methyltransferase-like protein 13 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 72.369 72.529 3 2.651E-14 83408 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 65.753 61.591 33683000 0 0 0 0 0 4816100 0 0 0 0 0 0 4857700 7418000 16591000 54144 3361 48624 454707;454708;454709;454710;454711 359325;359326;359327;359328 359326 4 TVQHQDSQVNALEVTPDR Unmodified 2035.9923 0.99229545 4184 Q9BVC4 MLST8 Target of rapamycin complex subunit LST8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 45.651 45.894 3 1.4592E-06 51479 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 77.39 59.69 101750000 0 0 0 0 5693200 5813700 8383900 0 5739000 14877000 12789000 13363000 10361000 11088000 13640000 54145 4184 48625 454712;454713;454714;454715;454716;454717;454718;454719;454720;454721 359329;359330;359331;359332;359333;359334;359335;359336;359337;359338;359339 359335 11 TVQIEASTVEIEER Unmodified 1602.8101 0.81008055 2474 Q15019 SEPT2 Septin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 65.082 65.232 2 5.4691E-08 74542 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 95.401 64.215 36971000 0 0 0 0 2692800 3367200 2624400 0 0 6768300 8621900 6598600 0 0 6297900 54146 2474 48626 454722;454723;454724;454725;454726;454727;454728;454729 359340;359341;359342;359343;359344;359345;359346;359347 359344 8 TVQILEGQK Unmodified 1014.571 0.5709599 413 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 38.372 38.646 2 0.0030604 43050 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 91.853 42.495 15465000 0 0 0 0 0 0 3009900 0 0 0 10210000 0 0 2245100 0 54147 413 48627 454730;454731;454732 359348;359349;359350 359348 3 TVQIPVYDFVSHSR Unmodified 1646.8417 0.84165545 4277 Q9BZX2 UCK2 Uridine-cytidine kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 1 2 2 2 2 2 2 2 2 2 2 2 81.013 81.093 2;3 3.4464E-16 93748 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 118.48 102.59 906950000 0 0 0 24032000 31168000 97139000 45043000 75235000 67969000 85155000 81184000 111540000 64384000 56586000 167510000 54148 4277 48628 454733;454734;454735;454736;454737;454738;454739;454740;454741;454742;454743;454744;454745;454746;454747;454748;454749;454750;454751;454752;454753;454754;454755 359351;359352;359353;359354;359355;359356;359357;359358;359359;359360;359361;359362;359363;359364;359365;359366 359360 16 TVQIPVYDFVSHSRK Unmodified 1774.9366 0.93661847 4277 Q9BZX2 UCK2 Uridine-cytidine kinase 2 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 2 2 2 2 2 2 2 2 2 2 75.793 75.919 3;4 0.00012703 86969 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.469 52.412 409160000 0 0 0 1900100 0 48986000 12485000 38454000 36958000 23493000 21143000 34443000 25103000 21362000 144840000 54149 4277 48629 454756;454757;454758;454759;454760;454761;454762;454763;454764;454765;454766;454767;454768;454769;454770;454771;454772;454773;454774;454775;454776 359367;359368;359369;359370;359371;359372;359373;359374;359375;359376;359377;359378;359379;359380;359381;359382;359383;359384;359385 359373 18 TVQLTSSELESTLETLK Unmodified 1877.9834 0.98335347 1464 P42704 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 4.43 3.54 4 1 2 3 2 1 1 91.574 89.041 2;3 1.5668E-62 110468 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 203.87 182.09 359590000 0 347540000 3474200 0 0 0 0 0 0 2862200 0 0 0 0 5710800 54150 1464 48630 454777;454778;454779;454780;454781;454782;454783 359386;359387;359388;359389;359390;359391;359392 359387 7 TVQPTQSPYPTQLFR Unmodified 1761.905 0.90498399 1322 P32519 ELF1 ETS-related transcription factor Elf-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.86 76.92 2 0.00046973 89160 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 64.199 50.771 89931000 0 0 0 3959900 4914900 6778100 6478300 6834200 5822600 9064800 7862900 9136100 6487500 8703900 13888000 54151 1322 48631 454784;454785;454786;454787;454788;454789;454790;454791;454792;454793;454794;454795 359393;359394;359395;359396;359397;359398;359399;359400;359401;359402;359403;359404;359405 359401 13 TVQPVAMGPDGLPVDASSVSNNYIQTLGR Oxidation (M) 3001.4815 0.48149955 426 O60716 CTNND1 Catenin delta-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 86.356 86.452 3 1.5628E-51 100184 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 100.41 88.555 72934000 0 0 0 0 3874600 0 0 6717200 0 19185000 11385000 11084000 0 6083600 14606000 54152 426 48632 454796;454797;454798;454799;454800;454801;454802 359406;359407;359408;359409;359410;359411;359412;359413 359406 542 8 TVQPVAMGPDGLPVDASSVSNNYIQTLGR Unmodified 2985.4866 0.48658493 426 O60716 CTNND1 Catenin delta-1 yes yes 0 0 0 By MS/MS 10 0 1 1 89.331 89.475 3 6.046E-15 103545 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.402 46.499 3719900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3719900 54153 426 48632 454803 359414 359414 1 TVQQVNQEK Unmodified 1072.5513 0.55128709 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 2 1 1 1 1 1 1 1 1 7.2283 7.3455 2 0.0028096 5347 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 136.75 61.643 77700000 0 0 0 6762700 6190400 2972000 5857600 8751800 6682100 6473700 12484000 7171900 0 4808500 9545600 54154 3676 48633 454804;454805;454806;454807;454808;454809;454810;454811;454812;454813;454814;454815 359415;359416;359417;359418;359419;359420;359421;359422;359423;359424;359425;359426 359418 12 TVQSLEIDLDSMR Oxidation (M) 1521.7345 0.73447277 814 P05783;CON__H-INV:HIT000015463 KRT18 Keratin, type I cytoskeletal 18 yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 2 2 1 2 1 2 2 2 1 1 2 1 71.593 71.628 2;3 3.0817E-52 82876 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 184.24 170.65 1404200000 0 0 0 45853000 112650000 119080000 107600000 69828000 117620000 187410000 196350000 144220000 80666000 116870000 106010000 54155 814 48634 454816;454817;454818;454819;454820;454821;454822;454823;454824;454825;454826;454827;454828;454829;454830;454831;454832;454833;454834 359427;359428;359429;359430;359431;359432;359433;359434;359435;359436;359437;359438;359439;359440;359441;359442;359443;359444;359445;359446;359447;359448;359449;359450;359451;359452;359453 359446 981 21 TVQSLEIDLDSMR Unmodified 1505.7396 0.73955814 814 P05783;CON__H-INV:HIT000015463 KRT18 Keratin, type I cytoskeletal 18 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 2 2 2 1 1 2 2 2 2 2 2 81.138 81.209 2;3 3.3937E-75 93552 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 193.87 137.44 561980000 0 0 0 7906300 31593000 41052000 22984000 29677000 38890000 65885000 51005000 54051000 25638000 38672000 154630000 54156 814 48634 454835;454836;454837;454838;454839;454840;454841;454842;454843;454844;454845;454846;454847;454848;454849;454850;454851;454852;454853;454854;454855 359454;359455;359456;359457;359458;359459;359460;359461;359462;359463;359464;359465;359466;359467;359468;359469;359470;359471;359472;359473 359457 18 TVQSNSPISALAPTGK Unmodified 1569.8362 0.83623572 638 O95292 VAPB Vesicle-associated membrane protein-associated protein B/C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 63.287 63.473 2 0.0015842 72653 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 61.375 48.419 47338000 0 0 0 0 3177100 0 2734600 5141200 0 6233300 4658600 9356900 6681400 4261600 5093300 54157 638 48635 454856;454857;454858;454859;454860;454861;454862;454863;454864;454865 359474;359475;359476;359477;359478;359479;359480;359481;359482 359478 9 TVQSPNSSVPSPGLAGPVTMTSVHPPIR Oxidation (M) 2828.4491 0.44907721 261 O15164 TRIM24 Transcription intermediary factor 1-alpha yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 74.684 74.827 3 1.403E-25 86144 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 73.805 70.978 38746000 0 0 0 0 0 9648700 4652800 0 0 8588000 0 0 0 5601600 10255000 54158 261 48636 454866;454867;454868;454869;454870 359483;359484;359485;359486;359487 359483 351 5 TVQTDHNAVQR Unmodified 1267.6269 0.62691165 362 O43747 AP1G1 AP-1 complex subunit gamma-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching 10 0 9 1 1 2 1 1 1 1 1 7.6506 7.7313 2;3 0.00067214 5909 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 63.408 47.652 39533000 0 0 0 1126000 1349900 20345000 0 360610 2197500 5794200 0 2772200 0 0 5587200 54159 362 48637 454871;454872;454873;454874;454875;454876;454877;454878;454879 359488;359489 359488 2 TVQTLGSLSK Unmodified 1032.5815 0.58152458 2420 Q14644 RASA3 Ras GTPase-activating protein 3 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 43.473 38.513 2 0.012025 49685 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.325 23.57 62991000 0 62991000 0 0 0 0 0 0 0 0 0 0 0 0 0 54160 2420 48638 454880;454881 359490 359490 1 TVQVEQSK Unmodified 917.48181 0.48181054 2596 Q16181 SEPT7 Septin-7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 9.0345 6.7432 2 0.011975 10358 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.59 66.742 25514000 11371000 12345000 0 0 0 0 0 1798000 0 0 0 0 0 0 0 54161 2596 48639 454882;454883;454884 359491;359492 359491 2 TVQVSATEDGNVTK Unmodified 1447.7155 0.71545188 400 O60443 DFNA5 Non-syndromic hearing impairment protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.43 2.06 1 13 1 2 1 1 1 1 1 1 1 1 1 1 1 31.285 30.854 2 2.4888E-26 33308 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 151.98 120.22 91588000 7307100 0 0 973400 3515900 11909000 6689900 0 4927000 11763000 0 14383000 5468100 9831200 14820000 54162 400 48640 454885;454886;454887;454888;454889;454890;454891;454892;454893;454894;454895;454896;454897;454898 359493;359494;359495;359496;359497;359498;359499;359500;359501;359502;359503;359504;359505 359503 13 TVQYQNELHK Unmodified 1258.6306 0.63060004 4985 Q9UL26 RAB22A Ras-related protein Rab-22A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 2 1 2 2 2 2 2 2 2 2 2 25.984 26.213 2;3 0.002755 27891 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 71.03 54.807 227150000 0 0 0 11776000 15378000 13216000 15654000 17511000 18322000 21627000 30365000 26373000 17474000 16691000 22762000 54163 4985 48641 454899;454900;454901;454902;454903;454904;454905;454906;454907;454908;454909;454910;454911;454912;454913;454914;454915;454916;454917;454918;454919;454920 359506;359507;359508;359509;359510;359511;359512;359513;359514;359515;359516;359517 359507 10 TVRPTSAPDVTK Unmodified 1270.6881 0.68811492 4363 Q9H2D6 TRIOBP TRIO and F-actin-binding protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 6.44 3.98 4 5 2 2 1 1 1 1 1 24.664 22.969 2;3 5.9213E-05 32731 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 111.27 61.847 275920000 191500000 0 23197000 0 0 8941700 0 0 0 12958000 0 19417000 0 8888700 11014000 54164 4363 48642 454921;454922;454923;454924;454925;454926;454927;454928;454929 359518;359519;359520;359521;359522;359523 359521 5 TVRVDPDSQQNHSEIK Unmodified 1851.9075 0.90750318 4233 Q9BXS6 NUSAP1 Nucleolar and spindle-associated protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 23.198 23.153 3 8.2188E-08 23397 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.133 58.642 81755000 0 0 15201000 3800600 3869100 3802500 3175500 3500700 3577900 6662500 6620400 10399000 7888200 5542000 7715700 54165 4233 48643 454930;454931;454932;454933;454934;454935;454936;454937;454938;454939;454940;454941;454942 359524;359525;359526;359527;359528;359529;359530;359531;359532;359533;359534;359535;359536 359528 13 TVSAAAAEK Unmodified 846.4447 0.44469675 3225 Q8IVD9 NUDCD3 NudC domain-containing protein 3 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 9.5437 6.2351 2 0.028108 8942 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.224 23.502 68004000 0 68004000 0 0 0 0 0 0 0 0 0 0 0 0 0 54166 3225 48644 454943;454944 359537 359537 1 TVSALGLDPSGAR Unmodified 1242.6568 0.65681479 4693 Q9NW82 WDR70 WD repeat-containing protein 70 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 56.739 56.863 2 1.0797E-12 64860 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 129.7 94.478 270760000 0 0 0 19555000 14517000 16937000 19903000 17436000 15937000 23381000 37809000 27765000 19207000 19562000 38748000 54167 4693 48645 454945;454946;454947;454948;454949;454950;454951;454952;454953;454954;454955;454956;454957 359538;359539;359540;359541;359542;359543;359544;359545;359546;359547;359548;359549;359550;359551 359549 14 TVSDGLHHPSQLHSK Unmodified 1641.8223 0.82231699 4350 Q9H1H9 KIF13A Kinesin-like protein KIF13A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.2 3.92 3 2 1 1 1 1 1 20.508 18.332 3;4 0.00097658 15799 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.03 40.749 139720000 107490000 17569000 3986100 0 0 0 0 0 0 0 0 5434200 0 0 5240400 54168 4350 48646 454958;454959;454960;454961;454962 359552;359553;359554 359552 3 TVSDLIDQK Unmodified 1017.5342 0.53424004 5084 Q9Y262 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.56 3 2 1 13 2 1 1 2 1 1 1 1 1 1 1 1 1 1 44.167 43.375 2 0.0030095 49081 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 126.41 74.625 1267600000 0 834700000 4651900 28146000 32773000 40255000 19748000 26750000 14238000 26247000 45357000 60700000 31843000 31777000 70445000 54169 5084 48647 454963;454964;454965;454966;454967;454968;454969;454970;454971;454972;454973;454974;454975;454976;454977;454978 359555;359556;359557;359558;359559;359560;359561;359562;359563;359564;359565;359566;359567;359568;359569;359570;359571;359572 359555 15 TVSEVSEQPK Unmodified 1102.5506 0.55061839 4968 Q9UKJ3 GPATCH8 G patch domain-containing protein 8 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.513 15.682 2 0.0018532 14698 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 96.367 66.112 187150000 0 0 0 4610500 8528600 7107400 11673000 9874400 6830200 14626000 24151000 22368000 24824000 22852000 29704000 54170 4968 48648 454979;454980;454981;454982;454983;454984;454985;454986;454987;454988;454989;454990 359573;359574;359575;359576;359577;359578;359579;359580;359581;359582;359583;359584 359576 12 TVSFEALPIMR Oxidation (M) 1278.6642 0.66420836 251 O15084 ANKRD28 Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 77.883 77.888 2 0.0035526 90084 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 59.153 43.893 40535000 0 0 0 3166400 3925900 0 4419100 4411700 4648000 7468800 0 0 5985200 6510200 0 54171 251 48649 454991;454992;454993;454994;454995;454996;454997;454998 359585;359586;359587;359588 359588 338 4 TVSFEALPIMR Unmodified 1262.6693 0.66929373 251 O15084 ANKRD28 Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A yes yes 0 0 0 By MS/MS 10 0 1 1 85.462 85.63 2 0.011554 99017 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.423 37.616 5121800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5121800 54172 251 48649 454999 359589 359589 1 TVSFSAIEVVPAPEPPPATPPQAK Unmodified 2429.2842 0.28422694 245 O15047 SETD1A Histone-lysine N-methyltransferase SETD1A yes yes 0 0 0 By MS/MS 2 0 1 1 90.614 85.718 2 0.046184 106571 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 42.958 31.165 19337000 0 19337000 0 0 0 0 0 0 0 0 0 0 0 0 0 54173 245 48650 455000 359590 359590 1 TVSFSSMPTEK Oxidation (M) 1228.5646 0.56455389 5056 Q9UPR0 PLCL2 Inactive phospholipase C-like protein 2 yes yes 0 1 0 By MS/MS 2 0 1 1 36.53 31.683 2 0.035018 41387 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 49.444 25.651 12505000 0 12505000 0 0 0 0 0 0 0 0 0 0 0 0 0 54174 5056 48651 455001 359591 359591 1 TVSGPGTPEPRPATPGASSVEQLRK Unmodified 2518.314 0.31396394 4387 Q9H3U1 UNC45A Protein unc-45 homolog A yes yes 0 0 2 By MS/MS 2 0 1 1 58.225 50.019 4 4.2579E-12 68034 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.237 50.777 76715000 76715000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54175 4387 48652 455002 359592;359593 359593 2 TVSGVNGPLVILDHVK Unmodified 1646.9356 0.93555583 1121 P21281 ATP6V1B2 V-type proton ATPase subunit B, brain isoform yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 4 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84.712 83.285 3 0.00010318 106714 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.646 56.614 250700000 128920000 44202000 5048000 1280200 1448800 6483700 2201000 3123500 2791300 4932900 6093300 4101400 4939700 5365800 29774000 54176 1121 48653 455003;455004;455005;455006;455007;455008;455009;455010;455011;455012;455013;455014;455015;455016;455017;455018 359594;359595;359596;359597;359598;359599;359600;359601;359602;359603;359604 359596 11 TVSHEAEVHAESLQQK Unmodified 1791.8751 0.87514042 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.5 3.01 1 1 8 1 1 1 1 1 1 1 1 1 1 28.578 27.963 3 5.4544E-15 30239 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 100.18 91.181 139090000 0 4472200 16260000 5794300 5694100 13162000 0 0 0 15182000 0 29499000 12766000 13494000 22765000 54177 2446 48654 455019;455020;455021;455022;455023;455024;455025;455026;455027;455028 359605;359606;359607;359608;359609 359608 3 TVSHLYQESISK Unmodified 1390.7092 0.70924429 4288 Q9C0D5 TANC1 Protein TANC1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.65 3.65 5 12 1 2 2 1 1 1 1 1 1 1 1 1 1 1 1 37.087 35.798 2;3 3.1282E-14 48343 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 139.31 115.32 201440000 22170000 43674000 21090000 5614800 8892900 9320200 11362000 6305600 10461000 11716000 9510400 10829000 7572200 7420700 15503000 54178 4288 48655 455029;455030;455031;455032;455033;455034;455035;455036;455037;455038;455039;455040;455041;455042;455043;455044;455045 359610;359611;359612;359613;359614;359615;359616;359617;359618;359619;359620;359621;359622;359623;359624 359615 14 TVSLGAGAK Unmodified 802.45487 0.45486751 830 P06748 NPM1 Nucleophosmin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 20.548 19.986 2 0.0033806 20869 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 104.75 50.176 5664500000 0 799860000 21584000 232150000 219860000 230100000 274370000 233880000 243320000 442870000 616750000 611100000 431050000 479730000 827870000 54179 830 48656 455046;455047;455048;455049;455050;455051;455052;455053;455054;455055;455056;455057;455058;455059;455060 359625;359626;359627;359628;359629;359630;359631;359632;359633;359634;359635;359636;359637;359638;359639;359640;359641;359642;359643 359629 16 TVSLLDENNVSSYLSK Unmodified 1767.8891 0.88905915 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 3 1 1 1 1 1 1 1 1 1 1 1 1 1 82.428 81.78 2 1.1371E-148 94169 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 213.63 197.74 5044700000 0 4388700000 45716000 15353000 29887000 40426000 23651000 35216000 20973000 90331000 66464000 71695000 29867000 60525000 125910000 54180 1986 48657 455061;455062;455063;455064;455065;455066;455067;455068;455069;455070;455071;455072;455073;455074;455075;455076 359644;359645;359646;359647;359648;359649;359650;359651;359652;359653;359654;359655;359656;359657;359658;359659;359660 359656 17 TVSLPLSSPNIK Unmodified 1254.7184 0.71835242 3250 Q8IWZ3 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.084 73.15 2 3.1709E-06 84210 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 111.65 86.266 255990000 0 0 0 12671000 15660000 22070000 18210000 15574000 21936000 26806000 27633000 29097000 20487000 19398000 26445000 54181 3250 48658 455077;455078;455079;455080;455081;455082;455083;455084;455085;455086;455087;455088 359661;359662;359663;359664;359665;359666;359667;359668;359669;359670;359671 359666 9 TVSLRSEETVSGLK Unmodified 1504.8097 0.80968662 2179 Q10570 CPSF1 Cleavage and polyadenylation specificity factor subunit 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 54.481 48.43 3 0.01169 66212 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 44.968 31.85 124440000 115170000 0 9275000 0 0 0 0 0 0 0 0 0 0 0 0 54182 2179 48659 455089;455090 359672;359673 359672 1 TVSLSQMLR Unmodified 1033.559 0.559015 3239 Q8IWE2 FAM114A1 Protein NOXP20 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.554 72.623 2 0.0035332 83523 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 89.752 63.858 149580000 0 0 0 8178400 7329000 10352000 8084400 9374500 7565900 14745000 16763000 16436000 10873000 11388000 28496000 54183 3239 48660 455091;455092;455093;455094;455095;455096;455097;455098;455099;455100;455101;455102 359674;359675;359676;359677;359678;359679;359680;359681;359682;359683;359684 359679 11 TVSLTPSPTTQVETPDLVDHDNTSPLFR Unmodified 3066.5146 0.51457382 2113 Q05209 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 84.267 84.407 3 3.3106E-113 97526 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 145.2 138.69 35961000 0 0 0 0 0 0 0 0 0 8307300 0 10504000 0 0 17149000 54184 2113 48661 455103;455104;455105 359685;359686 359685 2 TVSPALISR Unmodified 942.54983 0.54983053 3170 Q86VP6 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.501 45.67 2 0.0098768 51120 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 65.465 16.962 486090000 0 0 0 18200000 14091000 79046000 23047000 17577000 16312000 47161000 53623000 48242000 33128000 48551000 87109000 54185 3170 48662 455106;455107;455108;455109;455110;455111;455112;455113;455114;455115;455116;455117 359687;359688;359689;359690;359691;359692;359693;359694;359695;359696 359692 7 TVSPALISRFK Unmodified 1217.7132 0.71320746 3170 Q86VP6 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 75.752 67.622 3 0.0062267 89162 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.452 46.02 20606000 20606000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54186 3170 48663 455118 359697 359697 1 TVSPDRLELEAAQK Unmodified 1555.8206 0.82058566 2457 Q14974 KPNB1 Importin subunit beta-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.88 3.47 7 2 24 3 4 2 2 2 2 2 2 2 2 2 2 2 2 2 51.306 50.038 2;3 7.3579E-28 63028 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 118.48 118.48 5360700000 185140000 1405100000 1365100000 119630000 113310000 283370000 151420000 125230000 119900000 198910000 246920000 246620000 188800000 191370000 419950000 54187 2457 48664 455119;455120;455121;455122;455123;455124;455125;455126;455127;455128;455129;455130;455131;455132;455133;455134;455135;455136;455137;455138;455139;455140;455141;455142;455143;455144;455145;455146;455147;455148;455149;455150;455151 359698;359699;359700;359701;359702;359703;359704;359705;359706;359707;359708;359709;359710;359711;359712;359713;359714;359715;359716;359717;359718;359719;359720;359721;359722;359723;359724;359725;359726;359727;359728;359729;359730;359731;359732;359733;359734;359735;359736;359737;359738;359739;359740;359741;359742;359743 359730 42 TVSPSTIRDGPSSAPATPTK Unmodified 1969.0116 0.011633904 3893 Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 41.285 40.711 3 0.00048953 45250 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 44.771 23.833 110940000 5376700 0 0 0 5510300 9848500 10343000 0 8125300 12306000 15618000 0 11576000 8845300 23390000 54188 3893 48665 455152;455153;455154;455155;455156;455157;455158;455159;455160;455161 359744;359745;359746;359747;359748;359749;359750;359751;359752;359753;359754 359745 11 TVSQIISLQTLK Unmodified 1329.7868 0.78676633 571 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 80.182 79.6 2 0.00044749 92230 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 91.752 73.44 87297000 17634000 0 0 0 2841700 3734400 3129400 4821600 3946100 7820000 5710300 9640000 6454600 8223400 13341000 54189 571 48666 455162;455163;455164;455165;455166;455167;455168;455169;455170;455171;455172;455173 359755;359756;359757;359758;359759;359760;359761;359762;359763;359764 359756 10 TVSQNQPDVSHTSRPSPSIAVK Unmodified 2334.1928 0.19278617 4997 Q9ULJ3 ZBTB21 Zinc finger and BTB domain-containing protein 21 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.68 1.57 1 24 1 2 2 2 2 2 2 2 2 2 2 2 2 40.118 39.982 3;4 0.0046736 55407 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 36.663 29.269 384420000 43155000 0 0 14590000 20475000 26445000 26553000 20256000 21482000 40291000 36284000 47737000 26042000 26002000 35113000 54190 4997 48667 455174;455175;455176;455177;455178;455179;455180;455181;455182;455183;455184;455185;455186;455187;455188;455189;455190;455191;455192;455193;455194;455195;455196;455197;455198 359765;359766;359767;359768;359769;359770;359771;359772;359773;359774;359775;359776;359777 359771 13 TVSSEDVAEMHNILK Unmodified 1671.8138 0.81378572 1978 P78356 PIP4K2B Phosphatidylinositol 5-phosphate 4-kinase type-2 beta yes yes 0 0 0 By MS/MS 2 0 2 2 75.05 70.11 2;3 0.00032026 87802 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 111.94 94.04 157170000 0 157170000 0 0 0 0 0 0 0 0 0 0 0 0 0 54191 1978 48668 455199;455200 359778;359779 359779 1 TVSSHEVFLQR Unmodified 1301.6728 0.67279921 5254 Q9Y5X3 SNX5 Sorting nexin-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 1 1 2 2 1 2 2 2 2 1 2 39.856 40.116 2;3 0.0023678 43820 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 50.95 40.045 319720000 0 0 0 14746000 10193000 29517000 22939000 16505000 16407000 35569000 34438000 38703000 25473000 19938000 55291000 54192 5254 48669 455201;455202;455203;455204;455205;455206;455207;455208;455209;455210;455211;455212;455213;455214;455215;455216;455217;455218;455219 359780;359781;359782;359783;359784;359785;359786;359787;359788;359789;359790;359791;359792;359793 359790 10 TVSSPPTSPRPGSAATVSASTSNIIPPR Unmodified 2734.425 0.42497095 578 O76094 SRP72 Signal recognition particle subunit SRP72 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 65.149 65.305 3 9.5543E-11 74906 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 45.269 37.823 47556000 0 0 0 0 3441800 6176500 0 7582500 4931100 5074800 5954800 5928500 0 0 8466300 54193 578 48670 455220;455221;455222;455223;455224;455225;455226;455227 359794;359795;359796;359797;359798;359799;359800;359801;359802;359803 359795 10 TVSSSNGGESSSRSAEK Unmodified 1668.7551 0.75508487 3570 Q8WW12 PCNP PEST proteolytic signal-containing nuclear protein yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 5.8529 2.9576 2;3 1.3477E-225 4755 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 318.96 259.59 174980000 0 162000000 12981000 0 0 0 0 0 0 0 0 0 0 0 0 54194 3570 48671 455228;455229;455230 359804;359805;359806 359805 3 TVSTLHHVLQR Unmodified 1289.7204 0.7204181 181 O00764 PDXK Pyridoxal kinase yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 30.121 30.482 3 0.018369 31895 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 39.266 24.064 55437000 0 0 0 0 0 0 2366500 1351200 1294800 0 10687000 12634000 0 7701600 19401000 54195 181 48672 455231;455232;455233;455234;455235;455236;455237 359807;359808;359809 359809 3 TVSTSSQPEENVDR Unmodified 1547.7063 0.70634376 1462 P42684 ABL2 Abelson tyrosine-protein kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 22.207 22.317 2 1.7293E-13 22883 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 110.66 82.919 36793000 0 0 0 3592200 2853200 4269000 5086500 2675500 2888200 4595800 0 6704300 0 4128500 0 54196 1462 48673 455238;455239;455240;455241;455242;455243;455244;455245;455246;455247;455248 359810;359811;359812;359813;359814;359815;359816;359817;359818;359819 359814 10 TVSTSSQPEENVDRANDMLPK Oxidation (M) 2333.0805 0.080518105 1462 P42684 ABL2 Abelson tyrosine-protein kinase 2 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 43.502 43.598 3 4.6182E-06 48676 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 58.672 50.023 70251000 0 0 0 9049100 0 10278000 0 12257000 0 0 18556000 0 20112000 0 0 54197 1462 48674 455249;455250;455251;455252;455253 359820;359821;359822;359823;359824 359821 2294 5 TVSTSSQPEENVDRANDMLPK Unmodified 2317.0856 0.085603483 1462 P42684 ABL2 Abelson tyrosine-protein kinase 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.408 55.534 3 0.00020577 62280 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.362 41.924 81124000 0 0 0 3651500 4726400 5257700 6431400 6378300 5015900 6220400 7967000 7991600 5836700 7958700 13689000 54198 1462 48674 455254;455255;455256;455257;455258;455259;455260;455261;455262;455263;455264;455265 359825;359826;359827;359828;359829;359830;359831;359832;359833;359834;359835;359836;359837 359828 13 TVSVSEAIK Unmodified 932.51786 0.51786169 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 38.367 38.103 2 0.014807 42771 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 57.931 6.8714 113470000 0 0 0 48491000 24728000 0 0 40254000 0 0 0 0 0 0 0 54199 1029 48675 455266;455267;455268 359838 359838 1 TVSYLGLE Unmodified 880.4542 0.45419881 132 O00244 ATOX1 Copper transport protein ATOX1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 73.106 73.361 1 0.0068978 84514 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 130.77 115.13 47025000 0 0 0 0 0 0 0 0 0 0 12225000 0 0 8154300 26646000 54200 132 48676 455269;455270;455271 359839;359840;359841 359840 0 TVSYPDVSLEEQEK Unmodified 1622.7675 0.76754703 970 P12757 SKIL Ski-like protein yes yes 0 0 0 By MS/MS 10 0 1 1 61.123 61.249 2 0.0044339 69914 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 63.283 46.258 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54201 970 48677 455272 359842 359842 1 TVTAAGAENIQQK Unmodified 1329.6888 0.6888432 2647 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.512 26.712 2 5.1593E-08 28399 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 113.93 77.502 58168000 0 0 0 3802000 4222700 4848600 3890200 4530600 2947600 6352500 5785000 7072000 5305000 3937500 5474800 54202 2647 48678 455273;455274;455275;455276;455277;455278;455279;455280;455281;455282;455283;455284 359843;359844;359845;359846;359847;359848;359849;359850;359851;359852;359853;359854 359848 12 TVTAEVQPQCGR Unmodified 1344.6456 0.64559818 2663 Q32P28 LEPRE1 Prolyl 3-hydroxylase 1 yes yes 0 0 0 By MS/MS 2 0 1 1 29.88 25.487 2 0.002156 33375 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.57 80.171 15255000 0 15255000 0 0 0 0 0 0 0 0 0 0 0 0 0 54203 2663 48679 455285 359855 359855 1 TVTAEVQPQCGRAVGFSSGTENPHGVK Unmodified 2812.3562 0.35623946 2663 Q32P28 LEPRE1 Prolyl 3-hydroxylase 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 4 2 2 56.434 50.383 3;4 2.2403E-145 68433 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 162.77 153.19 193820000 186560000 0 7259000 0 0 0 0 0 0 0 0 0 0 0 0 54204 2663 48680 455286;455287;455288;455289 359856;359857;359858 359857 3 TVTAMDVVYALK Oxidation (M) 1325.6901 0.69008876 1910 P62805 HIST1H4A Histone H4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.41 3.11 4 2 23 1 3 2 2 1 2 2 2 2 2 2 2 2 2 2 77.243 76.45 2 3.8734E-10 94457 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.48 97.306 1437700000 23155000 265380000 46115000 99680000 31097000 95249000 118910000 80894000 82764000 127180000 88138000 117360000 90346000 68366000 103080000 54205 1910 48681 455290;455291;455292;455293;455294;455295;455296;455297;455298;455299;455300;455301;455302;455303;455304;455305;455306;455307;455308;455309;455310;455311;455312;455313;455314;455315;455316;455317;455318 359859;359860;359861;359862;359863;359864;359865;359866;359867;359868;359869;359870;359871;359872;359873;359874;359875;359876;359877;359878;359879;359880;359881;359882;359883;359884;359885;359886;359887;359888;359889 359865 3085 31 TVTAMDVVYALK Unmodified 1309.6952 0.69517413 1910 P62805 HIST1H4A Histone H4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.56 3.62 4 1 11 1 3 1 1 1 1 1 1 1 1 1 1 1 1 86.776 85.472 2 1.0545E-12 107933 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 127.4 105.93 1057800000 68714000 773410000 22547000 11232000 9683800 22199000 13465000 23821000 20535000 30395000 0 28819000 11790000 21196000 0 54206 1910 48681 455319;455320;455321;455322;455323;455324;455325;455326;455327;455328;455329;455330;455331;455332;455333;455334 359890;359891;359892;359893;359894;359895;359896;359897;359898;359899;359900;359901;359902;359903;359904;359905;359906 359899 17 TVTATFGYPFR Unmodified 1258.6346 0.63462279 2614 Q16563 SYPL1 Synaptophysin-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.512 77.569 2 0.00033979 89920 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 99.802 73.418 193880000 0 0 0 28460000 11788000 12064000 10029000 16388000 9426900 15476000 17240000 29932000 16275000 9818300 16979000 54207 2614 48682 455335;455336;455337;455338;455339;455340;455341;455342;455343;455344;455345;455346 359907;359908;359909;359910;359911;359912;359913 359912 7 TVTEIDEK Unmodified 933.46549 0.46549177 1844 P61289 PSME3 Proteasome activator complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By matching 2 0 3 1 1 1 20.652 16.938 2 0.01951 21988 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.794 31.353 38614000 10130000 27667000 817220 0 0 0 0 0 0 0 0 0 0 0 0 54208 1844 48683 455347;455348;455349 359914;359915 359914 2 TVTIPSGSTLAFR Unmodified 1348.7351 0.73506511 1798 P57764 GSDMD Gasdermin-D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.204 76.247 2 0.00062414 88348 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 81.338 24.775 51226000 0 0 0 2674700 3104000 4356200 4339800 5281200 0 0 6877100 6122400 5486400 4481000 8502700 54209 1798 48684 455350;455351;455352;455353;455354;455355;455356;455357;455358;455359;455360 359916;359917;359918;359919;359920;359921;359922;359923;359924;359925 359923 10 TVTIPTQPYQDIVTALK Unmodified 1887.0353 0.035329459 3107 Q7Z5K2 WAPAL Wings apart-like protein homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 90.395 90.549 2 0.0035983 105066 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 46.592 32.913 8238700 0 0 0 0 0 0 0 0 0 2296100 2015700 0 0 0 3926900 54210 3107 48685 455361;455362;455363 359926;359927 359926 2 TVTISQVSDNK Unmodified 1190.6143 0.61428128 3754 Q96B97 SH3KBP1 SH3 domain-containing kinase-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 33.674 33.213 2 3.7368E-09 41800 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 158.76 95.191 57327000 0 27784000 0 0 2536500 0 2477400 0 0 4161700 6198000 6291200 0 0 7878500 54211 3754 48686 455364;455365;455366;455367;455368;455369;455370;455371;455372 359928;359929;359930;359931;359932;359933;359934;359935;359936;359937 359930 10 TVTIVVR Unmodified 786.49634 0.49633839 1642 P50991 CCT4 T-complex protein 1 subunit delta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 41.86 42.101 2 0.015408 45602 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 118.01 38.557 785810000 0 0 0 0 28518000 85509000 45454000 39987000 43338000 79556000 73297000 121930000 58536000 70598000 139090000 54212 1642 48687 455373;455374;455375;455376;455377;455378;455379;455380;455381;455382;455383 359938;359939;359940;359941;359942;359943;359944;359945;359946;359947;359948 359941 10 TVTIVVRGSNK Unmodified 1172.6877 0.68772099 1642 P50991 CCT4 T-complex protein 1 subunit delta yes yes 0 0 1 By MS/MS 2 0 1 1 36.546 30.117 3 0.041282 43111 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.043 43.83 14721000 14721000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54213 1642 48688 455384 359949 359949 0 TVTLGGDVFDPHGTLSGGAR Unmodified 1955.9701 0.97010344 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.5 75.597 3 4.1033E-28 87148 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 85.974 76.568 286210000 0 0 0 5728000 0 29795000 14047000 18230000 12780000 31701000 31533000 35031000 18732000 29259000 59377000 54214 643 48689 455385;455386;455387;455388;455389;455390;455391;455392;455393;455394;455395;455396 359950;359951;359952;359953;359954;359955;359956;359957;359958;359959;359960;359961 359951 12 TVTLPENEDELESTNR Unmodified 1845.8592 0.85921559 1291 P30876 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 0 0 0 By MS/MS 10 0 1 1 59.761 59.788 2 0.0045832 68251 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 58.676 43.304 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54215 1291 48690 455397 359962 359962 1 TVTLPENEDELESTNRR Unmodified 2001.9603 0.96032661 1291 P30876 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 53.437 53.203 3 2.9626E-08 60537 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 60.474 51.532 32351000 0 0 0 8938600 7023000 0 8465600 7923400 0 0 0 0 0 0 0 54216 1291 48691 455398;455399;455400;455401;455402;455403;455404 359963;359964;359965;359966;359967;359968;359969 359966 7 TVTLPENEDELESTNRRYTK Unmodified 2394.1663 0.16629664 1291 P30876 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 60.063 54.022 4 9.3392E-05 72801 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.964 49.311 44383000 30336000 0 14048000 0 0 0 0 0 0 0 0 0 0 0 0 54217 1291 48692 455405;455406 359970;359971 359970 2 TVTLQGNLDPCALYASEEEIGQLVK Unmodified 2747.3688 0.3687612 816 P06132 UROD Uroporphyrinogen decarboxylase yes yes 0 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 3 1 97.746 93.933 2;3 7.6808E-56 115697 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 177.04 165.52 345560000 0 342370000 3191500 0 0 0 0 0 0 0 0 0 0 0 0 54218 816 48693 455407;455408;455409;455410 359972;359973;359974;359975 359973 4 TVTNAVVTVPAYFNDSQR Unmodified 1980.9905 0.99050453 934 P11142 HSPA8 Heat shock cognate 71 kDa protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.81 3.5 7 2 23 2 5 2 2 2 2 2 2 2 2 2 2 2 2 1 80.128 79.673 2;3 7.6865E-161 92169 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 294.52 255.73 8498400000 1560900 623460000 486000 259740000 398500000 511130000 365060000 443220000 400750000 797330000 1021400000 1066500000 594430000 835790000 1179100000 54219 934 48694 455411;455412;455413;455414;455415;455416;455417;455418;455419;455420;455421;455422;455423;455424;455425;455426;455427;455428;455429;455430;455431;455432;455433;455434;455435;455436;455437;455438;455439;455440;455441;455442 359976;359977;359978;359979;359980;359981;359982;359983;359984;359985;359986;359987;359988;359989;359990;359991;359992;359993;359994;359995;359996;359997 359997 18 TVTNAVVTVPAYFNDSQRQATK Unmodified 2409.2288 0.22883732 934 P11142 HSPA8 Heat shock cognate 71 kDa protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 3 2 1 79.759 73.908 3 7.7858E-26 95104 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 109.75 101.47 2875700000 1570300000 1172800000 132610000 0 0 0 0 0 0 0 0 0 0 0 0 54220 934 48695 455443;455444;455445;455446;455447;455448 359998;359999;360000;360001;360002;360003;360004;360005 360002 7 TVTPAMVEGIYK Unmodified 1307.6795 0.67952407 4801 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 73.074 73.086 2 0.0035233 83658 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.499 29.19 16877000 0 0 0 2629500 0 0 3147700 0 0 0 0 0 4052100 0 7047400 54221 4801 48696 455449;455450;455451;455452;455453;455454 360006;360007;360008;360009;360010;360011 360008 6 TVTPAYNR Unmodified 920.47158 0.4715802 2136 Q07157 TJP1 Tight junction protein ZO-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 7 1 1 1 1 1 1 1 19.391 19.511 2 0.029462 19775 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 56.122 12.998 53360000 0 0 0 6732100 5229200 7776300 5603500 0 0 14720000 6000000 7299600 0 0 0 54222 2136 48697 455455;455456;455457;455458;455459;455460;455461 360012 360012 1 TVTQEDVQK Unmodified 1046.5244 0.52440364 18 A4UGR9 XIRP2 Xin actin-binding repeat-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 25.62 25.795 2 0.009348 27136 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 66.993 0.56389 80056000 0 0 0 0 0 0 22105000 21885000 0 0 0 0 36065000 0 0 54223 18 48698 455462;455463;455464 360013;360014;360015 360015 3 TVTQVVPAEGQENGQREEEEEEK Unmodified 2614.1994 0.19944727 4976 Q9UKV3 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 37.834 38.054 3 8.3932E-09 41220 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.165 55.805 35082000 0 0 0 2930100 0 6174000 4960600 0 0 3507900 0 5243800 0 4627600 7637900 54224 4976 48699 455465;455466;455467;455468;455469;455470;455471;455472 360016;360017;360018;360019;360020;360021 360019 6 TVTSATIVYHLAR Unmodified 1430.7882 0.78816332 3683 Q92900 UPF1 Regulator of nonsense transcripts 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 64.605 64.877 3 0.00077692 73501 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 52.555 46.606 32613000 0 0 0 0 0 3013300 0 0 0 2845300 4144900 6147100 0 2695100 13767000 54225 3683 48700 455473;455474;455475;455476;455477;455478 360022;360023;360024;360025;360026;360027 360027 6 TVTSFYNQSAIDAAAEK Unmodified 1814.8687 0.86865806 223 O14874 BCKDK [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 73.045 67.5 2 5.6059E-37 85393 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 147.18 116.63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54226 223 48701 455479 360028 360028 1 TVTTASMITTK Unmodified 1152.606 0.60602477 3755 Q96BD5 PHF21A PHD finger protein 21A yes yes 0 0 0 By MS/MS 2 0 2 2 44.81 39.489 2 0.041413 51401 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 57.348 33.773 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54227 3755 48702 455480;455481 360029;360030 360029 2 TVTTASMITTK Oxidation (M) 1168.6009 0.6009394 3755 Q96BD5 PHF21A PHD finger protein 21A yes yes 0 1 0 By matching By MS/MS By matching 10 0 4 1 2 1 24.08 24.63 2 0.016229 25643 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 40.994 14.032 9549600 0 0 0 0 0 0 0 0 0 0 1596700 5286300 2666600 0 0 54228 3755 48702 455482;455483;455484;455485 360031 360031 5325 1 TVTVTRPTGVSFK Unmodified 1391.7773 0.77726428 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 2 1 2 1 1 1 1 1 49.584 49.689 2;3 0.0020197 55840 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 55.899 26.095 591710000 0 0 0 36042000 38814000 14439000 79191000 9502700 68113000 77009000 69729000 0 51177000 58109000 89586000 54229 19 48703 455486;455487;455488;455489;455490;455491;455492;455493;455494;455495;455496;455497;455498 360032;360033;360034;360035;360036 360034 5 TVVAEYAIALAQK Unmodified 1375.7711 0.77111627 2540 Q15477 SKIV2L Helicase SKI2W yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 86.01 80.141 2;3 0.002072 102655 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.617 74.18 101690000 79067000 15969000 6655500 0 0 0 0 0 0 0 0 0 0 0 0 54230 2540 48704 455499;455500;455501;455502 360037;360038;360039;360040 360039 3 TVVAGSSDAAQK Unmodified 1132.5724 0.57241646 702 O95865 DDAH2 N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 yes yes 0 0 0 By MS/MS 10 0 1 1 9.8511 10.291 2 0.037166 8673 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 35.511 9.1272 1708400 0 0 0 0 0 0 0 0 0 0 1708400 0 0 0 0 54231 702 48705 455503 360041 360041 1 TVVATSTPPPLINAQQASPGCISPSLPPPPLK Unmodified 3234.7322 0.73223493 3657 Q92766 RREB1 Ras-responsive element-binding protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 88.667 88.811 3 0.0031652 102846 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 21.169 18.719 3488400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3488400 54232 3657 48706 455504 360042 360042 1 TVVDLSEVYKPR Unmodified 1404.7613 0.76127986 2712 Q567U6 CCDC93 Coiled-coil domain-containing protein 93 yes yes 0 0 1 By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 66.947 67.087 3 0.0031103 76277 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.951 43.548 24171000 0 0 0 0 773500 2763000 3305200 0 0 3877400 4005800 2786500 0 0 6659600 54233 2712 48707 455505;455506;455507;455508;455509;455510;455511 360043;360044 360044 2 TVVDLVSADLEEVAQK Unmodified 1714.8989 0.89889556 537 O75771 RAD51D DNA repair protein RAD51 homolog 4 yes yes 0 0 0 By MS/MS 2 0 1 1 95.851 91.029 3 0.001725 112856 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 55.755 47.578 12234000 0 12234000 0 0 0 0 0 0 0 0 0 0 0 0 0 54234 537 48708 455512 360045 360045 1 TVVEALFQR Unmodified 1061.5869 0.58694431 1797 P57740 NUP107 Nuclear pore complex protein Nup107 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 74.417 74.386 2 0.0049392 85527 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 85.212 67.176 67448000 0 0 0 5557000 7055600 7817000 11202000 10200000 0 13872000 0 11745000 0 0 0 54235 1797 48709 455513;455514;455515;455516;455517;455518;455519;455520;455521;455522;455523 360046;360047;360048;360049;360050;360051;360052;360053;360054;360055;360056 360054 10 TVVFQQER Unmodified 1005.5243 0.52434406 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 31.264 31.549 2 0.0075386 34123 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 89.296 49.027 87829000 0 0 0 0 0 12926000 12106000 0 8138000 0 15416000 0 13366000 9464300 16412000 54236 2556 48710 455524;455525;455526;455527;455528;455529;455530 360057;360058;360059;360060;360061;360062 360060 5 TVVGVPSGK Unmodified 842.48617 0.48616764 3861 Q96GY0 ZC2HC1A Zinc finger C2HC domain-containing protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 27.998 28.4 2 0.030461 30483 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 48.157 25.421 41484000 0 0 0 0 0 0 0 0 3707100 6911200 7053700 7262800 5483200 3588200 7478000 54237 3861 48711 455531;455532;455533;455534;455535;455536;455537 360063 360063 1 TVVLGDLLIDDK Unmodified 1299.7286 0.72858275 3487 Q8TCD5 NT5C 5'(3')-deoxyribonucleotidase, cytosolic type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 90.18 85.585 2 0.00064516 108656 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 91.855 56.631 19120000 12508000 3137000 3475500 0 0 0 0 0 0 0 0 0 0 0 0 54238 3487 48712 455538;455539;455540;455541 360064;360065;360066;360067 360066 4 TVVLPPIVASR Unmodified 1150.7074 0.7073938 464 O75152 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.795 78.853 2 0.0070389 91108 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 67.113 42.958 490500000 0 0 0 18171000 27260000 35099000 36003000 39501000 29741000 48380000 53677000 53771000 42922000 46235000 59739000 54239 464 48713 455542;455543;455544;455545;455546;455547;455548;455549;455550;455551;455552;455553 360068;360069;360070;360071;360072;360073;360074;360075;360076;360077;360078;360079;360080 360069 13 TVVLPPIVASRGQSEEPAGK Unmodified 2034.111 0.11095402 464 O75152 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes yes 0 0 1 By MS/MS 2 0 1 1 79.824 71.693 3 0.0024821 94085 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 26.593 20.75 14389000 14389000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54240 464 48714 455554 360081 360081 1 TVVNRDVPNETLQVEEDDRPELPWWK Unmodified 3163.5574 0.55744168 649 O95373 IPO7 Importin-7 yes yes 0 0 2 By MS/MS 2 0 1 1 90.028 81.898 4 7.6917E-31 106336 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 100.88 93.109 41873000 41873000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54241 649 48715 455555 360082 360082 1 TVVPCCSGPK Unmodified 1103.5104 0.51035025 1126 P21399 ACO1 Cytoplasmic aconitate hydratase yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 29.262 24.278 2 0.017068 33942 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.692 39.73 333930000 16376000 317560000 0 0 0 0 0 0 0 0 0 0 0 0 0 54242 1126 48716 455556;455557 360083;360084 360084 2 TVVQSCGHSLETK Unmodified 1444.698 0.69802768 3246 Q8IWV7 UBR1 E3 ubiquitin-protein ligase UBR1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 27.074 22.812 3 0.0021887 28860 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 63.16 44.06 164940000 21109000 128490000 15345000 0 0 0 0 0 0 0 0 0 0 0 0 54243 3246 48717 455558;455559;455560;455561 360085;360086;360087;360088;360089 360089 3 TVVSGLVNHVPLEQMQNR Unmodified 2020.0524 0.052393282 2205 Q12904 AIMP1 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1;Endothelial monocyte-activating polypeptide 2 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 76.763 76.956 3 0.0087409 88368 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 30.767 20.602 26705000 0 0 0 0 0 0 0 0 0 1720700 0 0 0 0 24985000 54244 2205 48718 455562;455563 360090 360090 1 TVVSGLVQFVPK Unmodified 1272.7442 0.74417324 1740 P54577 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 84.54 84.605 2 0.012301 97584 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.751 42.922 179810000 0 0 0 2820800 3389200 12207000 5226100 6913000 7429200 15629000 17635000 19412000 5411200 13071000 70665000 54245 1740 48719 455564;455565;455566;455567;455568;455569;455570;455571;455572;455573;455574;455575 360091;360092;360093;360094 360093 4 TVVTGIEMFHK Unmodified 1260.6536 0.65364367 1572 P49411 TUFM Elongation factor Tu, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 65.198 65.488 3 0.024536 74936 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 33.761 27.384 13055000 0 0 0 0 0 0 3624000 0 0 0 0 9431000 0 0 0 54246 1572 48720 455576;455577 360095 360095 1 TVVTGIEMFHK Oxidation (M) 1276.6486 0.64855829 1572 P49411 TUFM Elongation factor Tu, mitochondrial yes yes 0 1 0 By MS/MS 10 0 1 1 50.299 51.022 3 0.015472 57177 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 45.653 33.439 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54247 1572 48720 455578 360096 360096 2524 1 TVVVEAGK Unmodified 801.45962 0.45961853 592 O94842 TOX4 TOX high mobility group box family member 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 17.029 16.905 2 0.013245 17455 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 72.789 33.971 345140000 0 35331000 0 20131000 14369000 22614000 18999000 20462000 21096000 0 36327000 36891000 32515000 36639000 49763000 54248 592 48721 455579;455580;455581;455582;455583;455584;455585;455586;455587;455588;455589;455590 360097;360098;360099;360100;360101;360102;360103;360104;360105 360097 9 TVVVNCNPETVSTDFDECDK Unmodified 2327.9886 0.98859155 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching 8.4 3.2 1 4 1 1 1 1 1 70.003 68.602 2 6.7876E-23 87092 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 133.14 125.94 19079000 7257600 0 0 0 0 0 0 0 0 1154300 0 3187400 0 3060400 4419700 54249 1300 48722 455591;455592;455593;455594;455595 360106;360107;360108 360107 3 TVVYGITTGFGK Unmodified 1241.6656 0.66558856 1456 P42357 HAL Histidine ammonia-lyase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 72.661 72.363 2 2.6436E-06 83823 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 112.75 88.593 81743000 0 0 0 77364000 0 4379000 0 0 0 0 0 0 0 0 0 54250 1456 48723 455596;455597;455598;455599;455600;455601;455602;455603 360109;360110;360111;360112;360113;360114;360115;360116 360115 8 TVWDWELMNDIK Oxidation (M) 1564.7232 0.7231798 1002 P14625 HSP90B1 Endoplasmin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 3.5 2.93 4 1 1 3 2 1 87.434 84.493 2 0.0015584 104945 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.958 71.279 134160000 0 106400000 20613000 0 0 0 0 0 0 0 0 0 0 0 7145900 54251 1002 48724 455604;455605;455606;455607;455608;455609 360117;360118;360119;360120;360121;360122;360123 360117 1367 5 TVWDWELMNDIK Unmodified 1548.7283 0.72826518 1002 P14625 HSP90B1 Endoplasmin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.8 3.12 3 1 1 1 2 1 1 94.681 90.972 2 0.007769 114212 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.017 57.697 220920000 38074000 179990000 1787400 0 0 0 0 0 0 0 0 0 0 0 1061500 54252 1002 48724 455610;455611;455612;455613;455614 360124;360125;360126;360127 360127 4 TVWEISQK Unmodified 989.5182 0.51819605 1171 P23921 RRM1 Ribonucleoside-diphosphate reductase large subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 50.136 48.568 1;2 5.0562E-37 62979 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 215.09 156.41 1855200000 94506000 892680000 64341000 40727000 37230000 70708000 47755000 43865000 38811000 81442000 92523000 75268000 61789000 61930000 151610000 54253 1171 48725 455615;455616;455617;455618;455619;455620;455621;455622;455623;455624;455625;455626;455627;455628;455629;455630;455631 360128;360129;360130;360131;360132;360133;360134;360135;360136;360137;360138;360139;360140;360141;360142;360143;360144;360145;360146 360133 18 TVYCNVHK Unmodified 1019.4859 0.48585006 2262 Q13263 TRIM28 Transcription intermediary factor 1-beta yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 2 1 2 1 1 2 2 2 10.267 10.473 2 0.030584 9833 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 55.441 8.7777 114470000 0 0 0 0 0 2461600 2038200 6740400 1748800 13013000 12392000 15468000 18868000 18419000 23320000 54254 2262 48726 455632;455633;455634;455635;455636;455637;455638;455639;455640;455641;455642;455643;455644;455645;455646 360147;360148;360149;360150 360147 2 TVYFAEEVQCEGNSFHK Unmodified 2043.8996 0.89964061 1123 P21291 CSRP1 Cysteine and glycine-rich protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS 7.33 3.77 1 2 1 1 1 70.693 68.211 3 7.4331E-47 89292 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 138.05 133.05 61189000 50834000 0 0 0 0 0 0 0 0 0 0 0 0 1639700 8715300 54255 1123 48727 455647;455648;455649 360151;360152 360152 2 TVYGGGCSEMLMAHAVTQLANR 2 Oxidation (M) 2397.0875 0.087534513 1980 P78371 CCT2 T-complex protein 1 subunit beta yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 62.965 63.201 3 1.4589E-20 72101 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 86.539 85.433 198060000 0 0 0 0 0 22249000 8191600 14773000 9404900 25416000 28528000 24692000 8944500 12490000 43370000 54256 1980 48728 455650;455651;455652;455653;455654;455655;455656;455657;455658;455659 360153;360154;360155;360156;360157;360158;360159;360160;360161;360162;360163;360164;360165 360165 3197;3198 13 TVYGGGCSEMLMAHAVTQLANR Oxidation (M) 2381.0926 0.092619891 1980 P78371 CCT2 T-complex protein 1 subunit beta yes yes 0 1 0 By matching By matching By MS/MS 10 0 3 1 1 1 79.732 79.848 3 9.2544E-34 91918 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.543 95.352 23184000 0 0 0 0 0 1723400 0 0 0 0 0 0 0 1371900 20089000 54257 1980 48728 455660;455661;455662 360166 360166 3197;3198 1 TVYNLLSDRDLK Unmodified 1435.7671 0.76709352 4622 Q9NS91 RAD18 E3 ubiquitin-protein ligase RAD18 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 67.51 67.662 3 0.0014317 76741 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.966 39.711 68783000 0 0 0 0 2825900 8396600 4431600 5701300 5050500 7188300 8767300 5698000 0 6618600 14105000 54258 4622 48729 455663;455664;455665;455666;455667;455668;455669;455670;455671;455672 360167;360168;360169;360170;360171;360172;360173 360170 7 TVYNPAALK Unmodified 975.53893 0.53893149 2786 Q5T8P6 RBM26 RNA-binding protein 26 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 43.221 42.948 2 0.020387 48782 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 53.166 35.781 1231400000 0 402850000 0 64789000 68029000 43033000 79855000 61019000 50802000 60486000 99969000 91783000 73070000 66410000 69300000 54259 2786 48730 455673;455674;455675;455676;455677;455678;455679;455680;455681;455682;455683;455684;455685 360174;360175 360175 2 TVYPASYR Unmodified 955.47633 0.47633123 4356 Q9H211 CDT1 DNA replication factor Cdt1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 31.253 31.395 2 0.0099306 34122 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 81.297 61.015 83915000 0 0 0 5050500 6164700 8382500 6526500 6641500 5563900 8736800 10249000 14185000 6584500 5829800 0 54260 4356 48731 455686;455687;455688;455689;455690;455691;455692;455693;455694;455695;455696 360176;360177;360178;360179;360180;360181;360182;360183;360184 360180 9 TVYSILR Unmodified 850.49125 0.49125301 804 P05198 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 54.765 55.078 2 0.023433 62432 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 85.359 34.323 122540000 0 0 0 0 0 9172900 0 0 6685400 11763000 18133000 18463000 12343000 14423000 31557000 54261 804 48732 455697;455698;455699;455700;455701;455702;455703;455704 360185;360186;360187;360188;360189 360188 3 TVYSLQPPSALSGGQPADTQTR Unmodified 2273.1288 0.12878893 5183 Q9Y448 KNSTRN Small kinetochore-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 2 1 1 1 1 2 2 2 73.259 73.336 2;3 2.8551E-27 83884 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 109.84 100.95 137430000 0 0 0 0 13284000 0 9391800 0 0 12117000 23731000 15567000 17812000 23450000 22079000 54262 5183 48733 455705;455706;455707;455708;455709;455710;455711;455712;455713;455714;455715;455716 360190;360191;360192;360193;360194;360195;360196;360197 360190 7 TVYVELLPK Unmodified 1060.6168 0.61684746 2684 Q4G0J3 LARP7 La-related protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.043 76.104 2 0.011616 87762 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 62.546 43.764 93294000 0 0 0 3899900 5414500 5596300 5329900 5036100 3824500 9115800 7721600 13139000 9783100 7619700 16814000 54263 2684 48734 455717;455718;455719;455720;455721;455722;455723;455724;455725;455726;455727;455728 360198;360199;360200;360201;360202;360203;360204;360205 360199 8 TVYVSVLPTTADF Unmodified 1411.7235 0.72349737 1441 P41252 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.94 3.58 1 3 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93.888 93.305 2 0.00016418 112261 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.582 86.946 1291700000 390020000 775940000 2010700 1683100 8961100 8268700 5706200 6672500 6183400 19210000 13863000 13889000 4544700 12142000 22640000 54264 1441 48735 455729;455730;455731;455732;455733;455734;455735;455736;455737;455738;455739;455740;455741;455742;455743;455744 360206;360207;360208;360209;360210;360211;360212;360213;360214;360215;360216;360217;360218 360208 12 TWDRFQMR Unmodified 1138.5342 0.53419724 1817 P60866 RPS20 40S ribosomal protein S20 yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 48.169 48.524 3 0.0091012 54090 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.265 55.26 77895000 0 0 0 0 0 5255300 0 5181700 4675000 0 5521800 18088000 7373000 6092000 25709000 54265 1817 48736 455745;455746;455747;455748;455749;455750;455751;455752 360219;360220;360221;360222 360222 4 TWELANNMQEAQSIDEIYK Oxidation (M) 2298.0474 0.047427063 3684 Q92905 COPS5 COP9 signalosome complex subunit 5 yes yes 0 1 0 By MS/MS 2 0 2 2 83.878 79.158 2;3 9.824E-181 98381 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 238.43 226.16 133360000 0 133360000 0 0 0 0 0 0 0 0 0 0 0 0 0 54266 3684 48737 455753;455754 360223;360224;360225 360223 5239 2 TWELANNMQEAQSIDEIYK Unmodified 2282.0525 0.052512441 3684 Q92905 COPS5 COP9 signalosome complex subunit 5 yes yes 0 0 0 By MS/MS By MS/MS 2.2 0.4 4 1 3 2 88.148 84.582 2;3 2.9872E-147 104952 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 223.72 211.74 185240000 0 181830000 3409100 0 0 0 0 0 0 0 0 0 0 0 0 54267 3684 48737 455755;455756;455757;455758;455759 360226;360227;360228;360229 360226 4 TWEQQQEVVSR Unmodified 1388.6684 0.66844211 4940 Q9UJU6 DBNL Drebrin-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 38.298 38.366 2 1.6555E-05 41465 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 155.42 144.26 90729000 0 0 0 5338400 5965200 7687400 5901000 7449300 5739100 11345000 18994000 0 8986300 13323000 0 54268 4940 48738 455760;455761;455762;455763;455764;455765;455766;455767;455768;455769;455770 360230;360231;360232;360233;360234;360235;360236;360237;360238;360239;360240 360236 11 TWEVENPK Unmodified 1001.4818 0.48181054 4693 Q9NW82 WDR70 WD repeat-containing protein 70 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 36.626 36.781 2 0.0067687 39323 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 97.798 78.311 112120000 0 0 0 4307700 4629700 10030000 6343300 7867400 6790800 10985000 0 13504000 11150000 9924700 26590000 54269 4693 48739 455771;455772;455773;455774;455775;455776;455777;455778;455779;455780;455781 360241;360242;360243;360244;360245;360246 360242 6 TWFQEYMNSK Unmodified 1332.5809 0.58087266 3311 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 yes yes 0 0 0 By MS/MS 10 0 1 1 76.022 76.209 2 0.011715 87818 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 53.751 33.422 2949900 0 0 0 0 0 0 0 2949900 0 0 0 0 0 0 0 54270 3311 48740 455782 360247 360247 1 TWFSIPEK Unmodified 1006.5124 0.51238239 722 P00374;Q86XF0 DHFR;DHFRL1 Dihydrofolate reductase;Dihydrofolate reductase, mitochondrial yes no 0 0 0 By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 76.04 76.193 2 0.030702 87303 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.37 38.897 43463000 0 0 0 0 0 2245800 2022100 2698200 1704000 2443900 4954400 6585200 2728300 3476100 14605000 54271 722 48741 455783;455784;455785;455786;455787;455788;455789;455790;455791;455792 360248 360248 1 TWLEEQGMILK Oxidation (M) 1362.6853 0.68533773 1081 P18858 LIG1 DNA ligase 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 77.321 74.63 2 0.017879 85194 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 56.563 38.654 3498700 0 0 3498700 0 0 0 0 0 0 0 0 0 0 0 0 54272 1081 48742 455793;455794;455795 360249;360250;360251 360250 1558 3 TWLEEQGMILK Unmodified 1346.6904 0.69042311 1081 P18858 LIG1 DNA ligase 1 yes yes 0 0 0 By MS/MS 2 0 1 1 83.362 80.9 2 0.024005 98079 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 56.563 36.776 2162200 0 0 2162200 0 0 0 0 0 0 0 0 0 0 0 0 54273 1081 48742 455796 360252 360252 1 TWNDPSVQQDIK Unmodified 1429.6838 0.68375782 932 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.278 51.427 2 4.0442E-20 58424 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 162.36 153.49 1790500000 0 0 0 103340000 113890000 108900000 111580000 137250000 88599000 133010000 201460000 193750000 126040000 149750000 322930000 54274 932 48743 455797;455798;455799;455800;455801;455802;455803;455804;455805;455806;455807;455808 360253;360254;360255;360256;360257;360258;360259;360260;360261;360262;360263;360264;360265;360266;360267;360268;360269;360270;360271;360272;360273;360274 360258 22 TWPTIIDTDDLPRK Unmodified 1669.8675 0.86753585 4808 Q9P265 DIP2B Disco-interacting protein 2 homolog B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 83.789 78.667 3 0.00032537 100134 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 105 87.933 59476000 34242000 20992000 4242700 0 0 0 0 0 0 0 0 0 0 0 0 54275 4808 48744 455809;455810;455811 360275;360276 360276 2 TWQDSDTVK Unmodified 1078.4931 0.49310351 3449 Q8NFQ8 TOR1AIP2 Torsin-1A-interacting protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 24.102 24.29 2 0.0095432 25023 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 66.429 39.292 21862000 0 0 0 4866200 0 0 0 4766500 2319600 3324000 2586000 0 3999300 0 0 54276 3449 48745 455812;455813;455814;455815;455816;455817 360277;360278 360278 2 TWSPPAEELDAPLTLQDAQGLK Unmodified 2379.1958 0.19580586 270 O15287 FANCG Fanconi anemia group G protein yes yes 0 0 0 By MS/MS 2 0 1 1 93.021 88.11 3 8.7452E-21 109395 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.59 97.406 32694000 0 32694000 0 0 0 0 0 0 0 0 0 0 0 0 0 54277 270 48746 455818 360279 360279 1 TWSQGFPGGVDVSEVK Unmodified 1691.8155 0.81550028 531 O75674 TOM1L1 TOM1-like protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 80.555 75.843 2 8.5466E-42 94370 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 148.96 115.07 87116000 0 87116000 0 0 0 0 0 0 0 0 0 0 0 0 0 54278 531 48747 455819 360280 360280 1 TWSREESELQR Unmodified 1419.6743 0.67425577 3666 Q92817 EVPL Envoplakin yes yes 0 0 1 By MS/MS 10 0 1 1 32.55 32.171 3 0.039907 35505 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 38.021 23.334 5649000 0 0 0 5649000 0 0 0 0 0 0 0 0 0 0 0 54279 3666 48748 455820 360281 360281 0 TWTDFEHMETIEK Unmodified 1665.7345 0.73447277 3073 Q7Z2W4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 74.23 74.407 3 0.024515 85792 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 32.43 25.549 9902200 0 0 0 0 0 0 0 4953300 4949000 0 0 0 0 0 0 54280 3073 48749 455821;455822 360282 360282 1 TWTTADFR Unmodified 996.46649 0.46649483 5011 Q9ULX6 AKAP8L A-kinase anchor protein 8-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 53.129 53.316 2 0.0059797 59017 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 104.75 95.23 82129000 0 0 0 0 13926000 0 0 11975000 0 0 16157000 0 0 13211000 26860000 54281 5011 48750 455823;455824;455825;455826;455827;455828 360283;360284;360285;360286;360287 360283 5 TWTTADFRTK Unmodified 1225.6091 0.60913632 5011 Q9ULX6 AKAP8L A-kinase anchor protein 8-like yes yes 0 0 1 By MS/MS 2 0 1 1 54.559 46.45 3 0.010717 63923 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.08 45.037 24216000 24216000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54282 5011 48751 455829 360288 360288 1 TWTVVDAK Unmodified 918.48108 0.48108226 974 P13010 XRCC5 X-ray repair cross-complementing protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46.618 45.576 2 0.0088146 51538 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 84.916 66.225 1298400000 63973000 623060000 52238000 25012000 25589000 40751000 31154000 28358000 26383000 48676000 58748000 59582000 50652000 54272000 109990000 54283 974 48752 455830;455831;455832;455833;455834;455835;455836;455837;455838;455839;455840;455841;455842;455843;455844 360289;360290;360291;360292;360293;360294;360295;360296;360297;360298;360299;360300 360296 12 TWVASNEIK Unmodified 1046.5397 0.53965977 470 O75175 CNOT3 CCR4-NOT transcription complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 43.891 44.175 2 0.016214 49990 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 56.729 23.889 73793000 0 0 0 0 0 8938700 0 0 9578700 9819600 0 0 12629000 12126000 20701000 54284 470 48753 455845;455846;455847;455848;455849;455850 360301;360302;360303;360304;360305 360301 5 TYADYESVNECMEGVCK Unmodified 2053.8067 0.80672779 2013 P84090 ERH Enhancer of rudimentary homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 63.836 63.14 2 3.1529E-146 78127 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 229.97 221.83 57421000 0 29062000 0 0 0 0 0 0 0 0 2848600 5266700 4719000 8618100 6906800 54285 2013 48754 455851;455852;455853;455854;455855;455856 360306;360307;360308;360309;360310;360311;360312;360313 360307 7 TYAEMDPTTAALEK Oxidation (M) 1555.7076 0.70758931 4440 Q9H7Z6 KAT8 Histone acetyltransferase KAT8 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 45.855 45.298 2 3.0309E-13 51216 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 110.08 101.07 56958000 0 12989000 0 4264100 5033100 0 4678600 5703200 0 7190100 0 8474400 4875100 3750700 0 54286 4440 48755 455857;455858;455859;455860;455861;455862;455863;455864;455865;455866 360314;360315;360316;360317;360318;360319;360320;360321;360322;360323 360314 5884 10 TYAEVDRQVIPIIGK Unmodified 1700.9461 0.94612052 3979 Q96RU3 FNBP1 Formin-binding protein 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 76.167 76.026 3 0.0024645 87262 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.301 26.209 77516000 0 0 7719000 2408700 2359700 7480600 4014100 6417000 5098700 7904800 5575600 9160000 2426700 4213600 12738000 54287 3979 48756 455867;455868;455869;455870;455871;455872;455873;455874;455875;455876;455877;455878;455879 360324;360325;360326;360327;360328;360329;360330 360327 7 TYAICGAIR Unmodified 1023.5172 0.51715019 1948 P63220 RPS21 40S ribosomal protein S21 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 49.641 50.352 2 0.0056908 55807 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.058 59.21 35356000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35356000 54288 1948 48757 455880;455881 360331;360332 360331 2 TYALFIGDTVLVDEDGPATVLTSVK Unmodified 2623.3633 0.36326512 5231 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 98.996 92.4 3 4.5341E-126 117965 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 162.65 158.84 87313000 87313000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54289 5231 48758 455882;455883;455884 360333;360334;360335 360334 2 TYALQLANTNPLYPDFSTSANNIQIDK Unmodified 3011.4876 0.48763078 2052 Q01415 GALK2 N-acetylgalactosamine kinase yes yes 0 0 0 By MS/MS 2 0 1 1 95.174 90.309 3 2.5874E-66 111972 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.27 108.42 32250000 0 32250000 0 0 0 0 0 0 0 0 0 0 0 0 0 54290 2052 48759 455885 360336 360336 1 TYASGYAHYEEQEN Unmodified 1660.6641 0.66414459 5175 Q9Y3S2 ZNF330 Zinc finger protein 330 yes yes 0 0 0 By MS/MS 2 0 1 1 41.153 36.101 2 0.0011471 46993 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.313 89.433 13409000 0 13409000 0 0 0 0 0 0 0 0 0 0 0 0 0 54291 5175 48760 455886 360337 360337 1 TYAVGIQQVLLK Unmodified 1331.7813 0.78128702 282 O15397 IPO8 Importin-8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82.79 81.814 2 1.1262E-05 103612 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.87 95.721 235710000 67295000 46346000 2267000 3254200 4865800 16207000 7132600 8375800 6311300 15236000 9268900 13406000 6666700 8455900 20620000 54292 282 48761 455887;455888;455889;455890;455891;455892;455893;455894;455895;455896;455897;455898;455899;455900;455901 360338;360339;360340;360341;360342;360343;360344;360345;360346;360347;360348;360349;360350;360351;360352 360345 15 TYDAASYICEAAFDEVK Unmodified 1951.851 0.85095909 1446 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.91 3.42 4 2 16 4 2 1 1 1 2 2 2 2 2 1 2 86.434 85.572 2;3 3.6902E-52 105458 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 144.27 132.63 500590000 0 354810000 3931300 0 2537400 5118600 2096700 5702600 9770200 24356000 20889000 25446000 0 5051700 40887000 54293 1446 48762 455902;455903;455904;455905;455906;455907;455908;455909;455910;455911;455912;455913;455914;455915;455916;455917;455918;455919;455920;455921;455922;455923 360353;360354;360355;360356;360357;360358;360359;360360;360361;360362;360363;360364;360365;360366;360367;360368;360369 360356 14 TYDATTHFETTCDDIK Unmodified 1916.8098 0.80982255 1620 P50395 GDI2 Rab GDP dissociation inhibitor beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.74 2.92 3 16 1 1 1 2 1 1 1 1 1 2 2 1 2 2 49.877 49.107 2;3 1.6287E-35 55334 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 151.78 141.73 1034400000 27282000 519030000 16221000 55033000 12714000 14242000 28101000 17577000 0 13064000 69583000 46500000 15335000 50082000 149610000 54294 1620 48763 455924;455925;455926;455927;455928;455929;455930;455931;455932;455933;455934;455935;455936;455937;455938;455939;455940;455941;455942 360370;360371;360372;360373;360374;360375;360376;360377;360378;360379;360380;360381;360382;360383;360384;360385;360386;360387 360379 17 TYDETYQR Unmodified 1074.4618 0.46180338 232 O14974 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 17.563 17.753 2 0.0081134 17929 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 87.323 78.109 62307000 0 0 0 4610500 3770000 3654600 4366000 3919000 3587300 0 6397300 15932000 6102300 3844800 6122400 54295 232 48764 455943;455944;455945;455946;455947;455948;455949;455950;455951;455952;455953 360388;360389;360390;360391;360392;360393;360394 360389 7 TYDLYITYDK Unmodified 1293.6129 0.61288429 4632 Q9NT62 ATG3 Ubiquitin-like-conjugating enzyme ATG3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 70.14 70.201 2 0.0084125 80081 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.102 45.429 62718000 0 0 0 2008100 3403800 9500000 6048600 0 5250400 7870400 6555800 6140900 0 4615500 11324000 54296 4632 48765 455954;455955;455956;455957;455958;455959;455960;455961;455962;455963 360395;360396;360397;360398;360399;360400;360401;360402;360403 360398 9 TYDPSGDSTLPTCSK Unmodified 1627.7036 0.70356657 5125 Q9Y2X3 NOP58 Nucleolar protein 58 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.76 40.94 2 7.511E-07 45390 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 94.191 87.808 66840000 0 0 0 3611200 4074200 3956600 5232400 0 5297000 6793200 5883700 13383000 5771300 5007500 7830000 54297 5125 48766 455964;455965;455966;455967;455968;455969;455970;455971;455972;455973;455974;455975 360404;360405;360406;360407;360408;360409;360410;360411;360412;360413;360414;360415 360409 12 TYDRDNSGMIDK Unmodified 1413.6194 0.61944301 480 O75340 PDCD6 Programmed cell death protein 6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 2 1 1 1 2 20.498 20.738 2;3 0.024314 21332 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 35.737 21.057 205570000 0 0 0 15372000 9096100 0 0 10682000 10504000 25441000 23607000 0 21728000 14020000 75121000 54298 480 48767 455976;455977;455978;455979;455980;455981;455982;455983;455984;455985;455986 360416;360417 360417 2 TYDYLFK Unmodified 948.45928 0.45928418 1824;3689 P61006;Q92930 RAB8A;RAB8B Ras-related protein Rab-8A;Ras-related protein Rab-8B no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65.302 64.379 2 0.019328 73531 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 110.34 93.373 316440000 7288800 70553000 0 8549600 11709000 14958000 15504000 23993000 11539000 25245000 29267000 24692000 15619000 18146000 39376000 54299 1824;3689 48768 455987;455988;455989;455990;455991;455992;455993;455994;455995;455996;455997;455998;455999;456000 360418;360419;360420;360421;360422;360423;360424;360425;360426 360424 9 TYEAALETIQNMSK Oxidation (M) 1613.7607 0.76068752 129 O00231 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.9 2.69 2 1 18 2 1 2 2 2 1 1 1 1 2 2 1 2 1 65.631 64.992 2;3 7.7474E-45 82081 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 174.57 152.56 385700000 0 196500000 3399700 14314000 18560000 16395000 8063400 4369900 4798500 16720000 30551000 46099000 5033700 10820000 10077000 54300 129 48769 456001;456002;456003;456004;456005;456006;456007;456008;456009;456010;456011;456012;456013;456014;456015;456016;456017;456018;456019;456020;456021 360427;360428;360429;360430;360431;360432;360433;360434;360435;360436;360437;360438;360439;360440;360441;360442;360443;360444;360445;360446 360431 173 20 TYEAALETIQNMSK Unmodified 1597.7658 0.76577289 129 O00231 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.11 3.8 6 1 12 1 4 2 1 1 1 1 1 1 1 1 1 1 1 1 81.138 79.74 2;3 2.8647E-29 98983 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 169.82 149.04 1054800000 18788000 846000000 15114000 2763300 9537900 10245000 2346300 7433900 3090600 33973000 27164000 38363000 3271300 5336900 31360000 54301 129 48769 456022;456023;456024;456025;456026;456027;456028;456029;456030;456031;456032;456033;456034;456035;456036;456037;456038;456039;456040 360447;360448;360449;360450;360451;360452;360453;360454;360455;360456;360457;360458;360459;360460;360461;360462;360463 360449 14 TYEEIASLVAEQPK Unmodified 1576.7985 0.79845323 5252 Q9Y5X1 SNX9 Sorting nexin-9 yes yes 0 0 0 By MS/MS 2 0 1 1 83.216 78.496 3 1.1997E-18 97593 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.56 110.45 77410000 0 77410000 0 0 0 0 0 0 0 0 0 0 0 0 0 54302 5252 48770 456041 360464 360464 1 TYEEIASLVAEQPKK Unmodified 1704.8934 0.89341625 5252 Q9Y5X1 SNX9 Sorting nexin-9 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 77.107 73.449 3 0.00021747 89294 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 81.619 76.002 55069000 0 42545000 12524000 0 0 0 0 0 0 0 0 0 0 0 0 54303 5252 48771 456042;456043;456044 360465;360466;360467 360467 3 TYEGMMHSSCQQEMMDVK 3 Oxidation (M) 2238.836 0.83599578 524 O75608 LYPLA1 Acyl-protein thioesterase 1 yes yes 0 3 0 By MS/MS By MS/MS 2 0 2 1 1 28.145 24.443 3 0.00047451 32071 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 50.178 50.178 28174000 0 25132000 3042000 0 0 0 0 0 0 0 0 0 0 0 0 54304 524 48772 456045;456046 360468 360468 679;680;681;682 1 TYEGMMHSSCQQEMMDVK 2 Oxidation (M) 2222.8411 0.84108116 524 O75608 LYPLA1 Acyl-protein thioesterase 1 yes yes 0 2 0 By MS/MS By matching 2 0 2 1 1 39.537 35.266 3 0.00059755 46043 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 51.566 51.566 40592000 0 37097000 3494500 0 0 0 0 0 0 0 0 0 0 0 0 54305 524 48772 456047;456048 360469 360469 679;680;681;682 1 TYEGMMHSSCQQEMMDVK Oxidation (M) 2206.8462 0.84616653 524 O75608 LYPLA1 Acyl-protein thioesterase 1 yes yes 0 1 0 By MS/MS By MS/MS 2 0 4 3 1 50.607 45.325 3 1.1069E-05 60933 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.661 73.452 144420000 0 140960000 3461300 0 0 0 0 0 0 0 0 0 0 0 0 54306 524 48772 456049;456050;456051;456052 360470;360471;360472;360473 360473 679;680;681;682 4 TYEGMMHSSCQQEMMDVK Unmodified 2190.8513 0.85125191 524 O75608 LYPLA1 Acyl-protein thioesterase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.2 3.92 3 2 1 1 1 1 1 59.865 56.411 3 9.1474E-06 73698 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.239 71.635 88205000 5335100 66818000 4442300 0 0 2473500 0 0 0 0 0 0 0 0 9135500 54307 524 48772 456053;456054;456055;456056;456057 360474;360475;360476;360477;360478;360479 360475 6 TYEHFNAMGK Unmodified 1196.5284 0.52844316 1039 P16435 POR NADPH--cytochrome P450 reductase yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.48 3.14 4 17 2 1 1 1 1 1 1 2 1 2 1 1 2 2 2 32.304 31.473 2;3 3.292E-05 44778 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 125.16 105.38 319090000 74528000 14031000 22253000 9331300 9215500 15249000 13397000 19426000 12260000 16093000 19127000 27771000 23668000 18641000 24095000 54308 1039 48773 456058;456059;456060;456061;456062;456063;456064;456065;456066;456067;456068;456069;456070;456071;456072;456073;456074;456075;456076;456077;456078 360480;360481;360482;360483;360484;360485;360486;360487;360488 360483 5 TYEHFNAMGK Oxidation (M) 1212.5234 0.52335778 1039 P16435 POR NADPH--cytochrome P450 reductase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 23.37 19.414 3 0.0071954 27206 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.699 48.328 84436000 44893000 17736000 21807000 0 0 0 0 0 0 0 0 0 0 0 0 54309 1039 48773 456079;456080;456081 360489;360490 360489 1463 1 TYELLNCDK Unmodified 1154.5278 0.52777445 3694 Q92979 EMG1 Ribosomal RNA small subunit methyltransferase NEP1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 51.442 46.107 2 0.019107 59797 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.87 96.09 99139000 0 99139000 0 0 0 0 0 0 0 0 0 0 0 0 0 54310 3694 48774 456082;456083 360491 360491 0 TYELTTDNMLK Oxidation (M) 1343.6279 0.62788243 2838 Q63HN8 RNF213 E3 ubiquitin-protein ligase RNF213 yes yes 0 1 0 By MS/MS 2 0 1 1 53.361 47.569 2 4.283E-09 61500 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.86 108.16 40230000 0 40230000 0 0 0 0 0 0 0 0 0 0 0 0 0 54311 2838 48775 456084 360492 360492 4501 1 TYELTTDNMLK Unmodified 1327.633 0.63296781 2838 Q63HN8 RNF213 E3 ubiquitin-protein ligase RNF213 yes yes 0 0 0 By MS/MS 2 0 1 1 70.541 64.724 2 0.0010941 82013 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.867 54.308 30386000 0 30386000 0 0 0 0 0 0 0 0 0 0 0 0 0 54312 2838 48775 456085 360493 360493 1 TYETTLEK Unmodified 983.48114 0.48114184 64 CON__P02768-1;P02768 ALB Serum albumin yes no 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 25.309 25.511 2 0.0045343 26575 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 110.31 47.162 + 1779700000 0 0 0 545060000 27723000 21766000 22936000 894530000 20283000 38101000 42079000 35699000 74906000 16283000 40301000 54313 64 48776 456086;456087;456088;456089;456090;456091;456092;456093;456094;456095;456096;456097 360494;360495;360496;360497;360498;360499;360500;360501;360502 360500 9 TYEVSLR Unmodified 866.44978 0.44978213 2608 Q16531 DDB1 DNA damage-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.005 41.183 2 0.04393 46575 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 67.032 34.562 315220000 0 0 0 13672000 12759000 21182000 17788000 11677000 9314600 20078000 40349000 43074000 25854000 30875000 68594000 54314 2608 48777 456098;456099;456100;456101;456102;456103;456104;456105;456106;456107;456108;456109 360503 360503 1 TYEVSLREK Unmodified 1123.5873 0.58733824 2608 Q16531 DDB1 DNA damage-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 38.232 33.338 2 0.00546 42188 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 129.42 65.856 423890000 158930000 130400000 134560000 0 0 0 0 0 0 0 0 0 0 0 0 54315 2608 48778 456110;456111;456112;456113 360504;360505;360506;360507 360507 1 TYFNILIKPETLAK Unmodified 1649.9392 0.93924423 375 O43847 NRD1 Nardilysin yes yes 0 0 1 By MS/MS 10 0 1 1 83.381 83.571 3 0.0030394 96420 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.434 44.219 9335200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9335200 54316 375 48779 456114 360508 360508 1 TYFPHFDLSHGSAQVK Unmodified 1832.8846 0.8845829 55;1969 CON__P01966;P69905 HBA1 Hemoglobin subunit alpha no no 0 0 0 By matching By MS/MS 10 0 2 1 1 70.876 71.176 3 0.00060348 81258 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.168 47.264 + 8930100 0 0 0 0 0 0 0 0 1499900 0 0 0 0 0 7430100 54317 55;1969 48780 456115;456116 360509 360509 1 TYGADLASVDFQHASEDAR Unmodified 2051.9185 0.9184618 1289 P30740 SERPINB1 Leukocyte elastase inhibitor yes yes 0 0 0 By MS/MS 10 0 1 1 68.472 68.966 3 0.047281 78585 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 22.118 18.398 9055400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9055400 54318 1289 48781 456117 360510 360510 1 TYGADLASVDFQHASEDARK Unmodified 2180.0134 0.013424818 1289 P30740 SERPINB1 Leukocyte elastase inhibitor yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.77 5 2 11 3 2 2 2 1 1 1 1 1 2 2 65.415 63.245 3;4 5.9961E-30 84544 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 118.96 114.77 791220000 113050000 325670000 168910000 0 0 14660000 0 9087200 6671900 9860600 18244000 17863000 0 20101000 87096000 54319 1289 48782 456118;456119;456120;456121;456122;456123;456124;456125;456126;456127;456128;456129;456130;456131;456132;456133;456134;456135 360511;360512;360513;360514;360515;360516;360517;360518;360519;360520;360521;360522;360523;360524;360525;360526;360527;360528;360529;360530;360531 360523 19 TYGCVPVANK Unmodified 1107.5383 0.53827956 491 O75391 SPAG7 Sperm-associated antigen 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 33.038 33.392 2 0.022642 35464 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.972 25.025 39628000 0 0 0 0 2458400 0 0 0 0 0 8992900 9776300 1857800 5453300 11090000 54320 491 48783 456136;456137;456138;456139;456140;456141 360532;360533;360534 360532 3 TYGEPESAGPSR Unmodified 1249.5575 0.55749468 1621 P50402 EMD Emerin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 21.157 21.288 2 0.00083099 21640 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 73.887 66.693 52997000 0 0 0 4344600 5589200 4743500 5792900 4294300 6028800 6171400 6126500 9906200 0 0 0 54321 1621 48784 456142;456143;456144;456145;456146;456147;456148;456149;456150 360535;360536;360537;360538;360539;360540;360541;360542;360543 360539 8 TYGFHFTTPALVVEK Unmodified 1708.8825 0.88245763 306 O43237 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 89.425 82.924 3 9.3875E-07 105031 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.4 93.359 75652000 59546000 16106000 0 0 0 0 0 0 0 0 0 0 0 0 0 54322 306 48785 456151;456152 360544;360545 360544 2 TYGGCEGPDAMYVK Oxidation (M) 1562.6381 0.63812954 2522 Q15369 TCEB1 Transcription elongation factor B polypeptide 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.05 3.87 1 5 1 12 1 5 1 1 1 1 1 1 1 1 1 1 1 1 1 39.972 38.606 2 4.1863E-19 43621 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 129.88 125.58 1117300000 28472000 816170000 5118000 17618000 14903000 16935000 18915000 11052000 13180000 22246000 29233000 36110000 26699000 24234000 36466000 54323 2522 48786 456153;456154;456155;456156;456157;456158;456159;456160;456161;456162;456163;456164;456165;456166;456167;456168;456169;456170;456171 360546;360547;360548;360549;360550;360551;360552;360553;360554;360555;360556;360557;360558;360559;360560;360561;360562;360563;360564;360565;360566 360546 4157 21 TYGGCEGPDAMYVK Unmodified 1546.6432 0.64321492 2522 Q15369 TCEB1 Transcription elongation factor B polypeptide 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 4 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 50.108 49.044 2 1.4367E-218 62333 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 261.35 255.05 1924200000 35032000 1243300000 4392100 20443000 24310000 36870000 40678000 45769000 17632000 52898000 77247000 79758000 52642000 70761000 122390000 54324 2522 48786 456172;456173;456174;456175;456176;456177;456178;456179;456180;456181;456182;456183;456184;456185;456186;456187 360567;360568;360569;360570;360571;360572;360573;360574;360575;360576;360577;360578;360579;360580;360581;360582;360583;360584;360585 360572 19 TYGGDTGSPEISFTK Unmodified 1558.7151 0.71511753 603 O94915 FRYL Protein furry homolog-like yes yes 0 0 0 By MS/MS 2 0 1 1 63.51 57.603 2 0.0006916 73681 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.709 51.455 37326000 0 37326000 0 0 0 0 0 0 0 0 0 0 0 0 0 54325 603 48787 456188 360586 360586 1 TYGHTYEK Unmodified 997.45051 0.45051041 5277 Q9Y6D6 ARFGEF1 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 8.8907 5.8051 2 0.0060667 8426 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 139.97 119.42 45321000 21824000 13498000 9999200 0 0 0 0 0 0 0 0 0 0 0 0 54326 5277 48788 456189;456190;456191 360587;360588;360589 360587 3 TYGNTDGPETGFSAIDTDER Unmodified 2144.9134 0.913436 4752 Q9NYV4 CDK12 Cyclin-dependent kinase 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.088 65.176 2 9.0406E-47 73997 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 112.72 107.23 51800000 0 0 0 2586600 2513400 3251400 4467100 3234000 2937700 3922100 7043900 5309000 4138100 5133600 7262900 54327 4752 48789 456192;456193;456194;456195;456196;456197;456198;456199;456200;456201;456202;456203 360590;360591;360592;360593;360594;360595;360596;360597;360598;360599;360600;360601 360593 12 TYGQSTYSR Unmodified 1061.4778 0.47778779 1369 P35998 PSMC2 26S protease regulatory subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.749 14.919 2 0.00022531 14404 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 148.99 97.651 587330000 0 0 0 34682000 28919000 53968000 19120000 18838000 20189000 77537000 84993000 120580000 25985000 31649000 70875000 54328 1369 48790 456204;456205;456206;456207;456208;456209;456210;456211;456212;456213;456214;456215 360602;360603;360604;360605;360606;360607;360608;360609;360610 360608 8 TYGQSTYSRQIK Unmodified 1430.7154 0.7153923 1369 P35998 PSMC2 26S protease regulatory subunit 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 28.898 24.237 2;3 0.0039043 30811 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 80.69 60.486 368450000 350150000 7302200 10995000 0 0 0 0 0 0 0 0 0 0 0 0 54329 1369 48791 456216;456217;456218;456219 360611;360612;360613 360613 2 TYGTTTAPRDEDGSTLFR Unmodified 1986.9283 0.9282982 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.121 52.268 3 9.6951E-08 58923 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 81.428 72.927 208690000 0 0 0 12005000 15597000 18304000 18138000 17024000 16066000 18641000 20183000 21326000 14159000 15919000 21327000 54330 4285 48792 456220;456221;456222;456223;456224;456225;456226;456227;456228;456229;456230;456231 360614;360615;360616;360617;360618;360619;360620;360621;360622;360623;360624;360625;360626;360627;360628;360629;360630 360623 17 TYGVSFFLVK Unmodified 1159.6277 0.6277465 5187;5201 Q9Y490;Q9Y4G6 TLN1;TLN2 Talin-1;Talin-2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 86.898 87.039 2 0.005999 100921 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.692 45.392 50651000 0 0 0 0 0 7526700 2811700 2995100 3622600 6455000 3593400 4630100 2461100 2998100 13557000 54331 5187;5201 48793 456232;456233;456234;456235;456236;456237;456238;456239;456240;456241 360631;360632;360633;360634;360635;360636;360637 360631 7 TYHALSNLPK Unmodified 1142.6084 0.60840804 129 O00231 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.19 3.34 7 24 3 2 2 2 2 2 2 2 2 2 2 2 2 2 2 40.84 39.617 2;3 1.0526E-10 42389 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 144.65 120.43 3757300000 1380800000 600550000 316880000 74810000 87032000 121760000 46075000 32645000 33174000 178500000 327120000 293780000 51817000 61812000 150580000 54332 129 48794 456242;456243;456244;456245;456246;456247;456248;456249;456250;456251;456252;456253;456254;456255;456256;456257;456258;456259;456260;456261;456262;456263;456264;456265;456266;456267;456268;456269;456270;456271;456272 360638;360639;360640;360641;360642;360643;360644;360645;360646;360647;360648;360649;360650;360651;360652;360653;360654;360655;360656;360657;360658;360659;360660;360661;360662;360663;360664;360665 360661 11 TYHEVVDEIYFK Unmodified 1541.7402 0.74021007 2815 Q5VTL8 PRPF38B Pre-mRNA-splicing factor 38B yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 69.815 70.125 3 0.0053573 79832 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.948 41.746 10463000 0 0 0 0 0 0 0 3085900 0 0 2456200 0 0 0 4920900 54333 2815 48795 456273;456274;456275 360666 360666 1 TYHMYNADSISAQSK Unmodified 1714.7621 0.7620845 451 O75044;P0DMP2;P0DJJ0 SRGAP2;SRGAP2B;SRGAP2C SLIT-ROBO Rho GTPase-activating protein 2;SLIT-ROBO Rho GTPase-activating protein 2B;SLIT-ROBO Rho GTPase-activating protein 2C yes no 0 0 0 By MS/MS By matching 2 0 3 2 1 47.901 41.412 2;3 0.0015785 57204 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.724 30.089 34602000 28107000 0 6495000 0 0 0 0 0 0 0 0 0 0 0 0 54334 451 48796 456276;456277;456278 360667;360668 360667 2 TYHYHCGVQDK Unmodified 1406.6037 0.60373336 3244 Q8IWS0 PHF6 PHD finger protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 5 2 1 2 15.37 12.135 2;3 1.1494E-10 17909 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 152.54 114.45 134680000 98995000 15638000 20047000 0 0 0 0 0 0 0 0 0 0 0 0 54335 3244 48797 456279;456280;456281;456282;456283 360669;360670;360671;360672 360670 3 TYIQTELPFK Unmodified 1238.6547 0.65468953 690 O95785 WIZ Protein Wiz yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 77.529 76.882 2 9.316E-06 95409 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.06 110.09 328970000 0 152090000 0 0 10316000 17561000 15161000 13346000 12840000 32149000 0 25029000 0 22422000 28057000 54336 690 48798 456284;456285;456286;456287;456288;456289;456290;456291;456292;456293;456294;456295;456296 360673;360674;360675;360676;360677;360678;360679;360680;360681;360682;360683;360684 360676 12 TYITDPVSAPCAPPLQPK Unmodified 1953.987 0.98699906 3706 Q93052 LPP Lipoma-preferred partner yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.69 2.88 3 2 24 1 4 2 2 2 2 2 2 2 2 2 2 2 2 77.241 76.451 2;3 1.5877E-128 88241 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 203.61 187.26 1165500000 8588600 892290000 0 6902900 8171000 9651500 15013000 10586000 11237000 22713000 35622000 34774000 15303000 33132000 61538000 54337 3706 48799 456297;456298;456299;456300;456301;456302;456303;456304;456305;456306;456307;456308;456309;456310;456311;456312;456313;456314;456315;456316;456317;456318;456319;456320;456321;456322;456323;456324;456325 360685;360686;360687;360688;360689;360690;360691;360692;360693;360694;360695;360696;360697;360698;360699;360700;360701;360702;360703;360704 360691 19 TYLDGEGCIVTEK Unmodified 1483.6865 0.68645994 2489 Q15054 POLD3 DNA polymerase delta subunit 3 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching 8.64 2.9 1 1 9 2 1 1 1 1 1 1 1 1 1 57.347 56.463 2 4.7269E-08 70883 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.06 96.598 237140000 0 174250000 0 3987900 5658800 8507000 4471700 0 0 0 7393900 9379800 7992300 4506700 10996000 54338 2489 48800 456326;456327;456328;456329;456330;456331;456332;456333;456334;456335;456336 360705;360706;360707;360708;360709;360710;360711;360712 360707 8 TYLEEELDK Unmodified 1138.5394 0.539385 2629 Q16719 KYNU Kynureninase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.12 3.89 3 1 4 1 2 1 1 1 1 1 53.787 51.193 2 0.0034229 57832 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 99.802 66.962 3209500000 58532000 2946300000 31311000 0 0 0 0 0 0 0 35004000 28264000 0 21362000 88730000 54339 2629 48801 456337;456338;456339;456340;456341;456342;456343;456344 360713;360714;360715;360716;360717;360718;360719;360720;360721;360722;360723 360723 10 TYLFLQK Unmodified 911.51165 0.5116541 4930 Q9UIV8 SERPINB13 Serpin B13 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 66.023 65.745 2 0.03857 76134 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 69.432 50.767 11426000 0 0 0 9127600 0 0 0 0 0 2298700 0 0 0 0 0 54340 4930 48802 456345;456346 360724 360724 1 TYLGEEGK Unmodified 895.42871 0.42871234 4180 Q9BV86 NTMT1 N-terminal Xaa-Pro-Lys N-methyltransferase 1;N-terminal Xaa-Pro-Lys N-methyltransferase 1, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 21.979 17.674 2 0.04585 22901 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.214 47.354 159680000 7866400 151810000 0 0 0 0 0 0 0 0 0 0 0 0 0 54341 4180 48803 456347;456348 360725 360725 1 TYLGMSTLR Unmodified 1040.5325 0.5324659 3663 Q92797 SYMPK Symplekin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 58.859 59.031 2 0.011616 66305 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.546 42.91 29963000 0 0 0 0 2196500 3819200 0 3375900 0 3018500 0 4163300 3110400 3268000 7011500 54342 3663 48804 456349;456350;456351;456352;456353;456354;456355;456356 360726;360727 360726 2 TYLGMSTLR Oxidation (M) 1056.5274 0.52738052 3663 Q92797 SYMPK Symplekin yes yes 0 1 0 By MS/MS 10 0 1 1 39.753 40.505 2 0.018057 44584 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 49.418 38.007 5714200 0 0 0 0 0 0 0 0 0 0 0 5714200 0 0 0 54343 3663 48804 456357 360728 360728 5198 1 TYLISSIPLQGAFNYK Unmodified 1813.9614 0.96143623 966 P12273 PIP Prolactin-inducible protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 91.046 91.18 2 7.3576E-08 105655 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 113.63 95.82 25738000 0 0 0 0 0 1663600 0 2471700 0 5618700 4802800 0 0 1496200 9684900 54344 966 48805 456358;456359;456360;456361;456362;456363 360729;360730;360731;360732 360731 4 TYLLDFR Unmodified 926.48617 0.48616764 2238 Q13131 PRKAA1 5'-AMP-activated protein kinase catalytic subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.531 76.589 2 0.039143 88376 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 69.176 37.062 86789000 0 0 0 3547800 3653500 7486500 5787600 6530500 7165200 7865700 10181000 9274200 5497100 6522700 13277000 54345 2238 48806 456364;456365;456366;456367;456368;456369;456370;456371;456372;456373;456374;456375 360733;360734;360735;360736 360734 4 TYLLPDNHK Unmodified 1099.5662 0.56620887 156 O00443 PIK3C2A Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha yes yes 0 0 0 By MS/MS 2 0 1 1 43.921 37.127 2 0.067066 51039 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.073 42.644 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54346 156 48807 456376 360737 360737 1 TYLNLMGK Oxidation (M) 954.48445 0.48445308 2346 Q13835 PKP1 Plakophilin-1 yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 44.209 44.377 2 0.0059424 49733 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 84.244 52.127 54483000 0 0 0 0 0 0 0 54483000 0 0 0 0 0 0 0 54347 2346 48808 456377;456378 360738;360739 360738 3822 2 TYLNLMGK Unmodified 938.48954 0.48953845 2346 Q13835 PKP1 Plakophilin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 62.55 62.422 2 0.01661 71066 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 66.993 50.288 29354000 0 0 0 5996600 0 0 2489800 20868000 0 0 0 0 0 0 0 54348 2346 48808 456379;456380;456381 360740;360741 360740 2 TYLNPWK Unmodified 920.4756 0.47560295 210 O14757 CHEK1 Serine/threonine-protein kinase Chk1 yes yes 0 0 0 By MS/MS 2 0 1 1 66.884 58.589 2 0.030851 78595 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 91.584 76.145 20613000 20613000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54349 210 48809 456382 360742 360742 1 TYLPSQVSR Unmodified 1049.5506 0.55055881 1358 P35606 COPB2 Coatomer subunit beta' yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.009 41.187 2 0.0039854 45961 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 97.635 78.853 503620000 0 0 0 24406000 22182000 26330000 43478000 31841000 23021000 43905000 59864000 46226000 50100000 41705000 90565000 54350 1358 48810 456383;456384;456385;456386;456387;456388;456389;456390;456391;456392;456393;456394 360743;360744;360745;360746;360747;360748;360749;360750;360751;360752;360753;360754;360755 360751 9 TYLRPITEAPSNK Unmodified 1488.7936 0.79364262 2830 Q5VZ89 DENND4C DENN domain-containing protein 4C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.045 43.22 3 6.8359E-05 47666 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 85.163 75.243 300840000 0 0 0 18682000 18877000 24156000 25266000 32878000 18992000 26350000 24315000 40741000 22179000 19959000 28441000 54351 2830 48811 456395;456396;456397;456398;456399;456400;456401;456402;456403;456404;456405;456406 360756;360757;360758;360759;360760;360761;360762;360763;360764;360765;360766;360767;360768;360769;360770;360771 360769 16 TYMDVMR Oxidation (M) 930.39392 0.39392351 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.266 28.461 2 0.049603 30501 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 49.358 41.029 114360000 0 0 0 5758800 6618100 6952700 7813100 7256800 5908100 10032000 11535000 11751000 14052000 11177000 15505000 54352 516 48812 456407;456408;456409;456410;456411;456412;456413;456414;456415;456416;456417;456418 360772 360772 1 TYNEPGSQVFK Unmodified 1268.6037 0.60371659 3143 Q86U86 PBRM1 Protein polybromo-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 45.299 44.813 2 0.00055188 49272 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.525 36.388 149850000 0 97898000 0 0 0 5606400 0 0 0 9627900 0 7635100 8921100 6442200 13722000 54353 3143 48813 456419;456420;456421;456422;456423;456424;456425;456426;456427;456428 360773;360774;360775;360776;360777;360778;360779;360780;360781;360782;360783 360777 11 TYNFLPEFLVSTQK Unmodified 1685.8665 0.86647322 1289 P30740 SERPINB1 Leukocyte elastase inhibitor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 4 3.46 3 1 1 1 1 1 96.38 92.57 2 1.1444E-05 115705 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 117.23 109.14 252960000 124370000 121430000 1854200 0 0 0 0 0 0 0 0 0 0 0 5304700 54354 1289 48814 456429;456430;456431;456432 360784;360785;360786 360786 3 TYNNLDVSVTK Unmodified 1252.6299 0.62993134 1742 P54619 PRKAG1 5'-AMP-activated protein kinase subunit gamma-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 47.821 47.528 2 0.00038845 53456 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 100.48 90.696 251980000 0 105760000 0 8123100 7691500 14097000 8791300 8999800 6791700 15158000 14904000 20937000 12300000 10211000 18219000 54355 1742 48815 456433;456434;456435;456436;456437;456438;456439;456440;456441;456442;456443;456444;456445 360787;360788;360789;360790;360791;360792;360793;360794;360795;360796;360797 360791 11 TYNSDWHLVNYK Unmodified 1538.7154 0.7153923 4258 Q9BZ29 DOCK9 Dedicator of cytokinesis protein 9 yes yes 0 0 0 By MS/MS 2 0 1 1 71.881 63.643 3 0.0015313 84586 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.76 69.583 8307300 8307300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54356 4258 48816 456446 360798 360798 1 TYNTDVPLVLMNSFNTDEDTK Oxidation (M) 2432.1053 0.10533587 2638 Q16851 UGP2 UTP--glucose-1-phosphate uridylyltransferase yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 87.7 83.671 3 1.906E-09 100518 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 62.325 59.181 121020000 0 121020000 0 0 0 0 0 0 0 0 0 0 0 0 0 54357 2638 48817 456447;456448 360799;360800;360801 360801 4293 2 TYNTDVPLVLMNSFNTDEDTK Unmodified 2416.1104 0.11042125 2638 Q16851 UGP2 UTP--glucose-1-phosphate uridylyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 2 3 2 95.8 90.922 2;3 1.7222E-138 113726 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 261.61 248.81 923330000 31609000 880660000 11059000 0 0 0 0 0 0 0 0 0 0 0 0 54358 2638 48817 456449;456450;456451;456452;456453;456454;456455 360802;360803;360804;360805;360806;360807;360808 360802 6 TYNTDVPLVLMNSFNTDEDTKK Unmodified 2544.2054 0.20538427 2638 Q16851 UGP2 UTP--glucose-1-phosphate uridylyltransferase yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 92.994 89.31 3 3.4048E-40 111222 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.61 115.9 42616000 0 40537000 2079400 0 0 0 0 0 0 0 0 0 0 0 0 54359 2638 48818 456456;456457 360809 360809 1 TYNVTDDK Unmodified 954.42944 0.42944062 2406 Q14432 PDE3A cGMP-inhibited 3',5'-cyclic phosphodiesterase A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.307 15.478 2 0.0052913 14278 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 127.46 102.01 166220000 0 0 0 7478700 8565800 9545800 11620000 10020000 8824600 12525000 19054000 17510000 21477000 19879000 19723000 54360 2406 48819 456458;456459;456460;456461;456462;456463;456464;456465;456466;456467;456468;456469 360810;360811;360812;360813;360814;360815;360816;360817;360818;360819;360820 360813 2 TYPGVMHSSCPQEMAAVK Oxidation (M) 2007.8853 0.88525288 648 O95372 LYPLA2 Acyl-protein thioesterase 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 5 2 2 1 49.711 43.5 3 2.0932E-05 58516 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.713 72.745 214200000 88630000 113890000 11688000 0 0 0 0 0 0 0 0 0 0 0 0 54361 648 48820 456470;456471;456472;456473;456474 360821;360822;360823;360824;360825;360826 360822 789;790 6 TYPGVMHSSCPQEMAAVK Unmodified 1991.8903 0.89033826 648 O95372 LYPLA2 Acyl-protein thioesterase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.6 3.2 4 1 2 1 1 1 59.812 54.696 2;3 3.0168E-08 71366 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.227 84.241 349810000 159860000 156370000 26787000 0 0 0 0 0 0 0 0 0 0 0 6794900 54362 648 48820 456475;456476;456477;456478;456479 360827;360828;360829;360830;360831 360827 3 TYPVNTPERWEK Unmodified 1518.7467 0.74669243 4021 Q99543 DNAJC2 DnaJ homolog subfamily C member 2;DnaJ homolog subfamily C member 2, N-terminally processed yes yes 0 0 1 By MS/MS 2 0 1 1 50.935 47.014 3 0.0052048 59030 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 59.57 45.217 14423000 0 0 14423000 0 0 0 0 0 0 0 0 0 0 0 0 54363 4021 48821 456480 360832;360833 360832 2 TYQASSAAFR Unmodified 1100.5251 0.52507234 3626 Q92567 FAM168A Protein FAM168A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 31.864 31.959 2 0.0074908 34749 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 62.338 37.415 50474000 0 0 0 4308000 0 5705800 7137900 7809300 6396900 8402100 0 0 5099800 5614200 0 54364 3626 48822 456481;456482;456483;456484;456485;456486;456487;456488;456489 360834;360835;360836;360837;360838;360839;360840;360841;360842;360843;360844 360838 11 TYQAYHMESVNAEAK Unmodified 1740.7777 0.77773456 2023 P98171 ARHGAP4 Rho GTPase-activating protein 4 yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 44.825 40.279 3 0.021857 50509 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 32.53 26.815 18710000 0 13594000 5115700 0 0 0 0 0 0 0 0 0 0 0 0 54365 2023 48823 456490;456491 360845 360845 1 TYQDIQNTIK Unmodified 1222.6194 0.61936665 1179 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 43.815 43.439 2 0.00090706 55109 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.66 112.75 188110000 0 115220000 0 0 2242000 0 3497000 4691600 0 5206900 11702000 9497400 23439000 0 12615000 54366 1179 48824 456492;456493;456494;456495;456496;456497;456498;456499;456500 360846;360847;360848 360846 3 TYQELLVNQNPIAQPLASR Unmodified 2154.1433 0.14331678 4714 Q9NX24 NHP2 H/ACA ribonucleoprotein complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 82.875 82.938 2;3 2.5223E-10 96074 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 78.088 74.484 331080000 0 0 0 4194200 14641000 19863000 13286000 17110000 17285000 37216000 28413000 33534000 33638000 32047000 79849000 54367 4714 48825 456501;456502;456503;456504;456505;456506;456507;456508;456509;456510;456511;456512;456513;456514;456515;456516;456517;456518;456519;456520;456521;456522;456523;456524 360849;360850;360851;360852;360853;360854;360855;360856;360857;360858;360859;360860;360861;360862;360863;360864;360865;360866;360867 360852 16 TYQGLESLEEVCVYHSGVPIFHEGMK Unmodified 3008.4048 0.40482913 4896 Q9UHD1 CHORDC1 Cysteine and histidine-rich domain-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 93.099 84.969 4 5.1186E-05 110109 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.867 41.992 8557200 8557200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54368 4896 48826 456525 360868 360868 1 TYQLVYFLDK Unmodified 1288.6703 0.67033959 4394 Q9H4A4 RNPEP Aminopeptidase B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.12 3.89 3 1 4 1 2 1 1 1 1 1 88.368 86.107 2 1.1568E-05 108929 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 134.68 113.81 290180000 186030000 53142000 21269000 0 0 0 0 0 0 0 4198100 3851900 0 2975800 18719000 54369 4394 48827 456526;456527;456528;456529;456530;456531;456532;456533 360869;360870;360871;360872;360873;360874;360875;360876;360877;360878;360879 360874 11 TYQNLVIEK Unmodified 1106.5972 0.59717465 1636 P50748 KNTC1 Kinetochore-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 48.465 48.784 2 0.0052093 53943 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.219 42.058 31134000 0 0 0 0 0 0 4674000 5980200 0 0 0 0 8290500 0 12189000 54370 1636 48828 456534;456535;456536;456537;456538;456539;456540;456541 360880;360881;360882;360883;360884;360885;360886;360887 360883 8 TYREIVQEK Unmodified 1164.6139 0.61388734 5054 Q9UPQ0 LIMCH1 LIM and calponin homology domains-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 4 8 2 2 1 1 1 1 1 1 1 1 24.418 22.952 2;3 0.0027301 23289 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 88.056 59.259 566460000 312780000 24381000 0 0 0 18869000 19569000 19232000 12952000 32669000 27351000 49569000 0 0 49090000 54371 5054 48829 456542;456543;456544;456545;456546;456547;456548;456549;456550;456551;456552;456553 360888;360889;360890;360891;360892;360893;360894;360895;360896;360897 360889 6 TYRPLNDVHIK Unmodified 1354.7357 0.73573382 4366 Q9H2H8 PPIL3 Peptidyl-prolyl cis-trans isomerase-like 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 42.868 42.064 3 0.0037533 45100 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.65 44.599 74246000 13433000 0 0 0 0 7159600 0 3144000 0 0 7074900 10009000 0 5604200 27822000 54372 4366 48830 456554;456555;456556;456557;456558;456559;456560 360898;360899 360898 2 TYSAPAINAIQGGSFESPK Unmodified 1936.9531 0.95305639 4401 Q9H4L5 OSBPL3 Oxysterol-binding protein-related protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 6 1 1 1 1 1 1 75.852 75.939 2 1.2303E-05 87220 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 71.548 63.637 41040000 0 0 0 0 5476800 0 0 0 0 7618900 0 8627800 0 4936500 14380000 54373 4401 48831 456561;456562;456563;456564;456565;456566 360900;360901;360902;360903 360901 4 TYSAPAINAIQGGSFESPKK Unmodified 2065.048 0.04801941 4401 Q9H4L5 OSBPL3 Oxysterol-binding protein-related protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 68.94 68.904 3 0.00052109 78955 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 40.952 33.254 31561000 0 0 0 3182000 4007300 0 4641900 0 0 7595800 4722900 0 4190000 3220800 0 54374 4401 48832 456567;456568;456569;456570;456571;456572;456573 360904;360905;360906;360907;360908;360909;360910;360911;360912 360906 9 TYSEFCSR Unmodified 1048.4284 0.42839476 3693 Q92974 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 27.018 27.531 2 0.024768 28584 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.245 49.607 11664000 0 0 0 0 0 0 0 0 0 0 0 0 5022600 0 6641300 54375 3693 48833 456574;456575 360913 360913 1 TYSEFCSRHSK Unmodified 1400.6143 0.61429805 3693 Q92974 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 0 0 1 By MS/MS 2 0 1 1 19.327 14.742 2 0.033125 21522 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.887 64.106 3757100 3757100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54376 3693 48834 456576 360914 360914 1 TYSGPMNK Unmodified 896.4062 0.40620276 3566 Q8WVV4 POF1B Protein POF1B yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 15.237 15.25 2 0.018051 14928 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 64.757 49.536 20181000 0 0 0 14746000 0 0 0 5435400 0 0 0 0 0 0 0 54377 3566 48835 456577;456578 360915 360915 1 TYSLGSALRPSTSR Unmodified 1494.7791 0.77905519 870 P08670 VIM Vimentin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 2 1 2 1 1 3 2 1 2 2 1 2 50.677 50.85 2;3 5.2475E-20 57014 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 139.89 127.97 12398000000 0 0 0 703980000 552150000 1032500000 783980000 816200000 800000000 1033600000 841090000 1845300000 1268000000 845530000 1876200000 54378 870 48836 456579;456580;456581;456582;456583;456584;456585;456586;456587;456588;456589;456590;456591;456592;456593;456594;456595;456596;456597;456598 360916;360917;360918;360919;360920;360921;360922;360923;360924;360925;360926;360927;360928;360929;360930;360931;360932;360933;360934;360935;360936;360937;360938;360939;360940;360941;360942;360943;360944;360945;360946;360947;360948;360949;360950;360951;360952 360932 34 TYSLPEDDDFIK Unmodified 1441.6613 0.66129105 2712 Q567U6 CCDC93 Coiled-coil domain-containing protein 93 yes yes 0 0 0 By MS/MS 2 0 1 1 79.426 74.691 2 0.028852 93076 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 57.785 47.027 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54379 2712 48837 456599 360953 360953 1 TYSLSSSFSSSSSTRK Unmodified 1710.8061 0.8060578 412 O60563 CCNT1 Cyclin-T1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 42.766 42.971 3 8.8869E-07 47720 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 82.59 68.506 110830000 0 0 0 0 4281100 0 7444100 9517500 8502000 8077300 15763000 0 14530000 13722000 28994000 54380 412 48838 456600;456601;456602;456603;456604;456605;456606;456607;456608;456609 360954;360955;360956;360957;360958;360959;360960;360961;360962;360963;360964;360965;360966 360961 13 TYSQDCSFK Unmodified 1134.4652 0.4651742 3143 Q86U86 PBRM1 Protein polybromo-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 22.736 22.775 2 0.0050719 23768 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 84.498 76.93 22187000 0 0 0 2309100 1599300 2743700 2240300 1904100 2137700 4055500 0 0 5197800 0 0 54381 3143 48839 456610;456611;456612;456613;456614;456615;456616;456617 360967;360968;360969 360968 3 TYSTSFTPMYHAVTK Oxidation (M) 1748.808 0.80797206 724 P00390 GSR Glutathione reductase, mitochondrial yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 6 2 2 2 58.397 52.422 2;3 0.002031 71028 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.64 58.407 435860000 203500000 184240000 48124000 0 0 0 0 0 0 0 0 0 0 0 0 54382 724 48840 456618;456619;456620;456621;456622;456623 360970;360971;360972;360973;360974 360973 874 5 TYSTSFTPMYHAVTK Unmodified 1732.8131 0.81305744 724 P00390 GSR Glutathione reductase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6 4 3 3 2 1 1 1 1 66.677 63.543 2;3 2.0187E-06 85441 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 116.24 106.92 571330000 475100000 0 32554000 0 0 0 0 0 0 0 9834800 14554000 0 0 39290000 54383 724 48840 456624;456625;456626;456627;456628;456629 360975;360976;360977;360978 360977 3 TYSVEYLPK Unmodified 1098.5597 0.55972651 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 58.093 58.4 2 0.005264 66055 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 78.516 66.309 67139000 0 0 0 0 0 9219400 0 0 4819400 0 16418000 14115000 8415600 11222000 2929700 54384 487 48841 456630;456631;456632;456633;456634;456635;456636 360979;360980;360981;360982;360983 360983 5 TYSVVPMTSR Oxidation (M) 1155.5594 0.55940893 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 1 2 2 2 2 2 2 2 1 2 38.727 38.881 2 0.0037393 42671 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 67.993 41.609 468120000 0 0 0 27780000 25361000 17743000 38266000 23232000 30350000 46173000 66001000 75532000 50802000 23874000 43008000 54385 1986 48842 456637;456638;456639;456640;456641;456642;456643;456644;456645;456646;456647;456648;456649;456650;456651;456652;456653;456654;456655;456656;456657;456658 360984;360985;360986;360987;360988;360989;360990;360991;360992;360993;360994;360995;360996;360997;360998;360999;361000;361001 360992 3240 12 TYSVVPMTSR Unmodified 1139.5645 0.56449431 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 50.992 51.109 2 0.0023251 57905 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 84.743 67.503 336740000 0 0 0 21729000 0 44894000 30047000 35698000 0 50301000 0 0 48523000 0 105550000 54386 1986 48842 456659;456660;456661;456662;456663;456664;456665 361002;361003;361004;361005 361002 4 TYSYLTPDLWK Unmodified 1385.6867 0.68671794 1027 P15880 RPS2 40S ribosomal protein S2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84.207 83.659 2 1.9235E-05 96823 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 141.88 129.25 1014200000 336740 509690000 0 7479600 13304000 28504000 20317000 43129000 35813000 54008000 40097000 60031000 37003000 50882000 113650000 54387 1027 48843 456666;456667;456668;456669;456670;456671;456672;456673;456674;456675;456676;456677;456678;456679;456680 361006;361007;361008;361009;361010;361011;361012;361013;361014;361015;361016;361017;361018 361007 13 TYTAYVDLEK Unmodified 1201.5867 0.58666954 1740 P54577 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 8.36 3.15 2 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 59.026 58.142 2 0.00011922 74911 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.31 95.487 1169500000 0 944790000 15774000 0 7490200 14224000 13625000 9043200 9248400 13463000 26620000 23066000 11671000 23112000 57345000 54388 1740 48844 456681;456682;456683;456684;456685;456686;456687;456688;456689;456690;456691;456692;456693;456694 361019;361020;361021;361022;361023;361024;361025;361026;361027;361028;361029;361030;361031 361022 13 TYTIANQFPLNK Unmodified 1408.7351 0.73506511 4625 Q9NSD9 FARSB Phenylalanine--tRNA ligase beta subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.42 3.66 3 1 8 1 2 1 1 1 1 1 1 1 1 1 75.147 73.349 2 2.5454E-15 93357 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 185.58 171.89 534020000 128390000 303250000 3835200 0 0 7540600 0 0 0 17923000 18997000 16252000 0 12501000 25330000 54389 4625 48845 456695;456696;456697;456698;456699;456700;456701;456702;456703;456704;456705;456706 361032;361033;361034;361035;361036;361037;361038;361039;361040;361041;361042 361038 11 TYTQLVR Unmodified 879.48142 0.48141661 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.402 34.585 2 0.031725 37501 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 122.98 84.187 389540000 0 0 0 14268000 16166000 28445000 19027000 23423000 20023000 33122000 57135000 47296000 34407000 36126000 60105000 54390 528 48846 456707;456708;456709;456710;456711;456712;456713;456714;456715;456716;456717;456718 361043;361044 361044 1 TYTSQSIHQAVIAEQLAK Unmodified 1987.0375 0.037454724 5047 Q9UP83 COG5 Conserved oligomeric Golgi complex subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 6.36 3.98 5 6 2 1 2 1 1 1 1 1 1 69.385 66.844 2;3 6.1258E-34 88197 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 140.03 125.79 473390000 325230000 93134000 26108000 0 1351500 5753800 2441700 3353800 0 7679000 0 8337200 0 0 0 54391 5047 48847 456719;456720;456721;456722;456723;456724;456725;456726;456727;456728;456729 361045;361046;361047;361048;361049;361050;361051;361052;361053 361051 8 TYTWNTK Unmodified 912.43413 0.43413207 494 O75400 PRPF40A Pre-mRNA-processing factor 40 homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31.149 30.512 2 0.014121 39229 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.29 105.25 705290000 36206000 113700000 0 27597000 22077000 26092000 37983000 43046000 38536000 54128000 55056000 73221000 62788000 52473000 62386000 54392 494 48848 456730;456731;456732;456733;456734;456735;456736;456737;456738;456739;456740;456741;456742;456743 361054;361055;361056;361057;361058;361059;361060;361061;361062 361056 9 TYVDLTNEETTDSTTSK Unmodified 1903.8535 0.85346151 668 O95551 TDP2 Tyrosyl-DNA phosphodiesterase 2 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 48.134 48.53 2 2.6987E-31 53741 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 145.71 139.48 9972600 0 0 0 0 0 2733500 0 0 0 0 0 0 0 0 7239100 54393 668 48849 456744;456745;456746 361063;361064 361063 2 TYVESILEGIK Unmodified 1250.6758 0.6758189 2870 Q6DHV7 ADAL Adenosine deaminase-like protein yes yes 0 0 0 By MS/MS 2 0 1 1 90.787 85.891 2 0.0013273 106749 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.21 75.976 25416000 0 25416000 0 0 0 0 0 0 0 0 0 0 0 0 0 54394 2870 48850 456747 361065 361065 1 TYVISRTEPAMATTK Unmodified 1667.8553 0.8552566 3111 Q7Z6E9 RBBP6 E3 ubiquitin-protein ligase RBBP6 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 52.503 46.491 3 0.00027112 63845 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.81 72.219 24256000 21689000 0 2567600 0 0 0 0 0 0 0 0 0 0 0 0 54395 3111 48851 456748;456749 361066;361067;361068 361066 3 TYVPALEQSADGHK Unmodified 1514.7365 0.73652168 2025 P98175 RBM10 RNA-binding protein 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 45.79 45.233 3 0.0028343 49432 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.409 48.642 7277900 0 0 0 7277900 0 0 0 0 0 0 0 0 0 0 0 54396 2025 48852 456750;456751;456752 361069;361070;361071 361069 3 TYVTQTLLK Unmodified 1065.607 0.60701105 379 O43913 ORC5 Origin recognition complex subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60.116 58.979 2 0.00355 66957 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 89.698 63.804 663500000 141120000 130610000 8755300 0 22879000 29137000 26077000 32002000 24726000 29041000 40398000 56859000 32825000 37006000 52054000 54397 379 48853 456753;456754;456755;456756;456757;456758;456759;456760;456761;456762;456763;456764;456765;456766 361072;361073;361074;361075;361076;361077;361078;361079;361080;361081;361082 361074 10 TYVVTGNMGSNDK Oxidation (M) 1400.6242 0.62419403 2075 Q02413 DSG1 Desmoglein-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.94 22.148 2 3.5135E-08 21811 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 102.52 94.299 545190000 0 0 0 93844000 33417000 38316000 33238000 103420000 24118000 35925000 36398000 58419000 50565000 19673000 17857000 54398 2075 48854 456767;456768;456769;456770;456771;456772;456773;456774;456775;456776;456777;456778 361083;361084;361085;361086;361087;361088;361089;361090;361091;361092;361093;361094 361090 3375 12 TYVVTGNMGSNDK Unmodified 1384.6293 0.62927941 2075 Q02413 DSG1 Desmoglein-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 36.138 36.214 2 1.1777E-28 39944 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 180.07 173.13 431200000 0 0 0 84247000 28356000 0 25329000 117680000 13756000 35552000 35382000 0 60921000 29982000 0 54399 2075 48854 456779;456780;456781;456782;456783;456784;456785;456786;456787;456788;456789;456790 361095;361096;361097;361098;361099;361100;361101;361102;361103;361104;361105 361103 8 TYYYNNR Unmodified 992.43519 0.4351947 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.22 20.422 2 0.021346 20576 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 106.84 95.244 791570000 0 0 0 32646000 44364000 39513000 41676000 37789000 44292000 66753000 105540000 129550000 76419000 86418000 86610000 54400 213 48855 456791;456792;456793;456794;456795;456796;456797;456798;456799;456800;456801;456802 361106;361107;361108;361109;361110;361111;361112;361113;361114;361115;361116;361117;361118;361119;361120 361118 15 TYYYNNRTLESTWEK Unmodified 1966.9061 0.9061062 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 68.537 62.527 3 0.00057396 83278 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.641 56.836 87427000 83460000 0 3966400 0 0 0 0 0 0 0 0 0 0 0 0 54401 213 48856 456803;456804 361121 361121 1 TYYYNTETK Unmodified 1181.5241 0.52406928 494 O75400 PRPF40A Pre-mRNA-processing factor 40 homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.086 27.283 2 0.0032698 29453 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 93.162 76.066 856740000 0 0 0 46484000 39015000 49045000 57848000 49570000 58065000 108550000 81504000 80505000 75343000 75556000 135260000 54402 494 48857 456805;456806;456807;456808;456809;456810;456811;456812;456813;456814;456815;456816 361122;361123;361124;361125;361126;361127;361128;361129;361130;361131;361132 361132 11 VAAAEGGTAAPAQTQAVEK Unmodified 1768.8955 0.89554151 5362 yes yes 0 0 0 By MS/MS 3 0 1 1 99.091 95.74 2 0.02737 114812 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 32.933 6.226 + 12719000 0 12719000 0 0 0 0 0 0 0 0 0 0 0 0 0 54403 5362 48858 456817 361133 361133 1 VAAAESMPLLLECAR Unmodified 1629.8218 0.82184798 149 O00410 IPO5 Importin-5 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 2 1 1 2 2 2 2 2 1 2 83.785 83.9 2;3 0.00021224 96792 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.697 79.164 156240000 0 0 0 0 1165400 18138000 2825200 2510300 6542400 20743000 18379000 21530000 10245000 15767000 38396000 54404 149 48859 456818;456819;456820;456821;456822;456823;456824;456825;456826;456827;456828;456829;456830;456831;456832;456833;456834;456835 361134;361135;361136;361137;361138;361139;361140 361136 7 VAAAGAFAQTLR Unmodified 1174.6459 0.64585618 1142 P22670 RFX1 MHC class II regulatory factor RFX1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 58.868 59.053 2 0.0011685 67265 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 70.1 45.945 45274000 0 0 0 0 2571100 4763500 4160100 3885500 1680200 5512500 4336000 4011400 3331700 3047800 7974200 54405 1142 48860 456836;456837;456838;456839;456840;456841;456842;456843;456844;456845;456846 361141;361142;361143;361144;361145;361146;361147;361148;361149;361150;361151 361141 11 VAAALDDGSALGRFER Unmodified 1646.8376 0.8376327 1097 P19971 TYMP Thymidine phosphorylase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 66.236 66.313 3 1.5399E-05 76097 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 61.732 39.257 149020000 0 0 0 44150000 3299600 15243000 5532300 4768200 0 12509000 10239000 13771000 6281200 7877500 25354000 54406 1097 48861 456847;456848;456849;456850;456851;456852;456853;456854;456855;456856;456857 361152;361153;361154;361155;361156;361157;361158;361159;361160;361161;361162 361152 11 VAAALPGMESTQDR Unmodified 1444.698 0.69802768 1105 P20340 RAB6A Ras-related protein Rab-6A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 53.543 53.395 2 0.0012693 61140 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 75.819 49.881 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54407 1105 48862 456858;456859;456860;456861;456862 361163;361164;361165;361166;361167 361167 5 VAAALPGMESTQDR Oxidation (M) 1460.6929 0.6929423 1105 P20340 RAB6A Ras-related protein Rab-6A yes yes 0 1 0 By MS/MS 10 0 1 1 37.117 37.418 2 0.038721 40388 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 41.54 30.512 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54408 1105 48862 456863 361168 361168 1 VAAALTAMDK Unmodified 989.52157 0.52156686 1097 P19971 TYMP Thymidine phosphorylase yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 42.663 42.48 2 0.022591 48203 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 46.001 14.041 9672000 0 0 0 7678100 0 0 0 0 0 1993800 0 0 0 0 0 54409 1097 48863 456864;456865 361169 361169 1 VAAAMENPNLR Unmodified 1184.5972 0.59719142 4410 Q9H5X1 FAM96A MIP18 family protein FAM96A yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 38.223 38.687 2 0.00093439 41809 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.221 61.552 15833000 0 0 0 0 0 2510100 0 0 0 0 0 3220100 2845600 0 7257700 54410 4410 48864 456866;456867;456868;456869;456870 361170;361171;361172;361173 361171 4 VAAAMPVR Oxidation (M) 829.44801 0.44800799 2320 Q13573 SNW1 SNW domain-containing protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 13.497 13.842 2 0.012851 12489 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.563 50.055 55167000 0 0 0 0 0 0 0 0 7224600 0 0 21812000 0 0 26130000 54411 2320 48865 456871;456872;456873 361174;361175;361176 361174 3786 3 VAAAMPVR Unmodified 813.45309 0.45309337 2320 Q13573 SNW1 SNW domain-containing protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 31.827 31.48 2 0.023412 34875 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 60.358 28.245 11123000 0 0 0 11123000 0 0 0 0 0 0 0 0 0 0 0 54412 2320 48865 456874 361177 361177 1 VAAAMPVRAADK Unmodified 1198.6492 0.64922699 2320 Q13573 SNW1 SNW domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By matching 2 0 5 2 1 2 34.301 29.525 2;3 0.0002503 41095 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 100.02 62.289 166580000 126850000 31621000 8113600 0 0 0 0 0 0 0 0 0 0 0 0 54413 2320 48866 456875;456876;456877;456878;456879 361178;361179 361178 1 VAAASGHCGAFSGSDSSR Unmodified 1722.738 0.73799501 4762 Q9NZB2 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.353 19.55 3 1.5776E-05 19803 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 68.82 64.272 40784000 0 0 0 3280300 2207400 3249000 2741500 2810600 1604100 3358100 2556700 5030400 5135400 4529000 4281000 54414 4762 48867 456880;456881;456882;456883;456884;456885;456886;456887;456888;456889;456890;456891 361180;361181;361182;361183;361184;361185;361186;361187;361188;361189;361190;361191 361188 12 VAAAVPVIISR Unmodified 1094.6812 0.68117905 2455 Q14919 DRAP1 Dr1-associated corepressor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.214 70.29 2 0.00037948 81526 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 87.308 56.234 124530000 0 0 0 7026200 5910100 8256500 10290000 11539000 6146500 13042000 14191000 10669000 11437000 7684800 18335000 54415 2455 48868 456892;456893;456894;456895;456896;456897;456898;456899;456900;456901;456902;456903 361192;361193;361194;361195;361196;361197;361198;361199;361200;361201;361202;361203 361202 12 VAAAVPVIISRALELFLESLLK Unmodified 2351.4192 0.41920428 2455 Q14919 DRAP1 Dr1-associated corepressor yes yes 0 0 1 By MS/MS 1 0 1 1 111.36 116.62 3 2.1173E-06 98311 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 67.43 67.354 13014000 13014000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54416 2455 48869 456904 361204 361204 1 VAADGESREESLIQESASK Unmodified 2004.96 0.95999226 3495 Q8TD16 BICD2 Protein bicaudal D homolog 2 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 50.807 45.945 3 4.9629E-06 59794 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.087 50.266 48125000 0 45135000 2989600 0 0 0 0 0 0 0 0 0 0 0 0 54417 3495 48870 456905;456906;456907 361205;361206;361207 361206 3 VAADLQLSTPQK Unmodified 1269.6929 0.69286595 4407 Q9H582 ZNF644 Zinc finger protein 644 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 55.226 49.411 2 0.0036504 56535 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 91.549 45.951 47631000 0 47631000 0 0 0 0 0 0 0 0 0 0 0 0 0 54418 4407 48871 456908;456909 361208;361209 361209 2 VAAEFSSRK Unmodified 993.52434 0.52434406 3310 Q8N1B4 VPS52 Vacuolar protein sorting-associated protein 52 homolog yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 15.415 12.556 2 0.027448 16349 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.19 65.039 40748000 0 38120000 2628000 0 0 0 0 0 0 0 0 0 0 0 0 54419 3310 48872 456910;456911 361210 361210 1 VAAEILGIK Unmodified 912.56442 0.56441796 1650 P51157 RAB28 Ras-related protein Rab-28 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 72.286 66.44 2 0.0072815 84483 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.374 52.072 50643000 17428000 29596000 3619100 0 0 0 0 0 0 0 0 0 0 0 0 54420 1650 48873 456912;456913;456914 361211;361212 361211 2 VAAENALSVAEEQIR Unmodified 1598.8264 0.82639932 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 1 2 2 2 2 2 2 2 2 2 2 2 77.06 77.143 2;3 2.8583E-19 89098 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 138.24 78.694 166470000 0 0 0 1731000 7639200 10501000 11064000 10847000 10321000 21046000 14585000 19155000 13269000 11357000 34957000 54421 2446 48874 456915;456916;456917;456918;456919;456920;456921;456922;456923;456924;456925;456926;456927;456928;456929;456930;456931;456932;456933;456934;456935;456936;456937 361213;361214;361215;361216;361217;361218;361219;361220;361221;361222;361223;361224;361225;361226;361227;361228 361214 9 VAAEPPDGPAR Unmodified 1078.5407 0.5407224 4747 Q9NYP3 DONSON Protein downstream neighbor of Son yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 23.393 23.722 2 0.01341 24552 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 62.823 33.674 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54422 4747 48875 456938;456939;456940 361229;361230;361231 361230 3 VAAERATSVYLVQK Unmodified 1533.8515 0.85149185 3281 Q8IYB7 DIS3L2 DIS3-like exonuclease 2 yes yes 0 0 1 By MS/MS 2 0 1 1 54.651 46.542 3 0.00039616 63922 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.287 47.497 21881000 21881000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54423 3281 48876 456941 361232;361233 361233 2 VAAETQSPSLFGSTK Unmodified 1521.7675 0.76748745 4978 Q9UKX7 NUP50 Nuclear pore complex protein Nup50 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.42 3.66 3 1 8 2 2 1 1 1 1 1 1 1 1 55.964 55.035 2 5.5147E-82 67496 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 206.58 181.74 372590000 0 211380000 0 0 0 21162000 0 0 13197000 31377000 20921000 23627000 21998000 0 28931000 54424 4978 48877 456942;456943;456944;456945;456946;456947;456948;456949;456950;456951;456952;456953 361234;361235;361236;361237;361238;361239;361240;361241;361242;361243;361244;361245;361246 361239 13 VAAGAQIHQSLLCDNAEVK Unmodified 2023.0157 0.015673424 2241 Q13144 EIF2B5 Translation initiation factor eIF-2B subunit epsilon yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 56.917 57.275 3 1.9424E-06 64385 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.779 56.68 64893000 0 0 0 0 0 0 0 0 0 5508500 7522500 6764100 18280000 14402000 12416000 54425 2241 48878 456954;456955;456956;456957;456958;456959 361247;361248;361249;361250 361247 2 VAAGLQIK Unmodified 798.49634 0.49633839 2457 Q14974 KPNB1 Importin subunit beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.889 37.069 2 0.0058497 41658 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 105.27 56.058 775900000 0 0 0 35221000 27153000 59506000 46044000 41179000 27219000 73643000 78624000 98710000 80160000 56811000 151630000 54426 2457 48879 456960;456961;456962;456963;456964;456965;456966;456967;456968;456969;456970;456971 361251;361252;361253;361254;361255;361256;361257;361258;361259;361260;361261;361262 361261 12 VAAGTLDASTK Unmodified 1032.5451 0.54513908 2467 Q15003 NCAPH Condensin complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22.678 22.345 2 6.0011E-09 23415 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 138.66 84.11 698410000 0 321360000 2199400 15759000 13586000 25819000 18686000 18286000 15829000 36840000 47844000 62602000 34225000 35655000 49725000 54427 2467 48880 456972;456973;456974;456975;456976;456977;456978;456979;456980;456981;456982;456983;456984;456985 361263;361264;361265;361266;361267;361268;361269;361270;361271;361272;361273;361274 361264 10 VAAGVLCELAQDK Unmodified 1372.7021 0.70205043 1010;1341 P14923;P35222 JUP;CTNNB1 Junction plakoglobin;Catenin beta-1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 73.717 73.776 2 7.0048E-08 84927 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 99.174 61.699 368490000 0 0 0 135070000 19300000 19377000 0 21884000 13093000 30785000 28662000 25162000 35240000 22350000 17566000 54428 1010;1341 48881 456986;456987;456988;456989;456990;456991;456992;456993;456994;456995;456996 361275;361276;361277;361278;361279;361280;361281;361282;361283;361284;361285 361283 5 VAAHEAEEESDNIAEDFLEGK Unmodified 2302.0237 0.023714733 3434 Q8NEZ2 VPS37A Vacuolar protein sorting-associated protein 37A yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 85.075 79.385 3 0.00091176 101824 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.424 40.724 20104000 17172000 2932200 0 0 0 0 0 0 0 0 0 0 0 0 0 54429 3434 48882 456997;456998 361286;361287;361288 361288 3 VAAIEALNDGELQK Unmodified 1469.7726 0.77257283 1625 P50502;Q8IZP2 ST13;ST13P4 Hsc70-interacting protein;Putative protein FAM10A4 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.78 3.84 13 4 24 4 11 2 2 2 2 2 2 2 2 2 2 2 2 2 66.673 64.78 2;3 9.6988E-33 76159 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 199.68 162.33 9362900000 226070000 7099000000 69134000 56498000 61675000 82921000 99694000 81613000 70295000 161480000 286030000 242730000 102180000 198080000 525540000 54430 1625 48883 456999;457000;457001;457002;457003;457004;457005;457006;457007;457008;457009;457010;457011;457012;457013;457014;457015;457016;457017;457018;457019;457020;457021;457022;457023;457024;457025;457026;457027;457028;457029;457030;457031;457032;457033;457034;457035;457036;457037;457038;457039 361289;361290;361291;361292;361293;361294;361295;361296;361297;361298;361299;361300;361301;361302;361303;361304;361305;361306;361307;361308;361309;361310;361311;361312;361313;361314;361315;361316;361317 361290 24 VAAIEATGAVIHFGNGK Unmodified 1653.8839 0.88385462 3204 Q86Y56 DNAAF5 Dynein assembly factor 5, axonemal yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 73.245 73.43 3 0.00022317 83941 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.732 50.258 61846000 0 0 0 0 0 9597300 0 9737500 0 7619300 0 19870000 0 0 15022000 54431 3204 48884 457040;457041;457042;457043;457044 361318;361319;361320;361321 361319 4 VAAIQQILGK Unmodified 1039.639 0.63897988 2947 Q6PGP7 TTC37 Tetratricopeptide repeat protein 37 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 72.243 71.961 2 0.0032859 82780 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 77.046 49.792 63290000 0 18438000 0 0 1998500 5017800 2807800 2751300 2225000 5499800 3894500 4025200 2971600 4586700 9074100 54432 2947 48885 457045;457046;457047;457048;457049;457050;457051;457052;457053;457054;457055;457056 361322;361323;361324;361325;361326;361327;361328;361329;361330;361331;361332;361333 361322 12 VAALAASPASVAVDSGSELNSR Unmodified 2071.0546 0.054561351 255 O15119 TBX3 T-box transcription factor TBX3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 22 2 2 2 2 2 2 2 2 1 2 2 1 73.775 73.817 2;3 1.9897E-54 85295 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 135.37 119.28 514040000 0 0 0 23395000 40356000 54583000 39929000 43874000 42466000 46780000 56513000 36944000 56239000 46862000 26099000 54433 255 48886 457057;457058;457059;457060;457061;457062;457063;457064;457065;457066;457067;457068;457069;457070;457071;457072;457073;457074;457075;457076;457077;457078 361334;361335;361336;361337;361338;361339;361340;361341;361342;361343;361344;361345;361346 361342 10 VAALAEGEPEGPWMDVGQGPGLER Oxidation (M) 2480.1642 0.16418816 904 P0CW18 PRSS56 Serine protease 56 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 2 1 1 1 1 1 1 1 1 1 1 81.229 81.302 2;3 6.8316E-45 94083 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 109.08 105.05 109200000 0 0 0 0 12750000 11282000 7461100 11245000 7142900 12678000 7007700 11603000 6482400 7671400 13874000 54434 904 48887 457079;457080;457081;457082;457083;457084;457085;457086;457087;457088;457089;457090 361347;361348;361349;361350;361351;361352;361353;361354;361355;361356;361357;361358;361359;361360;361361;361362 361348 1164 16 VAALAEGEPEGPWMDVGQGPGLER Unmodified 2464.1693 0.16927353 904 P0CW18 PRSS56 Serine protease 56 yes yes 0 0 0 By MS/MS 10 0 1 1 85.205 85.373 3 5.5221E-15 98581 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.646 61.186 11897000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11897000 54435 904 48887 457091 361363 361363 1 VAALEIEK Unmodified 871.50148 0.50148335 2167 Q08AM6 VAC14 Protein VAC14 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.247 42.424 2 0.015851 48079 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 68.214 26.322 145500000 0 0 0 8948700 8767300 10068000 10336000 11693000 7767500 13361000 12863000 19153000 12865000 12621000 17054000 54436 2167 48888 457092;457093;457094;457095;457096;457097;457098;457099;457100;457101;457102;457103 361364;361365;361366;361367;361368;361369;361370;361371;361372;361373 361373 10 VAALEQQVLMLTK Oxidation (M) 1458.8116 0.81160087 4255 Q9BYX2 TBC1D2 TBC1 domain family member 2A yes yes 0 1 0 By MS/MS 2 0 1 1 87.802 82.96 2 0.0037022 103173 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.672 47.679 9613700 0 9613700 0 0 0 0 0 0 0 0 0 0 0 0 0 54437 4255 48889 457104 361374 361374 5719 1 VAALEQQVLMLTK Unmodified 1442.8167 0.81668625 4255 Q9BYX2 TBC1D2 TBC1 domain family member 2A yes yes 0 0 0 By MS/MS 2 0 1 1 91.149 86.253 2 2.1165E-33 107174 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 172.34 145.66 31283000 0 31283000 0 0 0 0 0 0 0 0 0 0 0 0 0 54438 4255 48889 457105 361375 361375 1 VAALGLDPDK Unmodified 997.54441 0.5444108 3059 Q7L8W6 DPH6 Diphthine--ammonia ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.25 3.34 2 1 1 1 2 1 53.869 49.328 2 0.0032899 63763 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.331 61.523 188730000 9126800 173110000 0 0 0 0 0 0 0 0 0 0 0 0 6492800 54439 3059 48890 457106;457107;457108;457109 361376;361377;361378;361379 361376 4 VAALGNDPLAR Unmodified 1095.6037 0.60365701 1736 P54259 ATN1 Atrophin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 2 1 1 1 1 1 1 1 1 1 52.853 52.995 2 0.00027892 59151 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 92.838 54.678 339650000 0 0 0 7731900 6350600 23272000 12215000 6726300 24655000 36851000 53384000 38800000 44568000 19422000 65672000 54440 1736 48891 457110;457111;457112;457113;457114;457115;457116;457117;457118;457119;457120;457121;457122 361380;361381;361382;361383;361384;361385;361386;361387;361388;361389;361390;361391;361392 361390 13 VAALQNLVK Unmodified 954.58622 0.58621603 2457 Q14974 KPNB1 Importin subunit beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.412 59.522 2 0.0030241 67882 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 102.77 49.988 839410000 0 0 0 44189000 38623000 80716000 53218000 45240000 29285000 70883000 95253000 75282000 69832000 77838000 159050000 54441 2457 48892 457123;457124;457125;457126;457127;457128;457129;457130;457131;457132;457133;457134 361393;361394;361395;361396;361397;361398;361399;361400;361401;361402;361403;361404;361405;361406;361407;361408;361409 361396 17 VAALQTAADAFYK Unmodified 1367.7085 0.70851601 4359 Q9H269 VPS16 Vacuolar protein sorting-associated protein 16 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 75.051 75.122 2 0.00063682 86582 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 93.096 76.425 51952000 0 0 0 0 3604600 7110900 5685000 5605100 4086500 9166900 0 10690000 6003000 0 0 54442 4359 48893 457135;457136;457137;457138;457139;457140;457141;457142 361410;361411;361412;361413;361414;361415;361416;361417 361414 8 VAALSGDAR Unmodified 858.45593 0.45593014 2282 Q13415 ORC1 Origin recognition complex subunit 1 yes yes 0 0 0 By MS/MS 10 0 1 1 17.161 17.715 2 0.036457 17204 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 45.68 7.5468 207720000 0 0 0 0 0 0 0 0 0 0 0 207720000 0 0 0 54443 2282 48894 457143 361418 361418 1 VAALTGLPFVTAPNK Unmodified 1497.8555 0.8555146 854 P07954 FH Fumarate hydratase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 87.38 86.181 2 3.0879E-06 108628 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 119.76 94.105 336940000 67337000 166600000 1485400 2185400 2453000 3341800 2370100 3397900 1995300 0 13402000 8684000 2469900 8580800 52633000 54444 854 48895 457144;457145;457146;457147;457148;457149;457150;457151;457152;457153;457154;457155;457156;457157;457158 361419;361420;361421;361422;361423;361424;361425;361426;361427;361428;361429;361430;361431;361432;361433 361425 15 VAAMSVAQR Oxidation (M) 947.48585 0.48585006 295 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes yes 0 1 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.292 12.44 2 0.0093792 11661 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 58.596 20.177 21033000 0 0 0 1349200 932340 1600400 1571800 1049700 1058600 2073900 2367200 2701600 1769300 1860700 2698700 54445 295 48896 457159;457160;457161;457162;457163;457164;457165;457166;457167;457168;457169;457170 361434 361434 381 1 VAANAVDPK Unmodified 883.47633 0.47633123 2555 Q15642 TRIP10 Cdc42-interacting protein 4 yes yes 0 0 0 By MS/MS By MS/MS 2.67 0.471 1 2 1 2 17.811 14.047 2 0.0064931 18224 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.28 85.902 69967000 206870 69760000 0 0 0 0 0 0 0 0 0 0 0 0 0 54446 2555 48897 457171;457172;457173 361435 361435 0 VAAPDVVVPTLDTVR Unmodified 1550.8668 0.86680757 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.862 81.923 2 3.9759E-07 94531 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 88.441 75.485 200000000 0 0 0 8133600 12325000 19406000 13723000 16320000 8570300 23469000 17509000 21252000 12350000 19425000 27520000 54447 2392 48898 457174;457175;457176;457177;457178;457179;457180;457181;457182;457183;457184;457185 361436;361437;361438;361439;361440;361441;361442;361443;361444;361445;361446;361447;361448 361438 13 VAAPVGPVGPTPTVLPMGAPVPR Unmodified 2179.2187 0.21873033 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 0 0 By MS/MS 10 0 1 1 87.749 87.899 3 0.035398 101704 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 18.509 10.97 2600600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2600600 54448 2290 48899 457186 361449 361449 1 VAAPVGPVGPTPTVLPMGAPVPRPR Oxidation (M) 2448.3675 0.36751983 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.618 79.677 3 4.9509E-19 92261 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 75.112 71.13 514490000 0 0 0 18601000 31155000 41766000 34356000 45451000 37050000 47707000 33241000 84463000 40015000 32970000 67714000 54449 2290 48900 457187;457188;457189;457190;457191;457192;457193;457194;457195;457196;457197;457198 361450;361451;361452;361453;361454;361455;361456;361457;361458;361459;361460;361461;361462 361461 3745 13 VAAPVGPVGPTPTVLPMGAPVPRPR Unmodified 2432.3726 0.37260521 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 83.763 83.851 3 1.4763E-06 96964 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 44.258 36.454 95245000 0 0 0 0 4470500 5560300 0 10492000 0 9176100 7835000 16156000 3636900 5842000 32076000 54450 2290 48900 457199;457200;457201;457202;457203;457204;457205;457206;457207 361463;361464;361465;361466;361467;361468;361469;361470;361471 361466 9 VAAQNLIQNTNIDNGQK Unmodified 1839.9439 0.94388869 4720 Q9NX70 MED29 Mediator of RNA polymerase II transcription subunit 29 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.25 2.26 1 1 18 2 1 1 1 2 1 1 2 2 1 2 2 2 58.449 58.066 2;3 1.5232E-62 73112 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 206.1 194.84 216640000 0 41865000 0 5539300 6447200 7186200 19240000 9389000 9827800 15449000 21437000 15255000 21809000 13776000 29423000 54451 4720 48901 457208;457209;457210;457211;457212;457213;457214;457215;457216;457217;457218;457219;457220;457221;457222;457223;457224;457225;457226;457227 361472;361473;361474;361475;361476;361477;361478;361479;361480;361481;361482;361483;361484;361485;361486;361487;361488 361476 16 VAASCGAIQYIPTELDQVRK Unmodified 2218.1416 0.14160222 3046 Q7L2H7 EIF3M Eukaryotic translation initiation factor 3 subunit M yes yes 0 0 1 By MS/MS 2 0 1 1 84.091 79.371 3 0.031852 98711 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 23.215 9.1991 22003000 0 22003000 0 0 0 0 0 0 0 0 0 0 0 0 0 54452 3046 48902 457228 361489 361489 1 VAASEEQEFAEGFVK Unmodified 1639.773 0.77296676 1054 P17535 JUND Transcription factor jun-D yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 8.15 3.37 3 10 1 2 1 1 1 1 1 1 1 1 1 1 75.196 74.429 2;3 1.419E-30 86062 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 145.55 125.25 363210000 0 261730000 0 6834100 7810900 9042500 11614000 10186000 9926000 16942000 1813600 17226000 10087000 0 0 54453 1054 48903 457229;457230;457231;457232;457233;457234;457235;457236;457237;457238;457239;457240;457241 361490;361491;361492;361493;361494;361495;361496;361497 361497 7 VAASIGNAQK Unmodified 957.52434 0.52434406 119 O00151 PDLIM1 PDZ and LIM domain protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.14 3.85 1 3 1 9 2 2 1 1 1 1 1 1 1 1 1 1 23.132 22.53 2 1.571E-11 18811 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 160.63 93.596 1174600000 153100000 875850000 5757900 12808000 7287900 9194800 12521000 12493000 6539900 8059400 0 0 17223000 53774000 0 54454 119 48904 457242;457243;457244;457245;457246;457247;457248;457249;457250;457251;457252;457253;457254;457255 361498;361499;361500;361501;361502;361503;361504;361505;361506;361507;361508;361509;361510;361511;361512 361504 15 VAASNIVQMK Oxidation (M) 1075.5696 0.56957969 1589 P49721 PSMB2 Proteasome subunit beta type-2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 2 1 2 2 28.943 29.131 2 6.8565E-10 30616 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 154.12 129.92 453210000 0 0 0 44347000 19173000 20685000 16904000 20305000 16219000 26017000 66571000 71149000 9870800 43376000 98595000 54455 1589 48905 457256;457257;457258;457259;457260;457261;457262;457263;457264;457265;457266;457267;457268;457269;457270;457271;457272;457273;457274;457275;457276;457277;457278 361513;361514;361515;361516;361517;361518;361519;361520;361521;361522;361523;361524;361525;361526;361527;361528;361529;361530;361531;361532;361533;361534;361535;361536 361521 2555 16 VAASNIVQMK Unmodified 1059.5747 0.57466507 1589 P49721 PSMB2 Proteasome subunit beta type-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 44.988 45.159 2 0.00028607 50331 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 139.97 98.318 428170000 0 0 0 23441000 11417000 11807000 12022000 13475000 6410400 18491000 58552000 50563000 15779000 42704000 163500000 54456 1589 48905 457279;457280;457281;457282;457283;457284;457285;457286;457287;457288;457289;457290 361537;361538;361539;361540;361541;361542;361543;361544;361545;361546;361547;361548;361549;361550 361542 14 VAASTQPLGR Unmodified 998.55089 0.55089316 3414 Q8ND24 RNF214 RING finger protein 214 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.619 23.824 2 0.00043282 25666 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 136.8 85.01 248570000 0 0 0 19662000 17648000 18736000 17699000 18169000 13176000 21006000 17082000 24487000 26333000 22570000 32003000 54457 3414 48906 457291;457292;457293;457294;457295;457296;457297;457298;457299;457300;457301;457302 361551;361552;361553;361554;361555;361556;361557 361551 6 VAATRQEIFQEQLAAVPEFR Unmodified 2302.207 0.20697967 5267 Q9Y678 COPG1 Coatomer subunit gamma-1 yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 82.646 82.797 3 0.0012486 95419 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.935 32.11 20539000 0 0 0 0 0 0 0 0 0 4018000 0 0 0 0 16521000 54458 5267 48907 457303;457304 361558 361558 1 VAAVGPYIQSSTMPR Oxidation (M) 1591.8028 0.8028271 2333 Q13625 TP53BP2 Apoptosis-stimulating of p53 protein 2 yes yes 0 1 0 By matching By MS/MS By MS/MS By matching By matching By matching 10 0 6 1 1 1 1 1 1 55.477 55.599 2 0.0021058 63089 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 44.847 29.703 15154000 0 0 0 1915800 0 0 3274300 0 0 2671700 4839600 0 0 0 2452700 54459 2333 48908 457305;457306;457307;457308;457309;457310 361559;361560 361560 3804 2 VAAWVEALR Unmodified 1013.5658 0.56581494 4733 Q9NXV6 CDKN2AIP CDKN2A-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 74.946 75.032 2 0.0079891 86501 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 70.919 52.188 45282000 0 0 0 1693600 0 5095900 2070000 2949600 3889200 5444400 5472300 0 4792400 4832400 9042400 54460 4733 48909 457311;457312;457313;457314;457315;457316;457317;457318;457319;457320;457321 361561;361562;361563;361564;361565;361566;361567;361568;361569;361570;361571 361561 11 VAAYAAQLEQYQK Unmodified 1481.7514 0.75144346 4342 Q9H115 NAPB Beta-soluble NSF attachment protein yes yes 0 0 0 By MS/MS 2 0 1 1 64.573 58.656 2 4.6644E-22 75145 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 180.67 144.15 11145000 0 11145000 0 0 0 0 0 0 0 0 0 0 0 0 0 54461 4342 48910 457322 361572 361572 1 VACAEEWQESRTEGEHSK Unmodified 2131.9229 0.92289525 529 O75663 TIPRL TIP41-like protein yes yes 0 0 1 By MS/MS By MS/MS 2 0 4 2 2 32.106 27.49 3;4 4.0833E-10 38500 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 102.78 98.935 81712000 36960000 0 44752000 0 0 0 0 0 0 0 0 0 0 0 0 54462 529 48911 457323;457324;457325;457326 361573;361574;361575;361576 361573 4 VACETVAK Unmodified 876.4375 0.43750288 1297 P31153 MAT2A S-adenosylmethionine synthase isoform type-2 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 8 3.48 1 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16.108 15.94 2 0.0074129 93480 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 130.77 85.792 323620000 197080000 11353000 6349800 4717400 4837400 6168000 6486500 5922000 3800100 6666600 2312000 18202000 7284100 10967000 31482000 54463 1297 48912 457327;457328;457329;457330;457331;457332;457333;457334;457335;457336;457337;457338;457339;457340;457341;457342 361577;361578;361579;361580;361581;361582;361583 361580 2 VACIGAWHPAR Unmodified 1236.6186 0.61859557 1402 P39023;Q92901 RPL3;RPL3L 60S ribosomal protein L3;60S ribosomal protein L3-like yes no 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 45.961 46.324 3 0.0062725 50865 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.108 39.182 64725000 0 0 0 0 0 0 4991500 5411000 0 7908600 7863700 14095000 10996000 5872300 7587700 54464 1402 48913 457343;457344;457345;457346;457347;457348;457349;457350 361584;361585;361586 361584 3 VADAATEVQHK Unmodified 1167.5884 0.58840088 2759 Q5SW79 CEP170 Centrosomal protein of 170 kDa yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.9 2.69 2 1 18 3 2 2 1 1 1 2 1 2 2 1 2 1 12.419 12.065 2;3 5.3638E-10 15168 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 149.27 130.17 358180000 0 239610000 0 13519000 15915000 2939600 1756700 1433400 13599000 2918000 13895000 26445000 2775000 17283000 6093500 54465 2759 48914 457351;457352;457353;457354;457355;457356;457357;457358;457359;457360;457361;457362;457363;457364;457365;457366;457367;457368;457369;457370;457371 361587;361588;361589;361590;361591;361592;361593;361594;361595;361596;361597;361598;361599;361600 361590 13 VADADPASAPSQGALQGR Unmodified 1709.8333 0.83327561 905 P0DI83 RAB34 Ras-related protein Rab-34, isoform NARR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.22 40.399 2 2.0656E-53 43862 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 193.81 162.63 290110000 0 0 0 17805000 20493000 24824000 20235000 20724000 21811000 22079000 32874000 41262000 17708000 23346000 26951000 54466 905 48915 457372;457373;457374;457375;457376;457377;457378;457379;457380;457381;457382;457383 361601;361602;361603;361604;361605;361606;361607;361608;361609;361610;361611;361612 361608 12 VADEDDVDNEEAALLHEEATMTIEELLTRYGQNCHK Unmodified 4157.8794 0.87938204 275 O15355 PPM1G Protein phosphatase 1G yes yes 0 0 1 By MS/MS 2 0 1 1 99.987 91.856 5 3.9068E-118 118343 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 128.89 125.08 21240000 21240000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54467 275 48916 457384 361613 361613 1 VADEISFR Unmodified 935.47125 0.47124585 4442 Q9H814 PHAX Phosphorylated adapter RNA export protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 47.984 48.117 2 0.01266 53027 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 74.127 42.192 91167000 0 0 0 0 11718000 0 11954000 0 9542900 0 0 32286000 0 25666000 0 54468 4442 48917 457385;457386;457387;457388;457389;457390;457391 361614;361615;361616;361617;361618 361616 5 VADFGLSR Unmodified 863.45012 0.45011648 1462;731 P00519;P42684 ABL1;ABL2 Tyrosine-protein kinase ABL1;Abelson tyrosine-protein kinase 2 no no 0 0 0 By MS/MS 10 0 1 1 45.62 45.869 2 0.039837 50598 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 81.119 14.981 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54469 731;1462 48918 457392 361619 361619 1 VADFGLVRPLGGAR Unmodified 1426.8045 0.80448208 2297 Q13470 TNK1 Non-receptor tyrosine-protein kinase TNK1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 72.102 72.154 3 0.0018123 82225 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.594 24.963 68013000 0 0 0 4059500 2704500 9635000 0 0 6375100 6203400 5585300 9487700 4770500 6192700 12999000 54470 2297 48919 457393;457394;457395;457396;457397;457398;457399;457400;457401;457402 361620;361621;361622 361620 3 VADGGGAGGTFQPYLDTLR Unmodified 1893.9221 0.92209062 5240 Q9Y5M8 SRPRB Signal recognition particle receptor subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 80.871 80.974 2 4.0352E-12 93357 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 117.2 111.23 50300000 0 0 0 0 2742600 4164100 2802500 4104600 2444100 6244600 5513000 4858300 3751900 4671200 9003200 54471 5240 48920 457403;457404;457405;457406;457407;457408;457409;457410;457411;457412;457413 361623;361624;361625;361626;361627;361628;361629;361630;361631;361632;361633 361626 11 VADGLPLAASMQEDEQSGR Oxidation (M) 1988.9109 0.91093358 492 O75396 SEC22B Vesicle-trafficking protein SEC22b yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 57.941 58.022 2 7.4525E-12 66070 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 86.944 81.56 41374000 0 0 0 0 5105300 0 6807600 0 0 0 0 20352000 0 9109600 0 54472 492 48921 457414;457415;457416;457417;457418;457419 361634;361635;361636;361637;361638;361639;361640 361635 638 7 VADGLPLAASMQEDEQSGR Unmodified 1972.916 0.91601896 492 O75396 SEC22B Vesicle-trafficking protein SEC22b yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 72.839 73.048 2 1.6483E-12 84049 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 85.42 77.876 20143000 0 0 0 0 0 0 0 0 0 0 0 0 4907900 4879400 10355000 54473 492 48921 457420;457421;457422;457423;457424 361641;361642;361643;361644;361645 361645 5 VADGLPLAASMQEDEQSGRDLQQYQSQAK Oxidation (M) 3178.4837 0.48368439 492 O75396 SEC22B Vesicle-trafficking protein SEC22b yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 67.987 68.138 3 1.4245E-15 77535 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.662 50.995 124850000 0 0 0 0 20352000 0 0 0 17521000 24840000 0 27436000 0 16060000 18644000 54474 492 48922 457425;457426;457427;457428;457429;457430 361646;361647;361648;361649;361650;361651;361652 361647 638 7 VADGLPLAASMQEDEQSGRDLQQYQSQAK Unmodified 3162.4888 0.48876977 492 O75396 SEC22B Vesicle-trafficking protein SEC22b yes yes 0 0 1 By MS/MS 10 0 1 1 76.32 76.492 3 0.0043278 87939 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 21.925 19.475 5178500 0 0 0 0 0 0 0 0 5178500 0 0 0 0 0 0 54475 492 48922 457431 361653 361653 1 VADIGLAAWGR Unmodified 1127.6087 0.60874239 1164 P23526 AHCY Adenosylhomocysteinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.264 76.297 2 3.1846E-05 87405 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 117.89 91.667 152860000 0 0 0 7323900 2448800 5599100 3214300 0 0 4515100 20787000 20242000 4809700 15719000 68200000 54476 1164 48923 457432;457433;457434;457435;457436;457437;457438;457439;457440;457441;457442 361654;361655;361656;361657;361658;361659;361660;361661;361662;361663;361664 361657 11 VADIGLAAWGRK Unmodified 1255.7037 0.70370541 1164 P23526 AHCY Adenosylhomocysteinase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 66.154 65.607 3 9.8501E-05 73879 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.417 70.148 124190000 33423000 0 0 3112400 0 2698700 2566500 2942400 2677500 2292600 11196000 9223800 4067800 8997200 40990000 54477 1164 48924 457443;457444;457445;457446;457447;457448;457449;457450;457451;457452;457453;457454 361665;361666;361667;361668;361669;361670;361671;361672 361666 8 VADISGDTQK Unmodified 1032.5088 0.50875357 3039 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.593 14.757 2 0.0015118 13684 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.601 35.097 535310000 0 0 0 20877000 14022000 57729000 27505000 19291000 21317000 58411000 67877000 52470000 32073000 50581000 113160000 54478 3039 48925 457455;457456;457457;457458;457459;457460;457461;457462;457463;457464;457465;457466 361673;361674;361675;361676;361677;361678;361679 361675 6 VADLILEK Unmodified 899.53278 0.53278348 3892 Q96JG6 CCDC132 Coiled-coil domain-containing protein 132 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.12 3 13 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 56.416 55.402 2 0.011957 61329 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.738 22.184 200440000 3728700 61862000 3526500 7285000 9268900 13417000 9239000 9189100 7492600 13415000 12263000 11947000 11895000 9733400 16177000 54479 3892 48926 457467;457468;457469;457470;457471;457472;457473;457474;457475;457476;457477;457478;457479;457480;457481;457482 361680;361681;361682;361683;361684;361685;361686;361687;361688 361682 9 VADLRLK Unmodified 813.50724 0.50723743 4578 Q9NQW7 XPNPEP1 Xaa-Pro aminopeptidase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 34.612 29.794 2 0.025689 41916 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 159.19 16.563 202650000 160310000 28114000 14232000 0 0 0 0 0 0 0 0 0 0 0 0 54480 4578 48927 457483;457484;457485 361689 361689 1 VADLTEQYNEQYGAVR Unmodified 1854.8748 0.87480607 4209 Q9BWF3 RBM4 RNA-binding protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.824 59.931 2 9.9912E-42 67625 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 201.46 178.54 271890000 0 0 0 16604000 15304000 16895000 19237000 16206000 16618000 26772000 25498000 24117000 26600000 24822000 43218000 54481 4209 48928 457486;457487;457488;457489;457490;457491;457492;457493;457494;457495;457496;457497 361690;361691;361692;361693;361694;361695;361696;361697;361698;361699;361700;361701 361693 12 VADMALHYANK Oxidation (M) 1247.5969 0.59685707 1641 P50990 CCT8 T-complex protein 1 subunit theta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 5.21 3.87 18 2 13 9 5 6 2 1 1 2 1 1 1 1 1 1 1 29.792 27.727 2;3 9.4682E-23 37424 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 187.22 168.44 3694100000 661900000 1257200000 1162600000 38980000 33053000 67878000 0 38813000 28538000 57249000 94074000 59415000 48979000 56814000 88684000 54482 1641 48929 457498;457499;457500;457501;457502;457503;457504;457505;457506;457507;457508;457509;457510;457511;457512;457513;457514;457515;457516;457517;457518;457519;457520;457521;457522;457523;457524;457525;457526;457527;457528;457529;457530 361702;361703;361704;361705;361706;361707;361708;361709;361710;361711;361712;361713;361714;361715;361716;361717;361718;361719;361720;361721;361722;361723;361724;361725;361726;361727;361728;361729;361730;361731;361732;361733;361734;361735;361736;361737 361719 2640 31 VADMALHYANK Unmodified 1231.6019 0.60194245 1641 P50990 CCT8 T-complex protein 1 subunit theta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.4 6 2 23 3 3 2 2 1 2 2 2 2 2 2 2 2 2 2 40.904 39.655 2;3 1.6072E-35 54515 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 200.05 155.6 5429400000 1295600000 696930000 1280700000 76228000 63314000 192640000 98924000 100440000 98733000 214060000 258150000 222680000 172570000 183900000 474450000 54483 1641 48929 457531;457532;457533;457534;457535;457536;457537;457538;457539;457540;457541;457542;457543;457544;457545;457546;457547;457548;457549;457550;457551;457552;457553;457554;457555;457556;457557;457558;457559;457560;457561 361738;361739;361740;361741;361742;361743;361744;361745;361746;361747;361748;361749;361750;361751;361752;361753;361754;361755;361756;361757;361758;361759;361760;361761;361762;361763;361764;361765;361766;361767;361768;361769;361770;361771;361772;361773;361774;361775;361776;361777;361778;361779 361755 30 VADMATNTR Unmodified 977.46003 0.46002924 3035 Q765P7 MTSS1L MTSS1-like protein no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 13.867 14.077 2 0.011616 13558 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 62.546 38.574 9400700 0 0 0 0 0 1609800 0 2065700 0 0 2764700 0 2960500 0 0 54484 3035 48930 457562;457563;457564;457565;457566;457567 361780;361781;361782;361783;361784 361780 5 VADNLAIQLAAVTEDK Unmodified 1669.8887 0.88866522 2207 Q12906 ILF3 Interleukin enhancer-binding factor 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 4.69 3.56 6 3 4 1 6 2 1 1 1 1 88.517 85.446 2;3 4.0741E-31 106600 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 161.48 114.18 768530000 11343000 717140000 30295000 0 0 0 0 0 0 0 2170100 0 0 3449500 4138900 54485 2207 48931 457568;457569;457570;457571;457572;457573;457574;457575;457576;457577;457578;457579;457580 361785;361786;361787;361788;361789;361790;361791;361792;361793;361794;361795;361796 361786 11 VADNLAIQLAAVTEDKYEILQSVDDAAIVIK Unmodified 3327.7814 0.78135319 2207 Q12906 ILF3 Interleukin enhancer-binding factor 3 yes yes 0 0 1 By MS/MS 2.33 0.471 2 1 3 100.69 94.083 3;4 2.1608E-91 119647 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 132.51 126.55 41658000 41658000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54486 2207 48932 457581;457582;457583 361797;361798;361799 361798 3 VADNSFDAK Unmodified 965.44543 0.44542503 2458 Q14978 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 18.18 18.078 2 0.0011072 21484 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.09 86.38 695450000 0 30092000 0 37506000 40966000 42889000 49715000 36131000 36301000 64049000 66321000 95102000 62357000 54777000 79240000 54487 2458 48933 457584;457585;457586;457587;457588;457589;457590;457591;457592;457593;457594;457595;457596 361800;361801;361802;361803;361804;361805;361806;361807;361808;361809;361810;361811;361812;361813 361804 14 VADPGPASTGSNTTASDSLGGSVPK Unmodified 2272.0819 0.081898314 3657 Q92766 RREB1 Ras-responsive element-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 2 1 2 1 1 2 1 1 1 51.159 51.095 2;3 7.0677E-88 57395 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 145.55 126.72 99993000 0 0 0 0 30014000 0 38499000 11433000 0 20046000 0 0 0 0 0 54488 3657 48934 457597;457598;457599;457600;457601;457602;457603;457604;457605;457606;457607;457608 361814;361815;361816;361817;361818;361819;361820;361821;361822;361823 361821 10 VADPTPFHIQAEVTMK Oxidation (M) 1798.8924 0.89237039 1033 P16152 CBR1 Carbonyl reductase [NADPH] 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 1 3 3 74.586 70.161 2;3 8.3187E-11 85722 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 110.8 96.122 1732100000 93923000 1369200000 268970000 0 0 0 0 0 0 0 0 0 0 0 0 54489 1033 48935 457609;457610;457611;457612;457613;457614;457615 361824;361825;361826;361827;361828;361829;361830 361830 1459 5 VADPTPFHIQAEVTMK Unmodified 1782.8975 0.89745577 1033 P16152 CBR1 Carbonyl reductase [NADPH] 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 1 4 1 80.769 76.061 3 1.7804E-16 96487 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 102.38 91.333 436350000 38498000 354240000 43614000 0 0 0 0 0 0 0 0 0 0 0 0 54490 1033 48935 457616;457617;457618;457619;457620;457621 361831;361832;361833;361834;361835;361836;361837 361836 6 VADPVDSSNLDTCGSISQVIEQLPQPNR Unmodified 3038.4615 0.46149239 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 89.791 89.95 3 5.9871E-05 104429 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 30.958 25.298 3225500 0 0 0 0 0 0 0 0 0 2002800 1222800 0 0 0 0 54491 2203 48936 457622;457623 361838 361838 1 VADPVVTFCETVVETSSLK Unmodified 2080.0398 0.039822489 2481 Q15029 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 6 3 2 6 1 96.071 91.646 2;3 4.913E-06 114341 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.666 78.866 265200000 29921000 231120000 4164100 0 0 0 0 0 0 0 0 0 0 0 0 54492 2481 48937 457624;457625;457626;457627;457628;457629;457630;457631;457632 361839;361840;361841;361842;361843;361844;361845 361842 7 VADRLTETMEDGK Unmodified 1463.6926 0.69260795 4161 Q9BUI4 POLR3C DNA-directed RNA polymerase III subunit RPC3 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS 8.22 3.33 2 7 2 1 1 1 1 1 1 1 38.532 37.923 2;3 0.0036414 48047 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 53.136 47.416 53369000 0 0 20921000 0 0 3589400 0 3744400 2490300 4782600 0 0 4761500 4196900 8882900 54493 4161 48938 457633;457634;457635;457636;457637;457638;457639;457640;457641 361846;361847;361848 361848 3 VADSSPFALELLISDDCFVLDNGLCGK Unmodified 2954.4042 0.40416043 1407 P40121 CAPG Macrophage-capping protein yes yes 0 0 0 By MS/MS 2 0 1 1 101.88 93.754 3 0.011795 120590 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 27.131 18.624 24635000 24635000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54494 1407 48939 457642 361849 361849 0 VADVLDVLNEVDEYSGSSEK Unmodified 2167.0168 0.016838441 1396 P38398 BRCA1 Breast cancer type 1 susceptibility protein yes yes 0 0 0 By MS/MS 2.67 0.471 1 2 3 96.453 92.677 2;3 1.8239E-09 114550 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.69 100 18285000 0 18285000 0 0 0 0 0 0 0 0 0 0 0 0 0 54495 1396 48940 457643;457644;457645 361850;361851;361852 361850 3 VADVSQFK Unmodified 892.46543 0.46543219 2801 Q5TKA1 LIN9 Protein lin-9 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.87 32.057 2 0.010495 34947 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 79.469 33.098 175660000 0 0 0 10022000 11533000 15191000 15293000 12472000 11874000 15746000 19923000 19302000 15695000 11809000 16802000 54496 2801 48941 457646;457647;457648;457649;457650;457651;457652;457653;457654;457655;457656;457657 361853;361854;361855;361856;361857;361858;361859;361860;361861;361862;361863 361854 11 VADWTGATYQDK Unmodified 1353.6201 0.62009493 278 O15371 EIF3D Eukaryotic translation initiation factor 3 subunit D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 45.186 43.991 2 1.7524E-28 49568 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 174.98 123.79 976820000 10661000 745740000 0 16407000 13148000 19815000 15532000 17896000 19679000 21792000 0 21585000 20192000 18144000 36223000 54497 278 48942 457658;457659;457660;457661;457662;457663;457664;457665;457666;457667;457668;457669;457670;457671;457672 361864;361865;361866;361867;361868;361869;361870;361871;361872;361873;361874;361875;361876;361877 361872 14 VADYIPQLAK Unmodified 1116.6179 0.61791009 606 O94925 GLS Glutaminase kidney isoform, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 73.464 67.919 2 0.015913 85817 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.897 43.694 35227000 0 35227000 0 0 0 0 0 0 0 0 0 0 0 0 0 54498 606 48943 457673 361878;361879 361879 2 VAEAAIQIFR Unmodified 1116.6291 0.62914348 2647 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.901 74.965 2 8.3215E-07 86338 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 136.8 91.715 153160000 0 0 0 4300400 7927200 15112000 9709500 8132300 9405200 21109000 14362000 16265000 10796000 11724000 24319000 54499 2647 48944 457674;457675;457676;457677;457678;457679;457680;457681;457682;457683;457684;457685 361880;361881;361882;361883;361884;361885;361886;361887;361888;361889;361890;361891 361882 0 VAEAALQIFK Unmodified 1088.623 0.62299547 4633 Q9NTI5 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 77.852 76.544 2 0.001575 87767 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.429 63.262 170180000 25651000 75618000 13841000 1652700 2225900 6312500 4282300 4858000 0 0 6734500 9792300 3402800 5058800 10750000 54500 4633 48945 457686;457687;457688;457689;457690;457691;457692;457693;457694;457695;457696;457697;457698;457699 361892;361893;361894;361895;361896;361897 361892 3 VAEAGNSSIQEGK Unmodified 1288.6259 0.62590859 3105 Q7Z589 EMSY Protein EMSY yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 15.059 15.291 2 0.0014399 15001 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 63.283 44.012 8775500 0 0 0 0 0 1846800 2522000 0 0 0 1667800 0 0 0 2738900 54501 3105 48946 457700;457701;457702;457703 361898;361899;361900 361899 3 VAEAHENIIHGSGATGK Unmodified 1689.8434 0.84344636 2153 Q08257 CRYZ Quinone oxidoreductase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 2.9 2.39 8 1 1 3 3 3 1 26.595 22.818 2;3;4 8.4361E-57 32541 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 210.37 188.98 1321700000 808130000 104570000 398160000 0 0 0 0 0 0 0 0 0 0 0 10806000 54502 2153 48947 457704;457705;457706;457707;457708;457709;457710;457711;457712;457713 361901;361902;361903;361904;361905;361906;361907;361908;361909 361906 6 VAEAVATFLIR Unmodified 1188.6867 0.68665836 5221 Q9Y570 PPME1 Protein phosphatase methylesterase 1 yes yes 0 0 0 By MS/MS 10 0 1 1 82.856 83.047 2 0.0086847 95789 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.276 34.18 6569400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6569400 54503 5221 48948 457714 361910 361910 1 VAEDEAEAAAAAK Unmodified 1244.5885 0.58846046 860 P08195 SLC3A2 4F2 cell-surface antigen heavy chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.22 1 1 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 32.369 32.301 2 6.8269E-08 28846 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 116.23 88.606 939270000 35350000 14359000 0 28053000 49120000 53816000 55507000 47622000 50035000 64834000 113710000 129530000 93462000 97261000 106610000 54504 860 48949 457715;457716;457717;457718;457719;457720;457721;457722;457723;457724;457725;457726;457727;457728;457729 361911;361912;361913;361914;361915;361916;361917;361918;361919;361920;361921;361922;361923;361924;361925 361913 14 VAEDEFDPIPVLITK Unmodified 1684.8924 0.89235362 2651 Q2M2I8 AAK1 AP2-associated protein kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 92.998 91.502 2 0.0002503 113494 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.14 102.92 33661000 0 31694000 0 0 0 0 0 676570 0 0 0 0 0 0 1290300 54505 2651 48950 457730;457731;457732 361926;361927 361926 2 VAEDFVSPEHVK Unmodified 1355.6721 0.67213051 3061;5193 Q9Y4C1;Q7LBC6 KDM3A;KDM3B Lysine-specific demethylase 3A;Lysine-specific demethylase 3B no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.72 2.93 4 21 3 1 1 2 2 2 2 2 2 1 2 2 1 2 44.674 44.224 2;3 0.00010334 50152 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 88.056 57.802 1321100000 0 162960000 2559200 49679000 90855000 93743000 84590000 124730000 77056000 83202000 70290000 110060000 129810000 64967000 176650000 54506 5193;3061 48951 457733;457734;457735;457736;457737;457738;457739;457740;457741;457742;457743;457744;457745;457746;457747;457748;457749;457750;457751;457752;457753;457754;457755;457756;457757 361928;361929;361930;361931;361932;361933;361934;361935;361936;361937;361938;361939;361940;361941;361942;361943;361944;361945;361946;361947;361948;361949;361950;361951;361952;361953;361954;361955;361956;361957;361958;361959;361960;361961;361962;361963 361962 34 VAEEEETSVK Unmodified 1119.5295 0.52954859 5125 Q9Y2X3 NOP58 Nucleolar protein 58 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.192 14.354 2 0.00026432 13115 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 140.35 122.44 125090000 0 0 0 6979900 8762800 8551800 6831400 6949100 7519900 14535000 11963000 16619000 10892000 10376000 15110000 54507 5125 48952 457758;457759;457760;457761;457762;457763;457764;457765;457766;457767;457768;457769 361964;361965;361966;361967;361968;361969;361970;361971;361972;361973;361974 361967 10 VAEEEETSVKK Unmodified 1247.6245 0.62451161 5125 Q9Y2X3 NOP58 Nucleolar protein 58 yes yes 0 0 1 By MS/MS By MS/MS 4 3.03 2 2 1 4 1 10.966 8.3703 2;3 0.0016973 11708 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.255 16.947 38320000 0 31922000 0 0 0 0 0 0 0 0 6398200 0 0 0 0 54508 5125 48953 457770;457771;457772;457773;457774 361975;361976;361977 361976 3 VAEELVAAAR Unmodified 1027.5662 0.56620887 1581 P49593 PPM1F Protein phosphatase 1F yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 44.026 44.479 2 0.04409 48740 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.776 10.558 17938000 0 0 0 0 0 0 0 0 0 5770100 0 0 0 0 12168000 54509 1581 48954 457775;457776 361978 361978 1 VAEEMTFFPK Unmodified 1197.574 0.57399637 200 O14656 TOR1A Torsin-1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.739 74.804 2 0.002198 86151 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 85.676 51.423 101850000 0 0 0 4445300 5378300 5337000 7312400 9542300 5861200 7554600 10454000 13116000 8675400 8075000 16095000 54510 200 48955 457777;457778;457779;457780;457781;457782;457783;457784;457785;457786;457787;457788 361979;361980;361981;361982;361983;361984;361985;361986;361987;361988;361989;361990 361988 12 VAEEMTFFPK Oxidation (M) 1213.5689 0.56891099 200 O14656 TOR1A Torsin-1A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 58.549 58.81 2 0.014437 67080 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 46.39 26.613 50156000 0 0 0 0 0 5752800 6241900 6473100 6164300 0 0 10165000 9371100 0 5987800 54511 200 48955 457789;457790;457791;457792;457793;457794;457795 361991;361992 361991 269 2 VAEFHTELER Unmodified 1229.6041 0.60405094 1544 P48556 PSMD8 26S proteasome non-ATPase regulatory subunit 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 40.163 40.292 3 0.0012536 44635 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 76.143 48.479 411650000 0 0 0 30780000 36665000 34250000 21396000 23419000 0 64315000 67828000 81760000 25748000 25489000 0 54512 1544 48956 457796;457797;457798;457799;457800;457801;457802;457803;457804;457805 361993;361994;361995;361996;361997;361998;361999;362000;362001;362002;362003 361994 11 VAEFHTELERLPAK Unmodified 1638.873 0.87295558 1544 P48556 PSMD8 26S proteasome non-ATPase regulatory subunit 8 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 56.151 56.276 3;4 0.00024752 63632 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 59.607 49.258 592560000 0 0 0 21674000 23116000 66954000 21627000 28021000 18070000 78803000 85381000 96306000 30211000 30946000 91453000 54513 1544 48957 457806;457807;457808;457809;457810;457811;457812;457813;457814;457815;457816;457817;457818;457819;457820;457821;457822;457823;457824;457825;457826;457827;457828;457829 362004;362005;362006;362007;362008;362009;362010;362011;362012;362013;362014;362015;362016;362017;362018;362019 362013 11 VAEIEHAEK Unmodified 1024.5189 0.51892433 1980 P78371 CCT2 T-complex protein 1 subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.79 1 4 1 12 3 2 1 1 1 1 1 1 1 1 1 1 1 1 1 17.263 16.695 2 0.00067901 14108 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 147.29 82.531 3286800000 424850000 1891200000 132380000 34096000 28798000 68175000 67609000 39573000 41610000 85384000 78326000 84525000 81874000 93972000 134410000 54514 1980 48958 457830;457831;457832;457833;457834;457835;457836;457837;457838;457839;457840;457841;457842;457843;457844;457845;457846;457847 362020;362021;362022;362023;362024;362025;362026;362027;362028;362029;362030;362031;362032;362033;362034;362035;362036;362037;362038;362039;362040;362041 362025 20 VAEITELILK Unmodified 1127.6802 0.680176 2126 Q06265 EXOSC9 Exosome complex component RRP45 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 89.294 84.141 2 0.0049244 105880 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.308 87.308 114910000 19486000 75221000 20201000 0 0 0 0 0 0 0 0 0 0 0 0 54515 2126 48959 457848;457849;457850 362042;362043;362044 362042 3 VAEITGVVETAK Unmodified 1215.6711 0.67106787 3618 Q92541 RTF1 RNA polymerase-associated protein RTF1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.776 52.92 2 0.00012105 59728 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 87.298 47.676 341930000 0 0 0 13953000 10032000 38829000 21190000 16703000 19107000 33393000 46721000 51947000 20960000 16699000 52393000 54516 3618 48960 457851;457852;457853;457854;457855;457856;457857;457858;457859;457860;457861;457862 362045;362046;362047;362048;362049;362050;362051;362052;362053;362054;362055;362056 362053 12 VAELENSEFR Unmodified 1192.5724 0.57241646 1084 P19256 CD58 Lymphocyte function-associated antigen 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 45.446 45.446 2 0.002198 50629 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 85.676 56.527 15560000 0 0 0 4464300 2478900 0 0 0 0 0 0 4909500 3707400 0 0 54517 1084 48961 457863;457864;457865;457866;457867;457868;457869 362057;362058;362059;362060;362061;362062 362061 6 VAELFEK Unmodified 834.44872 0.4487195 5254 Q9Y5X3 SNX5 Sorting nexin-5 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.36 2.01 1 10 1 1 1 1 1 1 1 1 1 1 1 43.31 43.153 2 0.037306 48426 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 69.998 12.535 188000000 0 16847000 0 0 0 21206000 12859000 11764000 8777100 20027000 22872000 17515000 18437000 14857000 22835000 54518 5254 48962 457870;457871;457872;457873;457874;457875;457876;457877;457878;457879;457880 362063;362064;362065 362063 3 VAELILHGQEEEK Unmodified 1493.7726 0.77257283 3239 Q8IWE2 FAM114A1 Protein NOXP20 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.45 3.11 3 1 16 1 1 2 1 1 2 1 1 1 1 1 2 2 1 2 46.433 45.993 2;3 1.375E-07 50253 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 97.813 71.371 284420000 187060 17216000 68401000 8684000 4276100 25590000 12900000 11350000 10624000 17452000 13427000 26902000 24079000 11080000 32258000 54519 3239 48963 457881;457882;457883;457884;457885;457886;457887;457888;457889;457890;457891;457892;457893;457894;457895;457896;457897;457898;457899;457900 362066;362067;362068;362069;362070;362071;362072;362073;362074;362075;362076;362077;362078;362079;362080;362081;362082;362083 362070 16 VAELILHGQEEEKPAQDQAK Unmodified 2232.1386 0.13862533 3239 Q8IWE2 FAM114A1 Protein NOXP20 yes yes 0 0 1 By MS/MS By matching By MS/MS 6.8 3.92 2 3 2 1 2 45.679 44.561 3;4 1.7527E-07 48239 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.539 78.06 99680000 0 0 39395000 0 0 0 0 0 0 0 0 19573000 0 0 40712000 54520 3239 48964 457901;457902;457903;457904;457905 362084;362085;362086;362087;362088 362084 4 VAELLGESDGRR Unmodified 1300.6735 0.67352749 4629 Q9NSK0 KLC4 Kinesin light chain 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 34.226 34.565 3 8.1703E-06 37511 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 75.819 50.346 128650000 0 0 0 0 0 15503000 0 11672000 8069200 17229000 34476000 19569000 0 0 22129000 54521 4629 48965 457906;457907;457908;457909;457910;457911;457912 362089;362090;362091;362092;362093;362094;362095 362093 7 VAELSSDDFHLDR Unmodified 1502.7001 0.70013617 3682 Q92896 GLG1 Golgi apparatus protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.395 62.491 3 0.009845 71815 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 35.118 22.972 62049000 0 0 0 3080400 2268300 4726300 3041400 5124200 2027100 3764600 5781600 9666800 4319300 4508200 13741000 54522 3682 48966 457913;457914;457915;457916;457917;457918;457919;457920;457921;457922;457923;457924 362096;362097;362098;362099;362100;362101;362102;362103 362101 7 VAEPELMGTPDGTCYPPPPVPR Unmodified 2379.1239 0.12390324 1224 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 0 0 0 By MS/MS 2 0 2 2 83.398 78.678 2;3 3.0721E-61 97916 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.77 126.48 66708000 0 66708000 0 0 0 0 0 0 0 0 0 0 0 0 0 54523 1224 48967 457925;457926 362104;362105 362105 2 VAEQAANDLR Unmodified 1085.5465 0.54653606 3090 Q7Z406 MYH14 Myosin-14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 22.869 22.865 2 0.00092213 24168 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 113.62 66.048 22851000 0 0 0 15026000 0 0 1717600 6107500 0 0 0 0 0 0 0 54524 3090 48968 457927;457928;457929 362106;362107;362108 362108 3 VAEQERTAQQLRAEK Unmodified 1755.9228 0.92275932 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 2 By MS/MS 2 0 1 1 26.064 20.841 4 0.000253 29504 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.044 50.029 39761000 39761000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54525 2459 48969 457930 362109;362110;362111 362109 3 VAEQVGIDR Unmodified 985.51926 0.51925868 2300 Q13492 PICALM Phosphatidylinositol-binding clathrin assembly protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.759 27.957 2 0.0036563 29956 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 89.355 45.547 96360000 0 0 0 5867200 5797200 12005000 9452900 5763100 4627000 6363400 8487900 6645800 7634000 7994000 15723000 54526 2300 48970 457931;457932;457933;457934;457935;457936;457937;457938;457939;457940;457941;457942 362112;362113;362114;362115;362116;362117;362118;362119;362120;362121;362122;362123;362124 362116 13 VAEQVLNAVNK Unmodified 1183.6561 0.65608651 4496 Q9HB40 SCPEP1 Retinoid-inducible serine carboxypeptidase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 48.938 48.144 2 2.0416E-21 55324 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 199.46 140.86 130670000 0 48101000 0 23720000 3800100 0 6763100 6552800 3158100 8998100 6541800 9974900 7352400 5712200 0 54527 4496 48971 457943;457944;457945;457946;457947;457948;457949;457950;457951;457952;457953;457954;457955 362125;362126;362127;362128;362129;362130;362131;362132;362133;362134;362135;362136 362135 11 VAEQVLQQK Unmodified 1041.5819 0.58185893 1991 P80217 IFI35 Interferon-induced 35 kDa protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 28.465 26.228 2 3.2657E-06 33435 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 175.38 105.94 221600000 10478000 196190000 0 0 0 0 0 0 0 0 6253000 8678200 0 0 0 54528 1991 48972 457956;457957;457958;457959;457960;457961;457962 362137;362138;362139;362140;362141;362142;362143 362138 7 VAERPQHMLMR Oxidation (M) 1382.6911 0.69110858 1171 P23921 RRM1 Ribonucleoside-diphosphate reductase large subunit yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 21.811 22.057 3 0.0051268 23004 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 45.077 28.135 276860000 0 0 0 0 7506600 36247000 27630000 19188000 18688000 0 26228000 39538000 24432000 24415000 52988000 54529 1171 48973 457963;457964;457965;457966;457967;457968;457969;457970;457971;457972 362144;362145;362146 362144 1697;1698 1 VAERPQHMLMR Unmodified 1366.6962 0.69619396 1171 P23921 RRM1 Ribonucleoside-diphosphate reductase large subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 28.718 28.986 3 0.0001701 31336 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 88.596 76.041 220340000 0 0 0 0 4010600 37294000 0 0 0 29574000 42509000 40621000 0 0 66336000 54530 1171 48973 457973;457974;457975;457976;457977;457978 362147;362148;362149;362150;362151;362152 362147 5 VAERPQHMLMR 2 Oxidation (M) 1398.686 0.68602321 1171 P23921 RRM1 Ribonucleoside-diphosphate reductase large subunit yes yes 0 2 1 By MS/MS 10 0 1 1 8.2902 8.6491 3 0.03169 6758 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 40.589 17.672 24285000 0 0 0 0 0 0 0 0 0 0 24285000 0 0 0 0 54531 1171 48973 457979 362153 362153 1697;1698 0 VAETANEEEVK Unmodified 1217.5776 0.57756142 1839 P61221 ABCE1 ATP-binding cassette sub-family E member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 16.179 15.951 2 1.3439E-05 14767 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 162.88 116.49 67938000 8833400 0 0 2129500 1471900 3826400 2750900 3161800 2784300 3998200 7906900 9294600 0 5758400 16022000 54532 1839 48974 457980;457981;457982;457983;457984;457985;457986;457987;457988;457989;457990;457991;457992 362154;362155;362156;362157;362158;362159;362160;362161;362162;362163;362164;362165 362157 12 VAETANEEEVKK Unmodified 1345.6725 0.67252444 1839 P61221 ABCE1 ATP-binding cassette sub-family E member 1 yes yes 0 0 1 By MS/MS By MS/MS 4 3.03 2 2 1 4 1 13.168 10.537 2;3 0.00043387 14300 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.667 70.073 76444000 0 74680000 0 0 0 0 0 0 0 0 1763500 0 0 0 0 54533 1839 48975 457993;457994;457995;457996;457997 362166;362167;362168;362169 362166 4 VAETAVQLFISGDK Unmodified 1476.7824 0.78240924 1902 P62495 ETF1 Eukaryotic peptide chain release factor subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.08 3.93 10 2 12 4 5 3 1 1 1 1 1 1 1 1 1 1 1 1 85.582 83.853 2;3 1.7598E-40 96924 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 169.52 121.24 1587200000 114680000 1245300000 62618000 0 4976900 14674000 9477200 9240600 11639000 23503000 24892000 14920000 5948600 14447000 30843000 54534 1902 48976 457998;457999;458000;458001;458002;458003;458004;458005;458006;458007;458008;458009;458010;458011;458012;458013;458014;458015;458016;458017;458018;458019;458020;458021 362170;362171;362172;362173;362174;362175;362176;362177;362178;362179;362180;362181;362182;362183;362184;362185;362186;362187;362188;362189;362190;362191;362192 362185 19 VAETGQVDGELIR Unmodified 1385.7151 0.71505795 5191 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 2 2 2 1 1 1 1 1 1 1 69.587 69.511 2 4.6418E-08 58635 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 103.91 65.606 265370000 0 0 0 28774000 23727000 27548000 0 19520000 0 37370000 23829000 30307000 23864000 0 50425000 54535 5191 48977 458022;458023;458024;458025;458026;458027;458028;458029;458030;458031;458032;458033;458034 362193;362194;362195;362196;362197 362197 5 VAEVALDK Unmodified 843.47018 0.47018322 3831 Q96F10 SAT2 Diamine acetyltransferase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 2 1 1 1 1 1 1 29.127 29.237 2 0.0047077 31631 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 113.41 14.994 1779700000 0 0 0 149740000 247800000 227460000 3621600 0 0 366660000 391630000 390970000 0 0 1797600 54536 3831 48978 458035;458036;458037;458038;458039;458040;458041;458042;458043 362198;362199;362200;362201;362202;362203;362204;362205;362206;362207;362208 362205 11 VAEVAPEERENVAVAK Unmodified 1709.8948 0.89481323 2890 Q6IQ49 SDE2 Protein SDE2 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.86 38.04 3 1.7668E-23 41704 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 91.657 80.377 253800000 0 0 0 14449000 16969000 18207000 16768000 25801000 13966000 21160000 26058000 28832000 19421000 17435000 34738000 54537 2890 48979 458044;458045;458046;458047;458048;458049;458050;458051;458052;458053;458054;458055 362209;362210;362211;362212;362213;362214;362215;362216;362217;362218;362219;362220 362218 12 VAEVLEGK Unmodified 843.47018 0.47018322 4144 Q9BTE6 AARSD1 Alanyl-tRNA editing protein Aarsd1 yes yes 0 0 0 By MS/MS 10 0 1 1 26.27 26.951 2 0.047929 27816 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.657 1.9577 25408000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25408000 54538 4144 48980 458056 362221 362221 1 VAEVLFDAADANAIEEVNLAYENVK Unmodified 2706.3388 0.33884128 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.5 0.5 2 2 2 1 1 97.363 93.006 3 3.5586E-47 115932 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 119.33 108.64 167900000 112100000 25897000 29911000 0 0 0 0 0 0 0 0 0 0 0 0 54539 2392 48981 458057;458058;458059;458060 362222;362223;362224;362225 362224 4 VAEVLNDPENMEK Oxidation (M) 1502.6923 0.6922736 2143 Q07866 KLC1 Kinesin light chain 1 yes yes 0 1 0 By MS/MS 10 0 1 1 38.158 38.897 2 0.00044482 42063 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.499 57.493 10385000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10385000 54540 2143 48982 458061 362226 362226 3450 1 VAEVLNDPENMEK Unmodified 1486.6974 0.69735898 2143 Q07866 KLC1 Kinesin light chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 50.899 51.359 2 0.00089473 57224 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 68.536 54.944 21258000 0 0 0 0 0 0 0 0 0 0 0 13157000 0 8101500 0 54541 2143 48982 458062;458063;458064 362227;362228;362229 362228 3 VAEVQQVLRPAEK Unmodified 1465.8253 0.8252771 2342 Q13751 LAMB3 Laminin subunit beta-3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.814 46.98 3 0.00051227 51581 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.889 61.523 72861000 0 0 0 6382900 4239400 7094600 4749400 3860700 4986000 5740300 7202600 8600100 5852800 5276200 8875500 54542 2342 48983 458065;458066;458067;458068;458069;458070;458071;458072;458073;458074;458075;458076 362230;362231;362232;362233;362234;362235;362236;362237;362238;362239 362233 10 VAEWREEGK Unmodified 1102.5407 0.5407224 5077 Q9Y230 RUVBL2 RuvB-like 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18.255 17.638 2 1.3241E-05 23763 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 166.09 125.09 248820000 14852000 32499000 37540000 8746900 6355600 9919300 8323400 8765000 6418700 15330000 14987000 25287000 19134000 12069000 28596000 54543 5077 48984 458077;458078;458079;458080;458081;458082;458083;458084;458085;458086;458087;458088;458089;458090;458091 362240;362241;362242;362243;362244 362241 2 VAFCGAPEEGR Unmodified 1191.5343 0.53425682 3293 Q8IZ83 ALDH16A1 Aldehyde dehydrogenase family 16 member A1 yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 37.618 38.12 2 0.011375 41175 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.602 39.739 9387000 0 0 0 0 0 1434800 0 0 0 0 0 2916200 0 0 5036000 54544 3293 48985 458092;458093;458094 362245 362245 1 VAFDELVR Unmodified 947.50763 0.50763136 411 O60547 GMDS GDP-mannose 4,6 dehydratase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.222 68.304 2 0.017693 78616 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 65.252 39.143 215210000 0 0 0 9782100 8041400 18949000 16389000 17318000 12761000 24552000 22523000 16937000 15048000 17585000 35327000 54545 411 48986 458095;458096;458097;458098;458099;458100;458101;458102;458103;458104;458105;458106 362246;362247;362248;362249;362250;362251 362249 5 VAFERGEEPGK Unmodified 1217.6041 0.60405094 2152 Q08211 DHX9 ATP-dependent RNA helicase A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 2 1 1 1 1 1 1 22.978 23.179 3 0.014512 24775 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 42.243 25.989 388110000 0 0 0 33908000 27532000 34217000 21537000 22609000 18723000 33353000 31222000 47018000 43855000 36078000 38056000 54546 2152 48987 458107;458108;458109;458110;458111;458112;458113;458114;458115;458116;458117;458118;458119 362252;362253;362254;362255;362256 362255 2 VAFGSLAANGPTTLVDK Unmodified 1659.8832 0.88318591 4978 Q9UKX7 NUP50 Nuclear pore complex protein Nup50 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 2 1 2 1 1 1 1 1 1 1 1 1 1 1 1 80.307 78.903 2;3 1.9145E-126 92291 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 198.14 171.35 502870000 97561000 18896000 12686000 14154000 20461000 25643000 22347000 25418000 20641000 44510000 34770000 50969000 30670000 30277000 53867000 54547 4978 48988 458120;458121;458122;458123;458124;458125;458126;458127;458128;458129;458130;458131;458132;458133;458134;458135;458136 362257;362258;362259;362260;362261;362262;362263;362264;362265;362266;362267;362268;362269;362270;362271;362272;362273;362274;362275 362272 18 VAFIESLK Unmodified 905.52222 0.52221879 277 O15360 FANCA Fanconi anemia group A protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 67.553 67.778 2 0.020846 77544 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 62.464 30.529 37996000 0 0 0 0 0 5119700 2880500 0 0 5670300 5755200 5556600 3615200 3973400 5425300 54548 277 48989 458137;458138;458139;458140;458141;458142;458143;458144 362276;362277;362278;362279 362279 4 VAFITGGGTGLGK Unmodified 1176.6503 0.65027285 2628 Q16698 DECR1 2,4-dienoyl-CoA reductase, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 69.856 63.987 2 0.04378 81283 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 51.454 2.8928 161530000 0 161530000 0 0 0 0 0 0 0 0 0 0 0 0 0 54549 2628 48990 458145 362280 362280 1 VAFTLLEK Unmodified 919.53787 0.53786886 288 O15498 YKT6 Synaptobrevin homolog YKT6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 73.659 73.841 2 0.033237 84964 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 98.997 41.533 329290000 0 0 0 0 0 51145000 31402000 24605000 0 45949000 43962000 45815000 0 27784000 58633000 54550 288 48991 458146;458147;458148;458149;458150;458151;458152;458153;458154 362281;362282;362283;362284 362284 1 VAFVNFR Unmodified 851.46537 0.46537261 3997 Q96T37 RBM15 Putative RNA-binding protein 15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.589 64.678 2 0.023434 73625 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 85.306 70.893 117730000 0 0 0 5505300 5975400 7638200 7497000 8849700 8074600 11167000 9888200 19579000 8893400 7583200 17074000 54551 3997 48992 458155;458156;458157;458158;458159;458160;458161;458162;458163;458164;458165;458166 362285;362286;362287;362288;362289;362290;362291;362292 362289 8 VAGALAEAGVGLEEIAK Unmodified 1596.8723 0.87228688 2672 Q3LXA3 DAK Bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase (cyclizing);ATP-dependent dihydroxyacetone kinase;FAD-AMP lyase (cyclizing) yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3.87 3.1 8 4 3 3 7 2 1 1 1 86.866 83.496 2;3 2.4666E-46 103996 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 165.58 141.6 2083000000 27448000 1933000000 102000000 0 0 3776000 0 0 0 0 0 0 0 2632700 14177000 54552 2672 48993 458167;458168;458169;458170;458171;458172;458173;458174;458175;458176;458177;458178;458179;458180;458181 362293;362294;362295;362296;362297;362298;362299;362300;362301;362302;362303;362304;362305;362306;362307 362295 11 VAGALVQNTEK Unmodified 1128.6139 0.61388734 5051 Q9UPN7 PPP6R1 Serine/threonine-protein phosphatase 6 regulatory subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 25.957 26.157 2 2.1517E-05 27755 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 123.35 77.383 130420000 0 0 0 4974000 7204900 11229000 8974600 5433600 7119100 11562000 12044000 17133000 12364000 14006000 18378000 54553 5051 48994 458182;458183;458184;458185;458186;458187;458188;458189;458190;458191;458192;458193 362308;362309;362310;362311;362312;362313;362314;362315;362316;362317;362318;362319;362320 362309 13 VAGASRIIGVDINK Unmodified 1411.8147 0.81471242 955 P11766 ADH5 Alcohol dehydrogenase class-3 yes yes 0 0 1 By MS/MS 2 0 1 1 66.893 58.598 3 0.0056533 78471 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.276 9.6618 228280000 228280000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54554 955 48995 458194 362321 362321 1 VAGGAAPSKPASAK Unmodified 1210.667 0.66698555 2458 Q14978 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.81 2.84 4 23 1 2 1 2 2 1 2 2 2 2 2 2 2 2 2 8.2882 7.9339 2;3 0.00014066 5593 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 65.472 52.517 449860000 20531000 22317000 1035900 25316000 19723000 3316300 30292000 22475000 6403400 27976000 112700000 68056000 34729000 30412000 24578000 54555 2458 48996 458195;458196;458197;458198;458199;458200;458201;458202;458203;458204;458205;458206;458207;458208;458209;458210;458211;458212;458213;458214;458215;458216;458217;458218;458219;458220;458221 362322;362323;362324;362325;362326;362327;362328;362329;362330;362331;362332 362326 8 VAGHPLAQNER Unmodified 1190.6156 0.61561868 404 O60493 SNX3 Sorting nexin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 4 22 2 1 1 2 2 2 2 2 2 1 1 2 2 2 2 11.408 10.984 2;3 0.00037912 8975 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 118.18 102.52 693810000 114080000 29086000 10346000 43864000 21479000 57212000 42836000 24399000 21027000 10607000 38529000 75543000 57425000 51023000 96360000 54556 404 48997 458222;458223;458224;458225;458226;458227;458228;458229;458230;458231;458232;458233;458234;458235;458236;458237;458238;458239;458240;458241;458242;458243;458244;458245;458246;458247 362333;362334;362335;362336;362337;362338;362339;362340;362341;362342;362343;362344;362345;362346;362347;362348 362337 11 VAGHPNIVINNAAGNFISPTER Unmodified 2290.1818 0.18182755 2628 Q16698 DECR1 2,4-dienoyl-CoA reductase, mitochondrial yes yes 0 0 0 By matching By MS/MS By matching 10 0 3 1 1 1 75.293 75.299 3 3.9508E-05 86958 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 47.75 43.986 15341000 0 0 0 1354800 0 0 0 0 0 0 0 6248100 0 0 7738500 54557 2628 48998 458248;458249;458250 362349 362349 1 VAGIFPR Unmodified 758.44391 0.44390889 711 O96005 CLPTM1 Cleft lip and palate transmembrane protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 50.102 50.055 2 0.023331 56546 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 90.939 30.535 34505000 0 0 0 3986600 3775800 0 3880800 5265500 0 0 10842000 0 0 6753400 0 54558 711 48999 458251;458252;458253;458254;458255;458256;458257 362350;362351;362352;362353;362354;362355 362350 6 VAGILTVK Unmodified 799.51674 0.51673948 4061 Q99798 ACO2 Aconitate hydratase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 57.15 50.845 2 0.01816 62557 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 89.142 27.145 212480000 138410000 74063000 0 0 0 0 0 0 0 0 0 0 0 0 0 54559 4061 49000 458258;458259;458260 362356;362357 362356 2 VAGLCSNIR Unmodified 988.5124 0.51239916 1234 P28340 POLD1 DNA polymerase delta catalytic subunit yes yes 0 0 0 By matching By MS/MS By matching 10 0 3 1 1 1 36.7 37.162 2 0.040615 41193 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 44.349 5.5575 14257000 0 0 0 0 0 0 0 0 0 0 0 6825500 3911400 3520500 0 54560 1234 49001 458261;458262;458263 362358 362358 1 VAGLLTQK Unmodified 828.5069 0.50690308 954 P11717 IGF2R Cation-independent mannose-6-phosphate receptor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35.143 34.465 2 0.024584 47842 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.119 35.237 95984000 14264000 8607900 0 3190100 4388200 7749100 5104300 6110800 3958600 6307800 7386600 9715500 6924000 4983500 7294500 54561 954 49002 458264;458265;458266;458267;458268;458269;458270;458271;458272;458273;458274;458275;458276;458277 362359;362360;362361 362360 3 VAGLQPVLLQDR Unmodified 1307.7561 0.75613491 2798 Q5TGY1 TMCO4 Transmembrane and coiled-coil domain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.223 75.282 2 0.0029345 86747 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 61.765 48.173 74632000 0 0 0 3199600 5067600 4885000 6686900 8371400 3121500 7053700 6010400 7760200 6541100 6059500 9875400 54562 2798 49003 458278;458279;458280;458281;458282;458283;458284;458285;458286;458287;458288;458289 362362;362363;362364;362365;362366;362367;362368;362369;362370;362371;362372;362373 362368 12 VAGLQPVLLQDRR Unmodified 1463.8572 0.85724593 2798 Q5TGY1 TMCO4 Transmembrane and coiled-coil domain-containing protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 65.689 65.845 3 0.002452 75886 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 42.095 26.155 41048000 0 0 0 0 1910500 2777700 2604900 4716000 2427800 4075100 3627000 5860800 4071500 3501300 5475900 54563 2798 49004 458290;458291;458292;458293;458294;458295;458296;458297;458298;458299;458300 362374;362375;362376;362377;362378;362379;362380;362381;362382 362381 9 VAGMDVELTVEER Oxidation (M) 1462.6974 0.69735898 1882 P62258 YWHAE 14-3-3 protein epsilon yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.8 4 1 8 2 2 1 1 1 1 1 1 1 1 1 56.398 54.552 2 2.7755E-21 66384 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 143.61 126.94 200340000 6301000 115440000 3242600 0 0 0 0 0 2601100 4994200 13410000 16298000 3032500 9607900 25412000 54564 1882 49005 458301;458302;458303;458304;458305;458306;458307;458308;458309;458310;458311;458312;458313 362383;362384;362385;362386;362387;362388;362389;362390;362391;362392;362393;362394;362395;362396;362397;362398 362390 3056 16 VAGMDVELTVEER Unmodified 1446.7024 0.70244436 1882 P62258 YWHAE 14-3-3 protein epsilon yes yes 0 0 0 By MS/MS 2 0 1 1 78.178 70.047 2 0.066813 92190 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.172 41.929 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54565 1882 49005 458314 362399 362399 1 VAGMDVELTVEERNLLSVAYK Oxidation (M) 2351.2043 0.20426206 1882 P62258 YWHAE 14-3-3 protein epsilon yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2.25 0.661 1 4 3 5 2 1 93.863 90.283 3 1.4142E-59 103763 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 139.11 127.66 378190000 318190000 53827000 6171200 0 0 0 0 0 0 0 0 0 0 0 0 54566 1882 49006 458315;458316;458317;458318;458319;458320;458321;458322 362400;362401;362402;362403;362404;362405;362406;362407;362408;362409 362404 3056 10 VAGMDVELTVEERNLLSVAYK Unmodified 2335.2093 0.20934743 1882 P62258 YWHAE 14-3-3 protein epsilon yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.47 0.612 2 13 17 27 4 1 100.97 96.571 3 1.2835E-92 94777 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 165.74 161.39 879810000 788630000 81170000 10013000 0 0 0 0 0 0 0 0 0 0 0 0 54567 1882 49006 458323;458324;458325;458326;458327;458328;458329;458330;458331;458332;458333;458334;458335;458336;458337;458338;458339;458340;458341;458342;458343;458344;458345;458346;458347;458348;458349;458350;458351;458352;458353;458354 362410;362411;362412;362413;362414;362415;362416;362417;362418;362419;362420;362421;362422;362423;362424;362425;362426;362427;362428;362429;362430;362431;362432;362433;362434;362435;362436;362437;362438;362439;362440;362441;362442;362443;362444;362445;362446;362447;362448;362449;362450;362451;362452;362453;362454;362455;362456;362457;362458;362459;362460;362461 362414 49 VAGMLAVGK Oxidation (M) 860.47897 0.47897377 2150 Q08188 TGM3 Protein-glutamine gamma-glutamyltransferase E;Protein-glutamine gamma-glutamyltransferase E 50 kDa catalytic chain;Protein-glutamine gamma-glutamyltransferase E 27 kDa non-catalytic chain yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 26.049 26.123 2 0.0034266 27625 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 80.462 53.666 90822000 0 0 0 31547000 6563400 6073200 6913000 18332000 3216300 10364000 0 0 0 0 7813600 54568 2150 49007 458355;458356;458357;458358;458359;458360;458361;458362;458363 362462;362463;362464;362465;362466;362467;362468 362467 3458 7 VAGMLAVGK Unmodified 844.48406 0.48405915 2150 Q08188 TGM3 Protein-glutamine gamma-glutamyltransferase E;Protein-glutamine gamma-glutamyltransferase E 50 kDa catalytic chain;Protein-glutamine gamma-glutamyltransferase E 27 kDa non-catalytic chain yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 43.351 43.431 2 0.0069815 47910 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.637 48.818 101450000 0 0 0 29420000 5595900 0 5579800 18293000 0 11248000 10139000 21174000 0 0 0 54569 2150 49007 458364;458365;458366;458367;458368;458369;458370 362469;362470;362471;362472 362471 3 VAGMLQR Oxidation (M) 789.41671 0.41670786 419 O60645 EXOC3 Exocyst complex component 3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 15.524 15.715 2 0.047552 15839 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 50.12 9.199 52288000 0 0 0 4463300 0 5878100 0 3135900 2527700 7952600 10557000 0 5369500 0 12405000 54570 419 49008 458371;458372;458373;458374;458375;458376;458377;458378 362473 362473 1 VAGMLQRPDQLDK Unmodified 1469.766 0.76604767 419 O60645 EXOC3 Exocyst complex component 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.531 46.697 3 0.0003843 52612 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 77.527 61.584 97554000 0 0 0 5157600 4852500 7494400 5968300 7082400 5853700 10431000 11183000 9059400 10622000 7695500 12155000 54571 419 49009 458379;458380;458381;458382;458383;458384;458385;458386;458387;458388;458389;458390 362474;362475;362476;362477;362478;362479;362480;362481;362482;362483;362484 362474 10 VAGNFHFAPGK Unmodified 1143.5825 0.58252764 5089 Q9Y282 ERGIC3 Endoplasmic reticulum-Golgi intermediate compartment protein 3 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 8.93 2.72 2 13 1 1 1 1 1 1 1 1 1 1 3 1 1 45.163 44.419 3 0.0029709 48132 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.894 29.454 246880000 29341000 8851700 0 14280000 18360000 11647000 0 22805000 13786000 20376000 12063000 18794000 42536000 12277000 21768000 54572 5089 49010 458391;458392;458393;458394;458395;458396;458397;458398;458399;458400;458401;458402;458403;458404;458405 362485;362486;362487;362488;362489;362490 362485 4 VAGPNGYAILLAVPGSSDSR Unmodified 1943.0112 0.011239973 3997 Q96T37 RBM15 Putative RNA-binding protein 15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 87.183 87.291 2 0.0003016 101278 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 66.285 44.984 26878000 0 0 0 0 1245300 1808800 1367800 2019900 1650400 3077800 2316100 4052000 1602000 2088300 5650100 54573 3997 49011 458406;458407;458408;458409;458410;458411;458412;458413;458414;458415;458416 362491;362492;362493;362494;362495;362496;362497;362498;362499;362500;362501 362492 11 VAGQDGSVVQFK Unmodified 1233.6354 0.63535107 1862;1775 P61956;Q6EEV6;P55854 SUMO2;SUMO4;SUMO3 Small ubiquitin-related modifier 2;Small ubiquitin-related modifier 4;Small ubiquitin-related modifier 3 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.45 3.94 1 6 2 11 3 4 2 1 1 1 1 1 1 1 1 1 1 1 50.065 48.47 2;3 3.3855E-22 59990 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 194.06 144.96 8304200000 213720000 6562800000 84417000 31768000 28446000 36211000 30066000 34664000 0 39040000 224500000 208220000 74786000 154400000 581140000 54574 1862;1775 49012 458417;458418;458419;458420;458421;458422;458423;458424;458425;458426;458427;458428;458429;458430;458431;458432;458433;458434;458435;458436 362502;362503;362504;362505;362506;362507;362508;362509;362510;362511;362512;362513;362514;362515;362516;362517;362518;362519;362520;362521 362513 10 VAGTGEGGLEEMVEELNSGK Oxidation (M) 2020.9259 0.92591494 4940 Q9UJU6 DBNL Drebrin-like protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 72.255 72.315 2 1.4042E-47 83209 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 116.84 105.73 80049000 0 0 0 5738800 4656900 7518100 3954100 0 4803900 7698300 11127000 9530000 4564700 5800700 14656000 54575 4940 49013 458437;458438;458439;458440;458441;458442;458443;458444;458445;458446;458447 362522;362523;362524;362525;362526;362527;362528;362529;362530;362531;362532 362523 6283 11 VAGVVAPTLPR Unmodified 1078.6499 0.64987892 1496 P46063 RECQL ATP-dependent DNA helicase Q1 yes yes 0 0 0 By MS/MS 10 0 1 1 62.293 62.866 2 0.046412 71133 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.418 22.281 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54576 1496 49014 458448 362533 362533 1 VAGVVAPTLPREDLEK Unmodified 1692.941 0.94103514 1496 P46063 RECQL ATP-dependent DNA helicase Q1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 66.829 67.071 3 1.7074E-19 76895 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 81.632 78.972 190390000 0 0 0 0 0 24127000 0 0 0 21796000 26021000 26311000 13942000 20486000 57705000 54577 1496 49015 458449;458450;458451;458452;458453;458454;458455 362534;362535;362536;362537;362538;362539;362540;362541 362535 8 VAGYAALLEQYQK Unmodified 1452.7613 0.76127986 1750 P54920 NAPA Alpha-soluble NSF attachment protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 80.756 79.423 2 3.701E-05 91833 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 108.7 73.155 138650000 46984000 0 4561500 7824400 8028800 0 0 10164000 7726100 0 0 0 13046000 0 40316000 54578 1750 49016 458456;458457;458458;458459;458460;458461;458462;458463 362542;362543;362544;362545;362546;362547;362548;362549;362550 362544 9 VAHALAEGLGVIACIGEK Unmodified 1806.9662 0.96620404 1808 P60174 TPI1 Triosephosphate isomerase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.22 0.416 7 2 3 5 1 92.108 87.552 2;3 1.2512E-11 108524 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.6 95.827 844200000 265900000 574200000 4112800 0 0 0 0 0 0 0 0 0 0 0 0 54579 1808 49017 458464;458465;458466;458467;458468;458469;458470;458471;458472 362551;362552;362553;362554;362555;362556;362557;362558;362559;362560;362561;362562;362563;362564 362551 13 VAHEINHGIGQAGK Unmodified 1429.7426 0.74261011 2981 Q6UWP8 SBSN Suprabasin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.195 15.365 3 7.901E-17 14615 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 145.71 134.65 160150000 0 0 0 26914000 6117600 4518900 9077000 14539000 3761400 11234000 16952000 28162000 17570000 9346900 11958000 54580 2981 49018 458473;458474;458475;458476;458477;458478;458479;458480;458481;458482;458483;458484 362565;362566;362567;362568;362569;362570;362571;362572;362573 362572 8 VAHFLEK Unmodified 842.46504 0.46503826 1358 P35606 COPB2 Coatomer subunit beta' yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 23.097 23.642 2 0.023899 24910 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 94.262 46.088 72945000 0 0 0 0 0 0 0 0 0 0 14573000 19940000 16762000 0 21670000 54581 1358 49019 458485;458486;458487;458488 362574;362575 362575 2 VAHGALSDGAIDAVETQK Unmodified 1780.8955 0.89554151 395 O60318 MCM3AP Germinal-center associated nuclear protein yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 57.128 52.776 3 0.010944 65108 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 32.858 14.026 8542200 0 2578300 5963900 0 0 0 0 0 0 0 0 0 0 0 0 54582 395 49020 458489;458490 362576;362577;362578 362576 3 VAHSDKPGSTSTASFR Unmodified 1646.8012 0.8012472 4794 Q9P0L0 VAPA Vesicle-associated membrane protein-associated protein A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.081 16.254 3 5.4838E-15 16449 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 100.41 85.172 190110000 0 0 0 11386000 10751000 8337200 13820000 10808000 10726000 11017000 24026000 32017000 20073000 19520000 17630000 54583 4794 49021 458491;458492;458493;458494;458495;458496;458497;458498;458499;458500;458501;458502 362579;362580;362581;362582;362583;362584;362585;362586;362587;362588;362589 362581 10 VAHSFNCTPIEGMLSHQLK Unmodified 2168.0507 0.050678722 5067 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 yes yes 0 0 0 By MS/MS By MS/MS 6.5 3.5 1 1 1 1 78.868 77.361 4 0.0038076 87830 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.274 28.921 32196000 0 8847600 0 0 0 0 0 0 0 0 0 0 0 0 23348000 54584 5067 49022 458503;458504 362590;362591 362590 2 VAHSFNCTPIEGMLSHQLK Oxidation (M) 2184.0456 0.045593344 5067 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 yes yes 0 1 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 63.278 62.059 4 0.0018127 69390 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.082 42.976 108260000 45608000 0 0 1124600 0 0 0 0 0 0 5773100 6684400 0 10361000 38711000 54585 5067 49022 458505;458506;458507;458508;458509;458510 362592;362593 362592 6438 0 VAHTCLHPQESLPDTR Unmodified 1859.8948 0.89483001 412 O60563 CCNT1 Cyclin-T1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 16 1 1 2 1 1 2 2 1 1 2 2 37.574 37.722 3;4 0.0031078 41656 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 42.647 32.59 87350000 0 0 0 4288700 2864100 10034000 3428000 2543400 6952700 11230000 6693900 8700800 20997000 9616800 0 54586 412 49023 458511;458512;458513;458514;458515;458516;458517;458518;458519;458520;458521;458522;458523;458524;458525;458526 362594;362595;362596 362596 3 VAIAENLLDVIK Unmodified 1296.7653 0.76530261 3601 Q8WYP5 AHCTF1 Protein ELYS yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 95.732 91.702 2 0.0055687 113997 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.658 63.794 27079000 0 27079000 0 0 0 0 0 0 0 0 0 0 0 0 0 54587 3601 49024 458527;458528 362597 362597 1 VAIDVGYR Unmodified 891.48142 0.48141661 1013 P15121 AKR1B1 Aldose reductase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 48.607 48.901 2 0.014324 54943 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 70.67 46.038 267520000 0 0 0 0 4164900 0 0 3669100 0 0 50912000 47621000 0 30221000 130940000 54588 1013 49025 458529;458530;458531;458532;458533;458534 362598;362599;362600;362601 362599 3 VAIEHLDK Unmodified 923.50763 0.50763136 1548 P48643 CCT5 T-complex protein 1 subunit epsilon yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25.816 25.359 2 0.0068171 26742 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 95.531 47.682 1041100000 6784000 0 71003000 36823000 39151000 89131000 73942000 48132000 50477000 92519000 94561000 95191000 73690000 82547000 187110000 54589 1548 49026 458535;458536;458537;458538;458539;458540;458541;458542;458543;458544;458545;458546;458547;458548 362602;362603;362604;362605;362606;362607;362608;362609;362610;362611;362612 362608 8 VAIEPGAPR Unmodified 908.50797 0.50796571 2045 Q00796 SORD Sorbitol dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 31.896 32.618 2 0.0051781 35108 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 81.191 49.255 26604000 0 0 0 0 0 0 0 0 0 0 0 10615000 0 0 15989000 54590 2045 49027 458549;458550 362613;362614 362614 1 VAIEPGAPRENDEFCK Unmodified 1830.857 0.85704752 2045 Q00796 SORD Sorbitol dehydrogenase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 47.298 47.836 3 0.00039225 52741 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.409 51.759 72705000 0 0 0 0 0 0 0 0 0 0 12783000 14902000 0 10094000 34925000 54591 2045 49028 458551;458552;458553;458554 362615;362616;362617;362618 362615 4 VAIESAVQQK Unmodified 1071.5924 0.59242362 2852 Q68CP9 ARID2 AT-rich interactive domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 34.11 33.704 2 1.9928E-11 43054 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 178.83 107.92 384650000 0 129200000 1870600 12098000 15520000 19941000 15620000 16409000 13165000 26095000 29481000 31482000 23524000 20929000 29312000 54592 2852 49029 458555;458556;458557;458558;458559;458560;458561;458562;458563;458564;458565;458566;458567;458568;458569 362619;362620;362621;362622;362623;362624;362625;362626;362627;362628;362629;362630;362631;362632;362633 362622 14 VAIEWPGANAQLLEIDQK Unmodified 1994.0473 0.047291129 3895 Q96JJ3 ELMO2 Engulfment and cell motility protein 2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 93.595 89.533 2 0.00012625 111253 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.55 95.644 24573000 0 24573000 0 0 0 0 0 0 0 0 0 0 0 0 0 54593 3895 49030 458570;458571 362634 362634 1 VAIHYINPPNPAK Unmodified 1432.7827 0.78268401 1981 P78406 RAE1 mRNA export factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 2 54.355 54.672 2;3 0.0004306 61439 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.435 63.902 357430000 0 0 0 0 0 0 35103000 44169000 35615000 0 46498000 53774000 30527000 49553000 62189000 54594 1981 49031 458572;458573;458574;458575;458576;458577;458578;458579;458580 362635;362636;362637;362638;362639;362640;362641;362642;362643;362644 362636 9 VAIIEELVVGYETSLK Unmodified 1761.9764 0.9764176 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.43 0.495 4 3 2 4 1 100.51 96.177 2;3 6.4686E-05 117515 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 110.98 103.96 87005000 52615000 29193000 5197900 0 0 0 0 0 0 0 0 0 0 0 0 54595 4226 49032 458581;458582;458583;458584;458585;458586;458587 362645;362646;362647;362648;362649;362650 362650 6 VAILAELDK Unmodified 970.5699 0.56989727 4614 Q9NRY2 INIP SOSS complex subunit C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.616 73.681 2 0.0051384 83910 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 82.426 49.816 134750000 0 0 0 4443000 7993900 10639000 10420000 9084900 7496500 13462000 11036000 22587000 0 12663000 24919000 54596 4614 49033 458588;458589;458590;458591;458592;458593;458594;458595;458596;458597;458598;458599 362651;362652;362653;362654;362655;362656;362657;362658;362659;362660;362661 362658 11 VAILAQLYHEK Unmodified 1283.7238 0.72377215 3834 Q96F63 CCDC97 Coiled-coil domain-containing protein 97 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 71.719 71.922 3 0.030548 82074 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 28.283 15.275 25759000 0 0 0 0 0 3089900 1832900 1300000 2495700 0 3138200 4715700 0 2222400 6964400 54597 3834 49034 458600;458601;458602;458603;458604;458605;458606;458607 362662 362662 1 VAIPIEDVNR Unmodified 1124.619 0.61897272 2386 Q14185 DOCK1 Dedicator of cytokinesis protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 63.444 63.699 2 0.017731 72821 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 48.794 41.899 26015000 0 0 0 0 0 4408100 2735200 2074200 0 3789200 4032200 4124100 0 0 4851800 54598 2386 49035 458608;458609;458610;458611;458612;458613;458614 362663;362664 362664 2 VAISNPPQRK Unmodified 1108.6353 0.63529149 2475 Q15020 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 15.511 15.719 2 0.021068 14279 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 82.241 38.124 63234000 0 0 0 4339300 0 2923700 3546400 0 2428400 4461600 5342600 6999600 7573700 7466800 18152000 54599 2475 49036 458615;458616;458617;458618;458619;458620;458621;458622;458623;458624 362665;362666;362667 362665 3 VAISTFQK Unmodified 892.50182 0.5018177 3928 Q96MW5 COG8 Conserved oligomeric Golgi complex subunit 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 40.7 40.987 2 0.009506 45150 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 82.671 62.116 50231000 0 0 0 0 3313700 5696300 0 0 0 6289800 6433600 9252000 6718300 5064500 7462400 54600 3928 49037 458625;458626;458627;458628;458629;458630;458631;458632 362668;362669;362670;362671;362672;362673 362673 6 VAISTTPLENTSIK Unmodified 1472.8086 0.80862399 2913 Q6P0Q8 MAST2 Microtubule-associated serine/threonine-protein kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 67.326 66.853 2 0.0013376 84910 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.306 66.276 55729000 0 21536000 0 2310100 2718300 2742700 3835900 2057500 3909900 3947800 4037200 5247500 0 3386900 0 54601 2913 49038 458633;458634;458635;458636;458637;458638;458639;458640;458641;458642;458643 362674;362675;362676;362677;362678;362679;362680;362681;362682 362677 9 VAIVKPGVPMEIVLNK Unmodified 1706.0164 0.016448693 5206 Q9Y4L1 HYOU1 Hypoxia up-regulated protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 89.183 81.053 3 0.00091629 105440 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 59.709 55.876 7084400 7084400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54602 5206 49039 458644 362683 362683 1 VAIVTGGTDGIGYSTAK Unmodified 1608.8359 0.83590137 3347 Q8N5I4 DHRSX Dehydrogenase/reductase SDR family member on chromosome X yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.479 62.575 2 1.6754E-28 70761 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 142.91 125.54 254620000 0 0 0 12239000 17676000 17945000 21395000 27716000 12801000 27246000 27238000 34628000 18067000 15819000 21852000 54603 3347 49040 458645;458646;458647;458648;458649;458650;458651;458652;458653;458654;458655;458656 362684;362685;362686;362687;362688;362689;362690;362691;362692;362693;362694;362695;362696 362688 13 VALAAEGR Unmodified 785.43955 0.43955179 3816 Q96EK9 KTI12 Protein KTI12 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 15 2 2 1 2 2 1 1 1 1 1 1 20.747 20.905 2 0.012232 21928 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 75.109 30.498 168310000 0 0 0 14808000 11052000 13539000 0 14053000 13849000 14666000 16884000 21141000 10931000 13887000 23498000 54604 3816 49041 458657;458658;458659;458660;458661;458662;458663;458664;458665;458666;458667;458668;458669;458670;458671 362697;362698;362699;362700;362701 362697 5 VALALLNSK Unmodified 927.57532 0.57531699 1026 P15822 HIVEP1 Zinc finger protein 40 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 66.964 66.428 2 0.020004 75146 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 53.493 27.554 43556000 6827000 0 0 0 2058300 3456400 3977500 2796800 2796300 3799500 3595500 3491600 2814300 3515600 4427500 54605 1026 49042 458672;458673;458674;458675;458676;458677;458678;458679;458680;458681;458682;458683 362702;362703;362704;362705;362706 362704 5 VALATAAQVLENHSK Unmodified 1550.8417 0.84165545 4640 Q9NU19 TBC1D22B TBC1 domain family member 22B yes yes 0 0 0 By MS/MS 2 0 1 1 79.176 71.046 3 0.0017326 93344 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.788 44.042 6363700 6363700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54606 4640 49043 458684 362707 362707 1 VALDLDPYVK Unmodified 1131.6176 0.61757574 639 O95295 SNAPIN SNARE-associated protein Snapin yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.53 2.94 1 2 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 77.821 76.938 2 0.002134 88714 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 86.136 68.75 436630000 284540 276190000 0 9956000 12066000 13453000 12834000 14248000 12645000 18503000 22044000 27303000 17107000 0 0 54607 639 49044 458685;458686;458687;458688;458689;458690;458691;458692;458693;458694;458695;458696;458697;458698;458699 362708;362709;362710;362711;362712;362713;362714;362715;362716;362717;362718;362719;362720;362721 362711 14 VALDMTTLTIMR 2 Oxidation (M) 1395.7102 0.71017227 1898 P62333 PSMC6 26S protease regulatory subunit 10B yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 67.79 67.715 2 0.00018984 77597 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 77.379 57.617 51982000 0 0 0 0 11634000 17792000 0 0 0 0 22555000 0 0 0 0 54608 1898 49045 458700;458701;458702;458703;458704 362722;362723;362724;362725;362726 362722 3076;3077 4 VALDMTTLTIMR Oxidation (M) 1379.7153 0.71525765 1898 P62333 PSMC6 26S protease regulatory subunit 10B yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 15 1 2 2 1 1 2 2 2 1 1 79.409 79.44 2 1.8654E-06 92753 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 112.36 94.921 152340000 0 0 0 4523200 14533000 20744000 0 0 4275500 23454000 33337000 43265000 0 5141400 3066900 54609 1898 49045 458705;458706;458707;458708;458709;458710;458711;458712;458713;458714;458715;458716;458717;458718;458719 362727;362728;362729;362730;362731;362732;362733;362734;362735;362736;362737;362738 362730 3076;3077 12 VALDTLAALLK Unmodified 1126.6962 0.69616041 5063 Q9UPW5 AGTPBP1 Cytosolic carboxypeptidase 1 yes yes 0 0 0 By MS/MS 10 0 1 1 93.635 93.776 2 0.013528 108722 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.462 24.331 1084500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1084500 54610 5063 49046 458720 362739 362739 1 VALEFGSEEPR Unmodified 1232.6037 0.60371659 5045 Q9UNY4 TTF2 Transcription termination factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 59.619 59.672 2 0.0071936 67788 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 67.704 54.112 45486000 0 0 0 3500600 2189800 3851200 3720500 5022500 3653100 5611100 7189400 5561500 5186000 0 0 54611 5045 49047 458721;458722;458723;458724;458725;458726;458727;458728;458729;458730 362740;362741;362742;362743;362744;362745;362746;362747 362743 7 VALENDDRSEEEK Unmodified 1532.6954 0.69544472 4047 Q99700 ATXN2 Ataxin-2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 16.466 16.651 3 0.00069127 17035 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 50.222 38.068 47666000 0 0 0 0 4100300 7685400 0 5761600 4167700 0 10600000 0 0 0 15351000 54612 4047 49048 458731;458732;458733;458734;458735;458736 362748;362749;362750;362751;362752;362753;362754 362749 7 VALEQQLAEEK Unmodified 1256.6612 0.66123147 3353 Q8N5U6 RNF10 RING finger protein 10 yes yes 0 0 0 By matching By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 56.498 49.5 2 0.018802 64081 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.965 75.185 77275000 19283000 57992000 0 0 0 0 0 0 0 0 0 0 0 0 0 54613 3353 49049 458737;458738;458739 362755;362756 362755 1 VALETAEK Unmodified 859.4651 0.46509784 2219 Q12979 ABR Active breakpoint cluster region-related protein yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 24.09 19.589 2 0.010673 26204 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 111.82 63.642 93124000 3399400 89725000 0 0 0 0 0 0 0 0 0 0 0 0 0 54614 2219 49050 458740;458741 362757 362757 1 VALGHGLK Unmodified 793.48102 0.48102268 2163 Q08945 SSRP1 FACT complex subunit SSRP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.268 22.473 2 0.035766 22811 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 52.299 15.271 94855000 0 0 0 3381000 3099000 6604300 5357400 4148700 4919800 10510000 13399000 9965500 12407000 9204100 11858000 54615 2163 49051 458742;458743;458744;458745;458746;458747;458748;458749;458750;458751;458752;458753 362758 362758 1 VALGNTWK Unmodified 887.4865 0.48650199 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45.018 43.953 2 0.006785 49090 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 97.033 52.613 637050000 231630000 107870000 24209000 0 14130000 30819000 22733000 20774000 16921000 27400000 29183000 27688000 19493000 22785000 41417000 54616 643 49052 458754;458755;458756;458757;458758;458759;458760;458761;458762;458763;458764;458765;458766;458767 362759;362760;362761;362762;362763;362764;362765;362766;362767 362766 9 VALHLDEEDK Unmodified 1167.5772 0.57716749 2629 Q16719 KYNU Kynureninase yes yes 0 0 0 By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 36.979 37.309 2 0.0015757 40163 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.84 72.14 77254000 0 0 0 0 0 2110000 2508300 2095700 0 2600900 13109000 11275000 0 8563400 34992000 54617 2629 49053 458768;458769;458770;458771;458772;458773;458774;458775 362768;362769 362768 1 VALIGFPSVGK Unmodified 1086.6437 0.64373091 1753 P55039 DRG2 Developmentally-regulated GTP-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.388 81.449 2 0.00028318 94197 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 93.111 80.754 302220000 0 0 0 13184000 12058000 32044000 19970000 18183000 13644000 39876000 37980000 25868000 17192000 22869000 49354000 54618 1753 49054 458776;458777;458778;458779;458780;458781;458782;458783;458784;458785;458786;458787 362770;362771;362772;362773;362774;362775;362776;362777;362778;362779;362780;362781 362770 12 VALILQNVDLPN Unmodified 1307.7449 0.74490152 2101 Q04446 GBE1 1,4-alpha-glucan-branching enzyme yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 90.387 90.495 2 0.0085476 105276 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.796 39.439 43495000 0 0 0 0 1330700 1797100 1490100 1389600 822030 3892100 6723900 5079200 1748900 3957100 15264000 54619 2101 49055 458788;458789;458790;458791;458792;458793;458794;458795;458796;458797;458798 362782 362782 1 VALLCGPPGLGK Unmodified 1180.6638 0.66381443 3559 Q8WVB6 CHTF18 Chromosome transmission fidelity protein 18 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 74.899 73.814 2 0.0016338 84475 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 66.27 61.696 52199000 14265000 0 0 0 4514200 0 3832900 6378500 0 0 0 0 7320800 7860600 8027300 54620 3559 49056 458799;458800;458801;458802;458803;458804;458805;458806 362783;362784;362785;362786;362787;362788;362789 362786 7 VALLDFGATR Unmodified 1061.5869 0.58694431 3468 Q8NI60 ADCK3 Atypical kinase ADCK3, mitochondrial yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 78.59 78.464 2 0.0060165 90398 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 66.621 21.54 28422000 0 0 0 7605900 5515000 0 7282900 0 0 0 0 0 8018400 0 0 54621 3468 49057 458807;458808;458809;458810 362790;362791;362792 362790 3 VALLDVFR Unmodified 931.5491 0.54910224 1183 P25205 MCM3 DNA replication licensing factor MCM3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 85.886 85.953 2 0.0043449 99649 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 111.04 69.533 262360000 0 0 0 7002600 8493600 21896000 13153000 11845000 15223000 18216000 22881000 25016000 16579000 19547000 82513000 54622 1183 49058 458811;458812;458813;458814;458815;458816;458817;458818;458819;458820;458821;458822 362793;362794;362795;362796;362797;362798;362799;362800;362801;362802;362803 362802 11 VALLEDVNR Unmodified 1027.5662 0.56620887 2295 Q13459 MYO9B Unconventional myosin-IXb yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 56.328 56.297 2 0.012712 63877 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 60.895 37.102 36936000 0 0 0 2681700 4570300 8146200 0 6529000 0 5307900 5308000 0 0 4393100 0 54623 2295 49059 458823;458824;458825;458826;458827;458828;458829 362804;362805 362804 2 VALLPAGGALQHSR Unmodified 1388.7888 0.78883202 5203 Q9Y4H2 IRS2 Insulin receptor substrate 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.882 58.995 3 0.0017419 66981 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 53.403 46.033 312370000 0 0 0 18212000 15432000 27389000 28982000 21203000 18795000 28086000 29553000 29423000 23573000 27103000 44615000 54624 5203 49060 458830;458831;458832;458833;458834;458835;458836;458837;458838;458839;458840;458841 362806;362807;362808;362809;362810;362811;362812;362813;362814;362815 362809 5 VALLPPVLK Unmodified 948.63719 0.63718897 2833 Q5VZK9 LRRC16A Leucine-rich repeat-containing protein 16A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 83.523 82.258 2 0.0075471 94407 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.138 63.193 329650000 74919000 65471000 8242900 8472500 10228000 16805000 12316000 10441000 9549000 19546000 16225000 21388000 11269000 13398000 31378000 54625 2833 49061 458842;458843;458844;458845;458846;458847;458848;458849;458850;458851;458852;458853;458854;458855;458856;458857;458858 362816;362817;362818;362819;362820;362821;362822;362823;362824;362825;362826;362827;362828;362829;362830;362831 362820 16 VALLSGGGSGHEPAHAGFIGK Unmodified 1961.0119 0.011908675 2672 Q3LXA3 DAK Bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase (cyclizing);ATP-dependent dihydroxyacetone kinase;FAD-AMP lyase (cyclizing) yes yes 0 0 0 By MS/MS 10 0 1 1 56.603 57.214 3 0.0052153 64261 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 21.1 10.633 10980000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10980000 54626 2672 49062 458859 362832 362832 1 VALNMAR Unmodified 773.42179 0.42179324 3905 Q96KB5 PBK Lymphokine-activated killer T-cell-originated protein kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 32.835 33.12 2 0.019591 36014 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 109.88 48.875 113520000 0 0 0 13150000 0 0 0 0 0 0 29602000 0 16803000 14312000 39650000 54627 3905 49063 458860;458861;458862;458863;458864 362833;362834;362835;362836 362834 4 VALNVSCANLLDK Unmodified 1415.7442 0.74424959 458 O75131 CPNE3 Copine-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 75.479 75.187 2 3.5443E-11 93034 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.25 98.628 58574000 0 9684000 0 6365100 2304300 6357900 3115300 0 3990600 4882000 6489400 7514000 4016200 3855100 0 54628 458 49064 458865;458866;458867;458868;458869;458870;458871;458872;458873;458874;458875;458876 362837;362838;362839;362840;362841;362842;362843;362844;362845;362846;362847;362848 362840 12 VALPDGTTVTVR Unmodified 1227.6823 0.68230126 3916 Q96L92 SNX27 Sorting nexin-27 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 63.22 63.485 2 0.016799 72492 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 42.336 12.169 45508000 0 0 0 0 0 4852000 0 0 0 6117200 5136000 5620900 4061700 6584700 13135000 54629 3916 49065 458877;458878;458879;458880;458881;458882;458883 362849;362850 362849 1 VALQDLQTNSK Unmodified 1215.6459 0.64591575 5287 Q9Y6J9 TAF6L TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 43.699 42.94 2 0.00029206 48226 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 123.86 95.465 156220000 0 62274000 0 7890500 7338800 0 7904600 11415000 7082400 14019000 8304500 16400000 7849700 5742100 0 54630 5287 49066 458884;458885;458886;458887;458888;458889;458890;458891;458892;458893;458894;458895;458896 362851;362852;362853;362854;362855;362856;362857;362858;362859;362860;362861;362862 362853 12 VALQQSFSK Unmodified 1006.5447 0.54474515 4808 Q9P265 DIP2B Disco-interacting protein 2 homolog B yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.701 38.881 2 0.0052744 42699 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 78.192 35.357 52502000 0 0 0 2200500 2085000 4303800 3041400 3164000 1891000 4269400 6327600 7124100 5185900 3635000 9274500 54631 4808 49067 458897;458898;458899;458900;458901;458902;458903;458904;458905;458906;458907;458908 362863;362864;362865;362866;362867 362867 5 VALQWMVK Unmodified 973.54191 0.54190838 3663 Q92797 SYMPK Symplekin yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 75.499 75.705 2 0.015683 86762 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.485 29.679 10037000 0 0 0 0 0 0 0 0 0 4353500 0 0 0 0 5683200 54632 3663 49068 458909;458910 362868 362868 1 VALRGEDVPLTEQTVSQVLQSAK Unmodified 2467.3282 0.32821702 1861 P61923 COPZ1 Coatomer subunit zeta-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 85.665 85.81 3 2.8334E-124 99201 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 179.42 171.52 83890000 0 0 0 0 0 0 0 0 0 21354000 8302000 0 0 6423300 47810000 54633 1861 49069 458911;458912;458913;458914 362869;362870;362871;362872;362873;362874 362872 6 VALRNDSYTLHK Unmodified 1415.7521 0.75211216 1876 P62195 PSMC5 26S protease regulatory subunit 8 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 31.545 31.709 3 1.5125E-05 35038 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 102.87 71.983 602640000 0 0 0 53122000 60467000 0 0 0 32512000 114000000 146050000 148880000 28354000 19252000 0 54634 1876 49070 458915;458916;458917;458918;458919;458920;458921;458922;458923;458924 362875;362876;362877;362878;362879;362880;362881;362882;362883;362884;362885;362886;362887 362886 13 VALSEPQPER Unmodified 1124.5826 0.58258722 4230 Q9BXP5 SRRT Serrate RNA effector molecule homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.678 34.861 2 0.0063431 37759 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 65.305 41.455 129870000 0 0 0 6825200 4997900 8144600 8316800 7391400 6380100 13116000 15214000 13626000 11452000 10952000 23455000 54635 4230 49071 458925;458926;458927;458928;458929;458930;458931;458932;458933;458934;458935;458936 362888;362889;362890;362891;362892;362893;362894;362895;362896;362897;362898;362899;362900 362893 12 VALSEPQPERR Unmodified 1280.6837 0.68369824 4230 Q9BXP5 SRRT Serrate RNA effector molecule homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 28.267 28.448 3 9.0875E-05 29538 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.653 63.265 467460000 0 0 0 22467000 24082000 33860000 33305000 32128000 23832000 45637000 68661000 55404000 0 36422000 91665000 54636 4230 49072 458937;458938;458939;458940;458941;458942;458943;458944;458945;458946;458947 362901;362902;362903;362904;362905;362906;362907;362908;362909 362904 7 VALSSETEVALAR Unmodified 1344.7249 0.72489436 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 0 0 By MS/MS 2 0 1 1 68.767 62.868 2 0.0091003 80235 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.05 55.798 33930000 0 33930000 0 0 0 0 0 0 0 0 0 0 0 0 0 54637 1226 49073 458948 362910 362910 0 VALSSETEVALARDMTLPPETNVILTK Unmodified 2897.542 0.54197454 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 0 1 By MS/MS 2 0 1 1 97.415 92.641 3 5.6949E-34 114608 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98 92.034 29284000 0 29284000 0 0 0 0 0 0 0 0 0 0 0 0 0 54638 1226 49074 458949 362911 362911 1 VALVGPNGAGK Unmodified 981.56073 0.56072956 4879 Q9UG63 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 2 2 1 2 2 2 1 1 2 1 1 35.287 35.427 2 0.0002696 37381 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 91.064 52.258 464810000 0 0 0 16881000 25679000 37873000 27128000 42217000 23329000 50324000 56506000 44448000 43004000 35567000 61856000 54639 4879 49075 458950;458951;458952;458953;458954;458955;458956;458957;458958;458959;458960;458961;458962;458963;458964;458965;458966;458967 362912;362913;362914;362915;362916;362917;362918;362919;362920;362921;362922;362923;362924 362918 13 VALVNDSLSDVTSTTSSR Unmodified 1850.9222 0.92215019 3073 Q7Z2W4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 2 1 2 2 2 2 2 2 1 1 1 70.592 70.657 2;3 1.6308E-29 81160 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 143.98 122.34 171090000 0 0 0 4589600 10341000 9111400 17473000 20368000 17870000 24701000 25069000 33453000 4716600 3400500 0 54640 3073 49076 458968;458969;458970;458971;458972;458973;458974;458975;458976;458977;458978;458979;458980;458981;458982;458983;458984;458985;458986 362925;362926;362927;362928;362929;362930;362931;362932;362933;362934;362935;362936;362937;362938 362932 14 VALVTGANR Unmodified 899.51886 0.51886475 548 O75828 CBR3 Carbonyl reductase [NADPH] 3 yes yes 0 0 0 By MS/MS 10 0 1 1 29.666 29.705 2 0.048015 32258 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 42.599 12.179 2437200 0 0 0 0 0 0 2437200 0 0 0 0 0 0 0 0 54641 548 49077 458987 362939 362939 1 VALWNEVDGQTK Unmodified 1358.683 0.68302954 2734 Q5JSH3 WDR44 WD repeat-containing protein 44 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.59 2.99 3 1 18 1 2 1 2 2 1 1 1 2 2 2 1 1 2 1 55.016 54.007 2;3 2.0842E-05 87776 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 108.43 90.207 199880000 19286000 42555000 5405400 11557000 10563000 6851600 6491500 5519300 3783100 10509000 22090000 9289100 7967300 16582000 21427000 54642 2734 49078 458988;458989;458990;458991;458992;458993;458994;458995;458996;458997;458998;458999;459000;459001;459002;459003;459004;459005;459006;459007;459008;459009 362940;362941;362942;362943;362944;362945;362946;362947;362948;362949;362950;362951;362952 362944 13 VAMEIQHR Oxidation (M) 998.49675 0.4967491 904 P0CW18 PRSS56 Serine protease 56 yes yes 0 1 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 7.6394 7.7701 2 0.0097114 6215 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 69.998 32.271 30984000 0 0 0 1466400 1257300 1834700 0 957870 1784500 3401500 6882700 6867600 0 2188200 4343200 54643 904 49079 459010;459011;459012;459013;459014;459015;459016;459017;459018;459019 362953;362954;362955 362955 1165 3 VAMFLTDSNNIK Unmodified 1351.6806 0.6805867 2485 Q15046 KARS Lysine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.096 71.17 2 9.3088E-05 81265 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.496 42.034 114970000 0 0 0 2754500 2681600 7724900 4225600 4252300 3571000 6969400 15660000 16020000 4430600 10070000 36609000 54644 2485 49080 459020;459021;459022;459023;459024;459025;459026;459027;459028;459029;459030;459031 362956;362957;362958;362959;362960;362961;362962;362963;362964;362965;362966;362967 362960 11 VAMGAFDK Oxidation (M) 853.40039 0.4003891 944 P11310 ACADM Medium-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 20.243 16.57 2 0.02939 21585 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.26 39.522 76587000 0 76587000 0 0 0 0 0 0 0 0 0 0 0 0 0 54645 944 49081 459032;459033 362968 362968 1 VAMGAFDK Unmodified 837.40547 0.40547447 944 P11310 ACADM Medium-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 37.014 37.496 2 0.037548 40263 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.346 25.519 23455000 0 0 0 0 0 0 0 0 0 3324800 3907300 5508500 0 2247800 8466300 54646 944 49081 459034;459035;459036;459037;459038 362969 362969 1 VAMHYQMSVTLK Oxidation (M) 1422.6999 0.69994194 3351 Q8N5M9 JAGN1 Protein jagunal homolog 1 yes yes 0 1 0 By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 46.674 46.834 2 0.0011502 52090 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 65.347 27.044 47974000 0 0 0 2181900 2263000 4757000 2744200 2609500 4155800 4557800 6010800 8343600 4669800 0 5681000 54647 3351 49082 459039;459040;459041;459042;459043;459044;459045;459046;459047;459048;459049 362970;362971 362971 4929;4930 2 VAMLEENGER Unmodified 1146.5339 0.53392246 3225 Q8IVD9 NUDCD3 NudC domain-containing protein 3 yes yes 0 0 0 By MS/MS 10 0 1 1 32.462 33.178 2 0.032428 35296 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.692 41.133 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54648 3225 49083 459050 362972 362972 1 VAMPVELNEPLNTLQR Oxidation (M) 1838.956 0.95603328 4401 Q9H4L5 OSBPL3 Oxysterol-binding protein-related protein 3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching 10 0 19 2 2 1 1 2 1 2 1 2 2 2 1 76.949 76.982 2 0.0001321 89079 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 71.555 47.173 74672000 0 0 0 5479200 8475200 3636800 4043800 4194500 2842800 12157000 5925200 7610100 7035900 6606000 6665700 54649 4401 49084 459051;459052;459053;459054;459055;459056;459057;459058;459059;459060;459061;459062;459063;459064;459065;459066;459067;459068;459069 362973;362974;362975;362976;362977;362978 362976 5863 5 VAMPVELNEPLNTLQR Unmodified 1822.9611 0.96111866 4401 Q9H4L5 OSBPL3 Oxysterol-binding protein-related protein 3 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 83.975 84.124 2 5.2517E-06 97154 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.597 64.397 10210000 0 0 0 0 0 0 0 0 0 0 0 0 0 4002600 6207500 54650 4401 49084 459070;459071;459072 362979;362980 362980 2 VANEAEFILSR Unmodified 1247.651 0.65100113 1638 P50851 LRBA Lipopolysaccharide-responsive and beige-like anchor protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 71.89 72.017 2 0.00028295 83354 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 93.096 59.833 96097000 0 0 0 0 4283700 10019000 5493000 5759500 4767900 10278000 7964600 11336000 7697700 9089500 19408000 54651 1638 49085 459073;459074;459075;459076;459077;459078;459079;459080;459081;459082;459083 362981;362982;362983;362984;362985;362986;362987;362988;362989;362990;362991 362991 11 VANEPSLK Unmodified 856.46543 0.46543219 2398 Q14244 MAP7 Ensconsin yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20.96 20.33 2 0.0066594 21064 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 98.997 54.304 821660000 7641200 210050000 1143000 34406000 35510000 35717000 60262000 33743000 49886000 48528000 55124000 87107000 56497000 38904000 67141000 54652 2398 49086 459084;459085;459086;459087;459088;459089;459090;459091;459092;459093;459094;459095;459096;459097;459098 362992;362993;362994;362995;362996;362997;362998;362999;363000;363001;363002 362996 10 VANEPVLAFTQGSPERDALQK Unmodified 2269.1703 0.17025981 1258 P30038 ALDH4A1 Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial yes yes 0 0 1 By MS/MS 2 0 1 1 78.365 75.737 3 0.0011825 92046 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 46.362 38.74 6311900 0 0 6311900 0 0 0 0 0 0 0 0 0 0 0 0 54653 1258 49087 459099 363003 363003 1 VANIIAEVAK Unmodified 1026.6073 0.6073454 1685 P52306 RAP1GDS1 Rap1 GTPase-GDP dissociation stimulator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.6 3.67 3 7 1 2 1 1 1 1 1 1 1 69.519 68.575 2 0.0072907 78217 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 62.823 20.714 537240000 0 444520000 30174000 0 0 9403800 5033100 0 0 7454000 9774100 8821700 0 6870600 15193000 54654 1685 49088 459100;459101;459102;459103;459104;459105;459106;459107;459108;459109 363004;363005;363006;363007;363008;363009;363010;363011;363012 363004 7 VANPSGNLTETYVQDR Unmodified 1762.8486 0.84859132 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 54.878 55.009 2 7.8905E-36 62193 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 155.02 143.15 347560000 0 0 0 21037000 21536000 22262000 38756000 13301000 14931000 29039000 37370000 42832000 22958000 26734000 56804000 54655 1124 49089 459110;459111;459112;459113;459114;459115;459116;459117;459118;459119;459120;459121 363013;363014;363015;363016;363017;363018;363019;363020;363021;363022;363023;363024 363022 12 VANPSGNLTETYVQDRGDGMYK Oxidation (M) 2430.1122 0.11215258 1124 P21333 FLNA Filamin-A yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 55.324 55.446 3 4.8181E-76 62711 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 135.73 118.8 353480000 0 0 0 18156000 17792000 35942000 25009000 18048000 25418000 31074000 52535000 49389000 22842000 0 57273000 54656 1124 49090 459122;459123;459124;459125;459126;459127;459128;459129;459130;459131;459132 363025;363026;363027;363028;363029;363030;363031;363032;363033;363034;363035;363036;363037;363038 363035 1611 14 VANPSGNLTETYVQDRGDGMYK Unmodified 2414.1172 0.11723796 1124 P21333 FLNA Filamin-A yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62.651 62.047 3 1.464E-80 69980 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 146.64 143.71 413670000 0 25953000 2686000 10997000 9750700 22428000 14487000 17974000 15484000 32303000 51583000 29464000 21239000 32392000 126930000 54657 1124 49090 459133;459134;459135;459136;459137;459138;459139;459140;459141;459142;459143;459144;459145;459146 363039;363040;363041;363042;363043;363044;363045;363046;363047;363048;363049;363050;363051;363052;363053;363054;363055;363056 363051 18 VANPSSDADGQSLK Unmodified 1387.6579 0.657937 3241 Q8IWI9 MGA MAX gene-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 23.953 24.091 2 0.0039209 25372 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 57.836 41.633 23700000 0 0 0 2072200 2573200 0 2406000 2682300 0 4631700 4262800 0 0 0 5072100 54658 3241 49091 459147;459148;459149;459150;459151;459152;459153;459154 363057;363058;363059;363060;363061;363062;363063;363064;363065 363061 9 VANQIKEEEEK Unmodified 1315.662 0.66195975 5301 Q9Y6Y8 SEC23IP SEC23-interacting protein yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.42 3.09 3 2 19 1 4 1 1 1 2 2 1 2 2 2 1 2 2 13.197 12.607 2;3 7.5143E-13 11602 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 145.25 116.09 261020000 3798300 78946000 0 11046000 11525000 3760900 19028000 15739000 5164300 19054000 14371000 30408000 15093000 13443000 19642000 54659 5301 49092 459155;459156;459157;459158;459159;459160;459161;459162;459163;459164;459165;459166;459167;459168;459169;459170;459171;459172;459173;459174;459175;459176;459177;459178 363066;363067;363068;363069;363070;363071;363072;363073;363074;363075;363076;363077;363078;363079;363080;363081;363082 363080 11 VANTSSFHTTPNTSLGMVQATPSK Unmodified 2475.2064 0.20638732 354 O43683 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 2 1 1 1 1 1 63.128 62.218 3 2.4541E-11 70394 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.625 43.743 55293000 20717000 0 0 0 0 0 0 4251100 0 4175600 6312600 5630300 4518700 0 9687500 54660 354 49093 459179;459180;459181;459182;459183;459184;459185;459186 363083;363084;363085;363086;363087;363088;363089;363090;363091 363084 9 VANTSSFHTTPNTSLGMVQATPSK Oxidation (M) 2491.2013 0.20130194 354 O43683 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 yes yes 0 1 0 By MS/MS 2 0 1 1 61.426 53.171 3 1.4782E-11 71906 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.579 72.037 13119000 13119000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54661 354 49093 459187 363092 363092 442 1 VANTSTQTMGPRPAAAAAAATPAVR Unmodified 2380.2281 0.22812582 958 P11940 PABPC1 Polyadenylate-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 51.522 51.894 3 1.0038E-12 57822 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.801 48.174 33570000 0 0 0 0 0 0 0 0 0 6685400 7644900 0 0 4477900 14762000 54662 958 49094 459188;459189;459190;459191 363093;363094;363095;363096 363094 4 VANTSTQTMGPRPAAAAAAATPAVR Oxidation (M) 2396.223 0.22304044 958 P11940 PABPC1 Polyadenylate-binding protein 1 yes yes 0 1 1 By MS/MS 10 0 1 1 44.111 44.257 3 0.00072372 49497 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 44.052 32.406 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54663 958 49094 459192 363097 363097 1250 1 VANVADVVSK Unmodified 1000.5553 0.55530983 2414 Q14562 DHX8 ATP-dependent RNA helicase DHX8 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.622 39.801 2 0.0029978 44956 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 78.098 31.104 98236000 0 0 0 17473000 4357200 7239300 6283000 5473300 5110400 7161000 8862300 9950300 9455500 6063500 10807000 54664 2414 49095 459193;459194;459195;459196;459197;459198;459199;459200;459201;459202;459203;459204 363098;363099;363100;363101;363102;363103;363104 363103 4 VANVELYYR Unmodified 1125.5819 0.58185893 2040 Q00610 CLTC Clathrin heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 56.588 56.756 2 3.2492E-05 63492 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 151.27 119.33 162310000 0 0 0 0 10650000 15973000 14290000 17631000 4768200 24549000 0 33349000 0 0 41103000 54665 2040 49096 459205;459206;459207;459208;459209;459210;459211;459212;459213 363105;363106;363107;363108;363109;363110;363111;363112;363113;363114;363115;363116 363109 12 VANVIVDHSLQDCVFSK Unmodified 1929.9618 0.96184694 39 A9UHW6 MIF4GD MIF4G domain-containing protein yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 78.72 75.018 3 2.1024E-52 91139 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 141.97 130.36 67400000 0 55418000 11981000 0 0 0 0 0 0 0 0 0 0 0 0 54666 39 49097 459214;459215 363117;363118 363118 1 VANVPNTSLLVNIPQPTPASLK Unmodified 2272.2791 0.27908198 3208 Q86YP4 GATAD2A Transcriptional repressor p66-alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 87.989 88.141 3 0.0012306 102081 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.676 29.023 34988000 0 0 0 0 0 2212100 1570100 3443400 1418600 7549600 4283400 4323000 0 0 10188000 54667 3208 49098 459216;459217;459218;459219;459220;459221;459222;459223 363119;363120;363121;363122;363123 363121 5 VANVSAAEDSVSQR Unmodified 1431.6954 0.69538514 4738 Q9NY93 DDX56 Probable ATP-dependent RNA helicase DDX56 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 35.049 34.876 2 0.00034971 38323 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 96.229 72.199 13269000 0 0 0 3459200 2556600 0 4565200 0 2687500 0 0 0 0 0 0 54668 4738 49099 459224;459225;459226;459227 363124;363125;363126;363127 363124 4 VANVSLLALYK Unmodified 1189.7071 0.70705945 1884 P62266 RPS23 40S ribosomal protein S23 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 83.521 82.403 2 0.00015167 95252 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 108.98 96.689 1104800000 156320000 56323000 13808000 22019000 46531000 61752000 51595000 48011000 65977000 81816000 74904000 92728000 47680000 90208000 195110000 54669 1884 49100 459228;459229;459230;459231;459232;459233;459234;459235;459236;459237;459238;459239;459240;459241;459242;459243 363128;363129;363130;363131;363132;363133;363134;363135;363136;363137;363138;363139;363140;363141;363142;363143;363144;363145 363128 17 VAPADGFSDLAMQVMTSPSK Unmodified 2050.9704 0.97036272 3682 Q92896 GLG1 Golgi apparatus protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 95.095 90.231 3 0.00023386 111837 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 49.768 40.032 22951000 0 22951000 0 0 0 0 0 0 0 0 0 0 0 0 0 54670 3682 49101 459244 363146 363146 1 VAPAEPQEAPDSTAAGGSASK Unmodified 1939.9123 0.91231379 2672 Q3LXA3 DAK Bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase (cyclizing);ATP-dependent dihydroxyacetone kinase;FAD-AMP lyase (cyclizing) yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 1 2 2 1 1 1 2 2 2 2 2 30.906 31.161 2;3 9.5902E-08 33726 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 89.911 83.939 144770000 0 0 0 4968800 4539300 20759000 8872400 4149300 3287200 5898200 16648000 18461000 11015000 13938000 32237000 54671 2672 49102 459245;459246;459247;459248;459249;459250;459251;459252;459253;459254;459255;459256;459257;459258;459259;459260;459261;459262;459263 363147;363148;363149;363150;363151;363152;363153;363154;363155;363156;363157;363158;363159;363160;363161 363155 14 VAPAPAAADAEVEQTDAESK Unmodified 1968.9276 0.9276295 372 O43823 AKAP8 A-kinase anchor protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 46.323 46.49 2;3 6.8958E-63 51871 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 164.93 159.44 713260000 0 0 0 43015000 43905000 46784000 42615000 36737000 39752000 71187000 66786000 90628000 76959000 64493000 90399000 54672 372 49103 459264;459265;459266;459267;459268;459269;459270;459271;459272;459273;459274;459275;459276;459277;459278;459279;459280;459281;459282;459283;459284;459285;459286;459287 363162;363163;363164;363165;363166;363167;363168;363169;363170;363171;363172;363173;363174;363175;363176;363177;363178 363174 16 VAPAPARPSGPSK Unmodified 1233.683 0.68296996 1538 P48444 ARCN1 Coatomer subunit delta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.65 3.65 5 12 2 1 2 1 1 1 1 1 1 1 1 1 1 1 1 16.86 15.909 2;3 1.8887E-07 22843 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 125.97 80.29 1767400000 671690000 46240000 53366000 42268000 30770000 67839000 48205000 47091000 29291000 87530000 113600000 125080000 98297000 117330000 188800000 54673 1538 49104 459288;459289;459290;459291;459292;459293;459294;459295;459296;459297;459298;459299;459300;459301;459302;459303;459304 363179;363180;363181;363182;363183;363184;363185;363186;363187;363188;363189;363190;363191 363185 3 VAPAPAVVK Unmodified 850.52764 0.52763852 1900 P62424 RPL7A 60S ribosomal protein L7a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 30.694 29.665 2 0.0078586 30893 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 71.296 45.677 1571600000 28329000 506800000 4138700 53175000 52296000 57252000 61552000 52731000 59928000 81332000 100040000 117380000 129110000 124040000 143460000 54674 1900 49105 459305;459306;459307;459308;459309;459310;459311;459312;459313;459314;459315;459316;459317;459318;459319;459320 363192;363193;363194;363195;363196;363197;363198;363199;363200;363201;363202;363203;363204;363205 363201 14 VAPAQPSEEGPGR Unmodified 1293.6313 0.63132832 1166 P23588 EIF4B Eukaryotic translation initiation factor 4B yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 20.975 21.327 2 0.00087711 21675 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 68.847 37.773 36894000 0 0 0 2729200 0 0 0 1897000 0 0 6508500 7107900 2339300 6321100 9990600 54675 1166 49106 459321;459322;459323;459324;459325;459326;459327 363206;363207;363208;363209;363210 363207 5 VAPAQPSEEGPGRK Unmodified 1421.7263 0.72629134 1166 P23588 EIF4B Eukaryotic translation initiation factor 4B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 15.587 14.706 3 8.3123E-17 14273 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 106.32 96.89 2112200000 192200000 529670000 258420000 49244000 0 52940000 40273000 40338000 62836000 74375000 191510000 0 73633000 138170000 408600000 54676 1166 49107 459328;459329;459330;459331;459332;459333;459334;459335;459336;459337;459338;459339;459340;459341;459342;459343 363211;363212;363213;363214;363215;363216;363217;363218;363219;363220;363221;363222;363223;363224;363225;363226;363227;363228;363229;363230;363231;363232 363223 21 VAPAQPSEEGPGRKDENK Unmodified 1907.9337 0.93371793 1166 P23588 EIF4B Eukaryotic translation initiation factor 4B yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.52 3.11 5 22 2 1 2 1 2 1 2 2 2 2 2 2 2 2 2 13.392 12.928 3;4 8.2111E-15 12250 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 79.805 75.703 983080000 87431000 21131000 351600000 9956000 25920000 6719800 40177000 32629000 10956000 40928000 54603000 113330000 45968000 48695000 93037000 54677 1166 49108 459344;459345;459346;459347;459348;459349;459350;459351;459352;459353;459354;459355;459356;459357;459358;459359;459360;459361;459362;459363;459364;459365;459366;459367;459368;459369;459370 363233;363234;363235;363236;363237;363238;363239;363240;363241;363242;363243;363244;363245;363246;363247;363248;363249 363235 14 VAPATGDLLSTGTR Unmodified 1357.7201 0.72014333 98 CON__Q6ISB0;CON__Q9NSB2;Q9NSB2 KRT84 Keratin, type II cuticular Hb4 yes no 0 0 0 By MS/MS 10 0 1 1 56.001 56.167 2 0.0016988 63831 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 69.451 48.003 + 9729700 0 0 0 0 0 0 0 9729700 0 0 0 0 0 0 0 54678 98 49109 459371 363250 363250 1 VAPDEHPILLTEAPLNPK Unmodified 1953.0571 0.057127534 2711 Q562R1 ACTBL2 Beta-actin-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 75.454 75.202 3 6.9049E-06 87600 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 74.12 1.3007 32468000000 0 0 0 15108000000 17355000000 0 0 0 0 0 0 5265400 0 0 0 54679 2711 49110 459372;459373;459374 363251;363252;363253 363252 3 VAPEEHPTLLTEAPLNPK Unmodified 1955.0364 0.036392091 1958 P68032;P63267;P68133;P62736 ACTC1;ACTG2;ACTA1;ACTA2 Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, aortic smooth muscle yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.669 70.741 3 0.00072513 81014 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 49.049 33.894 108530000 0 0 0 4370700 5820400 10829000 6096200 7677600 6410200 11752000 12295000 12236000 11050000 7283900 12705000 54680 1958 49111 459375;459376;459377;459378;459379;459380;459381;459382;459383;459384;459385;459386 363254;363255;363256;363257;363258;363259;363260;363261 363255 8 VAPEEHPVLLTEAPLNPK Unmodified 1953.0571 0.057127534 1951;1815 P60709;P63261 ACTB;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.39 3.19 10 1 43 3 5 3 3 3 5 4 3 5 2 6 3 2 4 3 75.011 74.583 2;3;4 4.3935E-84 85147 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 214.23 73.106 238510000000 151590000 3436100000 1081700000 15922000000 18146000000 19120000000 16239000000 16165000000 16521000000 20229000000 22070000000 29072000000 18362000000 18051000000 23946000000 54681 1815;1951 49112 459387;459388;459389;459390;459391;459392;459393;459394;459395;459396;459397;459398;459399;459400;459401;459402;459403;459404;459405;459406;459407;459408;459409;459410;459411;459412;459413;459414;459415;459416;459417;459418;459419;459420;459421;459422;459423;459424;459425;459426;459427;459428;459429;459430;459431;459432;459433;459434;459435;459436;459437;459438;459439;459440 363262;363263;363264;363265;363266;363267;363268;363269;363270;363271;363272;363273;363274;363275;363276;363277;363278;363279;363280;363281;363282;363283;363284;363285;363286;363287;363288;363289;363290;363291;363292;363293;363294;363295;363296;363297;363298;363299;363300;363301;363302;363303;363304;363305;363306;363307;363308;363309;363310;363311;363312;363313;363314;363315;363316;363317;363318;363319;363320;363321;363322;363323;363324;363325;363326;363327;363328;363329;363330;363331;363332;363333;363334;363335;363336;363337;363338;363339;363340;363341;363342;363343;363344;363345;363346;363347;363348;363349;363350;363351;363352;363353;363354;363355;363356;363357;363358;363359;363360;363361 363350 98 VAPEEHPVLLTEAPLNPKANR Unmodified 2294.2383 0.2382798 1951;1815 P60709;P63261 ACTB;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 67.176 67.448 4 0.012954 76440 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 26.742 23.503 120340000 0 0 0 0 0 0 0 13332000 8382600 13540000 13913000 18865000 0 7460100 44849000 54682 1815;1951 49113 459441;459442;459443;459444;459445;459446;459447 363362 363362 1 VAPGFQFFATR Unmodified 1239.64 0.64004252 4641 Q9NU22 MDN1 Midasin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.607 82.669 2 0.0083086 95775 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 61.65 46.499 49162000 0 0 0 1372100 2152000 4385900 2661500 3778200 3185600 2998300 3192300 7392300 6509800 4335400 7198700 54683 4641 49114 459448;459449;459450;459451;459452;459453;459454;459455;459456;459457;459458;459459 363363;363364;363365;363366;363367;363368;363369;363370;363371 363370 9 VAPGPSSGSTPGQVPGSSALSSPR Unmodified 2179.0869 0.086924112 3432 Q8NEY1 NAV1 Neuron navigator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.956 56.082 3 0.0026519 64088 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 25.983 21.127 124880000 0 0 0 5552600 7411500 8729800 8181500 12666000 6543000 11722000 10027000 17853000 11979000 11858000 12354000 54684 3432 49115 459460;459461;459462;459463;459464;459465;459466;459467;459468;459469;459470;459471 363372;363373;363374;363375;363376 363376 5 VAPGPSSGSTPGQVPGSSALSSPRR Unmodified 2335.188 0.18803514 3432 Q8NEY1 NAV1 Neuron navigator 1 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 49.142 49.218 3 3.3537E-23 55000 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 58.952 44.937 123700000 0 0 0 8906200 6325300 0 14987000 9694300 19580000 14460000 0 19859000 16144000 13740000 0 54685 3432 49116 459472;459473;459474;459475;459476;459477;459478;459479;459480 363377;363378;363379;363380;363381;363382;363383 363382 7 VAPGTATAAAGPVADLFR Unmodified 1683.8944 0.8944193 3448 Q8NFH8 REPS2 RalBP1-associated Eps domain-containing protein 2 yes yes 0 0 0 By MS/MS By matching 10 0 3 2 1 84.402 84.522 2 0.0032973 97933 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 38.189 25.628 9002700 0 0 0 0 0 0 0 0 0 5033700 0 3969000 0 0 0 54686 3448 49117 459481;459482;459483 363384;363385 363384 2 VAPHALSEEEK Unmodified 1208.6037 0.60371659 4919 Q9UI26 IPO11 Importin-11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 1 2 2 2 2 2 3 2 1 2 2 17.876 18.093 2;3 0.0027436 18622 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 51.727 31.737 202670000 0 0 0 12684000 6999300 27557000 11400000 11296000 7475100 19582000 21353000 28862000 13646000 14833000 26983000 54687 4919 49118 459484;459485;459486;459487;459488;459489;459490;459491;459492;459493;459494;459495;459496;459497;459498;459499;459500;459501;459502;459503;459504;459505;459506 363386;363387;363388;363389;363390;363391;363392;363393;363394;363395;363396;363397;363398;363399;363400;363401;363402;363403 363402 17 VAPLQESIQAQEK Unmodified 1439.762 0.76200815 3666 Q92817 EVPL Envoplakin yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 49.595 49.369 2 0.00010591 56484 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 98.254 85.97 16193000 0 0 0 11206000 0 0 0 4986900 0 0 0 0 0 0 0 54688 3666 49119 459507;459508 363404 363404 1 VAPPAVLNDISK Unmodified 1222.6921 0.69213767 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71.965 71.478 2 0.00052641 89155 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.538 65.284 797270000 0 149930000 2102500 37040000 39284000 41898000 45858000 52878000 38532000 63881000 65738000 80749000 56209000 53602000 69570000 54689 5216 49120 459509;459510;459511;459512;459513;459514;459515;459516;459517;459518;459519;459520;459521;459522 363405;363406;363407;363408;363409;363410;363411;363412;363413;363414;363415;363416;363417 363408 11 VAPPGLTQIPQIQK Unmodified 1488.8664 0.86641364 793 P05026 ATP1B1 Sodium/potassium-transporting ATPase subunit beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 76.284 76.2 2 0.0021165 88345 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 51.762 40.049 14042000 0 0 0 3586400 0 0 5503800 0 0 0 0 0 4951400 0 0 54690 793 49121 459523;459524;459525 363418;363419 363419 2 VAPQNDSFGTQLPPMHQQQSR Unmodified 2365.1233 0.12332639 3737 Q96AE4 FUBP1 Far upstream element-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60.492 59.288 3 1.7233E-15 67216 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.176 80.372 190880000 29273000 29717000 11346000 4506000 4470200 4839000 6336600 8134900 4851800 11046000 14601000 17776000 0 10743000 33235000 54691 3737 49122 459526;459527;459528;459529;459530;459531;459532;459533;459534;459535;459536;459537;459538;459539 363420;363421;363422;363423;363424;363425;363426;363427;363428;363429;363430;363431;363432;363433;363434;363435 363426 13 VAPQNDSFGTQLPPMHQQQSRSVMTEEYK Unmodified 3332.5554 0.55540955 3737 Q96AE4 FUBP1 Far upstream element-binding protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 75.356 67.226 4 0.0050555 88779 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 28.327 23.453 59549000 59549000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54692 3737 49123 459540 363436;363437 363437 2 VAPSAVLGPNVSIGK Unmodified 1407.8086 0.80856441 3878 Q96IJ6 GMPPA Mannose-1-phosphate guanyltransferase alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 72.186 71.011 2 0.0011178 88475 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.247 62.473 323290000 39350000 115320000 1887900 9383900 8729600 16194000 11271000 10580000 8900600 17389000 14927000 19846000 14698000 12411000 22401000 54693 3878 49124 459541;459542;459543;459544;459545;459546;459547;459548;459549;459550;459551;459552;459553;459554;459555;459556 363438;363439;363440;363441;363442;363443;363444;363445;363446;363447;363448;363449;363450;363451;363452;363453 363442 15 VAPSKWEAVDESELEAQAVTTSK Unmodified 2474.2177 0.21766351 244 O15042 U2SURP U2 snRNP-associated SURP motif-containing protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 75.23 74.48 3 0.0053231 90417 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 31.976 27.79 25423000 0 0 4352200 0 0 0 0 0 0 4892100 0 0 0 0 16179000 54694 244 49125 459557;459558;459559 363454;363455;363456 363456 2 VAPSWPESHSSADSASLAK Unmodified 1925.9119 0.91191986 3061 Q7LBC6 KDM3B Lysine-specific demethylase 3B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 51.004 50.154 3 4.6522E-47 56822 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 129.11 119.32 866130000 0 121620000 12388000 32940000 42031000 63414000 51013000 52793000 26441000 52247000 57062000 116970000 62075000 56938000 118190000 54695 3061 49126 459560;459561;459562;459563;459564;459565;459566;459567;459568;459569;459570;459571;459572;459573;459574 363457;363458;363459;363460;363461;363462;363463;363464;363465;363466;363467;363468;363469;363470;363471;363472;363473;363474;363475;363476;363477;363478;363479;363480;363481 363475 25 VAPVINNGSPTILGK Unmodified 1478.8457 0.8456782 2272 Q13330 MTA1 Metastasis-associated protein MTA1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 69.157 68.533 2 1.5641E-06 77859 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.507 71.892 138790000 0 37016000 0 6010300 5243500 8815800 7937500 8741400 7140200 9368100 10538000 10578000 7801600 8028100 11573000 54696 2272 49127 459575;459576;459577;459578;459579;459580;459581;459582;459583;459584;459585;459586;459587;459588 363482;363483;363484;363485;363486;363487;363488;363489;363490;363491;363492;363493;363494;363495;363496 363487 15 VAPVPLYNSFHDVYK Unmodified 1747.8934 0.89335667 2629 Q16719 KYNU Kynureninase yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 78.03 78.197 3 7.3993E-05 89802 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.175 68.539 194950000 0 0 0 0 0 0 2438500 3783400 3576200 0 0 21047000 3827100 21860000 138410000 54697 2629 49128 459589;459590;459591;459592;459593;459594;459595 363497;363498;363499 363497 3 VAPYRPDQQVEEDDDFMDENQGK Oxidation (M) 2740.1559 0.15586789 3038 Q7KZ85 SUPT6H Transcription elongation factor SPT6 yes yes 0 1 1 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 52.521 52.76 3 1.0779E-05 58910 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 47.808 46.909 20315000 0 0 0 0 0 0 0 3505900 3137500 0 8636800 0 0 5035100 0 54698 3038 49129 459596;459597;459598;459599 363500 363500 4645 1 VAQAPWK Unmodified 798.43882 0.43882351 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 35.904 31.02 2 0.021159 43258 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.54 93.981 441450000 170210000 266090000 5154600 0 0 0 0 0 0 0 0 0 0 0 0 54699 1300 49130 459600;459601;459602 363501;363502 363502 2 VAQASSSQYFRESILNDIR Unmodified 2183.0971 0.097094868 4044 Q99683 MAP3K5 Mitogen-activated protein kinase kinase kinase 5 yes yes 0 0 1 By MS/MS By matching By MS/MS 10 0 3 1 1 1 62.886 62.752 3 0.013086 71732 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 19.553 7.4935 11761000 0 0 0 0 2458000 4148900 5154300 0 0 0 0 0 0 0 0 54700 4044 49131 459603;459604;459605 363503 363503 1 VAQENSSTFGLQTLQK Unmodified 1749.8897 0.88972785 2561 Q15652 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 66.496 65.448 2 1.0142E-26 74942 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 160.15 122.72 55727000 0 22023000 0 2328200 2240600 2563000 4561200 4491900 0 3813000 0 0 0 5581200 8125000 54701 2561 49132 459606;459607;459608;459609;459610;459611;459612;459613;459614;459615;459616;459617 363504;363505;363506;363507;363508;363509;363510;363511;363512 363510 8 VAQETDVR Unmodified 916.46141 0.46140945 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 9.2926 9.3932 2 0.0063466 7638 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 101.64 33.662 98510000 0 0 0 9591800 7328200 8624100 10745000 8749400 6036100 6888800 0 13417000 12472000 0 14658000 54702 3676 49133 459618;459619;459620;459621;459622;459623;459624;459625;459626;459627 363513;363514;363515;363516;363517;363518;363519;363520;363521 363521 7 VAQFLVIYAPR Unmodified 1275.7339 0.7339429 4370 Q9H2M9 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 84.466 84.6 2 0.030993 98124 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 47.198 47.198 22299000 0 0 0 0 0 0 3350100 0 0 3036800 5952700 5126100 2536100 2297500 0 54703 4370 49134 459628;459629;459630;459631;459632;459633 363522;363523 363523 2 VAQGATEK Unmodified 802.41848 0.418482 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 0 0 By MS/MS By MS/MS 1 0 2 1 1 104.89 107.97 2 0.011822 100147 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 108.09 44.877 28273000 11993000 16279000 0 0 0 0 0 0 0 0 0 0 0 0 0 54704 1564 49135 459634;459635 363524 363524 1 VAQGVSGAVQDK Unmodified 1157.6041 0.60405094 964 P12268 IMPDH2 Inosine-5'-monophosphate dehydrogenase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.53 3.84 2 3 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 30.697 30.522 2 6.8911E-37 93082 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 196.88 167.82 978210000 112450000 365390000 1834000 24541000 20827000 26305000 28653000 27761000 23590000 37563000 69039000 64326000 27318000 42050000 106570000 54705 964 49136 459636;459637;459638;459639;459640;459641;459642;459643;459644;459645;459646;459647;459648;459649;459650;459651;459652 363525;363526;363527;363528;363529;363530;363531;363532;363533;363534;363535;363536;363537;363538;363539;363540 363531 15 VAQHLTGASHGDNVK Unmodified 1532.7696 0.76955314 4512 Q9HCE0 EPG5 Ectopic P granules protein 5 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 85.072 80.329 2 0.0060371 99866 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 57.492 23.606 39435000 0 39435000 0 0 0 0 0 0 0 0 0 0 0 0 0 54706 4512 49137 459653 363541;363542 363541 2 VAQILGINIFDK Unmodified 1329.7656 0.76563696 2818 Q5VUA4 ZNF318 Zinc finger protein 318 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 90.047 90.197 2 0.036143 104461 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.512 17.574 4194200 0 0 0 0 0 0 0 0 967870 1071300 0 0 0 0 2155000 54707 2818 49138 459654;459655;459656 363543 363543 1 VAQIQNAGLGEFR Unmodified 1401.7365 0.7364621 5001 Q9ULR0 ISY1 Pre-mRNA-splicing factor ISY1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.685 64.773 2 1.2433E-12 73413 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 149.96 125.93 143650000 0 0 0 5115700 9242800 9912500 9594900 10719000 7417900 12271000 14117000 18064000 12612000 11661000 22927000 54708 5001 49139 459657;459658;459659;459660;459661;459662;459663;459664;459665;459666;459667;459668 363544;363545;363546;363547;363548;363549;363550;363551;363552;363553;363554;363555 363547 12 VAQLCDFNPK Unmodified 1190.5754 0.57539335 886 P09497 CLTB Clathrin light chain B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52.975 52.316 2 0.00046773 58625 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 122.52 83.725 147090000 19321000 0 0 0 6493600 0 10139000 5715100 5302000 9700000 20215000 0 12762000 18039000 39408000 54709 886 49140 459669;459670;459671;459672;459673;459674;459675;459676;459677;459678;459679;459680;459681;459682 363556;363557;363558;363559;363560;363561;363562;363563;363564;363565;363566;363567;363568;363569;363570 363568 12 VAQLEAQCQEPCK Unmodified 1559.7072 0.70721216 759 P02679 FGG Fibrinogen gamma chain yes yes 0 0 0 By MS/MS 10 0 1 1 30.926 30.58 2 0.016267 33658 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 47.261 43.106 3523500 0 0 0 3523500 0 0 0 0 0 0 0 0 0 0 0 54710 759 49141 459683 363571 363571 1 VAQLEQVYIR Unmodified 1217.6768 0.67682195 1895 P62318 SNRPD3 Small nuclear ribonucleoprotein Sm D3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.772 62.867 2 8.6382E-121 73040 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 221.7 172.29 3314100000 0 0 0 207750000 197560000 187650000 229660000 230980000 173230000 306340000 386740000 422450000 236710000 247270000 487830000 54711 1895 49142 459684;459685;459686;459687;459688;459689;459690;459691;459692;459693;459694;459695 363572;363573;363574;363575;363576;363577;363578;363579;363580;363581;363582;363583;363584;363585;363586;363587;363588;363589;363590 363588 19 VAQLQEEVEK Unmodified 1171.6085 0.60846762 672 O95613 PCNT Pericentrin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 34.956 34.495 2 0.0061886 43756 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.623 52.093 38057000 0 18150000 0 2013800 0 0 2209700 0 1280800 3721200 0 0 2838600 2417700 5425600 54712 672 49143 459696;459697;459698;459699;459700;459701;459702;459703 363591;363592 363592 2 VAQLTNFPK Unmodified 1016.5655 0.56548059 3084 Q7Z3K3 POGZ Pogo transposable element with ZNF domain yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 16 1 1 2 1 1 2 1 2 2 1 1 1 51.606 51.803 2 0.008867 58630 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 68.383 31.289 178340000 0 0 0 9026200 9625400 20277000 11168000 9533100 16003000 13778000 18516000 32626000 11952000 8854700 16978000 54713 3084 49144 459704;459705;459706;459707;459708;459709;459710;459711;459712;459713;459714;459715;459716;459717;459718;459719 363593;363594;363595;363596;363597 363594 5 VAQMPQEEVELLPPAPK Oxidation (M) 1890.9761 0.97610002 2493 Q15059 BRD3 Bromodomain-containing protein 3 yes yes 0 1 0 By MS/MS 2 0 1 1 78.997 74.262 2 6.5272E-08 92564 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.46 61.033 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54714 2493 49145 459720 363598 363598 4099 1 VAQMPQEEVELLPPAPK Unmodified 1874.9812 0.9811854 2493 Q15059 BRD3 Bromodomain-containing protein 3 yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 80.192 80.205 2 0.00021939 92860 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 66.498 51.598 20745000 0 0 0 1452100 1106300 0 2108200 0 0 3056200 4333800 0 0 2852100 5836500 54715 2493 49145 459721;459722;459723;459724;459725;459726;459727 363599;363600 363599 2 VAQNSPSVENIQTSQAEQAK Unmodified 2128.0396 0.039639568 3631 Q92576 PHF3 PHD finger protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 2 2 1 1 1 1 1 1 1 42.061 42.116 2;3 4.0265E-58 46734 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 160.78 156.07 88866000 0 0 0 14345000 15681000 0 5486700 0 5189700 10899000 12514000 9452200 7106700 0 8191900 54716 3631 49146 459728;459729;459730;459731;459732;459733;459734;459735;459736;459737;459738 363601;363602;363603;363604;363605;363606;363607;363608;363609 363607 8 VAQPETPVTLQFQGSK Unmodified 1728.9046 0.90464964 3915 Q96L91 EP400 E1A-binding protein p400 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 2 1 1 2 2 1 1 70.507 70.596 2;3 3.3223E-10 81455 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 93.011 86.351 121500000 0 0 0 0 18089000 15380000 16451000 17357000 0 0 0 40394000 0 5408900 8418900 54717 3915 49147 459739;459740;459741;459742;459743;459744;459745;459746;459747;459748 363610;363611;363612;363613;363614;363615;363616;363617 363617 8 VAQPPLSAQATGSGQPTR Unmodified 1764.9119 0.91186028 3149 Q86UK7 ZNF598 Zinc finger protein 598 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 41.795 41.977 2 0.00055994 46659 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 62.042 45.788 20780000 0 0 0 0 2624600 0 2515500 2819900 0 0 0 0 5231800 3465400 4123100 54718 3149 49148 459749;459750;459751;459752;459753;459754;459755;459756 363618;363619;363620;363621;363622 363618 5 VAQPPLSAQATGSGQPTRK Unmodified 1893.0068 0.0068232975 3149 Q86UK7 ZNF598 Zinc finger protein 598 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34.824 34.262 3 1.0947E-25 37867 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 104.61 95.513 524510000 29441000 0 2725300 29068000 29397000 31451000 32572000 29646000 33618000 45241000 59671000 67124000 35801000 37952000 60797000 54719 3149 49149 459757;459758;459759;459760;459761;459762;459763;459764;459765;459766;459767;459768;459769;459770 363623;363624;363625;363626;363627;363628;363629;363630;363631;363632;363633;363634;363635;363636;363637;363638 363637 15 VAQPTITDNK Unmodified 1085.5717 0.57168818 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.33 3.79 1 3 1 10 2 2 1 1 1 1 1 1 1 1 1 1 1 30.446 29.818 2 8.5966E-06 93276 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 141.2 72.982 1223100000 124700000 263270000 4319700 0 48877000 63604000 63376000 53924000 38561000 75221000 107460000 125480000 66759000 0 187490000 54720 1124 49150 459771;459772;459773;459774;459775;459776;459777;459778;459779;459780;459781;459782;459783;459784;459785 363639;363640;363641;363642;363643;363644;363645;363646;363647;363648;363649;363650;363651;363652;363653 363647 11 VAQREEELEETGNQHNDVEIEEAGEEEEK Unmodified 3368.4764 0.47640999 4376 Q9H307 PNN Pinin yes yes 0 0 1 By MS/MS 2 0 1 1 55.631 47.484 4 1.1993E-08 64998 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.377 58.087 15666000 15666000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54721 4376 49151 459786 363654 363654 1 VAQTEFDR Unmodified 964.46141 0.46140945 4592 Q9NR46 SH3GLB2 Endophilin-B2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.915 22.123 2 0.0097473 23276 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 81.89 23.464 265460000 0 0 0 15306000 16984000 19671000 17654000 12824000 14815000 31481000 30802000 36247000 22235000 18754000 28686000 54722 4592 49152 459787;459788;459789;459790;459791;459792;459793;459794;459795;459796;459797;459798 363655;363656;363657;363658;363659;363660;363661;363662 363655 8 VAQTEFDRQAEVTR Unmodified 1648.8169 0.81689726 4592 Q9NR46 SH3GLB2 Endophilin-B2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 1 2 2 1 2 2 2 34.94 35.091 2;3 7.0043E-14 38657 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 101.3 77.113 792390000 0 0 0 40780000 32176000 58229000 43040000 65167000 38121000 108560000 98183000 13224000 134770000 52710000 107430000 54723 4592 49153 459799;459800;459801;459802;459803;459804;459805;459806;459807;459808;459809;459810;459811;459812;459813;459814;459815;459816;459817;459818;459819;459820 363663;363664;363665;363666;363667;363668;363669;363670;363671;363672;363673;363674;363675;363676;363677 363669 15 VAQTGQDLK Unmodified 958.50836 0.50835964 2395 Q14232 EIF2B1 Translation initiation factor eIF-2B subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 2 1 1 1 1 10.735 10.373 2 0.0042645 9191 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 114.28 43.369 276490000 34981000 139010000 0 0 3835800 14276000 7389000 6837000 5323600 9358000 12401000 9189500 6479400 11468000 15948000 54724 2395 49154 459821;459822;459823;459824;459825;459826;459827;459828;459829;459830;459831;459832;459833;459834 363678;363679;363680;363681;363682;363683;363684;363685;363686;363687;363688;363689 363683 8 VAQVAEITYGQK Unmodified 1305.6929 0.69286595 600 O94905 ERLIN2 Erlin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.682 47.844 2 2.4911E-05 52794 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.096 39.128 71844000 0 0 0 6116100 3974300 4938000 4078800 5289900 3662100 7903300 8230700 10449000 6286400 4838500 6077200 54725 600 49155 459835;459836;459837;459838;459839;459840;459841;459842;459843;459844;459845;459846 363690;363691;363692;363693;363694;363695;363696;363697;363698;363699;363700;363701 363693 11 VAQWMIQQPHK Unmodified 1364.7023 0.7023252 1765 P55263 ADK Adenosine kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 58.709 52.161 2;3 0.00022795 70796 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 136.75 103.86 176450000 146370000 24133000 5948400 0 0 0 0 0 0 0 0 0 0 0 0 54726 1765 49156 459847;459848;459849;459850 363702;363703;363704;363705;363706;363707;363708;363709 363707 8 VAQWMIQQPHK Oxidation (M) 1380.6972 0.69723982 1765 P55263 ADK Adenosine kinase yes yes 0 1 0 By MS/MS By MS/MS 2 0 3 2 1 48.612 42.061 2;3 0.00039615 58199 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 105.14 89.985 94691000 83329000 0 11361000 0 0 0 0 0 0 0 0 0 0 0 0 54727 1765 49156 459851;459852;459853 363710;363711 363710 2880 2 VAQYMADVLEDSK Unmodified 1467.6915 0.69154532 1122 P21283 ATP6V1C1 V-type proton ATPase subunit C 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 2 1 6 2 1 1 1 1 1 1 1 73.324 72.212 2 4.4513E-07 90441 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 143.24 127.1 691700000 0 550300000 6809200 0 0 5745000 0 0 0 5127000 5181000 32041000 0 25657000 60840000 54728 1122 49157 459854;459855;459856;459857;459858;459859;459860;459861;459862 363712;363713;363714;363715;363716;363717;363718;363719;363720 363714 8 VAQYMADVLEDSK Oxidation (M) 1483.6865 0.68645994 1122 P21283 ATP6V1C1 V-type proton ATPase subunit C 1 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 54.527 49.179 2 0.037204 63518 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.821 76.602 47497000 0 47497000 0 0 0 0 0 0 0 0 0 0 0 0 0 54729 1122 49157 459863;459864 363721 363721 0 VAQYVVREEDK Unmodified 1334.683 0.68302954 2201 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 1 2 28.641 25.105 2;3 0.014564 31719 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 59.198 31.517 39843000 0 15804000 24039000 0 0 0 0 0 0 0 0 0 0 0 0 54730 2201 49158 459865;459866;459867 363722;363723 363722 0 VAQYVVREEEMGEEEEVEREIIK Oxidation (M) 2808.3488 0.34875404 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 1 2 By MS/MS 2 0 1 1 80.488 72.357 3 9.1019E-55 94960 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 129.32 111.67 18972000 18972000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54731 2451 49159 459868 363724 363724 4026 1 VAQYVVREEEMGEEEEVEREIIK Unmodified 2792.3538 0.35383942 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 0 2 By MS/MS 2 0 2 2 83.166 75.036 3;4 1.8412E-45 98126 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 124.76 97.702 58664000 58664000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54732 2451 49159 459869;459870 363725;363726 363726 2 VARPLPAEEPER Unmodified 1362.7256 0.72556306 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.889 30.081 3 0.00015441 33113 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 73.082 58.824 184790000 0 0 0 16304000 15454000 12182000 12210000 10927000 9916900 13085000 14099000 22678000 14999000 15974000 26958000 54733 1201 49160 459871;459872;459873;459874;459875;459876;459877;459878;459879;459880;459881;459882 363727;363728;363729;363730;363731;363732;363733;363734;363735;363736;363737;363738;363739 363738 13 VARPLPAEEPERAK Unmodified 1561.8576 0.85763986 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 0 2 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.775 24.979 3 0.0040293 26405 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 73.887 68.227 142620000 0 0 0 8635300 7997700 8280300 11659000 8890200 6554700 12742000 13330000 14091000 13077000 7337400 30021000 54734 1201 49161 459883;459884;459885;459886;459887;459888;459889;459890;459891;459892;459893;459894 363740;363741;363742;363743;363744;363745;363746;363747;363748 363740 0 VARPPPIGAEVPDVTATPAR Unmodified 2013.1007 0.10072368 2141 Q07820 MCL1 Induced myeloid leukemia cell differentiation protein Mcl-1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 69.764 69.836 3 3.0529E-05 79432 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 55.688 46.505 54090000 0 0 0 3766700 4802600 3999900 4639800 3447600 2792400 0 8071300 8077300 2987700 3671400 7833600 54735 2141 49162 459895;459896;459897;459898;459899;459900;459901;459902;459903;459904;459905 363749;363750;363751;363752;363753;363754 363752 6 VARTDSPDMHEDT Unmodified 1472.6202 0.62017129 4201 Q9BW61 DDA1 DET1- and DDB1-associated protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2.4 0.49 3 2 1 4 20.126 16.243 2;3 0.0073554 20148 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 70.563 66.095 78732000 6236700 72495000 0 0 0 0 0 0 0 0 0 0 0 0 0 54736 4201 49163 459906;459907;459908;459909;459910 363755;363756;363757 363757 1 VARTDSPDMHEDT Oxidation (M) 1488.6151 0.61508591 4201 Q9BW61 DDA1 DET1- and DDB1-associated protein 1 yes yes 0 1 1 By MS/MS 2.5 0.5 1 1 2 9.5346 6.226 3 0.04559 8168 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 45.357 41 33311000 0 33311000 0 0 0 0 0 0 0 0 0 0 0 0 0 54737 4201 49163 459911;459912 363758 363758 0 VARVEQTETPEMMEAR Unmodified 1875.8819 0.88188206 1694 P52701 MSH6 DNA mismatch repair protein Msh6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 46.224 44.644 3 0.00057205 56241 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 66.673 62.125 33466000 0 0 12397000 0 0 0 0 0 0 0 0 0 0 0 21069000 54738 1694 49164 459913;459914;459915 363759;363760;363761 363761 3 VARVQPEFLQT Unmodified 1286.6983 0.69828568 5149 Q9Y3B2 EXOSC1 Exosome complex component CSL4 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 70.262 64.281 2 0.0098408 79270 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 83.869 71.341 175400000 158130000 0 17263000 0 0 0 0 0 0 0 0 0 0 0 0 54739 5149 49165 459916;459917 363762 363762 0 VASAEYHRK Unmodified 1059.5461 0.54614213 2472 Q15014 MORF4L2 Mortality factor 4-like protein 2 yes yes 0 0 1 By MS/MS 2 0 1 1 6.4796 3.0474 2 0.0042441 6071 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 119.41 93.467 163480000 163480000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54740 2472 49166 459918 363763 363763 1 VASDLDRQEK Unmodified 1159.5833 0.5833155 399 O60437 PPL Periplakin yes yes 0 0 1 By MS/MS By MS/MS 6.5 3.5 1 1 1 1 10.44 8.9244 3 0.013809 6900 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 46.844 20.801 15644000 0 11141000 0 0 0 0 0 0 0 0 4502900 0 0 0 0 54741 399 49167 459919;459920 363764;363765 363765 2 VASDTEEADRTSSK Unmodified 1494.6798 0.67979466 4826 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein yes yes 0 0 1 By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.6604 6.7847 3 0.0058528 5014 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 41.644 36.16 27689000 0 0 0 1845000 1158300 1565300 1846900 1619800 2266700 3022500 3243400 2141600 2566100 2307800 4105400 54742 4826 49168 459921;459922;459923;459924;459925;459926;459927;459928;459929;459930;459931;459932 363766;363767;363768 363768 1 VASGPSPGEGISPQSAQAPQAPGDNHVVPVLR Unmodified 3118.5796 0.57957411 2444 Q14764 MVP Major vault protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.926 73.987 3 1.1179E-62 85343 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 103.16 97.442 129520000 0 0 0 4833100 8726300 10655000 7638500 8487300 6143900 6867400 11580000 16139000 11677000 12562000 24214000 54743 2444 49169 459933;459934;459935;459936;459937;459938;459939;459940;459941;459942;459943;459944 363769;363770;363771;363772;363773;363774;363775;363776;363777;363778;363779;363780;363781 363770 13 VASGQTAGVDK Unmodified 1031.5247 0.52473799 2665 Q32P44 EML3 Echinoderm microtubule-associated protein-like 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 7.8786 7.9988 2 0.0016512 5587 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.349 47.581 24277000 0 0 0 1763900 1158400 1689500 1547500 2220100 1974800 1445800 5661600 0 2376500 1882200 2556500 54744 2665 49170 459945;459946;459947;459948;459949;459950;459951;459952;459953;459954;459955 363782;363783;363784;363785 363783 4 VASGRTTPAPVNQTDREK Unmodified 1925.9919 0.99190151 3432 Q8NEY1 NAV1 Neuron navigator 1 yes yes 0 0 2 By MS/MS 2 0 1 1 21.137 16.317 3 2.0381E-09 23774 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 108.18 99.87 15376000 15376000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54745 3432 49171 459956 363786;363787 363787 2 VASGSTATAAAGPSCALK Unmodified 1618.7985 0.79847001 1428 P41134 ID1 DNA-binding protein inhibitor ID-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 36.582 36.364 2 1.1674E-19 39040 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.55 74.613 88616000 0 10669000 0 4768700 4589500 4150900 4889400 4348700 4919400 6774700 7740700 8494600 7138500 7611600 12520000 54746 1428 49172 459957;459958;459959;459960;459961;459962;459963;459964;459965;459966;459967;459968;459969 363788;363789;363790;363791;363792;363793;363794;363795;363796;363797;363798;363799;363800 363792 13 VASGVLSPPPAAPPPSSSSVPEAGGPPIK Unmodified 2649.4014 0.40138196 3263 Q8IXM2 BAP18 Chromatin complexes subunit BAP18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.972 77.031 3 6.3392E-15 88568 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.122 39.925 79497000 0 0 0 3772000 4311500 5790300 5289700 5176300 5609700 7099900 8552700 8135800 6645800 6001700 13111000 54747 3263 49173 459970;459971;459972;459973;459974;459975;459976;459977;459978;459979;459980;459981 363801;363802;363803;363804;363805;363806;363807;363808;363809;363810;363811;363812 363805 12 VASIQGRPQDTK Unmodified 1298.6943 0.69426293 3823 Q96EV2 RBM33 RNA-binding protein 33 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 1 2 2 1 2 1 1 2 3 2 2 14.24 14.406 2;3 1.8127E-05 13177 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.477 65.67 220650000 0 0 0 10984000 12810000 24569000 11571000 10475000 16449000 21554000 16579000 24293000 19821000 18983000 32567000 54748 3823 49174 459982;459983;459984;459985;459986;459987;459988;459989;459990;459991;459992;459993;459994;459995;459996;459997;459998;459999;460000;460001;460002 363813;363814;363815;363816;363817;363818;363819;363820;363821;363822;363823 363815 10 VASIQGRPQDTKPGVK Unmodified 1679.9319 0.93186744 3823 Q96EV2 RBM33 RNA-binding protein 33 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 2 2 2 2 2 2 1 1 1 2 1 1 21.903 22.042 3;4 0.0006139 22946 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 60.474 42.968 390450000 0 0 0 35790000 32447000 25414000 52271000 35702000 27463000 21276000 34599000 30590000 36054000 24978000 33868000 54749 3823 49175 460003;460004;460005;460006;460007;460008;460009;460010;460011;460012;460013;460014;460015;460016;460017;460018;460019;460020;460021 363824;363825;363826;363827;363828;363829;363830;363831 363826 6 VASLEESEGNK Unmodified 1161.5513 0.55134667 2135 Q07065 CKAP4 Cytoskeleton-associated protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 17.721 17.909 2 0.00025776 16753 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 114.89 80.642 149620000 0 0 0 14184000 10456000 11214000 8638600 7388500 9195600 10337000 13843000 21070000 17730000 10766000 14801000 54750 2135 49176 460022;460023;460024;460025;460026;460027;460028;460029;460030;460031;460032;460033 363832;363833;363834;363835;363836;363837;363838;363839;363840;363841;363842;363843;363844;363845;363846;363847;363848 363837 17 VASMAPVTAEGFQER Unmodified 1591.7664 0.7664416 3723 Q969S3 ZNF622 Zinc finger protein 622 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 62.646 62.813 2 4.1042E-14 71084 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 115.33 95.565 89627000 0 0 0 0 4872200 6170900 4023100 7839100 5871100 8368600 7772700 11437000 7021200 9808300 16443000 54751 3723 49177 460034;460035;460036;460037;460038;460039;460040;460041;460042;460043;460044 363849;363850;363851;363852;363853;363854;363855;363856;363857;363858;363859;363860 363853 12 VASMAPVTAEGFQER Oxidation (M) 1607.7614 0.76135622 3723 Q969S3 ZNF622 Zinc finger protein 622 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 2 49.196 49.48 2 4.6622E-06 54869 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.913 64.796 56435000 0 0 0 0 5903700 0 9262200 0 0 0 7326900 17615000 0 0 16327000 54752 3723 49177 460045;460046;460047;460048;460049;460050;460051;460052;460053;460054 363861;363862;363863;363864;363865;363866;363867;363868 363864 5297 8 VASMPLISSTCDMVSAAYASTK 2 Oxidation (M) 2321.0589 0.058919726 421 O60664 PLIN3 Perilipin-3 yes yes 0 2 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 2 1 1 2 1 2 72.359 72.551 2;3 1.8934E-76 83543 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 137.19 123.47 257220000 0 0 0 0 0 8279000 0 0 0 66274000 14066000 53345000 35741000 8225600 71288000 54753 421 49178 460055;460056;460057;460058;460059;460060;460061;460062;460063;460064 363869;363870;363871;363872;363873;363874;363875;363876 363869 531;532 8 VASMPLISSTCDMVSAAYASTK Oxidation (M) 2305.064 0.064005104 421 O60664 PLIN3 Perilipin-3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 2 1 2 1 1 1 1 2 82.029 82.089 3 2.0261E-26 96017 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.463 91.023 100070000 0 0 0 0 3855000 2657600 0 0 0 26493000 5986100 9036400 3948100 3145100 44945000 54754 421 49178 460065;460066;460067;460068;460069;460070;460071;460072;460073;460074;460075 363877;363878;363879;363880;363881;363882 363881 531;532 6 VASMPLISSTCDMVSAAYASTK Unmodified 2289.0691 0.069090482 421 O60664 PLIN3 Perilipin-3 yes yes 0 0 0 By MS/MS 10 0 1 1 89.725 89.868 3 1.2524E-07 104058 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.086 30.606 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54755 421 49178 460076 363883 363883 1 VASMPQEEQELVVTIPK Oxidation (M) 1912.9816 0.98157933 1189 P25440 BRD2 Bromodomain-containing protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 76.262 75.756 2 3.9779E-36 87513 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 125.28 95.348 111410000 0 36866000 0 5504500 6340100 0 7713700 0 0 14559000 12006000 0 8051900 7313000 13057000 54756 1189 49179 460077;460078;460079;460080;460081;460082;460083;460084;460085 363884;363885;363886;363887;363888;363889;363890;363891;363892;363893 363884 1722 10 VASMPQEEQELVVTIPK Unmodified 1896.9867 0.98666471 1189 P25440 BRD2 Bromodomain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 82.291 81.134 2 7.8605E-13 100290 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.21 119.33 182220000 0 162100000 0 0 2220100 0 0 0 0 0 5481200 0 0 0 12418000 54757 1189 49179 460086;460087;460088;460089 363894;363895;363896;363897 363894 4 VASPTSGVK Unmodified 844.46543 0.46543219 5203 Q9Y4H2 IRS2 Insulin receptor substrate 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.622 13.784 2 0.011037 12193 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 63.419 28.218 61612000 0 0 0 3138100 3804400 4433300 5148100 3363300 3503500 5797500 5527200 6662900 7094700 5949300 7189500 54758 5203 49180 460090;460091;460092;460093;460094;460095;460096;460097;460098;460099;460100;460101 363898;363899;363900;363901;363902;363903;363904 363902 7 VASQGEVVR Unmodified 943.50869 0.50869399 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.039 14.201 2 0.0037825 13214 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 96.367 45.469 104070000 0 0 0 4894800 5686300 8679400 5972100 3564200 3851500 12110000 11830000 13642000 9963100 9310500 14569000 54759 848 49181 460102;460103;460104;460105;460106;460107;460108;460109;460110;460111;460112;460113 363905;363906;363907;363908;363909;363910;363911;363912;363913;363914 363909 9 VASQGEVVRK Unmodified 1071.6037 0.60365701 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 8.9516 8.2471 2 1.5538E-09 6326 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 146.58 87.667 1211300000 168300000 418540000 299190000 12862000 11607000 16785000 14408000 12279000 16209000 24476000 81771000 37193000 32487000 23153000 42009000 54760 848 49182 460114;460115;460116;460117;460118;460119;460120;460121;460122;460123;460124;460125;460126;460127;460128;460129 363915;363916;363917;363918;363919;363920;363921;363922;363923;363924;363925;363926;363927;363928;363929;363930;363931 363916 9 VASRVDEDEDDLEEEHITK Unmodified 2228.0081 0.0080646685 3836 Q96FC9 DDX11 Probable ATP-dependent RNA helicase DDX11 yes yes 0 0 1 By MS/MS 2 0 2 2 50.401 42.5 3;4 5.3285E-07 58688 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.688 69.969 39841000 39841000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54761 3836 49183 460130;460131 363932;363933 363932 2 VASSASEELQSFR Unmodified 1409.6787 0.67867245 457 O75128 COBL Protein cordon-bleu yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 55.026 55.22 2 2.0633E-11 62397 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 143.96 131.91 59934000 0 0 0 4334500 0 4136200 4610700 6717800 4321300 0 5807700 9777900 7129200 4853000 8245400 54762 457 49184 460132;460133;460134;460135;460136;460137;460138;460139;460140;460141 363934;363935;363936;363937;363938;363939;363940;363941;363942;363943 363942 10 VASSPVMVSNPATR Oxidation (M) 1430.7188 0.71876312 1663 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 41.11 41.288 2 3.9026E-19 46689 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 131.37 107.03 559260000 0 0 0 34527000 30802000 45109000 39812000 45279000 35098000 47237000 44219000 86837000 60448000 34254000 55643000 54763 1663 49185 460142;460143;460144;460145;460146;460147;460148;460149;460150;460151;460152;460153;460154 363944;363945;363946;363947;363948;363949;363950;363951;363952;363953;363954;363955;363956;363957;363958;363959 363959 2675 16 VASSPVMVSNPATR Unmodified 1414.7238 0.7238485 1663 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 47.678 47.385 2 3.8109E-08 52160 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.229 89.788 573780000 0 33826000 0 26248000 28108000 35972000 39354000 36562000 23950000 55524000 54694000 70056000 42598000 52871000 74021000 54764 1663 49185 460155;460156;460157;460158;460159;460160;460161;460162;460163;460164;460165;460166;460167 363960;363961;363962;363963;363964;363965;363966;363967;363968;363969;363970;363971 363964 12 VASSPVMVSNPATRMLK Unmodified 1786.9434 0.9433601 1663 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes yes 0 0 1 By MS/MS 2 0 1 1 77.59 69.459 3 0.017565 91439 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 29.274 19.704 14749000 14749000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54765 1663 49186 460168 363972 363972 1 VASSTLLDDR Unmodified 1075.551 0.55095274 430 O60763 USO1 General vesicular transport factor p115 yes yes 0 0 0 By MS/MS 10 0 1 1 40.453 40.492 2 0.027121 45225 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 58.955 33.396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54766 430 49187 460169 363973 363973 1 VASSTLLDDRR Unmodified 1231.6521 0.65206377 430 O60763 USO1 General vesicular transport factor p115 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 32.044 32.183 3 0.00012215 34778 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 73.781 46.452 381660000 0 0 0 26234000 18387000 43221000 26675000 28259000 22031000 48372000 49066000 46295000 46855000 26266000 0 54767 430 49188 460170;460171;460172;460173;460174;460175;460176;460177;460178;460179;460180 363974;363975;363976;363977;363978;363979;363980;363981;363982;363983;363984;363985 363979 8 VASTSQEYDK Unmodified 1126.5142 0.51423288 234 O14976 GAK Cyclin-G-associated kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 9.4036 9.5376 2 0.0016808 8013 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 103.55 90.509 97525000 0 0 0 8659200 6759300 7026600 8702000 7742600 5055500 5587200 12251000 11815000 8131400 6006800 9788400 54768 234 49189 460181;460182;460183;460184;460185;460186;460187;460188;460189;460190;460191;460192 363986;363987;363988;363989;363990;363991;363992;363993;363994;363995;363996;363997;363998 363997 13 VASVAENK Unmodified 816.43413 0.43413207 3311 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 7.6781 4.299 2 0.027441 6529 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.88 42.167 98269000 14728000 83541000 0 0 0 0 0 0 0 0 0 0 0 0 0 54769 3311 49190 460193;460194 363999 363999 0 VASVEMVK Unmodified 861.46299 0.46298935 864 P08243 ASNS Asparagine synthetase [glutamine-hydrolyzing] yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 33.046 32.062 2 0.0079876 33947 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 87.754 39.839 770930000 37866000 544760000 21326000 0 9544600 22567000 13048000 12351000 8589100 18940000 23399000 0 12584000 13841000 32114000 54770 864 49191 460195;460196;460197;460198;460199;460200;460201;460202;460203;460204;460205;460206;460207 364000;364001;364002;364003;364004;364005;364006;364007 364006 5 VASVEMVK Oxidation (M) 877.4579 0.45790397 864 P08243 ASNS Asparagine synthetase [glutamine-hydrolyzing] yes yes 0 1 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 17.966 18.001 2 0.0067592 18253 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 80.229 32.486 26095000 0 0 0 3850100 2620400 7002600 0 0 3154200 6005700 0 0 0 3461600 0 54771 864 49191 460208;460209;460210;460211;460212;460213 364008;364009;364010 364008 1108 3 VASVESQGQEISGNRR Unmodified 1715.8551 0.85507368 2817 Q5VU43 PDE4DIP Myomegalin yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 25.094 25.592 3 0.0021009 26103 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.237 31.41 11618000 0 0 0 0 0 0 0 0 0 0 0 0 0 4633100 6984800 54772 2817 49192 460214;460215 364011 364011 1 VASVFANADK Unmodified 1020.524 0.52400971 3143 Q86U86 PBRM1 Protein polybromo-1 yes yes 0 0 0 By MS/MS 10 0 1 1 36.238 36.97 2 0.023046 40134 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.74 22.311 40533000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40533000 54773 3143 49193 460216 364012 364012 1 VASVFANADKGDDEK Unmodified 1564.7369 0.73691561 3143 Q86U86 PBRM1 Protein polybromo-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.531 33.713 3 0.018669 35695 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 34.18 26.205 80498000 0 0 0 6982700 4666600 3933700 6818200 5312000 3715500 6252400 10820000 9668200 8061300 6375700 7891800 54774 3143 49194 460217;460218;460219;460220;460221;460222;460223;460224;460225;460226;460227;460228 364013;364014 364013 0 VASVSQNAIVSAAGNIAR Unmodified 1726.9326 0.93259572 533 O75694 NUP155 Nuclear pore complex protein Nup155 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.402 75.461 2 9.5044E-54 86603 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 194.24 161.64 238790000 0 0 0 9499700 12516000 27504000 11043000 23364000 11361000 26832000 22587000 30585000 10453000 16560000 36485000 54775 533 49195 460229;460230;460231;460232;460233;460234;460235;460236;460237;460238;460239;460240 364015;364016;364017;364018;364019;364020;364021;364022;364023;364024;364025;364026;364027 364018 13 VASWELRVEGK Unmodified 1272.6826 0.68263561 3688 Q92925 SMARCD2 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 yes yes 0 0 1 By MS/MS 2 0 1 1 64.167 55.888 3 0.013083 75130 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.486 26.572 14777000 14777000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54776 3688 49196 460241 364028 364028 1 VASWLSCNSVSEGGFADSDSHSSFK Unmodified 2660.1449 0.14490928 2486 Q15047 SETDB1 Histone-lysine N-methyltransferase SETDB1 yes yes 0 0 0 By MS/MS 2 0 1 1 81.422 73.292 3 4.6411E-05 96022 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.681 54.842 18625000 18625000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54777 2486 49197 460242 364029 364029 1 VATAEAMTK Unmodified 920.46372 0.46371763 5064 Q9UPZ3 HPS5 Hermansky-Pudlak syndrome 5 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 16.241 15.529 2 0.013982 15508 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 58.981 28.477 49168000 0 19238000 0 0 2386800 3491600 0 0 2527300 0 5798100 9096600 0 0 6629300 54778 5064 49198 460243;460244;460245;460246;460247;460248;460249;460250;460251 364030;364031;364032;364033;364034 364033 5 VATAEAMTK Oxidation (M) 936.45863 0.45863226 5064 Q9UPZ3 HPS5 Hermansky-Pudlak syndrome 5 protein yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 6.8056 6.1865 2 0.0072709 3772 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 63.419 41.648 14587000 0 7483600 0 1363800 1592700 0 0 1544400 0 0 0 0 0 2602700 0 54779 5064 49198 460252;460253;460254;460255;460256 364035;364036;364037 364037 6417 3 VATAQDDITGDGTTSNVLIIGELLK Unmodified 2543.333 0.33302762 1410 P40227 CCT6A T-complex protein 1 subunit zeta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.25 3.77 4 4 8 3 4 1 2 2 2 2 97.276 95.199 2;3 4.6314E-147 113402 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 186.62 183.15 1831500000 35668000 1610800000 154850000 4677700 0 0 0 0 0 10653000 6840300 0 0 0 8008800 54780 1410 49199 460257;460258;460259;460260;460261;460262;460263;460264;460265;460266;460267;460268;460269;460270;460271;460272 364038;364039;364040;364041;364042;364043;364044;364045;364046;364047;364048;364049;364050 364044 12 VATAYRPPALR Unmodified 1213.6931 0.69314072 4242 Q9BY44 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 43.549 43.727 3 0.00022301 48100 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 74.944 59.054 100850000 0 0 0 3610000 1842200 7975800 6221500 0 0 9782100 11997000 13937000 7352100 10191000 27937000 54781 4242 49200 460273;460274;460275;460276;460277;460278;460279;460280;460281;460282 364051;364052;364053;364054;364055;364056;364057;364058 364057 7 VATEFESFSFDATFHAK Unmodified 1932.8894 0.8893935 1458 P42574 CASP3 Caspase-3;Caspase-3 subunit p17;Caspase-3 subunit p12 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 87.927 82.067 3 0.00083212 84657 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 57.52 53.616 27873000 27873000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54782 1458 49201 460283;460284 364059;364060 364059 2 VATGTDLLSGTR Unmodified 1189.6303 0.63026569 481 O75342 ALOX12B Arachidonate 12-lipoxygenase, 12R-type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 50.636 50.403 2 5.6712E-08 57838 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 120.09 71.807 32024000 0 0 0 23641000 0 0 0 8383000 0 0 0 0 0 0 0 54783 481 49202 460285;460286;460287 364061;364062;364063;364064;364065 364064 5 VATLNSEEESDPPTYK Unmodified 1778.821 0.82103917 2033 Q00341 HDLBP Vigilin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 44.6 43.523 2 1.1384E-268 48193 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 248.19 235.57 935970000 14707000 220030000 0 34251000 34507000 57738000 56495000 37440000 40844000 65555000 53721000 70298000 59730000 63130000 127520000 54784 2033 49203 460288;460289;460290;460291;460292;460293;460294;460295;460296;460297;460298;460299;460300;460301;460302 364066;364067;364068;364069;364070;364071;364072;364073;364074;364075;364076;364077;364078;364079;364080 364070 15 VATLPLSSR Unmodified 942.54983 0.54983053 1536 P48382 RFX5 DNA-binding protein RFX5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.072 47.238 2 0.0033124 54140 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 93.429 37.418 359900000 0 0 0 18656000 19146000 23263000 27495000 32131000 27085000 30943000 34467000 46651000 35902000 25489000 38672000 54785 1536 49204 460303;460304;460305;460306;460307;460308;460309;460310;460311;460312;460313;460314 364081;364082;364083;364084;364085;364086;364087;364088;364089;364090;364091;364092;364093 364092 12 VATNAAAQNAIK Unmodified 1170.6357 0.63568542 5201 Q9Y4G6 TLN2 Talin-2 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.795 24 2 0.0013585 24775 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 85.676 65.155 44563000 0 0 0 3581700 2161900 3906900 2445100 2602800 1885500 3764300 4080100 5618300 4386500 3699700 6429700 54786 5201 49205 460315;460316;460317;460318;460319;460320;460321;460322;460323;460324;460325;460326 364094;364095;364096;364097 364095 4 VATNPSFDGR Unmodified 1062.5094 0.50942227 3456 Q8NHH9 ATL2 Atlastin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 28.599 28.771 2 0.021915 31170 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 46.39 21.539 62726000 0 0 0 4112800 3879700 6217700 6588600 0 0 7944300 9861100 13771000 0 0 10351000 54787 3456 49206 460327;460328;460329;460330;460331;460332;460333;460334 364098;364099 364098 2 VATPPPSVLQLNK Unmodified 1362.7871 0.78710068 2854 Q68CZ2 TNS3 Tensin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 68.787 67.852 2 2.355E-06 86110 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.97 86.359 155440000 0 80276000 0 0 0 12444000 11050000 6180200 0 8825100 8360800 9687100 0 0 18612000 54788 2854 49207 460335;460336;460337;460338;460339;460340;460341;460342;460343 364100;364101 364100 1 VATPVDWK Unmodified 914.48617 0.48616764 1261 P30041 PRDX6 Peroxiredoxin-6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 48.439 49.001 2 0.020339 54352 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 62.88 45.186 50135000 0 0 0 0 0 0 0 0 0 0 0 13364000 0 8649900 28121000 54789 1261 49208 460344;460345;460346 364102;364103;364104 364103 3 VATSSLDQTVK Unmodified 1147.6085 0.60846762 4174 Q9BV38 WDR18 WD repeat-containing protein 18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 31.194 31.417 2 0.00033783 32650 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 114.4 95.307 255390000 0 0 0 13098000 15917000 0 0 18185000 10549000 18846000 26994000 33111000 40158000 31866000 46667000 54790 4174 49209 460347;460348;460349;460350;460351;460352;460353;460354;460355;460356 364105;364106;364107;364108;364109;364110;364111;364112;364113;364114 364110 9 VATVPQSEK Unmodified 957.51311 0.51311067 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 13.933 13.748 2 0.0050696 12997 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 84.568 43.066 425720000 0 24013000 0 0 46354000 31257000 40063000 30957000 33464000 0 54737000 67844000 51411000 45615000 0 54791 4139 49210 460357;460358;460359;460360;460361;460362;460363;460364;460365;460366;460367 364115;364116;364117;364118;364119;364120;364121;364122 364119 7 VATVSLPR Unmodified 841.50215 0.50215205 54 CON__P00761 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.48 1.94 6 2 112 3 3 2 18 13 7 7 6 5 8 12 11 9 10 6 64.129 63.942 2 0.0040192 50464 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 146.21 91.681 + 361610000000 4763500000 15909000000 674950000 32922000000 26970000000 24742000000 27201000000 24032000000 25057000000 29763000000 35135000000 37882000000 26883000000 23484000000 26192000000 54792 54 49211 460368;460369;460370;460371;460372;460373;460374;460375;460376;460377;460378;460379;460380;460381;460382;460383;460384;460385;460386;460387;460388;460389;460390;460391;460392;460393;460394;460395;460396;460397;460398;460399;460400;460401;460402;460403;460404;460405;460406;460407;460408;460409;460410;460411;460412;460413;460414;460415;460416;460417;460418;460419;460420;460421;460422;460423;460424;460425;460426;460427;460428;460429;460430;460431;460432;460433;460434;460435;460436;460437;460438;460439;460440;460441;460442;460443;460444;460445;460446;460447;460448;460449;460450;460451;460452;460453;460454;460455;460456;460457;460458;460459;460460;460461;460462;460463;460464;460465;460466;460467;460468;460469;460470;460471;460472;460473;460474;460475;460476;460477;460478;460479;460480;460481;460482;460483;460484;460485;460486;460487 364123;364124;364125;364126;364127;364128;364129;364130;364131;364132;364133;364134;364135;364136;364137;364138;364139;364140;364141;364142;364143;364144;364145;364146;364147;364148;364149;364150;364151;364152;364153;364154;364155;364156;364157;364158;364159;364160;364161;364162;364163;364164;364165;364166;364167;364168;364169;364170;364171;364172;364173;364174;364175;364176;364177;364178;364179;364180;364181;364182;364183;364184;364185;364186;364187;364188;364189;364190;364191;364192;364193;364194;364195;364196;364197;364198;364199;364200;364201;364202;364203;364204;364205;364206;364207;364208;364209;364210;364211;364212;364213;364214;364215;364216;364217;364218;364219;364220;364221;364222;364223;364224;364225;364226;364227;364228;364229;364230;364231;364232;364233;364234;364235;364236;364237;364238;364239;364240;364241;364242;364243;364244;364245;364246;364247;364248;364249;364250;364251;364252;364253;364254;364255;364256;364257;364258;364259;364260;364261;364262;364263;364264;364265;364266;364267;364268;364269;364270;364271;364272;364273;364274;364275;364276;364277;364278;364279;364280;364281;364282;364283;364284;364285;364286;364287;364288;364289;364290;364291;364292;364293;364294;364295;364296;364297;364298;364299;364300;364301;364302;364303;364304;364305;364306;364307;364308;364309;364310;364311;364312;364313;364314;364315;364316;364317;364318;364319;364320;364321;364322;364323;364324;364325;364326;364327;364328;364329;364330;364331;364332;364333;364334;364335;364336;364337;364338;364339;364340;364341;364342;364343;364344;364345;364346;364347;364348;364349;364350;364351;364352;364353;364354;364355 364301 233 VATWFNQPAR Unmodified 1188.604 0.60399136 1203 P26373 RPL13 60S ribosomal protein L13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.429 59.539 2 0.002634 67041 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 81.642 58.214 98989000 0 0 0 5790700 5847100 4498300 5707200 8251100 3627900 9809200 9029000 17569000 7987400 6387000 14485000 54793 1203 49212 460488;460489;460490;460491;460492;460493;460494;460495;460496;460497;460498;460499 364356;364357;364358;364359;364360;364361;364362 364358 7 VATWFNQPARK Unmodified 1316.699 0.69895438 1203 P26373 RPL13 60S ribosomal protein L13 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 46.591 46.825 3 0.0017936 52741 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 42.161 38.299 231620000 0 0 0 0 12128000 16751000 16051000 13756000 14566000 23112000 29934000 46252000 18923000 0 40144000 54794 1203 49213 460500;460501;460502;460503;460504;460505;460506;460507;460508;460509 364363;364364;364365;364366;364367;364368;364369;364370;364371;364372;364373;364374 364363 12 VATWVDETLSSVASK Unmodified 1591.8094 0.80935227 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 5.57 3.85 3 1 3 3 1 1 1 1 84.915 82.806 2;3 2.0619E-14 95496 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 101.72 79.24 216360000 0 198380000 3301600 0 0 0 0 0 0 0 2502700 0 0 3789400 8390100 54795 619 49214 460510;460511;460512;460513;460514;460515;460516 364375;364376;364377;364378 364377 4 VAVATILEK Unmodified 942.57498 0.57498264 5061 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 60.894 60.989 2 0.010868 68484 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.673 37.779 48918000 0 0 0 2935200 3073100 4853100 0 9363400 0 5177500 5061800 4230500 3612900 4175100 6435100 54796 5061 49215 460517;460518;460519;460520;460521;460522;460523;460524;460525;460526 364379;364380;364381;364382;364383;364384 364380 6 VAVATPAKK Unmodified 883.5491 0.54910224 1085 P19338 NCL Nucleolin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 14.027 10.812 2 0.017222 15989 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 123.69 58.886 75786000 53508000 19594000 2682800 0 0 0 0 0 0 0 0 0 0 0 0 54797 1085 49216 460527;460528;460529 364385;364386 364386 0 VAVCDIPPR Unmodified 1025.5328 0.53280025 4160;2306;47 Q13509;Q9BUF5;CON__ENSEMBL:ENSBTAP00000025008;Q9H4B7 TUBB3;TUBB6;TUBB1 Tubulin beta-3 chain;Tubulin beta-6 chain;Tubulin beta-1 chain no no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 2 2 1 2 4 1 44.217 44.427 2 0.011616 48211 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 62.546 46.914 + 36662000 0 0 0 0 0 0 2864000 8581800 0 0 0 0 7049000 18167000 0 54798 2306;4160;47 49217 460530;460531;460532;460533;460534;460535;460536;460537;460538;460539;460540;460541;460542;460543 364387;364388;364389;364390;364391;364392;364393;364394;364395;364396;364397 364391 10 VAVCDIPPRGLK Unmodified 1323.7333 0.73329097 4160;2306 Q13509;Q9BUF5 TUBB3;TUBB6 Tubulin beta-3 chain;Tubulin beta-6 chain no no 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.12 3.39 4 13 2 2 1 2 2 2 2 1 2 1 50.953 49.906 3 0.0011604 71202 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.695 60.156 209430000 45848000 0 3473100 3683800 0 7185300 0 0 7702000 0 45621000 59762000 8027400 20527000 7602300 54799 2306;4160 49218 460544;460545;460546;460547;460548;460549;460550;460551;460552;460553;460554;460555;460556;460557;460558;460559;460560 364398;364399;364400;364401;364402;364403;364404;364405;364406;364407;364408;364409;364410;364411;364412 364400 12 VAVDGNVIR Unmodified 941.52943 0.52942943 1389 P37275 ZEB1 Zinc finger E-box-binding homeobox 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 39.271 39.786 2 0.033277 43114 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.994 2.547 10975000 0 0 0 0 0 0 0 0 0 0 0 0 0 4541800 6433200 54800 1389 49219 460561;460562 364413;364414 364413 2 VAVEEVDEEGK Unmodified 1202.5667 0.56666238 757 P02545 LMNA Prelamin-A/C;Lamin-A/C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 2 1 1 1 1 1 1 1 1 1 1 1 29.765 29.957 2 8.8919E-13 32288 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 153.05 132.14 1218300000 0 0 0 81204000 49140000 73449000 64411000 65513000 48282000 95475000 139410000 137810000 96985000 104510000 262140000 54801 757 49220 460563;460564;460565;460566;460567;460568;460569;460570;460571;460572;460573;460574;460575 364415;364416;364417;364418;364419;364420;364421;364422;364423;364424;364425;364426;364427 364422 10 VAVEYLDPSPEVQK Unmodified 1572.8035 0.80353861 355 O43684 BUB3 Mitotic checkpoint protein BUB3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.42 2 1 1 24 2 2 2 2 2 2 2 2 2 2 2 2 2 66.57 66.246 2;3 2.5507E-40 75818 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 168.69 132.35 3218800000 0 219340000 0 108810000 140900000 167150000 226600000 187610000 189800000 297380000 340460000 272050000 211050000 283740000 573960000 54802 355 49221 460576;460577;460578;460579;460580;460581;460582;460583;460584;460585;460586;460587;460588;460589;460590;460591;460592;460593;460594;460595;460596;460597;460598;460599;460600;460601 364428;364429;364430;364431;364432;364433;364434;364435;364436;364437;364438;364439;364440;364441;364442;364443;364444;364445;364446;364447 364439 19 VAVEYLDPSPEVQKK Unmodified 1700.8985 0.89850163 355 O43684 BUB3 Mitotic checkpoint protein BUB3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 2 2 2 2 2 1 1 2 1 1 2 57.151 57.248 2;3 2.1314E-19 64809 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 108.38 93.219 429730000 0 0 0 53704000 65026000 0 87796000 78568000 2125300 4833300 10292000 40944000 6562200 5599600 74280000 54803 355 49222 460602;460603;460604;460605;460606;460607;460608;460609;460610;460611;460612;460613;460614;460615;460616;460617;460618;460619 364448;364449;364450;364451;364452;364453;364454;364455;364456;364457;364458;364459;364460;364461;364462;364463;364464;364465 364461 18 VAVFFGGLSIK Unmodified 1136.6594 0.65938097 2347 Q13838 DDX39B Spliceosome RNA helicase DDX39B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 88.609 87.842 2 0.0054216 111548 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.985 73.985 31908000 5084600 0 2126900 0 0 3577800 1073100 1643300 1235600 2975900 1950800 2104200 965210 1358700 7812000 54804 2347 49223 460620;460621;460622;460623;460624;460625;460626;460627;460628;460629;460630;460631 364466;364467;364468;364469;364470;364471;364472;364473 364469 8 VAVFTENASEVK Unmodified 1292.6612 0.66123147 4247 Q9BYD6 MRPL1 39S ribosomal protein L1, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 54.307 49.443 2 0.015554 64664 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.416 47.329 666750000 0 659640000 7106200 0 0 0 0 0 0 0 0 0 0 0 0 54805 4247 49224 460632;460633 364474 364474 1 VAVGELTDEDVK Unmodified 1273.6402 0.64016167 1590 P49736 MCM2 DNA replication licensing factor MCM2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 52.948 51.635 2 1.2729E-10 57517 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 145.89 120.96 2454100000 84804000 1811600000 6943500 21280000 19921000 48654000 25618000 27484000 21048000 44812000 68971000 63880000 42283000 56856000 109880000 54806 1590 49225 460634;460635;460636;460637;460638;460639;460640;460641;460642;460643;460644;460645;460646;460647;460648;460649 364475;364476;364477;364478;364479;364480;364481;364482;364483;364484;364485;364486;364487;364488;364489;364490 364480 16 VAVIGGGYCVSK Unmodified 1208.6223 0.62234354 3431 Q8NEX9 SDR9C7 Short-chain dehydrogenase/reductase family 9C member 7 yes yes 0 0 0 By MS/MS 10 0 1 1 52.042 51.401 2 0.030113 58864 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 51.436 13.143 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54807 3431 49226 460650 364491 364491 1 VAVIHQMK Oxidation (M) 940.51642 0.51642191 3076 Q7Z2Z2 EFTUD1 Elongation factor Tu GTP-binding domain-containing protein 1 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 14.224 11.06 2 0.010856 14054 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 99.384 47.153 51793000 33526000 0 18266000 0 0 0 0 0 0 0 0 0 0 0 0 54808 3076 49227 460651;460652 364492;364493;364494 364494 4688 3 VAVLENQNK Unmodified 1013.5506 0.55055881 1034;1080 P16220;P18846 CREB1;ATF1 Cyclic AMP-responsive element-binding protein 1;Cyclic AMP-dependent transcription factor ATF-1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 21.883 22.031 2 3.9E-14 22427 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 170.32 93.263 464820000 0 0 0 33110000 29802000 29772000 37930000 33217000 29832000 48400000 82024000 89568000 0 51168000 0 54809 1034;1080 49228 460653;460654;460655;460656;460657;460658;460659;460660;460661;460662 364495;364496;364497;364498;364499;364500;364501;364502;364503;364504;364505 364499 11 VAVLEQEIK Unmodified 1027.5914 0.59136099 2977 Q6UVJ0 SASS6 Spindle assembly abnormal protein 6 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 52.582 51.946 2 0.0038222 57667 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 88.819 52.939 316260000 0 74303000 0 12152000 17827000 17304000 15634000 22960000 11965000 22167000 22274000 26842000 25037000 20495000 27295000 54810 2977 49229 460663;460664;460665;460666;460667;460668;460669;460670;460671;460672;460673;460674;460675;460676 364506;364507;364508;364509;364510;364511;364512;364513;364514;364515;364516;364517;364518;364519;364520;364521 364513 16 VAVLETQLK Unmodified 999.59645 0.59644637 2839 Q63ZY3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53.544 52.974 2 0.0034509 59935 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 106.36 56.23 463490000 0 84668000 1544100 11816000 12285000 39681000 14775000 14268000 26002000 25313000 75257000 67697000 35447000 15185000 39549000 54811 2839 49230 460677;460678;460679;460680;460681;460682;460683;460684;460685;460686;460687;460688;460689;460690 364522;364523;364524;364525;364526;364527;364528;364529;364530;364531;364532;364533;364534 364522 12 VAVLGASGGIGQPLSLLLK Unmodified 1792.0822 0.082220072 1423 P40926 MDH2 Malate dehydrogenase, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 99.556 91.426 2 2.9416E-09 117825 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.464 89.099 14453000 14453000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54812 1423 49231 460691 364535;364536 364535 2 VAVLGNVDSGK Unmodified 1057.5768 0.57677356 4217 Q9BX10 GTPBP2 GTP-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 41.581 41.707 2 0.0025166 47360 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 67.334 46.813 53805000 0 0 0 3934600 4295900 4125800 4658100 4163600 3108400 5402900 6363200 7734400 5715600 4302900 0 54813 4217 49232 460692;460693;460694;460695;460696;460697;460698;460699;460700;460701;460702 364537;364538;364539;364540;364541;364542;364543;364544;364545;364546;364547 364545 11 VAVLSQNR Unmodified 885.50321 0.50321468 4207 Q9BWD1 ACAT2 Acetyl-CoA acetyltransferase, cytosolic yes yes 0 0 0 By MS/MS 10 0 1 1 22.503 23.154 2 0.038366 23323 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.265 26.661 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54814 4207 49233 460703 364548 364548 1 VAVLSQNRTENAQK Unmodified 1556.8271 0.82706802 4207 Q9BWD1 ACAT2 Acetyl-CoA acetyltransferase, cytosolic yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.56 1.83 1 17 1 1 1 1 2 1 1 2 2 1 1 2 2 21.188 21.114 2;3 1.2181E-29 31638 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 137.95 116.65 1107900000 791950000 0 0 14723000 5393000 10618000 10246000 10082000 7957200 13144000 48852000 48809000 13897000 34419000 97766000 54815 4207 49234 460704;460705;460706;460707;460708;460709;460710;460711;460712;460713;460714;460715;460716;460717;460718;460719;460720;460721 364549;364550;364551;364552;364553;364554;364555;364556;364557;364558;364559;364560;364561;364562;364563 364554 13 VAVLVKPEHENR Unmodified 1389.7728 0.7728476 276 O15357 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 25.381 25.44 3 0.0068189 26805 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 46.88 31.335 44046000 0 0 0 3397400 5275100 0 0 10116000 0 0 0 0 10561000 14696000 0 54816 276 49235 460722;460723;460724;460725;460726 364564 364564 1 VAVNALAVGEPGTASK Unmodified 1482.8042 0.80420731 3915 Q96L91 EP400 E1A-binding protein p400 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.884 58.996 2 0.0041872 66765 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 43.672 27.419 102460000 0 0 0 5368400 5774300 8864000 7658700 7630100 6485100 8334000 9507700 9706500 10709000 9369500 13052000 54817 3915 49236 460727;460728;460729;460730;460731;460732;460733;460734;460735;460736;460737;460738 364565;364566;364567;364568;364569;364570;364571;364572;364573;364574;364575 364569 10 VAVNALAVGEPGTASKPASPIGGPTQEEK Unmodified 2774.445 0.44503769 3915 Q96L91 EP400 E1A-binding protein p400 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By matching 10 0 5 1 1 1 1 1 69.743 69.663 3 0.023645 80057 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 17.435 13.907 18164000 0 0 0 2824800 3040000 0 4923500 3506100 0 0 0 3869300 0 0 0 54818 3915 49237 460739;460740;460741;460742;460743 364576 364576 1 VAVNDAHLLQYNHR Unmodified 1648.8434 0.84338678 1065 P17931 LGALS3 Galectin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 44 4 4 3 3 4 4 4 4 3 4 4 3 47.798 47.939 3;4 5.7576E-43 54308 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 161.1 147.69 2455700000 0 0 0 111720000 57069000 162720000 54325000 161330000 88799000 185040000 295350000 316640000 159740000 289040000 573880000 54819 1065 49238 460744;460745;460746;460747;460748;460749;460750;460751;460752;460753;460754;460755;460756;460757;460758;460759;460760;460761;460762;460763;460764;460765;460766;460767;460768;460769;460770;460771;460772;460773;460774;460775;460776;460777;460778;460779;460780;460781;460782;460783;460784;460785;460786;460787 364577;364578;364579;364580;364581;364582;364583;364584;364585;364586;364587;364588;364589;364590 364583 6 VAVNNFGVK Unmodified 946.52362 0.52361577 4530 Q9HD67 MYO10 Unconventional myosin-X yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 43.407 43.585 2 0.012835 48745 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 60.709 33.222 82570000 0 0 0 5601100 4270700 6331300 5361500 5961200 0 8130300 11091000 11709000 9801700 5327700 8984400 54820 4530 49239 460788;460789;460790;460791;460792;460793;460794;460795;460796;460797;460798 364591;364592 364591 2 VAVPSTIHCDHLIEAQVGGEK Unmodified 2259.1318 0.13176581 4061 Q99798 ACO2 Aconitate hydratase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 71.562 66.049 4 9.4155E-09 86705 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.479 49.879 232890000 182060000 36487000 14342000 0 0 0 0 0 0 0 0 0 0 0 0 54821 4061 49240 460799;460800;460801;460802 364593;364594;364595;364596 364595 4 VAVPTGPTPLDSTPPGGAPHPLTGQEEAR Unmodified 2848.4355 0.43553563 611 O94966 USP19 Ubiquitin carboxyl-terminal hydrolase 19 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 74.005 74.054 3 1.823E-19 84993 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.701 52.39 29648000 0 0 0 0 2271300 8511400 3579700 0 0 0 0 0 0 5772100 9513700 54822 611 49241 460803;460804;460805;460806;460807 364597;364598;364599 364599 3 VAVPTGPTPLDSTPPGGAPHPLTGQEEARAVEK Unmodified 3275.6786 0.67861945 611 O94966 USP19 Ubiquitin carboxyl-terminal hydrolase 19 yes yes 0 0 1 By MS/MS 2 0 1 1 75.36 72.512 4 2.1086E-19 88368 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 66.511 61.299 38691000 0 0 38691000 0 0 0 0 0 0 0 0 0 0 0 0 54823 611 49242 460808 364600;364601 364601 2 VAVQGDVVR Unmodified 941.52943 0.52942943 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 2 1 1 1 30.524 30.759 2 2.4971E-05 32493 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 143.61 57.523 1644900000 0 0 0 97034000 64688000 112150000 93787000 79121000 62497000 134130000 176720000 220420000 135950000 146340000 322050000 54824 848 49243 460809;460810;460811;460812;460813;460814;460815;460816;460817;460818;460819;460820;460821 364602;364603;364604;364605;364606;364607;364608;364609;364610;364611;364612;364613;364614 364604 12 VAVQGDVVRELK Unmodified 1311.751 0.75104953 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 4 1 1 2 56.896 51.443 2;3 0.011305 64181 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 85.533 49.199 59760000 5876800 18728000 35155000 0 0 0 0 0 0 0 0 0 0 0 0 54825 848 49244 460822;460823;460824;460825 364615;364616;364617 364617 2 VAVSDMK Unmodified 748.37893 0.37892537 1126 P21399 ACO1 Cytoplasmic aconitate hydratase yes yes 0 0 0 By MS/MS 2 0 1 1 20.801 17.088 1 0.025449 22492 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.12 43.418 14502000 0 14502000 0 0 0 0 0 0 0 0 0 0 0 0 0 54826 1126 49245 460826 364618 364618 0 VAVTEGCQPSR Unmodified 1202.5714 0.5713706 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.064 20.265 2 3.0126E-05 20758 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 118.18 82.05 154830000 0 0 0 10731000 5872900 11353000 7794400 7394500 5010500 14821000 23617000 17233000 9872000 13094000 28037000 54827 487 49246 460827;460828;460829;460830;460831;460832;460833;460834;460835;460836;460837;460838 364619;364620;364621;364622;364623;364624;364625;364626;364627;364628;364629;364630;364631 364620 13 VAVTEGCQPSRVQAQGPGLK Unmodified 2081.0688 0.068771627 487 O75369 FLNB Filamin-B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 48.036 42.162 3 2.359E-08 57853 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.975 68.672 363990000 329430000 0 34559000 0 0 0 0 0 0 0 0 0 0 0 0 54828 487 49247 460839;460840;460841 364632;364633;364634;364635 364633 4 VAVTSSSSSSSSSSSIPSAEK Unmodified 1970.928 0.92802343 2990 Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.285 33.47 2 3.43E-37 36665 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 137.46 125.07 68157000 0 0 0 3981900 4070500 5428400 4783200 5753200 4661700 5845100 6821100 10396000 6370400 3686000 6360100 54829 2990 49248 460842;460843;460844;460845;460846;460847;460848;460849;460850;460851;460852;460853 364636;364637;364638;364639;364640;364641;364642;364643;364644;364645;364646 364643 11 VAVVAGYGDVGK Unmodified 1133.6081 0.60807369 1164 P23526 AHCY Adenosylhomocysteinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.38 3.93 1 3 2 7 3 2 1 1 1 1 1 1 1 1 58.549 55.873 2 9.2053E-05 54710 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 101.97 54.371 4200100000 218070000 3797800000 33759000 0 0 0 0 0 0 0 0 35577000 0 0 114880000 54830 1164 49249 460854;460855;460856;460857;460858;460859;460860;460861;460862;460863;460864;460865;460866 364647;364648;364649;364650;364651;364652;364653;364654;364655;364656;364657;364658;364659;364660 364655 12 VAVVGNVDAGK Unmodified 1027.5662 0.56620887 124 O00178 GTPBP1 GTP-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.143 34.326 2 0.027446 37009 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 39.848 14.954 135320000 0 0 0 9820400 7500500 11820000 9407900 7701600 6954800 11476000 13011000 19066000 12086000 11642000 14835000 54831 124 49250 460867;460868;460869;460870;460871;460872;460873;460874;460875;460876;460877;460878 364661;364662;364663;364664;364665;364666 364666 6 VAVVNPQPQQWSK Unmodified 1479.7834 0.78341229 3025 Q70E73 RAPH1 Ras-associated and pleckstrin homology domains-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 55.447 54.728 2 2.913E-10 69020 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 148.73 131.26 193520000 0 57342000 0 7511100 8792100 10766000 13298000 9807900 9758700 14760000 17294000 15848000 0 12155000 16185000 54832 3025 49251 460879;460880;460881;460882;460883;460884;460885;460886;460887;460888;460889;460890;460891 364667;364668;364669;364670;364671;364672;364673;364674;364675;364676;364677 364670 11 VAVVNQIAR Unmodified 968.57671 0.57671398 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.09 41.269 2 0.0034047 46691 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 105.39 36.476 318460000 0 0 0 10518000 13873000 30742000 20726000 17382000 14311000 28453000 37366000 35223000 24766000 29887000 55209000 54833 2047 49252 460892;460893;460894;460895;460896;460897;460898;460899;460900;460901;460902;460903 364678;364679;364680;364681;364682;364683;364684;364685;364686;364687;364688;364689;364690;364691 364691 13 VAVVREDK Unmodified 914.51853 0.5185304 2489 Q15054 POLD3 DNA polymerase delta subunit 3 yes yes 0 0 1 By MS/MS 3 0 1 1 12.33 8.9387 2 0.035593 11403 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 110.31 51.392 7472200 0 7472200 0 0 0 0 0 0 0 0 0 0 0 0 0 54834 2489 49253 460904 364692 364692 0 VAVWPVLR Unmodified 938.57017 0.57017204 4196 Q9BVQ7 SPATA5L1 Spermatogenesis-associated protein 5-like protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 79.119 79.293 2 0.037236 91177 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.456 40.387 18703000 0 0 0 0 0 0 0 0 0 0 5045000 3625800 4521100 0 5510800 54835 4196 49254 460905;460906;460907;460908 364693 364693 1 VAVYVPGSK Unmodified 918.51747 0.51746776 4242 Q9BY44 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.31 3.1 1 2 10 1 2 1 1 1 1 1 1 1 1 1 1 44.174 43.077 2 0.0073568 55153 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.162 77.53 879600000 1007800 749530000 0 4929500 3276800 13500000 9049400 6974200 0 12986000 15210000 18281000 0 12665000 32187000 54836 4242 49255 460909;460910;460911;460912;460913;460914;460915;460916;460917;460918;460919;460920;460921 364694;364695;364696;364697;364698;364699;364700;364701;364702;364703;364704 364698 11 VAWVSHDSTVCLADADK Unmodified 1872.8676 0.8676122 256 O15143 ARPC1B Actin-related protein 2/3 complex subunit 1B yes yes 0 0 0 By MS/MS 10 0 1 1 61.686 62.266 3 0.0015186 70415 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.663 40.247 7534600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7534600 54837 256 49256 460922 364705 364705 1 VAYAAQPALK Unmodified 1030.5811 0.58113065 3915 Q96L91 EP400 E1A-binding protein p400 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 39.066 38.514 2 0.0040858 42653 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 74.127 49.205 191160000 0 50308000 0 9032500 8024000 9113800 11762000 9704300 7585200 10997000 12023000 20058000 15023000 13152000 14376000 54838 3915 49257 460923;460924;460925;460926;460927;460928;460929;460930;460931;460932;460933;460934;460935;460936 364706;364707;364708;364709;364710;364711;364712;364713;364714;364715;364716 364712 8 VAYEGSDSEK Unmodified 1083.472 0.47203371 1988 P78549 NTHL1 Endonuclease III-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 10.84 10.957 2 0.0080794 9546 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 60.91 50.496 23285000 0 0 0 1314000 1512100 2277200 2138600 1414800 1315600 2095400 0 4566800 2147500 1540300 2962400 54839 1988 49258 460937;460938;460939;460940;460941;460942;460943;460944;460945;460946;460947 364717;364718;364719;364720;364721;364722;364723;364724;364725;364726 364725 10 VAYFQSALDK Unmodified 1140.5815 0.58152458 4386 Q9H3S7 PTPN23 Tyrosine-protein phosphatase non-receptor type 23 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 59.526 59.546 2 0.0053404 67886 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 82.645 66.172 56867000 0 0 0 4165800 3932500 5997300 5493500 5537600 4376200 6854500 6371900 0 7032200 7105200 0 54840 4386 49259 460948;460949;460950;460951;460952;460953;460954;460955;460956;460957 364727;364728;364729;364730;364731;364732;364733;364734;364735;364736;364737;364738 364728 12 VAYHPYPEDYGDIEIGSHR Unmodified 2217.0127 0.012696536 5203 Q9Y4H2 IRS2 Insulin receptor substrate 2 yes yes 0 0 0 By MS/MS 10 0 1 1 64.548 65.1 3 0.00010593 73904 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.173 47.89 6656500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6656500 54841 5203 49260 460958 364739 364739 1 VAYIPDEMAAQQNPLQQPR Unmodified 2168.0684 0.068437276 153 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 77.813 78.006 3 0.027733 89757 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 24.3 20.113 23304000 0 0 0 0 0 0 0 0 0 0 3858700 4410700 0 4314400 10720000 54842 153 49261 460959;460960;460961;460962 364740 364740 1 VAYQDPSSGCTSK Unmodified 1398.6085 0.60854397 2340 Q13671 RIN1 Ras and Rab interactor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 19.824 20.091 2 0.0024279 19503 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 58.699 51.639 27119000 0 0 0 0 2090300 0 2402900 2771400 0 3147200 4879300 5555500 0 2524000 3748500 54843 2340 49262 460963;460964;460965;460966;460967;460968;460969;460970 364741;364742;364743 364742 3 VAYVSFGPHAGK Unmodified 1231.635 0.63495714 1640 P50914 RPL14 60S ribosomal protein L14 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 1 1 1 1 1 2 1 2 2 1 47.426 47.614 2;3 0.0040565 52822 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 39.413 28.864 372650000 0 0 0 17608000 21101000 19297000 15531000 24994000 14281000 36816000 45271000 50793000 31447000 41815000 53691000 54844 1640 49263 460971;460972;460973;460974;460975;460976;460977;460978;460979;460980;460981;460982;460983;460984;460985 364744;364745;364746;364747;364748;364749;364750;364751 364750 3 VCADLIR Unmodified 845.44292 0.44292261 1817 P60866 RPS20 40S ribosomal protein S20 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 38.874 39.069 2 0.032282 43577 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 73.039 28.066 279440000 0 0 0 21437000 7965400 18125000 0 0 26400000 17445000 39622000 61034000 47912000 19009000 20494000 54845 1817 49264 460986;460987;460988;460989;460990;460991;460992;460993;460994;460995 364752;364753 364752 2 VCAGDDVQTGGPGAEEMR Unmodified 1847.7778 0.77781092 1238 P28715 ERCC5 DNA repair protein complementing XP-G cells yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 39.344 39.567 2 1.4381E-19 43066 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 122.45 116.48 27717000 0 0 0 0 2763200 3254100 3279400 0 0 5082800 0 4179000 0 3287400 5870900 54846 1238 49265 460996;460997;460998;460999;461000;461001;461002 364754;364755;364756;364757;364758 364756 4 VCAGDDVQTGGPGAEEMRINSSTENSDEGLK Unmodified 3222.4041 0.40411344 1238 P28715 ERCC5 DNA repair protein complementing XP-G cells yes yes 0 0 1 By MS/MS 2 0 1 1 63.227 57.333 3 1.1176E-91 73581 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.14 113.31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54847 1238 49266 461003 364759 364759 1 VCAHITNIPFSITK Unmodified 1599.8443 0.84429799 4639 Q9NTZ6 RBM12 RNA-binding protein 12 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.159 76.217 3 0.0022933 87527 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 47.774 27.189 139400000 0 0 0 3254400 2394000 10784000 4442700 4176200 9777000 6671900 10577000 18459000 13122000 15340000 40405000 54848 4639 49267 461004;461005;461006;461007;461008;461009;461010;461011;461012;461013;461014;461015 364760;364761;364762;364763;364764;364765 364762 6 VCALGGSK Unmodified 790.40072 0.40072345 453 O75083 WDR1 WD repeat-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 13.509 9.9236 2 0.014218 13160 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.19 38.738 673810000 26760000 647050000 0 0 0 0 0 0 0 0 0 0 0 0 0 54849 453 49268 461016;461017;461018 364766;364767;364768;364769 364767 3 VCALPTVSGK Unmodified 1030.5481 0.54811597 1277 P30307 CDC25C M-phase inducer phosphatase 3 yes yes 0 0 0 By MS/MS 2 0 1 1 47.928 42.365 2 0.0060707 54974 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.948 54.588 22404000 0 22404000 0 0 0 0 0 0 0 0 0 0 0 0 0 54850 1277 49269 461019 364770 364770 1 VCANHVITK Unmodified 1040.5437 0.54369929 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 17.819 14.351 2 0.0070244 21072 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 102.62 59.498 123490000 62867000 43954000 16666000 0 0 0 0 0 0 0 0 0 0 0 0 54851 1601 49270 461020;461021;461022 364771;364772 364771 2 VCARGEIIGVK Unmodified 1200.6649 0.66487706 2505 Q15181 PPA1 Inorganic pyrophosphatase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 43.218 38.01 3 0.017215 52241 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.013 24.895 2129900000 2073800000 40211000 15875000 0 0 0 0 0 0 0 0 0 0 0 0 54852 2505 49271 461023;461024;461025 364773;364774 364774 2 VCASEKPPK Unmodified 1014.5168 0.51681584 1488 P45974 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 9.326 6.1692 2 0.0053009 9009 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 144.38 120.4 104170000 11719000 90213000 2238000 0 0 0 0 0 0 0 0 0 0 0 0 54853 1488 49272 461026;461027;461028;461029 364775;364776 364775 2 VCASVTFK Unmodified 910.45824 0.45823833 1754 P55060 CSE1L Exportin-2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 42.988 37.029 2 0.0024401 48750 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.83 68.324 507960000 35509000 472450000 0 0 0 0 0 0 0 0 0 0 0 0 0 54854 1754 49273 461030;461031 364777;364778 364777 2 VCDATYDK Unmodified 970.4066 0.40659669 2218 Q12974 PTP4A2 Protein tyrosine phosphatase type IVA 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 10.039 10.18 2 0.027935 8981 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 57.047 38.317 42685000 0 0 0 3413500 2249900 4298500 4234000 3215300 3281200 2319800 5024100 6549100 3689100 2049300 2361300 54855 2218 49274 461032;461033;461034;461035;461036;461037;461038;461039;461040;461041;461042;461043 364779;364780;364781;364782;364783 364780 5 VCDEPHPLLVK Unmodified 1305.6751 0.67510739 1348 P35250 RFC2 Replication factor C subunit 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 46.373 44.979 2;3 0.0011567 60635 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.29 78.603 1006100000 213890 266930000 231380000 23449000 26266000 28079000 20075000 32528000 29168000 42253000 47626000 90117000 52643000 40557000 74822000 54856 1348 49275 461044;461045;461046;461047;461048;461049;461050;461051;461052;461053;461054;461055;461056;461057;461058;461059;461060 364784;364785;364786;364787;364788;364789;364790;364791;364792;364793;364794;364795;364796;364797 364786 13 VCDIAAELAR Unmodified 1116.5597 0.55974328 149 O00410 IPO5 Importin-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 62.022 61.659 2 0.0041248 69938 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.985 55.007 163810000 0 17118000 0 4539000 2910600 13540000 4741000 3834200 5130600 16267000 17177000 21531000 12350000 12391000 32282000 54857 149 49276 461061;461062;461063;461064;461065;461066;461067;461068;461069;461070;461071;461072;461073 364798;364799;364800;364801;364802;364803;364804;364805;364806;364807;364808;364809 364807 12 VCDIILPR Unmodified 984.54264 0.54263666 3383 Q8NAV1 PRPF38A Pre-mRNA-splicing factor 38A yes yes 0 0 0 By MS/MS 10 0 1 1 63.576 62.882 2 0.025168 72612 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 58.917 39.281 20564000 0 0 0 20564000 0 0 0 0 0 0 0 0 0 0 0 54858 3383 49277 461074 364810 364810 1 VCDTLQGENK Unmodified 1162.5288 0.52883709 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 16.754 16.969 2 0.0045809 15678 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.67 69.158 65881000 0 0 0 4149600 0 5027100 4892000 4060800 3639000 3901200 7203300 8889700 7920900 5418300 10780000 54859 2446 49278 461075;461076;461077;461078;461079;461080;461081;461082;461083;461084;461085 364811;364812;364813;364814;364815;364816 364812 6 VCEATYDTTLVEK Unmodified 1527.7127 0.71267469 3710 Q93096 PTP4A1 Protein tyrosine phosphatase type IVA 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 50.797 50.94 2 0.0006929 58244 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 94.82 84.448 91107000 0 0 0 0 19601000 0 12473000 17505000 0 0 0 21770000 19759000 0 0 54860 3710 49279 461086;461087;461088;461089;461090;461091;461092 364817;364818;364819;364820;364821;364822;364823 364823 6 VCEIHFHEINNK Unmodified 1538.73 0.72999651 3797 Q96DH6;O43347 MSI2;MSI1 RNA-binding protein Musashi homolog 2;RNA-binding protein Musashi homolog 1 yes no 0 0 0 By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching 10 0 8 1 1 1 1 1 1 1 1 38.452 38.815 3 0.011364 42984 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 39.702 34.835 54622000 0 0 0 0 0 5522400 0 0 3896900 4619700 3053400 8074500 7053700 5205000 17196000 54861 3797 49280 461093;461094;461095;461096;461097;461098;461099;461100 364824 364824 1 VCENIPIVLCGNK Unmodified 1514.7585 0.75851945 1912 P62826 RAN GTP-binding nuclear protein Ran yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 74.64 74.698 2 4.2251E-09 86068 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 112.75 105.62 198550000 0 0 0 4267300 3355500 0 0 6128400 7348400 0 21871000 57859000 9016100 23192000 65514000 54862 1912 49281 461101;461102;461103;461104;461105;461106;461107;461108;461109;461110 364825;364826;364827;364828;364829;364830;364831;364832;364833 364831 9 VCEVGPK Unmodified 787.38982 0.38982441 2019 P85037 FOXK1 Forkhead box protein K1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 11.451 11.442 2 0.029815 10193 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 75.311 40.205 17961000 0 0 0 4703300 0 6044400 0 7213100 0 0 0 0 0 0 0 54863 2019 49282 461111;461112;461113 364834;364835 364835 2 VCFGDFPTMPK Oxidation (M) 1313.5784 0.57842982 4086 Q9BQ52 ELAC2 Zinc phosphodiesterase ELAC protein 2 yes yes 0 1 0 By MS/MS 2 0 1 1 75.07 70.129 2 0.022213 87757 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 55.567 40.307 23712000 0 23712000 0 0 0 0 0 0 0 0 0 0 0 0 0 54864 4086 49283 461114 364836 364836 1 VCFGDFPTMPK Unmodified 1297.5835 0.58351519 4086 Q9BQ52 ELAC2 Zinc phosphodiesterase ELAC protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 84.65 79.907 2 0.0013904 99320 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.247 78.096 52484000 0 52484000 0 0 0 0 0 0 0 0 0 0 0 0 0 54865 4086 49283 461115 364837 364837 1 VCGDFQDIER Unmodified 1237.5397 0.53973612 3500 Q8TDB6 DTX3L E3 ubiquitin-protein ligase DTX3L yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 46.654 46.889 2 0.0098635 52687 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 64.297 58.931 45366000 0 0 0 0 2081000 4151900 3505000 3118700 3192800 4137700 4037800 5436900 4065700 5752000 5886300 54866 3500 49284 461116;461117;461118;461119;461120;461121;461122;461123;461124;461125;461126 364838;364839;364840;364841 364840 4 VCGDPEVTVDALRK Unmodified 1557.7821 0.78209166 2774 Q5T447 HECTD3 E3 ubiquitin-protein ligase HECTD3 yes yes 0 0 1 By MS/MS 3 0 1 1 59.114 54.294 3 0.016841 66945 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 39.629 33.466 6945200 0 6945200 0 0 0 0 0 0 0 0 0 0 0 0 0 54867 2774 49285 461127 364842 364842 0 VCGDSDK Unmodified 779.31197 0.31196802 1410 P40227 CCT6A T-complex protein 1 subunit zeta yes yes 0 0 0 By MS/MS 1 0 1 1 106.83 112.1 2 0.027727 92843 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 97.068 68.539 51938000 51938000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54868 1410 49286 461128 364843 364843 1 VCGEEGVR Unmodified 904.40727 0.40726539 4423 Q9H6S3 EPS8L2 Epidermal growth factor receptor kinase substrate 8-like protein 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 9.3913 9.6953 2 0.035595 8080 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 52.403 35.476 14664000 0 0 0 0 0 0 0 0 0 0 842110 4076300 3064500 0 6681100 54869 4423 49287 461129;461130;461131;461132 364844 364844 1 VCGHTYEEDAIVR Unmodified 1547.7038 0.70384134 3924 Q96MF7 NSMCE2 E3 SUMO-protein ligase NSE2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.549 37.729 3 0.007748 41949 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 30.308 23.901 95398000 0 0 0 5993900 4682000 5860200 6304000 6046100 7950000 8654900 12355000 12250000 9502600 6782000 9017700 54870 3924 49288 461133;461134;461135;461136;461137;461138;461139;461140;461141;461142;461143;461144 364845;364846;364847;364848 364845 4 VCIDAETLEVGDCVSVIPDDSSK Unmodified 2507.1407 0.1407351 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 4 2 3 3 87.538 82.079 2;3 3.9309E-67 103402 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 177.88 173.71 83779000 19591000 64188000 0 0 0 0 0 0 0 0 0 0 0 0 0 54871 1201 49289 461145;461146;461147;461148;461149;461150 364849;364850;364851;364852;364853 364851 5 VCIELTGLHPK Unmodified 1265.6802 0.68019277 2989 Q6W2J9 BCOR BCL-6 corepressor yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 71.992 66.087 3 0.01341 87509 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 35.496 20.934 14614000 12728000 0 1886800 0 0 0 0 0 0 0 0 0 0 0 0 54872 2989 49290 461151;461152 364854 364854 1 VCIESEHSMDTLLATLK Unmodified 1945.9489 0.94889899 132 O00244 ATOX1 Copper transport protein ATOX1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 90.912 84.399 3 1.5963E-52 106917 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 143.14 128.89 109330000 19320000 90010000 0 0 0 0 0 0 0 0 0 0 0 0 0 54873 132 49291 461153;461154 364855;364856 364855 2 VCIGQILR Unmodified 957.54297 0.54297101 2823 Q5VW36 FOCAD Focadhesin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 69.459 69.517 2 0.020541 79891 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 62.714 24.476 24484000 0 0 0 1936300 2942200 2292800 2961100 2278500 0 1906000 2693500 3147400 1639800 0 2686000 54874 2823 49292 461155;461156;461157;461158;461159;461160;461161;461162;461163;461164 364857;364858;364859 364859 3 VCLAEVYQDK Unmodified 1223.5856 0.58562368 2189 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 56.726 56.071 2 0.0056916 62787 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 80.755 53.501 148120000 0 60432000 0 4410600 6817500 5276200 4152900 5020000 4890400 6312400 8663800 8767200 9368700 9409800 14596000 54875 2189 49293 461165;461166;461167;461168;461169;461170;461171;461172;461173;461174;461175;461176;461177;461178 364860;364861;364862;364863;364864;364865;364866;364867;364868 364865 8 VCLDIIYK Unmodified 1022.5471 0.54705333 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.12 2.32 1 7 1 1 1 1 1 1 1 1 73.979 73.736 2 0.025333 83939 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 58.782 40.243 115910000 0 9979200 0 0 0 0 4015000 0 11420000 12162000 13595000 22771000 0 18669000 23295000 54876 1986 49294 461179;461180;461181;461182;461183;461184;461185;461186 364869;364870 364870 2 VCLDLSPGYSDVK Unmodified 1451.6966 0.6966307 36 A8K2U0 A2ML1 Alpha-2-macroglobulin-like protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 70.542 69.915 2 0.014838 80925 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 49.5 32.475 12752000 0 0 0 12752000 0 0 0 0 0 0 0 0 0 0 0 54877 36 49295 461187 364871 364871 1 VCLEITEDGGDSIEVPGAR Unmodified 2015.947 0.94698474 1383 P36952 SERPINB5 Serpin B5 yes yes 0 0 0 By MS/MS By MS/MS By matching 2.5 0.5 2 2 2 1 1 81.064 76.602 2 2.6146E-17 98070 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 132.86 124.45 40922000 33851000 5225000 1846200 0 0 0 0 0 0 0 0 0 0 0 0 54878 1383 49296 461188;461189;461190;461191 364872;364873;364874;364875;364876 364876 5 VCLEITEDGGDSIEVPGARILQHK Unmodified 2635.3276 0.32756509 1383 P36952 SERPINB5 Serpin B5 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 86.27 80.387 4 0.011948 103208 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 27.471 23.572 24817000 24817000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54879 1383 49297 461192;461193 364877;364878 364878 2 VCLESAVELPK Unmodified 1243.6482 0.64822394 1506 P46736 BRCC3 Lys-63-specific deubiquitinase BRCC36 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.71 3.81 2 1 4 2 1 1 1 2 76.18 72.454 2 0.00060971 90437 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.044 78.773 351040000 0 347890000 3152100 0 0 0 0 0 0 0 0 0 0 0 0 54880 1506 49298 461194;461195;461196;461197;461198;461199;461200 364879;364880;364881;364882;364883;364884;364885 364880 7 VCLEYNEELEK Unmodified 1424.6493 0.64934615 4202 Q9BW66 CINP Cyclin-dependent kinase 2-interacting protein yes yes 0 0 0 By MS/MS 2 0 1 1 62.315 56.421 2 1.055E-06 72376 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.86 110.04 20501000 0 20501000 0 0 0 0 0 0 0 0 0 0 0 0 0 54881 4202 49299 461201 364886;364887 364886 2 VCLGEVLQK Unmodified 1044.5638 0.56376603 671 O95602 POLR1A DNA-directed RNA polymerase I subunit RPA1 yes yes 0 0 0 By MS/MS 10 0 1 1 61.012 61.206 2 0.048871 68636 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 42.396 14.514 28035000 0 0 0 0 0 0 0 0 0 0 0 0 0 28035000 0 54882 671 49300 461202 364888 364888 1 VCLLDVQPHTVK Unmodified 1407.7544 0.75442035 2772 Q5T2T1 MPP7 MAGUK p55 subfamily member 7 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 68.312 62.303 3 0.00010416 83594 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.839 82.914 17104000 11176000 0 5927500 0 0 0 0 0 0 0 0 0 0 0 0 54883 2772 49301 461203;461204 364889;364890;364891 364890 3 VCLLGDTGVGK Unmodified 1117.5801 0.58014438 4985;2336 Q9UL26;Q13636 RAB22A;RAB31 Ras-related protein Rab-22A;Ras-related protein Rab-31 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 55.952 56.271 2 0.0016512 63426 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 71.349 37.26 17744000 0 0 0 0 0 0 0 0 4629300 0 0 8456300 0 4658600 0 54884 4985;2336 49302 461205;461206;461207;461208;461209;461210;461211 364892;364893;364894;364895;364896;364897;364898 364898 6 VCLTDVTIMER Oxidation (M) 1351.6476 0.64757201 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 64.424 64.506 2 0.001459 74122 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 68.735 57.245 98812000 0 0 0 6030800 6096100 10834000 7118700 3810200 0 12137000 10391000 15091000 9622800 6979000 10701000 54885 3676 49303 461212;461213;461214;461215;461216;461217;461218;461219;461220;461221;461222 364899;364900;364901;364902;364903;364904;364905;364906;364907;364908;364909;364910 364910 5221 12 VCLTDVTIMER Unmodified 1335.6527 0.65265739 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 76.238 76.269 2 0.0056326 87152 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 91.636 80.485 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54886 3676 49303 461223;461224;461225;461226 364911;364912;364913;364914 364912 4 VCMDFNIIRK Unmodified 1294.6526 0.65259781 1441 P41252 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 69.709 69.908 3 0.018666 79488 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 28.956 25.635 34976000 0 0 0 0 0 5901000 0 0 2729800 2401400 0 4671800 1895700 3849600 13526000 54887 1441 49304 461227;461228;461229;461230;461231;461232;461233 364915 364915 1 VCMDLNDTFPEYK Oxidation (M) 1646.6956 0.69564442 5118 Q9Y2T3 GDA Guanine deaminase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 67.879 63.103 2 7.4521E-14 80188 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.74 119.76 138590000 0 137060000 1538200 0 0 0 0 0 0 0 0 0 0 0 0 54888 5118 49305 461234;461235;461236;461237 364916;364917;364918;364919 364916 6507 4 VCMVYDLYK Oxidation (M) 1205.5461 0.54606706 1307 P31939 ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 62.371 56.385 2 0.039654 72561 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.981 42.778 126280000 4273300 119410000 2589900 0 0 0 0 0 0 0 0 0 0 0 0 54889 1307 49306 461238;461239;461240 364920 364920 1 VCMVYDLYK Unmodified 1189.5512 0.55115243 1307 P31939 ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS 6.8 3.92 2 3 1 1 1 1 1 73.116 71.721 2 0.02291 89854 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.548 71.561 316720000 0 298500000 4629700 0 0 0 0 0 1515900 0 0 0 1759700 0 10309000 54890 1307 49306 461241;461242;461243;461244;461245 364921;364922;364923 364921 2 VCMYFTYK Unmodified 1110.4878 0.48782389 2522 Q15369 TCEB1 Transcription elongation factor B polypeptide 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 65.964 66.118 2 0.0050366 75020 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 114.78 90.811 111150000 0 0 0 0 3156200 6242500 4077600 5756300 3483600 8495400 14637000 14138000 6461300 8408700 36293000 54891 2522 49307 461246;461247;461248;461249;461250;461251;461252;461253;461254;461255;461256 364924;364925;364926;364927;364928;364929;364930;364931;364932 364928 9 VCNDEQLLLELQQIK Unmodified 1841.9557 0.95569893 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 4 2 2 93.458 89.782 2;3 0.00025078 111386 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.139 42.866 226750000 0 224730000 2018200 0 0 0 0 0 0 0 0 0 0 0 0 54892 3119 49308 461257;461258;461259;461260 364933;364934;364935 364934 3 VCNEVVDTCLYK Unmodified 1498.6796 0.67960042 1368 P35813 PPM1A Protein phosphatase 1A yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 61.277 55.938 2 2.6445E-27 72077 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 185.29 166.98 85406000 0 85406000 0 0 0 0 0 0 0 0 0 0 0 0 0 54893 1368 49309 461261;461262 364936;364937 364936 2 VCNPIITK Unmodified 943.51609 0.51608756 934 P11142 HSPA8 Heat shock cognate 71 kDa protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 4 2 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 37.778 36.493 2 0.0043249 40919 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 111.82 74.987 17911000000 1101800000 9904900000 191990000 267080000 281930000 388420000 381480000 350960000 261220000 493970000 673870000 956280000 508700000 687470000 1461400000 54894 934 49310 461263;461264;461265;461266;461267;461268;461269;461270;461271;461272;461273;461274;461275;461276;461277;461278;461279;461280 364938;364939;364940;364941;364942;364943;364944;364945;364946;364947;364948;364949;364950;364951;364952;364953;364954;364955;364956 364955 15 VCPQIDADNATDNK Unmodified 1559.6886 0.68858521 3101 Q7Z4S6 KIF21A Kinesin-like protein KIF21A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.349 32.536 2 7.0397E-08 35378 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 94.616 88.233 56082000 0 0 0 4604400 2806400 4098900 5778700 4731500 2494500 4954400 7093400 5184200 4152700 4054700 6128100 54895 3101 49311 461281;461282;461283;461284;461285;461286;461287;461288;461289;461290;461291;461292 364957;364958;364959;364960;364961;364962;364963;364964;364965;364966;364967;364968 364962 12 VCPTTETIYNDEFYTK Unmodified 1979.8823 0.88225921 3 A0AVT1 UBA6 Ubiquitin-like modifier-activating enzyme 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 71.687 71.366 2 1.2128E-41 88561 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 186.46 174.98 279130000 0 239460000 0 0 0 3859900 2380400 1887200 0 4473100 6433600 4809300 2424900 4450300 8950100 54896 3 49312 461293;461294;461295;461296;461297;461298;461299;461300;461301;461302;461303 364969;364970;364971;364972;364973;364974;364975 364971 7 VCPVLIELTAPDSNDDVK Unmodified 1983.9823 0.98230761 3524 Q8TF05 PPP4R1 Serine/threonine-protein phosphatase 4 regulatory subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 1 3 2 88.884 85.31 2;3 4.8378E-14 106045 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 152.32 134.58 243700000 0 240120000 3575300 0 0 0 0 0 0 0 0 0 0 0 0 54897 3524 49313 461304;461305;461306;461307;461308;461309 364976;364977;364978;364979;364980;364981 364976 6 VCQGEREMAGDNK Unmodified 1492.6399 0.63986087 1399 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 6.76 3.87 6 1 10 2 3 2 1 1 1 1 1 1 1 1 1 1 9.9226 8.6896 2;3 2.9455E-12 11224 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.96 107.19 324000000 21255000 199430000 20077000 0 4271300 4317700 5671800 4202700 2883400 7469400 0 13228000 7620500 7719900 25853000 54898 1399 49314 461310;461311;461312;461313;461314;461315;461316;461317;461318;461319;461320;461321;461322;461323;461324;461325;461326 364982;364983;364984;364985;364986;364987;364988 364984 6 VCQGEREMAGDNK Oxidation (M) 1508.6348 0.6347755 1399 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 6.1413 3.1821 3 0.0025999 5277 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 65.179 58.742 212270000 23387000 161560000 27326000 0 0 0 0 0 0 0 0 0 0 0 0 54899 1399 49314 461327;461328;461329 364989 364989 2176 1 VCQGIGMVNR Unmodified 1132.5481 0.54813274 5157 Q9Y3C6 PPIL1 Peptidyl-prolyl cis-trans isomerase-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 37.364 37.38 2 0.012209 40738 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 72.789 28.394 2186700 0 0 0 0 0 2186700 0 0 0 0 0 0 0 0 0 54900 5157 49315 461330;461331;461332;461333 364990;364991;364992;364993 364993 4 VCRDNSILPPLDK Unmodified 1525.7923 0.79226242 2136 Q07157 TJP1 Tight junction protein ZO-1 yes yes 0 0 1 By MS/MS 2 0 1 1 67.115 61.199 3 0.036615 78239 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 25.122 2.2368 14726000 0 14726000 0 0 0 0 0 0 0 0 0 0 0 0 0 54901 2136 49316 461334 364994 364994 1 VCSELDNNRHSK Unmodified 1457.6681 0.66812453 1457 P42566 EPS15 Epidermal growth factor receptor substrate 15 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 10.027 6.2521 3 4.6723E-07 10216 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 103.44 87.302 58801000 58801000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54902 1457 49317 461335;461336 364995;364996 364995 2 VCSEVLQMEPDNVNALK Unmodified 1944.9285 0.9284979 2254 Q13217 DNAJC3 DnaJ homolog subfamily C member 3 yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 75.957 76.061 2 3.4813E-18 87388 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 127.17 103.42 23059000 0 0 0 0 1449400 0 0 3026000 0 0 0 3889900 0 5082600 9611400 54903 2254 49318 461337;461338;461339;461340;461341 364997;364998 364997 2 VCSEVLQMEPDNVNALK Oxidation (M) 1960.9234 0.92341252 2254 Q13217 DNAJC3 DnaJ homolog subfamily C member 3 yes yes 0 1 0 By MS/MS 10 0 1 1 64.112 64.31 2 0.00013841 72804 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 67.153 61.547 3305000 0 0 0 0 0 0 0 0 0 0 0 0 0 3305000 0 54904 2254 49318 461342 364999 364999 3674 1 VCSTNDLK Unmodified 935.43823 0.43823117 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 0 0 By MS/MS 2 0 1 1 12.759 9.4646 2 0.027071 12880 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.77 34.159 37767000 0 37767000 0 0 0 0 0 0 0 0 0 0 0 0 0 54905 894 49319 461343 365000 365000 1 VCSVMPASITK Oxidation (M) 1207.5941 0.59407988 2897 Q6NUJ1 PSAPL1 Proactivator polypeptide-like 1;Saposin A-like;Saposin B-Val-like;Saposin B-like;Saposin C-like;Saposin D-like yes yes 0 1 0 By MS/MS 10 0 1 1 36.963 36.494 2 0.012489 40743 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 43.308 24.868 6093200 0 0 0 6093200 0 0 0 0 0 0 0 0 0 0 0 54906 2897 49320 461344 365001 365001 4537 1 VCTESGVTSDHLK Unmodified 1431.6664 0.6663932 634 O95248 SBF1 Myotubularin-related protein 5 yes yes 0 0 0 By MS/MS 2 0 1 1 28.211 23.906 3 0.0050335 31593 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 43.382 35.627 10381000 0 10381000 0 0 0 0 0 0 0 0 0 0 0 0 0 54907 634 49321 461345 365002 365002 1 VCTLAIIDPGDSDIIR Unmodified 1756.9029 0.90293508 1924 P62888 RPL30 60S ribosomal protein L30 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 86.28 86.348 2 1.8252E-27 99951 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 131.37 84.763 147830000 0 0 0 2141400 7036800 5964100 5218200 7563000 8138400 13972000 17242000 24475000 12210000 17690000 26179000 54908 1924 49322 461346;461347;461348;461349;461350;461351;461352;461353;461354;461355;461356;461357 365003;365004;365005;365006;365007;365008;365009;365010;365011;365012;365013;365014 365009 12 VCTNPVDR Unmodified 959.44946 0.44946455 5244 Q9Y5Q8 GTF3C5 General transcription factor 3C polypeptide 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.155 18.343 2 0.036499 18226 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 51.854 34.469 41938000 0 0 0 2672200 3205900 2716300 2828200 2424400 1306900 3696800 3834800 5466900 4363500 4094800 5326800 54909 5244 49323 461358;461359;461360;461361;461362;461363;461364;461365;461366;461367;461368;461369 365015 365015 1 VCVSSPPEPDETHDPK Unmodified 1792.7938 0.79377856 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.7 3.52 2 1 7 1 2 1 1 1 1 1 1 1 36.02 34.426 3 0.015769 41367 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 21.093 16.038 146960000 6295900 109130000 0 3581000 1953500 0 4427600 2957800 0 5581800 8122400 0 0 4906500 0 54910 645 49324 461370;461371;461372;461373;461374;461375;461376;461377;461378;461379 365016;365017;365018;365019 365018 4 VDAALHTMLLK Unmodified 1210.6744 0.67437911 2831 Q5VZE5 NAA35 N-alpha-acetyltransferase 35, NatC auxiliary subunit yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 2 1 65.443 64.238 2;3 0.0081784 87987 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.681 54.884 124120000 9595300 0 0 2407200 5460400 6690400 0 0 0 26453000 29839000 43677000 0 0 0 54911 2831 49325 461380;461381;461382;461383;461384;461385;461386;461387 365020;365021;365022;365023 365021 2 VDAAPGIPPAVESIQDSPLPK Unmodified 2100.1103 0.11028532 2583 Q15814 TBCC Tubulin-specific chaperone C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.8 2.76 2 2 21 4 2 2 2 1 2 2 2 2 2 2 2 85.293 84.734 2;3 1.2376E-23 104230 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 142.1 128.96 585070000 0 421200000 0 0 12387000 20475000 12164000 8375900 7937100 20652000 17889000 17091000 9998400 11567000 25336000 54912 2583 49326 461388;461389;461390;461391;461392;461393;461394;461395;461396;461397;461398;461399;461400;461401;461402;461403;461404;461405;461406;461407;461408;461409;461410;461411;461412 365024;365025;365026;365027;365028;365029;365030;365031;365032;365033;365034;365035;365036;365037;365038;365039;365040;365041;365042 365028 13 VDAFLGTWK Acetyl (Protein N-term) 1077.5495 0.54949617 809 P05413 FABP3 Fatty acid-binding protein, heart yes yes 1 0 0 By MS/MS 2 0 1 1 98.345 93.61 2 2.2646E-06 115822 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 155.1 127.58 38602000 0 38602000 0 0 0 0 0 0 0 0 0 0 0 0 0 54913 809 49327 461413 365043 365043 1 VDAIGLELVDGK Unmodified 1227.6711 0.67106787 1187 P25391 LAMA1 Laminin subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS 6.8 3.92 2 3 1 1 1 1 1 80.797 79.319 2 0.0013804 91897 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 68.355 53.095 69253000 0 50062000 2186100 0 3011000 4111700 0 0 0 9882100 0 0 0 0 0 54914 1187 49328 461414;461415;461416;461417;461418 365044;365045 365044 2 VDALLSAQPK Unmodified 1040.5866 0.58660996 4751 Q9NYU2 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 49.246 44.442 2 0.026414 57599 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.518 32.636 839160000 0 831700000 7458700 0 0 0 0 0 0 0 0 0 0 0 0 54915 4751 49329 461419;461420 365046 365046 1 VDALMDEINFMK 2 Oxidation (M) 1456.6578 0.65780235 74 CON__P13647;P13647 KRT5 Keratin, type II cytoskeletal 5 no no 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 70.633 70.706 2 3.2935E-20 81627 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 158.79 144.8 + 4893600000 0 0 0 1174000000 302130000 410670000 281780000 487660000 231730000 431230000 368760000 330660000 502150000 209250000 163630000 54916 74 49330 461421;461422;461423;461424;461425;461426;461427;461428;461429;461430;461431;461432;461433;461434;461435;461436;461437;461438;461439;461440;461441;461442;461443;461444 365047;365048;365049;365050;365051;365052;365053;365054;365055;365056;365057;365058;365059;365060;365061;365062;365063;365064;365065;365066;365067;365068;365069;365070;365071;365072;365073;365074;365075 365059 104;105 27 VDALMDEINFMK Oxidation (M) 1440.6629 0.66288773 74 CON__P13647;P13647 KRT5 Keratin, type II cytoskeletal 5 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 35 3 3 3 2 3 3 3 3 3 3 3 3 80.385 80.442 2 9.0909E-35 93132 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 177.06 152.29 + 2222900000 0 0 0 292240000 97664000 160330000 58369000 355490000 100080000 272580000 194100000 213990000 208800000 109760000 159530000 54917 74 49330 461445;461446;461447;461448;461449;461450;461451;461452;461453;461454;461455;461456;461457;461458;461459;461460;461461;461462;461463;461464;461465;461466;461467;461468;461469;461470;461471;461472;461473;461474;461475;461476;461477;461478;461479 365076;365077;365078;365079;365080;365081;365082;365083;365084;365085;365086;365087;365088;365089;365090;365091;365092;365093;365094;365095;365096;365097;365098;365099;365100;365101;365102;365103;365104;365105;365106;365107;365108;365109;365110;365111;365112 365096 104;105 27 VDALMDEINFMK Unmodified 1424.668 0.6679731 74 CON__P13647;P13647 KRT5 Keratin, type II cytoskeletal 5 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 88.218 87.19 2 1.8816E-12 108587 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 147.95 137.42 + 347100000 6699700 140910000 0 14067000 7923500 11537000 3421000 41857000 7276200 23696000 17163000 16852000 11257000 10137000 34313000 54918 74 49330 461480;461481;461482;461483;461484;461485;461486;461487;461488;461489;461490;461491;461492;461493;461494 365113;365114;365115;365116;365117;365118;365119;365120;365121;365122;365123;365124;365125;365126;365127;365128 365117 15 VDALNDEINFLR Unmodified 1417.7201 0.72014333 69;88 CON__P08729;CON__Q3KNV1;P08729 KRT7 Keratin, type II cytoskeletal 7 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 83.582 83.645 2 2.0695E-135 97183 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 223.08 170.5 + 615430000 0 0 0 9609800 24643000 41792000 38648000 62295000 50123000 67792000 60951000 73726000 42878000 50503000 92466000 54919 69;88 49331 461495;461496;461497;461498;461499;461500;461501;461502;461503;461504;461505;461506 365129;365130;365131;365132;365133;365134;365135;365136;365137;365138;365139;365140;365141;365142;365143 365139 14 VDAQFGGIDQR Unmodified 1204.5836 0.58364985 1740 P54577 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 46.226 46.412 2 1.9596E-05 51021 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 127.76 98.678 167070000 0 0 0 0 6486300 19391000 8300100 0 5317300 14077000 24383000 0 15158000 15827000 58128000 54920 1740 49332 461507;461508;461509;461510;461511;461512;461513;461514;461515 365144;365145;365146;365147;365148;365149;365150;365151;365152 365147 7 VDAQFGGIDQRK Unmodified 1332.6786 0.67861287 1740 P54577 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.45 3.89 4 1 6 1 2 2 1 1 1 1 1 1 39.292 37.137 2;3 0.0011986 46326 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 96.745 82.781 1741900000 95230000 1170100000 306280000 10845000 9265700 0 16701000 13072000 13694000 0 0 0 0 0 106720000 54921 1740 49333 461516;461517;461518;461519;461520;461521;461522;461523;461524;461525;461526 365153;365154;365155;365156;365157;365158;365159;365160;365161;365162 365158 8 VDASACGMER Unmodified 1094.4485 0.44847828 678 O95671 ASMTL N-acetylserotonin O-methyltransferase-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 19.881 20.29 2 0.003743 20632 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 75.378 59.084 18811000 0 0 0 0 0 2834800 0 0 0 0 3312200 3260300 0 2681700 6722400 54922 678 49334 461527;461528;461529;461530;461531 365163;365164;365165;365166;365167 365167 5 VDASACGMER Oxidation (M) 1110.4434 0.4433929 678 O95671 ASMTL N-acetylserotonin O-methyltransferase-like protein yes yes 0 1 0 By MS/MS 10 0 1 1 7.8828 8.2417 2 0.036159 6256 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 61.161 48.202 1892000 0 0 0 0 0 0 0 0 0 0 1892000 0 0 0 0 54923 678 49334 461532 365168 365168 0 VDATADYICK Unmodified 1154.5278 0.52777445 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39.677 38.982 2 0.00091965 43897 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 130.75 85.666 5321000000 23910000 563380000 0 124730000 274380000 262670000 871340000 1017200000 913950000 302420000 375040000 473890000 14110000 28449000 75581000 54924 1714 49335 461533;461534;461535;461536;461537;461538;461539;461540;461541;461542;461543;461544;461545;461546 365169;365170;365171;365172;365173;365174;365175;365176;365177;365178;365179;365180;365181;365182;365183;365184;365185;365186;365187 365170 19 VDATAETDLAK Unmodified 1132.5612 0.56118307 982 P13667 PDIA4 Protein disulfide-isomerase A4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.12 3.92 2 3 1 11 3 2 1 1 1 1 1 1 1 1 1 1 1 1 50.85 49.499 2 1.5706E-16 36575 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 166.33 122.52 709450000 140580000 127310000 3993000 0 0 0 0 75252000 0 0 167440000 0 0 0 194880000 54925 982 49336 461547;461548;461549;461550;461551;461552;461553;461554;461555;461556;461557;461558;461559;461560;461561;461562;461563 365188;365189;365190;365191;365192;365193;365194;365195;365196;365197;365198;365199;365200;365201;365202;365203;365204;365205 365204 17 VDATDASYPSVNTCVHYLK Unmodified 2138.9943 0.99426928 5004 Q9ULT8 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 6.25 3.77 1 1 2 2 1 1 68.309 65.742 3 2.6451E-06 83946 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.548 66.365 104520000 0 84897000 0 0 0 10099000 0 0 0 9524900 0 0 0 0 0 54926 5004 49337 461564;461565;461566;461567 365206;365207;365208;365209 365208 4 VDATEESDLAQQYGVR Unmodified 1779.8275 0.82752153 838 P07237 P4HB Protein disulfide-isomerase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.89 2.72 3 1 24 1 3 2 2 2 2 2 2 2 2 2 2 2 2 63.752 63.221 2;3 0 71865 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 273.8 244.84 1422300000 0 226160000 0 50126000 38801000 37225000 50820000 47349000 23889000 49770000 174470000 142570000 51861000 159460000 369790000 54927 838 49338 461568;461569;461570;461571;461572;461573;461574;461575;461576;461577;461578;461579;461580;461581;461582;461583;461584;461585;461586;461587;461588;461589;461590;461591;461592;461593;461594;461595 365210;365211;365212;365213;365214;365215;365216;365217;365218;365219;365220;365221;365222;365223;365224;365225;365226;365227;365228;365229;365230;365231;365232;365233;365234;365235 365217 24 VDATEESDLAQQYGVRGYPTIK Unmodified 2439.1918 0.19178311 838 P07237 P4HB Protein disulfide-isomerase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 77.941 73.182 3 1.0594E-153 91802 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 217.36 210.03 2190400000 135470000 1937400000 117520000 0 0 0 0 0 0 0 0 0 0 0 0 54928 838 49339 461596;461597;461598;461599 365236;365237;365238;365239;365240 365236 5 VDATRPEATTEVGPQIGVK Unmodified 1967.0324 0.032369346 3999 Q96T58 SPEN Msx2-interacting protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 54.301 54.116 3 9.1342E-09 61212 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 83.404 71.199 111080000 0 3664300 0 0 0 9262700 11816000 8026500 7436000 9021700 9149100 16815000 12758000 11696000 11437000 54929 3999 49340 461600;461601;461602;461603;461604;461605;461606;461607;461608;461609;461610;461611 365241;365242;365243;365244;365245;365246;365247;365248;365249;365250;365251;365252;365253;365254;365255 365243 15 VDAVDLREYVDICWVDAEEK Unmodified 2423.1315 0.13149104 3086 Q7Z3T8 ZFYVE16 Zinc finger FYVE domain-containing protein 16 yes yes 0 0 1 By MS/MS 2 0 1 1 95.821 87.69 3 0.017955 113427 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 35.538 27.826 8409800 8409800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54930 3086 49341 461612 365256 365256 0 VDAVHADVYR Unmodified 1143.5673 0.5672715 2467 Q15003 NCAPH Condensin complex subunit 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 30.665 30.964 3 0.0076055 33154 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 45.879 33.263 169670000 0 0 0 0 0 27265000 19930000 9408700 9379000 20056000 17631000 18281000 0 15652000 32062000 54931 2467 49342 461613;461614;461615;461616;461617;461618;461619;461620;461621 365257;365258 365258 2 VDAYIQEHLLQISEEEEFLK Unmodified 2432.2111 0.21112157 5300 Q9Y6Y0 IVNS1ABP Influenza virus NS1A-binding protein yes yes 0 0 0 By MS/MS 2 0 1 1 95.936 87.805 3 9.7527E-38 113497 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 123.53 116.2 17072000 17072000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54932 5300 49343 461622 365259 365259 1 VDCANGIGALK Unmodified 1116.5597 0.55974328 653 O95394 PGM3 Phosphoacetylglucosamine mutase yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 45.396 40.317 2 0.0032636 52127 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.168 46.008 163520000 0 163520000 0 0 0 0 0 0 0 0 0 0 0 0 0 54933 653 49344 461623;461624 365260;365261 365260 2 VDCDQHSDIAQR Unmodified 1442.6208 0.62083999 4123 Q9BS26 ERP44 Endoplasmic reticulum resident protein 44 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 13.249 13.404 2;3 0.00033248 12107 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.324 70.019 206960000 0 0 0 9230000 13771000 13236000 12419000 12303000 8320200 13703000 16718000 27683000 20581000 21100000 37893000 54934 4123 49345 461625;461626;461627;461628;461629;461630;461631;461632;461633;461634;461635;461636;461637;461638;461639;461640;461641;461642;461643;461644;461645;461646;461647;461648 365262;365263;365264;365265;365266;365267 365263 5 VDCEANLTPNVGGYFVDK Unmodified 1996.92 0.9200417 3661 Q92791 LEPREL4 Synaptonemal complex protein SC65 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 81.973 77.971 2 6.8085E-06 96778 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.2 102.78 24689000 0 24689000 0 0 0 0 0 0 0 0 0 0 0 0 0 54935 3661 49346 461649;461650 365268 365268 1 VDCLSSER Unmodified 964.42839 0.42839476 2529 Q15398 DLGAP5 Disks large-associated protein 5 yes yes 0 0 0 By matching By matching By matching By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 15.337 15.535 2 0.048162 14363 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.574 19.356 15416000 0 0 0 0 996480 0 1551000 0 0 1588800 3258300 0 0 3446300 4575100 54936 2529 49347 461651;461652;461653;461654;461655;461656 365269 365269 1 VDCTAHSDVCSAQGVR Unmodified 1760.757 0.7570159 3402 Q8NBS9 TXNDC5 Thioredoxin domain-containing protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.55 1.79 1 1 31 2 2 3 3 2 2 3 4 3 2 2 3 2 48.303 48.162 2;3 6.1962E-05 23187 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.813 52.179 1329000000 0 33899000 0 70034000 98907000 210240000 49122000 53588000 114020000 191390000 107350000 101190000 98323000 125290000 75663000 54937 3402 49348 461657;461658;461659;461660;461661;461662;461663;461664;461665;461666;461667;461668;461669;461670;461671;461672;461673;461674;461675;461676;461677;461678;461679;461680;461681;461682;461683;461684;461685;461686;461687;461688;461689 365270;365271;365272;365273;365274;365275;365276;365277;365278;365279;365280;365281;365282;365283;365284;365285;365286;365287;365288;365289 365277 19 VDCTAHSDVCSAQGVRGYPTLK Unmodified 2420.1213 0.12127748 3402 Q8NBS9 TXNDC5 Thioredoxin domain-containing protein 5 yes yes 0 0 1 By MS/MS By MS/MS 2 0 4 2 2 53.908 47.873 3;4 2.5529E-20 65420 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 105.06 97.167 536290000 323030000 0 213270000 0 0 0 0 0 0 0 0 0 0 0 0 54938 3402 49349 461690;461691;461692;461693 365290;365291;365292;365293;365294 365291 4 VDCTANTNTCNK Unmodified 1396.5711 0.57111261 1270 P30101 PDIA3 Protein disulfide-isomerase A3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 1.71 0.7 3 3 1 3 3 1 50.05 49.919 2;3 8.2661E-109 7797 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 236.33 205.26 411470000 237170000 169070000 5226900 0 0 0 0 0 0 0 0 0 0 0 0 54939 1270 49350 461694;461695;461696;461697;461698;461699;461700 365295;365296;365297;365298;365299;365300;365301 365299 5 VDCTQHYELCSGNQVR Unmodified 1964.8469 0.84689354 3402 Q8NBS9 TXNDC5 Thioredoxin domain-containing protein 5 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 37.475 37.991 3 0.01063 41199 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 24.043 17.626 14633000 0 0 0 0 0 0 0 0 0 0 0 0 0 5269000 9363900 54940 3402 49351 461701;461702 365302 365302 1 VDDDSLGEFPVTNSR Unmodified 1649.7533 0.75329395 3660 Q92785 DPF2 Zinc finger protein ubi-d4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.142 67.222 2 8.9188E-23 76396 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 119.21 102.96 126960000 0 0 0 9659800 7458000 10549000 8827000 6167100 7093400 11640000 13497000 14089000 11534000 8842800 17607000 54941 3660 49352 461703;461704;461705;461706;461707;461708;461709;461710;461711;461712;461713;461714 365303;365304;365305;365306;365307;365308;365309;365310;365311;365312;365313;365314;365315;365316;365317;365318;365319;365320 365308 18 VDDEPMDVDK Unmodified 1161.486 0.48596922 2236 Q13123 IK Protein Red yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.069 31.258 2 0.0019022 33754 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 100.02 90.601 136570000 0 0 0 7334500 5544900 13245000 7690400 8209200 9502800 14347000 12267000 15031000 10226000 10866000 22300000 54942 2236 49353 461715;461716;461717;461718;461719;461720;461721;461722;461723;461724;461725;461726 365321;365322;365323;365324;365325;365326;365327;365328;365329;365330;365331 365329 11 VDDEPMDVDK Oxidation (M) 1177.4809 0.48088384 2236 Q13123 IK Protein Red yes yes 0 1 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 2 1 1 1 1 2 1 1 1 2 1 1 17.982 18.152 2 0.012105 17893 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 48.423 40.944 44647000 0 0 0 4180200 1923900 4412900 2672400 1851000 5383400 4515100 2535000 3829300 7842800 2222200 3278500 54943 2236 49353 461727;461728;461729;461730;461731;461732;461733;461734;461735;461736;461737;461738;461739;461740;461741 365332;365333;365334;365335;365336 365332 3635 5 VDDESMQR Unmodified 978.40766 0.40765932 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 9.8084 9.9104 2 0.036499 8422 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 51.854 33.124 11950000 0 0 0 1839400 1719300 0 0 0 991830 0 0 3565900 0 0 3833500 54944 2930 49354 461742;461743;461744;461745;461746 365337 365337 1 VDDFLANEAK Unmodified 1120.5401 0.5400537 1680 P52209 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 6.67 3.74 2 2 5 1 3 1 1 1 1 1 51.706 50.162 2 6.1996E-06 64201 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.36 120.79 4857000000 0 4644400000 0 0 0 0 23511000 0 0 0 40436000 0 0 43661000 105010000 54945 1680 49355 461747;461748;461749;461750;461751;461752;461753;461754;461755 365338;365339;365340;365341;365342;365343;365344;365345;365346;365347 365341 10 VDDHLMGK Unmodified 913.43275 0.43275186 630 O95232 LUC7L3 Luc7-like protein 3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 19.743 20.055 2 0.015851 20220 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 68.214 45.592 59435000 0 0 0 0 0 6719100 0 6140500 0 8725700 0 12646000 8169900 7093400 9940400 54946 630 49356 461756;461757;461758;461759;461760;461761;461762 365348;365349;365350 365350 3 VDDKPSSPGDSSK Unmodified 1317.6048 0.6048388 4507 Q9HC52 CBX8 Chromobox protein homolog 8 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 6.8199 6.9326 3 0.0075704 5160 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 34.611 20.802 63392000 0 0 0 4119400 4865500 3549000 7531300 4623900 4851400 4394500 9632300 5584200 5167500 0 9073200 54947 4507 49357 461763;461764;461765;461766;461767;461768;461769;461770;461771;461772;461773 365351;365352;365353 365353 3 VDDLDIHQVSTAGQPSK Unmodified 1808.8905 0.89045614 2867 Q6BDS2 UHRF1BP1 UHRF1-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 48.832 48.99 3 3.9589E-29 55338 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 100.77 83.891 295760000 0 0 0 14417000 15869000 28902000 17682000 29076000 0 31800000 26912000 48427000 31736000 23432000 27506000 54948 2867 49358 461774;461775;461776;461777;461778;461779;461780;461781;461782;461783;461784 365354;365355;365356;365357;365358;365359;365360 365354 7 VDDLLESYMGIRDTELAATMVELGK Unmodified 2768.3612 0.36123298 226 O14908 GIPC1 PDZ domain-containing protein GIPC1 yes yes 0 0 1 By MS/MS 2 0 1 1 99.487 91.357 3 1.85E-21 117765 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.659 76.242 15263000 15263000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54949 226 49359 461785 365361;365362 365361 2 VDDLLIIEEK Unmodified 1185.6493 0.6492698 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 78.328 76.821 2 0.0058672 92004 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 98.044 66.815 422830000 59584000 102650000 25015000 19340000 0 0 22825000 24326000 0 39413000 30999000 0 21560000 27195000 49930000 54950 2392 49360 461786;461787;461788;461789;461790;461791;461792;461793;461794;461795;461796;461797;461798;461799 365363;365364;365365;365366;365367;365368;365369;365370;365371;365372 365367 8 VDDMLAAGLLEELR Unmodified 1543.7916 0.79159371 4378 Q9H3H1 TRIT1 tRNA dimethylallyltransferase, mitochondrial yes yes 0 0 0 By MS/MS 10 0 1 1 45.258 45.421 4 0.041655 50973 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 18.413 6.0306 4248400 0 0 0 0 0 0 0 0 0 4248400 0 0 0 0 0 54951 4378 49361 461800 365373 365373 1 VDDSSEDK Unmodified 893.36142 0.36142063 1578 P49588 AARS Alanine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS 1 0 1 1 106.47 111.74 2 0.013731 92390 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 97.093 79.327 126850000 126850000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54952 1578 49362 461801 365374 365374 1 VDDSSEDKTEFTVK Unmodified 1598.7312 0.73116153 1578 P49588 AARS Alanine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.38 3.91 5 1 7 2 3 1 1 1 1 1 1 1 1 35.903 33.636 2;3 1.6599E-87 43503 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 216.83 191.39 575410000 42039000 425370000 3114900 8123100 7046600 0 0 0 0 0 20347000 19218000 8221100 14869000 27064000 54953 1578 49363 461802;461803;461804;461805;461806;461807;461808;461809;461810;461811;461812;461813;461814 365375;365376;365377;365378;365379;365380;365381;365382;365383;365384 365376 10 VDDSSGSIGRR Unmodified 1147.5582 0.55816338 1440 P41250 GARS Glycine--tRNA ligase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 2 1 1 1 1 9.2987 9.45 2;3 0.0001067 8563 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 74.944 45.009 288750000 0 0 0 10482000 9246800 16145000 19298000 10830000 8917000 15806000 68821000 31365000 19353000 26841000 51645000 54954 1440 49364 461815;461816;461817;461818;461819;461820;461821;461822;461823;461824;461825;461826;461827 365385;365386;365387;365388;365389;365390;365391;365392;365393;365394;365395;365396 365385 7 VDDVLASLQVSSHK Unmodified 1496.7835 0.78347187 3609 Q92503 SEC14L1 SEC14-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 2 1 1 1 1 1 1 1 1 1 68.763 68.843 2;3 0.00024081 79026 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 73.887 68.71 170930000 0 0 0 4266400 7061700 13784000 10598000 14925000 8283600 14202000 20350000 23846000 12097000 15249000 26270000 54955 3609 49365 461828;461829;461830;461831;461832;461833;461834;461835;461836;461837;461838;461839;461840 365397;365398;365399;365400;365401;365402;365403;365404;365405 365399 9 VDDYEHAAK Unmodified 1046.4669 0.46688876 296 O43148 RNMT mRNA cap guanine-N7 methyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 10.964 7.8368 2 0.0076577 10649 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.136 52.141 99869000 3152800 95758000 958840 0 0 0 0 0 0 0 0 0 0 0 0 54956 296 49366 461841;461842;461843 365406;365407 365406 2 VDDYSQEWAAQTEK Unmodified 1668.7267 0.72674485 671 O95602 POLR1A DNA-directed RNA polymerase I subunit RPA1 yes yes 0 0 0 By MS/MS 2 0 1 1 55.566 49.751 2 3.7999E-14 64315 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145.28 135.04 10889000 0 10889000 0 0 0 0 0 0 0 0 0 0 0 0 0 54957 671 49367 461844 365408 365408 1 VDEAIALFQK Unmodified 1132.6128 0.61282471 1210 P26640 VARS Valine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 75.245 74.105 2 3.0183E-05 92723 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.31 97.432 2317500000 64257000 1697000000 66568000 25221000 20759000 48811000 31732000 31023000 29274000 47795000 50694000 58819000 27032000 38583000 79950000 54958 1210 49368 461845;461846;461847;461848;461849;461850;461851;461852;461853;461854;461855;461856;461857;461858;461859;461860 365409;365410;365411;365412;365413;365414;365415;365416;365417;365418;365419;365420;365421;365422;365423;365424;365425;365426 365413 17 VDEAVAVLQAHHAK Unmodified 1486.7892 0.78922595 2268 Q13310 PABPC4 Polyadenylate-binding protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.8 3.54 1 4 2 18 3 2 2 2 1 2 1 2 1 2 1 2 1 2 1 46.319 45.363 2;3 5.3611E-28 60640 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 148.56 123.68 1012700000 47213000 96953000 156280000 28464000 32289000 62956000 48023000 46257000 47286000 67948000 71648000 77352000 66733000 64166000 99108000 54959 2268 49369 461861;461862;461863;461864;461865;461866;461867;461868;461869;461870;461871;461872;461873;461874;461875;461876;461877;461878;461879;461880;461881;461882;461883;461884;461885 365427;365428;365429;365430;365431;365432;365433;365434;365435;365436;365437;365438;365439;365440;365441;365442;365443;365444;365445;365446;365447;365448;365449;365450;365451;365452;365453;365454;365455 365441 25 VDEAVAVLQAHQAK Unmodified 1477.7889 0.7888916 958 P11940;Q9H361 PABPC1;PABPC3 Polyadenylate-binding protein 1;Polyadenylate-binding protein 3 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.5 3.72 1 8 1 22 4 4 2 2 2 2 2 2 1 2 2 1 2 2 2 53.626 52.607 2;3 2.965E-19 55727 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 157.77 140.74 6791300000 165790000 2689400000 803750000 166090000 207340000 320740000 246060000 229580000 35252000 342670000 362850000 72405000 337760000 320880000 490740000 54960 958 49370 461886;461887;461888;461889;461890;461891;461892;461893;461894;461895;461896;461897;461898;461899;461900;461901;461902;461903;461904;461905;461906;461907;461908;461909;461910;461911;461912;461913;461914;461915;461916;461917 365456;365457;365458;365459;365460;365461;365462;365463;365464;365465;365466;365467;365468;365469;365470;365471;365472;365473;365474;365475;365476;365477;365478 365462 23 VDEDEEALK Unmodified 1046.4768 0.47678474 4241 Q9BY43 CHMP4A Charged multivesicular body protein 4a yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 23.893 19.392 2 0.040167 26021 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.853 66.959 34542000 16635000 17906000 0 0 0 0 0 0 0 0 0 0 0 0 0 54961 4241 49371 461918;461919 365479 365479 0 VDEDEIQK Unmodified 974.45566 0.45565537 2546 Q15544 TAF11 Transcription initiation factor TFIID subunit 11 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.439 16.619 2 0.020537 15784 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 62.717 34.611 26404000 0 0 0 1494000 1180200 1983200 1422600 1306500 1796800 2092900 3170800 3971400 1992700 1999300 3993600 54962 2546 49372 461920;461921;461922;461923;461924;461925;461926;461927;461928;461929;461930;461931 365480;365481 365480 2 VDEDSAEDTQSNDGK Unmodified 1608.6387 0.6387177 4365 Q9H2G2 SLK STE20-like serine/threonine-protein kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 8.38 3.39 2 1 13 2 1 1 1 1 1 1 1 1 1 1 1 1 2 22.192 22.464 2 4.6397E-215 6333 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 234.17 233.48 97849000 19393000 23288000 0 4594100 4704500 5475800 5044400 0 1916400 3581000 12325000 7626600 3767600 4034100 2098100 54963 4365 49373 461932;461933;461934;461935;461936;461937;461938;461939;461940;461941;461942;461943;461944;461945;461946;461947 365482;365483;365484;365485;365486;365487;365488;365489;365490;365491;365492;365493 365489 12 VDEETQEVLENLK Unmodified 1544.757 0.75698235 4110 Q9BRK5 SDF4 45 kDa calcium-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.33 2 2 11 2 2 1 1 1 1 1 1 1 1 1 1 1 73.926 72.652 2 5.984E-89 90031 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 223.96 201.87 319570000 8592500 208540000 0 0 4667500 6838700 5771700 7136500 6447800 10692000 15043000 13182000 10306000 7277700 15072000 54964 4110 49374 461948;461949;461950;461951;461952;461953;461954;461955;461956;461957;461958;461959;461960;461961;461962 365494;365495;365496;365497;365498;365499;365500;365501;365502;365503;365504;365505 365498 11 VDEFVTHNLSFDEINK Unmodified 1905.9109 0.91085723 955 P11766 ADH5 Alcohol dehydrogenase class-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.35 3.89 9 1 7 3 4 3 2 2 1 2 78.758 76.411 2;3 2.598E-58 95363 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 192.14 178.55 1015400000 165910000 416070000 228460000 0 0 0 0 0 0 0 25500000 31636000 0 14493000 133370000 54965 955 49375 461963;461964;461965;461966;461967;461968;461969;461970;461971;461972;461973;461974;461975;461976;461977;461978;461979 365506;365507;365508;365509;365510;365511;365512;365513;365514;365515;365516;365517;365518;365519;365520;365521;365522 365508 17 VDEGAGDSAAVASGGAQTLALAGSPAPSGHPK Unmodified 2845.3842 0.38422834 4782 Q9NZT2 OGFR Opioid growth factor receptor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 67.604 66.862 3 3.3175E-27 84347 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.446 75.913 256470000 0 117240000 0 6208600 7599300 12515000 8877500 9753600 8465800 8167500 0 20861000 14781000 14251000 27747000 54966 4782 49376 461980;461981;461982;461983;461984;461985;461986;461987;461988;461989;461990;461991;461992 365523;365524;365525;365526;365527;365528;365529;365530;365531;365532;365533;365534;365535;365536;365537 365527 15 VDEGGWNTVQGAK Unmodified 1359.6419 0.64189301 329 O43432 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 0 0 0 By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 40.641 40.89 2 2.5907E-09 45732 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 114.83 101.46 64326000 0 0 0 0 5316300 5335400 5080400 0 4775400 7764400 7531700 5996000 7716400 6771000 8039400 54967 329 49377 461993;461994;461995;461996;461997;461998;461999;462000;462001;462002 365538;365539;365540;365541;365542;365543;365544 365538 7 VDEGVDEFFTK Unmodified 1284.5874 0.58739782 2833 Q5VZK9 LRRC16A Leucine-rich repeat-containing protein 16A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 72.472 72.529 2 1.469E-05 83539 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 135.55 40.699 122590000 0 0 0 9726400 10029000 19748000 9658100 9189600 5545700 16897000 11378000 13780000 0 0 16642000 54968 2833 49378 462003;462004;462005;462006;462007;462008;462009;462010;462011;462012;462013 365545;365546;365547;365548;365549;365550;365551;365552;365553;365554;365555;365556 365546 12 VDEHLAK Unmodified 810.42357 0.42356738 968 P12429 ANXA3 Annexin A3 yes yes 0 0 0 By MS/MS By MS/MS 2.67 0.471 1 2 1 2 11.111 7.5954 2 0.029967 9618 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 94.006 49.475 191350000 392560 190950000 0 0 0 0 0 0 0 0 0 0 0 0 0 54969 968 49379 462014;462015;462016 365557;365558 365558 1 VDELEAALR Unmodified 1014.5346 0.53457439 100 CON__Q7RTT2;CON__Q8N1N4-2;Q8N1N4 KRT78 Keratin, type II cytoskeletal 78 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 56.911 56.853 2 0.014237 65325 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 58.596 29.237 + 250920000 0 0 0 104160000 22926000 0 22427000 56989000 10748000 22503000 0 0 0 11167000 0 54970 100 49380 462017;462018;462019;462020;462021;462022;462023 365559;365560;365561;365562;365563 365561 5 VDELMQDIADQQELAEEISTAISK Unmodified 2675.2848 0.2847568 4390 Q9H444 CHMP4B Charged multivesicular body protein 4b yes yes 0 0 0 By MS/MS 2 0 1 1 99.243 96.817 3 0.0013155 117051 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 36.9 34.138 1161300 0 0 1161300 0 0 0 0 0 0 0 0 0 0 0 0 54971 4390 49381 462024 365564 365564 1 VDELTCEK Unmodified 992.44846 0.4484615 391 O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 18.704 18.15 2 0.0081342 18289 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 87.251 45.359 64368000 6115800 17018000 0 3388100 2925300 0 2852700 3023100 3258700 4528300 5724900 6142400 4060600 5330800 0 54972 391 49382 462025;462026;462027;462028;462029;462030;462031;462032;462033;462034;462035;462036 365565;365566;365567;365568 365566 3 VDELTTDLEILK Unmodified 1387.7446 0.74462675 2391 Q14203 DCTN1 Dynactin subunit 1 yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 32.425 27.711 3 0.037118 39175 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 24.254 1.8893 9989500 8859200 0 1130200 0 0 0 0 0 0 0 0 0 0 0 0 54973 2391 49383 462037;462038 365569 365569 1 VDENFDCVEADDVEGK Unmodified 1839.7469 0.74688795 228 O14929 HAT1 Histone acetyltransferase type B catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.8 2 2 2 12 3 3 1 1 1 1 1 1 1 1 1 1 1 1 63.609 62.688 2 1.8372E-167 101823 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 245.03 234.93 437480000 118170000 98717000 0 7641000 7764700 23093000 11192000 13439000 8495200 21886000 23474000 19141000 18775000 17073000 48619000 54974 228 49384 462039;462040;462041;462042;462043;462044;462045;462046;462047;462048;462049;462050;462051;462052;462053;462054;462055;462056 365570;365571;365572;365573;365574;365575;365576;365577;365578;365579;365580;365581;365582;365583;365584;365585;365586;365587;365588 365582 19 VDENGPELLPR Unmodified 1237.6303 0.63026569 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 56.403 56.556 2 6.8351E-05 64377 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 125.71 99.608 155620000 0 0 0 0 12740000 16134000 14169000 12816000 9553700 15282000 22203000 24667000 14537000 13522000 0 54975 3641 49385 462057;462058;462059;462060;462061;462062;462063;462064;462065;462066 365589;365590;365591;365592;365593;365594;365595;365596;365597;365598;365599 365595 11 VDENHSEFTLYESR Unmodified 1724.7642 0.76419299 183 O14497 ARID1A AT-rich interactive domain-containing protein 1A yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 53.221 53.148 3 0.0039835 60320 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 36.392 32.29 27684000 0 0 0 3197300 1702400 6652500 3356100 3201500 0 5027100 0 0 0 4547000 0 54976 183 49386 462067;462068;462069;462070;462071;462072;462073 365600;365601;365602;365603 365602 4 VDESGPPAPSK Unmodified 1082.5244 0.52440364 2647 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 16.515 16.663 2 0.00034474 16548 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 88.496 72.293 70087000 0 0 0 3338600 1752700 10233000 4299800 0 4687800 10087000 7716300 12039000 7924300 8008800 0 54977 2647 49387 462074;462075;462076;462077;462078;462079;462080;462081;462082;462083 365604;365605;365606;365607;365608;365609;365610;365611;365612;365613;365614;365615;365616 365606 13 VDESGPPAPSKPR Unmodified 1335.6783 0.67827852 2647 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.978 19.174 3 0.0043426 19401 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 40.83 32.525 137550000 0 0 0 9729200 10847000 8167800 14336000 9801400 6446300 14769000 12097000 17514000 12159000 6787500 14896000 54978 2647 49388 462084;462085;462086;462087;462088;462089;462090;462091;462092;462093;462094;462095 365617;365618;365619;365620;365621;365622;365623;365624;365625;365626 365622 9 VDEVPDGAVKPPTNK Unmodified 1564.8097 0.80968662 505 O75475 PSIP1 PC4 and SFRS1-interacting protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.802 39.982 3 0.00011795 44447 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 62.711 48.358 271870000 0 0 0 16271000 11431000 17735000 15494000 13894000 13867000 21372000 35014000 38489000 21981000 16449000 49878000 54979 505 49389 462096;462097;462098;462099;462100;462101;462102;462103;462104;462105;462106;462107 365627;365628;365629;365630;365631;365632;365633;365634;365635;365636;365637 365628 1 VDFDSAEDTR Unmodified 1153.4887 0.48874641 2830 Q5VZ89 DENND4C DENN domain-containing protein 4C yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 33.867 34.243 2 0.0082907 37613 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 60.398 54.739 28135000 0 0 0 0 0 5496600 0 0 0 3033300 0 4762200 7690600 2907800 4244400 54980 2830 49390 462108;462109;462110;462111;462112;462113 365638;365639;365640;365641;365642 365642 5 VDFDSAEDTRLIELDDSQK Unmodified 2195.023 0.022986451 2830 Q5VZ89 DENND4C DENN domain-containing protein 4C yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 80.317 74.566 3 0.00033212 95872 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.989 49.599 15721000 11262000 4458900 0 0 0 0 0 0 0 0 0 0 0 0 0 54981 2830 49391 462114;462115 365643;365644 365644 2 VDFIEEK Unmodified 878.43855 0.43854874 4744 Q9NYK5 MRPL39 39S ribosomal protein L39, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 47.018 41.571 2 0.047355 54065 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.741 20.277 11257000 0 11257000 0 0 0 0 0 0 0 0 0 0 0 0 0 54982 4744 49392 462116 365645 365645 1 VDFNVPMK Unmodified 948.47389 0.47388839 733;837 P00558;P07205 PGK1;PGK2 Phosphoglycerate kinase 1;Phosphoglycerate kinase 2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.06 62.16 2 0.0049933 70158 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 114.6 95.04 706210000 0 0 0 8684300 6030200 8013500 7222000 10264000 4502400 9013100 130330000 78284000 8867800 71829000 363160000 54983 733;837 49393 462117;462118;462119;462120;462121;462122;462123;462124;462125;462126;462127;462128 365646;365647;365648;365649;365650;365651;365652;365653 365647 8 VDFNVPMK Oxidation (M) 964.4688 0.46880301 733;837 P00558;P07205 PGK1;PGK2 Phosphoglycerate kinase 1;Phosphoglycerate kinase 2 no no 0 1 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 2 1 2 1 2 1 2 2 1 2 2 1 47.269 47.415 2 0.0093843 51997 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 116.9 90.107 519040000 0 0 0 13810000 4270800 11408000 5931800 12473000 2983900 16159000 140860000 51689000 14354000 86480000 158620000 54984 733;837 49393 462129;462130;462131;462132;462133;462134;462135;462136;462137;462138;462139;462140;462141;462142;462143;462144;462145;462146;462147 365654;365655;365656;365657;365658;365659 365657 891 2 VDFPQDQLTALTGR Unmodified 1559.7944 0.79437091 1423 P40926 MDH2 Malate dehydrogenase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 82.501 81.972 2 0.00011227 94542 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.137 65.701 90692000 0 51950000 0 3092200 0 0 0 3872500 0 2496500 6217000 4449600 0 5251300 13363000 54985 1423 49394 462148;462149;462150;462151;462152;462153;462154;462155 365660;365661;365662;365663;365664 365661 5 VDFPQDQLTALTGRIQEAGTEVVK Unmodified 2614.3602 0.36024543 1423 P40926 MDH2 Malate dehydrogenase, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 98.797 92.321 3 0.0062408 113986 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 30.585 23.391 26094000 6934800 19159000 0 0 0 0 0 0 0 0 0 0 0 0 0 54986 1423 49395 462156;462157 365665 365665 1 VDFPSSVR Unmodified 905.46068 0.46068117 1424 P40937 RFC5 Replication factor C subunit 5 yes yes 0 0 0 By MS/MS 10 0 1 1 46.629 46.683 2 0.043878 52629 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 49.097 10.305 16435000 0 0 0 0 0 16435000 0 0 0 0 0 0 0 0 0 54987 1424 49396 462158 365666 365666 1 VDFPTAIGMVVERDDGSTLMEIDGDK Oxidation (M) 2825.3099 0.30992569 716 O96019 ACTL6A Actin-like protein 6A yes yes 0 1 1 By MS/MS 2 0 2 2 96.019 87.889 3 5.0886E-05 113752 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.759 41.566 96758000 96758000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54988 716 49397 462159;462160 365667;365668 365668 860 2 VDFTEEEINNMK Oxidation (M) 1483.6501 0.65007443 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50.293 49.434 2 2.1601E-147 61367 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 250.62 234.65 2723100000 19471000 1200600000 0 122400000 103200000 163810000 151950000 74893000 107840000 131120000 119920000 173930000 125020000 90076000 138800000 54989 1518 49398 462161;462162;462163;462164;462165;462166;462167;462168;462169;462170;462171;462172;462173;462174 365669;365670;365671;365672;365673;365674;365675;365676;365677;365678;365679;365680;365681;365682;365683;365684;365685;365686;365687 365672 2412 19 VDFTEEEINNMK Unmodified 1467.6552 0.65515981 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 65.897 64.714 2 1.7726E-66 74397 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 229.48 220.3 2539200000 21343000 1347100000 0 89391000 70499000 134440000 76324000 80024000 56813000 104020000 122840000 96795000 75337000 93153000 171110000 54990 1518 49398 462175;462176;462177;462178;462179;462180;462181;462182;462183;462184;462185;462186;462187;462188;462189 365688;365689;365690;365691;365692;365693;365694;365695;365696;365697;365698;365699;365700;365701;365702;365703;365704 365689 16 VDFTEEEINNMKTELEK Oxidation (M) 2083.962 0.9619661 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 60.782 61.021 3 0.00030617 69567 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 53.193 44.185 29189000 0 0 0 0 0 4679300 5874900 0 0 0 5335000 9229600 0 4069900 0 54991 1518 49399 462190;462191;462192;462193;462194 365705 365705 2412 1 VDFVIPK Unmodified 816.47454 0.47454032 517 O75534 CSDE1 Cold shock domain-containing protein E1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67.645 67.01 2 0.033071 85721 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.086 52.348 1900200000 1999700 1582700000 0 11997000 13471000 20613000 17426000 17806000 14823000 24959000 38213000 38776000 19954000 31686000 65748000 54992 517 49400 462195;462196;462197;462198;462199;462200;462201;462202;462203;462204;462205;462206;462207;462208 365706;365707 365706 2 VDGAYVAVK Unmodified 920.49673 0.49673232 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.81 32.995 2 0.0032751 34850 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 93.195 67.745 218380000 0 0 0 19474000 11147000 16486000 12316000 13400000 8873500 20135000 25729000 27656000 22480000 14961000 25726000 54993 619 49401 462209;462210;462211;462212;462213;462214;462215;462216;462217;462218;462219;462220 365708;365709;365710;365711;365712;365713;365714;365715;365716 365712 9 VDGEIILHLYDK Unmodified 1413.7504 0.75038083 864 P08243 ASNS Asparagine synthetase [glutamine-hydrolyzing] yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.14 0.639 1 4 2 4 2 1 87.752 84.161 2;3 0.00011212 101161 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 103.08 89.964 147640000 100250000 44403000 2994500 0 0 0 0 0 0 0 0 0 0 0 0 54994 864 49402 462221;462222;462223;462224;462225;462226;462227 365717;365718;365719;365720;365721;365722;365723 365721 6 VDGIAWSPETR Unmodified 1229.6041 0.60405094 3447 Q8NFH4 NUP37 Nucleoporin Nup37 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 62.055 62.518 2 0.0098603 70729 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.108 36.841 9951500 0 0 0 0 0 0 0 0 0 0 3920500 0 0 0 6031000 54995 3447 49403 462228;462229 365724 365724 1 VDGIPNDSSDSEMEDK Oxidation (M) 1752.6996 0.6996034 4421 Q9H6S0 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 yes yes 0 1 0 By MS/MS 1 0 1 1 101.17 106.43 2 0.013894 86047 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 44.299 30.946 1644600 1644600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54996 4421 49404 462230 365725 365725 5873 1 VDGLLTCCSVLINK Unmodified 1590.8109 0.81094895 579 O94760 DDAH1 N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 82.157 78.155 2 1.4133E-14 97187 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.23 88.466 41507000 0 41507000 0 0 0 0 0 0 0 0 0 0 0 0 0 54997 579 49405 462231;462232 365726 365726 1 VDGLSDDHK Unmodified 984.45124 0.45123869 4498 Q9HB90;Q9NQL2 RRAGC;RRAGD Ras-related GTP-binding protein C;Ras-related GTP-binding protein D yes no 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 11.218 8.4527 2 0.0039447 11379 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.89 96.164 46291000 0 44650000 1640800 0 0 0 0 0 0 0 0 0 0 0 0 54998 4498 49406 462233;462234 365727;365728;365729 365727 3 VDGLVNFEK Unmodified 1019.5288 0.52876073 3520;5202 Q8TEU7;Q9Y4G8 RAPGEF6;RAPGEF2 Rap guanine nucleotide exchange factor 6;Rap guanine nucleotide exchange factor 2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 59.302 58.568 2 0.004021 66835 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 88.177 59.027 139460000 0 61568000 0 0 4943600 6947000 5687200 5979600 7417300 7020800 9802100 9875200 8669600 0 11551000 54999 3520;5202 49407 462235;462236;462237;462238;462239;462240;462241;462242;462243;462244;462245;462246;462247 365730;365731;365732;365733;365734;365735;365736;365737;365738;365739;365740 365732 10 VDGMNAPK Oxidation (M) 846.39055 0.39055269 1166 P23588 EIF4B Eukaryotic translation initiation factor 4B yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.88 2.98 1 7 1 1 1 1 1 1 1 1 18.781 19.495 2 0.0099634 4394 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 69.383 49.537 93715000 32289000 0 0 4044700 6029600 4812600 0 0 6689700 0 1325100 28688000 9836700 0 0 55000 1166 49408 462248;462249;462250;462251;462252;462253;462254;462255 365741;365742;365743;365744;365745 365744 1687 5 VDGMNAPK Unmodified 830.39564 0.39563807 1166 P23588 EIF4B Eukaryotic translation initiation factor 4B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 16.968 16.223 2 0.019825 16327 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 63.301 53.528 1507000000 32731000 1134700000 5693500 0 0 0 14822000 0 10159000 21225000 51743000 75194000 19349000 47921000 93489000 55001 1166 49408 462256;462257;462258;462259;462260;462261;462262;462263;462264;462265;462266 365746;365747;365748;365749;365750;365751;365752;365753 365750 4 VDGRVVEPK Unmodified 997.55564 0.55564418 891;1679 P09651;Q32P51;P51991 HNRNPA1;HNRNPA1L2;HNRNPA3 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2;Heterogeneous nuclear ribonucleoprotein A3 no no 0 0 1 By matching By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 19.584 15.916 2 0.0037937 20629 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 128.12 91.936 3978200000 376090000 3082500000 519600000 0 0 0 0 0 0 0 0 0 0 0 0 55002 891;1679 49409 462267;462268;462269;462270 365754;365755;365756;365757;365758;365759 365759 6 VDGSVNAYAINVSQK Unmodified 1563.7893 0.78928553 3562 Q8WVK2 SNRNP27 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 57.03 56.426 2 0.00075009 70612 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.59 90.475 70017000 0 17062000 0 3430000 5088200 0 6221400 0 7127000 7894000 7609600 11688000 0 3896800 0 55003 3562 49410 462271;462272;462273;462274;462275;462276;462277;462278;462279;462280 365760;365761;365762;365763;365764;365765;365766;365767;365768;365769 365763 10 VDGTCCYVTTYK Unmodified 1465.6218 0.62175119 3373 Q8N999 C12orf29 Uncharacterized protein C12orf29 yes yes 0 0 0 By MS/MS 2 0 1 1 46.51 41.063 2 0.00084028 53329 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.616 76.752 33316000 0 33316000 0 0 0 0 0 0 0 0 0 0 0 0 0 55004 3373 49411 462281 365770 365770 1 VDGTLLVGEDAPR Unmodified 1340.6936 0.69359423 4517 Q9HCK8 CHD8 Chromodomain-helicase-DNA-binding protein 8 yes yes 0 0 0 By MS/MS 10 0 1 1 60.876 61.456 2 8.3352E-05 69261 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.313 69.475 22325000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22325000 55005 4517 49412 462282 365771 365771 1 VDGWEQDLSVPEFPEGLEWLNTEEPISVYK Unmodified 3504.6613 0.66129763 3391 Q8NBF2 NHLRC2 NHL repeat-containing protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 100.55 92.424 3 0.013104 119083 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 19.985 15.365 8529100 8529100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55006 3391 49413 462283 365772 365772 1 VDHDTIIDATK Unmodified 1226.6143 0.61428128 245;5057 O15047;Q9UPS6 SETD1A;SETD1B Histone-lysine N-methyltransferase SETD1A;Histone-lysine N-methyltransferase SETD1B no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 32.624 32.821 3 0.0048682 35681 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 40.616 28.659 158470000 0 0 0 6753700 9467000 10086000 0 9917500 6535300 14711000 16886000 24801000 17345000 14382000 27589000 55007 245;5057 49414 462284;462285;462286;462287;462288;462289;462290;462291;462292;462293;462294 365773;365774;365775;365776;365777 365775 5 VDHFGFNTVK Unmodified 1162.5771 0.57710791 1468 P42785 PRCP Lysosomal Pro-X carboxypeptidase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 55.567 49.598 3 0.0087521 61419 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 48.981 38.056 137880000 79081000 13284000 45516000 0 0 0 0 0 0 0 0 0 0 0 0 55008 1468 49415 462295;462296;462297 365778;365779;365780;365781;365782 365781 4 VDHHVFISNR Unmodified 1222.6207 0.62070406 2456 Q14966 ZNF638 Zinc finger protein 638 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 24.404 24.512 3 0.028033 24542 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 38.783 28.031 59633000 0 0 0 0 5541600 10876000 8252400 0 10728000 6923100 7068400 0 0 10244000 0 55009 2456 49416 462298;462299;462300;462301;462302;462303;462304 365783 365783 1 VDHTGEYGNLVTIQSFK Unmodified 1906.9425 0.94249171 2269 Q13315 ATM Serine-protein kinase ATM yes yes 0 0 0 By MS/MS 2 0 1 1 77.678 74.988 3 0.00013752 91300 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 65.231 53.313 7904400 0 0 7904400 0 0 0 0 0 0 0 0 0 0 0 0 55010 2269 49417 462305 365784 365784 0 VDHVQMIVLDEADK Oxidation (M) 1626.7923 0.792322 1199 P26196 DDX6 Probable ATP-dependent RNA helicase DDX6 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 8.15 3.37 3 10 3 1 1 1 2 1 1 2 1 59.369 58.937 2;3 0.0004196 67055 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 58.079 54.019 74125000 0 0 31989000 0 0 5475200 4482700 0 3288500 8772500 0 7269400 2145300 7294700 3408100 55011 1199 49418 462306;462307;462308;462309;462310;462311;462312;462313;462314;462315;462316;462317;462318 365785;365786;365787;365788;365789;365790;365791;365792;365793;365794 365785 1747 10 VDHVQMIVLDEADK Unmodified 1610.7974 0.79740737 1199 P26196 DDX6 Probable ATP-dependent RNA helicase DDX6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 69.779 69.146 3 0.00017172 90804 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.534 67.907 105110000 11785000 0 0 3695800 3677900 10493000 4376200 9740100 5219400 9070900 8096100 0 6186500 8761300 24008000 55012 1199 49418 462319;462320;462321;462322;462323;462324;462325;462326;462327;462328;462329;462330;462331 365795;365796;365797;365798;365799;365800;365801;365802;365803;365804;365805 365799 10 VDIAPHVR Unmodified 905.5083 0.50830006 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.28 31.468 2 0.010595 32777 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.146 45.293 158420000 0 0 0 8641300 10225000 16816000 9742400 9104600 6320100 14015000 13478000 24375000 10558000 13161000 21988000 55013 3641 49419 462332;462333;462334;462335;462336;462337;462338;462339;462340;462341;462342;462343 365806;365807;365808;365809;365810;365811 365808 5 VDIDAPDVDVHGPDWHLK Unmodified 2026.9749 0.97485447 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 0 0 By MS/MS By MS/MS By MS/MS 2.22 0.416 7 2 5 3 1 80.962 76.133 3;4 1.5144E-05 95626 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 57.708 52.048 650660000 427850000 216960000 5858900 0 0 0 0 0 0 0 0 0 0 0 0 55014 2172 49420 462344;462345;462346;462347;462348;462349;462350;462351;462352 365812;365813;365814;365815;365816;365817 365812 4 VDIDAPDVEVHDPDWHLK Unmodified 2098.996 0.99598384 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS 2 0 1 1 81.293 73.162 4 9.2718E-06 95843 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.429 78.265 43845000 43845000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55015 2172 49421 462353 365818;365819 365819 2 VDIDAPDVSIEGPDAK Unmodified 1639.7941 0.79409613 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.47 2 1 14 1 1 1 1 1 2 1 1 1 1 1 2 1 72.451 72.535 2 1.1298E-07 83466 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 111.79 102.11 253530000 0 0 0 16263000 14613000 25230000 17533000 34388000 14326000 17410000 16022000 20262000 23381000 23871000 30228000 55016 2172 49422 462354;462355;462356;462357;462358;462359;462360;462361;462362;462363;462364;462365;462366;462367;462368 365820;365821;365822;365823;365824;365825;365826;365827;365828;365829 365820 9 VDIDDHTDLAIEYEVSAVPTVLAMK Oxidation (M) 2759.3575 0.35752781 4060 Q99757 TXN2 Thioredoxin, mitochondrial yes yes 0 1 0 By MS/MS 2 0 1 1 96.482 88.351 3 5.1125E-08 114184 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.868 59.422 19131000 19131000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55017 4060 49423 462369 365830 365830 5557 1 VDIDTPDIDIHGPEGK Unmodified 1719.8315 0.83154427 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.39 3.7 5 1 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 71.363 70.322 3 0.0001996 80116 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 67.846 67.846 364860000 58811000 144040000 10870000 8288500 7088600 11293000 6595600 11073000 13857000 8312000 13226000 16959000 11502000 13358000 29583000 55018 2172 49424 462370;462371;462372;462373;462374;462375;462376;462377;462378;462379;462380;462381;462382;462383;462384;462385;462386;462387 365831;365832;365833;365834;365835;365836;365837;365838;365839;365840;365841;365842;365843;365844;365845;365846;365847 365844 15 VDIDTPDINIEGSEGK Unmodified 1700.8105 0.81047448 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS 10 0 1 1 73.329 72.921 2 2.6287E-06 84201 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 99.531 79.324 10879000 0 0 0 0 10879000 0 0 0 0 0 0 0 0 0 0 55019 2172 49425 462388 365848 365848 1 VDIDVPDVDVQGPDWHLK Unmodified 2046.0058 0.0058202445 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 0 0 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 88.312 83.864 3 1.9658E-05 85822 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 75.463 44.92 130240000 71529000 53156000 5554900 0 0 0 0 0 0 0 0 0 0 0 0 55020 2172 49426 462389;462390;462391;462392;462393 365849;365850;365851;365852;365853;365854 365850 6 VDIDVPDVNIEGPDAK Unmodified 1694.8363 0.8362953 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 2 16 1 1 1 1 1 2 2 1 2 1 2 1 1 1 80.128 79.801 2 8.1497E-21 92320 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 137.59 1.3195 1048600000 0 459640000 3987900 16309000 28507000 37802000 36581000 61200000 41869000 57986000 40940000 91767000 36605000 43459000 91997000 55021 2172 49427 462394;462395;462396;462397;462398;462399;462400;462401;462402;462403;462404;462405;462406;462407;462408;462409;462410;462411 365855;365856;365857;365858;365859;365860;365861;365862;365863;365864;365865;365866;365867;365868;365869;365870;365871;365872 365856 17 VDIDVPDVNIEGPEGK Unmodified 1694.8363 0.8362953 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 0 0 By MS/MS By MS/MS 5 3.56 1 1 1 2 1 81.657 79.043 2;3 0.00096773 97498 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.158 0 52258000 0 38941000 0 0 0 0 0 0 13317000 0 0 0 0 0 0 55022 2172 49428 462412;462413;462414 365873;365874 365873 1 VDIDVPDVNLEAPEGK Unmodified 1708.8519 0.85194536 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81.381 80.618 2 5.745E-05 95512 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 103.75 87.119 333810000 27113000 6876900 0 6133800 15285000 20518000 16490000 27812000 21890000 25182000 29279000 38704000 26391000 24272000 47859000 55023 2172 49429 462415;462416;462417;462418;462419;462420;462421;462422;462423;462424;462425;462426;462427;462428 365875;365876;365877;365878;365879;365880;365881;365882;365883;365884;365885;365886;365887;365888;365889 365881 15 VDIDVPDVNVQGPDWHLK Unmodified 2045.0218 0.02180466 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS 3 0 1 1 86.902 83.687 3 0.0021864 100181 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 40.515 36.611 4709200 0 4709200 0 0 0 0 0 0 0 0 0 0 0 0 0 55024 2172 49430 462429 365890 365890 1 VDIEAPDVSLEGPEGK Unmodified 1653.8097 0.8097462 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 75.265 74.694 2 1.2452E-28 86118 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 140.62 121.88 693860000 27811000 0 0 30707000 38538000 42987000 49311000 58015000 50078000 53499000 51172000 74790000 71696000 52673000 92578000 55025 2172 49431 462430;462431;462432;462433;462434;462435;462436;462437;462438;462439;462440;462441;462442 365891;365892;365893;365894;365895;365896;365897;365898;365899;365900;365901;365902;365903;365904;365905 365895 15 VDIEGPDVNIEGPEGK Unmodified 1666.805 0.80499517 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 70.163 69.02 2 5.6883E-31 87344 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 136.24 126.24 1176800000 29094000 352710000 0 35615000 37404000 56647000 51926000 61679000 59540000 59936000 71425000 96587000 82069000 77691000 104430000 55026 2172 49432 462443;462444;462445;462446;462447;462448;462449;462450;462451;462452;462453;462454;462455;462456;462457 365906;365907;365908;365909;365910;365911;365912;365913;365914;365915;365916;365917;365918;365919 365912 14 VDIETPNLEGTLTGPR Unmodified 1710.8788 0.87882882 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 79.242 79.372 2 0.00036317 91685 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 82.543 64.734 45983000 0 0 0 0 0 11347000 0 16005000 0 0 18631000 0 0 0 0 55027 2172 49433 462458;462459;462460 365920;365921 365921 2 VDILDPALLR Unmodified 1123.6601 0.66010926 1066 P17980 PSMC3 26S protease regulatory subunit 6A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 85.575 85.642 2 0.010028 99191 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 56.729 41.579 103620000 0 0 0 4747300 7015500 10783000 3643200 4839000 2709000 13389000 14437000 23979000 3153700 3498300 11423000 55028 1066 49434 462461;462462;462463;462464;462465;462466;462467;462468;462469;462470;462471;462472 365922;365923;365924;365925;365926;365927;365928;365929 365922 8 VDILEMLQK Unmodified 1087.5947 0.59473181 4596 Q9NRA8 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 87.973 88.109 2 0.04941 102016 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.301 48.474 7140100 0 0 0 0 0 1084700 0 0 0 0 2082000 0 0 0 3973400 55029 4596 49435 462473;462474;462475 365930 365930 0 VDILYNNIK Unmodified 1090.6023 0.60226003 5231 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.523 62.62 2 0.0089253 71654 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 68.214 35.374 98076000 0 0 0 4521800 4847000 10599000 6132700 8960700 6284200 7744400 9301600 9104900 6853300 8073500 15653000 55030 5231 49436 462476;462477;462478;462479;462480;462481;462482;462483;462484;462485;462486;462487 365931;365932;365933;365934;365935;365936;365937;365938 365936 8 VDINAPDVDVHGPDWHLK Unmodified 2025.9908 0.99083888 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 4 2 4 2 79.58 74.891 3;4 0.00031054 94703 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.034 39.68 80804000 38353000 42450000 0 0 0 0 0 0 0 0 0 0 0 0 0 55031 2172 49437 462488;462489;462490;462491;462492;462493 365939;365940;365941 365939 3 VDINAPDVDVQGPDWHLK Unmodified 2016.9905 0.99050453 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 6.56 3.86 3 1 5 1 2 1 1 1 1 1 1 81.038 79.06 3 1.775E-15 91691 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.138 69.902 265350000 28390000 196660000 6918900 0 0 0 0 4115000 7186200 3193500 0 0 0 4565200 14318000 55032 2172 49438 462494;462495;462496;462497;462498;462499;462500;462501;462502 365942;365943;365944;365945;365946;365947;365948;365949 365943 8 VDINAPDVDVR Unmodified 1211.6146 0.61461563 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 59.342 59.524 2 0.0035122 67971 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 73.067 58.4 77692000 0 0 0 0 5177000 4227700 4963400 7769600 5355100 5138300 6656600 10555000 9834500 7381600 10634000 55033 2172 49439 462503;462504;462505;462506;462507;462508;462509;462510;462511;462512;462513 365950;365951;365952;365953;365954;365955;365956;365957;365958;365959;365960 365958 10 VDINAPDVEVHGPDWHLK Unmodified 2040.0065 0.0064889465 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 80.552 75.15 4 0.00013189 96081 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.203 47.433 51346000 19122000 32223000 0 0 0 0 0 0 0 0 0 0 0 0 0 55034 2172 49440 462514;462515;462516 365961;365962 365962 2 VDINAPDVEVQGK Unmodified 1382.7042 0.70415892 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.773 56.893 2 2.4949E-32 64512 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 164.04 135.8 442680000 0 0 0 29673000 30479000 23388000 43273000 42566000 27319000 26658000 22956000 66330000 35322000 41524000 53196000 55035 2172 49441 462517;462518;462519;462520;462521;462522;462523;462524;462525;462526;462527;462528 365963;365964;365965;365966;365967;365968;365969;365970;365971;365972;365973 365965 9 VDINAPDVGVQGPDWHLK Unmodified 1958.985 0.98502522 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 79.329 78.712 3 8.5391E-06 90635 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.567 63.358 245270000 0 119460000 6960400 0 0 12049000 0 12076000 16512000 10212000 0 14350000 12841000 11748000 29059000 55036 2172 49442 462529;462530;462531;462532;462533;462534;462535;462536;462537;462538 365974;365975;365976;365977;365978;365979;365980;365981;365982;365983 365977 9 VDINTEDLEDGTCR Unmodified 1635.7046 0.7046292 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.289 56.413 2 9.6391E-17 64267 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 147.37 131.48 240770000 0 0 0 11524000 10088000 18226000 10947000 11422000 10749000 19765000 28166000 28315000 17534000 23717000 50317000 55037 1124 49443 462539;462540;462541;462542;462543;462544;462545;462546;462547;462548;462549;462550 365984;365985;365986;365987;365988;365989;365990;365991;365992;365993;365994;365995;365996;365997 365994 14 VDINTEDLEDGTCRVTYCPTEPGNYIINIK Unmodified 3498.6283 0.62829972 1124 P21333 FLNA Filamin-A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 89.089 83.943 3 5.7893E-134 105631 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 151.65 147.89 126510000 53458000 41675000 31377000 0 0 0 0 0 0 0 0 0 0 0 0 55038 1124 49444 462551;462552;462553 365998;365999;366000 365998 3 VDINTPDVDVHGPDWHLK Unmodified 2056.0014 0.0014035686 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS 2 0 1 1 80.829 72.698 4 0.0017125 95319 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 34.748 32.132 16321000 16321000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55039 2172 49445 462554 366001 366001 1 VDIQTEDLEDGTCK Unmodified 1621.7141 0.71413125 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 5 4.1 1 2 2 1 2 1 1 54.586 47.636 2 1.8841E-18 64502 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 149.23 139 37178000 16385000 20793000 0 0 0 0 0 0 0 0 0 0 0 0 0 55040 487 49446 462555;462556;462557;462558;462559 366002;366003;366004;366005;366006 366003 5 VDISAPDVDVHGPDWHLK Unmodified 1998.9799 0.97993984 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS 2 0 1 1 81.863 77.158 4 0.016494 96067 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 32.627 28.765 32014000 0 32014000 0 0 0 0 0 0 0 0 0 0 0 0 0 55041 2172 49447 462560 366007 366007 1 VDISEDGMK Unmodified 992.44846 0.4484615 1424 P40937 RFC5 Replication factor C subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34.484 33.826 2 0.006731 37615 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 74.301 34.198 511180000 7491700 119800000 0 17535000 21160000 30185000 20743000 32004000 20170000 33777000 44744000 44618000 37476000 29230000 52241000 55042 1424 49448 462561;462562;462563;462564;462565;462566;462567;462568;462569;462570;462571;462572;462573;462574 366008;366009;366010;366011;366012;366013;366014;366015 366012 4 VDISEDGMK Oxidation (M) 1008.4434 0.44337612 1424 P40937 RFC5 Replication factor C subunit 5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 19.127 19.252 2 0.015429 19607 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 51.066 39.655 101030000 0 0 0 9098000 9545700 13047000 12074000 8122000 0 16240000 14714000 18186000 0 0 0 55043 1424 49448 462575;462576;462577;462578;462579;462580;462581;462582 366016;366017;366018 366018 2244 3 VDISGNGMGDMGAK 2 Oxidation (M) 1382.5806 0.58061466 2833 Q5VZK9 LRRC16A Leucine-rich repeat-containing protein 16A yes yes 0 2 0 By MS/MS 10 0 1 1 19.357 19.519 2 0.024908 19928 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 40.496 28.449 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55044 2833 49449 462583 366019 366019 4498 1 VDISGNGMGDMGAK Oxidation (M) 1366.5857 0.58570004 2833 Q5VZK9 LRRC16A Leucine-rich repeat-containing protein 16A yes yes 0 1 0 By MS/MS 2 0 1 1 35.56 30.713 2 0.0010744 40271 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.494 72.229 10541000 0 10541000 0 0 0 0 0 0 0 0 0 0 0 0 0 55045 2833 49449 462584 366020 366020 4498 1 VDISGNGMGDMGAK Unmodified 1350.5908 0.59078542 2833 Q5VZK9 LRRC16A Leucine-rich repeat-containing protein 16A yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS 8.4 3.2 1 4 1 1 1 1 1 47.757 46.833 2 9.1035E-31 58175 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 147.91 134.93 44938000 0 26740000 0 0 1762400 0 0 0 0 3309500 0 3104600 0 0 10022000 55046 2833 49449 462585;462586;462587;462588;462589 366021;366022 366021 2 VDISQGIPK Unmodified 955.53385 0.53384611 3790 Q96D46 NMD3 60S ribosomal export protein NMD3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.01 1 1 8 1 1 1 1 1 1 1 1 1 1 49.26 48.127 2 0.021764 60689 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.665 11.665 476180000 400010 309360000 0 17356000 16928000 32291000 20053000 15225000 14539000 0 0 0 22528000 27498000 0 55047 3790 49450 462590;462591;462592;462593;462594;462595;462596;462597;462598;462599 366023;366024 366023 2 VDIVAINDPFIDLNYMVYMFQYDSTHGK Unmodified 3307.557 0.55697268 782 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS 2 0.816 2 2 2 4 2 105.86 104.26 3;4 1.9389E-137 95548 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 155.16 144.65 266400000 254910000 11486000 0 0 0 0 0 0 0 0 0 0 0 0 0 55048 782 49451 462600;462601;462602;462603;462604;462605 366025;366026;366027;366028;366029;366030 366028 5 VDIVAINDPFIDLNYMVYMFQYDSTHGK Oxidation (M) 3323.5519 0.5518873 782 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 0 1 0 By MS/MS 2 0 3 3 102.72 94.594 3 1.3159E-29 119365 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.181 87.227 110680000 110680000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55049 782 49451 462606;462607;462608 366031;366032;366033;366034 366031 943;944 4 VDKIEELDQENEAALENGIK Unmodified 2256.1121 0.11213581 1473 P43243 MATR3 Matrin-3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 72.057 72.198 3 1.8253E-06 82957 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.422 61.085 107010000 0 0 0 0 4644000 0 0 23998000 5840400 10915000 14276000 10238000 12127000 10485000 14491000 55050 1473 49452 462609;462610;462611;462612;462613;462614;462615;462616;462617 366035;366036;366037;366038;366039;366040;366041;366042;366043 366042 9 VDLEPVSPR Unmodified 1010.5397 0.53965977 4515 Q9HCH0 NCKAP5L Nck-associated protein 5-like yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 47.207 47.599 2 0.037714 53565 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 45.161 27.775 90249000 0 0 0 0 0 0 0 10849000 6427600 15923000 12593000 18120000 10623000 0 15713000 55051 4515 49453 462618;462619;462620;462621;462622;462623;462624 366044 366044 1 VDLETVPK Unmodified 899.4964 0.49639797 3238 Q8IWC1 MAP7D3 MAP7 domain-containing protein 3 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.095 43.271 2 0.011282 48308 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 77.282 42.39 129550000 0 0 0 9854700 1447000 7054800 9660600 8952600 8013200 10163000 14467000 15730000 17225000 10851000 16126000 55052 3238 49454 462625;462626;462627;462628;462629;462630;462631;462632;462633;462634;462635;462636 366045;366046;366047;366048;366049;366050;366051;366052 366045 8 VDLGGFAGLFDLK Unmodified 1350.7184 0.71835242 1134 P22102 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4 3.03 2 2 1 2 2 1 98.86 94.948 2 4.6659E-08 117713 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.8 114.38 71265000 26682000 42307000 0 0 0 0 0 0 0 0 0 0 0 0 2276400 55053 1134 49455 462637;462638;462639;462640;462641 366053;366054;366055;366056;366057 366053 5 VDLGVLGK Unmodified 799.48035 0.48035398 1380 P36871 PGM1 Phosphoglucomutase-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3.89 3.28 6 1 2 3 2 2 1 1 63.889 59.45 1;2 0.011315 76052 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.25 66.648 3900400000 219140000 3404600000 105720000 0 0 0 0 0 0 0 0 38039000 0 0 132880000 55054 1380 49456 462642;462643;462644;462645;462646;462647;462648;462649;462650 366058;366059;366060;366061;366062 366059 3 VDLHEGCGRTK Unmodified 1270.6088 0.60881874 522 O75592 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 yes yes 0 0 1 By MS/MS 2 0 1 1 14.825 10.776 3 0.029553 16094 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 35.204 16.072 11394000 11394000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55055 522 49457 462651 366063 366063 1 VDLHTSGEHSELVQEENLSPGTQTPSNDK Unmodified 3147.4592 0.45924378 5127 Q9Y2X9 ZNF281 Zinc finger protein 281 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 56.492 56.791 4 6.439E-05 63746 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 29.54 27.001 31947000 0 0 0 0 0 0 0 0 5295100 0 0 0 7559500 6272600 12820000 55056 5127 49458 462652;462653;462654;462655 366064;366065;366066 366064 3 VDLIELSEK Unmodified 1044.5703 0.5702912 2863 Q69YN4 KIAA1429 Protein virilizer homolog yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 70.076 69.513 2 0.018165 80108 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 55.064 35.549 8427000 0 0 0 4315100 4111900 0 0 0 0 0 0 0 0 0 0 55057 2863 49459 462656;462657 366067;366068;366069 366068 3 VDLLEQTK Unmodified 944.51786 0.51786169 2788 Q5T9S5 CCDC18 Coiled-coil domain-containing protein 18 yes yes 0 0 0 By MS/MS 2 0 1 1 47.64 42.077 2 0.018206 54680 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.9 73.807 14379000 0 14379000 0 0 0 0 0 0 0 0 0 0 0 0 0 55058 2788 49460 462658 366070 366070 0 VDLLNQEIEFLK Unmodified 1459.7922 0.79224564 79 CON__P35908v2;P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 4 2 12 3 2 1 1 1 1 1 1 1 1 1 1 1 1 1 91.315 90.272 2 1.9226E-43 104834 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 182.64 165.41 + 4657700000 91547000 1069200000 493590 163910000 180950000 233820000 112260000 352340000 255820000 756910000 419320000 331460000 145290000 172000000 372350000 55059 79 49461 462659;462660;462661;462662;462663;462664;462665;462666;462667;462668;462669;462670;462671;462672;462673;462674;462675;462676 366071;366072;366073;366074;366075;366076;366077;366078;366079;366080;366081;366082;366083;366084;366085;366086;366087;366088;366089;366090;366091;366092;366093;366094;366095;366096;366097;366098;366099;366100;366101;366102;366103;366104;366105;366106;366107;366108 366072 36 VDLNSNGFICDYELHELFK Unmodified 2312.0783 0.078333261 986 P13797 PLS3 Plastin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 3 1 95.758 91.066 3 5.9075E-11 109057 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 99.891 91.802 282250000 143940000 136360000 1953700 0 0 0 0 0 0 0 0 0 0 0 0 55060 986 49462 462677;462678;462679;462680;462681 366109;366110;366111;366112;366113 366112 5 VDLPLAVLSK Unmodified 1053.6434 0.64339656 4429 Q9H773 DCTPP1 dCTP pyrophosphatase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 84.918 85.041 2 0.012071 98157 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.124 44.591 40618000 0 0 0 0 0 3679500 0 0 0 0 8333200 5727400 2614100 5725500 14538000 55061 4429 49463 462682;462683;462684;462685;462686;462687 366114;366115;366116 366114 3 VDLQSLPTR Unmodified 1027.5662 0.56620887 4279 Q9C005 DPY30 Protein dpy-30 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.863 53.005 2 0.0016953 58674 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 141.2 74.514 1089300000 0 0 0 26800000 27419000 91324000 41172000 41138000 66068000 89577000 207350000 150830000 118580000 83310000 145730000 55062 4279 49464 462688;462689;462690;462691;462692;462693;462694;462695;462696;462697;462698;462699 366117;366118;366119;366120;366121;366122;366123;366124;366125;366126;366127 366119 10 VDLSLPNIGIK Unmodified 1167.6863 0.68632401 2096 Q03426 MVK Mevalonate kinase yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS 10 0 5 1 1 1 1 1 84.787 84.921 2 0.0037222 98091 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.216 50.179 12079000 0 0 0 0 0 0 0 0 0 2483800 2272300 0 1461400 1751300 4109600 55063 2096 49465 462700;462701;462702;462703;462704 366128 366128 1 VDLSNSRVLEK Unmodified 1258.6881 0.68811492 4350 Q9H1H9 KIF13A Kinesin-like protein KIF13A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.33 0.471 2 1 1 1 1 45.216 39.857 3 0.016265 50717 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 54.65 32.595 30828000 4896100 4545200 21387000 0 0 0 0 0 0 0 0 0 0 0 0 55064 4350 49466 462705;462706;462707 366129;366130 366130 1 VDLSSWR Unmodified 861.43447 0.43446642 1382 P36915 GNL1 Guanine nucleotide-binding protein-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 54.473 54.757 2 0.035265 62434 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 70.912 45.914 76090000 0 0 0 0 0 11072000 4928600 7753400 5059600 7242800 10624000 7663000 10981000 0 10766000 55065 1382 49467 462708;462709;462710;462711;462712;462713;462714;462715;462716 366131 366131 1 VDLSTSTDWK Unmodified 1150.5506 0.55061839 4088 Q9BQ69 MACROD1 O-acetyl-ADP-ribose deacetylase MACROD1 yes yes 0 0 0 By MS/MS 2 0 1 1 57.799 51.968 2 0.0040073 67311 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.05 100.79 40926000 0 40926000 0 0 0 0 0 0 0 0 0 0 0 0 0 55066 4088 49468 462717 366132 366132 0 VDLTEEGALAGQEK Unmodified 1458.7202 0.72020291 4717 Q9NX57 RAB20 Ras-related protein Rab-20 yes yes 0 0 0 By MS/MS 2 0 1 1 58.111 52.28 2 1.3166E-29 67400 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 143.17 120.53 17135000 0 17135000 0 0 0 0 0 0 0 0 0 0 0 0 0 55067 4717 49469 462718 366133 366133 1 VDLTLDWLTETSEEAK Unmodified 1848.8993 0.89928949 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 0 0 By MS/MS By MS/MS 2.67 0.471 1 2 2 1 95.495 90.532 2 0.00058394 109772 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 103.88 85.135 136390000 131830000 4568600 0 0 0 0 0 0 0 0 0 0 0 0 0 55068 1564 49470 462719;462720;462721 366134;366135;366136;366137 366135 4 VDLTNPQYTVVVEIIK Unmodified 1830.0139 0.013865735 4726 Q9NXG2 THUMPD1 THUMP domain-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 96.745 88.614 2 0.036945 114486 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.101 33.136 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55069 4726 49471 462722 366138 366138 1 VDLTPYPTISSINK Unmodified 1546.8243 0.82427405 357 O43708 GSTZ1 Maleylacetoacetate isomerase yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 80.115 76.579 2 0.0014221 91963 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 70.942 55.312 214570000 0 211620000 2942700 0 0 0 0 0 0 0 0 0 0 0 0 55070 357 49472 462723;462724;462725 366139;366140;366141 366140 3 VDLTQSSVTNASSGNDHLNMEK Oxidation (M) 2362.0707 0.0706817 2561 Q15652 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 49.357 44.059 3 0.00057712 57277 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 50.202 41.493 19712000 0 19712000 0 0 0 0 0 0 0 0 0 0 0 0 0 55071 2561 49473 462726;462727 366142 366142 4215 1 VDLTQSSVTNASSGNDHLNMEK Unmodified 2346.0758 0.075767078 2561 Q15652 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 58.684 53.344 3 1.602E-07 68643 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.771 67.243 16404000 0 16404000 0 0 0 0 0 0 0 0 0 0 0 0 0 55072 2561 49473 462728;462729 366143 366143 1 VDLTRYLENQTFR Unmodified 1653.8475 0.84746911 116 O00139 KIF2A Kinesin-like protein KIF2A yes yes 0 0 1 By MS/MS 10 0 1 1 58.203 58.37 3 0.047783 66091 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 20.857 7.5824 8258700 0 0 0 0 0 0 0 0 8258700 0 0 0 0 0 0 55073 116 49474 462730 366144 366144 1 VDLVCHGK Unmodified 926.46439 0.46438634 4009 Q99447 PCYT2 Ethanolamine-phosphate cytidylyltransferase yes yes 0 0 0 By MS/MS By MS/MS By matching 2 0 3 1 1 1 21.426 17.651 2 0.024403 23093 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.32 54.437 59592000 13185000 26743000 19663000 0 0 0 0 0 0 0 0 0 0 0 0 55074 4009 49475 462731;462732;462733 366145;366146 366145 2 VDLVDENFTELR Unmodified 1448.7147 0.7147236 1832 P61086 UBE2K Ubiquitin-conjugating enzyme E2 K yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 80.134 80.22 2 2.5787E-05 92402 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 112.13 84.116 50524000 0 0 0 0 1770500 7026300 0 2425800 1686700 7370100 0 8457600 3362500 4993300 13431000 55075 1832 49476 462734;462735;462736;462737;462738;462739;462740;462741;462742;462743;462744 366147;366148;366149;366150;366151;366152;366153 366149 7 VDLVDENFTELRGEIAGPPDTPYEGGRYQLEIK Unmodified 3719.8319 0.83188521 1832 P61086 UBE2K Ubiquitin-conjugating enzyme E2 K yes yes 0 0 2 By MS/MS 2.33 0.471 2 1 3 93.173 86.578 3;4 2.3224E-215 110914 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 180.48 173.2 158830000 158830000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55076 1832 49477 462745;462746;462747 366154;366155;366156;366157 366156 4 VDLVLEK Unmodified 814.48002 0.48001963 1064 P17900 GM2A Ganglioside GM2 activator;Ganglioside GM2 activator isoform short yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 50.859 50.791 2 0.023356 56538 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 89.55 20.316 175970000 0 0 0 104140000 21914000 0 0 24116000 0 0 0 25802000 0 0 0 55077 1064 49478 462748;462749;462750;462751 366158;366159;366160;366161;366162;366163;366164 366159 7 VDLVLLGK Unmodified 855.54295 0.54295423 1394 P38117 ETFB Electron transfer flavoprotein subunit beta yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 76.074 75.559 2 0.025168 87163 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 58.917 48.492 238050000 0 53076000 19781000 11357000 8435200 13230000 12843000 11753000 12348000 14473000 15090000 19944000 0 16165000 29555000 55078 1394 49479 462752;462753;462754;462755;462756;462757;462758;462759;462760;462761;462762;462763;462764 366165;366166;366167;366168;366169;366170;366171;366172 366165 8 VDMLSEINIAPR Unmodified 1356.7071 0.7071358 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 82.695 82.77 2 2.4765E-05 95750 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 107.24 91.106 21544000 0 0 0 0 2052000 3967200 1548200 4688900 2464500 3075000 0 0 0 3748600 0 55079 19 49480 462765;462766;462767;462768;462769;462770;462771 366173;366174;366175;366176 366175 4 VDMLSEINIAPR Oxidation (M) 1372.7021 0.70205043 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 1 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 70.339 70.428 2 0.003946 81128 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 52.49 33.175 598760000 0 0 0 0 28297000 117640000 78202000 0 0 81784000 60469000 138920000 54464000 38979000 0 55080 19 49480 462772;462773;462774;462775;462776;462777;462778;462779 366177;366178 366178 22 2 VDMMDLPR Acetyl (Protein N-term) 1017.4623 0.46233743 1346 P35244 RPA3 Replication protein A 14 kDa subunit yes yes 1 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 85.055 85.213 2 0.027167 98357 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.067 24.526 6412700 0 0 0 0 0 0 0 1155600 0 1632900 0 0 0 0 3624200 55081 1346 49481 462780;462781;462782 366179 366179 1 VDNALQSGNSQESVTEQDSK Unmodified 2134.9614 0.96144883 747 P01834 IGKC Ig kappa chain C region yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 32.55 32.736 2;3 8.2973E-47 35596 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 142.1 124.73 991150000 0 0 0 237880000 33505000 32618000 27046000 294930000 17250000 152110000 49248000 44617000 60253000 13903000 27793000 55082 747 49482 462783;462784;462785;462786;462787;462788;462789;462790;462791;462792;462793;462794;462795;462796;462797;462798;462799;462800;462801;462802;462803;462804;462805;462806 366180;366181;366182;366183;366184;366185;366186;366187;366188;366189;366190;366191;366192 366182 13 VDNDENEHQLSLR Unmodified 1567.7227 0.72266253 830 P06748 NPM1 Nucleophosmin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.97 3.45 9 1 29 4 4 2 2 2 2 2 3 3 2 3 2 3 3 2 33.083 32.234 2;3 3.2628E-65 44076 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 212.9 196.27 6875700000 179610000 401170000 45221000 327410000 273970000 430760000 343550000 416480000 381330000 478880000 766720000 745800000 551960000 412740000 1120100000 55083 830 49483 462807;462808;462809;462810;462811;462812;462813;462814;462815;462816;462817;462818;462819;462820;462821;462822;462823;462824;462825;462826;462827;462828;462829;462830;462831;462832;462833;462834;462835;462836;462837;462838;462839;462840;462841;462842;462843;462844;462845 366193;366194;366195;366196;366197;366198;366199;366200;366201;366202;366203;366204;366205;366206;366207;366208;366209;366210;366211;366212;366213;366214;366215;366216;366217;366218;366219;366220;366221;366222;366223 366207 19 VDNDENEHQLSLRTVSLGAGAK Unmodified 2352.167 0.16696535 830 P06748 NPM1 Nucleophosmin yes yes 0 0 1 By MS/MS By MS/MS 2.2 0.4 4 1 3 2 67.193 61.357 3;4 9.5629E-50 82521 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 124.31 116.32 803300000 642380000 0 160920000 0 0 0 0 0 0 0 0 0 0 0 0 55084 830 49484 462846;462847;462848;462849;462850 366224;366225;366226;366227;366228;366229 366226 6 VDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIK Unmodified 4478.166 0.16598565 830 P06748 NPM1 Nucleophosmin yes yes 0 0 2 By MS/MS 2 0 1 1 94.471 86.341 5 7.5585E-12 111672 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.449 38.516 22151000 22151000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55085 830 49485 462851 366230 366230 1 VDNEFDQR Unmodified 1021.4465 0.44648767 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 20.847 21.014 2 0.00019851 21826 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 153.78 137.58 165570000 0 0 0 10188000 8949900 13989000 11543000 10653000 7445800 18029000 18722000 28271000 17551000 20226000 0 55086 2392 49486 462852;462853;462854;462855;462856;462857;462858;462859;462860;462861;462862 366231;366232;366233;366234;366235;366236;366237;366238;366239;366240 366237 10 VDNFVSTHLDK Unmodified 1273.6303 0.63026569 3879 Q96IK1 BOD1 Biorientation of chromosomes in cell division protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 1 2 1 1 2 2 2 2 2 2 45.343 45.519 2;3 0.00066247 50172 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 78.098 43.711 398210000 0 0 0 20120000 22189000 17927000 23155000 21904000 19141000 37082000 46091000 51695000 46053000 36075000 56776000 55087 3879 49487 462863;462864;462865;462866;462867;462868;462869;462870;462871;462872;462873;462874;462875;462876;462877;462878;462879;462880;462881;462882;462883 366241;366242;366243;366244;366245;366246;366247;366248;366249;366250 366248 9 VDNHLFNK Unmodified 985.49813 0.49812931 1537;1978 P48426;P78356 PIP4K2A;PIP4K2B Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha;Phosphatidylinositol 5-phosphate 4-kinase type-2 beta no no 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 30.202 25.703 2 0.01018 33034 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 113.41 80.941 61638000 39249000 0 22388000 0 0 0 0 0 0 0 0 0 0 0 0 55088 1537;1978 49488 462884;462885 366251;366252;366253;366254 366254 4 VDNIQAGELTEGIWR Unmodified 1699.8529 0.85294842 2163 Q08945 SSRP1 FACT complex subunit SSRP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching 10 0 5 1 1 1 1 1 82.025 82.165 2 0.020413 95034 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 43.544 33.59 15699000 0 0 0 0 0 2649800 0 2319600 2027600 0 0 0 0 1736300 6965500 55089 2163 49489 462886;462887;462888;462889;462890 366255 366255 1 VDNIQAGELTEGIWRR Unmodified 1855.9541 0.95405945 2163 Q08945 SSRP1 FACT complex subunit SSRP1 yes yes 0 0 1 By MS/MS 10 0 1 1 77.022 77.297 3 1.8966E-06 88817 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.466 84.849 8186700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8186700 55090 2163 49490 462891 366256 366256 1 VDNISESTDK Unmodified 1106.5091 0.5091475 3631 Q92576 PHF3 PHD finger protein 3 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.98 14.143 2 0.0018051 13391 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 88.496 66.749 202300000 0 0 0 13836000 15168000 14818000 15754000 13829000 11266000 18618000 24199000 19631000 21595000 12102000 21483000 55091 3631 49491 462892;462893;462894;462895;462896;462897;462898;462899;462900;462901;462902;462903 366257;366258;366259;366260;366261;366262;366263 366262 7 VDNLEEFLNDPLK Unmodified 1544.7722 0.77223848 2189 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 89.101 89.229 2 0.00060211 103305 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.332 57.66 8032900 0 0 0 0 0 0 0 0 0 2083100 0 0 0 0 5949700 55092 2189 49492 462904;462905 366264;366265 366265 2 VDNLTYR Unmodified 879.44503 0.4450311 2050 Q01130;Q9BRL6 SRSF2;SRSF8 Serine/arginine-rich splicing factor 2;Serine/arginine-rich splicing factor 8 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 25.803 26.042 2 0.023185 26325 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 102.77 48.009 1214300000 0 0 0 0 80042000 67363000 94564000 80791000 71704000 126510000 156550000 157960000 125180000 104180000 149510000 55093 2050 49493 462906;462907;462908;462909;462910;462911;462912;462913;462914;462915;462916;462917 366266;366267;366268;366269;366270;366271;366272;366273;366274;366275;366276 366268 9 VDNSSLTGESEPQTR Unmodified 1618.7435 0.74345755 792;1109 P05023;P13637;P50993;P20648 ATP1A1;ATP1A3;ATP1A2;ATP4A Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-3;Sodium/potassium-transporting ATPase subunit alpha-2;Potassium-transporting ATPase alpha chain 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.762 29.001 2 1.198E-09 30407 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 114.72 89.099 109430000 0 0 0 0 7472900 7710400 5555200 6570500 4960400 9877400 11937000 16231000 12829000 12137000 14147000 55094 792;1109 49494 462918;462919;462920;462921;462922;462923;462924;462925;462926;462927;462928;462929 366277;366278;366279;366280;366281;366282;366283;366284;366285;366286;366287;366288 366280 12 VDNVEVLDHEEEK Unmodified 1553.7209 0.72093119 156 O00443 PIK3C2A Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 39.052 39.239 3 0.035374 42480 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 23.481 14.43 23745000 0 0 0 0 6345600 0 0 0 0 0 0 9780600 0 7618400 0 55095 156 49495 462930;462931;462932 366289 366289 1 VDPAELFSQAPTEK Unmodified 1530.7566 0.75658842 708 O95985 TOP3B DNA topoisomerase 3-beta-1 yes yes 0 0 0 By MS/MS 2 0 1 1 82.067 77.362 2 0.0011317 96278 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.593 62.621 24098000 0 24098000 0 0 0 0 0 0 0 0 0 0 0 0 0 55096 708 49496 462933 366290 366290 1 VDPDSQQNHSEIK Unmodified 1495.6903 0.69029976 4233 Q9BXS6 NUSAP1 Nucleolar and spindle-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 13.207 13.317 3 0.0017736 11988 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.956 35.284 26994000 0 0 0 2577300 3536100 2759700 3353300 0 0 0 0 3327700 3901400 2894100 4644100 55097 4233 49497 462934;462935;462936;462937;462938;462939;462940;462941 366291;366292;366293;366294;366295 366291 5 VDPEIQNVK Unmodified 1040.5502 0.55022446 79 CON__P35908v2;P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal no no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.18 3.29 3 1 13 1 2 1 2 1 1 1 1 1 1 1 1 1 1 1 33.518 32.452 2 0.0030604 35985 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 123.72 106.48 + 42018000000 50258000 986530000 3172800 5500400000 2660300000 3815600000 2314900000 4737900000 2317200000 3561500000 3566100000 4750200000 4332300000 1878500000 1543500000 55098 79 49498 462942;462943;462944;462945;462946;462947;462948;462949;462950;462951;462952;462953;462954;462955;462956;462957;462958 366296;366297;366298;366299;366300;366301;366302;366303;366304;366305;366306;366307;366308;366309;366310;366311;366312;366313;366314;366315;366316;366317;366318;366319;366320;366321;366322;366323;366324;366325;366326;366327;366328;366329 366327 32 VDPGLGGPLVPDLEK Unmodified 1504.8137 0.81370936 676 O95630 STAMBP STAM-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 83.088 81.83 2 1.3839E-15 101208 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.03 102.35 291620000 5352500 249700000 2402000 0 1003200 3057000 1723900 1388900 0 3268600 3531400 4196600 1341600 4687000 9968900 55099 676 49499 462959;462960;462961;462962;462963;462964;462965;462966;462967;462968;462969;462970;462971;462972 366330;366331;366332;366333;366334;366335;366336;366337 366331 8 VDPLVSLMMVEK Oxidation (M) 1375.7091 0.70910964 1876 P62195 PSMC5 26S protease regulatory subunit 8 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 2 2 1 2 2 2 87.033 86.537 2 0.0003437 97899 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 78.342 56.298 254750000 0 93754000 13812000 2470600 12192000 18016000 3597200 0 0 36727000 32538000 41639000 0 0 0 55100 1876 49500 462973;462974;462975;462976;462977;462978;462979;462980;462981;462982;462983;462984;462985;462986;462987 366338;366339;366340;366341;366342;366343;366344;366345;366346;366347;366348;366349;366350 366340 3044;3045 9 VDPLVSLMMVEK Unmodified 1359.7142 0.71419502 1876 P62195 PSMC5 26S protease regulatory subunit 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 93.359 91.995 2 0.00030383 114797 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.69 92.18 546840000 26335000 494570000 0 0 1442800 2130500 0 981300 0 4747600 4987100 4639500 0 0 7015400 55101 1876 49500 462988;462989;462990;462991;462992;462993;462994;462995;462996 366351;366352;366353;366354;366355;366356;366357 366353 7 VDPLVSLMMVEK 2 Oxidation (M) 1391.704 0.70402426 1876 P62195 PSMC5 26S protease regulatory subunit 8 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 79.621 78.807 2 0.0011989 91165 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 74.53 63.04 277570000 0 88212000 21959000 0 18165000 18963000 5108600 0 0 30143000 33212000 34622000 7193700 6563800 13424000 55102 1876 49500 462997;462998;462999;463000;463001;463002;463003;463004;463005;463006;463007;463008;463009 366358;366359;366360;366361;366362;366363;366364;366365;366366 366366 3044;3045 4 VDPPFRPCLQSEEDVSQFDTR Unmodified 2521.1544 0.15435175 4854 Q9UBS0 RPS6KB2 Ribosomal protein S6 kinase beta-2 yes yes 0 0 1 By MS/MS 10 0 1 1 76.864 76.859 3 0.00015633 88865 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 47.75 36.912 10759000 0 0 0 0 0 10759000 0 0 0 0 0 0 0 0 0 55103 4854 49501 463010 366367;366368;366369 366369 3 VDPSHDASK Unmodified 954.44067 0.44067401 487 O75369 FLNB Filamin-B no no 0 0 0 By matching By MS/MS 2.33 0.471 2 1 1 2 5.5976 2.2712 2 0.016282 4220 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.219 48.264 1440300000 48505000 1391800000 0 0 0 0 0 0 0 0 0 0 0 0 0 55104 487 49502 463011;463012;463013 366370;366371 366370 2 VDPTYGLESSCIAGTGPDEPEK Unmodified 2321.0369 0.036921956 3687 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 2 2 2 1 1 2 2 69.733 69.793 2;3 1.6076E-33 80256 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 132.44 119.32 107590000 0 0 0 6035900 5757300 12324000 5454800 6862400 8967600 11697000 11664000 6805400 5111800 10644000 16265000 55105 3687 49503 463014;463015;463016;463017;463018;463019;463020;463021;463022;463023;463024;463025;463026;463027;463028;463029;463030;463031;463032;463033;463034;463035 366372;366373;366374;366375;366376;366377;366378;366379;366380;366381;366382;366383;366384;366385;366386 366385 15 VDPTYGLESSCIAGTGPDEPEKLEGAEEEK Unmodified 3206.4449 0.44489885 3687 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.91 3.42 2 1 8 1 2 1 1 1 1 1 1 1 1 75.543 74.125 3 0 91186 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 252.28 246.74 217540000 15536000 126400000 0 3639800 0 0 4100500 0 0 15118000 9431900 15409000 5966100 7255100 14678000 55106 3687 49504 463036;463037;463038;463039;463040;463041;463042;463043;463044;463045;463046 366387;366388;366389;366390;366391;366392;366393;366394;366395;366396;366397;366398 366391 12 VDPVDGVVLVDPDYLK Unmodified 1741.9138 0.91381734 1318 P32121 ARRB2 Beta-arrestin-2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 92.193 88.128 2 0.00081752 109446 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.531 87.921 27835000 0 27835000 0 0 0 0 0 0 0 0 0 0 0 0 0 55107 1318 49505 463047;463048 366399;366400 366399 2 VDPVIEQASK Unmodified 1084.5764 0.57643921 1634 P50616 TOB1 Protein Tob1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 34.248 34.286 2 0.006286 37539 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 65.535 43.839 68862000 0 0 0 0 7971100 8991600 11789000 0 10780000 12537000 0 0 16794000 0 0 55108 1634 49506 463049;463050;463051;463052;463053;463054 366401;366402;366403;366404;366405;366406;366407 366405 6 VDPVNFK Unmodified 817.4334 0.43340378 55;1969 CON__P01966;P02008;P69905 HBZ;HBA1 Hemoglobin subunit zeta;Hemoglobin subunit alpha no no 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 39.456 39.477 2 0.03857 42622 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 69.432 40.094 + 45144000 0 0 0 6020800 5607200 5055500 5072600 0 951280 8523100 8087400 0 0 5825900 0 55109 55;1969 49507 463055;463056;463057;463058;463059;463060;463061;463062 366408 366408 1 VDQALHTQTDADPAEEYAR Unmodified 2128.9661 0.96614027 1704 P52888 THOP1 Thimet oligopeptidase yes yes 0 0 0 By MS/MS 3 0 1 1 49.729 44.832 3 0.000564 55667 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 37.237 35.587 8104500 0 8104500 0 0 0 0 0 0 0 0 0 0 0 0 0 55110 1704 49508 463063 366409;366410 366410 2 VDQDDDQDSSSLK Unmodified 1450.606 0.60596101 3414 Q8ND24 RNF214 RING finger protein 214 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 13.847 14.01 2 1.0765E-09 12767 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 116.77 107.33 27712000 0 0 0 2370900 1714500 2706000 1902600 0 1405300 1843300 2870300 2686800 2346400 2556400 5309600 55111 3414 49509 463064;463065;463066;463067;463068;463069;463070;463071;463072;463073;463074 366411;366412;366413;366414;366415;366416;366417;366418;366419;366420 366414 10 VDQDSALHNDLQILK Unmodified 1707.8792 0.87916317 3122 Q7Z7E8 UBE2Q1 Ubiquitin-conjugating enzyme E2 Q1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.87 3.54 4 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 72.768 71.498 2;3 1.2893E-44 90864 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 161.63 106.2 248060000 10757000 124430000 4201400 0 3278600 12253000 4148300 8709400 6398700 10440000 13416000 20033000 8116700 4923900 16954000 55112 3122 49510 463075;463076;463077;463078;463079;463080;463081;463082;463083;463084;463085;463086;463087;463088;463089 366421;366422;366423;366424;366425;366426 366422 5 VDQGTLFELILAANYLDIK Unmodified 2135.1514 0.15142185 1946 P63208 SKP1 S-phase kinase-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 104.12 98.621 3 0.00046586 123526 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.19 43.545 8616100 5698700 2917400 0 0 0 0 0 0 0 0 0 0 0 0 0 55113 1946 49511 463090;463091;463092 366427;366428 366428 2 VDQICHK Unmodified 898.43309 0.43308621 4838 Q9UBE0 SAE1 SUMO-activating enzyme subunit 1;SUMO-activating enzyme subunit 1, N-terminally processed yes yes 0 0 0 By matching By MS/MS 2.67 0.471 1 2 1 2 7.0817 3.6596 2 0.016439 5808 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.01 48.621 493530000 304610 493230000 0 0 0 0 0 0 0 0 0 0 0 0 0 55114 4838 49512 463093;463094;463095 366429;366430 366429 2 VDQIIMAK Unmodified 916.50519 0.50518852 1641 P50990 CCT8 T-complex protein 1 subunit theta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 40.79 40.979 2 0.00622 45659 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 102.71 31.801 443420000 0 0 0 17267000 22679000 49961000 0 27661000 13933000 44762000 54297000 34684000 30531000 44177000 103470000 55115 1641 49513 463096;463097;463098;463099;463100;463101;463102;463103;463104;463105;463106 366431;366432;366433;366434;366435;366436;366437;366438 366435 8 VDQIIMAK Oxidation (M) 932.5001 0.50010314 1641 P50990 CCT8 T-complex protein 1 subunit theta yes yes 0 1 0 By matching By matching By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 29.605 29.881 2 0.046362 31259 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 42.396 13.02 126490000 0 0 0 0 11011000 24985000 0 0 0 0 0 23241000 20236000 15737000 31277000 55116 1641 49513 463107;463108;463109;463110;463111;463112 366439;366440 366439 2 VDQIQEIVTGNPTVIK Unmodified 1752.9622 0.96216452 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.29 6 1 24 2 3 2 2 2 2 2 2 2 2 2 2 2 2 2 80.104 79.054 2;3 1.3194E-54 91529 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 159.08 119.82 8848400000 58636000 5205700000 37170000 177030000 267290000 422850000 211230000 246680000 226720000 472000000 305850000 276830000 208650000 268460000 463240000 55117 1518 49514 463113;463114;463115;463116;463117;463118;463119;463120;463121;463122;463123;463124;463125;463126;463127;463128;463129;463130;463131;463132;463133;463134;463135;463136;463137;463138;463139;463140;463141;463142;463143 366441;366442;366443;366444;366445;366446;366447;366448;366449;366450;366451;366452;366453;366454;366455;366456;366457;366458;366459;366460;366461;366462;366463;366464;366465;366466;366467;366468;366469;366470;366471;366472;366473;366474;366475;366476 366450 30 VDQLNLER Unmodified 985.51926 0.51925868 276 O15357 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.892 39.072 2 0.0068621 43335 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 93.429 30.77 82359000 0 0 0 3729700 4480100 6152100 5066500 5443300 3077800 11279000 8249600 8697000 8445800 5910400 11828000 55118 276 49515 463144;463145;463146;463147;463148;463149;463150;463151;463152;463153;463154;463155 366477;366478;366479;366480;366481 366477 5 VDQSAVGFEYQGK Unmodified 1426.6729 0.67285879 2399 Q14247 CTTN Src substrate cortactin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 49.183 49.409 2 0.0025492 55861 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 58.132 47.867 128950000 0 0 0 0 7735700 10090000 12236000 7218200 0 10780000 19585000 22826000 0 10617000 27863000 55119 2399 49516 463156;463157;463158;463159;463160;463161;463162;463163;463164;463165 366482;366483;366484;366485;366486;366487;366488;366489;366490 366487 9 VDQSILTGESVSVIK Unmodified 1573.8563 0.85630246 1041 P16615;O14983 ATP2A2;ATP2A1 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.495 76.553 2 6.806E-23 88433 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 120.53 89.242 128900000 0 0 0 6040700 10958000 10705000 8466800 9777300 9628600 12647000 12105000 17516000 10295000 8858000 11905000 55120 1041 49517 463166;463167;463168;463169;463170;463171;463172;463173;463174;463175;463176;463177 366491;366492;366493;366494;366495;366496;366497;366498;366499;366500;366501;366502 366496 12 VDQSLHTNTSLDAASEYAK Unmodified 2048.9651 0.96507764 4252 Q9BYT8 NLN Neurolysin, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 4 1 2 1 57.8 52.628 2;3 2.603E-27 67840 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.55 111.97 551340000 0 547670000 3667600 0 0 0 0 0 0 0 0 0 0 0 0 55121 4252 49518 463178;463179;463180;463181 366503;366504;366505 366504 2 VDREQLVQK Acetyl (Protein N-term) 1155.6248 0.62478638 1869 P61981 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 38.622 37.502 2 0.0042396 47010 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.582 44.614 6582800000 264520000 5088000000 51051000 42916000 34033000 52817000 47256000 42058000 30754000 63716000 170440000 176220000 67223000 131400000 320390000 55122 1869 49519 463182;463183;463184;463185;463186;463187;463188;463189;463190;463191;463192;463193;463194;463195;463196;463197 366506;366507;366508;366509;366510;366511;366512;366513;366514;366515;366516;366517;366518;366519;366520;366521;366522;366523 366509 16 VDRSTQDELSTK Unmodified 1377.6736 0.67358707 4900 Q9UHF7 TRPS1 Zinc finger transcription factor Trps1 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 18.161 14.592 3 0.013849 19134 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 50.843 27.467 29745000 0 29745000 0 0 0 0 0 0 0 0 0 0 0 0 0 55123 4900 49520 463198;463199 366524;366525 366524 2 VDRTLVEDLFADK Unmodified 1519.7882 0.7882229 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 82.843 82.994 3 0.047417 95705 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 28.779 15.206 10976000 0 0 0 0 0 0 0 0 0 2164600 0 0 0 0 8811100 55124 528 49521 463200;463201 366526 366526 1 VDSAATSGYEIGNPPDYR Unmodified 1910.8646 0.86463532 1176 P24666 ACP1 Low molecular weight phosphotyrosine protein phosphatase yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 59.6 59.853 2 4.7643E-11 67527 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.552 75.992 24995000 0 0 0 0 0 1589400 0 2692500 0 2806700 5485700 0 0 3051800 9368700 55125 1176 49522 463202;463203;463204;463205;463206;463207 366527;366528;366529 366527 3 VDSDKEDDITELK Unmodified 1505.7097 0.7096978 1685 P52306 RAP1GDS1 Rap1 GTPase-GDP dissociation stimulator 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 38.926 37.704 2;3 2.3873E-29 47964 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 190.1 160.36 554180000 12013000 469800000 0 4777800 2943900 4941800 4826000 4128200 3690900 7523300 7501100 9205100 4728200 4031100 14067000 55126 1685 49523 463208;463209;463210;463211;463212;463213;463214;463215;463216;463217;463218;463219;463220;463221;463222;463223 366530;366531;366532;366533 366530 4 VDSDSSKPPETLTDPPGVCQEK Unmodified 2385.1006 0.10058485 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.55 1 1 4 2 1 1 1 1 52.397 49.872 3 5.694E-26 63848 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.75 106.22 90133000 0 31621000 0 0 0 0 0 27041000 0 0 31470000 0 0 0 0 55127 5216 49524 463224;463225;463226;463227;463228;463229 366534;366535;366536;366537;366538;366539;366540 366536 7 VDSETNIEASK Unmodified 1191.5619 0.56191135 4254 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 18.822 19.033 2 0.0012794 18983 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.841 36.03 8474700 0 0 0 0 1444500 0 1583500 0 0 0 1876400 3570300 0 0 0 55128 4254 49525 463230;463231;463232;463233;463234;463235 366541;366542;366543;366544;366545 366545 5 VDSEVLSAK Unmodified 946.49713 0.49712625 4001 Q96T76 MMS19 MMS19 nucleotide excision repair protein homolog yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 8.64 2.9 1 1 9 2 1 1 1 1 1 1 1 1 1 29.281 28.59 2 0.00070156 35632 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.29 78.391 300780000 0 205730000 0 5826700 7876900 12665000 0 6589200 6161200 14708000 13668000 0 10972000 0 16581000 55129 4001 49526 463236;463237;463238;463239;463240;463241;463242;463243;463244;463245;463246 366546;366547;366548;366549;366550;366551;366552;366553 366546 8 VDSFHESTEGK Unmodified 1234.5466 0.54659564 3579 Q8WWY3 PRPF31 U4/U6 small nuclear ribonucleoprotein Prp31 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 1 2 2 2 1 2 2 2 2 2 13.819 13.991 2;3 6.3751E-90 12736 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 208.63 143.38 674310000 0 0 0 45099000 58318000 8352400 52957000 32810000 30596000 18393000 89459000 97285000 85304000 68168000 87568000 55130 3579 49527 463247;463248;463249;463250;463251;463252;463253;463254;463255;463256;463257;463258;463259;463260;463261;463262;463263;463264;463265;463266;463267;463268 366554;366555;366556;366557;366558;366559;366560;366561;366562;366563;366564;366565;366566;366567;366568;366569;366570 366559 10 VDSGYRVHEELR Unmodified 1458.7215 0.72154031 2441 Q14697 GANAB Neutral alpha-glucosidase AB yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 28.619 28.867 3 0.0018415 31753 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 52.555 32.815 285840000 0 0 0 11726000 0 8308500 7629600 15033000 9017900 16854000 34129000 53568000 28749000 27635000 73191000 55131 2441 49528 463269;463270;463271;463272;463273;463274;463275;463276;463277;463278;463279 366571;366572;366573;366574;366575;366576 366575 6 VDSLLENLEK Unmodified 1158.6132 0.61321864 851 P07910;P0DMR1;O60812;B7ZW38;B2RXH8 HNRNPC;HNRNPCL4;HNRNPCL1;HNRNPCL3;HNRNPCL2 Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 3 1 78.417 73.653 2 8.8475E-06 92824 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.66 62.031 4179900000 210510000 3899400000 69998000 0 0 0 0 0 0 0 0 0 0 0 0 55132 851 49529 463280;463281;463282;463283;463284 366577;366578;366579;366580;366581;366582;366583 366578 5 VDSLLHGTFSAK Unmodified 1273.6667 0.6666512 4936 Q9UJA5 TRMT6 tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 5 2 1 2 63.294 57.283 2;3 8.5723E-09 77087 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 136.86 103.6 229870000 171630000 26029000 32205000 0 0 0 0 0 0 0 0 0 0 0 0 55133 4936 49530 463285;463286;463287;463288;463289 366584;366585;366586;366587;366588 366586 1 VDSLNDEINFLK Unmodified 1405.7089 0.70890994 77 CON__P19013;P19013 KRT4 Keratin, type II cytoskeletal 4 yes no 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 82.352 81.845 2 5.2107E-82 94571 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 204.07 118.39 + 455180000 0 45699000 0 5058600 796060 0 75178000 278180000 7590600 0 0 15073000 23405000 4200500 0 55134 77 49531 463290;463291;463292;463293;463294;463295;463296;463297;463298 366589;366590;366591;366592;366593;366594;366595;366596 366590 8 VDSLTDEVSFLR Unmodified 1379.6933 0.69325988 2056;83 CON__Q01546;Q01546 KRT76 Keratin, type II cytoskeletal 2 oral no no 0 0 0 By MS/MS 10 0 1 1 83.029 82.632 2 2.7405E-05 96017 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 96.015 77.703 + 4616200 0 0 0 4616200 0 0 0 0 0 0 0 0 0 0 0 55135 83;2056 49532 463299 366597 366597 1 VDSPDVK Unmodified 758.38103 0.38103386 3102 Q7Z4V5 HDGFRP2 Hepatoma-derived growth factor-related protein 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 11.371 11.572 2 0.026713 10340 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 78.178 31.133 19803000 0 0 0 2767100 0 290470 0 0 0 0 2793800 6340500 3216800 0 4394000 55136 3102 49533 463300;463301;463302;463303;463304;463305 366598;366599;366600 366600 3 VDSPSHGLVTSSLCIPSPAR Unmodified 2079.0419 0.041888175 4872 Q9UER7 DAXX Death domain-associated protein 6 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 75.198 75.409 3 0.0045213 87103 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 28.748 25.107 30951000 0 0 0 0 0 0 0 8529100 0 0 0 0 0 5425100 16997000 55137 4872 49534 463306;463307;463308;463309 366601;366602;366603 366602 2 VDSPTVNTTLR Unmodified 1201.6303 0.63026569 4321 Q9H0B6 KLC2 Kinesin light chain 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.207 42.384 2 2.7627E-05 46190 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 119.68 99.351 215360000 0 0 0 12831000 13963000 18782000 14754000 16850000 10320000 19437000 24312000 24698000 25920000 11032000 22458000 55138 4321 49535 463310;463311;463312;463313;463314;463315;463316;463317;463318;463319;463320;463321 366604;366605;366606;366607;366608;366609;366610;366611;366612;366613;366614;366615;366616 366612 13 VDSPTVTTTLK Unmodified 1160.6289 0.62886871 2143 Q07866 KLC1 Kinesin light chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44.1 43.294 2 0.0001441 48416 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 125.48 71.323 406230000 7145900 174730000 0 9491600 12282000 19332000 15025000 13021000 12557000 17249000 24562000 27460000 18749000 14517000 40104000 55139 2143 49536 463322;463323;463324;463325;463326;463327;463328;463329;463330;463331;463332;463333;463334;463335 366617;366618;366619;366620;366621;366622;366623;366624;366625;366626;366627;366628;366629;366630;366631 366625 13 VDSPVIFDLEDLDSETDVSK Unmodified 2222.0478 0.047804218 3089 Q7Z401 DENND4A C-myc promoter-binding protein yes yes 0 0 0 By MS/MS 2 0 1 1 96.866 92.044 2 5.4463E-18 114066 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.63 108.95 14690000 0 14690000 0 0 0 0 0 0 0 0 0 0 0 0 0 55140 3089 49537 463336 366632 366632 1 VDSQASITQDSDSIK Unmodified 1592.753 0.7529596 2891 Q6KC79 NIPBL Nipped-B-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 2 1 1 1 38.513 38.386 2 0.0013746 42351 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 52.693 36.555 15772000 0 0 0 2268500 2685000 4265600 0 4150400 2402800 0 0 0 0 0 0 55141 2891 49538 463337;463338;463339;463340;463341;463342;463343 366633;366634;366635;366636;366637;366638 366635 6 VDSQYPPVQR Unmodified 1187.5935 0.59348625 1600 P49790 NUP153 Nuclear pore complex protein Nup153 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.359 30.548 2 0.016562 32639 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 61.691 39.841 207660000 0 0 0 11535000 10568000 14348000 13563000 15125000 13899000 16748000 18956000 28266000 25656000 17087000 21914000 55142 1600 49539 463344;463345;463346;463347;463348;463349;463350;463351;463352;463353;463354;463355 366639;366640;366641;366642;366643;366644;366645 366644 4 VDSTTCLFPVEEK Unmodified 1523.7178 0.71776007 2125 Q06210 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 71.531 71.134 2 2.6428E-13 82645 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 138.71 112.77 182150000 0 33205000 0 6493500 8277100 10477000 0 10042000 0 11872000 16497000 23536000 12798000 17867000 31082000 55143 2125 49540 463356;463357;463358;463359;463360;463361;463362;463363;463364;463365;463366 366646;366647;366648;366649;366650;366651;366652;366653;366654;366655;366656 366655 11 VDSVPDVSPAPSPAGIPHGSQTIGNHFQR Unmodified 2966.4635 0.46348172 2852 Q68CP9 ARID2 AT-rich interactive domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.643 69.718 4 1.3115E-16 79728 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.3 51.956 124620000 0 0 0 2795400 3950400 10910000 5773700 7766500 5795100 13180000 10240000 18263000 11429000 11412000 23102000 55144 2852 49541 463367;463368;463369;463370;463371;463372;463373;463374;463375;463376;463377;463378 366657;366658;366659;366660;366661;366662;366663;366664;366665;366666;366667;366668 366660 11 VDSVRNDHGGTVK Unmodified 1382.6902 0.69024019 3994 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6.748 6.4355 3 3.2661E-10 4524 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 94.688 76.879 346280000 57876000 0 73730000 10002000 11949000 13584000 15803000 17036000 17385000 17000000 25221000 21263000 22060000 19204000 24170000 55145 3994 49542 463379;463380;463381;463382;463383;463384;463385;463386;463387;463388;463389;463390;463391;463392 366669;366670;366671;366672;366673;366674;366675;366676;366677;366678;366679;366680;366681 366669 13 VDTEDIEK Unmodified 947.44476 0.44475633 4838 Q9UBE0 SAE1 SUMO-activating enzyme subunit 1;SUMO-activating enzyme subunit 1, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 21.381 21.186 2 0.030702 20785 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.37 9.3543 597890000 45226000 0 0 24470000 23911000 27802000 29033000 22083000 19013000 42590000 75376000 88695000 62044000 58090000 79554000 55146 4838 49543 463393;463394;463395;463396;463397;463398;463399;463400;463401;463402;463403;463404;463405 366682;366683 366682 2 VDTGPREDLIK Unmodified 1241.6616 0.66156582 106 Q9C075;CON__Q9C075 KRT23 Keratin, type I cytoskeletal 23 yes no 0 0 1 By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 37.291 37.403 3 0.030035 41996 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 48.741 16.898 + 374320000 0 0 0 111400000 23919000 21050000 19147000 42042000 16966000 39655000 21669000 46146000 32325000 0 0 55147 106 49544 463406;463407;463408;463409;463410;463411;463412;463413;463414;463415 366684 366684 0 VDTGVILEEGELK Unmodified 1400.7399 0.73987572 4818 Q9P2I0 CPSF2 Cleavage and polyadenylation specificity factor subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.694 73.76 2 5.1438E-08 85337 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 120.77 95.916 147310000 0 0 0 5709400 6218600 13383000 9347300 6343300 10807000 14693000 18236000 17339000 13305000 13471000 18461000 55148 4818 49545 463416;463417;463418;463419;463420;463421;463422;463423;463424;463425;463426;463427 366685;366686;366687;366688;366689;366690;366691;366692;366693;366694;366695;366696 366693 12 VDTHIHASSCMNQK Oxidation (M) 1642.7192 0.71917383 2053 Q01433 AMPD2 AMP deaminase 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 15.236 11.983 3 8.9071E-15 17317 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 115.06 111.55 182450000 103740000 33443000 45265000 0 0 0 0 0 0 0 0 0 0 0 0 55149 2053 49546 463428;463429;463430 366697;366698;366699;366700 366699 3336 3 VDTHIHASSCMNQK Unmodified 1626.7243 0.72425921 2053 Q01433 AMPD2 AMP deaminase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 6 2 2 2 26.047 21.844 3;4 6.1353E-19 27293 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 113.35 90.468 309710000 236670000 38390000 34644000 0 0 0 0 0 0 0 0 0 0 0 0 55150 2053 49546 463431;463432;463433;463434;463435;463436 366701;366702;366703;366704;366705;366706;366707;366708 366705 6 VDTILEFSQNMNTK Oxidation (M) 1654.7872 0.78723662 237 O14980 XPO1 Exportin-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 69.829 69.871 2 8.817E-13 80570 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 106.29 97.709 89201000 0 0 0 4250000 5646600 12797000 7420400 5883000 5044900 10443000 9312900 14225000 8278800 5899100 0 55151 237 49547 463437;463438;463439;463440;463441;463442;463443;463444;463445;463446;463447 366709;366710;366711;366712;366713;366714;366715;366716;366717;366718;366719 366716 324 11 VDTILEFSQNMNTK Unmodified 1638.7923 0.792322 237 O14980 XPO1 Exportin-1 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 78.783 78.685 2 0.011176 90972 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 53.211 44.906 12563000 0 0 0 0 2459400 0 0 0 0 10103000 0 0 0 0 0 55152 237 49547 463448;463449 366720 366720 1 VDTLPYVPEPIK Unmodified 1369.7493 0.74931819 3601 Q8WYP5 AHCTF1 Protein ELYS yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 79.954 79.645 2 0.0027243 91261 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 68.557 60.632 205360000 0 101350000 0 6326100 5775800 7584600 6681000 6404400 5375000 10045000 11903000 12958000 8601100 8187000 14173000 55153 3601 49548 463450;463451;463452;463453;463454;463455;463456;463457;463458;463459;463460;463461;463462 366721;366722;366723;366724;366725;366726;366727;366728;366729;366730;366731;366732;366733;366734;366735 366730 15 VDTLTGEVNFLK Unmodified 1334.7082 0.70818166 103 CON__Q7Z794;Q7Z794 KRT77 Keratin, type II cytoskeletal 1b yes no 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.721 79.779 2 1.8602E-14 92140 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 154.01 119.62 + 373290000 0 0 0 61445000 17025000 20201000 19277000 22306000 13747000 56387000 18887000 84743000 21178000 21191000 16900000 55154 103 49549 463463;463464;463465;463466;463467;463468;463469;463470;463471;463472;463473;463474 366736;366737;366738;366739;366740;366741;366742;366743;366744;366745;366746 366736 8 VDTMIVQAISLLDDLDK Unmodified 1887.9863 0.98633036 5125 Q9Y2X3 NOP58 Nucleolar protein 58 yes yes 0 0 0 By MS/MS 2 0 2 2 104.15 96.018 2;3 0.00035339 123377 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 92.856 84.127 6199400 6199400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55155 5125 49550 463475;463476 366747;366748;366749 366747 3 VDTNAPDLSLEGPEGK Unmodified 1640.7893 0.78934511 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62.956 62.023 2 1.5308E-27 71091 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 132.59 117.05 580880000 3526800 34095000 0 31929000 25756000 31959000 43557000 49841000 30241000 41589000 37477000 68828000 54967000 45463000 81652000 55156 2172 49551 463477;463478;463479;463480;463481;463482;463483;463484;463485;463486;463487;463488;463489;463490 366750;366751;366752;366753;366754;366755;366756;366757;366758;366759;366760;366761;366762;366763 366757 14 VDTRYTTTQQVVK Unmodified 1537.81 0.81002097 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 36.655 31.823 3 0.00012421 42076 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.631 78.556 113300000 15603000 78215000 19483000 0 0 0 0 0 0 0 0 0 0 0 0 55157 2775 49552 463491;463492;463493;463494 366764;366765;366766;366767 366765 4 VDTSVHYNIPELQSSSR Unmodified 1930.9385 0.93846896 2434 Q14687 GSE1 Genetic suppressor element 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.032 67.112 3 0.006286 76286 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.621 30.985 66783000 0 0 0 2010100 3156300 5557900 4160600 4612300 4590000 5621700 5125200 9652100 4907400 7632600 9756700 55158 2434 49553 463495;463496;463497;463498;463499;463500;463501;463502;463503;463504;463505;463506 366768 366768 0 VDTYVEFPLR Unmodified 1237.6343 0.63428844 5285 Q9Y6I4 USP3 Ubiquitin carboxyl-terminal hydrolase 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 79.337 79.417 2 0.001289 90979 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 117.89 77.538 8881600 0 0 0 0 0 0 0 0 0 0 0 0 8881600 0 0 55159 5285 49554 463507;463508;463509;463510;463511;463512;463513;463514 366769;366770;366771;366772;366773;366774;366775;366776 366773 8 VDVADQAQDK Unmodified 1087.5146 0.51456723 1166 P23588 EIF4B Eukaryotic translation initiation factor 4B yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 15.88 16.169 2 0.012397 14928 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.549 29.229 33960000 0 0 0 0 1765100 0 0 1454000 0 0 6105300 8666400 0 6651700 9317700 55160 1166 49555 463515;463516;463517;463518;463519;463520 366777;366778 366777 2 VDVASVIVTK Unmodified 1029.607 0.60701105 1826 P61011 SRP54 Signal recognition particle 54 kDa protein yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.53 2.94 1 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64.752 63.915 2 0.0017308 73212 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 89.029 55.633 903900000 510680 21223000 11999000 0 61130000 71897000 72802000 65572000 57183000 82399000 99741000 88122000 82907000 66867000 121540000 55161 1826 49556 463521;463522;463523;463524;463525;463526;463527;463528;463529;463530;463531;463532;463533;463534;463535 366779;366780;366781;366782;366783;366784;366785;366786;366787;366788;366789;366790;366791;366792;366793 366780 14 VDVCSTETLK Unmodified 1150.554 0.5539892 2810 Q5VT52 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 36.37 36.309 2 0.0063798 39989 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 65.157 38.773 111540000 0 0 0 10709000 14294000 0 0 27765000 30012000 0 0 0 28758000 0 0 55162 2810 49557 463536;463537;463538;463539;463540 366794;366795;366796;366797 366795 3 VDVDEYDENK Unmodified 1224.5146 0.51462681 289 O15511 ARPC5 Actin-related protein 2/3 complex subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.47 3.93 3 2 12 3 2 1 1 1 1 1 1 1 1 1 1 1 1 43.693 43.879 2 9.549E-13 92940 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 182.29 175.4 464670000 90869000 75267000 0 17928000 16434000 20859000 15225000 16146000 14677000 22818000 28191000 39432000 21834000 24593000 60399000 55163 289 49558 463541;463542;463543;463544;463545;463546;463547;463548;463549;463550;463551;463552;463553;463554;463555;463556;463557 366798;366799;366800;366801;366802;366803;366804;366805;366806;366807;366808;366809;366810;366811;366812;366813;366814 366806 14 VDVDIPDVNIEGPDAK Unmodified 1694.8363 0.8362953 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 80.211 80.226 2 0.0012957 93186 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 71.806 5.7834 87281000 0 0 0 6035400 0 14341000 0 0 0 0 15876000 0 15680000 0 35349000 55164 2172 49559 463558;463559;463560;463561;463562 366815;366816;366817 366816 3 VDVDVPDVNIEGPDAK Unmodified 1680.8206 0.82064524 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 4 2 24 2 3 1 2 2 2 2 2 2 2 2 2 2 2 2 76.639 75.767 2;3 1.1775E-10 87880 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 103.88 95.576 1035100000 54938000 205760000 3256600 36136000 42108000 50661000 48662000 70762000 55496000 64236000 62582000 93669000 60719000 65186000 120900000 55165 2172 49560 463563;463564;463565;463566;463567;463568;463569;463570;463571;463572;463573;463574;463575;463576;463577;463578;463579;463580;463581;463582;463583;463584;463585;463586;463587;463588;463589;463590;463591;463592 366818;366819;366820;366821;366822;366823;366824;366825;366826;366827;366828;366829;366830;366831;366832;366833;366834;366835;366836;366837;366838;366839;366840 366819 21 VDVEALENSAGATYIR Unmodified 1706.8475 0.84752869 578 O76094 SRP72 Signal recognition particle subunit SRP72 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.82 77.878 2 2.3533E-50 90382 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 170.04 144.6 129230000 0 0 0 4168700 8523100 9514900 7855700 12223000 8214400 19463000 14204000 17386000 7163500 6322300 14190000 55166 578 49561 463593;463594;463595;463596;463597;463598;463599;463600;463601;463602;463603;463604 366841;366842;366843;366844;366845;366846;366847;366848;366849 366846 9 VDVEALENSAGATYIRK Unmodified 1834.9425 0.94249171 578 O76094 SRP72 Signal recognition particle subunit SRP72 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 4 22 1 1 2 1 1 2 2 2 2 2 2 2 2 2 2 72.539 71.923 2;3 2.7288E-52 90076 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.81 130.47 618940000 30538000 58731000 46709000 12351000 21372000 42915000 33124000 48575000 36929000 62396000 54957000 51112000 29114000 33672000 56445000 55167 578 49562 463605;463606;463607;463608;463609;463610;463611;463612;463613;463614;463615;463616;463617;463618;463619;463620;463621;463622;463623;463624;463625;463626;463627;463628;463629;463630 366850;366851;366852;366853;366854;366855;366856;366857;366858;366859;366860;366861;366862;366863;366864;366865;366866;366867;366868;366869;366870 366854 17 VDVECPDVNIEGPEGK Unmodified 1755.7985 0.79852959 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 64.303 63.749 2 2.3114E-21 73392 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 114.82 108.16 352400000 6130700 0 0 16922000 18874000 21920000 19175000 28670000 31174000 24313000 21186000 40372000 45417000 33121000 45122000 55168 2172 49563 463631;463632;463633;463634;463635;463636;463637;463638;463639;463640;463641;463642;463643 366871;366872;366873;366874;366875;366876;366877;366878;366879;366880;366881;366882;366883 366883 13 VDVEEEFFALRK Unmodified 1480.7562 0.75619449 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 81.499 80.835 3 0.0019192 93349 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.013 46.941 38632000 7985100 0 0 930530 0 2553100 1130000 2129300 3296300 3592700 2300100 0 1707000 2221000 10787000 55169 1492 49564 463644;463645;463646;463647;463648;463649;463650;463651;463652;463653;463654 366884;366885;366886;366887 366884 4 VDVEGPDVNIEGPEGK Unmodified 1652.7893 0.78934511 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 63.644 62.36 2 4.7083E-40 77473 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.08 111.88 485820000 12625000 45855000 0 29589000 25611000 25391000 30946000 0 32099000 43893000 43216000 50599000 59986000 34448000 51556000 55170 2172 49565 463655;463656;463657;463658;463659;463660;463661;463662;463663;463664;463665;463666;463667;463668 366888;366889;366890;366891;366892;366893;366894;366895 366889 8 VDVETELQTYK Unmodified 1323.6558 0.65581174 3582 Q8WXA3 RUFY2 RUN and FYVE domain-containing protein 2 yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 8.7279 5.7269 3 0.042478 9855 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 26.786 4.0658 42571000 35383000 0 7188400 0 0 0 0 0 0 0 0 0 0 0 0 55171 3582 49566 463669;463670 366896 366896 1 VDVEVPDVSLEGPEGK Unmodified 1667.8254 0.82539626 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.61 2.99 4 1 23 1 3 1 1 2 2 2 2 2 2 2 2 2 2 2 78.648 78.024 2;3 1.1E-20 90048 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 136.27 128.2 2349000000 56620000 469080000 2140400 63218000 96376000 109020000 117820000 167720000 134120000 149760000 155070000 227760000 164240000 194080000 241980000 55172 2172 49567 463671;463672;463673;463674;463675;463676;463677;463678;463679;463680;463681;463682;463683;463684;463685;463686;463687;463688;463689;463690;463691;463692;463693;463694;463695;463696;463697;463698 366897;366898;366899;366900;366901;366902;366903;366904;366905;366906;366907;366908;366909;366910;366911;366912;366913;366914;366915;366916;366917;366918;366919 366903 23 VDVFREDLCTK Unmodified 1380.6708 0.6707503 2127 Q06323 PSME1 Proteasome activator complex subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 3 2 1 1 1 1 1 1 1 1 1 1 1 1 56.161 54.834 2;3 0.00038693 62044 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 67.385 53.127 1208300000 0 209300000 355420000 43193000 16499000 53442000 32012000 24533000 24072000 54133000 83725000 76699000 35628000 49429000 150260000 55173 2127 49568 463699;463700;463701;463702;463703;463704;463705;463706;463707;463708;463709;463710;463711;463712;463713;463714;463715 366920;366921;366922;366923;366924;366925;366926;366927;366928;366929;366930;366931;366932;366933;366934;366935;366936;366937;366938 366930 16 VDVFTNLGYR Unmodified 1182.6033 0.60332266 3177 Q86W42 THOC6 THO complex subunit 6 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 75.53 75.579 2 0.010808 86612 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.27 46.484 66297000 0 0 0 1951300 3821600 7621000 3952200 4314500 0 7152000 6040600 7082500 5743500 5997500 12620000 55174 3177 49569 463716;463717;463718;463719;463720;463721;463722;463723;463724;463725;463726 366939;366940;366941;366942;366943;366944 366941 6 VDVGGSEPASLSYLSFEGATK Unmodified 2113.0215 0.021529888 4575 Q9NQT5 EXOSC3 Exosome complex component RRP40 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 4.83 3.67 3 1 2 3 1 1 1 85.791 83.281 2;3 1.3587E-37 102919 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 144.33 136.23 206190000 0 184540000 1431100 0 0 0 0 0 0 9245600 0 10972000 0 0 0 55175 4575 49570 463727;463728;463729;463730;463731;463732 366945;366946;366947 366945 3 VDVGKDQEFTVK Unmodified 1363.6983 0.69834526 1124 P21333 FLNA Filamin-A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 41.05 41.565 3 0.0038096 46357 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 53.557 34.458 70919000 0 0 0 0 0 0 0 0 0 0 14006000 22759000 9212400 7326300 17615000 55176 1124 49571 463733;463734;463735;463736;463737 366948;366949;366950 366949 2 VDVGQQPLR Unmodified 1010.5509 0.55089316 4 A0FGR8 ESYT2 Extended synaptotagmin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 33.314 33.519 2 0.012712 35611 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 60.895 39.214 62897000 0 0 0 4821700 5699400 0 5516200 0 4904600 5309800 6770500 7300100 6289500 7214900 9070600 55177 4 49572 463738;463739;463740;463741;463742;463743;463744;463745;463746;463747 366951;366952;366953;366954;366955;366956 366953 6 VDVGQQPLRINGVK Unmodified 1521.8627 0.86272524 4 A0FGR8 ESYT2 Extended synaptotagmin-2 yes yes 0 0 1 By MS/MS 2 0 1 1 64.404 56.125 3 0.024959 75638 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 37.156 24.019 7177700 7177700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55178 4 49573 463748 366957 366957 1 VDVIAGSSK Unmodified 874.476 0.47599688 441 O60885 BRD4 Bromodomain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.53 2.94 1 2 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 22.215 21.524 2 0.00070435 26580 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.05 75.097 347540000 425760 146410000 0 11433000 7973800 14546000 13919000 11728000 12496000 17308000 19911000 23603000 20922000 17959000 28912000 55179 441 49574 463749;463750;463751;463752;463753;463754;463755;463756;463757;463758;463759;463760;463761;463762;463763 366958;366959;366960;366961;366962;366963;366964;366965;366966;366967;366968 366961 8 VDVIFCDK Unmodified 994.47937 0.4793677 3702 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 56.095 56.044 2 0.02509 63774 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 58.981 31.843 25596000 0 0 0 6732800 0 7737000 0 4731800 0 0 0 0 6394500 0 0 55180 3702 49575 463764;463765;463766;463767 366969;366970 366970 2 VDVINFAQNK Unmodified 1146.6033 0.60332266 242 O15027 SEC16A Protein transport protein Sec16A yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 62.735 62.062 2 0.0014004 70953 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 105.57 82.828 388590000 0 105680000 0 14868000 15826000 26669000 20690000 17574000 16365000 24989000 25131000 32141000 28796000 22643000 37226000 55181 242 49576 463768;463769;463770;463771;463772;463773;463774;463775;463776;463777;463778;463779;463780;463781 366971;366972;366973;366974;366975;366976;366977;366978;366979 366971 6 VDVNAPDVQAPDWHLK Unmodified 1802.8951 0.89514758 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 75.332 74.844 3 4.7939E-07 85951 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.279 66.709 684310000 0 220080000 5490900 10425000 0 38602000 18558000 45552000 33130000 42241000 40495000 47805000 34971000 39246000 107720000 55182 2172 49577 463782;463783;463784;463785;463786;463787;463788;463789;463790;463791;463792;463793;463794 366980;366981;366982;366983;366984;366985;366986;366987;366988;366989;366990;366991;366992;366993;366994 366985 14 VDVSAPDVEAHGPEWNLK Unmodified 1961.9483 0.94830537 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 73.87 73.336 3 1.4864E-26 84915 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 108.56 92.739 703210000 0 305150000 0 13099000 18047000 34565000 15850000 39187000 28877000 37480000 28711000 56451000 35976000 35429000 54392000 55183 2172 49578 463795;463796;463797;463798;463799;463800;463801;463802;463803;463804;463805;463806;463807;463808 366995;366996;366997;366998;366999;367000;367001;367002;367003;367004;367005;367006;367007;367008;367009;367010;367011 367008 17 VDVSAPDVEMQGPDWNLK Oxidation (M) 2014.9306 0.93060639 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 76.702 76.169 2 8.9561E-81 92774 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 188.15 175.88 235110000 0 89491000 0 6884600 8910600 9252200 8716300 12706000 11372000 14740000 12464000 13923000 15794000 12196000 18661000 55184 2172 49579 463809;463810;463811;463812;463813;463814;463815;463816;463817;463818;463819;463820;463821;463822 367012;367013;367014;367015;367016;367017;367018;367019;367020;367021;367022;367023;367024 367015 3541 13 VDVSAPDVEMQGPDWNLK Unmodified 1998.9357 0.93569177 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS 2 0 1 1 85.313 80.569 2 4.2369E-05 100056 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.33 111.97 204020000 0 204020000 0 0 0 0 0 0 0 0 0 0 0 0 0 55185 2172 49579 463823 367025 367025 0 VDVSCEPLEGVEK Unmodified 1459.6865 0.68645994 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching 10 0 5 1 1 1 1 1 57.368 57.539 2 0.0029362 64613 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 56.225 47.712 40354000 0 0 0 0 7692300 0 0 0 0 0 2123400 0 0 11104000 19435000 55186 2203 49580 463824;463825;463826;463827;463828 367026;367027;367028 367027 3 VDVSLIER Unmodified 929.5182 0.51819605 2805 Q5VIR6 VPS53 Vacuolar protein sorting-associated protein 53 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 57.317 57.437 2 0.013044 64257 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.248 45.414 112610000 0 0 0 5946100 10221000 10066000 9265300 10520000 6053600 10510000 9394500 11087000 8958100 8658000 11928000 55187 2805 49581 463829;463830;463831;463832;463833;463834;463835;463836;463837;463838;463839;463840 367029;367030;367031;367032;367033;367034;367035;367036;367037 367032 8 VDVSSVPDHLK Unmodified 1194.6245 0.62445203 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 46.11 46.278 2;3 0.00036034 52010 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 98.044 70.79 799630000 0 0 0 43295000 52085000 50850000 58945000 77013000 50073000 78584000 74073000 107940000 70750000 73928000 62090000 55188 3023 49582 463841;463842;463843;463844;463845;463846;463847;463848;463849;463850;463851;463852;463853;463854;463855;463856;463857;463858;463859;463860;463861;463862;463863;463864 367038;367039;367040;367041;367042;367043;367044;367045;367046;367047;367048;367049;367050;367051;367052;367053;367054;367055;367056;367057;367058;367059;367060;367061 367055 16 VDVTEQPGLSGR Unmodified 1256.6361 0.63607935 4380 Q9H3N1 TMX1 Thioredoxin-related transmembrane protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 39.744 39.908 2 0.0015933 43896 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 66.603 37.545 36547000 0 0 0 0 3520800 5354200 3878800 3898300 0 5564500 5917800 8412700 0 0 0 55189 4380 49583 463865;463866;463867;463868;463869;463870;463871 367062;367063;367064 367064 3 VDWLTEK Unmodified 889.45453 0.45453316 1816;1400;2396 P38919;P60842;Q14240 EIF4A3;EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed;Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 54.906 53.435 2 0.023193 66010 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 105.39 66.369 3557800000 98936000 2240400000 63579000 0 35564000 157290000 59909000 0 63017000 136120000 124180000 108830000 80239000 122830000 266910000 55190 1400;1816;2396 49584 463872;463873;463874;463875;463876;463877;463878;463879;463880;463881;463882;463883;463884;463885 367065;367066;367067;367068;367069 367068 5 VDYGSPDHTK Unmodified 1117.504 0.50400254 4711 Q9NX01 TXNL4B Thioredoxin-like protein 4B yes yes 0 0 0 By MS/MS 2 0 1 1 13.547 10.232 2 0.0054175 13891 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.744 76.53 17486000 0 17486000 0 0 0 0 0 0 0 0 0 0 0 0 0 55191 4711 49585 463886 367070;367071 367071 2 VDYYEVLGVQR Unmodified 1339.6772 0.67721588 474 O75190 DNAJB6 DnaJ homolog subfamily B member 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.645 76.702 2 0.0029449 88544 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 65.347 49.732 120970000 0 0 0 4587800 5199700 8102500 7984100 8602900 7502500 14678000 10268000 14898000 9193400 8726900 21222000 55192 474 49586 463887;463888;463889;463890;463891;463892;463893;463894;463895;463896;463897;463898 367072;367073;367074;367075;367076;367077;367078;367079;367080;367081;367082;367083;367084;367085 367077 14 VEAAGPGGESEPTGSGGTLAHTPR Unmodified 2234.0564 0.056352265 5015 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 38.845 39.145 3 4.7993E-08 43016 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 52.061 46.851 37790000 0 0 0 0 0 3432100 4108700 0 0 6051500 7350500 6158400 6454600 4234400 0 55193 5015 49587 463899;463900;463901;463902;463903;463904;463905 367086;367087;367088;367089;367090;367091;367092;367093 367093 8 VEAAIALQVLISNQEK Unmodified 1724.9672 0.96724989 649 O95373 IPO7 Importin-7 yes yes 0 0 0 By MS/MS By matching 2.67 0.471 1 2 2 1 95.959 90.995 3 0.002156 114518 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 38.261 28.161 33684000 33298000 386860 0 0 0 0 0 0 0 0 0 0 0 0 0 55194 649 49588 463906;463907;463908 367094;367095;367096 367096 3 VEAAPPGPGPLRR Acetyl (Protein N-term) 1357.7466 0.74663285 4801 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 yes yes 1 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 57.836 57.931 2 6.59E-05 66334 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 82.749 63.478 89697000 0 0 0 10508000 9049700 11326000 12555000 8391500 0 0 12497000 9021900 0 7505800 8840500 55195 4801 49589 463909;463910;463911;463912;463913;463914;463915;463916;463917;463918;463919;463920 367097;367098;367099;367100;367101;367102;367103;367104;367105;367106;367107;367108 367108 11 VEADGSFPSMQGDLK Unmodified 1579.7188 0.7188227 3226 Q8IVF2 AHNAK2 Protein AHNAK2 yes yes 0 0 0 By MS/MS 10 0 1 1 64.689 65.133 2 0.0063128 74464 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 54.7 29.041 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55196 3226 49590 463921 367109 367109 1 VEADLSLPSMQGDLK Oxidation (M) 1617.792 0.79198764 3226 Q8IVF2 AHNAK2 Protein AHNAK2 yes no 0 1 0 By MS/MS 2 0 1 1 71.883 66.156 2 0.0012841 83998 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.241 6.7299 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55197 3226 49591 463922 367110 367110 4844 1 VEADLSLPSMQGDLK Unmodified 1601.7971 0.79707302 3226 Q8IVF2 AHNAK2 Protein AHNAK2 yes no 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 79.267 79.289 2 0.0013365 90799 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 54.259 14.635 12447000 0 0 0 0 1552700 0 0 0 0 0 0 0 0 4576600 6318100 55198 3226 49591 463923;463924;463925 367111;367112 367112 2 VEADMSLPSMQGDLK Unmodified 1619.7535 0.75349365 3226 Q8IVF2 AHNAK2 Protein AHNAK2 yes no 0 0 0 By MS/MS 2 0 1 1 79.07 74.334 2 4.1099E-10 92637 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.99 108.48 43728000 0 43728000 0 0 0 0 0 0 0 0 0 0 0 0 0 55199 3226 49592 463926 367113;367114 367114 2 VEADRPGK Acetyl (Protein N-term) 912.46649 0.46649483 1395 P38159;Q96E39;O75526 RBMX;RBMXL1;RBMXL2 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1;RNA-binding motif protein, X-linked-like-2 yes no 1 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 16.931 16.01 2 0.0070302 18476 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 102 69.86 894080000 37907000 562870000 3694100 23215000 19592000 24338000 27382000 19675000 25516000 30630000 0 40551000 0 31576000 47127000 55200 1395 49593 463927;463928;463929;463930;463931;463932;463933;463934;463935;463936;463937;463938;463939;463940 367115;367116;367117;367118;367119;367120;367121;367122;367123;367124;367125 367119 5 VEADVSLPSMQGDLK Unmodified 1587.7814 0.78142296 3226 Q8IVF2 AHNAK2 Protein AHNAK2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 75.36 75.013 2 1.1042E-09 86668 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 93.011 68.173 391100000 0 252540000 0 0 10781000 8003600 9524600 14594000 8898000 15848000 17773000 25657000 10381000 17103000 0 55201 3226 49594 463941;463942;463943;463944;463945;463946;463947;463948;463949;463950;463951;463952 367126;367127;367128;367129;367130;367131;367132;367133;367134;367135;367136;367137 367132 12 VEADVSLPSMQGDLK Oxidation (M) 1603.7763 0.77633758 3226 Q8IVF2 AHNAK2 Protein AHNAK2 yes no 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 1 1 1 1 1 1 1 1 1 1 1 1 1 60.297 59.544 2 2.0804E-14 67897 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 100.09 80.843 154190000 430820 25658000 0 8088800 9816500 0 14830000 7790500 11416000 13766000 11932000 15943000 13157000 10906000 10457000 55202 3226 49594 463953;463954;463955;463956;463957;463958;463959;463960;463961;463962;463963;463964;463965 367138;367139;367140;367141;367142;367143;367144;367145;367146;367147;367148;367149;367150;367151;367152 367140 4845 15 VEADVSLSSMQGDLK Unmodified 1577.7607 0.76068752 3226 Q8IVF2 AHNAK2 Protein AHNAK2 yes no 0 0 0 By MS/MS 2 0 1 1 75.947 71.007 2 7.0901E-38 88809 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.27 113.55 46402000 0 46402000 0 0 0 0 0 0 0 0 0 0 0 0 0 55203 3226 49595 463966 367153 367153 1 VEAENISPK Unmodified 985.50803 0.50802529 2708 Q53SF7 COBLL1 Cordon-bleu protein-like 1 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 22.008 22.347 2 0.02892 22108 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 48.794 32.018 21301000 0 0 0 0 0 0 0 0 0 0 0 0 12182000 9118800 0 55204 2708 49596 463967;463968 367154 367154 1 VEAFLITMEK Unmodified 1179.6209 0.62094656 1006 P14735 IDE Insulin-degrading enzyme yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 79.893 79.881 2 0.0050412 92599 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 70.552 60.771 24582000 0 0 0 13570000 0 0 3718900 0 0 0 0 0 0 0 7292900 55205 1006 49597 463969;463970;463971 367155;367156 367156 2 VEAFLITMEK Oxidation (M) 1195.6159 0.61586118 1006 P14735 IDE Insulin-degrading enzyme yes yes 0 1 0 By MS/MS 10 0 1 1 68.492 67.827 2 0.0016626 78600 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 82.749 60.009 31531000 0 0 0 31531000 0 0 0 0 0 0 0 0 0 0 0 55206 1006 49597 463972 367157;367158;367159 367158 1378 3 VEAFQTTISK Unmodified 1122.5921 0.59208927 4987 Q9UL46 PSME2 Proteasome activator complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.16 3.73 5 2 12 2 4 1 1 1 1 1 1 1 1 1 1 1 1 1 47.148 45.391 1;2 3.2512E-09 60645 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 159.37 124.01 3113000000 103970000 2083300000 52652000 45012000 29920000 80210000 50067000 56145000 34684000 78645000 80489000 77226000 54007000 81464000 205180000 55207 4987 49598 463973;463974;463975;463976;463977;463978;463979;463980;463981;463982;463983;463984;463985;463986;463987;463988;463989;463990;463991 367160;367161;367162;367163;367164;367165;367166;367167;367168;367169;367170;367171;367172;367173;367174;367175;367176;367177;367178;367179;367180;367181;367182;367183;367184;367185;367186 367177 25 VEAIDVEEAK Unmodified 1101.5554 0.55536941 1332 P33991 MCM4 DNA replication licensing factor MCM4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.88 3.69 2 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 49.264 49.032 2 8.3253E-05 93710 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 122.33 79.083 1651700000 99837000 1051700000 0 18784000 20649000 41979000 26652000 26303000 21587000 46582000 64459000 52970000 38013000 47042000 95151000 55208 1332 49599 463992;463993;463994;463995;463996;463997;463998;463999;464000;464001;464002;464003;464004;464005;464006;464007 367187;367188;367189;367190;367191;367192;367193;367194;367195;367196;367197;367198;367199;367200;367201;367202 367193 14 VEAILEK Unmodified 800.46437 0.46436956 694 O95817 BAG3 BAG family molecular chaperone regulator 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.82 3.56 3 8 1 2 1 1 1 1 1 1 1 1 33.248 32.326 2 0.027918 34012 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.058 14.343 731000000 18575000 556510000 0 0 13212000 13862000 20208000 11733000 12858000 0 0 0 16846000 23569000 43623000 55209 694 49600 464008;464009;464010;464011;464012;464013;464014;464015;464016;464017;464018 367203;367204;367205;367206 367204 4 VEAKPEVQSQPPR Unmodified 1463.7732 0.77324153 5028 Q9UN86 G3BP2 Ras GTPase-activating protein-binding protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 22.058 22.266 2;3 1.6356E-09 23167 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 95.345 82.494 1397600000 0 0 0 130310000 80904000 147740000 154940000 95261000 110890000 146500000 125820000 131250000 107050000 57691000 109220000 55210 5028 49601 464019;464020;464021;464022;464023;464024;464025;464026;464027;464028;464029;464030;464031;464032;464033;464034;464035;464036;464037;464038;464039;464040;464041;464042 367207;367208;367209;367210;367211;367212;367213;367214;367215;367216;367217;367218;367219 367207 11 VEALPEQVAPESR Unmodified 1423.7307 0.73070802 3966 Q96RE7 NACC1 Nucleus accumbens-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.89 52.036 2 4.0053E-07 58963 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 116.55 93.806 367930000 0 0 0 19941000 23107000 30033000 25366000 17462000 18994000 35134000 39122000 38564000 31483000 22779000 65950000 55211 3966 49602 464043;464044;464045;464046;464047;464048;464049;464050;464051;464052;464053;464054 367220;367221;367222;367223;367224;367225;367226;367227;367228;367229;367230 367227 8 VEALREAATAVEQEK Unmodified 1642.8526 0.85261407 693 O95816 BAG2 BAG family molecular chaperone regulator 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.493 55.622 3 0.00012987 62356 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.236 69.919 92094000 0 0 0 2634300 4064400 6222400 6464600 5239000 4605300 7216800 9638100 10959000 6911600 7234200 20904000 55212 693 49603 464055;464056;464057;464058;464059;464060;464061;464062;464063;464064;464065;464066 367231;367232;367233;367234;367235;367236;367237;367238;367239 367233 6 VEAMALKPDLVNVIK Unmodified 1638.9379 0.93786402 895 P09884 POLA1 DNA polymerase alpha catalytic subunit yes yes 0 0 1 By MS/MS 2 0 1 1 87.677 82.868 3 9.5054E-07 102891 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.73 97.926 58597000 0 58597000 0 0 0 0 0 0 0 0 0 0 0 0 0 55213 895 49604 464067 367240 367240 1 VEAMALKPDLVNVIK Oxidation (M) 1654.9328 0.93277864 895 P09884 POLA1 DNA polymerase alpha catalytic subunit yes yes 0 1 1 By MS/MS 2.5 0.5 1 1 2 80.397 76.379 3 0.011972 91681 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 51.939 45.618 61153000 0 61153000 0 0 0 0 0 0 0 0 0 0 0 0 0 55214 895 49604 464068;464069 367241 367241 1157 0 VEAPFIPK Unmodified 899.51165 0.5116541 1144;1056 P17612;P22694 PRKACA;PRKACB cAMP-dependent protein kinase catalytic subunit alpha;cAMP-dependent protein kinase catalytic subunit beta no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 63.361 62.022 2 0.011082 70866 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 77.741 60.179 1421100000 53773000 1016300000 59880000 15385000 15323000 24148000 22487000 17326000 13309000 25217000 30113000 27729000 22325000 25889000 51919000 55215 1056;1144 49605 464070;464071;464072;464073;464074;464075;464076;464077;464078;464079;464080;464081;464082;464083;464084;464085 367242;367243;367244;367245;367246;367247;367248;367249;367250;367251;367252;367253;367254 367242 13 VEAPQALR Unmodified 882.49232 0.49231565 1765 P55263 ADK Adenosine kinase yes yes 0 0 0 By MS/MS 10 0 1 1 30.998 31.707 2 0.022875 33492 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.799 35.349 5984700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5984700 55216 1765 49606 464086 367255 367255 1 VEAPSLDVHMDSPDINIEGPDVK Oxidation (M) 2492.1741 0.17408414 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 1 1 1 1 1 1 1 1 1 1 1 1 1 77.2 76.83 3 1.1507E-34 88416 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 103.27 96.158 254970000 0 49904000 5888000 0 11854000 14261000 10204000 20465000 15512000 19040000 14377000 26363000 14580000 19899000 32625000 55217 2172 49607 464087;464088;464089;464090;464091;464092;464093;464094;464095;464096;464097;464098;464099 367256;367257;367258;367259;367260;367261;367262;367263;367264;367265;367266;367267;367268;367269 367260 3542 13 VEAPSLDVHMDSPDINIEGPDVK Unmodified 2476.1792 0.17916952 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 84.906 81.422 3 1.1884E-23 101137 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.67 90.744 205780000 0 200980000 4801500 0 0 0 0 0 0 0 0 0 0 0 0 55218 2172 49607 464100;464101;464102 367270;367271 367270 2 VEAQHILASAPTDR Unmodified 1506.7791 0.77905519 2705 Q53H96 PYCRL Pyrroline-5-carboxylate reductase 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 2 2 1 2 1 2 1 1 1 1 44.859 44.938 2;3 4.039E-14 51063 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 96.414 77.203 254490000 0 0 0 18360000 36908000 28218000 27167000 45374000 16853000 25299000 26332000 8259400 10456000 11266000 0 55219 2705 49608 464103;464104;464105;464106;464107;464108;464109;464110;464111;464112;464113;464114;464115;464116;464117 367272;367273;367274;367275;367276;367277;367278;367279;367280;367281;367282;367283;367284;367285;367286;367287;367288;367289;367290;367291;367292 367292 18 VEAQLQELQVK Unmodified 1283.7085 0.70851601 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59.3 58.537 2 1.5217E-06 65655 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 166.19 140.38 1739400000 11215000 0 2889500 117920000 157390000 156200000 135170000 101320000 145790000 138350000 162670000 206620000 146040000 97458000 160360000 55220 1356 49609 464118;464119;464120;464121;464122;464123;464124;464125;464126;464127;464128;464129;464130;464131 367293;367294;367295;367296;367297;367298;367299;367300;367301;367302;367303;367304;367305;367306;367307;367308;367309;367310;367311;367312;367313;367314 367306 22 VEAYQWSVSEGR Unmodified 1409.6575 0.65754307 5085 Q9Y263 PLAA Phospholipase A-2-activating protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 56.784 57.114 2 4.9392E-08 64916 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 121.6 97.382 58256000 0 0 0 0 0 9600600 0 0 0 6182400 7964100 11507000 0 6221000 16781000 55221 5085 49610 464132;464133;464134;464135;464136;464137;464138;464139;464140 367315;367316;367317;367318;367319;367320;367321;367322;367323;367324 367315 10 VECVLAELK Unmodified 1059.5634 0.56343168 5211 Q9Y4W2 LAS1L Ribosomal biogenesis protein LAS1L yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 66.662 66.738 2 0.0037823 76215 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 88.948 45.702 94568000 0 0 0 4204100 4126300 5990400 4953000 0 5747100 7014800 8415300 13896000 16085000 12571000 11565000 55222 5211 49611 464141;464142;464143;464144;464145;464146;464147;464148;464149;464150;464151 367325;367326;367327;367328;367329;367330;367331;367332;367333;367334;367335 367333 11 VECYDYDNDGSHDLIGTFQTTMTK Oxidation (M) 2825.1796 0.1796398 458 O75131 CPNE3 Copine-3 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 77.554 73.427 3 9.9203E-12 91598 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.417 74.856 45894000 0 45894000 0 0 0 0 0 0 0 0 0 0 0 0 0 55223 458 49612 464152;464153 367336;367337 367336 587 2 VECYDYDNDGSHDLIGTFQTTMTK Unmodified 2809.1847 0.18472518 458 O75131 CPNE3 Copine-3 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 83.4 79.907 3 1.4156E-07 99325 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.435 68.332 95247000 0 93200000 2047400 0 0 0 0 0 0 0 0 0 0 0 0 55224 458 49612 464154;464155;464156 367338;367339 367338 2 VEDAADSATKPENLSSK Unmodified 1760.8428 0.84283724 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.42 2 1 1 24 2 2 2 2 2 2 2 2 2 2 2 2 2 26.473 26.323 2;3 6.6908E-54 32705 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.56 124.43 317270000 0 67543000 0 14799000 14251000 19663000 21739000 19511000 12175000 20729000 27643000 34568000 21885000 19928000 22842000 55225 1492 49613 464157;464158;464159;464160;464161;464162;464163;464164;464165;464166;464167;464168;464169;464170;464171;464172;464173;464174;464175;464176;464177;464178;464179;464180;464181;464182 367340;367341;367342;367343;367344;367345;367346;367347;367348;367349;367350;367351;367352;367353;367354;367355;367356;367357 367344 17 VEDALNLK Unmodified 900.49165 0.49164694 1464 P42704 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 5.57 3.85 3 1 3 1 2 1 1 1 1 43.87 40.775 2 0.012141 52306 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.71 45.433 280400000 8031700 232450000 14199000 0 6532100 12316000 0 0 6871300 0 0 0 0 0 0 55226 1464 49614 464183;464184;464185;464186;464187;464188;464189 367358;367359;367360;367361 367358 4 VEDALSYLDQVK Unmodified 1378.698 0.6980109 3994 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 80.145 79.836 2 4.5437E-15 98522 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 174.98 136.69 952140000 0 594380000 0 14556000 17908000 25648000 25358000 24572000 23325000 36854000 35447000 36462000 26608000 32778000 58245000 55227 3994 49615 464190;464191;464192;464193;464194;464195;464196;464197;464198;464199;464200;464201;464202 367362;367363;367364;367365;367366;367367;367368;367369;367370;367371;367372;367373;367374 367365 13 VEDAMLMFDK Oxidation (M) 1213.5359 0.5358963 3797 Q96DH6 MSI2 RNA-binding protein Musashi homolog 2 yes yes 0 1 0 By MS/MS 2 0 1 1 70.661 64.844 2 0.031236 82255 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 56.632 45.269 12954000 0 12954000 0 0 0 0 0 0 0 0 0 0 0 0 0 55228 3797 49616 464203 367375 367375 1 VEDAMLMFDK Unmodified 1197.541 0.54098168 3797 Q96DH6 MSI2 RNA-binding protein Musashi homolog 2 yes yes 0 0 0 By MS/MS 2 0 1 1 80.755 76.05 2 0.0067167 94619 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.111 77.96 44371000 0 44371000 0 0 0 0 0 0 0 0 0 0 0 0 0 55229 3797 49616 464204 367376 367376 1 VEDKPFEETGVEPVLETASSSAHSTQK Unmodified 2901.388 0.38797632 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.56 3.62 4 1 11 3 2 1 1 1 1 1 1 1 1 1 1 1 73.171 72.084 3;4 1.131E-24 82555 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 71.974 68.818 226930000 0 75743000 28611000 0 6054400 10564000 5098000 8441100 9160500 12142000 13091000 14112000 9169300 8739600 26009000 55230 3443 49617 464205;464206;464207;464208;464209;464210;464211;464212;464213;464214;464215;464216;464217;464218;464219;464220 367377;367378;367379;367380;367381;367382;367383;367384;367385;367386;367387;367388;367389;367390;367391 367390 15 VEDLFLTFAK Unmodified 1181.6332 0.6332258 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 88.664 87.547 2 0.0018332 110058 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.98 92.775 244530000 26298000 115210000 24761000 1874200 1862500 10641000 3660600 3483900 4284500 7766600 8779600 7390300 2862900 6430700 19227000 55231 2344 49618 464221;464222;464223;464224;464225;464226;464227;464228;464229;464230;464231;464232;464233;464234;464235;464236 367392;367393;367394;367395;367396;367397;367398;367399;367400;367401;367402;367403;367404;367405;367406;367407;367408;367409 367396 18 VEDLQFRVEEESITK Unmodified 1820.9156 0.91560825 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 no no 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 74.71 69.102 3 0.00055786 85684 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 58.831 42.404 19093000 10443000 0 8649600 0 0 0 0 0 0 0 0 0 0 0 0 55232 1286 49619 464237;464238 367410;367411 367411 2 VEDLQRQLEEK Unmodified 1385.7151 0.71505795 4077 Q99996 AKAP9 A-kinase anchor protein 9 yes yes 0 0 1 By MS/MS 3 0 1 1 43.805 38.999 3 0.0042216 48515 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 66.595 45.536 10688000 0 10688000 0 0 0 0 0 0 0 0 0 0 0 0 0 55233 4077 49620 464239 367412 367412 1 VEDLSLREENSENR Unmodified 1688.7966 0.79655575 4433 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 34.449 34.425 3 0.00024752 37809 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 59.607 47.692 43920000 0 0 0 8267600 4017200 6524500 7203400 4852200 0 7200100 0 0 5854800 0 0 55234 4433 49621 464240;464241;464242;464243;464244;464245;464246;464247;464248;464249 367413;367414;367415;367416;367417;367418;367419;367420;367421;367422;367423;367424;367425 367419 13 VEDLSTCNDLIAK Unmodified 1476.713 0.71300904 1132 P22059 OSBP Oxysterol-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 57.615 57.274 2 0.005702 64910 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 66.92 0 302810000 0 146410000 0 12098000 6428600 18568000 9483900 7620300 7205400 15683000 19256000 14171000 11942000 11702000 22242000 55235 1132 49622 464250;464251;464252;464253;464254;464255;464256;464257;464258;464259;464260;464261;464262 367426;367427;367428;367429 367428 4 VEDLTFTSPFCLQVK Unmodified 1782.8862 0.88622238 4069 Q99873 PRMT1 Protein arginine N-methyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS By matching 2 0 6 2 3 1 95.54 89.989 2;3 4.881E-116 112474 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 224.58 157.46 1222000000 34983000 1184000000 2992700 0 0 0 0 0 0 0 0 0 0 0 0 55236 4069 49623 464263;464264;464265;464266;464267;464268 367430;367431;367432;367433;367434;367435;367436 367431 7 VEDMAELTCLNEASVLHNLK Oxidation (M) 2301.0981 0.098082425 1356;1357 P35579;P35580 MYH9;MYH10 Myosin-9;Myosin-10 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 81.722 80.67 3 1.5714E-97 93407 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 172.37 156.78 1781600000 24019000 525590000 39376000 10532000 55598000 98111000 36021000 97335000 79386000 189090000 145690000 128260000 58897000 76127000 217560000 55237 1356;1357 49624 464269;464270;464271;464272;464273;464274;464275;464276;464277;464278;464279;464280;464281;464282;464283;464284;464285 367437;367438;367439;367440;367441;367442;367443;367444;367445;367446;367447;367448;367449;367450;367451;367452;367453;367454 367438 2099 18 VEDMAELTCLNEASVLHNLK Unmodified 2285.1032 0.1031678 1356;1357 P35579;P35580 MYH9;MYH10 Myosin-9;Myosin-10 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 4.29 3.61 5 2 4 1 1 1 90.621 87.527 2;3 5.6262E-93 107886 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 143.71 130.82 980180000 0 907000000 23441000 0 0 0 0 0 0 0 5448600 0 0 0 44296000 55238 1356;1357 49624 464286;464287;464288;464289;464290;464291;464292 367455;367456;367457;367458;367459;367460;367461;367462;367463;367464;367465;367466;367467 367455 12 VEDPTFLNQLQSGVNR Unmodified 1815.9115 0.91152593 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.189 80.248 2 7.8919E-50 91988 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 192.68 167.21 206830000 0 0 0 3938300 6756600 29341000 8665500 15966000 13374000 22045000 18055000 21987000 11388000 16534000 38780000 55239 2392 49625 464293;464294;464295;464296;464297;464298;464299;464300;464301;464302;464303;464304 367468;367469;367470;367471;367472;367473;367474;367475;367476;367477;367478;367479 367476 12 VEDREGPSSSK Unmodified 1189.5575 0.55749468 4847 Q9UBN7 HDAC6 Histone deacetylase 6 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 5.8743 2.5735 2 1.4245E-05 4596 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.32 80.77 23744000 0 23744000 0 0 0 0 0 0 0 0 0 0 0 0 0 55240 4847 49626 464305;464306 367480 367480 1 VEDSFEGERPGRR Unmodified 1532.7332 0.73316763 2777 Q5T5X7 BEND3 BEN domain-containing protein 3 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 21.407 21.764 4 0.0082743 21684 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 31.708 16.765 46354000 0 0 0 0 0 7364800 0 0 0 10058000 0 11403000 0 0 17529000 55241 2777 49627 464307;464308;464309;464310 367481 367481 1 VEDVSAVEIVGGATR Unmodified 1500.7784 0.77838649 3633 Q92598 HSPH1 Heat shock protein 105 kDa yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 1 1 1 1 1 2 2 70.141 70.249 2;3 7.8078E-27 80666 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 152.14 126.75 110680000 0 0 0 2650600 3065900 4973500 4439900 3811700 0 5262000 12505000 18213000 5174300 10326000 40255000 55242 3633 49628 464311;464312;464313;464314;464315;464316;464317;464318;464319;464320;464321;464322;464323;464324 367482;367483;367484;367485;367486;367487;367488;367489;367490;367491;367492;367493;367494;367495;367496 367490 14 VEDVSAVEIVGGATRIPAVK Unmodified 2009.1157 0.11570504 3633 Q92598 HSPH1 Heat shock protein 105 kDa yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.82 3.83 4 2 5 2 2 2 1 1 1 1 1 82.857 80.683 2;3 1.3272E-12 98546 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 93.684 84.278 552310000 156430000 169720000 166870000 0 0 0 0 0 0 6721300 5796400 6649200 0 4784800 35346000 55243 3633 49629 464325;464326;464327;464328;464329;464330;464331;464332;464333;464334;464335 367497;367498;367499;367500;367501;367502;367503;367504;367505;367506;367507;367508;367509;367510 367505 13 VEDVVVSDECR Unmodified 1305.5871 0.58708025 3814 Q96EK6 GNPNAT1 Glucosamine 6-phosphate N-acetyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 35.627 35.742 2 9.0586E-21 38908 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 190.24 144.24 102170000 0 0 0 0 20022000 13544000 6183800 7269500 4721700 19625000 0 30808000 0 0 0 55244 3814 49630 464336;464337;464338;464339;464340;464341;464342 367511;367512;367513;367514;367515;367516;367517 367516 7 VEDVVVSDECRGK Unmodified 1490.7035 0.70350699 3814 Q96EK6 GNPNAT1 Glucosamine 6-phosphate N-acetyltransferase yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 27.758 27.865 3 0.00035097 29415 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 66.533 54.367 142630000 0 0 0 10831000 18285000 14917000 3183200 0 4470700 17717000 33123000 40106000 0 0 0 55245 3814 49631 464343;464344;464345;464346;464347;464348;464349;464350 367518;367519;367520;367521;367522 367521 5 VEDYQLPDAK Unmodified 1176.5663 0.56626845 4969 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.385 45.554 2 0.0054644 51085 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 68.846 46.106 80706000 0 0 0 3253700 3489000 6535000 5139400 7341100 3436900 6344000 9765400 11613000 6479400 6178300 11131000 55246 4969 49632 464351;464352;464353;464354;464355;464356;464357;464358;464359;464360;464361;464362 367523;367524;367525;367526;367527;367528;367529;367530;367531;367532;367533;367534;367535 367530 13 VEEAEPEEFVVEK Unmodified 1532.7246 0.72461959 2249 Q13185 CBX3 Chromobox protein homolog 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 61.955 62.046 2 1.2829E-06 70072 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.937 61.683 109480000 0 0 0 5816300 4644800 8750500 5367200 4371600 6951600 11072000 11763000 14730000 12165000 0 23845000 55247 2249 49633 464363;464364;464365;464366;464367;464368;464369;464370;464371;464372;464373 367536;367537;367538;367539;367540;367541;367542;367543;367544;367545;367546 367539 11 VEEAFNCR Unmodified 1023.4444 0.44437918 1704 P52888 THOP1 Thimet oligopeptidase yes yes 0 0 0 By MS/MS 2 0 1 1 27.822 23.516 2 0.022577 30944 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.364 55.839 17731000 0 17731000 0 0 0 0 0 0 0 0 0 0 0 0 0 55248 1704 49634 464374 367547 367547 1 VEEAFNCRCK Unmodified 1311.57 0.56999039 1704 P52888 THOP1 Thimet oligopeptidase yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 22.172 18.758 3 0.0021787 23661 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 74.376 64.068 25245000 0 11880000 13365000 0 0 0 0 0 0 0 0 0 0 0 0 55249 1704 49635 464375;464376 367548 367548 1 VEEAQGMMK 2 Oxidation (M) 1053.4471 0.44708129 630 O95232 LUC7L3 Luc7-like protein 3 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 13 1 1 1 1 1 1 2 1 1 1 1 1 5.6465 5.7639 2 0.0010609 3426 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 93.195 63.389 63780000 0 0 0 5485300 4624700 6131100 6394900 5634900 6445100 514670 4396000 7327800 7943200 4201500 4680400 55250 630 49636 464377;464378;464379;464380;464381;464382;464383;464384;464385;464386;464387;464388;464389 367549;367550;367551;367552;367553;367554;367555;367556;367557;367558;367559;367560 367551 770;771 11 VEEAQGMMK Unmodified 1021.4573 0.45725205 630 O95232 LUC7L3 Luc7-like protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 22.882 22.749 2 0.0028761 22838 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 136.11 103.64 153820000 0 21844000 0 5001200 5031400 12326000 4767200 7912900 6709600 11074000 15056000 17436000 13295000 14562000 18803000 55251 630 49636 464390;464391;464392;464393;464394;464395;464396;464397;464398;464399;464400;464401;464402 367561;367562;367563;367564;367565;367566;367567;367568;367569;367570;367571;367572;367573;367574 367565 14 VEEAQGMMK Oxidation (M) 1037.4522 0.45216667 630 O95232 LUC7L3 Luc7-like protein 3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 2 1 1 1 1 1 1 2 2 1 1 1 9.8111 9.9592 2 0.0029311 6874 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 86.794 73.757 45603000 0 0 0 3453000 1708200 2944200 2346400 1132300 2323500 2622300 8392600 11763000 3629500 2312700 2975500 55252 630 49636 464403;464404;464405;464406;464407;464408;464409;464410;464411;464412;464413;464414;464415;464416;464417 367575;367576;367577;367578;367579 367576 770;771 5 VEEATVEER Unmodified 1060.5037 0.50366819 2398 Q14244 MAP7 Ensconsin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.349 16.529 2 0.0035983 16184 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 89.542 26.884 254090000 0 0 0 12472000 18085000 21247000 15644000 18372000 18855000 21444000 12546000 38964000 21023000 16036000 39401000 55253 2398 49637 464418;464419;464420;464421;464422;464423;464424;464425;464426;464427;464428;464429 367580;367581;367582;367583;367584;367585;367586;367587;367588;367589;367590;367591;367592;367593;367594 367591 15 VEEDIQQQK Unmodified 1115.5459 0.54586736 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 2 1 1 1 1 1 1 2 2 2 2 13.921 14.114 2 2.4448E-05 13856 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 144.38 106.82 61641000 0 0 0 9851400 2629400 5389400 2731500 7939800 2643700 2502500 5625600 7894400 7625200 0 6808100 55254 1029 49638 464430;464431;464432;464433;464434;464435;464436;464437;464438;464439;464440;464441;464442;464443;464444;464445 367595;367596;367597;367598;367599;367600;367601 367600 6 VEEDVASDLVMK Unmodified 1333.6435 0.64353249 4751 Q9NYU2 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 64.09 64.599 2 0.026847 73188 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.789 9.7757 8085100 0 0 0 0 0 0 0 0 0 0 0 2882200 0 0 5203000 55255 4751 49639 464446;464447 367602 367602 1 VEEDVASDLVMK Oxidation (M) 1349.6384 0.63844712 4751 Q9NYU2 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes yes 0 1 0 By MS/MS By matching By matching By matching By MS/MS By matching 10 0 6 1 1 1 1 1 1 52.944 53.07 2 0.0048674 59113 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 50.194 41.708 28230000 0 0 0 0 1615300 0 3374700 2621600 0 7212400 0 0 0 6132400 7273900 55256 4751 49639 464448;464449;464450;464451;464452;464453 367603 367603 6127 1 VEEEAAQK Unmodified 902.43453 0.434526 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 5.5941 5.6423 2 0.004491 3362 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 131.04 70.249 15754000 0 0 0 0 2242600 4777900 3100700 3447400 2185100 0 0 0 0 0 0 55257 1356 49640 464454;464455;464456;464457;464458 367604;367605 367604 2 VEEEDDAEHVLALTMLCLTEGAK Unmodified 2572.2037 0.20366971 523 O75607 NPM3 Nucleoplasmin-3 yes yes 0 0 0 By MS/MS 2 0 1 1 100.08 91.945 3 2.8918E-138 118447 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 195.39 179.3 59565000 59565000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55258 523 49641 464459 367606 367606 1 VEEEEDESALK Unmodified 1276.5671 0.56705631 2415 Q14566 MCM6 DNA replication licensing factor MCM6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.65 3.66 1 3 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 29.446 28.908 2 1.5491E-16 28803 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 168.8 137.42 348290000 99799000 47800000 1705300 10076000 6143600 15975000 8608800 9564100 9493400 12963000 29868000 21945000 14797000 18212000 41336000 55259 2415 49642 464460;464461;464462;464463;464464;464465;464466;464467;464468;464469;464470;464471;464472;464473;464474;464475;464476 367607;367608;367609;367610;367611;367612;367613;367614;367615;367616;367617;367618;367619;367620;367621;367622;367623;367624 367610 18 VEEEEER Unmodified 918.39306 0.39305511 1356;1357 P35579;P35580 MYH9;MYH10 Myosin-9;Myosin-10 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 5.8071 5.913 2 0.023411 3669 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 91.906 20.994 21856000 0 0 0 1889900 2118300 5027500 3825900 2294800 2654400 1078400 0 0 1133600 852960 979810 55260 1356;1357 49643 464477;464478;464479;464480;464481;464482;464483;464484;464485;464486 367625;367626;367627 367625 3 VEEEEERCQHLQAEK Unmodified 1912.8585 0.85850408 1356 P35579 MYH9 Myosin-9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 26 2 2 2 2 2 2 2 2 3 2 2 3 16.147 16.347 2;3;4 2.8875E-84 15682 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 169.92 145.36 2109900000 0 0 0 120950000 120960000 179180000 94130000 141230000 82401000 126890000 80726000 764450000 103250000 72928000 222750000 55261 1356 49644 464487;464488;464489;464490;464491;464492;464493;464494;464495;464496;464497;464498;464499;464500;464501;464502;464503;464504;464505;464506;464507;464508;464509;464510;464511;464512 367628;367629;367630;367631;367632;367633;367634;367635;367636;367637;367638;367639 367638 7 VEEEGSPGDPDHEASTQGR Unmodified 1995.8406 0.84060541 4782 Q9NZT2 OGFR Opioid growth factor receptor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.301 18.489 3 0.00014832 19125 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 54.805 36.888 44418000 0 0 0 3327500 2515900 5187400 2611700 2382200 3042600 2756200 5127600 3652500 3381400 3997600 6435400 55262 4782 49645 464513;464514;464515;464516;464517;464518;464519;464520;464521;464522;464523;464524 367640;367641;367642;367643;367644;367645;367646;367647;367648;367649;367650;367651;367652;367653;367654;367655 367640 16 VEEEGSPGDPDHEASTQGRTCGPEHSK Unmodified 2892.2217 0.22165605 4782 Q9NZT2 OGFR Opioid growth factor receptor yes yes 0 0 1 By MS/MS 2 0 1 1 21.061 18.258 4 1.0181E-05 23279 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 40.756 40.756 18452000 0 0 18452000 0 0 0 0 0 0 0 0 0 0 0 0 55263 4782 49646 464525 367656 367656 1 VEEEIQTLSQVLAAK Unmodified 1656.8934 0.89341625 1768 P55327 TPD52 Tumor protein D52 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.88 3.84 13 3 24 5 8 3 2 2 2 2 2 2 2 2 2 2 2 2 86.679 85.614 2;3 1.0638E-83 98512 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 222.49 196.45 9656100000 76986000 5777500000 35762000 65787000 219120000 173860000 179820000 334820000 231350000 417090000 446760000 480460000 254720000 319120000 642910000 55264 1768 49647 464526;464527;464528;464529;464530;464531;464532;464533;464534;464535;464536;464537;464538;464539;464540;464541;464542;464543;464544;464545;464546;464547;464548;464549;464550;464551;464552;464553;464554;464555;464556;464557;464558;464559;464560;464561;464562;464563;464564;464565 367657;367658;367659;367660;367661;367662;367663;367664;367665;367666;367667;367668;367669;367670;367671;367672;367673;367674;367675;367676;367677;367678;367679;367680;367681;367682;367683;367684;367685;367686;367687;367688;367689;367690;367691;367692;367693 367685 33 VEEEIVTLR Unmodified 1086.5921 0.59208927 325 O43399 TPD52L2 Tumor protein D54 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.56 3 2 1 13 2 1 1 1 1 1 2 1 1 1 1 1 1 1 57.528 56.59 2 0.0030095 63487 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 126.41 72.255 1406400000 0 32282000 1414800 94511000 107760000 86972000 125130000 0 87626000 123030000 169310000 194850000 122450000 101420000 159640000 55265 325 49648 464566;464567;464568;464569;464570;464571;464572;464573;464574;464575;464576;464577;464578;464579;464580;464581 367694;367695;367696;367697;367698;367699;367700;367701;367702;367703;367704;367705;367706;367707;367708;367709;367710;367711;367712;367713;367714 367711 21 VEEEIVTLRQVLAAK Unmodified 1696.9723 0.97233527 325 O43399 TPD52L2 Tumor protein D54 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 88.211 82.32 2;3 5.8533E-44 105193 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 156.36 121.61 179960000 162390000 16731000 830520 0 0 0 0 0 0 0 0 0 0 0 0 55266 325 49649 464582;464583;464584;464585 367715;367716;367717 367717 3 VEEELEK Unmodified 874.42838 0.42837799 4695 Q9NWB6 ARGLU1 Arginine and glutamate-rich protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 15.025 15.18 2 0.023205 14405 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 102.71 13.164 45839000 0 0 0 0 0 9250400 0 0 6509900 10427000 0 0 9100300 10552000 0 55267 4695 49650 464586;464587;464588;464589;464590 367718 367718 1 VEEENQGALEMIK Unmodified 1488.713 0.71300904 2746 Q5M775 SPECC1 Cytospin-B yes yes 0 0 0 By MS/MS 2 0 1 1 64.755 58.837 2 0.0074267 75350 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.894 42.904 15749000 0 15749000 0 0 0 0 0 0 0 0 0 0 0 0 0 55268 2746 49651 464591 367719 367719 1 VEEFGVVSNTR Unmodified 1235.6146 0.61461563 1178 P24863 CCNC Cyclin-C yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 48.107 48.429 2 0.00043138 53637 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.533 55.367 32231000 0 0 0 0 0 0 0 6259400 0 5840500 0 0 0 6133700 13998000 55269 1178 49652 464592;464593;464594;464595;464596 367720;367721;367722;367723;367724 367720 5 VEEFLYEK Unmodified 1055.5175 0.51752734 4592 Q9NR46 SH3GLB2 Endophilin-B2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.535 52.678 2 0.0055025 58579 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 116.73 75.223 462530000 0 0 0 19659000 23034000 30272000 27666000 45160000 21114000 49756000 38954000 54937000 70182000 32334000 49459000 55270 4592 49653 464597;464598;464599;464600;464601;464602;464603;464604;464605;464606;464607;464608 367725;367726;367727;367728;367729;367730;367731;367732;367733;367734;367735;367736;367737 367733 11 VEEGGRHPSPCQFTIATPK Unmodified 2110.0266 0.026572462 202 O14686 KMT2D Histone-lysine N-methyltransferase 2D yes yes 0 0 1 By MS/MS 2 0 1 1 61.001 52.759 4 0.0015708 71563 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.514 41.305 14807000 14807000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55271 202 49654 464609 367738;367739;367740 367740 3 VEEIAASK Unmodified 845.44945 0.44944778 2078 Q02543 RPL18A 60S ribosomal protein L18a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 14.338 14.569 2 0.023524 13706 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 94.114 34.474 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55272 2078 49655 464610;464611;464612;464613;464614;464615 367741;367742;367743;367744;367745;367746 367745 6 VEEIDAAILR Unmodified 1127.6186 0.61863837 2086 Q03001 DST Dystonin yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 69.622 69.808 2 0.010696 79369 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 55.549 29.166 3102700 0 0 0 0 0 0 0 0 0 0 0 0 0 3102700 0 55273 2086 49656 464616;464617 367747;367748 367747 2 VEEILEQADYLYESGETEK Unmodified 2244.0322 0.032154154 3793 Q96DB5 RMDN1 Regulator of microtubule dynamics protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 2 2 1 3 86.148 82.397 2;3 2.2043E-40 102284 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 161.76 154.86 31407000 0 31407000 0 0 0 0 0 0 0 0 0 0 0 0 0 55274 3793 49657 464618;464619;464620;464621 367749;367750;367751;367752 367749 4 VEEINPEYMLEK Unmodified 1492.7119 0.71194641 1451 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 76.779 76.883 2 1.6045E-05 88288 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 106.29 61.981 49049000 0 0 0 0 2578700 0 2595700 0 0 5322900 5885400 6789400 5268200 7286200 13323000 55275 1451 49658 464622;464623;464624;464625;464626;464627;464628;464629;464630 367753;367754;367755;367756;367757;367758;367759;367760;367761;367762;367763 367757 11 VEEISPNIR Unmodified 1055.5611 0.56112349 4895 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 2 1 1 1 1 1 1 1 1 42.829 42.824 2 0.0031425 46695 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 133.55 89.101 264690000 0 0 0 0 66534000 71865000 0 79624000 0 0 0 0 0 46664000 0 55276 4895 49659 464631;464632;464633;464634;464635;464636;464637;464638;464639;464640 367764;367765;367766;367767;367768;367769;367770;367771;367772;367773;367774;367775 367770 12 VEEKPPNPMEGMTEEQK 2 Oxidation (M) 2003.8816 0.88160729 4556 Q9NPQ8 RIC8A Synembryn-A yes yes 0 2 1 By MS/MS By matching 2 0 2 1 1 87.802 84.15 3 0.0018611 104507 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 52.823 49.211 214300000 0 211070000 3235100 0 0 0 0 0 0 0 0 0 0 0 0 55277 4556 49660 464641;464642 367776 367776 5965;5966 0 VEEKPPPAPSIATK Unmodified 1462.8031 0.80314468 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.697 38.876 3 0.0042007 43128 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 58.723 46.303 163700000 0 0 0 7126100 7770100 14686000 8786100 7174200 14606000 15687000 17279000 19833000 16595000 11553000 22599000 55278 5216 49661 464643;464644;464645;464646;464647;464648;464649;464650;464651;464652;464653;464654 367777;367778;367779;367780;367781;367782;367783;367784;367785 367779 6 VEEKPPPAPSIATKPVR Unmodified 1815.0254 0.025433475 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 2 2 2 2 1 1 2 42.487 42.651 3;4 0.00031162 47428 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 62.475 57.37 280320000 0 0 0 17149000 21645000 6676200 26046000 23837000 12656000 25455000 32983000 39718000 25919000 17655000 30582000 55279 5216 49662 464655;464656;464657;464658;464659;464660;464661;464662;464663;464664;464665;464666;464667;464668;464669;464670;464671;464672;464673;464674;464675;464676 367786;367787;367788;367789;367790;367791;367792;367793;367794;367795;367796;367797;367798;367799;367800;367801 367794 11 VEELALQSMISSR Unmodified 1461.7497 0.7497289 569 O75971 SNAPC5 snRNA-activating protein complex subunit 5 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 80.24 80.392 2 0.00053277 92913 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 78.488 62.29 57780000 0 0 0 0 0 0 0 5256800 0 9484000 7132100 11229000 5911700 7524500 11242000 55280 569 49663 464677;464678;464679;464680;464681;464682;464683 367802;367803;367804 367804 3 VEELEEK Unmodified 874.42838 0.42837799 664 O95466 FMNL1 Formin-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 15.082 15.139 2 0.023334 14442 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 90.777 12.598 40576000 0 0 0 7323900 7353200 0 9314400 5602100 0 0 0 10982000 0 0 0 55281 664 49664 464684;464685;464686;464687;464688 367805;367806;367807;367808;367809 367807 5 VEELEGER Unmodified 959.45599 0.45598972 5278 Q9Y6D9 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.732 18.929 2 0.0082674 19031 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 86.794 43.67 124980000 0 0 0 7689100 4785800 8407500 7603300 7392200 7469900 10935000 11395000 11070000 12305000 13220000 22705000 55282 5278 49665 464689;464690;464691;464692;464693;464694;464695;464696;464697;464698;464699;464700 367810;367811;367812;367813 367813 4 VEELEGERSRLEEEK Unmodified 1830.8959 0.89593544 5278 Q9Y6D9 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.36 2.17 2 23 2 2 2 2 2 2 2 1 2 2 2 2 2 35.646 35.275 3;4 4.6847E-06 38905 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 87.18 55.79 504030000 42723000 0 0 16952000 13050000 44932000 38795000 41279000 30104000 24605000 37464000 42491000 54079000 47494000 70065000 55283 5278 49666 464701;464702;464703;464704;464705;464706;464707;464708;464709;464710;464711;464712;464713;464714;464715;464716;464717;464718;464719;464720;464721;464722;464723;464724;464725 367814;367815;367816;367817;367818;367819;367820;367821;367822;367823;367824;367825;367826;367827;367828;367829;367830;367831;367832 367829 17 VEELIESEAPPK Unmodified 1339.6871 0.68711187 3748 Q96B23 C18orf25 Uncharacterized protein C18orf25 yes yes 0 0 0 By MS/MS 2 0 1 1 55.201 49.387 2 9.5737E-07 63685 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.5 114.5 79453000 0 79453000 0 0 0 0 0 0 0 0 0 0 0 0 0 55284 3748 49667 464726 367833 367833 1 VEELSQALSQK Unmodified 1230.6456 0.6455814 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 49.894 49.414 2 0.00047189 56519 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 84.17 59.948 127110000 0 42485000 0 0 6329000 0 8441000 0 0 0 17640000 11592000 15020000 10702000 14904000 55285 2446 49668 464727;464728;464729;464730;464731;464732;464733;464734;464735;464736 367834;367835;367836;367837;367838;367839;367840;367841;367842;367843;367844 367844 11 VEELSYVFMLELK Oxidation (M) 1614.8215 0.82149686 5302 yes yes 0 1 0 By MS/MS 2 0 1 1 64.64 58.722 2 0.010109 75281 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.371 31.846 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55286 5302 49669 464737 367845 367845 6708 1 VEELVAK Unmodified 786.44872 0.4487195 4695 Q9NWB6 ARGLU1 Arginine and glutamate-rich protein 1 yes yes 0 0 0 By MS/MS 3 0 1 1 24.224 20.176 2 0.033071 25257 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 86.086 0 3249700 0 3249700 0 0 0 0 0 0 0 0 0 0 0 0 0 55287 4695 49670 464738 367846 367846 1 VEEMPHKPQK Oxidation (M) 1237.6125 0.61250714 5241 Q9Y5N6 ORC6 Origin recognition complex subunit 6 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 5.7336 5.8816 3 0.0017707 3852 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 70.1 41.926 61030000 0 0 0 0 0 6437500 5934300 4468600 6227100 9448700 0 9598500 0 8865200 10050000 55288 5241 49671 464739;464740;464741;464742;464743;464744;464745;464746 367847;367848;367849;367850;367851;367852 367852 6642 6 VEEMPHKPQK Unmodified 1221.6176 0.61759251 5241 Q9Y5N6 ORC6 Origin recognition complex subunit 6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 10.424 10.634 3 0.0049046 9466 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 62.823 30.3 35112000 0 0 0 0 0 0 7500200 5871900 0 0 0 8564900 0 0 13175000 55289 5241 49671 464747;464748;464749;464750 367853;367854;367855;367856 367853 2 VEENFLK Unmodified 877.45453 0.45453316 3731 Q96A33 CCDC47 Coiled-coil domain-containing protein 47 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 66.72 66.122 2 0.044016 76323 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 66.994 0 19739000 0 0 0 18049000 1689900 0 0 0 0 0 0 0 0 0 0 55290 3731 49672 464751;464752 367857 367857 1 VEENIQK Unmodified 858.4447 0.44469675 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 10.163 10.346 2 0.023669 9223 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 84.359 18.461 22614000 0 0 0 0 3385700 0 0 4762500 0 0 806340 6517700 7141800 0 0 55291 3443 49673 464753;464754;464755;464756;464757 367858;367859;367860 367859 3 VEENPDADSDFDAK Unmodified 1550.6373 0.63726114 4327 Q9H0G5 NSRP1 Nuclear speckle splicing regulatory protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 34.441 34.494 2 0.010785 38184 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 47.844 42.903 27848000 0 0 0 3243900 2210300 3721800 2870100 0 3145300 0 7507300 0 3150200 1999300 0 55292 4327 49674 464758;464759;464760;464761;464762;464763;464764;464765 367861 367861 1 VEEPENPAAK Unmodified 1082.5244 0.52440364 4814 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.223 20.425 2 0.00091175 20904 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 114.89 55.977 137380000 0 0 0 6612800 7380000 12627000 4581300 5674400 11836000 14097000 18654000 16126000 17735000 11597000 10455000 55293 4814 49675 464766;464767;464768;464769;464770;464771;464772;464773;464774;464775;464776;464777 367862;367863;367864;367865;367866;367867;367868;367869;367870 367865 8 VEEPEQQNK Unmodified 1099.5146 0.51456723 4492 Q9HAW4 CLSPN Claspin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 7.3629 7.4754 2 0.0064261 5645 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 75.109 30.662 20643000 0 0 0 1373300 1661700 1527400 2369900 2065100 1828500 1463400 0 2078000 2227300 1756100 2292600 55294 4492 49676 464778;464779;464780;464781;464782;464783;464784;464785;464786;464787;464788 367871;367872;367873;367874;367875 367872 5 VEEPSGAVTTPAGVIAAAGPQGPGTGE Unmodified 2419.1867 0.18669774 2019 P85037 FOXK1 Forkhead box protein K1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 81.17 81.23 2;3 2.3401E-25 93730 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 109.35 91.723 360150000 0 0 0 27615000 28243000 37220000 27445000 22499000 18559000 33841000 26986000 35236000 31338000 28286000 42886000 55295 2019 49677 464789;464790;464791;464792;464793;464794;464795;464796;464797;464798;464799;464800;464801;464802;464803;464804;464805;464806;464807;464808;464809;464810;464811;464812 367876;367877;367878;367879;367880;367881;367882;367883;367884;367885;367886;367887;367888;367889;367890;367891;367892;367893;367894;367895;367896 367883 21 VEEPSQCLASGTAISELIIEDNNASPQK Unmodified 2999.4394 0.43935996 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 91.382 87.85 3 2.7432E-47 108950 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 111.55 101.58 67304000 0 65746000 1557500 0 0 0 0 0 0 0 0 0 0 0 0 55296 2804 49678 464813;464814;464815 367897;367898;367899 367897 3 VEEQEPELTSTPNFVVEVIK Unmodified 2286.1631 0.16310875 2134 Q07021 C1QBP Complement component 1 Q subcomponent-binding protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.29 3.67 4 2 11 2 3 1 1 1 1 1 1 1 1 1 1 1 1 91.28 89.581 2;3 8.3342E-06 112278 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.454 60.244 756050000 55560000 637230000 6082800 0 1645300 1321600 1052900 2882600 1508500 5704600 9612000 6284000 1578200 4360600 21227000 55297 2134 49679 464816;464817;464818;464819;464820;464821;464822;464823;464824;464825;464826;464827;464828;464829;464830;464831;464832 367900;367901;367902;367903;367904;367905;367906;367907;367908;367909;367910;367911;367912;367913;367914;367915;367916;367917;367918 367910 18 VEESGEHVILGTGELYLDCVMHDLRK Unmodified 2998.4528 0.45284196 2481 Q15029 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 0 0 1 By MS/MS 1.5 0.5 1 1 2 103.94 102.51 4;5 3.5239E-32 116291 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 105.79 100.17 92756000 92756000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55298 2481 49680 464833;464834 367919;367920 367920 2 VEESPLEK Unmodified 929.47058 0.47057715 3238 Q8IWC1 MAP7D3 MAP7 domain-containing protein 3 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching 10 0 7 1 1 1 1 1 1 1 22.006 22.333 2 0.011957 23232 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 75.738 8.745 39105000 0 0 0 0 0 0 0 1717600 6222600 0 0 0 11472000 8797200 10896000 55299 3238 49681 464835;464836;464837;464838;464839;464840;464841 367921;367922;367923 367922 3 VEESSEISPEPK Unmodified 1329.63 0.62999092 584 O94782 USP1 Ubiquitin carboxyl-terminal hydrolase 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 28.864 29.05 2 0.023423 31379 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 64.297 36.555 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55300 584 49682 464842;464843 367924;367925 367924 2 VEESSWLIEDGK Unmodified 1390.6616 0.6616254 5087 Q9Y266 NUDC Nuclear migration protein nudC yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 66.634 65.033 2 3.1386E-24 82183 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 172.69 139.43 1631900000 51551000 1152200000 10730000 17536000 12274000 42991000 22051000 20692000 12717000 48126000 46412000 43143000 26102000 32367000 92929000 55301 5087 49683 464844;464845;464846;464847;464848;464849;464850;464851;464852;464853;464854;464855;464856;464857;464858;464859;464860 367926;367927;367928;367929;367930;367931;367932;367933;367934;367935;367936;367937;367938;367939;367940;367941;367942;367943;367944;367945 367931 18 VEESYDLK Unmodified 981.46549 0.46549177 1251 P29508 SERPINB3 Serpin B3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.573 29.765 2 0.0087284 31066 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.212 56.789 649100000 0 0 0 412200000 21211000 16953000 21587000 17582000 18031000 27093000 33144000 19616000 24546000 17782000 19354000 55302 1251 49684 464861;464862;464863;464864;464865;464866;464867;464868;464869;464870;464871;464872 367946;367947;367948;367949;367950;367951;367952;367953;367954;367955;367956;367957;367958 367949 13 VEETTEHLVTK Unmodified 1284.6561 0.65614609 1695 P52732 KIF11 Kinesin-like protein KIF11 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.71 2.94 5 26 1 2 2 2 2 2 2 2 2 2 2 3 3 2 2 29.428 28.928 2;3 3.7997E-08 32035 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 179.09 125.6 600580000 3757300 344970000 10053000 3755600 13338000 22555000 18293000 13238000 13681000 18774000 16628000 37054000 40589000 12193000 31703000 55303 1695 49685 464873;464874;464875;464876;464877;464878;464879;464880;464881;464882;464883;464884;464885;464886;464887;464888;464889;464890;464891;464892;464893;464894;464895;464896;464897;464898;464899;464900;464901;464902;464903 367959;367960;367961;367962;367963;367964;367965;367966;367967;367968 367963 8 VEEVELPVEK Unmodified 1169.618 0.61796967 4069 Q99873;Q9NR22 PRMT1;PRMT8 Protein arginine N-methyltransferase 1;Protein arginine N-methyltransferase 8 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 60.212 58.652 2 4.5519E-06 71666 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 166.16 102.6 1454100000 38625000 1135700000 6643200 6813300 7054200 11603000 6228400 10010000 8515100 12485000 34578000 26933000 15893000 32345000 100700000 55304 4069 49686 464904;464905;464906;464907;464908;464909;464910;464911;464912;464913;464914;464915;464916;464917;464918;464919;464920 367969;367970;367971;367972;367973;367974;367975;367976;367977;367978;367979;367980;367981;367982;367983;367984;367985;367986;367987 367978 19 VEEVGPYTYR Unmodified 1211.5823 0.58225287 2366 Q14108 SCARB2 Lysosome membrane protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 46.54 46.536 2 0.0090005 53028 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 68.371 20.335 15577000 0 0 0 6147000 0 0 0 0 0 0 0 0 6263000 3166800 0 55305 2366 49687 464921;464922;464923 367988;367989;367990 367990 2 VEEVLNDWK Unmodified 1130.5608 0.56078914 2484 Q15042 RAB3GAP1 Rab3 GTPase-activating protein catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 60.347 59.378 2 3.2657E-06 76278 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 175.38 175.38 178830000 0 111580000 0 0 0 0 6986000 6487900 0 10514000 0 13377000 9263800 8192000 12434000 55306 2484 49688 464924;464925;464926;464927;464928;464929;464930;464931;464932 367991;367992;367993 367992 3 VEEVNRQQSAQLEQLVK Unmodified 1997.0542 0.054167421 4102 Q9BQS8 FYCO1 FYVE and coiled-coil domain-containing protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 68.201 62.301 3 0.039957 79563 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 22.867 13.613 13224000 0 13224000 0 0 0 0 0 0 0 0 0 0 0 0 0 55307 4102 49689 464933 367994 367994 1 VEEVVSLMNEDEK Oxidation (M) 1535.7025 0.70250394 227 O14920 IKBKB Inhibitor of nuclear factor kappa-B kinase subunit beta yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 52.11 46.776 2 0.0012398 60704 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.05 63.536 11360000 0 11360000 0 0 0 0 0 0 0 0 0 0 0 0 0 55308 227 49690 464934;464935 367995 367995 296 1 VEEVVSLMNEDEK Unmodified 1519.7076 0.70758931 227 O14920 IKBKB Inhibitor of nuclear factor kappa-B kinase subunit beta yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 71.646 65.919 2 0.00054866 83819 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.84 99.999 27817000 0 27817000 0 0 0 0 0 0 0 0 0 0 0 0 0 55309 227 49690 464936;464937 367996;367997;367998 367997 3 VEFDEEFSGAPVEGAGEEALTPSVPINK Unmodified 2917.3869 0.38691369 2084 Q02880 TOP2B DNA topoisomerase 2-beta yes yes 0 0 0 By MS/MS 3 0 1 1 88.373 85.162 3 0.0097603 101982 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 23.054 21.265 3579300 0 3579300 0 0 0 0 0 0 0 0 0 0 0 0 0 55310 2084 49691 464938 367999 367999 1 VEFFPHQEK Unmodified 1159.5662 0.56620887 2786 Q5T8P6 RBM26 RNA-binding protein 26 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 4 20 1 1 2 2 1 1 2 1 1 2 2 2 2 3 1 45.154 44.408 2;3 0.003237 49265 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 90.709 70.188 928500000 111710000 52336000 94627000 52033000 38757000 54074000 64412000 33182000 39441000 49001000 52693000 101660000 65202000 60811000 58570000 55311 2786 49692 464939;464940;464941;464942;464943;464944;464945;464946;464947;464948;464949;464950;464951;464952;464953;464954;464955;464956;464957;464958;464959;464960;464961;464962 368000;368001;368002;368003;368004;368005;368006;368007;368008;368009;368010;368011;368012;368013;368014;368015;368016;368017;368018;368019;368020;368021 368002 18 VEFLECSAK Unmodified 1081.5114 0.51139611 5240 Q9Y5M8 SRPRB Signal recognition particle receptor subunit beta yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 48.013 48.223 2 0.005778 54109 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 76.827 58.051 63817000 0 0 0 8253500 0 0 0 5855000 0 10107000 9514800 12235000 10578000 7274200 0 55312 5240 49693 464963;464964;464965;464966;464967;464968;464969 368022;368023;368024;368025;368026;368027;368028 368023 7 VEFLEDFGSDVNK Unmodified 1497.6987 0.69873919 3145 Q86UA1 PRPF39 Pre-mRNA-processing factor 39 yes yes 0 0 0 By MS/MS 3 0 1 1 82.624 79.351 2 0.034735 95168 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 56.359 43.403 1883900 0 1883900 0 0 0 0 0 0 0 0 0 0 0 0 0 55313 3145 49694 464970 368029 368029 1 VEFLRNELEIPGQYDGR Unmodified 2034.0171 0.017053633 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 1 By MS/MS 10 0 1 1 80.052 80.282 3 1.2548E-13 92320 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 92.307 83.658 18566000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18566000 55314 1986 49695 464971 368030 368030 1 VEFMDDTSR Oxidation (M) 1114.4601 0.46008882 1919 P62857 RPS28 40S ribosomal protein S28 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 25.596 25.797 2 0.0059303 25842 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.993 63.004 325250000 0 0 0 20237000 21767000 19533000 16303000 21321000 13800000 23654000 33583000 34228000 43826000 35526000 41472000 55315 1919 49696 464972;464973;464974;464975;464976;464977;464978;464979;464980;464981;464982;464983;464984;464985;464986;464987;464988;464989;464990;464991;464992;464993;464994;464995 368031;368032;368033;368034;368035;368036;368037;368038;368039;368040;368041;368042;368043;368044;368045 368036 3100 15 VEFMDDTSR Unmodified 1098.4652 0.4651742 1919 P62857 RPS28 40S ribosomal protein S28 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 2 1 1 1 1 1 41.156 41.333 2 0.0037735 46871 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 96.311 78.402 350330000 0 0 0 14255000 21155000 18725000 11959000 21518000 11986000 27945000 30940000 50725000 33199000 41718000 66209000 55316 1919 49696 464996;464997;464998;464999;465000;465001;465002;465003;465004;465005;465006;465007;465008 368046;368047;368048;368049;368050;368051;368052;368053;368054;368055;368056;368057;368058 368057 13 VEFSISDK Unmodified 923.46001 0.46001246 517 O75534 CSDE1 Cold shock domain-containing protein E1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 48.607 48.828 2 0.0067966 53980 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 96.492 36.851 176470000 0 0 0 7474400 0 12595000 8276700 7781700 16595000 13966000 15018000 21274000 11812000 19896000 41785000 55317 517 49697 465009;465010;465011;465012;465013;465014;465015;465016;465017;465018;465019 368059;368060;368061;368062;368063;368064;368065;368066;368067;368068;368069;368070 368067 12 VEFTEDLQK Unmodified 1107.5448 0.54480473 582 O94763 URI1 Unconventional prefoldin RPB5 interactor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 48.831 49.233 2 0.012243 54621 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.602 43.616 41222000 0 0 0 0 0 0 0 0 0 7723500 0 0 23903000 0 9594800 55318 582 49698 465020;465021;465022 368071 368071 1 VEGDLKGPEVDLK Unmodified 1397.7402 0.74021007 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 49.086 49.266 3 0.00055694 54607 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 69.716 0 237630000 0 0 0 30984000 20441000 0 0 11215000 10403000 0 26912000 40064000 42360000 18677000 36575000 55319 2172 49699 465023;465024;465025;465026;465027;465028;465029;465030;465031;465032 368072;368073;368074;368075;368076;368077;368078;368079;368080;368081 368077 10 VEGDMQVPDLDIK Oxidation (M) 1473.7021 0.70211 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 64.788 64.389 2 6.3964E-12 74256 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 122.42 112.99 139460000 0 28100000 0 8066000 7912900 0 9907500 7455400 8352400 9759100 9526000 13703000 14250000 10313000 12115000 55320 2172 49700 465033;465034;465035;465036;465037;465038;465039;465040;465041;465042;465043;465044 368082;368083;368084;368085;368086;368087;368088;368089;368090;368091;368092;368093;368094;368095;368096;368097;368098;368099 368099 3543 17 VEGDMQVPDLDIK Unmodified 1457.7072 0.70719538 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS 10 0 1 1 76.358 76.567 2 0.0082615 88437 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 80.014 51.806 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55321 2172 49700 465045 368100 368100 1 VEGDMYESANNR Unmodified 1383.5725 0.57249282 2171 Q09472 EP300 Histone acetyltransferase p300 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 24.534 24.866 2 0.0053131 25228 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.347 54.517 9929800 0 0 0 0 0 2875900 0 0 0 0 0 0 0 2872800 4181100 55322 2171 49701 465046;465047;465048 368101;368102;368103 368102 2 VEGDVDVPK Unmodified 956.48148 0.48147619 3954 Q96QA5 GSDMA Gasdermin-A yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.797 28.991 2 0.005128 31304 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 82.75 36.778 152310000 0 0 0 43580000 10071000 12168000 5910900 8387400 5535500 15106000 15280000 18879000 7747800 6692500 2949200 55323 3954 49702 465049;465050;465051;465052;465053;465054;465055;465056;465057;465058;465059;465060 368104;368105;368106;368107;368108;368109;368110;368111;368112;368113;368114 368110 11 VEGEMKVPDVDIK Oxidation (M) 1473.7385 0.73849551 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 1 1 By matching By MS/MS By MS/MS 10 0 3 1 1 1 46.535 46.507 3 0.0020223 52297 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 48.229 36.661 24708000 0 0 0 4965900 0 0 0 7802300 0 0 0 0 11940000 0 0 55324 2172 49703 465061;465062;465063 368115 368115 3504 1 VEGFPTIYFAPSGDK Unmodified 1626.793 0.79297392 982 P13667 PDIA4 Protein disulfide-isomerase A4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 86.407 85.797 2 6.6377E-19 99759 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 108.37 96.209 2638400000 295220 2099300000 30684000 16862000 21888000 20584000 21281000 35083000 22661000 41326000 62260000 46750000 29502000 35554000 154360000 55325 982 49704 465064;465065;465066;465067;465068;465069;465070;465071;465072;465073;465074;465075;465076;465077;465078;465079 368116;368117;368118;368119;368120;368121;368122;368123;368124;368125;368126;368127;368128;368129;368130;368131;368132;368133;368134;368135 368129 20 VEGFPTIYFAPSGDKK Unmodified 1754.8879 0.88793694 982 P13667 PDIA4 Protein disulfide-isomerase A4 yes yes 0 0 1 By matching By matching By MS/MS 10 0 3 1 1 1 80.116 80.321 3 0.016414 92640 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 19.071 9.1519 11938000 0 0 0 0 0 0 0 1753200 0 0 2642600 0 0 0 7541800 55326 982 49705 465080;465081;465082 368136 368136 1 VEGGFDQYR Unmodified 1069.4829 0.48287317 4653 Q9NUQ8 ABCF3 ATP-binding cassette sub-family F member 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.795 35.977 2 0.0030604 39835 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 91.853 73.071 490560000 0 0 0 28708000 29932000 35133000 37416000 31238000 26826000 43325000 56944000 59353000 43616000 44210000 53862000 55327 4653 49706 465083;465084;465085;465086;465087;465088;465089;465090;465091;465092;465093;465094 368137;368138;368139;368140;368141;368142;368143;368144;368145;368146;368147;368148;368149;368150;368151;368152 368141 16 VEGHIQDK Unmodified 924.46649 0.46649483 4353 Q9H1P3 OSBPL2 Oxysterol-binding protein-related protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 6.5194 3.2763 2 0.0024359 5387 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.98 39.772 47172000 0 47172000 0 0 0 0 0 0 0 0 0 0 0 0 0 55328 4353 49707 465095 368153;368154 368154 2 VEGHIQDKNK Unmodified 1166.6044 0.60438529 4353 Q9H1P3 OSBPL2 Oxysterol-binding protein-related protein 2 yes yes 0 0 1 By MS/MS 10 0 1 1 5.7735 6.0483 3 0.039806 3734 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 28.958 0 4318200 0 0 0 0 0 0 0 0 0 0 4318200 0 0 0 0 55329 4353 49708 465096 368155 368155 1 VEGHVFPEFK Unmodified 1187.5975 0.597509 230 O14964 HGS Hepatocyte growth factor-regulated tyrosine kinase substrate yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.87 3.54 4 11 1 1 2 1 1 1 1 1 1 1 1 1 1 1 58.674 57.313 2;3 0.0033237 64417 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 75.509 56.266 432070000 30552000 18301000 192700000 14048000 8900800 17479000 13154000 18816000 0 18048000 15596000 15960000 17576000 23005000 27936000 55330 230 49709 465097;465098;465099;465100;465101;465102;465103;465104;465105;465106;465107;465108;465109;465110;465111 368156;368157;368158;368159;368160;368161;368162;368163;368164;368165;368166;368167;368168;368169 368156 8 VEGILQDVQK Unmodified 1127.6186 0.61863837 1536 P48382 RFX5 DNA-binding protein RFX5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54.469 53.896 2 2.2332E-09 69225 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 159.58 98.903 890030000 0 104810000 1552700 42639000 53234000 57044000 64566000 77900000 62481000 78500000 71997000 78093000 76185000 51960000 69066000 55331 1536 49710 465112;465113;465114;465115;465116;465117;465118;465119;465120;465121;465122;465123;465124;465125 368170;368171;368172;368173;368174;368175;368176;368177;368178;368179;368180;368181;368182;368183;368184;368185;368186;368187 368174 18 VEGITNQGK Unmodified 944.49271 0.49270958 4817 Q9P2E9 RRBP1 Ribosome-binding protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 15.02 11.679 2 0.016271 15642 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.229 47.874 19928000 0 19928000 0 0 0 0 0 0 0 0 0 0 0 0 0 55332 4817 49711 465126 368188;368189 368189 2 VEGLDPDNVR Unmodified 1112.5462 0.54620171 3686 Q92917 GPKOW G patch domain and KOW motifs-containing protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.908 41.087 2 0.0033461 45169 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.827 41.531 470850000 0 0 0 24247000 27679000 30364000 32940000 32475000 23073000 38841000 56846000 50207000 40609000 37149000 76418000 55333 3686 49712 465127;465128;465129;465130;465131;465132;465133;465134;465135;465136;465137;465138 368190;368191;368192;368193;368194;368195;368196;368197;368198;368199;368200;368201 368198 12 VEGLHINGPTGGNK Unmodified 1391.7157 0.71572665 3303 Q8N108 MIER1 Mesoderm induction early response protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.29 0.452 5 2 3 2 2 43.961 38.738 2;3 2.8307E-52 52397 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 189.33 130.35 352800000 225390000 52438000 74967000 0 0 0 0 0 0 0 0 0 0 0 0 55334 3303 49713 465139;465140;465141;465142;465143;465144;465145 368202;368203;368204;368205;368206;368207;368208;368209;368210 368207 8 VEGNFNPFASPQK Unmodified 1433.6939 0.69392858 4417 Q9H6K1 C6orf106 Uncharacterized protein C6orf106 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 66.227 66.456 2 0.022831 75516 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.982 16.08 38599000 0 0 0 0 0 5192200 0 2265100 0 0 10781000 0 7432700 0 12927000 55335 4417 49714 465146;465147;465148;465149;465150 368211 368211 1 VEGPAFTDAIR Unmodified 1174.5982 0.59823728 4003 Q96TA1 FAM129B Niban-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 62.968 62.988 2 0.0034464 71881 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 98.048 67.436 271970000 0 0 0 17277000 16360000 54548000 30112000 0 0 52105000 39330000 0 0 2458800 59784000 55336 4003 49715 465151;465152;465153;465154;465155;465156;465157;465158 368212;368213;368214;368215;368216;368217;368218 368214 1 VEGPGCSYLQHIQIETGAK Unmodified 2086.0153 0.015339073 3123 Q7Z7F0 KIAA0907 UPF0469 protein KIAA0907 yes yes 0 0 0 By MS/MS 3 0 1 1 77.262 73.783 3 0.017556 88711 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 36.451 18.962 4004000 0 4004000 0 0 0 0 0 0 0 0 0 0 0 0 0 55337 3123 49716 465159 368219 368219 1 VEGPKEELEVAGER Unmodified 1540.7733 0.77330111 1088 P19419 ELK1 ETS domain-containing protein Elk-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 42.922 42.95 3 0.00063156 47082 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 49.482 43.587 62991000 0 0 0 9759000 4931200 0 9259000 6902500 5066100 8293300 13178000 0 0 5602500 0 55338 1088 49717 465160;465161;465162;465163;465164;465165;465166;465167 368220;368221;368222;368223;368224 368222 5 VEGQRLVYQFK Unmodified 1365.7405 0.74048484 2567;1322;4032 Q15723;Q99607;P32519 ELF2;ELF4;ELF1 ETS-related transcription factor Elf-2;ETS-related transcription factor Elf-4;ETS-related transcription factor Elf-1 no no 0 0 1 By MS/MS 2 0 1 1 64.664 56.385 3 0.021513 75932 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.844 34.518 7110800 7110800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55339 2567;4032;1322 49718 465168 368225 368225 1 VEGRVSSDEDLK Unmodified 1332.6521 0.65212334 5254 Q9Y5X3 SNX5 Sorting nexin-5 yes yes 0 0 1 By MS/MS By MS/MS By matching 2 0 3 1 1 1 21.719 17.858 3 0.0062132 25564 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.606 17.799 198680000 22093000 159310000 17273000 0 0 0 0 0 0 0 0 0 0 0 0 55340 5254 49719 465169;465170;465171 368226;368227;368228;368229 368229 4 VEGSPTEEANLPTELQDNSLSPAASEAGEK Unmodified 3069.4262 0.42621232 1638 P50851 LRBA Lipopolysaccharide-responsive and beige-like anchor protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 77.487 77.546 3 2.8198E-47 89710 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 91.1 86.122 70551000 0 0 0 3628800 0 9116500 7086300 5771300 6195700 12301000 0 11290000 6752600 8408700 0 55341 1638 49720 465172;465173;465174;465175;465176;465177;465178;465179;465180 368230;368231;368232;368233;368234;368235;368236;368237;368238;368239 368238 10 VEGTDVTGIEEVVIPK Unmodified 1683.8931 0.8930819 3827 Q96EY7 PTCD3 Pentatricopeptide repeat domain-containing protein 3, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 83.092 82.334 2 1.3081E-24 101387 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 141.38 124.36 83312000 0 48934000 0 0 3414600 5681700 0 0 0 0 0 6498400 0 6583500 12199000 55342 3827 49721 465181;465182;465183;465184;465185;465186;465187;465188 368240;368241;368242;368243;368244;368245 368241 6 VEGTEPTTAFNLFVGNLNFNK Unmodified 2311.1485 0.14846174 1085 P19338 NCL Nucleolin yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 96.314 96.485 3 0.0050025 112014 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 30.094 24.28 4291800 0 0 0 0 0 0 0 0 0 0 1202700 0 0 0 3089000 55343 1085 49722 465189;465190 368246 368246 1 VEGTPSDPNPNDPR Unmodified 1493.6746 0.6746497 3878 Q96IJ6 GMPPA Mannose-1-phosphate guanyltransferase alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.261 24.466 2 3.0864E-08 25638 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 101.95 83.642 116570000 0 0 0 9816900 5449400 12890000 6698000 10051000 5739500 8438800 10312000 11593000 11330000 7243500 17007000 55344 3878 49723 465191;465192;465193;465194;465195;465196;465197;465198;465199;465200;465201;465202 368247;368248;368249;368250;368251;368252;368253;368254;368255;368256;368257;368258 368255 12 VEGVHTPRQK Unmodified 1149.6255 0.62545508 2988 Q6VY07 PACS1 Phosphofurin acidic cluster sorting protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 11.617 8.4598 3 0.017135 13357 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.37 28.897 228070000 211520000 10275000 6277100 0 0 0 0 0 0 0 0 0 0 0 0 55345 2988 49724 465203;465204;465205 368259;368260 368260 2 VEGVLASVSGTNVK Unmodified 1358.7405 0.74054442 17 A3KN83 SBNO1 Protein strawberry notch homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 59.408 58.746 2 0.00036794 67072 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 74.944 45.986 137070000 0 99268000 0 0 2165000 2607000 3064600 3861000 2180200 4081600 3373700 3652000 3563200 2454300 6800500 55346 17 49725 465206;465207;465208;465209;465210;465211;465212;465213;465214;465215;465216;465217;465218 368261;368262;368263;368264;368265;368266;368267;368268;368269;368270;368271 368268 11 VEGVVQHGSK Unmodified 1038.5458 0.54580778 4668 Q9NVH2 INTS7 Integrator complex subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By matching 2 0 3 1 1 1 8.7188 5.6332 2 0.0014511 8149 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.88 76.058 45985000 4741800 31272000 9971300 0 0 0 0 0 0 0 0 0 0 0 0 55347 4668 49726 465219;465220;465221 368272;368273 368272 2 VEGYIQDK Unmodified 950.47091 0.4709115 4235 Q9BXW6 OSBPL1A Oxysterol-binding protein-related protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 24.517 20.389 2 0.011953 26961 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.66 76.375 101460000 0 101460000 0 0 0 0 0 0 0 0 0 0 0 0 0 55348 4235 49727 465222 368274 368274 1 VEHEEMPEAK Unmodified 1197.5336 0.53358811 4488 Q9HAS0 C17orf75 Protein Njmu-R1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 16.16 15.685 2;3 0.020788 14319 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.336 25.105 83420000 0 32963000 0 3106100 1940600 4041500 3300500 0 1729800 5056800 6662500 8043300 0 7291800 9284000 55349 4488 49728 465223;465224;465225;465226;465227;465228;465229;465230;465231;465232;465233;465234 368275;368276;368277;368278 368276 3 VEHEEMPEAK Oxidation (M) 1213.5285 0.52850274 4488 Q9HAS0 C17orf75 Protein Njmu-R1 yes yes 0 1 0 By MS/MS 3 0 1 1 7.8874 4.529 3 0.035535 6304 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 47.894 30.868 32243000 0 32243000 0 0 0 0 0 0 0 0 0 0 0 0 0 55350 4488 49728 465235 368279 368279 0 VEHEISEGNVATAAAAALASAATK Unmodified 2281.155 0.15500368 3687 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 89.024 86.196 3 0.0012455 103054 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 37.228 27.944 6848200 0 3579500 3268700 0 0 0 0 0 0 0 0 0 0 0 0 55351 3687 49729 465236;465237 368280;368281;368282 368280 3 VEHGSVALPAIMR Unmodified 1378.7391 0.73910463 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.583 67.665 3 0.00046507 76575 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.025 40.204 189270000 0 0 0 12495000 5945900 20583000 11195000 7904000 8295800 14946000 13907000 19960000 12190000 18030000 43818000 55352 5187 49730 465238;465239;465240;465241;465242;465243;465244;465245;465246;465247;465248;465249 368283;368284;368285;368286;368287;368288;368289;368290;368291;368292;368293 368286 9 VEHGSVALPAIMR Oxidation (M) 1394.734 0.73401926 5187 Q9Y490 TLN1 Talin-1 yes yes 0 1 0 By matching By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 53.233 53.427 3 0.0019909 60577 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 46.378 27.632 122500000 0 0 0 0 0 34942000 0 759320 15648000 46751000 24401000 0 0 0 0 55353 5187 49730 465250;465251;465252;465253;465254 368294 368294 6573 1 VEHSDLSFSK Unmodified 1147.551 0.55095274 1858 P61769 B2M Beta-2-microglobulin;Beta-2-microglobulin form pI 5.3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.32 3.22 5 1 22 1 3 2 1 2 2 2 2 1 2 2 2 2 2 2 30.184 29.363 2;3 1.2975E-12 37678 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 219.7 70.048 3244700000 129790000 1663000000 509950000 51990000 49293000 33302000 51584000 59127000 26792000 58663000 115700000 114280000 91426000 91834000 197950000 55354 1858 49731 465255;465256;465257;465258;465259;465260;465261;465262;465263;465264;465265;465266;465267;465268;465269;465270;465271;465272;465273;465274;465275;465276;465277;465278;465279;465280;465281;465282 368295;368296;368297;368298;368299;368300;368301;368302;368303;368304;368305;368306;368307;368308;368309;368310;368311;368312 368307 7 VEHSPFSSFASQASGSSSSATTVTSK Unmodified 2573.1882 0.1881543 3061 Q7LBC6 KDM3B Lysine-specific demethylase 3B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 4 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64.068 63.027 3 4.9954E-118 71791 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 165.85 162.95 588820000 68593000 17333000 9695000 19480000 26215000 46207000 33593000 39789000 33656000 48197000 41963000 70472000 33858000 33032000 66737000 55355 3061 49732 465283;465284;465285;465286;465287;465288;465289;465290;465291;465292;465293;465294;465295;465296;465297;465298 368313;368314;368315;368316;368317;368318;368319;368320;368321;368322;368323;368324;368325;368326;368327;368328;368329;368330;368331;368332 368314 20 VEHVVSVLEK Unmodified 1137.6394 0.63937381 4751 Q9NYU2 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.55 3.65 8 1 20 3 3 3 2 1 2 2 1 2 1 2 2 2 1 2 43.853 42.139 2;3 8.8097E-11 60490 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 197.27 145.92 1024700000 366820000 275270000 206420000 11203000 8011000 21706000 13840000 3546000 8120100 15311000 19848000 23148000 4287600 4119800 43088000 55356 4751 49733 465299;465300;465301;465302;465303;465304;465305;465306;465307;465308;465309;465310;465311;465312;465313;465314;465315;465316;465317;465318;465319;465320;465321;465322;465323;465324;465325;465326;465327 368333;368334;368335;368336;368337;368338;368339;368340;368341;368342;368343;368344;368345;368346;368347;368348;368349;368350;368351;368352;368353;368354;368355;368356;368357;368358 368347 22 VEIAGPGFINVHLR Unmodified 1520.8463 0.8463469 1733 P54136 RARS Arginine--tRNA ligase, cytoplasmic yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 80.877 80.985 3 0.013797 93250 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.28 37.6 9979900 0 0 0 0 0 2455000 0 0 0 1269400 0 0 0 0 6255500 55357 1733 49734 465328;465329;465330 368359 368359 0 VEIATLTR Unmodified 901.52328 0.52328142 1196 P25789 PSMA4 Proteasome subunit alpha type-4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.64 2.9 1 1 9 2 1 1 1 1 1 1 1 1 1 49.129 48.371 2 0.006217 53581 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 162.5 101.72 777220000 0 42321000 0 55296000 0 0 0 40390000 22109000 37840000 104090000 115800000 44325000 81207000 233840000 55358 1196 49735 465331;465332;465333;465334;465335;465336;465337;465338;465339;465340;465341 368360;368361;368362;368363;368364;368365;368366;368367;368368;368369 368366 7 VEIATLTRENGK Unmodified 1329.7252 0.72522871 1196 P25789 PSMA4 Proteasome subunit alpha type-4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 2 3 2 47.448 41.839 2;3 4.5246E-13 52583 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 150.04 108.64 938590000 185690000 227660000 525230000 0 0 0 0 0 0 0 0 0 0 0 0 55359 1196 49736 465342;465343;465344;465345;465346;465347;465348 368370;368371;368372;368373;368374;368375;368376;368377 368377 6 VEIDPVTNQK Unmodified 1141.5979 0.59790293 4083 Q9BPZ7 MAPKAP1 Target of rapamycin complex 2 subunit MAPKAP1 yes yes 0 0 0 By MS/MS 2 0 1 1 42.178 37.082 2 0.0030867 48217 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.033 74.605 22620000 0 22620000 0 0 0 0 0 0 0 0 0 0 0 0 0 55360 4083 49737 465349 368378;368379 368378 2 VEIDQQQLTQQQLNGN Unmodified 1854.9072 0.90716883 3244 Q8IWS0 PHF6 PHD finger protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.134 62.231 2 0.0020134 71158 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 63.864 63.381 67538000 0 0 0 2865100 4111400 4748800 4622500 2967600 3318600 3846400 8895900 6458200 6450500 5090600 14162000 55361 3244 49738 465350;465351;465352;465353;465354;465355;465356;465357;465358;465359;465360;465361 368380;368381;368382;368383;368384 368384 5 VEIETSEEIQEK Unmodified 1432.6933 0.69331946 2427 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 47.337 41.774 2 0.0027965 54450 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.38 66.994 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55362 2427 49739 465362 368385 368385 1 VEIIANDQGNRTTPSYVAFTDTERLIGDAAK Unmodified 3364.6899 0.68991242 934;908;1743 P11142;P0DMV9;P0DMV8;P54652 HSPA8;HSPA1B;HSPA1A;HSPA2 Heat shock cognate 71 kDa protein;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock-related 70 kDa protein 2 no no 0 0 2 By MS/MS By MS/MS By MS/MS 2.25 0.433 6 2 4 3 1 91.803 86.387 3;4;5 5.1176E-103 109453 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 135.3 123.38 574760000 425580000 146300000 2875800 0 0 0 0 0 0 0 0 0 0 0 0 55363 934;908;1743 49740 465363;465364;465365;465366;465367;465368;465369;465370 368386;368387;368388;368389;368390;368391;368392 368391 7 VEILANDQGNR Unmodified 1227.6208 0.62076364 1047 P17066;P48741 HSPA6;HSPA7 Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.56 1 1 13 2 1 1 2 1 1 1 1 1 1 1 1 1 33.235 32.755 2 2.9629E-23 35828 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 171.36 0 7670300000 0 425890000 0 525760000 413780000 681880000 469850000 586170000 362600000 651480000 1000700000 1123600000 712090000 712600000 3993900 55364 1047 49741 465371;465372;465373;465374;465375;465376;465377;465378;465379;465380;465381;465382;465383;465384;465385 368393;368394;368395;368396;368397;368398;368399;368400;368401;368402;368403;368404;368405;368406;368407;368408;368409;368410;368411;368412;368413;368414;368415;368416;368417;368418;368419 368397 26 VEILANDQGNRTTPSYVAFTDTER Unmodified 2696.3042 0.30418711 1047 P17066;P48741 HSPA6;HSPA7 Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.2 3.92 3 2 1 1 1 1 1 76.868 73.858 3 2.5268E-44 85420 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.74 0 93417000 12496000 18643000 27607000 0 0 0 0 0 9302600 0 0 0 0 0 25369000 55365 1047 49742 465386;465387;465388;465389;465390 368420;368421;368422;368423;368424;368425 368421 6 VEILCEHPR Unmodified 1151.5757 0.5757277 2679 Q3ZCW2 LGALSL Galectin-related protein yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 2 1 2 32.699 32.882 2;3 0.01085 35150 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 48.283 34.076 96133000 0 0 0 6265300 0 4587100 3716700 6947900 6977700 0 33416000 0 6398500 27823000 0 55366 2679 49743 465391;465392;465393;465394;465395;465396;465397;465398;465399;465400 368426;368427 368426 2 VEILNPPREGK Unmodified 1250.6983 0.69828568 3568 Q8WVY7 UBLCP1 Ubiquitin-like domain-containing CTD phosphatase 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 4 2 2 46.481 40.711 2;3 0.0042682 51323 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 68.069 48.307 103720000 6190200 0 97531000 0 0 0 0 0 0 0 0 0 0 0 0 55367 3568 49744 465401;465402;465403;465404 368428;368429 368428 1 VEINPPDDMEWK Oxidation (M) 1487.6602 0.66024519 5131 Q9Y2Z0 SUGT1 Suppressor of G2 allele of SKP1 homolog yes yes 0 1 0 By MS/MS 2 0 1 1 66.234 60.316 2 0.0043722 76781 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.944 49.051 62506000 0 62506000 0 0 0 0 0 0 0 0 0 0 0 0 0 55368 5131 49745 465405 368430;368431 368430 6519 2 VEINPPDDMEWK Unmodified 1471.6653 0.66533057 5131 Q9Y2Z0 SUGT1 Suppressor of G2 allele of SKP1 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 78.174 73.398 2 3.0365E-05 91359 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.22 93.99 242040000 0 242040000 0 0 0 0 0 0 0 0 0 0 0 0 0 55369 5131 49745 465406 368432 368432 1 VEIQVHQK Unmodified 979.54508 0.5450795 3755 Q96BD5 PHF21A PHD finger protein 21A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 18.817 18.421 2 0.013714 18385 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 71.715 28.8 41279000 0 6381800 9372500 0 0 2142500 2250900 2352700 0 2692000 2289700 3633700 2746100 3040000 4376700 55370 3755 49746 465407;465408;465409;465410;465411;465412;465413;465414;465415;465416;465417 368433;368434;368435;368436;368437 368437 5 VEITPESILSALSK Unmodified 1485.829 0.82902508 2810 Q5VT52 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 2 1 1 1 1 1 1 1 1 1 97.854 97.043 2 1.612E-06 113245 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 111.63 92.85 61602000 0 14864000 0 1643700 1906100 1240700 1905100 0 2564100 20426000 10340000 3050900 0 3661100 0 55371 2810 49747 465418;465419;465420;465421;465422;465423;465424;465425;465426;465427;465428 368438;368439;368440;368441;368442;368443;368444;368445;368446;368447;368448;368449 368439 12 VEITTETIK Unmodified 1032.5703 0.5702912 3647 Q92643 PIGK GPI-anchor transamidase yes yes 0 0 0 By matching By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 43.444 43.581 2 0.0083679 48763 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 69.825 44.088 10633000 0 0 0 0 1912400 0 0 0 0 2912900 0 5807600 0 0 0 55372 3647 49748 465429;465430;465431;465432 368450;368451 368450 2 VEITYTPSDGTQK Unmodified 1437.6987 0.69873919 552 O75874 IDH1 Isocitrate dehydrogenase [NADP] cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.14 3.56 2 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 48.891 48.844 2 9.4738E-20 47853 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 155 155 438260000 100960000 0 0 18876000 5036200 5739700 7143700 9919600 0 9662000 52232000 28605000 12891000 31823000 155370000 55373 552 49749 465433;465434;465435;465436;465437;465438;465439;465440;465441;465442;465443;465444;465445;465446 368452;368453;368454;368455;368456;368457;368458;368459;368460;368461;368462;368463;368464;368465 368455 14 VEIVGMLQEDEK Oxidation (M) 1404.6806 0.68064628 2888 Q6IN85 SMEK1 Serine/threonine-protein phosphatase 4 regulatory subunit 3A yes yes 0 1 0 By MS/MS 2.33 0.471 2 1 3 61.244 55.906 2 0.005915 71874 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.65 22.759 16986000 0 16986000 0 0 0 0 0 0 0 0 0 0 0 0 0 55374 2888 49750 465447;465448;465449 368466;368467;368468 368466 4523 3 VEIVGMLQEDEK Unmodified 1388.6857 0.68573166 2888 Q6IN85 SMEK1 Serine/threonine-protein phosphatase 4 regulatory subunit 3A yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 79.125 72.692 2 5.7118E-07 92243 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.77 71.629 86166000 10260000 75906000 0 0 0 0 0 0 0 0 0 0 0 0 0 55375 2888 49750 465450;465451 368469;368470;368471 368470 3 VEIVSMLQEDEK Unmodified 1418.6963 0.69629635 2748 Q5MIZ7 SMEK2 Serine/threonine-protein phosphatase 4 regulatory subunit 3B yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 80.057 76.016 2 1.3916E-14 94547 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 166.55 127.4 134740000 0 134740000 0 0 0 0 0 0 0 0 0 0 0 0 0 55376 2748 49751 465452;465453 368472;368473 368472 2 VEKPPDNQK Unmodified 1053.5455 0.54547343 3465 Q8NI27 THOC2 THO complex subunit 2 yes yes 0 0 1 By matching By MS/MS 2 0 2 1 1 6.7507 3.413 2 0.045237 5440 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.909 41.704 32643000 4506300 28137000 0 0 0 0 0 0 0 0 0 0 0 0 0 55377 3465 49752 465454;465455 368474 368474 1 VELAEEDDGEK Unmodified 1232.5408 0.54084156 4393 Q9H4A3 WNK1 Serine/threonine-protein kinase WNK1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.934 25.137 2 2.0638E-05 26957 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 123.88 118.4 128320000 0 0 0 7306800 4791500 10732000 8876900 8853300 6016200 12527000 12258000 14239000 11711000 9218200 21786000 55378 4393 49753 465456;465457;465458;465459;465460;465461;465462;465463;465464;465465;465466;465467 368475;368476;368477;368478;368479;368480;368481;368482;368483;368484;368485;368486;368487 368477 13 VELAEICAK Unmodified 1031.5321 0.53213155 2052 Q01415 GALK2 N-acetylgalactosamine kinase yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 55.292 50.436 2 0.018714 65210 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.318 46.028 115350000 0 114040000 1313900 0 0 0 0 0 0 0 0 0 0 0 0 55379 2052 49754 465468;465469 368488 368488 1 VELANMNR Unmodified 945.4702 0.4702 4311 Q9GZZ9 UBA5 Ubiquitin-like modifier-activating enzyme 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 32.674 32.876 2 0.0050217 35347 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 114.72 86.209 166790000 0 0 0 9572100 5668400 0 9990600 10930000 7831000 20158000 19313000 22548000 14286000 13672000 32822000 55380 4311 49755 465470;465471;465472;465473;465474;465475;465476;465477;465478;465479;465480 368489;368490;368491;368492;368493;368494;368495;368496;368497 368496 6 VELAQLQEEWNEHNAK Unmodified 1936.9279 0.92790427 4376 Q9H307 PNN Pinin yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS 10 0 5 1 1 1 1 1 74.341 74.551 3 0.00010151 85542 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.104 56.561 36194000 0 0 0 0 0 0 0 4597200 5782400 5844200 0 7758400 0 0 12212000 55381 4376 49756 465481;465482;465483;465484;465485 368498;368499 368498 2 VELCSFSGYK Unmodified 1188.5485 0.5485099 2006 P83731 RPL24 60S ribosomal protein L24 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.134 60.238 2 4.4966E-08 69550 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 154.49 98.958 610870000 0 0 0 33631000 36727000 31491000 40735000 34872000 52076000 44325000 67159000 102950000 57122000 47718000 62066000 55382 2006 49757 465486;465487;465488;465489;465490;465491;465492;465493;465494;465495;465496;465497 368500;368501;368502;368503;368504;368505;368506;368507;368508;368509;368510;368511;368512;368513;368514 368513 15 VELDEARLSEK Unmodified 1287.667 0.66704513 3806 Q96EA4 SPDL1 Protein Spindly yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 46.056 40.313 3 0.029898 55754 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 44.299 18.826 18713000 6665400 0 12047000 0 0 0 0 0 0 0 0 0 0 0 0 55383 3806 49758 465498;465499 368515;368516 368515 2 VELDNMPLR Unmodified 1085.5539 0.55392962 2508 Q15233 NONO Non-POU domain-containing octamer-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 62.835 63.002 2 0.0036636 71046 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.81 86.653 150540000 0 0 0 0 7434000 15503000 9910400 8161500 5751000 14907000 13719000 22332000 9045000 14666000 29116000 55384 2508 49759 465500;465501;465502;465503;465504;465505;465506;465507;465508;465509;465510 368517;368518;368519;368520;368521;368522;368523;368524;368525;368526;368527 368520 11 VELDNMPLRGK Unmodified 1270.6704 0.67035637 2508 Q15233 NONO Non-POU domain-containing octamer-binding protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.25 3.75 6 1 13 2 3 2 1 1 1 1 1 1 1 1 2 1 1 1 53.098 51.052 2;3 1.3138E-05 57274 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 112.15 61.864 1214700000 507600000 115940000 66396000 25337000 21748000 41817000 41516000 32153000 29366000 48252000 45688000 61635000 35491000 45086000 96716000 55385 2508 49760 465511;465512;465513;465514;465515;465516;465517;465518;465519;465520;465521;465522;465523;465524;465525;465526;465527;465528;465529;465530 368528;368529;368530;368531;368532;368533;368534;368535;368536;368537;368538;368539;368540;368541;368542;368543;368544;368545;368546;368547;368548;368549;368550;368551;368552;368553;368554;368555 368529 26 VELDNMPLRGK Oxidation (M) 1286.6653 0.66527099 2508 Q15233 NONO Non-POU domain-containing octamer-binding protein yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.33 3.93 6 1 8 2 3 2 1 1 1 1 1 1 1 1 37.096 34.826 2;3 0.0091514 37981 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 57.019 26.688 629160000 207840000 114090000 118140000 14235000 0 30034000 24620000 17542000 15789000 29506000 0 0 20620000 0 36757000 55386 2508 49760 465531;465532;465533;465534;465535;465536;465537;465538;465539;465540;465541;465542;465543;465544;465545 368556;368557;368558;368559;368560;368561;368562 368556 4128 3 VELEAALQQAK Unmodified 1198.6558 0.65575216 77 CON__P19013;P19013 KRT4 Keratin, type II cytoskeletal 4 yes no 0 0 0 By MS/MS 10 0 1 1 59.96 60.135 2 0.00062215 68586 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 96.948 69.211 + 5418600 0 0 0 0 0 0 0 5418600 0 0 0 0 0 0 0 55387 77 49761 465546 368563 368563 1 VELEQLK Unmodified 857.48583 0.48583328 4616 Q9NRY5 FAM114A2 Protein FAM114A2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 41.786 41.935 2 0.035265 46732 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 70.912 29.41 280760000 0 0 0 20373000 17130000 25362000 21663000 0 20673000 34305000 0 37203000 40799000 28127000 35129000 55388 4616 49762 465547;465548;465549;465550;465551;465552;465553;465554;465555;465556 368564;368565;368566 368565 3 VELETYK Unmodified 880.4542 0.45419881 3998 Q96T51 RUFY1 RUN and FYVE domain-containing protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 33.272 33.036 2 0.023433 35631 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 85.359 19.687 296290000 0 159740000 0 7750100 6864500 11627000 9427000 10205000 0 13723000 20359000 16510000 11670000 11941000 16472000 55389 3998 49763 465557;465558;465559;465560;465561;465562;465563;465564;465565;465566;465567;465568 368567;368568;368569;368570;368571;368572;368573 368573 7 VELEVTLPGEGK Unmodified 1269.6816 0.68163256 4977 Q9UKV8 AGO2 Protein argonaute-2 yes yes 0 0 0 By MS/MS 2 0 1 1 79.542 74.807 2 0.012642 93221 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.17 49.984 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55390 4977 49764 465569 368574 368574 1 VELGDSDLK Unmodified 974.49204 0.49204087 2935 Q6P4R8 NFRKB Nuclear factor related to kappa-B-binding protein yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 37.349 37.774 2 0.01094 34358 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 63.565 12.599 52483000 0 0 0 0 0 0 0 19730000 5970500 0 0 8855400 9285400 0 8641800 55391 2935 49765 465570;465571;465572;465573;465574 368575;368576;368577;368578 368577 4 VELHSTCQTISVDR Unmodified 1643.7937 0.79371898 136 O00267 SUPT5H Transcription elongation factor SPT5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.469 42.594 3 0.00025175 46674 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 72.175 64.394 124060000 0 0 0 6699000 7198500 11301000 7423800 5026200 6347900 15285000 15107000 23184000 8071900 18415000 0 55392 136 49766 465575;465576;465577;465578;465579;465580;465581;465582;465583;465584;465585;465586 368579;368580;368581;368582;368583;368584 368581 6 VELIHGK Unmodified 794.46504 0.46503826 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20.379 19.643 2 0.029815 20263 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 75.311 28.96 243710000 125020000 25986000 28850000 3960900 4333800 4619800 5411800 4622100 4205700 6642500 5551600 9762700 7757000 6986800 0 55393 2361 49767 465587;465588;465589;465590;465591;465592;465593;465594;465595;465596;465597;465598;465599;465600 368585;368586;368587 368585 3 VELLNQLEEEK Unmodified 1342.698 0.6980109 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 73.698 72.553 2 3.2487E-28 90938 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 194.67 135.99 535770000 16368000 322180000 4112300 8208800 13087000 15103000 10721000 9175700 8662900 19087000 19868000 25631000 13651000 16064000 33851000 55394 1286 49768 465601;465602;465603;465604;465605;465606;465607;465608;465609;465610;465611;465612;465613;465614;465615;465616 368588;368589;368590;368591;368592;368593;368594;368595;368596;368597;368598;368599;368600;368601;368602 368591 15 VELNALMTDETISNVPILILGNK Oxidation (M) 2512.3458 0.34584092 4589 Q9NR31 SAR1A GTP-binding protein SAR1a yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 98.729 94.707 3 4.6358E-05 117006 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 63.674 52.991 27455000 0 27455000 0 0 0 0 0 0 0 0 0 0 0 0 0 55395 4589 49769 465617;465618 368603;368604 368603 5989 2 VELQELNDR Unmodified 1114.5619 0.56185177 870 P08670 VIM Vimentin no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 44.42 44.592 2 1.6396E-50 49683 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 194.2 112.9 3716700000 0 0 0 203870000 230950000 300610000 244460000 187240000 218220000 388330000 374210000 425410000 351330000 317150000 474940000 55396 870 49770 465619;465620;465621;465622;465623;465624;465625;465626;465627;465628;465629;465630 368605;368606;368607;368608;368609;368610;368611;368612;368613;368614;368615;368616;368617;368618;368619;368620;368621;368622;368623;368624;368625;368626;368627;368628;368629;368630;368631;368632;368633;368634;368635;368636;368637;368638;368639;368640;368641;368642;368643;368644;368645;368646;368647;368648;368649;368650;368651;368652;368653;368654;368655;368656;368657;368658;368659 368634 55 VELQELNDRFANYIDK Unmodified 1965.9796 0.97960549 870 P08670 VIM Vimentin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.85 3.86 7 1 12 3 4 1 1 1 1 1 1 1 1 1 1 1 1 1 81.587 80.048 2;3 2.6415E-45 100484 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 149.32 119.52 1089300000 147640000 491640000 6258600 4257100 4695100 20271000 6661500 23327000 29840000 54593000 27251000 26833000 8416000 14924000 222640000 55397 870 49771 465631;465632;465633;465634;465635;465636;465637;465638;465639;465640;465641;465642;465643;465644;465645;465646;465647;465648;465649;465650 368660;368661;368662;368663;368664;368665;368666;368667;368668;368669;368670;368671;368672;368673;368674;368675;368676;368677;368678;368679 368665 18 VELQQGLR Unmodified 941.52943 0.52942943 3622 Q92552 MRPS27 28S ribosomal protein S27, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 35.858 36.061 2 0.022875 39401 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 60.799 28.844 28857000 0 0 0 0 2141300 2617900 0 2302100 1210200 3306500 3187000 0 4565400 3196800 6330000 55398 3622 49772 465651;465652;465653;465654;465655;465656;465657;465658;465659 368680;368681 368680 2 VELRPTTLSEER Unmodified 1428.7573 0.75725712 3004 Q6ZRI6 C15orf39 Uncharacterized protein C15orf39 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 44.579 44.917 3 5.9715E-05 50370 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 74.46 39.256 71998000 0 0 0 0 0 8333200 9436000 12374000 0 0 0 8243700 8969600 14626000 10015000 55399 3004 49773 465660;465661;465662;465663;465664;465665;465666 368682;368683;368684;368685;368686;368687;368688;368689 368685 8 VELRSAVEQVVK Unmodified 1355.7773 0.77726428 2816 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 69.124 63.119 3 0.013912 84129 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.798 22.964 37511000 35282000 0 2229300 0 0 0 0 0 0 0 0 0 0 0 0 55400 2816 49774 465667;465668 368690 368690 1 VELSEQQLQLWPSDVDK Unmodified 2013.0055 0.0054858935 888 P09543 CNP 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 84.848 84.957 2 1.9827E-26 98177 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 136.99 123.56 36741000 0 0 0 0 2726900 0 0 3688900 2268000 5430100 5086100 4368300 0 3017300 10155000 55401 888 49775 465669;465670;465671;465672;465673;465674;465675;465676 368691;368692;368693;368694;368695 368692 3 VELSESEEDK Unmodified 1163.5194 0.51937784 3279 Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 21.294 21.594 2 0.0017421 21379 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.948 80.085 40217000 0 0 0 0 0 6197500 3598100 2844600 4327200 0 8952000 5991500 0 3846100 4459800 55402 3279 49776 465677;465678;465679;465680;465681;465682;465683;465684;465685;465686;465687 368696;368697;368698;368699;368700;368701;368702;368703;368704 368697 9 VELSESR Unmodified 818.4134 0.41339662 1183 P25205 MCM3 DNA replication licensing factor MCM3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.806 15.976 2 0.021005 15585 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 107.43 27.976 384180000 0 0 0 15746000 10031000 30858000 20444000 17666000 12482000 27303000 49360000 55014000 30694000 39269000 75318000 55403 1183 49777 465688;465689;465690;465691;465692;465693;465694;465695;465696;465697;465698;465699 368705;368706;368707;368708;368709;368710;368711;368712;368713;368714;368715 368706 10 VELSESRLK Unmodified 1059.5924 0.59242362 1183 P25205 MCM3 DNA replication licensing factor MCM3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0.632 1 3 1 2 2 1 49.327 46.586 2 7.7521E-05 37918 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 182.53 57.281 269050000 94065000 74250000 100730000 0 0 0 0 0 0 0 0 0 0 0 0 55404 1183 49778 465700;465701;465702;465703;465704 368716;368717;368718;368719;368720 368720 0 VELSNGEK Unmodified 874.43961 0.43961137 2017 P84103 SRSF3 Serine/arginine-rich splicing factor 3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 11.342 11.47 2 0.0096391 10410 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 82.241 16.343 45683000 0 0 0 3476800 3490400 4564500 6063300 4415400 3780400 4880200 4672500 1558700 0 0 8781200 55405 2017 49779 465705;465706;465707;465708;465709;465710;465711;465712;465713;465714 368721;368722;368723;368724;368725 368724 4 VELSPGPPK Unmodified 922.51238 0.51238239 3292 Q8IZ73 RPUSD2 RNA pseudouridylate synthase domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 38.387 34.165 2 0.0065007 44545 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.27 65.019 179320000 0 176150000 3174300 0 0 0 0 0 0 0 0 0 0 0 0 55406 3292 49780 465715;465716 368726 368726 0 VELSPGPPKPAGREVEPAPVGGEHPSAAAPGPGK Unmodified 3238.6735 0.67347449 3292 Q8IZ73 RPUSD2 RNA pseudouridylate synthase domain-containing protein 2 yes yes 0 0 2 By MS/MS 2 0 1 1 63.473 55.204 5 2.1907E-19 74461 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.39 53.779 11667000 11667000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55407 3292 49781 465717 368727 368727 1 VELSPMQK Unmodified 930.48445 0.48445308 2451;2201 Q12873;Q14839 CHD3;CHD4 Chromodomain-helicase-DNA-binding protein 3;Chromodomain-helicase-DNA-binding protein 4 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.504 36.685 2 0.0044886 40500 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 132.09 65.059 283140000 0 0 0 12625000 14853000 23717000 14917000 23528000 13489000 23962000 25602000 34280000 25261000 24165000 46740000 55408 2201;2451 49782 465718;465719;465720;465721;465722;465723;465724;465725;465726;465727;465728;465729 368728;368729;368730;368731;368732;368733;368734;368735;368736;368737;368738;368739 368734 12 VELSQLR Unmodified 843.48142 0.48141661 1466 P42766 RPL35 60S ribosomal protein L35 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43.018 42.497 2 0.0016539 47164 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 155.73 34.443 2769000000 0 48285000 3738400 165920000 179080000 187650000 202550000 188140000 147920000 270250000 271820000 315250000 283590000 201120000 303720000 55409 1466 49783 465730;465731;465732;465733;465734;465735;465736;465737;465738;465739;465740;465741;465742;465743 368740;368741;368742;368743;368744;368745;368746;368747;368748;368749;368750;368751;368752 368746 13 VELSQLRVAK Unmodified 1141.6819 0.68190733 1466 P42766 RPL35 60S ribosomal protein L35 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 56.931 50.949 3 0.003483 69150 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.275 30.848 171840000 155370000 13412000 3058800 0 0 0 0 0 0 0 0 0 0 0 0 55410 1466 49784 465744;465745;465746 368753;368754 368754 2 VELTITPDFQWDEK Unmodified 1719.8356 0.83556702 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 91.146 86.468 2 0.0010053 109039 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 109.24 84.854 132310000 21427000 108060000 2822500 0 0 0 0 0 0 0 0 0 0 0 0 55411 528 49785 465747;465748;465749;465750 368755;368756;368757;368758 368757 4 VELTPVAIQAGR Unmodified 1252.7139 0.71393574 2641 Q16881 TXNRD1 Thioredoxin reductase 1, cytoplasmic yes yes 0 0 0 By matching By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 67.232 67.377 2 0.0061623 77492 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 51.927 15.983 157510000 0 0 0 6250500 0 0 0 0 0 0 36634000 31673000 0 0 82955000 55412 2641 49786 465751;465752;465753;465754 368759;368760 368759 2 VELVFSATPEK Unmodified 1218.6496 0.64960415 2854 Q68CZ2 TNS3 Tensin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 69.798 69.563 2 0.0020604 79646 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 81.338 53.595 58797000 0 3965800 0 1703100 3163900 5100100 4035800 2552900 4119300 5772900 5733600 5698300 4904100 5801600 6246000 55413 2854 49787 465755;465756;465757;465758;465759;465760;465761;465762;465763;465764;465765;465766;465767 368761;368762;368763;368764;368765;368766;368767;368768;368769;368770;368771;368772;368773;368774;368775 368773 15 VELVLSQK Unmodified 914.54368 0.54368251 5054 Q9UPQ0 LIMCH1 LIM and calponin homology domains-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49.196 48.135 2 0.0054455 62001 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 143.11 66.26 532800000 6501100 159670000 3117000 17595000 20632000 31968000 27440000 21964000 22741000 37083000 37633000 35763000 30677000 30736000 49283000 55414 5054 49788 465768;465769;465770;465771;465772;465773;465774;465775;465776;465777;465778;465779;465780;465781;465782 368776;368777;368778;368779;368780;368781;368782;368783;368784 368777 6 VELVTGEEDEK Unmodified 1246.5929 0.59287713 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36.083 35.411 2 4.6752E-05 44006 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.4 53.491 249720000 9715400 46107000 0 10929000 9480700 14279000 11445000 12988000 9590700 16437000 16424000 22230000 21547000 16178000 32366000 55415 1601 49789 465783;465784;465785;465786;465787;465788;465789;465790;465791;465792;465793;465794;465795;465796 368785;368786;368787;368788;368789;368790;368791;368792;368793;368794;368795;368796;368797;368798 368788 14 VEMEMVLQK 2 Oxidation (M) 1137.541 0.54098168 3672 Q92851 CASP10 Caspase-10;Caspase-10 subunit p23/17;Caspase-10 subunit p12 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 22.426 22.697 3 0.0031453 22540 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 59.245 29.502 39212000 0 0 0 16586000 0 0 0 0 0 0 0 0 0 7320000 15306000 55416 3672 49790 465797;465798;465799 368799;368800;368801 368800 5208;5209 2 VEMENQIYAIPEDIMR 2 Oxidation (M) 1981.9125 0.91251349 1702 P52789 HK2 Hexokinase-2 yes yes 0 2 0 By matching By MS/MS By matching By matching By MS/MS By matching 10 0 6 1 1 1 1 1 1 76.89 76.875 2 0.00045659 88903 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 51.218 36.342 18175000 0 0 0 1442900 1985800 0 0 0 2533400 0 3932900 4688700 0 3590800 0 55417 1702 49791 465800;465801;465802;465803;465804;465805 368802 368802 2751;2752 1 VEMLDNLLDIEVAYSLLRGGSDDSSK Unmodified 2838.3957 0.39570423 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 0 1 By MS/MS 2 0 1 1 101.46 93.33 3 4.0908E-126 120152 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 160.88 141.15 21985000 21985000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55418 894 49792 465806 368803;368804 368803 2 VEMLDNLLDIEVAYSLLRGGSDDSSKDPIDVNYEK Unmodified 3911.8986 0.89864415 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 0 2 By MS/MS 2 0 1 1 100.77 92.644 4 1.6357E-42 119349 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.858 83.542 21729000 21729000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55419 894 49793 465807 368805 368805 1 VEMLETERGQQEAK Unmodified 1646.7934 0.79338463 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 29.451 29.675 3 0.0023288 32346 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 48.14 17.313 68093000 0 0 0 5560700 0 4761200 8038400 6366500 0 7742000 0 11958000 11457000 0 12209000 55420 2459 49794 465808;465809;465810;465811;465812;465813;465814;465815 368806;368807;368808;368809;368810 368806 4 VEMLETERGQQEAK Oxidation (M) 1662.7883 0.78829925 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 1 1 By matching By matching By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 18.878 19.183 3 0.0030922 19517 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 41.401 19.642 13349000 0 0 0 0 0 0 0 1821300 0 2951800 0 0 2757700 2669600 3148600 55421 2459 49794 465816;465817;465818;465819;465820 368811 368811 4050 1 VEMPSFK Unmodified 836.41023 0.4102255 3226 Q8IVF2 AHNAK2 Protein AHNAK2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 54.585 54.262 2 0.029674 69170 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.407 74.561 144550000 0 60926000 0 8016000 3991000 4541800 6684000 7419500 4399600 5823200 9336100 10919000 8587100 4568300 9337400 55422 3226 49795 465821;465822;465823;465824;465825;465826;465827;465828;465829;465830;465831;465832;465833 368812;368813 368812 2 VEMQPTELVSK Unmodified 1259.6431 0.64313856 334 O43491 EPB41L2 Band 4.1-like protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 61.227 55.352 2 0.001052 71092 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.239 63.077 56639000 0 56639000 0 0 0 0 0 0 0 0 0 0 0 0 0 55423 334 49796 465834 368814 368814 1 VENAARKLEAMTNSK Unmodified 1660.8567 0.85665359 1073 P18206 VCL Vinculin yes yes 0 0 2 By MS/MS 2 0 1 1 49.528 41.703 3 0.042638 57726 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 37.352 18.066 10980000 10980000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55424 1073 49797 465835 368815 368815 1 VENACYALK Unmodified 1066.5117 0.51173046 4031 Q99598 TSNAX Translin-associated protein X yes yes 0 0 0 By MS/MS 2 0 1 1 35.916 31.068 2 0.007613 40582 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.523 72.697 235420000 0 235420000 0 0 0 0 0 0 0 0 0 0 0 0 0 55425 4031 49798 465836 368816 368816 1 VENETDEGDK Unmodified 1134.4677 0.46767662 3687 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 yes yes 0 0 0 By MS/MS 1 0 1 1 5.5642 22.709 2 0.010734 3129 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 73.985 64.074 2375400 0 2375400 0 0 0 0 0 0 0 0 0 0 0 0 0 55426 3687 49799 465837 368817 368817 1 VENFEAAVHFYGK Unmodified 1509.7252 0.72522871 364 O43765 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.33 2.98 5 1 1 1 3 1 76.249 72.651 2;3 0.00063778 92048 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.412 59.041 203360000 103230000 58296000 32935000 0 0 0 0 0 0 0 0 0 0 0 8899300 55427 364 49800 465838;465839;465840;465841;465842;465843 368818;368819;368820;368821;368822;368823;368824 368818 6 VENFFTLYNVK Unmodified 1372.7027 0.70270235 1543 P48553 TRAPPC10 Trafficking protein particle complex subunit 10 yes yes 0 0 0 By MS/MS 2 0 1 1 91.5 83.37 2 0.0069184 108191 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.749 62.963 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55428 1543 49801 465844 368825 368825 1 VENFHEEHEK Unmodified 1296.5735 0.57347909 3107 Q7Z5K2 WAPAL Wings apart-like protein homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 10.712 7.5237 3 0.0074848 9380 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 61.56 52.453 75173000 14048000 16823000 44302000 0 0 0 0 0 0 0 0 0 0 0 0 55429 3107 49802 465845;465846;465847;465848 368826;368827;368828 368827 3 VENFIQK Unmodified 876.47052 0.47051757 1554 P48739 PITPNB Phosphatidylinositol transfer protein beta isoform yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS 8.33 3.13 1 1 7 1 1 1 1 1 1 1 1 1 34.33 33.187 2 0.012413 42657 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.37 31.681 1426900000 947410 1352700000 0 7563900 5602900 18430000 9417000 6180100 0 15698000 0 0 10366000 0 0 55430 1554 49803 465849;465850;465851;465852;465853;465854;465855;465856;465857 368829;368830;368831;368832 368831 4 VENGEGTIPVESSDIVPTWDGIR Unmodified 2469.2023 0.2023478 1766 P55265 ADAR Double-stranded RNA-specific adenosine deaminase yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 87.095 87.228 3 0.0044326 100913 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 26.21 23.112 5576800 0 0 0 0 0 0 0 0 0 2547300 0 0 0 0 3029500 55431 1766 49804 465858;465859 368833 368833 1 VENGQEPVIK Unmodified 1111.5873 0.58733824 1766 P55265 ADAR Double-stranded RNA-specific adenosine deaminase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 25.414 25.271 2 0.0014968 26894 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 90.709 31.504 116640000 0 17780000 0 5955000 5938000 8021800 7273000 7694000 4438700 7095200 7564900 9948400 11437000 8024300 15469000 55432 1766 49805 465860;465861;465862;465863;465864;465865;465866;465867;465868;465869;465870;465871;465872 368834;368835;368836;368837;368838;368839;368840;368841;368842;368843;368844;368845;368846;368847 368835 12 VENLALK Unmodified 785.4647 0.46470391 2547 Q15545 TAF7 Transcription initiation factor TFIID subunit 7 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.01 33.195 2 0.02335 36899 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 89.903 9.3478 130360000 0 0 0 8333200 8357000 10901000 7656900 6704700 9149200 14539000 17348000 3165100 15451000 8389100 20365000 55433 2547 49806 465873;465874;465875;465876;465877;465878;465879;465880;465881;465882;465883;465884 368848;368849;368850;368851;368852 368852 5 VENLFMGNSFGITPTLDK Oxidation (M) 1997.9768 0.9768283 3520 Q8TEU7 RAPGEF6 Rap guanine nucleotide exchange factor 6 yes yes 0 1 0 By MS/MS By matching By MS/MS By matching 10 0 4 1 1 1 1 86.939 87.089 2 0.0004072 100968 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 51.774 39.214 12336000 0 0 0 0 0 0 0 0 0 2788900 1948500 3551900 0 0 4046700 55434 3520 49807 465885;465886;465887;465888 368853;368854 368853 5021 2 VENLFNEK Unmodified 991.49746 0.4974606 1977 P78347 GTF2I General transcription factor II-I yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 45.634 44.361 2 0.0045353 49426 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 130.27 41.129 3334200000 60910000 906120000 17156000 147460000 137590000 187740000 126560000 137840000 139750000 252920000 204490000 226550000 248530000 199760000 340830000 55435 1977 49808 465889;465890;465891;465892;465893;465894;465895;465896;465897;465898;465899;465900;465901;465902;465903;465904 368855;368856;368857;368858;368859;368860;368861;368862;368863;368864;368865;368866;368867;368868;368869;368870;368871;368872;368873;368874;368875;368876;368877;368878 368866 19 VENLLGISSLEK Unmodified 1300.7238 0.72383172 3558 Q8WVB3 HEXDC Hexosaminidase D yes yes 0 0 0 By MS/MS 2 0 1 1 84.445 79.701 2 0.0010708 99117 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.403 51.111 23348000 0 23348000 0 0 0 0 0 0 0 0 0 0 0 0 0 55436 3558 49809 465905 368879 368879 1 VENLLLEAEK Unmodified 1156.634 0.63395408 455 O75116 ROCK2 Rho-associated protein kinase 2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 67.702 67.663 2 0.023831 77326 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 70.908 30.907 20949000 0 0 0 0 0 20949000 0 0 0 0 0 0 0 0 0 55437 455 49810 465906;465907 368880;368881 368881 1 VENLLLSNQGTIK Unmodified 1427.7984 0.79839365 234 O14976 GAK Cyclin-G-associated kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 69.203 68.897 2 8.5859E-06 87843 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.93 81.953 436280000 0 131370000 0 13191000 18410000 22129000 22165000 23123000 17448000 25232000 29588000 36045000 29621000 29162000 38793000 55438 234 49811 465908;465909;465910;465911;465912;465913;465914;465915;465916;465917;465918;465919;465920 368882;368883;368884;368885;368886;368887;368888;368889;368890;368891;368892;368893;368894;368895 368885 14 VENLVDQLNK Unmodified 1170.6245 0.62445203 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 2 1 1 1 1 1 1 1 55.116 55.25 2 0.0001734 62550 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 161.79 111.09 378300000 0 0 0 17293000 20193000 26455000 28373000 34800000 32491000 32133000 35543000 31923000 38503000 36247000 44345000 55439 2556 49812 465921;465922;465923;465924;465925;465926;465927;465928;465929;465930;465931;465932;465933 368896;368897;368898;368899;368900;368901;368902;368903;368904;368905;368906;368907;368908;368909 368906 14 VENMVDQLLR Unmodified 1215.6282 0.6281572 1441 P41252 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 79.577 79.541 2 0.003784 91463 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.886 53.491 80653000 0 0 0 4784000 6286500 0 0 0 0 0 0 11484000 0 19382000 38717000 55440 1441 49813 465934;465935;465936;465937;465938 368910;368911;368912;368913;368914;368915 368911 6 VENMVDQLLR Oxidation (M) 1231.6231 0.62307182 1441 P41252 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 60.252 60.294 2 0.0036307 69123 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 68.657 34.86 40888000 0 0 0 3860800 0 0 0 0 0 11260000 0 16738000 9029000 0 0 55441 1441 49813 465939;465940;465941;465942 368916;368917;368918 368916 2272 3 VENNLIVDK Unmodified 1042.5659 0.56587452 2360 Q14004 CDK13 Cyclin-dependent kinase 13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 36.962 37.421 2 0.034406 41589 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 66.504 16.935 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55442 2360 49814 465943;465944;465945 368919;368920;368921 368921 3 VENPLEEAVK Unmodified 1126.587 0.58700389 2895 Q6N069 NAA16 N-alpha-acetyltransferase 16, NatA auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 60.986 61.017 2 0.0025237 70271 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 82.749 62.229 167880000 0 0 0 6524000 10357000 7620200 9194000 16395000 8569400 25726000 28663000 54836000 0 0 0 55443 2895 49815 465946;465947;465948;465949;465950;465951;465952;465953;465954 368922;368923;368924;368925;368926;368927;368928;368929;368930;368931;368932;368933;368934 368933 12 VENSDLLEQEAK Unmodified 1373.6674 0.66743906 5315 yes yes 0 0 0 By MS/MS By MS/MS 10 0 4 3 1 63.302 63.48 2 0.0048358 73363 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 56.258 19.863 + 122230000 0 0 0 0 0 0 0 116310000 0 0 0 0 5917300 0 0 55444 5315 49816 465955;465956;465957;465958 368935;368936 368936 2 VENSIPAAGETQNVEVAAGPAGK Unmodified 2208.1022 0.10223983 2475 Q15020 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 2 1 1 2 2 2 2 2 2 2 2 60.142 60.309 2;3 1.6327E-13 68959 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 56.247 40.993 144560000 0 0 0 2586800 2599200 3412800 12655000 8611700 0 16605000 4802200 21383000 24343000 18052000 29514000 55445 2475 49817 465959;465960;465961;465962;465963;465964;465965;465966;465967;465968;465969;465970;465971;465972;465973;465974;465975;465976;465977;465978 368937;368938;368939;368940;368941;368942;368943;368944;368945;368946;368947;368948;368949 368946 11 VENSNTVRTPEENGNLGK Unmodified 1956.9501 0.95009628 2390 Q14202 ZMYM3 Zinc finger MYM-type protein 3 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 32.795 28.288 3 2.3773E-10 37169 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.45 87.173 18344000 0 18344000 0 0 0 0 0 0 0 0 0 0 0 0 0 55446 2390 49818 465979;465980 368950 368950 1 VENSPQVDGSPPGLEGLLGGIGEK Unmodified 2348.186 0.18596945 3559 Q8WVB6 CHTF18 Chromosome transmission fidelity protein 18 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 1 1 2 1 2 1 2 1 2 2 89.869 89.986 2;3 5.5404E-08 104663 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 53.777 48.794 46033000 0 0 0 0 1788800 1708700 1217500 3495000 1851500 8290400 4814500 6263100 1335900 4080000 11187000 55447 3559 49819 465981;465982;465983;465984;465985;465986;465987;465988;465989;465990;465991;465992;465993;465994;465995;465996 368951;368952;368953;368954;368955;368956;368957;368958;368959;368960;368961;368962;368963 368962 13 VENTLLGLGK Unmodified 1042.6023 0.60226003 3037 Q76L83 ASXL2 Putative Polycomb group protein ASXL2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 63.591 62.92 2 0.0047175 81067 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.294 31.573 87430000 0 21868000 0 0 3264200 5578200 5898900 4561100 3728100 7382200 7093200 7248200 9048100 4590100 7169200 55448 3037 49820 465997;465998;465999;466000;466001;466002;466003;466004;466005;466006;466007;466008;466009 368964;368965;368966;368967;368968;368969;368970;368971;368972 368967 9 VENTRWDYLTQVEK Unmodified 1779.8792 0.87916317 4497 Q9HB71 CACYBP Calcyclin-binding protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 2 1 1 1 1 1 1 1 2 69.25 68.272 2;3 1.6244E-18 87959 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.34 87.654 730060000 284880000 216460000 36520000 0 0 46858000 0 9949600 10356000 16819000 12486000 12183000 9918100 14994000 58630000 55449 4497 49821 466010;466011;466012;466013;466014;466015;466016;466017;466018;466019;466020;466021;466022;466023 368973;368974;368975;368976;368977;368978;368979;368980;368981;368982;368983;368984;368985;368986;368987;368988 368976 16 VEPADASGTEK Unmodified 1102.5142 0.51423288 1561 P49189 ALDH9A1 4-trimethylaminobutyraldehyde dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 9.6485 9.781 2 0.00053902 8227 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 81.95 56.214 61324000 0 0 0 6353200 992660 1678600 2257100 2344500 1052500 1995900 11944000 8689300 3144700 5055300 15816000 55450 1561 49822 466024;466025;466026;466027;466028;466029;466030;466031;466032;466033;466034;466035 368989;368990;368991;368992;368993;368994;368995;368996;368997;368998;368999 368997 10 VEPAPAANSLGLGLK Unmodified 1435.8035 0.80347903 202 O14686 KMT2D Histone-lysine N-methyltransferase 2D yes yes 0 0 0 By MS/MS 2 0 1 1 78.032 73.257 2 0.0065631 91436 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 56.951 35.504 15654000 0 15654000 0 0 0 0 0 0 0 0 0 0 0 0 0 55451 202 49823 466036 369000 369000 1 VEPATPLAVR Unmodified 1051.6026 0.60259438 4370 Q9H2M9 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.155 49.313 2 0.00164 55843 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 94.114 63.929 341500000 0 0 0 23635000 18602000 31788000 26089000 26623000 22053000 26669000 31186000 33686000 32817000 32871000 35485000 55452 4370 49824 466037;466038;466039;466040;466041;466042;466043;466044;466045;466046;466047;466048 369001;369002;369003;369004;369005;369006;369007;369008;369009;369010;369011;369012;369013;369014;369015 369001 15 VEPAVDTSR Unmodified 972.48762 0.4876242 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching 10 0 5 1 1 1 1 1 17.955 18.406 2 0.025904 18665 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 50.04 8.5381 81492000 0 0 0 0 0 0 0 0 0 0 12668000 14413000 9400600 12720000 32290000 55453 487 49825 466049;466050;466051;466052;466053 369016;369017;369018 369018 3 VEPAVDTSRIK Unmodified 1213.6667 0.6666512 487 O75369 FLNB Filamin-B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 37.286 32.332 3 0.021178 42411 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 37.327 22.867 701810000 55106000 535290000 111410000 0 0 0 0 0 0 0 0 0 0 0 0 55454 487 49826 466054;466055;466056 369019;369020 369019 1 VEPAVIEAQNAVK Unmodified 1366.7456 0.7456298 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 3 1 61.033 55.308 2;3 0.00063431 71577 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 61.03 46.251 1005200000 16240000 979880000 9040700 0 0 0 0 0 0 0 0 0 0 0 0 55455 2392 49827 466057;466058;466059;466060;466061 369021;369022;369023;369024;369025 369023 5 VEPCNDHVRAK Unmodified 1323.6354 0.63536784 2954 Q6PII5 HAGHL Hydroxyacylglutathione hydrolase-like protein yes yes 0 0 1 By MS/MS 2 0 1 1 9.9567 6.182 3 0.00052124 10128 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 91.937 80.405 46669000 46669000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55456 2954 49828 466062 369026 369026 1 VEPCSLTPGYTK Unmodified 1350.649 0.64895222 3807 Q96EB1 ELP4 Elongator complex protein 4 yes yes 0 0 0 By MS/MS By matching By MS/MS 6.25 3.77 1 1 2 2 1 1 48.652 46.093 2 0.002157 59012 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.817 59.243 88658000 0 81186000 0 0 0 0 0 0 0 3573400 0 0 0 3898800 0 55457 3807 49829 466063;466064;466065;466066 369027;369028;369029 369028 3 VEPFLPGHYEVLDLK Unmodified 1754.9243 0.92432245 864 P08243 ASNS Asparagine synthetase [glutamine-hydrolyzing] yes yes 0 0 0 By MS/MS 2 0 1 1 91.317 86.406 3 0.017472 107352 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 33.842 23.848 20319000 0 20319000 0 0 0 0 0 0 0 0 0 0 0 0 0 55458 864 49830 466067 369030 369030 1 VEPFLPGHYEVLDLKPNGK Unmodified 2151.1364 0.13644049 864 P08243 ASNS Asparagine synthetase [glutamine-hydrolyzing] yes yes 0 0 1 By MS/MS 10 0 1 1 80.597 80.812 4 0.036266 93074 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 15.481 12.548 12565000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12565000 55459 864 49831 466068 369031 369031 1 VEPGEPAK Unmodified 825.42323 0.42323303 3360 Q8N6N3 C1orf52 UPF0690 protein C1orf52 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 9.1877 9.3447 2 0.02509 6980 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.981 4.456 28021000 0 0 0 0 1432200 2760200 2145600 1912600 0 1897700 2359900 6145100 2834700 2124800 4407800 55460 3360 49832 466069;466070;466071;466072;466073;466074;466075;466076;466077;466078 369032;369033;369034 369032 3 VEPGLGADNSVVR Unmodified 1311.6783 0.67827852 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 47.598 46.98 2 1.0444E-09 53912 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 132.32 100.38 1577200000 0 283340000 0 56436000 58933000 106170000 72670000 59443000 54045000 99166000 157890000 162620000 92358000 101050000 273110000 55461 1124 49833 466079;466080;466081;466082;466083;466084;466085;466086;466087;466088;466089;466090;466091;466092;466093;466094 369035;369036;369037;369038;369039;369040;369041;369042;369043;369044;369045;369046;369047;369048;369049;369050;369051;369052;369053 369052 19 VEPHATIAEIK Unmodified 1206.6608 0.66083754 4756 Q9NZ01 TECR Very-long-chain enoyl-CoA reductase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.67 1.6 1 23 1 2 2 2 2 2 1 2 2 2 2 2 2 39.835 39.776 2;3 0.0003968 44135 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 66.267 48.208 506290000 0 59843000 0 29167000 28058000 28878000 30689000 33954000 23795000 45436000 45614000 65009000 44118000 36593000 35132000 55462 4756 49834 466095;466096;466097;466098;466099;466100;466101;466102;466103;466104;466105;466106;466107;466108;466109;466110;466111;466112;466113;466114;466115;466116;466117;466118 369054;369055;369056;369057;369058;369059;369060;369061;369062;369063;369064;369065;369066;369067;369068 369055 15 VEPIPAIGHATLGTASR Unmodified 1688.921 0.9209684 2051 Q01167 FOXK2 Forkhead box protein K2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.178 68.257 3 4.5577E-05 77359 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 75.018 68.986 159240000 0 0 0 6744200 7170400 10855000 11189000 8266400 9438600 15679000 19661000 13901000 14806000 15606000 25922000 55463 2051 49835 466119;466120;466121;466122;466123;466124;466125;466126;466127;466128;466129;466130 369069;369070;369071;369072;369073;369074;369075;369076;369077;369078;369079;369080;369081 369076 13 VEPLDFGGTQK Unmodified 1189.5979 0.59790293 845 P07686 HEXB Beta-hexosaminidase subunit beta;Beta-hexosaminidase subunit beta chain B;Beta-hexosaminidase subunit beta chain A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.824 55.95 2 4.1749E-05 64691 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 136.57 120.92 100870000 0 0 0 19125000 6880900 5280000 4822800 8769100 3875000 8529200 8752800 11740000 5912500 6898400 10281000 55464 845 49836 466131;466132;466133;466134;466135;466136;466137;466138;466139;466140;466141;466142 369082;369083;369084;369085;369086;369087;369088;369089;369090;369091;369092 369091 11 VEPLEEAIPLPPTK Unmodified 1531.8498 0.84976052 286 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 7.86 3.4 1 1 5 2 1 1 1 1 1 84.117 82.948 2 0.0016079 96433 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 56.783 46.025 67985000 0 51493000 0 2012400 2249100 0 3256500 0 0 0 0 0 0 4941200 4033000 55465 286 49837 466143;466144;466145;466146;466147;466148;466149 369093;369094;369095;369096 369095 4 VEPLLLLK Unmodified 923.60555 0.60555449 4571 Q9NQG7 HPS4 Hermansky-Pudlak syndrome 4 protein yes yes 0 0 0 By MS/MS 2 0 1 1 89.108 84.235 2 0.03028 104704 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.035 17.867 10940000 0 10940000 0 0 0 0 0 0 0 0 0 0 0 0 0 55466 4571 49838 466150 369097 369097 1 VEPLRNELQK Unmodified 1224.6826 0.68263561 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 1 By MS/MS 2 0 1 1 43.319 38.171 3 0.023167 49562 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 40.994 0 27409000 0 27409000 0 0 0 0 0 0 0 0 0 0 0 0 0 55467 2392 49839 466151 369098 369098 1 VEPMTYLGSSQNEVLNTKPDYQK Unmodified 2640.2741 0.27413253 4388 Q9H410 DSN1 Kinetochore-associated protein DSN1 homolog yes yes 0 0 1 By MS/MS 2 0 1 1 79.083 74.347 3 8.7929E-08 92664 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 57.068 44.011 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55468 4388 49840 466152 369099 369099 1 VEPPKEEQK Unmodified 1082.5608 0.56078914 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 0 1 By matching By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 10.214 7.0276 2 0.0023842 10242 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.02 76.055 492290000 38512000 453090000 691050 0 0 0 0 0 0 0 0 0 0 0 0 55469 1337 49841 466153;466154;466155;466156 369100;369101;369102;369103;369104 369103 5 VEPPTPQEPGPAK Unmodified 1345.6878 0.68778057 2990 Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein yes yes 0 0 0 By matching By MS/MS By matching By matching 10 0 4 1 1 1 1 37.155 37.161 2 0.011979 41161 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 42.336 20.343 9629500 0 0 0 0 1633700 3661100 0 0 1805400 0 0 0 2529300 0 0 55470 2990 49842 466157;466158;466159;466160 369105 369105 1 VEPSDNGPLFTELK Unmodified 1544.7722 0.77223848 4076 Q99986 VRK1 Serine/threonine-protein kinase VRK1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.18 3.29 3 1 13 1 2 1 1 1 1 2 1 1 1 1 1 1 1 1 77.226 76.168 2 7.5491E-19 87789 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 125.74 88.265 602150000 13979000 454650000 3699300 7011400 6551100 10386000 13591000 6018300 6888500 12464000 13729000 13438000 8707800 11007000 20028000 55471 4076 49843 466161;466162;466163;466164;466165;466166;466167;466168;466169;466170;466171;466172;466173;466174;466175;466176;466177 369106;369107;369108;369109;369110;369111;369112;369113;369114;369115;369116;369117;369118;369119;369120 369110 14 VEPVGNAPLLALVHK Unmodified 1555.9086 0.9086128 2424 Q14669 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 82.842 82.904 3 0.03226 96023 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 28.146 25.583 40168000 0 0 0 1393000 1377800 3544800 1727400 3123900 1986600 3774200 3487800 9329400 0 2923300 7500000 55472 2424 49844 466178;466179;466180;466181;466182;466183;466184;466185;466186;466187;466188 369121 369121 1 VEPYSLTAQQSSLIREDK Unmodified 2063.0535 0.053498719 4002 Q96T88 UHRF1 E3 ubiquitin-protein ligase UHRF1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 66.516 66.241 3 1.6993E-53 75987 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 140.02 108.2 203420000 0 15984000 0 7855000 9227300 15872000 12211000 13873000 15106000 17792000 21423000 14962000 10514000 17467000 31136000 55473 4002 49845 466189;466190;466191;466192;466193;466194;466195;466196;466197;466198;466199;466200;466201 369122;369123;369124;369125;369126;369127;369128;369129;369130;369131;369132;369133;369134;369135;369136;369137 369125 16 VEQANNARDALAK Unmodified 1398.7215 0.72154031 5014 Q9UM54 MYO6 Unconventional myosin-VI yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 22.508 19.094 3 0.0042331 25298 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.628 39.771 48178000 0 40737000 7440900 0 0 0 0 0 0 0 0 0 0 0 0 55474 5014 49846 466202;466203 369138;369139 369138 2 VEQATKPSFESGR Unmodified 1434.7103 0.71030693 1395 P38159 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.625 23.829 3 0.0001363 24527 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 78.486 53.144 274730000 0 0 0 24095000 30784000 14465000 25879000 20196000 13163000 20026000 20804000 29731000 19721000 19409000 36456000 55475 1395 49847 466204;466205;466206;466207;466208;466209;466210;466211;466212;466213;466214;466215 369140;369141;369142;369143;369144;369145;369146;369147;369148;369149;369150;369151;369152 369145 8 VEQATKPSFESGRR Unmodified 1590.8114 0.81141795 1395 P38159 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed yes yes 0 0 2 By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 18.616 18.842 3 0.0035056 18547 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 78.763 44.584 32360000 0 0 0 2799200 0 2707100 2519200 3125600 1793200 2508400 3103000 4138400 2838600 0 6827000 55476 1395 49848 466216;466217;466218;466219;466220;466221;466222;466223;466224;466225 369153;369154;369155 369155 3 VEQDLAMGTDAEGEK Unmodified 1591.7036 0.70356657 1857 P61764 STXBP1 Syntaxin-binding protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 39.896 40.058 2 7.3686E-06 44802 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 81.92 64.484 7195800 0 0 0 0 0 4523900 0 0 0 0 0 0 0 2671900 0 55477 1857 49849 466226;466227;466228 369156;369157 369156 2 VEQDLAMGTDAEGEK Oxidation (M) 1607.6985 0.69848119 1857 P61764 STXBP1 Syntaxin-binding protein 1 yes yes 0 1 0 By MS/MS 10 0 1 1 27.674 27.677 2 3.676E-08 29883 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 95.401 78.769 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55478 1857 49849 466229 369158 369158 3012 1 VEQESLLTAFR Unmodified 1291.6772 0.67721588 4831 Q9UBB4 ATXN10 Ataxin-10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.486 78.544 2 2E-08 90680 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 150.85 54.143 135270000 0 0 0 9606400 5734600 10595000 6643200 9494300 5162500 19273000 14025000 7883500 7155000 11405000 28295000 55479 4831 49850 466230;466231;466232;466233;466234;466235;466236;466237;466238;466239;466240;466241 369159;369160;369161;369162;369163;369164;369165;369166;369167;369168;369169;369170 369160 12 VEQFLTIAR Unmodified 1075.6026 0.60259438 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.045 69.124 2 2.4812E-05 79401 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 138.1 67.83 280520000 0 0 0 16371000 21379000 20398000 21654000 21898000 17356000 25383000 25842000 36833000 15695000 24332000 33382000 55480 4139 49851 466242;466243;466244;466245;466246;466247;466248;466249;466250;466251;466252;466253 369171;369172;369173;369174;369175;369176;369177;369178;369179;369180;369181;369182;369183 369173 4 VEQFVHK Unmodified 885.47085 0.47085192 4964 Q9UKF7 PITPNC1 Cytoplasmic phosphatidylinositol transfer protein 1 yes yes 0 0 0 By matching By MS/MS By matching By matching 10 0 4 1 1 1 1 15.277 15.629 2 0.033465 14794 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 71.949 12.308 14981000 0 0 0 0 0 0 0 0 1338400 0 4783400 0 0 2633400 6225300 55481 4964 49852 466254;466255;466256;466257 369184 369184 1 VEQHVVDGK Unmodified 1009.5193 0.51925868 5168 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 9.0074 7.2447 2 0.0016618 9450 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.23 81.825 762750000 21964000 710050000 5105900 4687300 0 0 0 0 0 0 0 0 7561500 0 13380000 55482 5168 49853 466258;466259;466260;466261;466262;466263;466264;466265;466266;466267;466268;466269;466270;466271 369185;369186;369187;369188;369189;369190;369191;369192;369193;369194;369195;369196;369197;369198 369188 14 VEQIEAGTPGR Unmodified 1155.5884 0.58840088 2641 Q16881 TXNRD1 Thioredoxin reductase 1, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 27.705 27.549 2 0.00010237 29848 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 127.4 78.603 335300000 0 6120100 0 5991100 10648000 10237000 12204000 7471800 8915000 9895600 48435000 48944000 12123000 39340000 114980000 55483 2641 49854 466272;466273;466274;466275;466276;466277;466278;466279;466280;466281;466282;466283;466284 369199;369200;369201;369202;369203;369204;369205;369206;369207;369208;369209;369210 369199 11 VEQLAVR Unmodified 813.47085 0.47085192 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 27.292 27.267 2 0.033465 29456 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 71.949 20.377 82112000 0 0 0 0 28522000 0 0 31894000 21696000 0 0 0 0 0 0 55484 1601 49855 466285;466286;466287 369211;369212;369213 369213 3 VEQLGAEGNVEESQK Unmodified 1615.7689 0.76894402 5141 Q9Y383 LUC7L2 Putative RNA-binding protein Luc7-like 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33.074 32.434 2 3.1983E-49 34744 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 194.7 168.58 884920000 10246000 14897000 0 53594000 61613000 65118000 57826000 60973000 52321000 87482000 84336000 83917000 83863000 74793000 93945000 55485 5141 49856 466288;466289;466290;466291;466292;466293;466294;466295;466296;466297;466298;466299;466300;466301 369214;369215;369216;369217;369218;369219;369220;369221;369222;369223;369224;369225;369226;369227;369228;369229;369230;369231;369232 369219 19 VEQLQQEYTEMK Unmodified 1524.713 0.71300904 2401 Q14258 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 51.497 49.783 2 2.4072E-28 56815 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 173.32 133.32 273270000 4447200 190200000 0 4884500 5035300 0 0 0 0 10463000 0 0 9881100 11486000 36872000 55486 2401 49857 466302;466303;466304;466305;466306;466307;466308;466309;466310;466311;466312 369233;369234;369235;369236;369237;369238;369239;369240;369241;369242;369243;369244 369240 11 VEQLQQEYTEMK Oxidation (M) 1540.7079 0.70792366 2401 Q14258 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes yes 0 1 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 7.86 3.4 1 1 5 2 1 1 1 1 1 37.977 36.33 2 7.7303E-07 45568 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.89 88.851 85177000 0 60241000 0 6205900 0 7465100 0 5999500 5265500 0 0 0 0 0 0 55487 2401 49857 466313;466314;466315;466316;466317;466318;466319 369245;369246;369247;369248 369245 3935 4 VEQMFQILLDPEEK Oxidation (M) 1733.8546 0.8545879 4387 Q9H3U1 UNC45A Protein unc-45 homolog A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 5 3.56 1 1 1 1 1 1 85.187 83.591 2 2.0931E-06 99899 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 105.46 88.547 6507600 0 2705500 0 0 0 3802100 0 0 0 0 0 0 0 0 0 55488 4387 49858 466320;466321;466322 369249;369250;369251;369252 369251 5846 4 VEQMFQILLDPEEK Unmodified 1717.8597 0.85967328 4387 Q9H3U1 UNC45A Protein unc-45 homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 3.8 3.12 3 1 1 1 3 1 95.988 91.829 2;3 3.3438E-18 115033 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 122.39 99.156 161310000 21664000 137480000 0 0 0 0 0 0 0 0 0 0 0 0 2161800 55489 4387 49858 466323;466324;466325;466326;466327 369253;369254;369255;369256;369257 369257 4 VEQNSEPCAGSSSESDLQTVFK Unmodified 2398.0594 0.059448312 3367 Q8N806 UBR7 Putative E3 ubiquitin-protein ligase UBR7 yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 72.707 67.672 2;3 5.6457E-21 85907 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.769 71.982 23959000 0 23959000 0 0 0 0 0 0 0 0 0 0 0 0 0 55490 3367 49859 466328;466329;466330 369258;369259 369259 2 VEQQILK Unmodified 856.50182 0.5018177 488 O75376;Q9H4R4 NCOR1;NCOR1P1 Nuclear receptor corepressor 1;Putative nuclear receptor corepressor 1-like protein NCOR1P1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.105 26.306 2 0.02335 28067 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 89.903 32.8 149560000 0 0 0 8566000 9159800 12523000 10572000 8443200 8500600 12775000 10472000 17328000 18092000 12682000 20448000 55491 488 49860 466331;466332;466333;466334;466335;466336;466337;466338;466339;466340;466341;466342 369260;369261;369262;369263 369261 4 VEQTETPEMMEAR 2 Oxidation (M) 1581.6651 0.66507257 1694 P52701 MSH6 DNA mismatch repair protein Msh6 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 17.621 17.817 2 0.00018409 17396 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 77.64 67.117 24767000 0 0 0 0 2225900 4649200 0 0 0 3229400 2770200 11893000 0 0 0 55492 1694 49861 466343;466344;466345;466346;466347 369264;369265;369266;369267;369268 369267 2746;2747 5 VEQTETPEMMEAR Unmodified 1549.6752 0.67524333 1694 P52701 MSH6 DNA mismatch repair protein Msh6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.599 43.776 2 1.9123E-13 47955 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 140.39 128.53 142510000 0 0 0 8068800 5165800 9590800 6407300 8519900 0 20729000 15523000 14625000 15697000 9660900 28523000 55493 1694 49861 466348;466349;466350;466351;466352;466353;466354;466355;466356;466357;466358;466359 369269;369270;369271;369272;369273;369274;369275;369276;369277;369278;369279;369280;369281;369282 369272 14 VEQVLSLEPQHELK Unmodified 1647.8832 0.88318591 638 O95292 VAPB Vesicle-associated membrane protein-associated protein B/C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 65.331 64.531 3 0.00082254 73253 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 47.545 40.487 149600000 0 57993000 5593200 4817200 8245400 12402000 8752600 7533600 7851900 0 0 15308000 8381900 0 12726000 55494 638 49862 466360;466361;466362;466363;466364;466365;466366;466367;466368;466369;466370 369283;369284;369285;369286;369287;369288;369289;369290;369291 369290 9 VEQVPCSRADVFNSK Unmodified 1734.8359 0.83591814 1204;1172 P26374;P24386 CHML;CHM Rab proteins geranylgeranyltransferase component A 2;Rab proteins geranylgeranyltransferase component A 1 no no 0 0 1 By MS/MS 2 0 1 1 49.604 45.689 3 0.0067071 57415 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 58.071 38.233 26013000 0 0 26013000 0 0 0 0 0 0 0 0 0 0 0 0 55495 1204;1172 49863 466371 369292 369292 1 VERADGYEPPVQESV Unmodified 1673.7897 0.78967946 1842 P61247 RPS3A 40S ribosomal protein S3a yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.05 3.87 1 5 1 12 2 4 1 1 1 1 1 1 1 1 1 1 1 1 1 57.735 56.286 2 1.5357E-33 61592 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 151.7 140.79 3580700000 60637000 2380100000 8422800 78473000 86066000 62012000 91779000 74758000 68610000 90494000 89556000 122210000 126050000 106130000 135450000 55496 1842 49864 466372;466373;466374;466375;466376;466377;466378;466379;466380;466381;466382;466383;466384;466385;466386;466387;466388;466389;466390 369293;369294;369295;369296;369297;369298;369299;369300;369301;369302;369303;369304;369305;369306;369307;369308;369309;369310;369311;369312;369313;369314;369315;369316;369317;369318;369319;369320 369320 28 VERDIGEGNLSTAAAAALAAAAVK Unmodified 2268.2074 0.2073736 3475 Q8TAQ2 SMARCC2 SWI/SNF complex subunit SMARCC2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 88.318 86.807 3 5.6566E-09 100821 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.802 55.132 30729000 4905200 0 0 0 0 0 0 0 0 7805100 2632900 0 0 1522700 13863000 55497 3475 49865 466391;466392;466393;466394;466395 369321;369322;369323;369324 369322 4 VEREDVVFLYLIEMDSQLPGK Unmodified 2479.2669 0.26686231 4825 Q9P2R3 ANKFY1 Rabankyrin-5 yes yes 0 0 1 By MS/MS 2 0 1 1 100.61 92.481 3 3.6271E-09 119124 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.248 77.626 11349000 11349000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55498 4825 49866 466396 369325;369326 369325 2 VEREERAEESIEDIYANIPDLPK Unmodified 2714.3399 0.33990391 4538 Q9NP74 PALMD Palmdelphin yes yes 0 0 2 By MS/MS By MS/MS 2.5 0.5 2 2 3 1 90.059 84.303 3;4 1.0191E-12 107779 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.975 47.003 87042000 84838000 2204100 0 0 0 0 0 0 0 0 0 0 0 0 0 55499 4538 49867 466397;466398;466399;466400 369327;369328;369329;369330 369328 3 VEREIDGGLETLR Unmodified 1485.7787 0.77872084 1394 P38117 ETFB Electron transfer flavoprotein subunit beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 51.878 52.019 3 1.1144E-09 59179 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 103.14 87.749 128210000 0 0 0 8861800 6514000 21027000 12832000 12095000 8681300 0 11921000 13676000 14720000 0 17886000 55500 1394 49868 466401;466402;466403;466404;466405;466406;466407;466408;466409;466410 369331;369332;369333;369334;369335;369336;369337;369338;369339;369340;369341;369342 369336 12 VEREIDGGLETLRLK Unmodified 1726.9577 0.95774784 1394 P38117 ETFB Electron transfer flavoprotein subunit beta yes yes 0 0 2 By MS/MS 2 0 1 1 75.248 67.117 4 0.014875 88556 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 33.796 20.383 18092000 18092000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55501 1394 49869 466411 369343 369343 1 VERFPDLAAEK Unmodified 1273.6667 0.6666512 3185 Q86WR0 CCDC25 Coiled-coil domain-containing protein 25 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.4 3.68 4 1 10 1 3 1 1 1 1 1 1 1 1 1 1 1 53.724 51.877 2;3 0.0017241 68432 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.731 41.445 307550000 32626000 153740000 7498200 5941400 3525000 15985000 5121300 6973600 0 19300000 13964000 0 8749800 11489000 22636000 55502 3185 49870 466412;466413;466414;466415;466416;466417;466418;466419;466420;466421;466422;466423;466424;466425;466426 369344;369345;369346;369347;369348;369349;369350;369351;369352;369353;369354 369346 9 VERLSSGPEQITLEASSTEGHPGAPSPQHTDQTEAFQK Unmodified 4045.9253 0.92534468 2940 Q6P996 PDXDC1 Pyridoxal-dependent decarboxylase domain-containing protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 73.775 65.579 5 3.5422E-08 86891 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.066 38.49 13685000 13685000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55503 2940 49871 466427 369355 369355 1 VERQFSTASDHEQPGVSG Unmodified 1929.8817 0.88168236 2843 Q66K14 TBC1D9B TBC1 domain family member 9B yes yes 0 0 1 By MS/MS 2 0 1 1 34.255 30.948 3 0.011866 39063 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 25.824 15.485 5110100 0 0 5110100 0 0 0 0 0 0 0 0 0 0 0 0 55504 2843 49872 466428 369356 369356 1 VERQVFGEATK Unmodified 1262.6619 0.66190017 839 P07339 CTSD Cathepsin D;Cathepsin D light chain;Cathepsin D heavy chain yes yes 0 0 1 By MS/MS By MS/MS 2 0 4 2 2 30.616 26.118 2;3 9.5325E-07 36667 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.38 86.008 121940000 80780000 0 41163000 0 0 0 0 0 0 0 0 0 0 0 0 55505 839 49873 466429;466430;466431;466432 369357;369358;369359;369360 369359 4 VERSQVPNEK Unmodified 1184.6149 0.61494998 4206 Q9BW91 NUDT9 ADP-ribose pyrophosphatase, mitochondrial yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 11.337 8.0114 3 0.014042 11240 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 59.265 19.416 155750000 0 155750000 0 0 0 0 0 0 0 0 0 0 0 0 0 55506 4206 49874 466433;466434 369361;369362 369361 1 VESDLKGPEVDIEGPEGK Unmodified 1896.9317 0.93165225 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 58.638 58.716 3 0.0010374 67098 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 47.088 30.595 25799000 0 0 0 6349900 0 0 0 0 3918200 3794400 0 5297000 6439700 0 0 55507 2172 49875 466435;466436;466437;466438;466439 369363;369364;369365;369366 369364 4 VESEENDQTFSEK Unmodified 1540.6529 0.65291121 3196 Q86XK3 SFR1 Swi5-dependent recombination DNA repair protein 1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.083 23.289 2 3.6561E-10 24329 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 117.67 113.37 51890000 0 0 0 4036700 3589000 6684200 2852100 2848800 2376000 3771700 4857100 5001000 5769900 3281800 6822100 55508 3196 49876 466440;466441;466442;466443;466444;466445;466446;466447;466448;466449;466450;466451 369367;369368;369369;369370;369371;369372;369373;369374;369375;369376;369377;369378;369379 369376 13 VESEIKVPDVELK Unmodified 1483.8134 0.81337501 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 71.057 70.973 3 0.010809 81874 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 29.355 24.217 21006000 0 0 0 2854700 2737200 0 0 0 0 0 0 6277800 5238000 3898100 0 55509 2172 49877 466452;466453;466454;466455;466456 369380;369381;369382 369380 2 VESELRSICTTVLELLDK Unmodified 2104.1086 0.10857076 1214 P27348 YWHAQ 14-3-3 protein theta yes yes 0 0 1 By MS/MS By MS/MS 2.67 0.471 1 2 1 2 100.5 96.603 3 5.4847E-05 119458 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.012 60.933 14116000 1897900 12218000 0 0 0 0 0 0 0 0 0 0 0 0 0 55510 1214 49878 466457;466458;466459 369383;369384 369383 2 VESEQQYFEIEK Unmodified 1527.7093 0.70930387 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 61.671 60.703 2 7.278E-78 76578 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 223.31 160.1 1103000000 563880 704540000 0 15191000 16420000 27765000 21931000 23253000 22472000 37712000 37093000 42996000 37862000 34727000 80523000 55511 965 49879 466460;466461;466462;466463;466464;466465;466466;466467;466468;466469;466470;466471;466472;466473;466474;466475 369385;369386;369387;369388;369389;369390;369391;369392;369393;369394;369395;369396;369397;369398;369399;369400 369388 15 VESESYRK Unmodified 996.48762 0.4876242 4914 Q9UHY7 ENOPH1 Enolase-phosphatase E1 yes yes 0 0 1 By MS/MS 2 0 1 1 6.6747 3.4316 2 0.008893 5545 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.74 57.704 94811000 0 94811000 0 0 0 0 0 0 0 0 0 0 0 0 0 55512 4914 49880 466476 369401 369401 1 VESGGPGTSAASAR Unmodified 1245.5949 0.59494282 4157 Q9BU76 MMTAG2 Multiple myeloma tumor-associated protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 12.587 12.717 2 0.00054619 11876 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 67.385 43.956 21668000 0 0 0 1482500 1699100 1781100 1835800 1632200 1157900 2404900 2019600 3070300 3265400 1319000 0 55513 4157 49881 466477;466478;466479;466480;466481;466482;466483;466484;466485;466486;466487 369402;369403;369404;369405;369406;369407;369408;369409;369410;369411 369411 10 VESKGNSPPSSGEACREEK Unmodified 2046.9276 0.92764628 1435 P41227 NAA10 N-alpha-acetyltransferase 10 yes yes 0 0 2 By MS/MS 10 0 1 1 7.9823 8.1836 4 0.00020239 6429 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.589 45.424 5330900 0 0 0 0 0 0 0 0 0 0 0 5330900 0 0 0 55514 1435 49882 466488 369412 369412 1 VESLDVDSEAK Unmodified 1190.5667 0.56666238 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.94 3.58 1 3 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 39.484 38.689 2 2.6041E-09 102285 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 142.43 115.83 1340100000 86851000 458720000 0 35901000 18639000 44928000 32171000 30525000 33634000 57273000 95463000 82629000 53371000 85986000 224030000 55515 1564 49883 466489;466490;466491;466492;466493;466494;466495;466496;466497;466498;466499;466500;466501;466502;466503;466504 369413;369414;369415;369416;369417;369418;369419;369420;369421;369422;369423;369424;369425;369426;369427 369423 13 VESLESLYFTPIPAR Unmodified 1720.9036 0.903587 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 88.493 88.601 2 1.1367E-26 102819 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 125.74 100.95 50130000 0 0 0 0 1688300 3857400 2406100 3261800 5241800 6510100 4642100 6851100 1993700 2835200 10842000 55516 2459 49884 466505;466506;466507;466508;466509;466510;466511;466512;466513;466514;466515 369428;369429;369430;369431;369432;369433;369434;369435;369436;369437;369438;369439 369433 12 VESLESQTR Unmodified 1047.5197 0.51965261 391 O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 17.869 18.057 2 0.0035134 18281 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 107.66 50.384 63345000 0 0 0 3863400 2929400 4863300 3518500 3273300 2928200 5650500 7590800 5945500 5207800 5392600 12181000 55517 391 49885 466516;466517;466518;466519;466520;466521;466522;466523;466524;466525;466526;466527 369440;369441;369442;369443;369444;369445;369446;369447;369448;369449;369450;369451 369441 12 VESLLNEMK Unmodified 1061.5427 0.54269624 1575 P49454 CENPF Centromere protein F yes yes 0 0 0 By MS/MS 2 0 1 1 68.116 62.217 2 0.014201 79298 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.279 52.094 21136000 0 21136000 0 0 0 0 0 0 0 0 0 0 0 0 0 55518 1575 49886 466528 369452 369452 1 VESLQEEIAFLK Unmodified 1404.75 0.75004648 870 P08670 VIM Vimentin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.51 3.66 11 2 28 4 7 2 2 2 2 2 2 2 3 2 3 2 3 3 86.668 85.779 2;3 9.8301E-45 108490 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 204.5 137.17 7576700000 198370000 3840800000 87215000 46327000 145160000 231550000 124390000 225460000 242540000 506000000 312960000 289560000 166500000 247530000 912410000 55519 870 49887 466529;466530;466531;466532;466533;466534;466535;466536;466537;466538;466539;466540;466541;466542;466543;466544;466545;466546;466547;466548;466549;466550;466551;466552;466553;466554;466555;466556;466557;466558;466559;466560;466561;466562;466563;466564;466565;466566;466567;466568;466569 369453;369454;369455;369456;369457;369458;369459;369460;369461;369462;369463;369464;369465;369466;369467;369468;369469;369470;369471;369472;369473;369474;369475;369476;369477;369478;369479;369480;369481;369482;369483;369484;369485;369486;369487;369488;369489;369490;369491;369492;369493;369494;369495;369496;369497;369498 369466 40 VESLSQEAER Unmodified 1146.5517 0.55168102 3554 Q8WUX9 CHMP7 Charged multivesicular body protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 16 1 1 1 1 2 1 1 2 2 1 1 2 24.007 24.285 2 0.0014074 24790 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 109.11 78.423 157330000 0 0 0 10050000 7390700 10973000 8173000 10337000 10429000 7667300 17566000 20181000 13770000 7461900 33335000 55520 3554 49888 466570;466571;466572;466573;466574;466575;466576;466577;466578;466579;466580;466581;466582;466583;466584;466585 369499;369500;369501;369502;369503;369504;369505;369506;369507;369508;369509 369503 8 VESLSQEAERCK Unmodified 1434.6773 0.67729224 3554 Q8WUX9 CHMP7 Charged multivesicular body protein 7 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 27.946 24.244 3 0.0028937 31873 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.806 57.776 39352000 0 32407000 6945000 0 0 0 0 0 0 0 0 0 0 0 0 55521 3554 49889 466586;466587 369510;369511 369510 1 VESLVALLNNSSEMK Oxidation (M) 1648.8342 0.83418681 500 O75448 MED24 Mediator of RNA polymerase II transcription subunit 24 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 85.071 83.869 2 0.00039131 96784 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 68.069 59.556 4369400 0 0 1707900 0 0 2661500 0 0 0 0 0 0 0 0 0 55522 500 49890 466588;466589;466590;466591;466592;466593;466594 369512;369513;369514;369515;369516;369517;369518 369514 651 7 VESPGTYQQDPWAMTDEEK Unmodified 2209.9474 0.94737867 123 O00170 AIP AH receptor-interacting protein yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 70.986 69.912 2 8.0094E-87 86788 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 211.13 196.1 132920000 0 116790000 0 0 0 0 0 0 0 3479800 5074800 0 0 0 7573000 55523 123 49891 466595;466596;466597;466598 369519;369520;369521 369519 3 VESPVLPPVLVPR Unmodified 1400.8391 0.83913625 4053;2580 Q99717;Q15797 SMAD5;SMAD1 Mothers against decapentaplegic homolog 5;Mothers against decapentaplegic homolog 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 86.621 86.727 2 0.0066061 100887 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 55.461 45.457 32032000 0 0 0 0 3522700 2448900 3492900 2088700 2120100 2499800 3995200 0 6095400 2642100 3126400 55524 4053;2580 49892 466599;466600;466601;466602;466603;466604;466605;466606;466607;466608 369522;369523;369524 369524 2 VESQSSFGTLR Unmodified 1209.599 0.59896556 400 O60443 DFNA5 Non-syndromic hearing impairment protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 40.335 40.584 2 0.0003091 44002 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 111.61 77.81 38852000 0 0 0 0 2092700 3289400 3612100 2810400 0 5418200 5529000 4010700 5126300 0 6963300 55525 400 49893 466609;466610;466611;466612;466613;466614;466615;466616;466617 369525;369526;369527;369528;369529;369530 369527 6 VESQSSFGTLRK Unmodified 1337.6939 0.69392858 400 O60443 DFNA5 Non-syndromic hearing impairment protein 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 29.395 29.543 3 0.021244 31903 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 26.753 13.616 69528000 0 0 0 0 6194500 0 0 0 0 19285000 0 0 0 0 44048000 55526 400 49894 466618;466619;466620 369531 369531 1 VESSVVRIEPK Unmodified 1241.698 0.69795133 5040 Q9UNQ2 DIMT1 Probable dimethyladenosine transferase yes yes 0 0 1 By MS/MS 2 0 1 1 40.671 37.061 3 0.022404 46777 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 48.188 36.13 17281000 0 0 17281000 0 0 0 0 0 0 0 0 0 0 0 0 55527 5040 49895 466621 369532 369532 1 VESTGAVPEFK Unmodified 1162.587 0.58700389 2997 Q6YN16 HSDL2 Hydroxysteroid dehydrogenase-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching 8 3.46 1 3 1 1 1 1 47.11 47.386 2 0.0086935 53522 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.268 27.113 11548000 0 0 0 0 0 4811200 0 0 0 0 3423300 0 3313300 0 0 55528 2997 49896 466622;466623;466624;466625 369533;369534 369533 2 VESVVIK Unmodified 772.46945 0.46945494 4773 Q9NZM1 MYOF Myoferlin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 3 1 46.343 41.94 2 0.02175 53087 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 108.98 49.342 824790000 78580000 706970000 39244000 0 0 0 0 0 0 0 0 0 0 0 0 55529 4773 49897 466626;466627;466628;466629;466630 369535;369536;369537 369537 3 VETAESRVSVLESMIDDLQWDIDK Unmodified 2777.3429 0.34294038 2816 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 0 0 1 By MS/MS 2 0 1 1 100.99 92.86 3 6.7782E-123 119561 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 172.42 145.57 30242000 30242000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55530 2816 49898 466631 369538;369539 369539 2 VETDHIVAAVGLEPNVELAK Unmodified 2103.1212 0.12118435 697 O95831 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 83.862 80.367 3 2.1656E-05 95948 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 53.453 49.733 26212000 0 23664000 2547800 0 0 0 0 0 0 0 0 0 0 0 0 55531 697 49899 466632;466633;466634 369540;369541;369542;369543 369541 3 VETEAEDAALDCSVNSR Unmodified 1864.8109 0.81088519 2777 Q5T5X7 BEND3 BEN domain-containing protein 3 yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 47.634 47.632 2 1.2025E-10 53623 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 90.926 85.541 22780000 0 0 0 1846600 1872900 3502600 3054400 0 1743000 3385100 4001600 0 0 3374000 0 55532 2777 49900 466635;466636;466637;466638;466639;466640;466641;466642;466643 369544;369545;369546;369547 369544 4 VETELQGVCDTVLGLLDSHLIK Unmodified 2438.2727 0.27267597 1312 P31947 SFN 14-3-3 protein sigma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.5 0.5 2 2 1 2 1 101.21 97.662 3 0 116792 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 235.35 221.89 282760000 3276200 275190000 4293800 0 0 0 0 0 0 0 0 0 0 0 0 55533 1312 49901 466644;466645;466646;466647 369548;369549;369550;369551;369552;369553;369554;369555;369556;369557 369550 9 VETEYAR Unmodified 866.4134 0.41339662 1235 P28347;Q15561;Q99594 TEAD1;TEAD4;TEAD3 Transcriptional enhancer factor TEF-1;Transcriptional enhancer factor TEF-3;Transcriptional enhancer factor TEF-5 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 13.472 13.551 2 0.025177 12623 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 81.297 50.685 56680000 0 0 0 4979400 8513700 0 10881000 0 0 8593000 0 0 0 9382800 14330000 55534 1235 49902 466648;466649;466650;466651;466652;466653 369558;369559;369560;369561 369561 4 VETFSGVYK Unmodified 1028.5179 0.51786169 1871 P62081 RPS7 40S ribosomal protein S7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.25 3.7 3 2 3 2 2 1 1 1 1 48.689 45.384 2 0.00039119 58750 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.02 45.387 3526000000 75669000 2936100000 71306000 0 0 0 108130000 0 0 0 0 149250000 0 0 185510000 55535 1871 49903 466654;466655;466656;466657;466658;466659;466660;466661 369562;369563;369564;369565;369566;369567;369568;369569 369562 7 VETFSGVYKK Unmodified 1156.6128 0.61282471 1871 P62081 RPS7 40S ribosomal protein S7 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 35.384 34.766 3 0.010248 38026 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 34.692 20.486 264730000 109780000 0 29286000 7388100 6918400 0 9180900 10241000 3953400 10945000 22359000 14294000 12861000 9942400 17586000 55536 1871 49904 466662;466663;466664;466665;466666;466667;466668;466669;466670;466671;466672;466673;466674 369570;369571;369572;369573;369574;369575;369576;369577 369571 7 VETFSSLK Unmodified 909.48075 0.48074791 3182 Q86WB0 ZC3HC1 Nuclear-interacting partner of ALK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 41.23 41.324 2 0.0089203 45634 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 84.568 49.074 74989000 0 0 0 0 8866200 15506000 9911400 11069000 7497800 0 11826000 0 0 10312000 0 55537 3182 49905 466675;466676;466677;466678;466679;466680;466681 369578;369579;369580;369581;369582 369580 5 VETGSEPGDTEPLELGGPGAEPEQK Unmodified 2522.166 0.16602187 5206 Q9Y4L1 HYOU1 Hypoxia up-regulated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.3 3.41 1 1 8 1 1 1 1 1 1 1 1 1 1 71.591 70.786 3 4.497E-23 75425 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.312 77.508 83164000 11475000 26365000 0 5385900 3478200 0 3916300 0 0 6451900 7484000 0 0 5092400 13515000 55538 5206 49906 466682;466683;466684;466685;466686;466687;466688;466689;466690;466691 369583;369584;369585;369586;369587;369588;369589;369590;369591;369592;369593;369594 369585 12 VETGVLKPGMVVTFAPVNVTTEVK Oxidation (M) 2530.3717 0.37166174 1960 P68104;Q5VTE0 EEF1A1;EEF1A1P5 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3 yes no 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 2 1 1 1 1 1 2 1 1 1 1 2 83.769 83.81 2;3 1.3445E-103 96577 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 170.27 162.47 2396800000 0 0 0 65899000 126620000 46442000 62027000 172460000 51538000 660770000 371810000 210170000 24384000 85938000 518730000 55539 1960 49907 466692;466693;466694;466695;466696;466697;466698;466699;466700;466701;466702;466703;466704;466705;466706 369595;369596;369597;369598;369599;369600;369601;369602;369603;369604;369605;369606;369607;369608;369609;369610;369611;369612 369600 3146 18 VETGVLKPGMVVTFAPVNVTTEVK Unmodified 2514.3767 0.37674711 1960 P68104;Q5VTE0 EEF1A1;EEF1A1P5 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 87.434 87.476 3 1.9373E-06 101674 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 47.728 45.005 67872000 0 0 0 5081700 3015900 2211500 0 6095700 0 8798400 10255000 8112800 0 2190800 22109000 55540 1960 49907 466707;466708;466709;466710;466711;466712;466713;466714;466715 369613;369614;369615;369616;369617 369617 5 VETLREEAPTDLR Unmodified 1527.7893 0.78928553 4691 Q9NW68 BSDC1 BSD domain-containing protein 1 yes yes 0 0 1 By MS/MS By matching 10 0 2 1 1 46.448 46.562 3 0.033068 52911 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 20.783 9.0742 15356000 0 0 0 0 2657200 0 0 0 0 0 0 12699000 0 0 0 55541 4691 49908 466716;466717 369618 369618 1 VETLSPESALQGSPR Unmodified 1569.7999 0.79985021 4073 Q99958 FOXC2 Forkhead box protein C2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 63.743 63.747 2 0.00025839 72225 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.911 60.238 17237000 0 0 0 2210600 1739500 0 3176400 0 0 0 3378400 0 0 2163500 4568800 55542 4073 49909 466718;466719;466720;466721;466722;466723 369619;369620;369621 369620 2 VETPHVTIEDAQHR Unmodified 1630.8063 0.80633258 2770 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 2 1 1 1 1 2 1 1 40.79 40.974 3;4 0.00085379 45806 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 44.457 34.463 113550000 0 0 0 9033200 8787700 5752800 10985000 0 7040400 11151000 8945500 10413000 16022000 10592000 14826000 55543 2770 49910 466724;466725;466726;466727;466728;466729;466730;466731;466732;466733;466734;466735;466736 369622;369623;369624;369625;369626;369627;369628;369629;369630;369631 369630 10 VETPLEEAIK Unmodified 1127.6074 0.60740498 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 65.91 64.577 2 1.8745E-09 74000 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 157.91 114.1 7877200000 32011000 987470000 19458000 9957300 18015000 24585000 371850000 573270000 399390000 1356100000 1686300000 2343700000 11420000 13215000 30445000 55544 4226 49911 466737;466738;466739;466740;466741;466742;466743;466744;466745;466746;466747;466748;466749;466750;466751;466752 369632;369633;369634;369635;369636;369637;369638;369639;369640;369641;369642;369643;369644;369645;369646;369647;369648;369649;369650;369651;369652;369653;369654;369655;369656;369657;369658;369659;369660 369642 27 VETPVLPPVLVPR Unmodified 1414.8548 0.85478632 2579;2010 Q15796;P84022 SMAD2;SMAD3 Mothers against decapentaplegic homolog 2;Mothers against decapentaplegic homolog 3 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 88.184 88.254 2;3 2.9329E-08 102604 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 132.01 127.86 669630000 0 0 0 20798000 36985000 56327000 41449000 43879000 37679000 74499000 76649000 76852000 47235000 53194000 104090000 55545 2579;2010 49912 466753;466754;466755;466756;466757;466758;466759;466760;466761;466762;466763;466764;466765;466766;466767;466768;466769;466770;466771;466772;466773;466774;466775;466776 369661;369662;369663;369664;369665;369666;369667;369668;369669;369670;369671;369672;369673;369674;369675;369676;369677;369678;369679;369680;369681;369682 369678 18 VETSDEEIHDLHQR Unmodified 1706.786 0.78599106 834 P07099 EPHX1 Epoxide hydrolase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 1 2 2 1 2 2 2 2 2 2 2 28.768 29.014 3;4 1.1023E-19 30268 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 116.84 96.731 303620000 0 0 0 12112000 7296400 33451000 13625000 10360000 23712000 29626000 27817000 36800000 36637000 38278000 33903000 55546 834 49913 466777;466778;466779;466780;466781;466782;466783;466784;466785;466786;466787;466788;466789;466790;466791;466792;466793;466794;466795;466796;466797 369683;369684;369685;369686;369687;369688;369689;369690;369691;369692;369693;369694;369695;369696;369697 369692 15 VETTEDLVAK Unmodified 1103.571 0.57101948 1394 P38117 ETFB Electron transfer flavoprotein subunit beta yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 39.708 33.891 2 1.0281E-05 44279 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.06 84.711 139150000 53434000 85717000 0 0 0 0 0 0 0 0 0 0 0 0 0 55547 1394 49914 466798;466799 369698 369698 1 VETTVTSLK Unmodified 976.54408 0.54407645 2642 Q16890 TPD52L1 Tumor protein D53 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 32.674 32.81 2 0.011541 36397 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 101.64 53.14 241640000 0 0 0 20661000 18634000 21689000 15571000 19669000 12954000 26235000 28755000 33287000 25773000 18414000 0 55548 2642 49915 466800;466801;466802;466803;466804;466805;466806;466807;466808;466809;466810 369699;369700;369701;369702;369703;369704;369705 369705 3 VETVSQPSESPK Unmodified 1286.6354 0.63541065 4030 Q99590 SCAF11 Protein SCAF11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 21.635 21.843 2 9.3082E-27 22886 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 169.37 100.64 111410000 0 0 0 7708500 5983500 9311200 7893500 0 6607500 12476000 10805000 12373000 13828000 12086000 12336000 55549 4030 49916 466811;466812;466813;466814;466815;466816;466817;466818;466819;466820;466821 369706;369707;369708;369709;369710;369711;369712;369713;369714;369715;369716;369717;369718;369719 369706 14 VETYLNENLRK Unmodified 1377.7252 0.72522871 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 2 2 41.1 41.382 2;3 0.00030076 45848 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 69.346 54.246 224590000 0 0 0 0 9912700 24039000 14037000 19030000 12664000 23180000 18061000 25810000 15570000 20724000 41561000 55550 5071 49917 466822;466823;466824;466825;466826;466827;466828;466829;466830;466831;466832;466833;466834 369720;369721;369722;369723;369724;369725;369726;369727;369728;369729 369726 9 VETYNDESR Unmodified 1111.4782 0.47818172 1221 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 11.928 12.152 2 0.0037946 10999 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 111.95 99.591 67976000 0 0 0 0 0 13633000 0 5809800 0 13843000 7121500 0 6638000 8428800 12501000 55551 1221 49918 466835;466836;466837;466838;466839;466840;466841 369730;369731;369732;369733;369734;369735 369734 6 VETYNDESRIK Unmodified 1352.6572 0.65720872 1221 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 25.333 21.566 3 0.0043198 26902 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 73.499 60.492 537070000 0 512510000 24553000 0 0 0 0 0 0 0 0 0 0 0 0 55552 1221 49919 466842;466843;466844 369736;369737;369738;369739 369738 4 VEVAHISGGE Unmodified 996.48762 0.4876242 674 O95625 ZBTB11 Zinc finger and BTB domain-containing protein 11 yes yes 0 0 0 By MS/MS 2 0 1 1 35.305 30.548 2 0.003971 39869 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.853 36.412 10644000 0 10644000 0 0 0 0 0 0 0 0 0 0 0 0 0 55553 674 49920 466845 369740 369740 1 VEVDMEK Oxidation (M) 864.38988 0.38988399 3714;1504 Q969G3;P46459 SMARCE1;NSF SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1;Vesicle-fusing ATPase no no 0 1 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 9.0709 9.2602 2 0.024576 7974 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 69.998 32.353 14289000 0 0 0 0 0 0 4332200 0 0 0 3812300 0 6144300 0 0 55554 3714;1504 49921 466846;466847;466848 369741 369741 1 VEVDMEK Unmodified 848.39497 0.39496937 3714;1504 Q969G3;P46459 SMARCE1;NSF SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1;Vesicle-fusing ATPase no no 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 23.717 23.909 2 0.031655 25165 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 73.616 29.085 176940000 0 0 0 11570000 11456000 11115000 11019000 8789500 7551600 17601000 22593000 18925000 0 18563000 37759000 55555 3714;1504 49921 466849;466850;466851;466852;466853;466854;466855;466856;466857;466858;466859 369742;369743 369743 2 VEVEEVTVPEGFVQK Unmodified 1687.8669 0.86686715 3300 Q8N0W3 FUK L-fucose kinase yes yes 0 0 0 By MS/MS 3 0 1 1 79.875 76.543 2 0.00045199 91901 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 93.258 67.319 7319200 0 7319200 0 0 0 0 0 0 0 0 0 0 0 0 0 55556 3300 49922 466860 369744 369744 1 VEVERDNLAEDIMR Unmodified 1687.8199 0.81993373 870 P08670 VIM Vimentin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 2 2 1 1 2 1 2 1 2 1 2 56.494 56.616 3 0.0016635 76646 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 70.98 63.941 609560000 0 0 0 15665000 20085000 53748000 21505000 37627000 42780000 51409000 68130000 63391000 48835000 40984000 145400000 55557 870 49923 466861;466862;466863;466864;466865;466866;466867;466868;466869;466870;466871;466872;466873;466874;466875;466876;466877;466878 369745;369746;369747;369748;369749;369750;369751;369752;369753;369754 369750 6 VEVERDNLAEDIMR Oxidation (M) 1703.8148 0.81484835 870 P08670 VIM Vimentin yes yes 0 1 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 21 2 1 2 2 1 2 2 2 2 2 2 1 51.453 51.607 2;3 0.00010999 58474 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 78.505 64.074 1019600000 0 0 0 77114000 9063400 82285000 107940000 60811000 68806000 113750000 109550000 159900000 122370000 87795000 20233000 55558 870 49923 466879;466880;466881;466882;466883;466884;466885;466886;466887;466888;466889;466890;466891;466892;466893;466894;466895;466896;466897;466898;466899 369755;369756;369757;369758;369759;369760;369761;369762;369763;369764;369765;369766 369757 1115 11 VEVETSGIGDSLLNVK Unmodified 1658.8727 0.87268081 464 O75152 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.58 1.79 1 18 1 1 2 2 2 2 1 1 2 1 1 2 1 79.723 79.784 2;3 2.9099E-45 91940 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 188.91 150.82 234280000 0 0 0 4657600 16307000 16072000 14779000 16703000 12821000 25077000 26176000 28894000 20335000 19416000 33037000 55559 464 49924 466900;466901;466902;466903;466904;466905;466906;466907;466908;466909;466910;466911;466912;466913;466914;466915;466916;466917;466918 369767;369768;369769;369770;369771;369772;369773;369774;369775;369776;369777;369778;369779;369780 369770 12 VEVFEHAVNNTAGDDLAK Unmodified 1927.9276 0.92756992 1454 P42345 MTOR Serine/threonine-protein kinase mTOR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 60.158 58.824 3 9.5216E-29 73298 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 115.15 105.87 141340000 9294500 50151000 12411000 4610300 3740400 6278800 4164000 3792900 3639300 6711900 8731900 7800900 6009600 6170800 7833700 55560 1454 49925 466919;466920;466921;466922;466923;466924;466925;466926;466927;466928;466929;466930;466931;466932;466933;466934 369781;369782;369783;369784;369785;369786;369787;369788;369789;369790;369791;369792 369789 12 VEVGLSSCQGDYIR Unmodified 1581.7457 0.74570615 384 O60231 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 61.903 62.157 2 0.004448 70247 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.198 31.185 85523000 0 0 0 0 0 10886000 0 3001300 5701600 6906600 11843000 9495700 5057100 8007300 24625000 55561 384 49926 466935;466936;466937;466938;466939;466940;466941;466942;466943 369793;369794;369795;369796 369794 4 VEVITGEEAESNVLQMQCK Oxidation (M) 2179.0137 0.013684093 4428 Q9H6Z4 RANBP3 Ran-binding protein 3 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 71.55 66.391 2 1.8238E-05 84346 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.55 69.989 30633000 0 30633000 0 0 0 0 0 0 0 0 0 0 0 0 0 55562 4428 49927 466944;466945 369797 369797 5879 1 VEVITGEEAESNVLQMQCK Unmodified 2163.0188 0.018769471 4428 Q9H6Z4 RANBP3 Ran-binding protein 3 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 78.454 74.377 2 0 92458 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 289.38 273.99 85934000 0 85934000 0 0 0 0 0 0 0 0 0 0 0 0 0 55563 4428 49927 466946;466947 369798 369798 1 VEVKEEEESSSNGTASQSTSPSQPR Unmodified 2649.2002 0.20017555 3662 Q92793 CREBBP CREB-binding protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 24.862 25.328 3 1.3957E-09 25748 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.857 44.17 22453000 0 0 0 0 0 0 0 0 0 3196500 2917700 4514000 3072300 0 8752200 55564 3662 49928 466948;466949;466950;466951;466952 369799;369800;369801;369802;369803;369804 369800 6 VEVLEAK Unmodified 786.44872 0.4487195 5224 Q9Y592 CEP83 Centrosomal protein of 83 kDa yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 24.392 19.789 2 0.032506 26381 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.512 7.8966 134600000 10358000 124250000 0 0 0 0 0 0 0 0 0 0 0 0 0 55565 5224 49929 466953;466954 369805 369805 1 VEVLNSDAVLPSR Unmodified 1397.7514 0.75144346 3722 Q969R5 L3MBTL2 Lethal(3)malignant brain tumor-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 68.3 68.144 2 0.00054263 78261 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 78.342 59.071 5831300 0 0 0 0 2968000 0 0 2863300 0 0 0 0 0 0 0 55566 3722 49930 466955;466956;466957;466958;466959;466960 369806;369807;369808;369809;369810;369811 369809 6 VEVLPALTDNYMYLVIDDETK Unmodified 2440.2083 0.20834438 2635 Q16775 HAGH Hydroxyacylglutathione hydrolase, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 98.69 90.559 3 0.042608 116850 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 19.868 11.987 6843700 6843700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55567 2635 49931 466961 369812 369812 1 VEVLPQAR Unmodified 910.52362 0.52361577 2039 Q00587 CDC42EP1 Cdc42 effector protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 1 1 1 2 2 1 1 38.691 38.924 2 0.014173 42854 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 70.912 47.893 262000000 0 0 0 12941000 14240000 15136000 19982000 17053000 14320000 28678000 30138000 40961000 23423000 16237000 28891000 55568 2039 49932 466962;466963;466964;466965;466966;466967;466968;466969;466970;466971;466972;466973;466974;466975 369813;369814;369815;369816;369817;369818 369815 6 VEVNDRQGFVPAAYVK Unmodified 1790.9315 0.93153309 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 71.754 65.849 3 5.9896E-05 85150 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.746 62.955 74170000 26553000 0 47617000 0 0 0 0 0 0 0 0 0 0 0 0 55569 2344 49933 466976;466977;466978 369819;369820;369821 369819 3 VEVNNLNNLNNHDRK Unmodified 1791.8976 0.8976072 2312 Q13542 EIF4EBP2 Eukaryotic translation initiation factor 4E-binding protein 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 37.909 32.407 3;4 1.0745E-13 44975 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 114.63 102.14 134050000 121090000 0 12966000 0 0 0 0 0 0 0 0 0 0 0 0 55570 2312 49934 466979;466980;466981 369822;369823;369824;369825 369823 3 VEVQLPELFHK Unmodified 1337.7343 0.73433683 2266 Q13303 KCNAB2 Voltage-gated potassium channel subunit beta-2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 87.762 81.292 3 0.0079423 102848 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 44.299 35.493 27665000 6939800 20725000 0 0 0 0 0 0 0 0 0 0 0 0 0 55571 2266 49935 466982;466983 369826;369827 369826 2 VEVSQPEADLPLPK Unmodified 1520.8086 0.80862399 3226 Q8IVF2 AHNAK2 Protein AHNAK2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 9.2 2.4 1 9 1 1 1 2 1 1 1 1 1 75.292 74.856 2 0.00081952 92346 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.655 54.412 51123000 0 19330000 0 3644500 2740300 0 7114800 3035400 0 0 3429100 0 3766200 2754000 5309300 55572 3226 49936 466984;466985;466986;466987;466988;466989;466990;466991;466992;466993 369828;369829;369830;369831;369832;369833 369829 6 VEVTEFEDIK Unmodified 1207.5972 0.59723423 2049;906 P0DME0;Q01105 SETSIP;SET Protein SETSIP;Protein SET no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 68.068 67.519 2 0.00011207 77609 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 143.03 101.05 4756400000 18328000 0 0 219700000 227820000 205220000 245510000 234850000 155910000 295640000 694380000 657550000 361900000 467690000 971860000 55573 906;2049 49937 466994;466995;466996;466997;466998;466999;467000;467001;467002;467003;467004;467005;467006 369834;369835;369836;369837;369838;369839;369840;369841;369842;369843;369844;369845;369846;369847;369848;369849;369850;369851;369852;369853 369834 20 VEVVEERQAIPLDENEGIYVQDVK Unmodified 2770.4025 0.40250417 2444 Q14764 MVP Major vault protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 81.89 77.224 3 1.3906E-07 93224 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 70.994 63.882 52332000 17204000 31735000 3392000 0 0 0 0 0 0 0 0 0 0 0 0 55574 2444 49938 467007;467008;467009;467010 369854;369855;369856;369857 369855 4 VEVVEPK Unmodified 798.44872 0.4487195 36 A8K2U0 A2ML1 Alpha-2-macroglobulin-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 24.243 24.518 2 0.028921 26595 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 76.134 22.971 60434000 0 0 0 31496000 0 0 0 5472400 0 6457700 6082500 5541600 5384700 0 0 55575 36 49939 467011;467012;467013;467014;467015;467016 369858 369858 1 VEVVSPATPVPSETAPASVFPQNGAAR Unmodified 2677.3711 0.37114446 3697 Q92993 KAT5 Histone acetyltransferase KAT5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 2 1 80.54 80.607 3 1.7354E-07 92876 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 40.404 33.558 17961000 0 0 0 0 2195100 4128500 1816100 2164700 2954500 0 0 0 2104000 2597600 0 55576 3697 49940 467017;467018;467019;467020;467021;467022;467023;467024 369859;369860;369861;369862;369863;369864;369865;369866 369861 8 VEVYADADEILQEEIK Unmodified 1862.9149 0.91493955 463 O75150 RNF40 E3 ubiquitin-protein ligase BRE1B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 90.613 84.713 2;3 0.00036036 107724 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.38 86.775 70266000 38329000 29072000 2864700 0 0 0 0 0 0 0 0 0 0 0 0 55577 463 49941 467025;467026;467027;467028 369867;369868;369869;369870 369868 4 VEVYLTELK Unmodified 1092.6067 0.6066767 5198 Q9Y4E8 USP15 Ubiquitin carboxyl-terminal hydrolase 15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72.811 71.946 2 0.00061025 90398 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.52 44.776 183490000 7458100 102300000 0 2881300 4170500 4944800 4288800 4593200 3816500 6189700 6975900 9500800 6041700 7009200 13314000 55578 5198 49942 467029;467030;467031;467032;467033;467034;467035;467036;467037;467038;467039;467040;467041;467042 369871;369872;369873;369874;369875;369876;369877;369878;369879;369880;369881;369882;369883;369884;369885;369886;369887 369874 17 VEVYPVELLLVR Unmodified 1427.8388 0.8388019 1670 P51784 USP11 Ubiquitin carboxyl-terminal hydrolase 11 yes yes 0 0 0 By MS/MS 10 0 1 1 96.573 96.728 2 0.012301 112269 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.683 26.568 1879600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1879600 55579 1670 49943 467043 369888 369888 1 VEVYQQQIEMEK Oxidation (M) 1538.7287 0.72865911 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 1 0 By MS/MS 2 0 1 1 47.424 41.861 2 4.7138E-13 54628 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.41 104.29 15672000 0 15672000 0 0 0 0 0 0 0 0 0 0 0 0 0 55580 5049 49944 467044 369889;369890 369890 6399 2 VEVYQQQIEMEK Unmodified 1522.7337 0.73374448 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS 2 0 1 1 58.87 53.028 2 5.136E-10 68226 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145.89 108.77 45010000 0 45010000 0 0 0 0 0 0 0 0 0 0 0 0 0 55581 5049 49944 467045 369891 369891 1 VEYADCVDK Unmodified 1097.4699 0.46992522 2756 Q5SRE5 NUP188 Nucleoporin NUP188 homolog yes yes 0 0 0 By MS/MS 10 0 1 1 27.241 27.563 2 0.05036 28524 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 58.23 29.081 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55582 2756 49945 467046 369892 369892 1 VEYAYSDNSLDPGLFVESTRK Unmodified 2389.1438 0.14377029 4891 Q9UH92 MLX Max-like protein X yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 80.64 80.734 3 8.0302E-08 93407 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 66.874 58.514 26923000 0 0 0 0 0 4935100 0 0 4499400 8434400 0 0 2726000 6328500 0 55583 4891 49946 467047;467048;467049;467050;467051 369893;369894;369895;369896 369894 4 VEYHAGGSTQNSIK Unmodified 1489.7161 0.71612059 1765 P55263 ADK Adenosine kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 6.76 3.87 6 1 10 2 3 2 1 1 1 1 1 1 1 1 1 1 20.948 19.451 2;3 3.2418E-45 25449 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 173.44 157.3 1475300000 114270000 1081600000 191570000 2404300 1413700 3132200 0 2528900 0 5729400 14970000 11873000 2744800 12777000 30329000 55584 1765 49947 467052;467053;467054;467055;467056;467057;467058;467059;467060;467061;467062;467063;467064;467065;467066;467067;467068 369897;369898;369899;369900;369901;369902;369903;369904;369905;369906;369907 369897 11 VEYHFLSPYVSPK Unmodified 1564.7926 0.79257999 762 P02786 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 73.776 73.898 3 0.00035983 85140 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 61.167 53.937 91353000 0 0 0 0 2859200 12505000 3968100 8504600 8538200 6622300 6873500 11440000 5136100 7230500 17675000 55585 762 49948 467069;467070;467071;467072;467073;467074;467075;467076;467077;467078;467079 369908;369909;369910;369911;369912 369908 5 VEYQENGPLFSELK Unmodified 1651.8094 0.80935227 3202 Q86Y07 VRK2 Serine/threonine-protein kinase VRK2 yes yes 0 0 0 By MS/MS 2 0 2 2 82.676 77.971 2 0.0018822 96975 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.477 79.279 23583000 0 23583000 0 0 0 0 0 0 0 0 0 0 0 0 0 55586 3202 49949 467080;467081 369913;369914 369914 1 VEYSEEELK Unmodified 1124.5237 0.52373493 973 P12956 XRCC6 X-ray repair cross-complementing protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 35.698 34.606 2 0.0025264 37461 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 138.54 121.6 3046200000 97271000 1138400000 4892800 106200000 64986000 142520000 136550000 95264000 101940000 125500000 190920000 213490000 141130000 177580000 309550000 55587 973 49950 467082;467083;467084;467085;467086;467087;467088;467089;467090;467091;467092;467093;467094;467095;467096;467097 369915;369916;369917;369918;369919;369920;369921;369922;369923;369924;369925;369926;369927;369928;369929;369930;369931 369921 10 VEYTLGEESEAPGQR Unmodified 1663.7689 0.76894402 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.69 2.88 3 2 24 1 4 2 2 2 2 2 2 2 2 2 2 2 2 49.128 48.502 2;3 9.4579E-98 54730 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 237.37 227.72 5214000000 0 122050000 0 284670000 269090000 388600000 256470000 312040000 384550000 383270000 468590000 902160000 417810000 416940000 607820000 55588 2102 49951 467098;467099;467100;467101;467102;467103;467104;467105;467106;467107;467108;467109;467110;467111;467112;467113;467114;467115;467116;467117;467118;467119;467120;467121;467122;467123;467124;467125;467126 369932;369933;369934;369935;369936;369937;369938;369939;369940;369941;369942;369943;369944;369945;369946;369947;369948;369949;369950;369951;369952;369953;369954;369955;369956;369957 369944 16 VEYTLGEESEAPGQRALPSEELNRQLEK Unmodified 3171.5684 0.5684003 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS 2 0 5 1 2 2 76.41 71.71 3;4 1.0357E-21 91527 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.881 81.053 282690000 103490000 74652000 104550000 0 0 0 0 0 0 0 0 0 0 0 0 55589 2102 49952 467127;467128;467129;467130;467131 369958;369959;369960;369961 369959 4 VFAAEALLK Unmodified 960.56442 0.56441796 4507 Q9HC52 CBX8 Chromobox protein homolog 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.993 76.055 2 0.0051115 87609 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 83.265 63.905 128680000 0 0 0 6406600 7522000 10549000 9402800 8583400 7798100 14539000 12488000 15339000 7914400 10362000 17771000 55590 4507 49953 467132;467133;467134;467135;467136;467137;467138;467139;467140;467141;467142;467143 369962;369963;369964;369965;369966;369967;369968;369969;369970;369971;369972;369973 369964 12 VFAAGEETAHMSLVDK Unmodified 1703.8189 0.8188711 1349 P35251 RFC1 Replication factor C subunit 1 yes yes 0 0 0 By MS/MS 2 0 1 1 65.973 62.22 3 0.022925 77137 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 30.739 18.823 4607200 0 0 4607200 0 0 0 0 0 0 0 0 0 0 0 0 55591 1349 49954 467144 369974 369974 1 VFADYEAYVK Unmodified 1203.5812 0.58119023 828 P06737 PYGL Glycogen phosphorylase, liver form yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 74.028 70.015 2 0.031373 87913 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.433 29.272 145450000 0 141000000 4449500 0 0 0 0 0 0 0 0 0 0 0 0 55592 828 49955 467145;467146 369975 369975 1 VFAIQDPTLPLTSYK Unmodified 1691.9134 0.91342341 4024 Q99570 PIK3R4 Phosphoinositide 3-kinase regulatory subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.24 2 1 10 2 1 1 1 1 1 1 1 1 1 1 1 87.874 87.066 2 1.5277E-31 108242 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 133.05 118.59 155760000 0 116450000 1807400 0 2145900 4014900 0 2979300 3384200 5978100 3497700 0 2566400 3619800 9318400 55593 4024 49956 467147;467148;467149;467150;467151;467152;467153;467154;467155;467156;467157;467158;467159 369976;369977;369978;369979;369980;369981;369982;369983;369984;369985;369986;369987;369988;369989;369990 369979 15 VFANAPDSACVIGLK Unmodified 1560.797 0.79701344 1063 P17858 PFKL ATP-dependent 6-phosphofructokinase, liver type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.977 75.036 2 3.9552E-14 86481 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 98.898 81.034 293690000 0 0 0 12856000 21057000 17271000 15572000 20110000 14570000 23175000 28591000 42915000 26546000 31221000 39810000 55594 1063 49957 467160;467161;467162;467163;467164;467165;467166;467167;467168;467169;467170;467171 369991;369992;369993;369994;369995;369996;369997;369998;369999;370000;370001;370002 369992 11 VFANNADQQLVK Unmodified 1345.699 0.69901396 2743 Q5JVF3 PCID2 PCI domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.4 46.567 2 3.232E-06 52337 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 138.08 123.94 207770000 0 0 0 8402500 8187200 14720000 9341000 16777000 5658800 21772000 24912000 26676000 14349000 17690000 39286000 55595 2743 49958 467172;467173;467174;467175;467176;467177;467178;467179;467180;467181;467182;467183 370003;370004;370005;370006;370007;370008;370009;370010;370011;370012;370013;370014 370011 12 VFANPEDCVAFGK Unmodified 1452.6708 0.6707503 926 P10620 MGST1 Microsomal glutathione S-transferase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68.532 67.95 2 9.6178E-06 85378 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.96 98.744 564410000 0 306320000 4066800 9057500 17553000 17700000 14951000 21035000 12007000 20894000 24222000 29349000 23637000 25333000 38276000 55596 926 49959 467184;467185;467186;467187;467188;467189;467190;467191;467192;467193;467194;467195;467196;467197 370015;370016;370017;370018;370019;370020;370021;370022;370023;370024 370016 6 VFASELNAGIIK Unmodified 1260.7078 0.70778773 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 75.743 75.803 2 3.6934E-07 86949 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 144.77 124.98 224010000 0 0 0 10324000 15050000 26112000 9937500 15675000 9787100 19993000 19221000 27944000 0 21674000 48298000 55597 4819 49960 467198;467199;467200;467201;467202;467203;467204;467205;467206;467207;467208 370025;370026;370027;370028 370027 2 VFASLPQVER Unmodified 1144.6241 0.6240581 453 O75083 WDR1 WD repeat-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 74.217 66.087 2 0.036645 87333 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.305 32.306 20131000 20131000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55598 453 49961 467209 370029 370029 1 VFASLPQVERGVSK Unmodified 1515.8409 0.84092717 453 O75083 WDR1 WD repeat-containing protein 1 yes yes 0 0 1 By MS/MS 2 0 2 2 73.213 65.017 2;3 3.0327E-06 86275 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 117.98 79.889 170930000 170930000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55599 453 49962 467210;467211 370030;370031 370031 1 VFAVLNEK Unmodified 918.51747 0.51746776 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 54.947 54.109 2 0.0076113 60399 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 89.046 53.797 678790000 30376000 0 6916100 38664000 0 49716000 62668000 0 50607000 67247000 64138000 86844000 82080000 56662000 82867000 55600 2556 49963 467212;467213;467214;467215;467216;467217;467218;467219;467220;467221;467222;467223 370032;370033;370034;370035;370036;370037;370038;370039;370040;370041;370042;370043 370042 8 VFDAIMNFK Oxidation (M) 1099.5372 0.53721693 980 P13639 EEF2 Elongation factor 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.45 3.89 8 2 12 5 3 2 1 1 1 1 1 1 1 1 1 1 1 1 71.635 69.682 2 0.00046486 69966 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 123.69 111.33 3848200000 1370200000 1507400000 620760000 14580000 11600000 20996000 12822000 14424000 12289000 18134000 47220000 33122000 15589000 35951000 113050000 55601 980 49964 467224;467225;467226;467227;467228;467229;467230;467231;467232;467233;467234;467235;467236;467237;467238;467239;467240;467241;467242;467243;467244;467245 370044;370045;370046;370047;370048;370049;370050;370051;370052;370053;370054;370055;370056;370057;370058;370059;370060;370061;370062;370063;370064;370065;370066 370048 1319 23 VFDAIMNFK Unmodified 1083.5423 0.54230231 980 P13639 EEF2 Elongation factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.29 3.67 4 2 11 3 2 1 1 1 1 1 1 1 1 1 1 1 1 81.952 80.675 2 0.00029226 102891 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 150.84 150.84 2957700000 1796900000 595900000 252900000 4548300 2997400 9237900 0 6763200 7207200 10063000 27469000 22686000 8543300 35443000 176980000 55602 980 49964 467246;467247;467248;467249;467250;467251;467252;467253;467254;467255;467256;467257;467258;467259;467260;467261;467262 370067;370068;370069;370070;370071;370072;370073;370074;370075;370076;370077 370073 11 VFDAIMNFKK Oxidation (M) 1227.6322 0.63217995 980 P13639 EEF2 Elongation factor 2 yes yes 0 1 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 58.191 57.303 3 0.0023298 63720 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.55 45.956 100530000 37022000 0 0 7599500 0 0 4458200 0 0 4541400 0 11652000 6832500 7707200 20717000 55603 980 49965 467263;467264;467265;467266;467267;467268;467269;467270 370078;370079;370080 370078 1319 2 VFDAIMNFKK Unmodified 1211.6373 0.63726532 980 P13639 EEF2 Elongation factor 2 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 71.631 71.744 3 0.011454 82320 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 32.218 26.185 53374000 0 0 0 2461900 0 1254800 1909300 4044500 0 2251700 3644900 7378500 1476100 4512300 24440000 55604 980 49965 467271;467272;467273;467274;467275;467276;467277;467278;467279;467280 370081;370082;370083 370083 3 VFDDESDEKEDEEYADEK Unmodified 2190.8601 0.86006303 360 O43719 HTATSF1 HIV Tat-specific factor 1 yes yes 0 0 1 By MS/MS 2 0 1 1 42.683 35.948 3 0.014421 49420 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 34.094 33.307 8981200 8981200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55605 360 49966 467281 370084 370084 1 VFDEFKPLVEEPQNLIK Unmodified 2044.0881 0.088093311 64 CON__P02768-1;P02768 ALB Serum albumin yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 87.183 87.265 3 9.3007E-29 101043 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 115.8 112.08 + 37979000 0 0 0 7471400 0 0 0 18947000 2054200 2824800 1529400 0 0 0 5151700 55606 64 49967 467282;467283;467284;467285;467286;467287 370085;370086;370087;370088;370089;370090;370091 370090 7 VFDESLNFRK Unmodified 1253.6404 0.64043645 2759 Q5SW79 CEP170 Centrosomal protein of 170 kDa yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 55.116 54.998 3 0.0044381 62074 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 39.937 29.031 47066000 0 0 0 7527500 6485900 9106700 9079300 7537600 0 7329400 0 0 0 0 0 55607 2759 49968 467288;467289;467290;467291;467292;467293 370092;370093;370094 370092 3 VFDFAGEEVR Unmodified 1167.556 0.55603812 4871 Q9UEE9 CFDP1 Craniofacial development protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 68.652 68.797 2 0.002198 78885 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 85.676 58.422 131030000 0 0 0 0 10269000 6222600 9876200 6878800 8064400 9856900 20437000 12769000 11802000 10728000 24126000 55608 4871 49969 467294;467295;467296;467297;467298;467299;467300;467301;467302;467303;467304 370095;370096;370097;370098;370099;370100;370101;370102;370103;370104;370105;370106;370107 370096 13 VFDFAGEEVRVTK Unmodified 1495.7671 0.76709352 4871 Q9UEE9 CFDP1 Craniofacial development protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 2 2 2 2 75.857 70.704 3 0.016916 91165 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 44.968 38.338 58820000 48353000 10468000 0 0 0 0 0 0 0 0 0 0 0 0 0 55609 4871 49970 467305;467306;467307;467308 370108;370109 370109 2 VFDFLVDSINK Unmodified 1295.6762 0.67615325 2215 Q12965 MYO1E Unconventional myosin-Ie yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 88.3 88.37 2 0.0010106 102521 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 86.624 62.594 52267000 0 0 0 1385600 1967000 4985500 2018200 3472800 2944100 4853600 4167300 6828200 2805500 4145100 12694000 55610 2215 49971 467309;467310;467311;467312;467313;467314;467315;467316;467317;467318;467319;467320 370110;370111;370112;370113;370114;370115;370116;370117;370118;370119;370120;370121;370122;370123 370111 13 VFDFTFSPEEMK Oxidation (M) 1491.6592 0.65918256 999 P14550 AKR1A1 Alcohol dehydrogenase [NADP(+)] yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.9 3.81 3 1 6 1 2 1 1 1 1 1 1 1 83.55 81.79 2 8.2218E-13 102064 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.03 120.11 627400000 38536000 517340000 28037000 0 0 0 1772300 1359100 0 0 7536500 7087400 0 4143100 21585000 55611 999 49972 467321;467322;467323;467324;467325;467326;467327;467328;467329;467330 370124;370125;370126;370127;370128;370129;370130;370131 370124 1353 8 VFDFTFSPEEMK Unmodified 1475.6643 0.66426794 999 P14550 AKR1A1 Alcohol dehydrogenase [NADP(+)] yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.83 3.67 3 1 2 1 2 1 1 1 89.916 86.838 2 3.1001E-14 108617 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 163.38 157.35 476840000 23218000 433190000 9601700 0 0 0 0 0 0 0 0 0 1079900 0 9742900 55612 999 49972 467331;467332;467333;467334;467335;467336 370132;370133;370134;370135;370136 370132 5 VFDGIPPPYDK Unmodified 1246.6234 0.6233894 1415 P40429;Q6NVV1 RPL13A;RPL13AP3 60S ribosomal protein L13a;Putative 60S ribosomal protein L13a protein RPL13AP3 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.08 2.5 2 1 22 1 2 2 2 2 2 3 2 2 2 1 2 2 67.768 67.033 2 0.0014833 77294 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 72.434 62.203 827770000 10413000 334400000 0 24830000 22990000 43629000 27029000 15298000 20701000 0 61149000 65941000 25280000 54441000 121670000 55613 1415 49973 467337;467338;467339;467340;467341;467342;467343;467344;467345;467346;467347;467348;467349;467350;467351;467352;467353;467354;467355;467356;467357;467358;467359;467360;467361 370137;370138;370139;370140;370141;370142;370143;370144;370145;370146;370147;370148;370149;370150;370151;370152;370153;370154;370155;370156;370157;370158;370159;370160;370161;370162;370163 370155 27 VFDLQFSTDSPR Unmodified 1410.6779 0.67794416 2467 Q15003 NCAPH Condensin complex subunit 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 2 1 75.749 75.828 2 0.00030602 89599 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.417 56.858 32521000 0 0 0 0 2026900 3994700 0 0 0 5069200 0 5405400 3486600 5918100 6619600 55614 2467 49974 467362;467363;467364;467365;467366;467367;467368;467369;467370 370164;370165;370166;370167;370168;370169;370170;370171 370166 7 VFDPQNDK Unmodified 961.45051 0.45051041 258 O15145 ARPC3 Actin-related protein 2/3 complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 21.562 20.802 2 0.0012541 25885 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 166.17 150.73 1091100000 68234000 845710000 0 15827000 5938800 15584000 7754900 0 8063300 8933300 23106000 19321000 11651000 19829000 41132000 55615 258 49975 467371;467372;467373;467374;467375;467376;467377;467378;467379;467380;467381;467382;467383;467384 370172;370173;370174;370175;370176;370177;370178;370179;370180 370174 8 VFDPQNDKPSK Unmodified 1273.6303 0.63026569 258 O15145 ARPC3 Actin-related protein 2/3 complex subunit 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 5.57 3.85 3 1 3 1 2 1 1 1 1 23.965 21.579 3 0.012113 30705 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.776 35.346 260450000 14525000 198240000 9513000 19909000 0 7297000 0 10967000 0 0 0 0 0 0 0 55616 258 49976 467385;467386;467387;467388;467389;467390;467391 370181;370182;370183;370184;370185 370183 3 VFDPVPVGVTK Unmodified 1156.6492 0.64921022 2152 Q08211 DHX9 ATP-dependent RNA helicase A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 72.371 71.209 2 0.0009458 81101 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.143 68.663 1616600000 22190000 975030000 22088000 49411000 44686000 56104000 38505000 32780000 28292000 67231000 43900000 62400000 56651000 46976000 70323000 55617 2152 49977 467392;467393;467394;467395;467396;467397;467398;467399;467400;467401;467402;467403;467404;467405;467406;467407 370186;370187;370188;370189;370190;370191;370192;370193;370194;370195;370196;370197;370198;370199;370200 370190 13 VFDQQSSPMVTR Oxidation (M) 1409.6609 0.66091389 276 O15357 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 13 1 2 1 1 1 1 2 1 1 2 35.084 35.253 2 1.2357E-05 37521 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 105.2 96.012 71792000 0 0 0 5746200 7389900 0 5647200 3278500 0 6894300 0 16989000 11772000 4533300 9542300 55618 276 49978 467408;467409;467410;467411;467412;467413;467414;467415;467416;467417;467418;467419;467420 370201;370202;370203;370204;370205;370206;370207;370208;370209 370205 364 9 VFDQQSSPMVTR Unmodified 1393.666 0.66599927 276 O15357 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 45.286 45.176 2 7.6278E-09 50711 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 123.51 108.84 22646000 0 0 0 4857800 0 0 7901800 9886400 0 0 0 0 0 0 0 55619 276 49978 467421;467422;467423;467424;467425;467426;467427;467428 370210;370211;370212;370213;370214;370215;370216;370217 370210 8 VFDQYQR Unmodified 954.45593 0.45593014 572 O76027 ANXA9 Annexin A9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 28.782 29.131 2 0.024035 31476 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 83.614 48.807 43665000 0 0 0 0 0 0 9089500 0 0 0 0 12035000 13996000 8543300 0 55620 572 49979 467429;467430;467431;467432 370218;370219 370218 2 VFDVIIR Unmodified 860.51199 0.51198846 961 P12081 HARS Histidine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 72.556 72.638 2 0.050333 82746 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.714 37.716 24563000 0 0 0 3922200 0 0 0 3032600 0 0 5250500 0 0 4783800 7574100 55621 961 49980 467433;467434;467435;467436;467437 370220 370220 1 VFDYEGLGNLLK Unmodified 1366.7133 0.71326704 4433 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 93.887 89.84 2 0.00014489 111515 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.3 102.3 35356000 0 35356000 0 0 0 0 0 0 0 0 0 0 0 0 0 55622 4433 49981 467438;467439 370221 370221 1 VFDYFEGATSQR Unmodified 1418.6466 0.64664404 5050 Q9UPN6 SCAF8 Protein SCAF8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 1 1 2 68.887 68.977 2 2.8637E-05 79093 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 97.456 89.811 97079000 0 0 0 4994700 5914000 0 7318000 5654500 8262400 7580300 10104000 13123000 7487800 10850000 15790000 55623 5050 49982 467440;467441;467442;467443;467444;467445;467446;467447;467448;467449;467450;467451;467452 370222;370223;370224;370225;370226;370227;370228;370229;370230;370231;370232;370233;370234;370235 370229 14 VFDYFEGATSQRK Unmodified 1546.7416 0.74160705 5050 Q9UPN6 SCAF8 Protein SCAF8 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 1 1 2 2 2 2 2 1 2 2 2 58.665 58.833 2;3 0.00029554 66063 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.121 63.254 248440000 0 0 0 9998500 10475000 11052000 21013000 20191000 19324000 18936000 24880000 26851000 26188000 21690000 37844000 55624 5050 49983 467453;467454;467455;467456;467457;467458;467459;467460;467461;467462;467463;467464;467465;467466;467467;467468;467469;467470;467471;467472 370236;370237;370238;370239;370240;370241;370242;370243;370244;370245;370246;370247;370248;370249;370250;370251;370252 370240 16 VFEECSPK Unmodified 994.44298 0.44298219 2918 Q6P1L5 FAM117B Protein FAM117B yes yes 0 0 0 By MS/MS 2 0 1 1 24.396 20.268 2 0.01816 26880 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.142 73.51 10378000 0 10378000 0 0 0 0 0 0 0 0 0 0 0 0 0 55625 2918 49984 467473 370253 370253 1 VFEEDALSWEDK Unmodified 1466.6565 0.65654002 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 75.064 73.913 2 8.1303E-07 91627 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 150.06 121.01 782060000 39092000 545540000 10221000 7577900 9531200 15228000 8046300 17201000 16075000 19801000 13576000 17379000 14750000 14723000 33320000 55626 2392 49985 467474;467475;467476;467477;467478;467479;467480;467481;467482;467483;467484;467485;467486;467487;467488;467489 370254;370255;370256;370257;370258;370259;370260;370261;370262;370263;370264;370265;370266;370267;370268;370269;370270 370258 17 VFEELQATDK Unmodified 1178.5819 0.58191851 1797 P57740 NUP107 Nuclear pore complex protein Nup107 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.23 3.24 2 1 10 2 1 1 1 1 1 1 1 1 1 1 1 47.317 46.19 2 0.0049244 56464 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 87.308 65.222 264260000 0 114820000 3207700 8849000 9985200 0 12476000 0 12751000 18797000 19058000 0 17040000 20248000 27026000 55627 1797 49986 467490;467491;467492;467493;467494;467495;467496;467497;467498;467499;467500;467501;467502 370271;370272;370273;370274;370275;370276;370277;370278;370279;370280;370281;370282;370283 370278 13 VFEEMASR Oxidation (M) 983.43823 0.43823117 3171 Q86VQ1 GLCCI1 Glucocorticoid-induced transcript 1 protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.069 18.257 2 0.018262 18513 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 57.177 44.793 42213000 0 0 0 3533400 2893100 3316400 3442300 2738800 2552000 5091800 3932300 4880100 3609100 2812200 3411000 55628 3171 49987 467503;467504;467505;467506;467507;467508;467509;467510;467511;467512;467513;467514 370284;370285;370286;370287;370288;370289 370285 4793 6 VFEGNRPTNSIVFTK Unmodified 1707.8944 0.8944193 829;93 P06744;CON__Q3ZBD7 GPI Glucose-6-phosphate isomerase no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.89 3.41 3 2 13 3 2 1 1 1 1 1 1 2 1 2 2 59.695 58.021 2;3 2.0726E-21 64633 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 119.76 80.498 + 1767100000 759100000 72873000 0 8172900 9243700 11683000 8244100 8116600 0 2982200 147310000 17035000 0 113910000 608440000 55629 829;93 49988 467515;467516;467517;467518;467519;467520;467521;467522;467523;467524;467525;467526;467527;467528;467529;467530;467531;467532 370290;370291;370292;370293;370294;370295;370296;370297;370298;370299;370300;370301;370302;370303;370304;370305;370306;370307 370305 17 VFEGQTNIETSGLPK Unmodified 1618.8203 0.82025131 2730 Q5HYK7 SH3D19 SH3 domain-containing protein 19 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 63.408 63.069 2 4.2903E-19 72154 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 109.6 81.586 122920000 0 34619000 0 0 5552200 6595900 7059900 6556800 4141100 9086400 9552500 11667000 6365400 8005100 13723000 55630 2730 49989 467533;467534;467535;467536;467537;467538;467539;467540;467541;467542;467543;467544 370308;370309;370310;370311;370312;370313;370314;370315;370316 370312 9 VFEHDSVELNCK Unmodified 1475.6715 0.67147858 929 P10768 ESD S-formylglutathione hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 1 3 2 46.373 41.163 2;3 2.6634E-54 54149 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 212.28 194.84 578800000 33350000 342930000 202510000 0 0 0 0 0 0 0 0 0 0 0 0 55631 929 49990 467545;467546;467547;467548;467549;467550 370317;370318;370319;370320;370321;370322;370323;370324 370318 8 VFEHFLENLDK Unmodified 1389.6929 0.69286595 1582 P49642 PRIM1 DNA primase small subunit yes yes 0 0 0 By MS/MS 2 0 1 1 84.938 80.194 3 0.039006 99810 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 36.32 24.738 19350000 0 19350000 0 0 0 0 0 0 0 0 0 0 0 0 0 55632 1582 49991 467551 370325 370325 1 VFEIRNTEDLTEEWLREK Unmodified 2306.1543 0.1542754 1823 P60983 GMFB Glia maturation factor beta yes yes 0 0 2 By MS/MS 2 0 2 2 90.732 82.601 3;4 1.5161E-35 107266 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 130.11 118.09 111490000 111490000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55633 1823 49992 467552;467553 370326;370327 370327 2 VFELMTSLHTK Unmodified 1304.6799 0.67985842 2127 Q06323 PSME1 Proteasome activator complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.33 2.98 5 1 3 1 1 1 79.146 73.914 2;3 0.00041835 93755 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.266 80.537 293360000 202120000 64353000 4208300 0 0 0 0 0 0 0 0 0 0 0 22676000 55634 2127 49993 467554;467555;467556;467557;467558;467559 370328;370329;370330;370331;370332;370333 370328 5 VFELMTSLHTK Oxidation (M) 1320.6748 0.67477304 2127 Q06323 PSME1 Proteasome activator complex subunit 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 6 3 1 2 66.738 60.352 2;3 0.00030462 80768 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.05 82.672 231980000 198230000 21757000 11992000 0 0 0 0 0 0 0 0 0 0 0 0 55635 2127 49993 467560;467561;467562;467563;467564;467565 370334;370335;370336;370337;370338 370335 3432 3 VFELNSDSGK Unmodified 1094.5244 0.52440364 4691 Q9NW68 BSDC1 BSD domain-containing protein 1 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 39.126 39.526 2 0.0041248 42774 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.985 56.599 9849500 0 0 0 0 0 0 3158300 0 0 0 0 0 0 0 6691200 55636 4691 49994 467566;467567 370339 370339 1 VFEMIESQDPTMIGVAVDTVGILGSNVEGK Oxidation (M) 3150.5465 0.54646757 2602 Q16401 PSMD5 26S proteasome non-ATPase regulatory subunit 5 yes yes 0 1 0 By MS/MS 2 0 2 2 99.174 91.043 3 6.2035E-67 118539 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 114.79 109.31 23318000 23318000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55637 2602 49995 467568;467569 370340;370341 370341 4240;4241 2 VFEMIESQDPTMIGVAVDTVGILGSNVEGK Unmodified 3134.5516 0.55155295 2602 Q16401 PSMD5 26S proteasome non-ATPase regulatory subunit 5 yes yes 0 0 0 By MS/MS 2 0 1 1 101.2 93.066 3 1.0319E-117 119813 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 140.46 134.43 34579000 34579000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55638 2602 49995 467570 370342 370342 1 VFEMSQDK Oxidation (M) 998.4379 0.43789681 2415 Q14566 MCM6 DNA replication licensing factor MCM6 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.12 3 13 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 12.542 12.048 2 0.009543 13930 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.81 59.235 419850000 12618000 358950000 3875000 1914900 1525900 6429300 2841000 2173800 1734800 3386300 4809300 6146900 2788300 2683700 7974700 55639 2415 49996 467571;467572;467573;467574;467575;467576;467577;467578;467579;467580;467581;467582;467583;467584;467585;467586 370343;370344;370345;370346 370345 3970 4 VFEMSQDK Unmodified 982.44298 0.44298219 2415 Q14566 MCM6 DNA replication licensing factor MCM6 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30.004 29.216 2 0.012115 37767 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.41 55.041 1150500000 19160000 370350000 4674400 79705000 37556000 31828000 28818000 159760000 38148000 64074000 53129000 82339000 79862000 40186000 60881000 55640 2415 49996 467587;467588;467589;467590;467591;467592;467593;467594;467595;467596;467597;467598;467599;467600;467601 370347;370348;370349 370347 2 VFENQEVQAIGGK Unmodified 1417.7201 0.72014333 564 O75943 RAD17 Cell cycle checkpoint protein RAD17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 51.526 51.425 2 0.00052153 58649 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 78.655 56.014 17797000 0 0 0 0 4533500 0 5985700 7277700 0 0 0 0 0 0 0 55641 564 49997 467602;467603;467604;467605;467606 370350;370351;370352;370353 370353 4 VFEPNEEALGVVLHK Unmodified 1679.8883 0.88827129 346 O43615 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.7 3.52 2 1 7 1 1 1 1 1 1 1 1 1 1 80.195 79.735 3 1.2113E-14 91745 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 83.729 77.292 495580000 373540 1912600 14894000 0 0 0 43154000 89033000 55931000 0 0 38627000 62153000 57985000 131520000 55642 346 49998 467607;467608;467609;467610;467611;467612;467613;467614;467615;467616 370354;370355;370356;370357;370358;370359;370360;370361;370362 370356 8 VFETLEAR Unmodified 963.50255 0.50254598 1096 P19838 NFKB1 Nuclear factor NF-kappa-B p105 subunit;Nuclear factor NF-kappa-B p50 subunit yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 44.588 45.335 2 0.035595 49754 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.403 19.932 19380000 0 0 0 0 0 0 0 0 0 0 0 7854600 0 0 11525000 55643 1096 49999 467617;467618 370363 370363 1 VFEVMLATDR Oxidation (M) 1195.5907 0.59070906 1133 P22061 PCMT1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase yes yes 0 1 0 By matching By matching By MS/MS By matching By matching 10 0 5 1 1 1 1 1 66.633 66.821 2 0.030067 76533 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 65.305 47.486 23501000 0 0 0 0 2068600 0 0 0 3427400 0 4581400 6178200 0 0 7245200 55644 1133 50000 467619;467620;467621;467622;467623 370364 370364 0 VFEVNASNLEK Unmodified 1248.635 0.63501672 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 58.692 58.861 2 0.00018476 66844 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 123.63 82.638 275080000 0 0 0 16312000 0 30725000 19189000 0 16961000 27844000 31004000 29829000 22378000 26460000 54377000 55645 4819 50001 467624;467625;467626;467627;467628;467629;467630;467631;467632;467633 370365;370366;370367;370368;370369;370370;370371;370372;370373;370374;370375 370371 10 VFEYELGEDLGTK Unmodified 1498.7191 0.71914028 5370 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 1 2 1 2 1 2 1 1 2 1 1 74.45 74.521 2 0.033513 85755 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 33.886 8.6476 + 1874100000 0 0 0 86367000 103470000 254360000 87922000 160360000 138170000 363300000 118880000 166370000 203070000 80981000 110890000 55646 5370 50002 467634;467635;467636;467637;467638;467639;467640;467641;467642;467643;467644;467645;467646;467647;467648;467649 370376;370377;370378;370379 370376 4 VFEYQCGELLDPR Unmodified 1624.7555 0.75554256 5370 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 19 2 3 1 3 1 1 1 3 2 1 1 86.415 86.442 2 0.017291 96562 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 39.022 27.809 + 108710000 0 0 0 12836000 16461000 8149300 10171000 4479700 7299500 0 6325800 24158000 12541000 4408400 1881500 55647 5370 50003 467650;467651;467652;467653;467654;467655;467656;467657;467658;467659;467660;467661;467662;467663;467664;467665;467666;467667;467668 370380;370381;370382 370382 3 VFFIQACQGDNYQK Unmodified 1716.793 0.7929907 2447 Q14790 CASP8 Caspase-8;Caspase-8 subunit p18;Caspase-8 subunit p10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 2 1 1 1 1 75.943 71.099 2 1.7815E-09 91859 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 140.49 127.87 35437000 31320000 2522400 1595300 0 0 0 0 0 0 0 0 0 0 0 0 55648 2447 50004 467669;467670;467671 370383;370384;370385 370384 3 VFFMAVDGVAPR Oxidation (M) 1323.6645 0.66454271 3295 Q8IZH2 XRN1 5'-3' exoribonuclease 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.036 76.056 2 0.00031557 87881 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 70.028 54.399 36608000 0 0 0 1875800 2221300 3151700 3786700 3443800 4172700 5308200 5046400 0 3913300 3688400 0 55649 3295 50005 467672;467673;467674;467675;467676;467677;467678;467679;467680;467681;467682 370386;370387;370388;370389;370390;370391;370392;370393;370394;370395;370396 370396 4893 11 VFFTCNACGESVK Unmodified 1517.6643 0.66428471 4718 Q9NX58 LYAR Cell growth-regulating nucleolar protein yes yes 0 0 0 By MS/MS 2 0 1 1 62.687 56.794 2 0.015241 72935 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.781 63.828 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55650 4718 50006 467683 370397 370397 1 VFFVESVCDDPDVIAANILEVK Unmodified 2478.2352 0.23522783 433 O60825 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase yes yes 0 0 0 By MS/MS 2 0 1 1 99.862 91.732 3 1.0365E-12 118230 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 91.276 88.223 25476000 25476000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55651 433 50007 467684 370398 370398 1 VFFYNPTTR Unmodified 1143.5713 0.57129425 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.845 67.926 2 0.0037768 77878 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 107.66 98.077 2469500000 0 0 0 127310000 171170000 180820000 152440000 182950000 141240000 228780000 254390000 387730000 210320000 194130000 238260000 55652 213 50008 467685;467686;467687;467688;467689;467690;467691;467692;467693;467694;467695;467696 370399;370400;370401;370402;370403;370404;370405;370406;370407;370408;370409;370410;370411;370412;370413;370414 370400 16 VFGAAPLENVVR Unmodified 1270.7034 0.70337105 2625 Q16656 NRF1 Nuclear respiratory factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 76.902 76.91 2 0.015799 88858 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 45.368 29.726 18819000 0 0 0 1808100 1280600 0 2219600 1982700 0 2921400 3704100 0 2715100 2187800 0 55653 2625 50009 467697;467698;467699;467700;467701;467702;467703;467704 370415 370415 1 VFGAAPLENVVRK Unmodified 1398.7983 0.79833407 2625 Q16656 NRF1 Nuclear respiratory factor 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.06 67.144 3 0.0010561 76063 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.524 48.865 93596000 0 0 0 3120100 2920100 7061200 5222000 4657200 5252900 9204300 10489000 8433700 7531000 6193000 23512000 55654 2625 50010 467705;467706;467707;467708;467709;467710;467711;467712;467713;467714;467715;467716 370416;370417;370418;370419;370420;370421;370422;370423;370424;370425 370419 10 VFGAPNVVEDEIDQYLSK Unmodified 2021.9946 0.99458686 3476 Q8TAT6 NPLOC4 Nuclear protein localization protein 4 homolog yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 98.314 94.055 2;3 1.8954E-54 116204 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 190.85 168.53 124710000 0 124710000 0 0 0 0 0 0 0 0 0 0 0 0 0 55655 3476 50011 467717;467718;467719 370426;370427 370426 2 VFGATTNYGK Unmodified 1056.524 0.52400971 712 O96006 ZBED1 Zinc finger BED domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 35.458 34.603 2 0.00068633 44025 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.49 101.72 532600000 213730000 236570000 0 3323000 4732600 7726800 5653000 7276900 0 11489000 9719700 0 5935600 7523000 18916000 55656 712 50012 467720;467721;467722;467723;467724;467725;467726;467727;467728;467729;467730;467731 370428;370429;370430;370431;370432;370433;370434;370435;370436;370437;370438;370439 370433 12 VFGFSLITNK Unmodified 1124.623 0.62299547 728 P00491 PNP Purine nucleoside phosphorylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 84.585 84.741 2 0.0013138 97794 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.69 82.799 38974000 0 0 0 0 0 0 0 0 0 0 3987500 5697500 0 4519900 24769000 55657 728 50013 467732;467733;467734;467735 370440;370441;370442;370443 370440 4 VFGFVAR Unmodified 794.44391 0.44390889 2854 Q68CZ2 TNS3 Tensin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 2 1 1 60.444 60.563 2 0.024368 69063 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 82.939 73.19 75674000 0 0 0 3769500 3835100 0 6986800 4937700 3909700 7644900 7912500 9555200 9743500 6879000 10500000 55658 2854 50014 467736;467737;467738;467739;467740;467741;467742;467743;467744;467745;467746;467747 370444;370445;370446;370447 370444 4 VFGGMNEENMTELLSSGLK Unmodified 2054.9653 0.96527734 4988 Q9UL63 MKLN1 Muskelin yes yes 0 0 0 By MS/MS 2 0 1 1 96.633 91.812 2 2.3145E-13 113786 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 132.97 118.28 19004000 0 19004000 0 0 0 0 0 0 0 0 0 0 0 0 0 55659 4988 50015 467748 370448 370448 1 VFGGTVHK Unmodified 843.46029 0.46028724 1612 P49915 GMPS GMP synthase [glutamine-hydrolyzing] yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 17.809 14.341 2 0.019798 21172 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.472 53.115 1796600000 1296200000 243520000 256830000 0 0 0 0 0 0 0 0 0 0 0 0 55660 1612 50016 467749;467750;467751 370449 370449 1 VFGIQLK Unmodified 803.49052 0.49052473 5031 Q9UNF1 MAGED2 Melanoma-associated antigen D2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 71.085 70.53 2 0.023434 80782 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 85.306 59.197 1492300000 253780000 0 0 55218000 70510000 101120000 92503000 105840000 71888000 111390000 110990000 157190000 107110000 104730000 150060000 55661 5031 50017 467752;467753;467754;467755;467756;467757;467758;467759;467760;467761;467762;467763;467764 370450;370451;370452;370453 370450 4 VFGPGIEGK Unmodified 902.48617 0.48616764 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 42.715 41.436 2 0.007262 56109 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.429 69.905 1262200000 42262000 867900000 124070000 14992000 10438000 20973000 0 15387000 0 22202000 33385000 31208000 0 21327000 58025000 55662 487 50018 467765;467766;467767;467768;467769;467770;467771;467772;467773;467774;467775;467776;467777 370454;370455;370456;370457;370458;370459;370460;370461 370457 6 VFGPGVERSGLK Unmodified 1244.6877 0.68772099 487 O75369 FLNB Filamin-B yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 49.8 43.025 3 0.012916 59232 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.612 32.866 216320000 200920000 15401000 0 0 0 0 0 0 0 0 0 0 0 0 0 55663 487 50019 467778;467779 370462 370462 1 VFGPTIVAHAVPNPDPVTMLQDIK Oxidation (M) 2574.3516 0.35159499 4329 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 yes yes 0 1 0 By MS/MS 2 0 1 1 92.86 84.73 3 0.00013609 109765 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.234 43.957 12672000 12672000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55664 4329 50020 467780 370463;370464 370464 5795 2 VFGPTIVAHAVPNPDPVTMLQDIK Unmodified 2558.3567 0.35668037 4329 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 97.628 89.498 3 0.00029804 115560 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.546 42.745 17617000 17617000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55665 4329 50020 467781 370465 370465 1 VFGTTAGGK Unmodified 836.43922 0.43921744 3629 Q92574 TSC1 Hamartin yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 20.697 16.5 2 0.0096112 21635 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.833 16.834 39084000 14203000 24882000 0 0 0 0 0 0 0 0 0 0 0 0 0 55666 3629 50021 467782;467783 370466 370466 1 VFGTYTDVTPR Unmodified 1254.6245 0.62445203 4583 Q9NQZ5 STARD7 StAR-related lipid transfer protein 7, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 56.267 56.63 2 0.004049 64410 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 91.867 53.075 7990900 0 0 0 0 0 0 3069000 0 0 0 0 0 0 0 4921900 55667 4583 50022 467784;467785;467786 370467;370468 370467 1 VFGVDDNQDYNRPVINEK Unmodified 2121.0127 0.012696536 2759 Q5SW79 CEP170 Centrosomal protein of 170 kDa yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62.331 62.106 3 1.2821E-29 71351 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 111.92 105.55 121790000 0 0 6439000 5190800 8845800 10109000 0 9543600 6348700 12495000 11891000 13040000 10833000 8867700 18189000 55668 2759 50023 467787;467788;467789;467790;467791;467792;467793;467794;467795;467796;467797;467798;467799;467800 370469;370470;370471;370472;370473;370474;370475;370476;370477;370478;370479;370480;370481;370482;370483;370484;370485;370486;370487 370483 19 VFHAGTQQQK Unmodified 1142.5833 0.58325592 4551 Q9NPG3 UBN1 Ubinuclein-1 yes yes 0 0 0 By MS/MS 2 0 1 1 11.406 7.533 2 0.051841 11962 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.981 31.727 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55669 4551 50024 467801 370488 370488 1 VFIDQNLSPGK Unmodified 1216.6452 0.64518747 2387 Q14186 TFDP1 Transcription factor Dp-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 59.033 58.369 2 9.9601E-05 65625 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.76 83.427 286890000 0 104970000 0 9342400 9298800 16356000 14055000 13137000 11941000 15091000 22238000 20483000 10639000 11388000 27956000 55670 2387 50025 467802;467803;467804;467805;467806;467807;467808;467809;467810;467811;467812;467813;467814;467815 370489;370490;370491;370492;370493;370494;370495;370496;370497;370498;370499;370500;370501;370502 370493 14 VFIEDVSR Unmodified 963.50255 0.50254598 737 P00966 ASS1 Argininosuccinate synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 49.933 50.095 2 0.0076415 55238 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.942 18.675 1157400000 0 0 0 32339000 24184000 0 54455000 37681000 0 51866000 162480000 100310000 52783000 133200000 508080000 55671 737 50026 467816;467817;467818;467819;467820;467821;467822;467823;467824;467825;467826 370503;370504;370505;370506;370507;370508;370509;370510;370511;370512;370513;370514 370505 12 VFIEGADAETFSEGEMVTFINWGNLNITK Unmodified 3231.5434 0.5434311 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 100.17 94.333 3 1.9399E-56 119103 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 114.21 111.89 25670000 25670000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55672 848 50027 467827;467828 370515;370516 370516 2 VFIGNLNTALVK Unmodified 1287.7551 0.75507227 4972 Q9UKM9 RALY RNA-binding protein Raly yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.674 80.734 2 4.3631E-05 92923 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 109.66 0 214760000 0 0 0 6438400 10631000 17483000 14199000 15067000 12152000 20812000 15607000 23609000 18066000 18335000 42356000 55673 4972 50028 467829;467830;467831;467832;467833;467834;467835;467836;467837;467838;467839;467840 370517;370518;370519;370520;370521;370522;370523;370524;370525;370526;370527;370528 370520 12 VFIGNLNTLVVK Unmodified 1315.7864 0.7863724 851 P07910;P0DMR1;O60812;B7ZW38;B2RXH8 HNRNPC;HNRNPCL4;HNRNPCL1;HNRNPCL3;HNRNPCL2 Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 84.606 84.671 2 3.366E-08 97161 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 125.48 110.33 752290000 0 0 0 17635000 33525000 64529000 39349000 59105000 41445000 89548000 52514000 76048000 52911000 67532000 158140000 55674 851 50029 467841;467842;467843;467844;467845;467846;467847;467848;467849;467850;467851;467852 370529;370530;370531;370532;370533;370534;370535;370536;370537;370538;370539;370540;370541;370542;370543;370544;370545 370539 17 VFIPHGLIMDR Unmodified 1296.7013 0.70126256 729 P00492 HPRT1 Hypoxanthine-guanine phosphoribosyltransferase yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 76.508 76.644 3 0.0089783 87907 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.879 35.508 24485000 0 0 0 0 0 1607000 0 0 0 0 0 0 0 3140600 19737000 55675 729 50030 467853;467854;467855 370546 370546 1 VFIQHITLSDEER Unmodified 1585.81 0.81002097 2411 Q14527 HLTF Helicase-like transcription factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 65.052 65.286 3 0.00055208 74523 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 61.212 57.094 41148000 0 0 0 0 0 5508900 3522200 2921500 3859500 3376500 4235100 6594600 0 2391000 8738300 55676 2411 50031 467856;467857;467858;467859;467860;467861;467862;467863;467864 370547;370548;370549;370550;370551;370552;370553;370554 370554 8 VFIQHITLSDEERK Unmodified 1713.905 0.90498399 2411 Q14527 HLTF Helicase-like transcription factor yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 3 2 2 2 2 2 2 2 2 56.665 56.843 3;4 1.1556E-17 64097 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 99.927 80.992 742370000 0 0 0 25417000 0 75882000 51176000 56370000 70035000 50638000 53054000 118310000 54078000 48368000 139040000 55677 2411 50032 467865;467866;467867;467868;467869;467870;467871;467872;467873;467874;467875;467876;467877;467878;467879;467880;467881;467882;467883;467884;467885;467886;467887 370555;370556;370557;370558;370559;370560;370561;370562;370563;370564;370565;370566;370567;370568;370569;370570;370571;370572;370573;370574;370575;370576;370577;370578;370579;370580;370581;370582;370583;370584;370585;370586;370587;370588 370586 32 VFIRGGEEFGESK Unmodified 1453.7201 0.72014333 2838 Q63HN8 RNF213 E3 ubiquitin-protein ligase RNF213 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 54.111 48.077 3 0.0017692 66169 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.879 61.827 65353000 64478000 0 874530 0 0 0 0 0 0 0 0 0 0 0 0 55678 2838 50033 467888;467889 370589 370589 1 VFITDDFHDMMPK 2 Oxidation (M) 1626.7058 0.70581517 1002 P14625 HSP90B1 Endoplasmin yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 30 3 3 3 2 3 1 3 3 3 1 3 2 61.646 61.719 2;3 0.00028816 70328 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 68.626 53.935 458420000 0 0 0 35032000 24156000 54528000 32191000 32592000 18663000 60100000 63436000 50644000 29788000 38221000 19072000 55679 1002 50034 467890;467891;467892;467893;467894;467895;467896;467897;467898;467899;467900;467901;467902;467903;467904;467905;467906;467907;467908;467909;467910;467911;467912;467913;467914;467915;467916;467917;467918;467919 370590;370591;370592;370593;370594;370595;370596;370597;370598;370599;370600;370601 370590 1364;1365 2 VFITDDFHDMMPK Oxidation (M) 1610.7109 0.71090055 1002 P14625 HSP90B1 Endoplasmin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 28 1 2 3 3 2 2 1 2 2 3 3 4 74.37 74.477 2;3 2.4356E-07 83377 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 94.122 78.577 327860000 0 0 0 3382400 3410600 47786000 11998000 19093000 17894000 3593300 15188000 19127000 25603000 35694000 125090000 55680 1002 50034 467920;467921;467922;467923;467924;467925;467926;467927;467928;467929;467930;467931;467932;467933;467934;467935;467936;467937;467938;467939;467940;467941;467942;467943;467944;467945;467946;467947 370602;370603;370604;370605;370606;370607;370608;370609;370610;370611 370610 1364;1365 9 VFITDDFHDMMPK Unmodified 1594.716 0.71598593 1002 P14625 HSP90B1 Endoplasmin yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 82.368 82.496 3 0.015205 95043 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 30.905 28.412 38366000 0 0 0 0 0 3974600 0 2650800 0 2186900 0 0 0 0 29554000 55681 1002 50034 467948;467949;467950;467951 370612 370612 1 VFITSDLCGQK Unmodified 1266.6278 0.62782285 4345 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 65.846 60.172 2 1.9333E-09 77453 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 144.09 120.06 116740000 4570000 109580000 2587700 0 0 0 0 0 0 0 0 0 0 0 0 55682 4345 50035 467952;467953;467954;467955 370613;370614;370615;370616 370613 4 VFIYENK Unmodified 911.47527 0.4752686 5370 yes no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 2 62.136 62.405 2 0.049815 70224 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.443 42.961 + 487800000 0 0 0 0 0 30450000 43632000 34581000 32185000 38986000 46296000 85679000 45154000 33898000 96935000 55683 5370 50036 467956;467957;467958;467959;467960;467961;467962;467963;467964;467965;467966 370617 370617 1 VFLALAAK Unmodified 831.52182 0.52182486 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.438 67.52 2 0.013136 78041 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 73.039 29.973 200920000 0 0 0 10411000 11378000 16371000 9815100 9506300 9372400 16642000 16951000 21183000 13586000 19995000 45710000 55684 1986 50037 467967;467968;467969;467970;467971;467972;467973;467974;467975;467976;467977;467978 370618;370619;370620;370621;370622;370623;370624;370625;370626;370627 370627 10 VFLATNSDYK Unmodified 1156.5764 0.57643921 1609 P49902 NT5C2 Cytosolic purine 5'-nucleotidase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49.297 48.236 2 0.0017713 53524 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 95.502 78.991 669050000 23641000 459520000 8873400 9596100 10536000 9471800 12128000 11152000 11282000 12549000 22535000 21845000 17373000 11908000 26635000 55685 1609 50038 467979;467980;467981;467982;467983;467984;467985;467986;467987;467988;467989;467990;467991;467992;467993 370628;370629;370630;370631;370632;370633;370634;370635;370636;370637;370638;370639;370640;370641;370642;370643;370644 370638 17 VFLDPNILSDDGTVALR Unmodified 1843.968 0.96797818 1533 P48147 PREP Prolyl endopeptidase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 91.04 91.189 2 0.0001465 105573 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.258 77.893 11347000 0 0 0 0 0 0 0 0 0 0 1596400 0 0 944670 8805500 55686 1533 50039 467994;467995;467996 370645;370646;370647 370645 3 VFLEDTGQDFPLMPNEESSLPAVEK Oxidation (M) 2807.3211 0.32114231 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 1 0 By MS/MS 3 0 1 1 89.832 86.621 3 0.00022748 103743 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 40.285 33.486 5828500 0 5828500 0 0 0 0 0 0 0 0 0 0 0 0 0 55687 2446 50040 467997 370648 370648 4013 1 VFLENVIR Unmodified 988.57057 0.57056597 1910 P62805 HIST1H4A Histone H4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.17 75.229 2 0.0052859 86598 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 107.43 61.711 1253400000 0 0 0 126130000 62133000 112130000 87292000 97724000 66348000 133900000 98803000 156720000 89796000 75321000 147150000 55688 1910 50041 467998;467999;468000;468001;468002;468003;468004;468005;468006;468007;468008;468009 370649;370650;370651;370652;370653;370654;370655;370656;370657;370658;370659;370660 370650 12 VFLGNVETFIK Unmodified 1265.702 0.70197407 624 O95163 IKBKAP Elongator complex protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87.293 86.314 2 0.0011678 99748 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.496 76.449 311030000 146720000 85410000 10260000 788870 2274800 5184300 2138700 5162000 4707500 10009000 5597500 6517100 3131300 4377500 18755000 55689 624 50042 468010;468011;468012;468013;468014;468015;468016;468017;468018;468019;468020;468021;468022;468023;468024 370661;370662;370663;370664;370665;370666;370667;370668;370669;370670;370671;370672;370673 370666 13 VFLISASSK Unmodified 950.54368 0.54368251 4428 Q9H6Z4 RANBP3 Ran-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS 2.67 0.471 1 2 2 1 64.655 58.586 2 0.041711 58773 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 60.019 30.643 373880000 339770000 34114000 0 0 0 0 0 0 0 0 0 0 0 0 0 55690 4428 50043 468025;468026;468027 370674;370675 370674 2 VFLIYEGYEGLVEGGENIK Unmodified 2128.0728 0.072837177 1063 P17858 PFKL ATP-dependent 6-phosphofructokinase, liver type yes yes 0 0 0 By MS/MS 2 0 1 1 97.2 89.069 3 9.7142E-32 114957 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 125.18 116.32 263540000 263540000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55691 1063 50044 468028 370676 370676 1 VFLLDRGNTR Unmodified 1189.6568 0.65675521 4742 Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 49.926 50.029 3 0.0028339 56393 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 69.276 28.282 64684000 0 0 0 4106200 0 0 7447000 9197700 9447700 0 9510100 0 14436000 10539000 0 55692 4742 50045 468029;468030;468031;468032;468033;468034;468035 370677;370678;370679;370680;370681;370682;370683 370683 7 VFLMSESEK Unmodified 1068.5161 0.51614714 4168 Q9BUQ8 DDX23 Probable ATP-dependent RNA helicase DDX23 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 52.961 51.415 2 0.0085067 58206 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 69.423 43.687 146610000 0 95565000 0 5880700 0 15018000 7514600 0 9702800 0 0 0 0 12929000 0 55693 4168 50046 468036;468037;468038;468039;468040;468041;468042;468043;468044;468045 370684;370685;370686;370687;370688;370689;370690;370691;370692;370693 370685 10 VFLMSESEK Oxidation (M) 1084.5111 0.51106176 4168 Q9BUQ8 DDX23 Probable ATP-dependent RNA helicase DDX23 yes yes 0 1 0 By MS/MS 2 0 1 1 38.661 33.694 2 0.010391 43978 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.498 72.729 52980000 0 52980000 0 0 0 0 0 0 0 0 0 0 0 0 0 55694 4168 50046 468046 370694 370694 5665 1 VFLNGNK Unmodified 790.43374 0.43373813 946 P11388 TOP2A DNA topoisomerase 2-alpha yes yes 0 0 0 By MS/MS 2 0 1 1 30.005 24.384 2 0.03098 34281 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 91.093 44.048 13181000 13181000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55695 946 50047 468047 370695;370696 370695 2 VFLNILPPLTNSK Unmodified 1454.8497 0.84970094 4217 Q9BX10 GTPBP2 GTP-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 2 1 1 91.641 91.783 2 0.0076178 106901 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 45.368 29.739 6535000 0 0 0 0 0 0 0 0 536020 1021400 767790 1902500 0 559230 1748100 55696 4217 50048 468048;468049;468050;468051;468052;468053;468054 370697;370698 370698 2 VFLQDGPAR Unmodified 1001.5294 0.52942943 4947 Q9UJX6 ANAPC2 Anaphase-promoting complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 42.484 42.643 2 0.011616 47891 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 62.546 25.526 24090000 0 0 0 0 0 8907000 0 0 0 8042500 0 0 0 7140800 0 55697 4947 50049 468055;468056;468057;468058 370699;370700;370701 370699 3 VFLQGPAPVGTPSFNR Unmodified 1685.8889 0.88893999 3250 Q8IWZ3 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.094 79.153 2 9.0658E-32 91585 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 174.24 158.35 269920000 0 0 0 10389000 14411000 20933000 17664000 19466000 19762000 26683000 22774000 30257000 24351000 23508000 39726000 55698 3250 50050 468059;468060;468061;468062;468063;468064;468065;468066;468067;468068;468069;468070 370702;370703;370704;370705;370706;370707;370708;370709;370710;370711;370712;370713 370711 10 VFLQQLK Unmodified 874.52764 0.52763852 2299 Q13487 SNAPC2 snRNA-activating protein complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.887 56.017 2 0.023434 63811 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 85.306 51.949 90670000 0 0 0 7421100 7047600 6566000 7863700 6798900 5292400 7582200 9444900 9393000 8668200 6156100 8435600 55699 2299 50051 468071;468072;468073;468074;468075;468076;468077;468078;468079;468080;468081;468082 370714;370715;370716;370717;370718;370719 370716 6 VFLSGMPELR Unmodified 1147.606 0.6059652 4232 Q9BXS5;Q9Y6Q5 AP1M1;AP1M2 AP-1 complex subunit mu-1;AP-1 complex subunit mu-2 yes no 0 0 0 By matching By MS/MS 10 0 2 1 1 80.277 80.441 2 0.0070856 92622 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.221 54.09 9475300 0 0 0 0 0 0 0 0 0 1797600 0 0 0 0 7677700 55700 4232 50052 468083;468084 370720 370720 1 VFMQEFK Unmodified 927.45242 0.45242467 257 O15144 ARPC2 Actin-related protein 2/3 complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 62.09 56.101 2 0.019153 71966 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.59 99.921 1204500000 554010000 451160000 199360000 0 0 0 0 0 0 0 0 0 0 0 0 55701 257 50053 468085;468086;468087 370721;370722;370723;370724;370725;370726;370727 370722 6 VFMQEFK Oxidation (M) 943.44734 0.44733929 257 O15144 ARPC2 Actin-related protein 2/3 complex subunit 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 41.703 36.669 2 0.014252 46228 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 118.06 48.666 780700000 255180000 303910000 221610000 0 0 0 0 0 0 0 0 0 0 0 0 55702 257 50053 468088;468089;468090;468091 370728;370729;370730 370730 344 3 VFMTEPQSTFGK Unmodified 1370.654 0.6540376 18 A4UGR9 XIRP2 Xin actin-binding repeat-containing protein 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 2 2 1 2 2 1 51.105 51.134 2 0.0040657 57619 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 58.676 9.8799 195870000 0 0 0 8502800 7169700 23240000 20749000 13150000 17838000 45222000 0 0 26581000 33419000 0 55703 18 50054 468092;468093;468094;468095;468096;468097;468098;468099;468100;468101;468102;468103;468104 370731;370732;370733;370734;370735;370736;370737;370738;370739 370732 9 VFNELLVLLPDTAK Unmodified 1570.897 0.89704506 3149 Q86UK7 ZNF598 Zinc finger protein 598 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 96.217 96.353 2 0.00034667 111807 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.062 70.529 9011900 0 0 0 0 0 0 0 0 0 3829900 0 0 0 0 5181900 55704 3149 50055 468105;468106 370740;370741 370741 2 VFNETPINPR Unmodified 1185.6142 0.6142217 5267 Q9Y678 COPG1 Coatomer subunit gamma-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.968 49.127 2 0.00047115 55296 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 157.68 134.25 688250000 0 0 0 34079000 39502000 67646000 44114000 43709000 41159000 58713000 71185000 78610000 57256000 59541000 92736000 55705 5267 50056 468107;468108;468109;468110;468111;468112;468113;468114;468115;468116;468117;468118 370742;370743;370744;370745;370746;370747;370748;370749;370750;370751;370752;370753;370754 370747 13 VFNGLSNMGSHTGK Unmodified 1447.6878 0.68779734 2981 Q6UWP8 SBSN Suprabasin yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 43.436 43.559 3 0.010072 49137 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 27.798 22.314 26686000 0 0 0 17380000 0 0 0 3614100 0 0 0 0 0 0 5692200 55706 2981 50057 468119;468120;468121 370755 370755 1 VFNIDLK Unmodified 847.48035 0.48035398 2627 Q16666 IFI16 Gamma-interferon-inducible protein 16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 68.877 68.57 2 0.030787 78536 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 74.415 14.774 213530000 0 86386000 0 6779900 7002000 8518800 8677700 7328800 7745900 11341000 14618000 10117000 13336000 11535000 20149000 55707 2627 50058 468122;468123;468124;468125;468126;468127;468128;468129;468130;468131;468132;468133;468134 370756;370757;370758;370759;370760;370761 370756 6 VFNLGVYR Unmodified 966.5287 0.52870115 433 O60825 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.127 69.205 2 0.0045204 79934 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 110.36 87.054 123920000 0 0 0 7730300 9467700 14582000 11966000 9086300 9654300 11279000 9008100 11755000 9118100 7373300 12905000 55708 433 50059 468135;468136;468137;468138;468139;468140;468141;468142;468143;468144;468145;468146 370762;370763;370764;370765;370766;370767;370768;370769;370770;370771;370772;370773 370773 12 VFNLYPR Unmodified 907.49159 0.49158736 2613 Q16555 DPYSL2 Dihydropyrimidinase-related protein 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 62.414 62.631 2 0.042017 71488 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 67.889 36.585 30027000 0 0 0 0 1864400 0 0 0 0 0 4932100 8605500 0 3795700 10829000 55709 2613 50060 468147;468148;468149;468150;468151 370774 370774 1 VFNNIGADLLTGSESENK Unmodified 1906.9272 0.92723557 2932 Q6P3W7 SCYL2 SCY1-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.4 2.04 1 1 23 2 2 2 2 2 2 1 2 2 2 2 2 2 81.499 81.228 2;3 6.1661E-128 93699 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 252.42 237.04 437490000 0 49559000 0 8476000 16581000 32463000 21600000 32657000 27282000 37600000 41495000 38259000 32136000 35205000 64171000 55710 2932 50061 468152;468153;468154;468155;468156;468157;468158;468159;468160;468161;468162;468163;468164;468165;468166;468167;468168;468169;468170;468171;468172;468173;468174;468175;468176 370775;370776;370777;370778;370779;370780;370781;370782;370783;370784;370785;370786;370787;370788;370789;370790;370791;370792;370793;370794 370781 20 VFNNIGADLLTGSESENKEDGLQNK Unmodified 2691.2988 0.29876738 2932 Q6P3W7 SCYL2 SCY1-like protein 2 yes yes 0 0 1 By matching By MS/MS By MS/MS 10 0 3 1 1 1 79.059 79.176 3 3.8106E-06 91620 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 43.162 37.321 15334000 0 0 0 0 0 0 0 0 0 4819000 0 7124700 3390400 0 0 55711 2932 50062 468177;468178;468179 370795 370795 1 VFNPYTEFK Unmodified 1143.5601 0.56006086 3770 Q96C19 EFHD2 EF-hand domain-containing protein D2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.575 70.647 2 0.0037015 81639 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 114.5 103.63 483710000 0 0 0 16933000 20436000 30019000 30087000 28995000 20017000 57821000 51947000 63158000 31537000 41910000 90852000 55712 3770 50063 468180;468181;468182;468183;468184;468185;468186;468187;468188;468189;468190;468191 370796;370797;370798;370799;370800;370801;370802;370803;370804;370805 370802 10 VFNTGGAPR Unmodified 917.47191 0.47191456 1224 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 23.637 23.799 2 0.0031591 24910 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 92.47 49.996 136250000 0 0 0 14284000 11315000 11224000 9707800 0 8385700 12629000 11334000 0 13624000 16149000 27593000 55713 1224 50064 468192;468193;468194;468195;468196;468197;468198;468199;468200;468201 370806;370807;370808;370809;370810;370811;370812 370806 7 VFNTTPDDLDLHVIYDVSHNIAK Unmodified 2625.3075 0.30748157 5168 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog yes yes 0 0 0 By MS/MS By MS/MS 2.4 0.49 3 2 3 2 95.432 89.867 3;4 4.1783E-16 113878 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 92.95 80.148 120960000 76553000 44407000 0 0 0 0 0 0 0 0 0 0 0 0 0 55714 5168 50065 468202;468203;468204;468205;468206 370813;370814;370815;370816 370816 4 VFNYNTLER Unmodified 1154.572 0.57202253 1358 P35606 COPB2 Coatomer subunit beta' yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.804 55.93 2 0.0037572 63495 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 104.06 74.215 282390000 0 0 0 12570000 10592000 15391000 17041000 25264000 11403000 25160000 33700000 35571000 22835000 25729000 47133000 55715 1358 50066 468207;468208;468209;468210;468211;468212;468213;468214;468215;468216;468217;468218 370817;370818;370819;370820;370821;370822;370823;370824;370825;370826;370827 370823 10 VFPGSTTEDYNLIVIER Unmodified 1951.9891 0.98910755 2262 Q13263 TRIM28 Transcription intermediary factor 1-beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 85.564 85.631 2 1.9827E-26 99297 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 136.99 128.26 103540000 0 0 0 2310800 4802900 6427200 3790100 6941900 6449000 20078000 9471400 10749000 3711300 6733000 22075000 55716 2262 50067 468219;468220;468221;468222;468223;468224;468225;468226;468227;468228;468229;468230 370828;370829;370830;370831;370832;370833;370834;370835;370836;370837;370838;370839;370840;370841;370842;370843 370840 15 VFPHEVNWNK Unmodified 1268.6302 0.63020611 2189 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 0 0 0 By MS/MS 10 0 1 1 49.6 50.311 3 0.0051396 55795 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.108 33.476 29739000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29739000 55717 2189 50068 468231 370844 370844 1 VFPMPLPR Oxidation (M) 971.52626 0.52625831 2467 Q15003 NCAPH Condensin complex subunit 2 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 58.331 58.529 2 0.033417 66428 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 46.663 37.193 77007000 0 0 0 0 5661300 9295700 0 0 4918700 8163600 9544500 11642000 7517200 7242200 13022000 55718 2467 50069 468232;468233;468234;468235;468236;468237;468238;468239;468240 370845;370846;370847 370847 3 VFPMPLPR Unmodified 955.53134 0.53134369 2467 Q15003 NCAPH Condensin complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.655 77.712 2 0.0099045 89767 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 81.381 69.025 156620000 0 0 0 5928100 6393800 17920000 9125000 8931200 5891700 15081000 17056000 16986000 9691400 14086000 29526000 55719 2467 50069 468241;468242;468243;468244;468245;468246;468247;468248;468249;468250;468251;468252 370848;370849;370850;370851;370852;370853;370854;370855;370856;370857;370858;370859 370848 12 VFPSHFTQQR Unmodified 1245.6255 0.62545508 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 36.953 37.135 2;3 0.0068811 40247 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 63.816 15.02 404270000 0 0 0 14946000 15058000 48878000 21972000 21995000 15892000 34894000 31941000 41226000 36249000 41998000 79218000 55720 3119 50070 468253;468254;468255;468256;468257;468258;468259;468260;468261;468262;468263;468264;468265;468266;468267;468268;468269;468270;468271;468272;468273;468274;468275;468276 370860;370861;370862;370863;370864;370865;370866;370867;370868;370869 370868 9 VFPSTNATDMSNK Oxidation (M) 1426.6398 0.6398441 5400 yes yes 0 1 0 By MS/MS 10 0 1 1 52.198 51.668 2 0.0058075 59069 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 44.309 32.262 + 7389600 0 0 0 0 7389600 0 0 0 0 0 0 0 0 0 0 55721 5400 50071 468277 370870 370870 6770 1 VFPWASSLQR Unmodified 1189.6244 0.62439245 3657 Q92766 RREB1 Ras-responsive element-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 78.891 78.932 2 0.026226 91165 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 44.349 30.77 68615000 0 0 0 3161100 2743500 5966200 5498600 10332000 6897600 6626800 7231000 6972800 6060600 7124900 0 55722 3657 50072 468278;468279;468280;468281;468282;468283;468284;468285;468286;468287;468288 370871;370872;370873;370874 370871 4 VFQAENPFDFMENISLEGK Unmodified 2214.0303 0.030320436 3064 Q7LG56 RRM2B Ribonucleoside-diphosphate reductase subunit M2 B yes yes 0 0 0 By MS/MS 2 0 1 1 100.04 95.33 2 1.7238E-51 117944 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.17 126.88 22745000 0 22745000 0 0 0 0 0 0 0 0 0 0 0 0 0 55723 3064 50073 468289 370875 370875 1 VFQDVAQK Unmodified 933.49198 0.4919813 3943 Q96P47 AGAP3 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 no no 0 0 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 24.506 24.758 2 0.0068947 26789 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 91.9 60.896 74289000 0 0 0 5545300 0 7536000 4424300 5812700 4439300 8045700 5266900 8738700 6851000 6325800 11303000 55724 3943 50074 468290;468291;468292;468293;468294;468295;468296;468297;468298;468299;468300 370876;370877;370878;370879;370880;370881;370882;370883 370876 8 VFQEAVVDER Unmodified 1190.5932 0.5931519 3617 Q92540 SMG7 Protein SMG7 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 44.479 44.966 2 0.001444 50073 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 103.55 64.755 40026000 0 0 0 0 0 0 0 0 4848700 0 7800300 8265500 10660000 0 8450800 55725 3617 50075 468301;468302;468303;468304;468305;468306 370884;370885;370886;370887;370888;370889 370889 6 VFQFLNAK Unmodified 965.53345 0.53345218 2006 P83731 RPL24 60S ribosomal protein L24 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.9 2.76 4 25 2 1 1 2 2 2 2 2 2 2 2 2 3 2 2 71.499 71.021 1;2 0.0025523 91041 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.9 91.999 2738500000 77585000 26669000 6679600 149730000 160470000 224520000 190280000 158830000 168210000 229870000 227370000 348770000 250810000 202540000 316150000 55726 2006 50076 468307;468308;468309;468310;468311;468312;468313;468314;468315;468316;468317;468318;468319;468320;468321;468322;468323;468324;468325;468326;468327;468328;468329;468330;468331;468332;468333;468334;468335 370890;370891;370892;370893;370894;370895;370896;370897;370898;370899;370900;370901;370902;370903;370904;370905;370906;370907;370908;370909;370910;370911;370912;370913;370914;370915;370916;370917;370918 370897 28 VFQGTDEQLNDLYHNHQR Unmodified 2213.025 0.024992557 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 57.223 57.472 3;4 0.0018644 64694 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.014 36.281 96180000 0 0 0 0 0 20409000 0 6447200 12271000 9700300 14826000 0 0 20434000 12092000 55727 3676 50077 468336;468337;468338;468339;468340;468341;468342 370919;370920 370920 2 VFQSLPHENK Unmodified 1197.6142 0.6142217 772 P04080 CSTB Cystatin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.16 2.46 2 17 1 1 1 2 1 2 1 1 2 2 1 2 2 31.468 31.211 2;3 0.0010019 33924 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 77.192 63.738 667670000 72929000 0 27484000 11753000 0 43164000 4231000 20641000 16285000 23355000 65898000 76039000 21781000 62491000 221620000 55728 772 50078 468343;468344;468345;468346;468347;468348;468349;468350;468351;468352;468353;468354;468355;468356;468357;468358;468359;468360;468361 370921;370922;370923;370924;370925;370926;370927;370928;370929;370930;370931;370932;370933;370934;370935;370936;370937;370938 370932 15 VFQSLPHENKPLTLSNYQTNK Unmodified 2457.2652 0.26522283 772 P04080 CSTB Cystatin-B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 62.675 63 3 1.6253E-11 71157 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.303 80.303 91161000 0 0 0 0 0 0 0 6555600 0 0 9788500 0 0 9471400 65345000 55729 772 50079 468362;468363;468364;468365 370939;370940;370941;370942;370943 370939 5 VFQSSTSQEQVYNDCAK Unmodified 1989.8738 0.87381979 1328 P33176 KIF5B Kinesin-1 heavy chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.228 40.407 2 3.1297E-47 43992 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 196.38 188.52 199400000 0 0 0 11812000 7344600 16904000 10116000 10689000 10323000 14138000 27169000 25086000 18717000 22355000 24742000 55730 1328 50080 468366;468367;468368;468369;468370;468371;468372;468373;468374;468375;468376;468377 370944;370945;370946;370947;370948;370949;370950;370951;370952;370953;370954;370955 370947 12 VFQTESHMK Oxidation (M) 1121.5175 0.51754412 3453 Q8NG31 CASC5 Protein CASC5 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 11.107 8.0137 2 0.018448 12441 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.301 60.629 12997000 9851900 0 3144700 0 0 0 0 0 0 0 0 0 0 0 0 55731 3453 50081 468378;468379 370956 370956 4990 1 VFQVEYAMK Oxidation (M) 1129.5478 0.54778161 1195 P25788 PSMA3 Proteasome subunit alpha type-3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 50.415 49.241 2 0.002059 55351 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 91.069 74.105 187630000 0 15006000 6567600 19115000 0 0 0 0 0 0 39796000 40857000 0 23899000 42385000 55732 1195 50082 468380;468381;468382;468383;468384;468385;468386;468387;468388;468389;468390 370957;370958;370959;370960;370961;370962;370963;370964;370965;370966;370967 370962 1729 11 VFQVEYAMK Unmodified 1113.5529 0.55286699 1195 P25788 PSMA3 Proteasome subunit alpha type-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 64.481 64.495 2 0.0035031 73628 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 103.56 91.496 81502000 0 0 0 7224100 2742900 0 0 4971000 0 5641900 22798000 21845000 0 16280000 0 55733 1195 50082 468391;468392;468393;468394;468395;468396;468397 370968;370969;370970;370971;370972;370973;370974;370975 370970 8 VFQVLNEK Unmodified 975.53893 0.53893149 1331 P33981 TTK Dual specificity protein kinase TTK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52.286 51.211 2 0.0025212 66849 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.99 85.594 603770000 27280000 34955000 6260600 31208000 31185000 33326000 40480000 46896000 42853000 47480000 50560000 62444000 52155000 44450000 52241000 55734 1331 50083 468398;468399;468400;468401;468402;468403;468404;468405;468406;468407;468408;468409;468410;468411;468412 370976;370977;370978;370979;370980;370981;370982;370983;370984;370985;370986;370987;370988;370989;370990;370991;370992;370993 370979 18 VFRENSDK Unmodified 993.48796 0.48795855 2984 Q6UXN9 WDR82 WD repeat-containing protein 82 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 7.0442 4.1779 2 0.0091778 7375 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 167.04 116.18 323950000 313180000 0 10769000 0 0 0 0 0 0 0 0 0 0 0 0 55735 2984 50084 468413;468414 370994 370994 1 VFRYSTSLEK Unmodified 1228.6452 0.64518747 2475 Q15020 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes yes 0 0 1 By MS/MS 2 0 1 1 50.628 42.727 3 0.0077093 58921 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 59.57 9.4621 109630000 109630000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55736 2475 50085 468415 370995 370995 1 VFSATLGLVDIVK Unmodified 1360.7966 0.79660274 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.25 3.7 3 2 3 2 2 1 1 1 1 93.479 90.763 2 8.4709E-12 114182 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 120.06 93.998 120630000 97661000 15772000 3887700 0 0 0 0 0 0 1134800 663650 0 0 0 1513900 55737 894 50086 468416;468417;468418;468419;468420;468421;468422;468423 370996;370997;370998;370999;371000;371001 371000 5 VFSDEVQQQAQLSTIR Unmodified 1847.9377 0.93774068 5084 Q9Y262 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.133 68.212 2 4.0363E-84 77554 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 187.11 168.37 182490000 0 0 0 5471700 8068300 14854000 8502500 11131000 10230000 22305000 19178000 19651000 12395000 17289000 33413000 55738 5084 50087 468424;468425;468426;468427;468428;468429;468430;468431;468432;468433;468434;468435 371002;371003;371004;371005;371006;371007;371008;371009;371010;371011;371012;371013;371014 371005 13 VFSDVMEDLYNYINPHNGK Unmodified 2254.0365 0.036468446 1171 P23921 RRM1 Ribonucleoside-diphosphate reductase large subunit yes yes 0 0 0 By MS/MS 3 0 1 1 97.663 94.355 3 4.2504E-36 113105 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 124.92 116.28 17881000 0 17881000 0 0 0 0 0 0 0 0 0 0 0 0 0 55739 1171 50088 468436 371015 371015 0 VFSDVMEDLYNYINPHNGK Oxidation (M) 2270.0314 0.031383068 1171 P23921 RRM1 Ribonucleoside-diphosphate reductase large subunit yes yes 0 1 0 By MS/MS 2 0 1 1 90.819 82.689 3 1.7198E-06 107375 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.537 61.202 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55740 1171 50088 468437 371016 371016 1699 1 VFSEDGTSK Unmodified 968.44509 0.44509068 2270 Q13322 GRB10 Growth factor receptor-bound protein 10 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 14.131 14.024 2 0.0037123 13246 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 101.54 82.759 95020000 0 28757000 0 2992300 4045600 5793000 5257100 4523500 4641300 6327600 5255200 6455200 5790500 6458100 8723800 55741 2270 50089 468438;468439;468440;468441;468442;468443;468444;468445;468446;468447;468448;468449;468450 371017;371018;371019;371020;371021;371022;371023;371024;371025;371026 371025 10 VFSGLVSTGLK Unmodified 1106.6336 0.63356015 980 P13639 EEF2 Elongation factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.538 70.614 2 0.00020504 80740 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 107.15 86.529 606920000 0 0 0 18961000 15573000 23839000 22385000 33951000 18788000 26185000 97429000 85779000 28498000 57397000 178140000 55742 980 50090 468451;468452;468453;468454;468455;468456;468457;468458;468459;468460;468461;468462 371027;371028;371029;371030;371031;371032;371033;371034;371035;371036;371037;371038 371036 12 VFSIGPVFR Unmodified 1020.5757 0.57565135 1009 P14868 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 82.096 82.144 2 0.0030241 94971 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 91.626 81.212 125150000 0 0 0 3995700 4679700 16704000 7761300 10971000 8633800 16391000 13758000 19532000 8878400 13847000 0 55743 1009 50091 468463;468464;468465;468466;468467;468468;468469;468470;468471;468472;468473 371039;371040;371041;371042;371043;371044;371045;371046;371047;371048;371049 371040 11 VFSIPEGQK Unmodified 1003.5338 0.53384611 5208 Q9Y4P8 WIPI2 WD repeat domain phosphoinositide-interacting protein 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 49.605 49.881 2 0.0055928 55434 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 77.318 62.648 56247000 0 0 0 0 0 18771000 8373900 0 0 0 0 0 7455200 8898600 12748000 55744 5208 50092 468474;468475;468476;468477;468478;468479;468480 371050;371051;371052;371053;371054;371055;371056 371054 7 VFSLMDPNSPER Oxidation (M) 1406.65 0.65001485 3051 Q7L5D6 GET4 Golgi to ER traffic protein 4 homolog yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 1 2 1 2 2 2 2 2 2 2 2 56.681 56.873 2 1.9138E-05 63608 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.249 94.486 201380000 0 0 0 4859900 6950100 18891000 9699900 18073000 11717000 21975000 18945000 27319000 26725000 17390000 18837000 55745 3051 50093 468481;468482;468483;468484;468485;468486;468487;468488;468489;468490;468491;468492;468493;468494;468495;468496;468497;468498;468499;468500;468501 371057;371058;371059;371060;371061;371062;371063;371064;371065;371066;371067;371068;371069;371070;371071 371060 4679 14 VFSLMDPNSPER Unmodified 1390.6551 0.65510023 3051 Q7L5D6 GET4 Golgi to ER traffic protein 4 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.804 70.876 2 2.2784E-05 80649 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 121.6 121.6 89881000 0 0 0 3722200 4180200 6817100 3989900 8094400 3108900 7609100 8509000 10081000 7488400 8387500 17893000 55746 3051 50093 468502;468503;468504;468505;468506;468507;468508;468509;468510;468511;468512;468513 371072;371073;371074;371075;371076;371077;371078;371079;371080;371081;371082;371083;371084 371075 13 VFSLSSEFK Unmodified 1042.5335 0.53351176 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.478 72.548 2 0.0025815 83632 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 127.56 90.006 502220000 0 0 0 18627000 21794000 36215000 30600000 44172000 26614000 44526000 57217000 53675000 35785000 47872000 85118000 55747 528 50094 468514;468515;468516;468517;468518;468519;468520;468521;468522;468523;468524;468525 371085;371086;371087;371088;371089;371090;371091;371092;371093;371094;371095;371096 371085 10 VFSNGADLSGVTEEAPLK Unmodified 1832.9156 0.91560825 739 P01009 SERPINA1 Alpha-1-antitrypsin;Short peptide from AAT yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS 10 0 9 1 1 1 2 1 1 1 1 75.283 75.267 2 1.801E-26 87104 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 109.22 98.315 73362000 0 0 0 20248000 2533000 2136100 1997700 28666000 0 7396500 0 4817500 5566900 0 0 55748 739 50095 468526;468527;468528;468529;468530;468531;468532;468533;468534 371097;371098;371099;371100;371101;371102 371101 6 VFSPVIR Unmodified 816.48577 0.48577371 3968 Q96RK0 CIC Protein capicua homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.697 52.841 2 0.02459 59770 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 97.596 61.04 120220000 0 0 0 6685400 6609300 11646000 6435700 8736100 8098400 9446000 13416000 12000000 12806000 9770300 14568000 55749 3968 50096 468535;468536;468537;468538;468539;468540;468541;468542;468543;468544;468545;468546 371103;371104;371105 371105 3 VFSVAELQSR Unmodified 1134.6033 0.60332266 3219 Q8IUR0 TRAPPC5 Trafficking protein particle complex subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.248 65.336 2 0.0018498 74731 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 96.331 71.408 230880000 0 0 0 15385000 12533000 17522000 14702000 19585000 13240000 22644000 27367000 26724000 19759000 16545000 24874000 55750 3219 50097 468547;468548;468549;468550;468551;468552;468553;468554;468555;468556;468557;468558 371106;371107;371108;371109;371110;371111;371112;371113;371114;371115;371116;371117 371112 10 VFSVRGTSFDAAATSGGSASSEK Unmodified 2218.0502 0.050204255 988 P13804 ETFA Electron transfer flavoprotein subunit alpha, mitochondrial yes yes 0 0 1 By MS/MS 2 0 1 1 67.104 58.809 3 3.1386E-14 78721 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.211 82.771 33013000 33013000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55751 988 50098 468559 371118 371118 1 VFTAIANQPWAQK Unmodified 1472.7776 0.77759863 2602 Q16401 PSMD5 26S proteasome non-ATPase regulatory subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74.884 73.939 2 1.5822E-75 94180 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 214.83 181.46 323530000 45314000 53458000 0 9339000 12896000 35209000 0 14772000 10729000 19202000 25291000 19249000 17949000 18105000 42015000 55752 2602 50099 468560;468561;468562;468563;468564;468565;468566;468567;468568;468569;468570;468571;468572;468573 371119;371120;371121;371122;371123;371124;371125;371126;371127;371128;371129;371130;371131;371132;371133;371134;371135;371136 371126 18 VFTASCDK Unmodified 926.41677 0.41676744 1981 P78406 RAE1 mRNA export factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 15.637 15.277 2 0.0088311 18219 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.11 119.19 393170000 0 166920000 0 11334000 8998500 10333000 18012000 16466000 13903000 14429000 25257000 25157000 27142000 32348000 22867000 55753 1981 50100 468574;468575;468576;468577;468578;468579;468580;468581;468582;468583;468584;468585;468586;468587 371137;371138;371139;371140;371141 371138 5 VFTESEDR Unmodified 981.44034 0.44033966 5085 Q9Y263 PLAA Phospholipase A-2-activating protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 16.621 17.017 2 0.02755 15600 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 57.281 31.454 13704000 0 0 0 0 0 0 0 0 0 1465700 2104200 2508800 0 1868000 5757300 55754 5085 50101 468588;468589;468590;468591;468592 371142 371142 1 VFTESEDRTASAEEIK Unmodified 1810.8585 0.85848731 5085 Q9Y263 PLAA Phospholipase A-2-activating protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.818 38.997 3 0.00019342 42787 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 68.173 57.357 324470000 0 0 0 13211000 10825000 38361000 17859000 10374000 14040000 35143000 43332000 38331000 20173000 23727000 59091000 55755 5085 50102 468593;468594;468595;468596;468597;468598;468599;468600;468601;468602;468603;468604 371143;371144;371145;371146;371147;371148;371149;371150;371151;371152;371153;371154;371155 371153 13 VFTGVVTK Unmodified 849.496 0.49600404 3255 Q8IX12 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.422 37.602 2 0.022739 40760 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.91 36.016 966280000 0 0 0 48670000 49301000 57433000 73407000 71616000 51971000 82794000 84205000 142820000 82577000 72426000 149060000 55756 3255 50103 468605;468606;468607;468608;468609;468610;468611;468612;468613;468614;468615;468616 371156;371157;371158;371159;371160;371161;371162;371163 371161 5 VFTSNPTPAVLCFR Unmodified 1607.813 0.81299786 2174 Q0JRZ9 FCHO2 F-BAR domain only protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 2 1 1 1 1 91.489 91.516 2 0.00065127 106383 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 64.711 42.684 8522900 0 0 0 1535500 1243400 0 713540 0 0 0 1630600 1687900 1122500 589410 0 55757 2174 50104 468617;468618;468619;468620;468621;468622;468623;468624;468625 371164;371165;371166;371167;371168;371169;371170;371171;371172;371173 371167 10 VFTSWTGGGAAASR Unmodified 1366.663 0.6629628 75 CON__P15636 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.34 2.2 52 1 589 23 14 16 40 38 36 44 45 50 53 41 104 47 37 54 82.894 82.92 1;2;3 1.7122E-72 74899 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 189.17 171.35 + 586660000000 254860000 112950000 42465000 32493000000 38396000000 72445000000 33495000000 37996000000 67547000000 67375000000 69209000000 1942800000 65441000000 45027000000 54886000000 55758 75 50105 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371313 1242 VFTTNNGR Unmodified 907.45118 0.45117911 151 O00422 SAP18 Histone deacetylase complex subunit SAP18 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 11.815 11.965 2 0.03661 10941 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 51.787 34.226 27725000 0 0 0 2289800 0 3530900 3228100 2602000 2456400 0 3700800 0 3921600 0 5995500 55759 151 50106 469268;469269;469270;469271;469272;469273;469274;469275 372437 372437 1 VFTTVGSAEK Unmodified 1037.5393 0.53932542 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 30.648 30.99 2 0.0039934 32646 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.464 17.183 101540000 0 0 0 0 0 11461000 6106200 0 0 14312000 10470000 16467000 0 14291000 28437000 55760 1565 50107 469276;469277;469278;469279;469280;469281;469282 372438;372439;372440;372441;372442;372443;372444;372445 372441 8 VFVDLLPATQCTK Unmodified 1490.7803 0.78030075 2465 Q14CX7 NAA25 N-alpha-acetyltransferase 25, NatB auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.3 2.1 1 9 1 2 2 2 1 1 1 81.81 81.64 2;3 0.0019922 94261 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 55.261 42.879 464560000 0 2631600 0 0 0 0 85214000 167030000 185410000 5646800 6071100 12564000 0 0 0 55761 2465 50108 469283;469284;469285;469286;469287;469288;469289;469290;469291;469292 372446;372447;372448;372449;372450;372451;372452;372453;372454 372447 8 VFVEDDENSSQK Unmodified 1395.6154 0.61540349 4997 Q9ULJ3 ZBTB21 Zinc finger and BTB domain-containing protein 21 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 26.026 25.585 2 3.1725E-08 26409 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 132.91 129.77 188920000 0 25721000 0 8991000 11133000 15499000 12725000 9407800 9455000 11870000 16327000 19832000 17976000 12238000 17747000 55762 4997 50109 469293;469294;469295;469296;469297;469298;469299;469300;469301;469302;469303;469304;469305;469306 372455;372456;372457;372458;372459;372460;372461;372462;372463;372464;372465;372466 372462 12 VFVESVLR Unmodified 947.54402 0.54401687 1122 P21283;Q8NEY4 ATP6V1C1;ATP6V1C2 V-type proton ATPase subunit C 1;V-type proton ATPase subunit C 2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 66.838 66.914 2 0.011381 75792 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.058 41.178 45646000 0 0 0 1757100 1587800 4816900 2394600 2708700 0 4323100 6141300 4710900 2920200 4603400 9681800 55763 1122 50110 469307;469308;469309;469310;469311;469312;469313;469314;469315;469316;469317 372467;372468;372469;372470;372471;372472;372473 372470 7 VFVFFDLTVDDQSVYPK Unmodified 2018.0037 0.0036949795 715 O96017 CHEK2 Serine/threonine-protein kinase Chk2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 99.34 93.512 3 0.0075608 118274 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 37.583 28.022 7594700 7594700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55764 715 50111 469318;469319 372474;372475 372475 2 VFVGEVVEEALDVCEK Unmodified 1820.8866 0.88661631 2546 Q15544 TAF11 Transcription initiation factor TFIID subunit 11 yes yes 0 0 0 By MS/MS 2 0 1 1 97.641 89.51 3 0.0087633 115587 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 22.299 0 9028500 9028500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55765 2546 50112 469320 372476 372476 1 VFVGGLSPDTSEEQIK Unmodified 1704.857 0.85703074 236 O14979 HNRNPDL Heterogeneous nuclear ribonucleoprotein D-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 71.196 70.069 2 1.2128E-41 84224 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 186.46 174.1 4125500000 73033000 3443200000 26530000 20720000 20637000 23920000 33914000 31036000 23247000 35202000 77690000 101550000 38924000 53921000 122000000 55766 236 50113 469321;469322;469323;469324;469325;469326;469327;469328;469329;469330;469331;469332;469333;469334;469335;469336;469337 372477;372478;372479;372480;372481;372482;372483;372484;372485;372486;372487;372488;372489;372490;372491;372492;372493;372494 372484 18 VFVMPNGMLK 2 Oxidation (M) 1166.5828 0.58278691 1844 P61289 PSME3 Proteasome activator complex subunit 3 yes yes 0 2 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.4 3.2 3 12 1 1 1 1 2 2 1 1 2 1 1 1 51.113 49.386 2 0.0049921 55671 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 50.127 44.205 147160000 37260000 32070000 4985800 0 6685200 21573000 13531000 0 0 0 13758000 0 9980700 7316800 0 55767 1844 50114 469338;469339;469340;469341;469342;469343;469344;469345;469346;469347;469348;469349;469350;469351;469352 372495;372496;372497;372498;372499;372500;372501;372502;372503 372495 2998;2999 9 VFVMPNGMLK Oxidation (M) 1150.5879 0.58787229 1844 P61289 PSME3 Proteasome activator complex subunit 3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.61 3.03 4 19 2 1 1 2 1 1 1 2 2 2 2 1 1 2 2 66.88 65.789 2 0.0023799 73348 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.854 57.946 343670000 144510000 34634000 4477300 10877000 4806600 11169000 6476600 10625000 2817700 15263000 25635000 13420000 3933900 17083000 37943000 55768 1844 50114 469353;469354;469355;469356;469357;469358;469359;469360;469361;469362;469363;469364;469365;469366;469367;469368;469369;469370;469371;469372;469373;469374;469375 372504;372505;372506;372507;372508;372509;372510;372511;372512;372513;372514;372515;372516;372517;372518;372519;372520;372521;372522 372510 2998;2999 16 VFVMPNGMLK Unmodified 1134.593 0.59295767 1844 P61289 PSME3 Proteasome activator complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79.349 78.469 2 0.0067198 90767 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.207 44.43 544070000 317420000 3300400 15395000 5540500 5847200 15156000 7392500 11756000 5855400 18484000 19088000 19823000 9867700 18100000 71044000 55769 1844 50114 469376;469377;469378;469379;469380;469381;469382;469383;469384;469385;469386;469387;469388;469389;469390 372523;372524;372525;372526;372527;372528;372529;372530;372531;372532;372533 372532 5 VFVSLPTELEDLIPEVEEFYK Unmodified 2495.2723 0.27232485 3704 Q93034 CUL5 Cullin-5 yes yes 0 0 0 By MS/MS By MS/MS 2.4 0.49 3 2 1 4 104.17 99.194 2;3 0.00092144 123571 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.108 64.124 29632000 19430000 10202000 0 0 0 0 0 0 0 0 0 0 0 0 0 55770 3704 50115 469391;469392;469393;469394;469395 372534;372535;372536 372534 3 VFVVMEK Unmodified 850.46226 0.46226107 4273;587 O94806;Q15139;Q9BZL6 PRKD3;PRKD1;PRKD2 Serine/threonine-protein kinase D3;Serine/threonine-protein kinase D1;Serine/threonine-protein kinase D2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.446 51.595 2 0.025177 58383 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 81.297 55.47 227010000 0 0 0 12000000 17486000 17250000 13252000 18143000 13155000 19055000 28476000 25276000 19565000 15762000 27588000 55771 587;4273 50116 469396;469397;469398;469399;469400;469401;469402;469403;469404;469405;469406;469407 372537;372538;372539;372540;372541;372542;372543;372544;372545;372546;372547;372548 372537 12 VFVVMEK Oxidation (M) 866.45718 0.45717569 4273;587 O94806;Q15139;Q9BZL6 PRKD3;PRKD1;PRKD2 Serine/threonine-protein kinase D3;Serine/threonine-protein kinase D1;Serine/threonine-protein kinase D2 no no 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 36.177 36.307 2 0.041437 39767 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 53.351 32.87 90740000 0 0 0 4865100 8064700 7034700 8450400 7413700 6143800 10283000 9124000 11309000 11430000 6622500 0 55772 587;4273 50116 469408;469409;469410;469411;469412;469413;469414;469415;469416;469417;469418 372549;372550;372551 372549 3 VFYELQHSDKPVGTK Unmodified 1746.8941 0.89408495 3702 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 1 2 1 2 2 2 2 2 2 1 2 43.618 43.863 3;4 3.249E-28 49207 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 119.31 113.48 696840000 0 0 0 13381000 7172600 58134000 16934000 56767000 44081000 114170000 71212000 90164000 63021000 26595000 135200000 55773 3702 50117 469419;469420;469421;469422;469423;469424;469425;469426;469427;469428;469429;469430;469431;469432;469433;469434;469435;469436;469437;469438;469439 372552;372553;372554;372555;372556;372557;372558;372559;372560;372561;372562;372563;372564;372565;372566;372567 372553 14 VFYIGLR Unmodified 866.50142 0.50142377 4298 Q9GZP4 PITHD1 PITH domain-containing protein 1 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 74.616 74.697 2 0.033387 85438 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.021 53.066 22404000 0 0 0 2935300 0 0 0 2842500 0 0 0 5268800 0 3426600 7930900 55774 4298 50118 469440;469441;469442;469443;469444 372568 372568 1 VFYPSNK Unmodified 853.4334 0.43340378 1782 P56282 POLE2 DNA polymerase epsilon subunit 2 yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 30.625 25.569 2 0.024805 33869 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.69 66.197 102380000 48091000 54292000 0 0 0 0 0 0 0 0 0 0 0 0 0 55775 1782 50119 469445;469446 372569 372569 1 VFYYLVQDLK Unmodified 1286.6911 0.69107503 3734;1846 Q96A72;P61326 MAGOHB;MAGOH Protein mago nashi homolog 2;Protein mago nashi homolog no no 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 84.334 84.477 2 0.020352 97493 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.032 46.509 15081000 0 0 0 0 0 0 0 0 0 0 0 0 0 2358200 12723000 55776 3734;1846 50120 469447;469448 372570 372570 1 VGAAEEELQK Unmodified 1072.5401 0.5400537 4817 Q9P2E9 RRBP1 Ribosome-binding protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 26.765 22.527 2 0.0032923 29763 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.311 58.753 51329000 0 51329000 0 0 0 0 0 0 0 0 0 0 0 0 0 55777 4817 50121 469449;469450 372571;372572 372572 2 VGAAEIISR Unmodified 914.51853 0.5185304 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.201 41.38 2 1.7586E-05 45947 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 152.63 57.1 1464200000 0 0 0 64583000 83657000 99112000 103060000 94252000 73264000 140840000 128310000 195150000 148410000 138540000 194980000 55778 516 50122 469451;469452;469453;469454;469455;469456;469457;469458;469459;469460;469461;469462 372573;372574;372575;372576;372577;372578;372579;372580;372581;372582;372583;372584;372585;372586;372587 372576 15 VGAAGPAPGTGSGPLR Unmodified 1363.7208 0.72081203 2774 Q5T447 HECTD3 E3 ubiquitin-protein ligase HECTD3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 40.272 40.455 2 0.00042798 44081 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.944 48.354 54545000 0 0 0 3453000 4423800 3678600 4489300 3859100 0 6552700 6577500 6705200 4148900 4031400 6625900 55779 2774 50123 469463;469464;469465;469466;469467;469468;469469;469470;469471;469472;469473 372588;372589;372590;372591;372592;372593;372594;372595;372596;372597 372591 10 VGAAISMTYITSK Oxidation (M) 1356.6959 0.69590241 863 P08240 SRPR Signal recognition particle receptor subunit alpha yes yes 0 1 0 By MS/MS 2 0 1 1 13.862 9.8671 3 0.0034299 15053 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.452 26.688 8053200 8053200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55780 863 50124 469474 372598 372598 1101 1 VGADLQDDMRR Unmodified 1274.6037 0.60373336 3054 Q7L5Y1 ENOSF1 Mitochondrial enolase superfamily member 1 yes yes 0 0 1 By MS/MS 10 0 1 1 34.559 35.287 3 0.023743 37800 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 31.478 22.474 13814000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13814000 55781 3054 50125 469475 372599 372599 1 VGADLSHVFCASAAAPVIK Unmodified 1911.9877 0.98766776 3235 Q8IW45 CARKD ATP-dependent (S)-NAD(P)H-hydrate dehydratase yes yes 0 0 0 By MS/MS 2 0 1 1 86.816 78.686 3 1.3848E-06 102522 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.455 80.795 12292000 12292000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55782 3235 50126 469476 372600 372600 1 VGAEDADGIDMAYR Oxidation (M) 1497.6406 0.64057238 1578 P49588 AARS Alanine--tRNA ligase, cytoplasmic yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 2 2 1 1 1 2 2 2 2 2 45.706 45.911 2 2.5961E-19 50282 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 134.13 127.28 250130000 0 0 0 10900000 3805600 20035000 12183000 5602200 3993800 8651700 31521000 32833000 19972000 27979000 72655000 55783 1578 50127 469477;469478;469479;469480;469481;469482;469483;469484;469485;469486;469487;469488;469489;469490;469491;469492;469493;469494;469495;469496;469497 372601;372602;372603;372604;372605;372606;372607;372608;372609;372610;372611;372612;372613;372614 372604 2542 13 VGAEDADGIDMAYR Unmodified 1481.6457 0.64565776 1578 P49588 AARS Alanine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 57.667 57.696 2 2.1435E-44 65002 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 207.29 196.13 150050000 0 0 0 5463600 6347900 0 0 10666000 0 0 24561000 0 0 33539000 69471000 55784 1578 50127 469498;469499;469500;469501;469502;469503;469504;469505;469506;469507 372615;372616;372617;372618;372619;372620;372621;372622;372623;372624;372625;372626 372617 11 VGAEELTADQNLK Unmodified 1386.6991 0.69907354 1778 P56182 RRP1 Ribosomal RNA processing protein 1 homolog A yes yes 0 0 0 By MS/MS 2 0 1 1 52.015 46.242 2 0.0042288 60070 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.66 79.078 13295000 0 13295000 0 0 0 0 0 0 0 0 0 0 0 0 0 55785 1778 50128 469508 372627 372627 1 VGAERNVLIFDLGGGTFDVSILTIEDGIFEVK Unmodified 3422.7973 0.7973376 934 P11142 HSPA8 Heat shock cognate 71 kDa protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 103.27 98.785 3 1.5691E-67 123109 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 115.3 113.27 49495000 35559000 12012000 1924500 0 0 0 0 0 0 0 0 0 0 0 0 55786 934 50129 469509;469510;469511;469512;469513 372628;372629;372630;372631;372632;372633 372631 6 VGAFNVGK Unmodified 790.43374 0.43373813 4370 Q9H2M9 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 33.851 34.137 2 0.0067842 37474 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 97.071 56.968 62083000 0 0 0 0 4728800 0 6795300 0 0 8497600 8422400 11361000 0 8207300 14070000 55787 4370 50130 469514;469515;469516;469517;469518;469519;469520 372634;372635;372636;372637;372638 372635 5 VGAFNVGKHCR Unmodified 1243.6244 0.62440923 4370 Q9H2M9 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes yes 0 0 1 By MS/MS 10 0 1 1 6.4236 6.4057 3 0.041974 4392 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 33.225 11.179 1046100 0 0 0 0 0 1046100 0 0 0 0 0 0 0 0 0 55788 4370 50131 469521 372639 372639 1 VGAGAGAAPFR Unmodified 972.51411 0.51411372 3997 Q96T37 RBM15 Putative RNA-binding protein 15 yes yes 0 0 0 By MS/MS 10 0 1 1 35.504 35.561 2 0.027035 39214 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 55.37 4.4041 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55789 3997 50132 469522 372640 372640 1 VGAGAGAAPFREVDEISPEDDQR Unmodified 2385.1197 0.1196808 3997 Q96T37 RBM15 Putative RNA-binding protein 15 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 68.573 68.702 3 8.32E-06 78738 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 52.72 38.848 3897700 0 0 0 0 0 0 0 0 0 0 0 0 3897700 0 0 55790 3997 50133 469523;469524;469525;469526 372641;372642;372643;372644 372641 4 VGAGDSQLK Unmodified 873.4556 0.45559579 1474 P43246 MSH2 DNA mismatch repair protein Msh2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 12.91 13.121 2 0.017806 12315 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 55.37 21.854 126440000 0 0 0 9270500 0 12283000 0 0 0 19693000 18759000 20930000 13277000 0 32227000 55791 1474 50134 469527;469528;469529;469530;469531;469532;469533 372645;372646;372647 372646 2 VGAHAGEYGAEALER Unmodified 1528.727 0.72701962 1969 P69905 HBA1 Hemoglobin subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 5 2 2 1 40.148 40.08 3 4.5451E-07 43922 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 64.244 7.7165 59630000 0 0 0 35068000 0 0 0 20125000 0 0 0 0 4436600 0 0 55792 1969 50135 469534;469535;469536;469537;469538 372648;372649;372650;372651 372650 3 VGAIPANALDDGQWSQGLISAAR Unmodified 2309.1764 0.17640782 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 88.35 88.503 3 1.2307E-08 102626 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 62.19 58.528 29130000 0 0 0 0 0 0 0 1445800 0 6229400 3502700 0 0 2683300 15269000 55793 5187 50136 469539;469540;469541;469542;469543 372652;372653;372654;372655;372656;372657 372652 6 VGAIVEVK Unmodified 813.496 0.49600404 2688 Q4LE39 ARID4B AT-rich interactive domain-containing protein 4B yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 43.438 38.477 2 0.051144 47849 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 66.073 21.381 91096000 0 91096000 0 0 0 0 0 0 0 0 0 0 0 0 0 55794 2688 50137 469544;469545 372658 372658 1 VGALDVPASQFLGSATSPGPR Unmodified 2026.0484 0.048353761 1602 P49815 TSC2 Tuberin yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 1 1 1 1 1 2 2 2 2 2 2 84.855 84.943 2;3 1.0424E-20 97600 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 112.15 89.237 108560000 0 0 0 3995600 6679000 6926300 6219300 9242400 6600000 14526000 11005000 13344000 8450100 8397200 13176000 55795 1602 50138 469546;469547;469548;469549;469550;469551;469552;469553;469554;469555;469556;469557;469558;469559;469560;469561;469562;469563 372659;372660;372661;372662;372663;372664;372665;372666;372667;372668;372669;372670;372671;372672;372673;372674 372671 16 VGAPTIPDSCLPLGMSQEDNQLK Unmodified 2469.188 0.18796006 3695 Q92989 CLP1 Polyribonucleotide 5'-hydroxyl-kinase Clp1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 7 3.69 1 1 3 2 1 1 1 85.33 83.802 3 6.3144E-38 103375 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.74 107.94 185360000 0 160740000 0 0 0 0 0 0 0 9614300 0 6369100 0 0 8632200 55796 3695 50139 469564;469565;469566;469567;469568 372675;372676;372677;372678;372679;372680 372676 6 VGAPTIPDSCLPLGMSQEDNQLK Oxidation (M) 2485.1829 0.18287469 3695 Q92989 CLP1 Polyribonucleotide 5'-hydroxyl-kinase Clp1 yes yes 0 1 0 By MS/MS 2 0 1 1 83.575 78.855 3 9.0417E-05 98059 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.619 52.532 65634000 0 65634000 0 0 0 0 0 0 0 0 0 0 0 0 0 55797 3695 50139 469569 372681;372682 372682 5263 2 VGASASDGSVCVLDLR Unmodified 1604.7828 0.78281994 4270;443 Q9BZK7;O60907 TBL1XR1;TBL1X F-box-like/WD repeat-containing protein TBL1XR1;F-box-like/WD repeat-containing protein TBL1X no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 72.793 72.908 2 0.0014354 83407 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.135 38.539 46350000 0 0 0 0 3021900 4073700 3642100 0 2070900 4533800 5207300 7410100 3757000 5292800 7340000 55798 4270;443 50140 469570;469571;469572;469573;469574;469575;469576;469577;469578;469579 372683;372684;372685;372686 372684 4 VGASASDGSVCVLDLRK Unmodified 1732.8778 0.87778296 4270;443 Q9BZK7;O60907 TBL1XR1;TBL1X F-box-like/WD repeat-containing protein TBL1XR1;F-box-like/WD repeat-containing protein TBL1X no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 61.73 60.39 3 1.2163E-25 68421 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 109.04 85.21 781570000 31894000 78553000 70338000 18072000 27464000 36847000 39954000 37412000 38399000 49821000 61189000 68852000 51773000 61773000 109230000 55799 4270;443 50141 469580;469581;469582;469583;469584;469585;469586;469587;469588;469589;469590;469591;469592;469593;469594;469595 372687;372688;372689;372690;372691;372692;372693;372694;372695;372696;372697;372698;372699;372700;372701 372699 13 VGASEAALFLK Unmodified 1104.6179 0.61791009 4836 Q9UBC2 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.193 74.254 2 0.0013675 86278 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 73.233 42.16 103180000 0 0 0 5475300 4214700 5346600 6644900 8824200 5523300 12641000 9730500 9686200 9104800 7876100 18116000 55800 4836 50142 469596;469597;469598;469599;469600;469601;469602;469603;469604;469605;469606;469607 372702;372703;372704;372705;372706;372707 372707 4 VGAVDADK Unmodified 773.39193 0.3919329 2496 Q15084 PDIA6 Protein disulfide-isomerase A6 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 8.5 3.35 1 5 1 1 1 1 1 1 24.435 25.349 2 0.013039 6077 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 73.26 23.902 47529000 19263000 0 0 3000700 4109700 8895100 0 5096800 0 0 7163200 0 0 0 0 55801 2496 50143 469608;469609;469610;469611;469612;469613 372708;372709;372710 372708 3 VGCPVLALEVLSK Unmodified 1383.7796 0.77957246 3502 Q8TDJ6 DMXL2 DmX-like protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 95.29 87.16 2 0.038162 112708 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.903 52.903 10886000 10886000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55802 3502 50144 469614 372711 372711 1 VGDAIPAVEVFEGEPGNK Unmodified 1826.905 0.90504357 1263 P30044 PRDX5 Peroxiredoxin-5, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.79 3.88 10 3 11 4 6 3 1 1 1 1 1 1 1 1 1 1 1 84.033 82.501 2;3 8.1671E-47 98009 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 134.99 117.18 2309600000 83488000 1773200000 169700000 5374500 5432600 11173000 10281000 9823900 7806400 13760000 46267000 41599000 7179100 0 124490000 55803 1263 50145 469615;469616;469617;469618;469619;469620;469621;469622;469623;469624;469625;469626;469627;469628;469629;469630;469631;469632;469633;469634;469635;469636;469637;469638 372712;372713;372714;372715;372716;372717;372718;372719;372720;372721;372722;372723;372724;372725;372726;372727;372728;372729;372730 372720 18 VGDCVFIK Unmodified 936.47389 0.47388839 3143 Q86U86 PBRM1 Protein polybromo-1 yes yes 0 0 0 By MS/MS 10 0 1 1 48.977 49.206 2 0.037577 54657 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 51.335 21.15 7714200 0 0 0 0 0 0 0 0 0 0 0 0 0 7714200 0 55804 3143 50146 469639 372731 372731 1 VGDDPAVWQLK Unmodified 1226.6295 0.62953741 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 69.662 69.087 2 6.249E-13 79071 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 162.8 146.66 1113100000 0 816630000 0 14294000 10385000 37558000 18803000 15325000 12717000 30495000 28648000 30339000 22160000 22866000 52880000 55805 5187 50147 469640;469641;469642;469643;469644;469645;469646;469647;469648;469649;469650;469651;469652;469653 372732;372733;372734;372735;372736;372737;372738;372739;372740;372741;372742;372743;372744;372745;372746;372747;372748;372749 372746 15 VGDDVEFEVSSDRR Unmodified 1608.738 0.73797824 517 O75534 CSDE1 Cold shock domain-containing protein E1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 47.108 47.535 3 0.012438 53040 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 45.115 30.084 71247000 0 0 0 0 0 0 0 0 5453800 9971000 0 13719000 8435800 0 33667000 55806 517 50148 469654;469655;469656;469657;469658 372750;372751 372751 1 VGDFGDAINWPTPGEIAHK Unmodified 2022.9799 0.97993984 2961 Q6PKG0 LARP1 La-related protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 83.188 83.378 3 0.0064919 96185 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 31.098 27.81 9974700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9974700 55807 2961 50149 469659 372752 372752 1 VGDFVATDLDTGRPSTTVR Unmodified 2006.0069 0.006882877 2075 Q02413 DSG1 Desmoglein-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 65.442 65.526 3 7.1625E-13 75732 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 91.475 71.107 2319000000 0 0 0 300650000 135880000 177640000 120250000 583010000 107250000 0 173230000 283540000 204370000 126370000 106850000 55808 2075 50150 469660;469661;469662;469663;469664;469665;469666;469667;469668;469669;469670 372753;372754;372755;372756;372757;372758;372759;372760;372761;372762;372763;372764 372764 11 VGDGDLSAEEIPENEVSLRR Unmodified 2184.0659 0.065854319 2432 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 68.201 68.24 3 6.2092E-21 77978 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 94.01 77.888 77952000 0 0 0 3099000 3554800 7071900 4614200 8134600 6621200 8910800 9327100 12808000 7046900 6763800 0 55809 2432 50151 469671;469672;469673;469674;469675;469676;469677;469678;469679;469680;469681 372765;372766;372767;372768;372769;372770;372771;372772;372773;372774;372775;372776;372777;372778 372768 13 VGDGMNAYMAYR 2 Oxidation (M) 1378.5646 0.56457067 428 O60749 SNX2 Sorting nexin-2 yes yes 0 2 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 32.267 32.565 2 0.0013976 35610 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 57.96 46.47 11454000 0 0 0 0 0 2695700 0 0 0 1980000 0 5099900 0 1678400 0 55810 428 50152 469682;469683;469684;469685;469686 372779;372780;372781 372779 547;548 3 VGDGMNAYMAYRVTTK Unmodified 1775.8335 0.8334753 428 O60749 SNX2 Sorting nexin-2 yes yes 0 0 1 By MS/MS 2 0 1 1 72.436 64.197 3 0.021705 85286 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 44.601 38.02 5046600 5046600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55811 428 50153 469687 372782 372782 0 VGDLLPHVSSPK Unmodified 1247.6874 0.68738664 3435 Q8NEZ3 WDR19 WD repeat-containing protein 19 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 65.862 58.756 3 0.017722 75634 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 33.782 24.976 28528000 19174000 9353600 0 0 0 0 0 0 0 0 0 0 0 0 0 55812 3435 50154 469688;469689 372783;372784 372783 2 VGDPPQPLPEEPMEVQGAER Unmodified 2174.0314 0.031383068 1502 P46379 BAG6 Large proline-rich protein BAG6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 2 1 1 1 1 1 1 2 2 70.778 70.854 2;3 7.1992E-12 81505 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 83.849 78.639 61754000 0 0 0 3375200 3427800 10014000 3355200 6785900 2936500 0 5593600 0 4854200 7753200 13658000 55813 1502 50155 469690;469691;469692;469693;469694;469695;469696;469697;469698;469699;469700;469701;469702;469703 372785;372786;372787;372788;372789;372790;372791;372792;372793;372794;372795;372796 372790 12 VGDPPQPLPEEPMEVQGAER Oxidation (M) 2190.0263 0.02629769 1502 P46379 BAG6 Large proline-rich protein BAG6 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 61.25 61.328 3 1.0806E-05 69904 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.009 34.135 35705000 0 0 0 0 5056400 0 0 0 4154100 0 0 16234000 10260000 0 0 55814 1502 50155 469704;469705;469706;469707 372797;372798;372799;372800 372800 2373 4 VGDPQELNGITR Unmodified 1297.6626 0.66262845 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 2 1 1 2 1 1 2 2 1 2 1 2 58.841 58.968 2 7.4564E-34 54014 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 172.8 146.29 1639000000 0 0 0 78133000 49697000 198540000 88684000 58415000 60344000 207820000 176710000 163880000 109530000 138830000 308400000 55815 1565 50156 469708;469709;469710;469711;469712;469713;469714;469715;469716;469717;469718;469719;469720;469721;469722;469723;469724;469725 372801;372802;372803;372804;372805;372806;372807;372808;372809;372810;372811;372812;372813;372814 372801 14 VGDQILLAIK Unmodified 1068.6543 0.6542956 2919 Q6P1L8 MRPL14 39S ribosomal protein L14, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 84.239 79.495 2 0.004423 98824 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.698 64.804 12104000 0 12104000 0 0 0 0 0 0 0 0 0 0 0 0 0 55816 2919 50157 469726 372815 372815 1 VGDQVWLFIDEPR Unmodified 1572.7936 0.79364262 1578 P49588 AARS Alanine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS 10 0 1 1 90.567 90.706 2 0.005598 105057 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.676 39.931 1550900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1550900 55817 1578 50158 469727 372816 372816 1 VGDSDGSSNLDGK Unmodified 1249.5422 0.54223854 4968 Q9UKJ3 GPATCH8 G patch domain-containing protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 12.951 13.166 2 0.00046698 12472 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 96.015 79.812 40673000 0 0 0 0 3080400 0 3062500 0 0 6106300 6252500 5198300 5927800 4860300 6184500 55818 4968 50159 469728;469729;469730;469731;469732;469733;469734;469735;469736;469737 372817;372818;372819;372820;372821;372822;372823;372824;372825;372826 372824 10 VGDSFYIR Unmodified 955.47633 0.47633123 616 O95049 TJP3 Tight junction protein ZO-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 52.918 52.954 2 0.020127 59775 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 63.054 40.432 85917000 0 0 0 6336400 5485600 14376000 6671500 4832800 3334300 10740000 14956000 0 13642000 5541300 0 55819 616 50160 469738;469739;469740;469741;469742;469743;469744;469745;469746;469747 372827;372828;372829;372830;372831;372832 372827 6 VGDSQNPLLSDGDLSTMIGK Oxidation (M) 2061.9888 0.98884955 2034 Q00403 GTF2B Transcription initiation factor IIB yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.845 77.903 2 2.6143E-123 89967 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 188.12 174.45 145590000 0 0 0 5820300 11325000 12688000 11634000 8789000 9948000 17600000 17625000 15336000 11728000 11139000 11955000 55820 2034 50161 469748;469749;469750;469751;469752;469753;469754;469755;469756;469757;469758;469759 372833;372834;372835;372836;372837;372838;372839;372840;372841;372842;372843;372844;372845 372835 3292 13 VGDSQNPLLSDGDLSTMIGK Unmodified 2045.9939 0.99393493 2034 Q00403 GTF2B Transcription initiation factor IIB yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 85.44 85.541 2 8.746E-54 98307 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 154.65 126.99 65573000 0 0 0 0 2761800 5070100 0 4593500 2446500 9292300 6086600 8486800 3865700 6099500 16870000 55821 2034 50161 469760;469761;469762;469763;469764;469765;469766;469767;469768;469769 372846;372847;372848;372849;372850;372851;372852;372853;372854;372855;372856 372853 11 VGDTLDLLIGEDK Unmodified 1386.7242 0.72422566 4796 Q9P0P8 C6orf203 Uncharacterized protein C6orf203 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 87.462 83.825 2 0.002089 104060 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.979 42.229 252520000 0 247120000 5400600 0 0 0 0 0 0 0 0 0 0 0 0 55822 4796 50162 469770;469771 372857 372857 1 VGDVQGQESESQLPTK Unmodified 1700.8217 0.82170787 3893 Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.375 36.555 2 1.6779E-35 39952 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 179.67 143.96 199600000 0 0 0 11369000 8222300 14762000 16034000 12223000 10000000 15928000 13780000 26931000 21247000 19792000 29309000 55823 3893 50163 469772;469773;469774;469775;469776;469777;469778;469779;469780;469781;469782;469783 372858;372859;372860;372861;372862;372863;372864;372865;372866;372867;372868;372869 372867 12 VGDVTPQVK Unmodified 941.5182 0.51819605 2289 Q13428 TCOF1 Treacle protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26.08 25.72 2 0.00034 32208 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 150.4 105.32 769070000 0 346340000 1770200 23873000 28242000 26888000 31900000 29112000 25261000 35148000 44205000 53188000 34895000 39920000 48325000 55824 2289 50164 469784;469785;469786;469787;469788;469789;469790;469791;469792;469793;469794;469795;469796;469797 372870;372871;372872;372873;372874;372875;372876;372877;372878;372879;372880;372881;372882;372883;372884;372885;372886;372887 372874 18 VGDVYIPR Unmodified 917.49707 0.49706667 2050 Q01130;Q9BRL6 SRSF2;SRSF8 Serine/arginine-rich splicing factor 2;Serine/arginine-rich splicing factor 8 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.273 49.432 2 0.0054586 54516 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 116.54 43.503 2968900000 0 0 0 194380000 183520000 164790000 207790000 256430000 166750000 258740000 309340000 371490000 289080000 215240000 351310000 55825 2050 50165 469798;469799;469800;469801;469802;469803;469804;469805;469806;469807;469808;469809 372888;372889;372890;372891;372892;372893;372894;372895;372896;372897;372898;372899;372900;372901;372902;372903;372904 372893 17 VGDVYIPRDR Unmodified 1188.6251 0.62512073 2050 Q01130 SRSF2 Serine/arginine-rich splicing factor 2 yes yes 0 0 1 By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching 10 0 7 1 1 1 1 1 1 1 39.517 39.499 3 0.001325 43805 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 98.943 81.575 114380000 0 0 0 13186000 10585000 11295000 17566000 13746000 17488000 0 30512000 0 0 0 0 55826 2050 50166 469810;469811;469812;469813;469814;469815;469816 372905;372906;372907 372907 3 VGDYGSLSGR Unmodified 1009.4829 0.48287317 4853 Q9UBR2 CTSZ Cathepsin Z yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 30.113 30.325 2 0.0015301 32945 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 105.52 85 134110000 0 0 0 0 10651000 0 11059000 11855000 6298800 10914000 19433000 0 10265000 18778000 34857000 55827 4853 50167 469817;469818;469819;469820;469821;469822;469823;469824;469825 372908;372909;372910;372911;372912;372913;372914;372915;372916;372917 372909 9 VGDYVYFENSSSNPYLVR Unmodified 2107.9851 0.9850848 583 O94776 MTA2 Metastasis-associated protein MTA2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 2 1 1 1 1 2 1 1 1 2 2 80.981 81.036 2;3 5.5935E-38 93396 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 131.13 124.69 121830000 0 0 0 2150800 6273500 8062100 2365200 7924000 5985300 24738000 10672000 13169000 5270100 8622400 26593000 55828 583 50168 469826;469827;469828;469829;469830;469831;469832;469833;469834;469835;469836;469837;469838;469839;469840;469841 372918;372919;372920;372921;372922;372923;372924;372925;372926;372927;372928;372929 372922 11 VGEAAHALGNTGHEIGR Unmodified 1687.839 0.83902969 45 CON__A3EZ82;Q6E0U4 DMKN Dermokine yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 32.668 32.846 3 0.000537 36482 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 63.614 54.817 + 42242000 0 0 0 10090000 3803300 4955000 0 0 0 0 5678500 10779000 0 0 6935600 55829 45 50169 469842;469843;469844;469845;469846;469847 372930;372931;372932;372933 372933 3 VGEAGLLSVDCSEAGPGALGLEAVSDSGTK Unmodified 2845.3651 0.36513239 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.43 2.72 4 2 1 1 4 1 1 90.464 86.652 2;3 1.7169E-225 107861 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 286.6 275.96 450490000 18040000 420080000 9821800 0 0 0 0 0 0 0 0 0 0 0 2552500 55830 487 50170 469848;469849;469850;469851;469852;469853;469854 372934;372935;372936;372937;372938;372939;372940;372941;372942 372934 9 VGEAIETTQR Unmodified 1102.5619 0.56185177 2987 Q6VN20 RANBP10 Ran-binding protein 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 22.466 22.689 2 0.0011859 23195 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 108.98 81.674 31835000 0 0 0 2756300 0 2737900 2103700 0 1128500 0 7200000 0 4276100 5920300 5712600 55831 2987 50171 469855;469856;469857;469858;469859;469860;469861;469862;469863;469864;469865 372943;372944;372945;372946;372947;372948;372949;372950;372951;372952;372953 372947 11 VGEAPGLQQPQPR Unmodified 1375.7208 0.72081203 1462 P42684 ABL2 Abelson tyrosine-protein kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 37.924 38.012 2 3.4242E-08 42226 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 106.2 82.475 295630000 0 0 0 22347000 27191000 26512000 30180000 34479000 23179000 34126000 47477000 50142000 0 0 0 55832 1462 50172 469866;469867;469868;469869;469870;469871;469872;469873;469874 372954;372955;372956;372957;372958;372959;372960 372955 5 VGEATETALTCLVEK Unmodified 1619.8076 0.80763771 1041 P16615;Q93084 ATP2A2;ATP2A3 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 77.285 77.085 2 2.9417E-41 89054 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 159.99 138.62 174130000 0 9950000 0 6039000 9886700 9448500 9663600 15692000 11668000 16377000 17408000 20962000 13976000 15651000 17414000 55833 1041 50173 469875;469876;469877;469878;469879;469880;469881;469882;469883;469884;469885;469886;469887 372961;372962;372963;372964;372965;372966;372967;372968;372969;372970;372971;372972;372973;372974 372962 14 VGECEASAMLPLECQYLNK Unmodified 2211.001 0.001010917 4381 Q9H3P2 NELFA Negative elongation factor A yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 85.095 82.786 3 0.00010353 102307 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.949 47.494 138590000 0 122800000 0 0 0 0 0 0 0 0 0 0 0 0 15786000 55834 4381 50174 469888;469889 372975;372976 372975 2 VGECPHEMAAMK Oxidation (M) 1374.573 0.57302686 5356 yes yes 0 1 0 By MS/MS 10 0 2 2 11.485 11.868 2 0.0052914 10078 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.418 23.844 + 8447100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8447100 55835 5356 50175 469890;469891 372977;372978 372977 6740 1 VGECPHEMAAMKK Unmodified 1486.6731 0.67307526 5356 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 2 1 1 1 1 1 1 1 1 1 53.66 53.794 3 0.028275 60488 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 20.463 7.6954 + 698570000 0 0 0 104740000 29969000 80012000 47064000 71016000 38283000 66110000 51265000 57714000 65520000 43458000 43429000 55836 5356 50176 469892;469893;469894;469895;469896;469897;469898;469899;469900;469901;469902;469903;469904 372979 372979 1 VGEEDDGEYR Unmodified 1167.468 0.46801097 1315 P32004 L1CAM Neural cell adhesion molecule L1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 15.444 15.712 2 0.0025569 14327 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 95.502 88.281 20199000 0 0 0 0 0 1933700 0 0 1166000 0 4885900 4093900 3340200 4779100 0 55837 1315 50177 469905;469906;469907;469908;469909;469910;469911;469912 372980;372981;372982;372983;372984;372985;372986 372984 7 VGEEEHVYSFPNK Unmodified 1533.71 0.70997257 1558 P49023 PXN Paxillin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 1 1 1 2 1 1 2 45.199 45.451 2;3 0.0061669 50852 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 43.761 29.731 231850000 0 0 0 6980900 8217200 10309000 10193000 11089000 8868200 21572000 34189000 26239000 15964000 22550000 55683000 55838 1558 50178 469913;469914;469915;469916;469917;469918;469919;469920;469921;469922;469923;469924;469925;469926 372987;372988;372989;372990;372991;372992;372993 372991 5 VGEEFEEQTVDGRPCK Unmodified 1878.8418 0.84179138 1247 P29373 CRABP2 Cellular retinoic acid-binding protein 2 yes yes 0 0 1 By MS/MS 10 0 1 1 42.796 42.267 3 7.1683E-08 47707 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 88.561 83.56 45525000 0 0 0 45525000 0 0 0 0 0 0 0 0 0 0 0 55839 1247 50179 469927 372994 372994 1 VGEFCHNR Unmodified 1017.445 0.44504788 1137 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.372 11.518 2 0.0050366 9319 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 114.78 79.975 101580000 0 0 0 3476600 2259800 4930500 3737300 0 4114000 7306700 10556000 12066000 9346000 13570000 30215000 55840 1137 50180 469928;469929;469930;469931;469932;469933;469934;469935;469936;469937;469938 372995;372996;372997;372998;372999;373000;373001;373002 373000 7 VGEFSGANK Unmodified 907.43995 0.43994572 923 P10599 TXN Thioredoxin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.87 3.89 1 12 2 23 4 6 5 2 2 2 2 2 1 2 2 2 2 2 2 19.626 18.881 1;2 3.1556E-117 15116 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 241.3 174.5 23380000000 1390100000 16492000000 323280000 421680000 120490000 127490000 175850000 156640000 130440000 221830000 650710000 748770000 298980000 664420000 1457500000 55841 923 50181 469939;469940;469941;469942;469943;469944;469945;469946;469947;469948;469949;469950;469951;469952;469953;469954;469955;469956;469957;469958;469959;469960;469961;469962;469963;469964;469965;469966;469967;469968;469969;469970;469971;469972;469973;469974;469975;469976 373003;373004;373005;373006;373007;373008;373009;373010;373011;373012;373013;373014;373015;373016;373017;373018;373019;373020;373021;373022;373023;373024;373025;373026;373027;373028;373029;373030;373031;373032;373033;373034;373035;373036;373037;373038;373039;373040;373041;373042;373043;373044;373045 373016 37 VGEGATFDPFGAPSK Unmodified 1478.7042 0.70415892 452 O75061 DNAJC6 Putative tyrosine-protein phosphatase auxilin yes yes 0 0 0 By MS/MS By MS/MS By matching By matching 10 0 4 1 1 1 1 74.483 74.625 2 0.0013175 86482 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 55.04 45.683 24249000 0 0 0 0 0 4605000 0 0 0 0 0 0 6141900 5462700 8039700 55842 452 50182 469977;469978;469979;469980 373046;373047 373047 2 VGEGPGVCWLAPEQTAGK Unmodified 1854.8934 0.89343302 4394 Q9H4A4 RNPEP Aminopeptidase B yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 76.467 76.674 2 1.6221E-32 88017 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 147.33 115.07 23287000 0 0 0 0 0 0 0 0 0 0 0 0 0 5402400 17885000 55843 4394 50183 469981;469982 373048;373049 373048 2 VGEIEFEGLMR Oxidation (M) 1294.6227 0.62273747 4874 Q9UEY8 ADD3 Gamma-adducin yes yes 0 1 0 By matching By MS/MS By matching By matching By MS/MS By matching 10 0 6 1 1 1 1 1 1 71.719 71.616 2 0.0025586 82924 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 62.823 52.299 31549000 0 0 0 4704500 3585500 5172900 0 0 4728300 0 0 0 7095200 6262200 0 55844 4874 50184 469983;469984;469985;469986;469987;469988 373050;373051 373050 6224 2 VGEIFSAAGAAFTK Unmodified 1367.7085 0.70851601 3263 Q8IXM2 BAP18 Chromatin complexes subunit BAP18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.64 2.9 1 1 9 1 1 1 1 1 1 1 1 1 1 1 79.811 79.336 2 0.00039299 94887 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 96.64 75.112 127400000 0 9406600 4070000 0 0 14308000 6239500 0 8245800 16118000 16827000 27603000 14304000 10279000 0 55845 3263 50185 469989;469990;469991;469992;469993;469994;469995;469996;469997;469998;469999 373052;373053;373054;373055;373056;373057;373058;373059 373054 8 VGEIHVK Unmodified 780.44939 0.4493882 464 O75152;A0A1B0GTU1 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15.951 15.574 2 0.028147 15150 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 76.847 21.406 124320000 2823100 0 23963000 3657700 3693700 3447900 6363300 5587100 4491800 7046900 13613000 11957000 13883000 11045000 12747000 55846 464 50186 470000;470001;470002;470003;470004;470005;470006;470007;470008;470009;470010;470011;470012;470013 373060;373061;373062;373063;373064;373065;373066 373065 7 VGELCAGK Unmodified 832.41129 0.41128813 1073 P18206 VCL Vinculin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.24 3.75 5 1 11 2 2 2 1 1 1 1 1 1 1 1 1 1 1 16.558 15.42 2 0.0075172 14481 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 89.369 20.454 1944700000 73175000 1656100000 16087000 16497000 6203200 19949000 12439000 9356600 8422900 18997000 33537000 23930000 16345000 33654000 0 55847 1073 50187 470014;470015;470016;470017;470018;470019;470020;470021;470022;470023;470024;470025;470026;470027;470028;470029;470030 373067;373068;373069;373070;373071;373072;373073;373074;373075 373073 8 VGELKDDDFEK Unmodified 1293.6089 0.60886155 2079 Q02750 MAP2K1 Dual specificity mitogen-activated protein kinase kinase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.65 2.94 3 1 19 1 2 1 2 2 1 2 2 1 1 2 2 1 2 1 35.762 35.03 2;3 0.002205 38837 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 55.452 44.239 405710000 38277000 91574000 2534000 24646000 15823000 13670000 27519000 16760000 8830800 25817000 41172000 48265000 18206000 24439000 8176500 55848 2079 50188 470031;470032;470033;470034;470035;470036;470037;470038;470039;470040;470041;470042;470043;470044;470045;470046;470047;470048;470049;470050;470051;470052;470053 373076;373077;373078;373079;373080;373081;373082;373083;373084;373085;373086;373087;373088;373089;373090;373091 373076 15 VGELKDDDFER Unmodified 1321.615 0.61500956 1373 P36507 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 yes yes 0 0 1 By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.197 37.377 3 0.0062589 41320 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 69.451 46.976 200910000 0 0 0 11950000 13609000 9346900 20099000 11128000 5451500 25458000 21689000 26010000 23919000 13630000 18619000 55849 1373 50189 470054;470055;470056;470057;470058;470059;470060;470061;470062;470063;470064;470065 373092;373093;373094;373095;373096;373097;373098 373092 2 VGENVLPPK Unmodified 951.53893 0.53893149 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.117 38.155 2 0.0095702 42493 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.351 38.133 63812000 0 0 0 4338200 5850800 7085800 6658300 7372700 6295900 8370200 10501000 0 0 7339900 0 55850 5216 50190 470066;470067;470068;470069;470070;470071;470072;470073;470074;470075;470076;470077 373099;373100;373101;373102;373103;373104;373105;373106;373107;373108;373109;373110;373111;373112;373113;373114 373099 16 VGENVSDVAPTQPR Unmodified 1467.7318 0.73177065 3977 Q96RT7 TUBGCP6 Gamma-tubulin complex component 6 yes yes 0 0 0 By MS/MS 10 0 1 1 41.345 40.852 2 0.0029383 45994 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 62.408 56.167 1769500 0 0 0 0 1769500 0 0 0 0 0 0 0 0 0 0 55851 3977 50191 470078 373115 373115 1 VGENVSDVAPTRPR Unmodified 1495.7743 0.77430417 3977 Q96RT7 TUBGCP6 Gamma-tubulin complex component 6 yes no 0 0 1 By matching By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 34.635 35.163 3 0.014528 37659 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 35.037 3.809 62864000 0 0 0 0 0 0 0 0 0 0 0 12056000 20846000 19352000 10610000 55852 3977 50192 470079;470080;470081;470082 373116;373117 373116 2 VGEPVALSEEER Unmodified 1313.6463 0.64630969 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 45.884 46.038 2 0.00024706 52016 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 92.611 68.389 1370700000 0 0 0 90315000 148660000 106560000 161430000 93810000 107610000 94442000 144800000 155910000 0 150850000 116260000 55853 2290 50193 470083;470084;470085;470086;470087;470088;470089;470090;470091;470092;470093 373118;373119;373120;373121;373122;373123;373124;373125;373126;373127 373127 9 VGEPVALSEEERLK Unmodified 1554.8253 0.82533668 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 54.42 54.552 2;3 3.1301E-25 61650 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 193.22 157.6 2851300000 0 0 0 150920000 138180000 165380000 198660000 227680000 141970000 306370000 232350000 390470000 294690000 211050000 393570000 55854 2290 50194 470094;470095;470096;470097;470098;470099;470100;470101;470102;470103;470104;470105;470106;470107;470108;470109;470110;470111;470112;470113;470114;470115;470116;470117 373128;373129;373130;373131;373132;373133;373134;373135;373136;373137;373138;373139;373140;373141;373142;373143;373144;373145;373146;373147;373148;373149;373150;373151;373152;373153;373154;373155;373156 373131 25 VGEQPTLQLK Unmodified 1111.6237 0.62372375 4767 Q9NZH8 IL36G Interleukin-36 gamma yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 48.791 48.893 2 0.008621 55154 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 59.597 27.836 138150000 0 0 0 46669000 6133000 7737500 5203000 10277000 0 8211400 9632200 24616000 13746000 5922700 0 55855 4767 50195 470118;470119;470120;470121;470122;470123;470124;470125;470126;470127 373157;373158;373159;373160;373161;373162 373158 6 VGERQPLLGPPESMR Unmodified 1664.8668 0.86682434 4033 Q99613;B5ME19 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 56.431 56.839 3 0.01481 63684 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 30.536 26.766 19540000 0 0 0 0 0 0 0 0 0 0 0 0 0 6743700 12796000 55856 4033 50196 470128;470129 373163 373163 1 VGESSEQVSEEK Unmodified 1306.5889 0.58885439 1389 P37275 ZEB1 Zinc finger E-box-binding homeobox 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.606 13.768 2 3.7128E-09 12520 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 142.83 115.57 67666000 0 0 0 3794700 3076300 3752000 4046300 3419700 2981500 5509000 6046400 7709400 7908500 5932300 13490000 55857 1389 50197 470130;470131;470132;470133;470134;470135;470136;470137;470138;470139;470140;470141 373164;373165;373166;373167;373168;373169;373170;373171;373172;373173;373174 373167 11 VGETETRLECLLNNNK Unmodified 1888.9313 0.93127509 1864 P61962 DCAF7 DDB1- and CUL4-associated factor 7 yes yes 0 0 1 By MS/MS 10 0 1 1 68.914 69.4 3 0.00070697 79090 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.812 44.082 7531600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7531600 55858 1864 50198 470142 373175 373175 1 VGETFHASQPSLTVDGFTDPSNSER Unmodified 2677.2256 0.22560244 2579 Q15796 SMAD2 Mothers against decapentaplegic homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.342 75.401 3 2.7118E-27 87018 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 86.856 79.41 215380000 0 0 0 4357700 11482000 19685000 14557000 16289000 14776000 24087000 20482000 27309000 11660000 17075000 33618000 55859 2579 50199 470143;470144;470145;470146;470147;470148;470149;470150;470151;470152;470153;470154 373176;373177;373178;373179;373180;373181;373182;373183;373184;373185;373186;373187;373188;373189 373187 14 VGETIIDLENR Unmodified 1257.6565 0.65648044 4773 Q9NZM1 MYOF Myoferlin yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 68.364 68.189 2 0.002981 78667 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 77.662 58.684 6074700 0 0 0 0 3730400 0 2344300 0 0 0 0 0 0 0 0 55860 4773 50200 470155;470156 373190;373191 373191 2 VGEVCHITCK Unmodified 1201.5584 0.55836308 2080 Q02790 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 1 3 2 25.505 21.544 2;3 0.0051434 28783 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 56.548 43.932 174310000 15437000 119780000 39090000 0 0 0 0 0 0 0 0 0 0 0 0 55861 2080 50201 470157;470158;470159;470160;470161;470162 373192;373193;373194;373195;373196 373193 4 VGEVCHITCKPEYAYGSAGSPPK Unmodified 2506.1621 0.16207966 2080 Q02790 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.6 3.9 11 2 17 6 3 4 1 2 2 2 2 2 2 2 2 51.087 48.64 2;3;4 4.2858E-261 64097 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 252.6 249.04 3646400000 2498300000 222270000 663850000 9866100 0 17259000 0 0 19917000 12756000 50746000 40379000 32288000 41320000 37418000 55862 2080 50202 470163;470164;470165;470166;470167;470168;470169;470170;470171;470172;470173;470174;470175;470176;470177;470178;470179;470180;470181;470182;470183;470184;470185;470186;470187;470188;470189;470190;470191;470192 373197;373198;373199;373200;373201;373202;373203;373204;373205;373206;373207;373208;373209;373210;373211;373212;373213;373214;373215;373216;373217;373218;373219;373220;373221;373222;373223;373224;373225;373226;373227;373228;373229 373201 32 VGEVIVTK Unmodified 843.50657 0.50656873 930 P10809 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.48 1 3 1 15 2 2 1 2 1 2 1 2 1 1 1 1 1 1 1 35.679 35.095 2 0.0054175 34065 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 116.37 67.81 6640200000 162530000 3094500000 109090000 216050000 189800000 294080000 286030000 231930000 190690000 296210000 322450000 356410000 278570000 220350000 391460000 55863 930 50203 470193;470194;470195;470196;470197;470198;470199;470200;470201;470202;470203;470204;470205;470206;470207;470208;470209;470210;470211;470212 373230;373231;373232;373233;373234;373235;373236;373237;373238;373239;373240;373241;373242;373243;373244;373245;373246;373247;373248;373249 373231 18 VGEVTYVELLMDAEGK Oxidation (M) 1767.8601 0.86006721 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.19 3.31 5 1 20 1 3 2 1 2 2 2 2 2 2 2 2 1 1 1 89.719 88.781 2 3.9979E-58 110291 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 173.76 139 260420000 5812600 83299000 10372000 1715900 9747300 10459000 7479500 14866000 11357000 33874000 26791000 20226000 3128700 7271700 14021000 55864 1681 50204 470213;470214;470215;470216;470217;470218;470219;470220;470221;470222;470223;470224;470225;470226;470227;470228;470229;470230;470231;470232;470233;470234;470235;470236;470237;470238 373250;373251;373252;373253;373254;373255;373256;373257;373258;373259;373260;373261;373262;373263;373264;373265;373266 373254 2727 16 VGEVTYVELLMDAEGK Unmodified 1751.8652 0.86515259 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.38 0.484 5 3 3 3 2 96.419 92.304 2;3 2.8691E-41 115606 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 146.5 130.75 125750000 50310000 70870000 4570500 0 0 0 0 0 0 0 0 0 0 0 0 55865 1681 50204 470239;470240;470241;470242;470243;470244;470245;470246 373267;373268;373269;373270;373271;373272;373273 373272 6 VGFALDLPPR Unmodified 1083.6077 0.60767975 5123 Q9Y2W2 WBP11 WW domain-binding protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 1 1 2 81.32 81.392 2 0.0029838 94039 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.149 65.152 112350000 0 0 0 2654400 5578900 7789200 6082300 7289400 7415500 14822000 8380800 12370000 7189000 8802900 23976000 55866 5123 50205 470247;470248;470249;470250;470251;470252;470253;470254;470255;470256;470257;470258;470259 373274;373275;373276;373277;373278;373279;373280;373281;373282;373283;373284;373285;373286;373287;373288;373289;373290;373291;373292;373293;373294 373280 20 VGFEVEK Unmodified 806.41742 0.41741937 4831 Q9UBB4 ATXN10 Ataxin-10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 37.512 36.906 2 0.024937 40831 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 81.784 35.413 1199400000 0 586980000 29864000 24484000 27605000 80595000 38859000 35292000 33929000 106270000 0 71475000 0 56790000 107230000 55867 4831 50206 470260;470261;470262;470263;470264;470265;470266;470267;470268;470269;470270;470271 373295;373296;373297 373297 3 VGFKGFQIAAEK Unmodified 1293.7081 0.70812208 1535 P48200 IREB2 Iron-responsive element-binding protein 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 43.929 37.922 3 0.016611 52104 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.568 12.265 29841000 13186000 16655000 0 0 0 0 0 0 0 0 0 0 0 0 0 55868 1535 50207 470272;470273 373298;373299 373299 2 VGFLPSAGK Unmodified 874.49125 0.49125301 987 P13798 APEH Acylamino-acid-releasing enzyme yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 54.448 53.297 2 0.0040136 60250 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 98.629 64.938 645760000 415790000 0 69116000 26597000 0 0 0 0 6428100 0 25293000 22184000 16055000 20455000 43842000 55869 987 50208 470274;470275;470276;470277;470278;470279;470280;470281;470282;470283 373300;373301;373302;373303;373304;373305;373306;373307;373308;373309;373310;373311;373312;373313 373305 14 VGFQNIAPK Unmodified 972.53927 0.53926584 2852 Q68CP9 ARID2 AT-rich interactive domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 50.618 50.833 2 0.0078586 56502 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 71.296 46.297 19796000 0 0 0 0 0 0 0 0 0 0 0 0 0 19796000 0 55870 2852 50209 470284;470285 373314;373315 373315 2 VGFYDIER Unmodified 997.4869 0.48689592 1 A0A0B4J2F2;P57059 LOC102724428;SIK1 Serine/threonine-protein kinase SIK1 yes no 0 0 0 By MS/MS 10 0 1 1 61.15 61.344 2 0.041222 69175 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 50.04 27.021 2802900 0 0 0 0 0 0 0 0 0 0 0 0 0 2802900 0 55871 1 50210 470286 373316 373316 1 VGGAFAPPLK Unmodified 955.5491 0.54910224 2670 Q3L8U1 CHD9 Chromodomain-helicase-DNA-binding protein 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.87 3 5 1 1 1 1 1 1 1 1 59.813 57.58 2 0.03427 65372 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 41.84 26.208 43447000 12005000 10733000 1444900 3287600 0 5418500 0 3724500 3258800 0 3574700 0 0 0 0 55872 2670 50211 470287;470288;470289;470290;470291;470292;470293;470294 373317;373318;373319;373320;373321 373320 5 VGGGEYIELK Unmodified 1063.555 0.55497548 3603 Q8WZ42 TTN Titin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 1 4 2 63.745 58.288 2 0.016673 65189 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.032 41.295 1249700000 13244000 1226300000 10151000 0 0 0 0 0 0 0 0 0 0 0 0 55873 3603 50212 470295;470296;470297;470298;470299;470300;470301 373322;373323;373324;373325;373326;373327 373322 6 VGGGGTAGGDR Unmodified 902.42061 0.42060727 547 O75822 EIF3J Eukaryotic translation initiation factor 3 subunit J yes yes 0 0 0 By matching By MS/MS By matching By matching By matching By MS/MS By matching 10 0 8 1 2 1 1 1 1 1 16.652 16.83 1;2 1.8771E-15 16329 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 153.08 111.43 10660000 0 0 0 418740 0 2929500 0 0 994620 1417000 1729500 2161600 0 1008700 0 55874 547 50213 470302;470303;470304;470305;470306;470307;470308;470309 373328;373329 373329 1 VGGGGTAGGDRWEGEDEDEDVK Unmodified 2233.936 0.93596236 547 O75822 EIF3J Eukaryotic translation initiation factor 3 subunit J yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 37.167 36.06 2;3 5.2609E-43 38907 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 108.18 104.46 351590000 64473000 48447000 6456800 6692300 7028400 18792000 7128000 12365000 8010300 19655000 31715000 34750000 15194000 21277000 49609000 55875 547 50214 470310;470311;470312;470313;470314;470315;470316;470317;470318;470319;470320;470321;470322;470323;470324;470325;470326 373330;373331;373332;373333;373334;373335;373336;373337;373338;373339;373340;373341;373342;373343;373344;373345;373346;373347;373348 373334 19 VGGGGVGGGLLENANPLIYQR Unmodified 2040.0752 0.075237214 5160 Q9Y3D0 FAM96B Mitotic spindle-associated MMXD complex subunit MIP18 yes yes 0 0 0 By MS/MS 10 0 1 1 84.681 84.818 2 0.0002828 98462 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 47.189 32.931 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55876 5160 50215 470327 373349 373349 1 VGGHAAEYGAEALER Unmodified 1528.727 0.72701962 55 CON__P01966 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 3 1 2 1 2 3 2 2 2 2 40.878 41.132 2;3 2.1862E-27 45337 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 106.42 21.664 + 360130000 0 0 0 0 19160000 44518000 18438000 38923000 18480000 33751000 37920000 52161000 29812000 31286000 35677000 55877 55 50216 470328;470329;470330;470331;470332;470333;470334;470335;470336;470337;470338;470339;470340;470341;470342;470343;470344;470345;470346;470347;470348;470349 373350;373351;373352;373353;373354;373355;373356;373357;373358;373359;373360;373361;373362;373363;373364;373365 373363 13 VGGIYTVLQTK Unmodified 1177.6707 0.67067394 989 P13807 GYS1 Glycogen [starch] synthase, muscle yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 71.986 70.548 2 5.2805E-05 91615 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 113.62 0 98113000 44946000 23360000 3616600 966950 0 2876600 2198600 2329500 2687300 0 4478100 4418100 3524000 2710700 0 55878 989 50217 470350;470351;470352;470353;470354;470355;470356;470357;470358;470359;470360;470361;470362 373366;373367;373368;373369;373370 373368 5 VGGLEDQLSVR Unmodified 1171.6197 0.619701 503 O75462 CRLF1 Cytokine receptor-like factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 56.198 56.518 2 0.00025931 64079 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 91.584 51.232 65042000 0 0 0 0 0 11453000 0 0 0 8783500 11661000 6986900 10292000 5202200 10664000 55879 503 50218 470363;470364;470365;470366;470367;470368;470369;470370;470371 373371;373372;373373;373374;373375;373376;373377;373378;373379;373380;373381;373382 373377 12 VGGLGVNLTGANR Unmodified 1226.6731 0.67313356 2097 Q03468 ERCC6 DNA excision repair protein ERCC-6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 58.851 59.053 2 9.6633E-06 67530 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 93.556 57.109 20587000 0 0 0 0 0 0 0 0 0 0 0 0 20587000 0 0 55880 2097 50219 470372;470373;470374;470375;470376 373383;373384;373385;373386;373387;373388 373383 6 VGGLLAFAK Unmodified 874.52764 0.52763852 1234 P28340 POLD1 DNA polymerase delta catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 75.424 74.296 2 0.014504 85096 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 58.194 34.222 506600000 67786000 28816000 7704200 22190000 23422000 39652000 25966000 27987000 27259000 32458000 34397000 46750000 37540000 34558000 50118000 55881 1234 50220 470377;470378;470379;470380;470381;470382;470383;470384;470385;470386;470387;470388;470389;470390;470391;470392 373389;373390;373391;373392;373393;373394;373395;373396;373397;373398;373399;373400 373395 12 VGGMHETVLTVTGK Unmodified 1427.7442 0.74424959 659 O95425 SVIL Supervillin yes yes 0 0 0 By MS/MS 2 0 1 1 59.512 51.286 3 0.0013377 69769 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.092 36.701 7846500 7846500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55882 659 50221 470393 373401 373401 1 VGGNEVTELSTGSSGHDSSLFEDK Unmodified 2451.1038 0.10375597 4552 Q9NPI1 BRD7 Bromodomain-containing protein 7 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 2 1 1 1 67.255 66.628 3 1.4581E-27 75923 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 109.75 107.65 129010000 187020 55040000 240470 2589600 3361100 9612800 5048400 3974800 6733800 7109600 7862200 0 9475900 5595600 12183000 55883 4552 50222 470394;470395;470396;470397;470398;470399;470400;470401;470402;470403;470404;470405;470406;470407;470408;470409 373402;373403;373404;373405;373406;373407;373408;373409;373410;373411;373412 373406 11 VGGNIEVLGFNAR Unmodified 1344.715 0.71499837 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.93 76.991 2 5.828E-08 88655 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 123.79 111 222150000 0 0 0 9480400 10852000 16380000 17176000 14785000 16160000 22654000 20227000 29505000 16034000 21162000 27739000 55884 2451 50223 470410;470411;470412;470413;470414;470415;470416;470417;470418;470419;470420;470421 373413;373414;373415;373416;373417;373418;373419;373420;373421;373422;373423;373424 373415 12 VGGNIEVLGFNTR Unmodified 1374.7256 0.72556306 2201 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.926 76.988 2 0.0025095 89003 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 73.499 45.295 61371000 0 0 0 2909700 3181200 4071700 4658900 3543400 3807100 6000500 6257300 6977500 5280100 7319100 7364400 55885 2201 50224 470422;470423;470424;470425;470426;470427;470428;470429;470430;470431;470432;470433 373425;373426;373427;373428;373429;373430;373431 373431 6 VGGRLEDTK Unmodified 973.51926 0.51925868 1548 P48643 CCT5 T-complex protein 1 subunit epsilon yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.18 3.29 3 1 13 1 2 1 1 1 1 1 1 1 1 2 1 1 1 1 9.3298 8.681 2 4.2006E-05 7455 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 164.53 94.266 2937700000 1682000000 439460000 397870000 11482000 16277000 19584000 21400000 8449000 12871000 31810000 73752000 73162000 15533000 29965000 104080000 55886 1548 50225 470434;470435;470436;470437;470438;470439;470440;470441;470442;470443;470444;470445;470446;470447;470448;470449;470450 373432;373433;373434;373435;373436;373437;373438;373439;373440;373441;373442 373432 2 VGGSGVNVNAK Unmodified 1000.5302 0.53015772 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17.151 16.712 2 2.2731E-12 20641 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 156.18 34.661 591140000 13937000 98767000 0 16823000 24792000 25612000 36637000 34641000 29222000 33964000 46164000 66510000 55507000 48407000 60153000 55887 2172 50226 470451;470452;470453;470454;470455;470456;470457;470458;470459;470460;470461;470462;470463;470464 373443;373444;373445;373446;373447;373448;373449;373450;373451;373452;373453;373454;373455;373456;373457;373458;373459;373460 373447 18 VGGSQPPFQGQR Unmodified 1256.6262 0.62618337 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.507 29.699 2 2.54E-05 31137 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 132.76 113.78 108520000 0 0 0 7572400 5928200 6343700 7191700 7220600 5910500 8816000 9541200 14893000 12073000 8972500 14054000 55888 4139 50227 470465;470466;470467;470468;470469;470470;470471;470472;470473;470474;470475;470476 373461;373462;373463;373464;373465;373466;373467;373468;373469;373470;373471;373472;373473 373465 12 VGGSSVDLHR Unmodified 1025.5254 0.52540669 426 O60716 CTNND1 Catenin delta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.47 19.669 2 0.0035453 19800 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.1 54.14 79469000 0 0 0 4432500 4263800 6763400 5286400 4830700 3594900 9100700 8074600 8203200 7675700 6480400 10762000 55889 426 50228 470477;470478;470479;470480;470481;470482;470483;470484;470485;470486;470487;470488 373474;373475;373476;373477;373478;373479;373480;373481;373482;373483 373481 9 VGGTKPAGGDFGEVLNSAANASATTTEPLPEK Unmodified 3085.5204 0.52038748 1768 P55327 TPD52 Tumor protein D52 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 78.275 78.391 3 7.8227E-156 90641 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 165 159.68 184740000 0 0 0 0 13814000 0 7956700 18029000 5222700 32149000 25616000 37794000 7445100 10732000 25976000 55890 1768 50229 470489;470490;470491;470492;470493;470494;470495;470496;470497;470498 373484;373485;373486;373487;373488;373489;373490;373491;373492;373493;373494;373495 373490 12 VGGTNLGAPGAFGQSPFSQPPAPPHQNTFPPR Unmodified 3227.5901 0.59007922 3873 Q96I24 FUBP3 Far upstream element-binding protein 3 yes yes 0 0 0 By MS/MS 10 0 1 1 81.589 81.804 3 2.7117E-08 94333 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.66 33.522 10996000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10996000 55891 3873 50230 470499 373496 373496 1 VGGTNPNGGSFEEVLSSTAHASAQSLAGGSR Unmodified 2944.3911 0.39110464 2642 Q16890 TPD52L1 Tumor protein D53 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 82.39 82.538 3 2.4727E-15 95469 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 50.234 38.923 15830000 0 0 0 0 0 0 0 0 0 10484000 5346300 0 0 0 0 55892 2642 50231 470500;470501 373497;373498 373497 2 VGGTSDVEVNEK Unmodified 1232.5885 0.58846046 930 P10809 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.33 3.04 1 3 1 1 1 3 1 1 37.52 35.082 2 9.7181E-45 27769 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 204.52 168.13 831090000 39094000 198930000 4019400 0 0 0 0 0 0 0 0 0 0 0 589050000 55893 930 50232 470502;470503;470504;470505;470506;470507 373499;373500;373501;373502;373503;373504;373505;373506;373507 373504 7 VGGTSDVEVNEKK Unmodified 1360.6834 0.68342347 930 P10809 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 15.257 15.414 3 1.5161E-09 14924 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 91.62 77.941 232190000 0 0 0 16721000 7961600 0 22450000 15791000 9355400 0 0 43746000 41387000 43959000 30816000 55894 930 50233 470508;470509;470510;470511;470512;470513;470514;470515;470516 373508;373509;373510;373511 373509 3 VGGVGVPAAPSITAVTVNK Unmodified 1735.9832 0.98323431 98 CON__Q6ISB0;CON__Q9NSB2;Q9NSB2 KRT84 Keratin, type II cuticular Hb4 yes no 0 0 0 By MS/MS 10 0 1 1 77.69 77.878 2 5.5336E-06 89852 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 71.176 65.96 + 12543000 0 0 0 0 0 0 0 12543000 0 0 0 0 0 0 0 55895 98 50234 470517 373512 373512 1 VGGVQSLGGTGALR Unmodified 1270.6993 0.69934831 1049 P17174 GOT1 Aspartate aminotransferase, cytoplasmic yes yes 0 0 0 By MS/MS 10 0 1 1 51.113 51.809 2 0.0015563 57697 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.293 30.404 7965600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7965600 55896 1049 50235 470518 373513 373513 1 VGHIGNLK Unmodified 836.48684 0.48683634 3970 Q96RL7 VPS13A Vacuolar protein sorting-associated protein 13A yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 24.854 20.784 2 0.03206 26949 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 74.517 33.596 73582000 24949000 0 48633000 0 0 0 0 0 0 0 0 0 0 0 0 55897 3970 50236 470519;470520 373514 373514 1 VGHSELVGEIIR Unmodified 1307.7197 0.7197494 1398 P38606 ATP6V1A V-type proton ATPase catalytic subunit A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 2 1 1 1 1 1 1 1 2 1 61.035 61.183 2;3 0.00034009 69819 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 61.435 37.686 117830000 0 0 0 3693900 0 20298000 4574400 5561900 3306600 8362400 8157200 10290000 6068400 10374000 37143000 55898 1398 50237 470521;470522;470523;470524;470525;470526;470527;470528;470529;470530;470531;470532;470533 373515;373516;373517;373518;373519;373520;373521;373522;373523;373524;373525 373515 10 VGHVGPLQIGQAVK Unmodified 1401.8092 0.80923311 2229 Q13049 TRIM32 E3 ubiquitin-protein ligase TRIM32 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.4 3.2 1 4 1 1 1 1 1 60.696 59.038 3 0.0002483 82450 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.205 46.668 39488000 18594000 0 0 0 3117800 0 4237800 0 0 0 0 0 5271100 8267500 0 55899 2229 50238 470534;470535;470536;470537;470538 373526;373527;373528 373527 1 VGIADGHR Unmodified 823.43005 0.43004974 2064 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 9.9396 10.1 2 0.030197 7167 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 55.676 40.237 165170000 0 0 0 0 7963400 10423000 9589000 9296300 5297700 14879000 27547000 26147000 16763000 9486800 27778000 55900 2064 50239 470539;470540;470541;470542;470543;470544;470545;470546;470547;470548;470549 373529;373530;373531;373532 373531 2 VGIDTPDIDIHGPEGK Unmodified 1661.8261 0.82606496 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.61 2.99 4 1 23 2 2 1 1 2 2 2 2 2 2 2 2 2 2 2 69.733 69.064 2;3 1.1714E-38 87430 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.544 82.184 839080000 37123000 367480000 7925200 22932000 18830000 26665000 25154000 40617000 29832000 29083000 26222000 56851000 38192000 42579000 69590000 55901 2172 50240 470550;470551;470552;470553;470554;470555;470556;470557;470558;470559;470560;470561;470562;470563;470564;470565;470566;470567;470568;470569;470570;470571;470572;470573;470574;470575;470576;470577 373533;373534;373535;373536;373537;373538;373539;373540;373541;373542;373543;373544;373545;373546;373547;373548;373549;373550;373551;373552;373553;373554;373555 373537 19 VGIENFELLK Unmodified 1160.6441 0.64412484 520 O75582 RPS6KA5 Ribosomal protein S6 kinase alpha-5 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 87.276 83.639 2 0.0020908 104122 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.69 32.504 35834000 0 31732000 4102100 0 0 0 0 0 0 0 0 0 0 0 0 55902 520 50241 470578;470579 373556 373556 1 VGIFTGAR Unmodified 819.46029 0.46028724 861 P08237 PFKM ATP-dependent 6-phosphofructokinase, muscle type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 13 1 1 1 2 1 1 1 1 1 1 1 1 45.242 45.403 2 0.0068497 50362 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 94.006 40.297 628300000 0 0 0 22530000 44536000 33532000 42913000 64579000 22251000 57056000 71199000 69899000 48597000 63751000 87453000 55903 861 50242 470580;470581;470582;470583;470584;470585;470586;470587;470588;470589;470590;470591;470592 373557;373558;373559;373560;373561;373562;373563;373564;373565;373566;373567 373562 3 VGIGAFPTEQDNEIGELLQTR Unmodified 2286.1492 0.14919002 1283 P30520 ADSS Adenylosuccinate synthetase isozyme 2 yes yes 0 0 0 By MS/MS 10 0 1 1 91.935 92.073 3 0.0063123 106725 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 29.126 24.87 1501500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1501500 55904 1283 50243 470593 373568;373569 373569 2 VGILAIQLK Unmodified 953.62735 0.62735256 3079 Q7Z392 TRAPPC11 Trafficking protein particle complex subunit 11 yes yes 0 0 0 By MS/MS 2 0 1 1 87.969 79.839 2 0.0062381 103965 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 105.39 66.599 3860900 3860900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55905 3079 50244 470594 373570 373570 1 VGILLDEASGVNK Unmodified 1313.7191 0.7190807 2062 Q01780 EXOSC10 Exosome component 10 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 68.485 68.58 2 0.00057508 77647 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 77.379 51.571 60493000 0 0 0 0 5711400 7896300 0 6931500 6352000 9610800 0 0 6803000 7600400 9587200 55906 2062 50245 470595;470596;470597;470598;470599;470600;470601;470602 373571;373572;373573;373574;373575;373576 373575 6 VGINYQPPTVVPGGDLAK Unmodified 1823.9781 0.97814893 1961;3031;4093;1962 P68363;Q71U36;P0DPH8;P0DPH7;Q6PEY2;Q9NY65;Q9BQE3;P68366 TUBA1B;TUBA1A;TUBA3E;TUBA8;TUBA1C;TUBA4A Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-8 chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.12 3.8 1 11 3 26 5 6 4 2 2 2 2 3 2 2 3 2 2 2 2 80.475 79.471 2;3 9.8135E-47 94008 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 171.26 152.13 126200000000 876690000 36069000000 394870000 3446600000 6078600000 6493800000 5850100000 6397900000 4874800000 8801200000 8748000000 9617500000 7363500000 8436700000 12747000000 55907 1961;3031;4093;1962 50246 470603;470604;470605;470606;470607;470608;470609;470610;470611;470612;470613;470614;470615;470616;470617;470618;470619;470620;470621;470622;470623;470624;470625;470626;470627;470628;470629;470630;470631;470632;470633;470634;470635;470636;470637;470638;470639;470640;470641;470642;470643 373577;373578;373579;373580;373581;373582;373583;373584;373585;373586;373587;373588;373589;373590;373591;373592;373593;373594;373595;373596;373597;373598;373599;373600;373601;373602;373603;373604;373605;373606;373607;373608;373609;373610;373611;373612;373613;373614;373615;373616;373617;373618;373619;373620;373621;373622;373623;373624 373599 41 VGIPQENADHDDFDANQLLNK Unmodified 2352.0982 0.09821708 2021 P98082 DAB2 Disabled homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.39 3.7 5 1 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 75.144 74.126 3 4.0183E-100 92026 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145.05 139.84 1288700000 48395000 510060000 17207000 22215000 26454000 36904000 34961000 51199000 55031000 76576000 62791000 65968000 37409000 67255000 176250000 55908 2021 50247 470644;470645;470646;470647;470648;470649;470650;470651;470652;470653;470654;470655;470656;470657;470658;470659;470660;470661 373625;373626;373627;373628;373629;373630;373631;373632;373633;373634;373635;373636;373637;373638;373639;373640;373641;373642;373643;373644;373645;373646;373647;373648 373631 24 VGIQLPEVELSVSTK Unmodified 1597.8927 0.89268797 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 90.606 86.922 2 7.908E-07 107934 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.17 78.498 29209000 0 28612000 597390 0 0 0 0 0 0 0 0 0 0 0 0 55909 2172 50248 470662;470663 373649 373649 1 VGIQQGLLSQSTR Unmodified 1385.7627 0.76267685 4243 Q9BY77 POLDIP3 Polymerase delta-interacting protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.822 59.931 2 1.8248E-05 68201 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 110.39 86.959 138190000 0 0 0 9122800 8010100 8995000 10898000 10260000 9034500 12493000 16399000 15805000 12755000 10082000 14336000 55910 4243 50249 470664;470665;470666;470667;470668;470669;470670;470671;470672;470673;470674;470675 373650;373651;373652;373653;373654;373655;373656;373657;373658;373659;373660;373661;373662 373652 13 VGIRETPENLAK Unmodified 1325.7303 0.73031409 4625 Q9NSD9 FARSB Phenylalanine--tRNA ligase beta subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 3 1 2 44.862 39.163 2;3 0.00038467 54839 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 119.22 62.966 1080600000 957010000 23011000 100540000 0 0 0 0 0 0 0 0 0 0 0 0 55911 4625 50250 470676;470677;470678;470679;470680;470681 373663;373664;373665;373666;373667;373668;373669;373670;373671;373672;373673 373670 9 VGISQENK Unmodified 873.4556 0.45559579 4308 Q9GZU8 FAM192A Protein FAM192A yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 11.588 10.823 2 0.0050992 12908 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145.04 98 184300000 8088200 147630000 1554800 1592000 887180 0 0 1789100 0 3379900 0 4057700 3990500 3714800 7616100 55912 4308 50251 470682;470683;470684;470685;470686;470687;470688;470689;470690;470691;470692 373674;373675;373676;373677;373678;373679;373680;373681 373676 8 VGISQENKK Unmodified 1001.5506 0.55055881 4308 Q9GZU8 FAM192A Protein FAM192A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 8.6514 5.4976 2 0.0098748 7309 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 148.04 97.145 123810000 31159000 47696000 44951000 0 0 0 0 0 0 0 0 0 0 0 0 55913 4308 50252 470693;470694;470695;470696 373682;373683;373684 373684 0 VGIVGNLSSGK Unmodified 1029.5819 0.58185894 3943 Q96P47 AGAP3 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 48.354 46.844 2 0.0050182 51716 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 60.064 35.17 187650000 52115000 45954000 4892300 6519000 6044400 7376300 7678400 7836500 0 8349300 12185000 11318000 0 6903700 10480000 55914 3943 50253 470697;470698;470699;470700;470701;470702;470703;470704;470705;470706;470707;470708;470709;470710 373685;373686;373687;373688;373689;373690;373691;373692;373693;373694;373695;373696 373694 11 VGLAEEMTQQTK Unmodified 1333.6548 0.65476588 5307 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 1 2 1 2 1 2 81.615 81.696 2 0.023338 94559 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 39.022 24.815 + 77806000 0 0 0 1780600 2029600 3743900 2376100 2595200 1500600 0 16496000 7796300 7038100 3839800 28611000 55915 5307 50254 470711;470712;470713;470714;470715;470716;470717;470718;470719;470720;470721;470722;470723;470724 373697;373698;373699 373698 3 VGLAEEMTQQTK Oxidation (M) 1349.6497 0.6496805 5307 yes yes 0 1 0 By MS/MS 1 0 1 1 104.87 105.77 2 0.0103 97497 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 61.962 44.143 + 29161000 0 29161000 0 0 0 0 0 0 0 0 0 0 0 0 0 55916 5307 50254 470725 373700 373700 6711 1 VGLDATNCLRITDLK Unmodified 1687.8927 0.89270474 4731 Q9NXR7 BRE BRCA1-A complex subunit BRE yes yes 0 0 1 By MS/MS 2 0 1 1 81.778 73.647 3 0.021047 96526 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 37.092 18.727 12410000 12410000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55917 4731 50255 470726 373701 373701 1 VGLDPSQLPVGENGIV Unmodified 1592.841 0.84098675 3860 Q96GX9 APIP Methylthioribulose-1-phosphate dehydratase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 6.22 4.24 2 2 5 2 2 1 1 1 1 1 91.894 90.405 2 5.6352E-07 107419 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.21 87.642 137240000 6957500 100590000 0 1209000 0 0 0 0 0 0 3577500 7089500 0 4084900 13730000 55918 3860 50256 470727;470728;470729;470730;470731;470732;470733;470734;470735 373702;373703;373704;373705;373706;373707;373708;373709 373703 8 VGLEPPPGK Unmodified 892.50182 0.5018177 4125 Q9BSD7 NTPCR Cancer-related nucleoside-triphosphatase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 33.491 33.661 2 0.0090061 35818 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.981 31.795 80365000 0 0 0 6490800 5138200 8028100 5696100 5217300 5938900 7810300 8785300 10591000 0 7520400 9148600 55919 4125 50257 470736;470737;470738;470739;470740;470741;470742;470743;470744;470745;470746 373710;373711;373712 373710 3 VGLGFFYK Unmodified 929.50109 0.50108942 4801 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 79.288 79.431 2 0.011473 91833 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 76.847 53.775 38113000 0 0 0 0 0 7642600 3270500 6025000 5268600 0 0 0 7478800 0 8427600 55920 4801 50258 470747;470748;470749;470750;470751;470752 373713;373714;373715;373716;373717;373718 373713 6 VGLLLEYEAQK Unmodified 1261.6918 0.69180331 3571 Q8WW59 SPRYD4 SPRY domain-containing protein 4 yes yes 0 0 0 By MS/MS 2 0 1 1 81.94 73.809 2 0.00045884 96621 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.2 70.65 22122000 22122000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55921 3571 50259 470753 373719 373719 1 VGLPPLEK Unmodified 851.51165 0.5116541 1757 P55084 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 62.791 56.802 2 0.012113 73265 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.28 42.303 93700000 4766100 85741000 3193600 0 0 0 0 0 0 0 0 0 0 0 0 55922 1757 50260 470754;470755;470756 373720;373721 373721 2 VGLQVVAVK Unmodified 911.5804 0.58040237 930 P10809 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 59.458 57.902 2 4.8669E-14 66445 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 170.06 132.41 5314800000 763360000 973690000 38942000 267680000 247080000 324980000 318970000 273240000 227160000 370730000 333980000 270440000 256270000 272880000 375410000 55923 930 50261 470757;470758;470759;470760;470761;470762;470763;470764;470765;470766;470767;470768;470769;470770;470771;470772;470773 373722;373723;373724;373725;373726;373727;373728;373729;373730;373731;373732;373733;373734;373735;373736;373737;373738;373739;373740;373741;373742;373743;373744;373745;373746;373747;373748;373749;373750;373751;373752;373753;373754;373755;373756;373757;373758 373757 36 VGLSEMAQK Oxidation (M) 977.48518 0.48518136 3388 Q8NB90 SPATA5 Spermatogenesis-associated protein 5 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 21.05 17.28 2 0.0063817 22772 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.195 46.532 35739000 0 35739000 0 0 0 0 0 0 0 0 0 0 0 0 0 55924 3388 50262 470774;470775 373759 373759 4950 1 VGLSEMAQK Unmodified 961.49027 0.49026674 3388 Q8NB90 SPATA5 Spermatogenesis-associated protein 5 yes yes 0 0 0 By MS/MS 2 0 1 1 40.359 35.307 2 0.007613 45941 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.523 65.165 60886000 0 60886000 0 0 0 0 0 0 0 0 0 0 0 0 0 55925 3388 50262 470776 373760 373760 1 VGLSPDSPAGDRNSVGSEGSVGSIR Unmodified 2399.1677 0.16769363 3588 Q8WXE0 CASKIN2 Caskin-2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.394 55.522 3 1.6632E-33 62830 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 95.206 80.592 160690000 0 0 0 8084100 9088600 10655000 12699000 12087000 10779000 15992000 17013000 17911000 12744000 11726000 21906000 55926 3588 50263 470777;470778;470779;470780;470781;470782;470783;470784;470785;470786;470787;470788 373761;373762;373763;373764;373765;373766;373767;373768;373769;373770;373771;373772;373773 373771 13 VGLSQDAQDQMRK Unmodified 1474.7198 0.71982575 700 O95835 LATS1 Serine/threonine-protein kinase LATS1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 30.371 30.546 3 0.0003099 31779 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.11 52.283 79358000 0 0 0 4320900 4112400 5737800 4136100 5067800 4928900 8941300 9557500 10962000 0 6699900 14893000 55927 700 50264 470789;470790;470791;470792;470793;470794;470795;470796;470797;470798;470799 373774;373775;373776 373775 3 VGLTSEILNSFEHEFLSK Unmodified 2049.0419 0.0418714 2385 Q14181 POLA2 DNA polymerase alpha subunit B yes yes 0 0 0 By MS/MS 3 0 1 1 99.707 96.299 3 2.5361E-05 115565 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 83.758 77.642 7542000 0 7542000 0 0 0 0 0 0 0 0 0 0 0 0 0 55928 2385 50265 470800 373777 373777 1 VGLTVGYQIR Unmodified 1104.6291 0.62914348 2914 Q6P158 DHX57 Putative ATP-dependent RNA helicase DHX57 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.142 79.201 2 0.036868 91428 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 41.029 16.21 230920000 0 0 0 14874000 8045200 12924000 9552500 19704000 12294000 22998000 26877000 25028000 16511000 17973000 44138000 55929 2914 50266 470801;470802;470803;470804;470805;470806;470807;470808;470809;470810;470811;470812 373778 373778 1 VGLVASQK Unmodified 800.4756 0.47560295 770 P04062 GBA Glucosylceramidase yes yes 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 20.916 21.127 2 0.01504 22177 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 111.65 32.654 63434000 0 0 0 45705000 0 0 0 0 7543600 0 0 0 0 0 10185000 55930 770 50267 470813;470814;470815 373779 373779 0 VGLVEDSPSTAGDGDDSPVVSLTVPSTSPPSSSGLSR Unmodified 3555.7064 0.70640992 2988 Q6VY07 PACS1 Phosphofurin acidic cluster sorting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 85.168 85.326 3 3.8184E-15 98695 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.062 33.401 15435000 0 0 0 0 0 0 0 0 0 3950900 5961200 0 0 0 5522500 55931 2988 50268 470816;470817;470818 373780;373781;373782 373781 3 VGLVIGRGGETIK Unmodified 1297.7718 0.77178497 3873 Q96I24 FUBP3 Far upstream element-binding protein 3 yes yes 0 0 1 By MS/MS 2 0 1 1 64.54 56.261 3 0.0087822 75661 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 39.424 22.213 11738000 11738000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55932 3873 50269 470819 373783 373783 1 VGLVQYQSTSEEK Unmodified 1466.7253 0.72528829 2865 Q6AI39 GLTSCR1L GLTSCR1-like protein yes yes 0 0 0 By MS/MS 2 0 1 1 47.445 41.882 2 4.6309E-11 54581 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.89 82.207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55933 2865 50270 470820 373784 373784 1 VGLYDTYSNKPPQISSTYHK Unmodified 2297.1328 0.13281167 3518 Q8TEQ6 GEMIN5 Gem-associated protein 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.47 2 1 14 1 2 1 1 1 2 1 1 2 1 2 59.512 59.192 3;4 0.001177 79709 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.469 35.556 164330000 30530000 0 0 0 0 15894000 6364700 9022200 6840700 15616000 5675900 19978000 16549000 10550000 27313000 55934 3518 50271 470821;470822;470823;470824;470825;470826;470827;470828;470829;470830;470831;470832;470833;470834;470835 373785;373786;373787 373787 2 VGMGSSYNGQDEVDIK Oxidation (M) 1713.7516 0.75157939 4282 Q9C0B1 FTO Alpha-ketoglutarate-dependent dioxygenase FTO yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 41.057 41.658 2 0.0044896 46230 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 58.674 52.141 9849200 0 0 0 0 0 0 0 0 0 0 4068300 0 0 0 5780800 55935 4282 50272 470836;470837 373788;373789 373789 5741 0 VGMIPVPYVEK Oxidation (M) 1246.6631 0.66314572 1500 P46109 CRKL Crk-like protein yes yes 0 1 0 By matching By matching By matching By matching By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 71.1 71.25 2 0.0034192 81373 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.645 34.723 49976000 0 0 0 0 1946000 0 2682500 0 0 3982900 10718000 10711000 0 5753600 14182000 55936 1500 50273 470838;470839;470840;470841;470842;470843;470844 373790;373791 373791 2369 2 VGMIPVPYVEK Unmodified 1230.6682 0.6682311 1500 P46109 CRKL Crk-like protein yes yes 0 0 0 By matching By matching By MS/MS By matching 10 0 4 1 1 1 1 79.775 79.811 2 0.022471 91342 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 41.876 24.057 43761000 0 0 0 0 1617700 0 0 0 0 0 0 0 2419200 8455000 31270000 55937 1500 50273 470845;470846;470847;470848 373792 373792 1 VGMLNGGR Unmodified 802.41196 0.41195684 5301 Q9Y6Y8 SEC23IP SEC23-interacting protein yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 24.22 24.095 2 0.035132 25398 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 52.683 34.916 6825700 0 0 0 943330 2818000 0 0 0 3064400 0 0 0 0 0 0 55938 5301 50274 470849;470850;470851 373793 373793 1 VGMVETNSQDRPVDDVK Oxidation (M) 1903.8946 0.89455524 5157 Q9Y3C6 PPIL1 Peptidyl-prolyl cis-trans isomerase-like 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 2 2 1 1 2 1 2 2 2 2 2 30.178 30.335 3 2.6468E-08 32723 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 97.836 80.956 254880000 0 0 0 20303000 17673000 12900000 11207000 18807000 7676800 28551000 30263000 0 32121000 31576000 43807000 55939 5157 50275 470852;470853;470854;470855;470856;470857;470858;470859;470860;470861;470862;470863;470864;470865;470866;470867;470868;470869;470870 373794;373795;373796;373797;373798;373799;373800;373801;373802;373803;373804;373805;373806;373807;373808 373802 6534 13 VGMVETNSQDRPVDDVK Unmodified 1887.8996 0.89964061 5157 Q9Y3C6 PPIL1 Peptidyl-prolyl cis-trans isomerase-like 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.161 40.341 3 2.2582E-28 44919 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 112.5 93.668 239950000 0 0 0 9222300 14225000 15822000 11065000 11977000 10004000 20454000 26608000 33250000 15667000 19985000 51672000 55940 5157 50275 470871;470872;470873;470874;470875;470876;470877;470878;470879;470880;470881;470882 373809;373810;373811;373812;373813;373814;373815;373816;373817;373818;373819;373820;373821 373817 13 VGNESPVQELK Unmodified 1198.6194 0.61936665 2734 Q5JSH3 WDR44 WD repeat-containing protein 44 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 41.32 40.107 2 2.9827E-17 51316 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 177.78 146.7 867010000 14456000 677300000 6799000 7462900 0 4913000 8089300 8992800 6166300 13361000 19784000 21223000 15119000 19358000 43989000 55941 2734 50276 470883;470884;470885;470886;470887;470888;470889;470890;470891;470892;470893;470894;470895;470896;470897 373822;373823;373824;373825;373826;373827;373828;373829;373830;373831;373832;373833;373834;373835;373836;373837;373838;373839 373827 17 VGNEVATGTGPNK Unmodified 1242.6204 0.62042929 4647 Q9NUL3 STAU2 Double-stranded RNA-binding protein Staufen homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 16.08 15.674 2 1.2653E-11 14359 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 121.6 81.981 23797000 0 6028700 0 0 1372000 1726300 0 0 1937000 2380900 0 0 4178400 6173800 0 55942 4647 50277 470898;470899;470900;470901;470902;470903;470904 373840;373841;373842;373843;373844 373843 5 VGNGLSASK Unmodified 831.44503 0.4450311 3074 Q7Z2Y8 GVINP1 Interferon-induced very large GTPase 1 yes yes 0 0 0 By MS/MS 3 0 1 1 4.1507 0.77917 2 0.040102 2831 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 60.76 0 7154300 0 7154300 0 0 0 0 0 0 0 0 0 0 0 0 0 55943 3074 50278 470905 373845 373845 1 VGNIEIK Unmodified 771.44905 0.44905385 1836 P61160 ACTR2 Actin-related protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 32.687 31.68 2 0.01917 33544 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 110.61 53.148 1447900000 7671700 1113700000 0 0 28270000 0 0 21918000 0 0 63277000 54259000 33868000 33949000 91017000 55944 1836 50279 470906;470907;470908;470909;470910;470911;470912;470913;470914 373846;373847;373848;373849;373850;373851;373852 373851 6 VGNIPSSTSALK Unmodified 1172.6401 0.6401021 1396 P38398 BRCA1 Breast cancer type 1 susceptibility protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 42.91 43.059 2 0.028861 48106 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 37.344 8.0346 24810000 0 0 0 0 3127000 0 0 4683000 0 3874000 3598900 0 5951300 3575300 0 55945 1396 50280 470915;470916;470917;470918;470919;470920 373853 373853 1 VGNLGLATSFFNER Unmodified 1523.7732 0.77324153 170 O00571 DDX3X ATP-dependent RNA helicase DDX3X yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 86.017 86.084 2 8.5949E-08 99751 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 93.839 83.316 289000000 0 0 0 3678700 12282000 19569000 12268000 22617000 20610000 43689000 30055000 32026000 14074000 17827000 60300000 55946 170 50281 470921;470922;470923;470924;470925;470926;470927;470928;470929;470930;470931;470932 373854;373855;373856;373857;373858;373859;373860;373861;373862;373863 373863 8 VGNLTVVGK Unmodified 885.52837 0.5283668 1049 P17174 GOT1 Aspartate aminotransferase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 36.66 37.013 2 0.0037825 39433 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.367 35.009 131320000 0 0 0 6318100 0 0 0 0 0 0 19706000 17143000 0 14690000 73461000 55947 1049 50282 470933;470934;470935;470936;470937 373864;373865;373866;373867 373864 3 VGNNFHNLQEIR Unmodified 1439.727 0.72696004 5013 Q9UM13 ANAPC10 Anaphase-promoting complex subunit 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 46.695 46.874 3 0.00050304 52626 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 74.46 61.026 83662000 0 0 0 5983800 7095900 7183600 0 0 0 8075000 8493200 10707000 7898300 12207000 16018000 55948 5013 50283 470938;470939;470940;470941;470942;470943;470944;470945;470946 373868;373869;373870;373871;373872;373873;373874;373875;373876;373877 373869 10 VGNPFELDTQQGPQVDK Unmodified 1870.9061 0.9061062 1290 P30837 ALDH1B1 Aldehyde dehydrogenase X, mitochondrial yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 75.208 71.652 2 1.2036E-08 89743 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.15 88.519 1538900 0 1538900 0 0 0 0 0 0 0 0 0 0 0 0 0 55949 1290 50284 470947;470948 373878;373879 373878 2 VGNQIFQSR Unmodified 1047.5461 0.54614213 4 A0FGR8 ESYT2 Extended synaptotagmin-2 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.589 37.77 2 0.0038307 41700 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 96.668 63.669 86582000 0 0 0 4447400 1751900 6958600 6964800 7985700 5301200 9289800 9487000 9487400 10114000 6655300 8139700 55950 4 50285 470949;470950;470951;470952;470953;470954;470955;470956;470957;470958;470959;470960 373880;373881;373882;373883;373884;373885;373886 373880 5 VGNTGGPPHTHGASR Unmodified 1443.6967 0.69672255 2445 Q14781 CBX2 Chromobox protein homolog 2 yes yes 0 0 0 By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 14 1 2 1 1 1 1 1 1 2 1 1 1 8.5587 8.6877 3 0.0035322 4610 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 44.252 34.2 33156000 0 0 0 705610 4475500 1759800 1650300 1323400 1287300 2020700 2474500 13343000 1502900 1120300 1492900 55951 2445 50286 470961;470962;470963;470964;470965;470966;470967;470968;470969;470970;470971;470972;470973;470974 373887;373888;373889;373890 373889 4 VGNTPETR Unmodified 872.43519 0.4351947 5151 Q9Y3B4 SF3B6 Splicing factor 3B subunit 6 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 6.7305 6.868 2 0.0058845 5041 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 105.14 75.798 123520000 0 0 0 0 12071000 19380000 0 17562000 19290000 9038600 14179000 11820000 10490000 9690000 0 55952 5151 50287 470975;470976;470977;470978;470979;470980;470981;470982;470983 373891;373892;373893;373894;373895;373896;373897 373894 6 VGNYETDTNSSVDQEK Unmodified 1784.7701 0.77006623 3418 Q8NDI1 EHBP1 EH domain-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.597 26.798 2 2.401E-20 28512 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 111.39 97.482 52504000 0 0 0 2979100 2742300 4297800 3811400 4393800 3621100 5485100 5435500 6922200 3681100 3434200 5700200 55953 3418 50288 470984;470985;470986;470987;470988;470989;470990;470991;470992;470993;470994;470995 373898;373899;373900;373901;373902;373903;373904;373905;373906;373907;373908;373909 373903 12 VGPADDGPAPSGEEEGEGGGEAGGK Unmodified 2224.9356 0.93562801 4973 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 2 2 1 2 2 2 2 2 2 31.768 32.057 2;3 5.2297E-86 34907 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 152.94 145.21 187580000 0 0 0 0 4173300 27590000 12467000 0 9056500 20786000 20978000 21574000 23868000 16787000 30302000 55954 4973 50289 470996;470997;470998;470999;471000;471001;471002;471003;471004;471005;471006;471007;471008;471009;471010;471011;471012;471013 373910;373911;373912;373913;373914;373915;373916;373917;373918;373919;373920 373915 11 VGPADDGPAPSGEEEGEGGGEAGGKEPAADAAPGPSAAFR Unmodified 3633.6092 0.6091555 4973 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 2 2 1 1 2 2 1 2 1 60.101 60.218 3;4 7.5157E-58 68765 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 69.334 67.207 108460000 0 0 0 5197500 15438000 0 11064000 5846200 0 7736700 14691000 16400000 8321100 13537000 10228000 55955 4973 50290 471014;471015;471016;471017;471018;471019;471020;471021;471022;471023;471024;471025;471026;471027;471028 373921;373922;373923;373924;373925;373926;373927;373928;373929;373930;373931 373929 10 VGPATPSAQVGK Unmodified 1110.6033 0.60332266 2289 Q13428 TCOF1 Treacle protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 28.506 28.343 2 2.6574E-09 29725 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 143.39 127.85 592260000 0 14466000 0 34073000 32966000 28129000 33010000 37642000 32565000 42423000 83178000 59892000 60575000 53318000 80021000 55956 2289 50291 471029;471030;471031;471032;471033;471034;471035;471036;471037;471038;471039;471040;471041 373932;373933;373934;373935;373936;373937;373938;373939;373940;373941;373942;373943;373944 373936 13 VGPDVVTDPAFLVTR Unmodified 1584.8512 0.8511575 4658 Q9NV31 IMP3 U3 small nucleolar ribonucleoprotein protein IMP3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 85.177 85.232 2 0.008598 99171 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 49.5 43.529 69804000 0 0 0 4827400 8766700 6417700 4347500 4709900 4068600 6982300 0 9434200 5795500 4454900 9999700 55957 4658 50292 471042;471043;471044;471045;471046;471047;471048;471049;471050;471051;471052 373945;373946 373946 2 VGPEELPVVGQLLR Unmodified 1504.8613 0.86132826 4724 Q9NXF1 TEX10 Testis-expressed sequence 10 protein yes yes 0 0 0 By MS/MS 10 0 1 1 93.07 93.207 2 0.0064047 108088 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.512 32.989 1857100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1857100 55958 4724 50293 471053 373947 373947 1 VGPEGPMGTELGDFLR Oxidation (M) 1689.8032 0.80322103 2297 Q13470 TNK1 Non-receptor tyrosine-protein kinase TNK1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 82.324 82.391 2 4.7221E-06 95290 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 78.692 63.426 18339000 0 0 0 0 2041400 2794900 0 2530800 0 3567200 2554100 4850700 0 0 0 55959 2297 50294 471054;471055;471056;471057;471058;471059 373948;373949;373950;373951;373952 373951 3760 4 VGPELLPPPK Unmodified 1045.6172 0.61718181 2142 Q07864 POLE DNA polymerase epsilon catalytic subunit A yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 61.92 61.045 2 0.0018803 78064 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.74 89.96 186770000 0 133370000 2933800 2872600 2699100 4628300 2727100 4384000 2440900 4523100 6353100 5138500 4351900 3320100 7026300 55960 2142 50295 471060;471061;471062;471063;471064;471065;471066;471067;471068;471069;471070;471071;471072;471073;471074;471075 373953;373954;373955;373956;373957;373958;373959;373960;373961;373962;373963;373964;373965 373957 12 VGPGAGESPGTPPFR Unmodified 1424.7048 0.70482762 3518 Q8TEQ6 GEMIN5 Gem-associated protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 51.593 51.859 2 7.2892E-05 58949 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 74.76 46.555 72764000 0 0 0 0 3362100 0 0 5289200 0 6797100 7965300 13745000 9137600 7132200 19335000 55961 3518 50296 471076;471077;471078;471079;471080;471081;471082;471083;471084 373966;373967;373968;373969;373970;373971;373972;373973;373974 373970 9 VGPGDRPLYLHVQGQTR Unmodified 1892.0017 0.0016783401 3123 Q7Z7F0 KIAA0907 UPF0469 protein KIAA0907 yes yes 0 0 1 By MS/MS 10 0 1 1 49.313 50.024 4 0.0041946 55566 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.52 15.726 27461000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27461000 55962 3123 50297 471085 373975 373975 1 VGPGPALMLR Oxidation (M) 1025.5692 0.56918576 248 O15067 PFAS Phosphoribosylformylglycinamidine synthase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 57.022 57.465 2 0.0054095 64764 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.59 44.117 46697000 0 0 0 0 0 0 0 0 0 0 7360200 8523300 0 10629000 20184000 55963 248 50298 471086;471087;471088;471089 373976;373977;373978;373979 373976 337 4 VGPGPALMLR Unmodified 1009.5743 0.57427114 248 O15067 PFAS Phosphoribosylformylglycinamidine synthase yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 67.436 67.849 2 0.020615 78005 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 61.999 45.072 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55964 248 50298 471090;471091 373980;373981 373981 2 VGPNAEPR Unmodified 838.42972 0.42971539 4807 Q9P260 KIAA1468 LisH domain and HEAT repeat-containing protein KIAA1468 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 12.016 12.08 2 0.013643 11141 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 71.877 48.948 19861000 0 0 0 0 2433300 3996400 2657700 0 0 4530500 0 0 3272700 2970700 0 55965 4807 50299 471092;471093;471094;471095;471096;471097 373982;373983 373982 2 VGPQVPLSEPGFR Unmodified 1381.7354 0.73539946 4423 Q9H6S3 EPS8L2 Epidermal growth factor receptor kinase substrate 8-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 72.575 72.75 2 5.9628E-05 83762 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 87.806 76.444 112660000 0 0 0 0 0 16719000 8149400 5846100 3492100 14980000 15332000 12671000 9504000 10065000 15905000 55966 4423 50300 471098;471099;471100;471101;471102;471103;471104;471105;471106;471107 373984;373985;373986;373987;373988;373989;373990;373991;373992;373993 373985 10 VGPQYQAVVPDFDPAK Unmodified 1729.8675 0.86753585 4971 Q9UKL0 RCOR1 REST corepressor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.6 1.74 1 19 1 2 2 1 2 1 1 1 2 2 2 2 1 79.674 79.459 2;3 5.5851E-113 91746 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 198.57 166.32 768900000 0 24252000 0 39893000 63492000 52745000 56950000 59019000 47628000 78270000 76694000 94219000 6914500 74295000 94528000 55967 4971 50301 471108;471109;471110;471111;471112;471113;471114;471115;471116;471117;471118;471119;471120;471121;471122;471123;471124;471125;471126;471127 373994;373995;373996;373997;373998;373999;374000;374001;374002;374003;374004;374005;374006 373998 12 VGPSDDTPR Unmodified 942.44067 0.44067401 4024 Q99570 PIK3R4 Phosphoinositide 3-kinase regulatory subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 14.691 14.801 2 0.019674 13431 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 53.775 35.084 82788000 0 0 0 6625300 5408500 8145300 8191300 5759800 6686600 11216000 9686600 0 9607500 11461000 0 55968 4024 50302 471128;471129;471130;471131;471132;471133;471134;471135;471136;471137 374007 374007 1 VGQADDSTKPTNK Unmodified 1359.663 0.66302238 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 1 2 2 2 5.9291 6.0483 2;3 1.7248E-13 3772 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 138.89 125.46 287110000 0 0 0 22192000 20616000 17650000 30749000 35309000 24499000 22827000 24517000 4289200 28950000 24204000 31312000 55969 1364 50303 471138;471139;471140;471141;471142;471143;471144;471145;471146;471147;471148;471149;471150;471151;471152;471153;471154;471155;471156;471157;471158;471159;471160 374008;374009;374010;374011;374012;374013;374014;374015;374016;374017;374018;374019 374010 11 VGQALLQGNTER Unmodified 1284.6786 0.67861287 2122 Q06124 PTPN11 Tyrosine-protein phosphatase non-receptor type 11 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 38.376 38.714 2 0.0016638 41776 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.379 54.799 28041000 0 0 0 0 0 2079200 3274800 2636200 0 2346900 4591400 4456800 2748900 0 5907200 55970 2122 50304 471161;471162;471163;471164;471165;471166;471167;471168 374020;374021 374021 2 VGQAMASTEEK Unmodified 1149.5336 0.53358811 1520 P46977 STT3A Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 14.284 14.345 2 0.00026047 13779 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 91.658 45.268 6113800 0 0 0 3296100 0 0 0 1220200 0 1597400 0 0 0 0 0 55971 1520 50305 471169;471170;471171 374022;374023 374023 2 VGQASEIAR Unmodified 929.49304 0.49304393 4010 Q99459 CDC5L Cell division cycle 5-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.366 16.546 2 2.7522E-05 16470 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 139.88 20.704 570120000 0 0 0 24964000 27339000 35958000 25329000 27343000 25643000 47798000 58806000 72688000 68168000 79143000 76945000 55972 4010 50306 471172;471173;471174;471175;471176;471177;471178;471179;471180;471181;471182;471183 374024;374025;374026;374027;374028;374029;374030;374031;374032;374033;374034 374031 2 VGQAVALR Unmodified 812.48684 0.48683634 2276 Q13363 CTBP1 C-terminal-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.046 27.243 2 0.014742 28088 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 69.998 16.836 143060000 0 0 0 6814000 7346000 13697000 10386000 9545200 6133800 11860000 14453000 15575000 13612000 11106000 22529000 55973 2276 50307 471184;471185;471186;471187;471188;471189;471190;471191;471192;471193;471194;471195 374035;374036;374037;374038;374039;374040;374041;374042;374043;374044;374045;374046;374047 374044 13 VGQAVDVVGQAGK Unmodified 1226.6619 0.66190017 2252 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.974 38.104 2 8.7752E-12 40900 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 117.14 91.197 377670000 0 0 0 14349000 22605000 61228000 11476000 12273000 14611000 59632000 58295000 81674000 21235000 20286000 0 55974 2252 50308 471196;471197;471198;471199;471200;471201;471202;471203;471204;471205;471206;471207 374048;374049;374050;374051;374052;374053;374054;374055;374056;374057;374058;374059 374051 12 VGQAVDVVGQAGKPK Unmodified 1451.8096 0.80962704 2252 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.663 34.846 3 1.8764E-22 38905 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 129.77 115.74 1896500000 0 0 0 124780000 115640000 118200000 76416000 51021000 41951000 275530000 321310000 428450000 85787000 83562000 173890000 55975 2252 50309 471208;471209;471210;471211;471212;471213;471214;471215;471216;471217;471218;471219 374060;374061;374062;374063;374064;374065;374066;374067;374068;374069;374070;374071;374072 374072 12 VGQDPALPADTLLLGDGDAGSLTSASQR Unmodified 2724.3566 0.35661661 3559 Q8WVB6 CHTF18 Chromosome transmission fidelity protein 18 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 2 1 1 2 2 2 2 2 2 1 2 88.045 88.13 2;3 7.956E-86 102364 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 95.823 89.459 192150000 0 0 0 1780000 14411000 12597000 7695100 17072000 11433000 27281000 20586000 23346000 10466000 14483000 31005000 55976 3559 50310 471220;471221;471222;471223;471224;471225;471226;471227;471228;471229;471230;471231;471232;471233;471234;471235;471236;471237;471238;471239 374073;374074;374075;374076;374077;374078;374079;374080;374081;374082;374083;374084;374085;374086;374087;374088;374089;374090;374091 374086 19 VGQDPVLR Unmodified 882.49232 0.49231565 2107 Q04837 SSBP1 Single-stranded DNA-binding protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 27.931 28.251 2 0.013375 29245 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.492 28.684 41035000 0 0 0 3157300 0 0 4320400 0 0 0 9965700 9322300 0 0 14269000 55977 2107 50311 471240;471241;471242;471243;471244 374092;374093 374092 2 VGQEIEVRPGIVSK Unmodified 1509.8515 0.85149185 1427 P41091 EIF2S3 Eukaryotic translation initiation factor 2 subunit 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.29 6 1 24 2 3 2 2 2 2 2 2 2 2 2 2 2 2 2 52.49 51.293 2;3 3.1916E-47 70813 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 179.67 160.71 4132700000 935090000 508590000 397400000 106950000 87247000 184460000 120110000 111590000 125690000 169230000 253640000 301390000 195200000 203680000 432480000 55978 1427 50312 471245;471246;471247;471248;471249;471250;471251;471252;471253;471254;471255;471256;471257;471258;471259;471260;471261;471262;471263;471264;471265;471266;471267;471268;471269;471270;471271;471272;471273;471274;471275 374094;374095;374096;374097;374098;374099;374100;374101;374102;374103;374104;374105;374106;374107;374108;374109;374110;374111;374112;374113;374114;374115;374116;374117;374118;374119;374120;374121;374122;374123;374124;374125;374126;374127;374128;374129 374112 33 VGQGYPHDPPK Unmodified 1193.5829 0.58292157 1831 P61081 UBE2M NEDD8-conjugating enzyme Ubc12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.43 3.14 5 1 24 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 19.782 19.169 2;3 2.5739E-16 23712 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 162.64 143.85 2211200000 132020000 1293400000 284430000 31531000 23183000 64789000 35659000 31387000 20680000 69178000 59497000 5736200 37721000 39144000 82820000 55979 1831 50313 471276;471277;471278;471279;471280;471281;471282;471283;471284;471285;471286;471287;471288;471289;471290;471291;471292;471293;471294;471295;471296;471297;471298;471299;471300;471301;471302;471303;471304;471305 374130;374131;374132;374133;374134;374135;374136;374137;374138;374139;374140;374141;374142;374143;374144;374145;374146;374147 374139 17 VGQLSEGAIAAIMQK Oxidation (M) 1530.8076 0.80757813 1221 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed yes yes 0 1 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 2 2 1 2 2 1 2 1 2 70.142 70.292 2 0.00020576 81133 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 79.201 56.189 77251000 0 0 0 0 1893200 9637400 6982100 1785100 0 13410000 10284000 6644400 7713700 5723800 13177000 55980 1221 50314 471306;471307;471308;471309;471310;471311;471312;471313;471314;471315;471316;471317;471318;471319;471320;471321 374148;374149;374150;374151;374152;374153;374154;374155;374156;374157;374158;374159;374160 374157 1795 6 VGQLSEGAIAAIMQK Unmodified 1514.8127 0.81266351 1221 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.69 1 1 3 1 1 1 1 1 84.281 82.074 2 0.00042467 95530 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 64.55 49.285 64886000 36018000 2469600 0 0 0 4445300 0 0 0 5571100 0 0 0 0 16382000 55981 1221 50314 471322;471323;471324;471325;471326 374161;374162;374163;374164;374165 374161 5 VGQMLPPAPGFR Oxidation (M) 1284.6649 0.66487706 3133 Q86TB9 PATL1 Protein PAT1 homolog 1 yes yes 0 1 0 By MS/MS By matching By matching 10 0 3 1 1 1 61.218 61.225 2 0.013646 70183 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 40.352 28.397 5909800 0 0 0 0 2459300 0 0 0 2132800 0 1317700 0 0 0 0 55982 3133 50315 471327;471328;471329 374166 374166 4755 1 VGQSEIR Unmodified 787.41882 0.41881635 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 10.775 10.804 2 0.04445 9564 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.799 22.078 32010000 0 0 0 671530 0 9498800 7492100 5824600 0 8522900 0 0 0 0 0 55983 3119 50316 471330;471331;471332;471333;471334 374167 374167 1 VGQTAFDVADEDILGYLEELQK Unmodified 2452.201 0.20095082 232 O14974 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 101.7 97.607 3 0.029007 117176 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 21.37 18.793 19177000 0 19177000 0 0 0 0 0 0 0 0 0 0 0 0 0 55984 232 50317 471335;471336 374168 374168 1 VGQTIER Unmodified 801.43447 0.43446642 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 11.486 11.634 2 0.017021 11092 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 114.78 40.368 1188600000 0 0 0 61845000 59894000 77156000 60700000 72908000 49854000 108620000 91545000 214180000 138120000 79624000 174140000 55985 1681 50318 471337;471338;471339;471340;471341;471342;471343;471344;471345;471346;471347;471348 374169;374170;374171;374172;374173;374174;374175;374176;374177;374178;374179;374180;374181;374182 374169 13 VGQVDMDIK Oxidation (M) 1019.4957 0.49574604 378 O43896 KIF1C Kinesin-like protein KIF1C yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 2 1 23.246 23.52 2 0.032178 24955 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 60.91 28.44 5778400 0 0 0 0 0 0 0 0 1487100 0 0 0 1801100 2490200 0 55986 378 50319 471349;471350;471351;471352;471353;471354 374183;374184;374185;374186 374186 4 VGQVDMDIK Unmodified 1003.5008 0.50083142 378 O43896 KIF1C Kinesin-like protein KIF1C yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 43.269 43.259 2 0.004955 49269 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 85.161 54.976 34900000 0 0 0 4916700 3584900 0 0 0 0 0 0 0 0 10645000 15753000 55987 378 50319 471355;471356;471357;471358;471359 374187;374188;374189;374190 374190 4 VGQYVSRAEELK Unmodified 1377.7252 0.72522871 2949 Q6PHR2 ULK3 Serine/threonine-protein kinase ULK3 yes yes 0 0 1 By MS/MS 2 0 1 1 47.906 40.192 3 0.0062733 55939 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.49 28.893 34953000 34953000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55988 2949 50320 471360 374191 374191 1 VGRFQVTTTANK Unmodified 1320.715 0.71499837 4393 Q9H4A3 WNK1 Serine/threonine-protein kinase WNK1 yes yes 0 0 1 By MS/MS 2 0 1 1 38.114 31.617 3 0.0062619 44005 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.423 28.635 12404000 12404000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55989 4393 50321 471361 374192 374192 1 VGRITTTEDFK Unmodified 1265.6616 0.66156582 4254 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 yes yes 0 0 1 By MS/MS 2 0 1 1 42.439 35.703 3 0.015141 49380 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.942 53.999 57499000 57499000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55990 4254 50322 471362 374193 374193 0 VGRPSNIGQAQPIIDQLAEEAR Unmodified 2361.2401 0.24007071 4912 Q9UHX1 PUF60 Poly(U)-binding-splicing factor PUF60 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.088 82.15 3 2.1414E-33 94586 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.684 87.384 563410000 0 0 0 3731200 6973700 22152000 8182100 27743000 26391000 88652000 47427000 39255000 9519900 36116000 247270000 55991 4912 50323 471363;471364;471365;471366;471367;471368;471369;471370;471371;471372;471373;471374 374194;374195;374196;374197;374198;374199;374200;374201;374202;374203;374204;374205;374206;374207;374208 374198 15 VGRPTASK Unmodified 814.4661 0.4661009 4349 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 0 0 1 By MS/MS By matching 2 0 2 1 1 6.2271 2.8908 2 0.024664 5800 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 137.9 58.436 2057500000 1983300000 74244000 0 0 0 0 0 0 0 0 0 0 0 0 0 55992 4349 50324 471375;471376 374209 374209 0 VGRRPDQQLQGEGK Unmodified 1566.8227 0.82265134 3405 Q8NC51 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 26 2 2 2 2 2 2 2 3 2 2 2 3 13.889 14.075 3;4 7.0612E-20 13152 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 131.66 131.66 2821500000 0 0 0 153080000 164250000 117670000 170310000 117940000 106280000 289350000 273290000 528130000 261770000 236870000 402510000 55993 3405 50325 471377;471378;471379;471380;471381;471382;471383;471384;471385;471386;471387;471388;471389;471390;471391;471392;471393;471394;471395;471396;471397;471398;471399;471400;471401;471402 374210;374211;374212;374213;374214;374215;374216;374217;374218;374219;374220;374221;374222;374223;374224;374225;374226;374227;374228;374229;374230;374231;374232;374233;374234;374235 374219 15 VGRVQQIYSDSDLK Unmodified 1606.8315 0.83148469 3211 Q86YT6 MIB1 E3 ubiquitin-protein ligase MIB1 yes yes 0 0 1 By MS/MS 2 0 2 2 55.899 47.752 2;3 0.0025963 65243 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.009 38.242 19432000 19432000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 55994 3211 50326 471403;471404 374236;374237 374236 2 VGSAQPSPPDDLDAGGLAQR Unmodified 1949.9443 0.94428262 3321 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 yes yes 0 0 0 By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 61.745 61.719 2 0.0018878 70152 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.628 52.323 31449000 0 0 0 3364300 2058000 3459700 2965700 3591400 2277600 5026600 0 0 4103900 4602400 0 55995 3321 50327 471405;471406;471407;471408;471409;471410;471411;471412;471413;471414 374238;374239;374240 374240 3 VGSDMTSQQEFTSCLK Unmodified 1816.7971 0.79714938 1421 P40855 PEX19 Peroxisomal biogenesis factor 19 yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 60.97 61.143 2 1.6269E-35 69697 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 151.79 130.54 36322000 0 0 0 1754400 0 0 2040500 0 1488900 3384100 4259700 7726000 0 4223300 11445000 55996 1421 50328 471415;471416;471417;471418;471419;471420;471421;471422 374241;374242;374243;374244;374245 374245 5 VGSEIER Unmodified 788.40283 0.40283194 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 11.851 12.001 2 0.02218 11301 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 105.39 48.88 1050900000 0 0 0 54967000 52563000 68435000 61295000 65053000 48439000 105690000 74361000 135990000 134600000 86491000 163020000 55997 1681 50329 471423;471424;471425;471426;471427;471428;471429;471430;471431;471432;471433;471434 374246;374247;374248;374249;374250;374251;374252;374253;374254;374255;374256;374257;374258;374259 374247 11 VGSFDPYSDDPR Unmodified 1353.5837 0.58370943 2920 Q6P1M3 LLGL2 Lethal(2) giant larvae protein homolog 2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 50.608 50.373 2 0.023867 57507 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 38.754 26.528 8434000 0 0 0 0 5202300 0 3231700 0 0 0 0 0 0 0 0 55998 2920 50330 471435;471436 374260 374260 1 VGSFDPYSDDPRLGIQK Unmodified 1892.9268 0.92684164 2920 Q6P1M3 LLGL2 Lethal(2) giant larvae protein homolog 2 yes yes 0 0 1 By MS/MS 2 0 1 1 72.306 69.221 3 0.034879 84783 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 28.212 22.18 3051000 0 0 3051000 0 0 0 0 0 0 0 0 0 0 0 0 55999 2920 50331 471437 374261 374261 1 VGSGDTNNFPYLEK Unmodified 1539.7205 0.72053726 4591 Q9NR45 NANS Sialic acid synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 2 1 1 1 1 1 1 1 1 1 65.703 64.391 2 1.1391E-151 81169 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 240.21 219.91 2315000000 29281000 2136300000 10069000 2058100 0 5499900 2993700 3376900 2626100 4014900 25135000 24758000 4067200 14661000 50152000 56000 4591 50332 471438;471439;471440;471441;471442;471443;471444;471445;471446;471447;471448;471449;471450;471451;471452;471453 374262;374263;374264;374265;374266;374267;374268;374269;374270;374271;374272;374273;374274;374275;374276;374277;374278;374279 374266 16 VGSGSLDNLGR Unmodified 1073.5465 0.54653606 2239 Q13136 PPFIA1 Liprin-alpha-1 yes yes 0 0 0 By MS/MS 10 0 1 1 39.25 38.757 2 0.043033 43591 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 50.353 21.192 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56001 2239 50333 471454 374280 374280 1 VGSHEQPSGATLQR Unmodified 1465.7274 0.72735397 3035 Q765P7 MTSS1L MTSS1-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 1 2 1 2 2 2 1 1 1 2 2 18.921 19.126 2;3 0.001253 18917 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 37.366 29.822 192060000 0 0 0 14576000 11909000 17499000 12019000 11400000 10358000 21221000 18313000 16779000 17610000 11534000 28845000 56002 3035 50334 471455;471456;471457;471458;471459;471460;471461;471462;471463;471464;471465;471466;471467;471468;471469;471470;471471;471472 374281;374282;374283;374284;374285;374286;374287;374288;374289 374288 6 VGSHPELLPSIAPSQNLVSK Unmodified 2072.1266 0.12660408 2433 Q14686 NCOA6 Nuclear receptor coactivator 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78.159 77.447 3 7.145E-10 98926 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.283 82.312 193780000 44164000 0 4505400 4406900 5822200 9543000 7045900 11583000 10453000 11866000 15245000 14345000 12733000 15826000 26237000 56003 2433 50335 471473;471474;471475;471476;471477;471478;471479;471480;471481;471482;471483;471484;471485;471486 374290;374291;374292;374293;374294;374295;374296;374297;374298;374299;374300;374301;374302;374303;374304 374295 14 VGSIFLQLK Unmodified 1003.6066 0.60661712 3176 Q86VX2 COMMD7 COMM domain-containing protein 7 yes yes 0 0 0 By MS/MS 2 0 1 1 86.907 78.776 2 0.025402 102582 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.525 47.634 16505000 16505000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56004 3176 50336 471487 374305 374305 1 VGSLDNVGHLPAGGAVK Unmodified 1589.8526 0.85255449 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.39 3.7 10 2 24 3 5 4 2 2 2 2 2 2 2 2 2 2 2 2 58.856 56.717 2;3 1.3409E-208 74544 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 314.18 267.85 4611800000 1294300000 1966000000 720590000 77247000 82274000 58977000 100110000 87164000 51465000 110930000 12432000 14811000 8931000 11680000 14979000 56005 1226 50337 471488;471489;471490;471491;471492;471493;471494;471495;471496;471497;471498;471499;471500;471501;471502;471503;471504;471505;471506;471507;471508;471509;471510;471511;471512;471513;471514;471515;471516;471517;471518;471519;471520;471521;471522;471523 374306;374307;374308;374309;374310;374311;374312;374313;374314;374315;374316;374317;374318;374319;374320;374321;374322;374323;374324;374325;374326;374327;374328;374329;374330;374331;374332;374333;374334;374335;374336;374337;374338 374313 29 VGSLPLEK Unmodified 841.49092 0.49091866 3071 Q7Z2K8 GPRIN1 G protein-regulated inducer of neurite outgrowth 1 yes yes 0 0 0 By MS/MS 2 0 1 1 47.317 41.754 2 0.029412 54420 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.774 25.808 8561000 0 8561000 0 0 0 0 0 0 0 0 0 0 0 0 0 56006 3071 50338 471524 374339 374339 1 VGSLTPPSSPK Unmodified 1068.5815 0.58152458 2651 Q2M2I8 AAK1 AP2-associated protein kinase 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36.872 36.004 2 0.0015109 39461 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 72.243 48.475 128090000 4820600 48535000 2168500 4432500 3277400 5002400 5407300 3877100 6092100 7967400 6873800 6735500 5544900 6515000 10838000 56007 2651 50339 471525;471526;471527;471528;471529;471530;471531;471532;471533;471534;471535;471536;471537;471538;471539 374340;374341;374342;374343;374344;374345;374346;374347;374348;374349;374350;374351;374352 374350 12 VGSLYPEMSAHER Unmodified 1474.6875 0.68746299 2391 Q14203 DCTN1 Dynactin subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 45.735 45.906 3 0.0036162 50266 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.787 18.031 91530000 0 0 0 7254500 4631600 8690800 6228000 0 0 9668000 10930000 8539400 7660800 8473900 19452000 56008 2391 50340 471540;471541;471542;471543;471544;471545;471546;471547;471548;471549 374353;374354;374355;374356;374357;374358;374359;374360;374361 374356 9 VGSPATVTFQQNK Unmodified 1375.7096 0.70957864 2195 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 43.631 42.814 2 4.3307E-18 54431 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.28 112.97 162000000 0 72537000 0 10781000 5329300 12071000 8857900 7399300 6343500 8449800 12789000 0 8398100 9042800 0 56009 2195 50341 471550;471551;471552;471553;471554;471555;471556;471557;471558;471559;471560;471561;471562;471563 374362;374363;374364;374365;374366;374367;374368;374369;374370;374371;374372 374365 11 VGSPFELVVSGNK Unmodified 1331.7085 0.70851601 2995 Q6YHK3 CD109 CD109 antigen yes yes 0 0 0 By MS/MS 2 0 1 1 82.183 79.693 2 0.0028822 96663 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 100.88 74.494 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56010 2995 50342 471564 374373 374373 1 VGSPQPSSSGGEK Unmodified 1215.5731 0.57314474 580 O94761 RECQL4 ATP-dependent DNA helicase Q4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 8.2334 8.3879 2 9.6948E-13 5947 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 131.82 100.75 51774000 0 0 0 2925300 0 3535500 0 2404700 4732500 5949400 15252000 9701300 0 0 7273200 56011 580 50343 471565;471566;471567;471568;471569;471570;471571;471572;471573;471574 374374;374375;374376;374377;374378;374379;374380;374381 374378 8 VGSSNFR Unmodified 765.37695 0.37695154 67 CON__P05787;P05787 KRT8 Keratin, type II cytoskeletal 8 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 12.064 12.203 2 0.011651 11138 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 150.02 125.02 + 2251900000 0 0 0 136970000 164050000 274330000 169150000 165630000 129390000 244890000 214180000 290860000 216020000 0 246370000 56012 67 50344 471575;471576;471577;471578;471579;471580;471581;471582;471583;471584;471585 374382;374383;374384;374385;374386;374387;374388;374389;374390 374385 5 VGSSSSESCAQDLPVLVGEEGEVK Unmodified 2462.1483 0.14826332 4030 Q99590 SCAF11 Protein SCAF11 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 78.098 78.172 3 0.00066399 90231 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 31.27 22.776 59507000 0 0 0 0 7026000 0 7949500 6909500 0 8511600 0 9907100 10026000 9176500 0 56013 4030 50345 471586;471587;471588;471589;471590;471591;471592 374391;374392;374393;374394 374391 4 VGSTAVQVTSAER Unmodified 1303.6732 0.67319314 1125 P21359 NF1 Neurofibromin;Neurofibromin truncated yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 31.742 31.897 2 0.0027514 35194 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 68.069 52.918 9308600 0 0 0 0 0 5006600 0 0 0 0 0 0 0 4301900 0 56014 1125 50346 471593;471594;471595;471596;471597 374395;374396;374397;374398;374399;374400;374401 374395 7 VGSTAVQVTSAERTK Unmodified 1532.8158 0.81583463 1125 P21359 NF1 Neurofibromin;Neurofibromin truncated yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 33.239 27.203 3 1.1235E-56 38149 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 170.11 153.58 30051000 30051000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56015 1125 50347 471598;471599;471600 374402;374403;374404;374405;374406 374404 5 VGSTENIK Unmodified 846.4447 0.44469675 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 3.8 3.12 3 1 1 1 2 1 1 11.088 8.5871 2 0.010724 11484 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 111.65 45.751 552860000 30458000 499140000 5303800 0 0 0 0 0 0 0 17965000 0 0 0 0 56016 1226 50348 471601;471602;471603;471604;471605 374407;374408;374409;374410 374408 4 VGSTSENITQK Unmodified 1162.583 0.58298115 170 O00571;O15523 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.045 15.216 2 4.3129E-37 13767 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 182.65 128.1 1210900000 0 0 0 70505000 51013000 77867000 77028000 60948000 58400000 108720000 156770000 130930000 137630000 119980000 161120000 56017 170 50349 471606;471607;471608;471609;471610;471611;471612;471613;471614;471615;471616;471617 374411;374412;374413;374414;374415;374416;374417;374418;374419;374420;374421;374422;374423;374424;374425;374426 374421 16 VGSVEEFQGQER Unmodified 1363.6368 0.63680763 4513 Q9HCE1 MOV10 Putative helicase MOV-10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 37.021 36.871 2 2.0568E-05 40711 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 104.22 80.868 6877300 0 0 0 0 2687800 0 0 4189500 0 0 0 0 0 0 0 56018 4513 50350 471618;471619;471620;471621;471622 374427;374428;374429;374430;374431 374428 5 VGSYMEQHGVK Unmodified 1233.5812 0.58120701 3172 Q86VQ6 TXNRD3 Thioredoxin reductase 3 yes yes 0 0 0 By MS/MS 2 0 1 1 28.847 23.328 3 0.0014795 32884 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.744 68.089 26563000 26563000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56019 3172 50351 471623 374432 374432 1 VGTAQLALVAR Unmodified 1097.6557 0.65569258 4916 Q9UI10 EIF2B4 Translation initiation factor eIF-2B subunit delta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.145 62.244 2 1.9224E-06 71212 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 143.73 83.144 104740000 0 0 0 4990700 6686700 6589400 6748900 7285000 4455500 10482000 9698600 12371000 9414900 10251000 15762000 56020 4916 50352 471624;471625;471626;471627;471628;471629;471630;471631;471632;471633;471634;471635 374433;374434;374435;374436;374437;374438;374439;374440;374441;374442;374443;374444;374445;374446;374447 374433 15 VGTASENVYVNIAHLK Unmodified 1713.905 0.90498399 1722 P53634 CTSC Dipeptidyl peptidase 1;Dipeptidyl peptidase 1 exclusion domain chain;Dipeptidyl peptidase 1 heavy chain;Dipeptidyl peptidase 1 light chain yes yes 0 0 0 By MS/MS 2 0 1 1 79.197 71.066 3 1.8638E-05 93401 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.854 87.32 19470000 19470000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56021 1722 50353 471636 374448 374448 1 VGTASVLQPVK Unmodified 1097.6445 0.64445919 2656 Q2TAL8 QRICH1 Glutamine-rich protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.787 47.95 2 4.3093E-11 53797 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 155.07 88.386 200940000 0 0 0 9784400 10203000 14945000 14542000 10580000 10790000 25721000 22238000 19031000 20037000 15065000 28000000 56022 2656 50354 471637;471638;471639;471640;471641;471642;471643;471644;471645;471646;471647;471648 374449;374450;374451;374452;374453;374454;374455;374456;374457 374450 9 VGTASVLQPVKK Unmodified 1225.7394 0.73942221 2656 Q2TAL8 QRICH1 Glutamine-rich protein 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching 10 0 8 1 1 1 1 1 1 1 1 36.076 36.326 3 0.049151 40221 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 17.211 4.635 17204000 0 0 0 0 1616400 0 2792700 1951200 1021200 0 0 2738500 2028000 2513100 2543200 56023 2656 50355 471649;471650;471651;471652;471653;471654;471655;471656 374458 374458 1 VGTDLLEEEITK Unmodified 1345.6977 0.69767655 1255 P29692 EEF1D Elongation factor 1-delta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.67 3.86 7 2 12 3 5 1 1 1 1 1 1 1 1 1 1 1 1 1 75.907 74.399 2 9.5794E-32 94065 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 205.18 171.8 8908100000 140860000 7453900000 145140000 31684000 28601000 119200000 42817000 37470000 62681000 95234000 120460000 121340000 58720000 111500000 338540000 56024 1255 50356 471657;471658;471659;471660;471661;471662;471663;471664;471665;471666;471667;471668;471669;471670;471671;471672;471673;471674;471675;471676;471677 374459;374460;374461;374462;374463;374464;374465;374466;374467;374468;374469;374470;374471;374472;374473;374474;374475;374476;374477 374469 18 VGTDLLEEEITKFEEHVQSVDIAAFNK Unmodified 3060.5292 0.52916125 1255 P29692 EEF1D Elongation factor 1-delta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.4 0.663 1 4 5 4 5 1 100.93 97.756 3;4 0 95798 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 307.34 288.73 721560000 415870000 302950000 2742100 0 0 0 0 0 0 0 0 0 0 0 0 56025 1255 50357 471678;471679;471680;471681;471682;471683;471684;471685;471686;471687 374478;374479;374480;374481;374482;374483;374484;374485;374486;374487 374486 10 VGTDMLEEQITAFEDYVQSMDVAAFNK 2 Oxidation (M) 3082.3787 0.37873354 1174 P24534 EEF1B2 Elongation factor 1-beta yes yes 0 2 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 99.89 95.221 3 2.3849E-78 118657 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 130.83 128.45 146370000 12978000 126500000 6891400 0 0 0 0 0 0 0 0 0 0 0 0 56026 1174 50358 471688;471689;471690;471691 374488;374489;374490;374491;374492 374491 1702;1703 5 VGTDMLEEQITAFEDYVQSMDVAAFNK Oxidation (M) 3066.3838 0.38381892 1174 P24534 EEF1B2 Elongation factor 1-beta yes yes 0 1 0 By MS/MS By MS/MS 2.2 0.4 4 1 4 1 102.12 98.095 3 5.3582E-121 121703 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 153.1 150.99 267200000 0 265410000 1794700 0 0 0 0 0 0 0 0 0 0 0 0 56027 1174 50358 471692;471693;471694;471695;471696 374493;374494;374495;374496;374497 374495 1702;1703 5 VGTDMLEEQITAFEDYVQSMDVAAFNK Unmodified 3050.3889 0.3889043 1174 P24534 EEF1B2 Elongation factor 1-beta yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 103.76 99.573 3 3.8226E-90 119639 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 135.58 132.3 102710000 0 102710000 0 0 0 0 0 0 0 0 0 0 0 0 0 56028 1174 50358 471697;471698 374498;374499;374500 374499 3 VGTDMLEEQITAFEDYVQSMDVAAFNKI Unmodified 3163.473 0.47296828 1174 P24534 EEF1B2 Elongation factor 1-beta yes yes 0 0 1 By MS/MS 3 0 1 1 104.29 100.64 3 0.01024 121047 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 23.054 20.916 2043100 0 2043100 0 0 0 0 0 0 0 0 0 0 0 0 0 56029 1174 50359 471699 374501 374501 1 VGTECGNQK Unmodified 991.43929 0.4392938 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS 1.5 0.5 1 1 2 54.37 55.354 2 0.00036912 1902 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 126.28 98.753 69795000 69795000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56030 1124 50360 471700;471701 374502;374503;374504;374505;374506 374505 5 VGTFFSEVK Unmodified 1012.5229 0.52294707 1749 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 6.44 3.98 4 5 2 1 1 1 1 1 1 1 66.872 64.01 2 0.0041866 86763 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 114.5 78.312 231380000 64474000 99050000 31372000 0 4323700 11309000 4683800 0 6319700 0 0 9848600 0 0 0 56031 1749 50361 471702;471703;471704;471705;471706;471707;471708;471709;471710 374507;374508;374509 374507 3 VGTGEPCCDWVGDEGAGHFVK Unmodified 2275.9627 0.96265158 1680 P52209 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 2 3 1 73.449 68.348 2;3 3.4526E-82 86868 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 148.57 146.74 942670000 50770000 760190000 131720000 0 0 0 0 0 0 0 0 0 0 0 0 56032 1680 50362 471711;471712;471713;471714;471715;471716 374510;374511;374512;374513;374514 374511 5 VGTHGGTLSSYIVK Unmodified 1417.7565 0.75652884 4693 Q9NW82 WDR70 WD repeat-containing protein 70 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 51.062 51.278 3 6.0963E-08 56596 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.789 62.644 286150000 0 0 0 0 14348000 19356000 23493000 25247000 16554000 29912000 29679000 31575000 0 31956000 64026000 56033 4693 50363 471717;471718;471719;471720;471721;471722;471723;471724;471725;471726;471727 374515;374516;374517;374518;374519;374520;374521;374522;374523;374524;374525;374526;374527;374528 374518 14 VGTIDDDPEYRK Unmodified 1406.6678 0.66777341 4267 Q9BZI7 UPF3B Regulator of nonsense transcripts 3B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.56 3 2 1 13 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 28.881 28.048 2;3 0.00028598 30186 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 62.14 43.409 183690000 10513000 17207000 3046400 8067600 12206000 14669000 10222000 9833600 9685300 15489000 17162000 15940000 17322000 0 22325000 56034 4267 50364 471728;471729;471730;471731;471732;471733;471734;471735;471736;471737;471738;471739;471740;471741;471742;471743 374529;374530;374531;374532;374533;374534;374535;374536;374537;374538;374539;374540;374541;374542;374543 374533 15 VGTLDVLVGLSDELAK Unmodified 1627.9033 0.90325265 1122 P21283 ATP6V1C1 V-type proton ATPase subunit C 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 1 3 2 99.079 94.776 2;3 0.0011328 117773 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 52.372 45.539 177470000 27338000 138810000 11323000 0 0 0 0 0 0 0 0 0 0 0 0 56035 1122 50365 471744;471745;471746;471747;471748;471749 374544;374545;374546;374547;374548;374549 374545 5 VGTPMSLTGQR Oxidation (M) 1161.5812 0.58120701 2616 Q16594 TAF9 Transcription initiation factor TFIID subunit 9 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 30.356 30.562 2 0.01404 33286 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 42.348 21.723 62530000 0 0 0 2315300 3152200 0 4600600 3766100 3352400 5232600 7861300 9096700 6762000 7005000 9386000 56036 2616 50366 471750;471751;471752;471753;471754;471755;471756;471757;471758;471759;471760 374550 374550 4274 1 VGTQFIR Unmodified 819.46029 0.46028724 5039 Q9UNQ0 ABCG2 ATP-binding cassette sub-family G member 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 37.292 37.543 2 0.032282 41157 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.039 31.537 58202000 0 0 0 0 3912100 5922100 5728800 4146800 0 4958600 6998200 5384400 6393300 4968800 9789000 56037 5039 50367 471761;471762;471763;471764;471765;471766;471767;471768;471769;471770 374551 374551 1 VGTSFSIPVVSDVR Unmodified 1461.7827 0.78274359 3694 Q92979 EMG1 Ribosomal RNA small subunit methyltransferase NEP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 83.513 83.598 2 0.0018609 97087 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 54.286 42.002 57458000 0 0 0 0 2042800 4917700 4054400 5310400 4041100 10138000 0 11062000 5630900 10261000 0 56038 3694 50368 471771;471772;471773;471774;471775;471776;471777;471778;471779 374552;374553;374554;374555;374556;374557;374558;374559 374557 6 VGTVIGSNK Unmodified 873.49198 0.4919813 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 17.942 18.167 2 0.0031624 17908 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 92.491 38.812 146100000 0 0 0 7873400 0 13252000 10856000 8594900 7493800 14508000 21355000 18731000 13448000 11281000 18709000 56039 894 50369 471780;471781;471782;471783;471784;471785;471786;471787;471788;471789;471790 374560;374561;374562;374563;374564;374565 374562 6 VGTVTMGPSAR Unmodified 1074.5492 0.5491786 4461 Q9H944 MED20 Mediator of RNA polymerase II transcription subunit 20 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 31.751 31.632 2 0.027385 34371 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 39.873 15.054 15282000 0 0 0 2559700 2523700 2637300 2992300 4568800 0 0 0 0 0 0 0 56040 4461 50370 471791;471792;471793;471794;471795 374566 374566 1 VGTVTMGPSAR Oxidation (M) 1090.5441 0.54409322 4461 Q9H944 MED20 Mediator of RNA polymerase II transcription subunit 20 yes yes 0 1 0 By MS/MS 10 0 1 1 17.26 17.814 2 0.04949 17542 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 45.368 17.194 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56041 4461 50370 471796 374567 374567 1 VGTVVTPDNDIYIAGGQVPLK Unmodified 2155.1525 0.15248448 3274 Q8IY47 KBTBD2 Kelch repeat and BTB domain-containing protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 86.322 81.548 2 2.973E-47 101313 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.2 114.26 77975000 0 77975000 0 0 0 0 0 0 0 0 0 0 0 0 0 56042 3274 50371 471797 374568 374568 1 VGTYQLAIVAK Unmodified 1161.6758 0.67575932 4172 Q9BV20 MRI1 Methylthioribose-1-phosphate isomerase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.64 2.9 1 1 9 1 1 1 1 1 1 1 1 1 1 1 68.76 67.732 2 0.00074398 88965 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 112.84 76.395 337780000 251740000 9796400 0 0 2314500 4739700 0 4363200 0 5958300 12661000 11135000 4113200 8205300 22759000 56043 4172 50372 471798;471799;471800;471801;471802;471803;471804;471805;471806;471807;471808 374569;374570;374571;374572;374573;374574 374572 3 VGVAAPPFLGSPVPFGGFR Unmodified 1871.0094 0.0093894799 4113 Q9BRQ0 PYGO2 Pygopus homolog 2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 96.095 96.231 2 0.00076646 111631 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.616 39.3 7933400 0 0 0 0 0 0 0 0 0 1346400 0 0 0 0 6586900 56044 4113 50373 471809;471810 374575 374575 1 VGVAFDHMK Oxidation (M) 1018.4906 0.49060109 4086 Q9BQ52 ELAC2 Zinc phosphodiesterase ELAC protein 2 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 31.332 26.738 2 0.0050076 33775 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 107.29 85.613 96854000 63368000 0 33486000 0 0 0 0 0 0 0 0 0 0 0 0 56045 4086 50374 471811;471812 374576;374577;374578;374579 374579 5591 4 VGVAFDHMK Unmodified 1002.4957 0.49568646 4086 Q9BQ52 ELAC2 Zinc phosphodiesterase ELAC protein 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 47.424 41.566 2 0.0040775 58163 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 132.57 112.01 76415000 66469000 0 9945800 0 0 0 0 0 0 0 0 0 0 0 0 56046 4086 50374 471813;471814 374580;374581 374580 1 VGVASSEELAR Unmodified 1116.5775 0.57750184 683 O95721 SNAP29 Synaptosomal-associated protein 29 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.869 36.049 2 3.7563E-05 39215 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 126.07 93.227 260810000 0 0 0 15535000 15643000 14762000 15573000 17034000 13674000 26907000 31978000 32494000 22832000 22355000 32024000 56047 683 50375 471815;471816;471817;471818;471819;471820;471821;471822;471823;471824;471825;471826 374582;374583;374584;374585;374586;374587;374588;374589;374590;374591;374592;374593 374587 11 VGVDPLIIPTDYWK Unmodified 1614.8657 0.86574494 4578 Q9NQW7 XPNPEP1 Xaa-Pro aminopeptidase 1 yes yes 0 0 0 By MS/MS 10 0 1 1 92.988 93.126 2 0.0015654 107943 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.203 38.423 3979500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3979500 56048 4578 50376 471827 374594 374594 1 VGVESTLER Unmodified 988.51892 0.51892433 329 O43432 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 35.309 35.462 2 0.0052017 38542 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 80.455 52.968 78774000 0 0 0 3284100 5055300 5208000 4868800 6584700 6380400 0 10445000 17729000 0 0 19219000 56049 329 50377 471828;471829;471830;471831;471832;471833;471834;471835;471836 374595;374596;374597;374598 374598 4 VGVEVPDVNIEGPEGK Unmodified 1636.8308 0.83081599 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 80.461 72.331 2 2.0669E-26 88649 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 136.7 105.28 14614000 14614000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56050 2172 50378 471837;471838 374599;374600 374600 2 VGVGHAGEWAR Unmodified 1137.5679 0.56794021 1246 P29372 MPG DNA-3-methyladenine glycosylase yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.438 31.623 3 0.026975 34381 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 36.447 36.447 120290000 0 0 0 4468700 8006100 9999000 6668400 8675500 7226100 11969000 12879000 23014000 6156000 8425300 12802000 56051 1246 50379 471839;471840;471841;471842;471843;471844;471845;471846;471847;471848;471849;471850 374601;374602;374603;374604;374605;374606;374607 374602 7 VGVGTCGIADK Unmodified 1075.5332 0.53319418 563 O75940 SMNDC1 Survival of motor neuron-related-splicing factor 30 yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 33.093 33.448 2 0.00029015 35584 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.556 75.492 71778000 0 0 0 0 0 7982300 0 0 7372000 5811600 11279000 9680500 7628200 8284700 13739000 56052 563 50380 471851;471852;471853;471854;471855;471856;471857;471858 374608;374609;374610;374611;374612 374608 5 VGVGTCGIADKPMTQYQDTSK Unmodified 2255.0562 0.05621761 563 O75940 SMNDC1 Survival of motor neuron-related-splicing factor 30 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 53.429 53.934 3 3.0946E-28 60292 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 99.86 91.572 31038000 0 0 0 0 0 0 0 0 0 0 0 11943000 0 9485400 9609300 56053 563 50381 471859;471860;471861 374613;374614;374615;374616 374614 3 VGVGTSFGLPQTR Unmodified 1317.7041 0.70409934 1638 P50851 LRBA Lipopolysaccharide-responsive and beige-like anchor protein yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 69.603 69.67 2 0.043258 80005 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 38.634 7.9473 65216000 0 0 0 4073500 3596400 6981400 4953100 4594200 0 7788400 5433600 6069900 4113600 6524700 11087000 56054 1638 50382 471862;471863;471864;471865;471866;471867;471868;471869;471870;471871;471872 374617 374617 1 VGVHIADVSYFVPEGSDLDK Unmodified 2146.0582 0.058249745 3281 Q8IYB7 DIS3L2 DIS3-like exonuclease 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 88.311 83.03 3 3.7531E-14 106024 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.644 58.825 27209000 24210000 0 2999000 0 0 0 0 0 0 0 0 0 0 0 0 56055 3281 50383 471873;471874 374618;374619 374618 2 VGVHLLEPATR Unmodified 1190.6772 0.6771563 4999 Q9ULL5 PRR12 Proline-rich protein 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.492 51.641 3 0.00052934 58226 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 76.927 57.165 183260000 0 0 0 10171000 6669600 19852000 11624000 10780000 13102000 13621000 15577000 24592000 14910000 19119000 23247000 56056 4999 50384 471875;471876;471877;471878;471879;471880;471881;471882;471883;471884;471885;471886 374620;374621;374622;374623;374624;374625;374626;374627;374628;374629;374630;374631 374620 12 VGVIGFPNVGK Unmodified 1085.6233 0.62332982 4195 Q9BVP2 GNL3 Guanine nucleotide-binding protein-like 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.426 75.537 2 0.00028816 86511 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.429 70.715 104540000 0 0 0 0 8432300 9899600 8271100 6029000 9307500 10073000 9287100 13177000 8559900 8059200 13449000 56057 4195 50385 471887;471888;471889;471890;471891;471892;471893;471894;471895;471896;471897;471898 374632;374633;374634;374635;374636;374637;374638;374639;374640;374641;374642;374643 374635 12 VGVKPVGSDPDFQPELSGAGSR Unmodified 2198.0968 0.096760517 324 O43396 TXNL1 Thioredoxin-like protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 65.672 65.44 3 2.0699E-10 75630 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 69.922 62.025 138320000 0 0 4542400 5146100 3479500 3848800 4356400 5789700 0 5756600 18757000 19881000 6670900 13513000 46582000 56058 324 50386 471899;471900;471901;471902;471903;471904;471905;471906;471907;471908;471909;471910 374644;374645;374646;374647;374648;374649;374650;374651;374652;374653;374654;374655;374656;374657 374656 14 VGVLAASMEAK Unmodified 1074.5743 0.57433072 4893 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.9 3.81 3 1 6 1 2 1 1 1 1 1 1 1 54.186 51.336 2 0.00072556 57537 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 77.662 48.501 333540000 132650000 119490000 23600000 0 11773000 13003000 9896900 0 0 0 23131000 0 0 0 0 56059 4893 50387 471911;471912;471913;471914;471915;471916;471917;471918;471919;471920 374658;374659;374660;374661;374662;374663;374664;374665;374666;374667;374668;374669;374670;374671;374672;374673 374670 15 VGVLAASMEAK Oxidation (M) 1090.5692 0.56924534 4893 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS 7.06 3.8 5 1 10 1 3 2 1 1 1 1 1 1 1 1 1 1 36.297 34.68 2 0.0044312 44412 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.345 58.833 242310000 28934000 62699000 30898000 0 5620800 9171700 8753100 6462100 10702000 11130000 11283000 16300000 12131000 0 28230000 56060 4893 50387 471921;471922;471923;471924;471925;471926;471927;471928;471929;471930;471931;471932;471933;471934;471935;471936 374674;374675;374676;374677;374678;374679;374680 374675 6246 7 VGVLTVSDSCFR Unmodified 1338.6602 0.66018561 4579 Q9NQX3 GPHN Gephyrin;Molybdopterin adenylyltransferase;Molybdopterin molybdenumtransferase yes yes 0 0 0 By MS/MS 10 0 1 1 71.281 70.654 2 0.02047 82057 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 52.49 22.722 6713900 0 0 0 6713900 0 0 0 0 0 0 0 0 0 0 0 56061 4579 50388 471937 374681 374681 1 VGVNGFGR Unmodified 804.42424 0.42423608 782 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 34.206 34.398 2 0.0059155 37207 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 126.16 69.646 1971000000 0 0 0 168040000 34792000 0 0 65150000 24100000 0 418880000 341690000 0 0 918370000 56062 782 50389 471938;471939;471940;471941;471942;471943;471944 374682;374683;374684;374685;374686;374687;374688;374689 374686 4 VGVNGLDK Unmodified 800.43922 0.43921744 3678 Q92882 OSTF1 Osteoclast-stimulating factor 1 yes yes 0 0 0 By MS/MS 10 0 1 1 24.595 25.263 2 0.049549 25862 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.082 13.343 14849000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14849000 56063 3678 50390 471945 374690 374690 1 VGVPTVDLDAQGR Unmodified 1325.6939 0.69392858 393 O60306 AQR Intron-binding protein aquarius yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 64.981 65.026 2 0.002054 74179 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 60.434 43.408 94841000 0 0 0 4963000 5344100 7222100 7915300 7883600 5933300 7698500 10936000 17364000 7737100 11844000 0 56064 393 50391 471946;471947;471948;471949;471950;471951;471952;471953;471954;471955;471956 374691;374692;374693;374694;374695;374696;374697;374698;374699;374700;374701;374702 374693 12 VGVSEAGLQHEILR Unmodified 1506.8154 0.8154407 2979 Q6UWE0 LRSAM1 E3 ubiquitin-protein ligase LRSAM1 yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 65.065 64.982 3 0.03923 74343 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 28.283 18.231 9281600 0 0 0 0 1702600 0 2589400 0 0 4989500 0 0 0 0 0 56065 2979 50392 471957;471958;471959 374703 374703 1 VGVVGLPNVGK Unmodified 1037.6233 0.62332982 4674 Q9NVN8 GNL3L Guanine nucleotide-binding protein-like 3-like protein yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching 10 0 5 1 1 1 1 1 65.858 65.915 2 0.020754 75669 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 62.546 30.612 30374000 0 0 0 0 7518500 0 3922300 7111000 2730900 0 9091600 0 0 0 0 56066 4674 50393 471960;471961;471962;471963;471964 374704 374704 0 VGWEQLLTTIAR Unmodified 1385.7667 0.76669959 356;971 O43707;P12814 ACTN4;ACTN1 Alpha-actinin-4;Alpha-actinin-1 no no 0 0 0 By matching By MS/MS 10 0 2 1 1 96.185 96.356 2 2.3636E-05 111803 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 102.06 94.136 10820000 0 0 0 0 0 0 0 0 0 0 2074200 0 0 0 8745700 56067 356;971 50394 471965;471966 374705 374705 1 VGWIFTDLVSEDTR Unmodified 1636.8097 0.80968662 3476 Q8TAT6 NPLOC4 Nuclear protein localization protein 4 homolog yes yes 0 0 0 By MS/MS 10 0 1 1 32.459 33.186 3 0.040834 35539 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 19.604 4.217 34434000 0 0 0 0 0 0 0 0 0 0 0 34434000 0 0 0 56068 3476 50395 471967 374706 374706 1 VGWIFTDLVSEDTRK Unmodified 1764.9046 0.90464964 3476 Q8TAT6 NPLOC4 Nuclear protein localization protein 4 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 6 2 3 4 1 82.838 77.837 3 0.0037416 96522 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 50.563 41.964 2249400000 488120000 1465700000 295630000 0 0 0 0 0 0 0 0 0 0 0 0 56069 3476 50396 471968;471969;471970;471971;471972;471973;471974;471975 374707;374708;374709;374710;374711;374712;374713 374707 5 VGWSTMQASLDLGTDK Oxidation (M) 1723.8087 0.80870034 3608 Q92499 DDX1 ATP-dependent RNA helicase DDX1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 72.711 72.692 2 1.0917E-19 83768 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 108.72 92.579 42777000 0 0 0 6589700 4598700 5046400 6428400 3060800 3595400 6835100 6622800 0 0 0 0 56070 3608 50397 471976;471977;471978;471979;471980;471981;471982;471983;471984;471985 374714;374715;374716;374717;374718;374719;374720;374721;374722 374715 5103 9 VGWVLGPDHIMK Oxidation (M) 1366.7067 0.70674187 2633 Q16773 CCBL1 Kynurenine--oxoglutarate transaminase 1 yes yes 0 1 0 By MS/MS By matching 2 0 2 1 1 74.687 69.079 3 0.0044175 90695 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.98 46.492 16696000 15222000 0 1474500 0 0 0 0 0 0 0 0 0 0 0 0 56071 2633 50398 471986;471987 374723 374723 4287 1 VGWVLGPDHIMK Unmodified 1350.7118 0.71182725 2633 Q16773 CCBL1 Kynurenine--oxoglutarate transaminase 1 yes yes 0 0 0 By MS/MS 2 0 1 1 83.954 75.823 3 0.029374 99170 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 31.348 22.948 5954200 5954200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56072 2633 50398 471988 374724 374724 1 VGYELKDEIER Unmodified 1349.6827 0.68269519 3579 Q8WWY3 PRPF31 U4/U6 small nuclear ribonucleoprotein Prp31 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 49.191 49.349 3 0.018367 54982 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 46.592 36.905 135500000 0 0 0 6901600 6892600 12084000 12749000 8099800 0 9920000 22105000 20901000 12353000 10885000 12610000 56073 3579 50399 471989;471990;471991;471992;471993;471994;471995;471996;471997;471998;471999 374725;374726 374726 1 VGYLTGLPTTNSR Unmodified 1377.7252 0.72522871 3645 Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 74.326 74.461 2 0.028895 85530 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 35.224 0 42327000 0 0 0 0 0 6308500 8377500 0 7775500 0 19866000 0 0 0 0 56074 3645 50400 472000;472001;472002;472003 374727 374727 1 VGYTPDWIFLLR Unmodified 1478.7922 0.79218606 2040;1723 P53675;Q00610 CLTCL1;CLTC Clathrin heavy chain 2;Clathrin heavy chain 1 no no 0 0 0 By MS/MS 10 0 1 1 97.542 97.705 2 0.031114 113430 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.462 39.437 1308900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1308900 56075 1723;2040 50401 472004 374728 374728 1 VGYVSGWGR Unmodified 979.48756 0.48756462 735 P00738 HP Haptoglobin;Haptoglobin alpha chain;Haptoglobin beta chain yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 50.399 50.166 2 0.011979 57394 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 61.999 47.842 15667000 0 0 0 9285300 0 0 0 6381400 0 0 0 0 0 0 0 56076 735 50402 472005;472006 374729 374729 1 VGYYTIPSMDDLAK Oxidation (M) 1587.7491 0.7490602 1707 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 17 1 2 1 1 2 1 2 2 2 2 1 70.488 70.564 2 0.00092343 81083 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 58.699 52.595 380730000 0 0 0 12700000 35091000 19185000 21086000 0 54275000 27665000 46020000 69813000 39246000 35755000 19891000 56077 1707 50403 472007;472008;472009;472010;472011;472012;472013;472014;472015;472016;472017;472018;472019;472020;472021;472022;472023 374730;374731;374732;374733;374734;374735;374736;374737;374738;374739;374740;374741;374742 374738 2758 10 VGYYTIPSMDDLAK Unmodified 1571.7541 0.75414558 1707 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82.688 82.225 2 0.00035049 95255 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 76.682 65.852 489310000 0 179550000 1256100 4505100 7960400 15199000 10479000 24995000 15542000 30452000 23548000 28234000 15177000 37364000 95053000 56078 1707 50403 472024;472025;472026;472027;472028;472029;472030;472031;472032;472033;472034;472035;472036;472037 374743;374744;374745;374746;374747;374748;374749;374750;374751;374752;374753;374754;374755 374744 13 VGYYVNNEYLNPELR Unmodified 1841.8948 0.89481323 4676 Q9NVP2 ASF1B Histone chaperone ASF1B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.547 77.605 2 1.0644E-23 89610 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 124.1 112.89 94183000 0 0 0 3064300 4319500 9625400 2986100 4331400 5514200 14554000 7614600 11077000 9258000 7739800 14100000 56079 4676 50404 472038;472039;472040;472041;472042;472043;472044;472045;472046;472047;472048;472049 374756;374757;374758;374759;374760;374761;374762;374763;374764;374765;374766;374767 374756 12 VGYYVNNEYTETELR Unmodified 1848.853 0.853008 5091 Q9Y294 ASF1A Histone chaperone ASF1A yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 66.482 66.504 2 5.9895E-05 75690 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 103.34 87.088 9324500 0 0 0 0 2066100 0 2293300 0 0 0 0 4965100 0 0 0 56080 5091 50405 472050;472051;472052;472053;472054 374768;374769;374770 374769 3 VHAASVNPIDVNMR Unmodified 1521.7722 0.77219568 3577 Q8WWV3 RTN4IP1 Reticulon-4-interacting protein 1, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 54.544 54.564 3 0.040438 62098 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 36.445 31.367 25105000 0 0 0 0 3478200 4491200 3385000 6172600 3133500 4445000 0 0 0 0 0 56081 3577 50406 472055;472056;472057;472058;472059;472060 374771 374771 0 VHADLVISK Unmodified 980.56548 0.56548059 2688 Q4LE39 ARID4B AT-rich interactive domain-containing protein 4B yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 41.846 36.675 2 0.00039865 50649 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 125.82 68.006 50402000 36037000 0 14365000 0 0 0 0 0 0 0 0 0 0 0 0 56082 2688 50407 472061;472062 374772;374773 374772 2 VHADVVRPHGYAEK Unmodified 1576.811 0.81102402 457 O75128 COBL Protein cordon-bleu yes yes 0 0 1 By matching By matching By matching By matching By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 22.193 22.495 3 0.020746 23659 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 31.656 22.767 25082000 0 0 0 0 0 1561600 0 1481100 1973400 2871800 0 7037800 3011200 0 7144800 56083 457 50408 472063;472064;472065;472066;472067;472068;472069 374774 374774 1 VHAELADVLTEAVVDSILAIK Unmodified 2205.2256 0.22564942 1410 P40227 CCT6A T-complex protein 1 subunit zeta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.3 0.64 1 5 4 3 6 1 106.04 102.62 2;3 1.7021E-99 125729 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 167.99 157.85 502560000 372640000 125120000 4799500 0 0 0 0 0 0 0 0 0 0 0 0 56084 1410 50409 472070;472071;472072;472073;472074;472075;472076;472077;472078;472079 374775;374776;374777;374778;374779;374780;374781;374782;374783;374784 374782 9 VHAIPLR Unmodified 804.49701 0.49700709 1921 P62873;P16520 GNB1;GNB3 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1;Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 29.063 29.28 2 0.02563 31527 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 80.377 60.531 117360000 0 0 0 7665800 3693200 0 5188700 15734000 0 11986000 20441000 10464000 17672000 9363600 15151000 56085 1921 50410 472080;472081;472082;472083;472084;472085;472086;472087;472088;472089 374785;374786;374787;374788;374789 374785 5 VHAPGLNLSGVGGK Unmodified 1304.7201 0.72008375 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 55.476 54.96 3 1.087E-09 62338 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 76.073 45.183 407210000 28468000 0 0 22686000 19612000 20713000 48333000 38867000 25903000 23522000 24036000 39364000 34708000 32548000 48446000 56086 2172 50411 472090;472091;472092;472093;472094;472095;472096;472097;472098;472099;472100;472101;472102 374790;374791;374792;374793;374794;374795;374796;374797;374798;374799;374800;374801;374802;374803;374804;374805 374793 14 VHATSTYR Unmodified 933.46683 0.46682918 4314 Q9H074 PAIP1 Polyadenylate-binding protein-interacting protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.5351 6.6594 2 0.0065963 4853 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 121.29 102.97 54153000 0 0 0 3060400 3204000 4782100 5911900 4744400 3727000 4120700 4709800 3844700 2697400 4270900 9079600 56087 4314 50412 472103;472104;472105;472106;472107;472108;472109;472110;472111;472112;472113;472114 374806;374807;374808;374809;374810;374811;374812;374813 374810 8 VHAVIGVLMDDTDPLVTVMK 2 Oxidation (M) 2184.117 0.11702695 1875 P62191 PSMC1 26S protease regulatory subunit 4 yes yes 0 2 0 By MS/MS 2 0 1 1 89.34 81.21 3 0.00047659 105310 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 44.577 37.362 23373000 23373000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56088 1875 50413 472115 374814 374814 3037;3038 1 VHAVIGVLMDDTDPLVTVMK Oxidation (M) 2168.1221 0.12211233 1875 P62191 PSMC1 26S protease regulatory subunit 4 yes yes 0 1 0 By MS/MS 2 0 1 1 95.133 87.003 3 5.4023E-05 112423 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.424 54.535 15771000 15771000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56089 1875 50413 472116 374815 374815 3037;3038 1 VHDLALR Unmodified 822.47119 0.47118627 5141 Q9Y383 LUC7L2 Putative RNA-binding protein Luc7-like 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 24.901 25.194 2 0.024006 26999 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 94.777 51.315 174450000 0 0 0 17191000 0 9362000 0 14283000 0 24923000 17970000 24336000 18773000 16719000 30896000 56090 5141 50414 472117;472118;472119;472120;472121;472122;472123;472124;472125 374816;374817 374817 2 VHDSNIYIK Unmodified 1087.5662 0.56620887 5002 Q9ULR3 PPM1H Protein phosphatase 1H yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 31.138 26.618 2 0.0093239 34116 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 87.639 45.243 19990000 8468500 0 11522000 0 0 0 0 0 0 0 0 0 0 0 0 56091 5002 50415 472126;472127 374818;374819;374820 374818 3 VHEDSTSPAVAK Unmodified 1239.6095 0.60953025 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS 7 3.69 1 1 3 2 1 1 1 11.469 10.311 2 0.00042708 13290 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.111 81.517 73400000 0 64185000 0 0 0 0 0 0 0 0 0 2389500 0 2686400 4138800 56092 645 50416 472128;472129;472130;472131;472132 374821;374822;374823 374821 3 VHEENTTIEELEALGESLGK Unmodified 2197.075 0.075022022 4041 Q99633 PRPF18 Pre-mRNA-splicing factor 18 yes yes 0 0 0 By MS/MS 2 0 1 1 97.11 88.98 3 2.8829E-107 114884 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 159.04 150.96 21791000 21791000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56093 4041 50417 472133 374824 374824 1 VHEEVVLK Unmodified 951.53893 0.53893149 602 O94913 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 5.4 3.77 2 1 2 2 1 1 1 27.671 25.561 2 0.017595 32408 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 107.66 48.459 61157000 0 16273000 33186000 0 0 0 0 0 0 0 0 4465700 0 0 7233000 56094 602 50418 472134;472135;472136;472137;472138 374825;374826;374827;374828 374827 3 VHEIFQVDPETEQEITR Unmodified 2069.0065 0.006548526 3666 Q92817 EVPL Envoplakin yes yes 0 0 0 By MS/MS 10 0 1 1 73.444 72.869 3 0.0063707 84524 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 35.176 30.072 4000100 0 0 0 4000100 0 0 0 0 0 0 0 0 0 0 0 56095 3666 50419 472139 374829 374829 1 VHELNEEIGK Unmodified 1166.5932 0.5931519 5141;4557 Q9Y383;Q9NQ29 LUC7L2;LUC7L Putative RNA-binding protein Luc7-like 2;Putative RNA-binding protein Luc7-like 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.43 3.14 5 1 24 3 3 2 2 2 2 2 2 2 2 2 2 2 2 28.075 27.453 2;3 0.0015285 35233 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 98.048 56.344 1461700000 0 186510000 48406000 65101000 98854000 100930000 97097000 77543000 71757000 111910000 127500000 118840000 114480000 108430000 134300000 56096 5141;4557 50420 472140;472141;472142;472143;472144;472145;472146;472147;472148;472149;472150;472151;472152;472153;472154;472155;472156;472157;472158;472159;472160;472161;472162;472163;472164;472165;472166;472167;472168;472169 374830;374831;374832;374833;374834;374835;374836;374837;374838;374839;374840;374841;374842;374843;374844;374845;374846;374847;374848;374849 374841 12 VHELQGNAPSDPDAVSAEEALK Unmodified 2276.0921 0.092069069 624 O95163 IKBKAP Elongator complex protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.21 3.66 4 3 12 1 5 1 1 1 1 1 1 1 1 1 1 1 1 1 60.61 58.827 2;3 6.6017E-26 66980 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 92.792 82.238 1147300000 18379000 707690000 9746800 15572000 19498000 37036000 27132000 28900000 19419000 34053000 55194000 53443000 29962000 34639000 56619000 56097 624 50421 472170;472171;472172;472173;472174;472175;472176;472177;472178;472179;472180;472181;472182;472183;472184;472185;472186;472187;472188 374850;374851;374852;374853;374854;374855;374856;374857;374858;374859;374860;374861;374862;374863;374864;374865;374866;374867;374868;374869;374870 374852 20 VHEMEKEHLNK Unmodified 1392.682 0.68198369 1328 P33176 KIF5B Kinesin-1 heavy chain yes yes 0 0 1 By MS/MS 2 0 1 1 23.855 20.939 3 0.040977 26724 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 29.767 4.3304 2983200 0 0 2983200 0 0 0 0 0 0 0 0 0 0 0 0 56098 1328 50422 472189 374871 374871 1 VHEPPREDAAPTK Unmodified 1445.7263 0.72629134 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 11.697 11.879 3 0.0069299 10007 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 43.382 32.457 36781000 0 0 0 0 0 10377000 0 0 7039700 0 0 10821000 0 8544200 0 56099 5262 50423 472190;472191;472192;472193 374872;374873;374874 374873 3 VHEQSGERESELSAVNR Unmodified 1925.9191 0.9191305 2776 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 23.376 23.537 4 0.00075469 24627 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 53.403 43.122 41889000 0 0 0 3911500 2846000 0 5935700 0 4180000 0 8531400 8630400 7854300 0 0 56100 2776 50424 472194;472195;472196;472197;472198;472199;472200 374875;374876;374877;374878;374879;374880 374878 6 VHFNLPEDDK Unmodified 1212.5775 0.57750184 3134 Q86TC9 MYPN Myopalladin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 25 2 3 2 2 2 2 2 2 2 2 2 2 49.089 49.22 2;3 0.00089032 54845 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 135.71 117.73 833590000 0 0 0 40270000 54005000 67386000 65670000 45561000 57597000 60519000 92831000 80496000 85345000 70772000 113140000 56101 3134 50425 472201;472202;472203;472204;472205;472206;472207;472208;472209;472210;472211;472212;472213;472214;472215;472216;472217;472218;472219;472220;472221;472222;472223;472224;472225 374881;374882;374883;374884;374885;374886;374887;374888;374889;374890;374891;374892;374893;374894;374895;374896;374897;374898;374899;374900;374901 374897 12 VHFPDPNK Unmodified 952.47667 0.47666558 3721 Q969M7 UBE2F NEDD8-conjugating enzyme UBE2F yes yes 0 0 0 By MS/MS 2 0 1 1 38.098 31.6 2 0.030523 43923 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 115.69 76.029 49673000 49673000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56102 3721 50426 472226 374902 374902 0 VHGPGIQSGTTNK Unmodified 1294.663 0.6629628 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.47 2 1 14 1 1 1 1 1 1 1 1 1 2 2 2 13.823 13.688 2;3 0.0014612 20762 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.388 41.468 110860000 13166000 0 0 4660700 3489300 3006700 4878200 3825800 8396600 9416700 2068100 0 10360000 12586000 35004000 56103 1124 50427 472227;472228;472229;472230;472231;472232;472233;472234;472235;472236;472237;472238;472239;472240;472241 374903;374904;374905;374906;374907 374906 3 VHGPGIQSGTTNKPNK Unmodified 1633.8536 0.85361712 1124 P21333 FLNA Filamin-A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 28 2 2 2 2 2 2 2 3 3 2 3 3 12.75 12.936 2;3;4 7.5715E-60 12100 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 152.88 116.03 933230000 0 0 0 63055000 48582000 77462000 64519000 44798000 42171000 101860000 70075000 105980000 78286000 74705000 161740000 56104 1124 50428 472242;472243;472244;472245;472246;472247;472248;472249;472250;472251;472252;472253;472254;472255;472256;472257;472258;472259;472260;472261;472262;472263;472264;472265;472266;472267;472268;472269 374908;374909;374910;374911;374912;374913;374914;374915;374916;374917;374918;374919;374920;374921;374922;374923;374924;374925;374926;374927;374928;374929;374930;374931;374932 374909 17 VHGPLSLLAPLPAAGK Unmodified 1539.9137 0.91369818 3382 Q8NAF0 ZNF579 Zinc finger protein 579 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 83.396 83.426 3 0.020695 96768 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 29.733 22.367 14268000 0 0 0 0 341730 2168900 0 0 0 0 0 4234800 0 0 7522700 56105 3382 50429 472270;472271;472272;472273 374933 374933 1 VHGSLGDTPR Unmodified 1037.5254 0.52540669 3912 Q96KQ7 EHMT2 Histone-lysine N-methyltransferase EHMT2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 13.945 14.083 2 0.033145 13217 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 42.19 16.631 22957000 0 0 0 1797100 1672000 1707000 1318000 790690 1021300 2648400 2819000 3961400 2618900 2603000 0 56106 3912 50430 472274;472275;472276;472277;472278;472279;472280;472281;472282;472283;472284 374934 374934 1 VHGSLGDTPRSEETLPK Unmodified 1821.9221 0.92209062 3912 Q96KQ7 EHMT2 Histone-lysine N-methyltransferase EHMT2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 1 2 1 2 2 2 2 2 2 2 35.092 35.283 3;4 0.002112 37975 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 44.312 38.769 284710000 0 0 0 20451000 16164000 10253000 25527000 9738400 19915000 26179000 24960000 28326000 24913000 30644000 47634000 56107 3912 50431 472285;472286;472287;472288;472289;472290;472291;472292;472293;472294;472295;472296;472297;472298;472299;472300;472301;472302;472303;472304;472305;472306 374935;374936;374937;374938;374939;374940;374941 374938 5 VHGSPLELK Unmodified 978.54983 0.54983053 5054 Q9UPQ0 LIMCH1 LIM and calponin homology domains-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 33.59 33.966 2 0.0051384 37283 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 82.426 36.708 89106000 0 0 0 0 0 0 14110000 0 0 0 19992000 0 18237000 16377000 20391000 56108 5054 50432 472307;472308;472309;472310;472311 374942;374943;374944 374944 3 VHIDIGADGR Unmodified 1051.5411 0.54105675 1308 P31942 HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.602 38.843 2 0.0032012 41655 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.355 43.805 95438000 0 0 0 0 3566000 8624100 4281500 4803500 4092600 7784300 10986000 13118000 8090100 5689400 24402000 56109 1308 50433 472312;472313;472314;472315;472316;472317;472318;472319;472320;472321;472322;472323 374945;374946;374947;374948;374949;374950;374951;374952;374953;374954;374955;374956 374948 12 VHIEFTEGEDK Unmodified 1302.6092 0.6091959 2033 Q00341 HDLBP Vigilin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.43 3.64 7 3 20 3 4 3 2 2 2 2 1 2 2 1 1 2 2 1 45.837 44.091 2;3 0.00089671 58970 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.75 112.75 785440000 140970000 122700000 118520000 16388000 14397000 36170000 25746000 11951000 27762000 48358000 40859000 35440000 54931000 35779000 55481000 56110 2033 50434 472324;472325;472326;472327;472328;472329;472330;472331;472332;472333;472334;472335;472336;472337;472338;472339;472340;472341;472342;472343;472344;472345;472346;472347;472348;472349;472350;472351;472352;472353 374957;374958;374959;374960;374961;374962;374963;374964;374965;374966;374967;374968;374969;374970;374971;374972;374973;374974;374975;374976;374977;374978;374979;374980;374981 374965 20 VHIEIGPDGR Unmodified 1091.5724 0.57235688 1692;1309;1773 P55795;P31943;P52597 HNRNPH2;HNRNPH1;HNRNPF Heterogeneous nuclear ribonucleoprotein H2;Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.725 41.901 2 0.00053181 46691 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 133.57 118.91 958700000 0 0 0 48336000 30174000 71147000 46479000 53315000 43795000 90910000 74577000 116980000 104510000 73678000 204800000 56111 1773;1309;1692 50435 472354;472355;472356;472357;472358;472359;472360;472361;472362;472363;472364;472365 374982;374983;374984;374985;374986;374987;374988;374989;374990;374991;374992;374993;374994;374995;374996;374997;374998;374999;375000;375001;375002;375003;375004;375005;375006;375007 374994 26 VHILDTESFETTFGPK Unmodified 1819.8992 0.89922991 2345 Q13823 GNL2 Nucleolar GTP-binding protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 86.691 78.56 3 0.00020642 102361 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.633 75.853 7908400 7908400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56112 2345 50436 472366 375008 375008 1 VHIPNDDAQFDASHCDSDK Unmodified 2169.9022 0.90215981 2615 Q16576 RBBP7 Histone-binding protein RBBP7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 8 2 24 4 4 2 2 2 2 2 2 2 2 2 2 2 2 2 43.687 42.5 3;4 5.9117E-65 53672 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 142.72 142.33 1491700000 75688000 122310000 74101000 29465000 24418000 121630000 29327000 52686000 54070000 81250000 117630000 153660000 87441000 115580000 352470000 56113 2615 50437 472367;472368;472369;472370;472371;472372;472373;472374;472375;472376;472377;472378;472379;472380;472381;472382;472383;472384;472385;472386;472387;472388;472389;472390;472391;472392;472393;472394;472395;472396;472397;472398;472399;472400 375009;375010;375011;375012;375013;375014;375015;375016;375017;375018;375019;375020;375021;375022;375023;375024;375025;375026;375027;375028;375029;375030;375031;375032;375033;375034;375035;375036;375037;375038;375039;375040;375041 375031 24 VHIPNDDAQFDASHCDSDKGEFGGFGSVTGK Unmodified 3293.432 0.43198317 2615 Q16576 RBBP7 Histone-binding protein RBBP7 yes yes 0 0 1 By MS/MS 2 0 1 1 77.202 69.071 4 1.5898E-12 90988 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.706 60.482 16275000 16275000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56114 2615 50438 472401 375042 375042 1 VHLPNGSPIPAVLLANK Unmodified 1739.0094 0.0093894799 2337 Q13637 RAB32 Ras-related protein Rab-32 yes yes 0 0 0 By MS/MS 10 0 1 1 83.616 83.807 3 0.02094 96715 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 19.819 19.819 5625300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5625300 56115 2337 50439 472402 375043 375043 1 VHLPTQPAADTYSEFHK Unmodified 1939.9428 0.94282606 2989 Q6W2J9 BCOR BCL-6 corepressor yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 58.408 58.647 3 0.034407 67279 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 25.179 23.861 18464000 0 0 0 0 0 0 2149200 3919500 3116400 0 0 5417100 3861600 0 0 56116 2989 50440 472403;472404;472405;472406;472407 375044 375044 1 VHLQSEHSK Unmodified 1063.5411 0.54105675 4652 Q9NUQ3 TXLNG Gamma-taxilin yes yes 0 0 0 By MS/MS By MS/MS By matching 2 0 3 1 1 1 6.6035 3.6392 2 0.00094404 5654 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.65 112.41 299140000 250900000 21411000 26833000 0 0 0 0 0 0 0 0 0 0 0 0 56117 4652 50441 472408;472409;472410 375045 375045 1 VHLSTGELGIIDSAFGQSGK Unmodified 2015.0324 0.032369346 1799 P57772 EEFSEC Selenocysteine-specific elongation factor yes yes 0 0 0 By MS/MS 2 0 1 1 90.767 82.636 3 1.3865E-10 107284 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 92.474 83.19 10949000 10949000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56118 1799 50442 472411 375046;375047 375046 2 VHLTPEEK Unmodified 951.50255 0.50254598 1967 P68871;P02042 HBB;HBD Hemoglobin subunit beta;LVV-hemorphin-7;Spinorphin;Hemoglobin subunit delta yes no 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 16.549 16.563 2 0.018283 16419 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 64.567 43.039 10535000 0 0 0 7294600 0 0 0 3240200 0 0 0 0 0 0 0 56119 1967 50443 472412;472413 375048 375048 1 VHLVGIDIFTGK Unmodified 1297.7394 0.73942221 1949 P63241;Q6IS14;Q9GZV4 EIF5A;EIF5AL1;EIF5A2 Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-1-like;Eukaryotic translation initiation factor 5A-2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.77 5 2 11 4 2 1 1 1 1 1 1 1 1 1 1 1 1 85.097 83.466 2;3 1.5568E-05 106628 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.171 71.265 594790000 70143000 67137000 15936000 1963800 0 15188000 4068100 7190900 13899000 14230000 24851000 39180000 5650500 28000000 287350000 56120 1949 50444 472414;472415;472416;472417;472418;472419;472420;472421;472422;472423;472424;472425;472426;472427;472428;472429;472430;472431 375049;375050;375051;375052;375053;375054;375055;375056;375057;375058;375059;375060;375061;375062;375063;375064;375065 375052 16 VHMFEAHSDYIR Unmodified 1503.6929 0.69288272 1358 P35606 COPB2 Coatomer subunit beta' yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 47.244 47.845 3 1.7611E-05 52711 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 101.71 79.666 32709000 0 0 0 0 0 0 0 0 0 0 0 6299300 4358700 0 22051000 56121 1358 50445 472432;472433;472434 375066;375067 375066 2 VHMTWVQPR Unmodified 1152.5862 0.58623281 5036 Q9UNM6 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes yes 0 0 0 By matching By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 47.524 47.7 3 0.0023478 52972 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 78.77 64.563 20765000 0 0 0 0 1313300 1401600 0 0 0 3563300 3772500 10714000 0 0 0 56122 5036 50446 472435;472436;472437;472438;472439 375068 375068 1 VHMWEQTVK Unmodified 1156.5699 0.56991404 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.15 3.37 3 10 2 1 1 1 1 1 1 1 1 1 1 1 39.889 38.381 2;3 0.0051838 54646 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 141.2 109.97 191900000 100380000 33568000 0 3875000 2736100 4973800 3991100 6104900 3323600 7297200 9008300 0 7549900 9090200 0 56123 2431 50447 472440;472441;472442;472443;472444;472445;472446;472447;472448;472449;472450;472451;472452 375069;375070;375071;375072 375071 3 VHMWEQTVK Oxidation (M) 1172.5648 0.56482866 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 1 0 By MS/MS By MS/MS 2 0 5 3 2 29.856 25.182 2;3 0.0043701 35584 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 112.11 92.11 146510000 119010000 0 27499000 0 0 0 0 0 0 0 0 0 0 0 0 56124 2431 50447 472453;472454;472455;472456;472457 375073;375074;375075;375076 375074 4000 2 VHNDAQSFDYDHDAFLGAEEAK Unmodified 2478.0724 0.07239626 376 O43852 CALU Calumenin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 4.36 3.47 6 2 3 3 3 2 1 2 70.154 66.246 3;4 1.9863E-11 86855 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.518 82.756 584450000 268570000 217040000 73025000 0 0 0 0 0 0 0 2510800 0 0 0 23303000 56125 376 50448 472458;472459;472460;472461;472462;472463;472464;472465;472466;472467;472468 375077;375078;375079;375080;375081;375082;375083;375084;375085;375086 375082 9 VHNEGLPAPIVR Unmodified 1300.7252 0.72516913 46 CON__ENSEMBL:ENSBTAP00000024466;CON__ENSEMBL:ENSBTAP00000024462 yes no 0 0 0 By MS/MS 10 0 1 1 50.714 50.777 3 0.0018838 57429 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 51.727 42.312 + 19133000 0 0 0 0 0 0 19133000 0 0 0 0 0 0 0 0 56126 46 50449 472469 375087 375087 1 VHNPFLPTPMLPPPPPPPMAR 2 Oxidation (M) 2334.2017 0.20170006 2199 Q12857 NFIA Nuclear factor 1 A-type yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 83.606 83.762 3 2.6562E-06 96595 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.512 45.052 58221000 0 0 0 0 0 0 0 0 7234300 0 0 11324000 0 6023100 33639000 56127 2199 50450 472470;472471;472472;472473;472474 375088;375089;375090;375091;375092;375093 375089 3568;3569 6 VHPAVVIR Unmodified 889.54977 0.54977095 1913 P62829 RPL23 60S ribosomal protein L23 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.373 29.566 2 0.036964 31188 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 51.572 39.141 868210000 0 0 0 40884000 38279000 38543000 55263000 37126000 35918000 78814000 66179000 174780000 53531000 62901000 186000000 56128 1913 50451 472475;472476;472477;472478;472479;472480;472481;472482;472483;472484;472485;472486 375094 375094 1 VHPEIINENGNPSYK Unmodified 1709.8373 0.83729835 704 O95881 TXNDC12 Thioredoxin domain-containing protein 12 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 6.9 3.81 3 1 6 1 2 1 1 1 1 1 1 1 44.267 42.256 3 7.0634E-15 46790 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 103.14 86.471 816020000 3393000 336210000 386800000 0 3238700 0 0 0 0 0 16143000 18890000 4562500 9320100 37467000 56129 704 50452 472487;472488;472489;472490;472491;472492;472493;472494;472495;472496 375095;375096;375097;375098;375099;375100;375101;375102;375103;375104;375105;375106;375107;375108 375101 14 VHPEPGTWDSFLEK Unmodified 1640.7835 0.78347187 1617 P50225 SULT1A1 Sulfotransferase 1A1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 80.411 76.772 3 0.0003734 95515 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.345 62.187 52942000 0 44494000 8447300 0 0 0 0 0 0 0 0 0 0 0 0 56130 1617 50453 472497;472498 375109;375110 375109 2 VHPETYEWAR Unmodified 1286.6044 0.60438529 3038 Q7KZ85 SUPT6H Transcription elongation factor SPT6 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 40.271 40.543 3 0.027666 43999 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 30.612 20.925 28202000 0 0 0 0 0 2398700 2775100 0 0 6423300 0 0 4752200 3849100 8003400 56131 3038 50454 472499;472500;472501;472502;472503;472504 375111 375111 1 VHPVSTMIK Oxidation (M) 1026.5532 0.55320134 719 P00338 LDHA L-lactate dehydrogenase A chain yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 18.363 18.857 2 0.013778 18028 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.716 44.776 132950000 0 0 0 0 0 0 0 0 0 0 0 26948000 0 20479000 85527000 56132 719 50455 472505;472506;472507 375112 375112 865 1 VHPVSTMIK Unmodified 1010.5583 0.55828672 719 P00338 LDHA L-lactate dehydrogenase A chain yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 29.355 29.937 2 0.0059097 31216 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.478 60.846 323560000 0 0 0 0 0 0 0 0 0 0 45265000 0 0 0 278290000 56133 719 50455 472508;472509 375113;375114 375113 2 VHQIELAPREK Unmodified 1318.7357 0.73573382 5247 Q9Y5S2 CDC42BPB Serine/threonine-protein kinase MRCK beta yes yes 0 0 1 By MS/MS 2 0 1 1 37.485 30.988 3 0.0040912 43054 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.175 40.007 36794000 36794000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56134 5247 50456 472510 375115 375115 1 VHQLEDTASIFSLK Unmodified 1586.8304 0.83042206 2132 Q07002 CDK18 Cyclin-dependent kinase 18 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.692 76.811 3 0.0003259 88326 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 51.643 43.259 48022000 0 0 0 0 1401200 0 2911300 4783200 4255900 4344500 4157400 3779700 4479800 2726700 15182000 56135 2132 50457 472511;472512;472513;472514;472515;472516;472517;472518;472519;472520;472521 375116;375117;375118;375119;375120;375121;375122;375123 375119 7 VHQLEQEQAR Unmodified 1236.6211 0.62109799 4691 Q9NW68 BSDC1 BSD domain-containing protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 10.419 10.5 3 0.010529 9313 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 49.472 31.608 15934000 0 0 0 2018400 1103100 0 2004500 2084800 1158400 2554800 0 0 2777100 2233000 0 56136 4691 50458 472522;472523;472524;472525;472526;472527;472528;472529 375124;375125 375124 2 VHQLEQEQARR Unmodified 1392.7222 0.72220902 4691 Q9NW68 BSDC1 BSD domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 8.0335 8.1605 3 0.021872 5061 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 32.329 15.387 72974000 0 0 0 2367500 2365800 1535800 2548400 5036700 5952700 4385100 17223000 12358000 6849500 4685800 7666000 56137 4691 50459 472530;472531;472532;472533;472534;472535;472536;472537;472538;472539;472540;472541 375126;375127;375128 375127 3 VHQLYETIQR Unmodified 1285.6779 0.67788459 2317 Q13561 DCTN2 Dynactin subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 2 1 1 38.101 38.27 2;3 0.0047104 42550 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.276 40.351 73973000 0 0 0 4938000 3213400 5973900 3699000 4057700 3159700 6606600 7660600 14770000 6063200 0 13830000 56138 2317 50460 472542;472543;472544;472545;472546;472547;472548;472549;472550;472551;472552;472553 375129;375130;375131;375132;375133;375134;375135 375129 7 VHRDGPALSGPQSR Unmodified 1475.7593 0.7593228 1097 P19971 TYMP Thymidine phosphorylase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 15.867 16.137 3 0.0063987 14641 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.983 33.228 28847000 0 0 0 13718000 0 0 0 0 0 0 0 4352900 0 0 10777000 56139 1097 50461 472554;472555;472556 375136;375137 375136 2 VHSAVITVPAYFNDSQR Unmodified 1902.9588 0.95881047 1743 P54652 HSPA2 Heat shock-related 70 kDa protein 2 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 74.334 74.54 3 0.0011708 85326 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.623 42.355 24699000 0 0 0 0 0 0 0 7774700 0 0 0 0 3063400 0 13861000 56140 1743 50462 472557;472558;472559 375138 375138 1 VHSFPTLK Unmodified 927.5178 0.51780212 838 P07237 P4HB Protein disulfide-isomerase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 4 8 2 1 1 1 1 1 1 1 1 1 1 41.779 39.915 2 0.00039749 55507 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 161.68 118.62 1880000000 1145300000 203500000 166260000 0 0 15892000 14586000 16599000 0 23008000 71516000 60775000 22751000 0 139820000 56141 838 50463 472560;472561;472562;472563;472564;472565;472566;472567;472568;472569;472570;472571 375139;375140;375141;375142;375143;375144;375145;375146;375147;375148;375149;375150 375141 7 VHSPSGALEECYVTEIDQDK Unmodified 2276.0267 0.026691621 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.55 3.83 6 3 11 2 5 2 1 1 1 1 1 1 1 1 1 1 1 71.402 69.594 2;3 4.9611E-262 88336 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 319.82 306.4 2756800000 248360000 1571500000 683770000 0 10119000 17936000 8568100 16636000 7598700 22707000 23452000 28172000 9900700 19982000 88049000 56142 1124 50464 472572;472573;472574;472575;472576;472577;472578;472579;472580;472581;472582;472583;472584;472585;472586;472587;472588;472589;472590;472591 375151;375152;375153;375154;375155;375156;375157;375158;375159;375160;375161;375162;375163;375164;375165;375166;375167;375168;375169;375170;375171;375172;375173;375174;375175;375176;375177;375178;375179;375180 375158 29 VHSPSGAVEECHVSELEPDK Unmodified 2205.0008 0.0008112211 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 4.25 3.34 6 3 3 3 4 2 1 2 48.388 44.322 3;4 9.2074E-87 55967 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 158.65 144.49 718940000 79679000 207950000 375810000 0 0 0 0 0 0 0 0 0 0 12071000 43427000 56143 487 50465 472592;472593;472594;472595;472596;472597;472598;472599;472600;472601;472602;472603 375181;375182;375183;375184;375185;375186;375187;375188;375189;375190;375191;375192;375193;375194;375195;375196 375194 13 VHSVSALAK Unmodified 910.52362 0.52361577 3254 Q8IX04 UEVLD Ubiquitin-conjugating enzyme E2 variant 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 22.09 18.233 2 0.030391 26409 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.457 45.902 67720000 46908000 13220000 7591800 0 0 0 0 0 0 0 0 0 0 0 0 56144 3254 50466 472604;472605;472606 375197 375197 1 VHTDQIGLALLK Unmodified 1306.7609 0.76088593 4332 Q9H0K6 PUS7L Pseudouridylate synthase 7 homolog-like protein yes yes 0 0 0 By MS/MS 2 0 1 1 82.932 74.802 3 0.026495 97832 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 37.613 28.546 20652000 20652000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56145 4332 50467 472607 375198 375198 1 VHTQETSEGLDSSSK Unmodified 1603.7326 0.73255851 3423 Q8NEC7 GSTCD Glutathione S-transferase C-terminal domain-containing protein yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 14.05 13.267 3 3.0076E-57 16068 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 141 134.45 97676000 3420500 61016000 1328000 1403700 1639100 3606100 2547100 1287100 0 3084500 2719500 4161100 3335400 2325300 5802100 56146 3423 50468 472608;472609;472610;472611;472612;472613;472614;472615;472616;472617;472618;472619;472620;472621;472622 375199;375200;375201;375202;375203;375204;375205;375206;375207 375201 9 VHTSPNAIIGK Unmodified 1135.635 0.63495714 1146 P22735 TGM1 Protein-glutamine gamma-glutamyltransferase K yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 30.11 30.256 2 6.6596E-05 33161 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 113.18 88.086 78364000 0 0 0 23154000 4279900 5417300 5563900 10456000 0 4406900 3286000 8934100 9680700 3184600 0 56147 1146 50469 472623;472624;472625;472626;472627;472628;472629;472630;472631;472632 375208;375209;375210;375211;375212;375213;375214 375214 7 VHVAEALEEAAAK Unmodified 1336.6987 0.69867961 4208 Q9BWE0 REPIN1 Replication initiator 1 yes yes 0 0 0 By MS/MS 10 0 1 1 51.562 52.267 2 0.025708 58696 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.434 34.495 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56148 4208 50470 472633 375215 375215 1 VHVDCMTSQK Oxidation (M) 1219.5325 0.53254226 1224 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 9.229 6.1426 2 0.035454 8788 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 54.722 40.72 34471000 4680000 24978000 4812900 0 0 0 0 0 0 0 0 0 0 0 0 56149 1224 50471 472634;472635;472636 375216;375217 375216 2 VHVDCMTSQK Unmodified 1203.5376 0.53762763 1224 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 4 3.46 3 1 1 1 1 1 19.988 17.285 2 5.8997E-05 22311 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 161.79 144.83 102050000 44422000 45853000 9023800 0 0 0 0 0 0 0 0 0 0 0 2753100 56150 1224 50471 472637;472638;472639;472640 375218;375219 375219 1 VHVDPSGTFLATSCSDK Unmodified 1819.8411 0.8410631 321 O43379 WDR62 WD repeat-containing protein 62 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 63.918 59.078 3 4.9781E-05 72964 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 86.548 76.748 42099000 0 31611000 10487000 0 0 0 0 0 0 0 0 0 0 0 0 56151 321 50472 472641;472642 375220;375221;375222 375222 3 VHVGDEDFVHLR Unmodified 1421.7052 0.70516197 772 P04080 CSTB Cystatin-B yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 2 57.673 58.017 2;3 1.71E-05 65349 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.401 87.096 135750000 0 0 0 0 0 5388500 0 0 0 0 7463200 0 4523900 8569800 109810000 56152 772 50473 472643;472644;472645;472646;472647;472648 375223;375224;375225;375226 375224 4 VHVIFNYK Unmodified 1018.56 0.56000128 1225 P27797 CALR Calreticulin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.72 2 13 1 1 1 1 1 1 1 1 1 1 1 1 1 2 51.891 51.254 2 7.7418E-94 56953 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 212.65 148.11 1245600000 181490000 0 21918000 15474000 12495000 51932000 30413000 45624000 59853000 48546000 119070000 140530000 77171000 65809000 375300000 56153 1225 50474 472649;472650;472651;472652;472653;472654;472655;472656;472657;472658;472659;472660;472661;472662;472663 375227;375228;375229;375230;375231;375232;375233;375234;375235;375236;375237;375238;375239;375240;375241;375242;375243;375244;375245;375246;375247;375248;375249 375236 23 VHVQTINAK Unmodified 1008.5716 0.5716286 4686 Q9NVX0 HAUS2 HAUS augmin-like complex subunit 2 yes yes 0 0 0 By matching By MS/MS By MS/MS 2 0 3 1 1 1 23.314 19.358 2 0.003411 24452 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 136.8 90.426 118740000 96426000 12744000 9567600 0 0 0 0 0 0 0 0 0 0 0 0 56154 4686 50475 472664;472665;472666 375250 375250 0 VHVSEEGTEPEAMLQVLGPK Unmodified 2149.0725 0.072519601 819 P06396 GSN Gelsolin yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 81.416 81.59 3 3.3589E-05 94084 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.355 50.086 + 17214000 0 0 0 0 0 0 0 0 0 0 2431200 0 0 4832000 9950600 56155 819 50476 472667;472668;472669 375251;375252 375251 2 VHVTQEDFEMAVAK Oxidation (M) 1618.7661 0.76610724 1876 P62195 PSMC5 26S protease regulatory subunit 8 yes yes 0 1 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 53.395 53.971 3 0.0024955 60825 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 41.577 36.311 27034000 0 0 0 0 0 0 0 0 0 0 8235700 14373000 0 0 4425100 56156 1876 50477 472670;472671;472672 375253 375253 3042 1 VHVTVDLK Unmodified 909.52837 0.5283668 411 O60547 GMDS GDP-mannose 4,6 dehydratase yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 46.958 41.16 2 0.0024727 51416 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 123.69 79.875 72892000 61964000 0 10928000 0 0 0 0 0 0 0 0 0 0 0 0 56157 411 50478 472673;472674 375254;375255;375256;375257 375256 4 VHYETALAESEK Unmodified 1375.662 0.66195975 2086 Q03001 DST Dystonin yes yes 0 0 0 By MS/MS 2 0 1 1 37.676 34.244 2 0.037331 43265 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 79.148 51.894 1307900 0 0 1307900 0 0 0 0 0 0 0 0 0 0 0 0 56158 2086 50479 472675 375258 375258 0 VHYHPDSPAK Unmodified 1149.5567 0.55670682 330 O43435 TBX1 T-box transcription factor TBX1 yes yes 0 0 0 By MS/MS 10 0 1 1 7.6841 8.043 3 0.022076 5995 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 41.704 22.046 8568300 0 0 0 0 0 0 0 0 0 0 8568300 0 0 0 0 56159 330 50480 472676 375259 375259 1 VIAAEGEMNASR Unmodified 1246.5976 0.59758535 1213 P27105 STOM Erythrocyte band 7 integral membrane protein yes yes 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 32.304 32.497 2 0.0016138 34317 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 66.435 55.283 23412000 0 0 0 0 1203900 1517000 1911900 0 1175400 2870200 3750000 0 4155100 2340400 4488000 56160 1213 50481 472677;472678;472679;472680;472681;472682;472683;472684;472685 375260;375261 375260 2 VIAALLQTMEDQGNQR Oxidation (M) 1801.8992 0.89924668 149 O00410 IPO5 Importin-5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 2 1 1 65.728 65.989 2;3 1.4398E-27 75600 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 129.84 114.64 67746000 0 0 0 0 0 22578000 0 11108000 0 0 0 19888000 0 0 14172000 56161 149 50482 472686;472687;472688;472689;472690 375262;375263;375264;375265;375266;375267 375263 208 4 VIAALLQTMEDQGNQR Unmodified 1785.9043 0.90433206 149 O00410 IPO5 Importin-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 2 2 1 2 2 2 1 2 2 2 83.083 83.176 2;3 2.2937E-27 95829 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 161.99 150.75 161240000 0 0 0 0 3900400 11230000 1688900 3498400 5878300 29772000 16086000 21050000 0 14382000 53758000 56162 149 50482 472691;472692;472693;472694;472695;472696;472697;472698;472699;472700;472701;472702;472703;472704;472705;472706;472707;472708 375268;375269;375270;375271;375272;375273;375274;375275;375276;375277;375278;375279 375272 8 VIAAMTVGK Unmodified 888.51027 0.5102739 1937 P63010 AP2B1 AP-2 complex subunit beta yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.928 41.106 2 0.019674 46039 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 53.775 28.325 197250000 0 0 0 9871600 9759400 17795000 13544000 15190000 10097000 18532000 18838000 21013000 17146000 16422000 29044000 56163 1937 50483 472709;472710;472711;472712;472713;472714;472715;472716;472717;472718;472719;472720 375280;375281;375282;375283 375280 4 VIAAMTVGK Oxidation (M) 904.50519 0.50518852 1937 P63010 AP2B1 AP-2 complex subunit beta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 2 1 1 24.902 20.695 2 0.030904 21453 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 63.419 6.3714 140370000 31885000 103810000 4672100 0 0 0 0 0 0 0 0 0 0 0 0 56164 1937 50483 472721;472722;472723;472724 375284;375285;375286 375285 3 VIAATNRVDILDPALLR Unmodified 1849.0785 0.078531678 1066 P17980 PSMC3 26S protease regulatory subunit 6A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 84.143 84.206 3 7.8067E-19 97463 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 80.609 75.608 185150000 0 0 0 4702200 6152800 21544000 2421800 7057300 8035000 41472000 25349000 27191000 0 5876000 35354000 56165 1066 50484 472725;472726;472727;472728;472729;472730;472731;472732;472733;472734;472735 375287;375288;375289;375290;375291;375292;375293;375294 375288 8 VIACFDSLK Unmodified 1051.5372 0.53721693 2832;4594 Q5VZF2;Q9NR56 MBNL2;MBNL1 Muscleblind-like protein 2;Muscleblind-like protein 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.126 62.224 2 0.01448 70691 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 58.23 22.612 158000000 0 0 0 8911700 7446700 6022700 9529900 12307000 9713500 9742000 23329000 17985000 14642000 16572000 21800000 56166 2832;4594 50485 472736;472737;472738;472739;472740;472741;472742;472743;472744;472745;472746;472747 375295;375296;375297;375298;375299;375300;375301 375301 7 VIADEEQK Unmodified 930.46583 0.46582612 3802 Q96DX7 TRIM44 Tripartite motif-containing protein 44 yes yes 0 0 0 By MS/MS 2 0 1 1 10.615 7.3502 2 0.039951 10217 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.69 41.792 8569100 0 8569100 0 0 0 0 0 0 0 0 0 0 0 0 0 56167 3802 50486 472748 375302 375302 1 VIAEGDLGIVEK Unmodified 1241.6867 0.68671794 701 O95861 BPNT1 3'(2'),5'-bisphosphate nucleotidase 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 64.814 65.072 2 0.002833 73773 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.781 50.353 26548000 0 0 0 0 0 4225100 0 2765400 0 0 4621200 0 0 0 14936000 56168 701 50487 472749;472750;472751;472752 375303;375304 375304 2 VIAGLYQR Unmodified 918.5287 0.52870115 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.88 43.054 2 0.0038171 48252 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 132.94 81.975 1629300000 0 0 0 95593000 85926000 105360000 94750000 99583000 100950000 113600000 198120000 203900000 151350000 157540000 222620000 56169 1986 50488 472753;472754;472755;472756;472757;472758;472759;472760;472761;472762;472763;472764 375305;375306;375307;375308;375309;375310;375311;375312;375313 375307 5 VIAHSEYQK Unmodified 1073.5506 0.55055881 1611 P49914 MTHFS 5-formyltetrahydrofolate cyclo-ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 10.3 9.8654 2 0.00067098 14764 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 147.36 105.08 125780000 69661000 0 19009000 5027100 5187500 4494500 2199500 1879400 1881200 4211600 0 10799000 0 609510 823340 56170 1611 50489 472765;472766;472767;472768;472769;472770;472771;472772;472773;472774;472775;472776 375314;375315;375316;375317 375315 4 VIAHTQMR Oxidation (M) 970.50183 0.50183448 1402 P39023 RPL3 60S ribosomal protein L3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 5.8039 5.9165 2 0.01658 3679 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 58.917 17.415 39499000 0 0 0 2846500 3524200 2127600 2774000 2841900 0 4841700 2861400 3704900 4090900 5548300 4337900 56171 1402 50490 472777;472778;472779;472780;472781;472782;472783;472784;472785;472786;472787 375318;375319;375320;375321;375322 375318 2190 5 VIAHTQMR Unmodified 954.50692 0.50691985 1402 P39023 RPL3 60S ribosomal protein L3 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 10.9 11.097 2 0.049796 9170 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.994 37.356 18281000 0 0 0 1821900 0 0 0 0 0 0 0 5512800 0 4063300 6882500 56172 1402 50490 472788;472789;472790;472791 375323 375323 1 VIAIDIDPVK Unmodified 1081.6383 0.63831118 3974 Q96RS0 TGS1 Trimethylguanosine synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 77.732 77.774 2 0.035593 88970 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 41.427 11.109 24543000 0 0 0 0 2893100 5524800 3935700 0 0 0 4829100 0 3840800 3519800 0 56173 3974 50491 472792;472793;472794;472795;472796;472797 375324;375325;375326 375326 3 VIAINVDDPDAANYNDINDVK Unmodified 2287.0968 0.096820096 2505 Q15181 PPA1 Inorganic pyrophosphatase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.34 3.68 1 5 4 19 3 5 2 2 2 2 1 1 2 2 2 1 2 2 80.008 78.832 2;3 3.4465E-112 95770 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 189.09 184.01 3974400000 144990000 3410300000 8575600 0 13131000 12885000 9014000 8249200 5128200 19205000 70381000 66306000 5860500 46472000 153960000 56174 2505 50492 472798;472799;472800;472801;472802;472803;472804;472805;472806;472807;472808;472809;472810;472811;472812;472813;472814;472815;472816;472817;472818;472819;472820;472821;472822;472823;472824;472825;472826 375327;375328;375329;375330;375331;375332;375333;375334;375335;375336;375337;375338;375339;375340;375341;375342;375343;375344;375345;375346;375347;375348;375349;375350;375351;375352;375353 375333 24 VIAINVDDPDAANYNDINDVKR Unmodified 2443.1979 0.19793112 2505 Q15181 PPA1 Inorganic pyrophosphatase yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 73.962 74.259 3 3.143E-07 85589 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 54.834 47.388 15129000 0 0 0 0 0 0 0 0 0 0 0 5841500 0 0 9287200 56175 2505 50493 472827;472828 375354;375355 375355 2 VIALGLPVPR Unmodified 1033.6648 0.6648007 16 A3KMH1 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 82.799 82.844 2 0.0036126 95961 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 75.854 59.078 34463000 0 0 0 1093200 2984700 3569300 2901200 3808200 3080500 4323900 4176400 6979000 1546200 0 0 56176 16 50494 472829;472830;472831;472832;472833;472834;472835;472836;472837;472838 375356;375357;375358;375359;375360;375361;375362;375363;375364 375362 9 VIANQQQVLQR Unmodified 1295.731 0.73098279 3207 Q86YD1 PTOV1 Prostate tumor-overexpressed gene 1 protein yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 36.756 36.891 2 0.0086147 41313 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 51.346 39.983 5564800 0 0 0 0 1533000 0 0 0 0 0 0 0 0 0 4031800 56177 3207 50495 472839;472840 375365 375365 1 VIAPMLSR Unmodified 885.51061 0.51060825 414 O60568 PLOD3 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 53.823 54.479 2 0.043235 61058 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.325 18.906 13737000 0 0 0 0 0 0 0 0 0 0 0 5025500 0 0 8711500 56178 414 50496 472841;472842 375366 375366 1 VIAPNPAQLQGQR Unmodified 1390.7681 0.76809658 3594 Q8WXI9 GATAD2B Transcriptional repressor p66-beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.741 52.884 2 8.4329E-09 60898 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 110.87 94.674 268050000 0 0 0 20826000 20928000 20457000 21358000 17003000 12237000 29190000 21025000 25792000 23524000 22714000 32994000 56179 3594 50497 472843;472844;472845;472846;472847;472848;472849;472850;472851;472852;472853;472854 375367;375368;375369;375370;375371;375372;375373;375374;375375;375376;375377;375378 375377 12 VIAPSSSLPTSLTIHHPR Unmodified 1912.053 0.053045209 2075 Q02413 DSG1 Desmoglein-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 2 1 2 2 2 2 2 1 1 2 65.804 65.879 3;4 1.8135E-11 76488 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 109.36 100.26 615950000 0 0 0 59629000 9662400 41411000 12923000 240530000 29184000 22933000 30325000 71362000 36693000 13719000 47580000 56180 2075 50498 472855;472856;472857;472858;472859;472860;472861;472862;472863;472864;472865;472866;472867;472868;472869;472870;472871;472872;472873;472874;472875 375379;375380;375381;375382;375383;375384;375385;375386;375387;375388;375389;375390;375391;375392;375393;375394;375395 375394 16 VIAPTNAEVLPILPEPESLELK Unmodified 2371.325 0.32502912 3590 Q8WXG6 MADD MAP kinase-activating death domain protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 95.426 95.591 3 0.00010698 111177 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 28.765 25.799 11463000 0 0 0 0 0 0 0 804070 0 4097300 2230800 0 0 0 4330900 56181 3590 50499 472876;472877;472878;472879 375396;375397;375398 375396 3 VIAQLSECEK Unmodified 1175.5856 0.58562368 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 37.69 36.574 2 8.4495E-06 46343 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.31 91.989 872790000 11122000 451700000 3895100 24708000 20541000 34774000 26608000 23107000 20005000 33245000 34038000 51370000 42515000 41884000 53277000 56182 3676 50500 472880;472881;472882;472883;472884;472885;472886;472887;472888;472889;472890;472891;472892;472893;472894;472895 375399;375400;375401;375402;375403;375404;375405;375406;375407;375408;375409;375410;375411;375412;375413 375402 15 VIAQQVQLQQQQEQVR Unmodified 1922.0334 0.033372399 2061 Q01664 TFAP4 Transcription factor AP-4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 13 2 1 1 2 1 1 2 1 2 50.255 50.372 2;3 5.1203E-29 55878 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 118.16 106.64 199680000 0 0 0 16229000 10707000 0 12439000 27135000 0 0 26356000 27150000 0 0 79669000 56183 2061 50501 472896;472897;472898;472899;472900;472901;472902;472903;472904;472905;472906;472907;472908 375414;375415;375416;375417;375418;375419;375420;375421;375422;375423;375424;375425;375426 375416 13 VIASELGSMPELK Oxidation (M) 1388.7221 0.72211717 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.56 3.62 4 1 11 1 3 1 1 1 1 1 1 1 1 1 1 1 1 60.636 59.747 2 2.0682E-18 76508 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 132.25 118.13 560730000 0 411970000 11480000 0 6948300 15148000 9133200 6959100 8559100 15671000 14873000 17856000 11326000 12001000 18806000 56184 4819 50502 472909;472910;472911;472912;472913;472914;472915;472916;472917;472918;472919;472920;472921;472922;472923;472924 375427;375428;375429;375430;375431;375432;375433;375434;375435;375436;375437;375438;375439;375440;375441;375442;375443 375431 6191 14 VIASELGSMPELK Unmodified 1372.7272 0.72720254 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.39 3.7 5 1 12 1 4 1 1 1 1 1 1 1 1 1 1 1 1 1 77.584 76.239 2;3 2.316E-13 87840 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 154.24 121.92 3067300000 27566000 2779100000 19124000 5847300 7976100 22826000 8858400 15879000 9444500 20687000 27731000 19618000 15314000 21078000 66309000 56185 4819 50502 472925;472926;472927;472928;472929;472930;472931;472932;472933;472934;472935;472936;472937;472938;472939;472940;472941;472942 375444;375445;375446;375447;375448;375449;375450;375451;375452;375453;375454;375455;375456;375457;375458;375459;375460;375461;375462 375451 18 VIASELGSMPELKK Unmodified 1500.8222 0.82216556 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.8 4 1 8 2 2 1 1 1 1 1 1 1 1 1 69.461 67.255 3 0.00026069 88845 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.894 53.822 300220000 46293000 171050000 32332000 3288200 2212500 0 4276000 3801000 0 5357200 7473500 10308000 0 0 13829000 56186 4819 50503 472943;472944;472945;472946;472947;472948;472949;472950;472951;472952;472953;472954;472955 375463;375464;375465;375466;375467;375468;375469;375470;375471 375467 9 VIASELGSMPELKK Oxidation (M) 1516.8171 0.81708018 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 1 1 By MS/MS By MS/MS 2.2 0.4 4 1 3 2 54.493 49.627 3 0.0010775 62243 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 60.196 51.002 120910000 0 87722000 33190000 0 0 0 0 0 0 0 0 0 0 0 0 56187 4819 50503 472956;472957;472958;472959;472960 375472;375473;375474;375475 375475 6191 4 VIASMTVGK Oxidation (M) 920.5001 0.50010314 2178 Q10567 AP1B1 AP-1 complex subunit beta-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 6 2 2 2 20.388 16.681 2 0.01891 22097 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.665 19.46 196010000 52217000 136700000 7096900 0 0 0 0 0 0 0 0 0 0 0 0 56188 2178 50504 472961;472962;472963;472964;472965;472966 375476;375477;375478;375479;375480 375478 3552 5 VIASMTVGK Unmodified 904.50519 0.50518852 2178 Q10567 AP1B1 AP-1 complex subunit beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.2 3.92 3 2 1 1 1 1 1 39.005 36.178 2 0.011755 40297 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 62.338 4.2182 535520000 246740000 247880000 5807000 0 0 0 0 0 0 0 12802000 0 0 0 22292000 56189 2178 50504 472967;472968;472969;472970;472971 375481;375482;375483 375483 2 VIATFTCSGEK Unmodified 1211.5856 0.58562368 1561 P49189 ALDH9A1 4-trimethylaminobutyraldehyde dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 41.582 41.742 2 0.00047061 45417 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 84.213 71.586 108930000 0 0 0 16343000 3757900 4612600 0 3621200 2850600 4552400 0 13877000 5268800 13589000 40455000 56190 1561 50505 472972;472973;472974;472975;472976;472977;472978;472979;472980;472981 375484;375485;375486;375487;375488;375489;375490;375491;375492 375488 7 VIAVADDFCK Unmodified 1136.5536 0.55359527 4505 Q9HC35 EML4 Echinoderm microtubule-associated protein-like 4 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 63.5 58.685 2 0.0084193 71900 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 78.334 59.077 130160000 0 128120000 2037500 0 0 0 0 0 0 0 0 0 0 0 0 56191 4505 50506 472982;472983;472984 375493;375494;375495 375494 3 VIAVYDLGGGTFDISILEIQK Unmodified 2250.2148 0.21475039 1399 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 0 0 By MS/MS 2.67 0.471 1 2 3 99.198 94.137 2;3 8.1285E-08 99089 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 72.421 69.277 33700000 33700000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56192 1399 50507 472985;472986;472987 375496;375497;375498 375497 2 VICAEEPYICK Unmodified 1380.6418 0.64175835 1612 P49915 GMPS GMP synthase [glutamine-hydrolyzing] yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 2 1 52.753 52.957 2 0.0076235 59459 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 68.016 55.226 7199900000 0 0 0 355090000 0 1052500000 306370000 1403400 758960000 981540000 845990000 869610000 889250000 488690000 650510000 56193 1612 50508 472988;472989;472990;472991;472992;472993;472994;472995;472996;472997;472998;472999 375499;375500;375501;375502;375503;375504 375502 3 VICCTEDMLEK Oxidation (M) 1412.5986 0.59857291 4172 Q9BV20 MRI1 Methylthioribose-1-phosphate isomerase yes yes 0 1 0 By MS/MS 2 0 1 1 38.281 33.314 2 0.031253 43537 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 50.978 38.69 9753500 0 9753500 0 0 0 0 0 0 0 0 0 0 0 0 0 56194 4172 50509 473000 375505 375505 1 VICCTEDMLEK Unmodified 1396.6037 0.60365829 4172 Q9BV20 MRI1 Methylthioribose-1-phosphate isomerase yes yes 0 0 0 By MS/MS 2 0 1 1 55.417 49.602 2 0.0054697 64042 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.047 65.017 89950000 0 89950000 0 0 0 0 0 0 0 0 0 0 0 0 0 56195 4172 50509 473001 375506 375506 1 VIDDTNITR Unmodified 1045.5404 0.54038805 814 P05783 KRT18 Keratin, type I cytoskeletal 18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 2 2 1 1 2 2 2 1 1 1 1 1 30.997 31.113 2 2.1279E-05 33731 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 135.79 78.232 12576000000 0 0 0 545540000 962190000 1064000000 1171300000 790470000 811470000 952800000 1129400000 1978100000 849250000 1057000000 1264500000 56196 814 50510 473002;473003;473004;473005;473006;473007;473008;473009;473010;473011;473012;473013;473014;473015;473016;473017;473018 375507;375508;375509;375510;375511;375512;375513;375514;375515;375516;375517;375518;375519;375520;375521;375522 375515 12 VIDDTNITRLQLETEIEALK Unmodified 2313.2428 0.24275605 814 P05783 KRT18 Keratin, type I cytoskeletal 18 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 2 3 1 93.022 88.512 3 8.3476E-10 114246 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.668 82.308 701920000 289740000 399440000 12734000 0 0 0 0 0 0 0 0 0 0 0 0 56197 814 50511 473019;473020;473021;473022;473023;473024 375523;375524;375525;375526;375527;375528;375529;375530;375531;375532 375526 10 VIDGLETLDELEK Unmodified 1472.761 0.76100509 4366 Q9H2H8 PPIL3 Peptidyl-prolyl cis-trans isomerase-like 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching 7.87 3.54 4 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 85.037 83.763 2 5.5757E-14 104000 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 152.7 122.13 1662800000 61715000 1475100000 17261000 0 4404000 6771000 5503900 5316300 4786000 9618900 15662000 13122000 6213800 8396400 28933000 56198 4366 50512 473025;473026;473027;473028;473029;473030;473031;473032;473033;473034;473035;473036;473037;473038;473039 375533;375534;375535;375536;375537;375538;375539;375540;375541;375542 375534 8 VIDGPHSGREGEIR Unmodified 1520.7696 0.76955314 136 O00267 SUPT5H Transcription elongation factor SPT5 yes yes 0 0 1 By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 1 1 2 1 2 1 1 2 2 2 2 19.889 20.135 3;4 0.0011202 20948 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 48.112 38.662 101210000 0 0 0 4971000 2752900 8094700 8350900 3920900 6328900 5993900 7020400 13490000 12698000 12572000 15017000 56199 136 50513 473040;473041;473042;473043;473044;473045;473046;473047;473048;473049;473050;473051;473052;473053;473054;473055;473056;473057 375543;375544;375545 375543 3 VIDGTSGATLQASALSAK Unmodified 1688.8945 0.89447888 4584 Q9NR09 BIRC6 Baculoviral IAP repeat-containing protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.91 3.42 2 1 8 1 2 1 1 1 1 1 1 1 1 62.733 61.181 2 1.2565E-19 77066 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.93 100.57 143170000 2561000 107390000 0 0 0 4675200 3558400 4092900 1597100 4563600 0 6337200 0 3333500 5065300 56200 4584 50514 473058;473059;473060;473061;473062;473063;473064;473065;473066;473067;473068 375546;375547;375548;375549;375550;375551;375552;375553;375554 375548 9 VIDIEGCAHIVHK Unmodified 1489.7711 0.77113304 1325 P32929 CTH Cystathionine gamma-lyase yes yes 0 0 0 By MS/MS By matching By MS/MS 2 0 3 1 1 1 58.78 52.801 3 0.00028418 71441 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 92.247 84.791 48730000 34870000 9895300 3965500 0 0 0 0 0 0 0 0 0 0 0 0 56201 1325 50515 473069;473070;473071 375555;375556 375556 2 VIDIFDTDGNGEVDFK Unmodified 1782.8312 0.83120992 1939 P63098 PPP3R1 Calcineurin subunit B type 1 yes yes 0 0 0 By MS/MS 10 0 1 1 85.832 86 2 1.3249E-11 99439 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 97.911 87.958 3708500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3708500 56202 1939 50516 473072 375557 375557 1 VIDLDMFK Oxidation (M) 995.49977 0.49976879 2685 Q4J6C6 PREPL Prolyl endopeptidase-like yes yes 0 1 0 By MS/MS By MS/MS 2 0 3 1 2 74.401 70.786 2 0.025037 87111 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 77.282 47.944 88361000 0 78014000 10346000 0 0 0 0 0 0 0 0 0 0 0 0 56203 2685 50517 473073;473074;473075 375558;375559 375559 2 VIDLDMFK Unmodified 979.50485 0.50485417 2685 Q4J6C6 PREPL Prolyl endopeptidase-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 84.57 82.223 2 0.01816 102316 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.142 34.617 154580000 0 146750000 2753600 0 0 0 0 0 0 0 0 0 0 0 5079100 56204 2685 50517 473076;473077;473078 375560;375561 375560 2 VIDLTPPWEHYCTK Unmodified 1757.8447 0.84469192 452 O75061 DNAJC6 Putative tyrosine-protein phosphatase auxilin yes yes 0 0 0 By MS/MS 2 0 1 1 87.31 79.179 3 0.043607 103299 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 28.546 19.718 7129100 7129100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56205 452 50518 473079 375562 375562 1 VIDLTRNEATVETLTETK Unmodified 2032.0688 0.068814432 4302 Q9GZR7 DDX24 ATP-dependent RNA helicase DDX24 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.85 2.71 1 1 11 1 1 1 1 1 1 1 1 1 1 1 1 1 75.326 74.895 3 0.0016166 89586 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 49.993 40.71 74793000 0 4779800 7974100 4368200 4431200 6543800 3314000 4212500 5479700 9818800 5559400 0 4184300 4330000 9796900 56206 4302 50519 473080;473081;473082;473083;473084;473085;473086;473087;473088;473089;473090;473091;473092 375563;375564;375565;375566;375567;375568;375569 375565 7 VIDNFTSQLK Unmodified 1163.6186 0.61863837 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 4 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 60.478 59.368 2 0.0017327 75919 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.48 68.7 683980000 10852000 436740000 6179800 15486000 13613000 16428000 16852000 12637000 14819000 21060000 24786000 36913000 16143000 16813000 24655000 56207 1286 50520 473093;473094;473095;473096;473097;473098;473099;473100;473101;473102;473103;473104;473105;473106;473107;473108 375570;375571;375572;375573;375574;375575;375576;375577;375578;375579 375572 6 VIDPATATSVDLR Unmodified 1356.7249 0.72489436 1642 P50991 CCT4 T-complex protein 1 subunit delta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.41 2.1 2 25 1 1 2 2 3 2 2 2 2 2 2 2 2 2 65.801 65.657 2;3 1.009E-05 75436 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 107.24 87.457 3488300000 309890 58089000 0 173030000 192510000 339680000 208030000 211120000 172570000 325500000 355720000 423370000 250270000 328280000 449880000 56208 1642 50521 473109;473110;473111;473112;473113;473114;473115;473116;473117;473118;473119;473120;473121;473122;473123;473124;473125;473126;473127;473128;473129;473130;473131;473132;473133;473134;473135 375580;375581;375582;375583;375584;375585;375586;375587;375588;375589;375590;375591;375592;375593;375594;375595;375596;375597;375598;375599 375599 17 VIDPATATSVDLRDIK Unmodified 1712.9309 0.93086439 1642 P50991 CCT4 T-complex protein 1 subunit delta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.33 3.93 1 16 4 24 5 13 3 2 2 2 2 2 2 2 2 2 2 2 2 76.416 75.101 2;3 6.2948E-38 93966 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 155.02 105.52 15738000000 832550000 11572000000 951270000 100970000 97819000 243230000 154620000 152280000 174790000 224350000 250380000 264840000 141580000 192620000 384640000 56209 1642 50522 473136;473137;473138;473139;473140;473141;473142;473143;473144;473145;473146;473147;473148;473149;473150;473151;473152;473153;473154;473155;473156;473157;473158;473159;473160;473161;473162;473163;473164;473165;473166;473167;473168;473169;473170;473171;473172;473173;473174;473175;473176;473177;473178;473179;473180 375600;375601;375602;375603;375604;375605;375606;375607;375608;375609;375610;375611;375612;375613;375614;375615;375616;375617;375618;375619;375620;375621;375622;375623;375624;375625;375626;375627;375628;375629;375630;375631;375632;375633;375634;375635;375636 375623 30 VIDPVAPR Unmodified 865.50215 0.50215205 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.778 38.959 2 0.0044499 41917 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.63 97.674 1098400000 0 0 0 46493000 45025000 98331000 70811000 60425000 53125000 110150000 134560000 137060000 76472000 75409000 190580000 56210 848 50523 473181;473182;473183;473184;473185;473186;473187;473188;473189;473190;473191;473192 375637;375638;375639;375640;375641;375642;375643;375644;375645;375646;375647;375648 375640 6 VIDPVAPRYVALLK Unmodified 1552.9341 0.93409927 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 1 By MS/MS 2 0 1 1 88.262 80.132 3 0.02352 104160 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 37.793 12.615 56886000 56886000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56211 848 50524 473193 375649 375649 1 VIDPVTGKPCAGTTYLESPLSSETTQLSK Unmodified 3078.5431 0.54309675 5114 Q9Y2R5 MRPS17 28S ribosomal protein S17, mitochondrial yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 84.148 80.15 3 1.2222E-22 99989 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.881 79.72 39292000 0 39292000 0 0 0 0 0 0 0 0 0 0 0 0 0 56212 5114 50525 473194;473195 375650;375651;375652 375651 3 VIDQQNGLYR Unmodified 1204.62 0.62003536 1221 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 35.011 35.182 2 0.00068079 38901 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 121.62 86.811 173640000 0 0 0 10033000 4944800 20916000 8482800 10420000 0 25510000 18216000 19799000 0 13437000 41882000 56213 1221 50526 473196;473197;473198;473199;473200;473201;473202;473203;473204;473205 375653;375654;375655;375656;375657;375658;375659;375660;375661;375662 375653 10 VIDQQNGLYRCEK Unmodified 1621.7882 0.78823967 1221 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 3 1 35.444 30.645 2;3 6.3945E-18 40314 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.83 113.91 93639000 6834700 51362000 35442000 0 0 0 0 0 0 0 0 0 0 0 0 56214 1221 50527 473206;473207;473208;473209;473210 375663;375664;375665;375666;375667 375663 5 VIDRDGFEVMECIK Unmodified 1709.8117 0.81167723 4693 Q9NW82 WDR70 WD repeat-containing protein 70 yes yes 0 0 1 By MS/MS 2 0 1 1 80.549 72.419 3 0.0010719 95138 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.037 50.891 26277000 26277000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56215 4693 50528 473211 375668 375668 0 VIDRELYQQLQR Unmodified 1559.842 0.8419898 2501 Q15149 PLEC Plectin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 57.997 58.169 3 1.6237E-05 66188 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 92.19 71.763 100020000 0 0 0 6149400 0 9922300 6437500 0 7123700 12014000 9077300 15343000 11724000 7545500 14683000 56216 2501 50529 473212;473213;473214;473215;473216;473217;473218;473219;473220;473221;473222 375669;375670;375671;375672;375673;375674;375675;375676;375677;375678;375679;375680 375670 11 VIDSSDVVVQVLDAR Unmodified 1613.8625 0.86245047 2345 Q13823 GNL2 Nucleolar GTP-binding protein 2 yes yes 0 0 0 By MS/MS 10 0 1 1 86.664 86.771 2 0.016729 100609 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 62.408 49.831 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56217 2345 50530 473223 375681 375681 1 VIDTQQK Unmodified 830.44978 0.44978213 446 O60925 PFDN1 Prefoldin subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By matching 2 0 3 1 1 1 7.1641 4.1722 2 0.013428 7503 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 122.54 32.639 421030000 62658000 355180000 3186100 0 0 0 0 0 0 0 0 0 0 0 0 56218 446 50531 473224;473225;473226 375682;375683 375683 2 VIDTTTLPVYPK Unmodified 1345.7493 0.74931819 4223 Q9BXB5 OSBPL10 Oxysterol-binding protein-related protein 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 72.553 72.012 2 0.00012198 82851 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 87.258 63.904 199130000 0 44929000 0 8512400 9256000 8956600 12434000 13387000 10190000 14884000 16128000 21025000 9535400 13667000 16227000 56219 4223 50532 473227;473228;473229;473230;473231;473232;473233;473234;473235;473236;473237;473238;473239;473240 375684;375685;375686;375687;375688;375689;375690;375691;375692;375693;375694;375695;375696 375690 12 VIDVFAMPQSGTGVSVEAVDPVFQAK Oxidation (M) 2706.3575 0.35746823 161 O00487 PSMD14 26S proteasome non-ATPase regulatory subunit 14 yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 91.319 91.223 3 5.8462E-09 105877 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 50.029 47.381 6564600 0 0 0 857180 0 0 0 0 0 5707400 0 0 0 0 0 56220 161 50533 473241;473242 375697 375697 226 1 VIDVGSEWR Unmodified 1059.5349 0.53490874 2034 Q00403 GTF2B Transcription initiation factor IIB yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 58.211 58.605 2 0.006387 66434 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 75.213 39.857 62741000 0 0 0 0 0 0 0 0 0 0 27730000 0 0 12850000 22161000 56221 2034 50534 473243;473244;473245;473246;473247 375698;375699;375700;375701;375702 375701 5 VIEAYCTSAK Unmodified 1140.5485 0.5485099 2379 Q14155 ARHGEF7 Rho guanine nucleotide exchange factor 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 29.052 28.578 2 0.003862 30804 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 85.731 68.955 155560000 0 37777000 0 4969700 5628400 10743000 8612300 5381200 6886000 10358000 12033000 16607000 12276000 9291600 14994000 56222 2379 50535 473248;473249;473250;473251;473252;473253;473254;473255;473256;473257;473258;473259;473260;473261 375703;375704;375705;375706;375707;375708;375709;375710;375711;375712;375713;375714;375715;375716 375708 14 VIECDVVK Unmodified 960.49502 0.49501776 3948 Q96PK6 RBM14 RNA-binding protein 14 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 31.655 31.821 2 0.047672 34143 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 47.749 25.789 60576000 0 0 0 5273100 6393300 0 7177000 0 0 7538300 0 12599000 10337000 0 11258000 56223 3948 50536 473262;473263;473264;473265;473266;473267;473268 375717 375717 1 VIEDIYEK Unmodified 1007.5175 0.51752734 393 O60306 AQR Intron-binding protein aquarius yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.23 3.24 2 1 10 2 1 1 1 1 1 1 1 1 1 1 1 42.454 41.563 2 0.013378 46258 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 72.485 55.709 339580000 0 223200000 1859700 6932200 0 11070000 6207300 6783300 6969400 14175000 14220000 18364000 13179000 0 16621000 56224 393 50537 473269;473270;473271;473272;473273;473274;473275;473276;473277;473278;473279;473280;473281 375718;375719;375720;375721;375722;375723;375724;375725;375726;375727 375726 10 VIEDNEYTAR Unmodified 1208.5673 0.56733108 852 P07948 LYN Tyrosine-protein kinase Lyn no no 0 0 0 By MS/MS 10 0 1 1 27.503 27.844 2 0.028042 29957 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 58.676 47.811 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56225 852 50538 473282 375728 375728 1 VIEDRDSQLR Unmodified 1229.6364 0.6364137 3311 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 18.879 19.161 3 0.0054578 19461 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 49.189 32.518 294030000 0 0 0 0 0 46436000 0 44134000 0 67219000 67546000 0 0 0 68696000 56226 3311 50539 473283;473284;473285;473286;473287;473288 375729;375730;375731;375732;375733 375732 3 VIEDVAFACALTSSVPTTK Unmodified 2008.0187 0.018693117 2411 Q14527 HLTF Helicase-like transcription factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.72 2.93 4 21 2 2 2 2 2 1 2 2 2 2 2 2 1 1 87.361 86.814 2;3 1.2046E-41 100870 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 154.65 142.29 396560000 0 230410000 4200200 2355900 10931000 9077600 3711500 13366000 16492000 26332000 25274000 29271000 5050900 4773700 15311000 56227 2411 50540 473289;473290;473291;473292;473293;473294;473295;473296;473297;473298;473299;473300;473301;473302;473303;473304;473305;473306;473307;473308;473309;473310;473311;473312;473313 375734;375735;375736;375737;375738;375739;375740;375741;375742;375743;375744;375745;375746;375747;375748;375749;375750;375751;375752;375753;375754 375751 21 VIEEEQRLAGIENQSLDQTPQSHSSEQIQAIK Unmodified 3604.7969 0.79689669 2406 Q14432 PDE3A cGMP-inhibited 3',5'-cyclic phosphodiesterase A yes yes 0 0 1 By MS/MS 2 0 1 1 75.246 72.399 4 0.0037509 88371 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 28.443 23.682 4722700 0 0 4722700 0 0 0 0 0 0 0 0 0 0 0 0 56228 2406 50541 473314 375755 375755 1 VIEEEQRLAGIENQSLDQTPQSHSSEQIQAIKEEEEEK Unmodified 4378.1048 0.10482519 2406 Q14432 PDE3A cGMP-inhibited 3',5'-cyclic phosphodiesterase A yes yes 0 0 2 By MS/MS 2 0 2 2 77.374 69.243 4;5 6.4485E-26 91198 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.318 62.507 37820000 37820000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56229 2406 50542 473315;473316 375756;375757 375757 2 VIEEEWQQVDR Unmodified 1429.6838 0.68375782 1446 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.622 56.745 2 1.2483E-107 64792 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 214.58 206.94 1307000000 0 0 0 72820000 99580000 95282000 91723000 86113000 71873000 97195000 157050000 131250000 140600000 101410000 162130000 56230 1446 50543 473317;473318;473319;473320;473321;473322;473323;473324;473325;473326;473327;473328 375758;375759;375760;375761;375762;375763;375764;375765;375766;375767;375768;375769;375770;375771;375772;375773;375774 375770 17 VIEEEWQQVDRQLPSLACK Unmodified 2327.158 0.15798057 1446 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 84.553 80.935 3 0.00073443 100683 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 52.298 40.511 40306000 0 29166000 11140000 0 0 0 0 0 0 0 0 0 0 0 0 56231 1446 50544 473329;473330 375775 375775 1 VIEELLQTER Unmodified 1228.6663 0.66631685 2993 Q6XZF7 DNMBP Dynamin-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 64.818 64.971 2 0.010686 74419 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 55.567 35.426 17065000 0 0 0 0 0 2601200 2924100 0 0 4028900 3592800 0 0 3918400 0 56232 2993 50545 473331;473332;473333;473334;473335 375776;375777;375778 375778 3 VIEEQLEPAVEK Unmodified 1382.7293 0.72931103 1464 P42704 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 53.563 52.418 2 1.8687E-09 66293 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.36 102.38 494930000 8630100 343490000 0 6068100 4494700 17867000 6661400 6232600 6106500 17580000 16347000 12163000 11055000 10270000 27964000 56233 1464 50546 473336;473337;473338;473339;473340;473341;473342;473343;473344;473345;473346;473347;473348;473349;473350 375779;375780;375781;375782;375783;375784;375785;375786;375787;375788;375789;375790;375791;375792 375782 12 VIEETEER Unmodified 1003.4822 0.48220447 1802 P58107 EPPK1 Epiplakin yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.813 13.975 2 0.02313 13633 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 60.59 30.086 330420000 0 0 0 28066000 28893000 22893000 21706000 19742000 14659000 33001000 33527000 45044000 27507000 23524000 31855000 56234 1802 50547 473351;473352;473353;473354;473355;473356;473357;473358;473359;473360;473361;473362 375793;375794;375795;375796 375795 4 VIEETEERLSK Unmodified 1331.6933 0.69325988 1802 P58107 EPPK1 Epiplakin yes no 0 0 1 By MS/MS By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.373 28.568 2 0.0092961 29695 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.044 56.168 56842000 0 0 0 4226600 3513100 2926400 3035500 4733100 2309000 6609800 8249400 6576100 4963600 3377600 6321300 56235 1802 50548 473363;473364;473365;473366;473367;473368;473369;473370;473371;473372;473373;473374 375797;375798 375797 1 VIEFSEDK Unmodified 965.47058 0.47057715 2738 Q5JTD0 TJAP1 Tight junction-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 37.659 37.748 2 0.017693 42301 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 65.252 23.75 39339000 0 0 0 3004100 3386000 3281700 4133100 0 3464600 4117500 0 8463300 4881200 4607700 0 56236 2738 50549 473375;473376;473377;473378;473379;473380;473381;473382;473383 375799;375800;375801;375802;375803 375803 5 VIEGDVVSALNK Unmodified 1242.682 0.68196691 1532 P48059 LIMS1 LIM and senescent cell antigen-like-containing domain protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.567 63.659 2 0.0015922 72745 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 121.83 85.435 238710000 0 0 0 12028000 12934000 20734000 13779000 15787000 7642800 23452000 27405000 26794000 16767000 19673000 41711000 56237 1532 50550 473384;473385;473386;473387;473388;473389;473390;473391;473392;473393;473394;473395 375804;375805;375806;375807;375808;375809;375810 375805 0 VIEGINR Unmodified 799.4552 0.45520186 2981 Q6UWP8 SBSN Suprabasin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 24.979 25.174 2 0.03046 26937 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 74.717 8.8197 185560000 0 0 0 45898000 17088000 14728000 11681000 26791000 0 16629000 12935000 21888000 0 7897100 10024000 56238 2981 50551 473396;473397;473398;473399;473400;473401;473402;473403;473404;473405 375811 375811 1 VIEGLDTGLQGMCVGER Oxidation (M) 1848.871 0.87098302 3744 Q96AY3 FKBP10 Peptidyl-prolyl cis-trans isomerase FKBP10 yes yes 0 1 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 66.583 66.813 2 0.0001264 76433 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 68.44 56.575 29737000 0 0 0 0 0 7227600 3409000 1842900 0 5489400 0 5935600 0 0 5832000 56239 3744 50552 473406;473407;473408;473409;473410;473411;473412 375812;375813;375814;375815 375813 5323 4 VIEGLDTGLQGMCVGER Unmodified 1832.8761 0.8760684 3744 Q96AY3 FKBP10 Peptidyl-prolyl cis-trans isomerase FKBP10 yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 78.391 78.53 2 3.9441E-36 90387 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 127.76 87.838 37765000 0 0 0 0 0 4160100 0 0 0 5032900 4833000 5757200 0 4654100 13327000 56240 3744 50552 473413;473414;473415;473416;473417;473418 375816;375817 375817 2 VIEGSLSPK Unmodified 928.52295 0.52294707 3252 Q8IX01 SUGP2 SURP and G-patch domain-containing protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 51.855 47.934 2 0.03532 59834 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 63.565 17.139 62567000 0 0 62567000 0 0 0 0 0 0 0 0 0 0 0 0 56241 3252 50553 473419 375818 375818 1 VIEHIMEDLDTNADK Oxidation (M) 1757.8142 0.81417965 824 P06702 S100A9 Protein S100-A9 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 9.23 2.3 2 1 27 2 1 3 2 3 2 1 3 3 3 1 3 2 1 47.813 47.575 2;3 8.675E-72 54050 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 184.34 170.18 1897500000 0 27803000 2862300 956930000 53478000 107580000 52601000 47263000 63619000 157530000 149120000 25988000 200870000 35154000 16734000 56242 824 50554 473420;473421;473422;473423;473424;473425;473426;473427;473428;473429;473430;473431;473432;473433;473434;473435;473436;473437;473438;473439;473440;473441;473442;473443;473444;473445;473446;473447;473448;473449 375819;375820;375821;375822;375823;375824;375825;375826;375827;375828;375829;375830;375831;375832;375833;375834;375835;375836 375831 992 16 VIEHIMEDLDTNADK Unmodified 1741.8193 0.81926503 824 P06702 S100A9 Protein S100-A9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 25 3 2 2 2 2 2 2 2 2 2 2 2 66.595 66.65 2;3 2.4747E-192 77708 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 255.16 237.68 484530000 0 0 0 149490000 15117000 34308000 14652000 45397000 15031000 35168000 61339000 32294000 21438000 27946000 32343000 56243 824 50554 473450;473451;473452;473453;473454;473455;473456;473457;473458;473459;473460;473461;473462;473463;473464;473465;473466;473467;473468;473469;473470;473471;473472;473473;473474 375837;375838;375839;375840;375841;375842;375843;375844;375845;375846;375847;375848;375849;375850;375851;375852;375853;375854;375855;375856;375857;375858;375859 375853 19 VIELENWTEGK Unmodified 1316.6612 0.66123147 4638 Q9NTX5 ECHDC1 Ethylmalonyl-CoA decarboxylase yes yes 0 0 0 By MS/MS 2 0 1 1 78.527 73.792 2 0.0015104 92131 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.06 78.633 111750000 0 111750000 0 0 0 0 0 0 0 0 0 0 0 0 0 56244 4638 50555 473475 375860 375860 1 VIELFSVCTNEDPK Unmodified 1649.7971 0.79707302 3905 Q96KB5 PBK Lymphokine-activated killer T-cell-originated protein kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 81.402 80.286 2 0.00020909 93264 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 80.979 67.797 360070000 30731000 156960000 6493800 4017200 6412500 17048000 9105800 8607300 9206500 23925000 19129000 19623000 9222400 10308000 29278000 56245 3905 50556 473476;473477;473478;473479;473480;473481;473482;473483;473484;473485;473486;473487;473488;473489;473490;473491 375861;375862;375863;375864;375865;375866;375867;375868;375869;375870;375871;375872;375873 375871 11 VIELLPEK Unmodified 939.56408 0.56408361 4370 Q9H2M9 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.453 65.541 2 0.0096391 75085 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 82.241 48.068 166610000 0 0 0 8152000 8870300 13653000 11695000 12512000 9259300 15133000 16254000 17437000 17121000 16447000 20079000 56246 4370 50557 473492;473493;473494;473495;473496;473497;473498;473499;473500;473501;473502;473503 375874;375875;375876;375877 375875 4 VIELPNIQK Unmodified 1052.623 0.62299547 1670 P51784 USP11 Ubiquitin carboxyl-terminal hydrolase 11 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 68.138 68.344 2 0.0073015 77721 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.789 48.996 27606000 0 0 0 0 0 2986200 1726900 0 0 4457200 0 3933500 3459300 3609200 7433500 56247 1670 50558 473504;473505;473506;473507;473508;473509;473510 375878;375879;375880;375881 375878 4 VIELQEIISK Unmodified 1170.686 0.68598966 2239 Q13136 PPFIA1 Liprin-alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.86 3.4 1 1 5 2 1 1 1 1 1 82.188 80.672 2 0.0043491 100657 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.55 54.188 89454000 0 71616000 0 0 0 0 3659400 0 4333500 9844700 0 0 0 0 0 56248 2239 50559 473511;473512;473513;473514;473515;473516;473517 375882;375883;375884;375885;375886;375887 375885 6 VIELTGDVTPDMK Unmodified 1416.717 0.71703179 3320 Q8N3C0 ASCC3 Activating signal cointegrator 1 complex subunit 3 yes yes 0 0 0 By MS/MS 2 0 1 1 75.49 70.55 2 0.0020585 88271 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.184 48.881 77351000 0 77351000 0 0 0 0 0 0 0 0 0 0 0 0 0 56249 3320 50560 473518 375888 375888 1 VIELTGTARQVK Unmodified 1313.7667 0.76669959 2788 Q5T9S5 CCDC18 Coiled-coil domain-containing protein 18 yes yes 0 0 1 By MS/MS 2 0 1 1 49.045 41.22 3 0.017515 57164 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 38.634 24.67 5023800 5023800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56250 2788 50561 473519 375889 375889 1 VIENPAEAQSAALEEGHAWRK Unmodified 2305.1451 0.14510769 2270 Q13322 GRB10 Growth factor receptor-bound protein 10 yes yes 0 0 1 By matching By matching By MS/MS 10 0 3 1 1 1 63.135 63.535 4 2.8704E-05 71869 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.348 39.51 20739000 0 0 0 0 0 0 0 0 5047500 0 0 6690300 0 0 9001300 56251 2270 50562 473520;473521;473522 375890 375890 1 VIENRALK Unmodified 941.56581 0.56581494 831 P06753 TPM3 Tropomyosin alpha-3 chain yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 17.9 14.384 2 0.015632 18097 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 120.46 47.418 1363400000 1059800000 221630000 81914000 0 0 0 0 0 0 0 0 0 0 0 0 56252 831 50563 473523;473524;473525;473526 375891;375892;375893 375891 1 VIENRALKDEEK Unmodified 1442.7729 0.77290718 831 P06753 TPM3 Tropomyosin alpha-3 chain yes yes 0 0 2 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 3 2 2 21.724 17.799 2;3 8.2936E-30 25806 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 218.75 114.55 560780000 259710000 61494000 239580000 0 0 0 0 0 0 0 0 0 0 0 0 56253 831 50564 473527;473528;473529;473530;473531;473532;473533 375894;375895;375896;375897;375898 375896 3 VIENRAMKDEEK Oxidation (M) 1476.7242 0.72424243 1957;853;90 CON__Q3SX28;P07951;P67936 TPM2;TPM4 Tropomyosin beta chain;Tropomyosin alpha-4 chain no no 0 1 2 By MS/MS By MS/MS 2 0 3 1 2 6.9117 4.2617 2;3 0.00013559 7325 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.08 74.566 + 233540000 22811000 0 210730000 0 0 0 0 0 0 0 0 0 0 0 0 56254 90;853;1957 50565 473534;473535;473536 375899;375900;375901;375902 375899 124 4 VIENRAMKDEEK Unmodified 1460.7293 0.72932781 1957;853;90 CON__Q3SX28;P07951;P67936 TPM2;TPM4 Tropomyosin beta chain;Tropomyosin alpha-4 chain no no 0 0 2 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 15.191 11.938 3 0.0079352 15007 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 75.739 52.063 + 350880000 154960000 108920000 87003000 0 0 0 0 0 0 0 0 0 0 0 0 56255 90;853;1957 50565 473537;473538;473539 375903 375903 0 VIEPFSR Unmodified 846.45995 0.45995289 129 O00231 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 45.678 45.847 2 0.029029 51765 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 76.035 31.062 439460000 0 0 0 13885000 40409000 46957000 17848000 0 10194000 52127000 87686000 90010000 7906900 16346000 56095000 56256 129 50566 473540;473541;473542;473543;473544;473545;473546;473547;473548;473549;473550 375904;375905;375906;375907;375908;375909 375906 6 VIEPGCVR Unmodified 928.48004 0.4800364 440 O60884 DNAJA2 DnaJ homolog subfamily A member 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 29.173 29.425 2 0.038729 31440 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 84.244 22.246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56257 440 50567 473551;473552;473553 375910;375911;375912 375912 3 VIEQLGTPCPEFMK Oxidation (M) 1663.795 0.79496453 1489 P45983;P53779 MAPK8;MAPK10 Mitogen-activated protein kinase 8;Mitogen-activated protein kinase 10 yes no 0 1 0 By MS/MS 2 0 1 1 72.453 66.726 2 0.0015157 84619 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.155 74.386 14348000 0 14348000 0 0 0 0 0 0 0 0 0 0 0 0 0 56258 1489 50568 473554 375913 375913 2339 1 VIEQLGTPSAEFMK Oxidation (M) 1564.7807 0.78069468 1490 P45984 MAPK9 Mitogen-activated protein kinase 9 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 65.305 63.994 2 7.3748E-31 80666 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 148.28 117.71 103340000 0 75345000 3540000 2954800 0 0 0 0 0 4458500 6248000 5881500 0 4915600 0 56259 1490 50569 473555;473556;473557;473558;473559;473560;473561;473562;473563;473564;473565 375914;375915;375916;375917;375918;375919;375920;375921;375922;375923 375917 2340 10 VIEQLGTPSAEFMK Unmodified 1548.7858 0.78578005 1490 P45984 MAPK9 Mitogen-activated protein kinase 9 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 78.031 74.416 2 1.397E-47 92742 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 180.88 144.55 340370000 0 337890000 2477000 0 0 0 0 0 0 0 0 0 0 0 0 56260 1490 50569 473566;473567;473568 375924;375925;375926 375924 3 VIEQLLVGLK Unmodified 1110.7012 0.70124579 4152 Q9BTW9 TBCD Tubulin-specific chaperone D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 83.023 83.122 2 0.0074048 96288 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 62.546 58.347 47741000 0 0 0 0 1351600 5394100 1482900 1972500 0 8402000 4440100 6458000 0 4069800 14170000 56261 4152 50570 473569;473570;473571;473572;473573;473574;473575;473576;473577 375927;375928;375929;375930;375931 375927 5 VIEQMGK Unmodified 803.42112 0.42112454 4655;5016 Q9NUU7;Q9UMR2 DDX19A;DDX19B ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX19B no no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 15.766 15.937 2 0.026085 15820 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 79.454 5.0384 314390000 0 0 0 16274000 12946000 33330000 21448000 17936000 0 32777000 37701000 32299000 35163000 36453000 38061000 56262 4655;5016 50571 473578;473579;473580;473581;473582;473583;473584;473585;473586;473587;473588 375932;375933;375934;375935;375936 375935 5 VIEQPIR Unmodified 853.50215 0.50215205 3663 Q92797 SYMPK Symplekin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 29.226 29.392 2 0.023371 31582 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 88.734 24.187 138300000 0 0 0 8620900 7741900 11970000 11072000 13587000 7100200 15784000 0 13397000 12779000 16642000 19605000 56263 3663 50572 473589;473590;473591;473592;473593;473594;473595;473596;473597;473598;473599 375937;375938;375939;375940;375941;375942;375943;375944;375945 375938 9 VIESEDYGQQLEIVCLIDPGCFREIDELIK Unmodified 3579.7477 0.74768657 5146 Q9Y3A5 SBDS Ribosome maturation protein SBDS yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 100.74 95.275 3 1.2638E-191 119543 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 186.56 181.12 109940000 99006000 10935000 0 0 0 0 0 0 0 0 0 0 0 0 0 56264 5146 50573 473600;473601;473602 375946;375947;375948 375948 3 VIESRAQK Unmodified 929.52943 0.52942943 884 P09493 TPM1 Tropomyosin alpha-1 chain yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 6.0906 3.1314 2 0.037501 5984 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.81 50.048 327580000 282610000 19979000 24996000 0 0 0 0 0 0 0 0 0 0 0 0 56265 884 50574 473603;473604;473605 375949 375949 0 VIESRAQKDEEK Unmodified 1430.7365 0.73652168 884 P09493 TPM1 Tropomyosin alpha-1 chain yes yes 0 0 2 By MS/MS 2 0 1 1 6.3601 4.1426 3 0.018218 5932 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 55.776 42.187 8973700 0 0 8973700 0 0 0 0 0 0 0 0 0 0 0 0 56266 884 50575 473606 375950 375950 1 VIESTQDLGNDLAGVMALQR Oxidation (M) 2145.0736 0.073582234 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 1 0 By MS/MS By matching By matching By matching 10 0 4 1 1 1 1 80.991 81.117 2 2.6062E-11 93836 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 81.431 69.071 12418000 0 0 0 0 0 0 0 0 0 4307000 0 0 1342700 1822900 4945200 56267 2047 50576 473607;473608;473609;473610 375951 375951 3331 1 VIESTQDLGNDLAGVMALQRK Unmodified 2257.1736 0.17363063 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS 2 0 1 1 90.373 85.477 3 3.248E-92 106215 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.85 115.93 59783000 0 59783000 0 0 0 0 0 0 0 0 0 0 0 0 0 56268 2047 50577 473611 375952 375952 1 VIESTQDLGNDLAGVMALQRK Oxidation (M) 2273.1685 0.16854525 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 1 1 By MS/MS 2 0 1 1 80.15 77.622 3 1.4318E-07 94189 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 72.359 63.865 7834000 0 0 7834000 0 0 0 0 0 0 0 0 0 0 0 0 56269 2047 50577 473612 375953 375953 3331 1 VIETNRENDK Unmodified 1216.6048 0.60477922 1029 P15924 DSP Desmoplakin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.89 2.72 3 1 24 2 2 2 2 2 2 2 2 2 2 2 2 2 2 6.4547 6.1682 2;3 0.0035126 4492 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 58.699 40.474 488370000 0 30740000 43483000 112290000 26692000 34387000 30989000 50400000 30700000 16717000 28571000 25532000 27090000 12692000 18085000 56270 1029 50578 473613;473614;473615;473616;473617;473618;473619;473620;473621;473622;473623;473624;473625;473626;473627;473628;473629;473630;473631;473632;473633;473634;473635;473636;473637;473638;473639;473640 375954;375955;375956;375957;375958;375959;375960;375961;375962;375963;375964 375961 10 VIETPENDFK Unmodified 1190.5819 0.58191851 4327 Q9H0G5 NSRP1 Nuclear speckle splicing regulatory protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46.705 45.87 2 1.051E-05 58478 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 151.44 123.92 336630000 4584900 145000000 0 10927000 11781000 12270000 14522000 13525000 11804000 16018000 18505000 24044000 16345000 11631000 25675000 56271 4327 50579 473641;473642;473643;473644;473645;473646;473647;473648;473649;473650;473651;473652;473653;473654 375965;375966;375967;375968;375969;375970;375971;375972;375973;375974;375975;375976;375977;375978;375979 375971 14 VIEVELAK Unmodified 899.53278 0.53278348 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 52.651 52.782 2 0.013245 59908 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 72.789 16.667 61276000 0 0 0 3554400 3108700 8276000 3921300 3147700 2969500 6394400 7204500 9004200 0 5324500 8371200 56272 5049 50580 473655;473656;473657;473658;473659;473660;473661;473662;473663;473664;473665 375980;375981;375982;375983;375984;375985;375986;375987;375988;375989 375982 10 VIFDQLVVTHK Unmodified 1297.7394 0.73942221 3992 Q96SN8 CDK5RAP2 CDK5 regulatory subunit-associated protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 80.718 72.587 3 0.0049477 95224 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.841 41.292 6205600 6205600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56273 3992 50581 473666 375990 375990 1 VIFLEDDDIAAVADGK Unmodified 1689.8461 0.8461317 588 O94808 GFPT2 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 yes yes 0 0 0 By MS/MS 10 0 1 1 85.999 86.104 2 0.016848 99813 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 47.288 33.13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56274 588 50582 473667 375991 375991 1 VIFLENYR Unmodified 1052.5655 0.56548059 828;939 P11216;P11217;P06737 PYGB;PYGM;PYGL Glycogen phosphorylase, brain form;Glycogen phosphorylase, muscle form;Glycogen phosphorylase, liver form no no 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 72.196 72.096 2 0.027721 83741 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 57.177 20.992 5820700 0 0 0 3451300 0 0 0 0 0 0 0 0 1320700 1048700 0 56275 939;828 50583 473668;473669;473670 375992 375992 1 VIFPAAEDK Unmodified 988.52295 0.52294707 2033 Q00341 HDLBP Vigilin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 48.904 48.999 2 0.0032531 55378 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 90.657 78.45 665710000 0 0 0 28885000 27750000 101600000 44734000 37889000 69417000 107070000 90878000 80103000 77381000 0 0 56276 2033 50584 473671;473672;473673;473674;473675;473676;473677;473678;473679;473680;473681 375993;375994;375995;375996;375997;375998;375999;376000;376001;376002 375995 7 VIFPAAEDKDQDLITIIGK Unmodified 2085.1358 0.13577179 2033 Q00341 HDLBP Vigilin yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 86.881 87.025 3 0.016087 100635 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 27.7 19.31 15213000 0 0 0 0 0 0 0 0 0 2940700 3783800 0 0 972560 7515600 56277 2033 50585 473682;473683;473684;473685 376003;376004 376004 2 VIFPTGDSK Unmodified 962.5073 0.50729701 1179 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 44.099 44.452 2 0.005264 48848 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 78.516 41.495 87599000 0 0 0 0 0 0 8745100 7383900 6161500 0 0 16686000 12868000 16699000 19055000 56278 1179 50586 473686;473687;473688;473689;473690;473691;473692;473693 376005;376006;376007;376008;376009;376010;376011;376012 376009 8 VIFPYEAQNDDELTIK Unmodified 1893.936 0.93600934 3754 Q96B97 SH3KBP1 SH3 domain-containing kinase-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 85.262 81.766 2 3.2292E-45 101575 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 192.68 178 169940000 0 168490000 1442400 0 0 0 0 0 0 0 0 0 0 0 0 56279 3754 50587 473694;473695;473696 376013;376014;376015 376013 3 VIFTSPIK Unmodified 903.54295 0.54295423 1451 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.39 64.481 2 0.027721 73400 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.177 13.363 108280000 0 0 0 4848500 4636800 9521000 6899800 4983200 4249000 12100000 9576300 13340000 10399000 11036000 16695000 56280 1451 50588 473697;473698;473699;473700;473701;473702;473703;473704;473705;473706;473707;473708 376016;376017;376018;376019;376020;376021;376022;376023 376022 8 VIFVDDYAVGCRK Unmodified 1540.7708 0.77079869 4584 Q9NR09 BIRC6 Baculoviral IAP repeat-containing protein 6 yes yes 0 0 1 By matching By matching By MS/MS 10 0 3 1 1 1 65.112 65.488 3 0.022291 74354 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 18.122 5.9512 8370300 0 0 0 0 0 0 0 0 0 2648700 0 1660100 0 0 4061500 56281 4584 50589 473709;473710;473711 376024 376024 1 VIFVGEDAVDAGGVRK Unmodified 1630.8679 0.8678702 2725 Q5GLZ8 HERC4 Probable E3 ubiquitin-protein ligase HERC4 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 71.007 65.047 3 0.0015229 80417 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 79.022 71.82 58634000 24005000 0 34629000 0 0 0 0 0 0 0 0 0 0 0 0 56282 2725 50590 473712;473713 376025;376026;376027 376027 2 VIGEDGQSVYK Unmodified 1193.5928 0.59281755 4897 Q9UHD2 TBK1 Serine/threonine-protein kinase TBK1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.282 34.465 2 0.0082657 38078 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.949 29.209 125170000 0 0 0 5022600 6522800 8956000 9698100 11234000 7108800 10794000 14097000 17146000 9960400 10548000 14087000 56283 4897 50591 473714;473715;473716;473717;473718;473719;473720;473721;473722;473723;473724;473725 376028 376028 1 VIGELVGHTER Unmodified 1208.6513 0.65133548 3518 Q8TEQ6 GEMIN5 Gem-associated protein 5 yes yes 0 0 0 By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.64 38.819 3 0.0089001 41521 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.299 37.64 133850000 0 0 0 5628200 5943900 9897400 7068600 6979900 5938400 13341000 15047000 18188000 11495000 11319000 23000000 56284 3518 50592 473726;473727;473728;473729;473730;473731;473732;473733;473734;473735;473736;473737 376029;376030;376031 376029 2 VIGGDDLSTLTGK Unmodified 1274.6718 0.67179615 729 P00492 HPRT1 Hypoxanthine-guanine phosphoribosyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 66.555 64.951 2 3.1642E-08 79290 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 126.67 87.649 4500500000 60922000 4063300000 26719000 15336000 10210000 16699000 13494000 12291000 9847800 18706000 48345000 45633000 12585000 38672000 107730000 56285 729 50593 473738;473739;473740;473741;473742;473743;473744;473745;473746;473747;473748;473749;473750;473751;473752;473753;473754 376032;376033;376034;376035;376036;376037;376038;376039;376040;376041;376042;376043;376044;376045;376046;376047 376043 16 VIGIDHIK Unmodified 893.53345 0.53345218 1133 P22061 PCMT1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 47.239 41.418 2 0.017927 57779 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.55 48.048 607020000 413150000 0 193860000 0 0 0 0 0 0 0 0 0 0 0 0 56286 1133 50594 473755;473756 376048;376049 376048 1 VIGIECSSISDYAVK Unmodified 1639.8127 0.81272309 4069 Q99873 PRMT1 Protein arginine N-methyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 6.1 3.91 4 1 5 1 3 1 1 1 1 1 1 77 74.936 2 2.7311E-14 86353 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 100.72 58.721 3212100000 67674000 3067200000 30154000 0 1773200 0 0 0 0 0 10853000 0 2697800 8191100 23528000 56287 4069 50595 473757;473758;473759;473760;473761;473762;473763;473764;473765;473766 376050;376051;376052;376053;376054;376055;376056;376057 376057 8 VIGLSSDLQQVGGASAR Unmodified 1656.8795 0.87949752 141 O00303 EIF3F Eukaryotic translation initiation factor 3 subunit F yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 1 2 2 2 2 2 2 2 2 2 2 71.233 71.36 2;3 3.1854E-19 81045 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 133.32 126.94 473810000 0 0 0 13132000 17818000 42844000 33618000 35145000 15368000 59842000 46782000 53251000 34360000 40517000 81131000 56288 141 50596 473767;473768;473769;473770;473771;473772;473773;473774;473775;473776;473777;473778;473779;473780;473781;473782;473783;473784;473785;473786;473787;473788 376058;376059;376060;376061;376062;376063;376064;376065;376066;376067;376068;376069;376070;376071;376072 376067 14 VIGMHYFSPVDK Unmodified 1391.6908 0.69075746 1426 P40939 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 67.111 66.025 3 0.0017952 89727 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.375 46.499 26537000 9350900 0 0 0 1584700 3494500 0 2413700 0 0 0 0 1351300 1783000 6559500 56289 1426 50597 473789;473790;473791;473792;473793;473794;473795 376073;376074 376074 2 VIGMHYFSPVDK Oxidation (M) 1407.6857 0.68567208 1426 P40939 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 0 1 0 By MS/MS 2 0 1 1 61.307 53.051 3 0.012121 71879 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.991 26.824 6571700 6571700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56290 1426 50597 473796 376075 376075 2246 1 VIGMPPPVFYWK Oxidation (M) 1448.7526 0.75262943 3134 Q86TC9 MYPN Myopalladin yes yes 0 1 0 By matching By MS/MS 10 0 2 1 1 85.766 85.891 2 0.0028424 99336 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.96 41.953 14421000 0 0 0 0 0 0 0 0 0 0 0 0 3033400 0 11388000 56291 3134 50598 473797;473798 376076 376076 4759 1 VIGNGSFGVVYQAK Unmodified 1437.7616 0.76161421 1605 P49841 GSK3B Glycogen synthase kinase-3 beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 74.928 68.285 2 0.00014203 88928 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 123.79 108.64 35620000 15194000 20425000 0 0 0 0 0 0 0 0 0 0 0 0 0 56292 1605 50599 473799;473800;473801 376077;376078;376079 376078 3 VIGNQSLVNELAFTAR Unmodified 1730.9315 0.93153309 2223 Q13011 ECH1 Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial yes yes 0 0 0 By MS/MS 10 0 1 1 84.698 84.877 2 3.1542E-10 97992 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 92.856 77.484 6899100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6899100 56293 2223 50600 473802 376080 376080 1 VIGNQSLVNELAFTARK Unmodified 1859.0265 0.026496107 2223 Q13011 ECH1 Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial yes yes 0 0 1 By MS/MS 2 0 1 1 86.267 78.136 3 6.4852E-05 101891 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.231 54.638 9995300 9995300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56294 2223 50601 473803 376081 376081 1 VIGQDSSEIHFK Unmodified 1358.683 0.68302954 1942 P63165;G2XKQ0 SUMO1 Small ubiquitin-related modifier 1;Small ubiquitin-related modifier yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.39 3.7 5 1 12 2 2 2 1 1 1 1 1 1 1 1 1 1 1 1 47.684 46.317 3 1.5025E-05 51667 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 87.001 80.341 2093700000 72161000 891010000 499430000 27590000 23326000 45744000 33126000 40033000 24094000 45310000 56912000 78461000 66230000 60185000 130050000 56295 1942 50602 473804;473805;473806;473807;473808;473809;473810;473811;473812;473813;473814;473815;473816;473817;473818;473819;473820;473821 376082;376083;376084;376085;376086;376087;376088;376089;376090;376091;376092;376093;376094;376095 376088 11 VIGSELVQK Unmodified 971.56515 0.56514624 1369 P35998 PSMC2 26S protease regulatory subunit 7 yes yes 0 0 0 By MS/MS 10 0 1 1 42.797 42.269 2 0.0043077 48001 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 87.251 23.95 158150000 0 0 0 158150000 0 0 0 0 0 0 0 0 0 0 0 56296 1369 50603 473822 376096 376096 1 VIGSGCNLDSAR Unmodified 1247.5928 0.59283433 719;836 P00338;Q6ZMR3;P07864;P07195 LDHA;LDHAL6A;LDHC;LDHB L-lactate dehydrogenase A chain;L-lactate dehydrogenase A-like 6A;L-lactate dehydrogenase C chain;L-lactate dehydrogenase B chain no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.509 31.696 2 5.9124E-06 33093 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.38 71.077 1045300000 0 0 0 19110000 17425000 12874000 12154000 10444000 8212200 15258000 168000000 175610000 13455000 162530000 430270000 56297 719;836 50604 473823;473824;473825;473826;473827;473828;473829;473830;473831;473832;473833;473834 376097;376098;376099;376100;376101;376102;376103;376104;376105;376106;376107;376108;376109 376100 12 VIGSNFAPTVERDEFLVAEK Unmodified 2220.1426 0.14264808 3787 Q96CW5 TUBGCP3 Gamma-tubulin complex component 3 yes yes 0 0 1 By matching By MS/MS By MS/MS 10 0 3 1 1 1 81.019 81.184 3 2.8396E-07 93606 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.928 53.913 28677000 0 0 0 0 0 0 0 0 3688200 7578000 0 0 0 0 17411000 56298 3787 50605 473835;473836;473837 376110;376111 376111 2 VIGTLLGTVDK Unmodified 1114.6598 0.65977491 141 O00303 EIF3F Eukaryotic translation initiation factor 3 subunit F yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.473 71.544 2 0.00026047 82315 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 91.658 58.818 589480000 0 0 0 23306000 30008000 52703000 31924000 32100000 23633000 64117000 60504000 70025000 48579000 59327000 93251000 56299 141 50606 473838;473839;473840;473841;473842;473843;473844;473845;473846;473847;473848;473849 376112;376113;376114;376115;376116;376117;376118;376119;376120;376121;376122;376123 376112 12 VIHDNFGIVEGLMTTVHAITATQK Oxidation (M) 2610.3476 0.34757225 782 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 0 1 0 By MS/MS 2.67 0.471 2 4 6 97.101 93.345 3;4 1.5208E-97 110567 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 149.32 143.25 186710000 0 186710000 0 0 0 0 0 0 0 0 0 0 0 0 0 56300 782 50607 473850;473851;473852;473853;473854;473855 376124;376125;376126;376127;376128;376129;376130 376126 945 7 VIHDNFGIVEGLMTTVHAITATQK Unmodified 2594.3527 0.35265763 782 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 4 4 7 1 100.45 96.687 3;4 1.0015E-97 120376 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 152.07 143.05 306030000 0 304800000 1231800 0 0 0 0 0 0 0 0 0 0 0 0 56301 782 50607 473856;473857;473858;473859;473860;473861;473862;473863 376131;376132;376133;376134;376135;376136;376137;376138;376139;376140 376133 9 VIHLSNLPHSGYSDSAVLK Unmodified 2036.0691 0.069089203 1473 P43243 MATR3 Matrin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 29 2 2 2 3 2 4 3 3 3 2 3 66.584 66.764 2;3;4 3.5368E-38 75605 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 113.65 93.45 2388200000 0 0 0 0 19645000 229540000 41705000 170620000 209460000 184760000 139520000 333120000 148130000 166800000 744860000 56302 1473 50608 473864;473865;473866;473867;473868;473869;473870;473871;473872;473873;473874;473875;473876;473877;473878;473879;473880;473881;473882;473883;473884;473885;473886;473887;473888;473889;473890;473891;473892 376141;376142;376143;376144;376145;376146;376147;376148;376149;376150;376151;376152;376153;376154;376155;376156;376157;376158;376159;376160;376161;376162 376147 18 VIHSELQGGNK Unmodified 1180.62 0.62003536 2995 Q6YHK3 CD109 CD109 antigen yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 12.948 13.103 3 0.0089187 12417 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 33.039 16.462 90774000 0 0 0 4641500 7438900 5495600 5848300 0 6012700 8342600 8353700 12742000 12404000 8346700 11148000 56303 2995 50609 473893;473894;473895;473896;473897;473898;473899;473900;473901;473902;473903 376163;376164;376165;376166;376167;376168 376167 5 VIHSILNSPYAK Unmodified 1340.7452 0.74523587 1152 P23258;Q9NRH3 TUBG1;TUBG2 Tubulin gamma-1 chain;Tubulin gamma-2 chain yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 53.052 53.17 3 1.6506E-05 58237 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.632 67.789 493930000 0 0 0 31067000 29738000 45086000 41914000 47268000 35351000 59272000 0 60022000 38712000 33856000 71644000 56304 1152 50610 473904;473905;473906;473907;473908;473909;473910;473911;473912;473913;473914 376169;376170;376171;376172;376173;376174;376175;376176;376177 376171 4 VIHVESGK Unmodified 867.48142 0.48141661 1656 P51532 SMARCA4 Transcription activator BRG1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 9.5086 9.1771 2 0.032465 11841 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 104.75 63.244 132930000 0 51982000 67210000 1418200 1023900 1150000 1546000 1020800 1074400 922320 0 2443200 1091800 670170 1375100 56305 1656 50611 473915;473916;473917;473918;473919;473920;473921;473922;473923;473924;473925;473926;473927 376178;376179 376179 1 VIHVVTSEMDNYEPGVYTEK Oxidation (M) 2325.0835 0.083478218 1340 P35221 CTNNA1 Catenin alpha-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 60.436 60.611 3 3.2207E-38 69118 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 110.74 108.58 223490000 0 0 0 0 13039000 22688000 22589000 15888000 18299000 28450000 26354000 33120000 0 16950000 26113000 56306 1340 50612 473928;473929;473930;473931;473932;473933;473934;473935;473936;473937 376180;376181;376182;376183;376184;376185;376186;376187;376188;376189;376190;376191;376192;376193;376194 376182 2032 15 VIHVVTSEMDNYEPGVYTEK Unmodified 2309.0886 0.088563596 1340 P35221 CTNNA1 Catenin alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 71.372 71.507 3 4.4471E-08 81568 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.986 67.034 118810000 0 0 0 0 3211900 12260000 4097800 6619300 6204000 15001000 14878000 13288000 0 9367500 33877000 56307 1340 50612 473938;473939;473940;473941;473942;473943;473944;473945;473946;473947 376195;376196;376197;376198;376199;376200;376201;376202;376203;376204 376198 10 VIIAHTETK Unmodified 1010.576 0.57604528 2435 Q14689 DIP2A Disco-interacting protein 2 homolog A yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 20.595 16.886 2 0.014026 21202 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 82.452 60.321 20940000 14242000 0 6697700 0 0 0 0 0 0 0 0 0 0 0 0 56308 2435 50613 473948;473949 376205 376205 1 VIIATPGR Unmodified 825.50724 0.50723743 2769 Q5T1V6 DDX59 Probable ATP-dependent RNA helicase DDX59 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 38.38 38.491 2 0.027721 43154 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 57.177 31.559 28355000 0 0 0 0 3953200 6069200 4988500 3208600 0 4541100 0 0 0 0 5594900 56309 2769 50614 473950;473951;473952;473953;473954;473955 376206;376207 376207 2 VIIDTLITK Unmodified 1014.6325 0.63249752 261 O15164 TRIM24 Transcription intermediary factor 1-alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 75.274 74.134 2 0.0059097 84479 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 76.478 50.584 227650000 24970000 60868000 10560000 6132300 8131000 10821000 8414500 11891000 9078700 13538000 11507000 13359000 9080100 10555000 18744000 56310 261 50615 473956;473957;473958;473959;473960;473961;473962;473963;473964;473965;473966;473967;473968;473969;473970;473971 376208;376209;376210;376211;376212;376213;376214;376215;376216;376217;376218;376219;376220;376221;376222 376219 15 VIIIGSGVSGLAAAR Unmodified 1382.8245 0.82454882 397 O60341 KDM1A Lysine-specific histone demethylase 1A yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.192 79.257 2 0.00033188 90730 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 66.262 17.466 156600000 0 0 0 2996900 7993600 0 9004400 9870000 9104700 17537000 23117000 19620000 10506000 16462000 30393000 56311 397 50616 473972;473973;473974;473975;473976;473977;473978;473979;473980;473981;473982 376223;376224;376225;376226;376227;376228;376229;376230 376227 8 VIILGDSGVGK Unmodified 1056.6179 0.61791009 1647 P51149 RAB7A Ras-related protein Rab-7a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.12 3 13 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 59.901 58.82 2 4.7881E-05 67129 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 115.71 53.752 2749300000 29006000 342220000 19522000 109140000 113910000 151550000 178990000 202820000 155440000 223210000 298000000 283480000 160610000 183890000 297480000 56312 1647 50617 473983;473984;473985;473986;473987;473988;473989;473990;473991;473992;473993;473994;473995;473996;473997;473998 376231;376232;376233;376234;376235;376236;376237;376238;376239;376240;376241;376242;376243;376244;376245;376246;376247;376248 376232 16 VIILSLDR Unmodified 927.57532 0.57531699 1974 P78344 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.26 74.323 2 0.006213 85401 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 102.77 63.555 156760000 0 0 0 7362200 10272000 9805000 12778000 10764000 10931000 16709000 12928000 21627000 12103000 13927000 17554000 56313 1974 50618 473999;474000;474001;474002;474003;474004;474005;474006;474007;474008;474009;474010 376249;376250;376251;376252;376253;376254;376255;376256;376257 376256 9 VIILSLDRSDEDK Unmodified 1501.7988 0.79878758 1974 P78344 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 2 24 1 1 2 2 2 2 2 2 2 2 2 2 2 2 65.651 65.282 2;3 3.4197E-21 73812 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 165.66 136.32 1768700000 72352000 0 4460400 58272000 68008000 145550000 100540000 92014000 138950000 133650000 138710000 248930000 137220000 149480000 280530000 56314 1974 50619 474011;474012;474013;474014;474015;474016;474017;474018;474019;474020;474021;474022;474023;474024;474025;474026;474027;474028;474029;474030;474031;474032;474033;474034;474035;474036 376258;376259;376260;376261;376262;376263;376264;376265;376266;376267;376268;376269;376270;376271;376272;376273;376274;376275;376276;376277;376278;376279;376280;376281;376282;376283;376284;376285;376286;376287;376288;376289;376290;376291;376292;376293;376294;376295 376271 32 VIIMILNGEK Oxidation (M) 1144.6526 0.65258104 1720 P53618 COPB1 Coatomer subunit beta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.586 72.654 2 0.0038187 83533 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 67.507 36.218 85276000 0 0 0 3766200 4053300 9874800 4085900 4204100 4394700 11438000 10467000 11342000 6388300 7216300 8045600 56315 1720 50620 474037;474038;474039;474040;474041;474042;474043;474044;474045;474046;474047;474048 376296;376297;376298;376299;376300;376301;376302;376303;376304;376305;376306;376307;376308;376309;376310 376297 2795 15 VIIMILNGEK Unmodified 1128.6577 0.65766642 1720 P53618 COPB1 Coatomer subunit beta yes yes 0 0 0 By MS/MS 10 0 1 1 79.257 79.372 2 0.027036 90902 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 58.981 26.661 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56316 1720 50620 474049 376311 376311 1 VIISAPSADAPMFVMGVNHEK 2 Oxidation (M) 2244.0919 0.091874835 782 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 74.294 74.395 3 5.2236E-10 85195 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.057 72.702 880790000 0 0 0 54325000 0 0 0 34013000 0 0 157510000 190390000 0 70498000 374060000 56317 782 50621 474050;474051;474052;474053;474054;474055 376312;376313;376314;376315;376316;376317 376312 941;942 6 VIISAPSADAPMFVMGVNHEK Oxidation (M) 2228.097 0.096960213 782 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 2 1 2 1 2 79.02 79.118 3 2.5691E-06 90844 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.747 56.13 368570000 0 0 0 3332800 0 0 0 0 0 0 46026000 29203000 6238700 16759000 267020000 56318 782 50621 474056;474057;474058;474059;474060;474061;474062;474063;474064 376318;376319;376320;376321 376318 941;942 3 VIISAPSADAPMFVMGVNHEK Unmodified 2212.102 0.10204559 782 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 83.715 83.891 3 5.9401E-21 96766 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.776 90.767 119400000 0 0 0 0 0 0 0 0 0 0 7961600 8278500 0 0 103160000 56319 782 50621 474065;474066;474067 376322;376323;376324;376325 376322 3 VIISDIDGTITR Unmodified 1301.7191 0.7190807 2438 Q14693 LPIN1 Phosphatidate phosphatase LPIN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 71.173 71.308 2 0.0064992 81059 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 51.268 30.397 35734000 0 0 0 0 2461600 3223300 2587000 3116000 1665500 4006200 3609200 5114800 2736600 2085900 5128000 56320 2438 50622 474068;474069;474070;474071;474072;474073;474074;474075;474076;474077;474078 376326;376327;376328;376329;376330 376328 5 VIITNFPAAK Unmodified 1072.6281 0.62808085 1528 P47897 QARS Glutamine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 64.243 64.314 2 0.0026685 73233 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 81.296 40.35 230310000 0 0 0 15351000 13375000 24438000 18469000 16885000 0 0 27612000 31636000 0 25352000 57187000 56321 1528 50623 474079;474080;474081;474082;474083;474084;474085;474086;474087 376331;376332;376333;376334;376335;376336;376337 376335 5 VIIVGLDNAGK Unmodified 1097.6445 0.64445919 3906 Q96KC2 ARL5B ADP-ribosylation factor-like protein 5B no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.554 64.643 2 0.0029539 73852 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 65.305 48.529 77542000 0 0 0 4351200 4434900 6247900 5548600 6280500 3884300 7479300 9101300 7696800 5851200 5389800 11277000 56322 3906 50624 474088;474089;474090;474091;474092;474093;474094;474095;474096;474097;474098;474099 376338;376339;376340;376341;376342;376343;376344;376345;376346;376347;376348;376349;376350 376339 12 VIIWREENGTWEK Unmodified 1658.8417 0.84165545 1769 P55735 SEC13 Protein SEC13 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 64.379 64.618 3 0.0026494 73073 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.006 27.314 55385000 0 0 0 0 0 3489100 0 3062800 2832100 2977000 5362400 6114300 3405000 4455700 23687000 56323 1769 50625 474100;474101;474102;474103;474104;474105;474106;474107;474108 376351;376352 376351 2 VIIYQEK Unmodified 891.50657 0.50656873 4912 Q9UHX1 PUF60 Poly(U)-binding-splicing factor PUF60 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.736 32.921 2 0.019328 35191 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 110.34 68.685 2338100000 0 0 0 179950000 92519000 123830000 139050000 138000000 119960000 244020000 247200000 313850000 187630000 204290000 347810000 56324 4912 50626 474109;474110;474111;474112;474113;474114;474115;474116;474117;474118;474119;474120 376353;376354;376355;376356;376357;376358;376359;376360 376358 6 VILAGNLLSHSTQSR Unmodified 1594.8791 0.87910359 1556 P49005 POLD2 DNA polymerase delta subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 1 2 2 2 2 2 2 2 1 2 2 65.859 65.97 2;3 8.0339E-23 74639 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 119.76 107.9 251820000 0 0 0 10817000 6894100 20446000 12147000 19148000 13271000 18960000 17764000 28851000 14653000 23335000 65535000 56325 1556 50627 474121;474122;474123;474124;474125;474126;474127;474128;474129;474130;474131;474132;474133;474134;474135;474136;474137;474138;474139;474140;474141;474142 376361;376362;376363;376364;376365;376366;376367;376368;376369;376370;376371;376372;376373;376374;376375;376376;376377;376378;376379;376380;376381;376382 376368 19 VILASPETSSAK Unmodified 1201.6554 0.65541781 1559 P49116 NR2C2 Nuclear receptor subfamily 2 group C member 2 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By matching 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 39.581 39.321 2 0.0027374 42597 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 62.303 42.516 148770000 0 81113000 0 3026300 5387600 6743600 4261900 6450100 0 7759300 5958000 8855400 5084300 4981800 9147100 56326 1559 50628 474143;474144;474145;474146;474147;474148;474149;474150;474151;474152;474153;474154 376383;376384;376385 376385 3 VILDEGHAIR Unmodified 1121.6193 0.61930707 2411 Q14527 HLTF Helicase-like transcription factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 39.366 39.632 2 0.0052248 43303 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 69.812 36.919 30940000 0 0 0 0 0 4223500 3499700 0 3412100 4967900 7966800 6869900 0 0 0 56327 2411 50629 474155;474156;474157;474158;474159;474160 376386;376387;376388 376388 3 VILDEGHAIRNPNAQQTK Unmodified 2003.0548 0.054836123 2411 Q14527 HLTF Helicase-like transcription factor yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 39.047 39.227 3;4 7.5114E-71 43697 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 165.16 141.48 2033300000 0 0 0 71887000 106020000 149030000 138820000 112380000 113850000 142310000 261950000 298230000 238760000 170990000 229050000 56328 2411 50630 474161;474162;474163;474164;474165;474166;474167;474168;474169;474170;474171;474172;474173;474174;474175;474176;474177;474178;474179;474180;474181;474182;474183;474184 376389;376390;376391;376392;376393;376394;376395;376396;376397;376398;376399;376400;376401;376402;376403;376404;376405;376406;376407;376408;376409;376410;376411 376404 19 VILDGNSLEK Unmodified 1086.5921 0.59208927 3369 Q8N8N7 PTGR2 Prostaglandin reductase 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 52.309 47.453 2 0.0052499 61572 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.205 52.827 328890000 0 326450000 2445200 0 0 0 0 0 0 0 0 0 0 0 0 56329 3369 50631 474185;474186 376412 376412 1 VILDLEEERQR Unmodified 1398.7467 0.74669243 4812 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 52.152 52.36 3 0.007044 58963 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 49.5 28.66 66721000 0 0 0 0 5435600 0 0 0 0 16737000 9300200 15618000 10815000 8814600 0 56330 4812 50632 474187;474188;474189;474190;474191;474192 376413;376414;376415;376416;376417 376413 5 VILDLTPNYR Unmodified 1202.6659 0.66592292 860 P08195 SLC3A2 4F2 cell-surface antigen heavy chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 75.257 75.283 2 0.0045188 86910 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 72.547 52.761 121660000 0 0 0 6392100 9681300 13993000 8838700 11806000 9599400 14781000 13783000 19709000 13081000 0 0 56331 860 50633 474193;474194;474195;474196;474197;474198;474199;474200;474201;474202 376418;376419;376420;376421;376422;376423;376424;376425;376426 376426 7 VILDYNTAHNK Unmodified 1286.6619 0.66190017 2401 Q14258 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.47 1 5 1 21 3 2 2 2 2 2 1 1 1 2 2 2 2 2 2 37.125 35.499 2;3 6.2623E-05 45422 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 106.29 93.714 1506600000 844310000 45375000 257940000 27307000 15314000 33174000 19188000 21876000 17000000 40516000 35395000 23806000 29738000 33989000 61679000 56332 2401 50634 474203;474204;474205;474206;474207;474208;474209;474210;474211;474212;474213;474214;474215;474216;474217;474218;474219;474220;474221;474222;474223;474224;474225;474226;474227;474228;474229;474230 376427;376428;376429;376430;376431;376432;376433;376434;376435;376436;376437;376438;376439;376440;376441 376435 14 VILEIDNAR Unmodified 1041.5819 0.58185893 73;981;76 CON__P13646-1;CON__P19012;P19012;P13646;CON__ENSEMBL:ENSP00000377550 KRT15;KRT13 Keratin, type I cytoskeletal 15;Keratin, type I cytoskeletal 13 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 2 2 2 1 57.482 57.58 2 0.00034935 63089 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 147.52 101.09 + 701760000 0 0 0 63062000 22520000 9911400 187270000 223830000 8967900 13792000 19118000 62643000 58312000 15978000 16357000 56333 73;76;981 50635 474231;474232;474233;474234;474235;474236;474237;474238;474239;474240;474241;474242;474243;474244;474245;474246;474247;474248;474249;474250;474251;474252;474253 376442;376443;376444;376445;376446;376447;376448;376449;376450;376451;376452;376453;376454;376455;376456;376457 376454 16 VILESEVIAEAVGVK Unmodified 1554.8869 0.88687431 265 O15226 NKRF NF-kappa-B-repressing factor yes yes 0 0 0 By MS/MS 2 0 1 1 94.003 85.873 2 0.00081182 111172 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.363 69.499 5221900 5221900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56334 265 50636 474254 376458 376458 1 VILGEDREATGVLLSIDGEDGIVRMDLDEQLK Unmodified 3497.7923 0.79232858 136 O00267 SUPT5H Transcription elongation factor SPT5 yes yes 0 0 2 By MS/MS 2.5 0.5 1 1 2 97.033 91.215 4 6.3525E-19 115456 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.492 65.626 28638000 28638000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56335 136 50637 474255;474256 376459;376460;376461 376461 3 VILGEDREATGVLLSIDGEDGIVRMDLDEQLK Oxidation (M) 3513.7872 0.7872432 136 O00267 SUPT5H Transcription elongation factor SPT5 yes yes 0 1 2 By MS/MS 2 0 1 1 96.522 88.392 4 1.503E-09 114262 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.149 41.243 11160000 11160000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56336 136 50637 474257 376462 376462 188 0 VILGSEAAQQHPEEVR Unmodified 1761.901 0.90096124 4737 Q9NY33 DPP3 Dipeptidyl peptidase 3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 42.02 42.473 3 0.00018578 46958 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 51.495 33.989 79130000 0 0 0 0 0 1983300 0 0 0 0 11208000 11164000 0 10799000 43975000 56337 4737 50638 474258;474259;474260;474261;474262 376463;376464;376465 376465 3 VILHSSSGNK Unmodified 1040.5615 0.56145784 28 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 11.096 7.9417 2 6.5017E-05 12478 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 123.35 100.28 209940000 169990000 21316000 18625000 0 0 0 0 0 0 0 0 0 0 0 0 56338 28 50639 474263;474264;474265 376466;376467;376468;376469;376470 376468 5 VILIQEQLSK Unmodified 1169.702 0.70197407 4689 Q9NW08 POLR3B DNA-directed RNA polymerase III subunit RPC2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 67.774 66.917 2 0.011135 76716 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 54.776 29.217 59003000 7657900 0 2123600 932390 3635300 4918800 4314200 2450300 4380400 6071100 7374300 0 3172000 4376900 7596100 56339 4689 50640 474266;474267;474268;474269;474270;474271;474272;474273;474274;474275;474276;474277;474278 376471;376472;376473;376474;376475;376476;376477;376478;376479;376480 376476 10 VILLDPSIIEAK Unmodified 1309.7857 0.7857037 2137 Q07617 SPAG1 Sperm-associated antigen 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 88.238 87.589 2 0.00095704 101670 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 72.006 52.735 174000000 0 70586000 2414800 4003500 4915300 7164000 7414300 8214400 6829300 11412000 11896000 6729800 5758400 6032000 20626000 56340 2137 50641 474279;474280;474281;474282;474283;474284;474285;474286;474287;474288;474289;474290;474291;474292;474293 376481;376482;376483;376484;376485;376486;376487;376488;376489;376490;376491;376492;376493;376494;376495;376496;376497 376494 17 VILLDVAR Unmodified 897.56475 0.56475231 4370 Q9H2M9 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.62 71.693 2 0.011381 82551 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 77.058 38.239 121530000 0 0 0 4258200 5733300 11343000 7122300 7336600 5970800 14616000 10643000 15871000 12054000 10171000 16412000 56341 4370 50642 474294;474295;474296;474297;474298;474299;474300;474301;474302;474303;474304;474305 376498;376499;376500;376501;376502;376503;376504;376505;376506 376498 9 VILLGDGGVGK Unmodified 1026.6073 0.6073454 1648 P51151;Q9NP90 RAB9A;RAB9B Ras-related protein Rab-9A;Ras-related protein Rab-9B yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 62.934 61.592 2 1.9652E-05 79300 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.89 54.41 1128900000 16356000 175680000 10400000 44419000 48085000 59824000 69970000 72899000 50984000 89306000 111350000 126440000 78079000 69792000 105360000 56342 1648 50643 474306;474307;474308;474309;474310;474311;474312;474313;474314;474315;474316;474317;474318;474319;474320;474321 376507;376508;376509;376510;376511;376512;376513;376514;376515;376516;376517;376518;376519;376520;376521;376522;376523;376524 376512 14 VILMSATLNAEK Unmodified 1288.7061 0.70607317 4373 Q9H2U1 DHX36 ATP-dependent RNA helicase DHX36 yes yes 0 0 0 By MS/MS 2 0 1 1 76.954 68.824 2 2.7686E-10 90778 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 125.97 94.74 19372000 19372000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56343 4373 50644 474322 376525 376525 1 VILNPVNTNLSK Unmodified 1310.7558 0.75580056 4576 Q9NQT8 KIF13B Kinesin-like protein KIF13B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64.716 63.784 2 0.0027374 73294 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 62.303 35.188 86208000 8771800 17871000 0 5173800 3671700 4663000 3900200 3618400 3131400 5357100 6107600 6947500 3635300 5540300 7819100 56344 4576 50645 474323;474324;474325;474326;474327;474328;474329;474330;474331;474332;474333;474334;474335;474336 376526;376527;376528;376529;376530;376531;376532;376533;376534;376535;376536;376537;376538 376535 12 VILPDDVR Unmodified 925.52328 0.52328142 2677 Q3YEC7 RABL6 Rab-like protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.702 69.778 2 0.025549 81043 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 58.604 37.905 347130000 0 0 0 25511000 25639000 24083000 28018000 22828000 26900000 31617000 37214000 44653000 24531000 24745000 31395000 56345 2677 50646 474337;474338;474339;474340;474341;474342;474343;474344;474345;474346;474347;474348 376539 376539 1 VILTSPLIRDELEK Unmodified 1624.94 0.93997251 3991 Q96SI9 STRBP Spermatid perinuclear RNA-binding protein yes yes 0 0 1 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 78.261 78.417 3 0.045322 90264 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 27.672 20.466 27236000 0 0 0 0 0 0 1079600 0 3247800 5117300 3405700 0 2724500 3663300 7997500 56346 3991 50647 474349;474350;474351;474352;474353;474354;474355 376540 376540 1 VILVQEAGK Unmodified 955.57023 0.57023162 4455 Q9H8V3 ECT2 Protein ECT2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 39.776 40.178 2 0.02741 44850 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 49.418 12.443 132080000 0 0 0 0 0 0 15729000 0 0 19231000 21887000 19860000 20319000 13361000 21692000 56347 4455 50648 474356;474357;474358;474359;474360;474361;474362 376541;376542 376542 2 VILVQEAGKQEELIK Unmodified 1695.9771 0.9770863 4455 Q9H8V3 ECT2 Protein ECT2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 65.68 65.783 3 0.040944 75260 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 33.842 27.404 30864000 0 0 0 0 2673300 0 4702400 4533900 0 5444100 0 7663600 3675100 2172100 0 56348 4455 50649 474363;474364;474365;474366;474367;474368;474369 376543 376543 0 VIMDALDER Unmodified 1060.5223 0.52229515 2370 Q14134 TRIM29 Tripartite motif-containing protein 29 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 54.861 54.896 2 0.009035 61808 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 67.897 44.469 96789000 0 0 0 6912400 5113300 0 0 9088100 0 0 25412000 21163000 0 29100000 0 56349 2370 50650 474370;474371;474372;474373;474374;474375 376544;376545 376545 2 VIMDALDER Oxidation (M) 1076.5172 0.51720977 2370 Q14134 TRIM29 Tripartite motif-containing protein 29 yes yes 0 1 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 37.327 37.332 2 0.025631 41766 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 44.753 25.239 43497000 0 0 0 9124100 4815800 2119900 7301300 9223800 0 0 0 10913000 0 0 0 56350 2370 50650 474376;474377;474378;474379;474380;474381 376546 376546 3857 1 VIMDALDERAK Unmodified 1259.6544 0.65437195 2370 Q14134 TRIM29 Tripartite motif-containing protein 29 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 53.529 48.654 3 0.015141 60025 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 70.942 55.052 60223000 0 45134000 15089000 0 0 0 0 0 0 0 0 0 0 0 0 56351 2370 50651 474382;474383;474384 376547;376548;376549 376548 2 VIMDALDERAK Oxidation (M) 1275.6493 0.64928657 2370 Q14134 TRIM29 Tripartite motif-containing protein 29 yes yes 0 1 1 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 34.871 30.932 3 0.0090457 38998 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 58.511 37.723 12595000 0 5779900 6815300 0 0 0 0 0 0 0 0 0 0 0 0 56352 2370 50651 474385;474386 376550;376551 376551 3857 2 VIMDYESLEK Oxidation (M) 1241.585 0.58495498 728 P00491 PNP Purine nucleoside phosphorylase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.9 3.81 3 1 6 1 2 1 1 1 1 1 1 1 49.423 47.26 2 5.649E-05 57512 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 123.35 108.69 800250000 33443000 686720000 13832000 11138000 2301000 0 0 0 0 0 10200000 11404000 0 11178000 20036000 56353 728 50652 474387;474388;474389;474390;474391;474392;474393;474394;474395;474396 376552;376553;376554;376555;376556;376557;376558;376559 376556 879 7 VIMDYESLEK Unmodified 1225.59 0.59004036 728 P00491 PNP Purine nucleoside phosphorylase yes yes 0 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 3 1 67.463 62.409 2 0.00012254 80434 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.12 56.639 2171900000 0 2148200000 23782000 0 0 0 0 0 0 0 0 0 0 0 0 56354 728 50652 474397;474398;474399;474400 376560;376561;376562;376563 376561 3 VIMITGDNK Unmodified 989.52157 0.52156686 1041 P16615;O14983 ATP2A2;ATP2A1 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 yes no 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 39.338 39.348 2 0.0091747 43664 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 67.494 30.335 29796000 0 0 0 4742800 0 4873500 3796300 8294400 0 0 0 0 0 8089300 0 56355 1041 50653 474401;474402;474403;474404;474405;474406;474407;474408 376564;376565;376566;376567 376566 4 VIMITGDNK Oxidation (M) 1005.5165 0.51648149 1041 P16615;O14983 ATP2A2;ATP2A1 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 yes no 0 1 0 By MS/MS 10 0 1 1 33.624 34.094 2 0.030973 37009 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 42.835 8.6487 117460000 0 0 0 0 0 0 0 0 0 0 117460000 0 0 0 0 56356 1041 50653 474409 376568 376568 1 VIMPLGSK Unmodified 843.48881 0.48881017 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 49.426 49.669 2 0.033366 56487 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 53.754 43.448 102740000 0 0 0 0 7492400 10720000 7605700 0 0 10371000 12257000 11513000 12567000 12526000 17692000 56357 3443 50654 474410;474411;474412;474413;474414;474415;474416;474417;474418 376569 376569 1 VIMSEFSADPAGQGQGQQK Unmodified 1976.9262 0.92618971 1 A0A0B4J2F2;P57059 LOC102724428;SIK1 Serine/threonine-protein kinase SIK1 yes no 0 0 0 By MS/MS 2 0 1 1 65.88 59.962 2 1.4346E-05 76775 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.169 76.602 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56358 1 50655 474419 376570 376570 1 VIMVGSGGVGK Unmodified 1002.5532 0.55320134 940;941 P11233;P11234 RALA;RALB Ras-related protein Ral-A;Ras-related protein Ral-B no no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.878 42.055 2 0.0069617 47075 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 55.235 23.3 150960000 0 0 0 10119000 8697900 9917300 9306200 8660700 6652500 19117000 17733000 19989000 12201000 10242000 18323000 56359 940;941 50656 474420;474421;474422;474423;474424;474425;474426;474427;474428;474429;474430;474431 376571;376572;376573;376574;376575;376576;376577;376578 376573 8 VIMVTGDHPITAK Oxidation (M) 1396.7384 0.73843593 792;1109 P05023;P13637;P50993;Q13733;P54707;P20648 ATP1A1;ATP1A3;ATP1A2;ATP1A4;ATP12A;ATP4A Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-3;Sodium/potassium-transporting ATPase subunit alpha-2;Sodium/potassium-transporting ATPase subunit alpha-4;Potassium-transporting ATPase alpha chain 2;Potassium-transporting ATPase alpha chain 1 no no 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 46.064 41.397 3 0.0061958 51845 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 48.112 39.382 34177000 0 21476000 12701000 0 0 0 0 0 0 0 0 0 0 0 0 56360 792;1109 50657 474432;474433 376579;376580 376580 957 2 VIMVTGDHPITAK Unmodified 1380.7435 0.74352131 792;1109 P05023;P13637;P50993;Q13733;P54707;P20648 ATP1A1;ATP1A3;ATP1A2;ATP1A4;ATP12A;ATP4A Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-3;Sodium/potassium-transporting ATPase subunit alpha-2;Sodium/potassium-transporting ATPase subunit alpha-4;Potassium-transporting ATPase alpha chain 2;Potassium-transporting ATPase alpha chain 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 49.714 48.027 3 0.0048513 66800 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.199 44.356 136510000 89685000 0 18627000 0 4967800 0 5211300 0 4832600 6779100 6405900 0 0 0 0 56361 792;1109 50657 474434;474435;474436;474437;474438;474439;474440 376581;376582;376583 376582 3 VINAAHSFYNGTTTLPISDEDRTPR Unmodified 2774.3624 0.36237069 1612 P49915 GMPS GMP synthase [glutamine-hydrolyzing] yes yes 0 0 1 By matching By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 71.864 72.117 4 1.5785E-12 82486 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.109 54.533 40101000 0 0 0 0 0 0 0 2896600 0 7498000 4445800 6513100 0 0 18747000 56362 1612 50658 474441;474442;474443;474444;474445 376584;376585 376585 2 VINAAHSFYNGTTTLPISDEDRTPRK Unmodified 2902.4573 0.45733371 1612 P49915 GMPS GMP synthase [glutamine-hydrolyzing] yes yes 0 0 2 By MS/MS By matching By MS/MS 10 0 3 1 1 1 65.825 66.135 5 0.00027714 74889 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 28.93 17.513 36439000 0 0 0 0 0 8543500 0 0 0 0 0 4698200 0 0 23197000 56363 1612 50659 474446;474447;474448 376586 376586 1 VINDKHDDVMAK Oxidation (M) 1399.6766 0.67656396 4011 Q99460 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 1 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 7.9092 8.055 3 0.0020492 5650 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 52.576 32.372 81192000 0 0 0 6424000 0 1759500 4094300 3005600 0 0 32430000 23880000 3630200 3633200 2335700 56364 4011 50660 474449;474450;474451;474452;474453;474454;474455;474456;474457 376587;376588 376587 5506 2 VINDKHDDVMAK Unmodified 1383.6816 0.68164933 4011 Q99460 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS 6.8 3.92 2 3 1 1 1 1 1 17.265 15.81 3 0.012929 15092 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 41.109 33.739 51097000 5007900 0 14404000 4572700 5227500 0 0 0 0 0 0 21885000 0 0 0 56365 4011 50660 474458;474459;474460;474461;474462 376589;376590;376591 376591 1 VINDLFSDVLEEGELDMEK Unmodified 2194.0351 0.035131042 4577 Q9NQW6 ANLN Actin-binding protein anillin yes yes 0 0 0 By MS/MS 2 0 2 2 99.367 91.237 2;3 5.3167E-09 117620 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 123.76 110.34 19848000 19848000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56366 4577 50661 474463;474464 376592;376593 376592 1 VINEEYK Unmodified 893.44945 0.44944778 2615;2169 Q09028;Q16576 RBBP4;RBBP7 Histone-binding protein RBBP4;Histone-binding protein RBBP7 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 17.831 18.019 2 0.023406 17570 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 86.866 57.059 1515100000 0 0 0 71629000 72374000 77285000 71314000 71811000 63864000 97899000 181650000 215930000 115310000 129500000 346510000 56367 2169;2615 50662 474465;474466;474467;474468;474469;474470;474471;474472;474473;474474;474475;474476 376594;376595;376596;376597;376598 376598 4 VINEPTAAALAYGLDK Unmodified 1644.8723 0.87228688 1399 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.68 1.57 1 24 1 2 2 2 2 2 2 2 2 2 2 2 2 80.321 80.188 2;3 3.552E-24 93036 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 146.5 116.97 723040000 0 101220000 0 16395000 24419000 33699000 33668000 36991000 30143000 62882000 71030000 79879000 36201000 56339000 140170000 56368 1399 50663 474477;474478;474479;474480;474481;474482;474483;474484;474485;474486;474487;474488;474489;474490;474491;474492;474493;474494;474495;474496;474497;474498;474499;474500;474501 376599;376600;376601;376602;376603;376604;376605;376606;376607;376608;376609;376610;376611 376610 12 VINIDFRDPEESK Unmodified 1560.7784 0.77838649 1533 P48147 PREP Prolyl endopeptidase yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 65.819 65.925 3 0.00039209 74737 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.078 70.245 53078000 0 0 0 6060500 0 0 0 0 0 0 8652900 0 1956700 6657800 29750000 56369 1533 50664 474502;474503;474504;474505;474506 376612;376613;376614 376612 3 VINLNDNTFTEK Unmodified 1406.7042 0.70415892 1495 P46060 RANGAP1 Ran GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.888 61.987 2 8.1928E-135 69977 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 218.47 178.11 874880000 0 0 0 54240000 50345000 74314000 64055000 58106000 53485000 93798000 94875000 85349000 78397000 56238000 111680000 56370 1495 50665 474507;474508;474509;474510;474511;474512;474513;474514;474515;474516;474517;474518 376615;376616;376617;376618;376619;376620;376621;376622;376623;376624;376625;376626;376627;376628 376623 14 VINQILTEMDGMSTK Oxidation (M) 1694.8219 0.82190756 1755 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 76.582 76.746 2 3.8798E-10 87992 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.401 86.447 35524000 0 0 0 0 0 2224500 0 0 0 0 5775700 7627900 0 3539900 16356000 56371 1755 50666 474519;474520;474521;474522;474523 376629;376630;376631;376632;376633 376629 2872;2873 5 VINQILTEMDGMSTK Unmodified 1678.827 0.82699294 1755 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 0 0 By MS/MS 10 0 1 1 82.546 82.748 2 0.00016508 95453 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.54 57.965 15751000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15751000 56372 1755 50666 474524 376634 376634 1 VINQILTEMDGMSTK 2 Oxidation (M) 1710.8168 0.81682219 1755 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 2 0 By MS/MS By MS/MS By MS/MS 10 0 4 1 1 2 53.515 54.091 2 0.00032324 61411 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 60.08 28.649 23668000 0 0 0 0 0 0 0 0 0 0 7308700 7629900 0 0 8729400 56373 1755 50666 474525;474526;474527;474528 376635;376636;376637 376636 2872;2873 2 VINQYQVVK Unmodified 1089.6182 0.61824444 2439 Q14694 USP10 Ubiquitin carboxyl-terminal hydrolase 10 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 52.348 52.73 2 0.039166 59037 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 44.692 3.0397 29582000 0 0 0 0 0 3841900 0 0 1511500 0 5179300 5067400 3979600 0 10002000 56374 2439 50667 474529;474530;474531;474532;474533;474534 376638 376638 1 VINQYQVVKPTAER Unmodified 1643.8995 0.89950468 2439 Q14694 USP10 Ubiquitin carboxyl-terminal hydrolase 10 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 42.753 42.89 3 0.0010942 47939 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 56.599 45.329 43857000 0 0 0 0 5275300 0 6030100 6746600 0 7121800 9721100 0 5464000 3498000 0 56375 2439 50668 474535;474536;474537;474538;474539;474540;474541 376639;376640;376641;376642;376643 376640 5 VINSVDIK Unmodified 886.51238 0.51238239 453 O75083 WDR1 WD repeat-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 37.353 35.948 2 0.012091 46316 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.19 24.877 2988300000 95370000 2699400000 35498000 1644500 0 1699300 2128500 2236800 0 3330500 27341000 0 5050100 29012000 85528000 56376 453 50669 474542;474543;474544;474545;474546;474547;474548;474549;474550;474551;474552;474553;474554 376644;376645;376646;376647;376648 376644 4 VINTPEVLR Unmodified 1039.6026 0.60259438 4357 Q9H223 EHD4 EH domain-containing protein 4 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 54.146 54.319 2 0.0080109 62949 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 70.856 4.9762 76259000 0 0 0 9562000 0 7629300 8660400 6376700 4451500 8747200 0 11333000 7924300 0 11574000 56377 4357 50670 474555;474556;474557;474558;474559;474560;474561;474562;474563 376649;376650;376651;376652;376653;376654 376654 6 VINVGQR Unmodified 784.45554 0.45553621 433 O60825 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 19.666 19.888 2 0.025542 19885 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 80.555 49.886 389090000 0 0 0 35301000 33622000 0 47354000 30811000 28630000 40828000 40475000 40823000 34628000 23739000 32878000 56378 433 50671 474564;474565;474566;474567;474568;474569;474570;474571;474572;474573;474574 376655;376656;376657;376658;376659;376660;376661;376662;376663 376661 9 VIPAADLSQQISTAGTEASGTGNMK Oxidation (M) 2462.1959 0.19588221 939 P11216 PYGB Glycogen phosphorylase, brain form yes yes 0 1 0 By MS/MS 2 0 2 2 77.387 72.611 2;3 1.0238E-48 90690 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.21 106.04 150090000 0 150090000 0 0 0 0 0 0 0 0 0 0 0 0 0 56379 939 50672 474575;474576 376664;376665 376665 1223 1 VIPAADLSQQISTAGTEASGTGNMK Unmodified 2446.201 0.20096759 939 P11216 PYGB Glycogen phosphorylase, brain form yes yes 0 0 0 By MS/MS 2 0 2 2 79.721 75.009 2;3 1.5021E-140 93421 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 232.78 212.68 303970000 0 303970000 0 0 0 0 0 0 0 0 0 0 0 0 0 56380 939 50672 474577;474578 376666;376667 376667 2 VIPATDLSEQISTAGTEASGTGNMK Unmodified 2477.1955 0.19554786 828 P06737 PYGL Glycogen phosphorylase, liver form yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 79.608 75.343 2;3 7.5972E-126 93740 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 216.26 197.81 165210000 0 165210000 0 0 0 0 0 0 0 0 0 0 0 0 0 56381 828 50673 474579;474580;474581 376668;376669;376670 376668 2 VIPATDLSEQISTAGTEASGTGNMK Oxidation (M) 2493.1905 0.19046249 828 P06737 PYGL Glycogen phosphorylase, liver form yes yes 0 1 0 By MS/MS 3 0 1 1 76.559 73.081 3 5.2274E-05 87789 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 54.235 50.502 10468000 0 10468000 0 0 0 0 0 0 0 0 0 0 0 0 0 56382 828 50673 474582 376671 376671 1002 1 VIPDFVCQGGDITK Unmodified 1547.7654 0.76537896 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.586 74.649 2 0.0004006 85574 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.288 70.869 128080000 0 0 0 4656500 7580100 8806800 6887200 9791000 6662500 9045700 12513000 13140000 10959000 16328000 21714000 56383 1601 50674 474583;474584;474585;474586;474587;474588;474589;474590;474591;474592;474593;474594 376672;376673;376674;376675;376676;376677;376678;376679;376680;376681;376682;376683;376684;376685 376675 14 VIPEDASESEEK Unmodified 1331.6093 0.60925548 4371 Q9H2P0 ADNP Activity-dependent neuroprotector homeobox protein yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 23.705 23.775 2 0.0059699 25082 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 62.303 36.917 59487000 0 0 0 5127400 6061600 6494400 5597300 6622900 4745500 7283600 0 0 9598800 7955400 0 56384 4371 50675 474595;474596;474597;474598;474599;474600;474601;474602;474603 376686;376687;376688 376687 3 VIPELNGK Unmodified 868.50182 0.5018177 782 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.67 3.89 12 3 12 3 7 5 1 1 1 1 1 1 1 1 1 1 1 1 44.225 41.451 2 0.0042815 45721 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 111.28 58.595 41819000000 2215500000 29950000000 1859400000 537290000 104390000 133210000 133690000 141300000 90707000 184920000 1399300000 946390000 168730000 790900000 3163800000 56385 782 50676 474604;474605;474606;474607;474608;474609;474610;474611;474612;474613;474614;474615;474616;474617;474618;474619;474620;474621;474622;474623;474624;474625;474626;474627;474628;474629;474630 376689;376690;376691;376692;376693;376694;376695;376696;376697;376698;376699;376700;376701;376702;376703;376704;376705;376706;376707;376708;376709;376710;376711;376712;376713;376714;376715;376716;376717;376718;376719;376720;376721;376722;376723;376724;376725;376726;376727;376728;376729 376689 41 VIPGAAEK Unmodified 783.44905 0.44905385 2474 Q15019 SEPT2 Septin-2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 15.797 16.314 2 0.017693 15770 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 65.252 12.569 70967000 0 0 0 0 0 0 0 0 0 0 41849000 0 0 0 29118000 56386 2474 50677 474631;474632 376730 376730 1 VIPHFTATADAFK Unmodified 1416.7402 0.74015049 2412 Q14554 PDIA5 Protein disulfide-isomerase A5 yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 76.83 70.426 2;3 0.01188 86903 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 40.066 29.74 85140000 79649000 0 5490900 0 0 0 0 0 0 0 0 0 0 0 0 56387 2412 50678 474633;474634;474635 376731;376732;376733 376733 2 VIPHQFDGVPDK Unmodified 1350.6932 0.6932003 401 O60447 EVI5 Ecotropic viral integration site 5 protein homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 6 4 3 3 1 1 1 1 1 1 52.05 49.237 3 0.026525 61805 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 26.942 18.532 66874000 12253000 17757000 19409000 0 0 0 4905900 0 0 0 0 6565100 0 5983900 0 56388 401 50679 474636;474637;474638;474639;474640;474641 376734;376735 376735 2 VIPLDRDNK Unmodified 1068.5928 0.59275797 2608 Q16531 DDB1 DNA damage-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 29.535 25.129 2 0.0064847 33169 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.22 115.07 432000000 224400000 79690000 127900000 0 0 0 0 0 0 0 0 0 0 0 0 56389 2608 50680 474642;474643;474644 376736;376737;376738;376739 376736 3 VIPPAGQTEDAEPISEPEK Unmodified 2005.9844 0.9844161 5206 Q9Y4L1 HYOU1 Hypoxia up-regulated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.8 3.66 1 3 11 2 2 1 1 1 1 1 1 1 1 1 2 58.723 58.42 2 5.1604E-46 67262 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.69 97.457 122220000 8223900 26918000 0 0 0 6596900 3905400 4449600 3782900 7108200 7802300 10622000 6368900 6761200 29684000 56390 5206 50681 474645;474646;474647;474648;474649;474650;474651;474652;474653;474654;474655;474656;474657;474658;474659 376740;376741;376742;376743;376744;376745;376746;376747;376748;376749;376750;376751;376752;376753 376743 13 VIPSQEHLNGPLPVPFTNGEIQK Unmodified 2513.3278 0.32782309 209 O14745 SLC9A3R1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 81.946 82.096 3 0.00059197 94656 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.179 27.985 44603000 0 0 0 0 0 0 0 0 0 4000000 8332900 6751300 0 5408800 20110000 56391 209 50682 474660;474661;474662;474663;474664 376754;376755;376756;376757 376754 4 VIPTLALLK Unmodified 966.64775 0.64775366 185 O14530 TXNDC9 Thioredoxin domain-containing protein 9 yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 90.416 84.746 2 0.035466 108521 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.48 50.52 72042000 66112000 5929200 0 0 0 0 0 0 0 0 0 0 0 0 0 56392 185 50683 474665;474666 376758;376759 376759 2 VIPTVTPDKPK Unmodified 1193.702 0.70197407 2818 Q5VUA4 ZNF318 Zinc finger protein 318 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.746 35.928 3 0.037878 38269 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.159 25.112 61797000 0 0 0 4119700 4590800 4291800 6678900 3951700 4233900 4352500 5031800 7730200 4370200 4376000 8070000 56393 2818 50684 474667;474668;474669;474670;474671;474672;474673;474674;474675;474676;474677;474678 376760;376761;376762 376761 3 VIQAGMFDQK Unmodified 1135.5696 0.56957969 1656;1655 P51532;P51531 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 52.197 51.344 2 0.00010821 65680 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 144.09 127.31 565440000 0 229730000 2181500 17272000 16930000 27240000 17903000 23896000 19642000 39535000 29484000 40719000 26536000 26736000 47636000 56394 1656;1655 50685 474679;474680;474681;474682;474683;474684;474685;474686;474687;474688;474689;474690;474691;474692;474693;474694 376763;376764;376765;376766;376767;376768;376769;376770;376771;376772;376773;376774;376775;376776;376777;376778;376779 376767 16 VIQAGMFDQK Oxidation (M) 1151.5645 0.56449431 1656;1655 P51532;P51531 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 no no 0 1 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.8 3.37 1 2 7 1 2 1 1 1 1 1 1 1 38.709 37.386 2 0.0010788 41587 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 89.698 68.17 140570000 188980 80667000 0 0 9306500 13037000 0 0 10992000 0 0 13818000 0 0 12563000 56395 1656;1655 50685 474695;474696;474697;474698;474699;474700;474701;474702;474703;474704 376780;376781;376782;376783;376784;376785;376786 376783 2666 7 VIQALAMK Unmodified 872.51536 0.51535927 1464 P42704 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 48.076 48.265 2 0.020013 54203 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 63.148 24.126 12292000 0 0 0 2321900 0 0 0 0 0 0 3954700 0 0 0 6015600 56396 1464 50686 474705;474706;474707 376787;376788 376788 2 VIQATGGGAYK Unmodified 1063.5662 0.56620887 4666 Q9NVE7 PANK4 Pantothenate kinase 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.55 1 1 4 2 1 1 1 1 23.061 21.62 2 1.9684E-05 22877 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 128.38 49.768 760030000 0 92528000 0 130350000 240560000 282710000 13880000 0 0 0 0 0 0 0 0 56397 4666 50687 474708;474709;474710;474711;474712;474713 376789;376790;376791;376792;376793;376794;376795 376789 7 VIQCFAETGQVQK Unmodified 1506.7501 0.75006325 2040 Q00610 CLTC Clathrin heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 4 2 12 1 4 1 1 1 1 1 1 1 1 1 1 1 1 1 48.653 46.912 2;3 3.7134E-33 60654 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 170.47 155.53 1344700000 19842000 1021700000 6687300 10673000 11501000 21158000 9808900 7357500 16704000 28914000 25305000 49707000 25196000 26138000 63977000 56398 2040 50688 474714;474715;474716;474717;474718;474719;474720;474721;474722;474723;474724;474725;474726;474727;474728;474729;474730;474731 376796;376797;376798;376799;376800;376801;376802;376803;376804;376805;376806;376807;376808;376809;376810;376811;376812;376813;376814;376815 376801 20 VIQDVLEDK Unmodified 1057.5655 0.56554017 3166 Q86VI3 IQGAP3 Ras GTPase-activating-like protein IQGAP3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 54.443 48.638 2 0.028492 62746 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.897 21.471 25570000 0 25570000 0 0 0 0 0 0 0 0 0 0 0 0 0 56399 3166 50689 474732;474733;474734;474735;474736 376816;376817;376818;376819;376820 376817 5 VIQEGLEGLVLK Unmodified 1296.7653 0.76530261 1613 P49916 LIG3 DNA ligase 3 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 81.387 81.534 2 0.0059718 94432 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 52.549 28.756 5705700 0 0 0 0 0 0 0 0 0 2666200 3039500 0 0 0 0 56400 1613 50690 474737;474738 376821 376821 1 VIQEIVDK Unmodified 942.5386 0.53859714 1645 P51114;P51116 FXR1;FXR2 Fragile X mental retardation syndrome-related protein 1;Fragile X mental retardation syndrome-related protein 2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.056 37.236 2 0.006803 41101 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 96.19 49.355 99219000 0 0 0 5545000 5964100 6568000 7797600 6922000 5765800 10210000 9200000 11397000 11559000 9147600 9143000 56401 1645 50691 474739;474740;474741;474742;474743;474744;474745;474746;474747;474748;474749;474750 376822;376823;376824;376825;376826;376827;376828 376822 7 VIQENEHALQK Unmodified 1307.6834 0.68336389 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.4 6 2 23 2 4 2 2 2 2 2 1 2 2 2 2 2 2 2 21.488 20.586 2;3 4.4277E-08 27409 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 150.1 112.63 2615300000 50014000 1057900000 142560000 59445000 62118000 135050000 77607000 63785000 58941000 118180000 160280000 205100000 108860000 137570000 177880000 56402 4634 50692 474751;474752;474753;474754;474755;474756;474757;474758;474759;474760;474761;474762;474763;474764;474765;474766;474767;474768;474769;474770;474771;474772;474773;474774;474775;474776;474777;474778;474779;474780;474781 376829;376830;376831;376832;376833;376834;376835;376836;376837;376838;376839;376840;376841;376842;376843;376844;376845;376846;376847;376848;376849;376850;376851;376852;376853;376854;376855;376856 376837 22 VIQGLYSGVTTVELDTLAAETAATLTTK Unmodified 2865.5223 0.52228496 1171 P23921 RRM1 Ribonucleoside-diphosphate reductase large subunit yes yes 0 0 0 By MS/MS By MS/MS By matching 2.33 0.471 4 2 2 3 1 101.31 96.805 2;3 0 120470 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 301.82 292.03 480960000 21608000 457880000 1468100 0 0 0 0 0 0 0 0 0 0 0 0 56403 1171 50693 474782;474783;474784;474785;474786;474787 376857;376858;376859;376860;376861;376862 376860 6 VIQMAGLAGFGDEGK Oxidation (M) 1507.7341 0.73407884 5364 yes yes 0 1 0 By MS/MS 2.33 0.471 2 1 3 53.973 48.472 2 0.0012451 62827 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.657 36.723 + 115310000 0 115310000 0 0 0 0 0 0 0 0 0 0 0 0 0 56404 5364 50694 474788;474789;474790 376863;376864 376864 6747 2 VIQMVPEFAASPK Oxidation (M) 1431.7432 0.74318696 3517 Q8TEQ0 SNX29 Sorting nexin-29 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 64.224 64.261 2 0.00046692 73483 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 72.2 56.003 67445000 0 0 0 3863600 5219600 6133400 8567600 8355000 4538700 6873100 7470300 10041000 0 6382600 0 56405 3517 50695 474791;474792;474793;474794;474795;474796;474797;474798;474799;474800 376865;376866;376867;376868;376869;376870;376871;376872;376873;376874 376865 5019 10 VIQMVPEFAASPK Unmodified 1415.7483 0.74827234 3517 Q8TEQ0 SNX29 Sorting nexin-29 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 77.955 78.015 2 4.7101E-09 89270 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 112.13 79.809 100100000 0 0 0 5034100 4949400 8175400 6137200 9961400 5965700 8020700 6620000 10989000 8126000 8349100 17769000 56406 3517 50695 474801;474802;474803;474804;474805;474806;474807;474808;474809;474810;474811;474812;474813 376875;376876;376877;376878;376879;376880;376881;376882;376883;376884 376881 10 VIQNIIYYK Unmodified 1152.6543 0.6542956 3711 Q93100 PHKB Phosphorylase b kinase regulatory subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 65.744 65.731 2 0.017183 75665 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 55.902 28.02 15588000 0 0 0 1624200 0 3133500 1790600 0 1662800 0 0 0 2426100 4950600 0 56407 3711 50696 474814;474815;474816;474817;474818;474819 376885;376886 376886 2 VIQPMGMSPR Unmodified 1114.5627 0.56272017 4556 Q9NPQ8 RIC8A Synembryn-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 48.801 49.38 2 0.0122 55563 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 72.879 25.031 38125000 0 0 0 0 0 0 0 0 0 0 17582000 0 0 0 20543000 56408 4556 50697 474820;474821;474822 376887;376888;376889 376887 1 VIQPMGMSPR 2 Oxidation (M) 1146.5525 0.55254942 4556 Q9NPQ8 RIC8A Synembryn-A yes yes 0 2 0 By MS/MS By matching By MS/MS By matching By MS/MS By matching 10 0 6 1 1 1 1 1 1 20.783 20.888 2 0.0046098 21401 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 50.805 37.427 23711000 0 0 0 0 3012400 3213600 6595500 0 2222500 4589500 0 0 0 0 4077200 56409 4556 50697 474823;474824;474825;474826;474827;474828 376890;376891 376890 5967;5968 2 VIQPTSGMIGSLSMHPELANAHNVIVTER 2 Oxidation (M) 3132.5696 0.56960305 2075 Q02413 DSG1 Desmoglein-1 yes yes 0 2 0 By MS/MS 10 0 1 1 74.455 74.641 4 1.3149E-15 86047 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 54.683 48.456 25380000 0 0 0 0 0 0 0 25380000 0 0 0 0 0 0 0 56410 2075 50698 474829 376892 376892 3376;3377 1 VIQQESYTYK Unmodified 1257.6241 0.62411768 1809 P60228 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS 7.7 3.52 2 1 7 2 1 1 1 1 1 1 1 1 33.26 32.072 2 1.0388E-10 40419 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 179.68 133.96 683990000 0 498530000 3129000 0 0 21788000 16963000 0 16303000 0 38918000 41419000 0 0 46937000 56411 1809 50699 474830;474831;474832;474833;474834;474835;474836;474837;474838;474839 376893;376894;376895;376896;376897;376898;376899 376894 7 VIQQSLEQEEAEHK Unmodified 1666.8162 0.81622856 455 O75116 ROCK2 Rho-associated protein kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.89 3.41 3 2 13 4 1 1 1 2 1 1 1 1 1 1 1 2 35.058 33.954 2;3 3.2691E-59 43851 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 199.08 171.59 779750000 0 544890000 6562200 9682500 11737000 18032000 19738000 0 11329000 18985000 28829000 25234000 30714000 19089000 34929000 56412 455 50700 474840;474841;474842;474843;474844;474845;474846;474847;474848;474849;474850;474851;474852;474853;474854;474855;474856;474857 376900;376901;376902;376903;376904;376905;376906;376907;376908;376909;376910;376911;376912;376913;376914;376915;376916;376917;376918;376919 376906 18 VIQQSVR Unmodified 828.48175 0.48175096 3693 Q92974 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 0 0 0 By MS/MS 10 0 1 1 12.355 12.343 2 0.046182 11466 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 111.28 29.016 30368000 0 0 0 0 0 0 30368000 0 0 0 0 0 0 0 0 56413 3693 50701 474858 376920 376920 0 VIQSADSK Unmodified 846.4447 0.44469675 149 O00410 IPO5 Importin-5 yes yes 0 0 0 By MS/MS 10 0 1 1 5.6392 5.6213 2 0.018283 3468 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 64.567 42.075 2256100 0 0 0 0 0 2256100 0 0 0 0 0 0 0 0 0 56414 149 50702 474859 376921 376921 1 VIQSLEDTAK Unmodified 1102.587 0.58700389 2843 Q66K14 TBC1D9B TBC1 domain family member 9B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 6.25 3.77 1 1 2 2 1 1 36.687 34.378 2 0.0016854 43965 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.71 54.184 143600000 0 127540000 0 0 0 0 6354000 0 0 0 0 0 0 9702800 0 56415 2843 50703 474860;474861;474862;474863 376922;376923;376924 376922 3 VIQSQDGFPAGQELLGYK Unmodified 1948.9894 0.9894419 2160 Q08554 DSC1 Desmocollin-1 yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 4 1 2 1 80.552 80.708 2;3 4.0654E-06 93176 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 99.011 93.732 47304000 0 0 0 0 0 0 4278900 40021000 0 0 0 0 3004000 0 0 56416 2160 50704 474864;474865;474866;474867 376925;376926;376927 376926 3 VIQSVANYAK Unmodified 1091.5975 0.597509 234 O14976 GAK Cyclin-G-associated kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 40.384 39.821 2 0.0014466 44609 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 91.069 62.86 484260000 0 42313000 0 22229000 24437000 37341000 34979000 35357000 35277000 41899000 39047000 47073000 38297000 32315000 53701000 56417 234 50705 474868;474869;474870;474871;474872;474873;474874;474875;474876;474877;474878;474879;474880;474881 376928;376929;376930;376931;376932;376933;376934;376935;376936;376937;376938;376939;376940;376941;376942 376928 15 VIQSVTSYTK Unmodified 1124.6077 0.60773933 452 O75061 DNAJC6 Putative tyrosine-protein phosphatase auxilin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.608 37.788 2 0.0016946 41789 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 94.692 73.228 83361000 0 0 0 3108800 6074100 4861400 5721300 6744700 4202700 9508200 8167000 9622300 6484100 6921200 11945000 56418 452 50706 474882;474883;474884;474885;474886;474887;474888;474889;474890;474891;474892;474893 376943;376944;376945;376946;376947;376948;376949;376950;376951;376952;376953;376954 376944 12 VIQTHPHANK Unmodified 1143.6149 0.6148904 3138 Q86TU7 SETD3 Histone-lysine N-methyltransferase setd3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 2 2 2 6.8888 3.8777 2;3 0.0014871 5838 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 87.258 63.904 540690000 459270000 39218000 42203000 0 0 0 0 0 0 0 0 0 0 0 0 56419 3138 50707 474894;474895;474896;474897;474898;474899 376955;376956;376957;376958 376958 3 VIQVAAGSSNLK Unmodified 1185.6717 0.67173657 796 P05091 ALDH2 Aldehyde dehydrogenase, mitochondrial yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 41.725 41.628 2 0.0034015 47041 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 73.985 21.269 21008000 0 0 0 11848000 0 0 2184600 6974800 0 0 0 0 0 0 0 56420 796 50708 474900;474901;474902 376959;376960 376960 2 VIQWCTHHK Unmodified 1207.592 0.59204647 1946 P63208 SKP1 S-phase kinase-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 2 2 1 2 1 2 2 2 2 22.023 22.298 2;3 0.0035145 21977 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 105.57 80.645 448360000 0 0 0 15309000 0 36324000 9199200 7772800 17746000 1664000 43748000 98104000 62802000 0 155690000 56421 1946 50709 474903;474904;474905;474906;474907;474908;474909;474910;474911;474912;474913;474914;474915;474916;474917;474918;474919 376961;376962;376963;376964;376965;376966 376963 6 VIQWLLEEK Unmodified 1156.6492 0.64921022 2986 Q6VMQ6 ATF7IP Activating transcription factor 7-interacting protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 87.435 79.305 2 0.0050542 103188 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 111.95 77.694 25942000 25942000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56422 2986 50710 474920 376967 376967 1 VIQYLAYVASSHK Unmodified 1477.7929 0.79291434 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.67 1.6 1 23 1 2 2 2 2 1 2 2 2 2 2 2 2 73.196 72.912 2;3 2.3533E-62 83691 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 187.97 153.72 2243700000 18182000 0 0 97742000 103340000 319730000 130720000 23454000 198860000 203430000 147950000 292930000 155230000 147200000 404960000 56423 1356 50711 474921;474922;474923;474924;474925;474926;474927;474928;474929;474930;474931;474932;474933;474934;474935;474936;474937;474938;474939;474940;474941;474942;474943;474944 376968;376969;376970;376971;376972;376973;376974;376975;376976;376977;376978;376979;376980;376981;376982;376983;376984;376985;376986;376987;376988;376989;376990;376991 376986 21 VIRDFNTNK Unmodified 1105.588 0.58800695 2566 Q15717 ELAVL1 ELAV-like protein 1 no no 0 0 1 By MS/MS 2 0 1 1 24.659 19.581 2 0.0019261 27815 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 150.62 81.421 120280000 120280000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56424 2566 50712 474945 376992 376992 1 VIRGWDEALLTMSK Oxidation (M) 1633.8498 0.84977729 2043 Q00688 FKBP3 Peptidyl-prolyl cis-trans isomerase FKBP3 yes yes 0 1 1 By MS/MS 2 0 1 1 80.877 72.747 3 0.0084003 95346 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.599 44.541 8912200 8912200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56425 2043 50713 474946 376993 376993 3305 0 VIRPLDQPSSFDATPYIK Unmodified 2046.0786 0.078591257 3170 Q86VP6 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.16 3.73 5 2 12 4 1 2 1 1 1 1 1 1 1 1 1 1 1 1 78.68 76.79 2;3 7.101E-16 88575 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 97.502 93.524 1374400000 685810000 21869000 58295000 8518500 12830000 87850000 22352000 36545000 23720000 66857000 38147000 46508000 26534000 56652000 181960000 56426 3170 50714 474947;474948;474949;474950;474951;474952;474953;474954;474955;474956;474957;474958;474959;474960;474961;474962;474963;474964;474965 376994;376995;376996;376997;376998;376999;377000;377001;377002;377003;377004;377005;377006 376996 8 VIRSDGAPAEGK Unmodified 1198.6306 0.63060004 2343 Q13769 THOC5 THO complex subunit 5 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 10.562 9.746 3 0.0033985 11741 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 66.498 55.592 148030000 12539000 62200000 27133000 0 2263400 3224400 5166100 2890300 3094600 0 8222400 6200900 5070300 3822800 6201600 56427 2343 50715 474966;474967;474968;474969;474970;474971;474972;474973;474974;474975;474976;474977;474978;474979 377007;377008;377009;377010;377011;377012;377013;377014;377015;377016;377017 377010 10 VISALADMQSK Oxidation (M) 1177.6013 0.60127375 378 O43896 KIF1C Kinesin-like protein KIF1C yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 8 1 1 1 1 1 2 1 35.014 35.207 2 0.0029007 39197 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 61.56 45.357 33025000 0 0 0 3773400 4984100 4559100 0 0 0 0 5040700 12109000 0 2558800 0 56428 378 50716 474980;474981;474982;474983;474984;474985;474986;474987 377018;377019;377020;377021 377021 486 4 VISDSESDIGGSDVEFKPDTK Unmodified 2224.0383 0.038302164 1694 P52701 MSH6 DNA mismatch repair protein Msh6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.746 58.859 3 1.1284E-07 66847 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 63.165 59.503 239210000 0 0 0 14312000 15006000 18934000 17097000 16542000 17359000 18236000 21854000 20603000 25180000 16221000 37864000 56429 1694 50717 474988;474989;474990;474991;474992;474993;474994;474995;474996;474997;474998;474999 377022;377023;377024;377025;377026;377027;377028;377029;377030;377031;377032;377033;377034 377032 13 VISELNGK Unmodified 858.48108 0.48108226 807 P05387 RPLP2 60S acidic ribosomal protein P2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.81 2.8 3 1 22 1 2 1 2 1 1 2 2 2 2 2 2 2 2 2 24.209 23.755 2 0.0028011 29433 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 151.17 56.766 2559400000 47666000 1178300000 21699000 59979000 49356000 35412000 63980000 59831000 46999000 94637000 167380000 193050000 160100000 140430000 240560000 56430 807 50718 475000;475001;475002;475003;475004;475005;475006;475007;475008;475009;475010;475011;475012;475013;475014;475015;475016;475017;475018;475019;475020;475021;475022;475023;475024;475025 377035;377036;377037;377038;377039;377040;377041;377042;377043;377044;377045;377046;377047;377048;377049;377050;377051 377047 14 VISESPPDQWEAR Unmodified 1512.7209 0.72087161 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 54.81 54.942 2 4.6886E-07 62062 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 96.113 72.685 197480000 0 0 0 11298000 12099000 18845000 19159000 15422000 11148000 18301000 20052000 19756000 13744000 16741000 20911000 56431 3641 50719 475026;475027;475028;475029;475030;475031;475032;475033;475034;475035;475036;475037 377052;377053;377054;377055;377056;377057;377058;377059;377060;377061;377062 377057 11 VISFIENTSTPVDR Unmodified 1576.8097 0.80968662 4656 Q9NUY8 TBC1D23 TBC1 domain family member 23 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 73.445 73.454 2 3.5452E-22 84612 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 173.71 145.31 50306000 0 0 0 8040900 0 0 7878100 0 0 12770000 11759000 0 9857700 0 0 56432 4656 50720 475038;475039;475040;475041;475042;475043;475044;475045;475046;475047 377063;377064;377065;377066;377067;377068;377069;377070;377071;377072;377073;377074 377065 12 VISGTTLGYLSPK Unmodified 1334.7446 0.74456717 4647 Q9NUL3 STAU2 Double-stranded RNA-binding protein Staufen homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 71.26 71.406 2 0.00042425 81462 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.102 59.155 28258000 0 0 0 0 1917600 0 0 0 1931200 3989200 4033500 4206600 3688800 3770800 4720800 56433 4647 50721 475048;475049;475050;475051;475052;475053;475054;475055 377075;377076;377077;377078;377079;377080;377081;377082 377076 8 VISGVLQLGNIVFK Unmodified 1485.8919 0.89190011 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 94.772 94.905 2 0.027893 110070 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.336 27.645 4369800 0 0 0 0 0 0 0 0 0 1529200 0 0 0 0 2840600 56434 1356 50722 475056;475057 377083 377083 1 VISHPTLPISITAHEDR Unmodified 1885.0058 0.005760665 371 O43815 STRN Striatin yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 68.227 68.405 4 0.035725 77739 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 24.367 20.146 30384000 0 0 0 0 0 4585300 787650 1932100 3098700 4324600 0 0 0 0 15656000 56435 371 50723 475058;475059;475060;475061;475062;475063 377084 377084 1 VISLQECLDEANAALDSASR Unmodified 2161.0321 0.03211135 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS 10 0 1 1 89.47 89.582 2 9.0624E-05 103968 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 68.034 62.857 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56436 2556 50724 475064 377085 377085 1 VISNEFNSRNLVNDDDAIVAASK Unmodified 2490.235 0.23504491 2112 Q05086 UBE3A Ubiquitin-protein ligase E3A yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 77.901 74.846 3 3.4626E-05 91125 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 60.464 52.842 25994000 0 3820300 22173000 0 0 0 0 0 0 0 0 0 0 0 0 56437 2112 50725 475065;475066;475067 377086;377087;377088;377089 377089 4 VISTMSVGIDHLALDEIK Oxidation (M) 1956.0238 0.023778495 4852 Q9UBQ7 GRHPR Glyoxylate reductase/hydroxypyruvate reductase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 85.28 80.631 3 3.0015E-14 101487 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.49 98.909 189290000 22195000 98043000 69048000 0 0 0 0 0 0 0 0 0 0 0 0 56438 4852 50726 475068;475069;475070;475071 377090;377091;377092;377093;377094 377090 6214 5 VISTMSVGIDHLALDEIK Unmodified 1940.0289 0.028863873 4852 Q9UBQ7 GRHPR Glyoxylate reductase/hydroxypyruvate reductase yes yes 0 0 0 By MS/MS 2 0 1 1 91.805 86.894 3 4.6432E-05 107917 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.238 70.488 23612000 0 23612000 0 0 0 0 0 0 0 0 0 0 0 0 0 56439 4852 50726 475072 377095;377096 377095 2 VISTTDAER Unmodified 990.49819 0.49818889 653 O95394 PGM3 Phosphoacetylglucosamine mutase yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 15.544 15.735 2 0.0029321 14522 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 125.31 56.893 115260000 0 0 0 3535800 2252800 6438300 0 0 1947800 6420500 15770000 18833000 6448700 14449000 39162000 56440 653 50727 475073;475074;475075;475076;475077;475078;475079;475080;475081;475082 377097;377098;377099;377100 377098 4 VISVDELEYRQ Unmodified 1349.6827 0.68269519 4596 Q9NRA8 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 67.966 68.114 2 0.0023362 77230 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 108.98 65.731 104150000 0 0 0 0 6358700 7167300 7202400 8577700 7102400 10722000 9422100 11604000 9219900 9209200 17563000 56441 4596 50728 475083;475084;475085;475086;475087;475088;475089;475090;475091;475092;475093 377101;377102;377103;377104;377105;377106;377107;377108;377109;377110;377111 377108 11 VISVSTSER Unmodified 976.51892 0.51892433 2927 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 26.827 27.167 2 0.008617 28007 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 69.105 29.343 28895000 0 0 0 0 0 4932600 0 0 0 0 0 16042000 0 7920100 0 56442 2927 50729 475094;475095;475096 377112 377112 1 VISYEEGK Unmodified 923.46001 0.46001246 2524 Q15382 RHEB GTP-binding protein Rheb yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 21.661 21.532 2 0.0076113 21435 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.046 50.21 409130000 0 24357000 0 23498000 12358000 29008000 28232000 25881000 17392000 38551000 38659000 52798000 33147000 38490000 46755000 56443 2524 50730 475097;475098;475099;475100;475101;475102;475103;475104;475105;475106;475107;475108;475109 377113;377114;377115;377116 377116 4 VISYGDDYADLPEYFK Unmodified 1893.8673 0.86726108 4082 Q9BPY3 FAM118B Protein FAM118B yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 89.875 84.462 2 0.0018135 107075 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.92 72.965 114320000 5318100 109000000 0 0 0 0 0 0 0 0 0 0 0 0 0 56444 4082 50731 475110;475111;475112 377117;377118 377118 2 VITALVER Unmodified 899.54402 0.54401687 1695 P52732 KIF11 Kinesin-like protein KIF11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 49.902 50.008 2 0.026823 56530 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 57.722 18.75 77122000 0 0 0 5545900 5632700 0 0 8897200 0 11529000 8945700 0 10052000 11541000 14979000 56445 1695 50732 475113;475114;475115;475116;475117;475118;475119;475120 377119;377120 377120 2 VITCEIAWHNK Unmodified 1369.6813 0.6812554 2235 Q13112 CHAF1B Chromatin assembly factor 1 subunit B yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 58.495 52.436 3 1.2934E-05 71548 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.456 83.647 56269000 51362000 0 4906500 0 0 0 0 0 0 0 0 0 0 0 0 56446 2235 50733 475121;475122 377121;377122;377123;377124 377122 4 VITDIAGVIPAEK Unmodified 1324.7602 0.76021723 1347 P35249 RFC4 Replication factor C subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 78.676 77.548 2 2.3105E-13 89874 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 170.89 145.97 4259100000 23453000 1869500000 17346000 119070000 159320000 180780000 182370000 163220000 145610000 239470000 244470000 267210000 184280000 178050000 284940000 56447 1347 50734 475123;475124;475125;475126;475127;475128;475129;475130;475131;475132;475133;475134;475135;475136;475137;475138 377125;377126;377127;377128;377129;377130;377131;377132;377133;377134;377135;377136;377137;377138;377139;377140 377125 16 VITDPSLSK Unmodified 958.53351 0.53351176 4584 Q9NR09 BIRC6 Baculoviral IAP repeat-containing protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 34.385 34.533 2 0.023307 37531 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 51.113 12.695 42475000 0 0 0 2558000 3255900 0 3637600 3570000 0 7084300 7482700 0 4363400 3216800 7306000 56448 4584 50735 475139;475140;475141;475142;475143;475144;475145;475146;475147 377141;377142 377142 2 VITDVYYVDGTEVERK Unmodified 1884.9469 0.94690838 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 62.966 63.236 3 0.00036282 71485 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.861 47.444 79160000 0 0 0 0 0 7843900 0 0 0 9827400 9370800 9773300 10497000 8398600 23450000 56449 2203 50736 475148;475149;475150;475151;475152;475153;475154 377143;377144;377145;377146;377147;377148 377144 6 VITEEEK Unmodified 846.43346 0.43346336 1203 P26373 RPL13 60S ribosomal protein L13 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 8.9758 9.1547 2 0.020538 6615 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 108.24 53.451 107340000 0 0 0 8392100 0 0 9558900 8411200 6199600 6500500 22663000 16016000 12437000 7705500 9453500 56450 1203 50737 475155;475156;475157;475158;475159;475160;475161;475162;475163;475164 377149;377150;377151;377152 377150 4 VITEYLNAQESAK Unmodified 1464.746 0.74602373 3039 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 4 2 12 2 2 2 1 1 1 1 1 1 1 1 1 1 1 1 57.494 55.811 2 3.0903E-75 64020 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 232.88 120.93 3061400000 25967000 2643200000 40189000 15175000 16555000 41590000 20549000 21594000 12905000 35403000 37621000 34514000 23880000 28116000 64120000 56451 3039 50738 475165;475166;475167;475168;475169;475170;475171;475172;475173;475174;475175;475176;475177;475178;475179;475180;475181;475182 377153;377154;377155;377156;377157;377158;377159;377160;377161;377162;377163;377164;377165;377166;377167;377168;377169;377170;377171;377172 377153 20 VITFIDLAGHEK Unmodified 1341.7293 0.72925145 124 O00178 GTPBP1 GTP-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 82.837 77.508 3 0.0060335 95067 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 42.789 33.277 45342000 35070000 0 10272000 0 0 0 0 0 0 0 0 0 0 0 0 56452 124 50739 475183;475184 377173;377174 377174 2 VITIMQNPR Oxidation (M) 1086.5856 0.5855641 1885 P62269 RPS18 40S ribosomal protein S18 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 1 2 2 2 2 2 2 2 2 2 2 34.442 34.652 2 1.0455E-05 38898 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 157.52 133.36 1339800000 0 0 0 91729000 45961000 101530000 81092000 75244000 67751000 122270000 161210000 206750000 128460000 113160000 144610000 56453 1885 50740 475185;475186;475187;475188;475189;475190;475191;475192;475193;475194;475195;475196;475197;475198;475199;475200;475201;475202;475203;475204;475205;475206;475207 377175;377176;377177;377178;377179;377180;377181;377182;377183;377184;377185;377186;377187;377188;377189;377190;377191;377192;377193;377194;377195;377196;377197 377196 3059 14 VITIMQNPR Unmodified 1070.5906 0.59064948 1885 P62269 RPS18 40S ribosomal protein S18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 50.784 50.935 2 8.2627E-06 56538 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 155.51 137.11 1049000000 0 0 0 56868000 74007000 73364000 48868000 44928000 57206000 84322000 107010000 147570000 88070000 113480000 153290000 56454 1885 50740 475208;475209;475210;475211;475212;475213;475214;475215;475216;475217;475218;475219 377198;377199;377200;377201;377202;377203;377204;377205;377206;377207;377208;377209;377210;377211;377212;377213;377214;377215;377216;377217;377218;377219;377220;377221 377208 24 VITLMDAPGHK Unmodified 1180.6274 0.62742892 5184 Q9Y450 HBS1L HBS1-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.67 3.94 5 7 2 1 2 1 1 1 1 1 1 1 52.373 50.063 2;3 0.0050704 54507 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.693 46.033 406030000 212710000 54341000 54609000 0 0 9559900 7817500 8632900 0 13423000 10465000 13344000 0 0 21130000 56455 5184 50741 475220;475221;475222;475223;475224;475225;475226;475227;475228;475229;475230;475231 377222;377223;377224;377225;377226;377227 377223 4 VITLMDAPGHK Oxidation (M) 1196.6223 0.62234354 5184 Q9Y450 HBS1L HBS1-like protein yes yes 0 1 0 By MS/MS By MS/MS 2 0 4 2 2 41.824 36.638 3 0.00035749 46854 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 88.056 77.748 288150000 187380000 0 100770000 0 0 0 0 0 0 0 0 0 0 0 0 56456 5184 50741 475232;475233;475234;475235 377228;377229;377230;377231;377232;377233;377234 377234 6553 7 VITMFVQR Oxidation (M) 1008.5426 0.54263666 974 P13010 XRCC5 X-ray repair cross-complementing protein 5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.192 47.357 2 0.0038327 53860 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 105.39 88.448 657010000 0 0 0 33820000 32277000 51936000 48705000 32486000 32773000 62028000 68092000 83996000 55945000 52072000 102880000 56457 974 50742 475236;475237;475238;475239;475240;475241;475242;475243;475244;475245;475246;475247 377235;377236;377237;377238;377239;377240;377241;377242;377243;377244;377245;377246;377247;377248 377248 1301 9 VITMFVQR Unmodified 992.54772 0.54772204 974 P13010 XRCC5 X-ray repair cross-complementing protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.534 63.627 2 0.0043036 72133 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 111.73 88.685 404900000 0 0 0 15678000 12199000 36728000 19960000 25756000 15570000 37087000 42173000 50174000 25800000 35598000 88173000 56458 974 50742 475248;475249;475250;475251;475252;475253;475254;475255;475256;475257;475258;475259 377249;377250;377251;377252;377253;377254;377255;377256;377257;377258;377259;377260;377261;377262 377260 14 VITNFNSAHDTDR Unmodified 1488.6957 0.69571949 2150 Q08188 TGM3 Protein-glutamine gamma-glutamyltransferase E;Protein-glutamine gamma-glutamyltransferase E 50 kDa catalytic chain;Protein-glutamine gamma-glutamyltransferase E 27 kDa non-catalytic chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 2 1 2 1 2 2 2 2 1 2 29.635 29.83 2;3 0.0013111 32237 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 60.401 57.213 284120000 0 0 0 62914000 14265000 15545000 14875000 45722000 10772000 22060000 14685000 35620000 20519000 11670000 15471000 56459 2150 50743 475260;475261;475262;475263;475264;475265;475266;475267;475268;475269;475270;475271;475272;475273;475274;475275;475276;475277;475278;475279;475280 377263;377264;377265;377266;377267;377268;377269;377270;377271;377272;377273;377274;377275 377272 11 VITNQYNNPAGLYSSENISNFNNALESK Unmodified 3100.4738 0.47377163 119 O00151 PDLIM1 PDZ and LIM domain protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 83.538 83.62 3 3.8337E-249 96556 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 211.72 200.41 137520000 0 0 0 0 2160500 0 0 0 0 12545000 26261000 22067000 0 7459300 67024000 56460 119 50744 475281;475282;475283;475284;475285;475286 377276;377277;377278;377279;377280;377281 377277 6 VITSQAGK Unmodified 802.45487 0.45486751 2450 Q14814 MEF2D Myocyte-specific enhancer factor 2D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 13 2 2 1 2 1 2 1 1 1 13.774 13.816 2 0.013714 4972 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 71.715 26.742 86074000 0 0 0 14460000 15787000 3815500 17750000 15772000 10944000 0 2885800 0 1744700 0 2914600 56461 2450 50745 475287;475288;475289;475290;475291;475292;475293;475294;475295;475296;475297;475298;475299 377282;377283;377284;377285 377283 3 VITTVLKFPDDQTQK Unmodified 1731.9407 0.94070079 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 1 By matching By MS/MS By MS/MS 10 0 3 1 1 1 61.813 61.802 3 0.040964 70528 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 18.096 0.35162 72204000 0 0 0 13040000 0 0 0 24838000 0 0 0 34326000 0 0 0 56462 2291 50746 475300;475301;475302 377286 377286 1 VIVDFAGSSK Unmodified 1021.5444 0.5444108 3069 Q7Z2E3 APTX Aprataxin yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 56.222 50.878 2 0.038703 62943 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 55.549 32.026 47782000 0 47782000 0 0 0 0 0 0 0 0 0 0 0 0 0 56463 3069 50747 475303;475304 377287 377287 1 VIVDFSSPNIAK Unmodified 1288.7027 0.70270235 1733 P54136 RARS Arginine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 4 2 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 73.956 72.711 2 3.8935E-06 87292 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 112.75 64.465 2181500000 95110000 1237700000 37753000 32392000 47358000 85349000 51383000 49274000 47287000 86355000 88598000 84070000 46097000 63272000 129480000 56464 1733 50748 475305;475306;475307;475308;475309;475310;475311;475312;475313;475314;475315;475316;475317;475318;475319;475320;475321;475322 377288;377289;377290;377291;377292;377293;377294;377295;377296;377297;377298;377299;377300;377301;377302;377303 377297 11 VIVDGSDMEEWPCIASK Unmodified 1934.8754 0.8753997 5055 Q9UPQ9 TNRC6B Trinucleotide repeat-containing gene 6B protein yes yes 0 0 0 By MS/MS 2 0 1 1 85.435 80.661 2 4.1459E-13 100338 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.99 119.87 13905000 0 13905000 0 0 0 0 0 0 0 0 0 0 0 0 0 56465 5055 50749 475323 377304 377304 1 VIVEHAR Unmodified 822.47119 0.47118627 2260;2149 Q08170;Q13247 SRSF4;SRSF6 Serine/arginine-rich splicing factor 4;Serine/arginine-rich splicing factor 6 no no 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 9.3083 9.4272 2 0.029815 6728 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 75.311 54.829 35844000 0 0 0 0 5082700 3083400 7765800 4458600 3491200 0 0 0 6161800 5610800 189920 56466 2149;2260 50750 475324;475325;475326;475327;475328;475329;475330;475331 377305 377305 1 VIVESASNIPK Unmodified 1155.6499 0.6499385 4773 Q9NZM1 MYOF Myoferlin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 46.126 46.295 2 0.038078 51988 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 47.187 11.742 96385000 0 0 0 6024500 7401500 6168400 8721100 16190000 6260100 0 9169400 11180000 8958800 6384100 9926900 56467 4773 50751 475332;475333;475334;475335;475336;475337;475338;475339;475340;475341;475342 377306 377306 1 VIVFDGVPSK Unmodified 1059.5964 0.59644637 1839 P61221 ABCE1 ATP-binding cassette sub-family E member 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 65.422 65.468 2 0.042395 74977 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 39.305 28.89 32987000 0 0 0 3072500 1530400 4639100 2907600 3313700 1512900 2370900 4264200 3814200 2409500 3152300 0 56468 1839 50752 475343;475344;475345;475346;475347;475348;475349;475350;475351;475352;475353 377307;377308 377307 2 VIVGGSSEYK Unmodified 1037.5393 0.53932542 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 28.17 28.264 2 0.019804 30437 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 47.603 21.188 76950000 0 0 0 0 14912000 21274000 17492000 0 12427000 0 0 10845000 0 0 0 56469 2431 50753 475354;475355;475356;475357;475358 377309 377309 1 VIVMPTTK Unmodified 887.51502 0.51502492 4626 Q9NSE4 IARS2 Isoleucine--tRNA ligase, mitochondrial yes yes 0 0 0 By matching By MS/MS By matching 2 0 3 1 1 1 48.258 42.458 2 0.031271 55692 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.189 58.642 103450000 18579000 82819000 2047800 0 0 0 0 0 0 0 0 0 0 0 0 56470 4626 50754 475359;475360;475361 377310 377310 1 VIVMSATLDAGK Oxidation (M) 1219.6482 0.64822394 295 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.57 3.96 3 4 1 1 1 1 1 1 1 46.821 44.558 2 2.7391E-05 57355 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.26 93.474 173710000 8253000 143560000 4892100 0 0 2655600 0 0 0 3325600 0 5536900 0 0 5486100 56471 295 50755 475362;475363;475364;475365;475366;475367;475368 377311;377312;377313;377314;377315 377313 382 5 VIVMSATLDAGK Unmodified 1203.6533 0.65330932 295 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes yes 0 0 0 By MS/MS By MS/MS 2.2 0.4 4 1 3 2 70.867 64.506 2 0.00013814 82521 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.048 61.653 17756000 4829500 12926000 0 0 0 0 0 0 0 0 0 0 0 0 0 56472 295 50755 475369;475370;475371;475372;475373 377316;377317;377318;377319 377316 4 VIVNPMDLETIRK Unmodified 1526.849 0.84904901 1127 P21675 TAF1 Transcription initiation factor TFIID subunit 1 yes yes 0 0 1 By MS/MS 2 0 1 1 82.97 74.84 3 0.0088085 97897 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 36.292 27.01 20115000 20115000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56473 1127 50756 475374 377320 377320 1 VIVNSLK Unmodified 771.48544 0.48543935 2307 Q13510 ASAH1 Acid ceramidase;Acid ceramidase subunit alpha;Acid ceramidase subunit beta yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 32.361 32.52 2 0.030787 35883 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 74.415 7.3804 124530000 0 0 0 31036000 6259400 7376100 8769700 8893600 5170400 14291000 9611200 26661000 0 0 6462600 56474 2307 50757 475375;475376;475377;475378;475379;475380;475381;475382;475383;475384 377321 377321 1 VIVPNMEFR Oxidation (M) 1119.5747 0.57466507 1754 P55060 CSE1L Exportin-2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 54.279 54.254 2 0.014133 61815 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 52.255 31.696 156300000 0 0 0 0 21314000 58351000 0 0 0 46765000 0 0 0 29865000 0 56475 1754 50758 475385;475386;475387;475388;475389 377322;377323;377324 377322 2865 3 VIVPNMEFR Unmodified 1103.5798 0.57975044 1754 P55060 CSE1L Exportin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.145 74.206 2 0.0031541 85423 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 92.439 75.054 788380000 0 0 0 31659000 28342000 107470000 41985000 56209000 28428000 90223000 71017000 72011000 36876000 67165000 156990000 56476 1754 50758 475390;475391;475392;475393;475394;475395;475396;475397;475398;475399;475400;475401 377325;377326;377327;377328;377329;377330;377331;377332;377333;377334;377335;377336 377326 11 VIVQFQPSSVPDEWGTTQDGQTRPR Unmodified 2827.3889 0.38891979 5301 Q9Y6Y8 SEC23IP SEC23-interacting protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 78.856 79 3 4.9634E-62 90980 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 113.26 92.834 164140000 0 0 0 0 0 11660000 5412000 16083000 15430000 15841000 11705000 18711000 10296000 9112700 49887000 56477 5301 50759 475402;475403;475404;475405;475406;475407;475408;475409;475410;475411 377337;377338;377339;377340;377341;377342;377343;377344;377345;377346;377347;377348 377341 12 VIVQLVTNGK Unmodified 1069.6495 0.64954457 1096 P19838 NFKB1 Nuclear factor NF-kappa-B p105 subunit;Nuclear factor NF-kappa-B p50 subunit yes yes 0 0 0 By MS/MS By MS/MS By matching 2.25 0.433 3 1 1 2 1 63.233 57.544 2 0.0067293 77272 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.311 24.968 57608000 39575000 14534000 3498500 0 0 0 0 0 0 0 0 0 0 0 0 56478 1096 50760 475412;475413;475414;475415 377349;377350;377351 377351 2 VIVVGNPANTNCLTASK Unmodified 1756.9142 0.91416847 1422 P40925 MDH1 Malate dehydrogenase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.11 3.8 6 1 12 2 3 2 1 1 1 1 1 1 1 1 1 1 1 1 64.392 62.315 2;3 4.3791E-75 79027 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 222.25 205.62 3679500000 359970000 2855100000 23514000 9424000 6610800 7489700 5962800 6932100 3901400 11001000 76454000 63322000 6687300 57761000 185390000 56479 1422 50761 475416;475417;475418;475419;475420;475421;475422;475423;475424;475425;475426;475427;475428;475429;475430;475431;475432;475433;475434 377352;377353;377354;377355;377356;377357;377358;377359;377360;377361;377362;377363;377364;377365;377366;377367;377368;377369;377370;377371;377372;377373;377374;377375 377356 24 VIWLQSVR Unmodified 999.58655 0.58655038 4556 Q9NPQ8 RIC8A Synembryn-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.242 73.309 2 0.012197 84351 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 75.189 58.263 162890000 0 0 0 8495900 7546800 17649000 9560300 11129000 8978400 18274000 16432000 16465000 14260000 11658000 22445000 56480 4556 50762 475435;475436;475437;475438;475439;475440;475441;475442;475443;475444;475445;475446 377376;377377;377378;377379;377380;377381;377382;377383 377379 7 VIYDFIEK Unmodified 1025.5433 0.54334816 147 O00401 WASL Neural Wiskott-Aldrich syndrome protein yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.061 71.135 2 0.033014 80830 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 53.968 34.046 74389000 0 0 0 4107100 5870100 6628800 6646400 3900100 4840000 5545700 6988800 6819800 5060400 6077200 11905000 56481 147 50763 475447;475448;475449;475450;475451;475452;475453;475454;475455;475456;475457;475458 377384;377385;377386 377385 3 VIYEGLTNYEK Unmodified 1327.666 0.66598249 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 61.166 61.259 2 0.00050177 69965 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 98.048 86.455 143230000 0 0 0 6141900 7162200 11093000 9526100 28917000 7805200 12785000 14310000 12057000 11526000 0 21911000 56482 5189 50764 475459;475460;475461;475462;475463;475464;475465;475466;475467;475468;475469 377387;377388;377389;377390;377391;377392;377393;377394;377395;377396;377397 377387 11 VIYHLDEEETPYLVK Unmodified 1846.9353 0.93528106 198 O14641 DVL2 Segment polarity protein dishevelled homolog DVL-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 75.031 73.962 3 1.2243E-10 92986 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.83 95.071 192860000 9932800 57455000 23615000 0 0 13646000 4739600 6395000 7368300 10524000 9865600 10198000 6738800 7707700 24671000 56483 198 50765 475470;475471;475472;475473;475474;475475;475476;475477;475478;475479;475480;475481;475482 377398;377399;377400;377401;377402;377403;377404;377405;377406;377407;377408;377409;377410;377411 377400 13 VIYPGLPSHPQHELVK Unmodified 1812.9887 0.98865404 1325 P32929 CTH Cystathionine gamma-lyase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 2 6 2 1 1 1 1 1 1 62.615 60.794 3;4 0.0033601 67137 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 27.94 23.775 550830000 450270000 0 0 0 0 4148500 0 0 0 0 10859000 10570000 6506000 13263000 55217000 56484 1325 50766 475483;475484;475485;475486;475487;475488;475489;475490 377412;377413;377414;377415;377416;377417 377412 6 VIYVLPMLTIK Oxidation (M) 1304.7778 0.77778155 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 89.574 89.66 2 0.0068744 103748 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.536 39.574 18856000 0 0 0 0 791360 0 0 2248000 0 0 2940700 0 0 0 12876000 56485 4819 50767 475491;475492;475493;475494 377418;377419;377420 377418 6192 3 VIYVLPMLTIK Unmodified 1288.7829 0.78286693 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 97.455 93.467 2 0.0068368 111027 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.549 41.056 14684000 11904000 0 0 0 0 0 0 0 0 0 0 0 0 0 2780500 56486 4819 50767 475495;475496 377421;377422 377421 2 VKDDIESLHDK Unmodified 1297.6514 0.65139506 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 21.397 21.662 3 0.042118 21369 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 25.014 18.578 309270000 0 0 0 0 0 41205000 23533000 32781000 10951000 36007000 0 40663000 40892000 37384000 45856000 56487 2392 50768 475497;475498;475499;475500;475501;475502;475503;475504;475505 377423 377423 1 VKDPHYAEMEEK Unmodified 1474.6762 0.67622961 2201 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 19.648 19.867 3 0.013383 20670 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 40.767 25.228 21932000 0 0 0 2957300 3052500 0 0 0 0 3196800 0 5041900 4080900 0 3602200 56488 2201 50769 475506;475507;475508;475509;475510;475511 377424;377425;377426 377425 3 VKDPTEEATPTPFGK Unmodified 1615.8094 0.80935227 4370 Q9H2M9 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 7.86 3.4 2 2 10 4 1 1 1 1 1 1 1 1 1 1 47.819 46.381 2;3 9.6946E-05 60632 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.57 70.248 290060000 0 124130000 0 12870000 10748000 0 17075000 17514000 8465200 15955000 17588000 0 20234000 15921000 29560000 56489 4370 50770 475512;475513;475514;475515;475516;475517;475518;475519;475520;475521;475522;475523;475524;475525 377427;377428;377429;377430;377431;377432;377433 377427 6 VKEDPDGEHAR Unmodified 1251.5844 0.58437813 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 0 1 By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 5.6786 5.7698 3 0.00036323 3484 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 81.92 72.077 203490000 0 0 0 2895200 34288000 0 30306000 37381000 20483000 0 0 26665000 29472000 0 21998000 56490 1681 50771 475526;475527;475528;475529;475530;475531;475532;475533 377434;377435 377435 2 VKEDPDGEHARR Unmodified 1407.6855 0.68548916 1681 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 5.5539 5.6713 3 0.00099583 3525 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 87.363 46.08 218880000 0 0 0 16356000 18601000 13525000 21184000 33750000 8833000 15113000 17596000 22682000 21882000 13171000 16184000 56491 1681 50772 475534;475535;475536;475537;475538;475539;475540;475541;475542;475543;475544;475545 377436;377437;377438;377439;377440 377440 5 VKEEESLENISSVK Unmodified 1589.8148 0.81483158 2484 Q15042 RAB3GAP1 Rab3 GTPase-activating protein catalytic subunit yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 52.41 47.066 3 0.00068249 58275 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 54.898 42.921 74443000 0 74443000 0 0 0 0 0 0 0 0 0 0 0 0 0 56492 2484 50773 475546;475547 377441;377442 377442 2 VKEPSVQEATSTSDILK Unmodified 1830.9575 0.95747307 3279 Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 yes yes 0 0 1 By MS/MS 3 0 1 1 63.124 58.359 3 0.029764 71770 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 27.271 23.028 4825500 0 4825500 0 0 0 0 0 0 0 0 0 0 0 0 0 56493 3279 50774 475548 377443 377443 0 VKGDVDVSLPK Unmodified 1155.6499 0.6499385 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 1 2 2 2 2 2 2 2 2 2 43.351 43.571 2;3 0.014209 47851 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 42.426 17.961 458540000 0 0 0 25281000 4616800 0 33422000 31572000 24261000 25308000 36292000 87998000 58064000 48433000 83291000 56494 2172 50775 475549;475550;475551;475552;475553;475554;475555;475556;475557;475558;475559;475560;475561;475562;475563;475564;475565;475566;475567;475568;475569 377444;377445;377446 377444 2 VKGEYDVTVPK Unmodified 1233.6605 0.66050319 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 38.256 38.393 3 0.0435 43268 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 32.859 21.624 82752000 0 0 0 7111700 5568600 3063900 9801300 9775200 6194700 0 0 14515000 13287000 0 13434000 56495 2172 50776 475570;475571;475572;475573;475574;475575;475576;475577;475578 377447 377447 1 VKPAPDETSFSEALLK Unmodified 1730.9091 0.90906631 2206 Q12905 ILF2 Interleukin enhancer-binding factor 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.712 71.779 3 3.5811E-05 82175 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 74.428 67.7 1197500000 0 0 0 67572000 67466000 92648000 74013000 73708000 64376000 123490000 92082000 113020000 117880000 121380000 189860000 56496 2206 50777 475579;475580;475581;475582;475583;475584;475585;475586;475587;475588;475589;475590 377448;377449;377450;377451;377452;377453;377454;377455;377456;377457;377458 377452 7 VKPFMTGAAEQIK Unmodified 1418.7592 0.75917137 984 P13693;Q56UQ5 TPT1 Translationally-controlled tumor protein;TPT1-like protein yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 50.693 50.906 3 0.00057223 56175 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.314 52.541 135450000 0 0 0 7776600 0 0 6509000 0 0 0 0 31751000 0 0 89417000 56497 984 50778 475591;475592;475593;475594 377459;377460;377461 377459 3 VKPLQDQNELFGK Unmodified 1514.8093 0.80929269 2202 Q12874 SF3A3 Splicing factor 3A subunit 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 2 1 1 1 1 53.292 53.555 2;3 0.00042476 61047 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 58.32 47.376 215350000 0 0 0 0 18890000 0 31041000 25063000 0 0 46720000 27721000 26579000 15601000 23732000 56498 2202 50779 475595;475596;475597;475598;475599;475600;475601;475602;475603 377462;377463;377464;377465;377466;377467;377468;377469;377470 377469 8 VKPPFIPTIR Unmodified 1166.7176 0.71756456 2604 Q16513 PKN2 Serine/threonine-protein kinase N2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 72.442 72.607 3 0.0077986 83346 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 43.77 39.916 191910000 0 0 0 0 0 40237000 20648000 17262000 0 25437000 20911000 0 19305000 16033000 32081000 56499 2604 50780 475604;475605;475606;475607;475608;475609;475610;475611;475612 377471;377472;377473;377474;377475;377476;377477 377474 7 VKPPVRNPQNSTVLAR Unmodified 1775.0166 0.016600123 2289 Q13428 TCOF1 Treacle protein yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 34.743 34.923 3;4 1.0519E-06 37158 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 67.646 66.159 841920000 0 0 0 53930000 22870000 62777000 73511000 58032000 65047000 64872000 103210000 101710000 83745000 56343000 95869000 56500 2289 50781 475613;475614;475615;475616;475617;475618;475619;475620;475621;475622;475623;475624;475625;475626;475627;475628;475629;475630;475631;475632;475633;475634;475635;475636 377478;377479;377480;377481;377482;377483;377484;377485 377485 7 VKPQFQEILR Unmodified 1256.7241 0.7241065 4807 Q9P260 KIAA1468 LisH domain and HEAT repeat-containing protein KIAA1468 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 58.398 58.656 3 0.0058469 66656 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 59.426 50.939 42974000 0 0 0 0 0 5539200 3118800 3486900 3590900 3764100 3123400 5844200 3718100 2890800 7897100 56501 4807 50782 475637;475638;475639;475640;475641;475642;475643;475644;475645;475646 377486;377487;377488;377489;377490;377491 377486 6 VKPQPPLSDAYLSGMPAK Unmodified 1897.9972 0.99716981 1502 P46379 BAG6 Large proline-rich protein BAG6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.74 2 1 17 1 2 1 1 1 1 2 1 2 1 1 2 2 2 72.128 71.398 2;3 1.2885E-07 81705 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 60.093 49.718 597920000 113030000 67990000 0 13640000 16154000 27695000 15068000 43843000 15319000 37151000 41436000 56522000 33358000 43862000 72849000 56502 1502 50783 475647;475648;475649;475650;475651;475652;475653;475654;475655;475656;475657;475658;475659;475660;475661;475662;475663;475664;475665;475666 377492;377493;377494;377495;377496;377497;377498;377499;377500;377501;377502;377503;377504;377505;377506;377507;377508;377509;377510;377511 377500 20 VKPQPPLSDAYLSGMPAK Oxidation (M) 1913.9921 0.99208444 1502 P46379 BAG6 Large proline-rich protein BAG6 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 60.712 60.821 3 0.00043199 68566 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.477 39.43 121350000 0 0 0 0 25329000 0 0 32114000 0 0 0 0 0 30800000 33102000 56503 1502 50783 475667;475668;475669;475670 377512;377513 377512 2376 1 VKVEEEEEEK Unmodified 1246.5929 0.59287713 5125 Q9Y2X3 NOP58 Nucleolar protein 58 yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 11.668 11.243 2 0.04348 9407 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.355 63.796 40060000 0 7402600 0 3518100 2235900 1262200 2976100 2411900 1151800 2889300 0 5971700 3337500 2717300 4185300 56504 5125 50784 475671;475672;475673;475674;475675;475676;475677;475678;475679;475680;475681;475682;475683 377514;377515 377515 2 VKYETELAMR Unmodified 1238.6329 0.63290823 814 P05783 KRT18 Keratin, type I cytoskeletal 18 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 43.048 43.222 3 0.0059539 47624 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 59.04 49.353 135050000 0 0 0 8309700 5693000 0 10378000 9285700 0 12141000 15642000 39628000 0 12690000 21282000 56505 814 50785 475684;475685;475686;475687;475688;475689;475690;475691;475692 377516;377517;377518;377519 377518 4 VKYETELAMR Oxidation (M) 1254.6278 0.62782285 814 P05783 KRT18 Keratin, type I cytoskeletal 18 no no 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 1 2 2 2 2 2 2 1 2 2 31.886 32.075 2;3 0.0027983 35471 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 60.754 52.472 396040000 0 0 0 28288000 39055000 11238000 45613000 21033000 14190000 26915000 47613000 82868000 24948000 24563000 29721000 56506 814 50785 475693;475694;475695;475696;475697;475698;475699;475700;475701;475702;475703;475704;475705;475706;475707;475708;475709;475710;475711;475712;475713;475714 377520;377521 377521 982 1 VLAAGGLGQGGGGGQSSVLSGISLYDPR Unmodified 2572.3245 0.32452862 5059 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 yes yes 0 0 0 By MS/MS 10 0 1 1 87.405 87.563 3 3.7388E-06 101287 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.158 27.166 3807200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3807200 56507 5059 50786 475715 377522 377522 1 VLAALAASSGSSSASSSSAPVAASSGQATTQSK Unmodified 2923.4371 0.43705178 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 58.597 58.782 3 2.8602E-25 66055 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 53.073 49.975 48816000 0 0 0 0 3476600 6141800 3371400 3248900 2191800 5042100 4442800 4356800 4404900 4593000 7546200 56508 2775 50787 475716;475717;475718;475719;475720;475721;475722;475723;475724;475725;475726 377523;377524;377525;377526;377527;377528;377529;377530;377531 377529 9 VLAALQER Unmodified 898.52362 0.52361577 4057 Q99733 NAP1L4 Nucleosome assembly protein 1-like 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.209 39.389 2 0.0053838 43135 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 127.12 62.314 470420000 0 0 0 23920000 19733000 20860000 20670000 29068000 16402000 29163000 61917000 65339000 39803000 38898000 104650000 56509 4057 50788 475727;475728;475729;475730;475731;475732;475733;475734;475735;475736;475737;475738 377532;377533;377534;377535;377536;377537;377538;377539;377540 377539 3 VLAAQETHEGVTEDGIEDAFEVLGEIQEIVK Unmodified 3367.6671 0.66711129 1358 P35606 COPB2 Coatomer subunit beta' yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 103.5 97.658 3;4 8.3715E-58 122919 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.52 103.83 517530000 485980000 29402000 2140800 0 0 0 0 0 0 0 0 0 0 0 0 56510 1358 50789 475739;475740;475741;475742 377541;377542;377543;377544;377545 377541 5 VLAATAPTPGIPILQSVPSAPPPK Unmodified 2321.3359 0.33586858 3968 Q96RK0 CIC Protein capicua homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 2 2 1 1 1 1 1 1 1 2 2 89.659 89.743 2;3 4.656E-08 103948 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 36.9 32.143 83360000 0 0 0 0 5434900 8260400 3820300 8405000 5023800 11075000 6157500 10207000 5264400 4942700 14769000 56511 3968 50790 475743;475744;475745;475746;475747;475748;475749;475750;475751;475752;475753;475754;475755;475756;475757 377546;377547;377548;377549;377550;377551;377552;377553;377554;377555;377556 377546 11 VLAAVQAAR Unmodified 897.5396 0.53960019 4641 Q9NU22 MDN1 Midasin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 31.48 31.712 2 0.035645 33199 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 46.016 28.168 33628000 0 0 0 0 3874600 0 3515400 3704500 0 0 4962200 7802000 4261200 5508400 0 56512 4641 50791 475758;475759;475760;475761;475762;475763;475764 377557;377558 377557 2 VLAAVYK Unmodified 762.46398 0.46397563 771;897 P04075;P05062;P09972 ALDOA;ALDOB;ALDOC Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase B;Fructose-bisphosphate aldolase C no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.08 3.93 10 2 12 4 6 2 1 1 1 1 1 1 1 1 1 1 1 1 38.839 36.984 2 0.034105 43658 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 85.306 10.475 22342000000 11893000000 6597100000 1478300000 117810000 35547000 53917000 57016000 62901000 37912000 73704000 255640000 239690000 66266000 266830000 1105900000 56513 771;897 50792 475765;475766;475767;475768;475769;475770;475771;475772;475773;475774;475775;475776;475777;475778;475779;475780;475781;475782;475783;475784;475785;475786;475787;475788 377559;377560;377561;377562;377563;377564;377565;377566;377567;377568;377569;377570;377571;377572;377573 377571 15 VLACPFLR Unmodified 974.53716 0.53715735 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.895 67.976 2 0.0068885 77719 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 92.191 63.936 137330000 0 0 0 4557400 9713700 10616000 6055200 10909000 8243100 9746900 12353000 17352000 18734000 16159000 12888000 56514 3023 50793 475789;475790;475791;475792;475793;475794;475795;475796;475797;475798;475799;475800 377574;377575;377576;377577;377578;377579;377580;377581;377582;377583;377584;377585;377586 377577 13 VLADLGRK Unmodified 870.5287 0.52870115 1826 P61011 SRP54 Signal recognition particle 54 kDa protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.989 24.194 2 0.042543 25712 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 115.46 22.992 251020000 0 0 0 12104000 13792000 24003000 20382000 24809000 14218000 22959000 13244000 22214000 26955000 23048000 33292000 56515 1826 50794 475801;475802;475803;475804;475805;475806;475807;475808;475809;475810;475811;475812 377587;377588 377588 1 VLADPSDDTK Unmodified 1059.5084 0.50841922 2501;1802 Q15149;P58107 PLEC;EPPK1 Plectin;Epiplakin no no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 20.486 20.649 2 0.0015191 21052 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 92.838 76.298 693310000 0 0 0 87989000 58422000 56849000 51132000 45288000 36755000 54225000 70373000 98594000 80045000 53642000 0 56516 2501;1802 50795 475813;475814;475815;475816;475817;475818;475819;475820;475821;475822;475823 377589;377590;377591;377592;377593;377594;377595;377596;377597 377592 8 VLAEIPRPLK Unmodified 1134.7125 0.71247918 3542 Q8WUF5 PPP1R13L RelA-associated inhibitor yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.112 59.221 2 0.036423 66432 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.318 65.759 164420000 0 0 0 6884500 7359200 10357000 11966000 9585300 11740000 14168000 18644000 12671000 17754000 9642300 33649000 56517 3542 50796 475824;475825;475826;475827;475828;475829;475830;475831;475832;475833;475834;475835 377598;377599 377598 2 VLAELYVSDREGSDATGDGTK Unmodified 2182.039 0.038970866 366 O43776 NARS Asparagine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 3.5 2.93 4 1 1 3 1 1 1 65.03 58.746 3 1.0621E-10 79018 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 92.492 83.122 171760000 99587000 39844000 32332000 0 0 0 0 0 0 0 0 0 0 0 0 56518 366 50797 475836;475837;475838;475839;475840;475841 377600;377601;377602;377603;377604;377605;377606;377607 377604 8 VLAEMREQYEAMAER 2 Oxidation (M) 1856.8397 0.83968289 73;981 CON__P13646-1;P13646;CON__ENSEMBL:ENSP00000377550 KRT13 Keratin, type I cytoskeletal 13 no no 0 2 1 By matching By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 33.578 33.748 3 5.6576E-05 36983 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 71.692 55.385 + 101250000 0 0 0 0 7378600 0 25296000 35379000 0 0 0 16411000 16784000 0 0 56519 73;981 50798 475842;475843;475844;475845;475846 377608;377609 377608 92;96 2 VLAETPDSFEK Unmodified 1234.6081 0.60813326 4023 Q99567 NUP88 Nuclear pore complex protein Nup88 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.289 49.447 2 9.2754E-16 55591 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 163.16 128.77 1027000000 0 0 0 49128000 53674000 91134000 84106000 92719000 94860000 74870000 91377000 109750000 95776000 84392000 105260000 56520 4023 50799 475847;475848;475849;475850;475851;475852;475853;475854;475855;475856;475857;475858 377610;377611;377612;377613;377614;377615;377616;377617;377618;377619;377620;377621;377622;377623;377624;377625;377626 377618 17 VLAGAVIGDGQSAVASNIANTTYR Unmodified 2347.2132 0.21318726 4286 Q9C0C7 AMBRA1 Activating molecule in BECN1-regulated autophagy protein 1 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 80.081 80.228 3 4.7993E-08 92800 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 52.061 43.461 8886000 0 0 0 0 0 0 0 0 0 4945800 3940300 0 0 0 0 56521 4286 50800 475859;475860 377627 377627 1 VLAGETLSVNDPPDVLDR Unmodified 1908.9793 0.97927114 2207 Q12906 ILF3 Interleukin enhancer-binding factor 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 2 2 2 1 2 2 2 1 2 2 2 79.586 79.656 2;3 1.3896E-61 92145 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 206.18 191.92 307730000 0 0 0 8601700 20146000 29613000 14534000 10443000 16272000 42706000 34102000 28653000 22116000 29831000 50715000 56522 2207 50801 475861;475862;475863;475864;475865;475866;475867;475868;475869;475870;475871;475872;475873;475874;475875;475876;475877;475878;475879;475880;475881 377628;377629;377630;377631;377632;377633;377634;377635;377636;377637;377638;377639;377640 377633 13 VLAGETLSVNDPPDVLDRQK Unmodified 2165.1328 0.13281167 2207 Q12906 ILF3 Interleukin enhancer-binding factor 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 74.777 74.208 3 9.2791E-09 93791 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.447 60.728 275010000 73169000 0 0 4196900 8985400 14851000 12191000 10475000 15928000 23892000 16145000 23954000 14292000 20917000 36008000 56523 2207 50802 475882;475883;475884;475885;475886;475887;475888;475889;475890;475891;475892;475893;475894 377641;377642 377641 1 VLAGLYMGR Unmodified 978.53207 0.53207197 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 63.74 63.837 2 0.0094557 72124 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 66.682 38.17 29463000 0 0 0 0 3156100 3916400 2492400 3824700 0 3565000 0 0 0 4453800 8055100 56524 3641 50803 475895;475896;475897;475898;475899;475900;475901;475902 377643;377644;377645;377646 377645 4 VLAGLYMGR Oxidation (M) 994.52699 0.52698659 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 49.723 49.827 2 0.026629 56309 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 44.395 24.758 50521000 0 0 0 0 11051000 0 10183000 0 9545600 0 0 0 0 0 19741000 56525 3641 50803 475903;475904;475905;475906 377647;377648 377647 2 VLAIAQNFV Unmodified 973.55967 0.55966693 2919 Q6P1L8 MRPL14 39S ribosomal protein L14, mitochondrial yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 89.558 85.504 2 0.029555 106038 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.994 44.371 19547000 0 19547000 0 0 0 0 0 0 0 0 0 0 0 0 0 56526 2919 50804 475907;475908 377649 377649 1 VLAINILGR Unmodified 967.61785 0.61785051 362 O43747 AP1G1 AP-1 complex subunit gamma-1 yes yes 0 0 0 By MS/MS By matching By matching By matching 10 0 4 1 1 1 1 81.163 81.266 2 0.02254 94073 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.43 21.245 9534100 0 0 0 0 0 3794400 0 1646700 0 2420800 0 0 0 1672200 0 56527 362 50805 475909;475910;475911;475912 377650 377650 1 VLALELFEQITK Unmodified 1402.8072 0.80716742 1091 P19525 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase yes yes 0 0 0 By MS/MS 2 0 1 1 100.35 92.224 2 0.01234 118853 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.006 59.799 6912500 6912500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56528 1091 50806 475913 377651 377651 1 VLALLDVPDK Unmodified 1081.6383 0.63831118 4719 Q9NX62 IMPAD1 Inositol monophosphatase 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 83.172 79.555 2 0.0067891 99038 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.972 15.28 43972000 0 40019000 3953100 0 0 0 0 0 0 0 0 0 0 0 0 56529 4719 50807 475914;475915;475916;475917;475918;475919;475920 377652;377653;377654;377655;377656;377657 377654 6 VLALPEPSPAAPTLR Unmodified 1530.877 0.87697832 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.724 79.783 2 4.1867E-15 92267 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 99.522 79.761 232840000 0 0 0 22864000 16237000 19861000 15642000 16518000 11857000 20936000 21855000 26740000 16555000 17468000 26304000 56530 2501 50808 475921;475922;475923;475924;475925;475926;475927;475928;475929;475930;475931;475932 377658;377659;377660;377661;377662;377663;377664;377665;377666;377667;377668;377669 377663 12 VLALSQHK Unmodified 894.5287 0.52870115 3479 Q8TB72 PUM2 Pumilio homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 19.667 19.935 2 0.030197 20347 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 55.676 35.121 31454000 0 0 0 1870900 0 0 2969600 2649600 2317600 3157800 3278400 4168700 3984700 2752400 4303900 56531 3479 50809 475933;475934;475935;475936;475937;475938;475939;475940;475941;475942 377670;377671;377672;377673 377670 4 VLAMSGDPNYLHR Unmodified 1471.7242 0.72418285 1271 P30153 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 1 2 2 2 1 2 2 2 2 2 2 55.072 55.27 2;3 0.0011522 62697 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 52.495 47.4 420500000 0 0 0 15032000 13370000 33075000 26740000 32977000 11581000 30371000 56486000 47785000 22099000 33723000 97264000 56532 1271 50810 475943;475944;475945;475946;475947;475948;475949;475950;475951;475952;475953;475954;475955;475956;475957;475958;475959;475960;475961;475962;475963 377674;377675;377676;377677;377678;377679;377680;377681;377682;377683;377684;377685;377686 377681 12 VLAMSGDPNYLHR Oxidation (M) 1487.7191 0.71909747 1271 P30153 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 2 40.638 40.956 2;3 1.0593E-08 45646 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 105.65 91.685 376570000 0 0 0 21203000 0 45111000 0 25762000 0 7646500 56844000 63155000 31693000 38089000 87066000 56533 1271 50810 475964;475965;475966;475967;475968;475969;475970;475971;475972;475973 377687;377688;377689;377690;377691;377692;377693;377694;377695;377696 377692 1880 5 VLANNSLSFEK Unmodified 1220.6401 0.6401021 578 O76094 SRP72 Signal recognition particle subunit SRP72 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 54.709 53.394 2 1.4451E-12 60986 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 157.96 109.39 1401700000 23768000 536730000 8416000 57814000 55097000 55187000 71958000 82747000 46629000 84611000 73520000 79206000 95584000 50758000 79656000 56534 578 50811 475974;475975;475976;475977;475978;475979;475980;475981;475982;475983;475984;475985;475986;475987;475988;475989 377697;377698;377699;377700;377701;377702;377703;377704;377705;377706;377707;377708;377709;377710;377711;377712;377713;377714;377715;377716;377717;377718;377719;377720 377713 24 VLANPGNSQVAR Unmodified 1224.6575 0.65748349 2457 Q14974 KPNB1 Importin subunit beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.385 27.583 2 2.2296E-06 29459 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 125.97 92.591 1111800000 0 0 0 48510000 45942000 106380000 80092000 56794000 44276000 96500000 157550000 136860000 87594000 91187000 160100000 56535 2457 50812 475990;475991;475992;475993;475994;475995;475996;475997;475998;475999;476000;476001 377721;377722;377723;377724;377725;377726;377727;377728;377729;377730;377731;377732;377733 377723 13 VLANQYK Unmodified 834.45995 0.45995289 1283 P30520 ADSS Adenylosuccinate synthetase isozyme 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.87 3.84 5 1 9 2 3 1 1 1 1 1 1 1 1 1 1 17.282 15.927 1;2 3.2817E-06 20402 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 203.58 123.2 799950000 94919000 630660000 8554200 0 0 1894600 2810400 1179100 0 2197700 11119000 7885800 5169100 9295600 24264000 56536 1283 50813 476002;476003;476004;476005;476006;476007;476008;476009;476010;476011;476012;476013;476014;476015;476016 377734;377735;377736;377737;377738;377739;377740;377741;377742;377743 377735 8 VLAPELIPSILEK Unmodified 1420.8541 0.85411762 1636 P50748 KNTC1 Kinetochore-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.18 3.74 3 1 7 1 2 1 1 1 1 1 1 1 1 94.218 92.61 2 0.0010352 107823 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 66.056 48.192 290890000 36926000 223480000 9746500 0 0 2239400 0 1609000 1492900 4773600 2156300 0 0 1808000 6661100 56537 1636 50814 476017;476018;476019;476020;476021;476022;476023;476024;476025;476026;476027 377744;377745;377746;377747;377748;377749;377750;377751;377752;377753;377754 377745 10 VLAPPPEEVQK Unmodified 1205.6656 0.66558856 4631 Q9NSY0 NRBP2 Nuclear receptor-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 42.01 42.258 2 0.0064345 46229 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 56.563 36.776 53878000 0 0 0 0 3104900 6327800 5032900 0 3178600 5903300 7896400 5197500 5165900 5367500 6703800 56538 4631 50815 476028;476029;476030;476031;476032;476033;476034;476035;476036;476037 377755;377756 377756 2 VLAPQISFAPEIASEEERK Unmodified 2113.1055 0.10553429 1032 P16083 NQO2 Ribosyldihydronicotinamide dehydrogenase [quinone] yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 6.83 3.76 3 2 7 2 2 1 1 1 1 1 1 1 1 83.138 81.379 3 2.8869E-65 93804 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 160.97 136.93 1763300000 166920000 961260000 440890000 0 0 0 0 4953800 2437500 5422000 19608000 32032000 0 20146000 109670000 56539 1032 50816 476038;476039;476040;476041;476042;476043;476044;476045;476046;476047;476048;476049 377757;377758;377759;377760;377761;377762;377763;377764;377765;377766;377767;377768;377769;377770;377771;377772;377773;377774 377762 18 VLAQNSGFDLQETLVK Unmodified 1760.9309 0.93086439 1410 P40227 CCT6A T-complex protein 1 subunit zeta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.78 3.55 8 1 23 7 2 2 2 2 2 2 2 2 2 2 2 2 1 81.352 80.515 2;3 3.6099E-61 93161 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 177.93 151.99 15197000000 0 13756000000 122810000 19508000 66166000 143410000 57423000 102640000 94486000 260520000 194090000 163400000 67223000 119700000 29067000 56540 1410 50817 476050;476051;476052;476053;476054;476055;476056;476057;476058;476059;476060;476061;476062;476063;476064;476065;476066;476067;476068;476069;476070;476071;476072;476073;476074;476075;476076;476077;476078;476079;476080;476081 377775;377776;377777;377778;377779;377780;377781;377782;377783;377784;377785;377786;377787;377788;377789;377790;377791;377792;377793;377794;377795;377796;377797;377798;377799;377800 377789 23 VLAQQGEYSEAIPILR Unmodified 1785.9625 0.96249887 2402 Q14318 FKBP8 Peptidyl-prolyl cis-trans isomerase FKBP8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.408 82.469 2 2.6157E-50 95112 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 169.89 155.73 127280000 0 0 0 2724100 8329500 10399000 6026100 13036000 10066000 15717000 11769000 16660000 7546300 7370800 17640000 56541 2402 50818 476082;476083;476084;476085;476086;476087;476088;476089;476090;476091;476092;476093 377801;377802;377803;377804;377805;377806;377807;377808;377809;377810;377811;377812;377813;377814 377805 14 VLASLIIR Unmodified 883.58549 0.58548775 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.818 74.882 2 0.0068442 86236 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 94.262 47.891 56746000 0 0 0 1140000 3024400 4383400 2814300 3316800 3575300 8050700 3868300 6456600 4463400 5382500 10270000 56542 3676 50819 476094;476095;476096;476097;476098;476099;476100;476101;476102;476103;476104;476105 377815;377816;377817;377818;377819;377820;377821 377815 7 VLASNPITEAVGNAK Unmodified 1482.8042 0.80420731 4580 Q9NQX4 MYO5C Unconventional myosin-Vc yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 71.252 70.701 2 5.2212E-20 81161 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 113.47 95.608 143050000 0 30196000 0 6029900 10734000 9107000 8513500 6687200 6017300 12920000 11857000 16502000 9041400 6019700 9426000 56543 4580 50820 476106;476107;476108;476109;476110;476111;476112;476113;476114;476115;476116;476117;476118;476119 377822;377823;377824;377825;377826;377827;377828;377829;377830;377831;377832;377833;377834;377835;377836;377837 377830 16 VLASSPIMEAIGNAK Oxidation (M) 1515.7967 0.79667909 5006 Q9ULV0 MYO5B Unconventional myosin-Vb yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 70.413 70.447 2 5.26E-05 81070 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 72.652 54.788 9426400 0 0 0 0 3141700 0 0 2022500 0 0 0 4262200 0 0 0 56544 5006 50821 476120;476121;476122;476123 377838;377839 377838 6351 2 VLATAFDTTLGGR Unmodified 1320.7038 0.70376498 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 73.188 73.419 2 5.9001E-08 83852 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 128.03 100.92 192180000 0 0 0 0 0 0 0 0 0 0 33476000 34852000 12552000 25369000 85930000 56545 1337 50822 476124;476125;476126;476127;476128;476129;476130;476131 377840;377841;377842;377843;377844;377845;377846;377847;377848;377849 377841 10 VLATAFDTTLGGRK Unmodified 1448.7987 0.798728 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 2 2 1 2 1 1 1 1 1 1 2 2 65.439 63.605 2;3 4.3504E-12 86853 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 125.74 91.874 527050000 246160000 36167000 4069200 0 0 0 4000900 6189800 2464700 8631500 22645000 22204000 0 32843000 141670000 56546 1337 50823 476132;476133;476134;476135;476136;476137;476138;476139;476140;476141;476142;476143;476144;476145;476146;476147;476148 377850;377851;377852;377853;377854;377855;377856;377857;377858;377859;377860;377861;377862;377863;377864;377865;377866;377867 377859 14 VLATDFDDEFDDEEPLPAIGTCK Unmodified 2596.1527 0.15268 3979 Q96RU3 FNBP1 Formin-binding protein 1 yes yes 0 0 0 By MS/MS 3 0 1 1 90.473 87.26 3 0.0059028 104506 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 28.418 25.019 6190200 0 6190200 0 0 0 0 0 0 0 0 0 0 0 0 0 56547 3979 50824 476149 377868;377869 377869 2 VLATEDRSDHLIQTDTVNLHR Unmodified 2432.2408 0.24079899 1648 P51151 RAB9A Ras-related protein Rab-9A yes yes 0 0 1 By matching By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 55.684 56.046 4 0.012931 63322 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 26.754 18.466 45960000 0 0 0 0 0 7401600 0 0 5009700 0 0 12594000 0 0 20955000 56548 1648 50825 476150;476151;476152;476153 377870 377870 1 VLATETVSHK Unmodified 1083.5924 0.59242362 3373 Q8N999 C12orf29 Uncharacterized protein C12orf29 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17.536 16.924 2 0.00061836 23095 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.05 88.797 191940000 15253000 68231000 34691000 2902900 3759700 5189400 4524500 4320100 3685800 5825700 7474500 12283000 6591400 6435600 10776000 56549 3373 50826 476154;476155;476156;476157;476158;476159;476160;476161;476162;476163;476164;476165;476166;476167;476168 377871;377872;377873;377874;377875;377876;377877;377878;377879;377880;377881;377882 377873 9 VLATMERLEK Unmodified 1188.6536 0.65364367 4859 Q9UBT7 CTNNAL1 Alpha-catulin yes yes 0 0 1 By MS/MS 2 0 1 1 53.339 45.275 3 0.0048813 62243 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.167 34.275 39761000 39761000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56550 4859 50827 476169 377883 377883 1 VLATTFDPYLGGR Unmodified 1408.7351 0.73506511 686 O95757 HSPA4L Heat shock 70 kDa protein 4L yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 79.296 79.146 2 1.3447E-06 91074 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 112.13 74.654 177090000 0 0 5994800 4440100 0 11944000 0 11501000 7485000 14694000 22562000 22008000 10137000 17184000 49140000 56551 686 50828 476170;476171;476172;476173;476174;476175;476176;476177;476178;476179;476180 377884;377885;377886;377887;377888;377889;377890;377891;377892;377893;377894;377895;377896 377886 12 VLATTFDPYLGGRNFDEALVDYFCDEFK Unmodified 3301.5278 0.52778104 686 O95757 HSPA4L Heat shock 70 kDa protein 4L yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 100.47 94.695 3 1.3033E-66 119581 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 123.14 117.54 31053000 27667000 3386100 0 0 0 0 0 0 0 0 0 0 0 0 0 56552 686 50829 476181;476182 377897;377898 377898 2 VLATVTKPVGGDK Unmodified 1283.7449 0.74490152 2083 Q02878 RPL6 60S ribosomal protein L6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 6 24 3 2 1 2 2 2 2 2 2 2 2 2 2 2 2 32.197 31.472 2;3 1.3754E-08 33300 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 89.231 59.025 1106800000 139020000 37398000 19320000 54618000 70945000 28189000 71474000 73810000 25751000 86605000 81169000 162610000 76473000 79853000 99520000 56553 2083 50830 476183;476184;476185;476186;476187;476188;476189;476190;476191;476192;476193;476194;476195;476196;476197;476198;476199;476200;476201;476202;476203;476204;476205;476206;476207;476208;476209;476210;476211;476212 377899;377900;377901;377902;377903;377904;377905;377906;377907;377908;377909;377910;377911;377912;377913;377914;377915;377916;377917;377918;377919;377920;377921 377918 22 VLAVNQENEHLMEDYEK Unmodified 2059.9521 0.95207011 356 O43707 ACTN4 Alpha-actinin-4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.84 3.47 5 2 18 2 3 2 1 1 2 1 1 1 2 2 2 1 2 2 64.141 62.686 2;3 5.0028E-131 83354 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 267.11 220.52 3087600000 311330000 1896800000 137440000 17594000 11880000 56269000 13504000 21804000 12271000 42202000 85530000 73966000 23909000 71334000 311760000 56554 356 50831 476213;476214;476215;476216;476217;476218;476219;476220;476221;476222;476223;476224;476225;476226;476227;476228;476229;476230;476231;476232;476233;476234;476235;476236;476237 377922;377923;377924;377925;377926;377927;377928;377929;377930;377931;377932;377933;377934;377935;377936;377937;377938;377939;377940;377941;377942;377943;377944;377945 377935 24 VLAVNQENEHLMEDYEK Oxidation (M) 2075.947 0.94698474 356 O43707 ACTN4 Alpha-actinin-4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 6.04 3.8 7 5 11 2 8 2 2 1 1 1 1 2 1 1 1 52.411 49.716 2;3 1.6996E-70 61381 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 169.92 164.82 3299200000 251420000 2556000000 135670000 35182000 0 36114000 18830000 11022000 0 25900000 52795000 59375000 0 47081000 69828000 56555 356 50831 476238;476239;476240;476241;476242;476243;476244;476245;476246;476247;476248;476249;476250;476251;476252;476253;476254;476255;476256;476257;476258;476259;476260 377946;377947;377948;377949;377950;377951;377952;377953;377954;377955;377956;377957;377958;377959;377960;377961;377962;377963;377964;377965;377966 377956 455 21 VLAVNQENEQLMEDYEK Oxidation (M) 2066.9467 0.94665039 971 P12814 ACTN1 Alpha-actinin-1 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.2 3.82 3 2 5 1 4 1 1 1 1 1 61.475 58.683 2 6.897E-183 73874 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 245.69 237.93 491790000 6600800 437860000 0 0 0 6016500 0 0 0 0 7626200 12191000 0 4989000 16508000 56556 971 50832 476261;476262;476263;476264;476265;476266;476267;476268;476269;476270 377967;377968;377969;377970;377971;377972;377973;377974;377975 377968 1287 9 VLAVNQENEQLMEDYEK Unmodified 2050.9517 0.95173576 971 P12814 ACTN1 Alpha-actinin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.29 3.67 4 2 11 1 4 1 1 1 1 1 1 1 1 1 1 1 1 73.829 72.274 2;3 5.033E-276 89693 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 322.42 312.64 2739100000 28901000 2589900000 2532300 0 2996700 7378400 2913100 3694800 2716300 8417800 14049000 13336000 5160800 12364000 44795000 56557 971 50832 476271;476272;476273;476274;476275;476276;476277;476278;476279;476280;476281;476282;476283;476284;476285;476286;476287 377976;377977;377978;377979;377980;377981;377982;377983;377984;377985;377986;377987;377988;377989;377990;377991 377979 15 VLCELADLQDK Unmodified 1302.649 0.64895222 1067 P17987 TCP1 T-complex protein 1 subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.84 1 5 2 13 3 3 2 1 1 1 1 1 1 1 1 1 1 2 1 67.541 66.103 2 2.6041E-09 84802 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 142.43 118.4 4021100000 1588600 2776100000 77967000 38497000 51026000 138500000 72104000 57582000 53533000 136620000 100060000 132960000 92683000 100020000 191810000 56558 1067 50833 476288;476289;476290;476291;476292;476293;476294;476295;476296;476297;476298;476299;476300;476301;476302;476303;476304;476305;476306;476307;476308 377992;377993;377994;377995;377996;377997;377998;377999;378000;378001;378002;378003;378004;378005;378006;378007;378008;378009;378010;378011;378012;378013;378014;378015;378016;378017;378018 377997 24 VLCGDAGEDAECHAAK Unmodified 1701.7087 0.70866872 282 O15397 IPO8 Importin-8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 1 4 1 26.756 22.532 2;3 1.0064E-16 29712 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.38 97.166 167010000 7693900 157910000 1403200 0 0 0 0 0 0 0 0 0 0 0 0 56559 282 50834 476309;476310;476311;476312;476313;476314 378019;378020;378021;378022;378023 378019 5 VLCGGDIYVPEDPK Unmodified 1560.7494 0.74939455 1561 P49189 ALDH9A1 4-trimethylaminobutyraldehyde dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.87 3 5 1 1 1 1 1 1 1 1 68.374 66.275 2 0.00040798 75916 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.338 70.565 1045200000 20361000 983760000 2513200 9205600 0 0 0 0 0 0 8066500 4421600 0 5267500 11630000 56560 1561 50835 476315;476316;476317;476318;476319;476320;476321;476322 378024;378025;378026;378027;378028;378029;378030;378031 378025 7 VLCIIQDTTNSK Unmodified 1390.7126 0.71261511 3903 Q96K76 USP47 Ubiquitin carboxyl-terminal hydrolase 47 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 58.593 58.78 2 0.00021328 67073 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 103.26 67.311 56263000 0 0 0 0 2719200 5671200 3435600 2816400 2452600 5926600 7604000 5438500 3763000 6544100 9891100 56561 3903 50836 476323;476324;476325;476326;476327;476328;476329;476330;476331;476332;476333 378032;378033;378034;378035;378036;378037;378038;378039;378040;378041;378042 378034 11 VLCQFCDQDPAQDAVK Unmodified 1892.8397 0.83968289 273 O15344 MID1 E3 ubiquitin-protein ligase Midline-1 yes yes 0 0 0 By MS/MS 2 0 1 1 64.315 58.407 2 8.3775E-51 74792 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 178.1 169.69 24901000 0 24901000 0 0 0 0 0 0 0 0 0 0 0 0 0 56562 273 50837 476334 378043 378043 1 VLCYYGSQEERK Unmodified 1530.7137 0.71367774 4402 Q9H4L7 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 36.258 31.337 3 0.0070403 43756 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.448 47.3 15693000 7301400 0 8391400 0 0 0 0 0 0 0 0 0 0 0 0 56563 4402 50838 476335;476336 378044;378045;378046 378044 2 VLDAESMHDCVSVVK Unmodified 1687.7909 0.79094179 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 57.597 57.237 3 0.0016493 74121 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.071 49.506 189730000 0 50811000 0 0 9007300 16757000 5507600 0 5604200 11065000 18429000 17331000 9952100 13801000 31467000 56564 3119 50839 476337;476338;476339;476340;476341;476342;476343;476344;476345;476346;476347 378047;378048;378049;378050;378051 378049 4 VLDAESMHDCVSVVK Oxidation (M) 1703.7859 0.78585641 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.57 3.85 3 1 3 1 2 1 1 1 1 45.833 42.297 3 0.0001446 46455 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.894 55.58 68668000 7343100 30472000 5155800 0 0 0 0 0 8104900 0 0 0 0 0 17592000 56565 3119 50839 476348;476349;476350;476351;476352;476353;476354 378052;378053;378054;378055 378054 4737 4 VLDAIIQEK Unmodified 1027.5914 0.59136099 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 57.802 56.474 2 0.00063134 72895 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.19 70.4 1021100000 24708000 610660000 16439000 17767000 18801000 41111000 25005000 21326000 14996000 37555000 35395000 42156000 26548000 29327000 59288000 56566 4634 50840 476355;476356;476357;476358;476359;476360;476361;476362;476363;476364;476365;476366;476367;476368;476369;476370 378056;378057;378058;378059;378060;378061;378062;378063;378064;378065;378066;378067;378068;378069;378070 378059 14 VLDALVAR Unmodified 855.5178 0.51780212 3219 Q8IUR0 TRAPPC5 Trafficking protein particle complex subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.871 53.014 2 0.0051885 60266 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 127.84 47.467 467140000 0 0 0 21576000 22836000 34927000 28399000 27654000 23397000 53718000 63329000 52395000 49706000 29300000 59907000 56567 3219 50841 476371;476372;476373;476374;476375;476376;476377;476378;476379;476380;476381;476382 378071;378072;378073;378074;378075;378076;378077;378078 378073 7 VLDDGELLVQQTK Unmodified 1456.7773 0.77732386 1504 P46459 NSF Vesicle-fusing ATPase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 66.217 66.415 2 0.0052383 75143 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 65.056 54.824 13577000 0 0 0 0 0 0 0 0 0 0 0 0 0 13577000 0 56568 1504 50842 476383;476384;476385 378079;378080;378081 378080 3 VLDEFSK Unmodified 836.42798 0.42798405 288 O15498 YKT6 Synaptobrevin homolog YKT6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 36.752 36.206 2 0.029967 46147 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.006 22.647 620720000 0 309820000 11998000 21108000 15926000 33081000 40030000 18011000 18371000 34520000 28520000 30360000 33735000 25235000 0 56569 288 50843 476386;476387;476388;476389;476390;476391;476392;476393;476394;476395;476396;476397;476398 378082;378083 378082 2 VLDELTLAR Unmodified 1028.5866 0.58660996 56;70;84;76;68 CON__P02533;P02533;CON__P08779;P08779;CON__P19012;P19012;CON__Q04695;Q04695;CON__P08727;P08727 KRT14;KRT16;KRT15;KRT17;KRT19 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16;Keratin, type I cytoskeletal 15;Keratin, type I cytoskeletal 17;Keratin, type I cytoskeletal 19 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 30 5 2 3 2 3 2 2 2 2 3 2 2 66.885 66.92 1;2 2.6237E-14 76097 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 170.66 102.24 + 13310000000 0 0 0 2253400000 635100000 692980000 800740000 1436900000 420040000 1061900000 892930000 1058300000 2861300000 625500000 570630000 56570 56;70;76;84;68 50844 476399;476400;476401;476402;476403;476404;476405;476406;476407;476408;476409;476410;476411;476412;476413;476414;476415;476416;476417;476418;476419;476420;476421;476422;476423;476424;476425;476426;476427;476428 378084;378085;378086;378087;378088;378089;378090;378091;378092;378093;378094;378095;378096;378097;378098;378099;378100;378101;378102;378103;378104;378105;378106;378107;378108;378109;378110;378111;378112;378113;378114;378115;378116;378117;378118;378119 378096 35 VLDELTLSK Unmodified 1016.5754 0.57537657 73;981;57 CON__P02535-1;CON__P13646-1;P13646;CON__ENSEMBL:ENSP00000377550 KRT13 Keratin, type I cytoskeletal 13 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 60.127 60.173 2 0.0037946 68428 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 111.95 58.393 + 992410000 0 0 0 13558000 13461000 0 280660000 467500000 0 0 11308000 77592000 122190000 6141000 0 56571 57;73;981 50845 476429;476430;476431;476432;476433;476434;476435;476436 378120;378121;378122;378123;378124 378120 2 VLDELTLTK Unmodified 1030.591 0.59102664 72 CON__P13645;P13645 KRT10 Keratin, type I cytoskeletal 10 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.57 1.8 4 71 1 2 1 14 4 6 4 5 4 7 5 6 6 6 4 69.351 69.299 1;2 0.0025264 71572 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 138.54 81.264 + 120990000000 6137100 48637000 2546500 22497000000 7573100000 8477700000 7222800000 11680000000 6181100000 10576000000 9288800000 14758000000 11669000000 6581400000 4424900000 56572 72 50846 476437;476438;476439;476440;476441;476442;476443;476444;476445;476446;476447;476448;476449;476450;476451;476452;476453;476454;476455;476456;476457;476458;476459;476460;476461;476462;476463;476464;476465;476466;476467;476468;476469;476470;476471;476472;476473;476474;476475;476476;476477;476478;476479;476480;476481;476482;476483;476484;476485;476486;476487;476488;476489;476490;476491;476492;476493;476494;476495;476496;476497;476498;476499;476500;476501;476502;476503;476504;476505;476506;476507;476508;476509;476510;476511 378125;378126;378127;378128;378129;378130;378131;378132;378133;378134;378135;378136;378137;378138;378139;378140;378141;378142;378143;378144;378145;378146;378147;378148;378149;378150;378151;378152;378153;378154;378155;378156;378157;378158;378159;378160;378161;378162;378163;378164;378165;378166;378167;378168;378169;378170;378171;378172;378173;378174;378175;378176;378177;378178;378179;378180;378181;378182;378183;378184;378185;378186;378187;378188;378189;378190;378191;378192;378193;378194;378195;378196;378197;378198;378199;378200;378201;378202;378203;378204;378205;378206;378207;378208;378209;378210;378211;378212;378213;378214;378215;378216;378217;378218 378175 90 VLDFEHFLPMLQTVAK Unmodified 1886.9964 0.99644153 1813 P60660 MYL6 Myosin light polypeptide 6 yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 100.29 96.036 3 0.00032074 114785 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 67.605 56.818 32939000 0 32939000 0 0 0 0 0 0 0 0 0 0 0 0 0 56573 1813 50847 476512;476513;476514 378219;378220 378220 2 VLDFEHFLPMLQTVAK Oxidation (M) 1902.9914 0.99135615 1813 P60660 MYL6 Myosin light polypeptide 6 yes yes 0 1 0 By MS/MS 3 0 1 1 96.915 93.638 3 0.0019107 112192 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 52.522 36.029 14928000 0 14928000 0 0 0 0 0 0 0 0 0 0 0 0 0 56574 1813 50847 476515 378221 378221 2937 1 VLDHAMEAERLVEK Unmodified 1638.8399 0.83994089 241 O15020 SPTBN2 Spectrin beta chain, non-erythrocytic 2 yes yes 0 0 1 By MS/MS 2 0 1 1 65.065 56.776 3 0.022144 76359 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 29.013 18.283 6200200 6200200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56575 241 50848 476516 378222 378222 1 VLDHAMIGPEGTDNCHK Unmodified 1892.8509 0.85091628 3600 Q8WYA6 CTNNBL1 Beta-catenin-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 44.847 40.262 3 0.011183 53652 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 33.893 27.165 16643000 0 11575000 5067800 0 0 0 0 0 0 0 0 0 0 0 0 56576 3600 50849 476517;476518 378223;378224 378223 1 VLDHAMIGPEGTDNCHK Oxidation (M) 1908.8458 0.8458309 3600 Q8WYA6 CTNNBL1 Beta-catenin-like protein 1 yes yes 0 1 0 By MS/MS 2 0 1 1 37.764 31.266 3 1.9586E-06 43636 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.173 60.765 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56577 3600 50849 476519 378225 378225 5097 1 VLDIIATINK Unmodified 1098.6649 0.66486028 845 P07686 HEXB Beta-hexosaminidase subunit beta;Beta-hexosaminidase subunit beta chain B;Beta-hexosaminidase subunit beta chain A yes yes 0 0 0 By MS/MS By matching By MS/MS 2 0 3 1 1 1 84.724 79.612 2 0.0060523 101473 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.998 38.663 30846000 21918000 6925100 2003000 0 0 0 0 0 0 0 0 0 0 0 0 56578 845 50850 476520;476521;476522 378226;378227 378226 2 VLDIPGQDSETVFDIQNDR Unmodified 2160.0335 0.033491558 2604 Q16513 PKN2 Serine/threonine-protein kinase N2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 84.34 84.41 3 0.0023925 97749 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 36.997 32.287 15812000 0 0 0 0 0 8332300 0 0 0 7479800 0 0 0 0 0 56579 2604 50851 476523;476524 378228;378229 378228 2 VLDLDLFR Unmodified 989.55458 0.55458155 1580 P49591 SARS Serine--tRNA ligase, cytoplasmic yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 86.87 87.041 2 0.043878 100582 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.097 22.713 14597000 0 0 0 0 0 0 0 0 1025800 0 2046100 2069900 0 0 9454800 56580 1580 50852 476525;476526;476527;476528 378230 378230 1 VLDLDLFRVDK Unmodified 1331.7449 0.74490152 1580 P49591 SARS Serine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS 6 4 2 2 1 1 1 1 88.161 84.955 2;3 0.0012276 108579 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.254 66.876 77239000 24054000 45224000 0 0 0 1586600 0 0 0 0 0 0 0 0 6374200 56581 1580 50853 476529;476530;476531;476532 378231;378232;378233 378233 2 VLDLELK Unmodified 828.49567 0.49566969 773 P04083 ANXA1 Annexin A1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 71.771 66.239 2 0.029674 85138 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.407 5.6729 3781400000 347940000 3312900000 120590000 0 0 0 0 0 0 0 0 0 0 0 0 56582 773 50854 476533;476534;476535;476536 378234;378235 378234 2 VLDLLDPASGDLVIR Unmodified 1594.893 0.89302232 2449 Q14807 KIF22 Kinesin-like protein KIF22 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 92.332 92.454 2 0.0002624 107168 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.342 62.712 4446200 0 0 0 0 0 0 0 0 0 0 0 0 0 1091300 3355000 56583 2449 50855 476537;476538 378236 378236 1 VLDLQQIK Unmodified 955.57023 0.57023162 5036 Q9UNM6 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.7 58.814 2 0.010561 67060 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 121.29 65.851 714170000 0 0 0 45193000 46707000 67726000 22198000 21476000 18836000 93821000 124160000 167780000 22833000 25579000 57858000 56584 5036 50856 476539;476540;476541;476542;476543;476544;476545;476546;476547;476548;476549;476550 378237;378238;378239;378240;378241;378242;378243;378244 378238 2 VLDMENSFK Unmodified 1081.5114 0.51139611 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 63.154 56.077 2 0.014053 71909 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.426 63.695 44656000 1863900 42792000 0 0 0 0 0 0 0 0 0 0 0 0 0 56585 5049 50857 476551;476552 378245;378246 378246 2 VLDNAIETEK Unmodified 1130.5819 0.58191851 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.18 3.29 3 1 13 1 2 1 2 1 1 1 1 1 1 2 1 1 1 36.381 35.391 2 1.1707E-05 44466 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 133.13 89.017 956310000 19317000 710990000 2496000 0 13465000 23275000 15554000 9765700 8220000 20085000 26211000 29733000 19137000 15321000 42739000 56586 2047 50858 476553;476554;476555;476556;476557;476558;476559;476560;476561;476562;476563;476564;476565;476566;476567;476568;476569 378247;378248;378249;378250;378251;378252;378253;378254;378255;378256;378257;378258 378250 11 VLDNYLTSPLPEEVDETSAEDEGVSQR Unmodified 2991.3833 0.38328487 140 O00299 CLIC1 Chloride intracellular channel protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 83.433 83.61 3 3.1641E-127 96472 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 164.39 157.74 53722000 0 0 0 0 0 0 0 0 0 0 9810800 10755000 0 0 33156000 56587 140 50859 476570;476571;476572 378259;378260;378261;378262 378259 4 VLDNYLTSPLPEEVDETSAEDEGVSQRK Unmodified 3119.4782 0.47824789 140 O00299 CLIC1 Chloride intracellular channel protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.5 3.61 12 2 6 7 4 3 1 1 1 1 1 1 81.982 78.785 3;4 1.0914E-162 98685 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 175.59 173.18 1976900000 549850000 940700000 274270000 0 3856400 0 0 5996500 0 0 28063000 30709000 0 13815000 129690000 56588 140 50860 476573;476574;476575;476576;476577;476578;476579;476580;476581;476582;476583;476584;476585;476586;476587;476588;476589;476590;476591;476592 378263;378264;378265;378266;378267;378268;378269;378270;378271;378272;378273;378274;378275;378276;378277;378278;378279 378263 17 VLDPASSDFTR Unmodified 1206.5881 0.58806652 2739 Q5JTH9 RRP12 RRP12-like protein yes yes 0 0 0 By MS/MS 10 0 1 1 52.342 51.812 2 0.020343 59019 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 42.743 18.588 9120500 0 0 0 0 9120500 0 0 0 0 0 0 0 0 0 0 56589 2739 50861 476593 378280 378280 1 VLDPEVTQQTIELK Unmodified 1611.872 0.87195253 3270 Q8IY31 IFT20 Intraflagellar transport protein 20 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 74.205 74.318 2 0.0033586 85167 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.473 48.207 39769000 0 0 0 0 3976600 2021400 0 3336100 2852400 4876000 4525000 4401100 4688700 3801800 5290300 56590 3270 50862 476594;476595;476596;476597;476598;476599;476600;476601;476602;476603 378281;378282;378283;378284;378285;378286;378287;378288 378282 5 VLDPFTIK Unmodified 931.53787 0.53786886 1249 P29401 TKT Transketolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.725 76.785 2 0.0081134 87846 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.323 0 2748800000 0 0 0 35176000 17820000 33064000 33972000 38122000 24518000 39069000 429260000 397320000 36855000 310440000 1353200000 56591 1249 50863 476604;476605;476606;476607;476608;476609;476610;476611;476612;476613;476614;476615 378289;378290;378291;378292;378293;378294;378295;378296;378297 378291 9 VLDPFTIKPLDR Unmodified 1412.8028 0.80275075 1249 P29401 TKT Transketolase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 80.954 81.113 3 0.0040161 93440 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.555 43.81 26414000 0 0 0 0 0 0 0 0 0 0 0 6733700 0 3180100 16500000 56592 1249 50864 476616;476617;476618 378298;378299 378298 2 VLDSFCEGLK Unmodified 1166.5642 0.56415996 89 CON__Q3SX09 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 62.178 62.233 2 0.016645 70213 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 49.418 27.181 + 66692000 0 0 0 3560400 3278800 4788900 4463000 3976100 3187500 6506900 7749600 10057000 11307000 7817500 0 56593 89 50865 476619;476620;476621;476622;476623;476624;476625;476626;476627;476628;476629 378300;378301;378302;378303 378302 4 VLDSGAPIK Unmodified 898.51238 0.51238239 823 P06576 ATP5B ATP synthase subunit beta, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 38.004 32.266 2 0.023838 42333 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.523 35.809 188210000 9156200 179060000 0 0 0 0 0 0 0 0 0 0 0 0 0 56594 823 50866 476630;476631 378304 378304 0 VLDTKWTLLQEQGTK Unmodified 1758.9516 0.95159983 74;66;779 P04259;CON__P13647;P13647;CON__P04259 KRT6B;KRT5 Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 5 no no 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 73.285 73.377 3 1.3834E-07 84444 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 89.911 86.007 + 132710000 0 0 0 6845900 0 0 7742300 13141000 5274100 0 12273000 48600000 23591000 15242000 0 56595 779;74;66 50867 476632;476633;476634;476635;476636;476637;476638;476639 378305;378306;378307;378308;378309;378310 378309 5 VLDTNDR Unmodified 831.40865 0.4086456 953;2971 P11586;Q6UB35 MTHFD1;MTHFD1L C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed;Monofunctional C1-tetrahydrofolate synthase, mitochondrial no no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 9.8383 9.9494 2 0.040879 7654 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.398 25.924 88777000 0 0 0 6743100 5444600 9066600 10599000 9098700 5899700 5761300 0 8692800 7234200 6885100 13352000 56596 953;2971 50868 476640;476641;476642;476643;476644;476645;476646;476647;476648;476649;476650 378311 378311 1 VLDTNDRFLR Unmodified 1247.6622 0.66223452 953;2971 P11586;Q6UB35 MTHFD1;MTHFD1L C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed;Monofunctional C1-tetrahydrofolate synthase, mitochondrial no no 0 0 1 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.116 48.278 3 0.0032327 53121 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.908 42.696 124470000 0 0 0 7460700 6074900 9278500 9307000 8137900 8394200 12049000 11431000 14293000 10536000 11085000 16425000 56597 953;2971 50869 476651;476652;476653;476654;476655;476656;476657;476658;476659;476660;476661;476662 378312;378313;378314;378315;378316;378317 378314 6 VLDTSSLTQSAPASPTNK Unmodified 1815.9214 0.92142191 3304 Q8N122 RPTOR Regulatory-associated protein of mTOR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 55.865 55.792 2 1.257E-05 63528 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 94.191 81.211 24731000 0 0 0 2705600 2551900 5286700 3160300 3960400 2203100 0 0 0 0 4863500 0 56598 3304 50870 476663;476664;476665;476666;476667;476668;476669;476670 378318;378319;378320;378321;378322;378323;378324;378325 378318 8 VLDVSDLESVTSK Unmodified 1390.7191 0.71914028 3512 Q8TE77 SSH3 Protein phosphatase Slingshot homolog 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 76.912 76.384 2 6.226E-21 93725 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 159.94 135.09 303020000 0 248830000 0 3262700 2575800 4903300 4085600 3780200 2519100 4971100 7041400 6329100 3015100 4166700 7535200 56599 3512 50871 476671;476672;476673;476674;476675;476676;476677;476678;476679;476680;476681;476682;476683;476684 378326;378327;378328;378329;378330;378331;378332;378333;378334;378335;378336;378337;378338 378329 13 VLDVSNSFAVPFDEDDK Unmodified 1895.8789 0.8788884 1668 P51665 PSMD7 26S proteasome non-ATPase regulatory subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.12 3.72 2 1 5 1 2 1 1 1 1 1 86.271 84.329 2 7.4696E-26 104482 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 155.17 139.55 119860000 7129500 72592000 0 0 0 11020000 0 0 0 6484900 7446800 6589100 0 0 8599500 56600 1668 50872 476685;476686;476687;476688;476689;476690;476691;476692 378339;378340;378341;378342;378343;378344;378345 378341 7 VLEAAAQAAR Unmodified 998.55089 0.55089316 4546 Q9NPD3 EXOSC4 Exosome complex component RRP41 yes yes 0 0 0 By MS/MS 10 0 1 1 25.786 26.46 2 0.012279 27270 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.038 24.19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56601 4546 50873 476693 378346 378346 1 VLEAAVAAK Unmodified 870.51747 0.51746776 2395 Q14232 EIF2B1 Translation initiation factor eIF-2B subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 13 2 2 1 1 1 1 1 2 2 29.972 30.138 2 0.0096665 32764 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 66.073 21.381 138590000 0 0 0 9179700 9855300 13615000 8714400 0 6178500 12015000 10604000 22838000 0 0 45586000 56602 2395 50874 476694;476695;476696;476697;476698;476699;476700;476701;476702;476703;476704;476705;476706 378347;378348;378349 378348 2 VLEACSIACNK Unmodified 1263.5951 0.59514251 1335 P34896 SHMT1 Serine hydroxymethyltransferase, cytosolic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 43.525 38.411 2 2.7798E-06 48074 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 141.48 102.69 507120000 9232600 495570000 2313500 0 0 0 0 0 0 0 0 0 0 0 0 56603 1335 50875 476707;476708;476709;476710 378350;378351;378352;378353 378351 4 VLEALELYNK Unmodified 1190.6547 0.65468953 554 O75886 STAM2 Signal transducing adapter molecule 2 yes yes 0 0 0 By MS/MS By matching By MS/MS 2 0 4 2 1 1 80.429 75.252 2 0.019639 95619 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.948 57.013 57984000 6146400 44814000 7023700 0 0 0 0 0 0 0 0 0 0 0 0 56604 554 50876 476711;476712;476713;476714 378354;378355 378354 2 VLEALLPLK Unmodified 994.64267 0.64266828 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 83.596 83.66 2 0.0037643 96866 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 96.253 78.96 1333600000 0 0 0 29868000 32619000 130320000 77441000 72063000 42806000 148340000 134840000 124470000 70494000 138140000 332190000 56605 1565 50877 476715;476716;476717;476718;476719;476720;476721;476722;476723;476724;476725;476726 378356;378357;378358;378359;378360;378361;378362;378363;378364;378365;378366;378367 378356 12 VLEALQVLR Unmodified 1039.639 0.63897988 4434 Q9H7D7 WDR26 WD repeat-containing protein 26 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.059 79.107 2 0.0036746 91368 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 89.296 54.488 81540000 0 0 0 2365700 3814800 7603100 5196600 0 4338800 8548700 8018400 9113600 7347700 8140900 17051000 56606 4434 50878 476727;476728;476729;476730;476731;476732;476733;476734;476735;476736;476737 378368;378369;378370;378371;378372;378373;378374;378375;378376;378377;378378 378369 11 VLEAMTER Unmodified 947.47462 0.47461667 417 O60610 DIAPH1 Protein diaphanous homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 33.041 33.157 2 0.0048728 35610 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 109.01 46.295 185960000 0 0 0 16807000 15688000 21172000 17819000 14085000 11863000 17658000 26289000 25458000 0 19125000 0 56607 417 50879 476738;476739;476740;476741;476742;476743;476744;476745;476746;476747 378379;378380;378381;378382;378383;378384;378385;378386;378387;378388;378389 378386 11 VLEAMTER Oxidation (M) 963.46953 0.46953129 417 O60610 DIAPH1 Protein diaphanous homolog 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 15.659 15.862 2 0.011658 15503 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 65.246 27.113 132900000 0 0 0 9630400 0 9833100 8373500 7955300 6022800 11220000 17404000 17281000 15272000 12171000 17733000 56608 417 50879 476748;476749;476750;476751;476752;476753;476754;476755;476756;476757;476758 378390;378391;378392 378391 528 2 VLEAVSANPGR Unmodified 1111.5986 0.59857163 4727 Q9NXH9 TRMT1 tRNA (guanine(26)-N(2))-dimethyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 35.109 35.414 2 6.2682E-05 38501 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 113.71 82.477 85849000 0 0 0 0 3352900 0 0 4205500 0 7567000 10635000 13456000 8996500 14130000 23507000 56609 4727 50880 476759;476760;476761;476762;476763;476764;476765;476766;476767;476768;476769 378393;378394;378395;378396;378397;378398;378399;378400;378401;378402;378403 378397 10 VLECDIIK Unmodified 988.52632 0.52631789 4209 Q9BWF3;Q9BQ04 RBM4;RBM4B RNA-binding protein 4;RNA-binding protein 4B yes no 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 55.849 50.989 2 0.02908 65826 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.058 35.556 48446000 0 47182000 1264700 0 0 0 0 0 0 0 0 0 0 0 0 56610 4209 50881 476770;476771 378404 378404 1 VLEDPAIASDESFGAVK Unmodified 1746.8676 0.86759543 667 O95544 NADK NAD kinase yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 75.015 75.051 2 0.00023741 86540 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 84.718 68.464 22992000 0 0 0 4069900 0 0 3307300 3494000 2823600 0 0 0 4098400 5199100 0 56611 667 50882 476772;476773;476774;476775;476776;476777 378405;378406;378407;378408;378409 378406 5 VLEDSDLK Unmodified 917.47058 0.47057715 932 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.47 3.07 2 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28.255 27.575 2 0.018722 30087 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 64.207 18.192 7608200000 8429600 4333500000 24891000 245380000 179810000 221640000 188080000 207860000 154850000 261660000 357170000 409530000 302070000 253380000 459940000 56612 932 50883 476778;476779;476780;476781;476782;476783;476784;476785;476786;476787;476788;476789;476790;476791;476792 378410;378411;378412;378413;378414;378415;378416;378417;378418;378419 378416 10 VLEDSDLKK Unmodified 1045.5655 0.56554017 932 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 23.175 19.181 2 0.040166 25533 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.161 39.826 124720000 0 124720000 0 0 0 0 0 0 0 0 0 0 0 0 0 56613 932 50884 476793;476794 378420 378420 1 VLEDTLSELAEGSERPGPK Unmodified 2026.0219 0.021864239 5286 Q9Y6J0 CABIN1 Calcineurin-binding protein cabin-1 yes yes 0 0 1 By MS/MS 2 0 1 1 79.271 76.697 3 0.000174 93180 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 60.317 52.605 3698000 0 0 3698000 0 0 0 0 0 0 0 0 0 0 0 0 56614 5286 50885 476795 378421;378422 378422 2 VLEDVTGEEFVLFMK Unmodified 1754.8801 0.88007437 4278 Q9BZZ5 API5 Apoptosis inhibitor 5 yes yes 0 0 0 By MS/MS 3 0 1 1 97.059 93.547 2 2.9146E-10 96847 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 110.86 93.421 4635700 4635700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56615 4278 50886 476796 378423 378423 1 VLEDVTGEEFVLFMK Oxidation (M) 1770.875 0.87498899 4278 Q9BZZ5 API5 Apoptosis inhibitor 5 yes yes 0 1 0 By MS/MS 2 0 1 1 93.77 85.64 2 0.0012617 110872 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.563 44.959 36894000 36894000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56616 4278 50886 476797 378424 378424 5736 1 VLEEANQAINPK Unmodified 1324.6987 0.69867961 3670 Q92841 DDX17 Probable ATP-dependent RNA helicase DDX17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 4 2 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 41.381 39.892 2 3.6354E-22 50678 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 195.17 153.72 1413300000 16804000 494510000 0 53724000 54131000 60766000 67680000 57415000 44797000 89768000 82594000 91809000 109010000 82179000 108160000 56617 3670 50887 476798;476799;476800;476801;476802;476803;476804;476805;476806;476807;476808;476809;476810;476811;476812;476813;476814;476815 378425;378426;378427;378428;378429;378430;378431;378432;378433;378434;378435;378436;378437;378438;378439;378440;378441 378430 17 VLEEDESIR Unmodified 1088.535 0.53496832 329 O43432 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 32.562 33.003 2 0.013737 35502 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 59.35 35.128 16991000 0 0 0 0 0 0 0 0 0 3318500 0 13672000 0 0 0 56618 329 50888 476816;476817 378442;378443 378443 2 VLEEEEQR Unmodified 1030.4931 0.49310351 2117 Q05682 CALD1 Caldesmon yes yes 0 0 0 By matching By matching By matching By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 14.517 14.673 2 0.029639 13162 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 56.014 35.494 65213000 0 0 0 0 8254900 0 6038000 0 4023900 0 18631000 0 12262000 16003000 0 56619 2117 50889 476818;476819;476820;476821;476822;476823 378444 378444 1 VLEEEQK Unmodified 873.44436 0.4443624 475 O75208 COQ9 Ubiquinone biosynthesis protein COQ9, mitochondrial yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching 10 0 6 2 1 1 1 1 8.4297 8.6508 2 0.030361 7589 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 105.39 34.478 14099000 0 0 0 0 0 357460 0 0 0 2304400 5596100 3919000 0 0 1922100 56620 475 50890 476824;476825;476826;476827;476828;476829 378445;378446 378445 2 VLEEGGFFEEK Unmodified 1282.6081 0.60813326 4585 Q9NR12 PDLIM7 PDZ and LIM domain protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 67.636 66.317 2 6.6236E-05 75129 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 132.01 97.758 232370000 19901000 111520000 5857200 2965100 3423200 9380900 6047900 4647900 5016100 11692000 10070000 10943000 5686400 6869500 18355000 56621 4585 50891 476830;476831;476832;476833;476834;476835;476836;476837;476838;476839;476840;476841;476842;476843;476844;476845 378447;378448;378449;378450;378451;378452;378453;378454;378455;378456;378457;378458;378459;378460;378461;378462 378458 13 VLEEGSVEAR Unmodified 1087.551 0.55095274 3784 Q96CT7 CCDC124 Coiled-coil domain-containing protein 124 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 27.203 27.496 2 0.0067125 28530 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.649 56.09 31322000 0 0 0 0 0 0 0 3621900 0 4057100 9944900 0 4783000 8915300 0 56622 3784 50892 476846;476847;476848;476849;476850;476851 378463;378464;378465;378466;378467 378464 5 VLEELEGVR Unmodified 1042.5659 0.56587452 1455 P42356 PI4KA Phosphatidylinositol 4-kinase alpha yes yes 0 0 0 By MS/MS 10 0 1 1 55.124 55.72 2 0.040291 62975 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 62.546 23.71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56623 1455 50893 476852 378468 378468 1 VLEENAQK Unmodified 929.48181 0.48181054 3891 Q96JC1 VPS39 Vam6/Vps39-like protein yes yes 0 0 0 By MS/MS 2 0 1 1 10.66 7.3948 2 0.012627 10362 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.139 51.024 16216000 0 16216000 0 0 0 0 0 0 0 0 0 0 0 0 0 56624 3891 50894 476853 378469 378469 1 VLEENHVEHQPR Unmodified 1485.7324 0.73243935 4401 Q9H4L5 OSBPL3 Oxysterol-binding protein-related protein 3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 14.858 14.991 3 0.032254 14557 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 30.023 24.744 53323000 0 0 0 8630400 0 7640600 8164100 0 3699000 0 0 8428800 8426900 8333500 0 56625 4401 50895 476854;476855;476856;476857;476858;476859;476860 378470 378470 1 VLEEQIGVHRK Unmodified 1306.7357 0.73573382 202 O14686 KMT2D Histone-lysine N-methyltransferase 2D yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 27.732 27.338 3 0.0038267 28357 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 38.58 20.914 90025000 22216000 0 0 2051200 0 0 4423200 7251500 4779900 9939700 6485000 14925000 0 4908000 13046000 56626 202 50896 476861;476862;476863;476864;476865;476866;476867;476868;476869;476870 378471;378472;378473;378474;378475;378476 378476 5 VLEEQINEGEQQLK Unmodified 1655.8366 0.83662965 628 O95219 SNX4 Sorting nexin-4 yes yes 0 0 0 By MS/MS 2 0 1 1 60.647 54.789 2 4.4943E-24 70363 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 169.21 153.07 23594000 0 23594000 0 0 0 0 0 0 0 0 0 0 0 0 0 56627 628 50897 476871 378477;378478;378479 378478 3 VLEESSIENQDVSQERPHSNGELQDSGPLAQQLAGK Unmodified 3888.8726 0.87258083 2867 Q6BDS2 UHRF1BP1 UHRF1-binding protein 1 yes yes 0 0 1 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 71.532 71.78 4 1.3587E-10 82116 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.763 36.236 30137000 0 0 0 0 0 0 0 0 4179500 9244800 0 5015600 0 0 11697000 56628 2867 50898 476872;476873;476874;476875 378480 378480 1 VLEEVDWLITK Unmodified 1343.7337 0.73366813 4669 Q9NVI1 FANCI Fanconi anemia group I protein yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 88.527 87.576 2 0.00063867 101207 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.655 48.846 26130000 0 14740000 1469300 0 0 2204900 0 1679500 0 0 1567000 0 0 1735700 2732900 56629 4669 50899 476876;476877;476878;476879;476880;476881;476882 378481;378482;378483 378483 3 VLEGHTDFINGLVFDPK Unmodified 1899.9731 0.97306355 3447 Q8NFH4 NUP37 Nucleoporin Nup37 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 91.754 85.234 3 0.00023331 108035 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.716 55.058 28668000 10043000 18626000 0 0 0 0 0 0 0 0 0 0 0 0 0 56630 3447 50900 476883;476884 378484;378485 378484 2 VLEGMEVVR Unmodified 1030.5481 0.54811597 1153 P23284 PPIB Peptidyl-prolyl cis-trans isomerase B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 55.483 55.368 2 0.0051747 61726 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 81.296 46.489 25219000 0 0 0 2762500 3462800 0 0 4412100 0 0 0 0 4129100 10453000 0 56631 1153 50901 476885;476886;476887;476888;476889 378486;378487;378488 378487 3 VLEGMEVVR Oxidation (M) 1046.543 0.54303059 1153 P23284 PPIB Peptidyl-prolyl cis-trans isomerase B yes yes 0 1 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.152 34.335 2 0.026756 36535 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 44.349 30.192 129210000 0 0 0 4667900 5833400 4076900 6851100 5647000 6210400 5461900 18148000 26836000 9045500 10964000 25468000 56632 1153 50901 476890;476891;476892;476893;476894;476895;476896;476897;476898;476899;476900;476901 378489;378490 378489 1663 2 VLEGMEVVRK Unmodified 1158.6431 0.64307898 1153 P23284 PPIB Peptidyl-prolyl cis-trans isomerase B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.59 3.61 7 2 20 2 4 3 2 2 2 1 1 2 2 2 2 2 2 45.493 43.874 2;3 0.00017594 55687 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 124.23 67.571 5487100000 2856000000 803880000 610230000 80900000 35992000 0 51264000 14300000 96168000 16898000 194660000 144470000 79716000 112370000 390260000 56633 1153 50902 476902;476903;476904;476905;476906;476907;476908;476909;476910;476911;476912;476913;476914;476915;476916;476917;476918;476919;476920;476921;476922;476923;476924;476925;476926;476927;476928;476929;476930 378491;378492;378493;378494;378495;378496;378497;378498;378499;378500;378501;378502;378503;378504;378505;378506;378507;378508;378509;378510;378511;378512;378513;378514;378515;378516;378517;378518;378519;378520;378521 378514 24 VLEGMEVVRK Oxidation (M) 1174.638 0.63799361 1153 P23284 PPIB Peptidyl-prolyl cis-trans isomerase B yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 6.14 3.88 8 3 11 5 4 2 1 1 1 1 1 1 1 1 1 1 1 26.602 24.626 2;3 0.000897 34666 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.57 71.15 3419300000 1280600000 919090000 994070000 15666000 12192000 12052000 19429000 10059000 0 13601000 23016000 37740000 9550500 18921000 53273000 56634 1153 50902 476931;476932;476933;476934;476935;476936;476937;476938;476939;476940;476941;476942;476943;476944;476945;476946;476947;476948;476949;476950;476951;476952 378522;378523;378524;378525;378526;378527;378528;378529;378530;378531;378532;378533;378534 378531 1663 9 VLEGSELELAK Unmodified 1186.6445 0.64451877 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.18 3.74 3 1 7 1 2 1 1 1 1 1 1 1 1 60.979 59.02 2 0.00061345 67580 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 79.489 35.094 393840000 11265000 301690000 3723700 6550000 0 0 0 10981000 0 11511000 0 9642600 10687000 10481000 17309000 56635 2459 50903 476953;476954;476955;476956;476957;476958;476959;476960;476961;476962;476963 378535;378536;378537;378538;378539;378540;378541 378539 6 VLEHQLLQTTK Unmodified 1308.7402 0.74015049 185 O14530 TXNDC9 Thioredoxin domain-containing protein 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.18 3.82 6 11 2 1 3 1 1 1 1 1 2 1 1 1 1 42.821 40.96 2;3 2.7011E-24 58399 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 206.97 153.48 1011700000 623930000 81089000 206070000 0 0 6317900 8539200 6268400 4502200 9690000 11274000 14688000 9111700 12915000 17300000 56636 185 50904 476964;476965;476966;476967;476968;476969;476970;476971;476972;476973;476974;476975;476976;476977;476978;476979;476980 378542;378543;378544;378545;378546;378547;378548;378549;378550;378551;378552;378553 378545 11 VLEILGK Unmodified 770.49019 0.49019038 1481 P43490 NAMPT Nicotinamide phosphoribosyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59.974 58.867 2 0.031352 76168 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.673 10.22 1232100000 190460000 741490000 88388000 14037000 7348400 11953000 13188000 11571000 8588100 16247000 26128000 28775000 14057000 15881000 43981000 56637 1481 50905 476981;476982;476983;476984;476985;476986;476987;476988;476989;476990;476991;476992;476993;476994;476995 378554;378555;378556 378554 3 VLEIPYK Unmodified 860.50076 0.50075507 1251;1545 P29508;P48594 SERPINB3;SERPINB4 Serpin B3;Serpin B4 no no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60.857 60.258 2 0.032282 70045 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 73.039 54.354 1542000000 0 59625000 2199200 812920000 57112000 48807000 52087000 57769000 30694000 88358000 83206000 95906000 55173000 45637000 52461000 56638 1251;1545 50906 476996;476997;476998;476999;477000;477001;477002;477003;477004;477005;477006;477007;477008;477009 378557;378558 378558 2 VLEITELPDGITR Unmodified 1454.7981 0.7980593 2482 Q15032 R3HDM1 R3H domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 82.802 82.851 2 0.00075647 95933 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 70.977 48.291 59865000 0 0 0 2661600 3605400 5239400 3395300 4866300 0 6010700 6965200 8799300 0 6954200 11367000 56639 2482 50907 477010;477011;477012;477013;477014;477015;477016;477017;477018;477019 378559;378560;378561 378561 3 VLELDNVK Unmodified 928.52295 0.52294707 1271 P30153 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 49.985 48.565 2 0.0050168 53580 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 108.46 40.48 5236900000 99818000 3925600000 0 63766000 67772000 115710000 66041000 54001000 53388000 122770000 142380000 125600000 85300000 94211000 220570000 56640 1271 50908 477020;477021;477022;477023;477024;477025;477026;477027;477028;477029;477030;477031;477032;477033;477034;477035 378562;378563;378564;378565;378566;378567;378568;378569;378570;378571;378572;378573;378574;378575;378576;378577;378578 378573 15 VLELDPALAPVVSR Unmodified 1477.8504 0.85042922 123 O00170 AIP AH receptor-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 85.111 85.178 2 1.2789E-07 98633 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 105.32 65.614 158400000 0 0 0 6247600 7036100 17037000 12595000 12894000 6345100 15598000 18016000 17056000 9715400 11460000 24400000 56641 123 50909 477036;477037;477038;477039;477040;477041;477042;477043;477044;477045;477046;477047 378579;378580;378581;378582;378583;378584;378585;378586;378587;378588;378589;378590;378591 378579 13 VLELDSVK Unmodified 901.51205 0.51204804 1272 P30154 PPP2R1B Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 3 9 1 1 1 1 1 1 1 1 1 1 1 1 51.213 49.844 2 0.012232 56547 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 75.109 53.809 463320000 12964000 328470000 5593100 7161400 6539500 0 8423600 0 0 16102000 15560000 17398000 13499000 10614000 20993000 56642 1272 50910 477048;477049;477050;477051;477052;477053;477054;477055;477056;477057;477058;477059 378592;378593;378594;378595;378596;378597;378598;378599;378600;378601;378602 378594 11 VLELEDELQESR Unmodified 1458.7202 0.72020291 2155 Q08378 GOLGA3 Golgin subfamily A member 3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 71.053 71.19 2 0.0014153 81255 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.069 50.205 41034000 0 0 0 0 2389300 4911300 2090900 2315100 2815900 4844400 4519500 7445600 0 3112500 6589000 56643 2155 50911 477060;477061;477062;477063;477064;477065;477066;477067;477068;477069 378603;378604;378605;378606;378607;378608;378609 378605 7 VLELEDELQESRGFRK Unmodified 1947.0062 0.0061545955 2155 Q08378 GOLGA3 Golgin subfamily A member 3 yes yes 0 0 2 By MS/MS 2 0 1 1 77.841 69.71 4 0.02736 91759 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 30.332 12.786 6612600 6612600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56644 2155 50912 477070 378610 378610 1 VLELEGEK Unmodified 915.49131 0.49131259 1838 P61201 COPS2 COP9 signalosome complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.3 2.1 1 9 1 1 1 1 1 1 1 1 1 1 36.963 36.791 2 0.0082561 39322 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.833 33.279 421410000 0 29003000 0 0 0 34944000 29574000 23357000 0 44989000 43638000 43973000 47452000 49214000 75261000 56645 1838 50913 477071;477072;477073;477074;477075;477076;477077;477078;477079;477080 378611;378612;378613;378614;378615;378616;378617;378618 378613 8 VLELEPNNFEATNELRK Unmodified 2015.0324 0.032369346 4425 Q9H6T3 RPAP3 RNA polymerase II-associated protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.443 74.559 3 6.8486E-05 85101 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 66.965 63.524 201540000 0 0 0 0 7649700 13725000 12032000 11715000 11864000 23782000 21045000 21235000 14959000 24508000 39026000 56646 4425 50914 477081;477082;477083;477084;477085;477086;477087;477088;477089;477090;477091;477092 378619;378620;378621;378622;378623;378624;378625;378626;378627;378628;378629;378630;378631 378627 13 VLELLLPIR Unmodified 1064.6958 0.69576648 2753 Q5R3I4 TTC38 Tetratricopeptide repeat protein 38 yes yes 0 0 0 By MS/MS 10 0 1 1 92.245 92.383 2 0.0093345 107017 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.032 57.444 2691400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2691400 56647 2753 50915 477093 378632 378632 1 VLELMNK Unmodified 845.46807 0.46807473 3311 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.306 46.473 2 0.030808 52118 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 74.396 24.727 228070000 0 0 0 9435200 10288000 16894000 14227000 19368000 12142000 22055000 23706000 24214000 23440000 25491000 26805000 56648 3311 50916 477094;477095;477096;477097;477098;477099;477100;477101;477102;477103;477104;477105 378633;378634 378633 2 VLELMNK Oxidation (M) 861.46299 0.46298935 3311 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 35.617 35.988 2 0.035252 39485 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 58.246 7.7069 293380000 0 0 0 0 0 0 0 0 0 0 99856000 0 105820000 87708000 0 56649 3311 50916 477106;477107;477108 378635;378636;378637 378637 3 VLELNASDER Unmodified 1144.5724 0.57241646 1347 P35249 RFC4 Replication factor C subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.259 41.437 2 0.00022568 45091 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 133.57 59.446 681390000 0 0 0 40109000 38740000 48828000 53174000 43116000 34221000 71044000 77282000 90209000 74484000 40323000 69858000 56650 1347 50917 477109;477110;477111;477112;477113;477114;477115;477116;477117;477118;477119;477120 378638;378639;378640;378641;378642;378643;378644;378645;378646;378647;378648 378640 9 VLELNASDERGIQVVR Unmodified 1796.9745 0.97446054 1347 P35249 RFC4 Replication factor C subunit 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.072 68.153 3 0.0008086 78103 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 43.408 32.815 68694000 0 0 0 3321200 2676000 6226200 5039700 3505100 6348600 6046100 6940700 7980700 4174900 6005500 10429000 56651 1347 50918 477121;477122;477123;477124;477125;477126;477127;477128;477129;477130;477131;477132 378649;378650;378651;378652;378653;378654;378655;378656;378657;378658 378651 10 VLELQTELK Unmodified 1071.6176 0.61757574 3495 Q8TD16 BICD2 Protein bicaudal D homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 5.4 3.77 2 1 2 2 1 1 1 66.879 64.184 2 0.0065089 82017 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.44 51.754 95372000 0 87282000 1985600 0 0 0 0 0 0 0 0 0 1559800 0 4544900 56652 3495 50919 477133;477134;477135;477136;477137 378659;378660;378661 378659 3 VLELVLR Unmodified 840.54329 0.54328858 465 O75153;Q9Y5I4 CLUH;PCDHAC2 Clustered mitochondria protein homolog;Protocadherin alpha-C2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 74.579 74.629 2 0.023412 85979 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 86.512 5.9571 60882000 0 0 0 2781400 2287700 6818800 3467400 0 5063300 5322100 7080100 8348700 0 7597300 12116000 56653 465 50920 477138;477139;477140;477141;477142;477143;477144;477145;477146;477147 378662;378663;378664 378663 3 VLELVSITANK Unmodified 1185.6969 0.69688869 1336 P34897 SHMT2 Serine hydroxymethyltransferase, mitochondrial yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 75.861 75.903 2 0.002981 86988 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.662 50.408 31408000 0 0 0 894300 0 0 0 0 0 0 7562900 0 0 6192900 16758000 56654 1336 50921 477148;477149;477150;477151 378665;378666;378667 378665 3 VLELYEEAVDLALQVDVDLAK Unmodified 2344.2414 0.24135907 4805 Q9P253 VPS18 Vacuolar protein sorting-associated protein 18 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 104.84 100.33 3 1.227E-59 105541 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 110.41 102.84 18084000 13723000 3303700 1057400 0 0 0 0 0 0 0 0 0 0 0 0 56655 4805 50922 477152;477153;477154;477155;477156 378668;378669;378670;378671;378672;378673 378669 6 VLEMDPLPSSK Unmodified 1214.6217 0.62167484 3991 Q96SI9 STRBP Spermatid perinuclear RNA-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 65.05 65.131 2 0.012798 73648 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 47.187 37.599 30399000 0 0 0 1700800 1701900 1930300 2320200 2552300 0 2432700 4221700 3735700 2295600 3498800 4009300 56656 3991 50923 477157;477158;477159;477160;477161;477162;477163;477164;477165;477166;477167 378674;378675;378676;378677;378678;378679;378680 378679 7 VLEMEHTQQMK Unmodified 1372.6479 0.64790636 3824 Q96EV8 DTNBP1 Dysbindin yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 35.582 31.453 3 0.033425 39315 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 37.968 29.171 29833000 0 19319000 10514000 0 0 0 0 0 0 0 0 0 0 0 0 56657 3824 50924 477168;477169 378681 378681 1 VLENAEGAR Unmodified 957.48796 0.48795855 1399 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 14.856 14.358 2 0.0033037 14347 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 93.374 70.634 392640000 0 33788000 0 0 15693000 25408000 25588000 21185000 23139000 39193000 64483000 0 36266000 0 107900000 56658 1399 50925 477170;477171;477172;477173;477174;477175;477176;477177;477178;477179;477180;477181 378682;378683;378684;378685;378686;378687;378688;378689;378690;378691 378682 10 VLENIELNK Unmodified 1070.5972 0.59717465 5084 Q9Y262 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 52.961 52.272 2 0.0050719 60068 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 84.498 23.816 320390000 0 23351000 0 29144000 24815000 31427000 0 0 0 62654000 0 0 57024000 0 91971000 56659 5084 50926 477182;477183;477184;477185;477186;477187;477188;477189;477190 378692;378693;378694;378695;378696;378697;378698;378699 378699 5 VLEPEGSPSLCLLK Unmodified 1540.8171 0.81708018 4869 Q9UDY8 MALT1 Mucosa-associated lymphoid tissue lymphoma translocation protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By matching 7.44 3.62 2 1 6 2 1 1 1 1 1 1 1 80.959 79.891 2 6.4716E-24 99418 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.82 114.38 443450000 0 428160000 4449900 0 0 0 842140 0 1426800 0 2430800 2459100 1124700 2558500 0 56660 4869 50927 477191;477192;477193;477194;477195;477196;477197;477198;477199 378700;378701;378702;378703 378701 4 VLEPSGWR Unmodified 942.49232 0.49231565 3427 Q8NEM2 SHCBP1 SHC SH2 domain-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 47.86 48.11 2 0.013906 53039 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.342 53.977 80067000 0 0 0 0 3942900 0 4998900 4339500 3488000 9516500 12280000 9274300 9969300 8271300 13986000 56661 3427 50928 477200;477201;477202;477203;477204;477205;477206;477207;477208;477209 378704;378705;378706;378707;378708;378709;378710;378711 378705 8 VLEPYPSK Unmodified 931.50148 0.50148335 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.8 3.12 3 1 1 1 2 1 1 36.641 32.893 2 0.0025212 40713 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 121.99 88.251 1251900000 34944000 1143400000 17073000 0 0 0 0 0 0 0 0 0 0 0 56438000 56662 4819 50929 477210;477211;477212;477213;477214 378712;378713;378714;378715 378714 4 VLEQAEGK Unmodified 872.46035 0.46034682 4814 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 10.984 11.046 2 0.013245 10022 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 72.789 37.684 13216000 0 0 0 1846600 1043600 0 0 0 2943700 0 0 0 4010300 3372100 0 56663 4814 50930 477215;477216;477217;477218;477219 378716;378717;378718 378717 3 VLEQAEGKVEEPENPAAK Unmodified 1936.9742 0.97418577 4814 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 41.26 41.21 3 7.8913E-05 45692 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 62.658 54.795 90917000 0 0 0 11336000 15026000 8449800 0 16063000 0 13273000 0 0 26769000 0 0 56664 4814 50931 477220;477221;477222;477223;477224;477225 378719;378720;378721;378722;378723;378724;378725 378720 7 VLEQATQSLR Unmodified 1143.6248 0.62478638 3066 Q7RTS9 DYM Dymeclin yes yes 0 0 0 By MS/MS 10 0 1 1 39.375 39.408 2 0.0025569 44020 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 83.948 67.172 16399000 0 0 0 0 0 16399000 0 0 0 0 0 0 0 0 0 56665 3066 50932 477226 378726 378726 1 VLEQLEDLDSR Unmodified 1315.662 0.66195975 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.314 68.392 2 1.9596E-05 77617 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 127.76 55.218 196270000 0 0 0 11139000 12241000 15771000 11975000 11649000 11776000 17641000 19460000 20737000 12806000 15719000 35353000 56666 1201 50933 477227;477228;477229;477230;477231;477232;477233;477234;477235;477236;477237;477238 378727;378728;378729;378730;378731;378732;378733;378734;378735;378736;378737;378738;378739;378740 378732 14 VLEQLQR Unmodified 884.50797 0.50796571 948 P11441 UBL4A Ubiquitin-like protein 4A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.13 32.317 2 0.023018 35082 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 103.28 45.117 393210000 0 0 0 19089000 21053000 22591000 22788000 31784000 18161000 32212000 42372000 59079000 42066000 36576000 45437000 56667 948 50934 477239;477240;477241;477242;477243;477244;477245;477246;477247;477248;477249;477250 378741;378742;378743;378744;378745;378746;378747;378748;378749;378750 378744 8 VLEQLTGQTPVFSK Unmodified 1545.8403 0.84025847 1929 P62913 RPL11 60S ribosomal protein L11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.43 3.14 5 1 24 1 3 2 2 2 2 2 2 2 2 2 2 2 2 2 75.352 74.523 2;3 1.6404E-135 86638 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 245.94 204.86 2145900000 34066000 716090000 17685000 69328000 76724000 72544000 71375000 78932000 74560000 134610000 136870000 170630000 152340000 140900000 199290000 56668 1929 50935 477251;477252;477253;477254;477255;477256;477257;477258;477259;477260;477261;477262;477263;477264;477265;477266;477267;477268;477269;477270;477271;477272;477273;477274;477275;477276;477277;477278;477279;477280 378751;378752;378753;378754;378755;378756;378757;378758;378759;378760;378761;378762;378763;378764;378765;378766;378767;378768;378769;378770;378771;378772;378773 378768 21 VLEQVSAQLEECK Unmodified 1531.7552 0.75520821 3964 Q96R06 SPAG5 Sperm-associated antigen 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.006 60.183 2 3.8729E-25 67895 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 188.28 168.51 76587000 0 0 0 0 4091300 4530200 4891400 5280800 5168500 7995900 8403400 9617400 7904200 7264400 11440000 56669 3964 50936 477281;477282;477283;477284;477285;477286;477287;477288;477289;477290;477291;477292 378774;378775;378776;378777;378778;378779;378780;378781;378782;378783;378784;378785 378777 12 VLERHITLDK Unmodified 1222.7034 0.70337105 4591 Q9NR45 NANS Sialic acid synthase yes yes 0 0 1 By MS/MS 2 0 1 1 40.641 33.96 3 0.0095416 47096 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 119.39 88.201 98756000 98756000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56670 4591 50937 477293 378786 378786 0 VLERQPDNAK Unmodified 1168.62 0.62003536 3350 Q8N5M4 TTC9C Tetratricopeptide repeat protein 9C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.33 3.77 6 12 2 2 2 1 1 1 1 1 1 1 1 1 1 1 1 9.3694 8.4032 2;3 0.0018296 10582 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 129.85 95.976 467830000 36013000 102500000 158560000 13214000 8227100 8248000 12372000 6767000 10454000 12364000 39970000 16115000 15278000 10924000 16836000 56671 3350 50938 477294;477295;477296;477297;477298;477299;477300;477301;477302;477303;477304;477305;477306;477307;477308;477309;477310;477311 378787;378788;378789;378790;378791 378791 3 VLERVNAVK Unmodified 1026.6186 0.61857879 4987 Q9UL46 PSME2 Proteasome activator complex subunit 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 29.538 25.132 2 0.038144 35160 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 118.5 57.735 540490000 517350000 18591000 4549400 0 0 0 0 0 0 0 0 0 0 0 0 56672 4987 50939 477312;477313;477314 378792 378792 0 VLESPENK Unmodified 914.47091 0.4709115 3321 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 15.893 12.519 2 0.020932 16772 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.92 58.293 34119000 0 34119000 0 0 0 0 0 0 0 0 0 0 0 0 0 56673 3321 50940 477315 378793 378793 0 VLESSIR Unmodified 802.45487 0.45486751 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.057 24.261 2 0.04604 24580 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.087 12.533 148220000 0 0 0 7257200 3318300 14540000 2764800 5054000 2552300 17456000 17571000 19746000 20336000 16957000 20669000 56674 19 50941 477316;477317;477318;477319;477320;477321;477322;477323;477324;477325;477326;477327 378794 378794 1 VLESTMVCVDNSEYMR 2 Oxidation (M) 1963.8325 0.83254861 1752 P55036 PSMD4 26S proteasome non-ATPase regulatory subunit 4 yes yes 0 2 0 By matching By matching By MS/MS 10 0 3 1 1 1 52.834 52.735 2 7.4147E-06 59719 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 77.64 72.156 12988000 0 0 0 0 3060800 4740100 0 0 0 5186600 0 0 0 0 0 56675 1752 50942 477328;477329;477330 378795 378795 2854;2855 1 VLESTMVCVDNSEYMR Oxidation (M) 1947.8376 0.83763398 1752 P55036 PSMD4 26S proteasome non-ATPase regulatory subunit 4 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 63.315 63.541 2 5.1942E-15 72661 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 100.55 97.129 23808000 0 0 0 0 0 2365300 0 0 0 9318800 6634300 5489200 0 0 0 56676 1752 50942 477331;477332;477333;477334 378796;378797;378798;378799 378799 2854;2855 4 VLESTPAESSEGLDPK Unmodified 1657.8047 0.80466082 3520 Q8TEU7 RAPGEF6 Rap guanine nucleotide exchange factor 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 47.033 47.268 2 5.219E-20 52772 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 110.86 104.75 102050000 0 0 0 0 7242900 8310800 10430000 7135000 5074600 11348000 11839000 9485700 11571000 6966700 12651000 56677 3520 50943 477335;477336;477337;477338;477339;477340;477341;477342;477343;477344;477345 378800;378801;378802;378803;378804;378805;378806;378807;378808;378809;378810 378809 11 VLESVTVHNPENQSYLIAYK Unmodified 2303.1798 0.17976186 3107 Q7Z5K2 WAPAL Wings apart-like protein homolog yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 74.459 74.643 3 0.010839 85681 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 28.202 24.964 37554000 0 0 0 0 0 6583300 2866000 0 0 0 0 14151000 0 0 13954000 56678 3107 50944 477346;477347;477348;477349 378811;378812 378812 2 VLETAEDIQER Unmodified 1301.6463 0.64630969 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.225 40.404 2 0.00022441 45473 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 121.83 75.404 211750000 0 0 0 9819200 8719000 16751000 11952000 9205500 9011100 22629000 23533000 23379000 16566000 24405000 35776000 56679 2344 50945 477350;477351;477352;477353;477354;477355;477356;477357;477358;477359;477360;477361 378813;378814;378815;378816;378817;378818 378818 5 VLETAEDIQERR Unmodified 1457.7474 0.74742071 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 1 1 1 2 1 1 2 2 2 1 2 35.733 36.005 3 9.3792E-06 38594 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 78.903 60.83 275180000 0 0 0 6161000 7119100 14479000 9879800 13891000 6318600 15536000 31414000 57862000 26051000 15455000 71012000 56680 2344 50946 477362;477363;477364;477365;477366;477367;477368;477369;477370;477371;477372;477373;477374;477375;477376;477377;477378 378819;378820;378821;378822;378823;378824;378825;378826;378827;378828;378829;378830;378831;378832 378828 14 VLETFLAK Unmodified 919.53787 0.53786886 2401 Q14258 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By matching 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 63.757 63.485 2 0.016731 73152 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 66.799 11.196 279490000 0 28710000 0 11892000 13983000 17523000 15743000 15772000 11551000 27922000 24741000 23168000 16879000 25335000 46270000 56681 2401 50947 477379;477380;477381;477382;477383;477384;477385;477386;477387;477388;477389;477390;477391 378833;378834;378835;378836;378837;378838;378839 378839 6 VLETKWTLLQEQGTK Unmodified 1772.9672 0.96724989 58 CON__P02538;P02538 KRT6A Keratin, type II cytoskeletal 6A yes no 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 71.505 71.739 3 0.042809 82515 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 26.55 21.122 + 7601000 0 0 0 0 0 0 2437600 0 0 0 0 5163400 0 0 0 56682 58 50948 477392;477393 378840 378840 1 VLETLASSLHTLK Unmodified 1410.8082 0.80823006 2518 Q15345 LRRC41 Leucine-rich repeat-containing protein 41 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 73.812 73.87 3 0.0066292 85080 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 32.295 24.703 57523000 0 0 0 1977000 2228100 5239900 0 4971700 3934100 7393100 4404500 5026600 2924100 5716500 13707000 56683 2518 50949 477394;477395;477396;477397;477398;477399;477400;477401;477402;477403;477404 378841;378842;378843;378844 378842 4 VLETLQEK Unmodified 958.53351 0.53351176 1540 P48506 GCLC Glutamate--cysteine ligase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 35.902 31.087 2 0.021057 38782 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 85.064 46.931 395810000 8153800 384780000 2873300 0 0 0 0 0 0 0 0 0 0 0 0 56684 1540 50950 477405;477406;477407;477408 378845;378846;378847 378846 2 VLETQEQQGPR Unmodified 1283.647 0.64697839 270 O15287 FANCG Fanconi anemia group G protein yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 19.955 20.097 2 0.0088488 20612 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 51.113 40.848 20229000 0 0 0 0 2323100 2768000 1400000 3082800 1320100 2635300 0 4432100 2268000 0 0 56685 270 50951 477409;477410;477411;477412;477413;477414;477415;477416 378848 378848 1 VLETTVEIFNK Unmodified 1291.7024 0.702368 3961 Q96QK1 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 6.46 3.84 4 2 7 3 2 1 1 1 1 1 1 1 1 76.625 74.922 2 2.2479E-05 95127 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 117.53 60.716 1553400000 89443000 1371000000 30062000 0 2860000 5423500 0 4930200 3824100 9565700 10756000 0 0 0 25623000 56686 3961 50952 477417;477418;477419;477420;477421;477422;477423;477424;477425;477426;477427;477428;477429 378849;378850;378851;378852;378853;378854;378855;378856;378857 378855 7 VLEVASGSGQHAAHFAR Unmodified 1735.8754 0.87541519 3980 Q96S19 C16orf13 UPF0585 protein C16orf13 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 1 2 2 2 2 2 2 2 2 2 2 36.993 37.232 3;4 0.00023348 40311 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 61.265 55.361 172950000 0 0 0 5318000 3740000 17096000 12432000 12622000 11536000 14813000 12469000 17008000 17225000 13784000 34907000 56687 3980 50953 477430;477431;477432;477433;477434;477435;477436;477437;477438;477439;477440;477441;477442;477443;477444;477445;477446;477447;477448;477449;477450;477451 378858;378859;378860;378861;378862;378863 378863 6 VLEVNPQNK Unmodified 1039.5662 0.56620887 2294 Q13451 FKBP5 Peptidyl-prolyl cis-trans isomerase FKBP5;Peptidyl-prolyl cis-trans isomerase FKBP5, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 28.57 27.746 2 0.0038523 29424 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 100.19 68.899 576320000 14212000 416040000 0 6214500 6244700 10184000 8226700 5987500 6502100 12238000 17335000 24526000 6799900 16352000 25456000 56688 2294 50954 477452;477453;477454;477455;477456;477457;477458;477459;477460;477461;477462;477463;477464;477465;477466 378864;378865;378866;378867;378868;378869;378870;378871;378872;378873;378874;378875;378876;378877;378878;378879;378880;378881 378879 17 VLEVPPVVYSR Unmodified 1256.7129 0.71287311 120 O00154 ACOT7 Cytosolic acyl coenzyme A thioester hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 2 2 1 1 1 2 2 1 1 1 1 77.673 77.716 2 5.6861E-05 89968 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 114.5 114.5 10374000000 0 0 0 786350000 1757000000 1572700000 18273000 17603000 13095000 1484600000 1878500000 2763500000 17582000 26111000 38891000 56689 120 50955 477467;477468;477469;477470;477471;477472;477473;477474;477475;477476;477477;477478;477479;477480;477481;477482 378882;378883;378884;378885;378886;378887;378888;378889;378890;378891;378892;378893;378894;378895;378896;378897;378898;378899;378900;378901 378900 20 VLEVPPVVYSRQEQEEEGRK Unmodified 2370.2179 0.21793829 120 O00154 ACOT7 Cytosolic acyl coenzyme A thioester hydrolase yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 2 16 1 1 2 3 2 1 3 2 2 1 65.104 64.306 3;4 8.4639E-14 73047 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 85.808 70.043 1737900000 48105000 17949000 0 118610000 124800000 310450000 5033700 0 0 280780000 350620000 474420000 7124000 0 0 56690 120 50956 477483;477484;477485;477486;477487;477488;477489;477490;477491;477492;477493;477494;477495;477496;477497;477498;477499;477500 378902;378903;378904;378905;378906;378907;378908;378909;378910;378911;378912;378913;378914;378915;378916;378917;378918;378919;378920;378921;378922;378923;378924;378925;378926;378927;378928;378929;378930;378931;378932;378933 378913 31 VLEYLNDLK Unmodified 1105.6019 0.60192568 5043 Q9UNW1 MINPP1 Multiple inositol polyphosphate phosphatase 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 77.975 74.262 2 0.0082493 92661 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.657 73.881 96674000 0 92682000 3992100 0 0 0 0 0 0 0 0 0 0 0 0 56691 5043 50957 477501;477502 378934 378934 1 VLFASQEIPASPFR Unmodified 1560.83 0.83002813 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 84.786 84.801 2 8.4593E-61 97978 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 224.58 193.15 147230000 0 0 0 8116900 5952300 14377000 0 0 0 0 22111000 17878000 8459800 15758000 54580000 56692 487 50958 477503;477504;477505;477506;477507;477508;477509;477510;477511 378935;378936;378937;378938;378939;378940;378941;378942;378943;378944;378945 378936 11 VLFASQEIPASPFRVK Unmodified 1787.9934 0.99340506 487 O75369 FLNB Filamin-B yes yes 0 0 1 By MS/MS 2 0 1 1 89.059 80.929 3 0.000389 105253 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.918 54.338 7744300 7744300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56693 487 50959 477512 378946 378946 1 VLFEYIPQNEDELELK Unmodified 1977.9935 0.99352422 5236 Q9Y5K6 CD2AP CD2-associated protein yes yes 0 0 0 By MS/MS 2 0 1 1 92.582 84.452 2 0.0082397 109470 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.473 53.48 6246200 6246200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56694 5236 50960 477513 378947 378947 1 VLFGPEAPK Unmodified 956.53312 0.53311783 1655 P51531 SMARCA2 Probable global transcription activator SNF2L2 yes yes 0 0 0 By MS/MS By MS/MS 3 0 2 1 1 59.74 54.707 2 0.022185 67355 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 73.26 38.368 14878000 518520 14359000 0 0 0 0 0 0 0 0 0 0 0 0 0 56695 1655 50961 477514;477515 378948 378948 1 VLFLIPK Unmodified 828.54731 0.54731133 4811;5279 Q9P289;Q9Y6E0 STK26;STK24 Serine/threonine-protein kinase 26;Serine/threonine-protein kinase 24;Serine/threonine-protein kinase 24 36 kDa subunit;Serine/threonine-protein kinase 24 12 kDa subunit no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.348 81.409 2 0.033387 93596 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.021 61.836 1133100000 0 0 0 48883000 47456000 121550000 67534000 76884000 58863000 126310000 106700000 127110000 68741000 84724000 198380000 56696 4811;5279 50962 477516;477517;477518;477519;477520;477521;477522;477523;477524;477525;477526;477527 378949;378950;378951;378952;378953 378951 5 VLFNITLDSIK Unmodified 1261.7282 0.72818882 4556 Q9NPQ8 RIC8A Synembryn-A yes yes 0 0 0 By MS/MS 2 0 1 1 94.914 86.783 2 0.027178 112333 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.539 35.764 2863300 2863300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56697 4556 50963 477528 378954 378954 1 VLFPLLTK Unmodified 929.59499 0.5949898 3615 Q92538 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 86.245 86.313 2 0.017693 99998 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 65.252 52.699 89592000 0 0 0 4506800 3002700 9850900 5342900 5927900 5944300 8112400 6240000 8960000 6824600 8105200 16774000 56698 3615 50964 477529;477530;477531;477532;477533;477534;477535;477536;477537;477538;477539;477540 378955;378956;378957;378958;378959;378960 378956 5 VLFRPSDTANSSNQDALSSNTSLK Unmodified 2551.2514 0.25142326 3335 Q8N4V1 MMGT1 Membrane magnesium transporter 1 yes yes 0 0 1 By MS/MS 10 0 1 1 61.836 62.013 3 2.5264E-05 70911 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 40.404 25.634 4321600 0 0 0 0 0 0 0 4321600 0 0 0 0 0 0 0 56699 3335 50965 477541 378961 378961 1 VLFSSNGGVVK Unmodified 1105.6132 0.61315906 1208 P26599 PTBP1 Polypyrimidine tract-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 54.961 53.413 2 1.1333E-05 61348 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 138.1 105.26 8225500000 2135900000 1445200000 181470000 228160000 204560000 304100000 318430000 252980000 226500000 437940000 403120000 337420000 382780000 451840000 915210000 56700 1208 50966 477542;477543;477544;477545;477546;477547;477548;477549;477550;477551;477552;477553;477554;477555;477556;477557;477558 378962;378963;378964;378965;378966;378967;378968;378969;378970;378971;378972;378973;378974;378975;378976;378977;378978;378979;378980;378981;378982;378983;378984 378983 21 VLFTEQPETYYK Unmodified 1516.745 0.7449611 3315 Q8N201 INTS1 Integrator complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 70.234 69.887 2 1.1127E-17 87920 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 154.01 137.63 221330000 0 163870000 0 1905900 4108700 5516000 0 5050600 3221300 6538400 4514700 8114800 4471700 5997900 8028200 56701 3315 50967 477559;477560;477561;477562;477563;477564;477565;477566;477567;477568;477569;477570;477571 378985;378986;378987;378988;378989;378990;378991;378992;378993;378994;378995 378988 11 VLFTGVVDAR Unmodified 1075.6026 0.60259438 2427 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 70.088 70.271 2 0.0043308 79852 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 73.233 39.23 22081000 0 0 0 0 0 4857900 0 0 0 0 0 0 4763300 4684700 7774600 56702 2427 50968 477572;477573;477574;477575 378996;378997;378998 378997 3 VLFTSLADNK Unmodified 1106.5972 0.59717465 3441 Q8NF91 SYNE1 Nesprin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 57.816 57.935 2 0.0038168 67128 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 75.109 51.681 1383700000 0 0 0 79819000 68811000 109920000 77367000 64826000 47494000 135860000 136870000 112770000 120320000 145620000 284060000 56703 3441 50969 477576;477577;477578;477579;477580;477581;477582;477583;477584;477585;477586;477587;477588;477589;477590;477591;477592;477593;477594;477595;477596;477597;477598;477599 378999;379000;379001;379002;379003;379004;379005;379006;379007;379008;379009;379010;379011;379012;379013;379014;379015;379016;379017;379018 379015 20 VLGAGGAGPAPATPSR Unmodified 1377.7365 0.7364621 2665 Q32P44 EML3 Echinoderm microtubule-associated protein-like 3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 39.52 39.688 2 0.0006403 43901 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 64.55 45.77 45439000 0 0 0 3502500 3820000 4191300 4015000 0 0 5834200 6080300 4451600 0 5176800 8367400 56704 2665 50970 477600;477601;477602;477603;477604;477605;477606;477607;477608;477609;477610 379019;379020;379021;379022;379023;379024;379025;379026;379027;379028 379024 10 VLGATLLPDLIQK Unmodified 1379.8388 0.8388019 1771 P55786 NPEPPS Puromycin-sensitive aminopeptidase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 90.204 90.29 2 2.1217E-11 104577 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 119.22 97.478 48939000 0 0 0 1428600 0 874960 1264000 1039000 0 1880000 6573400 3315000 887990 3739200 27937000 56705 1771 50971 477611;477612;477613;477614;477615;477616;477617;477618;477619;477620 379029;379030;379031;379032;379033;379034;379035;379036 379030 8 VLGCPEALTGSYK Unmodified 1393.6912 0.69115139 2385 Q14181 POLA2 DNA polymerase alpha subunit B yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 62.458 61.506 2 0.00030564 70038 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 81.865 62.078 641330000 0 538340000 6214400 6185800 8581500 5362600 0 6932000 4451600 8466400 11773000 14466000 8641000 7248500 14664000 56706 2385 50972 477621;477622;477623;477624;477625;477626;477627;477628;477629;477630;477631;477632;477633;477634 379037;379038;379039;379040;379041;379042;379043;379044;379045;379046;379047;379048;379049;379050 379041 14 VLGDVIEVHGK Unmodified 1164.6503 0.65027285 756 P02511 CRYAB Alpha-crystallin B chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.87 6 10 2 2 2 1 1 1 1 1 1 1 1 1 1 51.477 50.455 3 0.0025331 66975 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.066 56.054 196690000 9220200 23524000 24563000 20415000 5311400 0 9283900 20318000 7205300 16225000 0 13490000 11992000 13369000 21774000 56707 756 50973 477635;477636;477637;477638;477639;477640;477641;477642;477643;477644;477645;477646;477647;477648;477649;477650 379051;379052;379053;379054;379055;379056;379057;379058;379059;379060;379061;379062;379063;379064;379065 379055 14 VLGEAMTGISQNAK Oxidation (M) 1433.7184 0.71842877 5187 Q9Y490 TLN1 Talin-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 37.186 36.397 2 3.3152E-88 45911 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 215.56 192.04 554340000 0 387380000 17702000 9750900 7030000 0 12088000 8703200 9480100 15466000 13120000 22461000 18326000 11878000 20954000 56708 5187 50974 477651;477652;477653;477654;477655;477656;477657;477658;477659;477660;477661;477662;477663;477664;477665 379066;379067;379068;379069;379070;379071;379072;379073;379074;379075;379076;379077;379078;379079;379080 379068 6574 15 VLGEAMTGISQNAK Unmodified 1417.7235 0.72351415 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.64 3.88 5 1 8 1 3 2 1 1 1 1 1 1 1 1 55.393 53.101 2;3 1.5347E-100 59044 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 201.84 167.76 1437700000 30435000 1144900000 28239000 21954000 19118000 0 30363000 21405000 0 28769000 0 0 25926000 49815000 36730000 56709 5187 50974 477666;477667;477668;477669;477670;477671;477672;477673;477674;477675;477676;477677;477678;477679 379081;379082;379083;379084;379085;379086;379087;379088;379089;379090;379091;379092;379093;379094;379095 379092 14 VLGENYTLEDEEDSQICTVGR Unmodified 2426.0907 0.09074844 2481 Q15029 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 2 2 1 2 2 74.197 74.347 2;3 2.7868E-48 85252 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 146.47 136.42 63398000 0 0 0 0 2315800 0 0 0 0 13898000 13053000 5627000 0 8537200 19967000 56710 2481 50975 477680;477681;477682;477683;477684;477685;477686;477687;477688;477689 379096;379097;379098;379099;379100;379101;379102 379098 6 VLGESMAGISQNAK Oxidation (M) 1419.7028 0.70277871 5201 Q9Y4G6 TLN2 Talin-2 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 37.763 32.979 2 0.00038038 43154 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.229 78.793 21795000 0 21795000 0 0 0 0 0 0 0 0 0 0 0 0 0 56711 5201 50976 477690;477691 379103;379104 379103 6599 2 VLGESMAGISQNAK Unmodified 1403.7079 0.70786408 5201 Q9Y4G6 TLN2 Talin-2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 56.736 51.392 2 5.7077E-31 66281 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 149.96 109.23 88184000 0 88184000 0 0 0 0 0 0 0 0 0 0 0 0 0 56712 5201 50976 477692;477693 379105;379106 379105 2 VLGGNQTLTVNVEGTK Unmodified 1628.8733 0.87334951 3081 Q7Z3B4 NUP54 Nucleoporin p54 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 62.424 61.878 2 0.00029966 77776 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.71 99.07 74742000 0 42755000 0 0 2011200 4448900 0 3555900 4046600 4711000 4064800 5755300 0 3393400 0 56713 3081 50977 477694;477695;477696;477697;477698;477699;477700;477701;477702;477703 379107;379108;379109;379110;379111;379112;379113;379114;379115;379116 379109 10 VLGGSFADQK Unmodified 1020.524 0.52400971 3701;164 O00507;Q93008 USP9Y;USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-Y;Probable ubiquitin carboxyl-terminal hydrolase FAF-X no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.42 3.66 3 1 8 1 2 1 1 1 1 1 1 1 1 1 38.558 37.013 2 0.002134 41878 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 86.136 58.029 697580000 39614000 466520000 14856000 15152000 0 21304000 15847000 16226000 0 0 22417000 0 23013000 22092000 40533000 56714 164;3701 50978 477704;477705;477706;477707;477708;477709;477710;477711;477712;477713;477714;477715 379117;379118;379119;379120;379121;379122;379123;379124;379125;379126;379127;379128 379128 10 VLGILAMIDEGETDWK Unmodified 1788.8968 0.89678707 2505 Q15181 PPA1 Inorganic pyrophosphatase yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 100.11 94.709 2 1.8639E-73 118830 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 199.43 187.22 281570000 252390000 29180000 0 0 0 0 0 0 0 0 0 0 0 0 0 56715 2505 50979 477716;477717;477718 379129;379130;379131 379131 3 VLGIQVDTDGSGR Unmodified 1315.6732 0.67319314 1333 P33992 MCM5 DNA replication licensing factor MCM5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 58.296 58.673 2 0.0052383 65802 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.466 52.009 55165000 0 0 0 0 0 0 0 5611400 0 0 0 13446000 0 10663000 25445000 56716 1333 50980 477719;477720;477721;477722 379132;379133;379134;379135 379132 3 VLGIYTFTK Unmodified 1040.5906 0.59063271 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 76.83 76.258 2 0.005211 88149 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 80.165 44.81 163000000 37337000 0 0 5590000 5624900 10904000 7069500 7782500 7352000 12054000 11657000 15134000 9115800 10448000 22930000 56717 2775 50981 477723;477724;477725;477726;477727;477728;477729;477730;477731;477732;477733;477734;477735 379136;379137;379138;379139;379140;379141;379142;379143;379144 379139 9 VLGLAHSTTGPQESK Unmodified 1523.7944 0.79437091 2453 Q14865 ARID5B AT-rich interactive domain-containing protein 5B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.5 2.93 4 1 1 2 2 1 1 39.72 35.33 2;3 0.0056766 49451 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.803 73.263 84761000 48373000 18367000 8245400 0 0 0 0 0 0 0 0 0 9775900 0 0 56718 2453 50982 477736;477737;477738;477739;477740;477741 379145;379146;379147;379148;379149 379147 3 VLGLNEDPLK Unmodified 1096.6128 0.61282471 712 O96006 ZBED1 Zinc finger BED domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 72.867 71.708 2 0.0009285 82634 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 112.84 80.001 541590000 10928000 341520000 9165400 9906400 10898000 16242000 12342000 13388000 10932000 17451000 14531000 18226000 15165000 14041000 26854000 56719 712 50983 477742;477743;477744;477745;477746;477747;477748;477749;477750;477751;477752;477753;477754;477755;477756;477757 379150;379151;379152;379153;379154;379155;379156;379157;379158;379159;379160;379161;379162;379163;379164 379150 15 VLGLSQGSVSDMLSRPK Unmodified 1772.9455 0.94546859 1406 P39880 CUX1 Homeobox protein cut-like 1 no no 0 0 1 By MS/MS 10 0 1 1 76.565 76.852 3 0.0041646 88290 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.178 45.274 6043800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6043800 56720 1406 50984 477758 379165 379165 0 VLGLVLLR Unmodified 881.60622 0.60622319 1005 P63162;P14678 SNRPN;SNRPB Small nuclear ribonucleoprotein-associated protein N;Small nuclear ribonucleoprotein-associated proteins B and B' yes no 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 85.55 85.516 2 0.030584 98706 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.441 55.441 8822000 0 0 0 1123300 0 0 0 0 0 0 0 0 0 1905800 5792900 56721 1005 50985 477759;477760;477761 379166 379166 1 VLGMDPLPQMSQR 2 Oxidation (M) 1502.7221 0.72213394 3913 Q96KR1 ZFR Zinc finger RNA-binding protein yes yes 0 2 0 By MS/MS 10 0 1 1 48.932 49.252 2 0.029652 55711 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 40.715 22.851 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56722 3913 50986 477762 379167 379167 1 VLGMDPLPSK Oxidation (M) 1071.5634 0.56343168 2207 Q12906 ILF3 Interleukin enhancer-binding factor 3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.83 3.76 3 2 7 2 2 1 1 1 1 1 1 1 1 48.094 45.569 2 0.00079496 58867 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.62 104.03 577270000 16008000 347730000 18287000 27347000 25101000 30287000 0 15064000 0 0 0 0 53783000 0 43659000 56723 2207 50987 477763;477764;477765;477766;477767;477768;477769;477770;477771;477772;477773;477774 379168;379169;379170;379171;379172;379173;379174;379175;379176;379177;379178;379179;379180;379181 379172 3597 12 VLGMDPLPSK Unmodified 1055.5685 0.56851706 2207 Q12906 ILF3 Interleukin enhancer-binding factor 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 66.131 64.54 2 0.0015959 75085 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 93.649 76.263 1004700000 18134000 754300000 11066000 19542000 15231000 22211000 15002000 14382000 13182000 31940000 0 29221000 25122000 35326000 0 56724 2207 50987 477775;477776;477777;477778;477779;477780;477781;477782;477783;477784;477785;477786;477787;477788 379182;379183;379184;379185;379186;379187;379188;379189;379190;379191;379192;379193;379194;379195;379196;379197 379195 16 VLGMTLIQK Oxidation (M) 1017.5893 0.5892525 2106 Q04760 GLO1 Lactoylglutathione lyase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 48.925 49.504 2 0.0087331 54717 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.074 19.971 57411000 0 0 0 0 0 0 0 0 0 0 19865000 0 0 0 37546000 56725 2106 50988 477789;477790;477791 379198;379199 379198 3410 2 VLGMTLIQK Unmodified 1001.5943 0.59433788 2106 Q04760 GLO1 Lactoylglutathione lyase yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 70.804 71.111 2 0.044933 81117 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 75.692 57.368 106910000 0 0 0 0 0 0 0 0 0 0 13120000 14223000 0 9889900 69679000 56726 2106 50988 477792;477793;477794;477795 379200 379200 0 VLGPCSDILK Unmodified 1100.59 0.58998078 927 P10644 PRKAR1A cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.385 62.482 2 0.0052248 71219 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 69.812 52.572 106040000 0 0 0 3747900 4885300 9635900 5196600 4555800 6080800 7778700 10686000 18435000 8345000 9248000 17445000 56727 927 50989 477796;477797;477798;477799;477800;477801;477802;477803;477804;477805;477806;477807 379201;379202;379203;379204;379205;379206;379207;379208;379209;379210;379211;379212 379201 12 VLGPYVDGLSQLAVTSFEDIESLMSEGNK Unmodified 3097.5165 0.51654765 4350 Q9H1H9 KIF13A Kinesin-like protein KIF13A yes yes 0 0 0 By MS/MS 3 0 1 1 105.89 102.22 3 0.04637 122940 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 15.764 13.388 1495200 0 1495200 0 0 0 0 0 0 0 0 0 0 0 0 0 56728 4350 50990 477808 379213 379213 1 VLGQGEEWRGGDGINSIGGGQK Unmodified 2213.0825 0.082507436 159 O00469 PLOD2 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 yes yes 0 0 1 By matching By MS/MS 2 0 2 1 1 67.982 61.963 3 0.0036271 76872 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 37.672 34.283 8135500 4428900 0 3706500 0 0 0 0 0 0 0 0 0 0 0 0 56729 159 50991 477809;477810 379214;379215 379214 2 VLGQGSFGK Unmodified 891.48142 0.48141661 2531;1672 Q15418;P51812;Q9UK32 RPS6KA1;RPS6KA3;RPS6KA6 Ribosomal protein S6 kinase alpha-1;Ribosomal protein S6 kinase alpha-3;Ribosomal protein S6 kinase alpha-6 no no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 34.309 33.224 2 0.0072915 40885 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 94.114 45.941 1583700000 695540000 395840000 69370000 22297000 19798000 47580000 28582000 20379000 20335000 52459000 41931000 39530000 34362000 33964000 61680000 56730 2531;1672 50992 477811;477812;477813;477814;477815;477816;477817;477818;477819;477820;477821;477822;477823;477824;477825;477826 379216;379217;379218;379219;379220;379221;379222;379223;379224;379225 379220 3 VLGQLHGGPSSCSATGTNR Unmodified 1897.9065 0.90645733 75 CON__P15636 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 31 3 2 3 2 2 3 2 3 2 4 3 2 33.566 33.745 2;3 9.0855E-246 37140 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 187.39 181.97 + 5834400000 0 0 0 472210000 294980000 447840000 303700000 288120000 532440000 400970000 1035600000 701110000 567660000 345820000 443940000 56731 75 50993 477827;477828;477829;477830;477831;477832;477833;477834;477835;477836;477837;477838;477839;477840;477841;477842;477843;477844;477845;477846;477847;477848;477849;477850;477851;477852;477853;477854;477855;477856;477857 379226;379227;379228;379229;379230;379231;379232;379233;379234;379235;379236;379237;379238;379239;379240;379241;379242;379243;379244;379245;379246;379247;379248;379249;379250;379251;379252;379253;379254 379254 22 VLGQLHGGPSSCSATGTNRSDQYGR Unmodified 2604.2099 0.20990957 75 CON__P15636 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 1 1 1 1 1 1 2 2 2 2 1 36.788 37.039 3;4 5.7442E-91 40401 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 136.64 125.65 + 291920000 0 0 0 15616000 8615200 17615000 15939000 14823000 36455000 20549000 39465000 53484000 32173000 17911000 19277000 56732 75 50994 477858;477859;477860;477861;477862;477863;477864;477865;477866;477867;477868;477869;477870;477871;477872;477873 379255;379256;379257;379258;379259;379260;379261;379262;379263;379264;379265;379266;379267;379268;379269;379270;379271;379272 379268 17 VLGQLTETGVVSPEQFMK Oxidation (M) 1978.0081 0.0081284304 3814 Q96EK6 GNPNAT1 Glucosamine 6-phosphate N-acetyltransferase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.59 2 1 20 2 1 2 2 2 1 2 2 2 2 2 1 2 79.74 79.327 2;3 0 97964 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 318.49 302.12 3224800000 0 853260000 17591000 88183000 256560000 264750000 41821000 83151000 73604000 464480000 443880000 581830000 0 10741000 44978000 56733 3814 50995 477874;477875;477876;477877;477878;477879;477880;477881;477882;477883;477884;477885;477886;477887;477888;477889;477890;477891;477892;477893;477894;477895;477896 379273;379274;379275;379276;379277;379278;379279;379280;379281;379282;379283;379284;379285;379286;379287;379288;379289;379290 379277 5342 16 VLGQLTETGVVSPEQFMK Unmodified 1962.0132 0.013213808 3814 Q96EK6 GNPNAT1 Glucosamine 6-phosphate N-acetyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.54 5 1 15 4 2 1 2 2 1 1 1 2 2 2 1 86.935 86.084 2;3 1.7106E-277 106811 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 272.54 268.2 1654600000 0 1426800000 14971000 1700900 21239000 15800000 1879800 7242300 3936100 50012000 44773000 58584000 0 0 7618700 56734 3814 50995 477897;477898;477899;477900;477901;477902;477903;477904;477905;477906;477907;477908;477909;477910;477911;477912;477913;477914;477915;477916;477917 379291;379292;379293;379294;379295;379296;379297;379298;379299;379300;379301;379302;379303;379304;379305;379306;379307 379294 15 VLGQPHHELDSK Unmodified 1358.6943 0.69426293 3797 Q96DH6 MSI2 RNA-binding protein Musashi homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 2 1 1 1 1 1 1 1 1 1 1 2 20.919 20.217 2;3 6.7024E-24 27322 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 168.22 129.44 365910000 182180000 0 19196000 0 6169000 9107800 8924600 0 7174900 13495000 15379000 17244000 12576000 11415000 63052000 56735 3797 50996 477918;477919;477920;477921;477922;477923;477924;477925;477926;477927;477928;477929;477930;477931 379308;379309;379310;379311;379312;379313 379310 6 VLGSEGEEEDEALSPAK Unmodified 1758.816 0.81595379 1081 P18858 LIG1 DNA ligase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 49.335 49.477 2 5.9241E-46 54846 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 176.51 153.59 158390000 0 0 0 10769000 10852000 21505000 14686000 8186400 0 16229000 15332000 19337000 0 13982000 27509000 56736 1081 50997 477932;477933;477934;477935;477936;477937;477938;477939;477940;477941 379314;379315;379316;379317;379318;379319;379320;379321;379322;379323 379317 9 VLGSSTSATNSTSVSSR Unmodified 1639.8013 0.80130678 2468 Q15004 KIAA0101 PCNA-associated factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.127 27.324 2 1.2381E-126 29473 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 200.44 183.42 181090000 0 0 0 12921000 11664000 15941000 9522400 11118000 7826900 16503000 17015000 28619000 10978000 9992100 28984000 56737 2468 50998 477942;477943;477944;477945;477946;477947;477948;477949;477950;477951;477952;477953 379324;379325;379326;379327;379328;379329;379330;379331;379332;379333;379334;379335 379324 12 VLGSSTSATNSTSVSSRK Unmodified 1767.8963 0.8962698 2468 Q15004 KIAA0101 PCNA-associated factor yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 2 1 1 1 1 1 1 1 1 1 1 1 1 21.436 20.632 2;3 9.2894E-31 21533 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 117.18 99.08 466880000 89977000 0 4376400 28978000 27112000 33105000 20165000 26925000 21084000 38078000 52373000 51739000 28488000 0 44475000 56738 2468 50999 477954;477955;477956;477957;477958;477959;477960;477961;477962;477963;477964;477965;477966;477967 379336;379337;379338;379339;379340;379341;379342;379343;379344;379345;379346;379347;379348;379349;379350;379351;379352 379336 17 VLGTAFDPFLGGK Unmodified 1320.7078 0.70778773 3633 Q92598 HSPH1 Heat shock protein 105 kDa yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 87.745 86.627 2 3.6561E-10 100087 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 117.67 86.444 1870200000 865310000 687740000 130540000 1906500 3286800 7950800 4113600 6317000 6026600 7671400 18318000 23176000 7901800 18416000 81558000 56739 3633 51000 477968;477969;477970;477971;477972;477973;477974;477975;477976;477977;477978;477979;477980;477981;477982;477983 379353;379354;379355;379356;379357;379358;379359;379360;379361;379362;379363;379364;379365;379366;379367;379368 379356 16 VLGTEAVQDPTK Unmodified 1256.6612 0.66123147 323 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 39.57 40 2 1.4288E-15 43209 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 157.75 112.99 434380000 0 0 0 0 0 77223000 0 0 0 77302000 101220000 91975000 0 0 86668000 56740 323 51001 477984;477985;477986;477987;477988 379369;379370;379371;379372 379370 3 VLGTEDLYDYIDK Unmodified 1542.7454 0.74535503 1964 P68400 CSNK2A1 Casein kinase II subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 84.053 82.89 2 2.8445E-13 95579 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 138.25 118.49 1313100000 56472000 1106300000 21868000 0 3909600 3740900 3649200 7058200 4918500 10149000 13280000 14172000 8021000 10402000 49124000 56741 1964 51002 477989;477990;477991;477992;477993;477994;477995;477996;477997;477998;477999;478000;478001;478002;478003 379373;379374;379375;379376;379377;379378;379379;379380;379381;379382;379383;379384;379385;379386;379387 379384 14 VLGTEELYGYLK Unmodified 1383.7286 0.72858275 1094 P19784 CSNK2A2 Casein kinase II subunit alpha' yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.06 3.8 5 1 10 1 3 2 1 1 1 1 1 1 1 1 1 1 83.971 82.267 2 2.3138E-05 102006 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.4 94.557 509780000 16509000 427310000 22652000 2231300 1830500 3847300 2432300 3499700 0 4584500 0 3374000 0 3702700 17804000 56742 1094 51003 478004;478005;478006;478007;478008;478009;478010;478011;478012;478013;478014;478015;478016;478017;478018;478019 379388;379389;379390;379391;379392;379393;379394;379395;379396;379397;379398;379399 379390 11 VLGTGAYGK Unmodified 864.47052 0.47051757 520 O75582 RPS6KA5 Ribosomal protein S6 kinase alpha-5 no no 0 0 0 By MS/MS 2 0 1 1 29.649 24.029 2 0.020072 33764 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.692 41.954 28867000 28867000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56743 520 51004 478020 379400 379400 1 VLGTNHPDVAK Unmodified 1149.6142 0.6142217 4629 Q9NSK0 KLC4 Kinesin light chain 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 2 20 1 1 2 2 1 2 2 1 1 2 2 2 1 2 21.646 21.461 2;3 0.00064166 22059 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 78.556 30.954 537970000 230990000 0 67802000 18356000 20926000 3126300 28838000 23635000 15167000 3833200 26900000 34013000 22674000 15841000 25871000 56744 4629 51005 478021;478022;478023;478024;478025;478026;478027;478028;478029;478030;478031;478032;478033;478034;478035;478036;478037;478038;478039;478040;478041;478042 379401;379402;379403;379404;379405;379406;379407;379408;379409;379410;379411;379412;379413;379414;379415;379416;379417;379418 379402 15 VLGTPVETIELTEDR Unmodified 1670.8727 0.87268081 1224 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 12.777 12.802 4 0.01134 12180 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 19.694 10.157 23054000 0 0 0 4807900 3968100 0 5669200 0 0 0 0 0 5086500 3522000 0 56745 1224 51006 478043;478044;478045;478046;478047 379419 379419 1 VLGTPVETIELTEDRR Unmodified 1826.9738 0.97379183 1224 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 74.322 74.481 3 7.225E-20 85937 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 107.61 74.308 155100000 0 0 0 0 0 15269000 6049900 8653600 8926500 15852000 0 29605000 15538000 15635000 39567000 56746 1224 51007 478048;478049;478050;478051;478052;478053;478054;478055;478056;478057 379420;379421;379422;379423;379424;379425;379426;379427;379428;379429;379430;379431;379432;379433 379433 14 VLGTSPEAIDSAENR Unmodified 1557.7635 0.76346471 1224 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 49.196 49.431 2 1.2641E-41 54866 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 162.68 141.81 176250000 0 0 0 0 11002000 20852000 16386000 0 9215700 19663000 18267000 22456000 13433000 17949000 27027000 56747 1224 51008 478058;478059;478060;478061;478062;478063;478064;478065;478066;478067;478068 379434;379435;379436;379437;379438;379439;379440;379441;379442;379443;379444 379437 11 VLGTSPEAIDSAENRFK Unmodified 1832.9268 0.92684164 1224 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 64.348 64.433 3 0.00039971 73480 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 56.746 45.891 119430000 0 0 0 0 7597000 18089000 9476100 9299900 12164000 21047000 16664000 0 10704000 14384000 0 56748 1224 51009 478069;478070;478071;478072;478073;478074;478075;478076;478077 379445;379446;379447;379448;379449;379450;379451;379452;379453 379449 9 VLGTSVESIMATEDR Unmodified 1606.7872 0.78723662 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.658 76.766 2 2.0619E-14 88102 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 101.72 59.658 91951000 0 0 0 0 3372200 7018700 4005300 6827900 3941900 10498000 10006000 6909200 5665300 8291200 25416000 56749 1300 51010 478078;478079;478080;478081;478082;478083;478084;478085;478086;478087;478088 379454;379455;379456;379457;379458;379459;379460;379461;379462;379463;379464;379465 379457 12 VLGTSVESIMATEDRQLFSDK Unmodified 2325.1522 0.15222649 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 94.214 87.701 3 0.00029638 111167 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.093 54.065 32535000 8618900 23916000 0 0 0 0 0 0 0 0 0 0 0 0 0 56750 1300 51011 478089;478090 379466;379467 379467 2 VLGTSVESIMATEDRQLFSDK Oxidation (M) 2341.1471 0.14714111 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 1 1 By MS/MS 2 0 1 1 83.721 75.59 3 0.0017859 98860 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.229 40.142 11603000 11603000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56751 1300 51011 478091 379468 379468 1922 0 VLGTTEEISGK Unmodified 1132.5976 0.59756858 3520 Q8TEU7 RAPGEF6 Rap guanine nucleotide exchange factor 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 35.651 35.697 2 0.042365 39379 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 53.517 28.998 34865000 0 0 0 0 5542200 0 5284800 5408400 5943700 0 0 0 12686000 0 0 56752 3520 51012 478092;478093;478094;478095;478096 379469 379469 0 VLGVLEVSR Unmodified 970.58113 0.58113065 4322 Q9H0C8 ILKAP Integrin-linked kinase-associated serine/threonine phosphatase 2C yes yes 0 0 0 By MS/MS 10 0 1 1 64.635 64.816 2 0.027398 74177 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 49.423 4.7018 3822600 0 0 0 0 0 0 0 3822600 0 0 0 0 0 0 0 56753 4322 51013 478097 379470 379470 1 VLGVPIIVQASQAEK Unmodified 1550.9032 0.90319307 2410 Q14498 RBM39 RNA-binding protein 39 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 83.267 83.331 2;3 5.5095E-05 95917 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.819 68.174 1890100000 0 0 0 60850000 94013000 127910000 122100000 121000000 112570000 217750000 215520000 244520000 150220000 175040000 248600000 56754 2410 51014 478098;478099;478100;478101;478102;478103;478104;478105;478106;478107;478108;478109;478110;478111;478112;478113;478114;478115;478116;478117;478118;478119;478120;478121 379471;379472;379473;379474;379475;379476;379477;379478;379479;379480;379481;379482;379483 379474 8 VLGVPPPQIFWK Unmodified 1379.7965 0.79654316 3581 Q8WX93 PALLD Palladin yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 90.109 90.241 2 0.021405 104355 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.002 34.799 8752400 0 0 0 0 0 785600 0 898700 606390 1055700 0 0 0 773410 4632500 56755 3581 51015 478122;478123;478124;478125;478126;478127 379484;379485 379484 2 VLGVSGSQSR Unmodified 988.53016 0.53015772 1522 P47712 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 21.896 22.096 2 0.0061028 23136 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 66.273 14.486 222850000 0 0 0 0 15041000 21962000 17601000 16262000 10653000 33004000 17854000 39737000 31640000 19098000 0 56756 1522 51016 478128;478129;478130;478131;478132;478133;478134;478135;478136;478137 379486;379487;379488;379489;379490;379491;379492 379487 2 VLHAAASAGEHEK Unmodified 1318.663 0.6629628 3559 Q8WVB6 CHTF18 Chromosome transmission fidelity protein 18 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 1 1 1 2 2 2 2 2 2 2 2 7.9592 8.1238 2;3 2.5277E-33 6485 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 150.49 140.43 293530000 0 0 0 6374600 6211800 4394400 6778300 11507000 7494900 21123000 95276000 39117000 32567000 29492000 33198000 56757 3559 51017 478138;478139;478140;478141;478142;478143;478144;478145;478146;478147;478148;478149;478150;478151;478152;478153;478154;478155;478156;478157 379493;379494;379495;379496;379497;379498;379499;379500;379501;379502;379503;379504;379505;379506 379502 10 VLHAEQEK Unmodified 952.49779 0.49779495 2768 Q5T1M5 FKBP15 FK506-binding protein 15 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 6.8863 4.156 2 0.018267 6050 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 88.954 53.336 31726000 0 16233000 15492000 0 0 0 0 0 0 0 0 0 0 0 0 56758 2768 51018 478158;478159 379507 379507 1 VLHEAEGHIVTCETNTGEVYR Unmodified 2413.1332 0.13322238 1895 P62318 SNRPD3 Small nuclear ribonucleoprotein Sm D3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 2 2 3 47.824 48.078 3;4 9.0792E-72 53890 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 152.04 144.5 585530000 0 0 0 0 12518000 33366000 17834000 31491000 32139000 67586000 23419000 64650000 31874000 64351000 206300000 56759 1895 51019 478160;478161;478162;478163;478164;478165;478166;478167;478168;478169;478170;478171;478172;478173;478174;478175;478176;478177;478178;478179;478180;478181;478182 379508;379509;379510;379511;379512;379513;379514;379515;379516;379517;379518;379519;379520;379521;379522;379523;379524;379525;379526;379527;379528;379529;379530;379531;379532;379533 379518 25 VLHEAEGHIVTCETNTGEVYRGK Unmodified 2598.2496 0.24964912 1895 P62318 SNRPD3 Small nuclear ribonucleoprotein Sm D3 yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 50.593 43.991 4;5 1.1333E-13 60520 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.689 81.353 438250000 432700000 0 5555500 0 0 0 0 0 0 0 0 0 0 0 0 56760 1895 51020 478183;478184;478185 379534;379535;379536 379535 2 VLHEEEK Unmodified 882.4447 0.44469675 2255 Q13227 GPS2 G protein pathway suppressor 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 5.859 3.1363 2 0.043702 5089 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.116 48.447 118770000 0 75623000 43150000 0 0 0 0 0 0 0 0 0 0 0 0 56761 2255 51021 478186;478187 379537 379537 1 VLHEEHVELLMEEFAFLK Unmodified 2212.1238 0.12382689 1708 P53004 BLVRA Biliverdin reductase A yes yes 0 0 0 By MS/MS 3 0 1 1 97.81 94.298 3 0.01869 97768 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 30.974 23.352 1160800 1160800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56762 1708 51022 478188 379538 379538 1 VLHFDQVTENTTEK Unmodified 1659.8104 0.8104149 1545 P48594 SERPINB4 Serpin B4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 49.423 49.556 3 3.3744E-08 56793 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 70.68 68.149 736810000 0 0 0 501490000 24677000 18402000 27292000 16708000 0 40035000 26202000 60571000 0 0 21429000 56763 1545 51023 478189;478190;478191;478192;478193;478194;478195;478196;478197 379539;379540;379541;379542;379543;379544;379545;379546;379547;379548;379549;379550 379546 12 VLHFDQVTENTTGK Unmodified 1587.7893 0.78928553 1251 P29508 SERPINB3 Serpin B3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 2 18 1 1 3 1 2 2 1 1 2 1 1 1 1 2 49.978 49.458 2;3 2.4619E-12 56836 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 73.502 60.365 1219800000 10857000 0 5386200 840410000 33764000 43563000 34442000 28470000 30093000 51152000 28516000 41134000 16582000 17542000 37856000 56764 1251 51024 478198;478199;478200;478201;478202;478203;478204;478205;478206;478207;478208;478209;478210;478211;478212;478213;478214;478215;478216;478217 379551;379552;379553;379554;379555;379556;379557;379558;379559;379560;379561;379562;379563;379564;379565;379566;379567;379568;379569;379570;379571;379572;379573 379568 23 VLHFPNPEDK Unmodified 1194.6033 0.60332266 2484 Q15042 RAB3GAP1 Rab3 GTPase-activating protein catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 4 1 1 2 59.105 53.661 2;3 0.0046206 73504 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.557 57.75 275580000 160890000 61704000 52980000 0 0 0 0 0 0 0 0 0 0 0 0 56765 2484 51025 478218;478219;478220;478221 379574;379575;379576;379577 379575 4 VLHGEQYLELYK Unmodified 1490.7769 0.77692993 1667 P51659 HSD17B4 Peroxisomal multifunctional enzyme type 2;(3R)-hydroxyacyl-CoA dehydrogenase;Enoyl-CoA hydratase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 68.995 67.224 3 0.00056235 89714 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.488 62.705 52120000 27732000 0 2483900 0 0 5347600 0 0 3580100 4040100 0 0 0 0 8936000 56766 1667 51026 478222;478223;478224;478225;478226;478227 379578;379579;379580 379580 3 VLHMDRNPYYGGESASITPLEDLYK Oxidation (M) 2883.3749 0.37490921 1620 P50395 GDI2 Rab GDP dissociation inhibitor beta yes yes 0 1 1 By MS/MS 3 0 1 1 82.979 79.706 4 7.157E-05 95472 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 55.128 52.263 10054000 0 10054000 0 0 0 0 0 0 0 0 0 0 0 0 0 56767 1620 51027 478228 379581 379581 2602 1 VLHMSLNPTSVAR Unmodified 1423.7606 0.76056836 5278 Q9Y6D9 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 1 1 2 63.051 63.183 2;3 3.9777E-07 72034 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 74.698 67.122 207860000 0 0 0 6081200 6054400 13219000 9763300 18113000 8351900 19764000 19400000 24206000 13767000 18747000 50392000 56768 5278 51028 478229;478230;478231;478232;478233;478234;478235;478236;478237;478238;478239;478240;478241 379582;379583;379584;379585;379586;379587;379588;379589;379590;379591;379592;379593;379594;379595 379583 13 VLHMSLNPTSVAR Oxidation (M) 1439.7555 0.75548298 5278 Q9Y6D9 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes yes 0 1 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 42.635 42.736 3 0.00107 47873 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 69.03 61.575 91564000 0 0 0 6542000 6635600 5212000 13776000 12956000 0 0 17405000 17268000 11770000 0 0 56769 5278 51028 478242;478243;478244;478245;478246;478247;478248;478249 379596;379597;379598;379599 379596 6688 0 VLHNAQEVEK Unmodified 1165.6091 0.60913632 1613 P49916 LIG3 DNA ligase 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 2 1 1 1 1 1 1 2 2 11.899 12.034 2;3 0.0064962 9867 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 56.404 35.032 48512000 0 0 0 3095800 3865800 4128000 4073900 3710500 3240500 4201900 0 5490900 5245500 4137000 7321900 56770 1613 51029 478250;478251;478252;478253;478254;478255;478256;478257;478258;478259;478260;478261;478262;478263 379600;379601;379602 379601 2 VLHVSENPVPLTVR Unmodified 1558.8831 0.88312633 3314 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.386 67.468 3 0.0018105 77383 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 81.709 73.985 178960000 0 0 0 9127300 6754000 22451000 9829500 6779400 11087000 17473000 17823000 23193000 8954500 13209000 32282000 56771 3314 51030 478264;478265;478266;478267;478268;478269;478270;478271;478272;478273;478274;478275 379603;379604;379605;379606;379607;379608;379609 379606 3 VLHYGDLDDNPQGEVTFESLQEK Unmodified 2632.2293 0.22929083 3895 Q96JJ3 ELMO2 Engulfment and cell motility protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 81.857 77.191 3 2.3957E-102 97199 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.54 105.06 63672000 16358000 42116000 5197400 0 0 0 0 0 0 0 0 0 0 0 0 56772 3895 51031 478276;478277;478278;478279 379610;379611;379612;379613 379610 4 VLIAAHGNSLR Unmodified 1149.6618 0.66184059 1077 P18669;P15259 PGAM1;PGAM2 Phosphoglycerate mutase 1;Phosphoglycerate mutase 2 yes no 0 0 0 By MS/MS By MS/MS By matching By matching 10 0 4 1 1 1 1 35.054 35.615 2 0.012009 38649 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 44.98 39.501 35561000 0 0 0 0 0 0 0 0 0 0 4894100 8363200 0 4099800 18204000 56773 1077 51032 478280;478281;478282;478283 379614;379615 379615 1 VLIALLAR Unmodified 867.59057 0.59057313 3395 Q8NBJ5 COLGALT1 Procollagen galactosyltransferase 1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 82.086 82.146 2 0.030584 94555 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.441 17.796 21289000 0 0 0 485480 658760 1694800 932240 985210 1099800 2339200 1571200 3226000 0 2115500 6180800 56774 3395 51033 478284;478285;478286;478287;478288;478289;478290;478291;478292;478293;478294 379616;379617 379616 2 VLIANNGIAAVK Unmodified 1181.7132 0.71320746 2231;180 Q13085;O00763 ACACA;ACACB Acetyl-CoA carboxylase 1;Biotin carboxylase;Acetyl-CoA carboxylase 2;Biotin carboxylase no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 61.7 60.69 2 0.0005221 69750 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 78.334 53.412 465370000 100240000 263640000 0 4668500 5840900 9215400 7538100 0 4756400 12059000 10028000 14215000 8439500 9271100 15462000 56775 2231;180 51034 478295;478296;478297;478298;478299;478300;478301;478302;478303;478304;478305;478306;478307 379618;379619;379620;379621;379622;379623;379624;379625 379625 7 VLIAQEK Unmodified 799.48035 0.48035398 1291 P30876 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.42 3.66 3 1 8 1 2 1 1 1 1 1 1 1 1 1 25.134 23.822 2 0.027727 29115 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 97.068 48.894 278590000 8024100 190650000 3972900 0 5817200 8404000 0 7229100 6438300 7763400 0 0 11821000 7823000 20654000 56776 1291 51035 478308;478309;478310;478311;478312;478313;478314;478315;478316;478317;478318;478319 379626;379627;379628;379629 379628 4 VLIASNNK Unmodified 857.49707 0.49706667 3877 Q96II8 LRCH3 Leucine-rich repeat and calponin homology domain-containing protein 3 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.813 19.008 2 0.033366 17991 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.754 17.948 67376000 0 0 0 4261200 4235400 4983800 5295100 6035800 4260100 7383900 5505500 6605200 6099900 5107000 7603000 56777 3877 51036 478320;478321;478322;478323;478324;478325;478326;478327;478328;478329;478330;478331 379630;379631;379632;379633 379630 4 VLIDIREYWMDPEGEMK 2 Oxidation (M) 2154.9966 0.99657747 1730 P53999 SUB1 Activated RNA polymerase II transcriptional coactivator p15 yes yes 0 2 1 By MS/MS 2 0 1 1 90.054 81.924 3 0.0010464 106392 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.429 71.486 75983000 75983000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56778 1730 51037 478332 379634;379635 379635 2808;2809 2 VLIDIREYWMDPEGEMK Oxidation (M) 2139.0017 0.001662844 1730 P53999 SUB1 Activated RNA polymerase II transcriptional coactivator p15 yes yes 0 1 1 By MS/MS 2 0 2 2 93.132 85.001 3 0.00037834 109464 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.275 54.353 149730000 149730000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56779 1730 51037 478333;478334 379636;379637;379638 379636 2808;2809 3 VLIDIREYWMDPEGEMK Unmodified 2123.0067 0.0067482219 1730 P53999 SUB1 Activated RNA polymerase II transcriptional coactivator p15 yes yes 0 0 1 By MS/MS 2 0 1 1 95.943 87.812 3 3.0244E-46 113454 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 108.71 100.49 83517000 83517000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56780 1730 51037 478335 379639 379639 1 VLIDPVSVQDK Unmodified 1211.6762 0.67615325 1441 P41252 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.89 3.41 3 2 13 2 2 1 1 1 1 2 1 1 1 1 1 1 1 1 65.056 63.589 2 2.5747E-08 77984 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 144.77 114.2 6068900000 67935000 4956500000 38890000 49232000 49748000 102560000 59753000 54537000 46104000 100970000 109340000 119330000 68426000 83783000 161810000 56781 1441 51038 478336;478337;478338;478339;478340;478341;478342;478343;478344;478345;478346;478347;478348;478349;478350;478351;478352;478353 379640;379641;379642;379643;379644;379645;379646;379647;379648;379649;379650;379651;379652;379653;379654;379655;379656;379657;379658;379659;379660;379661;379662;379663;379664;379665;379666 379658 26 VLIEATK Unmodified 772.46945 0.46945494 2904 Q6NXE6 ARMC6 Armadillo repeat-containing protein 6 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 31.434 27.569 2 0.027727 36238 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.068 27.635 220010000 0 210630000 9385700 0 0 0 0 0 0 0 0 0 0 0 0 56782 2904 51039 478354;478355 379667;379668;379669 379667 3 VLIEGSINSVR Unmodified 1185.6717 0.67173657 1806 P59998 ARPC4 Actin-related protein 2/3 complex subunit 4 yes yes 0 0 0 By MS/MS 10 0 1 1 58.706 59.299 2 0.0053741 66675 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.173 43.486 12216000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12216000 56783 1806 51040 478356 379670;379671 379670 2 VLIEILCTR Unmodified 1115.6373 0.63726532 1100 P20073 ANXA7 Annexin A7 yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 81.175 81.237 2 0.011037 93684 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.419 53.39 40867000 0 0 0 2132500 0 5097700 0 0 2644500 6325000 5764600 6760100 0 0 12142000 56784 1100 51041 478357;478358;478359;478360;478361;478362;478363 379672 379672 1 VLIFSQMTK Oxidation (M) 1081.5842 0.58416712 2451;2201 Q12873;Q14839 CHD3;CHD4 Chromodomain-helicase-DNA-binding protein 3;Chromodomain-helicase-DNA-binding protein 4 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.484 56.609 2 0.0020087 63300 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 91.783 52.946 310980000 0 0 0 22664000 15620000 27768000 19663000 23347000 18183000 35637000 28539000 27415000 42871000 20861000 28414000 56785 2201;2451 51042 478364;478365;478366;478367;478368;478369;478370;478371;478372;478373;478374;478375 379673;379674;379675;379676;379677;379678;379679;379680;379681;379682;379683;379684;379685 379681 3574 13 VLIFSQMTK Unmodified 1065.5893 0.5892525 2451;2201 Q12873;Q14839 CHD3;CHD4 Chromodomain-helicase-DNA-binding protein 3;Chromodomain-helicase-DNA-binding protein 4 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 2 2 1 2 2 2 2 1 1 2 74.225 74.291 2 0.0033355 84643 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 131.03 96.224 344700000 0 0 0 19342000 18887000 33861000 18617000 34963000 27203000 35459000 0 47835000 24165000 22068000 62302000 56786 2201;2451 51042 478376;478377;478378;478379;478380;478381;478382;478383;478384;478385;478386;478387;478388;478389;478390;478391;478392;478393 379686;379687;379688;379689;379690;379691;379692;379693;379694;379695 379689 10 VLIFSQMTR Unmodified 1093.5954 0.59540051 389 O60264;P28370 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 yes no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 75.44 75.478 2 0.022744 87652 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 51.346 12.554 35401000 0 0 0 2414500 2280200 4892000 2521400 2714900 3331000 3589800 0 4715100 2564500 0 6377800 56787 389 51043 478394;478395;478396;478397;478398;478399;478400;478401;478402;478403 379696 379696 1 VLIFSQMVR Unmodified 1091.6161 0.61613595 4814;4517;199;2670;3497 Q9P2D1;Q9HCK8;O14646;Q8TD26;Q3L8U1 CHD7;CHD8;CHD1;CHD6;CHD9 Chromodomain-helicase-DNA-binding protein 7;Chromodomain-helicase-DNA-binding protein 8;Chromodomain-helicase-DNA-binding protein 1;Chromodomain-helicase-DNA-binding protein 6;Chromodomain-helicase-DNA-binding protein 9 no no 0 0 0 By matching By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 81.274 81.425 2 0.036457 94299 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 45.68 24.981 10291000 0 0 0 0 0 0 0 0 4077400 0 3056300 0 3157600 0 0 56788 4814;4517;199;3497;2670 51044 478404;478405;478406;478407 379697;379698 379698 2 VLIGGDETPEGQR Unmodified 1369.6838 0.68375782 425 O60701 UGDH UDP-glucose 6-dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 41.487 41.885 2 0.0027574 45651 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 73.885 54.099 57118000 0 0 0 0 0 0 0 5569500 0 0 12956000 0 8960700 9177900 20453000 56789 425 51045 478408;478409;478410;478411;478412;478413 379699;379700;379701;379702;379703;379704 379702 6 VLIIGGGDGGVLR Unmodified 1224.719 0.71902112 1093 P19623 SRM Spermidine synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 2 1 1 76.341 76.391 2 0.0035394 88714 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 65.347 45.56 161020000 0 0 0 4795700 3770600 7287400 5330000 6476200 0 9061800 18751000 24938000 8039900 18306000 54268000 56790 1093 51046 478414;478415;478416;478417;478418;478419;478420;478421;478422;478423;478424;478425 379705;379706;379707;379708;379709;379710;379711;379712;379713;379714;379715 379714 11 VLIIGSGGR Unmodified 870.5287 0.52870115 1134 P22102 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.79 45.96 2 0.0027653 51548 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 137.18 44.487 407160000 0 0 0 14681000 15189000 45927000 21228000 23242000 15327000 34778000 43007000 41449000 22167000 36330000 93841000 56791 1134 51047 478426;478427;478428;478429;478430;478431;478432;478433;478434;478435;478436;478437 379716;379717;379718;379719;379720;379721;379722 379716 7 VLIKPEIQNNQK Unmodified 1422.8195 0.81946344 4489 Q9HAU0 PLEKHA5 Pleckstrin homology domain-containing family A member 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 39.444 39.383 3 0.019996 43774 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 28.327 9.9144 53895000 0 0 0 6735800 4568400 9252600 8442100 7466600 7450300 9979200 0 0 0 0 0 56792 4489 51048 478438;478439;478440;478441;478442;478443;478444 379723;379724;379725 379723 3 VLIPIHEANR Unmodified 1160.6666 0.66659162 3933 Q96N67 DOCK7 Dedicator of cytokinesis protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 49.89 49.907 3 0.010259 56414 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 48.981 37.817 67523000 0 0 0 7580000 9426800 0 10399000 8906600 0 0 0 16246000 14964000 0 0 56793 3933 51049 478445;478446;478447;478448;478449;478450 379726;379727;379728;379729 379726 4 VLIPIHEANRDAK Unmodified 1474.8256 0.82561145 3933 Q96N67 DOCK7 Dedicator of cytokinesis protein 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 43.053 42.595 3 0.01165 45920 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.005 34.114 96123000 8254900 0 0 3275700 4146400 9564700 5227400 5655300 5818800 8344200 7757700 10444000 8230600 7185200 12218000 56794 3933 51050 478451;478452;478453;478454;478455;478456;478457;478458;478459;478460;478461;478462;478463 379730;379731;379732;379733 379731 4 VLIPMHTAK Unmodified 1008.579 0.57902216 2504 Q15172 PPP2R5A Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform yes yes 0 0 0 By MS/MS 2 0 1 1 52.4 44.385 2 0.028967 61171 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.494 57.356 26691000 26691000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56795 2504 51051 478464 379734 379734 1 VLIPVFALGR Unmodified 1083.6805 0.68045077 2789 Q5TA45 CPSF3L Integrator complex subunit 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 92.118 92.227 2 0.012047 106881 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.166 46.342 11066000 0 0 0 0 603280 1427000 505840 890240 1107100 1127700 758090 1262900 0 706760 2677100 56796 2789 51052 478465;478466;478467;478468;478469;478470;478471;478472;478473;478474 379735;379736;379737 379736 3 VLIQEMDLR Unmodified 1115.6009 0.60087982 3970 Q96RL7 VPS13A Vacuolar protein sorting-associated protein 13A yes yes 0 0 0 By matching By MS/MS By matching By matching By matching 10 0 5 1 1 1 1 1 70.859 71.035 2 0.018109 81703 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 55.112 35.335 9297400 0 0 0 0 0 0 1345500 2878700 963100 0 2906800 0 1203200 0 0 56797 3970 51053 478475;478476;478477;478478;478479 379738 379738 1 VLIQRGYDSDPVK Unmodified 1488.7936 0.79364262 946 P11388 TOP2A DNA topoisomerase 2-alpha yes yes 0 0 1 By MS/MS By matching 2 0 2 1 1 49.961 44.013 3 0.013942 61169 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.746 27.914 26643000 23284000 0 3359700 0 0 0 0 0 0 0 0 0 0 0 0 56798 946 51054 478480;478481 379739 379739 1 VLISDSLDPCCRK Unmodified 1561.7592 0.75924773 304 O43175 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.76 3.87 6 1 10 2 3 2 1 1 1 1 1 1 1 1 1 1 59.479 57.2 2;3 6.674E-08 71489 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 110.08 88.776 1030000000 96952000 436510000 365880000 0 4152200 12887000 7872100 0 9429700 10526000 15573000 13115000 19643000 16629000 20872000 56799 304 51055 478482;478483;478484;478485;478486;478487;478488;478489;478490;478491;478492;478493;478494;478495;478496;478497;478498 379740;379741;379742;379743;379744;379745;379746;379747;379748;379749;379750;379751;379752;379753;379754;379755;379756;379757;379758 379755 18 VLISSLQDCLHGIESK Unmodified 1797.9295 0.92948418 2620 Q16630 CPSF6 Cleavage and polyadenylation specificity factor subunit 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 81.899 79.851 3 2.879E-17 100825 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.45 107.68 130320000 36030000 66204000 0 0 0 0 0 0 2178500 4469100 0 0 0 1618800 19820000 56800 2620 51056 478499;478500;478501;478502;478503;478504 379759;379760;379761;379762 379760 4 VLISTDLTSR Unmodified 1103.6186 0.61863837 4902 Q9UHI6 DDX20 Probable ATP-dependent RNA helicase DDX20 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 59.903 60.144 2 0.018376 68871 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 48.423 23.529 74089000 0 0 0 0 0 8067100 7364700 7813700 4499900 9514900 0 12808000 0 11540000 12480000 56801 4902 51057 478505;478506;478507;478508;478509;478510;478511;478512 379763 379763 1 VLITENDVK Unmodified 1029.5706 0.57062555 3983 Q96S55 WRNIP1 ATPase WRNIP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 14 2 1 2 1 2 1 1 1 1 1 1 40.709 40.875 2 0.0036824 46677 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 95.741 62.003 401860000 0 0 0 57068000 0 22824000 69389000 18414000 46366000 30443000 27101000 28586000 22896000 49635000 29137000 56802 3983 51058 478513;478514;478515;478516;478517;478518;478519;478520;478521;478522;478523;478524;478525;478526 379764;379765;379766;379767;379768;379769;379770 379770 3 VLITSQGYEQICK Unmodified 1537.781 0.78102903 4664 Q9NVC6 MED17 Mediator of RNA polymerase II transcription subunit 17 yes yes 0 0 0 By MS/MS 2 0 1 1 66.46 60.542 2 0.00080865 77479 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.93 87.988 21190000 0 21190000 0 0 0 0 0 0 0 0 0 0 0 0 0 56803 4664 51059 478527 379771 379771 1 VLITTDLLAR Unmodified 1113.6758 0.67575932 1816;2396 P60842;Q14240 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.239 80.299 2 0.00052219 91843 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 126.41 95.338 1903200000 0 0 0 41319000 47776000 233930000 94479000 85683000 64141000 259360000 229280000 184980000 136950000 174450000 350830000 56804 1816;2396 51060 478528;478529;478530;478531;478532;478533;478534;478535;478536;478537;478538;478539 379772;379773;379774;379775;379776;379777;379778;379779;379780;379781;379782;379783 379779 12 VLIYSVQPYTK Unmodified 1309.7282 0.72818882 1693 P52630 STAT2 Signal transducer and activator of transcription 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 70.464 69.751 2 0.00055755 79910 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 81.338 61.551 106340000 41952000 0 0 4549000 4978600 6673600 5408000 5218400 0 8574400 8058000 5995100 6522600 8407800 0 56805 1693 51061 478540;478541;478542;478543;478544;478545;478546;478547;478548;478549;478550 379784;379785;379786;379787;379788;379789;379790;379791;379792;379793;379794 379792 11 VLLAAAVCTK Unmodified 1044.6002 0.60015154 1538 P48444 ARCN1 Coatomer subunit delta yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 63.307 56.771 2 0.010479 76816 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.464 56.429 103700000 96473000 7225400 0 0 0 0 0 0 0 0 0 0 0 0 0 56806 1538 51062 478551;478552 379795;379796;379797 379797 3 VLLAEEGIAPLSSAGPGK Unmodified 1707.9407 0.94070079 2147 Q08050 FOXM1 Forkhead box protein M1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 80.459 79.937 2 2.0492E-37 92549 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 127.71 118.71 159900000 0 34925000 0 5031600 7219100 9363300 10233000 10439000 8512900 13681000 11575000 14107000 9505300 8703000 16604000 56807 2147 51063 478553;478554;478555;478556;478557;478558;478559;478560;478561;478562;478563;478564;478565;478566 379798;379799;379800;379801;379802;379803;379804;379805;379806;379807;379808;379809;379810;379811;379812 379805 15 VLLALHDRAPQLK Unmodified 1472.8827 0.8827324 4846 Q9UBL3 ASH2L Set1/Ash2 histone methyltransferase complex subunit ASH2 yes yes 0 0 1 By MS/MS 10 0 1 1 57.46 58.061 3 0.003054 65311 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.469 28.88 13810000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13810000 56808 4846 51064 478567 379813;379814 379814 2 VLLASSFVPIYAGLK Unmodified 1576.9229 0.92286588 1439 P41247 PNPLA4 Patatin-like phospholipase domain-containing protein 4 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 94.191 94.343 2 0.0073077 109517 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.927 34.901 2776700 0 0 0 0 0 0 0 0 0 729750 641120 0 0 0 1405800 56809 1439 51065 478568;478569;478570 379815 379815 1 VLLATLSIPITPER Unmodified 1521.913 0.91302948 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 90.884 91.023 2 0.00016935 105857 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 81.865 76.551 17990000 0 0 0 0 0 1616600 0 1310700 1171900 2943100 1933100 2046800 0 1745800 5222400 56810 2378 51066 478571;478572;478573;478574;478575;478576;478577;478578 379816;379817;379818;379819;379820;379821;379822 379822 7 VLLATLSIPITPERTDIAR Unmodified 2078.2099 0.20993978 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 1 By MS/MS 10 0 1 1 88.471 88.621 3 0.00051561 102544 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.547 40.722 4056000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4056000 56811 2378 51067 478579 379823;379824 379824 2 VLLDDTQSEAAR Unmodified 1316.6572 0.65720872 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.43 39.61 2 2.8093E-05 42783 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 108.43 75.681 90687000 0 0 0 4205700 5229600 6954100 6150500 6468100 7312900 7557100 9797300 9208800 10028000 6282600 11493000 56812 2446 51068 478580;478581;478582;478583;478584;478585;478586;478587;478588;478589;478590;478591 379825;379826;379827;379828;379829;379830;379831;379832;379833;379834 379828 10 VLLDDTQSEAARVLADNLK Unmodified 2070.0957 0.095697884 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 87.522 83.885 3 0.0029866 101431 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 41.554 36.937 23384000 0 21344000 2039600 0 0 0 0 0 0 0 0 0 0 0 0 56813 2446 51069 478592;478593 379835 379835 1 VLLDFLMEEK Oxidation (M) 1251.6421 0.64207593 4126 Q9BSJ2 TUBGCP2 Gamma-tubulin complex component 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 90.364 85.202 2 0.0039251 108168 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.247 89.247 30994000 12040000 14918000 4035600 0 0 0 0 0 0 0 0 0 0 0 0 56814 4126 51070 478594;478595;478596 379836;379837;379838 379837 5612 3 VLLDFLMEEK Unmodified 1235.6472 0.64716131 4126 Q9BSJ2 TUBGCP2 Gamma-tubulin complex component 2 yes yes 0 0 0 By MS/MS 2 0 1 1 96.581 88.45 2 0.0018332 114308 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 108.98 108.98 8685900 8685900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56815 4126 51070 478597 379839 379839 1 VLLDGVQNPR Unmodified 1109.6193 0.61930707 741 P01024 C3 Complement C3;Complement C3 beta chain;C3-beta-c;Complement C3 alpha chain;C3a anaphylatoxin;Acylation stimulating protein;Complement C3b alpha' chain;Complement C3c alpha' chain fragment 1;Complement C3dg fragment;Complement C3g fragment;Complement C3d fragment;Complement C3f fragment;Complement C3c alpha' chain fragment 2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 49.502 49.276 2 0.0052778 55456 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 69.598 42.468 20417000 0 0 0 7173400 0 0 0 13244000 0 0 0 0 0 0 0 56816 741 51071 478598;478599 379840;379841 379840 2 VLLDGVQNPRAEDLVGK Unmodified 1821.9949 0.99486163 741 P01024 C3 Complement C3;Complement C3 beta chain;C3-beta-c;Complement C3 alpha chain;C3a anaphylatoxin;Acylation stimulating protein;Complement C3b alpha' chain;Complement C3c alpha' chain fragment 1;Complement C3dg fragment;Complement C3g fragment;Complement C3d fragment;Complement C3f fragment;Complement C3c alpha' chain fragment 2 yes yes 0 0 1 By MS/MS 2 0 1 1 73.249 70.164 3 0.00054914 86027 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 60.489 56.318 10381000 0 0 10381000 0 0 0 0 0 0 0 0 0 0 0 0 56817 741 51072 478600 379842;379843 379843 2 VLLDHDVPEDK Unmodified 1278.6456 0.6455814 4710 Q9NWZ5 UCKL1 Uridine-cytidine kinase-like 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 39.838 40.295 3 0.015492 43832 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.109 30.737 54241000 0 0 0 0 0 0 0 6014900 0 0 0 9103700 9590900 8505300 21026000 56818 4710 51073 478601;478602;478603;478604;478605 379844;379845 379844 2 VLLDHGAGINTHSNEFK Unmodified 1850.9275 0.92751034 3250 Q8IWZ3 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 49.737 49.807 4 0.0022093 54594 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.382 27.963 185810000 0 0 0 12935000 6229700 25232000 11200000 20441000 18199000 16889000 0 0 21682000 29515000 23488000 56819 3250 51074 478606;478607;478608;478609;478610;478611;478612;478613;478614;478615 379846;379847 379847 2 VLLDNVENK Unmodified 1042.5659 0.56587452 3702 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 42.062 41.815 2 0.0031541 46864 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 92.439 49.193 519240000 0 13782000 0 26016000 27549000 45272000 28398000 26123000 22887000 54282000 65865000 65186000 38646000 36103000 69126000 56820 3702 51075 478616;478617;478618;478619;478620;478621;478622;478623;478624;478625;478626;478627;478628 379848;379849;379850;379851;379852;379853;379854;379855;379856;379857;379858 379850 8 VLLEAGEGLVTITPTTGSDGRPDAR Unmodified 2524.3133 0.31329523 4737 Q9NY33 DPP3 Dipeptidyl peptidase 3 yes yes 0 0 1 By MS/MS 10 0 1 1 80.702 80.918 3 0.00025028 93318 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.37 21.747 5965600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5965600 56821 4737 51076 478629 379859 379859 1 VLLEEGEAQR Unmodified 1142.5932 0.5931519 948 P11441 UBL4A Ubiquitin-like protein 4A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.148 36.329 2 0.00054294 40156 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 123.98 87.142 489410000 0 0 0 26012000 29426000 36452000 33229000 37696000 24945000 37319000 46824000 58243000 45137000 43172000 70960000 56822 948 51077 478630;478631;478632;478633;478634;478635;478636;478637;478638;478639;478640;478641 379860;379861;379862;379863;379864;379865;379866;379867;379868;379869 379864 8 VLLEELTDPTMR Oxidation (M) 1431.7279 0.72793082 3645 Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A yes yes 0 1 0 By MS/MS 10 0 1 1 77.091 77.293 2 0.0024975 89581 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 59.426 30.718 52580000 0 0 0 0 0 0 0 0 0 0 52580000 0 0 0 0 56823 3645 51078 478642 379870 379870 5164 1 VLLESEQFLTELTR Unmodified 1676.8985 0.89850163 1386 P37108 SRP14 Signal recognition particle 14 kDa protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 91.914 92.078 2 0.0016338 106701 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.632 46.15 8543700 0 0 0 0 0 0 0 614400 0 2275500 1397700 0 0 0 4256100 56824 1386 51079 478643;478644;478645;478646 379871;379872;379873 379872 3 VLLFPPLSSR Unmodified 1127.6703 0.67028001 5176 Q9Y3T6 R3HCC1 R3H and coiled-coil domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 85.76 85.815 2 0.035524 99132 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.448 23.413 28855000 0 0 0 2114800 1901000 2743600 1852300 0 1557800 3051600 3034100 3108600 2125600 2712400 4653500 56825 5176 51080 478647;478648;478649;478650;478651;478652;478653;478654;478655;478656;478657 379874;379875;379876;379877;379878;379879 379876 6 VLLFSQSR Unmodified 948.53927 0.53926584 2097 Q03468 ERCC6 DNA excision repair protein ERCC-6 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 58.173 58.127 2 0.043235 67099 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 49.325 21.219 78087000 0 0 0 10654000 8944900 10695000 8652700 10019000 6439100 13974000 0 0 0 8708900 0 56826 2097 51081 478658;478659;478660;478661;478662;478663;478664;478665 379880 379880 1 VLLFTDDVALVSK Unmodified 1418.8021 0.80208205 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 88.059 88.201 2 0.012516 102325 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 42.001 13.602 10103000 0 0 0 0 0 0 0 0 0 2298100 2796200 0 0 1833800 3174700 56827 3023 51082 478666;478667;478668;478669 379881;379882 379882 2 VLLGEEEALEDDSESRSDVSSSALTASVK Unmodified 3022.4466 0.44661341 1469 P42858 HTT Huntingtin yes yes 0 0 1 By MS/MS 2 0 1 1 81.703 73.573 3 5.678E-09 96371 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.16 56.129 19423000 19423000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56828 1469 51083 478670 379883 379883 1 VLLGETGK Unmodified 815.47527 0.4752686 1888 P62280 RPS11 40S ribosomal protein S11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.4 28.595 2 0.036676 31513 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 89.296 36.996 576110000 0 0 0 33577000 39663000 26329000 36723000 27622000 22275000 53183000 62265000 96207000 69867000 51051000 57353000 56829 1888 51084 478671;478672;478673;478674;478675;478676;478677;478678;478679;478680;478681;478682 379884 379884 0 VLLGQDEPLIHVFAK Unmodified 1677.9454 0.94539224 4136 Q9BT73 PSMG3 Proteasome assembly chaperone 3 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 93.713 87.2 3 0.00019648 110642 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.092 61.251 76420000 19992000 56427000 0 0 0 0 0 0 0 0 0 0 0 0 0 56830 4136 51085 478683;478684 379885;379886 379886 2 VLLHLEEK Unmodified 979.57023 0.57023162 5209 Q9Y4R8 TELO2 Telomere length regulation protein TEL2 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.57 3.96 3 4 1 1 1 1 1 1 1 47.339 44.953 2 0.0045285 64249 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 147.34 84.357 1681200000 29163000 1616100000 14683000 0 0 7346700 2413400 0 0 0 0 0 0 3797200 7688300 56831 5209 51086 478685;478686;478687;478688;478689;478690;478691 379887;379888;379889;379890;379891 379890 4 VLLIESLATMEPDSRPELQEK Oxidation (M) 2413.241 0.24104149 2828 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog yes yes 0 1 1 By MS/MS 10 0 1 1 82.379 82.581 3 1.0722E-11 95226 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.987 48.56 15249000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15249000 56832 2828 51087 478692 379892 379892 4474 1 VLLISDPTTDK Unmodified 1200.6602 0.66016884 1006 P14735 IDE Insulin-degrading enzyme yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 62.616 61.273 2 0.00039155 77676 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.79 79.614 1348500000 55792000 991750000 19044000 90209000 6754900 10595000 7998300 12183000 7146900 11151000 27478000 22626000 11707000 22659000 51394000 56833 1006 51088 478693;478694;478695;478696;478697;478698;478699;478700;478701;478702;478703;478704;478705;478706;478707;478708 379893;379894;379895;379896;379897;379898;379899;379900;379901;379902 379894 9 VLLLPLER Unmodified 951.6117 0.6117025 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.066 82.127 2 0.015415 95038 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 68.915 8.127 113040000 0 0 0 4583000 5128400 9994300 6641200 6125600 5974100 10656000 9907900 10921000 8750800 11559000 22794000 56834 619 51089 478709;478710;478711;478712;478713;478714;478715;478716;478717;478718;478719;478720 379903;379904;379905;379906;379907;379908;379909;379910;379911;379912;379913 379903 11 VLLLSSPGLEELYR Unmodified 1587.8872 0.88720866 3308 Q8N163 CCAR2 Cell cycle and apoptosis regulator protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 89.986 90.094 2 9.2866E-12 104545 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 83 66.368 43909000 0 0 0 0 1581500 2266300 1366500 2496600 2177100 7870800 4297400 3353000 941540 2937500 14621000 56835 3308 51090 478721;478722;478723;478724;478725;478726;478727;478728;478729;478730;478731 379914;379915;379916;379917;379918;379919;379920;379921;379922;379923;379924 379915 11 VLLMELEEAR Unmodified 1201.6377 0.63765925 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.101 79.161 2 0.0015079 91362 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 90.629 50.584 156810000 0 0 0 6093700 4657100 11084000 8044800 6949000 9238900 14401000 19446000 23305000 8986200 10672000 33930000 56836 965 51091 478732;478733;478734;478735;478736;478737;478738;478739;478740;478741;478742;478743 379925;379926;379927;379928;379929;379930;379931;379932;379933;379934;379935 379931 10 VLLNAEDK Unmodified 900.49165 0.49164694 4358 Q9H267 VPS33B Vacuolar protein sorting-associated protein 33B yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 32.411 27.904 2 0.031244 35179 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 75.213 14.453 87863000 0 87863000 0 0 0 0 0 0 0 0 0 0 0 0 0 56837 4358 51092 478744;478745 379936;379937 379937 2 VLLPEYGGTK Unmodified 1075.5914 0.59136099 1853 P61604 HSPE1 10 kDa heat shock protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 6.56 3.86 3 1 5 1 2 1 1 1 1 1 1 58.826 56.519 2 0.0016854 73210 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.71 83.112 2883300000 97944000 2529100000 71135000 0 0 0 0 15269000 0 0 33278000 31509000 0 24742000 80334000 56838 1853 51093 478746;478747;478748;478749;478750;478751;478752;478753;478754 379938;379939;379940;379941;379942;379943;379944;379945;379946;379947 379938 9 VLLPTQK Unmodified 797.50109 0.50108942 3850 Q96GA3 LTV1 Protein LTV1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.341 37.52 2 0.028147 41105 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 76.847 48.36 166240000 0 0 0 8912700 9646400 9017600 9297800 9307400 6883200 14370000 17102000 26676000 16578000 15903000 22542000 56839 3850 51094 478755;478756;478757;478758;478759;478760;478761;478762;478763;478764;478765;478766 379948 379948 1 VLLPVLLNK Unmodified 1007.6743 0.67430276 125 O00186 STXBP3 Syntaxin-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 84.975 85.041 2 0.0052447 98102 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.116 78.324 86071000 0 0 0 3239900 4580900 7382400 6920000 7073500 7532700 8856400 6993000 8249000 6025000 5564400 13654000 56840 125 51095 478767;478768;478769;478770;478771;478772;478773;478774;478775;478776;478777;478778 379949;379950;379951;379952;379953;379954;379955;379956;379957;379958;379959;379960 379952 12 VLLQAFDVVER Unmodified 1287.7187 0.71868677 2572 Q15750 TAB1 TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 83.834 83.968 2 0.0059429 96915 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.726 60.83 51311000 0 0 0 0 0 5587800 4163000 3260800 0 6223400 6145200 5980400 3322300 5466300 11162000 56841 2572 51096 478779;478780;478781;478782;478783;478784;478785;478786;478787 379961;379962;379963;379964;379965;379966;379967;379968;379969 379965 9 VLLQEEGTR Unmodified 1043.5611 0.56112349 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 32.472 32.635 2 0.0036398 35587 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 110.31 78.374 247930000 0 0 0 0 0 0 0 247930000 0 0 0 0 0 0 0 56842 1029 51097 478788;478789;478790 379970;379971;379972 379971 3 VLLQEEGTRK Unmodified 1171.6561 0.65608651 1029 P15924 DSP Desmoplakin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 22.374 22.579 2;3 0.00049697 23474 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 81.525 54.478 800690000 0 0 0 146470000 28944000 65139000 31096000 46309000 49473000 60767000 70145000 92547000 84952000 55292000 69562000 56843 1029 51098 478791;478792;478793;478794;478795;478796;478797;478798;478799;478800;478801;478802;478803;478804;478805;478806;478807;478808;478809;478810;478811;478812;478813;478814 379973;379974;379975;379976;379977;379978;379979;379980;379981;379982;379983;379984;379985;379986;379987;379988;379989 379984 13 VLLQGKGDSEHK Unmodified 1309.699 0.69901396 1356 P35579 MYH9 Myosin-9 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.328 11.469 3 0.013082 9505 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.564 28.699 82400000 0 0 0 8683100 5821600 842410 8824300 3931500 0 6176200 4774600 22066000 11370000 4039400 5871700 56844 1356 51099 478815;478816;478817;478818;478819;478820;478821;478822;478823;478824;478825 379990;379991 379990 1 VLLQHVHEGYEK Unmodified 1450.7569 0.75686319 5212 Q9Y4X5 ARIH1 E3 ubiquitin-protein ligase ARIH1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 2 1 2 32.631 32.914 2;3 0.0010396 34355 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.267 48.601 212810000 0 0 0 13158000 0 21268000 13735000 12885000 9569400 14746000 20272000 28891000 20901000 21572000 35819000 56845 5212 51100 478826;478827;478828;478829;478830;478831;478832;478833;478834;478835;478836;478837;478838 379992;379993;379994;379995;379996;379997;379998;379999;380000 379994 8 VLLQPQVLCDK Unmodified 1311.7221 0.72205759 2823 Q5VW36 FOCAD Focadhesin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 71.479 70.933 2 0.00029326 81845 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 107.15 66.125 209570000 0 143620000 0 5216600 5957500 8749700 5722200 5377900 3759400 6825800 6787400 6362300 2793300 3439400 4960400 56846 2823 51101 478839;478840;478841;478842;478843;478844;478845;478846;478847;478848;478849;478850;478851;478852 380001;380002;380003;380004;380005;380006;380007;380008;380009;380010;380011;380012 380012 12 VLLQTTPPHVIGQLDK Unmodified 1758.004 0.003969751 2907 Q6NXT4 SLC30A6 Zinc transporter 6 yes yes 0 0 0 By MS/MS 2 0 1 1 81.34 73.21 3 0.002156 95982 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 44.734 33.261 12941000 12941000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56847 2907 51102 478853 380013 380013 1 VLLSALER Unmodified 899.54402 0.54401687 953 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 63.253 63.403 2 0.00017204 72312 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 154.35 81.311 660770000 0 0 0 31794000 0 54227000 58687000 51557000 42465000 69719000 55248000 71660000 41535000 64617000 119260000 56848 953 51103 478854;478855;478856;478857;478858;478859;478860;478861;478862;478863;478864 380014;380015;380016;380017;380018;380019;380020;380021;380022;380023;380024;380025;380026 380019 11 VLLSDSNLHDA Unmodified 1182.5881 0.58806652 2875 Q6FI81 CIAPIN1 Anamorsin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 3 1 1 1 1 1 1 1 1 1 1 53.255 51.974 2 0.00042561 57790 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.731 72.941 2252800000 57024000 1648900000 0 0 17534000 74547000 32644000 0 37688000 57339000 67570000 61411000 38295000 45203000 114680000 56849 2875 51104 478865;478866;478867;478868;478869;478870;478871;478872;478873;478874;478875;478876;478877;478878 380027;380028;380029;380030;380031;380032;380033;380034;380035;380036;380037;380038;380039;380040;380041;380042 380032 16 VLLSPDYLPAMR Unmodified 1373.7377 0.73770765 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 84.44 84.569 2 3.0338E-08 97110 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 130.96 113.53 53048000 0 0 0 0 0 5450800 0 5848100 0 6634600 4985600 4843200 2642800 5257700 17385000 56850 3119 51105 478879;478880;478881;478882;478883;478884;478885;478886 380043;380044;380045;380046;380047;380048;380049;380050 380048 8 VLLSPDYLPAMR Oxidation (M) 1389.7326 0.73262227 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.874 76.97 2 0.00013898 88658 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 84.213 74.78 113820000 0 0 0 4979200 0 11449000 8560000 7247700 4786900 12760000 9612400 15774000 8936000 12002000 17710000 56851 3119 51105 478887;478888;478889;478890;478891;478892;478893;478894;478895;478896;478897 380051;380052;380053;380054;380055;380056;380057;380058;380059;380060 380056 4738 9 VLLSPSIPSVGQDQTLSPGSK Unmodified 2109.1317 0.13174904 2333 Q13625 TP53BP2 Apoptosis-stimulating of p53 protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 2 2 2 2 1 2 2 2 2 81.146 81.195 2;3 6.172E-28 93915 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 133.16 102.61 152860000 0 0 0 6901500 12014000 16978000 11648000 9186300 12782000 9557200 18125000 0 12539000 14162000 28966000 56852 2333 51106 478898;478899;478900;478901;478902;478903;478904;478905;478906;478907;478908;478909;478910;478911;478912;478913;478914;478915;478916;478917;478918 380061;380062;380063;380064;380065;380066;380067;380068;380069;380070;380071;380072;380073;380074;380075;380076;380077;380078 380061 17 VLLTEENK Unmodified 944.51786 0.51786169 2809 Q5VT25 CDC42BPA Serine/threonine-protein kinase MRCK alpha yes yes 0 0 0 By MS/MS 10 0 1 1 27.005 27.686 2 0.029462 28571 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.122 5.2668 35801000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35801000 56853 2809 51107 478919 380079 380079 1 VLLTMIAR Oxidation (M) 931.55247 0.55247306 492 O75396 SEC22B Vesicle-trafficking protein SEC22b yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 2 2 1 2 2 1 2 1 2 2 58.498 58.59 2 0.0084874 66319 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.616 37.431 208420000 0 0 0 16012000 15504000 17638000 22532000 7845800 18660000 9825300 9717700 41304000 8658800 16239000 24481000 56854 492 51108 478920;478921;478922;478923;478924;478925;478926;478927;478928;478929;478930;478931;478932;478933;478934;478935;478936;478937;478938;478939;478940 380080;380081;380082;380083;380084;380085;380086;380087;380088 380087 639 9 VLLTMIAR Unmodified 915.55756 0.55755844 492 O75396 SEC22B Vesicle-trafficking protein SEC22b yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 73.591 73.714 2 0.011784 85254 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 76.134 57.444 154510000 0 0 0 0 6709300 13679000 7883800 13362000 9837800 16774000 15100000 21990000 9601400 13529000 26045000 56855 492 51108 478941;478942;478943;478944;478945;478946;478947;478948;478949;478950;478951 380089;380090;380091;380092;380093;380094;380095;380096;380097 380095 9 VLLTSDK Unmodified 774.44872 0.4487195 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 23.155 23.299 2 0.03326 24773 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 72.138 2.7062 193650000 0 0 0 14842000 15235000 0 16913000 22145000 13527000 22987000 0 0 31883000 26641000 29481000 56856 19 51109 478952;478953;478954;478955;478956;478957;478958;478959;478960 380098;380099 380099 2 VLLTTQGVDMISK Oxidation (M) 1419.7643 0.76431633 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 63.908 63.99 2 2.5018E-08 73311 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 105.52 94.303 365760000 0 0 0 24521000 18826000 35987000 37663000 26535000 30787000 32755000 32856000 51971000 34572000 0 39282000 56857 2392 51110 478961;478962;478963;478964;478965;478966;478967;478968;478969;478970;478971 380100;380101;380102;380103;380104;380105;380106;380107;380108;380109;380110;380111 380105 3922 11 VLLTTQGVDMISK Unmodified 1403.7694 0.76940171 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.715 75.776 2 2.1324E-51 86443 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 182.64 168.43 452740000 0 0 0 15582000 26356000 42252000 25316000 35452000 22889000 43689000 47747000 54368000 29812000 37297000 71983000 56858 2392 51110 478972;478973;478974;478975;478976;478977;478978;478979;478980;478981;478982;478983 380112;380113;380114;380115;380116;380117;380118;380119;380120;380121;380122;380123;380124 380120 13 VLLVLPK Unmodified 780.54731 0.54731133 451 O75044 SRGAP2 SLIT-ROBO Rho GTPase-activating protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 74.479 73.392 2 0.02563 84376 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 80.377 43.79 70973000 24545000 0 0 0 4534000 7170700 0 0 0 9779900 0 9433500 0 5240800 10269000 56859 451 51111 478984;478985;478986;478987;478988;478989;478990 380125;380126;380127;380128;380129;380130;380131 380130 7 VLLVPGPEK Unmodified 950.58007 0.58006802 4019 Q99536 VAT1 Synaptic vesicle membrane protein VAT-1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.42 3.66 3 1 8 1 2 1 1 1 1 1 1 1 1 1 59.173 56.883 2 0.0026386 70872 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 117.04 103.26 1653500000 63476000 1222600000 62739000 43367000 31463000 0 39615000 44535000 0 0 0 91223000 0 54411000 0 56860 4019 51112 478991;478992;478993;478994;478995;478996;478997;478998;478999;479000;479001;479002 380132;380133;380134;380135;380136;380137;380138;380139;380140;380141;380142;380143;380144;380145;380146;380147 380143 16 VLLVQFK Unmodified 845.53747 0.53747492 2938 Q6P5Z2 PKN3 Serine/threonine-protein kinase N3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.709 71.783 2 0.023833 82218 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 84.025 43.339 83643000 0 0 0 4266600 5665200 8288400 6540500 7425800 6460000 8728200 5799300 10035000 6249800 5187900 8996700 56861 2938 51113 479003;479004;479005;479006;479007;479008;479009;479010;479011;479012;479013;479014 380148;380149;380150;380151;380152;380153;380154;380155;380156;380157;380158;380159 380152 12 VLMENEK Oxidation (M) 877.42152 0.42151847 1637 P50750 CDK9 Cyclin-dependent kinase 9 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 7.5614 7.687 2 0.025786 6104 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 69.176 16.493 34735000 0 0 0 0 2402500 0 3350800 0 3922700 7124700 0 6502000 6128500 5303700 0 56862 1637 51114 479015;479016;479017;479018;479019;479020;479021 380160;380161;380162 380162 3 VLMENEK Unmodified 861.4266 0.42660385 1637 P50750 CDK9 Cyclin-dependent kinase 9 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 20.645 16.447 2 0.013291 21383 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.79 77.817 133270000 4990900 128280000 0 0 0 0 0 0 0 0 0 0 0 0 0 56863 1637 51114 479022;479023 380163 380163 1 VLMFPATLTPSTSSQEK Oxidation (M) 1851.9288 0.92881548 2973 Q6ULP2 AFTPH Aftiphilin yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 78.941 79.048 2 1.5691E-07 91400 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 84.289 70.131 44715000 0 0 0 0 2656900 0 4953000 4017700 0 4308700 5250900 7972400 3925600 4606800 7022700 56864 2973 51115 479024;479025;479026;479027;479028;479029;479030;479031;479032 380164;380165;380166;380167 380164 4592 4 VLMINDTTTDHTFRK Oxidation (M) 1806.8934 0.89343302 5324 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 2 1 1 1 1 1 1 34.158 34.294 3 0.0016708 37570 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 40.552 22.752 + 3520300000 0 0 0 207950000 204710000 459880000 170850000 336650000 376250000 289670000 440390000 501400000 280530000 251980000 0 56865 5324 51116 479033;479034;479035;479036;479037;479038;479039;479040;479041;479042;479043;479044 380168 380168 6720 1 VLMLTLQNDPPSLETGVQDK Oxidation (M) 2213.1249 0.1249491 684 O95747 OXSR1 Serine/threonine-protein kinase OSR1 yes yes 0 1 0 By MS/MS 2.33 0.471 2 1 3 85.018 80.752 2;3 1.2375E-06 96723 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 70.963 63.418 86573000 0 86573000 0 0 0 0 0 0 0 0 0 0 0 0 0 56866 684 51117 479045;479046;479047 380169;380170 380170 826 2 VLMLTLQNDPPSLETGVQDK Unmodified 2197.13 0.13003448 684 O95747 OXSR1 Serine/threonine-protein kinase OSR1 yes yes 0 0 0 By MS/MS By matching 2.33 0.471 2 1 2 1 88.264 84.757 3 1.5406E-13 105351 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.592 56.969 50501000 0 49449000 1051800 0 0 0 0 0 0 0 0 0 0 0 0 56867 684 51117 479048;479049;479050 380171;380172;380173 380171 3 VLMTQQPRPVL Unmodified 1280.7275 0.72747731 4548 Q9NPE3 NOP10 H/ACA ribonucleoprotein complex subunit 3 yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 67.982 67.232 2 3.2629E-17 89326 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 179.68 161.45 193320000 51969000 0 4091500 0 6823400 8999800 7764400 8855300 6802600 13963000 16228000 14280000 11579000 13507000 28457000 56868 4548 51118 479051;479052;479053;479054;479055;479056;479057;479058;479059;479060;479061;479062;479063 380174;380175;380176;380177;380178;380179 380177 6 VLMTQQPRPVL Oxidation (M) 1296.7224 0.72239194 4548 Q9NPE3 NOP10 H/ACA ribonucleoprotein complex subunit 3 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56.613 55.711 2 0.0020966 62838 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 111.06 101.35 219430000 25773000 16734000 0 9646800 12168000 9816800 17528000 10747000 11688000 18258000 16339000 21157000 13217000 14915000 21442000 56869 4548 51118 479064;479065;479066;479067;479068;479069;479070;479071;479072;479073;479074;479075;479076;479077 380180;380181;380182;380183;380184;380185;380186;380187;380188 380185 5961 5 VLNCDTISQVK Unmodified 1275.6493 0.64928657 243 O15031 PLXNB2 Plexin-B2 yes yes 0 0 0 By MS/MS 2 0 1 1 49.632 43.925 2 0.004647 57212 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.489 48.415 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56870 243 51119 479078 380189 380189 1 VLNECLSVQENNKANK Unmodified 1858.9207 0.92071041 20 A6H8Y1 BDP1 Transcription factor TFIIIB component B'' homolog yes yes 0 0 1 By MS/MS 10 0 1 1 67.165 67.308 3 0.042267 76993 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 16.182 0 12300000 0 0 0 0 0 0 12300000 0 0 0 0 0 0 0 0 56871 20 51120 479079 380190 380190 1 VLNEDELPSVRPEEEGEK Unmodified 2067.996 0.99604342 4517 Q9HCK8 CHD8 Chromodomain-helicase-DNA-binding protein 8 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.951 59.062 3 9.6951E-08 67238 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 81.428 72.933 175180000 0 0 0 11790000 10187000 14160000 10067000 13039000 10024000 16049000 22027000 18360000 12291000 17580000 19611000 56872 4517 51121 479080;479081;479082;479083;479084;479085;479086;479087;479088;479089;479090;479091 380191;380192;380193;380194;380195;380196;380197;380198;380199;380200;380201;380202;380203;380204 380191 14 VLNEECDQNWYK Unmodified 1596.6879 0.68785692 1934 P62993 GRB2 Growth factor receptor-bound protein 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 52.608 52.726 2 0.00022841 59333 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 83.883 73.296 41076000 0 0 0 0 1585700 0 2830900 3214300 2367300 7874500 13131000 0 3862300 6209900 0 56873 1934 51122 479092;479093;479094;479095;479096;479097;479098;479099 380205;380206;380207 380206 3 VLNELYSVMK Unmodified 1194.6318 0.63184559 451 O75044;P0DMP2;P0DJJ0 SRGAP2;SRGAP2B;SRGAP2C SLIT-ROBO Rho GTPase-activating protein 2;SLIT-ROBO Rho GTPase-activating protein 2B;SLIT-ROBO Rho GTPase-activating protein 2C yes no 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 80.776 77.137 2 0.0025042 95977 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.05 55.765 35308000 0 32707000 2600700 0 0 0 0 0 0 0 0 0 0 0 0 56874 451 51123 479100;479101 380208 380208 1 VLNEQLQSK Unmodified 1057.5768 0.57677356 4422 Q9H6S1 AZI2 5-azacytidine-induced protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 28.572 24.225 2 0.02514 31813 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.747 8.165 10563000 0 10563000 0 0 0 0 0 0 0 0 0 0 0 0 0 56875 4422 51124 479102 380209 380209 1 VLNFEQAIK Unmodified 1060.5917 0.59169534 2831 Q5VZE5 NAA35 N-alpha-acetyltransferase 35, NatC auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 68.86 69.201 2 0.0034522 79288 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 94.302 74.815 291190000 0 0 0 0 0 0 0 0 0 0 118230000 172960000 0 0 0 56876 2831 51125 479103;479104 380210;380211 380210 2 VLNGNQQVVDTSLK Unmodified 1513.81 0.81002097 3091 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 55.158 49.352 2 0.0016459 63884 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.821 57.722 10187000 0 10187000 0 0 0 0 0 0 0 0 0 0 0 0 0 56877 3091 51126 479105 380212 380212 1 VLNGYSLQHK Unmodified 1157.6193 0.61930707 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 2 1 1 32.798 33.077 2;3 0.015579 35823 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 78.149 42.655 86711000 0 0 0 0 901700 0 1195300 0 0 0 0 33534000 24068000 0 27012000 56878 2451 51127 479106;479107;479108;479109;479110;479111 380213;380214;380215 380215 2 VLNLWQK Unmodified 899.52289 0.52288749 5050;621 O95104;Q9UPN6 SCAF4;SCAF8 Splicing factor, arginine/serine-rich 15;Protein SCAF8 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 1 1 2 62.308 62.446 2 0.016413 72021 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 116 59.972 338870000 0 0 0 13582000 13238000 21074000 23057000 26780000 20462000 25685000 30096000 38061000 25190000 22961000 78682000 56879 621;5050 51128 479112;479113;479114;479115;479116;479117;479118;479119;479120;479121;479122;479123;479124 380216;380217;380218;380219;380220;380221;380222;380223;380224;380225;380226;380227;380228;380229;380230 380223 15 VLNMMPEEK Oxidation (M) 1105.5148 0.51476693 4109 Q9BRJ7 NUDT16L1 Protein syndesmos yes yes 0 1 0 By MS/MS 2 0 1 1 35.711 30.864 2 0.016869 40440 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.478 55.923 9301300 0 9301300 0 0 0 0 0 0 0 0 0 0 0 0 0 56880 4109 51129 479125 380231 380231 5606 1 VLNNMEIGTSLFDEEGAK Oxidation (M) 1981.9303 0.93027204 733 P00558 PGK1 Phosphoglycerate kinase 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.06 3.76 1 14 6 12 4 13 4 1 1 1 1 1 1 1 1 1 1 1 1 81.191 79.47 2;3 0 95265 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 299.04 262.35 10514000000 462630000 8813900000 256940000 14737000 12797000 11223000 14720000 15157000 10508000 22256000 162300000 160470000 12533000 130780000 413240000 56881 733 51130 479126;479127;479128;479129;479130;479131;479132;479133;479134;479135;479136;479137;479138;479139;479140;479141;479142;479143;479144;479145;479146;479147;479148;479149;479150;479151;479152;479153;479154;479155;479156;479157;479158 380232;380233;380234;380235;380236;380237;380238;380239;380240;380241;380242;380243;380244;380245;380246;380247;380248;380249;380250;380251;380252;380253;380254;380255;380256;380257;380258;380259;380260;380261;380262;380263;380264;380265;380266;380267 380234 892 34 VLNNMEIGTSLFDEEGAK Unmodified 1965.9354 0.93535742 733 P00558 PGK1 Phosphoglycerate kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 5.05 3.79 10 2 7 2 8 2 1 1 2 1 2 86.604 83.812 2;3 3.3465E-146 97841 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 211.06 188.18 16873000000 603070000 15753000000 178750000 0 0 0 0 3328100 0 0 32103000 34236000 0 22845000 245780000 56882 733 51130 479159;479160;479161;479162;479163;479164;479165;479166;479167;479168;479169;479170;479171;479172;479173;479174;479175;479176;479177 380268;380269;380270;380271;380272;380273;380274;380275;380276;380277;380278;380279;380280;380281;380282;380283;380284;380285;380286;380287;380288;380289;380290;380291 380287 22 VLNPDLVK Unmodified 896.53312 0.53311783 917 P10244 MYBL2 Myb-related protein B yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.376 47.539 2 0.043235 53828 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 49.325 19.949 62801000 0 0 0 4282300 3708000 5193400 4015500 4042700 2470800 5975300 8152600 8596000 5460200 3944800 6958800 56883 917 51131 479178;479179;479180;479181;479182;479183;479184;479185;479186;479187;479188;479189 380292 380292 1 VLNPPAPAGDHARLDGLSK Unmodified 1927.0276 0.02755874 1026 P15822 HIVEP1 Zinc finger protein 40 yes yes 0 0 1 By MS/MS 2 0 1 1 62.854 54.586 4 0.026254 73745 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 30.094 13.429 10501000 10501000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56884 1026 51132 479190 380293 380293 1 VLNPPGGK Unmodified 780.44939 0.4493882 4460 Q9H910 HN1L Hematological and neurological expressed 1-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 6.56 3.86 3 1 5 1 2 1 1 1 1 1 1 19.033 17.589 2 0.019461 23128 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.866 36.747 665020000 47182000 555440000 16681000 0 0 0 0 1303200 0 0 8416000 11799000 0 6982000 17211000 56885 4460 51133 479191;479192;479193;479194;479195;479196;479197;479198;479199 380294;380295;380296;380297;380298;380299 380297 6 VLNQELR Unmodified 870.49232 0.49231565 795 P05090 APOD Apolipoprotein D yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 25.901 26.101 2 0.018785 27935 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 111.28 44.285 331980000 0 0 0 77637000 8501100 8797200 8729600 28757000 5851600 65758000 14477000 40708000 32755000 16097000 23913000 56886 795 51134 479200;479201;479202;479203;479204;479205;479206;479207;479208;479209;479210;479211 380300 380300 1 VLNQPQSLLVETVVVAR Unmodified 1864.0782 0.078197327 3703 Q93015 NAT6 N-acetyltransferase 6 yes yes 0 0 0 By MS/MS By MS/MS 10 0 3 2 1 88.957 89.153 2;3 0.0040324 103363 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 45.257 39.651 6624200 0 0 0 0 0 0 0 5156400 1467800 0 0 0 0 0 0 56887 3703 51135 479212;479213;479214 380301;380302 380301 1 VLNSLDK Unmodified 787.44397 0.44396847 3076 Q7Z2Z2 EFTUD1 Elongation factor Tu GTP-binding domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 24.695 21.113 2 0.025219 27800 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.74 19.361 115630000 0 112870000 2760900 0 0 0 0 0 0 0 0 0 0 0 0 56888 3076 51136 479215;479216 380303 380303 1 VLNSLTQQEK Unmodified 1158.6245 0.62445203 3615 Q92538 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 35.119 31.336 2 9.1758E-06 43365 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 147.51 113.71 358990000 11528000 329200000 0 0 0 18261000 0 0 0 0 0 0 0 0 0 56889 3615 51137 479217;479218;479219 380304;380305;380306 380306 3 VLNSYWVGEDSTYK Unmodified 1659.7781 0.77805214 1845 P61313 RPL15 60S ribosomal protein L15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 70.161 70.299 2 1.9571E-14 80602 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 142.08 109.56 173630000 0 0 0 6041400 0 0 10615000 15240000 10491000 16918000 18993000 32982000 17011000 13303000 32034000 56890 1845 51138 479220;479221;479222;479223;479224;479225;479226;479227;479228;479229 380307;380308;380309;380310;380311;380312;380313;380314;380315;380316 380315 10 VLNTGSDVEEAVADALK Unmodified 1729.8734 0.87340909 456 O75122 CLASP2 CLIP-associating protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 86.551 86.687 2 5.6907E-37 100467 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 133.71 116.69 18876000 0 0 0 0 0 0 0 0 0 6171500 5661400 4323400 0 2719500 0 56891 456 51139 479230;479231;479232;479233;479234;479235;479236 380317;380318;380319;380320;380321;380322;380323 380317 7 VLNTNIDGR Unmodified 1000.5302 0.53015772 1885 P62269 RPS18 40S ribosomal protein S18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 1 1 2 2 1 1 1 2 1 1 31.64 31.831 2 7.4724E-06 34511 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 155.75 90.977 1637900000 0 0 0 77445000 95899000 96590000 80798000 85911000 59217000 143610000 168500000 290460000 176160000 148170000 215190000 56892 1885 51140 479237;479238;479239;479240;479241;479242;479243;479244;479245;479246;479247;479248;479249;479250;479251 380324;380325;380326;380327;380328;380329;380330;380331;380332;380333;380334;380335;380336;380337;380338 380330 11 VLNTNIDGRR Unmodified 1156.6313 0.63126874 1885 P62269 RPS18 40S ribosomal protein S18 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 24.428 24.555 3 0.0469 26452 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 22.028 11.122 297110000 0 0 0 24869000 33522000 20035000 20117000 21756000 18350000 27020000 0 0 42297000 40493000 48646000 56893 1885 51141 479252;479253;479254;479255;479256;479257;479258;479259;479260;479261 380339 380339 1 VLNTSLK Unmodified 773.4647 0.46470391 2627 Q16666 IFI16 Gamma-interferon-inducible protein 16 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 29.38 25.63 2 0.019598 33799 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.02 25.396 147340000 0 138080000 9255700 0 0 0 0 0 0 0 0 0 0 0 0 56894 2627 51142 479262;479263 380340;380341 380340 2 VLNYAPGPLDTDMQQLAR Oxidation (M) 2016.9939 0.99387535 1352 P35270 SPR Sepiapterin reductase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 18 2 2 2 1 2 2 2 1 1 1 2 74.118 74.222 2;3 5.812E-15 85074 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 92.856 83.806 431610000 0 0 0 0 28523000 32524000 36619000 17335000 36071000 63157000 60844000 50355000 29191000 27569000 49424000 56895 1352 51143 479264;479265;479266;479267;479268;479269;479270;479271;479272;479273;479274;479275;479276;479277;479278;479279;479280;479281 380342;380343;380344;380345;380346;380347;380348;380349;380350;380351;380352;380353;380354 380347 2056 10 VLNYAPGPLDTDMQQLAR Unmodified 2000.999 0.99896073 1352 P35270 SPR Sepiapterin reductase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 2 2 83.468 83.577 2;3 3.1225E-15 96454 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.197 85.54 93616000 0 0 0 0 2457000 4316200 0 7322600 4737700 6556300 5673000 8807500 0 16952000 36793000 56896 1352 51143 479282;479283;479284;479285;479286;479287;479288;479289;479290;479291;479292 380355;380356;380357;380358;380359;380360;380361;380362;380363;380364 380359 9 VLPADSHEHASGR Unmodified 1374.664 0.66402543 3736 Q96AD5 PNPLA2 Patatin-like phospholipase domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 9.4051 9.5153 3 0.0017229 7851 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 54.524 47.069 36273000 0 0 0 2243800 3157700 4425500 0 4135600 1217600 2897000 0 8693200 4773100 0 4729300 56897 3736 51144 479293;479294;479295;479296;479297;479298;479299;479300;479301 380365;380366;380367;380368;380369;380370 380370 5 VLPALLPS Unmodified 808.50584 0.50584045 1042 P16930 FAH Fumarylacetoacetase yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.17 4.02 1 1 4 1 1 1 1 1 1 88.012 88.107 2 0.018905 101787 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.839 84.595 169770000 38379000 112600000 0 1390300 0 0 0 0 0 0 4557000 0 0 3370800 9468100 56898 1042 51145 479302;479303;479304;479305;479306;479307 380371;380372;380373 380371 3 VLPASLVISDDYQTENK Unmodified 1890.9575 0.95747307 2905 Q6NXR4 TTI2 TELO2-interacting protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 79.502 79.649 2 0.0010162 91900 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 56.225 47.92 22114000 0 0 0 0 0 0 2653100 3398500 2118300 0 0 7133000 2892700 3918300 0 56899 2905 51146 479308;479309;479310;479311;479312;479313 380374;380375 380374 2 VLPAVVDIEK Unmodified 1081.6383 0.63831118 2859 Q68DQ2 CRYBG3 Very large A-kinase anchor protein yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 76.692 72.526 2 0.039938 90461 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 55.064 35.549 73536000 0 73536000 0 0 0 0 0 0 0 0 0 0 0 0 0 56900 2859 51147 479314;479315 380376 380376 1 VLPEGVGPGDIK Unmodified 1179.6499 0.6499385 1142 P22670 RFX1 MHC class II regulatory factor RFX1 yes yes 0 0 0 By MS/MS 10 0 1 1 59.384 59.533 2 0.040593 67662 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 34.755 18.611 13227000 0 0 0 0 0 0 0 0 0 13227000 0 0 0 0 0 56901 1142 51148 479316 380377 380377 1 VLPGDHEYPK Unmodified 1153.5768 0.57677356 3079 Q7Z392 TRAPPC11 Trafficking protein particle complex subunit 11 yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 32.664 28.725 3 0.012875 37830 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 43.77 34.412 49307000 0 36443000 12864000 0 0 0 0 0 0 0 0 0 0 0 0 56902 3079 51149 479317;479318 380378 380378 1 VLPGHSVPLFK Unmodified 1192.6968 0.69682911 3621 Q92547 TOPBP1 DNA topoisomerase 2-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.795 62.891 3 0.001707 70925 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.56 59.672 154480000 0 0 0 7301200 8280200 13224000 13344000 12208000 11097000 14198000 11488000 13614000 13565000 15114000 21049000 56903 3621 51150 479319;479320;479321;479322;479323;479324;479325;479326;479327;479328;479329;479330 380379;380380;380381;380382;380383;380384;380385;380386;380387;380388;380389 380383 11 VLPGMHHPIQMK Unmodified 1386.7264 0.72643146 3677 Q92879 CELF1 CUGBP Elav-like family member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 42.194 42.569 3 0.00356 46400 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.971 41.391 92493000 0 0 0 0 0 9428800 0 14234000 0 5852500 0 13470000 0 0 49507000 56904 3677 51151 479331;479332;479333;479334;479335 380390 380390 1 VLPGPIAPESSK Unmodified 1193.6656 0.66558856 4517 Q9HCK8 CHD8 Chromodomain-helicase-DNA-binding protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 51.56 51.639 2 0.011039 58072 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 50.13 41.385 215630000 0 0 0 20330000 16194000 21620000 16802000 15922000 15120000 27408000 29966000 31142000 0 21128000 0 56905 4517 51152 479336;479337;479338;479339;479340;479341;479342;479343;479344;479345 380391;380392;380393;380394;380395;380396 380393 5 VLPGVDALSNI Unmodified 1096.6128 0.61282471 733 P00558 PGK1 Phosphoglycerate kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.77 3.94 1 10 3 12 3 8 3 1 1 1 1 1 1 1 1 1 1 1 1 90.063 88.48 1;2 7.4066E-08 108274 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 146.23 97.476 33635000000 4711000000 27090000000 308860000 9312000 12968000 13847000 15563000 14191000 12030000 27766000 217460000 185720000 12105000 169960000 834980000 56906 733 51153 479346;479347;479348;479349;479350;479351;479352;479353;479354;479355;479356;479357;479358;479359;479360;479361;479362;479363;479364;479365;479366;479367;479368;479369;479370;479371 380397;380398;380399;380400;380401;380402;380403;380404;380405;380406;380407;380408;380409;380410;380411;380412;380413;380414;380415;380416;380417 380403 17 VLPIKPADVEEPAVPQTPR Unmodified 2055.1364 0.13644049 3823 Q96EV2 RBM33 RNA-binding protein 33 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 73.078 73.125 3 0.013901 84295 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 28.505 21.905 361060000 0 0 0 22748000 37504000 20574000 31128000 31947000 25130000 36297000 0 48055000 32473000 34090000 41112000 56907 3823 51154 479372;479373;479374;479375;479376;479377;479378;479379;479380;479381;479382 380418;380419;380420 380420 3 VLPIMFPALYR Oxidation (M) 1334.7421 0.74206475 2442 Q14738 PPP2R5D Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 91.431 91.554 2 0.017833 106105 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.002 31.089 6038900 0 0 0 0 0 1563000 0 624180 0 0 0 0 0 0 3851700 56908 2442 51155 479383;479384;479385 380421 380421 4010 1 VLPIQDNVSK Unmodified 1111.6237 0.62372375 4616 Q9NRY5 FAM114A2 Protein FAM114A2 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.103 46.272 2 0.0042378 51423 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.573 50.993 629400000 0 0 0 37435000 34030000 40215000 46826000 64033000 34824000 53358000 67397000 69142000 75258000 41197000 65685000 56909 4616 51156 479386;479387;479388;479389;479390;479391;479392;479393;479394;479395;479396;479397 380422;380423;380424;380425;380426;380427;380428;380429;380430 380429 8 VLPLEALVTDAGEVTEAGK Unmodified 1911.0201 0.020073325 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.43 3.65 5 2 14 1 5 1 1 1 2 1 2 2 1 2 2 97.388 95.985 2;3 1.3154E-19 117197 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 149.32 141.02 1456800000 62634000 1305900000 39182000 0 0 603410 488730 2153600 602580 16745000 8462300 1297800 0 3150200 15563000 56910 3641 51157 479398;479399;479400;479401;479402;479403;479404;479405;479406;479407;479408;479409;479410;479411;479412;479413;479414;479415;479416;479417;479418 380431;380432;380433;380434;380435;380436;380437;380438;380439;380440;380441;380442;380443;380444;380445;380446;380447;380448;380449;380450;380451;380452;380453 380438 22 VLPLTTPLVDGEDESSSGASVVAIDNK Unmodified 2712.3705 0.37053534 2565 Q15714 TSC22D1 TSC22 domain family protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 90.288 86.235 3 1.8978E-39 103242 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 76.198 68.665 53873000 0 53873000 0 0 0 0 0 0 0 0 0 0 0 0 0 56911 2565 51158 479419;479420 380454;380455 380455 2 VLPMNTGVEAGETACK Oxidation (M) 1691.7859 0.78585641 777 P04181 OAT Ornithine aminotransferase, mitochondrial;Ornithine aminotransferase, hepatic form;Ornithine aminotransferase, renal form yes yes 0 1 0 By MS/MS 2 0 1 1 42.928 37.78 2 0.0010562 49210 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.498 58.931 8067500 0 8067500 0 0 0 0 0 0 0 0 0 0 0 0 0 56912 777 51159 479421 380456 380456 935 1 VLPPEVADGGVVDSGVYAVPPPAER Unmodified 2489.2802 0.28020419 1788 P56945 BCAR1 Breast cancer anti-estrogen resistance protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 82.925 82.916 3 0.037473 96094 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 17.647 10.025 7922800 0 0 0 0 2145400 3182300 0 0 0 0 2595100 0 0 0 0 56913 1788 51160 479422;479423;479424 380457 380457 1 VLPPPAGYVPIR Unmodified 1277.7496 0.74959297 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.714 76.773 2 0.0080018 88593 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 91.069 81.288 477830000 0 0 0 18559000 26549000 31001000 33310000 31406000 24606000 41427000 50159000 62402000 43055000 47754000 67606000 56914 516 51161 479425;479426;479427;479428;479429;479430;479431;479432;479433;479434;479435;479436 380458;380459;380460;380461 380458 0 VLPPPAGYVPIRTPAR Unmodified 1702.9883 0.98826011 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 73.223 73.273 3 0.023762 84341 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 29.341 25.239 128900000 0 0 0 4258700 8729400 13883000 9283900 8588300 12273000 11994000 0 16362000 12211000 12339000 18981000 56915 516 51162 479437;479438;479439;479440;479441;479442;479443;479444;479445;479446;479447 380462 380462 1 VLPPPAGYVPIRTPARK Unmodified 1831.0832 0.083223125 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.157 64.249 4 0.0020522 72512 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.548 43.088 132730000 0 0 0 5741000 4188400 10437000 7053100 12019000 8066000 12301000 11788000 19933000 9002000 8782400 23417000 56916 516 51163 479448;479449;479450;479451;479452;479453;479454;479455;479456;479457;479458;479459 380463;380464;380465;380466;380467;380468;380469;380470 380465 6 VLPQPTNLATPNTK Unmodified 1492.8249 0.82494275 1739 P54278 PMS2 Mismatch repair endonuclease PMS2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 57.989 57.649 2 0.010984 65597 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 39.785 24.524 17338000 0 0 0 4827500 4838600 0 0 7672200 0 0 0 0 0 0 0 56917 1739 51164 479460;479461;479462;479463 380471;380472;380473;380474 380472 4 VLPQTILYK Unmodified 1073.6485 0.64848194 4696 Q9NWF9 RNF216 E3 ubiquitin-protein ligase RNF216 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 67.599 67.782 2 0.037906 77802 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 45.081 30.412 37387000 0 0 0 0 0 4292800 4733900 5063800 5845900 6370100 0 0 0 5005200 6075500 56918 4696 51165 479464;479465;479466;479467;479468;479469;479470 380475;380476;380477 380476 3 VLPSCDLAR Unmodified 1029.5277 0.52771487 3920 Q96LJ7 DHRS1 Dehydrogenase/reductase SDR family member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.418 41.596 2 0.031671 46273 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 47.657 32.882 77142000 0 0 0 4557700 5596100 5677200 4901300 3719500 6662000 6674400 6754200 12047000 8303600 6390100 5859100 56919 3920 51166 479471;479472;479473;479474;479475;479476;479477;479478;479479;479480;479481;479482 380478;380479 380478 2 VLPSFWIPSLTPEAK Unmodified 1683.9236 0.92359417 5133 Q9Y314 NOSIP Nitric oxide synthase-interacting protein yes yes 0 0 0 By MS/MS 10 0 1 1 96.013 96.167 2 0.019373 111573 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.299 38.196 2700900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2700900 56920 5133 51167 479483 380480 380480 1 VLPSHLITYK Unmodified 1169.6808 0.6808447 2706 Q53LP3 SOWAHC Ankyrin repeat domain-containing protein SOWAHC yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 55.432 55.621 3 0.018533 62746 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 50.194 35.896 147310000 0 0 0 7394300 0 14802000 13224000 11151000 10687000 14516000 15345000 15723000 9703900 11422000 23336000 56921 2706 51168 479484;479485;479486;479487;479488;479489;479490;479491;479492;479493;479494 380481;380482;380483;380484;380485;380486 380481 5 VLPSITTEILK Unmodified 1212.7329 0.73293985 1343 P35232 PHB Prohibitin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 82.973 83.031 2 0.031237 96026 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 38.303 26.943 36921000 0 0 0 2080500 2971500 2383300 2473800 4821900 1628200 4802200 4409600 5338600 0 0 6010900 56922 1343 51169 479495;479496;479497;479498;479499;479500;479501;479502;479503;479504 380487;380488 380487 2 VLPSIVNEVLK Unmodified 1209.7333 0.7332742 4038 Q99623 PHB2 Prohibitin-2 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 86.722 86.838 2 0.036836 100415 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.344 7.8711 7954900 0 0 0 0 0 0 0 0 0 0 0 0 3224500 1576600 3153800 56923 4038 51170 479505;479506;479507 380489 380489 1 VLPSPARPFPASLGR Unmodified 1563.8885 0.88854606 1546 P48634 PRRC2A Protein PRRC2A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 70.859 70.76 3 0.0085769 81408 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 36.392 17.559 23229000 0 0 0 3641500 2463300 4898200 3711700 4875700 3638600 0 0 0 0 0 0 56924 1546 51171 479508;479509;479510;479511;479512;479513 380490 380490 1 VLPSSAAATPQQTSPAALPVFNAK Unmodified 2365.2642 0.2641602 4364 Q9H2F5 EPC1 Enhancer of polycomb homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.639 81.7 3 2.907E-05 93771 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 39.288 31.748 109710000 0 0 0 3677400 6219900 7143500 8417100 9809600 7913500 12290000 8513600 12830000 6049500 11622000 15227000 56925 4364 51172 479514;479515;479516;479517;479518;479519;479520;479521;479522;479523;479524;479525 380491;380492;380493;380494;380495;380496;380497;380498;380499;380500;380501;380502 380500 12 VLPTHDASK Unmodified 966.51345 0.51344502 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 9.9176 9.2133 2 0.005264 7390 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 78.516 62.635 2168900000 377710000 1244600000 311170000 16097000 14630000 16878000 20111000 15081000 10467000 12622000 852690 38241000 21520000 20808000 48107000 56926 1124 51173 479526;479527;479528;479529;479530;479531;479532;479533;479534;479535;479536;479537;479538;479539;479540;479541 380503;380504;380505;380506;380507;380508;380509;380510;380511;380512;380513;380514;380515;380516;380517 380516 15 VLPTPQPLLPAPSGSSAPPHPAK Unmodified 2258.2423 0.24230254 2726 Q5H9F3 BCORL1 BCL-6 corepressor-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 74.975 74.997 3 0.0030544 86928 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 28.418 19.709 44864000 0 0 0 2458000 3791700 5903500 3766400 2914700 0 3863400 6881900 6179100 3435300 5669900 0 56927 2726 51174 479542;479543;479544;479545;479546;479547;479548;479549;479550;479551 380518;380519;380520;380521;380522;380523;380524 380522 7 VLPTPTEK Unmodified 883.50148 0.50148335 4886 Q9UGP5 POLL DNA polymerase lambda yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 28.285 28.502 2 0.042322 30626 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 49.65 21.077 36962000 0 0 0 0 3007900 3124700 3740400 2979000 2215000 4436400 5809200 5507300 0 0 6141800 56928 4886 51175 479552;479553;479554;479555;479556;479557;479558;479559;479560 380525 380525 1 VLPTQPNPVDASR Unmodified 1392.7361 0.73612775 3364 Q8N766 EMC1 ER membrane protein complex subunit 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 46.982 47.233 2 0.025208 52940 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 48.998 38.766 23380000 0 0 0 0 4168800 0 0 0 0 0 6070200 7092900 6047700 0 0 56929 3364 51176 479561;479562;479563;479564 380526;380527;380528 380526 3 VLPTYDASK Unmodified 992.51786 0.51786169 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34.918 34.071 2 0.021764 42852 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.665 26.598 891840000 13814000 674500000 4527300 11953000 7759800 11704000 11961000 11190000 7720100 13464000 26071000 23229000 12209000 17154000 44588000 56930 487 51177 479565;479566;479567;479568;479569;479570;479571;479572;479573;479574;479575;479576;479577;479578;479579 380529;380530;380531 380529 3 VLPVPQK Unmodified 779.49052 0.49052473 61 CON__P02666 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.8 33.982 2 0.023434 36236 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 85.306 40.333 + 1400300000 0 0 0 116560000 189390000 267930000 136600000 110360000 60214000 68122000 183870000 99148000 53109000 52775000 62201000 56931 61 51178 479580;479581;479582;479583;479584;479585;479586;479587;479588;479589;479590;479591 380532;380533;380534;380535;380536;380537;380538 380535 7 VLPVYGGPK Unmodified 928.5382 0.53820321 5050 Q9UPN6 SCAF8 Protein SCAF8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.959 48.121 2 0.0093345 55134 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 67.032 59.464 505240000 0 0 0 28377000 31043000 26869000 40088000 37303000 36638000 44160000 59970000 57469000 42919000 47879000 52522000 56932 5050 51179 479592;479593;479594;479595;479596;479597;479598;479599;479600;479601;479602;479603 380539;380540;380541;380542;380543;380544;380545;380546;380547;380548;380549 380548 11 VLPWLGAIDDSVK Unmodified 1411.7711 0.77111627 238 O14981 BTAF1 TATA-binding protein-associated factor 172 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 95.741 92.108 2 0.001427 114250 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.05 63.536 33589000 0 33226000 362930 0 0 0 0 0 0 0 0 0 0 0 0 56933 238 51180 479604;479605 380550 380550 1 VLPYSNITVREESLK Unmodified 1746.9516 0.95159983 3999 Q96T58 SPEN Msx2-interacting protein yes yes 0 0 1 By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 67.845 67.972 3 0.00084061 77393 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.213 44.932 38288000 0 0 0 0 3557300 0 8991300 0 6617500 0 7701200 0 5063300 0 6357600 56934 3999 51181 479606;479607;479608;479609;479610;479611 380551;380552;380553 380551 3 VLQALEGLK Unmodified 969.58588 0.58588168 1401 P39019 RPS19 40S ribosomal protein S19 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.795 64.884 2 0.0031256 74335 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 91.069 36.864 335840000 0 0 0 12990000 18545000 19675000 18463000 13602000 18798000 21295000 33262000 53763000 38218000 36268000 50959000 56935 1401 51182 479612;479613;479614;479615;479616;479617;479618;479619;479620;479621;479622;479623 380554;380555;380556;380557;380558;380559;380560;380561;380562;380563;380564;380565 380562 10 VLQALGSEPIQYAVPVVK Unmodified 1910.0877 0.08769938 121 O00159 MYO1C Unconventional myosin-Ic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 2 2 2 2 2 2 2 2 1 2 2 85.912 85.998 2;3 4.2279E-31 99672 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 117.98 113.43 164520000 0 0 0 1551400 12304000 13265000 9002700 13927000 12311000 23089000 17111000 24712000 6434800 11323000 19489000 56936 121 51183 479624;479625;479626;479627;479628;479629;479630;479631;479632;479633;479634;479635;479636;479637;479638;479639;479640;479641;479642;479643;479644;479645 380566;380567;380568;380569;380570;380571;380572;380573;380574;380575;380576;380577;380578;380579;380580;380581;380582 380568 17 VLQAQGSSDPEEESVLYSNR Unmodified 2207.0342 0.03421984 2577 Q15785 TOMM34 Mitochondrial import receptor subunit TOM34 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 60.231 60.336 2;3 3.5995E-58 68326 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 154.6 143.65 940770000 0 0 0 56621000 57745000 63330000 71148000 65622000 52600000 85903000 115750000 101810000 71245000 64612000 134380000 56937 2577 51184 479646;479647;479648;479649;479650;479651;479652;479653;479654;479655;479656;479657;479658;479659;479660;479661;479662;479663;479664;479665;479666;479667;479668;479669 380583;380584;380585;380586;380587;380588;380589;380590;380591;380592;380593;380594;380595;380596;380597;380598;380599;380600;380601;380602;380603;380604 380592 16 VLQATVVAVGSGSK Unmodified 1314.7507 0.75071518 1853 P61604 HSPE1 10 kDa heat shock protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 6.45 3.89 8 2 12 5 4 1 1 1 1 1 1 1 1 1 1 1 1 1 55.424 52.572 2;3 3.1091E-18 70848 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 122.7 41.403 670570000 185890000 330640000 15181000 5403200 1694600 1952700 2717200 2441600 1741700 3411200 23033000 26464000 2158600 15506000 52339000 56938 1853 51185 479670;479671;479672;479673;479674;479675;479676;479677;479678;479679;479680;479681;479682;479683;479684;479685;479686;479687;479688;479689;479690;479691 380605;380606;380607;380608;380609;380610;380611;380612;380613;380614;380615;380616;380617 380612 9 VLQDMGLPTGAEGR Oxidation (M) 1458.7137 0.71367774 2207 Q12906 ILF3 Interleukin enhancer-binding factor 3 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 1 2 1 2 1 2 2 2 2 2 2 47.279 47.482 2 4.422E-09 53273 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 119.45 113.15 306680000 0 0 0 21836000 10308000 34946000 9379000 14154000 9053200 39189000 32453000 37852000 36570000 25354000 35591000 56939 2207 51186 479692;479693;479694;479695;479696;479697;479698;479699;479700;479701;479702;479703;479704;479705;479706;479707;479708;479709;479710;479711;479712 380618;380619;380620;380621;380622;380623;380624;380625;380626;380627;380628;380629;380630;380631;380632 380630 3598 10 VLQDMGLPTGAEGR Unmodified 1442.7188 0.71876312 2207 Q12906 ILF3 Interleukin enhancer-binding factor 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.978 64.07 2 7.0868E-12 73998 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 114.86 80.476 262920000 0 0 0 17042000 12027000 20910000 13523000 13358000 12178000 21195000 19401000 29920000 24477000 25496000 53388000 56940 2207 51186 479713;479714;479715;479716;479717;479718;479719;479720;479721;479722;479723;479724 380633;380634;380635;380636;380637;380638;380639;380640;380641;380642;380643;380644;380645;380646 380645 14 VLQDMGLPTGAEGRDSSK Oxidation (M) 1875.8996 0.89964061 2207 Q12906 ILF3 Interleukin enhancer-binding factor 3 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2.33 0.471 4 2 1 3 2 43.911 38.957 3 6.631E-27 50700 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.24 100.19 141040000 12367000 98622000 30049000 0 0 0 0 0 0 0 0 0 0 0 0 56941 2207 51187 479725;479726;479727;479728;479729;479730 380647;380648;380649;380650;380651;380652;380653;380654;380655;380656 380648 3598 8 VLQDMGLPTGAEGRDSSK Unmodified 1859.9047 0.90472599 2207 Q12906 ILF3 Interleukin enhancer-binding factor 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 3 1 60.931 55.203 2;3 2.3775E-35 71393 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.72 98.112 216980000 14984000 186190000 15805000 0 0 0 0 0 0 0 0 0 0 0 0 56942 2207 51187 479731;479732;479733;479734;479735 380657;380658;380659;380660;380661;380662;380663;380664;380665 380658 9 VLQDWNALK Unmodified 1085.5869 0.58694431 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 63.128 63.18 2 0.0081255 72833 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 70.525 40.358 58575000 0 0 0 0 12564000 0 0 11519000 0 0 16277000 0 0 18215000 0 56943 619 51188 479736;479737;479738;479739;479740 380666;380667;380668;380669 380669 4 VLQEDILLRK Unmodified 1225.7394 0.73942221 2086 Q03001 DST Dystonin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.558 58.674 3 0.0084416 66201 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 35.652 3.1288 50574000 0 0 0 2370300 2216500 4848200 3739800 3232200 3845400 4876300 6086300 5941600 4068000 3687200 5661800 56944 2086 51189 479741;479742;479743;479744;479745;479746;479747;479748;479749;479750;479751;479752 380670;380671;380672;380673;380674 380674 5 VLQEILEK Unmodified 970.5699 0.56989727 5000 Q9ULM3 YEATS2 YEATS domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54.915 54.341 2 0.0082674 60634 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 86.794 21.991 137220000 0 41497000 3018700 5796800 9257300 9500500 4518900 4848700 4622700 11588000 9052800 15563000 6161800 3865900 7930400 56945 5000 51190 479753;479754;479755;479756;479757;479758;479759;479760;479761;479762;479763;479764;479765;479766 380675;380676;380677;380678;380679;380680;380681;380682;380683;380684 380683 10 VLQELDMSDFEEQFK Oxidation (M) 1872.8451 0.84514543 664 O95466 FMNL1 Formin-like protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 2 1 79.238 79.24 2 6.547E-21 91654 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 117.23 111.26 45452000 0 0 0 1849300 3427600 8743900 2839800 0 0 11330000 7226700 6221900 0 3813200 0 56946 664 51191 479767;479768;479769;479770;479771;479772;479773;479774;479775;479776 380685;380686;380687;380688;380689;380690;380691;380692;380693;380694 380686 809 10 VLQELDMSDFEEQFK Unmodified 1856.8502 0.8502308 664 O95466 FMNL1 Formin-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS 5 3.56 1 1 1 2 1 89.908 87.237 2 1.9411E-22 108033 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 158.06 129.1 62716000 0 60323000 0 0 0 0 0 0 0 2392300 0 0 0 0 0 56947 664 51191 479777;479778;479779 380695;380696 380696 2 VLQGDLVMNVYR Oxidation (M) 1421.7337 0.7336849 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 2 2 2 2 2 2 1 2 2 2 2 67.336 67.441 2 2.6955E-08 76909 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 123.35 92.281 357980000 0 0 0 6065700 14837000 58034000 22781000 13835000 13549000 42971000 17843000 50126000 26301000 34283000 57358000 56948 1565 51192 479780;479781;479782;479783;479784;479785;479786;479787;479788;479789;479790;479791;479792;479793;479794;479795;479796;479797;479798;479799;479800;479801 380697;380698;380699;380700;380701;380702;380703;380704;380705;380706;380707;380708;380709;380710;380711;380712 380710 2505 15 VLQGDLVMNVYR Unmodified 1405.7388 0.73877028 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 76.859 76.986 2 0.00083371 88954 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 90.15 63.036 15637000 0 0 0 0 0 1990800 0 0 0 3269900 0 0 0 2383000 7992800 56949 1565 51192 479802;479803;479804;479805 380713;380714;380715;380716 380714 4 VLQGFNK Unmodified 804.44939 0.4493882 4525 Q9HD26 GOPC Golgi-associated PDZ and coiled-coil motif-containing protein yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 33.101 27.718 2 0.03098 38493 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 91.093 52.723 153090000 75024000 78061000 0 0 0 0 0 0 0 0 0 0 0 0 0 56950 4525 51193 479806;479807 380717;380718 380718 2 VLQGLIEVR Unmodified 1025.6233 0.62332982 3315 Q8N201 INTS1 Integrator complex subunit 1 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 71.353 71.54 2 0.0085848 82367 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 69.198 37.908 14919000 0 0 0 0 0 1833400 0 2057100 0 0 2078400 0 2729200 2672500 3548800 56951 3315 51194 479808;479809;479810;479811;479812;479813 380719;380720;380721 380719 3 VLQGSITHCAEPYMK Unmodified 1732.8277 0.82766164 4258 Q9BZ29 DOCK9 Dedicator of cytokinesis protein 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 60.197 54.217 3 0.0060585 70658 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 44.44 34.101 39501000 26367000 9077100 4056300 0 0 0 0 0 0 0 0 0 0 0 0 56952 4258 51195 479814;479815;479816 380722;380723 380722 2 VLQGVIDMK Unmodified 1001.558 0.55795237 3220 Q8IUR7 ARMC8 Armadillo repeat-containing protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8 3.46 3 9 1 1 1 1 1 1 1 1 1 1 1 1 61.832 60.47 2 0.0081026 78258 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.069 57.377 143370000 2966700 103320000 1631600 0 2474000 3852600 2260400 0 0 4256900 4329200 5128700 3418700 3366000 6361400 56953 3220 51196 479817;479818;479819;479820;479821;479822;479823;479824;479825;479826;479827;479828 380724;380725;380726;380727;380728;380729;380730;380731;380732 380727 9 VLQIVTNRDDVQGYAAK Unmodified 1889.0007 0.0006752871 689 O95782 AP2A1 AP-2 complex subunit alpha-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 59.099 59.159 3 0.0024207 67391 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 43.297 33.198 53276000 0 0 0 2787800 2395500 5810700 1863400 5582700 3480800 8577100 5596400 0 0 4298300 12883000 56954 689 51197 479829;479830;479831;479832;479833;479834;479835;479836;479837;479838 380733;380734;380735;380736;380737;380738;380739;380740 380734 8 VLQLEDDSLDSK Unmodified 1360.6722 0.67219008 2734 Q5JSH3 WDR44 WD repeat-containing protein 44 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 59.193 57.859 2 1.3363E-14 66186 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 155.15 139.01 1402600000 45119000 1113200000 4088100 9884900 10093000 8961800 14738000 9681100 8451600 12789000 33102000 39282000 11038000 27598000 54571000 56955 2734 51198 479839;479840;479841;479842;479843;479844;479845;479846;479847;479848;479849;479850;479851;479852;479853;479854 380741;380742;380743;380744;380745;380746;380747;380748;380749;380750;380751;380752;380753;380754;380755;380756;380757 380750 16 VLQLFTR Unmodified 875.52289 0.52288749 2476 Q15021 NCAPD2 Condensin complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 67.82 67.881 2 0.023899 77825 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 94.262 37.752 98706000 0 0 0 6968300 0 14728000 8348000 9999600 7577200 13463000 12086000 0 14595000 10941000 0 56956 2476 51199 479855;479856;479857;479858;479859;479860;479861;479862;479863 380758;380759;380760 380758 3 VLQLMNLTDSR Unmodified 1288.6809 0.68092105 4923 Q9UIA9 XPO7 Exportin-7 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 78.053 78.279 2 0.0050024 90049 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.102 39.155 13208000 0 0 0 0 0 0 0 0 0 0 0 3594500 0 0 9613100 56957 4923 51200 479864;479865 380761 380761 1 VLQLTSWDEDAWASK Unmodified 1747.8417 0.84171503 1073 P18206 VCL Vinculin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 85.649 84.779 2 2.9632E-14 97938 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.38 84.239 42182000 0 13742000 0 0 0 4096500 0 0 0 0 4785700 0 0 1714400 17844000 56958 1073 51201 479866;479867;479868;479869;479870 380762;380763;380764 380764 3 VLQLYPNNK Unmodified 1087.6026 0.60259438 2080 Q02790 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 51.254 50.122 2 0.0012356 50800 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 131.04 92.245 5022700000 5530800 3537500000 35201000 57802000 43246000 76973000 79200000 67210000 59679000 91240000 152590000 176790000 106010000 146200000 387510000 56959 2080 51202 479871;479872;479873;479874;479875;479876;479877;479878;479879;479880;479881;479882;479883;479884;479885;479886;479887 380765;380766;380767;380768;380769;380770;380771;380772;380773;380774;380775;380776;380777;380778;380779;380780;380781;380782;380783;380784;380785;380786;380787;380788;380789 380772 25 VLQNIIK Unmodified 826.52764 0.52763852 3087 Q7Z3U7 MON2 Protein MON2 homolog yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 56.383 49.385 2 0.03784 67116 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 127.66 40.076 149360000 83381000 65981000 0 0 0 0 0 0 0 0 0 0 0 0 0 56960 3087 51203 479888;479889 380790 380790 0 VLQPHPVTPSDTETR Unmodified 1675.8529 0.85294842 1794 P57678 GEMIN4 Gem-associated protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 37.011 37.087 3 0.0007373 40915 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 58.824 46.295 111360000 0 0 0 8146900 11628000 0 10473000 11519000 8130300 17892000 14690000 0 16218000 12661000 0 56961 1794 51204 479890;479891;479892;479893;479894;479895;479896;479897;479898 380791;380792;380793;380794;380795;380796;380797;380798 380791 8 VLQPTVFPVVPR Unmodified 1350.8024 0.80235682 1327 P33121 ACSL1 Long-chain-fatty-acid--CoA ligase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 83.061 83.07 2 0.014416 96100 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 54.416 46.491 17497000 0 0 0 2396700 2646400 0 1731300 6039500 1241400 0 0 3441500 0 0 0 56962 1327 51205 479899;479900;479901;479902;479903;479904 380799;380800 380800 2 VLQQFADNDVSR Unmodified 1390.6841 0.68409218 1667 P51659 HSD17B4 Peroxisomal multifunctional enzyme type 2;(3R)-hydroxyacyl-CoA dehydrogenase;Enoyl-CoA hydratase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.776 46.942 2 2.3376E-14 52977 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 152.97 141.38 102150000 0 0 0 13025000 6656600 8891600 7458500 7736000 6605600 7919000 10688000 13732000 6316100 7275400 5846000 56963 1667 51206 479905;479906;479907;479908;479909;479910;479911;479912;479913;479914;479915;479916 380801;380802;380803;380804;380805;380806;380807;380808;380809;380810;380811;380812 380801 12 VLQQGDIGECAEPYMIFK Oxidation (M) 2112.986 0.98601278 3933 Q96N67 DOCK7 Dedicator of cytokinesis protein 7 yes yes 0 1 0 By MS/MS 2 0 1 1 84.652 79.908 2 0.0031909 99407 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 48.467 38.141 24693000 0 24693000 0 0 0 0 0 0 0 0 0 0 0 0 0 56964 3933 51207 479917 380813 380813 5422 1 VLQQGHFEDDDPDGFLG Unmodified 1887.8275 0.82752153 2968 Q6SPF0 SAMD1 Atherin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.634 76.689 2 0.00072448 88540 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 64.439 60.906 54579000 0 0 0 3252200 4004100 5653900 3604700 3867900 4451900 4193800 4094000 7545800 0 4057700 9853300 56965 2968 51208 479918;479919;479920;479921;479922;479923;479924;479925;479926;479927;479928 380814;380815;380816;380817 380814 4 VLQQRPNANAVR Unmodified 1364.7637 0.7636799 1784 P56524 HDAC4 Histone deacetylase 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.706 20.835 3 0.002928 21594 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 57.836 40.036 126260000 0 0 0 16685000 6148400 10525000 6855900 8771900 6949200 18242000 0 0 14651000 7428200 30000000 56966 1784 51209 479929;479930;479931;479932;479933;479934;479935;479936;479937;479938;479939;479940 380818;380819;380820;380821;380822;380823;380824;380825;380826;380827;380828;380829;380830 380818 13 VLQSALAAIR Unmodified 1040.6342 0.63422886 2206 Q12905 ILF2 Interleukin enhancer-binding factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.575 65.661 2 0.0029455 75480 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 78.516 32.798 503060000 0 0 0 27242000 31304000 36956000 30939000 36836000 20608000 51616000 39607000 48917000 38448000 48379000 92209000 56967 2206 51210 479941;479942;479943;479944;479945;479946;479947;479948;479949;479950;479951;479952 380831;380832;380833;380834;380835;380836;380837;380838;380839;380840;380841;380842;380843 380838 13 VLQSDEYEEVEDK Unmodified 1581.7046 0.70461243 282 O15397 IPO8 Importin-8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 44.949 43.598 2 1.1324E-62 48607 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 189.72 175.56 287130000 13780000 140520000 0 0 9779100 20727000 8406100 11795000 7556800 12766000 9998900 23669000 0 0 28129000 56968 282 51211 479953;479954;479955;479956;479957;479958;479959;479960;479961;479962;479963;479964;479965;479966;479967 380844;380845;380846;380847;380848;380849;380850;380851;380852;380853;380854;380855;380856;380857;380858;380859;380860 380850 16 VLQSEFCNAVR Unmodified 1321.6449 0.6448699 4651 Q9NUP9 LIN7C Protein lin-7 homolog C yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 53.128 53.117 2 0.040254 59106 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 66.692 55.202 11510000 0 0 0 3034600 0 0 0 0 0 0 4672400 0 0 3802900 0 56969 4651 51212 479968;479969;479970 380861 380861 0 VLQSEGEAVDPEANVIK Unmodified 1796.9156 0.91560825 3241 Q8IWI9 MGA MAX gene-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 62.504 62.104 2 2.0734E-13 71044 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 116.54 103.58 58457000 0 17041000 0 3510500 0 4950200 3325400 3633700 2017400 5184100 4193700 4830700 0 4216400 5553600 56970 3241 51213 479971;479972;479973;479974;479975;479976;479977;479978;479979;479980;479981 380862;380863;380864;380865;380866;380867;380868;380869;380870;380871;380872 380871 11 VLQSFTVDSSK Unmodified 1209.6241 0.62411768 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.449 48.61 2 0.00016938 54791 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 122.26 112.86 195730000 0 0 0 12954000 6471400 16933000 9627400 12482000 6050900 15166000 22408000 26819000 12352000 15835000 38632000 56971 487 51214 479982;479983;479984;479985;479986;479987;479988;479989;479990;479991;479992;479993 380873;380874;380875;380876;380877;380878;380879;380880;380881;380882;380883;380884 380879 12 VLQVSIGPGLPK Unmodified 1206.7336 0.73360855 2215 Q12965 MYO1E Unconventional myosin-Ie yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 77.851 76.724 2 0.0012474 88751 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 84.213 83.762 613610000 193520000 155460000 10033000 8420400 15995000 19043000 18494000 14652000 16541000 26373000 25930000 35863000 10109000 19653000 43520000 56972 2215 51215 479994;479995;479996;479997;479998;479999;480000;480001;480002;480003;480004;480005;480006;480007;480008;480009 380885;380886;380887;380888;380889;380890;380891;380892;380893;380894;380895;380896;380897;380898;380899 380897 13 VLRDNIQGITK Unmodified 1255.7248 0.72483478 1910 P62805 HIST1H4A Histone H4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 39.103 39.283 2;3 0.014598 43521 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 39.179 30.434 872280000 0 0 0 63023000 37791000 89148000 56075000 65029000 79329000 91151000 87021000 85968000 67631000 61064000 89047000 56973 1910 51216 480010;480011;480012;480013;480014;480015;480016;480017;480018;480019;480020;480021;480022;480023;480024;480025;480026;480027;480028;480029;480030;480031;480032;480033 380900;380901;380902;380903 380903 2 VLREEISLAK Unmodified 1156.6816 0.68157298 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.423 45.593 3 0.0022979 50311 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 61.577 33.4 547440000 0 0 0 23822000 27406000 44705000 38313000 34756000 42865000 60182000 49831000 70482000 41890000 41804000 71389000 56974 4139 51217 480034;480035;480036;480037;480038;480039;480040;480041;480042;480043;480044;480045 380904;380905;380906;380907;380908;380909;380910;380911;380912;380913;380914;380915 380913 6 VLREEQEHK Unmodified 1166.6044 0.60438529 2476 Q15021 NCAPD2 Condensin complex subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching 10 0 8 1 1 1 1 1 1 1 1 5.6613 5.7503 3 0.014316 3696 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 43.442 16.553 53510000 0 0 0 7644200 5091600 6980800 0 6173100 5361800 0 0 6378000 0 4775000 11106000 56975 2476 51218 480046;480047;480048;480049;480050;480051;480052;480053 380916 380916 1 VLRESGLK Unmodified 900.53927 0.53926584 1262 P30043 BLVRB Flavin reductase (NADPH) yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 19.267 15.672 2 0.039523 23201 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 143.73 63.505 1003100000 963950000 30655000 8456100 0 0 0 0 0 0 0 0 0 0 0 0 56976 1262 51219 480054;480055;480056 380917 380917 0 VLRLEEVQAK Unmodified 1183.6925 0.69247202 2052 Q01415 GALK2 N-acetylgalactosamine kinase yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 49.98 44.033 3 0.0023299 55148 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 74.841 28.84 268150000 256250000 0 11899000 0 0 0 0 0 0 0 0 0 0 0 0 56977 2052 51220 480057;480058 380918;380919 380919 1 VLRPPGGGSNFSLGFDEPTEQPVRK Unmodified 2683.3718 0.37181317 4956 Q9UK76 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed yes yes 0 0 2 By MS/MS By MS/MS By MS/MS 10 0 4 1 1 2 74.518 74.808 3;4 2.9304E-18 85600 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.696 67.886 121290000 0 0 0 0 0 0 0 0 0 0 7662100 11750000 0 0 101870000 56978 4956 51221 480059;480060;480061;480062 380920;380921;380922;380923;380924 380920 4 VLRPQVTAVAQQNQGEVPEPQDMK Oxidation (M) 2677.3494 0.34936316 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.993 57.113 3 4.2448E-56 64807 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 116.45 113.72 457120000 0 0 0 26635000 27628000 46993000 32647000 21621000 25344000 39201000 53925000 60784000 34394000 38399000 49553000 56979 2392 51222 480063;480064;480065;480066;480067;480068;480069;480070;480071;480072;480073;480074 380925;380926;380927;380928;380929;380930;380931;380932;380933;380934;380935;380936;380937;380938;380939;380940;380941 380932 3923 17 VLRPQVTAVAQQNQGEVPEPQDMK Unmodified 2661.3544 0.35444854 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 64.836 64.916 3 3.2222E-55 74488 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 111.67 104.56 174130000 0 0 0 7087000 8204500 16635000 8062500 14626000 0 16908000 17003000 25633000 8533100 18584000 32855000 56980 2392 51222 480075;480076;480077;480078;480079;480080;480081;480082;480083;480084;480085 380942;380943;380944;380945;380946;380947;380948;380949;380950;380951;380952;380953;380954;380955;380956;380957;380958 380948 17 VLRSFDSMISTNCTEELENAGVEVLK Unmodified 2940.4209 0.42087313 724 P00390 GSR Glutathione reductase, mitochondrial yes yes 0 0 1 By MS/MS 2 0 1 1 93.752 85.621 3 5.5683E-22 110937 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.039 82.463 14576000 14576000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56981 724 51223 480086 380959 380959 1 VLSANHGDPSIQTSGSEQTSPK Unmodified 2239.0717 0.071667978 4412 Q9H694 BICC1 Protein bicaudal C homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 34.29 34.401 3 1.2267E-07 36874 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 57.806 43.232 40818000 0 0 0 6370500 3652300 0 0 0 5115100 5840500 0 0 5458800 5990300 8390100 56982 4412 51224 480087;480088;480089;480090;480091;480092;480093 380960;380961;380962;380963;380964;380965;380966 380963 6 VLSAPPHFHFGQTNR Unmodified 1706.8641 0.86412223 1211 P26641 EEF1G Elongation factor 1-gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 2 1 1 1 1 2 1 1 2 58.529 58.807 3;4 0.00017942 66181 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.175 52.852 227930000 0 0 0 0 0 40677000 4827400 8782600 11656000 4254500 0 30977000 10872000 4655600 111230000 56983 1211 51225 480094;480095;480096;480097;480098;480099;480100;480101;480102;480103;480104;480105 380967;380968;380969;380970;380971;380972;380973;380974;380975;380976;380977 380972 8 VLSASEVAALSSPASSAPHSGGK Unmodified 2109.0702 0.070211415 4517 Q9HCK8 CHD8 Chromodomain-helicase-DNA-binding protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 67.145 65.841 3 6.1149E-56 87040 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 102.31 80.773 529840000 76645000 183510000 21067000 13535000 15639000 21794000 17466000 18169000 15693000 22173000 23985000 24610000 23026000 19549000 32980000 56984 4517 51226 480106;480107;480108;480109;480110;480111;480112;480113;480114;480115;480116;480117;480118;480119;480120;480121 380978;380979;380980;380981;380982;380983;380984;380985;380986;380987;380988;380989;380990;380991;380992;380993;380994;380995;380996;380997;380998;380999 380988 22 VLSASNVLVDAEGTVK Unmodified 1600.8672 0.8672015 4821 Q9P2K8 EIF2AK4 Eukaryotic translation initiation factor 2-alpha kinase 4 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 83.098 79.101 2 2.1139E-45 98460 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 157.52 118.21 125510000 0 125510000 0 0 0 0 0 0 0 0 0 0 0 0 0 56985 4821 51227 480122;480123 381000;381001 381000 2 VLSATSATK Unmodified 876.49165 0.49164694 2062 Q01780 EXOSC10 Exosome component 10 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 14.54 14.682 2 0.0059097 14064 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 76.478 7.0942 21915000 0 0 0 0 3580200 0 0 0 4265500 6951600 0 7117700 0 0 0 56986 2062 51228 480124;480125;480126;480127 381002;381003 381002 2 VLSDVDAFIAYVGTDQK Unmodified 1839.9254 0.92544466 4491 Q9HAV4 XPO5 Exportin-5 yes yes 0 0 0 By MS/MS 10 0 1 1 91.033 91.17 2 0.010935 105604 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.915 39.683 1266300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1266300 56987 4491 51229 480128 381004 381004 1 VLSEAAISASLEK Unmodified 1316.7187 0.71874635 670 O95573 ACSL3 Long-chain-fatty-acid--CoA ligase 3 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 73.816 69.803 2 0.00049418 87710 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.86 78.356 112060000 0 110600000 1462400 0 0 0 0 0 0 0 0 0 0 0 0 56988 670 51230 480129;480130 381005 381005 1 VLSECSPLMNDIFNK Oxidation (M) 1781.8328 0.8328066 1720 P53618 COPB1 Coatomer subunit beta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 77.593 77.811 2 0.0022379 89476 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.612 35.883 26524000 0 0 0 0 0 0 0 0 0 0 8060200 9050700 0 0 9413300 56989 1720 51231 480131;480132;480133 381006;381007 381006 2796 2 VLSECSPLMNDIFNK Unmodified 1765.8379 0.83789198 1720 P53618 COPB1 Coatomer subunit beta yes yes 0 0 0 By MS/MS 10 0 1 1 85.322 85.491 2 0.0024648 98788 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.435 50.825 5275900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5275900 56990 1720 51231 480134 381008 381008 1 VLSEDAIR Unmodified 901.4869 0.48689592 1170 P23919 DTYMK Thymidylate kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 34.221 34.355 2 0.009506 37848 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 82.671 36.301 428050000 0 0 0 27593000 26289000 54775000 43711000 34061000 26874000 44632000 49810000 47360000 38396000 34548000 0 56991 1170 51232 480135;480136;480137;480138;480139;480140;480141;480142;480143;480144;480145 381009;381010;381011;381012;381013;381014;381015;381016;381017 381009 7 VLSEPIGPESPSSTECPR Unmodified 1940.915 0.91495633 2713 Q56NI9 ESCO2 N-acetyltransferase ESCO2 yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 56.1 56.246 2 1.413E-07 63895 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 81.494 75.888 22848000 0 0 0 0 1677800 0 1230500 0 0 4029500 6838900 9071700 0 0 0 56992 2713 51233 480146;480147;480148;480149;480150 381018;381019 381018 2 VLSEVDFEER Unmodified 1221.5877 0.58773217 3968 Q96RK0 CIC Protein capicua homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.539 58.654 2 0.047283 66422 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 43.512 35.049 96937000 0 0 0 6777200 5915900 6925000 7988500 7189600 7288900 6496800 8847300 10161000 11192000 7968600 10187000 56993 3968 51234 480151;480152;480153;480154;480155;480156;480157;480158;480159;480160;480161;480162 381020 381020 1 VLSFDIECAGRK Unmodified 1393.7024 0.70238478 1234 P28340 POLD1 DNA polymerase delta catalytic subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.747 63.839 3 0.0017192 73095 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 54.27 40.261 77356000 0 0 0 3747400 3150500 5392100 4177700 4170300 4734600 7241300 6734100 11607000 6356900 7649500 12395000 56994 1234 51235 480163;480164;480165;480166;480167;480168;480169;480170;480171;480172;480173;480174 381021;381022;381023;381024;381025;381026;381027;381028;381029;381030;381031;381032 381021 12 VLSFIPPDGNFR Unmodified 1360.7139 0.71393574 5117 Q9Y2T2 AP3M1 AP-3 complex subunit mu-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 83.014 83.012 2 0.00061664 96008 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 76.943 54.857 33153000 0 0 0 2231300 3573000 4744400 3343600 4916900 0 7467700 0 6876500 0 0 0 56995 5117 51236 480175;480176;480177;480178;480179;480180;480181;480182;480183;480184 381033;381034;381035;381036;381037;381038;381039;381040;381041;381042;381043;381044 381035 10 VLSGEFQIVNPHLLK Unmodified 1692.9563 0.95629128 1171 P23921 RRM1 Ribonucleoside-diphosphate reductase large subunit yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 81.829 81.975 3 0.0016541 94469 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.037 40.982 50682000 0 0 0 0 0 4915900 1539500 2643000 3543600 5114600 3562500 0 0 2702700 26660000 56996 1171 51237 480185;480186;480187;480188;480189;480190;480191;480192 381045;381046;381047;381048;381049 381047 5 VLSGLEILSK Unmodified 1057.6383 0.63831118 276 O15357 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79.313 78.339 2 0.0018498 90443 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 96.331 26.908 513610000 118020000 125330000 37031000 8965600 11802000 19408000 13930000 16737000 11557000 31400000 19820000 23700000 16335000 20282000 39288000 56997 276 51238 480193;480194;480195;480196;480197;480198;480199;480200;480201;480202;480203;480204;480205;480206;480207 381050;381051;381052;381053;381054;381055;381056;381057;381058;381059;381060;381061;381062;381063;381064 381051 15 VLSGTIHAGQPVK Unmodified 1305.7405 0.74048484 2481 Q15029 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 2 2 2 1 34.181 34.34 2;3 2.5436E-09 36393 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 114.89 77.345 1274200000 0 0 0 68102000 74150000 90984000 111840000 82224000 91358000 111140000 170730000 170340000 124400000 141890000 37089000 56998 2481 51239 480208;480209;480210;480211;480212;480213;480214;480215;480216;480217;480218;480219;480220;480221;480222;480223;480224;480225;480226;480227;480228;480229;480230 381065;381066;381067;381068;381069;381070;381071;381072;381073;381074;381075;381076;381077;381078;381079;381080;381081;381082;381083;381084 381070 14 VLSHNLCTVLK Unmodified 1282.7067 0.70674187 4890 Q9UH65 SWAP70 Switch-associated protein 70 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 63.797 56.711 3 0.00013983 75986 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.021 65.546 46793000 29246000 17547000 0 0 0 0 0 0 0 0 0 0 0 0 0 56999 4890 51240 480231;480232 381085;381086;381087;381088 381088 4 VLSHQDDTALLK Unmodified 1338.7143 0.71432967 3704 Q93034 CUL5 Cullin-5 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 46.323 41.634 2;3 0.018523 51735 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 45.368 23.904 48607000 0 45312000 3294800 0 0 0 0 0 0 0 0 0 0 0 0 57000 3704 51241 480233;480234 381089;381090 381090 1 VLSHVNSGCQLLPQHQVPAY Unmodified 2246.1266 0.12662086 1054 P17535 JUND Transcription factor jun-D yes yes 0 0 0 By MS/MS 2 0 1 1 76.994 68.864 3 0.00051676 90766 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.844 33.181 19641000 19641000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57001 1054 51242 480235 381091;381092 381092 2 VLSIDQRNFK Unmodified 1218.6721 0.67207093 3245 Q8IWT0 ZBTB8OS Protein archease yes yes 0 0 1 By MS/MS 2 0 1 1 55.359 47.25 3 0.002664 64600 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.377 53.947 25563000 25563000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57002 3245 51243 480236 381093;381094 381093 2 VLSIGDGIAR Unmodified 999.57129 0.57129425 1192 P25705 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 59.018 59.105 2 0.002807 67337 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 79.906 32.839 226680000 0 0 0 23414000 13301000 15958000 15372000 18564000 13853000 19421000 0 21484000 21629000 16435000 47248000 57003 1192 51244 480237;480238;480239;480240;480241;480242;480243;480244;480245;480246;480247 381095;381096;381097;381098;381099;381100;381101;381102;381103;381104;381105 381100 10 VLSIGLPVAR Unmodified 1023.6441 0.64406526 3087 Q7Z3U7 MON2 Protein MON2 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.97 79.027 2 0.0018424 90876 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.253 74.122 43241000 0 0 0 1574300 1743100 4619100 2691900 2366100 1258900 5468700 4249000 4736600 2858500 3737200 7937600 57004 3087 51245 480248;480249;480250;480251;480252;480253;480254;480255;480256;480257;480258;480259 381106;381107;381108;381109;381110;381111;381112;381113;381114;381115 381109 10 VLSIQSHVIR Unmodified 1150.6822 0.68224168 181 O00764 PDXK Pyridoxal kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 48.557 49.045 3 0.0011181 54660 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 80.102 58.638 260220000 0 0 0 0 0 0 0 0 0 0 27881000 46275000 12239000 33666000 140150000 57005 181 51246 480260;480261;480262;480263;480264 381116;381117;381118;381119;381120;381121 381121 6 VLSLDTNITNQVNK Unmodified 1557.8362 0.83623572 2142 Q07864 POLE DNA polymerase epsilon catalytic subunit A yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 8.86 2.8 1 6 1 1 1 1 1 1 1 70.957 70.307 2 1.2395E-29 87840 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 143.4 117.28 359050000 0 343360000 0 0 1421800 2578600 0 0 0 2054800 0 0 2359100 3001300 4270900 57006 2142 51247 480265;480266;480267;480268;480269;480270;480271 381122;381123;381124;381125 381122 4 VLSLETSVNELNSQLNESK Unmodified 2103.0695 0.069542713 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 0 By MS/MS 10 0 1 1 83.774 83.964 2 3.691E-08 96938 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 106.32 91.762 7328900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7328900 57007 2495 51248 480272 381126 381126 1 VLSLGPAPEPPKPATSK Unmodified 1687.9509 0.95087155 5015 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 59.157 59.354 3 0.022131 66963 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 28.627 19.982 66929000 0 0 0 0 3709100 0 8358700 7049700 3855100 5528300 7818900 7172600 7087400 7640800 8708100 57008 5015 51249 480273;480274;480275;480276;480277;480278;480279;480280;480281;480282 381127 381127 1 VLSLLALVKPEVWTLK Unmodified 1808.1175 0.11754295 4987 Q9UL46 PSME2 Proteasome activator complex subunit 2 yes yes 0 0 1 By MS/MS 3 0 1 1 99.618 96.21 3 0.025659 115518 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 25.866 15.67 1284100 0 1284100 0 0 0 0 0 0 0 0 0 0 0 0 0 57009 4987 51250 480283 381128 381128 1 VLSLNFSECHTK Unmodified 1433.6973 0.6972994 5028 Q9UN86 G3BP2 Ras GTPase-activating protein-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 58.728 58.983 3 0.0094805 66273 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.439 29.117 89497000 0 0 0 0 0 13164000 6320000 2917600 10101000 6917700 8141300 10415000 7825200 8105500 15590000 57010 5028 51251 480284;480285;480286;480287;480288;480289;480290;480291;480292;480293 381129;381130;381131 381129 2 VLSMAPGLTSVEIIPFR Oxidation (M) 1845.007 0.0070062184 642 O95340 PAPSS2 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 2 92.178 92.302 2;3 0.00042119 106956 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.205 42.299 17334000 0 0 0 0 0 1165700 0 1092500 0 3561800 0 0 0 0 11514000 57011 642 51252 480294;480295;480296;480297;480298 381132;381133;381134 381133 779 2 VLSNRGDSLSR Unmodified 1202.6367 0.63674805 2555 Q15642 TRIP10 Cdc42-interacting protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 17.173 17.418 3 0.030625 16756 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 29.807 14.547 81163000 0 0 0 0 3355800 0 5909600 0 3257800 7735500 12759000 15465000 7820300 7835700 17023000 57012 2555 51253 480299;480300;480301;480302;480303;480304;480305;480306;480307 381135 381135 1 VLSNRPIMFR Unmodified 1231.6859 0.68594685 2263 Q13283 G3BP1 Ras GTPase-activating protein-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 52.559 52.764 3 0.0012546 58211 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.647 73.643 401090000 0 0 0 19702000 0 77856000 21549000 26734000 35487000 28644000 24818000 38040000 26953000 12953000 88352000 57013 2263 51254 480308;480309;480310;480311;480312;480313;480314;480315;480316;480317;480318 381136;381137;381138;381139;381140;381141;381142;381143;381144;381145;381146 381139 10 VLSPFAPDYIQR Unmodified 1404.7402 0.74015049 4993 Q9ULG1 INO80 DNA helicase INO80 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 78.539 78.681 2 0.038558 90962 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 42.743 37.417 18772000 0 0 0 0 0 0 4132700 4521000 0 4408800 0 0 0 5709200 0 57014 4993 51255 480319;480320;480321;480322 381147;381148;381149 381147 3 VLSPLIIK Unmodified 881.59499 0.5949898 3411 Q8NCN4 RNF169 E3 ubiquitin-protein ligase RNF169 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.916 73.982 2 0.047391 85402 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 47.849 33.073 53532000 0 0 0 3085500 3150900 4342900 4363700 3616100 2378300 4499700 6377000 5885900 4913200 4180400 6738500 57015 3411 51256 480323;480324;480325;480326;480327;480328;480329;480330;480331;480332;480333;480334 381150 381150 1 VLSPTAAK Unmodified 785.4647 0.46470391 3955 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.93 2.72 2 13 1 1 1 1 1 1 1 2 1 1 1 1 1 1 18.528 18.115 2 0.036441 18494 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 86.472 25.35 530050000 4850600 198330000 0 19199000 14261000 21190000 21704000 20096000 23800000 33845000 25058000 41440000 28805000 32520000 44951000 57016 3955 51257 480335;480336;480337;480338;480339;480340;480341;480342;480343;480344;480345;480346;480347;480348;480349 381151;381152;381153;381154 381152 2 VLSPTAAKPSPFEGK Unmodified 1527.8297 0.82969378 3955 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 48.756 48.276 3 0.00036057 55198 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 63.682 58.699 223300000 12767000 0 0 18432000 16771000 4407900 23404000 18276000 7213600 16760000 22645000 28002000 23238000 15609000 15777000 57017 3955 51258 480350;480351;480352;480353;480354;480355;480356;480357;480358;480359;480360;480361;480362 381155;381156;381157;381158;381159;381160;381161;381162;381163;381164;381165;381166;381167 381166 13 VLSQEMQK Oxidation (M) 977.48518 0.48518136 2895 Q6N069 NAA16 N-alpha-acetyltransferase 16, NatA auxiliary subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 7.6221 7.7061 2 0.0037207 6098 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 128.57 80.451 345690000 0 0 0 4950800 12894000 11356000 17667000 18339000 21232000 50097000 121280000 87871000 0 0 0 57018 2895 51259 480363;480364;480365;480366;480367;480368;480369;480370;480371 381168;381169;381170;381171;381172;381173;381174;381175;381176 381174 4533 9 VLSQEMQK Unmodified 961.49027 0.49026674 2895 Q6N069 NAA16 N-alpha-acetyltransferase 16, NatA auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 2 1 1 18.984 19.115 2 1.0885E-08 19352 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 164.53 116.41 622790000 0 0 0 17692000 30962000 27522000 37699000 49256000 43180000 111950000 122360000 182160000 0 0 0 57019 2895 51259 480372;480373;480374;480375;480376;480377;480378;480379;480380;480381 381177;381178;381179;381180;381181;381182;381183;381184 381182 8 VLSQPMPPTAGEAEQAADQQER Oxidation (M) 2368.0965 0.09650252 4771 Q9NZL4 HSPBP1 Hsp70-binding protein 1 yes yes 0 1 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 56.156 56.293 3 0.00010332 63830 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 40.381 31.562 23834000 0 0 0 0 0 6455300 0 0 0 11230000 0 0 0 6149100 0 57020 4771 51260 480382;480383;480384 381185 381185 6139 1 VLSQPMPPTAGEAEQAADQQER Unmodified 2352.1016 0.1015879 4771 Q9NZL4 HSPBP1 Hsp70-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 61.562 61.949 3 0.0039046 70164 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 29.013 25.726 18241000 0 0 0 0 0 0 0 0 0 0 0 0 0 5783000 12458000 57021 4771 51260 480385;480386 381186 381186 1 VLSQPQLR Unmodified 939.55016 0.55016488 3310 Q8N1B4 VPS52 Vacuolar protein sorting-associated protein 52 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.934 36.114 2 0.034341 39854 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 53.163 30.272 66159000 0 0 0 5196600 4714500 5137100 5094000 5576000 3686500 6108100 5109500 6629000 4704900 6230400 7972900 57022 3310 51261 480387;480388;480389;480390;480391;480392;480393;480394;480395;480396;480397;480398 381187;381188;381189;381190 381187 4 VLSQQAASVVK Unmodified 1128.6503 0.65027285 1285 P30566 ADSL Adenylosuccinate lyase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.711 37.892 2 0.00032914 41670 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 89.029 57.739 122860000 0 0 0 3447800 4047900 4370500 5446300 5316100 3316800 6589100 17850000 16199000 12432000 13070000 30770000 57023 1285 51262 480399;480400;480401;480402;480403;480404;480405;480406;480407;480408;480409;480410 381191;381192;381193;381194;381195;381196;381197;381198;381199;381200;381201 381196 11 VLSQSTPGTPSK Unmodified 1200.635 0.63501672 2893 Q6MZP7 LIN54 Protein lin-54 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 2 1 1 2 1 2 2 1 1 1 1 1 22.209 22.371 2 1.8758E-05 23652 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 105.2 81.427 112830000 0 0 0 7497000 4114500 7528200 9417300 7116400 8214300 13650000 9812100 14579000 9034500 10198000 11671000 57024 2893 51263 480411;480412;480413;480414;480415;480416;480417;480418;480419;480420;480421;480422;480423;480424;480425;480426 381202;381203;381204;381205;381206;381207;381208;381209;381210;381211 381202 10 VLSSAASLPGSELPSSRPEGSQGGELSR Unmodified 2754.3784 0.37841469 242 O15027 SEC16A Protein transport protein Sec16A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.761 66.844 3 3.5379E-113 75745 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 145.13 139.25 214270000 0 0 0 5986500 14070000 17693000 11628000 14183000 12145000 22125000 21949000 26966000 17366000 19587000 30573000 57025 242 51264 480427;480428;480429;480430;480431;480432;480433;480434;480435;480436;480437;480438 381212;381213;381214;381215;381216;381217;381218;381219;381220;381221;381222;381223 381219 12 VLSSIEQK Unmodified 902.5073 0.50729701 1312 P31947 SFN 14-3-3 protein sigma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 22.738 22.942 2 0.0047759 23020 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 114.78 0 5145300000 0 0 0 275500000 120270000 239080000 174540000 218020000 109080000 313190000 755750000 747920000 346610000 480680000 1364600000 57026 1312 51265 480439;480440;480441;480442;480443;480444;480445;480446;480447;480448;480449;480450;480451;480452;480453;480454;480455;480456;480457;480458;480459;480460;480461;480462 381224;381225;381226;381227;381228;381229;381230;381231;381232;381233;381234;381235;381236;381237;381238;381239;381240;381241;381242;381243;381244;381245;381246;381247 381224 20 VLSSLKPAAPSPATAATTAAAASTAASSTASSASK Unmodified 3102.6045 0.60445146 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 74.327 74.367 3 7.4201E-14 85740 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 40.017 37.673 27489000 0 0 0 0 5053700 0 0 8817000 0 4039900 0 9578800 0 0 0 57027 4139 51266 480463;480464;480465;480466 381248;381249;381250;381251 381248 4 VLSSPQLAQQGQGLMGHR Unmodified 1905.9843 0.98431372 202 O14686 KMT2D Histone-lysine N-methyltransferase 2D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 61.93 62.167 3 0.0020156 70316 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.777 31.459 22430000 0 0 0 0 0 6223500 0 6291700 0 0 0 0 0 2367300 7547800 57028 202 51267 480467;480468;480469;480470 381252;381253;381254;381255 381253 3 VLSSSETPAR Unmodified 1045.5404 0.54038805 3547 Q8WUI4 HDAC7 Histone deacetylase 7 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 18.084 18.317 2 0.0033866 17296 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.679 30.999 49683000 0 0 0 3300100 0 4717300 4455600 3318100 0 6320100 5328300 5281200 4780800 4130200 8050900 57029 3547 51268 480471;480472;480473;480474;480475;480476;480477;480478;480479;480480 381256;381257;381258;381259;381260;381261;381262;381263;381264 381259 8 VLSSTINNQAVETDEGIEEEIPDSPGIEK Unmodified 3112.4936 0.4935636 3248 Q8IWW6 ARHGAP12 Rho GTPase-activating protein 12 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 83.265 79.269 3 3.8925E-08 98423 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 56.903 50.539 19501000 0 19501000 0 0 0 0 0 0 0 0 0 0 0 0 0 57030 3248 51269 480481;480482 381265 381265 1 VLSTEEMELYELAQAAGGAIDPDVFK Unmodified 2795.3575 0.35752781 2910 Q6NZ67 MZT2B Mitotic-spindle organizing protein 2B yes yes 0 0 0 By MS/MS 2 0 1 1 101.51 93.377 3 3.3215E-05 120217 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.498 47.342 14305000 14305000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57031 2910 51270 480483 381266 381266 1 VLSTPDLEVR Unmodified 1127.6186 0.61863837 1720 P53618 COPB1 Coatomer subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 61.937 62.022 2 0.02179 71547 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 46.462 23.033 320840000 0 0 0 17978000 25064000 28517000 27577000 26549000 0 34139000 37962000 39337000 0 26953000 56768000 57032 1720 51271 480484;480485;480486;480487;480488;480489;480490;480491;480492;480493 381267;381268;381269;381270;381271;381272 381270 6 VLSTPDLEVRK Unmodified 1255.7136 0.71360139 1720 P53618 COPB1 Coatomer subunit beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 49.04 49.443 3 0.00087243 55905 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 57.019 43.34 57772000 0 0 0 0 0 13366000 4744800 0 0 0 13030000 16062000 0 0 10568000 57033 1720 51272 480494;480495;480496;480497;480498 381273;381274;381275 381273 3 VLSTSTGLTK Unmodified 1005.5706 0.57062555 2786 Q5T8P6 RBM26 RNA-binding protein 26 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 32.034 31.523 2 0.037025 40461 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.525 50.913 122760000 0 40374000 0 4652500 5016400 6462400 7133500 5253700 6347500 7428500 8436700 10228000 5977000 7472200 7974100 57034 2786 51273 480499;480500;480501;480502;480503;480504;480505;480506;480507;480508;480509;480510;480511;480512 381276;381277;381278 381277 2 VLSTTKPFEYETPEMEK Unmodified 2027.9762 0.9761596 2627 Q16666 IFI16 Gamma-interferon-inducible protein 16 yes yes 0 0 1 By MS/MS 2 0 1 1 72.891 67.346 3 0.005382 85152 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 44.299 41.16 23707000 0 23707000 0 0 0 0 0 0 0 0 0 0 0 0 0 57035 2627 51274 480513 381279 381279 1 VLSTVHTHSSVK Unmodified 1293.7041 0.70409934 2244 Q13155 AIMP2 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 1 2 2 2 1 2 1 1 2 2 2 12.217 12.369 2;3 0.00019041 11595 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 82.543 67.004 119620000 0 0 0 4235400 6300900 9407000 6695200 6645200 3707700 13279000 8135800 13762000 10360000 9439300 27647000 57036 2244 51275 480514;480515;480516;480517;480518;480519;480520;480521;480522;480523;480524;480525;480526;480527;480528;480529;480530;480531;480532 381280;381281;381282;381283;381284;381285;381286;381287;381288;381289;381290;381291;381292;381293 381282 8 VLSVAEVAATTATPDGGPR Unmodified 1810.9425 0.94249171 2448 Q147X3 NAA30 N-alpha-acetyltransferase 30 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 21 2 2 2 1 2 1 3 2 3 1 1 1 74.65 74.699 2;3 6.2933E-84 86223 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 215.34 184.16 900100000 0 0 0 17819000 45174000 42307000 9086000 13044000 9633700 171750000 236420000 340610000 2840000 5444600 5986500 57037 2448 51276 480533;480534;480535;480536;480537;480538;480539;480540;480541;480542;480543;480544;480545;480546;480547;480548;480549;480550;480551;480552;480553 381294;381295;381296;381297;381298;381299;381300;381301;381302;381303;381304;381305;381306;381307;381308;381309 381298 11 VLSVAEVAATTATPDGGPRATATK Unmodified 2283.207 0.20703925 2448 Q147X3 NAA30 N-alpha-acetyltransferase 30 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 74.881 69.273 3 1.0197E-11 85711 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 81.144 74.032 33510000 25349000 0 8161800 0 0 0 0 0 0 0 0 0 0 0 0 57038 2448 51277 480554;480555 381310;381311;381312 381311 3 VLSVCPSNKPAIVEAGGMQALGK Oxidation (M) 2341.2134 0.21338695 1010 P14923 JUP Junction plakoglobin yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 66.693 66.678 3 1.0493E-08 76746 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 60.602 42.778 36015000 0 0 0 0 7035400 0 0 10034000 0 8930200 0 0 10015000 0 0 57039 1010 51278 480556;480557;480558;480559 381313;381314;381315;381316 381316 1397 4 VLSVCPSNKPAIVEAGGMQALGK Unmodified 2325.2185 0.21847233 1010 P14923 JUP Junction plakoglobin yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By matching 10 0 5 1 1 1 1 1 75.472 75.38 3 0.0035534 87252 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 27.928 20.124 17060000 0 0 0 7990000 2737600 0 0 3057600 0 0 0 0 1829600 1445300 0 57040 1010 51278 480560;480561;480562;480563;480564 381317;381318 381318 2 VLSVETPLSIQAHPNK Unmodified 1731.9519 0.95193418 1338 P34949 MPI Mannose-6-phosphate isomerase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 7.27 3.62 2 2 7 2 1 1 1 1 1 1 1 1 1 72.791 71.196 3 0.000252 92528 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.932 62.188 585730000 441830000 13941000 69283000 2829100 0 0 3548500 0 0 6211500 7381200 10339000 0 7341800 23029000 57041 1338 51279 480565;480566;480567;480568;480569;480570;480571;480572;480573;480574;480575 381319;381320;381321;381322 381320 3 VLSVPESTPFTAVLK Unmodified 1586.892 0.89195969 1863 P61960 UFM1 Ubiquitin-fold modifier 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 88.948 87.831 2 7.581E-10 101894 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 94.616 90.943 1676600000 42657000 1326300000 17401000 4060200 14050000 23887000 14298000 18237000 13037000 33323000 31136000 27300000 12976000 22200000 75719000 57042 1863 51280 480576;480577;480578;480579;480580;480581;480582;480583;480584;480585;480586;480587;480588;480589;480590;480591 381323;381324;381325;381326;381327;381328;381329;381330;381331;381332;381333;381334;381335;381336;381337;381338;381339;381340;381341 381324 19 VLTAEELNAAQTSVAYGCIK Unmodified 2137.0725 0.072519601 1733 P54136 RARS Arginine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 4.69 3.56 6 3 4 3 4 2 1 1 2 80.843 77.974 2;3 0 97280 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 324.94 300.87 1508200000 98302000 1248600000 93187000 0 0 0 0 0 0 13387000 9100600 0 0 0 45659000 57043 1733 51281 480592;480593;480594;480595;480596;480597;480598;480599;480600;480601;480602;480603;480604 381342;381343;381344;381345;381346;381347;381348;381349;381350;381351;381352;381353;381354 381343 11 VLTANSNPSSPSAAK Unmodified 1442.7365 0.73652168 4660 Q9NV56 MRGBP MRG/MORF4L-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 25.168 24.547 2 1.638E-19 25888 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 136.48 129.1 204060000 7182100 51925000 0 11873000 10668000 13010000 13891000 11002000 9669400 13739000 13561000 18846000 12869000 15828000 0 57044 4660 51282 480605;480606;480607;480608;480609;480610;480611;480612;480613;480614;480615;480616;480617 381355;381356;381357;381358;381359;381360;381361;381362;381363;381364;381365;381366;381367;381368 381365 14 VLTDAVDDITSIDDFLAVSENHILEDVNK Unmodified 3199.5772 0.57723365 1340 P35221 CTNNA1 Catenin alpha-1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 101.84 97.739 3 0.004212 117204 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 26.13 23.723 26063000 0 26063000 0 0 0 0 0 0 0 0 0 0 0 0 0 57045 1340 51283 480618;480619 381369;381370 381370 2 VLTDGELAPNDR Unmodified 1298.6466 0.64664404 2792 Q5TAX3 ZCCHC11 Terminal uridylyltransferase 4 yes yes 0 0 0 By matching By MS/MS By matching By matching 10 0 4 1 1 1 1 43.751 43.761 2 0.0063518 49678 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 51.445 35.243 24999000 0 0 0 2620000 3054400 0 0 0 0 0 0 0 6230800 0 13094000 57046 2792 51284 480620;480621;480622;480623 381371 381371 1 VLTDYYR Unmodified 928.46543 0.46543219 642 O95340 PAPSS2 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 44.087 39.565 2 0.029852 51379 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.163 58.357 91015000 0 83848000 7166600 0 0 0 0 0 0 0 0 0 0 0 0 57047 642 51285 480624;480625 381372;381373 381373 2 VLTDYYRSLEK Unmodified 1385.7191 0.7190807 642 O95340 PAPSS2 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 6 2 2 2 65.904 59.913 2;3 7.7253E-07 79771 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 99.343 83.479 647070000 508540000 77297000 61228000 0 0 0 0 0 0 0 0 0 0 0 0 57048 642 51286 480626;480627;480628;480629;480630;480631 381374;381375;381376 381376 2 VLTEDEMGHPEIGDAIAR Oxidation (M) 1967.9259 0.92585536 997 P14324 FDPS Farnesyl pyrophosphate synthase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 56.861 56.902 3 3.3623E-17 64556 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 98.062 85.861 366310000 0 0 0 14223000 10712000 19385000 24259000 0 13300000 0 65744000 0 0 48369000 170320000 57049 997 51287 480632;480633;480634;480635;480636;480637;480638;480639 381377;381378;381379;381380;381381;381382;381383;381384;381385 381382 1352 9 VLTEDEMGHPEIGDAIAR Unmodified 1951.9309 0.93094074 997 P14324 FDPS Farnesyl pyrophosphate synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.983 67.065 3 2.7199E-26 76780 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 106.16 83.681 382480000 0 0 0 5040800 3639000 11085000 4717100 9123600 4808500 12577000 47769000 32446000 11875000 38962000 200440000 57050 997 51287 480640;480641;480642;480643;480644;480645;480646;480647;480648;480649;480650;480651 381386;381387;381388;381389;381390;381391;381392;381393;381394;381395 381395 9 VLTEIIASR Unmodified 1000.5917 0.59169534 873 P08758 ANXA5 Annexin A5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.918 59.031 2 0.0032866 66975 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 93.267 58.459 666850000 0 0 0 20503000 7543700 18399000 17487000 12751000 9816100 20227000 105730000 86877000 15637000 68046000 283830000 57051 873 51288 480652;480653;480654;480655;480656;480657;480658;480659;480660;480661;480662;480663 381396;381397;381398;381399;381400;381401;381402;381403;381404;381405;381406;381407;381408;381409 381401 14 VLTEIIASRTPEELR Unmodified 1725.9625 0.96249887 873 P08758 ANXA5 Annexin A5 yes yes 0 0 1 By MS/MS 2 0 1 1 80.353 72.223 3 0.0080017 94797 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.864 35.009 10096000 10096000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57052 873 51289 480664 381410 381410 1 VLTELLEQER Unmodified 1228.6663 0.66631685 2289 Q13428 TCOF1 Treacle protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.336 70.411 2 0.010929 80202 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 109.44 70.417 279320000 0 0 0 16012000 16843000 17958000 21750000 18877000 14645000 26979000 28848000 38331000 20300000 21325000 37456000 57053 2289 51290 480665;480666;480667;480668;480669;480670;480671;480672;480673;480674;480675;480676 381411;381412;381413;381414 381414 2 VLTELLEQERK Unmodified 1356.7613 0.76127986 2289 Q13428 TCOF1 Treacle protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 2 1 1 1 1 1 1 1 1 1 1 1 61.032 60.438 2;3 0.00053919 83238 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 99.815 75.039 129430000 23429000 0 0 5603300 5573100 10536000 7672800 8608600 10502000 0 12034000 12594000 9823800 11166000 11886000 57054 2289 51291 480677;480678;480679;480680;480681;480682;480683;480684;480685;480686;480687;480688;480689 381415;381416;381417;381418;381419;381420;381421;381422 381420 7 VLTELVSK Unmodified 887.53278 0.53278348 1237;1095 P19793;P48443;P28702 RXRA;RXRG;RXRB Retinoic acid receptor RXR-alpha;Retinoic acid receptor RXR-gamma;Retinoic acid receptor RXR-beta no no 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.001 47.167 2 0.0148 53324 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 69.905 33.335 254420000 0 0 0 16613000 12711000 19874000 18469000 19184000 10761000 27211000 24763000 29477000 22101000 18223000 35028000 57055 1095;1237 51292 480690;480691;480692;480693;480694;480695;480696;480697;480698;480699;480700;480701 381423;381424;381425 381423 2 VLTEQAEQERK Unmodified 1329.6888 0.6888432 4081 Q9BPX7 C7orf25 UPF0415 protein C7orf25 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 17.566 14.028 3 0.016637 18602 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 53.567 35.431 25459000 0 25459000 0 0 0 0 0 0 0 0 0 0 0 0 0 57056 4081 51293 480702;480703 381426;381427 381426 0 VLTFAYK Unmodified 840.47454 0.47454032 1243 P29144 TPP2 Tripeptidyl-peptidase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 63.58 57.59 2 0.031598 74215 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.734 52.178 378780000 253530000 94047000 31201000 0 0 0 0 0 0 0 0 0 0 0 0 57057 1243 51294 480704;480705;480706 381428 381428 1 VLTFDLTK Unmodified 935.53278 0.53278348 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72.276 71.793 2 0.013039 82240 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 73.26 23.902 931610000 0 568100000 26400000 14508000 16308000 27150000 22993000 18094000 17609000 35796000 41398000 40139000 25822000 26044000 51254000 57058 2431 51295 480707;480708;480709;480710;480711;480712;480713;480714;480715;480716;480717;480718;480719;480720 381429;381430;381431;381432;381433;381434;381435;381436;381437;381438;381439 381435 11 VLTGEEK Unmodified 774.41233 0.41233399 3993 Q96ST2 IWS1 Protein IWS1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7 3.87 3 5 1 1 1 1 1 1 1 1 8.5448 7.4826 2 0.023412 5684 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.512 5.9571 337790000 8691500 301570000 1901700 0 2899200 0 4097600 0 0 2821300 13025000 0 0 0 2781300 57059 3993 51296 480721;480722;480723;480724;480725;480726;480727;480728 381440;381441;381442;381443;381444;381445 381443 6 VLTGVAGEDAECHAAK Unmodified 1626.7672 0.76716988 649 O95373 IPO7 Importin-7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.89 3.9 7 11 2 3 2 1 1 1 1 1 1 1 1 1 1 1 33.675 31.917 2;3 0.00025491 41947 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.022 65.305 3126400000 132580000 2701600000 70631000 0 15851000 15735000 7588600 12429000 16025000 16400000 21221000 33153000 28071000 28966000 26137000 57060 649 51297 480729;480730;480731;480732;480733;480734;480735;480736;480737;480738;480739;480740;480741;480742;480743;480744;480745;480746 381446;381447;381448;381449;381450;381451;381452;381453;381454;381455;381456;381457;381458;381459;381460;381461;381462 381449 14 VLTIDPTEFK Unmodified 1161.6281 0.62814043 1721 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 76.624 76.776 2 0.00090231 88379 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 116.05 94.523 926210000 0 0 0 0 0 92515000 81045000 79312000 59686000 103580000 106170000 90373000 88526000 79427000 145580000 57061 1721 51298 480747;480748;480749;480750;480751;480752;480753;480754;480755;480756 381463;381464;381465;381466;381467;381468;381469;381470;381471;381472 381465 8 VLTLDHPDAVK Unmodified 1206.6608 0.66083754 685 O95749 GGPS1 Geranylgeranyl pyrophosphate synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 4 1 2 1 51.031 45.178 2;3 3.0175E-08 59174 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 142 90.141 310640000 13326000 243040000 54275000 0 0 0 0 0 0 0 0 0 0 0 0 57062 685 51299 480757;480758;480759;480760 381473;381474 381473 1 VLTLSDDLER Unmodified 1159.6085 0.60846762 1751 P55010 EIF5 Eukaryotic translation initiation factor 5 yes yes 0 0 0 By MS/MS 10 0 1 1 63.854 64.034 2 0.0098561 73405 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 57.032 23.875 13578000 0 0 0 0 0 0 0 13578000 0 0 0 0 0 0 0 57063 1751 51300 480761 381475 381475 1 VLTMPETCR Unmodified 1105.526 0.52600031 4011 Q99460 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 43.856 43.84 2 0.0037643 49614 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 96.253 80.05 91320000 0 0 0 10099000 8159400 19772000 0 0 0 21598000 0 31691000 0 0 0 57064 4011 51301 480762;480763;480764;480765;480766;480767 381476;381477;381478;381479;381480;381481 381481 6 VLTMPETCR Oxidation (M) 1121.5209 0.52091494 4011 Q99460 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 24.253 24.287 2 0.01173 25088 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 55.37 45.105 21763000 0 0 0 3433600 2960900 0 0 0 0 4354800 11014000 0 0 0 0 57065 4011 51301 480768;480769;480770;480771 381482 381482 5507 1 VLTPEEQLADK Unmodified 1241.6503 0.65033243 547 O75822 EIF3J Eukaryotic translation initiation factor 3 subunit J yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 48.922 47.628 2 3.1966E-05 61324 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.3 65.698 2893900000 59699000 1971000000 22691000 30675000 27206000 43178000 45208000 41452000 26708000 71167000 116270000 101850000 58779000 75918000 202130000 57066 547 51302 480772;480773;480774;480775;480776;480777;480778;480779;480780;480781;480782;480783;480784;480785;480786;480787 381483;381484;381485;381486;381487;381488;381489;381490;381491;381492;381493;381494;381495 381486 3 VLTPELYAELR Unmodified 1302.7184 0.71835242 967 P12277 CKB Creatine kinase B-type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.71 3.81 2 1 4 2 1 1 1 1 1 81.763 80.365 2 6.8989E-06 92439 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 140.75 93.862 542820000 0 178430000 36957000 0 0 0 0 0 0 0 60851000 45975000 0 42637000 177970000 57067 967 51303 480788;480789;480790;480791;480792;480793;480794 381496;381497;381498;381499;381500;381501;381502 381497 7 VLTPELYAELRAK Unmodified 1501.8504 0.85042922 967 P12277 CKB Creatine kinase B-type yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.3 0.458 7 3 6 3 1 80.983 75.429 2;3 1.898E-07 76186 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 111.39 89.342 1383200000 994680000 377180000 11327000 0 0 0 0 0 0 0 0 0 0 0 0 57068 967 51304 480795;480796;480797;480798;480799;480800;480801;480802;480803;480804 381503;381504;381505;381506;381507;381508;381509;381510;381511;381512 381505 6 VLTPTQVK Unmodified 884.53312 0.53311783 1269 P30086 PEBP1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.05 3.97 1 7 2 10 3 5 2 1 1 1 1 1 1 1 1 1 1 35.801 34.755 1;2 0.002564 94486 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 120.49 30.586 6473800000 666920000 4481200000 227120000 44137000 9424100 0 11591000 10711000 6259900 10501000 158390000 235010000 0 128810000 483750000 57069 1269 51305 480805;480806;480807;480808;480809;480810;480811;480812;480813;480814;480815;480816;480817;480818;480819;480820;480821;480822;480823;480824 381513;381514;381515;381516;381517;381518;381519;381520;381521;381522;381523;381524;381525;381526;381527;381528;381529 381523 9 VLTQEDFQK Unmodified 1106.5608 0.56078914 4684 Q9NVU7 SDAD1 Protein SDA1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 36.702 37.081 2 0.035371 39810 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.129 27.034 24215000 0 0 0 0 0 0 3506600 0 0 0 3752700 0 4634900 3665000 8656000 57070 4684 51306 480825;480826;480827;480828;480829 381530;381531 381530 2 VLTQLQSVPVEEPLEL Unmodified 1792.9822 0.98223126 3309 Q8N196 SIX5 Homeobox protein SIX5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 94.42 94.052 2 0.00059511 109386 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.213 49.575 83309000 0 49065000 0 0 0 1789100 2283500 0 2215800 5740700 4815300 5555400 1967000 3262500 6615000 57071 3309 51307 480830;480831;480832;480833;480834;480835;480836;480837;480838;480839 381532;381533;381534;381535 381534 4 VLTQMGSPHNPISSVS Oxidation (M) 1668.8141 0.81412007 2580 Q15797 SMAD1 Mothers against decapentaplegic homolog 1 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 7.71 3.61 2 5 1 1 1 1 1 1 1 53.36 51.603 2 0.00079184 58389 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 52.928 38.509 64658000 9622100 18084000 0 0 0 0 0 0 6524300 6065700 8992700 8404900 6964400 0 0 57072 2580 51308 480840;480841;480842;480843;480844;480845;480846 381536;381537;381538;381539;381540 381538 4229 5 VLTQMGSPHNPISSVS Unmodified 1652.8192 0.81920545 2580 Q15797 SMAD1 Mothers against decapentaplegic homolog 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.392 64.482 2 0.009711 73027 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.513 38.964 49842000 0 0 0 2993900 3144300 3896300 2604600 4880000 1542300 4113900 8386300 4960400 3857400 2883300 6579000 57073 2580 51308 480847;480848;480849;480850;480851;480852;480853;480854;480855;480856;480857;480858 381541 381541 1 VLTQMGSPLNPISSVS Oxidation (M) 1644.8393 0.83927219 4053 Q99717 SMAD5 Mothers against decapentaplegic homolog 5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 79.356 79.377 2 0.00027479 91743 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 64.121 49.431 168010000 0 0 0 17522000 16555000 21781000 21021000 16109000 18015000 0 0 21192000 20569000 15248000 0 57074 4053 51309 480859;480860;480861;480862;480863;480864;480865;480866;480867 381542;381543;381544;381545;381546;381547;381548;381549;381550 381550 5553 9 VLTQMGSPLNPISSVS Unmodified 1628.8444 0.84435757 4053 Q99717 SMAD5 Mothers against decapentaplegic homolog 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 85.348 85.415 2 0.00095216 98867 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 56.043 32.723 102620000 0 0 0 3954700 4586100 10195000 4675500 10636000 4062800 9335200 11045000 8855900 5747800 8891600 20638000 57075 4053 51309 480868;480869;480870;480871;480872;480873;480874;480875;480876;480877;480878;480879 381551;381552;381553;381554;381555;381556;381557;381558;381559;381560 381555 10 VLTQMGSPSVR Oxidation (M) 1189.6125 0.61250714 2579 Q15796 SMAD2 Mothers against decapentaplegic homolog 2 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 28.11 27.448 2 0.00041068 29825 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 79.16 27.73 174090000 9525500 17570000 0 7888200 10573000 18130000 17714000 8141600 11744000 15412000 18594000 0 14096000 11261000 13445000 57076 2579 51310 480880;480881;480882;480883;480884;480885;480886;480887;480888;480889;480890;480891;480892 381561;381562;381563;381564;381565;381566;381567;381568;381569;381570;381571;381572;381573 381561 4227 12 VLTQMGSPSVR Unmodified 1173.6176 0.61759251 2579 Q15796 SMAD2 Mothers against decapentaplegic homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43.199 42.394 2 6.8989E-06 47190 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 140.75 97.507 252860000 27108000 34187000 0 14089000 11583000 17653000 12208000 15757000 9347600 20168000 20268000 13902000 11880000 16373000 28336000 57077 2579 51310 480893;480894;480895;480896;480897;480898;480899;480900;480901;480902;480903;480904;480905;480906 381574;381575;381576;381577;381578;381579;381580;381581;381582;381583;381584;381585;381586;381587 381575 14 VLTQMGSPSVRCSSMS Oxidation (M) 1741.7797 0.77972517 2579 Q15796 SMAD2 Mothers against decapentaplegic homolog 2 yes yes 0 1 1 By MS/MS 2 0 1 1 43.954 37.161 2 0.017729 50997 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.958 66.986 6529100 6529100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57078 2579 51311 480907 381588 381588 4227 1 VLTQPSQSAVR Unmodified 1184.6513 0.65133548 5047 Q9UP83 COG5 Conserved oligomeric Golgi complex subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 28.952 29.244 2 0.0010169 30531 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.652 46.503 67986000 0 0 0 6939700 0 12597000 0 0 0 0 0 14428000 10511000 0 23511000 57079 5047 51312 480908;480909;480910;480911;480912;480913;480914 381589;381590;381591;381592 381591 4 VLTSAFSR Unmodified 879.48142 0.48141661 3907 Q96KG9 SCYL1 N-terminal kinase-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 40.921 41.202 2 0.015851 46206 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 68.214 41.094 92245000 0 0 0 0 0 21067000 0 20645000 0 20291000 0 17978000 0 12264000 0 57080 3907 51313 480915;480916;480917;480918;480919 381593;381594;381595;381596 381593 4 VLTSDIEK Unmodified 903.49131 0.49131259 1534 P48163 ME1 NADP-dependent malic enzyme yes yes 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 29.065 29.301 2 0.023017 31867 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 60.682 20.579 60910000 0 0 0 34719000 0 0 0 0 0 0 0 16929000 0 9262800 0 57081 1534 51314 480920;480921;480922 381597 381597 1 VLTSDRTLQK Unmodified 1159.6561 0.65608651 2283 Q13416 ORC2 Origin recognition complex subunit 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 23.716 19.744 3 0.044931 25381 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 35.541 12.169 202620000 184090000 0 18525000 0 0 0 0 0 0 0 0 0 0 0 0 57082 2283 51315 480923;480924 381598 381598 1 VLTSEDEYNLLSDRHFPDPLASSEK Unmodified 2861.3719 0.37193232 4275 Q9BZQ8 FAM129A Protein Niban yes yes 0 0 1 By MS/MS 2 0 1 1 89.539 81.409 4 0.00032944 105777 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 44.625 36.726 14878000 14878000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57083 4275 51316 480925 381599 381599 1 VLTSEQK Unmodified 803.43888 0.43888309 4277 Q9BZX2 UCK2 Uridine-cytidine kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 6.8219 6.9517 2 0.022748 4860 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 104.11 48.085 114870000 0 0 0 0 11734000 17407000 19405000 20916000 13975000 6481800 0 6326900 5593600 4728400 8305200 57084 4277 51317 480926;480927;480928;480929;480930;480931;480932;480933;480934;480935 381600;381601;381602;381603;381604;381605;381606 381600 7 VLTSGIFETK Unmodified 1093.6019 0.60192568 1938 P63092;Q5JWF2 GNAS Guanine nucleotide-binding protein G(s) subunit alpha isoforms short;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.549 63.641 2 0.0065119 73336 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 64.711 35.55 199150000 0 0 0 8601000 9917000 15633000 12127000 11171000 10832000 18470000 19763000 19840000 20390000 20171000 32234000 57085 1938 51318 480936;480937;480938;480939;480940;480941;480942;480943;480944;480945;480946;480947 381607;381608;381609;381610;381611 381611 3 VLTTGYWPTQSATPK Unmodified 1648.8461 0.84607213 2330 Q13618 CUL3 Cullin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 70.331 70.467 2 8.7561E-05 81003 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 93.258 83.825 43206000 0 0 0 0 1475600 4023100 3283500 3538400 0 3222300 6161400 4937700 2830700 4479400 9253900 57086 2330 51319 480948;480949;480950;480951;480952;480953;480954;480955;480956;480957 381612;381613;381614;381615;381616;381617 381615 6 VLTTSPSR Unmodified 859.47633 0.47633123 3156 Q86UU1 PHLDB1 Pleckstrin homology-like domain family B member 1 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 14.836 14.964 2 0.016434 14353 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 67.277 21.883 51259000 0 0 0 4497400 3005600 2756700 5979300 7089300 0 6637300 7365400 7370700 6557100 0 0 57087 3156 51320 480958;480959;480960;480961;480962;480963;480964;480965;480966 381618;381619;381620 381619 3 VLTTTALSTVSSGVQR Unmodified 1618.889 0.88899957 456 O75122 CLASP2 CLIP-associating protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.476 68.554 2 0.00035058 78654 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 82.543 74.03 74020000 0 0 0 3736300 4093800 4522200 6709400 5551900 5621300 7590800 9119300 10490000 4714400 4926700 6943900 57088 456 51321 480967;480968;480969;480970;480971;480972;480973;480974;480975;480976;480977;480978 381621;381622;381623;381624;381625;381626;381627;381628;381629;381630;381631;381632 381625 11 VLTVINQTQK Unmodified 1142.6659 0.66592292 1466 P42766 RPL35 60S ribosomal protein L35 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.198 41.377 2 7.4388E-43 44813 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 190.26 114.52 2908400000 0 0 0 185790000 188810000 202540000 229260000 181490000 179920000 298800000 304410000 350110000 198650000 204460000 384160000 57089 1466 51322 480979;480980;480981;480982;480983;480984;480985;480986;480987;480988;480989;480990 381633;381634;381635;381636;381637;381638;381639;381640;381641;381642;381643;381644;381645;381646;381647;381648;381649 381642 17 VLTWDVGK Unmodified 916.50182 0.5018177 5117 Q9Y2T2 AP3M1 AP-3 complex subunit mu-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 60.704 59.858 2 0.017183 67197 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.073 52.298 203170000 0 99173000 0 0 0 0 0 0 0 0 23864000 24939000 0 22608000 32582000 57090 5117 51323 480991;480992;480993;480994;480995 381650;381651;381652;381653 381651 4 VLVAGDTMDSVK Unmodified 1233.6275 0.6274885 613 O94973 AP2A2 AP-2 complex subunit alpha-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.83 2.61 1 5 1 1 1 1 1 1 51.149 50.053 2 0.0010322 56854 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.221 33.494 45270000 0 4331500 0 3687900 0 0 0 0 0 0 16775000 0 0 0 20475000 57091 613 51324 480996;480997;480998;480999;481000;481001 381654;381655;381656;381657;381658 381656 5 VLVALASEELAK Unmodified 1241.7231 0.72310344 4 A0FGR8 ESYT2 Extended synaptotagmin-2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 80.326 74.947 2 0.00019525 96688 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.89 68.681 34018000 11666000 0 22351000 0 0 0 0 0 0 0 0 0 0 0 0 57092 4 51325 481002;481003 381659;381660 381659 2 VLVALYEEPEK Unmodified 1288.6915 0.69146896 4005 Q99417 MYCBP C-Myc-binding protein yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 68.839 68.608 2 2.0638E-05 78431 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 123.88 102.98 93396000 0 1759900 0 3088500 4218100 10200000 3285300 4375900 9586200 6416500 10389000 10992000 5783800 7786000 15515000 57093 4005 51326 481004;481005;481006;481007;481008;481009;481010;481011;481012;481013;481014;481015;481016 381661;381662;381663;381664;381665;381666;381667;381668 381668 7 VLVALYEEPEKPNSALDFLK Unmodified 2274.2148 0.21475039 4005 Q99417 MYCBP C-Myc-binding protein yes yes 0 0 1 By MS/MS 2 0 1 1 95.129 86.999 3 0.00015686 112591 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.037 49.175 24630000 24630000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57094 4005 51327 481017 381669 381669 0 VLVANNSDTLK Unmodified 1172.6401 0.6401021 4975 Q9UKT7 FBXL3 F-box/LRR-repeat protein 3 yes yes 0 0 0 By MS/MS 2 0 1 1 41.564 36.469 2 3.6562E-09 47478 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.57 92.797 27285000 0 27285000 0 0 0 0 0 0 0 0 0 0 0 0 0 57095 4975 51328 481018 381670;381671;381672 381672 3 VLVAQHDVYK Unmodified 1170.6397 0.63970816 988 P13804 ETFA Electron transfer flavoprotein subunit alpha, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 37.735 32.732 2 0.0029036 45801 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 116.37 81.076 119510000 80925000 0 38590000 0 0 0 0 0 0 0 0 0 0 0 0 57096 988 51329 481019;481020 381673;381674;381675 381674 3 VLVASATMDTAR Unmodified 1233.6387 0.63872189 384 O60231 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 47.603 47.697 2 0.0025099 53964 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 74.162 45.763 11277000 0 0 0 0 0 4653100 3538700 3085000 0 0 0 0 0 0 0 57097 384 51330 481021;481022;481023;481024;481025;481026;481027;481028;481029 381676;381677;381678;381679;381680;381681;381682;381683;381684 381676 9 VLVASATMDTAR Oxidation (M) 1249.6336 0.63363651 384 O60231 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 33.04 33.552 2 0.00033276 36212 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 78.655 57.785 59741000 0 0 0 0 0 0 0 0 0 0 16372000 14130000 9763700 7645500 11830000 57098 384 51330 481030;481031;481032;481033;481034 381685;381686;381687;381688;381689 381689 495 5 VLVDHFGYTK Unmodified 1177.6132 0.61315906 49;774 P04114;CON__ENSEMBL:ENSBTAP00000032840 APOB Apolipoprotein B-100;Apolipoprotein B-48 no no 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 49.773 49.705 3 0.0068044 55253 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 57.348 45.78 + 40224000 0 0 0 7669800 0 10353000 10450000 0 0 0 0 0 0 11751000 0 57099 774;49 51331 481035;481036;481037;481038 381690 381690 1 VLVDMSR Unmodified 818.43202 0.43202358 1980 P78371 CCT2 T-complex protein 1 subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 38.383 38.519 2 0.020538 43695 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 84.244 27.733 1650500000 0 0 0 119220000 100800000 200010000 160540000 135480000 84843000 0 0 276120000 166370000 0 407140000 57100 1980 51332 481039;481040;481041;481042;481043;481044;481045;481046;481047 381691;381692;381693;381694;381695;381696;381697;381698 381698 8 VLVDMSR Oxidation (M) 834.42694 0.4269382 1980 P78371 CCT2 T-complex protein 1 subunit beta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 19.636 19.88 2 0.016586 19696 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 81.297 36.686 426490000 0 0 0 0 0 69426000 56766000 0 38223000 69333000 67899000 0 0 48940000 75899000 57101 1980 51332 481048;481049;481050;481051;481052;481053;481054 381699;381700;381701 381700 3199 3 VLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAK Unmodified 3929.0303 0.030327021 1980 P78371 CCT2 T-complex protein 1 subunit beta yes yes 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 106.53 100.09 4 1.1771E-93 126030 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 115.74 102.48 17708000 12964000 4744100 0 0 0 0 0 0 0 0 0 0 0 0 0 57102 1980 51333 481055;481056 381702;381703;381704;381705 381705 4 VLVDQTTGLSR Unmodified 1187.651 0.65100113 2566 Q15717 ELAVL1 ELAV-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 45.159 45.16 2 2.4248E-07 49556 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 144.77 55.416 161740000 0 0 0 16098000 18699000 0 22491000 19870000 16006000 0 48251000 0 0 20325000 0 57103 2566 51334 481057;481058;481059;481060;481061;481062;481063;481064;481065;481066;481067 381706;381707;381708;381709;381710;381711;381712;381713;381714;381715;381716;381717;381718;381719;381720 381714 15 VLVDSSFGQPTTQGEAR Unmodified 1790.8799 0.87989145 2179 Q10570 CPSF1 Cleavage and polyadenylation specificity factor subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.286 58.401 2 7.1143E-37 66355 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 132.5 123.77 132540000 0 0 0 7154600 7398700 8804500 10347000 8718300 6370700 10552000 11458000 15847000 12416000 15690000 17784000 57104 2179 51335 481068;481069;481070;481071;481072;481073;481074;481075;481076;481077;481078;481079 381721;381722;381723;381724;381725;381726;381727;381728;381729;381730;381731 381726 11 VLVDVER Unmodified 828.47052 0.47051757 868 P08621 SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.802 38.982 2 0.023849 41989 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.74 9.7563 1452300000 0 0 0 71577000 84544000 81671000 126030000 93723000 76356000 145480000 158750000 212450000 99562000 127930000 174220000 57105 868 51336 481080;481081;481082;481083;481084;481085;481086;481087;481088;481089;481090;481091 381732;381733;381734;381735;381736 381734 1 VLVEATYNPNMPFK Oxidation (M) 1637.8123 0.81232916 3255 Q8IX12 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.623 70.695 2 5.8765E-14 80967 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 113.93 99.236 718680000 0 0 0 23207000 35992000 73753000 38273000 43085000 59521000 79661000 60869000 81508000 47523000 56346000 118950000 57106 3255 51337 481092;481093;481094;481095;481096;481097;481098;481099;481100;481101;481102;481103 381737;381738;381739;381740;381741;381742;381743;381744;381745;381746;381747;381748 381743 4868 12 VLVEATYNPNMPFK Unmodified 1621.8174 0.81741453 3255 Q8IX12 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 77.92 78.025 2 3.3953E-05 90109 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 85.355 76.166 197650000 0 0 0 0 8757900 12756000 9301600 14581000 13440000 23890000 18596000 20317000 9674700 19455000 46876000 57107 3255 51337 481104;481105;481106;481107;481108;481109;481110;481111;481112;481113;481114 381749;381750;381751;381752;381753;381754;381755;381756;381757;381758;381759 381750 10 VLVEDTK Unmodified 802.44363 0.44363412 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching 9.22 2.2 1 8 1 1 1 1 1 1 1 1 1 18.17 17.902 2 0.01917 18610 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 110.61 41.179 251690000 0 19337000 0 18248000 0 40759000 23401000 17709000 17815000 41883000 34184000 38349000 0 0 0 57108 5187 51338 481115;481116;481117;481118;481119;481120;481121;481122;481123 381760;381761;381762;381763 381760 4 VLVEFSHK Unmodified 957.52837 0.5283668 5281 Q9Y6G5 COMMD10 COMM domain-containing protein 10 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 45.47 39.752 2 0.012096 50065 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 100.45 50.412 52004000 35416000 0 16588000 0 0 0 0 0 0 0 0 0 0 0 0 57109 5281 51339 481124;481125 381764;381765 381765 2 VLVEGPLNNLR Unmodified 1222.7034 0.70337105 3683 Q92900 UPF1 Regulator of nonsense transcripts 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 72.947 73.156 2 0.0015908 83221 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 71.692 50.79 53487000 0 0 0 0 0 0 0 0 0 0 0 0 11902000 14238000 27348000 57110 3683 51340 481126;481127;481128 381766;381767;381768 381767 3 VLVEITDVDFAALK Unmodified 1531.8498 0.84976052 3427 Q8NEM2 SHCBP1 SHC SH2 domain-binding protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 95.399 89.581 2 4.7284E-32 113856 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 153.12 116.59 29188000 29188000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57111 3427 51341 481129;481130 381769;381770 381770 2 VLVEPDAGAGVAVMK Oxidation (M) 1470.7752 0.77521537 1445 P42126 ECI1 Enoyl-CoA delta isomerase 1, mitochondrial yes yes 0 1 0 By MS/MS 10 0 1 1 57.608 58.209 2 0.00013944 65449 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.346 54.408 7761800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7761800 57112 1445 51342 481131 381771 381771 2277 1 VLVEPDAGAGVAVMK Unmodified 1454.7803 0.78030075 1445 P42126 ECI1 Enoyl-CoA delta isomerase 1, mitochondrial yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 70.407 70.714 2 0.00014943 80640 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.942 55.312 28554000 0 0 0 0 0 0 0 0 0 0 5607100 4934600 0 3517100 14495000 57113 1445 51342 481132;481133;481134;481135 381772;381773;381774 381772 3 VLVEQQQDR Unmodified 1113.5778 0.57783619 2796 Q5TDH0 DDI2 Protein DDI1 homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.017 19.212 2 0.01612 18326 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.81 27.661 71488000 0 0 0 2904000 2367300 6938400 4766300 3340900 3011400 9311800 7862800 7312900 4697400 5441200 13534000 57114 2796 51343 481136;481137;481138;481139;481140;481141;481142;481143;481144;481145;481146;481147 381775 381775 1 VLVFNPEEPDGGFPGLK Unmodified 1813.9251 0.92505073 3205 Q86Y91 KIF18B Kinesin-like protein KIF18B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 88.104 88.246 2 1.4314E-05 102282 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 77.64 68.636 32088000 0 0 0 0 0 3359500 0 3076600 2118400 5311300 4846800 3224800 0 2147200 8003700 57115 3205 51344 481148;481149;481150;481151;481152;481153;481154;481155;481156 381776;381777;381778;381779;381780;381781;381782;381783;381784;381785 381776 9 VLVHPPQDGEDEPTLVQK Unmodified 2000.0215 0.021470309 2630 Q16740 CLPP ATP-dependent Clp protease proteolytic subunit, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 5.12 3.79 4 1 3 1 3 1 1 1 1 62.175 58.736 3 1.1386E-47 72090 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 137.73 127.26 159650000 7825000 129050000 9822400 0 0 0 0 0 0 3350700 3811200 0 0 0 5798700 57116 2630 51345 481157;481158;481159;481160;481161;481162;481163;481164 381786;381787;381788;381789;381790;381791;381792;381793;381794 381790 7 VLVIGAGGLGCELLK Unmodified 1497.8589 0.85888542 3481 Q8TBC4 UBA3 NEDD8-activating enzyme E1 catalytic subunit yes yes 0 0 0 By MS/MS 2 0 1 1 94.009 85.879 2 0.0094404 111195 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.721 55.054 7119700 7119700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57117 3481 51346 481165 381795 381795 1 VLVLDSGNLIAVPDK Unmodified 1551.8872 0.88720866 4766 Q9NZH6 IL37 Interleukin-37 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 84.486 84.558 2 0.00012443 98267 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 87.363 73.67 35713000 0 0 0 5817100 0 0 3835300 3376800 0 4127900 5024900 10245000 3285800 0 0 57118 4766 51347 481166;481167;481168;481169;481170;481171;481172;481173 381796;381797;381798;381799;381800;381801;381802 381801 7 VLVLDTDYK Unmodified 1064.5754 0.57537657 63 CON__P02754 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 61.196 61.437 2 0.0084462 69279 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.598 60.676 + 296030000 0 0 0 0 0 43883000 100480000 17691000 15726000 16887000 28902000 29088000 15363000 10159000 17851000 57119 63 51348 481174;481175;481176;481177;481178;481179;481180;481181;481182;481183 381803;381804;381805;381806;381807;381808;381809;381810;381811 381806 9 VLVLDTDYKK Unmodified 1192.6703 0.67033959 63 CON__P02754 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 2 1 1 1 1 1 1 1 48.295 48.401 3 0.00082185 54429 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 70.1 64.317 + 524150000 0 0 0 34100000 22004000 39234000 179820000 44508000 17772000 35103000 47562000 47785000 33392000 22872000 0 57120 63 51349 481184;481185;481186;481187;481188;481189;481190;481191;481192;481193;481194;481195 381812;381813;381814;381815;381816;381817;381818;381819;381820;381821;381822;381823 381814 11 VLVLGDSGVGK Unmodified 1042.6023 0.60226003 2728 Q5HYI8 RABL3 Rab-like protein 3 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 53.988 54.247 2 0.0016293 60760 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 71.451 19.664 66433000 0 0 0 0 0 4552400 12855000 14568000 5517100 0 12782000 8952600 7206000 0 0 57121 2728 51350 481196;481197;481198;481199;481200;481201;481202 381824;381825;381826 381826 3 VLVLSQDYGK Unmodified 1120.6128 0.61282471 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By matching 2.25 0.433 3 1 1 2 1 59.594 53.908 2 0.0027412 66761 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 101.25 65.897 700540000 33469000 658380000 8692200 0 0 0 0 0 0 0 0 0 0 0 0 57122 2047 51351 481203;481204;481205;481206 381827;381828;381829 381828 3 VLVNDAQK Unmodified 885.49198 0.4919813 2262 Q13263 TRIM28 Transcription intermediary factor 1-beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.834 16.004 2 0.004491 14417 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 131.04 55.726 2498700000 0 0 0 100150000 110230000 173430000 137680000 90789000 91385000 235020000 249610000 373980000 272770000 276060000 387610000 57123 2262 51352 481207;481208;481209;481210;481211;481212;481213;481214;481215;481216;481217;481218 381830;381831;381832;381833;381834;381835;381836;381837;381838;381839;381840;381841;381842;381843;381844;381845 381841 15 VLVNSASAQK Unmodified 1015.5662 0.56620887 456 O75122 CLASP2 CLIP-associating protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.06 18.248 2 0.003743 18904 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 75.378 38.358 77722000 0 0 0 6131800 5611400 5562800 7437700 6409500 4610100 7101600 7424500 7984000 6876900 5809000 6762300 57124 456 51353 481219;481220;481221;481222;481223;481224;481225;481226;481227;481228;481229;481230 381846;381847;381848;381849;381850;381851;381852;381853;381854;381855 381846 6 VLVNVLTSDQTEDVLEAVAAK Unmodified 2213.1791 0.17909316 2483 Q15036 SNX17 Sorting nexin-17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.43 0.495 4 3 2 3 2 96.206 92.344 2;3 1.2562E-47 115090 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 111.95 103.56 30176000 22743000 4859700 2574000 0 0 0 0 0 0 0 0 0 0 0 0 57125 2483 51354 481231;481232;481233;481234;481235;481236;481237 381856;381857;381858;381859;381860;381861;381862 381860 6 VLVPATDR Unmodified 869.49707 0.49706667 1809 P60228 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.589 32.774 2 0.0074646 35898 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 89.55 48.048 214350000 0 0 0 12518000 12737000 14853000 13314000 13708000 6994600 20356000 22931000 26738000 19711000 18997000 31497000 57126 1809 51355 481238;481239;481240;481241;481242;481243;481244;481245;481246;481247;481248;481249 381863;381864;381865;381866;381867;381868;381869 381865 7 VLVPEHEK Unmodified 949.52328 0.52328142 1533 P48147 PREP Prolyl endopeptidase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 23.112 19.17 2 0.01335 23789 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 97.798 59.006 300780000 31385000 152750000 116640000 0 0 0 0 0 0 0 0 0 0 0 0 57127 1533 51356 481250;481251;481252;481253 381870;381871;381872 381870 3 VLVPLAAPSMSVR Unmodified 1338.7693 0.76934213 3968 Q96RK0 CIC Protein capicua homolog yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.784 81.847 2 0.02065 94632 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 49.3 40.342 51119000 0 0 0 1899300 2230000 3553600 2800200 6087500 2997400 3811800 4874600 4462400 2518000 3590900 12293000 57128 3968 51357 481254;481255;481256;481257;481258;481259;481260;481261;481262;481263;481264;481265 381873;381874;381875;381876;381877;381878 381873 6 VLVPLAAPSMSVR Oxidation (M) 1354.7643 0.76425675 3968 Q96RK0 CIC Protein capicua homolog yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 73.607 73.627 2 0.0082451 85555 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 42.001 24.137 33255000 0 0 0 6784700 0 0 0 7752900 0 0 0 10626000 0 8091200 0 57129 3968 51357 481266;481267;481268;481269 381879 381879 5452 1 VLVQNAAGSQEK Unmodified 1242.6568 0.65681479 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 22.163 21.308 2 1.38E-34 22690 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 177.06 137.02 1654700000 15906000 696560000 3320100 43907000 36793000 121790000 68667000 43552000 49670000 112560000 84767000 101690000 70187000 95747000 109630000 57130 5187 51358 481270;481271;481272;481273;481274;481275;481276;481277;481278;481279;481280;481281;481282;481283;481284;481285 381880;381881;381882;381883;381884;381885;381886;381887;381888;381889;381890;381891;381892;381893;381894;381895;381896 381880 17 VLVSPTNPPGATSSCQK Unmodified 1741.8669 0.86688392 430 O60763 USO1 General vesicular transport factor p115 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 44.726 45.073 2 0.0019501 50390 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 57.019 46.788 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57131 430 51359 481286;481287;481288 381897;381898;381899 381897 3 VLVSSGQVDTGQQQAR Unmodified 1671.854 0.85401105 321 O43379 WDR62 WD repeat-containing protein 62 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 13 1 1 1 1 1 1 2 1 1 1 1 1 36.371 36.552 2 1.3259E-23 39316 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 150.06 137.48 47745000 0 0 0 3206500 3160200 3601700 3578900 2982900 2167300 4564900 3449300 5397100 4474100 3906900 7255200 57132 321 51360 481289;481290;481291;481292;481293;481294;481295;481296;481297;481298;481299;481300;481301 381900;381901;381902;381903;381904;381905;381906;381907;381908 381903 6 VLVTGATGLLGR Unmodified 1155.6976 0.69755739 4772 Q9NZL9 MAT2B Methionine adenosyltransferase 2 subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.727 73.793 2 0.0014896 85659 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 81.338 43.251 263140000 0 0 0 7705800 9322700 14842000 11463000 11384000 7450900 16565000 38285000 36038000 14894000 23556000 71634000 57133 4772 51361 481302;481303;481304;481305;481306;481307;481308;481309;481310;481311;481312;481313 381909;381910;381911;381912;381913;381914;381915;381916;381917;381918;381919 381918 11 VLVTTNVCAR Unmodified 1131.607 0.60702783 4655;5016 Q9NUU7;Q9UMR2 DDX19A;DDX19B ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX19B no no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43.125 42.119 2 5.3908E-08 47392 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 153.78 114.99 420210000 26736000 73226000 946460 13469000 14102000 31392000 18241000 17930000 17860000 31293000 31887000 42099000 25507000 25038000 50484000 57134 4655;5016 51362 481314;481315;481316;481317;481318;481319;481320;481321;481322;481323;481324;481325;481326;481327;481328 381920;381921;381922;381923;381924;381925;381926;381927;381928;381929;381930;381931;381932;381933;381934;381935;381936 381929 16 VLVTVEEDDTIMEELVDNHGK Unmodified 2384.1417 0.14172138 4591 Q9NR45 NANS Sialic acid synthase yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 2 2 3 1 93.752 88.001 3 7.2046E-24 112384 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 109.66 102.04 357940000 354070000 3875000 0 0 0 0 0 0 0 0 0 0 0 0 0 57135 4591 51363 481329;481330;481331;481332 381937;381938;381939;381940;381941;381942 381942 6 VLVTVEEDDTIMEELVDNHGK Oxidation (M) 2400.1366 0.136636 4591 Q9NR45 NANS Sialic acid synthase yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 83.628 77.717 3 2.0959E-34 79803 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 119.54 106.31 34633000 34633000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57136 4591 51363 481333;481334 381943;381944 381943 5994 0 VLVTVEEDDTIMEELVDNHGKK Unmodified 2512.2367 0.2366844 4591 Q9NR45 NANS Sialic acid synthase yes yes 0 0 1 By MS/MS 2 0 1 1 92.383 84.252 4 4.2184E-32 109192 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 117.74 115.02 34632000 34632000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57137 4591 51364 481335 381945 381945 1 VLVTVFR Unmodified 832.51707 0.51707383 624 O95163 IKBKAP Elongator complex protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.147 66.234 2 0.040686 75248 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 68.485 31.456 137470000 0 0 0 6599800 7349800 14200000 9762600 7384600 7548100 14494000 12353000 16290000 9960300 12175000 19356000 57138 624 51365 481336;481337;481338;481339;481340;481341;481342;481343;481344;481345;481346;481347 381946 381946 1 VLVTVPLALLQK Unmodified 1292.8432 0.843159 3387 Q8NB78 KDM1B Lysine-specific histone demethylase 1B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 92.944 93.059 2 0.0040657 108330 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 58.676 57.081 13572000 0 0 0 0 0 1172000 0 1488900 0 2287100 0 2005800 879880 1384800 4354000 57139 3387 51366 481348;481349;481350;481351;481352;481353;481354 381947;381948;381949;381950;381951 381951 5 VLVVDQLSMR Unmodified 1158.6431 0.64307898 1857 P61764 STXBP1 Syntaxin-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 74.057 74.221 2 0.036436 85682 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 50.805 33.565 4954800 0 0 0 0 0 1900200 0 0 0 0 0 0 0 0 3054600 57140 1857 51367 481355;481356 381952 381952 1 VLVVHDGFEGLAK Unmodified 1382.7558 0.75580056 861 P08237 PFKM ATP-dependent 6-phosphofructokinase, muscle type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 66.723 66.807 2;3 2.5932E-29 77058 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 152.64 125.31 1509900000 0 0 0 46045000 64734000 138880000 91137000 145120000 100800000 143900000 127370000 201240000 110790000 119480000 220420000 57141 861 51368 481357;481358;481359;481360;481361;481362;481363;481364;481365;481366;481367;481368;481369;481370;481371;481372;481373;481374;481375;481376;481377;481378;481379;481380 381953;381954;381955;381956;381957;381958;381959;381960;381961;381962;381963;381964;381965;381966;381967;381968;381969;381970;381971 381966 14 VLVYELLLGK Unmodified 1145.706 0.70599682 3941 Q96P11 NSUN5 Probable 28S rRNA (cytosine-C(5))-methyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 92.499 92.572 2 0.0084468 107307 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.019 60.019 32798000 0 0 0 747600 1074300 2361800 1549000 2354200 2479100 5387700 3116700 2730700 940780 2954800 7101000 57142 3941 51369 481381;481382;481383;481384;481385;481386;481387;481388;481389;481390;481391;481392 381972;381973;381974;381975;381976;381977;381978;381979;381980;381981 381976 10 VLWLSGLSEPGAAR Unmodified 1454.7882 0.78816332 4410 Q9H5X1 FAM96A MIP18 family protein FAM96A yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 84.729 84.849 2 0.00048945 97966 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.01 27.562 11070000 0 0 0 0 0 0 0 0 0 2140800 0 0 2085200 0 6844200 57143 4410 51370 481393;481394;481395 381982;381983 381982 2 VLYDAEISQIHQSVTDTNVILSMDNSR Oxidation (M) 3063.4819 0.48189348 79 CON__P35908v2;P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 84.043 84.1 3 1.4134E-127 97461 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 164.39 160.16 + 515440000 0 0 0 94912000 17468000 0 0 32901000 22218000 141630000 81254000 52557000 5084600 14500000 52921000 57144 79 51371 481396;481397;481398;481399;481400;481401;481402;481403;481404;481405 381984;381985;381986;381987;381988;381989;381990;381991;381992;381993;381994;381995;381996;381997;381998 381989 118 15 VLYDAEISQIHQSVTDTNVILSMDNSR Unmodified 3047.487 0.48697886 79 CON__P35908v2;P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 0 0 By MS/MS 10 0 1 1 88.056 87.703 3 1.5988E-07 101926 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 40.756 34.033 + 4764400 0 0 0 4764400 0 0 0 0 0 0 0 0 0 0 0 57145 79 51371 481406 381999 381999 1 VLYDAEISQIHQSVTDTNVILSMDNSRNLDLDSIIAEVK Unmodified 4358.1952 0.19516052 79 CON__P35908v2;P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 0 1 By MS/MS 2 0 1 1 98.811 90.68 4 3.3289E-52 116961 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 92.846 89.141 + 40773000 40773000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57146 79 51372 481407 382000;382001 382000 2 VLYDAELSQMQTHVSDTSVVLSMDNNR 2 Oxidation (M) 3083.4176 0.41757866 77 CON__P19013;P19013 KRT4 Keratin, type II cytoskeletal 4 yes no 0 2 0 By MS/MS 10 0 1 1 73.963 74.148 3 2.0051E-14 85296 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 53.475 35.825 + 20261000 0 0 0 0 0 0 0 20261000 0 0 0 0 0 0 0 57147 77 51373 481408 382002 382002 112;113 1 VLYLDAVEYFPDEMQEILDLMTEK Unmodified 2903.3861 0.38605075 4439 Q9H7Z3 NRDE2 Protein NRDE2 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 106.13 97.995 3 0.014104 125760 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 24.351 21.66 5184800 5184800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57148 4439 51374 481409 382003 382003 1 VLYLVQGEK Unmodified 1047.5964 0.59644637 4942 Q9UJW0 DCTN4 Dynactin subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 53.698 53.817 2 0.0034222 60591 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 94.114 66.86 85907000 0 0 0 4257900 5616600 10749000 6667700 6516800 0 8734200 12607000 15989000 0 0 14769000 57149 4942 51375 481410;481411;481412;481413;481414;481415;481416;481417;481418;481419 382004;382005;382006;382007;382008;382009;382010;382011;382012;382013;382014 382009 10 VLYLYQGEK Unmodified 1111.5914 0.59136099 3815 Q96EK7 FAM120B Constitutive coactivator of peroxisome proliferator-activated receptor gamma yes yes 0 0 0 By MS/MS 2 0 1 1 60.13 54.272 2 0.047421 69852 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.696 53.61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57150 3815 51376 481420 382015 382015 1 VLYNDLGAQVTEGK Unmodified 1505.7726 0.77257283 1517 P46939 UTRN Utrophin yes yes 0 0 0 By MS/MS 2 0 1 1 67.934 62.019 2 0.0051993 79464 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.82 67.607 17224000 0 17224000 0 0 0 0 0 0 0 0 0 0 0 0 0 57151 1517 51377 481421 382016 382016 0 VLYNLFTK Unmodified 996.56442 0.56441796 4665;4500 Q9NVD7;Q9HBI1 PARVA;PARVB Alpha-parvin;Beta-parvin no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.05 76.112 2 0.0059797 87144 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 104.75 74.243 135680000 0 0 0 6607100 5068300 15325000 8587700 7948100 5031100 15251000 11817000 14311000 9095700 10246000 26393000 57152 4665;4500 51378 481422;481423;481424;481425;481426;481427;481428;481429;481430;481431;481432;481433 382017;382018;382019;382020;382021;382022;382023;382024;382025;382026;382027;382028 382020 12 VLYPNDNFFEGK Unmodified 1441.6878 0.68778057 828;939 P11216;P11217;P06737 PYGB;PYGM;PYGL Glycogen phosphorylase, brain form;Glycogen phosphorylase, muscle form;Glycogen phosphorylase, liver form no no 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 76.464 76.546 2 0.0033909 88766 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 60.518 55.298 34316000 0 0 0 4276400 0 0 1449300 0 0 0 4924300 5294200 0 3682600 14689000 57153 939;828 51379 481434;481435;481436;481437;481438;481439 382029;382030;382031 382031 3 VLYQVEGFVDK Unmodified 1295.6762 0.67615325 367 O43795 MYO1B Unconventional myosin-Ib yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 74.691 74.149 2 0.00026967 85441 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 110.53 87.105 94774000 0 18886000 0 4186400 0 6962100 5417600 8158600 6937500 7305200 6948500 10871000 5337300 4841200 8922900 57154 367 51380 481440;481441;481442;481443;481444;481445;481446;481447;481448;481449;481450;481451;481452 382032;382033;382034;382035;382036;382037;382038;382039;382040;382041;382042;382043;382044 382042 13 VLYTCFQSIQAQK Unmodified 1584.797 0.79701344 1506 P46736 BRCC3 Lys-63-specific deubiquitinase BRCC36 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 69.694 69.988 2 0.002054 79766 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.434 41.688 6996300 0 0 0 0 0 0 0 0 0 0 0 0 2836600 0 4159700 57155 1506 51381 481453;481454;481455 382045;382046 382045 2 VLYVDDNNENGCELDK Unmodified 1895.8207 0.82072159 1634 P50616 TOB1 Protein Tob1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.402 52.545 2 9.7135E-37 59478 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 194.96 162.63 115380000 0 0 0 4230100 5743400 6387400 8845600 8266400 6590100 13165000 11105000 11853000 10992000 9294300 18909000 57156 1634 51382 481456;481457;481458;481459;481460;481461;481462;481463;481464;481465;481466;481467 382047;382048;382049;382050;382051;382052;382053;382054;382055;382056;382057 382048 11 VLYVQDSLEGEAR Unmodified 1477.7413 0.7412727 1533 P48147 PREP Prolyl endopeptidase yes yes 0 0 0 By MS/MS 10 0 1 1 62.874 63.447 2 0.015721 71833 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.486 35.706 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57157 1533 51383 481468 382058 382058 1 VLYYSATK Unmodified 943.50148 0.50148335 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 34.564 34.631 2 0.010849 38651 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 78.324 42.138 42058000 0 0 0 0 13453000 0 0 0 0 0 0 0 13831000 14774000 0 57158 1201 51384 481469;481470;481471 382059;382060 382060 2 VMAAENIPENPLK Oxidation (M) 1440.7283 0.72826518 1448 P42224 STAT1 Signal transducer and activator of transcription 1-alpha/beta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 60.883 60.006 2 1.9117E-21 75693 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 144.77 126.9 325580000 0 245140000 2819400 6319300 2598600 7489700 5420300 4054800 4755000 7227400 6457900 10197000 5966500 7234300 9897800 57159 1448 51385 481472;481473;481474;481475;481476;481477;481478;481479;481480;481481;481482;481483;481484;481485;481486 382061;382062;382063;382064;382065;382066;382067;382068;382069;382070;382071;382072;382073;382074;382075 382064 2282 15 VMAAENIPENPLK Unmodified 1424.7334 0.73335055 1448 P42224 STAT1 Signal transducer and activator of transcription 1-alpha/beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 69.147 67.882 2 1.0247E-09 86042 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.49 113.37 383380000 0 324730000 0 0 0 9497200 0 0 0 11330000 0 11809000 0 7150800 18864000 57160 1448 51385 481487;481488;481489;481490;481491;481492;481493;481494;481495 382076;382077;382078;382079;382080;382081;382082;382083 382079 7 VMAEANHFIDLSQIPCNGK Oxidation (M) 2159.014 0.013958865 271 O15294 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 75.863 75.436 3 0.00045194 91877 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 49.537 45.876 32111000 0 0 8178700 0 3742900 6383800 3224600 5348400 0 0 0 0 5232300 0 0 57161 271 51386 481496;481497;481498;481499;481500;481501 382084;382085 382084 359 2 VMAEANHFIDLSQIPCNGK Unmodified 2143.019 0.019044243 271 O15294 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 0 0 0 By MS/MS 2 0 1 1 81.214 78.686 3 0.0096454 95514 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 32.091 24.099 2264000 0 0 2264000 0 0 0 0 0 0 0 0 0 0 0 0 57162 271 51386 481502 382086 382086 1 VMAEGTAVLRR Unmodified 1201.6601 0.66012603 5144 Q9Y3A3 MOB4 MOB-like protein phocein yes yes 0 0 1 By matching By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 36.547 36.944 3 0.031599 39546 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 21.671 7.9016 24423000 0 0 0 0 0 3651300 0 0 0 3634800 0 4979600 4847100 0 7310300 57163 5144 51387 481503;481504;481505;481506;481507 382087 382087 1 VMAGSLLLDK Unmodified 1045.5842 0.58416712 3050 Q7L576 CYFIP1 Cytoplasmic FMR1-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 74.667 69.272 2 0.0032899 88162 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.331 80.669 290890000 130040000 145330000 15507000 0 0 0 0 0 0 0 0 0 0 0 0 57164 3050 51388 481508;481509;481510 382088;382089 382088 2 VMAGSLLLDK Oxidation (M) 1061.5791 0.57908174 3050 Q7L576 CYFIP1 Cytoplasmic FMR1-interacting protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 6 2 2 2 64.704 58.712 2 0.010205 79036 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.643 49.903 228530000 66102000 124140000 38288000 0 0 0 0 0 0 0 0 0 0 0 0 57165 3050 51388 481511;481512;481513;481514;481515;481516 382090;382091;382092;382093 382090 4677 4 VMAHSSPQSILDDVAMVLDEEAEVFIVK 2 Oxidation (M) 3103.5094 0.50935378 1596 P49756 RBM25 RNA-binding protein 25 yes yes 0 2 0 By MS/MS 2 0 1 1 105.96 97.827 3 4.1679E-09 125483 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.581 60.038 6040800 6040800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57166 1596 51389 481517 382094 382094 2568;2569 1 VMAHSSPQSILDDVAMVLDEEAEVFIVK Oxidation (M) 3087.5144 0.51443916 1596 P49756 RBM25 RNA-binding protein 25 yes yes 0 1 0 By MS/MS 2 0 1 1 106.11 97.981 3 1.114E-34 125723 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.627 95.799 9183000 9183000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57167 1596 51389 481518 382095;382096 382095 2568;2569 2 VMAHSSPQSILDDVAMVLDEEAEVFIVK Unmodified 3071.5195 0.51952454 1596 P49756 RBM25 RNA-binding protein 25 yes yes 0 0 0 By MS/MS 2 0 1 1 106.3 98.167 3 0.0001262 125958 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 37.808 35.176 3880400 3880400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57168 1596 51389 481519 382097 382097 1 VMALELGPHK Oxidation (M) 1109.5903 0.59031513 3103 Q7Z4W1 DCXR L-xylulose reductase yes yes 0 1 0 By MS/MS By matching By MS/MS 2 0 3 1 1 1 47.608 41.848 2 0.0073151 58088 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.334 61.238 32394000 13871000 15357000 3166200 0 0 0 0 0 0 0 0 0 0 0 0 57169 3103 51390 481520;481521;481522 382098;382099 382098 4714 2 VMALELGPHK Unmodified 1093.5954 0.59540051 3103 Q7Z4W1 DCXR L-xylulose reductase yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 62.06 56.014 2 0.0027166 76036 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.54 87.385 19749000 17053000 0 2695600 0 0 0 0 0 0 0 0 0 0 0 0 57170 3103 51390 481523;481524 382100;382101;382102;382103 382100 4 VMATIEK Unmodified 790.42588 0.42587556 3555 Q8WUZ0 BCL7C B-cell CLL/lymphoma 7 protein family member C yes yes 0 0 0 By MS/MS 2 0 1 1 26.494 22.234 2 0.035514 29352 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.244 54.906 79451000 0 79451000 0 0 0 0 0 0 0 0 0 0 0 0 0 57171 3555 51391 481525 382104 382104 1 VMATTSASLK Unmodified 1007.5321 0.53213155 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 27.805 28.313 2 0.040098 29438 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.021 23.727 12479000 0 0 0 0 0 0 0 0 1914400 0 0 5852400 0 0 4712600 57172 1286 51392 481526;481527;481528 382105 382105 1 VMCIEHEIK Unmodified 1157.5573 0.55730044 1448 P42224 STAT1 Signal transducer and activator of transcription 1-alpha/beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40.379 39.358 3 0.017766 50602 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 55.461 37.949 164490000 8533600 21923000 60589000 2316000 0 7325800 4558700 2917700 3518500 6936900 13934000 5412100 6802600 7394100 12327000 57173 1448 51393 481529;481530;481531;481532;481533;481534;481535;481536;481537;481538;481539;481540;481541;481542 382106;382107;382108 382108 3 VMCIEHEIK Oxidation (M) 1173.5522 0.55221507 1448 P42224 STAT1 Signal transducer and activator of transcription 1-alpha/beta yes yes 0 1 0 By MS/MS 2 0 1 1 29.295 26.142 3 0.032545 33143 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 54.416 37.64 72516000 0 0 72516000 0 0 0 0 0 0 0 0 0 0 0 0 57174 1448 51393 481543 382109 382109 0 VMDDLDRASK Oxidation (M) 1164.5445 0.54448715 1578 P49588 AARS Alanine--tRNA ligase, cytoplasmic yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 15.394 12.073 3 0.0047469 15130 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 73.499 60.884 2291900000 146560000 2059800000 85565000 0 0 0 0 0 0 0 0 0 0 0 0 57175 1578 51394 481544;481545;481546;481547 382110;382111;382112;382113;382114 382112 2543 3 VMDDLDRASK Unmodified 1148.5496 0.54957253 1578 P49588 AARS Alanine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 2 3 2 27.219 22.95 2;3 0.0025787 29020 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 98.048 82.904 1525400000 218920000 1233500000 73060000 0 0 0 0 0 0 0 0 0 0 0 0 57176 1578 51394 481548;481549;481550;481551;481552;481553;481554 382115;382116;382117;382118;382119 382118 2 VMDEVEK Unmodified 848.39497 0.39496937 5141 Q9Y383 LUC7L2 Putative RNA-binding protein Luc7-like 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 16.165 15.608 2 0.017052 15785 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 114.72 68.705 466700000 9972000 111490000 0 25634000 24046000 23744000 24904000 28035000 20896000 39528000 66965000 0 40418000 0 51067000 57177 5141 51395 481555;481556;481557;481558;481559;481560;481561;481562;481563;481564;481565;481566 382120;382121;382122;382123 382123 4 VMDIPYLNLEGPDLQPK Oxidation (M) 1956.9867 0.98666471 662 O95453 PARN Poly(A)-specific ribonuclease PARN yes yes 0 1 0 By matching By MS/MS 10 0 2 1 1 87.656 87.783 2 0.00014453 101483 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.498 53.07 6269900 0 0 0 0 0 0 0 0 0 0 0 0 0 1416300 4853700 57178 662 51396 481567;481568 382124 382124 804 1 VMDVHDGK Unmodified 899.4171 0.41710179 56 CON__P02533;P02533 KRT14 Keratin, type I cytoskeletal 14 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 8.4428 8.4652 2 0.014414 6750 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 70.525 49.97 + 31147000 0 0 0 13839000 1152700 0 975730 5059000 0 0 0 0 10120000 0 0 57179 56 51397 481569;481570;481571;481572;481573 382125;382126;382127;382128 382127 4 VMDVTEDEEEEIK Unmodified 1564.6814 0.68143414 3330;695 Q8N4C8;O95819 MINK1;MAP4K4 Misshapen-like kinase 1;Mitogen-activated protein kinase kinase kinase kinase 4 no no 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 51.931 52.115 2 0.0032921 58752 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 54.471 46.47 39720000 0 0 0 0 6000400 0 4436100 3391400 0 0 9017300 0 3133300 6713000 7028000 57180 3330;695 51398 481574;481575;481576;481577;481578;481579;481580 382129 382129 1 VMEALSLYTK Unmodified 1153.6053 0.60529649 3659 Q92783 STAM Signal transducing adapter molecule 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.2 3.92 3 2 1 1 1 1 1 75.912 70.605 2 0.007958 89079 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.838 74.513 147690000 21938000 121820000 3937700 0 0 0 0 0 0 0 0 0 0 0 0 57181 3659 51399 481581;481582;481583;481584;481585 382130;382131;382132;382133 382130 4 VMEEEGLKDEEK Unmodified 1434.6548 0.65482546 2507 Q15208 STK38 Serine/threonine-protein kinase 38 yes yes 0 0 1 By MS/MS 2.5 0.5 2 2 4 28.804 24.461 2;3 0.0021281 32435 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.185 67.99 55190000 0 55190000 0 0 0 0 0 0 0 0 0 0 0 0 0 57182 2507 51400 481586;481587;481588;481589 382134;382135 382134 1 VMEEEGLKDEEK Oxidation (M) 1450.6497 0.64974008 2507 Q15208 STK38 Serine/threonine-protein kinase 38 yes yes 0 1 1 By MS/MS 2.5 0.5 1 1 2 20.542 16.799 3 0.00022693 22223 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.105 87.159 29112000 0 29112000 0 0 0 0 0 0 0 0 0 0 0 0 0 57183 2507 51400 481590;481591 382136;382137 382136 4113 0 VMEEESTEK Unmodified 1080.4645 0.4645055 2684 Q4G0J3 LARP7 La-related protein 7 yes yes 0 0 0 By MS/MS 2 0 1 1 11.181 7.3074 2 0.046426 11691 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.478 49.876 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57184 2684 51401 481592 382138 382138 1 VMEETLSYLLGR Oxidation (M) 1425.7174 0.71736614 794 P05089 ARG1 Arginase-1 yes yes 0 1 0 By MS/MS 10 0 1 1 81.832 82.023 2 0.0020324 94745 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 61.353 52.17 32408000 0 0 0 0 0 0 0 32408000 0 0 0 0 0 0 0 57185 794 51402 481593 382139 382139 959 1 VMEETLSYLLGRK Oxidation (M) 1553.8123 0.81232916 794 P05089 ARG1 Arginase-1 yes yes 0 1 1 By MS/MS By matching By MS/MS 10 0 3 1 1 1 75.697 75.645 3 7.4735E-06 87160 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 89.629 78.685 32707000 0 0 0 8926100 0 0 2578100 21202000 0 0 0 0 0 0 0 57186 794 51403 481594;481595;481596 382140;382141;382142;382143 382141 959 4 VMEGTVAAQDEFYR Unmodified 1614.7348 0.73480712 1438 P41240 CSK Tyrosine-protein kinase CSK yes yes 0 0 0 By MS/MS 10 0 1 1 61.792 62.372 2 0.0070929 70533 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.962 60.282 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57187 1438 51404 481597 382144 382144 1 VMEHFIK Oxidation (M) 918.46332 0.4633237 932 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 2 2 2 1 2 1 1 1 2 2 1 2 22.924 23.097 2 0.01563 23843 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 84.244 45.025 376750000 0 0 0 33403000 26674000 28228000 16963000 26697000 11329000 26254000 26011000 44216000 55428000 24787000 56765000 57188 932 51405 481598;481599;481600;481601;481602;481603;481604;481605;481606;481607;481608;481609;481610;481611;481612;481613;481614;481615;481616 382145;382146;382147;382148;382149;382150;382151;382152;382153;382154;382155;382156 382146 1209 11 VMEHFIK Unmodified 902.46841 0.46840908 932 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 34.637 34.82 2 0.023384 39002 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 88.029 31.519 719340000 0 0 0 29227000 20301000 43341000 33292000 0 40696000 55982000 86690000 93194000 78719000 73557000 164340000 57189 932 51405 481617;481618;481619;481620;481621;481622;481623;481624;481625;481626;481627 382157;382158;382159;382160;382161 382160 2 VMEHVYEK Unmodified 1033.4903 0.49026674 3470 Q8TAF3 WDR48 WD repeat-containing protein 48 yes yes 0 0 0 By MS/MS 2 0 1 1 20.744 17.942 2 0.037121 22865 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 71.877 32.915 7530100 0 0 7530100 0 0 0 0 0 0 0 0 0 0 0 0 57190 3470 51406 481628 382162 382162 1 VMEIVDADEK Oxidation (M) 1163.538 0.53800479 5231 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 29.918 30.226 2 0.0018279 32352 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 80.231 56.803 17690000 0 0 0 0 2055300 0 1731300 0 0 0 3734300 3722800 2276300 0 4169900 57191 5231 51407 481629;481630;481631;481632;481633;481634;481635 382163;382164;382165;382166;382167 382166 6633 5 VMEIVDADEK Unmodified 1147.5431 0.54309017 5231 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 45.291 45.679 2 0.0017736 51395 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 102.07 70.838 15266000 0 0 0 0 0 0 0 0 0 6587900 0 6019800 0 2658200 0 57192 5231 51407 481636;481637;481638;481639;481640;481641 382168;382169;382170;382171;382172 382169 5 VMELESK Unmodified 834.4157 0.41570481 1471 P43034 PAFAH1B1 Platelet-activating factor acetylhydrolase IB subunit alpha yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 8.25 3.03 1 3 1 1 1 1 24.877 24.176 2 0.03326 24725 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.138 32.92 40111000 0 6915500 0 0 0 0 0 0 0 0 6434000 0 0 4959100 21802000 57193 1471 51408 481642;481643;481644;481645 382173;382174 382173 2 VMELESK Oxidation (M) 850.41062 0.41061943 1471 P43034 PAFAH1B1 Platelet-activating factor acetylhydrolase IB subunit alpha yes yes 0 1 0 By MS/MS 3 0 1 1 13.058 9.6366 2 0.033691 12228 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 81.784 35.413 6909000 0 6909000 0 0 0 0 0 0 0 0 0 0 0 0 0 57194 1471 51408 481646 382175 382175 1 VMELLVHLNK Oxidation (M) 1210.6744 0.67437911 2828 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog yes yes 0 1 0 By MS/MS By MS/MS 6 4 1 1 1 1 63.531 59.772 3 0.013359 65456 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.528 44.925 6589400 0 0 6589400 0 0 0 0 0 0 0 0 0 0 0 0 57195 2828 51409 481647;481648 382176;382177 382176 4475 1 VMENGLLFK Unmodified 1049.558 0.55795237 3318 Q8N335 GPD1L Glycerol-3-phosphate dehydrogenase 1-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 75.477 70.092 2 0.0088599 91224 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.942 77.221 67652000 6947000 56616000 4089500 0 0 0 0 0 0 0 0 0 0 0 0 57196 3318 51410 481649;481650;481651 382178;382179;382180 382180 3 VMETSAQSSGDHQEQHVSVQEMQELK Oxidation (M) 2957.3131 0.31311359 965 P12270 TPR Nucleoprotein TPR yes yes 0 1 0 By MS/MS 2 0 1 1 54.863 49.058 4 3.0063E-31 63278 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.5 95.521 39499000 0 39499000 0 0 0 0 0 0 0 0 0 0 0 0 0 57197 965 51411 481652 382181 382181 1274 1 VMETSAQSSGDHQEQHVSVQEMQELK Unmodified 2941.3182 0.31819897 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 6 4 3 3 1 2 1 1 1 54.61 52.519 3;4 8.9844E-47 68478 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.11 113.03 110540000 0 25446000 24457000 0 0 0 0 6400100 0 12196000 0 0 0 0 42040000 57198 965 51411 481653;481654;481655;481656;481657;481658 382182;382183;382184;382185 382182 4 VMFDALEQK Unmodified 1079.5321 0.53213155 3903 Q96K76 USP47 Ubiquitin carboxyl-terminal hydrolase 47 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 63.476 63.532 2 0.021912 71861 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 51.864 37.329 17752000 0 0 0 0 1957300 3556800 0 0 0 0 0 0 0 3870400 8367200 57199 3903 51412 481659;481660;481661;481662 382186;382187 382187 2 VMGFLADK Unmodified 879.45242 0.45242467 4963 Q9UKF6 CPSF3 Cleavage and polyadenylation specificity factor subunit 3 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 66.377 59.271 2 0.0215 75723 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.568 39.876 111310000 67981000 43326000 0 0 0 0 0 0 0 0 0 0 0 0 0 57200 4963 51413 481663;481664 382188 382188 1 VMGNDLGFPQQGQISLSSGETDLK Oxidation (M) 2536.2115 0.21153228 775 P04150 NR3C1 Glucocorticoid receptor yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 80.752 80.454 3 1.6173E-35 93175 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 102.21 97.663 301450000 0 76146000 0 0 14620000 13278000 9451400 21170000 14672000 29045000 28360000 32727000 13306000 17926000 30748000 57201 775 51414 481665;481666;481667;481668;481669;481670;481671;481672;481673;481674;481675;481676 382189;382190;382191;382192;382193;382194;382195;382196;382197;382198;382199;382200;382201 382191 934 13 VMGNDLGFPQQGQISLSSGETDLK Unmodified 2520.2166 0.21661766 775 P04150 NR3C1 Glucocorticoid receptor yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 85.842 81.821 3 0.00013629 101576 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 36.231 29.119 95843000 0 95843000 0 0 0 0 0 0 0 0 0 0 0 0 0 57202 775 51414 481677;481678 382202;382203 382202 2 VMGNQVFPEVTR Oxidation (M) 1391.6867 0.68673471 2346 Q13835 PKP1 Plakophilin-1 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 57.033 57.344 2 0.0047934 65106 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 72.321 51.322 11019000 0 0 0 0 0 0 0 0 0 0 3874500 0 7144800 0 0 57203 2346 51415 481679;481680;481681;481682 382204;382205;382206 382205 3823 3 VMGNQVFPEVTR Unmodified 1375.6918 0.69182009 2346 Q13835 PKP1 Plakophilin-1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 66.55 66.472 2 0.00010418 75990 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 105.98 95.452 52837000 0 0 0 13104000 2123500 3498700 0 25099000 0 0 0 4519700 4492200 0 0 57204 2346 51415 481683;481684;481685;481686;481687;481688;481689 382207;382208;382209;382210;382211 382209 5 VMGTFSTVTSTVK Unmodified 1356.6959 0.69590241 863 P08240 SRPR Signal recognition particle receptor subunit alpha yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 69.761 62.669 2 0.013652 82928 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.531 50.488 36486000 15831000 20655000 0 0 0 0 0 0 0 0 0 0 0 0 0 57205 863 51416 481690;481691 382212;382213 382213 2 VMGTFSTVTSTVK Oxidation (M) 1372.6908 0.69081704 863 P08240 SRPR Signal recognition particle receptor subunit alpha yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 58.482 51.454 2 0.018791 66751 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 56.225 41.556 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57206 863 51416 481692;481693 382214;382215 382214 1102 2 VMHETVK Unmodified 842.43202 0.43202358 1702 P52789 HK2 Hexokinase-2 yes yes 0 0 0 By MS/MS 2 0 1 1 9.3642 5.7256 2 0.021122 9389 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.63 64.263 90059000 90059000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57207 1702 51417 481694 382216 382216 1 VMIGENVDEK Oxidation (M) 1148.5383 0.53833914 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 1 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 34.419 29.524 2 0.0086216 38230 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.509 39.062 204780000 198650 204580000 0 0 0 0 0 0 0 0 0 0 0 0 0 57208 1300 51418 481695;481696 382217 382217 1923 1 VMIGENVDEK Unmodified 1132.5434 0.54342452 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 42.022 36.106 2 0.031848 49552 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.246 25.636 262760000 10806000 251950000 0 0 0 0 0 0 0 0 0 0 0 0 0 57209 1300 51418 481697;481698 382218;382219 382219 2 VMISSNAEDAFLIK Unmodified 1536.7858 0.78578005 4689 Q9NW08 POLR3B DNA-directed RNA polymerase III subunit RPC2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 85.166 81.557 2 0.0017579 101451 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.79 82.262 26373000 0 25303000 1070200 0 0 0 0 0 0 0 0 0 0 0 0 57210 4689 51419 481699;481700 382220 382220 1 VMITHCNLNEFK Unmodified 1504.7167 0.71665463 3126 Q86SF2 GALNT7 N-acetylgalactosaminyltransferase 7 yes yes 0 0 0 By MS/MS 2 0 1 1 65.758 57.47 3 0.013855 77181 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.28 41.43 9735000 9735000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57211 3126 51420 481701 382221 382221 1 VMIYQDEVK Oxidation (M) 1139.5533 0.55326092 2911 Q6NZI2 PTRF Polymerase I and transcript release factor yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 40.316 40.08 2 0.003336 44713 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 84.743 64.118 460040000 0 77591000 0 27168000 29973000 29997000 31792000 20054000 19232000 42795000 38149000 48139000 34131000 22332000 38689000 57212 2911 51421 481702;481703;481704;481705;481706;481707;481708;481709;481710;481711;481712;481713;481714 382222;382223;382224;382225;382226;382227;382228;382229;382230;382231;382232;382233;382234;382235;382236 382229 4541 15 VMIYQDEVK Unmodified 1123.5583 0.5583463 2911 Q6NZI2 PTRF Polymerase I and transcript release factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 48.256 47.862 2 0.007234 54453 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 72.968 46.366 454090000 0 173760000 0 16313000 19473000 27934000 24140000 20662000 15331000 0 36172000 44190000 0 26513000 49601000 57213 2911 51421 481715;481716;481717;481718;481719;481720;481721;481722;481723;481724;481725 382237;382238;382239;382240;382241 382241 4 VMLEDGR Unmodified 818.39564 0.39563807 2268 Q13310 PABPC4 Polyadenylate-binding protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 13 1 1 1 1 1 1 1 1 1 1 2 1 23.301 23.515 2 0.034754 24610 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 71.141 45.032 213170000 0 0 0 10593000 11564000 12707000 11414000 13748000 8735200 16740000 21829000 27077000 19598000 25357000 33811000 57214 2268 51422 481726;481727;481728;481729;481730;481731;481732;481733;481734;481735;481736;481737;481738 382242;382243 382242 2 VMLEDGRSK Unmodified 1033.5226 0.5226295 2268 Q13310 PABPC4 Polyadenylate-binding protein 4 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 18.539 15.31 2 0.035271 19047 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 98.299 84.303 43537000 0 28161000 15376000 0 0 0 0 0 0 0 0 0 0 0 0 57215 2268 51423 481739;481740;481741 382244;382245 382244 1 VMLESFIDTQK Oxidation (M) 1325.6537 0.65370325 1590 P49736 MCM2 DNA replication licensing factor MCM2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 2 2 1 1 1 1 1 1 1 73.423 73.612 2 1.2644E-05 83899 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 124.92 101.15 83742000 0 0 0 0 0 4000300 3168100 3824300 0 16320000 26221000 5862300 0 0 24346000 57216 1590 51424 481742;481743;481744;481745;481746;481747;481748;481749;481750;481751;481752 382246;382247;382248;382249;382250;382251;382252;382253;382254;382255 382250 2560 9 VMLESFIDTQK Unmodified 1309.6588 0.65878863 1590 P49736 MCM2 DNA replication licensing factor MCM2 yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 78.278 78.378 2 1.1305E-05 90647 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 138.11 107.86 69298000 0 0 0 0 1484400 6350300 1764200 3684800 0 5219200 5345700 8524500 2636300 5375100 28914000 57217 1590 51424 481753;481754;481755;481756;481757;481758;481759;481760;481761;481762 382256;382257;382258;382259;382260;382261 382258 6 VMLETPEYR Oxidation (M) 1152.5485 0.5485099 4654 Q9NUQ9;Q9H0Q0 FAM49B;FAM49A Protein FAM49B;Protein FAM49A yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 47.86 48.163 2 0.0044774 54250 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 74.127 55.352 78074000 0 0 0 0 0 0 7214400 5413500 0 14137000 13922000 0 10663000 9856900 16866000 57218 4654 51425 481763;481764;481765;481766;481767;481768;481769;481770 382262;382263;382264;382265;382266 382263 6067 5 VMLGETNPADSK Oxidation (M) 1276.5969 0.59691665 1138;1022 P22392;O60361;P15531 NME2;NME2P1;NME1 Nucleoside diphosphate kinase B;Putative nucleoside diphosphate kinase;Nucleoside diphosphate kinase A no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.44 2.04 3 40 1 1 1 2 3 4 4 5 3 3 6 5 1 1 3 33.804 33.783 2 5.8183E-09 34861 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 140.07 127.1 6864200000 0 120440000 1473700 205840000 563940000 836550000 735520000 815820000 1373400000 612250000 590230000 870950000 12207000 31587000 94000000 57219 1138;1022 51426 481771;481772;481773;481774;481775;481776;481777;481778;481779;481780;481781;481782;481783;481784;481785;481786;481787;481788;481789;481790;481791;481792;481793;481794;481795;481796;481797;481798;481799;481800;481801;481802;481803;481804;481805;481806;481807;481808;481809;481810;481811;481812;481813 382267;382268;382269;382270;382271;382272;382273;382274;382275;382276;382277;382278;382279;382280;382281;382282;382283;382284;382285;382286;382287;382288;382289;382290;382291;382292;382293;382294;382295;382296;382297;382298;382299;382300;382301;382302;382303;382304;382305;382306;382307;382308;382309;382310;382311;382312;382313;382314;382315;382316;382317;382318;382319;382320;382321;382322;382323;382324;382325;382326;382327;382328;382329;382330;382331;382332;382333 382328 1420 66 VMLGETNPADSK Unmodified 1260.602 0.60200203 1138;1022 P22392;O60361;P15531 NME2;NME2P1;NME1 Nucleoside diphosphate kinase B;Putative nucleoside diphosphate kinase;Nucleoside diphosphate kinase A no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38.566 37.871 2 1.2878E-08 41512 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 137.95 122.34 10014000000 9195600 194830000 0 247930000 615870000 960490000 863830000 1691500000 1488200000 884480000 1164100000 1559900000 26039000 53614000 254280000 57220 1138;1022 51426 481814;481815;481816;481817;481818;481819;481820;481821;481822;481823;481824;481825;481826;481827 382334;382335;382336;382337;382338;382339;382340;382341;382342;382343;382344;382345;382346;382347;382348;382349;382350;382351;382352;382353;382354;382355;382356;382357;382358;382359;382360;382361 382357 28 VMLGETNPADSKPGTIR Oxidation (M) 1800.904 0.90399771 1138;1022 P22392;O60361;P15531 NME2;NME2P1;NME1 Nucleoside diphosphate kinase B;Putative nucleoside diphosphate kinase;Nucleoside diphosphate kinase A no no 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 51 5 5 5 6 4 6 5 5 5 2 1 2 45.2 45.32 2;3 3.6365E-282 49156 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 249.75 231.62 34686000000 0 0 0 1683300000 3466100000 1519800000 6777500000 4945300000 3576200000 2480300000 3075100000 6255600000 129920000 146770000 630060000 57221 1138;1022 51427 481828;481829;481830;481831;481832;481833;481834;481835;481836;481837;481838;481839;481840;481841;481842;481843;481844;481845;481846;481847;481848;481849;481850;481851;481852;481853;481854;481855;481856;481857;481858;481859;481860;481861;481862;481863;481864;481865;481866;481867;481868;481869;481870;481871;481872;481873;481874;481875;481876;481877;481878 382362;382363;382364;382365;382366;382367;382368;382369;382370;382371;382372;382373;382374;382375;382376;382377;382378;382379;382380;382381;382382;382383;382384;382385;382386;382387;382388;382389;382390;382391;382392;382393;382394;382395;382396;382397;382398;382399;382400;382401;382402;382403;382404;382405;382406;382407;382408;382409;382410;382411;382412;382413;382414;382415 382381 1420 49 VMLGETNPADSKPGTIR Unmodified 1784.9091 0.90908309 1138;1022 P22392;O60361;P15531 NME2;NME2P1;NME1 Nucleoside diphosphate kinase B;Putative nucleoside diphosphate kinase;Nucleoside diphosphate kinase A no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 33 3 3 2 3 4 3 4 3 4 2 2 48.279 48.426 2;3 0 54436 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 254.18 241.23 30030000000 0 0 0 1129600000 2043500000 1105200000 3778100000 5620200000 2234700000 2592600000 4346600000 6274000000 0 167210000 738420000 57222 1138;1022 51427 481879;481880;481881;481882;481883;481884;481885;481886;481887;481888;481889;481890;481891;481892;481893;481894;481895;481896;481897;481898;481899;481900;481901;481902;481903;481904;481905;481906;481907;481908;481909;481910;481911 382416;382417;382418;382419;382420;382421;382422;382423;382424;382425;382426;382427;382428;382429;382430;382431;382432;382433;382434;382435;382436;382437;382438;382439;382440;382441;382442;382443;382444;382445;382446;382447;382448 382443 29 VMLGETVSSETTK Oxidation (M) 1396.6756 0.6755609 3113 Q7Z6J8 UBE3D E3 ubiquitin-protein ligase E3D yes yes 0 1 0 By MS/MS 2 0 1 1 42.91 37.762 2 0.0018399 49168 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.31 70.719 10032000 0 10032000 0 0 0 0 0 0 0 0 0 0 0 0 0 57223 3113 51428 481912 382449 382449 4719 1 VMLLQQGLNDRSDAVK Oxidation (M) 1801.9356 0.93563219 4079 Q9BPX3 NCAPG Condensin complex subunit 3 yes yes 0 1 1 By MS/MS 10 0 1 1 55.304 55.708 3 0.0073889 63162 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 44.925 17.59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57224 4079 51429 481913 382450 382450 5588 1 VMLMASPSMEDLYHK 2 Oxidation (M) 1782.7991 0.79906363 3255 Q8IX12 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.4 3.2 2 8 1 1 1 1 2 1 1 2 66.889 65.97 3 2.2946E-19 76306 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 106.58 99.287 155430000 23329000 0 15090000 0 0 0 16359000 0 0 19832000 0 26215000 17293000 5252700 32055000 57225 3255 51430 481914;481915;481916;481917;481918;481919;481920;481921;481922;481923 382451;382452;382453;382454;382455;382456;382457;382458 382457 4870;4871;4872 8 VMLMASPSMEDLYHK Oxidation (M) 1766.8041 0.80414901 3255 Q8IX12 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 6 15 3 2 1 1 1 1 1 1 2 2 2 2 2 74.763 73.433 3 3.404E-45 93486 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 154.47 148.69 432710000 96964000 125040000 16624000 4445700 3842600 9474100 6890200 20349000 14854000 19281000 21920000 26623000 0 0 66399000 57226 3255 51430 481924;481925;481926;481927;481928;481929;481930;481931;481932;481933;481934;481935;481936;481937;481938;481939;481940;481941;481942;481943;481944 382459;382460;382461;382462;382463;382464;382465;382466;382467;382468 382461 4870;4871;4872 10 VMLMASPSMEDLYHK Unmodified 1750.8092 0.80923439 3255 Q8IX12 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.33 3.77 3 6 1 1 1 1 1 1 1 1 1 79.684 78.079 3 1.4541E-10 98328 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.885 68.771 210730000 78625000 56376000 6383300 0 0 6342500 0 9688000 4052000 0 0 5895700 0 5760700 37610000 57227 3255 51430 481945;481946;481947;481948;481949;481950;481951;481952;481953 382469;382470;382471;382472;382473;382474;382475 382469 7 VMLMASPSMEDLYHK 3 Oxidation (M) 1798.794 0.79397825 3255 Q8IX12 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes yes 0 3 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 51.413 50.059 3 0.00016413 55836 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 68.044 67.145 67667000 0 15338000 6550500 0 9927300 6925700 0 11713000 0 0 0 0 6935900 10277000 0 57228 3255 51430 481954;481955;481956;481957;481958;481959;481960;481961 382476;382477;382478;382479;382480 382479 4870;4871;4872 3 VMLPTGAAFR Unmodified 1061.5692 0.56918576 3063 Q7LFL8 CXXC5 CXXC-type zinc finger protein 5 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 71.258 71.362 2 0.0082115 81405 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.59 36.387 15037000 0 0 0 0 1141500 0 1274200 2759800 0 2404600 0 0 1740400 1865100 3851800 57229 3063 51431 481962;481963;481964;481965;481966;481967;481968 382481;382482;382483 382482 3 VMLPTGAAFR Oxidation (M) 1077.5641 0.56410038 3063 Q7LFL8 CXXC5 CXXC-type zinc finger protein 5 yes yes 0 1 0 By MS/MS 10 0 1 1 65.857 66.018 2 0.025718 75157 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 40.352 30.322 10355000 0 0 0 0 0 0 0 0 10355000 0 0 0 0 0 0 57230 3063 51431 481969 382484 382484 1 VMLTTAGGTK Unmodified 977.52157 0.52156686 5014 Q9UM54 MYO6 Unconventional myosin-VI yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS 10 0 5 1 1 1 1 1 27.773 27.821 2 0.039105 30353 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 40.331 17.402 15612000 0 0 0 2148300 2403900 0 2069300 0 0 3737900 0 5253100 0 0 0 57231 5014 51432 481970;481971;481972;481973;481974 382485 382485 1 VMLVNSMNTVK Unmodified 1234.6414 0.64136442 1073 P18206 VCL Vinculin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 60.702 59.353 2 0.00031818 67203 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 103.7 88.549 192710000 26236000 29870000 0 0 0 12277000 0 0 0 13640000 18518000 15920000 8728100 17407000 50114000 57232 1073 51433 481975;481976;481977;481978;481979;481980;481981;481982;481983;481984;481985 382486;382487;382488;382489;382490;382491;382492;382493;382494;382495 382493 10 VMLVNSMNTVK Oxidation (M) 1250.6363 0.63627905 1073 P18206 VCL Vinculin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 45.967 44.734 2 2.7774E-05 65070 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.3 94.841 49234000 0 31912000 0 0 0 0 0 0 0 3103500 8953000 0 0 5265300 0 57233 1073 51433 481986;481987;481988;481989;481990;481991 382496;382497;382498;382499;382500;382501 382498 1542;1543 6 VMLVNSMNTVK 2 Oxidation (M) 1266.6312 0.63119367 1073 P18206 VCL Vinculin yes yes 0 2 0 By MS/MS By MS/MS 6 4 1 1 1 1 41.099 34.418 2 0.020293 47684 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.823 36.439 4750700 4750700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57234 1073 51433 481992;481993 382502;382503 382502 1542;1543 2 VMMEGGRSK Unmodified 993.47357 0.47357081 958 P11940;Q9H361 PABPC1;PABPC3 Polyadenylate-binding protein 1;Polyadenylate-binding protein 3 yes no 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 10.434 7.3069 2 0.037026 11886 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.798 56.852 403000000 385930000 14594000 2478300 0 0 0 0 0 0 0 0 0 0 0 0 57235 958 51434 481994;481995;481996 382504 382504 0 VMMLVYPEELKPVLTQAK 2 Oxidation (M) 2120.1261 0.12613508 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 2 1 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 80.783 80.868 3 0.0013175 93171 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.186 36.798 29809000 0 0 0 0 3246900 0 0 5654500 3471300 0 0 0 3248800 5049800 9138200 57236 2804 51435 481997;481998;481999;482000;482001;482002 382505;382506 382505 4438;4439 2 VMNHITDGPRK Oxidation (M) 1282.6452 0.64520425 2838 Q63HN8 RNF213 E3 ubiquitin-protein ligase RNF213 yes yes 0 1 1 By MS/MS 2 0 1 1 13.101 9.1057 2 0.022437 13968 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.985 54.891 5425900 5425900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57237 2838 51436 482003 382507 382507 1 VMNLISK Oxidation (M) 819.45242 0.45242467 1625 P50502;Q8NFI4 ST13;ST13P5 Hsc70-interacting protein;Putative protein FAM10A5 yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 6 2 18 2 3 3 2 2 2 2 1 2 1 2 1 1 1 1 27.063 26.003 1;2 0.02617 27291 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 68.915 25.849 1541000000 34544000 839970000 273550000 26629000 21028000 24713000 30750000 12312000 21993000 22504000 69286000 48676000 19372000 33625000 62072000 57238 1625 51437 482004;482005;482006;482007;482008;482009;482010;482011;482012;482013;482014;482015;482016;482017;482018;482019;482020;482021;482022;482023;482024;482025;482026;482027;482028;482029 382508;382509;382510;382511;382512;382513;382514;382515;382516 382513 8 VMNLISK Unmodified 803.45751 0.45751004 1625 P50502;Q8NFI4 ST13;ST13P5 Hsc70-interacting protein;Putative protein FAM10A5 yes no 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 48.2 42.631 2 0.022247 53780 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 107.67 39.275 4514400000 2242500000 2093100000 178850000 0 0 0 0 0 0 0 0 0 0 0 0 57239 1625 51437 482030;482031;482032;482033 382517;382518;382519 382519 3 VMNMEESNNGSLSAEFK 2 Oxidation (M) 1917.8084 0.80844234 1419 P40763 STAT3 Signal transducer and activator of transcription 3 yes yes 0 2 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS 7.86 3.4 1 1 5 2 1 1 1 1 1 47 45.608 2 1.5371E-69 57615 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 167.98 162.71 60451000 0 39479000 0 0 0 6180300 3219900 0 0 3952100 0 0 5117200 2502400 0 57240 1419 51438 482034;482035;482036;482037;482038;482039;482040 382520;382521;382522 382521 2232;2233 3 VMNMEESNNGSLSAEFK Oxidation (M) 1901.8135 0.81352772 1419 P40763 STAT3 Signal transducer and activator of transcription 3 yes yes 0 1 0 By MS/MS 2.4 0.49 3 2 5 58.349 53.011 2 2.3331E-183 66379 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 246.3 242.5 128320000 0 128320000 0 0 0 0 0 0 0 0 0 0 0 0 0 57241 1419 51438 482041;482042;482043;482044;482045 382523;382524;382525 382523 2232;2233 3 VMNMEESNNGSLSAEFK Unmodified 1885.8186 0.8186131 1419 P40763 STAT3 Signal transducer and activator of transcription 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 69.748 64.978 2 5.7652E-63 83293 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 164.48 150.82 100520000 0 99328000 1194200 0 0 0 0 0 0 0 0 0 0 0 0 57242 1419 51438 482046;482047;482048 382526;382527 382526 2 VMPAPPPK Oxidation (M) 851.45751 0.45751004 1166 P23588 EIF4B Eukaryotic translation initiation factor 4B yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.28 1 3 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 20.993 20.729 2 0.0079999 14070 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 75.311 56.626 314220000 52704000 36852000 0 8538100 6933800 8636300 10171000 10133000 11923000 18046000 29065000 39094000 13687000 24690000 43745000 57243 1166 51439 482049;482050;482051;482052;482053;482054;482055;482056;482057;482058;482059;482060;482061;482062;482063;482064 382528;382529;382530;382531;382532;382533;382534;382535;382536;382537;382538;382539;382540;382541 382529 1688 14 VMPAPPPK Unmodified 835.4626 0.46259542 1166 P23588 EIF4B Eukaryotic translation initiation factor 4B yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 25.631 25.851 2 0.020541 27765 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 62.714 49.507 285950000 0 0 0 9000700 11433000 0 15011000 12136000 12599000 19286000 37198000 47757000 15564000 32916000 73050000 57244 1166 51439 482065;482066;482067;482068;482069;482070;482071;482072;482073;482074;482075 382542;382543;382544;382545;382546;382547;382548;382549 382542 8 VMPAQLK Unmodified 785.44695 0.44694536 4011 Q99460 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.338 30.527 2 0.032739 32914 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 72.618 57.598 554540000 0 0 0 35716000 40988000 45722000 12139000 13848000 10940000 84626000 102250000 127700000 13917000 20614000 46073000 57245 4011 51440 482076;482077;482078;482079;482080;482081;482082;482083;482084;482085;482086;482087 382550;382551;382552 382550 3 VMPFSTACNTPLSNFESHQNYK Oxidation (M) 2587.1472 0.14715788 1441 P41252 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 76.957 76.014 3 8.8969E-50 96886 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 127.5 124.5 274720000 167710000 0 0 0 3148200 15875000 0 0 0 11635000 13134000 16834000 0 13268000 33119000 57246 1441 51441 482088;482089;482090;482091;482092;482093;482094;482095 382553;382554;382555;382556;382557;382558;382559;382560;382561 382557 2273 9 VMPFSTACNTPLSNFESHQNYK Unmodified 2571.1522 0.15224326 1441 P41252 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 84.348 80.123 3 3.888E-115 102105 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 150.69 147.59 254240000 190130000 43726000 0 0 0 0 0 0 0 0 0 0 0 0 20387000 57247 1441 51441 482096;482097;482098 382562;382563;382564 382564 3 VMPFVAMIK Oxidation (M) 1050.5606 0.56059491 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 6.57 3.96 6 8 2 2 2 1 1 1 1 1 1 2 78.914 76.42 2 0.0092108 87843 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 58.981 46.774 153860000 71384000 37274000 7425400 0 0 6604900 3472000 0 0 4305800 6283200 0 0 5554800 11557000 57248 4819 51442 482099;482100;482101;482102;482103;482104;482105;482106;482107;482108;482109;482110;482111;482112 382565;382566;382567;382568;382569;382570;382571;382572;382573 382565 6193 9 VMPFVAMIK Unmodified 1034.5657 0.56568029 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 93.26 86.739 2 0.036865 109529 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.659 35.404 76204000 44586000 31617000 0 0 0 0 0 0 0 0 0 0 0 0 0 57249 4819 51442 482113;482114 382574;382575 382574 2 VMPFVAMIK 2 Oxidation (M) 1066.5555 0.55550953 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 2 0 By MS/MS By MS/MS 2 0 2 1 1 67.454 61.433 2 0.026836 76315 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 66.682 53.01 20567000 12890000 0 7676800 0 0 0 0 0 0 0 0 0 0 0 0 57250 4819 51442 482115;482116 382576 382576 6193 0 VMPLIIQGFK Oxidation (M) 1160.6628 0.66275179 1610 P49903 SEPHS1 Selenide, water dikinase 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.08 3.33 2 1 9 2 1 1 1 1 1 1 1 1 1 1 79.869 79.061 2 0.0046245 91561 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 63.48 49.484 139090000 0 24136000 7129700 0 2803900 13636000 0 4885100 0 10727000 16468000 21694000 5295500 10186000 22130000 57251 1610 51443 482117;482118;482119;482120;482121;482122;482123;482124;482125;482126;482127;482128 382577;382578;382579;382580;382581;382582;382583;382584;382585;382586;382587 382586 2589 11 VMPLIIQGFK Unmodified 1144.6678 0.66783717 1610 P49903 SEPHS1 Selenide, water dikinase 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 87.314 86.298 2 0.0070199 100023 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 63.48 59.893 120020000 34303000 32014000 0 1183400 0 3506700 935470 1891100 0 3611200 4746100 5058100 2234700 4666400 25872000 57252 1610 51443 482129;482130;482131;482132;482133;482134;482135;482136;482137;482138;482139;482140 382588;382589;382590;382591;382592;382593;382594;382595 382588 7 VMPQNHSFLENDLK Oxidation (M) 1686.8036 0.80355538 4451 Q9H8K7 C10orf88 Uncharacterized protein C10orf88 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 59.886 53.845 3 0.0041669 73059 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.177 34.664 12359000 9596700 0 2762500 0 0 0 0 0 0 0 0 0 0 0 0 57253 4451 51444 482141;482142 382596 382596 5891 1 VMPQNHSFLENDLK Unmodified 1670.8086 0.80864076 4451 Q9H8K7 C10orf88 Uncharacterized protein C10orf88 yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 66.883 60.863 3 0.032224 81751 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 31.043 19.772 13535000 11665000 0 1869300 0 0 0 0 0 0 0 0 0 0 0 0 57254 4451 51444 482143;482144 382597 382597 1 VMPYVDILFGNETEAATFAREQGFETK Unmodified 3062.4695 0.46953788 1765 P55263 ADK Adenosine kinase yes yes 0 0 1 By MS/MS 2 0 1 1 98.854 90.724 3 0.0056221 117050 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 28.79 22.141 12956000 12956000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57255 1765 51445 482145 382598 382598 1 VMQEEIFGPILPIVPVK Oxidation (M) 1924.0744 0.074357502 1665 P51648 ALDH3A2 Fatty aldehyde dehydrogenase yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 96.343 96.506 2 0.00013841 112285 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 67.153 52.896 10506000 0 0 0 0 0 0 0 948840 871120 3945500 1897500 0 0 0 2843400 57256 1665 51446 482146;482147;482148;482149;482150 382599;382600;382601 382599 2679 3 VMQENSSSFSDLSER Oxidation (M) 1730.7417 0.74174299 3134 Q86TC9 MYPN Myopalladin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 44.607 44.774 2 1.1612E-23 50266 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 118.48 91.81 25635000 0 0 0 0 5696900 0 0 5980700 0 0 0 7318300 0 6639200 0 57257 3134 51447 482151;482152;482153;482154;482155;482156;482157;482158 382602;382603;382604;382605;382606;382607;382608;382609 382606 4760 8 VMQENSSSFSDLSER Unmodified 1714.7468 0.74682837 3134 Q86TC9 MYPN Myopalladin yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 51.559 51.769 2 1.789E-41 57424 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 191.26 129.61 47224000 0 0 0 0 4696400 0 0 6206200 0 0 7693500 0 8438100 5344900 14845000 57258 3134 51447 482159;482160;482161;482162;482163;482164;482165 382610;382611;382612;382613;382614;382615 382611 6 VMQENSSSFSDLSERR Unmodified 1870.8479 0.84793939 3134 Q86TC9 MYPN Myopalladin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.99 46.159 3 1.5743E-06 51632 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 80.706 73.475 165190000 0 0 0 7276800 9193000 14167000 10925000 15934000 10505000 12418000 15392000 17970000 12504000 16267000 22638000 57259 3134 51448 482166;482167;482168;482169;482170;482171;482172;482173;482174;482175;482176;482177 382616;382617;382618;382619;382620;382621;382622;382623;382624;382625;382626;382627;382628;382629;382630 382622 15 VMQENSSSFSDLSERR Oxidation (M) 1886.8429 0.84285402 3134 Q86TC9 MYPN Myopalladin yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 39.309 39.384 3 0.00017968 43664 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 58.885 55.044 71083000 0 0 0 0 10072000 0 14160000 0 0 17601000 0 0 18441000 10808000 0 57260 3134 51448 482178;482179;482180;482181;482182 382631;382632;382633 382632 4760 3 VMQEQGTHPK Unmodified 1153.555 0.55499226 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.28 3.25 6 1 25 2 3 2 3 2 2 2 2 2 2 2 2 2 2 2 6.6012 6.0248 2;3 1.4351E-06 4265 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 143.7 123.18 5343700000 143360000 2558500000 227270000 176320000 232640000 207570000 241290000 175760000 190300000 156580000 287400000 211820000 199630000 133510000 201740000 57261 1356 51449 482183;482184;482185;482186;482187;482188;482189;482190;482191;482192;482193;482194;482195;482196;482197;482198;482199;482200;482201;482202;482203;482204;482205;482206;482207;482208;482209;482210;482211;482212;482213;482214 382634;382635;382636;382637;382638;382639;382640;382641;382642;382643;382644;382645;382646;382647;382648;382649;382650;382651 382635 16 VMQEQGTHPK Oxidation (M) 1169.5499 0.54990688 1356 P35579 MYH9 Myosin-9 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 6.75 3.85 8 2 14 2 5 3 1 2 1 2 2 1 1 1 1 1 1 5.3191 4.0526 2;3 0.00057293 3696 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 115.71 98.475 4358100000 216960000 3739600000 58817000 52426000 58358000 0 0 40872000 569380 72767000 688370 48816000 0 0 68256000 57262 1356 51449 482215;482216;482217;482218;482219;482220;482221;482222;482223;482224;482225;482226;482227;482228;482229;482230;482231;482232;482233;482234;482235;482236;482237;482238 382652;382653;382654;382655;382656;382657;382658;382659;382660;382661;382662;382663;382664;382665;382666 382656 2100 12 VMQPLVQQPILPVVK Oxidation (M) 1704.0008 0.0007986285 2786 Q5T8P6 RBM26 RNA-binding protein 26 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 1 2 2 2 2 2 2 2 2 82.77 82.827 2;3 6.1954E-29 95487 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 143.89 134.24 623910000 0 0 0 27628000 42699000 49863000 23939000 38675000 41014000 64492000 49209000 69650000 64055000 63112000 89573000 57263 2786 51450 482239;482240;482241;482242;482243;482244;482245;482246;482247;482248;482249;482250;482251;482252;482253;482254;482255;482256;482257;482258;482259;482260;482261 382667;382668;382669;382670;382671;382672;382673;382674;382675;382676;382677 382670 4424 11 VMQPLVQQPILPVVK Unmodified 1688.0059 0.0058840064 2786 Q5T8P6 RBM26 RNA-binding protein 26 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 87.09 86.697 2 1.1955E-05 100171 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 104.22 98.22 62118000 0 17032000 0 0 2501300 3677900 1955300 4641600 2491100 5449500 3405000 0 0 4014400 16950000 57264 2786 51450 482262;482263;482264;482265;482266;482267;482268;482269;482270;482271 382678;382679;382680;382681;382682;382683;382684;382685;382686;382687 382682 10 VMQQQQQTTQQQLPQK Oxidation (M) 1956.9687 0.96872323 2539 Q15459 SF3A1 Splicing factor 3A subunit 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.714 22.92 3 8.9341E-08 23883 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 84.753 81.498 464870000 0 0 0 26035000 22176000 34244000 33486000 25936000 25758000 42370000 39222000 63123000 54423000 49462000 48638000 57265 2539 51451 482272;482273;482274;482275;482276;482277;482278;482279;482280;482281;482282;482283 382688;382689;382690;382691;382692;382693;382694;382695;382696;382697;382698;382699 382694 4177 12 VMQQQQQTTQQQLPQK Unmodified 1940.9738 0.97380861 2539 Q15459 SF3A1 Splicing factor 3A subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 2 24 2 2 2 2 2 2 2 2 2 2 2 2 2 28.855 28.692 2;3 4.7462E-72 31057 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 184.24 174.95 1040900000 0 18767000 0 51792000 46760000 61915000 65538000 61190000 50420000 84243000 110900000 114230000 95390000 98541000 181230000 57266 2539 51451 482284;482285;482286;482287;482288;482289;482290;482291;482292;482293;482294;482295;482296;482297;482298;482299;482300;482301;482302;482303;482304;482305;482306;482307;482308;482309 382700;382701;382702;382703;382704;382705;382706;382707;382708;382709;382710;382711;382712;382713;382714;382715;382716;382717;382718;382719 382710 19 VMQVLNADAIVVK Oxidation (M) 1414.7854 0.78538612 3039 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 72.437 71.275 2 3.9092E-13 88927 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.36 107.13 470870000 23405000 319850000 10755000 4295500 5777800 15572000 8414700 4692700 5627700 12532000 12407000 13549000 5583100 8532600 19874000 57267 3039 51452 482310;482311;482312;482313;482314;482315;482316;482317;482318;482319;482320;482321;482322;482323;482324;482325 382720;382721;382722;382723;382724;382725;382726;382727;382728;382729;382730;382731;382732;382733;382734;382735 382723 4648 16 VMQVLNADAIVVK Unmodified 1398.7905 0.7904715 3039 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 3 1 83.35 78.684 2;3 0.00063777 98667 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.169 68.629 852510000 40133000 795060000 17324000 0 0 0 0 0 0 0 0 0 0 0 0 57268 3039 51452 482326;482327;482328;482329;482330 382736;382737;382738;382739;382740 382736 4 VMRDPNGK Unmodified 915.45964 0.45963531 2268 Q13310 PABPC4 Polyadenylate-binding protein 4 yes yes 0 0 1 By MS/MS By MS/MS By matching 2 0 3 1 1 1 6.108 3.1487 2 0.032276 5100 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.72 73.606 120360000 90867000 28145000 1351800 0 0 0 0 0 0 0 0 0 0 0 0 57269 2268 51453 482331;482332;482333 382741 382741 1 VMSEFNNNFR Oxidation (M) 1272.5557 0.55572054 876 P08962 CD63 CD63 antigen yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.724 41.9 2 4.1677E-08 46489 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 153.04 132.71 186790000 0 0 0 12442000 16686000 11491000 14508000 16465000 11895000 16239000 20310000 21186000 20124000 15914000 9534900 57270 876 51454 482334;482335;482336;482337;482338;482339;482340;482341;482342;482343;482344;482345 382742;382743;382744;382745;382746;382747;382748;382749;382750;382751;382752;382753;382754;382755;382756 382750 1127 15 VMSEFNNNFR Unmodified 1256.5608 0.56080592 876 P08962 CD63 CD63 antigen yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.875 52.023 2 9.2376E-17 58855 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 169.57 150.59 275240000 0 0 0 12124000 13619000 17822000 14380000 21746000 15630000 22244000 24971000 35975000 24819000 28056000 43853000 57271 876 51454 482346;482347;482348;482349;482350;482351;482352;482353;482354;482355;482356;482357 382757;382758;382759;382760;382761;382762;382763;382764;382765;382766;382767;382768;382769;382770;382771;382772 382767 15 VMSEFNNNFRQQMENYPK Oxidation (M) 2291.0099 0.0099361194 876 P08962 CD63 CD63 antigen yes yes 0 1 1 By MS/MS 2 0 1 1 71.547 63.28 3 0.0037439 84229 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 41.871 23.575 8391300 8391300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57272 876 51455 482358 382773 382773 1127 1 VMSQEIQEQLHK Unmodified 1468.7344 0.73441319 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 5 15 1 2 2 1 1 1 1 1 1 2 1 1 1 2 2 46.224 45.019 2;3 5.8682E-34 50343 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 143.97 131.42 1051100000 36075000 238440000 140730000 39324000 29080000 59072000 32228000 45063000 44560000 60092000 51243000 66629000 56224000 54567000 97748000 57273 2392 51456 482359;482360;482361;482362;482363;482364;482365;482366;482367;482368;482369;482370;482371;482372;482373;482374;482375;482376;482377;482378 382774;382775;382776;382777;382778;382779;382780;382781;382782;382783;382784;382785;382786;382787;382788;382789;382790;382791;382792;382793;382794;382795;382796;382797;382798;382799;382800;382801 382797 27 VMSQEIQEQLHK Oxidation (M) 1484.7293 0.72932781 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 2 34.027 33.578 2;3 0.0013053 42555 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 73.082 64.569 305570000 0 51888000 78132000 10609000 0 21138000 0 15434000 11336000 16912000 18331000 35132000 0 12270000 34391000 57274 2392 51456 482379;482380;482381;482382;482383;482384;482385;482386;482387;482388;482389;482390 382802;382803;382804;382805;382806;382807;382808;382809 382805 3924 3 VMSQNFTNCHTK Oxidation (M) 1481.6391 0.63913259 2263 Q13283 G3BP1 Ras GTPase-activating protein-binding protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS 7.14 3.79 7 1 14 3 2 3 1 2 2 1 1 2 1 1 1 1 1 16.137 14.928 2;3 2.3391E-06 21686 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 128.85 121.12 809400000 520010000 29037000 77683000 17743000 22649000 23066000 0 11354000 14612000 21045000 15070000 13480000 11633000 9476500 22541000 57275 2263 51457 482391;482392;482393;482394;482395;482396;482397;482398;482399;482400;482401;482402;482403;482404;482405;482406;482407;482408;482409;482410;482411;482412 382810;382811;382812;382813;382814;382815;382816;382817;382818;382819;382820;382821;382822;382823 382817 3694 10 VMSQNFTNCHTK Unmodified 1465.6442 0.64421797 2263 Q13283 G3BP1 Ras GTPase-activating protein-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 6 12 2 2 2 1 1 1 1 1 1 1 1 1 1 1 1 24.518 23.213 2;3 1.8906E-05 33351 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.35 92.521 1427900000 578450000 441870000 78363000 26839000 27551000 20277000 17289000 24450000 16373000 26108000 39211000 42611000 29829000 33421000 25229000 57276 2263 51457 482413;482414;482415;482416;482417;482418;482419;482420;482421;482422;482423;482424;482425;482426;482427;482428;482429;482430 382824;382825;382826;382827;382828;382829;382830;382831;382832;382833;382834;382835;382836;382837 382830 12 VMSVVQTK Oxidation (M) 906.48445 0.48445308 1663 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 15.286 14.621 2 0.0045238 14228 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 93.195 59.68 43867000 0 9426600 0 0 2464200 6168700 0 0 3760100 5320600 4527300 0 6805500 5393800 0 57277 1663 51458 482431;482432;482433;482434;482435;482436;482437;482438;482439 382838;382839;382840;382841;382842;382843 382840 2676 6 VMSVVQTK Unmodified 890.48954 0.48953845 1663 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 27.102 26.828 2 0.0080444 34101 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.27 79.695 138150000 0 44687000 0 0 6701700 12667000 0 10032000 8636200 11492000 14425000 15819000 0 0 13686000 57278 1663 51458 482440;482441;482442;482443;482444;482445;482446;482447;482448 382844;382845 382845 2 VMSVVQTKPVQTSAVTGQASTGPVTQIIQTK Oxidation (M) 3199.7122 0.71222777 1663 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes yes 0 1 1 By MS/MS By matching By MS/MS 10 0 3 1 1 1 75.169 75.35 3 1.9222E-29 87009 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 66.879 61.505 16614000 0 0 0 0 0 0 0 0 0 4618800 3859200 8136300 0 0 0 57279 1663 51459 482449;482450;482451 382846;382847 382847 2676 2 VMTDESGK Unmodified 865.38513 0.38513296 958 P11940;Q9H361 PABPC1;PABPC3 Polyadenylate-binding protein 1;Polyadenylate-binding protein 3 yes no 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 6.5974 3.2597 2 0.039951 6351 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.69 47.167 218430000 21155000 197280000 0 0 0 0 0 0 0 0 0 0 0 0 0 57280 958 51460 482452;482453 382848 382848 1 VMTIPYQPMPASSPVICAGGQDR 2 Oxidation (M) 2506.1655 0.16545048 2520 Q15365 PCBP1 Poly(rC)-binding protein 1 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 73.874 73.934 2;3 5.9767E-67 84650 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 119.01 112.29 1191600000 0 0 0 59454000 77296000 109150000 108140000 75860000 70940000 121120000 114370000 127870000 106820000 113870000 106720000 57281 2520 51461 482454;482455;482456;482457;482458;482459;482460;482461;482462;482463;482464;482465;482466;482467;482468;482469;482470;482471;482472;482473;482474;482475;482476;482477 382849;382850;382851;382852;382853;382854;382855;382856;382857;382858;382859;382860;382861;382862;382863;382864;382865;382866;382867;382868;382869;382870 382856 4149;4150 22 VMTIPYQPMPASSPVICAGGQDR Oxidation (M) 2490.1705 0.17053586 2520 Q15365 PCBP1 Poly(rC)-binding protein 1 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 29 1 3 3 2 3 2 2 2 2 2 3 4 78.932 79.013 2;3 4.1475E-81 90651 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 148.7 144.07 647190000 0 0 0 10343000 29735000 50739000 30912000 75390000 31072000 71942000 63493000 29775000 43766000 59212000 150810000 57282 2520 51461 482478;482479;482480;482481;482482;482483;482484;482485;482486;482487;482488;482489;482490;482491;482492;482493;482494;482495;482496;482497;482498;482499;482500;482501;482502;482503;482504;482505;482506 382871;382872;382873;382874;382875;382876;382877;382878;382879;382880;382881;382882;382883;382884;382885;382886;382887;382888;382889;382890;382891;382892;382893;382894;382895;382896;382897;382898;382899;382900 382879 4149;4150 26 VMTIPYQPMPASSPVICAGGQDR Unmodified 2474.1756 0.17562124 2520 Q15365 PCBP1 Poly(rC)-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 83.25 83.306 3 4.142E-73 95702 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 130.83 130.83 260290000 0 0 0 3128600 9783700 15137000 5870300 20140000 8249700 36352000 24365000 0 8009600 33086000 96172000 57283 2520 51461 482507;482508;482509;482510;482511;482512;482513;482514;482515;482516;482517 382901;382902;382903;382904;382905;382906;382907;382908;382909;382910;382911;382912;382913 382909 13 VMTSGTGAPAK Oxidation (M) 1034.5066 0.50664508 1663 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.65 2.93 2 1 14 2 1 2 2 1 1 1 1 1 1 1 1 1 1 7.796 7.4026 2 0.00017716 4567 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 91.087 68.595 230030000 320120 17006000 0 9590600 10084000 11428000 13903000 13054000 12032000 19803000 41380000 24948000 21778000 17208000 17495000 57284 1663 51462 482518;482519;482520;482521;482522;482523;482524;482525;482526;482527;482528;482529;482530;482531;482532;482533;482534 382914;382915;382916;382917;382918;382919;382920;382921;382922;382923;382924;382925;382926;382927;382928;382929;382930 382923 2677 13 VMTSGTGAPAK Unmodified 1018.5117 0.51173046 1663 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 13.484 12.876 2 2.2778E-07 12571 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 145.17 126.44 525860000 13840000 134800000 0 19231000 23469000 26723000 24175000 26051000 19828000 43360000 37921000 39656000 34639000 35386000 46780000 57285 1663 51462 482535;482536;482537;482538;482539;482540;482541;482542;482543;482544;482545;482546;482547;482548;482549 382931;382932;382933;382934;382935;382936;382937;382938;382939;382940;382941;382942;382943;382944;382945;382946 382934 15 VMTVNYNTHGELGEGARK Oxidation (M) 1990.9531 0.95307317 1998 P82663 MRPS25 28S ribosomal protein S25, mitochondrial yes yes 0 1 1 By MS/MS 2 0 1 1 40.191 33.569 4 0.00061152 46499 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.494 40.116 11689000 11689000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57286 1998 51463 482550 382947 382947 3246 1 VMTVNYNTHGELGEGARK Unmodified 1974.9582 0.95815855 1998 P82663 MRPS25 28S ribosomal protein S25, mitochondrial yes yes 0 0 1 By MS/MS 2 0 1 1 50.396 42.495 4 0.014157 58748 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 36.451 26.663 9655200 9655200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57287 1998 51463 482551 382948 382948 1 VMTVSFHK Oxidation (M) 963.48479 0.48478743 2314;3658;280 Q92769;O15379;Q13547 HDAC2;HDAC3;HDAC1 Histone deacetylase 2;Histone deacetylase 3;Histone deacetylase 1 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 1 2 2 2 1 2 2 2 2 1 1 24.531 24.757 2 0.0060423 26350 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 83.753 64.116 311840000 0 0 0 15927000 12281000 32546000 30666000 30350000 7251900 35558000 34160000 35726000 50672000 10806000 15897000 57288 3658;280;2314 51464 482552;482553;482554;482555;482556;482557;482558;482559;482560;482561;482562;482563;482564;482565;482566;482567;482568;482569;482570 382949;382950;382951;382952;382953;382954;382955;382956;382957;382958;382959;382960 382959 370 9 VMTVSFHK Unmodified 947.48987 0.48987281 2314;3658;280 Q92769;O15379;Q13547 HDAC2;HDAC3;HDAC1 Histone deacetylase 2;Histone deacetylase 3;Histone deacetylase 1 no no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 42.072 41.313 2 0.0067154 40646 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 98.523 62.338 319200000 7761900 0 0 0 0 32142000 39464000 0 24731000 0 55564000 54338000 66309000 38889000 0 57289 3658;280;2314 51464 482571;482572;482573;482574;482575;482576;482577;482578;482579 382961;382962;382963;382964;382965;382966 382965 6 VMVAPISGSVTTGTK Unmodified 1446.7752 0.77521537 2195 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 61.234 60.611 2 0.0048166 68530 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.175 33.086 70399000 0 47335000 0 0 0 2080900 2574600 0 0 2611900 0 3942000 0 3036100 8817900 57290 2195 51465 482580;482581;482582;482583;482584;482585;482586 382967;382968;382969 382969 3 VMVLDFVTPTPLGTR Unmodified 1644.8909 0.89091383 2641 Q16881 TXNRD1 Thioredoxin reductase 1, cytoplasmic yes yes 0 0 0 By MS/MS 10 0 1 1 92.733 92.871 2 0.00061872 107608 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.64 69.127 4652000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4652000 57291 2641 51466 482587 382970 382970 1 VMVLDFVTPTPLGTR Oxidation (M) 1660.8858 0.88582845 2641 Q16881 TXNRD1 Thioredoxin reductase 1, cytoplasmic yes yes 0 1 0 By MS/MS 10 0 1 1 89.127 89.27 2 0.00031511 103233 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.089 45.416 26663000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26663000 57292 2641 51466 482588 382971 382971 4296 0 VMVQINTSGEESK Oxidation (M) 1436.6817 0.68170891 599 O94903 PROSC Proline synthase co-transcribed bacterial homolog protein yes yes 0 1 0 By MS/MS 2 0 1 1 40.262 35.21 2 2.5149E-21 45862 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 143.96 116.48 19847000 0 19847000 0 0 0 0 0 0 0 0 0 0 0 0 0 57293 599 51467 482589 382972 382972 748 1 VMVQINTSGEESK Unmodified 1420.6868 0.68679429 599 O94903 PROSC Proline synthase co-transcribed bacterial homolog protein yes yes 0 0 0 By MS/MS 2 0 2 2 49.09 43.443 2 1.9248E-13 56309 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.51 96.999 20687000 0 20687000 0 0 0 0 0 0 0 0 0 0 0 0 0 57294 599 51467 482590;482591 382973;382974 382973 1 VMVQPINLIFR Oxidation (M) 1344.7588 0.75877744 1889 P62304 SNRPE Small nuclear ribonucleoprotein E yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 89.088 89.159 2 1.8644E-05 103113 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 119.27 106.48 518270000 0 0 0 8030700 17990000 39212000 21303000 39589000 24342000 61355000 37600000 57301000 28643000 40686000 142220000 57295 1889 51468 482592;482593;482594;482595;482596;482597;482598;482599;482600;482601;482602;482603 382975;382976;382977;382978;382979;382980;382981;382982;382983;382984;382985;382986;382987 382978 3061 13 VMVQPINLIFR Unmodified 1328.7639 0.76386282 1889 P62304 SNRPE Small nuclear ribonucleoprotein E yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 92.486 92.577 2 0.049548 107328 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.295 24.661 16863000 0 0 0 0 0 1693300 0 0 0 0 0 0 0 1376300 13793000 57296 1889 51468 482604;482605;482606 382988 382988 1 VMVTDADR Unmodified 905.42767 0.42766648 1977 P78347 GTF2I General transcription factor II-I yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.806 20.009 2 0.0064356 20295 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 120.62 51.231 774970000 0 0 0 55998000 53757000 64249000 41196000 47408000 30820000 81640000 65649000 92443000 80683000 65323000 95806000 57297 1977 51469 482607;482608;482609;482610;482611;482612;482613;482614;482615;482616;482617;482618 382989;382990;382991;382992;382993;382994;382995;382996;382997;382998;382999;383000 382993 12 VMVTDADR Oxidation (M) 921.42258 0.4225811 1977 P78347 GTF2I General transcription factor II-I yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching 10 0 21 2 2 2 3 2 2 1 1 1 2 2 1 14.268 14.379 2 0.021999 13388 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 104.37 54.246 773790000 0 0 0 74246000 76382000 84379000 64129000 51678000 45350000 49777000 43985000 52482000 117860000 75172000 38350000 57298 1977 51469 482619;482620;482621;482622;482623;482624;482625;482626;482627;482628;482629;482630;482631;482632;482633;482634;482635;482636;482637;482638;482639 383001;383002;383003;383004;383005;383006 383002 3189 1 VMVTDADRSILSPGGSCGPIK Unmodified 2159.0715 0.071473744 1977 P78347 GTF2I General transcription factor II-I yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.496 71.568 3 1.6235E-54 82320 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 124.35 107.27 252820000 0 0 0 7925900 8827500 16861000 10139000 17709000 11512000 25089000 31908000 25779000 15943000 23274000 57857000 57299 1977 51470 482640;482641;482642;482643;482644;482645;482646;482647;482648;482649;482650;482651 383007;383008;383009;383010;383011;383012;383013;383014;383015;383016;383017;383018;383019;383020;383021 383014 15 VMVTDADRSILSPGGSCGPIK Oxidation (M) 2175.0664 0.066388366 1977 P78347 GTF2I General transcription factor II-I yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 67.071 67.115 3 1.5807E-28 77159 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 99.86 84.932 436090000 0 0 0 30217000 42531000 51080000 0 30207000 39385000 59897000 0 75663000 0 46069000 61046000 57300 1977 51470 482652;482653;482654;482655;482656;482657;482658;482659;482660 383022;383023;383024;383025;383026;383027;383028;383029 383029 3189 1 VMVTNVTSLLK Oxidation (M) 1219.6846 0.68460945 5187;5201 Q9Y490;Q9Y4G6 TLN1;TLN2 Talin-1;Talin-2 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 78.327 77.298 2 5.2226E-05 89302 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 111.46 102.59 413550000 61341000 55154000 0 10085000 13783000 33436000 18229000 15882000 16235000 34813000 31768000 38833000 20468000 23166000 40360000 57301 5187;5201 51471 482661;482662;482663;482664;482665;482666;482667;482668;482669;482670;482671;482672;482673;482674;482675 383030;383031;383032;383033;383034;383035;383036;383037;383038;383039;383040;383041 383038 6575 12 VMVTNVTSLLK Unmodified 1203.6897 0.68969482 5187;5201 Q9Y490;Q9Y4G6 TLN1;TLN2 Talin-1;Talin-2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82.337 81.32 2 3.826E-09 102031 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 133.13 120.85 423160000 84107000 158660000 3336700 0 5535000 18579000 6423800 9810500 6074200 18607000 18365000 17702000 8282800 13978000 53693000 57302 5187;5201 51471 482676;482677;482678;482679;482680;482681;482682;482683;482684;482685;482686;482687;482688;482689 383042;383043;383044;383045;383046;383047;383048;383049;383050;383051;383052;383053 383044 11 VMVVGPTDVGK Unmodified 1100.59 0.58998078 3695 Q92989 CLP1 Polyribonucleotide 5'-hydroxyl-kinase Clp1 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 56.18 50.366 2 0.03843 65011 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 50.108 32.722 27893000 0 27893000 0 0 0 0 0 0 0 0 0 0 0 0 0 57303 3695 51472 482690;482691 383054;383055 383055 2 VMVVLGPQTGR Unmodified 1155.6434 0.64341333 3686 Q92917 GPKOW G patch domain and KOW motifs-containing protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 59.909 59.664 2 0.013528 67845 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 46.462 25.942 19148000 0 0 0 0 9381600 9765900 0 0 0 0 0 0 0 0 0 57304 3686 51473 482692;482693;482694 383056;383057;383058 383056 3 VMVVLGPQTGR Oxidation (M) 1171.6383 0.63832796 3686 Q92917 GPKOW G patch domain and KOW motifs-containing protein yes yes 0 1 0 By matching By MS/MS 10 0 2 1 1 49.987 49.782 2 0.0033419 54999 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 59.931 40.154 12160000 0 0 0 2177500 0 0 0 0 0 0 0 0 0 9982100 0 57305 3686 51473 482695;482696 383059 383059 5241 1 VMYGFCSVK Unmodified 1089.4987 0.49872293 2621 Q16643 DBN1 Drebrin yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 64.081 56.99 2 0.039846 76270 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.91 45.248 90020000 49294000 40726000 0 0 0 0 0 0 0 0 0 0 0 0 0 57306 2621 51474 482697;482698 383060 383060 1 VMYTPMAPGNYLISVK 2 Oxidation (M) 1814.8947 0.89467858 487 O75369 FLNB Filamin-B yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 79.247 78.675 2 9.9181E-11 90929 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.011 83.268 130190000 7830000 0 0 7721500 5386700 10004000 6708300 8039200 5087100 13027000 14098000 17223000 5353100 9556100 20154000 57307 487 51475 482699;482700;482701;482702;482703;482704;482705;482706;482707;482708;482709;482710;482711 383061;383062;383063;383064;383065;383066;383067;383068;383069;383070;383071;383072;383073 383064 626;627 13 VMYTPMAPGNYLISVK Oxidation (M) 1798.8998 0.89976395 487 O75369 FLNB Filamin-B yes yes 0 1 0 By MS/MS By MS/MS 2 0 3 1 2 87.921 82.006 2 0.0004838 105064 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.326 67.131 51095000 9927300 41168000 0 0 0 0 0 0 0 0 0 0 0 0 0 57308 487 51475 482712;482713;482714 383074;383075;383076 383076 626;627 3 VMYTPMAPGNYLISVK Unmodified 1782.9048 0.90484933 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS 2 0 1 1 91.934 87.024 2 0.0003902 108169 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.888 59.956 20415000 0 20415000 0 0 0 0 0 0 0 0 0 0 0 0 0 57309 487 51475 482715 383077 383077 1 VNAAMNGQLPFAVVGSMDEVK Unmodified 2176.0657 0.065660084 4799 Q9P0V9 SEPT10 Septin-10 yes yes 0 0 0 By MS/MS 2 0 1 1 95.372 90.508 2 9.3616E-13 112224 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.677 66.374 15726000 0 15726000 0 0 0 0 0 0 0 0 0 0 0 0 0 57310 4799 51476 482716 383078 383078 1 VNAAMNGQLPFAVVGSMDEVK 2 Oxidation (M) 2208.0555 0.055489328 4799 Q9P0V9 SEPT10 Septin-10 yes yes 0 2 0 By MS/MS 10 0 1 1 80.074 80.269 2 1.1299E-09 92846 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 73.415 62.937 8979900 0 0 0 0 0 0 0 0 0 0 8979900 0 0 0 0 57311 4799 51476 482717 383079 383079 6158;6159 1 VNAANLPGPK Unmodified 979.54508 0.5450795 2792 Q5TAX3 ZCCHC11 Terminal uridylyltransferase 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 35.592 35.322 2 0.0070643 44559 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.215 54.8 86599000 0 18512000 0 5171300 3804400 0 6407200 5041300 0 8391300 8183400 6468300 5171100 6560400 12888000 57312 2792 51477 482718;482719;482720;482721;482722;482723;482724;482725;482726;482727;482728 383080;383081;383082;383083;383084;383085;383086;383087;383088;383089 383084 10 VNADIEK Unmodified 787.40758 0.40758296 2569 Q15738 NSDHL Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 14.337 14.488 2 0.04393 13978 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 67.032 16.066 218600000 0 0 0 0 0 29370000 35282000 34844000 27675000 0 0 47594000 43837000 0 0 57313 2569 51478 482729;482730;482731;482732;482733;482734 383090 383090 1 VNAEGFSSK Unmodified 937.45051 0.45051041 2970 Q6T4R5 NHS Nance-Horan syndrome protein yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 6 1 1 1 1 1 1 20.918 20.924 2 0.023981 21561 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 50.834 28.703 29933000 0 0 0 4138100 4023600 3833200 4569800 0 0 6629200 0 0 0 6739000 0 57314 2970 51479 482735;482736;482737;482738;482739;482740 383091;383092 383091 2 VNAEGSVDSVFSQVCTHLDALK Unmodified 2375.1427 0.14272443 734 P00568 AK1 Adenylate kinase isoenzyme 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.12 0.331 7 1 2 5 1 96.252 91.104 2;3 4.5833E-89 113171 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 158 144.96 599110000 30162000 565160000 3792800 0 0 0 0 0 0 0 0 0 0 0 0 57315 734 51480 482741;482742;482743;482744;482745;482746;482747;482748 383093;383094;383095;383096;383097;383098;383099 383093 5 VNAIEHVIIPR Unmodified 1259.735 0.73500553 5237 Q9Y5K8 ATP6V1D V-type proton ATPase subunit D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 63.328 63.414 3 0.0012804 72328 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 69.672 42.19 94134000 0 0 0 6053400 3718600 11220000 8844800 0 5016100 12777000 8998400 7723400 8731400 8194000 12857000 57316 5237 51481 482749;482750;482751;482752;482753;482754;482755;482756;482757;482758;482759 383100;383101;383102;383103;383104;383105;383106;383107;383108;383109 383101 10 VNAIPFTYEQLDVLK Unmodified 1748.9349 0.93488713 2285 Q13421 MSLN Mesothelin;Megakaryocyte-potentiating factor;Mesothelin, cleaved form yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 90.945 91.045 2 0.00010417 105564 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.182 67.292 31271000 0 0 0 0 1333600 1293200 1218200 2332600 0 6573000 4822400 3332700 0 0 10365000 57317 2285 51482 482760;482761;482762;482763;482764;482765;482766;482767 383110;383111;383112;383113 383112 4 VNAQFLELYNEEVLDLFDTTRDIDAK Unmodified 3070.5135 0.51351118 3101 Q7Z4S6 KIF21A Kinesin-like protein KIF21A yes yes 0 0 1 By MS/MS 2 0 1 1 101.07 92.944 3 1.7695E-46 119688 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 113.93 107.9 19148000 19148000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57318 3101 51483 482768 383114 383114 1 VNASASSLK Unmodified 875.47125 0.47124585 2626 Q16658 FSCN1 Fascin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.12 3.44 1 3 2 2 3 2 1 1 1 33.446 31.242 2 0.0017488 19104 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 118.5 84.757 2855800000 490540000 2339300000 25977000 0 0 0 0 0 0 0 0 0 0 0 0 57319 2626 51484 482769;482770;482771;482772;482773;482774;482775;482776 383115;383116;383117;383118;383119;383120;383121;383122;383123;383124;383125;383126;383127;383128 383126 14 VNATGPQFVSGVIVK Unmodified 1514.8457 0.84567819 2684 Q4G0J3 LARP7 La-related protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 76.338 75.815 2 3.6313E-27 86694 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 134.75 107.78 476660000 0 187730000 0 11394000 16022000 20743000 21376000 18038000 18009000 28677000 33316000 36741000 23886000 25021000 35712000 57320 2684 51485 482777;482778;482779;482780;482781;482782;482783;482784;482785;482786;482787;482788;482789;482790 383129;383130;383131;383132;383133;383134;383135;383136;383137;383138;383139;383140 383136 12 VNATVPSNMMSVNGQAK Unmodified 1746.8393 0.83928896 4382 Q9H3P7 ACBD3 Golgi resident protein GCP60 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 59.041 58.631 2 6.1909E-46 73726 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.98 120 99498000 0 60642000 0 0 0 2978400 2111400 0 0 5271100 6299700 4747900 2606700 3321100 11520000 57321 4382 51486 482791;482792;482793;482794;482795;482796;482797;482798;482799 383141;383142;383143;383144;383145;383146;383147;383148;383149 383144 9 VNAVPRPIPEK Unmodified 1218.7085 0.70845643 4528 Q9HD45 TM9SF3 Transmembrane 9 superfamily member 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.494 35.676 3 0.0036153 39937 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 59.198 37.826 271150000 0 0 0 18201000 15010000 19898000 19875000 21174000 16730000 18570000 24853000 23094000 28033000 25857000 39854000 57322 4528 51487 482800;482801;482802;482803;482804;482805;482806;482807;482808;482809;482810;482811 383150;383151;383152;383153;383154;383155;383156;383157 383156 4 VNCSFYFK Unmodified 1063.4797 0.47970205 909 P0DN76;Q01081;Q8WU68 U2AF1;U2AF1L4 Splicing factor U2AF 35 kDa subunit;Splicing factor U2AF 26 kDa subunit yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 56.638 56.727 2 0.017693 64070 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 65.252 49.813 84328000 0 0 0 8193900 8268500 0 7343200 0 8963100 0 0 16674000 11280000 8351900 15254000 57323 909 51488 482812;482813;482814;482815;482816;482817;482818;482819 383158;383159;383160;383161 383160 4 VNCTAEVLYPSTGQETAPEVNFTFEGETGK Unmodified 3274.4976 0.49760312 4124 Q9BS40 LXN Latexin yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 88.675 83.269 3 4.6031E-67 104815 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.04 113.44 205650000 8140700 197510000 0 0 0 0 0 0 0 0 0 0 0 0 0 57324 4124 51489 482820;482821;482822 383162;383163;383164;383165 383163 4 VNDDVGIDWTNENDR Unmodified 1760.7602 0.76017024 2406 Q14432 PDE3A cGMP-inhibited 3',5'-cyclic phosphodiesterase A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 63.742 63.827 2 4.2176E-14 73330 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 118.37 103.16 49929000 0 0 0 2958700 3087800 4006600 2500600 4054900 0 3906200 4341600 7203900 4929500 4735700 8203500 57325 2406 51490 482823;482824;482825;482826;482827;482828;482829;482830;482831;482832;482833 383166;383167;383168;383169;383170;383171;383172;383173;383174;383175;383176;383177 383173 12 VNDFLAEIFK Unmodified 1194.6285 0.62847478 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 94.678 94.271 2 0.011737 116373 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.749 55.013 21551000 0 12240000 0 0 0 1234100 0 869360 1005900 1167500 1099300 633530 0 655260 2645700 57326 2361 51491 482834;482835;482836;482837;482838;482839;482840;482841;482842 383178;383179;383180 383179 3 VNDLAATAYK Unmodified 1064.5502 0.55022446 3890 Q96JB2 COG3 Conserved oligomeric Golgi complex subunit 3 yes yes 0 0 0 By MS/MS 2 0 1 1 40.406 35.354 2 0.026414 46068 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.518 38.816 46309000 0 46309000 0 0 0 0 0 0 0 0 0 0 0 0 0 57327 3890 51492 482843 383181 383181 1 VNDNKEPEQIAFQDEDEAQLNK Unmodified 2573.1882 0.1881543 2235 Q13112 CHAF1B Chromatin assembly factor 1 subunit B yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 64.847 59.515 3 0.00024369 76288 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 61.963 54.687 14296000 0 14296000 0 0 0 0 0 0 0 0 0 0 0 0 0 57328 2235 51493 482844;482845 383182;383183 383182 2 VNDQLIAVNGESLLGK Unmodified 1668.9046 0.90464964 3521 Q8TEW0 PARD3 Partitioning defective 3 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.648 81.71 2 0.00088732 94652 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 72.496 47.641 58992000 0 0 0 1365800 3729300 5810700 3765200 3127800 2977300 6929700 5206200 7861300 3257200 7562800 7398600 57329 3521 51494 482846;482847;482848;482849;482850;482851;482852;482853;482854;482855;482856;482857 383184;383185;383186;383187;383188;383189;383190;383191;383192;383193;383194;383195 383190 12 VNDTIQIDLETGK Unmodified 1444.7409 0.74093835 1905 P62701 RPS4X 40S ribosomal protein S4, X isoform yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.77 5 2 11 2 4 1 1 1 1 1 2 1 1 1 1 1 71.248 69.269 2 3.1453E-37 87912 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 218.18 182.67 743910000 72532000 605880000 5206200 0 2131600 3526700 2443500 0 4295500 8153300 6690700 8258600 7550300 6129300 11108000 57330 1905 51495 482858;482859;482860;482861;482862;482863;482864;482865;482866;482867;482868;482869;482870;482871;482872;482873;482874;482875 383196;383197;383198;383199;383200;383201;383202;383203;383204;383205;383206;383207;383208;383209;383210;383211;383212;383213;383214;383215;383216;383217;383218;383219;383220;383221 383202 25 VNDVLIVPYRK Unmodified 1314.766 0.76597131 2456 Q14966 ZNF638 Zinc finger protein 638 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.533 61.633 3 0.0072329 69405 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.254 23.554 146780000 0 0 0 7790200 6571000 10582000 9964200 10827000 8828400 12683000 14849000 17696000 13282000 11958000 21753000 57331 2456 51496 482876;482877;482878;482879;482880;482881;482882;482883;482884;482885;482886;482887 383222;383223;383224;383225;383226;383227 383223 6 VNEAAPEKPQDDSGTAGGISSTSASVNR Unmodified 2744.2849 0.28490823 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.934 39.114 3 2.5078E-60 43430 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 107.75 102.85 167370000 0 0 0 8082600 8493700 12056000 10053000 6953800 5196600 16489000 15844000 27107000 10846000 20006000 26239000 57332 2775 51497 482888;482889;482890;482891;482892;482893;482894;482895;482896;482897;482898;482899 383228;383229;383230;383231;383232;383233;383234;383235;383236;383237;383238;383239;383240;383241;383242;383243 383240 16 VNEAREELMR Unmodified 1245.6136 0.61356977 2011 P84077;P61204 ARF1;ARF3 ADP-ribosylation factor 1;ADP-ribosylation factor 3 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 22 2 2 2 2 1 2 2 2 2 2 1 2 26.057 26.254 2;3 5.0122E-09 28299 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 126.31 83.23 2358100000 0 0 0 194750000 129840000 182710000 179050000 28288000 138630000 244600000 299590000 297710000 199840000 37532000 425540000 57333 2011 51498 482900;482901;482902;482903;482904;482905;482906;482907;482908;482909;482910;482911;482912;482913;482914;482915;482916;482917;482918;482919;482920;482921 383244;383245;383246;383247;383248;383249;383250;383251;383252;383253;383254 383245 3 VNEASGDGDGEDAVVILEK Unmodified 1915.9011 0.9010804 3773 Q96C86 DCPS m7GpppX diphosphatase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 68.739 68.054 2 1.457E-48 77518 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 134.24 93.654 91854000 20743000 0 0 2884900 3373100 7128700 0 0 5881000 8909100 9899500 7667900 4944600 6016700 14406000 57334 3773 51499 482922;482923;482924;482925;482926;482927;482928;482929;482930;482931;482932 383255;383256;383257;383258;383259;383260;383261;383262;383263;383264 383257 10 VNEEQWSLREVVFVEDVK Unmodified 2204.1113 0.11134795 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 0 1 By MS/MS 2 0 1 1 92.995 84.864 3 0.0017399 109927 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.577 43.655 25305000 25305000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57335 619 51500 482933 383265 383265 1 VNEESLDRILK Unmodified 1314.7143 0.71432967 2473 Q15018 FAM175B BRISC complex subunit Abro1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 2 2 68.372 63.11 2;3 2.5315E-05 81051 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.63 69.33 161900000 12427000 99959000 49517000 0 0 0 0 0 0 0 0 0 0 0 0 57336 2473 51501 482934;482935;482936;482937;482938 383266;383267;383268;383269;383270 383266 5 VNEFGESYEEK Unmodified 1329.5725 0.57247604 3904 Q96KA5 CLPTM1L Cleft lip and palate transmembrane protein 1-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.18 37.36 2 0.00052492 40889 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 82.417 60.969 57555000 0 0 0 2530700 4732900 3501300 3564100 4517000 2279900 5191200 4349400 8944600 7949500 3887100 6107500 57337 3904 51502 482939;482940;482941;482942;482943;482944;482945;482946;482947;482948;482949;482950 383271;383272;383273;383274;383275;383276;383277;383278;383279;383280;383281;383282 383280 12 VNEIVETNRPDSK Unmodified 1499.758 0.7579854 2471 Q15008 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.54 3 3 2 21 1 3 1 2 2 2 2 1 2 2 1 2 2 1 2 26.145 25.398 2;3 4.8448E-123 27220 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 211.46 175.04 1651400000 57091000 740130000 25750000 133180000 102600000 123430000 40341000 8154000 30872000 142630000 29497000 38413000 27921000 7440700 143990000 57338 2471 51503 482951;482952;482953;482954;482955;482956;482957;482958;482959;482960;482961;482962;482963;482964;482965;482966;482967;482968;482969;482970;482971;482972;482973;482974;482975;482976 383283;383284;383285;383286;383287;383288;383289;383290;383291;383292;383293;383294;383295;383296;383297;383298;383299;383300;383301 383285 11 VNELRAFVK Unmodified 1074.6186 0.61857879 1625 P50502;Q8NFI4;Q8IZP2 ST13;ST13P5;ST13P4 Hsc70-interacting protein;Putative protein FAM10A5;Putative protein FAM10A4 yes no 0 0 1 By MS/MS 2 0 1 1 60.572 52.331 2 0.021034 71013 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 151.97 108.76 215340000 215340000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57339 1625 51504 482977 383302 383302 0 VNELTGGLEETLK Unmodified 1401.7351 0.73512469 3242 Q8IWJ2 GCC2 GRIP and coiled-coil domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 7.86 3.4 1 1 5 2 1 1 1 1 1 72.562 71.299 2 0.009846 85873 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 59.542 42.106 117780000 0 104060000 0 0 0 0 2023000 3525900 1627200 0 0 0 0 0 6550000 57340 3242 51505 482978;482979;482980;482981;482982;482983;482984 383303;383304;383305;383306 383305 4 VNEMIIGGGMAFTFLK 2 Oxidation (M) 1758.8685 0.86846383 733 P00558 PGK1 Phosphoglycerate kinase 1 yes yes 0 2 0 By MS/MS By MS/MS 2 0 2 1 1 92.413 85.892 2 7.1949E-31 108596 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.37 13.794 125330000 40563000 84769000 0 0 0 0 0 0 0 0 0 0 0 0 0 57341 733 51506 482985;482986 383307;383308;383309 383308 893;894 3 VNEMIIGGGMAFTFLK Oxidation (M) 1742.8735 0.8735492 733 P00558 PGK1 Phosphoglycerate kinase 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 96.049 90.155 2 0.00060243 114106 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.53 11.724 94242000 67434000 26016000 791600 0 0 0 0 0 0 0 0 0 0 0 0 57342 733 51506 482987;482988;482989;482990 383310;383311;383312 383311 893;894 3 VNEMIIGGGMAFTFLK Unmodified 1726.8786 0.87863458 733 P00558 PGK1 Phosphoglycerate kinase 1 yes yes 0 0 0 By MS/MS 2 0 2 2 99.158 91.027 2 0.00045499 117404 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.902 85.093 18690000 18690000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57343 733 51506 482991;482992 383313;383314 383313 2 VNENELLR Unmodified 985.51926 0.51925868 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.63 39.809 2 0.0042793 44170 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 111.29 63.438 477320000 0 0 0 22388000 25082000 34367000 38274000 42197000 37263000 32987000 49099000 52147000 47192000 34587000 61735000 57344 2556 51507 482993;482994;482995;482996;482997;482998;482999;483000;483001;483002;483003;483004 383315;383316;383317;383318;383319;383320;383321;383322;383323;383324;383325 383320 11 VNETTEFLSK Unmodified 1166.5819 0.58191851 4969 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 yes yes 0 0 0 By MS/MS 10 0 1 1 47.794 47.852 2 0.013411 53974 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 51.276 29.976 4545700 0 0 0 0 0 0 4545700 0 0 0 0 0 0 0 0 57345 4969 51508 483005 383326 383326 1 VNEVGVDVNR Unmodified 1099.5622 0.56218613 3038 Q7KZ85 SUPT6H Transcription elongation factor SPT6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 32.789 33.114 2 0.0025237 36146 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 82.749 36.324 51854000 0 0 0 0 2432200 0 0 0 0 6230000 9990400 8321600 5566500 5942300 13371000 57346 3038 51509 483006;483007;483008;483009;483010;483011;483012;483013 383327;383328;383329;383330;383331;383332;383333;383334;383335 383331 9 VNEVLNR Unmodified 842.46102 0.46101552 4263 Q9BZE4 GTPBP4 Nucleolar GTP-binding protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 2 1 1 1 1 1 1 1 1 1 20.338 20.622 2 0.01917 21172 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 110.61 47.897 190130000 0 0 0 0 0 8255600 15945000 14841000 11662000 14482000 18832000 30168000 34308000 18518000 23121000 57347 4263 51510 483014;483015;483016;483017;483018;483019;483020;483021;483022;483023;483024 383336;383337;383338;383339;383340;383341;383342;383343 383338 8 VNEVNQFAAK Unmodified 1118.572 0.57202253 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 33.523 33.772 2 0.0069975 36454 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 63.534 35.438 57455000 0 0 0 0 3124900 6896400 3823000 2825000 0 3787100 7842400 10755000 4355200 4276500 9770300 57348 2344 51511 483025;483026;483027;483028;483029;483030;483031;483032;483033;483034 383344;383345;383346;383347;383348;383349;383350 383350 7 VNFAMNVGK Unmodified 978.49569 0.49568646 1000 P14618 PKM Pyruvate kinase PKM yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.962 53.104 2 3.6072E-51 58741 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 197.17 175.21 2456300000 0 0 0 79224000 95918000 152020000 115830000 141860000 83567000 170590000 268120000 346160000 66401000 174610000 761990000 57349 1000 51512 483035;483036;483037;483038;483039;483040;483041;483042;483043;483044;483045;483046 383351;383352;383353;383354;383355;383356;383357;383358;383359;383360;383361;383362 383354 12 VNFAMNVGK Oxidation (M) 994.4906 0.49060109 1000 P14618 PKM Pyruvate kinase PKM yes yes 0 1 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 35.194 35.464 2 0.00025034 37705 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 147.16 125.86 1483600000 0 0 0 0 99036000 0 171630000 160870000 0 1430100 247180000 286310000 0 126790000 390390000 57350 1000 51512 483047;483048;483049;483050;483051;483052;483053;483054 383363;383364;383365;383366;383367;383368;383369;383370 383364 1355 6 VNFATWNQAR Unmodified 1205.5942 0.59415496 1351 P35269 GTF2F1 General transcription factor IIF subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.035 60.142 2 0.0060629 67983 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 66.435 54.944 217120000 0 0 0 11102000 11460000 16208000 17467000 16699000 13979000 19236000 22785000 25760000 18219000 15465000 28743000 57351 1351 51513 483055;483056;483057;483058;483059;483060;483061;483062;483063;483064;483065;483066 383371;383372;383373 383372 3 VNFDDYTVNLGGLK Unmodified 1553.7726 0.77257283 2125 Q06210 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 83.664 83.725 2 0.00031349 97139 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 78.653 68.648 31764000 0 0 0 0 1127000 0 0 0 0 9297400 8612000 7144700 0 5583500 0 57352 2125 51514 483067;483068;483069;483070;483071 383374;383375;383376;383377 383377 4 VNFEDDSR Unmodified 980.41994 0.41993856 614 O94979 SEC31A Protein transport protein Sec31A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.103 23.309 2 0.024768 23965 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 59.245 41.859 51487000 0 0 0 2167300 2462800 4939300 2997000 2427800 2027000 4133800 4576300 6467000 5316100 4906500 9066600 57353 614 51515 483072;483073;483074;483075;483076;483077;483078;483079;483080;483081;483082;483083 383378;383379;383380;383381;383382 383380 5 VNFEDDSRGK Unmodified 1165.5364 0.53636531 614 O94979 SEC31A Protein transport protein Sec31A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.48 1.83 2 25 2 2 2 2 2 2 2 3 2 2 2 2 2 17.03 16.916 2;3 0.00147 20886 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 102.52 82.22 364500000 0 52328000 0 10578000 12937000 22469000 32034000 19171000 13520000 23996000 30964000 40053000 29222000 24343000 52883000 57354 614 51516 483084;483085;483086;483087;483088;483089;483090;483091;483092;483093;483094;483095;483096;483097;483098;483099;483100;483101;483102;483103;483104;483105;483106;483107;483108;483109;483110 383383;383384;383385;383386;383387;383388;383389;383390;383391 383386 3 VNFGTDFLTAIK Unmodified 1324.7027 0.70270235 2582 Q15813 TBCE Tubulin-specific chaperone E yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 8 3.46 3 9 1 1 1 1 1 1 1 1 1 1 1 1 89.439 88.852 2 0.00086046 102708 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.298 80.078 99635000 0 56493000 2647500 0 1257000 4923000 0 1930000 2479100 6653300 3077600 3611000 0 2647300 13916000 57355 2582 51517 483111;483112;483113;483114;483115;483116;483117;483118;483119;483120;483121;483122 383392;383393;383394;383395;383396;383397 383394 6 VNFIPTGSAFCPVK Unmodified 1535.7806 0.7806351 3171 Q86VQ1 GLCCI1 Glucocorticoid-induced transcript 1 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 82.152 81.518 2 0.0019148 93855 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 58.37 42.363 69274000 13805000 0 0 3173500 3010900 3754900 2930100 4234800 6279500 5290200 7227400 9209400 4689900 5668600 0 57356 3171 51518 483123;483124;483125;483126;483127;483128;483129;483130;483131;483132;483133;483134 383398;383399;383400;383401;383402;383403 383402 6 VNFLPEIITLSK Unmodified 1372.7966 0.79660274 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 94.888 93.699 2 0.00015364 116233 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.734 88.775 243360000 102480000 78989000 4110400 608790 2098500 4522800 2252000 4164900 3883500 9932600 5149200 0 1837400 5613600 17721000 57357 2392 51519 483135;483136;483137;483138;483139;483140;483141;483142;483143;483144;483145;483146;483147;483148;483149 383404;383405;383406;383407;383408;383409;383410;383411;383412;383413 383410 10 VNFPENGFLSPDK Unmodified 1462.7092 0.70924429 1303 P31689 DNAJA1 DnaJ homolog subfamily A member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.39 3.7 5 1 12 1 4 1 1 1 1 1 1 1 1 1 1 1 1 1 78.824 77.485 2 4.934E-13 97517 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 152.04 125.04 2553000000 51265000 1709300000 25477000 36648000 29743000 60145000 43271000 53073000 32901000 64450000 83907000 93407000 59042000 71473000 138930000 57358 1303 51520 483150;483151;483152;483153;483154;483155;483156;483157;483158;483159;483160;483161;483162;483163;483164;483165;483166;483167 383414;383415;383416;383417;383418;383419;383420;383421;383422;383423;383424;383425;383426;383427;383428;383429;383430;383431;383432;383433;383434 383424 20 VNFTEIDK Unmodified 964.48656 0.48656157 3388 Q8NB90 SPATA5 Spermatogenesis-associated protein 5 yes yes 0 0 0 By MS/MS 10 0 1 1 47.493 48.236 2 0.01524 53967 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 69.198 17.625 5959600 0 0 0 0 0 0 0 0 0 0 0 5959600 0 0 0 57359 3388 51521 483168 383435 383435 1 VNFTVDQIR Unmodified 1090.5771 0.57710791 980 P13639 EEF2 Elongation factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.676 61.775 2 1.2871E-13 71194 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 167.9 103.14 2456300000 0 0 0 68959000 59337000 87793000 74862000 75707000 55560000 110110000 331190000 273030000 98414000 352250000 869040000 57360 980 51522 483169;483170;483171;483172;483173;483174;483175;483176;483177;483178;483179;483180 383436;383437;383438;383439;383440;383441;383442;383443;383444;383445;383446;383447;383448;383449;383450 383450 11 VNFTVDQIRAIMDK Oxidation (M) 1664.8556 0.85559095 980 P13639 EEF2 Elongation factor 2 yes yes 0 1 1 By MS/MS By MS/MS 2.5 0.5 2 2 2 2 78.967 73.934 3 0.0015196 95205 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.52 54.035 87119000 53607000 33512000 0 0 0 0 0 0 0 0 0 0 0 0 0 57361 980 51523 483181;483182;483183;483184 383451;383452 383452 1320 2 VNFTVDQIRAIMDK Unmodified 1648.8607 0.86067633 980 P13639 EEF2 Elongation factor 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 90.963 84.45 3 3.9988E-05 106940 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.481 90.413 71355000 17524000 53831000 0 0 0 0 0 0 0 0 0 0 0 0 0 57362 980 51523 483185;483186 383453;383454 383453 2 VNGDASPAAAESGAK Unmodified 1343.6317 0.63172225 1256 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.47 3.93 3 2 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 33.392 33.678 2 4.311E-45 92601 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 158.4 135.66 1217200000 156820000 110100000 0 37706000 36437000 38553000 48616000 38403000 38349000 89060000 189550000 149760000 65715000 86641000 131450000 57363 1256 51524 483187;483188;483189;483190;483191;483192;483193;483194;483195;483196;483197;483198;483199;483200;483201;483202;483203 383455;383456;383457;383458;383459;383460;383461;383462;383463;383464;383465;383466;383467;383468;383469;383470;383471;383472;383473;383474;383475;383476;383477 383466 22 VNGEDPYPHK Unmodified 1154.5356 0.53563702 2485 Q15046 KARS Lysine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.71 5 11 1 2 2 1 1 1 1 1 1 1 1 1 1 1 15.92 15.002 2;3 5.577E-09 19230 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 158.87 144.2 723640000 9183500 567840000 19532000 4934100 3992100 8880100 7435500 5651300 3324400 8164900 0 18833000 14361000 18127000 33386000 57364 2485 51525 483204;483205;483206;483207;483208;483209;483210;483211;483212;483213;483214;483215;483216;483217;483218;483219 383478;383479;383480;383481;383482;383483 383479 6 VNGGLNLSR Unmodified 928.50903 0.50902834 275 O15355 PPM1G Protein phosphatase 1G yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 33.264 33.431 2 0.017188 35316 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.898 18.909 144680000 0 0 0 16866000 0 18495000 18508000 0 0 0 0 0 31413000 27094000 32302000 57365 275 51526 483220;483221;483222;483223;483224;483225 383484;383485 383484 2 VNGLPPEIAAVPELAK Unmodified 1616.9138 0.91375776 3974 Q96RS0 TGS1 Trimethylguanosine synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 85.97 86.077 2 0.011288 99714 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 36.284 23.708 37482000 0 0 0 0 2743200 2666400 2147300 2486500 4402800 4085100 3948600 4826000 2847600 2771100 4557200 57366 3974 51527 483226;483227;483228;483229;483230;483231;483232;483233;483234;483235;483236 383486;383487 383486 2 VNGLTTVALK Unmodified 1014.6073 0.6073454 3208 Q86YP4 GATAD2A Transcriptional repressor p66-alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 54.835 54.974 2 0.01418 62785 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 50.834 20.649 88332000 0 0 0 6219100 4047500 0 6866700 5306100 4316400 7646900 11450000 8847700 6609100 8143200 18880000 57367 3208 51528 483237;483238;483239;483240;483241;483242;483243;483244;483245;483246;483247 383488;383489 383489 2 VNGRPLEMIEPR Unmodified 1409.7449 0.74491829 1879 P62249 RPS16 40S ribosomal protein S16 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 57.103 56.581 3 0.0013152 62729 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.754 39.472 515760000 26847000 0 0 25993000 20323000 32768000 25225000 31572000 25094000 36669000 41170000 62125000 39100000 51695000 97174000 57368 1879 51529 483248;483249;483250;483251;483252;483253;483254;483255;483256;483257;483258;483259;483260 383490;383491;383492;383493;383494;383495;383496;383497;383498;383499;383500;383501;383502 383493 7 VNGRPLEMIEPR Oxidation (M) 1425.7398 0.73983291 1879 P62249 RPS16 40S ribosomal protein S16 yes yes 0 1 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 1 1 2 2 2 2 2 1 2 2 42.163 42.343 3 0.00042231 46828 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 69.602 41.74 1043700000 0 0 0 75896000 68437000 45410000 38819000 64375000 63088000 113560000 120320000 146110000 81355000 101290000 125040000 57369 1879 51529 483261;483262;483263;483264;483265;483266;483267;483268;483269;483270;483271;483272;483273;483274;483275;483276;483277;483278;483279;483280;483281 383503;383504;383505;383506;383507;383508;383509;383510;383511;383512;383513;383514;383515;383516;383517;383518 383507 3048 10 VNGSYEALSGGSTSEGFEDFTGGVTEWYELRK Unmodified 3471.5743 0.57427354 841 P07384 CAPN1 Calpain-1 catalytic subunit yes yes 0 0 1 By MS/MS 2 0 1 1 95.415 87.284 3 1.6111E-29 112866 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.793 84.704 26412000 26412000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57370 841 51530 483282 383519 383519 1 VNGTLVTHSNHLEVVK Unmodified 1745.9424 0.94243213 4778 Q9NZN5 ARHGEF12 Rho guanine nucleotide exchange factor 12 yes yes 0 0 0 By MS/MS 2 0 1 1 55.577 47.429 3 0.0050521 64881 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.861 32.34 16791000 16791000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57371 4778 51531 483283 383520 383520 1 VNGTTVSSPSTSLQR Unmodified 1532.7794 0.77944912 952 P11532 DMD Dystrophin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 36.724 36.975 2 0.0012694 41478 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 57.019 44.063 26802000 0 0 0 2528100 0 3786800 2716500 0 0 4263100 3263300 4671900 0 2091700 3480600 57372 952 51532 483284;483285;483286;483287;483288;483289;483290;483291 383521;383522;383523;383524;383525;383526 383526 6 VNGVDDAANFR Unmodified 1176.5523 0.55234972 367 O43795 MYO1B Unconventional myosin-Ib yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.451 40.63 2 0.00060344 45172 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 93.111 83.896 85258000 0 0 0 4936300 5920400 6497700 7499600 7935300 3956800 6661500 8980300 11351000 7956400 6218600 7343600 57373 367 51533 483292;483293;483294;483295;483296;483297;483298;483299;483300;483301;483302;483303 383527;383528;383529;383530;383531;383532;383533;383534;383535;383536;383537 383528 11 VNHAVLAVGYGEK Unmodified 1355.7197 0.7197494 893 P09668 CTSH Pro-cathepsin H;Cathepsin H mini chain;Cathepsin H;Cathepsin H heavy chain;Cathepsin H light chain yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 43.497 43.524 3 0.0017118 49389 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 57.434 46.221 37375000 0 0 0 17104000 0 0 0 7272700 0 0 12999000 0 0 0 0 57374 893 51534 483304;483305;483306 383538 383538 1 VNHEPEPAGGATPGATLPK Unmodified 1841.9272 0.92717599 162 O00499 BIN1 Myc box-dependent-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.586 41.764 3 2.6508E-05 46647 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 63.447 58.343 376950000 0 0 0 14533000 16618000 25682000 21745000 22609000 16997000 32759000 44600000 42211000 34608000 30476000 74118000 57375 162 51535 483307;483308;483309;483310;483311;483312;483313;483314;483315;483316;483317;483318 383539;383540;383541;383542;383543;383544;383545;383546;383547;383548;383549;383550 383539 12 VNHIVTTK Unmodified 910.52362 0.52361577 4997 Q9ULJ3 ZBTB21 Zinc finger and BTB domain-containing protein 21 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 12.852 9.6675 2 0.01665 14980 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 91.783 56.582 58642000 36856000 9990500 11796000 0 0 0 0 0 0 0 0 0 0 0 0 57376 4997 51536 483319;483320;483321 383551;383552;383553 383552 2 VNHSRGTEVSEPSPPVRDPEGVTQAPGVEPSNGLEK Unmodified 3751.8402 0.84015848 5228 Q9Y5B0 CTDP1 RNA polymerase II subunit A C-terminal domain phosphatase yes yes 0 0 2 By MS/MS 2 0 1 1 66.222 57.928 5 1.1844E-17 77693 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.252 47.031 35284000 35284000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57377 5228 51537 483322 383554;383555 383555 2 VNHVTLSQPK Unmodified 1121.6193 0.61930707 1858 P61769 B2M Beta-2-microglobulin;Beta-2-microglobulin form pI 5.3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 22.838 22.292 2 0.0011176 22365 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 109.66 81.49 151980000 15673000 0 4006200 10461000 7671500 7330300 7832300 7878900 5714900 0 16674000 24649000 14003000 0 30084000 57378 1858 51538 483323;483324;483325;483326;483327;483328;483329;483330;483331;483332;483333;483334 383556;383557;383558;383559;383560;383561;383562;383563;383564 383562 9 VNIAFNYDMPEDSDTYLHR Oxidation (M) 2315.0165 0.016461285 2347 Q13838 DDX39B Spliceosome RNA helicase DDX39B yes yes 0 1 0 By MS/MS By matching By matching By MS/MS By matching 10 0 5 1 1 1 1 1 76.276 76.419 3 0.0002082 88145 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 54.764 51.427 60874000 0 0 0 0 0 12099000 0 0 0 12191000 0 8977700 0 4749400 22857000 57379 2347 51539 483335;483336;483337;483338;483339 383565 383565 3830 0 VNIDFEPFK Unmodified 1107.5601 0.56006086 1902 P62495 ETF1 Eukaryotic peptide chain release factor subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 81.158 80.637 2 0.0031541 92863 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 92.439 76.777 250210000 0 120320000 0 2235500 2672300 26819000 4341000 4126900 9771200 10137000 10176000 10813000 6068400 8742800 33989000 57380 1902 51540 483340;483341;483342;483343;483344;483345;483346;483347;483348;483349;483350;483351;483352;483353 383566;383567;383568;383569;383570;383571;383572;383573;383574;383575;383576;383577;383578 383570 13 VNIEAVGGEK Unmodified 1014.5346 0.53457439 2792 Q5TAX3 ZCCHC11 Terminal uridylyltransferase 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 36.371 36.149 2 0.0024631 38726 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 83.358 55.653 154700000 0 24073000 0 6392300 5806700 10724000 9710900 8990100 6346000 12589000 15749000 13291000 10877000 12882000 17268000 57381 2792 51541 483354;483355;483356;483357;483358;483359;483360;483361;483362;483363;483364;483365;483366 383579;383580;383581;383582;383583;383584;383585;383586;383587;383588;383589 383588 11 VNIFGEELER Unmodified 1204.6088 0.60880197 1634 P50616 TOB1 Protein Tob1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 74.979 75.11 2 0.01226 86670 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 52.79 24.391 41737000 0 0 0 0 0 4818100 4388700 5829200 3725500 7790500 6699200 0 4194000 4292300 0 57382 1634 51542 483367;483368;483369;483370;483371;483372;483373;483374 383590;383591 383590 2 VNIFGVESGK Unmodified 1048.5553 0.55530983 4304 Q9GZS3 WDR61 WD repeat-containing protein 61;WD repeat-containing protein 61, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 64.961 63.497 2 0.0027291 72337 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 80.688 49.952 675550000 43432000 441340000 27439000 0 0 11856000 0 10386000 7804300 21595000 20915000 0 22174000 22185000 46421000 57383 4304 51543 483375;483376;483377;483378;483379;483380;483381;483382;483383;483384;483385 383592;383593;383594;383595;383596;383597;383598;383599;383600;383601;383602;383603 383593 10 VNIFGVESGKK Unmodified 1176.6503 0.65027285 4304 Q9GZS3 WDR61 WD repeat-containing protein 61;WD repeat-containing protein 61, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 51.727 50.652 3 0.0083596 55198 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.449 23.536 224900000 79757000 11523000 0 0 9777300 0 7393600 12037000 0 11444000 12382000 26228000 13075000 12407000 28876000 57384 4304 51544 483386;483387;483388;483389;483390;483391;483392;483393;483394;483395;483396 383604;383605;383606 383604 3 VNIGEVLDK Unmodified 985.54441 0.5444108 2308 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 62.633 62.781 2 0.045169 71406 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 43.272 13.087 135010000 0 0 0 0 10202000 12254000 11509000 11252000 7975200 18262000 0 18826000 18245000 12613000 13873000 57385 2308 51545 483397;483398;483399;483400;483401;483402;483403;483404;483405;483406 383607 383607 1 VNIGMIDQSRDASAVSLSESK Unmodified 2206.09 0.089960579 1454 P42345 MTOR Serine/threonine-protein kinase mTOR yes yes 0 0 1 By MS/MS 2 0 1 1 73.916 70.964 3 0.012666 86748 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 42.64 32.718 1988000 0 0 1988000 0 0 0 0 0 0 0 0 0 0 0 0 57386 1454 51546 483407 383608 383608 0 VNIIGEVVDQGSTNLK Unmodified 1684.8996 0.89956426 4874 Q9UEY8 ADD3 Gamma-adducin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.91 3.42 4 2 16 4 2 1 1 2 2 2 2 1 2 1 2 83.256 82.345 2;3 4.4044E-46 101985 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.13 100.34 294270000 0 194750000 10122000 0 3362100 3201900 5928200 7932100 0 14338000 10989000 4575400 2633700 4909500 31526000 57387 4874 51547 483408;483409;483410;483411;483412;483413;483414;483415;483416;483417;483418;483419;483420;483421;483422;483423;483424;483425;483426;483427;483428;483429 383609;383610;383611;383612;383613;383614;383615;383616;383617;383618;383619;383620;383621;383622;383623;383624 383612 13 VNIIPLIAK Unmodified 979.643 0.64300263 2596 Q16181 SEPT7 Septin-7 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 6 24 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 82.814 81.836 2 0.0085848 95682 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 69.198 0 919300000 155330000 129050000 19258000 18605000 23035000 38383000 30559000 35748000 25223000 54408000 122170000 63225000 46438000 48299000 109560000 57388 2596 51548 483430;483431;483432;483433;483434;483435;483436;483437;483438;483439;483440;483441;483442;483443;483444;483445;483446;483447;483448;483449;483450;483451;483452;483453;483454;483455;483456;483457;483458;483459 383625;383626;383627;383628;383629;383630;383631;383632;383633;383634;383635;383636;383637;383638;383639;383640;383641;383642;383643;383644;383645;383646;383647;383648 383639 24 VNIIPVIAK Unmodified 965.62735 0.62735256 4799 Q9P0V9 SEPT10 Septin-10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77.291 76.822 2 0.01094 88496 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 63.565 7.889 246420000 0 51445000 4013500 6493700 9524600 10793000 10924000 11197000 7402600 18125000 49902000 19335000 11284000 14700000 21277000 57389 4799 51549 483460;483461;483462;483463;483464;483465;483466;483467;483468;483469;483470;483471;483472;483473 383649;383650;383651;383652;383653;383654;383655;383656;383657;383658;383659 383655 11 VNIIQFGTGYK Unmodified 1238.6659 0.66592292 4969 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 76.455 75.886 2 0.00046254 87815 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 99.815 75.039 79556000 14991000 0 0 2496300 3204700 4605600 3368400 5815400 3626200 7285200 7128200 7050000 4406900 4907000 10671000 57390 4969 51550 483474;483475;483476;483477;483478;483479;483480;483481;483482;483483;483484;483485;483486 383660;383661;383662;383663;383664;383665;383666;383667;383668;383669;383670;383671;383672;383673 383666 14 VNIISVTNK Unmodified 986.57605 0.57604528 4242 Q9BY44 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 50.771 49.214 2 0.00048382 60826 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 127.46 69.65 1140900000 393860000 572140000 18367000 10980000 7281000 18227000 12319000 10423000 0 15073000 18844000 0 14933000 16608000 31851000 57391 4242 51551 483487;483488;483489;483490;483491;483492;483493;483494;483495;483496;483497;483498;483499;483500 383674;383675;383676;383677;383678;383679;383680;383681;383682;383683;383684;383685;383686;383687 383679 14 VNILFDFVK Unmodified 1093.6172 0.61718181 1751 P55010 EIF5 Eukaryotic translation initiation factor 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 91.693 91.801 2 0.005211 106356 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.165 64.529 12627000 0 0 0 0 405070 1093300 564310 664810 1227200 1385600 1351400 723990 631480 1167400 3412100 57392 1751 51552 483501;483502;483503;483504;483505;483506;483507;483508;483509;483510;483511 383688 383688 1 VNINNSMPPGR Oxidation (M) 1213.5874 0.58735502 3662 Q92793 CREBBP CREB-binding protein yes yes 0 1 0 By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 2 24.876 25.177 2 0.0053591 26725 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 52.278 34.053 32573000 0 0 0 0 3052300 0 0 0 2868300 5967200 4070400 5566000 0 3063200 7985500 57393 3662 51553 483512;483513;483514;483515;483516;483517;483518;483519 383689;383690;383691 383689 5192 3 VNIVPVIAK Unmodified 951.6117 0.6117025 2474 Q15019 SEPT2 Septin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.912 68.992 2 0.019227 78921 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 54.157 16.599 475850000 0 0 0 21445000 23670000 36417000 28592000 28219000 21270000 45404000 90391000 54674000 29472000 34286000 62007000 57394 2474 51554 483520;483521;483522;483523;483524;483525;483526;483527;483528;483529;483530;483531 383692;383693;383694;383695;383696;383697;383698;383699;383700;383701;383702;383703 383693 12 VNKPPYPK Unmodified 941.53345 0.53345218 986;985 P13797;P13796 PLS3;LCP1 Plastin-3;Plastin-2 no no 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 21.547 17.716 2 0.03675 24876 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.61 90.057 278000000 173270000 69630000 35097000 0 0 0 0 0 0 0 0 0 0 0 0 57395 986;985 51555 483532;483533;483534 383704;383705 383704 0 VNLAELFK Unmodified 932.53312 0.53311783 1263 P30044 PRDX5 Peroxiredoxin-5, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.29 2.76 5 1 1 1 3 2 1 88.233 84.544 2 0.012186 96744 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.213 40.389 2655700000 1088500000 1161800000 228130000 0 0 0 0 0 0 0 0 0 0 0 177220000 57396 1263 51556 483535;483536;483537;483538;483539;483540;483541 383706;383707;383708;383709;383710 383708 5 VNLDSEQAVK Unmodified 1101.5666 0.5666028 2489 Q15054 POLD3 DNA polymerase delta subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 33.643 30.219 2 2.7906E-05 38760 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.66 97.467 181490000 9227100 111390000 0 0 0 0 0 0 0 0 0 60871000 0 0 0 57397 2489 51557 483542;483543;483544 383711;383712;383713 383711 2 VNLEECLK Unmodified 1003.5008 0.50083142 2160 Q08554 DSC1 Desmocollin-1 yes yes 0 0 0 By MS/MS 10 0 1 1 50.011 49.392 2 0.043878 56525 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 49.097 23.203 7469000 0 0 0 7469000 0 0 0 0 0 0 0 0 0 0 0 57398 2160 51558 483545 383714 383714 1 VNLEESSGVENSPAGARPK Unmodified 1939.9599 0.95993268 3564 Q8WVM8 SCFD1 Sec1 family domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 39.296 39.421 3 8.3323E-24 43782 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 98.165 80.676 81408000 0 0 0 4818500 4648100 9000500 4286900 0 6250500 11396000 9801400 0 7461500 7398400 16345000 57399 3564 51559 483546;483547;483548;483549;483550;483551;483552;483553;483554;483555;483556 383715;383716;383717;383718;383719;383720;383721;383722;383723;383724;383725;383726 383716 12 VNLEVIK Unmodified 813.496 0.49600404 3279 Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.793 52.936 2 0.023435 59971 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 85.265 27.098 423000000 0 0 0 13719000 2010200 47303000 20455000 15613000 39847000 29838000 58787000 63736000 48117000 24025000 59546000 57400 3279 51560 483557;483558;483559;483560;483561;483562;483563;483564;483565;483566;483567;483568 383727;383728;383729 383727 3 VNLEYLEGK Unmodified 1063.555 0.55497548 2771 Q5T2E6 C10orf76 UPF0668 protein C10orf76 yes yes 0 0 0 By MS/MS 10 0 1 1 61.157 61.737 2 0.040749 69549 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.318 14.242 26333000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26333000 57401 2771 51561 483569 383730 383730 1 VNLFILGK Unmodified 902.55894 0.55893865 2224 Q13017 ARHGAP5 Rho GTPase-activating protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 82.206 82.263 2 0.0099306 94788 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.297 29.279 31407000 0 0 0 1143000 1544900 3452300 2201800 1972600 2107600 3234500 2717500 4247500 2244900 0 6540200 57402 2224 51562 483570;483571;483572;483573;483574;483575;483576;483577;483578;483579;483580 383731;383732;383733;383734;383735;383736;383737;383738;383739 383734 9 VNLFPGLSPSALK Unmodified 1341.7656 0.76563696 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 87.091 86.529 2 6.1544E-08 100598 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 100.88 83.442 316530000 20408000 0 0 7099900 13917000 19380000 18012000 22838000 20608000 26664000 28753000 38586000 19419000 25029000 55819000 57403 4285 51563 483581;483582;483583;483584;483585;483586;483587;483588;483589;483590;483591;483592;483593 383740;383741;383742;383743;383744;383745;383746;383747;383748;383749;383750;383751;383752 383742 10 VNLFTDFDK Unmodified 1097.5393 0.53932542 1776 P55884 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.456 78.514 2 0.0039613 90076 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.37 70.812 534520000 0 0 0 22602000 19807000 30525000 26553000 27865000 23406000 44258000 52191000 63585000 42633000 53846000 127250000 57404 1776 51564 483594;483595;483596;483597;483598;483599;483600;483601;483602;483603;483604;483605 383753;383754;383755;383756;383757;383758;383759;383760;383761;383762;383763 383756 11 VNLGVGAYR Unmodified 947.51886 0.51886475 1049 P17174 GOT1 Aspartate aminotransferase, cytoplasmic yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 47.916 48.451 2 0.0052789 53390 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.149 33.702 106290000 0 0 0 0 0 0 0 0 0 0 14357000 17508000 0 16948000 57473000 57405 1049 51565 483606;483607;483608;483609 383764;383765;383766 383764 3 VNLLEMDDK Unmodified 1075.522 0.52196079 210 O14757 CHEK1 Serine/threonine-protein kinase Chk1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 62.463 62.667 2 0.0095883 70714 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.299 48.903 21985000 0 0 0 0 1940700 0 0 0 0 5583700 5420000 4585200 0 0 4455000 57406 210 51566 483610;483611;483612;483613;483614;483615;483616 383767;383768;383769;383770;383771 383767 5 VNLLSFTGSTQVGK Unmodified 1449.7827 0.78274359 1573 P49419 ALDH7A1 Alpha-aminoadipic semialdehyde dehydrogenase yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 80.366 80.517 2 0.02074 93056 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 45.879 31.206 20801000 0 0 0 0 0 0 0 3059100 0 3438300 5005300 6249900 0 3048600 0 57407 1573 51567 483617;483618;483619;483620;483621 383772 383772 1 VNLQMVYDSPLCR Unmodified 1593.7643 0.76433311 5090 Q9Y285 FARSA Phenylalanine--tRNA ligase alpha subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 2 1 1 1 1 80.328 80.482 2 1.1628E-08 92694 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 129.16 103.77 16421000 0 0 0 0 0 0 0 0 0 0 0 0 2527400 0 13894000 57408 5090 51568 483622;483623;483624;483625;483626;483627 383773;383774;383775;383776;383777;383778 383775 6 VNLQMVYDSPLCR Oxidation (M) 1609.7592 0.75924773 5090 Q9Y285 FARSA Phenylalanine--tRNA ligase alpha subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 74.044 74.198 2 0.00039987 85565 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 76.143 61.908 39807000 0 0 0 0 0 0 4239900 6811100 9016100 5402100 5831000 0 4177800 4329300 0 57409 5090 51568 483628;483629;483630;483631;483632;483633;483634;483635 383779;383780;383781;383782;383783;383784;383785;383786 383779 6489 8 VNLQNNPGAMEHFHMK Unmodified 1865.8665 0.86650677 1660 P51572 BCAP31 B-cell receptor-associated protein 31 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 54.535 54.718 4 0.0083322 61694 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 34.094 23.306 98089000 0 0 0 0 1378600 10216000 1656900 7901300 6493500 6141900 0 14310000 7613000 15695000 26683000 57410 1660 51569 483636;483637;483638;483639;483640;483641;483642;483643;483644;483645 383787;383788 383788 2 VNLSAAQTLR Unmodified 1071.6037 0.60365701 4165 Q9BUL8 PDCD10 Programmed cell death protein 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.552 48.712 2 0.00052078 55701 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 127.94 97.308 896230000 0 0 0 45337000 38640000 74597000 49877000 49527000 48846000 99020000 115410000 104390000 76955000 68165000 125470000 57411 4165 51570 483646;483647;483648;483649;483650;483651;483652;483653;483654;483655;483656;483657 383789;383790;383791;383792;383793;383794;383795;383796;383797;383798;383799;383800;383801;383802 383802 9 VNLVSGHVK Unmodified 951.55016 0.55016488 1864 P61962 DCAF7 DDB1- and CUL4-associated factor 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 25.015 25.277 2 0.0071628 25392 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.157 48.525 104530000 0 0 0 0 6081100 5449500 0 7247100 7802800 11404000 10112000 17475000 10164000 7443300 21349000 57412 1864 51571 483658;483659;483660;483661;483662;483663;483664;483665;483666;483667 383803;383804;383805;383806;383807;383808;383809 383804 7 VNMEDLR Unmodified 875.4171 0.41710179 2373;4663;3634 Q92599;Q14141;Q9NVA2 SEPT8;SEPT6;SEPT11 Septin-8;Septin-6;Septin-11 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 37.694 38.018 2 0.040205 42141 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 68.7 41.738 53207000 0 0 0 3876900 0 0 0 0 0 7213000 19036000 6910200 4454000 4446600 7270000 57413 3634;2373;4663 51572 483668;483669;483670;483671;483672;483673;483674 383810 383810 1 VNNADDFPNLFR Unmodified 1420.6735 0.67352749 2231 Q13085 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.797 80.857 2 2.8515E-08 93136 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 132.01 117.8 107370000 0 0 0 3489900 4909500 12008000 7552200 7103500 5627600 11644000 9355300 10500000 7335200 8796100 19049000 57414 2231 51573 483675;483676;483677;483678;483679;483680;483681;483682;483683;483684;483685;483686 383811;383812;383813;383814;383815;383816;383817;383818;383819;383820;383821;383822 383814 12 VNNEDPFR Unmodified 989.45666 0.45665842 1457 P42566 EPS15 Epidermal growth factor receptor substrate 15 yes yes 0 0 0 By MS/MS 10 0 1 1 32.201 32.513 2 0.049549 34469 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 47.082 31.643 4219700 0 0 0 0 0 0 0 0 0 0 0 0 0 4219700 0 57415 1457 51574 483687 383823 383823 1 VNNEDPFRSATSSSVSNVVITK Unmodified 2350.1765 0.1764674 1457 P42566 EPS15 Epidermal growth factor receptor substrate 15 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 74.436 70.582 3 0.0017717 85997 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 45.992 37.999 50446000 0 35920000 14526000 0 0 0 0 0 0 0 0 0 0 0 0 57416 1457 51575 483688;483689;483690 383824;383825 383825 2 VNNIHPAVHTK Unmodified 1228.6677 0.66765425 294 O15550;O14607 KDM6A;UTY Lysine-specific demethylase 6A;Histone demethylase UTY yes no 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 16.774 13.187 2;3 0.0084056 19183 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.847 47.319 35142000 31115000 0 4026500 0 0 0 0 0 0 0 0 0 0 0 0 57417 294 51576 483691;483692;483693 383826;383827;383828 383826 2 VNNIPSQSTR Unmodified 1114.5731 0.57308516 1396 P38398 BRCA1 Breast cancer type 1 susceptibility protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 17.834 18.085 2 0.01329 18410 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 51.346 19.026 23765000 0 0 0 0 2409800 2323600 0 0 2070700 2308300 2633000 3424300 2804600 2021200 3769300 57418 1396 51577 483694;483695;483696;483697;483698;483699;483700;483701;483702 383829;383830;383831;383832 383830 4 VNNNLSDELRIMQK Unmodified 1672.8567 0.85665359 2382 Q14161 GIT2 ARF GTPase-activating protein GIT2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 75.13 69.589 3 0.016173 85953 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 41.621 25.222 35166000 28814000 0 6351800 0 0 0 0 0 0 0 0 0 0 0 0 57419 2382 51578 483703;483704 383833;383834 383834 2 VNNSSLIGLGYTQTLKPGIK Unmodified 2102.1736 0.17355427 1129 P21796 VDAC1 Voltage-dependent anion-selective channel protein 1 yes yes 0 0 1 By matching By MS/MS By matching 10 0 3 1 1 1 77.915 78.119 3 0.00087604 90186 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 42.309 33.377 13156000 0 0 0 0 0 0 1471100 6532900 0 0 0 0 0 0 5152200 57420 1129 51579 483705;483706;483707 383835 383835 1 VNNSSLIGVGYTQTLRPGVK Unmodified 2102.1484 0.14840216 1485 P45880 VDAC2 Voltage-dependent anion-selective channel protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 72.636 72.552 3 3.0202E-11 84219 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 80.975 77.439 47384000 0 0 0 11894000 7650500 9546900 0 9357000 0 0 0 0 0 0 8935800 57421 1485 51580 483708;483709;483710;483711;483712;483713 383836;383837;383838;383839;383840;383841 383840 6 VNNSTGTSEDPSLQR Unmodified 1603.7438 0.7437919 4906 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.571 24.775 2 7.3292E-32 25195 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 151.1 136.12 79721000 0 0 0 6411800 5243400 6493600 5787400 4694500 4467700 7158900 6516000 8035500 6167600 6348200 12397000 57422 4906 51581 483714;483715;483716;483717;483718;483719;483720;483721;483722;483723;483724;483725 383842;383843;383844;383845;383846;383847;383848;383849;383850;383851;383852;383853 383845 12 VNNSTMLGASGDYADFQYLK Oxidation (M) 2208.9997 0.99974859 1229 P28070 PSMB4 Proteasome subunit beta type-4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 78.719 78.902 2 5.6125E-54 90760 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 124.09 116.89 93044000 0 0 0 0 0 0 0 0 0 0 21020000 17150000 0 9529300 45345000 57423 1229 51582 483726;483727;483728;483729 383854;383855;383856;383857;383858 383854 1823 5 VNNSTMLGASGDYADFQYLK Unmodified 2193.0048 0.0048339665 1229 P28070 PSMB4 Proteasome subunit beta type-4 yes yes 0 0 0 By MS/MS 10 0 1 1 83.022 83.212 3 0.026986 95997 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 23.601 18.984 20843000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20843000 57424 1229 51582 483730 383859 383859 1 VNNVNGNQVGHLK Unmodified 1391.727 0.72696004 2411 Q14527 HLTF Helicase-like transcription factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.15 2.41 2 1 24 2 1 2 2 2 2 2 2 2 2 2 2 2 2 22.295 22.051 2;3 3.3154E-12 21662 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 123.67 117.64 2199700000 0 88226000 51006000 116440000 110800000 159600000 170370000 169690000 103420000 190730000 175280000 325520000 173620000 101410000 263620000 57425 2411 51583 483731;483732;483733;483734;483735;483736;483737;483738;483739;483740;483741;483742;483743;483744;483745;483746;483747;483748;483749;483750;483751;483752;483753;483754;483755;483756;483757 383860;383861;383862;383863;383864;383865;383866;383867;383868;383869;383870;383871;383872;383873;383874;383875;383876;383877;383878;383879;383880;383881 383875 20 VNNVVWDLDRPLEEDCTLELLK Unmodified 2669.3371 0.33706714 1209 P26639 TARS Threonine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 96.715 92.047 3 1.1774E-21 115095 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 106.69 99.816 773620000 599870000 170080000 3682100 0 0 0 0 0 0 0 0 0 0 0 0 57426 1209 51584 483758;483759;483760;483761 383882;383883;383884 383884 3 VNNYIEDCIAQK Unmodified 1465.6871 0.68712864 3742 Q96AX1 VPS33A Vacuolar protein sorting-associated protein 33A yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 63.13 57.794 2 0.0019659 74182 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.35 81.123 83564000 0 83564000 0 0 0 0 0 0 0 0 0 0 0 0 0 57427 3742 51585 483762;483763 383885 383885 1 VNPAAALEELEK Unmodified 1282.6769 0.67688153 4189 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82.118 81.652 2 0.0040656 94668 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 58.676 47.525 153650000 0 80779000 1377600 2399500 5766800 4661700 3381400 4635600 3883200 7375600 6132700 7027700 6677300 6565800 12990000 57428 4189 51586 483764;483765;483766;483767;483768;483769;483770;483771;483772;483773;483774;483775;483776;483777 383886;383887;383888;383889;383890;383891;383892;383893;383894;383895;383896;383897;383898;383899 383895 14 VNPALAELNLR Unmodified 1208.6877 0.68772099 979 P13489 RNH1 Ribonuclease inhibitor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.256 75.315 2 0.00030992 86785 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 106.88 85.432 699030000 0 0 0 26372000 28101000 72647000 50701000 38482000 24150000 71097000 71806000 77879000 46560000 56695000 134540000 57429 979 51587 483778;483779;483780;483781;483782;483783;483784;483785;483786;483787;483788;483789 383900;383901;383902;383903;383904;383905;383906;383907;383908;383909;383910;383911;383912 383901 13 VNPDLQVEVKPSIR Unmodified 1592.8886 0.88860564 3913 Q96KR1 ZFR Zinc finger RNA-binding protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 61.548 61.641 3 0.0023191 70326 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 48.177 43.463 82312000 0 0 0 2079400 3687400 3865300 7051800 4649200 0 6628300 9053500 13550000 8670900 7619300 15456000 57430 3913 51588 483790;483791;483792;483793;483794;483795;483796;483797;483798;483799;483800 383913;383914;383915;383916;383917;383918 383913 6 VNPDMNFEVFIHK Unmodified 1588.7708 0.77079869 4498 Q9HB90 RRAGC Ras-related GTP-binding protein C yes yes 0 0 0 By MS/MS 2 0 1 1 88.395 80.265 3 0.012959 104416 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 34.179 21.042 7769900 7769900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57431 4498 51589 483801 383919 383919 1 VNPDTGYINYDQLEENAR Unmodified 2109.9603 0.96032661 1335 P34896 SHMT1 Serine hydroxymethyltransferase, cytosolic yes yes 0 0 0 By matching By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 73.134 73.372 2 4.9042E-26 83645 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 127.76 114.99 40829000 0 0 0 0 0 0 0 3209500 0 0 10382000 0 0 6471900 20765000 57432 1335 51590 483802;483803;483804;483805 383920;383921 383921 2 VNPDTGYINYDQLEENARLFHPK Unmodified 2732.3194 0.31944324 1335 P34896 SHMT1 Serine hydroxymethyltransferase, cytosolic yes yes 0 0 1 By MS/MS By MS/MS 2.67 0.471 1 2 2 1 85.849 80.849 4 0.01398 103149 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 27.739 22.289 24033000 14589000 9443800 0 0 0 0 0 0 0 0 0 0 0 0 0 57433 1335 51591 483806;483807;483808 383922;383923 383923 2 VNPEREDSETR Unmodified 1330.6113 0.61132116 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 0 1 By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS 10 0 13 1 1 1 1 1 1 1 2 1 1 1 1 7.2026 7.3443 3 0.00021006 5414 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 83.081 76.062 245610000 0 0 0 12492000 11971000 11585000 11644000 14110000 10130000 32549000 36128000 24934000 22055000 29686000 28324000 57434 5189 51592 483809;483810;483811;483812;483813;483814;483815;483816;483817;483818;483819;483820;483821 383924;383925;383926;383927;383928;383929 383926 2 VNPFRPGDSEPPPAPGAQR Unmodified 1987.9864 0.98642221 2595 Q15942 ZYX Zyxin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 2 1 1 1 1 1 1 51.181 50.581 3 5.6604E-42 56675 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 122.44 103.37 550180000 27814000 0 0 22315000 20543000 0 36985000 11867000 0 39978000 107120000 72661000 40932000 49171000 120790000 57435 2595 51593 483822;483823;483824;483825;483826;483827;483828;483829;483830;483831;483832;483833;483834 383930;383931;383932;383933;383934;383935;383936;383937;383938;383939;383940;383941;383942;383943;383944;383945;383946;383947;383948;383949;383950;383951;383952;383953 383942 24 VNPGGGITATK Unmodified 1013.5506 0.55055881 3294 Q8IZE3 SCYL3 Protein-associating with the carboxyl-terminal domain of ezrin yes yes 0 0 0 By MS/MS 2 0 1 1 25.899 21.696 2 0.025963 28624 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 55.314 11.197 14077000 0 14077000 0 0 0 0 0 0 0 0 0 0 0 0 0 57436 3294 51594 483835 383954 383954 1 VNPHSLPDPEVNEQSSSK Unmodified 1962.9283 0.9282982 4026 Q99575 POP1 Ribonucleases P/MRP protein subunit POP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.145 42.322 3 2.8585E-26 47210 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 105.89 93.368 212390000 0 0 0 15505000 15314000 13676000 16770000 12284000 13377000 20302000 22148000 25713000 19628000 14959000 22716000 57437 4026 51595 483836;483837;483838;483839;483840;483841;483842;483843;483844;483845;483846;483847 383955;383956;383957;383958;383959;383960;383961;383962;383963;383964;383965;383966;383967;383968;383969 383965 14 VNPNTALTLLEK Unmodified 1311.7398 0.73981614 3471 Q8TAG9 EXOC6 Exocyst complex component 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.665 79.771 2 0.00042856 91861 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.102 67.865 62357000 0 0 0 0 3908400 4696700 3589800 4560500 2612200 7316300 5936900 12406000 0 5823800 11507000 57438 3471 51596 483848;483849;483850;483851;483852;483853;483854;483855;483856;483857;483858 383970;383971;383972;383973;383974;383975;383976;383977;383978 383973 9 VNPQDGTNTLTR Unmodified 1314.6528 0.65279205 4469 Q9H9B1 EHMT1 Histone-lysine N-methyltransferase EHMT1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.488 28.638 2 0.00030892 30785 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 95.573 72.833 226600000 0 0 0 14216000 16250000 17791000 14520000 13406000 14745000 24566000 33768000 29193000 24926000 23217000 0 57439 4469 51597 483859;483860;483861;483862;483863;483864;483865;483866;483867;483868;483869;483870 383979;383980;383981;383982;383983;383984;383985;383986;383987;383988 383981 10 VNPQGPGPEEK Unmodified 1150.5619 0.56185177 1339 P35052 GPC1 Glypican-1;Secreted glypican-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 1 1 2 1 2 1 2 1 1 1 14.357 14.537 2 1.4476E-05 14195 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 135.71 100.89 154880000 0 0 0 8217400 12141000 12462000 8055000 9417000 5704400 17120000 16706000 24062000 12601000 14356000 14038000 57440 1339 51598 483871;483872;483873;483874;483875;483876;483877;483878;483879;483880;483881;483882;483883;483884;483885 383989;383990;383991;383992;383993;383994;383995;383996;383997;383998;383999;384000 383999 12 VNPQISDEK Unmodified 1028.5138 0.51383895 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 18.738 18.612 2 0.0030483 19178 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 91.318 43.469 102520000 0 28441000 0 4849500 4770000 9967500 3310900 0 7184200 7388300 7152200 8727600 5834700 6003400 8888800 57441 1201 51599 483886;483887;483888;483889;483890;483891;483892;483893;483894;483895;483896;483897 384001;384002;384003;384004;384005;384006;384007;384008;384009 384001 9 VNPQISDEKDEDEK Unmodified 1644.7479 0.74787422 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.32 3.22 5 1 22 2 3 1 1 2 2 2 2 1 2 2 2 2 2 2 19.559 18.861 2;3 8.3424E-08 19502 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 84.468 77.06 576760000 43542000 277350000 1742200 21984000 20671000 15050000 20407000 16917000 10054000 23011000 29647000 24979000 17509000 13502000 40389000 57442 1201 51600 483898;483899;483900;483901;483902;483903;483904;483905;483906;483907;483908;483909;483910;483911;483912;483913;483914;483915;483916;483917;483918;483919;483920;483921;483922;483923;483924;483925 384010;384011;384012;384013;384014;384015;384016;384017;384018;384019;384020;384021;384022;384023;384024;384025;384026 384011 15 VNPQISDEKDEDEKEEK Unmodified 2030.928 0.92802343 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 0 2 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 17.611 17.829 3 0.040464 17350 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 40.515 30.727 46083000 0 0 0 0 3220800 1383400 4280800 4609100 2398800 5231600 4042500 7061100 3365000 5603400 4886000 57443 1201 51601 483926;483927;483928;483929;483930;483931;483932;483933;483934;483935;483936 384027 384027 1 VNPREIAENITK Unmodified 1382.7518 0.75177781 1733 P54136 RARS Arginine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 65.968 59.941 3 0.010045 80113 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.806 53.704 588290000 570600000 0 17689000 0 0 0 0 0 0 0 0 0 0 0 0 57444 1733 51602 483937;483938 384028 384028 0 VNPSVNPSISPAHGVAR Unmodified 1700.8958 0.89581629 2578 Q15788 NCOA1 Nuclear receptor coactivator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 45.297 45.599 3 0.0022439 51175 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 43.454 32.796 30245000 0 0 0 0 0 4179600 5525500 5674000 0 0 5824300 0 2956700 0 6085400 57445 2578 51603 483939;483940;483941;483942;483943;483944 384029;384030;384031 384031 3 VNPTVFFDIAVDGEPLGR Unmodified 1944.9945 0.99452728 1931 P62937 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes yes 0 0 0 By MS/MS 2 0 1 1 99.248 91.118 2 0.0038855 117499 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.679 44.279 7368700 7368700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57446 1931 51604 483945 384032 384032 1 VNPTVFFDIAVDGEPLGR Acetyl (Protein N-term) 1987.0051 0.005091963 1931 P62937 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes yes 1 0 0 By MS/MS 2 0 1 1 103.67 95.539 2 1.5129E-36 122755 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 128.96 116.19 10513000 10513000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57447 1931 51604 483946 384033;384034 384034 2 VNPTVFFDIAVDGEPLGRVSFELFADK Unmodified 2981.5175 0.51747435 1931 P62937 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 102.43 96.983 3 9.2209E-34 121637 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.679 90.584 42718000 16992000 25726000 0 0 0 0 0 0 0 0 0 0 0 0 0 57448 1931 51605 483947;483948;483949 384035;384036;384037;384038 384036 4 VNPVTSLSENYTCSDSEESSEK Unmodified 2461.0439 0.043857827 2406 Q14432 PDE3A cGMP-inhibited 3',5'-cyclic phosphodiesterase A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 13 1 2 2 1 2 1 1 1 2 62.9 62.945 2;3 3.5368E-05 72288 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 46.578 43.736 83092000 0 0 0 8121900 10024000 11937000 8275600 13110000 4491100 0 3709000 0 0 6323700 17100000 57449 2406 51606 483950;483951;483952;483953;483954;483955;483956;483957;483958;483959;483960;483961;483962 384039;384040;384041;384042;384043;384044;384045 384045 6 VNQCVIGTAQANRK Unmodified 1557.8046 0.80455844 4199 Q9BW19 KIFC1 Kinesin-like protein KIFC1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 25.268 25.514 3 0.0091858 26903 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 26.729 14.753 78862000 0 0 0 0 8500400 6404600 7160200 0 4795700 4967400 7224400 9938700 13405000 5285500 11180000 57450 4199 51607 483963;483964;483965;483966;483967;483968;483969;483970;483971;483972 384046;384047;384048;384049;384050;384051;384052;384053 384050 8 VNQGLIR Unmodified 798.47119 0.47118627 2509 Q15257 PPP2R4 Serine/threonine-protein phosphatase 2A activator yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 25.214 25.461 2 0.049029 26318 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.547 32.434 69668000 0 0 0 0 3941400 8690900 5919600 0 0 4960300 8295400 7029600 0 7065900 23765000 57451 2509 51608 483973;483974;483975;483976;483977;483978;483979;483980 384054 384054 1 VNQIGSVTESLQACK Unmodified 1632.8141 0.81412007 827 P06733 ENO1 Alpha-enolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.09 3.74 1 8 5 8 3 10 1 2 1 2 1 2 66.335 63.327 2;3 3.4806E-72 77452 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 234.72 0 11984000000 383820000 10710000000 72483000 65012000 0 0 0 0 0 0 110910000 216450000 0 93187000 331730000 57452 827 51609 483981;483982;483983;483984;483985;483986;483987;483988;483989;483990;483991;483992;483993;483994;483995;483996;483997;483998;483999;484000;484001;484002 384055;384056;384057;384058;384059;384060;384061;384062;384063;384064;384065;384066;384067;384068;384069;384070;384071;384072;384073;384074;384075;384076;384077;384078;384079;384080;384081;384082;384083 384058 28 VNQIQDHLLK Unmodified 1206.6721 0.67207093 3636 Q92609 TBC1D5 TBC1 domain family member 5 yes yes 0 0 0 By MS/MS By MS/MS 2 0 4 2 2 50.129 44.181 2;3 0.02887 61107 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.056 41.111 135260000 107370000 0 27893000 0 0 0 0 0 0 0 0 0 0 0 0 57453 3636 51610 484003;484004;484005;484006 384084;384085 384084 2 VNQPASFAIR Unmodified 1101.5931 0.59309232 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.183 51.332 2 0.0013256 57972 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 107.57 76.345 308430000 0 0 0 16807000 11091000 20712000 15742000 13560000 0 21880000 38097000 32562000 16130000 33014000 88831000 57454 487 51611 484007;484008;484009;484010;484011;484012;484013;484014;484015;484016;484017;484018 384086;384087;384088;384089;384090;384091;384092;384093;384094;384095;384096;384097 384086 12 VNQPASFAVSLNGAK Unmodified 1501.7889 0.7888916 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 69.034 67.485 2;3 5.9181E-15 77223 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 103.91 82.537 2114600000 53487000 1593400000 3263000 15950000 20455000 38037000 31405000 20355000 19937000 36139000 64209000 51430000 26920000 43279000 96274000 57455 1124 51612 484019;484020;484021;484022;484023;484024;484025;484026;484027;484028;484029;484030;484031;484032;484033;484034;484035 384098;384099;384100;384101;384102;384103;384104;384105;384106;384107;384108;384109;384110;384111;384112;384113;384114;384115 384110 18 VNQQPNTSDK Unmodified 1129.5364 0.53636531 1741 P54578 USP14 Ubiquitin carboxyl-terminal hydrolase 14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.21 3.43 1 2 11 2 1 1 1 1 1 1 1 1 1 1 1 1 13.821 13.786 2 4.3072E-11 5227 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 162.49 142.72 117220000 65294000 37250000 0 885710 482850 4421100 1098300 666940 1095400 0 0 1070300 1489200 793410 2677600 57456 1741 51613 484036;484037;484038;484039;484040;484041;484042;484043;484044;484045;484046;484047;484048;484049 384116;384117;384118;384119;384120 384117 4 VNQQPNTSDKK Unmodified 1257.6313 0.63132832 1741 P54578 USP14 Ubiquitin carboxyl-terminal hydrolase 14 yes yes 0 0 1 By matching By MS/MS 2.33 0.471 2 1 1 2 5.627 2.3006 3 0.00031118 4306 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.014 68.349 800480000 29235000 771250000 0 0 0 0 0 0 0 0 0 0 0 0 0 57457 1741 51614 484050;484051;484052 384121;384122;384123 384121 3 VNQSALEAVTPSPSFQQR Unmodified 1957.9858 0.9857535 4965 Q9UKG1 APPL1 DCC-interacting protein 13-alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 2 1 1 1 2 2 2 1 2 2 70.038 70.2 2;3 6.4227E-07 80134 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 97.69 76.46 99329000 0 0 0 2003000 0 17588000 3422600 2786000 3350800 12142000 12688000 15053000 5323300 9787700 15185000 57458 4965 51615 484053;484054;484055;484056;484057;484058;484059;484060;484061;484062;484063;484064;484065;484066;484067;484068;484069 384124;384125;384126;384127;384128;384129;384130;384131;384132;384133 384126 10 VNQTVAALK Unmodified 942.54983 0.54983053 2794 Q5TBB1 RNASEH2B Ribonuclease H2 subunit B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 30.809 29.451 2 0.0053721 38160 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.86 50.657 301270000 9362100 249440000 1920800 1826300 1749600 3229600 2194300 2377100 0 4672600 4145500 0 0 5050900 15298000 57459 2794 51616 484070;484071;484072;484073;484074;484075;484076;484077;484078;484079;484080;484081;484082 384134;384135;384136;384137 384135 4 VNRLDMYGEK Unmodified 1223.5969 0.59685707 5117;1724 P53677;Q9Y2T2 AP3M2;AP3M1 AP-3 complex subunit mu-2;AP-3 complex subunit mu-1 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.14 3.83 5 9 2 1 2 1 1 1 1 1 1 1 1 1 34.136 32.414 2;3 0.0041914 45955 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.744 49.731 454850000 224800000 45321000 17575000 9371300 12187000 21874000 16539000 20010000 16118000 19351000 28115000 0 0 0 23589000 57460 1724;5117 51617 484083;484084;484085;484086;484087;484088;484089;484090;484091;484092;484093;484094;484095;484096 384138;384139;384140;384141;384142;384143;384144 384141 5 VNRLDMYGEK Oxidation (M) 1239.5918 0.59177169 5117;1724 P53677;Q9Y2T2 AP3M2;AP3M1 AP-3 complex subunit mu-2;AP-3 complex subunit mu-1 no no 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 26.365 22.19 3 0.0076478 31495 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.267 38.938 93029000 74106000 0 18923000 0 0 0 0 0 0 0 0 0 0 0 0 57461 1724;5117 51617 484097;484098 384145 384145 2803 1 VNRLLDSLEPPGEPGPSTNIPENDTVDGREEK Unmodified 3473.691 0.69103463 3654 Q92734 TFG Protein TFG yes yes 0 0 2 By MS/MS By MS/MS 2 0 3 2 1 80.818 74.536 3;4 1.5165E-12 96252 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.724 58.512 152920000 141320000 0 11598000 0 0 0 0 0 0 0 0 0 0 0 0 57462 3654 51618 484099;484100;484101 384146;384147;384148;384149 384148 4 VNSETQQQLNK Unmodified 1287.6419 0.64189301 2360 Q14004 CDK13 Cyclin-dependent kinase 13 yes yes 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 12.33 12.495 2 0.028876 11717 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 46.891 33.122 9426900 0 0 0 0 516790 0 912320 808900 0 857580 0 1933100 1404600 781690 2211900 57463 2360 51619 484102;484103;484104;484105;484106;484107;484108;484109 384150 384150 1 VNSFQNMK Unmodified 966.4593 0.45930096 1592 P49750 YLPM1 YLP motif-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 29.277 24.929 2 0.019457 32777 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.872 60.764 16613000 0 16613000 0 0 0 0 0 0 0 0 0 0 0 0 0 57464 1592 51620 484110 384151 384151 1 VNSIIIDNCK Unmodified 1174.6016 0.6016081 1408 P40123 CAP2 Adenylyl cyclase-associated protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 49.553 43.846 2 0.014514 57010 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.73 93.687 80024000 0 80024000 0 0 0 0 0 0 0 0 0 0 0 0 0 57465 1408 51621 484111 384152 384152 0 VNSLGETAER Unmodified 1074.5306 0.53055165 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 19.514 19.719 2 0.00042243 20121 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 137.14 94.739 251950000 0 0 0 12303000 10349000 22747000 16826000 12271000 0 24562000 30956000 34142000 17375000 23736000 46683000 57466 2344 51622 484112;484113;484114;484115;484116;484117;484118;484119;484120;484121;484122 384153;384154;384155;384156;384157;384158;384159;384160;384161;384162;384163 384154 10 VNSLGETAERLIQSHPESAEDLQEK Unmodified 2779.3624 0.36243027 2344 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 83.088 77.21 3;4 1.3705E-46 98892 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 118.22 77.539 204540000 131200000 69095000 4246000 0 0 0 0 0 0 0 0 0 0 0 0 57467 2344 51623 484123;484124;484125;484126 384164;384165;384166;384167 384166 4 VNSLPEILK Unmodified 1011.5964 0.59644637 4770 Q9NZJ4 SACS Sacsin yes yes 0 0 0 By MS/MS 2 0 1 1 76.939 72.102 2 0.038701 90083 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 61.582 22.79 14186000 0 14186000 0 0 0 0 0 0 0 0 0 0 0 0 0 57468 4770 51624 484127 384168 384168 1 VNSMVAYK Unmodified 910.45824 0.45823833 2261 Q13257 MAD2L1 Mitotic spindle assembly checkpoint protein MAD2A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 28.827 29.231 2 0.0090255 31821 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 84.227 41.227 141370000 0 0 0 0 0 17457000 0 0 0 24842000 27589000 23211000 0 0 48273000 57469 2261 51625 484128;484129;484130;484131;484132 384169;384170;384171;384172;384173 384169 2 VNSMVAYK Oxidation (M) 926.45315 0.45315295 2261 Q13257 MAD2L1 Mitotic spindle assembly checkpoint protein MAD2A yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 18.325 15.341 2 0.016467 19977 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.754 54.016 104960000 0 100830000 4128500 0 0 0 0 0 0 0 0 0 0 0 0 57470 2261 51625 484133;484134 384174 384174 3680 1 VNSNSLDLPSSSDTTHASK Unmodified 1958.9181 0.91812745 3432 Q8NEY1 NAV1 Neuron navigator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 41.401 41.579 3 7.7206E-06 45382 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 67.227 60.907 204420000 0 0 0 11370000 12215000 14370000 13856000 13228000 13474000 23085000 21949000 20928000 21544000 14059000 24345000 57471 3432 51626 484135;484136;484137;484138;484139;484140;484141;484142;484143;484144;484145;484146;484147 384175;384176;384177;384178;384179;384180;384181;384182;384183;384184;384185;384186;384187;384188;384189 384185 15 VNSPFLDSDSSLEK Unmodified 1536.7308 0.7307676 2859 Q68DQ2 CRYBG3 Very large A-kinase anchor protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 68.82 66.116 2 0.0081187 75835 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 57.836 43.678 44375000 0 38389000 0 0 0 0 0 0 0 0 5986700 0 0 0 0 57472 2859 51627 484148;484149;484150 384190;384191;384192 384190 3 VNSSLSDELRR Unmodified 1274.6579 0.65787742 5126 Q9Y2X7 GIT1 ARF GTPase-activating protein GIT1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.72 36.901 3 0.00013699 40788 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 79.659 68.076 181230000 0 0 0 7720300 10360000 15049000 13224000 13264000 9597800 16714000 15765000 17929000 18063000 12548000 31001000 57473 5126 51628 484151;484152;484153;484154;484155;484156;484157;484158;484159;484160;484161;484162 384193;384194;384195;384196;384197;384198;384199;384200;384201;384202;384203;384204 384201 12 VNSTTKPEDGGLK Unmodified 1344.6885 0.68850885 5192 Q9Y4B6 VPRBP Protein VPRBP yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 13.852 14.015 3 0.011369 12936 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 37.594 12.74 71095000 0 0 0 4869100 5078500 4851700 3851100 0 2998500 7989800 7748500 8535500 9619300 7658000 7895000 57474 5192 51629 484163;484164;484165;484166;484167;484168;484169;484170;484171;484172;484173 384205;384206 384205 2 VNTDLGNDLYFVK Unmodified 1496.7511 0.75110911 3560 Q8WVC0 LEO1 RNA polymerase-associated protein LEO1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 80.718 79.597 2 4.5548E-34 98670 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 177.57 159.71 1137100000 13869000 513820000 9500500 11796000 25452000 30126000 25712000 32554000 29270000 57213000 69134000 84679000 56196000 70129000 107620000 57475 3560 51630 484174;484175;484176;484177;484178;484179;484180;484181;484182;484183;484184;484185;484186;484187;484188;484189 384207;384208;384209;384210;384211;384212;384213;384214;384215;384216;384217;384218;384219;384220;384221;384222;384223 384210 17 VNTELMK Oxidation (M) 849.4266 0.42660385 212 O14773 TPP1 Tripeptidyl-peptidase 1 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 14.501 14.638 2 0.037908 13945 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 56.122 24.057 45571000 0 0 0 7044100 2426200 3469800 2620600 3873900 2623900 4161800 5204200 4388700 5953500 3804300 0 57476 212 51631 484190;484191;484192;484193;484194;484195;484196;484197;484198;484199;484200 384224 384224 1 VNTENLLQVENTGK Unmodified 1557.7999 0.79985021 1259 P30039 PBLD Phenazine biosynthesis-like domain-containing protein yes yes 0 0 0 By MS/MS 2 0 1 1 67.673 61.757 2 2.3292E-06 78933 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.57 103.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57477 1259 51632 484201 384225 384225 1 VNTFSALLLEPYKPPSAQ Unmodified 1974.0462 0.046228496 353 O43681 ASNA1 ATPase ASNA1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 91.576 90.638 2 1.678E-18 113685 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 142.85 127.98 321370000 96947000 84695000 0 1799400 5050900 10774000 5187600 10535000 6563700 24694000 14822000 15981000 0 9262500 35058000 57478 353 51633 484202;484203;484204;484205;484206;484207;484208;484209;484210;484211;484212;484213;484214 384226;384227;384228 384227 3 VNTGFLMSSYK Oxidation (M) 1261.6013 0.60127375 3116 Q7Z6K5 ARPIN Arpin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6 4 3 3 1 1 1 1 1 1 59.986 57.178 2 0.0042753 76404 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.662 57.876 57170000 23294000 18731000 1816000 0 0 0 3852100 0 0 0 5128400 0 0 0 4349100 57479 3116 51634 484215;484216;484217;484218;484219;484220 384229;384230;384231;384232;384233 384232 4721 5 VNTGFLMSSYK Unmodified 1245.6064 0.60635913 3116 Q7Z6K5 ARPIN Arpin yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 76.114 69.579 2 0.00042396 90358 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.24 87.457 98808000 48467000 50342000 0 0 0 0 0 0 0 0 0 0 0 0 0 57480 3116 51634 484221;484222 384234;384235 384235 2 VNTLIRPDGEK Unmodified 1240.6776 0.67755023 1908 P62750 RPL23A 60S ribosomal protein L23a yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.18 3.29 6 2 26 2 4 2 2 2 2 2 2 2 2 2 3 2 3 2 32.036 31.061 2;3 1.5337E-35 32840 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 181.87 138.57 3629200000 262260000 384500000 216380000 142850000 188710000 237190000 228160000 137370000 220100000 270110000 205000000 432320000 194250000 195760000 314210000 57481 1908 51635 484223;484224;484225;484226;484227;484228;484229;484230;484231;484232;484233;484234;484235;484236;484237;484238;484239;484240;484241;484242;484243;484244;484245;484246;484247;484248;484249;484250;484251;484252;484253;484254;484255;484256 384236;384237;384238;384239;384240;384241;384242;384243;384244;384245;384246;384247;384248;384249;384250;384251;384252;384253;384254;384255;384256;384257;384258;384259;384260;384261 384259 17 VNTLVAAANSLDNLCR Unmodified 1729.8781 0.87811731 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 2 2 2 2 1 2 1 1 1 1 2 82.89 83.007 2;3 9.8456E-15 96312 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 99.5 84.938 86603000 0 0 0 0 2221600 7025100 4418500 6856900 2891400 10680000 9071500 8655600 0 9638500 25143000 57482 5189 51636 484257;484258;484259;484260;484261;484262;484263;484264;484265;484266;484267;484268;484269;484270;484271;484272;484273 384262;384263;384264;384265;384266;384267;384268;384269;384270 384269 9 VNTPTTTVYR Unmodified 1150.5982 0.59823728 1209 P26639 TARS Threonine--tRNA ligase, cytoplasmic yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 34.701 34.828 2 0.001444 37064 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.087 75.827 387840000 0 0 0 7838400 7142800 13870000 12646000 0 0 0 89597000 0 13341000 49060000 194340000 57483 1209 51637 484274;484275;484276;484277;484278;484279;484280;484281 384271;384272;384273;384274 384273 2 VNTQSSSNSTLPER Unmodified 1518.7274 0.72741355 3267 Q8IXW5 RPAP2 Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.638 22.844 2 2.0272E-16 23423 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 121.08 96.221 59279000 0 0 0 3222200 3522100 3699000 3334200 4031500 2442600 6556300 5899600 8071400 5742300 5941100 6816900 57484 3267 51638 484282;484283;484284;484285;484286;484287;484288;484289;484290;484291;484292;484293 384275;384276;384277;384278;384279;384280;384281;384282;384283;384284;384285;384286 384280 12 VNTQSSSNSTLPERLK Unmodified 1759.9064 0.90644055 3267 Q8IXW5 RPAP2 Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 41.047 35.905 3 0.013353 45355 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 49.343 39.286 64118000 57303000 0 6815400 0 0 0 0 0 0 0 0 0 0 0 0 57485 3267 51639 484294;484295 384287;384288 384288 1 VNTRAGPSQHSSPAVSDSLPSNSLK Unmodified 2535.2677 0.26774202 2246 Q13163 MAP2K5 Dual specificity mitogen-activated protein kinase kinase 5 yes yes 0 0 1 By MS/MS 2 0 2 2 53.686 45.623 3;4 1.3993E-05 62709 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.801 57.161 42387000 42387000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57486 2246 51640 484296;484297 384289;384290 384290 2 VNVAGLVLAGSADFK Unmodified 1459.8035 0.80347903 1902 P62495 ETF1 Eukaryotic peptide chain release factor subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.24 3.75 5 1 11 1 3 2 1 1 1 1 1 1 1 1 1 1 1 90.525 89.062 2;3 1.1897E-22 108426 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 153.75 142.92 392740000 210880000 125700000 23046000 0 919420 1549500 1072500 1975100 1155100 7870500 3484500 2717100 726140 2301600 9347900 57487 1902 51641 484298;484299;484300;484301;484302;484303;484304;484305;484306;484307;484308;484309;484310;484311;484312;484313;484314 384291;384292;384293;384294;384295;384296;384297;384298;384299;384300;384301;384302;384303;384304;384305;384306;384307 384304 15 VNVDEVGGEALGR Unmodified 1313.6575 0.65754307 1967 P68871 HBB Hemoglobin subunit beta;LVV-hemorphin-7;Spinorphin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 54.998 55.113 2 4.7087E-05 63351 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 88.596 61.293 71268000 0 0 0 27867000 0 3724100 0 23623000 0 4383100 0 5193900 3490900 2986200 0 57488 1967 51642 484315;484316;484317;484318;484319;484320;484321 384308;384309;384310;384311 384310 4 VNVDIINFGEEEVNTEK Unmodified 1947.9426 0.94255129 1752 P55036;A2A3N6 PSMD4;PIPSL 26S proteasome non-ATPase regulatory subunit 4;Putative PIP5K1A and PSMD4-like protein yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 4 8 2 2 1 1 1 1 1 1 1 1 85.315 83.677 2;3 3.2198E-52 97204 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 160.69 144.34 251710000 0 176590000 19155000 2996500 6021600 0 0 0 0 21719000 11551000 13677000 0 0 0 57489 1752 51643 484322;484323;484324;484325;484326;484327;484328;484329;484330;484331;484332;484333 384312;384313;384314;384315;384316;384317;384318;384319;384320;384321;384322 384317 9 VNVEAPDVNLEGLGGK Unmodified 1609.8312 0.83115034 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 77.661 77.133 2 8.8639E-50 89598 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 198.49 178.72 1391200000 0 607100000 0 27382000 45755000 42959000 60018000 65090000 66198000 60416000 64838000 92182000 69530000 73134000 116650000 57490 2172 51644 484334;484335;484336;484337;484338;484339;484340;484341;484342;484343;484344;484345;484346;484347 384323;384324;384325;384326;384327;384328;384329;384330;384331;384332;384333;384334;384335;384336;384337;384338 384335 16 VNVEHMTEK Oxidation (M) 1101.5125 0.51245874 1063 P17858 PFKL ATP-dependent 6-phosphofructokinase, liver type yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.36 2.17 2 23 1 1 2 2 2 2 2 2 2 1 2 2 2 2 7.1519 6.9769 2 0.0020189 4726 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 91.265 72.162 453330000 6694700 153430000 0 13862000 15291000 22811000 18111000 19295000 22018000 38841000 23216000 26654000 35960000 24906000 32241000 57491 1063 51645 484348;484349;484350;484351;484352;484353;484354;484355;484356;484357;484358;484359;484360;484361;484362;484363;484364;484365;484366;484367;484368;484369;484370;484371;484372 384339;384340;384341;384342;384343;384344;384345;384346;384347;384348;384349;384350;384351;384352;384353 384346 1498 15 VNVEHMTEK Unmodified 1085.5175 0.51754412 1063 P17858 PFKL ATP-dependent 6-phosphofructokinase, liver type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19.936 19.294 2 2.5217E-05 18359 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 152.06 96.557 851620000 33829000 374800000 87369000 17025000 16843000 28283000 15911000 23479000 13539000 40990000 41748000 38798000 33517000 28415000 57078000 57492 1063 51645 484373;484374;484375;484376;484377;484378;484379;484380;484381;484382;484383;484384;484385;484386;484387 384354;384355;384356;384357;384358;384359;384360;384361;384362;384363;384364;384365;384366;384367;384368;384369 384358 13 VNVGAGSHPNK Unmodified 1078.552 0.55195579 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.6712 7.7984 2 3.8392E-08 5633 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 150.35 133.57 204460000 0 0 0 5576000 7203200 9996300 11032000 8204100 6704700 16315000 61929000 15301000 17040000 18627000 26530000 57493 1124 51646 484388;484389;484390;484391;484392;484393;484394;484395;484396;484397;484398;484399 384370;384371;384372;384373;384374;384375;384376;384377;384378 384375 9 VNVPEESR Unmodified 928.46141 0.46140945 4874 Q9UEY8 ADD3 Gamma-adducin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.166 21.37 2 0.026823 21757 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 57.722 27.404 80593000 0 0 0 3626000 5526600 7385000 5457000 5911600 5421900 6446300 8001100 9647900 6966900 6648500 9554600 57494 4874 51647 484400;484401;484402;484403;484404;484405;484406;484407;484408;484409;484410;484411 384379;384380;384381;384382 384380 4 VNVPEESRNGETSPR Unmodified 1669.802 0.80197548 4874 Q9UEY8 ADD3 Gamma-adducin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 24.699 24.927 3 0.0070869 25877 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 37.092 31.663 51174000 0 0 0 0 3221000 4509600 5515400 4741000 4560000 4017600 5214600 5565200 0 2908200 10921000 57495 4874 51648 484412;484413;484414;484415;484416;484417;484418;484419;484420;484421 384383;384384 384384 2 VNVPEESRNGETSPRTK Unmodified 1898.9446 0.94461697 4874 Q9UEY8 ADD3 Gamma-adducin yes yes 0 0 2 By MS/MS 2 0 1 1 23.595 20.679 4 0.043557 26330 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 25.198 14.822 14432000 0 0 14432000 0 0 0 0 0 0 0 0 0 0 0 0 57496 4874 51649 484422 384385 384385 1 VNVPGSQAQLK Unmodified 1139.6299 0.62987176 2082 Q02818 NUCB1 Nucleobindin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39.034 38.558 2 0.00033396 41689 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.25 79.62 430780000 0 232560000 1989500 12039000 9696500 10064000 12489000 11210000 9673300 11856000 24996000 32252000 15420000 17464000 29074000 57497 2082 51650 484423;484424;484425;484426;484427;484428;484429;484430;484431;484432;484433;484434;484435;484436 384386;384387;384388;384389;384390;384391;384392;384393;384394;384395;384396;384397;384398 384390 13 VNVPVIGGHAGK Unmodified 1146.6509 0.65094155 1423 P40926 MDH2 Malate dehydrogenase, mitochondrial yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 46.497 46.665 3 0.017887 51720 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 25.98 17.917 94068000 0 0 0 17510000 3176200 2460800 2880000 6793100 0 5716800 10790000 11649000 3653200 7584400 21855000 57498 1423 51651 484437;484438;484439;484440;484441;484442;484443;484444;484445;484446;484447 384399;384400;384401;384402 384402 4 VNVTTLQDGK Unmodified 1073.5717 0.57168818 2653 Q2NKX8 ERCC6L DNA excision repair protein ERCC-6-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 35.714 34.267 2 0.0047232 43254 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.267 68.563 66242000 0 55872000 0 3527900 2212000 0 4629300 0 0 0 0 0 0 0 0 57499 2653 51652 484448;484449;484450;484451 384403;384404 384403 2 VNVTVDYIRPASPATETVPAFSER Unmodified 2618.334 0.33403068 3039 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching 10 0 7 1 1 1 1 1 1 1 80.098 80.238 3 4.409E-08 92336 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 52.909 45.694 71028000 0 0 0 0 0 7097400 0 0 3182500 11576000 7211700 4850300 0 5181600 31928000 57500 3039 51653 484452;484453;484454;484455;484456;484457;484458 384405;384406;384407 384407 2 VNVVQYPELSDHEFIEEK Unmodified 2174.0532 0.053164368 4345 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 77.429 77.535 3 5.7844E-06 89496 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 74.793 65.04 108880000 0 0 0 0 4541300 9350300 2423200 7553300 6846400 10697000 7970100 13820000 8628300 10553000 26495000 57501 4345 51654 484459;484460;484461;484462;484463;484464;484465;484466;484467;484468;484469 384408;384409;384410;384411;384412;384413;384414;384415;384416;384417;384418;384419;384420;384421 384408 14 VNWATTPSSQK Unmodified 1217.6041 0.60405094 2048;1302 P31483;Q01085 TIA1;TIAL1 Nucleolysin TIA-1 isoform p40;Nucleolysin TIAR no no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 36.068 34.572 2 1.9602E-16 46785 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 190.88 170.55 532000000 121360000 232660000 2621500 0 7812100 19867000 16701000 0 13490000 26603000 0 21387000 20531000 0 48965000 57502 1302;2048 51655 484470;484471;484472;484473;484474;484475;484476;484477;484478;484479;484480;484481;484482 384422;384423;384424;384425;384426;384427;384428;384429;384430;384431;384432;384433;384434;384435 384430 14 VNWTPEINK Unmodified 1099.5662 0.56620887 28 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 0 0 0 By MS/MS 3 0 1 1 60.636 55.835 2 0.03532 68590 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 63.565 31.63 6697100 0 6697100 0 0 0 0 0 0 0 0 0 0 0 0 0 57503 28 51656 484483 384436 384436 1 VNYDTTESK Unmodified 1055.4771 0.47711909 868 P08621 SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 12.258 12.434 2 0.00317 10768 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 128.69 118.27 401380000 0 0 0 0 30143000 25642000 51141000 0 34368000 40451000 39922000 58687000 29508000 30827000 60696000 57504 868 51657 484484;484485;484486;484487;484488;484489;484490;484491;484492;484493 384437;384438;384439;384440;384441;384442;384443;384444;384445;384446;384447 384443 10 VNYEQIVK Unmodified 991.53385 0.53384611 4891 Q9UH92 MLX Max-like protein X yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 47.555 47.788 2 0.0085533 53788 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 85.813 45.61 122070000 0 0 0 0 7121100 8761300 10146000 9804600 7689600 11750000 11890000 17563000 12838000 9188000 15316000 57505 4891 51658 484494;484495;484496;484497;484498;484499;484500;484501;484502;484503;484504 384448;384449;384450;384451;384452;384453;384454 384453 7 VNYHYMSQVK Unmodified 1267.6019 0.60194245 4584 Q9NR09 BIRC6 Baculoviral IAP repeat-containing protein 6 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 40.926 35.784 3 0.01735 49435 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.718 24.909 106570000 97659000 0 8915100 0 0 0 0 0 0 0 0 0 0 0 0 57506 4584 51659 484505;484506 384455 384455 1 VNYQANIWALK Unmodified 1318.7034 0.70337105 2237 Q13126 MTAP S-methyl-5'-thioadenosine phosphorylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.12 3.89 3 1 4 1 2 1 1 1 1 1 79.802 77.566 2 0.00034453 89384 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 99.442 83.56 144260000 79216000 22531000 1689700 0 0 0 0 0 0 0 7306100 4589300 0 6807700 22116000 57507 2237 51660 484507;484508;484509;484510;484511;484512;484513;484514 384456;384457;384458;384459;384460;384461;384462 384457 7 VNYVVQEAIVVIK Unmodified 1472.8603 0.86026563 2178 Q10567 AP1B1 AP-1 complex subunit beta-1 yes yes 0 0 0 By MS/MS 2 0 1 1 91.491 83.36 2 0.0021081 108187 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.55 91.357 8044400 8044400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57508 2178 51661 484515 384463 384463 1 VPAAARAGAIAPCEVTVPAQNTGLGPEK Unmodified 2744.4279 0.42794784 808 P05388;Q8NHW5 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like yes no 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 76.523 70.154 3;4 1.2528E-47 91153 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.139 78.335 274590000 258610000 0 15972000 0 0 0 0 0 0 0 0 0 0 0 0 57509 808 51662 484516;484517;484518 384464;384465;384466 384464 2 VPAAHTTEVTFLK Unmodified 1412.7664 0.76636524 457 O75128 COBL Protein cordon-bleu yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 55.143 55.264 3 0.0032543 61963 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 40.552 20.456 99494000 0 0 0 5435000 6791000 10183000 6434000 5357600 7829400 11326000 14509000 13042000 0 4783500 13804000 57510 457 51663 484519;484520;484521;484522;484523;484524;484525;484526;484527;484528;484529 384467;384468;384469;384470;384471 384471 5 VPAASPSAHSISTATPDR Unmodified 1763.8802 0.8802258 4795 Q9P0L2 MARK1 Serine/threonine-protein kinase MARK1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 36.286 36.291 3 0.041315 40786 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 29.582 9.5728 57104000 0 0 0 7936200 6420800 0 6699400 0 11685000 0 13865000 0 0 10498000 0 57511 4795 51664 484530;484531;484532;484533;484534;484535 384472;384473 384473 0 VPAATSAIITNDGIGINPAQTAGNVFLK Unmodified 2752.4759 0.47594389 1863 P61960 UFM1 Ubiquitin-fold modifier 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 7 3.69 1 1 3 2 1 1 1 93.245 91.725 3 3.2585E-06 113279 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 41.422 34.229 99997000 0 86697000 0 0 0 0 0 0 0 5209800 1966700 0 0 0 6123400 57512 1863 51665 484536;484537;484538;484539;484540 384474;384475;384476;384477 384475 4 VPADTEVVCAPPTAYIDFAR Unmodified 2191.062 0.061954915 1808 P60174 TPI1 Triosephosphate isomerase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.45 3.93 8 1 11 3 4 2 2 1 2 2 2 2 88.148 86.207 2;3 9.076E-237 100286 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 225.09 209.7 5290700000 40051000 4084100000 33943000 8046400 4628100 0 0 0 0 0 151800000 198110000 0 116800000 653230000 57513 1808 51666 484541;484542;484543;484544;484545;484546;484547;484548;484549;484550;484551;484552;484553;484554;484555;484556;484557;484558;484559;484560 384478;384479;384480;384481;384482;384483;384484;384485;384486;384487;384488;384489;384490;384491;384492;384493;384494;384495;384496 384482 19 VPADTEVVCAPPTAYIDFARQK Unmodified 2447.2155 0.21549544 1808 P60174 TPI1 Triosephosphate isomerase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.2 0.4 8 2 3 4 3 85.786 81.297 2;3;4 1.1973E-109 99435 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 184.32 176.33 2020400000 185240000 1437800000 397300000 0 0 0 0 0 0 0 0 0 0 0 0 57514 1808 51667 484561;484562;484563;484564;484565;484566;484567;484568;484569;484570 384497;384498;384499;384500;384501;384502;384503;384504;384505;384506 384505 10 VPAESMPTLTPAFPR Oxidation (M) 1628.8232 0.82322819 3061 Q7LBC6 KDM3B Lysine-specific demethylase 3B yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 1 2 2 2 2 2 72.501 72.566 2 4.9876E-31 83434 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 148.28 139.28 410430000 0 0 0 27505000 36427000 33645000 40893000 31707000 30782000 22859000 39596000 48299000 39488000 28276000 30950000 57515 3061 51668 484571;484572;484573;484574;484575;484576;484577;484578;484579;484580;484581;484582;484583;484584;484585;484586;484587;484588;484589;484590;484591;484592;484593 384507;384508;384509;384510;384511;384512;384513;384514;384515;384516;384517;384518;384519;384520;384521;384522;384523;384524;384525 384513 4685 19 VPAESMPTLTPAFPR Unmodified 1612.8283 0.82831357 3061 Q7LBC6 KDM3B Lysine-specific demethylase 3B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 81.204 81.264 2;3 2.0918E-70 93625 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 179.19 167.98 442530000 0 0 0 15256000 20288000 32262000 19635000 44693000 21868000 40930000 44471000 43457000 30611000 48583000 80473000 57516 3061 51668 484594;484595;484596;484597;484598;484599;484600;484601;484602;484603;484604;484605;484606;484607;484608;484609;484610;484611;484612;484613;484614;484615;484616;484617 384526;384527;384528;384529;384530;384531;384532;384533;384534;384535;384536;384537;384538;384539 384530 14 VPAGNWVLIEGVDQPIVK Unmodified 1933.0673 0.067298289 2481 Q15029 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 89.845 90.016 2 0.0055172 104298 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.023 39.765 6192500 0 0 0 0 0 0 0 546520 982560 1522000 1064800 0 0 0 2076600 57517 2481 51669 484618;484619;484620;484621;484622 384540;384541 384541 2 VPAHPSGNMASFTK Unmodified 1442.6976 0.69763375 1095 P19793 RXRA Retinoic acid receptor RXR-alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 38.622 38.791 3 1.6011E-05 42862 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 86.944 72.153 115480000 0 0 0 6418400 7837000 8931800 10867000 8239200 7094900 10609000 13135000 14695000 8259600 0 19394000 57518 1095 51670 484623;484624;484625;484626;484627;484628;484629;484630;484631;484632;484633;484634 384542;384543;384544;384545;384546;384547;384548;384549;384550;384551;384552 384548 11 VPAIEENLLDDK Unmodified 1354.698 0.6980109 2697 Q53ET0 CRTC2 CREB-regulated transcription coactivator 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 74.424 74.144 2 0.0038646 84884 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.566 64.076 190230000 0 58142000 0 0 0 11303000 12245000 12025000 12061000 13525000 15593000 17613000 12081000 10024000 15615000 57519 2697 51671 484635;484636;484637;484638;484639;484640;484641;484642;484643;484644;484645 384553;384554;384555;384556;384557;384558;384559;384560 384555 7 VPAINVNDSVTK Unmodified 1255.6772 0.67721588 1164 P23526 AHCY Adenosylhomocysteinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.68 3.91 1 5 2 11 1 6 1 1 1 1 1 1 1 1 1 1 1 1 55.914 53.959 2 1.0011E-14 64651 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145.46 108.76 6553500000 163810000 5515500000 39977000 66127000 21062000 0 31455000 30421000 16395000 0 130860000 102490000 0 101840000 333560000 57520 1164 51672 484646;484647;484648;484649;484650;484651;484652;484653;484654;484655;484656;484657;484658;484659;484660;484661;484662;484663;484664 384561;384562;384563;384564;384565;384566;384567;384568;384569;384570;384571;384572;384573;384574;384575;384576;384577;384578;384579;384580;384581;384582;384583;384584 384566 24 VPAIQQK Unmodified 782.46504 0.46503826 5155 Q9Y3C0 CCDC53 WASH complex subunit CCDC53 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 16.156 16.669 2 0.04788 15497 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.263 27.31 14558000 0 0 0 0 0 0 0 0 0 0 0 6690900 0 0 7867100 57521 5155 51673 484665;484666 384585;384586 384585 2 VPAIYGVDTR Unmodified 1089.5819 0.58185893 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 55.032 54.951 2 0.0074 62403 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 62.558 35.42 69824000 0 0 0 9679900 8729300 0 12196000 11474000 0 0 0 0 12473000 15270000 0 57522 1300 51674 484667;484668;484669;484670;484671;484672;484673 384587;384588;384589;384590;384591;384592;384593;384594;384595 384587 9 VPAIYGVDTRMLTK Oxidation (M) 1578.844 0.84396364 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 1 1 By MS/MS 2 0 1 1 73.084 64.888 3 0.011525 85941 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 44.132 32.862 15520000 15520000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57523 1300 51675 484674 384596 384596 1924 1 VPAIYGVDTRMLTK Unmodified 1562.849 0.84904901 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 0 1 By MS/MS 2 0 1 1 80.995 72.864 3 0.019375 95483 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 39.629 35.081 36676000 36676000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57524 1300 51675 484675 384597 384597 1 VPALLENQVEER Unmodified 1395.7358 0.73579339 4115 Q9BRS2 RIOK1 Serine/threonine-protein kinase RIO1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.591 63.683 2 0.00035486 71998 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.015 60.474 84075000 0 0 0 4917100 4470800 5953900 6061700 5149800 3767500 8223900 8819300 11661000 8600700 5934600 10515000 57525 4115 51676 484676;484677;484678;484679;484680;484681;484682;484683;484684;484685;484686;484687 384598;384599;384600;384601;384602;384603;384604;384605;384606;384607;384608;384609;384610 384601 13 VPAPFSPPPSK Unmodified 1122.6073 0.6073454 4802 Q9P206 KIAA1522 Uncharacterized protein KIAA1522 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 51.942 51.996 2 1.9306E-05 58035 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 125.71 110.08 144520000 0 0 0 16191000 14487000 0 13604000 18737000 0 19402000 0 26124000 18109000 17864000 0 57526 4802 51677 484688;484689;484690;484691;484692;484693;484694;484695 384611;384612;384613;384614;384615;384616;384617;384618;384619;384620;384621;384622;384623;384624 384620 14 VPAQANGTPTTK Unmodified 1183.6197 0.619701 4096 Q9BQG0 MYBBP1A Myb-binding protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 13.587 13.776 2 0.00016253 12945 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 105.2 55.362 38292000 0 0 0 0 1663700 2018100 1997700 2026700 2094500 3463400 2952400 6127600 4165100 5247400 6535800 57527 4096 51678 484696;484697;484698;484699;484700;484701;484702;484703;484704;484705;484706 384625;384626;384627;384628;384629;384630;384631;384632 384631 8 VPAQSESVR Unmodified 971.50361 0.50360861 1629 P50552 VASP Vasodilator-stimulated phosphoprotein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.412 12.563 2 0.011398 11880 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 102 64.443 246100000 0 0 0 16324000 14934000 22982000 15106000 12548000 14497000 31320000 15619000 33819000 18443000 18342000 32162000 57528 1629 51679 484707;484708;484709;484710;484711;484712;484713;484714;484715;484716;484717;484718 384633;384634;384635;384636;384637;384638;384639 384633 1 VPASLDVSAEIK Unmodified 1227.6711 0.67106787 5362 yes yes 0 0 0 By MS/MS 10 0 1 1 25.165 24.814 3 0.044628 26563 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 24.254 1.0282 + 6325900000 0 0 0 0 6325900000 0 0 0 0 0 0 0 0 0 0 57529 5362 51680 484719 384640 384640 1 VPASPLPGLER Unmodified 1134.6397 0.63970816 3040 Q7KZI7 MARK2 Serine/threonine-protein kinase MARK2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 64.22 64.303 2 0.0048314 72713 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 60.518 44.637 69246000 0 0 0 3389800 6492100 4778900 4672000 0 4059500 7231200 7999400 7977200 7254300 4140100 11251000 57530 3040 51681 484720;484721;484722;484723;484724;484725;484726;484727;484728;484729;484730 384641;384642;384643;384644;384645 384644 5 VPASQPRPESK Unmodified 1194.6357 0.63568542 2263 Q13283 G3BP1 Ras GTPase-activating protein-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 8.1598 8.2867 3 0.0089191 6831 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 46.73 27.984 37433000 0 0 0 2434500 2041800 3534600 1541500 1249400 3108700 2802000 7072800 5015000 3026300 2121200 3485500 57531 2263 51682 484731;484732;484733;484734;484735;484736;484737;484738;484739;484740;484741;484742 384646;384647 384647 2 VPATLQVLQTLPEENYQVLR Unmodified 2310.2583 0.25834654 2146 Q07960 ARHGAP1 Rho GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 92.04 92.168 3 0.001895 106812 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.237 33.743 5253900 0 0 0 0 0 0 0 0 0 2894600 0 0 0 0 2359300 57532 2146 51683 484743;484744 384648;384649 384649 2 VPAVANYIMK Unmodified 1104.6002 0.60015154 4371 Q9H2P0 ADNP Activity-dependent neuroprotector homeobox protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 72.841 71.892 2 0.020711 82195 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.082 31.711 36994000 4654200 0 0 0 0 0 0 4673400 3192700 0 6106500 4976800 0 4567000 8823700 57533 4371 51684 484745;484746;484747;484748;484749;484750;484751 384650;384651;384652;384653 384650 4 VPCNFSVTAACYDPSK Unmodified 1814.7968 0.79675545 4954 Q9UK59 DBR1 Lariat debranching enzyme yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 72.707 67.162 2 3.3373E-103 84895 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 218.5 203.62 41992000 0 41992000 0 0 0 0 0 0 0 0 0 0 0 0 0 57534 4954 51685 484752;484753 384654;384655 384654 2 VPCNVEGISPELEK Unmodified 1569.7709 0.77085827 3171 Q86VQ1 GLCCI1 Glucocorticoid-induced transcript 1 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 63.324 63.487 2 1.434E-08 72600 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 116.54 101.57 76062000 0 0 0 0 7077400 5579000 7013300 0 7027600 7843900 8957700 11722000 6583000 5861300 8396200 57535 3171 51686 484754;484755;484756;484757;484758;484759;484760;484761;484762;484763;484764 384656;384657;384658;384659;384660;384661;384662;384663;384664;384665;384666;384667 384657 11 VPDCFQR Unmodified 920.41744 0.41743614 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 28.071 28.389 2 0.050333 29625 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.714 28.976 46704000 0 0 0 5260600 0 0 0 0 4613900 0 0 10890000 7948300 8402200 9589100 57536 619 51687 484765;484766;484767;484768;484769;484770 384668 384668 1 VPDCFQRTPK Unmodified 1246.6128 0.61284149 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 0 1 By MS/MS 2 0 1 1 34.353 28.121 3 0.028247 39397 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.727 29.408 16091000 16091000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57537 619 51688 484771 384669 384669 1 VPDESEVVVER Unmodified 1256.6248 0.62484596 2150 Q08188 TGM3 Protein-glutamine gamma-glutamyltransferase E;Protein-glutamine gamma-glutamyltransferase E 50 kDa catalytic chain;Protein-glutamine gamma-glutamyltransferase E 27 kDa non-catalytic chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 43.458 43.635 2 4.1283E-21 49627 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 198.72 177.74 174370000 0 0 0 40153000 6274500 13119000 6831200 27621000 0 8697000 13525000 28238000 11478000 9354000 9079600 57538 2150 51689 484772;484773;484774;484775;484776;484777;484778;484779;484780;484781;484782 384670;384671;384672;384673;384674;384675;384676 384676 7 VPDGKPENEFAFNAEFK Unmodified 1937.9159 0.9159426 2505 Q15181 PPA1 Inorganic pyrophosphatase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 3.25 2.59 5 2 1 2 4 1 1 77.834 73.456 2;3 7.5354E-19 88433 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 93.152 82.108 1166800000 255810000 717340000 135660000 0 0 0 0 0 0 0 0 0 0 0 58004000 57539 2505 51690 484783;484784;484785;484786;484787;484788;484789;484790 384677;384678;384679;384680;384681;384682;384683;384684;384685 384681 7 VPDGKPENQFAFNGEFK Unmodified 1922.9163 0.91627696 4374 Q9H2U2 PPA2 Inorganic pyrophosphatase 2, mitochondrial yes yes 0 0 1 By MS/MS 2 0 1 1 74.804 69.649 3 0.0030285 87412 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 50.831 40.91 52423000 0 52423000 0 0 0 0 0 0 0 0 0 0 0 0 0 57540 4374 51691 484791 384686 384686 1 VPDGMVGFIIGR Unmodified 1259.6696 0.66962808 3737 Q96AE4 FUBP1 Far upstream element-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 87.281 87.35 2 0.0055203 101323 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.557 60.025 166970000 0 0 0 2504000 4106400 7196900 5981200 8212000 8954300 14308000 10755000 17350000 6134500 15198000 66273000 57541 3737 51692 484792;484793;484794;484795;484796;484797;484798;484799;484800;484801;484802;484803 384687;384688;384689;384690;384691;384692;384693;384694;384695;384696;384697 384692 11 VPDGMVGFIIGR Oxidation (M) 1275.6645 0.66454271 3737 Q96AE4 FUBP1 Far upstream element-binding protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.554 76.591 2 0.0001206 87525 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 111.61 89.37 249990000 0 0 0 8396800 13678000 20411000 23266000 13236000 24024000 33624000 30680000 36182000 18112000 28376000 0 57542 3737 51692 484804;484805;484806;484807;484808;484809;484810;484811;484812;484813;484814 384698;384699;384700;384701;384702;384703;384704;384705;384706;384707;384708 384704 5317 1 VPDPQMSMENLVESK Unmodified 1702.7906 0.79060744 3422 Q8NEB9 PIK3C3 Phosphatidylinositol 3-kinase catalytic subunit type 3 yes yes 0 0 0 By MS/MS 2 0 1 1 80.804 76.099 2 1.7693E-90 94638 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 240.11 215.26 136050000 0 136050000 0 0 0 0 0 0 0 0 0 0 0 0 0 57543 3422 51693 484815 384709 384709 1 VPDPQMSMENLVESK Oxidation (M) 1718.7855 0.78552206 3422 Q8NEB9 PIK3C3 Phosphatidylinositol 3-kinase catalytic subunit type 3 yes yes 0 1 0 By MS/MS 3 0 1 1 76.241 72.763 2 0.025531 87461 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 40.589 25.899 2471900 0 2471900 0 0 0 0 0 0 0 0 0 0 0 0 0 57544 3422 51693 484816 384710 384710 1 VPDQGAAGVR Unmodified 968.50394 0.50394297 2215 Q12965 MYO1E Unconventional myosin-Ie yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.959 17.139 2 0.0043267 17522 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 73.248 45.04 80183000 0 0 0 4873700 5478400 5548500 4601500 5139900 4347600 4667000 7406500 12148000 8450400 5242500 12279000 57545 2215 51694 484817;484818;484819;484820;484821;484822;484823;484824;484825;484826;484827;484828 384711;384712;384713;384714;384715;384716 384711 5 VPDRGGRPNEIEPPPPEMPPWQK Oxidation (M) 2638.2962 0.29620538 2693;3407 Q52LJ0;Q8NCA5 FAM98B;FAM98A Protein FAM98B;Protein FAM98A no no 0 1 2 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 60.591 60.79 4 6.3808E-07 69377 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 52.483 45.883 37116000 0 0 0 0 0 7438600 6082800 5413300 0 0 0 8057500 5646100 4477700 0 57546 2693;3407 51695 484829;484830;484831;484832;484833;484834 384717;384718;384719 384717 4347 3 VPDSTYEMIGGLDK Oxidation (M) 1539.7127 0.71267469 1876 P62195 PSMC5 26S protease regulatory subunit 8 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 60.935 59.508 2 1.2058E-05 68362 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 88.187 77.663 798130000 11838000 435530000 0 26619000 29093000 27287000 15820000 11994000 8769300 54435000 48445000 69001000 15423000 17286000 26586000 57547 1876 51696 484835;484836;484837;484838;484839;484840;484841;484842;484843;484844;484845;484846;484847;484848;484849;484850 384720;384721;384722;384723;384724;384725;384726;384727;384728;384729;384730;384731;384732;384733;384734;384735;384736 384736 3046 17 VPDSTYEMIGGLDK Unmodified 1523.7178 0.71776007 1876 P62195 PSMC5 26S protease regulatory subunit 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 75.264 73.902 2;3 1.8515E-29 91636 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 179.94 164.31 1949200000 25098000 1454500000 9745200 25425000 38890000 31970000 9939700 10922000 10751000 70359000 85867000 92091000 10733000 16903000 56007000 57548 1876 51696 484851;484852;484853;484854;484855;484856;484857;484858;484859;484860;484861;484862;484863;484864;484865;484866;484867 384737;384738;384739;384740;384741;384742;384743;384744;384745;384746;384747;384748;384749;384750;384751;384752 384740 16 VPDTDEISFLK Unmodified 1262.6394 0.63943339 1116 P20936 RASA1 Ras GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 79.682 76.111 2 0.0051886 91286 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 86.624 71.473 122120000 0 119800000 2319900 0 0 0 0 0 0 0 0 0 0 0 0 57549 1116 51697 484868;484869;484870 384753;384754;384755 384754 2 VPDVDIK Unmodified 784.43307 0.43306943 2172;1542 Q09666;P48552 AHNAK;NRIP1 Neuroblast differentiation-associated protein AHNAK;Nuclear receptor-interacting protein 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 38.658 38.821 2 0.024937 43494 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 81.784 14.749 805500000 0 0 0 64978000 68215000 0 0 94764000 65868000 83493000 0 145840000 122990000 0 159360000 57550 2172;1542 51698 484871;484872;484873;484874;484875;484876;484877;484878 384756;384757;384758;384759 384756 4 VPDVELK Unmodified 798.44872 0.4487195 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 4 1 2 1 44.88 39.433 2 0.023604 52046 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.45 0 595920000 7751100 583010000 5163200 0 0 0 0 0 0 0 0 0 0 0 0 57551 2172 51699 484879;484880;484881;484882 384760;384761 384761 2 VPEEDLK Unmodified 828.4229 0.42289868 4065 Q99832 CCT7 T-complex protein 1 subunit eta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.407 20.608 2 0.023435 21586 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 85.265 42.265 902430000 0 0 0 48662000 42141000 81489000 67293000 51345000 41602000 66282000 92854000 93393000 104620000 78494000 134260000 57552 4065 51700 484883;484884;484885;484886;484887;484888;484889;484890;484891;484892;484893;484894 384762 384762 1 VPEELQDK Unmodified 956.48148 0.48147619 497 O75420 GIGYF1 PERQ amino acid-rich with GYF domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 22.893 22.984 2 0.038354 23791 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 51.059 32.284 70690000 0 0 0 4928200 6470300 6277300 6691300 5395300 5499100 9523400 14252000 0 11653000 0 0 57553 497 51701 484895;484896;484897;484898;484899;484900;484901;484902;484903 384763;384764 384763 2 VPEESVLPLVQK Unmodified 1336.7602 0.76021723 4976 Q9UKV3 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.91 3.42 2 1 8 2 1 1 1 1 1 1 1 1 1 77.702 75.035 2 7.2991E-65 93418 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 215.93 200.27 705470000 0 679840000 6018100 0 0 0 19616000 0 0 0 0 0 0 0 0 57554 4976 51702 484904;484905;484906;484907;484908;484909;484910;484911;484912;484913;484914 384765;384766;384767;384768;384769;384770;384771;384772;384773;384774;384775 384768 10 VPEGGEGISATEVDSR Unmodified 1601.7533 0.75329395 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 44.129 44.381 2 0.027848 49870 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 43.991 29.833 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57555 5049 51703 484915;484916 384776;384777 384776 2 VPEGVAGAPNEAALLALMER Oxidation (M) 2023.0408 0.040825542 2 A0AV96 RBM47 RNA-binding protein 47 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 19 1 2 2 2 1 2 2 2 2 2 1 84.398 84.514 2;3 4.4517E-53 97884 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 119.45 108.84 484890000 0 0 0 0 5809700 47773000 40427000 49293000 40496000 74822000 62058000 68414000 35851000 39757000 20187000 57556 2 51704 484917;484918;484919;484920;484921;484922;484923;484924;484925;484926;484927;484928;484929;484930;484931;484932;484933;484934;484935 384778;384779;384780;384781;384782;384783;384784;384785;384786;384787;384788;384789;384790;384791;384792;384793 384781 4 13 VPEGVAGAPNEAALLALMER Unmodified 2007.0459 0.04591092 2 A0AV96 RBM47 RNA-binding protein 47 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 2 2 1 2 93.438 93.591 2;3 4.9032E-10 108624 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.904 76.625 20195000 0 0 0 0 0 0 0 760970 0 4333200 3490000 0 0 735420 10875000 57557 2 51704 484936;484937;484938;484939;484940;484941;484942;484943 384794;384795;384796;384797;384798 384797 5 VPEIEVTVEGPNNNNPQTSAVR Unmodified 2363.1717 0.17171637 1977 P78347 GTF2I General transcription factor II-I yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 2 2 2 1 2 1 2 2 2 2 2 72.002 72.094 2;3 3.5994E-154 83039 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 144.27 137.16 421240000 0 0 0 4134000 27303000 37808000 18320000 15373000 35646000 53414000 50007000 47821000 25010000 36693000 69716000 57558 1977 51705 484944;484945;484946;484947;484948;484949;484950;484951;484952;484953;484954;484955;484956;484957;484958;484959;484960;484961;484962;484963;484964 384799;384800;384801;384802;384803;384804;384805;384806;384807;384808;384809;384810;384811;384812;384813;384814;384815 384802 16 VPEILQLSDALR Unmodified 1352.7664 0.76636524 1579 P49589 CARS Cysteine--tRNA ligase, cytoplasmic yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 88.293 88.467 2 0.00075683 102379 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.944 60.646 5257200 0 0 0 0 0 0 0 745010 0 0 0 0 0 0 4512200 57559 1579 51706 484965;484966 384816 384816 1 VPELFANR Unmodified 944.50797 0.50796571 1078 P18754 RCC1 Regulator of chromosome condensation yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 56.199 56.803 2 0.022194 64204 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 61.357 19.855 59965000 0 0 0 0 0 0 0 0 0 0 0 14637000 0 0 45329000 57560 1078 51707 484967;484968 384817 384817 1 VPELMEMFLPATK Unmodified 1504.767 0.76695887 362 O43747 AP1G1 AP-1 complex subunit gamma-1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 99.511 93.089 2 5.9791E-10 117696 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 116.54 104.33 23984000 10203000 13781000 0 0 0 0 0 0 0 0 0 0 0 0 0 57561 362 51708 484969;484970 384818;384819 384819 2 VPELNVQNGVLK Unmodified 1308.7402 0.74015049 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.131 69.208 2 4.2508E-81 79721 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 226.09 181.7 414990000 0 0 0 16488000 21917000 26268000 36200000 29864000 17055000 33668000 34309000 47203000 39143000 39278000 73601000 57562 516 51709 484971;484972;484973;484974;484975;484976;484977;484978;484979;484980;484981;484982 384820;384821;384822;384823;384824;384825;384826;384827;384828;384829;384830;384831;384832;384833 384821 14 VPELPLMNLENSK Unmodified 1482.7752 0.77521537 2842 Q659A1 ICE2 Little elongation complex subunit 2 yes yes 0 0 0 By MS/MS 2 0 1 1 91.199 86.288 2 0.0024578 107241 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.043 58.719 24104000 0 24104000 0 0 0 0 0 0 0 0 0 0 0 0 0 57563 2842 51710 484983 384834 384834 1 VPELYEIHK Unmodified 1126.6023 0.60226003 942 P11274 BCR Breakpoint cluster region protein yes yes 0 0 0 By MS/MS 2 0 1 1 55.126 51.25 2 0.022185 64221 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 73.26 42.186 3578700 0 0 3578700 0 0 0 0 0 0 0 0 0 0 0 0 57564 942 51711 484984 384835 384835 1 VPEPCHPK Unmodified 962.46439 0.46438634 1139;1353 P22528;P35321 SPRR1B;SPRR1A Cornifin-B;Cornifin-A no no 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 11.435 11.545 2 0.0074646 10465 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 89.55 40.191 132740000 0 0 0 112600000 1576900 2219000 1707700 0 0 2025200 0 2860900 6678100 1610900 1466000 57565 1139;1353 51712 484985;484986;484987;484988;484989;484990;484991;484992;484993 384836 384836 1 VPEPCPSIVTPAPAQQK Unmodified 1817.9346 0.93456956 1139 P22528 SPRR1B Cornifin-B yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 5 2 1 1 1 61.944 61.672 2;3 5.6516E-25 70895 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 107.85 99.334 243890000 0 0 0 232850000 2394300 0 0 0 0 0 4170400 0 4468200 0 0 57566 1139 51713 484994;484995;484996;484997;484998 384837;384838;384839;384840 384838 4 VPEPCPSTVTPAPAQQK Unmodified 1805.8982 0.89818405 1353 P35321 SPRR1A Cornifin-A yes yes 0 0 0 By MS/MS By matching By matching By MS/MS 10 0 5 2 1 1 1 46.638 46.689 2;3 2.7165E-18 52980 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 116.71 92.204 133740000 0 0 0 123470000 0 0 0 0 0 0 5577000 2329300 0 2367800 0 57567 1353 51714 484999;485000;485001;485002;485003 384841;384842 384841 1 VPEPCQPK Unmodified 953.46405 0.46405199 1139;1353 P22528;P35321 SPRR1B;SPRR1A Cornifin-B;Cornifin-A no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 2 1 1 1 1 1 1 18.804 19.059 2 0.0063409 19335 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 101.69 46.25 524530000 0 0 0 480270000 0 0 0 8542000 0 8551700 11187000 8919500 0 3131000 3926900 57568 1139;1353 51715 485004;485005;485006;485007;485008;485009;485010;485011 384843;384844;384845 384845 2 VPEPEALDLPDDLNLDSEDK Unmodified 2223.0431 0.043053191 4641 Q9NU22 MDN1 Midasin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.42 3.66 3 1 8 1 3 1 1 1 1 1 1 2 88.226 86.548 2;3 3.913E-151 106290 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 218.4 204.37 121800000 12170000 75759000 0 0 0 3388400 0 0 0 5088700 3781300 5450900 2423400 3365500 10371000 57569 4641 51716 485012;485013;485014;485015;485016;485017;485018;485019;485020;485021;485022;485023 384846;384847;384848;384849;384850;384851;384852;384853;384854;384855 384848 10 VPEPGVPTETIK Unmodified 1265.6867 0.68671794 2035 Q00534 CDK6 Cyclin-dependent kinase 6 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 58.083 52.749 2 3.1105E-14 67642 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145.99 104.01 238110000 0 238110000 0 0 0 0 0 0 0 0 0 0 0 0 0 57570 2035 51717 485024;485025 384856 384856 1 VPEPNENVGDAVQTK Unmodified 1595.7791 0.77911477 3084 Q7Z3K3 POGZ Pogo transposable element with ZNF domain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.791 42.967 2 6.927E-150 47736 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 217.91 193.82 199240000 0 0 0 15827000 16560000 14285000 15978000 16235000 13035000 14498000 16654000 16375000 20211000 16656000 22927000 57571 3084 51718 485026;485027;485028;485029;485030;485031;485032;485033;485034;485035;485036;485037 384857;384858;384859;384860;384861;384862;384863;384864;384865;384866;384867;384868 384866 12 VPEQQRQITLK Unmodified 1338.7619 0.76194857 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 36.447 31.529 3 0.0061384 43764 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.439 41.718 579810000 484460000 36775000 58571000 0 0 0 0 0 0 0 0 0 0 0 0 57572 965 51719 485038;485039;485040 384869 384869 1 VPETVSAATQTIK Unmodified 1343.7296 0.72964538 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 49.404 49.876 2 2.4326E-08 55274 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 135.8 94.347 16490000 0 0 0 0 0 0 0 0 0 0 0 0 0 5043600 11446000 57573 2203 51720 485041;485042;485043 384870;384871;384872 384870 3 VPEVELK Unmodified 812.46437 0.46436956 3868 Q96HN2 AHCYL2 Putative adenosylhomocysteinase 3 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS 7.75 3.9 1 3 1 1 1 1 84.736 86.19 2 0.025533 90602 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 100.07 27.028 38609000 30463000 0 0 0 0 0 0 0 0 0 2728900 0 1135500 0 4281700 57574 3868 51721 485044;485045;485046;485047 384873;384874 384874 2 VPEVPTAPATDAAPK Unmodified 1462.7668 0.76675917 4898 Q9UHD8 SEPT9 Septin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.43 2.06 1 13 1 1 1 1 1 1 1 1 1 1 2 1 1 53.875 53.553 2 7.511E-07 60731 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 94.191 62.761 384730000 0 18620000 0 21069000 27010000 27785000 30750000 28343000 22897000 34118000 44025000 45304000 31289000 20100000 33423000 57575 4898 51722 485048;485049;485050;485051;485052;485053;485054;485055;485056;485057;485058;485059;485060;485061 384875;384876;384877;384878;384879;384880;384881;384882;384883;384884;384885;384886;384887;384888 384877 12 VPEVTCIPTTATLATHPSAK Unmodified 2093.0827 0.082690357 4399 Q9H4I2 ZHX3 Zinc fingers and homeoboxes protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.24 2 1 10 2 1 1 1 1 1 1 1 1 1 1 1 72.721 71.902 3 1.8265E-07 90860 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.458 57.303 88178000 0 40222000 2396700 3884000 3146000 3186600 3603600 3916400 0 5667900 6451300 4854300 0 5691200 5158000 57576 4399 51723 485062;485063;485064;485065;485066;485067;485068;485069;485070;485071;485072;485073;485074 384889;384890;384891;384892;384893;384894;384895;384896;384897;384898;384899;384900;384901;384902;384903 384892 14 VPEVVALGAAEK Unmodified 1181.6656 0.66558856 2479 Q15025 TNIP1 TNFAIP3-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 62.962 63.046 2 0.0060586 71949 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 62.408 40.944 30066000 0 0 0 0 3491600 5197100 5092600 0 4100400 0 0 0 3505300 0 8679200 57577 2479 51724 485075;485076;485077;485078;485079;485080 384904;384905;384906;384907;384908;384909 384905 6 VPEWVDTVK Unmodified 1071.5601 0.56006086 1401 P39019 RPS19 40S ribosomal protein S19 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 63.947 62.024 2 0.00061025 80119 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.52 101.96 2389600000 96464000 1619700000 59997000 64834000 80738000 78950000 50924000 59434000 62621000 100270000 0 0 115700000 0 0 57578 1401 51725 485081;485082;485083;485084;485085;485086;485087;485088;485089;485090;485091;485092;485093;485094 384910;384911;384912;384913;384914;384915;384916;384917;384918;384919;384920;384921;384922;384923;384924;384925;384926;384927 384915 17 VPFCPMVGSEVYSTEIK Oxidation (M) 1957.9165 0.91653623 5086 Q9Y265 RUVBL1 RuvB-like 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.3 3.22 4 1 18 1 2 2 1 2 1 2 1 2 1 1 2 2 2 1 79.287 78.414 2;3 6.0741E-144 91027 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 207.66 202.74 1065200000 14081000 498430000 25917000 9767200 34284000 30901000 30252000 32167000 37809000 54676000 43145000 82949000 39138000 60895000 70760000 57579 5086 51726 485095;485096;485097;485098;485099;485100;485101;485102;485103;485104;485105;485106;485107;485108;485109;485110;485111;485112;485113;485114;485115;485116;485117 384928;384929;384930;384931;384932;384933;384934;384935;384936;384937;384938;384939;384940;384941;384942;384943;384944;384945;384946;384947;384948 384930 6479 20 VPFCPMVGSEVYSTEIK Unmodified 1941.9216 0.92162161 5086 Q9Y265 RUVBL1 RuvB-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.08 3.93 5 1 6 1 3 2 1 1 1 1 1 1 84.976 82.884 2;3 7.0898E-87 103093 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 204.48 160.49 1467400000 14037000 1376600000 13392000 0 0 5639700 0 6974200 0 0 8223000 0 4126200 9280300 29112000 57580 5086 51726 485118;485119;485120;485121;485122;485123;485124;485125;485126;485127;485128;485129 384949;384950;384951;384952;384953;384954;384955;384956;384957;384958;384959;384960;384961;384962 384949 13 VPFCPMVGSEVYSTEIKK Unmodified 2070.0166 0.016584627 5086 Q9Y265 RUVBL1 RuvB-like 1 yes yes 0 0 1 By MS/MS 2 0 1 1 83.742 75.611 3 0.064245 98876 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 22.646 12.988 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57581 5086 51727 485130 384963 384963 1 VPFESEDNQGIVYAWVGRASDPDEAK Unmodified 2878.341 0.34096655 2228 Q13045 FLII Protein flightless-1 homolog yes yes 0 0 1 By MS/MS 2 0 1 1 91.434 83.304 3 3.476E-31 108185 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 128.97 116.48 14502000 14502000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57582 2228 51728 485131 384964;384965 384965 2 VPFLEVNDPGEPSGLETLK Unmodified 2040.0415 0.041537049 907 P0DMM9;P0DMN0 SULT1A3;SULT1A4 Sulfotransferase 1A3;Sulfotransferase 1A4 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 2 2 1 1 1 2 2 2 1 2 2 86.394 86.489 2;3 4.5477E-47 100409 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 161.04 161.04 141560000 0 0 0 0 5452900 16342000 3845400 6555100 4675400 29400000 16469000 21190000 4082100 8919500 24625000 57583 907 51729 485132;485133;485134;485135;485136;485137;485138;485139;485140;485141;485142;485143;485144;485145;485146;485147;485148;485149 384966;384967;384968;384969;384970;384971;384972;384973;384974;384975;384976;384977;384978 384976 13 VPFLVAETPR Unmodified 1127.6339 0.63389451 2238 Q13131 PRKAA1 5'-AMP-activated protein kinase catalytic subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 73.879 73.995 2 0.0035453 85264 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 76.1 48.471 172880000 0 0 0 0 9921200 17863000 14962000 10304000 10383000 18357000 18021000 19509000 14126000 13720000 25714000 57584 2238 51730 485150;485151;485152;485153;485154;485155;485156;485157;485158;485159;485160 384979;384980;384981;384982;384983;384984;384985;384986;384987;384988;384989 384979 11 VPFNVDFDK Unmodified 1079.5288 0.52876073 2838 Q63HN8 RNF213 E3 ubiquitin-protein ligase RNF213 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 71.707 71.808 2 0.013982 82548 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 58.981 36.85 28412000 0 0 0 0 1660300 4362400 2470500 2719500 1647000 4366800 3890500 0 0 0 7295500 57585 2838 51731 485161;485162;485163;485164;485165;485166;485167;485168 384990;384991;384992 384992 3 VPFSLLR Unmodified 830.50142 0.50142377 786 P04792 HSPB1 Heat shock protein beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.499 74.564 2 0.023018 85642 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 103.29 43.645 881450000 0 0 0 64523000 40781000 48359000 69099000 47021000 48136000 83267000 82789000 90654000 62807000 70959000 173060000 57586 786 51732 485169;485170;485171;485172;485173;485174;485175;485176;485177;485178;485179;485180 384993;384994;384995;384996;384997 384996 5 VPFSPGPAPPPHMGELDQER Oxidation (M) 2173.0262 0.026238111 2994 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 58.164 58.437 3 1.6393E-11 66364 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 79.88 71.592 107960000 0 0 0 0 0 13482000 0 8384400 0 18568000 0 23013000 17240000 10920000 16347000 57587 2994 51733 485181;485182;485183;485184;485185;485186;485187 384998;384999;385000;385001;385002;385003;385004 385004 4613 7 VPFSPGPAPPPHMGELDQER Unmodified 2157.0313 0.031323489 2994 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 71.12 71.203 3 2.7477E-05 81943 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 56.081 45.613 100820000 0 0 0 3604200 3827700 0 4256000 7979800 4522700 11212000 9531800 15248000 8873700 8918700 22840000 57588 2994 51733 485188;485189;485190;485191;485192;485193;485194;485195;485196;485197;485198 385005;385006;385007;385008;385009;385010;385011;385012;385013;385014 385010 10 VPGAGTAPK Unmodified 796.4443 0.44430282 3588 Q8WXE0 CASKIN2 Caskin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 12.257 12.434 2 0.016297 11680 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 56.659 15.357 56398000 0 0 0 4129600 0 6363700 0 4156200 7058300 7919100 6542200 7577000 6965800 5686200 0 57589 3588 51734 485199;485200;485201;485202;485203;485204;485205;485206;485207 385015 385015 1 VPGDAVIMPFR Oxidation (M) 1216.6274 0.62742892 4288 Q9C0D5 TANC1 Protein TANC1 yes yes 0 1 0 By MS/MS 10 0 1 1 70.426 70.775 2 0.0097737 81412 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 45.161 32.142 2782900 0 0 0 0 0 0 0 0 0 0 0 2782900 0 0 0 57590 4288 51735 485208 385016 385016 5756 1 VPGEGLPLPK Unmodified 1005.5859 0.58588168 1191 P25685 DNAJB1 DnaJ homolog subfamily B member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 64.869 63.309 2 0.015626 77835 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 68.224 45.204 713070000 6284600 420330000 8807100 13925000 12820000 0 20218000 13570000 16095000 32387000 31016000 0 22633000 35636000 79344000 57591 1191 51736 485209;485210;485211;485212;485213;485214;485215;485216;485217;485218;485219;485220;485221;485222 385017;385018;385019;385020;385021;385022;385023 385021 4 VPGEQGSDEEHCK Unmodified 1470.6045 0.60452123 5041 Q9UNS1 TIMELESS Protein timeless homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8 3.33 2 2 11 4 1 1 1 1 1 1 1 1 1 1 1 7.9335 7.1421 2;3 1.6201E-06 7811 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 103.14 97.529 99926000 0 47582000 0 1883800 2001700 4199400 2284300 2124700 0 4551700 11831000 6725600 5358300 5915800 5467400 57592 5041 51737 485223;485224;485225;485226;485227;485228;485229;485230;485231;485232;485233;485234;485235;485236;485237 385024;385025;385026;385027;385028;385029;385030;385031 385028 7 VPGFVGSPLAAMNPK Oxidation (M) 1499.7806 0.7806351 3133 Q86TB9 PATL1 Protein PAT1 homolog 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 71.711 71.915 2 0.0012862 82535 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 49.466 38.636 11318000 0 0 0 0 0 0 3176500 3124000 0 0 0 3770700 0 1246800 0 57593 3133 51738 485238;485239;485240;485241 385032;385033 385032 4756 2 VPGGEQEDAESR Unmodified 1272.5582 0.55822296 2838 Q63HN8 RNF213 E3 ubiquitin-protein ligase RNF213 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 12.391 12.569 2 0.015879 11820 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 42.802 27.652 20319000 0 0 0 0 884590 2349100 975770 1312100 1159200 3113800 1563100 2102200 1891300 2209900 2758200 57594 2838 51739 485242;485243;485244;485245;485246;485247;485248;485249;485250;485251;485252 385034;385035;385036;385037 385035 4 VPGGEQEDAESRYLLVLTK Unmodified 2103.0848 0.084798847 2838 Q63HN8 RNF213 E3 ubiquitin-protein ligase RNF213 yes yes 0 0 1 By MS/MS 2 0 1 1 82.552 80.09 3 0.014578 97043 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 32.387 22.857 2401800 0 0 2401800 0 0 0 0 0 0 0 0 0 0 0 0 57595 2838 51740 485253 385038 385038 1 VPGGPPASNLRK Unmodified 1191.6724 0.67240528 3432 Q8NEY1 NAV1 Neuron navigator 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 23.955 24.193 3 0.0015699 25520 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 56.122 40.493 96339000 0 0 0 6331700 8212100 11503000 0 0 0 9897000 15000000 13243000 12724000 7253900 12175000 57596 3432 51741 485254;485255;485256;485257;485258;485259;485260;485261;485262 385039;385040;385041;385042;385043;385044 385039 5 VPGGSPLGVSLVYSDK Unmodified 1573.8352 0.83517309 3968 Q96RK0 CIC Protein capicua homolog yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 79.228 79.317 2 0.010995 91298 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.135 44.751 24265000 0 0 0 0 3127600 0 0 0 4510900 0 4608900 0 0 5457000 6560800 57597 3968 51742 485263;485264;485265;485266;485267 385045 385045 1 VPGIDATTK Unmodified 900.49165 0.49164694 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.635 29.827 2 0.028589 32372 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 82.426 35.762 379960000 0 0 0 22306000 21474000 22737000 33146000 2770600 31064000 27797000 31064000 43055000 54767000 37345000 52438000 57598 2172 51743 485268;485269;485270;485271;485272;485273;485274;485275;485276;485277;485278;485279 385046 385046 0 VPGISSIEQGMTGLK Unmodified 1515.7967 0.79667909 3120 Q7Z739 YTHDF3 YTH domain-containing family protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 82.189 81.072 2 6.8282E-130 93511 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 244.18 204.88 1039600000 25817000 218010000 14086000 9410100 17701000 49107000 29770000 40048000 42411000 93845000 87221000 68040000 43388000 84086000 216650000 57599 3120 51744 485280;485281;485282;485283;485284;485285;485286;485287;485288;485289;485290;485291;485292;485293;485294;485295 385047;385048;385049;385050;385051;385052;385053;385054;385055;385056;385057;385058;385059;385060;385061;385062;385063 385050 17 VPGISSIEQGMTGLK Oxidation (M) 1531.7916 0.79159371 3120 Q7Z739 YTHDF3 YTH domain-containing family protein 3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.64 2.9 1 1 9 1 1 1 1 1 1 1 1 1 1 1 68.923 67.838 2 1.1839E-10 78461 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 97.299 85.663 583490000 10086000 16285000 0 40229000 50504000 0 79975000 46398000 0 0 95510000 54521000 49638000 63814000 76528000 57600 3120 51744 485296;485297;485298;485299;485300;485301;485302;485303;485304;485305;485306 385064;385065;385066;385067;385068;385069;385070;385071;385072;385073 385071 4745 6 VPGLPMSDQYVK Unmodified 1332.6748 0.67477304 193 O14617 AP3D1 AP-3 complex subunit delta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.91 3.42 2 1 8 1 2 1 1 1 1 1 1 1 1 71.999 70.473 2 0.002099 88115 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.82 88.048 783310000 10657000 614890000 0 0 0 16817000 0 13602000 11858000 23220000 28586000 28746000 0 0 34934000 57601 193 51745 485307;485308;485309;485310;485311;485312;485313;485314;485315;485316;485317 385074;385075;385076;385077;385078;385079;385080;385081;385082;385083;385084 385077 10 VPGLPMSDQYVK Oxidation (M) 1348.6697 0.66968766 193 O14617 AP3D1 AP-3 complex subunit delta-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 61.147 59.004 2 0.0004869 68345 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 75.197 64.046 169970000 0 144990000 0 11941000 0 0 0 0 13044000 0 0 0 0 0 0 57602 193 51745 485318;485319;485320;485321;485322 385085;385086;385087;385088;385089 385089 265 5 VPGLPTPIENMILR Oxidation (M) 1564.8647 0.86469908 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 1 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 15 1 2 1 1 2 2 1 1 2 2 85.307 85.414 2 0.00041683 98468 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.906 51.097 106430000 0 0 0 0 4079200 11012000 0 3664500 2644000 16878000 15007000 7979700 5072300 12525000 27566000 57603 2930 51746 485323;485324;485325;485326;485327;485328;485329;485330;485331;485332;485333;485334;485335;485336;485337 385090;385091;385092 385091 4560 2 VPGLQNEQK Unmodified 1011.5349 0.53490874 3576 Q8WWM7 ATXN2L Ataxin-2-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 23.293 22.87 2 6.093E-07 22850 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 173.69 124.24 404740000 0 166750000 0 11920000 9521000 12897000 13130000 12856000 12164000 25087000 23184000 37633000 22688000 22728000 34189000 57604 3576 51747 485338;485339;485340;485341;485342;485343;485344;485345;485346;485347;485348;485349;485350;485351 385093;385094;385095;385096;385097;385098;385099;385100;385101;385102;385103;385104;385105;385106;385107;385108 385104 7 VPGLYVIDSIVR Unmodified 1329.7656 0.76563696 5050;621 O95104;Q9UPN6 SCAF4;SCAF8 Splicing factor, arginine/serine-rich 15;Protein SCAF8 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 91.01 91.118 2 0.00095704 105699 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 84.17 68.541 37930000 0 0 0 0 1348400 1755600 1357400 3419600 2593600 7553300 3101500 2792200 1361000 2701800 9945600 57605 621;5050 51748 485352;485353;485354;485355;485356;485357;485358;485359;485360;485361;485362 385109;385110;385111;385112;385113;385114;385115;385116;385117;385118 385110 10 VPGNQAAVQR Unmodified 1038.557 0.55704117 4517 Q9HCK8 CHD8 Chromodomain-helicase-DNA-binding protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.05 14.213 2 0.0028167 13469 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 79.809 66.821 95846000 0 0 0 6489500 5655000 6969900 6341500 4209400 4683900 10937000 8917500 10516000 10010000 8300900 12815000 57606 4517 51749 485363;485364;485365;485366;485367;485368;485369;485370;485371;485372;485373;485374 385119;385120;385121;385122;385123;385124;385125;385126;385127;385128;385129;385130 385120 12 VPGPMGPNSGPSSR Unmodified 1338.635 0.63503349 901 P0CG12 CHTF8 Chromosome transmission fidelity protein 8 homolog isoform 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 32.463 32.702 2 0.00069093 35495 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 77.64 72.274 44126000 0 0 0 0 2724200 2448900 3134600 2836500 1747400 4074000 6702200 6423100 6440900 2568200 5025800 57607 901 51750 485375;485376;485377;485378;485379;485380;485381;485382;485383;485384;485385 385131;385132;385133;385134;385135;385136;385137;385138;385139;385140;385141 385136 11 VPGPMGPNSGPSSR Oxidation (M) 1354.6299 0.62994811 901 P0CG12 CHTF8 Chromosome transmission fidelity protein 8 homolog isoform 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 22.004 22.23 2 0.00038563 22705 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 66.262 55.111 34625000 0 0 0 0 3379600 0 0 0 6594000 5686800 0 6568400 6773700 5622200 0 57608 901 51750 485386;485387;485388;485389;485390;485391 385142;385143 385143 1163 2 VPGQEETVK Unmodified 985.50803 0.50802529 3701 Q93008 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.532 14.694 2 0.0032294 14428 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 123.72 62.961 232070000 0 0 0 11429000 10466000 21023000 11139000 10409000 10683000 26624000 24993000 24410000 20352000 23854000 36692000 57609 3701 51751 485392;485393;485394;485395;485396;485397;485398;485399;485400;485401;485402;485403 385144;385145;385146;385147;385148;385149 385146 6 VPGSIALPVQTLVSAR Unmodified 1606.9406 0.94064121 1607 P49848 TAF6 Transcription initiation factor TFIID subunit 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 87.785 87.884 2 0.0057914 101684 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.317 32.588 19049000 0 0 0 0 1140300 1980500 1003500 2339500 1205300 2508400 0 2571600 1362600 1577600 3359900 57610 1607 51752 485404;485405;485406;485407;485408;485409;485410;485411;485412;485413 385150 385150 1 VPGTISYESEITSVNSFPEK Unmodified 2183.0634 0.063394703 2970 Q6T4R5 NHS Nance-Horan syndrome protein yes yes 0 0 0 By MS/MS 2 0 1 1 83.668 78.948 2 1.0836E-85 98208 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 155.06 134.68 18133000 0 18133000 0 0 0 0 0 0 0 0 0 0 0 0 0 57611 2970 51753 485414 385151 385151 1 VPGVENSDSPAQR Unmodified 1354.6477 0.64770667 4272 Q9BZL4 PPP1R12C Protein phosphatase 1 regulatory subunit 12C yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 25.934 26.148 2 0.0002293 27826 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 83 71.152 11833000 0 0 0 2201000 0 0 0 0 1460300 0 2755600 0 3279100 2136500 0 57612 4272 51754 485415;485416;485417;485418;485419;485420;485421 385152;385153;385154;385155;385156;385157 385157 6 VPGVTAIELDEDTGTFR Unmodified 1818.9 0.89995819 1645 P51114 FXR1 Fragile X mental retardation syndrome-related protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 2 81.001 81.095 2 6.3061E-14 93775 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 106.01 102.69 27151000 0 0 0 0 3795400 0 3461900 4140500 4368100 0 0 0 3166900 0 8218400 57613 1645 51755 485422;485423;485424;485425;485426;485427;485428;485429 385158;385159;385160;385161;385162;385163;385164 385161 7 VPGVTDCVAEIQK Unmodified 1414.7126 0.71261511 2195 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 1 1 6 2 1 1 1 1 1 1 59.24 57.752 2 0.00067122 65578 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.655 53.893 118580000 0 94819000 0 0 0 0 0 0 0 0 6686100 5920700 4958000 0 6192200 57614 2195 51756 485430;485431;485432;485433;485434;485435;485436;485437 385165;385166;385167;385168;385169;385170;385171;385172 385168 7 VPHLIDHQISSGENTR Unmodified 1801.9071 0.90710925 5050 Q9UPN6 SCAF8 Protein SCAF8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 1 2 2 1 2 2 2 2 2 2 2 41.153 41.396 3;4 3.6311E-05 45802 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 75.018 64.877 689400000 0 0 0 8402300 6478400 62642000 33754000 30472000 63927000 51317000 67911000 107160000 67061000 54545000 135740000 57615 5050 51757 485438;485439;485440;485441;485442;485443;485444;485445;485446;485447;485448;485449;485450;485451;485452;485453;485454;485455;485456;485457;485458 385173;385174;385175;385176;385177;385178;385179;385180;385181;385182 385177 6 VPHSLDLSSPNMANTVNAALK Oxidation (M) 2194.1052 0.10521671 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 67.225 67.448 3 3.5944E-13 77295 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 84.581 68.088 142290000 0 0 0 0 0 27879000 0 7716500 9083600 20232000 15434000 20166000 9780100 10240000 21758000 57616 3119 51758 485459;485460;485461;485462;485463;485464;485465;485466;485467 385183;385184;385185;385186;385187;385188;385189;385190;385191;385192;385193 385183 4739 11 VPHSLDLSSPNMANTVNAALK Unmodified 2178.1103 0.11030209 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 78.213 78.351 3 8.4423E-16 90131 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.859 80.801 29250000 0 0 0 0 0 3731700 0 0 2104500 0 0 0 0 3847400 19567000 57617 3119 51758 485468;485469;485470;485471 385194 385194 1 VPIDGPPIDIGR Unmodified 1247.6874 0.68738664 954 P11717 IGF2R Cation-independent mannose-6-phosphate receptor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.792 74.856 2 0.0071754 86618 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 50.452 32.19 83065000 0 0 0 4269300 6195800 6525500 4424100 5516500 5524500 7644500 8135300 12993000 6934700 5743000 9159000 57618 954 51759 485472;485473;485474;485475;485476;485477;485478;485479;485480;485481;485482;485483 385195;385196;385197;385198;385199;385200;385201;385202;385203;385204;385205;385206 385203 12 VPIDIIVNCDDSK Unmodified 1486.7337 0.73374448 4301 Q9GZR1 SENP6 Sentrin-specific protease 6 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 74.391 74.35 2 0.006753 86179 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 46.796 9.1154 32279000 0 0 0 5011600 4917600 4644500 0 3855400 4108900 0 0 0 0 0 9741000 57619 4301 51760 485484;485485;485486;485487;485488;485489 385207 385207 1 VPILVAQEGESSQQLNDSSVIISALK Unmodified 2724.4545 0.45453974 4441 Q9H7Z7 PTGES2 Prostaglandin E synthase 2;Prostaglandin E synthase 2 truncated form yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 5.4 3.77 2 1 2 2 1 1 1 93.778 91.718 3 4.3093E-19 113479 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.467 78.592 36718000 0 30458000 1302900 0 0 0 0 0 0 3675600 0 0 0 0 1281400 57620 4441 51761 485490;485491;485492;485493;485494 385208;385209;385210 385209 3 VPIPAPNEVLNDRK Unmodified 1560.8624 0.86239089 4293 Q9C0J8 WDR33 pre-mRNA 3' end processing protein WDR33 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67.331 66.589 3 0.0001435 75389 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.26 61.875 149020000 22260000 0 12793000 5402800 5565300 7954900 9581800 5569400 7479400 9949800 9893400 13142000 10066000 13699000 15661000 57621 4293 51762 485495;485496;485497;485498;485499;485500;485501;485502;485503;485504;485505;485506;485507;485508 385211;385212;385213;385214;385215;385216;385217;385218;385219;385220 385212 8 VPITAVIAAK Unmodified 981.62227 0.62226719 1243 P29144 TPP2 Tripeptidyl-peptidase 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.79 64.879 2 0.0028915 73925 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 79.059 41.085 74038000 0 0 0 4211900 2571100 3555700 2363400 3417900 2821500 4702200 7232400 8612200 4703600 8872600 20973000 57622 1243 51763 485509;485510;485511;485512;485513;485514;485515;485516;485517;485518;485519;485520 385221;385222;385223;385224;385225;385226;385227;385228 385228 8 VPITYLELLN Unmodified 1173.6645 0.66452593 5139 Q9Y371 SH3GLB1 Endophilin-B1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 95.553 94.913 2 0.00011319 115085 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.65 100.12 737180000 0 469150000 6323000 3580900 21048000 14786000 16364000 27722000 19261000 37282000 24790000 31768000 21308000 17243000 26553000 57623 5139 51764 485521;485522;485523;485524;485525;485526;485527;485528;485529;485530;485531;485532;485533;485534;485535 385229;385230;385231;385232;385233;385234;385235;385236;385237;385238;385239 385231 7 VPIYDFTTHSR Unmodified 1334.6619 0.66190017 4710 Q9NWZ5 UCKL1 Uridine-cytidine kinase-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 57.563 57.589 3 0.0047345 65747 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 54.023 45.309 122670000 0 0 0 6242200 7147500 17441000 8997300 10646000 11350000 16905000 11905000 0 17779000 14259000 0 57624 4710 51765 485536;485537;485538;485539;485540;485541;485542;485543;485544;485545 385240;385241;385242 385242 3 VPIYFSTGLTEK Unmodified 1353.718 0.71801807 2789 Q5TA45 CPSF3L Integrator complex subunit 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.553 77.611 2 2.194E-05 89689 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 103.26 83.902 80692000 0 0 0 3348100 4522300 7038600 4580600 6378800 6007400 9551000 7137100 7829200 6619900 7360900 10317000 57625 2789 51766 485546;485547;485548;485549;485550;485551;485552;485553;485554;485555;485556;485557 385243;385244;385245;385246;385247;385248;385249;385250;385251;385252;385253 385243 11 VPLAIVNK Unmodified 852.54329 0.54328858 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 49.666 49.929 2 0.01035 55516 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 79.939 56.903 46068000 0 0 0 7190700 0 0 0 0 0 0 0 16448000 0 10892000 11537000 57626 2392 51767 485558;485559;485560;485561;485562;485563 385254;385255;385256;385257;385258 385257 4 VPLALFALNR Unmodified 1112.6706 0.67061436 972 P12955 PEPD Xaa-Pro dipeptidase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 87.654 87.728 2 0.0027748 101398 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.229 69.815 22130000 0 0 0 1624000 0 1538400 0 2362900 0 1526500 2372800 3013700 0 1365100 8326600 57627 972 51768 485564;485565;485566;485567;485568;485569;485570;485571 385259;385260;385261;385262;385263;385264 385260 6 VPLALHPVVGQPFLK Unmodified 1613.9657 0.96573375 4752 Q9NYV4 CDK12 Cyclin-dependent kinase 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 82.482 82.616 3 6.1245E-10 95253 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.495 53.349 68984000 0 0 0 0 0 11643000 0 0 9974100 0 0 0 0 0 47366000 57628 4752 51769 485572;485573;485574;485575;485576 385265;385266;385267;385268;385269;385270;385271;385272 385269 8 VPLAPITDPQQLQLSPLK Unmodified 1957.1248 0.12481317 1301 P31350 RRM2 Ribonucleoside-diphosphate reductase subunit M2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 1 2 2 2 2 2 2 2 2 2 2 2 89.026 89.114 2;3 1.3331E-32 103587 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 131.69 124.65 309830000 0 0 0 2134000 15936000 17686000 12504000 21419000 13800000 32489000 31917000 29489000 13399000 25412000 93648000 57629 1301 51770 485577;485578;485579;485580;485581;485582;485583;485584;485585;485586;485587;485588;485589;485590;485591;485592;485593;485594;485595;485596;485597;485598;485599 385273;385274;385275;385276;385277;385278;385279;385280;385281;385282;385283;385284;385285;385286 385283 14 VPLDPLIGK Unmodified 950.58007 0.58006802 1713 P53384 NUBP1 Cytosolic Fe-S cluster assembly factor NUBP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.272 71.347 2 0.03641 81026 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.7 18.071 325470000 0 0 0 15353000 11577000 38858000 19190000 20198000 10372000 31070000 35881000 36454000 23906000 27283000 55326000 57630 1713 51771 485600;485601;485602;485603;485604;485605;485606;485607;485608;485609;485610;485611 385287 385287 1 VPLEDLSEDPVVGHLGTSTEEGK Unmodified 2407.1755 0.17546435 4849 Q9UBP6 METTL1 tRNA (guanine-N(7)-)-methyltransferase yes yes 0 0 0 By MS/MS 10 0 1 1 78.143 78.408 3 1.9604E-20 90136 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.825 78.116 19758000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19758000 57631 4849 51772 485612 385288 385288 1 VPLEDLSEDPVVGHLGTSTEEGKK Unmodified 2535.2704 0.27042737 4849 Q9UBP6 METTL1 tRNA (guanine-N(7)-)-methyltransferase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 74.375 74.612 4 2.7263E-12 85553 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.704 63.057 43041000 0 0 0 0 0 0 0 0 0 0 9560000 0 0 17445000 16036000 57632 4849 51773 485613;485614;485615 385289;385290 385289 2 VPLENNYLK Unmodified 1088.5866 0.58660996 3453 Q8NG31 CASC5 Protein CASC5 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 52.231 52.568 2 0.023437 59049 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 51.059 24.645 39844000 0 0 0 0 0 6581600 2358600 0 0 3108600 5458800 11415000 3070300 0 7850900 57633 3453 51774 485616;485617;485618;485619;485620;485621;485622 385291;385292 385291 2 VPLEVQEADEAK Unmodified 1326.6667 0.66671078 1210 P26640 VARS Valine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.39 3.71 1 3 2 12 4 2 1 1 1 1 1 1 1 1 1 1 1 1 49.446 48.526 2 4.0159E-15 93863 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 166.69 142.84 3934900000 99610000 3026600000 0 37408000 36349000 87972000 56664000 37035000 30994000 88163000 81742000 90654000 44452000 80311000 136880000 57634 1210 51775 485623;485624;485625;485626;485627;485628;485629;485630;485631;485632;485633;485634;485635;485636;485637;485638;485639;485640 385293;385294;385295;385296;385297;385298;385299;385300;385301;385302;385303;385304;385305;385306;385307;385308;385309;385310;385311;385312;385313;385314;385315;385316 385308 24 VPLFSPNFSEK Unmodified 1263.6499 0.6499385 4086 Q9BQ52 ELAC2 Zinc phosphodiesterase ELAC protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching 5.64 4.01 1 4 1 5 3 2 1 1 1 1 1 1 77.711 76.516 2 4.6815E-09 92213 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 153.05 135.57 844950000 422470000 318120000 63757000 3971700 0 5913800 0 0 4121900 0 11865000 14728000 0 0 0 57635 4086 51776 485641;485642;485643;485644;485645;485646;485647;485648;485649;485650;485651 385317;385318;385319;385320;385321 385318 5 VPLILVGNK Unmodified 951.6117 0.6117025 5170 Q9Y3L5 RAP2C Ras-related protein Rap-2c yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 70.577 70.655 2 0.0052447 80210 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.116 0 22320000 0 0 0 1576100 0 2232000 1702500 2399700 1472000 2815200 0 0 0 2747200 7375500 57636 5170 51777 485652;485653;485654;485655;485656;485657;485658;485659 385322;385323;385324;385325;385326;385327;385328 385325 7 VPLLLHQK Unmodified 946.59639 0.59638679 5045 Q9UNY4 TTF2 Transcription termination factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 42.408 42.534 2 0.014574 46457 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 70.268 32.03 52390000 0 0 0 3637700 3369400 4792500 3422000 4262900 4090400 4740600 6259800 6757700 6337600 4719300 0 57637 5045 51778 485660;485661;485662;485663;485664;485665;485666;485667;485668;485669;485670 385329;385330;385331;385332;385333;385334;385335;385336;385337 385336 9 VPLLSTDTCRR Unmodified 1316.6871 0.68706906 904 P0CW18 PRSS56 Serine protease 56 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 40.916 41.313 3 0.003855 45925 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 48.004 36.791 124690000 0 0 0 0 0 4686300 0 0 0 6388800 18764000 36043000 21393000 23544000 13875000 57638 904 51779 485671;485672;485673;485674;485675;485676;485677 385338;385339;385340;385341;385342 385339 2 VPLPLAASLMSSELAR Unmodified 1653.9124 0.91237755 2147 Q08050 FOXM1 Forkhead box protein M1 yes yes 0 0 0 By MS/MS 10 0 1 1 94.71 94.857 2 0.0103 110027 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.847 31.506 994030 0 0 0 0 0 0 0 0 0 0 0 0 0 0 994030 57639 2147 51780 485678 385343 385343 1 VPLQGFAALEGMNGIQK Oxidation (M) 1787.924 0.92400487 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.52 3.05 3 1 17 1 2 1 1 1 2 1 1 2 2 2 1 2 2 81.45 80.627 2;3 7.3162E-54 96413 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 149.69 138.16 326690000 36230000 33501000 7175100 5014800 7285500 34578000 0 10165000 11211000 32630000 32061000 36132000 10345000 24127000 46238000 57640 3119 51781 485679;485680;485681;485682;485683;485684;485685;485686;485687;485688;485689;485690;485691;485692;485693;485694;485695;485696;485697;485698;485699 385344;385345;385346;385347;385348;385349;385350;385351;385352;385353;385354;385355;385356;385357;385358;385359 385350 4740 15 VPLQGFAALEGMNGIQK Unmodified 1771.9291 0.92909025 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 4.6 3.56 5 2 3 1 4 2 1 1 1 89.594 86.696 2;3 8.3964E-95 109006 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 200.93 167.7 143930000 42619000 85716000 4521800 0 0 2411400 0 0 0 0 0 0 0 1552800 7109700 57641 3119 51781 485700;485701;485702;485703;485704;485705;485706;485707;485708;485709 385360;385361;385362;385363;385364;385365;385366 385365 6 VPLQQNFQDNQFQGK Unmodified 1789.8747 0.87474649 1990 P80188 LCN2 Neutrophil gelatinase-associated lipocalin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 2 1 1 1 1 1 1 1 1 2 1 60.085 60.098 2;3 1.5299E-59 69149 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 176.8 170.83 69734000 0 0 0 22137000 2412100 2900300 3028500 4376400 2964100 5977700 7920200 6743900 8611000 2663000 0 57642 1990 51782 485710;485711;485712;485713;485714;485715;485716;485717;485718;485719;485720;485721;485722 385367;385368;385369;385370;385371;385372;385373;385374;385375;385376;385377;385378;385379;385380 385377 13 VPLQTLHMTSENQEK Unmodified 1753.8669 0.86688392 2914 Q6P158 DHX57 Putative ATP-dependent RNA helicase DHX57 yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 56.888 49.891 3 0.009336 67770 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.216 42.177 29847000 18801000 11046000 0 0 0 0 0 0 0 0 0 0 0 0 0 57643 2914 51783 485723;485724 385381 385381 0 VPLSAYER Unmodified 933.49198 0.4919813 5066 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.701 37.882 2 0.0093409 40647 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 83.206 32.24 469670000 0 0 0 20826000 34263000 25140000 36941000 30539000 28415000 38839000 38239000 56397000 51349000 57762000 50962000 57644 5066 51784 485725;485726;485727;485728;485729;485730;485731;485732;485733;485734;485735;485736 385382;385383;385384;385385 385384 4 VPLTNAVLAVK Unmodified 1123.6965 0.69649476 2993 Q6XZF7 DNMBP Dynamin-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73.751 72.888 2 0.0022931 84657 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 68.371 37.142 146620000 12413000 14766000 0 6169600 5720900 13872000 6614300 6273400 9451200 13093000 12945000 14021000 8735500 10491000 12052000 57645 2993 51785 485737;485738;485739;485740;485741;485742;485743;485744;485745;485746;485747;485748;485749;485750 385386;385387;385388;385389;385390;385391;385392;385393;385394;385395;385396;385397;385398 385397 13 VPLVAPEDLR Unmodified 1107.6288 0.62880913 208 O14744 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.264 68.343 2 0.0048243 78674 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 71.425 60.56 173010000 0 0 0 8707700 6603900 13822000 9966200 6806900 7499100 11202000 21110000 22525000 14013000 17879000 32871000 57646 208 51786 485751;485752;485753;485754;485755;485756;485757;485758;485759;485760;485761;485762 385399;385400;385401;385402;385403;385404;385405;385406;385407;385408;385409;385410 385407 12 VPLVAPEDLRDDIIENAPTTHTEEYSGEEK Unmodified 3366.6103 0.61032469 208 O14744 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed yes yes 0 0 1 By MS/MS 10 0 1 1 81.962 82.165 4 1.9065E-07 94768 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 34.558 32.276 10574000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10574000 57647 208 51787 485763 385411 385411 1 VPLVVRLEGTNVQEAQK Unmodified 1879.0527 0.052710858 3875 Q96I99 SUCLG2 Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial yes yes 0 0 1 By MS/MS 2 0 1 1 78.3 70.17 3 0.00056639 92316 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.623 40.143 10805000 10805000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57648 3875 51788 485764 385412 385412 1 VPMASCDFSIR Unmodified 1281.5846 0.58457783 770 P04062 GBA Glucosylceramidase yes yes 0 0 0 By MS/MS 10 0 1 1 66.554 65.866 2 0.039921 76116 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 43.512 31.665 5219800 0 0 0 5219800 0 0 0 0 0 0 0 0 0 0 0 57649 770 51789 485765 385413 385413 1 VPMLVPVPVSEPVPEPEPEPEPEPVK Oxidation (M) 2832.4507 0.45069992 1003 P14635 CCNB1 G2/mitotic-specific cyclin-B1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 88.086 87.287 3 1.5873E-18 107726 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.412 73.763 114140000 0 50853000 0 0 0 8834000 0 6310900 0 12051000 8136100 10154000 5379000 0 12419000 57650 1003 51790 485766;485767;485768;485769;485770;485771;485772;485773;485774 385414;385415;385416;385417;385418;385419;385420;385421;385422;385423;385424;385425 385417 1369 12 VPMLVPVPVSEPVPEPEPEPEPEPVK Unmodified 2816.4558 0.45578529 1003 P14635 CCNB1 G2/mitotic-specific cyclin-B1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 94.561 90.509 3 1.5336E-12 112408 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.251 71.153 84190000 0 84190000 0 0 0 0 0 0 0 0 0 0 0 0 0 57651 1003 51790 485775;485776 385426;385427 385426 2 VPNACLFTINK Unmodified 1275.6645 0.66454271 1687 P52435 POLR2J DNA-directed RNA polymerase II subunit RPB11-a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 1 1 1 1 1 1 1 1 1 1 1 1 72.951 72.067 2 0.00064097 92745 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 111.73 76.782 90235000 25151000 4948500 0 3166000 0 4482400 3318100 0 3287300 5435700 7776000 7196300 6823800 5681200 12969000 57652 1687 51791 485777;485778;485779;485780;485781;485782;485783;485784;485785;485786;485787;485788 385428;385429;385430;385431;385432;385433 385431 5 VPNGGGGGGGLPISTVR Unmodified 1493.795 0.79503961 956 P11802 CDK4 Cyclin-dependent kinase 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 57.622 57.981 2 0.00084253 64962 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.716 57.502 14440000 0 0 0 0 0 0 5451000 0 0 0 0 0 0 0 8989400 57653 956 51792 485789;485790;485791;485792 385434;385435;385436;385437 385435 4 VPNGIEPMLK Unmodified 1096.5951 0.59506616 3704 Q93034 CUL5 Cullin-5 yes yes 0 0 0 By MS/MS 2 0 1 1 68.796 62.897 2 0.0032886 80409 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.342 60.724 67603000 0 67603000 0 0 0 0 0 0 0 0 0 0 0 0 0 57654 3704 51793 485793 385438;385439 385439 2 VPNGSNPYTLK Unmodified 1188.6139 0.61388734 3567 Q8WVV9 HNRNPLL Heterogeneous nuclear ribonucleoprotein L-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 38.515 38.767 2 0.01838 42989 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 52.278 29.538 51637000 0 0 0 0 3395300 4429000 4538200 3936300 0 6198800 6630400 5460300 4864100 4151700 8033200 57655 3567 51794 485794;485795;485796;485797;485798;485799;485800;485801;485802;485803 385440;385441;385442;385443;385444 385443 5 VPNLPSFK Unmodified 900.5069 0.50690308 3628 Q92572 AP3S1 AP-3 complex subunit sigma-1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.737 64.827 2 0.017183 74712 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 66.073 42.764 232290000 0 0 0 12528000 10668000 13256000 15689000 15458000 12777000 20198000 24236000 26873000 22649000 22323000 35636000 57656 3628 51795 485804;485805;485806;485807;485808;485809;485810;485811;485812;485813;485814;485815 385445;385446;385447 385447 2 VPNLSQFV Unmodified 902.48617 0.48616764 1805 P59780 AP3S2 AP-3 complex subunit sigma-2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 88.6 84.946 2 0.022353 105092 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.614 69.033 101790000 0 100750000 1038100 0 0 0 0 0 0 0 0 0 0 0 0 57657 1805 51796 485816;485817 385448 385448 1 VPNSNPPEYEFFWGLR Unmodified 1950.9264 0.92644771 5031 Q9UNF1 MAGED2 Melanoma-associated antigen D2 yes yes 0 0 0 By MS/MS 10 0 1 1 92.771 92.909 2 0.0033081 107654 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.077 34.467 2823500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2823500 57658 5031 51797 485818 385449 385449 1 VPNVPQEALDK Unmodified 1208.6401 0.6401021 16 A3KMH1 VWA8 von Willebrand factor A domain-containing protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 49.468 49.498 2 0.015227 55664 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 49.466 30.195 51718000 0 0 0 0 10563000 0 10180000 0 10558000 0 20417000 0 0 0 0 57659 16 51798 485819;485820;485821;485822 385450;385451 385450 2 VPPAINQFTQALDR Unmodified 1568.8311 0.83109076 1900 P62424 RPL7A 60S ribosomal protein L7a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 83.626 83.689 2;3 1.265E-20 96534 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 143.97 129.29 433880000 0 0 0 5245700 14890000 25400000 19992000 27631000 23196000 55475000 42866000 59816000 33186000 41641000 84539000 57660 1900 51799 485823;485824;485825;485826;485827;485828;485829;485830;485831;485832;485833;485834;485835;485836;485837;485838;485839;485840;485841;485842;485843;485844;485845;485846 385452;385453;385454;385455;385456;385457;385458;385459;385460;385461;385462;385463;385464;385465;385466;385467;385468;385469;385470;385471;385472 385461 19 VPPAPVPCPPPSPGPSAVPSSPK Unmodified 2218.1456 0.14562496 694 O95817 BAG3 BAG family molecular chaperone regulator 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.026 71.098 3 6.641E-11 81584 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 70.453 47.353 93777000 0 0 0 3706200 4469200 5369800 5543800 6893400 4378700 10324000 12116000 11392000 8664700 8086300 12833000 57661 694 51800 485847;485848;485849;485850;485851;485852;485853;485854;485855;485856;485857;485858 385473;385474;385475;385476;385477;385478;385479;385480;385481;385482;385483;385484;385485 385473 13 VPPAVIIPPAAPLSGR Unmodified 1553.9293 0.92934824 4393 Q9H4A3 WNK1 Serine/threonine-protein kinase WNK1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 1 1 2 2 1 1 1 83.329 83.408 2;3 7.6307E-05 96757 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 96.229 87.331 124910000 0 0 0 3708400 5846900 5813700 5081700 5989600 7372800 9570000 24411000 24613000 9801200 9338700 13359000 57662 4393 51801 485859;485860;485861;485862;485863;485864;485865;485866;485867;485868;485869;485870;485871;485872 385486;385487;385488;385489;385490;385491;385492;385493;385494;385495;385496 385492 9 VPPAVIIPPAAPLSGRR Unmodified 1710.0305 0.030459273 4393 Q9H4A3 WNK1 Serine/threonine-protein kinase WNK1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 77.521 77.612 3 0.00030358 89557 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 52.569 46.406 94287000 0 0 0 4678300 0 8173900 4914300 8208700 6472100 8690200 8431700 15387000 9643200 7683800 12004000 57663 4393 51802 485873;485874;485875;485876;485877;485878;485879;485880;485881;485882;485883 385497;385498;385499;385500;385501;385502;385503;385504;385505;385506;385507;385508;385509;385510 385508 14 VPPEFDFSAHK Unmodified 1272.6139 0.61388734 2831 Q5VZE5 NAA35 N-alpha-acetyltransferase 35, NatC auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 2 2 1 1 59.436 58.576 2;3 1.8004E-05 66604 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 119.27 108.52 500690000 0 39696000 31532000 12880000 14421000 17457000 4975900 17281000 5636000 84479000 118440000 147040000 0 0 6852800 57664 2831 51803 485884;485885;485886;485887;485888;485889;485890;485891;485892;485893;485894;485895;485896;485897;485898 385511;385512;385513;385514;385515;385516;385517;385518;385519;385520;385521;385522;385523;385524;385525 385513 13 VPPELNNISK Unmodified 1109.6081 0.60807369 2786 Q5T8P6 RBM26 RNA-binding protein 26 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 2 1 1 1 1 1 1 1 1 1 45.882 46.374 2 0.0090212 52207 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 90.15 51.359 92469000 0 0 0 0 0 0 0 0 0 0 0 0 0 36990000 55479000 57665 2786 51804 485899;485900;485901;485902;485903;485904;485905;485906;485907;485908;485909;485910 385526;385527;385528;385529;385530;385531;385532;385533;385534;385535;385536;385537 385530 12 VPPGLPSSVYPPSSGEDYGRDATAYPSAK Unmodified 2964.4141 0.41413149 1028 P15923 TCF3 Transcription factor E2-alpha yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 75.236 75.347 3 7.2852E-22 86515 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.447 59.943 95027000 0 0 0 0 4705800 3799800 7943500 9416200 7329800 10780000 10192000 12415000 6051100 10158000 12236000 57666 1028 51805 485911;485912;485913;485914;485915;485916;485917;485918;485919;485920;485921 385538;385539;385540;385541;385542;385543;385544;385545;385546;385547;385548;385549 385541 12 VPPGYHPLDVEK Unmodified 1349.698 0.69795133 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.92 3.89 5 8 2 1 2 1 1 1 1 2 1 1 46.395 44.097 2;3 0.0052409 61596 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.162 53.537 187260000 61579000 35638000 30353000 8343100 4488100 9907500 5856900 14411000 6122200 10564000 0 0 0 0 0 57667 2501 51806 485922;485923;485924;485925;485926;485927;485928;485929;485930;485931;485932;485933;485934 385550;385551;385552;385553;385554;385555;385556;385557 385554 7 VPPIKPNAGEESVMNLDK Unmodified 1936.9928 0.99281272 1293 P31040 SDHA Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes yes 0 0 1 By MS/MS 2 0 1 1 73.179 67.634 3 0.025011 85299 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 30.428 23.654 45450000 0 45450000 0 0 0 0 0 0 0 0 0 0 0 0 0 57668 1293 51807 485935 385558 385558 1 VPPIKPNAGEESVMNLDK Oxidation (M) 1952.9877 0.98772734 1293 P31040 SDHA Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes yes 0 1 1 By MS/MS 2 0 1 1 58.377 54.551 3 0.001118 68049 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 53.779 45.916 12302000 0 0 12302000 0 0 0 0 0 0 0 0 0 0 0 0 57669 1293 51807 485936 385559 385559 1902 1 VPPLQPMGPTCPTPAPVPPPEAPSPFR Oxidation (M) 2849.4244 0.42444236 3296 Q8IZL8 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 2 1 1 1 84.279 84.405 3 3.8048E-24 98056 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 68.895 63.293 49371000 0 0 0 0 0 0 0 0 0 0 0 18527000 9299700 10012000 11533000 57670 3296 51808 485937;485938;485939;485940;485941;485942 385560;385561;385562;385563;385564;385565 385564 4895 5 VPPNGLVVYCGTIVTEEGK Unmodified 2031.0347 0.034677532 1902 P62495 ETF1 Eukaryotic peptide chain release factor subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.42 3.66 3 1 8 2 2 1 1 1 1 1 1 1 1 81.05 79.126 2;3 1.9071E-40 99531 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 165.64 140.17 382370000 106800000 243670000 0 0 0 2456500 0 1852100 1967200 6327700 5499300 4240800 0 3143300 6412100 57671 1902 51809 485943;485944;485945;485946;485947;485948;485949;485950;485951;485952;485953;485954 385566;385567;385568;385569;385570;385571;385572;385573;385574;385575;385576 385573 11 VPPPLPDPSSICMVDPEMLPPK Unmodified 2415.1888 0.18881169 2845 Q66K74 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain yes yes 0 0 0 By MS/MS 2 0 1 1 96.423 91.602 3 3.9458E-11 113339 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.36 73.969 46806000 0 46806000 0 0 0 0 0 0 0 0 0 0 0 0 0 57672 2845 51810 485955 385577 385577 1 VPPPPETPMPPPLPPTPDQVIVR Oxidation (M) 2486.3243 0.32431761 2539 Q15459 SF3A1 Splicing factor 3A subunit 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 84.999 84.971 3 1.3618E-05 98356 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 45.784 42.686 11468000 0 0 0 0 6223900 0 5244100 0 0 0 0 0 0 0 0 57673 2539 51811 485956;485957;485958 385578;385579;385580 385578 4178 3 VPPPPETPMPPPLPPTPDQVIVRK Oxidation (M) 2614.4193 0.41928063 2539 Q15459 SF3A1 Splicing factor 3A subunit 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 3 1 80.268 80.348 3;4 1.2043E-15 92324 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.733 73.577 161230000 0 0 0 0 7720300 16486000 0 0 0 23043000 20483000 26185000 12189000 31477000 23644000 57674 2539 51812 485959;485960;485961;485962;485963;485964;485965;485966;485967;485968 385581;385582;385583;385584;385585;385586;385587;385588;385589;385590;385591;385592;385593;385594;385595 385586 4178 15 VPPPPETPMPPPLPPTPDQVIVRK Unmodified 2598.4244 0.42436601 2539 Q15459 SF3A1 Splicing factor 3A subunit 1 yes yes 0 0 1 By matching By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 83.102 83.187 3;4 8.4987E-07 95941 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 48.053 41.101 27073000 0 0 0 0 1527300 0 0 5615800 3433800 4346800 0 0 0 0 12149000 57675 2539 51812 485969;485970;485971;485972;485973 385596;385597;385598 385598 3 VPPPPPIAR Unmodified 942.56509 0.56508666 851 P07910 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.027 43.202 2 0.0031512 48724 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 90.986 57.435 1199100000 0 0 0 59927000 64123000 70325000 70657000 71019000 59106000 100270000 104060000 146680000 147640000 114070000 191220000 57676 851 51813 485974;485975;485976;485977;485978;485979;485980;485981;485982;485983;485984;485985 385599;385600;385601;385602;385603;385604;385605;385606;385607;385608;385609;385610;385611;385612;385613;385614;385615;385616;385617;385618;385619;385620;385621;385622;385623;385624;385625;385626;385627 385614 29 VPPPWLIAMQR Oxidation (M) 1322.7169 0.71691263 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.452 79.51 2 0.00021893 91887 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 96.253 82.135 441290000 0 0 0 22330000 28428000 36013000 41866000 41715000 32443000 37497000 40246000 55402000 29219000 29459000 46673000 57677 2290 51814 485986;485987;485988;485989;485990;485991;485992;485993;485994;485995;485996;485997 385628;385629;385630;385631;385632;385633;385634;385635;385636;385637;385638;385639;385640;385641;385642;385643 385643 3746 16 VPPPWLIAMQR Unmodified 1306.722 0.72199801 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 87.862 87.932 2 0.00041741 101585 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.011 75.181 106080000 0 0 0 2359400 3104500 7936100 4191300 10480000 3888600 8695100 9124100 9964800 4604400 7596900 34139000 57678 2290 51814 485998;485999;486000;486001;486002;486003;486004;486005;486006;486007;486008;486009 385644;385645;385646;385647;385648;385649;385650;385651;385652;385653;385654 385647 11 VPPSPELVK Unmodified 964.55933 0.55933258 3663 Q92797 SYMPK Symplekin yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 42.901 43.024 2 0.020914 48941 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 52.716 32.434 105970000 0 0 0 8036200 6322200 10057000 6808300 7936400 6132200 10045000 14835000 0 11808000 11231000 12762000 57679 3663 51815 486010;486011;486012;486013;486014;486015;486016;486017;486018;486019;486020 385655;385656;385657;385658;385659;385660 385659 6 VPPSTQVK Unmodified 854.48617 0.48616764 4871 Q9UEE9 CFDP1 Craniofacial development protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 14.534 10.853 2 0.018072 14849 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.296 47.794 152060000 13747000 138320000 0 0 0 0 0 0 0 0 0 0 0 0 0 57680 4871 51816 486021;486022 385661 385661 1 VPPTVQKPTTVNVPTTEVSPTSQK Unmodified 2534.3592 0.35918279 859 P08174 CD55 Complement decay-accelerating factor yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.62 60.725 3 5.5477E-35 68672 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.302 69.54 246710000 0 0 0 13011000 21254000 9916800 23524000 21620000 10361000 22643000 27073000 38054000 21290000 18742000 19222000 57681 859 51817 486023;486024;486025;486026;486027;486028;486029;486030;486031;486032;486033;486034 385662;385663;385664;385665;385666;385667;385668;385669;385670;385671;385672;385673;385674 385665 13 VPPVPDYVAHPER Unmodified 1474.7569 0.75686319 5250 Q9Y5U2 TSSC4 Protein TSSC4 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 55.155 55.361 3 0.0038731 62785 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 36.292 30.211 66525000 0 0 0 0 3349600 5444400 5339900 5438700 3980800 0 8514700 11233000 5842400 6670500 10711000 57682 5250 51818 486035;486036;486037;486038;486039;486040;486041;486042;486043;486044 385675;385676;385677;385678 385675 3 VPQAEGPPK Unmodified 921.49198 0.4919813 2381 Q14160 SCRIB Protein scribble homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.022 16.198 2 0.0030483 15780 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 91.318 71.472 131880000 0 0 0 6113000 5191500 7278400 6593000 6688000 6112200 8927300 14142000 22112000 14823000 14713000 19188000 57683 2381 51819 486045;486046;486047;486048;486049;486050;486051;486052;486053;486054;486055;486056 385679;385680;385681;385682;385683;385684;385685;385686 385683 6 VPQDGDFDFLK Unmodified 1279.6085 0.60846762 2250 Q13188 STK3 Serine/threonine-protein kinase 3;Serine/threonine-protein kinase 3 36kDa subunit;Serine/threonine-protein kinase 3 20kDa subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.57 3.96 3 4 1 1 1 1 1 1 1 79.506 77.357 2 0.0012018 90490 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 74.376 63.155 51911000 19071000 0 6004100 6021500 0 0 9118600 0 0 0 11696000 0 0 0 0 57684 2250 51820 486057;486058;486059;486060;486061;486062;486063 385687;385688;385689;385690;385691;385692;385693 385693 6 VPQDVLQK Unmodified 925.52328 0.52328142 1610 P49903 SEPHS1 Selenide, water dikinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 31.762 30.584 2 0.0062495 33023 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 102.46 68.461 1244500000 29498000 1088700000 6818300 0 3027000 13474000 6103400 0 4766500 8223300 14187000 16526000 7974000 14159000 31022000 57685 1610 51821 486064;486065;486066;486067;486068;486069;486070;486071;486072;486073;486074;486075;486076;486077 385694;385695;385696;385697;385698;385699;385700;385701;385702;385703;385704;385705;385706;385707 385706 12 VPQFSFSR Unmodified 966.49232 0.49231565 1224 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 61.039 61.224 2 0.0081546 69236 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.181 66.482 98960000 0 0 0 0 6232500 9502100 0 13575000 0 0 11702000 11259000 10895000 13837000 21958000 57686 1224 51822 486078;486079;486080;486081;486082;486083;486084;486085 385708;385709;385710;385711 385709 4 VPQIEVETHK Unmodified 1178.6295 0.62953741 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.88 3.47 7 2 24 3 4 2 2 2 2 2 2 2 2 2 2 2 2 2 37.518 36.429 2;3 4.1464E-07 38936 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 120.06 88.568 2884000000 131990000 1152400000 409480000 72235000 76027000 114610000 94832000 94174000 72562000 100190000 88848000 144740000 98759000 103710000 129490000 57687 2392 51823 486086;486087;486088;486089;486090;486091;486092;486093;486094;486095;486096;486097;486098;486099;486100;486101;486102;486103;486104;486105;486106;486107;486108;486109;486110;486111;486112;486113;486114;486115;486116;486117;486118 385712;385713;385714;385715;385716;385717;385718;385719;385720;385721;385722;385723;385724;385725;385726;385727;385728;385729;385730;385731;385732;385733;385734;385735;385736;385737;385738;385739;385740;385741;385742;385743 385718 11 VPQLEIVPNSAEER Unmodified 1579.8206 0.82058566 59 CON__P02662 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 70.963 70.991 2 1.0405E-07 81905 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 99.215 95.198 + 53764000 0 0 0 6892100 10727000 15263000 5797600 2573600 0 1758500 6606100 0 0 1712100 2433600 57688 59 51824 486119;486120;486121;486122;486123;486124;486125;486126;486127;486128 385744;385745;385746;385747;385748;385749;385750 385750 7 VPQNQNGK Unmodified 883.45118 0.45117911 1085 P19338 NCL Nucleolin yes yes 0 0 0 By MS/MS 1 0 1 1 106.93 112.19 2 0.010282 93004 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 113.08 83.934 17400000 17400000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57689 1085 51825 486129 385751 385751 1 VPQPERLDLVYTALK Unmodified 1740.9774 0.97742065 3008 Q6ZS17 FAM65A Protein FAM65A yes yes 0 0 1 By matching By MS/MS By matching By matching By MS/MS 10 0 5 1 1 1 1 1 80.438 80.6 3 0.040746 92874 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 26.929 16.141 22117000 0 0 0 0 0 0 0 1737600 2509800 6748400 0 0 0 2374700 8745900 57690 3008 51826 486130;486131;486132;486133;486134 385752 385752 1 VPQRAGEVERDLDK Unmodified 1610.8376 0.8376327 2501 Q15149 PLEC Plectin yes yes 0 0 2 By MS/MS 2 0 1 1 38.31 31.748 3 0.012555 44072 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.527 30.114 22410000 22410000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57691 2501 51827 486135 385753 385753 1 VPQVRVLDFQK Unmodified 1327.7612 0.76122028 892 P09661 SNRPA1 U2 small nuclear ribonucleoprotein A' yes yes 0 0 1 By MS/MS 2 0 1 1 76.695 68.565 3 0.0061384 90366 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.439 42.767 29200000 29200000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57692 892 51828 486136 385754 385754 1 VPQVSTPTLVEVSR Unmodified 1510.8355 0.83550744 64;65 CON__P02769;CON__P02768-1;P02768 ALB Serum albumin no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 72.552 72.621 2;3 3.6531E-72 83190 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 225.15 215.19 + 4606500000 0 0 0 578200000 669870000 294040000 321360000 240600000 274920000 610410000 476600000 354450000 226620000 252900000 306550000 57693 65;64 51829 486137;486138;486139;486140;486141;486142;486143;486144;486145;486146;486147;486148;486149;486150;486151;486152;486153;486154;486155;486156;486157;486158;486159;486160 385755;385756;385757;385758;385759;385760;385761;385762;385763;385764;385765;385766;385767;385768;385769;385770;385771;385772;385773;385774;385775;385776;385777;385778;385779;385780;385781;385782;385783;385784;385785;385786;385787 385765 26 VPRENMEAISPLK Unmodified 1482.7864 0.78644876 716 O96019 ACTL6A Actin-like protein 6A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 54.966 55.097 3 0.0021564 63579 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 54.898 42.271 332140000 0 0 0 15593000 13648000 22808000 22181000 20260000 21386000 33163000 40349000 38360000 22375000 28417000 53602000 57694 716 51830 486161;486162;486163;486164;486165;486166;486167;486168;486169;486170;486171;486172 385788;385789;385790;385791;385792;385793;385794;385795;385796;385797;385798;385799;385800;385801 385800 12 VPRENMEAISPLK Oxidation (M) 1498.7814 0.78136338 716 O96019 ACTL6A Actin-like protein 6A yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 39.445 39.588 3 0.00070821 44000 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 60.401 48.132 91317000 0 0 0 0 16178000 0 0 12845000 17148000 22882000 0 0 0 0 22266000 57695 716 51830 486173;486174;486175;486176;486177 385802;385803;385804;385805;385806 385805 856 2 VPRLPATAAEPEAAVISNGEH Unmodified 2128.0913 0.091281208 2057 Q01581 HMGCS1 Hydroxymethylglutaryl-CoA synthase, cytoplasmic yes yes 0 0 1 By MS/MS 2 0 1 1 77.264 69.133 3 0.0022858 91027 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 29.807 20.748 17641000 17641000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57696 2057 51831 486178 385807 385807 1 VPRNPELPNAAQAQK Unmodified 1631.8744 0.87435256 389 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37.435 36.847 3 0.00034994 50505 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.98 48.447 311760000 114190000 0 15471000 10714000 7440500 15798000 13785000 12052000 12871000 18339000 16510000 22012000 19924000 11665000 20986000 57697 389 51832 486179;486180;486181;486182;486183;486184;486185;486186;486187;486188;486189;486190;486191;486192 385808;385809;385810;385811;385812;385813;385814;385815;385816;385817;385818;385819;385820;385821;385822;385823;385824;385825;385826 385817 19 VPRPAFVHYDK Unmodified 1327.7037 0.70370541 3296 Q8IZL8 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 yes yes 0 0 1 By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 40.594 40.965 3 0.010186 44919 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 35.523 23.99 52996000 0 0 0 0 0 0 5444900 0 3851900 5230100 4857700 13016000 0 6154100 14441000 57698 3296 51833 486193;486194;486195;486196;486197;486198;486199 385827;385828 385828 2 VPRPPPLYSHR Unmodified 1317.7306 0.73058886 3915 Q96L91 EP400 E1A-binding protein p400 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 37.531 37.611 3 0.0029966 40614 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 61.435 45.515 35484000 0 0 0 2648400 2523200 6016400 2939700 0 3942900 0 0 6964800 5996000 4452500 0 57699 3915 51834 486200;486201;486202;486203;486204;486205;486206;486207 385829 385829 1 VPRSQEEPGK Unmodified 1125.5778 0.57783619 2019;2051 P85037;Q01167 FOXK1;FOXK2 Forkhead box protein K1;Forkhead box protein K2 no no 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 7.2088 4.3425 2 0.025818 6360 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 118.5 55.949 68958000 17838000 0 51120000 0 0 0 0 0 0 0 0 0 0 0 0 57700 2019;2051 51835 486208;486209 385830 385830 0 VPSALAPASQEPSPAASAEADGK Unmodified 2150.0491 0.049141622 154 O00429 DNM1L Dynamin-1-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 2 2 24 4 2 2 2 2 2 2 2 2 2 2 2 2 55.712 55.06 2;3 7.0775E-108 68176 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 193.64 186.28 436490000 0 116940000 0 17793000 14414000 29203000 22718000 16425000 14909000 31436000 36904000 40305000 26773000 21881000 46784000 57701 154 51836 486210;486211;486212;486213;486214;486215;486216;486217;486218;486219;486220;486221;486222;486223;486224;486225;486226;486227;486228;486229;486230;486231;486232;486233;486234;486235;486236;486237 385831;385832;385833;385834;385835;385836;385837;385838;385839;385840;385841;385842;385843;385844;385845;385846;385847 385836 16 VPSAPAPSLAYGAPAAPLSR Unmodified 1892.0156 0.01559707 3968 Q96RK0 CIC Protein capicua homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 77.337 77.289 2 3.4366E-28 89063 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 128.9 115.7 26979000 0 0 0 4162300 4067800 0 8630900 5373000 0 0 4744700 0 0 0 0 57702 3968 51837 486238;486239;486240;486241;486242;486243 385848;385849;385850;385851;385852;385853 385848 6 VPSDSAITYR Unmodified 1107.556 0.55603811 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.593 37.777 2 0.0014693 41426 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 90.906 58.551 108700000 0 0 0 6772800 6276200 8550900 8926400 7817600 0 9882700 9445000 10527000 21063000 6939700 12501000 57703 5262 51838 486244;486245;486246;486247;486248;486249;486250;486251;486252;486253;486254;486255 385854;385855;385856;385857;385858;385859;385860;385861;385862 385861 7 VPSEASFSDVHLEEGESNSLTK Unmodified 2361.0972 0.097214027 3890 Q96JB2 COG3 Conserved oligomeric Golgi complex subunit 3 yes yes 0 0 0 By MS/MS 3 0 1 1 73.644 69.697 3 0.012683 84318 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 25.619 21.092 3716600 0 3716600 0 0 0 0 0 0 0 0 0 0 0 0 0 57704 3890 51839 486256 385863 385863 1 VPSENVLGEVGSGFK Unmodified 1517.7726 0.77257283 1591 P49748 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.331 77.389 2 1.7569E-19 89386 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 110.92 75.212 202860000 0 0 0 8641700 9509500 15828000 9058400 19660000 8664100 19195000 28431000 21383000 13907000 18060000 30518000 57705 1591 51840 486257;486258;486259;486260;486261;486262;486263;486264;486265;486266;486267;486268 385864;385865;385866;385867;385868;385869;385870;385871;385872 385872 6 VPSGIFDVNSRK Unmodified 1317.7041 0.70409934 2830 Q5VZ89 DENND4C DENN domain-containing protein 4C yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 52.219 52.438 3 0.0012437 58022 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.227 42.016 203380000 0 0 0 0 12618000 17175000 16309000 19203000 13506000 17942000 17385000 17192000 25884000 20164000 25998000 57706 2830 51841 486269;486270;486271;486272;486273;486274;486275;486276;486277;486278;486279 385873;385874;385875;385876;385877;385878;385879 385874 5 VPSGQNADVQK Unmodified 1141.5728 0.57275081 4310 Q9GZZ1 NAA50 N-alpha-acetyltransferase 50 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.45 3.12 1 1 2 16 2 2 1 2 1 2 2 3 1 1 1 1 1 17.223 17.028 2 8.6251E-28 10713 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 173.37 112.46 27221000000 33480000 57073000 0 1869100000 2845300000 0 2084100000 2456400000 2574700000 3606100000 2856200000 8750400000 17676000 23380000 47195000 57707 4310 51842 486280;486281;486282;486283;486284;486285;486286;486287;486288;486289;486290;486291;486292;486293;486294;486295;486296;486297;486298;486299 385880;385881;385882;385883;385884;385885;385886;385887;385888;385889;385890;385891;385892;385893;385894;385895;385896;385897;385898;385899;385900 385880 19 VPSGQNADVQKTDN Unmodified 1471.6903 0.69029976 4310 Q9GZZ1 NAA50 N-alpha-acetyltransferase 50 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 13.788 13.904 2 5.9797E-71 13000 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 214 187.62 359500000 0 0 0 30409000 49941000 3499100 37212000 15250000 3561700 33461000 40609000 145550000 0 0 0 57708 4310 51843 486300;486301;486302;486303;486304;486305;486306;486307;486308 385901;385902 385902 2 VPSISTETEEEEVK Unmodified 1575.7516 0.75156262 4822 Q9P2N5 RBM27 RNA-binding protein 27 yes yes 0 0 0 By MS/MS 10 0 1 1 49.513 49.578 2 0.0047008 56112 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 80.834 65.263 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57709 4822 51844 486309 385903 385903 1 VPSLTTVPQTQGQTTAQK Unmodified 1883.9953 0.99525556 4199 Q9BW19 KIFC1 Kinesin-like protein KIFC1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 21 2 2 2 2 2 1 1 2 1 2 2 2 52.042 52.16 2;3 1.4926E-37 58645 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 160.18 146.98 271100000 0 0 0 19654000 20379000 26465000 22525000 20461000 8532100 11620000 39363000 17005000 23208000 22136000 39749000 57710 4199 51845 486310;486311;486312;486313;486314;486315;486316;486317;486318;486319;486320;486321;486322;486323;486324;486325;486326;486327;486328;486329;486330 385904;385905;385906;385907;385908;385909;385910;385911;385912;385913;385914;385915;385916;385917 385908 13 VPSLVGSFIR Unmodified 1073.6233 0.62332982 1984 P78417 GSTO1 Glutathione S-transferase omega-1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 82.591 82.681 2 0.0014227 95170 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 106.6 69.898 178530000 0 0 0 3681700 0 4876700 3198500 3330100 2235000 4594800 16413000 15692000 4689500 0 119820000 57711 1984 51846 486331;486332;486333;486334;486335;486336;486337;486338;486339;486340;486341 385918;385919;385920;385921;385922;385923 385919 6 VPSPLEGSEGDGDTD Unmodified 1473.6107 0.61071204 5258 Q9Y606 PUS1 tRNA pseudouridine synthase A, mitochondrial yes yes 0 0 0 By MS/MS 1 0 1 1 102.01 102.9 2 0.018476 94065 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 60.518 53.312 2561800 0 2561800 0 0 0 0 0 0 0 0 0 0 0 0 0 57712 5258 51847 486342 385924 385924 1 VPSPPDEHQEAENAVSSGNR Unmodified 2118.9566 0.95663822 4233 Q9BXS6 NUSAP1 Nucleolar and spindle-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 38.152 38.126 3 0.0079832 41330 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 29.729 20.445 31571000 0 0 0 5275200 5266900 6978400 5962200 0 0 0 0 0 0 0 8087900 57713 4233 51848 486343;486344;486345;486346;486347 385925;385926 385925 2 VPSPPDEHQEAENAVSSGNRDSK Unmodified 2449.1106 0.11057268 4233 Q9BXS6 NUSAP1 Nucleolar and spindle-associated protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 34.806 34.667 4 0.0002282 37334 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 38.26 35.251 135740000 0 0 18611000 0 5691500 13990000 4701800 5573900 9086200 13455000 23643000 0 19231000 7818100 13944000 57714 4233 51849 486348;486349;486350;486351;486352;486353;486354;486355;486356;486357;486358 385927;385928;385929;385930;385931;385932;385933;385934;385935;385936 385935 9 VPSREIDK Unmodified 942.51345 0.51344502 2534 Q15428 SF3A2 Splicing factor 3A subunit 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 12.229 9.0485 2 0.026333 11771 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 120.46 66.3 442240000 258940000 70437000 112860000 0 0 0 0 0 0 0 0 0 0 0 0 57715 2534 51850 486359;486360;486361 385937 385937 0 VPSSSSVDSVPRENHESEK Unmodified 2068.9661 0.96614027 4364 Q9H2F5 EPC1 Enhancer of polycomb homolog 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 24.338 23.865 3 0.0016012 24945 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 39.863 30.114 12340000 0 0 5734300 0 0 0 0 0 1551100 0 0 2096900 2957700 0 0 57716 4364 51851 486362;486363;486364;486365 385938;385939;385940;385941 385940 4 VPSSTVEYLK Unmodified 1121.5968 0.5968403 4432 Q9H7C9 AAMDC Mth938 domain-containing protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 53.111 47.432 2 0.0030896 61564 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.009 68.86 419140000 6392800 407870000 4878400 0 0 0 0 0 0 0 0 0 0 0 0 57717 4432 51852 486366;486367;486368;486369 385942;385943 385942 1 VPSSWQVK Unmodified 929.49707 0.49706667 2165 Q08AF3 SLFN5 Schlafen family member 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 40.323 39.077 2 0.01467 52559 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.352 52.138 207620000 62327000 36089000 4329000 0 0 13474000 9114800 8778800 11342000 13966000 15581000 0 13326000 0 19295000 57718 2165 51853 486370;486371;486372;486373;486374;486375;486376;486377;486378;486379;486380 385944;385945;385946 385945 3 VPSTEAEALASSLMGLFEK Oxidation (M) 1994.9871 0.98705864 1620 P50395 GDI2 Rab GDP dissociation inhibitor beta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 3 1 99.728 95.061 2;3 1.6164E-52 117866 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 139.66 131.6 304760000 17495000 281730000 5539800 0 0 0 0 0 0 0 0 0 0 0 0 57719 1620 51854 486381;486382;486383;486384;486385 385947;385948;385949;385950;385951;385952;385953;385954 385947 2603 7 VPSTEAEALASSLMGLFEK Unmodified 1978.9921 0.99214402 1620 P50395 GDI2 Rab GDP dissociation inhibitor beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 1.83 0.373 1 5 3 2 1 103.78 99.974 2;3 9.6713E-65 121791 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 103.87 92.81 573400000 149720000 421750000 1926100 0 0 0 0 0 0 0 0 0 0 0 0 57720 1620 51854 486386;486387;486388;486389;486390;486391 385955;385956;385957;385958;385959;385960;385961;385962;385963 385960 9 VPSTETEALASNLMGMFEK Oxidation (M) 2069.9649 0.96494299 1294 P31150 GDI1 Rab GDP dissociation inhibitor alpha yes yes 0 1 0 By MS/MS By MS/MS 2.22 0.416 7 2 7 2 94.451 90.472 2;3 1.0317E-09 112679 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.654 77.096 171000000 0 167240000 3767900 0 0 0 0 0 0 0 0 0 0 0 0 57721 1294 51855 486392;486393;486394;486395;486396;486397;486398;486399;486400 385964;385965;385966;385967;385968 385967 1907;1908 5 VPSTETEALASNLMGMFEK Unmodified 2053.97 0.97002836 1294 P31150 GDI1 Rab GDP dissociation inhibitor alpha yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 99.123 94.864 2;3 1.8168E-244 117223 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 259.68 222.35 81458000 0 81458000 0 0 0 0 0 0 0 0 0 0 0 0 0 57722 1294 51855 486401;486402;486403 385969;385970;385971;385972 385969 4 VPSVAEAPQLRPAGTAAAK Unmodified 1833.0108 0.010846043 2839 Q63ZY3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 54.689 54.79 3 6.4004E-05 61961 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.528 49.894 72095000 0 0 0 7208900 4230900 5470700 5165300 4390200 6053100 0 0 11971000 8614400 7772600 11217000 57723 2839 51856 486404;486405;486406;486407;486408;486409;486410;486411;486412;486413 385973;385974;385975;385976;385977;385978;385979;385980;385981;385982;385983 385980 11 VPSVSSSALVSSLHLLK Unmodified 1722.988 0.98798534 5267 Q9Y678 COPG1 Coatomer subunit gamma-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 6 4 2 2 1 1 1 1 90.046 86.858 3 0.00012206 99829 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.281 48.907 40001000 9994300 16457000 0 0 0 0 0 0 0 2903700 0 0 0 0 10646000 57724 5267 51857 486414;486415;486416;486417 385984;385985;385986 385985 3 VPTANVSVVDLTCR Unmodified 1529.7872 0.78717704 782 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 2 1 1 1 1 1 2 2 1 2 2 73.495 73.569 2;3 2.5969E-227 85394 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 242.97 230.01 1425400000 0 0 0 85773000 16413000 19332000 11345000 8217400 10652000 0 200330000 237000000 0 129640000 706710000 57725 782 51858 486418;486419;486420;486421;486422;486423;486424;486425;486426;486427;486428;486429;486430;486431;486432;486433 385987;385988;385989;385990;385991;385992;385993;385994;385995;385996;385997;385998;385999;386000;386001;386002;386003;386004;386005;386006;386007 386005 20 VPTANVSVVDLTCRLEK Unmodified 1900.0088 0.0087971324 782 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 1 1 1 1 1 1 2 2 1 2 2 78.76 78.849 2;3 7.8981E-144 90189 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 180.02 168.79 2723700000 0 0 0 53157000 14973000 44803000 12626000 21452000 28862000 39003000 325910000 264460000 22536000 190910000 1705000000 57726 782 51859 486434;486435;486436;486437;486438;486439;486440;486441;486442;486443;486444;486445;486446;486447;486448;486449 386008;386009;386010;386011;386012;386013;386014;386015;386016;386017;386018;386019;386020;386021;386022;386023;386024;386025 386018 18 VPTEENEMSSEADMECLNQRPPENPDTDK 2 Oxidation (M) 3393.3919 0.39189378 3633 Q92598 HSPH1 Heat shock protein 105 kDa yes yes 0 2 1 By MS/MS By MS/MS 2 0 2 1 1 48.088 41.394 3 2.1096E-33 54549 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.063 95.083 55178000 14365000 40813000 0 0 0 0 0 0 0 0 0 0 0 0 0 57727 3633 51860 486450;486451 386026;386027;386028 386026 5137;5138 3 VPTEENEMSSEADMECLNQRPPENPDTDK Oxidation (M) 3377.397 0.39697915 3633 Q92598 HSPH1 Heat shock protein 105 kDa yes yes 0 1 1 By matching By MS/MS By matching By matching By MS/MS 5.57 3.85 3 1 3 1 3 1 1 1 56.839 53.485 3 2.0817E-181 67944 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 195.73 195.49 177030000 13774000 147650000 0 0 0 0 0 0 0 0 4440100 0 0 3301200 7867200 57728 3633 51860 486452;486453;486454;486455;486456;486457;486458 386029;386030;386031;386032;386033 386032 5137;5138 5 VPTEENEMSSEADMECLNQRPPENPDTDK Unmodified 3361.4021 0.40206453 3633 Q92598 HSPH1 Heat shock protein 105 kDa yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 5.4 3.77 2 1 2 1 2 1 1 65.343 61.713 3 2.0847E-138 80279 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 158.8 158.77 198500000 23353000 143070000 0 0 0 0 0 0 0 0 0 0 0 4651400 27424000 57729 3633 51860 486459;486460;486461;486462;486463 386034;386035;386036;386037;386038;386039 386039 6 VPTEPPATSVAAR Unmodified 1294.6881 0.68811492 3637 Q92610 ZNF592 Zinc finger protein 592 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 39.581 39.755 2 0.012726 43189 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.939 18.168 56962000 0 0 0 5600000 5515000 4285800 0 3591000 4336300 6686500 6327900 6295500 0 5103100 9220800 57730 3637 51861 486464;486465;486466;486467;486468;486469;486470;486471;486472;486473 386040;386041;386042;386043;386044;386045 386042 4 VPTIFPLR Unmodified 941.56984 0.56983769 3812 Q96EK4 THAP11 THAP domain-containing protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 80.254 80.286 2 0.018051 93194 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 64.757 42.266 28501000 0 0 0 1904500 2222200 0 2505200 2215300 2981500 4093400 0 5009000 4142900 3426700 0 57731 3812 51862 486474;486475;486476;486477;486478;486479;486480;486481;486482 386046;386047;386048 386048 3 VPTIFPLRGVNER Unmodified 1496.8463 0.8463469 3812 Q96EK4 THAP11 THAP domain-containing protein 11 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 76.576 76.611 3 0.010042 88116 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 30.484 23.603 26276000 0 0 0 2065600 0 5673800 0 3060300 4607000 2784500 0 5634600 2450400 0 0 57732 3812 51863 486483;486484;486485;486486;486487;486488;486489 386049 386049 1 VPTISINK Unmodified 870.51747 0.51746776 2055;1408 Q01518;P40123 CAP1;CAP2 Adenylyl cyclase-associated protein 1;Adenylyl cyclase-associated protein 2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.29 3.67 4 2 11 2 3 1 1 1 1 1 1 1 1 1 1 1 1 47.961 46.415 2 0.0071071 53017 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 90.777 38.477 2853200000 938340000 1308000000 54091000 36671000 23816000 40672000 31314000 40414000 17892000 65266000 61055000 45767000 37435000 0 152440000 57733 2055;1408 51864 486490;486491;486492;486493;486494;486495;486496;486497;486498;486499;486500;486501;486502;486503;486504;486505;486506 386050;386051;386052;386053;386054;386055;386056;386057;386058;386059;386060;386061 386060 11 VPTLAVPAISLPDDVR Unmodified 1661.9352 0.93522148 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 90.15 90.301 2 0.00063938 104650 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.731 64.321 8259800 0 0 0 0 0 0 0 1384500 0 2389700 0 0 0 0 4485600 57734 1201 51865 486507;486508;486509 386062 386062 1 VPTLAVPAISLPDDVRR Unmodified 1818.0363 0.036332512 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 0 1 By MS/MS 10 0 1 1 85.182 85.35 3 0.0015626 98566 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.52 27.348 7734100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7734100 57735 1201 51866 486510 386063 386063 1 VPTPSSVASAETNSQQPGPDVPVLEMK Oxidation (M) 2780.3538 0.35383942 3662 Q92793 CREBBP CREB-binding protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 77.353 77.491 3 2.7123E-25 89524 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.649 66.456 52745000 0 0 0 0 0 0 0 0 0 11700000 8857900 17135000 7160000 7891100 0 57736 3662 51867 486511;486512;486513;486514;486515 386064;386065;386066;386067;386068 386068 5193 5 VPTQEPTHREPTR Unmodified 1546.7852 0.7852032 2839 Q63ZY3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 11.744 11.927 3 0.011872 10316 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 38.799 20.386 26752000 0 0 0 0 0 3126900 2217900 0 1599300 2814800 0 6778000 2709600 3036700 4469000 57737 2839 51868 486516;486517;486518;486519;486520;486521;486522;486523 386069 386069 1 VPTTEKPTVTVNFR Unmodified 1587.8621 0.86205654 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 1 2 2 2 1 2 2 2 2 2 2 55.389 55.547 2;3 8.1732E-08 62179 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 92.063 69.921 995450000 0 0 0 35140000 50132000 63328000 66663000 82102000 37497000 87849000 104150000 151920000 83000000 88185000 145490000 57738 2102 51869 486524;486525;486526;486527;486528;486529;486530;486531;486532;486533;486534;486535;486536;486537;486538;486539;486540;486541;486542;486543;486544;486545 386070;386071;386072;386073;386074;386075;386076;386077;386078;386079;386080;386081;386082;386083;386084 386074 12 VPTTEKPTVTVNFRK Unmodified 1715.957 0.95701956 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 45.816 45.985 3;4 4.6032E-09 51641 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 95.57 78.168 1154200000 0 0 0 36204000 38994000 86117000 54323000 71094000 70781000 100670000 103250000 216970000 128950000 97994000 148820000 57739 2102 51870 486546;486547;486548;486549;486550;486551;486552;486553;486554;486555;486556;486557;486558;486559;486560;486561;486562;486563;486564;486565;486566;486567;486568;486569 386085;386086;386087;386088;386089;386090;386091;386092;386093;386094;386095;386096 386087 10 VPTTLAEYCIK Unmodified 1293.6639 0.663874 3028 Q712K3 UBE2R2 Ubiquitin-conjugating enzyme E2 R2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67.336 66.242 2 0.00034474 75609 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 88.496 70.676 778620000 11629000 375470000 5900400 19936000 20441000 21356000 21190000 22284000 18604000 36490000 46271000 47096000 42706000 39715000 49525000 57740 3028 51871 486570;486571;486572;486573;486574;486575;486576;486577;486578;486579;486580;486581;486582;486583;486584 386097;386098;386099;386100;386101;386102;386103;386104;386105;386106;386107;386108;386109;386110;386111;386112 386110 16 VPTTLAEYCVK Unmodified 1279.6482 0.64822394 1574 P49427 CDC34 Ubiquitin-conjugating enzyme E2 R1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 65.059 58.739 2 0.0017501 75594 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.624 74.777 207270000 4364500 202910000 0 0 0 0 0 0 0 0 0 0 0 0 0 57741 1574 51872 486585;486586;486587 386113;386114 386113 2 VPVATYTNSSQPFR Unmodified 1565.7838 0.78380622 1556 P49005 POLD2 DNA polymerase delta subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.949 57.069 2 9.5682E-61 64775 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 215.89 195.59 297640000 0 0 0 22775000 23018000 17705000 20249000 24659000 13241000 28280000 28232000 33637000 20086000 24807000 40950000 57742 1556 51873 486588;486589;486590;486591;486592;486593;486594;486595;486596;486597;486598;486599 386115;386116;386117;386118;386119;386120;386121;386122;386123;386124;386125;386126 386117 12 VPVAVQGEDTVQSLTQGDGVAK Unmodified 2197.1226 0.12264092 741 P01024 C3 Complement C3;Complement C3 beta chain;C3-beta-c;Complement C3 alpha chain;C3a anaphylatoxin;Acylation stimulating protein;Complement C3b alpha' chain;Complement C3c alpha' chain fragment 1;Complement C3dg fragment;Complement C3g fragment;Complement C3d fragment;Complement C3f fragment;Complement C3c alpha' chain fragment 2 yes yes 0 0 0 By MS/MS 10 0 1 1 75.882 76.069 3 6.9581E-06 87716 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 50.956 45.246 9514500 0 0 0 0 0 0 0 9514500 0 0 0 0 0 0 0 57743 741 51874 486600 386127 386127 1 VPVCQPLK Unmodified 939.52117 0.52117293 3312 Q8N1G0 ZNF687 Zinc finger protein 687 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 33.609 33.938 2 0.041266 37499 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 50.025 23.422 19191000 0 0 0 0 0 3566100 0 0 3117500 0 8565900 0 0 0 3941100 57744 3312 51875 486601;486602;486603;486604 386128;386129 386128 2 VPVCQPLKEEDDDEGPVDK Unmodified 2167.9943 0.99432886 3312 Q8N1G0 ZNF687 Zinc finger protein 687 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 47.377 46.942 3 6.3815E-12 53428 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 87.676 78.857 56045000 0 9081900 0 0 3789000 4720000 4088600 3816100 0 8534700 7430000 6295200 0 0 8289700 57745 3312 51876 486605;486606;486607;486608;486609;486610;486611;486612;486613 386130;386131;386132;386133;386134;386135;386136 386136 7 VPVDEFDGK Unmodified 1004.4815 0.48147619 3608 Q92499 DDX1 ATP-dependent RNA helicase DDX1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 1 4 1 1 1 1 1 1 1 1 1 1 1 1 40.087 38.661 2 0.0032698 43657 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 93.162 72.463 1888700000 32117000 1010200000 0 48024000 70160000 68569000 64375000 53484000 60400000 86040000 83882000 85000000 57461000 56844000 112130000 57746 3608 51877 486614;486615;486616;486617;486618;486619;486620;486621;486622;486623;486624;486625;486626;486627;486628;486629;486630 386137;386138;386139;386140;386141;386142;386143;386144;386145;386146;386147;386148;386149;386150;386151 386146 12 VPVDWSK Unmodified 829.4334 0.43340378 986 P13797 PLS3 Plastin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 41.75 36.604 2 0.027727 48267 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.068 54.294 2164400000 127380000 1954000000 83099000 0 0 0 0 0 0 0 0 0 0 0 0 57747 986 51878 486631;486632;486633 386152 386152 1 VPVELPVEVPSK Unmodified 1291.7388 0.73875351 843 P07476 IVL Involucrin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 77.879 77.838 2 2.1923E-06 90247 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 113.69 86.572 37211000 0 0 0 23303000 0 0 3023900 10885000 0 0 0 0 0 0 0 57748 843 51879 486634;486635;486636 386153;386154;386155 386155 3 VPVELPVEVPSKQEEK Unmodified 1805.9775 0.97748023 843 P07476 IVL Involucrin yes yes 0 0 1 By MS/MS 10 0 1 1 70.477 69.851 3 0.0053071 80827 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 24.918 15.512 8795300 0 0 0 8795300 0 0 0 0 0 0 0 0 0 0 0 57749 843 51880 486637 386156 386156 1 VPVEQVTNFEEVCDEIK Unmodified 2033.9616 0.96157217 2142 Q07864 POLE DNA polymerase epsilon catalytic subunit A yes yes 0 0 0 By MS/MS 2.5 0.5 2 2 4 83.921 79.923 2;3 1.8603E-182 99235 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 244.44 206.04 160580000 0 160580000 0 0 0 0 0 0 0 0 0 0 0 0 0 57750 2142 51881 486638;486639;486640;486641 386157;386158;386159;386160 386157 3 VPVFSHEVVPDHLR Unmodified 1629.8627 0.86272524 3846 Q96G25 MED8 Mediator of RNA polymerase II transcription subunit 8 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 63.502 63.728 4 0.0286 71811 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 29.324 21.954 21063000 0 0 0 0 0 3965600 0 0 0 0 0 0 2635900 4622000 9839100 57751 3846 51882 486642;486643;486644;486645 386161 386161 1 VPVGDQPK Unmodified 838.45487 0.45486751 154 O00429 DNM1L Dynamin-1-like protein yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 14.498 10.816 2 0.035551 14397 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.21 69.316 1056800000 90478000 966310000 0 0 0 0 0 0 0 0 0 0 0 0 0 57752 154 51883 486646;486647 386162 386162 0 VPVGDQPPDIEYQIK Unmodified 1696.8672 0.8672015 1630 P50570 DNM2 Dynamin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.8 2.76 2 2 21 2 2 2 2 2 1 1 1 2 2 2 2 2 2 71.879 71.096 2;3 1.7203E-49 81560 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 194.86 160.09 1820000000 18967000 787200000 0 52985000 53180000 79662000 68446000 60058000 53713000 112740000 110990000 88544000 73065000 89183000 171220000 57753 1630 51884 486648;486649;486650;486651;486652;486653;486654;486655;486656;486657;486658;486659;486660;486661;486662;486663;486664;486665;486666;486667;486668;486669;486670;486671;486672 386163;386164;386165;386166;386167;386168;386169;386170;386171;386172;386173;386174;386175;386176;386177;386178;386179 386169 16 VPVHDVTDASK Unmodified 1166.5932 0.5931519 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.53 3.58 7 4 23 3 6 2 2 2 2 2 2 2 2 1 2 2 2 2 19.925 18.78 2;3 6.1286E-16 17638 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 159.34 139.56 7118500000 123480000 4492400000 567500000 110950000 122100000 173210000 118240000 108770000 105600000 177830000 48872000 260330000 142970000 142030000 424280000 57754 1124 51885 486673;486674;486675;486676;486677;486678;486679;486680;486681;486682;486683;486684;486685;486686;486687;486688;486689;486690;486691;486692;486693;486694;486695;486696;486697;486698;486699;486700;486701;486702;486703;486704;486705;486706 386180;386181;386182;386183;386184;386185;386186;386187;386188;386189;386190;386191;386192;386193;386194;386195;386196;386197;386198;386199;386200;386201;386202;386203;386204;386205;386206;386207;386208;386209;386210;386211;386212;386213;386214 386206 27 VPVHQHSPSEPFLEK Unmodified 1729.8788 0.87876924 4814 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 40.536 40.614 3 0.0007897 44347 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 51.03 31.707 49236000 0 0 0 0 2298400 10156000 5971500 6079700 9037900 0 0 0 6488800 9203900 0 57755 4814 51886 486707;486708;486709;486710;486711;486712;486713 386215;386216;386217;386218 386217 2 VPVLISPTLK Unmodified 1065.6798 0.67978207 1462 P42684 ABL2 Abelson tyrosine-protein kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 77.291 76.166 2 0.0015063 87729 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 90.64 72.316 506860000 24184000 25668000 2556100 25206000 30492000 29427000 42096000 35068000 31389000 41604000 43890000 51905000 34184000 32627000 56560000 57756 1462 51887 486714;486715;486716;486717;486718;486719;486720;486721;486722;486723;486724;486725;486726;486727;486728;486729 386219;386220;386221;386222;386223;386224;386225;386226;386227;386228;386229;386230;386231;386232;386233;386234 386221 16 VPVLLEEQSIVK Unmodified 1352.7915 0.79151736 4598 Q9NRF8 CTPS2 CTP synthase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.19 79.239 2 0.00067277 91152 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.143 66.455 99983000 0 0 0 3630000 3626400 7300200 3663900 6878100 0 8634500 15053000 12748000 5926700 8833200 23688000 57757 4598 51888 486730;486731;486732;486733;486734;486735;486736;486737;486738;486739;486740 386235;386236;386237;386238;386239;386240;386241;386242;386243;386244;386245;386246 386238 12 VPVNLLNSPDCDVK Unmodified 1568.7868 0.78684269 1331 P33981 TTK Dual specificity protein kinase TTK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.549 68.628 2 8.6276E-08 77733 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 112.13 104.74 119950000 0 0 0 5126500 5671500 6198600 6806400 6633000 9627800 8781100 13713000 18971000 13047000 10498000 14872000 57758 1331 51889 486741;486742;486743;486744;486745;486746;486747;486748;486749;486750;486751;486752 386247;386248;386249;386250;386251;386252;386253;386254;386255;386256;386257;386258 386254 12 VPVPGPGSGGNGPEREGPEEPGLAK Unmodified 2383.1768 0.17680175 3007 Q6ZRV2 FAM83H Protein FAM83H yes yes 0 0 1 By MS/MS 10 0 1 1 53.483 52.833 3 0.025197 60694 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 18.56 10.372 5069300 0 0 0 5069300 0 0 0 0 0 0 0 0 0 0 0 57759 3007 51890 486753 386259 386259 1 VPVPIGTER Unmodified 966.54983 0.54983053 472 O75179 ANKRD17 Ankyrin repeat domain-containing protein 17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 44.967 45.206 2 0.0074164 50427 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 72.485 26.469 269630000 0 0 0 22562000 0 23514000 23654000 0 0 31545000 46582000 40674000 0 29653000 51444000 57760 472 51891 486754;486755;486756;486757;486758;486759;486760;486761 386260;386261;386262;386263;386264;386265 386263 6 VPVPLNTTK Unmodified 967.57023 0.57023162 5298 Q9Y6X8 ZHX2 Zinc fingers and homeoboxes protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 2 1 1 1 1 1 1 1 1 1 41.819 41.986 2 0.019674 46851 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 53.775 40.948 122000000 0 0 0 7330800 7838100 17723000 8793300 9566900 5947000 10611000 13016000 12193000 8803400 8891400 11290000 57761 5298 51892 486762;486763;486764;486765;486766;486767;486768;486769;486770;486771;486772;486773;486774 386266;386267;386268;386269 386267 4 VPVPPNVAFELDRTR Unmodified 1708.9261 0.92605378 3679 Q92888 ARHGEF1 Rho guanine nucleotide exchange factor 1 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 77.436 77.522 3 0.027694 89571 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 29.324 23.544 7151200 0 0 0 0 0 3844500 0 0 3306700 0 0 0 0 0 0 57762 3679 51893 486775;486776 386270 386270 1 VPVPQHLPEDLTEK Unmodified 1600.8461 0.84607213 4803 Q9P215 POGK Pogo transposable element with KRAB domain yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 65.817 64.204 3 0.0013293 83020 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.69 50.52 158320000 6958900 56383000 15002000 0 4568000 7669200 0 0 8444400 8229200 9353100 11166000 9774200 8799600 11974000 57763 4803 51894 486777;486778;486779;486780;486781;486782;486783;486784;486785;486786;486787;486788;486789 386271;386272;386273;386274;386275;386276 386272 6 VPVQALPMVVPPQEPDKPPANVATTLPIR Oxidation (M) 3089.6947 0.69472721 472 O75179 ANKRD17 Ankyrin repeat domain-containing protein 17 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 2 1 1 85.532 85.694 3;4 5.1258E-19 99308 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.877 56.554 76493000 0 0 0 0 0 0 0 0 5445100 18316000 21129000 0 0 4963700 26639000 57764 472 51895 486790;486791;486792;486793;486794;486795 386277;386278;386279;386280;386281;386282 386279 598 6 VPVQALPMVVPPQEPDKPPANVATTLPIR Unmodified 3073.6998 0.69981259 472 O75179 ANKRD17 Ankyrin repeat domain-containing protein 17 yes yes 0 0 1 By MS/MS 10 0 1 1 88.936 89.08 3 0.0032337 103000 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 22.723 20.528 3564800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3564800 57765 472 51895 486796 386283;386284 386283 2 VPVSAPSSSDPWTGR Unmodified 1541.7474 0.74742071 1143 P22681 CBL E3 ubiquitin-protein ligase CBL yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 57.93 58.326 2 0.0013283 65632 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.019 39.155 9256000 0 0 0 0 0 0 0 0 0 0 0 0 0 3230700 6025300 57766 1143 51896 486797;486798;486799 386285;386286 386286 2 VPVSDLLLSYESPK Unmodified 1545.829 0.82902508 2582 Q15813 TBCE Tubulin-specific chaperone E yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.24 3.75 5 1 11 1 3 2 1 1 1 1 1 1 1 1 1 1 1 86.461 85 2;3 2.586E-18 106141 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 153.11 132.9 868350000 11419000 686040000 23541000 0 5872800 17575000 12231000 9295400 8381100 20743000 13543000 15233000 8465100 9773500 26239000 57767 2582 51897 486800;486801;486802;486803;486804;486805;486806;486807;486808;486809;486810;486811;486812;486813;486814;486815;486816 386287;386288;386289;386290;386291;386292;386293;386294;386295;386296;386297;386298;386299;386300;386301;386302;386303;386304;386305;386306 386292 19 VPVSEGLEHSDLPDGTGEFLDAWLMLVEK Oxidation (M) 3198.5431 0.54309675 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 1 0 By MS/MS 2 0 1 1 102.79 94.658 3 2.521E-67 121683 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 121.3 116.73 53109000 53109000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57768 3119 51898 486817 386307 386307 4741 1 VPVSEGLEHSDLPDGTGEFLDAWLMLVEK Unmodified 3182.5482 0.54818213 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS 2 0 1 1 103.11 94.979 3 5.0919E-48 122084 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 112.11 101.87 50735000 50735000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57769 3119 51898 486818 386308 386308 1 VPVSVNLLSK Unmodified 1054.6386 0.63864553 571 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 69.756 69.807 2 0.010295 80515 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 56.258 37.476 19823000 0 0 0 0 1863400 2230100 1979700 0 0 3617200 3892900 0 3054000 3185300 0 57770 571 51899 486819;486820;486821;486822;486823;486824;486825 386309;386310;386311 386311 3 VPVTYLELLS Unmodified 1132.638 0.63797683 4592 Q9NR46 SH3GLB2 Endophilin-B2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.67 1.6 1 23 1 2 2 2 2 2 2 2 2 2 1 2 2 95.013 94.887 1;2 0.0021438 114988 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.43 90.064 375850000 0 181860000 0 4276600 12315000 12504000 12384000 21913000 12722000 30498000 20036000 22565000 9061500 12183000 23531000 57771 4592 51900 486826;486827;486828;486829;486830;486831;486832;486833;486834;486835;486836;486837;486838;486839;486840;486841;486842;486843;486844;486845;486846;486847;486848;486849 386312;386313;386314;386315 386314 3 VPVVEIK Unmodified 782.49019 0.49019038 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.086 47.252 2 0.023406 53174 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 86.866 29.403 351560000 0 0 0 16200000 24103000 26887000 24184000 34341000 22704000 34960000 29416000 31919000 44107000 27574000 35163000 57772 3023 51901 486850;486851;486852;486853;486854;486855;486856;486857;486858;486859;486860;486861 386316;386317 386316 2 VPVVKEDDEPEEEDEEEMGHAETYAEYMPIK Unmodified 3636.5648 0.56475599 17 A3KN83 SBNO1 Protein strawberry notch homolog 1 yes yes 0 0 1 By MS/MS 2 0 1 1 83.375 75.245 4 1.6469E-34 98426 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.122 86.24 17534000 17534000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57773 17 51902 486862 386318 386318 1 VPVVMLEPIR Oxidation (M) 1167.6686 0.66856545 261 O15164 TRIM24 Transcription intermediary factor 1-alpha yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.868 74.932 2 0.0022043 86367 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 76.827 50.225 97408000 0 0 0 5940800 6992900 11073000 7210100 6536200 5733900 8559800 7795200 11995000 8508000 6201700 10862000 57774 261 51903 486863;486864;486865;486866;486867;486868;486869;486870;486871;486872;486873;486874 386319;386320;386321;386322;386323;386324;386325;386326;386327;386328;386329;386330 386325 352 9 VPVVMLEPIR Unmodified 1151.6737 0.67365083 261 O15164 TRIM24 Transcription intermediary factor 1-alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.798 80.858 2 0.0017421 93082 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.948 80.765 61397000 0 0 0 1888000 2028300 5630600 2891000 4531700 3503600 5820100 5717600 5738100 3858800 5784000 14005000 57775 261 51903 486875;486876;486877;486878;486879;486880;486881;486882;486883;486884;486885;486886 386331;386332;386333;386334;386335;386336;386337;386338;386339;386340;386341;386342 386334 12 VPVYCTK Unmodified 865.43677 0.4367746 653 O95394 PGM3 Phosphoacetylglucosamine mutase yes yes 0 0 0 By MS/MS By MS/MS 2.67 0.471 1 2 1 2 26.181 21.81 2 0.039422 28315 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.297 62.491 261820000 603630 261220000 0 0 0 0 0 0 0 0 0 0 0 0 0 57776 653 51904 486887;486888;486889 386343 386343 1 VPYEEIR Unmodified 904.46543 0.46543219 4630 Q9NSV4 DIAPH3 Protein diaphanous homolog 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 36.12 36.297 2 0.023373 40029 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 88.643 60.389 260510000 0 0 0 13615000 15544000 26882000 0 26283000 14088000 26165000 23200000 36500000 0 30207000 48024000 57777 4630 51905 486890;486891;486892;486893;486894;486895;486896;486897;486898;486899 386344;386345;386346 386345 3 VPYEIQK Unmodified 875.47527 0.4752686 2264 Q13287 NMI N-myc-interactor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 35.958 31.061 2 0.031622 40456 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.643 38.333 346500000 6857000 336210000 3432500 0 0 0 0 0 0 0 0 0 0 0 0 57778 2264 51906 486900;486901;486902 386347 386347 1 VPYETLNK Unmodified 962.5073 0.50729701 3055 Q7L5Y9 MAEA Macrophage erythroblast attacher yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 35.88 31.751 2 0.035551 41573 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.21 54.85 339500000 0 335480000 4016600 0 0 0 0 0 0 0 0 0 0 0 0 57779 3055 51907 486903;486904 386348 386348 0 VPYLAVAR Unmodified 887.52289 0.52288749 1081 P18858 LIG1 DNA ligase 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.306 55.437 2 0.015305 61977 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 69.093 46.962 266850000 0 0 0 13883000 16400000 26686000 19059000 19687000 16659000 28231000 23268000 25941000 22238000 24004000 30797000 57780 1081 51908 486905;486906;486907;486908;486909;486910;486911;486912;486913;486914;486915;486916 386349;386350;386351;386352 386351 4 VPYVIISAAK Unmodified 1059.6328 0.63283187 1234 P28340 POLD1 DNA polymerase delta catalytic subunit yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 68.482 68.583 2 0.010696 78540 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.549 42.961 14514000 0 0 0 0 1233800 1436800 0 0 0 2710900 0 2815400 2067300 0 4249800 57781 1234 51909 486917;486918;486919;486920;486921;486922 386353 386353 1 VQAAEHTLR Unmodified 1023.5461 0.54614213 4311 Q9GZZ9 UBA5 Ubiquitin-like modifier-activating enzyme 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 11.73 11.877 2 0.003237 10400 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 90.709 20.184 121870000 0 0 0 5574000 4993300 10893000 8837100 6874600 5146800 11559000 7588200 15580000 12515000 10644000 21665000 57782 4311 51910 486923;486924;486925;486926;486927;486928;486929;486930;486931;486932;486933;486934 386354;386355;386356;386357;386358;386359;386360;386361;386362;386363;386364;386365;386366 386364 13 VQADQVDVK Unmodified 1000.5189 0.51892433 3226 Q8IVF2 AHNAK2 Protein AHNAK2 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 21.81 21.968 2 0.040615 21715 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 44.349 19.53 8599600 0 0 0 0 0 4450300 0 0 0 0 0 0 0 4149300 0 57783 3226 51911 486935;486936 386367 386367 1 VQADVPPEILNNVGALHFR Unmodified 2088.1116 0.11162272 2945 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 87.26 87.413 3 0.00066494 101049 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.663 43.169 18604000 0 0 0 0 0 0 0 0 1339000 3638000 0 0 0 0 13627000 57784 2945 51912 486937;486938;486939 386368 386368 1 VQAEDEANGLQTTPASR Unmodified 1785.8493 0.8493196 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.975 37.157 2 1.3444E-31 40635 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 151.74 132.99 128550000 0 0 0 5561300 5530500 8252400 7152500 5980500 7495100 11894000 15009000 21911000 10071000 8814200 20882000 57785 1286 51913 486940;486941;486942;486943;486944;486945;486946;486947;486948;486949;486950;486951 386369;386370;386371;386372;386373;386374;386375;386376;386377;386378;386379;386380 386378 12 VQAEELGR Unmodified 900.46649 0.46649483 317 O43314;Q6PFW1 PPIP5K2;PPIP5K1 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2;Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1 yes no 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 20.521 20.715 2 0.019504 21550 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 63.565 18.954 25973000 0 0 0 0 0 5816300 7434200 0 0 0 0 0 0 0 12722000 57786 317 51914 486952;486953;486954 386381;386382 386382 2 VQAELDETK Unmodified 1031.5135 0.5135046 288 O15498 YKT6 Synaptobrevin homolog YKT6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 21.405 20.969 2 2.7096E-05 21721 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 140.5 88.714 426590000 0 30300000 0 24895000 19217000 35175000 36469000 0 20423000 43239000 43567000 46056000 43730000 32201000 51317000 57787 288 51915 486955;486956;486957;486958;486959;486960;486961;486962;486963;486964;486965;486966;486967 386383;386384;386385;386386;386387;386388;386389;386390;386391;386392;386393;386394 386389 9 VQAELSQPLTAGGAISELL Unmodified 1896.0204 0.020407676 2514 Q15291 RBBP5 Retinoblastoma-binding protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.6 3.69 1 1 1 7 1 2 1 1 1 1 1 1 1 98.125 97.922 2 8.203E-65 116046 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145.06 123.82 360320000 13710000 320890000 0 0 1255500 0 0 900620 0 6883400 5023100 2948200 0 2400000 6308700 57788 2514 51916 486968;486969;486970;486971;486972;486973;486974;486975;486976;486977 386395;386396;386397;386398;386399;386400 386396 6 VQAEREAAQSR Unmodified 1243.6269 0.62691165 2501 Q15149 PLEC Plectin yes yes 0 0 1 By MS/MS By matching By matching By matching By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 6.7107 6.7988 3 0.020578 4770 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 30.004 5.1511 15109000 0 0 0 3062300 1022800 1379100 0 1355700 0 1603900 4520100 0 0 2164800 0 57789 2501 51917 486978;486979;486980;486981;486982;486983;486984 386401;386402 386401 2 VQAGDVITIDK Unmodified 1157.6292 0.62920306 5077 Q9Y230 RUVBL2 RuvB-like 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53.619 52.539 2 0.00035532 58401 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.134 45.738 4204300000 62645000 2320300000 6496200 68711000 76647000 132060000 92786000 83624000 88314000 145980000 189520000 369590000 153010000 138610000 276040000 57790 5077 51918 486985;486986;486987;486988;486989;486990;486991;486992;486993;486994;486995;486996;486997;486998;486999 386403;386404;386405;386406;386407;386408;386409;386410;386411;386412;386413;386414;386415;386416;386417;386418;386419;386420 386407 18 VQAINVSSR Unmodified 972.53524 0.53524309 3770 Q96C19 EFHD2 EF-hand domain-containing protein D2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 27.678 27.916 2 0.0032698 29860 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 93.162 23.779 164890000 0 0 0 0 7760900 16228000 11553000 9681100 6839200 13125000 19671000 23922000 11765000 16286000 28062000 57791 3770 51919 487000;487001;487002;487003;487004;487005;487006;487007;487008;487009;487010 386421;386422;386423;386424;386425;386426;386427;386428;386429;386430;386431 386429 10 VQAINVSSRFEEEIK Unmodified 1747.9105 0.9104633 3770 Q96C19 EFHD2 EF-hand domain-containing protein D2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.29 0.452 5 2 3 2 2 74.76 69.733 2;3 1.4641E-14 90802 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 147.24 113.35 469550000 417200000 29514000 22838000 0 0 0 0 0 0 0 0 0 0 0 0 57792 3770 51920 487011;487012;487013;487014;487015;487016;487017 386432;386433;386434;386435;386436 386435 4 VQALARENEVLK Unmodified 1368.7725 0.77251325 3517 Q8TEQ0 SNX29 Sorting nexin-29 yes yes 0 0 1 By MS/MS 2 0 1 1 44.79 40.975 3 0.04446 51727 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 36.982 8.7759 5224600 0 0 5224600 0 0 0 0 0 0 0 0 0 0 0 0 57793 3517 51921 487018 386437 386437 1 VQALEEANNDLENK Unmodified 1585.7584 0.75837933 1354 P35527;CON__P35527 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.99 2.61 1 4 4 59 4 4 1 7 5 4 4 11 5 6 5 2 4 4 2 46.96 46.285 2;3 1.0723E-135 52829 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 214.64 206.7 + 112840000000 57324000 940850000 3577700 12157000000 6212700000 7746400000 5024300000 23149000000 6402200000 10253000000 9721100000 12161000000 10153000000 5067500000 3786500000 57794 1354 51922 487019;487020;487021;487022;487023;487024;487025;487026;487027;487028;487029;487030;487031;487032;487033;487034;487035;487036;487037;487038;487039;487040;487041;487042;487043;487044;487045;487046;487047;487048;487049;487050;487051;487052;487053;487054;487055;487056;487057;487058;487059;487060;487061;487062;487063;487064;487065;487066;487067;487068;487069;487070;487071;487072;487073;487074;487075;487076;487077;487078;487079;487080;487081;487082;487083;487084;487085;487086 386438;386439;386440;386441;386442;386443;386444;386445;386446;386447;386448;386449;386450;386451;386452;386453;386454;386455;386456;386457;386458;386459;386460;386461;386462;386463;386464;386465;386466;386467;386468;386469;386470;386471;386472;386473;386474;386475;386476;386477;386478;386479;386480;386481;386482;386483;386484;386485;386486;386487;386488;386489;386490;386491;386492;386493;386494;386495;386496;386497;386498;386499;386500;386501;386502;386503;386504;386505;386506;386507;386508;386509;386510;386511;386512;386513;386514;386515;386516;386517;386518;386519;386520;386521;386522;386523;386524;386525;386526;386527;386528;386529;386530;386531;386532;386533;386534;386535;386536;386537;386538;386539 386447 97 VQALEQR Unmodified 842.46102 0.46101552 99 Q6KB66;CON__Q6KB66-1;CON__Q0VBK2 KRT80 Keratin, type II cytoskeletal 80 yes no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.44 14.602 2 0.019157 13753 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 110.63 56.108 + 197360000 0 0 0 46557000 12882000 10744000 11519000 27864000 7428000 17023000 12523000 17269000 19462000 10047000 4047800 57795 99 51923 487087;487088;487089;487090;487091;487092;487093;487094;487095;487096;487097;487098 386540;386541;386542;386543;386544;386545;386546;386547;386548 386543 8 VQALLNSR Unmodified 899.51886 0.51886475 4580 Q9NQX4 MYO5C Unconventional myosin-Vc yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 31.527 31.734 2 0.043878 35216 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 49.097 11.489 11274000 0 0 0 0 5082000 0 0 0 0 0 0 0 2977800 0 3214200 57796 4580 51924 487099;487100;487101 386549 386549 1 VQALNTVNQSK Unmodified 1200.6463 0.64625011 2795 Q5TCZ1 SH3PXD2A SH3 and PX domain-containing protein 2A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.796 24.999 2 0.00028579 26656 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 121.73 102.75 109330000 0 0 0 7152300 7253300 8479400 7453400 10953000 6928100 9787100 13596000 9954400 10091000 5446700 12237000 57797 2795 51925 487102;487103;487104;487105;487106;487107;487108;487109;487110;487111;487112;487113 386550;386551;386552;386553;386554;386555;386556;386557;386558;386559;386560;386561 386560 12 VQAMQISSEK Unmodified 1119.5594 0.55940893 4980 Q9UKY7 CDV3 Protein CDV3 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 30.188 29.801 2 0.0003426 31198 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 138.98 79.994 141270000 0 22934000 0 0 1029500 0 0 0 0 2218700 18697000 21486000 0 15890000 59015000 57798 4980 51926 487114;487115;487116;487117;487118;487119;487120 386562;386563;386564;386565;386566;386567 386564 5 VQAMQISSEK Oxidation (M) 1135.5543 0.55432356 4980 Q9UKY7 CDV3 Protein CDV3 homolog yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 14.829 15.258 2 0.0012982 13711 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 87.308 60.924 39707000 0 0 0 0 0 0 0 0 0 0 9294100 7385100 0 8367700 14660000 57799 4980 51926 487121;487122;487123;487124 386568;386569;386570;386571;386572 386571 6327 4 VQAMQISSEKEEDDNEK Unmodified 1978.879 0.87896475 4980 Q9UKY7 CDV3 Protein CDV3 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 29.001 29.444 3 3.6645E-25 30817 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.98 77.003 74597000 0 0 0 0 0 0 2428900 0 0 0 10085000 16349000 0 11381000 34353000 57800 4980 51927 487125;487126;487127;487128;487129 386573;386574;386575;386576;386577 386574 5 VQAMQISSEKEEDDNEK Oxidation (M) 1994.8739 0.87387937 4980 Q9UKY7 CDV3 Protein CDV3 homolog yes yes 0 1 1 By MS/MS 10 0 1 1 17.153 17.707 3 7.5711E-05 17413 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 62.94 61.205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57801 4980 51927 487130 386578 386578 6327 1 VQAMQPAFASK Oxidation (M) 1192.591 0.59104341 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 2 1 2 2 1 2 2 1 1 1 1 30.432 30.59 2 0.003866 33409 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 95.523 66.605 121980000 0 0 0 5706300 11569000 7422800 10445000 7843100 4273300 17113000 14631000 15618000 9427600 6331900 11599000 57802 619 51928 487131;487132;487133;487134;487135;487136;487137;487138;487139;487140;487141;487142;487143;487144;487145;487146;487147 386579;386580;386581;386582;386583;386584;386585 386579 758 4 VQANLGAPDINIEGLDAK Unmodified 1836.9581 0.95814177 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.12 2.45 2 1 23 3 1 2 2 2 2 2 2 2 2 2 2 2 81.853 81.435 2;3 1.9872E-112 94028 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 196.11 178.3 704060000 0 216020000 0 8936800 31468000 27220000 36241000 42017000 36099000 49403000 36672000 55399000 40345000 41479000 82757000 57803 2172 51929 487148;487149;487150;487151;487152;487153;487154;487155;487156;487157;487158;487159;487160;487161;487162;487163;487164;487165;487166;487167;487168;487169;487170;487171;487172;487173 386586;386587;386588;386589;386590;386591;386592;386593;386594;386595;386596;386597;386598;386599;386600;386601;386602;386603;386604;386605 386593 19 VQAQAEQGQQELK Unmodified 1455.7318 0.73177065 4199 Q9BW19 KIFC1 Kinesin-like protein KIFC1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.145 21.351 2 1.6831E-42 21694 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 177.57 169.34 236090000 0 0 0 12010000 12519000 18304000 21010000 17551000 14820000 20461000 23242000 26397000 21490000 16645000 31643000 57804 4199 51930 487174;487175;487176;487177;487178;487179;487180;487181;487182;487183;487184;487185 386606;386607;386608;386609;386610;386611;386612;386613;386614;386615;386616;386617 386615 12 VQAQGHTLQVAGLR Unmodified 1476.8161 0.8161094 3293 Q8IZ83 ALDH16A1 Aldehyde dehydrogenase family 16 member A1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 46.898 46.961 3 0.016521 53587 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 43.813 30.935 30294000 0 0 0 8484800 2623700 0 0 0 0 0 5309700 0 0 3735200 10140000 57805 3293 51931 487186;487187;487188;487189;487190 386618;386619 386619 1 VQAQGPGLK Unmodified 896.50797 0.50796571 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.387 18.58 2 0.020027 17716 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.262 64.924 129600000 0 0 0 9023800 5607200 11139000 7945300 6171800 5552400 10589000 13825000 14708000 8137300 9325800 27572000 57806 487 51932 487191;487192;487193;487194;487195;487196;487197;487198;487199;487200;487201;487202 386620;386621;386622;386623 386621 1 VQAQHDYTATDTDELQLK Unmodified 2074.9807 0.98072771 162 O00499 BIN1 Myc box-dependent-interacting protein 1 yes yes 0 0 0 By MS/MS By matching 2.25 0.433 3 1 3 1 57.498 52.406 2;3 2.2448E-87 67672 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 200.55 186.29 230120000 0 227410000 2707700 0 0 0 0 0 0 0 0 0 0 0 0 57807 162 51933 487203;487204;487205;487206 386624;386625;386626 386625 3 VQAQLNTEQLLDDVVAK Unmodified 1883 6.5850998E-06 3957 Q96QD9 FYTTD1 UAP56-interacting factor yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 87.748 87.871 2 0.034744 101685 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 28.327 19.598 7692600 0 0 0 0 0 0 0 0 0 2272000 0 1391400 0 1202200 2826900 57808 3957 51934 487207;487208;487209;487210 386627 386627 1 VQAQVIQETIVPK Unmodified 1451.8348 0.83477916 2539 Q15459 SF3A1 Splicing factor 3A subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.91 3.42 4 2 16 1 4 1 1 1 1 2 2 1 1 1 1 1 2 2 69.206 67.864 2;3 5.3981E-23 86587 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 152.7 130.64 3301700000 34801000 1835600000 13117000 55651000 80913000 101370000 109660000 83982000 96856000 130370000 146330000 140970000 131490000 137050000 203440000 57809 2539 51935 487211;487212;487213;487214;487215;487216;487217;487218;487219;487220;487221;487222;487223;487224;487225;487226;487227;487228;487229;487230;487231;487232 386628;386629;386630;386631;386632;386633;386634;386635;386636;386637;386638;386639;386640;386641;386642;386643;386644;386645;386646;386647;386648;386649;386650;386651;386652 386634 24 VQASLAANTFTITGHAETK Unmodified 1959.0062 0.0061545955 1102 P20290 BTF3 Transcription factor BTF3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.48 3.88 11 3 17 7 4 3 1 3 2 2 1 2 1 3 2 71.21 68.909 2;3 9.5235E-69 83141 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 152.01 143.46 3933600000 3116900000 564800000 110450000 0 3744800 13503000 9128500 15285000 5322900 13629000 18259000 21085000 0 0 41448000 57810 1102 51936 487233;487234;487235;487236;487237;487238;487239;487240;487241;487242;487243;487244;487245;487246;487247;487248;487249;487250;487251;487252;487253;487254;487255;487256;487257;487258;487259;487260;487261;487262;487263 386653;386654;386655;386656;386657;386658;386659;386660;386661;386662;386663;386664;386665;386666;386667;386668;386669;386670;386671;386672;386673;386674;386675;386676;386677;386678;386679;386680;386681;386682;386683;386684;386685;386686;386687;386688;386689;386690;386691;386692;386693;386694;386695;386696 386674 42 VQAVCADVEK Unmodified 1117.5438 0.54375887 2473 Q15018 FAM175B BRISC complex subunit Abro1 yes yes 0 0 0 By MS/MS 2 0 1 1 30.188 25.794 2 0.039938 33795 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 55.064 22.223 17857000 0 17857000 0 0 0 0 0 0 0 0 0 0 0 0 0 57811 2473 51937 487264 386697 386697 1 VQAVHNLK Unmodified 907.52395 0.52395013 3745 Q96AY4 TTC28 Tetratricopeptide repeat protein 28 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 15.321 12.036 2 0.0365 17801 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.138 16.697 42250000 22025000 12306000 7918500 0 0 0 0 0 0 0 0 0 0 0 0 57812 3745 51938 487265;487266;487267 386698 386698 1 VQAVVAVAR Unmodified 911.55525 0.55525025 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.593 36.774 2 0.0090061 40849 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 67.981 27.713 199050000 0 0 0 7043000 7966700 22475000 10353000 9796400 8089900 16806000 21835000 25341000 13903000 16427000 39010000 57813 2047 51939 487268;487269;487270;487271;487272;487273;487274;487275;487276;487277;487278;487279 386699;386700;386701;386702;386703;386704;386705;386706;386707;386708;386709 386699 11 VQCAEVNR Unmodified 974.46036 0.46036359 2155 Q08378 GOLGA3 Golgin subfamily A member 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 10.28 10.476 2 0.039356 9484 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 50.703 23.907 15773000 0 0 0 0 0 1728400 0 1255500 1148100 1325400 0 3054800 2795100 1374900 3090900 57814 2155 51940 487280;487281;487282;487283;487284;487285;487286;487287 386710 386710 1 VQDAFAAAK Unmodified 919.47633 0.47633123 2059 Q01650 SLC7A5 Large neutral amino acids transporter small subunit 1 yes yes 0 0 0 By MS/MS By matching By matching By matching By matching 10 0 5 1 1 1 1 1 26.863 27.076 2 0.027043 29266 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 49.57 15.467 48282000 0 0 0 6855700 0 0 0 11217000 0 0 11751000 0 9427000 9031100 0 57815 2059 51941 487288;487289;487290;487291;487292 386711 386711 1 VQDAYTLR Unmodified 964.49779 0.49779495 1456 P42357 HAL Histidine ammonia-lyase yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 32.55 32.717 2 0.01042 36008 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 79.713 49.527 69699000 0 0 0 60657000 0 0 0 0 0 4436200 0 4605400 0 0 0 57816 1456 51942 487293;487294;487295 386712 386712 1 VQDDEVGDGTTSVTVLAAELLR Unmodified 2287.1543 0.15433498 1980 P78371 CCT2 T-complex protein 1 subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 2 1 1 2 2 2 2 2 2 2 97.203 97.303 2;3 5.958E-43 113454 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 134.14 119.11 111870000 0 0 0 5718000 0 2013300 1844700 3411300 3006700 32666000 19182000 10274000 0 5494400 28260000 57817 1980 51943 487296;487297;487298;487299;487300;487301;487302;487303;487304;487305;487306;487307;487308;487309;487310;487311;487312;487313 386713;386714;386715;386716;386717;386718;386719;386720;386721;386722;386723 386722 11 VQDFMEK Oxidation (M) 911.40587 0.4058684 2934 Q6P4A8 PLBD1 Phospholipase B-like 1;Phospholipase B-like 1 chain A;Phospholipase B-like 1 chain B;Phospholipase B-like 1 chain C yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 16.092 16.089 2 0.02894 15874 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 67.032 36.42 19177000 0 0 0 9775200 2242900 0 0 5590600 1568100 0 0 0 0 0 0 57818 2934 51944 487314;487315;487316;487317 386724;386725 386724 2 VQDGLSDIAEK Unmodified 1173.5877 0.58773217 1498 P46100 ATRX Transcriptional regulator ATRX yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 45.261 42.551 2 0.00096464 54521 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.29 66.289 87620000 0 81893000 0 0 0 0 0 0 5727300 0 0 0 0 0 0 57819 1498 51945 487318;487319;487320;487321;487322;487323;487324;487325;487326;487327 386726;386727;386728;386729;386730;386731;386732;386733;386734;386735 386728 10 VQDIEDEPILPEIPK Unmodified 1733.9087 0.90873196 2674 Q3MJ16 PLA2G4E Cytosolic phospholipase A2 epsilon yes yes 0 0 0 By MS/MS 10 0 1 1 83.965 83.57 2 0.00094542 97072 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 60.49 48.957 3633500 0 0 0 3633500 0 0 0 0 0 0 0 0 0 0 0 57820 2674 51946 487328 386736 386736 1 VQDIEQLK Unmodified 971.52876 0.52876073 4633 Q9NTI5 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 35.513 35.753 2 0.013643 38180 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.877 20.421 28615000 0 0 0 2693500 0 4671000 3208600 0 2672100 0 3943600 4932600 0 0 6493500 57821 4633 51947 487329;487330;487331;487332;487333;487334;487335 386737;386738;386739;386740 386738 4 VQDPSYAPPK Unmodified 1100.5502 0.55022446 3521 Q8TEW0 PARD3 Partitioning defective 3 homolog yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 28.997 29.416 2 0.03995 31050 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 40.067 9.8129 14866000 0 0 0 0 0 0 0 0 3100500 0 0 11765000 0 0 0 57822 3521 51948 487336;487337 386741 386741 1 VQDQDLPNTPHSK Unmodified 1477.7161 0.71612058 2160 Q08554 DSC1 Desmocollin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.5 1.94 2 30 1 1 3 3 2 3 3 2 3 2 2 3 2 2 22.732 22.665 2;3 5.0038E-10 23267 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 92.151 79.143 2283200000 0 63925000 1416500 378860000 125080000 128160000 81288000 517250000 75497000 156730000 144930000 235580000 213630000 89604000 71278000 57823 2160 51949 487338;487339;487340;487341;487342;487343;487344;487345;487346;487347;487348;487349;487350;487351;487352;487353;487354;487355;487356;487357;487358;487359;487360;487361;487362;487363;487364;487365;487366;487367;487368;487369 386742;386743;386744;386745;386746;386747;386748;386749;386750;386751;386752;386753;386754;386755;386756;386757;386758;386759 386750 18 VQDSAPVETPR Unmodified 1197.599 0.59896556 889 P09601 HMOX1 Heme oxygenase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 28.397 28.579 2 0.026524 31111 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 51.162 37.583 51903000 0 0 0 10040000 3259000 2725200 4134700 4831500 2363000 4966600 5979800 5334700 0 3690400 4578200 57824 889 51950 487370;487371;487372;487373;487374;487375;487376;487377;487378;487379;487380 386760 386760 1 VQDSNAEILANYRK Unmodified 1619.8267 0.82673367 4264 Q9BZF9 UACA Uveal autoantigen with coiled-coil domains and ankyrin repeats yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 47.072 46.883 3 0.0085424 52700 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 24.275 14.497 77042000 0 0 5946100 3901800 4466500 5792400 7333400 6402200 4916900 9503400 6521200 8757200 0 5522500 7978000 57825 4264 51951 487381;487382;487383;487384;487385;487386;487387;487388;487389;487390;487391;487392 386761;386762;386763;386764;386765;386766;386767 386761 7 VQDSVLIK Unmodified 900.52803 0.52803245 3078 Q7Z333 SETX Probable helicase senataxin yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 38.771 38.837 2 0.014742 43174 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 69.998 23.628 42918000 0 0 0 3964300 3800300 5009900 5419100 3718600 3804600 7204500 0 0 0 4486900 5509800 57826 3078 51952 487393;487394;487395;487396;487397;487398;487399;487400;487401 386768;386769;386770 386768 3 VQDYIQSK Unmodified 979.49746 0.4974606 433 O60825 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 23.706 23.869 2 0.0044044 25015 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 110.81 71.145 174120000 0 0 0 18321000 20412000 23443000 0 19098000 11962000 22464000 21096000 19511000 17810000 0 0 57827 433 51953 487402;487403;487404;487405;487406;487407;487408;487409;487410;487411 386771;386772;386773;386774;386775;386776;386777;386778;386779;386780 386777 8 VQEAIIHFR Unmodified 1111.6138 0.61382777 4944 Q9UJX3 ANAPC7 Anaphase-promoting complex subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 52.838 52.985 2 0.0030525 59826 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 127.02 80.027 104600000 0 0 0 7433700 0 10905000 8729800 0 4782100 0 8042300 0 20432000 0 44275000 57828 4944 51954 487412;487413;487414;487415;487416;487417;487418;487419;487420 386781;386782;386783;386784;386785;386786;386787;386788 386786 8 VQEAINSLGGSVFPK Unmodified 1544.8199 0.81985737 541 O75794 CDC123 Cell division cycle protein 123 homolog yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 4 2 12 1 4 1 1 1 1 1 1 1 1 1 1 1 1 1 77.083 75.616 2;3 7.4048E-40 94063 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 171.05 115.5 1094000000 19112000 930510000 2430000 4981400 4633100 11004000 6701800 6734200 5939100 13722000 21911000 16498000 8179300 10260000 31388000 57829 541 51955 487421;487422;487423;487424;487425;487426;487427;487428;487429;487430;487431;487432;487433;487434;487435;487436;487437;487438 386789;386790;386791;386792;386793;386794;386795;386796;386797;386798;386799;386800;386801;386802;386803;386804;386805;386806 386792 16 VQEAVLDK Unmodified 900.49165 0.49164694 4396 Q9H4A6 GOLPH3 Golgi phosphoprotein 3 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 27.785 23.105 2 0.021343 32641 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.743 41.62 85521000 8095900 77425000 0 0 0 0 0 0 0 0 0 0 0 0 0 57830 4396 51956 487439;487440;487441 386807;386808;386809 386809 2 VQEAVNYGLQVLDSAFEQLDIK Unmodified 2478.2642 0.26421978 2840;5195 Q641Q2;Q9Y4E1 FAM21A;FAM21C WASH complex subunit FAM21A;WASH complex subunit FAM21C no no 0 0 0 By MS/MS 2.5 0.5 1 1 2 102.01 97.916 3 1.5196E-05 121161 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.401 61.815 11714000 0 11714000 0 0 0 0 0 0 0 0 0 0 0 0 0 57831 2840;5195 51957 487442;487443 386810 386810 1 VQEFEHINGR Unmodified 1227.5996 0.59963426 2201 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.838 30.029 3 0.043114 32806 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 48.44 32.811 164380000 0 0 0 10462000 7430400 11707000 10190000 7734400 9338100 12214000 14767000 17845000 19850000 14322000 28520000 57832 2201 51958 487444;487445;487446;487447;487448;487449;487450;487451;487452;487453;487454;487455 386811;386812;386813 386811 2 VQEFEHVNGR Unmodified 1213.584 0.5839842 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 22 2 3 2 2 1 1 2 2 2 2 2 1 22.399 22.566 2;3 0.0057424 22434 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 66.621 33.359 530560000 0 0 0 34462000 26242000 39016000 35440000 24073000 3666600 56698000 49915000 85055000 69149000 51683000 55159000 57833 2451 51959 487456;487457;487458;487459;487460;487461;487462;487463;487464;487465;487466;487467;487468;487469;487470;487471;487472;487473;487474;487475;487476;487477 386814;386815;386816;386817;386818;386819;386820;386821;386822 386820 7 VQEGETIEDGARR Unmodified 1458.7063 0.70628418 1378 P36639 NUDT1 7,8-dihydro-8-oxoguanine triphosphatase yes yes 0 0 1 By MS/MS 10 0 1 1 20.135 20.652 3 0.00073102 20945 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 47.189 19.78 18472000 0 0 0 0 0 0 0 0 0 0 18472000 0 0 0 0 57834 1378 51960 487478 386823 386823 1 VQEGSQEEELRQANRELEK Unmodified 2271.1091 0.10911612 4102 Q9BQS8 FYCO1 FYVE and coiled-coil domain-containing protein 1 yes yes 0 0 2 By MS/MS 2 0 1 1 45.825 42.01 4 0.02166 53185 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 32.181 23.134 10044000 0 0 10044000 0 0 0 0 0 0 0 0 0 0 0 0 57835 4102 51961 487479 386824 386824 0 VQEGVRNISNQLSITTK Unmodified 1886.0221 0.022139011 2176 Q0VDG4 SCRN3 Secernin-3 yes yes 0 0 1 By MS/MS 2 0 1 1 67.941 59.647 3 0.011945 79879 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 37.645 20.979 7780300 7780300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57836 2176 51962 487480 386825 386825 1 VQEIITWLK Unmodified 1128.6543 0.6542956 3295 Q8IZH2 XRN1 5'-3' exoribonuclease 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.693 82.756 2 0.013807 95849 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 59.245 35.817 42702000 0 0 0 1165700 1870300 3165400 2134600 2672800 2491700 3468500 3038700 2886200 4422000 4773100 10613000 57837 3295 51963 487481;487482;487483;487484;487485;487486;487487;487488;487489;487490;487491;487492 386826;386827;386828;386829 386826 4 VQEIPQK Unmodified 840.47052 0.47051757 411 O60547 GMDS GDP-mannose 4,6 dehydratase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By matching 8.5 3.12 3 13 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 16.846 16.293 2 0.02063 20083 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.66 67.628 392790000 22594000 128420000 931620 10214000 9283800 20244000 21710000 16630000 19331000 23177000 24551000 26513000 14841000 21489000 32859000 57838 411 51964 487493;487494;487495;487496;487497;487498;487499;487500;487501;487502;487503;487504;487505;487506;487507;487508 386830;386831;386832;386833;386834;386835;386836 386832 2 VQEKPDSPGGSTQIQR Unmodified 1725.8646 0.86457574 2295 Q13459 MYO9B Unconventional myosin-IXb yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 21.366 21.488 3 0.00044379 22503 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 56.768 43.631 51640000 0 0 0 5266400 5232600 9812400 4463300 0 3452900 7121900 9282500 0 0 0 7007800 57839 2295 51965 487509;487510;487511;487512;487513;487514;487515;487516;487517 386837;386838;386839;386840;386841 386837 5 VQELAPASGEK Unmodified 1127.5823 0.58225287 2434 Q14687 GSE1 Genetic suppressor element 1 yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.375 23.578 2 0.0048314 24862 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 60.518 50.931 85300000 0 0 0 4963800 4967500 6404000 5786300 5265600 5045800 7700100 7943100 8381000 9948600 6987300 11907000 57840 2434 51966 487518;487519;487520;487521;487522;487523;487524;487525;487526;487527;487528;487529 386842;386843;386844;386845;386846;386847;386848;386849 386846 3 VQELERELAQER Unmodified 1498.774 0.77396981 4311 Q9GZZ9 UBA5 Ubiquitin-like modifier-activating enzyme 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.444 45.614 3 1.5932E-09 50364 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 111.79 91.366 394060000 0 0 0 19197000 13687000 36367000 28663000 28171000 21190000 56814000 42266000 38271000 24063000 32174000 53202000 57841 4311 51967 487530;487531;487532;487533;487534;487535;487536;487537;487538;487539;487540;487541 386850;386851;386852;386853;386854;386855;386856;386857;386858;386859;386860;386861;386862 386857 12 VQELETSLAELR Unmodified 1386.7355 0.73545904 2156 Q08379 GOLGA2 Golgin subfamily A member 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.975 75.034 2 2.3589E-05 86500 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 91.549 55.216 99190000 0 0 0 3964900 5908900 6541100 6528500 6868100 5538500 8857600 8663400 14767000 9601500 7474900 14476000 57842 2156 51968 487542;487543;487544;487545;487546;487547;487548;487549;487550;487551;487552;487553 386863;386864;386865;386866;386867;386868;386869;386870;386871;386872;386873;386874 386869 12 VQELGHGCAALVTK Unmodified 1481.766 0.76604767 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 40.059 40.415 3 0.025752 44846 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 22.606 16.324 55907000 0 0 0 0 0 7604500 3187600 0 0 7835000 5562200 7164500 7657200 6880700 10016000 57843 5187 51969 487554;487555;487556;487557;487558;487559;487560;487561 386875 386875 1 VQELIQENVAK Unmodified 1269.6929 0.69286595 3183 Q86WG5 SBF2 Myotubularin-related protein 13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 46.823 46.999 2 0.0029345 52928 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 75.294 38.601 20786000 0 0 0 0 3098400 0 4094000 0 0 4675000 4952800 0 0 0 3965700 57844 3183 51970 487562;487563;487564;487565;487566;487567 386876;386877;386878;386879;386880;386881 386878 6 VQELPLAR Unmodified 924.53927 0.53926584 2359 Q13952 NFYC Nuclear transcription factor Y subunit gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 47.931 48.087 2 0.015851 53909 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 68.214 22.332 130380000 0 0 0 7225700 4954800 15070000 7949600 6883400 5930900 15961000 15234000 17554000 12364000 0 21249000 57845 2359 51971 487568;487569;487570;487571;487572;487573;487574;487575;487576;487577;487578 386882;386883;386884;386885;386886;386887;386888 386883 5 VQELQNLLK Unmodified 1083.6288 0.62880913 3151 Q86UP2 KTN1 Kinectin yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 74.954 70.648 2 0.0015975 88773 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.74 43.051 76813000 0 76813000 0 0 0 0 0 0 0 0 0 0 0 0 0 57846 3151 51972 487579;487580 386889 386889 1 VQELQSPPRASQVVK Unmodified 1664.921 0.9209684 216 O14795 UNC13B Protein unc-13 homolog B no no 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 47.229 41.408 3 0.038182 57468 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 25.024 14.17 19980000 16480000 0 3499400 0 0 0 0 0 0 0 0 0 0 0 0 57847 216 51973 487581;487582 386890 386890 1 VQELVSALER Unmodified 1142.6295 0.62953741 1162 P23508 MCC Colorectal mutant cancer protein yes yes 0 0 0 By MS/MS 2 0 1 1 91.339 86.429 2 0.0084193 107257 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.334 32.999 423790000 0 423790000 0 0 0 0 0 0 0 0 0 0 0 0 0 57848 1162 51974 487583 386891 386891 1 VQEMNYIQK Oxidation (M) 1167.5594 0.55940893 403 O60488 ACSL4 Long-chain-fatty-acid--CoA ligase 4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 18 1 2 1 1 2 2 2 2 1 2 1 1 24.517 24.705 2 0.0051664 24911 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.342 18.94 117670000 0 0 0 5993300 12911000 12739000 5506000 15052000 8511700 11732000 10572000 6824300 15526000 6733300 5563400 57849 403 51975 487584;487585;487586;487587;487588;487589;487590;487591;487592;487593;487594;487595;487596;487597;487598;487599;487600;487601 386892;386893;386894;386895;386896;386897;386898;386899;386900 386894 506 4 VQEMNYIQK Unmodified 1151.5645 0.56449431 403 O60488 ACSL4 Long-chain-fatty-acid--CoA ligase 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 38.613 38.013 2 0.0031591 42730 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 92.47 21.128 363430000 0 186530000 0 7290700 15609000 8943900 13234000 27618000 0 15591000 16011000 21870000 15161000 12057000 23510000 57850 403 51975 487602;487603;487604;487605;487606;487607;487608;487609;487610;487611;487612;487613;487614 386901;386902;386903;386904;386905;386906;386907;386908 386908 4 VQEMVESNEAK Oxidation (M) 1278.5762 0.57618121 2463 Q14C86 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 1 2 2 2 2 2 2 2 1 11.979 12.139 2 0.00147 10685 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 68.657 32.323 71556000 0 0 0 4877500 2875600 9391400 3093800 5764200 3811300 9733700 5412400 6871600 8828700 6674400 4221500 57851 2463 51976 487615;487616;487617;487618;487619;487620;487621;487622;487623;487624;487625;487626;487627;487628;487629;487630;487631;487632;487633;487634;487635;487636 386909;386910;386911;386912;386913;386914;386915;386916;386917;386918;386919;386920 386918 4056 11 VQEMVESNEAK Unmodified 1262.5813 0.58126659 2463 Q14C86 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.854 21.061 2 0.00029439 21380 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 103.26 84.161 169220000 0 0 0 8127700 8152500 13840000 12750000 9631600 7232500 18181000 20700000 16194000 15417000 12107000 26890000 57852 2463 51976 487637;487638;487639;487640;487641;487642;487643;487644;487645;487646;487647;487648 386921;386922;386923;386924;386925;386926;386927;386928;386929;386930;386931;386932;386933;386934 386932 14 VQENCIDLVGR Unmodified 1301.6398 0.63978452 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.617 52.761 2 1.9611E-05 59709 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 150.35 84.081 797090000 0 0 0 27252000 36174000 51046000 40193000 38570000 33527000 63640000 77568000 145530000 85148000 74569000 123880000 57853 516 51977 487649;487650;487651;487652;487653;487654;487655;487656;487657;487658;487659;487660 386935;386936;386937;386938;386939;386940;386941;386942;386943;386944;386945;386946 386942 11 VQENEDNLALIHAAR Unmodified 1691.8591 0.85909643 2660 Q2YD98 UVSSA UV-stimulated scaffold protein A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.325 55.43 3 0.00081704 63098 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 48.527 37.869 66010000 0 0 0 4106400 4365800 7068100 3851000 5051600 5231500 7069200 0 10339000 5355300 5232100 8339900 57854 2660 51978 487661;487662;487663;487664;487665;487666;487667;487668;487669;487670;487671;487672 386947;386948;386949;386950;386951;386952;386953;386954;386955;386956;386957;386958 386955 12 VQENSIQR Unmodified 972.49886 0.49885759 2923 Q6P1Q9 METTL2B Methyltransferase-like protein 2B no no 0 0 0 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 9.8319 9.9791 2 0.014823 9598 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 105.14 30.697 9956200 0 0 0 2831500 0 0 0 0 3253900 0 3870700 0 0 0 0 57855 2923 51979 487673;487674;487675;487676 386959;386960 386960 1 VQENSIQRVCQEK Unmodified 1616.7941 0.79405333 2923 Q6P1Q9 METTL2B Methyltransferase-like protein 2B no no 0 0 1 By MS/MS By MS/MS 2 0 4 2 2 28.98 25.23 2;3 1.7205E-13 32184 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 122.46 104.36 66832000 0 36668000 30164000 0 0 0 0 0 0 0 0 0 0 0 0 57856 2923 51980 487677;487678;487679;487680 386961;386962 386961 1 VQEQELTR Unmodified 1001.5142 0.5141733 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 17.592 17.78 2 0.0044044 17324 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 110.81 32.192 589990000 0 0 0 106170000 31316000 29035000 36551000 98372000 20381000 34502000 41630000 83504000 55262000 23086000 30183000 57857 1029 51981 487681;487682;487683;487684;487685;487686;487687;487688;487689;487690;487691;487692 386963;386964;386965;386966;386967;386968;386969;386970;386971;386972;386973;386974;386975 386973 11 VQEQLGNDVVEK Unmodified 1356.6885 0.68850885 272 O15305 PMM2 Phosphomannomutase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.8 3.92 2 3 1 1 1 1 1 39.26 37.195 2 2.0749E-24 47393 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 208.84 120.48 281220000 30106000 158510000 0 0 0 0 0 0 0 0 26823000 0 0 12468000 53316000 57858 272 51982 487693;487694;487695;487696;487697 386976;386977;386978;386979;386980;386981 386977 6 VQEQVHTLLSQDQAQAAR Unmodified 2021.029 0.029015303 2135 Q07065 CKAP4 Cytoskeleton-associated protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 48.635 48.98 3 1.0431E-26 55160 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 109.42 99.633 142050000 0 0 0 0 0 16614000 0 21935000 14195000 20346000 16568000 17500000 17072000 0 17815000 57859 2135 51983 487698;487699;487700;487701;487702;487703;487704;487705 386982;386983;386984;386985;386986;386987;386988;386989 386986 8 VQEQVMMTVK 2 Oxidation (M) 1223.589 0.5889945 2346 Q13835 PKP1 Plakophilin-1 yes yes 0 2 0 By MS/MS 10 0 1 1 19.842 20.007 2 0.012645 20230 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 40.352 27.298 4190600 0 0 0 0 0 0 0 4190600 0 0 0 0 0 0 0 57860 2346 51984 487706 386990 386990 3824;3825 1 VQEQVMMTVK Oxidation (M) 1207.5941 0.59407988 2346 Q13835 PKP1 Plakophilin-1 yes yes 0 1 0 By MS/MS 10 0 1 1 33.727 33.889 2 0.0043056 37098 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 64.654 22.545 6020600 0 0 0 0 0 0 0 6020600 0 0 0 0 0 0 0 57861 2346 51984 487707 386991 386991 3824;3825 1 VQERDKEPLQER Unmodified 1525.7849 0.78486885 3134 Q86TC9 MYPN Myopalladin yes yes 0 0 2 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 12.68 12.785 3 0.0074903 12253 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 93.206 73.367 81110000 0 0 0 8600800 8536500 7066200 7494000 7936800 4953300 11038000 8127900 0 10667000 6689900 0 57862 3134 51985 487708;487709;487710;487711;487712;487713;487714;487715;487716;487717 386992;386993;386994 386994 1 VQESADELQK Unmodified 1145.5564 0.55643205 2012 P84085 ARF5 ADP-ribosylation factor 5 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 19.632 19.822 2 0.00057034 20187 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 142.92 55.226 983500000 0 0 0 102130000 64004000 79797000 102810000 71487000 60502000 91330000 99791000 119110000 0 67755000 124780000 57863 2012 51986 487718;487719;487720;487721;487722;487723;487724;487725;487726;487727;487728 386995;386996;386997;386998;386999;387000;387001;387002 387001 6 VQESQKPPTLIPEPK Unmodified 1689.9301 0.93013611 2561 Q15652 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 53.475 53.318 3 0.031746 59908 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 28.58 17.107 32757000 0 0 0 4395800 4642300 0 6124100 5834400 0 11761000 0 0 0 0 0 57864 2561 51987 487729;487730;487731;487732;487733 387003 387003 1 VQESTQVLR Unmodified 1058.572 0.57202253 664 O95466 FMNL1 Formin-like protein 1 no no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.724 26.925 2 0.0031256 28529 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 91.069 32.254 130590000 0 0 0 10667000 7620000 11788000 8132900 8913700 6685600 13884000 15183000 14992000 10288000 10308000 12131000 57865 664 51988 487734;487735;487736;487737;487738;487739;487740;487741;487742;487743;487744;487745 387004;387005;387006;387007;387008;387009;387010;387011;387012;387013 387011 7 VQETGEIK Unmodified 902.47091 0.4709115 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 13.541 13.747 2 0.031953 11155 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.611 25.235 36285000 0 0 0 3541300 0 0 0 0 0 11933000 0 12222000 0 0 8589300 57866 3023 51989 487746;487747;487748;487749 387014;387015 387015 2 VQEVAELR Unmodified 942.51345 0.51344502 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 32.853 33.138 2 0.011386 35169 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.046 13.992 35394000 0 0 0 0 3804800 0 5887100 0 0 0 0 6895500 4970700 6437300 7398600 57867 1286 51990 487750;487751;487752;487753;487754;487755 387016;387017 387017 2 VQEVLLK Unmodified 827.51165 0.5116541 5206 Q9Y4L1 HYOU1 Hypoxia up-regulated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.514 40.692 2 0.049915 43784 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.301 4.6147 198500000 0 0 0 8445600 8382400 17877000 11509000 6517100 7995400 16387000 19905000 25475000 12338000 20548000 43120000 57868 5206 51991 487756;487757;487758;487759;487760;487761;487762;487763;487764;487765;487766;487767 387018 387018 1 VQEVQVVGVK Unmodified 1083.6288 0.62880913 3777 Q96CM8 ACSF2 Acyl-CoA synthetase family member 2, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 48.411 42.764 2 0.0021147 55907 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.57 42.322 35544000 0 35544000 0 0 0 0 0 0 0 0 0 0 0 0 0 57869 3777 51992 487768 387019;387020 387020 2 VQEYCYDNIHFMK Unmodified 1745.7542 0.75416235 5280 Q9Y6E2 BZW2 Basic leucine zipper and W2 domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 73.371 69.152 3 0.0011816 84264 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 59.306 52.247 30593000 0 20281000 10312000 0 0 0 0 0 0 0 0 0 0 0 0 57870 5280 51993 487769;487770 387021;387022;387023 387023 3 VQEYPTLK Unmodified 976.52295 0.52294707 3055 Q7L5Y9 MAEA Macrophage erythroblast attacher yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 39.649 38.793 2 0.0025317 49108 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.62 93.107 199420000 14702000 125140000 0 2934300 3549000 4717100 3586100 0 0 6308600 7651900 6279400 5571600 5909200 13068000 57871 3055 51994 487771;487772;487773;487774;487775;487776;487777;487778;487779;487780;487781;487782 387024;387025;387026;387027 387025 4 VQFGNENTK Unmodified 1035.4985 0.49852324 2786 Q5T8P6 RBM26 RNA-binding protein 26 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.137 20.338 2 2.5497E-05 20809 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 138.54 75.83 469700000 0 0 0 32800000 30149000 38556000 31197000 23746000 34457000 46412000 46332000 54784000 49076000 34779000 47414000 57872 2786 51995 487783;487784;487785;487786;487787;487788;487789;487790;487791;487792;487793;487794 387028;387029;387030;387031;387032;387033 387030 5 VQFGVMTR Unmodified 936.48512 0.48512178 230 O14964 HGS Hepatocyte growth factor-regulated tyrosine kinase substrate yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 51.648 51.949 2 0.017183 57529 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.073 39.277 29943000 0 0 0 0 2427100 0 0 0 0 0 6134800 8184100 0 4258800 8938100 57873 230 51996 487795;487796;487797;487798;487799;487800 387034;387035;387036 387035 3 VQFLEQQNK Unmodified 1132.5877 0.58767259 77 CON__P19013;P19013 KRT4 Keratin, type II cytoskeletal 4 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 39.367 39.636 2 0.00069849 44069 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 144.38 106.82 + 259180000 0 0 0 15560000 0 0 78368000 104060000 2365300 0 5728900 8177800 38673000 0 6254700 57874 77 51997 487801;487802;487803;487804;487805;487806;487807;487808 387037;387038;387039;387040 387039 3 VQFMYGEDPSNAMPVIFGK 2 Oxidation (M) 2160.986 0.98601278 3933 Q96N67 DOCK7 Dedicator of cytokinesis protein 7 yes yes 0 2 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 80.447 80.566 2 3.807E-06 93033 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 67.456 62.303 20985000 0 0 0 0 0 3715600 0 2545700 0 5730400 0 0 2171000 3372000 3450000 57875 3933 51998 487809;487810;487811;487812;487813;487814 387041;387042;387043 387041 5423;5424 3 VQGADFFGHVPPSASK Unmodified 1642.8104 0.81035532 3387 Q8NB78 KDM1B Lysine-specific histone demethylase 1B yes yes 0 0 0 By MS/MS 2 0 1 1 73.21 65.014 3 0.034367 86659 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 27.032 22.968 8289300 8289300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57876 3387 51999 487815 387044 387044 1 VQGAVSLQNGK Unmodified 1099.5986 0.59857163 4159 Q9BUB5 MKNK1 MAP kinase-interacting serine/threonine-protein kinase 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 26.919 23.263 2 0.00061203 30788 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.009 55.174 40278000 0 19516000 20762000 0 0 0 0 0 0 0 0 0 0 0 0 57877 4159 52000 487816;487817 387045 387045 1 VQGDYFETLLYK Unmodified 1474.7344 0.73439641 2841 Q658Y4 FAM91A1 Protein FAM91A1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 85.223 85.351 2 0.0072569 98607 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.353 24.415 18213000 0 0 0 0 0 2548400 0 0 0 4776300 3335300 0 0 0 7552500 57878 2841 52001 487818;487819;487820;487821 387046;387047;387048 387047 3 VQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVK Unmodified 3859.7607 0.76068992 112 Q13765;E9PAV3 NACA Nascent polypeptide-associated complex subunit alpha;Nascent polypeptide-associated complex subunit alpha, muscle-specific form yes no 0 0 0 By MS/MS 2 0 1 1 75.419 67.289 3 5.1306E-89 88879 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 103.99 95.152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57879 112 52002 487822 387049 387049 1 VQGETQPQR Unmodified 1041.5203 0.52032131 2427 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 2 1 1 1 2 1 1 2 2 1 1 6.8481 6.9495 2 0.0034522 4781 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 94.302 64.117 55858000 0 0 0 6884600 2444900 4558400 3643400 3885400 3987900 0 7176500 6361700 8727500 0 8187400 57880 2427 52003 487823;487824;487825;487826;487827;487828;487829;487830;487831;487832;487833;487834;487835;487836;487837 387050;387051;387052;387053;387054;387055;387056;387057;387058;387059;387060 387051 11 VQGGALEDSQLVAGVAFK Unmodified 1787.9418 0.94176342 4065 Q99832 CCT7 T-complex protein 1 subunit eta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.88 3.89 20 6 23 5 19 2 1 2 2 2 2 2 2 2 2 2 2 2 84.537 82.807 2;3 4.6682E-82 101476 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 193.11 167 2455600000 88812000 1943400000 140150000 2864000 10829000 32101000 7787500 12896000 18637000 53439000 30704000 27129000 9419200 20189000 57259000 57881 4065 52004 487838;487839;487840;487841;487842;487843;487844;487845;487846;487847;487848;487849;487850;487851;487852;487853;487854;487855;487856;487857;487858;487859;487860;487861;487862;487863;487864;487865;487866;487867;487868;487869;487870;487871;487872;487873;487874;487875;487876;487877;487878;487879;487880;487881;487882;487883;487884;487885;487886 387061;387062;387063;387064;387065;387066;387067;387068;387069;387070;387071;387072;387073;387074;387075;387076;387077;387078;387079;387080;387081;387082;387083;387084;387085;387086;387087;387088;387089;387090;387091;387092;387093;387094;387095;387096;387097;387098;387099 387065 35 VQGGALEDSQLVAGVAFKK Unmodified 1916.0367 0.036726442 4065 Q99832 CCT7 T-complex protein 1 subunit eta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 77.787 76.247 3 1.3751E-72 97200 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 132.79 122.73 363340000 70482000 56186000 19162000 4798600 10322000 8863900 10326000 25242000 11012000 26308000 25088000 23636000 11942000 12808000 47165000 57882 4065 52005 487887;487888;487889;487890;487891;487892;487893;487894;487895;487896;487897;487898;487899;487900;487901;487902;487903 387100;387101;387102;387103;387104;387105;387106;387107;387108;387109;387110;387111;387112;387113;387114 387108 15 VQGLEQAVDNFEGK Unmodified 1532.7471 0.74708636 694 O95817 BAG3 BAG family molecular chaperone regulator 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 4 2 12 1 4 1 1 1 1 1 1 1 1 1 1 1 1 1 75.251 73.774 2;3 4.8099E-14 88412 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 138.99 120.21 773810000 9595800 512970000 7760400 7043300 10273000 26105000 11757000 11143000 12446000 18559000 21433000 32652000 12644000 29590000 49833000 57883 694 52006 487904;487905;487906;487907;487908;487909;487910;487911;487912;487913;487914;487915;487916;487917;487918;487919;487920;487921 387115;387116;387117;387118;387119;387120;387121;387122;387123;387124;387125;387126;387127;387128;387129;387130;387131 387121 13 VQGLLEEEAAAR Unmodified 1284.6674 0.66737948 2968 Q6SPF0 SAMD1 Atherin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.363 52.507 2 2.4706E-05 59491 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 110.39 87.068 146390000 0 0 0 7993600 9871400 10475000 8918000 8647700 7264700 16592000 14787000 18728000 14273000 11890000 16948000 57884 2968 52007 487922;487923;487924;487925;487926;487927;487928;487929;487930;487931;487932;487933 387132;387133;387134;387135;387136;387137;387138;387139;387140;387141;387142;387143 387133 11 VQGLLENGDSVTSPEK Unmodified 1671.8315 0.83154427 1436 P41229 KDM5C Lysine-specific demethylase 5C yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 58.425 53.086 2 0.0020243 68020 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.492 63.466 39593000 0 39593000 0 0 0 0 0 0 0 0 0 0 0 0 0 57885 1436 52008 487934;487935 387144 387144 1 VQGLLVPMK Unmodified 983.58377 0.58377319 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68.83 67.967 2 0.0035959 78295 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 89.55 58.938 264370000 55419000 76049000 0 7460000 6959100 10038000 8605700 13555000 5967700 10610000 10572000 14225000 10587000 11834000 22492000 57886 1364 52009 487936;487937;487938;487939;487940;487941;487942;487943;487944;487945;487946;487947;487948;487949 387145;387146;387147;387148;387149;387150;387151;387152;387153;387154;387155;387156;387157;387158;387159 387158 15 VQGLLVPMK Oxidation (M) 999.57869 0.57868781 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 51.513 51.533 2 0.038595 58197 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 40.098 6.3015 59505000 0 0 0 6836400 7245900 0 7021400 10676000 5432200 0 0 14821000 0 7472700 0 57887 1364 52009 487950;487951;487952;487953;487954;487955;487956 387160 387160 1 VQGRSEAGAGPGPK Unmodified 1309.6739 0.67386184 4299 Q9GZP8 IMUP Immortalization up-regulated protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 6 2 3 3 2 8.9731 5.7661 2;3 7.4993E-29 8448 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 143.42 115.22 5189300000 3634900000 767990000 786390000 0 0 0 0 0 0 0 0 0 0 0 0 57888 4299 52010 487957;487958;487959;487960;487961;487962;487963;487964 387161;387162;387163;387164;387165;387166;387167;387168;387169;387170 387161 9 VQGSDSDEEVVVATTR Unmodified 1690.801 0.80097243 1210 P26640 VARS Valine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 1 2 1 1 1 2 2 1 1 1 2 44.923 45.14 2;3 1.7978E-27 49434 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 157.52 122.82 328850000 0 0 0 13808000 11837000 35811000 15112000 16120000 8745800 35659000 33005000 41517000 21008000 21755000 74474000 57889 1210 52011 487965;487966;487967;487968;487969;487970;487971;487972;487973;487974;487975;487976;487977;487978;487979;487980 387171;387172;387173;387174;387175;387176;387177;387178;387179;387180;387181;387182;387183;387184;387185 387175 15 VQGSDSDEEVVVATTRIETMLGDVAVAVHPK Unmodified 3251.6344 0.63437138 1210 P26640 VARS Valine--tRNA ligase yes yes 0 0 1 By MS/MS By MS/MS 2 0.632 1 3 1 3 2 103.14 99.312 3;4 1.6772E-26 95996 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 83.557 78.748 161530000 145420000 16111000 0 0 0 0 0 0 0 0 0 0 0 0 0 57890 1210 52012 487981;487982;487983;487984;487985 387186;387187;387188;387189;387190 387188 5 VQHASPAGTYAHTVNR Unmodified 1707.8441 0.84411507 803 P05187;P09923 ALPP;ALPI Alkaline phosphatase, placental type;Intestinal-type alkaline phosphatase yes no 0 0 0 By MS/MS 10 0 1 1 21.504 21.834 3 0.029581 21633 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 51.888 39.742 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57891 803 52013 487986 387191 387191 1 VQHQTSSTSPLSSPNQTSSEPRPLPAPR Unmodified 2985.4904 0.49042475 3187 Q86X10 RALGAPB Ral GTPase-activating protein subunit beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 48.138 48.362 4 6.8701E-06 53332 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 34.04 27.464 83844000 0 0 0 0 6625000 7957100 7224400 9782700 0 0 0 17332000 10442000 9473100 15009000 57892 3187 52014 487987;487988;487989;487990;487991;487992;487993;487994 387192;387193;387194 387192 3 VQHRPSGLIMAR Unmodified 1363.7507 0.75067237 1373 P36507 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 31.115 31.521 3 0.0030643 33447 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.175 57.175 101040000 0 0 0 0 0 21997000 0 0 0 19565000 16839000 17218000 0 0 25416000 57893 1373 52015 487995;487996;487997;487998;487999 387195;387196;387197;387198 387198 4 VQIAANEETQEREEQMK Unmodified 2031.9531 0.95313275 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 36.799 35.852 3 5.4006E-87 46151 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 196.64 183.6 485050000 23226000 233390000 0 4648000 7691100 9944000 8532400 8233400 10125000 16593000 33548000 24277000 15908000 26663000 62275000 57894 1564 52016 488000;488001;488002;488003;488004;488005;488006;488007;488008;488009;488010;488011;488012;488013;488014 387199;387200;387201;387202;387203;387204;387205;387206;387207;387208;387209;387210;387211;387212;387213;387214 387202 16 VQIAANEETQEREEQMK Oxidation (M) 2047.948 0.94804737 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 31.538 26.922 3 0.0067225 37224 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.962 31.213 37783000 26964000 0 10819000 0 0 0 0 0 0 0 0 0 0 0 0 57895 1564 52016 488015;488016 387215;387216 387215 2490 2 VQIAEAINLQDK Unmodified 1340.73 0.72997974 2463 Q14C86 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.83 3.67 3 1 2 1 2 1 1 1 71.712 68.21 2 0.00013229 86273 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.17 72.381 384630000 11767000 356980000 4415100 0 0 5353600 0 0 0 6115500 0 0 0 0 0 57896 2463 52017 488017;488018;488019;488020;488021;488022 387217;387218;387219;387220;387221;387222;387223 387219 7 VQIAVANAQELLQR Unmodified 1551.8733 0.87328993 5239 Q9Y5L4 TIMM13 Mitochondrial import inner membrane translocase subunit Tim13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 80.074 80.253 2 3.0889E-05 92377 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 108.35 93.376 28399000 0 0 0 0 0 0 0 0 0 0 7764200 0 0 6600700 14034000 57897 5239 52018 488023;488024;488025;488026 387224;387225;387226;387227 387224 4 VQIDTFK Unmodified 849.45962 0.45961853 2192 Q12800;Q9NZI6 TFCP2;TFCP2L1 Alpha-globin transcription factor CP2;Transcription factor CP2-like protein 1 yes no 0 0 0 By matching By matching By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 42.716 42.904 2 0.023849 46988 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 100.74 28.721 201860000 0 0 0 4760900 6960500 0 14447000 10543000 11463000 19776000 26922000 20141000 21923000 20240000 44687000 57898 2192 52019 488027;488028;488029;488030;488031;488032;488033;488034;488035;488036;488037 387228 387228 1 VQIEHISSLIK Unmodified 1265.7343 0.73433683 129 O00231 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 1 2 2 2 2 2 2 67.143 67.223 2;3 0.00027649 76204 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 120.06 73.6 408920000 0 0 0 16813000 16995000 39414000 11982000 14336000 7248000 52496000 72966000 80409000 12145000 19437000 64681000 57899 129 52020 488038;488039;488040;488041;488042;488043;488044;488045;488046;488047;488048;488049;488050;488051;488052;488053;488054;488055;488056;488057;488058;488059;488060 387229;387230;387231;387232;387233;387234;387235;387236;387237;387238 387234 2 VQIFDLMDAK Unmodified 1178.6005 0.60054547 3508 Q8TDX7 NEK7 Serine/threonine-protein kinase Nek7 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 85.697 84.941 2 0.0039295 106107 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.051 71.426 160570000 0 87684000 3220000 0 4733800 9737200 0 0 0 10652000 7846800 7838900 0 7401200 21453000 57900 3508 52021 488061;488062;488063;488064;488065;488066;488067;488068;488069 387239;387240;387241;387242 387241 4 VQIFDLMDAK Oxidation (M) 1194.5955 0.59546009 3508 Q8TDX7 NEK7 Serine/threonine-protein kinase Nek7 yes yes 0 1 0 By MS/MS 2 0 1 1 79.344 74.609 2 0.045825 92628 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 51.268 40.633 39792000 0 39792000 0 0 0 0 0 0 0 0 0 0 0 0 0 57901 3508 52021 488070 387243 387243 1 VQIFEYNENTRK Unmodified 1539.7682 0.76815616 3809 Q96EE3 SEH1L Nucleoporin SEH1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 56.464 50.411 3 0.010568 62784 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 53.252 40.115 101770000 92350000 0 9418300 0 0 0 0 0 0 0 0 0 0 0 0 57902 3809 52022 488071;488072 387244;387245 387245 1 VQINDKDDTNEYK Unmodified 1580.7318 0.73183023 2144 Q07889 SOS1 Son of sevenless homolog 1 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 27.551 23.29 3 0.0052114 29047 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 48.704 42.984 25172000 0 25172000 0 0 0 0 0 0 0 0 0 0 0 0 0 57903 2144 52023 488073;488074 387246;387247 387247 2 VQIPIMLVGNK Oxidation (M) 1226.7057 0.70567924 2524 Q15382 RHEB GTP-binding protein Rheb yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 78.701 78.734 2 0.0034993 90863 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 59.35 47.756 128200000 0 0 0 8959200 5618600 16253000 10651000 0 14934000 15863000 10272000 0 13278000 10237000 22137000 57904 2524 52024 488075;488076;488077;488078;488079;488080;488081;488082;488083;488084 387248;387249;387250;387251;387252;387253 387248 4160 4 VQIPIMLVGNK Unmodified 1210.7108 0.71076462 2524 Q15382 RHEB GTP-binding protein Rheb yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 85.324 84.199 2 0.00052963 97232 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 102.51 78.292 83444000 6195200 11411000 0 1991500 0 10144000 0 4549100 0 6773800 6266100 6818900 3040300 4807200 21447000 57905 2524 52024 488085;488086;488087;488088;488089;488090;488091;488092;488093;488094;488095 387254;387255;387256;387257;387258;387259;387260;387261;387262 387257 9 VQIPIMLVGNKK Oxidation (M) 1354.8006 0.80064226 2524 Q15382 RHEB GTP-binding protein Rheb yes yes 0 1 1 By MS/MS 2 0 1 1 78.997 70.867 3 0.0018607 93129 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.55 50.961 13749000 13749000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57906 2524 52025 488096 387263 387263 4160 1 VQIPIMLVGNKK Unmodified 1338.8057 0.80572764 2524 Q15382 RHEB GTP-binding protein Rheb yes yes 0 0 1 By MS/MS 2 0 1 1 84.944 76.813 3 0.028434 100294 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 28.283 27.438 14577000 14577000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57907 2524 52025 488097 387264 387264 1 VQIQESVR Unmodified 957.52434 0.52434406 388 O60256 PRPSAP2 Phosphoribosyl pyrophosphate synthase-associated protein 2 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 28.69 28.934 2 0.0082561 30744 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 86.833 36.706 69979000 0 0 0 0 3463500 7993600 5843700 0 4680100 0 10606000 10973000 0 8188600 18230000 57908 388 52026 488098;488099;488100;488101;488102;488103;488104;488105 387265;387266;387267;387268;387269;387270 387270 3 VQISPDSGGLPER Unmodified 1353.6888 0.6888432 3690 Q92945 KHSRP Far upstream element-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 50.953 50.321 2 0.00096611 57564 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 68.069 40.327 2662100000 0 150160000 0 135180000 121180000 146400000 175740000 143080000 141290000 191070000 284140000 292410000 211330000 218780000 451350000 57909 3690 52027 488106;488107;488108;488109;488110;488111;488112;488113;488114;488115;488116;488117;488118;488119 387271;387272;387273;387274;387275;387276;387277;387278;387279;387280 387279 8 VQISPDSGGLPERSVSLTGAPESVQK Unmodified 2637.361 0.36097371 3690 Q92945 KHSRP Far upstream element-binding protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 76.525 71.253 3 1.6498E-107 90023 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 149.07 144.98 1301400000 100140000 938250000 263020000 0 0 0 0 0 0 0 0 0 0 0 0 57910 3690 52028 488120;488121;488122 387281;387282;387283;387284 387281 4 VQISQLHQEIQR Unmodified 1477.8001 0.80012499 100 CON__Q7RTT2;CON__Q8N1N4-2;Q8N1N4 KRT78 Keratin, type II cytoskeletal 78 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 47.621 47.784 2;3 7.5564E-269 53992 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 285.13 229.56 + 1977600000 0 0 0 396220000 88770000 134450000 92561000 374440000 89477000 167490000 118290000 217540000 152320000 80904000 65158000 57911 100 52029 488123;488124;488125;488126;488127;488128;488129;488130;488131;488132;488133;488134;488135;488136;488137;488138;488139;488140;488141;488142;488143;488144;488145;488146 387285;387286;387287;387288;387289;387290;387291;387292;387293;387294;387295;387296;387297;387298;387299;387300;387301;387302;387303;387304;387305;387306;387307;387308 387299 15 VQIYHNPTANSFR Unmodified 1545.7688 0.76882486 1629 P50552 VASP Vasodilator-stimulated phosphoprotein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 2 2 2 1 1 2 2 1 1 1 2 46.737 46.906 2;3 0.0011818 52662 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 66.708 58.332 329940000 0 0 0 17435000 19165000 25173000 26386000 19023000 14798000 36530000 38957000 36283000 22149000 21952000 52088000 57912 1629 52030 488147;488148;488149;488150;488151;488152;488153;488154;488155;488156;488157;488158;488159;488160;488161;488162;488163;488164 387309;387310;387311;387312;387313;387314;387315;387316;387317;387318;387319;387320;387321;387322 387310 9 VQLANQIYDLVDR Unmodified 1545.8151 0.81510635 4732 Q9NXR8 ING3 Inhibitor of growth protein 3 yes yes 0 0 0 By MS/MS 10 0 1 1 82.753 82.852 2 0.031283 95957 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 34.532 7.4174 1947700 0 0 0 0 0 0 0 0 0 1947700 0 0 0 0 0 57913 4732 52031 488165 387323 387323 1 VQLDCIVVGIPPPQVR Unmodified 1788.992 0.99202486 3134 Q86TC9 MYPN Myopalladin yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 87.461 87.578 2 0.0098703 101229 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.741 37.208 3814400 0 0 0 0 0 0 0 0 0 0 0 0 966990 0 2847400 57914 3134 52032 488166;488167 387324 387324 1 VQLDLAETDLSQGVAR Unmodified 1713.8897 0.88972785 4128 Q9BSJ8 ESYT1 Extended synaptotagmin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.038 78.098 2 8.3419E-28 89982 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 168.02 120.12 179870000 0 0 0 5553300 12175000 15464000 12056000 12477000 11787000 21123000 19838000 25242000 12401000 15456000 16297000 57915 4128 52033 488168;488169;488170;488171;488172;488173;488174;488175;488176;488177;488178;488179 387325;387326;387327;387328;387329;387330;387331;387332;387333;387334;387335;387336;387337 387327 13 VQLDTIQGELNAPTQFK Unmodified 1900.9894 0.9894419 3081 Q7Z3B4 NUP54 Nucleoporin p54 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.321 80.38 2 1.3338E-45 93023 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 151.66 112.4 120680000 0 0 0 1900200 6487800 7328800 6813700 10025000 8468500 11428000 11549000 14394000 9249100 15056000 17980000 57916 3081 52034 488180;488181;488182;488183;488184;488185;488186;488187;488188;488189;488190;488191 387338;387339;387340;387341;387342;387343;387344;387345;387346;387347;387348 387338 10 VQLEERVVK Unmodified 1098.6397 0.63970816 4634 Q9NTJ3 SMC4 Structural maintenance of chromosomes protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 38.487 33.593 2 0.0066808 41994 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 140.35 87.187 124640000 24767000 48082000 51789000 0 0 0 0 0 0 0 0 0 0 0 0 57917 4634 52035 488192;488193;488194;488195 387349;387350 387350 0 VQLEHVQTR Unmodified 1108.5989 0.59890598 463 O75150 RNF40 E3 ubiquitin-protein ligase BRE1B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.972 22.179 2 0.0052698 21971 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 78.334 35.47 85872000 0 0 0 5369000 2790800 5476100 5851300 4436500 4847700 8843800 7637200 9464500 11453000 7661900 12040000 57918 463 52036 488196;488197;488198;488199;488200;488201;488202;488203;488204;488205;488206;488207 387351;387352;387353;387354;387355;387356;387357;387358;387359 387357 9 VQLETIIK Unmodified 942.57498 0.57498264 4836 Q9UBC2 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.288 64.38 2 0.011003 73682 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 77.923 36.62 83937000 0 0 0 3477100 4250600 5485000 5816900 5140200 4579300 7610000 8321100 9654400 6868000 7082500 15652000 57919 4836 52037 488208;488209;488210;488211;488212;488213;488214;488215;488216;488217;488218;488219 387360;387361 387360 2 VQLFEDPTVDK Unmodified 1289.6503 0.65033243 1676 P51948 MNAT1 CDK-activating kinase assembly factor MAT1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 65.901 66.072 2 0.042497 75751 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 50.372 36.654 15452000 0 0 0 0 0 0 3479000 3195000 2749600 0 0 0 0 6028800 0 57920 1676 52038 488220;488221;488222;488223 387362;387363 387363 2 VQLGDQTDSK Unmodified 1089.5302 0.53021729 4641 Q9NU22 MDN1 Midasin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 16.908 17.115 2 0.0016114 16713 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 89.886 53.491 34251000 0 0 0 0 0 0 3997700 4568400 6650600 4778200 0 10080000 0 4176200 0 57921 4641 52039 488224;488225;488226;488227;488228;488229;488230;488231;488232 387364;387365;387366;387367;387368;387369;387370;387371 387371 8 VQLISGPPAK Unmodified 1008.5968 0.59678072 28 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.77 47.932 2 0.034153 52784 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.876 25.336 85172000 0 0 0 3611400 3170900 9208200 4658100 5120500 2829400 11677000 8622500 7979600 6774600 6195600 15325000 57922 28 52040 488233;488234;488235;488236;488237;488238;488239;488240;488241;488242;488243;488244 387372 387372 1 VQLLSQYDNEK Unmodified 1335.667 0.66704513 664 O95466 FMNL1 Formin-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.12 3.72 2 1 5 1 2 1 1 1 1 1 54.877 52.512 2 0.00043138 59966 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 85.533 49.589 155670000 6143900 46234000 0 8847800 8878600 0 10391000 0 0 0 32014000 0 0 0 43162000 57923 664 52041 488245;488246;488247;488248;488249;488250;488251;488252 387373;387374;387375;387376;387377;387378 387373 6 VQLMAAEK Unmodified 888.47389 0.47388839 2816 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 32.643 32.764 2 0.025559 34474 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.596 19.378 122980000 0 0 0 14350000 13354000 13279000 12521000 13673000 8059800 15319000 0 15822000 0 0 16605000 57924 2816 52042 488253;488254;488255;488256;488257;488258;488259;488260;488261 387379;387380;387381 387379 3 VQLMAAER Unmodified 916.48004 0.4800364 463 O75150 RNF40 E3 ubiquitin-protein ligase BRE1B yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 35.951 35.956 2 0.033014 39516 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 53.968 15.597 12851000 0 0 0 0 3997100 0 0 0 3253200 0 0 0 5600800 0 0 57925 463 52043 488262;488263;488264 387382 387382 1 VQLNVFDEQGEEDSYDLK Unmodified 2126.9644 0.96440894 417 O60610 DIAPH1 Protein diaphanous homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 79.897 79.909 2 1.5668E-32 92396 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 143.86 138.2 44154000 0 0 0 1998700 5763900 5812900 2132900 0 2945300 8821500 9476100 7202700 0 0 0 57926 417 52044 488265;488266;488267;488268;488269;488270;488271;488272;488273 387383;387384;387385;387386;387387;387388;387389 387384 7 VQLPAYLK Unmodified 930.55385 0.55385327 3349 Q8N5K1 CISD2 CDGSH iron-sulfur domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.193 67.275 2 0.010188 76866 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 80.462 50.621 72676000 0 0 0 4202600 4818400 4693900 5226600 7240300 4829900 6256600 6656200 9503000 6226200 6340300 6681500 57927 3349 52045 488274;488275;488276;488277;488278;488279;488280;488281;488282;488283;488284;488285 387390;387391;387392;387393;387394 387394 5 VQLPQPLVEK Unmodified 1149.6758 0.67575932 5174 Q9Y3S1 WNK2 Serine/threonine-protein kinase WNK2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 67.391 67.659 2 0.046806 76818 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 38.086 16 15775000 0 0 0 0 0 0 0 2426400 0 0 2751500 0 3457800 2668900 4470000 57928 5174 52046 488286;488287;488288;488289;488290 387395 387395 1 VQLSGPQEAEK Unmodified 1184.6037 0.60371659 5042 Q9UNS2 COPS3 COP9 signalosome complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.727 28.922 2 0.00031555 31481 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 101.65 53.798 444440000 0 0 0 23078000 16269000 44025000 20918000 23237000 17149000 51634000 58253000 31420000 41991000 43396000 73071000 57929 5042 52047 488291;488292;488293;488294;488295;488296;488297;488298;488299;488300;488301;488302 387396;387397;387398;387399;387400;387401;387402;387403;387404;387405 387397 9 VQLSLLQTELK Unmodified 1270.7497 0.74965254 672 O95613 PCNT Pericentrin yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 85.545 81.92 2 0.0014754 101954 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.496 51.02 19078000 0 18403000 674640 0 0 0 0 0 0 0 0 0 0 0 0 57930 672 52048 488303;488304 387406 387406 1 VQLTPGQTEVK Unmodified 1198.6558 0.65575216 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 40.425 38.813 2 0.00054559 49092 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.013 35.448 477460000 23065000 378330000 0 0 6545300 0 10475000 12991000 6929600 10321000 0 0 14561000 14242000 0 57931 2775 52049 488305;488306;488307;488308;488309;488310;488311;488312;488313;488314;488315;488316;488317 387407;387408;387409;387410;387411;387412;387413;387414;387415;387416;387417;387418;387419 387409 13 VQLTYLPHGCPK Unmodified 1411.7282 0.7282056 317 O43314 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 yes yes 0 0 0 By MS/MS 2 0 1 1 64.402 56.123 3 0.015096 75557 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.252 38.419 8923700 8923700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57932 317 52050 488318 387420 387420 0 VQLVGLDEESSEFICR Unmodified 1879.8986 0.89857798 1864 P61962 DCAF7 DDB1- and CUL4-associated factor 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 82.48 82.658 2 0.03109 95757 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 29.936 16.273 12901000 0 0 0 0 0 0 0 3196900 0 0 5271900 4432500 0 0 0 57933 1864 52051 488319;488320;488321 387421;387422 387421 2 VQLVSVMK Oxidation (M) 918.52084 0.52083858 4833 Q9UBB6 NCDN Neurochondrin yes yes 0 1 0 By MS/MS 2 0 1 1 46.044 39.052 2 0.018735 53517 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.498 48.88 18230000 18230000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57934 4833 52052 488322 387423;387424;387425 387424 6205 3 VQLVVGDGR Unmodified 941.52943 0.52942943 1133 P22061 PCMT1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 41.497 41.724 2 0.0030099 46901 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 126.62 73.067 272670000 0 0 0 18481000 0 22897000 17576000 17149000 10807000 23978000 34276000 35830000 0 29565000 62112000 57935 1133 52053 488323;488324;488325;488326;488327;488328;488329;488330;488331;488332 387426;387427;387428;387429;387430 387426 3 VQLYELK Unmodified 891.50657 0.50656873 2815 Q5VTL8 PRPF38B Pre-mRNA-splicing factor 38B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 53.91 54.131 2 0.034409 61750 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 71.296 7.0594 170090000 0 0 0 0 0 0 25516000 23128000 0 0 121440000 0 0 0 0 57936 2815 52054 488333;488334;488335 387431;387432;387433 387433 3 VQMEELSK Oxidation (M) 978.4692 0.46919694 2501 Q15149 PLEC Plectin yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 13.589 13.615 2 0.014106 13310 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 61.999 24.979 13203000 0 0 0 4514000 0 2532200 2247000 1782700 2127400 0 0 0 0 0 0 57937 2501 52055 488336;488337;488338;488339;488340 387434;387435;387436 387434 4108 3 VQMEELSK Unmodified 962.47428 0.47428232 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 31.233 31.375 2 0.010711 34728 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 78.77 37.543 97001000 0 0 0 10189000 8316100 9193900 8697300 7755100 5193700 9555800 11869000 0 8366100 7775700 10089000 57938 2501 52055 488341;488342;488343;488344;488345;488346;488347;488348;488349;488350;488351 387437;387438;387439 387439 3 VQMPSFK Unmodified 835.42621 0.42620992 3226 Q8IVF2 AHNAK2 Protein AHNAK2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 54.566 53.107 2 0.017319 59174 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 114.19 77.629 154000000 23646000 23909000 0 4944200 4234000 0 0 7203300 0 0 23218000 22300000 0 20225000 24325000 57939 3226 52056 488352;488353;488354;488355;488356;488357;488358;488359;488360;488361;488362 387440;387441;387442;387443 387443 4 VQMTSPSSTGSPMFK Oxidation (M) 1599.7273 0.7272789 1600 P49790 NUP153 Nuclear pore complex protein Nup153 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.3 2.25 2 21 2 2 1 1 2 1 1 3 1 2 2 3 2 46.607 46.272 2 1.0119E-30 55181 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.56 113.89 142890000 0 41982000 0 6225500 3014900 3965900 8237100 4519300 2611200 10057000 6926300 14240000 11991000 16305000 12813000 57940 1600 52057 488363;488364;488365;488366;488367;488368;488369;488370;488371;488372;488373;488374;488375;488376;488377;488378;488379;488380;488381;488382;488383;488384;488385 387444;387445;387446;387447;387448;387449;387450;387451;387452;387453;387454;387455;387456;387457;387458;387459 387447 2576;2577 16 VQMTSPSSTGSPMFK Unmodified 1583.7324 0.73236428 1600 P49790 NUP153 Nuclear pore complex protein Nup153 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 57.624 57.694 2 7.2393E-11 64737 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 111.63 85.116 54249000 0 0 0 0 11720000 0 7835800 11313000 0 0 11338000 0 0 12043000 0 57941 1600 52057 488386;488387;488388;488389;488390;488391;488392;488393;488394 387460;387461;387462;387463;387464;387465;387466;387467;387468 387464 9 VQMTSPSSTGSPMFK 2 Oxidation (M) 1615.7222 0.72219352 1600 P49790 NUP153 Nuclear pore complex protein Nup153 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 33.626 32.268 2 0.0015902 36006 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 54.776 48.672 20072000 0 12967000 0 0 0 0 2544000 0 0 0 0 4561100 0 0 0 57942 1600 52057 488395;488396;488397 387469;387470;387471 387471 2576;2577 1 VQNIHPVESAK Unmodified 1220.6513 0.65133548 1992 P80303 NUCB2 Nucleobindin-2;Nesfatin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 6 2 2 4 2 22.985 19.058 2;3 8.4084E-29 24030 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 198.62 128.67 560590000 180000000 261020000 119570000 0 0 0 0 0 0 0 0 0 0 0 0 57943 1992 52058 488398;488399;488400;488401;488402;488403;488404;488405 387472;387473;387474;387475;387476;387477;387478;387479 387477 4 VQNNLYHHCVINK Unmodified 1637.8096 0.80964381 2184 Q12769 NUP160 Nuclear pore complex protein Nup160 yes yes 0 0 0 By MS/MS 2 0 1 1 36.501 30.072 3 0.00072882 42032 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.692 64.26 20804000 20804000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57944 2184 52059 488406 387480 387480 1 VQNTSLEAIVQNASSDNQGIQLSAVQAAR Unmodified 3011.5272 0.52720419 173 O00629 KPNA4 Importin subunit alpha-3 yes yes 0 0 0 By MS/MS 10 0 1 1 87.497 87.605 3 1.3222E-11 101637 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 45.957 40.827 3136800 0 0 0 0 0 0 0 0 0 3136800 0 0 0 0 0 57945 173 52060 488407 387481 387481 1 VQPEAQAK Unmodified 869.46068 0.46068117 2127 Q06323 PSME1 Proteasome activator complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 6.5197 6.6396 2 0.022888 4492 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 60.788 16.096 27008000 0 0 0 1283900 1569700 5135300 3123400 2842900 0 1974800 2566100 2479100 1323600 1088400 3620700 57946 2127 52061 488408;488409;488410;488411;488412;488413;488414;488415;488416;488417;488418 387482;387483;387484 387483 3 VQPEPEPEPGLLLEVEEPGTEEER Unmodified 2701.297 0.29703605 3296 Q8IZL8 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 1 1 2 1 2 2 2 2 86.329 86.434 2;3 3.0171E-11 100060 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 65.753 53.625 85473000 0 0 0 0 4887900 5545300 0 5804900 4845000 10334000 6842300 12079000 7640000 8849100 18645000 57947 3296 52062 488419;488420;488421;488422;488423;488424;488425;488426;488427;488428;488429;488430;488431;488432;488433 387485;387486;387487;387488;387489;387490;387491;387492;387493;387494;387495;387496;387497;387498;387499;387500;387501 387486 17 VQPFHQGRPLPASGK Unmodified 1617.874 0.87395863 4406 Q9H568 ACTL8 Actin-like protein 8 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 32.026 32.204 3 0.0082225 35380 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 36.638 23.76 55716000 0 0 0 4468300 4514600 5676000 4902800 3410700 3170200 0 7687700 8241400 5737800 0 7906200 57948 4406 52063 488434;488435;488436;488437;488438;488439;488440;488441;488442;488443 387502;387503;387504;387505;387506 387502 4 VQPGDRVNVTGIYR Unmodified 1572.8372 0.83723877 1332 P33991 MCM4 DNA replication licensing factor MCM4 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 51.077 51.144 3 0.0020249 56858 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 49.298 35.118 148130000 0 0 0 11414000 5403400 13392000 14185000 10190000 9889700 20315000 0 0 12137000 14305000 36898000 57949 1332 52064 488444;488445;488446;488447;488448;488449;488450;488451;488452;488453;488454 387507;387508;387509;387510;387511;387512 387511 5 VQPGYPVVPAEK Unmodified 1282.6921 0.69213767 3649 Q92667 AKAP1 A-kinase anchor protein 1, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 56.812 50.99 2 0.0070813 65953 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.893 47.991 12094000 0 12094000 0 0 0 0 0 0 0 0 0 0 0 0 0 57950 3649 52065 488455 387513 387513 1 VQPNEAVYTK Unmodified 1147.5873 0.58733824 947 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 27.037 26.883 2 0.0017577 28733 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 95.358 72.287 859330000 0 44576000 0 20437000 31944000 64116000 57310000 40484000 39683000 45589000 121820000 76586000 38586000 91656000 186540000 57951 947 52066 488456;488457;488458;488459;488460;488461;488462;488463;488464;488465;488466;488467;488468 387514;387515;387516;387517;387518;387519;387520;387521;387522;387523;387524;387525;387526;387527;387528;387529;387530 387526 17 VQPPDADPVEIENR Unmodified 1577.7686 0.76855009 4347 Q9H1D9 POLR3F DNA-directed RNA polymerase III subunit RPC6 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 56.461 56.43 2 0.011323 63812 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 49.5 34.81 26039000 0 0 0 2489200 2723500 4007800 3823900 0 0 0 0 0 3184400 0 9810300 57952 4347 52067 488469;488470;488471;488472;488473;488474;488475 387531;387532 387532 2 VQPPPETPAEEEMETETEAEALQEK Oxidation (M) 2827.2593 0.25932991 3296 Q8IZL8 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 72.461 72.627 3 6.4095E-19 83350 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.389 70.233 58759000 0 0 0 0 0 8655900 0 0 0 6059300 0 12872000 9595800 8903000 12674000 57953 3296 52068 488476;488477;488478;488479;488480;488481 387533;387534;387535;387536;387537 387534 4896 5 VQPPPETPAEEEMETETEAEALQEK Unmodified 2811.2644 0.26441529 3296 Q8IZL8 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 77.775 77.835 3 2.3274E-27 89586 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.511 84.578 69733000 0 0 0 0 14270000 0 0 14059000 0 14318000 0 0 0 0 27086000 57954 3296 52068 488482;488483;488484;488485 387538;387539;387540;387541 387538 4 VQPPQQNYSLAELDEK Unmodified 1857.9109 0.91085723 4618 Q9NS73 MBIP MAP3K12-binding inhibitory protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 68.332 67.538 2 1.7403E-10 84881 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.7 122.02 85202000 0 27604000 0 0 5666500 7672600 0 2608500 0 8471600 9498000 8978400 5975100 3422600 5304600 57955 4618 52069 488486;488487;488488;488489;488490;488491;488492;488493;488494;488495;488496;488497 387542;387543;387544;387545;387546;387547;387548;387549;387550 387544 9 VQPPTPLLPSVK Unmodified 1274.7598 0.7598233 441 O60885 BRD4 Bromodomain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.349 75.408 2 0.044999 86950 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 33.229 27.448 172800000 0 0 0 8980600 10441000 12894000 13203000 10840000 11512000 13851000 13824000 20197000 12227000 16818000 28009000 57956 441 52070 488498;488499;488500;488501;488502;488503;488504;488505;488506;488507;488508;488509 387551;387552 387552 2 VQPSDQVGK Unmodified 956.49271 0.49270958 910 P0DN79;P35520 CBS Cystathionine beta-synthase yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.92 3.62 1 2 9 1 1 1 1 1 1 1 1 1 1 1 1 19.269 19.349 2 0.013157 93087 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 83.313 53.975 264600000 31319000 98330000 1837500 0 4186700 20068000 9231400 0 5840200 13406000 0 17859000 7459700 15693000 39370000 57957 910 52071 488510;488511;488512;488513;488514;488515;488516;488517;488518;488519;488520;488521 387553;387554;387555 387555 3 VQPVIGENGGDAR Unmodified 1310.6579 0.65787742 1132 P22059 OSBP Oxysterol-binding protein 1 yes yes 0 0 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 32.207 32.38 2 0.047722 34206 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.021 30.096 63405000 0 0 0 3428600 3520900 4948500 6585800 4571100 3904000 6391000 6512700 7020000 0 5404500 11118000 57958 1132 52072 488522;488523;488524;488525;488526;488527;488528;488529;488530;488531;488532 387556 387556 1 VQPVMAPDVPATPVAPTESQTVLDALQQR Oxidation (M) 3073.5754 0.57539993 2765 Q5T0F9 CC2D1B Coiled-coil and C2 domain-containing protein 1B yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 89.342 89.499 3 6.3084E-23 103868 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 70.465 64.623 16768000 0 0 0 0 0 0 0 1362400 0 4609000 3250700 1772300 0 0 5773800 57959 2765 52073 488533;488534;488535;488536;488537 387557;387558;387559;387560;387561 387557 4391 5 VQQACEMVMDILR 2 Oxidation (M) 1623.7419 0.7418831 3690 Q92945 KHSRP Far upstream element-binding protein 2 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 2 66.708 66.834 2 0.0021144 76624 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 93.258 82.734 33375000 0 0 0 2292900 0 0 2552100 0 0 3456000 5468800 19605000 0 0 0 57960 3690 52074 488538;488539;488540;488541;488542;488543 387562;387563;387564 387564 5254;5255 1 VQQACEMVMDILR Oxidation (M) 1607.747 0.74696848 3690 Q92945 KHSRP Far upstream element-binding protein 2 yes yes 0 1 0 By matching By matching By matching By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 78.872 78.942 2 8.4516E-07 90899 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.937 76.672 32285000 0 0 0 1610600 0 0 0 0 2626200 0 5469800 7941200 5411900 0 9225700 57961 3690 52074 488544;488545;488546;488547;488548;488549 387565 387565 5254;5255 1 VQQACEMVMDILR Unmodified 1591.7521 0.75205386 3690 Q92945 KHSRP Far upstream element-binding protein 2 yes yes 0 0 0 By MS/MS 10 0 1 1 88.307 88.457 2 0.00082763 102387 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.721 54.455 2728800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2728800 57962 3690 52074 488550 387566 387566 1 VQQAELHTGSLPR Unmodified 1434.7579 0.75792582 2231 Q13085 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 2 1 1 1 1 1 1 1 2 38.141 38.352 2;3 0.00039028 42465 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 75.89 64.655 337110000 0 0 0 20072000 22218000 26706000 26784000 22809000 14739000 30384000 28813000 33640000 29342000 28499000 53102000 57963 2231 52075 488551;488552;488553;488554;488555;488556;488557;488558;488559;488560;488561;488562;488563;488564 387567;387568;387569;387570;387571;387572;387573;387574;387575;387576;387577 387568 11 VQQGERDFEQISK Unmodified 1562.7689 0.76888444 428 O60749 SNX2 Sorting nexin-2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.64 1.67 1 21 1 2 2 2 2 2 2 2 1 2 2 1 1 33.886 33.718 2;3 0.00063276 37561 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 54.524 46.348 487540000 25108000 0 0 33367000 20935000 48029000 35084000 21766000 19944000 47251000 50206000 69184000 36983000 30263000 49424000 57964 428 52076 488565;488566;488567;488568;488569;488570;488571;488572;488573;488574;488575;488576;488577;488578;488579;488580;488581;488582;488583;488584;488585;488586 387578;387579;387580;387581;387582;387583;387584 387584 3 VQQGFLK Unmodified 818.46504 0.46503826 465 O75153 CLUH Clustered mitochondria protein homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 33.68 32.466 2 0.02563 35751 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 80.377 34.026 747540000 204720000 466480000 14872000 2858400 0 6032000 4259100 2940800 0 4982400 8245700 7621600 4644300 6111900 13767000 57965 465 52077 488587;488588;488589;488590;488591;488592;488593;488594;488595;488596;488597;488598;488599;488600 387585;387586;387587;387588;387589;387590 387585 6 VQQIQLLGR Unmodified 1053.6295 0.62947783 4525 Q9HD26 GOPC Golgi-associated PDZ and coiled-coil motif-containing protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.559 59.669 2 0.0041519 67101 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 87.754 68.051 102380000 0 0 0 4314000 3349700 9694200 7551900 6788500 3645200 10992000 10296000 8965400 6688400 9158500 20931000 57966 4525 52078 488601;488602;488603;488604;488605;488606;488607;488608;488609;488610;488611;488612 387591;387592;387593;387594;387595;387596;387597;387598;387599;387600;387601 387597 10 VQQLKETGHVSGPDGQNPEK Unmodified 2147.0607 0.060709362 4669 Q9NVI1 FANCI Fanconi anemia group I protein yes yes 0 0 1 By MS/MS 2 0 1 1 98.386 90.256 3 0.014812 116492 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 30.416 13.536 10566000 10566000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57967 4669 52079 488613 387602 387602 1 VQQLLHICSEHFDSK Unmodified 1839.8938 0.89376737 2252 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 61.205 59.447 3;4 2.2651E-06 65789 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 67.416 55.943 152960000 57182000 31602000 0 0 0 0 0 0 0 5351400 7443600 27381000 0 3143500 20853000 57968 2252 52080 488614;488615;488616;488617;488618;488619;488620 387603;387604;387605;387606;387607 387607 4 VQQLMAK Unmodified 816.45276 0.45275902 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 20.701 20.303 2 0.023344 21116 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 91.584 11.207 2162500000 0 496910000 0 106700000 106590000 107340000 102990000 111560000 94097000 166700000 199510000 197480000 156760000 132610000 183220000 57969 2102 52081 488621;488622;488623;488624;488625;488626;488627;488628;488629;488630;488631;488632;488633;488634 387608;387609;387610;387611;387612;387613;387614;387615;387616;387617;387618 387608 11 VQQLMAK Oxidation (M) 832.44767 0.44767364 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 10.773 10.64 2 0.015418 9265 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 86.935 8.9908 868510000 0 11670000 0 58487000 51422000 64146000 73119000 53670000 49640000 80321000 69675000 112000000 98248000 69170000 76941000 57970 2102 52081 488635;488636;488637;488638;488639;488640;488641;488642;488643;488644;488645;488646;488647 387619;387620;387621;387622;387623;387624;387625;387626;387627;387628 387621 3407 10 VQQLMTK Unmodified 846.46332 0.4633237 329 O43432 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 19.652 19.887 2 0.034409 20680 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 71.296 38.367 23179000 0 0 0 0 2583500 0 2842900 2550800 0 0 3831500 0 3599200 2745700 5025400 57971 329 52082 488648;488649;488650;488651;488652;488653;488654 387629;387630 387630 2 VQQLQISVDQHGDNLK Unmodified 1820.9381 0.93807503 77 CON__P19013;P19013 KRT4 Keratin, type II cytoskeletal 4 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 2 2 1 1 2 1 55.699 55.827 2;3 4.7795E-29 63231 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 143.17 124.9 + 480980000 0 0 0 4927200 0 0 110340000 276360000 4177600 0 0 14322000 66288000 4561500 0 57972 77 52083 488655;488656;488657;488658;488659;488660;488661;488662;488663;488664 387631;387632;387633;387634;387635;387636;387637;387638;387639;387640;387641;387642 387638 11 VQQLVAK Unmodified 784.48069 0.48068833 5268 Q9Y679 AUP1 Ancient ubiquitous protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 17.682 17.87 2 0.018505 16366 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 111.81 10.484 361750000 0 0 0 23253000 28922000 22127000 25981000 21083000 23124000 36711000 34485000 50986000 31937000 30799000 32341000 57973 5268 52084 488665;488666;488667;488668;488669;488670;488671;488672;488673;488674;488675;488676 387643;387644;387645;387646;387647;387648;387649;387650 387649 7 VQQLVPK Unmodified 810.49634 0.49633839 356 O43707 ACTN4 Alpha-actinin-4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.65 3.66 1 3 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 32.554 31.958 2 0.01787 27564 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 113.08 70.365 10682000000 349060000 9074700000 79676000 54327000 32648000 80377000 45401000 33104000 26763000 71045000 176990000 170410000 61023000 133310000 293640000 57974 356 52085 488677;488678;488679;488680;488681;488682;488683;488684;488685;488686;488687;488688;488689;488690;488691;488692;488693 387651;387652;387653;387654;387655;387656;387657;387658;387659;387660;387661;387662;387663;387664;387665;387666;387667;387668;387669;387670 387666 18 VQQQALHSQQQLEAEAQK Unmodified 2063.0396 0.039579989 672 O95613 PCNT Pericentrin yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 41.2 36.302 3 0.00065274 47498 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 55.189 36.43 18658000 0 18658000 0 0 0 0 0 0 0 0 0 0 0 0 0 57975 672 52086 488694;488695 387671 387671 1 VQQQEDEITVLK Unmodified 1428.746 0.74602373 4505 Q9HC35 EML4 Echinoderm microtubule-associated protein-like 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 53.222 52.905 2 8.4172E-11 58652 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 147.75 112.53 415770000 0 17651000 0 14374000 9253500 36030000 13509000 9726000 25883000 35842000 71084000 61170000 27871000 17259000 76114000 57976 4505 52087 488696;488697;488698;488699;488700;488701;488702;488703;488704;488705;488706;488707;488708 387672;387673;387674;387675;387676;387677;387678;387679;387680;387681;387682;387683;387684;387685 387677 14 VQQSFETPR Unmodified 1090.5407 0.5407224 1584 P49662 CASP4 Caspase-4;Caspase-4 subunit 1;Caspase-4 subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 29.55 29.66 2 0.0089221 32461 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 68.224 27.194 33746000 0 0 0 2771100 2156800 3277900 0 1967300 0 3150900 4679800 0 0 0 15742000 57977 1584 52088 488709;488710;488711;488712;488713;488714;488715 387686;387687;387688;387689;387690;387691;387692 387692 7 VQQSLGTRK Unmodified 1015.5774 0.57744226 5280 Q9Y6E2 BZW2 Basic leucine zipper and W2 domain-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.7902 6.9138 2 0.028005 5130 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 94.114 49.422 147630000 0 0 0 8713400 11178000 13690000 13087000 12702000 15187000 12611000 15742000 7252800 10885000 10544000 16039000 57978 5280 52089 488716;488717;488718;488719;488720;488721;488722;488723;488724;488725;488726;488727 387693;387694;387695;387696;387697;387698;387699 387697 6 VQQSSESSTSSPSQHEATPGAR Unmodified 2257.0207 0.02069504 464 O75152;A0A1B0GTU1 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.427 14.59 3 7.2211E-93 13395 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 161.8 148.77 293070000 0 0 0 18070000 17333000 20140000 16511000 15211000 17279000 29776000 34009000 39432000 24655000 23582000 37069000 57979 464 52090 488728;488729;488730;488731;488732;488733;488734;488735;488736;488737;488738;488739 387700;387701;387702;387703;387704;387705;387706;387707;387708;387709;387710;387711;387712 387703 13 VQQSSESSTSSPSQHEATPGARR Unmodified 2413.1218 0.12180607 464 O75152 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes yes 0 0 1 By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 11.479 11.663 4 0.0024249 9937 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 24.227 19.249 17385000 0 0 0 0 0 3084800 2204600 2022300 0 0 0 3742400 2065600 2077100 2188500 57980 464 52091 488740;488741;488742;488743;488744;488745;488746 387713;387714;387715;387716 387713 3 VQQTVQDLFGRAPSK Unmodified 1672.8897 0.88966827 1399 P38646 HSPA9 Stress-70 protein, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.72 2 13 1 1 1 1 1 1 1 1 1 1 1 1 1 2 63.374 62.692 2;3 2.4306E-13 70752 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 127.17 76.821 315580000 65124000 0 3720500 9390800 7822200 14867000 12706000 13633000 11580000 16038000 28982000 33066000 20906000 21639000 56110000 57981 1399 52092 488747;488748;488749;488750;488751;488752;488753;488754;488755;488756;488757;488758;488759;488760;488761 387717;387718;387719;387720;387721;387722;387723;387724;387725;387726;387727;387728;387729;387730 387721 12 VQQVIENHILK Unmodified 1319.7561 0.75613491 191 O14593 RFXANK DNA-binding protein RFXANK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 8.91 2.75 3 19 1 1 1 1 2 2 2 2 2 1 2 2 1 2 48.126 47.539 2;3 0.00045845 53915 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 84.615 38.935 665760000 61403000 24897000 36866000 0 3805700 46075000 56760000 40458000 40746000 67420000 10848000 106250000 77440000 7031800 85763000 57982 191 52093 488762;488763;488764;488765;488766;488767;488768;488769;488770;488771;488772;488773;488774;488775;488776;488777;488778;488779;488780;488781;488782;488783 387731;387732;387733;387734;387735;387736;387737;387738;387739;387740;387741;387742;387743;387744 387744 6 VQQVQPAMQAVIR Oxidation (M) 1482.7977 0.79768214 4003 Q96TA1 FAM129B Niban-like protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.437 42.613 2 4.1561E-08 46523 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.57 42.71 133770000 0 0 0 6342700 4020300 16870000 8758000 6068000 5406400 15957000 14841000 14657000 14121000 8552600 18174000 57983 4003 52094 488784;488785;488786;488787;488788;488789;488790;488791;488792;488793;488794;488795 387745;387746;387747;387748;387749;387750;387751;387752;387753;387754;387755 387748 5483 11 VQQVQPAMQAVIR Unmodified 1466.8028 0.80276752 4003 Q96TA1 FAM129B Niban-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 2 1 2 2 2 2 2 1 1 2 62.249 62.336 2;3 1.2644E-51 71170 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 183.47 166.8 271490000 0 0 0 14628000 10260000 36016000 12603000 16968000 9138500 32164000 29566000 30088000 12196000 15176000 52682000 57984 4003 52094 488796;488797;488798;488799;488800;488801;488802;488803;488804;488805;488806;488807;488808;488809;488810;488811;488812;488813;488814;488815;488816 387756;387757;387758;387759;387760;387761;387762;387763;387764;387765;387766;387767;387768;387769;387770;387771;387772;387773;387774 387764 13 VQQVQPAMQAVIRTDMDQIITSK Unmodified 2599.3462 0.34619204 4003 Q96TA1 FAM129B Niban-like protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 93.737 85.606 3 0.00055399 110885 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.342 46.765 5852700 5852700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57985 4003 52095 488817 387775 387775 1 VQREPLLTLVK Unmodified 1294.7973 0.79727144 2252 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 2 24 1 1 2 2 2 2 2 2 2 2 2 2 2 2 69.356 68.934 2;3 0.00085621 78226 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 62.14 47.883 1348300000 115990000 14415000 0 55169000 61443000 118470000 43074000 45453000 47408000 138810000 176820000 244970000 48185000 76861000 161260000 57986 2252 52096 488818;488819;488820;488821;488822;488823;488824;488825;488826;488827;488828;488829;488830;488831;488832;488833;488834;488835;488836;488837;488838;488839;488840;488841;488842;488843 387776;387777;387778;387779;387780;387781;387782;387783;387784;387785;387786;387787;387788;387789;387790;387791;387792;387793;387794;387795;387796 387778 15 VQRLHDIETENQK Unmodified 1608.822 0.82198264 1406;2357 P39880;Q13948 CUX1 Homeobox protein cut-like 1;Protein CASP no no 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 26.807 22.567 3 0.0296 32129 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 38.399 29.572 76883000 75361000 0 1522300 0 0 0 0 0 0 0 0 0 0 0 0 57987 1406;2357 52097 488844;488845 387797 387797 1 VQRPHSSPPR Unmodified 1159.621 0.62103841 4645 Q9NUJ3 TCP11L1 T-complex protein 11-like protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 6.2953 6.4849 3 0.025992 3694 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.44 34.233 20475000 0 0 0 0 0 0 1495400 1646500 1024800 2513800 2800200 3939000 2192400 1987600 2875100 57988 4645 52098 488846;488847;488848;488849;488850;488851;488852;488853;488854 387798;387799 387798 1 VQRPPSAASAAPSSSK Unmodified 1539.8005 0.80051892 2756 Q5SRE5 NUP188 Nucleoporin NUP188 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 17.978 18.133 3 0.00021203 17818 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 67.153 62.523 170920000 0 0 0 12955000 12641000 15548000 12078000 16083000 10132000 16931000 14507000 27183000 17324000 15539000 0 57989 2756 52099 488855;488856;488857;488858;488859;488860;488861;488862;488863;488864;488865 387800;387801;387802;387803;387804;387805;387806;387807;387808;387809;387810;387811;387812;387813;387814;387815;387816 387811 16 VQRSEDTLK Unmodified 1074.5669 0.56693715 3591 Q8WXH0 SYNE2 Nesprin-2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 27.204 27.046 2 0.02413 34098 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 101.64 0 765220000 0 6378000 0 107620000 53519000 53063000 47987000 125940000 38758000 65444000 57802000 73394000 72481000 38406000 24421000 57990 3591 52100 488866;488867;488868;488869;488870;488871;488872;488873;488874;488875;488876;488877;488878 387817;387818 387817 0 VQSATHFK Unmodified 916.47667 0.47666558 484;5026 O75351;Q9UN37 VPS4B;VPS4A Vacuolar protein sorting-associated protein 4B;Vacuolar protein sorting-associated protein 4A no no 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 11.876 8.7782 2 0.01212 11149 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 101.64 63.998 337820000 234210000 0 103610000 0 0 0 0 0 0 0 0 0 0 0 0 57991 484;5026 52101 488879;488880 387819;387820;387821 387821 3 VQSATHFKK Unmodified 1044.5716 0.5716286 484;5026 O75351;Q9UN37 VPS4B;VPS4A Vacuolar protein sorting-associated protein 4B;Vacuolar protein sorting-associated protein 4A no no 0 0 1 By MS/MS 2 0 1 1 8.5836 4.9449 2 0.02608 8557 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.54 53.693 11133000 11133000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57992 484;5026 52102 488881 387822 387822 1 VQSDGQIVLVDDWIK Unmodified 1713.8938 0.8937506 2152 Q08211 DHX9 ATP-dependent RNA helicase A yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 88.371 88.435 2 0.0075976 102406 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.841 36.302 7807400 0 0 0 0 930770 0 0 0 0 1695600 2125000 0 0 0 3056000 57993 2152 52103 488882;488883;488884;488885 387823;387824 387824 2 VQSFLASLDGEK Unmodified 1292.6612 0.66123147 3239 Q8IWE2 FAM114A1 Protein NOXP20 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76.762 76.292 2 1.9073E-08 88090 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 157.24 108.96 588840000 0 271940000 14411000 16237000 15792000 18788000 24112000 25714000 16159000 31975000 27726000 36953000 25142000 20391000 43501000 57994 3239 52104 488886;488887;488888;488889;488890;488891;488892;488893;488894;488895;488896;488897;488898;488899 387825;387826;387827;387828;387829;387830;387831;387832;387833;387834;387835;387836;387837;387838 387826 14 VQSFQMK Oxidation (M) 882.42694 0.4269382 3961 Q96QK1 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 14.74 11.435 2 0.022618 14196 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 99.384 58.698 385140000 16083000 364430000 4626500 0 0 0 0 0 0 0 0 0 0 0 0 57995 3961 52105 488900;488901;488902;488903 387839;387840;387841 387841 3 VQSFQMK Unmodified 866.43202 0.43202358 3961 Q96QK1 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 30.24 29.261 2 0.019189 38313 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.54 61.856 874630000 66515000 716890000 0 6486000 0 0 0 6836400 4354000 0 9072000 17318000 0 8972300 38186000 57996 3961 52105 488904;488905;488906;488907;488908;488909;488910;488911;488912 387842;387843;387844;387845;387846 387842 5 VQSGNINAAK Unmodified 1000.5302 0.53015772 1570 P49368 CCT3 T-complex protein 1 subunit gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.78 3.6 1 3 1 13 2 2 1 1 1 1 1 1 1 1 2 1 1 1 1 16.019 15.712 2 9.9008E-17 8473 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 169.44 109.08 2020600000 312060000 652220000 2228800 59074000 40444000 81533000 57630000 51259000 34346000 91952000 126880000 153560000 100960000 75631000 180810000 57997 1570 52106 488913;488914;488915;488916;488917;488918;488919;488920;488921;488922;488923;488924;488925;488926;488927;488928;488929;488930 387847;387848;387849;387850;387851;387852;387853;387854;387855;387856;387857;387858;387859;387860;387861;387862;387863;387864;387865;387866;387867;387868;387869 387856 20 VQSGSESVIQEYVDLR Unmodified 1807.8952 0.89520716 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 82.101 82.208 2 1.2217E-07 94920 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 108.59 81.888 31718000 0 0 0 0 2408700 2077100 1706300 2077100 2142400 4964500 3833500 4688200 0 0 7820400 57998 2501 52107 488931;488932;488933;488934;488935;488936;488937;488938;488939 387870;387871;387872;387873;387874;387875;387876;387877;387878 387873 9 VQSGVVINFEK Unmodified 1218.6608 0.66083754 4982 Q9UL03;Q5JSJ4 INTS6;DDX26B Integrator complex subunit 6;Protein DDX26B yes no 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 63.596 63.605 2 0.018958 72001 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.308 29.589 10088000 0 0 0 0 2922400 3383600 0 0 0 0 0 0 0 0 3782100 57999 4982 52108 488940;488941;488942 387879 387879 1 VQSLNIENGSEK Unmodified 1316.6572 0.65720872 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 35.507 35.289 2 3.6356E-34 39031 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 208.33 157.53 334230000 0 17891000 0 15399000 16262000 15363000 27108000 27816000 19397000 30334000 26095000 39280000 34672000 28253000 36364000 58000 2556 52109 488943;488944;488945;488946;488947;488948;488949;488950;488951;488952;488953;488954;488955 387880;387881;387882;387883;387884;387885;387886;387887;387888;387889;387890;387891 387882 12 VQSLNVDAIIR Unmodified 1226.6983 0.69828568 4521 Q9HCS7 XAB2 Pre-mRNA-splicing factor SYF1 yes yes 0 0 0 By MS/MS 10 0 1 1 77.166 77.264 2 0.043033 89214 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 50.353 23.839 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58001 4521 52110 488956 387892 387892 1 VQSLQQSCRYMEAELK Unmodified 1968.9397 0.93973129 4829 Q9P2W1 PSMC3IP Homologous-pairing protein 2 homolog yes yes 0 0 1 By MS/MS 2 0 1 1 72.425 64.187 3 0.0068906 85278 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.09 34.952 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58002 4829 52111 488957 387893 387893 1 VQSLQTALEK Unmodified 1115.6186 0.61863837 1406;2357 P39880;Q13948 CUX1 Homeobox protein cut-like 1;Protein CASP no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.47 2 1 14 1 1 1 1 1 1 1 1 1 1 2 2 1 47.864 47.642 2 0.00046583 59142 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.3 63.421 563980000 0 216160000 0 20903000 19922000 24042000 25294000 23163000 20441000 32905000 30880000 33559000 35501000 32127000 49087000 58003 1406;2357 52112 488958;488959;488960;488961;488962;488963;488964;488965;488966;488967;488968;488969;488970;488971;488972 387894;387895;387896;387897;387898;387899;387900;387901;387902;387903;387904;387905;387906 387897 12 VQSNCPLSPTEYLGEDK Unmodified 1935.8884 0.88840723 166 O00534 VWA5A von Willebrand factor A domain-containing protein 5A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 72.369 71.943 2 7.2362E-54 88810 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 150.21 135.53 75631000 0 44006000 0 3222500 2220900 4088200 2579400 2432500 0 3432700 3763100 3661400 3570800 2653500 0 58004 166 52113 488973;488974;488975;488976;488977;488978;488979;488980;488981;488982;488983 387907;387908;387909;387910;387911;387912;387913;387914;387915 387910 9 VQSTADIFGDEEGDLFK Unmodified 1869.8632 0.86323833 2840;5195 Q641Q2;Q9Y4E1 FAM21A;FAM21C WASH complex subunit FAM21A;WASH complex subunit FAM21C no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 86.067 84.611 2 7.1085E-19 104721 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 150.22 137.66 247720000 16134000 179490000 3615800 0 0 5457700 2703600 4456900 3948600 6936200 5118900 0 0 4310600 15555000 58005 2840;5195 52114 488984;488985;488986;488987;488988;488989;488990;488991;488992;488993;488994;488995;488996 387916;387917;387918;387919;387920;387921;387922;387923;387924;387925;387926;387927;387928;387929 387919 14 VQSTAFFSGDQASTDKEEDYIR Unmodified 2493.1296 0.12957679 2794 Q5TBB1 RNASEH2B Ribonuclease H2 subunit B yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 68.748 69.055 3 5.0426E-08 78671 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.413 62.32 12612000 0 0 0 0 0 0 0 0 0 4213600 0 0 0 0 8398700 58006 2794 52115 488997;488998 387930;387931 387931 2 VQSVEQIR Unmodified 957.52434 0.52434406 1786;2276 P56545;Q13363 CTBP2;CTBP1 C-terminal-binding protein 2;C-terminal-binding protein 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 25.354 25.582 2 0.0046416 27170 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 113.14 48.333 174560000 0 0 0 14385000 11340000 18684000 0 16320000 0 18911000 21312000 21160000 12409000 15296000 24740000 58007 1786;2276 52116 488999;489000;489001;489002;489003;489004;489005;489006;489007;489008;489009 387932;387933;387934;387935;387936;387937;387938;387939;387940;387941;387942 387933 11 VQSVEQIREVASGAAR Unmodified 1698.9013 0.90129559 1786;2276 P56545;Q13363 CTBP2;CTBP1 C-terminal-binding protein 2;C-terminal-binding protein 1 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.59 55.716 3 0.00047029 63099 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 59.513 46.395 106610000 0 0 0 4886400 5275200 8534900 8041200 8770300 3938600 11822000 11503000 11071000 6948500 8893100 16926000 58008 1786;2276 52117 489010;489011;489012;489013;489014;489015;489016;489017;489018;489019;489020;489021 387943;387944;387945;387946 387943 4 VQSVETVEGCTHEVALPAEEDYLPLK Unmodified 2912.4114 0.4113543 1451 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 85.497 82.669 3 0.00075983 98712 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 34.817 31.946 51342000 0 47467000 3875100 0 0 0 0 0 0 0 0 0 0 0 0 58009 1451 52118 489022;489023 387947;387948 387947 2 VQSYLENPTSYHLQQSQHQK Unmodified 2414.1615 0.16148604 1090 P19484 TFEB Transcription factor EB yes yes 0 0 0 By MS/MS 2 0 2 2 61.897 53.642 3;4 6.0918E-10 72640 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.049 80.659 44862000 44862000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58010 1090 52119 489024;489025 387949;387950;387951 387950 3 VQTANEVK Unmodified 887.47125 0.47124585 1328 P33176 KIF5B Kinesin-1 heavy chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 7.6041 7.0689 2 0.014218 7866 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.19 19.144 189830000 24139000 96138000 0 6285000 6890500 9340600 9808600 0 8745700 4225000 13503000 0 0 3932500 6824200 58011 1328 52120 489026;489027;489028;489029;489030;489031;489032;489033;489034;489035;489036;489037 387952;387953;387954;387955;387956 387953 5 VQTAVTMK Unmodified 876.47389 0.47388839 4527 Q9HD42 CHMP1A Charged multivesicular body protein 1a yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 22.565 22.357 2 0.01701 22256 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.351 27.533 141650000 0 82233000 0 3603700 0 3062100 0 2730100 3457800 8291800 11666000 0 5001000 7018300 14584000 58012 4527 52121 489038;489039;489040;489041;489042;489043;489044;489045;489046;489047 387957;387958;387959;387960;387961 387960 5 VQTDPPSVPICDLYPNGVFPK Unmodified 2342.1617 0.16166896 1631 P50579 METAP2 Methionine aminopeptidase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.71 2.89 3 1 20 3 1 1 2 2 2 1 2 2 2 2 2 2 89.948 89.402 2;3 6.1885E-09 110359 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.646 67.459 993220000 0 914930000 3777200 0 1607000 3384400 2540700 4933800 1943100 13774000 9465000 8589300 1533500 4399100 22345000 58013 1631 52122 489048;489049;489050;489051;489052;489053;489054;489055;489056;489057;489058;489059;489060;489061;489062;489063;489064;489065;489066;489067;489068;489069;489070;489071 387962;387963;387964;387965;387966;387967;387968;387969;387970;387971;387972;387973;387974 387965 13 VQTEPVTSMTIIEQVGK Unmodified 1858.971 0.97101464 1697 P52739 ZNF131 Zinc finger protein 131 yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 74.908 75.056 4 0.0078402 86495 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 24.793 8.1277 37677000 0 0 0 0 0 6970300 0 1517300 3871100 0 0 0 2503000 2791800 20024000 58014 1697 52123 489072;489073;489074;489075;489076;489077 387975 387975 1 VQTESLQER Unmodified 1088.5462 0.54620171 1106 P20585 MSH3 DNA mismatch repair protein Msh3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.322 19.518 2 0.0038222 19508 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 88.819 20.436 118110000 0 0 0 8802800 7608300 11433000 7260700 7890600 6849800 13646000 9183700 13756000 9490000 8880400 13307000 58015 1106 52124 489078;489079;489080;489081;489082;489083;489084;489085;489086;489087;489088;489089 387976;387977;387978;387979;387980;387981;387982;387983;387984;387985 387985 8 VQTESSTGSVGSNR Unmodified 1407.659 0.65899964 4119 Q9BRX2 PELO Protein pelota homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 11.186 11.327 2 7.1863E-14 9504 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 134.2 115.88 156140000 0 0 0 10470000 7535600 11659000 10084000 12052000 6871300 13781000 14444000 16170000 17185000 12151000 23737000 58016 4119 52125 489090;489091;489092;489093;489094;489095;489096;489097;489098;489099;489100;489101 387986;387987;387988;387989;387990;387991;387992;387993;387994;387995;387996;387997;387998 387989 12 VQTEVLQK Unmodified 943.53385 0.53384611 4066 Q99848 EBNA1BP2 Probable rRNA-processing protein EBP2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 24.36 24.218 2 0.0051142 25519 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 108.09 19.445 240890000 0 41164000 0 13381000 9634800 10834000 12150000 11232000 9445000 14620000 15940000 24014000 24970000 20241000 33268000 58017 4066 52126 489102;489103;489104;489105;489106;489107;489108;489109;489110;489111;489112;489113;489114 387999;388000;388001;388002;388003;388004;388005;388006 388000 7 VQTFPFLGR Unmodified 1063.5815 0.581465 1234 P28340 POLD1 DNA polymerase delta catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.515 80.576 2 0.0035244 93501 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 107.9 77.82 292130000 0 0 0 15864000 13308000 29157000 17190000 22397000 15819000 31142000 23546000 34834000 19989000 21561000 47321000 58018 1234 52127 489115;489116;489117;489118;489119;489120;489121;489122;489123;489124;489125;489126 388007;388008;388009;388010;388011;388012;388013;388014;388015;388016;388017;388018 388017 12 VQTHLENPTR Unmodified 1193.6153 0.61528433 1092 P19532 TFE3 Transcription factor E3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.029 20.23 3 0.0079835 20755 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 45.077 32.501 121420000 0 0 0 8256800 7087500 9678100 8442500 5819000 7487800 13671000 12058000 14379000 9567100 6981100 17992000 58019 1092 52128 489127;489128;489129;489130;489131;489132;489133;489134;489135;489136;489137;489138 388019;388020;388021;388022;388023;388024 388020 6 VQTIIEHLQEK Unmodified 1336.7351 0.73506511 4816 Q9P2E3 ZNFX1 NFX1-type zinc finger-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 60.17 53.12 3 0.011986 72084 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.632 38.419 41589000 24724000 16865000 0 0 0 0 0 0 0 0 0 0 0 0 0 58020 4816 52129 489139;489140 388025 388025 1 VQTILEK Unmodified 829.49092 0.49091866 694 O95817 BAG3 BAG family molecular chaperone regulator 3 yes yes 0 0 0 By MS/MS By MS/MS 3 0 2 1 1 35.224 30.365 2 0.02546 37667 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 100.19 31.273 24533000 516990 24016000 0 0 0 0 0 0 0 0 0 0 0 0 0 58021 694 52130 489141;489142 388026 388026 1 VQTLEELEELGK Unmodified 1386.7242 0.72422566 4189 Q9BVJ6;Q5TAP6 UTP14A;UTP14C U3 small nucleolar RNA-associated protein 14 homolog A;U3 small nucleolar RNA-associated protein 14 homolog C yes no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 79.108 79.133 2 0.0040828 91489 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 58.63 17.181 36449000 0 0 0 1574500 1905800 5267900 2228100 3428600 0 5914700 3841200 0 4512600 0 7776100 58022 4189 52131 489143;489144;489145;489146;489147;489148;489149;489150;489151;489152 388027;388028;388029;388030;388031;388032 388027 6 VQTLSNQPLLK Unmodified 1239.7187 0.71868677 3308 Q8N163 CCAR2 Cell cycle and apoptosis regulator protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 4 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 55.838 54.453 2 1.8377E-16 70166 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 204.91 141.34 756340000 22772000 299810000 5405500 47385000 30855000 28820000 42614000 32568000 31924000 34049000 30468000 40693000 34209000 31195000 43566000 58023 3308 52132 489153;489154;489155;489156;489157;489158;489159;489160;489161;489162;489163;489164;489165;489166;489167;489168 388033;388034;388035;388036;388037;388038;388039;388040;388041;388042;388043;388044;388045;388046;388047;388048;388049 388037 15 VQTPEVDVK Unmodified 1013.5393 0.53932542 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.655 37.836 2 0.0039613 41607 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 88.37 55.012 319260000 0 0 0 16830000 15381000 19014000 24596000 27383000 23607000 22889000 25057000 36274000 40715000 27251000 40270000 58024 2172 52133 489169;489170;489171;489172;489173;489174;489175;489176;489177;489178;489179;489180 388050;388051;388052;388053;388054;388055;388056;388057;388058;388059;388060;388061 388058 11 VQTSLCPAHQDK Unmodified 1382.6612 0.66124824 781 P04279 SEMG1 Semenogelin-1;Alpha-inhibin-92;Alpha-inhibin-31;Seminal basic protein yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 19.4 19.604 3 0.015183 19909 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 34.185 25.135 10837000 0 0 0 3336500 0 0 0 5557900 0 0 0 1943000 0 0 0 58025 781 52134 489181;489182;489183 388062 388062 1 VQTTPPPAVQGQK Unmodified 1349.7303 0.73031409 2651 Q2M2I8 AAK1 AP2-associated protein kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.041 28.236 2 4.7462E-08 30055 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 103.7 79.67 86050000 0 0 0 3215000 4136700 5473100 5202100 7494700 5430000 7371000 9614900 9248000 7907200 7281700 13676000 58026 2651 52135 489184;489185;489186;489187;489188;489189;489190;489191;489192;489193;489194;489195 388063;388064;388065;388066;388067;388068;388069;388070;388071;388072;388073;388074 388068 12 VQTVLGLVEPSK Unmodified 1268.734 0.73400248 3766 Q96BW5 PTER Phosphotriesterase-related protein yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 2 1 6 2 1 1 1 1 1 1 1 77.113 75.994 2 0.0013009 87750 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 69.01 52.293 307960000 0 275640000 4560400 0 779000 0 0 0 0 2548700 5010300 5839300 0 3988400 9593400 58027 3766 52136 489196;489197;489198;489199;489200;489201;489202;489203;489204 388075;388076;388077;388078;388079;388080 388078 6 VQTVSPREPASK Unmodified 1297.699 0.69901396 4495 Q9HB21 PLEKHA1 Pleckstrin homology domain-containing family A member 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 20.694 16.927 3 0.012489 21811 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 65.179 42.061 53941000 44716000 0 9224800 0 0 0 0 0 0 0 0 0 0 0 0 58028 4495 52137 489205;489206 388081;388082 388082 1 VQVALEELQDLK Unmodified 1383.7609 0.76094551 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 81.266 81.312 2 2.7518E-07 94230 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 117.67 88.511 385730000 0 0 0 13633000 25364000 36880000 21692000 28107000 24159000 67095000 47894000 54985000 23871000 42054000 0 58029 2392 52138 489207;489208;489209;489210;489211;489212;489213;489214;489215;489216;489217 388083;388084;388085;388086;388087;388088;388089;388090;388091;388092;388093;388094 388092 11 VQVALGNISSK Unmodified 1114.6346 0.63462279 561 O75935 DCTN3 Dynactin subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 52.527 52.677 2 0.0052806 59790 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 59.426 30.931 123860000 0 0 0 6332300 5923300 0 7021500 9303600 5289200 14419000 13006000 18926000 8950100 9841800 24847000 58030 561 52139 489218;489219;489220;489221;489222;489223;489224;489225;489226;489227;489228;489229 388095;388096;388097;388098;388099;388100;388101;388102;388103;388104 388100 10 VQVCTNPTK Unmodified 1045.5226 0.5226295 5375 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 4 2 1 1 46.145 46.612 2 0.022769 52286 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 51.335 14.779 + 24356000 0 0 0 0 0 0 0 0 0 0 11848000 0 0 4219900 8288300 58031 5375 52140 489230;489231;489232;489233 388105 388105 1 VQVEAIEGGALQK Unmodified 1340.73 0.72997974 4344 Q9H173 SIL1 Nucleotide exchange factor SIL1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 56.23 55.922 2 0.0052171 63419 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 66.92 26.196 214720000 0 165250000 0 0 2743400 4196700 3974400 3117900 2581800 6148900 3782100 6914900 4405400 3894200 7708500 58032 4344 52141 489234;489235;489236;489237;489238;489239;489240;489241;489242;489243;489244;489245 388106;388107;388108;388109;388110;388111;388112;388113;388114 388107 9 VQVEYKGETK Unmodified 1179.6136 0.61355299 934;1743 P11142;P54652 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.74 3.54 7 2 22 2 5 2 2 2 1 2 2 2 2 2 1 2 2 2 19.087 18.219 2;3 4.8265E-05 25933 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 129.85 88.549 3286300000 230690000 1967100000 92227000 85858000 74009000 2857700 103880000 74914000 18319000 79769000 133840000 41968000 78072000 100640000 202180000 58033 934;1743 52142 489246;489247;489248;489249;489250;489251;489252;489253;489254;489255;489256;489257;489258;489259;489260;489261;489262;489263;489264;489265;489266;489267;489268;489269;489270;489271;489272;489273;489274;489275;489276 388115;388116;388117;388118;388119;388120;388121;388122;388123;388124;388125;388126;388127;388128;388129;388130;388131;388132 388125 12 VQVFLPR Unmodified 857.51232 0.51232281 1623 P50452 SERPINB8 Serpin B8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.45 61.55 2 0.039014 70424 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 69.234 30.397 80373000 0 0 0 23728000 4049300 4145800 4815700 6165700 3101300 5905800 6077600 8703200 4899100 3913200 4868700 58034 1623 52143 489277;489278;489279;489280;489281;489282;489283;489284;489285;489286;489287;489288 388133;388134;388135 388134 3 VQVGAEPSVQVEFPR Unmodified 1640.8522 0.85222014 5340 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 4 2 1 1 36.169 35.985 3 0.0011018 40092 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 37.013 4.945 + 13573000 0 0 0 0 4985700 4271200 0 4316200 0 0 0 0 0 0 0 58035 5340 52144 489289;489290;489291;489292 388136;388137 388137 2 VQVLYPDGQAQMIHPK Unmodified 1822.94 0.93998929 3871 Q96HW7 INTS4 Integrator complex subunit 4 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 65.341 64.812 3 0.0023942 73174 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 44.294 33.955 52217000 0 9982400 0 3908100 0 3912100 0 3794900 0 6378900 0 6336400 3961200 5229000 8714100 58036 3871 52145 489293;489294;489295;489296;489297;489298;489299;489300;489301 388138;388139;388140;388141;388142;388143 388142 6 VQVPNMQDK Unmodified 1057.5226 0.5226295 2539 Q15459 SF3A1 Splicing factor 3A subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 37.58 37.027 2 0.021175 40298 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.429 73.792 711070000 0 460390000 981700 15968000 16662000 22711000 16267000 24979000 14019000 21974000 22269000 0 23814000 32351000 38688000 58037 2539 52146 489302;489303;489304;489305;489306;489307;489308;489309;489310;489311;489312;489313;489314 388144;388145;388146;388147;388148;388149 388146 1 VQVPNMQDK Oxidation (M) 1073.5175 0.51754412 2539 Q15459 SF3A1 Splicing factor 3A subunit 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching 6 4 2 2 1 1 1 1 19.808 17.97 2 0.0051818 22745 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.36 50.915 172590000 11262000 137980000 0 0 0 0 0 0 0 0 0 17086000 0 0 6262000 58038 2539 52146 489315;489316;489317;489318 388150;388151 388150 4179 2 VQVQDNEGCPVEALVK Unmodified 1783.8774 0.87744861 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.831 68.91 2 2.1622E-20 79306 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 138.45 129.7 401940000 0 0 0 19367000 17437000 30894000 21151000 16829000 16905000 31026000 54221000 49288000 26409000 46772000 71638000 58039 1124 52147 489319;489320;489321;489322;489323;489324;489325;489326;489327;489328;489329;489330 388152;388153;388154;388155;388156;388157;388158;388159;388160;388161;388162;388163;388164;388165 388162 14 VQVQDVVLK Unmodified 1026.6073 0.6073454 3343 Q8N5C6 SRBD1 S1 RNA-binding domain-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 61.355 55.48 2 0.035136 71187 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 63.673 36.419 56492000 0 56492000 0 0 0 0 0 0 0 0 0 0 0 0 0 58040 3343 52148 489331 388166 388166 1 VQVQVVER Unmodified 955.54508 0.5450795 565 O75955 FLOT1 Flotillin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 33.256 33.495 2 0.0099307 36643 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 81.296 22.315 43674000 0 0 0 0 2658600 2528500 3081500 2868500 2498400 3531300 6694400 6053200 5043000 3760600 4956000 58041 565 52149 489332;489333;489334;489335;489336;489337;489338;489339;489340;489341;489342 388167;388168 388168 2 VQVSVLK Unmodified 771.48544 0.48543935 737 P00966 ASS1 Argininosuccinate synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.07 3.83 1 7 2 17 5 3 2 1 2 1 2 1 1 2 2 2 1 2 43.887 42.361 1;2 0.014103 53778 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 149.4 71.68 21398000000 5066300000 13656000000 487790000 71266000 60432000 89573000 88354000 0 55676000 113800000 333820000 244650000 122020000 258110000 750770000 58042 737 52150 489343;489344;489345;489346;489347;489348;489349;489350;489351;489352;489353;489354;489355;489356;489357;489358;489359;489360;489361;489362;489363;489364;489365;489366;489367;489368;489369 388169;388170;388171;388172;388173;388174;388175;388176;388177;388178;388179;388180;388181;388182;388183;388184;388185;388186;388187;388188;388189;388190;388191;388192;388193;388194;388195;388196;388197;388198;388199 388191 30 VQVSYKGETK Unmodified 1137.603 0.60298831 908 P0DMV9;P0DMV8 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 5 2 1 2 21.488 17.667 2;3 0.0027747 25160 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.806 57.009 134640000 107970000 18016000 8649600 0 0 0 0 0 0 0 0 0 0 0 0 58043 908 52151 489370;489371;489372;489373;489374 388200;388201;388202 388201 2 VQVVDEEGDQQHQEGK Unmodified 1823.8286 0.82858416 2076 Q02447 SP3 Transcription factor Sp3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.301 20.503 3 6.2193E-43 20076 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 164.15 157.17 444550000 0 0 0 35695000 24263000 31879000 34305000 19061000 29933000 47167000 33165000 52031000 45046000 42356000 49651000 58044 2076 52152 489375;489376;489377;489378;489379;489380;489381;489382;489383;489384;489385;489386 388203;388204;388205;388206;388207;388208;388209;388210;388211;388212;388213;388214;388215;388216;388217;388218;388219;388220;388221 388215 19 VQVVGTYR Unmodified 920.50797 0.50796571 1183 P25205 MCM3 DNA replication licensing factor MCM3 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 31.842 32.175 2 0.0044044 33899 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 110.81 46.031 218830000 0 0 0 0 0 18722000 0 13412000 10843000 20047000 27915000 45287000 16836000 15852000 49917000 58045 1183 52153 489387;489388;489389;489390;489391;489392;489393;489394;489395 388222;388223;388224;388225;388226;388227;388228 388227 7 VQVYQEPNRETR Unmodified 1517.7587 0.7586541 388 O60256 PRPSAP2 Phosphoribosyl pyrophosphate synthase-associated protein 2 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 24.153 24.335 3 0.0010805 25595 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 66.498 51.11 71867000 0 0 0 4235200 5756200 0 7396400 8693500 7326600 0 0 13163000 0 6974200 18322000 58046 388 52154 489396;489397;489398;489399;489400;489401;489402;489403 388229;388230;388231;388232;388233;388234 388233 6 VQYAPERPGPQPTAETTR Unmodified 1996.9967 0.99665254 1571 P49407 ARRB1 Beta-arrestin-1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.178 37.359 3 0.00090423 40360 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.053 24.222 75916000 0 0 0 4404300 2668500 5260900 5156400 3585800 4137500 5922000 9362300 10810000 5650000 6687200 12270000 58047 1571 52155 489404;489405;489406;489407;489408;489409;489410;489411;489412;489413;489414;489415 388235;388236;388237;388238;388239;388240 388235 6 VQYDLQK Unmodified 892.46543 0.46543219 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.886 27.086 2 0.0174 29212 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 119.57 56.418 303260000 0 0 0 69183000 16361000 9533400 20020000 87190000 7719600 10314000 17344000 26234000 28668000 5763300 4928100 58048 1029 52156 489416;489417;489418;489419;489420;489421;489422;489423;489424;489425;489426;489427 388241;388242;388243;388244;388245;388246;388247;388248 388248 8 VQYEEVAEK Unmodified 1093.5292 0.52915466 3310 Q8N1B4 VPS52 Vacuolar protein sorting-associated protein 52 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 27.674 27.824 2 0.027124 29450 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 49.536 28.837 28223000 0 0 0 0 6227100 0 0 0 7638400 7310600 0 7047100 0 0 0 58049 3310 52157 489428;489429;489430;489431 388249 388249 1 VQYHPRDQNK Unmodified 1283.6371 0.6370824 2514 Q15291 RBBP5 Retinoblastoma-binding protein 5 yes yes 0 0 1 By MS/MS 2 0 1 1 7.6529 4.1378 2 0.0003791 7385 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 143.7 118.87 15430000 15430000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58050 2514 52158 489432 388250 388250 1 VQYLEDTDPFACANFPEPR Unmodified 2268.0157 0.015733004 5260 Q9Y613 FHOD1 FH1/FH2 domain-containing protein 1 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 86.193 86.329 3 0.022582 99865 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 24.875 20.07 7507500 0 0 0 0 0 0 0 0 0 4073900 0 0 0 0 3433700 58051 5260 52159 489433;489434 388251 388251 1 VQYLEQEVEEFVGK Unmodified 1695.8356 0.83556702 660 O95429 BAG4 BAG family molecular chaperone regulator 4 yes yes 0 0 0 By MS/MS 2 0 1 1 93.963 89.067 2 0.00082386 110544 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.043 63.349 20313000 0 20313000 0 0 0 0 0 0 0 0 0 0 0 0 0 58052 660 52160 489435 388252 388252 1 VQYLSAQNK Unmodified 1049.5506 0.55055881 401 O60447 EVI5 Ecotropic viral integration site 5 protein homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching 10 0 5 1 1 1 1 1 26.068 26.122 2 0.024533 28245 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 50.607 16.354 8651800 0 0 0 0 2034800 1512100 1746700 0 1124200 0 2234000 0 0 0 0 58053 401 52161 489436;489437;489438;489439;489440 388253;388254 388253 2 VQYPDAKPVR Unmodified 1171.635 0.63495714 5212 Q9Y4X5 ARIH1 E3 ubiquitin-protein ligase ARIH1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 27.612 27.729 3 0.035524 29878 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 51.276 26.438 96986000 0 0 0 8165400 8977300 5642800 6207200 15912000 4070900 0 0 15935000 17354000 14721000 0 58054 5212 52162 489441;489442;489443;489444;489445;489446;489447;489448;489449 388255;388256;388257;388258 388255 1 VQYPDYYAIIK Unmodified 1371.7075 0.70745338 3143 Q86U86 PBRM1 Protein polybromo-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.798 79.857 2 0.012623 92324 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 63.397 43.407 87691000 0 0 0 4280300 4111700 6408400 5447600 5986200 4762100 9784400 7406600 10211000 6025400 7728400 15539000 58055 3143 52163 489450;489451;489452;489453;489454;489455;489456;489457;489458;489459;489460;489461 388259;388260;388261;388262;388263 388259 5 VQYPQSQACK Unmodified 1207.5656 0.56555694 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.945 19.141 2 0.00036706 19808 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 138.54 96.436 148970000 0 0 0 7824900 8812800 16715000 9173000 8899000 7364200 15128000 11812000 18065000 14424000 11723000 19027000 58056 2392 52164 489462;489463;489464;489465;489466;489467;489468;489469;489470;489471;489472;489473 388264;388265;388266;388267;388268;388269;388270;388271;388272;388273;388274;388275 388264 12 VQYTETEPYHNYR Unmodified 1698.7638 0.76379906 3167 Q86VM9 ZC3H18 Zinc finger CCCH domain-containing protein 18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 36.846 37.109 3 5.6536E-07 41573 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 93.959 86.551 161480000 0 0 0 0 9414300 0 11745000 11413000 11378000 16155000 14739000 23926000 20378000 19071000 23260000 58057 3167 52165 489474;489475;489476;489477;489478;489479;489480;489481;489482;489483 388276;388277;388278;388279;388280;388281;388282;388283;388284;388285;388286 388286 9 VQYTLPDGSTLDVGPAR Unmodified 1787.9054 0.90537792 1444 P42025 ACTR1B Beta-centractin yes yes 0 0 0 By MS/MS 10 0 1 1 82.13 82.332 2 0.00039896 94985 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.345 34.227 9177600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9177600 58058 1444 52166 489484 388287 388287 1 VQYVIQGYHK Unmodified 1233.6506 0.6506072 4731 Q9NXR7 BRE BRCA1-A complex subunit BRE yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 41.484 40.265 3 0.0044432 44833 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 53.683 35.874 90645000 37991000 0 11377000 4460200 0 8612000 4707000 5049600 3347900 0 0 0 7898600 7201500 0 58059 4731 52167 489485;489486;489487;489488;489489;489490;489491;489492;489493 388288;388289;388290;388291;388292;388293;388294 388288 6 VRAEEREQIK Unmodified 1256.6837 0.68369824 66;58;779;53 P04259;CON__O95678;O95678;CON__P02538;P02538;CON__P04259 KRT6B;KRT75;KRT6A Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 6A no no 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 2 1 1 1 1 1 1 1 2 1 7.5484 7.6725 3 0.0076824 4563 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 99.283 48.929 + 2892600000 0 0 0 266520000 46474000 47976000 130120000 255910000 51614000 181160000 364980000 278170000 1060600000 138580000 70461000 58060 779;53;58;66 52168 489494;489495;489496;489497;489498;489499;489500;489501;489502;489503;489504;489505;489506;489507 388295;388296;388297;388298;388299;388300;388301;388302;388303;388304 388300 6 VRAESFDTWANK Unmodified 1422.6892 0.68917755 1436 P41229 KDM5C Lysine-specific demethylase 5C yes yes 0 0 1 By MS/MS 2 0 1 1 57.815 49.623 3 4.6101E-05 67647 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.902 88.292 26441000 26441000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58061 1436 52169 489508 388305 388305 1 VRAEVEQK Unmodified 957.52434 0.52434406 3255 Q8IX12 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 7.3261 4.5935 2 0.015003 6521 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 124.08 36.758 257120000 0 45055000 212060000 0 0 0 0 0 0 0 0 0 0 0 0 58062 3255 52170 489509;489510 388306 388306 1 VRAIYDFEAAEDNELTFK Unmodified 2130.0269 0.026949617 3659 Q92783 STAM Signal transducing adapter molecule 1 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 86.313 80.43 3 1.4568E-05 103202 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.661 74.475 12613000 12613000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58063 3659 52171 489511;489512 388307;388308 388308 2 VRALEEANADLEVK Unmodified 1555.8206 0.82058566 56;70;73;981;76 CON__P02533;P02533;CON__P08779;P08779;CON__P13646-1;CON__P19012;P19012;P13646;CON__ENSEMBL:ENSP00000377550 KRT14;KRT16;KRT15;KRT13 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16;Keratin, type I cytoskeletal 15;Keratin, type I cytoskeletal 13 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 22 1 1 3 4 1 3 1 1 4 3 53.047 53.217 2;3 0.00099337 60914 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 58.079 49.513 + 198360000 0 0 0 16003000 0 6484700 9721100 34048000 4670300 24351000 4835700 10648000 74342000 13252000 0 58064 56;70;73;76;981 52172 489513;489514;489515;489516;489517;489518;489519;489520;489521;489522;489523;489524;489525;489526;489527;489528;489529;489530;489531;489532;489533;489534 388309;388310;388311;388312;388313;388314;388315;388316;388317 388316 9 VRALEEANMK Oxidation (M) 1175.5969 0.59685707 106 Q9C075;CON__Q9C075 KRT23 Keratin, type I cytoskeletal 23 yes no 0 1 1 By MS/MS By matching By matching By matching By matching By matching 10 0 6 1 1 1 1 1 1 14.235 14.371 3 0.0021041 13837 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 66.19 55.438 + 23637000 0 0 0 12043000 0 1232500 0 3320600 0 3140600 0 2626900 0 1274000 0 58065 106 52173 489535;489536;489537;489538;489539;489540 388318 388318 139 1 VRALEEANTELEVK Unmodified 1599.8468 0.84680041 84 CON__Q04695;Q04695 KRT17 Keratin, type I cytoskeletal 17 no no 0 0 1 By MS/MS 2 0 1 1 56.939 53.087 3 0.012395 66382 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 64.394 53.606 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58066 84 52174 489541 388319 388319 1 VRALEESNYELEGK Unmodified 1635.8104 0.8104149 72;57 CON__P13645;P13645;CON__P02535-1 KRT10 Keratin, type I cytoskeletal 10 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 19 2 226 9 7 5 58 23 12 16 31 13 13 9 20 16 11 4 68.166 67.894 2;3 7.7001E-255 50808 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 251.24 224.35 + 58995000000 273190000 442570000 1259900000 8387700000 2305700000 3989800000 2817700000 4975100000 3520100000 4556900000 4471000000 8994200000 7238600000 3106100000 2656200000 58067 72;57 52175 489542;489543;489544;489545;489546;489547;489548;489549;489550;489551;489552;489553;489554;489555;489556;489557;489558;489559;489560;489561;489562;489563;489564;489565;489566;489567;489568;489569;489570;489571;489572;489573;489574;489575;489576;489577;489578;489579;489580;489581;489582;489583;489584;489585;489586;489587;489588;489589;489590;489591;489592;489593;489594;489595;489596;489597;489598;489599;489600;489601;489602;489603;489604;489605;489606;489607;489608;489609;489610;489611;489612;489613;489614;489615;489616;489617;489618;489619;489620;489621;489622;489623;489624;489625;489626;489627;489628;489629;489630;489631;489632;489633;489634;489635;489636;489637;489638;489639;489640;489641;489642;489643;489644;489645;489646;489647;489648;489649;489650;489651;489652;489653;489654;489655;489656;489657;489658;489659;489660;489661;489662;489663;489664;489665;489666;489667;489668;489669;489670;489671;489672;489673;489674;489675;489676;489677;489678;489679;489680;489681;489682;489683;489684;489685;489686;489687;489688;489689;489690;489691;489692;489693;489694;489695;489696;489697;489698;489699;489700;489701;489702;489703;489704;489705;489706;489707;489708;489709;489710;489711;489712;489713;489714;489715;489716;489717;489718;489719;489720;489721;489722;489723;489724;489725;489726;489727;489728;489729;489730;489731;489732;489733;489734;489735;489736;489737;489738;489739;489740;489741;489742;489743;489744;489745;489746;489747;489748;489749;489750;489751;489752;489753;489754;489755;489756;489757;489758;489759;489760;489761;489762;489763;489764;489765;489766;489767;489768;489769;489770;489771;489772;489773;489774;489775;489776;489777;489778;489779;489780;489781;489782;489783;489784;489785;489786;489787;489788 388320;388321;388322;388323;388324;388325;388326;388327;388328;388329;388330;388331;388332;388333;388334;388335;388336;388337;388338;388339;388340;388341;388342;388343;388344;388345;388346;388347;388348;388349;388350;388351;388352;388353;388354;388355;388356;388357;388358;388359;388360;388361;388362;388363;388364;388365;388366;388367;388368;388369;388370;388371;388372;388373;388374;388375;388376;388377;388378;388379;388380;388381;388382;388383;388384;388385;388386;388387;388388;388389;388390;388391;388392;388393;388394;388395;388396;388397;388398;388399;388400;388401;388402;388403;388404;388405;388406;388407;388408;388409;388410;388411;388412;388413;388414;388415;388416;388417;388418;388419;388420;388421;388422;388423;388424;388425;388426;388427;388428;388429;388430;388431;388432;388433;388434;388435;388436;388437;388438;388439;388440;388441;388442;388443;388444;388445;388446;388447;388448;388449;388450;388451;388452;388453;388454;388455;388456;388457;388458;388459;388460;388461;388462;388463;388464;388465;388466;388467;388468;388469;388470;388471;388472;388473;388474;388475;388476;388477;388478;388479;388480;388481;388482;388483;388484;388485;388486;388487;388488;388489;388490;388491;388492;388493;388494;388495;388496;388497;388498;388499;388500;388501;388502;388503;388504;388505;388506;388507;388508;388509;388510;388511;388512;388513;388514;388515;388516;388517;388518;388519;388520;388521;388522;388523 388433 195 VRAQNSSGVMGGPQK Oxidation (M) 1530.7573 0.75727389 3155 Q86UU0 BCL9L B-cell CLL/lymphoma 9-like protein yes yes 0 1 1 By MS/MS 10 0 1 1 7.4981 7.7413 3 0.012082 4836 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 42.568 33.032 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58068 3155 52176 489789 388524 388524 4775 1 VRAWGPGLEGGVVGK Unmodified 1480.815 0.81504677 1124 P21333 FLNA Filamin-A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 61.263 60.726 3 0.010516 84373 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.69 35.656 311640000 34210000 0 0 6049100 5162100 15759000 13098000 15409000 17149000 19399000 34332000 34525000 13954000 27533000 75062000 58069 1124 52177 489790;489791;489792;489793;489794;489795;489796;489797;489798;489799;489800;489801;489802 388525;388526 388526 1 VRDLQTQLEELQK Unmodified 1598.8628 0.86278482 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 65.842 65.047 3 0.0076453 87117 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 39.068 28.348 90225000 11845000 0 3406200 0 0 6817900 5527500 5100600 5400100 7475400 7707300 9213100 5816800 7482800 14432000 58070 2291 52178 489803;489804;489805;489806;489807;489808;489809;489810;489811;489812;489813;489814 388527;388528;388529 388529 2 VRDTYLDTQVVGQTGVIR Unmodified 2019.0749 0.074902863 136 O00267 SUPT5H Transcription elongation factor SPT5 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 70.804 70.939 3 5.8418E-15 80911 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.146 76.546 86882000 0 0 0 0 2398800 7439000 2700600 3980200 4516200 7508500 9270200 11809000 7562000 7225400 22472000 58071 136 52179 489815;489816;489817;489818;489819;489820;489821;489822;489823;489824;489825 388530;388531;388532;388533;388534;388535;388536;388537;388538;388539 388533 9 VREAFQPQEPDFPPPPPDLEQLR Unmodified 2701.35 0.35001509 1073 P18206 VCL Vinculin yes yes 0 0 1 By MS/MS 10 0 1 1 84.057 84.236 3 2.4923E-08 97410 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.678 56.992 10145000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10145000 58072 1073 52180 489826 388540 388540 1 VREATNDDPWGPSGQLMGEIAK Oxidation (M) 2386.1223 0.12232334 2428 Q14677 CLINT1 Clathrin interactor 1 yes yes 0 1 1 By matching By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 2 2 1 1 66.707 66.777 3 7.5175E-09 76049 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 53.585 45.397 27799000 0 0 0 0 2818700 8316700 0 0 4643100 0 0 0 0 3495400 8524900 58073 2428 52181 489827;489828;489829;489830;489831;489832;489833 388541;388542;388543;388544 388544 3988 3 VREATNDDPWGPSGQLMGEIAK Unmodified 2370.1274 0.12740872 2428 Q14677 CLINT1 Clathrin interactor 1 yes yes 0 0 1 By MS/MS By MS/MS 6 4 1 1 1 1 80.882 79.752 3 7.3357E-10 91592 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.901 62.025 13943000 0 0 1909500 0 0 0 0 0 0 0 0 0 0 0 12033000 58074 2428 52181 489834;489835 388545;388546 388545 2 VREEEIEVDSR Unmodified 1359.663 0.66302238 2458 Q14978 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.423 28.618 3 0.00029043 30323 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 85.522 62.604 902390000 0 0 0 48190000 42092000 56271000 52229000 40932000 44760000 114990000 124890000 117750000 70899000 67760000 121620000 58075 2458 52182 489836;489837;489838;489839;489840;489841;489842;489843;489844;489845;489846;489847 388547;388548;388549;388550;388551;388552;388553;388554;388555;388556;388557;388558;388559;388560;388561;388562;388563 388554 16 VREELIDK Unmodified 1000.5553 0.55530983 1441 P41252 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 22.571 22.88 2 0.018383 23913 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 128 38.445 341200000 0 0 0 0 0 28001000 18842000 0 19750000 42009000 35673000 57288000 40963000 41897000 56776000 58076 1441 52183 489848;489849;489850;489851;489852;489853;489854;489855;489856 388564;388565;388566 388566 0 VREEVPLELVEAHVK Unmodified 1745.9676 0.96758424 3687 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 2 1 2 2 2 2 75.771 75.864 3;4 2.5415E-05 86900 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.85 67.27 146220000 0 0 0 968440 0 23840000 0 0 0 12098000 0 19347000 14505000 13471000 61986000 58077 3687 52184 489857;489858;489859;489860;489861;489862;489863;489864;489865;489866;489867;489868 388567;388568;388569;388570 388570 3 VREFNFEK Unmodified 1067.54 0.53999412 1977 P78347 GTF2I General transcription factor II-I yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.696 37.876 2 0.015917 41980 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 130.56 47.891 865360000 0 0 0 47895000 70787000 83322000 60112000 50122000 47008000 71613000 70367000 93918000 95921000 69651000 104640000 58078 1977 52185 489869;489870;489871;489872;489873;489874;489875;489876;489877;489878;489879;489880 388571;388572;388573;388574 388573 0 VREIIINAVR Unmodified 1181.7244 0.72444085 1301 P31350 RRM2 Ribonucleoside-diphosphate reductase subunit M2 yes yes 0 0 1 By matching By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 51.572 51.803 3 0.03388 57157 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.6 23.791 32270000 0 0 0 0 0 4949900 3474500 0 2786900 9020400 0 0 0 0 12038000 58079 1301 52186 489881;489882;489883;489884;489885 388575 388575 1 VRELAVALAQK Unmodified 1196.7241 0.7241065 2285 Q13421 MSLN Mesothelin;Megakaryocyte-potentiating factor;Mesothelin, cleaved form yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.847 48.01 3 0.029296 54438 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 49.081 34.401 79523000 0 0 0 3829300 4740700 6573800 5508400 6332400 4312000 9189200 5793300 10979000 7407800 5643100 9214300 58080 2285 52187 489886;489887;489888;489889;489890;489891;489892;489893;489894;489895;489896;489897 388576;388577;388578 388576 1 VRELEDMYLK Unmodified 1294.6591 0.65912298 4890 Q9UH65 SWAP70 Switch-associated protein 70 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 55.493 55.682 3 0.013809 63380 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 38.875 29.187 67283000 0 0 0 2729200 0 5812400 3121900 4008800 2722500 4859300 5373300 6455400 3927100 5030300 23243000 58081 4890 52188 489898;489899;489900;489901;489902;489903;489904;489905;489906;489907;489908 388579;388580;388581;388582;388583 388581 5 VRELISDNQYR Unmodified 1391.7157 0.71572665 1183 P25205 MCM3 DNA replication licensing factor MCM3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.896 37.077 3 0.00033497 40901 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 63.691 42.914 274870000 0 0 0 9752200 9863300 23629000 13294000 13718000 13714000 20834000 22676000 34049000 18710000 21993000 72637000 58082 1183 52189 489909;489910;489911;489912;489913;489914;489915;489916;489917;489918;489919;489920 388584;388585;388586;388587;388588;388589;388590;388591;388592;388593;388594;388595 388585 12 VREMEEEAEK Oxidation (M) 1264.5605 0.56053115 3140 Q86U42 PABPN1 Polyadenylate-binding protein 2 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 5.9015 6.0189 3 0.00057984 3752 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 94.616 66.603 57014000 0 0 0 5348600 3195400 2680600 3739000 3647600 2499600 5767900 4866200 8892400 6525900 4313900 5536300 58083 3140 52190 489921;489922;489923;489924;489925;489926;489927;489928;489929;489930;489931;489932 388596;388597;388598;388599;388600;388601 388597 4765 4 VREMEEEAEK Unmodified 1248.5656 0.56561652 3140 Q86U42 PABPN1 Polyadenylate-binding protein 2 yes yes 0 0 1 By MS/MS 10 0 1 1 11.348 11.212 3 0.0011596 10088 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 76.332 60.078 5446100 0 0 0 5446100 0 0 0 0 0 0 0 0 0 0 0 58084 3140 52190 489933 388602;388603 388603 2 VREQLEQELEELTASLFEEAHK Unmodified 2627.3079 0.3078755 3482 Q8TBN0 RAB3IL1 Guanine nucleotide exchange factor for Rab-3A yes yes 0 0 1 By MS/MS 2 0 1 1 101.48 93.346 4 0.003447 120195 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.863 40.881 9444600 9444600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58085 3482 52191 489934 388604 388604 1 VRESNVLHEK Unmodified 1209.6466 0.64658446 4719 Q9NX62 IMPAD1 Inositol monophosphatase 3 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 11.434 11.641 3 0.02879 9574 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.179 19.189 32457000 0 0 0 0 0 0 3660800 3586600 0 4709800 0 5120500 4997200 4110900 6271300 58086 4719 52192 489935;489936;489937;489938;489939;489940;489941 388605;388606;388607 388605 2 VREVAATVHRK Unmodified 1264.7364 0.73640252 3194 Q86XI2 NCAPG2 Condensin-2 complex subunit G2 yes yes 0 0 2 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.3837 7.5109 3 0.043993 4391 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 50.207 25.354 35659000 0 0 0 708060 586710 2316000 1177400 1634900 993220 3224400 6191700 4331700 3038800 3155000 8301100 58087 3194 52193 489942;489943;489944;489945;489946;489947;489948;489949;489950;489951;489952;489953 388608;388609 388609 2 VREVSQPDWTPPPEVTLVLTK Unmodified 2390.2846 0.28456129 982 P13667 PDIA4 Protein disulfide-isomerase A4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS 6.8 3.92 2 3 1 1 1 1 1 89.338 87.291 3 0.00059243 111060 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.509 49.5 43748000 22856000 0 2419800 0 0 0 0 0 0 2944200 0 0 0 1437400 14090000 58088 982 52194 489954;489955;489956;489957;489958 388610;388611;388612;388613;388614;388615 388613 6 VREYLSETYGNK Unmodified 1457.7151 0.71505795 1090 P19484 TFEB Transcription factor EB yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 8.86 2.8 1 6 1 1 1 1 1 1 1 36.416 35.688 2;3 0.01457 38327 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 28.433 13.802 41053000 5641600 0 0 0 2661800 0 0 5756400 0 4201600 0 8065700 0 4789100 9937000 58089 1090 52195 489959;489960;489961;489962;489963;489964;489965 388616;388617 388617 2 VRFADEILESNK Unmodified 1419.7358 0.73579339 589 O94822 LTN1 E3 ubiquitin-protein ligase listerin yes yes 0 0 1 By MS/MS 2 0 1 1 73.027 64.831 2 0.041599 85974 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.763 38.02 14156000 14156000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58090 589 52196 489966 388618 388618 1 VRFCTNESQK Unmodified 1267.5979 0.5979197 4312 Q9H008 LHPP Phospholysine phosphohistidine inorganic pyrophosphate phosphatase yes yes 0 0 1 By MS/MS 2 0 1 1 22.581 17.685 3 0.021113 25331 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.488 53.635 26408000 26408000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58091 4312 52197 489967 388619 388619 0 VRFLEQQNK Unmodified 1160.6302 0.63020611 74;870;66;58;779;67;88;69;80;100;96;51;960;2056;83;53;105;107;81;98 P08670;P04259;CON__H-INV:HIT000292931;CON__P05787;P05787;CON__P50446;CON__Q8BGZ7;CON__Q01546;P12035;CON__P12035;Q01546;CON__P13647;P13647;CON__Q7RTT2;CON__Q8N1N4-2;Q8N1N4;CON__O95678;O95678;CON__P02538;P02538;CON__P04259;CON__Q5XKE5;Q5XKE5;CON__P08729;CON__Q3KNV1;P08729;CON__Q6ISB0;CON__Q9NSB2;Q9NSB2;CON__Q9DCV7;CON__Q6NT21;CON__P78385;P78385 VIM;KRT6B;KRT8;KRT3;KRT76;KRT5;KRT78;KRT75;KRT6A;KRT79;KRT7;KRT84;KRT83 Vimentin;Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 8;Keratin, type II cytoskeletal 3;Keratin, type II cytoskeletal 2 oral;Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 78;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 79;Keratin, type II cytoskeletal 7;Keratin, type II cuticular Hb4;Keratin, type II cuticular Hb3 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 3 24 1 2 2 2 2 2 2 2 2 2 2 2 2 2 28.564 28.321 2;3 3.5631E-14 30368 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 186.76 127.98 + 18752000000 591620000 19628000 0 2080100000 1273800000 1402200000 1442900000 1632000000 1298900000 1382500000 1368300000 1793800000 1636500000 1405600000 1424200000 58092 870;779;51;67;80;105;83;960;2056;74;100;53;58;66;96;69;88;98;107;81 52198 489968;489969;489970;489971;489972;489973;489974;489975;489976;489977;489978;489979;489980;489981;489982;489983;489984;489985;489986;489987;489988;489989;489990;489991;489992;489993;489994 388620;388621;388622;388623;388624;388625;388626;388627;388628;388629;388630;388631;388632;388633;388634;388635;388636;388637;388638;388639;388640;388641;388642;388643;388644;388645;388646;388647;388648;388649 388649 15 VRFLEQQNQVLETK Unmodified 1730.9315 0.93153309 91 CON__Q3SY84;Q3SY84 KRT71 Keratin, type II cytoskeletal 71 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 61 4 3 4 6 5 5 4 6 6 7 6 5 59.285 59.441 2;3 1.2379E-49 65749 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 138.55 128.27 + 1593300000 0 0 0 200610000 44777000 116820000 76591000 244620000 91120000 135160000 124550000 156400000 223580000 78279000 100780000 58093 91 52199 489995;489996;489997;489998;489999;490000;490001;490002;490003;490004;490005;490006;490007;490008;490009;490010;490011;490012;490013;490014;490015;490016;490017;490018;490019;490020;490021;490022;490023;490024;490025;490026;490027;490028;490029;490030;490031;490032;490033;490034;490035;490036;490037;490038;490039;490040;490041;490042;490043;490044;490045;490046;490047;490048;490049;490050;490051;490052;490053;490054;490055 388650;388651;388652;388653;388654;388655;388656;388657;388658;388659;388660;388661;388662;388663;388664;388665;388666;388667;388668;388669;388670;388671;388672;388673;388674;388675;388676;388677;388678;388679;388680;388681;388682;388683;388684;388685;388686;388687;388688;388689;388690;388691;388692;388693;388694;388695;388696;388697;388698;388699;388700;388701;388702;388703;388704;388705;388706;388707;388708;388709;388710;388711;388712;388713;388714;388715;388716;388717;388718 388670 64 VRFLEQQNQVLQTK Unmodified 1729.9475 0.9475175 79;780;103;50;109 CON__ENSEMBL:ENSBTAP00000038253;P04264;CON__P04264;CON__P35908v2;P35908;CON__P35908;CON__Q7Z794;Q7Z794;CON__Q9R0H5 KRT1;KRT2;KRT77 Keratin, type II cytoskeletal 1;Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 1b no no 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.61 1.71 4 1 94 3 1 1 8 3 13 6 12 9 13 7 7 7 6 3 62.5 62.466 2;3 1.1903E-134 65572 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 218.06 184.18 + 53094000000 27083000 2697700 1661300 7494800000 2333700000 5141900000 2663700000 9543400000 2466700000 4674900000 4131300000 6485800000 5118800000 2472600000 534580000 58094 50;780;79;103;109 52200 490056;490057;490058;490059;490060;490061;490062;490063;490064;490065;490066;490067;490068;490069;490070;490071;490072;490073;490074;490075;490076;490077;490078;490079;490080;490081;490082;490083;490084;490085;490086;490087;490088;490089;490090;490091;490092;490093;490094;490095;490096;490097;490098;490099;490100;490101;490102;490103;490104;490105;490106;490107;490108;490109;490110;490111;490112;490113;490114;490115;490116;490117;490118;490119;490120;490121;490122;490123;490124;490125;490126;490127;490128;490129;490130;490131;490132;490133;490134;490135;490136;490137;490138;490139;490140;490141;490142;490143;490144;490145;490146;490147;490148;490149;490150;490151;490152;490153;490154 388719;388720;388721;388722;388723;388724;388725;388726;388727;388728;388729;388730;388731;388732;388733;388734;388735;388736;388737;388738;388739;388740;388741;388742;388743;388744;388745;388746;388747;388748;388749;388750;388751;388752;388753;388754;388755;388756;388757;388758;388759;388760;388761;388762;388763;388764;388765;388766;388767;388768;388769;388770;388771;388772;388773;388774;388775;388776;388777;388778;388779;388780;388781;388782;388783;388784;388785;388786;388787;388788;388789;388790;388791;388792;388793;388794;388795;388796;388797;388798;388799;388800;388801;388802;388803;388804;388805;388806;388807;388808;388809;388810;388811;388812;388813;388814;388815;388816;388817;388818;388819;388820 388768 93 VRFQEAEERPK Unmodified 1387.7208 0.72081203 3633 Q92598 HSPH1 Heat shock protein 105 kDa yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.91 3.42 2 1 8 2 1 1 1 1 1 1 1 1 1 22.584 21.534 3 1.2183E-06 32525 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 125.72 118.84 889400000 723710000 0 2960400 5851300 0 4685200 9387000 0 5800600 0 16889000 92923000 7834000 19359000 0 58095 3633 52201 490155;490156;490157;490158;490159;490160;490161;490162;490163;490164;490165 388821;388822;388823;388824;388825;388826;388827;388828 388824 2 VRGDGSIVYLDGDRTNSR Unmodified 1978.9821 0.98206511 3893 Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 yes yes 0 0 2 By MS/MS 10 0 1 1 43.139 43.404 4 0.010847 47679 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 31.233 22.414 8456900 0 0 0 0 0 0 0 0 0 0 0 0 0 8456900 0 58096 3893 52202 490166 388829 388829 1 VRGDINVLLCGDPGTAK Unmodified 1783.9251 0.9250675 1590 P49736 MCM2 DNA replication licensing factor MCM2 yes yes 0 0 1 By MS/MS By MS/MS 2.2 0.4 4 1 4 1 75.16 68.793 2;3 0.00027986 89887 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.129 56.361 80458000 77814000 0 2643300 0 0 0 0 0 0 0 0 0 0 0 0 58097 1590 52203 490167;490168;490169;490170;490171 388830;388831;388832;388833;388834 388831 4 VRGEGPGEAGGPLTPR Unmodified 1548.8009 0.80085327 1628 P50548 ERF ETS domain-containing transcription factor ERF yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 33.025 33.209 2;3 1.7966E-27 36050 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 107.03 99.114 1080600000 0 0 0 71140000 56646000 69727000 77857000 104500000 58523000 102400000 111240000 143550000 88099000 82067000 114860000 58098 1628 52204 490172;490173;490174;490175;490176;490177;490178;490179;490180;490181;490182;490183;490184;490185;490186;490187;490188;490189;490190;490191;490192;490193;490194;490195 388835;388836;388837;388838;388839;388840;388841;388842;388843;388844;388845;388846;388847;388848;388849;388850;388851;388852;388853;388854 388845 17 VRGEVAPDAK Unmodified 1040.5615 0.56145784 881 P09382 LGALS1 Galectin-1 yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 8.8464 8.9544 2 0.043718 6815 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.692 58.297 20391000 0 0 0 0 886060 583360 1282700 629270 880560 0 0 0 0 1527900 14602000 58099 881 52205 490196;490197;490198;490199;490200;490201;490202 388855 388855 1 VRGLPWSCSADEVQR Unmodified 1758.8472 0.84715153 1309 P31943 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 60.207 60.308 3 8.3795E-06 68469 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 79.652 67.506 227300000 0 0 0 8280800 3397000 12408000 8912500 8306700 23013000 0 23480000 38682000 21512000 19453000 59852000 58100 1309 52206 490203;490204;490205;490206;490207;490208;490209;490210;490211;490212;490213 388856;388857;388858;388859;388860;388861;388862;388863;388864;388865;388866;388867 388861 10 VRGSEIPK Unmodified 884.50797 0.50796571 4031 Q99598 TSNAX Translin-associated protein X yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 14.704 11.459 2 0.025183 16692 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.59 20.012 539620000 449590000 40345000 49689000 0 0 0 0 0 0 0 0 0 0 0 0 58101 4031 52207 490214;490215;490216 388868 388868 0 VRGVSSESSGDREK Unmodified 1491.7277 0.7277479 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 5.8662 5.9836 3 3.5678E-18 3625 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 133.66 120.68 557850000 0 0 0 36864000 25462000 32590000 48535000 31244000 39632000 55431000 30194000 76333000 43208000 53981000 84373000 58102 2290 52208 490217;490218;490219;490220;490221;490222;490223;490224;490225;490226;490227;490228 388869;388870;388871;388872;388873;388874;388875;388876;388877;388878;388879;388880;388881;388882 388870 13 VRHAQSGTIMAVK Unmodified 1396.7609 0.76090271 1505 P46734 MAP2K3 Dual specificity mitogen-activated protein kinase kinase 3 yes yes 0 0 1 By MS/MS 10 0 1 1 20.167 20.786 3 0.0014353 20418 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.04 53.697 18500000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18500000 58103 1505 52209 490229 388883 388883 1 VRHQGDLSSGYLDDTK Unmodified 1789.8595 0.85949036 186 O14545 TRAFD1 TRAF-type zinc finger domain-containing protein 1 yes yes 0 0 1 By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 34.307 34.475 3 0.025588 36987 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 37.042 30.837 54842000 0 0 0 2011200 1226400 4430300 0 0 3074100 5065100 0 14676000 4380200 8596300 11382000 58104 186 52210 490230;490231;490232;490233;490234;490235;490236;490237;490238 388884 388884 0 VRIDEYDYSK Unmodified 1286.6143 0.61428128 1293 P31040 SDHA Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes yes 0 0 1 By matching By matching By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 38.326 38.75 3 0.019599 41852 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 34.773 29.048 25998000 0 0 0 0 0 0 0 0 1432300 2935500 0 5205200 2245600 0 14180000 58105 1293 52211 490239;490240;490241;490242;490243 388885 388885 1 VRIDQYQGADAVGLEEK Unmodified 1889.9483 0.94830537 324 O43396 TXNL1 Thioredoxin-like protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.38 3.91 5 1 7 1 3 2 1 1 1 1 1 1 1 61.468 58.929 2;3 9.6941E-08 66514 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.499 68.863 437410000 36573000 171150000 133750000 0 0 0 2779900 0 0 5396900 18625000 17050000 0 13576000 38507000 58106 324 52212 490244;490245;490246;490247;490248;490249;490250;490251;490252;490253;490254;490255;490256 388886;388887;388888;388889;388890;388891;388892;388893;388894;388895;388896;388897 388890 12 VRIFDSPEELPK Unmodified 1428.7613 0.76127986 1364 P35658 NUP214 Nuclear pore complex protein Nup214 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 67.766 66.66 3 1.5889E-05 75392 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 81.92 73.19 410960000 139930000 31963000 0 12902000 8462000 17824000 13432000 23190000 18017000 20879000 20674000 26175000 21429000 21661000 34424000 58107 1364 52213 490257;490258;490259;490260;490261;490262;490263;490264;490265;490266;490267;490268;490269;490270;490271 388898;388899;388900;388901;388902;388903;388904;388905;388906;388907;388908;388909;388910;388911;388912 388903 15 VRIMGPNYTPGK Oxidation (M) 1347.6969 0.69690547 980 P13639 EEF2 Elongation factor 2 yes yes 0 1 1 By MS/MS 2 0 1 1 44.278 37.413 3 1.127E-05 51574 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.09 97.58 70014000 70014000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58108 980 52214 490272 388913;388914 388914 1310 2 VRINLQQQPPPLQIK Unmodified 1771.0468 0.046837619 592 O94842 TOX4 TOX high mobility group box family member 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 73.032 73.206 3 0.0084998 84647 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 36.445 35.709 137290000 0 0 0 0 0 9936800 5195900 15577000 14183000 12348000 11980000 19569000 9985000 14680000 23838000 58109 592 52215 490273;490274;490275;490276;490277;490278;490279;490280;490281;490282 388915;388916;388917;388918;388919;388920 388920 5 VRIQETQAELPR Unmodified 1438.7892 0.78922595 2415 Q14566 MCM6 DNA replication licensing factor MCM6 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 43.875 44.055 3 5.5177E-12 48155 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 134.49 107.08 173590000 0 0 0 0 9058300 14690000 14091000 16529000 17864000 16510000 15500000 0 10552000 0 58792000 58110 2415 52216 490283;490284;490285;490286;490287;490288;490289;490290;490291;490292;490293 388921;388922;388923;388924;388925;388926;388927;388928;388929;388930;388931 388923 10 VRLAEAEETAR Unmodified 1243.6521 0.65206377 3308 Q8N163 CCAR2 Cell cycle and apoptosis regulator protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 2 1 1 1 1 25.724 25.887 3 0.010162 27592 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 50.354 34.724 70168000 0 0 0 0 7578100 10194000 10133000 0 9607900 0 8206700 8805700 15643000 0 0 58111 3308 52217 490294;490295;490296;490297;490298;490299;490300;490301 388932;388933;388934;388935;388936 388934 2 VRLLADPTGAFGK Unmodified 1343.7561 0.75613491 1263 P30044 PRDX5 Peroxiredoxin-5, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 6.62 3.84 5 2 9 4 2 1 1 1 1 1 1 1 1 1 1 71.639 69.933 2;3 3.4309E-07 92268 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 124.6 105.25 225010000 167090000 19265000 66806 0 1980800 1980600 0 2862700 6618100 1870600 5445400 3946900 0 2281800 11599000 58112 1263 52218 490302;490303;490304;490305;490306;490307;490308;490309;490310;490311;490312;490313;490314;490315;490316;490317 388937;388938;388939;388940 388940 3 VRLLIDEAILK Unmodified 1281.802 0.80202247 1580 P49591 SARS Serine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS 2 0 1 1 89.213 81.083 3 0.0052624 105336 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.842 54.916 17956000 17956000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58113 1580 52219 490318 388941 388941 1 VRLPVDDSTGK Unmodified 1185.6354 0.63535107 4215 Q9BWU0 SLC4A1AP Kanadaptin yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS 10 0 5 1 1 1 1 1 36.399 36.301 3 0.0098405 40461 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 36.417 17.285 35872000 0 0 0 4516600 5551100 7386600 0 0 4362100 0 0 0 0 14056000 0 58114 4215 52220 490319;490320;490321;490322;490323 388942;388943 388943 1 VRLQDLSSCITQGK Unmodified 1603.8352 0.83518986 1253 P29590 PML Protein PML yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 65.099 65.181 3 0.020273 74645 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 31.914 27.199 50480000 0 0 0 2345300 1747000 3025000 2430700 2238000 4403400 3843900 6131900 10373000 0 5505500 8436500 58115 1253 52221 490324;490325;490326;490327;490328;490329;490330;490331;490332;490333;490334 388944;388945 388945 2 VRLSPEPWTPETGLVTDAFK Unmodified 2242.1634 0.16338352 403 O60488 ACSL4 Long-chain-fatty-acid--CoA ligase 4 yes yes 0 0 1 By MS/MS 2 0 1 1 93.658 85.528 3 0.00053758 110684 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.953 37.789 24007000 24007000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58116 403 52222 490335 388946 388946 1 VRNHYNEEMSNLR Unmodified 1660.774 0.77398659 1029 P15924 DSP Desmoplakin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 28.021 28.272 3 1.9383E-05 30467 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 89.747 82.689 75835000 0 0 0 0 0 9285000 3440600 22447000 3529700 9553100 3156500 15560000 8863100 0 0 58117 1029 52223 490336;490337;490338;490339;490340;490341;490342;490343 388947;388948;388949 388948 3 VRNHYNEEMSNLR Oxidation (M) 1676.7689 0.76890121 1029 P15924 DSP Desmoplakin yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 17 1 1 2 2 1 2 2 1 2 1 2 14.148 14.348 3;4 0.00039351 13983 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 64.65 59.555 116870000 0 0 0 12196000 4184900 7929500 0 25451000 4129400 12382000 10148000 7493400 17132000 4726900 11095000 58118 1029 52223 490344;490345;490346;490347;490348;490349;490350;490351;490352;490353;490354;490355;490356;490357;490358;490359;490360 388950;388951;388952 388952 1438 2 VRNNYDEEIISLK Unmodified 1591.8206 0.82058566 1029 P15924 DSP Desmoplakin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.27 2.3 2 20 1 1 2 1 2 2 2 2 2 2 2 1 1 1 62.445 61.989 2;3 2.5443E-11 70612 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 143.97 88.993 372460000 15937000 0 11856000 45114000 2954000 26714000 16679000 80518000 22128000 25897000 32276000 58920000 7930500 5021500 20517000 58119 1029 52224 490361;490362;490363;490364;490365;490366;490367;490368;490369;490370;490371;490372;490373;490374;490375;490376;490377;490378;490379;490380;490381;490382 388953;388954;388955;388956;388957;388958;388959;388960;388961;388962;388963;388964;388965;388966;388967;388968;388969 388961 15 VRPAELEQFESTIGFK Unmodified 1849.9574 0.95741349 334 O43491 EPB41L2 Band 4.1-like protein 2 yes yes 0 0 1 By MS/MS 2 0 1 1 89.364 81.233 3 0.0013575 105589 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 59.261 51.799 4503200 4503200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58120 334 52225 490383 388970 388970 1 VRPASTGGLSLLPPPPGGK Unmodified 1800.0258 0.025767826 4688 Q9NVZ3 NECAP2 Adaptin ear-binding coat-associated protein 2 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.016 72.085 3 0.00165 83374 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 39.523 32.953 60550000 0 0 0 4410500 1658000 6598700 4503000 5003200 3198500 6541900 5034100 6952500 4108000 3727600 8813700 58121 4688 52226 490384;490385;490386;490387;490388;490389;490390;490391;490392;490393;490394;490395 388971;388972;388973;388974;388975;388976;388977;388978;388979;388980;388981 388979 10 VRPAYSLEPR Unmodified 1186.6459 0.64585618 3997 Q96T37 RBM15 Putative RNA-binding protein 15 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 37.11 37.239 3 0.016361 41276 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 57.149 40.906 110350000 0 0 0 6358100 6490600 7743600 8479400 11190000 5903200 12838000 11907000 0 13907000 10681000 14855000 58122 3997 52227 490396;490397;490398;490399;490400;490401;490402;490403;490404;490405;490406 388982;388983;388984;388985;388986;388987;388988 388982 5 VRPCVVYGGADIGQQIR Unmodified 1886.9785 0.97850006 170 O00571;O15523 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 63.169 63.427 3 4.2158E-08 71683 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 67.685 51.191 11646000 0 0 0 0 0 0 0 0 0 0 5602800 0 6043500 0 0 58123 170 52228 490407;490408;490409;490410;490411 388989;388990;388991;388992;388993 388992 5 VRPDYTAQNLDHGK Unmodified 1612.7958 0.79576789 2002 P82930 MRPS34 28S ribosomal protein S34, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.515 26.715 3 2.0779E-05 28723 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 85.909 85.909 102890000 0 0 0 7894800 6947100 7995600 6890400 6455700 4215700 10427000 9322300 15781000 8863900 6608800 11483000 58124 2002 52229 490412;490413;490414;490415;490416;490417;490418;490419;490420;490421;490422;490423 388994;388995;388996;388997;388998;388999;389000;389001;389002;389003;389004;389005 388995 11 VRPSTGNSASTPQSQCLPSEIEVK Unmodified 2571.2599 0.25987945 4944 Q9UJX3 ANAPC7 Anaphase-promoting complex subunit 7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58.197 57.438 3 4.1671E-82 65144 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 148.2 134.88 579770000 181910000 0 23663000 18945000 20027000 32418000 24879000 22213000 26703000 34774000 29467000 47117000 33524000 36613000 47524000 58125 4944 52230 490424;490425;490426;490427;490428;490429;490430;490431;490432;490433;490434;490435;490436;490437 389006;389007;389008;389009;389010;389011;389012;389013;389014;389015;389016;389017;389018;389019;389020;389021;389022;389023;389024;389025 389014 20 VRPVLPGEPTPPPGLLLFPSGPGGPSDPPTR Unmodified 3100.671 0.6709553 4199 Q9BW19 KIFC1 Kinesin-like protein KIFC1 yes yes 0 0 1 By MS/MS 10 0 1 1 91.881 92.018 3 1.8595E-05 106583 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 30.602 28.673 2306600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2306600 58126 4199 52231 490438 389026 389026 1 VRQASVADYEETVK Unmodified 1593.7999 0.79985021 1573 P49419 ALDH7A1 Alpha-aminoadipic semialdehyde dehydrogenase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 6 4 2 2 1 1 1 1 42.655 40.042 3 0.018798 43592 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.715 22.23 33122000 7538300 0 10633000 0 0 0 0 0 0 0 0 0 0 3814900 11135000 58127 1573 52232 490439;490440;490441;490442 389027;389028 389027 2 VRQEESEQIK Unmodified 1244.6361 0.63607935 69;88 CON__P08729;CON__Q3KNV1;P08729 KRT7 Keratin, type II cytoskeletal 7 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 8.6393 8.7675 2;3 7.6715E-07 6663 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 133.81 88.44 + 857460000 0 0 0 57142000 50623000 46498000 61000000 37300000 41554000 66891000 179050000 116840000 81272000 53911000 65379000 58128 69;88 52233 490443;490444;490445;490446;490447;490448;490449;490450;490451;490452;490453;490454;490455;490456;490457;490458;490459;490460;490461;490462;490463;490464;490465;490466 389029;389030;389031;389032;389033;389034;389035;389036;389037;389038;389039;389040;389041;389042;389043;389044 389034 7 VRQEVAAAALR Unmodified 1182.6833 0.68330431 3938 Q96NU1 SAMD11 Sterile alpha motif domain-containing protein 11 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 7 1 1 1 1 1 1 1 29.809 30.115 3 0.0053924 32761 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 43.544 23.337 37223000 0 0 0 0 0 0 6184400 0 3047100 5090000 3815700 0 7080300 5844800 6160600 58129 3938 52234 490467;490468;490469;490470;490471;490472;490473 389045;389046;389047;389048 389047 4 VRQLVEQVEQIQK Unmodified 1595.8995 0.89950468 4191 Q9BVK6 TMED9 Transmembrane emp24 domain-containing protein 9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 54.468 54.736 3 0.016172 61898 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 36.631 29.341 55791000 0 0 0 0 0 7114300 0 5729900 5529100 8978700 5847300 0 0 0 22592000 58130 4191 52235 490474;490475;490476;490477;490478;490479 389049;389050;389051 389049 3 VRQMQNTGESEASGNK Unmodified 1734.7955 0.79550989 224 O14879 IFIT3 Interferon-induced protein with tetratricopeptide repeats 3 yes yes 0 0 1 By MS/MS By matching 2 0 2 1 1 11.81 8.7124 3 0.00024481 13384 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.525 47.453 14878000 13142000 0 1735800 0 0 0 0 0 0 0 0 0 0 0 0 58131 224 52236 490480;490481 389052 389052 1 VRQQAADLISR Unmodified 1255.6997 0.69968266 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 31.077 31.266 2;3 3.31E-08 34354 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 160.77 113.57 987110000 0 0 0 36836000 45841000 80765000 66881000 67221000 48134000 81634000 101580000 148740000 73814000 92929000 142730000 58132 516 52237 490482;490483;490484;490485;490486;490487;490488;490489;490490;490491;490492;490493;490494;490495;490496;490497;490498;490499;490500;490501;490502;490503;490504;490505 389053;389054;389055;389056;389057;389058;389059;389060;389061;389062;389063;389064;389065;389066;389067;389068;389069 389054 9 VRQQFHDAK Unmodified 1127.5836 0.58359027 1209 P26639 TARS Threonine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS 2 0 1 1 7.9451 4.43 2 0.0031267 7659 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 178.27 143.87 305800000 305800000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58133 1209 52238 490506 389070 389070 0 VRQTQVNEATK Unmodified 1272.6786 0.67861287 3579 Q8WWY3 PRPF31 U4/U6 small nuclear ribonucleoprotein Prp31 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 25 2 2 2 2 2 2 2 2 2 2 3 2 7.1054 7.2338 2;3 0.0089288 5224 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 63.864 50.463 340070000 0 0 0 17637000 15903000 20494000 23485000 20553000 23098000 28147000 49651000 26027000 38106000 37731000 39234000 58134 3579 52239 490507;490508;490509;490510;490511;490512;490513;490514;490515;490516;490517;490518;490519;490520;490521;490522;490523;490524;490525;490526;490527;490528;490529;490530;490531 389071;389072;389073;389074;389075;389076 389076 2 VRTDGHTLSEK Unmodified 1241.6364 0.6364137 4779 Q9NZN8 CNOT2 CCR4-NOT transcription complex subunit 2 yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 17.879 17.498 2;3 0.0044478 14331 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.229 49.032 40837000 7407500 0 0 4313500 5821500 0 0 0 0 0 4992400 0 4955400 4061900 9284900 58135 4779 52240 490532;490533;490534;490535;490536;490537;490538 389077;389078 389077 2 VRTDITYPAGFMDVISIDK Unmodified 2140.0874 0.087441384 1905 P62701 RPS4X 40S ribosomal protein S4, X isoform yes yes 0 0 1 By MS/MS 10 0 1 1 89.85 89.989 3 0.02207 104161 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 25.496 19.916 2453500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2453500 58136 1905 52241 490539 389079 389079 1 VRTDITYPAGFMDVISIDK Oxidation (M) 2156.0824 0.082356006 1905 P62701 RPS4X 40S ribosomal protein S4, X isoform yes yes 0 1 1 By MS/MS 10 0 1 1 83.483 83.673 3 8.6497E-05 96679 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.181 55.471 23270000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23270000 58137 1905 52241 490540 389080 389080 3081 0 VRTEEREQIK Unmodified 1286.6943 0.69426293 74;77;80 CON__P50446;CON__P13647;P13647;CON__P19013;P19013 KRT5;KRT4 Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 4 no no 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.1049 7.2285 3 0.0048285 5066 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 106.62 68.922 + 10656000000 0 0 0 1902500000 360250000 497550000 536440000 1788800000 491970000 800480000 1192200000 886190000 1369200000 433200000 397390000 58138 80;74;77 52242 490541;490542;490543;490544;490545;490546;490547;490548;490549;490550;490551;490552 389081;389082;389083;389084;389085;389086;389087;389088;389089;389090;389091;389092 389087 12 VRTELADK Unmodified 930.51345 0.51344502 1356 P35579 MYH9 Myosin-9 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 10.633 10.777 2 0.041595 8407 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 120.15 48.775 751240000 0 0 0 1146500 60035000 70282000 108290000 47746000 59529000 43293000 1925400 118660000 78692000 68437000 93202000 58139 1356 52243 490553;490554;490555;490556;490557;490558;490559;490560;490561;490562;490563;490564 389093 389093 0 VRVHGPGIQSGTTNK Unmodified 1549.8325 0.83248775 1124 P21333 FLNA Filamin-A yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 18.447 18.711 3 0.032994 19208 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 28.351 16.206 29411000 0 0 0 1222200 0 5129000 0 0 2566800 2745400 2725900 2739300 2827100 1770900 7684800 58140 1124 52244 490565;490566;490567;490568;490569;490570;490571;490572;490573 389094;389095 389094 2 VRVHGPGIQSGTTNKPNK Unmodified 1889.0231 0.023142064 1124 P21333 FLNA Filamin-A yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.238 18.421 4 0.013174 19481 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 30.767 24.499 157030000 0 0 0 6620100 4011400 16687000 10597000 9174300 10779000 13483000 8821300 23178000 8963800 9785500 34933000 58141 1124 52245 490574;490575;490576;490577;490578;490579;490580;490581;490582;490583;490584;490585 389096;389097;389098 389097 3 VRVMADSMQEK Unmodified 1292.6217 0.62169161 1584 P49662 CASP4 Caspase-4;Caspase-4 subunit 1;Caspase-4 subunit 2 yes yes 0 0 1 By MS/MS 2 0 1 1 34.619 28.387 3 0.006372 39940 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.822 37.091 17590000 17590000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58142 1584 52246 490586 389099 389099 1 VRYDSSNQVK Unmodified 1194.5993 0.59929991 707 O95983 MBD3 Methyl-CpG-binding domain protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 10.603 10.744 3 0.0020969 9215 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 77.662 59.997 139290000 0 0 0 7455500 7263700 8323000 15346000 7561600 8518200 12717000 19459000 18240000 12290000 10355000 11760000 58143 707 52247 490587;490588;490589;490590;490591;490592;490593;490594;490595;490596;490597;490598 389100;389101;389102;389103;389104;389105;389106;389107 389106 5 VRYMSSTDAK Unmodified 1156.5547 0.55465791 4387 Q9H3U1 UNC45A Protein unc-45 homolog A yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 17.676 14.184 3 0.0015436 21030 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.261 75.825 163930000 161660000 0 2275000 0 0 0 0 0 0 0 0 0 0 0 0 58144 4387 52248 490599;490600 389108;389109;389110 389109 3 VRYSLDPENPTK Unmodified 1417.7201 0.72014333 1076 P18621 RPL17 60S ribosomal protein L17 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.76 2.85 3 1 21 1 2 1 2 2 1 2 2 2 2 2 1 2 2 1 44.096 43.305 2;3 6.3744E-22 47460 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 148.76 116.44 4602800000 1028500000 97554000 76240000 178210000 211890000 170760000 239860000 250120000 228700000 339160000 412110000 364490000 387240000 321530000 296420000 58145 1076 52249 490601;490602;490603;490604;490605;490606;490607;490608;490609;490610;490611;490612;490613;490614;490615;490616;490617;490618;490619;490620;490621;490622;490623;490624;490625 389111;389112;389113;389114;389115;389116;389117;389118;389119;389120;389121;389122;389123;389124;389125;389126;389127;389128;389129;389130;389131;389132;389133;389134 389130 18 VSAARPNDLDGK Unmodified 1241.6364 0.6364137 2970 Q6T4R5 NHS Nance-Horan syndrome protein yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 10.598 10.704 3 0.027308 19540 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 28.053 9.9168 22824000 0 0 0 2768000 0 5215600 3096300 0 0 0 0 0 3449900 3326500 4967600 58146 2970 52250 490626;490627;490628;490629;490630;490631 389135;389136 389135 2 VSAAVLPLVHPLPEGLR Unmodified 1767.0407 0.040689608 488 O75376 NCOR1 Nuclear receptor corepressor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 84.919 85.062 3 0.00030015 98263 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.246 58.11 60352000 0 0 0 0 0 6641400 0 8623400 4712300 6808500 5638300 6487100 0 3569700 17871000 58147 488 52251 490632;490633;490634;490635;490636;490637;490638;490639 389137;389138;389139;389140;389141 389138 5 VSADAAPDCPETSNQTPPGPGAAAGPGID Unmodified 2719.2032 0.20315244 4727 Q9NXH9 TRMT1 tRNA (guanine(26)-N(2))-dimethyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 64.243 64.612 3 0.041974 72986 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 16.27 15.088 21120000 0 0 0 0 0 0 0 0 0 0 6081100 0 0 5185400 9853100 58148 4727 52252 490640;490641;490642 389142 389142 1 VSADEDLK Unmodified 875.42363 0.42362696 5032 Q9UNH7 SNX6 Sorting nexin-6;Sorting nexin-6, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 16.818 16.999 2 0.0099634 17034 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 81.191 24.644 146050000 0 0 0 22037000 6794800 15679000 9764100 0 9956400 11106000 15074000 15770000 11978000 11673000 16217000 58149 5032 52253 490643;490644;490645;490646;490647;490648;490649;490650;490651;490652;490653 389143;389144;389145;389146 389143 3 VSADNTVGR Unmodified 917.45666 0.45665842 141 O00303 EIF3F Eukaryotic translation initiation factor 3 subunit F yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 10.22 10.359 2 0.0021081 9501 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 128.61 80.865 125490000 0 0 0 7131700 4940900 11309000 8455400 7548400 3712000 0 18701000 14250000 13947000 11840000 23657000 58150 141 52254 490654;490655;490656;490657;490658;490659;490660;490661;490662;490663;490664 389147;389148;389149;389150;389151;389152;389153;389154;389155;389156 389147 4 VSAEAVTTTLHQVTR Unmodified 1611.858 0.8580338 4947 Q9UJX6 ANAPC2 Anaphase-promoting complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.43 63.523 3 0.0002367 71783 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 65.231 52.739 181710000 0 0 0 7326800 9953300 10500000 11087000 10242000 7919300 16291000 16166000 27401000 15680000 19413000 29728000 58151 4947 52255 490665;490666;490667;490668;490669;490670;490671;490672;490673;490674;490675;490676 389157;389158;389159;389160;389161;389162;389163;389164;389165;389166;389167;389168;389169;389170;389171;389172;389173 389168 17 VSAENLQK Unmodified 887.47125 0.47124585 417 O60610 DIAPH1 Protein diaphanous homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 15.749 15.952 2 0.020127 15410 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 63.054 6.7841 567210000 0 0 0 32205000 0 48219000 36014000 3990200 22882000 65953000 67711000 80520000 82050000 63000000 64661000 58152 417 52256 490677;490678;490679;490680;490681;490682;490683;490684;490685;490686;490687 389174;389175;389176;389177 389176 3 VSAIASEGK Unmodified 860.46035 0.46034682 3580 Q8WX92 NELFB Negative elongation factor B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.078 13.232 2 0.017596 12280 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 96.027 62.669 132690000 0 0 0 7495900 6848700 8262000 7393400 7141300 4768800 16552000 16002000 15210000 14705000 6846700 21460000 58153 3580 52257 490688;490689;490690;490691;490692;490693;490694;490695;490696;490697;490698;490699 389178;389179;389180;389181;389182;389183;389184;389185 389185 1 VSALDLAVLDQVEAR Unmodified 1597.8675 0.86753585 2317 Q13561 DCTN2 Dynactin subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 89.434 89.575 2 0.00019146 103682 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.864 55.706 11634000 0 0 0 0 0 0 0 0 0 2808000 2518100 0 0 1488500 4819200 58154 2317 52258 490700;490701;490702;490703 389186;389187;389188;389189 389187 4 VSALDLAVLDQVEARLQSVLGK Unmodified 2323.3111 0.31111039 2317 Q13561 DCTN2 Dynactin subunit 2 yes yes 0 0 1 By MS/MS 3 0 1 1 102.18 98.626 3 0.0036538 118553 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 37.112 33.449 772880 0 772880 0 0 0 0 0 0 0 0 0 0 0 0 0 58155 2317 52259 490704 389190;389191 389190 2 VSALMQPSQK Oxidation (M) 1103.5645 0.56449431 2854 Q68CZ2 TNS3 Tensin-3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 21.409 20.742 2 0.0038187 21787 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 67.507 31.126 63497000 0 35695000 0 0 2499500 3498900 3721100 3402300 2803300 3354700 4109000 0 0 0 4413400 58156 2854 52260 490705;490706;490707;490708;490709;490710;490711;490712;490713;490714 389192;389193;389194;389195;389196;389197;389198;389199;389200;389201 389193 4514 9 VSALMQPSQK Unmodified 1087.5696 0.56957969 2854 Q68CZ2 TNS3 Tensin-3 yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 31.642 31.229 2 0.0062851 39905 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.358 40.494 78338000 0 44989000 0 0 2961500 0 4856300 3924900 0 4063300 5154400 0 3824200 0 8564500 58157 2854 52260 490715;490716;490717;490718;490719;490720;490721;490722 389202;389203 389202 2 VSALPVVDEK Unmodified 1055.5863 0.58627561 1742 P54619 PRKAG1 5'-AMP-activated protein kinase subunit gamma-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 52.106 52.275 2 0.024578 58974 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 44.863 14.788 75949000 0 0 0 0 0 14863000 0 17200000 0 25585000 0 0 18302000 0 0 58158 1742 52261 490723;490724;490725;490726 389204;389205 389205 2 VSANSVYGFTGAQVGK Unmodified 1583.7944 0.79437091 1234 P28340 POLD1 DNA polymerase delta catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 65.708 64.525 2 2.1992E-10 74060 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 126.34 116.11 351700000 11892000 108000000 0 10873000 11630000 22309000 14188000 17968000 12856000 19642000 21400000 23618000 20548000 19700000 37082000 58159 1234 52262 490727;490728;490729;490730;490731;490732;490733;490734;490735;490736;490737;490738;490739;490740;490741 389206;389207;389208;389209;389210;389211;389212;389213;389214;389215;389216;389217;389218;389219;389220;389221;389222 389208 17 VSAPEVSVGHK Unmodified 1108.5877 0.58767259 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 29.812 30.05 2 0.00029522 31206 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 103.19 68.806 107770000 0 0 0 0 4307000 5417700 7507200 8686900 5641600 8309500 9339100 14696000 15743000 9384100 18743000 58160 2172 52263 490742;490743;490744;490745;490746;490747;490748;490749;490750;490751;490752 389223;389224;389225;389226;389227;389228;389229;389230;389231;389232 389225 10 VSAPGVLTAQDR Unmodified 1212.6463 0.64625011 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.292 47.456 2 3.1585E-08 52811 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 128.91 101.79 623780000 0 0 0 31305000 35878000 39667000 42437000 38023000 31796000 60331000 74805000 73022000 54953000 52908000 88654000 58161 4285 52264 490753;490754;490755;490756;490757;490758;490759;490760;490761;490762;490763;490764 389233;389234;389235;389236;389237;389238;389239;389240;389241;389242;389243;389244 389242 12 VSAPGVLTAQDRVVGK Unmodified 1595.8995 0.89950468 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56.436 55.685 3 0.0041734 75713 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.591 44.183 100760000 26574000 0 1716200 3153300 2702200 4754400 4488900 4435400 6923100 4818200 7909400 9792200 5588600 4804400 13095000 58162 4285 52265 490765;490766;490767;490768;490769;490770;490771;490772;490773;490774;490775;490776;490777;490778 389245;389246 389246 2 VSAPGVQGDVK Unmodified 1055.5611 0.56112349 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 30.483 29.904 2 1.0479E-05 32628 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 129.38 96.542 738940000 0 123900000 0 34002000 36667000 37333000 57537000 52920000 40130000 57201000 56755000 81712000 88257000 72531000 0 58163 2172 52266 490779;490780;490781;490782;490783;490784;490785;490786;490787;490788;490789;490790;490791 389247;389248;389249;389250;389251;389252;389253;389254;389255;389256;389257;389258;389259;389260;389261 389253 13 VSAPNLLNVK Unmodified 1053.6182 0.61824444 410 O60524 NEMF Nuclear export mediator factor NEMF yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 72.875 66.786 2 0.00049051 85298 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.1 72.137 161370000 47171000 114200000 0 0 0 0 0 0 0 0 0 0 0 0 0 58164 410 52267 490792;490793;490794 389262;389263;389264 389262 2 VSAQEVRK Unmodified 915.51378 0.51377937 1017 P15311 EZR Ezrin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 3.8 3.12 3 1 1 1 2 1 1 8.0558 5.6283 2 0.0192 7034 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 122.74 23.367 1539600000 296440000 435870000 793020000 0 0 0 0 0 0 0 0 0 0 0 14314000 58165 1017 52268 490795;490796;490797;490798;490799 389265;389266;389267;389268;389269 389269 2 VSAQGITLTDNQR Unmodified 1401.7212 0.72120596 2854 Q68CZ2;Q63HR2;Q9HBL0 TNS3;TNS2;TNS1 Tensin-3;Tensin-2;Tensin-1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 46.147 46.466 2 0.028462 52273 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 44.299 19.446 15907000 0 0 0 0 0 3100300 0 0 0 6220400 0 0 0 0 6586200 58166 2854 52269 490800;490801;490802 389270 389270 1 VSAQGITLTDNQRK Unmodified 1529.8162 0.81616898 2854 Q68CZ2;Q63HR2;Q9HBL0 TNS3;TNS2;TNS1 Tensin-3;Tensin-2;Tensin-1 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 37.797 37.194 3 0.00016007 40083 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 69.314 55.351 162980000 30310000 0 13472000 6855800 0 11925000 9476200 10805000 6200400 10823000 8638400 13122000 9207800 12065000 20083000 58167 2854 52270 490803;490804;490805;490806;490807;490808;490809;490810;490811;490812;490813;490814;490815 389271;389272;389273;389274;389275;389276;389277;389278;389279;389280;389281;389282;389283;389284;389285 389282 15 VSAQYLSEIEMAK Unmodified 1467.7279 0.72793082 565 O75955 FLOT1 Flotillin-1 yes yes 0 0 0 By MS/MS 2 0 2 2 79.878 75.166 2 0.0045594 93598 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.124 49.352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58168 565 52271 490816;490817 389286;389287 389286 2 VSASPLLYTLIEK Unmodified 1432.8177 0.81773211 762 P02786 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90.855 90.105 2 1.4969E-11 104418 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 120.96 105.33 185550000 61450000 1921400 0 2577400 7627200 8384100 8049200 10875000 7925800 16281000 13388000 13951000 6044700 8658800 18412000 58169 762 52272 490818;490819;490820;490821;490822;490823;490824;490825;490826;490827;490828;490829;490830;490831 389288;389289;389290;389291;389292;389293;389294;389295;389296;389297;389298;389299;389300;389301 389291 14 VSASSPSLAVASQSDSK Unmodified 1619.8002 0.80024414 775 P04150 NR3C1 Glucocorticoid receptor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 42.556 41.982 2 2.844E-06 46008 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 78.486 60.677 507550000 0 30260000 0 24986000 23573000 38483000 34627000 35451000 31489000 52386000 51972000 49845000 44247000 30391000 59840000 58170 775 52273 490832;490833;490834;490835;490836;490837;490838;490839;490840;490841;490842;490843;490844;490845 389302;389303;389304;389305;389306 389305 5 VSASVAEVQEQYTER Unmodified 1694.8111 0.81114318 2646 Q27J81 INF2 Inverted formin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 54.095 54.23 2 6.8615E-31 62033 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 185.25 171.9 258440000 0 0 0 23042000 22241000 17169000 16427000 17036000 18539000 20328000 30014000 26486000 18849000 16149000 32158000 58171 2646 52274 490846;490847;490848;490849;490850;490851;490852;490853;490854;490855;490856;490857 389307;389308;389309;389310;389311;389312;389313;389314;389315;389316;389317;389318;389319;389320;389321 389318 14 VSAVPTNMAAK Unmodified 1087.5696 0.56957969 3913 Q96KR1 ZFR Zinc finger RNA-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.43 2.06 1 13 1 1 1 1 1 2 1 1 1 1 1 1 1 35.869 35.623 2 0.00026372 38169 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.265 29.158 160410000 0 43323000 0 5950100 4647900 7798300 6712200 1025800 0 11905000 13547000 14510000 15384000 15331000 20276000 58172 3913 52275 490858;490859;490860;490861;490862;490863;490864;490865;490866;490867;490868;490869;490870;490871 389322;389323;389324;389325;389326;389327;389328;389329;389330;389331;389332;389333 389326 11 VSAVSAEPPTTLPGTHPGLSETTNPMGHM 2 Oxidation (M) 2947.3692 0.36917191 4004 Q99081 TCF12 Transcription factor 12 yes yes 0 2 0 By MS/MS By MS/MS 2 0 2 1 1 72.93 68.711 3 1.375E-06 86680 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 41.188 31.73 25463000 0 22042000 3421500 0 0 0 0 0 0 0 0 0 0 0 0 58173 4004 52276 490872;490873 389334 389334 5484;5485 1 VSAVSAEPPTTLPGTHPGLSETTNPMGHM Oxidation (M) 2931.3743 0.37425729 4004 Q99081 TCF12 Transcription factor 12 yes yes 0 1 0 By MS/MS By MS/MS 2 0 3 2 1 77.347 73.222 3 9.8704E-12 91677 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.97 63.09 70217000 0 66876000 3340300 0 0 0 0 0 0 0 0 0 0 0 0 58174 4004 52276 490874;490875;490876 389335;389336 389336 5484;5485 2 VSAVSAEPPTTLPGTHPGLSETTNPMGHM Unmodified 2915.3793 0.37934266 4004 Q99081 TCF12 Transcription factor 12 yes yes 0 0 0 By MS/MS 2 0 1 1 82.917 78.213 3 4.4833E-22 97203 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.341 71.754 70622000 0 70622000 0 0 0 0 0 0 0 0 0 0 0 0 0 58175 4004 52276 490877 389337 389337 1 VSAVSVLAAQK Unmodified 1071.6288 0.62880913 3492 Q8TCU4 ALMS1 Alstrom syndrome protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 62.416 54.161 2 0.005396 73226 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.173 30.4 8624000 8624000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58176 3492 52277 490878 389338 389338 1 VSCSPTSGAVPPYSSSPNPYQTAVYPVR Unmodified 2967.4073 0.40727197 8 A1KXE4 FAM168B Myelin-associated neurite-outgrowth inhibitor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 77.439 77.5 3 4.6069E-11 89572 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 48.337 41.761 45388000 0 0 0 0 8623800 0 5474400 8465000 6051200 16774000 0 0 0 0 0 58177 8 52278 490879;490880;490881;490882;490883;490884 389339;389340;389341;389342;389343;389344;389345;389346 389339 8 VSCVLSSNLR Unmodified 1133.5863 0.58629239 4946 Q9UJX5 ANAPC4 Anaphase-promoting complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 2 1 1 1 1 1 1 46.875 47.083 2 0.0025698 52833 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 82.287 56.728 45664000 0 0 0 0 4236800 0 3785700 0 0 4785600 6825700 0 9147100 7650600 9232100 58178 4946 52279 490885;490886;490887;490888;490889;490890;490891;490892;490893 389347;389348;389349;389350;389351;389352;389353;389354 389351 7 VSDATGQMNLTK Oxidation (M) 1279.6078 0.60781569 1407 P40121 CAPG Macrophage-capping protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.65 3.66 1 3 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 17.904 17.126 2 3.2909E-92 21018 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 227.27 168.45 360260000 37425000 129070000 3343300 16433000 6165300 25906000 13369000 5857800 6876400 17237000 18455000 24684000 16583000 13302000 25556000 58179 1407 52280 490894;490895;490896;490897;490898;490899;490900;490901;490902;490903;490904;490905;490906;490907;490908;490909;490910 389355;389356;389357;389358;389359;389360;389361;389362;389363;389364;389365;389366;389367;389368;389369;389370;389371 389359 2201 17 VSDATGQMNLTK Unmodified 1263.6129 0.61290107 1407 P40121 CAPG Macrophage-capping protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34.231 33.391 2 1.9807E-13 44093 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 182.28 140.41 901990000 49023000 354710000 2839800 18246000 12738000 62484000 23632000 21790000 11833000 52384000 64270000 60691000 30363000 40207000 96774000 58180 1407 52280 490911;490912;490913;490914;490915;490916;490917;490918;490919;490920;490921;490922;490923;490924;490925 389372;389373;389374;389375;389376;389377;389378;389379;389380;389381 389376 4 VSDELVQQYQIK Unmodified 1448.7511 0.75110911 4909 Q9UHV7 MED13 Mediator of RNA polymerase II transcription subunit 13 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS 8 3.46 1 3 1 1 1 1 64.501 63.28 2 0.004139 71738 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 81.163 70.012 34987000 0 20425000 0 0 0 0 0 0 0 0 5386800 3627500 0 5547400 0 58181 4909 52281 490926;490927;490928;490929 389382;389383 389383 2 VSDEPPQLPEPQPRPGR Unmodified 1897.9646 0.96462413 580 O94761 RECQL4 ATP-dependent DNA helicase Q4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 52.663 52.693 3 0.00024293 59609 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 46.156 39.428 58850000 0 0 0 6927100 7225900 7938400 5857000 0 4153100 9288200 0 0 8154500 0 9305800 58182 580 52282 490930;490931;490932;490933;490934;490935;490936;490937;490938 389384;389385;389386;389387 389386 4 VSDEVGFGLEHVSR Unmodified 1529.7474 0.74742071 2988 Q6VY07 PACS1 Phosphofurin acidic cluster sorting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.817 60.921 3 0.015541 68634 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 31.089 24.711 119900000 0 0 0 4645100 4246700 12110000 6757100 7955200 7503500 11597000 11873000 13785000 10524000 8028700 20870000 58183 2988 52283 490939;490940;490941;490942;490943;490944;490945;490946;490947;490948;490949;490950 389388;389389;389390 389389 3 VSDFGLTK Unmodified 865.45453 0.45453316 1438 P41240 CSK Tyrosine-protein kinase CSK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 44.605 43.19 2 0.023581 58147 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.241 26.119 341420000 14569000 247540000 8638900 5098300 0 9301300 0 6405900 5263500 9515700 0 11310000 0 8854500 14926000 58184 1438 52284 490951;490952;490953;490954;490955;490956;490957;490958;490959;490960;490961 389391;389392;389393 389392 3 VSDGENVIISHFNSK Unmodified 1644.8107 0.81074925 3736 Q96AD5 PNPLA2 Patatin-like phospholipase domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 62.331 62.499 3 0.019295 70762 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 39.143 34.065 104920000 0 0 0 0 6151600 9905900 7449800 9019100 6816600 7712600 9565700 15746000 10050000 8813900 13688000 58185 3736 52285 490962;490963;490964;490965;490966;490967;490968;490969;490970;490971;490972 389394;389395;389396;389397 389395 2 VSDGGSSSTDFK Unmodified 1185.515 0.51496116 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16.227 15.801 2 2.2841E-05 15483 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 120.09 98.24 417070000 26429000 47604000 0 12704000 9044500 32346000 16126000 13735000 10929000 32435000 39534000 36617000 30120000 42499000 66946000 58186 3119 52286 490973;490974;490975;490976;490977;490978;490979;490980;490981;490982;490983;490984;490985;490986 389398;389399;389400;389401;389402;389403;389404;389405;389406;389407;389408;389409;389410;389411 389409 14 VSDGIYQHVDVREEGK Unmodified 1829.8908 0.89079049 3038 Q7KZ85 SUPT6H Transcription elongation factor SPT6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS 6.8 3.92 2 3 1 1 1 1 1 42.668 40.738 3;4 0.0041069 44778 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 40.857 30.692 57676000 7689200 0 27463000 0 0 0 0 0 0 0 0 8095800 5504600 0 8922800 58187 3038 52287 490987;490988;490989;490990;490991 389412;389413;389414;389415 389415 4 VSDILHSIFSSYK Unmodified 1494.7718 0.77184455 149 O00410 IPO5 Importin-5 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 89.84 87.476 3 0.00062946 110048 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.96 59.328 28342000 0 17937000 0 0 0 0 0 0 0 0 0 0 0 0 10405000 58188 149 52288 490992;490993 389416;389417 389416 2 VSDIQWFR Unmodified 1049.5294 0.52942943 2500 Q15126 PMVK Phosphomevalonate kinase yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 2 1 1 1 1 1 1 1 1 1 72.701 72.768 2 0.0053152 83813 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 107.32 83.345 71051000 0 0 0 3060800 3558500 2367600 4240800 4841200 4215300 7641000 7136700 9077700 5488400 5028400 14395000 58189 2500 52289 490994;490995;490996;490997;490998;490999;491000;491001;491002;491003;491004;491005;491006 389418;389419;389420;389421;389422;389423;389424;389425;389426;389427;389428;389429 389423 12 VSDLASRGQEPSK Unmodified 1372.6947 0.69465686 2195 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF yes yes 0 0 1 By MS/MS 3 0 1 1 18.57 14.854 3 0.020681 18504 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 53.034 41.501 3146700 0 3146700 0 0 0 0 0 0 0 0 0 0 0 0 0 58190 2195 52290 491007 389430 389430 1 VSDLGQFIR Unmodified 1033.5556 0.55564418 342 O43572 AKAP10 A-kinase anchor protein 10, mitochondrial yes yes 0 0 0 By MS/MS 10 0 1 1 67.993 68.185 2 0.019418 77391 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 84.916 45.373 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58191 342 52291 491008 389431 389431 1 VSDLIQLVK Unmodified 1013.6121 0.61209643 3992 Q96SN8 CDK5RAP2 CDK5 regulatory subunit-associated protein 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 80.689 77.05 2 0.014972 95972 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.51 59.915 39636000 0 35947000 3689100 0 0 0 0 0 0 0 0 0 0 0 0 58192 3992 52292 491009;491010 389432;389433 389432 1 VSDPACGSIIAK Unmodified 1216.6122 0.61217279 3674 Q92874 DNASE1L2 Deoxyribonuclease-1-like 2 yes yes 0 0 0 By MS/MS 10 0 1 1 43.729 43.187 2 0.013324 48845 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 44.097 20.142 20658000 0 0 0 20658000 0 0 0 0 0 0 0 0 0 0 0 58193 3674 52293 491011 389434 389434 1 VSDSGSHSGSDSHSGASREPGDLAER Unmodified 2583.1182 0.11817725 3931 Q96N21 ENTHD2 AP-4 complex accessory subunit tepsin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.964 17.143 4 2.9748E-08 16430 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.984 42.757 41738000 0 0 0 1967200 1873000 4407900 2331800 3794200 1739300 2250800 2889600 5809300 6198300 3167900 5308600 58194 3931 52294 491012;491013;491014;491015;491016;491017;491018;491019;491020;491021;491022;491023 389435;389436;389437;389438;389439 389439 4 VSDSLTDLALK Unmodified 1160.6289 0.62886871 3320 Q8N3C0 ASCC3 Activating signal cointegrator 1 complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 8.12 3.26 1 1 6 2 1 1 1 1 1 1 72.132 71.205 2 0.0039369 80950 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 78.098 55.317 125310000 0 93242000 0 0 0 3131900 3527700 0 0 0 0 10047000 6426400 3995700 4936500 58195 3320 52295 491024;491025;491026;491027;491028;491029;491030;491031 389440;389441;389442 389441 3 VSDSPSHIATK Unmodified 1140.5775 0.57750184 4815 Q9P2D3 HEATR5B HEAT repeat-containing protein 5B yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 15.893 12.41 3 0.030776 16350 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 36.447 19.533 53221000 0 53221000 0 0 0 0 0 0 0 0 0 0 0 0 0 58196 4815 52296 491032;491033 389443 389443 1 VSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR Unmodified 4592.0999 0.099939503 1963;842;4160;4182 P07437;P68371;Q9BVA1;Q9BUF5 TUBB;TUBB4B;TUBB2B;TUBB6 Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2B chain;Tubulin beta-6 chain no no 0 0 0 By MS/MS 2.33 0.471 2 1 3 97.317 90.726 4 5.3776E-85 116037 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 108.58 107.4 240800000 240800000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58197 842;1963;4182;4160 52297 491034;491035;491036 389444;389445;389446 389446 3 VSDYEMK Oxidation (M) 886.37423 0.37423392 959 P12004 PCNA Proliferating cell nuclear antigen yes yes 0 1 0 By MS/MS 1 0 1 1 107.17 108.06 2 0.026523 100201 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 92.822 74.017 117340000 0 117340000 0 0 0 0 0 0 0 0 0 0 0 0 0 58198 959 52298 491037 389447 389447 1 VSEALLDGSFGNCSSQYEEYR Unmodified 2410.0383 0.038318939 2895 Q6N069 NAA16 N-alpha-acetyltransferase 16, NatA auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 2 2 1 1 2 2 2 2 77.778 77.852 2;3 2.1824E-109 90005 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 224.16 217.12 260950000 0 0 0 0 10218000 14134000 4643700 9208100 18878000 57991000 55210000 90667000 0 0 0 58199 2895 52299 491038;491039;491040;491041;491042;491043;491044;491045;491046;491047;491048;491049;491050;491051 389448;389449;389450;389451;389452;389453;389454;389455;389456;389457;389458;389459 389456 9 VSECGWAAR Unmodified 1034.4604 0.46036359 234 O14976 GAK Cyclin-G-associated kinase yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 30.633 30.868 2 0.010514 32421 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 64.207 46.072 9931000 0 0 0 0 0 0 0 0 0 4371800 0 0 0 5559200 0 58200 234 52300 491052;491053 389460 389460 1 VSEDLNQAFK Unmodified 1149.5666 0.5666028 3704 Q93034 CUL5 Cullin-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.64 2.9 1 1 9 2 1 1 1 1 1 1 1 1 1 47.905 47.202 2 9.3442E-13 59680 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 182.39 158.23 138400000 0 92425000 0 0 0 4601200 3049400 3551000 0 5336900 7285200 5632500 4546100 3815600 8161100 58201 3704 52301 491054;491055;491056;491057;491058;491059;491060;491061;491062;491063;491064 389461;389462;389463;389464;389465;389466;389467;389468;389469;389470 389466 10 VSEEAESQQQWDTSK Unmodified 1750.7646 0.76458692 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 2 1 31.62 31.978 2 6.5491E-31 34889 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 184.03 160.28 74871000 0 0 0 0 0 6718100 0 6440000 0 11399000 13430000 12500000 4584500 6087800 13711000 58202 2047 52302 491065;491066;491067;491068;491069;491070;491071;491072;491073;491074;491075 389471;389472;389473;389474;389475;389476;389477;389478;389479;389480;389481 389472 11 VSEEGPAAR Unmodified 914.44576 0.44575938 2381 Q14160 SCRIB Protein scribble homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 9.3918 9.5258 2 0.0044493 8110 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 86.794 55.504 87790000 0 0 0 6006900 3954900 5223600 8011600 5706700 4694500 6784600 14477000 9064000 8379200 6422100 9064500 58203 2381 52303 491076;491077;491078;491079;491080;491081;491082;491083;491084;491085;491086;491087 389482;389483;389484;389485;389486;389487;389488;389489;389490;389491;389492 389490 10 VSEEIEDIIK Unmodified 1173.6129 0.61288429 476 O75223 GGCT Gamma-glutamylcyclotransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71.709 71.208 2 0.00033103 89296 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 133.57 90.705 2013900000 0 1443900000 27259000 149460000 21221000 22715000 17774000 56461000 17268000 35092000 44556000 61121000 25862000 27213000 63980000 58204 476 52304 491088;491089;491090;491091;491092;491093;491094;491095;491096;491097;491098;491099;491100;491101 389493;389494;389495;389496;389497;389498;389499;389500;389501;389502;389503;389504;389505;389506 389497 11 VSEEIEDIIKK Unmodified 1301.7078 0.70784731 476 O75223 GGCT Gamma-glutamylcyclotransferase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.83 3.76 3 2 7 1 3 1 1 1 1 1 1 1 1 63.737 61.563 2;3 0.0024235 80300 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.172 33.881 217370000 28038000 134600000 9920000 15205000 0 0 2007500 5193200 0 0 5742200 5945900 0 4055000 6662700 58205 476 52305 491102;491103;491104;491105;491106;491107;491108;491109;491110;491111;491112;491113 389507;389508;389509;389510;389511;389512;389513;389514 389507 5 VSEEIQK Unmodified 831.4338 0.43379771 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 11.692 11.769 2 0.018785 10389 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 111.28 56.753 149350000 0 0 0 10727000 10956000 12156000 11602000 14327000 13394000 19863000 0 35558000 20768000 0 0 58206 3023 52306 491114;491115;491116;491117;491118;491119;491120;491121;491122 389515;389516;389517 389517 3 VSEEQTQPPSPAGAGMSTAMGR Unmodified 2187.9889 0.98886633 2627 Q16666 IFI16 Gamma-interferon-inducible protein 16 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By matching 10 0 6 1 1 1 1 1 1 54.86 55.239 3 0.00026261 62505 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 25.213 21.677 44815000 0 0 0 0 0 0 0 0 0 6142600 8383700 8725800 5424000 5339100 10799000 58207 2627 52307 491123;491124;491125;491126;491127;491128 389518;389519 389519 2 VSEESETQPLVALVGNK Unmodified 1798.9313 0.93125832 1650 P51157 RAB28 Ras-related protein Rab-28 yes yes 0 0 0 By MS/MS 2.5 0.5 2 2 4 82.525 78.515 2;3 0.0053047 93989 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 71.555 71.555 48661000 0 48661000 0 0 0 0 0 0 0 0 0 0 0 0 0 58208 1650 52308 491129;491130;491131;491132 389520;389521;389522 389521 3 VSEFFMNAK Unmodified 1071.5059 0.5059168 4732 Q9NXR8 ING3 Inhibitor of growth protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 60.7 60.746 2 0.048015 69508 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 42.599 30.392 30920000 0 0 0 1965300 2124200 2319600 3476700 0 0 3940100 4936200 0 3530200 2725300 5902800 58209 4732 52309 491133;491134;491135;491136;491137;491138;491139;491140;491141 389523 389523 1 VSEFNVSSEGSGEK Unmodified 1454.6525 0.65251728 4189 Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 36.351 36.132 2 2.7359E-05 38890 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 107.17 81.544 74388000 0 10921000 0 3337500 4093000 3706500 4249100 4895700 3455800 6199300 5596200 7803400 6433700 5973800 7722800 58210 4189 52310 491142;491143;491144;491145;491146;491147;491148;491149;491150;491151;491152;491153;491154 389524;389525;389526;389527;389528;389529;389530;389531;389532;389533;389534;389535;389536 389532 13 VSEFPVIVESLK Unmodified 1345.7493 0.74931819 4673 Q9NVN3 RIC8B Synembryn-B yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 90.586 86.908 2 0.0077096 108173 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.153 34.154 25156000 0 23739000 1417000 0 0 0 0 0 0 0 0 0 0 0 0 58211 4673 52311 491155;491156 389537 389537 1 VSEGGPAEIAGLQIGDK Unmodified 1639.8417 0.84171503 225 O14907 TAX1BP3 Tax1-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 74.778 74.799 2 0.00018186 86193 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 84.566 63.009 107020000 0 0 0 5158300 5552000 10513000 0 0 0 11057000 14722000 16606000 0 12541000 30875000 58212 225 52312 491157;491158;491159;491160;491161;491162;491163;491164 389538;389539;389540;389541;389542;389543 389542 6 VSEGVEQFEDIWQK Unmodified 1692.7995 0.79951586 470 O75175 CNOT3 CCR4-NOT transcription complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 83.303 83.439 2 0.011353 96590 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 55.721 43.99 14070000 0 0 0 0 0 3249600 0 2666000 0 0 0 0 0 0 8154300 58213 470 52313 491165;491166;491167 389544;389545 389545 1 VSEHSGGRDLDSLHR Unmodified 1663.8026 0.80264418 3402 Q8NBS9 TXNDC5 Thioredoxin domain-containing protein 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 2 1 1 2 19.577 19.86 3;4 2.2753E-14 18763 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.207 60.769 173900000 0 0 0 0 4261100 11469000 4878900 1308100 6833500 7549100 12447000 39048000 5522000 7787800 72799000 58214 3402 52314 491168;491169;491170;491171;491172;491173;491174;491175;491176;491177;491178;491179;491180 389546;389547;389548;389549 389548 4 VSEHVGSR Unmodified 869.43553 0.43552905 3687;3475 Q8TAQ2;Q92922 SMARCC2;SMARCC1 SWI/SNF complex subunit SMARCC2;SWI/SNF complex subunit SMARCC1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 5.837 5.9102 2 0.037548 3662 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 51.346 29.215 26306000 0 0 0 3076000 2680600 4969700 4009800 3572900 3354400 0 1686200 1245800 1710400 0 0 58215 3475;3687 52315 491181;491182;491183;491184;491185;491186;491187;491188;491189 389550;389551 389550 2 VSELHLEVK Unmodified 1052.5866 0.58660996 5030 Q9UNF0 PACSIN2 Protein kinase C and casein kinase substrate in neurons protein 2 yes yes 0 0 0 By MS/MS 10 0 1 1 44.5 44.953 2 0.051487 50255 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 57.96 26.025 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58216 5030 52316 491190 389552 389552 1 VSEMDSER Unmodified 951.39676 0.39676028 3180 Q86W92 PPFIBP1 Liprin-beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 9.3743 9.5083 2 0.0068017 8011 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 96.253 85.839 83855000 0 0 0 6826800 4201000 5151100 6523800 5953100 3525600 5363500 14725000 8312600 7127400 5252900 10891000 58217 3180 52317 491191;491192;491193;491194;491195;491196;491197;491198;491199;491200;491201;491202 389553;389554;389555;389556;389557;389558;389559;389560;389561;389562 389561 10 VSEMDSER Oxidation (M) 967.39167 0.3916749 3180 Q86W92 PPFIBP1 Liprin-beta-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 2 2 1 5.5646 5.7565 2 0.012849 3520 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 63.565 55.894 8891900 0 0 0 0 0 0 2382900 0 0 3281700 3091300 0 136110 0 0 58218 3180 52317 491203;491204;491205;491206;491207;491208 389563;389564;389565;389566;389567 389567 4807 5 VSEMDSERLQYEK Unmodified 1612.7403 0.74028643 3180 Q86W92 PPFIBP1 Liprin-beta-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.08 2.5 2 1 22 2 1 1 2 1 2 2 2 2 2 2 2 2 2 38.512 38.162 2;3 1.8088E-06 41263 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.618 66.66 482590000 0 57891000 2195200 18377000 19946000 4263000 31387000 48498000 23190000 42288000 60702000 43624000 43420000 32398000 54406000 58219 3180 52318 491209;491210;491211;491212;491213;491214;491215;491216;491217;491218;491219;491220;491221;491222;491223;491224;491225;491226;491227;491228;491229;491230;491231;491232;491233 389568;389569;389570;389571;389572;389573;389574;389575;389576;389577;389578;389579;389580;389581;389582;389583 389574 16 VSEMDSERLQYEK Oxidation (M) 1628.7352 0.73520105 3180 Q86W92 PPFIBP1 Liprin-beta-1 yes yes 0 1 1 By MS/MS 3 0 1 1 32.138 27.697 3 0.019543 34599 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 42.095 23.267 5920200 0 5920200 0 0 0 0 0 0 0 0 0 0 0 0 0 58220 3180 52318 491234 389584 389584 4807 1 VSEMSSFQR Unmodified 1069.4862 0.48624399 670 O95573 ACSL3 Long-chain-fatty-acid--CoA ligase 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.382 33.567 2 0.018576 36476 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 54.712 40.072 165270000 0 0 0 7525700 13565000 11820000 9314700 12779000 10056000 13195000 18080000 20963000 16216000 14174000 17579000 58221 670 52319 491235;491236;491237;491238;491239;491240;491241;491242;491243;491244;491245;491246 389585;389586;389587;389588 389586 1 VSEMSSFQR Oxidation (M) 1085.4812 0.48115861 670 O95573 ACSL3 Long-chain-fatty-acid--CoA ligase 3 yes yes 0 1 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.653 18.85 2 0.021597 19031 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 47.198 22.275 54978000 0 0 0 3200100 6178500 3602600 4930900 4485200 3639600 5348100 4230700 6780400 4077700 4841000 3662900 58222 670 52319 491247;491248;491249;491250;491251;491252;491253;491254;491255;491256;491257;491258 389589;389590;389591;389592 389591 3 VSENDFEDLLSNQGFSSR Unmodified 2042.9181 0.91812745 234 O14976 GAK Cyclin-G-associated kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 2 2 2 2 2 2 1 2 2 85.721 85.83 2;3 5.234E-11 99282 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.98 86.426 103650000 0 0 0 0 6161000 6795100 5063700 8988500 7890000 12930000 10735000 11136000 2714800 7351700 23879000 58223 234 52320 491259;491260;491261;491262;491263;491264;491265;491266;491267;491268;491269;491270;491271;491272;491273;491274;491275;491276;491277;491278;491279 389593;389594;389595;389596;389597;389598;389599;389600;389601 389594 8 VSENDFEDLLSNQGFSSRSDK Unmodified 2373.0721 0.072061909 234 O14976 GAK Cyclin-G-associated kinase yes yes 0 0 1 By MS/MS 2 0 1 1 83.821 81.378 3 0.038574 98602 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 23.658 15.268 2918000 0 0 2918000 0 0 0 0 0 0 0 0 0 0 0 0 58224 234 52321 491280 389602 389602 1 VSEPVLSLPVR Unmodified 1194.6972 0.69722304 2939 Q6P6C2 ALKBH5 RNA demethylase ALKBH5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 77.966 78.076 2 0.016526 90056 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 43.282 31.646 27387000 0 0 0 0 3304900 0 3653300 2477500 0 3255200 2890800 3451700 2662700 2233200 3457600 58225 2939 52322 491281;491282;491283;491284;491285;491286;491287;491288;491289 389603;389604 389603 2 VSEPVLSLPVRR Unmodified 1350.7983 0.79833407 2939 Q6P6C2 ALKBH5 RNA demethylase ALKBH5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.983 68.063 3 0.006001 78072 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 41.401 35.368 86331000 0 0 0 4872800 3825400 6923700 7440800 8539900 4629700 7349100 8971100 11564000 5737000 6799000 9678800 58226 2939 52323 491290;491291;491292;491293;491294;491295;491296;491297;491298;491299;491300;491301 389605;389606;389607;389608;389609;389610;389611;389612 389609 8 VSEQGLIEILK Unmodified 1227.7075 0.70745338 207 O14737 PDCD5 Programmed cell death protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching 7.4 3.68 4 1 10 1 3 1 1 1 1 1 1 1 1 1 1 1 84.668 83.177 2 3.655E-05 104752 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.71 88.07 2269100000 75878000 1794000000 47913000 0 4834600 0 7727900 6005200 8663100 13215000 55596000 51672000 8164400 48242000 147170000 58227 207 52324 491302;491303;491304;491305;491306;491307;491308;491309;491310;491311;491312;491313;491314;491315;491316 389613;389614;389615;389616;389617;389618 389613 6 VSEQGLIEILKK Unmodified 1355.8024 0.8024164 207 O14737 PDCD5 Programmed cell death protein 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 83.321 78.203 3 0.0013059 98757 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.324 38.17 68469000 48731000 17843000 1894200 0 0 0 0 0 0 0 0 0 0 0 0 58228 207 52325 491317;491318;491319 389619;389620 389619 2 VSEQLQAK Unmodified 901.4869 0.48689592 1003 P14635 CCNB1 G2/mitotic-specific cyclin-B1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 14.766 14.003 2 0.010604 13534 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 79.116 48.38 5532300000 5142100 60994000 2769400 0 617260000 532120000 0 0 1817200000 605210000 674870000 1123900000 38949000 53825000 0 58229 1003 52326 491320;491321;491322;491323;491324;491325;491326;491327;491328;491329;491330 389621;389622;389623;389624;389625;389626;389627;389628;389629 389624 9 VSESNGEFFFK Unmodified 1289.5928 0.59281755 4328 Q9H0H0 INTS2 Integrator complex subunit 2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 75.24 70.934 2 0.00045515 88929 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.4 73.076 29026000 0 29026000 0 0 0 0 0 0 0 0 0 0 0 0 0 58230 4328 52327 491331;491332 389630 389630 1 VSESPSPVTTNTPAQFASVSPTVPEFLK Unmodified 2916.4757 0.47566911 4995 Q9ULH7 MKL2 MKL/myocardin-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.55 1 1 4 2 1 1 1 1 91.585 90.316 3 2.9913E-57 111581 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.87 110.41 67251000 0 49222000 0 0 0 0 0 0 0 6517600 0 2523100 0 1842600 7146200 58231 4995 52328 491333;491334;491335;491336;491337;491338 389631;389632;389633;389634;389635 389632 5 VSETQMCESNSSK Unmodified 1485.6076 0.60755769 4968 Q9UKJ3 GPATCH8 G patch domain-containing protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.431 14.593 2 1.4469E-19 13969 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 168.3 149.06 65316000 0 0 0 2705100 3486500 3775500 4189600 4928300 3401900 6553000 6585800 6729600 8774100 6074200 8112900 58232 4968 52329 491339;491340;491341;491342;491343;491344;491345;491346;491347;491348;491349;491350 389636;389637;389638;389639;389640;389641;389642;389643;389644;389645;389646;389647 389645 12 VSETQMCESNSSK Oxidation (M) 1501.6025 0.60247231 4968 Q9UKJ3 GPATCH8 G patch domain-containing protein 8 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 6.3126 6.433 2 0.0013531 4651 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 60.434 50.062 15335000 0 0 0 800800 1280900 1163900 2342900 1537100 0 1480400 2012400 0 1712400 1839700 1164500 58233 4968 52329 491351;491352;491353;491354;491355;491356;491357;491358;491359;491360 389648;389649;389650 389648 6313 3 VSEVEAVLSQK Unmodified 1187.6398 0.63976774 189 O14578 CIT Citron Rho-interacting kinase yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By matching 10 0 6 1 1 1 1 1 1 58.847 58.809 2 0.040966 67034 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 47.706 8.4012 10020000 0 0 0 1267000 1615400 0 0 1183000 0 0 1788800 0 2405500 1760700 0 58234 189 52330 491361;491362;491363;491364;491365;491366 389651 389651 1 VSEVEEEK Unmodified 947.44476 0.44475633 312 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 28 3 3 3 2 2 3 3 1 2 2 2 2 16.715 16.826 2 0.025413 6443 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.716 16.824 192290000 0 0 0 17800000 16653000 17851000 15361000 9526600 15720000 20502000 13486000 25173000 16679000 12092000 11442000 58235 312 52331 491367;491368;491369;491370;491371;491372;491373;491374;491375;491376;491377;491378;491379;491380;491381;491382;491383;491384;491385;491386;491387;491388;491389;491390;491391;491392;491393;491394 389652;389653;389654;389655 389653 4 VSEYPAVIVEPVPSAR Unmodified 1711.9145 0.91448604 2567 Q15723 ELF2 ETS-related transcription factor Elf-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 77.658 77.721 2 0.0006597 89898 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.157 44.618 85160000 0 0 0 7298800 5725900 0 5493600 8579000 5007100 8955600 6918200 12779000 7056400 7172000 10174000 58236 2567 52332 491395;491396;491397;491398;491399;491400;491401;491402;491403;491404;491405 389656;389657;389658;389659;389660;389661;389662;389663;389664;389665;389666;389667;389668 389666 13 VSEYVPEIVNFVQK Unmodified 1649.8665 0.86647322 1579 P49589 CARS Cysteine--tRNA ligase, cytoplasmic yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 87.156 87.338 2 0.0010936 101114 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.706 71.977 16813000 0 0 0 0 0 0 0 0 0 0 3393700 0 0 0 13419000 58237 1579 52333 491406;491407 389669 389669 1 VSFADPIYQAGLADDIDRR Unmodified 2121.0491 0.049082043 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 1 By MS/MS 10 0 1 1 82.628 82.83 3 0.0029059 95576 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 29.444 25.724 11696000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11696000 58238 2804 52334 491408 389670 389670 1 VSFCAPGPPGR Unmodified 1143.5495 0.54951295 3276 Q8IY67 RAVER1 Ribonucleoprotein PTB-binding 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.472 51.621 2 0.0014188 58390 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 72.879 64.461 293420000 0 0 0 15291000 17376000 23861000 19930000 32167000 17211000 19345000 33895000 36546000 21841000 28250000 27707000 58239 3276 52335 491409;491410;491411;491412;491413;491414;491415;491416;491417;491418;491419;491420 389671;389672;389673;389674;389675;389676;389677;389678;389679;389680;389681;389682;389683 389677 13 VSFELFADK Unmodified 1054.5335 0.53351176 1931 P62937 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.11 3.8 6 1 12 2 3 2 1 1 1 1 1 1 1 1 1 1 1 1 80.755 79.821 2 0.0037823 92419 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.948 55.151 2767000000 24377000 158730000 13250000 18424000 26298000 38771000 36765000 34067000 38969000 50967000 339440000 411990000 49129000 259270000 1266500000 58240 1931 52336 491421;491422;491423;491424;491425;491426;491427;491428;491429;491430;491431;491432;491433;491434;491435;491436;491437;491438;491439 389684;389685;389686;389687;389688;389689;389690;389691;389692;389693;389694;389695;389696;389697;389698;389699;389700;389701;389702;389703;389704 389689 21 VSFENMTVGEESK Unmodified 1455.6552 0.65515981 4077 Q99996 AKAP9 A-kinase anchor protein 9 yes yes 0 0 0 By MS/MS 2 0 1 1 65.273 59.356 2 0.024017 75904 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.49 43.122 25644000 0 25644000 0 0 0 0 0 0 0 0 0 0 0 0 0 58241 4077 52337 491440 389705 389705 1 VSFENMTVGEESK Oxidation (M) 1471.6501 0.65007443 4077 Q99996 AKAP9 A-kinase anchor protein 9 yes yes 0 1 0 By MS/MS 2 0 1 1 45.01 39.689 2 0.0093595 51657 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.01 54.344 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58242 4077 52337 491441 389706 389706 5584 1 VSFLLPTLRK Unmodified 1172.7281 0.72812924 4876 Q9UFC0 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching 10 0 8 1 1 1 1 1 1 1 1 77.954 78.103 3 0.017172 90216 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 31.185 28.869 29857000 0 0 0 0 0 7299300 1477400 1996100 4422100 1899200 0 5123100 0 1896600 5742800 58243 4876 52338 491442;491443;491444;491445;491446;491447;491448;491449 389707 389707 1 VSFPETPK Unmodified 903.47018 0.47018322 4741 Q9NYD6 HOXC10 Homeobox protein Hox-C10 yes yes 0 0 0 By MS/MS 10 0 1 1 44.677 45.017 2 0.043325 50594 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 77.046 41.797 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58244 4741 52339 491450 389708 389708 1 VSFPLEK Unmodified 818.4538 0.45380487 2867 Q6BDS2 UHRF1BP1 UHRF1-binding protein 1 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 55.14 55.211 2 0.04445 61048 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.799 20.917 195280000 0 0 0 12608000 17088000 19458000 20229000 23858000 15816000 24115000 2374400 0 0 22552000 37184000 58245 2867 52340 491451;491452;491453;491454;491455;491456;491457;491458;491459;491460 389709;389710 389709 2 VSFSRDAPVGEEEAPAK Unmodified 1787.869 0.86899241 4844 Q9UBK8 MTRR Methionine synthase reductase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 49.593 43.983 3 4.593E-19 55345 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 119.4 102.18 317950000 37595000 94551000 185800000 0 0 0 0 0 0 0 0 0 0 0 0 58246 4844 52341 491461;491462;491463;491464 389711;389712;389713;389714;389715 389715 5 VSFTGSVPTGMK Oxidation (M) 1225.6013 0.60127375 1561 P49189 ALDH9A1 4-trimethylaminobutyraldehyde dehydrogenase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 6.12 3.89 3 1 4 2 1 1 1 1 1 1 50.131 47.428 2 2.11E-05 61387 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.55 87.225 491380000 64684000 375980000 5114900 0 0 0 0 5712600 0 0 14581000 0 0 9362200 15944000 58247 1561 52342 491465;491466;491467;491468;491469;491470;491471;491472 389716;389717;389718;389719;389720;389721 389716 2479 6 VSFTGSVPTGMK Unmodified 1209.6064 0.60635913 1561 P49189 ALDH9A1 4-trimethylaminobutyraldehyde dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 6.56 3.86 3 1 5 1 2 1 1 1 1 1 1 62.491 60.074 2 2.8029E-05 68121 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 115.78 82.519 1123300000 171910000 847100000 7285700 12632000 0 0 0 0 0 0 15632000 13720000 0 11286000 43760000 58248 1561 52342 491473;491474;491475;491476;491477;491478;491479;491480;491481 389722;389723;389724;389725;389726;389727;389728 389723 7 VSGAGFSPSSK Unmodified 1022.5033 0.50327426 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.26 23.463 2 7.6698E-06 25238 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 130.41 85.965 324330000 0 0 0 20450000 17826000 16914000 19049000 17831000 12572000 24380000 33831000 51200000 31502000 26407000 52367000 58249 4285 52343 491482;491483;491484;491485;491486;491487;491488;491489;491490;491491;491492;491493 389729;389730;389731;389732;389733;389734;389735;389736;389737;389738 389738 8 VSGAQEMVSSAK Oxidation (M) 1208.5707 0.5707019 421 O60664 PLIN3 Perilipin-3 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.12 3.92 2 3 1 11 2 3 1 1 1 1 1 1 1 1 1 1 1 1 23.917 23.59 2 1.7856E-23 11304 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 162.38 100.7 2016000000 119250000 239160000 6110200 101590000 111740000 124910000 145130000 152260000 115160000 216430000 129090000 263480000 176130000 115600000 0 58250 421 52344 491494;491495;491496;491497;491498;491499;491500;491501;491502;491503;491504;491505;491506;491507;491508;491509;491510 389739;389740;389741;389742;389743;389744;389745;389746;389747;389748;389749;389750;389751;389752;389753;389754;389755;389756 389743 533 15 VSGAQEMVSSAK Unmodified 1192.5758 0.57578728 421 O60664 PLIN3 Perilipin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.48 1 2 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 29.472 28.613 2 5.7253E-54 30574 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 205.53 113.68 4374100000 28772000 760540000 0 199640000 234840000 214640000 238130000 328640000 198520000 351650000 374170000 409710000 313830000 273420000 447600000 58251 421 52344 491511;491512;491513;491514;491515;491516;491517;491518;491519;491520;491521;491522;491523;491524;491525;491526 389757;389758;389759;389760;389761;389762;389763;389764;389765;389766;389767;389768;389769;389770;389771;389772;389773;389774;389775;389776;389777;389778 389771 22 VSGDAAQDLDR Unmodified 1145.5313 0.53127993 5203 Q9Y4H2 IRS2 Insulin receptor substrate 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 24.906 24.726 2 0.012066 26223 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 57.174 20.153 37272000 0 0 0 10095000 12519000 14658000 0 0 0 0 0 0 0 0 0 58252 5203 52345 491527;491528;491529;491530 389779;389780;389781;389782 389781 3 VSGDDVIIGK Unmodified 1001.5393 0.53932542 1291 P30876 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 4 2 1 1 40.537 40.851 2 0.0027192 45520 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 80.787 49.558 35096000 0 0 0 0 0 0 0 0 0 0 0 0 19250000 15847000 0 58253 1291 52346 491531;491532;491533;491534 389783;389784;389785;389786 389786 4 VSGDIFSR Unmodified 879.44503 0.4450311 44 C4AMC7;Q6VEQ5;A8K0Z3 WASH3P;WASH2P;WASH1 Putative WAS protein family homolog 3;WAS protein family homolog 2;WAS protein family homolog 1 yes no 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 42.628 42.963 2 0.011634 46997 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 76.478 29.484 38854000 0 0 0 0 0 0 4394900 0 3533000 0 7528800 0 6516900 6963100 9917100 58254 44 52347 491535;491536;491537;491538;491539;491540 389787 389787 1 VSGDMQK Unmodified 763.35344 0.3534389 4613 Q9NRX4 PHPT1 14 kDa phosphohistidine phosphatase yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 4.2185 1.5044 2 0.031008 3718 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.986 57.628 19294000 0 18345000 949780 0 0 0 0 0 0 0 0 0 0 0 0 58255 4613 52348 491541;491542 389788 389788 1 VSGEATIGHVEK Unmodified 1225.6303 0.63026569 4249 Q9BYE7 PCGF6 Polycomb group RING finger protein 6 yes yes 0 0 0 By matching By MS/MS By matching 2 0 4 1 2 1 20.052 16.364 2;3 0.0058493 22074 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 44.299 12.291 96047000 12717000 81299000 2031400 0 0 0 0 0 0 0 0 0 0 0 0 58256 4249 52349 491543;491544;491545;491546 389789;389790 389789 1 VSGEEELHTGPPAPQGPLSVPQGLPTQSLASPPAR Unmodified 3500.79 0.78996082 5051 Q9UPN7 PPP6R1 Serine/threonine-protein phosphatase 6 regulatory subunit 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 1 1 2 1 2 2 82.656 82.77 3;4 2.8264E-26 96218 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 54.514 47.044 145260000 0 0 0 0 4604800 7631400 2254800 6208400 4758800 13848000 12688000 25871000 7000800 18503000 41896000 58257 5051 52350 491547;491548;491549;491550;491551;491552;491553;491554;491555;491556;491557;491558;491559;491560 389791;389792;389793;389794;389795 389794 4 VSGETDLSK Unmodified 934.46074 0.46074075 205 O14732 IMPA2 Inositol monophosphatase 2 yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 12.988 13.328 2 0.040497 11767 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 44.377 13.765 33962000 0 0 0 0 0 0 0 0 0 2397000 5260600 7279000 0 3665200 15360000 58258 205 52351 491561;491562;491563;491564;491565 389796 389796 1 VSGGLEVLAEK Unmodified 1100.6077 0.60773933 1404 P39687;O43423 ANP32A;ANP32C Acidic leucine-rich nuclear phosphoprotein 32 family member A;Acidic leucine-rich nuclear phosphoprotein 32 family member C yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.47 2 1 14 1 1 1 1 1 2 1 1 1 1 1 1 2 59.065 59.216 2 0.00028169 67511 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 104.22 62.498 780700000 0 0 0 20630000 33934000 33249000 42095000 46797000 39653000 39811000 128400000 82196000 60669000 73684000 179580000 58259 1404 52352 491566;491567;491568;491569;491570;491571;491572;491573;491574;491575;491576;491577;491578;491579;491580 389797;389798;389799;389800;389801;389802;389803;389804;389805;389806;389807;389808;389809;389810;389811;389812;389813;389814 389806 18 VSGGLPLMHVR Unmodified 1164.6437 0.64374769 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 60.688 60.787 3 0.032281 69483 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 35.71 26.496 188460000 0 0 0 9477800 10264000 14492000 11305000 21442000 0 17962000 17017000 33669000 14878000 15858000 22093000 58260 3023 52353 491581;491582;491583;491584;491585;491586;491587;491588;491589;491590;491591 389815;389816 389816 1 VSGGPSLEQR Unmodified 1028.5251 0.52507234 5084 Q9Y262 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 23.124 23.234 2 0.0015425 23278 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 105.4 79.66 166440000 0 0 0 16923000 14588000 0 14811000 15131000 0 0 0 0 0 42845000 62140000 58261 5084 52354 491592;491593;491594;491595;491596;491597;491598;491599;491600 389817;389818;389819;389820;389821;389822;389823;389824 389819 8 VSGHVITDIVEGK Unmodified 1352.73 0.72997974 1749 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 4 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 62.208 60.786 2;3 3.769E-10 83712 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 117.86 98.881 177250000 95816000 0 19536000 2142600 1699000 5810900 3833700 3719300 4058300 6773500 6357700 7230900 4055000 4987400 11228000 58262 1749 52355 491601;491602;491603;491604;491605;491606;491607;491608;491609;491610;491611;491612;491613;491614;491615;491616 389825;389826;389827;389828;389829;389830;389831;389832;389833 389828 9 VSGLIQPAEVFAPK Unmodified 1454.8133 0.81331543 3183 Q86WG5 SBF2 Myotubularin-related protein 13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 82.429 82.478 2 2.3213E-05 95439 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 87.298 67.536 54773000 0 0 0 3519700 5941700 5444400 3147500 4778600 4397100 5456400 4374600 7262600 5331700 5118500 0 58263 3183 52356 491617;491618;491619;491620;491621;491622;491623;491624;491625;491626;491627 389834;389835;389836;389837;389838;389839;389840;389841;389842 389835 9 VSGLLVLDYSK Unmodified 1192.6703 0.67033959 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS 7.69 3.47 2 2 9 2 1 1 1 1 1 1 1 1 1 1 1 81.074 79.829 2 0.00095504 96996 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 93.096 79.093 92431000 52499000 3989300 10541000 0 0 2146300 1525400 2263300 1850300 0 2306000 3779000 1978600 2712900 6840000 58264 1300 52357 491628;491629;491630;491631;491632;491633;491634;491635;491636;491637;491638;491639;491640 389843;389844;389845;389846;389847 389846 5 VSGLPTPDLSWQLDGK Unmodified 1711.8781 0.87810054 3581 Q8WX93 PALLD Palladin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 86.12 86.228 2 5.854E-21 99713 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 116.24 99.984 61537000 0 0 0 0 1960600 5072000 1957500 2780900 5619200 7363100 5912400 4112400 2031200 5140100 19588000 58265 3581 52358 491641;491642;491643;491644;491645;491646;491647;491648;491649;491650;491651 389848;389849;389850;389851;389852;389853;389854;389855;389856;389857 389851 10 VSGLQGSDALNIQQNQTSGGSLQAGQQK Unmodified 2813.3904 0.39037636 856 P08047 SP1 Transcription factor Sp1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 2 2 2 2 1 2 2 2 2 2 2 64.127 64.251 2;3 1.5737E-135 73156 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 165.96 160.06 1226300000 0 0 0 50541000 76782000 119440000 84506000 84513000 63783000 112150000 134670000 98344000 102210000 104810000 194570000 58266 856 52359 491652;491653;491654;491655;491656;491657;491658;491659;491660;491661;491662;491663;491664;491665;491666;491667;491668;491669;491670;491671;491672;491673 389858;389859;389860;389861;389862;389863;389864;389865;389866;389867;389868;389869;389870;389871;389872;389873 389861 16 VSGNLAVIQK Unmodified 1027.6026 0.60259438 3248 Q8IWW6 ARHGAP12 Rho GTPase-activating protein 12 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 42.559 42.696 2 0.028085 47836 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 43.769 14.62 10022000 0 0 0 0 3187300 0 0 2631100 0 0 0 0 0 0 4203600 58267 3248 52360 491674;491675;491676 389874;389875 389875 2 VSGNPQVHIK Unmodified 1077.5931 0.59309232 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS 7 3.87 3 5 1 1 1 1 1 1 1 1 22.695 21.387 2 9.179E-05 31685 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 121.85 91.287 93405000 37060000 11387000 9529600 0 0 0 0 0 0 4976900 5202400 12730000 6213000 0 6305400 58268 1492 52361 491677;491678;491679;491680;491681;491682;491683;491684 389876;389877;389878;389879 389878 3 VSGPDLDLNLK Unmodified 1169.6292 0.62920306 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.64 2.9 1 1 9 2 1 1 1 1 1 1 1 1 1 73.045 72.298 2 0.018985 83076 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 43.297 21.211 412000000 0 125020000 0 18235000 17309000 30050000 30131000 34242000 28913000 0 34985000 54318000 38800000 0 0 58269 2172 52362 491685;491686;491687;491688;491689;491690;491691;491692;491693;491694;491695 389880;389881;389882;389883;389884;389885;389886;389887 389884 6 VSGQPQSVTASSDK Unmodified 1389.6736 0.67358707 3362 Q8N6T3 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.115 16.292 2 1.1344E-32 15724 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 162.38 149.26 444580000 0 0 0 18835000 21235000 25453000 32251000 26330000 23711000 31981000 56656000 48514000 45006000 42631000 71974000 58270 3362 52363 491696;491697;491698;491699;491700;491701;491702;491703;491704;491705;491706;491707 389888;389889;389890;389891;389892;389893;389894;389895;389896;389897 389896 10 VSGSELVQK Unmodified 945.51311 0.51311067 1876 P62195 PSMC5 26S protease regulatory subunit 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 22.991 23.217 2 1.7845E-05 23772 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 133.55 79.994 478680000 0 0 0 33282000 0 0 14332000 16818000 8127200 90184000 115830000 177850000 22254000 0 0 58271 1876 52364 491708;491709;491710;491711;491712;491713;491714;491715;491716;491717 389898;389899;389900;389901;389902;389903;389904;389905;389906;389907 389903 5 VSGSPEQAVEENLSSYSLDRR Unmodified 2322.1088 0.10878177 5273 Q9Y6A5 TACC3 Transforming acidic coiled-coil-containing protein 3 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 76.92 77.095 3 0.00022389 89125 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 42.639 39.674 17973000 0 0 0 0 0 0 0 2250900 2145700 4096400 4834800 4645000 0 0 0 58272 5273 52365 491718;491719;491720;491721;491722 389908;389909;389910;389911 389911 4 VSGSQIVDIDK Unmodified 1159.6085 0.60846762 1812 P60520 GABARAPL2 Gamma-aminobutyric acid receptor-associated protein-like 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 47.793 48.221 2 0.0024322 54531 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 67.726 36.652 57593000 0 0 0 0 0 13414000 0 0 0 7255500 11378000 8312600 0 0 17233000 58273 1812 52366 491723;491724;491725;491726;491727;491728 389912;389913;389914;389915;389916;389917 389912 5 VSGSQVEVNDIK Unmodified 1273.6514 0.65139506 451;3110 Q7Z6B7;O75044 SRGAP1;SRGAP2 SLIT-ROBO Rho GTPase-activating protein 1;SLIT-ROBO Rho GTPase-activating protein 2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.317 37.497 2 9.3795E-09 40438 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 164.65 131.27 115450000 0 0 0 6924000 8965100 11048000 10990000 7173100 6750800 11120000 11598000 13550000 8146400 6717800 12468000 58274 3110;451 52367 491729;491730;491731;491732;491733;491734;491735;491736;491737;491738;491739;491740 389918;389919;389920;389921;389922;389923;389924;389925;389926;389927;389928;389929 389921 12 VSGTLDTPEK Unmodified 1045.5292 0.52915466 4250 Q9BYG3 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 23.255 22.79 2 0.0040755 23454 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 74.165 27.171 59852000 0 9891200 0 6949200 0 9006100 0 4543300 5111900 10320000 0 14030000 0 0 0 58275 4250 52368 491741;491742;491743;491744;491745;491746;491747;491748;491749;491750;491751 389930;389931;389932;389933;389934;389935;389936;389937;389938;389939 389938 8 VSGVDGYETEGIR Unmodified 1380.6521 0.65212334 2415 Q14566 MCM6 DNA replication licensing factor MCM6 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 47.357 47.67 2 2.6895E-08 53386 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 134.57 105.84 155470000 0 0 0 0 0 20043000 0 14458000 0 12510000 45560000 0 0 0 62898000 58276 2415 52369 491752;491753;491754;491755;491756 389940;389941;389942;389943 389942 4 VSGVDGYETEGIRGLR Unmodified 1706.8588 0.85876208 2415 Q14566 MCM6 DNA replication licensing factor MCM6 yes yes 0 0 1 By matching By matching By MS/MS 10 0 3 1 1 1 59.403 59.665 3 0.044927 67228 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 24.918 14.579 24112000 0 0 0 0 0 3220800 0 0 5147700 0 0 0 0 0 15743000 58277 2415 52370 491757;491758;491759 389944 389944 1 VSGVGNNISFEEK Unmodified 1378.6729 0.67285879 36 A8K2U0 A2ML1 Alpha-2-macroglobulin-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching 10 0 5 1 1 1 1 1 50.997 51.111 2 6.1168E-20 58718 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 165.63 137.81 114510000 0 0 0 54748000 0 0 0 14994000 6549500 18500000 0 19721000 0 0 0 58278 36 52371 491760;491761;491762;491763;491764 389945;389946;389947;389948 389948 4 VSGVVGDPQMVLSAPHPGLSEAHNPAGHM 2 Oxidation (M) 2922.3753 0.37526034 1028 P15923 TCF3 Transcription factor E2-alpha yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 71.765 71.33 4 1.0616E-15 81742 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 55.358 52.884 48581000 0 0 5762300 0 5880500 0 0 6152800 0 13423000 11335000 0 6027900 0 0 58279 1028 52372 491765;491766;491767;491768;491769;491770 389949;389950;389951;389952 389951 1423;1424 4 VSGVVGDPQMVLSAPHPGLSEAHNPAGHM Oxidation (M) 2906.3803 0.38034572 1028 P15923 TCF3 Transcription factor E2-alpha yes yes 0 1 0 By MS/MS 2 0 1 1 81.379 73.248 4 1.9164E-08 96004 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.914 49.803 31023000 31023000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58280 1028 52372 491771 389953 389953 1423;1424 1 VSGVVGDPQMVLSAPHPGLSEAHNPAGHM Unmodified 2890.3854 0.38543109 1028 P15923 TCF3 Transcription factor E2-alpha yes yes 0 0 0 By MS/MS 2 0 1 1 83.644 75.514 4 1.4274E-11 98775 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.805 71.332 25382000 25382000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58281 1028 52372 491772 389954;389955 389955 2 VSHDNLTVERDESSSK Unmodified 1801.8442 0.84423422 273 O15344 MID1 E3 ubiquitin-protein ligase Midline-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17.745 17.349 3 0.0013176 23018 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 70.784 52.053 75060000 5038100 0 34240000 1635600 1651400 3195000 1922400 1954700 1689600 3038800 3217100 4874000 3282900 3092400 6227700 58282 273 52373 491773;491774;491775;491776;491777;491778;491779;491780;491781;491782;491783;491784;491785;491786 389956;389957;389958 389958 2 VSHDPFAQQRPYENFQNTEGK Unmodified 2491.1516 0.15164963 2313 Q13546 RIPK1 Receptor-interacting serine/threonine-protein kinase 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 2 53.412 53.829 3;4 0.00014505 60059 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.968 41.165 124900000 0 0 0 0 0 21989000 0 0 0 0 8041500 25018000 18966000 14143000 36743000 58283 2313 52374 491787;491788;491789;491790;491791;491792;491793 389959;389960;389961 389961 2 VSHIDVITAEMAK Unmodified 1412.7334 0.73335055 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 4 10 1 1 2 1 1 1 1 1 1 1 1 1 1 63.077 61.655 2;3 7.5709E-20 77422 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 170.62 157.24 575930000 269200000 60750000 127200000 0 5659800 9127600 6068400 13939000 6490600 12262000 16741000 13492000 0 10991000 24009000 58284 5071 52375 491794;491795;491796;491797;491798;491799;491800;491801;491802;491803;491804;491805;491806;491807 389962;389963;389964;389965;389966;389967;389968;389969;389970;389971;389972;389973 389971 10 VSHIDVITAEMAK Oxidation (M) 1428.7283 0.72826518 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.8 3.92 4 6 1 1 2 1 1 1 1 1 1 47.44 45.427 3 0.0014567 49900 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 49.483 35.225 309260000 99141000 24208000 112070000 0 7268200 9742300 0 0 0 10678000 0 18011000 12892000 0 15249000 58285 5071 52375 491808;491809;491810;491811;491812;491813;491814;491815;491816;491817 389974;389975;389976;389977;389978;389979 389979 6449 3 VSHKPSGLVMAR Unmodified 1280.7023 0.7023252 2079 Q02750 MAP2K1 Dual specificity mitogen-activated protein kinase kinase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 24.273 24.481 3 0.035678 25416 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 26.124 14.393 92376000 0 0 0 5110100 3216000 6180900 7365800 7222300 0 8069500 6378600 13073000 4759900 8939300 22061000 58286 2079 52376 491818;491819;491820;491821;491822;491823;491824;491825;491826;491827;491828 389980 389980 1 VSHLLGINVTDFTR Unmodified 1570.8467 0.84674083 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 1 2 1 1 3 1 1 1 1 1 2 81.181 81.262 2;3 6.1082E-05 93908 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 83.499 75.323 304390000 0 0 0 4160000 4524800 28205000 6973200 12948000 26360000 25433000 19041000 28425000 9384500 15902000 123030000 58287 1356 52377 491829;491830;491831;491832;491833;491834;491835;491836;491837;491838;491839;491840;491841;491842;491843;491844 389981;389982;389983;389984;389985;389986;389987;389988;389989;389990;389991;389992;389993;389994;389995;389996 389983 13 VSHPALLSDGK Unmodified 1122.6033 0.60332266 1187 P25391 LAMA1 Laminin subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 37.116 32.163 2 0.0083766 40247 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 68.893 31.335 22286000 14727000 0 7558600 0 0 0 0 0 0 0 0 0 0 0 0 58288 1187 52378 491845;491846 389997 389997 1 VSHQGYSTEAEFEEPR Unmodified 1864.8228 0.8227705 1284 P30533 LRPAP1 Alpha-2-macroglobulin receptor-associated protein yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 41.409 41.902 3 0.0080654 45943 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 35.492 32.779 22440000 0 0 0 0 0 0 0 0 0 0 3845800 0 0 5648400 12946000 58289 1284 52379 491847;491848;491849 389998;389999 389999 2 VSHSPALSSDVR Unmodified 1253.6364 0.6364137 2852 Q68CP9 ARID2 AT-rich interactive domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.568 23.773 3 0.00029534 23888 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 56.328 37.703 188470000 0 0 0 13719000 12659000 11285000 14616000 13860000 11378000 16919000 9484100 20762000 21100000 16409000 26282000 58290 2852 52380 491850;491851;491852;491853;491854;491855;491856;491857;491858;491859;491860;491861 390000;390001;390002;390003;390004;390005;390006;390007;390008;390009;390010;390011;390012 390008 8 VSHSPALSSDVRSTNGTAECK Unmodified 2202.0335 0.033508333 2852 Q68CP9 ARID2 AT-rich interactive domain-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 4 2 2 31.123 26.529 3;4 2.3469E-05 37285 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.658 38.933 79483000 68246000 0 11237000 0 0 0 0 0 0 0 0 0 0 0 0 58291 2852 52381 491862;491863;491864;491865 390013;390014;390015;390016 390014 4 VSHVADTK Unmodified 855.44503 0.4450311 5031 Q9UNF1 MAGED2 Melanoma-associated antigen D2 yes yes 0 0 0 By MS/MS 2 0 1 1 2.5345 -0.77066 2 0.01442 2713 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.815 51.204 41258000 41258000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58292 5031 52382 491866 390017 390017 1 VSHVLAALQAGNR Unmodified 1334.7419 0.74188183 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 48.803 49.116 3 0.00057639 55079 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 52.395 43.681 202760000 0 0 0 0 0 23239000 12033000 13915000 10730000 17176000 19066000 14885000 24317000 0 67396000 58293 5187 52383 491867;491868;491869;491870;491871;491872;491873;491874;491875 390018;390019;390020;390021;390022;390023;390024;390025 390019 8 VSHVSTGGGASLELLEGK Unmodified 1739.9054 0.90537792 733;837 P00558;P07205 PGK1;PGK2 Phosphoglycerate kinase 1;Phosphoglycerate kinase 2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3.02 2.26 1 100 48 15 49 63 37 1 1 1 1 1 1 1 2 2 1 1 2 85.52 81.988 2;3 0 85554 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 312.25 277.49 39010000000 14704000000 19173000000 4346400000 4098500 3260800 7659100 5715800 6765200 5356900 11449000 104530000 102250000 7588800 76159000 452060000 58294 733;837 52384 491876;491877;491878;491879;491880;491881;491882;491883;491884;491885;491886;491887;491888;491889;491890;491891;491892;491893;491894;491895;491896;491897;491898;491899;491900;491901;491902;491903;491904;491905;491906;491907;491908;491909;491910;491911;491912;491913;491914;491915;491916;491917;491918;491919;491920;491921;491922;491923;491924;491925;491926;491927;491928;491929;491930;491931;491932;491933;491934;491935;491936;491937;491938;491939;491940;491941;491942;491943;491944;491945;491946;491947;491948;491949;491950;491951;491952;491953;491954;491955;491956;491957;491958;491959;491960;491961;491962;491963;491964;491965;491966;491967;491968;491969;491970;491971;491972;491973;491974;491975;491976;491977;491978;491979;491980;491981;491982;491983;491984;491985;491986;491987;491988;491989;491990;491991;491992;491993;491994;491995;491996;491997;491998;491999;492000;492001;492002;492003;492004;492005;492006;492007;492008;492009;492010;492011;492012;492013;492014;492015;492016;492017;492018;492019;492020;492021;492022;492023;492024;492025;492026;492027;492028;492029;492030;492031;492032;492033;492034;492035;492036;492037;492038;492039 390026;390027;390028;390029;390030;390031;390032;390033;390034;390035;390036;390037;390038;390039;390040;390041;390042;390043;390044;390045;390046;390047;390048;390049;390050;390051;390052;390053;390054;390055;390056;390057;390058;390059;390060;390061;390062;390063;390064;390065;390066;390067;390068;390069;390070;390071;390072;390073;390074;390075;390076;390077;390078;390079;390080;390081;390082;390083;390084;390085;390086;390087;390088;390089;390090;390091;390092;390093;390094;390095;390096;390097;390098;390099;390100;390101;390102;390103;390104;390105;390106;390107;390108;390109;390110;390111;390112;390113;390114;390115;390116;390117;390118;390119;390120;390121;390122;390123;390124;390125;390126;390127;390128;390129;390130;390131;390132;390133;390134;390135;390136;390137;390138;390139;390140;390141;390142;390143;390144;390145;390146;390147;390148;390149;390150;390151;390152;390153;390154;390155;390156;390157;390158;390159;390160;390161;390162;390163;390164;390165;390166;390167;390168;390169;390170;390171;390172;390173;390174;390175;390176;390177;390178;390179;390180;390181;390182;390183;390184;390185;390186;390187;390188;390189;390190;390191;390192;390193;390194;390195;390196;390197;390198;390199;390200;390201;390202;390203;390204;390205;390206;390207;390208;390209;390210;390211;390212;390213;390214;390215;390216;390217;390218;390219;390220;390221;390222;390223;390224;390225;390226;390227;390228;390229;390230;390231;390232;390233;390234;390235;390236;390237;390238;390239;390240;390241;390242;390243;390244;390245;390246;390247;390248;390249;390250;390251;390252;390253;390254;390255;390256;390257;390258;390259;390260;390261;390262;390263;390264;390265;390266;390267;390268;390269;390270;390271;390272;390273;390274;390275;390276;390277;390278 390033 237 VSHYIINSLPNRR Unmodified 1567.8583 0.85830857 1500 P46109 CRKL Crk-like protein yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 2 1 1 1 2 2 2 46.477 46.859 3;4 0.00014807 51361 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.122 51.321 95974000 0 0 0 0 0 6584200 2350300 0 2815400 0 5352500 23837000 0 11011000 44024000 58295 1500 52385 492040;492041;492042;492043;492044;492045;492046;492047;492048;492049;492050 390279;390280;390281;390282 390279 4 VSIAPSQR Unmodified 856.47667 0.47666558 323 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 21.62 21.894 2 0.0082561 22605 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 86.833 62.861 263020000 0 0 0 58020000 0 0 0 0 0 0 0 112000000 92991000 0 0 58296 323 52386 492051;492052;492053 390283 390283 1 VSIDGVEWSDIK Unmodified 1346.6718 0.67179615 2988 Q6VY07 PACS1 Phosphofurin acidic cluster sorting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 79.294 79.474 2 0.007477 91947 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 61.344 45.714 23469000 0 0 0 0 0 0 0 0 0 6814700 8169400 0 0 0 8484600 58297 2988 52387 492054;492055;492056 390284;390285;390286 390286 2 VSILESLDK Unmodified 1002.5597 0.55972651 927 P10644 PRKAR1A cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72.625 71.633 2 0.0039747 81519 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 112.84 75.821 2366000000 80951000 1841900000 126290000 12375000 11646000 34962000 17232000 17618000 15012000 32898000 30738000 32190000 18738000 30518000 62949000 58298 927 52388 492057;492058;492059;492060;492061;492062;492063;492064;492065;492066;492067;492068;492069;492070;492071 390287;390288;390289;390290;390291;390292;390293;390294;390295;390296 390291 8 VSILESLEK Unmodified 1016.5754 0.57537657 1299 P31321 PRKAR1B cAMP-dependent protein kinase type I-beta regulatory subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 76.385 74.808 2 0.00061025 94203 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.52 79.647 238850000 12257000 164950000 27765000 2576400 2072000 4898200 5345800 3115200 0 0 5955700 0 4372800 5539100 0 58299 1299 52389 492072;492073;492074;492075;492076;492077;492078;492079;492080;492081;492082;492083;492084 390297;390298;390299;390300;390301;390302;390303;390304;390305 390299 9 VSILPDVVFDSPLH Unmodified 1536.8188 0.81879474 5019 Q9UMX1 SUFU Suppressor of fused homolog yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 97.607 94.001 2 4.732E-14 115796 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 133.21 122.45 37482000 0 34757000 2725700 0 0 0 0 0 0 0 0 0 0 0 0 58300 5019 52390 492085;492086 390306;390307 390306 2 VSIPVDATESEPK Unmodified 1370.6929 0.69292553 3543 Q8WUF8 FAM172A Protein FAM172A yes yes 0 0 0 By MS/MS 2 0 1 1 58.408 52.577 2 0.014314 67661 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.255 43.584 60668000 0 60668000 0 0 0 0 0 0 0 0 0 0 0 0 0 58301 3543 52391 492087 390308 390308 1 VSIQPLDETAVTDK Unmodified 1514.7828 0.78280317 5068 Q9UQ84 EXO1 Exonuclease 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 65.814 65.447 2 2.2735E-14 82348 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.09 96.804 275460000 0 26707000 0 11967000 14097000 15074000 17241000 16203000 19292000 21549000 26546000 35098000 25249000 18145000 28288000 58302 5068 52392 492088;492089;492090;492091;492092;492093;492094;492095;492096;492097;492098;492099;492100 390309;390310;390311;390312;390313;390314;390315;390316;390317;390318;390319;390320 390312 12 VSIVTPEDILR Unmodified 1240.7027 0.70270235 1741 P54578 USP14 Ubiquitin carboxyl-terminal hydrolase 14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 83.403 83.466 2 1.9285E-05 96801 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 125.57 91.316 489940000 0 0 0 7397200 5764600 36755000 16055000 17195000 16731000 61924000 59674000 56954000 28130000 48956000 134410000 58303 1741 52393 492101;492102;492103;492104;492105;492106;492107;492108;492109;492110;492111;492112 390321;390322;390323;390324;390325;390326;390327;390328;390329;390330;390331;390332 390322 9 VSLAGACGVGGYGSR Unmodified 1409.6721 0.67214728 74 CON__P13647;P13647 KRT5 Keratin, type II cytoskeletal 5 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.33 51.479 2 6.5577E-28 58916 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 172.13 160.53 + 739740000 0 0 0 316320000 55593000 32381000 32568000 43006000 22528000 48113000 36706000 51921000 44672000 32276000 23657000 58304 74 52394 492113;492114;492115;492116;492117;492118;492119;492120;492121;492122;492123;492124 390333;390334;390335;390336;390337;390338;390339;390340;390341;390342;390343;390344;390345 390343 13 VSLAVTDTEK Unmodified 1061.5605 0.56045479 2802 Q5TZF3 ANKRD45 Ankyrin repeat domain-containing protein 45 yes yes 0 0 0 By MS/MS 10 0 1 1 28.775 29.47 2 0.001625 30844 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 104.44 53.371 19700000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19700000 58305 2802 52395 492125 390346 390346 1 VSLDVNHFAPDELTVK Unmodified 1782.9152 0.91521432 786 P04792 HSPB1 Heat shock protein beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.08 2.56 3 23 1 1 1 2 2 2 2 2 2 2 2 2 1 2 2 79.306 79.363 2;3 1.3593E-98 91753 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 218.16 172.56 19603000000 9067300 3758700 1120800 534320000 565260000 1292600000 1007000000 1559300000 1350900000 2450400000 1977800000 2225200000 141450000 1377700000 5107500000 58306 786 52396 492126;492127;492128;492129;492130;492131;492132;492133;492134;492135;492136;492137;492138;492139;492140;492141;492142;492143;492144;492145;492146;492147;492148;492149;492150;492151 390347;390348;390349;390350;390351;390352;390353;390354;390355;390356;390357;390358;390359;390360;390361;390362;390363;390364;390365;390366;390367;390368;390369 390368 22 VSLEDLYNGK Unmodified 1136.5714 0.57135383 440 O60884 DNAJA2 DnaJ homolog subfamily A member 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 70.58 69.366 2 1.0494E-10 83696 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 167.24 125.81 1287600000 21064000 950590000 11271000 13650000 11724000 18690000 17383000 15428000 15781000 32555000 33016000 36614000 22278000 27965000 59601000 58307 440 52397 492152;492153;492154;492155;492156;492157;492158;492159;492160;492161;492162;492163;492164;492165;492166;492167 390370;390371;390372;390373;390374;390375;390376;390377;390378;390379;390380;390381;390382;390383;390384;390385 390376 14 VSLEEIYSGCTK Unmodified 1384.6544 0.65443153 1191;4868 P25685;Q9UDY4 DNAJB1;DNAJB4 DnaJ homolog subfamily B member 1;DnaJ homolog subfamily B member 4 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.01 69.088 2 1.4057E-10 79314 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 159.83 147.78 196500000 0 0 0 8112400 5150100 8563000 10362000 7512200 10678000 16269000 20045000 21273000 14258000 20309000 53965000 58308 1191;4868 52398 492168;492169;492170;492171;492172;492173;492174;492175;492176;492177;492178;492179 390386;390387;390388;390389;390390;390391;390392;390393;390394;390395;390396;390397;390398;390399;390400;390401;390402 390400 17 VSLEETAQLPSAPQGSR Unmodified 1768.8955 0.89554151 4112 Q9BRP8 WIBG Partner of Y14 and mago yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 6.67 3.74 2 2 5 4 1 1 1 1 1 65.855 63.619 2;3 1.3303E-69 79934 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 167.01 149.2 289470000 0 218460000 0 0 3292200 0 0 0 0 0 20273000 14650000 0 10655000 22139000 58309 4112 52399 492180;492181;492182;492183;492184;492185;492186;492187;492188 390403;390404;390405;390406;390407;390408;390409 390403 7 VSLEETAQLPSAPQGSRAAPTAASDQPDSAATTEK Unmodified 3481.6809 0.68086388 4112 Q9BRP8 WIBG Partner of Y14 and mago yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 70.367 64.441 3 1.2487E-118 82811 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.79 129.03 36345000 7849000 26770000 1725900 0 0 0 0 0 0 0 0 0 0 0 0 58310 4112 52400 492189;492190;492191 390410;390411 390410 2 VSLEQQLR Unmodified 971.53999 0.53999412 4386 Q9H3S7 PTPN23 Tyrosine-protein phosphatase non-receptor type 23 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 43.189 43.249 2 0.0083611 47984 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 86.472 40.102 82584000 0 0 0 5508900 5466500 5784300 9435700 6579900 5681500 9877000 10755000 0 11782000 11713000 0 58311 4386 52401 492192;492193;492194;492195;492196;492197;492198;492199;492200;492201 390412;390413;390414;390415;390416 390414 5 VSLLGPVTTPEHQLLK Unmodified 1730.9931 0.99307071 4329 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79.937 78.959 3 1.8279E-08 90614 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.833 64.55 452570000 78842000 14144000 3682300 5003300 15702000 24086000 16056000 30652000 28424000 46005000 38072000 28617000 18435000 33509000 71343000 58312 4329 52402 492202;492203;492204;492205;492206;492207;492208;492209;492210;492211;492212;492213;492214;492215;492216 390417;390418;390419;390420;390421;390422;390423;390424;390425;390426;390427;390428;390429;390430;390431;390432 390421 16 VSLLQGDLSEK Unmodified 1187.6398 0.63976774 3217 Q8IUD2 ERC1 ELKS/Rab6-interacting/CAST family member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 7 3.69 1 1 3 2 1 1 1 63.995 61.806 2 0.00054731 69683 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 91.095 34.664 251710000 0 213260000 0 8721500 0 0 0 0 0 0 0 0 12331000 17402000 0 58313 3217 52403 492217;492218;492219;492220;492221 390433;390434;390435;390436;390437 390435 4 VSLMADGK Oxidation (M) 835.41095 0.41095378 3898 Q96JP5 ZFP91 E3 ubiquitin-protein ligase ZFP91 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 18.518 18.678 2 0.0047719 19018 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 90.308 41.548 129080000 0 0 0 11105000 14226000 12161000 12609000 0 10268000 15834000 10031000 17445000 15381000 10016000 0 58314 3898 52404 492222;492223;492224;492225;492226;492227;492228;492229;492230;492231 390438;390439;390440;390441;390442;390443 390440 5403 6 VSLMADGK Unmodified 819.41604 0.41603916 3898 Q96JP5 ZFP91 E3 ubiquitin-protein ligase ZFP91 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.208 29.399 2 0.018722 31667 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 64.207 29.007 322940000 0 0 0 19261000 19491000 18536000 18089000 16758000 13317000 29297000 30107000 36672000 40470000 35196000 45751000 58315 3898 52404 492232;492233;492234;492235;492236;492237;492238;492239;492240;492241;492242;492243 390444;390445;390446;390447;390448;390449 390448 5 VSLNTYTPAK Unmodified 1092.5815 0.58152458 317 O43314 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 47.987 42.424 2 0.0022297 55140 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107 80.545 78358000 0 78358000 0 0 0 0 0 0 0 0 0 0 0 0 0 58316 317 52405 492244;492245 390450;390451 390450 2 VSLPPIPAVSNIK Unmodified 1333.7969 0.79693709 4758 Q9NZ09 UBAP1 Ubiquitin-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 84.277 84.342 2 0.016274 98014 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 39.657 26.62 210000000 0 0 0 4347500 11325000 14384000 14667000 17600000 13856000 27884000 17127000 25400000 15689000 15997000 31721000 58317 4758 52406 492246;492247;492248;492249;492250;492251;492252;492253;492254;492255;492256;492257 390452 390452 1 VSLQVHPDRVGEGDK Unmodified 1634.8376 0.8376327 3596 Q8WXX5 DNAJC9 DnaJ homolog subfamily C member 9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS 8.72 2.93 4 21 2 2 2 2 2 2 2 2 2 2 1 1 2 1 38.122 37.379 3;4 8.045E-05 40082 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 71.98 61.346 782340000 285470000 0 32515000 43566000 31406000 52991000 40968000 32755000 42354000 23254000 62549000 29005000 19692000 54043000 31778000 58318 3596 52407 492258;492259;492260;492261;492262;492263;492264;492265;492266;492267;492268;492269;492270;492271;492272;492273;492274;492275;492276;492277;492278;492279;492280;492281;492282 390453;390454;390455;390456;390457;390458;390459;390460;390461;390462 390459 9 VSLSAESLLK Unmodified 1045.6019 0.60192568 2567 Q15723 ELF2 ETS-related transcription factor Elf-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.495 73.563 2 0.0024043 84375 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 83.948 38.866 324370000 0 0 0 18707000 24972000 19647000 24890000 22367000 19171000 33065000 29748000 37951000 24024000 31113000 38719000 58319 2567 52408 492283;492284;492285;492286;492287;492288;492289;492290;492291;492292;492293;492294 390463;390464;390465;390466;390467;390468;390469;390470;390471;390472;390473;390474;390475;390476 390466 11 VSLSAPMTTNGLPESTDSK Oxidation (M) 1949.9252 0.92518666 4736 Q9NY27 PPP4R2 Serine/threonine-protein phosphatase 4 regulatory subunit 2 yes yes 0 1 0 By MS/MS 2 0 1 1 62.735 56.842 2 2.5689E-05 72820 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.507 58.31 15167000 0 15167000 0 0 0 0 0 0 0 0 0 0 0 0 0 58320 4736 52409 492295 390477 390477 6115 1 VSLSAPMTTNGLPESTDSK Unmodified 1933.9303 0.93027204 4736 Q9NY27 PPP4R2 Serine/threonine-protein phosphatase 4 regulatory subunit 2 yes yes 0 0 0 By MS/MS By MS/MS 4.67 3.77 2 1 2 1 72.65 69.369 2;3 1.1362E-67 86658 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 148.41 126.36 150690000 0 143870000 0 0 0 0 0 0 0 0 0 0 0 0 6819200 58321 4736 52409 492296;492297;492298 390478;390479;390480;390481;390482 390478 5 VSLSSDTTR Unmodified 964.48254 0.48253882 3746 Q96B01 RAD51AP1 RAD51-associated protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.046 20.247 2 0.0089221 20913 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 68.224 53.811 71787000 0 0 0 3890500 4590600 2213700 7913600 5617800 3073100 6310300 9317300 6722800 6714600 4591100 10831000 58322 3746 52410 492299;492300;492301;492302;492303;492304;492305;492306;492307;492308;492309;492310 390483;390484;390485;390486 390484 4 VSLSSDTTRKPLEIR Unmodified 1700.9421 0.94209778 3746 Q96B01 RAD51AP1 RAD51-associated protein 1 yes yes 0 0 2 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 47.119 47.279 3 0.0010558 52540 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.885 17.087 80761000 0 0 0 3879500 3396300 0 11126000 9343600 3303700 6528800 10228000 12311000 0 5906400 14737000 58323 3746 52411 492311;492312;492313;492314;492315;492316;492317;492318;492319;492320 390487;390488;390489;390490 390490 4 VSLVDLAGSER Unmodified 1144.6088 0.60880197 4350 Q9H1H9 KIF13A Kinesin-like protein KIF13A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.198 69.275 2 0.010622 80485 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 49.35 25.196 116930000 0 0 0 4526800 5210500 13559000 6228700 6448300 5043100 11862000 12133000 14841000 7066500 9512600 20498000 58324 4350 52412 492321;492322;492323;492324;492325;492326;492327;492328;492329;492330;492331;492332 390491;390492;390493;390494;390495 390495 3 VSLVDLAGSERVSK Unmodified 1458.8042 0.80420731 4350 Q9H1H9 KIF13A Kinesin-like protein KIF13A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 73.146 67.526 3 0.00069121 88149 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.405 53.927 74448000 53989000 15649000 4810000 0 0 0 0 0 0 0 0 0 0 0 0 58325 4350 52413 492333;492334;492335 390496;390497;390498 390498 3 VSLVLAPALAACGCK Unmodified 1528.8106 0.81055502 1097 P19971 TYMP Thymidine phosphorylase yes yes 0 0 0 By MS/MS 10 0 1 1 83.218 82.823 2 0.0015187 96135 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 51.092 47.77 7074000 0 0 0 7074000 0 0 0 0 0 0 0 0 0 0 0 58326 1097 52414 492336 390499 390499 1 VSMAIQLTEELK Oxidation (M) 1376.7221 0.72211717 3319 Q8N392 ARHGAP18 Rho GTPase-activating protein 18 yes yes 0 1 0 By MS/MS 2 0 1 1 76.262 71.424 2 0.017356 89270 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.82 20.471 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58327 3319 52415 492337 390500 390500 4908 1 VSMEAVQK Unmodified 890.45315 0.45315295 696 O95825 CRYZL1 Quinone oxidoreductase-like protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 26.66 22.422 2 0.0086489 29457 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.78 62.1 80011000 0 80011000 0 0 0 0 0 0 0 0 0 0 0 0 0 58328 696 52416 492338;492339 390501 390501 1 VSMEEQR Unmodified 877.39637 0.39636635 1752 P55036 PSMD4 26S proteasome non-ATPase regulatory subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 10.907 11.033 2 0.025177 9407 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 81.297 56.298 69511000 0 0 0 5598400 3484000 0 4456000 5349500 3239100 5654200 26930000 8707100 6092400 0 0 58329 1752 52417 492340;492341;492342;492343;492344;492345;492346;492347;492348 390502 390502 1 VSMEPSER Oxidation (M) 949.4175 0.41749572 2833 Q5VZK9 LRRC16A Leucine-rich repeat-containing protein 16A yes yes 0 1 0 By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 7.0967 7.2173 2 0.044522 4193 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 42.869 25.484 37877000 0 0 0 1853600 2208400 4811100 2999500 0 2514900 5506100 3440100 2844800 4284500 3059300 4354500 58330 2833 52418 492349;492350;492351;492352;492353;492354;492355;492356;492357;492358;492359 390503 390503 1 VSMMLVQK 2 Oxidation (M) 966.48782 0.48782389 2996 Q6YHU6 THADA Thyroid adenoma-associated protein yes yes 0 2 0 By MS/MS 2 0 1 1 22.546 18.663 2 0.042412 25184 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.717 25.159 13452000 0 13452000 0 0 0 0 0 0 0 0 0 0 0 0 0 58331 2996 52419 492360 390504 390504 0 VSMNQLSQQK Oxidation (M) 1177.5761 0.57612163 2932 Q6P3W7 SCYL2 SCY1-like protein 2 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 1 2 2 2 2 2 1 2 2 2 2 13.479 13.638 2 0.00060702 12359 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 113.71 80.866 173310000 0 0 0 10215000 5717200 12289000 14798000 13136000 14427000 14974000 6632300 20541000 24617000 15813000 20154000 58332 2932 52420 492361;492362;492363;492364;492365;492366;492367;492368;492369;492370;492371;492372;492373;492374;492375;492376;492377;492378;492379;492380;492381;492382 390505;390506;390507;390508;390509;390510;390511;390512;390513;390514;390515;390516;390517;390518 390512 4568 8 VSMNQLSQQK Unmodified 1161.5812 0.58120701 2932 Q6P3W7 SCYL2 SCY1-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.524 32.711 2 7.7297E-10 35610 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 164.96 130.7 252680000 0 0 0 10990000 13943000 19306000 16248000 21448000 20624000 23725000 24850000 26874000 23786000 19380000 31507000 58333 2932 52420 492383;492384;492385;492386;492387;492388;492389;492390;492391;492392;492393;492394 390519;390520;390521;390522;390523;390524;390525;390526;390527;390528;390529;390530 390526 8 VSMPDVDLNLK Unmodified 1229.6326 0.63257388 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.309 78.367 2 0.00028318 89677 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 93.111 75.202 155710000 0 0 0 5054400 6389000 9830200 6996900 16029000 8252200 13095000 13707000 19136000 13384000 18438000 25397000 58334 2172 52421 492395;492396;492397;492398;492399;492400;492401;492402;492403;492404;492405;492406 390531;390532;390533;390534;390535;390536;390537;390538;390539;390540;390541;390542 390538 12 VSMPDVDLNLK Oxidation (M) 1245.6275 0.6274885 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 61.806 61.85 2 0.0031828 70892 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 60.518 41.415 42841000 0 0 0 2304700 3781100 0 0 5233400 5517000 0 5593700 9842400 5428900 5140200 0 58335 2172 52421 492407;492408;492409;492410;492411;492412;492413;492414 390543;390544 390543 3544 2 VSMPDVELNLK Unmodified 1243.6482 0.64822394 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 79.268 78.958 2 6.3305E-05 91720 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 113.62 82.548 396040000 0 212240000 0 3632400 9854000 9731400 8581900 16871000 11779000 12456000 14654000 22242000 14484000 20441000 39076000 58336 2172 52422 492415;492416;492417;492418;492419;492420;492421;492422;492423;492424;492425;492426;492427 390545;390546;390547;390548;390549;390550;390551;390552;390553;390554;390555;390556;390557;390558;390559;390560 390555 16 VSMPDVELNLK Oxidation (M) 1259.6431 0.64313856 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 2 2 1 63.312 63.546 2 0.00092997 72198 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 72.928 43.455 57736000 0 0 0 0 0 0 0 10044000 14780000 0 0 0 20675000 0 12237000 58337 2172 52422 492428;492429;492430;492431;492432;492433;492434 390561;390562;390563;390564;390565 390563 3545 5 VSMVGQVK Oxidation (M) 862.45824 0.45823833 5221 Q9Y570 PPME1 Protein phosphatase methylesterase 1 yes yes 0 1 0 By MS/MS 10 0 1 1 12.306 12.549 2 0.048323 10641 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 41.892 17.693 1825500 0 0 0 0 0 0 0 0 0 0 0 0 0 1825500 0 58338 5221 52423 492435 390566 390566 1 VSMVGQVK Unmodified 846.46332 0.4633237 5221 Q9Y570 PPME1 Protein phosphatase methylesterase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 27.784 28.057 2 0.042322 30456 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 49.65 25.677 143170000 0 0 0 7197600 0 9774900 0 7936200 6954900 11815000 15819000 22667000 10897000 16931000 33178000 58339 5221 52423 492436;492437;492438;492439;492440;492441;492442;492443;492444;492445 390567 390567 1 VSMVHGSSLETLPSCPAVTGQK Unmodified 2284.1192 0.11915222 4959 Q9UKA4 AKAP11 A-kinase anchor protein 11 yes yes 0 0 0 By MS/MS 2 0 1 1 75.638 67.508 3 0.0021695 89164 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.381 33.283 10165000 10165000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58340 4959 52424 492446 390568 390568 1 VSNENLDYAILK Unmodified 1377.714 0.71399532 2967 Q6SJ93 FAM111B Protein FAM111B yes yes 0 0 0 By MS/MS 2 0 1 1 75.705 70.764 2 0.0033995 88499 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.916 52.518 49240000 0 49240000 0 0 0 0 0 0 0 0 0 0 0 0 0 58341 2967 52425 492447 390569 390569 1 VSNGAGTMSVSLVADENPFAQGALK Oxidation (M) 2478.2061 0.20605297 819 P06396 GSN Gelsolin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 84.867 83.95 3 5.2311E-15 97472 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 65.901 45.926 + 66219000 0 34364000 0 0 8143300 0 0 6203600 0 8778700 8729900 0 0 0 0 58342 819 52426 492448;492449;492450;492451;492452 390570;390571;390572;390573;390574 390572 985 5 VSNIFDDPLNAFGGQ Unmodified 1592.7471 0.74708636 2840;5195 Q641Q2;Q5SRD0;Q9Y4E1 FAM21A;FAM21D;FAM21C WASH complex subunit FAM21A;Putative WASH complex subunit FAM21;WASH complex subunit FAM21C no no 0 0 0 By MS/MS By MS/MS 1.5 0.5 1 1 1 1 101.6 101.85 2 3.95E-72 114207 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 196.11 181.96 197570000 11656000 185910000 0 0 0 0 0 0 0 0 0 0 0 0 0 58343 2840;5195 52427 492453;492454 390575;390576;390577 390575 3 VSNISADDMLYTETDLEESMDK Oxidation (M) 2521.0724 0.072380764 4963 Q9UKF6 CPSF3 Cleavage and polyadenylation specificity factor subunit 3 yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 82.644 78.635 3 0.00058539 97769 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 50.029 46.755 20741000 0 20741000 0 0 0 0 0 0 0 0 0 0 0 0 0 58344 4963 52428 492455;492456 390578 390578 6312 1 VSNISADDMLYTETDLEESMDK Unmodified 2505.0775 0.077466142 4963 Q9UKF6 CPSF3 Cleavage and polyadenylation specificity factor subunit 3 yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 89.256 84.937 2;3 3.655E-88 105462 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 204.07 201.75 81866000 0 81866000 0 0 0 0 0 0 0 0 0 0 0 0 0 58345 4963 52428 492457;492458;492459 390579;390580;390581 390579 3 VSNLEELPLNEYR Unmodified 1574.794 0.79403656 4114 Q9BRQ8 AIFM2 Apoptosis-inducing factor 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.804 76.861 2 1.4419E-05 88732 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 90.653 58.13 57443000 0 0 0 2787700 3735700 5322600 3505500 4974200 4806900 5924400 6390500 8287200 0 5237100 6471200 58346 4114 52429 492460;492461;492462;492463;492464;492465;492466;492467;492468;492469;492470 390582;390583;390584;390585;390586 390583 5 VSNLQVSPK Unmodified 970.54475 0.54474515 156 O00443 PIK3C2A Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 26.91 26.686 2 0.023396 33537 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.23 33.438 56070000 0 23170000 0 0 2820200 2426300 3347400 4410900 2603100 3119500 3552000 0 3821300 3057700 3741400 58347 156 52430 492471;492472;492473;492474;492475;492476;492477;492478;492479;492480;492481 390587;390588;390589 390588 3 VSNQVAVNMYK Oxidation (M) 1267.6231 0.62307182 1852 P61599 NAA20 N-alpha-acetyltransferase 20 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 29.913 30.174 2 0.0041467 32608 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 56.916 42.913 36896000 0 0 0 0 0 0 14261000 14618000 6392000 0 0 1625400 0 0 0 58348 1852 52431 492482;492483;492484;492485 390590;390591;390592 390590 3006 3 VSNQVAVNMYK Unmodified 1251.6282 0.6281572 1852 P61599 NAA20 N-alpha-acetyltransferase 20 yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 43.826 43.95 2 9.9995E-05 49145 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 140.88 120.55 92237000 0 0 0 0 0 0 24875000 49000000 18362000 0 0 0 0 0 0 58349 1852 52431 492486;492487;492488 390593;390594 390594 2 VSNSGITR Unmodified 832.44028 0.44028008 1642 P50991 CCT4 T-complex protein 1 subunit delta yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 8.2136 8.3444 2 0.0048728 6092 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 109.01 54.487 181560000 0 0 0 12540000 9945500 19403000 13942000 13225000 12766000 11370000 29079000 18000000 12340000 8709400 20245000 58350 1642 52432 492489;492490;492491;492492;492493;492494;492495;492496;492497;492498;492499;492500 390595;390596;390597;390598;390599;390600;390601;390602;390603;390604;390605 390599 10 VSNSGITRVEK Unmodified 1188.6463 0.64625011 1642 P50991 CCT4 T-complex protein 1 subunit delta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.33 6 2 25 2 4 2 3 2 2 2 2 2 2 2 2 2 2 2 17.22 16.428 2;3 1.2542E-15 24689 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 189.58 124.74 11639000000 5406500000 1835900000 1943900000 98183000 87083000 150350000 147270000 106360000 115020000 163820000 224930000 314110000 213280000 265180000 567240000 58351 1642 52433 492501;492502;492503;492504;492505;492506;492507;492508;492509;492510;492511;492512;492513;492514;492515;492516;492517;492518;492519;492520;492521;492522;492523;492524;492525;492526;492527;492528;492529;492530;492531;492532;492533 390606;390607;390608;390609;390610;390611;390612;390613;390614;390615;390616;390617;390618;390619;390620;390621;390622;390623;390624;390625;390626;390627;390628;390629;390630;390631;390632;390633;390634;390635;390636;390637;390638;390639 390620 24 VSPAGGTLDDKPK Unmodified 1283.6721 0.67213051 3598 Q8WY36 BBX HMG box transcription factor BBX yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 20.823 20.902 3 0.038983 21862 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 29.981 18.768 54913000 0 0 0 5400000 6219400 7741600 0 6477900 5174300 11872000 12028000 0 0 0 0 58352 3598 52434 492534;492535;492536;492537;492538;492539;492540 390640 390640 1 VSPDMAIFITMNPGYAGR 2 Oxidation (M) 1970.923 0.92301859 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 2 0 By matching By matching By matching By matching By matching By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 78.88 79.025 2 0.00019843 91757 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 51.875 36.999 32780000 0 0 0 0 0 3528300 0 2608400 3054100 4697900 3505700 6713600 4060600 0 4611800 58353 2392 52435 492541;492542;492543;492544;492545;492546;492547;492548 390641 390641 3925;3926 1 VSPEEAIK Unmodified 871.4651 0.46509784 804 P05198 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 28.271 28.366 2 0.028474 30107 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 56.721 26.109 205210000 0 0 0 16903000 15735000 19925000 14886000 15383000 12915000 24118000 41124000 0 20273000 23943000 0 58354 804 52436 492549;492550;492551;492552;492553;492554;492555;492556;492557;492558 390642;390643 390642 2 VSPENLVDK Unmodified 999.52368 0.52367535 488 O75376 NCOR1 Nuclear receptor corepressor 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 41.687 41.894 2 0.035371 46142 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 46.129 9.4276 59026000 0 0 0 4111100 0 5467800 4430900 0 6584300 8235800 0 12119000 0 7078100 10999000 58355 488 52437 492559;492560;492561;492562;492563;492564;492565;492566 390644 390644 1 VSPGLPSPNLENGAPAVGPVQPR Unmodified 2252.1913 0.1913296 4885 Q9UGP4 LIMD1 LIM domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.932 78.99 3 0.00013282 91079 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 40.012 35.659 102170000 0 0 0 3775100 5235400 8162700 4584700 9001400 4715700 8735400 9725500 9158500 6176300 10353000 22545000 58356 4885 52438 492567;492568;492569;492570;492571;492572;492573;492574;492575;492576;492577;492578 390645;390646;390647;390648;390649;390650;390651;390652;390653;390654;390655 390646 11 VSPIQIDGAGR Unmodified 1111.5986 0.59857163 3449 Q8NFQ8 TOR1AIP2 Torsin-1A-interacting protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 48.717 48.854 2 0.021343 54939 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 42.336 26.674 26485000 0 0 0 0 0 7690800 0 5869800 4314300 8610100 0 0 0 0 0 58357 3449 52439 492579;492580;492581;492582 390656 390656 1 VSPLASDRR Unmodified 999.54614 0.54614213 3542 Q8WUF5 PPP1R13L RelA-associated inhibitor yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 14.382 14.571 2 0.02975 13235 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.22 74.724 118180000 0 0 0 0 4816900 8599800 7891200 10942000 6294100 14026000 14654000 12037000 15000000 9454900 14469000 58358 3542 52440 492583;492584;492585;492586;492587;492588;492589;492590;492591;492592;492593 390657;390658;390659;390660 390657 4 VSPPAPGSAPETPEDK Unmodified 1577.7573 0.7573167 2295 Q13459 MYO9B Unconventional myosin-IXb yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 39.075 39.241 2 0.00033052 43434 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 66.498 50.273 55799000 0 0 0 4433500 3948100 4386700 4055300 0 5751100 4259200 6940300 9025600 0 5172800 7826700 58359 2295 52441 492594;492595;492596;492597;492598;492599;492600;492601;492602;492603;492604 390661;390662;390663;390664;390665;390666;390667;390668;390669;390670 390666 10 VSPPEGAETRK Unmodified 1169.6041 0.60405094 3251 Q8IWZ8 SUGP1 SURP and G-patch domain-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 2 1 1 1 1 12.978 13.16 3 0.013874 11333 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 29.341 22.367 87917000 0 0 0 5467200 4942800 5554100 7333500 5230300 5968300 11461000 9412200 7629100 10437000 5940100 8541000 58360 3251 52442 492605;492606;492607;492608;492609;492610;492611;492612;492613;492614;492615;492616;492617 390671;390672;390673;390674;390675 390675 5 VSPSDTTPLVSR Unmodified 1257.6565 0.65648044 4517 Q9HCK8 CHD8 Chromodomain-helicase-DNA-binding protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 43.372 43.55 2 0.0065461 48435 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 60.434 34.875 96215000 0 0 0 5191600 6312900 7421500 7990400 4913900 0 7019100 10445000 15397000 7674900 7180500 16667000 58361 4517 52443 492618;492619;492620;492621;492622;492623;492624;492625;492626;492627;492628 390676;390677;390678;390679 390679 4 VSPSFSAELK Unmodified 1063.555 0.55497548 2283 Q13416 ORC2 Origin recognition complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 6 4 3 3 1 1 1 1 1 1 56.399 53.595 2 0.019871 68759 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.841 31.948 220010000 8218100 159670000 5942300 0 0 0 0 0 0 14449000 0 0 12129000 0 19599000 58362 2283 52444 492629;492630;492631;492632;492633;492634 390680;390681;390682;390683 390681 4 VSPSPSQESLSSSK Unmodified 1418.6889 0.68890278 2734 Q5JSH3 WDR44 WD repeat-containing protein 44 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 26.575 26.778 2 0.0030055 27472 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.917 24.766 37510000 0 0 0 2502400 1919200 1740000 2391900 0 2018200 3712000 4579800 6579100 2623800 3455500 5987600 58363 2734 52445 492635;492636;492637;492638;492639;492640;492641;492642;492643;492644;492645 390684;390685;390686;390687 390684 4 VSPSTSYTPSR Unmodified 1180.5724 0.57241646 4143 Q9BTE3 MCMBP Mini-chromosome maintenance complex-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 26.451 26.365 2 0.0057813 28480 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 87.806 73.133 38179000 0 0 0 5198300 5630300 12012000 7563200 0 7774400 0 0 0 0 0 0 58364 4143 52446 492646;492647;492648;492649;492650 390688;390689;390690;390691 390688 0 VSPTEIVLESFHK Unmodified 1484.7875 0.78749461 2393 Q14207 NPAT Protein NPAT yes yes 0 0 0 By MS/MS 2 0 1 1 90.387 82.256 3 0.0044446 106913 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 41.996 32.946 5963200 5963200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58365 2393 52447 492651 390692 390692 1 VSPTGAAGR Unmodified 814.42972 0.42971539 2381 Q14160 SCRIB Protein scribble homolog yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 8.0958 8.2202 2 0.017806 5999 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 55.37 29.261 39239000 0 0 0 3947100 2488200 670250 2933300 3427700 3234900 4212500 8054900 0 5114000 3704200 1451800 58366 2381 52448 492652;492653;492654;492655;492656;492657;492658;492659;492660;492661;492662 390693 390693 1 VSPTNMQGFTK Unmodified 1208.586 0.58595803 280 O15379 HDAC3 Histone deacetylase 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 44.15 44.573 2 0.00028804 48796 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 99.973 86.519 86152000 0 0 0 0 0 0 0 11208000 0 14687000 13639000 14502000 0 14905000 17211000 58367 280 52449 492663;492664;492665;492666;492667;492668;492669;492670;492671 390694;390695;390696;390697;390698;390699;390700;390701;390702;390703 390698 10 VSQAAADLK Unmodified 901.4869 0.48689592 1947 P63218 GNG5 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5 yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 20.41 16.212 2 0.0097659 21277 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.67 19.501 115890000 5142300 110750000 0 0 0 0 0 0 0 0 0 0 0 0 0 58368 1947 52450 492672;492673 390704;390705 390704 2 VSQEHPVVLTK Unmodified 1235.6874 0.68738664 1300 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 27.511 27.891 2 0.0040305 29738 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 62.466 28.213 25045000 0 0 0 0 0 0 2341000 0 0 0 8300300 0 3768400 0 10635000 58369 1300 52451 492674;492675;492676;492677 390706;390707;390708 390707 2 VSQEILELLNTTTAK Unmodified 1658.9091 0.90906631 3141 Q86U44 METTL3 N6-adenosine-methyltransferase 70 kDa subunit yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 92.677 88.993 2 0.013807 107605 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 61.435 54.307 23519000 0 21547000 1972100 0 0 0 0 0 0 0 0 0 0 0 0 58370 3141 52452 492678;492679 390709 390709 1 VSQGQLVVMQPEK Unmodified 1441.7599 0.75989966 982 P13667 PDIA4 Protein disulfide-isomerase A4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 3 1 1 1 1 1 1 1 1 1 1 55.786 54.152 2;3 5.4196E-34 69304 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 177.1 158.83 1208800000 20910000 862430000 0 22824000 0 15214000 15556000 23265000 15362000 25123000 53267000 37703000 0 24860000 92282000 58371 982 52453 492680;492681;492682;492683;492684;492685;492686;492687;492688;492689;492690;492691;492692;492693 390710;390711;390712;390713;390714;390715;390716;390717;390718;390719;390720;390721;390722;390723;390724;390725 390714 16 VSQGQLVVMQPEK Oxidation (M) 1457.7548 0.75481428 982 P13667 PDIA4 Protein disulfide-isomerase A4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.42 3.66 3 1 8 1 2 1 1 1 1 1 1 1 1 1 42.305 40.644 2 7.0759E-41 51855 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 190.36 172.09 353720000 16122000 164930000 2580600 16594000 11883000 10874000 18273000 0 0 0 36170000 18243000 20738000 0 37312000 58372 982 52453 492694;492695;492696;492697;492698;492699;492700;492701;492702;492703;492704;492705 390726;390727;390728;390729;390730;390731;390732;390733;390734;390735;390736 390728 1326 11 VSQGSKDPAEGDGAQPEETPR Unmodified 2153.9825 0.98251862 2441 Q14697 GANAB Neutral alpha-glucosidase AB yes yes 0 0 1 By matching By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 21.632 21.964 3 0.0015777 21990 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 29.807 26.145 17941000 0 0 0 0 1362900 0 0 0 0 0 0 7441900 0 3355200 5780600 58373 2441 52454 492706;492707;492708;492709 390737;390738 390737 2 VSQGVEDGPDTK Unmodified 1230.5728 0.57281039 4838 Q9UBE0 SAE1 SUMO-activating enzyme subunit 1;SUMO-activating enzyme subunit 1, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.53 3.84 2 3 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 25.352 25.255 2 3.3732E-16 92723 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 176.6 160.06 449110000 141750000 122470000 2002000 6695300 4015700 8421600 4800200 5457500 3456600 9836100 25197000 19478000 8403900 21582000 65546000 58374 4838 52455 492710;492711;492712;492713;492714;492715;492716;492717;492718;492719;492720;492721;492722;492723;492724;492725;492726 390739;390740;390741;390742;390743;390744;390745;390746;390747;390748;390749;390750;390751 390744 12 VSQLDIQIK Unmodified 1042.6023 0.60226003 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 62.393 60.534 2 0.0031933 77803 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.16 96.052 234700000 8092800 197110000 1777200 1818400 1627600 0 1662900 1460800 0 1793400 5094800 0 0 5670800 8592200 58375 2495 52456 492727;492728;492729;492730;492731;492732;492733;492734;492735;492736;492737;492738;492739 390752;390753;390754;390755;390756;390757;390758;390759;390760 390752 8 VSQLQER Unmodified 858.45593 0.45593014 1380 P36871 PGM1 Phosphoglucomutase-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 10.88 10.977 2 0.02336 8664 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 89.369 16.58 81233000 0 0 0 1917200 1132500 2400300 2375000 1556300 1121400 2778300 0 0 1699400 11733000 54520000 58376 1380 52457 492740;492741;492742;492743;492744;492745;492746;492747;492748;492749 390761;390762 390762 2 VSQLYMNPK Oxidation (M) 1094.543 0.54303059 828 P06737 PYGL Glycogen phosphorylase, liver form yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 30.254 25.859 2 0.0089898 33664 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.095 65.536 42986000 0 42986000 0 0 0 0 0 0 0 0 0 0 0 0 0 58377 828 52458 492750;492751 390763 390763 1003 1 VSQLYMNPK Unmodified 1078.5481 0.54811597 828 P06737 PYGL Glycogen phosphorylase, liver form yes yes 0 0 0 By MS/MS 2 0 1 1 45.042 38.177 2 0.039868 52386 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.241 45.081 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58378 828 52458 492752 390764 390764 1 VSQMAQYFEPLTLAAVGAASK Oxidation (M) 2197.1089 0.10890511 5187 Q9Y490 TLN1 Talin-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 91.059 90.092 2;3 9.3748E-10 104283 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.675 65.387 48480000 0 14667000 0 1479100 0 0 0 0 0 12266000 0 0 0 4671000 15396000 58379 5187 52459 492753;492754;492755;492756;492757 390765;390766;390767 390767 6576 3 VSQMAQYFEPLTLAAVGAASK Unmodified 2181.114 0.11399049 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS 2 0 1 1 98.451 90.321 3 0.0084058 116516 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 29.198 25.81 20690000 20690000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58380 5187 52459 492758 390768 390768 1 VSQPEVGAAIK Unmodified 1097.6081 0.60807369 4739 Q9NYB0 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40.154 39.449 2 0.0048387 49471 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.264 48.888 301750000 5894200 170150000 0 5036100 5201400 7058000 8082100 7216100 6092600 10366000 16943000 17159000 8592300 10526000 23438000 58381 4739 52460 492759;492760;492761;492762;492763;492764;492765;492766;492767;492768;492769;492770;492771;492772 390769;390770;390771;390772;390773;390774;390775 390771 6 VSQPIEGHAAAFAEFK Unmodified 1700.8522 0.85222014 1723 P53675 CLTCL1 Clathrin heavy chain 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 72.914 68.695 3 0.0025181 87478 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 52.172 42.87 23032000 0 15781000 7251000 0 0 0 0 0 0 0 0 0 0 0 0 58382 1723 52461 492773;492774 390776;390777 390776 2 VSQPIEGHAASFAQFK Unmodified 1715.8631 0.86311917 2040 Q00610 CLTC Clathrin heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.14 3.73 9 4 22 7 4 2 1 2 2 2 1 2 2 2 2 2 2 2 63.815 61.848 2;3 5.6415E-05 84600 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.983 67.413 10332000000 4050100000 3110400000 1658400000 45971000 49111000 106950000 71870000 101380000 47836000 146040000 150380000 172890000 134450000 142060000 344140000 58383 2040 52462 492775;492776;492777;492778;492779;492780;492781;492782;492783;492784;492785;492786;492787;492788;492789;492790;492791;492792;492793;492794;492795;492796;492797;492798;492799;492800;492801;492802;492803;492804;492805;492806;492807;492808;492809 390778;390779;390780;390781;390782;390783;390784;390785;390786;390787;390788;390789;390790;390791;390792;390793;390794;390795;390796;390797;390798;390799;390800;390801;390802;390803;390804;390805;390806;390807 390795 25 VSQPTAEQAQAFK Unmodified 1403.7045 0.70449327 919 P10398 ARAF Serine/threonine-protein kinase A-Raf yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 38.608 38.362 2 1.1539E-08 41591 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.31 94.68 232970000 0 63810000 0 8959200 11189000 0 10253000 14297000 11164000 16996000 22354000 20193000 15451000 15784000 22519000 58384 919 52463 492810;492811;492812;492813;492814;492815;492816;492817;492818;492819;492820;492821 390808;390809;390810;390811;390812;390813;390814;390815;390816;390817;390818;390819;390820 390812 13 VSQQILEK Unmodified 943.53385 0.53384611 4445 Q9H845 ACAD9 Acyl-CoA dehydrogenase family member 9, mitochondrial yes yes 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 27.383 27.586 2 0.02128 29953 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 62.107 24.948 11694000 0 0 0 4154800 0 0 0 3299000 0 0 0 4240700 0 0 0 58385 4445 52464 492822;492823;492824 390821 390821 1 VSQTPESLDFLK Unmodified 1362.7031 0.70309628 2215 Q12965 MYO1E Unconventional myosin-Ie yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.521 76.576 2 0.0011306 88452 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 82.029 66.878 122530000 0 0 0 7341300 8176600 11147000 8669100 8863500 7718100 12027000 11251000 20455000 0 8996300 17882000 58386 2215 52465 492825;492826;492827;492828;492829;492830;492831;492832;492833;492834;492835;492836 390822;390823;390824;390825;390826;390827;390828;390829;390830 390826 8 VSQTPIAAGTGPNFSLSDLESSSYYSMSPGAMR 2 Oxidation (M) 3439.5548 0.55480043 2199 Q12857 NFIA Nuclear factor 1 A-type yes yes 0 2 0 By MS/MS By MS/MS 10 0 2 1 1 86.966 87.122 3 7.6156E-15 100984 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 44.616 42.711 14509000 0 0 0 0 0 0 0 0 0 10062000 4448000 0 0 0 0 58387 2199 52466 492837;492838 390831;390832 390831 3570;3571 2 VSQVIMEK Unmodified 932.5001 0.50010314 505 O75475 PSIP1 PC4 and SFRS1-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 29.715 29.227 2 0.0058845 32161 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 105.14 55.546 310620000 0 89052000 0 14715000 10636000 16642000 13502000 10350000 14778000 19768000 22717000 26843000 17175000 14160000 40281000 58388 505 52467 492839;492840;492841;492842;492843;492844;492845;492846;492847;492848;492849;492850;492851;492852 390833;390834;390835;390836;390837;390838;390839;390840;390841;390842;390843;390844;390845 390845 11 VSQVIMEK Oxidation (M) 948.49502 0.49501776 505 O75475 PSIP1 PC4 and SFRS1-interacting protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 18.563 18.734 2 0.029672 19293 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 92.491 49.277 90129000 0 0 0 8151100 8508900 0 9986700 6048300 6754000 12238000 0 12539000 8937300 0 16965000 58389 505 52467 492853;492854;492855;492856;492857;492858;492859;492860;492861 390846;390847;390848 390848 1 VSRDTLYEAVR Unmodified 1307.6834 0.68336389 1927 P62906 RPL10A 60S ribosomal protein L10a yes yes 0 0 1 By MS/MS By matching By MS/MS 10 0 3 1 1 1 44.266 44.297 3 0.015903 48878 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 33.782 20.193 125900000 0 0 0 0 49493000 0 0 0 0 0 0 0 43406000 33000000 0 58390 1927 52468 492862;492863;492864 390849 390849 1 VSREELSQETQTR Unmodified 1561.7696 0.76961272 3666 Q92817 EVPL Envoplakin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 23.873 23.987 3 0.0035239 25183 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 49.298 42.13 18891000 0 0 0 0 2366900 1990300 1769000 5571900 832110 0 3890800 0 0 2469700 0 58391 3666 52469 492865;492866;492867;492868;492869;492870;492871;492872 390850;390851 390850 2 VSRLEEELANLK Unmodified 1399.7671 0.76709352 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 1 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 71.311 71.504 3 0.029344 81588 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 23.817 15.103 11129000 0 0 0 0 0 1285900 0 0 0 1368200 3171000 0 0 0 5304000 58392 2446 52470 492873;492874;492875;492876 390852 390852 1 VSRMEDTSFPSGGNAIGVNSASSK Oxidation (M) 2413.118 0.11796624 3371 Q8N8S7 ENAH Protein enabled homolog yes yes 0 1 1 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 53.802 48.93 3 1.3289E-05 61476 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 65.428 64.546 86247000 0 35695000 50552000 0 0 0 0 0 0 0 0 0 0 0 0 58393 3371 52471 492877;492878;492879 390853;390854;390855 390855 4946 3 VSRMEDTSFPSGGNAIGVNSASSK Unmodified 2397.1231 0.12305162 3371 Q8N8S7 ENAH Protein enabled homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 62.823 56.834 3 2.194E-31 75601 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.786 79.265 109590000 41535000 45573000 22484000 0 0 0 0 0 0 0 0 0 0 0 0 58394 3371 52471 492880;492881;492882 390856;390857;390858 390857 3 VSRNLESHLMSPAEIPGQPVPK Unmodified 2385.2475 0.24746427 4596 Q9NRA8 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter yes yes 0 0 1 By MS/MS 2 0 1 1 77.662 69.532 4 0.0044929 91601 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 39.647 31.558 10412000 10412000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58395 4596 52472 492883 390859 390859 1 VSRPENEQLR Unmodified 1226.6367 0.63674805 3415 Q8ND56 LSM14A Protein LSM14 homolog A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 15.195 15.369 3 0.017711 14851 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 45.433 30.421 109860000 0 0 0 0 9891000 0 0 9304500 8337300 13433000 39315000 0 29575000 0 0 58396 3415 52473 492884;492885;492886;492887;492888;492889 390860;390861;390862;390863;390864 390860 3 VSRPENEQLRNDNK Unmodified 1697.8445 0.844509 3415 Q8ND56 LSM14A Protein LSM14 homolog A yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.3 2.25 2 21 1 1 2 1 2 2 2 2 1 1 2 2 2 2 11.554 11.359 3;4 0.00074047 16619 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.11 82.385 1007600000 118360000 8244700 0 122010000 27512000 69884000 64877000 65239000 64481000 44456000 39119000 107500000 98204000 76243000 101460000 58397 3415 52474 492890;492891;492892;492893;492894;492895;492896;492897;492898;492899;492900;492901;492902;492903;492904;492905;492906;492907;492908;492909;492910;492911;492912 390865;390866;390867;390868;390869;390870;390871 390866 7 VSRPLELCYAPTK Unmodified 1532.8021 0.80209882 2130 Q06587 RING1 E3 ubiquitin-protein ligase RING1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 56.253 55.684 3 8.6482E-11 62478 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 100.54 79.312 186530000 10734000 0 0 9544200 7984700 14872000 0 9856500 13085000 14763000 20463000 24535000 16217000 18244000 26229000 58398 2130 52475 492913;492914;492915;492916;492917;492918;492919;492920;492921;492922;492923;492924 390872;390873;390874;390875;390876;390877;390878;390879;390880;390881;390882;390883 390881 12 VSSAEGAAKEEPK Unmodified 1301.6463 0.64630969 798 P05114 HMGN1 Non-histone chromosomal protein HMG-14 yes yes 0 0 1 By MS/MS By MS/MS By matching 2.17 0.373 5 1 2 3 1 11.889 8.5415 2;3 0.0022584 11526 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.964 46.734 664540000 18917000 643790000 1829600 0 0 0 0 0 0 0 0 0 0 0 0 58399 798 52476 492925;492926;492927;492928;492929;492930 390884;390885;390886;390887 390884 2 VSSDNVADLHEK Unmodified 1312.6259 0.62590859 1231 P28074 PSMB5 Proteasome subunit beta type-5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.44 1.97 1 1 25 2 2 2 2 2 3 1 2 2 2 2 2 3 24.239 24.128 2;3 6.5697E-08 24745 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 118.23 86.811 746180000 0 12510000 0 41163000 14343000 19446000 19051000 27861000 8849400 24007000 116280000 102650000 24934000 81693000 253390000 58400 1231 52477 492931;492932;492933;492934;492935;492936;492937;492938;492939;492940;492941;492942;492943;492944;492945;492946;492947;492948;492949;492950;492951;492952;492953;492954;492955;492956;492957 390888;390889;390890;390891;390892;390893;390894;390895;390896;390897;390898;390899;390900;390901;390902;390903;390904;390905;390906;390907;390908;390909;390910;390911;390912 390907 18 VSSDTLETIAPGHDCCETVK Unmodified 2217.9882 0.98819762 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 61.516 56.169 3 6.144E-10 72455 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.011 79.641 83561000 0 83561000 0 0 0 0 0 0 0 0 0 0 0 0 0 58401 2193 52478 492958;492959 390913;390914 390913 2 VSSDVIDQK Unmodified 989.50294 0.50293991 5084 Q9Y262 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 23.159 23.343 2 0.0082186 24605 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 70.256 30.61 254160000 0 0 0 13860000 12663000 0 17599000 14095000 0 25168000 40045000 0 34810000 35858000 60062000 58402 5084 52479 492960;492961;492962;492963;492964;492965;492966;492967;492968;492969 390915;390916;390917;390918;390919;390920 390915 4 VSSFVPDLK Unmodified 990.5386 0.53859714 3153 Q86US8 SMG6 Telomerase-binding protein EST1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 66.018 65.892 2 0.023114 75749 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 51.193 24.5 17018000 0 0 0 3011800 1768800 3004400 1887400 0 0 0 0 0 4338500 3006700 0 58403 3153 52480 492970;492971;492972;492973;492974;492975 390921;390922;390923;390924 390924 4 VSSGYVPPPVATPFSSK Unmodified 1718.8879 0.88793694 2595 Q15942 ZYX Zyxin yes yes 0 0 0 By MS/MS 10 0 1 1 76.367 76.525 2 0.0052115 88022 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 39.73 33.49 9506800 0 0 0 0 0 0 9506800 0 0 0 0 0 0 0 0 58404 2595 52481 492976 390925 390925 1 VSSIDLEIDSLSSLLDDMTK Oxidation (M) 2196.0719 0.071910479 2595 Q15942 ZYX Zyxin yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 2 2 1 99.623 94.272 2;3 1.0791E-71 118362 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 143.64 129.91 62249000 26649000 33122000 2478600 0 0 0 0 0 0 0 0 0 0 0 0 58405 2595 52482 492977;492978;492979;492980;492981 390926;390927;390928;390929;390930 390928 4238 4 VSSIDLEIDSLSSLLDDMTK Unmodified 2180.077 0.076995857 2595 Q15942 ZYX Zyxin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.23 0.421 10 3 4 7 2 102.79 97.905 2;3 2.3047E-112 122500 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 234.66 224.87 250800000 165380000 83888000 1532800 0 0 0 0 0 0 0 0 0 0 0 0 58406 2595 52482 492982;492983;492984;492985;492986;492987;492988;492989;492990;492991;492992;492993;492994 390931;390932;390933;390934;390935;390936;390937;390938;390939;390940 390938 8 VSSLQAEPLPR Unmodified 1195.6561 0.65608651 4370 Q9H2M9 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 50.082 49.778 2 1.4476E-05 56251 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 135.71 92.628 298730000 0 42151000 0 13841000 13760000 26844000 18598000 13838000 15156000 22671000 27707000 30292000 18526000 18518000 36828000 58407 4370 52483 492995;492996;492997;492998;492999;493000;493001;493002;493003;493004;493005;493006;493007 390941;390942;390943;390944;390945;390946;390947;390948;390949;390950;390951;390952;390953 390950 13 VSSLQAEPLPRLSVK Unmodified 1622.9356 0.93555583 4370 Q9H2M9 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes yes 0 0 1 By MS/MS 2 0 1 1 78.274 70.144 3 0.0087035 92156 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 35.757 25.56 66239000 66239000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58408 4370 52484 493008 390954 390954 1 VSSPDYPER Unmodified 1048.4825 0.48253882 433 O60825 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.617 23.822 2 0.00052951 25212 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 132.08 80.749 488740000 0 0 0 46742000 48439000 40289000 35043000 37887000 27121000 37421000 48232000 50272000 40815000 26096000 50383000 58409 433 52485 493009;493010;493011;493012;493013;493014;493015;493016;493017;493018;493019;493020 390955;390956;390957;390958;390959;390960;390961;390962;390963;390964;390965 390958 9 VSSPLPSPSAMTDAANSQAAAK Unmodified 2100.0157 0.015733004 3594 Q8WXI9 GATAD2B Transcriptional repressor p66-beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 1 2 2 2 1 2 2 69.315 69.383 2;3 4.3829E-13 79580 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 89.624 75.66 156650000 0 0 0 7090700 8063200 10556000 7859900 10477000 3487700 18371000 18400000 20094000 6672300 14933000 30650000 58410 3594 52486 493021;493022;493023;493024;493025;493026;493027;493028;493029;493030;493031;493032;493033;493034;493035;493036;493037;493038;493039;493040;493041;493042 390966;390967;390968;390969;390970;390971;390972;390973;390974 390972 9 VSSPLSPLSPGIK Unmodified 1280.734 0.73400248 4812 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73.038 72.041 2 0.0032812 83221 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 47.559 24.819 199570000 36121000 55564000 2020100 6897600 6386000 9109800 6304100 7568000 6311500 10763000 9806200 12627000 8338600 8330200 13427000 58411 4812 52487 493043;493044;493045;493046;493047;493048;493049;493050;493051;493052;493053;493054;493055;493056;493057 390975;390976;390977;390978;390979;390980;390981;390982;390983;390984;390985;390986;390987;390988 390985 14 VSSPSPELGTTPASIFR Unmodified 1744.8996 0.89956426 4016 Q99501 GAS2L1 GAS2-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 80.376 80.42 2 0.00024949 93352 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 64.65 51.138 89906000 0 0 0 5056100 6374100 8214500 8943400 8003600 8746300 11415000 8344200 11049000 6186100 7573400 0 58412 4016 52488 493058;493059;493060;493061;493062;493063;493064;493065;493066;493067;493068 390989;390990;390991;390992;390993 390993 5 VSSQFDPNK Unmodified 1020.4876 0.4876242 2062 Q01780 EXOSC10 Exosome component 10 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 22.814 21.069 2 0.00090523 26785 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.47 114.69 55534000 0 43179000 0 0 0 0 0 0 0 0 0 0 0 0 12355000 58413 2062 52489 493069;493070 390994;390995;390996 390995 3 VSSQFDPNKQTPSGKK Unmodified 1746.8901 0.89006221 2062 Q01780 EXOSC10 Exosome component 10 yes yes 0 0 2 By MS/MS 2 0 1 1 37.472 30.974 4 0.041999 42942 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 22.214 9.0954 15114000 15114000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58414 2062 52490 493071 390997 390997 0 VSSQNLVAIPVYVK Unmodified 1515.8661 0.86607929 5117 Q9Y2T2 AP3M1 AP-3 complex subunit mu-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.489 81.55 2 0.00040145 94105 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 84.268 80.251 205930000 0 0 0 8582700 13250000 15081000 13836000 21678000 9591700 22944000 19107000 19505000 14109000 16963000 31283000 58415 5117 52491 493072;493073;493074;493075;493076;493077;493078;493079;493080;493081;493082;493083 390998;390999;391000;391001;391002;391003;391004;391005;391006;391007 391000 10 VSSQSFSEIER Unmodified 1267.6044 0.60444487 3358 Q8N6H7 ARFGAP2 ADP-ribosylation factor GTPase-activating protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.129 45.299 2 8.3336E-11 50969 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 152.28 123.36 652240000 0 0 0 30491000 25422000 52920000 55276000 34461000 32828000 56074000 70554000 71496000 50131000 54006000 118580000 58416 3358 52492 493084;493085;493086;493087;493088;493089;493090;493091;493092;493093;493094;493095 391008;391009;391010;391011;391012;391013;391014;391015;391016;391017 391008 10 VSSQSFSEIERQAQVAEK Unmodified 2022.0018 0.0017974991 3358 Q8N6H7 ARFGAP2 ADP-ribosylation factor GTPase-activating protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.33 0.471 2 1 1 1 1 69.897 64.356 3 0.003482 79800 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 57.52 48.236 48822000 4942100 4745900 39134000 0 0 0 0 0 0 0 0 0 0 0 0 58417 3358 52493 493096;493097;493098 391018;391019 391019 2 VSSSASSSSHHEASTQETSESSR Unmodified 2364.0062 0.0061671881 1759 P55198 MLLT6 Protein AF-17 yes yes 0 0 0 By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 6.1384 6.2763 4 0.0036924 3613 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 26.477 23.379 20157000 0 0 0 0 1287200 1507800 1665900 4643700 1039900 941470 2129200 3214700 0 1517100 2210300 58418 1759 52494 493099;493100;493101;493102;493103;493104;493105;493106;493107;493108 391020;391021 391020 2 VSSSCLDLPDSTEEK Unmodified 1665.7403 0.740346 2810 Q5VT52 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 53.131 53.273 2 3.01E-27 60385 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 164.11 147.73 494700000 0 0 0 41489000 46860000 27371000 53870000 39842000 28051000 42674000 47646000 62278000 13734000 52432000 38450000 58419 2810 52495 493109;493110;493111;493112;493113;493114;493115;493116;493117;493118;493119;493120 391022;391023;391024;391025;391026;391027;391028;391029;391030;391031;391032;391033;391034 391024 13 VSSSGLDSLGR Unmodified 1076.5462 0.54620171 460 O75145 PPFIA3 Liprin-alpha-3 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 39.478 39.839 2 0.015136 44329 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 67.207 31.588 20418000 0 0 0 0 0 0 0 2819800 0 4042100 3850900 0 2110000 1998100 5596700 58420 460 52496 493121;493122;493123;493124;493125;493126 391035;391036 391035 0 VSSTDSDSFVK Unmodified 1170.5404 0.54044763 3494 Q8TCY9 URGCP Up-regulator of cell proliferation yes yes 0 0 0 By MS/MS 2 0 1 1 32.385 27.851 2 0.0049248 36484 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.965 58.319 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58421 3494 52497 493127 391037 391037 1 VSSTTSELTK Unmodified 1051.5397 0.53971935 2446 Q14789 GOLGB1 Golgin subfamily B member 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 17.484 17.607 2 0.034712 17891 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 72.928 53.834 29037000 0 0 0 5534700 4886000 0 0 4490800 0 0 4015600 0 10110000 0 0 58422 2446 52498 493128;493129;493130;493131;493132 391038;391039 391039 0 VSSVALCK Unmodified 862.45824 0.45823833 3946 Q96P70 IPO9 Importin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 24.502 24.8 2 0.020609 25554 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 62.659 24.525 78248000 0 0 0 0 0 12302000 4405300 3270800 4864300 9770200 8345000 12061000 9545000 11884000 1801500 58423 3946 52499 493133;493134;493135;493136;493137;493138;493139;493140;493141;493142 391040;391041;391042 391042 3 VSSVDGVLGGYIQK Unmodified 1420.7562 0.75619449 820 P06400 RB1 Retinoblastoma-associated protein yes yes 0 0 0 By MS/MS 2 0 1 1 79.317 74.582 2 0.0023275 92694 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.306 63.35 95584000 0 95584000 0 0 0 0 0 0 0 0 0 0 0 0 0 58424 820 52500 493143 391043 391043 1 VSSVPNTSQSYAK Unmodified 1366.6729 0.67285879 2473 Q15018 FAM175B BRISC complex subunit Abro1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 28.021 27.415 2 3.5423E-08 33665 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.7 61.499 111940000 5234300 18628000 0 5802700 2975900 6717600 5929000 4971200 0 7966500 10312000 9268900 10244000 7956600 15929000 58425 2473 52501 493144;493145;493146;493147;493148;493149;493150;493151;493152;493153;493154;493155;493156 391044;391045;391046;391047;391048 391044 5 VSSYATLFAQALPR Unmodified 1522.8144 0.81437807 3787 Q96CW5 TUBGCP3 Gamma-tubulin complex component 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 88.303 88.404 2 1.2566E-07 102339 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.855 77.697 3634600 0 0 0 0 0 1129200 0 0 0 0 0 0 0 0 2505400 58426 3787 52502 493157;493158;493159 391049;391050;391051 391051 3 VSTAVLSITAK Unmodified 1088.6441 0.64412484 4011 Q99460 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 4 2 12 3 2 1 1 1 1 1 1 1 1 1 1 1 1 1 62.795 60.861 2 6.9746E-05 69721 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 112.75 82.494 1376500000 358730000 767910000 11482000 11628000 20015000 18315000 7756500 8842400 5896500 38883000 41218000 53085000 7488100 8495300 16730000 58427 4011 52503 493160;493161;493162;493163;493164;493165;493166;493167;493168;493169;493170;493171;493172;493173;493174;493175;493176;493177 391052;391053;391054;391055;391056;391057;391058;391059;391060;391061;391062;391063;391064;391065;391066;391067;391068 391060 16 VSTENGDAPRERGSSLSGTDDGAQEVVK Unmodified 2860.3435 0.34348574 5276 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 yes yes 0 0 2 By MS/MS 2 0 1 1 40.451 36.842 4 0.0012321 46556 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 32.164 25.44 9518000 0 0 9518000 0 0 0 0 0 0 0 0 0 0 0 0 58428 5276 52504 493178 391069 391069 1 VSTETSSPLSPPAVPPPPVPVLPGAVPSQTER Unmodified 3189.6921 0.69214425 2340 Q13671 RIN1 Ras and Rab interactor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 91.211 91.319 3 3.4393E-05 105966 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 29.14 27.122 25026000 0 0 0 0 1729500 2091200 1472100 2299800 1309900 2159600 3345500 4227000 1530200 1748000 3113300 58429 2340 52505 493179;493180;493181;493182;493183;493184;493185;493186;493187;493188;493189 391070;391071;391072;391073;391074;391075;391076;391077 391072 8 VSTEVDAR Unmodified 875.43486 0.43486035 1392 P37837 TALDO1 Transaldolase yes yes 0 0 0 By MS/MS 10 0 1 1 13.611 13.859 2 0.0099634 12107 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 81.191 60.492 45794000 0 0 0 0 0 0 0 0 0 0 0 0 0 45794000 0 58430 1392 52506 493190 391078 391078 1 VSTLAGPSSDDENEEESKPEK Unmodified 2247.0026 0.0026449396 5004 Q9ULT8 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 28.773 29.072 3 3.825E-21 30472 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.48 86.316 87632000 0 0 0 0 0 17091000 5126000 8136300 5250500 0 0 13777000 11350000 12150000 14751000 58431 5004 52507 493191;493192;493193;493194;493195;493196;493197;493198;493199 391079;391080;391081;391082;391083;391084;391085 391082 7 VSTLAGPSSDDENEEESKPEKEDEPQEDAK Unmodified 3288.4277 0.42772846 5004 Q9ULT8 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes yes 0 0 2 By MS/MS By MS/MS 2 0 2 1 1 38.107 32.368 4 2.6754E-11 44542 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.413 53.531 27362000 15131000 12231000 0 0 0 0 0 0 0 0 0 0 0 0 0 58432 5004 52508 493200;493201 391086;391087 391087 2 VSTLPAITLK Unmodified 1041.6434 0.64339656 839 P07339 CTSD Cathepsin D;Cathepsin D light chain;Cathepsin D heavy chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 74.503 73.833 2 0.0026033 84729 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 81.95 49.11 1111800000 0 170210000 3799600 386260000 51319000 45226000 37609000 79554000 28116000 54549000 68876000 64716000 43981000 38135000 39491000 58433 839 52509 493202;493203;493204;493205;493206;493207;493208;493209;493210;493211;493212;493213;493214;493215;493216 391088;391089;391090;391091;391092;391093;391094;391095;391096;391097;391098;391099;391100;391101 391099 14 VSTMPLSTSSHSLQQGQQPTSLHTTVA Unmodified 2822.3869 0.38687088 675 O95628 CNOT4 CCR4-NOT transcription complex subunit 4 yes yes 0 0 0 By MS/MS 2 0 1 1 74.365 66.235 3 0.0033093 87557 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 29.135 22.411 24400000 24400000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58434 675 52510 493217 391102;391103 391102 2 VSTNGSDDPEDAGAGENRR Unmodified 1945.8362 0.83618873 3888 Q96J02 ITCH E3 ubiquitin-protein ligase Itchy homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 15.493 15.696 3 0.0017798 15811 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 34.909 31.006 19229000 0 0 0 0 0 2731800 0 1959300 0 2675800 0 0 0 4486800 7375500 58435 3888 52511 493218;493219;493220;493221;493222 391104;391105;391106 391104 3 VSTPSDYTLSFLK Unmodified 1456.745 0.7449611 133 O00255 MEN1 Menin yes yes 0 0 0 By MS/MS 2 0 1 1 88.255 83.412 2 0.012508 103708 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.951 58.691 16389000 0 16389000 0 0 0 0 0 0 0 0 0 0 0 0 0 58436 133 52512 493223 391107 391107 1 VSTSGSSVDSSK Unmodified 1139.5306 0.53061123 2558 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.0514 7.175 2 0.00035486 4660 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.015 39.583 40636000 0 0 0 2523700 2140900 3725100 3173800 3941900 4454300 3322000 6517400 1767400 3356400 1829000 3883700 58437 2558 52513 493224;493225;493226;493227;493228;493229;493230;493231;493232;493233;493234;493235 391108;391109;391110;391111;391112;391113;391114;391115;391116;391117;391118 391111 11 VSTSNEDFSLK Unmodified 1225.5826 0.5826468 3078 Q7Z333 SETX Probable helicase senataxin yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 47.208 44.524 2 0.0029595 57021 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.2 75.587 24674000 0 21145000 0 0 0 0 0 0 0 0 0 0 3529000 0 0 58438 3078 52514 493236;493237 391119;391120 391119 1 VSTSPVGLPSIDPSGSSPSSSSAPLASFSGIPGTR Unmodified 3285.6365 0.63647987 3250 Q8IWZ3 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 91.47 91.623 3 2.4393E-26 106200 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.442 48.953 19312000 0 0 0 0 0 0 0 1628200 0 5751200 3532600 0 0 1145200 7254900 58439 3250 52515 493238;493239;493240;493241;493242 391121;391122;391123;391124;391125 391122 5 VSTTAPVTLASSK Unmodified 1260.6925 0.6925316 2561 Q15652 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 45.102 45.349 2 0.0074403 49854 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 45.661 24.791 47962000 0 0 0 0 3204800 3616500 5653300 3880100 0 5519500 6073800 6819900 4222200 3920300 5051600 58440 2561 52516 493243;493244;493245;493246;493247;493248;493249;493250;493251;493252 391126;391127;391128;391129;391130 391129 5 VSTTLNVAQAYYAR Unmodified 1555.7995 0.79945628 367 O43795 MYO1B Unconventional myosin-Ib yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 68.975 68.795 2 0.01011 79410 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 40.496 24.907 9364000 0 0 0 0 3868900 0 0 0 0 5495100 0 0 0 0 0 58441 367 52517 493253;493254 391131 391131 1 VSTTTDSPVSPAQAASPFIPLDELSSK Unmodified 2744.3756 0.37562072 3803 Q96E09 FAM122A Protein FAM122A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 91.2 90.668 3 6.7313E-14 105443 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 39.124 35.783 231490000 0 180960000 0 0 2847200 3046400 2240200 2522200 2795100 6060800 5610400 5204800 2267600 4447700 13486000 58442 3803 52518 493255;493256;493257;493258;493259;493260;493261;493262;493263;493264;493265;493266;493267 391132;391133;391134;391135;391136;391137;391138;391139;391140 391137 8 VSTTTGDGVAR Unmodified 1062.5306 0.53055165 3516 Q8TEH3 DENND1A DENN domain-containing protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.546 13.707 2 0.006407 12982 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 56.632 24.505 171140000 0 0 0 9360900 10981000 8897100 10620000 13276000 9290300 17430000 12426000 22025000 19659000 12376000 24802000 58443 3516 52519 493268;493269;493270;493271;493272;493273;493274;493275;493276;493277;493278;493279 391141;391142;391143;391144;391145;391146;391147;391148;391149;391150;391151 391141 10 VSTVAGIGIQGTDK Unmodified 1344.7249 0.72489436 3391 Q8NBF2 NHLRC2 NHL repeat-containing protein 2 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 52.734 52.95 2 0.0097353 59000 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 51.841 30.971 30527000 0 0 0 0 0 0 2129000 0 3298200 0 18353000 0 0 6747100 0 58444 3391 52520 493280;493281;493282;493283 391152 391152 1 VSTVFWK Unmodified 865.46979 0.46978929 2378 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 70.933 63.88 2 0.02866 84561 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.793 77.128 231040000 180110000 50933000 0 0 0 0 0 0 0 0 0 0 0 0 0 58445 2378 52521 493284;493285 391153;391154 391154 2 VSVAAGSEEDHK Unmodified 1227.5731 0.57314474 4303 Q9GZS1 POLR1E DNA-directed RNA polymerase I subunit RPA49 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 30 3 3 2 3 3 3 2 1 2 3 2 3 13.428 13.556 2;3 0.00085814 10532 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 73.499 64.116 205670000 0 0 0 34455000 21972000 10506000 16309000 12263000 12978000 11222000 1833100 15188000 31039000 12920000 24983000 58446 4303 52522 493286;493287;493288;493289;493290;493291;493292;493293;493294;493295;493296;493297;493298;493299;493300;493301;493302;493303;493304;493305;493306;493307;493308;493309;493310;493311;493312;493313;493314;493315 391155;391156;391157;391158;391159;391160;391161;391162;391163;391164;391165;391166;391167;391168;391169 391165 13 VSVADHSLHLSK Unmodified 1291.6884 0.68844927 2245 Q13162 PRDX4 Peroxiredoxin-4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 3 24 1 1 1 2 2 2 2 2 2 2 2 2 2 2 2 37.649 37.227 2;3 1.088E-05 40041 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 91.914 73.169 2535400000 330660000 36695000 26023000 54349000 44882000 95424000 70399000 81406000 65050000 166690000 232440000 500900000 134260000 204880000 491360000 58447 2245 52523 493316;493317;493318;493319;493320;493321;493322;493323;493324;493325;493326;493327;493328;493329;493330;493331;493332;493333;493334;493335;493336;493337;493338;493339;493340;493341;493342 391170;391171;391172;391173;391174;391175;391176;391177;391178;391179;391180;391181;391182;391183;391184;391185;391186;391187;391188;391189 391185 15 VSVDDLCK Unmodified 934.44298 0.44298219 3953 Q96Q15 SMG1 Serine/threonine-protein kinase SMG1 yes yes 0 0 0 By MS/MS 2 0 1 1 41.595 36.499 2 0.032517 47472 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.127 29.68 17416000 0 17416000 0 0 0 0 0 0 0 0 0 0 0 0 0 58448 3953 52524 493343 391190 391190 1 VSVELTNSLFK Unmodified 1235.6762 0.67615325 1010 P14923 JUP Junction plakoglobin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.891 79.934 2 0.00055755 92768 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 81.338 41.336 103640000 0 0 0 3553700 4545000 4472300 4424700 46086000 6886500 5822600 6373000 10839000 7137400 3502000 0 58449 1010 52525 493344;493345;493346;493347;493348;493349;493350;493351;493352;493353;493354 391191;391192;391193;391194;391195;391196;391197;391198;391199;391200 391199 10 VSVENIK Unmodified 787.44397 0.44396847 2875 Q6FI81 CIAPIN1 Anamorsin yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 27.035 27.229 2 0.024035 27978 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.614 37.189 200440000 0 0 0 10125000 11037000 32459000 0 13956000 0 25483000 0 26219000 17361000 22777000 41018000 58450 2875 52526 493355;493356;493357;493358;493359;493360;493361;493362;493363 391201;391202;391203;391204 391202 4 VSVETLEK Unmodified 903.49131 0.49131259 4630 Q9NSV4 DIAPH3 Protein diaphanous homolog 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.698 36.879 2 0.0067966 39491 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 96.492 42.937 666080000 0 0 0 39849000 40085000 53025000 43094000 44424000 41073000 53666000 61427000 117150000 58705000 50130000 63450000 58451 4630 52527 493364;493365;493366;493367;493368;493369;493370;493371;493372;493373;493374;493375 391205;391206;391207;391208;391209;391210;391211;391212;391213 391211 8 VSVEYTEK Unmodified 953.47058 0.47057715 3694 Q92979 EMG1 Ribosomal RNA small subunit methyltransferase NEP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 4 3.46 3 1 1 1 1 1 27.038 23.901 2 0.014574 31033 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.531 62.748 369950000 11861000 347410000 5795700 0 0 0 0 0 0 0 0 0 0 4877700 0 58452 3694 52528 493376;493377;493378;493379 391214;391215;391216 391214 3 VSVFFGGLSIK Unmodified 1152.6543 0.6542956 118 O00148 DDX39A ATP-dependent RNA helicase DDX39A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 87.343 87.489 2 0.0019204 101105 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.1 60.886 39454000 0 0 0 0 0 8052500 1939600 0 2535700 7339700 3464200 3703900 0 0 12418000 58453 118 52529 493380;493381;493382;493383;493384;493385;493386 391217;391218;391219 391219 3 VSVGAPDLSLEASEGSIK Unmodified 1757.9047 0.90470922 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 76.916 76.388 2 1.8982E-58 93536 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 157.5 139.83 700280000 0 294860000 0 7523500 23273000 23686000 30558000 39525000 31146000 33681000 35713000 48470000 36113000 34805000 60926000 58454 2172 52530 493387;493388;493389;493390;493391;493392;493393;493394;493395;493396;493397;493398;493399;493400 391220;391221;391222;391223;391224;391225;391226;391227;391228;391229;391230;391231;391232;391233 391223 14 VSVGEFSAEGEGNSK Unmodified 1495.6791 0.67906638 4647 Q9NUL3 STAU2 Double-stranded RNA-binding protein Staufen homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 46.584 46.834 2 0.0013699 52896 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 62.258 51.039 26919000 0 0 0 0 2061600 2970300 0 0 2726900 0 0 3712400 5888200 5122700 4436600 58455 4647 52531 493401;493402;493403;493404;493405;493406;493407;493408;493409 391234;391235;391236;391237;391238;391239;391240;391241;391242;391243 391234 10 VSVGLLLVK Unmodified 926.61645 0.61645353 3792 Q96DA0 ZG16B Zymogen granule protein 16 homolog B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 80.403 80.449 2 0.024299 93059 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 50.703 32.855 23570000 0 0 0 768920 1280700 2713000 1106900 3196100 995700 2298500 2907100 4811100 2149200 1342500 0 58456 3792 52532 493410;493411;493412;493413;493414;493415;493416;493417;493418;493419;493420 391244;391245;391246;391247 391247 4 VSVGQSCGFSGK Unmodified 1211.5605 0.56047157 457 O75128 COBL Protein cordon-bleu yes yes 0 0 0 By matching By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 31.359 31.633 2 0.0095731 34334 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 47.559 36.408 12544000 0 0 0 0 0 1571300 0 1607600 0 2139700 0 4394400 2831000 0 0 58457 457 52533 493421;493422;493423;493424;493425 391248 391248 1 VSVHVIEGDHR Unmodified 1246.6418 0.64183343 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 2 1 1 1 2 2 2 2 2 2 26.928 27.262 2;3 0.0010688 29267 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 75.294 53.787 872230000 0 0 0 0 0 122030000 24401000 18572000 22837000 81852000 94608000 130600000 66018000 64343000 246970000 58458 1565 52534 493426;493427;493428;493429;493430;493431;493432;493433;493434;493435;493436;493437;493438;493439;493440;493441;493442 391249;391250;391251;391252;391253;391254;391255;391256;391257;391258;391259;391260;391261;391262 391259 9 VSVINTVDTSHEDMIHDAQMDYYGTR Acetyl (Protein N-term);2 Oxidation (M) 3070.3284 0.3284293 1769 P55735 SEC13 Protein SEC13 homolog yes yes 1 2 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 78.267 78.421 3 6.8555E-35 90180 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.903 94.271 72213000 0 0 0 0 0 0 0 0 0 13150000 10967000 10469000 4641800 5570400 27415000 58459 1769 52535 493443;493444;493445;493446;493447;493448 391263;391264;391265;391266;391267 391265 2885;2886 5 VSVIQDFVK Unmodified 1033.5808 0.5807963 4878 Q9UFW8 CGGBP1 CGG triplet repeat-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 3 6 1 1 1 1 1 1 1 1 1 76.783 75.121 2 0.00036053 94533 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.41 49.638 191300000 6777900 111740000 20515000 4281400 0 0 5851400 0 0 8850100 8873200 10455000 0 0 13953000 58460 4878 52536 493449;493450;493451;493452;493453;493454;493455;493456;493457 391268;391269;391270;391271;391272;391273;391274 391269 7 VSVNGETVHREEEK Unmodified 1611.7853 0.78526278 5054 Q9UPQ0 LIMCH1 LIM and calponin homology domains-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.26 3.3 5 18 1 1 3 2 2 1 1 2 2 1 1 2 1 2 1 17.73 17.121 2;3;4 0.00024402 17203 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 75.462 57.36 390490000 5826300 9607300 80034000 16152000 20534000 17876000 12557000 26815000 21063000 14708000 15243000 67355000 17743000 42875000 22101000 58461 5054 52537 493458;493459;493460;493461;493462;493463;493464;493465;493466;493467;493468;493469;493470;493471;493472;493473;493474;493475;493476;493477;493478;493479;493480 391275;391276;391277;391278;391279;391280;391281;391282;391283;391284;391285;391286;391287;391288;391289;391290;391291;391292;391293;391294 391291 13 VSVPDEMSADLEK Unmodified 1418.6599 0.65991084 4778 Q9NZN5 ARHGEF12 Rho guanine nucleotide exchange factor 12 yes yes 0 0 0 By MS/MS 2 0 1 1 69.925 64.056 2 0.0040484 81529 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.488 57.677 29723000 0 29723000 0 0 0 0 0 0 0 0 0 0 0 0 0 58462 4778 52538 493481 391295 391295 1 VSVPSTVISR Unmodified 1043.5975 0.597509 472 O75179 ANKRD17 Ankyrin repeat domain-containing protein 17 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.421 52.564 2 0.016645 60203 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 49.418 23.479 238960000 0 0 0 12144000 11365000 14299000 17493000 16830000 13505000 22779000 30972000 29299000 17696000 21897000 30678000 58463 472 52539 493482;493483;493484;493485;493486;493487;493488;493489;493490;493491;493492;493493 391296;391297;391298 391298 2 VSVQNGSIHQK Unmodified 1195.6309 0.63093439 3120 Q7Z739 YTHDF3 YTH domain-containing family protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.22 6 1 26 2 3 2 2 2 2 2 2 2 2 3 2 2 2 3 14.299 13.733 2;3 4.5512E-16 12805 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 168.25 138.18 1479000000 263840000 75983000 41055000 48430000 41687000 44578000 79394000 65191000 56611000 114600000 113630000 103650000 106450000 102270000 221650000 58464 3120 52540 493494;493495;493496;493497;493498;493499;493500;493501;493502;493503;493504;493505;493506;493507;493508;493509;493510;493511;493512;493513;493514;493515;493516;493517;493518;493519;493520;493521;493522;493523;493524;493525;493526 391299;391300;391301;391302;391303;391304;391305;391306;391307;391308;391309;391310;391311;391312;391313;391314;391315;391316;391317;391318;391319;391320;391321;391322 391312 17 VSVRIPPDSEK Unmodified 1225.6667 0.6666512 2033 Q00341 HDLBP Vigilin yes yes 0 0 1 By MS/MS By MS/MS 2 0 6 4 2 44.122 38.4 3 0.0021815 52890 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.124 41.613 160930000 136220000 0 24703000 0 0 0 0 0 0 0 0 0 0 0 0 58465 2033 52541 493527;493528;493529;493530;493531;493532 391323;391324;391325;391326;391327;391328;391329;391330;391331;391332;391333;391334 391326 10 VSVSATPGHTK Unmodified 1082.572 0.57202253 4317 Q9H089 LSG1 Large subunit GTPase 1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 16.04 12.661 2 3.6107E-09 18513 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 138.08 113.16 89100000 47933000 33309000 7858400 0 0 0 0 0 0 0 0 0 0 0 0 58466 4317 52542 493533;493534;493535;493536 391335;391336;391337;391338;391339 391337 5 VSVSPVVHVR Unmodified 1077.6295 0.62947783 3567 Q8WVV9 HNRNPLL Heterogeneous nuclear ribonucleoprotein L-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 41.708 41.889 2 0.0087229 47037 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 59.35 43.969 40153000 0 0 0 0 3103800 2983300 4224400 3368800 3305900 5899200 5975600 7028600 4263700 0 0 58467 3567 52543 493537;493538;493539;493540;493541;493542;493543;493544;493545 391340;391341;391342;391343 391340 4 VSVTPPEESQNSDTPPRPDRLPLDEK Unmodified 2902.4308 0.43084419 2113 Q05209 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 yes yes 0 0 2 By MS/MS 2 0 1 1 67.786 64.063 4 0.018626 79862 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 21.349 18.362 19119000 0 0 19119000 0 0 0 0 0 0 0 0 0 0 0 0 58468 2113 52544 493546 391344;391345 391345 2 VSVTTNTTDSVSDEEK Unmodified 1710.7796 0.77956828 4584 Q9NR09 BIRC6 Baculoviral IAP repeat-containing protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 33.688 33.862 2 1.32E-19 36224 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 134.08 122.02 35250000 0 0 0 0 2194900 3462000 2049400 3414700 1406800 3273600 9886600 0 0 4200900 5361600 58469 4584 52545 493547;493548;493549;493550;493551;493552;493553;493554;493555 391346;391347;391348;391349;391350;391351;391352;391353 391349 8 VSVYAVPDK Unmodified 976.52295 0.52294707 4757 Q9NZ08 ERAP1 Endoplasmic reticulum aminopeptidase 1 yes yes 0 0 0 By MS/MS 2 0 1 1 47.102 41.539 2 0.032262 54163 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.177 63.974 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58470 4757 52546 493556 391354 391354 1 VSWQDLK Unmodified 874.45487 0.45486751 2259 Q13243 SRSF5 Serine/arginine-rich splicing factor 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 53.317 53.624 2 0.031266 59483 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.975 38.774 67912000 0 0 0 0 0 0 11195000 9877800 0 0 17756000 0 0 11295000 17788000 58471 2259 52547 493557;493558;493559;493560;493561 391355 391355 1 VSWSPAEDHNAPIEK Unmodified 1678.7951 0.79509919 1315 P32004 L1CAM Neural cell adhesion molecule L1 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.455 48.616 3 0.0043824 54323 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 27.488 13.233 94790000 0 0 0 6425000 5851200 5328300 4636800 6614700 4597600 7973200 10610000 10534000 9131200 7912600 15175000 58472 1315 52548 493562;493563;493564;493565;493566;493567;493568;493569;493570;493571;493572;493573 391356;391357;391358;391359 391359 4 VSYARPSSEVIK Unmodified 1334.7194 0.71941505 2566 Q15717 ELAVL1 ELAV-like protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.72 2 13 1 1 1 1 1 1 1 1 1 1 1 1 2 1 36.278 35.755 3 0.010924 49987 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.252 30.335 1189200000 523640000 0 35243000 27099000 25714000 42592000 41236000 36696000 26837000 47755000 55500000 54797000 59982000 102600000 109470000 58473 2566 52549 493574;493575;493576;493577;493578;493579;493580;493581;493582;493583;493584;493585;493586;493587;493588 391360;391361;391362;391363;391364;391365 391361 5 VSYDEWNRK Unmodified 1195.5622 0.56218613 1355 P35573 AGL Glycogen debranching enzyme;4-alpha-glucanotransferase;Amylo-alpha-1,6-glucosidase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 38.836 33.807 3 0.0065 42375 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 76.827 43.564 60177000 16686000 17491000 26000000 0 0 0 0 0 0 0 0 0 0 0 0 58474 1355 52550 493589;493590;493591 391366 391366 1 VSYDMDGFCER Unmodified 1377.5329 0.53293619 2215 Q12965 MYO1E Unconventional myosin-Ie yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 59.214 59.216 2 0.020343 67437 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 42.743 38.445 22476000 0 0 0 2167900 1556500 0 2265100 2566800 0 2321700 0 0 0 3347400 8250700 58475 2215 52551 493592;493593;493594;493595;493596;493597;493598 391367;391368;391369 391367 3 VSYFEIYLDK Unmodified 1275.6387 0.63870511 1328 P33176;O60282;Q12840 KIF5B;KIF5C;KIF5A Kinesin-1 heavy chain;Kinesin heavy chain isoform 5C;Kinesin heavy chain isoform 5A yes no 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 89.141 82.64 2 0.0096482 105633 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 113.22 95.355 27296000 20018000 7278700 0 0 0 0 0 0 0 0 0 0 0 0 0 58476 1328 52552 493599;493600 391370;391371 391371 1 VSYFPTVPGVYIVSTK Unmodified 1755.9447 0.94472354 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.64 2.9 1 1 9 2 1 1 1 1 1 1 1 1 1 90.838 90.212 2 0.0015982 104741 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 63.727 58.343 61914000 0 21966000 0 0 0 2971600 0 1771200 1460100 3919900 3703600 4635200 772300 2541400 18173000 58477 487 52553 493601;493602;493603;493604;493605;493606;493607;493608;493609;493610;493611 391372;391373;391374;391375;391376 391372 5 VSYGIGDEEHDQEGR Unmodified 1689.7231 0.72305646 1222 P27695 APEX1 DNA-(apurinic or apyrimidinic site) lyase;DNA-(apurinic or apyrimidinic site) lyase, mitochondrial yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 32.128 32.454 3 0.0002068 34310 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.436 62.335 65981000 0 0 0 0 1565200 0 0 2547100 0 0 11321000 7571400 6177200 7290200 29509000 58478 1222 52554 493612;493613;493614;493615;493616;493617;493618 391377;391378;391379;391380 391377 4 VSYIPDEQIAQGPENGRR Unmodified 2028.0025 0.0024662011 4768 Q9NZI8 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 yes yes 0 0 1 By MS/MS 10 0 1 1 57.599 58.201 3 0.0029142 65486 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.181 26.971 6580800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6580800 58479 4768 52555 493619 391381 391381 1 VSYLTLVTDK Unmodified 1137.6281 0.62814043 4354 Q9H1Y0 ATG5 Autophagy protein 5 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 75.544 75.636 2 0.0023307 87274 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 100.25 76.389 58339000 0 0 0 3858800 0 5455000 4063400 3242200 0 8155500 8563000 7493900 4049100 4734000 8724000 58480 4354 52556 493620;493621;493622;493623;493624;493625;493626;493627;493628;493629 391382;391383;391384;391385;391386;391387;391388;391389 391383 8 VSYRASQPDLVDTPTSSKPQPK Unmodified 2400.2285 0.22850297 1492 P46013 MKI67 Antigen KI-67 yes yes 0 0 2 By MS/MS 2 0 1 1 52.817 44.802 4 0.0026642 61610 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 20.678 16.373 25305000 25305000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58481 1492 52557 493630 391390 391390 1 VSYSHIQSK Unmodified 1047.5349 0.53490874 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14.232 13.687 2 0.0018528 19317 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 118.32 80.191 669390000 349670000 96980000 120280000 4572800 4766900 4128500 5887800 3990300 5551300 8698600 8739300 15593000 13782000 8904900 17850000 58482 1226 52558 493631;493632;493633;493634;493635;493636;493637;493638;493639;493640;493641;493642;493643;493644;493645 391391;391392;391393;391394;391395;391396;391397;391398;391399;391400;391401;391402;391403 391396 13 VSYVQLK Unmodified 835.48035 0.48035398 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 40.807 40.915 2 0.023412 45318 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 86.512 43.446 332230000 0 0 0 62296000 36800000 35504000 0 48456000 19453000 28455000 35607000 0 0 29505000 36155000 58483 1029 52559 493646;493647;493648;493649;493650;493651;493652;493653;493654 391404;391405;391406;391407;391408 391406 5 VSYVSGSSLLTTHPQPMDQASLK Unmodified 2445.221 0.22097475 4662 Q9NV88 INTS9 Integrator complex subunit 9 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 80.535 75.133 3 0.00010844 96055 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.04 58.354 72061000 36623000 35438000 0 0 0 0 0 0 0 0 0 0 0 0 0 58484 4662 52560 493655;493656;493657 391409;391410 391410 2 VSYVSGSSLLTTHPQPMDQASLK Oxidation (M) 2461.2159 0.21588937 4662 Q9NV88 INTS9 Integrator complex subunit 9 yes yes 0 1 0 By MS/MS 2 0 1 1 77.049 68.918 3 0.0003617 90764 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.055 45.948 12222000 12222000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58485 4662 52560 493658 391411 391411 6076 1 VSYYENVIK Unmodified 1113.5706 0.57062555 1740 P54577 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 54.152 54.289 2 0.011592 61178 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 62.582 37.763 138360000 0 0 0 9424200 7232800 7865800 8678300 11794000 3711900 9485800 10982000 10722000 5614500 15034000 37813000 58486 1740 52561 493659;493660;493661;493662;493663;493664;493665;493666;493667;493668;493669;493670 391412;391413;391414;391415;391416;391417;391418;391419;391420;391421 391416 10 VTAAAMAGNK Oxidation (M) 948.46987 0.46986564 965 P12270 TPR Nucleoprotein TPR yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6.463 6.0873 2 0.00033492 4204 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 125.5 86.706 407290000 20377000 181420000 0 8309400 10336000 11510000 15990000 8226800 12561000 21260000 26398000 25279000 20499000 20020000 25096000 58487 965 52562 493671;493672;493673;493674;493675;493676;493677;493678;493679;493680;493681;493682;493683;493684 391422;391423;391424;391425;391426;391427;391428;391429;391430;391431;391432;391433;391434 391427 1275 11 VTAAAMAGNK Unmodified 932.47495 0.47495102 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 16.529 16.024 2 1.2239E-09 15842 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 143.89 103.78 796950000 0 420530000 2757500 14994000 11670000 15472000 19984000 14872000 15692000 29771000 42627000 49778000 49033000 39720000 70045000 58488 965 52562 493685;493686;493687;493688;493689;493690;493691;493692;493693;493694;493695;493696;493697;493698;493699 391435;391436;391437;391438;391439;391440;391441;391442;391443;391444;391445;391446;391447;391448;391449;391450;391451;391452;391453 391450 18 VTAAPQSVCALR Unmodified 1271.6656 0.66560534 740 P01023 A2M Alpha-2-macroglobulin yes yes 0 0 0 By MS/MS 10 0 1 1 47.216 46.627 2 0.0056508 53127 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 53.597 22.175 3695800 0 0 0 3695800 0 0 0 0 0 0 0 0 0 0 0 58489 740 52563 493700 391454 391454 1 VTADVINAAEK Unmodified 1129.5979 0.59790293 304 O43175 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.84 1 5 2 13 4 3 1 1 2 1 1 1 1 1 1 1 1 2 45.911 44.576 2 1.7067E-09 53728 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 144.65 91.934 9420100000 258120000 4202800000 25522000 265220000 212660000 530490000 343870000 270660000 267960000 618190000 568550000 513810000 0 441570000 900630000 58490 304 52564 493701;493702;493703;493704;493705;493706;493707;493708;493709;493710;493711;493712;493713;493714;493715;493716;493717;493718;493719;493720;493721 391455;391456;391457;391458;391459;391460;391461;391462;391463;391464;391465;391466;391467;391468;391469;391470;391471;391472;391473;391474;391475;391476;391477;391478;391479;391480;391481;391482;391483;391484;391485;391486;391487;391488;391489;391490;391491;391492 391478 37 VTADVTSAVMGNPVTR Oxidation (M) 1632.8141 0.81412007 2932 Q6P3W7 SCYL2 SCY1-like protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.713 55.838 2 6.2541E-28 63315 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 134.99 120.83 247010000 0 0 0 12996000 12721000 17557000 22990000 19933000 15831000 21621000 22561000 32182000 21670000 18264000 28685000 58491 2932 52565 493722;493723;493724;493725;493726;493727;493728;493729;493730;493731;493732;493733 391493;391494;391495;391496;391497;391498;391499;391500;391501;391502;391503;391504 391499 4569 12 VTADVTSAVMGNPVTR Unmodified 1616.8192 0.81920545 2932 Q6P3W7 SCYL2 SCY1-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 67.571 67.644 2 5.5848E-42 77679 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 161.48 141.82 135780000 0 0 0 5485000 6615300 10277000 10653000 0 10286000 10960000 14856000 15177000 12330000 14542000 24599000 58492 2932 52565 493734;493735;493736;493737;493738;493739;493740;493741;493742;493743;493744 391505;391506;391507;391508;391509;391510;391511;391512;391513;391514;391515;391516 391510 10 VTAEADSSSPTGILATSESK Unmodified 1949.9429 0.94294522 6 A0MZ66 KIAA1598 Shootin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.38 1 1 2 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 58.074 57.111 2 1.05E-127 71337 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 201.72 184.56 248840000 241810 81519000 0 6106000 6059700 15053000 8918800 8373800 8804400 12532000 18481000 20451000 12333000 14792000 35177000 58493 6 52566 493745;493746;493747;493748;493749;493750;493751;493752;493753;493754;493755;493756;493757;493758;493759;493760 391517;391518;391519;391520;391521;391522;391523;391524;391525;391526;391527;391528;391529;391530 391520 14 VTAEEFK Unmodified 822.41233 0.41233399 640 O95302;Q75LS8 FKBP9;FKBP9P1 Peptidyl-prolyl cis-trans isomerase FKBP9;Putative FK506-binding protein 9-like protein yes no 0 0 0 By MS/MS 3 0 1 1 27.63 23.345 2 0.040529 29218 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 80.462 20.104 10083000 0 10083000 0 0 0 0 0 0 0 0 0 0 0 0 0 58494 640 52567 493761 391531 391531 1 VTAEVVLAHLGGGSTSR Unmodified 1652.8846 0.8845829 788 P04843 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 73.663 73.726 3 0.00012958 84916 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 67.605 40.894 104260000 0 0 0 5260600 6600000 14575000 17703000 4874000 8865500 0 6287700 14853000 5576700 7153900 12512000 58495 788 52568 493762;493763;493764;493765;493766;493767;493768;493769;493770;493771;493772 391532;391533;391534;391535;391536;391537;391538;391539;391540;391541;391542 391533 8 VTAIHIDPATHR Unmodified 1329.7153 0.71533272 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 35.779 35.96 2;3 0.00030602 39213 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 82.417 56.033 929420000 0 0 0 38397000 23944000 133410000 52758000 47814000 32139000 72571000 78703000 105800000 68237000 96667000 178980000 58496 1565 52569 493773;493774;493775;493776;493777;493778;493779;493780;493781;493782;493783;493784;493785;493786;493787;493788;493789;493790;493791;493792;493793;493794;493795;493796 391543;391544;391545;391546;391547;391548;391549;391550;391551;391552;391553;391554;391555;391556 391549 9 VTALQEECR Unmodified 1104.5234 0.52335778 3242 Q8IWJ2 GCC2 GRIP and coiled-coil domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 22.508 23.16 2 0.005128 23344 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.75 66.548 7907100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7907100 58497 3242 52570 493797;493798 391557;391558 391557 2 VTAMQLYECQLIDK Oxidation (M) 1726.827 0.82699294 1029 P15924 DSP Desmoplakin yes yes 0 1 0 By MS/MS 10 0 1 1 74.033 73.485 2 0.026703 85235 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 44.543 28.289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58498 1029 52571 493799 391559 391559 1 VTAPDVDLHLK Unmodified 1206.6608 0.66083754 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.61 2.99 4 1 23 2 2 1 2 2 2 2 1 2 2 2 2 2 2 2 62.093 61.365 2;3 0.001542 79810 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 63.408 50.453 907140000 19260000 229130000 24563000 29185000 29505000 36938000 41837000 57442000 42500000 45715000 52132000 82401000 57613000 64360000 94562000 58499 2172 52572 493800;493801;493802;493803;493804;493805;493806;493807;493808;493809;493810;493811;493812;493813;493814;493815;493816;493817;493818;493819;493820;493821;493822;493823;493824;493825;493826;493827 391560;391561;391562;391563;391564;391565;391566;391567;391568;391569;391570;391571;391572;391573;391574;391575;391576;391577;391578;391579;391580;391581;391582 391563 21 VTAQDVRK Unmodified 915.51378 0.51377937 1198 P26038 MSN Moesin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 8.8186 5.6638 2 0.016562 8303 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.13 27.866 1005700000 157520000 639160000 209050000 0 0 0 0 0 0 0 0 0 0 0 0 58500 1198 52573 493828;493829;493830;493831 391583;391584;391585;391586 391583 1 VTAQGPGLEPSGNIANK Unmodified 1651.8529 0.85294842 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.13 3.47 2 5 24 3 3 1 2 2 2 2 2 2 2 2 2 2 2 2 48.979 48.102 2;3 4.6835E-53 93115 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 224.25 195.52 3756600000 87708000 2199200000 3438800 78890000 73511000 98398000 100740000 72079000 71766000 111660000 182050000 160100000 106920000 140720000 269430000 58501 1124 52574 493832;493833;493834;493835;493836;493837;493838;493839;493840;493841;493842;493843;493844;493845;493846;493847;493848;493849;493850;493851;493852;493853;493854;493855;493856;493857;493858;493859;493860;493861;493862 391587;391588;391589;391590;391591;391592;391593;391594;391595;391596;391597;391598;391599;391600;391601;391602;391603;391604;391605;391606;391607;391608;391609 391596 21 VTARPSQPPLPR Unmodified 1317.7517 0.75171823 5007 Q9ULV3 CIZ1 Cip1-interacting zinc finger protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.86 36.042 3 0.0037253 39621 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 53.967 37.829 112560000 0 0 0 5962900 5268400 6930300 6765000 10264000 5932400 9394300 13426000 13034000 9925200 10085000 15577000 58502 5007 52575 493863;493864;493865;493866;493867;493868;493869;493870;493871;493872;493873;493874 391610;391611;391612;391613;391614;391615;391616;391617;391618;391619;391620;391621 391611 11 VTASAPGPAAPDPPGTGASGATVVSGSASGPAAPGK Unmodified 3014.4945 0.49450708 2545 Q15542 TAF5 Transcription initiation factor TFIID subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 63.658 63.792 3 1.9456E-15 73030 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 42.904 31.98 43129000 0 0 0 0 3837100 0 5386200 0 2874100 7368700 6671600 5616900 5277400 6097200 0 58503 2545 52576 493875;493876;493877;493878;493879;493880;493881;493882 391622;391623;391624;391625;391626;391627;391628;391629;391630 391628 9 VTASLLGAPSK Unmodified 1042.6023 0.60226003 5247 Q9Y5S2 CDC42BPB Serine/threonine-protein kinase MRCK beta yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching 10 0 5 1 1 1 1 1 48.756 48.741 2 0.0061921 54841 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 57.174 23.085 27489000 0 0 0 5515300 0 0 0 6680500 0 7267300 0 0 0 8025600 0 58504 5247 52577 493883;493884;493885;493886;493887 391631;391632;391633 391631 3 VTATDLDEPDTLHTR Unmodified 1682.8111 0.81114318 2160 Q08554 DSC1 Desmocollin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 47.415 47.554 2;3 3.3604E-87 54060 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 231.7 207.85 3282100000 0 0 0 562460000 205180000 202160000 155630000 638000000 116830000 272600000 285570000 476910000 228910000 117940000 19937000 58505 2160 52578 493888;493889;493890;493891;493892;493893;493894;493895;493896;493897;493898;493899;493900;493901;493902;493903;493904;493905;493906;493907;493908;493909;493910;493911 391634;391635;391636;391637;391638;391639;391640;391641;391642;391643;391644;391645;391646;391647;391648;391649;391650;391651 391651 13 VTATDLDEPDTLHTRLK Unmodified 1923.9902 0.99017018 2160 Q08554 DSC1 Desmocollin-1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 60.798 54.763 4 0.030449 68456 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 43.37 32.255 24498000 9715700 0 14782000 0 0 0 0 0 0 0 0 0 0 0 0 58506 2160 52579 493912;493913 391652 391652 0 VTAVALTDSVHNVWHQEAGK Unmodified 2161.0916 0.091615559 3543 Q8WUF8 FAM172A Protein FAM172A yes yes 0 0 0 By MS/MS 2 0 1 1 80.003 71.873 4 0.0010582 94445 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 44.595 38.989 6139400 6139400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58507 3543 52580 493914 391653 391653 1 VTAVIPCFPYAR Unmodified 1392.7224 0.72239194 1818;957 P60891;P11908 PRPS1;PRPS2 Ribose-phosphate pyrophosphokinase 1;Ribose-phosphate pyrophosphokinase 2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 82.385 82.435 2 1.4151E-05 94606 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 130.75 96.215 110030000 0 0 0 2859800 3813100 8987700 5920000 10467000 0 9574800 9502900 13503000 8298300 11971000 25138000 58508 1818;957 52581 493915;493916;493917;493918;493919;493920;493921;493922;493923;493924;493925 391654;391655;391656;391657;391658;391659;391660;391661;391662;391663;391664 391660 11 VTAVPTLLK Unmodified 940.59572 0.59571809 4106 Q9BRA2 TXNDC17 Thioredoxin domain-containing protein 17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.39 3.7 5 1 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 67.555 65.614 1;2 0.0051731 87685 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 111.17 66.72 4791000000 1816000000 2475900000 101650000 6462600 8381600 7916000 5838700 5777600 3025400 4634000 66128000 52387000 6817300 42564000 187630000 58509 4106 52582 493926;493927;493928;493929;493930;493931;493932;493933;493934;493935;493936;493937;493938;493939;493940;493941;493942;493943 391665;391666;391667;391668;391669;391670;391671;391672;391673;391674;391675;391676;391677;391678;391679;391680;391681 391673 14 VTAYDLLSNR Unmodified 1150.5982 0.59823728 1738 P54277 PMS1 PMS1 protein homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.672 69.747 2 0.0064586 79500 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.841 43.144 54665000 0 0 0 2087500 3415000 4167700 4404500 4191900 2887000 5636300 5603500 5631400 4847100 4502900 7290400 58510 1738 52583 493944;493945;493946;493947;493948;493949;493950;493951;493952;493953;493954;493955 391682;391683;391684;391685;391686;391687;391688;391689;391690;391691 391685 9 VTAYTVDVTGR Unmodified 1180.6088 0.60880197 2172 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 48.11 48.221 2 0.0004059 53999 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 117.7 83.492 220160000 0 0 0 13884000 12683000 17304000 15075000 21666000 15473000 24356000 22054000 34798000 23720000 19145000 0 58511 2172 52584 493956;493957;493958;493959;493960;493961;493962;493963;493964;493965;493966 391692;391693;391694;391695;391696;391697;391698;391699;391700;391701;391702 391700 9 VTCIDPNPNFEK Unmodified 1432.6657 0.66566492 4450 Q9H8H3 METTL7A Methyltransferase-like protein 7A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 51.735 51.589 2 0.00038013 58329 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 81.017 63.581 49507000 0 0 0 7010200 11828000 0 8519100 12991000 0 0 0 0 0 9158100 0 58512 4450 52585 493967;493968;493969;493970;493971 391703;391704;391705;391706;391707 391704 5 VTCLPWNDEPLAAETSLLK Unmodified 2156.0824 0.082356006 1470 P42898 MTHFR Methylenetetrahydrofolate reductase yes yes 0 0 0 By MS/MS 2 0 1 1 97.007 92.234 2 0.00017977 114162 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.063 78.659 12621000 0 12621000 0 0 0 0 0 0 0 0 0 0 0 0 0 58513 1470 52586 493972 391708 391708 0 VTCPNHPDAILVEDYR Unmodified 1897.8992 0.89924668 2034 Q00403 GTF2B Transcription initiation factor IIB yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 62.854 63.081 3 0.00042974 72215 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 48.053 42.043 48380000 0 0 0 0 0 6166200 6226700 3450500 0 0 9218500 0 8219200 5812600 9286500 58514 2034 52587 493973;493974;493975;493976;493977;493978;493979 391709;391710;391711;391712;391713;391714 391712 6 VTCTVCTPDGSEVDVDVVENEDGTFDIFYTAPQPGK Unmodified 3960.7557 0.75574466 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS 2.57 0.495 3 4 4 3 95.977 91.034 3;4 2.675E-133 114109 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 138.7 136.85 127660000 75929000 51730000 0 0 0 0 0 0 0 0 0 0 0 0 0 58515 1124 52588 493980;493981;493982;493983;493984;493985;493986 391715;391716;391717;391718;391719;391720 391718 6 VTCTVLTPDGTEAEADVIENEDGTYDIFYTAAK Unmodified 3607.64 0.63996984 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS 2.4 0.49 3 2 3 2 94.439 88.864 3 1.8137E-118 112211 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.4 133.73 66231000 37369000 28862000 0 0 0 0 0 0 0 0 0 0 0 0 0 58516 487 52589 493987;493988;493989;493990;493991 391721;391722;391723;391724;391725 391721 5 VTDAIVLLDREQGGK Unmodified 1612.8784 0.87843489 936 P11172 UMPS Uridine 5'-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5'-phosphate decarboxylase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.77 2 3 25 2 2 1 2 2 2 2 2 2 2 3 2 2 2 2 68.165 67.459 2;3 3.0906E-08 76293 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 104.24 87.612 747170000 38482000 40426000 143260000 21689000 17701000 52617000 29108000 25623000 29920000 56586000 80402000 59944000 34162000 33308000 83948000 58517 936 52590 493992;493993;493994;493995;493996;493997;493998;493999;494000;494001;494002;494003;494004;494005;494006;494007;494008;494009;494010;494011;494012;494013;494014;494015;494016;494017;494018;494019;494020;494021 391726;391727;391728;391729;391730;391731;391732;391733;391734;391735;391736;391737;391738;391739;391740;391741;391742;391743 391730 17 VTDALNATR Unmodified 959.50361 0.50360861 930 P10809 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 22.703 22.896 2 0.0095862 23517 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 106.6 26.37 290090000 0 0 0 19742000 15256000 18477000 22803000 17286000 14451000 30670000 34300000 58782000 0 28173000 30150000 58518 930 52591 494022;494023;494024;494025;494026;494027;494028;494029;494030;494031;494032 391744;391745;391746 391745 0 VTDAPTYTTR Unmodified 1123.551 0.55095274 4733 Q9NXV6 CDKN2AIP CDKN2A-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 24.163 24.472 2 0.0016946 25840 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 94.692 63.618 35988000 0 0 0 0 4700100 0 0 3104300 0 4577200 4556300 4776100 5281000 0 8993100 58519 4733 52592 494033;494034;494035;494036;494037;494038;494039;494040;494041;494042 391747;391748;391749;391750;391751;391752;391753;391754;391755;391756;391757;391758 391747 12 VTDAPTYTTRDELVAK Unmodified 1778.905 0.90504357 4733 Q9NXV6 CDKN2AIP CDKN2A-interacting protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.65 2.94 3 1 19 1 2 1 2 1 1 2 1 1 2 2 2 1 2 2 46.951 46.134 2;3 7.8742E-28 51764 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 119.56 88.168 622260000 8549200 129520000 7123200 23988000 27361000 29474000 45077000 40383000 27958000 50438000 50130000 55289000 31123000 34974000 60863000 58520 4733 52593 494043;494044;494045;494046;494047;494048;494049;494050;494051;494052;494053;494054;494055;494056;494057;494058;494059;494060;494061;494062;494063;494064;494065 391759;391760;391761;391762;391763;391764;391765;391766;391767;391768;391769;391770;391771;391772;391773;391774;391775;391776 391769 15 VTDDLVCLVYK Unmodified 1323.6744 0.67443869 1576 P49458 SRP9 Signal recognition particle 9 kDa protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81.641 80.665 2 3.7662E-07 101624 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 145.17 114.92 1011000000 27223000 719500000 18351000 5136900 9817300 11886000 9668300 11180000 15396000 18978000 29914000 35523000 20364000 30706000 47308000 58521 1576 52594 494066;494067;494068;494069;494070;494071;494072;494073;494074;494075;494076;494077;494078;494079;494080 391777;391778;391779;391780;391781;391782;391783;391784;391785;391786;391787;391788;391789;391790;391791 391783 14 VTDDMYAEQTENPENPLRCPIK Unmodified 2619.1945 0.19450201 2656 Q2TAL8 QRICH1 Glutamine-rich protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 74.119 68.964 3 4.2072E-106 86715 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 177.61 170.08 35931000 0 35931000 0 0 0 0 0 0 0 0 0 0 0 0 0 58522 2656 52595 494081 391792;391793 391793 2 VTDEEDESLLLPK Unmodified 1486.7403 0.74026965 5306 yes no 0 0 0 By MS/MS 2 0 2 2 62.745 56.852 2 0.0021033 72918 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.645 50.885 + 89684000 0 89684000 0 0 0 0 0 0 0 0 0 0 0 0 0 58523 5306 52596 494082;494083 391794 391794 1 VTDERNGREASDNLAVQNLK Unmodified 2228.1145 0.11453585 4821 Q9P2K8 EIF2AK4 Eukaryotic translation initiation factor 2-alpha kinase 4 yes yes 0 0 2 By MS/MS 2 0 1 1 43.375 39.653 4 0.00011129 50056 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 41.513 36.803 6143800 0 0 6143800 0 0 0 0 0 0 0 0 0 0 0 0 58524 4821 52597 494084 391795 391795 1 VTDETSGCSLTCAQFHPDGLIFGTGTMDSQIK Unmodified 3472.5585 0.55850559 5017 Q9UMS4 PRPF19 Pre-mRNA-processing factor 19 yes yes 0 0 0 By matching By MS/MS By MS/MS 2.2 0.4 4 1 1 3 1 92.245 87.524 3 3.9869E-135 108392 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 151.99 147.7 183140000 13363000 157330000 12441000 0 0 0 0 0 0 0 0 0 0 0 0 58525 5017 52598 494085;494086;494087;494088;494089 391796;391797;391798;391799;391800 391796 5 VTDISGGCGAMYEIK Oxidation (M) 1615.7222 0.72219352 2707 Q53S33 BOLA3 BolA-like protein 3 yes yes 0 1 0 By MS/MS 2 0 1 1 55.095 49.289 2 0.00017901 63716 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.477 85.524 13913000 0 13913000 0 0 0 0 0 0 0 0 0 0 0 0 0 58526 2707 52599 494090 391801 391801 4362 1 VTDISGGCGAMYEIK Unmodified 1599.7273 0.7272789 2707 Q53S33 BOLA3 BolA-like protein 3 yes yes 0 0 0 By MS/MS 2 0 1 1 66.759 60.842 2 0.0037523 77979 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 59.84 44.268 42600000 0 42600000 0 0 0 0 0 0 0 0 0 0 0 0 0 58527 2707 52599 494091 391802 391802 1 VTDLLGGLFSK Unmodified 1148.6441 0.64412484 346 O43615 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 88.324 88.395 2 1.2631E-07 102556 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 147.95 77.422 158740000 0 0 0 3015900 5955700 9441700 9201000 12615000 11730000 16962000 14506000 16145000 10996000 13161000 35013000 58528 346 52600 494092;494093;494094;494095;494096;494097;494098;494099;494100;494101;494102;494103 391803;391804;391805;391806;391807;391808;391809;391810;391811;391812;391813;391814;391815;391816 391804 13 VTDLNSLELDK Unmodified 1245.6452 0.64524705 584 O94782 USP1 Ubiquitin carboxyl-terminal hydrolase 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 61.94 62.079 2 0.015705 71094 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 72.848 44.121 65118000 0 0 0 0 6094000 8677600 6794100 3132900 0 8520000 8761400 0 8086000 4844500 10208000 58529 584 52601 494104;494105;494106;494107;494108;494109;494110;494111;494112 391817;391818;391819 391817 0 VTDLQGDLTK Unmodified 1088.5714 0.57135383 612 O94967 WDR47 WD repeat-containing protein 47 yes yes 0 0 0 By MS/MS 2 0 1 1 43.314 38.166 2 8.4107E-05 49551 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.28 61.599 62614000 0 62614000 0 0 0 0 0 0 0 0 0 0 0 0 0 58530 612 52602 494113 391820 391820 1 VTDTQEAECAGPPVPDPK Unmodified 1909.8728 0.87275716 4034 Q99614 TTC1 Tetratricopeptide repeat protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.467 47.63 2 1.3564E-39 52612 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 141.54 124.59 130380000 0 0 0 5003800 6488500 8272300 5774700 6857400 4510200 10125000 18583000 19176000 10509000 10160000 24918000 58531 4034 52603 494114;494115;494116;494117;494118;494119;494120;494121;494122;494123;494124;494125 391821;391822;391823;391824;391825;391826;391827;391828;391829;391830;391831;391832 391824 12 VTDYAEEK Unmodified 953.43419 0.43419164 4716 Q9NX55 HYPK Huntingtin-interacting protein K yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 13.624 13.881 2 0.0068017 13003 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 96.253 66.877 2454300000 0 0 0 0 0 0 150500000 227060000 116130000 431350000 654010000 847710000 2967000 8795200 15777000 58532 4716 52604 494126;494127;494128;494129;494130;494131;494132;494133;494134 391833;391834;391835;391836;391837;391838;391839 391836 7 VTDYIAEK Unmodified 937.47566 0.47566253 5058 Q9UPT5 EXOC7 Exocyst complex component 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 29.316 29.442 2 0.014208 31998 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 70.856 33.881 71224000 0 0 0 6640700 4082400 5846800 6846600 6524300 4276100 7058800 7905000 0 0 6671200 15373000 58533 5058 52605 494135;494136;494137;494138;494139;494140;494141;494142;494143;494144 391840;391841;391842 391840 3 VTEAEIVPMGK Unmodified 1172.6111 0.61111015 487 O75369 FLNB Filamin-B yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 54.535 54.923 2 0.0057656 61403 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 58.246 34.671 52805000 0 0 0 0 0 5771900 0 0 0 0 10967000 8209500 0 8063600 19793000 58534 487 52606 494145;494146;494147;494148;494149 391843;391844;391845 391844 2 VTEAPCYPGAPSTEASGQTGPQEPTSAR Unmodified 2845.2825 0.28246539 1409 P40222 TXLNA Alpha-taxilin yes yes 0 0 0 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 54.234 54.442 3 1.7613E-05 61750 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 31.441 28.829 19850000 0 0 0 0 0 3841100 0 0 0 2877500 7357300 0 0 5774100 0 58535 1409 52607 494150;494151;494152;494153 391846;391847 391846 2 VTEAPCYPGAPSTEASGQTGPQEPTSARA Unmodified 2916.3196 0.31957918 1409 P40222 TXLNA Alpha-taxilin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 56.035 56.118 3 8.8189E-38 63225 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.37 87.722 106530000 0 0 0 5624200 7110000 9250500 8558600 7516100 5812200 10737000 14119000 0 6471200 13509000 17827000 58536 1409 52608 494154;494155;494156;494157;494158;494159;494160;494161;494162;494163;494164 391848;391849;391850;391851;391852;391853;391854;391855;391856;391857;391858 391851 11 VTEASSNSFVAIK Unmodified 1351.6983 0.69834526 3630 Q92575 UBXN4 UBX domain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 53.083 53.143 2 4.6726E-11 68011 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.83 62.793 97710000 0 0 0 8491900 6194400 0 6655700 7827000 8469400 22237000 0 13935000 14884000 9015900 0 58537 3630 52609 494165;494166;494167;494168;494169;494170;494171;494172;494173;494174 391859;391860;391861;391862;391863;391864;391865;391866;391867 391861 8 VTEDEEPPTEQDK Unmodified 1515.6577 0.65766223 4919 Q9UI26 IPO11 Importin-11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.34 1 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 26.691 26.621 2 5.6214E-13 21301 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 145.55 140.5 252290000 70996000 8275500 0 7368800 6573800 21760000 9668800 8251200 8375500 17212000 18347000 22722000 13673000 16609000 22451000 58538 4919 52610 494175;494176;494177;494178;494179;494180;494181;494182;494183;494184;494185;494186;494187;494188;494189 391868;391869;391870;391871;391872;391873;391874;391875;391876;391877;391878;391879;391880;391881;391882;391883 391881 16 VTEEAIAR Unmodified 887.47125 0.47124585 4631 Q9NSY0 NRBP2 Nuclear receptor-binding protein 2 yes yes 0 0 0 By MS/MS 10 0 1 1 19.887 20.506 2 0.041524 19902 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.933 10.961 104490000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 104490000 58539 4631 52611 494190 391884 391884 1 VTEEAVAVK Unmodified 944.51786 0.51786169 210 O14757 CHEK1 Serine/threonine-protein kinase Chk1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 24.108 24.548 2 0.0035332 26249 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 89.752 15.314 30553000 0 0 0 0 0 0 0 5200700 0 0 0 8285200 4197600 4604900 8264400 58540 210 52612 494191;494192;494193;494194;494195;494196 391885;391886;391887;391888 391886 4 VTEEGTELSQR Unmodified 1247.5994 0.59935949 4077 Q99996 AKAP9 A-kinase anchor protein 9 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 2 1 1 1 1 1 20.09 20.232 2;3 0.00026232 23042 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 109.29 77.53 54555000 0 0 0 22752000 12181000 0 0 0 2581200 0 0 0 6477100 4908600 5655000 58541 4077 52613 494197;494198;494199;494200;494201;494202;494203 391889;391890;391891;391892;391893;391894 391890 6 VTEEIAIPLRR Unmodified 1295.7561 0.75613491 3958 Q96QE3 ATAD5 ATPase family AAA domain-containing protein 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 62.99 63.033 3 0.011856 72074 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 29.544 20.814 24913000 0 0 0 0 2166100 4398700 2858300 2858700 3293600 0 0 0 4589700 4748500 0 58542 3958 52614 494204;494205;494206;494207;494208;494209;494210 391895;391896 391895 2 VTEELAAATAQVSHLQLK Unmodified 1908.0316 0.031641064 2768 Q5T1M5 FKBP15 FK506-binding protein 15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.87 3.54 4 11 1 1 2 1 1 1 1 1 1 1 1 1 1 1 80.15 79.001 2;3 3.1204E-53 99001 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.23 112.8 252420000 21915000 74536000 52615000 920250 1970200 6196900 3433900 4398100 5186900 13869000 10235000 12677000 0 8167000 36297000 58543 2768 52615 494211;494212;494213;494214;494215;494216;494217;494218;494219;494220;494221;494222;494223;494224;494225 391897;391898;391899;391900;391901;391902;391903;391904;391905;391906;391907;391908;391909;391910 391901 14 VTEELFSGNK Unmodified 1122.5557 0.55570376 211 O14772 FPGT Fucose-1-phosphate guanylyltransferase yes yes 0 0 0 By MS/MS 2 0 1 1 48.962 43.314 2 6.3617E-06 56348 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 143.91 92.843 120510000 0 120510000 0 0 0 0 0 0 0 0 0 0 0 0 0 58544 211 52616 494226 391911 391911 1 VTEELLTDNR Unmodified 1188.5986 0.59863121 4895 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.417 43.592 2 0.0002563 48199 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 156.62 84.131 255790000 0 0 0 12386000 12219000 25358000 13055000 27791000 10492000 15252000 25007000 33444000 23681000 14032000 43068000 58545 4895 52617 494227;494228;494229;494230;494231;494232;494233;494234;494235;494236;494237;494238 391912;391913;391914;391915;391916;391917;391918;391919;391920;391921;391922;391923 391921 11 VTEEPMGITLK Oxidation (M) 1232.6322 0.63223953 2029 Q00013 MPP1 55 kDa erythrocyte membrane protein yes yes 0 1 0 By MS/MS 2 0 1 1 54.553 48.747 2 0.016147 63009 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 60.019 19.751 12725000 0 12725000 0 0 0 0 0 0 0 0 0 0 0 0 0 58546 2029 52618 494239 391924 391924 3282 1 VTEEPMGITLK Unmodified 1216.6373 0.6373249 2029 Q00013 MPP1 55 kDa erythrocyte membrane protein yes yes 0 0 0 By MS/MS 2 0 1 1 69.798 63.929 2 0.0094192 81488 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.18 53.86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58547 2029 52618 494240 391925 391925 1 VTEETVYTCTGHPLK Unmodified 1733.8294 0.82943578 1424 P40937 RFC5 Replication factor C subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 4 2 24 1 4 1 2 2 2 2 2 2 2 2 2 2 2 2 43.382 42.433 2;3 8.5214E-148 55448 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 234.61 207.13 1045500000 15360000 357810000 14606000 24728000 44035000 58430000 46564000 56304000 32725000 68634000 58006000 51099000 46903000 61210000 109050000 58548 1424 52619 494241;494242;494243;494244;494245;494246;494247;494248;494249;494250;494251;494252;494253;494254;494255;494256;494257;494258;494259;494260;494261;494262;494263;494264;494265;494266;494267;494268;494269;494270 391926;391927;391928;391929;391930;391931;391932;391933;391934;391935;391936;391937;391938;391939;391940 391928 10 VTEFGGELHEDGGK Unmodified 1473.6736 0.67358707 4878 Q9UFW8 CGGBP1 CGG triplet repeat-binding protein 1 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 37.365 37.546 3 0.039303 41414 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 21.254 13.343 33009000 0 0 0 0 2725900 3255600 2456800 0 0 2757500 3557700 0 0 2444000 15811000 58549 4878 52620 494271;494272;494273;494274;494275;494276;494277 391941 391941 1 VTEGGEPYR Unmodified 1006.472 0.47197413 2441 Q14697 GANAB Neutral alpha-glucosidase AB yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 16.024 16.219 2 0.0034358 16068 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 106.04 35.129 233790000 0 0 0 8418700 7055200 7328100 0 9027900 7659500 11039000 31969000 42065000 17029000 30270000 61930000 58550 2441 52621 494278;494279;494280;494281;494282;494283;494284;494285;494286;494287;494288 391942;391943;391944;391945;391946;391947;391948;391949;391950;391951 391943 10 VTEGLTDVILYHQPDDK Unmodified 1941.9684 0.96837211 407 O60506 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.96 3.45 6 1 20 3 3 1 2 1 1 1 1 2 2 2 2 2 2 2 77.612 76.671 2;3 2.022E-28 88631 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 112.8 102.7 671240000 120330000 187450000 52126000 13102000 8449800 24005000 12161000 14606000 21819000 31629000 30715000 48395000 21582000 24912000 59959000 58551 407 52622 494289;494290;494291;494292;494293;494294;494295;494296;494297;494298;494299;494300;494301;494302;494303;494304;494305;494306;494307;494308;494309;494310;494311;494312;494313;494314;494315 391952;391953;391954;391955;391956;391957;391958;391959;391960;391961;391962;391963;391964;391965;391966;391967;391968;391969 391953 17 VTEGLVDVILYHQPDDK Unmodified 1939.9891 0.98910755 322 O43390 HNRNPR Heterogeneous nuclear ribonucleoprotein R yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 90.427 84.192 2;3 7.9371E-26 108117 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 143.86 127.32 126600000 122800000 0 3805300 0 0 0 0 0 0 0 0 0 0 0 0 58552 322 52623 494316;494317;494318 391970;391971;391972 391971 3 VTEGQQERLER Unmodified 1343.6793 0.67934115 2262 Q13263 TRIM28 Transcription intermediary factor 1-beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.68 1.57 1 24 1 2 2 2 2 2 2 2 2 2 2 2 2 14.474 14.534 2;3 0.00017742 13267 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.062 55.288 2452200000 0 0 82574000 81498000 100840000 190820000 123620000 130140000 91064000 230100000 280040000 266630000 209220000 183890000 481710000 58553 2262 52624 494319;494320;494321;494322;494323;494324;494325;494326;494327;494328;494329;494330;494331;494332;494333;494334;494335;494336;494337;494338;494339;494340;494341;494342;494343 391973;391974;391975;391976;391977;391978;391979;391980;391981;391982;391983;391984;391985;391986;391987;391988 391976 11 VTEGSFVYK Unmodified 1028.5179 0.51786169 1620 P50395 GDI2 Rab GDP dissociation inhibitor beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.05 3.89 2 3 2 12 3 3 1 1 1 1 1 1 1 1 1 1 1 1 1 46.858 45.748 2 0.0028279 52047 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 116.73 57.808 3480100000 157400000 2798300000 78750000 23931000 9974700 14075000 12562000 16494000 9229300 20440000 63450000 53309000 12416000 45499000 164360000 58554 1620 52625 494344;494345;494346;494347;494348;494349;494350;494351;494352;494353;494354;494355;494356;494357;494358;494359;494360;494361;494362 391989;391990;391991;391992;391993;391994;391995;391996;391997;391998;391999;392000;392001;392002;392003;392004;392005;392006;392007;392008;392009;392010;392011;392012;392013 392007 23 VTEGSPVTFTCK Unmodified 1324.6333 0.63330216 3134 Q86TC9 MYPN Myopalladin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 47.083 47.355 2 0.0061769 52826 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 51.879 26.667 26092000 0 0 0 0 0 0 2739000 4505100 4404500 0 0 8513400 0 5930100 0 58555 3134 52626 494363;494364;494365;494366;494367;494368;494369 392014;392015;392016;392017 392016 4 VTEGVLDVIVYASAADK Unmodified 1748.9196 0.919631 2 A0AV96 RBM47 RNA-binding protein 47 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 96.773 90.956 2;3 6.3457E-05 115355 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.433 66.962 9209400 9209400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58556 2 52627 494370;494371 392018;392019 392019 2 VTELALTASDR Unmodified 1174.6194 0.61936665 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 2 1 1 1 1 1 1 1 49.581 49.738 2 6.5523E-48 54841 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 190.02 123.94 729240000 0 0 0 25893000 35363000 42982000 36204000 33691000 28454000 57370000 78999000 75901000 90478000 109900000 114010000 58557 1986 52628 494372;494373;494374;494375;494376;494377;494378;494379;494380;494381;494382;494383;494384 392020;392021;392022;392023;392024;392025;392026;392027;392028;392029;392030;392031;392032;392033;392034;392035;392036;392037 392023 18 VTELEDEVR Unmodified 1088.535 0.53496832 4174 Q9BV38 WDR18 WD repeat-containing protein 18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 37.717 37.966 2 0.00317 40753 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 128.69 80.838 119930000 0 0 0 0 7506500 8537600 8127000 0 4281600 9042300 8760000 18072000 20692000 16828000 18085000 58558 4174 52629 494385;494386;494387;494388;494389;494390;494391;494392;494393;494394 392038;392039;392040;392041;392042;392043;392044;392045;392046;392047 392044 10 VTELEQEK Unmodified 974.49204 0.49204087 5204 Q9Y4I1 MYO5A Unconventional myosin-Va yes yes 0 0 0 By MS/MS 10 0 1 1 32.027 31.648 2 0.043986 34873 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 49.058 2.2228 29186000 0 0 0 29186000 0 0 0 0 0 0 0 0 0 0 0 58559 5204 52630 494395 392048 392048 1 VTELEQQVAQAK Unmodified 1342.7092 0.70924429 3058 Q7L8J4 SH3BP5L SH3 domain-binding protein 5-like yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 46.966 41.518 2 3.2924E-15 53810 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 148.94 124.07 40608000 0 40608000 0 0 0 0 0 0 0 0 0 0 0 0 0 58560 3058 52631 494396;494397 392049;392050 392049 2 VTELRSELQR Unmodified 1229.6728 0.67279921 2645 Q1KMD3 HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 32.08 32.219 3 0.001582 35272 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 74.162 35.014 365710000 0 0 0 23229000 29282000 26949000 30982000 25593000 26290000 40653000 49592000 48814000 39033000 25295000 0 58561 2645 52632 494398;494399;494400;494401;494402;494403;494404;494405;494406;494407;494408 392051;392052;392053;392054;392055;392056;392057;392058;392059;392060;392061 392051 5 VTELVDAVYDPYK Unmodified 1510.7555 0.75552578 2005 P83436 COG7 Conserved oligomeric Golgi complex subunit 7 yes yes 0 0 0 By MS/MS 2 0 1 1 80.902 76.197 2 4.3082E-22 94787 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 147.72 122.16 54833000 0 54833000 0 0 0 0 0 0 0 0 0 0 0 0 0 58562 2005 52633 494409 392062;392063 392063 2 VTENGGSPQGIK Unmodified 1185.599 0.59896556 3657 Q92766 RREB1 Ras-responsive element-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 16.025 16.193 2 0.0034705 15652 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 79.489 68.078 65701000 0 0 0 3344800 3106000 3844300 5351600 3766300 4430600 4037300 6711400 15295000 8331200 0 7483000 58563 3657 52634 494410;494411;494412;494413;494414;494415;494416;494417;494418;494419;494420 392064;392065;392066 392066 3 VTENLRVLGEAQTK Unmodified 1556.8522 0.85222014 4096 Q9BQG0 MYBBP1A Myb-binding protein 1A yes yes 0 0 1 By MS/MS 2 0 1 1 53.955 50.058 3 0.030339 62807 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 28.986 10.883 3304400 0 0 3304400 0 0 0 0 0 0 0 0 0 0 0 0 58564 4096 52635 494421 392067 392067 1 VTENQIPAK Unmodified 998.53966 0.53965977 4577 Q9NQW6 ANLN Actin-binding protein anillin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.781 20.988 2 2.126E-05 20708 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 151.5 92.514 302800000 0 0 0 22001000 18792000 24310000 21208000 16038000 16300000 25710000 35097000 38004000 29972000 25344000 30020000 58565 4577 52636 494422;494423;494424;494425;494426;494427;494428;494429;494430;494431;494432;494433 392068;392069;392070;392071;392072;392073;392074;392075;392076;392077;392078 392072 11 VTEQALLRPQSK Unmodified 1368.7725 0.77251325 4495 Q9HB21 PLEKHA1 Pleckstrin homology domain-containing family A member 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 36.051 32.558 3 0.038082 24236 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 23.118 0 11640000 7934300 0 1883800 0 0 0 1822400 0 0 0 0 0 0 0 0 58566 4495 52637 494434;494435;494436 392079;392080 392079 1 VTEQEVDAIGQTLVDPK Unmodified 1840.9418 0.941823 4158 Q9BU89 DOHH Deoxyhypusine hydroxylase yes yes 0 0 0 By MS/MS 2 0 1 1 85.118 80.375 2 0.020998 99833 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 38.839 18.733 31144000 0 31144000 0 0 0 0 0 0 0 0 0 0 0 0 0 58567 4158 52638 494437 392081 392081 1 VTEQEWR Unmodified 946.45084 0.45084476 886 P09497 CLTB Clathrin light chain B yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 23.767 23.766 2 0.03326 23784 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 72.138 14.675 7075500 0 0 0 0 1854900 0 0 0 0 0 0 0 0 5220600 0 58568 886 52639 494438;494439 392082 392082 1 VTEQEWREK Unmodified 1203.5884 0.58840088 886 P09497 CLTB Clathrin light chain B yes yes 0 0 1 By MS/MS By matching By MS/MS 2 0 3 1 1 1 22.892 18.957 2 0.016328 24263 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 168.26 168.26 44874000 6975500 11823000 26076000 0 0 0 0 0 0 0 0 0 0 0 0 58569 886 52640 494440;494441;494442 392083 392083 0 VTEQLIEAINNGDFEAYTK Unmodified 2154.0481 0.04807899 2316 Q13557 CAMK2D Calcium/calmodulin-dependent protein kinase type II subunit delta yes yes 0 0 0 By MS/MS 2 0 1 1 91.278 86.368 3 0.016095 107320 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 34.265 26.461 27827000 0 27827000 0 0 0 0 0 0 0 0 0 0 0 0 0 58570 2316 52641 494443 392084 392084 0 VTESIEDIK Unmodified 1032.5339 0.53390569 2834 Q5VZL5 ZMYM4 Zinc finger MYM-type protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 41.795 40.826 2 0.005086 51214 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 111.74 27.241 128420000 5858000 51520000 0 0 4836500 11145000 7292500 4212100 6065000 8214300 8785100 12208000 8285900 0 0 58571 2834 52642 494444;494445;494446;494447;494448;494449;494450;494451;494452;494453;494454 392085;392086;392087;392088;392089;392090;392091;392092;392093;392094;392095 392088 11 VTESNLEK Unmodified 918.46583 0.46582612 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 12.847 13.031 2 0.016961 11269 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.429 20.477 116620000 0 0 0 0 9282600 11731000 12645000 0 10191000 11304000 8425100 17974000 12030000 12205000 10831000 58572 2804 52643 494455;494456;494457;494458;494459;494460;494461;494462;494463;494464 392096;392097;392098;392099 392098 4 VTESVLK Unmodified 774.44872 0.4487195 2880 Q6GYQ0 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 yes yes 0 0 0 By MS/MS 2 0 1 1 48.353 42.705 2 0.031352 55407 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.673 5.4298 106350000 0 106350000 0 0 0 0 0 0 0 0 0 0 0 0 0 58573 2880 52644 494465 392100 392100 1 VTETVMNGGMK Oxidation (M) 1181.542 0.54204431 2727 Q5H9R7 PPP6R3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 yes yes 0 1 0 By MS/MS 2 0 1 1 23.759 19.733 2 0.0024874 26165 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.083 53.009 14655000 0 14655000 0 0 0 0 0 0 0 0 0 0 0 0 0 58574 2727 52645 494466 392101 392101 4372 1 VTETVMNGGMK Unmodified 1165.5471 0.54712969 2727 Q5H9R7 PPP6R3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 32.89 33.423 2 0.012798 36172 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 47.187 25.227 12935000 0 0 0 0 0 0 0 0 0 2462800 0 4522500 0 0 5949700 58575 2727 52645 494467;494468;494469 392102;392103 392103 2 VTEYLYANK Unmodified 1099.555 0.55497548 1154 P23368 ME2 NAD-dependent malic enzyme, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 39.987 40.073 2 0.0034839 43868 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 103.75 86.784 483170000 0 0 0 24700000 44323000 37395000 43262000 52324000 45459000 66585000 73975000 95144000 0 0 0 58576 1154 52646 494470;494471;494472;494473;494474;494475;494476;494477;494478 392104;392105;392106;392107;392108;392109;392110;392111 392110 7 VTFAPTYK Unmodified 925.49092 0.49091866 327 O43426 SYNJ1 Synaptojanin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 47.805 45.844 2 0.031244 59147 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.213 53.285 70586000 13575000 39451000 0 0 0 0 0 0 0 3455100 0 3592800 3743600 0 6768300 58577 327 52647 494479;494480;494481;494482;494483;494484 392112;392113;392114 392113 3 VTFEVFVQADAPHGVAWDSK Unmodified 2202.0746 0.074568512 3702 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 0 0 0 By MS/MS 2 0 2 2 92.295 84.165 3 0.00013667 109124 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.432 42.774 11343000 11343000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58578 3702 52648 494485;494486 392115;392116 392116 1 VTFNIPR Unmodified 845.47594 0.4759373 2433 Q14686 NCOA6 Nuclear receptor coactivator 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.284 61.386 2 0.023574 71161 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 92.692 60.579 100230000 0 0 0 4555300 4763700 6810100 7455300 9805900 5894200 8997200 9858400 11225000 8875600 8236000 13751000 58579 2433 52649 494487;494488;494489;494490;494491;494492;494493;494494;494495;494496;494497;494498 392117;392118;392119;392120;392121;392122;392123;392124;392125;392126 392125 10 VTFQGVGDEEDEDEIIVPK Unmodified 2118.0005 0.0004600951 655 O95400 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.19 3.64 3 3 10 2 4 1 1 1 1 1 1 1 1 1 1 80.546 78.87 2;3 1.4773E-09 97238 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 132.95 119.97 362710000 29163000 273620000 0 0 4945800 4466800 3008800 3192000 3554000 4816100 7858900 8504900 0 5395200 14182000 58580 655 52650 494499;494500;494501;494502;494503;494504;494505;494506;494507;494508;494509;494510;494511;494512;494513;494514 392127;392128;392129;392130;392131;392132;392133;392134;392135;392136;392137;392138 392129 11 VTFQTPLRDPQTHR Unmodified 1694.8853 0.8852516 5273 Q9Y6A5 TACC3 Transforming acidic coiled-coil-containing protein 3 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 47.59 47.822 4 0.0092364 53741 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 40.025 35.408 82375000 0 0 0 0 2375800 5945000 5458700 7487200 5351900 7382000 4476700 16002000 7314600 9003700 11577000 58581 5273 52651 494515;494516;494517;494518;494519;494520;494521;494522;494523;494524;494525 392139;392140;392141;392142 392141 4 VTFRHDSSTVEVQDDHIK Unmodified 2112.0236 0.023595574 2688 Q4LE39 ARID4B AT-rich interactive domain-containing protein 4B yes yes 0 0 1 By matching By MS/MS By MS/MS 10 0 3 1 1 1 39.067 39.412 4 0.0049595 42629 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.64 26.99 19779000 0 0 0 0 0 0 0 5095900 6577800 0 0 0 0 0 8105300 58582 2688 52652 494526;494527;494528 392143;392144 392143 2 VTFVNFTVTR Unmodified 1182.6397 0.63970816 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching 10 0 5 1 1 1 1 1 78.28 78.308 2 0.0049755 90457 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 70.816 39.513 19504000 0 0 0 0 3127900 7643400 2896400 0 4491900 1344100 0 0 0 0 0 58583 2392 52653 494529;494530;494531;494532;494533 392145;392146 392145 1 VTGAEQSEPGAK Unmodified 1172.5673 0.56733108 2737 Q5JTC6 AMER1 APC membrane recruitment protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching 10 0 7 1 1 1 1 1 1 1 9.0468 9.0914 2 0.014416 7772 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 54.982 24.418 7521000 0 0 0 412480 1052500 755430 953880 771120 0 0 0 2274100 1301400 0 0 58584 2737 52654 494534;494535;494536;494537;494538;494539;494540 392147 392147 1 VTGASFVVFNGALK Unmodified 1408.7715 0.77145062 3086 Q7Z3T8 ZFYVE16 Zinc finger FYVE domain-containing protein 16 yes yes 0 0 0 By MS/MS 2 0 1 1 89.043 80.913 2 0.0011511 105270 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88.056 67.916 5466000 5466000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58585 3086 52655 494541 392148;392149 392149 2 VTGDDSMR Unmodified 879.37563 0.37563091 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 7.5785 7.6896 2 0.035078 5893 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 52.716 42.966 29038000 0 0 0 1449400 1787400 4081000 2723700 3239700 0 1319200 7065400 2317400 659280 0 4395500 58586 1124 52656 494542;494543;494544;494545;494546;494547;494548;494549;494550;494551 392150;392151 392150 2 VTGDTVYNMLR Unmodified 1267.6231 0.62307182 2982 Q6UX04 CWC27 Peptidyl-prolyl cis-trans isomerase CWC27 homolog yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 70.581 70.887 2 0.018457 80927 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.512 26.674 4594200 0 0 0 0 0 0 0 0 0 0 0 0 0 1371800 3222300 58587 2982 52657 494552;494553 392152 392152 1 VTGEADVEFATHEDAVAAMSK Oxidation (M) 2192.9896 0.98957783 1309 P31943 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 59.068 59.298 3 9.9354E-06 66927 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.095 39.22 51961000 0 0 0 0 0 2915600 3898300 3312900 6687300 8379000 17665000 0 0 0 9103500 58588 1309 52658 494554;494555;494556;494557;494558;494559;494560 392153 392153 1939 0 VTGEADVEFATHEEAVAAMSK Oxidation (M) 2207.0052 0.005227897 1692 P52597 HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 64.711 64.59 3 5.2408E-05 73830 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 48.656 35.807 13902000 0 0 0 0 4632200 5908400 0 3361700 0 0 0 0 0 0 0 58589 1692 52659 494561;494562;494563 392154 392154 2738 1 VTGEGRVK Unmodified 844.47667 0.47666558 1124 P21333 FLNA Filamin-A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 5.6348 2.5887 2 0.013734 4619 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 152.39 31.868 2363700000 1181600000 1120200000 61817000 0 0 0 0 0 0 0 0 0 0 0 0 58590 1124 52660 494564;494565;494566;494567 392155;392156;392157;392158 392155 2 VTGEVTDPSGK Unmodified 1088.535 0.53496832 1132 P22059 OSBP Oxysterol-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.88 2.98 1 7 1 1 1 1 1 1 1 1 27.223 28.047 2 0.00013419 92745 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 112.11 77.3 118530000 36031000 0 0 5360100 0 7875900 0 0 6704700 14888000 0 13611000 12519000 0 21543000 58591 1132 52661 494568;494569;494570;494571;494572;494573;494574;494575 392159;392160;392161;392162;392163;392164 392163 6 VTGGIFSVTK Unmodified 1007.5651 0.56514624 3546 Q8WUH6 TMEM263 Transmembrane protein 263 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 2 1 1 1 1 57.686 57.826 2 0.00055012 65858 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 123.86 76.011 7198900000 0 0 0 422820000 609410000 602360000 648360000 526850000 404350000 611960000 887160000 875800000 367530000 429550000 812710000 58592 3546 52662 494576;494577;494578;494579;494580;494581;494582;494583;494584;494585;494586;494587;494588 392165;392166;392167;392168;392169;392170;392171;392172;392173;392174;392175;392176;392177;392178;392179;392180;392181;392182;392183;392184;392185;392186;392187;392188;392189;392190;392191;392192;392193;392194 392181 29 VTGGYPFEAYK Unmodified 1230.5921 0.59208927 3 A0AVT1 UBA6 Ubiquitin-like modifier-activating enzyme 6 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 67.235 60.923 2 0.00198 78255 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.05 88.897 334710000 10411000 324300000 0 0 0 0 0 0 0 0 0 0 0 0 0 58593 3 52663 494589;494590;494591 392195;392196;392197 392195 2 VTGMGVRNGTDK Unmodified 1233.6136 0.61356977 1762 P55210 CASP7 Caspase-7;Caspase-7 subunit p20;Caspase-7 subunit p11 yes yes 0 0 1 By MS/MS By matching 2 0 3 2 1 16.424 12.493 2;3 8.0227E-05 18346 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.39 71.425 99343000 88000000 11343000 0 0 0 0 0 0 0 0 0 0 0 0 0 58594 1762 52664 494592;494593;494594 392198;392199;392200 392198 3 VTGMIDLDTSK Unmodified 1178.5853 0.58528933 4353 Q9H1P3 OSBPL2 Oxysterol-binding protein-related protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 62.136 56.255 2 2.5569E-06 72435 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.09 77.981 31405000 0 31405000 0 0 0 0 0 0 0 0 0 0 0 0 0 58595 4353 52665 494595 392201 392201 1 VTGPGAEAVQIVAK Unmodified 1338.7507 0.75071518 3755 Q96BD5 PHF21A PHD finger protein 21A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 63.792 63.194 2 0.0014824 80647 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.87 81.49 606150000 0 318050000 3820400 0 21004000 23903000 16151000 30164000 13665000 30288000 25546000 41780000 26005000 22696000 33080000 58596 3755 52666 494596;494597;494598;494599;494600;494601;494602;494603;494604;494605;494606;494607;494608 392202;392203;392204;392205;392206;392207;392208;392209;392210 392203 3 VTGPQATTGTPLVTMRPASQAGK Oxidation (M) 2284.1845 0.18452967 1663 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes yes 0 1 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 47.317 47.308 3 8.2654E-09 53114 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 61.522 54.408 168100000 0 0 0 19216000 19541000 30332000 0 20780000 26284000 0 31408000 0 0 20539000 0 58597 1663 52667 494609;494610;494611;494612;494613;494614;494615 392211;392212;392213;392214;392215 392213 2678 5 VTGPQATTGTPLVTMRPASQAGK Unmodified 2268.1896 0.18961504 1663 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.745 59.854 3 3.8458E-10 68200 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 65.753 60.084 267000000 0 0 0 17118000 14138000 20753000 17172000 20235000 13633000 24848000 23335000 29122000 18327000 26082000 42237000 58598 1663 52667 494616;494617;494618;494619;494620;494621;494622;494623;494624;494625;494626;494627 392216;392217;392218;392219;392220;392221;392222;392223;392224;392225;392226;392227;392228;392229 392217 14 VTGQNQEQFLLLAK Unmodified 1587.8621 0.86205654 4863 Q9UBW8 COPS7A COP9 signalosome complex subunit 7a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 78.815 77.692 2 4.1093E-22 89320 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 178.71 149.76 865340000 22041000 419480000 10945000 11754000 16368000 39619000 23559000 23554000 15777000 42400000 45918000 54169000 30808000 26061000 82880000 58599 4863 52668 494628;494629;494630;494631;494632;494633;494634;494635;494636;494637;494638;494639;494640;494641;494642;494643 392230;392231;392232;392233;392234;392235;392236;392237;392238;392239;392240;392241;392242;392243;392244;392245;392246 392234 17 VTGSLSSAK Unmodified 848.46035 0.46034682 1405 P39748 FEN1 Flap endonuclease 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 6.65 4.04 3 2 2 10 3 3 1 1 1 1 1 1 1 1 1 1 1 28.219 28.211 2 0.0032581 9373 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 90.64 24.136 3145700000 46725000 2775000000 24207000 19175000 0 46268000 28012000 20686000 14113000 35303000 0 37522000 23095000 22769000 52894000 58600 1405 52669 494644;494645;494646;494647;494648;494649;494650;494651;494652;494653;494654;494655;494656;494657;494658;494659;494660 392247;392248;392249;392250;392251;392252;392253;392254;392255;392256;392257;392258 392258 8 VTGTLDANR Unmodified 945.48796 0.48795855 2626 Q16658 FSCN1 Fascin yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By matching 10 0 6 1 1 1 1 1 1 15.505 15.807 2 0.0030604 15491 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 91.853 28.799 457530000 0 0 0 12702000 0 0 0 0 0 0 92859000 61358000 6758000 56699000 227160000 58601 2626 52670 494661;494662;494663;494664;494665;494666 392259;392260;392261 392260 3 VTGTLDANRSSYDVFQLEFNDGAYNIK Unmodified 3036.4465 0.44649425 2626 Q16658 FSCN1 Fascin yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 2 2 3 1 91.809 86.056 3 1.1851E-166 110094 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 183.49 175.77 420250000 416740000 3509100 0 0 0 0 0 0 0 0 0 0 0 0 0 58602 2626 52671 494667;494668;494669;494670 392262;392263;392264;392265 392265 4 VTGTLETK Unmodified 847.4651 0.46509784 1485 P45880 VDAC2 Voltage-dependent anion-selective channel protein 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 12.861 13 2 0.0096391 11973 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 82.241 40.938 41187000 0 0 0 9804300 2326200 3004500 0 5074400 2285900 3719000 0 5381500 4292300 2256900 3042400 58603 1485 52672 494671;494672;494673;494674;494675;494676;494677;494678;494679;494680 392266;392267;392268;392269 392267 4 VTGVGPPANEDTREK Unmodified 1568.7794 0.77944912 2763 Q5SXM2 SNAPC4 snRNA-activating protein complex subunit 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 22.442 22.769 3 8.1491E-05 23348 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 52.112 35.974 70664000 0 0 0 0 0 0 7719000 5158900 4137500 7700800 10684000 14855000 0 10891000 9518400 58604 2763 52673 494681;494682;494683;494684;494685;494686;494687;494688 392270;392271;392272;392273;392274;392275;392276;392277;392278;392279;392280 392280 11 VTGVPLSYLLSR Unmodified 1303.75 0.7499869 1234 P28340 POLD1 DNA polymerase delta catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 88.722 88.793 2 0.00043532 102173 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 79.974 62.11 123520000 0 0 0 2525200 4455200 12874000 5959300 9375700 8202000 14478000 9629500 13002000 7737800 9241600 26040000 58605 1234 52674 494689;494690;494691;494692;494693;494694;494695;494696;494697;494698;494699;494700 392281;392282;392283;392284;392285;392286;392287;392288;392289;392290;392291;392292;392293;392294;392295;392296;392297 392289 17 VTHAVVTVPAYFNDAQR Unmodified 1886.9639 0.96389585 932 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 4 24 1 1 2 2 2 2 2 2 2 2 2 2 2 2 2 71.686 71.362 2;3 2.6235E-65 82033 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 195.25 172.02 2488100000 61034000 316350 4561500 88457000 88957000 165730000 106740000 133910000 131250000 217530000 238290000 329140000 149680000 218790000 553690000 58606 932 52675 494701;494702;494703;494704;494705;494706;494707;494708;494709;494710;494711;494712;494713;494714;494715;494716;494717;494718;494719;494720;494721;494722;494723;494724;494725;494726;494727;494728 392298;392299;392300;392301;392302;392303;392304;392305;392306;392307;392308;392309;392310;392311;392312;392313;392314;392315;392316;392317;392318;392319;392320;392321;392322;392323;392324;392325;392326;392327;392328;392329;392330 392300 30 VTHAVVTVPAYFNDAQRQATK Unmodified 2315.2022 0.20222864 932 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 1 By MS/MS 2 0 2 2 76.275 68.145 3;4 1.2646E-08 89753 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.568 70.859 240870000 240870000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58607 932 52676 494729;494730 392331;392332 392332 2 VTHELQAMK Unmodified 1055.5434 0.54336494 1066 P17980 PSMC3 26S protease regulatory subunit 6A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.565 19.763 2 0.0051946 19719 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 80.676 60.222 155480000 0 0 0 9753700 9489500 12300000 5214400 4555000 2987000 25975000 27249000 32154000 5641000 5032400 15130000 58608 1066 52677 494731;494732;494733;494734;494735;494736;494737;494738;494739;494740;494741;494742 392333;392334;392335;392336;392337;392338;392339;392340 392337 8 VTHELQAMK Oxidation (M) 1071.5383 0.53827956 1066 P17980 PSMC3 26S protease regulatory subunit 6A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 9.228 9.2346 2 0.0026255 7638 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 97.635 77.858 34137000 0 0 0 5442600 7202200 6280200 3927800 0 2669000 8615200 0 0 0 0 0 58609 1066 52677 494743;494744;494745;494746;494747;494748;494749 392341;392342;392343;392344;392345 392344 1509 4 VTHESPTTGAK Unmodified 1126.5619 0.56185177 4221 Q9BX70 BTBD2 BTB/POZ domain-containing protein 2 yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 6.5091 3.7788 2 1.7901E-06 5655 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.83 98.401 14317000 0 12965000 1352600 0 0 0 0 0 0 0 0 0 0 0 0 58610 4221 52678 494750;494751 392346 392346 1 VTHETSAHEGQTEAPSIDEK Unmodified 2164.9873 0.98726965 1020 P15374 UCHL3 Ubiquitin carboxyl-terminal hydrolase isozyme L3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 1 1 1 1 1 2 2 2 2 2 22.52 22.819 3;4 1.1742E-63 23317 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 143.57 127.34 194680000 0 0 0 2722100 894550 3472600 2742200 0 1280500 4902800 29414000 42000000 12431000 25283000 69540000 58611 1020 52679 494752;494753;494754;494755;494756;494757;494758;494759;494760;494761;494762;494763;494764;494765;494766;494767 392347;392348;392349;392350;392351;392352 392352 6 VTHLSETR Unmodified 941.49304 0.49304393 5102 Q9Y2H2 INPP5F Phosphatidylinositide phosphatase SAC2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 7.604 7.7208 2 0.030437 6206 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.531 6.9693 20748000 0 0 0 907320 1121300 1680200 746240 1353000 1085500 2040700 4167000 2478500 2722000 0 2445600 58612 5102 52680 494768;494769;494770;494771;494772;494773;494774;494775;494776;494777;494778 392353;392354 392354 2 VTHVEPWEK Unmodified 1123.5662 0.56620887 2815 Q5VTL8 PRPF38B Pre-mRNA-splicing factor 38B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 32.962 32.593 2 0.0033909 34629 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 105.1 83.801 52074000 5773900 0 0 0 2802800 0 5033200 4549400 2719200 4357900 5900000 7158800 4449800 3478100 5851400 58613 2815 52681 494779;494780;494781;494782;494783;494784;494785;494786;494787;494788;494789;494790 392355;392356;392357;392358;392359;392360;392361;392362;392363;392364;392365;392366;392367 392366 13 VTIAEVK Unmodified 758.4538 0.45380487 3118 Q7Z6R9 TFAP2D Transcription factor AP-2-delta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.754 38.934 2 0.040011 44096 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 68.787 17.33 66284000 0 0 0 7784900 2907000 4431100 4293200 6005900 3609900 6923600 7908600 7188600 4817600 3512200 6901700 58614 3118 52682 494791;494792;494793;494794;494795;494796;494797;494798;494799;494800;494801;494802 392368;392369;392370 392370 3 VTIAQGGVLPNIQAVLLPK Unmodified 1930.1615 0.16153303 791 Q99878;Q96KK5;Q9BTM1;Q16777;Q93077;Q7L7L0;Q6FI13;P20671;P0C0S8;P04908 HIST1H2AJ;HIST1H2AH;H2AFJ;HIST2H2AC;HIST1H2AC;HIST3H2A;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-B/E yes no 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 98.851 92.418 3 0.00010075 116877 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.256 58.718 50066000 36711000 13355000 0 0 0 0 0 0 0 0 0 0 0 0 0 58615 791 52683 494803;494804 392371;392372 392372 2 VTIEYYSQLK Unmodified 1242.6496 0.64960415 1561 P49189 ALDH9A1 4-trimethylaminobutyraldehyde dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 65.123 65.565 2 0.011299 73985 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.568 46.781 63984000 0 0 0 0 0 0 0 0 0 0 24011000 0 0 0 39973000 58616 1561 52684 494805;494806 392373;392374 392373 2 VTIFTVPENCR Unmodified 1334.6653 0.66527099 2160 Q08554 DSC1 Desmocollin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 70.448 70.434 2 0.00047026 81308 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 136.57 106.8 434390000 0 0 0 118770000 38144000 42572000 29071000 0 28038000 49658000 41213000 0 52209000 34717000 0 58617 2160 52685 494807;494808;494809;494810;494811;494812;494813;494814;494815 392375;392376;392377;392378;392379;392380;392381;392382 392380 7 VTILCDK Unmodified 847.44734 0.44733929 3140 Q86U42;A6NDY0 PABPN1;PABPN1L Polyadenylate-binding protein 2;Embryonic polyadenylate-binding protein 2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.208 34.391 2 0.037306 36555 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 69.998 21.825 109210000 0 0 0 8126800 5178400 8057800 7015000 5834600 7892500 7595600 13330000 13718000 10593000 11074000 10796000 58618 3140 52686 494816;494817;494818;494819;494820;494821;494822;494823;494824;494825;494826;494827 392383;392384 392384 2 VTILGHVQR Unmodified 1021.6033 0.60326308 2064 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.816 37.996 2 0.0049392 41027 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 85.212 57.038 184680000 0 0 0 5812600 9389100 11340000 12576000 23038000 8463800 18465000 15077000 18373000 23866000 12021000 26258000 58619 2064 52687 494828;494829;494830;494831;494832;494833;494834;494835;494836;494837;494838;494839 392385;392386;392387;392388;392389;392390;392391;392392 392389 7 VTILQSSDSR Unmodified 1104.5775 0.57750184 5007 Q9ULV3 CIZ1 Cip1-interacting zinc finger protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 34.809 34.998 2 0.029134 38210 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 43.442 15.233 28528000 0 0 0 2622500 0 0 4685400 4022800 0 0 0 0 4511000 5140600 7546000 58620 5007 52688 494840;494841;494842;494843;494844;494845 392393 392393 1 VTIPPPSSSVAISNHVTPPPIPK Unmodified 2334.2947 0.29473204 3406 Q8NC96 NECAP1 Adaptin ear-binding coat-associated protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 83.466 78.746 3 0.0071896 97922 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 26.84 18.652 21554000 0 21554000 0 0 0 0 0 0 0 0 0 0 0 0 0 58621 3406 52689 494846 392394;392395 392395 2 VTISFMK Unmodified 824.44661 0.44661101 1709 P53041 PPP5C Serine/threonine-protein phosphatase 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 62.655 63.029 2 0.030787 72073 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 74.415 28.045 36207000 0 0 0 0 0 0 0 0 0 0 7350500 0 0 9336800 19520000 58622 1709 52690 494847;494848;494849 392396 392396 1 VTISGEEK Unmodified 861.44436 0.4443624 2053 Q01433 AMPD2 AMP deaminase 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 15.216 15.387 2 0.028761 14857 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 56.547 12.689 46690000 0 0 0 1657800 1981500 1274700 2121800 2294300 1289100 0 7037200 5680300 5377500 6784400 11192000 58623 2053 52691 494850;494851;494852;494853;494854;494855;494856;494857;494858;494859;494860 392397;392398;392399 392399 3 VTLAVSDLQK Unmodified 1072.6128 0.61282471 4506 Q9HC38 GLOD4 Glyoxalase domain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.9 3.81 3 1 6 1 2 1 1 1 1 1 1 1 60.146 57.988 2 0.00053542 74055 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.73 57.915 1473100000 46618000 1335200000 12096000 6487100 0 0 3341500 0 0 0 11202000 12281000 0 10765000 35107000 58624 4506 52692 494861;494862;494863;494864;494865;494866;494867;494868;494869;494870 392400;392401;392402;392403;392404;392405;392406;392407;392408 392400 8 VTLDLQNSTEK Unmodified 1246.6405 0.64049603 1469 P42858 HTT Huntingtin yes yes 0 0 0 By MS/MS 2 0 1 1 50.855 45.109 2 7.9442E-05 58512 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 141.02 81.422 39226000 0 39226000 0 0 0 0 0 0 0 0 0 0 0 0 0 58625 1469 52693 494871 392409 392409 1 VTLDPVQLESSLLR Unmodified 1568.8774 0.87737225 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 91.913 92.041 2 0.0017669 106677 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.153 55.621 3063800 0 0 0 0 0 0 0 0 0 1216500 0 0 0 0 1847300 58626 5049 52694 494872;494873 392410;392411 392411 2 VTLEGPSATAPASSPGLAK Unmodified 1752.9258 0.92577901 2921 Q6P1N0 CC2D1A Coiled-coil and C2 domain-containing protein 1A yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.872 58.983 2 2.8717E-17 66381 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.651 77.026 166200000 0 0 0 9503500 8842300 13562000 12844000 9099400 8390300 15632000 18944000 17917000 13625000 12767000 25073000 58627 2921 52695 494874;494875;494876;494877;494878;494879;494880;494881;494882;494883;494884;494885 392412;392413;392414;392415;392416;392417;392418;392419;392420;392421;392422 392415 11 VTLELGGK Unmodified 815.47527 0.4752686 1527;796;585;1290;720 P47895;P30837;P05091;O94788;P00352 ALDH1A3;ALDH1B1;ALDH2;ALDH1A2;ALDH1A1 Aldehyde dehydrogenase family 1 member A3;Aldehyde dehydrogenase X, mitochondrial;Aldehyde dehydrogenase, mitochondrial;Retinal dehydrogenase 2;Retinal dehydrogenase 1 no no 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 34.992 35.18 2 0.036964 39445 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 51.572 0 19584000 0 0 0 0 2549500 0 0 0 0 4334000 0 5851900 0 6848600 0 58628 1527;1290;796;585;720 52696 494886;494887;494888;494889 392423 392423 1 VTLELSNGSMVR Oxidation (M) 1320.6708 0.6707503 4345 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 76.902 77.189 2 0.0031242 88670 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.563 28.821 10343000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10343000 58629 4345 52697 494890;494891 392424;392425 392424 5810 2 VTLEYRPVIDK Unmodified 1331.7449 0.74490152 1293 P31040 SDHA Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By matching 2 0 4 2 1 1 66.118 59.551 2;3 0.010229 79605 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.26 63.86 140410000 104490000 33175000 2745600 0 0 0 0 0 0 0 0 0 0 0 0 58630 1293 52698 494892;494893;494894;494895 392426;392427;392428 392427 1 VTLGTQPTVLR Unmodified 1183.6925 0.69247202 2608 Q16531 DDB1 DNA damage-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.046 58.161 2 0.00010591 65587 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 126.24 62.709 362570000 0 0 0 14370000 12500000 20806000 13419000 16633000 12743000 28806000 49260000 37359000 26211000 36113000 94354000 58631 2608 52699 494896;494897;494898;494899;494900;494901;494902;494903;494904;494905;494906;494907 392429;392430;392431;392432;392433;392434;392435;392436;392437;392438;392439 392437 11 VTLGTQQR Unmodified 901.49813 0.49812931 2165 Q08AF3 SLFN5 Schlafen family member 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 2 2 1 2 2 1 2 1 2 2 2 1 17.987 18.152 2 0.0060605 18806 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 138.24 66.883 372620000 0 0 0 54725000 20551000 11189000 27617000 28843000 7856800 30082000 11778000 26369000 115110000 23987000 14523000 58632 2165 52700 494908;494909;494910;494911;494912;494913;494914;494915;494916;494917;494918;494919;494920;494921;494922;494923;494924;494925;494926;494927 392440;392441;392442;392443;392444;392445;392446;392447;392448;392449;392450;392451 392442 9 VTLKPILDEICDSSK Unmodified 1716.8968 0.89678707 2511 Q15283 RASA2 Ras GTPase-activating protein 2 yes yes 0 0 1 By MS/MS 2 0 1 1 87.915 79.784 3 0.0095014 103848 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 44.567 41.526 6824800 6824800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58633 2511 52701 494928 392452 392452 1 VTLLDGTEYSCDLEK Unmodified 1741.808 0.80803164 334 O43491 EPB41L2 Band 4.1-like protein 2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 78.312 74.234 2 2.4345E-15 92388 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.24 127.69 64544000 0 64544000 0 0 0 0 0 0 0 0 0 0 0 0 0 58634 334 52702 494929;494930 392453 392453 1 VTLLDLMIAK Unmodified 1115.6624 0.66241744 4831 Q9UBB4 ATXN10 Ataxin-10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 94.226 94.359 2 0.0033461 109613 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 76.827 72.714 24081000 0 0 0 0 0 3197800 1075000 978460 1856800 3407800 2293400 1238100 1023000 2249100 6761500 58635 4831 52703 494931;494932;494933;494934;494935;494936;494937;494938;494939;494940 392454;392455;392456;392457;392458;392459;392460 392455 7 VTLLDLMIAK Oxidation (M) 1131.6573 0.65733206 4831 Q9UBB4 ATXN10 Ataxin-10 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 84.16 84.298 2 0.0040162 97169 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.299 43.807 68509000 0 0 0 0 0 0 9605500 0 8303500 15820000 0 9480200 5693100 8321700 11284000 58636 4831 52703 494941;494942;494943;494944;494945;494946;494947 392461;392462;392463;392464;392465 392463 6204 5 VTLLEGDHVR Unmodified 1137.6142 0.6142217 517 O75534 CSDE1 Cold shock domain-containing protein E1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 41.398 41.615 3 0.0053616 47260 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 60.064 47.488 158050000 0 0 0 0 18429000 0 0 0 0 0 0 0 32411000 38878000 68334000 58637 517 52704 494948;494949;494950;494951 392466;392467;392468 392468 3 VTLLLSSK Unmodified 859.53787 0.53786886 4639 Q9NTZ6 RBM12 RNA-binding protein 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57.549 56.452 2 0.018462 62294 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.42 47.457 640670000 241170000 68878000 18792000 15399000 17695000 21788000 24127000 22834000 16368000 26587000 24271000 26161000 21791000 32974000 61836000 58638 4639 52705 494952;494953;494954;494955;494956;494957;494958;494959;494960;494961;494962;494963;494964;494965;494966 392469;392470;392471;392472;392473;392474;392475;392476;392477 392471 2 VTLLNAPTK Unmodified 955.57023 0.57023162 3496 Q8TD19 NEK9 Serine/threonine-protein kinase Nek9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48.341 47.285 2 0.0093821 64032 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.476 59.302 257420000 49690000 121730000 3334600 4036200 3187700 8299400 5816000 3378600 3927800 6975900 10936000 10243000 7312100 5554100 12999000 58639 3496 52706 494967;494968;494969;494970;494971;494972;494973;494974;494975;494976;494977;494978;494979;494980;494981 392478;392479;392480;392481;392482;392483;392484;392485;392486;392487;392488;392489;392490;392491 392484 14 VTLMQLPTR Unmodified 1057.5954 0.59540051 1776 P55884 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 70.21 70.295 2 0.0032698 80459 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 93.162 77.792 77170000 0 0 0 3557900 3105500 0 5597500 4312400 3321300 3499500 8282200 10746000 6060400 8291800 20396000 58640 1776 52707 494982;494983;494984;494985;494986;494987;494988;494989;494990;494991;494992 392492;392493;392494;392495;392496;392497;392498;392499;392500;392501;392502;392503;392504 392502 13 VTLMQLPTRQEIR Oxidation (M) 1599.8767 0.87666075 1776 P55884 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 56.195 56.407 3 0.001402 63751 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 51.211 37.181 74629000 0 0 0 0 5629100 5522400 0 8411500 0 14752000 10767000 12186000 0 0 17362000 58641 1776 52708 494993;494994;494995;494996;494997;494998;494999 392505;392506;392507 392505 2902 2 VTLMQLPTRQEIR Unmodified 1583.8817 0.88174613 1776 P55884 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 70.146 70.393 3 0.0031262 80287 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.548 51.944 46941000 0 0 0 0 0 0 0 5093700 3915200 0 0 7594700 4174100 4914800 21249000 58642 1776 52708 495000;495001;495002;495003;495004;495005 392508;392509;392510;392511;392512 392508 3 VTLNTLQAWSK Unmodified 1259.6874 0.68738664 2235 Q13112 CHAF1B Chromatin assembly factor 1 subunit B yes yes 0 0 0 By matching By MS/MS By matching By matching 10 0 4 1 1 1 1 74.25 74.462 2 0.034722 85827 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 67.334 35.912 14624000 0 0 0 0 0 0 1822500 0 0 2816300 0 4983200 0 0 5001900 58643 2235 52709 495006;495007;495008;495009 392513 392513 0 VTLQEMLK Unmodified 960.5314 0.53140327 3532 Q8WTW3 COG1 Conserved oligomeric Golgi complex subunit 1 yes yes 0 0 0 By MS/MS 2 0 1 1 77.169 72.331 2 0.01212 90224 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.64 27.228 49587000 0 49587000 0 0 0 0 0 0 0 0 0 0 0 0 0 58644 3532 52710 495010 392514 392514 1 VTLQIPASSLDANRK Unmodified 1611.8944 0.8944193 4576 Q9NQT8 KIF13B Kinesin-like protein KIF13B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 66.333 66.219 3 0.0027486 76516 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 25.024 21.084 14734000 0 0 0 4405200 2178400 0 0 0 0 0 0 0 0 4230300 3919600 58645 4576 52711 495011;495012;495013;495014 392515;392516 392515 2 VTLSFPSTLQTGTGTLK Unmodified 1749.9513 0.95126548 1771 P55786;A6NEC2 NPEPPS;NPEPPSL1 Puromycin-sensitive aminopeptidase;Puromycin-sensitive aminopeptidase-like protein yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.42 3.07 2 2 15 4 2 1 1 1 1 1 2 1 1 2 2 83.777 82.968 2;3 5.9841E-25 95718 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 148.13 136.07 534770000 0 319480000 0 7518000 3987300 4857300 0 7306700 2787100 5138900 32051000 17708000 5036700 21796000 107110000 58646 1771 52712 495015;495016;495017;495018;495019;495020;495021;495022;495023;495024;495025;495026;495027;495028;495029;495030;495031;495032;495033 392517;392518;392519;392520;392521;392522;392523;392524;392525;392526;392527;392528;392529;392530;392531;392532 392521 15 VTLSTDK Unmodified 762.41233 0.41233399 1441 P41252 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 15.124 14.343 2 0.02234 17703 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.43 32.119 864640000 50019000 610730000 8832100 13183000 11321000 22236000 14004000 0 10465000 1385200 40237000 481870 16069000 20089000 45584000 58647 1441 52713 495034;495035;495036;495037;495038;495039;495040;495041;495042;495043;495044;495045;495046;495047;495048 392533;392534;392535;392536;392537;392538 392535 6 VTLSVLSR Unmodified 873.52837 0.5283668 172 O00625 PIR Pirin yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 58.614 58.998 2 0.0067966 66297 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.492 52.677 35292000 0 0 0 0 0 0 0 0 0 0 8711000 5575800 1717700 5256200 14032000 58648 172 52714 495049;495050;495051;495052;495053 392539 392539 1 VTLTLPVLNAAR Unmodified 1266.766 0.76597131 641 O95336 PGLS 6-phosphogluconolactonase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 86.188 86.256 2 0.00043318 99607 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 102.62 87.414 68927000 0 0 0 1747300 1304300 7975600 3169700 3610600 2915200 6956800 6076600 8271800 2877500 4737700 19284000 58649 641 52715 495054;495055;495056;495057;495058;495059;495060;495061;495062;495063;495064;495065 392540;392541;392542;392543;392544;392545;392546;392547 392542 7 VTLTSEEEAR Unmodified 1133.5564 0.55643205 719 P00338 LDHA L-lactate dehydrogenase A chain yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28.631 28.252 2 7.202E-08 30444 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 152.34 87.089 2107300000 0 107370000 2109800 39033000 24548000 27293000 24715000 23526000 20650000 33511000 420830000 196690000 34838000 222590000 929580000 58650 719 52716 495066;495067;495068;495069;495070;495071;495072;495073;495074;495075;495076;495077;495078;495079 392548;392549;392550;392551;392552;392553;392554;392555;392556 392556 8 VTLTSEEEARLK Unmodified 1374.7355 0.73545904 719 P00338 LDHA L-lactate dehydrogenase A chain yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2.62 1.68 1 105 40 7 15 92 39 2 1 2 2 70.868 66.694 2;3 3.4594E-15 56447 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 146.16 116.86 24183000000 1309300000 14534000000 7452400000 0 0 0 0 0 0 0 213460000 19966000 0 122530000 531550000 58651 719 52717 495080;495081;495082;495083;495084;495085;495086;495087;495088;495089;495090;495091;495092;495093;495094;495095;495096;495097;495098;495099;495100;495101;495102;495103;495104;495105;495106;495107;495108;495109;495110;495111;495112;495113;495114;495115;495116;495117;495118;495119;495120;495121;495122;495123;495124;495125;495126;495127;495128;495129;495130;495131;495132;495133;495134;495135;495136;495137;495138;495139;495140;495141;495142;495143;495144;495145;495146;495147;495148;495149;495150;495151;495152;495153;495154;495155;495156;495157;495158;495159;495160;495161;495162;495163;495164;495165;495166;495167;495168;495169;495170;495171;495172;495173;495174;495175;495176;495177;495178;495179;495180;495181;495182;495183;495184;495185;495186;495187;495188;495189;495190;495191;495192;495193;495194;495195;495196;495197;495198;495199;495200;495201;495202;495203;495204;495205;495206;495207;495208;495209;495210;495211;495212;495213;495214;495215;495216;495217;495218;495219;495220;495221;495222;495223;495224;495225;495226;495227;495228;495229;495230;495231;495232 392557;392558;392559;392560;392561;392562;392563;392564;392565;392566;392567;392568;392569;392570;392571;392572;392573;392574;392575;392576;392577;392578;392579;392580;392581;392582;392583;392584;392585;392586;392587;392588;392589;392590;392591;392592;392593;392594;392595;392596;392597;392598;392599;392600;392601;392602;392603;392604;392605;392606;392607;392608;392609;392610;392611;392612;392613;392614;392615;392616;392617;392618;392619;392620;392621;392622;392623;392624;392625;392626;392627;392628;392629;392630;392631;392632;392633;392634;392635;392636;392637;392638;392639;392640;392641;392642;392643;392644;392645;392646;392647;392648;392649;392650;392651;392652;392653;392654;392655;392656;392657;392658;392659;392660;392661;392662;392663;392664;392665;392666;392667;392668;392669;392670;392671;392672;392673;392674;392675;392676;392677;392678;392679;392680;392681;392682;392683;392684;392685;392686;392687;392688;392689;392690;392691;392692;392693;392694;392695;392696;392697;392698;392699;392700;392701;392702;392703;392704;392705;392706;392707;392708;392709;392710;392711;392712;392713;392714;392715;392716;392717;392718;392719;392720;392721;392722;392723;392724;392725;392726;392727;392728;392729;392730;392731;392732;392733;392734;392735;392736;392737;392738;392739;392740;392741;392742;392743;392744;392745;392746;392747;392748;392749;392750;392751;392752;392753;392754;392755;392756;392757;392758;392759;392760;392761;392762;392763;392764;392765;392766;392767;392768;392769;392770;392771;392772;392773;392774;392775;392776;392777;392778;392779;392780;392781;392782;392783;392784;392785;392786;392787;392788;392789;392790;392791;392792;392793;392794;392795;392796;392797;392798;392799;392800 392643 236 VTLVVGASQDIIPQLK Unmodified 1679.9822 0.98217168 1131 P21964 COMT Catechol O-methyltransferase yes yes 0 0 0 By MS/MS 2 0 1 1 92.806 87.895 2 0.0037608 109238 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.132 50.754 10242000 0 10242000 0 0 0 0 0 0 0 0 0 0 0 0 0 58652 1131 52718 495233 392801 392801 1 VTLYNTDQDGSDSPR Unmodified 1666.7435 0.74345755 5062 Q9UPW0 FOXJ3 Forkhead box protein J3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.695 39.874 2 4.7524E-27 44041 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 164.04 160.51 109520000 0 0 0 6019100 4589800 7960700 6586800 7010100 6340900 12113000 11875000 10789000 9902300 10781000 15555000 58653 5062 52719 495234;495235;495236;495237;495238;495239;495240;495241;495242;495243;495244;495245 392802;392803;392804;392805;392806;392807;392808;392809;392810;392811;392812;392813 392807 12 VTMEEASR Unmodified 921.42258 0.4225811 1577 P49585 PCYT1A Choline-phosphate cytidylyltransferase A yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 14.715 14.967 2 0.0089203 14367 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 84.568 68.936 102750000 0 0 0 0 0 11456000 0 14446000 0 20352000 32125000 24374000 0 0 0 58654 1577 52720 495246;495247;495248;495249;495250 392814;392815;392816;392817 392814 3 VTMEEASR Oxidation (M) 937.4175 0.41749572 1577 P49585 PCYT1A Choline-phosphate cytidylyltransferase A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 5.8267 6.0026 2 0.020271 3843 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 96.253 65.535 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58655 1577 52720 495251;495252;495253;495254;495255 392818;392819;392820;392821;392822 392822 2528 5 VTMINAIPVASLDPIK Oxidation (M) 1696.9433 0.94334333 5231 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 87.772 87.122 2 5.4677E-11 100950 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 96.745 90.2 318290000 0 190860000 3263600 2024200 6462700 13282000 5845100 9051900 7492900 17196000 12935000 12204000 9314800 7935800 20418000 58656 5231 52721 495256;495257;495258;495259;495260;495261;495262;495263;495264;495265;495266;495267;495268;495269;495270 392823;392824;392825;392826;392827;392828;392829;392830;392831;392832;392833;392834;392835;392836;392837 392825 6634 15 VTMINAIPVASLDPIK Unmodified 1680.9484 0.94842871 5231 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.42 3.66 3 1 8 1 2 1 1 1 1 1 1 1 1 1 93.332 91.869 2 9.0317E-07 114286 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.53 118.99 480450000 11162000 450330000 1423700 0 0 1010300 0 1202500 845160 2482700 1571200 1533100 0 1358100 7535600 58657 5231 52721 495271;495272;495273;495274;495275;495276;495277;495278;495279;495280;495281;495282 392838;392839;392840;392841;392842;392843 392839 6 VTMNDFDYLK Unmodified 1244.5747 0.57472465 1305 P31751 AKT2 RAC-beta serine/threonine-protein kinase yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 79.078 75.012 2 0.00012191 93312 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.15 82.596 190290000 0 190290000 0 0 0 0 0 0 0 0 0 0 0 0 0 58658 1305 52722 495283;495284 392844 392844 1 VTMNDFDYLK Oxidation (M) 1260.5696 0.56963927 1305 P31751 AKT2 RAC-beta serine/threonine-protein kinase yes yes 0 1 0 By MS/MS 2 0 1 1 66.238 60.32 2 0.026331 77202 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 63.283 42.658 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58659 1305 52722 495285 392845 392845 1 VTMPVAYK Unmodified 907.48372 0.48372479 1146 P22735 TGM1 Protein-glutamine gamma-glutamyltransferase K yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 48.606 48.468 2 0.029218 55388 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 56.27 40.899 35014000 0 0 0 27545000 0 0 0 0 0 0 0 0 7469200 0 0 58660 1146 52723 495286;495287 392846 392846 1 VTMQNLNDR Oxidation (M) 1105.5186 0.51860675 56;70;72;57;101;102 CON__P13645;P13645;CON__Q148H6;CON__Q7Z3Y7;Q7Z3Y7;CON__P02535-1;CON__P02533;P02533;CON__P08779;P08779;CON__Q9Z2K1;CON__Q3ZAW8;CON__Q7Z3Z0;CON__Q7Z3Y8;Q7Z3Z0;Q7Z3Y8;CON__Q7Z3Y9;Q7Z3Y9 KRT10;KRT28;KRT14;KRT16;KRT25;KRT27;KRT26 Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 28;Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16;Keratin, type I cytoskeletal 25;Keratin, type I cytoskeletal 27;Keratin, type I cytoskeletal 26 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 149 12 14 11 13 19 10 13 10 14 16 12 5 20.852 21.024 2 0.0019162 12983 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 124.98 87.425 + 34698000000 0 0 0 9425100000 2037200000 2538200000 2239600000 2587800000 1588600000 3062400000 1712200000 3818200000 3688700000 1231600000 768540000 58661 72;57;56;70;101;102 52724 495288;495289;495290;495291;495292;495293;495294;495295;495296;495297;495298;495299;495300;495301;495302;495303;495304;495305;495306;495307;495308;495309;495310;495311;495312;495313;495314;495315;495316;495317;495318;495319;495320;495321;495322;495323;495324;495325;495326;495327;495328;495329;495330;495331;495332;495333;495334;495335;495336;495337;495338;495339;495340;495341;495342;495343;495344;495345;495346;495347;495348;495349;495350;495351;495352;495353;495354;495355;495356;495357;495358;495359;495360;495361;495362;495363;495364;495365;495366;495367;495368;495369;495370;495371;495372;495373;495374;495375;495376;495377;495378;495379;495380;495381;495382;495383;495384;495385;495386;495387;495388;495389;495390;495391;495392;495393;495394;495395;495396;495397;495398;495399;495400;495401;495402;495403;495404;495405;495406;495407;495408;495409;495410;495411;495412;495413;495414;495415;495416;495417;495418;495419;495420;495421;495422;495423;495424;495425;495426;495427;495428;495429;495430;495431;495432;495433;495434;495435;495436 392847;392848;392849;392850;392851;392852;392853;392854;392855;392856;392857;392858;392859;392860;392861;392862;392863;392864;392865;392866;392867;392868;392869;392870;392871;392872;392873;392874;392875;392876;392877;392878;392879;392880;392881;392882;392883;392884;392885;392886;392887;392888;392889;392890;392891;392892;392893;392894;392895;392896;392897;392898;392899;392900;392901;392902;392903;392904;392905;392906;392907;392908;392909;392910;392911;392912;392913;392914;392915;392916;392917;392918;392919;392920;392921;392922;392923;392924;392925;392926;392927;392928;392929;392930;392931;392932;392933;392934;392935;392936;392937;392938;392939;392940;392941;392942;392943;392944;392945;392946;392947;392948;392949;392950;392951;392952;392953;392954;392955;392956;392957;392958;392959;392960;392961;392962;392963;392964;392965;392966;392967;392968;392969;392970;392971;392972;392973;392974;392975;392976;392977;392978;392979;392980;392981;392982;392983;392984;392985;392986;392987;392988;392989;392990;392991;392992;392993;392994;392995;392996;392997;392998;392999;393000;393001;393002;393003;393004;393005;393006;393007;393008;393009;393010;393011;393012;393013;393014;393015;393016;393017;393018;393019;393020;393021;393022;393023;393024;393025;393026;393027;393028;393029;393030;393031 392954 61;62 182 VTMQNLNDR Unmodified 1089.5237 0.52369213 56;70;72;57;101;102 CON__P13645;P13645;CON__Q148H6;CON__Q7Z3Y7;Q7Z3Y7;CON__P02535-1;CON__P02533;P02533;CON__P08779;P08779;CON__Q9Z2K1;CON__Q3ZAW8;CON__Q7Z3Z0;CON__Q7Z3Y8;Q7Z3Z0;Q7Z3Y8;CON__Q7Z3Y9;Q7Z3Y9 KRT10;KRT28;KRT14;KRT16;KRT25;KRT27;KRT26 Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 28;Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16;Keratin, type I cytoskeletal 25;Keratin, type I cytoskeletal 27;Keratin, type I cytoskeletal 26 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 3 1 2 1 2 1 1 1 1 2 1 2 30.35 30.584 2 5.0835E-10 33348 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 164.53 89.32 + 78906000000 0 0 0 15532000000 4466800000 5234100000 4211700000 7322100000 3143300000 7905400000 5565100000 8786500000 8514200000 4669800000 3554800000 58662 72;57;56;70;101;102 52724 495437;495438;495439;495440;495441;495442;495443;495444;495445;495446;495447;495448;495449;495450;495451;495452;495453;495454 393032;393033;393034;393035;393036;393037;393038;393039;393040;393041;393042;393043;393044;393045;393046;393047;393048;393049;393050;393051;393052;393053;393054;393055 393053 24 VTMQNLNDRLASYLDK Oxidation (M) 1895.9411 0.9411115 56;70;72 CON__P13645;P13645;CON__P02533;P02533;CON__P08779;P08779 KRT10;KRT14;KRT16 Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16 no no 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.68 1.57 1 24 1 2 2 2 2 2 2 2 2 2 2 2 2 72.4 72.14 2;3 3.9514E-45 83078 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 150.34 136.75 + 4015100000 23594000 0 0 413460000 83870000 296660000 127570000 662980000 256030000 503490000 335430000 480200000 320110000 255750000 255980000 58663 72;56;70 52725 495455;495456;495457;495458;495459;495460;495461;495462;495463;495464;495465;495466;495467;495468;495469;495470;495471;495472;495473;495474;495475;495476;495477;495478;495479 393056;393057;393058;393059;393060;393061;393062;393063;393064;393065;393066;393067;393068;393069;393070;393071;393072;393073;393074;393075;393076;393077;393078;393079;393080;393081 393068 61 22 VTMQNLNDRLASYLDK Unmodified 1879.9462 0.94619688 56;70;72 CON__P13645;P13645;CON__P02533;P02533;CON__P08779;P08779 KRT10;KRT14;KRT16 Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 79.678 79.766 3 0.00034959 91890 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.445 48.897 + 68801000 0 0 0 6359000 0 0 0 8857600 4816300 8806600 3498900 5008200 0 0 31455000 58664 72;56;70 52725 495480;495481;495482;495483;495484;495485;495486 393082;393083;393084 393082 3 VTNDGEIWR Unmodified 1088.5251 0.52507234 2933 Q6P3X3 TTC27 Tetratricopeptide repeat protein 27 yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 42.417 42.676 2 0.0080109 47641 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 70.856 28.964 36698000 0 0 0 0 2720700 6019100 0 0 0 5308700 0 6374500 4120200 3329400 8825200 58665 2933 52726 495487;495488;495489;495490;495491;495492;495493 393085;393086 393085 2 VTNEDFK Unmodified 851.4025 0.40249759 1875 P62191 PSMC1 26S protease regulatory subunit 4 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 15.625 12.192 2 0.021131 16025 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.61 61.851 311090000 0 311090000 0 0 0 0 0 0 0 0 0 0 0 0 0 58666 1875 52727 495494;495495 393087 393087 1 VTNEDFKK Unmodified 979.49746 0.4974606 1875 P62191 PSMC1 26S protease regulatory subunit 4 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 11.752 8.2153 2 0.01272 11395 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.11 89.687 318810000 9052300 309760000 0 0 0 0 0 0 0 0 0 0 0 0 0 58667 1875 52728 495496;495497;495498 393088;393089 393088 1 VTNEFVHINNLK Unmodified 1426.7569 0.75686319 176 O00743 PPP6C Serine/threonine-protein phosphatase 6 catalytic subunit;Serine/threonine-protein phosphatase 6 catalytic subunit, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.71 3.94 7 10 3 2 2 1 1 1 1 2 2 2 62.377 59.971 2;3 1.7766E-14 79246 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 143.5 124.26 1625300000 927850000 176220000 294830000 0 0 0 0 23697000 0 21475000 30319000 19232000 29944000 35742000 65975000 58668 176 52729 495499;495500;495501;495502;495503;495504;495505;495506;495507;495508;495509;495510;495511;495512;495513;495514;495515 393090;393091;393092;393093;393094;393095;393096;393097;393098;393099;393100;393101;393102;393103;393104 393093 11 VTNGAFTGEISPGMIK Unmodified 1620.8181 0.81814282 1808 P60174 TPI1 Triosephosphate isomerase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6 4.01 1 8 1 10 3 5 2 1 1 1 1 1 1 1 1 1 1 78.59 76.994 2;3 2.742E-66 92972 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 243.37 233.68 18849000000 418240000 17269000000 174540000 28737000 4820900 0 4816100 9394800 0 9976300 130990000 162790000 6262000 96281000 533060000 58669 1808 52730 495516;495517;495518;495519;495520;495521;495522;495523;495524;495525;495526;495527;495528;495529;495530;495531;495532;495533;495534;495535 393105;393106;393107;393108;393109;393110;393111;393112;393113;393114;393115;393116;393117;393118;393119;393120;393121;393122;393123;393124;393125;393126 393107 21 VTNGAFTGEISPGMIK Oxidation (M) 1636.8131 0.81305744 1808 P60174 TPI1 Triosephosphate isomerase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 5.64 3.92 1 15 4 16 4 11 5 2 1 1 1 2 1 2 2 2 2 69.603 67.724 2;3 1.1724E-113 75745 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 202.72 184.86 8902000000 318500000 7717400000 147010000 19630000 2953900 3270400 3224500 7249200 0 3415200 140330000 155990000 0 89206000 293860000 58670 1808 52730 495536;495537;495538;495539;495540;495541;495542;495543;495544;495545;495546;495547;495548;495549;495550;495551;495552;495553;495554;495555;495556;495557;495558;495559;495560;495561;495562;495563;495564;495565;495566;495567;495568;495569;495570;495571 393127;393128;393129;393130;393131;393132;393133;393134;393135;393136;393137;393138;393139;393140;393141;393142;393143;393144;393145;393146;393147;393148;393149;393150;393151;393152;393153;393154;393155;393156;393157;393158;393159;393160 393137 2928 32 VTNIGNQQIDK Unmodified 1228.6412 0.64116473 2932 Q6P3W7 SCYL2 SCY1-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.739 27.937 2 4.121E-21 30015 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 169.65 109.85 556590000 0 0 0 33840000 42834000 41584000 45563000 38738000 34097000 48841000 55318000 54328000 47232000 50110000 64107000 58671 2932 52731 495572;495573;495574;495575;495576;495577;495578;495579;495580;495581;495582;495583 393161;393162;393163;393164;393165;393166;393167;393168;393169;393170;393171;393172;393173;393174 393167 13 VTNINDRSAPILEK Unmodified 1568.8522 0.85222014 3528 Q8TF74 WIPF2 WAS/WASL-interacting protein family member 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 51.829 45.84 3 0.012512 57719 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 55.724 42.587 25042000 8136200 0 16906000 0 0 0 0 0 0 0 0 0 0 0 0 58672 3528 52732 495584;495585 393175 393175 0 VTNLLMLK Unmodified 930.55722 0.55722409 1208;687 O95758;P26599 PTBP3;PTBP1 Polypyrimidine tract-binding protein 3;Polypyrimidine tract-binding protein 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 6 24 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 73.459 72.476 1;2 0.0043294 83215 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 131.04 0 3223200000 1198300000 727710000 61550000 63432000 52116000 87791000 64883000 74889000 55099000 120280000 117970000 102250000 77726000 125070000 294120000 58673 687;1208 52733 495586;495587;495588;495589;495590;495591;495592;495593;495594;495595;495596;495597;495598;495599;495600;495601;495602;495603;495604;495605;495606;495607;495608;495609;495610;495611;495612;495613;495614;495615 393176;393177;393178;393179;393180;393181;393182;393183;393184;393185;393186;393187;393188;393189;393190;393191;393192;393193;393194;393195;393196;393197;393198;393199;393200;393201 393183 23 VTNLSEDTR Unmodified 1033.504 0.50400254 546 O75821 EIF3G Eukaryotic translation initiation factor 3 subunit G yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 17.176 17.641 2 0.0060523 16768 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.1 55.54 51281000 0 0 0 0 0 0 0 0 0 0 0 18730000 0 10670000 21881000 58674 546 52734 495616;495617;495618 393202;393203 393202 2 VTNMEVALDK Oxidation (M) 1134.5591 0.55907458 2747 Q5M9N0 CCDC158 Coiled-coil domain-containing protein 158 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 54.687 54.763 2 0.010252 61389 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 50.04 28.74 125700000 0 0 0 9242400 15146000 0 21103000 0 15506000 0 0 29648000 0 15639000 19414000 58675 2747 52735 495619;495620;495621;495622;495623;495624;495625 393204;393205;393206 393205 4384 3 VTNRDIICQIAYAR Unmodified 1691.8777 0.87772338 1508 P46777 RPL5 60S ribosomal protein L5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 69.741 69.999 3 0.00072088 79566 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 47.037 39.446 14174000 0 0 0 0 0 0 0 0 0 0 0 0 2533500 4655800 6984600 58676 1508 52736 495626;495627;495628 393207;393208;393209 393208 3 VTNSTELQHQLDK Unmodified 1511.758 0.7579854 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 33.206 32.328 3 0.00011999 40238 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 96.23 84.538 150590000 9774600 13423000 9739000 5202900 4185200 0 7818100 7033800 4418300 6519700 17347000 18341000 6906400 11990000 27890000 58677 2495 52737 495629;495630;495631;495632;495633;495634;495635;495636;495637;495638;495639;495640;495641;495642;495643 393210;393211;393212;393213;393214;393215;393216;393217;393218;393219;393220;393221 393215 12 VTNTTPWEHPYPDLPSR Unmodified 2008.9643 0.96428978 646 O95361;Q309B1 TRIM16;TRIM16L Tripartite motif-containing protein 16;Tripartite motif-containing protein 16-like protein yes no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 70.846 70.962 3 0.0042581 81615 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 37.624 33.783 70438000 0 0 0 2469300 0 8898400 4212300 5241800 0 7277400 7937700 7480800 5942100 6009100 14969000 58678 646 52738 495644;495645;495646;495647;495648;495649;495650;495651;495652;495653 393222;393223;393224 393223 3 VTNYIFDSLR Unmodified 1226.6295 0.62953741 3485 Q8TC07 TBC1D15 TBC1 domain family member 15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.584 78.674 2 0.0014338 90499 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 103.7 78.777 184350000 0 0 0 7698200 0 19978000 11953000 14117000 14737000 18637000 17651000 15359000 16161000 13209000 34852000 58679 3485 52739 495654;495655;495656;495657;495658;495659;495660;495661;495662;495663;495664;495665 393225;393226;393227;393228;393229;393230;393231;393232;393233;393234;393235;393236;393237 393229 12 VTPAAANYR Unmodified 961.49813 0.49812931 186 O14545 TRAFD1 TRAF-type zinc finger domain-containing protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 21.745 22.008 2 0.03718 22905 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 45.382 16.005 96947000 0 0 0 0 10602000 0 12634000 0 0 0 0 27691000 0 13939000 32080000 58680 186 52740 495666;495667;495668;495669;495670 393238 393238 1 VTPDIEESLLEPENEK Unmodified 1840.8942 0.89420411 2377 Q14151 SAFB2 Scaffold attachment factor B2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 2 2 1 1 1 1 1 1 1 1 1 1 1 79.595 78.024 2 2.4074E-27 90289 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 156.69 138.88 451610000 33501000 249030000 0 6785300 11504000 0 11745000 11782000 10282000 18101000 15602000 20454000 13890000 16189000 32745000 58681 2377 52741 495671;495672;495673;495674;495675;495676;495677;495678;495679;495680;495681;495682;495683;495684;495685 393239;393240;393241;393242;393243;393244;393245;393246;393247;393248;393249;393250;393251;393252;393253 393243 15 VTPDLKPTEASSSAFR Unmodified 1704.8683 0.86826413 2935 Q6P4R8 NFRKB Nuclear factor related to kappa-B-binding protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 51.899 52.209 3 0.0085292 59135 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 35.492 23.326 71811000 0 0 0 0 0 15366000 0 8640300 9618900 11861000 0 9153600 0 6341900 10829000 58682 2935 52742 495686;495687;495688;495689;495690;495691;495692 393254;393255;393256 393254 1 VTPDTDWAR Unmodified 1059.4985 0.49852324 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.641 40.819 2 0.0031541 45316 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 92.439 61.827 5629500000 0 0 0 177590000 300590000 257720000 1266200000 1286100000 1062600000 246990000 404820000 527410000 14923000 24403000 60229000 58683 1714 52743 495693;495694;495695;495696;495697;495698;495699;495700;495701;495702;495703;495704 393257;393258;393259;393260;393261;393262;393263;393264;393265;393266;393267;393268;393269;393270 393263 14 VTPENAGQWKPDELQVLEK Unmodified 2180.1113 0.11134795 387 O60244 MED14 Mediator of RNA polymerase II transcription subunit 14 yes yes 0 0 1 By MS/MS 2 0 1 1 81.809 77.104 3 0.0086732 95960 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 30.969 21.495 26710000 0 26710000 0 0 0 0 0 0 0 0 0 0 0 0 0 58684 387 52744 495705 393271 393271 1 VTPEPGAGPTQGLLR Unmodified 1491.8045 0.80454166 3208 Q86YP4 GATAD2A Transcriptional repressor p66-alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.166 61.268 2 0.018845 69091 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.044 36.825 190260000 0 0 0 11926000 12656000 13666000 11502000 16220000 9754400 22075000 16900000 19972000 18178000 14220000 23191000 58685 3208 52745 495706;495707;495708;495709;495710;495711;495712;495713;495714;495715;495716;495717 393272;393273 393272 2 VTPLGAGQDVGR Unmodified 1168.62 0.62003536 2789 Q5TA45 CPSF3L Integrator complex subunit 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 38.652 38.747 2 0.012508 43638 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 47.844 30.458 60272000 0 0 0 3386100 4037900 5526900 5349000 5138900 4607100 6553400 0 11448000 8949300 5274700 0 58686 2789 52746 495718;495719;495720;495721;495722;495723;495724;495725;495726;495727 393274;393275;393276;393277;393278 393277 5 VTPPEGYEVVTVFPK Unmodified 1660.8712 0.87122424 119 O00151 PDLIM1 PDZ and LIM domain protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 2 22 1 1 2 2 2 2 1 2 2 2 2 2 2 1 82.857 82.6 2;3 1.8627E-30 102238 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 128.85 112.96 575410000 0 121170000 5853600 9166400 14107000 18256000 20600000 17204000 13883000 26735000 63549000 79415000 23179000 56595000 105690000 58687 119 52747 495728;495729;495730;495731;495732;495733;495734;495735;495736;495737;495738;495739;495740;495741;495742;495743;495744;495745;495746;495747;495748;495749;495750;495751 393279;393280;393281;393282;393283;393284;393285 393281 5 VTPQSDGSSSK Unmodified 1091.5095 0.50948185 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 0 0 By MS/MS By MS/MS 1 0 3 2 1 106.45 110.26 2 0.003433 92524 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 107.79 71.393 264690000 254990000 9697200 0 0 0 0 0 0 0 0 0 0 0 0 0 58688 1337 52748 495752;495753;495754 393286;393287;393288 393287 2 VTPTRTEIIILATR Unmodified 1582.9406 0.94064121 1156 P23396 RPS3 40S ribosomal protein S3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.585 74.65 3 3.0951E-13 86066 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 98.943 54.487 253290000 0 0 0 5377000 8095600 18541000 13615000 15841000 18515000 20988000 19303000 28003000 18788000 28304000 57918000 58689 1156 52749 495755;495756;495757;495758;495759;495760;495761;495762;495763;495764;495765;495766 393289;393290;393291;393292;393293;393294;393295;393296;393297;393298;393299;393300;393301 393296 12 VTPVEVMPVFPDFK Oxidation (M) 1619.8269 0.82691659 3366 Q8N7H5 PAF1 RNA polymerase II-associated factor 1 homolog yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 86.129 86.197 2 9.3965E-43 100186 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 155.48 141.25 311890000 0 0 0 8299800 15633000 19749000 15199000 18854000 16003000 35541000 35290000 43114000 31418000 30979000 41813000 58690 3366 52750 495767;495768;495769;495770;495771;495772;495773;495774;495775;495776;495777;495778 393302;393303;393304;393305;393306;393307;393308;393309;393310;393311;393312;393313 393311 4944 7 VTPVEVMPVFPDFK Unmodified 1603.832 0.83200197 3366 Q8N7H5 PAF1 RNA polymerase II-associated factor 1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 92.613 92.72 2 2.1173E-05 107496 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.667 69.4 72648000 0 0 0 0 2537300 3062700 1932800 4047000 2845800 6834000 6403800 10110000 3984500 7484000 23406000 58691 3366 52750 495779;495780;495781;495782;495783;495784;495785;495786;495787;495788;495789 393314;393315;393316;393317;393318;393319;393320;393321;393322;393323;393324;393325;393326;393327;393328 393320 13 VTQAIQSFCLEK Unmodified 1422.7177 0.71770049 1614 P49959 MRE11A Double-strand break repair protein MRE11A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 66.523 65.856 2 6.0121E-08 74451 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 139.86 116.54 645060000 0 307900000 0 14364000 10798000 27829000 23986000 11801000 18665000 33751000 29993000 47038000 26946000 24010000 67979000 58692 1614 52751 495790;495791;495792;495793;495794;495795;495796;495797;495798;495799;495800;495801;495802;495803 393329;393330;393331;393332;393333;393334;393335;393336;393337;393338;393339;393340;393341;393342;393343;393344 393338 16 VTQDATPGSALDK Unmodified 1301.6463 0.64630969 2057 Q01581 HMGCS1 Hydroxymethylglutaryl-CoA synthase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 29.472 27.935 2 5.8179E-10 34935 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 143 102.01 85628000 7109500 41508000 0 6606500 0 0 0 0 0 0 0 0 3066000 7586300 19751000 58693 2057 52752 495804;495805;495806;495807;495808;495809;495810;495811;495812 393345;393346;393347;393348;393349 393346 5 VTQDELK Unmodified 831.4338 0.43379771 1085 P19338 NCL Nucleolin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 12.84 13.019 2 0.024481 11985 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 97.068 27.635 342880000 0 0 0 0 22479000 22339000 31757000 29195000 25155000 31244000 44767000 53910000 0 28398000 53634000 58694 1085 52753 495813;495814;495815;495816;495817;495818;495819;495820;495821;495822 393350;393351;393352;393353;393354 393352 5 VTQECAEYR Unmodified 1154.5026 0.50262234 3666 Q92817 EVPL Envoplakin yes yes 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 14.978 15.263 2 0.0037123 14968 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 101.54 85.398 12527000 0 0 0 7766300 0 0 0 0 0 0 2877800 0 0 0 1883200 58695 3666 52754 495823;495824;495825 393355 393355 1 VTQEEIK Unmodified 845.44945 0.44944778 151 O00422 SAP18 Histone deacetylase complex subunit SAP18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 11.517 11.664 2 0.025135 9639 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 81.381 18.666 87751000 0 0 0 5335200 4814500 6363800 5648500 6669200 6371100 6057300 8525000 11400000 8194400 7015700 11357000 58696 151 52755 495826;495827;495828;495829;495830;495831;495832;495833;495834;495835;495836;495837 393356;393357;393358 393357 3 VTQEIVTER Unmodified 1073.5717 0.57168818 2369 Q14126 DSG2 Desmoglein-2 yes yes 0 0 0 By MS/MS 2 0 1 1 33.067 28.533 2 0.044244 37226 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 59.35 19.247 7430000 0 7430000 0 0 0 0 0 0 0 0 0 0 0 0 0 58697 2369 52756 495838 393359 393359 1 VTQIGQK Unmodified 772.4443 0.44430282 4740 Q9NYC9 DNAH9 Dynein heavy chain 9, axonemal yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 8.8901 5.4434 2 0.030056 7993 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.885 2.7448 3149200000 46443000 3102800000 0 0 0 0 0 0 0 0 0 0 0 0 0 58698 4740 52757 495839;495840 393360 393360 1 VTQLDLDGPK Unmodified 1084.5764 0.57643921 2292 Q13442 PDAP1 28 kDa heat- and acid-stable phosphoprotein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.29 3.67 4 2 11 1 4 1 1 1 1 1 1 1 1 1 1 1 1 48.248 46.554 2 5.4183E-11 57238 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 176.6 127.51 1068100000 2215600 853270000 10087000 0 6163100 10997000 6717100 9190800 5594100 6738500 32151000 37865000 7515400 22693000 56899000 58699 2292 52758 495841;495842;495843;495844;495845;495846;495847;495848;495849;495850;495851;495852;495853;495854;495855;495856;495857 393361;393362;393363;393364;393365;393366;393367;393368;393369;393370;393371;393372;393373;393374;393375;393376;393377;393378;393379 393373 16 VTQLDPKEEEVSLQGINTRK Unmodified 2283.207 0.20703925 5296 Q9Y6W5 WASF2 Wiskott-Aldrich syndrome protein family member 2 yes yes 0 0 2 By MS/MS 2 0 1 1 66.122 62.37 3 2.8714E-05 77285 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 67.995 62.994 7007100 0 0 7007100 0 0 0 0 0 0 0 0 0 0 0 0 58700 5296 52759 495858 393380 393380 1 VTQLTDR Unmodified 831.44503 0.4450311 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.969 14.132 2 0.02357 12486 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 92.677 16.761 521200000 0 0 0 120700000 28966000 24398000 22213000 70894000 13012000 37253000 51211000 56586000 52930000 12945000 30095000 58701 1029 52760 495859;495860;495861;495862;495863;495864;495865;495866;495867;495868;495869;495870 393381;393382;393383;393384;393385;393386;393387;393388 393386 5 VTQLTDRWQR Unmodified 1301.684 0.6840326 1029 P15924 DSP Desmoplakin yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 39.132 39.261 3 0.012902 43705 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 79.974 62.607 344260000 0 0 0 48060000 8596500 16077000 17826000 94026000 17287000 21383000 23422000 38365000 45149000 14072000 0 58702 1029 52761 495871;495872;495873;495874;495875;495876;495877;495878;495879;495880;495881 393389;393390 393390 0 VTQLYVPASR Unmodified 1132.6241 0.6240581 2525 Q15386 UBE3C Ubiquitin-protein ligase E3C yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 49.411 49.175 2 0.0063431 55559 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 65.305 41.448 7924200 0 0 0 0 3462000 0 4462200 0 0 0 0 0 0 0 0 58703 2525 52762 495882;495883 393391;393392 393391 2 VTQNLANFAK Unmodified 1104.5928 0.59275797 2826 Q5VWQ8 DAB2IP Disabled homolog 2-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 47.511 47.707 2 0.0093306 53645 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 57.96 37.401 32551000 0 0 0 0 2349300 0 2890000 3598400 2163400 3823700 3967200 0 3984200 3962100 5812400 58704 2826 52763 495884;495885;495886;495887;495888;495889;495890;495891;495892 393393;393394;393395;393396;393397;393398 393393 6 VTQNLPMK Unmodified 929.50044 0.50043749 2645 Q1KMD3 HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 30.085 30.23 2 0.0050749 33121 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 108.24 45.524 582150000 0 0 0 34665000 39533000 39616000 31202000 34814000 26922000 60138000 62963000 95230000 90803000 66268000 0 58705 2645 52764 495893;495894;495895;495896;495897;495898;495899;495900;495901;495902;495903 393399;393400;393401;393402;393403;393404;393405;393406;393407 393399 8 VTQNLPMK Oxidation (M) 945.49535 0.49535211 2645 Q1KMD3 HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18.087 17.638 2 0.0059424 17745 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 84.244 39.552 274550000 2249000 16436000 0 16384000 20692000 21116000 19997000 13870000 15129000 23764000 17807000 39842000 26619000 16798000 23841000 58706 2645 52764 495904;495905;495906;495907;495908;495909;495910;495911;495912;495913;495914;495915;495916;495917 393408;393409;393410;393411;393412;393413;393414;393415 393412 4306 7 VTQQGLK Unmodified 772.4443 0.44430282 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.943 1 2 2 1 42.067 41.441 2 0.029403 7687 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 94.777 15.783 132080000 55809000 76269000 0 0 0 0 0 0 0 0 0 0 0 0 0 58707 1565 52765 495918;495919;495920 393416;393417;393418;393419 393418 4 VTQSDLYK Unmodified 952.48656 0.48656157 325 O43399 TPD52L2 Tumor protein D54 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.53 2.94 1 2 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 24.728 24.004 2 0.004651 24556 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 109.86 49.075 1602600000 683480 302830000 0 58563000 77225000 62189000 88798000 94925000 70753000 114390000 160800000 157150000 131560000 121210000 161500000 58708 325 52766 495921;495922;495923;495924;495925;495926;495927;495928;495929;495930;495931;495932;495933;495934;495935 393420;393421;393422;393423;393424;393425;393426;393427;393428;393429;393430;393431;393432;393433;393434;393435;393436;393437;393438;393439;393440;393441;393442;393443 393425 23 VTQSNFAVGYK Unmodified 1212.6139 0.61388734 1129 P21796 VDAC1 Voltage-dependent anion-selective channel protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 45.396 44.839 2 0.011753 50953 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 65.404 41.829 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58709 1129 52767 495936 393444 393444 1 VTQVDGNSPVR Unmodified 1170.5993 0.59929991 1538 P48444 ARCN1 Coatomer subunit delta yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 23.135 22.977 2 2.1451E-37 23152 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 183.67 139.23 589470000 0 14800000 0 25865000 28285000 45304000 33976000 0 19428000 75789000 49474000 66658000 59790000 65967000 104130000 58710 1538 52768 495937;495938;495939;495940;495941;495942;495943;495944;495945;495946;495947;495948 393445;393446;393447;393448;393449;393450;393451;393452 393449 8 VTQVDGNSPVRFSTETTFLVDK Unmodified 2439.2282 0.22816862 1538 P48444 ARCN1 Coatomer subunit delta yes yes 0 0 1 By MS/MS By matching By MS/MS 2 0 3 1 1 1 84.046 78.924 3 0.00070406 100575 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.453 39.753 34933000 10821000 20028000 4083500 0 0 0 0 0 0 0 0 0 0 0 0 58711 1538 52769 495949;495950;495951 393453;393454 393453 2 VTQYERDFER Unmodified 1341.6313 0.63132832 2323 Q13596 SNX1 Sorting nexin-1 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 33.015 33.025 3 0.0033485 36108 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 70.808 64.367 89627000 0 0 0 0 7824400 21483000 13741000 14920000 11535000 20123000 0 0 0 0 0 58712 2323 52770 495952;495953;495954;495955;495956;495957 393455;393456;393457 393457 3 VTRADVDVQPYAFTTK Unmodified 1809.9261 0.92611336 4263 Q9BZE4 GTPBP4 Nucleolar GTP-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.24 2 1 10 1 1 1 1 1 1 1 1 1 1 1 1 1 63.77 62.667 3 0.020394 78213 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 34.87 32.319 129100000 12070000 3980500 11569000 0 0 5557000 4351200 9773800 5492500 9334200 10178000 12489000 13093000 13306000 17904000 58713 4263 52771 495958;495959;495960;495961;495962;495963;495964;495965;495966;495967;495968;495969;495970 393458;393459;393460;393461;393462;393463 393462 5 VTRLTEELNK Unmodified 1201.6667 0.6666512 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 40.087 34.241 3 0.0015556 47400 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 100.55 52.995 449480000 396560000 52925000 0 0 0 0 0 0 0 0 0 0 0 0 0 58714 2495 52772 495971;495972 393464 393464 0 VTRMNINGQWEGEVNGRK Unmodified 2087.0331 0.033054823 1500 P46109 CRKL Crk-like protein yes yes 0 0 2 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 21.696 21.905 4 0.020496 22713 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 20.368 3.2895 147100000 0 0 0 10523000 3495200 11211000 11375000 0 10825000 8752400 20858000 23793000 15787000 10339000 20142000 58715 1500 52773 495973;495974;495975;495976;495977;495978;495979;495980;495981;495982;495983 393465;393466 393465 2 VTRPDSGHLYAMK Unmodified 1473.7398 0.73983292 2531 Q15418 RPS6KA1 Ribosomal protein S6 kinase alpha-1 yes yes 0 0 1 By MS/MS 2 0 1 1 41.962 35.226 3 0.0024902 48702 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.533 54.74 9573900 9573900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58716 2531 52774 495984 393467;393468 393467 2 VTRPQELDLTHQGQPITEEEQAAK Unmodified 2717.362 0.36203634 3025 Q70E73 RAPH1 Ras-associated and pleckstrin homology domains-containing protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8 3.46 2 6 2 1 1 1 1 1 1 58.206 57.358 3;4 2.4381E-11 64359 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.11 63.895 74524000 0 0 35294000 0 0 0 9171100 0 4756200 2791100 0 13233000 0 0 9279000 58717 3025 52775 495985;495986;495987;495988;495989;495990;495991;495992 393469;393470;393471;393472;393473 393469 4 VTSAVEALLSADSASR Unmodified 1575.8104 0.8104149 1488 P45974 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 81.207 81.355 2 1.1692E-14 94195 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 121.04 111.72 60975000 0 0 0 0 0 5229000 3863700 0 1941300 0 10001000 11731000 0 10961000 17249000 58718 1488 52776 495993;495994;495995;495996;495997;495998;495999;496000;496001 393474;393475;393476;393477;393478;393479;393480 393478 6 VTSAVEALLSADSASRK Unmodified 1703.9054 0.90537792 1488 P45974 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.317 75.376 3 2.3276E-05 86966 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 71.601 60.546 124950000 0 0 0 2964300 2347100 13037000 7017500 6676700 3368000 11434000 13245000 10715000 5559600 11227000 37359000 58719 1488 52777 496002;496003;496004;496005;496006;496007;496008;496009;496010;496011;496012;496013 393481;393482;393483;393484;393485;393486;393487;393488;393489;393490;393491;393492;393493;393494;393495 393493 15 VTSAVVGPSHEVQEQSSGPFK Unmodified 2169.0702 0.070211415 2649 Q2KHR3 QSER1 Glutamine and serine-rich protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 2 1 6 2 1 1 1 1 1 1 1 54.948 52.48 3 1.7092E-92 67872 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 131.09 119.44 94986000 0 42329000 13008000 8394400 0 0 0 13006000 0 0 0 0 0 18249000 0 58720 2649 52778 496014;496015;496016;496017;496018;496019;496020;496021;496022 393496;393497;393498;393499;393500;393501;393502;393503;393504;393505 393498 8 VTSAVVGPSHEVQEQSSGPFKK Unmodified 2297.1652 0.16517443 2649 Q2KHR3 QSER1 Glutamine and serine-rich protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 53.874 45.81 4 0.0016863 62831 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.188 39.497 20332000 20332000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58721 2649 52779 496023 393506 393506 1 VTSDADPMWYLK Unmodified 1424.6646 0.66460229 4689 Q9NW08 POLR3B DNA-directed RNA polymerase III subunit RPC2 yes yes 0 0 0 By MS/MS 2 0 1 1 83.388 78.667 2 0.00068305 97844 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.636 64.522 53525000 0 53525000 0 0 0 0 0 0 0 0 0 0 0 0 0 58722 4689 52780 496024 393507 393507 1 VTSEGAGLQLQK Unmodified 1229.6616 0.66156582 918 P10253 GAA Lysosomal alpha-glucosidase;76 kDa lysosomal alpha-glucosidase;70 kDa lysosomal alpha-glucosidase yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 38.567 38.391 2 0.0010703 43111 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 70.908 29.914 5673800 0 0 0 4493200 0 0 0 0 1180600 0 0 0 0 0 0 58723 918 52781 496025;496026 393508 393508 1 VTSFASNLHTDNLNAK Unmodified 1730.8588 0.85876208 457 O75128 COBL Protein cordon-bleu yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 51.611 51.69 3 0.00011344 58627 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 72.315 54.213 158720000 0 0 0 12842000 13402000 12249000 21120000 16940000 15058000 21428000 11164000 0 0 17443000 17075000 58724 457 52782 496027;496028;496029;496030;496031;496032;496033;496034;496035;496036 393509;393510;393511;393512;393513;393514;393515 393510 6 VTSFSTPPTPER Unmodified 1317.6565 0.65648044 2887 Q6ICG6 KIAA0930 Uncharacterized protein KIAA0930 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 46.639 46.922 2 0.01397 51954 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 43.77 23.983 26209000 0 0 0 0 0 4139400 1956900 0 0 4957000 6601000 0 0 3653100 4901400 58725 2887 52783 496037;496038;496039;496040;496041;496042 393516;393517;393518 393518 3 VTSGGVSESPSGFSK Unmodified 1424.6783 0.6783381 210 O14757 CHEK1 Serine/threonine-protein kinase Chk1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.323 34.506 2 1.0782E-23 37890 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 149.38 131.95 130460000 0 0 0 7050200 5532300 11329000 9631700 8170700 8007100 10927000 14318000 14494000 11838000 11696000 17470000 58726 210 52784 496043;496044;496045;496046;496047;496048;496049;496050;496051;496052;496053;496054 393519;393520;393521;393522;393523;393524;393525;393526;393527;393528;393529 393524 11 VTSGVKPASFDK Unmodified 1234.6558 0.65575216 4393 Q9H4A3 WNK1 Serine/threonine-protein kinase WNK1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.467 26.667 3 0.0022541 28903 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 60.628 50.341 116100000 0 0 0 7006900 11307000 3675900 16585000 14732000 4925200 8929300 9476200 12474000 8559200 8022700 10411000 58727 4393 52785 496055;496056;496057;496058;496059;496060;496061;496062;496063;496064;496065;496066 393530;393531;393532;393533;393534;393535;393536;393537 393537 5 VTSHTELTSNQQSANK Unmodified 1743.8388 0.83875492 1181 P25054 APC Adenomatous polyposis coli protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 12.799 12.246 3 0.00037347 11662 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 44.252 36.075 68874000 0 29928000 2243000 2616500 2179700 3223700 3310100 3763700 2374900 4368300 2646800 0 4249900 3332300 4637000 58728 1181 52786 496067;496068;496069;496070;496071;496072;496073;496074;496075;496076;496077;496078;496079;496080 393538;393539;393540;393541;393542;393543;393544;393545 393539 7 VTSIQDWVQK Unmodified 1202.6295 0.62953741 735 P00738 HP Haptoglobin;Haptoglobin alpha chain;Haptoglobin beta chain yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 27.857 28.188 2;3 0.01734 73564 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 109.71 80.553 87880000 0 0 0 2217700 0 0 0 11721000 0 18379000 13154000 18801000 0 7186200 16422000 58729 735 52787 496081;496082;496083;496084;496085;496086;496087 393546;393547 393547 1 VTSLEEELTDLRVEK Unmodified 1759.9204 0.92035928 2768 Q5T1M5 FKBP15 FK506-binding protein 15 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.08 3.33 2 1 9 2 1 1 1 1 1 1 1 1 1 1 82.008 81.237 3 5.588E-40 101899 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 141.34 105.99 210410000 0 156040000 8395900 0 0 2852900 0 2901400 2502800 3941700 4837400 4912100 1828300 2800500 19391000 58730 2768 52788 496088;496089;496090;496091;496092;496093;496094;496095;496096;496097;496098;496099 393548;393549;393550;393551;393552;393553;393554 393549 7 VTSLHNQAFEIEK Unmodified 1514.7729 0.77290718 3509 Q8TDY2 RB1CC1 RB1-inducible coiled-coil protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.33 3.77 3 6 1 1 1 1 1 1 1 1 1 51.236 49.442 3 2.1718E-10 62887 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 115.8 95.22 152150000 57273000 19905000 22300000 0 0 0 6009000 4787200 11092000 0 6851200 0 0 12237000 11692000 58731 3509 52789 496100;496101;496102;496103;496104;496105;496106;496107;496108 393555;393556;393557;393558;393559 393559 5 VTSPTTYVLDEDEPR Unmodified 1720.8156 0.81555986 5063 Q9UPW5 AGTPBP1 Cytosolic carboxypeptidase 1 yes yes 0 0 0 By MS/MS 10 0 1 1 67.513 67.649 2 0.0006973 77935 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 66.262 56.575 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58732 5063 52790 496109 393560 393560 1 VTSQQFEAEAADEK Unmodified 1551.7053 0.70528113 2953 Q6PID6 TTC33 Tetratricopeptide repeat protein 33 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 41.39 41.122 2 4.1829E-72 45058 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 186.02 165.18 137390000 0 31884000 0 4368900 4075600 14059000 7249600 6090800 0 9804500 11236000 12818000 8135300 6970000 20704000 58733 2953 52791 496110;496111;496112;496113;496114;496115;496116;496117;496118;496119;496120;496121;496122 393561;393562;393563;393564;393565;393566;393567;393568;393569;393570;393571;393572;393573;393574 393566 14 VTSQSQEQAILQR Unmodified 1486.774 0.77396981 3498 Q8TD31 CCHCR1 Coiled-coil alpha-helical rod protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 39.454 39.881 2 0.002054 44372 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 60.434 42.569 21068000 0 0 0 0 0 0 0 3219100 0 0 5042500 0 5974100 0 6832700 58734 3498 52792 496123;496124;496125;496126;496127;496128 393575;393576;393577;393578 393577 4 VTSQVLGLGINGK Unmodified 1284.7402 0.74015049 1560 P49137 MAPKAPK2 MAP kinase-activated protein kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 6.8 3.92 2 3 1 1 1 1 1 69.422 66.826 2 1.7257E-08 85608 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.76 94.502 132030000 45074000 73871000 0 0 0 2402300 0 0 0 0 0 0 0 3040700 7637500 58735 1560 52793 496129;496130;496131;496132;496133 393579;393580;393581 393579 2 VTSSEPPNPASSSK Unmodified 1386.6627 0.66268803 3630 Q92575 UBXN4 UBX domain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.016 20.218 2 0.027893 20576 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 32.523 18.317 37409000 0 0 0 3138900 3155400 2665500 3063000 3379000 2208600 4228200 3161200 3839000 2821700 2695500 3052900 58736 3630 52794 496134;496135;496136;496137;496138;496139;496140;496141;496142;496143;496144;496145 393582 393582 1 VTSSGVLLLDNYSDR Unmodified 1637.8261 0.82606496 2159 Q08499;P27815 PDE4D;PDE4A cAMP-specific 3',5'-cyclic phosphodiesterase 4D;cAMP-specific 3',5'-cyclic phosphodiesterase 4A yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 76.981 77.072 2 0.0013371 89059 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 64.199 49.964 16427000 0 0 0 0 0 3701700 0 2573000 0 6114200 0 0 4037700 0 0 58737 2159 52795 496146;496147;496148;496149;496150 393583;393584;393585;393586 393584 4 VTSSIPVFDLQDGGR Unmodified 1589.8049 0.80493559 3084 Q7Z3K3 POGZ Pogo transposable element with ZNF domain yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 80.891 80.91 2 0.0012752 93543 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 56.783 41.81 24349000 0 0 0 2022000 2293700 1613400 2943400 2101000 0 4292500 3551700 0 2621400 2910300 0 58738 3084 52796 496151;496152;496153;496154;496155;496156;496157;496158;496159 393587;393588;393589;393590;393591;393592;393593;393594 393590 8 VTSSIPVFDLQDGGRK Unmodified 1717.8999 0.89989861 3084 Q7Z3K3 POGZ Pogo transposable element with ZNF domain yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.982 74.043 3 0.00013426 85323 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 47.548 37.209 153360000 0 0 0 10396000 9752200 17125000 9631600 8272200 13960000 14705000 12907000 15175000 12893000 10995000 17552000 58739 3084 52797 496160;496161;496162;496163;496164;496165;496166;496167;496168;496169;496170;496171 393595;393596;393597;393598;393599;393600;393601;393602;393603;393604;393605;393606 393596 12 VTSSLGDIPVSR Unmodified 1229.6616 0.66156582 4949 Q9UJY4 GGA2 ADP-ribosylation factor-binding protein GGA2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 2 1 1 1 1 1 57.298 57.523 2 2.4878E-05 65106 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 93.058 48.748 311620000 0 0 0 0 0 39375000 21871000 0 19948000 78656000 63132000 0 42212000 0 46427000 58740 4949 52798 496172;496173;496174;496175;496176;496177;496178;496179 393607;393608;393609;393610;393611;393612;393613 393611 6 VTSSMSSPSMQPK Unmodified 1365.6268 0.62683657 2239 Q13136 PPFIA1 Liprin-alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 30.584 31.002 2 0.0042704 32500 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.82 47.308 8659700 0 0 0 0 0 0 0 0 4058100 0 0 0 0 0 4601500 58741 2239 52799 496180;496181;496182 393614;393615 393615 2 VTSTNNMAYNK Unmodified 1241.571 0.57103625 3865 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18.214 17.765 2 0.0014517 18194 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 85.731 81.118 112620000 5501400 17347000 0 4418800 5113800 5702900 5720400 4951600 3672600 7228200 7987300 11090000 6441400 8978000 18470000 58742 3865 52800 496183;496184;496185;496186;496187;496188;496189;496190;496191;496192;496193;496194;496195;496196 393616;393617;393618;393619;393620;393621;393622;393623;393624;393625;393626;393627;393628;393629 393616 13 VTSTNNMAYNK Oxidation (M) 1257.566 0.56595087 3865 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 yes yes 0 1 0 By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 7.9816 8.1521 2 0.0036818 5677 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.676 46.45 17573000 0 0 0 1308400 0 0 0 0 1885700 2663600 0 4877200 2258100 2076500 2503100 58743 3865 52800 496197;496198;496199;496200;496201;496202;496203 393630;393631 393630 5376 2 VTSVGNPTIK Unmodified 1014.571 0.5709599 2379 Q14155 ARHGEF7 Rho guanine nucleotide exchange factor 7 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.08 3.33 2 1 9 2 1 1 1 1 1 1 1 1 1 1 29.744 28.875 2 0.00053542 36971 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.73 65.832 307790000 0 152160000 923020 9049800 12911000 22439000 0 11098000 11904000 0 19793000 20108000 17648000 0 29751000 58744 2379 52801 496204;496205;496206;496207;496208;496209;496210;496211;496212;496213;496214;496215 393632;393633;393634;393635;393636;393637 393634 6 VTSVSTLK Unmodified 833.48583 0.48583328 2041 Q00613 HSF1 Heat shock factor protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 22.771 22.266 2 0.01042 23570 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 79.713 79.713 427070000 0 230000000 2584600 11859000 10681000 15670000 15911000 0 12411000 30621000 27578000 37881000 0 0 31872000 58745 2041 52802 496216;496217;496218;496219;496220;496221;496222;496223;496224;496225;496226;496227 393638;393639;393640;393641 393638 4 VTSVVFHPSQDLVFSASPDATIR Unmodified 2472.2649 0.26488848 5017 Q9UMS4 PRPF19 Pre-mRNA-processing factor 19 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 83.674 83.789 3 2.0102E-34 96662 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.184 56.561 87928000 0 0 0 0 0 4763300 0 0 0 21346000 0 9705700 0 0 52113000 58746 5017 52803 496228;496229;496230;496231;496232 393642;393643;393644;393645;393646 393644 5 VTSVVVDVVPR Unmodified 1168.6816 0.68157298 987 P13798 APEH Acylamino-acid-releasing enzyme yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 68.851 68.927 2 0.0083538 78098 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 66.962 52.805 37422000 0 0 0 3569300 1428100 0 0 1957100 0 3225000 3877700 4500900 2117700 5322100 11424000 58747 987 52804 496233;496234;496235;496236;496237;496238;496239;496240;496241 393647;393648 393648 2 VTTAAAAAATSQDPEQHLTELREPAPGTNQR Unmodified 3230.5916 0.59159536 4863 Q9UBW8 COPS7A COP9 signalosome complex subunit 7a yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 63.077 63.243 4 2.027E-210 72283 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 195.09 187.34 430250000 0 0 0 0 21574000 50076000 28566000 18168000 27333000 60372000 39385000 49562000 27417000 32562000 75230000 58748 4863 52805 496242;496243;496244;496245;496246;496247;496248;496249;496250;496251;496252 393649;393650;393651;393652;393653;393654;393655;393656;393657;393658;393659;393660 393654 12 VTTAAAAAATSQDPEQHLTELREPAPGTNQRQPSK Unmodified 3670.8299 0.82992815 4863 Q9UBW8 COPS7A COP9 signalosome complex subunit 7a yes yes 0 0 2 By MS/MS By MS/MS 2 0 4 2 2 65.362 59.336 4;5 4.0044E-270 79389 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 231.45 231.45 788450000 742300000 0 46144000 0 0 0 0 0 0 0 0 0 0 0 0 58749 4863 52806 496253;496254;496255;496256 393661;393662;393663 393662 2 VTTATEQAEREEIMK Oxidation (M) 1750.8407 0.84072875 1597 P49757 NUMB Protein numb homolog yes yes 0 1 1 By MS/MS By MS/MS 10 0 2 1 1 28.83 28.908 3 0.0012177 31215 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 44.44 33 60636000 0 0 0 0 0 6507400 0 0 0 54129000 0 0 0 0 0 58750 1597 52807 496257;496258 393664 393664 2571 1 VTTCGTDVIALTK Unmodified 1377.7174 0.71736614 3751 Q96B45 C10orf32 UPF0693 protein C10orf32 yes yes 0 0 0 By MS/MS 2 0 1 1 67.031 61.115 2 0.027861 78108 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.266 33.192 48307000 0 48307000 0 0 0 0 0 0 0 0 0 0 0 0 0 58751 3751 52808 496259 393665 393665 1 VTTEEFEAPMPSAVSGDDSQLTASR Unmodified 2624.1912 0.19119077 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 78.045 78.197 3 0.0018069 90276 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 26.273 22.378 11538000 0 0 0 0 0 0 0 5546600 0 0 0 0 0 5991500 0 58752 3443 52809 496260;496261 393666 393666 1 VTTEIQLPSQSPVEEQSPASLSSLR Unmodified 2682.3712 0.37120404 3573 Q8WWI1 LMO7 LIM domain only protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.898 82.96 3 1.5077E-90 95737 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 132.72 125.19 253980000 0 0 0 1945000 14013000 11397000 8758500 14074000 13147000 36802000 27712000 29834000 14836000 17392000 64065000 58753 3573 52810 496262;496263;496264;496265;496266;496267;496268;496269;496270;496271;496272;496273 393667;393668;393669;393670;393671;393672;393673;393674;393675;393676;393677;393678 393670 12 VTTELAQADSSQVPNLIPVLMFK Unmodified 2500.3247 0.32471154 2823 Q5VW36 FOCAD Focadhesin yes yes 0 0 0 By MS/MS 2 0 1 1 100.58 95.866 3 0.0086667 118532 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 26.412 22.25 9899300 0 9899300 0 0 0 0 0 0 0 0 0 0 0 0 0 58754 2823 52811 496274 393679 393679 1 VTTFEHQYVSAIK Unmodified 1521.7827 0.78274359 1257 P29992 GNA11 Guanine nucleotide-binding protein subunit alpha-11 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 61.261 56.422 3 0.00081846 69857 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 76.588 65.318 40935000 0 25218000 15717000 0 0 0 0 0 0 0 0 0 0 0 0 58755 1257 52812 496275;496276 393680;393681;393682;393683 393683 4 VTTGTSNTTAIK Unmodified 1192.6299 0.62993134 2514 Q15291 RBBP5 Retinoblastoma-binding protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.628 18.826 2 0.00078564 17738 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.533 48.428 253300000 0 0 0 12628000 13620000 17429000 15169000 19329000 15584000 24656000 21180000 27691000 23520000 18825000 43667000 58756 2514 52813 496277;496278;496279;496280;496281;496282;496283;496284;496285;496286;496287;496288 393684;393685;393686;393687;393688;393689;393690;393691;393692;393693 393687 10 VTTHPLAK Unmodified 865.50215 0.50215205 4015 Q99497 PARK7 Protein deglycase DJ-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 10.711 10.068 2 0.018715 13686 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.09 41.95 6832400000 3879800000 1368500000 1493600000 2625200 971570 0 2116700 1553900 936050 891720 0 18595000 1444400 15485000 45920000 58757 4015 52814 496289;496290;496291;496292;496293;496294;496295;496296;496297;496298;496299;496300;496301 393694;393695;393696;393697 393694 2 VTTINQEIQK Unmodified 1172.6401 0.6401021 4260 Q9BZD4 NUF2 Kinetochore protein Nuf2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 15 1 1 1 2 1 2 1 2 1 1 2 35.568 35.818 2 0.0019472 37626 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 87.476 52.038 147470000 0 0 0 6551900 9758500 11207000 13188000 0 5901900 19198000 22752000 23511000 7623800 9419400 18360000 58758 4260 52815 496302;496303;496304;496305;496306;496307;496308;496309;496310;496311;496312;496313;496314;496315;496316 393698;393699;393700;393701;393702;393703;393704 393704 7 VTTLDNGLRVASQNK Unmodified 1614.8689 0.86893283 2182 Q10713 PMPCA Mitochondrial-processing peptidase subunit alpha yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 51.736 45.747 3 0.0070001 62665 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.207 28.185 29078000 26049000 0 3028600 0 0 0 0 0 0 0 0 0 0 0 0 58759 2182 52816 496317;496318 393705 393705 1 VTTLPGHIQAVYVQNVVK Unmodified 1965.1047 0.10474643 193 O14617 AP3D1 AP-3 complex subunit delta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.972 77.032 3 0.00012601 88909 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 60.246 55.344 143040000 0 0 0 2373900 4208300 12080000 5069000 10575000 8531300 16065000 8850000 15557000 5757700 10335000 43634000 58760 193 52817 496319;496320;496321;496322;496323;496324;496325;496326;496327;496328;496329;496330 393706;393707;393708;393709;393710;393711;393712;393713;393714;393715;393716 393707 11 VTTMDAELEFAIQPNTTGK Oxidation (M) 2080.9987 0.99868596 1198;1017;1345 P26038;P35241;P15311 MSN;RDX;EZR Moesin;Radixin;Ezrin no no 0 1 0 By MS/MS By MS/MS 6 4 1 1 1 1 80.514 75.802 2 1.4533E-121 94373 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 211.83 192.19 43034000 0 43034000 0 0 0 0 0 0 0 0 0 0 0 0 0 58761 1198;1345;1017 52818 496331;496332 393717;393718 393717 1415 2 VTTQTSLPLFR Unmodified 1261.703 0.7030367 2323 Q13596 SNX1 Sorting nexin-1 yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.364 76.422 2 1.9441E-05 88061 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 149.82 65.248 299410000 0 0 0 14363000 11458000 25696000 21659000 22925000 14627000 28399000 34367000 31084000 21232000 23640000 49959000 58762 2323 52819 496333;496334;496335;496336;496337;496338;496339;496340;496341;496342;496343;496344 393719;393720;393721;393722;393723;393724;393725;393726 393725 8 VTTTVHNIIVGK Unmodified 1280.7452 0.74523587 1132 P22059 OSBP Oxysterol-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 6 2 2 2 53.305 47.351 2;3 4.1134E-13 65117 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 145.99 114.76 216940000 142210000 43166000 31569000 0 0 0 0 0 0 0 0 0 0 0 0 58763 1132 52820 496345;496346;496347;496348;496349;496350 393727;393728;393729;393730;393731;393732 393730 3 VTTVASHTSDSDVPSGVTEVVVK Unmodified 2313.17 0.16998504 931 P10909 CLU Clusterin;Clusterin beta chain;Clusterin alpha chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 2 1 1 1 1 1 63.692 63.787 3 2.4709E-16 73718 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 79.895 71.076 695890000 0 0 0 34518000 50736000 57442000 47497000 58147000 39306000 70348000 69000000 68979000 55097000 53804000 91013000 58764 931 52821 496351;496352;496353;496354;496355;496356;496357;496358;496359;496360;496361;496362;496363 393733;393734;393735;393736;393737;393738;393739;393740;393741;393742;393743;393744;393745;393746 393745 14 VTTVTEIGK Unmodified 946.53351 0.53351176 1721 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.166 31.354 2 0.011336 33467 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 62.969 18.549 624340000 0 0 0 25871000 35691000 54258000 49247000 46090000 33353000 56266000 59420000 87912000 52640000 44216000 79372000 58765 1721 52822 496364;496365;496366;496367;496368;496369;496370;496371;496372;496373;496374;496375 393747;393748;393749;393750;393751;393752;393753;393754;393755;393756;393757 393755 9 VTTVVATLGQGPER Unmodified 1426.778 0.77799256 1604 P49840 GSK3A Glycogen synthase kinase-3 alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.685 58.8 2 0.00012181 67059 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 107.03 88.801 68441000 0 0 0 3390500 3808700 5038900 7785500 4248500 3700300 6368100 5172400 6738600 4280000 6628800 11281000 58766 1604 52823 496376;496377;496378;496379;496380;496381;496382;496383;496384;496385;496386;496387 393758;393759;393760;393761;393762;393763;393764;393765;393766;393767;393768;393769;393770;393771 393766 14 VTTVVATLGQGPERSQEVAYTDIK Unmodified 2561.3337 0.33369632 1604 P49840 GSK3A Glycogen synthase kinase-3 alpha yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.33 0.471 2 1 1 1 1 78.388 73.641 3 4.5697E-24 94381 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.29 95.125 23386000 11833000 3144600 8408300 0 0 0 0 0 0 0 0 0 0 0 0 58767 1604 52824 496388;496389;496390 393772;393773;393774;393775 393773 4 VTTVVATPGQGPDRPQEVSYTDTK Unmodified 2545.266 0.26601069 1605 P49841 GSK3B Glycogen synthase kinase-3 beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 55.505 54.182 3 1.3327E-78 61008 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 141.1 123.1 532080000 15480000 123090000 7488100 21789000 24271000 28497000 39470000 21632000 29998000 35617000 32545000 45354000 28796000 28644000 49409000 58768 1605 52825 496391;496392;496393;496394;496395;496396;496397;496398;496399;496400;496401;496402;496403;496404;496405;496406 393776;393777;393778;393779;393780;393781;393782;393783;393784;393785;393786;393787;393788;393789;393790;393791;393792;393793;393794;393795;393796;393797;393798;393799;393800 393783 25 VTVAFIR Unmodified 804.48577 0.48577371 5006 Q9ULV0 MYO5B Unconventional myosin-Vb yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 60.931 61.058 2 0.023574 69144 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 92.692 51.772 19394000 0 0 0 0 2424400 2448900 2306800 0 0 2040200 2244800 3595100 2356900 1976900 0 58769 5006 52826 496407;496408;496409;496410;496411;496412;496413;496414 393801 393801 1 VTVAGLAGK Unmodified 814.49125 0.49125301 4015 Q99497 PARK7 Protein deglycase DJ-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.29 3.65 3 2 9 2 2 1 1 1 1 1 1 1 1 1 1 39.674 38.052 2 0.0085848 40804 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.198 17.741 6900800000 2106900000 3809600000 148920000 0 0 0 9211500 11746000 5803500 13431000 134210000 153440000 12596000 113330000 381510000 58770 4015 52827 496415;496416;496417;496418;496419;496420;496421;496422;496423;496424;496425;496426;496427;496428 393802;393803;393804;393805;393806;393807;393808;393809;393810;393811;393812;393813;393814;393815 393807 13 VTVDDLPNR Unmodified 1027.5298 0.52982336 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.377 40.556 2 0.0051115 45273 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 83.265 49.092 448390000 0 0 0 25669000 28633000 32641000 35400000 28557000 30285000 43266000 50334000 54770000 42887000 34018000 41926000 58771 4139 52828 496429;496430;496431;496432;496433;496434;496435;496436;496437;496438;496439;496440 393816;393817;393818;393819;393820;393821;393822;393823;393824;393825;393826 393816 10 VTVDTGVIPASEEK Unmodified 1443.7457 0.74568938 437 O60841 EIF5B Eukaryotic translation initiation factor 5B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55.777 54.884 2 5.1626E-13 62242 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 134.13 74.222 2277100000 31285000 856670000 0 80722000 73391000 80401000 97673000 90199000 77876000 115210000 153100000 180200000 135920000 124620000 179810000 58772 437 52829 496441;496442;496443;496444;496445;496446;496447;496448;496449;496450;496451;496452;496453;496454 393827;393828;393829;393830;393831;393832;393833;393834;393835;393836;393837;393838;393839;393840;393841;393842;393843;393844 393835 18 VTVESTPDLEK Unmodified 1216.6187 0.61869795 2398 Q14244 MAP7 Ensconsin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 41.933 41.688 2 6.3305E-05 46658 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 113.62 87.238 859150000 0 67229000 0 46470000 50128000 59255000 55694000 55805000 56808000 75749000 82171000 94000000 70036000 52152000 93657000 58773 2398 52830 496455;496456;496457;496458;496459;496460;496461;496462;496463;496464;496465;496466;496467 393845;393846;393847;393848;393849;393850;393851;393852;393853;393854;393855;393856;393857;393858;393859 393852 15 VTVGDAATTAAASSSSVTR Unmodified 1750.8697 0.86972069 4997 Q9ULJ3 ZBTB21 Zinc finger and BTB domain-containing protein 21 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 2 1 1 1 2 1 1 2 50.365 50.455 2;3 4.405E-58 57034 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 154.72 107.42 188270000 0 0 0 0 36930000 29582000 0 0 0 25164000 40412000 33838000 22345000 0 0 58774 4997 52831 496468;496469;496470;496471;496472;496473;496474;496475;496476;496477;496478 393860;393861;393862;393863;393864;393865;393866;393867;393868;393869;393870;393871;393872;393873 393860 14 VTVGVDGTLYK Unmodified 1150.6234 0.6233894 1702 P52789 HK2 Hexokinase-2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 61.402 56.218 2 0.00027978 71853 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.66 83.28 226820000 0 225170000 1653100 0 0 0 0 0 0 0 0 0 0 0 0 58775 1702 52832 496479;496480;496481 393874;393875;393876;393877 393874 4 VTVLEEK Unmodified 816.45928 0.45928418 2556 Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 26.745 26.592 2 0.023411 28628 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 91.906 50.404 370520000 0 37512000 0 18169000 17099000 28581000 25532000 30077000 30073000 32351000 27244000 35111000 36072000 22824000 29878000 58776 2556 52833 496482;496483;496484;496485;496486;496487;496488;496489;496490;496491;496492;496493;496494 393878;393879;393880;393881 393880 4 VTVLFAGQHIAK Unmodified 1282.7398 0.73975656 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 2 24 2 2 2 2 2 2 2 2 2 2 2 2 2 60.792 60.259 2;3 0.00034525 85118 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 106.68 85.781 956410000 138820000 0 0 35651000 28907000 65803000 51354000 33799000 37907000 61496000 78363000 125480000 54978000 61615000 182230000 58777 1124 52834 496495;496496;496497;496498;496499;496500;496501;496502;496503;496504;496505;496506;496507;496508;496509;496510;496511;496512;496513;496514;496515;496516;496517;496518;496519;496520 393882;393883;393884;393885;393886;393887;393888 393886 2 VTVLFAGQHISK Unmodified 1298.7347 0.73467118 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 58.508 58.264 3 0.015752 65858 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 38.3 26.032 121410000 0 0 4072600 4800800 4127500 15620000 7848700 0 9453800 0 16597000 2129500 8066600 9679200 39015000 58778 487 52835 496521;496522;496523;496524;496525;496526;496527;496528;496529;496530;496531 393889;393890;393891 393890 3 VTVLGHVQR Unmodified 1007.5876 0.58761301 861;1063 P17858;P08237 PFKL;PFKM ATP-dependent 6-phosphofructokinase, liver type;ATP-dependent 6-phosphofructokinase, muscle type no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 29.512 29.769 2 0.0032404 32341 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 129.68 99.498 395980000 0 0 0 0 23524000 21496000 0 29975000 18728000 35355000 40532000 68382000 40838000 28684000 88467000 58779 1063;861 52836 496532;496533;496534;496535;496536;496537;496538;496539;496540;496541 393892;393893;393894;393895;393896;393897;393898;393899;393900;393901 393895 6 VTVLGQPK Unmodified 840.5069 0.50690308 43 B9A064 IGLL5 Immunoglobulin lambda-like polypeptide 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 31.62 31.673 2 0.022922 34164 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 60.76 32.337 47266000 0 0 0 8890300 2302200 0 2368500 9487800 0 17345000 3173400 0 3698600 0 0 58780 43 52837 496542;496543;496544;496545;496546;496547;496548 393902;393903;393904;393905 393902 4 VTVLTLQDK Unmodified 1015.5914 0.59136099 4857 Q9UBT2 UBA2 SUMO-activating enzyme subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.52 3.05 3 1 17 1 2 1 1 1 2 1 1 2 1 2 2 2 2 55.048 54.13 2 0.00022531 59733 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 148.99 85.681 1295400000 82766000 957590000 26148000 7438700 4023700 14807000 6006200 0 5805600 18820000 30160000 21974000 10812000 29866000 79170000 58781 4857 52838 496549;496550;496551;496552;496553;496554;496555;496556;496557;496558;496559;496560;496561;496562;496563;496564;496565;496566;496567;496568;496569 393906;393907;393908;393909;393910;393911;393912;393913;393914;393915;393916;393917;393918;393919;393920;393921;393922;393923 393911 16 VTVMASLR Unmodified 875.48987 0.48987281 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 48.605 48.996 2 0.0071996 54127 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 125.25 67.085 82369000 0 0 0 0 0 0 6261800 6606100 0 0 14826000 21384000 0 8943500 24348000 58782 1986 52839 496570;496571;496572;496573;496574;496575 393924;393925;393926;393927 393924 3 VTVMASLR Oxidation (M) 891.48479 0.48478743 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 1 0 By MS/MS By matching By matching 10 0 3 1 1 1 34.837 35.176 2 0.032641 39512 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 47.082 26.527 28481000 0 0 0 0 4012200 0 0 0 0 0 0 13321000 0 0 11148000 58783 1986 52839 496576;496577;496578 393928 393928 1 VTVMSTINPTK Unmodified 1189.6377 0.63765925 2308 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog yes yes 0 0 0 By MS/MS 10 0 1 1 52.096 52.375 2 0.023842 59265 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 54.584 33.309 22700000 0 0 0 0 0 0 0 0 0 0 0 0 22700000 0 0 58784 2308 52840 496579 393929 393929 1 VTVNPGLLVPLDVK Unmodified 1462.8759 0.87591569 99 Q6KB66;CON__Q6KB66-1 KRT80 Keratin, type II cytoskeletal 80 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 89.625 89.316 2 2.2854E-05 103575 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 87.363 81.328 + 165180000 0 14594000 0 12257000 9284100 8784900 7036900 26553000 8440300 18756000 13022000 21365000 10096000 5941900 9047300 58785 99 52841 496580;496581;496582;496583;496584;496585;496586;496587;496588;496589;496590;496591;496592 393930;393931;393932;393933;393934;393935;393936;393937;393938;393939;393940;393941;393942;393943 393937 14 VTVPTSGNTIESPLHENISNSTSFK Unmodified 2658.3137 0.31368916 3317 Q8N302 AGGF1 Angiogenic factor with G patch and FHA domains 1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 77.867 74.251 3 4.002E-39 92540 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.31 106.2 63357000 0 55972000 7384900 0 0 0 0 0 0 0 0 0 0 0 0 58786 3317 52842 496593;496594;496595 393944;393945;393946;393947 393944 4 VTVVCEPEDYVVVSTEMQSSESK Unmodified 2601.1826 0.18259992 1307 P31939 ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 84.439 80.193 2;3 2.928E-83 99599 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 148.52 140.27 152300000 0 152300000 0 0 0 0 0 0 0 0 0 0 0 0 0 58787 1307 52843 496596;496597;496598 393948;393949 393948 1 VTVVDVNESR Unmodified 1116.5775 0.57750184 425 O60701 UGDH UDP-glucose 6-dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 36.196 36.94 2 0.019096 40944 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 62.823 34.649 11290000 0 0 0 0 0 0 0 0 0 0 0 11290000 0 0 0 58788 425 52844 496599;496600 393950;393951 393950 1 VTWDGHSGSMAR Unmodified 1302.5775 0.57751861 2539 Q15459 SF3A1 Splicing factor 3A subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.65 1.63 1 22 1 1 1 2 2 2 2 2 2 2 2 2 2 31.483 31.43 2;3 0.00021325 33535 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 70.412 61.899 489140000 5218600 0 0 16054000 17565000 29829000 28162000 40478000 23957000 40055000 47146000 64726000 36089000 67172000 72693000 58789 2539 52845 496601;496602;496603;496604;496605;496606;496607;496608;496609;496610;496611;496612;496613;496614;496615;496616;496617;496618;496619;496620;496621;496622;496623 393952;393953;393954;393955;393956;393957;393958;393959;393960;393961;393962;393963;393964;393965;393966;393967;393968;393969;393970 393967 16 VTWDGHSGSMAR Oxidation (M) 1318.5724 0.57243324 2539 Q15459 SF3A1 Splicing factor 3A subunit 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 20.29 20.416 3 0.017326 20799 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 40.475 34.182 105150000 0 0 0 7658000 8241600 17562000 11098000 8274400 0 16949000 12692000 22673000 0 0 0 58790 2539 52845 496624;496625;496626;496627;496628;496629;496630;496631 393971 393971 4180 0 VTYCPTEPGNYIINIK Unmodified 1880.9342 0.93423521 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 2 2 1 1 1 1 1 1 1 2 2 80.689 80.738 2;3 1.8136E-27 93476 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 131.42 119.8 226130000 0 0 0 3921700 8632600 17533000 7724300 12144000 11724000 14435000 26334000 29510000 11237000 25660000 57277000 58791 1124 52846 496632;496633;496634;496635;496636;496637;496638;496639;496640;496641;496642;496643;496644;496645;496646;496647 393972;393973;393974;393975;393976;393977;393978;393979;393980;393981;393982;393983;393984 393983 13 VTYLVHNFEEGGGVAMGMYNQDK 2 Oxidation (M) 2590.1468 0.14682353 552 O75874 IDH1 Isocitrate dehydrogenase [NADP] cytoplasmic yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.8 3.12 3 1 1 2 1 1 1 72.528 68.446 3 9.0397E-126 88823 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 183.09 175.65 202010000 111530000 31710000 37773000 0 0 0 0 0 0 0 0 0 0 0 20992000 58792 552 52847 496648;496649;496650;496651;496652 393985;393986;393987;393988 393987 720;721 4 VTYLVHNFEEGGGVAMGMYNQDK Oxidation (M) 2574.1519 0.15190891 552 O75874 IDH1 Isocitrate dehydrogenase [NADP] cytoplasmic yes yes 0 1 0 By MS/MS By MS/MS 2 0 4 2 2 79.129 73.734 3 1.7636E-81 95352 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 143.48 140.64 251810000 236570000 0 15240000 0 0 0 0 0 0 0 0 0 0 0 0 58793 552 52847 496653;496654;496655;496656 393989;393990;393991;393992 393990 720;721 4 VTYLVHNFEEGGGVAMGMYNQDK Unmodified 2558.157 0.15699429 552 O75874 IDH1 Isocitrate dehydrogenase [NADP] cytoplasmic yes yes 0 0 0 By MS/MS 2 0 1 1 85.205 77.075 3 3.4751E-123 100562 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 136.77 128.77 117290000 117290000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58794 552 52847 496657 393993;393994;393995 393995 3 VTYRPLDPDNYDK Unmodified 1594.7627 0.76273643 433 O60825 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.65 2.93 2 1 14 1 2 1 1 1 2 1 1 2 1 1 1 1 1 51.597 50.972 2;3 4.1107E-05 57575 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 66.784 61.63 730320000 0 5006500 32610000 50496000 72396000 69391000 71498000 45783000 36863000 65472000 42056000 53641000 52272000 40311000 92530000 58795 433 52848 496658;496659;496660;496661;496662;496663;496664;496665;496666;496667;496668;496669;496670;496671;496672;496673;496674 393996;393997;393998;393999;394000;394001;394002;394003;394004;394005;394006;394007;394008;394009;394010;394011;394012;394013;394014;394015;394016;394017;394018;394019;394020;394021;394022;394023;394024;394025;394026;394027;394028 394002 33 VTYTPMAPGSYLISIK Oxidation (M) 1755.9117 0.91170885 1124 P21333 FLNA Filamin-A yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 82.836 82.941 2 7.8255E-15 95621 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.407 82.27 150240000 0 0 0 0 5371300 14488000 5629100 7685000 6254100 15600000 15560000 17798000 6084600 11799000 43971000 58796 1124 52849 496675;496676;496677;496678;496679;496680;496681;496682;496683;496684;496685 394029;394030;394031;394032;394033;394034;394035;394036 394030 1616 8 VTYTPMAPGSYLISIK Unmodified 1739.9168 0.91679423 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 87.099 87.255 2 5.6727E-06 100869 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.014 70.907 12578000 0 0 0 0 0 0 0 0 0 0 1734100 0 0 1184600 9659500 58797 1124 52849 496686;496687;496688 394037 394037 1 VTYVVIGDGRDEEIAAK Unmodified 1833.9472 0.94724273 4017 Q99504 EYA3 Eyes absent homolog 3 yes yes 0 0 1 By MS/MS 3 0 1 1 67.537 62.851 3 0.030528 77179 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 30.418 20.361 5515700 0 5515700 0 0 0 0 0 0 0 0 0 0 0 0 0 58798 4017 52850 496689 394038 394038 1 VTYVVLDEADR Unmodified 1278.6456 0.6455814 3041 Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 62.173 62.512 2 0.022689 71251 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 66.595 46.819 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58799 3041 52851 496690;496691;496692 394039;394040;394041 394041 3 VVACNLYPFVK Unmodified 1308.69 0.69002918 1307 P31939 ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 77.81 78.006 2 0.0030628 89671 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.438 67.911 24188000 0 0 0 0 0 0 0 0 0 0 5285900 0 0 4401800 14501000 58800 1307 52852 496693;496694;496695 394042 394042 1 VVACTSAFLLWDPTK Unmodified 1706.8702 0.87017839 1262 P30043 BLVRB Flavin reductase (NADPH) yes yes 0 0 0 By MS/MS 2 0 1 1 96.352 88.221 2 0.021232 114018 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.211 37.391 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58801 1262 52853 496696 394043 394043 1 VVADGAGLPGEDWVFVSSK Unmodified 1931.9629 0.9628928 2335 Q13630 TSTA3 GDP-L-fucose synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 8 3.46 1 3 1 1 1 1 87.666 87.175 2 0.00027694 105314 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 104.41 85.133 24830000 0 0 7449000 0 0 0 0 0 0 0 3056900 1839400 0 0 12485000 58802 2335 52854 496697;496698;496699;496700 394044;394045;394046 394045 2 VVAECTLK Unmodified 918.48445 0.48445308 4564 Q9NQB0;Q9HCS4 TCF7L2;TCF7L1 Transcription factor 7-like 2;Transcription factor 7-like 1 yes no 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 22.897 23.298 2 0.028474 24493 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 56.721 26.914 18457000 0 0 0 0 0 0 0 0 0 2781900 3104700 6000200 4020400 2549200 0 58803 4564 52855 496701;496702;496703;496704;496705 394047;394048 394047 2 VVAEEAWENHLK Unmodified 1423.7096 0.70957864 5198 Q9Y4E8 USP15 Ubiquitin carboxyl-terminal hydrolase 15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6 4 6 6 2 2 2 1 1 1 1 1 1 56.63 53.605 2;3 1.2852E-15 67399 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 147.62 138.41 436720000 41135000 234100000 113050000 5717300 3954700 0 0 0 5438000 9635400 0 0 12245000 11451000 0 58804 5198 52856 496706;496707;496708;496709;496710;496711;496712;496713;496714;496715;496716;496717 394049;394050;394051;394052;394053;394054;394055 394052 6 VVAEGFDSANGINISPDDK Unmodified 1946.9222 0.92215019 2503 Q15165 PON2 Serum paraoxonase/arylesterase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 72.75 72.195 2 1.008E-110 88837 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 202.4 190.13 256610000 0 58015000 0 10485000 18817000 14780000 16462000 14234000 9950100 21942000 18552000 19742000 18349000 15343000 19937000 58805 2503 52857 496718;496719;496720;496721;496722;496723;496724;496725;496726;496727;496728;496729;496730;496731 394056;394057;394058;394059;394060;394061;394062;394063;394064;394065;394066;394067;394068;394069;394070 394059 15 VVAEPQTQR Unmodified 1026.5458 0.54580778 3640 Q92615 LARP4B La-related protein 4B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.495 14.657 2 0.0037123 13969 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 101.54 71.038 195320000 0 0 0 13231000 12145000 14280000 11937000 11816000 10300000 22165000 19434000 19334000 18442000 16492000 25741000 58806 3640 52858 496732;496733;496734;496735;496736;496737;496738;496739;496740;496741;496742;496743 394071;394072;394073;394074;394075;394076;394077;394078;394079;394080 394072 10 VVAEPQTQRVQEGK Unmodified 1567.8318 0.83181904 3640 Q92615 LARP4B La-related protein 4B yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 24.409 20.849 3 1.4175E-14 27857 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.19 110.11 22874000 0 20328000 2545900 0 0 0 0 0 0 0 0 0 0 0 0 58807 3640 52859 496744;496745 394081;394082;394083 394082 3 VVAEVGDIPTVLVQNK Unmodified 1679.9458 0.94578617 4989 Q9ULC3 RAB23 Ras-related protein Rab-23 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching 8.4 3.2 1 4 1 1 1 1 1 83.432 82.552 2 1.9752E-45 101842 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 194.96 161.08 152050000 0 134450000 0 0 0 5712600 0 0 0 0 0 0 2628000 2613200 6646800 58808 4989 52860 496746;496747;496748;496749;496750 394084;394085;394086 394085 2 VVAEVYDQER Unmodified 1206.5881 0.58806652 4912 Q9UHX1 PUF60 Poly(U)-binding-splicing factor PUF60 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 34.282 34.523 2 0.00039245 38509 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 138.1 119.72 220620000 0 0 0 17921000 0 0 0 0 19480000 28053000 43255000 0 31469000 35040000 45399000 58809 4912 52861 496751;496752;496753;496754;496755;496756;496757;496758 394087;394088;394089;394090;394091;394092;394093;394094;394095;394096 394096 10 VVAEVYDQERFDNSDLSA Unmodified 2055.9385 0.93852854 4912 Q9UHX1 PUF60 Poly(U)-binding-splicing factor PUF60 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 3 1 1 1 1 1 1 1 1 1 1 1 1 1 71.693 70.665 2 8.4211E-26 86577 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 153.39 138.95 2268700000 0 1826400000 32511000 4716600 25503000 27285000 21930000 21626000 21422000 60729000 51220000 47169000 21130000 37037000 70037000 58810 4912 52862 496759;496760;496761;496762;496763;496764;496765;496766;496767;496768;496769;496770;496771;496772;496773;496774 394097;394098;394099;394100;394101;394102;394103;394104;394105;394106;394107;394108;394109;394110;394111;394112 394101 10 VVAGVANALAHK Unmodified 1148.6666 0.66659162 1967 P68871;P02042 HBB;HBD Hemoglobin subunit beta;LVV-hemorphin-7;Spinorphin;Hemoglobin subunit delta yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 9 2 1 1 2 1 1 1 42.23 42.171 2;3 0.0011254 47956 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 58.889 40.665 105900000 0 0 0 50139000 3682900 5387500 0 37413000 1380700 5778400 0 0 2121100 0 0 58811 1967 52863 496775;496776;496777;496778;496779;496780;496781;496782;496783 394113;394114 394114 2 VVAIYDYTK Unmodified 1070.5648 0.56481189 3297 Q8IZP0 ABI1 Abl interactor 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 57.212 56.419 2 0.012702 63868 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 60.91 44.616 128470000 0 51824000 0 5353700 5326400 5230400 9611100 0 0 7845300 7105000 7801600 6341200 7625100 14405000 58812 3297 52864 496784;496785;496786;496787;496788;496789;496790;496791;496792;496793;496794;496795 394115;394116;394117;394118;394119;394120;394121;394122;394123;394124;394125;394126;394127;394128 394121 14 VVALAEGR Unmodified 813.47085 0.47085192 3362 Q8N6T3 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 26.881 27.154 2 0.03224 29369 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 100.19 25.773 365310000 0 0 0 22702000 0 32504000 29879000 0 0 32360000 47961000 66844000 41536000 38180000 53342000 58813 3362 52865 496796;496797;496798;496799;496800;496801;496802;496803;496804 394129 394129 0 VVALPDHLGNR Unmodified 1189.6568 0.65675521 5209 Q9Y4R8 TELO2 Telomere length regulation protein TEL2 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 51.052 51.119 3 0.0063156 57632 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 39.625 18.925 144000000 0 0 0 9205300 10299000 17273000 9665700 15738000 6811800 17129000 0 0 19874000 15743000 22260000 58814 5209 52866 496805;496806;496807;496808;496809;496810;496811;496812;496813;496814 394130;394131;394132;394133;394134;394135;394136;394137;394138;394139;394140 394131 11 VVALSMSPVDDTFISGSLDK Oxidation (M) 2096.0347 0.034737111 2984 Q6UXN9 WDR82 WD repeat-containing protein 82 yes yes 0 1 0 By matching By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 84.449 84.606 2 1.7463E-20 98110 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 92.468 84.163 23369000 0 0 0 0 0 0 0 0 2223700 4257400 8370500 8517100 0 0 0 58815 2984 52867 496815;496816;496817;496818;496819 394141;394142;394143;394144 394144 4600 4 VVAPNVSLTSAVSQSK Unmodified 1585.8675 0.86753585 970 P12757 SKIL Ski-like protein yes yes 0 0 0 By MS/MS 10 0 1 1 67.859 67.82 2 0.027848 77969 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 43.991 30.872 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58816 970 52868 496820 394145 394145 1 VVAPTISSPVCQEQLVEAGR Unmodified 2139.0994 0.099403054 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 77.09 77.15 2;3 2.7812E-66 89060 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 147.35 126.89 588780000 0 0 0 14937000 28740000 41615000 27698000 33293000 22963000 60651000 54894000 69610000 33470000 66379000 134530000 58817 5187 52869 496821;496822;496823;496824;496825;496826;496827;496828;496829;496830;496831;496832;496833;496834;496835;496836;496837;496838;496839;496840;496841;496842;496843;496844 394146;394147;394148;394149;394150;394151;394152;394153;394154;394155;394156;394157;394158;394159;394160 394147 13 VVAPTISSPVCQEQLVEAGRLVAK Unmodified 2550.384 0.38395776 5187 Q9Y490 TLN1 Talin-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.33 0.471 2 1 1 1 1 86.967 82.372 3 2.6134E-16 101188 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 92.336 88.526 46928000 33355000 3721000 9851400 0 0 0 0 0 0 0 0 0 0 0 0 58818 5187 52870 496845;496846;496847 394161;394162;394163;394164;394165 394165 5 VVAPVESHVPESNQAQGESPAANEGTTVQHPEAPQEEK Unmodified 3976.8675 0.86749545 3999 Q96T58 SPEN Msx2-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 52.133 52.369 4 2.2085E-55 59588 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 74.605 73.097 96170000 0 0 0 0 10739000 0 6344900 10783000 0 12258000 11059000 15931000 9941700 6419900 12693000 58819 3999 52871 496848;496849;496850;496851;496852;496853;496854;496855;496856 394166;394167;394168;394169;394170;394171;394172;394173 394173 8 VVAQEAQSLGGQCVPVVCDSSQESEVR Unmodified 2917.3546 0.35458448 3920 Q96LJ7 DHRS1 Dehydrogenase/reductase SDR family member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.739 70.809 3 3.7135E-31 81400 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 83.312 80.727 96499000 0 0 0 3227100 6847100 6602000 5293200 6906600 5596500 7863600 11236000 15676000 7238900 10960000 9052700 58820 3920 52872 496857;496858;496859;496860;496861;496862;496863;496864;496865;496866;496867;496868 394174;394175;394176;394177;394178;394179;394180;394181;394182;394183;394184;394185;394186;394187 394185 14 VVARSGNIVAGIANESK Unmodified 1683.9268 0.92678206 1612 P49915 GMPS GMP synthase [glutamine-hydrolyzing] yes yes 0 0 1 By MS/MS 2 0 1 1 60.849 52.608 3 0.035557 71140 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 29.125 17.651 133070000 133070000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58821 1612 52873 496869 394188 394188 1 VVASDKETYELR Unmodified 1408.7198 0.71980898 2937 Q6P5R6 RPL22L1 60S ribosomal protein L22-like 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 33.624 33.889 3 0.00055902 36610 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.326 66.547 34998000 0 0 0 0 3068900 0 3010500 3241800 0 4314800 9461400 8501400 0 0 3399400 58822 2937 52874 496870;496871;496872;496873;496874;496875;496876;496877 394189;394190;394191;394192 394190 4 VVASGPGLEHGK Unmodified 1149.6142 0.6142217 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.43 3.14 5 1 24 1 3 2 2 2 2 2 2 2 2 2 2 2 2 2 19.341 18.746 2;3 5.199E-09 23810 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 110.53 89.663 2572200000 91985000 1191600000 996970000 22546000 15187000 25533000 13959000 14413000 10592000 22814000 26393000 34369000 17406000 19981000 68432000 58823 487 52875 496878;496879;496880;496881;496882;496883;496884;496885;496886;496887;496888;496889;496890;496891;496892;496893;496894;496895;496896;496897;496898;496899;496900;496901;496902;496903;496904;496905;496906;496907 394193;394194;394195;394196;394197;394198;394199;394200;394201;394202;394203;394204;394205;394206;394207;394208;394209;394210;394211 394208 12 VVAVAALR Unmodified 797.51232 0.51232281 3212 Q86YV9 HPS6 Hermansky-Pudlak syndrome 6 protein yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 45.258 45.415 2 0.035132 50805 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 52.683 26.574 38275000 0 0 0 0 4548000 6920500 4899300 0 0 5898800 0 6031600 4243500 5733400 0 58824 3212 52876 496908;496909;496910;496911;496912;496913;496914 394212 394212 1 VVAVSDGETK Unmodified 1003.5186 0.51858998 3295 Q8IZH2 XRN1 5'-3' exoribonuclease 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.588 16.767 2 0.0014894 16510 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 90.761 36.212 128030000 0 0 0 5300100 5400500 9083400 9028300 6683400 7379200 10690000 13579000 16830000 12943000 14116000 16996000 58825 3295 52877 496915;496916;496917;496918;496919;496920;496921;496922;496923;496924;496925;496926 394213;394214;394215;394216;394217;394218;394219;394220;394221;394222;394223;394224;394225;394226 394222 14 VVAVSPQMR Oxidation (M) 1001.5328 0.53280025 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 1 0 By matching By matching By MS/MS 10 0 3 1 1 1 22.478 22.815 2 0.013724 23913 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 52.786 12.683 20086000 0 0 0 0 0 0 0 0 0 5836100 5673600 0 8575900 0 0 58826 5189 52878 496927;496928;496929 394227 394227 6588 1 VVCDENGSK Unmodified 1006.439 0.43895945 958;2268 Q13310;P11940 PABPC4;PABPC1 Polyadenylate-binding protein 4;Polyadenylate-binding protein 1 no no 0 0 0 By MS/MS 2 0 1 1 4.8666 1.6262 2 0.014026 3768 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.452 67.677 7178300 0 7178300 0 0 0 0 0 0 0 0 0 0 0 0 0 58827 2268;958 52879 496930 394228 394228 1 VVCLIQNGSFK Unmodified 1263.6645 0.66454271 578 O76094 SRP72 Signal recognition particle subunit SRP72 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 65.686 65.054 2 0.001739 74936 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 86.67 65.769 79862000 16934000 0 0 4150800 4077300 3566200 5950300 8190600 3818700 7222200 7005900 0 7272500 5087600 6585900 58828 578 52880 496931;496932;496933;496934;496935;496936;496937;496938;496939;496940;496941;496942 394229;394230;394231;394232;394233;394234;394235;394236;394237;394238 394238 10 VVCVDYISLDK Unmodified 1309.6588 0.65878863 2688 Q4LE39 ARID4B AT-rich interactive domain-containing protein 4B yes yes 0 0 0 By MS/MS 10 0 1 1 73.256 73.541 2 0.0030714 84748 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 81.338 62.558 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58829 2688 52881 496943 394239 394239 1 VVCVGMNYVDHCK Unmodified 1579.6945 0.69453898 3855 Q96GK7;Q6P2I3 FAHD2A;FAHD2B Fumarylacetoacetate hydrolase domain-containing protein 2A;Fumarylacetoacetate hydrolase domain-containing protein 2B yes no 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 58.014 52.031 3 0.00084602 70593 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.073 71.271 91928000 68244000 15374000 8309800 0 0 0 0 0 0 0 0 0 0 0 0 58830 3855 52882 496944;496945;496946 394240;394241;394242 394240 3 VVCVGMNYVDHCK Oxidation (M) 1595.6895 0.6894536 3855 Q96GK7;Q6P2I3 FAHD2A;FAHD2B Fumarylacetoacetate hydrolase domain-containing protein 2A;Fumarylacetoacetate hydrolase domain-containing protein 2B yes no 0 1 0 By MS/MS 2 0 1 1 40.972 37.362 3 0.001038 47394 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 69.03 61.66 8920800 0 0 8920800 0 0 0 0 0 0 0 0 0 0 0 0 58831 3855 52882 496947 394243 394243 5365 1 VVDALGNAIDGK Unmodified 1170.6245 0.62445203 1192 P25705 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 53.76 53.898 2 2.0536E-05 60233 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 123.79 80.546 232050000 0 0 0 22595000 15473000 17672000 18263000 21232000 15487000 16914000 19464000 21452000 20030000 20166000 23305000 58832 1192 52883 496948;496949;496950;496951;496952;496953;496954;496955;496956;496957;496958;496959 394244;394245;394246;394247;394248;394249;394250;394251;394252;394253;394254;394255;394256;394257;394258 394256 13 VVDALNQGLPR Unmodified 1180.6564 0.65642086 2449 Q14807 KIF22 Kinesin-like protein KIF22 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 2 1 1 1 1 1 1 1 1 56.187 56.31 2 0.00039812 63872 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 86.67 72.901 134040000 0 0 0 5643100 6363500 9263200 15005000 10186000 6340300 15255000 14589000 17005000 10245000 10579000 13563000 58833 2449 52884 496960;496961;496962;496963;496964;496965;496966;496967;496968;496969;496970;496971;496972 394259;394260;394261;394262;394263;394264;394265;394266;394267;394268;394269;394270 394264 12 VVDDDGETIAVLGAGR Unmodified 1585.7948 0.79476484 3497 Q8TD26 CHD6 Chromodomain-helicase-DNA-binding protein 6 yes yes 0 0 0 By MS/MS 10 0 1 1 69.852 70.038 2 0.0030602 79655 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 45.879 32.526 3017500 0 0 0 0 0 0 0 0 0 0 0 0 0 3017500 0 58834 3497 52885 496973 394271 394271 1 VVDDEIYYFR Unmodified 1317.6241 0.62411768 3143 Q86U86 PBRM1 Protein polybromo-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 74.856 74.905 2 0.0091269 86701 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 69.598 47.512 50583000 0 0 0 3363300 3275200 0 0 5059900 0 6967200 5139800 7227700 5025400 4278700 10246000 58835 3143 52886 496974;496975;496976;496977;496978;496979;496980;496981;496982 394272;394273;394274;394275;394276;394277;394278;394279;394280;394281 394277 10 VVDELNLLHTELAK Unmodified 1592.8774 0.87737225 3429 Q8NEU8 APPL2 DCC-interacting protein 13-beta yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 84.979 81.361 3 0.015023 101439 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 28.956 17.265 43851000 0 33635000 10217000 0 0 0 0 0 0 0 0 0 0 0 0 58836 3429 52887 496983;496984 394282 394282 1 VVDESFVDTSPTGPSSADATTSSEELPK Unmodified 2852.3087 0.30872294 5218 Q9Y535 POLR3H DNA-directed RNA polymerase III subunit RPC8 yes yes 0 0 0 By MS/MS 10 0 1 1 73.076 73.232 3 0.0022324 83489 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 37.642 34.88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58837 5218 52888 496985 394283 394283 1 VVDESFVDTSPTGPSSADATTSSEELPKK Unmodified 2980.4037 0.40368596 5218 Q9Y535 POLR3H DNA-directed RNA polymerase III subunit RPC8 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 64.073 64.404 3 2.5192E-63 73639 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 111.4 106.98 20380000 0 0 0 0 0 0 0 0 0 0 5600400 8205000 0 6574700 0 58838 5218 52889 496986;496987;496988 394284;394285;394286 394286 3 VVDFDETWNK Unmodified 1251.5772 0.57716749 2329 Q13617 CUL2 Cullin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.667 63.758 2 0.016021 72870 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 54.191 37.68 63418000 0 0 0 3367300 3609300 7045700 2610200 2770700 2274100 7949400 6378100 6423500 3337400 5512100 12140000 58839 2329 52890 496989;496990;496991;496992;496993;496994;496995;496996;496997;496998;496999;497000 394287 394287 1 VVDHYENPRNVGSLDK Unmodified 1840.9068 0.9067749 4352 Q9H1K1 ISCU Iron-sulfur cluster assembly enzyme ISCU, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS 2 0 4 2 2 41.087 35.945 3;4 0.0039894 45411 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 51.771 42.974 68850000 53908000 0 14941000 0 0 0 0 0 0 0 0 0 0 0 0 58840 4352 52891 497001;497002;497003;497004 394288;394289;394290 394290 2 VVDLAPLHLDAR Unmodified 1317.7405 0.74048484 5245 Q9Y5Q9 GTF3C3 General transcription factor 3C polypeptide 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 1 2 2 1 2 2 2 2 75.036 75.082 2;3 0.00022784 86524 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 81.431 68.801 453610000 0 0 0 17543000 17504000 42728000 23941000 25961000 27579000 44145000 35209000 47849000 35398000 40053000 95698000 58841 5245 52892 497005;497006;497007;497008;497009;497010;497011;497012;497013;497014;497015;497016;497017;497018;497019;497020;497021;497022;497023;497024;497025;497026 394291;394292;394293;394294;394295;394296;394297;394298;394299;394300;394301;394302;394303;394304;394305 394302 13 VVDLEGSLK Unmodified 958.53351 0.53351176 3314 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 51.168 51.464 2 0.0032531 57932 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 90.657 44.939 131120000 0 0 0 0 0 16121000 10323000 9760800 7261600 13067000 16317000 23349000 0 12298000 22619000 58842 3314 52893 497027;497028;497029;497030;497031;497032;497033;497034;497035;497036 394306;394307;394308;394309;394310;394311;394312;394313;394314 394310 9 VVDLLAPYAK Unmodified 1087.6277 0.6277465 823 P06576 ATP5B ATP synthase subunit beta, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By matching 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77.069 76.091 2 0.0014814 87775 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 92.439 67.517 485790000 10658000 293480000 9099600 17838000 11782000 9879500 13693000 17612000 9492300 14009000 12737000 18506000 11131000 13824000 22053000 58843 823 52894 497037;497038;497039;497040;497041;497042;497043;497044;497045;497046;497047;497048;497049;497050;497051 394315;394316;394317;394318;394319;394320;394321 394319 7 VVDLLAQDADIVCR Unmodified 1585.8134 0.81339179 1283 P30520 ADSS Adenylosuccinate synthetase isozyme 2 yes yes 0 0 0 By MS/MS 2 0 1 1 86.002 81.227 2 0.022381 100996 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 53.252 36.226 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58844 1283 52895 497052 394322 394322 1 VVDLLNQAALITNDSK Unmodified 1712.9309 0.93086439 3663 Q92797 SYMPK Symplekin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 1 2 2 1 2 2 2 2 1 2 2 85.035 85.156 2;3 1.993E-23 98670 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 141.32 118.84 195920000 0 0 0 0 8503000 14958000 11851000 12735000 14078000 26793000 20905000 24367000 12365000 16465000 32899000 58845 3663 52896 497053;497054;497055;497056;497057;497058;497059;497060;497061;497062;497063;497064;497065;497066;497067;497068;497069;497070;497071;497072 394323;394324;394325;394326;394327;394328;394329;394330;394331;394332;394333;394334;394335;394336;394337;394338;394339 394324 17 VVDLLSNR Unmodified 914.51853 0.5185304 2776 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 yes yes 0 0 0 By MS/MS 10 0 1 1 51.887 51.357 2 0.035078 58483 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 52.716 18.463 5365000 0 0 0 0 5365000 0 0 0 0 0 0 0 0 0 0 58846 2776 52897 497073 394340 394340 1 VVDLMAHMASK Unmodified 1200.5995 0.59949961 782 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 1 2 1 1 2 2 3 3 2 1 2 53.176 53.423 2;3 0.00083315 59693 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 73.632 62.313 8256600000 0 0 0 120290000 15536000 75764000 26907000 47309000 39997000 80609000 562140000 906760000 56859000 232990000 6091400000 58847 782 52898 497074;497075;497076;497077;497078;497079;497080;497081;497082;497083;497084;497085;497086;497087;497088;497089;497090;497091;497092;497093;497094 394341;394342;394343;394344;394345;394346;394347;394348;394349;394350;394351;394352;394353 394346 11 VVDLMAHMASK Oxidation (M) 1216.5944 0.59441423 782 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 40 3 2 2 3 3 3 2 3 5 3 5 6 35.418 35.695 2;3 0.00089133 39323 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 64.64 54.953 2892200000 0 0 0 166420000 20929000 35084000 45709000 34787000 32644000 41732000 156250000 467220000 42761000 279220000 1569400000 58848 782 52898 497095;497096;497097;497098;497099;497100;497101;497102;497103;497104;497105;497106;497107;497108;497109;497110;497111;497112;497113;497114;497115;497116;497117;497118;497119;497120;497121;497122;497123;497124;497125;497126;497127;497128;497129;497130;497131;497132;497133;497134 394354;394355;394356;394357;394358;394359;394360;394361;394362;394363;394364;394365;394366;394367;394368;394369 394363 946;947 8 VVDLMAHMASK 2 Oxidation (M) 1232.5893 0.58932885 782 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 24.634 24.892 3 0.0013574 21776 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 70.412 53.386 600840000 0 0 0 0 20385000 48230000 27712000 0 22838000 0 186770000 146010000 22587000 103330000 22979000 58849 782 52898 497135;497136;497137;497138;497139;497140;497141;497142;497143 394370;394371;394372;394373 394371 946;947 1 VVDLMAHMASKE Unmodified 1329.6421 0.64209271 782 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 2 1 1 1 1 1 2 2 1 1 3 56.485 56.672 2;3 0.0002436 65665 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 62.891 48.015 1484600000 0 0 0 81055000 15773000 9772600 21261000 47319000 5534600 19589000 208580000 182470000 21977000 109930000 761310000 58850 782 52899 497144;497145;497146;497147;497148;497149;497150;497151;497152;497153;497154;497155;497156;497157;497158;497159;497160 394374;394375;394376;394377;394378;394379;394380;394381 394381 4 VVDLMAHMASKE 2 Oxidation (M) 1361.6319 0.63192195 782 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 0 2 1 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 23.166 23.404 2 1.1509E-05 25034 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 93.258 83.026 119060000 0 0 0 9728800 2498800 828020 0 0 0 2703100 19135000 30551000 3126700 9921400 40565000 58851 782 52899 497161;497162;497163;497164;497165;497166;497167;497168;497169 394382;394383;394384;394385;394386 394386 946;947 4 VVDLMAHMASKE Oxidation (M) 1345.637 0.63700733 782 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 0 1 1 By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 26 4 1 1 1 2 2 3 3 1 3 5 37.747 38.011 2;3 1.2342E-11 39221 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 135.99 114.24 903600000 0 0 0 65461000 4402600 26900000 5753500 17271000 0 10221000 95382000 96759000 7088800 69758000 504610000 58852 782 52899 497170;497171;497172;497173;497174;497175;497176;497177;497178;497179;497180;497181;497182;497183;497184;497185;497186;497187;497188;497189;497190;497191;497192;497193;497194;497195 394387;394388;394389;394390;394391;394392;394393;394394;394395;394396;394397 394390 946;947 2 VVDNTTAK Unmodified 846.4447 0.44469675 4338 Q9H0U4;Q92928 RAB1B;RAB1C Ras-related protein Rab-1B;Putative Ras-related protein Rab-1C yes no 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 5.4671 2.1582 2 0.011975 5213 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.59 44.879 62931000 56970000 5961300 0 0 0 0 0 0 0 0 0 0 0 0 0 58853 4338 52900 497196;497197 394398;394399;394400 394400 3 VVDPETGR Unmodified 871.43995 0.43994572 2848 Q66PJ3 ARL6IP4 ADP-ribosylation factor-like protein 6-interacting protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 14.202 14.359 2 0.035078 12807 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 52.716 25.92 49376000 0 0 0 0 7506500 0 6607500 0 5127000 0 11084000 0 10042000 9008200 0 58854 2848 52901 497198;497199;497200;497201;497202;497203 394401;394402 394401 2 VVDPFSK Unmodified 790.4225 0.42250475 1842 P61247 RPS3A 40S ribosomal protein S3a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 2 1 1 46.216 44.991 2 0.023411 50404 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 91.906 75.359 6077200000 191770000 3712200000 117300000 112630000 0 153970000 166270000 121110000 136810000 190670000 226770000 248470000 248890000 175980000 274420000 58855 1842 52902 497204;497205;497206;497207;497208;497209;497210;497211;497212;497213;497214;497215;497216;497217;497218;497219 394403;394404;394405;394406;394407;394408;394409;394410;394411;394412;394413;394414;394415;394416;394417;394418 394416 16 VVDPIVSNFLQSFETAIEHNK Unmodified 2386.2169 0.21687565 217 O14802 POLR3A DNA-directed RNA polymerase III subunit RPC1 yes yes 0 0 0 By MS/MS 3 0 1 1 101.75 98.19 3 0.00055436 117953 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 48.824 45.585 1684200 0 1684200 0 0 0 0 0 0 0 0 0 0 0 0 0 58856 217 52903 497220 394419 394419 1 VVDPTPEQFQAFR Unmodified 1532.7623 0.7623425 769 P04049 RAF1 RAF proto-oncogene serine/threonine-protein kinase yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 74.405 74.439 2 0.017204 85939 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 56.548 38.489 22430000 0 0 0 0 4021400 0 0 0 0 0 8606600 9802400 0 0 0 58857 769 52904 497221;497222;497223 394420;394421 394420 1 VVDQEQHLPEK Unmodified 1320.6674 0.66737948 3970 Q96RL7 VPS13A Vacuolar protein sorting-associated protein 13A yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 21.607 21.801 3 0.00063146 21620 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.819 57.552 200330000 0 0 0 9392200 12096000 17036000 16061000 17367000 12944000 21856000 15657000 36157000 19244000 0 22521000 58858 3970 52905 497224;497225;497226;497227;497228;497229;497230;497231;497232;497233;497234 394422;394423;394424;394425;394426;394427;394428;394429 394424 8 VVDQPLK Unmodified 797.4647 0.46470391 2916 Q6P1J9 CDC73 Parafibromin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 20.708 20.982 2 0.023018 21480 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 103.29 41.289 666920000 0 0 0 28001000 0 40719000 0 31319000 27484000 67812000 81851000 127040000 108250000 80331000 74114000 58859 2916 52906 497235;497236;497237;497238;497239;497240;497241;497242;497243;497244 394430;394431;394432;394433;394434;394435;394436;394437;394438;394439 394431 10 VVDQQQVER Unmodified 1099.5622 0.56218613 1498 P46100 ATRX Transcriptional regulator ATRX yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.523 14.685 2 1.8119E-05 13997 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 152.47 90.466 143830000 0 0 0 8300800 7036800 7838600 8420400 8630300 6231000 16162000 16264000 17654000 13664000 12984000 20639000 58860 1498 52907 497245;497246;497247;497248;497249;497250;497251;497252;497253;497254;497255;497256 394440;394441;394442;394443;394444;394445;394446;394447;394448;394449;394450;394451 394441 12 VVDRDSEEAEIIR Unmodified 1529.7686 0.76855009 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 0 1 By MS/MS 10 0 1 1 39.361 40.103 3 0.040034 43597 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.005 27.085 10201000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10201000 58861 894 52908 497257 394452 394452 0 VVDRDSEEAEIIRK Unmodified 1657.8635 0.8635131 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 0 2 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.29 6 1 24 4 1 2 2 2 2 2 2 2 2 2 2 2 2 2 34.229 33.393 3;4 8.5671E-32 36427 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 141.85 130.14 4077000000 1122800000 6991600 436350000 184260000 102430000 213500000 170800000 134120000 124210000 254840000 293350000 252290000 225660000 184560000 370840000 58862 894 52909 497258;497259;497260;497261;497262;497263;497264;497265;497266;497267;497268;497269;497270;497271;497272;497273;497274;497275;497276;497277;497278;497279;497280;497281;497282;497283;497284;497285;497286;497287;497288 394453;394454;394455;394456;394457;394458;394459;394460;394461;394462;394463;394464;394465;394466;394467;394468;394469;394470;394471;394472;394473;394474;394475;394476;394477;394478;394479;394480;394481;394482 394459 27 VVDRFVEFLK Unmodified 1250.7023 0.70230842 424 O60684 KPNA6 Importin subunit alpha-7 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 76.837 76.987 3 0.0063155 88263 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.548 43.971 49905000 0 0 0 0 0 5914100 0 4125100 0 5875900 0 6259900 0 4987700 22742000 58863 424 52910 497289;497290;497291;497292;497293;497294 394483;394484 394484 2 VVDSLYNK Unmodified 936.49165 0.49164694 129 O00231 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.42 3.66 3 1 8 1 2 1 1 1 1 1 1 1 1 1 30.343 28.929 2 0.0049521 31078 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 114.43 78.937 1638000000 27821000 923360000 13059000 40958000 59603000 61845000 0 0 0 101620000 122980000 160380000 0 48976000 77447000 58864 129 52911 497295;497296;497297;497298;497299;497300;497301;497302;497303;497304;497305;497306 394485;394486;394487;394488;394489;394490;394491;394492;394493;394494;394495;394496;394497;394498;394499;394500 394495 16 VVDSMEDEVQR Unmodified 1305.5871 0.58708025 5090 Q9Y285 FARSA Phenylalanine--tRNA ligase alpha subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 35.539 35.771 2 0.00030645 39206 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 107.21 78.247 77312000 0 0 0 13115000 0 13544000 0 0 0 0 28444000 0 5623800 5649900 10936000 58865 5090 52912 497307;497308;497309;497310;497311;497312 394501;394502;394503;394504;394505;394506 394503 6 VVDSMEDEVQR Oxidation (M) 1321.582 0.58199487 5090 Q9Y285 FARSA Phenylalanine--tRNA ligase alpha subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 19.047 19.246 2 0.0007833 19283 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 74.464 69.099 23322000 0 0 0 1444000 1834300 2220600 1512800 1416900 1288500 0 3562100 3610200 2424700 1820400 2188100 58866 5090 52912 497313;497314;497315;497316;497317;497318;497319;497320;497321;497322;497323 394507;394508;394509;394510;394511 394510 6490 5 VVDTLYNGK Unmodified 1007.5288 0.52876073 2136 Q07157 TJP1 Tight junction protein ZO-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 32.76 33.105 2 0.0051291 35976 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 82.716 49.201 98033000 0 0 0 0 0 12866000 11664000 0 0 15765000 12645000 12074000 10780000 7790800 14447000 58867 2136 52913 497324;497325;497326;497327;497328;497329;497330;497331;497332;497333 394512;394513;394514;394515;394516;394517;394518;394519 394514 8 VVDVPSHASQSAR Unmodified 1351.6844 0.68442653 1736 P54259 ATN1 Atrophin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 2 1 2 1 2 1 1 1 1 2 2 20.716 20.907 2;3 0.00018134 21148 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 67.964 61.075 291100000 0 0 0 13265000 14436000 19324000 19771000 13991000 19543000 23269000 24255000 43413000 22085000 31436000 46316000 58868 1736 52914 497334;497335;497336;497337;497338;497339;497340;497341;497342;497343;497344;497345;497346;497347;497348;497349;497350 394520;394521;394522;394523;394524;394525;394526;394527;394528;394529;394530;394531;394532;394533;394534 394525 15 VVDVPSHASQSARFNK Unmodified 1740.8907 0.89073091 1736 P54259 ATN1 Atrophin-1 yes yes 0 0 1 By MS/MS 2 0 1 1 40.045 33.422 3 0.019751 46428 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.438 32.524 14327000 14327000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58869 1736 52915 497351 394535 394535 0 VVDYSQFQESDDADEDYGR Unmodified 2236.9033 0.90326525 4349 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 60.569 60.669 2 2.2228E-83 68694 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 173.68 171.65 46253000 0 0 0 4036500 2110600 2757300 3053900 4577900 0 2733900 5090300 3150300 4069400 3055500 11617000 58870 4349 52916 497352;497353;497354;497355;497356;497357;497358;497359;497360;497361;497362 394536;394537;394538;394539;394540;394541;394542 394536 7 VVDYSQFQESDDADEDYGRDSGPPTK Unmodified 2919.2319 0.23186961 4349 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 59.838 58.233 3;4 3.9582E-129 66777 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 175.97 175.47 1198400000 10210000 427740000 20338000 38162000 51791000 36839000 42954000 66494000 48492000 50197000 102250000 62736000 76528000 48446000 115190000 58871 4349 52917 497363;497364;497365;497366;497367;497368;497369;497370;497371;497372;497373;497374;497375;497376;497377;497378;497379 394543;394544;394545;394546;394547;394548;394549;394550;394551;394552;394553;394554;394555;394556;394557;394558;394559;394560;394561;394562;394563;394564;394565;394566;394567;394568 394553 26 VVDYTTAK Unmodified 895.4651 0.46509784 1911 P62820 RAB1A Ras-related protein Rab-1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.31 2.4 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 25.135 25.378 2 0.0060247 17928 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 104.37 82.235 1196700000 0 37774000 0 56125000 69127000 76114000 93959000 91277000 59787000 121060000 137890000 122010000 89575000 93480000 148500000 58872 1911 52918 497380;497381;497382;497383;497384;497385;497386;497387;497388;497389;497390;497391;497392 394569;394570;394571;394572;394573;394574;394575;394576;394577;394578;394579;394580;394581;394582;394583 394581 14 VVEASDRLQR Unmodified 1171.6309 0.63093439 463 O75150 RNF40 E3 ubiquitin-protein ligase BRE1B yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 19.334 19.462 3 0.011928 19764 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 40.496 28.964 66488000 0 0 0 5799000 5469200 4640000 8150800 9586700 6127500 8601400 6866100 11247000 0 0 0 58873 463 52919 497393;497394;497395;497396;497397;497398;497399;497400;497401 394584;394585 394584 2 VVEATNSVTAVR Unmodified 1244.6725 0.67246486 1498 P46100 ATRX Transcriptional regulator ATRX yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 35.657 35.827 2 0.0011772 39966 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 70.028 41.07 62769000 0 0 0 3959600 4935200 8214800 0 0 0 8524400 8999100 10678000 0 0 17458000 58874 1498 52920 497402;497403;497404;497405;497406;497407;497408 394586;394587;394588;394589;394590;394591 394591 5 VVEAVNSDSDSEFGIPK Unmodified 1791.8527 0.85267365 2084 Q02880 TOP2B DNA topoisomerase 2-beta yes yes 0 0 0 By MS/MS 2 0 1 1 72.043 66.316 2 8.1425E-07 84061 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.54 115.89 25192000 0 25192000 0 0 0 0 0 0 0 0 0 0 0 0 0 58875 2084 52921 497409 394592 394592 1 VVEAVVQTR Unmodified 999.57129 0.57129425 2429 Q14678 KANK1 KN motif and ankyrin repeat domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.796 30.985 2 0.0067026 32291 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.376 46.158 118360000 0 0 0 6817700 5499900 11531000 7606900 6626600 7358100 10928000 12759000 17250000 9645700 9683000 12656000 58876 2429 52922 497410;497411;497412;497413;497414;497415;497416;497417;497418;497419;497420;497421 394593;394594;394595;394596;394597;394598;394599;394600;394601;394602;394603 394595 11 VVECKPQPCVVSVEGLSSSTTDAQLK Unmodified 2817.3888 0.38884472 3823 Q96EV2 RBM33 RNA-binding protein 33 yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 73.124 73.012 3 8.2984E-05 84089 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 24.276 16.564 7933200 0 0 0 0 3242500 0 0 4690700 0 0 0 0 0 0 0 58877 3823 52923 497422;497423 394604 394604 1 VVECQLETHNRK Unmodified 1511.7515 0.75146023 4393 Q9H4A3 WNK1 Serine/threonine-protein kinase WNK1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.835 13.997 3 8.6522E-06 13040 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 95.401 90.51 68419000 0 0 0 3122200 3955900 3646100 3887600 4095400 2288200 9490300 5095300 8603300 9481300 5313100 9440600 58878 4393 52924 497424;497425;497426;497427;497428;497429;497430;497431;497432;497433;497434;497435 394605;394606;394607;394608;394609;394610;394611;394612;394613;394614;394615;394616;394617;394618 394616 14 VVEDDEDDFPTTR Unmodified 1536.658 0.65799658 5242 Q9Y5P4 COL4A3BP Collagen type IV alpha-3-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 44.213 44.955 2 0.0045398 49475 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.452 46.113 7692600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7692600 58879 5242 52925 497436;497437;497438 394619;394620;394621 394619 3 VVEDGILK Unmodified 871.50148 0.50148335 1340 P35221 CTNNA1 Catenin alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 39.868 40.142 2 0.02755 45493 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 57.281 11.265 530890000 0 0 0 0 31050000 53455000 0 38384000 0 69715000 74255000 71067000 53343000 47715000 91909000 58880 1340 52926 497439;497440;497441;497442;497443;497444;497445;497446;497447 394622;394623;394624;394625;394626 394626 5 VVEELTR Unmodified 844.46543 0.46543219 2608 Q16531 DDB1 DNA damage-binding protein 1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 25.717 25.802 2 0.024481 27418 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 97.068 39.604 232150000 0 0 0 37160000 0 55529000 39611000 0 37177000 0 62672000 0 0 0 0 58881 2608 52927 497448;497449;497450;497451;497452 394627 394627 1 VVEELTRIH Unmodified 1094.6084 0.60840804 2608 Q16531 DDB1 DNA damage-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 48.324 42.755 2 0.0021973 53201 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 126.41 110.91 827580000 288990000 137380000 401220000 0 0 0 0 0 0 0 0 0 0 0 0 58882 2608 52928 497453;497454;497455;497456 394628;394629;394630;394631;394632;394633 394629 4 VVEEPYTVR Unmodified 1090.5659 0.56587452 465 O75153 CLUH Clustered mitochondria protein homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.152 39.332 2 0.0030483 43564 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 91.318 53.76 189270000 0 0 0 8952600 7000000 14516000 9311500 8479100 8490800 13904000 25671000 26797000 13029000 17431000 35687000 58883 465 52929 497457;497458;497459;497460;497461;497462;497463;497464;497465;497466;497467;497468 394634;394635;394636;394637;394638;394639;394640;394641;394642;394643;394644;394645;394646 394642 13 VVEGFTDEEK Unmodified 1151.5346 0.53463397 2525 Q15386 UBE3C Ubiquitin-protein ligase E3C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 34.078 34.212 2 0.0098813 36452 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.755 64.601 25013000 0 0 0 5168400 0 0 3618600 4273200 0 4922900 0 7030200 0 0 0 58884 2525 52930 497469;497470;497471;497472;497473;497474;497475;497476 394647;394648;394649;394650;394651;394652;394653 394650 6 VVEGPAQAMSR Unmodified 1143.5706 0.57064232 4094 Q9BQE5 APOL2 Apolipoprotein L2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.295 33.479 2 0.00028686 35411 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 86.898 81.239 172510000 0 0 0 7878300 10160000 8590400 10453000 15414000 7723700 15821000 22902000 22787000 18470000 15688000 16625000 58885 4094 52931 497477;497478;497479;497480;497481;497482;497483;497484;497485;497486;497487;497488 394654;394655;394656;394657;394658;394659;394660;394661;394662;394663;394664;394665;394666;394667 394663 13 VVEGPAQAMSR Oxidation (M) 1159.5656 0.56555694 4094 Q9BQE5 APOL2 Apolipoprotein L2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 17.368 17.582 2 0.00020285 16475 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.692 62.337 167650000 0 0 0 0 13902000 0 18175000 17764000 0 20015000 0 42437000 26240000 15154000 13959000 58886 4094 52931 497489;497490;497491;497492;497493;497494;497495;497496 394668;394669 394668 5600 2 VVEGPREVEVVASTAAGAPAQR Unmodified 2192.1549 0.1549441 2839 Q63ZY3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 67.554 67.706 3 0.00014781 77357 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 42.908 34.246 83969000 0 0 0 0 5831500 9360800 6137700 7864700 5117300 9991800 13831000 10085000 0 6036400 9712300 58887 2839 52932 497497;497498;497499;497500;497501;497502;497503;497504;497505;497506 394670;394671;394672;394673;394674;394675;394676;394677;394678;394679;394680 394674 11 VVEGSFVYK Unmodified 1026.5386 0.53859714 1294 P31150 GDI1 Rab GDP dissociation inhibitor alpha yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 51.329 46.484 2 0.034058 60313 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.302 64.992 511940000 0 493830000 18116000 0 0 0 0 0 0 0 0 0 0 0 0 58888 1294 52933 497507;497508 394681;394682 394681 1 VVEIAPAAHLDPQLR Unmodified 1627.9046 0.90459006 951 P11498 PC Pyruvate carboxylase, mitochondrial yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 72.178 72.448 3 0.023686 82750 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 20.543 3.4749 21187000 0 0 0 0 0 0 0 0 0 0 4303000 0 0 5712600 11171000 58889 951 52934 497509;497510;497511 394683 394683 1 VVEIVDEK Unmodified 929.50696 0.50696266 2961 Q6PKG0 LARP1 La-related protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 35.289 35.1 2 0.0068171 38675 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 95.531 48.536 382220000 0 6854500 0 21988000 21114000 35648000 24625000 22857000 28752000 38247000 37845000 39541000 36512000 28151000 40088000 58890 2961 52935 497512;497513;497514;497515;497516;497517;497518;497519;497520;497521;497522;497523;497524 394684;394685;394686;394687;394688;394689;394690;394691;394692;394693;394694;394695;394696;394697;394698;394699;394700 394689 14 VVENLQDDFDFNYK Unmodified 1744.7944 0.79443049 1419 P40763 STAT3 Signal transducer and activator of transcription 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 5 1 2 2 83.4 78.89 2;3 2.4504E-29 99744 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 138.99 129.73 1070200000 27853000 1027600000 14740000 0 0 0 0 0 0 0 0 0 0 0 0 58891 1419 52936 497525;497526;497527;497528;497529 394701;394702;394703;394704 394703 3 VVEQGMFVK Oxidation (M) 1051.5372 0.53721693 5198 Q9Y4E8 USP15 Ubiquitin carboxyl-terminal hydrolase 15 yes yes 0 1 0 By MS/MS By MS/MS 2.4 0.49 3 2 4 1 36.259 31.804 2 0.0075099 40864 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.55 60.174 114350000 0 110540000 3811200 0 0 0 0 0 0 0 0 0 0 0 0 58892 5198 52937 497530;497531;497532;497533;497534 394705;394706;394707;394708;394709 394706 6593 5 VVEQGMFVK Unmodified 1035.5423 0.54230231 5198 Q9Y4E8 USP15 Ubiquitin carboxyl-terminal hydrolase 15 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 48.307 47.266 2 0.027043 52118 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.57 40.721 171540000 0 132770000 3933900 0 2799400 0 0 0 0 4486100 6637900 0 5712700 5079400 10123000 58893 5198 52937 497535;497536;497537;497538;497539;497540;497541;497542 394710;394711 394711 2 VVEQLEK Unmodified 843.47018 0.47018322 4737 Q9NY33 DPP3 Dipeptidyl peptidase 3 yes yes 0 0 0 By matching By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 22.553 18.666 2 0.021131 24578 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.61 33.765 302360000 26429000 269970000 5959200 0 0 0 0 0 0 0 0 0 0 0 0 58894 4737 52938 497543;497544;497545;497546 394712;394713;394714;394715 394712 4 VVERELDALLEQQNTIESK Unmodified 2213.1539 0.15394104 4471 Q9H9E3 COG4 Conserved oligomeric Golgi complex subunit 4 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 83.27 77.959 3 9.6801E-24 96288 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 95.094 86.433 18375000 10917000 0 7457500 0 0 0 0 0 0 0 0 0 0 0 0 58895 4471 52939 497547;497548 394716;394717;394718 394717 3 VVERELISK Unmodified 1071.6288 0.62880913 2330 Q13618 CUL3 Cullin-3 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 34.178 28.741 2 0.024492 40103 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 124.81 15.696 114500000 86369000 28127000 0 0 0 0 0 0 0 0 0 0 0 0 0 58896 2330 52940 497549;497550 394719 394719 0 VVESLRAQDPSEVLTMLTNETGFEISSSDATVK Unmodified 3552.7505 0.75052335 2206 Q12905 ILF2 Interleukin enhancer-binding factor 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 98.266 93.609 3 7.6441E-148 116673 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 147.3 138 74573000 23488000 48554000 2530900 0 0 0 0 0 0 0 0 0 0 0 0 58897 2206 52941 497551;497552;497553;497554 394720;394721;394722 394721 2 VVESPDFSK Unmodified 1006.4971 0.49712625 5301 Q9Y6Y8 SEC23IP SEC23-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 34.168 34.351 2 0.0089939 36718 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.016 38.867 239260000 0 0 0 14503000 10514000 18312000 0 0 18789000 24683000 28259000 39222000 0 30044000 54931000 58898 5301 52942 497555;497556;497557;497558;497559;497560;497561;497562;497563 394723;394724;394725;394726;394727;394728;394729;394730 394725 8 VVESPDFSKDEDYLGK Unmodified 1826.8574 0.85742467 5301 Q9Y6Y8 SEC23IP SEC23-interacting protein yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 63.715 63.042 3 7.1079E-11 80141 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.35 102.03 193730000 0 80493000 0 0 6898300 4735600 12722000 10870000 3911500 11215000 13330000 17233000 9081900 10306000 12937000 58899 5301 52943 497564;497565;497566;497567;497568;497569;497570;497571;497572;497573;497574;497575;497576 394731;394732;394733;394734;394735 394731 5 VVETDPSPYCIVAPDTVIHCEGEPIK Unmodified 2924.3936 0.39359574 1755 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.55 3.8 6 4 12 9 1 1 1 1 1 1 1 1 1 1 1 1 1 83.474 81.787 2;3;4 2.7949E-126 101273 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 160.36 154.76 5195200000 0 4815600000 39683000 1383400 6872500 19016000 6502800 13851000 10920000 24729000 37750000 30768000 6182100 40735000 141250000 58900 1755 52944 497577;497578;497579;497580;497581;497582;497583;497584;497585;497586;497587;497588;497589;497590;497591;497592;497593;497594;497595;497596;497597;497598 394736;394737;394738;394739;394740;394741;394742;394743;394744;394745;394746;394747;394748;394749;394750;394751;394752;394753;394754;394755;394756;394757;394758;394759 394739 23 VVETEDAYK Unmodified 1052.5026 0.50260556 2512 Q15286 RAB35 Ras-related protein Rab-35 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.666 20.87 2 0.0031541 21751 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 92.439 82.302 758130000 0 0 0 41276000 37415000 43999000 46514000 54309000 41621000 66574000 113190000 104950000 69380000 70926000 67979000 58901 2512 52945 497599;497600;497601;497602;497603;497604;497605;497606;497607;497608;497609;497610 394760;394761;394762;394763;394764;394765;394766 394760 6 VVETELQEGATK Unmodified 1302.6667 0.66671078 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 33.653 33.445 2 1.0168E-19 36480 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 158.79 133.91 354950000 0 70805000 0 18321000 20153000 20837000 18916000 22023000 20274000 24176000 34150000 34947000 21653000 20013000 28685000 58902 3443 52946 497611;497612;497613;497614;497615;497616;497617;497618;497619;497620;497621;497622;497623 394767;394768;394769;394770;394771;394772;394773;394774;394775;394776;394777;394778;394779 394773 13 VVEVLAGHGHLYSR Unmodified 1535.8209 0.82086043 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 2 1 2 2 2 1 1 2 2 2 2 1 47.944 48.112 3;4 7.301E-14 53413 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 112.72 104.41 878680000 0 0 0 17470000 5166800 133830000 35690000 40307000 35430000 39093000 54667000 134970000 87777000 77785000 216500000 58903 1565 52947 497624;497625;497626;497627;497628;497629;497630;497631;497632;497633;497634;497635;497636;497637;497638;497639;497640;497641;497642;497643 394780;394781;394782;394783;394784;394785;394786;394787;394788;394789;394790;394791;394792;394793;394794;394795;394796;394797 394791 17 VVFAADGILWPDK Unmodified 1429.7606 0.76055158 159 O00469 PLOD2 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 yes yes 0 0 0 By MS/MS 10 0 1 1 88.516 88.666 2 0.00075647 102621 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.977 53.952 3366300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3366300 58904 159 52948 497644 394798;394799 394798 2 VVFATVR Unmodified 790.47012 0.47012364 5057 Q9UPS6 SETD1B Histone-lysine N-methyltransferase SETD1B yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 42.879 43.219 2 0.030787 48509 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 74.415 16.952 58114000 0 0 0 0 0 6018400 3787100 0 0 11575000 0 15725000 10697000 3107300 7204400 58905 5057 52949 497645;497646;497647;497648;497649;497650;497651 394800;394801 394801 2 VVFCMDR Unmodified 925.41499 0.4149933 4035 Q99615 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 49.119 49.105 2 0.031266 54348 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 73.975 58.754 70136000 0 0 0 4656100 6005300 0 5959400 9281100 0 9608900 18149000 0 0 16476000 0 58906 4035 52950 497652;497653;497654;497655;497656;497657;497658 394802 394802 1 VVFEQTK Unmodified 849.45962 0.45961853 1808 P60174 TPI1 Triosephosphate isomerase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.15 3.84 7 1 5 2 4 2 1 1 1 1 1 25.606 23.878 2 0.022033 28963 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 108.24 67.552 14430000000 847470000 11187000000 556220000 56264000 0 0 0 0 0 0 309410000 330090000 0 227340000 916400000 58907 1808 52951 497659;497660;497661;497662;497663;497664;497665;497666;497667;497668;497669;497670;497671 394803;394804;394805;394806;394807;394808;394809;394810;394811;394812;394813;394814;394815;394816 394808 13 VVFQEFR Unmodified 923.4865 0.48650199 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 57.132 57.252 2 0.018785 65281 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 111.28 74.691 3355700000 0 0 0 244890000 273920000 306930000 248590000 251750000 158320000 273530000 296820000 445950000 296550000 196080000 362410000 58908 1356 52952 497672;497673;497674;497675;497676;497677;497678;497679;497680;497681;497682;497683 394817;394818;394819;394820;394821;394822;394823;394824;394825;394826;394827;394828;394829 394817 12 VVFSLTTEEK Unmodified 1151.6074 0.60740498 3302 Q8N0Z6 TTC5 Tetratricopeptide repeat protein 5 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 68.879 63.602 2 0.022704 81284 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.969 43.875 38158000 0 38158000 0 0 0 0 0 0 0 0 0 0 0 0 0 58909 3302 52953 497684;497685 394830 394830 1 VVFSQQELRK Unmodified 1232.6877 0.68772099 3262 Q8IXL7 MSRB3 Methionine-R-sulfoxide reductase B3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 40.574 38.739 3 0.00063431 41717 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.143 63.567 29966000 11581000 0 0 0 0 0 0 0 0 0 0 8040000 0 0 10344000 58910 3262 52954 497686;497687;497688;497689;497690 394831;394832;394833;394834;394835;394836 394831 6 VVFVFGPDK Unmodified 1006.5488 0.54876789 1261 P30041 PRDX6 Peroxiredoxin-6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 1 1 2 75.505 75.586 2 0.0032698 87024 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 93.162 84.744 1423800000 0 0 0 51535000 30203000 58374000 43310000 52090000 43172000 78801000 168530000 170860000 44981000 128510000 553450000 58911 1261 52955 497691;497692;497693;497694;497695;497696;497697;497698;497699;497700;497701;497702;497703 394837;394838;394839;394840;394841;394842;394843;394844;394845;394846;394847;394848;394849;394850;394851;394852;394853;394854;394855;394856 394847 20 VVFVFGPDKK Unmodified 1134.6437 0.64373091 1261 P30041 PRDX6 Peroxiredoxin-6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 62.339 62.491 2 0.027714 70817 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.679 69.39 82766000 0 0 0 2939000 0 2372800 2941600 6168700 0 3547000 9110300 13558000 2068500 8088600 31972000 58912 1261 52956 497704;497705;497706;497707;497708;497709;497710;497711;497712;497713 394857;394858;394859 394859 3 VVFVGNFLR Unmodified 1049.6022 0.60220045 3511;4466 Q8TE04;Q9H999 PANK1;PANK3 Pantothenate kinase 1;Pantothenate kinase 3 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 83.786 83.76 2 0.00508 96970 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 84.244 79.154 117410000 0 0 0 10552000 18396000 34136000 0 0 0 13805000 12980000 27543000 0 0 0 58913 3511;4466 52957 497714;497715;497716;497717;497718;497719 394860;394861;394862;394863;394864;394865 394863 6 VVGALASQDYR Unmodified 1177.6091 0.60913632 900 P0C7T5 ATXN1L Ataxin-1-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 40.673 40.915 2 0.00053902 45281 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 81.95 69.714 84643000 0 0 0 0 4093900 6962400 5536500 6506700 4980300 7633200 8218700 8993200 9632000 9032000 13054000 58914 900 52958 497720;497721;497722;497723;497724;497725;497726;497727;497728;497729;497730 394866;394867;394868;394869;394870;394871;394872;394873;394874;394875;394876 394871 11 VVGAMQLYSVDRK Oxidation (M) 1480.7708 0.77079869 2040;1723 P53675;Q00610 CLTCL1;CLTC Clathrin heavy chain 2;Clathrin heavy chain 1 no no 0 1 1 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By matching By MS/MS 10 0 15 2 1 1 2 1 2 1 1 1 1 2 45.547 45.692 3 0.00029672 51234 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 64.313 58.694 271550000 0 0 0 20414000 8812900 15963000 28447000 11984000 19636000 15486000 28747000 33968000 23430000 0 64665000 58915 1723;2040 52959 497731;497732;497733;497734;497735;497736;497737;497738;497739;497740;497741;497742;497743;497744;497745 394877;394878;394879;394880;394881;394882 394877 2802 5 VVGAMQLYSVDRK Unmodified 1464.7759 0.77588407 2040;1723 P53675;Q00610 CLTCL1;CLTC Clathrin heavy chain 2;Clathrin heavy chain 1 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 1 1 2 1 1 2 1 1 1 2 56.951 57.175 2;3 9.5277E-05 64111 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.706 53.569 275680000 0 0 0 9500300 0 24173000 12093000 20212000 9926100 19599000 40657000 34665000 14924000 20756000 69178000 58916 1723;2040 52959 497746;497747;497748;497749;497750;497751;497752;497753;497754;497755;497756;497757;497758;497759;497760 394883;394884;394885;394886;394887;394888;394889;394890;394891;394892;394893;394894;394895 394887 13 VVGAQSLK Unmodified 800.4756 0.47560295 1680 P52209 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.87 3.54 4 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 21.897 20.936 1;2 0.0086489 27776 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 114.78 59.342 4951200000 514310000 3967200000 76500000 10653000 5958100 10526000 19576000 18632000 12029000 16696000 81707000 49394000 0 39470000 128580000 58917 1680 52960 497761;497762;497763;497764;497765;497766;497767;497768;497769;497770;497771;497772;497773;497774;497775 394896;394897;394898;394899;394900;394901 394898 5 VVGAVGSDEK Unmodified 959.49238 0.49237523 2454 Q14914 PTGR1 Prostaglandin reductase 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 6.17 3.85 2 1 3 1 2 1 1 1 14.353 12.236 2 1.4651E-09 11929 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 140.14 92.396 1222400000 49952000 1145500000 0 0 0 0 1472200 0 0 0 0 0 0 0 25524000 58918 2454 52961 497776;497777;497778;497779;497780;497781 394902;394903;394904;394905;394906;394907 394903 5 VVGAVIDQGLITR Unmodified 1339.7823 0.78234966 113 E9PRG8 C11orf98 Uncharacterized protein C11orf98 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.945 74.006 2 0.00081299 85363 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 69.979 45.636 136540000 0 0 0 5258200 6641000 9539700 7629200 6305300 8485500 14785000 16306000 19401000 12785000 13009000 16391000 58919 113 52962 497782;497783;497784;497785;497786;497787;497788;497789;497790;497791;497792;497793 394908;394909;394910;394911;394912;394913;394914;394915;394916;394917;394918 394908 11 VVGCARTVGNIEELAAECK Unmodified 2075.014 0.013958865 2980 Q6UWP2 DHRS11 Dehydrogenase/reductase SDR family member 11 yes yes 0 0 1 By MS/MS 2 0 1 1 77.422 69.292 3 3.1486E-07 91221 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.662 59.507 12984000 12984000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58920 2980 52963 497794 394919 394919 1 VVGCSCVVVK Unmodified 1105.5624 0.56238582 1188 P25398 RPS12 40S ribosomal protein S12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 39.113 34.174 2 0.0030212 44383 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.582 78.795 453980000 12413000 438830000 2734700 0 0 0 0 0 0 0 0 0 0 0 0 58921 1188 52964 497795;497796;497797;497798 394920;394921;394922;394923 394920 4 VVGDRENGSDNLPSSAGSGDK Unmodified 2059.9407 0.94065381 325 O43399 TPD52L2 Tumor protein D54 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.89 2.72 3 1 24 1 2 1 2 2 2 2 2 2 2 2 2 2 2 2 26.917 26.461 2;3 3.1371E-21 28609 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 95.957 92.337 897250000 17752000 66258000 6484700 36476000 37583000 99046000 37137000 60699000 66406000 77730000 86647000 106790000 74995000 55379000 67875000 58922 325 52965 497799;497800;497801;497802;497803;497804;497805;497806;497807;497808;497809;497810;497811;497812;497813;497814;497815;497816;497817;497818;497819;497820;497821;497822;497823;497824;497825;497826 394924;394925;394926;394927;394928;394929;394930;394931;394932;394933;394934;394935;394936;394937;394938;394939;394940;394941;394942;394943;394944;394945 394924 21 VVGDRENGSDNLPSSAGSGDKPLSDPAPF Unmodified 2884.3475 0.34750849 325 O43399 TPD52L2 Tumor protein D54 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.39 4 13 2 1 1 1 1 1 2 1 1 1 1 1 1 1 1 72.231 71.354 3 1.6672E-71 82647 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 113.43 110.84 1123800000 22751000 147070000 14626000 45092000 64232000 41683000 57386000 94309000 41437000 85789000 118800000 151150000 74243000 70004000 95176000 58923 325 52966 497827;497828;497829;497830;497831;497832;497833;497834;497835;497836;497837;497838;497839;497840;497841;497842;497843 394946;394947;394948;394949;394950;394951;394952;394953;394954;394955;394956 394954 11 VVGDVAYDEAK Unmodified 1164.5663 0.56626845 953 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.22 3.95 3 2 1 12 3 3 1 1 1 1 1 1 1 1 1 1 1 1 47.417 47.274 2 0.00030645 37798 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 107.21 93.087 3281600000 93336000 2181600000 0 60763000 35749000 74297000 81854000 73845000 93303000 82489000 86550000 104780000 91198000 81242000 140550000 58924 953 52967 497844;497845;497846;497847;497848;497849;497850;497851;497852;497853;497854;497855;497856;497857;497858;497859;497860;497861 394957;394958;394959;394960;394961;394962;394963;394964;394965;394966;394967;394968;394969;394970;394971;394972;394973 394966 17 VVGKPAQLGTQR Unmodified 1252.7252 0.72516913 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 21.926 22.171 3 0.0086708 23181 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 42.031 32.243 104920000 0 0 0 0 10920000 0 16789000 13424000 3095200 12664000 16013000 18176000 0 0 13837000 58925 4285 52968 497862;497863;497864;497865;497866;497867;497868;497869 394974;394975;394976 394974 2 VVGMEESQAAPK Oxidation (M) 1260.602 0.60200203 3512 Q8TE77 SSH3 Protein phosphatase Slingshot homolog 3 yes yes 0 1 0 By MS/MS 2 0 1 1 19.437 15.862 2 0.025363 20921 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 56.632 42.495 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58926 3512 52969 497870 394977 394977 1 VVGPISGADLHGMLEMPDLR 2 Oxidation (M) 2138.05 0.05001002 2075 Q02413 DSG1 Desmoglein-1 yes yes 0 2 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 75.726 75.901 3 1.0783E-05 87161 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 55.337 45.807 87685000 0 0 0 0 0 0 0 30082000 0 8665200 0 13576000 7889300 8383200 19088000 58927 2075 52970 497871;497872;497873;497874;497875;497876 394978 394978 3378;3379 1 VVGQFPFQDIELEK Unmodified 1647.8508 0.85082315 5096 Q9Y2D4 EXOC6B Exocyst complex component 6B yes yes 0 0 0 By MS/MS 2 0 1 1 92.418 87.507 2 1.1024E-05 108638 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.69 79.315 71577000 0 71577000 0 0 0 0 0 0 0 0 0 0 0 0 0 58928 5096 52971 497877 394979 394979 1 VVGSEFVQK Unmodified 991.53385 0.53384611 1482 P43686 PSMC4 26S protease regulatory subunit 6B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.497 37.677 2 0.0051444 40626 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.241 51.737 847760000 0 0 0 47745000 79396000 92284000 30559000 26783000 16016000 132670000 146670000 172810000 28245000 25805000 48776000 58929 1482 52972 497878;497879;497880;497881;497882;497883;497884;497885;497886;497887;497888;497889 394980;394981;394982;394983;394984;394985;394986;394987;394988;394989;394990;394991;394992 394984 10 VVGSELIQK Unmodified 971.56515 0.56514624 1875 P62191 PSMC1 26S protease regulatory subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.839 42.015 2 0.0036487 46452 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 95.531 46.205 2784100000 0 0 0 158150000 215840000 263390000 94466000 84102000 69219000 443530000 442050000 546120000 108650000 120490000 238130000 58930 1875 52973 497890;497891;497892;497893;497894;497895;497896;497897;497898;497899;497900;497901 394993;394994;394995;394996;394997;394998;394999;395000;395001;395002;395003;395004;395005 394998 13 VVGSMPTAGSAGSVPENLNLFPEPGSK Oxidation (M) 2657.3007 0.30068164 3535 Q8WU79 SMAP2 Stromal membrane-associated protein 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 83.177 83.258 3 2.8206E-27 96138 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.111 70.308 147990000 0 0 0 3994500 0 8471000 9665900 0 14902000 24710000 19064000 18222000 13453000 15890000 19619000 58931 3535 52974 497902;497903;497904;497905;497906;497907;497908;497909;497910;497911 395006;395007;395008;395009;395010;395011;395012;395013 395008 5029 8 VVGSMPTAGSAGSVPENLNLFPEPGSK Unmodified 2641.3058 0.30576701 3535 Q8WU79 SMAP2 Stromal membrane-associated protein 2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 86.292 86.469 3 8.992E-08 99958 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.557 40.984 16902000 0 0 0 0 0 0 0 3338700 0 0 0 0 0 0 13564000 58932 3535 52974 497912;497913 395014 395014 1 VVGSSPGHPAVQVESHSGGQK Unmodified 2043.0134 0.013365238 2865 Q6AI39 GLTSCR1L GLTSCR1-like protein yes yes 0 0 0 By MS/MS By matching 2 0 3 2 1 29.82 24.972 3;4 6.9421E-19 35073 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 102.37 100.02 35727000 31942000 0 3785100 0 0 0 0 0 0 0 0 0 0 0 0 58933 2865 52975 497914;497915;497916 395015;395016 395016 2 VVGTIDQLVK Unmodified 1070.6336 0.63356015 3252 Q8IX01 SUGP2 SURP and G-patch domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 63.478 63.572 2 0.043339 72407 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 39.01 22.24 40289000 0 0 0 0 6677600 0 4956100 3542100 4163600 11665000 0 9284700 0 0 0 58934 3252 52976 497917;497918;497919;497920;497921;497922 395017 395017 1 VVGTPEVLR Unmodified 968.56548 0.56548059 4777 Q9NZN4 EHD2 EH domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 47.502 47.666 2 0.0073015 52329 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.789 38.786 232600000 0 0 0 11679000 11298000 24126000 16171000 15776000 0 28288000 23824000 30885000 18962000 19579000 32007000 58935 4777 52977 497923;497924;497925;497926;497927;497928;497929;497930;497931;497932;497933 395018;395019;395020;395021;395022;395023 395019 6 VVGVPVGSALPSTVK Unmodified 1408.829 0.8289655 5000 Q9ULM3 YEATS2 YEATS domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.594 73.662 2 3.9759E-07 85068 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 88.441 77.689 295800000 0 0 0 14730000 33173000 33688000 15666000 14487000 11740000 28257000 37905000 50076000 15986000 21523000 18569000 58936 5000 52978 497934;497935;497936;497937;497938;497939;497940;497941;497942;497943;497944;497945 395024;395025;395026;395027;395028;395029;395030;395031;395032;395033;395034;395035;395036;395037;395038 395038 15 VVGVSDEAELHEMETEK Unmodified 1900.8724 0.87242281 202 O14686 KMT2D Histone-lysine N-methyltransferase 2D yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.64 2.9 1 1 9 2 1 1 1 1 1 1 1 1 1 59.198 58.375 3 1.1006E-06 65725 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.653 64.749 105900000 0 38469000 0 3475700 0 4773200 0 0 4407200 6470000 9375500 8753500 7076000 10133000 12963000 58937 202 52979 497946;497947;497948;497949;497950;497951;497952;497953;497954;497955;497956 395039;395040;395041;395042;395043;395044;395045;395046;395047 395041 9 VVGVSDEAELHEMETEK Oxidation (M) 1916.8673 0.86733743 202 O14686 KMT2D Histone-lysine N-methyltransferase 2D yes yes 0 1 0 By MS/MS 3 0 1 1 45.938 41.103 3 0.0082464 51264 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 42.338 37.857 4577800 0 4577800 0 0 0 0 0 0 0 0 0 0 0 0 0 58938 202 52979 497957 395048 395048 272 0 VVGWSGPVPRPR Unmodified 1305.7306 0.73058886 1663 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 56.702 56.716 3 0.00037761 64525 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 70.942 62.197 62658000 0 0 0 6377200 5306100 0 0 6483800 5910100 8460700 8269800 0 12518000 9332800 0 58939 1663 52980 497958;497959;497960;497961;497962;497963;497964;497965 395049;395050;395051;395052;395053;395054;395055 395051 6 VVHALEEK Unmodified 923.50763 0.50763136 4489 Q9HAU0 PLEKHA5 Pleckstrin homology domain-containing family A member 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 17.154 13.774 2 0.02712 18440 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.728 56.981 22333000 5837000 6396700 10099000 0 0 0 0 0 0 0 0 0 0 0 0 58940 4489 52981 497966;497967;497968 395056;395057 395056 2 VVHIEQGGLVKPER Unmodified 1559.8784 0.87837531 2041 Q00613 HSF1 Heat shock factor protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 1 1 1 2 1 2 1 2 1 1 2 40.036 40.284 3;4 0.031787 44030 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 36.022 28.983 182750000 0 0 0 6834400 6742200 10806000 10526000 16337000 7416400 19064000 13908000 27394000 12685000 10878000 40158000 58941 2041 52982 497969;497970;497971;497972;497973;497974;497975;497976;497977;497978;497979;497980;497981;497982;497983;497984 395058;395059 395059 1 VVHIIQSR Unmodified 950.56615 0.56614929 441;2493 O60885;Q15059 BRD4;BRD3 Bromodomain-containing protein 4;Bromodomain-containing protein 3 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.856 24.061 2 0.041524 24151 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 49.933 27.311 59252000 0 0 0 2888900 3059400 2870800 3676300 3814900 3503800 5955300 5100300 8783600 4300600 4163500 11135000 58942 441;2493 52983 497985;497986;497987;497988;497989;497990;497991;497992;497993;497994;497995;497996 395060 395060 1 VVHIIQSREPSLK Unmodified 1504.8726 0.87256165 441 O60885 BRD4 Bromodomain-containing protein 4 yes yes 0 0 1 By matching By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 42.354 42.826 3 0.042122 46627 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 25.731 15.378 22817000 0 0 0 0 0 0 3150100 0 0 0 3964000 3407200 3800700 0 8495100 58943 441 52984 497997;497998;497999;498000;498001 395061 395061 1 VVHIMDFQR Oxidation (M) 1159.5808 0.58081308 1473 P43243 MATR3 Matrin-3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 41.205 41.383 2;3 0.0037059 45217 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 60.398 50.089 2067600000 0 0 0 107870000 101920000 158250000 159410000 228760000 157990000 169880000 161600000 249910000 231450000 139750000 200800000 58944 1473 52985 498002;498003;498004;498005;498006;498007;498008;498009;498010;498011;498012;498013;498014;498015;498016;498017;498018;498019;498020;498021;498022;498023;498024;498025 395062;395063;395064;395065;395066;395067;395068;395069;395070;395071;395072;395073;395074;395075;395076;395077;395078;395079;395080;395081;395082;395083;395084 395074 2315 11 VVHIMDFQR Unmodified 1143.5859 0.58589846 1473 P43243 MATR3 Matrin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 29 2 2 3 2 2 3 3 2 3 2 2 3 56.788 56.944 2;3 0.0019482 64526 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 91.867 82.509 2143700000 0 0 0 82132000 67391000 213660000 126920000 184160000 179500000 136900000 170970000 269360000 162990000 158150000 391530000 58945 1473 52985 498026;498027;498028;498029;498030;498031;498032;498033;498034;498035;498036;498037;498038;498039;498040;498041;498042;498043;498044;498045;498046;498047;498048;498049;498050;498051;498052;498053;498054 395085;395086;395087;395088;395089;395090;395091;395092;395093;395094;395095;395096;395097;395098;395099;395100;395101;395102;395103;395104;395105;395106 395085 20 VVHLSQEINHLQK Unmodified 1543.8471 0.84707518 4580 Q9NQX4 MYO5C Unconventional myosin-Vc yes yes 0 0 0 By MS/MS 10 0 1 1 43.558 44.311 3 0.01555 49177 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 40.287 26.624 21331000 0 0 0 0 0 0 0 0 0 0 0 21331000 0 0 0 58946 4580 52986 498055 395107 395107 1 VVHNTALDPVHQPPPPPATLK Unmodified 2227.2113 0.21133676 4775 Q9NZM4 GLTSCR1 Glioma tumor suppressor candidate region gene 1 protein yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 65.064 59.036 4 0.00016835 79474 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.602 55.475 17744000 14729000 0 3014600 0 0 0 0 0 0 0 0 0 0 0 0 58947 4775 52987 498056;498057 395108;395109 395109 2 VVHRTATADDK Unmodified 1211.6258 0.62584901 1102;3900 P20290;Q96K17 BTF3;BTF3L4 Transcription factor BTF3;Transcription factor BTF3 homolog 4 no no 0 0 1 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 3 2 1 5.0859 1.917 2;3 1.4537E-15 5311 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 184.24 151.92 28012000000 27030000000 935920000 46556000 0 0 0 0 0 0 0 0 0 0 0 0 58948 1102;3900 52988 498058;498059;498060;498061;498062;498063 395110;395111;395112;395113;395114;395115;395116 395113 6 VVHVNGYGK Unmodified 971.51886 0.51886475 890 P09622 DLD Dihydrolipoyl dehydrogenase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 21.261 17.456 2 0.012217 22035 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 84.244 59.612 56798000 46177000 0 10621000 0 0 0 0 0 0 0 0 0 0 0 0 58949 890 52989 498064;498065 395117;395118 395118 1 VVIARPTPPQAR Unmodified 1303.7725 0.77245367 1502 P46379 BAG6 Large proline-rich protein BAG6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.019 39.199 3 0.0025783 43636 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 79.82 71.909 774440000 0 0 0 38896000 46000000 55625000 50397000 59155000 41688000 72534000 66188000 102570000 77382000 71623000 92390000 58950 1502 52990 498066;498067;498068;498069;498070;498071;498072;498073;498074;498075;498076;498077 395119;395120;395121;395122;395123;395124;395125;395126;395127 395120 2 VVIDAFR Unmodified 818.46504 0.46503826 161 O00487 PSMD14 26S proteasome non-ATPase regulatory subunit 14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.404 56.53 2 0.015564 64398 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 117.7 81.112 438970000 0 0 0 25652000 40980000 39312000 16997000 23873000 10934000 64177000 67940000 73618000 17445000 17968000 40074000 58951 161 52991 498078;498079;498080;498081;498082;498083;498084;498085;498086;498087;498088;498089 395128;395129;395130;395131;395132;395133;395134;395135;395136;395137 395128 10 VVIEFNK Unmodified 847.48035 0.48035398 1004 P14649 MYL6B Myosin light chain 6B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 49.828 49.992 2 0.020823 55287 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.74 62.771 132130000 0 0 0 10480000 11617000 0 11560000 10611000 0 15976000 12545000 19192000 10424000 8061400 21662000 58952 1004 52992 498090;498091;498092;498093;498094;498095;498096;498097;498098;498099 395138;395139;395140;395141;395142;395143;395144;395145 395140 8 VVIFQQEQENK Unmodified 1360.6987 0.69867961 1941 P63151 PPP2R2A Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.745 46.912 2 1.0608E-36 52348 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 202.21 138.54 289480000 0 0 0 17543000 15133000 20656000 15799000 13169000 0 24710000 39609000 44379000 16981000 19202000 62303000 58953 1941 52993 498100;498101;498102;498103;498104;498105;498106;498107;498108;498109;498110;498111 395146;395147;395148;395149;395150;395151;395152;395153;395154;395155;395156;395157 395155 12 VVIGMDVAASEFFR Oxidation (M) 1555.7705 0.77046434 827 P06733 ENO1 Alpha-enolase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.5 3.55 2 2 8 2 1 1 1 2 2 1 2 85.029 83.647 2;3 8.7755E-14 97209 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 111.86 76.314 249480000 21631000 3248400 11918000 3804000 0 0 0 0 0 0 35258000 40751000 0 24310000 108560000 58954 827 52994 498112;498113;498114;498115;498116;498117;498118;498119;498120;498121;498122;498123 395158;395159;395160;395161;395162;395163;395164;395165;395166 395163 1000 9 VVIGMDVAASEFFRSGK Oxidation (M) 1827.9189 0.91891949 827 P06733 ENO1 Alpha-enolase yes yes 0 1 1 By MS/MS 3 0 1 1 82.177 78.485 3 0.0013355 79099 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 85.734 81.265 14735000 14735000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58955 827 52995 498124 395167 395167 1000 0 VVIGMDVAASEFFRSGKYDLDFK Unmodified 2593.2887 0.28866039 827 P06733 ENO1 Alpha-enolase yes yes 0 0 2 By MS/MS 2 0 1 1 97.409 89.279 4 0.00072597 115291 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.353 42.282 9608100 9608100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 58956 827 52996 498125 395168 395168 1 VVIIGAGKPAAVVLQTK Unmodified 1663.0396 0.039626976 2441 Q14697 GANAB Neutral alpha-glucosidase AB yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 73.802 73.865 3 6.1094E-05 84449 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.141 73.451 76778000 0 0 0 4751600 3138200 0 5062300 6330600 0 5302200 7760800 14377000 2904800 6640100 20511000 58957 2441 52997 498126;498127;498128;498129;498130;498131;498132;498133;498134;498135 395169;395170;395171;395172;395173;395174 395171 6 VVINGQEVK Unmodified 984.5604 0.56039521 896 P09960 LTA4H Leukotriene A-4 hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.87 3 5 1 1 1 1 1 1 1 1 33.011 31.413 2 0.0051115 33447 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.265 28.715 939760000 25676000 777190000 5851600 12638000 0 0 0 0 0 0 25884000 24121000 0 16250000 52146000 58958 896 52998 498136;498137;498138;498139;498140;498141;498142;498143 395175;395176;395177;395178;395179;395180;395181 395176 5 VVINVPIFK Unmodified 1027.643 0.64300263 1540 P48506 GCLC Glutamate--cysteine ligase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 85.619 84.118 2 0.0061449 97468 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.854 71.12 38131000 18865000 0 0 0 0 0 0 0 0 0 3505400 3444000 0 2039200 10278000 58959 1540 52999 498144;498145;498146;498147;498148 395182;395183;395184;395185;395186 395182 5 VVIQEMLK Oxidation (M) 974.54705 0.54705333 1425 P40938 RFC3 Replication factor C subunit 3 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.199 41.377 2 0.0069175 44917 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 79.451 45.901 154040000 0 0 0 8433400 10934000 12840000 11738000 7757300 11472000 16137000 17024000 17967000 13762000 13255000 12717000 58960 1425 53000 498149;498150;498151;498152;498153;498154;498155;498156;498157;498158;498159;498160 395187;395188;395189;395190;395191;395192 395190 2245 6 VVIQEMLK Unmodified 958.55214 0.55213871 1425 P40938 RFC3 Replication factor C subunit 3 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 63.512 63.688 2 0.015851 72924 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 68.214 30.606 64722000 0 0 0 0 0 0 0 13896000 10798000 0 0 0 18738000 21290000 0 58961 1425 53000 498161;498162;498163;498164 395193;395194;395195 395195 3 VVIQSNDDIASR Unmodified 1315.6732 0.67319314 3701 Q93008 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 2 1 1 38.347 38.539 2 1.1894E-05 42477 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 112.36 87.435 250760000 0 0 0 12124000 12587000 22267000 16844000 14932000 9251300 20872000 27611000 28300000 25489000 22769000 37710000 58962 3701 53001 498165;498166;498167;498168;498169;498170;498171;498172;498173;498174;498175;498176;498177 395196;395197;395198;395199;395200;395201;395202;395203;395204;395205 395204 9 VVIQTIPTVMPASTENGDK Unmodified 1999.0296 0.029592154 2567 Q15723 ELF2 ETS-related transcription factor Elf-2 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 78.408 78.512 2 1.0628E-05 90805 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 90.731 85.238 63318000 0 0 0 0 2416100 4359600 4104800 6334200 3168200 7064200 9096900 8162900 4923500 5828700 7858900 58963 2567 53002 498178;498179;498180;498181;498182;498183;498184;498185;498186;498187;498188 395206;395207;395208;395209;395210;395211;395212;395213 395212 8 VVIQTIPTVMPASTENGDK Oxidation (M) 2015.0245 0.024506776 2567 Q15723 ELF2 ETS-related transcription factor Elf-2 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 70.751 70.836 2 2.9026E-06 81363 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 72.29 62.239 43003000 0 0 0 0 4521800 3517600 5124700 3795000 4176300 5058100 0 7597600 4558400 4653900 0 58964 2567 53002 498189;498190;498191;498192;498193;498194;498195;498196;498197 395214;395215;395216;395217;395218;395219 395218 4220 5 VVITVQQLSNK Unmodified 1227.7187 0.71868677 2752 Q5R372 RABGAP1L Rab GTPase-activating protein 1-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 60.34 59.816 2 0.00087155 68214 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 87.913 53.381 60330000 15968000 0 0 0 1706200 5106300 2718600 2418800 1979700 5994800 4943800 3635900 3800900 3626200 8431500 58965 2752 53003 498198;498199;498200;498201;498202;498203;498204;498205;498206;498207;498208;498209 395220;395221;395222;395223;395224;395225;395226;395227;395228;395229;395230;395231 395220 11 VVIVDPETGK Unmodified 1055.5863 0.58627561 2501 Q15149 PLEC Plectin yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 44.277 44.575 2 0.017268 49605 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 49.06 24.905 63548000 0 0 0 0 10661000 0 0 0 0 13722000 0 18879000 9979800 0 10307000 58966 2501 53004 498210;498211;498212;498213;498214;498215 395232;395233;395234 395234 3 VVIVDPETNK Unmodified 1112.6077 0.60773933 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.754 42.93 2 0.00072454 47246 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 120.87 83.709 1645700000 0 0 0 371500000 81259000 60396000 93589000 302150000 62942000 85164000 145730000 155110000 137700000 68499000 81655000 58967 1029 53005 498216;498217;498218;498219;498220;498221;498222;498223;498224;498225;498226;498227 395235;395236;395237;395238;395239;395240;395241;395242;395243;395244;395245;395246;395247;395248 395246 14 VVIVNPETK Unmodified 997.5808 0.5807963 4808 Q9P265 DIP2B Disco-interacting protein 2 homolog B yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 39.3 39.768 2 0.0095702 43000 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.351 31.543 51314000 0 0 0 0 0 8517800 0 0 0 0 0 13105000 8959500 0 20731000 58968 4808 53006 498228;498229;498230;498231 395249;395250;395251 395250 3 VVIYDPDWNPSTDTQAR Unmodified 1975.9276 0.92756992 2097 Q03468 ERCC6 DNA excision repair protein ERCC-6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 76.32 76.334 2 1.1489E-13 87753 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 116.01 101.32 46932000 0 0 0 3121100 5355600 5744900 4569700 5048400 0 7694300 7434700 0 0 0 7963500 58969 2097 53007 498232;498233;498234;498235;498236;498237;498238;498239 395252;395253;395254;395255;395256;395257;395258;395259;395260 395255 9 VVLAEVIQAFSAPENAVR Unmodified 1912.0418 0.04181182 4037 Q99622 C12orf57 Protein C10 yes yes 0 0 0 By MS/MS 10 0 1 1 96.841 97.003 2 0.0012906 112568 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.563 59.33 1575200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1575200 58970 4037 53008 498240 395261 395261 1 VVLAITDLSLPLGR Unmodified 1465.8868 0.88681473 500 O75448 MED24 Mediator of RNA polymerase II transcription subunit 24 yes yes 0 0 0 By MS/MS 10 0 1 1 95.308 95.455 2 0.0087284 110740 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.314 46.36 810830 0 0 0 0 0 0 0 0 0 0 0 0 0 0 810830 58971 500 53009 498241 395262 395262 1 VVLAPEEK Unmodified 883.50148 0.50148335 1406 P39880 CUX1 Homeobox protein cut-like 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 30.458 30.624 2 0.0066594 33302 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 98.997 73.546 183650000 0 0 0 0 20429000 0 0 21103000 20544000 27503000 32117000 0 37550000 24406000 0 58972 1406 53010 498242;498243;498244;498245;498246;498247;498248 395263;395264;395265;395266;395267;395268 395265 5 VVLASQPDLECGFSR Unmodified 1676.8192 0.81920545 4818 Q9P2I0 CPSF2 Cleavage and polyadenylation specificity factor subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 72.947 73.003 2 7.1683E-20 83517 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 119.76 103.51 83343000 0 0 0 3800000 4762400 6342800 0 3339300 5968700 8030200 9259400 11590000 9093300 9780100 11377000 58973 4818 53011 498249;498250;498251;498252;498253;498254;498255;498256;498257;498258;498259 395269;395270;395271;395272;395273;395274;395275;395276;395277;395278;395279 395271 11 VVLASSSPVFK Unmodified 1132.6492 0.64921022 2374 Q14145 KEAP1 Kelch-like ECH-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.078 62.177 2 0.0078133 71229 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 53.089 31.801 74578000 0 0 0 4304700 4149400 6557800 5216800 4387500 3750300 5466300 9039500 8573300 7232800 7019000 8880700 58974 2374 53012 498260;498261;498262;498263;498264;498265;498266;498267;498268;498269;498270;498271 395280;395281 395280 2 VVLAYEPVWAIGTGK Unmodified 1601.8817 0.88172935 1808 P60174 TPI1 Triosephosphate isomerase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.21 3.75 8 2 18 4 3 3 2 1 1 1 1 1 2 2 2 1 2 2 89.894 88.537 2;3 1.8832E-19 102855 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 110.86 84.918 6986800000 4495500000 1389000000 185460000 8169700 2665200 4756000 1632400 4128800 0 7058400 110680000 126160000 3231700 72495000 575890000 58975 1808 53013 498272;498273;498274;498275;498276;498277;498278;498279;498280;498281;498282;498283;498284;498285;498286;498287;498288;498289;498290;498291;498292;498293;498294;498295;498296;498297;498298;498299 395282;395283;395284;395285;395286;395287;395288;395289;395290;395291;395292;395293;395294;395295;395296;395297;395298;395299;395300;395301;395302;395303;395304;395305;395306;395307;395308;395309;395310 395283 25 VVLDAITQELERK Unmodified 1512.8512 0.8511575 4763 Q9NZC9 SMARCAL1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 81.033 79.532 3 0.00069719 100673 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.466 60.828 40097000 7899500 13898000 0 0 0 2469400 1439100 2359200 0 0 3098000 0 0 2446300 6487000 58976 4763 53014 498300;498301;498302;498303;498304;498305;498306;498307 395311;395312;395313 395311 2 VVLEAPDETTLK Unmodified 1313.7078 0.70784731 2878 Q6GMV3 PTRHD1 Putative peptidyl-tRNA hydrolase PTRHD1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 65.9 60.225 2 1.5295E-07 79940 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 119.22 97.696 811960000 25402000 782370000 4189700 0 0 0 0 0 0 0 0 0 0 0 0 58977 2878 53015 498308;498309;498310;498311 395314;395315;395316;395317 395316 4 VVLEAPLITESALEVVR Unmodified 1837.0561 0.056064901 3663 Q92797 SYMPK Symplekin yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 95.106 95.239 2 0.039848 110663 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 37.426 31.819 2049300 0 0 0 0 0 0 0 0 0 1163900 0 0 0 0 885460 58978 3663 53016 498312;498313 395318 395318 1 VVLEAPLITESALEVVRK Unmodified 1965.151 0.15102792 3663 Q92797 SYMPK Symplekin yes yes 0 0 1 By MS/MS By MS/MS 6 4 1 1 1 1 93.608 89.612 3 1.3645E-06 114627 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 92.307 86.727 18415000 15489000 0 0 0 0 0 0 0 0 0 0 0 0 0 2926300 58979 3663 53017 498314;498315 395319;395320 395320 2 VVLEENGEK Unmodified 1015.5186 0.51858998 2977 Q6UVJ0 SASS6 Spindle assembly abnormal protein 6 homolog yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 20.597 20.837 2 0.01612 21712 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 56.81 40.666 140270000 0 0 0 0 7628900 0 10966000 17529000 0 0 23500000 0 26151000 18714000 35786000 58980 2977 53018 498316;498317;498318;498319;498320;498321;498322 395321;395322 395321 1 VVLEGPAPWGFR Unmodified 1326.7085 0.70845643 4585 Q9NR12 PDLIM7 PDZ and LIM domain protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 83.241 83.384 2 0.0049462 96178 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.898 48.796 21537000 0 0 0 0 0 0 1020800 0 0 4887400 0 0 0 3325400 12304000 58981 4585 53019 498323;498324;498325;498326;498327;498328 395323;395324;395325;395326 395324 4 VVLEHEEVR Unmodified 1108.5877 0.58767259 5267 Q9Y678 COPG1 Coatomer subunit gamma-1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.16 26.361 2 0.0077155 28041 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 71.692 48.263 69041000 0 0 0 3925200 2977300 7727300 5941900 4292900 2370200 7031700 8315800 7169400 7653700 5746000 5889400 58982 5267 53020 498329;498330;498331;498332;498333;498334;498335;498336;498337;498338;498339;498340 395327;395328;395329;395330 395329 4 VVLEHEEVRAGAVSALAK Unmodified 1877.0371 0.037060793 5267 Q9Y678 COPG1 Coatomer subunit gamma-1 yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 55.953 56.563 3 0.013103 63511 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 29.664 22.532 14427000 0 0 0 0 0 0 0 0 0 0 0 7309700 0 0 7117200 58983 5267 53021 498341;498342 395331 395331 1 VVLEPDSR Unmodified 913.4869 0.48689592 4822 Q9P2N5 RBM27 RNA-binding protein 27 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 28.467 28.722 2 0.042907 30430 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 49.442 32.046 34451000 0 0 0 0 2787000 0 2596300 3222300 2109500 4155600 5646500 7719000 3509700 0 2705400 58984 4822 53022 498343;498344;498345;498346;498347;498348;498349;498350;498351 395332 395332 1 VVLESPWPSSTR Unmodified 1356.7038 0.70376498 2830 Q5VZ89 DENND4C DENN domain-containing protein 4C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 71.543 71.722 2 0.014903 82191 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 43.297 14.341 33263000 0 0 0 0 0 5980100 0 0 5016000 0 9344200 12923000 0 0 0 58985 2830 53023 498352;498353;498354;498355;498356 395333;395334;395335 395335 3 VVLGEFGVR Unmodified 974.55492 0.5549159 260 O15160 POLR1C DNA-directed RNA polymerases I and III subunit RPAC1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 69.276 69.42 2 0.036463 80150 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 78.324 47.82 159040000 0 0 0 0 7878700 13551000 9805800 8977900 8582600 14374000 18905000 21970000 13414000 15402000 26179000 58986 260 53024 498357;498358;498359;498360;498361;498362;498363;498364;498365;498366;498367 395336 395336 0 VVLIGDSGVGK Unmodified 1042.6023 0.60226003 2593 Q15907;P62491 RAB11B;RAB11A Ras-related protein Rab-11B;Ras-related protein Rab-11A yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 54.222 52.639 2 0.00029057 60900 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 103.55 41.083 6395100000 57629000 1376500000 43474000 153890000 153210000 412660000 210520000 236190000 276520000 473830000 827250000 651990000 515810000 245090000 760550000 58987 2593 53025 498368;498369;498370;498371;498372;498373;498374;498375;498376;498377;498378;498379;498380;498381;498382;498383;498384 395337;395338;395339;395340;395341;395342;395343;395344;395345;395346;395347;395348;395349;395350;395351;395352;395353 395353 13 VVLIGGKPDR Unmodified 1052.6342 0.63422886 1868 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.532 33.715 2 0.02431 36007 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 112.84 87.919 530560000 0 0 0 22234000 18672000 63630000 29488000 19775000 13625000 60860000 58723000 70783000 36159000 38439000 98172000 58988 1868 53026 498385;498386;498387;498388;498389;498390;498391;498392;498393;498394;498395;498396 395354;395355 395354 0 VVLIVGETGSGK Unmodified 1157.6656 0.66558856 4421 Q9H6S0 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 55.258 55.416 2 0.0064992 62658 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 51.268 36.117 35624000 0 0 0 0 2380500 2516300 2457400 0 0 4509000 4844600 9229600 5831800 3854900 0 58989 4421 53027 498397;498398;498399;498400;498401;498402;498403;498404 395356;395357;395358;395359;395360;395361 395360 6 VVLLGAPNAGK Unmodified 1037.6233 0.62332982 525 O75616 ERAL1 GTPase Era, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 53.271 53.26 2 0.012409 59224 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 47.574 22.756 50813000 0 0 0 5672200 3857600 0 7687300 3787600 0 0 0 0 0 8823200 20985000 58990 525 53028 498405;498406;498407;498408;498409;498410 395362;395363;395364;395365;395366 395365 4 VVLLGEGCVGK Unmodified 1129.6165 0.61652988 4984 Q9UL25 RAB21 Ras-related protein Rab-21 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 59.476 57.899 2 0.014628 66472 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 45.368 30.217 50695000 0 22657000 1200100 0 7581600 0 0 6277900 2799900 0 10179000 0 0 0 0 58991 4984 53029 498411;498412;498413;498414;498415;498416;498417 395367;395368;395369;395370;395371 395371 5 VVLLHGPPGTGK Unmodified 1173.687 0.68699271 2557 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 44.615 44.787 2;3 5.2799E-06 50390 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 128.35 117.71 1494600000 0 0 0 71505000 77242000 153510000 139900000 105180000 64929000 147460000 122990000 135300000 146840000 144200000 185580000 58992 2557 53030 498418;498419;498420;498421;498422;498423;498424;498425;498426;498427;498428;498429;498430;498431;498432;498433;498434;498435;498436;498437;498438;498439;498440;498441 395372;395373;395374;395375;395376;395377;395378;395379;395380;395381;395382;395383;395384;395385;395386;395387;395388;395389;395390;395391;395392;395393;395394;395395;395396;395397;395398;395399;395400;395401;395402 395379 28 VVLLTEVDK Unmodified 1014.5961 0.59611202 1425 P40938 RFC3 Replication factor C subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63.136 62.021 2 0.0032531 71118 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 90.657 61.507 902310000 20318000 104290000 11805000 36049000 44094000 60970000 53835000 52995000 53884000 78199000 80104000 91666000 63226000 51087000 99781000 58993 1425 53031 498442;498443;498444;498445;498446;498447;498448;498449;498450;498451;498452;498453;498454;498455;498456 395403;395404;395405;395406;395407;395408;395409;395410;395411;395412;395413;395414;395415 395403 10 VVLLTGETSTDLK Unmodified 1374.7606 0.76061116 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.85 3.86 7 1 12 2 5 1 1 1 1 1 1 1 1 1 1 1 1 1 68.991 67.156 2 1.0147E-22 85227 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 152.07 132.08 1866800000 85653000 1436100000 26806000 10327000 16904000 29630000 21131000 24891000 17275000 32872000 34443000 35700000 23763000 26712000 44590000 58994 528 53032 498457;498458;498459;498460;498461;498462;498463;498464;498465;498466;498467;498468;498469;498470;498471;498472;498473;498474;498475;498476 395416;395417;395418;395419;395420;395421;395422;395423;395424;395425;395426;395427;395428;395429;395430;395431;395432;395433;395434;395435;395436;395437;395438;395439 395422 22 VVLMQCNIESVEEGVK Unmodified 1832.9012 0.90122052 4913 Q9UHY1 NRBP1 Nuclear receptor-binding protein yes yes 0 0 0 By MS/MS By matching 2.33 0.471 2 1 2 1 80.751 77.214 2 1.01E-06 95932 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.38 77.69 139540000 0 136970000 2574400 0 0 0 0 0 0 0 0 0 0 0 0 58995 4913 53033 498477;498478;498479 395440;395441 395440 2 VVLMQCNIESVEEGVK Oxidation (M) 1848.8961 0.89613514 4913 Q9UHY1 NRBP1 Nuclear receptor-binding protein yes yes 0 1 0 By MS/MS 2.5 0.5 1 1 2 73.747 69.196 2 1.4114E-38 86809 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 155.15 144.25 46669000 0 46669000 0 0 0 0 0 0 0 0 0 0 0 0 0 58996 4913 53033 498480;498481 395442 395442 6273 0 VVLNMNLTPTQGSYTFDPVTK Unmodified 2324.1722 0.17223365 5117 Q9Y2T2 AP3M1 AP-3 complex subunit mu-1 yes yes 0 0 0 By MS/MS 2 0 1 1 91.612 86.701 3 0.00030916 107743 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 32.035 24.043 26255000 0 26255000 0 0 0 0 0 0 0 0 0 0 0 0 0 58997 5117 53034 498482 395443;395444 395443 2 VVLPCSVQEYQVGQLYSVAEASK Unmodified 2553.2785 0.27848963 1554 P48739 PITPNB Phosphatidylinositol transfer protein beta isoform yes yes 0 0 0 By MS/MS 10 0 1 1 87.661 87.771 3 0.030542 101816 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 19.538 11.826 2916500 0 0 0 0 0 0 0 0 0 2916500 0 0 0 0 0 58998 1554 53035 498483 395445 395445 1 VVLPTFILEK Unmodified 1157.706 0.70599682 4223;4222 Q9BXB4;Q9BXB5 OSBPL11;OSBPL10 Oxysterol-binding protein-related protein 11;Oxysterol-binding protein-related protein 10 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 89.856 89.296 2 0.002198 103803 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 85.676 64.376 121500000 7946200 0 0 1684800 4301500 8028200 5309300 11840000 7604300 13893000 11745000 10857000 5343900 8779700 24167000 58999 4222;4223 53036 498484;498485;498486;498487;498488;498489;498490;498491;498492;498493;498494;498495;498496 395446;395447;395448;395449;395450;395451;395452;395453;395454;395455;395456;395457 395452 12 VVLPTFILER Unmodified 1185.7121 0.71214483 3995 Q96SU4 OSBPL9 Oxysterol-binding protein-related protein 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 90.462 90.57 2 0.0042579 105122 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 74.464 71.458 39781000 0 0 0 0 1579200 2593500 2226500 4548200 2173900 5235500 3819900 4155800 1828200 2788400 8831500 59000 3995 53037 498497;498498;498499;498500;498501;498502;498503;498504;498505;498506;498507 395458;395459;395460;395461;395462;395463;395464;395465;395466;395467;395468 395460 11 VVLPTLASLR Unmodified 1067.6703 0.67028001 2067 Q01970 PLCB3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 83.032 83.181 2 0.0067887 95914 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.04 40.612 12614000 0 0 0 0 0 1435200 0 1603400 1187500 0 0 0 0 0 8388100 59001 2067 53038 498508;498509;498510;498511 395469 395469 1 VVLPYLVPK Unmodified 1026.6478 0.64775366 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.097 81.157 2 0.0052293 93859 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 79.597 73.849 272130000 0 0 0 12223000 17476000 28695000 15759000 15089000 13580000 29572000 24876000 37911000 21574000 21349000 34028000 59002 3641 53039 498512;498513;498514;498515;498516;498517;498518;498519;498520;498521;498522;498523 395470;395471;395472;395473;395474;395475;395476;395477;395478;395479;395480;395481 395479 12 VVLQPQAGSSQGASSGLSVVK Unmodified 1998.0746 0.074568512 4517 Q9HCK8 CHD8 Chromodomain-helicase-DNA-binding protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.65 1.63 1 22 1 2 2 2 2 2 2 2 1 2 2 2 1 64.965 64.766 2;3 1.6357E-15 73342 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 116.96 105.96 267040000 0 19979000 0 18461000 18219000 20812000 21723000 16890000 18282000 24034000 15809000 35398000 21731000 19881000 15824000 59003 4517 53040 498524;498525;498526;498527;498528;498529;498530;498531;498532;498533;498534;498535;498536;498537;498538;498539;498540;498541;498542;498543;498544;498545;498546 395482;395483;395484;395485;395486;395487;395488;395489;395490;395491;395492 395486 10 VVLQQDPQQAR Unmodified 1280.6837 0.68369824 399 O60437 PPL Periplakin yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 28.877 29.075 2 1.9992E-05 31638 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 130.56 112.25 62873000 0 0 0 17621000 5123800 0 5056200 10054000 0 0 0 5754100 7039700 5070000 7154300 59004 399 53041 498547;498548;498549;498550;498551;498552;498553;498554 395493;395494;395495 395495 3 VVLSDAYAHPQQK Unmodified 1454.7518 0.75177781 2552 Q15628 TRADD Tumor necrosis factor receptor type 1-associated DEATH domain protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8 3.46 3 9 1 1 1 1 1 1 1 1 1 1 1 1 39.474 38.219 3 0.00049448 49577 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.676 60.499 121030000 9676200 59246000 5612900 2713400 2041400 7909800 2999300 3916000 2872700 9192500 0 0 0 5305300 9546800 59005 2552 53042 498555;498556;498557;498558;498559;498560;498561;498562;498563;498564;498565;498566 395496;395497;395498;395499;395500 395497 5 VVLSESVQVEK Unmodified 1215.6711 0.67106787 399 O60437 PPL Periplakin yes yes 0 0 0 By MS/MS 2 0 1 1 55.022 49.216 2 0.026953 63779 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 70.363 50.576 34812000 0 34812000 0 0 0 0 0 0 0 0 0 0 0 0 0 59006 399 53043 498567 395501 395501 1 VVLTDPEAAK Unmodified 1041.5706 0.57062555 770 P04062 GBA Glucosylceramidase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 39.445 39.216 2 0.011338 44173 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 54.416 19.609 269080000 0 117330000 0 45688000 8100700 8315300 8029700 12480000 5664500 9329800 8732700 13799000 11655000 7748700 12210000 59007 770 53044 498568;498569;498570;498571;498572;498573;498574;498575;498576;498577;498578;498579;498580 395502;395503;395504;395505;395506;395507;395508;395509 395509 7 VVLTQANK Unmodified 871.51272 0.51271674 614 O94979 SEC31A Protein transport protein Sec31A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18.532 17.932 2 0.012121 22622 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.69 59.799 770150000 27287000 454550000 6317500 14281000 13094000 19706000 19372000 17533000 15885000 29484000 26278000 35298000 24979000 25791000 40298000 59008 614 53045 498581;498582;498583;498584;498585;498586;498587;498588;498589;498590;498591;498592;498593;498594;498595 395510;395511;395512;395513 395511 4 VVLVESSER Unmodified 1016.5502 0.55022446 1619 P50336 PPOX Protoporphyrinogen oxidase yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 32.547 32.796 2 0.0071238 35694 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 73.26 46.13 52933000 0 0 0 0 4710400 5328800 4536800 6314500 0 4964500 5800300 8068500 5687500 3642500 3879300 59009 1619 53046 498596;498597;498598;498599;498600;498601;498602;498603;498604;498605 395514;395515;395516;395517;395518;395519;395520;395521 395519 8 VVLVLAGR Unmodified 825.54362 0.54362294 1847 P61353 RPL27 60S ribosomal protein L27 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.805 59.914 2 0.01035 69557 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 79.939 38.222 343000000 0 0 0 21154000 21371000 23477000 29690000 17017000 23296000 30654000 27774000 49209000 24197000 27688000 47476000 59010 1847 53047 498606;498607;498608;498609;498610;498611;498612;498613;498614;498615;498616;498617 395522;395523;395524;395525;395526;395527;395528;395529;395530;395531;395532;395533;395534;395535 395534 12 VVLVNNILQNAQER Unmodified 1608.8948 0.89475365 639 O95295 SNAPIN SNARE-associated protein Snapin yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 79.204 79.304 2 3.0889E-05 91270 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.156 90.122 48901000 0 0 0 0 3001800 0 2362600 0 0 6797700 7905500 11300000 0 5163300 12370000 59011 639 53048 498618;498619;498620;498621;498622;498623;498624 395536;395537;395538;395539;395540;395541 395537 5 VVLVTGAGAGLGR Unmodified 1168.6928 0.69280637 1667 P51659 HSD17B4 Peroxisomal multifunctional enzyme type 2;(3R)-hydroxyacyl-CoA dehydrogenase;Enoyl-CoA hydratase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 61.635 61.467 2 0.010421 70156 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 43.308 28.639 17067000 0 0 0 4475800 3834400 0 0 4609500 0 0 4147400 0 0 0 0 59012 1667 53049 498625;498626;498627;498628;498629 395542;395543;395544;395545 395543 4 VVLWGSDYSK Unmodified 1152.5815 0.58152458 699 O95834 EML2 Echinoderm microtubule-associated protein-like 2 yes yes 0 0 0 By MS/MS 10 0 1 1 63.622 64.186 2 0.0070493 72583 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.173 66.241 10353000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10353000 59013 699 53050 498630 395546 395546 1 VVMDGVISDHECQELQR Unmodified 2013.9248 0.92480951 2663 Q32P28 LEPRE1 Prolyl 3-hydroxylase 1 yes yes 0 0 0 By MS/MS 10 0 1 1 60.323 60.91 3 0.00015209 68724 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.107 55.358 6906900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6906900 59014 2663 53051 498631 395547 395547 1 VVMEQQLK Unmodified 973.52665 0.52665224 5102 Q9Y2H2 INPP5F Phosphatidylinositide phosphatase SAC2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 31.555 31.745 2 0.0081248 34710 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 87.284 57.099 66059000 0 0 0 4517300 4637100 4760700 4466800 6667500 2659800 0 11331000 8025700 5644300 5772800 7575700 59015 5102 53052 498632;498633;498634;498635;498636;498637;498638;498639;498640;498641;498642 395548;395549;395550;395551 395549 4 VVNAAIATASSASGEPEEPVVPSTTR Unmodified 2539.2766 0.27657538 241 O15020 SPTBN2 Spectrin beta chain, non-erythrocytic 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 70.42 70.311 3 0.0043559 81395 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 23.913 16.636 12502000 0 0 0 3309900 0 0 0 4564300 0 0 0 0 4628100 0 0 59016 241 53053 498643;498644;498645 395552 395552 1 VVNANQNASPNVPGK Unmodified 1507.7743 0.77430417 3241 Q8IWI9 MGA MAX gene-associated protein yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching 10 0 8 1 1 1 1 1 1 1 1 27.098 27.279 2 0.0027923 29317 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 62.466 52.513 29751000 0 0 0 2848600 0 5000300 2135900 4058600 0 2960400 0 0 3412400 4385900 4948900 59017 3241 53054 498646;498647;498648;498649;498650;498651;498652;498653 395553;395554;395555 395554 3 VVNAVLTQIDQIK Unmodified 1439.8348 0.83477916 2557 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 80.103 80.162 2;3 0.00044602 92613 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 72.496 65.087 827020000 0 0 0 14884000 34009000 82240000 57936000 63962000 39567000 113000000 82287000 87525000 42518000 62916000 146180000 59018 2557 53055 498654;498655;498656;498657;498658;498659;498660;498661;498662;498663;498664;498665;498666;498667;498668;498669;498670;498671;498672;498673;498674;498675;498676;498677 395556;395557;395558;395559;395560;395561;395562;395563;395564;395565;395566 395556 9 VVNGAAASQPPSK Unmodified 1224.6463 0.64625011 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.88 3.69 2 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 21.1 21.08 2 5.1458E-13 14307 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 136.02 118.78 949400000 41668000 20063000 0 48812000 41273000 48446000 55967000 48494000 53618000 86639000 93894000 111210000 70613000 91444000 137260000 59019 516 53056 498678;498679;498680;498681;498682;498683;498684;498685;498686;498687;498688;498689;498690;498691;498692;498693 395567;395568;395569;395570;395571;395572;395573;395574;395575;395576;395577;395578;395579;395580;395581;395582 395567 15 VVNGAAASQPPSKR Unmodified 1380.7474 0.74736113 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 11.211 11.366 3 0.032474 9930 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 24.558 15.829 3904900 0 0 0 0 0 0 1687500 0 0 0 0 2217400 0 0 0 59020 516 53057 498694;498695 395583 395583 1 VVNGPEILNK Unmodified 1081.6132 0.61315906 1504 P46459 NSF Vesicle-fusing ATPase yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 51.689 46.354 2 0.0032163 60269 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.948 68.774 38709000 0 38709000 0 0 0 0 0 0 0 0 0 0 0 0 0 59021 1504 53058 498696;498697 395584;395585 395584 2 VVNGQTATIAK Unmodified 1100.619 0.61897272 3755 Q96BD5 PHF21A PHD finger protein 21A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.141 21.344 2 0.00053837 21661 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 81.972 24.412 96376000 0 0 0 4561200 5925900 7507100 6389400 7678500 4732700 7297800 10717000 13887000 9626500 9753200 8300600 59022 3755 53059 498698;498699;498700;498701;498702;498703;498704;498705;498706;498707;498708;498709 395586;395587;395588;395589;395590;395591;395592;395593;395594;395595;395596 395590 11 VVNIDTNSLR Unmodified 1129.6091 0.60913632 5292 Q9Y6Q9 NCOA3 Nuclear receptor coactivator 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 49.891 49.991 2 0.002754 57008 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 80.438 40.17 98071000 0 0 0 9768400 8891000 0 9552100 0 7577900 11566000 11794000 0 8548500 10453000 19919000 59023 5292 53060 498710;498711;498712;498713;498714;498715;498716;498717;498718;498719 395597;395598;395599;395600;395601;395602;395603;395604;395605;395606;395607 395607 11 VVNITSPGHDASSR Unmodified 1438.7165 0.71645494 2567 Q15723 ELF2 ETS-related transcription factor Elf-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 1 1 1 1 1 1 2 1 2 2 27.408 27.679 2;3 0.001013 28576 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 55.335 45.547 254990000 0 0 0 13931000 13432000 15175000 16117000 16676000 11119000 18164000 22318000 57313000 18892000 21569000 30284000 59024 2567 53061 498720;498721;498722;498723;498724;498725;498726;498727;498728;498729;498730;498731;498732;498733;498734 395608;395609;395610;395611;395612;395613;395614;395615;395616;395617;395618;395619;395620 395616 13 VVNIVPVIAK Unmodified 1050.6801 0.68011642 4898 Q9UHD8 SEPT9 Septin-9 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 76.268 75.701 2 0.0037884 87087 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 75.213 63.444 315960000 15487000 0 0 12879000 18278000 23416000 21663000 25734000 15493000 34072000 38923000 31539000 26206000 17532000 34735000 59025 4898 53062 498735;498736;498737;498738;498739;498740;498741;498742;498743;498744;498745;498746;498747 395621;395622;395623;395624;395625;395626;395627;395628;395629;395630 395625 8 VVNLGVLAQK Unmodified 1039.639 0.63897988 3467 Q8NI36 WDR36 WD repeat-containing protein 36 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 66.909 66.362 2 0.0019959 75041 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 98.523 70.689 126170000 8475000 0 0 4421700 6282900 8448400 10003000 9720900 5860200 10412000 12212000 12430000 11496000 11705000 14704000 59026 3467 53063 498748;498749;498750;498751;498752;498753;498754;498755;498756;498757;498758;498759;498760 395631;395632;395633;395634;395635;395636;395637;395638;395639;395640;395641;395642;395643 395638 12 VVNLHPLK Unmodified 918.56509 0.56508666 2189 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.713 35.894 2 0.012535 39524 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 74.415 48.521 148200000 0 0 0 8025600 8735400 10771000 8813800 6814000 7926500 13981000 15425000 17370000 14709000 11746000 23885000 59027 2189 53064 498761;498762;498763;498764;498765;498766;498767;498768;498769;498770;498771;498772 395644;395645;395646;395647;395648;395649;395650 395645 7 VVNLLQER Unmodified 969.56073 0.56072956 665 O95486 SEC24A Protein transport protein Sec24A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 53.367 53.482 2 0.017697 60742 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 65.246 36.328 21294000 0 0 0 0 0 11103000 0 0 0 10191000 0 0 0 0 0 59028 665 53065 498773;498774;498775;498776;498777 395651;395652;395653;395654;395655 395651 5 VVNLQYSEVQDR Unmodified 1448.726 0.72595699 1904 P62699 YPEL5 Protein yippee-like 5 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 51.743 51.867 2 0.00015103 57585 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.014 64.021 23807000 0 0 0 0 4563500 0 0 0 0 0 0 0 0 4875600 14368000 59029 1904 53066 498778;498779;498780;498781 395656;395657;395658 395656 3 VVNMSSSGGR Unmodified 992.47093 0.47092828 3431 Q8NEX9 SDR9C7 Short-chain dehydrogenase/reductase family 9C member 7 yes yes 0 0 0 By MS/MS 10 0 1 1 12.297 12.16 2 0.030285 11174 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 43.083 34.261 1645300 0 0 0 1645300 0 0 0 0 0 0 0 0 0 0 0 59030 3431 53067 498782 395659 395659 1 VVNPLFEK Unmodified 944.53312 0.53311783 1900 P62424 RPL7A 60S ribosomal protein L7a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 58.668 58.085 2 0.004651 66093 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 109.86 93.709 1493400000 0 401280000 15080000 0 47841000 68478000 52984000 62821000 48414000 114340000 119310000 131110000 158230000 116680000 156810000 59031 1900 53068 498783;498784;498785;498786;498787;498788;498789;498790;498791;498792;498793;498794;498795 395660;395661;395662;395663;395664;395665;395666;395667;395668;395669;395670;395671;395672;395673;395674 395670 15 VVNPYYLR Unmodified 1022.5549 0.5549159 2238 Q13131 PRKAA1 5'-AMP-activated protein kinase catalytic subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 53.963 53.868 2 0.0082464 61001 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 86.866 58.759 31047000 0 0 0 0 9707000 0 14203000 7136800 0 0 0 0 0 0 0 59032 2238 53069 498796;498797;498798;498799;498800 395675;395676;395677;395678;395679 395676 5 VVNQYQELVQNEAK Unmodified 1660.842 0.84204938 3428 Q8NEM7 SUPT20H Transcription factor SPT20 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 60.423 60.677 2 0.00011641 69306 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 83.045 68.887 14020000 0 0 0 0 0 4593500 0 0 2914100 0 0 0 0 0 6512800 59033 3428 53070 498801;498802;498803 395680;395681;395682;395683 395680 4 VVNSYPLAHK Unmodified 1126.6135 0.61349341 4902 Q9UHI6 DDX20 Probable ATP-dependent RNA helicase DDX20 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 6 4 2 2 1 1 1 1 31.424 29.022 2 0.011214 40960 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.248 53.545 53092000 29857000 16571000 0 0 0 0 0 0 0 0 0 2555800 0 0 4108200 59034 4902 53071 498804;498805;498806;498807 395684;395685;395686 395686 3 VVNTDHGSPEQLQIPVTDSGR Unmodified 2248.1084 0.10838784 2890 Q6IQ49 SDE2 Protein SDE2 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.825 61.925 3 2.7494E-48 70532 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 117.55 99.951 166340000 0 0 0 9113100 10624000 11870000 11290000 9944800 6987900 14881000 21352000 16200000 15804000 11448000 26822000 59035 2890 53072 498808;498809;498810;498811;498812;498813;498814;498815;498816;498817;498818;498819 395687;395688;395689;395690;395691;395692;395693;395694;395695;395696;395697;395698;395699;395700;395701;395702;395703 395691 17 VVNTYGPQTRPEGIPGSGHK Unmodified 2093.0654 0.065400809 4618 Q9NS73 MBIP MAP3K12-binding inhibitory protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 40.794 41.054 4 0.0004576 45130 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 36.805 32.889 71891000 0 0 0 0 3872000 10299000 0 0 5167000 9873000 9606000 13108000 0 4298500 15667000 59036 4618 53073 498820;498821;498822;498823;498824;498825;498826;498827 395704;395705;395706 395706 3 VVNVANVGAVPSGQDNIHR Unmodified 1945.013 0.012971308 128 O00203 AP3B1 AP-3 complex subunit beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 55.587 55.441 3 4.7472E-05 62671 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 61.648 51.272 203220000 0 0 0 26727000 30566000 0 41801000 47625000 0 0 0 0 0 56496000 0 59037 128 53074 498828;498829;498830;498831;498832 395707;395708;395709;395710;395711 395707 5 VVNVANVGAVPSGQDNIHRFAAK Unmodified 2362.2506 0.25057582 128 O00203 AP3B1 AP-3 complex subunit beta-1 yes yes 0 0 1 By MS/MS 2 0 1 1 73.091 64.895 4 0.0077806 86071 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 31.282 27.176 14057000 14057000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59038 128 53075 498833 395712 395712 1 VVNVELPIEANLVWQLGK Unmodified 2020.1357 0.13571221 3633 Q92598 HSPH1 Heat shock protein 105 kDa yes yes 0 0 0 By MS/MS 2 0 1 1 100.38 95.668 2 8.2448E-05 118283 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.357 65.879 11676000 0 11676000 0 0 0 0 0 0 0 0 0 0 0 0 0 59039 3633 53076 498834 395713 395713 1 VVNVSSIMSVR Oxidation (M) 1205.6438 0.64380726 1033 P16152 CBR1 Carbonyl reductase [NADPH] 1 yes yes 0 1 0 By MS/MS By matching By matching By matching By MS/MS 10 0 5 1 1 1 1 1 52.268 52.72 2 0.0016579 58576 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.334 54.067 69245000 0 0 0 0 0 0 0 0 0 0 13237000 13171000 3914200 9475900 29446000 59040 1033 53077 498835;498836;498837;498838;498839 395714;395715 395714 1460 2 VVPALPESGQSEPGPPEVEGGTK Unmodified 2260.1223 0.12230657 252 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 68.794 68.732 3 0.029672 79296 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 19.722 12.276 19374000 0 0 0 4044400 4112400 0 0 0 0 0 0 4997300 0 0 6219500 59041 252 53078 498840;498841;498842;498843 395716 395716 1 VVPCLVTPVTGR Unmodified 1296.7224 0.72239194 487 O75369 FLNB Filamin-B yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 70.298 70.416 2 0.005898 81158 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 52.79 38.296 127670000 0 0 0 7519500 0 9981600 7197000 0 7261900 11809000 14448000 15134000 9219700 12885000 32212000 59042 487 53079 498844;498845;498846;498847;498848;498849;498850;498851;498852;498853 395717;395718;395719;395720;395721;395722;395723;395724;395725;395726 395717 10 VVPCLVTPVTGRENSTAK Unmodified 1927.0197 0.01969617 487 O75369 FLNB Filamin-B yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 67.564 61.544 3 3.3007E-05 82542 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.493 40.328 63838000 57651000 0 6187100 0 0 0 0 0 0 0 0 0 0 0 0 59043 487 53080 498854;498855 395727;395728;395729 395728 3 VVPDPNVIK Unmodified 979.57023 0.57023162 4655;5016 Q9NUU7;Q9UMR2 DDX19A;DDX19B ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX19B no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.838 48.001 2 0.012661 53035 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 60.972 48.765 946600000 0 0 0 52785000 46720000 95039000 69072000 60089000 48077000 104240000 92033000 95396000 84780000 78034000 120340000 59044 4655;5016 53081 498856;498857;498858;498859;498860;498861;498862;498863;498864;498865;498866;498867 395730 395730 1 VVPEMTEILK Unmodified 1157.6366 0.63659662 988 P13804 ETFA Electron transfer flavoprotein subunit alpha, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 81.908 77.203 2 0.043977 95916 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 53.493 28.571 446160000 0 446160000 0 0 0 0 0 0 0 0 0 0 0 0 0 59045 988 53082 498868 395731 395731 1 VVPGFIVQGGDPTGTGSGGESIYGAPFK Unmodified 2693.3337 0.33369632 2982 Q6UX04 CWC27 Peptidyl-prolyl cis-trans isomerase CWC27 homolog yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 87.723 87.861 3 0.012615 101670 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 18.356 15.423 5647000 0 0 0 0 0 0 0 0 0 0 0 1294800 0 0 4352200 59046 2982 53083 498869;498870 395732 395732 1 VVPGQFDDADSSDSENRDLK Unmodified 2192.9822 0.98218427 4115 Q9BRS2 RIOK1 Serine/threonine-protein kinase RIO1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 2 1 1 45.54 45.752 3 4.7618E-05 51445 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 52.185 45.749 97954000 0 0 0 6049600 0 10211000 8311000 7860300 8445900 9542000 0 25160000 10022000 12352000 0 59047 4115 53084 498871;498872;498873;498874;498875;498876;498877;498878;498879;498880 395733;395734;395735;395736;395737;395738;395739;395740 395739 5 VVPIASLTPYQSK Unmodified 1401.7868 0.78676633 1221 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75.257 74.271 2 1.6996E-06 92887 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.84 114.85 1150600000 115360000 678020000 4430100 13165000 16780000 31727000 24860000 23739000 15871000 43890000 39056000 37569000 24874000 27302000 53933000 59048 1221 53085 498881;498882;498883;498884;498885;498886;498887;498888;498889;498890;498891;498892;498893;498894;498895 395741;395742;395743;395744;395745;395746;395747;395748;395749;395750;395751;395752;395753;395754 395744 13 VVPLADIITPNQFEAELLSGRK Unmodified 2409.3268 0.32676045 181 O00764 PDXK Pyridoxal kinase yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 99.062 95.051 3 0.0041566 117740 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 31.621 28.739 15767000 0 15767000 0 0 0 0 0 0 0 0 0 0 0 0 0 59049 181 53086 498896;498897 395755;395756 395755 2 VVPLDFSMSSLAK Oxidation (M) 1408.7272 0.72720254 1739 P54278 PMS2 Mismatch repair endonuclease PMS2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 77.392 77.396 2 0.0012239 89219 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 61.344 44.673 85481000 0 0 0 9778000 0 0 0 16782000 0 24753000 0 0 18210000 15959000 0 59050 1739 53087 498898;498899;498900;498901;498902 395757;395758;395759;395760 395758 2822 4 VVPLDFSMSSLAK Unmodified 1392.7323 0.73228792 1739 P54278 PMS2 Mismatch repair endonuclease PMS2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 86.496 86.524 2 0.0059567 100704 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 57.836 47.126 96814000 0 0 0 3302800 6053700 8316100 0 0 0 11878000 12254000 11720000 8786600 9545800 24957000 59051 1739 53087 498903;498904;498905;498906;498907;498908;498909;498910;498911 395761;395762;395763;395764;395765;395766 395764 4 VVPNPFSESGGDMK Oxidation (M) 1478.6711 0.67114423 1613 P49916 LIG3 DNA ligase 3 yes yes 0 1 0 By MS/MS 2 0 1 1 63.08 57.187 2 0.0020103 73221 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.153 58.29 47541000 0 47541000 0 0 0 0 0 0 0 0 0 0 0 0 0 59052 1613 53088 498912 395767 395767 2593 1 VVPNPFSESGGDMK Unmodified 1462.6762 0.67622961 1613 P49916 LIG3 DNA ligase 3 yes yes 0 0 0 By MS/MS 2 0 1 1 71.968 66.241 2 0.0013954 83981 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.397 74.638 54878000 0 54878000 0 0 0 0 0 0 0 0 0 0 0 0 0 59053 1613 53088 498913 395768 395768 1 VVPPLDEDGR Unmodified 1095.556 0.55603811 1180 P24941 CDK2 Cyclin-dependent kinase 2 yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 41.82 42.061 2 0.019804 45750 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 47.603 28.827 214610000 0 0 0 0 9080600 25196000 15570000 12677000 10687000 29230000 26046000 22788000 14410000 18601000 30327000 59054 1180 53089 498914;498915;498916;498917;498918;498919;498920;498921;498922;498923;498924 395769;395770;395771;395772 395771 4 VVPQQITHTSPR Unmodified 1361.7415 0.74154747 4325 Q9H0E3 SAP130 Histone deacetylase complex subunit SAP130 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.69 29.882 3 1.7193E-05 32361 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 83.137 73.358 413680000 0 0 0 27191000 24113000 21684000 26832000 28519000 25492000 38100000 23768000 55100000 37070000 37001000 68813000 59055 4325 53090 498925;498926;498927;498928;498929;498930;498931;498932;498933;498934;498935;498936 395773;395774;395775;395776;395777;395778;395779;395780;395781;395782;395783;395784 395776 10 VVPQTVMATVPVK Unmodified 1367.7847 0.78465784 2935 Q6P4R8 NFRKB Nuclear factor related to kappa-B-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 71.919 71.613 2 0.00076428 89662 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.058 64.659 83391000 0 28676000 0 2982900 3460200 3577700 3921500 5720000 2660100 5634900 4243500 6443800 2784500 5990200 7296600 59056 2935 53091 498937;498938;498939;498940;498941;498942;498943;498944;498945;498946;498947;498948;498949 395785;395786;395787 395785 3 VVPSYMQAVNR Oxidation (M) 1278.6391 0.63905624 3522 Q8TEX9 IPO4 Importin-4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 39.156 39.349 2 0.0011057 42508 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 71.223 53.787 170480000 0 0 0 14250000 0 16440000 14040000 0 7665500 20186000 24523000 29739000 26765000 16875000 0 59057 3522 53092 498950;498951;498952;498953;498954;498955;498956;498957;498958 395788;395789;395790;395791 395791 5027 4 VVPSYMQAVNR Unmodified 1262.6441 0.64414162 3522 Q8TEX9 IPO4 Importin-4 yes yes 0 0 0 By MS/MS 10 0 1 1 52.633 53.31 2 0.01965 59475 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.419 51.571 17007000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17007000 59058 3522 53092 498959 395792 395792 0 VVPTFEAVAPQSR Unmodified 1399.746 0.74596415 607 O94927 HAUS5 HAUS augmin-like complex subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 66.144 66.221 2 0.014214 75843 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 44.299 31.723 58479000 0 0 0 3369500 3922000 4003600 4507800 6604100 0 5598800 7583500 7527400 3825700 5211400 6325100 59059 607 53093 498960;498961;498962;498963;498964;498965;498966;498967;498968;498969;498970 395793;395794;395795;395796;395797 395796 5 VVPTLSTTDMK Oxidation (M) 1206.6166 0.61658946 2935 Q6P4R8 NFRKB Nuclear factor related to kappa-B-binding protein yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 39.629 39.898 2 0.0046523 44371 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 54.982 43.492 17228000 0 0 0 0 2035000 0 0 0 0 0 6680000 5260200 3253000 0 0 59060 2935 53094 498971;498972;498973;498974 395798 395798 4572 1 VVPTTDHIDTEK Unmodified 1353.6776 0.67760981 529 O75663 TIPRL TIP41-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.28 3.23 3 1 14 1 2 1 1 2 1 1 1 2 1 1 2 2 27.975 27.172 2;3 1.843E-13 34955 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.01 106.15 1060200000 21474000 786450000 17032000 0 13459000 54070000 3628000 3464700 2112500 42911000 8467000 7887000 0 28117000 71174000 59061 529 53095 498975;498976;498977;498978;498979;498980;498981;498982;498983;498984;498985;498986;498987;498988;498989;498990;498991;498992 395799;395800;395801;395802;395803;395804;395805;395806;395807;395808;395809 395803 9 VVPTVYMK Unmodified 935.51502 0.51502492 5089 Q9Y282 ERGIC3 Endoplasmic reticulum-Golgi intermediate compartment protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 55.444 49.474 2 0.032179 64340 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.415 57.488 67562000 20457000 46014000 1091600 0 0 0 0 0 0 0 0 0 0 0 0 59062 5089 53096 498993;498994;498995 395810 395810 1 VVPVRLDLTEK Unmodified 1267.75 0.7499869 3667 Q92820 GGH Gamma-glutamyl hydrolase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 2 1 1 1 2 1 2 2 2 2 2 2 63.098 63.225 2;3 0.00022668 73125 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 92.866 77.494 366390000 0 0 0 58715000 17935000 17717000 24695000 42805000 12644000 32321000 31806000 36601000 32847000 24022000 34288000 59063 3667 53097 498996;498997;498998;498999;499000;499001;499002;499003;499004;499005;499006;499007;499008;499009;499010;499011;499012;499013;499014;499015 395811;395812;395813;395814;395815;395816;395817;395818;395819;395820;395821;395822 395820 9 VVQAASATLPTVPQK Unmodified 1508.8562 0.85624288 2070 Q02086 SP2 Transcription factor Sp2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 57.903 58.19 2 0.0015239 66101 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 72.152 66.18 53912000 0 0 0 0 0 7830300 0 0 4751400 5785800 7026200 8952800 4613400 4830500 10122000 59064 2070 53098 499016;499017;499018;499019;499020;499021;499022;499023 395823;395824;395825;395826;395827;395828;395829 395826 7 VVQALDPFNSR Unmodified 1244.6513 0.65133548 3566 Q8WVV4 POF1B Protein POF1B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.987 69.067 2 0.00033878 79215 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 96.665 84.951 177960000 0 0 0 79715000 5460800 6443000 7358100 36323000 4549900 5523300 9113300 8838200 6670800 3830700 4129800 59065 3566 53099 499024;499025;499026;499027;499028;499029;499030;499031;499032;499033;499034;499035 395830;395831;395832;395833;395834;395835;395836;395837;395838;395839;395840 395834 10 VVQDAALTYQQFK Unmodified 1509.7827 0.78274359 3666 Q92817 EVPL Envoplakin yes yes 0 0 0 By MS/MS By matching By MS/MS 7.33 3.77 1 2 1 1 1 65.675 63.538 2 4.1293E-07 80388 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.49 122.03 46524000 0 35986000 0 6342600 0 0 0 4195200 0 0 0 0 0 0 0 59066 3666 53100 499036;499037;499038 395841;395842 395841 2 VVQDLSGEHMGAVWTMK Oxidation (M) 1902.8968 0.89680384 2734 Q5JSH3 WDR44 WD repeat-containing protein 44 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 4 1 1 2 70.222 64.92 3 0.00013579 81139 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 68.173 59.682 76908000 18079000 32104000 26725000 0 0 0 0 0 0 0 0 0 0 0 0 59067 2734 53101 499039;499040;499041;499042 395843;395844;395845;395846;395847 395847 4378;4379 5 VVQDLSGEHMGAVWTMK Unmodified 1886.9019 0.90188922 2734 Q5JSH3 WDR44 WD repeat-containing protein 44 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 79.041 73.63 3 1.9698E-05 95186 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.385 84.354 47279000 38434000 0 8845900 0 0 0 0 0 0 0 0 0 0 0 0 59068 2734 53101 499043;499044 395848;395849 395848 2 VVQDTYQIMK Unmodified 1223.622 0.62200919 230 O14964 HGS Hepatocyte growth factor-regulated tyrosine kinase substrate yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 48.937 49.321 2 0.0046374 56015 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 103.56 62.534 63955000 0 0 0 0 0 0 10165000 0 0 0 17017000 0 12585000 0 24189000 59069 230 53102 499045;499046;499047;499048;499049;499050 395850;395851;395852;395853 395850 4 VVQDTYQIMK Oxidation (M) 1239.6169 0.61692381 230 O14964 HGS Hepatocyte growth factor-regulated tyrosine kinase substrate yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 35.634 35.062 2 0.0020956 43853 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.14 92.91 190500000 0 154260000 0 0 0 0 0 0 0 0 0 13156000 6463600 6305000 10313000 59070 230 53102 499051;499052;499053;499054;499055;499056;499057;499058 395854;395855;395856;395857;395858;395859;395860;395861 395856 305 8 VVQGHRQLDSYK Unmodified 1428.7474 0.74736113 1137 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 21.283 17.452 3 0.0043281 24915 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.395 39.278 747640000 703600000 38948000 5089900 0 0 0 0 0 0 0 0 0 0 0 0 59071 1137 53103 499059;499060;499061 395862;395863 395863 2 VVQGLFDNFLR Unmodified 1306.7034 0.70337105 3559 Q8WVB6 CHTF18 Chromosome transmission fidelity protein 18 homolog yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 88.955 89.09 2 0.0024673 102883 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 67.563 54.526 24142000 0 0 0 0 0 2183100 0 2274800 1822800 3196400 2096700 2145100 1546000 1335600 7541400 59072 3559 53104 499062;499063;499064;499065;499066;499067;499068;499069;499070 395864;395865;395866;395867;395868;395869;395870 395867 7 VVQGSPEVPGITVR Unmodified 1436.7987 0.798728 3315 Q8N201 INTS1 Integrator complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.818 65.903 2 0.0024069 75602 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 64.439 53.274 70600000 0 0 0 2813900 4249600 6262500 3612900 5613600 3167200 6075100 5477000 9221700 6679300 6746300 10681000 59073 3315 53105 499071;499072;499073;499074;499075;499076;499077;499078;499079;499080;499081;499082 395871;395872;395873;395874;395875 395871 3 VVQHLGPATDFYK Unmodified 1473.7616 0.76161421 666 O95487 SEC24B Protein transport protein Sec24B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 64.052 58.058 3 0.00096079 75229 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.927 59.574 155450000 93000000 35909000 26542000 0 0 0 0 0 0 0 0 0 0 0 0 59074 666 53106 499083;499084;499085 395876;395877;395878 395876 3 VVQLHEYSEELEK Unmodified 1601.7937 0.7937022 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.54 3 3 2 21 1 3 1 1 2 1 2 2 1 2 2 2 2 2 2 53.593 52.683 2;3 1.2209E-12 57871 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 129.82 115.15 532620000 40446000 68851000 144340000 7897500 13602000 19753000 17051000 19735000 9459300 26666000 31987000 35795000 22812000 24616000 49607000 59075 2431 53107 499086;499087;499088;499089;499090;499091;499092;499093;499094;499095;499096;499097;499098;499099;499100;499101;499102;499103;499104;499105;499106;499107;499108;499109;499110;499111 395879;395880;395881;395882;395883;395884;395885;395886;395887;395888;395889;395890;395891;395892;395893;395894;395895 395884 11 VVQMFYVAEPK Unmodified 1309.674 0.67404476 3713 Q969F9 HPS3 Hermansky-Pudlak syndrome 3 protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 75.275 75.315 2 0.00047061 87222 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 84.213 65.467 38494000 0 0 0 2668600 2646700 0 3999200 0 0 4567500 4801800 6734800 3346300 3446000 6283300 59076 3713 53108 499112;499113;499114;499115;499116;499117;499118;499119;499120;499121 395896;395897;395898;395899;395900;395901;395902;395903;395904 395901 9 VVQMLGSLGGQINK Oxidation (M) 1458.7864 0.78644876 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 2 2 2 2 2 1 1 1 1 1 1 2 57.467 57.533 2 1.739E-29 66243 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 145.99 136.3 253360000 0 0 0 25102000 21136000 21747000 21937000 21255000 6783400 10256000 23355000 29849000 15895000 14263000 41781000 59077 1986 53109 499122;499123;499124;499125;499126;499127;499128;499129;499130;499131;499132;499133;499134;499135;499136;499137;499138;499139 395905;395906;395907;395908;395909;395910;395911;395912;395913;395914;395915;395916;395917;395918;395919;395920;395921 395921 3241 13 VVQMLGSLGGQINK Unmodified 1442.7915 0.79153413 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 73.914 74.03 2 3.3591E-05 85305 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 101.95 73.555 111390000 0 0 0 0 4767900 10140000 5495300 7378800 5904700 8675900 12883000 13319000 7328000 10844000 24658000 59078 1986 53109 499140;499141;499142;499143;499144;499145;499146;499147;499148;499149;499150 395922;395923;395924;395925;395926;395927;395928;395929;395930;395931;395932;395933 395923 12 VVQNDAYTAPALPSSIR Unmodified 1800.937 0.9370124 4243 Q9BY77 POLDIP3 Polymerase delta-interacting protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.326 71.398 2 1.532E-13 81743 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 93.348 86.912 301130000 0 0 0 14265000 19338000 19227000 27237000 21245000 18688000 29126000 32394000 33531000 21314000 27015000 37753000 59079 4243 53110 499151;499152;499153;499154;499155;499156;499157;499158;499159;499160;499161;499162 395934;395935;395936;395937;395938;395939;395940;395941;395942;395943;395944;395945 395937 12 VVQPQEEIATK Unmodified 1240.6663 0.66631685 3871 Q96HW7 INTS4 Integrator complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 36.131 36.2 2 1.3352E-05 38778 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 136.57 125.86 118000000 0 0 0 9957700 8432800 12751000 9543100 10373000 10761000 12700000 13397000 0 16134000 13954000 0 59080 3871 53111 499163;499164;499165;499166;499167;499168;499169;499170;499171;499172 395946;395947;395948;395949;395950;395951;395952;395953;395954;395955 395952 10 VVQSFSTSKPPAILPVAAPTPVVPSSAPAAVAK Unmodified 3183.7907 0.79073608 5000 Q9ULM3 YEATS2 YEATS domain-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 86.084 86.213 3 0.00011749 100115 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 24.829 22.547 30700000 0 0 0 0 0 4285700 0 2607700 0 8679100 0 9410500 0 0 5716900 59081 5000 53112 499173;499174;499175;499176;499177 395956;395957;395958;395959 395959 4 VVQSLEQTAR Unmodified 1129.6091 0.60913632 2553 Q15631 TSN Translin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 2 1 27.62 27.799 2 0.0044926 28686 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.643 29.397 89221000 0 0 0 7507100 0 11228000 7240200 7412500 0 8206000 17064000 0 0 0 30563000 59082 2553 53113 499178;499179;499180;499181;499182;499183;499184;499185;499186;499187;499188 395960;395961;395962;395963;395964;395965;395966;395967;395968;395969;395970;395971;395972 395965 12 VVQSLEQTAREILTLLQGVHQGAGFQDIPK Unmodified 3274.7674 0.76737488 2553 Q15631 TSN Translin yes yes 0 0 1 By MS/MS 3 0 1 1 102.61 99.048 4 0.01887 119032 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 21.771 16.559 2128700 0 2128700 0 0 0 0 0 0 0 0 0 0 0 0 0 59083 2553 53114 499189 395973 395973 1 VVQSMTQLVR Oxidation (M) 1175.6332 0.63324258 4287 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 30.759 31.028 2 0.003952 34142 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.692 51.321 21962000 0 0 0 0 0 6620000 2924500 0 3091300 0 3631900 0 0 0 5694300 59084 4287 53115 499190;499191;499192;499193;499194;499195;499196 395974;395975;395976;395977;395978;395979 395974 5754 6 VVQTDETAR Unmodified 1017.5091 0.50908792 3 A0AVT1 UBA6 Ubiquitin-like modifier-activating enzyme 6 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 8.5773 8.6793 2 0.025695 7466 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 50.127 34.465 7151200 0 0 0 729850 0 1046000 2293300 0 0 681000 0 0 0 814350 1586600 59085 3 53116 499197;499198;499199;499200;499201;499202 395980 395980 1 VVQTDETARKPDHVPISSEDER Unmodified 2507.2252 0.22520851 3 A0AVT1 UBA6 Ubiquitin-like modifier-activating enzyme 6 yes yes 0 0 2 By MS/MS By MS/MS 10 0 2 1 1 33.225 33.738 4 0.0016495 35769 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 34.346 30.395 12887000 0 0 0 0 0 0 0 0 0 0 0 0 0 4922000 7965400 59086 3 53117 499203;499204 395981 395981 1 VVQVFSEYFK Unmodified 1244.6441 0.64412484 4232 Q9BXS5 AP1M1 AP-1 complex subunit mu-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 86.343 81.216 2 0.0014533 103338 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.87 100.61 140720000 81708000 45827000 13186000 0 0 0 0 0 0 0 0 0 0 0 0 59087 4232 53118 499205;499206;499207 395982;395983;395984 395983 3 VVQVSAGDSHTAALTDDGR Unmodified 1897.913 0.91298249 1078 P18754 RCC1 Regulator of chromosome condensation yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 41.87 41.99 3 4.3007E-39 45780 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 117.26 112.73 70542000 0 0 0 2107200 3088400 5215200 3792300 0 4691900 8258500 11987000 0 4336900 7351600 19713000 59088 1078 53119 499208;499209;499210;499211;499212;499213;499214;499215;499216;499217 395985;395986;395987;395988;395989 395987 5 VVQVYADTQEINLK Unmodified 1618.8566 0.85663681 5052 Q9UPN9 TRIM33 E3 ubiquitin-protein ligase TRIM33 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 71.062 70.507 2 4.7847E-14 87695 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 139.86 126.05 246230000 0 155260000 0 2556600 5126800 6887400 5964300 5258600 4895700 13003000 9985400 12389000 6628300 6939000 11336000 59089 5052 53120 499218;499219;499220;499221;499222;499223;499224;499225;499226;499227;499228;499229;499230;499231 395990;395991;395992;395993;395994;395995;395996;395997;395998;395999;396000;396001;396002;396003 395993 14 VVREAVK Unmodified 799.49159 0.49158736 1297 P31153 MAT2A S-adenosylmethionine synthase isoform type-2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 7.532 4.5386 2 0.040238 6722 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.77 46.407 6422900000 5276700000 819930000 326280000 0 0 0 0 0 0 0 0 0 0 0 0 59090 1297 53121 499232;499233;499234 396004;396005 396004 0 VVRPQGAEPVK Unmodified 1178.6772 0.6771563 2164 Q08AD1 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.545 18.739 3 0.0044707 17634 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 77.062 57.301 210700000 0 0 0 16036000 17613000 20610000 17349000 12221000 12964000 21190000 16246000 22113000 18804000 9991800 25564000 59091 2164 53122 499235;499236;499237;499238;499239;499240;499241;499242;499243;499244;499245;499246 396006;396007;396008;396009;396010;396011;396012;396013;396014;396015;396016;396017 396013 3 VVRQASVHDSGEEGEA Unmodified 1668.7703 0.770341 3512 Q8TE77 SSH3 Protein phosphatase Slingshot homolog 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 17.468 14.068 3 0.0074067 18724 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 42.813 31.543 16204000 5827700 4808200 5568200 0 0 0 0 0 0 0 0 0 0 0 0 59092 3512 53123 499247;499248;499249 396018 396018 1 VVRSVHYCPATK Unmodified 1415.7344 0.73435361 1183 P25205 MCM3 DNA replication licensing factor MCM3 yes yes 0 0 1 By MS/MS 2 0 1 1 26.814 21.425 3 0.025482 30302 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.32 40.511 22356000 22356000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59093 1183 53124 499250 396019 396019 1 VVSAAVQAQHSATK Unmodified 1395.747 0.74702678 4370 Q9H2M9 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.04 3.41 6 1 21 2 3 2 2 2 2 3 2 2 2 1 1 2 1 1 18.443 17.575 2;3 1.0082E-43 23334 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 212.2 196.31 954950000 399910000 325230000 67350000 13418000 12912000 19627000 28910000 16061000 9540700 20569000 3864300 7343100 18744000 5506300 5962900 59094 4370 53125 499251;499252;499253;499254;499255;499256;499257;499258;499259;499260;499261;499262;499263;499264;499265;499266;499267;499268;499269;499270;499271;499272;499273;499274;499275;499276;499277;499278 396020;396021;396022;396023;396024;396025;396026;396027;396028;396029;396030;396031;396032;396033;396034;396035;396036;396037;396038;396039;396040;396041;396042;396043;396044;396045;396046;396047;396048;396049;396050 396027 26 VVSAFLK Unmodified 762.46398 0.46397563 1495 P46060 RANGAP1 Ran GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.566 48.725 2 0.027575 55751 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 77.374 17.765 548070000 0 0 0 34943000 29704000 52949000 42387000 41982000 33654000 65545000 57405000 6833400 58486000 53935000 70243000 59095 1495 53126 499279;499280;499281;499282;499283;499284;499285;499286;499287;499288;499289;499290 396051;396052;396053;396054 396054 4 VVSAGTYPVLIQGETSVGK Unmodified 1904.0255 0.025493054 4641 Q9NU22 MDN1 Midasin yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 2 77.11 77.177 2 1.492E-05 88998 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 65.563 59.591 25519000 0 0 0 0 2419100 1786100 2929100 3496800 0 3997200 3987500 0 3424100 3478800 0 59096 4641 53127 499291;499292;499293;499294;499295;499296;499297;499298;499299;499300 396055;396056;396057;396058;396059;396060;396061 396058 7 VVSEDFLQDVSASTK Unmodified 1623.7992 0.79918151 894 P09874 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 78.143 77.834 2 4.0806E-28 90251 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 173.04 163.6 1716800000 0 106850000 0 56782000 84305000 137420000 98022000 110660000 80386000 217870000 196320000 161710000 110170000 123650000 232690000 59097 894 53128 499301;499302;499303;499304;499305;499306;499307;499308;499309;499310;499311;499312;499313 396062;396063;396064;396065;396066;396067;396068;396069;396070;396071;396072;396073;396074 396071 12 VVSEIPVLK Unmodified 982.60628 0.60628277 5159 Q9Y3C8 UFC1 Ubiquitin-fold modifier-conjugating enzyme 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.881 66.964 2 0.011979 77711 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 61.999 50.23 203140000 0 0 0 10178000 7233800 24340000 10764000 8952700 7158400 21123000 21572000 21746000 14403000 16449000 39225000 59098 5159 53129 499314;499315;499316;499317;499318;499319;499320;499321;499322;499323;499324;499325 396075;396076;396077;396078;396079 396078 5 VVSETNDTK Unmodified 991.4822 0.48220447 814 P05783 KRT18 Keratin, type I cytoskeletal 18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.42 3.82 2 3 1 13 3 2 1 1 1 1 2 1 1 1 1 1 1 1 1 18.098 17.787 2 3.3953E-28 3648 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 178.3 154.09 531580000 199000000 125010000 6746000 14882000 17518000 36960000 33351000 30432000 24941000 12240000 10303000 0 12303000 7893800 0 59099 814 53130 499326;499327;499328;499329;499330;499331;499332;499333;499334;499335;499336;499337;499338;499339;499340;499341;499342;499343;499344 396080;396081;396082;396083;396084;396085;396086;396087;396088;396089;396090;396091;396092;396093;396094;396095 396082 16 VVSFLEK Unmodified 820.46945 0.46945494 4627 Q9NSG2 C1orf112 Uncharacterized protein C1orf112 yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 58.052 51.993 2 0.043702 65152 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 79.116 45.378 24766000 16586000 0 8180300 0 0 0 0 0 0 0 0 0 0 0 0 59100 4627 53131 499345;499346 396096 396096 1 VVSGAEAELK Unmodified 1001.5393 0.53932542 462 O75147 OBSL1 Obscurin-like protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 28.339 28.64 2 0.011466 29865 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.191 23.687 67514000 0 0 0 0 0 22192000 4143600 3302500 2587500 6196900 6679100 5521900 7789500 3769400 5331200 59101 462 53132 499347;499348;499349;499350;499351;499352;499353;499354;499355;499356 396097 396097 1 VVSGNVEPK Unmodified 927.50255 0.50254598 2195 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.76 14.928 2 0.017618 13708 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.531 20.235 99887000 0 0 0 5685800 4449600 5801400 6274400 4805500 5439500 9543600 10681000 12641000 9199400 11022000 14344000 59102 2195 53133 499357;499358;499359;499360;499361;499362;499363;499364;499365;499366;499367;499368 396098;396099;396100;396101 396099 4 VVSHLIEK Unmodified 923.54402 0.54401687 5182 Q9Y446 PKP3 Plakophilin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 22.074 22.238 2 0.017697 22439 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 65.246 12.844 70333000 0 0 0 5098300 3294200 6567700 5575300 7583500 6266700 6307400 8069700 7023600 6835200 7711400 0 59103 5182 53134 499369;499370;499371;499372;499373;499374;499375;499376;499377;499378;499379 396102;396103;396104;396105;396106 396106 5 VVSHSGSAGLSQVR Unmodified 1382.7266 0.72662569 2935 Q6P4R8 NFRKB Nuclear factor related to kappa-B-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 21.576 21.812 3 0.002777 22708 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 45.825 31.194 85891000 0 0 0 0 7503000 8311100 9543900 0 8034200 11222000 7555700 13477000 7338500 0 12906000 59104 2935 53135 499380;499381;499382;499383;499384;499385;499386;499387;499388 396107;396108;396109;396110 396109 4 VVSISSEHLEPITPTK Unmodified 1735.9356 0.93561541 136 O00267 SUPT5H Transcription elongation factor SPT5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.76 3 1 23 1 2 1 2 2 2 2 2 1 2 2 2 2 2 2 64.855 64.105 2;3 1.0673E-20 73527 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 117.98 104.07 1450900000 35298000 724150000 131170000 26644000 26209000 42290000 32095000 23287000 29704000 36885000 55391000 73933000 66679000 66860000 80308000 59105 136 53136 499389;499390;499391;499392;499393;499394;499395;499396;499397;499398;499399;499400;499401;499402;499403;499404;499405;499406;499407;499408;499409;499410;499411;499412;499413;499414;499415 396111;396112;396113;396114;396115;396116;396117;396118;396119;396120;396121;396122;396123;396124;396125;396126;396127;396128;396129;396130;396131;396132;396133 396128 18 VVSLEAELQDISSQESK Unmodified 1860.9317 0.93165225 3639 Q92614 MYO18A Unconventional myosin-XVIIIa yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 88.813 85.299 2 0.0071476 101918 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 67.519 61.674 44178000 0 43215000 963120 0 0 0 0 0 0 0 0 0 0 0 0 59106 3639 53137 499416;499417;499418 396134;396135 396135 2 VVSLLDSTSSMHNK Unmodified 1516.7555 0.75554256 3215 Q8IUC4;A8MT19 RHPN2;RHPN2P1 Rhophilin-2;Putative rhophilin-2-like protein RHPN2P1 yes no 0 0 0 By MS/MS 2 0 1 1 62.186 53.931 3 0.044492 72847 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 28.351 17.621 25604000 25604000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59107 3215 53138 499419 396136 396136 1 VVSLLDSTSSMHNK Oxidation (M) 1532.7505 0.75045718 3215 Q8IUC4;A8MT19 RHPN2;RHPN2P1 Rhophilin-2;Putative rhophilin-2-like protein RHPN2P1 yes no 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 48.285 42.408 3 0.015104 58781 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.751 31.557 23142000 14292000 0 8849700 0 0 0 0 0 0 0 0 0 0 0 0 59108 3215 53138 499420;499421 396137 396137 4833 0 VVSLSTPIIWR Unmodified 1269.7445 0.74450759 4339 Q9H0U9 TSPYL1 Testis-specific Y-encoded-like protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 85.091 85.19 2 0.0052839 98473 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.216 41.768 36857000 0 0 0 0 1701200 3318900 0 3829300 2845000 4586000 3676600 5329200 2714100 2784000 6072200 59109 4339 53139 499422;499423;499424;499425;499426;499427;499428;499429;499430;499431 396138;396139;396140;396141 396139 4 VVSNDDGSISYESR Unmodified 1526.6849 0.68488004 17 A3KN83 SBNO1 Protein strawberry notch homolog 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 33.162 33.305 2 0.0011631 36555 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 73.499 63.128 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59110 17 53140 499432;499433 396142;396143 396142 2 VVSNFMDFDETGVLK Oxidation (M) 1715.8076 0.80763771 4334 Q9H0P0 NT5C3A Cytosolic 5'-nucleotidase 3A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 79.629 78.973 2 1.0846E-22 97302 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.55 104.02 174470000 0 65418000 1783300 8221200 8385500 9572300 6233000 8625100 7675900 9892000 11698000 11428000 9054000 5260900 11220000 59111 4334 53141 499434;499435;499436;499437;499438;499439;499440;499441;499442;499443;499444;499445;499446;499447;499448 396144;396145;396146;396147;396148;396149;396150;396151;396152;396153;396154;396155;396156;396157;396158 396148 5797 14 VVSNLPAITMEEVAPVSVSDAALLAPEEIK Unmodified 3091.6363 0.63626886 169 O00566 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 yes yes 0 0 0 By MS/MS 2 0 1 1 99.63 94.917 3 2.345E-15 117368 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.675 56.968 27770000 0 27770000 0 0 0 0 0 0 0 0 0 0 0 0 0 59112 169 53142 499449 396159 396159 1 VVSPGIDLSGLTLQSNAPSSMMVK 2 Oxidation (M) 2462.2397 0.23966128 2298 Q13485 SMAD4 Mothers against decapentaplegic homolog 4 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 84.78 84.862 3 5.2645E-06 98337 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 42.384 34.851 25524000 0 0 0 0 0 9140000 0 0 0 11550000 0 0 0 4833900 0 59113 2298 53143 499450;499451;499452 396160 396160 3761;3762 1 VVSPPEPEK Unmodified 980.51786 0.51786169 3308 Q8N163 CCAR2 Cell cycle and apoptosis regulator protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.88 3.69 2 2 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 27.093 26.546 2 0.021764 34649 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.665 33.396 342660000 20946000 81865000 0 15018000 10894000 23115000 15213000 17824000 16572000 22167000 22927000 25384000 24494000 21501000 24736000 59114 3308 53144 499453;499454;499455;499456;499457;499458;499459;499460;499461;499462;499463;499464;499465;499466;499467;499468 396161;396162;396163;396164;396165;396166 396163 5 VVSPPEPEKEEAAK Unmodified 1508.7722 0.77223848 3308 Q8N163 CCAR2 Cell cycle and apoptosis regulator protein 2 yes yes 0 0 1 By MS/MS By matching 10 0 2 1 1 27.632 28.324 3 0.019198 29843 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 26.729 17.679 21055000 0 0 0 0 0 0 0 0 0 0 0 11794000 0 0 9261400 59115 3308 53145 499469;499470 396167 396167 1 VVSPTISSPVCQEQLIEAGK Unmodified 2141.1038 0.10381973 5201 Q9Y4G6 TLN2 Talin-2 yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 79.971 75.706 2;3 0.00018129 94200 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 51.196 41.912 175800000 0 175800000 0 0 0 0 0 0 0 0 0 0 0 0 0 59116 5201 53146 499471;499472;499473 396168;396169 396169 2 VVSPWNSEDAK Unmodified 1230.5881 0.58806652 937 P11177 PDHB Pyruvate dehydrogenase E1 component subunit beta, mitochondrial yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 48.241 42.979 2 0.046191 55723 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 55.235 28.12 93820000 0 93820000 0 0 0 0 0 0 0 0 0 0 0 0 0 59117 937 53147 499474;499475 396170 396170 1 VVSQLLR Unmodified 813.50724 0.50723743 1234 P28340 POLD1 DNA polymerase delta catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 41.529 41.659 2 0.046966 46056 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 65.672 16.912 160760000 0 0 0 10782000 11979000 0 20157000 0 11857000 16860000 20416000 27603000 22534000 18574000 0 59118 1234 53148 499476;499477;499478;499479;499480;499481;499482;499483;499484 396171 396171 1 VVSQYSSLLSPMSVNAVMK Oxidation (M) 2055.038 0.03804835 1642 P50991 CCT4 T-complex protein 1 subunit delta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 9.25 2.26 1 1 18 2 1 1 1 2 1 2 3 1 1 2 3 83.533 83.195 2;3 9.362E-42 96241 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 120.84 94.18 363860000 0 156330000 0 1266100 5850100 8683700 8495800 10580000 9458200 33165000 7440600 15080000 0 18773000 88733000 59119 1642 53149 499485;499486;499487;499488;499489;499490;499491;499492;499493;499494;499495;499496;499497;499498;499499;499500;499501;499502;499503;499504 396172;396173;396174;396175;396176;396177;396178;396179;396180 396173 2651;2652 7 VVSQYSSLLSPMSVNAVMK Unmodified 2039.0431 0.043133728 1642 P50991 CCT4 T-complex protein 1 subunit delta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.82 3.56 3 8 1 2 1 2 1 1 1 2 89.789 88.265 2;3 1.5707E-09 110749 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 127.36 113.93 450370000 34803000 369240000 0 0 0 1310300 0 3559900 0 4056800 2714000 0 0 1296900 33397000 59120 1642 53149 499505;499506;499507;499508;499509;499510;499511;499512;499513;499514;499515 396181;396182;396183;396184;396185;396186;396187 396186 7 VVSQYSSLLSPMSVNAVMK 2 Oxidation (M) 2071.033 0.032962972 1642 P50991 CCT4 T-complex protein 1 subunit delta yes yes 0 2 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.69 1.54 1 25 1 2 2 3 3 2 2 3 2 2 2 2 77.715 77.627 2;3 1.6292E-53 89620 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 146.59 133.18 685420000 0 23634000 0 0 52349000 67027000 75972000 52316000 31693000 34643000 89646000 92003000 38971000 48737000 78430000 59121 1642 53149 499516;499517;499518;499519;499520;499521;499522;499523;499524;499525;499526;499527;499528;499529;499530;499531;499532;499533;499534;499535;499536;499537;499538;499539;499540;499541 396188;396189;396190;396191;396192;396193;396194;396195;396196;396197;396198;396199;396200;396201 396199 2651;2652 12 VVSSEGGRPSVDLSFQPSQPLSK Unmodified 2400.2285 0.22850297 1602 P49815 TSC2 Tuberin yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 72.58 72.674 3 3.7989E-29 83708 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 88.627 80.803 71369000 0 0 0 0 9123800 10796000 7649200 0 11518000 0 13626000 0 0 7947200 10709000 59122 1602 53150 499542;499543;499544;499545;499546;499547;499548;499549 396202;396203;396204;396205;396206;396207;396208 396203 7 VVSSIEQK Unmodified 888.49165 0.49164694 1940 P63104 YWHAZ 14-3-3 protein zeta/delta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 14.779 14.949 2 0.004618 13702 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 130.77 98.83 2608300000 0 0 0 101260000 39075000 73899000 84608000 64737000 48716000 119240000 502630000 306340000 118590000 345600000 803630000 59123 1940 53151 499550;499551;499552;499553;499554;499555;499556;499557;499558;499559;499560;499561 396209;396210;396211;396212;396213;396214;396215;396216;396217;396218;396219;396220 396212 9 VVSSSIVDK Unmodified 932.51786 0.51786169 1898 P62333 PSMC6 26S protease regulatory subunit 10B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 27.111 26.079 2 0.013227 28589 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 60.118 32.981 1860300000 67354000 1218600000 16939000 36882000 63851000 11321000 26283000 22013000 13904000 94451000 105910000 113650000 23372000 0 45772000 59124 1898 53152 499562;499563;499564;499565;499566;499567;499568;499569;499570;499571;499572;499573;499574;499575;499576 396221;396222;396223;396224;396225;396226;396227;396228;396229 396229 7 VVSTFGVIFDPVK Unmodified 1406.781 0.78095267 4814 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 89.118 89.228 2 0.0010046 103222 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.595 51.335 46700000 0 0 0 0 2420100 4080900 2839700 3463500 2818500 5475100 5682900 6297300 0 5175700 8446800 59125 4814 53153 499577;499578;499579;499580;499581;499582;499583;499584;499585;499586 396230;396231;396232;396233;396234;396235;396236;396237;396238;396239 396233 9 VVSTHEQIVR Unmodified 1166.6408 0.6407708 97 CON__Q61782 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 22.899 22.967 2;3 0.012647 24211 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 47.559 8.4113 + 580940000 0 0 0 498680000 29275000 6622700 0 0 0 0 20268000 0 0 26092000 0 59126 97 53154 499587;499588;499589;499590;499591 396240;396241;396242;396243;396244 396243 3 VVSTHEQVLR Unmodified 1166.6408 0.6407708 56 CON__P02533;P02533 KRT14 Keratin, type I cytoskeletal 14 yes no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching 10 0 18 1 1 2 2 3 2 1 2 2 1 1 22.612 22.848 2;3 0.0042261 24086 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 100.48 10.368 + 800590000 0 0 0 0 3772300 25189000 29031000 165660000 31675000 55619000 4021700 49084000 423110000 5435400 7989000 59127 56 53155 499592;499593;499594;499595;499596;499597;499598;499599;499600;499601;499602;499603;499604;499605;499606;499607;499608;499609 396245;396246;396247;396248;396249;396250 396247 1 VVSTLPSTVLGK Unmodified 1199.7125 0.71253876 4961 Q9UKD1 GMEB2 Glucocorticoid modulatory element-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.714 67.797 2 0.0063596 77766 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 51.436 36.285 136850000 0 0 0 11446000 7236700 9448600 12511000 11695000 8277300 12869000 16691000 13147000 10653000 9762200 13116000 59128 4961 53156 499610;499611;499612;499613;499614;499615;499616;499617;499618;499619;499620;499621 396251;396252;396253;396254;396255;396256;396257;396258;396259;396260 396255 10 VVSVQLGDGTR Unmodified 1129.6091 0.60913632 3312 Q8N1G0 ZNF687 Zinc finger protein 687 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.717 43.892 2 0.00048058 48040 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 83.883 57.989 132360000 0 0 0 8869800 7827700 10586000 9030000 7234600 7297000 13802000 12693000 14665000 18933000 7911300 13509000 59129 3312 53157 499622;499623;499624;499625;499626;499627;499628;499629;499630;499631;499632;499633 396261;396262;396263;396264;396265;396266;396267;396268;396269;396270;396271;396272 396268 12 VVTAAAQAK Unmodified 857.49707 0.49706667 2289 Q13428 TCOF1 Treacle protein yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9.7454 9.416 2 0.0080683 8288 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 70.69 36.837 335780000 0 174970000 2935200 15837000 12397000 11543000 16316000 13960000 9636500 12751000 0 25547000 12796000 10251000 16834000 59130 2289 53158 499634;499635;499636;499637;499638;499639;499640;499641;499642;499643;499644;499645;499646;499647 396273;396274;396275 396273 3 VVTAGSAILQK Unmodified 1085.6445 0.64445919 2863 Q69YN4 KIAA1429 Protein virilizer homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 45.56 45.673 2 0.0136 50065 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.39 21.571 51481000 0 0 0 3344000 4016900 7116000 4348300 5804000 0 5807100 5925500 0 4528500 4522900 6067500 59131 2863 53159 499648;499649;499650;499651;499652;499653;499654;499655;499656;499657 396276;396277;396278;396279;396280;396281;396282;396283 396278 8 VVTATLWGEDADK Unmodified 1403.6933 0.69325988 1221 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.75 3.85 4 1 7 1 3 1 1 1 1 1 1 1 1 67.608 65.896 2 3.7366E-25 83687 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 185.77 168.86 2136500000 13004000 451740000 6857600 0 0 159660000 0 0 0 245400000 290980000 299490000 227600000 169450000 272350000 59132 1221 53160 499658;499659;499660;499661;499662;499663;499664;499665;499666;499667;499668;499669 396284;396285;396286;396287;396288;396289;396290;396291;396292;396293;396294;396295 396287 12 VVTDTDETELAR Unmodified 1347.6518 0.65178899 804 P05198 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 37.68 37.168 2 1.9369E-20 41311 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 182.92 170.72 517020000 0 42357000 0 44607000 0 63252000 56686000 42003000 46679000 0 0 0 88927000 0 132510000 59133 804 53161 499670;499671;499672;499673;499674;499675;499676;499677;499678;499679;499680 396296;396297;396298;396299;396300;396301;396302;396303;396304;396305;396306 396303 11 VVTGVANALAHR Unmodified 1206.6833 0.68330431 89 CON__Q3SX09 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 2 1 1 1 1 1 1 1 1 1 44.873 45.044 2;3 7.6038E-05 49154 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.363 71.109 + 244570000 0 0 0 11959000 16435000 16976000 13163000 20315000 11782000 21584000 27124000 32229000 27716000 20922000 24370000 59134 89 53162 499681;499682;499683;499684;499685;499686;499687;499688;499689;499690;499691;499692;499693 396307;396308;396309;396310;396311;396312;396313;396314;396315;396316;396317;396318;396319;396320;396321;396322 396312 16 VVTHVQSGTAEHRPR Unmodified 1672.8757 0.87574954 4288 Q9C0D5 TANC1 Protein TANC1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 2 1 1 2 9.2626 9.5298 3;4 0.0022515 8006 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.328 43.611 83616000 0 0 0 0 0 0 0 5201900 0 0 24274000 27787000 7524600 6348300 12480000 59135 4288 53163 499694;499695;499696;499697;499698;499699;499700;499701 396323;396324;396325;396326;396327;396328 396328 3 VVTLLSDPENIVK Unmodified 1425.8079 0.80789571 4024 Q99570 PIK3R4 Phosphoinositide 3-kinase regulatory subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 82.333 81.217 2 4.3356E-08 93783 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 104.52 85.743 587260000 7165400 406370000 6191500 5439100 9001200 15218000 8635300 14042000 9481300 19128000 21028000 20339000 9978000 14723000 20525000 59136 4024 53164 499702;499703;499704;499705;499706;499707;499708;499709;499710;499711;499712;499713;499714;499715;499716;499717 396329;396330;396331;396332;396333;396334;396335;396336;396337;396338;396339 396332 10 VVTQLTGTLPSGVTEDDVAIHSNSR Unmodified 2595.314 0.31402351 4426 Q9H6U6 BCAS3 Breast carcinoma-amplified sequence 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 75.528 75.593 3 6.018E-93 87253 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 112.23 109.46 39584000 0 0 0 0 4209500 0 2892100 6589800 0 13128000 6306400 0 6458800 0 0 59137 4426 53165 499718;499719;499720;499721;499722;499723 396340;396341;396342;396343;396344;396345;396346 396340 7 VVTQNICQYR Unmodified 1279.6343 0.63430521 3308 Q8N163 CCAR2 Cell cycle and apoptosis regulator protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.493 39.672 2 8.4675E-32 44511 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 179.73 164.58 199370000 0 0 0 7807200 13824000 13803000 11810000 14408000 13304000 16629000 20709000 25096000 17452000 20889000 23642000 59138 3308 53166 499724;499725;499726;499727;499728;499729;499730;499731;499732;499733;499734;499735 396347;396348;396349;396350;396351;396352;396353;396354;396355;396356;396357 396357 11 VVTQRSEIGEK Unmodified 1244.6725 0.67246486 2759 Q5SW79 CEP170 Centrosomal protein of 170 kDa yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 16.831 13.465 3 0.0043198 19405 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.198 17.216 62799000 20039000 16262000 26498000 0 0 0 0 0 0 0 0 0 0 0 0 59139 2759 53167 499736;499737;499738 396358;396359;396360 396358 2 VVTRHPDLK Unmodified 1063.6138 0.61382777 784 P04632 CAPNS1 Calpain small subunit 1 yes yes 0 0 1 By MS/MS 2 0 1 1 17.623 13.243 2 0.010012 19622 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 143.04 102.93 114490000 114490000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59140 784 53168 499739 396361 396361 0 VVTSEDQVQEGTK Unmodified 1418.6889 0.68890278 3574 Q8WWK9 CKAP2 Cytoskeleton-associated protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.973 21.184 2 7.0864E-08 21511 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 118.4 105.83 62200000 0 0 0 3962800 3424800 5366200 5229000 0 3131000 6149100 6270600 10445000 5533800 4869000 7819100 59141 3574 53169 499740;499741;499742;499743;499744;499745;499746;499747;499748;499749;499750;499751 396362;396363;396364;396365;396366;396367;396368;396369;396370;396371;396372;396373 396367 12 VVTSENEAGK Unmodified 1032.5088 0.50875357 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.57 3.85 2 2 10 1 2 1 1 1 1 1 1 1 1 1 1 1 21.73 21.851 2 0.00034066 93100 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 118.32 75.052 181070000 44922000 72130000 2119800 3591400 3247100 3928700 6024100 4064500 5267900 0 0 6027800 5670400 7113700 16961000 59142 1564 53170 499752;499753;499754;499755;499756;499757;499758;499759;499760;499761;499762;499763;499764;499765 396374;396375;396376;396377;396378;396379 396377 3 VVTTNYKPVANHQYNIEYERK Unmodified 2565.2976 0.29758559 992 P13984 GTF2F2 General transcription factor IIF subunit 2 yes yes 0 0 2 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 45.669 46.099 4 0.001018 50601 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.012 28.495 60995000 0 0 0 0 0 0 14824000 15082000 0 0 0 13160000 0 0 17929000 59143 992 53171 499766;499767;499768;499769 396380;396381 396380 2 VVTVGQFK Unmodified 876.5069 0.50690308 4850 Q9UBQ0 VPS29 Vacuolar protein sorting-associated protein 29 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 3.8 3.12 3 1 1 1 2 1 1 46.681 42.391 2 0.0068826 46294 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 92.467 53.248 2989300000 1043900000 1815700000 53987000 0 0 0 0 0 0 0 0 0 0 0 75702000 59144 4850 53172 499770;499771;499772;499773;499774 396382;396383;396384;396385;396386 396383 3 VVTVHLEK Unmodified 923.54402 0.54401687 5087 Q9Y266 NUDC Nuclear migration protein nudC yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 37.149 32.196 2 0.03245 45675 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.184 15.365 1254100000 827060000 0 427010000 0 0 0 0 0 0 0 0 0 0 0 0 59145 5087 53173 499775;499776 396387 396387 1 VVTVSEYYLRPVSQQEFDK Unmodified 2286.1532 0.15321276 3686 Q92917 GPKOW G patch domain and KOW motifs-containing protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.328 77.385 3 9.3601E-42 89444 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 120.92 114.12 352530000 0 0 0 5760700 8544000 19307000 10323000 18249000 25670000 36164000 40637000 36147000 9761400 28543000 113420000 59146 3686 53174 499777;499778;499779;499780;499781;499782;499783;499784;499785;499786;499787;499788 396388;396389;396390;396391;396392;396393;396394;396395;396396;396397;396398;396399;396400;396401;396402;396403 396400 16 VVTVVTTK Unmodified 845.52222 0.52221879 3041 Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.089 26.29 2 0.0093409 26414 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.206 61.075 1539900000 0 0 0 89474000 95782000 124710000 132060000 101920000 99518000 157360000 146230000 181290000 136740000 119130000 155700000 59147 3041 53175 499789;499790;499791;499792;499793;499794;499795;499796;499797;499798;499799;499800 396404;396405;396406;396407;396408;396409;396410;396411;396412;396413;396414 396406 10 VVTYGMANLLTGPK Oxidation (M) 1478.7803 0.78030075 4019 Q99536 VAT1 Synaptic vesicle membrane protein VAT-1 homolog yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69.215 67.824 2 3.0783E-06 77937 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 90.653 70.35 131910000 14971000 21107000 1935100 11626000 6568500 9845200 7275000 0 7830100 13211000 12450000 0 0 9361000 15735000 59148 4019 53176 499801;499802;499803;499804;499805;499806;499807;499808;499809;499810;499811;499812;499813;499814;499815 396415;396416;396417;396418;396419;396420;396421;396422;396423;396424;396425;396426;396427;396428;396429;396430;396431;396432;396433;396434 396426 5521 20 VVTYGMANLLTGPK Unmodified 1462.7854 0.78538612 4019 Q99536 VAT1 Synaptic vesicle membrane protein VAT-1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.6 3.67 3 7 1 1 1 1 1 1 1 1 1 1 83.558 82.031 2 6.8383E-08 94707 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 118.9 96.912 216420000 48507000 55394000 3791200 4807100 5273500 0 5742900 0 0 0 21362000 0 8677400 14128000 48741000 59149 4019 53176 499816;499817;499818;499819;499820;499821;499822;499823;499824;499825 396435;396436;396437;396438;396439;396440;396441;396442;396443;396444;396445 396438 10 VVVAENFDEIVNNENK Unmodified 1831.8952 0.89520716 1270 P30101 PDIA3 Protein disulfide-isomerase A3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.66 3.87 12 3 20 3 8 4 1 1 2 1 2 1 2 2 2 2 2 2 77.653 76.449 2;3 3.5781E-132 95600 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 232.42 227.14 11124000000 199760000 9937400000 126240000 4949000 8377600 9775000 21084000 33815000 9136100 66386000 181380000 126730000 34859000 68395000 295310000 59150 1270 53177 499826;499827;499828;499829;499830;499831;499832;499833;499834;499835;499836;499837;499838;499839;499840;499841;499842;499843;499844;499845;499846;499847;499848;499849;499850;499851;499852;499853;499854;499855;499856;499857;499858;499859;499860 396446;396447;396448;396449;396450;396451;396452;396453;396454;396455;396456;396457;396458;396459;396460;396461;396462;396463;396464;396465;396466;396467;396468;396469 396458 20 VVVCDNGTGFVK Unmodified 1293.6387 0.63872189 1836 P61160 ACTR2 Actin-related protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.83 3.67 3 1 2 1 2 1 1 1 53.121 48.712 2 1.6906E-05 55032 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 127.94 111.94 1477400000 35956000 1414700000 10554000 0 0 0 0 0 0 0 0 0 0 0 16181000 59151 1836 53178 499861;499862;499863;499864;499865;499866 396470;396471;396472;396473;396474;396475 396471 6 VVVDALSGLK Unmodified 999.59645 0.59644637 969 P12532 CKMT1A Creatine kinase U-type, mitochondrial yes yes 0 0 0 By MS/MS 10 0 1 1 68.751 68.085 2 0.029134 78687 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 43.442 18.81 19653000 0 0 0 19653000 0 0 0 0 0 0 0 0 0 0 0 59152 969 53179 499867 396476 396476 1 VVVDLSEQEEEK Unmodified 1402.6828 0.68275477 4727 Q9NXH9 TRMT1 tRNA (guanine(26)-N(2))-dimethyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 46.928 45.749 2 1.1398E-26 57146 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 180.67 137.59 330790000 16517000 220200000 0 0 3002500 6832900 4136600 5598000 4642400 7878200 10724000 12342000 8847100 9720500 20350000 59153 4727 53180 499868;499869;499870;499871;499872;499873;499874;499875;499876;499877;499878;499879;499880;499881 396477;396478;396479;396480;396481;396482;396483;396484;396485;396486;396487;396488;396489;396490;396491 396481 15 VVVEPPEGEEK Unmodified 1210.6081 0.60813326 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 35.606 34.933 2 0.00025275 37538 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 105.52 86.268 465500000 2540000 27358000 0 32738000 22561000 36086000 29921000 32561000 30569000 37512000 45052000 39039000 50037000 33432000 46097000 59154 2451 53181 499882;499883;499884;499885;499886;499887;499888;499889;499890;499891;499892;499893;499894;499895;499896 396492;396493;396494;396495;396496;396497;396498;396499;396500;396501;396502;396503;396504;396505;396506;396507;396508;396509;396510;396511;396512;396513;396514 396500 21 VVVEQLNLLVK Unmodified 1252.7755 0.77547336 1338 P34949 MPI Mannose-6-phosphate isomerase yes yes 0 0 0 By MS/MS By MS/MS By matching 2 0 3 1 1 1 87.822 82.687 2 0.00043804 104091 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.01 80.902 27927000 5413900 21324000 1189100 0 0 0 0 0 0 0 0 0 0 0 0 59155 1338 53182 499897;499898;499899 396515;396516 396515 2 VVVEYHEELPALK Unmodified 1524.8188 0.81879474 2699 Q53F19 C17orf85 Uncharacterized protein C17orf85 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 68.464 68.606 3 0.011016 78669 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 39.006 35.501 50767000 0 0 0 0 3879100 5337800 4143000 2577500 6589500 6529600 7764000 6429200 0 0 7516900 59156 2699 53183 499900;499901;499902;499903;499904;499905;499906;499907;499908 396517;396518 396517 2 VVVHQETEIADE Unmodified 1367.6569 0.65687437 935 P11171 EPB41 Protein 4.1 yes yes 0 0 0 By MS/MS 2 0 1 1 41.103 36.051 2 5.1027E-05 46465 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.815 84.664 184920000 0 184920000 0 0 0 0 0 0 0 0 0 0 0 0 0 59157 935 53184 499909 396519 396519 1 VVVIPYVSSR Unmodified 1117.6495 0.64954457 3159 Q86V21 AACS Acetoacetyl-CoA synthetase yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 73.846 74.076 2 0.0056999 84785 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.897 52.637 27565000 0 0 0 0 0 0 0 1042000 0 0 4498300 5248700 0 2827900 13948000 59158 3159 53185 499910;499911;499912;499913;499914 396520;396521;396522;396523 396520 4 VVVLGLLPR Unmodified 964.64334 0.64333698 2497 Q15102 PAFAH1B3 Platelet-activating factor acetylhydrolase IB subunit gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 83.654 83.794 2 0.025695 96505 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.127 43.488 73847000 0 0 0 0 0 8434700 2840100 2649500 2539400 7200900 7452700 10312000 3397100 6664700 22356000 59159 2497 53186 499915;499916;499917;499918;499919;499920;499921;499922;499923;499924 396524;396525 396524 2 VVVLGSGGVGK Unmodified 970.58113 0.58113065 5170 Q9Y3L5;P61225;P10114 RAP2C;RAP2B;RAP2A Ras-related protein Rap-2c;Ras-related protein Rap-2b;Ras-related protein Rap-2a yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.71 3.81 2 1 4 1 2 1 1 1 1 48.094 42.012 2 0.0028041 57684 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 116.05 80.171 75627000 30175000 45452000 0 0 0 0 0 0 0 0 0 0 0 0 0 59160 5170 53187 499925;499926;499927;499928;499929;499930;499931 396526;396527;396528;396529;396530;396531;396532 396528 6 VVVLGTPAEEDGGGK Unmodified 1426.7304 0.73037367 3286 Q8IYS1 PM20D2 Peptidase M20 domain-containing protein 2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 52.759 47.415 2 5.4737E-10 61432 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 135.99 126.63 155090000 0 155090000 0 0 0 0 0 0 0 0 0 0 0 0 0 59161 3286 53188 499932;499933 396533;396534 396533 2 VVVLMGSTSDLGHCEK Unmodified 1730.8331 0.83314095 1135 P22234 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 1 2 2 1 1 2 59.736 59.927 2;3 1.6779E-12 68083 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 98.105 67.233 164510000 0 0 0 4775100 2776800 7928400 0 5159400 4358500 6598100 21266000 26127000 6610700 15894000 63021000 59162 1135 53189 499934;499935;499936;499937;499938;499939;499940;499941;499942;499943;499944;499945;499946;499947 396535;396536;396537;396538;396539;396540;396541;396542;396543;396544;396545 396543 11 VVVLMGSTSDLGHCEK Oxidation (M) 1746.8281 0.82805557 1135 P22234 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 53.538 47.504 3 0.0097705 59734 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 42.242 36.261 13377000 7115100 0 6262200 0 0 0 0 0 0 0 0 0 0 0 0 59163 1135 53189 499948;499949 396546 396546 1628 0 VVVLSPGTLQEDQATLLSK Unmodified 1997.1045 0.10447166 314 O43299 AP5Z1 AP-5 complex subunit zeta-1 yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 89.423 85.089 2;3 7.6124E-85 105830 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 172.57 159.59 53966000 0 53966000 0 0 0 0 0 0 0 0 0 0 0 0 0 59164 314 53190 499950;499951;499952 396547;396548;396549;396550 396547 3 VVVPATEEEAEVDEFPTDGEMSAQEEDR Oxidation (M) 3123.335 0.33501405 167 O00541 PES1 Pescadillo homolog yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 2 75.675 75.612 3 5.56E-17 86522 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 63.701 61.227 91779000 0 0 0 9906500 25556000 18939000 12641000 0 0 0 13652000 0 0 11084000 0 59165 167 53191 499953;499954;499955;499956;499957;499958;499959;499960 396551;396552;396553;396554;396555;396556;396557;396558 396555 233 8 VVVPATEEEAEVDEFPTDGEMSAQEEDR Unmodified 3107.3401 0.34009943 167 O00541 PES1 Pescadillo homolog yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 78.844 78.82 3 3.4147E-14 90862 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.824 50.63 12429000 0 0 0 0 4604500 0 0 0 0 0 0 0 0 0 7824800 59166 167 53191 499961;499962 396559 396559 1 VVVPATEEEAEVDEFPTDGEMSAQEEDRRK Oxidation (M) 3407.5311 0.5310881 167 O00541 PES1 Pescadillo homolog yes yes 0 1 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 67.476 67.627 4 4.3278E-83 76818 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 114.83 109.62 228810000 0 0 0 0 13820000 33801000 8337400 23957000 16155000 33097000 25078000 31214000 0 14608000 28741000 59167 167 53192 499963;499964;499965;499966;499967;499968;499969;499970;499971;499972 396560;396561;396562;396563;396564;396565;396566;396567;396568;396569 396563 233 10 VVVPATEEEAEVDEFPTDGEMSAQEEDRRK Unmodified 3391.5362 0.53617347 167 O00541 PES1 Pescadillo homolog yes yes 0 0 2 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 73.239 72.199 4 3.326E-08 83667 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 37.637 35.511 101950000 11440000 0 0 0 3944900 0 0 6728000 0 16656000 19132000 16845000 0 0 27200000 59168 167 53192 499973;499974;499975;499976;499977;499978;499979 396570;396571;396572;396573 396570 4 VVVPIYCTSFLAVEEDK Unmodified 1967.9914 0.99141573 3249 Q8IWX8 CHERP Calcium homeostasis endoplasmic reticulum protein yes yes 0 0 0 By MS/MS 2 0 1 1 95.791 90.926 2 0.00074471 112764 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.17 94.331 9153200 0 9153200 0 0 0 0 0 0 0 0 0 0 0 0 0 59169 3249 53193 499980 396574 396574 1 VVVPPLPGK Unmodified 904.57459 0.57458871 404 O60493 SNX3 Sorting nexin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 61.224 61.382 2 0.019933 70774 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 53.554 26.592 523530000 0 0 0 26384000 0 46923000 46837000 28546000 24343000 72421000 52967000 50551000 45945000 45418000 83194000 59170 404 53194 499981;499982;499983;499984;499985;499986;499987;499988;499989;499990;499991 396575;396576;396577;396578;396579;396580;396581 396581 6 VVVQEVVVTQK Unmodified 1226.7234 0.72343779 3666 Q92817 EVPL Envoplakin yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 55.226 49.879 2 0.0081369 64298 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.276 57.039 23773000 0 23773000 0 0 0 0 0 0 0 0 0 0 0 0 0 59171 3666 53195 499992;499993 396582 396582 1 VVVQVLAEEPEAVLK Unmodified 1621.9291 0.92907347 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.77 3.89 1 12 3 23 5 8 3 1 2 2 2 2 2 2 2 2 2 2 2 85.896 84.976 2;3 1.0627E-44 102206 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 155.97 132.6 10583000000 738600000 8581600000 257670000 0 31696000 103400000 43498000 29867000 44471000 187130000 104790000 88735000 28078000 88558000 255280000 59172 1565 53196 499994;499995;499996;499997;499998;499999;500000;500001;500002;500003;500004;500005;500006;500007;500008;500009;500010;500011;500012;500013;500014;500015;500016;500017;500018;500019;500020;500021;500022;500023;500024;500025;500026;500027;500028;500029;500030;500031;500032 396583;396584;396585;396586;396587;396588;396589;396590;396591;396592;396593;396594;396595;396596;396597;396598;396599;396600;396601;396602;396603;396604;396605;396606;396607;396608;396609;396610;396611;396612;396613;396614;396615 396608 30 VVVRNLNK Unmodified 940.5818 0.58179936 1171 P23921 RRM1 Ribonucleoside-diphosphate reductase large subunit yes yes 0 0 1 By MS/MS 2 0 1 1 21.809 16.99 2 0.034089 24544 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 128.86 96.906 28904000 28904000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59173 1171 53197 500033 396616 396616 0 VVVSGLPPSGSWQDLK Unmodified 1667.8883 0.88827129 2145 Q07955 SRSF1 Serine/arginine-rich splicing factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 80.132 80.239 2 0.00067913 92626 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 59.84 50.352 45335000 0 0 0 0 2794700 2452700 2404400 4252200 2708000 0 6617000 5404500 0 5095800 13605000 59174 2145 53198 500034;500035;500036;500037;500038;500039;500040;500041;500042 396617;396618;396619;396620 396619 4 VVVSTNIAETSLTIDGVVFVIDPGFAK Unmodified 2790.5055 0.50551268 295 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.5 0.5 2 2 2 1 1 101.21 96.819 3 0.004108 101560 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 27.89 25.607 28595000 24717000 2325500 1552300 0 0 0 0 0 0 0 0 0 0 0 0 59175 295 53199 500043;500044;500045;500046 396621;396622;396623;396624;396625 396621 5 VVVTEVKEEDAFYSK Unmodified 1741.8774 0.87743183 4978 Q9UKX7 NUP50 Nuclear pore complex protein Nup50 yes yes 0 0 1 By MS/MS 3 0 1 1 62.745 57.98 3 0.043194 71099 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 30.961 25.066 4807900 0 4807900 0 0 0 0 0 0 0 0 0 0 0 0 0 59176 4978 53200 500047 396626 396626 1 VVVTMEHSAK Unmodified 1099.5696 0.56957969 1774 P55809 OXCT1 Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial yes yes 0 0 0 By MS/MS By matching By MS/MS 2 0 4 2 1 1 25.453 21.098 2 0.0021147 26860 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 107.57 92.314 60711000 29758000 19499000 11454000 0 0 0 0 0 0 0 0 0 0 0 0 59177 1774 53201 500048;500049;500050;500051 396627;396628;396629;396630 396629 4 VVVTMEHSAK Oxidation (M) 1115.5645 0.56449431 1774 P55809 OXCT1 Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 11.894 8.7361 2 0.0083484 11386 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 76.1 65.686 32665000 3192200 20052000 9420500 0 0 0 0 0 0 0 0 0 0 0 0 59178 1774 53201 500052;500053;500054 396631;396632;396633 396633 2894 3 VVVTVEQTEEELER Unmodified 1658.8363 0.8362953 269 O15269 SPTLC1 Serine palmitoyltransferase 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 70.85 70.726 2 3.0618E-05 81397 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 85.958 75.726 7714600 0 0 0 0 1586600 3222900 0 0 0 2905100 0 0 0 0 0 59179 269 53202 500055;500056;500057;500058;500059 396634;396635;396636;396637 396634 4 VVVVAGETGSGK Unmodified 1101.603 0.60298831 3095 Q7Z478 DHX29 ATP-dependent RNA helicase DHX29 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.047 26.248 2 0.0005662 28380 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 77.662 65.456 44413000 0 0 0 3383600 2591400 4433800 3895200 2609300 2694900 4174300 4499700 5624200 4052700 2784700 3668900 59180 3095 53203 500060;500061;500062;500063;500064;500065;500066;500067;500068;500069;500070;500071 396638;396639;396640;396641;396642;396643;396644;396645;396646;396647;396648;396649 396638 12 VVVVGDQSAGK Unmodified 1057.5768 0.57677356 394 O60313 OPA1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 24.051 24.298 2 0.014628 26002 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 45.368 27.982 15476000 0 0 0 0 0 0 3182700 0 3293800 0 4256300 0 4742900 0 0 59181 394 53204 500072;500073;500074;500075 396650;396651;396652 396650 3 VVVVQAISALCQK Unmodified 1413.8014 0.80137054 5267;4839 Q9UBF2;Q9Y678 COPG2;COPG1 Coatomer subunit gamma-2;Coatomer subunit gamma-1 no no 0 0 0 By MS/MS By matching By matching By matching 10 0 4 1 1 1 1 79.885 79.983 2 0.017648 92493 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 49.35 41.705 6238500 0 0 0 0 0 1528000 0 0 0 0 1864300 0 1078700 1767500 0 59182 4839;5267 53205 500076;500077;500078;500079 396653 396653 1 VVVVTAEK Unmodified 843.50657 0.50656873 4107 Q9BRF8 CPPED1 Serine/threonine-protein phosphatase CPPED1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 24.379 24.939 2 0.042547 25994 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 49.57 13.525 17819000 0 0 0 0 0 0 0 0 0 0 0 3808900 0 2679600 11330000 59183 4107 53206 500080;500081;500082 396654;396655 396655 2 VVVVTGANTGIGK Unmodified 1213.703 0.7030367 3486 Q8TC12 RDH11 Retinol dehydrogenase 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.956 47.122 2 0.038537 53223 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 46.406 27.626 92090000 0 0 0 5982600 8189400 5238500 6090300 7179600 4733300 8189900 8833100 14577000 7688500 7026500 8360700 59184 3486 53207 500083;500084;500085;500086;500087;500088;500089;500090;500091;500092;500093;500094 396656 396656 1 VVVVVPNEEDWK Unmodified 1411.7347 0.73473076 2645 Q1KMD3 HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.873 74.936 2 1.0889E-05 86368 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 111.65 101.7 341070000 0 0 0 7870600 16532000 41220000 10548000 14404000 28860000 43754000 38746000 46436000 27683000 29450000 35562000 59185 2645 53208 500095;500096;500097;500098;500099;500100;500101;500102;500103;500104;500105;500106 396657;396658;396659;396660;396661;396662;396663;396664;396665;396666;396667;396668 396658 12 VVVVVPNEEDWKK Unmodified 1539.8297 0.82969378 2645 Q1KMD3 HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.7 1.43 1 22 1 2 2 1 2 2 2 2 1 2 2 2 2 64.983 64.86 2;3 0.00020414 74028 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 75.088 70.366 502380000 0 7409100 0 23204000 33793000 23237000 30226000 31580000 22646000 49115000 47941000 74148000 46862000 48739000 63481000 59186 2645 53209 500107;500108;500109;500110;500111;500112;500113;500114;500115;500116;500117;500118;500119;500120;500121;500122;500123;500124;500125;500126;500127;500128;500129 396669;396670;396671;396672;396673;396674;396675;396676;396677;396678;396679;396680;396681;396682;396683;396684;396685;396686;396687;396688;396689;396690 396686 19 VVVYLQK Unmodified 847.51674 0.51673948 1722 P53634 CTSC Dipeptidyl peptidase 1;Dipeptidyl peptidase 1 exclusion domain chain;Dipeptidyl peptidase 1 heavy chain;Dipeptidyl peptidase 1 light chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.263 42.441 2 0.023434 47538 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 85.306 13.286 238110000 0 0 0 46421000 13487000 14465000 15464000 19824000 12225000 17284000 20297000 21433000 20132000 16209000 20868000 59187 1722 53210 500130;500131;500132;500133;500134;500135;500136;500137;500138;500139;500140;500141 396691;396692;396693;396694;396695;396696 396692 6 VVVYPSNQTLK Unmodified 1246.6921 0.69213767 4707 Q9NWX6 THG1L Probable tRNA(His) guanylyltransferase yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 47.29 47.761 2 0.0035257 52676 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.879 42.376 12586000 0 0 0 0 0 0 0 0 0 0 3418500 0 0 3016500 6150700 59188 4707 53211 500142;500143;500144 396697 396697 1 VVWVEESDK Unmodified 1089.5342 0.53424004 170 O00571 DDX3X ATP-dependent RNA helicase DDX3X yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44.974 43.867 2 0.0032531 50205 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 90.657 70.136 793050000 16700000 214870000 6516000 55889000 42274000 58115000 42549000 44106000 36736000 0 49590000 71016000 49223000 40818000 64654000 59189 170 53212 500145;500146;500147;500148;500149;500150;500151;500152;500153;500154;500155;500156;500157;500158;500159 396698;396699;396700;396701;396702;396703;396704;396705;396706;396707;396708;396709;396710;396711;396712;396713;396714 396713 17 VVWVEESDKR Unmodified 1245.6354 0.63535107 170 O00571 DDX3X ATP-dependent RNA helicase DDX3X yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 36.384 36.457 3 0.0097479 40907 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 34.755 27.21 19953000 0 0 0 5995700 0 0 2883500 0 2778400 0 0 0 4991200 3304800 0 59190 170 53213 500160;500161;500162;500163;500164 396715 396715 1 VVYASATGASEPR Unmodified 1306.6517 0.65172941 17 A3KN83 SBNO1 Protein strawberry notch homolog 1 no no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.968 31.158 2 5.899E-08 33675 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 121.83 110.68 126990000 0 0 0 6544900 6398700 8713300 8711300 6983300 6327300 13149000 13558000 18148000 10969000 11732000 15757000 59191 17 53214 500165;500166;500167;500168;500169;500170;500171;500172;500173;500174;500175;500176 396716;396717;396718;396719;396720;396721;396722;396723;396724 396723 8 VVYENAYGQFIGPHR Unmodified 1748.8635 0.86345352 2641 Q16881 TXNRD1 Thioredoxin reductase 1, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 67.549 67.727 3 9.2218E-24 76859 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 109.15 91.517 213680000 0 0 0 0 3270300 0 0 0 0 13584000 30496000 33224000 0 24673000 108440000 59192 2641 53215 500177;500178;500179;500180;500181;500182 396725;396726;396727;396728;396729;396730;396731;396732 396726 8 VVYFGDSMHSDIFPAR Oxidation (M) 1855.8563 0.85631924 2797 Q5TFE4 NT5DC1 5'-nucleotidase domain-containing protein 1 yes yes 0 1 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 74.358 74.554 3 0.00024218 85432 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.288 52.287 24395000 0 0 0 0 0 0 0 0 0 3303600 0 0 0 5672300 15419000 59193 2797 53216 500183;500184;500185 396733 396733 4429 1 VVYGDTDSVMCR Unmodified 1400.6064 0.60643548 1234 P28340 POLD1 DNA polymerase delta catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 46.295 46.477 2 0.00016643 51240 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 85.355 81.337 91541000 0 0 0 7319700 4973800 9100700 0 0 0 0 17049000 16489000 8645200 10117000 17847000 59194 1234 53217 500186;500187;500188;500189;500190;500191;500192;500193 396734;396735;396736;396737;396738;396739;396740;396741 396736 8 VVYGGGAAEISCALAVSQEADK Unmodified 2194.0576 0.057597819 1548 P48643 CCT5 T-complex protein 1 subunit epsilon yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 19 2 2 2 1 2 2 2 2 1 1 2 82.132 82.232 2;3 4.1957E-16 94913 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.102 67.749 92111000 0 0 0 0 3957900 7021800 3124300 2126300 3161100 13266000 12824000 10946000 1415500 7567800 26699000 59195 1548 53218 500194;500195;500196;500197;500198;500199;500200;500201;500202;500203;500204;500205;500206;500207;500208;500209;500210;500211;500212 396742;396743;396744;396745;396746;396747;396748;396749;396750;396751 396746 9 VVYIFGPPVK Unmodified 1117.6536 0.65356732 1612 P49915 GMPS GMP synthase [glutamine-hydrolyzing] yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.831 79.889 2 0.00202 91482 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 86.953 79.76 530640000 0 0 0 17523000 14694000 66450000 24181000 24844000 16643000 57349000 50160000 54122000 29312000 44072000 131290000 59196 1612 53219 500213;500214;500215;500216;500217;500218;500219;500220;500221;500222;500223;500224 396752;396753;396754;396755;396756;396757;396758;396759;396760;396761;396762 396759 3 VVYNVLSELEK Unmodified 1291.7024 0.702368 1161 P23497 SP100 Nuclear autoantigen Sp-100 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 82.563 82.728 2 0.013345 95269 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.342 44.14 31976000 0 0 0 0 0 0 1875900 3815900 1934300 4659200 3136900 0 0 5923300 10631000 59197 1161 53220 500225;500226;500227;500228;500229;500230;500231 396763 396763 1 VVYQPGYPK Unmodified 1049.5546 0.55458155 2947 Q6PGP7 TTC37 Tetratricopeptide repeat protein 37 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 38.723 38.852 2 0.011542 42595 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 62.659 37.764 48281000 0 0 0 2668900 2569900 5739000 2957200 3106800 2039100 5506500 5710300 8333700 5518100 4131600 0 59198 2947 53221 500232;500233;500234;500235;500236;500237;500238;500239;500240;500241;500242 396764;396765;396766;396767;396768;396769 396769 6 VVYSAFLMATPR Oxidation (M) 1369.7064 0.70640752 2481 Q15029 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 77.655 77.699 2 1.6207E-05 89335 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 101.38 97.494 110910000 0 0 0 5787500 4983800 9857600 7685100 5538400 7632700 11071000 0 17793000 10296000 9553700 20711000 59199 2481 53222 500243;500244;500245;500246;500247;500248;500249;500250;500251;500252;500253 396770;396771;396772;396773;396774;396775 396771 4092 6 VVYSGDTMPCEALVR Oxidation (M) 1711.7909 0.79094179 4086 Q9BQ52 ELAC2 Zinc phosphodiesterase ELAC protein 2 yes yes 0 1 0 By MS/MS 2 0 1 1 64.951 59.034 2 4.9811E-10 75558 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.35 102.38 18738000 0 18738000 0 0 0 0 0 0 0 0 0 0 0 0 0 59200 4086 53223 500254 396776 396776 5592 1 VVYSGDTMPCEALVRMGK Unmodified 2011.9529 0.95293851 4086 Q9BQ52 ELAC2 Zinc phosphodiesterase ELAC protein 2 yes yes 0 0 1 By MS/MS 2 0 1 1 81.21 73.079 3 0.0047882 95885 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.249 43.352 10745000 10745000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59201 4086 53224 500255 396777 396777 1 VVYTPESLYK Unmodified 1197.6281 0.62814043 2165 Q08AF3 SLFN5 Schlafen family member 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.138 61.24 2 0.0082748 69594 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 60.436 49.025 153370000 0 0 0 7383700 8887000 11136000 8646800 18797000 6604400 13218000 14743000 17870000 12364000 12801000 20916000 59202 2165 53225 500256;500257;500258;500259;500260;500261;500262;500263;500264;500265;500266;500267 396778;396779;396780;396781;396782;396783;396784;396785;396786;396787 396780 9 VVYVFSTEMANK Unmodified 1386.6853 0.68533773 165 O00512 BCL9 B-cell CLL/lymphoma 9 protein yes yes 0 0 0 By MS/MS 10 0 1 1 71.447 71.849 2 0.008028 82141 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.632 47.655 5087700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5087700 59203 165 53226 500268 396788 396788 1 VWAEYALK Unmodified 978.51747 0.51746776 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.095 61.197 2 0.0070301 68923 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 91.041 65.147 158060000 0 0 0 5017100 6352200 10902000 8172100 13658000 7382900 13360000 19321000 21509000 13361000 14609000 24418000 59204 2930 53227 500269;500270;500271;500272;500273;500274;500275;500276;500277;500278;500279;500280 396789;396790;396791;396792;396793;396794;396795;396796;396797;396798;396799;396800 396797 12 VWAHYEEQPVEEVMPVLEEK Unmodified 2440.1621 0.16206289 3039 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 88.137 83.474 3 1.6445E-07 105666 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 72.568 68.216 274970000 125780000 126940000 22244000 0 0 0 0 0 0 0 0 0 0 0 0 59205 3039 53228 500281;500282;500283;500284 396801;396802;396803;396804 396802 4 VWAHYEEQPVEEVMPVLEEK Oxidation (M) 2456.157 0.15697751 3039 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 0 1 0 By MS/MS 2 0 1 1 78.313 75.685 3 0.00018696 91924 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 49.592 45.564 37464000 0 0 37464000 0 0 0 0 0 0 0 0 0 0 0 0 59206 3039 53228 500285 396805 396805 4649 1 VWDAVSGDELMTLAHK Unmodified 1770.8611 0.86107026 5167 Q9Y3F4 STRAP Serine-threonine kinase receptor-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 4.43 3.54 4 1 2 1 3 1 1 1 84.841 81.549 3 5.2716E-39 102807 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 111.43 99.742 1135000000 60017000 982450000 58186000 0 0 0 0 0 0 0 0 0 0 2005400 32393000 59207 5167 53229 500286;500287;500288;500289;500290;500291;500292 396806;396807;396808;396809;396810 396806 5 VWDAVSGDELMTLAHK Oxidation (M) 1786.856 0.85598488 5167 Q9Y3F4 STRAP Serine-threonine kinase receptor-associated protein yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 7.12 3.72 2 1 5 2 1 1 1 1 1 1 77.155 75.893 3 0.00066427 86799 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 48.216 41.809 727010000 0 580150000 100530000 0 0 9398700 0 8059200 0 5819200 11254000 0 0 11807000 0 59208 5167 53229 500293;500294;500295;500296;500297;500298;500299;500300 396811;396812;396813;396814;396815 396815 6539 5 VWDISGLR Unmodified 944.50797 0.50796571 1721 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 0 0 0 By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.403 72.474 2 0.0065186 83312 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 100.19 72.081 173400000 0 0 0 6352400 9199300 16047000 10745000 17083000 8177900 17642000 14432000 17157000 12399000 13638000 30526000 59209 1721 53230 500301;500302;500303;500304;500305;500306;500307;500308;500309;500310;500311;500312 396816;396817;396818;396819;396820;396821;396822 396822 6 VWDLFPEADK Unmodified 1218.5921 0.59208927 4033 Q99613;B5ME19 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 84.765 83.354 2 0.012134 105424 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.948 53.872 454800000 19511000 250930000 5334500 73938000 2497500 6586900 5556000 0 0 0 11727000 15453000 12113000 13746000 37405000 59210 4033 53231 500313;500314;500315;500316;500317;500318;500319;500320;500321;500322;500323;500324;500325 396823;396824;396825;396826 396825 4 VWDLSDIDK Unmodified 1089.5342 0.53424004 4836 Q9UBC2 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 74.958 75.062 2 0.018565 85719 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 54.722 41.685 37220000 0 0 0 0 1961700 2495000 1565400 0 2725500 4551300 3800300 6183500 3140000 3531200 7266300 59211 4836 53232 500326;500327;500328;500329;500330;500331;500332;500333;500334;500335 396827;396828;396829;396830;396831 396830 5 VWDPDNPLTDR Unmodified 1326.6204 0.62042929 583 O94776 MTA2 Metastasis-associated protein MTA2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.233 67.315 2 1.9741E-05 76319 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 132.01 123.79 187730000 0 0 0 9381700 9296800 15958000 9620600 13204000 7725100 17921000 17497000 21605000 15993000 19092000 30435000 59212 583 53233 500336;500337;500338;500339;500340;500341;500342;500343;500344;500345;500346;500347 396832;396833;396834;396835;396836;396837;396838;396839;396840;396841;396842 396838 11 VWDPNSPLTDR Unmodified 1298.6255 0.62551466 4140 Q9BTC8 MTA3 Metastasis-associated protein MTA3 yes yes 0 0 0 By MS/MS 10 0 1 1 60.951 60.433 2 0.018117 69280 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 43.651 26.183 3513300 0 0 0 0 3513300 0 0 0 0 0 0 0 0 0 0 59213 4140 53234 500348 396843 396843 1 VWDVGQPGAK Unmodified 1055.54 0.53999412 2103 Q04725 TLE2 Transducin-like enhancer protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 47.614 42.051 2 0.019257 54588 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.246 47.211 19526000 0 19526000 0 0 0 0 0 0 0 0 0 0 0 0 0 59214 2103 53235 500349 396844 396844 1 VWDVGTR Unmodified 831.4239 0.42390173 4304 Q9GZS3 WDR61 WD repeat-containing protein 61;WD repeat-containing protein 61, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.554 36.736 2 0.024481 40513 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 97.071 52.46 268990000 0 0 0 8295000 11191000 13735000 11326000 12562000 9374400 19808000 24442000 33515000 33680000 34347000 56711000 59215 4304 53236 500350;500351;500352;500353;500354;500355;500356;500357;500358;500359;500360;500361 396845;396846;396847;396848 396845 3 VWDVIGR Unmodified 843.46029 0.46028724 194 O14618 CCS Copper chaperone for superoxide dismutase yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 59.997 60.193 2 0.038679 67746 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 69.383 48.828 38528000 0 0 0 0 1046300 0 1999400 2728300 2569100 3170800 5042100 5373500 3461600 4320900 8816200 59216 194 53237 500362;500363;500364;500365;500366;500367;500368;500369;500370;500371 396849 396849 1 VWDVRPFAPK Unmodified 1213.6608 0.66077796 3798 Q96DI7 SNRNP40 U5 small nuclear ribonucleoprotein 40 kDa protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 66.881 67.018 3 0.027017 75956 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 33.229 27.386 56483000 0 0 0 2361400 0 3585000 2483900 3768900 3026700 3079700 4719000 6779400 5401900 4537200 16740000 59217 3798 53238 500372;500373;500374;500375;500376;500377;500378;500379;500380;500381;500382 396850 396850 1 VWDYETGDFER Unmodified 1415.5994 0.59935949 1471 P43034 PAFAH1B1 Platelet-activating factor acetylhydrolase IB subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 65.968 66.128 2 0.0010688 74905 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 75.294 65.861 40424000 0 0 0 2681400 0 0 0 0 0 0 6404700 5991600 0 3984900 21361000 59218 1471 53239 500383;500384;500385;500386;500387 396851;396852;396853;396854;396855 396853 5 VWDYETGDFERTLK Unmodified 1757.8261 0.82606496 1471 P43034 PAFAH1B1 Platelet-activating factor acetylhydrolase IB subunit alpha yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 78.241 73.031 3 2.3992E-14 89648 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 95.651 77.548 141560000 48183000 66007000 27372000 0 0 0 0 0 0 0 0 0 0 0 0 59219 1471 53240 500388;500389;500390;500391 396856;396857;396858;396859;396860 396860 5 VWEGFIK Unmodified 877.46979 0.46978929 3663 Q92797 SYMPK Symplekin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 69.1 68.529 2 0.035362 88470 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.359 43.673 90261000 0 28005000 5750400 2374300 0 5426800 5050400 4849600 5439900 5103200 7181700 0 7093300 6271000 7715500 59220 3663 53241 500392;500393;500394;500395;500396;500397;500398;500399;500400;500401;500402;500403 396861;396862 396861 2 VWEQIDQMK Unmodified 1175.5645 0.56449431 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 58.909 56.234 2 0.0010762 72221 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.28 119.59 177700000 8374300 129420000 2924700 7775700 5393300 0 0 0 0 0 0 0 10522000 13288000 0 59221 2392 53242 500404;500405;500406;500407;500408;500409;500410;500411;500412;500413;500414 396863;396864;396865;396866;396867;396868;396869;396870;396871;396872;396873;396874 396866 12 VWEQIDQMK Oxidation (M) 1191.5594 0.55940893 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 40.518 40.032 2 0.0020779 44718 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 92.439 67.517 199200000 0 118900000 0 9667200 5571400 8529700 0 0 6983800 13457000 10260000 16907000 0 8928500 0 59222 2392 53242 500415;500416;500417;500418;500419;500420;500421;500422;500423;500424 396875;396876;396877;396878;396879;396880;396881;396882;396883;396884 396875 3927 9 VWEVAAPYIEK Unmodified 1303.6812 0.68123863 1456 P42357 HAL Histidine ammonia-lyase yes yes 0 0 0 By MS/MS 10 0 1 1 78.251 77.778 2 0.020911 90289 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 57.598 38.327 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59223 1456 53243 500425 396885 396885 1 VWGNVGTVEWADPIEDPDPEVMAK Unmodified 2653.237 0.23701875 407 O60506 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 94.394 89.712 3 0.00017132 112236 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 51.577 45.318 69265000 13538000 51524000 4203200 0 0 0 0 0 0 0 0 0 0 0 0 59224 407 53244 500426;500427;500428;500429 396886;396887;396888;396889 396886 4 VWLDPNETNEIANANSR Unmodified 1941.9181 0.91806787 2015 P84098 RPL19 60S ribosomal protein L19 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.68 1.57 1 24 1 2 2 2 2 2 2 2 2 2 2 2 2 73.219 73.086 2;3 2.2489E-38 83745 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 168.59 158.54 1114500000 0 15238000 0 53446000 60084000 95830000 45693000 59108000 67871000 114680000 105010000 156280000 85411000 102290000 153560000 59225 2015 53245 500430;500431;500432;500433;500434;500435;500436;500437;500438;500439;500440;500441;500442;500443;500444;500445;500446;500447;500448;500449;500450;500451;500452;500453;500454 396890;396891;396892;396893;396894;396895;396896;396897;396898;396899;396900;396901;396902;396903;396904;396905;396906;396907;396908;396909;396910;396911;396912 396898 13 VWLSQEVDK Unmodified 1102.5659 0.56587452 3964 Q96R06 SPAG5 Sperm-associated antigen 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 53.822 53.036 2 0.016766 61360 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 56.258 38.223 221750000 0 78063000 2431900 6452600 4674300 0 8339100 9502200 0 25871000 0 20714000 24948000 13064000 27685000 59226 3964 53246 500455;500456;500457;500458;500459;500460;500461;500462;500463;500464;500465 396913;396914;396915;396916;396917;396918;396919 396918 6 VWNLANCK Unmodified 1003.4909 0.49093544 1950 P63244 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 52.053 46.391 2 0.0095157 62976 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 114.02 82.72 844880000 514590000 297460000 32839000 0 0 0 0 0 0 0 0 0 0 0 0 59227 1950 53247 500466;500467;500468;500469 396920;396921;396922 396921 3 VWPPGAQEPCTVRPAQVEPLLR Unmodified 2499.3056 0.30564786 2991 Q6XQN6 NAPRT Nicotinate phosphoribosyltransferase yes yes 0 0 1 By MS/MS 10 0 1 1 80.002 80.232 3 0.00046903 92296 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.552 25.586 14452000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14452000 59228 2991 53248 500470 396923 396923 1 VWQLGSSSPNFTLEGHEK Unmodified 2014.9749 0.97485447 1358 P35606 COPB2 Coatomer subunit beta' yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77.166 76.139 3 4.682E-08 87455 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.334 50.413 437640000 273940000 43257000 4177200 1717900 0 7661600 2765900 10539000 9593300 9464500 9120000 13177000 7686900 8068900 36471000 59229 1358 53249 500471;500472;500473;500474;500475;500476;500477;500478;500479;500480;500481;500482;500483;500484 396924;396925;396926;396927;396928;396929;396930;396931;396932;396933;396934;396935;396936;396937 396928 14 VWQVTIGTR Unmodified 1058.5873 0.58727866 1950 P63244 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 0 0 0 By MS/MS 10 0 1 1 64.19 64.753 2 0.01448 73333 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.23 42.076 18110000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18110000 59230 1950 53250 500485 396938 396938 1 VWREQNEK Unmodified 1087.5411 0.54105675 3994 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a yes yes 0 0 1 By MS/MS 2 0 1 1 11.382 7.5086 2 0.034682 11975 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 125.47 90.662 34660000 34660000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59231 3994 53251 500486 396939 396939 0 VWSEELFK Unmodified 1036.5229 0.52294707 2067 Q01970 PLCB3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 78.179 74.466 2 0.02908 93154 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.058 54.927 35461000 0 29346000 6115400 0 0 0 0 0 0 0 0 0 0 0 0 59232 2067 53252 500487;500488 396940 396940 1 VWSEVNQAVLDYENRESTPK Unmodified 2363.1394 0.13935361 4702 Q9NWU2 GID8 Glucose-induced degradation protein 8 homolog yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 81.313 77.674 3 8.8256E-05 96659 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 57.989 50.713 33271000 0 29325000 3946200 0 0 0 0 0 0 0 0 0 0 0 0 59233 4702 53253 500489;500490 396941 396941 1 VWSGVPAEMPGTK Unmodified 1357.67 0.67002202 3646 Q92636 NSMAF Protein FAN yes yes 0 0 0 By MS/MS 2 0 1 1 72.898 67.353 2 8.0557E-06 84980 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.3 84.27 78444000 0 78444000 0 0 0 0 0 0 0 0 0 0 0 0 0 59234 3646 53254 500491 396942 396942 1 VWSGVPAEMPGTK Oxidation (M) 1373.6649 0.66493664 3646 Q92636 NSMAF Protein FAN yes yes 0 1 0 By MS/MS 2 0 1 1 53.302 47.51 2 0.031597 61632 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 51.436 19.218 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59235 3646 53254 500492 396943 396943 1 VWSPLVTEEGK Unmodified 1243.6449 0.64485312 119 O00151 PDLIM1 PDZ and LIM domain protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 68.938 67.681 2 0.00043594 77591 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 85.377 74.548 2306000000 45775000 1963500000 30423000 8759700 5763300 9041700 13844000 11096000 7924200 14700000 31863000 38838000 10744000 29673000 84098000 59236 119 53255 500493;500494;500495;500496;500497;500498;500499;500500;500501;500502;500503;500504;500505;500506;500507;500508 396944;396945;396946;396947;396948;396949;396950;396951;396952;396953;396954;396955;396956;396957;396958;396959 396944 14 VWTSQLK Unmodified 860.4756 0.47560295 433;2640 O60825;Q16875 PFKFB2;PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase;6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase no no 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38.369 37.471 2 0.022033 51535 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 108.24 79.984 865310000 141250000 91069000 10227000 40599000 46676000 53620000 49564000 45601000 43014000 55436000 49338000 78512000 51233000 43726000 65440000 59237 433;2640 53256 500509;500510;500511;500512;500513;500514;500515;500516;500517;500518;500519;500520;500521;500522;500523 396960;396961;396962;396963 396962 4 VWVQAFK Unmodified 876.48577 0.48577371 943 P11279 LAMP1 Lysosome-associated membrane glycoprotein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 61.488 60.45 2 0.040642 82523 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.377 62.816 130350000 28029000 7676900 0 19332000 4608600 5883900 5625900 10340000 4382000 9511100 7751900 11255000 8153000 7804000 0 59238 943 53257 500524;500525;500526;500527;500528;500529;500530;500531;500532;500533;500534;500535;500536 396964;396965 396964 2 VWVQSLEK Unmodified 987.53893 0.53893149 1019 P15336 ATF2 Cyclic AMP-dependent transcription factor ATF-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 59.202 53.218 2 0.01951 68617 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.794 72.012 50753000 14511000 32049000 4193700 0 0 0 0 0 0 0 0 0 0 0 0 59239 1019 53258 500537;500538;500539 396966 396966 1 VWVVATK Unmodified 801.47487 0.47487467 1471 P43034 PAFAH1B1 Platelet-activating factor acetylhydrolase IB subunit alpha yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 44.374 44.467 2 0.039143 48542 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.176 46.246 29217000 0 0 0 5284200 0 0 0 0 0 0 0 0 0 0 23932000 59240 1471 53259 500540;500541 396967 396967 1 VWYVSNIDGTHIAK Unmodified 1601.8202 0.82019173 829 P06744 GPI Glucose-6-phosphate isomerase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 2 2 1 2 69.399 69.727 2;3 0.00021521 79343 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 77.894 58.795 439910000 0 0 0 0 0 0 0 3863700 0 0 48289000 40750000 0 36167000 310840000 59241 829 53260 500542;500543;500544;500545;500546;500547;500548;500549 396968;396969;396970;396971;396972;396973 396971 6 VYACEVTHQGLSSPVTK Unmodified 1874.9196 0.91964777 747 P01834 IGKC Ig kappa chain C region yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 50.048 48.891 3 7.269E-32 55292 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 117.4 104.56 248030000 9566700 0 4035700 153900000 9811500 0 15013000 8865100 0 12181000 0 13789000 12513000 8358600 0 59242 747 53261 500550;500551;500552;500553;500554;500555;500556;500557;500558;500559 396974;396975;396976;396977;396978;396979;396980;396981;396982;396983;396984 396976 11 VYAENAIR Unmodified 934.48723 0.48723027 4527 Q9HD42 CHMP1A Charged multivesicular body protein 1a yes yes 0 0 0 By MS/MS By matching By MS/MS By matching 10 0 4 1 1 1 1 27.864 28.019 2 0.032055 30107 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 54.549 17.529 18654000 0 0 0 4367700 0 0 3643800 0 0 4779200 0 0 0 0 5863600 59243 4527 53262 500560;500561;500562;500563 396985 396985 1 VYAEVNSLR Unmodified 1049.5506 0.55055881 1094 P19784 CSNK2A2 Casein kinase II subunit alpha' yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 41.739 41.802 2 0.010476 46606 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 64.265 33.035 97538000 0 0 0 5770700 4430900 5833900 5790200 17289000 6364400 9789000 19634000 0 14768000 7868400 0 59244 1094 53263 500564;500565;500566;500567;500568;500569;500570;500571;500572;500573;500574 396986;396987;396988;396989;396990;396991 396987 6 VYALPEDLVEVK Unmodified 1373.7442 0.74423282 986 P13797 PLS3 Plastin-3 yes yes 0 0 0 By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 82.603 82.65 2 0.0096807 94864 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 54.539 38.206 38068000 0 0 0 798430 1239800 8648200 1889600 2396800 3009900 4589700 5671000 4280000 0 5544400 0 59245 986 53264 500575;500576;500577;500578;500579;500580;500581;500582;500583;500584 396992;396993 396993 2 VYALPEDLVEVKPK Unmodified 1598.892 0.89195969 986 P13797 PLS3 Plastin-3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.018 78.077 3 1.1338E-12 89692 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.457 50.108 614730000 0 0 0 21565000 17192000 54698000 33165000 32257000 24855000 57066000 74593000 71557000 35690000 48843000 143250000 59246 986 53265 500585;500586;500587;500588;500589;500590;500591;500592;500593;500594;500595;500596 396994;396995;396996;396997;396998;396999;397000;397001;397002;397003;397004;397005 396997 12 VYALPEDLVEVNPK Unmodified 1584.8399 0.83992412 985 P13796 LCP1 Plastin-2 yes yes 0 0 0 By MS/MS 10 0 1 1 83.22 82.826 2 0.010639 96334 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 44.318 37.934 2583200 0 0 0 2583200 0 0 0 0 0 0 0 0 0 0 0 59247 985 53266 500597 397006 397006 1 VYASGGTEGFPLSR Unmodified 1439.7045 0.70449327 4194 Q9BVN2 RUSC1 RUN and SH3 domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.656 61.756 2 7.3715E-12 70323 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 102.4 86.771 73966000 0 0 0 3162300 3996000 4339100 4771000 5799900 3600500 6286900 7759100 11594000 7260100 5879600 9516900 59248 4194 53267 500598;500599;500600;500601;500602;500603;500604;500605;500606;500607;500608;500609 397007;397008;397009;397010;397011;397012;397013;397014;397015;397016;397017;397018 397016 12 VYATILNAGTNTDGFK Unmodified 1683.8468 0.84680041 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75 75.059 2 1.2506E-35 86549 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 186.02 176.01 204090000 0 0 0 6514500 7396100 23229000 12358000 10457000 7917400 24463000 20366000 29313000 10738000 14652000 36682000 59249 1565 53268 500610;500611;500612;500613;500614;500615;500616;500617;500618;500619;500620;500621 397019;397020;397021;397022;397023;397024;397025;397026;397027;397028;397029;397030;397031 397024 13 VYAVATSTNTPCAR Unmodified 1509.7246 0.72457678 2179 Q10570 CPSF1 Cleavage and polyadenylation specificity factor subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 2 1 1 1 1 2 38.313 38.523 2 4.1523E-08 42615 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 123.75 99.367 26595000 0 0 0 0 2284400 0 0 2451900 2307100 4293200 5730900 0 0 2908100 6619800 59250 2179 53269 500622;500623;500624;500625;500626;500627;500628;500629;500630 397032;397033;397034;397035;397036;397037;397038 397035 7 VYCENQPMLPIGLSDIPGEAMVK Oxidation (M) 2576.2325 0.23246742 1956 P67870 CSNK2B Casein kinase II subunit beta yes yes 0 1 0 By MS/MS 2 0 1 1 95.451 90.587 3 0.00092109 112378 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 41.911 34.378 25017000 0 25017000 0 0 0 0 0 0 0 0 0 0 0 0 0 59251 1956 53270 500631 397039 397039 3142 1 VYDEEVEEPVLK Unmodified 1447.7082 0.70824124 2840;5195 Q641Q2;Q9Y4E1 FAM21A;FAM21C WASH complex subunit FAM21A;WASH complex subunit FAM21C no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 59.183 59.366 2 2.6826E-05 67471 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 99.815 88.664 100540000 0 0 0 0 4602700 7516200 6195100 0 5719900 9799600 13275000 13795000 9198000 8789600 21645000 59252 2840;5195 53271 500632;500633;500634;500635;500636;500637;500638;500639;500640;500641 397040;397041;397042;397043;397044;397045;397046;397047;397048;397049 397042 9 VYDGREILTCGR Unmodified 1437.7034 0.70344741 2514 Q15291 RBBP5 Retinoblastoma-binding protein 5 yes yes 0 0 1 By MS/MS By matching By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 46.514 46.69 3 0.030272 52561 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 33.782 18.395 18438000 0 0 0 2683700 0 0 0 0 1855800 2177400 0 3972900 4449600 3298600 0 59253 2514 53272 500642;500643;500644;500645;500646;500647 397050 397050 1 VYDPVSEYK Unmodified 1098.5233 0.523341 2326 Q13613 MTMR1 Myotubularin-related protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.64 2.9 1 1 9 2 1 1 1 1 1 1 1 1 1 48.089 47.316 2 0.0051384 53477 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 82.426 61.727 144300000 0 83063000 0 0 4183300 6648300 4868500 0 3781800 7396500 10815000 8172200 3803400 0 11563000 59254 2326 53273 500648;500649;500650;500651;500652;500653;500654;500655;500656;500657;500658 397051;397052;397053;397054;397055;397056;397057;397058;397059 397051 9 VYDQVVEDLNSR Unmodified 1435.6943 0.69432251 4539 Q9NP77 SSU72 RNA polymerase II subunit A C-terminal domain phosphatase SSU72 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 4 2 1 1 61.265 61.684 2 1.7947E-05 69641 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 105.52 88.609 35067000 0 0 0 0 0 0 0 0 0 0 0 12290000 0 4757000 18020000 59255 4539 53274 500659;500660;500661;500662 397060;397061 397060 2 VYEANVEK Unmodified 950.47091 0.4709115 2491 Q15057 ACAP2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 17.72 17.955 2 0.013529 18435 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 72.138 45.001 30325000 0 0 0 2447400 0 3883600 2522300 0 0 4113900 3274000 4386100 0 3156900 6541000 59256 2491 53275 500663;500664;500665;500666;500667;500668;500669;500670 397062;397063;397064;397065;397066 397063 5 VYEAVELLK Unmodified 1062.5961 0.59611202 3518 Q8TEQ6 GEMIN5 Gem-associated protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 72.46 72.258 2 0.0051747 82255 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.296 59.336 119200000 0 12932000 0 6643200 6472700 9457600 8218600 9355500 5016400 11257000 9065600 9518000 8307100 8305800 14650000 59257 3518 53276 500671;500672;500673;500674;500675;500676;500677;500678;500679;500680;500681;500682;500683 397067;397068;397069;397070;397071;397072;397073;397074;397075;397076;397077;397078;397079 397070 13 VYEDSGIPLPAESPK Unmodified 1600.7985 0.79845323 3263 Q8IXM2 BAP18 Chromatin complexes subunit BAP18 yes yes 0 0 0 By MS/MS 2 0 1 1 73.767 68.512 2 0.00051993 86113 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.326 54.333 32195000 0 32195000 0 0 0 0 0 0 0 0 0 0 0 0 0 59258 3263 53277 500684 397080 397080 1 VYEDWDCFK Unmodified 1260.5121 0.51212439 4143 Q9BTE3 MCMBP Mini-chromosome maintenance complex-binding protein yes yes 0 0 0 By matching By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 67.085 67.336 2 0.0083679 77167 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 69.825 60.237 9523000 0 0 0 0 0 0 1047200 0 0 0 2782500 3392300 2301100 0 0 59259 4143 53278 500685;500686;500687;500688 397081 397081 1 VYEELRATGAAAAEAK Unmodified 1648.842 0.84204938 3421 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.29 0.452 5 2 2 3 2 49.436 44.085 2;3 0.00034629 57537 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.412 49.013 189590000 20927000 113360000 55312000 0 0 0 0 0 0 0 0 0 0 0 0 59260 3421 53279 500689;500690;500691;500692;500693;500694;500695 397082;397083;397084;397085;397086;397087;397088;397089 397082 6 VYEEVLSVTPNDGFAK Unmodified 1766.8727 0.87268081 2191 Q12797 ASPH Aspartyl/asparaginyl beta-hydroxylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 77.238 77.328 2 2.1624E-05 89702 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 78.096 71.993 28645000 0 0 0 0 5225300 0 0 3941100 3689300 4073800 4501600 7213900 0 0 0 59261 2191 53280 500696;500697;500698;500699;500700;500701;500702;500703 397090;397091;397092;397093;397094;397095;397096 397095 7 VYEGERPLTK Unmodified 1190.6295 0.62953741 932 P11021 HSPA5 78 kDa glucose-regulated protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.88 3.54 1 7 1 25 4 3 2 2 2 2 2 2 2 2 2 2 2 2 3 25.157 24.604 2;3 1.4883E-06 30073 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 153.05 73.577 14331000000 1330200000 2045400000 2850200000 523890000 334160000 525170000 532560000 457600000 427490000 683010000 887200000 1168500000 683710000 726610000 1155500000 59262 932 53281 500704;500705;500706;500707;500708;500709;500710;500711;500712;500713;500714;500715;500716;500717;500718;500719;500720;500721;500722;500723;500724;500725;500726;500727;500728;500729;500730;500731;500732;500733;500734;500735;500736;500737 397097;397098;397099;397100;397101;397102;397103;397104;397105;397106;397107;397108;397109;397110;397111;397112;397113;397114;397115;397116;397117;397118;397119;397120;397121;397122;397123 397103 14 VYEIQDIYENSWTK Unmodified 1786.8414 0.84138068 5084 Q9Y262 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.44 3.98 4 5 1 2 1 1 1 1 1 1 83.402 81.253 2 1.1532E-23 101248 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.56 109.19 217850000 5546700 185920000 3048900 0 0 2432900 0 2079200 0 2709900 2460400 0 0 0 13652000 59263 5084 53282 500738;500739;500740;500741;500742;500743;500744;500745;500746 397124;397125;397126;397127;397128;397129;397130;397131;397132 397127 9 VYELGNEPERK Unmodified 1332.6674 0.66737948 3444 Q8NFD5 ARID1B AT-rich interactive domain-containing protein 1B yes yes 0 0 1 By matching By MS/MS 2 0 2 1 1 33.161 29.203 3 0.03609 37108 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 37.681 29.376 27524000 0 19472000 8052000 0 0 0 0 0 0 0 0 0 0 0 0 59264 3444 53283 500747;500748 397133 397133 1 VYELLGGEEDIVSPTK Unmodified 1747.888 0.88799652 2024 P98174 FGD1 FYVE, RhoGEF and PH domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 80.542 79.753 2 7.5653E-05 98340 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.76 92.647 99572000 0 74660000 0 1817700 2833100 3805600 0 2648900 1897200 0 4120200 5503400 2286100 0 0 59265 2024 53284 500749;500750;500751;500752;500753;500754;500755;500756;500757;500758 397134;397135;397136;397137;397138;397139 397135 6 VYELQASR Unmodified 964.49779 0.49779495 5084 Q9Y262 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 30.816 30.992 2 0.0067966 33636 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 96.492 47.988 262030000 0 0 0 12974000 15725000 23939000 20738000 12396000 14719000 19979000 30555000 40376000 0 24827000 45803000 59266 5084 53285 500759;500760;500761;500762;500763;500764;500765;500766;500767;500768;500769 397140;397141;397142;397143;397144;397145;397146;397147;397148;397149 397143 9 VYELQASRVSSDVIDQK Unmodified 1935.9902 0.99017018 5084 Q9Y262 EIF3L Eukaryotic translation initiation factor 3 subunit L yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.33 0.471 2 1 1 1 1 67.705 62.131 3 2.5582E-09 82405 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.252 63.088 161220000 24859000 21989000 114370000 0 0 0 0 0 0 0 0 0 0 0 0 59267 5084 53286 500770;500771;500772 397150;397151;397152;397153 397151 4 VYENDDQLLWDPEYLPEDK Unmodified 2380.0747 0.074687671 3303 Q8N108 MIER1 Mesoderm induction early response protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 91.835 86.924 2 4.944E-18 107984 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 148.48 138 23477000 0 23477000 0 0 0 0 0 0 0 0 0 0 0 0 0 59268 3303 53287 500773 397154 397154 1 VYENVTGLVK Unmodified 1120.6128 0.61282471 2114 Q05397 PTK2 Focal adhesion kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 58.113 57.454 2 0.0016854 65147 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 89.355 52.959 455180000 0 291210000 0 8504800 7844700 16475000 15412000 11532000 7337100 15711000 20523000 15703000 13547000 12390000 18994000 59269 2114 53288 500774;500775;500776;500777;500778;500779;500780;500781;500782;500783;500784;500785;500786;500787 397155;397156;397157;397158;397159;397160;397161;397162;397163;397164;397165;397166;397167;397168;397169 397162 14 VYENYPTYDLTER Unmodified 1661.7573 0.7573167 1365 P35659 DEK Protein DEK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.378 64.468 2 2.0107E-09 74011 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 115.57 99.944 218330000 0 0 0 10873000 16208000 20011000 13062000 13889000 15222000 22650000 23826000 25714000 13093000 14965000 28817000 59270 1365 53289 500788;500789;500790;500791;500792;500793;500794;500795;500796;500797;500798;500799 397170;397171;397172;397173;397174;397175;397176;397177;397178;397179;397180;397181;397182;397183 397183 14 VYENYPTYDLTERK Unmodified 1789.8523 0.85227972 1365 P35659 DEK Protein DEK yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.39 3.7 5 1 12 1 3 2 1 1 1 1 1 1 1 1 1 1 1 1 57.336 55.619 2;3 7.6837E-19 72035 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 150.06 136.66 1919700000 37707000 546930000 93991000 63466000 71312000 87897000 78500000 81395000 78894000 122850000 143490000 151160000 93745000 83108000 185240000 59271 1365 53290 500800;500801;500802;500803;500804;500805;500806;500807;500808;500809;500810;500811;500812;500813;500814;500815;500816;500817 397184;397185;397186;397187;397188;397189;397190;397191;397192;397193;397194;397195;397196;397197;397198;397199 397187 8 VYETDNNIVVYK Unmodified 1455.7246 0.72456001 2095 Q03393 PTS 6-pyruvoyl tetrahydrobiopterin synthase yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 58.722 53.383 2 0.00012309 68357 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.84 85.754 125380000 0 125380000 0 0 0 0 0 0 0 0 0 0 0 0 0 59272 2095 53291 500818;500819 397200 397200 1 VYFDLRIGDEDVGRVIFGLFGK Unmodified 2514.3271 0.3270948 1153 P23284 PPIB Peptidyl-prolyl cis-trans isomerase B yes yes 0 0 2 By MS/MS By matching 2 0 2 1 1 101.9 98.345 4 0.0026062 121409 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 36.805 29.271 8973100 0 8485000 488060 0 0 0 0 0 0 0 0 0 0 0 0 59273 1153 53292 500820;500821 397201 397201 1 VYFDTENK Unmodified 1014.4658 0.46582612 3972 Q96RP9 GFM1 Elongation factor G, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 36.037 31.19 2 0.0025347 40814 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.52 99.97 88837000 0 88837000 0 0 0 0 0 0 0 0 0 0 0 0 0 59274 3972 53293 500822 397202 397202 1 VYFHTDAAQAVGK Unmodified 1405.699 0.69901396 5271 Q9Y697 NFS1 Cysteine desulfurase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 2 0 4 2 2 50.152 44.204 2;3 2.3281E-08 61103 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.561 65.737 124600000 92456000 0 32139000 0 0 0 0 0 0 0 0 0 0 0 0 59275 5271 53294 500823;500824;500825;500826 397203;397204;397205;397206 397203 3 VYFPYLLISK Unmodified 1241.706 0.70599682 1234 P28340 POLD1 DNA polymerase delta catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 92.763 92.076 2 0.010122 107299 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.563 51.081 38630000 7111900 0 0 0 0 3422800 1145100 3203400 2464400 4889000 1529700 2743400 0 1892300 10228000 59276 1234 53295 500827;500828;500829;500830;500831;500832;500833;500834;500835;500836 397207;397208;397209;397210;397211 397208 5 VYFQSPPGAAGEGPGGADDEGPVR Unmodified 2329.0611 0.061103292 3774 Q96C90 PPP1R14B Protein phosphatase 1 regulatory subunit 14B yes yes 0 0 0 By MS/MS 10 0 1 1 66.034 66.571 3 1.3387E-08 75713 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.72 51.853 9182700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9182700 59277 3774 53296 500837 397212 397212 1 VYFQSPPGAAGEGPGGADDEGPVRR Unmodified 2485.1622 0.16221432 3774 Q96C90 PPP1R14B Protein phosphatase 1 regulatory subunit 14B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 59.152 59.334 3 4.678E-93 66946 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 117.64 112.02 177000000 0 0 0 0 5148100 6030800 7815600 7315200 6710500 9919400 24033000 27398000 6328800 19554000 56749000 59278 3774 53297 500838;500839;500840;500841;500842;500843;500844;500845;500846;500847;500848 397213;397214;397215;397216;397217;397218;397219;397220;397221;397222;397223;397224;397225;397226;397227;397228;397229 397218 17 VYGAAIQFYEPYSR Unmodified 1662.8042 0.80420731 2830 Q5VZ89 DENND4C DENN domain-containing protein 4C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 79.201 79.352 2 6.3855E-14 91759 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 141.88 125.25 37327000 0 0 0 0 0 0 4442100 0 6968200 13050000 7282900 0 0 5583700 0 59279 2830 53298 500849;500850;500851;500852;500853 397230;397231;397232;397233;397234 397230 5 VYGGDDRIGALTHK Unmodified 1500.7685 0.76849051 2635 Q16775 HAGH Hydroxyacylglutathione hydrolase, mitochondrial yes yes 0 0 1 By MS/MS 2 0 1 1 47.871 40.157 3 0.0024732 55542 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.167 43.031 63087000 63087000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59280 2635 53299 500854 397235;397236 397236 2 VYGPGVAK Unmodified 789.43849 0.43848916 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.12 2.32 1 7 1 1 1 1 1 1 1 1 21.263 20.932 2 0.015305 21854 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 69.093 42.614 582460000 0 116500000 0 39291000 30309000 0 48451000 0 33459000 0 0 109850000 61001000 0 143600000 59281 1124 53300 500855;500856;500857;500858;500859;500860;500861;500862 397237;397238;397239;397240;397241;397242 397242 6 VYGVESDLSEVAR Unmodified 1422.6991 0.69907354 1717 P53602 MVD Diphosphomevalonate decarboxylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.35 67.432 2 0.00072543 77120 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 71.555 59.319 134780000 0 0 0 4732000 5991200 8739800 13650000 19338000 11987000 14556000 13424000 20105000 2823700 4431400 14999000 59282 1717 53301 500863;500864;500865;500866;500867;500868;500869;500870;500871;500872;500873;500874 397243;397244;397245;397246;397247;397248;397249;397250;397251;397252;397253;397254 397251 12 VYGYVTNSK Unmodified 1029.5131 0.51311067 4986 Q9UL33 TRAPPC2L Trafficking protein particle complex subunit 2-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 7.7 3.52 2 1 7 1 2 1 1 1 1 1 1 1 27.634 26.415 2 0.013227 27528 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.118 41.388 196870000 22220000 146680000 0 0 0 3456900 0 2617900 1743200 4981500 3419200 5818300 0 0 5929000 59283 4986 53302 500875;500876;500877;500878;500879;500880;500881;500882;500883;500884 397255;397256;397257;397258;397259;397260;397261 397257 7 VYHQQYQDK Unmodified 1207.5622 0.56218613 157 O00459 PIK3R2 Phosphatidylinositol 3-kinase regulatory subunit beta yes yes 0 0 0 By MS/MS By matching By matching 2 0 3 1 1 1 9.0786 5.993 2 2.9094E-06 10240 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 175.91 144.6 28329000 16598000 6834600 4896900 0 0 0 0 0 0 0 0 0 0 0 0 59284 157 53303 500885;500886;500887 397262 397262 1 VYIASSSGSTAIK Unmodified 1282.6769 0.67688153 486 O75368 SH3BGRL SH3 domain-binding glutamic acid-rich-like protein yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 39.596 39.829 2 0.0013664 43073 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.624 47.422 9130100 0 0 0 2463700 0 0 0 0 0 0 2581200 0 0 0 4085300 59285 486 53304 500888;500889;500890 397263;397264 397263 2 VYIERDEVK Unmodified 1149.603 0.60298831 202 O14686 KMT2D Histone-lysine N-methyltransferase 2D yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 26.379 26.535 3 0.011852 28162 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 47.187 31.323 66279000 0 0 0 3592300 4350200 6566900 4453700 5605600 5446700 6803900 7660900 8132700 8239700 5426800 0 59286 202 53305 500891;500892;500893;500894;500895;500896;500897;500898;500899;500900;500901 397265;397266;397267;397268;397269 397266 5 VYIGEEEK Unmodified 965.47058 0.47057715 3483 Q8TBX8 PIP4K2C Phosphatidylinositol 5-phosphate 4-kinase type-2 gamma yes yes 0 0 0 By MS/MS 2 0 1 1 28.266 23.961 2 0.023196 31725 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.671 54.143 158910000 0 158910000 0 0 0 0 0 0 0 0 0 0 0 0 0 59287 3483 53306 500902 397270 397270 1 VYIIQACR Unmodified 1021.5379 0.53788563 1310 P31944 CASP14 Caspase-14;Caspase-14 subunit p17, mature form;Caspase-14 subunit p10, mature form;Caspase-14 subunit p20, intermediate form;Caspase-14 subunit p8, intermediate form yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 47.439 47.471 2 0.0077021 53686 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 88.734 78.597 50981000 0 0 0 32465000 3648400 2763900 0 2931100 0 0 0 6605000 2568000 0 0 59288 1310 53307 500903;500904;500905;500906;500907;500908;500909 397271;397272;397273;397274;397275;397276;397277 397271 7 VYIIQACRGEQR Unmodified 1491.7616 0.76163099 1310 P31944 CASP14 Caspase-14;Caspase-14 subunit p17, mature form;Caspase-14 subunit p10, mature form;Caspase-14 subunit p20, intermediate form;Caspase-14 subunit p8, intermediate form yes yes 0 0 1 By MS/MS 10 0 1 1 39.624 39.13 3 0.013005 43959 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 41.052 28.492 13811000 0 0 0 13811000 0 0 0 0 0 0 0 0 0 0 0 59289 1310 53308 500910 397278;397279 397278 2 VYISSPHSSPAHNK Unmodified 1522.7528 0.75284044 4266 Q9BZH6 WDR11 WD repeat-containing protein 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 5.78 3.79 3 2 4 2 1 2 1 1 1 1 19.52 17.615 3;4 0.0041063 26242 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.467 33.305 281150000 242090000 2478100 18917000 0 0 0 0 0 0 0 4426100 5804200 0 2470800 4958800 59290 4266 53309 500911;500912;500913;500914;500915;500916;500917;500918;500919 397280;397281;397282;397283;397284 397283 5 VYIYSSGSVEAQK Unmodified 1429.7089 0.70890994 4914 Q9UHY7 ENOPH1 Enolase-phosphatase E1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.38 0.484 5 3 1 6 1 50.464 45.208 2;3 0.0018597 57677 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.22 76.106 218550000 1125700 215530000 1901100 0 0 0 0 0 0 0 0 0 0 0 0 59291 4914 53310 500920;500921;500922;500923;500924;500925;500926;500927 397285;397286;397287;397288;397289;397290 397285 4 VYLEDGFAYVPLK Unmodified 1512.7864 0.78643198 1583 P49643 PRIM2 DNA primase large subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 6.9 3.81 3 1 6 1 2 1 1 1 1 1 1 1 88.169 86.375 2 0.0032422 108642 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.08 74.961 160610000 10258000 106880000 4096800 0 0 4435700 0 0 0 6333500 4833100 7149200 0 5549000 11075000 59292 1583 53311 500928;500929;500930;500931;500932;500933;500934;500935;500936;500937 397291;397292;397293;397294;397295;397296;397297 397294 4 VYLGALK Unmodified 762.46398 0.46397563 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 0 By MS/MS 10 0 1 1 48.47 48.699 2 0.03059 54334 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 74.597 9.2659 53935000 0 0 0 0 0 0 0 0 0 0 0 0 0 53935000 0 59293 2930 53312 500938 397298 397298 1 VYLGDIPLK Unmodified 1016.5906 0.59063271 2828 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 77.385 76.258 2 0.0079891 88132 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 70.919 57.144 1384100000 39822000 1026300000 38921000 11739000 12842000 24769000 16453000 15660000 15465000 25501000 27148000 36221000 15850000 27278000 50041000 59294 2828 53313 500939;500940;500941;500942;500943;500944;500945;500946;500947;500948;500949;500950;500951;500952;500953;500954 397299;397300;397301;397302;397303;397304;397305;397306;397307;397308;397309;397310;397311;397312;397313;397314;397315 397299 17 VYLPEPPFPHAELIQTNK Unmodified 2092.0993 0.099326699 4662 Q9NV88 INTS9 Integrator complex subunit 9 yes yes 0 0 0 By MS/MS 2 0 1 1 90.612 82.482 3 0.0011834 107029 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.794 39.542 27679000 27679000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59295 4662 53314 500955 397316 397316 1 VYLQNEYK Unmodified 1055.5288 0.52876073 1464 P42704 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 35.547 34.963 2 0.0063466 38047 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 101.64 70.354 340490000 0 237630000 0 5914100 3677400 8574800 4179300 10178000 0 11128000 9800300 10022000 10522000 8079300 20791000 59296 1464 53315 500956;500957;500958;500959;500960;500961;500962;500963;500964;500965;500966;500967;500968 397317;397318;397319;397320;397321;397322;397323;397324;397325;397326;397327;397328;397329 397328 13 VYMGEMGRLK Unmodified 1182.5889 0.58893492 1039 P16435 POR NADPH--cytochrome P450 reductase yes yes 0 0 1 By MS/MS 2 0 1 1 56.847 48.667 3 0.023003 66411 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.49 32.186 9408800 9408800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59297 1039 53316 500969 397330 397330 1 VYMHLPQTDNK Unmodified 1344.6496 0.64962092 1179 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 4 2 2 50.434 44.476 2;3 0.00046838 61299 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.11 88.879 38082000 19501000 0 18580000 0 0 0 0 0 0 0 0 0 0 0 0 59298 1179 53317 500970;500971;500972;500973 397331;397332;397333;397334 397332 3 VYMHLPQTDNK Oxidation (M) 1360.6445 0.64453555 1179 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 28.449 24.722 3 0.0060858 31109 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 55.314 46.31 28381000 0 17313000 11069000 0 0 0 0 0 0 0 0 0 0 0 0 59299 1179 53317 500974;500975 397335 397335 1709 1 VYNENLVHMIEHAQK Oxidation (M) 1839.8938 0.89376737 560 O75934 BCAS2 Pre-mRNA-splicing factor SPF27 yes yes 0 1 0 By MS/MS 2 0 1 1 64.025 55.746 3 0.0048705 75297 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 44.16 31.72 25709000 25709000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59300 560 53318 500976 397336 397336 724 1 VYNENLVHMIEHAQK Unmodified 1823.8989 0.89885275 560 O75934 BCAS2 Pre-mRNA-splicing factor SPF27 yes yes 0 0 0 By MS/MS 2 0 1 1 78.666 70.535 3 0.023734 92740 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 26.929 23.206 8626700 8626700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59301 560 53318 500977 397337 397337 1 VYNLLTPDSK Unmodified 1148.6077 0.60773933 4900 Q9UHF7 TRPS1 Zinc finger transcription factor Trps1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 58.352 58.578 2 0.0076472 66192 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 74.376 45.227 18126000 0 0 0 0 0 3850500 0 0 4512300 4073800 0 5689100 0 0 0 59302 4900 53319 500978;500979;500980;500981;500982 397338;397339;397340;397341 397341 4 VYNVTQHAVGIVVNK Unmodified 1639.9046 0.90459006 1509 P46778 RPL21 60S ribosomal protein L21 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 1 2 2 2 2 2 2 2 2 2 2 2 60.676 60.816 2;3 2.0943E-06 69274 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 111.94 94.569 423610000 0 0 0 12918000 18109000 29457000 21750000 34016000 17808000 42309000 38332000 70447000 23375000 36592000 78493000 59303 1509 53320 500983;500984;500985;500986;500987;500988;500989;500990;500991;500992;500993;500994;500995;500996;500997;500998;500999;501000;501001;501002;501003;501004;501005 397342;397343;397344;397345;397346;397347;397348;397349;397350;397351;397352;397353;397354;397355;397356;397357;397358 397356 10 VYNYNHLMPTR Oxidation (M) 1422.6714 0.671419 1847 P61353 RPL27 60S ribosomal protein L27 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 16 1 2 2 2 2 1 1 1 2 1 1 36.614 36.763 2;3 0.0017166 39400 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.92 50.587 303690000 0 0 0 20159000 29190000 32415000 41193000 30512000 2924200 4836700 4533200 71585000 58310000 0 8034000 59304 1847 53321 501006;501007;501008;501009;501010;501011;501012;501013;501014;501015;501016;501017;501018;501019;501020;501021 397359;397360;397361;397362;397363;397364;397365;397366;397367;397368 397362 3001 8 VYNYNHLMPTR Unmodified 1406.6765 0.67650438 1847 P61353 RPL27 60S ribosomal protein L27 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 1 1 2 1 1 1 1 1 2 2 51.232 51.426 2;3 1.449E-07 57889 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 125.74 115.69 705890000 0 0 0 27375000 34076000 39904000 36991000 51949000 46629000 50930000 63569000 68960000 49919000 91762000 143820000 59305 1847 53321 501022;501023;501024;501025;501026;501027;501028;501029;501030;501031;501032;501033;501034;501035;501036 397369;397370;397371;397372;397373;397374;397375;397376;397377;397378;397379;397380;397381;397382;397383;397384;397385;397386;397387;397388;397389;397390 397370 22 VYPPVPEQLQLR Unmodified 1437.798 0.79799972 34 A7E2V4 ZSWIM8 Zinc finger SWIM domain-containing protein 8 yes yes 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 78.466 78.57 2 0.028937 90717 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 35.511 15.734 59908000 0 0 0 0 3941500 3562600 4299900 5470400 4272800 4950400 5884700 8345000 5132300 5640900 8407800 59306 34 53322 501037;501038;501039;501040;501041;501042;501043;501044;501045;501046;501047 397391;397392 397391 2 VYPQAVYFPIR Unmodified 1351.7289 0.72885752 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 82.084 82.232 2 0.00025931 95172 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 109.86 86.434 56537000 0 0 0 0 0 7496800 0 7466900 3934400 6774000 5151400 9620700 0 0 16093000 59307 5189 53323 501048;501049;501050;501051;501052;501053;501054;501055;501056 397393;397394;397395;397396;397397;397398;397399;397400;397401;397402;397403 397394 11 VYPSSLSK Unmodified 879.47018 0.47018322 3170 Q86VP6 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 25.778 25.98 2 0.031953 26347 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 54.611 17.518 344840000 0 0 0 11317000 10845000 40895000 17706000 19808000 8683400 42276000 33021000 31545000 25956000 31490000 71301000 59308 3170 53324 501057;501058;501059;501060;501061;501062;501063;501064;501065;501066;501067;501068 397404;397405;397406 397405 3 VYQEIAILK Unmodified 1075.6277 0.6277465 3352 Q8N5S9 CAMKK1 Calcium/calmodulin-dependent protein kinase kinase 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 69.187 69.305 2 0.016224 79432 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 56.721 19.562 20430000 0 0 0 1174900 0 2827200 1448800 1395600 0 2850900 3144700 3391900 0 0 4196400 59309 3352 53325 501069;501070;501071;501072;501073;501074;501075;501076 397407;397408;397409 397409 3 VYQETSEMR Unmodified 1141.5074 0.50737336 2575 Q15773 MLF2 Myeloid leukemia factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.489 20.595 2 0.0033377 21265 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 131.06 118.86 55209000 0 0 0 11068000 9704300 0 0 8816600 0 9844800 0 0 0 0 15775000 59310 2575 53326 501077;501078;501079;501080;501081;501082;501083;501084;501085;501086;501087;501088 397410;397411;397412;397413;397414;397415;397416;397417;397418;397419;397420;397421 397411 12 VYQETSEMR Oxidation (M) 1157.5023 0.50228798 2575 Q15773 MLF2 Myeloid leukemia factor 2 yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 10.118 10.359 2 0.026756 8496 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 44.349 36.409 11681000 0 0 0 0 0 0 0 1232500 1107600 0 0 2650700 3280400 2272300 1137700 59311 2575 53326 501089;501090;501091;501092;501093;501094 397422;397423 397423 2 VYQEWIQQEEK Unmodified 1478.7042 0.70415892 2880 Q6GYQ0 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 2 1 10.879 11.058 2;3 8.0158E-05 70904 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 155.06 140.37 31142000 0 0 0 0 0 3519300 5005600 0 3712600 4458500 3746100 0 5400900 0 5298800 59312 2880 53327 501095;501096;501097;501098;501099;501100;501101;501102;501103 397424;397425;397426;397427;397428 397425 5 VYQLGGTR Unmodified 892.47667 0.47666558 3618 Q92541 RTF1 RNA polymerase-associated protein RTF1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.455 27.653 2 0.03349 29826 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 53.679 18.602 175540000 0 0 0 7445500 9531000 14522000 13285000 11599000 9810100 16607000 16463000 26357000 14619000 14189000 21112000 59313 3618 53328 501104;501105;501106;501107;501108;501109;501110;501111;501112;501113;501114;501115 397429;397430 397430 2 VYQLGGTRTNK Unmodified 1235.6622 0.66223452 3618 Q92541 RTF1 RNA polymerase-associated protein RTF1 homolog yes yes 0 0 1 By MS/MS 2 0 1 1 24.664 19.586 3 0.028744 27887 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 38.478 29.748 16260000 16260000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59314 3618 53329 501116 397431 397431 1 VYQLLVNEQEPCK Unmodified 1618.8025 0.80249275 3903 Q96K76 USP47 Ubiquitin carboxyl-terminal hydrolase 47 yes yes 0 0 0 By MS/MS 2 0 1 1 69.286 63.417 2 3.174E-34 80820 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 209.1 180.37 86841000 0 86841000 0 0 0 0 0 0 0 0 0 0 0 0 0 59315 3903 53330 501117 397432 397432 1 VYQMLQK Unmodified 908.47897 0.47897377 2313 Q13546 RIPK1 Receptor-interacting serine/threonine-protein kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 33.825 34.103 2 0.029159 36350 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 75.915 40.81 49799000 0 0 0 0 4156600 0 0 0 3574200 8380800 0 7449400 4910800 7516000 13811000 59316 2313 53331 501118;501119;501120;501121;501122;501123;501124 397433;397434 397434 2 VYQNFVDSK Unmodified 1098.5346 0.53457439 2097 Q03468 ERCC6 DNA excision repair protein ERCC-6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 38.118 37.914 2 0.0031256 42517 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 91.069 57.553 256280000 0 66396000 0 0 12971000 16063000 15941000 13840000 11447000 17154000 15294000 25044000 15639000 18167000 28320000 59317 2097 53332 501125;501126;501127;501128;501129;501130;501131;501132;501133;501134;501135;501136 397435;397436;397437;397438;397439;397440;397441;397442;397443;397444;397445;397446;397447;397448;397449;397450;397451;397452 397452 18 VYQNHVQHLISEK Unmodified 1593.8263 0.82633974 2224 Q13017 ARHGAP5 Rho GTPase-activating protein 5 yes yes 0 0 0 By MS/MS 2 0 1 1 43.049 36.256 3 0.020857 49932 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 37.013 19.761 15312000 15312000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59318 2224 53333 501137 397453 397453 1 VYQPVSCPLSDLSENVESVVNEEK Unmodified 2720.2851 0.28509115 4030 Q99590 SCAF11 Protein SCAF11 yes yes 0 0 0 By MS/MS 3 0 1 1 94.146 90.907 3 0.00010825 108894 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 42.612 40.036 3867900 0 3867900 0 0 0 0 0 0 0 0 0 0 0 0 0 59319 4030 53334 501138 397454;397455 397455 2 VYQWDDPDPR Unmodified 1289.5677 0.56766543 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.669 51.817 2 0.0014004 58654 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 91.584 83.052 747730000 0 0 0 34283000 22727000 117430000 37741000 39870000 28823000 67940000 79070000 73000000 49113000 79692000 118030000 59320 1565 53335 501139;501140;501141;501142;501143;501144;501145;501146;501147;501148;501149;501150 397456;397457;397458;397459;397460;397461;397462;397463;397464;397465;397466;397467;397468 397465 12 VYQWDDPDPRLFDHPESPTPNPTEPLFLAQAEVYK Unmodified 4110.964 0.96396201 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 1 By MS/MS By MS/MS 2.67 0.471 1 2 2 1 96.708 91.737 4 1.0293E-62 115284 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 103.01 98.901 266830000 262090000 4739300 0 0 0 0 0 0 0 0 0 0 0 0 0 59321 1565 53336 501151;501152;501153 397469;397470;397471;397472 397472 4 VYRDDTFVGR Unmodified 1226.6044 0.60438529 4802 Q9P206 KIAA1522 Uncharacterized protein KIAA1522 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.09 32.276 3 0.0030205 35628 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 72.652 61.895 286550000 0 0 0 15545000 18591000 25892000 20864000 21562000 19953000 26448000 31528000 39090000 23568000 14780000 28725000 59322 4802 53337 501154;501155;501156;501157;501158;501159;501160;501161;501162;501163;501164;501165 397473;397474;397475;397476;397477;397478;397479;397480;397481;397482;397483 397483 8 VYRIEGDETSTEAATR Unmodified 1796.8541 0.85407063 1686 P52434 POLR2H DNA-directed RNA polymerases I, II, and III subunit RPABC3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 34.783 35.072 3 2.5222E-15 37517 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 102.78 84.859 199020000 0 0 0 0 5382600 0 8487000 0 9168700 0 30573000 33544000 22888000 22240000 66732000 59323 1686 53338 501166;501167;501168;501169;501170;501171;501172;501173;501174 397484;397485;397486;397487;397488;397489;397490;397491;397492;397493;397494 397487 11 VYSFLDK Unmodified 870.44872 0.4487195 2756 Q5SRE5 NUP188 Nucleoporin NUP188 homolog yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 55.063 55.02 2 0.03326 61325 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 72.138 34.493 79215000 0 0 0 6787900 7222800 11253000 10119000 10723000 5918500 12110000 0 0 0 15081000 0 59324 2756 53339 501175;501176;501177;501178;501179;501180;501181;501182 397495 397495 1 VYSLFLDESR Unmodified 1227.6136 0.61355299 5077 Q9Y230 RUVBL2 RuvB-like 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.585 76.645 2 0.00090505 88351 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 115.71 78.239 144110000 0 0 0 5692700 4701900 9307700 7472000 5643600 9542100 13340000 14583000 26439000 15407000 10902000 21075000 59325 5077 53340 501183;501184;501185;501186;501187;501188;501189;501190;501191;501192;501193;501194 397496;397497;397498;397499;397500;397501;397502;397503;397504;397505;397506;397507;397508;397509 397507 12 VYSMLQVNK Oxidation (M) 1096.5587 0.55868065 5367 yes yes 0 1 0 By MS/MS 10 0 1 1 37.454 37.756 2 0.010822 40849 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 56.547 7.4501 + 3038900 0 0 0 0 0 0 0 0 0 0 0 0 0 3038900 0 59326 5367 53341 501195 397510 397510 6749 1 VYSQLTMQK Unmodified 1096.5587 0.55868065 4423 Q9H6S3 EPS8L2 Epidermal growth factor receptor kinase substrate 8-like protein 2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 37.149 37.89 2 0.0030065 41544 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 91.516 24.717 16933000 0 0 0 0 0 0 0 0 0 0 0 7240700 0 0 9692200 59327 4423 53342 501196;501197 397511;397512 397512 2 VYSRALQEELQFSSK Unmodified 1783.9105 0.9104633 3012 Q6ZSZ5 ARHGEF18 Rho guanine nucleotide exchange factor 18 yes yes 0 0 1 By MS/MS 2 0 1 1 75.317 67.186 3 0.00032903 88667 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.41 66.907 17534000 17534000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59328 3012 53343 501198 397513 397513 1 VYSRGDSEPLSEAAQAHTR Unmodified 2072.9875 0.98754442 463 O75150 RNF40 E3 ubiquitin-protein ligase BRE1B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 35.28 35.462 3;4 2.9235E-24 38910 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 102.47 87.507 651510000 0 0 0 26290000 24323000 52635000 34943000 56113000 53685000 79872000 48266000 49728000 64310000 65809000 95540000 59329 463 53344 501199;501200;501201;501202;501203;501204;501205;501206;501207;501208;501209;501210;501211;501212;501213;501214;501215;501216;501217;501218;501219;501220;501221;501222 397514;397515;397516;397517;397518;397519;397520;397521;397522;397523;397524;397525;397526;397527;397528;397529;397530;397531 397516 15 VYSTALSSFLTK Unmodified 1315.7024 0.702368 4096 Q9BQG0 MYBBP1A Myb-binding protein 1A yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 81.896 82.052 2 0.015429 94612 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.486 43.776 20974000 0 0 0 0 0 0 0 1943100 867400 3498800 3623600 2926600 1968700 0 6145500 59330 4096 53345 501223;501224;501225;501226;501227;501228;501229 397532 397532 1 VYSTSVTGSR Unmodified 1055.5247 0.52473799 4361 Q9H299 SH3BGRL3 SH3 domain-binding glutamic acid-rich-like protein 3 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 20.667 20.951 2 0.0015063 21332 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 90.64 67.86 111890000 0 0 0 0 1918300 0 3658600 4778000 0 0 21962000 23973000 0 15641000 39955000 59331 4361 53346 501230;501231;501232;501233;501234;501235;501236 397533;397534;397535;397536 397536 4 VYSVLSDREQR Unmodified 1350.6892 0.68917755 3596 Q8WXX5 DNAJC9 DnaJ homolog subfamily C member 9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.574 34.757 3 3.1484E-05 37589 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 100.69 87.854 314470000 0 0 0 22398000 14559000 31017000 17656000 13821000 17473000 27683000 41724000 30688000 27682000 23237000 46536000 59332 3596 53347 501237;501238;501239;501240;501241;501242;501243;501244;501245;501246;501247;501248 397537;397538;397539;397540;397541;397542;397543;397544;397545;397546;397547;397548 397542 11 VYSYALALK Unmodified 1026.575 0.57498264 4970 Q9UKK9 NUDT5 ADP-sugar pyrophosphatase yes yes 0 0 0 By MS/MS 10 0 1 1 65.873 66.41 2 0.023253 75430 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.923 41.737 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59333 4970 53348 501249 397549 397549 1 VYSYFECR Unmodified 1122.4804 0.48043033 1481 P43490 NAMPT Nicotinamide phosphoribosyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 49.837 50.037 2 0.017656 55584 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 65.313 53.544 46875000 0 0 0 0 2663200 0 5888600 0 0 0 8083500 0 5591100 6766500 17882000 59334 1481 53349 501250;501251;501252;501253;501254;501255 397550;397551;397552 397552 3 VYSYFECREK Unmodified 1379.618 0.61798644 1481 P43490 NAMPT Nicotinamide phosphoribosyltransferase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 46.07 39.94 2;3 0.027505 55750 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.108 42.563 233500000 206060000 16770000 10673000 0 0 0 0 0 0 0 0 0 0 0 0 59335 1481 53350 501256;501257;501258;501259 397553;397554 397554 2 VYTDVNTHRPR Unmodified 1356.6898 0.68984625 1964 P68400;Q8NEV1 CSNK2A1;CSNK2A3 Casein kinase II subunit alpha;Casein kinase II subunit alpha 3 yes no 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 16.131 16.383 3 0.00027834 15433 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 76.843 68.441 112170000 0 0 0 4900500 0 6088000 0 1083300 0 0 18354000 15518000 13735000 15495000 36999000 59336 1964 53351 501260;501261;501262;501263;501264;501265;501266;501267 397555;397556;397557;397558;397559;397560;397561 397558 4 VYTDVQQVASSLTHPR Unmodified 1799.9166 0.91661131 2384 Q14166 TTLL12 Tubulin--tyrosine ligase-like protein 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 75.093 75.189 3 1.1447E-07 86226 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.548 82.768 144690000 0 0 0 2308200 0 17545000 3807100 7347300 6883500 17550000 14100000 15195000 5416100 11504000 43036000 59337 2384 53352 501268;501269;501270;501271;501272;501273;501274;501275;501276;501277;501278 397562;397563;397564;397565;397566;397567;397568;397569;397570;397571;397572 397565 10 VYTLSVSGDR Unmodified 1095.556 0.55603812 355 O43684 BUB3 Mitotic checkpoint protein BUB3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 2 1 1 1 1 1 46.462 46.628 2 0.0009358 52712 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 111.95 89.207 745810000 0 0 0 24818000 32974000 39534000 56258000 44497000 40889000 72114000 92852000 77666000 53912000 70846000 139450000 59338 355 53353 501279;501280;501281;501282;501283;501284;501285;501286;501287;501288;501289;501290;501291 397573;397574;397575;397576;397577;397578;397579;397580;397581;397582;397583;397584;397585 397573 11 VYTPVASR Unmodified 891.48142 0.48141661 4622 Q9NS91 RAD18 E3 ubiquitin-protein ligase RAD18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 26.804 26.613 2 0.033366 28804 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 53.754 18.649 14738000 0 0 0 3917800 4844000 0 5976600 0 0 0 0 0 0 0 0 59339 4622 53354 501292;501293;501294 397586 397586 1 VYTPVGK Unmodified 762.42759 0.42759012 1771 P55786 NPEPPS Puromycin-sensitive aminopeptidase yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 21.79 22.023 2 0.023371 21829 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.734 64.548 158430000 0 0 0 22316000 3036500 5389900 0 6114300 0 5740000 24066000 22945000 6836700 12905000 49078000 59340 1771 53355 501295;501296;501297;501298;501299;501300;501301;501302;501303;501304 397587;397588;397589;397590;397591;397592 397587 6 VYTVDLGR Unmodified 921.49198 0.4919813 746 P01833 PIGR Polymeric immunoglobulin receptor;Secretory component yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 10 1 1 2 1 1 2 1 1 48.037 48.261 2 0.025292 54471 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 58.815 17.513 88400000 0 0 0 4281600 0 2695300 5678300 4539800 0 44152000 11174000 6885100 0 0 8994000 59341 746 53356 501305;501306;501307;501308;501309;501310;501311;501312;501313;501314 397593;397594 397593 2 VYTVGPDYAHAEAR Unmodified 1547.7369 0.73685603 317 O43314;Q6PFW1 PPIP5K2;PPIP5K1 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2;Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1 yes no 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 42.111 42.501 3 0.0085923 47301 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 27.028 17.495 15338000 0 0 0 0 0 0 0 0 0 4318200 0 0 0 3332500 7687600 59342 317 53357 501315;501316;501317 397595 397595 1 VYTVGPDYAHAEARK Unmodified 1675.8318 0.83181904 317 O43314;Q6PFW1 PPIP5K2;PPIP5K1 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2;Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1 yes no 0 0 1 By MS/MS By MS/MS 2 0 4 2 2 41.201 36.03 3;4 0.00020714 49661 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.541 73.318 200250000 180610000 0 19639000 0 0 0 0 0 0 0 0 0 0 0 0 59343 317 53358 501318;501319;501320;501321 397596;397597;397598;397599 397597 3 VYTVVDEMFLAGEIRETSQTK Unmodified 2415.1992 0.19917668 1725 P53680 AP2S1 AP-2 complex subunit sigma yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 94.243 88.42 3 8.3496E-59 112888 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 134.9 113.3 35358000 35358000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59344 1725 53359 501322;501323 397600;397601;397602 397602 3 VYTVVDEMFLAGEIRETSQTK Oxidation (M) 2431.1941 0.1940913 1725 P53680 AP2S1 AP-2 complex subunit sigma yes yes 0 1 1 By MS/MS 2 0 1 1 88.342 80.211 3 7.9542E-18 104346 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.49 93.781 14739000 14739000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59345 1725 53359 501324 397603 397603 2805 1 VYVGNLGNNGNK Unmodified 1247.6258 0.62584901 2017 P84103 SRSF3 Serine/arginine-rich splicing factor 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 34.69 33.608 2 1.0154E-66 37405 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 194.29 142.95 1124600000 165100000 421870000 3469100 23601000 38665000 33824000 39541000 33290000 30537000 45888000 67260000 66503000 43141000 42932000 68984000 59346 2017 53360 501325;501326;501327;501328;501329;501330;501331;501332;501333;501334;501335;501336;501337;501338;501339;501340 397604;397605;397606;397607;397608;397609;397610;397611;397612;397613;397614;397615;397616;397617;397618;397619;397620 397604 16 VYVGNLGNNGNKTELER Unmodified 1875.9439 0.94388869 2017 P84103 SRSF3 Serine/arginine-rich splicing factor 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 46.266 46.423 3 0.00065678 52029 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 52.172 35.866 33379000 0 0 0 0 11033000 0 9301600 0 0 0 0 8766500 4278000 0 0 59347 2017 53361 501341;501342;501343;501344 397621;397622;397623 397621 2 VYVGNLGTGAGK Unmodified 1134.6033 0.60332266 2619 Q16629 SRSF7 Serine/arginine-rich splicing factor 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 42.375 41.17 2 2.7328E-16 50358 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 153.05 92.285 990710000 80386000 454840000 4557500 23251000 22914000 27929000 26061000 26322000 30141000 40243000 53181000 54227000 44238000 39419000 63004000 59348 2619 53362 501345;501346;501347;501348;501349;501350;501351;501352;501353;501354;501355;501356;501357;501358;501359;501360 397624;397625;397626;397627;397628;397629;397630;397631;397632;397633;397634;397635;397636;397637;397638;397639;397640;397641 397632 18 VYVGNLGTGAGKGELER Unmodified 1718.8951 0.89514758 2619 Q16629 SRSF7 Serine/arginine-rich splicing factor 7 yes yes 0 0 1 By MS/MS 10 0 1 1 50.934 50.996 3 0.0020773 57640 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 35.872 31.607 10660000 0 0 0 0 0 0 10660000 0 0 0 0 0 0 0 0 59349 2619 53363 501361 397642;397643 397642 2 VYVIGSFVDK Unmodified 1125.607 0.60701105 3042 Q7L0Y3 TRMT10C Mitochondrial ribonuclease P protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 78.044 74.561 2 0.0053747 95880 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.862 51.676 43835000 30808000 0 5613100 0 0 0 0 0 0 0 0 0 0 0 7414300 59350 3042 53364 501362;501363;501364 397644;397645;397646;397647 397645 4 VYVQHLLK Unmodified 998.5913 0.59130141 1039 P16435 POR NADPH--cytochrome P450 reductase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 43.031 43.209 2 0.015683 47525 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 68.485 47.786 88435000 0 0 0 5365700 6266600 5232800 6631600 7267100 0 6417200 7347200 14761000 11973000 8442600 8730100 59351 1039 53365 501365;501366;501367;501368;501369;501370;501371;501372;501373;501374;501375;501376 397648;397649;397650;397651;397652 397651 5 VYVTAESR Unmodified 923.47125 0.47124585 1462 P42684 ABL2 Abelson tyrosine-protein kinase 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 19.975 20.222 2 0.017693 20787 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 65.252 33.963 11758000 0 0 0 0 0 1436200 0 1885800 0 2845700 0 0 0 1941100 3649700 59352 1462 53366 501377;501378;501379;501380;501381 397653 397653 1 VYVVEGSK Unmodified 879.47018 0.47018322 550 O75844 ZMPSTE24 CAAX prenyl protease 1 homolog yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 22.081 22.246 2 0.023266 23617 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 60.478 31.101 56371000 0 0 0 0 7107300 0 7274500 8455900 0 14114000 0 0 0 10302000 9116900 59353 550 53367 501382;501383;501384;501385;501386;501387 397654;397655 397655 2 VYWDNGAQIISPHDK Unmodified 1741.8424 0.84238373 3844 Q96G03 PGM2 Phosphoglucomutase-2 yes yes 0 0 0 By MS/MS 2 0 1 1 70.617 67.043 3 0.04159 82799 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 34.82 30.352 33806000 0 0 33806000 0 0 0 0 0 0 0 0 0 0 0 0 59354 3844 53368 501388 397656 397656 0 VYWETGAQITSPHDK Unmodified 1730.8264 0.82639932 2943 Q6PCE3 PGM2L1 Glucose 1,6-bisphosphate synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 63.048 57.019 3 0.00030948 74369 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 61.641 53.665 24782000 14498000 0 10284000 0 0 0 0 0 0 0 0 0 0 0 0 59355 2943 53369 501389;501390;501391 397657;397658;397659;397660 397657 4 VYWNDGLDQYR Unmodified 1427.647 0.64697839 310 O43252 PAPSS1 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes yes 0 0 0 By MS/MS 10 0 1 1 69.599 69.568 2 0.042542 79866 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 36.424 11.587 27798000 0 0 0 0 0 27798000 0 0 0 0 0 0 0 0 0 59356 310 53370 501392 397661 397661 1 VYYDISTAK Unmodified 1058.5284 0.52842638 455 O75116 ROCK2 Rho-associated protein kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 44.217 43.244 2 0.01612 47589 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 56.81 48.48 329740000 0 250640000 0 4290400 2837000 9601900 5886400 0 0 8988200 22063000 0 0 6952500 18482000 59357 455 53371 501393;501394;501395;501396;501397;501398;501399;501400;501401;501402 397662;397663;397664;397665;397666 397666 5 VYYDPNK Unmodified 897.42323 0.42323303 4693 Q9NW82 WDR70 WD repeat-containing protein 70 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 20.956 21.232 2 0.032282 21608 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.039 46.93 129380000 0 0 0 6568100 0 0 11441000 8925900 9050100 13225000 18350000 16048000 13263000 12016000 20489000 59358 4693 53372 501403;501404;501405;501406;501407;501408;501409;501410;501411;501412 397667;397668;397669;397670 397670 4 VYYSYSQISHK Unmodified 1373.6616 0.66156582 4834 Q9UBB9 TFIP11 Tuftelin-interacting protein 11 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 45.579 39.954 3 3.1646E-06 55164 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.88 97.736 47417000 42024000 0 5393000 0 0 0 0 0 0 0 0 0 0 0 0 59359 4834 53373 501413;501414 397671 397671 1 VYYTAGYNSPVK Unmodified 1360.6663 0.66631685 5256 Q9Y5Z4 HEBP2 Heme-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS 5 3.56 1 1 1 2 1 54.014 48.667 2 0.00028753 62965 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.14 86.18 120230000 0 120230000 0 0 0 0 0 0 0 0 0 0 0 0 0 59360 5256 53374 501415;501416;501417 397672;397673;397674;397675 397673 4 VYYYNAR Unmodified 947.45012 0.45011648 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.531 29.723 2 0.023325 31868 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 91.26 71.782 1164700000 0 0 0 51067000 66299000 61358000 88154000 72270000 76000000 81877000 106830000 156950000 131290000 129210000 143430000 59361 213 53375 501418;501419;501420;501421;501422;501423;501424;501425;501426;501427;501428;501429 397676;397677;397678;397679;397680;397681;397682;397683 397679 7 WAAALEGYRK Unmodified 1163.6087 0.60874239 2128 Q06546 GABPA GA-binding protein alpha chain yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 46.459 46.523 3 0.026902 51514 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 33.057 25.929 61543000 0 0 0 4343800 3423900 8150500 5695900 0 5797100 11010000 10799000 12323000 0 0 0 59362 2128 53376 501430;501431;501432;501433;501434;501435;501436;501437 397684;397685;397686 397685 3 WAAGQNK Unmodified 773.38204 0.38203692 438 O60869 EDF1 Endothelial differentiation-related factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 9.0055 5.92 2 0.023387 10124 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.94 93.968 923110000 432660000 485660000 4795300 0 0 0 0 0 0 0 0 0 0 0 0 59363 438 53377 501438;501439;501440 397687;397688 397688 2 WAASLENLLEDPEGVK Unmodified 1769.8836 0.88357984 351 O43665 RGS10 Regulator of G-protein signaling 10 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 94.828 91.17 2 2.9652E-23 113096 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.64 99.13 40278000 0 39632000 646130 0 0 0 0 0 0 0 0 0 0 0 0 59364 351 53378 501441;501442 397689 397689 1 WAAVVVPSGEEQR Unmodified 1426.7205 0.72047768 1281;753 P01889;P30460;P30480;Q04826;P30491;Q29940;Q29718;P30685;P30498;P30493;P30495;P30490;P30462;P18465;P18464;P18463;P10319;P03989;P30487;P30461;P30483;P30485;P30488;Q29963;Q07000;P30508;P30501;P30505;Q29960 HLA-B;HLA-C HLA class I histocompatibility antigen, B-7 alpha chain;HLA class I histocompatibility antigen, B-8 alpha chain;HLA class I histocompatibility antigen, B-42 alpha chain;HLA class I histocompatibility antigen, B-40 alpha chain;HLA class I histocompatibility antigen, B-53 alpha chain;HLA class I histocompatibility antigen, B-59 alpha chain;HLA class I histocompatibility antigen, B-82 alpha chain;HLA class I histocompatibility antigen, B-35 alpha chain;HLA class I histocompatibility antigen, B-78 alpha chain;HLA class I histocompatibility antigen, B-55 alpha chain;HLA class I histocompatibility antigen, B-56 alpha chain;HLA class I histocompatibility antigen, B-52 alpha chain;HLA class I histocompatibility antigen, B-14 alpha chain;HLA class I histocompatibility antigen, B-57 alpha chain;HLA class I histocompatibility antigen, B-51 alpha chain;HLA class I histocompatibility antigen, B-37 alpha chain;HLA class I histocompatibility antigen, B-58 alpha chain;HLA class I histocompatibility antigen, B-27 alpha chain;HLA class I histocompatibility antigen, B-49 alpha chain;HLA class I histocompatibility antigen, B-13 alpha chain;HLA class I histocompatibility antigen, B-45 alpha chain;HLA class I histocompatibility antigen, B-47 alpha chain;HLA class I histocompatibility antigen, B-50 alpha chain;HLA class I histocompatibility antigen, Cw-6 alpha chain;HLA class I histocompatibility antigen, Cw-15 alpha chain;HLA class I histocompatibility antigen, Cw-12 alpha chain;HLA class I histocompatibility antigen, Cw-2 alpha chain;HLA class I histocompatibility antigen, Cw-8 alpha chain;HLA class I histocompatibility antigen, Cw-16 alpha chain no no 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 62.818 62.901 2 0.00024615 72271 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 82.749 70.536 76966000 0 0 0 6879700 3478200 3398900 6009800 7770700 4792700 0 6883600 17395000 0 6941400 13417000 59365 753;1281 53379 501443;501444;501445;501446;501447;501448;501449;501450;501451;501452 397690;397691;397692;397693;397694;397695;397696 397696 7 WADPQISESNFSPK Unmodified 1604.7471 0.74708636 4206 Q9BW91 NUDT9 ADP-ribose pyrophosphatase, mitochondrial yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 69.285 69.596 2 0.00055685 79285 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.08 58.855 14056000 0 0 0 0 0 0 0 0 0 0 3558000 0 0 1931400 8566700 59366 4206 53380 501453;501454;501455 397697;397698 397697 2 WAEDNEVQNCMACGK Unmodified 1810.7073 0.70728851 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 0 By MS/MS 2 0 1 1 50.96 45.214 2 5.3748E-10 58837 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.67 106.91 5798300 0 5798300 0 0 0 0 0 0 0 0 0 0 0 0 0 59367 2495 53381 501456 397699 397699 1 WAEESLHSLTSK Unmodified 1386.6779 0.67794416 2855 Q68CZ6 HAUS3 HAUS augmin-like complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 61.044 55.062 2 0.0028813 74220 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.456 68.76 123140000 8155600 80145000 34844000 0 0 0 0 0 0 0 0 0 0 0 0 59368 2855 53382 501457;501458;501459 397700;397701 397700 2 WAEEYLEQSEEK Unmodified 1539.6729 0.67291837 1627 P50542 PEX5 Peroxisomal targeting signal 1 receptor yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 58.18 58.529 2 0.001424 66030 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.417 75.727 15738000 0 0 0 0 0 0 0 0 0 0 3304700 0 3636200 3436300 5360600 59369 1627 53383 501460;501461;501462;501463 397702;397703;397704 397702 1 WAEYHADIYDK Unmodified 1409.6252 0.62518031 4613 Q9NRX4 PHPT1 14 kDa phosphohistidine phosphatase yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 56.559 50.507 3 0.010742 68625 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.991 36.267 140000000 36929000 0 103070000 0 0 0 0 0 0 0 0 0 0 0 0 59370 4613 53384 501464;501465 397705;397706 397705 2 WAIADAQSAIEK Unmodified 1301.6616 0.66156582 2144 Q07889;Q07890 SOS1;SOS2 Son of sevenless homolog 1;Son of sevenless homolog 2 yes no 0 0 0 By MS/MS 2.5 0.5 1 1 2 74.655 70.349 2 0.0053425 88016 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.781 40.336 72555000 0 72555000 0 0 0 0 0 0 0 0 0 0 0 0 0 59371 2144 53385 501466;501467 397707 397707 1 WAIAQLNYADMLK Oxidation (M) 1551.7755 0.77554972 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 1 0 By matching By matching By MS/MS 10 0 3 1 1 1 84.587 84.693 2 0.0012425 97403 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.213 52.988 15459000 0 0 0 0 0 3214100 0 0 0 4942600 0 0 0 0 7302500 59372 2392 53386 501468;501469;501470 397708 397708 3928 1 WALSQSNPSALR Unmodified 1328.6837 0.68369824 1755 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.015 63.11 2 4.5897E-08 71232 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 147.75 88.773 531420000 0 0 0 27484000 14637000 29293000 18449000 19677000 10196000 32522000 65002000 59925000 23939000 59062000 171230000 59373 1755 53387 501471;501472;501473;501474;501475;501476;501477;501478;501479;501480;501481;501482 397709;397710;397711;397712;397713;397714;397715;397716;397717;397718;397719;397720;397721;397722;397723 397714 15 WANFHLENSGWQK Unmodified 1615.7532 0.75317479 986 P13797 PLS3 Plastin-3 yes yes 0 0 0 By MS/MS 10 0 1 1 70.361 70.796 3 0.00070526 80891 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.897 41.609 21134000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21134000 59374 986 53388 501483 397724;397725 397725 2 WAQEDLLEEQK Unmodified 1387.662 0.66195975 512 O75528 TADA3 Transcriptional adapter 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 61.783 61.864 2 0.00066247 70598 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 78.098 64.405 12816000 0 0 0 0 0 8633800 0 0 4182400 0 0 0 0 0 0 59375 512 53389 501484;501485;501486 397726;397727;397728 397726 3 WAREEEEAQR Unmodified 1302.5953 0.59527717 2994 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 14.104 14.298 3 1.2305E-11 13252 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 141.95 126.57 133870000 0 0 0 5608300 0 7541400 6163700 7590700 5780000 17443000 14170000 17929000 16500000 14490000 20655000 59376 2994 53390 501487;501488;501489;501490;501491;501492;501493;501494;501495;501496;501497 397729;397730;397731;397732;397733;397734 397732 4 WASDEMPSTSNGESSK Unmodified 1711.6995 0.69954382 2813 Q5VTB9 RNF220 E3 ubiquitin-protein ligase RNF220 yes yes 0 0 0 By MS/MS 2 0 1 1 41.931 36.836 2 6.3084E-05 47939 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.07 115.82 12767000 0 12767000 0 0 0 0 0 0 0 0 0 0 0 0 0 59377 2813 53391 501498 397735 397735 1 WATHGEPSPVNSHPQR Unmodified 1798.8499 0.84992873 2125 Q06210 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 2 1 1 2 2 2 1 2 27.409 27.714 3;4 0.00058168 29158 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 56.514 44.491 224620000 0 0 0 0 7518700 27084000 0 13203000 7988600 23354000 38470000 36551000 7797200 0 62656000 59378 2125 53392 501499;501500;501501;501502;501503;501504;501505;501506;501507;501508;501509;501510;501511;501512 397736;397737;397738;397739;397740;397741 397741 5 WAVSSGSSTALLYSK Unmodified 1555.7882 0.7882229 261 O15164 TRIM24 Transcription intermediary factor 1-alpha yes yes 0 0 0 By MS/MS 2 0 1 1 79.17 71.04 2 0.0027196 93255 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.739 56.132 34317000 34317000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59379 261 53393 501513 397742 397742 1 WDAWNELK Unmodified 1060.4978 0.49779495 835 P07108 DBI Acyl-CoA-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 73.912 72.682 2 0.011707 91054 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.46 97.993 730260000 55951000 317200000 108810000 1162900 9525100 12597000 6981500 11134000 9509100 13901000 32326000 42715000 0 19711000 88742000 59380 835 53394 501514;501515;501516;501517;501518;501519;501520;501521;501522;501523;501524;501525;501526;501527;501528 397743;397744;397745;397746;397747;397748;397749 397743 7 WDDPYYDIAR Unmodified 1312.5724 0.57241646 2146 Q07960 ARHGAP1 Rho GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 73.076 73.185 2 0.019106 84219 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 48.091 37.381 86597000 0 0 0 4731100 0 13097000 3765300 5542100 5602500 9708000 8289900 8422800 7068800 5968300 14401000 59381 2146 53395 501529;501530;501531;501532;501533;501534;501535;501536;501537;501538;501539 397750;397751;397752 397750 3 WDDPYYDIARHQIVEVAGDDK Unmodified 2504.1608 0.16081734 2146 Q07960 ARHGAP1 Rho GTPase-activating protein 1 yes yes 0 0 1 By MS/MS 2 0 2 2 87.978 79.848 3;4 3.8011E-08 103846 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.405 70.261 89803000 89803000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59382 2146 53396 501540;501541 397753;397754 397754 2 WDDSGNDIIVLAK Unmodified 1444.7198 0.71980898 1340;1200 P35221;P26232 CTNNA1;CTNNA2 Catenin alpha-1;Catenin alpha-2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79.829 78.852 2 0.0006406 91445 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 74.841 65.186 249540000 14716000 54134000 4630800 6445700 6173400 20964000 7282500 18718000 12020000 19652000 15274000 18380000 11051000 11069000 29027000 59383 1340;1200 53397 501542;501543;501544;501545;501546;501547;501548;501549;501550;501551;501552;501553;501554;501555;501556 397755;397756;397757;397758;397759;397760;397761;397762;397763;397764;397765;397766 397762 10 WDEALQLTPNDATLYEMK Unmodified 2137.0038 0.003771334 2953 Q6PID6 TTC33 Tetratricopeptide repeat protein 33 yes yes 0 0 0 By MS/MS 2 0 1 1 90.979 86.083 2 1.8718E-54 106903 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 186.51 149.66 28885000 0 28885000 0 0 0 0 0 0 0 0 0 0 0 0 0 59384 2953 53398 501557 397767 397767 1 WDEMNILATYHPADK Oxidation (M) 1818.8247 0.82468476 1437 P41236 PPP1R2 Protein phosphatase inhibitor 2 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 77.008 73.239 3 0.00038433 91483 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.648 60.104 244320000 0 212640000 31679000 0 0 0 0 0 0 0 0 0 0 0 0 59385 1437 53399 501558;501559 397768;397769 397768 2262 2 WDEMNILATYHPADK Unmodified 1802.8298 0.82977013 1437 P41236 PPP1R2 Protein phosphatase inhibitor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 82.753 80.418 3 0.010039 100184 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 39.517 34.046 85002000 0 58469000 5881400 0 0 0 0 0 0 0 0 0 0 0 20652000 59386 1437 53399 501560;501561;501562 397770;397771 397770 2 WDEQTSNTK Unmodified 1107.4833 0.4832671 323 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 yes yes 0 0 0 By MS/MS 2 0 1 1 13.312 10.018 2 0.032081 13482 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.465 55.051 7517600 0 7517600 0 0 0 0 0 0 0 0 0 0 0 0 0 59387 323 53400 501563 397772 397772 1 WDEYGEIIKPEDFLVPELQATEEEK Unmodified 3006.4386 0.43861491 4818 Q9P2I0 CPSF2 Cleavage and polyadenylation specificity factor subunit 2 yes yes 0 0 1 By MS/MS 2 0 1 1 98.068 89.937 3 1.5841E-12 116055 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 78.645 73.277 40282000 40282000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59388 4818 53401 501564 397773 397773 1 WDGEGSMYVPEDLLPVYK Oxidation (M) 2112.9714 0.97140857 181 O00764 PDXK Pyridoxal kinase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 92.223 87.539 2 1.1813E-07 109631 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.591 87.862 109870000 8269400 97401000 4198400 0 0 0 0 0 0 0 0 0 0 0 0 59389 181 53402 501565;501566;501567;501568 397774;397775;397776 397774 251 3 WDGEGSMYVPEDLLPVYK Unmodified 2096.9765 0.97649395 181 O00764 PDXK Pyridoxal kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 95.762 91.086 2 6.316E-20 113806 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.01 110.71 140730000 15283000 122530000 2922400 0 0 0 0 0 0 0 0 0 0 0 0 59390 181 53402 501569;501570;501571;501572 397777;397778;397779;397780 397777 4 WDLGLNK Unmodified 844.4443 0.44430282 3683 Q92900 UPF1 Regulator of nonsense transcripts 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 62.991 63.043 2 0.027575 71208 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 77.374 51.816 98698000 0 0 0 9047300 5299000 7845900 5885500 7054700 5910600 10000000 8699500 14343000 10744000 13868000 0 59391 3683 53403 501573;501574;501575;501576;501577;501578;501579;501580;501581;501582;501583 397781 397781 1 WDLSAQQIEER Unmodified 1373.6575 0.65754307 1704 P52888 THOP1 Thimet oligopeptidase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 67.965 68.31 2 0.00032861 77638 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.015 85.109 33154000 0 0 0 0 0 0 0 0 0 0 6213800 5544600 0 3778400 17617000 59392 1704 53404 501584;501585;501586;501587 397782;397783;397784;397785;397786 397782 5 WDPTANEDPEWILVEK Unmodified 1940.9156 0.91560825 2400 Q14257 RCN2 Reticulocalbin-2 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 87.399 87.572 2 0.0012073 101312 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.11 53.745 9202300 0 0 0 0 0 0 0 2192100 0 0 0 0 0 0 7010200 59393 2400 53405 501588;501589 397787 397787 1 WDPTGNLLASCSDDMTLK Oxidation (M) 2038.8976 0.8975917 4270 Q9BZK7 TBL1XR1 F-box-like/WD repeat-containing protein TBL1XR1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 80.097 79.259 2 3.3587E-53 97029 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 144.8 132.44 202110000 0 153950000 0 0 4214700 6095200 3160200 0 0 0 0 11032000 6130600 9050200 8478500 59394 4270 53406 501590;501591;501592;501593;501594;501595;501596;501597;501598 397788;397789;397790;397791 397788 5728 4 WDPTGNLLASCSDDMTLK Unmodified 2022.9027 0.90267708 4270 Q9BZK7 TBL1XR1 F-box-like/WD repeat-containing protein TBL1XR1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 86.902 83.403 2 1.7921E-73 103412 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 214.65 206.14 212830000 0 210410000 2422000 0 0 0 0 0 0 0 0 0 0 0 0 59395 4270 53406 501599;501600;501601 397792;397793 397792 2 WDQTADQTPGATPK Unmodified 1514.7001 0.70013617 516 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 0 By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 32.944 33.104 2 8.7039E-33 35396 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 196.48 173.74 141840000 0 0 0 10091000 10218000 0 0 13379000 8332900 15396000 19944000 0 20070000 16839000 27569000 59396 516 53407 501602;501603;501604;501605;501606;501607;501608;501609;501610 397794;397795;397796;397797 397794 4 WDTERVFEVNASNLEK Unmodified 1935.9327 0.9326553 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS By MS/MS 6 4 1 1 1 1 79.937 76.004 3 0.00031143 97590 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.826 45.888 79015000 65501000 0 0 0 0 0 0 0 0 0 0 0 0 0 13514000 59397 4819 53408 501611;501612 397798;397799 397799 2 WDTGENPIYK Unmodified 1221.5666 0.5666028 813 P05556 ITGB1 Integrin beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 53.281 53.716 2 0.017731 60467 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.794 31.399 42303000 0 0 0 0 0 0 0 8242000 0 0 0 10139000 11495000 0 12428000 59398 813 53409 501613;501614;501615;501616;501617 397800;397801;397802;397803 397802 4 WDVSTTK Unmodified 835.40758 0.40758296 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 31.245 27.42 2 0.043702 35778 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.116 58.417 1219600000 0 1203300000 16258000 0 0 0 0 0 0 0 0 0 0 0 0 59399 848 53410 501618;501619 397804 397804 1 WDVTVLELSYHK Unmodified 1488.7613 0.76127986 2916 Q6P1J9 CDC73 Parafibromin yes yes 0 0 0 By MS/MS 2 0 1 1 89.407 81.277 3 0.0073908 105561 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.555 45.934 14252000 14252000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59400 2916 53411 501620 397805 397805 1 WDYLTQVEK Unmodified 1180.5764 0.57643921 4497 Q9HB71 CACYBP Calcyclin-binding protein yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 10 2 1 1 1 1 1 1 1 1 67.253 67.215 2 0.0060063 76988 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 76.221 57.156 236950000 0 0 0 17166000 9113700 40588000 16751000 13012000 13128000 0 30092000 0 0 31069000 66026000 59401 4497 53412 501621;501622;501623;501624;501625;501626;501627;501628;501629;501630 397806;397807;397808 397806 3 WDYSATEEGMK Oxidation (M) 1331.534 0.53398204 4954 Q9UK59 DBR1 Lariat debranching enzyme yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 38.227 38.406 2 0.017301 42195 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 40.331 34.773 20228000 0 0 0 0 1979400 2071100 2014600 0 1973800 0 3944700 4933100 0 3311900 0 59402 4954 53413 501631;501632;501633;501634;501635;501636;501637 397809 397809 6302 1 WEAAEGLLQEALDK Unmodified 1571.7831 0.78313752 190 O14579 COPE Coatomer subunit epsilon yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 88.617 88.737 2 0.0079655 103070 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.087 42.424 8679300 0 0 0 0 0 0 0 0 0 1755800 0 0 0 2366500 4557000 59403 190 53414 501638;501639;501640 397810 397810 1 WEAEPVYVQR Unmodified 1275.6248 0.62478638 1185 P25311 AZGP1 Zinc-alpha-2-glycoprotein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 57.499 57.579 2 0.0017601 65385 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 88.819 73.157 445850000 0 0 0 103230000 16403000 43281000 17474000 23727000 22542000 46434000 47158000 0 37189000 42834000 45579000 59404 1185 53415 501641;501642;501643;501644;501645;501646;501647;501648;501649;501650;501651 397811;397812;397813;397814;397815;397816;397817 397813 7 WEAEPVYVQRAK Unmodified 1474.7569 0.75686319 1185 P25311 AZGP1 Zinc-alpha-2-glycoprotein yes yes 0 0 1 By MS/MS 2 0 1 1 58.203 49.998 3 0.035267 68163 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.616 32.705 5216700 5216700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59405 1185 53416 501652 397818 397818 1 WEAFGLR Unmodified 877.44464 0.44463717 4641 Q9NU22 MDN1 Midasin yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 70.426 70.582 2 0.040879 80379 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.398 53.985 20369000 0 0 0 0 1408300 0 2765400 0 0 0 2710000 3652800 2984400 2417500 4431000 59406 4641 53417 501653;501654;501655;501656;501657;501658;501659 397819 397819 1 WEAYLGLLQAEYTEGDALDALGLK Unmodified 2638.3166 0.31664928 1922 P62875 POLR2L DNA-directed RNA polymerases I, II, and III subunit RPABC5 yes yes 0 0 0 By MS/MS 2 0 1 1 101.1 92.967 3 2.3079E-07 119730 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.871 63.067 5500400 5500400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59407 1922 53418 501660 397820 397820 1 WEDAIPLALK Unmodified 1154.6336 0.63356015 896 P09960 LTA4H Leukotriene A-4 hydrolase yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 87.214 83.576 2 0.034134 103954 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.812 51.409 199220000 0 193590000 5627500 0 0 0 0 0 0 0 0 0 0 0 0 59408 896 53419 501661;501662 397821 397821 1 WEDAQITLLK Unmodified 1215.6499 0.6499385 428 O60749 SNX2 Sorting nexin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 77.619 77.67 2 0.0042579 89705 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 85.676 70.894 109180000 0 0 0 5146000 6727400 12167000 5818700 10423000 6371400 11758000 10240000 13520000 7151100 0 19860000 59409 428 53420 501663;501664;501665;501666;501667;501668;501669;501670;501671;501672;501673;501674 397822;397823;397824;397825;397826;397827;397828;397829 397823 8 WEESGPQFITNSEEVR Unmodified 1906.8697 0.86972069 2261 Q13257 MAD2L1 Mitotic spindle assembly checkpoint protein MAD2A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.926 72.989 2 3.5502E-36 83439 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 156.69 151.08 155480000 0 0 0 4576300 4874500 17179000 4987200 9743900 7856400 16603000 17989000 14521000 10660000 10916000 35567000 59410 2261 53421 501675;501676;501677;501678;501679;501680;501681;501682;501683;501684;501685;501686 397830;397831;397832;397833;397834;397835;397836;397837;397838;397839;397840;397841;397842 397833 13 WEGLVYAPPGK Unmodified 1215.6288 0.62880913 5122 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 72.325 71.63 2 0.0015723 87343 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 87.639 58.263 237240000 0 28244000 2539500 8153900 10486000 11590000 9875100 12360000 9506400 16386000 28461000 24685000 26726000 23848000 24383000 59411 5122 53422 501687;501688;501689;501690;501691;501692;501693;501694;501695;501696;501697;501698;501699;501700;501701 397843;397844;397845;397846;397847;397848;397849;397850;397851;397852;397853;397854;397855;397856;397857 397852 12 WEGNYLFPR Unmodified 1180.5665 0.56654322 4188 Q9BVI4 NOC4L Nucleolar complex protein 4 homolog yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 76.797 76.984 2 0.024626 88097 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 75.854 66.64 12491000 0 0 0 0 0 0 1170900 2334800 2683700 0 2275400 4026300 0 0 0 59412 4188 53423 501702;501703;501704;501705;501706;501707;501708 397858;397859;397860 397860 3 WELLQQVDTSTR Unmodified 1474.7416 0.74160705 780 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.69 1.54 3 75 1 1 1 8 5 4 4 25 6 3 4 4 5 4 3 78.639 78.676 2;3 4.9554E-157 87709 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 229.53 205.24 + 32510000000 2602600 1445200 645020 2966900000 1315600000 2645800000 1094600000 8807700000 1750400000 2934900000 1938300000 3737100000 2587500000 1288400000 1438200000 59413 780 53424 501709;501710;501711;501712;501713;501714;501715;501716;501717;501718;501719;501720;501721;501722;501723;501724;501725;501726;501727;501728;501729;501730;501731;501732;501733;501734;501735;501736;501737;501738;501739;501740;501741;501742;501743;501744;501745;501746;501747;501748;501749;501750;501751;501752;501753;501754;501755;501756;501757;501758;501759;501760;501761;501762;501763;501764;501765;501766;501767;501768;501769;501770;501771;501772;501773;501774;501775;501776;501777;501778;501779;501780;501781;501782;501783;501784;501785;501786 397861;397862;397863;397864;397865;397866;397867;397868;397869;397870;397871;397872;397873;397874;397875;397876;397877;397878;397879;397880;397881;397882;397883;397884;397885;397886;397887;397888;397889;397890;397891;397892;397893;397894;397895;397896;397897;397898;397899;397900;397901;397902;397903;397904;397905;397906;397907;397908;397909;397910;397911;397912;397913;397914;397915;397916;397917;397918;397919;397920;397921;397922;397923;397924;397925;397926;397927;397928;397929;397930;397931;397932;397933;397934;397935;397936;397937;397938;397939;397940;397941;397942;397943;397944;397945;397946;397947;397948;397949;397950;397951;397952 397867 80 WELNSGDGAFYGPK Unmodified 1539.6994 0.69940789 1209 P26639 TARS Threonine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.16 3.73 5 2 12 2 3 2 1 1 1 1 1 1 1 1 1 1 1 1 75.99 74.275 2 4.5585E-52 90581 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 186.87 178.57 2736900000 115220000 2135400000 89104000 4494700 4727900 8113700 5293100 7811500 7204700 10167000 61015000 45766000 8100200 39592000 194890000 59414 1209 53425 501787;501788;501789;501790;501791;501792;501793;501794;501795;501796;501797;501798;501799;501800;501801;501802;501803;501804;501805 397953;397954;397955;397956;397957;397958;397959;397960;397961;397962;397963;397964;397965;397966;397967;397968;397969;397970;397971 397966 19 WELYIPPK Unmodified 1044.5644 0.56441796 2101 Q04446 GBE1 1,4-alpha-glucan-branching enzyme yes yes 0 0 0 By MS/MS 2 0 1 1 84.075 79.355 2 0.026272 98636 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.451 67.244 15210000 0 15210000 0 0 0 0 0 0 0 0 0 0 0 0 0 59415 2101 53426 501806 397972 397972 1 WENGECAQK Unmodified 1120.4608 0.46075752 63 CON__P02754 yes yes 0 0 0 By matching By MS/MS By matching 10 0 3 1 1 1 11.718 11.82 2 0.014092 10588 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 58.815 48.736 + 7730800 0 0 0 0 1131900 0 5873300 0 0 0 725600 0 0 0 0 59416 63 53427 501807;501808;501809 397973 397973 1 WEQIEGNSK Unmodified 1089.5091 0.50908792 2177 Q10471 GALNT2 Polypeptide N-acetylgalactosaminyltransferase 2;Polypeptide N-acetylgalactosaminyltransferase 2 soluble form yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 26.549 26.777 2 0.0035091 28700 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 107.57 77.768 72760000 0 0 0 0 5031300 7978900 7496400 6060000 6124600 6600300 7635800 8292600 0 6756500 10783000 59417 2177 53428 501810;501811;501812;501813;501814;501815;501816;501817;501818;501819 397974;397975;397976;397977;397978;397979;397980 397976 7 WEQQLQEEQEQK Unmodified 1601.7322 0.73216458 3573 Q8WWI1 LMO7 LIM domain only protein 7 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 36.168 35.191 2 8.6516E-66 43891 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 219.5 187.09 81846000 0 42941000 0 0 4363000 0 0 0 5077900 0 0 7163500 8051800 5541000 8707600 59418 3573 53429 501820;501821;501822;501823;501824;501825;501826;501827;501828 397981;397982;397983;397984;397985;397986;397987 397982 6 WEQVPLIK Unmodified 1011.5753 0.57531699 1170 P23919 DTYMK Thymidylate kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.988 72.057 2 0.01579 81962 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 68.312 53.376 62585000 0 0 0 4550300 2975600 8804600 3715000 3555000 2598300 5069500 4504000 6035400 4439200 4243100 12095000 59419 1170 53430 501829;501830;501831;501832;501833;501834;501835;501836;501837;501838;501839;501840 397988;397989;397990 397990 3 WERLTVADALEPVQFEDGEK Unmodified 2331.1383 0.13829098 1299 P31321 PRKAR1B cAMP-dependent protein kinase type I-beta regulatory subunit yes yes 0 0 1 By MS/MS 2 0 1 1 91.214 83.084 3 2.2939E-08 107837 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.66 70.209 26073000 26073000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59420 1299 53431 501841 397991 397991 1 WERLTVADALEPVQFEDGQK Unmodified 2330.1543 0.1542754 927 P10644 PRKAR1A cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS 2.67 0.471 1 2 2 1 89.326 84.356 3 1.8048E-17 107434 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.49 89.833 52632000 50454000 2177800 0 0 0 0 0 0 0 0 0 0 0 0 0 59421 927 53432 501842;501843;501844 397992;397993 397993 2 WESGSLLEREEK Unmodified 1461.71 0.70997257 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.864 49.023 3 1.6237E-05 55403 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 92.19 69.469 255810000 0 0 0 6715600 6897300 22487000 13509000 14743000 19320000 24675000 24648000 34327000 32360000 25911000 30216000 59422 213 53433 501845;501846;501847;501848;501849;501850;501851;501852;501853;501854;501855;501856 397994;397995;397996;397997;397998;397999;398000;398001;398002;398003;398004 398002 11 WETFCTSSLGETNK Unmodified 1658.7246 0.72463636 2727 Q5H9R7 PPP6R3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 66.76 67.05 2 0.023376 76052 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 34.386 19.966 12380000 0 0 0 0 0 0 0 0 0 0 0 0 3444400 2640500 6295100 59423 2727 53434 501857;501858;501859 398005 398005 1 WETLNDAGFTTANNIANLK Unmodified 2092.0225 0.022532941 4202 Q9BW66 CINP Cyclin-dependent kinase 2-interacting protein yes yes 0 0 0 By MS/MS 2 0 1 1 88.417 83.575 2 3.2236E-31 103931 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 145.71 126.13 20730000 0 20730000 0 0 0 0 0 0 0 0 0 0 0 0 0 59424 4202 53435 501860 398006 398006 1 WEWLVNQHR Unmodified 1266.6258 0.62578944 4212 Q9BWJ5 SF3B5 Splicing factor 3B subunit 5 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 67.6 67.914 3 0.024751 76872 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.753 37.491 20339000 0 0 0 0 0 0 0 0 0 0 0 3237800 2837200 3973300 10291000 59425 4212 53436 501861;501862;501863;501864 398007 398007 1 WEYENELSK Unmodified 1196.535 0.53496832 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 52.449 52.51 2 0.034699 59491 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 55.112 37.726 26721000 0 0 0 5781800 3018500 0 0 6793000 0 0 2969300 3614400 4543400 0 0 59426 1029 53437 501865;501866;501867;501868;501869;501870 398008 398008 1 WFEENASQSTVK Unmodified 1424.6572 0.65720872 2206 Q12905 ILF2 Interleukin enhancer-binding factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.241 47.406 2 1.8263E-11 52121 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 150.61 120.04 342370000 0 0 0 16161000 18561000 27170000 17250000 22998000 14280000 42353000 31807000 23658000 31648000 33005000 63479000 59427 2206 53438 501871;501872;501873;501874;501875;501876;501877;501878;501879;501880;501881;501882 398009;398010;398011;398012;398013;398014;398015;398016;398017;398018;398019;398020;398021 398012 13 WFLDALEK Unmodified 1020.528 0.52803245 2226 Q13042 CDC16 Cell division cycle protein 16 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 90.439 85.277 2 0.031244 108256 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.213 46.79 37796000 24444000 11279000 2072500 0 0 0 0 0 0 0 0 0 0 0 0 59428 2226 53439 501883;501884;501885 398022;398023 398023 2 WFSESGK Unmodified 839.38137 0.38136821 2557 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog yes yes 0 0 0 By matching By MS/MS By MS/MS 2 0 3 1 1 1 34.863 30.033 2 0.031699 39479 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.35 69.395 564570000 100290000 406300000 57985000 0 0 0 0 0 0 0 0 0 0 0 0 59429 2557 53440 501886;501887;501888 398024 398024 1 WFSTPLLLEASEFLAEDSQEK Unmodified 2439.1846 0.18457247 4751 Q9NYU2 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 102.88 97.409 3 0.002753 118339 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 36.805 29.528 17488000 12708000 4780800 0 0 0 0 0 0 0 0 0 0 0 0 0 59430 4751 53441 501889;501890;501891 398025;398026 398025 2 WGASTATTQK Unmodified 1049.5142 0.5141733 4976 Q9UKV3 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 19.762 19.97 2 0.009563 20656 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 57.55 39.225 85917000 0 0 0 5209200 5374900 4143900 9128300 5621100 0 7302600 7818300 12718000 9238500 9453000 9908500 59431 4976 53442 501892;501893;501894;501895;501896;501897;501898;501899;501900;501901;501902 398027 398027 1 WGDAGAEYVVESTGVFTTMEK Oxidation (M) 2292.0256 0.025628988 782 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.23 0.461 1 39 13 24 22 7 95.404 90.42 2;3 1.4116E-91 114569 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 160.79 153.35 10247000000 7457700000 2143600000 645630000 0 0 0 0 0 0 0 0 0 0 0 0 59432 782 53443 501903;501904;501905;501906;501907;501908;501909;501910;501911;501912;501913;501914;501915;501916;501917;501918;501919;501920;501921;501922;501923;501924;501925;501926;501927;501928;501929;501930;501931;501932;501933;501934;501935;501936;501937;501938;501939;501940;501941;501942;501943;501944;501945;501946;501947;501948;501949;501950;501951;501952;501953;501954;501955 398028;398029;398030;398031;398032;398033;398034;398035;398036;398037;398038;398039;398040;398041;398042;398043;398044;398045;398046;398047;398048;398049;398050;398051;398052;398053;398054;398055;398056;398057;398058;398059;398060;398061;398062;398063;398064;398065;398066;398067;398068;398069;398070;398071;398072;398073;398074;398075;398076;398077;398078;398079;398080;398081;398082;398083;398084;398085;398086;398087;398088;398089;398090;398091;398092;398093;398094;398095;398096;398097;398098;398099;398100;398101;398102;398103;398104;398105;398106;398107;398108;398109;398110;398111;398112;398113;398114;398115;398116;398117;398118 398039 948 82 WGDAGAEYVVESTGVFTTMEK Unmodified 2276.0307 0.030714366 782 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.11 0.434 3 52 10 27 27 11 99.082 94.363 2;3 2.2877E-181 113076 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 288 275.12 14325000000 11504000000 2344000000 477200000 0 0 0 0 0 0 0 0 0 0 0 0 59433 782 53443 501956;501957;501958;501959;501960;501961;501962;501963;501964;501965;501966;501967;501968;501969;501970;501971;501972;501973;501974;501975;501976;501977;501978;501979;501980;501981;501982;501983;501984;501985;501986;501987;501988;501989;501990;501991;501992;501993;501994;501995;501996;501997;501998;501999;502000;502001;502002;502003;502004;502005;502006;502007;502008;502009;502010;502011;502012;502013;502014;502015;502016;502017;502018;502019;502020 398119;398120;398121;398122;398123;398124;398125;398126;398127;398128;398129;398130;398131;398132;398133;398134;398135;398136;398137;398138;398139;398140;398141;398142;398143;398144;398145;398146;398147;398148;398149;398150;398151;398152;398153;398154;398155;398156;398157;398158;398159;398160;398161;398162;398163;398164;398165;398166;398167;398168;398169;398170;398171;398172;398173;398174;398175;398176;398177;398178;398179;398180;398181;398182;398183;398184;398185;398186;398187;398188;398189;398190;398191;398192;398193;398194;398195;398196;398197;398198;398199;398200;398201 398128 77 WGDEHIPGSPYR Unmodified 1412.6473 0.64731274 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 53.426 53.738 3 0.011505 60310 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.684 33.959 84162000 0 0 0 0 0 0 0 4118800 10889000 12373000 11987000 0 0 0 44794000 59434 1124 53444 502021;502022;502023;502024;502025 398202;398203 398203 2 WGDEHIPGSPYRVVVP Unmodified 1806.9053 0.90531834 1124 P21333 FLNA Filamin-A yes yes 0 0 1 By MS/MS 2 0 1 1 86.209 78.079 3 0.01733 102494 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 36.638 32.322 330240000 330240000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59435 1124 53445 502026 398204 398204 1 WGDEVEYMLVSFDHENK Unmodified 2096.915 0.91495633 1540 P48506 GCLC Glutamate--cysteine ligase catalytic subunit yes yes 0 0 0 By MS/MS 2 0 1 1 96.931 88.8 3 0.0017763 114769 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.798 48.409 19574000 19574000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59436 1540 53446 502027 398205;398206 398206 2 WGDIEFPPPFGR Unmodified 1416.6826 0.68263561 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 2 1 1 1 1 91.587 91.704 2 1.5546E-05 106009 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 112.75 98.541 73966000 0 0 0 0 1926700 4965600 5244100 22836000 22394000 4568600 4700400 4770000 0 0 2560900 59437 1714 53447 502028;502029;502030;502031;502032;502033;502034;502035;502036;502037 398207;398208;398209;398210;398211;398212;398213;398214;398215;398216;398217;398218;398219;398220;398221 398214 15 WGDIEFPPPFGREAYPEEAYIADLDAK Unmodified 3095.4553 0.45526802 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 1 By MS/MS By MS/MS 3 0 2 1 1 97.531 94.121 3 0.019941 112925 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 22.096 19.72 9880600 6120900 3759700 0 0 0 0 0 0 0 0 0 0 0 0 0 59438 1714 53448 502038;502039 398222 398222 1 WGDYDSHDIER Unmodified 1391.5742 0.57420737 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.712 40.89 3 0.025395 45585 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 36.847 36.352 136740000 0 0 0 5738800 4485300 11226000 6870400 7925300 5740300 12911000 9872600 19558000 10839000 10302000 31272000 59439 2930 53449 502040;502041;502042;502043;502044;502045;502046;502047;502048;502049;502050;502051 398223;398224;398225 398223 2 WGEEEAELNK Unmodified 1203.5408 0.54078198 1579 P49589 CARS Cysteine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.36 2.01 1 10 1 1 1 1 1 1 1 1 1 1 1 40.998 40.788 2 0.0027303 48801 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 119.21 107.7 90801000 0 23048000 0 0 2600900 3871000 4022300 0 3028500 7322500 8130900 8114400 5640600 8269500 16752000 59440 1579 53450 502052;502053;502054;502055;502056;502057;502058;502059;502060;502061;502062 398226;398227;398228;398229;398230;398231;398232;398233 398230 8 WGEEHIPGSPFHVTVP Unmodified 1787.8631 0.86311917 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 90.267 83.754 3 0.0039294 106083 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 36.392 25.758 83558000 37039000 46519000 0 0 0 0 0 0 0 0 0 0 0 0 0 59441 487 53451 502063;502064 398234;398235 398234 2 WGGNPLQPPTTPSPEPEPEPDGR Unmodified 2454.1452 0.14516727 1146 P22735 TGM1 Protein-glutamine gamma-glutamyltransferase K yes yes 0 0 0 By MS/MS 10 0 1 1 76.007 75.486 3 0.0026545 87554 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 29.058 25.723 2639900 0 0 0 2639900 0 0 0 0 0 0 0 0 0 0 0 59442 1146 53452 502065 398236 398236 1 WGGQEYSVTTLSEDDTVLDLK Unmodified 2355.1118 0.11180146 3568 Q8WVY7 UBLCP1 Ubiquitin-like domain-containing CTD phosphatase 1 yes yes 0 0 0 By MS/MS 2 0 1 1 91.846 83.716 2 8.6842E-72 108555 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 172.91 165.71 19621000 19621000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59443 3568 53453 502066 398237 398237 1 WGLGLDDEGSSQGEPQSK Unmodified 1888.8439 0.84389987 3662 Q92793 CREBBP CREB-binding protein yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 65.959 66.113 2 1.6025E-11 75896 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 114.82 101.15 38532000 0 0 0 0 2528000 4067000 3466600 0 3075400 0 8660800 7614900 0 3179100 5940100 59444 3662 53454 502067;502068;502069;502070;502071;502072;502073;502074;502075;502076 398238;398239;398240;398241;398242;398243;398244;398245 398238 8 WGNNNRDNNNSNNR Unmodified 1687.716 0.71595444 4162 Q9BUJ2 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.233 6.3535 3 2.2459E-05 3603 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.457 74.187 88276000 0 0 0 6904200 6254100 5687600 7175200 5534600 5870700 6081700 9879800 7665600 7111600 6291500 13820000 59445 4162 53455 502077;502078;502079;502080;502081;502082;502083;502084;502085;502086;502087;502088 398246;398247;398248;398249;398250;398251;398252;398253;398254;398255;398256 398249 11 WGQPPSPTPVPRPPDADPNTPSPK Unmodified 2534.2554 0.25538642 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.973 66.056 3 3.3774E-08 75885 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 54.223 47.029 111130000 0 0 0 4367400 5459300 11504000 7019500 7888300 7782900 9430500 10685000 11041000 10031000 9194200 16724000 59446 2451 53456 502089;502090;502091;502092;502093;502094;502095;502096;502097;502098;502099;502100 398257;398258;398259;398260;398261;398262;398263;398264;398265;398266;398267;398268;398269;398270;398271;398272;398273;398274 398274 18 WGRDDIENIAREVEGK Unmodified 1885.9282 0.92823863 389 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes yes 0 0 2 By MS/MS 2 0 1 1 86.118 77.988 4 0.014321 101664 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 31.876 24.817 9733400 9733400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59447 389 53457 502101 398275 398275 1 WGSNELPAEEGK Unmodified 1315.6044 0.60444487 1041 P16615 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 45.694 45.611 2 0.0085934 51816 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 48.741 31.51 29531000 0 0 0 6965500 4939900 0 3990000 7217400 0 0 6418100 0 0 0 0 59448 1041 53458 502102;502103;502104;502105;502106;502107;502108 398276;398277;398278;398279 398279 4 WGTLTDCVVMRDPQTK Unmodified 1905.9077 0.90770288 1679 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 70.157 69.449 3 4.3243E-06 79066 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.346 70.746 103250000 37618000 0 0 1851000 0 3896500 0 2528300 0 3980500 6790900 10847000 4375700 6760700 24604000 59449 1679 53459 502109;502110;502111;502112;502113;502114;502115;502116;502117;502118 398280;398281;398282;398283;398284;398285;398286 398280 6 WGTLTDCVVMRDPQTK Oxidation (M) 1921.9026 0.9026175 1679 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 yes yes 0 1 1 By MS/MS 10 0 1 1 59.174 59.376 3 0.0079804 68024 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 43.024 32.828 7513200 0 0 0 0 0 0 0 0 0 0 0 0 7513200 0 0 59450 1679 53459 502119 398287 398287 2689 0 WGTPVPLEGFEDK Unmodified 1473.714 0.71399532 1779 P56192 MARS Methionine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 84.009 82.892 2 9.0471E-10 102983 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.13 113.83 1163100000 58418000 882620000 27838000 2525000 5152900 15584000 4865800 12424000 6874800 17854000 18116000 17248000 10784000 22804000 60012000 59451 1779 53460 502120;502121;502122;502123;502124;502125;502126;502127;502128;502129;502130;502131;502132;502133;502134;502135 398288;398289;398290;398291;398292;398293;398294;398295;398296;398297;398298;398299;398300;398301;398302;398303;398304 398291 17 WHCYLHVNQKYLGTPEEK Unmodified 2301.1001 0.10007176 970 P12757 SKIL Ski-like protein yes yes 0 0 1 By MS/MS 2 0 1 1 90.823 82.692 3 0.010139 107297 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 26.474 10.175 14694000 14694000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59452 970 53461 502136 398305 398305 1 WHGDVAVK Unmodified 910.4661 0.4661009 769;919;1011 P10398;P04049;P15056 ARAF;RAF1;BRAF Serine/threonine-protein kinase A-Raf;RAF proto-oncogene serine/threonine-protein kinase;Serine/threonine-protein kinase B-raf no no 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 27.995 23.681 2 0.026272 33693 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.451 12.457 47828000 35994000 0 11834000 0 0 0 0 0 0 0 0 0 0 0 0 59453 919;769;1011 53462 502137;502138 398306;398307 398306 2 WHLEQQQAIQTTEAEK Unmodified 1938.9436 0.94355434 4890 Q9UH65 SWAP70 Switch-associated protein 70 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 4.67 3.77 6 3 2 2 2 1 1 1 56.737 52.778 2;3 4.0852E-45 68408 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 155.14 134.72 240450000 68825000 91690000 53218000 3187400 0 0 0 0 0 0 0 0 0 5676500 17851000 59454 4890 53463 502139;502140;502141;502142;502143;502144;502145;502146;502147 398308;398309;398310;398311;398312;398313;398314;398315 398308 8 WHLLSELEAAPYLPQEEK Unmodified 2152.0841 0.084070566 3538 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 yes yes 0 0 0 By MS/MS 3 0 1 1 92.731 89.503 3 0.027101 107168 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 26.146 18.524 1911200 0 1911200 0 0 0 0 0 0 0 0 0 0 0 0 0 59455 3538 53464 502148 398316 398316 1 WIDATSGIYNSEK Unmodified 1482.6991 0.69907354 3573 Q8WWI1 LMO7 LIM domain only protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 64.006 63.035 2 2.059E-36 79177 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 183.03 166 207120000 0 84877000 0 0 0 13194000 12525000 0 6992800 0 18989000 28669000 0 15251000 26626000 59456 3573 53465 502149;502150;502151;502152;502153;502154;502155;502156;502157;502158;502159;502160 398317;398318;398319;398320;398321;398322;398323;398324;398325;398326;398327;398328;398329 398320 13 WIDISLEEIESIDQEIK Unmodified 2059.0361 0.03611732 1971 P78318 IGBP1 Immunoglobulin-binding protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 99.489 91.358 2 3.9995E-05 117805 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 91.62 78.853 4796300 4796300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59457 1971 53466 502161 398330 398330 1 WIDLTMEDIRRMEDETQK Unmodified 2308.0828 0.082766711 1554 P48739 PITPNB Phosphatidylinositol transfer protein beta isoform yes yes 0 0 2 By MS/MS 2 0 1 1 91.035 82.904 4 0.00011302 107556 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.463 41.175 41362000 41362000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59458 1554 53467 502162 398331 398331 1 WIDNPTVDDR Unmodified 1229.5677 0.56766543 1073 P18206 VCL Vinculin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 48.523 48.682 2 0.0063328 53829 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 65.347 49.685 164120000 0 0 0 13115000 4485000 19000000 6581600 0 0 17008000 21250000 17866000 8724500 17046000 39043000 59459 1073 53468 502163;502164;502165;502166;502167;502168;502169;502170;502171;502172 398332;398333;398334 398334 2 WIDNPTVDDRGVGQAAIR Unmodified 1981.997 0.99698689 1073 P18206 VCL Vinculin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 64.555 64.699 3 2.9003E-05 74081 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 65.107 50.412 125640000 0 0 0 5373100 0 12174000 4062200 7012600 4064200 7700000 13767000 13593000 4866700 12476000 40554000 59460 1073 53469 502173;502174;502175;502176;502177;502178;502179;502180;502181;502182;502183 398335;398336;398337;398338;398339;398340;398341;398342;398343;398344;398345;398346 398337 12 WIEETTAQQEMMK Oxidation (M) 1639.7222 0.72219352 5049 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes yes 0 1 0 By MS/MS 2 0 1 1 51.935 46.162 2 0.0069527 59893 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 61.958 47.8 7276600 0 7276600 0 0 0 0 0 0 0 0 0 0 0 0 0 59461 5049 53470 502184 398347 398347 6400 1 WIEQVTGR Unmodified 987.51378 0.51377937 5054 Q9UPQ0 LIMCH1 LIM and calponin homology domains-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 46.238 46.407 2 0.011282 52069 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 77.282 30.912 219240000 0 0 0 14515000 11146000 17531000 14050000 22412000 0 24167000 23517000 25705000 18204000 16020000 31971000 59462 5054 53471 502185;502186;502187;502188;502189;502190;502191;502192;502193;502194;502195 398348;398349;398350;398351;398352;398353;398354 398351 7 WIEQWIK Unmodified 1001.5335 0.53345218 5162 Q9Y3D8 AK6 Adenylate kinase isoenzyme 6 yes yes 0 0 0 By MS/MS 2 0 1 1 85.425 77.294 2 0.034035 100792 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.359 55.786 29334000 29334000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59463 5162 53472 502196 398355 398355 1 WIFVGGKGGVGK Unmodified 1203.6764 0.67642802 353 O43681 ASNA1 ATPase ASNA1 yes yes 0 0 1 By MS/MS 10 0 1 1 6.8332 7.0099 3 0.0408 4961 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 23.226 2.9225 3731700 0 0 0 0 0 0 0 0 0 3731700 0 0 0 0 0 59464 353 53473 502197 398356 398356 1 WIGLDLSNGK Unmodified 1101.5819 0.58185893 1067 P17987 TCP1 T-complex protein 1 subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.12 3.89 3 1 4 1 2 1 1 1 1 1 79.42 76.213 2 7.2705E-06 95157 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.29 102.69 638910000 336050000 198620000 66113000 4723700 0 33403000 0 0 0 0 0 0 0 0 0 59465 1067 53474 502198;502199;502200;502201;502202;502203;502204;502205 398357;398358;398359;398360;398361;398362;398363;398364 398359 8 WIGLDLSNGKPR Unmodified 1354.7357 0.73573382 1067 P17987 TCP1 T-complex protein 1 subunit alpha yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 69.866 70.067 3 8.206E-05 79631 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.338 81.17 68729000 0 0 0 0 0 4572200 4362700 4265900 1160700 6626900 8277400 9859700 6010000 5489800 18104000 59466 1067 53475 502206;502207;502208;502209;502210;502211;502212;502213;502214;502215 398365;398366;398367;398368;398369;398370;398371;398372;398373;398374;398375 398370 10 WIIQADTLLDESEK Unmodified 1659.8356 0.83556702 952 P11532 DMD Dystrophin yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 35.333 30.465 3 0.0087581 42385 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 32.068 7.1324 31423000 28139000 0 3283600 0 0 0 0 0 0 0 0 0 0 0 0 59467 952 53476 502216;502217 398376 398376 1 WINATDPSAR Unmodified 1129.5516 0.55162144 864 P08243 ASNS Asparagine synthetase [glutamine-hydrolyzing] yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 40.713 41.094 2 0.0017421 44740 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.948 72.745 129680000 0 0 0 0 0 21329000 0 11825000 0 15847000 21817000 20593000 10819000 0 27450000 59468 864 53477 502218;502219;502220;502221;502222;502223;502224 398377;398378;398379;398380;398381;398382 398378 2 WISDWNLTTEK Unmodified 1391.6721 0.67213051 3046 Q7L2H7 EIF3M Eukaryotic translation initiation factor 3 subunit M yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 79.759 78.981 2 0.0073158 91194 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.627 56.672 112010000 25243000 0 0 0 0 10897000 3756600 0 4860500 15715000 7920800 8063300 8739900 0 26812000 59469 3046 53478 502225;502226;502227;502228;502229;502230;502231;502232;502233 398383;398384 398383 2 WISIMTER Unmodified 1034.5219 0.52190122 840 P07355;A6NMY6 ANXA2;ANXA2P2 Annexin A2;Putative annexin A2-like protein yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 71.988 72.059 2 0.013245 82556 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 72.789 54.465 176360000 0 0 0 31441000 4183300 10631000 8093600 15242000 6816300 10447000 12678000 20329000 10577000 10713000 35207000 59470 840 53479 502234;502235;502236;502237;502238;502239;502240;502241;502242;502243;502244;502245 398385 398385 1 WKPGSLASHVK Unmodified 1208.6666 0.66659162 822 P06493 CDK1 Cyclin-dependent kinase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 34.64 34.944 3 0.0084917 38511 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 47.361 35.125 551160000 0 0 0 0 0 96459000 19212000 34651000 63331000 23836000 28930000 65023000 0 38772000 180950000 59471 822 53480 502246;502247;502248;502249;502250;502251;502252;502253;502254 398386 398386 1 WKPPQGTDSIK Unmodified 1255.6561 0.65608651 4912 Q9UHX1 PUF60 Poly(U)-binding-splicing factor PUF60 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40.284 39.346 3 0.0034429 44120 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 83.182 68.516 2116000000 754700000 17436000 71905000 76191000 65236000 71923000 85396000 89450000 73053000 123020000 108240000 129310000 126250000 133960000 189920000 59472 4912 53481 502255;502256;502257;502258;502259;502260;502261;502262;502263;502264;502265;502266;502267;502268;502269 398387;398388;398389;398390;398391;398392;398393;398394;398395;398396;398397;398398;398399;398400;398401;398402 398402 7 WLAGDVPAAR Unmodified 1054.556 0.55597854 601 O94906 PRPF6 Pre-mRNA-processing factor 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 56.319 56.451 2 0.0052216 64228 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 69.825 47.694 122400000 0 0 0 6771100 7830300 0 7719600 11587000 7204500 10727000 13352000 16087000 13191000 13879000 14054000 59473 601 53482 502270;502271;502272;502273;502274;502275;502276;502277;502278;502279;502280 398403;398404;398405;398406;398407;398408;398409;398410;398411;398412;398413;398414;398415;398416;398417 398406 15 WLAIDANAR Unmodified 1028.5403 0.54032847 2457 Q14974 KPNB1 Importin subunit beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.254 61.356 2 0.013807 70291 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 59.245 39.609 242570000 0 0 0 8808900 9330500 25944000 15092000 16565000 11724000 26248000 23765000 23516000 17965000 22492000 41124000 59474 2457 53483 502281;502282;502283;502284;502285;502286;502287;502288;502289;502290;502291;502292 398418;398419;398420;398421 398420 4 WLAIDANARR Unmodified 1184.6414 0.6414395 2457 Q14974 KPNB1 Importin subunit beta-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 50.027 50.402 3 0.0013559 57089 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 60.102 50.344 156730000 0 0 0 0 0 18937000 0 0 0 17517000 0 41894000 0 18617000 59766000 59475 2457 53484 502293;502294;502295;502296;502297 398422;398423;398424;398425;398426;398427 398422 4 WLAPDGLIFPDR Unmodified 1398.7296 0.7295858 4069 Q99873 PRMT1 Protein arginine N-methyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 90.114 90.263 2 2.4765E-05 104514 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.24 91.582 16854000 0 0 0 0 0 0 0 0 0 0 2023900 0 0 1872900 12957000 59476 4069 53485 502298;502299;502300 398428;398429;398430;398431 398428 4 WLASAADDHTVK Unmodified 1312.6412 0.64116473 4181 Q9BVA0 KATNB1 Katanin p80 WD40 repeat-containing subunit B1 yes yes 0 0 0 By MS/MS 2 0 1 1 41.455 37.787 3 0.020267 47691 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 39.006 28.034 16386000 0 0 16386000 0 0 0 0 0 0 0 0 0 0 0 0 59477 4181 53486 502301 398432 398432 1 WLCPLSGK Unmodified 959.48987 0.48987281 4230 Q9BXP5 SRRT Serrate RNA effector molecule homolog yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 61.221 61.311 2 0.017183 69080 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 66.073 55.2 51845000 0 0 0 2266600 2337900 4189000 3705400 0 3938900 0 6859700 4830600 8306200 6292100 9118600 59478 4230 53487 502302;502303;502304;502305;502306;502307;502308;502309;502310;502311 398433;398434 398433 2 WLCPSTKPGEK Unmodified 1301.6438 0.64380726 1636 P50748 KNTC1 Kinetochore-associated protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 42.479 35.744 3 0.03526 49233 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 38.58 23.193 9111300 9111300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59479 1636 53488 502312 398435 398435 1 WLDDIGLPQYK Unmodified 1346.6871 0.68705229 3180 Q86W92 PPFIBP1 Liprin-beta-1 no no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 83.887 83.992 2 0.00056282 96921 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.163 73.12 89718000 0 0 0 0 3664800 6994100 4228900 11165000 3790500 9788000 11582000 8156200 4282800 5113900 20952000 59480 3180 53489 502313;502314;502315;502316;502317;502318;502319;502320;502321;502322;502323 398436;398437;398438;398439;398440;398441;398442;398443 398438 8 WLDDLLASPPPSGGGAR Unmodified 1707.858 0.8580338 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 84.16 84.316 2 0.00075632 97343 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.809 61.878 26292000 0 0 0 0 0 0 0 0 0 0 5986700 7681100 0 3436500 9187200 59481 4285 53490 502324;502325;502326;502327 398444;398445;398446 398444 2 WLDGASFDNER Unmodified 1308.5735 0.57347909 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 63.489 63.707 2 0.017282 72167 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.092 38.465 14456000 0 0 0 0 0 2964200 0 0 0 3560000 0 0 0 2812100 5119900 59482 619 53491 502328;502329;502330;502331 398447;398448;398449 398448 3 WLDPENSTNR Unmodified 1230.5629 0.56291441 705 O95905 ECD Protein SGT1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 41.835 42.189 2 0.044287 45995 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.427 27.128 12518000 0 0 0 0 0 4222500 0 0 0 0 0 0 0 2704300 5591100 59483 705 53492 502332;502333;502334 398450 398450 1 WLEVLEK Unmodified 915.50657 0.50656873 4525 Q9HD26 GOPC Golgi-associated PDZ and coiled-coil motif-containing protein yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 71.712 71.902 2 0.04888 82607 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.757 13.185 23003000 0 0 0 0 0 2736300 0 0 0 3308600 2984900 2869600 1740100 2909700 6453900 59484 4525 53493 502335;502336;502337;502338;502339;502340;502341 398451 398451 1 WLFTTEEEILLNDNDLAVTYFFHQAVDDVK Unmodified 3584.7351 0.73513128 3916 Q96L92 SNX27 Sorting nexin-27 yes yes 0 0 0 By MS/MS 2 0 1 1 103.95 95.821 3 0.0020197 123152 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 28.742 23.787 3998800 3998800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59485 3916 53494 502342 398452 398452 1 WLGEQLK Unmodified 872.4756 0.47560295 2940 Q6P996 PDXDC1 Pyridoxal-dependent decarboxylase domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 51.708 51.918 2 0.048847 58631 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 64.803 18.14 233920000 0 0 0 12636000 0 28089000 16599000 21214000 11408000 21447000 21330000 25613000 20135000 24014000 31430000 59486 2940 53495 502343;502344;502345;502346;502347;502348;502349;502350;502351;502352;502353 398453 398453 1 WLGESEK Unmodified 847.40758 0.40758296 484;5026 O75351;Q9UN37 VPS4B;VPS4A Vacuolar protein sorting-associated protein 4B;Vacuolar protein sorting-associated protein 4A no no 0 0 0 By MS/MS 2.5 0.5 1 1 2 31.731 27.284 2 0.035514 35361 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.244 50.505 105530000 0 105530000 0 0 0 0 0 0 0 0 0 0 0 0 0 59487 484;5026 53496 502354;502355 398454 398454 1 WLHGLESQIQSDDYGK Unmodified 1874.8799 0.87989145 2047 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 By MS/MS By MS/MS 2.4 0.49 3 2 3 2 74.948 69.048 3 2.7971E-16 89331 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.804 75.835 80548000 35427000 45120000 0 0 0 0 0 0 0 0 0 0 0 0 0 59488 2047 53497 502356;502357;502358;502359;502360 398455;398456;398457;398458;398459 398459 5 WLHNEDQMAVEK Oxidation (M) 1514.6824 0.68237762 1392 P37837 TALDO1 Transaldolase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 29.199 29.319 3 0.00013889 30513 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.964 73.81 129210000 0 0 0 10422000 1832200 0 0 0 0 7152100 32765000 0 0 0 77043000 59489 1392 53498 502361;502362;502363;502364;502365 398460;398461;398462 398460 2161 3 WLHNEDQMAVEK Unmodified 1498.6875 0.68746299 1392 P37837 TALDO1 Transaldolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 41.508 41.819 3 0.0013219 45869 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 49.243 33.856 173750000 0 0 0 6236600 0 0 0 4194300 0 0 31077000 21737000 0 16263000 94246000 59490 1392 53498 502366;502367;502368;502369;502370;502371 398463;398464;398465;398466;398467;398468 398467 6 WLLDGISSGK Unmodified 1074.571 0.5709599 4538 Q9NP74 PALMD Palmdelphin yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.33 3.77 2 4 1 1 1 1 1 1 79.299 77.634 2 0.0072196 98651 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.787 64.314 71101000 50511000 0 5883500 0 0 0 0 3637600 2511600 0 0 4378100 0 4178800 0 59491 4538 53499 502372;502373;502374;502375;502376;502377 398469;398470;398471 398469 3 WLNDAENLSSDSSLSSPSALNSPGIEGLSR Unmodified 3102.4742 0.47416556 1007 P14859 POU2F1 POU domain, class 2, transcription factor 1 yes yes 0 0 0 By MS/MS 10 0 1 1 86.417 86.525 3 7.301E-08 100348 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 36.311 25.408 3437100 0 0 0 0 0 0 0 0 0 3437100 0 0 0 0 0 59492 1007 53500 502378 398472 398472 1 WLNENAVEK Unmodified 1101.5455 0.54547343 1164 P23526 AHCY Adenosylhomocysteinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.17 3.85 4 2 6 2 3 1 1 1 1 1 1 1 45.854 42.15 2 0.005086 54809 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 111.74 59.336 3405500000 73269000 3187200000 32397000 12395000 4058800 0 0 0 0 0 0 0 0 0 96205000 59493 1164 53501 502379;502380;502381;502382;502383;502384;502385;502386;502387;502388;502389;502390 398473;398474;398475;398476;398477;398478;398479;398480;398481;398482 398474 8 WLNSGRGDEASEEGQNGSSPK Unmodified 2203.973 0.97301657 1361 P35611 ADD1 Alpha-adducin yes yes 0 0 1 By matching By MS/MS By MS/MS 10 0 3 1 1 1 28.644 29.155 3 0.00012407 31023 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 48.656 38.733 23805000 0 0 0 0 0 0 0 0 5779300 0 0 7485100 0 0 10540000 59494 1361 53502 502391;502392;502393 398483;398484 398484 2 WLNSPNTYMK Unmodified 1252.591 0.59104341 4874 Q9UEY8 ADD3 Gamma-adducin yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By matching By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 60.212 60.477 2 0.03995 68973 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 40.067 27.711 28928000 0 0 0 0 0 3316600 1836900 2422300 0 3286600 5392100 2372600 0 3559400 6741900 59495 4874 53503 502394;502395;502396;502397;502398;502399;502400;502401 398485;398486 398486 2 WLNVHYHCSGAPAAPLQ Unmodified 1919.9101 0.91008614 2315 Q13555 CAMK2G Calcium/calmodulin-dependent protein kinase type II subunit gamma yes yes 0 0 0 By MS/MS 2 0 1 1 77.791 69.66 3 0.01059 91692 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 34.498 29.177 9984600 9984600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59496 2315 53504 502402 398487 398487 1 WLPLEANPEVTNQFLK Unmodified 1897.9938 0.993799 1020 P15374 UCHL3 Ubiquitin carboxyl-terminal hydrolase isozyme L3 yes yes 0 0 0 By MS/MS By MS/MS 7.33 3.77 1 2 1 2 93.057 91.542 2;3 0.00063935 106069 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.49 36.146 19556000 0 14766000 0 0 0 0 0 0 0 0 0 0 0 0 4789800 59497 1020 53505 502403;502404;502405 398488;398489;398490;398491;398492 398491 5 WLPSSPSGVAK Unmodified 1127.5975 0.597509 3241 Q8IWI9 MGA MAX gene-associated protein yes yes 0 0 0 By MS/MS 2 0 1 1 60.247 52.005 2 0.044675 70646 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.729 32.757 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59498 3241 53506 502406 398493 398493 1 WLQDLQEENESLK Unmodified 1630.7839 0.7838658 3151 Q86UP2 KTN1 Kinectin yes yes 0 0 0 By MS/MS 10 0 1 1 69.865 70.331 2 0.00093774 80256 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.776 30.055 4990000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4990000 59499 3151 53507 502407 398494 398494 1 WLQDNLTLRK Unmodified 1285.7143 0.71427009 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 1 By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 59.894 60.157 3 0.046921 67794 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 28.204 15.991 125550000 0 0 0 0 0 13742000 0 7467900 923970 12599000 10219000 15820000 12926000 14005000 37852000 59500 3676 53508 502408;502409;502410;502411;502412;502413;502414;502415;502416 398495 398495 1 WLQETSK Unmodified 890.44978 0.44978213 1663 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 24.243 24.5 2 0.029029 24502 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.035 33.261 283880000 0 0 0 29478000 0 28448000 29439000 27566000 0 0 43110000 50968000 0 0 74867000 59501 1663 53509 502417;502418;502419;502420;502421;502422;502423 398496;398497;398498;398499 398497 4 WLQGSQELPR Unmodified 1212.6251 0.62512073 751;752 P01876;P01877 IGHA1;IGHA2 Ig alpha-1 chain C region;Ig alpha-2 chain C region no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 56.001 56.116 2 0.0021587 63495 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 98.033 56.731 162620000 0 0 0 9540800 3120200 4295700 3458100 10187000 0 97089000 10831000 7858800 10215000 0 6022400 59502 751;752 53510 502424;502425;502426;502427;502428;502429;502430;502431;502432;502433 398500;398501;398502;398503;398504;398505;398506;398507;398508;398509 398504 10 WLQGSQELPREK Unmodified 1469.7627 0.76267685 751;752 P01876;P01877 IGHA1;IGHA2 Ig alpha-1 chain C region;Ig alpha-2 chain C region no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 45.639 45.803 3 6.0178E-06 51372 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 109.16 101.25 223230000 0 0 0 19637000 0 0 15088000 24361000 0 122970000 0 0 20564000 5580000 15025000 59503 751;752 53511 502434;502435;502436;502437;502438;502439;502440 398510;398511;398512;398513;398514;398515;398516;398517 398511 8 WLREAEEESDHN Unmodified 1513.6433 0.64334957 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.15 3.37 3 10 1 1 1 1 1 1 1 1 1 1 1 1 1 31.686 30.723 3 0.00095794 31851 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.997 67.067 314130000 52965000 12234000 13427000 13089000 10724000 2824400 0 0 22712000 24915000 26189000 39018000 29593000 33369000 33074000 59504 2102 53512 502441;502442;502443;502444;502445;502446;502447;502448;502449;502450;502451;502452;502453 398518;398519;398520;398521;398522;398523;398524;398525 398518 7 WLSTSIPEAQWHSSLAR Unmodified 1967.9854 0.98535957 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 78.75 78.891 3 0.0034252 90707 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 39.348 28.881 92176000 0 0 0 0 0 18258000 0 0 0 0 6304600 0 0 6092400 61522000 59505 1565 53513 502454;502455;502456;502457 398526;398527 398527 2 WLVIDPVPAAVPTQVAGPK Unmodified 1957.1037 0.1036838 2921 Q6P1N0 CC2D1A Coiled-coil and C2 domain-containing protein 1A yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 92.088 92.184 2 9.9017E-05 107102 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 75.045 73.737 12075000 0 0 0 0 522110 1001200 459260 1067800 0 2231800 1638200 0 0 868520 4286000 59506 2921 53514 502458;502459;502460;502461;502462;502463;502464;502465 398528;398529;398530;398531;398532 398529 5 WMALESLQTQK Unmodified 1333.67 0.67002202 867 P08581 MET Hepatocyte growth factor receptor yes yes 0 0 0 By MS/MS 2 0 1 1 80.834 72.703 2 0.00072978 95328 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 113.62 92.623 7397400 7397400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59507 867 53515 502466 398533 398533 1 WMDEAQALDTADR Oxidation (M) 1536.6515 0.65147142 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 51.797 52.077 2 1.4522E-09 58164 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 115.33 88.62 593620000 0 0 0 0 0 0 23586000 21776000 23967000 96432000 153290000 274560000 0 0 0 59508 4226 53516 502467;502468;502469;502470;502471;502472 398534;398535;398536;398537;398538;398539;398540;398541 398540 5704 8 WMDEAQALDTADR Unmodified 1520.6566 0.6565568 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 64.293 64.526 2 3.4378E-08 73655 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 125.74 118.09 295640000 0 0 0 0 0 0 11032000 22748000 12075000 53613000 82254000 113920000 0 0 0 59509 4226 53516 502473;502474;502475;502476;502477;502478 398542;398543;398544;398545;398546;398547 398547 6 WMDEAQALDTADRFINSK Oxidation (M) 2125.9739 0.97386819 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 1 1 By MS/MS By MS/MS 10 0 2 1 1 80.93 81.122 3 2.287E-08 93815 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 83.253 44.337 77753000 0 0 0 0 0 0 0 16165000 0 0 61588000 0 0 0 0 59510 4226 53517 502479;502480 398548;398549 398548 5704 2 WMDEAQSLDTADR Oxidation (M) 1552.6464 0.64638604 2895 Q6N069 NAA16 N-alpha-acetyltransferase 16, NatA auxiliary subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 46.522 46.401 2 8.268E-13 52164 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 125.23 119.25 54353000 0 0 0 6014700 8905600 0 0 0 0 15672000 23760000 0 0 0 0 59511 2895 53518 502481;502482;502483;502484;502485 398550;398551;398552;398553;398554;398555;398556;398557;398558 398555 4534 9 WMDEAQSLDTADR Unmodified 1536.6515 0.65147142 2895 Q6N069 NAA16 N-alpha-acetyltransferase 16, NatA auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 57.429 57.579 2 0.0010082 65302 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 78.653 63.113 33204000 0 0 0 0 3808700 0 0 0 0 0 12766000 16629000 0 0 0 59512 2895 53518 502486;502487;502488;502489 398559;398560;398561;398562 398559 4 WMDEAQSLDTADRFINSK Oxidation (M) 2141.9688 0.96878281 2895 Q6N069 NAA16 N-alpha-acetyltransferase 16, NatA auxiliary subunit yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 75.008 75.153 3 6.1044E-08 86480 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 80.638 76.919 146940000 0 0 0 0 0 7814800 0 15327000 0 39640000 31102000 53053000 0 0 0 59513 2895 53519 502490;502491;502492;502493;502494 398563;398564;398565;398566;398567 398566 4534 5 WMEEQAQSLIDK Oxidation (M) 1492.6868 0.68679429 880 P09234 SNRPC U1 small nuclear ribonucleoprotein C yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 60.549 59.673 2 5.4095E-34 68671 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 172.27 161.25 794020000 0 363450000 4021400 31570000 29275000 25098000 34510000 33808000 25052000 32822000 38973000 54432000 35962000 34400000 50652000 59514 880 53520 502495;502496;502497;502498;502499;502500;502501;502502;502503;502504;502505;502506;502507;502508;502509 398568;398569;398570;398571;398572;398573;398574;398575;398576;398577;398578;398579;398580;398581;398582;398583;398584 398584 1133 17 WMEEQAQSLIDK Unmodified 1476.6919 0.69187967 880 P09234 SNRPC U1 small nuclear ribonucleoprotein C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71.431 70.41 2 1.9682E-37 87891 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 199.11 188.35 1868100000 14339000 1406400000 5291900 11161000 17354000 24611000 16589000 41819000 25243000 45526000 38963000 55067000 25982000 36238000 103470000 59515 880 53520 502510;502511;502512;502513;502514;502515;502516;502517;502518;502519;502520;502521;502522;502523;502524 398585;398586;398587;398588;398589;398590;398591;398592;398593;398594;398595;398596;398597;398598;398599;398600;398601;398602 398589 18 WMIPSEAK Unmodified 960.47389 0.47388839 1615 P50213 IDH3A Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 65.765 60.929 2 0.019411 78182 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.953 51.073 65937000 0 63365000 2572400 0 0 0 0 0 0 0 0 0 0 0 0 59516 1615 53521 502525;502526 398603 398603 1 WMIQYNNLNLK Unmodified 1435.7282 0.7282056 953 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS 10 0 1 1 82.015 82.218 2 0.0048651 94845 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.436 49.34 8609100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8609100 59517 953 53522 502527 398604 398604 1 WMIQYNNLNLK Oxidation (M) 1451.7231 0.72312022 953 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 0 1 0 By MS/MS By MS/MS 6 4 1 1 1 1 83.477 75.347 2 0.00033463 98495 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.9 85.366 13401000 13401000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59518 953 53522 502528;502529 398605;398606 398606 1235 2 WMPGITQWK Unmodified 1145.5692 0.56918576 2168 Q08J23 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 78.735 78.882 2 0.030622 90762 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.047 42.378 24763000 0 0 0 0 0 0 0 0 0 0 0 0 3296400 8544000 12922000 59519 2168 53523 502530;502531;502532 398607 398607 1 WMQVASLNEK Unmodified 1204.591 0.59104341 4824 Q9P2N7;Q9P2J3 KLHL13;KLHL9 Kelch-like protein 13;Kelch-like protein 9 yes no 0 0 0 By MS/MS 2 0 1 1 69.757 61.472 2 0.00618 81876 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.647 54.485 15904000 15904000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59520 4824 53524 502533 398608 398608 1 WNENVQYLSEDR Unmodified 1551.6954 0.69538514 380 O43929 ORC4 Origin recognition complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.351 61.444 2 2.723E-05 70356 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 113.47 102.95 89545000 0 0 0 5003600 4894200 7884500 5849100 0 4591400 10475000 8946900 14203000 6114400 8385400 13197000 59521 380 53525 502534;502535;502536;502537;502538;502539;502540;502541;502542;502543;502544;502545 398609;398610;398611;398612;398613;398614;398615;398616;398617;398618;398619;398620;398621 398621 13 WNGETEPPAAPAALLK Unmodified 1663.857 0.85697116 3588 Q8WXE0 CASKIN2 Caskin-2 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.27 77.328 2 0.00020052 88852 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.555 65.114 85649000 0 0 0 4372600 4728200 5421500 6364800 6435100 5979700 7798300 8481800 9512500 4379800 7687300 14487000 59522 3588 53526 502546;502547;502548;502549;502550;502551;502552;502553;502554;502555;502556;502557 398622;398623;398624 398622 3 WNGSVHGSK Unmodified 970.46208 0.46207815 2195 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 10.429 7.37 2 0.044173 11704 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 59.368 29.183 33761000 33059000 0 701980 0 0 0 0 0 0 0 0 0 0 0 0 59523 2195 53527 502558;502559 398625 398625 1 WNLDELPK Unmodified 1013.5182 0.51819605 1062 P17844 DDX5 Probable ATP-dependent RNA helicase DDX5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76.031 75.557 2 0.0088662 87095 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 84.743 58.804 563740000 0 170730000 11131000 14276000 18733000 36784000 18873000 22656000 35810000 35255000 36239000 36028000 33447000 33247000 60535000 59524 1062 53528 502560;502561;502562;502563;502564;502565;502566;502567;502568;502569;502570;502571;502572;502573 398626;398627;398628;398629;398630;398631;398632;398633;398634;398635;398636;398637;398638;398639 398637 14 WNLLQQQTTTTSSK Unmodified 1634.8264 0.82639932 77 CON__P19013;P19013 KRT4 Keratin, type II cytoskeletal 4 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 63.874 63.922 2 6.8383E-08 72805 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 118.9 109.25 + 321030000 0 0 0 7219400 0 0 80526000 182980000 0 0 0 9387000 40915000 0 0 59525 77 53529 502574;502575;502576;502577;502578 398640;398641;398642;398643;398644 398641 5 WNPTQNVR Unmodified 1013.5043 0.50427732 3028;1574 P49427;Q712K3 CDC34;UBE2R2 Ubiquitin-conjugating enzyme E2 R1;Ubiquitin-conjugating enzyme E2 R2 no no 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.266 35.447 2 0.0081248 39003 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 87.284 65.82 271260000 0 0 0 12224000 12779000 18926000 16740000 14684000 15196000 32357000 25940000 34426000 23627000 23209000 41148000 59526 1574;3028 53530 502579;502580;502581;502582;502583;502584;502585;502586;502587;502588;502589;502590 398645;398646;398647;398648;398649;398650;398651;398652;398653 398651 9 WNQDTMEQK Unmodified 1178.5026 0.50262234 2554 Q15637 SF1 Splicing factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 25.296 25.498 2 0.003405 27191 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 117.04 99.796 160820000 0 0 0 7431800 7894900 6955600 13360000 6813700 9256600 8418100 11306000 15402000 11561000 18178000 44240000 59527 2554 53531 502591;502592;502593;502594;502595;502596;502597;502598;502599;502600;502601;502602 398654;398655;398656;398657;398658;398659;398660;398661 398655 8 WNSPAEEGSSDCEVFSK Unmodified 1927.7894 0.78942146 1337 P34932 HSPA4 Heat shock 70 kDa protein 4 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 58.149 58.437 2 1.1996E-31 65654 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 138.42 134.66 144230000 0 0 0 0 0 2271700 0 5685700 0 4754600 29078000 15171000 5106600 21197000 60962000 59528 1337 53532 502603;502604;502605;502606;502607;502608;502609;502610 398662;398663;398664;398665;398666;398667 398663 6 WNSVSPASAGK Unmodified 1102.5407 0.5407224 3147 Q86UE4 MTDH Protein LYRIC yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 34.626 29.13 2 0.00046124 40678 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 103.42 71.484 102880000 33077000 69800000 0 0 0 0 0 0 0 0 0 0 0 0 0 59529 3147 53533 502611;502612 398668;398669 398669 2 WNTDSVEEFLSEK Unmodified 1582.7151 0.71511753 418 O60613 SEP15 15 kDa selenoprotein yes yes 0 0 0 By MS/MS 2 0 1 1 90.567 85.671 2 7.2907E-18 106422 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.82 94.167 30095000 0 30095000 0 0 0 0 0 0 0 0 0 0 0 0 0 59530 418 53534 502613 398670 398670 1 WNTTLYEGTWR Unmodified 1425.6677 0.66771383 841 P07384 CAPN1 Calpain-1 catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 75.419 75.619 2 0.0048809 87008 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.398 45.731 11941000 0 0 0 0 0 0 0 0 0 0 0 0 1881300 0 10059000 59531 841 53535 502614;502615 398671 398671 1 WNVDSVHAK Unmodified 1054.5196 0.51959303 4665 Q9NVD7 PARVA Alpha-parvin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 34.648 33.818 2 0.013914 43226 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 82.563 62.86 133030000 77428000 0 25208000 0 1667300 4798500 2925900 0 1534800 5447000 4019100 3895100 0 0 6105700 59532 4665 53536 502616;502617;502618;502619;502620;502621;502622;502623;502624;502625 398672;398673;398674 398674 3 WNVEMESSR Unmodified 1136.4921 0.49205765 3993 Q96ST2 IWS1 Protein IWS1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.543 46.709 2 0.0063245 52261 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 75.378 61.221 135070000 0 0 0 4431700 6344000 7467900 6321700 6587600 6859700 10641000 20041000 18213000 14303000 11457000 22399000 59533 3993 53537 502626;502627;502628;502629;502630;502631;502632;502633;502634;502635;502636;502637 398675;398676;398677;398678;398679;398680;398681;398682;398683;398684;398685 398680 11 WNVEMESSR Oxidation (M) 1152.487 0.48697227 3993 Q96ST2 IWS1 Protein IWS1 homolog yes yes 0 1 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 31.793 31.891 2 0.014133 34206 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 52.255 41.389 18581000 0 0 0 0 2821500 3743000 0 0 0 0 0 12017000 0 0 0 59534 3993 53537 502638;502639;502640 398686;398687 398686 5472 2 WNVEMESSRFQATSK Oxidation (M) 1814.8257 0.82574739 3993 Q96ST2 IWS1 Protein IWS1 homolog yes yes 0 1 1 By MS/MS 2 0 1 1 60.581 52.339 3 0.00038128 70931 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.344 59.905 19851000 19851000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59535 3993 53538 502641 398688;398689;398690 398688 5472 3 WNVSRPSLLADSK Unmodified 1471.7783 0.77832691 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 64.03 64.223 3 0.0023639 72771 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 53.377 44.488 114270000 0 0 0 0 4608400 0 0 12521000 8246500 0 13522000 20608000 14385000 10132000 30247000 59536 2930 53539 502642;502643;502644;502645;502646;502647;502648;502649 398691;398692;398693;398694 398693 4 WNVTTTNYGK Unmodified 1182.5669 0.56693715 2837 Q5XPI4 RNF123 E3 ubiquitin-protein ligase RNF123 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 51.092 44.258 2 0.003406 60504 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.358 85.964 37240000 18876000 18364000 0 0 0 0 0 0 0 0 0 0 0 0 0 59537 2837 53540 502650;502651 398695;398696 398696 2 WPECNALSR Unmodified 1131.5131 0.51312744 2465 Q14CX7 NAA25 N-alpha-acetyltransferase 25, NatB auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 49.83 49.958 2 0.0037823 56330 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 88.948 71.852 61393000 0 0 0 0 0 0 17538000 21003000 22852000 0 0 0 0 0 0 59538 2465 53541 502652;502653;502654 398697;398698;398699;398700 398699 4 WPETPLLLEASEFMAEESNEK Unmodified 2449.1359 0.13590772 4750 Q9NYU1 UGGT2 UDP-glucose:glycoprotein glucosyltransferase 2 yes yes 0 0 0 By MS/MS 2 0 1 1 101.53 93.398 3 0.0029679 120271 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 35.992 31.895 4191000 4191000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59539 4750 53542 502655 398701 398701 1 WPEVDDDSIEDLGEVK Unmodified 1844.8316 0.83160385 343 O43583 DENR Density-regulated protein yes yes 0 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 2 2 85.503 82.276 2;3 0 101791 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 301.35 289.29 405100000 0 371830000 33276000 0 0 0 0 0 0 0 0 0 0 0 0 59540 343 53543 502656;502657;502658;502659 398702;398703;398704;398705;398706 398702 5 WPEVDDDSIEDLGEVKK Unmodified 1972.9266 0.92656687 343 O43583 DENR Density-regulated protein yes yes 0 0 1 By MS/MS By matching 2 0 2 1 1 81.122 74.689 3 0.00016923 97735 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.774 72.986 83510000 28889000 54621000 0 0 0 0 0 0 0 0 0 0 0 0 0 59541 343 53544 502660;502661 398707 398707 1 WPGDILAYK Unmodified 1061.5546 0.55458155 4879 Q9UG63 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80.191 79.216 2 0.0074164 91862 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 72.485 55.099 590530000 70462000 36963000 20498000 23109000 15725000 38969000 24303000 41947000 27697000 49548000 38037000 52477000 41837000 35429000 73527000 59542 4879 53545 502662;502663;502664;502665;502666;502667;502668;502669;502670;502671;502672;502673;502674;502675;502676 398708;398709;398710;398711;398712;398713;398714;398715;398716;398717;398718;398719;398720;398721;398722;398723;398724;398725;398726;398727;398728 398717 21 WPLLDVQAGSLQSR Unmodified 1568.8311 0.83109076 4564 Q9NQB0 TCF7L2 Transcription factor 7-like 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 84.974 85.152 2 0.0003604 98410 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.695 59.063 4841600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4841600 59543 4564 53546 502677;502678;502679 398729;398730;398731 398730 3 WPTETDVSSAK Unmodified 1219.5721 0.57208211 1226 P27816 MAP4 Microtubule-associated protein 4 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 43.332 43.523 2 0.0080253 48726 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 60.434 35.296 101520000 0 0 0 4185600 5723900 0 4825800 6298700 0 8978100 10902000 16124000 10044000 10787000 23655000 59544 1226 53547 502680;502681;502682;502683;502684;502685;502686;502687;502688;502689 398732;398733;398734;398735;398736;398737 398736 6 WPVAGQIR Unmodified 925.51339 0.51338544 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 54.332 54.468 2 0.018337 60792 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.523 42.752 538280000 0 0 0 40783000 38696000 33187000 48556000 40820000 31531000 41549000 46515000 47755000 33808000 63954000 71124000 59545 1986 53548 502690;502691;502692;502693;502694;502695;502696;502697;502698;502699;502700;502701 398738;398739;398740;398741 398738 2 WQALPALR Unmodified 953.54469 0.54468557 2791 Q5TAQ9 DCAF8 DDB1- and CUL4-associated factor 8 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 72.231 72.352 2 0.011473 83249 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 76.847 63.294 32452000 0 0 0 0 2069600 2400600 3138600 0 0 3510000 4217600 4725100 0 3561900 8828500 59546 2791 53549 502702;502703;502704;502705;502706;502707;502708;502709 398742;398743;398744;398745;398746 398744 5 WQAVLAQTDVR Unmodified 1285.6779 0.67788459 2501 Q15149 PLEC Plectin yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 63.794 63.528 2 0.0048809 72378 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 60.398 39.426 11500000 0 0 0 6874000 0 0 0 0 4626500 0 0 0 0 0 0 59547 2501 53550 502710;502711 398747;398748 398747 1 WQDAQATLQK Unmodified 1187.5935 0.59348625 2323 Q13596 SNX1 Sorting nexin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 35.928 36.109 2 0.0020304 39973 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 105.94 66.973 138540000 0 0 0 8004400 6100000 12697000 8820000 8105800 5126500 14036000 14043000 16630000 9732400 11752000 23494000 59548 2323 53551 502712;502713;502714;502715;502716;502717;502718;502719;502720;502721;502722;502723 398749;398750;398751;398752;398753;398754;398755;398756;398757;398758 398749 8 WQDIQNDPR Unmodified 1170.5418 0.54178503 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.991 33.176 2 0.007805 35223 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 81.296 65.094 251210000 0 0 0 14554000 14574000 13651000 18339000 24074000 14248000 23735000 30295000 25076000 23761000 20137000 28767000 59549 2451 53552 502724;502725;502726;502727;502728;502729;502730;502731;502732;502733;502734;502735 398759;398760;398761;398762;398763;398764;398765;398766;398767;398768 398761 10 WQEPPPVK Unmodified 979.51272 0.51271674 3579 Q8WWY3 PRPF31 U4/U6 small nuclear ribonucleoprotein Prp31 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39.762 39.286 2 0.015253 43567 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 69.176 59.935 315980000 0 122580000 644740 10563000 10899000 13472000 11317000 14213000 11350000 20624000 23826000 21317000 16337000 14612000 24228000 59550 3579 53553 502736;502737;502738;502739;502740;502741;502742;502743;502744;502745;502746;502747;502748;502749 398769;398770;398771;398772;398773;398774 398771 6 WQFDIECDK Unmodified 1239.523 0.52302343 2261 Q13257 MAD2L1 Mitotic spindle assembly checkpoint protein MAD2A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 73.304 73.35 2 0.0094767 84459 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 66.621 57.858 102620000 0 0 0 2905000 3691700 10368000 3951200 7118700 6276100 10355000 12511000 0 8672600 12061000 24712000 59551 2261 53554 502750;502751;502752;502753;502754;502755;502756;502757;502758;502759;502760 398775;398776;398777;398778;398779;398780 398775 6 WQFSMSAIK Unmodified 1096.5376 0.53755128 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 79.408 79.513 2 0.0030483 91877 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 91.318 73.932 180540000 0 0 0 0 6887200 12850000 7449900 17959000 16141000 12943000 15065000 22635000 9960500 18689000 39962000 59552 213 53555 502761;502762;502763;502764;502765;502766;502767;502768;502769;502770;502771 398781;398782;398783;398784;398785;398786;398787;398788;398789;398790;398791;398792 398782 12 WQFSMSAIK Oxidation (M) 1112.5325 0.5324659 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 62.542 62.595 2 0.0034219 71452 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 80.684 72.744 226290000 0 0 0 13852000 17559000 20437000 22368000 20119000 16424000 19087000 20231000 29131000 22917000 24168000 0 59553 213 53555 502772;502773;502774;502775;502776;502777;502778;502779;502780;502781;502782 398793;398794;398795;398796;398797;398798;398799;398800;398801;398802 398795 289 7 WQGNDIVVK Unmodified 1057.5556 0.55564418 2284 Q13418 ILK Integrin-linked protein kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 47.692 47.893 2 0.046872 53041 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 42.869 12.257 50033000 0 0 0 0 0 6916200 5013400 5003200 2970800 10504000 7390200 0 7214700 5020800 0 59554 2284 53556 502783;502784;502785;502786;502787;502788;502789;502790 398803 398803 1 WQHDLFDSGFGGGAGVETGGK Unmodified 2120.9552 0.95518166 3162 Q86V81 ALYREF THO complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 6.25 3.77 2 2 4 2 2 1 1 1 1 78.805 76.397 3 7.9704E-09 97206 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 79.635 77.537 73601000 18766000 31310000 0 0 0 2275500 0 0 4216800 0 1494900 0 0 0 15538000 59555 3162 53557 502791;502792;502793;502794;502795;502796;502797;502798 398804;398805;398806;398807;398808 398808 4 WQNADLNGK Unmodified 1044.4989 0.49885759 1006 P14735 IDE Insulin-degrading enzyme yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 29.534 27.184 2 0.007643 34701 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.933 82.639 117620000 0 100950000 0 16668000 0 0 0 0 0 0 0 0 0 0 0 59556 1006 53558 502799;502800 398809;398810 398809 2 WQNNLLPSR Unmodified 1126.5883 0.5883413 1878 P62244 RPS15A 40S ribosomal protein S15a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 59.897 59.915 2 0.0030483 68905 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 91.318 72.224 90405000 0 0 0 0 12357000 0 16699000 21033000 14843000 25473000 0 0 0 0 0 59557 1878 53559 502801;502802;502803;502804;502805 398811;398812 398812 2 WQNSYSIK Unmodified 1024.4978 0.49779495 2585;2279 Q13404;Q15819 UBE2V1;UBE2V2 Ubiquitin-conjugating enzyme E2 variant 1;Ubiquitin-conjugating enzyme E2 variant 2 no no 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41.714 40.752 2 0.0066594 45379 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 98.997 83.557 2454500000 1217900000 841230000 84261000 8272000 6862500 41873000 13846000 13229000 9869300 31658000 33830000 25836000 20491000 29957000 75342000 59558 2279;2585 53560 502806;502807;502808;502809;502810;502811;502812;502813;502814;502815;502816;502817;502818;502819;502820 398813;398814;398815;398816;398817;398818;398819;398820;398821 398817 8 WQPDTEEEYEDSSGNVVNK Unmodified 2224.9397 0.93965075 2202 Q12874 SF3A3 Splicing factor 3A subunit 3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 1 2 1 2 2 1 2 2 2 2 2 55.183 55.385 2;3 9.8718E-31 62730 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 117.92 116.39 290790000 0 0 0 4207000 10403000 25537000 9077100 19388000 16400000 18731000 35021000 39170000 19758000 25727000 67370000 59559 2202 53561 502821;502822;502823;502824;502825;502826;502827;502828;502829;502830;502831;502832;502833;502834;502835;502836;502837;502838;502839;502840 398822;398823;398824;398825;398826;398827;398828;398829;398830;398831;398832;398833;398834 398823 11 WQPDTEEEYEDSSGNVVNKK Unmodified 2353.0346 0.03461377 2202 Q12874 SF3A3 Splicing factor 3A subunit 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.969 49.127 3 1.88E-28 55397 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 101.92 100.56 365510000 0 0 0 23474000 26151000 15558000 25839000 27773000 22953000 30607000 34526000 42413000 32077000 35113000 49025000 59560 2202 53562 502841;502842;502843;502844;502845;502846;502847;502848;502849;502850;502851;502852 398835;398836;398837;398838;398839;398840;398841;398842;398843;398844;398845;398846;398847;398848;398849;398850 398838 16 WQPGEEPAGSVVQDSR Unmodified 1740.8067 0.80672651 5235 Q9Y5K5 UCHL5 Ubiquitin carboxyl-terminal hydrolase isozyme L5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 54.886 55.045 2 0.0003043 62458 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 67.519 54.319 63657000 0 0 0 0 4686500 8967800 9185000 0 0 0 12085000 12404000 7961400 8366700 0 59561 5235 53563 502853;502854;502855;502856;502857;502858;502859 398851;398852;398853;398854;398855;398856;398857 398851 7 WQPTASEPVK Unmodified 1141.5768 0.57677356 2680 Q49A26 GLYR1 Putative oxidoreductase GLYR1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 40.424 40.412 2 0.035593 44761 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 41.427 24.062 6955200 0 0 0 0 2292600 0 0 0 0 0 4662600 0 0 0 0 59562 2680 53564 502860;502861 398858 398858 1 WQQEQER Unmodified 1002.4519 0.45190739 5054 Q9UPQ0 LIMCH1 LIM and calponin homology domains-containing protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 10.188 10.328 2 0.037306 7618 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 69.998 46.026 50537000 0 0 0 2439000 2355300 2915000 3361200 2580500 2338400 4007800 8665100 5455800 5350600 3120300 7947500 59563 5054 53565 502862;502863;502864;502865;502866;502867;502868;502869;502870;502871;502872;502873 398859;398860 398860 2 WQQLQAK Unmodified 900.48175 0.48175096 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 28.026 27.681 2 0.02376 30013 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 93.593 60.235 302860000 58587000 0 0 12167000 12964000 17888000 16790000 18670000 14974000 21771000 0 42717000 29261000 22913000 34152000 59564 2930 53566 502874;502875;502876;502877;502878;502879;502880;502881;502882;502883;502884;502885 398861;398862;398863;398864;398865;398866;398867;398868;398869;398870 398861 10 WQVINQR Unmodified 942.50355 0.50354903 4491 Q9HAV4 XPO5 Exportin-5 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 41.421 41.662 2 0.04788 46443 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 65.263 47.877 96140000 0 0 0 0 4376500 13313000 8054100 7832000 5046300 10481000 7528700 8946100 7124300 8964000 14474000 59565 4491 53567 502886;502887;502888;502889;502890;502891;502892;502893;502894;502895;502896 398871 398871 1 WRDLPYDQASWESEDVEIQDYDLFK Unmodified 3146.4145 0.41452542 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 0 1 By MS/MS 2 0 1 1 96.186 88.056 3 5.785E-56 113782 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 123.53 116.65 24453000 24453000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59566 2451 53568 502897 398872 398872 1 WREFSTNNPFK Unmodified 1424.6837 0.68369824 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 0 1 By matching By MS/MS By MS/MS 10 0 3 1 1 1 62.853 63.093 3 0.0015056 71101 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.005 47.569 31389000 0 0 0 0 0 9721600 0 0 3603700 0 0 0 0 0 18064000 59567 2451 53569 502898;502899;502900 398873 398873 1 WRPDEEILK Unmodified 1184.619 0.61897272 916 P10155 TROVE2 60 kDa SS-A/Ro ribonucleoprotein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 58.809 57.78 3 0.013263 76178 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.626 51.395 160860000 31510000 36788000 0 4406800 0 7282600 0 6257300 5249600 4759400 7881100 7473000 10945000 13712000 24590000 59568 916 53570 502901;502902;502903;502904;502905;502906;502907;502908;502909;502910;502911;502912 398874;398875;398876 398874 2 WRPGDADGTDCTSIGTIEQK Unmodified 2205.9961 0.99606019 4139 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 0 1 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 58.479 58.208 3 3.4118E-13 66264 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 77.391 72.182 125070000 0 0 5259900 11705000 2471600 0 0 10980000 0 10431000 14297000 22848000 15570000 14199000 17304000 59569 4139 53571 502913;502914;502915;502916;502917;502918;502919;502920;502921;502922 398877;398878;398879;398880;398881;398882;398883;398884;398885 398880 8 WRPVDLAQVK Unmodified 1210.6822 0.68224168 1315 P32004 L1CAM Neural cell adhesion molecule L1 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 63.515 63.864 3 0.030681 72250 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 27.989 21.954 9278100 0 0 0 0 0 0 3595800 0 0 0 0 0 0 0 5682300 59570 1315 53572 502923;502924 398886 398886 1 WRVENQENVSNLVIEDTELK Unmodified 2414.2078 0.20776753 2055 Q01518 CAP1 Adenylyl cyclase-associated protein 1 yes yes 0 0 1 By MS/MS By MS/MS 2.25 0.433 3 1 3 1 85.171 79.581 2;3 2.6706E-37 101950 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 121.21 114.54 191590000 186750000 0 4836400 0 0 0 0 0 0 0 0 0 0 0 0 59571 2055 53573 502925;502926;502927;502928 398887;398888;398889;398890 398888 4 WRVEYQEDRNDLVISETELK Unmodified 2521.2449 0.24488132 1408 P40123 CAP2 Adenylyl cyclase-associated protein 2 yes yes 0 0 2 By MS/MS 2.5 0.5 1 1 2 80.687 74.741 4 0.00011572 96383 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.342 42.041 31094000 31094000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59572 1408 53574 502929;502930 398891;398892;398893 398893 3 WSDGSMSLHLGNEVFDVYK Unmodified 2182.9994 0.99935466 3560 Q8WVC0 LEO1 RNA polymerase-associated protein LEO1 yes yes 0 0 0 By MS/MS 2 0 1 1 92.621 84.491 3 0.035919 109537 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 39.849 30.685 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59573 3560 53575 502931 398894 398894 1 WSDQGPAQTSR Unmodified 1231.5582 0.55816338 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.154 22.36 2 1.6427E-05 22188 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 134.23 124.64 276410000 0 0 0 13502000 10638000 18241000 10181000 17275000 14430000 31857000 32154000 41726000 25969000 25620000 34817000 59574 4285 53576 502932;502933;502934;502935;502936;502937;502938;502939;502940;502941;502942;502943 398895;398896;398897;398898;398899;398900;398901;398902;398903;398904 398901 9 WSDVAGLEGAK Unmodified 1131.556 0.55603812 484 O75351 VPS4B Vacuolar protein sorting-associated protein 4B yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 57.213 52.367 2 0.0016561 67247 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.898 67.195 182120000 0 179110000 3006700 0 0 0 0 0 0 0 0 0 0 0 0 59575 484 53577 502944;502945;502946 398905;398906 398905 2 WSEALVLYDR Unmodified 1250.6295 0.62953741 4895 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 77.345 77.507 2 0.0045025 88999 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.607 53.827 24569000 0 0 0 0 0 0 1797400 2926700 3460700 5306600 0 0 3091500 0 7986400 59576 4895 53578 502947;502948;502949;502950;502951;502952;502953 398907;398908;398909;398910;398911 398909 5 WSEDCRLEGGGGPAGGFEDEGEDK Unmodified 2553.035 0.035024475 1628 P50548 ERF ETS domain-containing transcription factor ERF yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 58.292 58.803 3 7.3571E-22 66226 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.445 66.7 17286000 0 0 0 0 0 0 0 0 0 0 5554300 4107400 0 0 7624200 59577 1628 53579 502954;502955;502956 398912;398913;398914 398912 3 WSEPNEEELIK Unmodified 1372.6511 0.65106071 1405 P39748 FEN1 Flap endonuclease 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 2 1 1 1 1 1 1 1 1 1 1 66.171 65.206 2 4.4655E-09 82744 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.66 110.87 3674300000 0 2966500000 19085000 37885000 0 70770000 56400000 0 27875000 98983000 77556000 79671000 55467000 52675000 131400000 59578 1405 53580 502957;502958;502959;502960;502961;502962;502963;502964;502965;502966;502967;502968;502969;502970;502971 398915;398916;398917;398918;398919;398920;398921;398922;398923;398924;398925;398926;398927;398928 398918 14 WSETQNVVTK Unmodified 1190.5932 0.5931519 3927 Q96MW1 CCDC43 Coiled-coil domain-containing protein 43 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 34.895 35.375 2 0.0024208 38461 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 83.783 69.109 92219000 0 0 0 0 0 0 0 0 0 11039000 16658000 21652000 0 13701000 29169000 59579 3927 53581 502972;502973;502974;502975;502976 398929;398930;398931;398932;398933 398930 5 WSFDDVPMTPLR Oxidation (M) 1478.6864 0.68640036 4810 Q9P287 BCCIP BRCA2 and CDKN1A-interacting protein yes yes 0 1 0 By matching By MS/MS 10 0 2 1 1 82.563 82.76 2 0.0063065 95500 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.559 33.065 11532000 0 0 0 0 0 0 0 1825900 0 0 0 0 0 0 9706200 59580 4810 53582 502977;502978 398934 398934 6173 1 WSFDDVPMTPLR Unmodified 1462.6915 0.69148574 4810 Q9P287 BCCIP BRCA2 and CDKN1A-interacting protein yes yes 0 0 0 By MS/MS 10 0 1 1 88.406 88.556 2 0.020245 102530 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.589 23.957 2752400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2752400 59581 4810 53582 502979 398935 398935 1 WSGPLSLQEVDEQPQHPLHVTYAGAAVDELGK Unmodified 3470.7106 0.71064786 1269 P30086 PEBP1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide yes yes 0 0 0 By MS/MS 3 0 1 1 87.893 84.682 4 0.01134 101350 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 21.304 19.221 14372000 0 14372000 0 0 0 0 0 0 0 0 0 0 0 0 0 59582 1269 53583 502980 398936 398936 1 WSLLQQQK Unmodified 1029.5607 0.56072956 67;51 CON__H-INV:HIT000292931;CON__P05787;P05787;CON__Q9H552 KRT8 Keratin, type II cytoskeletal 8 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60.759 59.728 2 0.0026844 66689 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 148.07 111.1 + 4512900000 287610000 20311000 23122000 264280000 278950000 324350000 316490000 277330000 216760000 378470000 366860000 571520000 302450000 290050000 594350000 59583 51;67 53584 502981;502982;502983;502984;502985;502986;502987;502988;502989;502990;502991;502992;502993;502994;502995 398937;398938;398939;398940;398941;398942;398943;398944;398945;398946;398947;398948;398949;398950;398951;398952;398953;398954;398955;398956;398957 398942 19 WSLNTYK Unmodified 910.45487 0.45486751 1712 P53367 ARFIP1 Arfaptin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 58.854 52.875 2 0.028135 71423 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.51 71.512 48906000 29598000 15567000 3740200 0 0 0 0 0 0 0 0 0 0 0 0 59584 1712 53585 502996;502997;502998 398958 398958 1 WSLQSEAHR Unmodified 1112.5363 0.53630573 2626 Q16658 FSCN1 Fascin yes yes 0 0 0 By MS/MS 10 0 1 1 35.441 36.173 2 0.0061887 38824 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.738 51.583 10119000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10119000 59585 2626 53586 502999 398959 398959 1 WSLQSEAHRR Unmodified 1268.6374 0.63741675 2626 Q16658 FSCN1 Fascin yes yes 0 0 1 By MS/MS 10 0 1 1 28.244 28.932 3 0.0057059 30043 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.001 42.001 71538000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 71538000 59586 2626 53587 503000 398960 398960 1 WSMPELAEVEENK Unmodified 1560.713 0.71300904 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 82.066 82.177 2 0.028466 94784 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 35.348 10.11 10037000 0 0 0 0 0 2903000 0 0 0 0 0 0 0 0 7133800 59587 2451 53588 503001;503002 398961 398961 1 WSMPELAEVEENKK Oxidation (M) 1704.8029 0.80288668 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 58.502 58.724 3 0.0024688 66387 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 40.477 35.929 27277000 0 0 0 0 0 8589300 5303500 0 0 9677000 0 0 0 0 3707300 59588 2451 53589 503003;503004;503005;503006 398962 398962 4027 1 WSMPELAEVEENKK Unmodified 1688.808 0.80797206 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 76.711 76.727 3 0.017823 88068 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 28.956 25.516 22524000 0 0 0 1401500 0 0 0 4368100 0 0 0 0 5579200 0 11175000 59589 2451 53589 503007;503008;503009;503010 398963 398963 1 WSNIYEDNGDDAPQNAK Unmodified 1935.8235 0.82349878 3360 Q8N6N3 C1orf52 UPF0690 protein C1orf52 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 52.202 46.867 2 2.1287E-105 60737 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 259.7 257.82 62034000 0 62034000 0 0 0 0 0 0 0 0 0 0 0 0 0 59590 3360 53590 503011;503012 398964;398965 398965 2 WSNWEIPVSTDGK Unmodified 1517.7151 0.71505795 412;416 O60563;O60583 CCNT1;CCNT2 Cyclin-T1;Cyclin-T2 no no 0 0 0 By MS/MS 2.5 0.5 1 1 2 82.25 78.248 2 0.0047384 97211 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.689 79.86 50012000 0 50012000 0 0 0 0 0 0 0 0 0 0 0 0 0 59591 412;416 53591 503013;503014 398966 398966 1 WSPESPLQAPR Unmodified 1266.6357 0.63568542 3395 Q8NBJ5 COLGALT1 Procollagen galactosyltransferase 1 yes yes 0 0 0 By MS/MS 10 0 1 1 65.005 65.336 2 0.020343 74715 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 42.743 16.698 6206200 0 0 0 0 0 0 0 0 0 0 6206200 0 0 0 0 59592 3395 53592 503015 398967 398967 1 WSPTHEQQLISGSLDNIVK Unmodified 2151.096 0.096032235 4294 Q9GZL7 WDR12 Ribosome biogenesis protein WDR12 yes yes 0 0 0 By MS/MS 2 0 1 1 88.469 80.338 3 7.1336E-06 104572 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 52.498 47.788 28089000 28089000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59593 4294 53593 503016 398968;398969 398969 2 WSSAIQNVTDTK Unmodified 1348.6623 0.6622941 4530 Q9HD67 MYO10 Unconventional myosin-X yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 52.374 52.538 2 0.0080882 60394 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 49.35 29.589 36432000 0 0 0 0 2831700 6020100 2729200 0 4862700 7606300 4050600 4419800 3912000 0 0 59594 4530 53594 503017;503018;503019;503020;503021;503022;503023;503024 398970;398971;398972;398973;398974;398975 398975 6 WSSGVGGSGGGSSGR Unmodified 1293.5698 0.5697907 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 18.897 19.095 2 0.00029715 19610 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 67.153 48.373 73488000 0 0 0 5777800 3402800 7555500 6118700 3358700 4266900 0 5984300 9234900 8585900 6346800 12856000 59595 619 53595 503025;503026;503027;503028;503029;503030;503031;503032;503033;503034;503035 398976;398977;398978;398979;398980;398981;398982;398983;398984 398984 8 WSSLACNIALDAVK Unmodified 1546.7814 0.78136338 1570 P49368 CCT3 T-complex protein 1 subunit gamma yes yes 0 0 0 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 83.064 83.134 2 0.0004451 95895 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.314 73.006 35622000 0 0 0 0 2383900 0 0 4566200 0 0 0 17667000 0 0 11005000 59596 1570 53596 503036;503037;503038;503039 398985 398985 1 WSSNGYFYSGK Unmodified 1294.5619 0.56185177 2203 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 64.664 56.385 2 0.0004657 75927 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.97 87.305 16838000 16838000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59597 2203 53597 503040 398986;398987 398987 2 WSTDDVQINDISLQDYIAVK Unmodified 2322.138 0.13795663 1512 P46782 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 2 2 1 95.141 89.778 2;3 1.1759E-46 113254 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 160.27 147.65 102690000 74609000 25509000 2574100 0 0 0 0 0 0 0 0 0 0 0 0 59598 1512 53598 503041;503042;503043;503044;503045 398988;398989;398990;398991 398990 4 WSTRGSESHELNEGGDEK Unmodified 2016.8773 0.87732527 2833 Q5VZK9 LRRC16A Leucine-rich repeat-containing protein 16A yes yes 0 0 1 By MS/MS 2 0 1 1 29.498 23.878 4 0.00018249 33665 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 61.256 53.264 33159000 33159000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59599 2833 53599 503046 398992 398992 0 WSTTAGFLK Unmodified 1009.5233 0.52328142 3521 Q8TEW0 PARD3 Partitioning defective 3 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 66.285 66.327 2 0.031872 75138 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 47.574 27.652 37474000 0 0 0 3021500 3115700 0 0 2822600 4128000 4692000 5326000 6378600 5013700 2976300 0 59600 3521 53600 503047;503048;503049;503050;503051;503052;503053;503054;503055 398993 398993 1 WSVVEHVGPK Unmodified 1136.5978 0.59784335 2818 Q5VUA4 ZNF318 Zinc finger protein 318 yes yes 0 0 0 By MS/MS 2 0 1 1 57.605 49.424 2 0.055308 67471 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 58.433 41.048 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59601 2818 53601 503056 398994 398994 1 WTAPEALREK Unmodified 1199.6299 0.62987176 1438 P41240 CSK Tyrosine-protein kinase CSK yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 53.458 47.424 3 0.029602 65115 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.998 39.465 133940000 127300000 0 6647700 0 0 0 0 0 0 0 0 0 0 0 0 59602 1438 53602 503057;503058 398995 398995 1 WTAPESLAYNK Unmodified 1278.6245 0.62445203 731 P00519 ABL1 Tyrosine-protein kinase ABL1 yes yes 0 0 0 By MS/MS 2 0 1 1 65.974 60.056 2 0.031447 76874 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 52.579 34.515 15068000 0 15068000 0 0 0 0 0 0 0 0 0 0 0 0 0 59603 731 53603 503059 398996 398996 1 WTAPESLAYNTFSIK Unmodified 1726.8566 0.85663681 1462 P42684 ABL2 Abelson tyrosine-protein kinase 2 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 85.713 85.849 2 0.012696 99361 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.417 27.463 9363000 0 0 0 0 0 1793600 0 1653500 0 0 0 0 0 0 5915900 59604 1462 53604 503060;503061;503062 398997 398997 1 WTCMTVDLEADK Oxidation (M) 1483.6323 0.63231588 645 O95359 TACC2 Transforming acidic coiled-coil-containing protein 2 yes yes 0 1 0 By MS/MS 2 0 1 1 61.69 55.815 2 0.0036233 71733 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.744 64.153 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59605 645 53605 503063 398998 398998 787 1 WTDENIDTVALK Unmodified 1403.6933 0.69325988 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 69.128 69.167 2 8.2966E-06 78713 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 109.42 100.56 191550000 0 0 0 13022000 13130000 18970000 17423000 19439000 11760000 19491000 16797000 24292000 16868000 20356000 0 59606 2392 53606 503064;503065;503066;503067;503068;503069;503070;503071;503072;503073;503074 398999;399000;399001;399002;399003;399004;399005;399006;399007;399008 399005 8 WTEEEMETAK Unmodified 1252.5282 0.52816838 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 37.886 38.099 2 0.02179 41229 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 46.462 41.096 14600000 0 0 0 0 1311700 0 0 2247000 0 0 0 0 3504300 2777500 4759800 59607 5262 53607 503075;503076;503077;503078;503079 399009 399009 1 WTELAGCTADFR Unmodified 1425.6347 0.63469914 2208 Q12907 LMAN2 Vesicular integral-membrane protein VIP36 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.007 68.084 2 3.8648E-05 78004 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 90.827 73.354 62416000 0 0 0 2887500 2915300 5718800 3496800 4417600 5804800 0 5776100 8463400 8135700 5032400 9767400 59608 2208 53608 503080;503081;503082;503083;503084;503085;503086;503087;503088;503089;503090;503091 399010;399011;399012;399013;399014;399015;399016;399017;399018;399019;399020 399018 11 WTETYVR Unmodified 953.46068 0.46068117 1776 P55884 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 40.056 40.221 2 0.049926 43439 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.287 24.451 198290000 0 0 0 14123000 8834300 11014000 10090000 9155000 9106800 15994000 25133000 32925000 0 20153000 41762000 59609 1776 53609 503092;503093;503094;503095;503096;503097;503098;503099;503100;503101;503102 399021 399021 1 WTFEACRQIN Unmodified 1323.603 0.60300508 2584 Q15818 NPTX1 Neuronal pentraxin-1 yes yes 0 0 1 By MS/MS 2 0 1 1 71.999 63.761 2 0.014003 84674 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 112.94 88.309 9193400 9193400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59610 2584 53610 503103 399022 399022 0 WTGMIIGPPR Unmodified 1126.5957 0.59573486 2585;2279 Q13404;Q15819 UBE2V1;UBE2V2 Ubiquitin-conjugating enzyme E2 variant 1;Ubiquitin-conjugating enzyme E2 variant 2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.598 76.645 2 0.0023495 88932 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 84.498 76.558 142910000 0 0 0 4412900 2353100 16201000 5850200 0 3598600 12839000 14714000 14622000 5828900 13346000 49148000 59611 2279;2585 53611 503104;503105;503106;503107;503108;503109;503110;503111;503112;503113;503114 399023;399024;399025;399026;399027;399028;399029;399030;399031;399032;399033 399032 9 WTGMIIGPPR Oxidation (M) 1142.5906 0.59064948 2585;2279 Q13404;Q15819 UBE2V1;UBE2V2 Ubiquitin-conjugating enzyme E2 variant 1;Ubiquitin-conjugating enzyme E2 variant 2 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 63.353 63.574 2 0.0010705 72628 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 104.44 96.206 116980000 0 0 0 0 0 22642000 10626000 6431000 4701700 17853000 0 17414000 2586600 11015000 23709000 59612 2279;2585 53611 503115;503116;503117;503118;503119;503120;503121;503122;503123 399034;399035;399036;399037;399038;399039;399040 399036 3711 3 WTLAVPGR Unmodified 898.50249 0.5024864 4245 Q9BYB4 GNB1L Guanine nucleotide-binding protein subunit beta-like protein 1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 70.087 70.199 2 0.014173 80100 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.912 61.672 12319000 0 0 0 1019600 0 0 0 0 2037400 0 0 3492800 0 2089900 3679700 59613 4245 53612 503124;503125;503126;503127;503128 399041;399042 399041 2 WTLLQEQGTK Unmodified 1202.6295 0.62953741 74;66;58;779 P04259;CON__P13647;P13647;CON__P02538;P02538;CON__P04259 KRT6B;KRT5;KRT6A Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 6A no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.52 3.05 3 1 17 1 2 1 4 1 1 1 2 1 1 1 1 2 1 1 64.186 62.967 2 1.7018E-23 71403 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 175.51 159.31 + 10286000000 83805000 241490000 10089000 2469100000 420570000 513820000 414770000 1488000000 318850000 683960000 676850000 778340000 1538700000 331030000 317040000 59614 779;74;58;66 53613 503129;503130;503131;503132;503133;503134;503135;503136;503137;503138;503139;503140;503141;503142;503143;503144;503145;503146;503147;503148;503149 399043;399044;399045;399046;399047;399048;399049;399050;399051;399052;399053;399054;399055;399056;399057;399058;399059;399060;399061;399062;399063;399064;399065;399066;399067;399068;399069;399070 399064 26 WTLLQEQK Unmodified 1044.5604 0.56039521 69;88 CON__P08729;CON__Q3KNV1;P08729 KRT7 Keratin, type II cytoskeletal 7 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62.477 61.363 2 0.0046104 69991 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 133.81 100.3 + 508890000 24604000 33959000 4452200 21197000 34075000 34321000 29754000 48945000 23715000 38712000 46582000 53051000 33428000 28035000 54063000 59615 69;88 53614 503150;503151;503152;503153;503154;503155;503156;503157;503158;503159;503160;503161;503162;503163;503164 399071;399072;399073;399074;399075;399076;399077;399078;399079;399080;399081;399082;399083;399084 399081 6 WTLVNDETQAK Unmodified 1303.6408 0.64083038 1454 P42345 MTOR Serine/threonine-protein kinase mTOR yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 58.997 53.657 2 0.016639 68486 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.282 76.282 97215000 0 97215000 0 0 0 0 0 0 0 0 0 0 0 0 0 59616 1454 53615 503165;503166 399085 399085 1 WTNIPLLVK Unmodified 1082.6488 0.64881629 3946 Q96P70 IPO9 Importin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 83.732 83.796 2 0.0037345 97177 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 101.33 94.205 269770000 0 0 0 7055300 9750900 46748000 13050000 15982000 10990000 31968000 24951000 21184000 14419000 19524000 54145000 59617 3946 53616 503167;503168;503169;503170;503171;503172;503173;503174;503175;503176;503177;503178 399086;399087;399088;399089;399090;399091;399092;399093 399086 8 WTNQLNSLNQAVVSK Unmodified 1700.8846 0.8845829 1838 P61201 COPS2 COP9 signalosome complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.12 3.79 4 1 3 2 3 1 1 1 74.19 70.62 2;3 2.4791E-40 90601 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 187.44 162.59 439750000 145680000 191010000 0 0 0 0 0 0 0 0 27232000 31000000 0 0 44828000 59618 1838 53617 503179;503180;503181;503182;503183;503184;503185;503186 399094;399095;399096;399097;399098;399099;399100 399098 6 WTPIEYFNNK Unmodified 1310.6295 0.62953741 2215 Q12965 MYO1E Unconventional myosin-Ie yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.551 80.612 2 0.001832 92867 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 116.25 105.44 72119000 0 0 0 1701900 2309400 6129800 2761500 5155400 4466300 6006200 6946800 8616600 3599300 4667400 19758000 59619 2215 53618 503187;503188;503189;503190;503191;503192;503193;503194;503195;503196;503197;503198 399101;399102;399103;399104;399105;399106;399107;399108;399109;399110;399111;399112 399104 12 WTPVGMADLVAPEQVK Oxidation (M) 1755.8866 0.88655673 234 O14976 GAK Cyclin-G-associated kinase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 77.86 77.899 2 1.1968E-10 90078 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 95.094 82.478 71855000 0 0 0 4782500 5609600 8134100 6890600 9907000 0 8330600 6772000 8220000 6052800 0 7155300 59620 234 53619 503199;503200;503201;503202;503203;503204;503205;503206;503207;503208;503209 399113;399114;399115;399116;399117;399118;399119;399120;399121;399122;399123;399124 399118 314 12 WTPVGMADLVAPEQVK Unmodified 1739.8916 0.89164211 234 O14976 GAK Cyclin-G-associated kinase yes yes 0 0 0 By MS/MS 10 0 1 1 87.318 87.514 2 0.015267 101470 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 48.568 34.759 3278300 0 0 0 0 0 0 0 3278300 0 0 0 0 0 0 0 59621 234 53619 503210 399125 399125 0 WTPVGPAPSTSQSQK Unmodified 1569.7787 0.77872084 4894 Q9UHB7 AFF4 AF4/FMR2 family member 4 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.64 2.9 1 1 9 2 1 1 1 1 1 1 1 1 1 47.17 46.348 2 0.00057189 58730 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.839 75.975 55100000 0 17406000 0 2796600 2038000 0 2944400 0 3325600 0 4722400 7673600 5038900 3957300 5196800 59622 4894 53620 503211;503212;503213;503214;503215;503216;503217;503218;503219;503220;503221 399126;399127;399128;399129;399130 399127 5 WTSQDSLLGMEFSGR Oxidation (M) 1728.7777 0.77773456 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 77.988 78.146 2 4.1886E-10 89762 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.183 88.21 148550000 0 0 0 0 0 39130000 6906100 0 8641800 0 15441000 20225000 0 18029000 40180000 59623 1565 53621 503222;503223;503224;503225;503226;503227;503228 399131;399132;399133;399134;399135;399136;399137 399133 2506 7 WTSQDSLLGMEFSGRDASGK Unmodified 2170.9953 0.99533191 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 83.406 78.285 3 3.0958E-47 99722 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 130 120.74 141920000 41735000 96929000 3257100 0 0 0 0 0 0 0 0 0 0 0 0 59624 1565 53622 503229;503230;503231 399138;399139;399140;399141 399139 4 WTSQDSLLGMEFSGRDASGK Oxidation (M) 2186.9902 0.99024653 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 76.91 71.421 3 3.3212E-16 91376 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.405 64.911 55099000 37629000 0 17469000 0 0 0 0 0 0 0 0 0 0 0 0 59625 1565 53622 503232;503233;503234 399142;399143;399144 399142 2506 3 WTSQHSNTQTLGK Unmodified 1486.7165 0.71645494 2961 Q6PKG0 LARP1 La-related protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 6 12 2 2 2 1 1 1 1 1 1 1 1 1 1 1 1 19.628 18.442 2;3 0.017371 23586 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 43.308 26.637 610360000 401640000 43139000 32989000 8693200 9797000 9041600 7865500 10773000 9541600 15729000 8928500 13027000 11037000 8873300 19289000 59626 2961 53623 503235;503236;503237;503238;503239;503240;503241;503242;503243;503244;503245;503246;503247;503248;503249;503250;503251;503252 399145;399146;399147;399148;399149;399150 399148 5 WTTEEQLLAVQAIRK Unmodified 1784.9785 0.97848328 4971 Q9UKL0 RCOR1 REST corepressor 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 78.107 78.233 3 1.1013E-05 89985 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.279 67.52 48112000 0 0 0 0 0 14357000 0 0 0 0 0 0 0 9005900 24749000 59627 4971 53624 503253;503254;503255;503256 399151;399152;399153;399154 399152 4 WVAIQSVSAWPEK Unmodified 1499.7773 0.77726428 3910 Q96KP4 CNDP2 Cytosolic non-specific dipeptidase yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 85.432 80.145 2 6.1271E-21 102702 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 138.71 114.37 62250000 57264000 0 4985800 0 0 0 0 0 0 0 0 0 0 0 0 59628 3910 53625 503257;503258 399155;399156 399155 2 WVAVVVPSGQEQR Unmodified 1453.7678 0.76776223 754 P01891 HLA-A HLA class I histocompatibility antigen, A-68 alpha chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 67.926 68.07 2 0.0007354 77874 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 71.349 63.114 64868000 0 0 0 0 3622500 6411000 3981100 0 4032900 6495100 5894600 11726000 6880000 6126100 9699300 59629 754 53626 503259;503260;503261;503262;503263;503264;503265;503266;503267;503268 399157;399158;399159;399160;399161;399162;399163;399164;399165;399166;399167 399162 11 WVCAQPSSQK Unmodified 1189.555 0.55499226 4886 Q9UGP5 POLL DNA polymerase lambda yes yes 0 0 0 By MS/MS 2 0 1 1 27.751 23.445 2 0.014232 30874 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.812 42.682 10668000 0 10668000 0 0 0 0 0 0 0 0 0 0 0 0 0 59630 4886 53627 503269 399168 399168 1 WVDEVVPAAPYVTTLETLDK Unmodified 2245.1518 0.15181578 4009 Q99447 PCYT2 Ethanolamine-phosphate cytidylyltransferase yes yes 0 0 0 By MS/MS 2 0 1 1 98.317 93.583 2 4.9115E-08 115614 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 111.35 89.024 40922000 0 40922000 0 0 0 0 0 0 0 0 0 0 0 0 0 59631 4009 53628 503270 399169 399169 1 WVDLTMDDIRRMEEETK Unmodified 2166.0085 0.0085391359 2031 Q00169 PITPNA Phosphatidylinositol transfer protein alpha isoform yes yes 0 0 2 By MS/MS 2 0 1 1 89.652 81.522 3 0.043079 105978 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 28.212 19.717 13108000 13108000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59632 2031 53629 503271 399170 399170 0 WVDWTVSEPR Unmodified 1273.6091 0.60913632 3258 Q8IXH7 NELFCD Negative elongation factor C/D yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 74.063 74.222 2 0.026327 84953 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.318 29.174 49221000 0 0 0 0 0 5763200 2844400 6837200 3428400 6760400 0 6838300 3677300 3704800 9367300 59633 3258 53630 503272;503273;503274;503275;503276;503277;503278;503279;503280;503281 399171;399172;399173;399174;399175;399176;399177 399173 7 WVEISNEVR Unmodified 1130.572 0.57202253 1053 P17480 UBTF Nucleolar transcription factor 1 yes yes 0 0 0 By MS/MS By matching By matching By matching 10 0 4 1 1 1 1 56.735 57.143 2 0.02741 65271 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 49.418 15.245 28227000 0 0 0 0 0 4160100 0 0 0 0 4991000 14425000 0 0 4650900 59634 1053 53631 503282;503283;503284;503285 399178 399178 1 WVEISNEVRK Unmodified 1258.667 0.66698555 1053 P17480 UBTF Nucleolar transcription factor 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.3 2.25 2 21 1 1 2 2 1 2 2 1 2 2 1 2 2 2 46.407 46.018 2;3 0.0016599 64569 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.85 70.817 662620000 43476000 0 9775300 38050000 35349000 50825000 40931000 39264000 27366000 51899000 53825000 104980000 52629000 37984000 76268000 59635 1053 53632 503286;503287;503288;503289;503290;503291;503292;503293;503294;503295;503296;503297;503298;503299;503300;503301;503302;503303;503304;503305;503306;503307;503308 399179;399180;399181;399182;399183;399184;399185;399186;399187;399188;399189 399184 11 WVENNTNNLVK Unmodified 1329.6677 0.66771383 4025 Q99574 SERPINI1 Neuroserpin yes yes 0 0 0 By MS/MS 2 0 1 1 73.318 67.773 2 0.0056559 85749 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.233 52.93 67305000 0 67305000 0 0 0 0 0 0 0 0 0 0 0 0 0 59636 4025 53633 503309 399190 399190 1 WVGVILDEAK Unmodified 1128.6179 0.61791009 2391 Q14203 DCTN1 Dynactin subunit 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 79.54 76.967 2 0.010734 93408 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 73.985 54.198 41513000 0 0 41513000 0 0 0 0 0 0 0 0 0 0 0 0 59637 2391 53634 503310;503311 399191;399192 399192 2 WVHAEMVNK Oxidation (M) 1128.5386 0.53861391 1496 P46063 RECQL ATP-dependent DNA helicase Q1 yes yes 0 1 0 By MS/MS 2 0 1 1 26.91 21.521 2 0.036061 30316 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.074 44.693 10458000 10458000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59638 1496 53635 503312 399193 399193 1 WVHAEMVNK Unmodified 1112.5437 0.54369929 1496 P46063 RECQL ATP-dependent DNA helicase Q1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 38.982 33.926 2 0.0010052 47817 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 141.93 111.43 115170000 105850000 0 9315600 0 0 0 0 0 0 0 0 0 0 0 0 59639 1496 53635 503313;503314 399194;399195;399196;399197 399196 4 WVLTGTPIQNSLK Unmodified 1455.8086 0.80856441 2411 Q14527 HLTF Helicase-like transcription factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.171 81.231 2 1.2319E-12 94217 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 142.83 121.36 372040000 0 0 0 5631600 17400000 30373000 18855000 37623000 23772000 37602000 31886000 38571000 25843000 23130000 81355000 59640 2411 53636 503315;503316;503317;503318;503319;503320;503321;503322;503323;503324;503325;503326 399198;399199;399200;399201;399202;399203;399204;399205;399206;399207;399208;399209;399210;399211;399212;399213 399208 16 WVPEITHHCPK Unmodified 1402.6816 0.68158975 1821 P60953 CDC42 Cell division control protein 42 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.29 3.65 3 2 9 2 2 1 1 1 1 1 1 1 1 1 1 41.961 40.497 3 0.0017242 43963 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 57.019 39.211 207310000 67968000 5202600 2576700 0 0 8201200 6914500 7938100 9357100 0 21909000 15576000 14502000 20549000 26617000 59641 1821 53637 503327;503328;503329;503330;503331;503332;503333;503334;503335;503336;503337;503338;503339;503340 399214;399215;399216;399217;399218;399219;399220;399221;399222;399223;399224;399225;399226 399222 12 WVPENSEIVWSIK Unmodified 1585.814 0.81404372 4232 Q9BXS5 AP1M1 AP-1 complex subunit mu-1 yes yes 0 0 0 By MS/MS 2 0 1 1 87.903 85.469 2 0.010833 103301 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 58.699 33.482 3227500 0 0 3227500 0 0 0 0 0 0 0 0 0 0 0 0 59642 4232 53638 503341 399227 399227 1 WVPPAASGGSR Unmodified 1083.5461 0.54614213 3746 Q96B01 RAD51AP1 RAD51-associated protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 36.43 36.487 2 0.037967 40467 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 55.064 46.881 22136000 0 0 0 0 0 0 22136000 0 0 0 0 0 0 0 0 59643 3746 53639 503342 399228 399228 0 WVPVTDSK Unmodified 930.48108 0.48108226 4095 Q9BQE9 BCL7B B-cell CLL/lymphoma 7 protein family member B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 37.791 37.184 2 0.025333 40705 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 58.782 27.724 141540000 0 68402000 0 4286200 5931800 4518000 4557300 4369700 4061900 9131800 7730700 9618900 7718400 0 11215000 59644 4095 53640 503343;503344;503345;503346;503347;503348;503349;503350;503351;503352;503353;503354;503355 399229;399230 399230 2 WVQVSHVFR Unmodified 1156.6142 0.61416212 3019 Q6ZVX7 NCCRP1 F-box only protein 50 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching 10 0 5 1 1 1 1 1 59.184 59.264 3 0.037528 68776 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 34.721 31.869 17355000 0 0 0 6598900 0 0 0 5076700 1187400 0 0 3097300 1395200 0 0 59645 3019 53641 503356;503357;503358;503359;503360 399231 399231 1 WVSSLAVHPAGDNVICGSYDSK Unmodified 2361.1059 0.10594499 2372 Q14137 BOP1 Ribosome biogenesis protein BOP1 yes yes 0 0 0 By MS/MS 2 0 1 1 80.175 72.044 3 2.7449E-14 94560 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.884 59.897 18137000 18137000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59646 2372 53642 503361 399232 399232 1 WVTTASLLDYDTVAGADK Unmodified 1924.9418 0.941823 2528 Q15393 SF3B3 Splicing factor 3B subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 86.016 86.123 2 2.7146E-37 99539 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 155.98 143.21 93835000 0 0 0 0 3104700 3354600 3114100 6234800 4632400 12352000 7830800 12183000 3319600 7220300 30489000 59647 2528 53643 503362;503363;503364;503365;503366;503367;503368;503369;503370;503371;503372 399233;399234;399235;399236;399237;399238;399239;399240;399241;399242;399243;399244;399245 399237 13 WVVPVLPK Unmodified 936.57967 0.57967409 3701;164 O00507;Q93008 USP9Y;USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-Y;Probable ubiquitin carboxyl-terminal hydrolase FAF-X no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.299 82.36 2 0.024817 95251 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 59.205 54.523 145650000 0 0 0 4411200 5967100 13953000 6647800 8718700 4644600 12517000 10559000 11296000 8915300 18793000 39229000 59648 164;3701 53644 503373;503374;503375;503376;503377;503378;503379;503380;503381;503382;503383;503384 399246;399247;399248;399249;399250;399251;399252;399253;399254;399255 399246 10 WWEQTDLTK Unmodified 1205.5717 0.57168818 4468 Q9H9A6 LRRC40 Leucine-rich repeat-containing protein 40 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.903 63.995 2 0.0051651 73076 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 81.594 69.547 167880000 0 0 0 7842200 7081300 16873000 10118000 10420000 10394000 12836000 17613000 17944000 15639000 14654000 26469000 59649 4468 53645 503385;503386;503387;503388;503389;503390;503391;503392;503393;503394;503395;503396 399256;399257;399258;399259;399260;399261;399262;399263;399264;399265;399266;399267 399257 11 WYLATSDK Unmodified 982.476 0.47599688 1866 P61966 AP1S1 AP-1 complex subunit sigma-1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 51.781 49.839 2 0.014414 55357 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.525 54.893 62787000 35536000 0 0 0 3430200 0 0 0 0 0 0 0 0 7697400 16124000 59650 1866 53646 503397;503398;503399;503400 399268;399269;399270;399271 399268 4 WYMQFDDDEK Oxidation (M) 1391.534 0.53398204 1725 P53680 AP2S1 AP-2 complex subunit sigma yes yes 0 1 0 By MS/MS 2 0 1 1 55.29 49.476 2 0.003068 63980 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.309 83.48 31779000 0 31779000 0 0 0 0 0 0 0 0 0 0 0 0 0 59651 1725 53647 503401 399272 399272 2806 1 WYMQFDDDEK Unmodified 1375.5391 0.53906742 1725 P53680 AP2S1 AP-2 complex subunit sigma yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 6.8 3.92 2 3 1 1 1 1 1 73.364 70.884 2 0.0058123 90877 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.331 91.366 32388000 11440000 10958000 0 0 0 2320300 0 0 0 0 2800200 0 0 0 4869800 59652 1725 53647 503402;503403;503404;503405;503406 399273;399274;399275 399275 3 WYPVVTPNPK Unmodified 1199.6339 0.63389451 2826 Q5VWQ8 DAB2IP Disabled homolog 2-interacting protein yes yes 0 0 0 By MS/MS 2 0 1 1 74.282 66.152 2 0.03361 87511 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.673 42.803 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59653 2826 53648 503407 399276 399276 1 WYQMGAYQPFFR Oxidation (M) 1608.7184 0.71836919 2441 Q14697 GANAB Neutral alpha-glucosidase AB yes yes 0 1 0 By MS/MS 10 0 1 1 80.425 80.655 2 1.5889E-05 92854 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 101.72 91.768 8100800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8100800 59654 2441 53649 503408 399277 399277 4007 1 WYVPLSDK Unmodified 1006.5124 0.51238239 1783 P56377 AP1S2 AP-1 complex subunit sigma-2 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 76.554 71.046 2 0.020925 89640 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.212 69.831 58110000 28090000 30020000 0 0 0 0 0 0 0 0 0 0 0 0 0 59655 1783 53650 503409;503410;503411 399278;399279 399278 2 WYYFDDSSVSTASEDQIVSK Unmodified 2326.0277 0.027737478 5198 Q9Y4E8 USP15 Ubiquitin carboxyl-terminal hydrolase 15 yes yes 0 0 0 By MS/MS 2 0 1 1 85.291 80.547 2 1.1109E-59 100143 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 170.52 161.69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59656 5198 53651 503412 399280 399280 1 YAACGSPEEVLQAEQEFLANAK Unmodified 2424.1267 0.12674002 4939 Q9UJK0 TSR3 Ribosome biogenesis protein TSR3 homolog yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 96.425 92.126 2;3 5.6802E-40 114100 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.352 83.689 58218000 0 58218000 0 0 0 0 0 0 0 0 0 0 0 0 0 59657 4939 53652 503413;503414;503415 399281;399282;399283;399284 399281 3 YAACNAVGQMATDFAPGFQK Oxidation (M) 2161.9561 0.95610963 149 O00410 IPO5 Importin-5 yes yes 0 1 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 2 1 1 1 1 1 72.368 72.449 2;3 1.1211E-12 83546 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 74.987 69.672 53457000 0 0 0 0 2384100 10520000 5208300 0 0 14054000 8535000 0 0 0 12755000 59658 149 53653 503416;503417;503418;503419;503420;503421;503422;503423 399285;399286;399287;399288;399289 399287 209 4 YAACNAVGQMATDFAPGFQK Unmodified 2145.9612 0.96119501 149 O00410 IPO5 Importin-5 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 2 83.047 83.204 2;3 4.229E-15 96028 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.767 84.047 54518000 0 0 0 0 0 3692100 0 2865400 3498300 0 0 0 0 0 44463000 59659 149 53653 503424;503425;503426;503427;503428 399290;399291;399292 399291 3 YAADRNHYR Unmodified 1164.5425 0.54245374 1955 P67809 YBX1 Nuclease-sensitive element-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 2 2 1 1 1 2 2 6.803 6.96 3 4.4344E-06 4630 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 144.09 144.09 2103500000 0 0 0 93337000 0 157270000 132560000 114890000 171400000 240130000 0 229170000 422690000 238910000 303120000 59660 1955 53654 503429;503430;503431;503432;503433;503434;503435;503436;503437;503438;503439;503440;503441;503442 399293;399294;399295;399296;399297;399298;399299;399300;399301 399297 3 YAADRNHYRR Unmodified 1320.6436 0.64356476 1955 P67809 YBX1 Nuclease-sensitive element-binding protein 1 yes yes 0 0 2 By MS/MS 10 0 1 1 6.446 6.6392 3 0.030097 4667 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 75.378 65.946 9767500 0 0 0 0 0 0 0 0 0 0 0 0 9767500 0 0 59661 1955 53655 503443 399302 399302 1 YAAIDPSMVSAEELEVQK Unmodified 1978.9558 0.95575851 4765 Q9NZD8 SPG21 Maspardin yes yes 0 0 0 By MS/MS 2 0 2 2 84.604 79.861 2;3 1.5631E-05 99355 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.87 100.77 228490000 0 228490000 0 0 0 0 0 0 0 0 0 0 0 0 0 59662 4765 53656 503444;503445 399303;399304 399303 1 YAAIDPSMVSAEELEVQK Oxidation (M) 1994.9507 0.95067313 4765 Q9NZD8 SPG21 Maspardin yes yes 0 1 0 By MS/MS 2 0 1 1 79.103 74.368 2 1.6214E-10 92690 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.224 70.088 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59663 4765 53656 503446 399305 399305 6135 1 YAAISSSEQR Unmodified 1110.5306 0.53055165 1760 P55199 ELL RNA polymerase II elongation factor ELL yes yes 0 0 0 By MS/MS 10 0 1 1 19.593 20.109 2 0.031631 20319 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 57.59 34.57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59664 1760 53657 503447 399306 399306 1 YAAISSSEQRQSYK Unmodified 1616.7794 0.77944912 1760 P55199 ELL RNA polymerase II elongation factor ELL yes yes 0 0 1 By MS/MS 2 0 1 1 30.092 24.471 3 0.0010227 34347 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.267 44.982 18424000 18424000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59665 1760 53658 503448 399307 399307 1 YAALSDQGLDIK Unmodified 1292.6612 0.66123147 3581 Q8WX93 PALLD Palladin yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.921 65.008 2 2.4137E-05 75126 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 101.38 81.051 556070000 0 0 0 31152000 25642000 36136000 41789000 34468000 33697000 52978000 52913000 53093000 41011000 47868000 105320000 59666 3581 53659 503449;503450;503451;503452;503453;503454;503455;503456;503457;503458;503459;503460 399308;399309;399310;399311;399312;399313;399314;399315;399316;399317;399318 399317 10 YAALSVDGEDENEGEDYAE Unmodified 2074.8127 0.8127189 1166 P23588 EIF4B Eukaryotic translation initiation factor 4B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.323 65.411 2 1.9824E-05 74235 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.64 64.64 115810000 0 0 0 3427200 4848800 3386700 4155000 6672600 4576900 5716000 17942000 23331000 4302200 12397000 25053000 59667 1166 53660 503461;503462;503463;503464;503465;503466;503467;503468;503469;503470;503471;503472 399319;399320 399319 1 YAALVVEPTSDGNYVTK Unmodified 1825.9098 0.90979459 895 P09884 POLA1 DNA polymerase alpha catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.53 2.94 1 2 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 71.151 70.332 2 2.3193E-18 79998 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 125.22 116.21 609540000 327530 445500000 0 6418700 7855100 15252000 13188000 10926000 6462500 16350000 18148000 15078000 11488000 15537000 27009000 59668 895 53661 503473;503474;503475;503476;503477;503478;503479;503480;503481;503482;503483;503484;503485;503486;503487 399321;399322;399323;399324;399325;399326;399327;399328;399329;399330;399331;399332;399333;399334 399330 14 YAALYQPLFDK Unmodified 1327.6812 0.68123863 4057 Q99733 NAP1L4 Nucleosome assembly protein 1-like 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 81.15 79.952 2 1.2389E-06 97329 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 123.35 110.73 2352600000 996890000 918040000 76686000 12137000 11307000 1055800 20839000 20688000 16229000 0 40173000 48157000 28303000 38097000 123970000 59669 4057 53662 503488;503489;503490;503491;503492;503493;503494;503495;503496;503497;503498;503499;503500;503501;503502 399335;399336;399337;399338;399339;399340;399341;399342;399343;399344;399345;399346;399347;399348;399349;399350;399351;399352 399347 11 YAAPEQNNDPQQSK Unmodified 1588.7118 0.71176349 3467 Q8NI36 WDR36 WD repeat-containing protein 36 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 17.609 17.797 2 4.4954E-06 17959 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 90.685 72.374 72451000 0 0 0 3717800 3046200 5949000 3507900 5667200 4820300 6402000 6176500 13625000 8357600 5468800 5713600 59670 3467 53663 503503;503504;503505;503506;503507;503508;503509;503510;503511;503512;503513;503514 399353;399354;399355;399356;399357;399358;399359 399356 7 YAAQENLEYNVEPQEISHPDVGR Unmodified 2657.2358 0.23577319 608 O94952 FBXO21 F-box only protein 21 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 70.864 70.953 3 4.4596E-07 81072 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.342 50.8 16956000 0 0 0 0 1383600 0 0 0 0 4585200 5456200 0 0 0 5531300 59671 608 53664 503515;503516;503517;503518 399360;399361;399362 399361 3 YAASSYLSLTPEQWK Unmodified 1742.8516 0.85155143 911;43 P0DOY3;P0DOY2;P0CF74;A0M8Q6;B9A064;P0CG04 IGLC6;IGLC7;IGLL5;IGLC1 Ig lambda-6 chain C region;Ig lambda-7 chain C region;Immunoglobulin lambda-like polypeptide 5;Ig lambda-1 chain C regions no no 0 0 0 By matching By MS/MS By matching 10 0 3 1 1 1 83.001 82.966 2 1.1642E-05 95967 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 80.014 69.109 45521000 0 0 0 1940600 0 0 0 15450000 0 28131000 0 0 0 0 0 59672 911;43 53665 503519;503520;503521 399363 399363 1 YAATSQVLLPSK Unmodified 1276.7027 0.70270235 750 P01871 IGHM Ig mu chain C region yes yes 0 0 0 By MS/MS 10 0 1 1 56.302 56.471 2 0.0035233 64048 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 73.499 52.598 28339000 0 0 0 0 0 0 0 28339000 0 0 0 0 0 0 0 59673 750 53666 503522 399364 399364 1 YAAVTQFEATDAR Unmodified 1441.6838 0.68375782 1771 P55786;A6NEC2 NPEPPS;NPEPPSL1 Puromycin-sensitive aminopeptidase;Puromycin-sensitive aminopeptidase-like protein yes no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 54.383 54.611 2 0.0007354 63036 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 71.349 50.479 49210000 0 0 0 8894100 0 0 0 0 0 1565600 8670000 8091400 0 4294300 17695000 59674 1771 53667 503523;503524;503525;503526;503527;503528 399365;399366;399367;399368;399369 399369 5 YAAVTQFEATDARR Unmodified 1597.7849 0.78486885 1771 P55786;A6NEC2 NPEPPS;NPEPPSL1 Puromycin-sensitive aminopeptidase;Puromycin-sensitive aminopeptidase-like protein yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 47.59 47.763 3 0.0071832 52584 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 23.398 12.763 126610000 0 0 0 15650000 2901600 4593700 0 3851800 2670500 0 13336000 18538000 5991400 13588000 45493000 59675 1771 53668 503529;503530;503531;503532;503533;503534;503535;503536;503537;503538 399370;399371;399372;399373;399374 399370 5 YADDIDMPGQNFDSK Unmodified 1714.7145 0.7144656 652 O95391 SLU7 Pre-mRNA-splicing factor SLU7 yes yes 0 0 0 By MS/MS 2 0 1 1 68.269 62.37 2 3.1614E-05 79650 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.641 76.735 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59676 652 53669 503539 399375 399375 1 YADEEIPRSPFK Unmodified 1450.7092 0.70924429 487 O75369 FLNB Filamin-B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58.16 57.048 3 0.00090094 70505 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 93.345 81.426 363040000 27073000 35555000 152500000 11367000 3958300 14217000 10365000 0 7123700 10956000 18631000 19329000 8105600 14732000 29125000 59677 487 53670 503540;503541;503542;503543;503544;503545;503546;503547;503548;503549;503550;503551;503552;503553;503554 399376;399377;399378;399379;399380;399381;399382;399383;399384;399385;399386 399380 8 YADFIEANRK Unmodified 1225.6091 0.60913632 2776 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 40.126 40.271 3 0.0031697 45376 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 45.598 36.64 58771000 0 0 0 5275400 5831800 9803700 0 0 7341900 0 0 11918000 8864100 0 9736000 59678 2776 53671 503555;503556;503557;503558;503559;503560;503561 399387;399388;399389;399390;399391;399392 399392 5 YADGPQLYITEQTR Unmodified 1653.7999 0.79985021 3895 Q96JJ3 ELMO2 Engulfment and cell motility protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.039 67.121 2 2.8424E-23 76975 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 150.94 133.57 66274000 0 0 0 2469200 3113100 6151000 5034800 3666800 4297100 5382900 7958500 7416800 5901200 5200500 9681800 59679 3895 53672 503562;503563;503564;503565;503566;503567;503568;503569;503570;503571;503572;503573 399393;399394;399395;399396;399397;399398;399399;399400;399401;399402;399403;399404;399405;399406 399394 14 YADIFPSK Unmodified 939.47018 0.47018322 3968 Q96RK0 CIC Protein capicua homolog yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 54.1 54.174 2 0.043878 61613 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 49.097 24.174 56724000 0 0 0 2642800 2925300 4856500 4945900 0 5655600 0 7339000 0 11314000 7097600 9947300 59680 3968 53673 503574;503575;503576;503577;503578;503579;503580;503581;503582 399407 399407 1 YADLLEESRSVQK Unmodified 1536.7784 0.77838649 4652 Q9NUQ3 TXLNG Gamma-taxilin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 2 2 58.465 53.14 2;3 1.5523E-05 68581 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.506 52.319 158340000 17682000 22198000 118460000 0 0 0 0 0 0 0 0 0 0 0 0 59681 4652 53674 503583;503584;503585;503586;503587 399408;399409;399410;399411 399408 2 YADLLLEK Unmodified 963.5277 0.5276981 4010 Q99459 CDC5L Cell division cycle 5-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 63.398 63.035 2 0.0093228 72245 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 83.265 49.468 1574300000 0 1350000000 0 18903000 14865000 16837000 17000000 12202000 11842000 19637000 23279000 23202000 20887000 15861000 29768000 59682 4010 53675 503588;503589;503590;503591;503592;503593;503594;503595;503596;503597;503598;503599;503600 399412;399413;399414;399415;399416;399417;399418;399419;399420;399421;399422;399423;399424;399425;399426 399422 15 YADLPGIAR Unmodified 974.51853 0.5185304 2317 Q13561 DCTN2 Dynactin subunit 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 56.732 56.862 2 0.0038251 63880 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.45 65.202 265900000 0 0 0 15764000 12539000 0 18307000 18250000 14071000 25590000 34953000 34794000 21008000 22395000 48229000 59683 2317 53676 503601;503602;503603;503604;503605;503606;503607;503608;503609;503610;503611 399427;399428;399429;399430;399431;399432;399433;399434;399435 399428 9 YADLSHNR Unmodified 974.45699 0.45699277 1733 P54136 RARS Arginine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 10.714 10.92 2 0.012232 8687 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.109 44.606 48689000 0 0 0 0 0 5293500 0 3383600 2885000 6655000 4955700 0 7623000 9324400 8569000 59684 1733 53677 503612;503613;503614;503615;503616;503617;503618;503619 399436;399437 399436 2 YADLTEDQLPSCESLK Unmodified 1867.851 0.85095909 1077 P18669 PGAM1 Phosphoglycerate mutase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 70.539 69.11 2;3 4.1717E-71 79253 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 219.42 206.92 1322700000 17691000 507170000 0 20359000 9121200 12657000 12340000 11240000 10870000 23050000 100420000 145050000 21424000 85936000 345340000 59685 1077 53678 503620;503621;503622;503623;503624;503625;503626;503627;503628;503629;503630;503631;503632;503633;503634;503635 399438;399439;399440;399441;399442;399443;399444;399445;399446;399447;399448;399449;399450;399451;399452;399453;399454 399443 17 YADSPGASSPEQPK Unmodified 1432.647 0.64703797 1322 P32519 ELF1 ETS-related transcription factor Elf-1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 21.867 22.028 2 0.00016935 22965 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 81.865 53.466 28630000 0 0 0 4133200 0 2973400 3432500 0 3085200 5588000 0 4542200 4875600 0 0 59686 1322 53679 503636;503637;503638;503639;503640;503641;503642 399455;399456;399457 399455 3 YADVIIPR Unmodified 945.52837 0.5283668 4277;4480 Q9BZX2;Q9HA47 UCK2;UCK1 Uridine-cytidine kinase 2;Uridine-cytidine kinase 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.513 58.628 2 0.006015 66811 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 104.45 77.846 1018900000 0 0 0 50302000 48755000 63855000 82167000 73584000 68653000 77369000 131260000 138970000 106610000 64337000 113030000 59687 4277;4480 53680 503643;503644;503645;503646;503647;503648;503649;503650;503651;503652;503653;503654 399458;399459;399460;399461;399462;399463;399464;399465;399466;399467;399468;399469;399470;399471;399472;399473;399474;399475 399469 18 YAEAETLYK Unmodified 1086.5233 0.523341 4629 Q9NSK0 KLC4 Kinesin light chain 4 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 42.173 37.257 2 0.014201 48248 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.279 66.898 110810000 0 110810000 0 0 0 0 0 0 0 0 0 0 0 0 0 59688 4629 53681 503655;503656 399476 399476 1 YAEALDYHR Unmodified 1136.5251 0.52507234 2226 Q13042 CDC16 Cell division cycle protein 16 homolog yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 32.525 32.763 2 0.0031541 36016 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 92.439 58.643 53049000 0 0 0 0 2335600 4757500 2190100 3346500 2979200 7073200 5377200 5520100 5065000 3948800 10455000 59689 2226 53682 503657;503658;503659;503660;503661;503662;503663;503664;503665;503666;503667 399477;399478;399479;399480;399481;399482 399477 6 YAEAVTR Unmodified 808.40792 0.40791731 733 P00558 PGK1 Phosphoglycerate kinase 1 yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 6.9 3.81 3 1 6 1 2 1 1 1 1 1 1 1 14.886 13.738 2 0.015208 15737 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 119.57 68.6 5112700000 2064200 4013900000 100370000 0 0 0 0 0 0 2152800 181250000 138550000 20151000 162300000 491920000 59690 733 53683 503668;503669;503670;503671;503672;503673;503674;503675;503676;503677 399483;399484;399485;399486;399487 399485 2 YAEAVTRAK Unmodified 1007.54 0.53999412 733 P00558 PGK1 Phosphoglycerate kinase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 1.83 0.687 2 3 1 3 2 1 46.046 45.601 2 0.0031083 14375 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 142.04 48.615 12182000000 6596300000 3543600000 2041600000 0 0 0 0 0 0 0 0 0 0 0 0 59691 733 53684 503678;503679;503680;503681;503682;503683 399488;399489;399490;399491;399492;399493;399494;399495;399496;399497;399498;399499;399500;399501 399497 12 YAEENFK Unmodified 899.4025 0.40249759 330 O43435 TBX1 T-box transcription factor TBX1 yes yes 0 0 0 By MS/MS 10 0 1 1 21.458 22.11 2 0.02347 21989 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 92.191 70.488 3276400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3276400 59692 330 53685 503684 399502 399502 1 YAEERDRAEAEAR Unmodified 1564.723 0.72299688 1356;1357 P35579;P35580 MYH9;MYH10 Myosin-9;Myosin-10 no no 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 36 3 3 4 3 3 3 3 2 3 3 3 3 11.097 11.22 2;3;4 6.9495E-12 10344 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 135.58 111.74 5519800000 0 0 0 687720000 240750000 491650000 294600000 307020000 294610000 429460000 408810000 835460000 614320000 332270000 583100000 59693 1356;1357 53686 503685;503686;503687;503688;503689;503690;503691;503692;503693;503694;503695;503696;503697;503698;503699;503700;503701;503702;503703;503704;503705;503706;503707;503708;503709;503710;503711;503712;503713;503714;503715;503716;503717;503718;503719;503720 399503;399504;399505;399506;399507;399508;399509;399510;399511;399512;399513;399514;399515;399516;399517;399518;399519;399520;399521;399522;399523;399524;399525 399523 13 YAEIVHLTLPDGTK Unmodified 1555.8246 0.8246084 1121 P21281 ATP6V1B2 V-type proton ATPase subunit B, brain isoform yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.432 76.49 3 0.00081149 87441 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 59.709 54.994 111410000 0 0 0 4412900 2563700 11322000 5684800 9596500 6357200 13277000 9621600 13600000 4685200 6829100 23458000 59694 1121 53687 503721;503722;503723;503724;503725;503726;503727;503728;503729;503730;503731;503732 399526;399527;399528;399529;399530;399531;399532;399533;399534;399535;399536;399537 399533 12 YAELLAIIEELGK Unmodified 1460.8126 0.81264673 184 O14519 CDK2AP1 Cyclin-dependent kinase 2-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 102.67 97.209 2 0.0079509 117965 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 76.143 63.929 14957000 4764300 10193000 0 0 0 0 0 0 0 0 0 0 0 0 0 59695 184 53688 503733;503734;503735 399538;399539;399540 399539 3 YAELLEEHRNSQK Unmodified 1615.7954 0.79543354 1409 P40222 TXLNA Alpha-taxilin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31.256 30.391 3 2.1476E-08 30969 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 104.17 97.917 140600000 48820000 6744700 4390000 6168300 0 3322000 2612800 3566900 3469800 6160700 7831800 14552000 3575900 7617800 21771000 59696 1409 53689 503736;503737;503738;503739;503740;503741;503742;503743;503744;503745;503746;503747;503748;503749 399541;399542;399543;399544;399545;399546;399547;399548;399549;399550;399551;399552;399553 399545 12 YAENVPHNMTEK Unmodified 1431.6453 0.64526383 1324 P32780 GTF2H1 General transcription factor IIH subunit 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 33.212 28.65 3 0.031975 37593 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 25.908 18.364 24304000 0 24304000 0 0 0 0 0 0 0 0 0 0 0 0 0 59697 1324 53690 503750;503751 399554 399554 1 YAEQLPVAQIIHQK Unmodified 1636.8937 0.89369102 3647 Q92643 PIGK GPI-anchor transamidase yes yes 0 0 0 By MS/MS 2 0 1 1 81.465 73.335 3 0.016582 96123 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 22.318 10.705 7138900 7138900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59698 3647 53691 503752 399555 399555 1 YAEQQNEEEK Unmodified 1266.5364 0.53642488 3095 Q7Z478 DHX29 ATP-dependent RNA helicase DHX29 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 7.0573 7.1178 2 0.027961 5535 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 43.808 40.801 12841000 0 0 0 992240 1340300 2424600 1343600 0 0 0 0 1387700 2292900 0 3060200 59699 3095 53692 503753;503754;503755;503756;503757;503758;503759 399556;399557 399557 2 YAESLGQYAAASQSCNFALR Unmodified 2206.0113 0.011316328 2465 Q14CX7 NAA25 N-alpha-acetyltransferase 25, NatB auxiliary subunit yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 77.672 77.853 3 0.021164 89632 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 30.534 26.93 13220000 0 0 0 0 0 0 0 6572200 6648100 0 0 0 0 0 0 59700 2465 53693 503760;503761 399558 399558 0 YAESLSEAMEK Oxidation (M) 1272.5544 0.55438313 2867 Q6BDS2 UHRF1BP1 UHRF1-binding protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 30.483 30.675 2 0.00020428 32930 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 102.06 84.242 79118000 0 0 0 4322900 6345200 6771400 7129000 7179500 5920400 0 7390300 12727000 8962700 5919100 6450400 59701 2867 53694 503762;503763;503764;503765;503766;503767;503768;503769;503770;503771;503772 399559;399560;399561;399562;399563;399564;399565;399566;399567;399568;399569;399570 399568 4516 12 YAESLSEAMEK Unmodified 1256.5595 0.55946851 2867 Q6BDS2 UHRF1BP1 UHRF1-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 48.43 48.134 2 1.9273E-05 53319 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 125.48 109.15 184880000 0 34858000 0 5359200 8561200 10374000 8986800 11686000 9494000 14094000 17723000 19059000 16488000 13012000 15184000 59702 2867 53694 503773;503774;503775;503776;503777;503778;503779;503780;503781;503782;503783;503784;503785 399571;399572;399573;399574;399575;399576;399577;399578;399579;399580;399581;399582;399583;399584 399579 13 YAETFLEPWFK Unmodified 1429.6918 0.69180331 4726 Q9NXG2 THUMPD1 THUMP domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 95.903 90.754 2 3.0088E-05 114063 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.57 116.26 54460000 16343000 35842000 2275300 0 0 0 0 0 0 0 0 0 0 0 0 59703 4726 53695 503786;503787;503788 399585;399586;399587;399588 399586 4 YAEVLRYVDSSK Unmodified 1428.7249 0.72489436 2162 Q08752 PPID Peptidyl-prolyl cis-trans isomerase D yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 67.642 61.077 2;3 4.0925E-13 81647 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 151.1 89.446 347050000 313250000 29247000 4554100 0 0 0 0 0 0 0 0 0 0 0 0 59704 2162 53696 503789;503790;503791;503792 399589;399590;399591;399592 399591 3 YAEYSFTSLPVPESNLR Unmodified 1971.9578 0.95780742 2804 Q5UIP0 RIF1 Telomere-associated protein RIF1 yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 85.098 85.233 2 9.4886E-07 98550 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 104.24 95.939 61904000 0 0 0 0 0 3553000 0 5727800 3850100 10271000 6383300 10930000 3239300 4112400 13837000 59705 2804 53697 503793;503794;503795;503796;503797;503798;503799;503800;503801 399593;399594;399595 399594 3 YAFELVDK Unmodified 983.4964 0.49639797 5074 Q9UQR1 ZNF148 Zinc finger protein 148 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 66.877 66.529 2 0.0075386 76500 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 89.296 55.78 380110000 0 73991000 0 21802000 19942000 25601000 28269000 16255000 22381000 30413000 22356000 29638000 27787000 21246000 40428000 59706 5074 53698 503802;503803;503804;503805;503806;503807;503808;503809;503810;503811;503812;503813;503814 399596;399597;399598;399599;399600;399601;399602;399603;399604;399605;399606;399607;399608;399609;399610 399607 15 YAFGSNVTPQPYLK Unmodified 1583.7984 0.79839365 3760 Q96BN2 TADA1 Transcriptional adapter 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 74.716 74.064 2 0.0019281 93778 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 87.184 58.98 119690000 16023000 0 0 7557200 0 8744900 0 8449700 8945800 11443000 12143000 12042000 9006600 9099000 16241000 59707 3760 53699 503815;503816;503817;503818;503819;503820;503821;503822;503823;503824;503825 399611;399612;399613;399614;399615;399616;399617 399613 7 YAFSGVAFTGAK Unmodified 1217.6081 0.60807369 1170 P23919 DTYMK Thymidylate kinase yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 72.646 72.749 2 0.013987 84084 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 47.971 34.392 7909000 0 0 0 0 0 0 0 0 0 2606400 0 0 5302600 0 0 59708 1170 53700 503826;503827 399618;399619 399619 2 YAFVNWINK Unmodified 1153.592 0.59202969 986;985 P13797;P13796 PLS3;LCP1 Plastin-3;Plastin-2 no no 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 81.031 80.436 2 0.0077155 93503 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 85.265 76.352 210610000 25098000 0 0 3798300 0 21036000 4324700 8403300 8345600 15915000 14994000 20451000 6545300 12594000 69104000 59709 986;985 53701 503828;503829;503830;503831;503832;503833;503834;503835;503836;503837;503838;503839 399620;399621;399622 399622 3 YAGDIIK Unmodified 778.4225 0.42250475 3041 Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 33.189 33.324 2 0.030787 36461 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 74.415 36.77 850550000 0 0 0 51883000 47311000 66636000 69353000 51505000 56343000 96413000 117550000 0 92727000 80396000 120430000 59710 3041 53702 503840;503841;503842;503843;503844;503845;503846;503847;503848;503849;503850 399623;399624 399624 2 YAGEEGMIEDMK Unmodified 1371.5687 0.56865299 3143 Q86U86 PBRM1 Protein polybromo-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 56.681 55.464 2 0.00083099 62274 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.887 68.946 32285000 0 20486000 0 0 0 0 0 0 0 2684900 0 0 0 2655200 6459000 59711 3143 53703 503851;503852;503853;503854 399625;399626;399627;399628;399629 399627 5 YAGGNPVCVRPTPK Unmodified 1514.7664 0.76638202 2468 Q15004 KIAA0101 PCNA-associated factor yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 35.339 34.954 3 4.5854E-08 37243 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.728 78.972 252390000 37623000 0 0 14068000 10881000 15780000 0 10229000 17011000 19322000 28031000 32814000 17926000 15964000 32737000 59712 2468 53704 503855;503856;503857;503858;503859;503860;503861;503862;503863;503864;503865;503866 399630;399631;399632;399633;399634;399635;399636;399637;399638;399639;399640;399641 399633 12 YAGGVAEYR Unmodified 984.46649 0.46649483 4828 Q9P2T1 GMPR2 GMP reductase 2 yes yes 0 0 0 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 27.527 28.071 2 0.012192 29202 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.679 42.042 24835000 0 0 0 0 0 0 0 0 0 0 5494700 4663900 0 4104600 10572000 59713 4828 53705 503867;503868;503869;503870 399642 399642 1 YAGGVAEYRASEGK Unmodified 1456.6947 0.69465686 4828 Q9P2T1 GMPR2 GMP reductase 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 2 3 2 30.86 26.389 2;3 2.0101E-18 36697 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 108.23 99.936 518650000 402450000 65119000 51083000 0 0 0 0 0 0 0 0 0 0 0 0 59714 4828 53706 503871;503872;503873;503874;503875;503876;503877 399643;399644;399645;399646;399647;399648;399649;399650 399646 8 YAGHVGSVNSIK Unmodified 1230.6357 0.63568542 5105 Q9Y2I8 WDR37 WD repeat-containing protein 37 yes yes 0 0 0 By MS/MS By MS/MS 2 0 4 2 2 32.274 27.56 2;3 0.0051613 39095 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.379 30.181 133390000 118950000 0 14437000 0 0 0 0 0 0 0 0 0 0 0 0 59715 5105 53707 503878;503879;503880;503881 399651;399652 399651 2 YAGKDGYNYTLSK Unmodified 1478.7042 0.70415892 1314 P31949 S100A11 Protein S100-A11;Protein S100-A11, N-terminally processed yes yes 0 0 1 By MS/MS 2 0 1 1 42.53 35.794 3 0.027992 49253 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 39.016 26.747 9053100 9053100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59716 1314 53708 503882 399653 399653 1 YAGLLEK Unmodified 792.43815 0.43815481 1471 P43034 PAFAH1B1 Platelet-activating factor acetylhydrolase IB subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 5 1 2 2 38.391 33.709 2 0.029674 48953 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.407 16.659 863340000 5102400 790940000 67290000 0 0 0 0 0 0 0 0 0 0 0 0 59717 1471 53709 503883;503884;503885;503886;503887 399654;399655;399656 399655 3 YAGLQPYLDQINVIEEQVAALEQAAYK Unmodified 3036.5444 0.54441738 2965 Q6QNY1 BLOC1S2 Biogenesis of lysosome-related organelles complex 1 subunit 2 yes yes 0 0 0 By MS/MS 3 0 1 1 102.57 99.014 3 2.7845E-07 119009 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 56.625 54.281 1612400 0 1612400 0 0 0 0 0 0 0 0 0 0 0 0 0 59718 2965 53710 503888 399657 399657 1 YAGLSTCFR Unmodified 1073.4964 0.49641475 1580 P49591 SARS Serine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 52.271 52.95 2 0.0076455 59060 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.877 46.955 38464000 0 0 0 0 0 0 0 0 0 0 0 13185000 0 0 25278000 59719 1580 53711 503889;503890;503891 399658;399659;399660 399658 3 YAGQEVVFK Unmodified 1039.5338 0.53384611 4350 Q9H1H9 KIF13A Kinesin-like protein KIF13A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 6.25 3.77 1 1 2 2 1 1 48.671 46.108 2 0.0074649 59310 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.492 9.6978 143020000 0 124770000 0 0 0 7693300 0 0 0 0 0 0 10561000 0 0 59720 4350 53712 503892;503893;503894;503895 399661;399662;399663 399661 3 YAGSALQYEDVSTAVQNLQK Unmodified 2184.0699 0.069877064 4540 Q9NP79 VTA1 Vacuolar protein sorting-associated protein VTA1 homolog yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.3 3.22 4 1 18 3 2 1 2 1 2 2 2 2 2 2 2 81.299 80.618 2;3 4.6003E-239 98914 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 323.68 316.39 987310000 0 856330000 6570100 0 2619800 11733000 2110800 8436300 0 20895000 15514000 16502000 4186600 9480300 32932000 59721 4540 53713 503896;503897;503898;503899;503900;503901;503902;503903;503904;503905;503906;503907;503908;503909;503910;503911;503912;503913;503914;503915;503916;503917;503918 399664;399665;399666;399667;399668;399669;399670;399671;399672;399673;399674;399675;399676 399667 11 YAHQSGFHVDRR Unmodified 1471.7069 0.7068933 1441 P41252 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS 10 0 1 1 16.128 16.642 3 0.010015 15661 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.847 6.5157 6463600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6463600 59722 1441 53714 503919 399677 399677 1 YAHWVVSQPPDTYLK Unmodified 1802.8992 0.89917033 3692 Q92973 TNPO1 Transportin-1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 74.039 74.108 3 0.0079444 85181 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 21.041 15.985 98590000 0 0 0 2289900 0 24086000 2177300 10987000 7133900 7954200 0 0 6119700 7627700 30214000 59723 3692 53715 503920;503921;503922;503923;503924;503925;503926;503927;503928 399678;399679;399680;399681;399682;399683 399678 6 YAILNEPFK Unmodified 1093.5808 0.5807963 2451 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.486 72.556 2 0.0031874 83499 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 133.12 133.12 474470000 0 0 0 22309000 21464000 44984000 33283000 40649000 28920000 44992000 53739000 51597000 35138000 36608000 60791000 59724 2451 53716 503929;503930;503931;503932;503933;503934;503935;503936;503937;503938;503939;503940 399684;399685;399686;399687;399688;399689;399690;399691;399692;399693;399694;399695;399696;399697;399698 399696 15 YAILNRDPNNPK Unmodified 1413.7365 0.7364621 317 O43314 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 35.794 36.103 3 0.0078237 38601 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.077 28.135 45397000 0 0 0 0 0 4958900 4470100 3441900 3353200 6474600 4344800 5824800 6461500 0 6067500 59725 317 53717 503941;503942;503943;503944;503945;503946;503947;503948;503949 399699;399700;399701;399702;399703;399704 399700 6 YAINPHLTEDQRFPQLR Unmodified 2097.0756 0.075571565 5010 Q9ULX3 NOB1 RNA-binding protein NOB1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 72.082 72.264 4 0.00014024 82560 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.529 61.345 25824000 0 0 0 0 0 6525900 0 0 3812700 0 0 0 0 0 15485000 59726 5010 53718 503950;503951;503952 399705;399706 399706 2 YAIPTIDAEAYAIGK Unmodified 1594.8243 0.82427405 3111 Q7Z6E9 RBBP6 E3 ubiquitin-protein ligase RBBP6 yes yes 0 0 0 By MS/MS 10 0 1 1 83.888 83.989 2 0.028768 97281 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 44.614 34.66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59727 3111 53719 503953 399707 399707 1 YALFTYESLK Unmodified 1233.6281 0.62814043 4530 Q9HD67 MYO10 Unconventional myosin-X yes yes 0 0 0 By MS/MS 2 0 1 1 85.466 77.336 2 0.013139 100946 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.358 73.676 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59728 4530 53720 503954 399708 399708 1 YALGERQSYK Unmodified 1213.6091 0.60913632 896 P09960 LTA4H Leukotriene A-4 hydrolase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 30.624 25.815 2;3 0.00059698 36367 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 121.5 85.107 316170000 286900000 18906000 10364000 0 0 0 0 0 0 0 0 0 0 0 0 59729 896 53721 503955;503956;503957;503958 399709;399710;399711;399712;399713;399714 399710 6 YALIQHQK Unmodified 999.55016 0.55016488 1587 P49711 CTCF Transcriptional repressor CTCF no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.037 22.262 2 0.0052037 23084 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 107.74 72.92 47072000 0 0 0 3129900 2689300 0 2461400 2610800 2884100 5491100 5486800 4777400 6042200 6069900 5429100 59730 1587 53722 503959;503960;503961;503962;503963;503964;503965;503966;503967;503968;503969;503970 399715;399716;399717;399718;399719;399720;399721;399722;399723;399724;399725 399719 11 YALPLVGHR Unmodified 1024.5818 0.58179936 982 P13667 PDIA4 Protein disulfide-isomerase A4 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 59.338 59.648 2 0.0094557 66938 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.682 51.05 16529000 0 0 0 0 0 0 1748500 0 0 1847300 3171700 0 0 0 9761700 59731 982 53723 503971;503972;503973;503974 399726;399727 399726 2 YALPLVGHRK Unmodified 1152.6768 0.67676237 982 P13667 PDIA4 Protein disulfide-isomerase A4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 46.121 46.35 3 0.0025924 52062 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 60.892 45.277 148960000 0 0 0 4451400 0 9796300 5564200 7301600 10809000 6052900 13444000 15838000 16507000 8395500 50801000 59732 982 53724 503975;503976;503977;503978;503979;503980;503981;503982;503983;503984;503985 399728;399729;399730;399731;399732;399733;399734;399735;399736;399737;399738 399732 10 YALQSAAGK Unmodified 907.47633 0.47633123 4633 Q9NTI5 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 24.38 23.699 2 0.011616 25585 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 62.546 29.189 123920000 10102000 89979000 0 0 1475600 2444100 1468900 0 0 2774100 3010400 3642800 2338500 2243400 4445300 59733 4633 53725 503986;503987;503988;503989;503990;503991;503992;503993;503994;503995;503996 399739;399740;399741;399742 399739 4 YALSVGYR Unmodified 927.48142 0.48141661 999 P14550 AKR1A1 Alcohol dehydrogenase [NADP(+)] yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 54.934 51.125 2 0.0025411 69232 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 121.29 65.851 60606000 28046000 0 2400000 0 0 0 0 0 0 0 0 0 0 0 30160000 59734 999 53726 503997;503998;503999 399743;399744 399744 2 YALTGDEVK Unmodified 994.49713 0.49712625 1905 P62701;Q8TD47;P22090 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.12 3.89 3 1 4 1 2 1 1 1 1 1 39.876 35.961 2 0.0063105 46587 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.14 69.256 1800700000 57635000 1582200000 17067000 0 0 0 0 0 0 0 143720000 0 0 0 0 59735 1905 53727 504000;504001;504002;504003;504004;504005;504006;504007 399745;399746;399747;399748;399749;399750;399751;399752 399746 7 YALTGDEVKK Unmodified 1122.5921 0.59208927 1905 P62701;Q8TD47;P22090 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 28.206 27.643 2 0.017987 28512 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 85.676 48.117 201100000 0 58918000 0 6539600 10830000 0 13941000 11349000 0 15205000 15616000 25664000 11550000 15645000 15846000 59736 1905 53728 504008;504009;504010;504011;504012;504013;504014;504015;504016;504017;504018;504019 399753;399754;399755;399756;399757;399758 399757 6 YALVWGTSTK Unmodified 1124.5866 0.58660996 1753 P55039 DRG2 Developmentally-regulated GTP-binding protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.93 2.72 2 13 1 1 1 1 2 1 2 1 1 1 1 1 1 68.005 67.149 2 0.0021904 76787 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 85.731 53.589 134190000 40816000 0 3450300 4506700 1295300 1951200 3096900 3549800 1563900 3186200 11275000 0 2588800 9015700 47891000 59737 1753 53729 504020;504021;504022;504023;504024;504025;504026;504027;504028;504029;504030;504031;504032;504033;504034 399759;399760;399761;399762;399763;399764 399760 6 YALYDASFETK Unmodified 1306.6081 0.60813326 1822 P60981 DSTN Destrin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68.346 67.154 2 2.0005E-05 78062 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 130.66 110.67 548750000 6436200 136490000 4115300 16326000 11216000 29037000 21253000 19960000 18263000 26517000 61483000 0 23291000 43954000 130410000 59738 1822 53730 504035;504036;504037;504038;504039;504040;504041;504042;504043;504044;504045;504046;504047;504048 399765;399766;399767;399768;399769;399770;399771;399772;399773;399774;399775;399776;399777;399778;399779;399780;399781 399780 17 YALYDATYETK Unmodified 1336.6187 0.61869795 1165;5088 P23528;Q9Y281 CFL1;CFL2 Cofilin-1;Cofilin-2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 57.119 55.791 2 5.3063E-09 70970 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.4 113.19 5075600000 17813000 1607900000 17635000 111680000 73767000 90428000 113210000 102580000 87917000 150170000 619270000 433600000 127620000 341230000 1180700000 59739 1165;5088 53731 504049;504050;504051;504052;504053;504054;504055;504056;504057;504058;504059;504060;504061;504062;504063;504064;504065 399782;399783;399784;399785;399786;399787;399788;399789;399790;399791;399792;399793;399794;399795;399796;399797;399798;399799;399800;399801;399802;399803;399804 399787 23 YAMEQSIK Oxidation (M) 984.45863 0.45863226 4912 Q9UHX1 PUF60 Poly(U)-binding-splicing factor PUF60 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 5 20 2 2 1 2 2 2 2 2 1 2 1 2 1 1 2 15.639 14.996 2 0.0032486 18501 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.84 65.13 848770000 22404000 282770000 5247300 34965000 32652000 36804000 70792000 42717000 18713000 25990000 41140000 73828000 45263000 41706000 73780000 59740 4912 53732 504066;504067;504068;504069;504070;504071;504072;504073;504074;504075;504076;504077;504078;504079;504080;504081;504082;504083;504084;504085;504086;504087;504088;504089;504090 399805;399806;399807;399808;399809;399810;399811;399812;399813;399814;399815;399816;399817;399818;399819;399820;399821;399822;399823;399824 399812 6272 16 YAMEQSIK Unmodified 968.46372 0.46371763 4912 Q9UHX1 PUF60 Poly(U)-binding-splicing factor PUF60 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32.4 31.58 2 0.0052431 33568 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.59 72.889 2459400000 26637000 1034600000 11957000 3054100 74996000 88739000 90459000 80385000 75592000 144220000 137960000 215250000 123220000 151320000 200980000 59741 4912 53732 504091;504092;504093;504094;504095;504096;504097;504098;504099;504100;504101;504102;504103;504104;504105 399825;399826;399827;399828;399829;399830;399831;399832 399827 6 YAMLQDK Unmodified 867.41604 0.41603916 4872 Q9UER7 DAXX Death domain-associated protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 30.599 30.409 2 0.023725 33758 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 84.244 62.697 191560000 0 54799000 0 11166000 7685100 9604500 7670200 8816500 6753200 13450000 11649000 14048000 12042000 12600000 21274000 59742 4872 53733 504106;504107;504108;504109;504110;504111;504112;504113;504114;504115;504116;504117;504118 399833;399834;399835;399836;399837;399838;399839;399840;399841 399841 9 YAMLQDK Oxidation (M) 883.41095 0.41095378 4872 Q9UER7 DAXX Death domain-associated protein 6 yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 16.078 16.192 2 0.048819 15905 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 49.65 29.728 30740000 0 0 0 2644100 2447300 2388600 3655200 1547900 2829200 3450900 3695100 0 4365200 3716900 0 59743 4872 53733 504119;504120;504121;504122;504123;504124;504125;504126;504127;504128 399842 399842 1 YAMMFAELK Oxidation (M) 1118.514 0.51403865 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 2 3 2 75.602 70.51 2 0.0069627 90799 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 91.318 81.802 183800000 76020000 83749000 24036000 0 0 0 0 0 0 0 0 0 0 0 0 59744 3119 53734 504129;504130;504131;504132;504133;504134;504135 399843;399844;399845;399846;399847;399848 399845 4742;4743 6 YAMMFAELK 2 Oxidation (M) 1134.509 0.50895327 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 57.052 51.354 2 0.031833 63686 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 62.546 57.812 81421000 21224000 46358000 13839000 0 0 0 0 0 0 0 0 0 0 0 0 59745 3119 53734 504136;504137;504138;504139 399849;399850;399851 399850 4742;4743 1 YAMMFAELK Unmodified 1102.5191 0.51912402 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS 2 0 1 1 86.063 77.932 2 0.034058 101722 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.302 89.946 51697000 51697000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59746 3119 53734 504140 399852 399852 0 YAMPSSTPLYHNAIK Oxidation (M) 1707.829 0.82904185 3155 Q86UU0 BCL9L B-cell CLL/lymphoma 9-like protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 48.894 49.038 3 2.2369E-07 55089 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 85.457 77.073 177920000 0 0 0 10428000 12561000 15335000 16630000 10386000 14743000 13884000 22174000 24669000 0 14572000 22539000 59747 3155 53735 504141;504142;504143;504144;504145;504146;504147;504148;504149;504150;504151 399853;399854;399855;399856;399857;399858;399859 399857 4776 7 YAMPSSTPLYHNAIK Unmodified 1691.8341 0.83412723 3155 Q86UU0 BCL9L B-cell CLL/lymphoma 9-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63.582 62.808 3 0.0030391 84961 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 42.682 35.524 230380000 40202000 0 4628300 7070400 7137200 11794000 9419500 14284000 7768500 17123000 18953000 16408000 14450000 18436000 42708000 59748 3155 53735 504152;504153;504154;504155;504156;504157;504158;504159;504160;504161;504162;504163;504164;504165 399860;399861;399862 399861 2 YANENPGDFVNYNK Unmodified 1643.7216 0.72159989 5056 Q9UPR0 PLCL2 Inactive phospholipase C-like protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 61.311 55.435 2 4.1324E-18 71238 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.36 104.64 22549000 0 22549000 0 0 0 0 0 0 0 0 0 0 0 0 0 59749 5056 53736 504166 399863 399863 1 YANEVNSDAGAFK Unmodified 1384.6259 0.62590859 4895 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 39.75 38.778 2 1.2756E-28 43427 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 182.28 182.28 1382600000 9240700 395070000 0 46865000 49329000 65272000 60833000 71979000 65712000 94650000 96713000 102860000 131110000 71004000 121970000 59750 4895 53737 504167;504168;504169;504170;504171;504172;504173;504174;504175;504176;504177;504178;504179;504180;504181 399864;399865;399866;399867;399868;399869;399870;399871;399872;399873;399874;399875;399876 399864 7 YAPAEGNRYDGIYK Unmodified 1615.7631 0.76307078 4002 Q96T88 UHRF1 E3 ubiquitin-protein ligase UHRF1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41.464 41.002 3 0.001309 45835 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 53.448 39.002 190080000 0 16865000 55953000 5479400 6522000 7129800 9389700 10153000 7081900 7896100 12105000 13174000 10884000 8625000 18818000 59751 4002 53738 504182;504183;504184;504185;504186;504187;504188;504189;504190;504191;504192;504193;504194;504195 399877;399878;399879;399880;399881;399882;399883;399884;399885;399886;399887;399888;399889;399890 399887 13 YAPENLDEQIK Unmodified 1318.6405 0.64049603 4445 Q9H845 ACAD9 Acyl-CoA dehydrogenase family member 9, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 54.958 49.152 2 0.03085 63448 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 52.79 34.926 17518000 0 17518000 0 0 0 0 0 0 0 0 0 0 0 0 0 59752 4445 53739 504196 399891 399891 1 YAPGDAVEK Unmodified 948.45526 0.45526144 4319 Q9H0A0 NAT10 N-acetyltransferase 10 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 20.975 21.039 2 0.034602 21520 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 46.447 7.6405 15735000 0 0 0 0 0 0 5974600 0 9760900 0 0 0 0 0 0 59753 4319 53740 504197;504198 399892 399892 1 YAPSEAGLHEMDIR Unmodified 1587.7351 0.73514147 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 1 1 2 56.606 56.767 2;3 0.00024717 64335 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 72.891 55.226 399140000 0 0 0 17022000 11180000 24303000 12573000 19663000 11032000 22616000 62868000 43252000 14604000 28329000 131700000 59754 1124 53741 504199;504200;504201;504202;504203;504204;504205;504206;504207;504208;504209;504210;504211 399893;399894;399895;399896;399897;399898;399899 399894 6 YAPSEAGLHEMDIR Oxidation (M) 1603.7301 0.73005609 1124 P21333 FLNA Filamin-A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 40.913 41.371 3 0.0013679 46015 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 44.807 35.918 145110000 0 0 0 0 0 0 0 0 0 36276000 51201000 57629000 0 0 0 59755 1124 53741 504212;504213;504214 399900;399901 399900 1617 2 YAPSGFYIASGDVSGK Unmodified 1617.7675 0.76748745 453 O75083 WDR1 WD repeat-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.93 3.81 1 6 2 5 2 5 2 1 1 1 1 1 75.894 73.736 2;3 0.00010662 80904 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 83.617 77.836 3281200000 68452000 3099600000 28061000 2473600 0 0 0 0 0 0 13524000 12511000 0 7906200 48740000 59756 453 53742 504215;504216;504217;504218;504219;504220;504221;504222;504223;504224;504225;504226;504227;504228 399902;399903;399904;399905;399906;399907;399908;399909;399910;399911;399912;399913 399911 11 YAPTEAQLNAVDALIDSMSLAK Oxidation (M) 2336.157 0.15697751 974 P13010 XRCC5 X-ray repair cross-complementing protein 5 yes yes 0 1 0 By MS/MS By MS/MS 2.2 0.4 4 1 3 2 96.079 92.522 2;3 6.3822E-26 114245 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.25 103.22 380860000 0 370860000 9992100 0 0 0 0 0 0 0 0 0 0 0 0 59757 974 53743 504229;504230;504231;504232;504233 399914;399915;399916;399917 399914 1302 4 YAPTEAQLNAVDALIDSMSLAK Unmodified 2320.1621 0.16206289 974 P13010 XRCC5 X-ray repair cross-complementing protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.12 0.331 7 1 2 4 2 100.71 95.881 2;3 7.7557E-16 119897 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.376 89.318 590610000 90710000 482790000 17114000 0 0 0 0 0 0 0 0 0 0 0 0 59758 974 53743 504234;504235;504236;504237;504238;504239;504240;504241 399918;399919;399920;399921;399922;399923;399924;399925;399926 399924 9 YAPTEVGLHEMHIK Oxidation (M) 1639.8028 0.8028271 487 O75369 FLNB Filamin-B yes yes 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 41.421 40.215 3;4 0.00036447 57425 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.462 47.601 72372000 18961000 0 0 5077200 0 10994000 0 6598700 0 10345000 0 0 0 0 20397000 59759 487 53744 504242;504243;504244;504245;504246;504247 399927;399928 399928 628 1 YAPTEVGLHEMHIK Unmodified 1623.8079 0.80791248 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.33 3.77 2 4 2 1 1 1 1 60.396 57.926 3;4 0.0015089 80136 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.708 48.635 108250000 45518000 0 0 0 0 0 0 0 0 0 8299600 12100000 0 5669200 36660000 59760 487 53744 504248;504249;504250;504251;504252;504253 399929;399930;399931 399931 2 YAQAGFEGFK Unmodified 1116.524 0.52400971 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 54.582 53.267 2 0.0006507 60013 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 122.13 109.18 1672900000 26047000 732250000 20094000 45406000 47467000 95531000 48943000 60578000 44678000 72928000 88077000 111360000 87459000 76673000 115390000 59761 528 53745 504254;504255;504256;504257;504258;504259;504260;504261;504262;504263;504264;504265;504266;504267;504268;504269 399932;399933;399934;399935;399936;399937;399938;399939;399940;399941;399942;399943;399944;399945;399946;399947;399948 399944 11 YAQDFGLVEEACFPYTGTDSPCK Unmodified 2654.1305 0.13050477 1722 P53634 CTSC Dipeptidyl peptidase 1;Dipeptidyl peptidase 1 exclusion domain chain;Dipeptidyl peptidase 1 heavy chain;Dipeptidyl peptidase 1 light chain yes yes 0 0 0 By MS/MS 2 0 1 1 90.058 85.162 2 2.0043E-18 105989 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.92 120.74 20673000 0 20673000 0 0 0 0 0 0 0 0 0 0 0 0 0 59762 1722 53746 504270 399949 399949 1 YAQGFLPEK Unmodified 1051.5338 0.53384611 3261 Q8IXK0 PHC2 Polyhomeotic-like protein 2 yes yes 0 0 0 By MS/MS 10 0 1 1 50.762 51.188 2 0.034354 57704 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 66.546 40.323 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59763 3261 53747 504271 399950 399950 1 YAQPATATAATAAAAAAAAYSDGYGR Unmodified 2431.1404 0.14041625 309 O43251 RBFOX2 RNA binding protein fox-1 homolog 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 84.067 84.21 3 0.022867 97567 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 18.146 15.264 34285000 0 0 0 0 0 0 0 4932100 0 9362800 0 6096300 0 2405300 11488000 59764 309 53748 504272;504273;504274;504275;504276 399951 399951 1 YAQTQLDK Unmodified 965.48181 0.48181054 2408 Q14457 BECN1 Beclin-1 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 16.097 16.33 2 0.032623 16645 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 54.205 9.232 11717000 0 0 0 0 0 1569000 0 0 0 2779500 0 2136200 2472300 2760400 0 59765 2408 53749 504277;504278;504279;504280;504281 399952 399952 1 YAQVKPDGTYVK Unmodified 1367.7085 0.70851601 2494 Q15067 ACOX1 Peroxisomal acyl-coenzyme A oxidase 1 yes yes 0 0 1 By MS/MS 2 0 1 1 37.457 32.542 3 0.031784 42558 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 37.998 24.598 16793000 0 16793000 0 0 0 0 0 0 0 0 0 0 0 0 0 59766 2494 53750 504282 399953 399953 1 YAQWEESLK Unmodified 1152.5451 0.54513908 4268 Q9BZJ0 CRNKL1 Crooked neck-like protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 59.148 53.305 2 0.0043186 68679 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.28 82.992 38889000 0 38889000 0 0 0 0 0 0 0 0 0 0 0 0 0 59767 4268 53751 504283 399954 399954 1 YASENVNK Unmodified 923.43486 0.43486035 1911;4338 P62820;Q9H0U4 RAB1A;RAB1B Ras-related protein Rab-1A;Ras-related protein Rab-1B no no 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 7.4511 7.5685 2 0.0044499 5593 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 110.63 29.252 114760000 0 0 0 5253800 6971100 9459100 9395000 10098000 9500500 8213200 25350000 8857800 10130000 0 11536000 59768 1911;4338 53752 504284;504285;504286;504287;504288;504289;504290;504291;504292;504293;504294 399955;399956;399957;399958;399959;399960 399960 4 YASETLQAQSEEAR Unmodified 1581.7271 0.7270792 5001 Q9ULR0 ISY1 Pre-mRNA-splicing factor ISY1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 32.607 32.881 2 3.1285E-05 35072 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.06 91.516 37836000 0 0 0 0 0 3951900 2419300 3149500 0 4751000 7137800 0 4493900 5015900 6917200 59769 5001 53753 504295;504296;504297;504298;504299;504300;504301;504302 399961;399962;399963;399964;399965;399966;399967 399963 7 YASETLQAQSEEARR Unmodified 1737.8282 0.82819023 5001 Q9ULR0 ISY1 Pre-mRNA-splicing factor ISY1 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 28.931 29.207 3 2.1576E-20 30534 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 112.15 86.507 120820000 0 0 0 8141600 0 0 11839000 8759800 0 0 0 22075000 26957000 0 43049000 59770 5001 53754 504303;504304;504305;504306;504307;504308;504309;504310;504311;504312 399968;399969;399970;399971;399972;399973;399974;399975;399976;399977;399978 399971 10 YASFQVENDQER Unmodified 1484.6532 0.65318598 1729 P53992 SEC24C Protein transport protein Sec24C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 41.809 42.18 2 2.4602E-05 46955 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 101.38 89.334 44044000 0 0 0 0 0 7132700 3383100 0 0 8270300 8147600 7025100 0 0 10085000 59771 1729 53755 504313;504314;504315;504316;504317;504318;504319;504320;504321 399979;399980;399981;399982;399983;399984;399985;399986;399987 399980 9 YASIINLSLIADVAAEDVEK Unmodified 2133.1205 0.12051565 5310 yes yes 0 0 0 By MS/MS 1 0 1 1 109.77 115.04 3 0.029341 96402 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 23.447 20.394 + 16744000 16744000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59772 5310 53756 504322 399988 399988 1 YATDLLSVALNR Unmodified 1334.7194 0.71941505 1787 P56937 HSD17B7 3-keto-steroid reductase yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 84.954 85.096 2 0.0055376 97752 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 64.297 52.704 6523600 0 0 0 0 0 0 3791700 0 0 0 0 0 0 2732000 0 59773 1787 53757 504323;504324 399989;399990 399990 2 YATEEALK Unmodified 923.46001 0.46001246 1881 P62256 UBE2H Ubiquitin-conjugating enzyme E2 H yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.6 3.67 3 7 1 1 1 1 1 1 1 1 1 1 25.465 24.292 2 0.015996 25401 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 67.981 34.43 390010000 16142000 292330000 3041500 12468000 12728000 0 14824000 0 12856000 0 2816900 4855900 17942000 0 0 59774 1881 53758 504325;504326;504327;504328;504329;504330;504331;504332;504333;504334 399991;399992;399993;399994 399993 4 YATGENTVFVDTK Unmodified 1443.6882 0.6881745 3995 Q96SU4 OSBPL9 Oxysterol-binding protein-related protein 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 51.753 51.118 2 1.2949E-17 64768 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 152.07 131.1 428200000 0 158190000 0 13004000 10627000 16386000 18086000 16759000 17861000 30429000 30129000 33871000 18679000 29041000 35130000 59775 3995 53759 504335;504336;504337;504338;504339;504340;504341;504342;504343;504344;504345;504346;504347;504348 399995;399996;399997;399998;399999;400000;400001;400002;400003;400004;400005;400006;400007;400008;400009 399999 14 YATLATVSR Unmodified 980.5291 0.52909508 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 38.602 38.731 2 0.0030604 42928 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 91.853 67.699 229130000 0 0 0 13786000 15850000 20503000 18234000 20060000 14108000 20954000 25455000 34263000 22998000 22922000 0 59776 2392 53760 504349;504350;504351;504352;504353;504354;504355;504356;504357;504358;504359 400010;400011;400012;400013;400014;400015;400016;400017;400018;400019;400020;400021 400017 11 YATLPNIMK Unmodified 1049.558 0.55795237 1394 P38117 ETFB Electron transfer flavoprotein subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 68.979 69.118 2 0.0067484 78571 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 74.255 60.676 44670000 0 0 0 0 2257000 3889600 3606300 3417000 0 3803500 5069300 10561000 2960300 0 9106100 59777 1394 53761 504360;504361;504362;504363;504364;504365;504366;504367;504368;504369 400022;400023;400024;400025;400026;400027 400024 6 YATLSLFNTYK Unmodified 1319.6762 0.67615325 5216 Q9Y520 PRRC2C Protein PRRC2C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 82.092 81.523 2 1.5365E-07 94506 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 147.2 126.87 161980000 12274000 0 0 3064000 6501400 12096000 8273200 11222000 12259000 15723000 13333000 16581000 8304100 13116000 29235000 59778 5216 53762 504370;504371;504372;504373;504374;504375;504376;504377;504378;504379;504380;504381;504382 400028;400029;400030;400031;400032;400033;400034;400035;400036;400037;400038;400039;400040;400041;400042 400036 15 YATMAFGVQDNLK Oxidation (M) 1472.697 0.69696505 211 O14772 FPGT Fucose-1-phosphate guanylyltransferase yes yes 0 1 0 By MS/MS 2 0 1 1 65.666 59.748 2 4.4916E-10 76364 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.02 104.82 17883000 0 17883000 0 0 0 0 0 0 0 0 0 0 0 0 0 59779 211 53763 504383 400043 400043 280 1 YATVSSPSK Unmodified 938.47091 0.4709115 2063 Q01804 OTUD4 OTU domain-containing protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 15.209 15.286 2 0.0094522 14450 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 66.692 45.832 37200000 0 0 0 3741600 2939600 3452500 5601000 3667900 3646000 5520700 8630400 0 0 0 0 59780 2063 53764 504384;504385;504386;504387;504388;504389;504390;504391 400044;400045;400046;400047;400048;400049 400046 6 YAVDDVPFSIPAASEIADLSNIINK Unmodified 2661.3538 0.35376306 4294 Q9GZL7 WDR12 Ribosome biogenesis protein WDR12 yes yes 0 0 0 By MS/MS 2 0 1 1 102.02 97.308 3 2.2528E-18 120250 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.025 76.382 25760000 0 25760000 0 0 0 0 0 0 0 0 0 0 0 0 0 59781 4294 53765 504392 400050 400050 1 YAVDDVQYVDEIASVLTSQK Unmodified 2242.1005 0.10050849 972 P12955 PEPD Xaa-Pro dipeptidase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 1 4 1 99.572 95.589 2;3 1.2897E-180 117742 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 226.93 211.4 228160000 0 226530000 1636700 0 0 0 0 0 0 0 0 0 0 0 0 59782 972 53766 504393;504394;504395;504396;504397;504398 400051;400052;400053;400054;400055;400056;400057;400058 400052 7 YAVIGTYDGR Unmodified 1113.5455 0.54547343 2734 Q5JSH3 WDR44 WD repeat-containing protein 44 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 48.533 49.262 2 0.01615 54552 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.42 41.349 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59783 2734 53767 504399;504400 400059;400060 400059 2 YAVLYQPLFDK Unmodified 1355.7125 0.71253876 1761 P55209 NAP1L1 Nucleosome assembly protein 1-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 4 2 12 3 2 1 1 1 1 1 1 1 1 1 1 1 1 1 84.16 82.968 2 1.5365E-07 95652 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 147.2 127.93 4603300000 1841700000 1010000000 126980000 36181000 46528000 80122000 49954000 73634000 67721000 105340000 192620000 201750000 104430000 166760000 499580000 59784 1761 53768 504401;504402;504403;504404;504405;504406;504407;504408;504409;504410;504411;504412;504413;504414;504415;504416;504417;504418 400061;400062;400063;400064;400065;400066;400067;400068;400069;400070;400071;400072;400073;400074;400075;400076;400077;400078;400079 400067 18 YAVNVALQK Unmodified 1004.5655 0.56548059 4669 Q9NVI1 FANCI Fanconi anemia group I protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.765 49.921 2 0.0036518 55798 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 89.369 66.327 171400000 0 0 0 5593500 9576500 16906000 12408000 10501000 14329000 12151000 17829000 19502000 13781000 17831000 20992000 59785 4669 53769 504419;504420;504421;504422;504423;504424;504425;504426;504427;504428;504429;504430 400080;400081;400082;400083;400084;400085;400086;400087;400088;400089;400090;400091 400088 12 YAVPSAGLR Unmodified 932.50797 0.50796571 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 47.099 47.417 2 0.0044372 53443 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 86.833 46.565 201280000 0 0 0 0 0 19164000 10552000 16699000 5666300 24387000 26138000 28005000 16948000 0 53716000 59786 1986 53770 504431;504432;504433;504434;504435;504436;504437;504438;504439 400092;400093;400094;400095;400096;400097;400098;400099;400100;400101 400099 10 YAVQLINALIQDPAK Unmodified 1655.9247 0.9246568 3250 Q8IWZ3 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 91.492 91.609 2 0.045468 106391 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 54.471 41.894 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59787 3250 53771 504440 400102 400102 1 YAVSMAR Unmodified 796.39016 0.39015876 986 P13797 PLS3 Plastin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 29.456 29.635 2 0.023354 31563 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 86.512 57.984 211220000 0 0 0 7823700 7057800 15770000 11433000 8696200 6600700 16696000 23571000 20178000 0 17479000 75910000 59788 986 53772 504441;504442;504443;504444;504445;504446;504447;504448;504449;504450;504451 400103;400104;400105;400106;400107;400108;400109;400110;400111;400112;400113 400107 11 YAVSMAR Oxidation (M) 812.38507 0.38507338 986 P13797 PLS3 Plastin-3 yes yes 0 1 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 14.028 14.129 2 0.042348 13537 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 52.636 30.934 51368000 0 0 0 3318500 3864200 6756000 4690200 2183300 2550300 5605500 0 0 5188100 5681600 11531000 59789 986 53772 504452;504453;504454;504455;504456;504457;504458;504459;504460;504461 400114 400114 1 YAVTDDYQLSK Unmodified 1301.6139 0.61394692 2622 Q16644 MAPKAPK3 MAP kinase-activated protein kinase 3 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 54.128 48.78 2 0.001658 62985 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.882 71.267 88798000 0 88798000 0 0 0 0 0 0 0 0 0 0 0 0 0 59790 2622 53773 504462;504463 400115 400115 1 YAVTTGDHGIIR Unmodified 1301.6728 0.67279921 1721 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 42.431 42.608 2;3 1.3585E-05 47388 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 116.52 82.429 1070600000 0 0 0 38767000 49655000 71983000 61987000 85274000 50403000 87676000 131100000 116370000 109660000 95447000 172280000 59791 1721 53774 504464;504465;504466;504467;504468;504469;504470;504471;504472;504473;504474;504475;504476;504477;504478;504479;504480;504481;504482;504483;504484;504485;504486;504487 400116;400117;400118;400119;400120;400121;400122;400123;400124;400125;400126;400127;400128;400129;400130;400131;400132;400133;400134 400126 2 YAWVLDK Unmodified 893.4647 0.46470391 1960 P68104;Q5VTE0;Q05639 EEF1A1;EEF1A1P5;EEF1A2 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.667 63.76 2 0.041071 71906 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.312 20.197 261990000 0 0 0 10731000 9713600 24245000 16831000 20478000 19701000 22014000 25869000 29658000 21835000 18463000 42456000 59792 1960 53775 504488;504489;504490;504491;504492;504493;504494;504495;504496;504497;504498;504499 400135 400135 1 YAYTDWQSFTQPR Unmodified 1661.7474 0.74742071 2160 Q08554 DSC1 Desmocollin-1 yes yes 0 0 0 By MS/MS 10 0 1 1 78.574 78.763 2 0.0086485 90968 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 65.5 51.294 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59793 2160 53776 504500 400136 400136 1 YAYYDTER Unmodified 1079.456 0.45598972 141 O00303 EIF3F Eukaryotic translation initiation factor 3 subunit F yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 30.308 30.497 2 0.006389 31917 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 101.28 83.898 227720000 0 0 0 9620200 10407000 17117000 9272100 12287000 7307200 21362000 26092000 25340000 23617000 24946000 40353000 59794 141 53777 504501;504502;504503;504504;504505;504506;504507;504508;504509;504510;504511;504512 400137;400138;400139;400140;400141;400142;400143;400144;400145;400146;400147 400140 11 YAYYDTERIGVDLIMK Oxidation (M) 1964.9554 0.95536458 141 O00303 EIF3F Eukaryotic translation initiation factor 3 subunit F yes yes 0 1 1 By MS/MS 2 0 1 1 84.774 76.644 3 0.0019249 100099 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.288 46.821 36446000 36446000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59795 141 53778 504513 400148 400148 194 1 YAYYDTERIGVDLIMK Unmodified 1948.9604 0.96044996 141 O00303 EIF3F Eukaryotic translation initiation factor 3 subunit F yes yes 0 0 1 By MS/MS 2 0 1 1 90.295 82.165 3 0.00064967 106637 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.472 59.892 22864000 22864000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59796 141 53778 504514 400149 400149 1 YCADQQPENHEVDTSVSGAGCTTYK Unmodified 2816.1654 0.16538672 25 A6NDU8 C5orf51 UPF0600 protein C5orf51 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 45.99 41.291 3 1.6129E-92 54146 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.57 114.53 152790000 0 151390000 1395300 0 0 0 0 0 0 0 0 0 0 0 0 59797 25 53779 504515;504516;504517 400150;400151;400152 400151 3 YCASLGHK Unmodified 934.43309 0.43308621 3530 Q8WTS6 SETD7 Histone-lysine N-methyltransferase SETD7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 15.526 12.241 2 0.0028276 15723 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 119.89 98.733 146100000 84083000 31032000 30983000 0 0 0 0 0 0 0 0 0 0 0 0 59798 3530 53780 504518;504519;504520 400153;400154;400155 400155 3 YCAYNIGDQSAINELMQMR 2 Oxidation (M) 2307.9922 0.99223714 4895 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 yes yes 0 2 0 By matching By MS/MS By matching By matching By matching By matching 10 0 6 1 1 1 1 1 1 77.227 77.386 2 3.3623E-06 89374 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 68.277 55.51 41533000 0 0 0 0 0 0 0 0 0 7538400 6221700 7092200 5081700 4252300 11347000 59799 4895 53781 504521;504522;504523;504524;504525;504526 400156 400156 6248;6249 1 YCDPDSYHRR Unmodified 1367.5677 0.56768221 1202 P26368 U2AF2 Splicing factor U2AF 65 kDa subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.56 12.713 3 0.011633 11000 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 79.148 71.77 193190000 0 0 0 8396700 9772500 13080000 10713000 12719000 10480000 16210000 12478000 28897000 27919000 18405000 24119000 59800 1202 53782 504527;504528;504529;504530;504531;504532;504533;504534;504535;504536;504537;504538 400157;400158;400159;400160;400161;400162;400163;400164 400162 3 YCDPVVLTYQAER Unmodified 1612.7555 0.75554256 19 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 70.707 70.837 2 0.0024987 81603 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 58.37 51.242 37017000 0 0 0 0 1853700 3758200 1562400 4047300 0 2683900 4831100 5087900 3405700 4957000 4830000 59801 19 53783 504539;504540;504541;504542;504543;504544;504545;504546;504547;504548 400165;400166;400167;400168;400169;400170 400165 6 YCFEAPTLATLDPPHTVHSAPK Unmodified 2451.1893 0.18928069 5263 Q9Y620 RAD54B DNA repair and recombination protein RAD54B yes yes 0 0 0 By MS/MS 2 0 1 1 84.936 76.806 4 0.0019805 100267 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 44.632 42.299 24936000 24936000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59802 5263 53784 504549 400171 400171 1 YCFGVEDTLK Unmodified 1230.5591 0.55907458 1902 P62495 ETF1 Eukaryotic peptide chain release factor subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 4 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68.636 67.62 2 0.001031 77046 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 118.33 103.67 1748400000 28707000 1271000000 29135000 10371000 13511000 41139000 20314000 19115000 22571000 45702000 51282000 50244000 30561000 37693000 77074000 59803 1902 53785 504550;504551;504552;504553;504554;504555;504556;504557;504558;504559;504560;504561;504562;504563;504564;504565 400172;400173;400174;400175;400176;400177;400178;400179;400180;400181;400182;400183;400184;400185;400186;400187;400188;400189 400176 18 YCFPNYVGRPK Unmodified 1399.6707 0.67069072 1837;1444 P61163;P42025 ACTR1A;ACTR1B Alpha-centractin;Beta-centractin no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 58.254 56.942 3 0.0065141 65280 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 50.284 42.673 118830000 7705300 0 0 10710000 0 26584000 0 0 0 0 0 0 15744000 18339000 39748000 59804 1837;1444 53786 504566;504567;504568;504569;504570;504571 400190;400191;400192;400193 400193 4 YCGHLYGLGSGSSYVQNGTGNAYEEEANK Unmodified 3124.3469 0.34685656 4929 Q9UIV1 CNOT7 CCR4-NOT transcription complex subunit 7 yes yes 0 0 0 By MS/MS 2 0 1 1 73.776 65.58 3 1.6945E-40 86790 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 104.38 95.803 20257000 20257000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59805 4929 53787 504572 400194;400195 400195 2 YCIFDLATGK Unmodified 1186.5692 0.56924534 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 81.999 82.077 2 0.044171 95098 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 38.75 30.519 24327000 0 0 0 1078200 0 1747300 747830 0 2743100 0 2586400 4776700 2465900 3498100 4683400 59806 619 53788 504573;504574;504575;504576;504577;504578;504579;504580;504581 400196 400196 1 YCLHGEAGK Unmodified 1033.4651 0.46511462 2647 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 0 0 0 By MS/MS By matching By MS/MS 2 0 3 1 1 1 16.72 13.355 2 0.041336 19196 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.118 36.35 22490000 13382000 3305200 5802600 0 0 0 0 0 0 0 0 0 0 0 0 59807 2647 53789 504582;504583;504584 400197 400197 1 YCNSLPDIPFDPK Unmodified 1564.7232 0.7231798 3366 Q8N7H5 PAF1 RNA polymerase II-associated factor 1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.86 3.4 1 1 5 2 1 1 1 1 1 82.975 81.923 2 0.00070274 94541 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 72.434 65.745 270470000 0 219840000 0 0 0 5187000 0 0 5913100 9442100 10695000 19385000 0 0 0 59808 3366 53790 504585;504586;504587;504588;504589;504590;504591 400198;400199;400200;400201;400202 400201 4 YCPDNLEVYFEDEDRAELYRVPAK Unmodified 2990.3756 0.37563749 692 O95801 TTC4 Tetratricopeptide repeat protein 4 yes yes 0 0 2 By MS/MS 2 0 1 1 89.5 81.37 4 3.8175E-16 105690 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 91.128 88.543 62386000 62386000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59809 692 53791 504592 400203 400203 1 YCPQGTVADGAPSGTGDCPDPGEVPEYPPYYQEEAGY Unmodified 3992.6305 0.63054414 4008 Q99439 CNN2 Calponin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 83.064 83.167 3 0.021516 96163 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 15.189 13.681 50786000 0 0 0 0 7419300 3405600 3698500 5006300 4146000 7869400 7095800 0 0 0 12145000 59810 4008 53792 504593;504594;504595;504596;504597;504598;504599;504600 400204;400205 400204 2 YCRPESQEHPEADPGSAAPYLK Unmodified 2501.1281 0.128137 1419 P40763 STAT3 Signal transducer and activator of transcription 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.33 3.77 3 6 1 1 1 1 1 1 1 1 1 49.413 47.528 4 5.1184E-66 52240 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 97.488 93.994 144650000 14293000 20668000 51330000 3496500 0 8613900 0 0 0 11541000 0 0 5089400 8714400 20905000 59811 1419 53793 504601;504602;504603;504604;504605;504606;504607;504608;504609 400206;400207;400208;400209;400210;400211;400212;400213 400210 6 YCVEEEEK Unmodified 1084.4383 0.43829074 1977 P78347 GTF2I General transcription factor II-I yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19.784 19.339 2 0.0045978 19862 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 130.04 113.49 1545400000 21508000 163430000 0 86393000 78513000 119700000 93726000 65922000 70150000 130260000 133450000 143630000 155680000 125930000 157100000 59812 1977 53794 504610;504611;504612;504613;504614;504615;504616;504617;504618;504619;504620;504621;504622;504623 400214;400215;400216;400217;400218;400219;400220;400221;400222;400223;400224;400225;400226;400227 400221 12 YDAFGEDSSSAMGVENR Oxidation (M) 1849.7425 0.74247127 5125 Q9Y2X3 NOP58 Nucleolar protein 58 yes yes 0 1 0 By MS/MS By matching By matching By matching 10 0 4 1 1 1 1 45.918 46.032 2 0.0015857 52218 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 46.592 46.592 16313000 0 0 0 0 3412400 0 2665800 0 0 3689300 0 6545800 0 0 0 59813 5125 53795 504624;504625;504626;504627 400228 400228 6516 1 YDAFLASESLIK Unmodified 1355.6973 0.69728262 1927 P62906 RPL10A 60S ribosomal protein L10a yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 82.633 82.722 2 0.042265 96114 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 43.282 26.506 9052200 0 0 0 0 0 0 0 0 0 3169000 0 0 5883100 0 0 59814 1927 53796 504628;504629 400229 400229 1 YDAGEHGLQEAEK Unmodified 1445.6423 0.64228694 3702 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.32 3.22 5 1 22 1 3 2 1 2 2 2 1 2 2 2 2 2 2 2 25.232 24.528 2;3 1.9303E-30 31289 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 166.04 133.72 1257000000 4702600 698780000 12759000 29079000 31433000 50447000 39365000 24236000 32534000 36374000 40580000 52609000 45375000 46426000 112320000 59815 3702 53797 504630;504631;504632;504633;504634;504635;504636;504637;504638;504639;504640;504641;504642;504643;504644;504645;504646;504647;504648;504649;504650;504651;504652;504653;504654;504655;504656;504657 400230;400231;400232;400233;400234;400235;400236;400237;400238;400239;400240;400241;400242;400243;400244;400245;400246;400247;400248;400249;400250;400251 400235 19 YDAIARQGQSK Unmodified 1235.6258 0.62584901 2320 Q13573 SNW1 SNW domain-containing protein 1 yes yes 0 0 1 By MS/MS By matching By MS/MS 2 0 3 1 1 1 15.018 11.765 2 1.3227E-08 17180 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 143.5 111.97 57568000 36718000 9476300 11373000 0 0 0 0 0 0 0 0 0 0 0 0 59816 2320 53798 504658;504659;504660 400252;400253 400252 2 YDANPVVIEPSSVLNGGK Unmodified 1857.9472 0.94724273 3442 Q8NFA0 USP32 Ubiquitin carboxyl-terminal hydrolase 32 yes yes 0 0 0 By MS/MS 2 0 1 1 83.431 78.71 2 0.00047471 97907 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.093 79.993 29409000 0 29409000 0 0 0 0 0 0 0 0 0 0 0 0 0 59817 3442 53799 504661 400254 400254 1 YDCGEEILITVLSAMTEEAAVAIK Oxidation (M) 2641.2867 0.28667106 1949 P63241;Q6IS14 EIF5A;EIF5AL1 Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-1-like yes no 0 1 0 By MS/MS By MS/MS By MS/MS 2.09 0.287 10 1 7 3 1 102.76 96.495 2;3;4 2.9665E-57 120990 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 132.84 121.22 1134900000 839630000 271360000 23943000 0 0 0 0 0 0 0 0 0 0 0 0 59818 1949 53800 504662;504663;504664;504665;504666;504667;504668;504669;504670;504671;504672 400255;400256;400257;400258;400259;400260;400261;400262;400263 400260 3132 9 YDCGEEILITVLSAMTEEAAVAIK Unmodified 2625.2918 0.29175643 1949 P63241;Q6IS14 EIF5A;EIF5AL1 Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-1-like yes no 0 0 0 By MS/MS By MS/MS By MS/MS 1.71 0.765 10 7 4 11 8 2 107.06 104.3 2;3;4 3.9157E-159 108266 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 210.43 200.31 2809400000 1031200000 1640300000 137850000 0 0 0 0 0 0 0 0 0 0 0 0 59819 1949 53800 504673;504674;504675;504676;504677;504678;504679;504680;504681;504682;504683;504684;504685;504686;504687;504688;504689;504690;504691;504692;504693 400264;400265;400266;400267;400268;400269;400270;400271;400272;400273;400274;400275;400276;400277;400278;400279;400280;400281;400282;400283;400284;400285;400286;400287;400288;400289;400290;400291;400292 400269 28 YDDEDISEDIK Unmodified 1340.562 0.56197093 4917 Q9UI12 ATP6V1H V-type proton ATPase subunit H yes yes 0 0 0 By MS/MS 10 0 1 1 48.203 48.926 2 0.0061772 54218 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 73.885 44.798 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59820 4917 53801 504694 400293 400293 1 YDDMAAAMK Oxidation (M) 1030.41 0.4099675 1869;1311 P61981;P31946 YWHAG;YWHAB 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed;14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed no no 0 1 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 18.532 18.749 2 0.0078442 17825 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.107 19.243 21987000 0 0 0 1049300 863720 1034700 0 0 0 1447500 3399300 3988500 0 2143100 8060500 59821 1869;1311 53802 504695;504696;504697;504698;504699;504700;504701;504702 400294;400295 400294 1943;1944;3024;3025 2 YDDMAAAMK Unmodified 1014.4151 0.41505288 1869;1311 P61981;P31946 YWHAG;YWHAB 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed;14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 35.083 35.51 2 0.014237 38011 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 58.596 50.003 122860000 0 0 0 0 0 0 0 3701300 0 8222300 18864000 22869000 0 14666000 54533000 59822 1869;1311 53802 504703;504704;504705;504706;504707;504708 400296;400297;400298;400299 400298 3 YDDMAACMK Oxidation (M) 1119.4035 0.40350192 1940 P63104 YWHAZ 14-3-3 protein zeta/delta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 2 2 18.418 18.894 2 0.004077 18877 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.738 75.738 24968000 0 0 0 0 0 0 0 0 0 0 3357800 3448000 0 5428600 12734000 59823 1940 53803 504709;504710;504711;504712;504713;504714 400300;400301;400302;400303 400300 3117;3118 3 YDDMAACMK Unmodified 1103.4086 0.4085873 1940 P63104 YWHAZ 14-3-3 protein zeta/delta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 33.591 33.863 2 0.011907 36743 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 62.107 52.52 107420000 0 0 0 0 2398400 0 2395600 3702000 0 6482500 19919000 19701000 0 13116000 39710000 59824 1940 53803 504715;504716;504717;504718;504719;504720;504721;504722 400304;400305;400306;400307 400305 4 YDDMAACMK 2 Oxidation (M) 1135.3984 0.39841654 1940 P63104 YWHAZ 14-3-3 protein zeta/delta yes yes 0 2 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 8.5168 8.8054 2 0.016849 7478 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 41.652 41.652 6256600 0 0 0 0 0 0 0 0 0 0 2472100 2929000 0 855450 0 59825 1940 53803 504723;504724;504725 400308 400308 3117;3118 1 YDDMATCMK Unmodified 1133.4192 0.41915198 1214 P27348 YWHAQ 14-3-3 protein theta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 31.211 31.764 2 0.0054364 33517 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.732 68.216 45622000 0 0 0 0 0 0 0 0 0 0 8278000 9709700 0 6987300 20647000 59826 1214 53804 504726;504727;504728;504729 400309;400310;400311;400312 400309 4 YDDMLVVPIIENTPEEK Oxidation (M) 2019.9711 0.97107422 3860 Q96GX9 APIP Methylthioribulose-1-phosphate dehydratase yes yes 0 1 0 By MS/MS 10 0 1 1 84.897 85.076 2 8.5108E-09 98270 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.554 75.005 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59827 3860 53805 504730 400313 400313 5372 1 YDDYPENGVVQMNSR Unmodified 1785.7628 0.76281278 4002 Q96T88 UHRF1 E3 ubiquitin-protein ligase UHRF1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 55.584 55.741 2 0.00060706 62679 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.82 73.975 27771000 0 0 0 0 1599300 2529000 1985000 3116800 0 2815700 3721100 0 3310200 2057900 6635500 59828 4002 53806 504731;504732;504733;504734;504735;504736;504737;504738;504739;504740 400314;400315;400316;400317;400318 400316 5 YDDYSSSR Unmodified 991.3883 0.38830408 1395 P38159;Q96E39 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 10.623 10.739 2 0.0068434 9713 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 94.302 65.79 46189000 0 0 0 4469100 3486900 4753400 4775200 2847700 2722700 4120800 0 4933300 4635200 3917800 5526400 59829 1395 53807 504741;504742;504743;504744;504745;504746;504747;504748;504749;504750;504751 400319;400320;400321;400322;400323;400324;400325;400326;400327;400328;400329;400330;400331 400319 13 YDEAASYIQSK Unmodified 1273.5826 0.5826468 790 P04899 GNAI2 Guanine nucleotide-binding protein G(i) subunit alpha-2 yes yes 0 0 0 By MS/MS 2 0 1 1 43.039 37.891 2 1.1766E-05 49244 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.45 87.73 28992000 0 28992000 0 0 0 0 0 0 0 0 0 0 0 0 0 59830 790 53808 504752 400332 400332 1 YDEAIDCYTK Unmodified 1276.5282 0.52816838 4425 Q9H6T3 RPAP3 RNA polymerase II-associated protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 42.172 41.874 2 0.0026644 46917 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 81.338 67.342 112230000 0 51078000 0 0 3593200 4104100 3738500 0 0 7710500 8985100 8388900 7197500 6745500 10690000 59831 4425 53809 504753;504754;504755;504756;504757;504758;504759;504760;504761;504762;504763;504764 400333;400334;400335;400336;400337;400338;400339;400340;400341;400342;400343;400344 400335 11 YDECLAVYR Unmodified 1187.5281 0.5281088 578 O76094 SRP72 Signal recognition particle subunit SRP72 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 51.778 51.88 2 0.0036441 58399 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 108.46 93.685 130060000 0 0 0 10109000 5639900 0 7429300 6206200 10938000 11109000 17740000 29227000 17946000 13715000 0 59832 578 53810 504765;504766;504767;504768;504769;504770;504771;504772;504773;504774;504775 400345;400346;400347;400348;400349;400350;400351;400352;400353;400354;400355;400356;400357 400349 13 YDEEFQR Unmodified 985.41412 0.4141249 1754 P55060 CSE1L Exportin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 25.834 26.036 2 0.023336 27896 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 90.661 81.889 246950000 0 0 0 8194600 10250000 36015000 14482000 10244000 8027100 24276000 30107000 21208000 14517000 23905000 45721000 59833 1754 53811 504776;504777;504778;504779;504780;504781;504782;504783;504784;504785;504786;504787 400358;400359;400360;400361;400362;400363 400358 5 YDEELEGERPHSFR Unmodified 1762.7911 0.79107644 312 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 39.167 39.561 4 0.010843 42940 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.511 31.941 48005000 0 0 0 0 0 6337600 0 0 0 7999100 0 9309100 0 8402600 15956000 59834 312 53812 504788;504789;504790;504791;504792 400364 400364 1 YDEFHDYLERSYEGEEDTPMGLLLGGVK Unmodified 3261.4812 0.48122478 3903 Q96K76 USP47 Ubiquitin carboxyl-terminal hydrolase 47 yes yes 0 0 1 By MS/MS 2.33 0.471 2 1 3 97.794 91.203 3;4 3.5801E-79 116174 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 133.15 127.48 127690000 127690000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59835 3903 53813 504793;504794;504795 400365;400366;400367 400367 3 YDEIFLK Unmodified 926.47493 0.47493425 1457 P42566 EPS15 Epidermal growth factor receptor substrate 15 yes yes 0 0 0 By MS/MS 3 0 1 1 68.405 63.744 2 0.04973 78097 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 76.847 17.206 3709900 0 3709900 0 0 0 0 0 0 0 0 0 0 0 0 0 59836 1457 53814 504796 400368 400368 1 YDEIFYNLAPADGK Unmodified 1614.7566 0.75658842 4777 Q9NZN4 EHD2 EH domain-containing protein 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 80.731 80.536 2 8.7396E-05 93278 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 103.91 94.552 79896000 0 2425800 0 2212300 2168200 10828000 2455900 3570500 6100700 11204000 7339600 7383600 5120700 5143300 13943000 59837 4777 53815 504797;504798;504799;504800;504801;504802;504803;504804;504805;504806;504807;504808;504809 400369;400370;400371;400372;400373;400374;400375;400376;400377;400378;400379 400375 11 YDENMVLVSLLK Oxidation (M) 1438.7378 0.73776723 644 O95352 ATG7 Ubiquitin-like modifier-activating enzyme ATG7 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 91.773 88.082 2 0.0058118 109426 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.979 55.861 10943000 0 10559000 384190 0 0 0 0 0 0 0 0 0 0 0 0 59838 644 53816 504810;504811 400380 400380 783 1 YDENMVLVSLLK Unmodified 1422.7429 0.74285261 644 O95352 ATG7 Ubiquitin-like modifier-activating enzyme ATG7 yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 96.354 92.722 2 0.0065235 114719 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.014 60.076 16031000 0 15736000 294890 0 0 0 0 0 0 0 0 0 0 0 0 59839 644 53816 504812;504813 400381 400381 1 YDERPGPSPLPHR Unmodified 1519.7532 0.75317479 868 P08621 SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 31.173 31.362 3;4 0.00016559 33906 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 66.498 49.965 454000000 0 0 0 22791000 26540000 34006000 34366000 25743000 22915000 46622000 35561000 76495000 37891000 37962000 53113000 59840 868 53817 504814;504815;504816;504817;504818;504819;504820;504821;504822;504823;504824;504825;504826;504827;504828;504829;504830;504831;504832;504833;504834;504835;504836;504837 400382;400383;400384;400385;400386;400387;400388;400389;400390;400391;400392;400393;400394;400395;400396;400397;400398 400388 11 YDESDNAFIR Unmodified 1228.536 0.53603095 346 O43615 TIMM44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.874 48.037 2 5.5431E-06 53942 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 148.99 121.85 297850000 0 0 0 11064000 14822000 22365000 20665000 19652000 21403000 26719000 30894000 33263000 38065000 24848000 34095000 59841 346 53818 504838;504839;504840;504841;504842;504843;504844;504845;504846;504847;504848;504849 400399;400400;400401;400402;400403;400404;400405;400406;400407;400408;400409;400410;400411 400400 13 YDEVLHMVR Unmodified 1160.5648 0.56482866 1721 P53621 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.601 52.744 3 0.024114 58178 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.724 34.689 113430000 0 0 0 3010300 2830800 12277000 3856300 4736500 6288700 10454000 8382300 12203000 8325700 8604400 32459000 59842 1721 53819 504850;504851;504852;504853;504854;504855;504856;504857;504858;504859;504860;504861 400412;400413;400414 400412 3 YDEVRLDPNVQK Unmodified 1474.7416 0.74160705 2916 Q6P1J9 CDC73 Parafibromin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 4 2 12 1 4 1 1 1 1 1 1 1 1 1 1 1 1 1 47.076 45.345 2;3 3.6627E-05 49826 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.182 68.746 931570000 19905000 377600000 8884100 17228000 25038000 34400000 26864000 40646000 24627000 45460000 59110000 51273000 61495000 54370000 84667000 59843 2916 53820 504862;504863;504864;504865;504866;504867;504868;504869;504870;504871;504872;504873;504874;504875;504876;504877;504878;504879 400415;400416;400417;400418;400419;400420;400421;400422;400423;400424;400425;400426;400427;400428;400429;400430;400431;400432;400433 400420 19 YDFQNPSR Unmodified 1025.4567 0.45665842 3475 Q8TAQ2 SMARCC2 SWI/SNF complex subunit SMARCC2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 34.076 34.316 2 0.0081134 37638 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 87.323 65.191 125800000 0 0 0 5572900 0 7954400 8890400 8595700 7535400 12367000 14051000 17759000 10941000 11030000 21109000 59844 3475 53821 504880;504881;504882;504883;504884;504885;504886;504887;504888;504889;504890 400434;400435;400436;400437;400438;400439;400440;400441;400442 400439 9 YDGESDKEQFDDDQK Unmodified 1817.7228 0.72278168 2164 Q08AD1 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 25 20.912 3 0.00495 27516 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 52.887 47.065 8966300 0 8966300 0 0 0 0 0 0 0 0 0 0 0 0 0 59845 2164 53822 504891;504892 400443 400443 1 YDGFRESEFEK Unmodified 1405.615 0.61500956 2163 Q08945 SSRP1 FACT complex subunit SSRP1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.11 3.8 6 1 12 2 3 2 1 1 1 1 1 1 1 1 1 1 1 1 47.28 45.272 2;3 0.004229 49598 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.936 47.403 604770000 55424000 120020000 135200000 13026000 11342000 25229000 20725000 21787000 18476000 22958000 33742000 26930000 29325000 21060000 49522000 59846 2163 53823 504893;504894;504895;504896;504897;504898;504899;504900;504901;504902;504903;504904;504905;504906;504907;504908;504909;504910;504911 400444;400445;400446;400447;400448;400449;400450;400451;400452;400453;400454;400455;400456;400457 400447 11 YDGHLPIEIK Unmodified 1183.6237 0.62372375 1481 P43490 NAMPT Nicotinamide phosphoribosyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.57 3.68 7 16 3 1 3 2 1 1 1 1 1 1 1 2 1 2 2 66.29 64.567 2;3 0.0059974 85231 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.82 32.5 778170000 71741000 162890000 308750000 13272000 5503900 14340000 10646000 10480000 8752300 12903000 18559000 31793000 12375000 25653000 70511000 59847 1481 53824 504912;504913;504914;504915;504916;504917;504918;504919;504920;504921;504922;504923;504924;504925;504926;504927;504928;504929;504930;504931;504932;504933;504934 400458;400459;400460;400461;400462;400463;400464;400465;400466;400467 400461 9 YDGIILPGK Unmodified 974.54368 0.54368251 1929 P62913 RPL11 60S ribosomal protein L11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64.362 63.247 2 0.0036184 71802 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 109.86 87.731 1608000000 31667000 888690000 31065000 30849000 38015000 40593000 40724000 30877000 33459000 56975000 68492000 72641000 75181000 69254000 99516000 59848 1929 53825 504935;504936;504937;504938;504939;504940;504941;504942;504943;504944;504945;504946;504947;504948;504949 400468;400469;400470;400471;400472;400473;400474;400475;400476;400477;400478;400479;400480;400481;400482;400483 400480 14 YDGKWEVEEMK Unmodified 1412.6282 0.62821678 1227 P27824 CANX Calnexin yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 52.054 50.536 3 0.0042344 56730 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 44.612 35.867 155290000 3757800 0 4569800 0 20705000 0 0 20398000 0 0 23229000 39169000 0 0 43461000 59849 1227 53826 504950;504951;504952;504953;504954;504955;504956 400484;400485;400486;400487 400484 3 YDGKWEVEEMK Oxidation (M) 1428.6231 0.6231314 1227 P27824 CANX Calnexin yes yes 0 1 1 By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 36.517 36.698 3 0.027283 39456 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 43.68 40.593 181540000 0 0 0 14783000 10871000 10955000 12784000 12624000 11730000 14709000 14161000 25685000 24706000 16243000 12294000 59850 1227 53826 504957;504958;504959;504960;504961;504962;504963;504964;504965;504966;504967;504968 400488 400488 0 YDGLVGMFDPK Oxidation (M) 1256.5747 0.57472465 961 P12081;P49590 HARS;HARS2 Histidine--tRNA ligase, cytoplasmic;Probable histidine--tRNA ligase, mitochondrial yes no 0 1 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 2 1 1 2 1 1 1 69.639 69.72 2 0.0041467 79159 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.916 45.405 29890000 0 0 0 5580600 0 0 0 2518600 0 0 3622500 9235100 2279400 1774800 4879400 59851 961 53827 504969;504970;504971;504972;504973;504974;504975;504976;504977 400489;400490;400491;400492;400493;400494 400489 1257 6 YDGQVAVFGSDLQEK Unmodified 1654.7839 0.7838658 1137 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 70.643 70.897 2 2.6806E-50 80969 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 221.56 212.86 193810000 0 0 0 0 0 0 0 10808000 0 15948000 30787000 31462000 0 25383000 79417000 59852 1137 53828 504978;504979;504980;504981;504982;504983 400495;400496;400497;400498;400499;400500;400501;400502;400503 400497 9 YDGSTIVPGEQGAEYQHFIQQCTDDVR Unmodified 3112.3832 0.38324207 2363 Q14019 COTL1 Coactosin-like protein yes yes 0 0 0 By MS/MS 10 0 1 1 79.89 80.119 3 7.0561E-18 92203 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.943 49.42 16500000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16500000 59853 2363 53829 504984 400504 400504 1 YDGVDAGK Unmodified 823.3712 0.37119746 2057 Q01581 HMGCS1 Hydroxymethylglutaryl-CoA synthase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 12.263 11.321 2 0.012174 12804 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.37 61.647 104500000 9190700 84043000 0 0 0 2015000 2036000 0 0 1961000 0 0 1054100 0 4202000 59854 2057 53830 504985;504986;504987;504988;504989;504990;504991 400505;400506;400507;400508 400507 4 YDIDLPNK Unmodified 976.48656 0.48656157 132 O00244 ATOX1 Copper transport protein ATOX1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 5.67 3.89 4 1 4 1 3 1 1 1 1 1 56.107 53.132 2 0.012091 65145 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 100.19 41.207 2043100000 50233000 1912100000 9406400 0 0 0 2089500 0 0 0 21168000 19985000 0 0 28110000 59855 132 53831 504992;504993;504994;504995;504996;504997;504998;504999;505000 400509;400510;400511;400512;400513;400514;400515;400516;400517;400518 400513 10 YDIDLPNKK Unmodified 1104.5815 0.58152458 132 O00244 ATOX1 Copper transport protein ATOX1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 48.642 43.848 2 0.0042441 57071 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 119.41 105.4 69963000 0 67212000 2750700 0 0 0 0 0 0 0 0 0 0 0 0 59856 132 53832 505001;505002 400519 400519 1 YDIPATAATATSPTPNPVPSVPANPPK Unmodified 2673.365 0.36499645 1663 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.64 1.76 1 24 1 2 2 2 2 2 2 2 2 2 2 2 2 79.256 79.349 2;3 7.2465E-60 90167 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 68.309 65.732 1167000000 0 25049000 0 40527000 73751000 92596000 91802000 94364000 71136000 119560000 92536000 137030000 95631000 104380000 128660000 59857 1663 53833 505003;505004;505005;505006;505007;505008;505009;505010;505011;505012;505013;505014;505015;505016;505017;505018;505019;505020;505021;505022;505023;505024;505025;505026;505027 400520;400521;400522;400523;400524;400525;400526;400527;400528;400529;400530;400531;400532;400533;400534 400521 15 YDIRIPEDLDEITGK Unmodified 1775.8941 0.89414453 2376 Q14149 MORC3 MORC family CW-type zinc finger protein 3 yes yes 0 0 1 By MS/MS 2 0 1 1 88.85 80.719 3 0.0032356 105004 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.768 45.506 8145300 8145300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59858 2376 53834 505028 400535 400535 1 YDKDEVDLLIVIGSSLK Unmodified 1906.0299 0.02990973 3808 Q96EB6 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 99.115 93.286 3 0.00027986 118013 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.129 61.559 10378000 10378000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59859 3808 53835 505029;505030 400536;400537 400537 2 YDLDACDIQEK Unmodified 1368.5867 0.5867459 234 O14976 GAK Cyclin-G-associated kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 51.291 50.593 2 7.0887E-06 57484 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 123.75 109.08 155110000 0 23038000 0 0 15729000 0 18334000 24908000 0 0 0 0 30702000 18380000 24019000 59860 234 53836 505031;505032;505033;505034;505035;505036;505037;505038;505039;505040;505041;505042 400538;400539;400540;400541;400542;400543;400544;400545;400546;400547;400548;400549;400550 400539 13 YDLFSDDYDTSEK Unmodified 1596.6468 0.6467632 327 O43426 SYNJ1 Synaptojanin-1 yes yes 0 0 0 By MS/MS 2 0 1 1 74.016 68.861 2 0.0023209 86495 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.229 92.212 17403000 0 17403000 0 0 0 0 0 0 0 0 0 0 0 0 0 59861 327 53837 505043 400551 400551 1 YDLFVGSQATDFGEALVRHDEF Unmodified 2515.1656 0.16556836 376 O43852 CALU Calumenin yes yes 0 0 1 By MS/MS By MS/MS 2.67 0.471 1 2 1 2 97.022 93.171 3 2.992E-12 96344 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 89.483 85.044 37705000 5501700 32204000 0 0 0 0 0 0 0 0 0 0 0 0 0 59862 376 53838 505044;505045;505046 400552;400553;400554 400553 3 YDLILDEQAEDSK Unmodified 1537.7148 0.71478318 3537 Q8WUA2 PPIL4 Peptidyl-prolyl cis-trans isomerase-like 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 68.064 67.209 2 2.7487E-09 84492 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.22 85.58 124340000 0 102020000 0 1570300 2430300 3151200 0 0 0 3123700 8394700 0 0 0 3647900 59863 3537 53839 505047;505048;505049;505050;505051;505052;505053 400555;400556;400557;400558;400559;400560;400561 400557 7 YDLSPITVK Unmodified 1034.5648 0.56481189 3729 Q969X5 ERGIC1 Endoplasmic reticulum-Golgi intermediate compartment protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.615 65.702 2 0.02892 74536 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.794 31.867 67791000 0 0 0 3406500 4652600 3425300 4924700 5693500 3221800 5856300 5915100 9774800 7490900 5955000 7474600 59864 3729 53840 505054;505055;505056;505057;505058;505059;505060;505061;505062;505063;505064;505065 400562;400563;400564 400562 3 YDLTVPFAR Unmodified 1080.5604 0.56039521 961 P12081;P49590 HARS;HARS2 Histidine--tRNA ligase, cytoplasmic;Probable histidine--tRNA ligase, mitochondrial yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.089 79.149 2 0.0043294 91035 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.181 63.026 164220000 0 0 0 10324000 4296200 7713900 6303200 11349000 4890600 7343000 17167000 22566000 8172700 16792000 47302000 59865 961 53841 505066;505067;505068;505069;505070;505071;505072;505073;505074;505075;505076;505077 400565;400566;400567;400568;400569;400570;400571;400572;400573;400574;400575;400576 400568 11 YDNGSGYR Unmodified 930.38316 0.38315913 2152 Q08211 DHX9 ATP-dependent RNA helicase A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 8.8259 8.959 2 0.031953 7400 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 54.611 40.55 23027000 0 0 0 1955700 1424600 2106700 1733500 1375800 1247000 1060300 3264900 2003200 1869600 1540300 3445700 59866 2152 53842 505078;505079;505080;505081;505082;505083;505084;505085;505086;505087;505088;505089 400577;400578 400578 2 YDNLEMEYLQK Unmodified 1444.6544 0.65443153 3548 Q8WUM0 NUP133 Nuclear pore complex protein Nup133 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 69.256 69.363 2 0.0025343 79131 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.831 58.8 24952000 0 0 0 2711300 0 0 2528200 0 0 0 0 4708000 0 4858200 10146000 59867 3548 53843 505090;505091;505092;505093;505094 400579;400580;400581 400580 3 YDNLITPVVDSLK Unmodified 1475.7872 0.78716026 3465 Q8NI27 THOC2 THO complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 86.683 86.28 2 5.9791E-10 107247 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.54 102.64 107820000 0 75531000 0 0 1447200 2114400 0 3065400 2600700 6005200 3374500 0 2690900 3931600 7063700 59868 3465 53844 505095;505096;505097;505098;505099;505100;505101;505102;505103;505104 400582;400583;400584;400585;400586;400587;400588 400585 7 YDNMAELFAVVK Unmodified 1398.6853 0.68533773 4952 Q9UK41 VPS28 Vacuolar protein sorting-associated protein 28 homolog yes yes 0 0 0 By MS/MS By matching 2 0 2 1 1 94.203 90.523 2 0.00026786 112524 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.93 102.7 49614000 0 48879000 734680 0 0 0 0 0 0 0 0 0 0 0 0 59869 4952 53845 505105;505106 400589 400589 1 YDNMAELFAVVK Oxidation (M) 1414.6803 0.68025235 4952 Q9UK41 VPS28 Vacuolar protein sorting-associated protein 28 homolog yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 78.886 79.002 2 0.007157 90240 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 46.001 34.511 46789000 0 0 0 0 0 0 0 0 0 0 0 0 0 46789000 0 59870 4952 53845 505107;505108 400590;400591 400591 6299 2 YDPDPAPHMENLK Unmodified 1525.6871 0.68712864 3884 Q96IY1 NSL1 Kinetochore-associated protein NSL1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 48.27 47.242 3 0.0029517 53061 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 50.286 42.546 116980000 0 80952000 0 0 2562400 5826800 0 0 3029800 0 8356700 0 5254000 3607900 7389800 59871 3884 53846 505109;505110;505111;505112;505113;505114;505115;505116;505117 400592;400593;400594 400594 3 YDPGALVIPFSGALELK Unmodified 1788.9662 0.96618726 4636 Q9NTK5 OLA1 Obg-like ATPase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 1 4 1 99.189 94.51 2;3 0.00047345 117291 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.44 92.075 248200000 16384000 224470000 7345700 0 0 0 0 0 0 0 0 0 0 0 0 59872 4636 53847 505118;505119;505120;505121;505122;505123 400595;400596;400597;400598;400599;400600 400595 5 YDPPLEDGAMPSAR Oxidation (M) 1533.677 0.67695789 1525 P47756 CAPZB F-actin-capping protein subunit beta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 46.801 46.187 2 0.00022455 52143 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 77.64 51.126 199690000 0 50669000 0 9064300 9218100 16400000 8055600 7649500 16920000 12090000 17108000 16227000 10620000 9361800 16302000 59873 1525 53848 505124;505125;505126;505127;505128;505129;505130;505131;505132;505133;505134;505135;505136;505137 400601;400602;400603;400604;400605;400606;400607;400608;400609;400610;400611;400612;400613 400602 2427 12 YDPPLEDGAMPSAR Unmodified 1517.682 0.68204326 1525 P47756 CAPZB F-actin-capping protein subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 60.312 59.955 2 9.6019E-05 68760 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 101.93 73.202 513880000 0 144640000 0 18035000 17635000 30917000 17493000 19790000 20069000 28852000 42580000 37001000 29658000 32781000 74430000 59874 1525 53848 505138;505139;505140;505141;505142;505143;505144;505145;505146;505147;505148;505149;505150 400614;400615;400616;400617;400618;400619;400620;400621;400622;400623;400624;400625;400626;400627 400627 14 YDPTIEDFYRK Unmodified 1445.6827 0.68269519 5170 Q9Y3L5;P61225;P10114 RAP2C;RAP2B;RAP2A Ras-related protein Rap-2c;Ras-related protein Rap-2b;Ras-related protein Rap-2a yes no 0 0 1 By MS/MS 2 0 1 1 68.962 65.282 3 0.040877 80874 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 29.341 19.807 3081000 0 0 3081000 0 0 0 0 0 0 0 0 0 0 0 0 59875 5170 53849 505151 400628;400629 400629 2 YDPTIEDSYRK Unmodified 1385.6463 0.64630969 1840;1914 P61224;P62834 RAP1B;RAP1A Ras-related protein Rap-1b;Ras-related protein Rap-1A no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 36.673 35.918 3 0.0021143 38695 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 56.225 47.336 543870000 0 159300000 7130600 0 21029000 20024000 19765000 30320000 14717000 39825000 38276000 46089000 40487000 40656000 66252000 59876 1840;1914 53850 505152;505153;505154;505155;505156;505157;505158;505159;505160;505161;505162;505163;505164;505165;505166 400630;400631;400632;400633;400634;400635;400636;400637;400638;400639;400640;400641 400639 11 YDQNYDIR Unmodified 1085.4778 0.47778779 128 O00203;Q13367 AP3B1;AP3B2 AP-3 complex subunit beta-1;AP-3 complex subunit beta-2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 31.395 31.704 2 0.016501 34123 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 67.169 57.258 40551000 0 0 0 0 4745900 0 3422500 0 0 0 5569700 8102900 5676400 5365900 7667100 59877 128 53851 505167;505168;505169;505170;505171;505172;505173 400642 400642 1 YDQNYDIRDR Unmodified 1356.6058 0.60584185 128 O00203;Q13367 AP3B1;AP3B2 AP-3 complex subunit beta-1;AP-3 complex subunit beta-2 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.334 28.529 3 0.009636 29959 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.05 84.208 256060000 0 0 0 13689000 13915000 19254000 16041000 19329000 17343000 31940000 22995000 30425000 14778000 25784000 30569000 59878 128 53852 505174;505175;505176;505177;505178;505179;505180;505181;505182;505183;505184;505185 400643;400644;400645;400646;400647;400648;400649;400650;400651 400645 6 YDSGIPPYSRASLK Unmodified 1552.7886 0.78855725 2266 Q13303 KCNAB2 Voltage-gated potassium channel subunit beta-2 yes yes 0 0 1 By MS/MS 2 0 1 1 59.639 51.414 3 0.042786 70159 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 26.359 17.538 9691200 9691200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59879 2266 53853 505186 400652 400652 1 YDSIPVSTSLLGDTSDTTSTGLAQR Unmodified 2584.2504 0.2504202 2733 Q5JS54 PSMG4 Proteasome assembly chaperone 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 83.325 83.452 3 2.3287E-27 96394 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.509 81.005 53056000 0 0 0 0 0 6673600 0 0 0 5018300 9354700 8793600 0 5747200 17469000 59880 2733 53854 505187;505188;505189;505190;505191;505192 400653;400654;400655;400656;400657;400658 400654 6 YDSNSGGEREIQR Unmodified 1509.6808 0.68079771 1875 P62191 PSMC1 26S protease regulatory subunit 4 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 14.106 14.37 3 0.0055999 13631 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 44.616 31.479 17230000 0 0 0 0 2981700 0 0 0 666740 0 2568500 6458600 2080600 0 2474100 59881 1875 53855 505193;505194;505195;505196;505197;505198 400659 400659 1 YDSQVAEENR Unmodified 1209.5262 0.52619455 450 O60942 RNGTT mRNA-capping enzyme;Polynucleotide 5'-triphosphatase;mRNA guanylyltransferase yes yes 0 0 0 By MS/MS 10 0 1 1 15.714 16.226 2 0.0018051 15688 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 88.496 75.869 4939400 0 0 0 0 0 0 0 0 0 0 0 4939400 0 0 0 59882 450 53856 505199 400660 400660 1 YDSSREAGTVK Unmodified 1211.5782 0.57823012 3887 Q96J01 THOC3 THO complex subunit 3 yes yes 0 0 1 By MS/MS 3 0 1 1 10.526 7.1543 2 0.023081 9448 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 94.692 48.302 14759000 0 14759000 0 0 0 0 0 0 0 0 0 0 0 0 0 59883 3887 53857 505200 400661 400661 0 YDSYESCDSR Unmodified 1280.4615 0.46154538 5011 Q9ULX6 AKAP8L A-kinase anchor protein 8-like yes yes 0 0 0 By MS/MS By matching By matching By matching 10 0 4 1 1 1 1 15.121 15.315 2 0.040428 14937 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 47.198 47.198 8252400 0 0 0 0 945370 0 2177000 0 0 0 2216700 0 0 0 2913300 59884 5011 53858 505201;505202;505203;505204 400662 400662 1 YDSYSRFLK Unmodified 1177.5768 0.57677356 351 O43665 RGS10 Regulator of G-protein signaling 10 yes yes 0 0 1 By MS/MS 2 0 1 1 59.977 51.751 3 0.0098249 70221 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.92 57.689 20556000 20556000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59885 351 53859 505205 400663 400663 1 YDTALNLLK Unmodified 1049.5757 0.57571092 3467 Q8NI36 WDR36 WD repeat-containing protein 36 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 73.575 73.698 2 0.0049392 84903 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 85.212 56.313 90228000 0 0 0 0 4700200 5871100 6080400 6472300 7637000 7552900 11039000 11937000 9367900 6695200 12875000 59886 3467 53860 505206;505207;505208;505209;505210;505211;505212;505213;505214;505215;505216 400664;400665;400666;400667;400668;400669;400670;400671;400672 400671 9 YDTDFYILDK Unmodified 1291.5972 0.59723423 1009 P14868 DARS Aspartate--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 79.348 78.636 2 0.0029629 91120 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 90.15 47.863 178380000 48851000 0 13008000 3814300 3471600 12066000 5525900 8163300 7056700 10169000 12168000 9991900 6705600 9036300 28355000 59887 1009 53861 505217;505218;505219;505220;505221;505222;505223;505224;505225;505226;505227;505228;505229;505230;505231;505232;505233 400673;400674;400675;400676;400677;400678;400679;400680;400681;400682;400683;400684;400685;400686;400687;400688;400689;400690;400691 400673 19 YDTGASTTGSK Unmodified 1086.4829 0.48293275 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 7.4686 7.5842 2 0.0075505 5784 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 53.751 17.356 20375000 0 0 0 1353500 1427600 1983500 1886700 2973700 1800200 0 3345700 0 1794700 2138000 1671200 59888 5262 53862 505234;505235;505236;505237;505238;505239;505240;505241;505242;505243 400692;400693;400694 400692 2 YDTPFIFAEVNSDK Unmodified 1644.7672 0.7671531 1146 P22735 TGM1 Protein-glutamine gamma-glutamyltransferase K yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 86.064 86.122 2 0.00037061 99751 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 77.64 61.442 62583000 0 0 0 9045100 3870900 4365600 2910100 10709000 3329100 7307300 4934600 8866300 4423200 2821900 0 59889 1146 53863 505244;505245;505246;505247;505248;505249;505250;505251;505252;505253;505254;505255 400695;400696;400697;400698;400699;400700;400701;400702;400703;400704;400705;400706 400695 12 YDVFQDFESEK Unmodified 1405.6038 0.60377617 3493 Q8TCX1 DYNC2LI1 Cytoplasmic dynein 2 light intermediate chain 1 yes yes 0 0 0 By MS/MS 2 0 1 1 81.192 76.487 2 0.010512 95231 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.19 57.609 23839000 0 23839000 0 0 0 0 0 0 0 0 0 0 0 0 0 59890 3493 53864 505256 400707 400707 1 YDVGGGERFDSLTDLVEHYK Unmodified 2299.0757 0.075690724 2122 Q06124 PTPN11 Tyrosine-protein phosphatase non-receptor type 11 yes yes 0 0 1 By MS/MS 2 0 1 1 90.913 82.782 4 7.5089E-05 107410 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 60.034 56.891 36817000 36817000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59891 2122 53865 505257 400708 400708 1 YDVIGDQEHLR Unmodified 1343.647 0.64697839 1523 P47736 RAP1GAP Rap1 GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 45.265 45.538 3 0.027063 51006 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 36.417 27.904 30165000 0 0 0 0 3600900 4279900 0 0 0 6429100 6181800 3625600 0 0 6047600 59892 1523 53866 505258;505259;505260;505261;505262;505263 400709;400710 400710 2 YDVQHNGSLK Unmodified 1159.5622 0.56218613 317 O43314 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 yes yes 0 0 0 By MS/MS 2 0 1 1 22.765 18.739 2 0.010526 24800 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.376 52.848 13833000 0 13833000 0 0 0 0 0 0 0 0 0 0 0 0 0 59893 317 53867 505264 400711 400711 1 YDWDLLAAR Unmodified 1121.5506 0.55055881 2481 Q15029 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.386 82.447 2 0.0051747 94610 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 81.296 73.365 136720000 0 0 0 3171800 3630300 11416000 5570600 8907800 9018100 13339000 10437000 11109000 12364000 12090000 35662000 59894 2481 53868 505265;505266;505267;505268;505269;505270;505271;505272;505273;505274;505275;505276 400712;400713;400714;400715;400716;400717;400718;400719;400720;400721;400722 400718 11 YDWYQTESQVVITLMIK Unmodified 2116.0551 0.055078623 5131 Q9Y2Z0 SUGT1 Suppressor of G2 allele of SKP1 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 100.68 92.55 3 0.020955 119221 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 29.687 26.138 3783500 3783500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59895 5131 53869 505277 400723 400723 1 YDYEEVEAEGANK Unmodified 1515.6365 0.63653286 1380 P36871 PGM1 Phosphoglucomutase-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 44.157 44.708 2 1.5407E-11 49882 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 147.74 136.99 90282000 0 0 0 0 0 0 0 0 0 0 14874000 15150000 0 10288000 49970000 59896 1380 53870 505278;505279;505280;505281 400724;400725;400726;400727 400725 4 YDYNSGEELESYK Unmodified 1595.6627 0.66274761 5167 Q9Y3F4 STRAP Serine-threonine kinase receptor-associated protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.39 3.71 1 3 2 12 3 3 1 1 1 1 1 1 1 1 1 1 1 1 56.203 55.187 2 1.2389E-29 66925 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 162.36 157.42 1471500000 71459000 1199100000 0 12206000 11918000 9119000 12678000 12017000 6291600 11477000 29184000 17605000 9668100 27318000 41468000 59897 5167 53871 505282;505283;505284;505285;505286;505287;505288;505289;505290;505291;505292;505293;505294;505295;505296;505297;505298;505299 400728;400729;400730;400731;400732;400733;400734;400735;400736;400737;400738;400739;400740;400741;400742;400743;400744 400737 17 YDYQRQPDSGISSIR Unmodified 1783.8489 0.84892567 788 P04843 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 46.307 46.484 3 2.8372E-14 52385 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 98.507 86.484 193480000 0 0 0 16183000 13373000 0 13042000 14920000 14117000 19517000 23683000 27830000 19756000 14065000 16990000 59898 788 53872 505300;505301;505302;505303;505304;505305;505306;505307;505308;505309;505310 400745;400746;400747;400748;400749;400750;400751;400752;400753;400754;400755;400756;400757 400752 13 YDYVFPENGLVAYK Unmodified 1676.8086 0.80862399 272 O15305 PMM2 Phosphomannomutase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 6.56 3.86 3 1 5 3 1 1 1 1 1 1 84.889 83.266 2;3 2.6616E-29 103287 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.48 122.32 654710000 0 619060000 9393200 0 0 1561100 1561900 0 0 0 6070400 5241200 0 0 11826000 59899 272 53873 505311;505312;505313;505314;505315;505316;505317;505318;505319 400758;400759;400760;400761;400762;400763;400764;400765;400766 400760 9 YDYVLTGYTR Unmodified 1249.5979 0.59790293 181 O00764 PDXK Pyridoxal kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 63.849 64.039 2 0.0014457 73630 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 92.062 62.976 102220000 0 0 0 0 1340200 0 2082800 0 0 0 13780000 18058000 6587200 13605000 46763000 59900 181 53874 505320;505321;505322;505323;505324;505325;505326 400767;400768;400769;400770;400771;400772;400773 400771 7 YDYVLTGYTRDK Unmodified 1492.7198 0.71980898 181 O00764 PDXK Pyridoxal kinase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 2 3 2 61.434 55.617 2;3 5.4783E-05 69134 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 103.08 89.68 234770000 38938000 90805000 105030000 0 0 0 0 0 0 0 0 0 0 0 0 59901 181 53875 505327;505328;505329;505330;505331;505332;505333 400774;400775;400776;400777;400778;400779;400780 400780 6 YEAAGEAVK Unmodified 936.45526 0.45526144 265 O15226 NKRF NF-kappa-B-repressing factor yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 16.144 16.439 2 0.0099526 14980 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 65.246 31.889 32874000 0 0 0 0 0 3350700 0 2436300 0 3252000 3883900 3806700 5664200 5941000 4538700 59902 265 53876 505334;505335;505336;505337;505338;505339;505340;505341 400781;400782;400783;400784;400785 400784 5 YEAAGTLVTLSSAPTAIK Unmodified 1791.9618 0.96183016 1720 P53618 COPB1 Coatomer subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.26 3.26 5 1 21 1 3 2 2 1 1 2 2 2 2 2 2 1 2 2 80.934 80.035 2;3 5.4978E-53 99077 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 143.94 134.99 2049200000 16297000 1489700000 18623000 11650000 20384000 42420000 27648000 33176000 21295000 74358000 47039000 65711000 26394000 49538000 104950000 59903 1720 53877 505342;505343;505344;505345;505346;505347;505348;505349;505350;505351;505352;505353;505354;505355;505356;505357;505358;505359;505360;505361;505362;505363;505364;505365;505366;505367;505368 400786;400787;400788;400789;400790;400791;400792;400793;400794;400795;400796;400797;400798;400799;400800;400801;400802;400803;400804 400790 17 YEAIIQNLEK Unmodified 1219.6449 0.64485312 3509 Q8TDY2 RB1CC1 RB1-inducible coiled-coil protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 72.985 67.44 2 0.00067659 85375 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 133.13 110.06 27749000 0 27749000 0 0 0 0 0 0 0 0 0 0 0 0 0 59904 3509 53878 505369 400805 400805 1 YEAIQLTFK Unmodified 1111.5914 0.59136099 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.53 3 2 11 2 2 1 1 1 1 1 1 1 1 1 1 1 1 76.49 75.237 2 0.00045211 93736 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.98 101.91 92280000 13061000 41432000 0 0 1567000 4664500 2420200 1991800 3666400 4374300 3233700 3310000 1926200 2878400 7754400 59905 5071 53879 505370;505371;505372;505373;505374;505375;505376;505377;505378;505379;505380;505381;505382;505383;505384;505385 400806;400807;400808;400809;400810;400811;400812;400813;400814;400815;400816;400817 400809 12 YEAIVEENK Unmodified 1093.5292 0.52915466 4005 Q99417 MYCBP C-Myc-binding protein yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 33.717 29.139 2 0.013725 36388 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 82.75 50.796 319490000 0 319490000 0 0 0 0 0 0 0 0 0 0 0 0 0 59906 4005 53880 505386;505387 400818;400819 400819 2 YEAIVEENKK Unmodified 1221.6241 0.62411768 4005 Q99417 MYCBP C-Myc-binding protein yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.32 3.11 2 3 17 1 4 1 2 1 2 1 1 1 2 1 1 2 2 22.756 21.942 2;3 0.0014087 22621 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 73.067 49.691 345860000 143590 89633000 0 9566700 14390000 12523000 17427000 12997000 10978000 17155000 33483000 40000000 19626000 22840000 45098000 59907 4005 53881 505388;505389;505390;505391;505392;505393;505394;505395;505396;505397;505398;505399;505400;505401;505402;505403;505404;505405;505406;505407;505408;505409 400820;400821;400822;400823;400824;400825;400826;400827;400828;400829;400830;400831;400832;400833;400834;400835;400836;400837 400826 13 YEALRAPVTQPR Unmodified 1399.7572 0.75719754 3321 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 43.156 43.383 3 0.032861 48514 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 32.933 21.72 41570000 0 0 0 0 4948000 0 5279500 0 0 0 9365200 0 7475300 5498300 9003200 59908 3321 53882 505410;505411;505412;505413;505414;505415 400838 400838 1 YEAPQATDGLAGALDAR Unmodified 1717.8271 0.8271276 431 O60784 TOM1 Target of Myb protein 1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 72.813 72.9 2 1.6399E-13 84351 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 93.011 75.985 76584000 0 0 0 9312100 0 15225000 0 4432900 0 8854900 7213800 9487200 5523300 0 16535000 59909 431 53883 505416;505417;505418;505419;505420;505421;505422;505423;505424 400839;400840;400841;400842;400843;400844;400845 400843 7 YEAQGSLTK Unmodified 995.49238 0.49237523 4900 Q9UHF7 TRPS1 Zinc finger transcription factor Trps1 yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 17.306 17.546 2 0.031369 17159 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 79.906 45.903 24501000 0 0 0 1404800 0 1240300 1311600 0 0 0 7808500 2603300 0 7289200 2842900 59910 4900 53884 505425;505426;505427;505428;505429;505430;505431 400846 400846 0 YEASILTHDSSIR Unmodified 1490.7365 0.73652168 759 P02679 FGG Fibrinogen gamma chain yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 52.283 52.044 3 0.0014612 58680 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 59.306 46.886 35837000 0 0 0 11652000 0 0 0 24185000 0 0 0 0 0 0 0 59911 759 53885 505432;505433 400847;400848;400849 400847 3 YEAWLAEAESR Unmodified 1323.6095 0.60953025 2555 Q15642 TRIP10 Cdc42-interacting protein 4 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 67.64 67.879 2 0.0040978 77180 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.303 41.973 14818000 0 0 0 0 0 6576500 0 0 0 0 0 0 0 0 8241800 59912 2555 53886 505434;505435 400850;400851 400851 2 YECEIQASRQHCESEK Unmodified 2052.8629 0.86293753 2751 Q5PSV4 BRMS1L Breast cancer metastasis-suppressor 1-like protein yes yes 0 0 1 By MS/MS 2 0 2 2 21.1 18.297 3;4 0.013178 23359 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 39.033 38.817 12883000 0 0 12883000 0 0 0 0 0 0 0 0 0 0 0 0 59913 2751 53887 505436;505437 400852;400853 400852 2 YECELQGAK Unmodified 1096.4859 0.48590964 4522 Q9HCU9 BRMS1 Breast cancer metastasis-suppressor 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 23.148 22.76 2 0.0036746 22868 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 89.296 65.772 38471000 0 15956000 0 0 1673500 0 0 3452900 2573800 0 3941200 0 0 4464400 6408900 59914 4522 53888 505438;505439;505440;505441;505442;505443;505444 400854;400855;400856;400857;400858 400858 5 YEDAVQFIR Unmodified 1139.5611 0.56112349 2218;3710 Q12974;Q93096 PTP4A2;PTP4A1 Protein tyrosine phosphatase type IVA 2;Protein tyrosine phosphatase type IVA 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 64.968 65.159 2 0.00034935 73652 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 147.52 78.604 414100000 0 0 0 0 0 47144000 39512000 0 34066000 49447000 67258000 71429000 62003000 43236000 0 59915 2218;3710 53889 505445;505446;505447;505448;505449;505450;505451;505452 400859;400860;400861;400862;400863;400864;400865;400866;400867 400864 9 YEDAVQFIRQK Unmodified 1395.7147 0.71466402 2218;3710 Q12974;Q93096 PTP4A2;PTP4A1 Protein tyrosine phosphatase type IVA 2;Protein tyrosine phosphatase type IVA 1 no no 0 0 1 By MS/MS 2 0 1 1 65.367 57.079 3 0.002546 76706 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.841 58.977 10921000 10921000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59916 2218;3710 53890 505453 400868 400868 1 YEDAYQYQNIFGPLVK Unmodified 1946.9414 0.94142907 3683 Q92900 UPF1 Regulator of nonsense transcripts 1 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 89.09 89.218 2 0.00083595 103528 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 57.492 51.389 8578300 0 0 0 0 0 0 0 0 0 2212700 0 0 0 0 6365600 59917 3683 53891 505454;505455 400869 400869 1 YEDDITNR Unmodified 1024.4462 0.44615331 3970 Q96RL7 VPS13A Vacuolar protein sorting-associated protein 13A yes yes 0 0 0 By matching By matching By matching By MS/MS By matching By matching 10 0 6 1 1 1 1 1 1 21.244 21.515 2 0.0087714 22007 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 85.064 66.333 25442000 0 0 0 0 0 0 3858800 3643000 0 4191500 0 8295700 3229700 2222900 0 59918 3970 53892 505456;505457;505458;505459;505460;505461 400870 400870 1 YEDDVTDPK Unmodified 1080.4611 0.46113468 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.613 20.817 2 0.0088711 20323 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 68.371 55.411 186890000 0 0 0 8035500 10650000 16944000 8546700 13655000 12918000 19248000 21518000 19812000 20620000 20018000 14923000 59919 3023 53893 505462;505463;505464;505465;505466;505467;505468;505469;505470;505471;505472;505473 400871;400872;400873;400874;400875;400876;400877;400878;400879 400877 9 YEDEINK Unmodified 909.40798 0.40797689 79;780;74;66;58;779;67;103;80;96;51;960;2056;83;50;53;105 CON__ENSEMBL:ENSBTAP00000038253;P04264;CON__P04264;CON__P35908v2;P35908;CON__P35908;P04259;CON__Q7Z794;Q7Z794;CON__H-INV:HIT000292931;CON__P05787;P05787;CON__Q9H552;CON__H-INV:HIT000016045;CON__P50446;CON__Q8BGZ7;CON__Q01546;P12035;CON__P12035;Q01546;CON__P13647;P13647;CON__O95678;O95678;CON__P02538;P02538;CON__P04259;CON__Q5XKE5;Q5XKE5 KRT1;KRT2;KRT6B;KRT77;KRT8;KRT3;KRT76;KRT5;KRT75;KRT6A;KRT79 Keratin, type II cytoskeletal 1;Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 1b;Keratin, type II cytoskeletal 8;Keratin, type II cytoskeletal 3;Keratin, type II cytoskeletal 2 oral;Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 79 no no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.91 2.73 1 3 2 37 3 2 1 3 4 4 4 4 2 3 2 3 3 3 2 17.03 16.851 1;2 0.012018 93438 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 125.08 69.059 + 61543000000 224110000 1198500000 10553000 9785600000 2490500000 4666200000 3120000000 4568700000 3506800000 5202400000 6859000000 4334000000 8247800000 4620900000 2708100000 59920 50;780;79;779;103;51;67;80;105;83;960;2056;74;53;58;66;96 53894 505474;505475;505476;505477;505478;505479;505480;505481;505482;505483;505484;505485;505486;505487;505488;505489;505490;505491;505492;505493;505494;505495;505496;505497;505498;505499;505500;505501;505502;505503;505504;505505;505506;505507;505508;505509;505510;505511;505512;505513;505514;505515;505516 400880;400881;400882;400883;400884;400885;400886;400887;400888;400889;400890;400891;400892;400893;400894;400895;400896;400897;400898;400899;400900;400901;400902;400903;400904;400905;400906;400907 400895 25 YEDEINKR Unmodified 1065.5091 0.50908792 79;780;74;66;58;779;67;103;80;960;2056;83;50;53;105 CON__ENSEMBL:ENSBTAP00000038253;P04264;CON__P04264;CON__P35908v2;P35908;CON__P35908;P04259;CON__Q7Z794;Q7Z794;CON__P05787;P05787;CON__H-INV:HIT000016045;CON__P50446;CON__Q8BGZ7;CON__Q01546;P12035;CON__P12035;Q01546;CON__P13647;P13647;CON__O95678;O95678;CON__P02538;P02538;CON__P04259 KRT1;KRT2;KRT6B;KRT77;KRT8;KRT3;KRT76;KRT5;KRT75;KRT6A Keratin, type II cytoskeletal 1;Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 1b;Keratin, type II cytoskeletal 8;Keratin, type II cytoskeletal 3;Keratin, type II cytoskeletal 2 oral;Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 6A no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 2 1 1 1 2 1 2 1 2 2 1 1 13.576 13.741 2 2.8755E-35 17363 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 186.43 111.12 + 6862600000 0 0 0 519280000 266580000 335190000 221630000 1893300000 427830000 467220000 204810000 1501100000 669470000 289010000 67122000 59921 50;780;79;779;103;67;80;105;83;960;2056;74;53;58;66 53895 505517;505518;505519;505520;505521;505522;505523;505524;505525;505526;505527;505528;505529;505530;505531;505532;505533 400908;400909;400910;400911;400912;400913;400914;400915;400916;400917;400918;400919;400920 400918 11 YEDFGPLFTAK Unmodified 1286.6183 0.61830402 4153 Q9BTY2 FUCA2 Plasma alpha-L-fucosidase yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 84.316 80.318 2 0.0029566 99887 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.869 66.629 37276000 0 37276000 0 0 0 0 0 0 0 0 0 0 0 0 0 59922 4153 53896 505534;505535 400921;400922 400921 2 YEDFKEEGSENAVK Unmodified 1643.7315 0.73149588 4636 Q9NTK5 OLA1 Obg-like ATPase 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.56 3.86 3 1 5 1 2 1 1 1 1 1 1 33.071 31.026 3 0.0001221 39988 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.651 69.515 135920000 5807600 102450000 1050800 4323900 0 0 5864300 0 0 3802600 7758000 0 0 4864700 0 59923 4636 53897 505536;505537;505538;505539;505540;505541;505542;505543;505544 400923;400924;400925 400924 3 YEDGIALLR Unmodified 1048.5553 0.55530983 4944 Q9UJX3 ANAPC7 Anaphase-promoting complex subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 70.226 70.302 2 0.0031591 80521 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 92.47 58.955 237450000 0 0 0 11185000 12491000 17021000 15968000 16533000 13637000 20324000 21812000 28790000 25767000 22226000 31694000 59924 4944 53898 505545;505546;505547;505548;505549;505550;505551;505552;505553;505554;505555;505556 400926;400927;400928;400929;400930;400931;400932;400933;400934;400935;400936;400937;400938 400931 13 YEDICPSTHNMDVPNIK Unmodified 2031.903 0.90301143 1949 P63241;Q6IS14;Q9GZV4 EIF5A;EIF5AL1;EIF5A2 Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-1-like;Eukaryotic translation initiation factor 5A-2 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.21 3.75 4 1 9 1 3 1 1 1 1 1 1 1 1 1 1 66.77 64.918 2;3 3.9457E-54 83453 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 151.66 141.52 787480000 9319300 675980000 8673900 0 0 4863000 0 3158200 2799300 4600600 10625000 12033000 4138400 9525900 41764000 59925 1949 53899 505557;505558;505559;505560;505561;505562;505563;505564;505565;505566;505567;505568;505569;505570 400939;400940;400941;400942;400943;400944;400945;400946;400947;400948;400949;400950;400951;400952;400953 400941 14 YEDICPSTHNMDVPNIK Oxidation (M) 2047.8979 0.89792605 1949 P63241;Q6IS14;Q9GZV4 EIF5A;EIF5AL1;EIF5A2 Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-1-like;Eukaryotic translation initiation factor 5A-2 yes no 0 1 0 By MS/MS 2.33 0.471 2 1 3 58.366 52.855 2;3 0.00057727 67969 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.903 69.115 316400000 0 316400000 0 0 0 0 0 0 0 0 0 0 0 0 0 59926 1949 53899 505571;505572;505573 400954;400955 400955 3131 2 YEDLAPCITLK Unmodified 1321.6588 0.65878863 1243 P29144 TPP2 Tripeptidyl-peptidase 2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 78.984 74.918 2 0.0025849 93227 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.53 79.754 235020000 0 235020000 0 0 0 0 0 0 0 0 0 0 0 0 0 59927 1243 53900 505574;505575 400956;400957 400956 2 YEDMAAFMK Unmodified 1104.462 0.46200307 1312 P31947 SFN 14-3-3 protein sigma yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 66.083 66.235 2 0.0061887 75170 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.738 52.215 23865000 0 0 0 2701600 0 0 0 0 0 0 5449900 4790400 0 0 10923000 59928 1312 53901 505576;505577;505578;505579;505580 400958;400959 400958 2 YEDSDKPFVDSPASR Unmodified 1711.7689 0.76894402 602 O94913 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.813 39.992 3 0.00092087 44295 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 44.196 42.424 94735000 0 0 0 6256300 5344700 9073700 6611700 5866700 5929500 9567000 7740700 13590000 8170100 6387700 10197000 59929 602 53902 505581;505582;505583;505584;505585;505586;505587;505588;505589;505590;505591;505592 400960;400961;400962;400963;400964;400965;400966;400967;400968;400969 400961 10 YEDVVQGLQK Unmodified 1177.5979 0.59790293 399 O60437 PPL Periplakin yes yes 0 0 0 By MS/MS 10 0 1 1 49.051 48.446 2 0.0053211 55222 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 69.423 49.285 8421800 0 0 0 8421800 0 0 0 0 0 0 0 0 0 0 0 59930 399 53903 505593 400970 400970 1 YEEDYYEDDEEDDPDALK Unmodified 2251.8441 0.84407861 3946 Q96P70 IPO9 Importin-9 yes yes 0 0 0 By MS/MS 10 0 1 1 57.734 57.775 2 2.1109E-10 65819 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 85.845 85.845 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59931 3946 53904 505594 400971 400971 1 YEEEVALR Unmodified 1007.4924 0.49237523 81 CON__Q6NT21;CON__P78385;P78385;A6NCN2 KRT83;KRT87P Keratin, type II cuticular Hb3;Putative keratin-87 protein no no 0 0 0 By MS/MS 10 0 1 1 38.187 38.348 2 0.021412 43096 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 61.999 18.753 + 220970000 0 0 0 0 0 0 0 220970000 0 0 0 0 0 0 0 59932 81 53905 505595 400972 400972 1 YEEGINIHLAK Unmodified 1285.6667 0.6666512 2222 Q12996 CSTF3 Cleavage stimulation factor subunit 3 yes yes 0 0 0 By MS/MS 2 0 1 1 62.822 56.929 3 0.022378 72987 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 42.21 33.466 42517000 0 42517000 0 0 0 0 0 0 0 0 0 0 0 0 0 59933 2222 53906 505596 400973 400973 1 YEEGNEMFFK Unmodified 1292.5383 0.53833914 3454 Q8NG68 TTL Tubulin--tyrosine ligase yes yes 0 0 0 By MS/MS 2 0 1 1 69.591 63.722 2 0.0054445 81163 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.67 75.147 28501000 0 28501000 0 0 0 0 0 0 0 0 0 0 0 0 0 59934 3454 53907 505597 400974 400974 1 YEEGSLQER Unmodified 1109.4989 0.49891717 341 O43548 TGM5 Protein-glutamine gamma-glutamyltransferase 5 yes yes 0 0 0 By MS/MS 10 0 1 1 21.44 21.287 2 0.0052791 22194 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 78.149 22.473 4978100 0 0 0 4978100 0 0 0 0 0 0 0 0 0 0 0 59935 341 53908 505598 400975;400976 400976 2 YEEHVREQQAQVEK Unmodified 1771.8489 0.84892567 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.22 6 1 26 2 3 2 2 2 2 2 2 2 2 2 2 2 4 2 17.459 16.806 3;4 1.2757E-19 17036 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 127.36 112.48 3372400000 94918000 159620000 655710000 68062000 118930000 148160000 247430000 157770000 148340000 178260000 249020000 329390000 286540000 217420000 312780000 59936 2290 53909 505599;505600;505601;505602;505603;505604;505605;505606;505607;505608;505609;505610;505611;505612;505613;505614;505615;505616;505617;505618;505619;505620;505621;505622;505623;505624;505625;505626;505627;505628;505629;505630;505631 400977;400978;400979;400980;400981;400982;400983;400984;400985;400986;400987;400988;400989;400990;400991;400992;400993;400994;400995;400996;400997;400998;400999;401000;401001;401002;401003 400981 15 YEELFPAFSDSR Unmodified 1459.662 0.66195975 1750 P54920 NAPA Alpha-soluble NSF attachment protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.956 82.018 2 0.0043631 94542 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 59.426 49.054 47801000 0 0 0 2450100 1795800 4613000 2319300 3833600 2328500 4489600 4302900 4677100 2458000 2767100 11766000 59937 1750 53910 505632;505633;505634;505635;505636;505637;505638;505639;505640;505641;505642;505643 401004;401005;401006;401007;401008;401009;401010;401011;401012;401013 401006 10 YEELQITAGR Unmodified 1178.5932 0.5931519 780;779 P04264;CON__P04264;P04259 KRT1;KRT6B Keratin, type II cytoskeletal 1;Keratin, type II cytoskeletal 6B no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.94 0.712 5 622 2 2 1 57 49 52 48 44 58 57 62 59 64 52 20 86.326 86.392 2 3.4949E-42 57987 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 186.25 140.23 + 77012000000 5051700 39813000 1519500 9065800000 3545400000 5960600000 3603900000 11826000000 4612500000 6889800000 6617100000 9079800000 8585600000 4500800000 2678200000 59938 780;779 53911 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401014;401015;401016;401017;401018;401019;401020;401021;401022;401023;401024;401025;401026;401027;401028;401029;401030;401031;401032;401033;401034;401035;401036;401037;401038;401039;401040;401041;401042;401043;401044;401045;401046;401047;401048;401049;401050;401051;401052;401053;401054;401055;401056;401057;401058;401059;401060;401061;401062;401063;401064;401065;401066;401067;401068;401069;401070;401071;401072;401073;401074;401075;401076;401077;401078;401079;401080;401081;401082;401083;401084;401085;401086;401087;401088;401089;401090;401091;401092;401093;401094;401095;401096;401097;401098;401099;401100;401101;401102;401103;401104;401105;401106;401107;401108;401109;401110;401111;401112;401113;401114;401115;401116;401117;401118;401119;401120;401121;401122;401123;401124;401125;401126;401127;401128;401129;401130;401131;401132;401133;401134;401135;401136;401137;401138;401139;401140;401141;401142;401143;401144;401145;401146;401147;401148;401149;401150;401151;401152;401153;401154;401155;401156;401157;401158;401159;401160;401161;401162;401163;401164;401165;401166;401167;401168;401169;401170;401171;401172;401173;401174;401175;401176;401177;401178;401179;401180;401181;401182;401183;401184;401185;401186;401187;401188;401189;401190;401191;401192;401193;401194;401195;401196;401197;401198;401199;401200;401201;401202;401203;401204;401205;401206;401207;401208;401209;401210;401211;401212;401213;401214;401215;401216;401217;401218;401219;401220;401221;401222;401223;401224;401225;401226;401227;401228;401229;401230;401231;401232;401233;401234;401235;401236;401237;401238;401239;401240;401241;401242;401243;401244;401245;401246;401247;401248;401249;401250;401251;401252;401253;401254;401255;401256;401257;401258;401259;401260;401261;401262;401263;401264;401265;401266;401267;401268;401269;401270;401271;401272;401273;401274;401275;401276;401277;401278;401279;401280;401281;401282;401283;401284;401285;401286;401287;401288;401289;401290;401291;401292;401293;401294;401295;401296;401297;401298;401299;401300;401301;401302;401303;401304;401305;401306;401307;401308;401309;401310;401311;401312;401313;401314;401315;401316;401317;401318;401319;401320;401321;401322;401323;401324;401325;401326;401327;401328;401329;401330;401331;401332;401333;401334;401335;401336;401337;401338;401339;401340;401341;401342;401343;401344;401345;401346;401347;401348;401349;401350;401351;401352;401353;401354;401355;401356;401357;401358;401359;401360;401361;401362;401363;401364;401365;401366;401367;401368;401369;401370;401371;401372;401373;401374;401375;401376;401377;401378;401379;401380;401381;401382;401383;401384;401385;401386;401387;401388;401389;401390;401391;401392;401393;401394;401395;401396;401397;401398;401399;401400;401401;401402;401403;401404;401405;401406;401407;401408;401409;401410;401411;401412;401413;401414;401415;401416;401417;401418;401419;401420;401421;401422;401423;401424;401425;401426;401427;401428;401429;401430;401431;401432;401433;401434;401435;401436;401437;401438;401439;401440;401441;401442;401443;401444;401445;401446;401447;401448;401449;401450;401451;401452;401453;401454;401455;401456;401457;401458;401459;401460;401461;401462;401463;401464;401465;401466;401467;401468;401469;401470;401471;401472;401473;401474;401475;401476;401477;401478;401479;401480;401481;401482;401483;401484;401485;401486;401487;401488;401489;401490;401491;401492;401493;401494;401495;401496;401497;401498;401499;401500;401501;401502;401503;401504;401505;401506;401507;401508;401509;401510;401511;401512;401513;401514;401515;401516;401517;401518;401519;401520;401521;401522;401523;401524;401525;401526;401527;401528;401529;401530;401531;401532;401533;401534;401535;401536;401537;401538;401539;401540;401541;401542;401543;401544;401545;401546;401547;401548;401549;401550;401551;401552;401553;401554;401555;401556;401557;401558;401559;401560;401561;401562;401563;401564;401565;401566;401567;401568;401569;401570;401571;401572;401573;401574;401575;401576;401577;401578;401579;401580;401581;401582;401583;401584;401585;401586;401587;401588;401589;401590;401591;401592;401593;401594;401595;401596;401597;401598;401599;401600;401601;401602;401603;401604;401605;401606;401607;401608;401609;401610;401611;401612;401613;401614;401615;401616;401617;401618;401619;401620;401621;401622;401623;401624;401625;401626;401627;401628;401629;401630;401631;401632;401633;401634;401635;401636;401637;401638;401639;401640;401641;401642;401643;401644;401645;401646;401647;401648;401649;401650;401651;401652;401653;401654;401655;401656;401657;401658;401659;401660;401661;401662;401663;401664;401665;401666;401667;401668;401669;401670;401671;401672;401673;401674;401675;401676;401677;401678;401679;401680;401681;401682;401683;401684;401685;401686;401687;401688;401689;401690;401691;401692;401693;401694;401695;401696;401697;401698;401699;401700;401701;401702;401703;401704;401705;401706;401707;401708;401709;401710;401711;401712;401713;401714;401715;401716;401717;401718;401719;401720;401721;401722;401723;401724;401725;401726;401727;401728;401729;401730;401731;401732;401733;401734;401735;401736;401737;401738;401739;401740;401741;401742;401743;401744;401745;401746;401747;401748;401749;401750;401751;401752;401753;401754;401755;401756;401757;401758;401759;401760;401761;401762;401763;401764;401765;401766;401767;401768;401769;401770;401771;401772;401773;401774;401775;401776;401777;401778;401779;401780;401781;401782;401783;401784;401785;401786;401787;401788;401789;401790;401791;401792;401793;401794;401795;401796;401797;401798;401799;401800;401801;401802;401803;401804;401805;401806;401807;401808;401809;401810;401811;401812;401813;401814;401815;401816;401817;401818;401819;401820;401821;401822;401823;401824;401825;401826;401827;401828;401829;401830;401831;401832;401833;401834;401835;401836;401837;401838;401839;401840;401841;401842;401843;401844;401845;401846;401847 401238 805 YEELQITAGRHGDSVR Unmodified 1829.902 0.90202387 780 P04264;CON__P04264 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 2 1 2 2 1 2 2 2 2 42.002 42.323 3;4 7.439E-42 46628 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 144.12 138.58 + 192510000 0 0 0 0 0 16915000 3036500 11328000 24037000 8649100 0 61577000 20972000 29716000 16282000 59939 780 53912 506271;506272;506273;506274;506275;506276;506277;506278;506279;506280;506281;506282;506283;506284;506285;506286 401848;401849;401850;401851;401852;401853;401854;401855;401856;401857;401858 401857 9 YEELQQTAGR Unmodified 1193.5677 0.56766543 74 CON__P13647;P13647 KRT5 Keratin, type II cytoskeletal 5 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 16 1 1 2 2 2 1 1 1 1 2 1 1 25.002 25.189 2 2.2662E-42 26276 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 214.12 184.97 + 7208300000 0 0 0 1327700000 545770000 563480000 446450000 1169700000 329440000 572990000 461380000 358400000 721310000 470540000 241110000 59940 74 53913 506287;506288;506289;506290;506291;506292;506293;506294;506295;506296;506297;506298;506299;506300;506301;506302 401859;401860;401861;401862;401863;401864;401865;401866;401867;401868;401869;401870;401871;401872;401873;401874;401875;401876;401877;401878;401879;401880 401873 22 YEELQQTAGRHGDDLR Unmodified 1886.8871 0.88710209 74 CON__P13647;P13647 KRT5 Keratin, type II cytoskeletal 5 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 14 2 1 1 1 2 2 1 1 1 1 1 31.546 31.666 3;4 8.8799E-20 34937 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 109.35 85.161 + 181540000 0 0 0 55888000 5039400 6969600 8172600 47168000 11689000 10936000 0 19590000 1068600 7292400 7730200 59941 74 53914 506303;506304;506305;506306;506307;506308;506309;506310;506311;506312;506313;506314;506315;506316 401881;401882;401883;401884;401885;401886 401886 6 YEELQQTAGRHGDDLRNTK Unmodified 2230.0727 0.072671031 74 CON__P13647;P13647 KRT5 Keratin, type II cytoskeletal 5 no no 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS 6.8 3.92 2 3 2 1 1 1 31.287 28.784 3;4 0.0006937 40797 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.107 31.799 + 44890000 30710000 0 0 3620100 0 0 0 0 4829400 0 0 0 0 5730600 0 59942 74 53915 506317;506318;506319;506320;506321 401887;401888;401889 401888 3 YEELQSLAGK Unmodified 1136.5714 0.57135383 67;51 CON__H-INV:HIT000292931;CON__P05787;P05787 KRT8 Keratin, type II cytoskeletal 8 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.26 3.26 5 1 21 2 3 1 1 2 1 2 3 1 1 2 2 1 2 3 50.251 49.197 2 7.0446E-08 54408 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 152.47 11.964 + 13406000000 69192000 2889700000 26416000 520870000 734350000 766470000 862450000 704920000 784360000 805760000 1009900000 1377700000 977820000 749250000 1126700000 59943 51;67 53916 506322;506323;506324;506325;506326;506327;506328;506329;506330;506331;506332;506333;506334;506335;506336;506337;506338;506339;506340;506341;506342;506343;506344;506345;506346;506347;506348 401890;401891;401892;401893;401894;401895;401896;401897;401898;401899;401900;401901;401902;401903;401904;401905;401906;401907;401908;401909;401910;401911;401912;401913;401914;401915;401916;401917;401918;401919;401920;401921 401902 32 YEELQVTAGK Unmodified 1136.5714 0.57135383 96 CON__Q5XKE5;Q5XKE5 KRT79 Keratin, type II cytoskeletal 79 no no 0 0 0 By MS/MS By matching 10 0 3 2 1 44.12 43.58 2 0.00046371 45277 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 135.79 9.3791 + 59320000 0 0 0 55763000 3557700 0 0 0 0 0 0 0 0 0 0 59944 96 53917 506349;506350;506351 401922;401923;401924 401922 3 YEELQVTAGR Unmodified 1164.5775 0.57750184 66;58;80;53;105 CON__P50446;CON__Q8BGZ7;CON__O95678;O95678;CON__P02538;P02538;CON__P04259 KRT75;KRT6A Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 6A no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 14 1 1 1 1 1 1 1 1 1 3 1 1 42.553 42.742 2 6.638E-32 48019 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 180.8 131.7 + 2213900000 0 0 0 378330000 67108000 63219000 125310000 199910000 52608000 140860000 102830000 138870000 838210000 66001000 40620000 59945 80;105;53;58;66 53918 506352;506353;506354;506355;506356;506357;506358;506359;506360;506361;506362;506363;506364;506365 401925;401926;401927;401928;401929;401930;401931;401932;401933;401934;401935;401936;401937;401938;401939;401940;401941;401942;401943;401944;401945;401946;401947;401948 401939 23 YEELQVTVGR Unmodified 1192.6088 0.60880197 79 CON__P35908v2;P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.76 1.37 2 64 1 1 7 8 6 5 5 7 4 4 4 8 3 3 63.924 64.013 2 3.3907E-54 64043 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 192.14 145.07 + 1434200000 674410 253610 0 76681000 55568000 107170000 58722000 78861000 374090000 124070000 133440000 175500000 122930000 66986000 59232000 59946 79 53919 506366;506367;506368;506369;506370;506371;506372;506373;506374;506375;506376;506377;506378;506379;506380;506381;506382;506383;506384;506385;506386;506387;506388;506389;506390;506391;506392;506393;506394;506395;506396;506397;506398;506399;506400;506401;506402;506403;506404;506405;506406;506407;506408;506409;506410;506411;506412;506413;506414;506415;506416;506417;506418;506419;506420;506421;506422;506423;506424;506425;506426;506427;506428;506429;506430;506431 401949;401950;401951;401952;401953;401954;401955;401956;401957;401958;401959;401960;401961;401962;401963;401964;401965;401966;401967;401968;401969;401970;401971;401972;401973;401974;401975;401976;401977;401978;401979;401980;401981;401982;401983;401984;401985;401986;401987;401988;401989;401990;401991;401992;401993;401994;401995;401996;401997;401998;401999;402000;402001;402002;402003;402004;402005;402006;402007;402008;402009;402010;402011;402012;402013;402014;402015;402016;402017;402018;402019;402020;402021;402022 401957 70 YEELQVTVGRHGDSLK Unmodified 1829.9272 0.92717599 79 CON__P35908v2;P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 0 1 By MS/MS 2 0 2 2 59.8 51.574 3;4 0.00023705 69873 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.413 55.241 + 45745000 45745000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59947 79 53920 506432;506433 402023;402024 402023 2 YEEVEYYYQR Unmodified 1440.6198 0.61976058 2143 Q07866 KLC1 Kinesin light chain 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 52.198 52.488 2 0.00050052 58301 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 150.28 129.38 66953000 0 0 0 0 0 9082600 3643900 4678100 4664600 7534100 8844400 7986300 3704400 5910700 10904000 59948 2143 53921 506434;506435;506436;506437;506438;506439;506440;506441;506442;506443 402025;402026;402027;402028;402029;402030;402031;402032;402033;402034;402035 402028 11 YEEYDNAIITMMNHPTDAWK Unmodified 2441.0668 0.066782296 2040 Q00610 CLTC Clathrin heavy chain 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 91.798 86.503 3 0.0024214 110271 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 38.377 35.138 7807000 6560000 0 1247000 0 0 0 0 0 0 0 0 0 0 0 0 59949 2040 53922 506444;506445 402036;402037 402036 2 YEFDIEFDIPITYPTTAPEIAVPELDGK Unmodified 3182.5587 0.55873004 5159 Q9Y3C8 UFC1 Ubiquitin-fold modifier-conjugating enzyme 1 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 99.432 94.747 3 0.00022205 118009 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 35.923 33.61 24069000 22299000 0 1770300 0 0 0 0 0 0 0 0 0 0 0 0 59950 5159 53923 506446;506447;506448 402038;402039;402040 402039 3 YEFFPEATRSEEDLK Unmodified 1859.8578 0.85775902 2955 Q6PIJ6 FBXO38 F-box only protein 38 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 78.767 72.334 3 0.01532 93245 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.482 33.083 25517000 9900700 15617000 0 0 0 0 0 0 0 0 0 0 0 0 0 59951 2955 53924 506449;506450 402041;402042 402042 0 YEGASAEVGK Unmodified 1009.4716 0.47163978 4264 Q9BZF9 UACA Uveal autoantigen with coiled-coil domains and ankyrin repeats yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 15.765 15.517 2 0.0037645 18564 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.838 63.689 54186000 0 13803000 0 3045800 2530100 2932600 3163400 0 3032400 5076400 9307700 0 6177600 5117100 0 59952 4264 53925 506451;506452;506453;506454;506455;506456;506457;506458;506459;506460;506461;506462 402043;402044;402045;402046;402047;402048;402049;402050;402051 402045 9 YEGSGEDGGAAAQSLYIANHAY Unmodified 2242.9767 0.97670496 897 P09972 ALDOC Fructose-bisphosphate aldolase C yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 76.764 72.598 2 7.8074E-102 90498 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 222.16 218.59 174180000 0 174180000 0 0 0 0 0 0 0 0 0 0 0 0 0 59953 897 53926 506463;506464 402052 402052 1 YEHDDIVSTVSVLSSGTQAVSGSK Unmodified 2465.1922 0.19217704 4092 Q9BQA1 WDR77 Methylosome protein 50 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.23 3.24 2 1 10 2 1 1 1 1 1 1 1 1 1 1 1 80.664 79.931 3 2.829E-82 98998 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 144.5 138.8 802830000 0 679690000 46086000 0 2203100 4796700 0 3738900 4380100 7042300 8595800 10734000 4022900 4509900 27035000 59954 4092 53927 506465;506466;506467;506468;506469;506470;506471;506472;506473;506474;506475;506476;506477 402053;402054;402055;402056;402057;402058;402059;402060;402061;402062;402063;402064 402056 11 YEHELALR Unmodified 1029.5243 0.52434406 70 CON__P08779;P08779 KRT16 Keratin, type I cytoskeletal 16 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.951 33.136 2 7.7054E-05 35358 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 156.4 119.24 + 728590000 0 0 0 103860000 22040000 18659000 24329000 100650000 19849000 52720000 24254000 30019000 298480000 17169000 16568000 59955 70 53928 506478;506479;506480;506481;506482;506483;506484;506485;506486;506487;506488;506489 402065;402066;402067;402068;402069;402070;402071;402072;402073;402074;402075;402076;402077 402073 10 YEIEETETVTK Unmodified 1340.6347 0.63474195 2117 Q05682 CALD1 Caldesmon yes yes 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 42.79 43.249 2 0.0068717 48444 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 55.461 45.665 27684000 0 0 0 0 0 0 0 3966400 0 0 9839300 13878000 0 0 0 59956 2117 53929 506490;506491;506492 402078 402078 1 YEILQSVDDAAIVIK Unmodified 1675.9033 0.90325265 2207 Q12906 ILF3 Interleukin enhancer-binding factor 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 91.518 86.84 2 0.00027808 106068 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 115.18 102.56 56657000 23840000 28830000 3986700 0 0 0 0 0 0 0 0 0 0 0 0 59957 2207 53930 506493;506494;506495;506496 402079;402080;402081;402082 402082 4 YEILTPNSIPK Unmodified 1273.6918 0.69180331 1356 P35579 MYH9 Myosin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.941 73.004 2 0.00056839 84329 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 94.692 78.359 1573500000 0 0 0 88110000 109450000 142540000 104360000 109740000 93548000 163620000 174350000 186640000 131900000 118150000 151100000 59958 1356 53931 506497;506498;506499;506500;506501;506502;506503;506504;506505;506506;506507;506508 402083;402084;402085;402086;402087;402088;402089;402090;402091;402092;402093;402094;402095 402091 12 YEIMDGAPVK Unmodified 1121.5427 0.54269624 498 O75436 VPS26A Vacuolar protein sorting-associated protein 26A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55.838 54.943 2 0.0033461 62064 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.827 65.416 1040300000 26075000 900430000 0 4924500 4877100 4186100 4264500 5362800 3466000 5838300 14444000 13354000 6617200 10854000 35592000 59959 498 53932 506509;506510;506511;506512;506513;506514;506515;506516;506517;506518;506519;506520;506521;506522 402096;402097;402098;402099;402100;402101;402102;402103;402104;402105;402106;402107;402108;402109 402107 14 YEIMDGAPVK Oxidation (M) 1137.5376 0.53761086 498 O75436 VPS26A Vacuolar protein sorting-associated protein 26A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 6.21 3.8 4 3 7 1 5 1 1 1 1 1 1 2 42.277 39.388 2 0.0072278 44710 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 55.064 43.423 397540000 585430 372750000 0 0 0 2015400 0 0 0 0 9148300 0 0 4209700 8836800 59960 498 53932 506523;506524;506525;506526;506527;506528;506529;506530;506531;506532;506533;506534;506535;506536 402110;402111;402112;402113;402114;402115;402116;402117;402118;402119;402120;402121 402118 650 11 YEISSVPTFLFFK Unmodified 1576.8177 0.81773211 570 O76003 GLRX3 Glutaredoxin-3 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 98.342 94.358 2 1.3909E-05 112620 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.685 63.57 20406000 13727000 0 0 0 0 0 0 0 0 0 0 0 0 0 6678900 59961 570 53933 506537;506538 402122;402123 402122 2 YEITEQR Unmodified 937.45051 0.45051041 2083 Q02878 RPL6 60S ribosomal protein L6 yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 23.722 23.976 2 0.031632 25042 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 73.637 23.598 83522000 0 0 0 4155600 0 4043200 3721200 3437500 3862900 8481600 5340800 12440000 14354000 10819000 12866000 59962 2083 53934 506539;506540;506541;506542;506543;506544;506545;506546;506547;506548;506549 402124 402124 1 YEITEQRK Unmodified 1065.5455 0.54547343 2083 Q02878 RPL6 60S ribosomal protein L6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 15.31 15.277 2 0.0016444 14039 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 153.73 97.716 244490000 0 0 16966000 7080200 6590200 7481400 10033000 8905100 7224600 15563000 38723000 28616000 36734000 30273000 30302000 59963 2083 53935 506550;506551;506552;506553;506554;506555;506556;506557;506558;506559;506560;506561;506562 402125;402126;402127;402128;402129 402126 4 YELAHPPEEWK Unmodified 1397.6616 0.66156582 2114 Q05397 PTK2 Focal adhesion kinase 1 yes yes 0 0 0 By MS/MS 2 0 1 1 64.234 58.326 3 0.0014197 74748 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.201 55.826 15169000 0 15169000 0 0 0 0 0 0 0 0 0 0 0 0 0 59964 2114 53936 506563 402130 402130 1 YELGRPAANTK Unmodified 1218.6357 0.63568542 1877 P62241 RPS8 40S ribosomal protein S8 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 2 24 1 1 2 2 2 2 2 2 2 2 2 2 2 2 25.199 25.047 2;3 3.2168E-16 26376 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 172.27 136.83 2206900000 14865000 0 1520200 104820000 157610000 138460000 130790000 124720000 135250000 155110000 176010000 232700000 214550000 239390000 381080000 59965 1877 53937 506564;506565;506566;506567;506568;506569;506570;506571;506572;506573;506574;506575;506576;506577;506578;506579;506580;506581;506582;506583;506584;506585;506586;506587;506588;506589 402131;402132;402133;402134;402135;402136;402137;402138;402139;402140;402141;402142;402143;402144;402145;402146;402147;402148;402149;402150;402151;402152;402153;402154;402155;402156 402147 19 YELISETGGSHDK Unmodified 1434.6627 0.66268803 2207;3991 Q12906;Q96SI9 ILF3;STRBP Interleukin enhancer-binding factor 3;Spermatid perinuclear RNA-binding protein no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.76 3 1 23 1 2 1 2 2 2 2 1 2 2 2 2 2 2 2 36.342 35.756 2;3 9.3878E-12 40085 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 122.51 103.73 1195400000 34430000 255960000 22889000 58418000 35983000 71301000 46372000 39617000 37276000 70630000 62788000 82493000 108400000 80743000 188130000 59966 2207;3991 53938 506590;506591;506592;506593;506594;506595;506596;506597;506598;506599;506600;506601;506602;506603;506604;506605;506606;506607;506608;506609;506610;506611;506612;506613;506614;506615;506616 402157;402158;402159;402160;402161;402162;402163;402164;402165;402166;402167;402168;402169;402170;402171;402172;402173;402174;402175;402176;402177;402178;402179;402180;402181;402182;402183 402181 20 YELLNAGYK Unmodified 1069.5444 0.5444108 217 O14802 POLR3A DNA-directed RNA polymerase III subunit RPC1 yes yes 0 0 0 By MS/MS 2 0 1 1 62.61 56.717 2 0.047219 72838 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.854 58.912 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59967 217 53939 506617 402184 402184 1 YELLTQMK Oxidation (M) 1040.5212 0.52123251 3434 Q8NEZ2 VPS37A Vacuolar protein sorting-associated protein 37A yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 43.334 43.327 2 0.028266 48100 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 49.442 14.51 34238000 0 0 0 2866900 3311200 6548000 6274100 3473300 0 0 6917800 0 0 4847000 0 59968 3434 53940 506618;506619;506620;506621;506622;506623;506624 402185;402186 402186 2 YELLTQMK Unmodified 1024.5263 0.52631789 3434 Q8NEZ2 VPS37A Vacuolar protein sorting-associated protein 37A yes yes 0 0 0 By MS/MS 2 0 1 1 67.214 61.298 2 0.031271 78293 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.189 20.984 47147000 0 47147000 0 0 0 0 0 0 0 0 0 0 0 0 0 59969 3434 53940 506625 402187 402187 1 YELPDENENLK Unmodified 1362.6303 0.63032527 2674 Q3MJ16 PLA2G4E Cytosolic phospholipase A2 epsilon yes yes 0 0 0 By MS/MS 10 0 1 1 53.796 53.147 2 0.016481 60933 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 44.318 28.115 7400700 0 0 0 7400700 0 0 0 0 0 0 0 0 0 0 0 59970 2674 53941 506626 402188 402188 1 YELQLANPK Unmodified 1074.571 0.5709599 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55.017 53.932 2 0.0034201 61333 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 104.37 88.734 630750000 16609000 317330000 5509900 16093000 17138000 22100000 21056000 18453000 18511000 26203000 26566000 29977000 25760000 29257000 40190000 59971 2930 53942 506627;506628;506629;506630;506631;506632;506633;506634;506635;506636;506637;506638;506639;506640;506641 402189;402190;402191;402192;402193;402194;402195;402196;402197;402198;402199;402200;402201;402202;402203;402204;402205;402206;402207;402208;402209;402210;402211;402212;402213 402203 25 YELQQLEGSSDR Unmodified 1423.6579 0.657937 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.56 52.703 2 4.782E-06 59302 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 110.84 83.096 228250000 0 0 0 7232800 9833000 18028000 11820000 10981000 9771400 21412000 20569000 37856000 24160000 16130000 40456000 59972 3676 53943 506642;506643;506644;506645;506646;506647;506648;506649;506650;506651;506652;506653 402214;402215;402216;402217;402218;402219;402220;402221;402222;402223;402224;402225 402219 12 YELQQLEGSSDRILELDQELIK Unmodified 2618.3439 0.34392666 3676 Q92878 RAD50 DNA repair protein RAD50 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 3 1 96.158 91.463 3 1.548E-20 114400 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 88 81.713 128440000 56220000 71175000 1041000 0 0 0 0 0 0 0 0 0 0 0 0 59973 3676 53944 506654;506655;506656;506657;506658 402226;402227;402228;402229 402229 4 YEMFAQTLQQSR Oxidation (M) 1516.698 0.69802768 1755 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 1 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 1 1 1 2 2 2 2 1 2 2 52.038 52.315 2 9.4125E-16 58314 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 157.75 139.43 199990000 0 0 0 4123700 0 6110300 3741400 3722300 5533600 14387000 36070000 32658000 9736400 25795000 58116000 59974 1755 53945 506659;506660;506661;506662;506663;506664;506665;506666;506667;506668;506669;506670;506671;506672;506673;506674;506675 402230;402231;402232;402233;402234;402235;402236;402237;402238;402239;402240;402241;402242;402243 402234 2874 14 YEMFAQTLQQSR Unmodified 1500.7031 0.70311306 1755 P55072 VCP Transitional endoplasmic reticulum ATPase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.936 67.018 2 2.6492E-08 76577 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 132.78 107.94 200970000 0 0 0 5049400 4251300 10000000 4685300 8001000 5069100 10894000 24402000 23279000 7943900 19159000 78240000 59975 1755 53945 506676;506677;506678;506679;506680;506681;506682;506683;506684;506685;506686;506687 402244;402245;402246;402247;402248;402249;402250;402251;402252;402253;402254;402255;402256 402254 13 YEMLCRGEGIK Unmodified 1354.6373 0.63734168 983 P13674 P4HA1 Prolyl 4-hydroxylase subunit alpha-1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 48.126 42.25 3 0.0049948 58481 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.471 34.812 43800000 36301000 0 7499000 0 0 0 0 0 0 0 0 0 0 0 0 59976 983 53946 506688;506689 402257 402257 1 YENDPELEK Unmodified 1135.5033 0.50333384 4177 Q9BV57 ADI1 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase yes yes 0 0 0 By MS/MS 10 0 1 1 23.199 23.86 2 0.0091747 24177 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 67.494 50.254 3633900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3633900 59977 4177 53947 506690 402258 402258 1 YENEHSFKK Unmodified 1180.5513 0.55128709 106 Q9C075;CON__Q9C075 KRT23 Keratin, type I cytoskeletal 23 yes no 0 0 1 By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.2595 7.3853 3 0.0039242 5488 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 52.725 38.046 + 108450000 0 0 0 22272000 3178900 3608800 4082900 15088000 4367300 9506600 18214000 12886000 9306500 3415500 2519000 59978 106 53948 506691;506692;506693;506694;506695;506696;506697;506698;506699;506700;506701;506702 402259 402259 1 YENELALR Unmodified 1006.5084 0.50835964 73;981;76 CON__P13646-1;CON__P19012;P19012;P13646;CON__ENSEMBL:ENSP00000377550 KRT15;KRT13 Keratin, type I cytoskeletal 15;Keratin, type I cytoskeletal 13 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 44.079 44.181 2 0.00011833 49730 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 155.51 74.129 + 1544300000 0 0 0 104710000 20245000 0 426690000 688580000 0 0 15556000 137560000 150970000 0 0 59979 73;76;981 53949 506703;506704;506705;506706;506707;506708;506709 402260;402261;402262;402263;402264;402265;402266;402267;402268;402269 402261 10 YENEVALR Unmodified 992.49271 0.49270958 72 CON__P13645;P13645 KRT10 Keratin, type I cytoskeletal 10 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.9 2.69 4 2 36 2 3 1 4 5 4 2 2 3 5 3 2 3 2 1 35.326 35.039 2 1.2794E-07 37174 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 162.5 114.66 + 82877000000 1923500 30212000 607340 14151000000 4768700000 5671200000 4924200000 10413000000 3645000000 7784700000 6871100000 9387500000 7761900000 3982600000 3483400000 59980 72 53950 506710;506711;506712;506713;506714;506715;506716;506717;506718;506719;506720;506721;506722;506723;506724;506725;506726;506727;506728;506729;506730;506731;506732;506733;506734;506735;506736;506737;506738;506739;506740;506741;506742;506743;506744;506745;506746;506747;506748;506749;506750;506751 402270;402271;402272;402273;402274;402275;402276;402277;402278;402279;402280;402281;402282;402283;402284;402285;402286;402287;402288;402289;402290;402291;402292;402293;402294;402295;402296;402297;402298;402299;402300;402301;402302;402303;402304;402305;402306;402307;402308;402309;402310;402311;402312;402313;402314;402315;402316;402317;402318;402319;402320;402321;402322;402323;402324;402325;402326;402327;402328;402329;402330;402331;402332 402274 62 YENFEDPMGTIDK Unmodified 1557.6657 0.6657245 3009 Q6ZS30 NBEAL1 Neurobeachin-like protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 75.291 70.351 2 0.0040786 88178 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.266 72.24 36049000 0 36049000 0 0 0 0 0 0 0 0 0 0 0 0 0 59981 3009 53951 506752 402333 402333 1 YENGAFQER Unmodified 1112.4887 0.48868683 1170 P23919 DTYMK Thymidylate kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.168 24.372 2 0.0089221 25671 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 68.224 53.688 168330000 0 0 0 13919000 8907000 15145000 13667000 12615000 10238000 15762000 13126000 14034000 13443000 9883900 27592000 59982 1170 53952 506753;506754;506755;506756;506757;506758;506759;506760;506761;506762;506763;506764 402334;402335;402336;402337;402338;402339;402340;402341 402335 7 YENNVMNIR Unmodified 1151.5393 0.53934219 2151 Q08209;P16298;P48454 PPP3CA;PPP3CB;PPP3CC Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform;Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform;Serine/threonine-protein phosphatase 2B catalytic subunit gamma isoform yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 45.434 45.646 2 0.0035959 51041 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 89.55 77.781 40295000 0 0 0 0 2841300 0 0 4688700 0 0 16694000 16071000 0 0 0 59983 2151 53953 506765;506766;506767;506768;506769;506770 402342;402343;402344;402345;402346;402347 402345 6 YENVDLLCK Unmodified 1152.5485 0.5485099 4630 Q9NSV4 DIAPH3 Protein diaphanous homolog 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 56.242 55.59 2 0.0083723 62827 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 69.812 34.456 83677000 0 55459000 0 0 3341000 0 3319600 3146200 3911300 3213300 6263600 0 0 5022900 0 59984 4630 53954 506771;506772;506773;506774;506775;506776;506777;506778;506779;506780 402348;402349;402350;402351;402352;402353;402354 402351 7 YEPAAVSEQGDK Unmodified 1292.5885 0.58846046 792 P05023 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 23.669 24.341 2 0.0061623 25292 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 51.927 39.88 6082800 0 0 0 0 0 0 0 0 0 0 0 6082800 0 0 0 59985 792 53955 506781;506782 402355;402356 402356 2 YEPAAVSEQGDKK Unmodified 1420.6834 0.68342347 792 P05023 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.75 2.8 1 1 10 2 1 1 1 1 1 1 1 1 1 1 18.629 18.152 3 0.0046923 17886 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 27.458 19.914 78597000 0 34193000 0 3482800 4511600 1731600 3382400 0 1756100 4723300 6059600 7705400 5271000 0 5780400 59986 792 53956 506783;506784;506785;506786;506787;506788;506789;506790;506791;506792;506793;506794 402357;402358;402359;402360 402360 4 YEPEETVEVPVLK Unmodified 1530.7817 0.78174053 3806 Q96EA4 SPDL1 Protein Spindly yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 76.794 76.633 2 0.0065078 88530 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 54.776 41.684 14972000 0 0 0 1964300 2394400 0 0 0 0 6116000 0 0 4497400 0 0 59987 3806 53957 506795;506796;506797;506798;506799;506800 402361;402362;402363;402364 402361 4 YEPNPHYHENAVIQK Unmodified 1837.8747 0.87474649 4301 Q9GZR1 SENP6 Sentrin-specific protease 6 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By matching By matching By matching By MS/MS By matching By matching 8.4 3.2 2 8 1 1 1 1 1 1 1 1 1 1 33.535 32.688 3;4 0.0099561 45995 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 25.609 17.059 50057000 18835000 0 3675800 0 1526800 3570900 0 4706300 1448800 2710500 4158600 0 4278600 0 5145400 59988 4301 53958 506801;506802;506803;506804;506805;506806;506807;506808;506809;506810 402365;402366 402366 2 YEPRSHMMDVQGSTQDSAIK Unmodified 2279.0311 0.031065492 982 P13667 PDIA4 Protein disulfide-isomerase A4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 5 2 1 2 49.397 43.519 3;4 8.9106E-72 57560 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.53 109.68 401220000 373710000 17850000 9663400 0 0 0 0 0 0 0 0 0 0 0 0 59989 982 53959 506811;506812;506813;506814;506815 402367;402368;402369;402370;402371;402372;402373 402368 5 YEPRSHMMDVQGSTQDSAIK 2 Oxidation (M) 2311.0209 0.020894736 982 P13667 PDIA4 Protein disulfide-isomerase A4 yes yes 0 2 1 By MS/MS By MS/MS By MS/MS 2 0 5 2 1 2 28.262 23.922 3;4 3.5926E-28 30504 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 114.88 109.3 325690000 254430000 5008400 66244000 0 0 0 0 0 0 0 0 0 0 0 0 59990 982 53959 506816;506817;506818;506819;506820 402374;402375;402376 402375 1323;1324 2 YEPRSHMMDVQGSTQDSAIK Oxidation (M) 2295.026 0.025980114 982 P13667 PDIA4 Protein disulfide-isomerase A4 yes yes 0 1 1 By MS/MS By MS/MS 2 0 6 3 3 38.532 33.505 3;4 4.1494E-10 46198 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.968 90.968 471370000 438760000 0 32613000 0 0 0 0 0 0 0 0 0 0 0 0 59991 982 53959 506821;506822;506823;506824;506825;506826 402377;402378;402379;402380;402381;402382 402378 1323;1324 5 YEQGFFPK Unmodified 1014.4811 0.48108226 3017 Q6ZUT9 DENND5B DENN domain-containing protein 5B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 53.482 53.533 2 0.0090204 60934 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 84.244 64.607 77544000 0 0 0 0 10480000 0 11687000 12517000 11030000 17936000 0 0 13893000 0 0 59992 3017 53960 506827;506828;506829;506830;506831;506832 402383;402384;402385;402386;402387;402388;402389;402390;402391 402387 9 YEQGFITDPVVLSPK Unmodified 1691.877 0.8770379 964 P12268 IMPDH2 Inosine-5'-monophosphate dehydrogenase 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83.498 82.558 2 1.3527E-09 95265 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.858 79.281 87142000 14664000 11307000 8217700 1016700 1403000 3777100 2331800 3867600 2998700 5047600 6455200 6618200 2987100 0 16450000 59993 964 53961 506833;506834;506835;506836;506837;506838;506839;506840;506841;506842;506843;506844;506845;506846 402392;402393;402394;402395;402396;402397;402398;402399;402400;402401;402402 402395 11 YEQGTGCWQGPNR Unmodified 1551.6525 0.65247447 996 P14314 PRKCSH Glucosidase 2 subunit beta yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 35.174 35.448 2 1.0311E-89 38000 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 198.25 192.4 130320000 0 0 0 0 2166200 0 4481700 0 5690100 6229200 18138000 15226000 9524700 18379000 50482000 59994 996 53962 506847;506848;506849;506850;506851;506852;506853;506854;506855 402403;402404;402405;402406;402407;402408 402403 6 YERELMLHAADVEALQAAK Oxidation (M) 2173.0838 0.08375299 965 P12270 TPR Nucleoprotein TPR yes yes 0 1 1 By MS/MS By MS/MS 2.67 0.471 1 2 2 1 74.235 68.758 4 5.0245E-05 89564 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 67.995 57.38 19477000 15302000 4174900 0 0 0 0 0 0 0 0 0 0 0 0 0 59995 965 53963 506856;506857;506858 402409;402410 402410 1263 2 YERELMLHAADVEALQAAK Unmodified 2157.0888 0.088838367 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 1 By MS/MS By MS/MS 2.5 0.5 1 1 1 1 79.347 73.572 4 5.5812E-05 89507 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 69.979 60.321 23702000 17756000 5946200 0 0 0 0 0 0 0 0 0 0 0 0 0 59996 965 53963 506859;506860 402411;402412 402411 2 YEREQYADR Unmodified 1228.5473 0.54726434 4209 Q9BWF3 RBM4 RNA-binding protein 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 10.253 10.39 3 0.004622 7027 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 66.435 27.413 147740000 0 0 0 6750900 7143500 7444000 10521000 9955300 6783000 12023000 14982000 18122000 14885000 13637000 25498000 59997 4209 53964 506861;506862;506863;506864;506865;506866;506867;506868;506869;506870;506871;506872 402413;402414;402415;402416;402417;402418 402415 5 YESELQMPDIMR Oxidation (M) 1526.6745 0.67451505 2448 Q147X3 NAA30 N-alpha-acetyltransferase 30 yes yes 0 1 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 71.489 71.432 2 9.0108E-05 82170 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 86.624 82.47 41984000 0 0 0 972090 1887800 2336500 0 0 0 8587300 9632200 18569000 0 0 0 59998 2448 53965 506873;506874;506875;506876;506877;506878 402419;402420;402421 402419 4015 3 YESELQMPDIMR Unmodified 1510.6796 0.67960042 2448 Q147X3 NAA30 N-alpha-acetyltransferase 30 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 80.43 80.474 2 4.8295E-08 93153 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 121.83 115.45 24369000 0 0 0 0 792620 0 0 0 0 6599900 5334200 11643000 0 0 0 59999 2448 53965 506879;506880;506881;506882 402422;402423;402424 402424 3 YESLELCRPVLQQGR Unmodified 1846.936 0.93596654 2040 Q00610 CLTC Clathrin heavy chain 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.859 65.943 3 5.7537E-19 74781 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.37 95.086 118710000 0 0 0 2417000 1647500 11126000 3680800 4752200 4862400 7134500 9732300 20458000 8620400 14890000 29384000 60000 2040 53966 506883;506884;506885;506886;506887;506888;506889;506890;506891;506892;506893;506894 402425;402426;402427;402428;402429;402430;402431;402432;402433;402434;402435;402436 402428 12 YESLELCRPVLQQGRK Unmodified 1975.0309 0.030929558 2040 Q00610 CLTC Clathrin heavy chain 1 yes yes 0 0 2 By MS/MS 10 0 1 1 56.572 57.184 3 0.012228 64305 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.03 28.228 20906000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20906000 60001 2040 53967 506895 402437 402437 1 YESLTDPSK Unmodified 1038.487 0.4869555 862;850;2716;2715 P07900;P08238;Q58FF7;Q58FF6;Q58FF8 HSP90AA1;HSP90AB1;HSP90AB3P;HSP90AB4P;HSP90AB2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 4;Putative heat shock protein HSP 90-beta 2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27.182 27.03 2 0.0032704 28690 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 90.601 79.19 629550000 0 10428000 0 27654000 22541000 48753000 30579000 24394000 16231000 57365000 90770000 84306000 54385000 51652000 110490000 60002 850;862;2715;2716 53968 506896;506897;506898;506899;506900;506901;506902;506903;506904;506905;506906;506907;506908;506909 402438;402439;402440;402441;402442;402443;402444;402445;402446;402447;402448;402449;402450;402451;402452;402453 402445 15 YESLVEK Unmodified 866.43855 0.43854874 1223 P27707 DCK Deoxycytidine kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 25.371 25.724 2 0.040011 26597 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.787 29.765 1025300000 0 0 0 89079000 0 0 0 0 0 71297000 179780000 200440000 0 139120000 345540000 60003 1223 53969 506910;506911;506912;506913;506914;506915 402454 402454 1 YESQEPLAGQESPLPLATR Unmodified 2085.0378 0.037848654 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 76.863 76.923 2;3 6.2382E-47 88338 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 163.99 146.33 234090000 0 0 0 11957000 12014000 14318000 18954000 15013000 13353000 18237000 23227000 26430000 15920000 24852000 39817000 60004 4285 53970 506916;506917;506918;506919;506920;506921;506922;506923;506924;506925;506926;506927;506928;506929;506930;506931;506932;506933;506934;506935;506936;506937;506938;506939 402455;402456;402457;402458;402459;402460;402461;402462;402463;402464;402465;402466 402458 12 YESQTSFGSMYPTR Oxidation (M) 1668.709 0.7089863 4797 Q9P0U4 CXXC1 CXXC-type zinc finger protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 45.441 45.601 2 7.1018E-06 51310 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 89.548 83.767 36349000 0 0 0 0 4394800 0 4024100 4673900 2918000 4788700 0 9721300 5828500 0 0 60005 4797 53971 506940;506941;506942;506943;506944;506945;506946;506947;506948 402467;402468;402469;402470;402471;402472;402473;402474;402475 402468 6155 9 YESQTSFGSMYPTR Unmodified 1652.7141 0.71407167 4797 Q9P0U4 CXXC1 CXXC-type zinc finger protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 59.158 59.55 2 6.8162E-08 67252 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 112.15 102.19 15273000 0 0 0 0 0 0 0 0 0 0 0 0 0 4308400 10964000 60006 4797 53971 506949;506950;506951;506952 402476;402477;402478;402479;402480 402478 5 YESSALPSGQLTSLSEYASR Unmodified 2145.0226 0.022592521 2210 Q12931 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 1 2 2 2 1 2 2 2 2 2 2 80.407 80.5 2;3 2.8181E-62 93440 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 137.8 127.47 182350000 0 0 0 2038300 3265000 16955000 9846400 14320000 5703000 24485000 20525000 24405000 11822000 14493000 34495000 60007 2210 53972 506953;506954;506955;506956;506957;506958;506959;506960;506961;506962;506963;506964;506965;506966;506967;506968;506969;506970;506971;506972;506973 402481;402482;402483;402484;402485;402486;402487;402488;402489;402490;402491;402492;402493;402494;402495 402492 11 YESSSYTDQFSR Unmodified 1468.6107 0.61065246 2136 Q07157 TJP1 Tight junction protein ZO-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 42.656 42.633 2 3.1433E-08 47567 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 129.16 121.23 42906000 0 0 0 6103400 4182200 6397100 4185300 3569800 4297900 9017100 0 0 0 5153800 0 60008 2136 53973 506974;506975;506976;506977;506978;506979;506980;506981;506982;506983 402496;402497;402498;402499;402500;402501;402502;402503;402504;402505 402499 10 YESSTASALVA Unmodified 1097.5241 0.52406928 1887 P62277 RPS13 40S ribosomal protein S13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.31 2.4 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 54.746 55.293 2 0.005167 89011 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 75.854 65.387 646580000 85636000 0 0 30517000 38655000 40742000 35615000 42686000 35352000 60425000 50849000 66230000 56067000 39497000 64307000 60009 1887 53974 506984;506985;506986;506987;506988;506989;506990;506991;506992;506993;506994;506995;506996 402506;402507;402508;402509 402508 4 YESVLQLGR Unmodified 1063.5662 0.56620887 1711 P53365 ARFIP2 Arfaptin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 62.395 62.631 2 0.040497 71504 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 44.377 21.306 45703000 0 0 0 0 0 6728000 0 6868900 0 0 10062000 15083000 0 6961400 0 60010 1711 53975 506997;506998;506999;507000;507001 402510 402510 1 YESYVQTGCTSLK Unmodified 1534.6974 0.69735898 4181 Q9BVA0 KATNB1 Katanin p80 WD40 repeat-containing subunit B1 yes yes 0 0 0 By MS/MS 2 0 1 1 51.095 45.349 2 6.0937E-21 58916 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.25 124.31 13283000 0 13283000 0 0 0 0 0 0 0 0 0 0 0 0 0 60011 4181 53976 507002 402511 402511 1 YETEEGVNK Unmodified 1067.4771 0.47711909 4046 Q99698 LYST Lysosomal-trafficking regulator yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 29.08 29.005 2 0.019227 31195 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 54.157 17.762 18532000 0 0 0 0 6731900 0 6046900 0 5752700 0 0 0 0 0 0 60012 4046 53977 507003;507004;507005 402512 402512 1 YETEINITK Unmodified 1109.5605 0.56045479 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.093 46.261 2 0.0083723 52010 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 69.812 47.32 363550000 0 0 0 66456000 20247000 26640000 21095000 47082000 17824000 25467000 27363000 33407000 34431000 15860000 27682000 60013 1029 53978 507006;507007;507008;507009;507010;507011;507012;507013;507014;507015;507016;507017 402513;402514;402515;402516;402517;402518;402519;402520;402521;402522;402523;402524;402525;402526 402519 14 YETELAMR Oxidation (M) 1027.4644 0.46444592 814 P05783 KRT18 Keratin, type I cytoskeletal 18 no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 27.105 27.303 2 0.0041809 28026 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 101.64 62.807 3001700000 0 0 0 178280000 240380000 283110000 263020000 236470000 220790000 264840000 266910000 356560000 268920000 194460000 227940000 60014 814 53979 507018;507019;507020;507021;507022;507023;507024;507025;507026;507027;507028;507029;507030;507031;507032;507033;507034;507035;507036;507037;507038;507039;507040;507041 402527;402528;402529;402530;402531;402532;402533;402534;402535;402536;402537;402538;402539;402540;402541;402542;402543;402544;402545;402546;402547;402548;402549;402550 402540 982 17 YETELAMR Unmodified 1011.4695 0.46953129 814 P05783 KRT18 Keratin, type I cytoskeletal 18 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.663 41.84 2 0.0048958 45927 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 108.92 82.322 4515800000 0 0 0 157000000 254000000 370250000 251180000 321170000 237350000 447150000 520530000 598290000 409220000 372370000 577310000 60015 814 53979 507042;507043;507044;507045;507046;507047;507048;507049;507050;507051;507052;507053 402551;402552;402553;402554;402555;402556;402557;402558;402559;402560;402561;402562;402563 402561 13 YETELAMRQSVENDIHGLRK Unmodified 2388.1856 0.1855923 814 P05783 KRT18 Keratin, type I cytoskeletal 18 yes yes 0 0 2 By MS/MS 3 0 1 1 72.809 68.862 4 0.0065267 83351 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 32.926 27.535 3993000 0 3993000 0 0 0 0 0 0 0 0 0 0 0 0 0 60016 814 53980 507054 402564 402564 1 YETELNLR Unmodified 1036.5189 0.51892433 56 CON__P02533;P02533 KRT14 Keratin, type I cytoskeletal 14 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.431 48.593 2 1.8131E-18 54952 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 174.21 101.17 + 5565700000 0 0 0 1154800000 341000000 302320000 220730000 532820000 188790000 586100000 471130000 381030000 823810000 246660000 316560000 60017 56 53981 507055;507056;507057;507058;507059;507060;507061;507062;507063;507064;507065;507066 402565;402566;402567;402568;402569;402570;402571;402572;402573;402574;402575;402576;402577;402578;402579;402580;402581 402565 17 YETGPGGTSR Unmodified 1023.4621 0.46213773 3091 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 10.414 10.581 2 0.0038686 8141 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 74.92 49.621 28060000 0 0 0 0 0 3724300 0 4342300 4514700 3961200 0 7034100 0 4483600 0 60018 3091 53982 507067;507068;507069;507070;507071;507072;507073;507074 402582;402583;402584;402585;402586;402587 402585 6 YETIHLTEEPTK Unmodified 1459.7195 0.71947463 4371 Q9H2P0 ADNP Activity-dependent neuroprotector homeobox protein yes yes 0 0 0 By MS/MS 2 0 1 1 51.632 47.711 3 0.032928 60071 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 26.112 18.502 4406400 0 0 4406400 0 0 0 0 0 0 0 0 0 0 0 0 60019 4371 53983 507075 402588;402589 402589 2 YETMQCFAVSQPK Unmodified 1587.7061 0.70614953 2551 Q15596 NCOA2 Nuclear receptor coactivator 2 yes yes 0 0 0 By MS/MS 2 0 1 1 66.032 60.115 2 7.8031E-07 76854 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.29 98.562 23016000 0 23016000 0 0 0 0 0 0 0 0 0 0 0 0 0 60020 2551 53984 507076 402590 402590 1 YETSGIGEAR Unmodified 1081.504 0.50400254 1857 P61764 STXBP1 Syntaxin-binding protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 25.043 24.83 2 0.0014403 26843 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 106.42 77.274 139130000 0 31089000 0 2977800 4756200 14684000 8271600 4868300 6050600 13596000 14339000 0 11068000 9097100 18333000 60021 1857 53985 507077;507078;507079;507080;507081;507082;507083;507084;507085;507086;507087;507088;507089 402591;402592;402593;402594;402595;402596;402597;402598;402599;402600;402601 402591 11 YETSGIGEARVK Unmodified 1308.6674 0.66737948 1857 P61764 STXBP1 Syntaxin-binding protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.29 0.452 5 2 1 4 2 34.131 29.641 2;3 0.00011566 41290 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 99.5 83.87 337600000 16330000 132780000 188490000 0 0 0 0 0 0 0 0 0 0 0 0 60022 1857 53986 507090;507091;507092;507093;507094;507095;507096 402602;402603;402604;402605;402606;402607 402605 2 YETSSTSAGDRYDSLLGR Unmodified 1976.9076 0.90756276 232 O14974 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 55.837 56.045 3 4.9373E-06 62932 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.463 69.34 54556000 0 0 0 0 2920500 5074200 0 4862300 2767700 5297600 6915800 5741100 6296700 4434900 10245000 60023 232 53987 507097;507098;507099;507100;507101;507102;507103;507104;507105;507106 402608;402609;402610;402611;402612;402613;402614;402615;402616;402617;402618 402612 11 YEVALAGPALELHNCMAK Oxidation (M) 2001.9652 0.96521776 4704 Q9NWV8 BABAM1 BRISC and BRCA1-A complex member 1 yes yes 0 1 0 By MS/MS 2 0 1 1 78.095 75.467 3 0.00093437 91682 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 46.892 41.761 5313100 0 0 5313100 0 0 0 0 0 0 0 0 0 0 0 0 60024 4704 53988 507107 402619 402619 6102 1 YEVAVPLCK Unmodified 1077.5529 0.55286699 4321;2143;4629 Q9H0B6;Q9NSK0;Q07866 KLC2;KLC4;KLC1 Kinesin light chain 2;Kinesin light chain 4;Kinesin light chain 1 no no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.293 61.386 2 0.0064261 70260 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 75.109 31.863 112940000 0 0 0 5464900 7213700 5408600 8269100 0 7433800 15247000 11633000 11587000 10143000 10711000 19831000 60025 4321;4629;2143 53989 507108;507109;507110;507111;507112;507113;507114;507115;507116;507117;507118;507119 402620;402621;402622;402623;402624;402625;402626;402627 402620 8 YEVDDIDEEGK Unmodified 1310.5514 0.55140625 3821 Q96ES7 CCDC101 SAGA-associated factor 29 homolog yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 40.992 40.816 2 0.015003 45900 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 60.342 52.022 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60026 3821 53990 507120;507121 402628;402629 402629 2 YEVEDFTGVYEEVDEEQYSK Unmodified 2457.0384 0.038361744 895 P09884 POLA1 DNA polymerase alpha catalytic subunit yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 85.527 81.523 2 1.3453E-71 101179 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 143.38 134.56 14428000 0 14428000 0 0 0 0 0 0 0 0 0 0 0 0 0 60027 895 53991 507122;507123 402630;402631 402630 2 YEVFRTEEEEK Unmodified 1457.6674 0.66743906 1020 P15374 UCHL3 Ubiquitin carboxyl-terminal hydrolase isozyme L3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.56 3.62 4 1 11 2 1 2 1 1 1 1 1 1 1 1 1 1 1 37.619 36.686 2;3 0.00037336 46113 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 79.659 64.12 204640000 16280000 27784000 49758000 6131100 3081800 5164200 3582200 0 2514700 5702400 11529000 16331000 6416900 14479000 35886000 60028 1020 53992 507124;507125;507126;507127;507128;507129;507130;507131;507132;507133;507134;507135;507136;507137;507138;507139 402632;402633;402634;402635;402636;402637 402634 5 YEVLENK Unmodified 893.44945 0.44944778 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 27.447 27.599 2 0.025588 29323 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 80.462 33.799 286380000 0 0 0 14846000 15031000 37364000 26242000 16869000 16295000 31857000 32393000 0 26997000 25630000 42853000 60029 643 53993 507140;507141;507142;507143;507144;507145;507146;507147;507148;507149;507150 402638;402639;402640;402641 402641 4 YEVTSGGGGTSR Unmodified 1169.5313 0.53127993 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 13 1 1 1 1 1 1 1 1 1 1 1 2 14.751 14.941 2 0.00046083 14525 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 96.342 76.038 609810000 0 0 0 129480000 20964000 36380000 27081000 114510000 18864000 37296000 46727000 48480000 50519000 28280000 51222000 60030 1029 53994 507151;507152;507153;507154;507155;507156;507157;507158;507159;507160;507161;507162;507163 402642;402643;402644;402645;402646;402647;402648;402649;402650;402651 402647 4 YEWDVAEAR Unmodified 1137.5091 0.50908792 980 P13639 EEF2 Elongation factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 57.186 57.297 2 0.0058337 64617 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.679 69.329 372400000 0 0 0 16110000 8715100 12854000 10392000 14535000 7032000 17207000 62199000 44371000 0 38035000 140950000 60031 980 53995 507164;507165;507166;507167;507168;507169;507170;507171;507172;507173;507174 402652;402653;402654;402655;402656;402657;402658;402659;402660;402661;402662 402659 10 YEWDVAEARK Unmodified 1265.6041 0.60405094 980 P13639 EEF2 Elongation factor 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.85 3.53 1 6 2 24 4 3 2 2 2 2 2 2 2 2 2 2 2 2 2 49.846 48.734 2;3 0.00093069 52355 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 64.39 53.289 7499400000 563610000 2635700000 2663400000 54325000 30781000 58519000 43695000 50258000 51876000 80508000 197790000 265820000 57072000 164840000 581140000 60032 980 53996 507175;507176;507177;507178;507179;507180;507181;507182;507183;507184;507185;507186;507187;507188;507189;507190;507191;507192;507193;507194;507195;507196;507197;507198;507199;507200;507201;507202;507203;507204;507205;507206;507207 402663;402664;402665;402666;402667;402668;402669;402670;402671;402672;402673;402674;402675;402676;402677;402678;402679;402680;402681;402682;402683;402684;402685;402686;402687;402688;402689;402690;402691;402692;402693;402694 402663 28 YEYHWADGTNIK Unmodified 1495.6732 0.67319314 3060 Q9H8S9;Q7L9L4 MOB1A;MOB1B MOB kinase activator 1A;MOB kinase activator 1B yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 53.058 52.897 3 0.0072119 67326 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 43.991 39.475 150220000 0 0 19395000 4456300 3581400 16818000 5450500 5386200 6470700 11644000 9065700 18949000 10324000 10062000 28621000 60033 3060 53997 507208;507209;507210;507211;507212;507213;507214;507215;507216;507217;507218;507219;507220 402695;402696;402697 402697 3 YEYPIQR Unmodified 967.47633 0.47633123 3929 Q96MX6 WDR92 WD repeat-containing protein 92 yes yes 0 0 0 By MS/MS 2 0 1 1 43.051 37.903 2 0.033036 49220 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.113 69.959 48246000 0 48246000 0 0 0 0 0 0 0 0 0 0 0 0 0 60034 3929 53998 507221 402698 402698 1 YEYPIQRSK Unmodified 1182.6033 0.60332266 3929 Q96MX6 WDR92 WD repeat-containing protein 92 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 33.989 29.179 3 0.011668 40654 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.451 56.784 50520000 43323000 0 7197300 0 0 0 0 0 0 0 0 0 0 0 0 60035 3929 53999 507222;507223 402699 402699 1 YEYQPFAGK Unmodified 1101.5131 0.51311067 453 O75083 WDR1 WD repeat-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.9 3.81 3 1 6 1 2 1 1 1 1 1 1 1 50.388 48.284 2 0.0047885 54680 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 116.88 78.751 2010900000 23010000 1820900000 16972000 5741700 0 0 0 2570000 0 0 23095000 23414000 0 19538000 75665000 60036 453 54000 507224;507225;507226;507227;507228;507229;507230;507231;507232;507233 402700;402701;402702;402703;402704;402705;402706;402707;402708;402709;402710 402706 9 YFAQEAISVLALA Unmodified 1394.7446 0.74456717 1272 P30154 PPP2R1B Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform yes yes 0 0 0 By MS/MS 2 0 1 1 100.68 92.554 2 0.015183 119130 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.982 43.817 5054600 5054600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60037 1272 54001 507234 402711 402711 1 YFAQEALTVLSLA Unmodified 1424.7551 0.75513185 1271 P30153 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 2 2 2 2 100.82 95.869 2 0.0021091 119763 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 86.624 76.101 334410000 179990000 154420000 0 0 0 0 0 0 0 0 0 0 0 0 0 60038 1271 54002 507235;507236;507237;507238 402712;402713 402713 2 YFASIHPASTK Unmodified 1220.619 0.61897272 3524 Q8TF05 PPP4R1 Serine/threonine-protein phosphatase 4 regulatory subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 44.053 38.726 3 0.008839 52637 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 44.299 35.813 150060000 107570000 30565000 11934000 0 0 0 0 0 0 0 0 0 0 0 0 60039 3524 54003 507239;507240;507241 402714;402715 402715 2 YFDACADAVSK Unmodified 1245.5336 0.53358811 5242 Q9Y5P4 COL4A3BP Collagen type IV alpha-3-binding protein yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 47.341 40.76 2 0.010112 53445 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.379 60.603 36728000 2305800 34422000 0 0 0 0 0 0 0 0 0 0 0 0 0 60040 5242 54004 507242;507243 402716 402716 1 YFDEISQDTGK Unmodified 1301.5776 0.57756142 1902 P62495 ETF1 Eukaryotic peptide chain release factor subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.607 46.773 2 1.9622E-05 51403 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 127.94 107.42 766010000 0 0 0 35877000 37210000 76070000 45345000 38265000 33431000 77728000 71428000 86787000 69110000 51353000 143410000 60041 1902 54005 507244;507245;507246;507247;507248;507249;507250;507251;507252;507253;507254;507255 402717;402718;402719;402720;402721;402722;402723;402724;402725;402726;402727;402728 402720 12 YFDGNLEK Unmodified 984.45526 0.45526144 5212 Q9Y4X5 ARIH1 E3 ubiquitin-protein ligase ARIH1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.886 38.067 2 0.012197 40922 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 75.189 50.558 215830000 0 0 0 9009700 11473000 13925000 11347000 14909000 9424400 15431000 21779000 27822000 31630000 23184000 25897000 60042 5212 54006 507256;507257;507258;507259;507260;507261;507262;507263;507264;507265;507266;507267 402729;402730;402731;402732;402733;402734;402735;402736 402733 8 YFDGSGGNNHAVEHYR Unmodified 1821.7819 0.78190874 1488 P45974 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 28.205 28.546 3 2.0435E-05 29786 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.324 72.269 45521000 0 0 0 0 0 5382100 2346900 0 0 5453200 5487200 7501400 0 0 19350000 60043 1488 54007 507268;507269;507270;507271;507272;507273 402737;402738 402737 2 YFDPANGK Unmodified 910.41848 0.418482 980 P13639 EEF2 Elongation factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.318 28.513 2 0.0044499 30191 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 110.63 98.08 400330000 0 0 0 21265000 9506200 15440000 9699600 14611000 8128000 22012000 65578000 47971000 20637000 34687000 130790000 60044 980 54008 507274;507275;507276;507277;507278;507279;507280;507281;507282;507283;507284;507285 402739;402740;402741;402742;402743;402744;402745;402746;402747;402748;402749;402750;402751 402749 10 YFDSCNGDLDPEIVK Unmodified 1770.7771 0.77706586 2036 Q00535 CDK5 Cyclin-dependent-like kinase 5 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 76.072 71.875 2 8.1739E-66 89780 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 191.26 187.17 150090000 0 150090000 0 0 0 0 0 0 0 0 0 0 0 0 0 60045 2036 54009 507286;507287 402752;402753 402753 2 YFDSGDYNMAK Unmodified 1309.5285 0.52850274 365;1780 O43768;P56211 ENSA;ARPP19 Alpha-endosulfine;cAMP-regulated phosphoprotein 19 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.71 3.81 2 1 4 2 1 1 1 1 1 49.84 48.056 2 0.00034633 53946 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 101.11 89.615 723480000 0 631600000 4677800 0 0 0 0 0 0 0 11115000 24360000 0 13255000 38474000 60046 365;1780 54010 507288;507289;507290;507291;507292;507293;507294 402754;402755;402756;402757;402758;402759 402755 5 YFDSGDYNMAK Oxidation (M) 1325.5234 0.52341736 365;1780 O43768;P56211 ENSA;ARPP19 Alpha-endosulfine;cAMP-regulated phosphoprotein 19 no no 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 38.821 33.026 2 0.015156 43193 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.867 87.338 542890000 16196000 526690000 0 0 0 0 0 0 0 0 0 0 0 0 0 60047 365;1780 54010 507295;507296 402760 402760 465 0 YFDTVPVAAAMCVLK Oxidation (M) 1699.8314 0.83135004 2528 Q15393 SF3B3 Splicing factor 3B subunit 3 yes yes 0 1 0 By MS/MS By MS/MS 2.25 0.433 3 1 1 3 89.147 84.828 2;3 9.5572E-05 105566 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.171 56.006 57400000 0 57400000 0 0 0 0 0 0 0 0 0 0 0 0 0 60048 2528 54011 507297;507298;507299;507300 402761;402762;402763 402762 4165 2 YFDTVPVAAAMCVLK Unmodified 1683.8364 0.83643542 2528 Q15393 SF3B3 Splicing factor 3B subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 96.405 91.742 2 1.7369E-30 114643 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.16 122.63 172670000 32609000 138700000 1365100 0 0 0 0 0 0 0 0 0 0 0 0 60049 2528 54011 507301;507302;507303;507304 402764;402765;402766 402764 3 YFEADPPGQVAASPDPTT Unmodified 1861.837 0.83702358 345 O43598 DNPH1 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 68.3 68.443 2 0.00010785 77892 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.672 76.943 38184000 0 0 0 1692700 0 0 0 0 0 0 6685200 7763900 0 4828600 17214000 60050 345 54012 507305;507306;507307;507308;507309 402767;402768;402769;402770;402771 402767 5 YFEDHQVQQAK Unmodified 1391.647 0.64697839 2745 Q5K651 SAMD9 Sterile alpha motif domain-containing protein 9 yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 26.938 23.282 3 0.041072 29386 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 35.71 25.589 19917000 0 13215000 6702200 0 0 0 0 0 0 0 0 0 0 0 0 60051 2745 54013 507310;507311 402772 402772 1 YFEESFK Unmodified 948.4229 0.42289868 4521 Q9HCS7 XAB2 Pre-mRNA-splicing factor SYF1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 46.138 41.449 2 0.029852 53729 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.163 73.881 289530000 0 276160000 13371000 0 0 0 0 0 0 0 0 0 0 0 0 60052 4521 54014 507312;507313 402773 402773 1 YFEEYALVNQDILENK Unmodified 1986.9575 0.95747307 1582 P49642 PRIM1 DNA primase small subunit yes yes 0 0 0 By MS/MS 2 0 1 1 90.407 85.511 3 0.029442 106396 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 28.627 21.899 25414000 0 25414000 0 0 0 0 0 0 0 0 0 0 0 0 0 60053 1582 54015 507314 402774 402774 1 YFEGVSPK Unmodified 925.45453 0.45453316 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 6 12 2 2 2 1 1 1 1 1 1 1 1 1 1 1 1 38.943 37.348 1;2 0.022229 50083 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.753 66.191 3406500000 194780000 2181400000 127600000 52051000 53973000 71924000 56147000 61810000 48303000 74406000 78513000 92058000 95932000 93063000 124550000 60054 1986 54016 507315;507316;507317;507318;507319;507320;507321;507322;507323;507324;507325;507326;507327;507328;507329;507330;507331;507332 402775;402776;402777;402778;402779;402780;402781;402782;402783;402784;402785;402786;402787 402779 12 YFEIQFSPGGEPDGGK Unmodified 1726.7839 0.7838658 2215 Q12965 MYO1E Unconventional myosin-Ie yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.08 3.33 2 1 9 1 2 1 1 1 1 1 1 1 1 1 80.476 79.124 2 1.1927E-10 98064 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.15 103.71 100420000 14770000 49607000 0 0 0 5150800 2336500 2189000 2913400 0 4542500 8167800 0 4807400 5936900 60055 2215 54017 507333;507334;507335;507336;507337;507338;507339;507340;507341;507342;507343;507344 402788;402789;402790;402791;402792;402793;402794;402795;402796;402797;402798 402791 11 YFELEVRVPQAEGPPK Unmodified 1857.9625 0.96249887 2381 Q14160 SCRIB Protein scribble homolog yes yes 0 0 1 By MS/MS 2 0 1 1 84.125 75.994 3 0.0048481 99318 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.188 32.444 9369400 9369400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60056 2381 54018 507345 402799 402799 1 YFFFDDGNGLK Unmodified 1321.5979 0.59790293 1825 P61009 SPCS3 Signal peptidase complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 2 1 1 1 1 1 1 1 83.686 83.826 2 0.001123 97064 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 74.92 65.737 33241000 0 0 0 0 0 5142000 1911600 5233800 4526300 4690000 0 4800600 0 2569200 4367100 60057 1825 54019 507346;507347;507348;507349;507350;507351;507352;507353;507354;507355 402800;402801;402802;402803;402804;402805;402806;402807;402808 402806 9 YFFGEGYTYGAQLQK Unmodified 1770.8253 0.82533668 2939 Q6P6C2 ALKBH5 RNA demethylase ALKBH5 yes yes 0 0 0 By MS/MS 2 0 1 1 84.81 76.68 2 0.032585 100128 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.841 39.408 8441200 8441200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60058 2939 54020 507356 402809 402809 1 YFFTGSR Unmodified 876.413 0.41300269 2882 Q6IA86 ELP2 Elongator complex protein 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 47.892 48.124 2 0.038679 54214 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 69.383 53.747 57691000 0 0 0 2947400 0 5252500 3113500 3827200 0 5988900 6135700 6576300 8480600 5966500 9402500 60059 2882 54021 507357;507358;507359;507360;507361;507362;507363;507364;507365;507366 402810 402810 1 YFFYSSGEK Unmodified 1126.4971 0.49712625 1605;1604 P49840;P49841 GSK3A;GSK3B Glycogen synthase kinase-3 alpha;Glycogen synthase kinase-3 beta no no 0 0 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 57.014 57.318 2 0.029817 65273 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 48.423 42.32 15549000 0 0 0 0 0 3113500 0 0 0 4707600 2626100 0 0 0 5102200 60060 1604;1605 54022 507367;507368;507369;507370 402811 402811 1 YFGCELGAQTQFDVK Unmodified 1761.8032 0.80322103 1751 P55010 EIF5 Eukaryotic translation initiation factor 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 79.209 75.639 2 2.4345E-15 93848 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 144.1 131.89 119480000 0 111210000 8271900 0 0 0 0 0 0 0 0 0 0 0 0 60061 1751 54023 507371;507372;507373;507374 402812;402813;402814;402815 402812 4 YFGDIISVGQR Unmodified 1253.6404 0.64043645 3779 Q96CN7 ISOC1 Isochorismatase domain-containing protein 1 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 76.636 76.843 2 0.00059844 88189 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.986 71.567 8005300 0 0 0 0 0 0 0 0 0 0 0 0 0 1539600 6465700 60062 3779 54024 507375;507376 402816 402816 1 YFGGTEDR Unmodified 943.40356 0.40356022 2626 Q16658 FSCN1 Fascin yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 20.045 20.613 2 0.014414 20297 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.525 27.752 98799000 0 0 0 0 0 0 0 0 0 0 28311000 0 0 0 70488000 60063 2626 54025 507377;507378 402817 402817 1 YFGGTEDRLSCFAQTVSPAEK Unmodified 2362.09 0.089960579 2626 Q16658 FSCN1 Fascin yes yes 0 0 1 By MS/MS 10 0 1 1 76.39 76.676 3 2.7612E-09 88074 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.568 53.532 19883000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19883000 60064 2626 54026 507379 402818 402818 1 YFHPPAHLQAK Unmodified 1307.6775 0.67749065 2832;4594 Q5VZF2;Q9NR56 MBNL2;MBNL1 Muscleblind-like protein 2;Muscleblind-like protein 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 1 2 2 2 2 2 2 2 2 2 2 36.199 36.407 2;3 0.00058883 40323 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 76.282 58.114 1128900000 0 0 0 46625000 36527000 82485000 79130000 84937000 87683000 98610000 98982000 107830000 100690000 99538000 205880000 60065 2832;4594 54027 507380;507381;507382;507383;507384;507385;507386;507387;507388;507389;507390;507391;507392;507393;507394;507395;507396;507397;507398;507399;507400;507401;507402 402819;402820;402821;402822;402823;402824;402825;402826;402827;402828;402829;402830;402831;402832 402820 12 YFHPPAHLQAR Unmodified 1335.6836 0.68363867 4646 Q9NUK0 MBNL3 Muscleblind-like protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 37.931 38.226 3 0.00018276 40835 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.228 60.688 431120000 0 0 0 0 0 58513000 28407000 28707000 56016000 37333000 0 99732000 38185000 0 84231000 60066 4646 54028 507403;507404;507405;507406;507407;507408;507409;507410 402833;402834;402835;402836 402833 4 YFIRDEFLR Unmodified 1257.6506 0.6506072 1938 P63092;Q5JWF2 GNAS Guanine nucleotide-binding protein G(s) subunit alpha isoforms short;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas yes no 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 71.208 71.416 3 0.0049489 81387 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.643 61.738 11242000 0 0 0 0 0 3047700 0 0 0 0 0 0 0 0 8194400 60067 1938 54029 507411;507412 402837 402837 1 YFLASLDR Unmodified 983.50763 0.50763136 2945 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.612 69.687 2 0.0068357 79939 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 94.662 62.727 273220000 0 0 0 10905000 11524000 11175000 18497000 16315000 13617000 22624000 26613000 34633000 31224000 28145000 47944000 60068 2945 54030 507413;507414;507415;507416;507417;507418;507419;507420;507421;507422;507423;507424 402838;402839;402840;402841;402842;402843;402844;402845;402846;402847;402848 402839 11 YFLPFELACQSK Unmodified 1501.7275 0.72753689 5276;5277 Q9Y6D5;Q9Y6D6 ARFGEF2;ARFGEF1 Brefeldin A-inhibited guanine nucleotide-exchange protein 2;Brefeldin A-inhibited guanine nucleotide-exchange protein 1 no no 0 0 0 By MS/MS By matching By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 91.352 89.429 2 0.0017198 104277 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.006 57.068 15793000 11984000 0 0 0 0 0 0 466370 0 0 0 0 0 759330 2583000 60069 5276;5277 54031 507425;507426;507427;507428 402849;402850 402849 2 YFLQGMGYIPSASMTR 2 Oxidation (M) 1852.8488 0.84879102 4889 Q9UGV2 NDRG3 Protein NDRG3 yes yes 0 2 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 6 1 1 1 1 1 1 75.288 75.429 2 0.0006286 87058 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 49.5 31.636 22917000 0 0 0 0 0 5221000 0 0 2305300 4220500 3305000 5209700 0 2655500 0 60070 4889 54032 507429;507430;507431;507432;507433;507434 402851;402852;402853;402854 402853 6243;6244 4 YFLQTEDAK Unmodified 1113.5342 0.53424004 4332 Q9H0K6 PUS7L Pseudouridylate synthase 7 homolog-like protein yes yes 0 0 0 By MS/MS 2 0 1 1 50.19 44.483 2 0.0024174 57881 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.4 96.945 43412000 0 43412000 0 0 0 0 0 0 0 0 0 0 0 0 0 60071 4332 54033 507435 402855 402855 1 YFLVGAGAIGCELLK Unmodified 1609.8538 0.85380004 1137 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 By MS/MS 2 0 1 1 95.198 92.707 2 0.029475 112219 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 52.79 46.944 496510 0 0 496510 0 0 0 0 0 0 0 0 0 0 0 0 60072 1137 54034 507436 402856 402856 1 YFPEYAEK Unmodified 1045.4757 0.47566253 4573 Q9NQR4 NIT2 Omega-amidase NIT2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 48.163 43.398 2 0.028065 56569 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.923 57.368 256730000 0 251440000 5292800 0 0 0 0 0 0 0 0 0 0 0 0 60073 4573 54035 507437;507438 402857 402857 1 YFPSSLSPVTPSESLPRPR Unmodified 2116.0953 0.095303954 4797 Q9P0U4 CXXC1 CXXC-type zinc finger protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 78.16 78.305 3 0.00041015 90456 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 49.606 35.774 80649000 0 0 0 0 0 5989400 0 9339600 5915500 12036000 6331000 11215000 5294900 7392500 17135000 60074 4797 54036 507439;507440;507441;507442;507443;507444;507445;507446;507447 402858;402859;402860;402861;402862;402863;402864;402865;402866;402867;402868 402859 11 YFQDADGCELAENITYLGRK Unmodified 2362.09 0.089960579 2862 Q69YN2 CWF19L1 CWF19-like protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 86.309 78.178 3 6.5798E-09 101932 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.784 57.98 13148000 13148000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60075 2862 54037 507448 402869 402869 1 YFQDQVSR Unmodified 1041.488 0.48795855 4094 Q9BQE5 APOL2 Apolipoprotein L2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.528 28.723 2 0.0059607 30979 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 138.9 99.353 543000000 0 0 0 19908000 29455000 33506000 39767000 39500000 30819000 44797000 61765000 85284000 55886000 44682000 57634000 60076 4094 54038 507449;507450;507451;507452;507453;507454;507455;507456;507457;507458;507459;507460 402870;402871;402872;402873;402874;402875;402876;402877;402878;402879;402880;402881;402882;402883;402884;402885;402886;402887;402888 402882 18 YFQFQEEGK Unmodified 1174.5295 0.52948901 257 O15144 ARPC2 Actin-related protein 2/3 complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.57 3.96 3 4 1 1 1 1 1 1 1 53.643 50.287 2 0.003482 56335 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.01 94.048 678570000 37408000 579170000 12368000 0 0 0 0 0 0 0 11236000 0 0 0 38383000 60077 257 54039 507461;507462;507463;507464;507465;507466;507467 402889;402890;402891;402892;402893;402894;402895;402896 402891 7 YFQHLLGK Unmodified 1004.5444 0.54435122 5206 Q9Y4L1 HYOU1 Hypoxia up-regulated protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 48.399 49.122 2 0.044396 54455 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 76.134 39.578 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60078 5206 54040 507468 402897 402897 1 YFQISQDEDESESED Unmodified 1819.6908 0.69081285 2937 Q6P5R6 RPL22L1 60S ribosomal protein L22-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 57.83 58.098 2 0.00080387 65893 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 61.593 60.006 75368000 0 0 0 0 0 9264900 5259000 5708600 0 10390000 11285000 15067000 5751900 5314900 7327800 60079 2937 54041 507469;507470;507471;507472;507473;507474;507475;507476;507477 402898;402899;402900;402901;402902;402903;402904 402904 7 YFQSNAEPR Unmodified 1110.5094 0.50942227 3556 Q8WV22 NSMCE1 Non-structural maintenance of chromosomes element 1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 2 1 24.152 24.297 2 0.006731 26001 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 74.301 63.435 36640000 0 0 0 3531400 3355100 2848600 3400200 3778800 2140100 3213100 5469800 5774800 0 3128500 0 60080 3556 54042 507478;507479;507480;507481;507482;507483;507484;507485;507486;507487;507488 402905;402906;402907;402908;402909;402910;402911;402912 402911 8 YFQTYFLTPSVK Unmodified 1492.7602 0.76021723 1382 P36915 GNL1 Guanine nucleotide-binding protein-like 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 83.716 83.744 2 0.00043532 97016 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 79.974 70.268 3038000 0 0 0 0 0 3038000 0 0 0 0 0 0 0 0 0 60081 1382 54043 507489;507490 402913;402914 402913 2 YFRQELER Unmodified 1139.5724 0.57235688 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 29.204 29.525 3 0.0090743 32029 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 72.23 55.46 196130000 0 0 0 0 0 26845000 16097000 447620 0 19961000 18396000 27532000 22476000 23319000 41060000 60082 3119 54044 507491;507492;507493;507494;507495;507496;507497;507498;507499 402915 402915 1 YFSERGDAVAK Unmodified 1241.6041 0.60405094 4987 Q9UL46 PSME2 Proteasome activator complex subunit 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 6 2 2 2 28.592 24.251 2;3 0.0027778 30502 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 105.2 79.301 4249300000 2682200000 830330000 736810000 0 0 0 0 0 0 0 0 0 0 0 0 60083 4987 54045 507500;507501;507502;507503;507504;507505 402916;402917;402918;402919;402920 402920 2 YFSERGDAVTK Unmodified 1271.6146 0.61461563 2127 Q06323 PSME1 Proteasome activator complex subunit 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching By matching By matching By matching By matching By MS/MS By matching 7.33 3.77 6 12 2 2 2 1 1 1 1 1 1 1 1 1 1 1 1 25.479 24.169 2;3 0.0031551 30628 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 121.36 79.484 3875700000 2522100000 531170000 747900000 2414000 2132800 3642500 3699000 3320800 2917700 7296100 6299500 8000800 4913900 7875200 22048000 60084 2127 54046 507506;507507;507508;507509;507510;507511;507512;507513;507514;507515;507516;507517;507518;507519;507520;507521;507522;507523 402921;402922;402923;402924;402925;402926 402925 4 YFSGAHDGDVYPAWSQK Unmodified 1926.8537 0.8536767 647 O95365 ZBTB7A Zinc finger and BTB domain-containing protein 7A yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 68.275 62.266 3 0.00021578 83050 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.387 46.607 24679000 20854000 0 3824400 0 0 0 0 0 0 0 0 0 0 0 0 60085 647 54047 507524;507525 402927;402928;402929 402927 3 YFSLIPTGFADEDINK Unmodified 1828.8883 0.88833087 4503 Q9HBU6 ETNK1 Ethanolamine kinase 1 yes yes 0 0 0 By MS/MS 2 0 1 1 96.472 91.65 2 0.036989 113606 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 64.918 53.187 47878000 0 47878000 0 0 0 0 0 0 0 0 0 0 0 0 0 60086 4503 54048 507526 402930 402930 0 YFSLPFCVGSK Unmodified 1303.6271 0.62709457 4528 Q9HD45 TM9SF3 Transmembrane 9 superfamily member 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 86.88 87.008 2 0.0019298 100615 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.056 47.037 25796000 0 0 0 0 0 2116600 0 3695500 2068600 2609700 0 3664000 1920400 1818200 7903400 60087 4528 54049 507527;507528;507529;507530;507531;507532;507533;507534;507535 402931;402932;402933;402934;402935;402936;402937;402938;402939 402933 9 YFSMTEVDR Oxidation (M) 1162.4965 0.49647433 794 P05089 ARG1 Arginase-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 34.322 34.467 2 0.0034777 38386 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 78.149 68.633 89849000 0 0 0 30144000 4995800 0 5969000 17924000 4224800 0 7009400 0 9366400 4550400 5665200 60088 794 54050 507536;507537;507538;507539;507540;507541;507542;507543;507544 402940;402941;402942;402943;402944;402945;402946 402945 960 7 YFSMTEVDRLGIGK Oxidation (M) 1630.8025 0.80249275 794 P05089 ARG1 Arginase-1 yes yes 0 1 1 By MS/MS By MS/MS By matching By matching By matching 10 0 5 1 1 1 1 1 66.218 66.294 3 0.0005026 76470 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 58.21 56.28 48010000 0 0 0 10900000 0 0 0 17558000 0 6644800 3733200 9173700 0 0 0 60089 794 54051 507545;507546;507547;507548;507549 402947;402948 402948 960 2 YFSSMAEFLK Oxidation (M) 1237.5689 0.56891099 3579 Q8WWY3 PRPF31 U4/U6 small nuclear ribonucleoprotein Prp31 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68.272 66.941 2 0.0042899 76923 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 64.711 52.756 187880000 21641000 17743000 6428900 9238400 9671700 10983000 11240000 10084000 9964000 17306000 11630000 19217000 10035000 9875500 12819000 60090 3579 54052 507550;507551;507552;507553;507554;507555;507556;507557;507558;507559;507560;507561;507562;507563;507564;507565 402949;402950;402951;402952;402953;402954;402955;402956;402957;402958;402959;402960;402961;402962;402963 402960 5077 15 YFSSMAEFLK Unmodified 1221.574 0.57399637 3579 Q8WWY3 PRPF31 U4/U6 small nuclear ribonucleoprotein Prp31 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84.302 83.324 2 0.0014533 104885 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.87 98.516 152300000 46319000 24298000 3083500 1161100 1572600 5658800 2384100 5062200 3550900 10156000 8042500 7016700 3643200 5102400 25245000 60091 3579 54052 507566;507567;507568;507569;507570;507571;507572;507573;507574;507575;507576;507577;507578;507579;507580 402964;402965;402966;402967;402968;402969;402970;402971;402972;402973 402966 10 YFSTTEDYDHEITGLR Unmodified 1945.8694 0.86938634 3792 Q96DA0 ZG16B Zymogen granule protein 16 homolog B yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 69.135 69.374 3 5.5001E-05 79556 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 75.463 71.858 31607000 0 0 0 0 0 4825900 0 6292000 0 0 2951300 8433600 3257200 0 5846800 60092 3792 54053 507581;507582;507583;507584;507585;507586 402974;402975;402976;402977;402978 402978 4 YFSVEEEEDQNVVPETTSEGYTFQVQDGAPGTFNF Unmodified 3959.7174 0.71736854 1682 P52292 KPNA2 Importin subunit alpha-1 yes yes 0 0 0 By MS/MS 2 0 1 1 97.232 92.459 3 2.8043E-11 114442 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 52.486 52.242 131290000 0 131290000 0 0 0 0 0 0 0 0 0 0 0 0 0 60093 1682 54054 507587 402979 402979 1 YFSWAEPQLK Unmodified 1267.6237 0.62372375 3198 Q86XN7 PROSER1 Proline and serine-rich protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 77.813 77.919 2 0.0018227 89215 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 88.37 67.468 91532000 0 0 0 0 3887700 7119300 4397200 10506000 6672400 8135800 9550300 7053300 7062100 8206200 18942000 60094 3198 54055 507588;507589;507590;507591;507592;507593;507594;507595;507596;507597;507598 402980;402981;402982;402983;402984;402985;402986;402987;402988;402989 402986 9 YFSYLSK Unmodified 906.44872 0.4487195 2945 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 51.128 51.334 2 0.023846 58056 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 94.006 42.434 241870000 0 0 0 0 18151000 18314000 19054000 0 15590000 29357000 0 36263000 27810000 38084000 39244000 60095 2945 54056 507599;507600;507601;507602;507603;507604;507605;507606;507607 402990;402991;402992;402993;402994;402995 402990 6 YFTCDEGHGIFVR Unmodified 1599.714 0.71401209 2391 Q14203 DCTN1 Dynactin subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 62.935 63.167 3 0.00011945 71293 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.617 75.441 32650000 0 0 0 0 0 6520900 0 0 0 0 0 0 5561500 3999700 16567000 60096 2391 54057 507608;507609;507610;507611 402996;402997 402996 2 YFTDAGLK Unmodified 913.45453 0.45453316 5280 Q9Y6E2 BZW2 Basic leucine zipper and W2 domain-containing protein 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 45.016 43.704 2 0.023989 54452 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 81.784 35.433 2581100000 59287000 1008900000 39106000 107290000 0 143930000 139030000 111380000 87053000 139680000 203450000 172200000 110480000 137620000 121680000 60097 5280 54058 507612;507613;507614;507615;507616;507617;507618;507619;507620;507621;507622;507623;507624;507625;507626 402998;402999;403000;403001 403001 4 YFTEAGLK Unmodified 927.47018 0.47018322 3043 Q7L1Q6 BZW1 Basic leucine zipper and W2 domain-containing protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 44.823 43.21 2 0.0068442 47337 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 94.262 43.225 3032900000 89171000 1411200000 72159000 0 0 134970000 0 0 106210000 169900000 198620000 206420000 171830000 177300000 295110000 60098 3043 54059 507627;507628;507629;507630;507631;507632;507633;507634;507635;507636;507637;507638;507639 403002;403003;403004;403005;403006;403007;403008;403009;403010;403011;403012;403013;403014;403015;403016 403005 15 YFTFEVQVLDDK Unmodified 1502.7293 0.72931103 5272 Q9Y6A4 CFAP20 Cilia- and flagella-associated protein 20 yes yes 0 0 0 By MS/MS 2 0 1 1 92.508 84.378 2 2.6115E-05 109284 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 127.76 117.84 10941000 10941000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60099 5272 54060 507640 403017;403018 403017 2 YFTLGLPTGSTPLGCYK Unmodified 1873.9284 0.92842155 1514;3506 P46926;Q8TDQ7 GNPDA1;GNPDA2 Glucosamine-6-phosphate isomerase 1;Glucosamine-6-phosphate isomerase 2 no no 0 0 0 By MS/MS 2 0 1 1 94.605 86.474 2 2.24E-35 111931 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 131.37 115.41 9446700 9446700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60100 1514;3506 54061 507641 403019 403019 1 YFVEAGAMAVR Unmodified 1212.5961 0.59612879 1067 P17987 TCP1 T-complex protein 1 subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.955 66.04 2 0.0021553 75379 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 80.239 62.999 123220000 0 0 0 3826400 3289400 11963000 4873000 6929000 4242800 10867000 13096000 13613000 6706100 8841100 34974000 60101 1067 54062 507642;507643;507644;507645;507646;507647;507648;507649;507650;507651;507652;507653 403020;403021;403022;403023;403024;403025;403026;403027;403028 403028 9 YFVISNTTGYNDR Unmodified 1548.7209 0.72087161 1567 P49354 FNTA Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha yes yes 0 0 0 By MS/MS 10 0 1 1 63.219 63.783 2 0.00078848 72064 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 84.17 47.477 10320000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10320000 60102 1567 54063 507654 403029;403030 403029 2 YFVTFPYPYMNGR Oxidation (M) 1669.7599 0.75989966 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 1 0 By MS/MS 10 0 1 1 84.767 84.946 2 0.0020363 98107 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.461 49.221 4804800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4804800 60103 4819 54064 507655 403031 403031 6194 1 YFYVSAEQVVQGMK Unmodified 1647.7967 0.79667909 704 O95881 TXNDC12 Thioredoxin domain-containing protein 12 yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 88.471 81.437 2;3 9.2479E-15 104530 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 150.66 134.05 91443000 57163000 34280000 0 0 0 0 0 0 0 0 0 0 0 0 0 60104 704 54065 507656;507657;507658 403032;403033;403034 403033 3 YFYVSAEQVVQGMK Oxidation (M) 1663.7916 0.79159371 704 O95881 TXNDC12 Thioredoxin domain-containing protein 12 yes yes 0 1 0 By MS/MS 2 0 1 1 79.941 71.811 2 0.00027321 94308 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.827 74.449 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60105 704 54065 507659 403035 403035 849 1 YGADVHTQSK Unmodified 1104.52 0.51998696 2129 Q06547 GABPB1 GA-binding protein subunit beta-1 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 7.18 3.74 3 1 7 1 2 1 1 1 1 1 1 1 1 9.4178 8.3924 2 8.0934E-11 10930 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 174.86 111.9 88061000 6188200 64224000 2361900 0 0 0 0 838550 726100 1410400 6728400 2317900 1984900 1280900 0 60106 2129 54066 507660;507661;507662;507663;507664;507665;507666;507667;507668;507669;507670 403036;403037;403038;403039;403040;403041;403042 403038 7 YGAFEVTEDTEK Unmodified 1387.6143 0.61434085 4266 Q9BZH6 WDR11 WD repeat-containing protein 11 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 55.906 49.615 2 3.5999E-24 64390 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 188.04 174.24 225780000 6997000 218780000 0 0 0 0 0 0 0 0 0 0 0 0 0 60107 4266 54067 507671;507672;507673 403043;403044;403045;403046 403044 4 YGAIRDIDLK Unmodified 1162.6346 0.63462279 2145 Q07955 SRSF1 Serine/arginine-rich splicing factor 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.57 3.96 3 4 1 1 1 1 1 1 1 54.327 51.99 3 0.02704 72470 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.353 19.067 1129500000 721340000 167870000 44494000 0 0 0 0 0 21362000 0 51851000 0 33554000 0 89068000 60108 2145 54068 507674;507675;507676;507677;507678;507679;507680 403047;403048 403048 2 YGALALQEIFDGIQPK Unmodified 1761.9301 0.93013611 1754 P55060 CSE1L Exportin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.29 0.452 5 2 3 3 1 98.68 94.205 2 2.3484E-45 116953 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 198.81 184 255180000 151320000 102500000 1357600 0 0 0 0 0 0 0 0 0 0 0 0 60109 1754 54069 507681;507682;507683;507684;507685;507686;507687 403049;403050;403051;403052;403053;403054;403055;403056;403057 403049 9 YGALPDQGIAK Unmodified 1131.5924 0.59242362 1971 P78318 IGBP1 Immunoglobulin-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 48.585 47.292 2 0.00045118 60076 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.68 84.191 677740000 17377000 402310000 4162300 11454000 9110500 21826000 14302000 13922000 9184500 24775000 29272000 32819000 20554000 21225000 45442000 60110 1971 54070 507688;507689;507690;507691;507692;507693;507694;507695;507696;507697;507698;507699;507700;507701;507702;507703 403058;403059;403060;403061;403062;403063;403064;403065;403066;403067;403068;403069;403070;403071;403072;403073 403061 12 YGALVICETSEQK Unmodified 1496.7181 0.71809442 1483 P43897 TSFM Elongation factor Ts, mitochondrial yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 61.49 56.142 2 0.0076518 72255 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.029 67.017 15061000 0 15061000 0 0 0 0 0 0 0 0 0 0 0 0 0 60111 1483 54071 507704;507705 403074;403075 403074 2 YGAPEDWELK Unmodified 1206.5557 0.55570376 2582 Q15813 TBCE Tubulin-specific chaperone E yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 64.247 64.393 2 0.017094 74167 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 49.16 34.397 66595000 0 0 0 2372600 0 8250400 0 4548200 0 7195100 9347900 8236800 4838300 5793400 16012000 60112 2582 54072 507706;507707;507708;507709;507710;507711;507712;507713;507714 403076;403077 403077 2 YGATDRSQDDGGENR Unmodified 1639.6823 0.68225427 2025 P98175 RBM10 RNA-binding protein 10 yes yes 0 0 1 By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 7.3531 7.4606 3 0.022204 4424 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 30.543 23.962 11673000 0 0 0 0 571960 551520 1599500 926320 0 1673500 0 1826400 2435000 2089000 0 60113 2025 54073 507715;507716;507717;507718;507719;507720;507721;507722 403078 403078 1 YGDGGSSFQSTTGHCVHMR Unmodified 2082.8636 0.86360623 1773 P55795 HNRNPH2 Heterogeneous nuclear ribonucleoprotein H2 yes yes 0 0 0 By MS/MS 10 0 1 1 35.155 35.462 3 2.1573E-36 38029 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 117.26 111.6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60114 1773 54074 507723 403079 403079 1 YGDGGSTFQSTTGHCVHMR Unmodified 2096.8793 0.8792563 1309 P31943 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 1 1 2 2 2 2 2 2 2 2 2 2 37.027 37.267 3;4 0.0014806 40025 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.417 36.479 336470000 0 0 0 6306000 3735000 21271000 10301000 11773000 20174000 24593000 30908000 62590000 35241000 38370000 71207000 60115 1309 54075 507724;507725;507726;507727;507728;507729;507730;507731;507732;507733;507734;507735;507736;507737;507738;507739;507740;507741;507742;507743;507744;507745 403080;403081;403082;403083;403084;403085;403086;403087;403088 403082 6 YGDGGSTFQSTTGHCVHMR Oxidation (M) 2112.8742 0.87417092 1309 P31943 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed yes yes 0 1 0 By MS/MS By matching By MS/MS By matching 10 0 4 1 1 1 1 27.058 27.425 3 0.00034102 29471 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 45.618 42.427 31482000 0 0 0 2441900 0 0 0 0 0 0 0 10628000 5567600 0 12845000 60116 1309 54075 507746;507747;507748;507749 403089 403089 1940 1 YGDGIQLTR Unmodified 1021.5193 0.51925868 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 2 2 2 1 2 2 2 2 2 1 45.11 45.229 2 1.1459E-08 49785 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 160.63 121.84 746320000 0 0 0 121120000 55201000 58020000 13237000 221990000 35058000 0 41572000 67919000 90208000 0 41992000 60117 1029 54076 507750;507751;507752;507753;507754;507755;507756;507757;507758;507759;507760;507761;507762;507763;507764;507765;507766;507767 403090;403091;403092;403093;403094;403095;403096;403097;403098;403099;403100;403101;403102;403103;403104;403105;403106;403107;403108;403109;403110;403111;403112;403113;403114;403115;403116;403117;403118 403099 28 YGDLANWMIPGK Oxidation (M) 1379.6544 0.65437195 1774 P55809;Q9BYC2 OXCT1;OXCT2 Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial;Succinyl-CoA:3-ketoacid coenzyme A transferase 2, mitochondrial yes no 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 80.721 75.584 2 0.003641 94684 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 78.098 68.74 34812000 9158900 23289000 2363400 0 0 0 0 0 0 0 0 0 0 0 0 60118 1774 54077 507768;507769;507770 403119;403120;403121 403119 2895 3 YGDLANWMIPGK Unmodified 1363.6595 0.65945733 1774 P55809;Q9BYC2 OXCT1;OXCT2 Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial;Succinyl-CoA:3-ketoacid coenzyme A transferase 2, mitochondrial yes no 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 87.962 82.827 2 0.0071294 105308 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.76 53.511 70436000 17589000 51392000 1455900 0 0 0 0 0 0 0 0 0 0 0 0 60119 1774 54077 507771;507772;507773 403122;403123 403123 2 YGDLYQASFDADSATLR Unmodified 1891.8588 0.85882166 4668 Q9NVH2 INTS7 Integrator complex subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 77.068 77.164 2 0.00022169 89190 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 83.314 68.438 35552000 0 0 0 0 1975900 2580100 0 2522200 0 5291900 2774400 4965100 1818400 3624000 10000000 60120 4668 54078 507774;507775;507776;507777;507778;507779;507780;507781;507782 403124;403125;403126;403127;403128;403129 403125 6 YGDSEFTVQSTTGHCVHMR Oxidation (M) 2226.9423 0.94225048 1692 P52597 HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 16 1 1 2 1 1 2 2 1 2 1 2 39.805 40.031 3;4 1.448E-05 43827 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 62.94 58.989 186350000 0 0 0 10645000 4559300 15606000 7405200 6729800 16853000 28086000 8705100 41717000 0 6145500 39902000 60121 1692 54079 507783;507784;507785;507786;507787;507788;507789;507790;507791;507792;507793;507794;507795;507796;507797;507798 403130;403131 403131 2739 2 YGDSEFTVQSTTGHCVHMR Unmodified 2210.9473 0.94733586 1692 P52597 HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 2 1 1 1 2 48.445 48.907 3;4 7.009E-07 54010 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.942 68.435 206570000 0 0 0 0 0 12557000 0 0 0 0 21859000 29470000 13241000 15832000 113610000 60122 1692 54079 507799;507800;507801;507802;507803;507804;507805;507806 403132;403133;403134;403135;403136;403137;403138 403133 6 YGDSGEQIAGFVK Unmodified 1369.6514 0.65139506 925 P10619 CTSA Lysosomal protective protein;Lysosomal protective protein 32 kDa chain;Lysosomal protective protein 20 kDa chain yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching 8.36 3.15 2 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 64.243 62.936 2 6.4207E-13 72964 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 134.84 134.84 311200000 3973000 157950000 0 41242000 8263800 16601000 7864100 16382000 6782700 8449700 11002000 11225000 11190000 10278000 0 60123 925 54080 507807;507808;507809;507810;507811;507812;507813;507814;507815;507816;507817;507818;507819;507820 403139;403140;403141;403142;403143;403144 403144 5 YGEAGEGPGWGGAHPR Unmodified 1596.707 0.70695288 1210 P26640 VARS Valine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 2 1 1 1 2 1 1 1 1 2 35.987 36.19 2;3 1.2813E-07 38883 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.972 63.068 318200000 0 0 0 10873000 8859500 39205000 11876000 12806000 10359000 32049000 24792000 35219000 22153000 36762000 73251000 60124 1210 54081 507821;507822;507823;507824;507825;507826;507827;507828;507829;507830;507831;507832;507833;507834;507835 403145;403146;403147;403148;403149;403150;403151;403152;403153;403154;403155;403156;403157;403158 403149 11 YGEDNRGYGGSQGGGR Unmodified 1628.6928 0.69275938 3664 Q92804 TAF15 TATA-binding protein-associated factor 2N yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.243 12.392 3 0.023942 10914 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 27.85 24.378 38487000 0 0 0 1878800 2265300 2246100 2163100 2250000 2002500 3781400 2011600 5876000 4447900 2416700 7147700 60125 3664 54082 507836;507837;507838;507839;507840;507841;507842;507843;507844;507845;507846;507847 403159 403159 1 YGEELAR Unmodified 836.40283 0.40283194 392 O60293 ZFC3H1 Zinc finger C3H1 domain-containing protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 22.9 23.165 2 0.048847 22988 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 64.803 25.967 87897000 0 0 0 0 5990700 8866200 0 6618700 3962300 9414500 9064900 12163000 13410000 9587600 8819600 60126 392 54083 507848;507849;507850;507851;507852;507853;507854;507855;507856;507857 403160 403160 1 YGEMPVDK Oxidation (M) 953.41643 0.41643309 2284 Q13418 ILK Integrin-linked protein kinase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 14.009 14.193 2 0.016688 13533 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 58.782 26.312 12926000 0 0 0 1900600 0 1818700 0 0 1715100 0 0 3212300 0 2430400 1849200 60127 2284 54084 507858;507859;507860;507861;507862;507863;507864;507865 403161;403162;403163;403164;403165;403166;403167 403167 3724 7 YGEMPVDK Unmodified 937.42152 0.42151847 2284 Q13418 ILK Integrin-linked protein kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 29.984 29.22 2 0.012181 36620 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.75 84.9 427510000 7388000 193790000 0 12963000 10895000 0 17122000 22062000 13903000 29579000 32050000 28908000 32995000 25853000 0 60128 2284 54084 507866;507867;507868;507869;507870;507871;507872;507873;507874;507875;507876;507877 403168;403169;403170;403171;403172;403173;403174;403175 403171 3 YGEPGEVFINK Unmodified 1251.6136 0.61355299 1151 P23246 SFPQ Splicing factor, proline- and glutamine-rich yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 59.769 58.434 2 0.00017112 67346 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 134.77 99.958 2214800000 27030000 1554000000 26753000 30608000 35998000 47707000 66524000 36210000 31863000 53871000 60501000 79208000 44628000 46421000 73469000 60129 1151 54085 507878;507879;507880;507881;507882;507883;507884;507885;507886;507887;507888;507889;507890;507891;507892;507893 403176;403177;403178;403179;403180;403181;403182;403183;403184;403185;403186;403187;403188;403189;403190;403191 403190 13 YGEPSEVFINR Unmodified 1309.6303 0.63026569 3589 Q8WXF1 PSPC1 Paraspeckle component 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 60.795 60.977 2 0.00029926 68885 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.57 96.214 44409000 0 0 0 3078200 0 0 3939700 0 0 0 8903500 7841800 4866900 5705400 10074000 60130 3589 54086 507894;507895;507896;507897;507898;507899;507900;507901 403192;403193;403194;403195;403196;403197;403198;403199 403193 8 YGEQGLR Unmodified 821.40317 0.40316629 440 O60884 DNAJA2 DnaJ homolog subfamily A member 2 yes yes 0 0 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 17.393 17.379 2 0.023412 17200 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 86.512 35.476 77548000 0 0 0 10526000 11022000 14865000 15632000 0 12769000 12734000 0 0 0 0 0 60131 440 54087 507902;507903;507904;507905;507906;507907 403200 403200 1 YGETANECGEAFFFYGK Unmodified 1988.8251 0.82507869 1564 P49321 NASP Nuclear autoantigenic sperm protein yes yes 0 0 0 By MS/MS 2 0 1 1 87.148 79.017 2 1.1327E-62 102946 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 162.32 157.24 23125000 23125000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60132 1564 54088 507908 403201;403202 403202 2 YGETCFPK Unmodified 1000.4324 0.43241751 1045 P17028 ZNF24 Zinc finger protein 24 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 36.229 36.304 2 0.029825 40736 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 55.902 34.355 36795000 0 0 0 5462100 2947900 5164700 0 2112400 3701100 3128500 0 0 7236800 0 7041200 60133 1045 54089 507909;507910;507911;507912;507913;507914;507915;507916 403203;403204 403204 2 YGEVEEMNVCDNLGDHLVGNVYVK Oxidation (M) 2768.2422 0.24218048 909 P0DN76;Q01081 U2AF1 Splicing factor U2AF 35 kDa subunit yes no 0 1 0 By MS/MS By MS/MS By matching 7.67 3.3 1 2 1 1 1 78.879 77.89 3 6.1409E-12 92739 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 77.847 70.653 38459000 0 24451000 0 0 0 0 0 0 0 6006600 0 0 0 0 8001700 60134 909 54090 507917;507918;507919 403205;403206 403206 1174 2 YGEVEEMNVCDNLGDHLVGNVYVK Unmodified 2752.2473 0.24726586 909 P0DN76;Q01081 U2AF1 Splicing factor U2AF 35 kDa subunit yes no 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 85.448 80.161 3 5.1338E-39 102330 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 118.16 110.71 31400000 25292000 0 6108100 0 0 0 0 0 0 0 0 0 0 0 0 60135 909 54090 507920;507921 403207;403208 403207 2 YGEYFPGTGDLR Unmodified 1373.6252 0.62518031 2314;3658 Q92769;Q13547 HDAC2;HDAC1 Histone deacetylase 2;Histone deacetylase 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.836 68.916 2 0.00039657 78084 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 80.706 72.385 874460000 0 0 0 38246000 45697000 76234000 48195000 59088000 41606000 71745000 83692000 105770000 71240000 95322000 137620000 60136 3658;2314 54091 507922;507923;507924;507925;507926;507927;507928;507929;507930;507931;507932;507933 403209;403210;403211;403212;403213;403214;403215;403216;403217;403218;403219;403220;403221;403222 403217 14 YGEYFPGTGDLRDIGAGK Unmodified 1914.9112 0.91119158 2314;3658 Q92769;Q13547 HDAC2;HDAC1 Histone deacetylase 2;Histone deacetylase 1 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.56 3.62 4 1 11 1 3 1 1 1 1 1 1 1 1 1 1 1 1 77.088 75.694 2;3 6.6016E-15 87171 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 92.264 86.604 902560000 63842000 430240000 43665000 0 5693200 31535000 10811000 27024000 25354000 35945000 26477000 26620000 14124000 23544000 137690000 60137 3658;2314 54092 507934;507935;507936;507937;507938;507939;507940;507941;507942;507943;507944;507945;507946;507947;507948;507949 403223;403224;403225;403226;403227;403228;403229;403230;403231;403232;403233;403234;403235;403236;403237;403238;403239;403240;403241;403242 403230 20 YGFIEGHVVIPR Unmodified 1385.7456 0.74557022 1031 P16070 CD44 CD44 antigen yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 74.215 74.407 3 0.0035033 85800 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.776 44.457 26166000 0 0 0 0 0 3007200 0 4201100 0 0 0 6483700 0 0 12474000 60138 1031 54093 507950;507951;507952;507953 403243;403244;403245 403245 3 YGGAPQALTLK Unmodified 1117.6132 0.61315906 689 O95782 AP2A1 AP-2 complex subunit alpha-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 54.13 53.907 2 0.0065748 61527 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 56.209 42.63 27816000 0 0 0 9989100 9451100 0 3631400 0 0 0 0 0 0 4744200 0 60139 689 54094 507954;507955;507956;507957 403246 403246 1 YGGDEIPFSPYR Unmodified 1399.6408 0.64083038 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.99 75.049 2 1.8791E-14 86467 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 153.97 27.657 811220000 0 0 0 28252000 33835000 60485000 39024000 38542000 36458000 70690000 89993000 114510000 45107000 58345000 195990000 60140 1124 54095 507958;507959;507960;507961;507962;507963;507964;507965;507966;507967;507968;507969 403247;403248;403249;403250;403251;403252;403253;403254;403255;403256;403257;403258;403259 403249 13 YGGDEIPFSPYRVR Unmodified 1654.8104 0.81035532 1124 P21333 FLNA Filamin-A yes yes 0 0 1 By MS/MS 2 0 1 1 80.01 71.88 3 0.0090794 94411 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 55.724 49.287 62717000 62717000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60141 1124 54096 507970 403260 403260 0 YGGEAQMR Oxidation (M) 926.39162 0.39161532 533 O75694 NUP155 Nuclear pore complex protein Nup155 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 2 1 1 1 1 6.3726 6.5005 2 0.03743 4314 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 44.692 34.942 34125000 0 0 0 1444600 1869400 2670500 3004400 3045100 1754300 6874300 2971600 0 3674200 3585400 3231000 60142 533 54097 507971;507972;507973;507974;507975;507976;507977;507978;507979;507980;507981;507982 403261;403262;403263 403261 3 YGGEAQMR Unmodified 910.3967 0.3967007 533 O75694 NUP155 Nuclear pore complex protein Nup155 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.7 13.862 2 0.0081248 12572 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.284 69.722 97389000 0 0 0 3627100 5777300 6959500 5231700 10174000 3060000 9411200 8362400 10340000 8964600 10142000 15338000 60143 533 54097 507983;507984;507985;507986;507987;507988;507989;507990;507991;507992;507993;507994 403264 403264 1 YGGIPNFSHR Unmodified 1146.557 0.55704117 3974 Q96RS0 TGS1 Trimethylguanosine synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 48.59 48.698 3 0.043552 55001 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 40.715 34.055 92246000 0 0 0 5857600 5314000 7467000 5902700 7059500 8085600 10062000 11511000 14535000 8226300 8225600 0 60144 3974 54098 507995;507996;507997;507998;507999;508000;508001;508002;508003;508004;508005 403265 403265 0 YGGISTASVDFEQPTR Unmodified 1726.8162 0.81622856 2025 P98175 RBM10 RNA-binding protein 10 yes yes 0 0 0 By MS/MS 10 0 1 1 69.122 69.243 2 0.00018994 79867 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 66.262 60.159 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60145 2025 54099 508006 403266 403266 1 YGGISTASVDFEQPTRDGLGSDNIGSR Unmodified 2798.3107 0.31072905 2025 P98175 RBM10 RNA-binding protein 10 yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 75.712 75.864 3 8.9968E-19 86954 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.377 59.111 21644000 0 0 0 0 0 6593300 0 0 0 0 0 0 0 0 15050000 60146 2025 54100 508007;508008 403267;403268 403267 2 YGGPNHIVGSPFK Unmodified 1371.6935 0.69353465 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 2 1 1 1 1 1 1 1 1 1 1 1 1 53.675 51.972 2;3 0.00065852 57473 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 51.726 43.213 657330000 439660000 10145000 15672000 22435000 8309900 18385000 10789000 16101000 0 15703000 21005000 23720000 0 22458000 32943000 60147 487 54101 508009;508010;508011;508012;508013;508014;508015;508016;508017;508018;508019;508020;508021;508022 403269;403270;403271;403272;403273;403274;403275;403276;403277;403278;403279;403280;403281;403282;403283;403284 403277 16 YGGPPPDSVYSGQQPSVGTEIFVGK Unmodified 2565.2387 0.23873331 407 O60506 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.47 3.59 3 2 10 4 1 1 1 1 1 1 1 1 1 1 1 82.023 80.886 2;3 8.8879E-179 99219 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 210.91 200.56 1015800000 0 891190000 5189900 0 0 8396900 5780100 5906300 7338500 16707000 11313000 13692000 6295000 12274000 31690000 60148 407 54102 508023;508024;508025;508026;508027;508028;508029;508030;508031;508032;508033;508034;508035;508036;508037 403285;403286;403287;403288;403289;403290;403291;403292;403293;403294;403295;403296;403297;403298;403299;403300;403301 403289 17 YGGPPPDSVYSGVQPGIGTEVFVGK Unmodified 2506.238 0.23800503 322 O43390 HNRNPR Heterogeneous nuclear ribonucleoprotein R yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 5 1 2 2 87.452 82.916 2;3 1.9582E-55 103981 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 167.29 160.85 1351500000 8928300 1335100000 7471400 0 0 0 0 0 0 0 0 0 0 0 0 60149 322 54103 508038;508039;508040;508041;508042 403302;403303;403304;403305 403304 4 YGGPPPGWEGPHPQR Unmodified 1630.7641 0.76407383 2 A0AV96 RBM47 RNA-binding protein 47 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 46.737 46.903 3 1.6097E-07 52663 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 83.729 80.695 212630000 0 0 0 8874700 8201700 15322000 13431000 12863000 15036000 18861000 23025000 27626000 26063000 13971000 29359000 60150 2 54104 508043;508044;508045;508046;508047;508048;508049;508050;508051;508052;508053;508054 403306;403307;403308;403309;403310;403311;403312;403313;403314;403315;403316;403317;403318;403319;403320;403321;403322;403323 403315 18 YGGPYHIGGSPFK Unmodified 1378.667 0.66698555 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.04 3.4 5 1 18 3 1 2 1 1 2 1 1 1 2 2 3 1 1 2 59.869 58.558 2;3 0.0006326 74152 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 77.527 60.091 1482700000 568150000 85925000 52244000 21069000 14587000 63694000 36742000 35843000 31743000 63558000 78162000 117640000 47003000 65392000 200890000 60151 1124 54105 508055;508056;508057;508058;508059;508060;508061;508062;508063;508064;508065;508066;508067;508068;508069;508070;508071;508072;508073;508074;508075;508076;508077;508078 403324;403325;403326;403327;403328;403329;403330;403331;403332;403333;403334;403335;403336;403337;403338;403339;403340;403341;403342 403336 12 YGGQPVPNFPSK Unmodified 1289.6404 0.64043645 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.75 3.88 1 2 2 7 3 1 1 1 1 1 1 1 1 1 60.67 59.931 2 3.0986E-14 65088 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 140.17 118.71 744600000 18149000 66215000 18301000 0 0 0 0 0 0 95095000 130420000 131160000 0 93321000 191940000 60152 1124 54106 508079;508080;508081;508082;508083;508084;508085;508086;508087;508088;508089;508090 403343;403344;403345;403346;403347;403348;403349;403350;403351;403352;403353;403354;403355;403356;403357;403358 403348 15 YGGSPRDPVLTLR Unmodified 1429.7678 0.76776222 3197 Q86XL3 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.157 55.288 3 0.026903 62570 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 25.322 18.593 54593000 0 0 0 2475700 2069700 3379400 4949400 4351800 3034400 4700100 4493000 5694100 4431000 5776100 9238300 60153 3197 54107 508091;508092;508093;508094;508095;508096;508097;508098;508099;508100;508101;508102 403359 403359 1 YGGSVGSQPPPVAPEPGPVPSSPSQEPPTK Unmodified 2926.4349 0.43486693 2100 Q04323 UBXN1 UBX domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.4 3.98 2 1 7 1 2 1 1 1 1 1 1 1 76.229 75.659 3;4 2.1397E-12 101539 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_1 35.655 23.575 139230000 10624000 50643000 0 0 6232800 10872000 6859400 0 0 8491800 12727000 0 0 8976200 23807000 60154 2100 54108 508103;508104;508105;508106;508107;508108;508109;508110;508111;508112 403360;403361;403362;403363;403364;403365;403366;403367;403368;403369;403370;403371;403372 403370 13 YGIENVK Unmodified 821.42832 0.42831841 724 P00390 GSR Glutathione reductase, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 3 6 1 1 1 1 1 1 1 1 1 33.186 31.683 2 0.030762 33613 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 74.439 46.016 1446600000 30673000 1311900000 18726000 4904700 0 5303700 4295100 0 0 0 19145000 0 0 11560000 40027000 60155 724 54109 508113;508114;508115;508116;508117;508118;508119;508120;508121 403373;403374;403375;403376 403376 4 YGIEPTMVVQGVK Unmodified 1419.7432 0.74318696 3 A0AVT1 UBA6 Ubiquitin-like modifier-activating enzyme 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.12 3.89 3 1 4 1 2 1 1 1 1 1 77.856 75.581 2 0.0010161 87399 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.533 68.293 730270000 9277800 676990000 5718400 0 0 5533900 0 0 0 0 8998400 0 0 5576400 18169000 60156 3 54110 508122;508123;508124;508125;508126;508127;508128;508129 403377;403378;403379;403380;403381;403382;403383 403379 7 YGIICMEDLIHEIYTVGK Unmodified 2153.0537 0.053698415 1072 P18124 RPL7 60S ribosomal protein L7 yes yes 0 0 0 By MS/MS 3 0 1 1 99.619 96.21 3 0.0036969 115466 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 41.86 31.902 3391200 0 3391200 0 0 0 0 0 0 0 0 0 0 0 0 0 60157 1072 54111 508130 403384 403384 1 YGINDNGTTEPR Unmodified 1335.6055 0.6055075 217 O14802 POLR3A DNA-directed RNA polymerase III subunit RPC1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 31.098 31.343 2 0.0001361 34198 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 96.342 72.187 25958000 0 0 0 3008700 0 4413800 0 0 0 0 4437000 0 4974200 3277800 5846700 60158 217 54112 508131;508132;508133;508134;508135;508136;508137 403385;403386;403387;403388;403389;403390;403391;403392 403386 8 YGINNIR Unmodified 848.45045 0.45045083 5090 Q9Y285 FARSA Phenylalanine--tRNA ligase alpha subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 37.998 38.239 2 0.022164 41807 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 105.42 67.048 209020000 0 0 0 0 12098000 13758000 14146000 21920000 9357300 21190000 27196000 26121000 16346000 19515000 27373000 60159 5090 54113 508138;508139;508140;508141;508142;508143;508144;508145;508146;508147;508148 403393;403394;403395;403396;403397;403398;403399;403400;403401 403399 9 YGINTDPPK Unmodified 1003.4975 0.4974606 5151 Q9Y3B4 SF3B6 Splicing factor 3B subunit 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.8 3.37 1 2 7 1 2 1 1 1 1 1 1 1 35.112 33.834 2 0.0050719 37783 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 84.498 58.671 811600000 312060 470880000 0 0 0 31184000 0 31916000 31799000 41961000 70161000 0 49083000 0 84301000 60160 5151 54114 508149;508150;508151;508152;508153;508154;508155;508156;508157;508158 403402;403403;403404;403405;403406;403407;403408;403409 403408 5 YGIPEPPEPK Unmodified 1125.5706 0.57062555 2025;1699 P52756;P98175 RBM5;RBM10 RNA-binding protein 5;RNA-binding protein 10 no no 0 0 0 By MS/MS 2.5 0.5 1 1 2 61.575 56.228 2 0.0021147 72664 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.57 92.424 57547000 0 57547000 0 0 0 0 0 0 0 0 0 0 0 0 0 60161 1699;2025 54115 508159;508160 403410;403411 403411 2 YGIQADAK Unmodified 864.43413 0.43413207 3735 Q96AC1 FERMT2 Fermitin family homolog 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 22.5 21.645 2 0.01026 21820 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.229 54.402 819270000 29366000 621360000 4423400 7301800 7409200 22366000 11273000 8301500 8873300 17377000 16237000 14097000 13486000 16006000 21394000 60162 3735 54116 508161;508162;508163;508164;508165;508166;508167;508168;508169;508170;508171;508172;508173;508174;508175;508176 403412;403413;403414;403415;403416;403417;403418;403419;403420;403421;403422;403423;403424 403417 13 YGIQMPAFSK Oxidation (M) 1156.5587 0.55868065 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.08 3.42 6 19 2 2 2 2 1 2 2 1 1 2 2 2 1 1 2 53.63 52.262 2 1.9464E-06 70092 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 149.72 29.566 1254800000 114150000 160350000 8405900 85614000 44275000 153940000 87544000 0 48990000 131130000 115810000 120890000 47152000 28648000 107870000 60163 1518 54117 508177;508178;508179;508180;508181;508182;508183;508184;508185;508186;508187;508188;508189;508190;508191;508192;508193;508194;508195;508196;508197;508198;508199;508200;508201 403425;403426;403427;403428;403429;403430;403431;403432;403433;403434;403435;403436;403437;403438;403439;403440;403441;403442;403443;403444;403445;403446;403447 403437 2413 17 YGIQMPAFSK Unmodified 1140.5638 0.56376603 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76.374 75.391 2 1.2065E-05 87219 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 166.16 156.57 1916600000 412220000 130920000 10889000 75644000 77980000 145860000 70901000 79648000 98731000 140680000 139240000 132740000 85360000 101440000 214380000 60164 1518 54117 508202;508203;508204;508205;508206;508207;508208;508209;508210;508211;508212;508213;508214;508215;508216 403448;403449;403450;403451;403452;403453;403454;403455;403456;403457;403458;403459;403460;403461;403462;403463;403464;403465;403466;403467 403448 19 YGISNEKPEVK Unmodified 1262.6507 0.65066678 3366 Q8N7H5 PAF1 RNA polymerase II-associated factor 1 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 1 2 2 2 1 2 2 2 2 2 2 29.37 29.592 2;3 6.1462E-14 31969 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 192.64 167.02 1466600000 0 0 0 62938000 49249000 66219000 93535000 66824000 63908000 138600000 165330000 176720000 205740000 158880000 218650000 60165 3366 54118 508217;508218;508219;508220;508221;508222;508223;508224;508225;508226;508227;508228;508229;508230;508231;508232;508233;508234;508235;508236;508237;508238 403468;403469;403470;403471;403472;403473;403474 403471 4 YGIVDYMIEQSGPPSK Unmodified 1782.8498 0.84983687 982 P13667 PDIA4 Protein disulfide-isomerase A4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.54 3.59 6 3 19 2 5 2 1 2 1 1 1 2 1 2 2 2 2 2 84.627 83.299 2;3 8.1518E-15 97042 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 123.84 117.3 1250300000 334430000 613270000 114420000 1166600 3262100 3320800 4359800 6804800 12433000 7738500 32191000 18132000 10271000 17295000 71162000 60166 982 54119 508239;508240;508241;508242;508243;508244;508245;508246;508247;508248;508249;508250;508251;508252;508253;508254;508255;508256;508257;508258;508259;508260;508261;508262;508263;508264;508265;508266 403475;403476;403477;403478;403479;403480;403481;403482;403483;403484;403485;403486;403487;403488;403489;403490;403491;403492;403493;403494 403493 15 YGIVDYMIEQSGPPSK Oxidation (M) 1798.8448 0.8447515 982 P13667 PDIA4 Protein disulfide-isomerase A4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3.69 4 4 12 6 2 1 1 2 1 1 1 2 1 1 1 72.198 70.674 2;3 3.5803E-51 84989 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 166.04 157.94 510880000 0 361550000 55547000 4509000 5846900 0 12943000 5779000 5551200 9577700 26253000 10441000 7254300 5627000 0 60167 982 54119 508267;508268;508269;508270;508271;508272;508273;508274;508275;508276;508277;508278;508279;508280;508281;508282;508283;508284;508285;508286 403495;403496;403497;403498;403499;403500;403501;403502;403503;403504;403505;403506;403507;403508;403509;403510;403511;403512 403503 1327 16 YGLADVVENPGIITDIGMK Oxidation (M) 2020.0187 0.018693117 2955 Q6PIJ6 FBXO38 F-box only protein 38 yes yes 0 1 0 By MS/MS 2 0 1 1 95.635 90.771 2 1.5709E-05 112586 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.243 69.28 15049000 0 15049000 0 0 0 0 0 0 0 0 0 0 0 0 0 60168 2955 54120 508287 403513 403513 4584 1 YGLADVVENPGIITDIGMK Unmodified 2004.0238 0.023778495 2955 Q6PIJ6 FBXO38 F-box only protein 38 yes yes 0 0 0 By MS/MS 2 0 1 1 97.699 92.926 2 0.00012518 115076 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.756 81.554 21522000 0 21522000 0 0 0 0 0 0 0 0 0 0 0 0 0 60169 2955 54120 508288 403514 403514 1 YGLEGTVFFEEK Unmodified 1417.6765 0.67654718 5110 Q9Y2L1 DIS3 Exosome complex exonuclease RRP44 yes yes 0 0 0 By MS/MS 2 0 1 1 87.843 79.713 2 3.2405E-05 103737 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 102.52 82.194 8903900 8903900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60170 5110 54121 508289 403515 403515 1 YGLFAPVHK Unmodified 1030.56 0.56000128 1286 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 53.895 53.33 2 0.0083077 58556 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.998 59.133 144610000 23153000 0 0 7776500 0 12659000 8287400 5477100 0 8407400 13903000 18410000 11983000 12479000 22073000 60171 1286 54122 508290;508291;508292;508293;508294;508295;508296;508297;508298;508299;508300 403516;403517;403518;403519;403520;403521;403522;403523 403517 8 YGLFPANYVELRQ Unmodified 1568.7987 0.798728 2399 Q14247 CTTN Src substrate cortactin yes yes 0 0 1 By MS/MS 10 0 1 1 85.381 85.549 2 0.020448 98811 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.37 43.703 5494100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5494100 60172 2399 54123 508301 403524 403524 1 YGLIGLNGIGK Unmodified 1103.6339 0.63389451 4879 Q9UG63 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 78.284 78.465 2 0.0020286 89720 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 69.598 29.33 149030000 0 0 0 0 0 0 0 0 36797000 0 0 0 0 40603000 71633000 60173 4879 54124 508302;508303;508304 403525;403526;403527 403527 2 YGLIPGASNDFK Unmodified 1280.6401 0.6401021 3801 Q96DT7 ZBTB10 Zinc finger and BTB domain-containing protein 10 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 72.524 72.594 2 0.0005662 84006 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 77.662 61.329 118120000 0 0 0 7404300 7841300 9226300 6711100 4097500 5436300 15244000 9798900 9617600 14014000 13112000 15612000 60174 3801 54125 508305;508306;508307;508308;508309;508310;508311;508312;508313;508314;508315;508316;508317 403528;403529;403530;403531;403532;403533;403534;403535;403536;403537;403538 403536 11 YGLIPGTSNDFK Unmodified 1310.6507 0.65066678 3801 Q96DT7 ZBTB10 Zinc finger and BTB domain-containing protein 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 72.487 72.507 2 0.0092782 83750 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 58.699 48.994 114900000 0 0 0 7928900 11449000 21311000 7338500 0 0 13223000 9633800 0 15730000 11922000 16369000 60175 3801 54126 508318;508319;508320;508321;508322;508323;508324;508325;508326 403539;403540;403541;403542;403543;403544;403545;403546;403547 403545 8 YGLKPPTL Unmodified 887.51165 0.5116541 590 O94826 TOMM70A Mitochondrial import receptor subunit TOM70 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 76.791 70.256 2 0.015071 88197 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 123.69 115.78 29816000 3564600 26252000 0 0 0 0 0 0 0 0 0 0 0 0 0 60176 590 54127 508327;508328 403548 403548 1 YGLLFER Unmodified 896.4756 0.47560295 4345 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 70.755 70.891 2 0.04888 80459 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 64.757 44.203 94444000 0 0 0 0 4296500 8020000 6528600 6932500 5649000 8369500 8336000 9917500 9906000 9907500 16581000 60177 4345 54128 508329;508330;508331;508332;508333;508334;508335;508336;508337;508338;508339 403549 403549 1 YGLLNVTK Unmodified 906.51747 0.51746776 3248 Q8IWW6 ARHGAP12 Rho GTPase-activating protein 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 63.825 57.834 2 0.02739 77937 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 116.9 78.582 56193000 38070000 13561000 4562800 0 0 0 0 0 0 0 0 0 0 0 0 60178 3248 54129 508340;508341;508342 403550 403550 0 YGLLPESWPK Unmodified 1188.6179 0.61791009 3801 Q96DT7 ZBTB10 Zinc finger and BTB domain-containing protein 10 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 82.007 82.111 2 0.010197 94225 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 56.432 47.048 36993000 0 0 0 0 1361900 3561100 1078000 1552900 1872900 3823600 2881500 4390500 2180800 4667500 9622500 60179 3801 54130 508343;508344;508345;508346;508347;508348;508349;508350;508351;508352;508353 403551;403552;403553;403554 403553 4 YGLLPSHASYL Unmodified 1219.6237 0.62372375 3144 Q86U90 YRDC YrdC domain-containing protein, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 85.353 77.223 2 1.7402E-08 100807 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 161.9 148.32 111800000 111800000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60180 3144 54131 508354 403555 403555 0 YGLMPGPSNDFK Unmodified 1324.6122 0.61217279 3801 Q96DT7 ZBTB10 Zinc finger and BTB domain-containing protein 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 68.941 68.97 2 0.0047827 79321 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 56.432 43.395 32707000 0 0 0 4635300 2316500 2747300 0 2592200 0 0 0 5161600 3520200 4046300 7687900 60181 3801 54132 508355;508356;508357;508358;508359;508360;508361;508362;508363 403556;403557;403558;403559;403560;403561;403562 403556 7 YGLQLPAFSK Unmodified 1122.6073 0.6073454 3166 Q86VI3 IQGAP3 Ras GTPase-activating-like protein IQGAP3 yes yes 0 0 0 By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 80.908 81.06 2 0.0077624 93794 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 61.679 40.151 19329000 0 0 0 0 0 0 1468900 1966400 0 3482500 1945800 2950500 1706700 1840600 3967900 60182 3166 54133 508364;508365;508366;508367;508368;508369;508370;508371 403563 403563 1 YGLQNTEYEDEK Unmodified 1487.6416 0.64161824 3317 Q8N302 AGGF1 Angiogenic factor with G patch and FHA domains 1 yes yes 0 0 0 By MS/MS 2 0 1 1 42.963 37.815 2 8.2393E-10 49157 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 150.35 131.57 27951000 0 27951000 0 0 0 0 0 0 0 0 0 0 0 0 0 60183 3317 54134 508372 403564 403564 1 YGLTLDPEADSEYLSR Unmodified 1827.8527 0.85267365 659 O95425 SVIL Supervillin yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 81.949 82.045 2 0.0027367 95150 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 52.693 45.148 21425000 0 0 0 0 1701200 1666400 1149600 1899400 2049500 3058000 0 3574800 0 1873800 4452000 60184 659 54135 508373;508374;508375;508376;508377;508378;508379;508380;508381 403565;403566 403566 2 YGLVGLEPTK Unmodified 1075.5914 0.59136099 3571 Q8WW59 SPRYD4 SPRY domain-containing protein 4 yes yes 0 0 0 By MS/MS 2 0 1 1 71.066 65.249 2 0.0059744 82873 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.213 67.116 52626000 0 52626000 0 0 0 0 0 0 0 0 0 0 0 0 0 60185 3571 54136 508382 403567 403567 1 YGLVGPNGK Unmodified 903.48142 0.48141661 3421 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 33.317 33.448 2 0.0088914 36552 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 68.312 38.471 30982000 0 0 0 0 3702700 0 5147800 6716600 3780600 5701800 0 0 0 0 5932800 60186 3421 54137 508383;508384;508385;508386;508387;508388 403568;403569;403570;403571 403568 4 YGMNPHQTPAQLYTLQPK Oxidation (M) 2102.0255 0.025509829 1307 P31939 ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 59.201 59.623 3 1.0375E-26 67136 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 106.93 100.95 59205000 0 0 0 0 0 0 0 0 0 0 11279000 10655000 0 8254500 29017000 60187 1307 54138 508389;508390;508391;508392 403572;403573;403574 403573 1932 3 YGMSDVMPSGR Unmodified 1198.5111 0.51107853 2425 Q14671 PUM1 Pumilio homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 53.79 54.073 2 0.0016512 60298 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 71.349 54.573 74838000 0 0 0 0 0 4313400 4848500 5533800 3753800 5841800 8459700 11443000 6837000 7751200 16056000 60188 2425 54139 508393;508394;508395;508396;508397;508398;508399;508400;508401;508402;508403;508404 403575;403576;403577;403578;403579;403580;403581;403582;403583;403584 403580 10 YGMSDVMPSGR 2 Oxidation (M) 1230.5009 0.50090778 2425 Q14671 PUM1 Pumilio homolog 1 yes yes 0 2 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 19.439 19.584 2 0.0022145 19971 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 55.549 50.184 51966000 0 0 0 4175800 4802300 0 4987600 0 5105900 7238500 0 9036800 10869000 5750200 0 60189 2425 54139 508405;508406;508407;508408;508409;508410;508411;508412 403585;403586;403587;403588;403589;403590;403591;403592 403592 3982;3983 7 YGMSDVMPSGR Oxidation (M) 1214.506 0.50599315 2425 Q14671 PUM1 Pumilio homolog 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 36.841 37.097 2 0.0056092 41068 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 51.445 37.866 30187000 0 0 0 0 3328900 0 0 0 0 6828200 5046700 0 6248400 3169100 5566000 60190 2425 54139 508413;508414;508415;508416;508417;508418 403593;403594;403595;403596 403593 3982;3983 4 YGNANAWR Unmodified 950.43586 0.4358634 176 O00743 PPP6C Serine/threonine-protein phosphatase 6 catalytic subunit;Serine/threonine-protein phosphatase 6 catalytic subunit, N-terminally processed yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 25.991 26.223 2 0.03048 26665 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.504 37.519 38982000 0 0 0 2073400 2494000 4017200 0 0 0 3304800 4298900 5494600 5956400 4192500 7150400 60191 176 54140 508419;508420;508421;508422;508423;508424;508425;508426;508427 403597;403598;403599;403600 403597 4 YGNANVWK Unmodified 950.46102 0.46101552 1954;1906 P67775;P62714 PPP2CA;PPP2CB Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform;Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 8 3.46 3 9 1 1 1 1 1 1 1 1 1 1 1 1 34.899 33.862 2 0.010173 42373 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 132.96 111.41 1233800000 638690000 432730000 27337000 0 6408300 0 0 8260400 3978600 9120800 23869000 16677000 8111500 12759000 45898000 60192 1954;1906 54141 508428;508429;508430;508431;508432;508433;508434;508435;508436;508437;508438;508439 403601;403602;403603;403604;403605;403606;403607 403605 7 YGNPNYGGMK Unmodified 1099.4757 0.4756793 2699 Q53F19 C17orf85 Uncharacterized protein C17orf85 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 8.67 2.98 1 5 1 1 1 1 1 1 27.45 27.048 2 0.0054548 33709 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.642 67.495 36466000 0 18819000 0 0 0 0 0 0 0 3664900 3683500 0 3103100 2307400 4888100 60193 2699 54142 508440;508441;508442;508443;508444;508445 403608;403609 403609 2 YGPADVEDTTGSGATDSK Unmodified 1769.7592 0.75916719 1174 P24534 EEF1B2 Elongation factor 1-beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 39.274 38.732 2 2.628E-38 42351 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 164.81 158.37 413030000 0 13766000 0 15173000 10372000 48938000 17454000 8582100 13499000 22990000 43896000 35116000 18397000 43448000 121390000 60194 1174 54143 508446;508447;508448;508449;508450;508451;508452;508453;508454;508455;508456;508457;508458;508459;508460 403610;403611;403612;403613;403614;403615;403616;403617;403618;403619;403620;403621;403622;403623;403624 403614 15 YGPDAFFNFPGK Unmodified 1358.6295 0.62953741 1638 P50851 LRBA Lipopolysaccharide-responsive and beige-like anchor protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 89.316 84.648 2 0.0052409 107130 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 74.162 60.025 93717000 38491000 50581000 4644000 0 0 0 0 0 0 0 0 0 0 0 0 60195 1638 54144 508461;508462;508463;508464 403625;403626;403627 403627 3 YGPGEPSPVSETVVTPEAAPEK Unmodified 2240.0849 0.084858426 1315 P32004 L1CAM Neural cell adhesion molecule L1 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 67.914 68.144 2 2.0439E-10 78684 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 81.311 68.95 24693000 0 0 0 0 0 0 0 0 0 4073300 5571500 5353800 5924500 3769700 0 60196 1315 54145 508465;508466;508467;508468;508469;508470 403628;403629;403630 403629 3 YGPIADVSIVYDQQSR Unmodified 1809.8897 0.88972785 1935 P62995 TRA2B Transformer-2 protein homolog beta yes yes 0 0 0 By MS/MS By MS/MS By matching By matching 10 0 4 1 1 1 1 79.453 79.607 2 0.012419 92092 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 47.189 30.656 15941000 0 0 0 0 0 0 0 0 3071200 4369600 0 0 0 2385800 6114700 60197 1935 54146 508471;508472;508473;508474 403631 403631 1 YGPLPGPAVPR Unmodified 1122.6186 0.61857879 242 O15027 SEC16A Protein transport protein Sec16A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.335 63.427 2 0.00030182 72577 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 94.302 70.874 332530000 0 0 0 17024000 20257000 22389000 25484000 17875000 16004000 29846000 34794000 37798000 33557000 32615000 44885000 60198 242 54147 508475;508476;508477;508478;508479;508480;508481;508482;508483;508484;508485;508486 403632;403633;403634;403635;403636;403637;403638;403639;403640;403641;403642;403643;403644;403645;403646;403647;403648;403649 403634 16 YGPLSGVNVVYDQR Unmodified 1565.7838 0.78380622 2322 Q13595 TRA2A Transformer-2 protein homolog alpha yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 74.999 75.046 2 0.00062623 86522 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 78.653 68.965 76950000 0 0 0 3737700 3326900 6087400 3942800 0 3348600 7925700 7875800 11831000 6978500 4595500 17301000 60199 2322 54148 508487;508488;508489;508490;508491;508492;508493;508494;508495;508496;508497;508498 403650;403651;403652;403653;403654;403655;403656;403657;403658 403650 8 YGPPPSYPNLK Unmodified 1231.6237 0.62372375 2290 Q13435 SF3B2 Splicing factor 3B subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 54.183 54.318 2 1.9684E-05 61128 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 128.38 112.72 811750000 0 0 0 35250000 51702000 47729000 78723000 72598000 45965000 72264000 83783000 112910000 66193000 54632000 90004000 60200 2290 54149 508499;508500;508501;508502;508503;508504;508505;508506;508507;508508;508509;508510 403659;403660;403661;403662;403663;403664;403665;403666;403667;403668;403669;403670;403671;403672;403673;403674;403675;403676;403677 403666 19 YGPSLMPGGNK Unmodified 1119.5383 0.53827956 1680 P52209 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 48.26 48.48 2 0.00037948 53644 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.308 70.834 153460000 0 0 0 4537200 0 8658300 5953500 5744600 5440100 0 23584000 18095000 0 15206000 66238000 60201 1680 54150 508511;508512;508513;508514;508515;508516;508517;508518;508519 403678;403679;403680;403681 403679 4 YGQESEFLCLEFDEVK Unmodified 1991.8823 0.88225921 3356 Q8N668 COMMD1 COMM domain-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 93.075 84.944 2 7.6297E-16 110102 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 114.82 106.09 7662900 7662900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60202 3356 54151 508520 403682 403682 1 YGQFSGLNPGGRPITPPR Unmodified 1912.9908 0.9907793 1872 P62136 PPP1CA Serine/threonine-protein phosphatase PP1-alpha catalytic subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.099 66.184 3 6.8167E-11 76535 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 70.584 66.805 251960000 0 0 0 8052000 6153700 14393000 9993100 10770000 11606000 13370000 30658000 38168000 15453000 24075000 69263000 60203 1872 54152 508521;508522;508523;508524;508525;508526;508527;508528;508529;508530;508531;508532 403683;403684;403685;403686;403687;403688;403689;403690;403691;403692;403693;403694;403695;403696;403697 403696 15 YGQGAGEGSTR Unmodified 1081.4789 0.47885043 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.7877 6.9113 2 5.7562E-05 5151 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 114.4 96.416 107980000 0 0 0 5724200 7125500 9210400 7469300 8544800 10083000 9689500 11152000 6961500 8347700 9793600 13873000 60204 4285 54153 508533;508534;508535;508536;508537;508538;508539;508540;508541;508542;508543;508544 403698;403699;403700;403701;403702;403703;403704;403705;403706;403707;403708;403709 403703 12 YGQGAGEGSTREWASR Unmodified 1710.771 0.7710097 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 28.922 29.241 3 4.2741E-06 31258 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 78.932 49.919 7949800 0 0 0 0 0 0 0 0 0 0 0 0 0 7949800 0 60205 4285 54154 508545;508546;508547 403710;403711;403712 403712 3 YGQHPNIITLK Unmodified 1282.7034 0.70337105 2531;1672 Q15418;P51812;Q15349;Q9UK32 RPS6KA1;RPS6KA3;RPS6KA2;RPS6KA6 Ribosomal protein S6 kinase alpha-1;Ribosomal protein S6 kinase alpha-3;Ribosomal protein S6 kinase alpha-2;Ribosomal protein S6 kinase alpha-6 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 50.19 50.345 3 0.00030599 56568 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 69.864 51.805 674200000 0 0 0 30782000 17931000 97206000 52628000 34568000 30564000 70976000 56077000 56809000 69605000 47916000 109140000 60206 2531;1672 54155 508548;508549;508550;508551;508552;508553;508554;508555;508556;508557;508558;508559 403713;403714;403715;403716;403717;403718;403719;403720;403721;403722;403723;403724 403716 12 YGQHPPDAVDEPQMLTNEK Unmodified 2167.9844 0.98443288 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 57.717 56.387 3 7.3712E-10 73126 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.083 93.534 368600000 7763200 212010000 4734700 8115100 6938500 7533700 8014000 8598300 7560900 15596000 18765000 13463000 9241700 12624000 27646000 60207 1201 54156 508560;508561;508562;508563;508564;508565;508566;508567;508568;508569;508570;508571;508572;508573;508574;508575 403725;403726;403727;403728;403729;403730;403731;403732;403733;403734;403735;403736;403737;403738;403739;403740;403741;403742;403743;403744;403745;403746;403747 403731 21 YGQHPPDAVDEPQMLTNEK Oxidation (M) 2183.9793 0.9793475 1201 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 48.224 47.197 3 4.2714E-06 57412 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 76.573 72.853 229260000 0 115170000 0 8446600 13946000 0 14805000 12540000 16542000 18434000 0 0 0 12999000 16374000 60208 1201 54156 508576;508577;508578;508579;508580;508581;508582;508583;508584;508585 403748;403749;403750;403751;403752;403753;403754;403755;403756;403757 403753 1754 10 YGQISEVVVVK Unmodified 1219.6812 0.68123863 2362 Q14011 CIRBP Cold-inducible RNA-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 69.842 63.899 2 0.029779 81467 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 72.643 51.773 56925000 5904200 46639000 4382200 0 0 0 0 0 0 0 0 0 0 0 0 60209 2362 54157 508586;508587;508588 403758 403758 0 YGQLGHEDTTSLDRPR Unmodified 1843.8813 0.88128843 26 A6NED2 RCCD1 RCC1 domain-containing protein 1 yes yes 0 0 1 By MS/MS By matching By MS/MS 10 0 3 1 1 1 34.927 35.272 4 0.037021 37668 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 19.39 12.159 19567000 0 0 0 0 0 5445700 0 0 0 0 0 0 0 6013100 8108000 60210 26 54158 508589;508590;508591 403759 403759 1 YGQLGLGTDCK Unmodified 1210.5652 0.56522259 2725 Q5GLZ8 HERC4 Probable E3 ubiquitin-protein ligase HERC4 yes yes 0 0 0 By MS/MS 2 0 1 1 49.812 41.911 2 0.055855 58110 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.608 29.714 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60211 2725 54159 508592 403760 403760 1 YGQLSEK Unmodified 823.40758 0.40758296 207 O14737 PDCD5 Programmed cell death protein 5 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 13.844 14.065 2 0.024373 12997 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 99.139 59.921 157190000 0 0 0 2593000 0 3174900 0 0 4069700 7391500 26914000 29992000 5884000 21899000 55272000 60212 207 54160 508593;508594;508595;508596;508597;508598;508599;508600;508601 403761;403762 403762 2 YGQNESFAR Unmodified 1070.4781 0.47812215 1331 P33981 TTK Dual specificity protein kinase TTK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.522 23.727 2 0.0033925 24231 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 105.14 79.242 248690000 0 0 0 13556000 15595000 15781000 17058000 22118000 15690000 22577000 17553000 26059000 31179000 21071000 30456000 60213 1331 54161 508602;508603;508604;508605;508606;508607;508608;508609;508610;508611;508612;508613 403763;403764;403765;403766;403767;403768;403769;403770;403771;403772;403773 403772 10 YGQNGDFTR Unmodified 1056.4625 0.46247208 578 O76094 SRP72 Signal recognition particle subunit SRP72 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.697 21.903 2 0.0025264 22380 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 138.54 97.043 332270000 0 0 0 21116000 20176000 27239000 22073000 21452000 24764000 30899000 36823000 33865000 27886000 24301000 41680000 60214 578 54162 508614;508615;508616;508617;508618;508619;508620;508621;508622;508623;508624;508625 403774;403775;403776;403777;403778;403779;403780;403781;403782;403783;403784;403785;403786;403787 403785 14 YGQPIQMK Oxidation (M) 979.4797 0.47970205 686 O95757 HSPA4L Heat shock 70 kDa protein 4L yes yes 0 1 0 By matching By MS/MS 2 0 2 1 1 21.172 16.906 2 0.010364 22289 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.74 66.442 72985000 4787400 68198000 0 0 0 0 0 0 0 0 0 0 0 0 0 60215 686 54163 508626;508627 403788;403789 403788 832 2 YGQPIQMK Unmodified 963.48479 0.48478743 686 O95757 HSPA4L Heat shock 70 kDa protein 4L yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 40.443 33.82 2 0.034354 46833 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.039 35.393 14799000 14799000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60216 686 54163 508628;508629 403790;403791 403791 2 YGQQGSGSGQSPSR Unmodified 1394.6175 0.61746917 104 CON__Q86YZ3;Q86YZ3 HRNR Hornerin yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.1747 7.2983 2 2.7119E-136 4756 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 217.14 212.25 + 782650000 0 0 0 49592000 38330000 43661000 29222000 183750000 40124000 84986000 97911000 81241000 63568000 39126000 31137000 60217 104 54164 508630;508631;508632;508633;508634;508635;508636;508637;508638;508639;508640;508641 403792;403793;403794;403795;403796;403797;403798;403799;403800;403801 403795 10 YGQQGSGSGQSPSRGR Unmodified 1607.74 0.74004392 104 CON__Q86YZ3;Q86YZ3 HRNR Hornerin yes no 0 0 1 By MS/MS By matching By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 6.4125 6.5816 3 0.0058395 4557 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 37.77 29.171 + 11393000 0 0 0 2327900 0 0 0 0 0 0 1110300 4178100 3081400 0 695440 60218 104 54165 508642;508643;508644;508645;508646 403802;403803 403803 2 YGRDFQAISDVIGNK Unmodified 1681.8424 0.84238373 4971 Q9UKL0 RCOR1 REST corepressor 1 yes yes 0 0 1 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 74.129 74.258 3 0.0033141 84985 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.818 39.198 58219000 0 0 0 0 1063400 0 1594400 7126900 6513700 4414000 3577200 5046600 5510300 3534000 19839000 60219 4971 54166 508647;508648;508649;508650;508651;508652;508653;508654;508655;508656 403804 403804 1 YGRPPDSHHSR Unmodified 1307.6119 0.61193028 2050 Q01130 SRSF2 Serine/arginine-rich splicing factor 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 13 2 1 1 1 1 1 1 1 1 1 1 1 5.7258 5.8247 3 1.6318E-07 3008 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 129.74 118.53 226900000 0 0 0 14044000 3333600 13368000 14814000 18954000 18191000 17582000 15079000 21546000 17336000 18971000 53686000 60220 2050 54167 508657;508658;508659;508660;508661;508662;508663;508664;508665;508666;508667;508668;508669 403805;403806;403807;403808;403809;403810;403811;403812;403813 403807 6 YGRVAGCSVHK Unmodified 1232.6084 0.60842481 4972 Q9UKM9 RALY RNA-binding protein Raly yes yes 0 0 1 By MS/MS 2 0 1 1 14.702 10.654 3 0.028348 15909 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 35.523 16.743 6723200 6723200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60221 4972 54168 508670 403814 403814 1 YGSALASAGDPGHPNHPLHASQNSAR Unmodified 2611.2276 0.22760854 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 32.96 33.291 4 4.7191E-34 35193 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.123 91.677 70131000 0 0 0 0 0 9544200 0 7499300 0 0 15540000 0 10627000 9374900 17545000 60222 619 54169 508671;508672;508673;508674;508675;508676 403815;403816;403817;403818;403819;403820;403821;403822 403816 8 YGSDIVPFSK Unmodified 1111.555 0.55497548 974 P13010 XRCC5 X-ray repair cross-complementing protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.626 63.718 2 0.00049863 72817 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 124.74 102.61 1017000000 0 0 0 54174000 39953000 69605000 57259000 45935000 39906000 86148000 125020000 112020000 87741000 107840000 191370000 60223 974 54170 508677;508678;508679;508680;508681;508682;508683;508684;508685;508686;508687;508688 403823;403824;403825;403826;403827;403828;403829;403830;403831;403832;403833;403834;403835;403836;403837 403830 15 YGSEQEFVDDLK Unmodified 1428.6409 0.64088996 1119 P21128 ENDOU Poly(U)-specific endoribonuclease yes yes 0 0 0 By MS/MS 10 0 1 1 67.171 66.493 2 0.0019551 77019 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 64.439 41.909 4099400 0 0 0 4099400 0 0 0 0 0 0 0 0 0 0 0 60224 1119 54171 508689 403838 403838 1 YGSGGGSKGGSISGGGYGSGGGK Unmodified 1889.8504 0.85038223 79 CON__P35908v2;P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 17.597 17.789 3 2.2768E-08 17133 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.133 55.082 + 50378000 0 0 0 6408400 0 0 0 5694900 0 0 0 38275000 0 0 0 60225 79 54172 508690;508691;508692 403839;403840 403840 2 YGSGVLPDAPK Unmodified 1102.5659 0.56587452 3618 Q92541 RTF1 RNA polymerase-associated protein RTF1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 48.604 47.979 2 0.00025275 54181 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 105.52 78.523 673850000 0 407400000 0 13868000 11556000 20792000 19335000 16600000 14559000 27159000 31842000 26206000 32578000 23539000 28416000 60226 3618 54173 508693;508694;508695;508696;508697;508698;508699;508700;508701;508702;508703;508704;508705;508706 403841;403842;403843;403844;403845;403846;403847;403848;403849;403850;403851;403852;403853 403843 10 YGSLVPLSEK Unmodified 1091.5863 0.58627561 3867 Q96HI0 SENP5 Sentrin-specific protease 5 yes yes 0 0 0 By MS/MS 2 0 1 1 65.427 59.51 2 0.010638 76203 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 74.165 52.034 13186000 0 13186000 0 0 0 0 0 0 0 0 0 0 0 0 0 60227 3867 54174 508707 403854 403854 1 YGSPGNVSK Unmodified 907.43995 0.43994572 649 O95373 IPO7 Importin-7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 12.155 12.302 2 0.010961 11371 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 63.534 26.44 162950000 0 0 0 8169800 7739700 27567000 9481300 0 7100400 20567000 13073000 14255000 11691000 12824000 30477000 60228 649 54175 508708;508709;508710;508711;508712;508713;508714;508715;508716;508717;508718 403855;403856;403857;403858;403859;403860 403855 6 YGTELNQGDLK Unmodified 1236.5986 0.59863121 2225 Q13033 STRN3 Striatin-3 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 40.616 40.403 2 9.777E-11 50595 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 171.7 137.78 95812000 0 40186000 0 0 3087200 2839200 4774100 3573500 3621500 5023600 7218900 5591900 6683600 5178800 8034000 60229 2225 54176 508719;508720;508721;508722;508723;508724;508725;508726;508727;508728;508729;508730 403861;403862;403863;403864;403865;403866;403867;403868;403869;403870 403863 10 YGTFMAPDLFGSK Oxidation (M) 1448.6646 0.66460229 1522 P47712 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 82.726 81.611 2 5.2722E-21 101393 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 137.89 125.32 746390000 149230000 169250000 22125000 14823000 23042000 34787000 27155000 31604000 31535000 42219000 43327000 54121000 30419000 26322000 46426000 60230 1522 54177 508731;508732;508733;508734;508735;508736;508737;508738;508739;508740;508741;508742;508743;508744;508745;508746 403871;403872;403873;403874;403875;403876;403877;403878;403879;403880;403881;403882;403883;403884;403885;403886;403887;403888 403874 2421 18 YGTFMAPDLFGSK Unmodified 1432.6697 0.66968766 1522 P47712 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 86.864 85.61 2 8.3536E-10 107931 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 137.89 126.73 556050000 226770000 207120000 9108500 0 3842600 0 3482200 12736000 5760400 12410000 10011000 8380100 5517200 12888000 38031000 60231 1522 54177 508747;508748;508749;508750;508751;508752;508753;508754;508755;508756;508757;508758;508759;508760 403889;403890;403891;403892;403893;403894;403895;403896;403897;403898;403899;403900;403901 403895 13 YGTFVNEEK Unmodified 1085.5029 0.50293991 448 O60934 NBN Nibrin yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.13 1 1 7 2 1 1 1 1 1 1 1 34.393 33.434 2 0.0031624 36926 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 92.491 73.8 226780000 0 138370000 0 0 8709400 10562000 11909000 0 0 12057000 17650000 0 16295000 11226000 0 60232 448 54178 508761;508762;508763;508764;508765;508766;508767;508768;508769 403902;403903;403904;403905;403906;403907;403908;403909;403910;403911 403908 8 YGTVSSIAQLHVR Unmodified 1429.7678 0.76776222 3134 Q86TC9 MYPN Myopalladin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 1 1 2 2 2 2 2 1 2 2 3 61.724 61.901 2;3 4.2434E-07 69896 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 96.342 85.122 391830000 0 0 0 11682000 13037000 27952000 21543000 29431000 30832000 35652000 34700000 49851000 29194000 29293000 78662000 60233 3134 54179 508770;508771;508772;508773;508774;508775;508776;508777;508778;508779;508780;508781;508782;508783;508784;508785;508786;508787;508788;508789;508790 403912;403913;403914;403915;403916;403917;403918;403919;403920;403921;403922;403923;403924;403925;403926;403927;403928 403917 15 YGVAANNMK Oxidation (M) 982.45422 0.45421558 3631 Q92576 PHF3 PHD finger protein 3 yes yes 0 1 0 By MS/MS By matching 10 0 2 1 1 11.574 11.809 2 0.03017 11027 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 43.124 27.684 2334900 0 0 0 0 0 0 1405200 0 0 0 929700 0 0 0 0 60234 3631 54180 508791;508792 403929 403929 1 YGVDLIR Unmodified 834.45995 0.45995289 2984 Q6UXN9 WDR82 WD repeat-containing protein 82 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 57.681 57.8 2 0.028147 65617 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 76.847 46.178 307840000 0 0 0 17753000 16651000 21984000 24740000 20203000 22050000 28433000 25690000 29135000 24545000 34456000 42203000 60235 2984 54181 508793;508794;508795;508796;508797;508798;508799;508800;508801;508802;508803;508804 403930;403931;403932;403933 403932 4 YGVFCSGHNEAVSHYK Unmodified 1853.8155 0.81551705 3012 Q6ZSZ5 ARHGEF18 Rho guanine nucleotide exchange factor 18 yes yes 0 0 0 By MS/MS 2 0 1 1 50.379 42.479 3 0.0065262 58750 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 41.088 36.607 15308000 15308000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60236 3012 54182 508805 403934 403934 1 YGVFFDDDYDYLQHLK Unmodified 2036.9156 0.91560825 3850 Q96GA3 LTV1 Protein LTV1 homolog yes yes 0 0 0 By MS/MS 2 0 1 1 94.143 86.013 3 0.0004805 111281 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.682 60.078 21999000 21999000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60237 3850 54183 508806 403935 403935 1 YGVIILDEAHER Unmodified 1413.7252 0.72522871 295 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.065 65.152 3 0.0064481 74504 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 46.88 35.954 178660000 0 0 0 6933600 4794500 14121000 9422600 10651000 9396400 13129000 14840000 21283000 11295000 15059000 47732000 60238 295 54184 508807;508808;508809;508810;508811;508812;508813;508814;508815;508816;508817;508818 403936;403937;403938;403939;403940;403941;403942;403943;403944;403945 403943 10 YGVIIVGNPK Unmodified 1058.6124 0.61243078 3683 Q92900 UPF1 Regulator of nonsense transcripts 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.832 59.941 2 0.012899 69387 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 51.662 32.857 90304000 0 0 0 5032400 4913900 7538400 6649100 7516500 5833400 7827100 6955600 8085700 6056000 7783300 16112000 60239 3683 54185 508819;508820;508821;508822;508823;508824;508825;508826;508827;508828;508829;508830 403946 403946 1 YGVIYSTPLPEK Unmodified 1365.718 0.71801807 1795 P57682 KLF3 Krueppel-like factor 3 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.394 69.468 2 0.0043631 79041 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.1 57.524 218540000 0 0 0 8480500 8928300 11731000 17767000 11786000 15934000 23161000 29234000 22260000 17744000 20076000 31433000 60240 1795 54186 508831;508832;508833;508834;508835;508836;508837;508838;508839;508840;508841;508842 403947;403948;403949;403950;403951;403952;403953 403949 6 YGVNPGPIVGTTR Unmodified 1329.7041 0.70409934 1446;1447 P42166;P42167 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.89 57.01 2 0.0032812 65797 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 60.434 52.954 863690000 0 0 0 52645000 69348000 68967000 64974000 55284000 45739000 65827000 75210000 108060000 76063000 68018000 113550000 60241 1446;1447 54187 508843;508844;508845;508846;508847;508848;508849;508850;508851;508852;508853;508854 403954;403955;403956;403957;403958;403959;403960 403959 6 YGVNPGPIVGTTRK Unmodified 1457.7991 0.79906235 1446;1447 P42166;P42167 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 2 24 2 2 2 2 2 2 2 2 2 2 2 2 2 47.595 47.121 2;3 1.8941E-20 51796 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 122.97 119.25 2068700000 69854000 0 0 97464000 128420000 138440000 176840000 177950000 125720000 199450000 199950000 247640000 146260000 118530000 242170000 60242 1446;1447 54188 508855;508856;508857;508858;508859;508860;508861;508862;508863;508864;508865;508866;508867;508868;508869;508870;508871;508872;508873;508874;508875;508876;508877;508878;508879;508880 403961;403962;403963;403964;403965;403966;403967;403968;403969;403970;403971;403972;403973;403974;403975;403976;403977;403978;403979;403980;403981;403982;403983;403984;403985;403986;403987;403988;403989;403990;403991 403980 24 YGVQADAK Unmodified 850.41848 0.418482 4100 Q9BQL6 FERMT1 Fermitin family homolog 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 15.968 12.486 2 0.024584 16458 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.119 58.19 81140000 0 81140000 0 0 0 0 0 0 0 0 0 0 0 0 0 60243 4100 54189 508881;508882 403992 403992 1 YGVQADRVDK Unmodified 1149.5778 0.57783619 2399 Q14247 CTTN Src substrate cortactin yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.72 1.37 1 24 1 2 2 2 2 2 2 2 2 2 2 2 2 19.593 19.625 2;3 0.004198 19917 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 65.719 38.589 870270000 0 60446000 0 50949000 54785000 52557000 51813000 47941000 46707000 75951000 91227000 127040000 69261000 57736000 83855000 60244 2399 54190 508883;508884;508885;508886;508887;508888;508889;508890;508891;508892;508893;508894;508895;508896;508897;508898;508899;508900;508901;508902;508903;508904;508905;508906;508907 403993;403994;403995;403996;403997;403998;403999;404000;404001;404002;404003;404004 403995 6 YGVSEQTSLK Unmodified 1110.5557 0.55570376 2776 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 33.247 33.519 2 0.019368 35610 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.853 29.077 40649000 0 0 0 0 4065700 4379500 0 0 0 7277000 7469700 9925800 0 0 7531500 60245 2776 54191 508908;508909;508910;508911;508912;508913 404005;404006 404006 2 YGVSGGGFSSASNR Unmodified 1344.6058 0.60584185 960 P12035;CON__P12035 KRT3 Keratin, type II cytoskeletal 3 yes no 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 36.666 36.911 2 0.00075333 40131 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 81.625 71.844 + 21027000 0 0 0 0 0 3163300 2435400 2765500 0 0 0 12663000 0 0 0 60246 960 54192 508914;508915;508916;508917 404007;404008 404008 2 YGVSGYPTLK Unmodified 1083.5601 0.56006086 1270 P30101 PDIA3 Protein disulfide-isomerase A3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 4 2 12 3 2 1 1 1 1 1 1 1 1 1 1 1 1 1 56.819 54.892 2 2.1246E-05 73344 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 125.82 107.83 5226400000 1641900000 2760400000 113450000 27390000 22841000 21377000 33677000 30252000 24889000 32515000 105970000 102420000 33255000 67827000 208220000 60247 1270 54193 508918;508919;508920;508921;508922;508923;508924;508925;508926;508927;508928;508929;508930;508931;508932;508933;508934;508935 404009;404010;404011;404012;404013;404014;404015;404016;404017;404018;404019;404020;404021;404022;404023;404024;404025;404026;404027;404028;404029;404030;404031 404020 22 YGVTMEQIK Unmodified 1067.5321 0.53213155 3223 Q8IV50 LYSMD2 LysM and putative peptidoglycan-binding domain-containing protein 2 no no 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 50.48 50.276 2 0.038908 55881 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 44.753 31.756 7119500 0 0 0 2328000 0 0 0 0 0 0 0 0 0 4791600 0 60248 3223 54194 508936;508937 404032 404032 1 YGVTTLVR Unmodified 907.51272 0.51271674 2218 Q12974 PTP4A2 Protein tyrosine phosphatase type IVA 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.36 2.17 2 23 1 1 2 2 1 2 2 2 2 2 2 2 2 2 50.527 50.19 2 0.0052223 57381 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 107.67 0 1018100000 8318100 0 1922800 60463000 66578000 59827000 67590000 76238000 71723000 97783000 105010000 123360000 107420000 74010000 97857000 60249 2218 54195 508938;508939;508940;508941;508942;508943;508944;508945;508946;508947;508948;508949;508950;508951;508952;508953;508954;508955;508956;508957;508958;508959;508960;508961;508962 404033;404034;404035;404036;404037;404038;404039;404040;404041;404042;404043;404044;404045;404046;404047;404048;404049;404050 404045 16 YGVTTLVRVCDATYDK Unmodified 1859.9087 0.90874874 2218 Q12974 PTP4A2 Protein tyrosine phosphatase type IVA 2 yes yes 0 0 1 By MS/MS 2 0 1 1 77.526 69.395 3 0.010875 91427 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 40.52 25.825 14880000 14880000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60250 2218 54196 508963 404051 404051 1 YGWSADESGQIFICSQEESIKPK Unmodified 2658.2272 0.22718234 4851 Q9UBQ5 EIF3K Eukaryotic translation initiation factor 3 subunit K yes yes 0 0 1 By MS/MS 2 0 1 1 85.345 77.214 3 4.7236E-15 100791 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.721 86.446 27893000 27893000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60251 4851 54197 508964 404052;404053 404053 2 YGYEIPVDMLCK Unmodified 1486.6836 0.68362317 1819 P60900 PSMA6 Proteasome subunit alpha type-6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 5.4 3.77 2 1 2 2 1 1 1 85.986 83.952 2 1.6004E-05 104018 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 109.66 97.798 484290000 0 466530000 5224400 0 0 0 0 0 0 0 0 5139900 0 0 7394800 60252 1819 54198 508965;508966;508967;508968;508969 404054;404055;404056;404057;404058;404059;404060 404054 7 YGYEIPVDMLCK Oxidation (M) 1502.6785 0.67853779 1819 P60900 PSMA6 Proteasome subunit alpha type-6 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By matching 6.17 3.85 2 1 3 2 1 1 1 1 77.376 75.581 2 0.0057163 88085 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 48.64 22.981 202180000 0 176880000 6207300 6778200 0 0 0 0 0 0 0 0 0 2507300 9806000 60253 1819 54198 508970;508971;508972;508973;508974;508975 404061;404062;404063 404063 2956 3 YGYTDIDLLSAAK Unmodified 1428.7137 0.71366097 2572 Q15750 TAB1 TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 82.261 81.612 2 4.4993E-13 101011 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 121.36 105.7 204170000 0 130620000 3115500 1471700 2902800 4880100 3568100 5339600 4130400 6888400 6474800 8616600 2976900 5906500 17272000 60254 2572 54199 508976;508977;508978;508979;508980;508981;508982;508983;508984;508985;508986;508987;508988;508989;508990 404064;404065;404066;404067;404068;404069;404070;404071;404072;404073;404074;404075;404076;404077;404078 404068 15 YGYTEDPLEVR Unmodified 1340.6248 0.62484596 2456 Q14966 ZNF638 Zinc finger protein 638 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 64.169 64.254 2 0.00039947 74114 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 86.624 75.134 103850000 0 0 0 5181700 5315900 8731100 8714500 8753300 5943200 9868500 12250000 13609000 0 9730400 15750000 60255 2456 54200 508991;508992;508993;508994;508995;508996;508997;508998;508999;509000;509001 404079;404080;404081;404082;404083;404084;404085;404086;404087 404087 9 YGYTHLSTGDLLR Unmodified 1494.7467 0.74669243 734 P00568 AK1 Adenylate kinase isoenzyme 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 67.09 67.315 3 0.00037077 76229 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.078 72.356 85978000 0 0 0 0 0 18252000 0 0 0 0 0 0 0 17261000 50465000 60256 734 54201 509002;509003;509004 404088;404089 404089 2 YHAAVLTNSAEWEAACVK Unmodified 2018.952 0.95201054 3417 Q8NDH3 NPEPL1 Probable aminopeptidase NPEPL1 yes yes 0 0 0 By MS/MS 3 0 1 1 74.496 70.412 3 0.0086603 70237 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 34.498 25.214 1840400 1840400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60257 3417 54202 509005 404090 404090 1 YHAEEVEER Unmodified 1160.5098 0.5098162 2912 Q6NZY4 ZCCHC8 Zinc finger CCHC domain-containing protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 2 1 2 1 2 1 1 2 2 2 2 13.394 13.555 2;3 0.0085067 12583 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 69.423 60.511 81208000 0 0 0 3430100 5414000 4245200 5725100 2780900 4217800 5516200 5488000 14186000 6965500 9117100 14122000 60258 2912 54203 509006;509007;509008;509009;509010;509011;509012;509013;509014;509015;509016;509017;509018;509019;509020;509021;509022;509023;509024 404091;404092;404093;404094;404095;404096;404097;404098;404099;404100 404099 10 YHCAIPGSK Unmodified 1031.4859 0.48585006 3023 Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 By MS/MS 10 0 1 1 19.64 19.955 2 0.012989 19418 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 60.478 44.324 2687800 0 0 0 0 0 0 0 0 0 0 0 0 0 2687800 0 60259 3023 54204 509025 404101 404101 1 YHDEADQSALQR Unmodified 1431.6379 0.63787026 2189 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 19.867 20.23 2;3 0.00095315 20869 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 67.385 53.985 66720000 0 0 0 14294000 0 0 0 0 0 0 0 21629000 0 0 30797000 60260 2189 54205 509026;509027;509028;509029;509030;509031 404102;404103;404104;404105;404106 404105 5 YHDGIEK Unmodified 860.40283 0.40283194 4260 Q9BZD4 NUF2 Kinetochore protein Nuf2 yes yes 0 0 0 By matching By MS/MS 2 0 2 1 1 9.1217 6.1166 2 0.027336 8305 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 97.602 64.244 25243000 1166700 0 24076000 0 0 0 0 0 0 0 0 0 0 0 0 60261 4260 54206 509032;509033 404107 404107 1 YHDLAFQVK Unmodified 1119.5713 0.57129425 3968 Q96RK0 CIC Protein capicua homolog yes yes 0 0 0 By MS/MS 2 0 1 1 59.916 51.69 2 0.041628 70250 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 80.455 48.925 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60262 3968 54207 509034 404108 404108 1 YHEEFEK Unmodified 980.42396 0.42396131 2452 Q14847 LASP1 LIM and SH3 domain protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 16.001 15.114 2 0.01335 20174 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.98 123.22 1072500000 63226000 468000000 290450000 4907800 3641600 0 6845700 4413900 3366000 5068500 47632000 35175000 0 41567000 98174000 60263 2452 54208 509035;509036;509037;509038;509039;509040;509041;509042;509043;509044;509045;509046;509047;509048 404109;404110;404111;404112;404113;404114;404115;404116;404117;404118;404119;404120;404121;404122;404123;404124;404125 404111 17 YHEQLSTQSLIELFESFK Unmodified 2198.0895 0.089549874 2040 Q00610 CLTC Clathrin heavy chain 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 100.93 96.863 3 0.00017312 115902 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 62.203 57.444 10993000 0 10993000 0 0 0 0 0 0 0 0 0 0 0 0 0 60264 2040 54209 509049;509050 404126;404127 404127 2 YHESSQMSSLVETFVSK Unmodified 1957.9091 0.90914267 3095 Q7Z478 DHX29 ATP-dependent RNA helicase DHX29 yes yes 0 0 0 By MS/MS 2 0 1 1 89.056 80.925 3 6.7699E-14 105287 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 112.3 107.09 15077000 15077000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60265 3095 54210 509051 404128 404128 1 YHFEDVGGVQGAR Unmodified 1433.6688 0.66877646 4529 Q9HD47 RANGRF Ran guanine nucleotide release factor yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 45.431 45.922 3 0.0018412 50436 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.095 28.682 14158000 0 0 0 0 0 0 0 0 0 0 0 0 0 3032900 11125000 60266 4529 54211 509052;509053 404129 404129 1 YHGNVMLLR Unmodified 1101.5753 0.57533377 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 46.794 47.343 2 0.033807 52682 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 66.993 44.501 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60267 1565 54212 509054;509055;509056 404130;404131;404132 404132 3 YHGVSLLNPPETLNL Unmodified 1665.8726 0.87262123 1101 P20248 CCNA2 Cyclin-A2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 93.716 88.555 2 2.612E-06 111440 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 134.57 122.4 98026000 67015000 26025000 4985800 0 0 0 0 0 0 0 0 0 0 0 0 60268 1101 54213 509057;509058;509059 404133;404134;404135;404136;404137 404133 5 YHHCVGEK Unmodified 1028.4498 0.4497989 3487 Q8TCD5 NT5C 5'(3')-deoxyribonucleotidase, cytosolic type yes yes 0 0 0 By MS/MS 2 0 1 1 5.6981 2.3207 2 0.012141 5198 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 102.71 83.983 43106000 43106000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60269 3487 54214 509060 404138 404138 1 YHISVAEEGNDK Unmodified 1360.6259 0.62590859 3970 Q96RL7 VPS13A Vacuolar protein sorting-associated protein 13A yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 31.463 31.804 3 0.0037989 34037 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 37.236 31.288 43742000 0 0 0 0 0 4609900 0 0 7628900 7345200 0 12276000 4354500 0 7527700 60270 3970 54215 509061;509062;509063;509064;509065;509066 404139;404140 404140 2 YHLDSSVGGPGPAAGPGGTR Unmodified 1851.8864 0.88637381 3020 Q6ZW31 SYDE1 Rho GTPase-activating protein SYDE1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 45.013 45.235 3 0.00062246 50736 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 43.696 35.981 31332000 0 0 0 0 5051100 0 0 4536400 0 0 8655700 7740400 0 5348800 0 60271 3020 54216 509067;509068;509069;509070;509071 404141;404142 404141 2 YHLQERVDK Unmodified 1186.6095 0.60947067 1577 P49585 PCYT1A Choline-phosphate cytidylyltransferase A yes yes 0 0 1 By MS/MS By matching 2 0 2 1 1 22.928 19.039 3 0.016562 27295 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.04 40.814 27793000 27365000 0 428190 0 0 0 0 0 0 0 0 0 0 0 0 60272 1577 54217 509072;509073 404143 404143 1 YHNVGLSK Unmodified 916.47667 0.47666558 2365 Q14103 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.08 3.33 2 1 9 1 1 1 1 1 1 1 1 1 1 1 1 15.623 14.713 2 0.0023892 18690 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 127.56 49.816 1741500000 1025000000 25988000 465260000 0 11229000 19984000 12875000 18846000 15272000 32136000 0 0 0 32527000 82427000 60273 2365 54218 509074;509075;509076;509077;509078;509079;509080;509081;509082;509083;509084;509085 404144;404145;404146;404147;404148;404149;404150;404151;404152;404153;404154;404155;404156;404157 404154 12 YHPDEVGK Unmodified 943.43995 0.43994572 4230 Q9BXP5 SRRT Serrate RNA effector molecule homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 10.758 8.8066 2 0.0096686 13694 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 113.89 80.151 116670000 22929000 0 84660000 0 0 0 0 0 0 0 9078100 0 0 0 0 60274 4230 54219 509086;509087;509088 404158;404159;404160 404158 3 YHPDKNPNEGEK Unmodified 1426.6477 0.64770667 1303 P31689 DNAJA1 DnaJ homolog subfamily A member 1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 6.9225 4.0562 3 0.0031893 7102 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.802 34.052 30955000 10455000 0 20500000 0 0 0 0 0 0 0 0 0 0 0 0 60275 1303 54220 509089;509090 404161;404162;404163 404161 3 YHPGEENFK Unmodified 1119.4985 0.49852324 4979 Q9UKY1 ZHX1 Zinc fingers and homeoboxes protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 20.644 20.768 2 0.0094151 21389 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 66.799 48.814 69424000 0 0 0 5215100 5045500 5456300 6534800 0 0 13218000 0 0 17701000 7725500 8527100 60276 4979 54221 509091;509092;509093;509094;509095;509096;509097;509098;509099 404164;404165;404166;404167;404168 404167 5 YHPGYFGK Unmodified 967.4552 0.45520186 1507 P46776 RPL27A 60S ribosomal protein L27a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 29.025 28.327 2 0.01035 29286 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 79.939 49.495 539110000 118990000 0 18687000 11944000 21150000 39215000 0 0 34047000 0 55737000 69349000 52622000 43151000 74215000 60277 1507 54222 509100;509101;509102;509103;509104;509105;509106;509107;509108;509109;509110 404169;404170;404171;404172;404173;404174;404175;404176 404171 7 YHQGSGPILPR Unmodified 1223.6411 0.64110515 307 O43240 KLK10 Kallikrein-10 yes yes 0 0 0 By MS/MS By matching 10 0 3 2 1 34.276 34.228 2;3 0.0008681 38241 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 76.679 35.177 39788000 0 0 0 37031000 0 0 0 0 0 0 0 0 0 0 2757500 60278 307 54223 509111;509112;509113 404177;404178;404179 404178 3 YHQYIPPDQK Unmodified 1287.6248 0.62478638 4995;3728 Q9ULH7;Q8IZQ8;Q969V6 MKL2;MYOCD;MKL1 MKL/myocardin-like protein 2;Myocardin;MKL/myocardin-like protein 1 no no 0 0 0 By MS/MS By MS/MS 2 0 4 3 1 30.222 27.026 2;3 0.0037729 39078 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 115.86 94.397 3111500 0 0 3111500 0 0 0 0 0 0 0 0 0 0 0 0 60279 4995;3728 54224 509114;509115;509116;509117 404180;404181;404182;404183;404184 404182 5 YHRPEETHK Unmodified 1195.5734 0.57341951 3255 Q8IX12 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 5.5443 5.692 3 0.040697 2510 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 31.871 13.061 96141000 0 0 0 6487700 0 9308900 0 19229000 7521600 9115200 7360100 8143500 9030500 7944100 12000000 60280 3255 54225 509118;509119;509120;509121;509122;509123;509124;509125;509126;509127 404185 404185 1 YHSDDYIK Unmodified 1039.4611 0.4610751 2314 Q13547 HDAC1 Histone deacetylase 1 yes yes 0 0 0 By MS/MS 2 0 1 1 21.347 18.544 2 0.031271 23517 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 75.189 62.201 43240000 0 0 43240000 0 0 0 0 0 0 0 0 0 0 0 0 60281 2314 54226 509128 404186 404186 1 YHSDEYIK Unmodified 1053.4767 0.47672516 3658 Q92769 HDAC2 Histone deacetylase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.47 3.07 2 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18.937 18.31 2 3.2849E-07 18821 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 159.04 122.85 645660000 49560000 11997000 178640000 16086000 21107000 28653000 26145000 20550000 18172000 41717000 35820000 54612000 41310000 37073000 64218000 60282 3658 54227 509129;509130;509131;509132;509133;509134;509135;509136;509137;509138;509139;509140;509141;509142;509143 404187;404188;404189;404190;404191;404192;404193;404194;404195;404196;404197;404198;404199;404200 404187 14 YHSDFNRQDR Unmodified 1336.5909 0.59086049 2532 Q15424 SAFB Scaffold attachment factor B1 yes yes 0 0 1 By MS/MS 10 0 1 1 8.4023 8.7613 3 0.024801 6834 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 43.282 27.145 8628100 0 0 0 0 0 0 0 0 0 0 8628100 0 0 0 0 60283 2532 54228 509144 404201 404201 1 YHSLAPMYYR Unmodified 1299.607 0.60702783 1646;1104;1829 P51148;P61020;P20339 RAB5C;RAB5B;RAB5A Ras-related protein Rab-5C;Ras-related protein Rab-5B;Ras-related protein Rab-5A no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 1 1 3 3 1 1 2 1 1 2 2 50.813 51.004 2;3 0.00096636 57847 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 92.838 73.076 796270000 0 0 0 14653000 9425100 35416000 47157000 81761000 33247000 49054000 73776000 99778000 53338000 79254000 219410000 60284 1646;1829;1104 54229 509145;509146;509147;509148;509149;509150;509151;509152;509153;509154;509155;509156;509157;509158;509159;509160;509161;509162;509163 404202;404203;404204;404205;404206;404207;404208;404209;404210;404211;404212;404213;404214;404215;404216;404217;404218;404219;404220;404221;404222;404223;404224;404225 404206 22 YHSLAPMYYR Oxidation (M) 1315.6019 0.60194245 1646;1104;1829 P51148;P61020;P20339 RAB5C;RAB5B;RAB5A Ras-related protein Rab-5C;Ras-related protein Rab-5B;Ras-related protein Rab-5A no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 2 2 2 1 2 1 2 2 2 2 1 41.64 41.736 2;3 0.0034398 46814 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 69.825 47.588 949130000 0 0 0 64725000 51341000 85743000 13967000 124670000 9465900 131190000 210860000 0 135010000 99523000 22638000 60285 1646;1829;1104 54229 509164;509165;509166;509167;509168;509169;509170;509171;509172;509173;509174;509175;509176;509177;509178;509179;509180;509181;509182 404226;404227;404228;404229;404230;404231;404232;404233;404234;404235 404233 1590 3 YHSQYHTVAGNDIK Unmodified 1631.7692 0.76921879 1455 P42356 PI4KA Phosphatidylinositol 4-kinase alpha yes yes 0 0 0 By MS/MS 2 0 1 1 30.142 24.522 3 0.00024735 34440 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 59.607 46.489 21420000 21420000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60286 1455 54230 509183 404236 404236 1 YHTESLQNMSK Unmodified 1336.6082 0.60815004 615 O94992 HEXIM1 Protein HEXIM1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 2 1 2 2 1 2 2 2 2 2 1 27.026 27.212 2;3 0.0027028 29406 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 62.78 51.567 264440000 0 0 0 18824000 15628000 13238000 18333000 13140000 7858200 21909000 34001000 38661000 28582000 26442000 27821000 60287 615 54231 509184;509185;509186;509187;509188;509189;509190;509191;509192;509193;509194;509195;509196;509197;509198;509199;509200;509201;509202;509203;509204 404237;404238;404239;404240;404241;404242;404243;404244;404245;404246 404246 7 YHTESLQNMSK Oxidation (M) 1352.6031 0.60306466 615 O94992 HEXIM1 Protein HEXIM1 yes yes 0 1 0 By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 13.663 13.855 2 0.031101 13395 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 54.608 35.828 27803000 0 0 0 0 2038700 1639100 1547300 1520200 0 3560900 2249400 4632500 4307400 2732900 3574700 60288 615 54231 509205;509206;509207;509208;509209;509210;509211;509212;509213;509214 404247 404247 0 YHTINGHNAEVR Unmodified 1409.68 0.68000985 1141 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 14.507 14.85 3 3.4203E-09 13496 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 124.86 107.26 77282000 0 0 0 0 0 0 0 4522800 0 0 0 9460300 0 0 63299000 60289 1141 54232 509215;509216;509217 404248 404248 1 YHTINGHNAEVRK Unmodified 1537.775 0.77497287 1141 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.96 2.69 3 20 2 1 1 1 2 2 2 2 2 2 2 2 2 11.482 11.178 3;4 1.4515E-08 8487 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 104.17 89.781 908350000 274730000 0 2285000 4006700 0 5116300 16369000 23955000 26105000 27021000 87934000 132740000 42875000 67082000 198140000 60290 1141 54233 509218;509219;509220;509221;509222;509223;509224;509225;509226;509227;509228;509229;509230;509231;509232;509233;509234;509235;509236;509237;509238;509239;509240 404249;404250;404251;404252;404253;404254;404255;404256;404257;404258;404259;404260;404261;404262;404263;404264;404265;404266;404267;404268;404269 404255 9 YHTINGHNCEVK Unmodified 1470.6674 0.66739625 1679 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.8 3.92 6 9 3 1 2 1 1 1 1 1 1 1 1 1 14.892 13.533 2;3 6.3504E-14 20779 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 153.34 153.34 1908900000 1706000000 54532000 48174000 7419000 0 0 5592400 0 5328600 6669400 11734000 23553000 11843000 10057000 18025000 60291 1679 54234 509241;509242;509243;509244;509245;509246;509247;509248;509249;509250;509251;509252;509253;509254;509255 404270;404271;404272;404273;404274;404275;404276;404277;404278;404279;404280;404281;404282;404283;404284 404276 12 YHTSQSGDEMTSLSEYVSR Oxidation (M) 2191.9328 0.93279124 862 P08238 HSP90AB1 Heat shock protein HSP 90-beta yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 35 3 2 2 2 1 3 3 3 5 5 4 2 50.95 51.157 2;3 4.7233E-245 56158 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 234.21 230.63 2174600000 0 0 0 88597000 100210000 216880000 180600000 139280000 139110000 169950000 33209000 318460000 181820000 209610000 396920000 60292 862 54235 509256;509257;509258;509259;509260;509261;509262;509263;509264;509265;509266;509267;509268;509269;509270;509271;509272;509273;509274;509275;509276;509277;509278;509279;509280;509281;509282;509283;509284;509285;509286;509287;509288;509289;509290 404285;404286;404287;404288;404289;404290;404291;404292;404293;404294;404295;404296;404297;404298;404299;404300;404301;404302;404303;404304;404305;404306;404307;404308;404309;404310;404311;404312;404313;404314;404315;404316;404317;404318;404319;404320;404321;404322;404323;404324;404325;404326;404327;404328;404329;404330;404331;404332;404333;404334;404335;404336;404337;404338;404339;404340;404341;404342;404343;404344;404345;404346;404347;404348;404349;404350;404351;404352;404353 404308 1100 67 YHTSQSGDEMTSLSEYVSR Unmodified 2175.9379 0.93787661 862 P08238 HSP90AB1 Heat shock protein HSP 90-beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 2 2 2 2 2 2 2 2 2 2 66.911 67.063 2;3 8.7376E-96 75891 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 181.94 177.99 1876400000 0 0 0 0 23710000 189640000 35401000 91464000 60148000 150510000 181400000 189550000 71511000 125500000 757570000 60293 862 54235 509291;509292;509293;509294;509295;509296;509297;509298;509299;509300;509301;509302;509303;509304;509305;509306;509307;509308;509309;509310;509311;509312 404354;404355;404356;404357;404358;404359;404360;404361;404362;404363;404364;404365;404366;404367;404368;404369;404370;404371;404372;404373;404374;404375;404376;404377;404378;404379;404380;404381 404362 26 YHTVNGHNCEVR Unmodified 1484.6579 0.6578942 891 P09651 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 2 1 9.4569 9.6098 3 1.0293E-08 6031 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 136.7 128.19 72559000 0 0 0 2622100 1290500 1884500 0 334770 2428100 1802500 19567000 18143000 921280 6824400 16741000 60294 891 54236 509313;509314;509315;509316;509317;509318;509319;509320;509321;509322;509323;509324 404382;404383;404384;404385 404383 3 YHTVNGHNCEVRK Unmodified 1612.7529 0.75285722 891 P09651 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 2 20 2 1 2 1 2 2 2 2 2 2 2 2 7.2606 7.0587 3;4 9.2027E-26 5146 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 134.68 122.89 1011000000 566020000 0 0 4199300 0 9837700 1741600 7105500 10384000 18230000 85150000 72999000 38601000 58536000 138180000 60295 891 54237 509325;509326;509327;509328;509329;509330;509331;509332;509333;509334;509335;509336;509337;509338;509339;509340;509341;509342;509343;509344;509345;509346 404386;404387;404388;404389;404390;404391;404392;404393;404394;404395;404396;404397;404398;404399;404400;404401;404402 404393 11 YHYLGGR Unmodified 864.42424 0.42423608 3412 Q8NCW5 APOA1BP NAD(P)H-hydrate epimerase yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 18.473 18.967 2 0.033872 18094 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.575 62.334 23645000 0 0 0 0 0 0 0 0 0 0 0 5801300 0 3195200 14649000 60296 3412 54238 509347;509348;509349 404403 404403 1 YIAEAVASIVEAK Unmodified 1362.7395 0.73948179 4490 Q9HAU5 UPF2 Regulator of nonsense transcripts 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 2 2 1 88.307 82.955 2 0.0025494 105054 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.258 65.245 92764000 33107000 49016000 10642000 0 0 0 0 0 0 0 0 0 0 0 0 60297 4490 54239 509350;509351;509352;509353;509354 404404;404405;404406;404407 404407 4 YIAENGTDPINNQPLSEEQLIDIK Unmodified 2713.3447 0.34465494 5017 Q9UMS4 PRPF19 Pre-mRNA-processing factor 19 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.19 3.25 3 2 16 1 4 1 1 1 1 1 2 2 2 1 2 2 85.648 84.584 2;3 2.9396E-38 104595 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 146.3 131.94 1687800000 20999000 1380300000 0 0 16314000 11433000 7281800 16595000 10579000 44138000 40591000 35760000 6679800 16899000 80187000 60298 5017 54240 509355;509356;509357;509358;509359;509360;509361;509362;509363;509364;509365;509366;509367;509368;509369;509370;509371;509372;509373;509374;509375 404408;404409;404410;404411;404412;404413;404414;404415;404416;404417;404418;404419;404420;404421;404422;404423;404424;404425 404412 18 YIAEPSMHSMPAVTLSPNGK Unmodified 2129.0285 0.028546296 408 O60508 CDC40 Pre-mRNA-processing factor 17 yes yes 0 0 0 By MS/MS 2 0 1 1 80.567 72.436 3 1.2453E-08 95025 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.967 73.174 14681000 14681000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60299 408 54241 509376 404426 404426 1 YIAIASTTVETTDPEK Unmodified 1737.8673 0.86726108 1294 P31150 GDI1 Rab GDP dissociation inhibitor alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.43 2.72 4 2 1 2 3 1 1 67.306 62.628 2 2.6575E-38 82111 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 135.6 124.99 337130000 32369000 296720000 0 0 0 0 0 0 0 0 0 0 0 0 8045300 60300 1294 54242 509377;509378;509379;509380;509381;509382;509383 404427;404428;404429;404430;404431;404432 404431 6 YIAIVSTTVETK Unmodified 1323.7286 0.72858275 1620 P50395 GDI2 Rab GDP dissociation inhibitor beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.22 0.629 1 5 3 5 3 1 75.744 71.262 2 8.3058E-15 86532 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 145.89 138.76 380270000 178220000 184770000 17287000 0 0 0 0 0 0 0 0 0 0 0 0 60301 1620 54243 509384;509385;509386;509387;509388;509389;509390;509391;509392 404433;404434;404435;404436;404437;404438;404439;404440;404441;404442;404443;404444;404445 404443 13 YIAIVSTTVETKEPEK Unmodified 1806.9615 0.96149581 1620 P50395 GDI2 Rab GDP dissociation inhibitor beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.33 0.471 2 1 1 1 1 66.899 61.316 3 0.00028216 75924 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 55.885 43.093 40071000 24685000 12836000 2549900 0 0 0 0 0 0 0 0 0 0 0 0 60302 1620 54244 509393;509394;509395 404446;404447;404448 404448 2 YIAPTVLTDVDPK Unmodified 1430.7657 0.76569654 1665 P51648 ALDH3A2 Fatty aldehyde dehydrogenase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.363 77.42 2 0.0017562 89267 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 61.815 51.229 103690000 0 0 0 15857000 6531400 6475900 7675100 7513000 5912900 9216600 6888700 13477000 6817800 8359800 8968300 60303 1665 54245 509396;509397;509398;509399;509400;509401;509402;509403;509404;509405;509406;509407 404449;404450;404451;404452;404453;404454;404455;404456;404457;404458;404459;404460 404451 12 YIASVQGSTPSPR Unmodified 1361.6939 0.69392858 1601 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.103 39.283 2 1.7288E-41 43338 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 173.32 153.02 198680000 0 0 0 13834000 10159000 13916000 15398000 18225000 10736000 17345000 20535000 21035000 23451000 14381000 19663000 60304 1601 54246 509408;509409;509410;509411;509412;509413;509414;509415;509416;509417;509418;509419 404461;404462;404463;404464;404465;404466;404467;404468;404469;404470;404471;404472 404466 12 YIATDFTLK Unmodified 1070.5648 0.56481189 375 O43847 NRD1 Nardilysin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 1 4 1 75.727 70.826 1;2 0.015802 88853 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 147.19 88.268 629790000 41114000 559970000 28704000 0 0 0 0 0 0 0 0 0 0 0 0 60305 375 54247 509420;509421;509422;509423;509424;509425 404473;404474;404475;404476;404477;404478;404479;404480;404481 404477 8 YIATITDK Unmodified 923.4964 0.49639797 472;3250 Q8IWZ3;O75179 ANKHD1;ANKRD17 Ankyrin repeat and KH domain-containing protein 1;Ankyrin repeat domain-containing protein 17 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 34.658 34.791 2 0.011957 38085 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 75.738 39.151 256290000 0 0 0 13261000 12659000 19058000 19803000 19037000 15153000 24970000 33918000 0 25412000 24518000 48503000 60306 3250;472 54248 509426;509427;509428;509429;509430;509431;509432;509433;509434;509435;509436 404482;404483;404484;404485;404486;404487;404488;404489 404485 8 YICDNQDTISSK Unmodified 1442.6348 0.63475872 65 CON__P02769 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29.589 29.418 2 8.1073E-20 30965 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 188.04 82.52 + 557270000 0 42365000 0 51288000 76585000 20139000 29076000 23394000 30592000 67001000 78127000 44284000 33021000 27050000 34352000 60307 65 54249 509437;509438;509439;509440;509441;509442;509443;509444;509445;509446;509447;509448;509449;509450 404490;404491;404492;404493;404494;404495;404496;404497;404498;404499;404500;404501 404493 12 YICENQDSISSK Unmodified 1442.6348 0.63475872 64 CON__P02768-1;P02768 ALB Serum albumin yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 28.571 28.755 2 4.6603E-11 31212 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 173.32 64.347 + 246820000 0 0 0 180630000 4409100 5875500 6117000 0 4154100 6021100 12111000 12665000 7181000 0 7663400 60308 64 54250 509451;509452;509453;509454;509455;509456;509457;509458;509459;509460;509461 404502;404503;404504;404505;404506;404507;404508;404509;404510;404511 404510 9 YICQKPSIQK Unmodified 1263.6645 0.66454271 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 1 By MS/MS 2 0 1 1 29.768 24.147 3 0.01777 34038 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.209 14.81 13848000 13848000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60309 3119 54251 509462 404512 404512 1 YIDDTVK Unmodified 852.4229 0.42289868 3631 Q92576 PHF3 PHD finger protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 22.118 21.654 2 0.023406 22748 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 86.866 17.434 225690000 0 38101000 0 12395000 9153200 13782000 15573000 14990000 13116000 19488000 25255000 24458000 17862000 0 21519000 60310 3631 54252 509463;509464;509465;509466;509467;509468;509469;509470;509471;509472;509473;509474;509475 404513;404514 404514 2 YIDENQDRYIK Unmodified 1455.6994 0.69940789 3910 Q96KP4 CNDP2 Cytosolic non-specific dipeptidase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.3 3.85 5 1 4 2 2 2 1 1 1 1 37.389 34.61 2;3 2.5315E-05 42697 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 113.63 103.58 303190000 23963000 186630000 37144000 0 0 0 0 0 0 0 11260000 12562000 0 6890000 24737000 60311 3910 54253 509476;509477;509478;509479;509480;509481;509482;509483;509484;509485 404515;404516;404517;404518;404519;404520;404521;404522;404523 404516 9 YIDNQVVSTK Unmodified 1165.5979 0.59790293 4392 Q9H467 CUEDC2 CUE domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.757 32.941 2 0.0070856 34780 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 76.221 34.792 127920000 0 0 0 5899400 4862800 7427300 8106700 6752000 5248100 14864000 14571000 15638000 8317600 10824000 25410000 60312 4392 54254 509486;509487;509488;509489;509490;509491;509492;509493;509494;509495;509496;509497 404524;404525;404526;404527;404528;404529;404530;404531 404530 8 YIDQEELNK Unmodified 1150.5506 0.55061839 862;850;2716 P07900;Q14568;P08238;Q58FF8 HSP90AA1;HSP90AA2P;HSP90AB1;HSP90AB2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.62 3.92 1 6 2 12 4 4 1 1 1 1 1 1 1 1 1 1 1 1 1 36.106 35.086 2 2.5659E-06 93709 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 167.24 103.68 42399000000 1870500000 16628000000 121450000 1001400000 818630000 2410200000 1170000000 1301000000 860880000 1969100000 2966400000 2750200000 1922800000 2191400000 4416800000 60313 850;862;2716 54255 509498;509499;509500;509501;509502;509503;509504;509505;509506;509507;509508;509509;509510;509511;509512;509513;509514;509515;509516;509517;509518 404532;404533;404534;404535;404536;404537;404538;404539;404540;404541;404542;404543;404544;404545;404546;404547;404548;404549;404550;404551;404552;404553;404554;404555;404556;404557;404558;404559;404560;404561;404562 404546 31 YIDSADLEPITSQEEPVR Unmodified 2060.9902 0.99022976 1061 P17812 CTPS1 CTP synthase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 75.377 75.372 2 2.7295E-38 86565 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 134.04 118.5 73930000 0 0 0 3241400 4157900 10544000 0 5115500 0 0 12447000 0 0 13010000 25414000 60314 1061 54256 509519;509520;509521;509522;509523;509524;509525 404563;404564;404565;404566;404567;404568;404569;404570 404564 8 YIDSADLEPITSQEEPVRYHEAWQK Unmodified 3003.425 0.42503053 1061 P17812 CTPS1 CTP synthase 1 yes yes 0 0 1 By MS/MS 2 0 2 2 81.125 72.995 3;4 1.6801E-37 95737 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 109.75 99.635 51224000 51224000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60315 1061 54257 509526;509527 404571;404572 404572 2 YIDTEHGGSQAR Unmodified 1332.6058 0.60584185 2536 Q15436 SEC23A Protein transport protein Sec23A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 2 2 2 1 2 2 1 2 2 2 2 10.268 10.406 2;3 0.010375 9429 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 34.532 28.497 124110000 0 0 0 5536200 5493700 9980100 9857500 5934400 4988600 12556000 1882400 18244000 12754000 11895000 24990000 60316 2536 54258 509528;509529;509530;509531;509532;509533;509534;509535;509536;509537;509538;509539;509540;509541;509542;509543;509544;509545;509546;509547;509548 404573;404574;404575;404576;404577;404578 404573 6 YIEEAIEK Unmodified 993.50188 0.50187728 1012 P15104 GLUL Glutamine synthetase yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 38.019 35.279 2 0.012186 40356 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 75.213 41.21 69574000 0 32290000 0 37285000 0 0 0 0 0 0 0 0 0 0 0 60317 1012 54259 509549;509550 404579;404580;404581 404581 3 YIEELESQVAQLK Unmodified 1548.8035 0.80353861 2835 Q5W0B1 RNF219 RING finger protein 219 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 82.055 77.35 2 1.6001E-08 96303 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.94 109.94 95973000 0 95973000 0 0 0 0 0 0 0 0 0 0 0 0 0 60318 2835 54260 509551;509552;509553 404582;404583;404584 404583 3 YIEERLHTLEEEK Unmodified 1687.8417 0.84171503 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 0 1 By MS/MS By MS/MS 2 0.816 1 1 1 2 1 75.031 72.422 3 0.0055362 95602 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 58.098 39.04 47844000 41479000 6365100 0 0 0 0 0 0 0 0 0 0 0 0 0 60319 5071 54261 509554;509555;509556 404585;404586;404587 404586 2 YIEGLSAESNSISK Unmodified 1496.7359 0.73585297 3143 Q86U86 PBRM1 Protein polybromo-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.61 2 5 1 1 1 1 1 1 1 54.266 53.17 2 7.2438E-10 67093 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 137.89 122.69 147550000 0 107220000 0 9858500 5306700 0 6832500 7037600 0 0 0 0 0 11300000 0 60320 3143 54262 509557;509558;509559;509560;509561;509562;509563 404588;404589;404590;404591;404592;404593;404594;404595;404596;404597;404598 404590 11 YIEIYVQK Unmodified 1054.5699 0.56989727 2040;1723 P53675;Q00610 CLTCL1;CLTC Clathrin heavy chain 2;Clathrin heavy chain 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.57 3.46 3 2 2 2 2 1 1 1 62.551 58.515 2 0.0031941 66627 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 101.69 62.028 78153000 32630000 33648000 2138100 0 3217900 0 0 0 0 6518600 0 0 0 0 0 60321 1723;2040 54263 509564;509565;509566;509567;509568;509569;509570 404599;404600;404601;404602;404603;404604;404605 404599 7 YIELLTR Unmodified 906.51747 0.51746776 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.439 63.532 2 0.019157 73613 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 110.63 56.108 1055900000 0 0 0 195500000 50878000 57489000 49298000 245020000 42412000 51189000 70731000 110450000 95309000 40508000 47157000 60322 1029 54264 509571;509572;509573;509574;509575;509576;509577;509578;509579;509580;509581;509582 404606;404607;404608 404607 3 YIENMSR Unmodified 911.4171 0.41710179 3244 Q8IWS0 PHF6 PHD finger protein 6 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.224 22.429 2 0.049926 23391 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 63.287 42.805 82445000 0 0 0 3123600 2642500 5108600 3506600 4316400 4066100 8045800 9358300 14060000 7442600 5639000 15136000 60323 3244 54265 509583;509584;509585;509586;509587;509588;509589;509590;509591;509592;509593;509594 404609 404609 1 YIENMSRGIYK Unmodified 1372.6809 0.68092105 3244 Q8IWS0 PHF6 PHD finger protein 6 yes yes 0 0 1 By MS/MS 2 0 1 1 52.409 44.394 3 0.00029373 61266 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.474 52.557 59821000 59821000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60324 3244 54266 509595 404610;404611 404611 2 YIESLAR Unmodified 850.45487 0.45486751 3094 Q7Z460 CLASP1 CLIP-associating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 34.755 34.941 2 0.038679 37329 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 69.383 9.7425 105840000 0 0 0 4436400 5734300 10631000 7412900 6980400 0 11700000 9269100 13662000 12518000 9600700 13890000 60325 3094 54267 509596;509597;509598;509599;509600;509601;509602;509603;509604;509605;509606 404612 404612 1 YIESPDVEK Unmodified 1078.5183 0.51825563 2547 Q15545 TAF7 Transcription initiation factor TFIID subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 32.713 32.68 2 0.005211 35876 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 80.165 53.035 23972000 0 0 0 0 6476600 6672300 0 4997700 5825700 0 0 0 0 0 0 60326 2547 54268 509607;509608;509609;509610;509611;509612;509613;509614 404613;404614;404615;404616;404617;404618;404619;404620 404613 8 YIESPVLFLR Unmodified 1235.6914 0.69140938 2384 Q14166 TTLL12 Tubulin--tyrosine ligase-like protein 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 87.342 87.477 2 0.0018939 101089 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 100.15 80.362 23879000 0 0 0 0 0 3941500 0 984320 0 4004500 2018200 2780700 0 2516900 7633000 60327 2384 54269 509615;509616;509617;509618;509619;509620;509621 404621;404622;404623;404624;404625 404623 5 YIESPVLFLREDVGK Unmodified 1763.9458 0.94578617 2384 Q14166 TTLL12 Tubulin--tyrosine ligase-like protein 12 yes yes 0 0 1 By MS/MS By MS/MS 2.67 0.471 1 2 2 1 90.487 85.522 3 0.00027455 109109 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.444 78.652 32926000 29851000 3075000 0 0 0 0 0 0 0 0 0 0 0 0 0 60328 2384 54270 509622;509623;509624 404626;404627 404627 2 YIETELK Unmodified 894.46985 0.46984887 4761 Q9NZ63 C9orf78 Uncharacterized protein C9orf78 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 38.84 34.018 2 0.027725 44457 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.071 21.76 200710000 0 200710000 0 0 0 0 0 0 0 0 0 0 0 0 0 60329 4761 54271 509625;509626 404628;404629 404629 2 YIETSELCGGAR Unmodified 1354.6187 0.61871473 154 O00429 DNM1L Dynamin-1-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 43.757 44.014 2 0.011279 48255 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.398 29.711 5891100 0 0 0 0 0 0 0 0 0 0 0 0 0 5891100 0 60330 154 54272 509627;509628;509629 404630;404631;404632 404630 3 YIETTPLTIK Unmodified 1177.6594 0.65944055 2456 Q14966 ZNF638 Zinc finger protein 638 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.032 65.12 2 0.019298 73897 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.859 43.189 143630000 0 0 0 6299900 8103200 9502300 9073300 10386000 7735600 11542000 13611000 17124000 12652000 15691000 21909000 60331 2456 54273 509630;509631;509632;509633;509634;509635;509636;509637;509638;509639;509640;509641 404633 404633 1 YIFASLDQK Unmodified 1083.5601 0.56006086 2193 Q12802 AKAP13 A-kinase anchor protein 13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 5.2 3.92 3 2 2 1 1 1 73.13 67.825 2 0.0024174 88802 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 117.4 52.595 48778000 25444000 17047000 0 0 0 0 0 0 0 0 0 0 0 6286800 0 60332 2193 54274 509642;509643;509644;509645;509646 404634;404635;404636;404637 404636 4 YIFPLDDK Unmodified 1009.512 0.51204804 4969 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 74.83 74.487 2 0.012186 85791 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 75.213 47.106 78197000 0 25735000 0 3402300 3316300 3516500 4327900 3445600 0 5851500 5216600 4036100 6353800 4827600 8167600 60333 4969 54275 509647;509648;509649;509650;509651;509652;509653;509654;509655;509656;509657;509658 404638;404639;404640;404641;404642;404643;404644;404645;404646;404647 404638 10 YIFPTLDK Unmodified 995.53278 0.53278348 3693 Q92974 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76.409 75.427 2 0.0087284 87189 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 85.212 32.529 516940000 40990000 95195000 8203500 12852000 16801000 36074000 21257000 31115000 33162000 31012000 34296000 36902000 30633000 26031000 62416000 60334 3693 54276 509659;509660;509661;509662;509663;509664;509665;509666;509667;509668;509669;509670;509671;509672;509673 404648;404649;404650;404651;404652;404653;404654;404655;404656;404657;404658;404659;404660;404661;404662 404662 15 YIGESAR Unmodified 794.39227 0.39226725 1898 P62333 PSMC6 26S protease regulatory subunit 10B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 13.187 13.367 2 0.030787 12501 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 74.415 24.296 191200000 0 0 0 0 13610000 18474000 7674900 5341000 4799000 33544000 32838000 39993000 7085100 6986000 20849000 60335 1898 54277 509674;509675;509676;509677;509678;509679;509680;509681;509682;509683;509684 404663 404663 1 YIGFETVNGDIFICTQK Unmodified 2003.9663 0.96626362 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 92.583 86.755 2 3.2523E-63 110620 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 204.48 189.09 28849000 28849000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60336 4819 54278 509685;509686 404664;404665;404666 404666 3 YIGSVEEAEK Unmodified 1123.5397 0.53971935 408 O60508 CDC40 Pre-mRNA-processing factor 17 yes yes 0 0 0 By MS/MS 2 0 1 1 33.886 29.242 2 0.0053747 38196 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.862 66.225 60819000 0 60819000 0 0 0 0 0 0 0 0 0 0 0 0 0 60337 408 54279 509687 404667 404667 1 YIGTGHADTTK Unmodified 1162.5619 0.56185177 4212 Q9BWJ5 SF3B5 Splicing factor 3B subunit 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.43 3.14 5 1 24 1 3 2 2 2 2 2 2 2 2 2 2 2 2 2 10.158 9.6463 2;3 2.9398E-07 12329 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.97 106.87 1783800000 141110000 863640000 209700000 17665000 22251000 30226000 35619000 30251000 24338000 31749000 101950000 72473000 53572000 51324000 97961000 60338 4212 54280 509688;509689;509690;509691;509692;509693;509694;509695;509696;509697;509698;509699;509700;509701;509702;509703;509704;509705;509706;509707;509708;509709;509710;509711;509712;509713;509714;509715;509716;509717 404668;404669;404670;404671;404672;404673;404674;404675;404676;404677;404678;404679;404680;404681;404682;404683;404684;404685;404686;404687;404688;404689;404690;404691;404692 404671 17 YIHPDDELVLEDELQRIK Unmodified 2224.1376 0.1375627 1556 P49005 POLD2 DNA polymerase delta subunit 2 yes yes 0 0 1 By MS/MS By MS/MS 2.67 0.471 2 4 3 3 87.793 83.358 3;4 4.4643E-11 99978 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 106.35 86.805 140940000 94794000 46143000 0 0 0 0 0 0 0 0 0 0 0 0 0 60339 1556 54281 509718;509719;509720;509721;509722;509723 404693;404694;404695;404696;404697 404695 4 YIIEELNVR Unmodified 1147.6237 0.62372375 1441 P41252 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 73.924 73.985 2 0.0071238 84365 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 73.26 9.695 78314000 0 0 0 2783400 3708400 9726400 2782300 2356400 3741600 8539700 9673800 12316000 4246000 7585900 10854000 60340 1441 54282 509724;509725;509726;509727;509728;509729;509730;509731;509732;509733;509734;509735 404698;404699;404700;404701;404702;404703;404704;404705 404703 8 YIIEELNVRK Unmodified 1275.7187 0.71868677 1441 P41252 IARS Isoleucine--tRNA ligase, cytoplasmic yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 4 24 2 1 1 2 2 2 2 2 2 2 2 2 2 2 2 62.734 61.888 2;3 0.00019914 84630 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 133.58 84.164 562870000 221340000 17132000 8829900 9409900 10952000 35693000 18418000 20650000 22477000 27277000 28020000 35766000 22673000 26568000 57662000 60341 1441 54283 509736;509737;509738;509739;509740;509741;509742;509743;509744;509745;509746;509747;509748;509749;509750;509751;509752;509753;509754;509755;509756;509757;509758;509759;509760;509761;509762;509763 404706;404707;404708;404709;404710;404711;404712;404713;404714;404715;404716;404717;404718;404719;404720 404713 14 YIIIGDMGVGK Oxidation (M) 1180.6162 0.61619553 1834 P61106 RAB14 Ras-related protein Rab-14 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 63.904 63.164 2 0.00034839 72376 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 82.287 54.762 72176000 0 0 3646300 0 13995000 15300000 19455000 0 0 0 0 19778000 0 0 0 60342 1834 54284 509764;509765;509766;509767;509768 404721;404722;404723;404724;404725;404726;404727 404722 2974 7 YIIIGDMGVGK Unmodified 1164.6213 0.62128091 1834 P61106 RAB14 Ras-related protein Rab-14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.46 1.87 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 77.915 77.711 2 0.0044544 90066 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 72.643 57.805 193160000 0 3226800 0 7723000 9319700 16785000 9921200 22097000 8935100 17399000 16636000 21708000 10643000 17214000 31554000 60343 1834 54284 509769;509770;509771;509772;509773;509774;509775;509776;509777;509778;509779;509780;509781 404728;404729;404730;404731;404732;404733;404734;404735;404736;404737;404738;404739;404740 404737 13 YIIIGDTGVGK Unmodified 1134.6285 0.62847478 1828 P61019;Q8WUD1 RAB2A;RAB2B Ras-related protein Rab-2A;Ras-related protein Rab-2B yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 66.771 65.384 2 0.0029697 75190 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 102.07 58.259 502940000 16785000 101080000 9607000 14933000 0 23179000 26372000 37928000 17678000 41247000 40546000 44846000 30902000 32036000 65798000 60344 1828 54285 509782;509783;509784;509785;509786;509787;509788;509789;509790;509791;509792;509793;509794;509795;509796 404741;404742;404743;404744;404745;404746;404747;404748;404749;404750;404751;404752;404753 404741 4 YILAATLDNTLK Unmodified 1334.7446 0.74456717 1865 P61964 WDR5 WD repeat-containing protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 81.446 80.796 2 1.9205E-08 92859 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 135.55 110.71 276510000 0 110240000 24589000 2736800 5987500 8062600 7364900 8412000 8604600 22936000 13775000 15314000 7142600 12638000 28711000 60345 1865 54286 509797;509798;509799;509800;509801;509802;509803;509804;509805;509806;509807;509808;509809;509810;509811 404754;404755;404756;404757;404758;404759;404760;404761;404762;404763;404764;404765;404766;404767;404768;404769;404770;404771 404758 16 YILAEPDPHAPDPEK Unmodified 1690.8203 0.82025131 4846 Q9UBL3 ASH2L Set1/Ash2 histone methyltransferase complex subunit ASH2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 56.803 56.878 3 0.00080554 64569 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 57.148 48.833 270250000 0 0 0 12491000 19733000 21141000 14213000 32257000 14845000 25385000 34896000 34913000 26486000 33885000 0 60346 4846 54287 509812;509813;509814;509815;509816;509817;509818;509819;509820;509821;509822 404772;404773;404774;404775;404776;404777;404778;404779;404780;404781;404782;404783;404784;404785;404786;404787;404788;404789;404790;404791;404792 404783 19 YILPDEPAIIVHPNWAAK Unmodified 2046.0938 0.093847391 3255 Q8IX12 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 86.104 86.285 3 1.2315E-05 99916 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.085 65.876 12603000 0 0 0 0 0 0 0 1512300 0 0 0 0 0 0 11090000 60347 3255 54288 509823;509824 404793;404794 404794 2 YILPTLEK Unmodified 975.56408 0.56408361 4449 Q9H8G2 CAAP1 Caspase activity and apoptosis inhibitor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72.541 71.549 2 0.018722 81964 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.207 24.561 167910000 5607300 88813000 1648500 4026500 4570000 4274800 4889500 4826900 3964800 6624300 6916100 8739800 6330500 6584100 10093000 60348 4449 54289 509825;509826;509827;509828;509829;509830;509831;509832;509833;509834;509835;509836;509837;509838;509839 404795;404796;404797;404798;404799;404800 404800 6 YILVTGGVISGIGK Unmodified 1375.8075 0.80750177 1061;4598 P17812;Q9NRF8 CTPS1;CTPS2 CTP synthase 1;CTP synthase 2 no no 0 0 0 By MS/MS 2 0 1 1 88.469 80.339 2 0.0020983 104461 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.069 44.64 11742000 11742000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60349 1061;4598 54290 509840 404801 404801 1 YIMLNPSSR Oxidation (M) 1095.5383 0.53827956 945 P11387 TOP1 DNA topoisomerase 1 yes yes 0 1 0 By MS/MS By matching 10 0 2 1 1 42.798 42.911 2 0.0076523 48262 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 62.546 43.764 5300300 0 0 0 0 0 0 2963800 0 0 2336500 0 0 0 0 0 60350 945 54291 509841;509842 404802 404802 1224 1 YIMLNPSSR Unmodified 1079.5434 0.54336494 945 P11387 TOP1 DNA topoisomerase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 52.834 52.983 2 0.042904 60796 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 43.808 20.879 74257000 0 0 0 2351300 2595400 0 3160400 3743600 3343200 0 11025000 15144000 8571600 5176200 19146000 60351 945 54291 509843;509844;509845;509846;509847;509848;509849;509850;509851;509852 404803 404803 1 YIMSYISR Unmodified 1031.511 0.51100218 2215 Q12965 MYO1E Unconventional myosin-Ie yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 61.49 61.142 2 0.032702 70262 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 54.157 37.602 7252600 0 0 0 2507700 2887100 0 0 0 1857700 0 0 0 0 0 0 60352 2215 54292 509853;509854;509855 404804 404804 1 YINENLIVNTDELGR Unmodified 1761.8897 0.88972785 1067 P17987 TCP1 T-complex protein 1 subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By matching 10 0 3 1 1 1 78.748 78.901 2 9.1051E-10 90356 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 118.87 101.06 34369000 0 0 0 0 0 0 0 0 0 6683700 0 0 0 9552500 18133000 60353 1067 54293 509856;509857;509858 404805;404806 404806 2 YINPAATK Unmodified 876.47052 0.47051757 2274 Q13356 PPIL2 Peptidyl-prolyl cis-trans isomerase-like 2 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 22.92 23.16 2 0.021 23793 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 62.338 35.859 44349000 0 0 0 0 2180900 2198600 2968100 2404300 1547700 3548100 6214600 7437600 4307600 4728500 6813000 60354 2274 54294 509859;509860;509861;509862;509863;509864;509865;509866;509867;509868;509869 404807 404807 1 YINRDYSK Unmodified 1057.5193 0.51925868 159 O00469 PLOD2 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 13.916 10.751 2 0.015421 15922 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 121.67 28.111 129240000 121330000 0 7906500 0 0 0 0 0 0 0 0 0 0 0 0 60355 159 54295 509870;509871 404808 404808 1 YINTEHGGSQAR Unmodified 1331.6218 0.62182627 2537 Q15437 SEC23B Protein transport protein Sec23B yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 7.9841 8.111 3 0.0017414 5620 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.555 47.706 116520000 0 0 0 7262600 4093400 7030600 5315600 5808800 4847300 7056200 26283000 17874000 7357300 7890900 15698000 60356 2537 54296 509872;509873;509874;509875;509876;509877;509878;509879;509880;509881;509882;509883 404809;404810;404811;404812 404810 4 YIPLPQR Unmodified 885.50724 0.50723743 3576 Q8WWM7 ATXN2L Ataxin-2-like protein yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 48.949 49.107 2 0.038665 54257 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.39 50.584 221890000 0 0 0 9988100 12829000 12855000 14957000 12894000 0 20703000 22339000 28529000 24565000 22905000 39327000 60357 3576 54297 509884;509885;509886;509887;509888;509889;509890;509891;509892;509893;509894 404813;404814;404815;404816 404815 4 YIPNISMCLK Unmodified 1237.6199 0.6199007 1463 P42695 NCAPD3 Condensin-2 complex subunit D3 yes yes 0 0 0 By MS/MS 2 0 1 1 82.781 78.076 2 0.023918 97121 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.954 44.06 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60358 1463 54298 509895 404817 404817 1 YIPNRGPLDK Unmodified 1171.635 0.63495714 1220 P27635 RPL10 60S ribosomal protein L10 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 31.67 31.856 3 0.0047393 34541 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 51.436 19.942 1513300000 0 0 0 70252000 87384000 89122000 114220000 88397000 94317000 149030000 140080000 211020000 152320000 127540000 189660000 60359 1220 54299 509896;509897;509898;509899;509900;509901;509902;509903;509904;509905;509906;509907 404818;404819;404820;404821;404822;404823;404824;404825;404826;404827;404828 404822 6 YIPVEDLQDPR Unmodified 1343.6721 0.67213051 245 O15047 SETD1A Histone-lysine N-methyltransferase SETD1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 63.549 63.73 2 0.041545 73349 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 36.585 21.434 83557000 0 0 0 0 7361700 0 5582800 7234100 8876800 8077400 9791600 9014800 6686400 7730000 13202000 60360 245 54300 509908;509909;509910;509911;509912;509913;509914;509915;509916;509917 404829;404830 404829 2 YIQAACK Unmodified 852.41637 0.41637351 2040;1723 P53675;Q00610 CLTCL1;CLTC Clathrin heavy chain 2;Clathrin heavy chain 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.17 3.18 1 2 9 1 2 1 1 1 1 1 1 1 1 1 12.025 11.226 2 0.029482 11046 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 94.669 56.467 1515700000 4516600 1454000000 0 4117000 2864000 4937300 0 4221200 0 4561500 0 8777900 4797500 5442800 17525000 60361 1723;2040 54301 509918;509919;509920;509921;509922;509923;509924;509925;509926;509927;509928;509929 404831;404832;404833;404834;404835;404836;404837;404838 404835 8 YIQAEPPTNK Unmodified 1159.5873 0.58733824 3475 Q8TAQ2 SMARCC2 SWI/SNF complex subunit SMARCC2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.31 3.1 1 2 10 1 2 1 1 1 1 1 1 1 1 1 1 28.979 28.107 2 6.8762E-06 34928 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 143.28 97.567 313440000 149040 86338000 0 16631000 0 20907000 15917000 13724000 0 25653000 29250000 23362000 26309000 20869000 34328000 60362 3475 54302 509930;509931;509932;509933;509934;509935;509936;509937;509938;509939;509940;509941;509942 404839;404840;404841;404842;404843;404844;404845;404846;404847;404848;404849;404850 404841 10 YIQDFQR Unmodified 968.47158 0.4715802 1053 P17480 UBTF Nucleolar transcription factor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.404 34.587 2 0.025671 36803 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 80.294 59.84 817370000 0 0 0 43986000 43878000 72013000 37130000 38484000 35148000 61650000 158120000 144180000 60759000 52505000 69516000 60363 1053 54303 509943;509944;509945;509946;509947;509948;509949;509950;509951;509952;509953;509954 404851;404852 404851 2 YIQDFQREK Unmodified 1225.6091 0.60913632 1053 P17480 UBTF Nucleolar transcription factor 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 27.982 27.757 3 0.012497 29261 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.235 39.26 102150000 0 0 46689000 3737300 4160400 0 9281100 5218900 8667100 0 9078800 9284400 6032100 0 0 60364 1053 54304 509955;509956;509957;509958;509959;509960;509961;509962;509963 404853;404854 404854 1 YIQHTYR Unmodified 979.48756 0.48756462 1689 P52565 ARHGDIA Rho GDP-dissociation inhibitor 1 yes yes 0 0 0 By matching By matching By matching By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 11.272 11.515 2 0.020873 9571 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.66 78.085 15477000 0 0 0 0 0 0 0 567940 0 974180 0 2955700 954250 2634900 7390000 60365 1689 54305 509964;509965;509966;509967;509968;509969 404855 404855 1 YIQHTYRK Unmodified 1107.5825 0.58252764 1689 P52565 ARHGDIA Rho GDP-dissociation inhibitor 1 yes yes 0 0 1 By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 6.8063 6.9257 2 0.042906 4337 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.59 57.467 27524000 0 0 0 1394300 484210 749310 0 1211600 1422600 0 3599200 1695800 0 4024700 12942000 60366 1689 54306 509970;509971;509972;509973;509974;509975;509976;509977;509978 404856 404856 1 YIQPWESEFIDSQR Unmodified 1796.837 0.836964 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 2 1 1 1 1 1 82.618 82.763 2;3 0.0017152 95478 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.102 45.633 34911000 0 0 0 0 0 2297700 0 6798200 1579100 7143100 2136100 0 2900600 0 12056000 60367 2930 54307 509979;509980;509981;509982;509983;509984;509985;509986 404857;404858 404858 2 YIQSMMEQK Oxidation (M) 1172.5206 0.52058059 5319 yes yes 0 1 0 By MS/MS 1 0 1 1 107.56 112.82 2 0.017191 93735 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 76.035 22.48 + 35533000 35533000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60368 5319 54308 509987 404859 404859 6715;6716 1 YISAAPGAEAK Unmodified 1076.5502 0.55022446 2425;3479 Q14671;Q8TB72 PUM1;PUM2 Pumilio homolog 1;Pumilio homolog 2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 25.745 25.945 2 0.00027278 27453 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 92.445 61.941 469290000 0 0 0 28267000 31764000 33008000 37185000 38712000 33317000 41276000 34101000 53260000 40212000 35313000 62879000 60369 2425;3479 54309 509988;509989;509990;509991;509992;509993;509994;509995;509996;509997;509998;509999 404860;404861;404862;404863;404864;404865;404866;404867;404868;404869;404870;404871;404872;404873;404874 404868 15 YISENESPRPSQK Unmodified 1533.7423 0.74233534 584 O94782 USP1 Ubiquitin carboxyl-terminal hydrolase 1 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 3 9 1 1 1 1 1 1 1 1 1 1 1 1 19.149 18.383 3 0.010063 23033 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 51.211 39.045 67358000 4264200 9013500 11891000 4446100 0 0 2621700 3830800 0 6286200 4385700 6491200 4464100 3425200 6238000 60370 584 54310 510000;510001;510002;510003;510004;510005;510006;510007;510008;510009;510010;510011 404875;404876;404877;404878 404877 4 YISKPENLK Unmodified 1090.6023 0.60226003 5140 Q9Y376;Q9H9S4 CAB39;CAB39L Calcium-binding protein 39;Calcium-binding protein 39-like yes no 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 28.292 23.965 2 0.0057198 33968 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 138.4 68.397 77863000 50688000 17251000 9923200 0 0 0 0 0 0 0 0 0 0 0 0 60371 5140 54311 510012;510013;510014 404879 404879 0 YISLIYTNYEAGK Unmodified 1533.7715 0.7715102 879 P09211 GSTP1 Glutathione S-transferase P yes yes 0 0 0 By MS/MS 10 0 1 1 78.519 78.067 2 0.03578 90569 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 33.229 12.359 6665700 0 0 0 6665700 0 0 0 0 0 0 0 0 0 0 0 60372 879 54312 510015 404880 404880 1 YISPDQLADLYK Unmodified 1424.7187 0.71874635 827 P06733 ENO1 Alpha-enolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.24 3.75 5 1 11 2 2 2 1 1 1 1 1 1 1 1 1 1 1 82.567 81.795 2 3.7345E-15 94966 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 157.24 142.95 2763500000 25876000 16195000 7275100 53710000 16087000 23834000 12162000 0 11689000 34665000 313810000 398750000 17666000 294040000 1537800000 60373 827 54313 510016;510017;510018;510019;510020;510021;510022;510023;510024;510025;510026;510027;510028;510029;510030;510031;510032 404881;404882;404883;404884;404885;404886;404887;404888;404889;404890;404891;404892;404893;404894;404895;404896;404897;404898;404899;404900 404896 19 YISQCIDEIK Unmodified 1267.6118 0.61183843 193 O14617 AP3D1 AP-3 complex subunit delta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 54.087 54.407 2 0.0011361 60687 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 109.48 78.106 134810000 0 0 0 0 0 12634000 0 0 8120300 16833000 15968000 26254000 15273000 14326000 25400000 60374 193 54314 510033;510034;510035;510036;510037;510038;510039;510040 404901;404902;404903;404904;404905;404906;404907;404908;404909;404910 404906 10 YISSQIERPIR Unmodified 1360.7463 0.7462985 528 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 1 2 2 2 2 1 1 2 2 2 2 2 42.621 42.833 2;3 4.6455E-05 46836 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 107.83 86.602 488160000 0 0 0 13154000 26326000 41022000 27362000 43956000 19294000 40517000 44250000 95086000 38167000 29340000 69688000 60375 528 54315 510041;510042;510043;510044;510045;510046;510047;510048;510049;510050;510051;510052;510053;510054;510055;510056;510057;510058;510059;510060;510061 404911;404912;404913;404914;404915;404916;404917 404913 6 YITAHGLPPTASALGPGPPPPEPLPGSGPR Unmodified 2900.5185 0.5184774 2592 Q15906 VPS72 Vacuolar protein sorting-associated protein 72 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 80.023 80.153 3 7.7769E-12 92464 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 44.264 37.389 25495000 0 0 0 0 0 4094500 0 4491500 0 5241200 5793300 5874700 0 0 0 60376 2592 54316 510062;510063;510064;510065;510066 404918;404919;404920;404921;404922 404921 5 YITASTFAQAR Unmodified 1227.6248 0.62478638 4026 Q99575 POP1 Ribonucleases P/MRP protein subunit POP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 54.796 54.811 2 0.0029713 62018 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 65.224 43.264 86912000 0 0 0 6786600 8102100 8124000 10758000 9418200 5662800 10446000 0 0 0 0 27615000 60377 4026 54317 510067;510068;510069;510070;510071;510072;510073;510074 404923;404924;404925;404926 404923 4 YITEADSK Unmodified 925.43928 0.43927702 2224 Q13017 ARHGAP5 Rho GTPase-activating protein 5 yes yes 0 0 0 By MS/MS 2 0 1 1 14.422 11.107 2 0.016257 14956 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.47 68.498 13998000 0 13998000 0 0 0 0 0 0 0 0 0 0 0 0 0 60378 2224 54318 510075 404927 404927 1 YITHESDDAR Unmodified 1205.5313 0.53127993 4273;587 O94806;Q9BZL6 PRKD3;PRKD2 Serine/threonine-protein kinase D3;Serine/threonine-protein kinase D2 no no 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 16 1 1 1 2 2 2 1 2 2 2 9.0786 9.2185 2;3 0.017597 6468 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 56.359 46.672 60686000 0 0 0 4992700 3937800 5281900 6836200 0 4446100 6172100 0 3743600 11444000 6105800 7726300 60379 587;4273 54319 510076;510077;510078;510079;510080;510081;510082;510083;510084;510085;510086;510087;510088;510089;510090;510091 404928;404929;404930 404930 2 YITNLEVK Unmodified 978.5386 0.53859714 4339 Q9H0U9 TSPYL1 Testis-specific Y-encoded-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 49.823 49.987 2 0.013245 56243 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 72.789 26.419 123210000 0 0 0 7315200 8418000 0 9407000 7663300 6082500 14037000 16894000 16519000 9112300 12000000 15765000 60380 4339 54320 510092;510093;510094;510095;510096;510097;510098;510099;510100;510101;510102 404931;404932;404933;404934;404935;404936;404937;404938;404939;404940 404936 10 YITQNGDYQLR Unmodified 1369.6626 0.66262845 4232 Q9BXS5 AP1M1 AP-1 complex subunit mu-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 45.998 46.166 2 0.00029665 50893 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 123.35 82.368 134140000 0 0 0 7093200 3949900 14950000 8632700 0 6092400 11232000 14012000 18705000 10705000 12221000 26551000 60381 4232 54321 510103;510104;510105;510106;510107;510108;510109;510110;510111;510112;510113 404941;404942;404943;404944;404945;404946;404947;404948;404949;404950;404951;404952 404945 11 YIVAYHAAGK Unmodified 1091.5764 0.57637963 3950 Q96PZ0 PUS7 Pseudouridylate synthase 7 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.22 3.33 2 7 1 1 1 1 1 1 1 1 1 32.551 32.428 2 0.0017284 34074 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.046 67.365 46634000 0 0 12069000 0 0 0 2525400 1826100 2328500 3128200 5237500 9399500 0 0 10119000 60382 3950 54322 510114;510115;510116;510117;510118;510119;510120;510121;510122 404953;404954;404955;404956;404957;404958;404959;404960 404955 8 YIVLTSK Unmodified 822.48511 0.485105 4153 Q9BTY2 FUCA2 Plasma alpha-L-fucosidase yes yes 0 0 0 By MS/MS 2 0 1 1 46.05 39.058 2 0.039422 53597 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.297 39.795 20864000 20864000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60383 4153 54323 510123 404961;404962 404961 2 YIVPMLTVDGK Unmodified 1234.6631 0.66314572 999 P14550 AKR1A1 Alcohol dehydrogenase [NADP(+)] yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 82.125 82.324 2 0.0079576 94864 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.725 32.205 17130000 0 0 0 0 0 0 0 0 0 0 2282200 0 0 0 14848000 60384 999 54324 510124;510125 404963 404963 1 YIVQVSPLGIR Unmodified 1243.7289 0.72885752 2179 Q10570 CPSF1 Cleavage and polyadenylation specificity factor subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.189 80.248 2 0.0052329 92778 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 69.954 50.859 52829000 0 0 0 1417600 2596500 3685900 2531100 3317200 2865100 6107100 4762400 6359300 3317200 4839900 11029000 60385 2179 54325 510126;510127;510128;510129;510130;510131;510132;510133;510134;510135;510136;510137 404964;404965;404966;404967;404968;404969;404970;404971;404972;404973 404964 10 YIVTCAVVQK Unmodified 1179.6322 0.63217995 1671 P51808 DYNLT3 Dynein light chain Tctex-type 3 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 56.9 49.89 2 0.031534 67810 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.598 44.704 102600000 12106000 90495000 0 0 0 0 0 0 0 0 0 0 0 0 0 60386 1671 54326 510138;510139 404974 404974 1 YIVTGSGDK Unmodified 938.47091 0.4709115 2104;2103;2105 Q04725;Q04724;Q04726;Q04727 TLE2;TLE1;TLE3;TLE4 Transducin-like enhancer protein 2;Transducin-like enhancer protein 1;Transducin-like enhancer protein 3;Transducin-like enhancer protein 4 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.28 19.516 2 0.004955 18554 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 85.161 32.478 189210000 0 0 0 10419000 0 13227000 12246000 13814000 12977000 22920000 16273000 18841000 18923000 18691000 30884000 60387 2103;2104;2105 54327 510140;510141;510142;510143;510144;510145;510146;510147;510148;510149;510150;510151 404975;404976;404977;404978;404979;404980;404981;404982;404983;404984;404985 404981 11 YIYIMGIQER Oxidation (M) 1300.6486 0.64855829 1154 P23368 ME2 NAD-dependent malic enzyme, mitochondrial yes yes 0 1 0 By MS/MS By MS/MS 10 0 2 1 1 66.17 66.22 2 0.026357 76027 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 56.563 33.209 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60388 1154 54328 510152;510153 404986;404987 404986 2 YIYIMGIQER Unmodified 1284.6536 0.65364367 1154 P23368 ME2 NAD-dependent malic enzyme, mitochondrial yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 78.208 78.295 2 0.01226 90276 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 60.973 37.902 47003000 0 0 0 0 4017500 5881800 3336200 6472900 6583800 0 8238200 12473000 0 0 0 60389 1154 54328 510154;510155;510156;510157;510158;510159;510160 404988;404989;404990;404991;404992;404993 404988 6 YIYYLITK Unmodified 1075.5954 0.59538373 5217 Q9Y530 OARD1 O-acetyl-ADP-ribose deacetylase 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 74.968 75.062 2 0.027721 86640 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 57.177 42.663 33248000 0 0 0 0 2187300 4268900 3306300 2204300 2619100 4149600 4181700 6321200 1855400 2153900 0 60390 5217 54329 510161;510162;510163;510164;510165;510166;510167;510168;510169;510170 404994 404994 1 YKAEDEVQRER Unmodified 1421.6899 0.68990583 908 P0DMV9;P0DMV8 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 0 0 2 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 13.247 13.402 3 0.0035258 11876 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 85.813 72.134 486700000 0 0 0 30864000 18102000 10878000 32132000 17649000 12942000 21942000 60237000 95952000 41274000 46071000 98660000 60391 908 54330 510171;510172;510173;510174;510175;510176;510177;510178;510179;510180;510181;510182 404995;404996;404997;404998;404999;405000;405001 404999 1 YKEETIEK Unmodified 1038.5233 0.523341 1843 P61254 RPL26 60S ribosomal protein L26 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 12.228 11.802 2 0.013446 10889 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 133.13 90.011 554050000 0 138910000 0 29185000 35971000 11534000 34195000 29381000 17814000 42778000 0 70676000 48110000 42499000 53005000 60392 1843 54331 510183;510184;510185;510186;510187;510188;510189;510190;510191;510192;510193;510194;510195 405002;405003;405004 405002 0 YKLDEDEDEDDADLSK Unmodified 1898.7905 0.7905269 627 O95218 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS 5.73 3.91 5 1 5 2 3 1 1 1 1 1 1 43.562 40.336 2;3 1.355E-44 51937 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 157.38 141.13 304180000 119410000 158800000 2753200 0 0 4270400 0 0 0 0 0 9084800 2953400 0 6902300 60393 627 54332 510196;510197;510198;510199;510200;510201;510202;510203;510204;510205;510206 405005;405006;405007;405008;405009;405010;405011;405012;405013;405014;405015;405016;405017 405007 13 YKPAVNQIECHPYLTQEK Unmodified 2217.0888 0.088838367 1013 P15121 AKR1B1 Aldose reductase yes yes 0 0 1 By MS/MS By MS/MS By matching By matching By MS/MS 6 4 3 3 2 1 1 1 1 56.765 53.588 3;4 3.571E-36 73617 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 128.26 119.16 663190000 627180000 0 8603700 0 0 0 0 0 0 0 3813900 0 0 5930500 17659000 60394 1013 54333 510207;510208;510209;510210;510211;510212 405018;405019;405020;405021;405022;405023 405022 6 YKPESEELTAER Unmodified 1450.694 0.69398816 838 P07237 P4HB Protein disulfide-isomerase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.611 29.803 3 7.9325E-06 30986 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 108.01 97.288 1395900000 0 0 0 61360000 39518000 41792000 37831000 57111000 32437000 61785000 219580000 195880000 72278000 106940000 469420000 60395 838 54334 510213;510214;510215;510216;510217;510218;510219;510220;510221;510222;510223;510224 405024;405025;405026;405027;405028;405029;405030;405031;405032;405033;405034;405035;405036;405037;405038 405028 14 YKPLNTTPNATK Unmodified 1346.7194 0.71941505 3955 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching By matching By matching 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 23.54 23.276 2;3 0.00025264 33932 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.088 59.223 100600000 30556000 0 0 3251300 3555200 0 5463700 6087200 1789800 7120900 8224700 9541800 9704900 5866600 9435200 60396 3955 54335 510225;510226;510227;510228;510229;510230;510231;510232;510233;510234;510235;510236 405039;405040 405039 1 YKPYEEALLQAEAPR Unmodified 1776.9046 0.90464964 2475 Q15020 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 69.266 69.524 3 0.0009868 79071 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 37.77 26.001 61525000 0 0 0 0 0 0 0 0 0 6366500 5799700 13139000 9926700 7559000 18734000 60397 2475 54336 510237;510238;510239;510240;510241;510242 405041;405042;405043;405044;405045;405046 405044 6 YKYEVEDFTGVYEEVDEEQYSK Unmodified 2748.1967 0.1966533 895 P09884 POLA1 DNA polymerase alpha catalytic subunit yes yes 0 0 1 By MS/MS 2 0 1 1 85.827 77.696 3 1.7949E-15 101321 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.981 71.507 29968000 29968000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60398 895 54337 510243 405047 405047 1 YKYPEGSDQER Unmodified 1370.6103 0.61025853 2150 Q08188 TGM3 Protein-glutamine gamma-glutamyltransferase E;Protein-glutamine gamma-glutamyltransferase E 50 kDa catalytic chain;Protein-glutamine gamma-glutamyltransferase E 27 kDa non-catalytic chain yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 17.879 18.034 3 4.641E-06 18371 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 122.51 117.01 99317000 0 0 0 23463000 4819600 1768100 4383900 26688000 1209900 6435600 6849500 14145000 6101500 3453200 0 60399 2150 54338 510244;510245;510246;510247;510248;510249;510250;510251;510252;510253;510254 405048;405049;405050;405051;405052;405053;405054 405053 6 YLAAGSSNAVK Unmodified 1079.5611 0.56112349 2728 Q5HYI8 RABL3 Rab-like protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 23.138 23.253 2 0.0064867 24950 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 56.432 35.911 29944000 0 0 0 1988000 2518200 3380500 1675500 2663000 2038200 3677900 3874500 0 4059000 4069500 0 60400 2728 54339 510255;510256;510257;510258;510259;510260;510261;510262;510263;510264 405055;405056;405057;405058;405059;405060;405061;405062;405063 405062 9 YLAAVNTGAIK Unmodified 1119.6288 0.62880913 3443 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.979 52.126 2 0.00051801 58133 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 82.645 47.289 187270000 0 0 0 10725000 13087000 11015000 12650000 11882000 7349100 16708000 19311000 21540000 16856000 16083000 30061000 60401 3443 54340 510265;510266;510267;510268;510269;510270;510271;510272;510273;510274;510275;510276 405064;405065;405066;405067;405068;405069;405070;405071;405072;405073;405074;405075 405072 11 YLADGDLHSDGPGR Unmodified 1471.6692 0.66917039 4492 Q9HAW4 CLSPN Claspin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 35.112 35.388 3 0.0066024 39177 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 40.278 26.598 63352000 0 0 0 8359900 0 6006000 0 0 0 0 0 14995000 10047000 10041000 13904000 60402 4492 54341 510277;510278;510279;510280;510281;510282 405076;405077;405078;405079;405080 405076 4 YLADLPTLEDHQK Unmodified 1541.7726 0.77257283 2928 Q6P2H3 CEP85 Centrosomal protein of 85 kDa yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.025 67.107 3 0.01288 76155 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.439 18.531 59559000 0 0 0 1972500 1796700 4271100 3868900 3814800 4700800 6582100 6183700 5416300 3770900 5328700 11853000 60403 2928 54342 510283;510284;510285;510286;510287;510288;510289;510290;510291;510292;510293;510294 405081;405082;405083;405084;405085;405086;405087 405083 7 YLAEFATGNDR Unmodified 1255.5833 0.5833155 1882 P62258 YWHAE 14-3-3 protein epsilon yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 50.908 51.608 2 0.0096127 57521 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.076 33.266 32507000 0 0 0 0 0 0 0 0 0 0 0 10511000 0 0 21996000 60404 1882 54343 510295;510296 405088;405089 405088 2 YLAEFATGNDRK Unmodified 1383.6783 0.67827852 1882 P62258 YWHAE 14-3-3 protein epsilon yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.6 3.67 3 7 2 1 1 1 1 1 1 1 1 42.596 41.635 3 1.6804E-08 45138 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 121.02 98.104 1984600000 42168000 0 8101100 88371000 0 83692000 0 0 0 0 327480000 332680000 140960000 248500000 712690000 60405 1882 54344 510297;510298;510299;510300;510301;510302;510303;510304;510305;510306 405090;405091;405092;405093;405094;405095;405096;405097;405098;405099;405100;405101;405102;405103;405104;405105;405106;405107;405108 405103 18 YLAEVAAGDDK Unmodified 1150.5506 0.55061839 1940 P63104 YWHAZ 14-3-3 protein zeta/delta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.18 3.29 3 1 13 1 2 1 1 1 1 1 1 1 2 2 2 1 33.43 32.432 2 6.6236E-05 39828 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 132.01 93.219 1773400000 17932000 569330000 10596000 32276000 20369000 54603000 33367000 0 0 51102000 153280000 183390000 47412000 151710000 448040000 60406 1940 54345 510307;510308;510309;510310;510311;510312;510313;510314;510315;510316;510317;510318;510319;510320;510321;510322;510323 405109;405110;405111;405112;405113;405114;405115;405116;405117;405118;405119;405120;405121;405122;405123;405124;405125 405118 16 YLAEVAAGDDKK Unmodified 1278.6456 0.6455814 1940 P63104 YWHAZ 14-3-3 protein zeta/delta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.26 3.23 5 2 24 2 4 1 2 2 2 2 2 2 2 2 2 2 2 2 29.023 28.082 2;3 1.6451E-21 35098 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 161.17 123.45 3175000000 72521000 833000000 7776000 64386000 51872000 49842000 78412000 72204000 34883000 104240000 381710000 336330000 78301000 257340000 752230000 60407 1940 54346 510324;510325;510326;510327;510328;510329;510330;510331;510332;510333;510334;510335;510336;510337;510338;510339;510340;510341;510342;510343;510344;510345;510346;510347;510348;510349;510350;510351;510352;510353;510354 405126;405127;405128;405129;405130;405131;405132;405133;405134;405135;405136;405137;405138;405139;405140;405141;405142;405143;405144;405145;405146;405147;405148;405149;405150;405151;405152;405153;405154;405155;405156;405157;405158 405140 21 YLAEVACGDDRK Unmodified 1395.6453 0.64526383 1214 P27348 YWHAQ 14-3-3 protein theta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.61 2.99 4 1 23 2 2 1 2 2 2 2 2 2 2 2 2 2 1 2 30.256 29.738 2;3 0.00047703 32113 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 67.519 58.79 679000000 7295600 39306000 14517000 23080000 17801000 28668000 24320000 21755000 24636000 41712000 82350000 88597000 47754000 10488000 206720000 60408 1214 54347 510355;510356;510357;510358;510359;510360;510361;510362;510363;510364;510365;510366;510367;510368;510369;510370;510371;510372;510373;510374;510375;510376;510377;510378;510379;510380;510381;510382 405159;405160;405161;405162;405163;405164;405165;405166;405167;405168;405169;405170;405171;405172;405173 405170 9 YLAEVASGEK Unmodified 1065.5342 0.53424004 2109 Q04917 YWHAH 14-3-3 protein eta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34.465 31.669 2 0.0016398 33990 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 104.2 61.077 370310000 7525600 292680000 2148600 0 0 12171000 0 0 0 0 0 0 0 0 55789000 60409 2109 54348 510383;510384;510385;510386;510387;510388;510389;510390;510391;510392;510393;510394;510395;510396 405174;405175;405176;405177;405178;405179;405180;405181;405182;405183;405184;405185 405178 12 YLAEVATGDDK Unmodified 1180.5612 0.56118307 1312 P31947 SFN 14-3-3 protein sigma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 36.458 36.24 2 1.0396E-05 39070 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 138.66 124.5 757260000 0 128990000 0 74895000 16388000 29709000 25909000 29002000 15731000 38078000 64833000 65382000 33777000 73231000 161340000 60410 1312 54349 510397;510398;510399;510400;510401;510402;510403;510404;510405;510406;510407;510408;510409 405186;405187;405188;405189;405190;405191;405192;405193;405194;405195;405196;405197 405190 9 YLAEVATGDDKK Unmodified 1308.6561 0.65614609 1312 P31947 SFN 14-3-3 protein sigma yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.47 3.07 4 2 24 1 4 1 2 2 2 2 2 2 2 2 2 2 2 2 28.783 28.018 2;3 1.4338E-14 37471 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 175.65 134.62 763720000 10316000 185610000 3665100 74168000 22511000 15229000 26929000 25501000 10600000 33358000 77983000 66545000 21460000 52394000 137450000 60411 1312 54350 510410;510411;510412;510413;510414;510415;510416;510417;510418;510419;510420;510421;510422;510423;510424;510425;510426;510427;510428;510429;510430;510431;510432;510433;510434;510435;510436;510437;510438;510439 405198;405199;405200;405201;405202;405203;405204;405205;405206;405207;405208;405209;405210;405211;405212;405213;405214;405215;405216;405217;405218;405219;405220;405221;405222;405223;405224;405225;405226 405204 20 YLAEVATGEK Unmodified 1079.5499 0.5498901 1869 P61981 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 37.085 35.899 2 0.0006507 38553 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 122.13 96.03 1749100000 15671000 671850000 11695000 37767000 27819000 0 40022000 39035000 27666000 73326000 149770000 137550000 64862000 135510000 316510000 60412 1869 54351 510440;510441;510442;510443;510444;510445;510446;510447;510448;510449;510450;510451;510452;510453;510454 405227;405228;405229;405230;405231;405232;405233;405234;405235;405236;405237;405238;405239;405240;405241;405242;405243;405244;405245;405246;405247 405232 16 YLAGADPSTVEMCYPPIIQSGGNYNLK Oxidation (M) 2973.3888 0.38884472 5231 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 1 0 By MS/MS 2 0 1 1 87.498 82.69 3 2.8305E-29 102654 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.239 85.252 51135000 0 51135000 0 0 0 0 0 0 0 0 0 0 0 0 0 60413 5231 54352 510455 405248 405248 6635 1 YLAGADPSTVEMCYPPIIQSGGNYNLK Unmodified 2957.3939 0.39393009 5231 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 0 0 By MS/MS 2 0 1 1 91.823 86.912 3 4.5597E-67 107925 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 125.62 119.83 100530000 0 100530000 0 0 0 0 0 0 0 0 0 0 0 0 0 60414 5231 54352 510456 405249 405249 1 YLAIAPPIIK Unmodified 1097.6849 0.68486744 2608 Q16531 DDB1 DNA damage-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.76 3.47 3 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 83.983 82.721 2 0.0032212 95592 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 77.282 77.282 2511600000 854260000 879110000 52877000 14750000 18201000 34161000 21729000 23631000 22007000 42869000 64619000 84245000 50797000 89959000 258350000 60415 2608 54353 510457;510458;510459;510460;510461;510462;510463;510464;510465;510466;510467;510468;510469;510470;510471;510472;510473 405250;405251;405252;405253;405254;405255;405256;405257;405258;405259;405260;405261;405262;405263;405264;405265;405266;405267;405268 405251 19 YLANIEQQHGNSGR Unmodified 1585.7597 0.75971673 4978 Q9UKX7 NUP50 Nuclear pore complex protein Nup50 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.376 29.568 3 8.1089E-14 30670 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.823 87.895 295940000 0 0 0 14064000 11796000 21304000 15383000 20466000 14634000 25981000 24627000 29694000 31522000 22190000 64278000 60416 4978 54354 510474;510475;510476;510477;510478;510479;510480;510481;510482;510483;510484;510485 405269;405270;405271;405272;405273;405274;405275;405276;405277;405278;405279;405280;405281;405282;405283;405284;405285;405286 405274 18 YLANIEQQHGNSGRNSESESNK Unmodified 2461.1218 0.12180607 4978 Q9UKX7 NUP50 Nuclear pore complex protein Nup50 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 29.536 25.123 4 1.82E-06 35097 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 69.398 66.516 266660000 245900000 0 20760000 0 0 0 0 0 0 0 0 0 0 0 0 60417 4978 54355 510486;510487 405287;405288 405287 2 YLAPSGPSGTLK Unmodified 1189.6343 0.63428844 2626 Q16658 FSCN1 Fascin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.569 45.738 2 0.00019018 50203 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.775 84.553 606070000 0 0 0 17247000 6131500 6361000 5760200 7543300 4125600 8396700 102480000 93264000 9510800 76135000 269110000 60418 2626 54356 510488;510489;510490;510491;510492;510493;510494;510495;510496;510497;510498;510499 405289;405290;405291;405292;405293;405294;405295;405296;405297;405298;405299;405300;405301 405292 13 YLAQYYFK Unmodified 1094.5437 0.54368251 4943 Q9UJX2 CDC23 Cell division cycle protein 23 homolog yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.938 67.021 2 0.030584 77439 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 55.441 28.187 78621000 0 0 0 4021500 3390200 5358000 4209900 7502900 3814300 6140600 6928300 8707100 5783300 5987000 16778000 60419 4943 54357 510500;510501;510502;510503;510504;510505;510506;510507;510508;510509;510510;510511 405302;405303;405304 405304 3 YLASAGEDQR Unmodified 1108.5149 0.51490158 513 O75529 TAF5L TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 17.914 18.106 2 0.0024724 18452 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 83.265 40.018 42853000 0 0 0 2695600 3113500 2783400 2770900 3321100 0 3924400 4123400 6554700 4194200 3794500 5576900 60420 513 54358 510512;510513;510514;510515;510516;510517;510518;510519;510520;510521;510522 405305;405306;405307;405308;405309;405310;405311;405312;405313;405314 405307 10 YLASAGEDQRLK Unmodified 1349.6939 0.69392858 513 O75529 TAF5L TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L yes yes 0 0 1 By MS/MS 2 0 1 1 32.173 28.901 3 0.010313 36604 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 53.967 43.018 8354100 0 0 8354100 0 0 0 0 0 0 0 0 0 0 0 0 60421 513 54359 510523 405315 405315 1 YLASGAIDGIINIFDIATGK Unmodified 2051.0939 0.09390697 4304 Q9GZS3 WDR61 WD repeat-containing protein 61;WD repeat-containing protein 61, N-terminally processed yes yes 0 0 0 By MS/MS 3 0 1 1 103.15 99.535 2 0.00056601 119670 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 71.548 55.658 1882000 0 1882000 0 0 0 0 0 0 0 0 0 0 0 0 0 60422 4304 54360 510524 405316;405317 405316 2 YLASGSFDK Unmodified 986.47091 0.4709115 4270;443;4091 Q9BZK7;O60907;Q9BQ87 TBL1XR1;TBL1X;TBL1Y F-box-like/WD repeat-containing protein TBL1XR1;F-box-like/WD repeat-containing protein TBL1X;F-box-like/WD repeat-containing protein TBL1Y no no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 36.456 35.65 2 0.0031256 39504 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 90.657 78.45 642850000 0 92416000 2352600 25796000 30948000 36224000 36282000 38808000 31095000 48728000 71099000 72926000 59110000 0 97064000 60423 4270;443;4091 54361 510525;510526;510527;510528;510529;510530;510531;510532;510533;510534;510535;510536;510537;510538 405318;405319;405320;405321;405322;405323;405324;405325;405326;405327;405328;405329;405330;405331;405332 405321 11 YLASVAAGK Unmodified 878.48617 0.48616764 3621 Q92547 TOPBP1 DNA topoisomerase 2-binding protein 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 30.458 29.223 2 0.0088229 37879 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.046 50.21 114720000 12941000 54208000 0 0 4645600 7143300 6193100 0 0 0 7673200 0 0 7649100 14265000 60424 3621 54362 510539;510540;510541;510542;510543;510544;510545;510546 405333;405334 405334 2 YLCDEQK Unmodified 954.41168 0.41168206 2102 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12.746 12.348 2 0.023849 10827 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 100.74 67.004 441950000 23142000 173530000 0 11300000 12984000 12523000 14260000 14448000 14127000 26015000 22296000 47017000 19113000 14748000 36445000 60425 2102 54363 510547;510548;510549;510550;510551;510552;510553;510554;510555;510556;510557;510558;510559;510560 405335;405336;405337;405338;405339;405340;405341 405340 5 YLDEAEREK Unmodified 1151.5459 0.54586736 4800 Q9P0W2 HMG20B SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 15.286 15.423 3 0.020962 14893 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 47.706 28.391 59326000 0 0 0 0 0 9420700 0 10118000 6320600 11303000 0 0 22163000 0 0 60426 4800 54364 510561;510562;510563;510564;510565 405342 405342 1 YLDEDTIYHLQPSGR Unmodified 1805.8584 0.85842773 1297 P31153 MAT2A S-adenosylmethionine synthase isoform type-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 17 1 1 1 1 2 1 1 2 2 1 2 2 68.985 69.129 2;3 8.0339E-23 79310 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 119.76 105.61 412170000 0 0 0 9862600 6362500 16112000 8228700 13469000 11951000 20300000 46580000 57453000 13844000 35575000 172430000 60427 1297 54365 510566;510567;510568;510569;510570;510571;510572;510573;510574;510575;510576;510577;510578;510579;510580;510581;510582 405343;405344;405345;405346;405347;405348;405349;405350;405351;405352;405353;405354;405355;405356;405357;405358 405349 14 YLDEFLLNK Unmodified 1153.6019 0.60192568 2295 Q13459 MYO9B Unconventional myosin-IXb yes yes 0 0 0 By MS/MS 10 0 1 1 79.117 79.363 2 0.03575 91352 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 45.972 32.935 7659600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7659600 60428 2295 54366 510583 405359 405359 1 YLDEIVK Unmodified 878.47493 0.47493425 965 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 49.254 49.412 2 0.023335 56091 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 90.706 29.584 717210000 0 0 0 36550000 34401000 51882000 43702000 48675000 43893000 64767000 81294000 82466000 54381000 65054000 110140000 60429 965 54367 510584;510585;510586;510587;510588;510589;510590;510591;510592;510593;510594;510595 405360;405361;405362;405363 405360 4 YLDELMK Oxidation (M) 926.44192 0.44191956 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.072 39.252 2 0.025481 44404 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 69.383 14.619 1124400000 0 0 0 95656000 73032000 126370000 94705000 55098000 71182000 122930000 103990000 116300000 100130000 60319000 104730000 60430 1518 54368 510596;510597;510598;510599;510600;510601;510602;510603;510604;510605;510606;510607 405364;405365 405365 2 YLDELMK Unmodified 910.447 0.44700494 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 56.319 56.488 2 0.028147 64107 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 76.847 17.206 877480000 0 0 0 75857000 0 101560000 0 95002000 59856000 103300000 0 103630000 83540000 90318000 164420000 60431 1518 54368 510608;510609;510610;510611;510612;510613;510614;510615;510616 405366 405366 1 YLDFSSIITEVR Unmodified 1441.7453 0.74529545 100 CON__Q7RTT2;CON__Q8N1N4-2;Q8N1N4 KRT78 Keratin, type II cytoskeletal 78 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 93.091 93.104 2 0.0009629 108225 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 72.006 61.774 + 7133600 0 0 0 2346900 0 779340 0 2338900 0 1668400 0 0 0 0 0 60432 100 54369 510617;510618;510619;510620 405367;405368;405369;405370 405368 4 YLDGLTAER Unmodified 1036.5189 0.51892433 79 CON__P35908v2;P35908;CON__P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.829 48.988 2 2.5497E-05 55078 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 138.54 73.768 + 6143800000 0 0 0 605670000 326950000 368440000 219740000 737290000 284100000 614710000 459960000 1462500000 590430000 265640000 208360000 60433 79 54370 510621;510622;510623;510624;510625;510626;510627;510628;510629;510630;510631;510632 405371;405372;405373;405374;405375;405376;405377;405378;405379;405380;405381;405382;405383;405384;405385 405374 14 YLDLEEEADTTK Unmodified 1425.6511 0.65112029 4983 Q9UL15 BAG5 BAG family molecular chaperone regulator 5 yes yes 0 0 0 By MS/MS By MS/MS 5 3.56 1 1 1 2 1 59.033 55.682 2 3.1119E-14 70933 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.52 122.4 174950000 0 164880000 0 0 0 0 0 0 0 0 0 0 0 0 10074000 60434 4983 54371 510633;510634;510635 405386;405387 405386 2 YLDLHDCYLK Unmodified 1338.6278 0.62782285 2202 Q12874 SF3A3 Splicing factor 3A subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 1 1 1 2 2 1 1 2 2 2 2 62.802 62.963 2;3 0.0023811 72368 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 65.5 55.175 331630000 0 0 0 8959500 6800200 18658000 10912000 13152000 31505000 16478000 26623000 54111000 40927000 32650000 70855000 60435 2202 54372 510636;510637;510638;510639;510640;510641;510642;510643;510644;510645;510646;510647;510648;510649;510650;510651;510652;510653 405388;405389;405390;405391;405392;405393;405394;405395;405396;405397;405398;405399;405400 405395 9 YLDNIHLHPEEEK Unmodified 1635.7893 0.78928553 4276 Q9BZV1 UBXN6 UBX domain-containing protein 6 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.495 47.659 4 0.009526 53586 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 39.016 26.389 127340000 0 0 0 4436000 2682400 13063000 5773500 7751300 8203200 11389000 8996700 16362000 10256000 9182200 29246000 60436 4276 54373 510654;510655;510656;510657;510658;510659;510660;510661;510662;510663;510664;510665 405401;405402;405403;405404;405405 405401 5 YLDNPNALTER Unmodified 1304.6361 0.63607935 2839 Q63ZY3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 49.33 49.567 2 0.00013158 55563 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 109.66 96.085 141840000 0 0 0 0 11736000 14989000 10758000 0 7570200 21245000 16717000 18700000 17935000 0 22192000 60437 2839 54374 510666;510667;510668;510669;510670;510671;510672;510673;510674;510675 405406;405407;405408;405409;405410;405411;405412;405413;405414;405415 405414 10 YLDNPNALTERELK Unmodified 1674.8577 0.85769944 2839 Q63ZY3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 63.079 58.235 3 0.0029409 75125 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 59.709 53.814 36328000 0 21013000 15315000 0 0 0 0 0 0 0 0 0 0 0 0 60438 2839 54375 510676;510677 405416;405417 405416 2 YLDNVVNK Unmodified 963.50255 0.50254598 2843 Q66K14 TBC1D9B TBC1 domain family member 9B yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 34.986 35.263 2 0.015722 38794 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 68.422 46.651 84865000 0 0 0 5405800 0 0 6218000 7343100 0 8581400 11739000 11129000 8325100 8457800 17666000 60439 2843 54376 510678;510679;510680;510681;510682;510683;510684;510685;510686 405418;405419;405420 405418 3 YLDPEYIDR Unmodified 1182.5557 0.55570376 561 O75935 DCTN3 Dynactin subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 57.117 57.295 2 0.0052172 64685 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 88.948 71.562 95278000 0 0 0 6229500 0 7999700 6193600 6527200 3732600 7869500 12345000 9451900 7847800 9450800 17631000 60440 561 54377 510687;510688;510689;510690;510691;510692;510693;510694;510695;510696;510697 405421;405422;405423;405424;405425;405426;405427;405428;405429;405430 405429 10 YLDPEYIDRIAIPDASK Unmodified 1978.0048 0.004757612 561 O75935 DCTN3 Dynactin subunit 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.2 0.4 4 1 1 3 1 87.43 82.736 2;3 0.0020861 104510 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 49.537 44.535 443450000 26133000 405830000 11486000 0 0 0 0 0 0 0 0 0 0 0 0 60441 561 54378 510698;510699;510700;510701;510702 405431;405432;405433;405434;405435;405436 405434 5 YLDPSFFQHR Unmodified 1308.6251 0.62512073 4528 Q9HD45 TM9SF3 Transmembrane 9 superfamily member 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.108 69.185 3 0.0028855 78649 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.65 53.43 69866000 0 0 0 4750100 2565800 7182300 3743300 5512700 5291500 3583500 4681400 6356700 5157400 6108900 14933000 60442 4528 54379 510703;510704;510705;510706;510707;510708;510709;510710;510711;510712;510713;510714 405437;405438;405439;405440;405441 405438 5 YLDQMEDLYEDFHIVK Unmodified 2056.9452 0.94519382 353 O43681 ASNA1 ATPase ASNA1 yes yes 0 0 0 By MS/MS By MS/MS 2.5 0.5 2 2 2 2 95.401 90.004 3 1.9721E-05 113550 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.904 92.8 380840000 337310000 43529000 0 0 0 0 0 0 0 0 0 0 0 0 0 60443 353 54380 510715;510716;510717;510718 405442;405443;405444;405445 405445 3 YLDQMEDLYEDFHIVK Oxidation (M) 2072.9401 0.94010844 353 O43681 ASNA1 ATPase ASNA1 yes yes 0 1 0 By MS/MS 2 0 1 1 87.588 79.457 3 0.0022459 103377 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.077 41.79 30545000 30545000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60444 353 54380 510719 405446 405446 441 1 YLDSDTEK Unmodified 969.42911 0.42910627 329 O43432 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 13.358 13.515 2 0.017693 12618 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 65.252 42.233 20242000 0 0 0 1618900 1333500 2234700 0 1517600 0 2427900 3508100 3772700 0 0 3828800 60445 329 54381 510720;510721;510722;510723;510724;510725;510726;510727 405447;405448;405449;405450 405449 4 YLDSIPPGQYMDSSLVK Oxidation (M) 1927.9237 0.9237301 822 P06493 CDK1 Cyclin-dependent kinase 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 2 1 1 1 1 1 1 74.877 74.438 2 8.92E-09 91774 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.38 93.208 206380000 0 142070000 0 0 0 8042900 0 6476100 6352000 9625400 12760000 10785000 0 0 10268000 60446 822 54382 510728;510729;510730;510731;510732;510733;510734;510735;510736 405451;405452;405453;405454;405455;405456;405457;405458;405459;405460;405461;405462 405456 989 12 YLDSIPPGQYMDSSLVK Unmodified 1911.9288 0.92881548 822 P06493 CDK1 Cyclin-dependent kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 3.8 3.12 3 1 1 1 3 1 84.329 80.186 2;3 0.00028143 100342 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.44 96.548 552300000 6891900 523940000 0 0 0 0 0 0 0 0 0 0 0 0 21464000 60447 822 54382 510737;510738;510739;510740;510741 405463;405464;405465;405466;405467;405468;405469;405470 405464 7 YLDVIRETNK Unmodified 1249.6667 0.6666512 2302 Q13496 MTM1 Myotubularin yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 51.801 45.125 2;3 0.0045803 62223 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.32 16.501 46025000 42868000 0 3156400 0 0 0 0 0 0 0 0 0 0 0 0 60448 2302 54383 510742;510743;510744 405471;405472 405471 2 YLEANMTQSALPK Oxidation (M) 1480.7232 0.7231798 4636 Q9NTK5 OLA1 Obg-like ATPase 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 6 4 2 2 1 1 1 1 49.113 45.871 2 5.2943E-21 59455 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 138.25 118.11 324660000 6947300 303340000 0 0 0 7441900 0 0 0 0 0 0 0 0 6932400 60449 4636 54384 510745;510746;510747;510748 405473;405474;405475;405476;405477;405478;405479 405476 6046 7 YLEANMTQSALPK Unmodified 1464.7283 0.72826518 4636 Q9NTK5 OLA1 Obg-like ATPase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62.676 61.558 2 6.2043E-21 77748 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 169.65 139.99 1753500000 19085000 1563600000 5496900 7248500 5720000 19336000 9540300 8437500 4116400 18094000 18034000 14062000 10747000 15836000 34096000 60450 4636 54384 510749;510750;510751;510752;510753;510754;510755;510756;510757;510758;510759;510760;510761;510762;510763 405480;405481;405482;405483;405484;405485;405486;405487;405488;405489;405490;405491;405492;405493;405494;405495;405496;405497 405483 18 YLEATGQLPVK Unmodified 1217.6656 0.66558856 3972 Q96RP9 GFM1 Elongation factor G, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 64.694 58.777 2 0.0016033 75421 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 118.26 75.237 128260000 0 128260000 0 0 0 0 0 0 0 0 0 0 0 0 0 60451 3972 54385 510764 405498 405498 0 YLEAVEK Unmodified 850.44363 0.44363412 916 P10155 TROVE2 60 kDa SS-A/Ro ribonucleoprotein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 8.4 3.2 3 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 28.214 27.694 2 0.026251 30275 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 79.116 18.328 1297700000 8701700 1163500000 0 10112000 6210900 5320100 6614600 7867900 6975600 8185800 14290000 13591000 8724500 13041000 24512000 60452 916 54386 510765;510766;510767;510768;510769;510770;510771;510772;510773;510774;510775;510776;510777;510778;510779 405499;405500;405501;405502 405499 4 YLECSALQQDGVK Unmodified 1509.7133 0.71334339 2014 P84095 RHOG Rho-related GTP-binding protein RhoG yes yes 0 0 0 By MS/MS 10 0 1 1 50.586 51.012 2 0.0080601 57491 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 61.213 33.909 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60453 2014 54387 510780 405503 405503 1 YLECSALTQR Unmodified 1239.5918 0.59177169 1936 P63000;P60763;P15153 RAC1;RAC3;RAC2 Ras-related C3 botulinum toxin substrate 1;Ras-related C3 botulinum toxin substrate 3;Ras-related C3 botulinum toxin substrate 2 yes no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 46.785 44.95 2 0.0032899 57360 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 96.331 31.293 36981000 0 28163000 0 0 0 2441600 0 0 6376500 0 0 0 0 0 0 60454 1936 54388 510781;510782;510783;510784;510785;510786 405504;405505;405506;405507;405508;405509 405506 6 YLECSALTQRGLK Unmodified 1537.7923 0.79226242 1936 P63000;P60763;P15153 RAC1;RAC3;RAC2 Ras-related C3 botulinum toxin substrate 1;Ras-related C3 botulinum toxin substrate 3;Ras-related C3 botulinum toxin substrate 2 yes no 0 0 1 By MS/MS By matching 2 0 2 1 1 58.666 52.619 3 0.00038809 71284 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 92.856 74.72 42853000 40689000 0 2164400 0 0 0 0 0 0 0 0 0 0 0 0 60455 1936 54389 510787;510788 405510;405511;405512 405511 3 YLEDGGLER Unmodified 1050.4982 0.49818889 834 P07099 EPHX1 Epoxide hydrolase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 33.592 33.729 2 0.006387 36645 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 75.213 7.2319 225850000 0 0 0 17216000 14238000 15307000 14669000 15921000 14987000 24179000 30536000 31909000 26039000 20854000 0 60456 834 54390 510789;510790;510791;510792;510793;510794;510795;510796;510797;510798;510799 405513;405514 405514 2 YLEDGGLERK Unmodified 1178.5932 0.5931519 834 P07099 EPHX1 Epoxide hydrolase 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.588 27.785 3 0.01115 30161 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 38.478 8.2232 138710000 0 0 0 6007000 11483000 9006600 11011000 11647000 10031000 10692000 14496000 17291000 13233000 10898000 12910000 60457 834 54391 510800;510801;510802;510803;510804;510805;510806;510807;510808;510809;510810;510811 405515;405516;405517;405518;405519;405520;405521;405522 405521 6 YLEDRDLQ Unmodified 1050.4982 0.49818889 470 O75175 CNOT3 CCR4-NOT transcription complex subunit 3 yes yes 0 0 1 By MS/MS 10 0 1 1 33.009 33.725 2 0.042441 35966 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 119.29 46.031 28935000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28935000 60458 470 54392 510812 405523 405523 0 YLEEIATQMR Oxidation (M) 1268.6071 0.60708741 2064 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 46.591 46.731 2 0.00060728 52179 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 113.66 85.26 435850000 0 0 0 27559000 29353000 35177000 34831000 35912000 21178000 42769000 0 69686000 57379000 30544000 51461000 60459 2064 54393 510813;510814;510815;510816;510817;510818;510819;510820;510821;510822;510823 405524;405525;405526;405527;405528;405529;405530;405531;405532 405531 3357 6 YLEEIATQMR Unmodified 1252.6122 0.61217279 2064 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.632 63.723 2 0.00052853 73134 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 124.23 112.38 494920000 0 0 0 20578000 34447000 40483000 25114000 47234000 24467000 42646000 52996000 55567000 32509000 41047000 77836000 60460 2064 54393 510824;510825;510826;510827;510828;510829;510830;510831;510832;510833;510834;510835 405533;405534;405535;405536;405537;405538;405539;405540;405541;405542;405543;405544 405541 6 YLEEQIGAHRK Unmodified 1342.6993 0.69934831 3436 Q8NEZ4 KMT2C Histone-lysine N-methyltransferase 2C yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 24.166 24.623 3 0.0046073 24965 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.718 20.69 13146000 0 0 0 0 0 0 0 0 0 2077300 0 4168800 0 2225300 4674900 60461 3436 54394 510836;510837;510838;510839 405545;405546;405547 405545 3 YLEHGEYEGNLYGTK Unmodified 1771.8053 0.80532952 4783 Q9NZW5 MPP6 MAGUK p55 subfamily member 6 yes yes 0 0 0 By MS/MS 2 0 1 1 50.033 46.118 3 0.0037496 57961 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 33.681 30.446 8125200 0 0 8125200 0 0 0 0 0 0 0 0 0 0 0 0 60462 4783 54395 510840 405548 405548 1 YLEHLVIDK Unmodified 1128.6179 0.61791009 3545 Q8WUH2 TGFBRAP1 Transforming growth factor-beta receptor-associated protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 64.534 56.255 2 0.035373 75706 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.534 31.214 6649800 6649800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60463 3545 54396 510841 405549 405549 1 YLELLER Unmodified 934.51238 0.51238239 465 O75153 CLUH Clustered mitochondria protein homolog yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 68.304 68.454 2 0.029947 78763 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 75.189 34.986 60062000 0 0 0 0 2726500 4712500 3670000 3079400 2457100 0 6598800 5881000 4334900 7383500 19218000 60464 465 54397 510842;510843;510844;510845;510846;510847;510848;510849;510850;510851 405550;405551 405550 2 YLELLGYRK Unmodified 1153.6495 0.64954457 614 O94979 SEC31A Protein transport protein Sec31A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 65.556 65.621 3 0.0054899 75157 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 60.436 26.184 66802000 0 0 0 2756300 1878900 8054500 3132800 3977300 6312400 3438300 0 7137800 5224300 5759800 19129000 60465 614 54398 510852;510853;510854;510855;510856;510857;510858;510859;510860;510861;510862 405552;405553;405554;405555 405552 4 YLEMIYSMCK 2 Oxidation (M) 1368.5764 0.57638091 649 O95373 IPO7 Importin-7 yes yes 0 2 0 By MS/MS 2 0 1 1 56.07 50.255 2 0.024069 64965 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.299 59.563 11054000 0 11054000 0 0 0 0 0 0 0 0 0 0 0 0 0 60466 649 54399 510863 405556 405556 1 YLENQTFR Unmodified 1069.5193 0.51925868 116 O00139 KIF2A Kinesin-like protein KIF2A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 37.432 37.561 2 0.023266 41293 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 60.478 19.175 44188000 0 0 0 2666200 2797700 7017300 2743000 3230200 2411900 3935400 5087100 0 3591300 3954800 6752600 60467 116 54400 510864;510865;510866;510867;510868;510869;510870;510871;510872;510873;510874 405557;405558 405557 2 YLENYDAIR Unmodified 1155.556 0.55603811 1020 P15374 UCHL3 Ubiquitin carboxyl-terminal hydrolase isozyme L3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 51.263 51.613 2 0.0050696 58572 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 84.568 45.349 93599000 0 0 0 0 0 6293800 4619000 0 0 0 0 19745000 0 12937000 50005000 60468 1020 54401 510875;510876;510877;510878;510879 405559;405560;405561;405562 405559 4 YLENYDAIRVTHETSAHEGQTEAPSIDEK Unmodified 3302.5327 0.53274308 1020 P15374 UCHL3 Ubiquitin carboxyl-terminal hydrolase isozyme L3 yes yes 0 0 1 By MS/MS 2 0 1 1 69.282 60.987 4 0.021229 81473 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 21.73 16.971 8099000 8099000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60469 1020 54402 510880 405563 405563 1 YLEPLYNDYRK Unmodified 1472.73 0.72997974 3383 Q8NAV1 PRPF38A Pre-mRNA-splicing factor 38A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57.887 56.788 3 0.00055975 64516 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 70.942 57.43 134030000 15898000 12778000 7822600 7152500 4226700 7087800 7144700 6445100 8553700 11511000 7754100 10635000 8805300 7257600 10962000 60470 3383 54403 510881;510882;510883;510884;510885;510886;510887;510888;510889;510890;510891;510892;510893;510894;510895 405564;405565;405566;405567;405568;405569;405570;405571;405572;405573;405574;405575 405574 12 YLEQQEGQLK Unmodified 1234.6194 0.61936665 843 P07476 IVL Involucrin yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 32.541 32.433 2 0.0016419 35759 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 104.17 60.921 20964000 0 0 0 15897000 0 0 0 5067000 0 0 0 0 0 0 0 60471 843 54404 510896;510897 405576;405577 405577 2 YLESEEYQER Unmodified 1344.5834 0.58337508 5266 Q9Y676 MRPS18B 28S ribosomal protein S18b, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.115 32.314 2 0.0017004 34086 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 89.247 80.715 51862000 0 0 0 2888300 3348100 3678200 0 2088800 3345500 4209400 6620300 4532600 7529200 4778500 8843300 60472 5266 54405 510898;510899;510900;510901;510902;510903;510904;510905;510906;510907;510908;510909 405578;405579;405580;405581;405582;405583;405584;405585;405586;405587;405588;405589 405585 12 YLESLGEEQRK Unmodified 1350.6779 0.67794416 2082 Q02818 NUCB1 Nucleobindin-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 1 1 2 33.003 33.228 3 0.00059118 36523 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 70.488 31.223 188240000 0 0 0 11871000 8784600 9243100 13069000 10801000 10555000 16273000 19460000 26225000 15523000 16367000 30067000 60473 2082 54406 510910;510911;510912;510913;510914;510915;510916;510917;510918;510919;510920;510921;510922 405590;405591;405592;405593;405594;405595;405596;405597;405598;405599;405600;405601;405602;405603 405599 13 YLESLVQTQQQLIK Unmodified 1689.9301 0.93013611 428 O60749 SNX2 Sorting nexin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 80.61 79.445 2 3.2741E-34 98629 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 197.21 164.79 447840000 9390700 312750000 3027500 0 5168400 11899000 5888300 7444700 5901800 18732000 10880000 13774000 6678700 9585000 26726000 60474 428 54407 510923;510924;510925;510926;510927;510928;510929;510930;510931;510932;510933;510934;510935;510936;510937 405604;405605;405606;405607;405608;405609;405610;405611;405612;405613;405614;405615;405616;405617;405618 405607 15 YLETLLYSQQQLAK Unmodified 1696.9036 0.903587 2323 Q13596 SNX1 Sorting nexin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.58 3 1 9 1 2 1 1 1 1 1 1 1 1 1 1 81.13 79.752 2 4.5668E-34 99221 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 156.57 133.93 120830000 12930000 67559000 2305300 1076800 0 5621100 2735800 3815200 2784800 0 5485600 0 2895700 3517100 10108000 60475 2323 54408 510938;510939;510940;510941;510942;510943;510944;510945;510946;510947;510948;510949;510950 405619;405620;405621;405622;405623 405619 5 YLEVVLNTLQQASQAQVDK Unmodified 2146.127 0.12699801 2457 Q14974 KPNB1 Importin subunit beta-1 yes yes 0 0 0 By MS/MS 10 0 1 1 90.589 90.727 3 0.00018448 105084 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 52.784 48.516 3160300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3160300 60476 2457 54409 510951 405624 405624 1 YLEYLEDGK Unmodified 1128.5339 0.53390569 4434 Q9H7D7 WDR26 WD repeat-containing protein 26 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 7.44 3.62 2 1 6 2 1 1 1 1 1 1 1 57.577 55.742 2 0.0031256 63458 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 91.069 75.187 152270000 0 121440000 1778200 0 0 0 0 0 0 0 0 7318100 4694900 5968700 11076000 60477 4434 54410 510952;510953;510954;510955;510956;510957;510958;510959;510960 405625;405626;405627;405628;405629;405630 405630 6 YLFPEDPSYSSTMIDDEALK Oxidation (M) 2336.0406 0.04061035 2238 Q13131 PRKAA1 5'-AMP-activated protein kinase catalytic subunit alpha-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 84.197 82.989 2 8.167E-82 101967 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 146.96 133 36880000 0 30054000 0 0 2213300 2626700 0 1985900 0 0 0 0 0 0 0 60478 2238 54411 510961;510962;510963;510964 405631;405632 405632 3640 2 YLFPEDPSYSSTMIDDEALK Unmodified 2320.0457 0.045695728 2238 Q13131 PRKAA1 5'-AMP-activated protein kinase catalytic subunit alpha-1 yes yes 0 0 0 By MS/MS 2 0 2 2 91.354 86.443 2;3 1.3829E-127 107337 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 200.16 186.2 106700000 0 106700000 0 0 0 0 0 0 0 0 0 0 0 0 0 60479 2238 54411 510965;510966 405633;405634;405635 405633 2 YLFTGLK Unmodified 840.47454 0.47454032 1741 P54578 USP14 Ubiquitin carboxyl-terminal hydrolase 14 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.253 67.337 2 0.025135 77518 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 81.381 54.261 259920000 0 0 0 9491000 7105800 40825000 13654000 10794000 8397800 22567000 25558000 24570000 14102000 25159000 57700000 60480 1741 54412 510967;510968;510969;510970;510971;510972;510973;510974;510975;510976;510977;510978 405636;405637;405638;405639;405640 405636 5 YLGAMQVADK Oxidation (M) 1110.5379 0.53794521 3600 Q8WYA6 CTNNBL1 Beta-catenin-like protein 1 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 32.974 29.016 2 0.01099 38273 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.614 44.652 105900000 0 103650000 2249100 0 0 0 0 0 0 0 0 0 0 0 0 60481 3600 54413 510979;510980 405641 405641 5098 1 YLGAMQVADK Unmodified 1094.543 0.54303059 3600 Q8WYA6 CTNNBL1 Beta-catenin-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 47.105 46.045 2 0.020509 52753 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 47.198 17.86 26787000 0 0 6425000 4606400 5382700 0 0 0 0 0 0 10373000 0 0 0 60482 3600 54413 510981;510982;510983;510984 405642;405643;405644;405645 405644 4 YLGEGPR Unmodified 790.39735 0.39735263 1482 P43686 PSMC4 26S protease regulatory subunit 6B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.787 19.991 2 0.032282 20294 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 73.039 44.51 377770000 0 0 0 23046000 37894000 33210000 13067000 9357400 6791700 59327000 60205000 89204000 10416000 12222000 23031000 60483 1482 54414 510985;510986;510987;510988;510989;510990;510991;510992;510993;510994;510995;510996 405646;405647;405648 405646 3 YLGFGTPSNLGK Unmodified 1252.6452 0.64518747 573 O76031 CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 71.415 70.858 2 8.9702E-06 91456 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 111.46 61.329 122610000 14867000 0 0 4635300 4599800 9355500 8119600 8586900 5344200 8097300 12340000 12425000 10450000 8550900 15234000 60484 573 54415 510997;510998;510999;511000;511001;511002;511003;511004;511005;511006;511007;511008;511009 405649;405650;405651;405652;405653;405654;405655;405656;405657;405658 405653 9 YLGGSGGAGGR Unmodified 950.45699 0.45699277 2968 Q6SPF0 SAMD1 Atherin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 12.59 12.741 2 0.00084668 11537 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 76.827 24.553 99318000 0 0 0 5284900 7609100 7496400 9799500 8472400 7997900 7776200 8035400 15288000 6252900 7309400 7996400 60485 2968 54416 511010;511011;511012;511013;511014;511015;511016;511017;511018;511019;511020;511021 405659;405660;405661;405662;405663;405664;405665;405666;405667;405668;405669 405663 8 YLGHVEVDESR Unmodified 1302.6204 0.62042929 1597 P49757 NUMB Protein numb homolog yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 33.941 34.141 3 0.0012216 36836 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 59.57 46.993 115170000 0 0 0 5375000 7011200 0 8674400 14918000 5891200 11496000 14568000 12260000 10629000 8177600 16166000 60486 1597 54417 511022;511023;511024;511025;511026;511027;511028;511029;511030;511031;511032 405670;405671;405672 405672 1 YLGHVEVEESR Unmodified 1316.6361 0.63607935 5293 Q9Y6R0 NUMBL Numb-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 34.178 34.361 3 0.00042142 37239 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 65.179 46.08 142920000 0 0 0 8437300 6251800 8147500 9974700 8701300 10899000 12888000 16061000 19358000 10369000 12205000 19625000 60487 5293 54418 511033;511034;511035;511036;511037;511038;511039;511040;511041;511042;511043;511044 405673;405674;405675;405676;405677;405678;405679;405680;405681;405682 405678 8 YLGINSDGLVVGR Unmodified 1361.7303 0.73031409 2404 Q14331 FRG1 Protein FRG1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 77.679 77.787 2 7.409E-09 89947 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 111.06 72.035 101280000 0 0 0 0 7709300 0 5715700 0 6892400 15229000 12039000 20302000 8023200 7571300 17797000 60488 2404 54419 511045;511046;511047;511048;511049;511050;511051;511052;511053;511054 405683;405684;405685;405686;405687;405688;405689;405690;405691;405692;405693 405691 10 YLGLLAMSK Oxidation (M) 1010.5471 0.54705333 193 O14617 AP3D1 AP-3 complex subunit delta-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 62.821 63.006 2 0.0062269 71878 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 66.692 51.471 77757000 0 0 0 0 5511700 0 7740500 8052100 3480700 8723000 8517400 11093000 10052000 8022400 6564600 60489 193 54420 511055;511056;511057;511058;511059;511060;511061;511062;511063;511064;511065 405694;405695;405696;405697;405698;405699;405700;405701;405702;405703;405704 405694 266 11 YLGLLAMSK Unmodified 994.55214 0.55213871 193 O14617 AP3D1 AP-3 complex subunit delta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 77.81 77.15 2 0.005264 88551 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.516 56.385 60385000 13375000 0 0 2680800 0 3202300 4583000 3718700 0 3283100 6369800 5404000 3468100 5640100 8660100 60490 193 54420 511066;511067;511068;511069;511070;511071;511072;511073;511074;511075;511076 405705;405706;405707;405708;405709;405710;405711;405712;405713 405707 9 YLGLLENLR Unmodified 1089.6182 0.61824444 121 O00159 MYO1C Unconventional myosin-Ic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 82.672 82.779 2 0.021188 95000 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 52.482 37.331 18042000 0 0 0 0 0 2102500 0 0 0 2804300 0 0 0 5526600 7608800 60491 121 54421 511077;511078;511079;511080 405714 405714 1 YLGLLENVR Unmodified 1075.6026 0.60259438 367 O43795 MYO1B Unconventional myosin-Ib no no 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 76.364 76.419 2 0.025904 87779 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 50.04 34.889 54808000 0 0 0 0 6403900 8689500 6536600 0 5136200 8931000 10384000 0 8727100 0 0 60492 367 54422 511081;511082;511083;511084;511085;511086;511087;511088 405715;405716;405717 405717 3 YLGNSPYDIALVK Unmodified 1451.766 0.76603089 5289 Q9Y6M0 PRSS21 Testisin yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 79.236 79.328 2 0.00029846 91747 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 81.972 50.898 44133000 0 0 0 0 6471900 0 0 0 0 6501200 10837000 7359600 0 6928300 6035200 60493 5289 54423 511089;511090;511091;511092;511093;511094;511095;511096 405718;405719;405720;405721;405722;405723 405723 6 YLGNTVDLSSFDFR Unmodified 1632.7784 0.77838649 4832 Q9UBB5 MBD2 Methyl-CpG-binding domain protein 2 yes yes 0 0 0 By MS/MS 10 0 1 1 86.802 86.961 2 0.0037946 100581 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 47.288 33.382 2722600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2722600 60494 4832 54424 511097 405724 405724 1 YLGPQYVAGITNLK Unmodified 1535.8348 0.83477916 764 P02788 LTF Lactotransferrin;Lactoferricin-H;Kaliocin-1;Lactoferroxin-A;Lactoferroxin-B;Lactoferroxin-C yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 81.224 81.301 2 0.00012257 93993 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 89.283 73.711 66707000 0 0 0 0 2757900 4004900 2347600 4913500 2425900 34307000 0 6421000 9528600 0 0 60495 764 54425 511098;511099;511100;511101;511102;511103;511104;511105;511106 405725;405726;405727;405728;405729;405730 405726 6 YLGQDYEQLR Unmodified 1283.6146 0.61461563 841 P07384 CAPN1 Calpain-1 catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 54.658 54.787 2 0.00056381 62003 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 140.5 88.506 654040000 0 0 0 55336000 46421000 40786000 80217000 63453000 35419000 0 66961000 63688000 57740000 45145000 98873000 60496 841 54426 511107;511108;511109;511110;511111;511112;511113;511114;511115;511116;511117 405731;405732;405733;405734;405735;405736;405737;405738;405739;405740;405741;405742 405732 12 YLGQDYEQLRVR Unmodified 1538.7841 0.78414057 841 P07384 CAPN1 Calpain-1 catalytic subunit yes yes 0 0 1 By MS/MS 10 0 1 1 58.49 59.091 3 0.039596 66578 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 31.228 19.251 8677700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8677700 60497 841 54427 511118 405743 405743 1 YLGRMTEEPLMCAYCVTEPGAGSDVAGIK Unmodified 3174.4494 0.44941284 944 P11310 ACADM Medium-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 0 0 1 By MS/MS 2 0 1 1 89.428 81.298 3 0.019142 105721 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 20.652 17.823 4525600 4525600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60498 944 54428 511119 405744 405744 1 YLGSPITTVPK Unmodified 1174.6598 0.6597749 1277 P30307 CDC25C M-phase inducer phosphatase 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63.27 62.341 2 0.00042738 71514 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 85.67 68.43 190610000 35105000 59954000 0 4693400 5511500 6407900 6916900 7301000 4844600 8554600 11627000 9183600 7374300 7945200 15194000 60499 1277 54429 511120;511121;511122;511123;511124;511125;511126;511127;511128;511129;511130;511131;511132;511133 405745;405746;405747;405748;405749;405750;405751;405752;405753;405754;405755;405756;405757;405758;405759;405760;405761 405758 17 YLGSWATGK Unmodified 981.49198 0.4919813 4949 Q9UJY4 GGA2 ADP-ribosylation factor-binding protein GGA2 yes yes 0 0 0 By MS/MS 2 0 1 1 56.999 48.818 2 0.027197 66743 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 119.41 103.77 21591000 21591000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60500 4949 54430 511134 405762 405762 0 YLHDESGLNR Unmodified 1202.568 0.56799978 2474 Q15019 SEPT2 Septin-2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 21.215 21.604 3 0.020997 22032 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 61.353 27.975 36124000 0 0 0 0 0 0 5613800 0 0 5512600 11551000 6082300 0 0 7364000 60501 2474 54431 511135;511136;511137;511138;511139 405763 405763 0 YLHDESGLNRR Unmodified 1358.6691 0.66911081 2474 Q15019 SEPT2 Septin-2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 17.646 17.833 3 0.0042152 17131 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.434 46.081 146830000 0 0 0 7036000 5128600 16623000 6497400 11240000 0 14334000 21953000 21407000 15302000 11383000 15928000 60502 2474 54432 511140;511141;511142;511143;511144;511145;511146;511147;511148;511149;511150;511151 405764;405765;405766;405767;405768;405769;405770;405771;405772;405773;405774;405775;405776 405773 11 YLHEALMQNEITK Unmodified 1588.7919 0.79192807 4770 Q9NZJ4 SACS Sacsin yes yes 0 0 0 By MS/MS 2 0 1 1 65.209 56.921 3 0.047211 76604 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 27.969 15.684 8495800 8495800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60503 4770 54433 511152 405777 405777 0 YLHENLPIPQR Unmodified 1378.7357 0.73573382 1749 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 58.252 58.424 3 0.011013 66067 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 30.44 24.146 87825000 0 0 0 4699400 0 8091300 7095100 6575700 4670800 11887000 8502700 9545600 7912900 6219200 12626000 60504 1749 54434 511153;511154;511155;511156;511157;511158;511159;511160;511161;511162;511163 405778;405779;405780;405781;405782 405782 5 YLHENLPIPQRNTN Unmodified 1707.8693 0.86926718 1749 P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 0 0 1 By MS/MS 2 0 1 1 66.036 57.741 3 0.013237 77426 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 43.813 35.636 24901000 24901000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60505 1749 54435 511164 405783 405783 1 YLHPSSYTK Unmodified 1094.5397 0.53965977 2329 Q13617 CUL2 Cullin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 6.57 3.96 3 4 1 1 1 1 1 1 1 23.878 22.299 2 0.0041866 33028 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 114.5 80.759 388830000 274300000 42425000 45615000 0 0 6737400 0 0 0 0 5786500 5284000 0 0 8689500 60506 2329 54436 511165;511166;511167;511168;511169;511170;511171 405784;405785;405786;405787;405788 405785 4 YLHVGYIVPPAPEK Unmodified 1581.8555 0.8555146 428 O60749 SNX2 Sorting nexin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 7.29 3.67 4 2 11 3 2 1 1 1 1 1 1 1 1 1 1 1 1 74.679 72.889 2;3 2.5484E-28 95040 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 160.18 153.8 671990000 434670000 30794000 67401000 6637000 5545700 30191000 12192000 14805000 8817600 16383000 17415000 0 11885000 13178000 2075700 60507 428 54437 511172;511173;511174;511175;511176;511177;511178;511179;511180;511181;511182;511183;511184;511185;511186;511187;511188 405789;405790;405791;405792;405793;405794;405795;405796;405797;405798;405799;405800;405801;405802;405803;405804;405805;405806;405807;405808;405809;405810;405811;405812 405798 23 YLIALYTK Unmodified 983.56917 0.56916898 5203 Q9Y4H2 IRS2 Insulin receptor substrate 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 74.006 74.059 2 0.023266 85302 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 60.478 37.548 84762000 0 0 0 4730500 5564400 8889800 6934400 4948000 8219100 9077100 6576200 13645000 5710100 0 10467000 60508 5203 54438 511189;511190;511191;511192;511193;511194;511195;511196;511197;511198;511199 405813;405814;405815;405816;405817;405818;405819;405820;405821 405814 9 YLIANATNPESK Unmodified 1319.6721 0.67213051 1214 P27348 YWHAQ 14-3-3 protein theta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.05 3.89 2 3 2 12 3 3 1 1 1 1 1 1 1 1 1 1 1 1 1 50.195 49.051 2 3.0581E-08 51286 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 155.42 110.67 6281900000 259950000 4886600000 69306000 33578000 32051000 50750000 44793000 51574000 31011000 71273000 139000000 115370000 59020000 105210000 332480000 60509 1214 54439 511200;511201;511202;511203;511204;511205;511206;511207;511208;511209;511210;511211;511212;511213;511214;511215;511216;511217;511218 405822;405823;405824;405825;405826;405827;405828;405829;405830;405831;405832;405833;405834;405835;405836;405837;405838;405839;405840;405841;405842 405835 19 YLIEIAK Unmodified 848.50076 0.50075507 1728 P53990 IST1 IST1 homolog yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 62.059 62.152 2 0.048847 71248 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 64.803 25.985 70485000 0 0 0 5191300 2805000 8459300 6043200 4067200 0 7941600 7709600 7727300 5725900 5409600 9404700 60510 1728 54440 511219;511220;511221;511222;511223;511224;511225;511226;511227;511228;511229 405843 405843 1 YLIGELVSSK Unmodified 1107.6176 0.61757574 632 O95239;Q2VIQ3 KIF4A;KIF4B Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B yes no 0 0 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 81.522 73.391 2 0.02216 85702 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 61.161 29.872 116700000 116700000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60511 632 54441 511230;511231;511232 405844;405845;405846 405844 2 YLILDEAQNIK Unmodified 1318.7133 0.71326704 3006 Q6ZRS2 SRCAP Helicase SRCAP yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 76.33 76.27 2 0.011536 88053 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 64.485 44.155 18314000 0 0 0 1652200 2724100 0 2673600 0 0 4962500 0 0 3171900 3129600 0 60512 3006 54442 511233;511234;511235;511236;511237;511238 405847;405848;405849;405850 405847 4 YLILGSAVGGGYTAK Unmodified 1468.7926 0.79257999 394 O60313 OPA1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes yes 0 0 0 By MS/MS 10 0 1 1 60.109 60.609 3 0.035684 68961 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 18.015 0 7473900 0 0 0 0 0 0 0 0 0 0 0 7473900 0 0 0 60513 394 54443 511239 405851 405851 1 YLINGVNANNTR Unmodified 1347.6895 0.6895119 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.483 47.646 2 0.0031742 53399 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 74.841 27.654 178250000 0 0 0 8854400 8480000 14580000 9768000 10657000 7214400 17725000 19079000 25190000 15796000 12950000 27955000 60514 643 54444 511240;511241;511242;511243;511244;511245;511246;511247;511248;511249;511250;511251 405852;405853;405854;405855;405856;405857;405858;405859;405860;405861;405862;405863 405857 12 YLIPNAGDATK Unmodified 1161.603 0.60298831 4656 Q9NUY8 TBC1D23 TBC1 domain family member 23 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 51.907 52.004 2 0.0044544 57823 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 61.78 44.394 104500000 0 0 0 5130000 3915400 11871000 6842700 7623100 5793600 13388000 13434000 0 9806100 7787000 18914000 60515 4656 54445 511252;511253;511254;511255;511256;511257;511258;511259;511260;511261;511262 405864;405865;405866;405867;405868;405869;405870;405871;405872;405873;405874;405875 405871 12 YLIPNATQPESK Unmodified 1359.7034 0.70343063 1311 P31946 YWHAB 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.28 3.87 2 3 1 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 53.887 52.571 2 3.0035E-08 60677 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 154.56 154.56 7118200000 252360000 5260500000 69483000 43509000 25675000 59328000 42798000 37392000 27210000 88776000 200170000 243740000 68576000 134100000 564610000 60516 1311 54446 511263;511264;511265;511266;511267;511268;511269;511270;511271;511272;511273;511274;511275;511276;511277;511278;511279;511280 405876;405877;405878;405879;405880;405881;405882;405883;405884;405885;405886;405887;405888;405889;405890;405891;405892;405893;405894;405895 405895 20 YLIQDSSILQK Unmodified 1306.7133 0.71326704 2966 Q6R327 RICTOR Rapamycin-insensitive companion of mTOR yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 70.384 70.466 2 0.010435 81071 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 49.536 24.613 14611000 0 0 0 0 3034100 0 0 0 0 3297900 2249100 3191500 2838600 0 0 60517 2966 54447 511281;511282;511283;511284;511285 405896;405897 405896 2 YLIVDEGHR Unmodified 1100.5615 0.56145784 4617 Q9NRZ9 HELLS Lymphoid-specific helicase yes yes 0 0 0 By matching By MS/MS By matching By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 38.016 38.442 2 0.014773 41499 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.96 33.037 19506000 0 0 0 0 0 4069100 0 0 0 3705000 4193200 3128800 0 0 4410000 60518 4617 54448 511286;511287;511288;511289;511290;511291 405898;405899 405898 2 YLIYDIIK Unmodified 1039.5954 0.59538373 450 O60942 RNGTT mRNA-capping enzyme;Polynucleotide 5'-triphosphatase;mRNA guanylyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 84.313 84.419 2 0.032702 97385 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 54.157 41.964 67520000 0 0 0 0 2641800 5506800 6395800 7133800 6853600 6177700 6582500 7932100 4622000 4171200 9502300 60519 450 54449 511292;511293;511294;511295;511296;511297;511298;511299;511300;511301;511302 405900 405900 1 YLLADCNEAFIK Unmodified 1455.7068 0.70680145 382 O60216 RAD21 Double-strand-break repair protein rad21 homolog yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 80.708 76.69 2 0.029566 95220 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 59.542 41.23 85229000 0 85229000 0 0 0 0 0 0 0 0 0 0 0 0 0 60520 382 54450 511303;511304 405901 405901 1 YLLDSCAPLLR Unmodified 1319.6908 0.69075746 3641 Q92616 GCN1L1 Translational activator GCN1 yes yes 0 0 0 By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 80.974 81.108 2 0.00057492 92952 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 93.551 56.075 84104000 0 0 0 0 0 11704000 4477100 8871500 6852600 11622000 0 8257900 6654000 9489700 16176000 60521 3641 54451 511305;511306;511307;511308;511309;511310;511311;511312;511313 405902;405903;405904;405905;405906;405907 405905 6 YLLDSNPTRK Unmodified 1205.6404 0.64043645 2594 Q15911;Q86UP3 ZFHX3;ZFHX4 Zinc finger homeobox protein 3;Zinc finger homeobox protein 4 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 35.966 35.097 3 0.01184 49621 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.043 37.371 56143000 19520000 0 0 4288400 2724900 8174100 4382200 4101500 0 7800800 0 0 0 5150600 0 60522 2594 54452 511314;511315;511316;511317;511318;511319;511320;511321 405908;405909;405910 405910 3 YLLDVLNK Unmodified 976.55933 0.55933258 3787 Q96CW5 TUBGCP3 Gamma-tubulin complex component 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 5 3.87 5 3 2 1 2 1 1 1 79.464 77.28 2 0.01803 98683 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.369 60.947 65000000 22788000 13645000 5016500 0 0 0 6326200 8833300 8390400 0 0 0 0 0 0 60523 3787 54453 511322;511323;511324;511325;511326;511327;511328;511329 405911;405912;405913 405912 3 YLLETSGNLDGLEYK Unmodified 1713.8461 0.8461317 1481 P43490 NAMPT Nicotinamide phosphoribosyltransferase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.21 3.75 4 1 9 1 3 1 1 1 1 1 1 1 1 1 1 80.956 79.212 2 3.0617E-56 98557 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 201.6 150.34 923530000 25972000 852030000 11104000 0 1829300 4103700 2342900 0 2445100 5286800 6432600 6122100 0 5869000 0 60524 1481 54454 511330;511331;511332;511333;511334;511335;511336;511337;511338;511339;511340;511341;511342;511343 405914;405915;405916;405917;405918;405919;405920;405921;405922;405923;405924;405925;405926 405918 13 YLLGDAPVSPSSQK Unmodified 1460.7511 0.75110911 4739 Q9NYB0 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 62.269 60.911 2 1.3089E-09 77221 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 150.86 111.84 160910000 0 147110000 0 0 0 0 0 5888600 3587600 4330400 0 0 0 0 0 60525 4739 54455 511344;511345;511346;511347 405927;405928;405929 405928 3 YLLGDMEGR Unmodified 1052.4961 0.4960804 2608 Q16531 DDB1 DNA damage-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 58.299 58.513 2 0.015207 66553 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 57.59 21.71 79916000 0 0 0 4282600 0 0 0 0 0 0 14114000 17521000 10272000 0 33727000 60526 2608 54456 511348;511349;511350;511351;511352 405930;405931;405932;405933 405931 3 YLLGTSLAR Unmodified 992.56548 0.56548059 737 P00966 ASS1 Argininosuccinate synthase yes yes 0 0 0 By MS/MS By matching By MS/MS By matching 10 0 4 1 1 1 1 63.037 63.432 2 0.012914 71742 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 60.59 7.9533 45513000 0 0 0 0 0 0 0 0 0 0 7951200 4622900 0 8289900 24649000 60527 737 54457 511353;511354;511355;511356 405934;405935 405935 2 YLLGTSLARPCIAR Unmodified 1589.8712 0.87118144 737 P00966 ASS1 Argininosuccinate synthase yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 72.257 72.536 3 0.019608 82742 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 32.275 11.813 68105000 0 0 0 0 0 0 0 0 0 0 6847800 9516600 0 6349200 45391000 60528 737 54458 511357;511358;511359;511360 405936 405936 1 YLLLASSPQDSR Unmodified 1348.6987 0.69867961 4482 Q9HA65 TBC1D17 TBC1 domain family member 17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 63.678 63.897 2 0.010813 72210 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.102 44.512 30883000 0 0 0 0 0 3604700 0 0 2301500 4794700 5443200 0 3371100 4205300 7162100 60529 4482 54459 511361;511362;511363;511364;511365;511366;511367 405937 405937 1 YLLLGAIHK Unmodified 1026.6226 0.62260154 3341 Q8N584 TTC39C Tetratricopeptide repeat protein 39C yes yes 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 67.279 67.632 2 0.035645 77703 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 46.016 38.665 9715100 0 0 0 0 0 0 0 0 0 3787400 0 2925500 0 0 3002200 60530 3341 54460 511368;511369;511370 405938 405938 1 YLLLNPK Unmodified 859.51674 0.51673948 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 59.646 59.897 2 0.032739 67254 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 72.618 8.3423 1279700000 0 0 0 0 0 110480000 134950000 118050000 84300000 125500000 131590000 175500000 127260000 120030000 152050000 60531 213 54461 511371;511372;511373;511374;511375;511376;511377;511378;511379;511380 405939;405940 405939 2 YLLNQGADVTLR Unmodified 1361.7303 0.73031409 2857 Q68DC2 ANKS6 Ankyrin repeat and SAM domain-containing protein 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 69.658 69.772 2 0.01397 80633 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 43.77 15.561 22318000 0 0 0 0 2110300 0 2469700 0 2935900 3765100 2515800 2280600 2649600 3590700 0 60532 2857 54462 511381;511382;511383;511384;511385;511386;511387;511388 405941;405942;405943 405943 3 YLLQEQLK Unmodified 1033.5808 0.5807963 1379 P36776 LONP1 Lon protease homolog, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7 3.87 3 5 1 1 1 1 1 1 1 1 59.11 57.02 2 0.0096192 63440 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 82.305 43.469 147750000 9071900 101570000 4083600 0 0 7198800 0 0 0 5586800 0 0 5392100 4586500 10263000 60533 1379 54463 511389;511390;511391;511392;511393;511394;511395;511396 405944;405945;405946;405947;405948 405946 5 YLLQPLGDFSR Unmodified 1307.6874 0.68738664 3087 Q7Z3U7 MON2 Protein MON2 homolog yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 83.599 83.708 2 0.0064345 96995 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 56.563 33.209 8258400 0 0 0 0 0 3221600 0 0 0 0 0 0 0 0 5036800 60534 3087 54464 511397;511398 405949 405949 1 YLLSQSSPAPLTAAEEELRQIK Unmodified 2443.2959 0.29585426 2190 Q12792 TWF1 Twinfilin-1 yes yes 0 0 1 By MS/MS By MS/MS 2.4 0.49 3 2 2 3 95.521 90.627 3 1.1931E-74 113363 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 144.92 133.67 339800000 83446000 256360000 0 0 0 0 0 0 0 0 0 0 0 0 0 60535 2190 54465 511399;511400;511401;511402;511403 405950;405951;405952;405953;405954;405955;405956 405950 7 YLLTMDK Unmodified 882.45209 0.45209032 4857 Q9UBT2 UBA2 SUMO-activating enzyme subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 51.802 52.222 2 0.03326 57869 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.138 12.498 41038000 0 0 0 0 0 2646300 0 0 0 0 6818700 5465300 0 5897400 20211000 60536 4857 54466 511404;511405;511406;511407;511408 405957;405958;405959 405957 3 YLLTPSMQK Unmodified 1079.5685 0.56851706 3727 Q969U7 PSMG2 Proteasome assembly chaperone 2 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 55.219 55.622 2 0.033277 62176 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 46.994 46.994 27712000 0 0 0 0 0 0 0 0 0 3899600 4405800 5451800 0 4425400 9529400 60537 3727 54467 511409;511410;511411;511412;511413 405960 405960 1 YLLVPAFQGALTMK Oxidation (M) 1566.848 0.84798638 1971 P78318 IGBP1 Immunoglobulin-binding protein 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 91.298 88.673 2 0.0054425 103440 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.001 36.277 13268000 6031900 0 0 0 0 0 0 0 0 1745700 0 0 0 0 5490200 60538 1971 54468 511414;511415;511416 405961;405962;405963 405961 3163 3 YLMDNLFK Unmodified 1042.5158 0.5157532 2220 Q12982 BNIP2 BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 yes yes 0 0 0 By MS/MS 10 0 1 1 81.164 81.379 2 0.015415 93812 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.915 52.761 7579500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7579500 60539 2220 54469 511417 405964 405964 1 YLMEEDEDAYK Oxidation (M) 1420.5704 0.57042713 1508 P46777 RPL5 60S ribosomal protein L5 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 35.409 35.801 2 0.00021262 39639 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 89.247 84.781 30396000 0 0 0 0 0 3367600 0 0 0 2519900 3758600 5465900 7312200 4082200 3889100 60540 1508 54470 511418;511419;511420;511421;511422;511423;511424;511425 405965;405966;405967;405968;405969;405970;405971 405965 2386 7 YLMEEDEDAYK Unmodified 1404.5755 0.57551251 1508 P46777 RPL5 60S ribosomal protein L5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 49.667 48.971 2 0.001413 61531 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.047 86.196 70425000 0 18106000 0 0 0 13905000 0 3448600 0 0 13164000 0 0 9714900 12087000 60541 1508 54470 511426;511427;511428;511429;511430;511431;511432;511433;511434;511435;511436 405972;405973;405974;405975;405976;405977;405978;405979;405980;405981 405974 10 YLMEEDEDAYKK Oxidation (M) 1548.6654 0.66539015 1508 P46777 RPL5 60S ribosomal protein L5 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 2 1 2 1 1 28.15 28.384 2;3 0.00011227 29578 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 79.492 78.025 245100000 0 0 0 21725000 19787000 13246000 0 17186000 11460000 32837000 31818000 47785000 0 17512000 31743000 60542 1508 54471 511437;511438;511439;511440;511441;511442;511443;511444;511445;511446;511447;511448 405982;405983;405984;405985;405986;405987;405988;405989;405990;405991;405992 405984 2386 8 YLMEEDEDAYKK Unmodified 1532.6705 0.67047553 1508 P46777 RPL5 60S ribosomal protein L5 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.041 40.221 3 7.6937E-08 44620 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 108.35 105.63 711070000 0 0 0 61237000 31867000 32852000 42766000 42222000 27100000 66444000 69631000 108380000 63703000 74417000 90450000 60543 1508 54471 511449;511450;511451;511452;511453;511454;511455;511456;511457;511458;511459;511460 405993;405994;405995;405996;405997 405995 1 YLMIEEYLTK Oxidation (M) 1317.6526 0.65264062 694 O95817 BAG3 BAG family molecular chaperone regulator 3 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 85.613 81.987 2 0.00078599 101966 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.71 98.446 19449000 0 18195000 1253400 0 0 0 0 0 0 0 0 0 0 0 0 60544 694 54472 511461;511462 405998 405998 841 1 YLMIEEYLTK Unmodified 1301.6577 0.65772599 694 O95817 BAG3 BAG family molecular chaperone regulator 3 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 92.468 85.947 2 0.0071364 109383 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.649 85.606 20668000 8499600 12168000 0 0 0 0 0 0 0 0 0 0 0 0 0 60545 694 54472 511463;511464 405999;406000 406000 2 YLNAGAGGIAGAFIHEK Unmodified 1687.8682 0.86820455 2629 Q16719 KYNU Kynureninase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 5 3.74 7 2 5 4 4 1 1 1 1 1 1 79.372 76.724 2;3 4.0361E-54 98779 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 165.73 140.49 530370000 299530000 146530000 4342300 0 0 1147800 0 0 0 0 7366500 7502500 0 6008700 57951000 60546 2629 54473 511465;511466;511467;511468;511469;511470;511471;511472;511473;511474;511475;511476;511477;511478 406001;406002;406003;406004;406005;406006;406007;406008;406009;406010;406011 406008 11 YLNEAAGVAAEEAR Unmodified 1462.7052 0.70522155 3295 Q8IZH2 XRN1 5'-3' exoribonuclease 1 yes yes 0 0 0 By matching By matching By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 10 0 14 1 2 1 1 1 2 1 1 2 1 1 49.635 49.734 2 0.00068532 55262 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 64.439 28.014 192650000 0 0 0 5658300 19129000 13591000 16744000 11479000 31409000 18363000 0 14125000 35175000 15842000 11137000 60547 3295 54474 511479;511480;511481;511482;511483;511484;511485;511486;511487;511488;511489;511490;511491;511492 406012;406013;406014;406015 406013 2 YLNEAAGVAAEEARNYK Unmodified 1867.9064 0.90644055 3295 Q8IZH2 XRN1 5'-3' exoribonuclease 1 yes yes 0 0 1 By MS/MS 2 0 1 1 64.327 60.571 3 0.0004589 75119 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 63.145 52.981 15415000 0 0 15415000 0 0 0 0 0 0 0 0 0 0 0 0 60548 3295 54475 511493 406016 406016 1 YLNFFTK Unmodified 931.48035 0.48035398 959 P12004 PCNA Proliferating cell nuclear antigen yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 74.415 74.487 2 0.028921 86113 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 76.134 62.359 752390000 0 0 0 22353000 19036000 0 20491000 32437000 20248000 33887000 108330000 68706000 28028000 66887000 331990000 60549 959 54476 511494;511495;511496;511497;511498;511499;511500;511501;511502;511503;511504 406017;406018;406019;406020 406020 3 YLNNVVEQLK Unmodified 1218.6608 0.66083754 2261 Q13257 MAD2L1 Mitotic spindle assembly checkpoint protein MAD2A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 1 4 1 1 1 1 1 67.995 67.09 2 0.00086291 75704 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 118.5 70.212 114980000 0 78533000 0 0 0 0 0 0 3913700 10779000 0 0 0 9772700 11981000 60550 2261 54477 511505;511506;511507;511508;511509 406021;406022;406023;406024 406022 4 YLNSVQYIEELQK Unmodified 1625.8301 0.83008771 3188 Q86X27 RALGPS2 Ras-specific guanine nucleotide-releasing factor RalGPS2 yes yes 0 0 0 By MS/MS 2 0 1 1 85.832 81.057 2 4.6769E-21 100755 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 141.89 105.94 38552000 0 38552000 0 0 0 0 0 0 0 0 0 0 0 0 0 60551 3188 54478 511510 406025 406025 1 YLNTQFIK Unmodified 1025.5546 0.55458155 2329 Q13617 CUL2 Cullin-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.839 58.951 2 0.025168 67861 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 58.917 25.367 60893000 0 0 0 2136200 1955300 8699100 3467900 3714900 2672400 5312400 4799500 5716200 4135600 5597100 12687000 60552 2329 54479 511511;511512;511513;511514;511515;511516;511517;511518;511519;511520;511521;511522 406026;406027 406027 2 YLNWIGVPTK Unmodified 1189.6495 0.64954457 433;2640 O60825;Q16875 PFKFB2;PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase;6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.95 80.009 2 0.0082907 92420 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 60.398 44.065 73654000 0 0 0 3584200 3991400 8911000 4848200 8610800 5506800 7630600 5676700 6356500 3959700 4220300 10358000 60553 433;2640 54480 511523;511524;511525;511526;511527;511528;511529;511530;511531;511532;511533;511534 406028;406029;406030;406031;406032;406033 406028 6 YLPALDEFPHPPK Unmodified 1522.782 0.78201531 1794 P57678 GEMIN4 Gem-associated protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 8.22 3.33 4 14 2 1 1 2 1 1 1 1 1 1 2 1 2 1 80.137 78.852 2;3 0.0011805 90715 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 50.563 46.678 248470000 62098000 62878000 19630000 8095400 5755700 12373000 5025400 6964800 14080000 9267200 0 13909000 5980800 9845500 12569000 60554 1794 54481 511535;511536;511537;511538;511539;511540;511541;511542;511543;511544;511545;511546;511547;511548;511549;511550;511551;511552 406034;406035;406036;406037;406038;406039;406040;406041;406042 406039 9 YLPALGYSK Unmodified 1010.5437 0.54368251 1740 P54577 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59.948 58.748 2 0.02892 66633 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 48.794 32.5 1681000000 720190000 702270000 31803000 9751500 7833900 14898000 11090000 9877800 7336800 14520000 28310000 25461000 0 25472000 72177000 60555 1740 54482 511553;511554;511555;511556;511557;511558;511559;511560;511561;511562;511563;511564;511565;511566 406043;406044;406045;406046 406045 3 YLPALQGCR Unmodified 1076.5437 0.54369929 1118;5069 P21127;Q9UQ88 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A no no 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 50.159 50.126 2 0.017056 56650 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 56.011 43.183 17356000 0 0 0 3655200 0 0 0 0 0 0 0 0 7534000 6167200 0 60556 1118;5069 54483 511567;511568;511569 406047;406048 406048 2 YLPDIIK Unmodified 860.50076 0.50075507 275 O15355 PPM1G Protein phosphatase 1G yes yes 0 0 0 By MS/MS 2 0 1 1 74.223 69.068 2 0.033071 86569 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 86.086 29.576 940480000 0 940480000 0 0 0 0 0 0 0 0 0 0 0 0 0 60557 275 54484 511570 406049 406049 1 YLPELMAEK Oxidation (M) 1108.5474 0.54744726 2138 Q07666;Q5VWX1;O75525 KHDRBS1;KHDRBS2;KHDRBS3 KH domain-containing, RNA-binding, signal transduction-associated protein 1;KH domain-containing, RNA-binding, signal transduction-associated protein 2;KH domain-containing, RNA-binding, signal transduction-associated protein 3 yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 54.56 53.151 2 0.0033412 61520 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 84.498 84.498 1861500000 29927000 854190000 40293000 65086000 66503000 0 106580000 55575000 58675000 91532000 74728000 122860000 97870000 82085000 115600000 60558 2138 54485 511571;511572;511573;511574;511575;511576;511577;511578;511579;511580;511581;511582;511583;511584;511585 406050;406051;406052;406053;406054;406055;406056;406057;406058;406059;406060;406061 406060 3442 12 YLPELMAEK Unmodified 1092.5525 0.55253264 2138 Q07666;Q5VWX1;O75525 KHDRBS1;KHDRBS2;KHDRBS3 KH domain-containing, RNA-binding, signal transduction-associated protein 1;KH domain-containing, RNA-binding, signal transduction-associated protein 2;KH domain-containing, RNA-binding, signal transduction-associated protein 3 yes no 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 73.171 67.422 2 0.01196 86356 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.498 84.498 1800800000 48045000 1723500000 29330000 0 0 0 0 0 0 0 0 0 0 0 0 60559 2138 54485 511586;511587;511588 406062;406063 406062 2 YLPENDLK Unmodified 990.50221 0.50221163 176 O00743 PPP6C Serine/threonine-protein phosphatase 6 catalytic subunit;Serine/threonine-protein phosphatase 6 catalytic subunit, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38.651 37.763 2 0.01026 41791 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 80.229 26.024 954870000 30423000 701770000 8013900 8522400 10415000 14730000 12600000 11718000 9741400 15270000 22148000 33023000 17584000 22726000 36186000 60560 176 54486 511589;511590;511591;511592;511593;511594;511595;511596;511597;511598;511599;511600;511601;511602;511603 406064;406065;406066;406067;406068;406069;406070 406067 7 YLPGPLQDMLK Unmodified 1273.674 0.67404476 218 O14810 CPLX1 Complexin-1 yes yes 0 0 0 By MS/MS 2 0 1 1 93.358 85.227 2 0.038639 110372 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.034 30.93 7963900 7963900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60561 218 54487 511604 406071 406071 1 YLPHSAGR Unmodified 899.46135 0.46134987 1512 P46782 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 1 2 1 1 11.489 11.64 2 0.006213 10735 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 102.77 88.616 808940000 0 0 0 42130000 40392000 43361000 38380000 35333000 40356000 67329000 43771000 134220000 114380000 103530000 105760000 60562 1512 54488 511605;511606;511607;511608;511609;511610;511611;511612;511613;511614;511615;511616;511617 406072;406073;406074;406075;406076;406077;406078;406079;406080 406078 5 YLPHSAGRYAAK Unmodified 1332.6939 0.693869 1512 P46782 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes yes 0 0 1 By MS/MS 2 0 1 1 28.406 22.887 3 0.034997 32317 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 36.32 25.772 15584000 15584000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60563 1512 54489 511618 406081 406081 1 YLPSIINDVK Unmodified 1160.6441 0.64412484 4433 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 80.709 77.07 2 0.0065059 95788 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.75 5.4329 133260000 0 126810000 6445500 0 0 0 0 0 0 0 0 0 0 0 0 60564 4433 54490 511619;511620 406082;406083;406084;406085 406082 4 YLPTIVNDVK Unmodified 1160.6441 0.64412484 2386 Q14185 DOCK1 Dedicator of cytokinesis protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 77.565 71.03 2 0.022926 88708 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.823 5.2333 153560000 79566000 73989000 0 0 0 0 0 0 0 0 0 0 0 0 0 60565 2386 54491 511621;511622 406086 406086 1 YLQAEAVK Unmodified 920.49673 0.49673232 4400 Q9H4L4 SENP3 Sentrin-specific protease 3 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS 7.5 3.55 1 1 4 2 1 1 1 1 28.123 26.767 2 0.023266 29091 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 60.478 23.384 84772000 0 61178000 0 0 0 0 1190500 0 376420 8317800 0 0 13709000 0 0 60566 4400 54492 511623;511624;511625;511626;511627;511628 406087;406088;406089 406089 3 YLQAIMDSNAQSHK Oxidation (M) 1620.7566 0.75660519 2327 Q13614 MTMR2 Myotubularin-related protein 2 yes yes 0 1 0 By MS/MS 2 0 1 1 36.677 31.762 3 0.011837 41642 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 46.797 32.111 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60567 2327 54493 511629 406090 406090 3790 1 YLQAIMDSNAQSHK Unmodified 1604.7617 0.76169057 2327 Q13614 MTMR2 Myotubularin-related protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6 4 3 3 2 1 1 1 1 49.579 46.302 2;3 0.00024862 64085 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.956 60.568 88204000 62183000 0 9164700 0 5085300 0 0 0 0 0 0 0 0 2925100 8845800 60568 2327 54493 511630;511631;511632;511633;511634;511635 406091;406092;406093;406094 406092 3 YLQDALGEFIK Unmodified 1295.6762 0.67615325 2826 Q5VWQ8 DAB2IP Disabled homolog 2-interacting protein yes yes 0 0 0 By MS/MS 2 0 1 1 90.64 85.744 2 0.001293 106544 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.108 59.923 13536000 0 13536000 0 0 0 0 0 0 0 0 0 0 0 0 0 60569 2826 54494 511636 406095 406095 1 YLQECLSK Unmodified 1039.5008 0.50083142 3582 Q8WXA3 RUFY2 RUN and FYVE domain-containing protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 36.766 31.851 2 0.017927 41783 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.55 28.762 27590000 0 27590000 0 0 0 0 0 0 0 0 0 0 0 0 0 60570 3582 54495 511637 406096;406097 406097 2 YLQEEVNINRK Unmodified 1404.7361 0.73612775 4898 Q9UHD8 SEPT9 Septin-9 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 38.645 38.831 3 0.00010269 42902 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 101.38 85.491 109220000 0 0 0 6707300 7383000 7403100 8010000 0 0 12017000 16271000 15291000 10424000 9860500 15853000 60571 4898 54496 511638;511639;511640;511641;511642;511643;511644;511645;511646;511647 406098;406099;406100;406101;406102;406103;406104;406105;406106;406107 406102 10 YLQEHPEDQEK Unmodified 1414.6365 0.63647328 4433 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.21 3.75 4 1 9 2 3 1 1 1 1 1 1 1 1 1 16.365 15.075 2;3 2.8843E-28 19848 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 195.27 178.04 167900000 8012100 63310000 0 0 6792700 8904000 9414300 8146700 0 9379100 14335000 11851000 0 14847000 12911000 60572 4433 54497 511648;511649;511650;511651;511652;511653;511654;511655;511656;511657;511658;511659;511660;511661 406108;406109;406110;406111;406112 406109 5 YLQEIYNSNNQK Unmodified 1512.7209 0.72087161 759 P02679 FGG Fibrinogen gamma chain yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 43.999 43.812 2 4.8572E-43 48980 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 179.51 148.82 21032000 0 0 0 5831000 0 0 0 15201000 0 0 0 0 0 0 0 60573 759 54498 511662;511663 406113;406114 406113 2 YLQEQAYR Unmodified 1069.5193 0.51925868 2833 Q5VZK9 LRRC16A Leucine-rich repeat-containing protein 16A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 28.035 28.168 2 0.012884 30377 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 73.616 27.246 62850000 0 0 0 0 5472200 9671400 7830300 0 5541900 9433800 9155800 0 8248300 7497000 0 60574 2833 54499 511664;511665;511666;511667;511668;511669;511670;511671;511672 406115;406116;406117;406118 406117 4 YLQESLLK Unmodified 992.55425 0.5542472 1187 P25391 LAMA1 Laminin subunit alpha-1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 55.345 55.514 2 0.01661 63379 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 66.993 6.6349 33173000 0 0 0 0 2527100 3259400 0 2550600 2815800 4399900 4579600 0 4241600 3203400 5595900 60575 1187 54500 511673;511674;511675;511676;511677;511678;511679;511680;511681 406119;406120;406121;406122;406123;406124;406125;406126 406124 8 YLQETYSK Unmodified 1030.4971 0.49712625 179 O00762 UBE2C Ubiquitin-conjugating enzyme E2 C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 2 1 1 1 1 1 1 1 1 1 1 1 1 24.858 24.192 1;2 0.011003 25709 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 77.923 39.131 326530000 0 239810000 1857500 7514500 3794100 9602200 8756800 4720300 0 8382600 6548300 8754200 6432700 6053900 14300000 60576 179 54501 511682;511683;511684;511685;511686;511687;511688;511689;511690;511691;511692;511693;511694;511695 406127;406128;406129;406130;406131;406132;406133;406134;406135;406136;406137;406138;406139 406136 13 YLQHHIK Unmodified 937.51339 0.51338544 3898 Q96JP5 ZFP91 E3 ubiquitin-protein ligase ZFP91 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching 10 0 5 1 1 1 1 1 7.7457 7.9748 2 0.027575 6473 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 77.374 53.188 42079000 0 0 0 0 0 0 0 0 0 3855600 0 11442000 13099000 6205100 7477300 60577 3898 54502 511696;511697;511698;511699;511700 406140;406141;406142 406141 3 YLQLQQEK Unmodified 1048.5553 0.55530983 158 O00461 GOLIM4 Golgi integral membrane protein 4 yes yes 0 0 0 By MS/MS 2 0 1 1 39.375 34.363 2 0.0096686 44678 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 113.89 60.335 28135000 0 28135000 0 0 0 0 0 0 0 0 0 0 0 0 0 60578 158 54503 511701 406143 406143 1 YLQQAFEK Unmodified 1025.5182 0.51819605 5127 Q9Y2X9 ZNF281 Zinc finger protein 281 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 40.287 40.223 2 0.013039 45127 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 73.26 36.239 19075000 0 0 0 0 7134800 0 0 5628900 6311000 0 0 0 0 0 0 60579 5127 54504 511702;511703;511704;511705 406144;406145;406146;406147 406147 4 YLQQIFESQR Unmodified 1310.6619 0.66190017 3856 Q96GM5 SMARCD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.166 67.249 2 0.0014814 76960 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 92.439 69.699 67076000 0 0 0 3286300 2949400 4110800 5056300 3411900 3845700 6069300 4924200 9095900 6550000 7855400 9920700 60580 3856 54505 511706;511707;511708;511709;511710;511711;511712;511713;511714;511715;511716;511717 406148;406149;406150;406151;406152;406153;406154;406155;406156;406157;406158;406159;406160 406150 13 YLQQLAEK Unmodified 991.53385 0.53384611 2053 Q01433 AMPD2 AMP deaminase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 36.122 36.36 2 0.039356 40800 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 58.815 25.299 49337000 0 0 0 0 2101000 2462000 3325800 0 2709700 4668800 4887700 9139700 0 5359900 14683000 60581 2053 54506 511718;511719;511720;511721;511722;511723;511724;511725;511726 406161;406162;406163 406163 3 YLQSNSNNWR Unmodified 1280.5898 0.58979786 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 32.748 33.47 2 1.0472E-05 35549 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 146.81 92.653 31494000 0 0 0 0 0 0 0 0 0 0 0 13855000 0 0 17639000 60582 3119 54507 511727;511728;511729;511730 406164;406165;406166;406167 406164 4 YLQTIMDANAQSHK Unmodified 1618.7773 0.77734063 2326 Q13613 MTMR1 Myotubularin-related protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 4 2 2 56.449 49.452 2;3 1.9249E-11 64462 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.77 102.91 103620000 55523000 48096000 0 0 0 0 0 0 0 0 0 0 0 0 0 60583 2326 54508 511731;511732;511733;511734 406168;406169;406170;406171 406169 3 YLQTVQYGVHGNFPR Unmodified 1777.89 0.89000263 2411 Q14527 HLTF Helicase-like transcription factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 2 1 1 1 1 1 1 1 1 2 62.603 62.788 2;3 1.2538E-10 71053 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 119.16 89.348 393930000 0 0 0 0 13935000 49114000 16321000 39902000 20920000 34876000 47524000 51106000 0 29504000 90726000 60584 2411 54509 511735;511736;511737;511738;511739;511740;511741;511742;511743;511744;511745;511746;511747 406172;406173;406174;406175;406176;406177;406178;406179;406180;406181;406182;406183;406184;406185;406186;406187;406188;406189;406190 406178 19 YLQTYGEWNR Unmodified 1328.6149 0.61494998 4266 Q9BZH6 WDR11 WD repeat-containing protein 11 yes yes 0 0 0 By MS/MS 10 0 1 1 55.305 55.93 2 0.023497 62739 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.436 44.555 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60585 4266 54510 511748 406191 406191 1 YLRDVNCPFK Unmodified 1310.6441 0.64414162 5076 Q9Y224 C14orf166 UPF0568 protein C14orf166 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 47.006 46.533 3 0.0013257 52024 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 76.143 63.135 302070000 67798000 0 0 11064000 9899800 15094000 14666000 13942000 16987000 17461000 25443000 32662000 22003000 17979000 37066000 60586 5076 54511 511749;511750;511751;511752;511753;511754;511755;511756;511757;511758;511759;511760;511761 406192;406193;406194;406195;406196;406197;406198;406199;406200;406201;406202 406197 10 YLRIPDEIIDMVK Oxidation (M) 1619.8593 0.85927935 5214 Q9Y4Z0 LSM4 U6 snRNA-associated Sm-like protein LSm4 yes yes 0 1 1 By MS/MS 2 0 1 1 88.893 80.763 3 0.0070787 105060 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.947 47.528 10061000 10061000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60587 5214 54512 511762 406203 406203 6614 1 YLRIPDEIIDMVK Unmodified 1603.8644 0.86436473 5214 Q9Y4Z0 LSM4 U6 snRNA-associated Sm-like protein LSm4 yes yes 0 0 1 By MS/MS 2 0 1 1 96.766 88.635 3 0.0025839 114495 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.215 47.485 8784200 8784200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60588 5214 54512 511763 406204 406204 1 YLRLDGTTK Unmodified 1065.5819 0.58185893 1656 P51532 SMARCA4 Transcription activator BRG1 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 36.271 31.369 2 0.011954 44127 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 128.6 63.35 61166000 56006000 0 5160500 0 0 0 0 0 0 0 0 0 0 0 0 60589 1656 54513 511764;511765 406205 406205 0 YLRNLDPNSAYYDPK Unmodified 1827.8792 0.87916317 652 O95391 SLU7 Pre-mRNA-splicing factor SLU7 yes yes 0 0 1 By MS/MS 2 0 1 1 66.402 58.107 3 0.0338 77988 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 32.692 23.684 12479000 12479000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60590 652 54514 511766 406206 406206 1 YLRSVGDGETVEFDVVEGEK Unmodified 2227.0645 0.064457335 1955;1044 P67809;P16989 YBX1;YBX3 Nuclease-sensitive element-binding protein 1;Y-box-binding protein 3 no no 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 4 2 1 1 78.979 73.057 2;3 3.6445E-46 94189 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 150.59 129.04 207380000 158440000 38422000 10511000 0 0 0 0 0 0 0 0 0 0 0 0 60591 1955;1044 54515 511767;511768;511769;511770 406207;406208;406209;406210;406211 406209 5 YLSATTGFGR Unmodified 1071.5349 0.53490874 1787 P56937 HSD17B7 3-keto-steroid reductase yes yes 0 0 0 By MS/MS 10 0 1 1 47.816 47.979 2 0.030505 54113 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 57.931 40.164 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60592 1787 54516 511771 406212 406212 1 YLSDNVHLVCEETANYLVIWCIDLEVEEK Unmodified 3552.6793 0.67927266 2612 Q16543 CDC37 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.43 0.495 4 3 4 2 1 100.29 96.001 3;4 6.6351E-61 119777 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 100.95 95.841 64506000 49868000 11525000 3113700 0 0 0 0 0 0 0 0 0 0 0 0 60593 2612 54517 511772;511773;511774;511775;511776;511777;511778 406213;406214;406215;406216;406217;406218;406219;406220;406221 406219 9 YLSELAEQPERK Unmodified 1461.7464 0.74635808 4440 Q9H7Z6 KAT8 Histone acetyltransferase KAT8 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 42.422 41.034 3 0.0012625 45562 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 46.159 32.075 222390000 11308000 44707000 31704000 0 10651000 0 11315000 12968000 10323000 17053000 15694000 17123000 12635000 12423000 14487000 60594 4440 54518 511779;511780;511781;511782;511783;511784;511785;511786;511787;511788;511789;511790;511791;511792 406222;406223;406224;406225;406226;406227;406228;406229;406230;406231;406232;406233;406234;406235;406236;406237;406238;406239 406225 17 YLSEVASGDNK Unmodified 1181.5564 0.55643205 1311 P31946 YWHAB 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26.768 26.22 2 1.2607E-05 27753 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 128.6 118.68 997210000 11594000 248190000 0 31389000 16722000 44061000 26118000 25148000 13615000 44570000 121980000 118360000 26548000 65726000 203200000 60595 1311 54519 511793;511794;511795;511796;511797;511798;511799;511800;511801;511802;511803;511804;511805;511806 406240;406241;406242;406243;406244;406245;406246;406247;406248;406249;406250;406251;406252;406253;406254 406252 14 YLSFTPPEK Unmodified 1080.5492 0.54916182 2248 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 62.665 61.282 2 0.0030441 78170 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 116.37 98.523 607700000 21691000 372880000 9915000 0 8325700 17306000 13444000 14687000 9241500 19770000 18611000 29991000 12914000 20548000 38376000 60596 2248 54520 511807;511808;511809;511810;511811;511812;511813;511814;511815;511816;511817;511818;511819;511820;511821 406255;406256;406257;406258;406259;406260;406261;406262;406263;406264;406265;406266;406267;406268;406269;406270;406271 406259 17 YLSLEQK Unmodified 879.47018 0.47018322 2495 Q15075 EEA1 Early endosome antigen 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 40.104 35.803 2 0.02375 46673 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 104.11 6.5147 381140000 0 375090000 6051400 0 0 0 0 0 0 0 0 0 0 0 0 60597 2495 54521 511822;511823 406272 406272 1 YLSLGEHDRK Unmodified 1216.62 0.62003536 3590 Q8WXG6 MADD MAP kinase-activating death domain protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 21.73 22.219 3 0.014406 22556 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 46.844 33.889 24426000 0 0 0 0 0 0 0 5042300 0 0 0 10679000 0 0 8705200 60598 3590 54522 511824;511825;511826 406273 406273 1 YLSLHDNK Unmodified 988.49779 0.49779495 2984 Q6UXN9 WDR82 WD repeat-containing protein 82 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 21.92 22.205 2 0.0067154 22345 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 98.523 58.566 65772000 0 0 0 0 11168000 0 0 14377000 0 0 0 21646000 0 0 18581000 60599 2984 54523 511827;511828;511829;511830 406274;406275 406275 2 YLSLLYPAR Unmodified 1094.6124 0.61243078 4969 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 78.171 78.237 2 0.0042856 89895 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.323 47.054 21914000 0 0 0 1495800 0 0 2189200 0 0 3449100 0 3778700 2976800 2707700 5316600 60600 4969 54524 511831;511832;511833;511834;511835;511836;511837;511838;511839 406276;406277;406278;406279;406280;406281 406277 6 YLSNAYAR Unmodified 956.47158 0.4715802 140 O00299 CLIC1 Chloride intracellular channel protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.164 27.361 2 0.010595 28091 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 79.146 53.319 367070000 0 0 0 12162000 7987000 9933000 11015000 13053000 7067900 12073000 57713000 38565000 12799000 32173000 152520000 60601 140 54525 511840;511841;511842;511843;511844;511845;511846;511847;511848;511849;511850;511851 406282;406283;406284;406285;406286;406287;406288;406289;406290 406288 7 YLSNLQNGMPLLK Unmodified 1489.7963 0.79628516 1638 P50851 LRBA Lipopolysaccharide-responsive and beige-like anchor protein yes yes 0 0 0 By MS/MS 2 0 1 1 86.847 78.717 2 0.024724 102633 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.016 51.792 4608700 4608700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60602 1638 54526 511852 406291 406291 1 YLSQQWAK Unmodified 1022.5185 0.5185304 992 P13984 GTF2F2 General transcription factor IIF subunit 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40.368 39.756 2 0.0024386 53094 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 124.89 98.993 418030000 229530000 0 7667800 10451000 9260300 12040000 10337000 10927000 11564000 19531000 22139000 18333000 17778000 13252000 25220000 60603 992 54527 511853;511854;511855;511856;511857;511858;511859;511860;511861;511862;511863;511864;511865;511866 406292;406293;406294 406293 2 YLSQTHTNHEDK Unmodified 1471.6692 0.66917039 5193 Q9Y4C1 KDM3A Lysine-specific demethylase 3A yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 6.3993 6.5241 3 6.6251E-06 3431 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 108.56 79.588 93290000 0 0 0 4204900 6237800 5789100 6068100 8582600 6478500 9027200 14897000 6425900 11642000 8794200 5143200 60604 5193 54528 511867;511868;511869;511870;511871;511872;511873;511874;511875;511876;511877;511878 406295;406296;406297;406298;406299;406300;406301;406302;406303;406304;406305 406302 11 YLSSVSR Unmodified 810.42357 0.42356738 2299 Q13487 SNAPC2 snRNA-activating protein complex subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 19.381 19.579 2 0.048847 20237 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 64.803 49.035 50152000 0 0 0 4118900 3528400 3521200 4502300 3174400 3229500 4332100 4248500 6176600 4962500 3942800 4414500 60605 2299 54529 511879;511880;511881;511882;511883;511884;511885;511886;511887;511888;511889;511890 406306 406306 1 YLTAEAFGFK Unmodified 1145.5757 0.57571092 2626 Q16658 FSCN1 Fascin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 5.33 3.82 7 2 6 3 4 2 1 1 1 1 1 1 80.86 78.203 1;2 2.6724E-31 98047 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 220.51 151.31 4577000000 2040600000 1666600000 548550000 0 2131800 0 0 0 0 0 39038000 35166000 3678000 40499000 200760000 60606 2626 54530 511891;511892;511893;511894;511895;511896;511897;511898;511899;511900;511901;511902;511903;511904;511905 406307;406308;406309;406310;406311;406312;406313;406314;406315;406316;406317;406318;406319;406320;406321;406322;406323;406324 406310 16 YLTEHPDPNNENIVGYNNK Unmodified 2230.0291 0.029074882 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 52.802 52.917 3 3.3772E-31 59713 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 108.18 105.09 239280000 0 0 0 11237000 11661000 19437000 14353000 17618000 13360000 22618000 0 39745000 34091000 20567000 34594000 60607 2930 54531 511906;511907;511908;511909;511910;511911;511912;511913;511914;511915;511916 406325;406326;406327;406328;406329;406330;406331;406332;406333;406334;406335;406336;406337 406327 13 YLTGTYVQEESPEGGR Unmodified 1784.8217 0.82170787 3943 Q96P47 AGAP3 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 no no 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 51.436 51.518 2 5.2355E-09 57092 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 118.48 95.566 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60608 3943 54532 511917;511918 406338;406339 406338 2 YLTNAYSRDEFTNTCPSDK Unmodified 2280.9957 0.99572584 5270 Q9Y696 CLIC4 Chloride intracellular channel protein 4 yes yes 0 0 1 By matching By MS/MS 10 0 2 1 1 52.826 53.202 3 0.0001481 59521 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 55.267 51.879 21378000 0 0 0 0 0 0 2503400 0 0 0 0 0 0 0 18875000 60609 5270 54533 511919;511920 406340 406340 1 YLTNEREPYAPGTEGNVK Unmodified 2036.9803 0.98033378 674 O95625 ZBTB11 Zinc finger and BTB domain-containing protein 11 yes yes 0 0 1 By MS/MS 10 0 1 1 44.859 44.346 3 0.0019891 50244 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 30.593 19.479 12355000 0 0 0 0 12355000 0 0 0 0 0 0 0 0 0 0 60610 674 54534 511921 406341 406341 1 YLTPQLPPVPIIPEHK Unmodified 1841.0451 0.045106284 2351 Q13887 KLF5 Krueppel-like factor 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 87.423 86.733 3 0.0005364 100465 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.191 38.441 51433000 5659500 0 0 0 0 3577200 0 3246900 4914400 5881200 4375100 4856100 1806300 3012800 14103000 60611 2351 54535 511922;511923;511924;511925;511926;511927;511928;511929;511930;511931 406342;406343;406344;406345;406346;406347;406348;406349;406350;406351;406352;406353 406345 12 YLTQVATGQPHEGSSYSSR Unmodified 2066.9657 0.96574634 4790 Q9P086 MED11 Mediator of RNA polymerase II transcription subunit 11 yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 39.475 39.833 3 0.0067482 43773 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 23.027 19.365 10388000 0 0 0 0 0 0 0 3516100 0 2209500 0 4662600 0 0 0 60612 4790 54536 511932;511933;511934 406354 406354 1 YLTQVATGQPHEGSSYSSRK Unmodified 2195.0607 0.060709362 4790 Q9P086 MED11 Mediator of RNA polymerase II transcription subunit 11 yes yes 0 0 1 By MS/MS By matching By MS/MS 10 0 3 1 1 1 32.998 33.496 4 0.018405 36494 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 13.731 6.2791 21346000 0 0 0 0 0 0 0 0 0 0 6630200 0 0 3229900 11486000 60613 4790 54537 511935;511936;511937 406355 406355 1 YLTSNTAYGK Unmodified 1116.5451 0.54513908 3511 Q8TE04 PANK1 Pantothenate kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 27.956 28.072 2 0.0010435 30378 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 110.41 89.853 228720000 0 0 0 28811000 58583000 51361000 0 0 0 20735000 26559000 42670000 0 0 0 60614 3511 54538 511938;511939;511940;511941;511942;511943 406356;406357;406358;406359;406360;406361;406362 406362 7 YLTSNVAYGSTGIR Unmodified 1500.7573 0.75725712 4257;4466 Q9BZ23;Q9H999 PANK2;PANK3 Pantothenate kinase 2, mitochondrial;Pantothenate kinase 3 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 58.14 58.128 2 1.4315E-11 66933 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 123.67 123.67 180150000 0 0 0 18175000 40894000 36957000 0 0 0 22464000 23427000 38236000 0 0 0 60615 4257;4466 54539 511944;511945;511946;511947;511948;511949 406363;406364;406365;406366;406367;406368;406369 406368 7 YLTTAVITNK Unmodified 1122.6285 0.62847478 1809 P60228 EIF3E Eukaryotic translation initiation factor 3 subunit E yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 51.533 51.682 2 0.0015959 58297 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 93.649 65.475 358020000 0 0 0 17771000 18733000 19825000 24246000 25683000 17394000 38335000 33504000 38343000 29273000 33020000 61897000 60616 1809 54540 511950;511951;511952;511953;511954;511955;511956;511957;511958;511959;511960;511961 406370;406371;406372;406373;406374;406375;406376;406377;406378;406379;406380;406381;406382 406371 13 YLTTSLFPR Unmodified 1096.5917 0.59169534 2020 P86791;P86790 CCZ1;CCZ1B Vacuolar fusion protein CCZ1 homolog;Vacuolar fusion protein CCZ1 homolog B yes no 0 0 0 By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.068 76.107 2 0.0071238 87789 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 73.26 44.111 28339000 0 0 0 1538800 1461500 2272600 1961200 2116900 1729100 4672700 3223700 4599600 2202300 2560500 0 60617 2020 54541 511962;511963;511964;511965;511966;511967;511968;511969;511970;511971;511972;511973 406383;406384;406385;406386;406387;406388;406389 406389 7 YLTVAAVFR Unmodified 1038.5862 0.58621603 1963;842 P07437;P68371 TUBB;TUBB4B Tubulin beta chain;Tubulin beta-4B chain no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 2 2 2 1 2 2 2 2 1 1 1 81.22 81.288 2 0.00086208 92566 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 143.85 99.242 1344200000 0 0 0 17078000 52580000 90508000 77508000 64969000 94268000 174020000 127620000 176850000 80154000 111410000 277270000 60618 842;1963 54542 511974;511975;511976;511977;511978;511979;511980;511981;511982;511983;511984;511985;511986;511987;511988;511989;511990;511991;511992 406390;406391;406392;406393;406394;406395;406396;406397;406398;406399;406400;406401;406402;406403;406404;406405;406406;406407;406408;406409;406410;406411;406412;406413;406414;406415;406416;406417;406418;406419;406420;406421;406422;406423 406402 34 YLTVATVFR Unmodified 1068.5968 0.59678072 4160;2306 Q13509;Q9BUF5 TUBB3;TUBB6 Tubulin beta-3 chain;Tubulin beta-6 chain no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 78.512 78.57 2 0.00069849 91069 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 144.38 95.871 438420000 0 0 0 20628000 22993000 31443000 33068000 31309000 26139000 46722000 33426000 50647000 31885000 35081000 75081000 60619 2306;4160 54543 511993;511994;511995;511996;511997;511998;511999;512000;512001;512002;512003;512004 406424;406425;406426;406427;406428;406429;406430;406431;406432;406433;406434;406435;406436 406433 13 YLTWASR Unmodified 895.4552 0.45520186 751;752 P01876;P01877 IGHA1;IGHA2 Ig alpha-1 chain C region;Ig alpha-2 chain C region no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 49.425 49.465 2 0.022521 55521 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 104.8 82.177 144720000 0 0 0 12206000 0 0 4647600 10779000 0 105490000 11592000 0 0 0 0 60620 751;752 54544 512005;512006;512007;512008;512009 406437;406438 406437 2 YLVAANLK Unmodified 890.52255 0.52255314 3621 Q92547 TOPBP1 DNA topoisomerase 2-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 49.813 50.165 2 0.038929 55782 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 50.855 24.059 28078000 0 0 0 0 0 0 0 4483300 0 0 0 0 4955800 7997700 10641000 60621 3621 54545 512010;512011;512012;512013 406439 406439 1 YLVELGCIK Unmodified 1093.5842 0.58416712 1683 P52294 KPNA1 Importin subunit alpha-5;Importin subunit alpha-5, N-terminally processed yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By MS/MS By matching 8.86 2.8 1 6 1 1 1 1 1 1 1 75.597 75.323 2 0.018501 85951 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 54.776 19.845 18813000 0 0 2883700 0 2274600 0 0 0 1306500 0 2455100 3854300 0 2777600 3261000 60622 1683 54546 512014;512015;512016;512017;512018;512019;512020 406440;406441 406441 2 YLVLANMLMK 2 Oxidation (M) 1226.6403 0.64030179 1838 P61201 COPS2 COP9 signalosome complex subunit 2 yes yes 0 2 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 68.313 68.441 2 0.00095474 78407 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 78.496 47.926 53298000 0 0 0 3699900 0 6444700 5442900 3195100 0 6153800 5285400 5799500 6247500 4709000 6320400 60623 1838 54547 512021;512022;512023;512024;512025;512026;512027;512028;512029;512030;512031 406442;406443;406444;406445;406446;406447;406448;406449;406450 406444 2984;2985 7 YLVLANMLMK Oxidation (M) 1210.6454 0.64538717 1838 P61201 COPS2 COP9 signalosome complex subunit 2 yes yes 0 1 0 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 84.812 83.772 2 0.0039442 107245 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.142 67.636 37564000 5648600 0 0 0 0 4236200 0 2522000 0 0 5033600 4324600 0 4231600 11568000 60624 1838 54547 512032;512033;512034;512035;512036;512037;512038 406451;406452;406453;406454;406455 406452 2984;2985 4 YLVLANMLMK Unmodified 1194.6505 0.65047255 1838 P61201 COPS2 COP9 signalosome complex subunit 2 yes yes 0 0 0 By MS/MS 10 0 1 1 89.307 89.451 2 0.039105 103554 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.754 30.712 3273800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3273800 60625 1838 54547 512039 406456 406456 1 YLVLDCVPEER Unmodified 1391.6755 0.67550132 213 O14776 TCERG1 Transcription elongation regulator 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 72.938 73.009 2 4.3531E-05 83984 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 116.3 104.46 95498000 0 0 0 3154800 7861300 0 6045400 5534900 5187700 10956000 7008300 18448000 12787000 8010400 10504000 60626 213 54548 512040;512041;512042;512043;512044;512045;512046;512047;512048;512049;512050 406457;406458;406459;406460;406461;406462;406463 406462 7 YLVLDEADR Unmodified 1092.5451 0.54513908 170 O00571;O15523;Q9NQI0 DDX3X;DDX3Y;DDX4 ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y;Probable ATP-dependent RNA helicase DDX4 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 55.695 55.577 2 0.0050719 62637 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 84.498 49.605 85819000 0 0 0 12158000 10624000 17212000 12495000 14353000 0 18976000 0 0 0 0 0 60627 170 54549 512051;512052;512053;512054;512055;512056 406464;406465;406466;406467;406468;406469;406470;406471;406472;406473 406466 10 YLVNPEGQVVK Unmodified 1244.6765 0.6764876 3515 Q8TED1 GPX8 Probable glutathione peroxidase 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.03 55.161 2 0.00032275 62718 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 89.247 57.875 129680000 0 0 0 7642900 7724700 8437800 11378000 12372000 8762600 11610000 13670000 13922000 11661000 10092000 12403000 60628 3515 54550 512057;512058;512059;512060;512061;512062;512063;512064;512065;512066;512067;512068 406474;406475;406476;406477;406478;406479;406480;406481;406482;406483;406484;406485 406480 12 YLVSLGCIK Unmodified 1051.5736 0.57360243 424 O60684 KPNA6 Importin subunit alpha-7 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 74.221 74.424 2 0.010025 84927 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 65.038 38.436 13631000 0 0 0 0 0 0 0 0 0 2276800 2633800 0 0 2546000 6174000 60629 424 54551 512069;512070;512071;512072 406486;406487 406487 2 YLVTALIK Unmodified 919.57425 0.57425436 902 P0CG13 CHTF8 Chromosome transmission fidelity protein 8 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.232 76.29 2 0.016586 87977 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 67.032 48.653 136790000 0 0 0 6166100 7523800 8930900 9651600 12327000 8112100 13363000 16518000 14231000 9264100 10693000 20008000 60630 902 54552 512073;512074;512075;512076;512077;512078;512079;512080;512081;512082;512083;512084 406488;406489;406490;406491;406492;406493;406494;406495;406496;406497 406494 10 YLVVNADEGEPGTCK Unmodified 1650.7559 0.75593649 1603 P49821 NDUFV1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 55.178 49.369 2 0.00023695 63902 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 94.767 78.629 10630000 0 10630000 0 0 0 0 0 0 0 0 0 0 0 0 0 60631 1603 54553 512085 406498 406498 1 YLWESPSLAIK Unmodified 1305.6969 0.69688869 624 O95163 IKBKAP Elongator complex protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 83.187 82.575 2 0.0021054 104493 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.65 86.495 156150000 111380000 0 0 0 0 3337700 1104800 2650100 1872300 4191100 2499000 2895700 5130000 5592000 15495000 60632 624 54554 512086;512087;512088;512089;512090;512091;512092;512093;512094;512095;512096 406499;406500;406501;406502;406503;406504;406505;406506 406504 8 YLWNNIK Unmodified 949.50215 0.50215205 784;3914 P04632;Q96L46 CAPNS1;CAPNS2 Calpain small subunit 1;Calpain small subunit 2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69.246 68.042 2 0.018278 78527 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 112.27 86.817 948440000 206820000 71772000 16350000 47334000 25519000 46390000 48534000 53985000 39979000 48821000 64783000 54630000 56137000 42250000 125140000 60633 784;3914 54555 512097;512098;512099;512100;512101;512102;512103;512104;512105;512106;512107;512108;512109;512110;512111;512112 406507;406508;406509;406510;406511;406512;406513;406514;406515;406516;406517;406518;406519;406520;406521 406519 15 YLYADSSK Unmodified 945.44436 0.4443624 3418 Q8NDI1 EHBP1 EH domain-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS 2.67 0.471 1 2 1 2 25.571 21.222 2 0.033827 28114 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.26 39.522 19476000 260040 19216000 0 0 0 0 0 0 0 0 0 0 0 0 0 60634 3418 54556 512113;512114;512115 406522 406522 1 YLYEIAR Unmodified 926.48617 0.48616764 64;65 CON__P02769;CON__P02768-1;P02768 ALB Serum albumin no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 52.639 52.757 2 0.020823 59868 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 107.74 0 + 2388800000 0 0 0 288690000 238020000 147840000 112440000 603390000 94314000 284420000 0 197160000 146900000 108190000 167410000 60635 65;64 54557 512116;512117;512118;512119;512120;512121;512122;512123;512124;512125;512126 406523;406524;406525;406526;406527;406528;406529 406524 5 YLYLTPQDYK Unmodified 1302.6496 0.64960415 2231 Q13085 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.584 69.659 2 0.0014968 79913 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 90.709 61.333 79608000 0 0 0 3122500 3668900 6572500 4554000 4373000 3592900 10141000 7566200 10401000 7039900 6290800 12285000 60636 2231 54558 512127;512128;512129;512130;512131;512132;512133;512134;512135;512136;512137;512138 406530;406531;406532;406533;406534;406535;406536;406537;406538;406539;406540;406541;406542;406543;406544 406538 15 YLYPNIDK Unmodified 1024.5229 0.52294707 1448 P42224 STAT1 Signal transducer and activator of transcription 1-alpha/beta yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 52.947 53.089 2 0.0043249 59975 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 111.82 29.553 268680000 0 0 0 11941000 10426000 30104000 17029000 7923700 10281000 31897000 38328000 25169000 24830000 21019000 39733000 60637 1448 54559 512139;512140;512141;512142;512143;512144;512145;512146;512147;512148;512149;512150 406545;406546;406547;406548;406549;406550;406551;406552;406553;406554;406555 406545 11 YLYSSEDYIK Unmodified 1279.5972 0.59723423 2252 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 7.76 3.47 3 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 60.098 58.738 2 0.0056573 67110 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 76.465 73.111 1955000000 36308000 1450800000 35320000 29886000 42398000 37931000 15624000 16398000 10395000 55088000 62779000 66246000 17776000 20353000 57680000 60638 2252 54560 512151;512152;512153;512154;512155;512156;512157;512158;512159;512160;512161;512162;512163;512164;512165;512166;512167 406556;406557;406558;406559;406560;406561 406561 5 YLYTLVITDK Unmodified 1227.6751 0.67509062 1945 P63173 RPL38 60S ribosomal protein L38 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 79.929 79.987 2 0.0026964 92208 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 93.649 86.589 636880000 0 0 0 13848000 30661000 51432000 37697000 43585000 42466000 71390000 56740000 82757000 33820000 50666000 121820000 60639 1945 54561 512168;512169;512170;512171;512172;512173;512174;512175;512176;512177;512178;512179 406562;406563;406564;406565;406566;406567;406568;406569;406570;406571;406572;406573;406574;406575;406576;406577;406578 406567 17 YLYYTGR Unmodified 934.45487 0.45486751 308 O43242 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.137 41.315 2 0.024035 46803 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 83.614 51.653 427930000 0 0 0 25383000 34381000 37913000 12892000 15165000 11345000 69712000 69030000 91225000 10873000 12726000 37281000 60640 308 54562 512180;512181;512182;512183;512184;512185;512186;512187;512188;512189;512190;512191 406579;406580;406581;406582;406583;406584 406584 6 YMACCLLYR Oxidation (M) 1264.5403 0.54027017 1961;3031;4093;1962 P68363;A6NHL2;Q71U36;Q9BQE3;P68366 TUBA1B;TUBAL3;TUBA1A;TUBA1C;TUBA4A Tubulin alpha-1B chain;Tubulin alpha chain-like 3;Tubulin alpha-1A chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 58.838 58.902 2 0.0061493 66486 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 67.032 60.719 15843000 0 0 0 3730000 0 0 0 0 0 0 0 4977900 4569000 2565700 0 60641 1961;3031;4093;1962 54563 512192;512193;512194;512195 406585;406586 406586 3156 2 YMACCLLYR Unmodified 1248.5454 0.54535555 1961;3031;4093;1962 P68363;A6NHL2;Q71U36;Q9BQE3;P68366 TUBA1B;TUBAL3;TUBA1A;TUBA1C;TUBA4A Tubulin alpha-1B chain;Tubulin alpha chain-like 3;Tubulin alpha-1A chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 67.418 67.569 2 0.017056 77941 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 56.011 48.86 31237000 0 0 0 3364800 0 0 0 0 0 0 5292700 6861000 4029800 2872800 8816100 60642 1961;3031;4093;1962 54563 512196;512197;512198;512199;512200;512201 406587;406588;406589;406590 406588 4 YMACCLLYRGDVVPK Unmodified 1843.8783 0.87831701 1961;3031;4093;1962 P68363;A6NHL2;Q71U36;Q9BQE3;P68366 TUBA1B;TUBAL3;TUBA1A;TUBA1C;TUBA4A Tubulin alpha-1B chain;Tubulin alpha chain-like 3;Tubulin alpha-1A chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain no no 0 0 1 By MS/MS 2 0 1 1 81.098 72.968 3 0.025785 95668 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 34.82 22.028 33986000 33986000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60643 1961;3031;4093;1962 54564 512202 406591 406591 1 YMADMDELFSQVDEK 2 Oxidation (M) 1851.7543 0.75428151 5029 Q9UNE7 STUB1 E3 ubiquitin-protein ligase CHIP yes yes 0 2 0 By MS/MS By MS/MS 2.5 0.5 2 2 1 3 72.878 67.711 2 3.384E-58 85931 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 178.95 172.56 68664000 267360 68397000 0 0 0 0 0 0 0 0 0 0 0 0 0 60644 5029 54565 512203;512204;512205;512206 406592;406593;406594 406593 6371;6372 3 YMADMDELFSQVDEK Oxidation (M) 1835.7594 0.75936689 5029 Q9UNE7 STUB1 E3 ubiquitin-protein ligase CHIP yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS 4.12 3.41 5 1 2 2 4 1 1 83.975 79.798 2;3 6.601E-42 100912 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 152.14 142.25 566680000 61493000 495780000 0 0 0 0 0 0 0 0 2057800 0 0 0 7342800 60645 5029 54565 512207;512208;512209;512210;512211;512212;512213;512214 406595;406596;406597;406598;406599;406600;406601 406596 6371;6372 5 YMADMDELFSQVDEK Unmodified 1819.7645 0.76445226 5029 Q9UNE7 STUB1 E3 ubiquitin-protein ligase CHIP yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 2 1 1 1 1 89.645 85.049 2 1.1507E-49 107640 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 160.67 148.18 33854000 27887000 3640000 2326800 0 0 0 0 0 0 0 0 0 0 0 0 60646 5029 54565 512215;512216;512217 406602;406603;406604 406603 3 YMDVQFDFK Oxidation (M) 1207.522 0.52196079 121 O00159 MYO1C Unconventional myosin-Ic yes yes 0 1 0 By MS/MS 2 0 1 1 74.038 68.882 2 0.01791 86509 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.043 23.851 22271000 0 22271000 0 0 0 0 0 0 0 0 0 0 0 0 0 60647 121 54566 512218 406605 406605 161 1 YMEDSTYYK Unmodified 1198.4852 0.48524094 2114 Q05397 PTK2 Focal adhesion kinase 1 yes yes 0 0 0 By MS/MS 10 0 1 1 33.795 34.517 2 0.042378 36901 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.825 53.351 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60648 2114 54567 512219 406606 406606 1 YMEEAIMQPLDHK 2 Oxidation (M) 1635.7273 0.7272789 2095 Q03393 PTS 6-pyruvoyl tetrahydrobiopterin synthase yes yes 0 2 0 By MS/MS 2 0 1 1 46.873 41.426 3 0.0072634 53768 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 44.426 38.531 14926000 0 14926000 0 0 0 0 0 0 0 0 0 0 0 0 0 60649 2095 54568 512220 406607 406607 3391;3392 1 YMEEAIMQPLDHK Unmodified 1603.7374 0.73744965 2095 Q03393 PTS 6-pyruvoyl tetrahydrobiopterin synthase yes yes 0 0 0 By MS/MS 2 0 1 1 74.371 69.215 3 0.021675 86951 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 24.964 20.648 22150000 0 22150000 0 0 0 0 0 0 0 0 0 0 0 0 0 60650 2095 54568 512221 406608 406608 1 YMEENDQLK Oxidation (M) 1184.502 0.50195363 1660 P51572 BCAP31 B-cell receptor-associated protein 31 yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 18.053 17.952 2 0.010391 21580 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.498 75.585 90210000 0 11555000 0 6756500 4329400 6013900 4645300 4994800 4911000 5839200 7585000 9079000 6132900 5744700 12624000 60651 1660 54569 512222;512223;512224;512225;512226;512227;512228;512229;512230;512231;512232;512233;512234 406609;406610;406611;406612 406611 2671 4 YMEENDQLK Unmodified 1168.507 0.50703901 1660 P51572 BCAP31 B-cell receptor-associated protein 31 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 26.974 26.824 2 0.0043294 27702 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 87.181 81.873 293600000 0 59909000 0 22757000 9786600 19966000 9502000 22992000 10963000 17800000 23256000 33506000 21126000 14375000 27658000 60652 1660 54569 512235;512236;512237;512238;512239;512240;512241;512242;512243;512244;512245;512246;512247 406613;406614;406615;406616;406617;406618;406619;406620;406621;406622;406623;406624 406617 11 YMEHEERPK Unmodified 1217.5499 0.54990688 686 O95757 HSPA4L Heat shock 70 kDa protein 4L yes yes 0 0 1 By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 7.2235 7.3709 3 0.010521 4830 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.601 90.601 58654000 0 0 0 0 818200 3112800 0 1829700 3484700 4292600 0 6384800 4567400 8807100 25356000 60653 686 54570 512248;512249;512250;512251;512252;512253;512254;512255;512256 406625 406625 0 YMEHEERPK Oxidation (M) 1233.5448 0.5448215 686 O95757 HSPA4L Heat shock 70 kDa protein 4L yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2.33 0.471 2 1 1 1 1 6.6194 3.6167 2;3 0.031186 5111 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 52.49 44.446 48404000 10999000 12175000 25231000 0 0 0 0 0 0 0 0 0 0 0 0 60654 686 54570 512257;512258;512259 406626;406627 406626 2 YMENGMQAVK Oxidation (M) 1185.5158 0.51582956 134 O00257 CBX4 E3 SUMO-protein ligase CBX4 yes yes 0 1 0 By MS/MS 2 0 1 1 27.973 23.668 2 0.020283 31173 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 62.546 48.389 11360000 0 11360000 0 0 0 0 0 0 0 0 0 0 0 0 0 60655 134 54571 512260 406628 406628 181 1 YMETLRTENEHR Unmodified 1577.7256 0.72563941 4343 Q9H147 DNTTIP1 Deoxynucleotidyltransferase terminal-interacting protein 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 23.703 23.979 3 0.042719 24154 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 30.828 27.631 28261000 0 0 0 0 0 2487400 1932400 1668500 1274000 2467500 0 3662900 3512700 2331300 8924700 60656 4343 54572 512261;512262;512263;512264;512265;512266;512267;512268;512269 406629 406629 1 YMEVSGNLR Oxidation (M) 1083.5019 0.50189405 2202 Q12874 SF3A3 Splicing factor 3A subunit 3 yes yes 0 1 0 By matching By MS/MS By matching By MS/MS By matching By matching By matching 10 0 7 1 1 1 1 1 1 1 28.575 28.649 2 0.026756 30977 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 44.349 27.056 23302000 0 0 0 2327500 2275000 2928300 2852700 0 2260800 0 0 7458100 0 3199900 0 60657 2202 54573 512270;512271;512272;512273;512274;512275;512276 406630 406630 3577 1 YMEVSGNLR Unmodified 1067.507 0.50697943 2202 Q12874 SF3A3 Splicing factor 3A subunit 3 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 42.14 42.232 2 0.0051133 46213 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.206 43.103 51938000 0 0 0 1824900 2632500 2933100 4208400 4541300 2440900 4730800 0 0 5739200 8725200 14162000 60658 2202 54573 512277;512278;512279;512280;512281;512282;512283;512284;512285;512286 406631;406632;406633;406634;406635;406636;406637 406633 7 YMEVSGNLRDLYDDK Oxidation (M) 1832.8251 0.82507869 2202 Q12874 SF3A3 Splicing factor 3A subunit 3 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 61.785 62.034 3 5.0214E-06 70783 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 78.69 74.469 157650000 0 0 0 0 0 17589000 0 0 15983000 24647000 0 29447000 22780000 13983000 33221000 60659 2202 54574 512287;512288;512289;512290;512291;512292;512293 406638;406639;406640;406641;406642;406643;406644;406645 406638 3577 8 YMGIPQIR Oxidation (M) 992.51134 0.51133653 2805 Q5VIR6 VPS53 Vacuolar protein sorting-associated protein 53 homolog yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 54.044 54.388 2 0.027158 60951 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 50.039 36.487 28562000 0 0 0 0 0 0 3507500 0 0 3155200 3935400 4846700 4421000 3016900 5678900 60660 2805 54575 512294;512295;512296;512297;512298;512299;512300 406646 406646 1 YMHAGSSDLLSEAIPESLK Oxidation (M) 2062.9881 0.98812127 3615 Q92538 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 83.622 80.005 3 0.00032563 96856 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 53.278 49.558 101690000 0 91056000 10634000 0 0 0 0 0 0 0 0 0 0 0 0 60661 3615 54576 512301;512302 406647 406647 5117 1 YMIVDEGHR Unmodified 1118.5179 0.51787847 1656;1655 P51532;P51531 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 no no 0 0 0 By MS/MS 10 0 1 1 33.687 33.85 2 0.021188 37213 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 52.482 41.318 2024800 0 0 0 0 0 0 0 2024800 0 0 0 0 0 0 0 60662 1656;1655 54577 512303 406648 406648 1 YMLPLDNLK Unmodified 1105.5842 0.58416712 1630 P50570;Q9UQ16 DNM2;DNM3 Dynamin-2;Dynamin-3 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 80.418 79.847 2 0.0037093 91601 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 95.909 54.607 182380000 12889000 0 0 4405200 4908200 11885000 7561700 13938000 7024700 17372000 12991000 13840000 9229300 15779000 50558000 60663 1630 54578 512304;512305;512306;512307;512308;512309;512310;512311;512312;512313;512314;512315;512316 406649;406650;406651;406652;406653;406654;406655;406656;406657;406658;406659;406660;406661 406657 13 YMLPLDNLK Oxidation (M) 1121.5791 0.57908174 1630 P50570;Q9UQ16 DNM2;DNM3 Dynamin-2;Dynamin-3 yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.08 3.33 2 1 9 2 1 1 1 1 1 1 1 1 1 1 75.741 74.918 2 0.0022637 85288 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 104.21 88.828 662980000 0 490590000 8601300 0 11715000 0 17029000 12384000 18854000 26443000 18122000 19269000 20457000 19517000 0 60664 1630 54578 512317;512318;512319;512320;512321;512322;512323;512324;512325;512326;512327;512328 406662;406663;406664;406665;406666;406667;406668;406669;406670;406671 406668 2621 10 YMLTHQELASDGEIETK Unmodified 1963.9197 0.91970735 2072 Q02241 KIF23 Kinesin-like protein KIF23 yes yes 0 0 0 By MS/MS 2 0 1 1 63.955 58.047 3 0.0032954 74393 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 44.585 40.681 18101000 0 18101000 0 0 0 0 0 0 0 0 0 0 0 0 0 60665 2072 54579 512329 406672 406672 1 YMLVTFEEPPYAIK Oxidation (M) 1715.848 0.84804596 4982 Q9UL03 INTS6 Integrator complex subunit 6 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 84.799 84.946 2 0.0015217 98520 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 51.092 34.46 13699000 0 0 0 0 0 0 0 0 0 5625000 4412300 3662200 0 0 0 60666 4982 54580 512330;512331;512332 406673;406674;406675 406674 6331 3 YMMVDSAEDQK Oxidation (M) 1331.5374 0.53735286 4392 Q9H467 CUEDC2 CUE domain-containing protein 2 yes yes 0 1 0 By MS/MS 2 0 2 2 31.984 27.45 2 0.0032986 36034 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.95 76.469 11447000 0 11447000 0 0 0 0 0 0 0 0 0 0 0 0 0 60667 4392 54581 512333;512334 406676;406677 406676 5851;5852 2 YMMVDSAEDQK Unmodified 1315.5424 0.54243824 4392 Q9H467 CUEDC2 CUE domain-containing protein 2 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS 8 3.46 1 3 1 1 1 1 39.331 38.432 2 3.826E-09 48133 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 133.13 125.09 69943000 0 56979000 0 0 0 0 0 0 0 0 3613000 0 0 3021100 6329400 60668 4392 54581 512335;512336;512337;512338 406678;406679;406680 406678 3 YMNSDTTSPELR Oxidation (M) 1428.6191 0.61910866 3994 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 28.733 28.978 2 1.1877E-06 31281 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 114.5 109.53 85352000 0 0 0 0 5110700 10158000 4700300 0 3762400 7966900 16752000 13117000 9674700 6022100 8088800 60669 3994 54582 512339;512340;512341;512342;512343;512344;512345;512346;512347;512348 406681;406682;406683;406684;406685;406686;406687;406688;406689;406690;406691 406682 5476 11 YMNSDTTSPELR Unmodified 1412.6242 0.62419403 3994 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 37.598 38.005 2 1.8487E-06 40992 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 114.4 102.35 57467000 0 0 0 0 0 0 0 7368600 0 7121900 0 11808000 10418000 7388600 13362000 60670 3994 54582 512349;512350;512351;512352;512353;512354 406692;406693;406694;406695;406696 406693 5 YMNSGPVVAMVWEGLNVVK Unmodified 2092.0486 0.048553457 1138 P22392;O60361 NME2;NME2P1 Nucleoside diphosphate kinase B;Putative nucleoside diphosphate kinase yes no 0 0 0 By matching By MS/MS 2 0 2 1 1 103.84 97.419 3 0.0038492 120255 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 37.999 28.077 8315700 1305600 7010100 0 0 0 0 0 0 0 0 0 0 0 0 0 60671 1138 54583 512355;512356 406697 406697 1 YMPHAVLK Unmodified 957.51061 0.51060825 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 34.265 34.356 2 0.018337 37257 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 64.523 40.755 66137000 0 0 0 5439700 3940300 5913300 8824000 7505400 4313600 5948700 10210000 0 0 0 14042000 60672 2930 54584 512357;512358;512359;512360;512361;512362;512363;512364;512365 406698;406699;406700 406699 3 YMPQNPCIIATK Unmodified 1434.6999 0.69994194 2169 Q09028 RBBP4 Histone-binding protein RBBP4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 59.019 59.201 2 0.00066681 67716 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 76.228 60.688 221140000 0 0 0 0 8793900 9686300 8470200 7088600 8437300 15156000 26536000 37343000 17701000 23459000 58467000 60673 2169 54585 512366;512367;512368;512369;512370;512371;512372;512373;512374;512375;512376 406701;406702;406703;406704;406705;406706;406707;406708;406709;406710;406711 406709 11 YMPQNPCIIATK Oxidation (M) 1450.6949 0.69485656 2169 Q09028 RBBP4 Histone-binding protein RBBP4 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 49.853 50.016 2 0.00047248 55397 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.509 65.2 216140000 0 0 0 12857000 14582000 0 9739300 0 12383000 13952000 30682000 40306000 20820000 23979000 36843000 60674 2169 54585 512377;512378;512379;512380;512381;512382;512383;512384;512385;512386 406712;406713;406714;406715;406716;406717;406718;406719;406720;406721;406722 406715 3487 11 YMPQNPHIIATK Unmodified 1411.7282 0.7282056 2615 Q16576 RBBP7 Histone-binding protein RBBP7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.81 2.84 4 23 2 2 2 1 2 2 2 2 2 2 2 2 2 2 46.227 45.506 2;3 1.7253E-05 50213 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 126.71 113.33 2809300000 247730000 0 48380000 101900000 9045500 143210000 119570000 133460000 90487000 188390000 354800000 309510000 187790000 250140000 624850000 60675 2615 54586 512387;512388;512389;512390;512391;512392;512393;512394;512395;512396;512397;512398;512399;512400;512401;512402;512403;512404;512405;512406;512407;512408;512409;512410;512411;512412;512413 406723;406724;406725;406726;406727;406728;406729;406730;406731;406732;406733;406734;406735;406736;406737;406738;406739 406734 10 YMPQNPHIIATK Oxidation (M) 1427.7231 0.72312022 2615 Q16576 RBBP7 Histone-binding protein RBBP7 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 7.82 3.56 6 16 2 2 2 1 1 2 1 2 2 1 1 2 1 2 38.362 37.34 2;3 1.1437E-05 51578 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 110.39 83.945 1665800000 326570000 13600000 89061000 8001900 89481000 0 122520000 103880000 106390000 163300000 24041000 33386000 225770000 14983000 344830000 60676 2615 54586 512414;512415;512416;512417;512418;512419;512420;512421;512422;512423;512424;512425;512426;512427;512428;512429;512430;512431;512432;512433;512434;512435 406740;406741;406742;406743;406744;406745;406746;406747;406748;406749;406750 406745 4270 8 YMQAVIQYGK Oxidation (M) 1215.5958 0.59579444 2294 Q13451 FKBP5 Peptidyl-prolyl cis-trans isomerase FKBP5;Peptidyl-prolyl cis-trans isomerase FKBP5, N-terminally processed yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 46.492 40.092 2 0.0028417 55019 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.492 71.598 42667000 12662000 30005000 0 0 0 0 0 0 0 0 0 0 0 0 0 60677 2294 54587 512436;512437 406751;406752;406753;406754 406754 3757 4 YMQAVIQYGK Unmodified 1199.6009 0.60087982 2294 Q13451 FKBP5 Peptidyl-prolyl cis-trans isomerase FKBP5;Peptidyl-prolyl cis-trans isomerase FKBP5, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.8 3.92 2 3 1 1 1 1 1 56.857 54.288 2 0.0079863 72744 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 95.909 79.765 110880000 77647000 21524000 0 0 0 0 0 0 0 0 2796400 0 0 3141700 5767000 60678 2294 54587 512438;512439;512440;512441;512442 406755;406756;406757;406758 406757 4 YMRALDEYYDK Oxidation (M) 1481.6497 0.6496805 1398 P38606 ATP6V1A V-type proton ATPase catalytic subunit A yes yes 0 1 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 45.277 39.77 3 0.00059776 54672 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 89.301 76.67 154930000 77412000 40375000 37143000 0 0 0 0 0 0 0 0 0 0 0 0 60679 1398 54588 512443;512444;512445 406759;406760;406761 406760 2166 3 YMRALDEYYDK Unmodified 1465.6548 0.65476588 1398 P38606 ATP6V1A V-type proton ATPase catalytic subunit A yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 58.686 52.707 3 0.016642 65401 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 40.767 26.684 142570000 102320000 34830000 5422100 0 0 0 0 0 0 0 0 0 0 0 0 60680 1398 54588 512446;512447;512448 406762;406763;406764 406764 2 YMSNTYEQLSK Oxidation (M) 1378.6075 0.60748134 2233 Q13107 USP4 Ubiquitin carboxyl-terminal hydrolase 4 yes yes 0 1 0 By MS/MS 2 0 1 1 37.591 32.676 2 3.9979E-05 42647 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 114.5 104.54 22566000 0 22566000 0 0 0 0 0 0 0 0 0 0 0 0 0 60681 2233 54589 512449 406765 406765 3630 1 YMSNTYEQLSK Unmodified 1362.6126 0.61256672 2233 Q13107 USP4 Ubiquitin carboxyl-terminal hydrolase 4 yes yes 0 0 0 By MS/MS 2 0 1 1 47.446 41.883 2 3.4039E-09 54510 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 140.45 132.97 26440000 0 26440000 0 0 0 0 0 0 0 0 0 0 0 0 0 60682 2233 54589 512450 406766 406766 1 YMSPEQISSQDYGK Unmodified 1631.7137 0.71373732 1091 P19525 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 52.797 52.482 2 0.00061299 59707 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 80.979 63.115 70837000 0 12273000 0 3872400 3098900 4180700 4335900 4869200 2816000 5422000 6436900 6272800 3668600 3677300 9913300 60683 1091 54590 512451;512452;512453;512454;512455;512456;512457;512458;512459;512460;512461;512462;512463 406767;406768;406769;406770;406771;406772;406773;406774;406775;406776 406773 10 YMSPEQISSQDYGK Oxidation (M) 1647.7087 0.70865195 1091 P19525 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 42.043 42.29 2 0.00098896 46855 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 57.836 44.483 41035000 0 0 0 0 5021800 4564400 5089600 0 0 5488500 6957200 8365000 0 0 5548600 60684 1091 54590 512464;512465;512466;512467;512468;512469;512470 406777;406778;406779;406780 406780 1565 2 YMTDGMLLR Unmodified 1098.5202 0.52018666 384;295;2414 O60231;O43143;Q14562 DHX16;DHX15;DHX8 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16;Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15;ATP-dependent RNA helicase DHX8 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 67.264 67.414 2 0.0067484 76986 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 74.255 64.117 72320000 0 0 0 0 3030300 5306300 2867500 4936200 4236800 6457500 5400000 7265100 5060100 6871500 20888000 60685 384;295;2414 54591 512471;512472;512473;512474;512475;512476;512477;512478;512479;512480;512481 406781;406782;406783;406784;406785;406786;406787;406788;406789 406788 9 YMTDGMLLR 2 Oxidation (M) 1130.51 0.5100159 384;295;2414 O60231;O43143;Q14562 DHX16;DHX15;DHX8 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16;Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15;ATP-dependent RNA helicase DHX8 no no 0 2 0 By MS/MS 10 0 1 1 40.644 41.398 2 0.048092 46201 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 40.067 21.689 35340000 0 0 0 0 0 0 0 0 0 0 0 35340000 0 0 0 60686 384;295;2414 54591 512482 406790 406790 0 YMTISDEWDIPEK Oxidation (M) 1641.7232 0.72323938 1776 P55884 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 75.518 74.282 2 4.4095E-06 91841 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 103.34 98.436 533070000 14263000 419120000 4502000 5149400 5086100 7183400 6062300 0 6705300 8209800 10489000 13873000 8661300 8164900 15598000 60687 1776 54592 512483;512484;512485;512486;512487;512488;512489;512490;512491;512492;512493;512494;512495;512496;512497 406791;406792;406793;406794;406795;406796;406797;406798;406799;406800;406801;406802;406803;406804;406805;406806 406794 2903 16 YMTISDEWDIPEK Unmodified 1625.7283 0.72832476 1776 P55884 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 6 4 3 3 1 1 1 1 1 1 82.165 79.693 2 3.0045E-08 99003 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 133.89 127.2 317800000 19291000 274180000 3366900 0 0 0 0 0 0 0 3569200 0 0 3184300 14202000 60688 1776 54592 512498;512499;512500;512501;512502;512503 406807;406808;406809;406810;406811;406812;406813 406807 7 YNACILEYK Unmodified 1172.5536 0.55359527 2608 Q16531 DDB1 DNA damage-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 7 3.69 1 1 3 2 1 1 1 61.955 59.97 2 0.0057209 76846 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.57 80.32 307510000 0 293130000 0 0 0 0 0 0 0 2584200 6375800 0 0 5412900 0 60689 2608 54593 512504;512505;512506;512507;512508 406814;406815 406814 2 YNADEAR Unmodified 837.3617 0.3616954 1526 P47813;O14602 EIF1AX;EIF1AY Eukaryotic translation initiation factor 1A, X-chromosomal;Eukaryotic translation initiation factor 1A, Y-chromosomal yes no 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 7.7552 4.7174 2 0.027727 6909 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.068 78.403 311370000 16025000 292220000 3125900 0 0 0 0 0 0 0 0 0 0 0 0 60690 1526 54594 512509;512510;512511 406816 406816 1 YNADEARSLK Unmodified 1165.5728 0.57275081 1526 P47813;O14602 EIF1AX;EIF1AY Eukaryotic translation initiation factor 1A, X-chromosomal;Eukaryotic translation initiation factor 1A, Y-chromosomal yes no 0 0 1 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 2 3 2 24.857 20.763 2;3 0.00010773 27707 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 157.34 75.561 2057600000 211680000 1056300000 789650000 0 0 0 0 0 0 0 0 0 0 0 0 60691 1526 54595 512512;512513;512514;512515;512516;512517;512518 406817;406818;406819;406820;406821;406822 406817 2 YNALLAVQK Unmodified 1018.5811 0.58113065 4917 Q9UI12 ATP6V1H V-type proton ATPase subunit H yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 53.026 53.396 2 0.0050958 61003 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 83.753 62.225 88650000 0 0 0 0 0 0 11696000 8878400 0 0 16143000 14814000 0 10729000 26390000 60692 4917 54596 512519;512520;512521;512522;512523;512524;512525;512526;512527;512528;512529 406823;406824;406825;406826;406827;406828;406829;406830;406831;406832;406833 406825 11 YNAPTSHVTPSVK Unmodified 1399.7096 0.70957864 391 O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.9 3.81 6 2 12 2 4 2 1 1 1 1 1 1 1 1 1 1 1 1 34.495 32.654 2;3 6.4239E-47 43069 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 197.07 153.99 1561000000 731880000 512830000 168410000 6887300 5949200 11984000 8895700 5985900 8055200 12028000 20352000 15798000 14869000 12158000 24902000 60693 391 54597 512530;512531;512532;512533;512534;512535;512536;512537;512538;512539;512540;512541;512542;512543;512544;512545;512546;512547;512548;512549 406834;406835;406836;406837;406838;406839;406840;406841;406842;406843;406844;406845;406846;406847;406848;406849;406850;406851;406852;406853;406854 406838 17 YNASSQQQREIIK Unmodified 1563.8005 0.80051892 3248 Q8IWW6 ARHGAP12 Rho GTPase-activating protein 12 yes yes 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 30.362 25.499 2;3 1.4975E-05 35607 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 121.08 85.535 54617000 42733000 0 11884000 0 0 0 0 0 0 0 0 0 0 0 0 60694 3248 54598 512550;512551;512552 406855;406856;406857 406857 3 YNAYPSEQEK Unmodified 1227.5408 0.54078198 4296;2550 Q15583;Q9GZN2 TGIF1;TGIF2 Homeobox protein TGIF1;Homeobox protein TGIF2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.253 21.49 2 0.00054799 22336 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 128.12 82.441 205490000 0 0 0 0 14432000 22400000 18964000 14008000 15158000 15250000 24152000 26311000 15912000 15343000 23561000 60695 2550;4296 54599 512553;512554;512555;512556;512557;512558;512559;512560;512561;512562;512563;512564 406858;406859;406860;406861;406862;406863;406864;406865;406866;406867;406868;406869;406870 406870 12 YNCDFCVHGNDITLTVDGRDTYEEVK Unmodified 3119.3601 0.36006378 4009 Q99447 PCYT2 Ethanolamine-phosphate cytidylyltransferase yes yes 0 0 1 By MS/MS 2 0 1 1 81.376 73.246 4 0.00014093 96032 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 44.3 41.472 11427000 11427000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60696 4009 54600 512565 406871 406871 1 YNDIDLTIDK Unmodified 1208.5925 0.5924832 1540 P48506 GCLC Glutamate--cysteine ligase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 64.887 60.149 2 0.008777 80322 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 77.662 57.876 171800000 6778900 165030000 0 0 0 0 0 0 0 0 0 0 0 0 0 60697 1540 54601 512566;512567;512568 406872;406873 406873 1 YNDPIYVK Unmodified 1010.5073 0.50729701 2178;1937 P63010;Q10567 AP2B1;AP1B1 AP-2 complex subunit beta;AP-1 complex subunit beta-1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 46.091 45.318 2 0.0059797 50997 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 104.75 80.774 283930000 11726000 0 6096400 12214000 13371000 25335000 18677000 19401000 15241000 0 30999000 23893000 25704000 34482000 46792000 60698 1937;2178 54602 512569;512570;512571;512572;512573;512574;512575;512576;512577;512578;512579;512580;512581 406874;406875;406876;406877;406878;406879;406880;406881;406882;406883;406884;406885;406886 406875 11 YNDTFWK Unmodified 972.43413 0.43413207 1002 P14625;Q58FF3 HSP90B1;HSP90B2P Endoplasmin;Putative endoplasmin-like protein yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.47 3.07 2 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 55.659 54.803 2 0.012413 68233 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 124.37 95.035 1822300000 0 1039700000 83238000 26090000 21665000 58371000 38755000 42782000 23482000 81187000 77625000 55109000 48897000 72712000 152720000 60699 1002 54603 512582;512583;512584;512585;512586;512587;512588;512589;512590;512591;512592;512593;512594;512595;512596 406887;406888;406889;406890;406891;406892;406893 406890 5 YNEEERAQQEAEAAQR Unmodified 1920.8562 0.85619589 4006 Q99426 TBCB Tubulin-folding cofactor B yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 33.363 33.438 3 8.0873E-08 36764 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 68.944 57.682 13191000 0 0 0 0 0 6066600 0 0 0 7124600 0 0 0 0 0 60700 4006 54604 512597;512598 406894;406895;406896 406895 3 YNELSYK Unmodified 915.4338 0.43379771 4137 Q9BT78 COPS4 COP9 signalosome complex subunit 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 29.521 29.666 2 0.023725 31964 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 84.244 32.013 182840000 0 0 0 8249700 8917400 13504000 14733000 8655200 9067600 17607000 24082000 0 19100000 16879000 42049000 60701 4137 54605 512599;512600;512601;512602;512603;512604;512605;512606;512607;512608;512609 406897;406898;406899;406900 406899 4 YNEQHVPGSPFTAR Unmodified 1601.7587 0.7586541 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.43 3.14 5 1 24 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 48.663 47.633 2;3 1.6129E-05 53281 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 76.358 74.146 2027800000 225290000 65706000 35173000 62740000 63461000 116210000 92868000 78908000 64818000 154390000 248240000 250840000 125270000 125610000 318310000 60702 1124 54606 512610;512611;512612;512613;512614;512615;512616;512617;512618;512619;512620;512621;512622;512623;512624;512625;512626;512627;512628;512629;512630;512631;512632;512633;512634;512635;512636;512637;512638;512639 406901;406902;406903;406904;406905;406906;406907;406908;406909;406910;406911;406912;406913;406914;406915;406916;406917;406918 406902 16 YNFFTGCPK Unmodified 1132.5012 0.50116577 4065 Q99832 CCT7 T-complex protein 1 subunit eta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 62.702 62.797 2 0.017989 72664 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 95.741 90.985 382950000 0 0 0 21938000 15846000 34882000 22728000 38872000 22148000 19560000 52240000 34940000 19793000 36512000 63496000 60703 4065 54607 512640;512641;512642;512643;512644;512645;512646;512647;512648;512649;512650;512651 406919;406920;406921;406922;406923 406922 0 YNFHGTAEQDLPFCK Unmodified 1825.8094 0.80936904 1438 P41240 CSK Tyrosine-protein kinase CSK yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 4 3.46 3 1 1 1 1 1 72.838 68.928 3 0.00019482 87839 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.632 68.864 237970000 136390000 83948000 11111000 0 0 0 0 0 0 0 0 0 0 0 6528700 60704 1438 54608 512652;512653;512654;512655 406924;406925;406926;406927;406928 406924 5 YNFPVEVEVPMER Oxidation (M) 1623.7603 0.76029359 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 1 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 19 1 2 1 2 1 2 1 2 2 2 2 1 81.018 81.089 2 6.1452E-08 92972 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 98.04 84.378 452510000 0 0 0 7695900 30414000 31115000 30462000 15666000 32109000 27251000 54036000 75613000 44952000 47900000 55292000 60705 1986 54609 512656;512657;512658;512659;512660;512661;512662;512663;512664;512665;512666;512667;512668;512669;512670;512671;512672;512673;512674 406929;406930;406931;406932;406933;406934;406935;406936;406937;406938;406939;406940;406941;406942;406943;406944;406945 406939 3242 9 YNFPVEVEVPMER Unmodified 1607.7654 0.76537896 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 85.228 85.365 2 1.2653E-11 98590 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 121.6 102.36 31080000 0 0 0 0 0 0 0 0 0 0 0 0 0 5857100 25223000 60706 1986 54609 512675;512676;512677 406946;406947;406948;406949 406946 4 YNFPVEVEVPMERK Oxidation (M) 1751.8553 0.8552566 1986 P78527 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 75.389 75.571 3 0.00047513 87132 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 53.403 47.105 66465000 0 0 0 0 0 0 0 10339000 0 9311700 0 13597000 7264800 0 25953000 60707 1986 54610 512678;512679;512680;512681;512682 406950;406951;406952;406953;406954 406954 3242 5 YNFRFEEPDSASVK Unmodified 1687.7842 0.78420015 3381 Q8N9T8 KRI1 Protein KRI1 homolog yes yes 0 0 1 By MS/MS 2 0 1 1 72.777 64.539 3 0.030391 85558 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 30.739 19.03 19124000 19124000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60708 3381 54611 512683 406955 406955 1 YNGDVEDIK Unmodified 1051.4822 0.48220447 3573 Q8WWI1 LMO7 LIM domain only protein 7 yes yes 0 0 0 By MS/MS 2 0 1 1 33.498 28.854 2 0.028492 37520 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.897 39.689 108720000 0 108720000 0 0 0 0 0 0 0 0 0 0 0 0 0 60709 3573 54612 512684 406956 406956 1 YNHIDESEMK Unmodified 1264.5394 0.53940177 3633 Q92598 HSPH1 Heat shock protein 105 kDa yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.04 3.41 6 1 21 2 3 2 2 1 1 2 2 1 2 2 2 2 2 2 23.144 22.276 2;3 0.0066827 22767 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.297 51.67 1118200000 56588000 740160000 67738000 8781800 3737800 7983800 8258000 9197600 4495100 16463000 36326000 34678000 13866000 23221000 86735000 60710 3633 54613 512685;512686;512687;512688;512689;512690;512691;512692;512693;512694;512695;512696;512697;512698;512699;512700;512701;512702;512703;512704;512705;512706;512707;512708;512709;512710;512711;512712 406957;406958;406959;406960;406961;406962;406963;406964;406965 406965 6 YNHIDESEMK Oxidation (M) 1280.5343 0.53431639 3633 Q92598 HSPH1 Heat shock protein 105 kDa yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 2 3 2 13.157 9.9379 2;3 0.0017376 15055 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 108.15 76.387 526390000 38059000 457160000 31166000 0 0 0 0 0 0 0 0 0 0 0 0 60711 3633 54613 512713;512714;512715;512716;512717;512718;512719 406966;406967;406968;406969 406968 5139 2 YNHINAK Unmodified 858.4348 0.43480077 2947 Q6PGP7 TTC37 Tetratricopeptide repeat protein 37 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 7.1198 4.2535 2 0.015609 7667 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 119.06 91.743 193160000 125280000 0 67881000 0 0 0 0 0 0 0 0 0 0 0 0 60712 2947 54614 512720;512721 406970;406971 406970 1 YNHLVYSQIPAAVK Unmodified 1601.8566 0.85657723 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.65 3.65 5 12 2 1 2 1 1 1 1 1 1 1 1 1 2 1 65.964 64.246 2;3 2.4274E-06 85071 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 102.33 95.292 353070000 141310000 60012000 13094000 0 3685600 12276000 7111900 6533400 7124100 14103000 13144000 21613000 12289000 11035000 29737000 60713 619 54615 512722;512723;512724;512725;512726;512727;512728;512729;512730;512731;512732;512733;512734;512735;512736;512737;512738 406972;406973;406974;406975;406976;406977;406978;406979;406980;406981;406982;406983 406974 12 YNHPQGFFSHR Unmodified 1388.6374 0.63741675 2343 Q13769 THOC5 THO complex subunit 5 homolog yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 33.993 34.297 3 0.0035494 36100 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.568 43.252 48937000 0 0 0 0 0 9019800 1902000 3152800 6420200 0 0 5335200 10235000 0 12872000 60714 2343 54616 512739;512740;512741;512742;512743;512744;512745 406984;406985;406986 406985 3 YNIEVVCEYIVK Unmodified 1527.7643 0.76431633 1427 P41091;Q2VIR3 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein yes no 0 0 0 By MS/MS 2 0 1 1 89.333 81.203 2 0.0008236 105545 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.827 74.937 9137700 9137700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60715 1427 54617 512746 406987;406988 406988 2 YNILGTNAIMDK Unmodified 1351.6806 0.6805867 4162 Q9BUJ2 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 76.822 75.692 2 4.5292E-13 94281 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.94 115.3 481410000 35086000 238090000 6587900 4966100 8711100 18592000 9886800 13677000 14339000 22496000 18011000 17064000 14952000 19751000 39203000 60716 4162 54618 512747;512748;512749;512750;512751;512752;512753;512754;512755;512756;512757;512758;512759;512760;512761;512762 406989;406990;406991;406992;406993;406994;406995;406996;406997;406998;406999;407000;407001;407002;407003;407004 406992 15 YNILGTNAIMDK Oxidation (M) 1367.6755 0.67550132 4162 Q9BUJ2 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes yes 0 1 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 70.53 65.85 2 0.024372 84513 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 51.162 34.491 93896000 0 91279000 2616900 0 0 0 0 0 0 0 0 0 0 0 0 60717 4162 54618 512763;512764;512765 407005;407006;407007 407006 3 YNILGTNTIMDK Oxidation (M) 1397.6861 0.68606601 2046 Q00839 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.14 3.79 7 1 14 2 4 2 1 1 1 1 1 1 1 1 2 2 1 1 65.382 64.03 2 2.0845E-08 73744 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 128.81 85.728 7540500000 118250000 1549900000 27348000 310260000 462980000 508470000 482540000 310070000 367170000 538160000 518180000 726780000 751440000 413180000 455760000 60718 2046 54619 512766;512767;512768;512769;512770;512771;512772;512773;512774;512775;512776;512777;512778;512779;512780;512781;512782;512783;512784;512785;512786;512787 407008;407009;407010;407011;407012;407013;407014;407015;407016;407017;407018;407019;407020;407021;407022;407023;407024;407025;407026;407027;407028;407029;407030;407031;407032;407033;407034;407035;407036;407037;407038;407039;407040 407010 3314 33 YNILGTNTIMDK Unmodified 1381.6912 0.69115139 2046 Q00839 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.71 3.56 4 1 12 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 76.433 75.083 2 4.335E-43 86690 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 180.07 150.59 11891000000 332590000 4515300000 34850000 270840000 433340000 493050000 407850000 473720000 413740000 667050000 741390000 904440000 564070000 613730000 1024900000 60719 2046 54619 512788;512789;512790;512791;512792;512793;512794;512795;512796;512797;512798;512799;512800;512801;512802;512803;512804 407041;407042;407043;407044;407045;407046;407047;407048;407049;407050;407051;407052;407053;407054;407055;407056;407057 407050 17 YNIMAFNAADK Unmodified 1256.586 0.58595803 1351 P35269 GTF2F1 General transcription factor IIF subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 70.749 70.438 2 0.00056271 88489 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.11 96.492 224410000 0 116980000 0 4321200 5278500 7171200 5961700 7594900 8352000 10300000 10956000 11276000 6789900 9341700 20084000 60720 1351 54620 512805;512806;512807;512808;512809;512810;512811;512812;512813;512814;512815;512816;512817 407058;407059;407060;407061;407062;407063;407064;407065;407066;407067 407060 10 YNIMAFNAADK Oxidation (M) 1272.5809 0.58087266 1351 P35269 GTF2F1 General transcription factor IIF subunit 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 2 20 1 1 1 2 1 1 2 2 2 2 2 2 2 1 57.288 56.773 2 0.00050504 63624 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.379 64.852 193010000 4034300 40433000 0 5330200 13147000 6774900 9724900 11260000 11664000 18441000 19461000 17923000 14034000 13105000 7675600 60721 1351 54620 512818;512819;512820;512821;512822;512823;512824;512825;512826;512827;512828;512829;512830;512831;512832;512833;512834;512835;512836;512837;512838;512839 407068;407069;407070;407071;407072;407073;407074;407075;407076;407077;407078;407079 407070 2054 11 YNIMLVR Unmodified 907.49496 0.49495818 1641 P50990 CCT8 T-complex protein 1 subunit theta yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.578 66.663 2 0.023333 76309 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 90.836 48.712 412960000 0 0 0 12949000 15752000 37887000 19110000 31003000 13496000 34115000 41667000 39450000 18320000 43010000 106200000 60722 1641 54621 512840;512841;512842;512843;512844;512845;512846;512847;512848;512849;512850;512851 407080;407081;407082;407083;407084;407085;407086;407087;407088;407089;407090 407085 8 YNIMLVR Oxidation (M) 923.48987 0.48987281 1641 P50990 CCT8 T-complex protein 1 subunit theta yes yes 0 1 0 By MS/MS By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 57.16 56.903 2 0.015592 65240 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 84.359 28.333 134920000 0 0 0 35675000 41042000 1390900 56817000 0 0 0 0 0 0 0 0 60723 1641 54621 512852;512853;512854;512855 407091;407092;407093 407093 2641 3 YNIWCSTEHGNK Unmodified 1507.6514 0.65141184 5227 Q9Y5A9 YTHDF2 YTH domain-containing family protein 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 3 2 1 50.91 44.273 2;3 2.7686E-10 61184 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 125.97 104.51 67907000 64364000 0 3542900 0 0 0 0 0 0 0 0 0 0 0 0 60724 5227 54622 512856;512857;512858 407094;407095 407094 1 YNLDASEEEDSNK Unmodified 1512.6216 0.62161108 627 O95218 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31.917 31.292 2 1.92E-41 34079 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 172.8 170.37 243360000 11919000 29841000 0 9306900 9064900 12366000 11536000 12072000 11649000 11547000 19948000 40385000 13228000 18656000 31843000 60725 627 54623 512859;512860;512861;512862;512863;512864;512865;512866;512867;512868;512869;512870;512871;512872 407096;407097;407098;407099;407100;407101;407102;407103;407104;407105;407106;407107;407108;407109;407110 407107 15 YNLDASEEEDSNKK Unmodified 1640.7166 0.71657409 627 O95218 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.18 3.74 3 1 7 1 2 1 1 1 1 1 1 1 1 26.42 25.07 3 3.1382E-06 32080 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.911 65.192 139920000 8787400 75580000 1256600 0 0 2760500 7880600 0 0 0 10376000 8709000 8699600 5399700 10468000 60726 627 54624 512873;512874;512875;512876;512877;512878;512879;512880;512881;512882;512883 407111;407112;407113;407114;407115;407116;407117;407118;407119 407113 8 YNLGLDLR Unmodified 962.51853 0.5185304 721 P00367;P49448 GLUD1;GLUD2 Glutamate dehydrogenase 1, mitochondrial;Glutamate dehydrogenase 2, mitochondrial yes no 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 72.274 72.441 2 0.018283 83251 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 64.567 19.486 12114000 0 0 0 0 0 0 5228400 6885400 0 0 0 0 0 0 0 60727 721 54625 512884;512885 407120;407121 407120 2 YNLNSHPPLNVLEQATIK Unmodified 2050.0847 0.084739268 619 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes yes 0 0 0 By MS/MS 2 0 1 1 87.076 78.946 3 0.0015672 102628 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.577 43.23 50128000 50128000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60728 619 54626 512886 407122 407122 1 YNLQEVVK Unmodified 991.53385 0.53384611 4726 Q9NXG2 THUMPD1 THUMP domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 52.808 53.111 2 0.0075386 60516 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 89.296 57.36 202570000 0 0 0 0 0 0 29287000 19651000 0 0 26984000 0 32503000 37683000 56461000 60729 4726 54627 512887;512888;512889;512890;512891;512892 407123;407124;407125;407126;407127;407128 407123 6 YNLQLNPEWR Unmodified 1331.6622 0.66223452 4700 Q9NWS0 PIH1D1 PIH1 domain-containing protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 76.121 76.407 2 0.039025 87735 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.149 57.449 5955800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5955800 60730 4700 54628 512893 407129 407129 0 YNLSQPSEAPPLAVHDEAEK Unmodified 2194.0542 0.054227 1142 P22670 RFX1 MHC class II regulatory factor RFX1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 62.775 62.836 3 0.002231 71113 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 36.523 31.87 100420000 0 0 0 7577400 6295100 11532000 7498200 6750300 4901200 12276000 10829000 0 8119700 7948800 16696000 60731 1142 54629 512894;512895;512896;512897;512898;512899;512900;512901;512902;512903;512904 407130;407131;407132;407133;407134 407134 5 YNNGSTELHSSSVGLAK Unmodified 1762.8486 0.84859132 3711 Q93100 PHKB Phosphorylase b kinase regulatory subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 42.34 37.268 3 5.3518E-07 48792 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 90.453 78.308 112910000 18384000 78884000 15642000 0 0 0 0 0 0 0 0 0 0 0 0 60732 3711 54630 512905;512906;512907;512908 407135;407136;407137;407138;407139 407135 5 YNNPAMLHNIDQEMLK Oxidation (M) 1945.9026 0.9026175 5042 Q9UNS2 COPS3 COP9 signalosome complex subunit 3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 3.46 6 2 1 3 2 1 1 69.287 65.339 3 5.1768E-11 87171 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 107.34 95.733 296600000 29973000 217580000 35061000 0 0 0 0 0 0 0 0 6135000 0 0 7854500 60733 5042 54631 512909;512910;512911;512912;512913;512914;512915;512916 407140;407141;407142;407143;407144;407145;407146;407147 407146 6393;6394 7 YNNPAMLHNIDQEMLK Unmodified 1929.9077 0.90770288 5042 Q9UNS2 COPS3 COP9 signalosome complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 7 3.87 3 5 1 1 1 1 1 1 1 1 76.097 74.255 3 1.1806E-05 93644 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.45 87.319 870690000 151740000 652430000 33915000 0 0 2046900 0 0 0 3153800 3120500 0 0 3438700 20850000 60734 5042 54631 512917;512918;512919;512920;512921;512922;512923;512924 407148;407149;407150;407151 407148 4 YNNPAMLHNIDQEMLK 2 Oxidation (M) 1961.8975 0.89753212 5042 Q9UNS2 COPS3 COP9 signalosome complex subunit 3 yes yes 0 2 0 By MS/MS 2 0 1 1 56.51 52.658 3 0.0018782 66149 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 50.04 44.611 22469000 0 0 22469000 0 0 0 0 0 0 0 0 0 0 0 0 60735 5042 54631 512925 407152 407152 6393;6394 1 YNPDTLFQDESYK Unmodified 1618.7151 0.71511753 4517 Q9HCK8 CHD8 Chromodomain-helicase-DNA-binding protein 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 9 2.65 1 7 1 1 1 1 1 1 1 1 73.316 72.796 2 0.0015377 90447 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 89.548 80.594 57839000 0 29568000 0 0 2547700 5899500 0 0 2613400 0 2731100 0 3625800 2459200 8394700 60736 4517 54632 512926;512927;512928;512929;512930;512931;512932;512933 407153;407154;407155;407156;407157;407158 407154 6 YNPDTLFQDESYKK Unmodified 1746.8101 0.81008055 4517 Q9HCK8 CHD8 Chromodomain-helicase-DNA-binding protein 8 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 62.852 62.843 3 0.0039233 71786 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 30.905 19.291 24466000 0 0 0 0 4259900 0 0 6174800 4303300 9727600 0 0 0 0 0 60737 4517 54633 512934;512935;512936;512937;512938 407159;407160;407161 407160 3 YNPENLATLER Unmodified 1318.6517 0.65172941 4851 Q9UBQ5 EIF3K Eukaryotic translation initiation factor 3 subunit K yes yes 0 0 0 By MS/MS 10 0 1 1 62.27 62.737 2 0.016217 71616 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 44.425 30.218 9736700 0 0 0 0 0 0 0 0 0 0 0 9736700 0 0 0 60738 4851 54634 512939 407162 407162 1 YNPGPQDFLLK Unmodified 1290.6608 0.66083754 3680 Q92889 ERCC4 DNA repair endonuclease XPF yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 78.374 77.868 2 0.0032462 90066 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 59.35 36.61 114390000 0 56155000 3416000 0 3883000 0 3833800 5157700 2982300 7150500 7097600 7104200 4643500 5114900 7850300 60739 3680 54635 512940;512941;512942;512943;512944;512945;512946;512947;512948;512949;512950;512951 407163;407164;407165;407166;407167;407168;407169;407170;407171;407172 407172 10 YNPIGESVLR Unmodified 1146.6033 0.60332266 2053 Q01433 AMPD2 AMP deaminase 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 62.735 63.132 2 0.017043 71341 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.828 44.317 41163000 0 0 0 0 0 0 0 0 0 0 9506900 9550400 0 9539000 12567000 60740 2053 54636 512952;512953;512954;512955 407173;407174 407173 2 YNPPDHDVVAMAR Unmodified 1483.6878 0.68779734 1189 P25440 BRD2 Bromodomain-containing protein 2 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 47.461 47.737 3 0.00036583 52655 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.891 51.277 43386000 0 0 0 3003700 0 0 0 3412100 0 7458600 4429800 6257100 6008200 4470000 8346700 60741 1189 54637 512956;512957;512958;512959;512960;512961;512962;512963 407175;407176;407177;407178;407179;407180 407176 6 YNPPDHDVVAMARK Unmodified 1611.7828 0.78276036 1189 P25440 BRD2 Bromodomain-containing protein 2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 47.405 41.585 3 0.0047984 57433 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 50.843 31.265 37215000 34984000 0 2230700 0 0 0 0 0 0 0 0 0 0 0 0 60742 1189 54638 512964;512965 407181;407182 407182 2 YNPPDHEVVAMAR Unmodified 1497.7034 0.70344741 441;2493 O60885;Q15059 BRD4;BRD3 Bromodomain-containing protein 4;Bromodomain-containing protein 3 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 2 46.774 47.044 3 0.0007869 52511 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.224 55.712 123970000 0 0 0 0 6614300 9824800 7166700 9850600 7546900 14797000 14807000 14300000 0 9960500 29105000 60743 441;2493 54639 512966;512967;512968;512969;512970;512971;512972;512973;512974;512975;512976 407183;407184;407185;407186;407187;407188;407189;407190;407191;407192 407191 8 YNPPDHEVVAMARK Unmodified 1625.7984 0.79841043 441;2493 O60885;Q15059 BRD4;BRD3 Bromodomain-containing protein 4;Bromodomain-containing protein 3 no no 0 0 1 By MS/MS By MS/MS 2 0 3 2 1 47.579 41.091 3;4 0.00058237 57283 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 59.185 45.781 253120000 250730000 0 2393300 0 0 0 0 0 0 0 0 0 0 0 0 60744 441;2493 54640 512977;512978;512979 407193;407194;407195 407195 3 YNPTWHCIVGR Unmodified 1401.6612 0.66118866 1943 P63167;Q96FJ2 DYNLL1;DYNLL2 Dynein light chain 1, cytoplasmic;Dynein light chain 2, cytoplasmic yes no 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 56.844 57.079 3 0.010484 63817 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 36.32 33.352 72524000 0 0 0 0 0 9773000 3312100 12609000 6187800 5706300 9637100 0 4767100 0 20531000 60745 1943 54641 512980;512981;512982;512983;512984;512985;512986;512987 407196;407197;407198;407199;407200 407197 5 YNQATPNFHQWR Unmodified 1560.7222 0.72220902 1629 P50552 VASP Vasodilator-stimulated phosphoprotein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 49.523 49.756 3 0.0011936 55056 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 49.448 40.315 139000000 0 0 0 0 0 29567000 8979500 12155000 11214000 14078000 0 0 17187000 11544000 34274000 60746 1629 54642 512988;512989;512990;512991;512992;512993;512994;512995 407201;407202;407203;407204;407205;407206;407207;407208;407209 407204 9 YNQATQTFHQWR Unmodified 1578.7328 0.7327737 3371 Q8N8S7 ENAH Protein enabled homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 2 1 1 1 2 1 1 1 1 1 43.435 43.714 2;3 1.203E-05 48232 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 105.13 89.378 333310000 0 0 0 0 0 39809000 16447000 23672000 19760000 34610000 37446000 42795000 53111000 20441000 45220000 60747 3371 54643 512996;512997;512998;512999;513000;513001;513002;513003;513004;513005;513006;513007 407210;407211;407212;407213;407214;407215;407216;407217;407218;407219;407220;407221 407221 11 YNQLLRIEEELGSK Unmodified 1690.889 0.88899957 827 P06733 ENO1 Alpha-enolase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 2.68 2.11 1 32 4 3 15 18 4 1 1 1 88.665 84.546 2;3 3.3213E-66 95310 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 226.42 191 15910000000 6945500000 8725500000 176550000 0 0 0 0 0 0 0 3975900 3482200 0 0 54637000 60748 827 54644 513008;513009;513010;513011;513012;513013;513014;513015;513016;513017;513018;513019;513020;513021;513022;513023;513024;513025;513026;513027;513028;513029;513030;513031;513032;513033;513034;513035;513036;513037;513038;513039;513040;513041;513042;513043;513044;513045;513046;513047 407222;407223;407224;407225;407226;407227;407228;407229;407230;407231;407232;407233;407234;407235;407236;407237;407238;407239;407240;407241;407242;407243;407244;407245;407246;407247;407248;407249;407250;407251;407252;407253;407254;407255;407256;407257;407258;407259;407260;407261;407262;407263;407264;407265;407266;407267;407268;407269 407251 43 YNQLMRIEEALGDK Unmodified 1678.8349 0.83485551 991 P13929 ENO3 Beta-enolase yes yes 0 0 1 By MS/MS 2 0 1 1 86.774 81.965 3 0.0064821 101923 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 43.297 35.836 55915000 0 55915000 0 0 0 0 0 0 0 0 0 0 0 0 0 60749 991 54645 513048 407270 407270 1 YNQLMRIEEALGDK Oxidation (M) 1694.8298 0.82977013 991 P13929 ENO3 Beta-enolase yes yes 0 1 1 By MS/MS 2 0 1 1 84.884 76.753 3 0.00050414 100171 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 82.102 69.719 30906000 30906000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60750 991 54645 513049 407271 407271 1342 1 YNQPFFVTSLPDDK Unmodified 1669.7988 0.79878758 1243 P29144 TPP2 Tripeptidyl-peptidase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 86.015 81.362 2 3.5787E-09 102149 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.37 98.529 793750000 10575000 774440000 8734800 0 0 0 0 0 0 0 0 0 0 0 0 60751 1243 54646 513050;513051;513052;513053 407272;407273;407274;407275;407276 407272 5 YNRDANVSGTLVSSSTLEK Unmodified 2040.0124 0.012362185 3885 Q96IZ0 PAWR PRKC apoptosis WT1 regulator protein yes yes 0 0 1 By MS/MS 10 0 2 2 52.904 53.558 3 1.4985E-05 60329 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 61.561 49.433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60752 3885 54647 513054;513055 407277;407278 407278 2 YNRDFESHITSYK Unmodified 1658.7689 0.76888444 4033 Q99613;B5ME19 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 0 0 1 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 42.267 41.772 3 7.1697E-06 45205 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 112.72 93.992 183870000 34281000 0 0 2509600 0 15640000 5971200 6160000 9549300 0 12955000 27145000 19618000 18466000 31576000 60753 4033 54648 513056;513057;513058;513059;513060;513061;513062;513063;513064;513065;513066;513067 407279;407280;407281;407282;407283;407284;407285 407280 1 YNREGDLLFTVAK Unmodified 1524.7936 0.79364262 2273 Q13347 EIF3I Eukaryotic translation initiation factor 3 subunit I yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.62 3.53 3 2 11 2 2 1 1 1 1 1 1 1 1 1 1 1 1 72.654 71.257 3 0.001851 81054 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 57.136 44.509 514700000 276390000 69796000 11824000 3401600 2692700 10047000 5184600 0 7450200 8964700 14353000 22065000 10821000 17361000 54348000 60754 2273 54649 513068;513069;513070;513071;513072;513073;513074;513075;513076;513077;513078;513079;513080;513081;513082;513083 407286;407287;407288;407289;407290;407291;407292;407293;407294;407295;407296;407297;407298 407287 9 YNRLDIIETNVK Unmodified 1476.7936 0.79364262 624 O95163 IKBKAP Elongator complex protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 70.548 62.281 3 0.00272 83228 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 71.806 58.669 57747000 57747000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60755 624 54650 513084 407299 407299 0 YNSALDTNATMINSFNK Unmodified 1902.8782 0.87817689 5298 Q9Y6X8 ZHX2 Zinc fingers and homeoboxes protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 78.217 73.442 2 6.5239E-16 91625 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.02 111.82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60756 5298 54651 513085 407300 407300 1 YNSEVVDK Unmodified 952.45018 0.45017606 375 O43847 NRD1 Nardilysin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 2 1 16.201 15.717 2 0.0063839 14440 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 101.33 70.659 506940000 15713000 285110000 0 8883900 5854600 8948600 9904200 8447000 6593700 0 30800000 0 44718000 37032000 44936000 60757 375 54652 513086;513087;513088;513089;513090;513091;513092;513093;513094;513095;513096;513097;513098;513099 407301;407302;407303;407304;407305;407306;407307;407308;407309 407307 9 YNSHSLENESIK Unmodified 1419.663 0.66302238 2302 Q13496 MTM1 Myotubularin yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 34.003 29.989 3 0.011596 39429 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 47.039 31.499 43613000 0 30186000 13427000 0 0 0 0 0 0 0 0 0 0 0 0 60758 2302 54653 513100;513101 407310;407311 407310 2 YNSMEDAK Oxidation (M) 972.38586 0.38586124 3402 Q8NBS9 TXNDC5 Thioredoxin domain-containing protein 5 yes yes 0 1 0 By MS/MS By MS/MS 1.5 0.5 1 1 1 1 55.743 56.755 2 0.0084005 92949 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 113.89 96.041 45683000 35346000 10337000 0 0 0 0 0 0 0 0 0 0 0 0 0 60759 3402 54654 513102;513103 407312;407313 407313 4958 2 YNSMEDAK Unmodified 956.39095 0.39094662 3402 Q8NBS9 TXNDC5 Thioredoxin domain-containing protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 10.428 9.8906 2 0.0024997 11426 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.74 100.12 270500000 13012000 243140000 0 0 446280 1469800 993070 1011600 800630 1035900 2418900 0 0 1395600 4772000 60760 3402 54654 513104;513105;513106;513107;513108;513109;513110;513111;513112;513113;513114 407314;407315;407316;407317 407314 4 YNSNLATPIAIK Unmodified 1303.7136 0.71360139 3256 Q8IX90 SKA3 Spindle and kinetochore-associated protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 66.633 66.768 2 0.027265 76366 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 37.696 25.471 58386000 0 0 0 3529300 0 6354100 5574100 6737900 0 6563200 6449200 7413500 3289500 6330800 6144100 60761 3256 54655 513115;513116;513117;513118;513119;513120;513121;513122;513123;513124 407318 407318 1 YNSNSGFVRDDNIR Unmodified 1655.7652 0.76519604 150 O00418 EEF2K Eukaryotic elongation factor 2 kinase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 38.253 38.41 3 0.0045801 41511 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 43.184 32.329 35637000 0 0 0 0 5289700 0 0 0 0 0 11340000 0 10438000 8569500 0 60762 150 54656 513125;513126;513127;513128 407319 407319 1 YNTEEFITVYPTDPPK Unmodified 1912.9095 0.90946024 3761 Q96BN8 OTULIN Ubiquitin thioesterase otulin yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 4 1 1 1 1 1 1 1 1 1 1 1 1 80.465 79.51 2;3 6.032E-41 98093 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 174.72 156.98 554780000 0 461120000 0 2099800 4710000 12057000 5609700 4611900 4335100 13021000 8895700 7304800 5508300 7246600 18256000 60763 3761 54657 513129;513130;513131;513132;513133;513134;513135;513136;513137;513138;513139;513140;513141;513142;513143;513144 407320;407321;407322;407323;407324;407325;407326;407327;407328;407329;407330;407331;407332 407323 12 YNTIETFNELFDAHK Unmodified 1840.8632 0.86317875 3320 Q8N3C0 ASCC3 Activating signal cointegrator 1 complex subunit 3 yes yes 0 0 0 By MS/MS 2 0 1 1 93.173 88.262 3 0.00021107 109573 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 63.682 54.152 21201000 0 21201000 0 0 0 0 0 0 0 0 0 0 0 0 0 60764 3320 54658 513145 407333 407333 1 YNTYMRNTSK Unmodified 1276.587 0.58702067 279 O15372 EIF3H Eukaryotic translation initiation factor 3 subunit H yes yes 0 0 1 By MS/MS 2 0 2 2 20.815 16.091 2;3 6.5015E-05 23187 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 137.05 115.52 89458000 89458000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60765 279 54659 513146;513147 407334;407335 407334 1 YNVPISSADIAQNQEFYK Unmodified 2086.0007 0.0007348666 4377 Q9H334 FOXP1 Forkhead box protein P1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 82.16 77.455 2 4.9466E-81 96383 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 190.85 162.14 31058000 0 31058000 0 0 0 0 0 0 0 0 0 0 0 0 0 60766 4377 54660 513148;513149;513150 407336;407337;407338 407337 3 YNVPLNR Unmodified 874.4661 0.4661009 4893 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 39.16 39.233 2 0.046482 43621 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 124.32 101.3 168850000 0 0 0 10070000 22090000 0 0 16995000 0 27577000 0 52611000 39508000 0 0 60767 4893 54661 513151;513152;513153;513154;513155;513156 407339 407339 1 YNYIGLSQGNLR Unmodified 1396.7099 0.709913 2987 Q6VN20 RANBP10 Ran-binding protein 10 yes yes 0 0 0 By MS/MS 10 0 1 1 67.355 67.492 2 0.033324 77747 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 50.353 31.914 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60768 2987 54662 513157 407340 407340 1 YNYLSLDSAK Unmodified 1172.5714 0.57135383 367 O43795 MYO1B Unconventional myosin-Ib yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 61.418 61.518 2 0.0030947 70405 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 90.906 80.271 82507000 0 0 0 4869200 6413900 7831900 7742600 5140400 6093000 6735300 7886100 9107300 6765500 5762100 8159900 60769 367 54663 513158;513159;513160;513161;513162;513163;513164;513165;513166;513167;513168;513169 407341;407342;407343;407344;407345;407346;407347;407348 407341 6 YPDANPNPNEQ Unmodified 1257.5262 0.52619455 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.18 2.59 1 10 1 1 1 1 1 1 1 1 1 1 1 34.108 34.81 2 0.00070404 70896 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 96.618 93.21 102270000 8719600 0 0 0 4352100 7208600 6015900 0 7205100 11427000 11113000 14250000 10654000 7772600 13556000 60770 2431 54664 513170;513171;513172;513173;513174;513175;513176;513177;513178;513179;513180 407349;407350;407351;407352;407353;407354 407351 6 YPDEAPLYEIFSQENLEDNDVSDILK Unmodified 3055.4186 0.41860775 4391 Q9H446 RWDD1 RWD domain-containing protein 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 99.409 95.377 3 2.3628E-08 117671 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 67.478 61.697 23456000 0 23456000 0 0 0 0 0 0 0 0 0 0 0 0 0 60771 4391 54665 513181;513182 407355;407356;407357 407355 3 YPDENGFDAFLK Unmodified 1414.6405 0.64049603 375 O43847 NRD1 Nardilysin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82.488 82.025 2 0.0046222 94837 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 72.321 59.531 419060000 0 325600000 9422700 2687800 2658500 4263000 3478900 5680500 3679800 5658400 8892000 9999500 4875400 8021100 24139000 60772 375 54666 513183;513184;513185;513186;513187;513188;513189;513190;513191;513192;513193;513194;513195;513196 407358;407359;407360;407361;407362;407363;407364 407360 6 YPDILNFVDDLEPLDK Unmodified 1904.9408 0.94076037 4630 Q9NSV4 DIAPH3 Protein diaphanous homolog 3 yes yes 0 0 0 By MS/MS By MS/MS 2.25 0.433 3 1 1 3 100.85 95.611 2 7.4911E-57 119490 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 192.18 164.75 47416000 24208000 23208000 0 0 0 0 0 0 0 0 0 0 0 0 0 60773 4630 54667 513197;513198;513199;513200 407365;407366;407367;407368;407369;407370 407370 6 YPDLYPQEDEDEEEEREK Unmodified 2311.9604 0.96044577 3333 Q8N4Q1 CHCHD4 Mitochondrial intermembrane space import and assembly protein 40 yes yes 0 0 1 By MS/MS 2 0 1 1 59.855 51.629 3 4.2858E-05 70022 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 76.713 64.222 6248100 6248100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60774 3333 54668 513201 407371 407371 1 YPDRVPVIVEK Unmodified 1313.7343 0.73433683 1812 P60520;Q9H0R8 GABARAPL2;GABARAPL1 Gamma-aminobutyric acid receptor-associated protein-like 2;Gamma-aminobutyric acid receptor-associated protein-like 1 no no 0 0 1 By MS/MS By MS/MS By MS/MS 2.4 0.49 3 2 2 2 1 63.554 57.969 3 0.0024553 78258 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.182 61.096 338260000 234240000 64895000 39119000 0 0 0 0 0 0 0 0 0 0 0 0 60775 1812 54669 513202;513203;513204;513205;513206 407372;407373;407374;407375 407374 4 YPDYEVTWANDGY Unmodified 1591.6467 0.64670362 4613 Q9NRX4 PHPT1 14 kDa phosphohistidine phosphatase yes yes 0 0 0 By MS/MS By MS/MS 2 0.816 1 1 1 1 2 90.75 89.84 2 0.002089 90191 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_1 80.986 77.223 180100000 35067000 145030000 0 0 0 0 0 0 0 0 0 0 0 0 0 60776 4613 54670 513207;513208;513209 407376;407377 407377 2 YPEAPPFVR Unmodified 1074.5498 0.54983053 2279 Q13404 UBE2V1 Ubiquitin-conjugating enzyme E2 variant 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 65.331 65.341 2 0.0032202 73960 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 129.4 100.25 172200000 0 0 0 12834000 8053600 31511000 0 12449000 0 28118000 0 23294000 0 0 55945000 60777 2279 54671 513210;513211;513212;513213;513214;513215;513216;513217 407378;407379;407380;407381;407382;407383;407384;407385;407386;407387 407382 9 YPEAPPSVR Unmodified 1014.5134 0.51344502 2585 Q15819 UBE2V2 Ubiquitin-conjugating enzyme E2 variant 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 38.611 38.017 2 0.0036824 42292 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 95.741 46.152 416000000 0 115580000 0 12697000 9602800 39413000 0 18020000 10554000 34888000 37628000 28861000 18962000 26050000 63741000 60778 2585 54672 513218;513219;513220;513221;513222;513223;513224;513225;513226;513227;513228;513229;513230 407388;407389;407390;407391;407392;407393;407394;407395 407392 8 YPEAPPSVRFVTK Unmodified 1489.7929 0.79291434 2585 Q15819 UBE2V2 Ubiquitin-conjugating enzyme E2 variant 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.33 0.471 2 1 1 1 1 68.318 62.75 3 0.008549 76831 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 53.001 43.158 498810000 488720000 5987200 4100300 0 0 0 0 0 0 0 0 0 0 0 0 60779 2585 54673 513231;513232;513233 407396;407397 407396 2 YPEAQSVASDILR Unmodified 1447.7307 0.73070802 4035 Q99615 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 15 1 1 1 2 1 1 1 1 2 1 1 2 75.213 75.31 2 1.2433E-12 86403 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 149.96 137.8 140430000 0 0 0 3962700 5528100 7323700 11046000 8049000 5743300 13551000 11043000 17974000 6396300 12339000 37468000 60780 4035 54674 513234;513235;513236;513237;513238;513239;513240;513241;513242;513243;513244;513245;513246;513247;513248 407398;407399;407400;407401;407402;407403;407404;407405;407406 407400 9 YPEGSDQER Unmodified 1079.452 0.45196697 2150 Q08188 TGM3 Protein-glutamine gamma-glutamyltransferase E;Protein-glutamine gamma-glutamyltransferase E 50 kDa catalytic chain;Protein-glutamine gamma-glutamyltransferase E 27 kDa non-catalytic chain yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 10.107 10.217 2 0.01588 8635 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 111.74 87.107 109890000 0 0 0 21839000 5741300 10857000 8561700 12295000 5698000 9241800 0 15428000 7599300 7334800 5294300 60781 2150 54675 513249;513250;513251;513252;513253;513254;513255;513256;513257;513258;513259 407407;407408 407408 0 YPEGSDQERQVFQK Unmodified 1709.8009 0.80091285 2150 Q08188 TGM3 Protein-glutamine gamma-glutamyltransferase E;Protein-glutamine gamma-glutamyltransferase E 50 kDa catalytic chain;Protein-glutamine gamma-glutamyltransferase E 27 kDa non-catalytic chain yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 36.869 36.966 3 0.0058528 40864 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 41.644 29.498 70822000 0 0 0 18426000 3276600 3357100 3431200 9542200 4315100 9454100 0 8236700 7161700 3621100 0 60782 2150 54676 513260;513261;513262;513263;513264;513265;513266;513267;513268;513269 407409;407410;407411 407409 2 YPEHAIHK Unmodified 993.50321 0.50321468 1333 P33992 MCM5 DNA replication licensing factor MCM5 yes yes 0 0 0 By matching By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 10.705 8.9714 2 0.0024401 12183 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 124.83 73.869 90812000 0 13688000 71455000 0 0 0 0 0 0 0 5668100 0 0 0 0 60783 1333 54677 513270;513271;513272 407412;407413;407414 407413 3 YPELQNLPQELFAVDPTTVSQGLK Unmodified 2686.3854 0.38539754 5033 Q9UNI6 DUSP12 Dual specificity protein phosphatase 12 yes yes 0 0 0 By MS/MS 2 0 1 1 99.126 94.391 3 8.5292E-08 116678 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.052 60.794 36524000 0 36524000 0 0 0 0 0 0 0 0 0 0 0 0 0 60784 5033 54678 513273 407415 407415 1 YPENFFLLR Unmodified 1197.6182 0.61824444 1873;1872;1381 P62140;P62136;P36873 PPP1CB;PPP1CA;PPP1CC Serine/threonine-protein phosphatase PP1-beta catalytic subunit;Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 86.366 86.435 2 0.0029277 100123 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 125.25 108.48 126420000 0 0 0 2258100 2415900 9202200 3349500 6658800 7706400 8246100 9186400 9429900 5525400 10371000 52074000 60785 1873;1872;1381 54679 513274;513275;513276;513277;513278;513279;513280;513281;513282;513283;513284;513285 407416;407417;407418;407419;407420;407421;407422;407423;407424;407425;407426;407427 407420 12 YPESLRPAFPR Unmodified 1331.6986 0.69862003 193 O14617 AP3D1 AP-3 complex subunit delta-1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.175 59.285 3 0.0041192 67549 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 57.347 47.039 339560000 0 0 0 18346000 15284000 26770000 18853000 26549000 18524000 25111000 24189000 47843000 24227000 37354000 56507000 60786 193 54680 513286;513287;513288;513289;513290;513291;513292;513293;513294;513295;513296;513297 407428;407429;407430;407431;407432;407433 407430 5 YPETTEGGRPK Unmodified 1233.599 0.59896556 1179 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching By matching 7.65 3.65 5 12 2 1 2 1 1 1 1 1 1 1 1 1 1 1 1 13.242 12.399 2;3 0.00013728 15284 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 129.42 108.55 149310000 15116000 13493000 52409000 3786000 4138400 5788800 4419000 4368400 3193900 5431400 6944100 8208500 6948900 6992100 8068800 60787 1179 54681 513298;513299;513300;513301;513302;513303;513304;513305;513306;513307;513308;513309;513310;513311;513312;513313;513314 407434;407435;407436;407437 407435 3 YPFEELSQGQQLCK Unmodified 1725.8032 0.80322103 2729 Q5HYJ3 FAM76B Protein FAM76B yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 19.341 19.626 4 0.028578 20305 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 29.328 3.738 37279000 0 0 0 0 0 0 12856000 0 0 0 0 0 0 0 24423000 60788 2729 54682 513315;513316 407438;407439 407438 2 YPFESAEAQLLNK Unmodified 1508.7511 0.75110911 1171 P23921 RRM1 Ribonucleoside-diphosphate reductase large subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 78.577 78.681 2 1.1458E-12 90799 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 128.01 113.6 114020000 0 0 0 0 4103800 10903000 9374100 8901400 5783100 11684000 13528000 14040000 7456000 9390600 18852000 60789 1171 54683 513317;513318;513319;513320;513321;513322;513323;513324;513325;513326;513327 407440;407441;407442;407443;407444;407445;407446;407447;407448;407449;407450 407441 10 YPFILPHQQVDK Unmodified 1483.7823 0.78234966 4990 Q9ULC4 MCTS1 Malignant T-cell-amplified sequence 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.5 3.71 5 11 2 1 2 1 1 1 1 1 1 1 1 1 1 1 70.019 68.418 2;3 3.6043E-13 91411 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 167.93 148.67 548380000 339910000 44125000 32079000 0 3362200 16063000 6350200 5971000 4824200 11199000 11349000 12977000 9225100 15046000 35899000 60790 4990 54684 513328;513329;513330;513331;513332;513333;513334;513335;513336;513337;513338;513339;513340;513341;513342;513343 407451;407452;407453;407454;407455;407456;407457;407458;407459;407460;407461;407462 407457 11 YPGGESYQDLVQR Unmodified 1510.7052 0.70522155 433 O60825 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.07 60.175 2 2.3105E-13 68586 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 170.89 125.73 172580000 0 0 0 9064600 13266000 15282000 14320000 13644000 10695000 18064000 16475000 16068000 13026000 13393000 19281000 60791 433 54685 513344;513345;513346;513347;513348;513349;513350;513351;513352;513353;513354;513355 407463;407464;407465;407466;407467;407468;407469;407470;407471 407468 9 YPHLQVIGGNVVTAAQAK Unmodified 1865.0159 0.015931421 1114 P20839 IMPDH1 Inosine-5'-monophosphate dehydrogenase 1 yes yes 0 0 0 By MS/MS By matching By matching By matching By matching By MS/MS 8.67 2.98 1 5 1 1 1 1 1 1 74.755 73.531 3 0.0041201 84345 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 34.87 29.966 48516000 17814000 0 0 0 0 1630200 0 3915000 0 3398500 0 0 0 4173200 17585000 60792 1114 54686 513356;513357;513358;513359;513360;513361 407472;407473 407472 2 YPHQLDQK Unmodified 1027.5087 0.50869399 2582 Q15813 TBCE Tubulin-specific chaperone E yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.33 0.471 2 1 1 1 1 20.426 16.696 2 0.0026636 21384 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 169.57 106.85 113270000 68281000 3427000 41558000 0 0 0 0 0 0 0 0 0 0 0 0 60793 2582 54687 513362;513363;513364 407474;407475;407476;407477 407477 4 YPHYFPLLK Unmodified 1176.6332 0.63316622 1704 P52888 THOP1 Thimet oligopeptidase yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 76.727 76.934 3 0.0093978 88171 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.96 47.673 16079000 0 0 0 0 0 0 0 0 0 0 0 0 0 1336900 14742000 60794 1704 54688 513365;513366 407478 407478 1 YPIEHGIITNWDDMEK Oxidation (M) 1975.8986 0.89857798 1958 P68032;P63267;P68133;P62736 ACTC1;ACTG2;ACTA1;ACTA2 Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, aortic smooth muscle yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.41 3.97 1 29 2 39 10 11 11 4 4 2 4 3 3 3 4 2 4 2 4 70.537 69.513 2;3 1.4492E-56 78339 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 168.61 155.02 46854000000 3681300000 12039000000 6262800000 927930000 1003600000 199380000 1509400000 1906400000 2277000000 2552500000 2397300000 3393000000 1772800000 2094000000 4837200000 60795 1958 54689 513367;513368;513369;513370;513371;513372;513373;513374;513375;513376;513377;513378;513379;513380;513381;513382;513383;513384;513385;513386;513387;513388;513389;513390;513391;513392;513393;513394;513395;513396;513397;513398;513399;513400;513401;513402;513403;513404;513405;513406;513407;513408;513409;513410;513411;513412;513413;513414;513415;513416;513417;513418;513419;513420;513421;513422;513423;513424;513425;513426;513427;513428;513429;513430;513431;513432;513433;513434;513435;513436;513437 407479;407480;407481;407482;407483;407484;407485;407486;407487;407488;407489;407490;407491;407492;407493;407494;407495;407496;407497;407498;407499;407500;407501;407502;407503;407504;407505;407506;407507;407508;407509;407510;407511;407512;407513;407514;407515;407516;407517;407518;407519;407520;407521;407522;407523;407524;407525;407526;407527;407528;407529;407530;407531;407532;407533;407534;407535;407536;407537;407538;407539 407508 3144 55 YPIEHGIITNWDDMEK Unmodified 1959.9037 0.90366336 1958 P68032;P63267;P68133;P62736 ACTC1;ACTG2;ACTA1;ACTA2 Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, aortic smooth muscle yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.66 3.98 2 14 1 24 8 7 2 2 2 2 2 2 2 2 2 2 2 2 2 79.794 78.634 2;3 2.7596E-57 94714 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 217.12 185.94 24514000000 3875600000 13570000000 1325200000 31370000 67454000 469090000 48583000 340540000 268980000 271830000 264770000 329090000 120150000 259960000 3271300000 60796 1958 54689 513438;513439;513440;513441;513442;513443;513444;513445;513446;513447;513448;513449;513450;513451;513452;513453;513454;513455;513456;513457;513458;513459;513460;513461;513462;513463;513464;513465;513466;513467;513468;513469;513470;513471;513472;513473;513474;513475;513476;513477;513478 407540;407541;407542;407543;407544;407545;407546;407547;407548;407549;407550;407551;407552;407553;407554;407555;407556;407557;407558;407559;407560;407561;407562;407563;407564;407565;407566;407567;407568;407569;407570;407571;407572;407573;407574;407575;407576 407545 36 YPIEHGIVTNWDDMEK Oxidation (M) 1961.8829 0.88292792 1951;1815 P60709;P63261 ACTB;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed no no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 67.904 68.046 2;3 7.466E-11 77264 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 93.738 89.636 312220000 0 0 0 0 16178000 51798000 0 0 0 30124000 34922000 51038000 32608000 32513000 63038000 60797 1815;1951 54690 513479;513480;513481;513482;513483;513484;513485;513486;513487 407577;407578;407579;407580;407581;407582;407583;407584;407585;407586;407587;407588 407583 2947 11 YPIEHGIVTNWDDMEK Unmodified 1945.888 0.88801329 1951;1815 P60709;P63261 ACTB;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed no no 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 79.636 75.966 3 3.9748E-06 94484 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.657 85.753 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60798 1815;1951 54690 513488;513489 407589;407590 407589 2 YPIREDLLK Unmodified 1145.6445 0.64445919 5134 Q9Y315 DERA Deoxyribose-phosphate aldolase yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 63.777 57.744 3 0.014393 77817 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.692 15.247 79510000 67696000 0 11814000 0 0 0 0 0 0 0 0 0 0 0 0 60799 5134 54691 513490;513491 407591 407591 1 YPIVGYTAR Unmodified 1038.5498 0.54983053 5020 Q9UMX5 NENF Neudesin yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By matching By MS/MS 10 0 6 1 1 1 1 1 1 52.499 52.884 2 0.0098768 58653 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 65.465 46.735 83543000 0 0 0 0 0 0 0 4046900 2909700 0 15455000 19031000 0 9170600 32930000 60800 5020 54692 513492;513493;513494;513495;513496;513497 407592;407593 407592 2 YPLFEGQETGKK Unmodified 1395.7034 0.70343063 1440 P41250 GARS Glycine--tRNA ligase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 43.477 43.489 3 2.4294E-06 47706 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 109.72 93.696 50454000 0 0 0 5418700 4926000 0 0 0 0 0 0 26066000 14043000 0 0 60801 1440 54693 513498;513499;513500;513501 407594 407594 1 YPLIIVSEEIEYLLK Unmodified 1821.0176 0.01755413 4890 Q9UH65 SWAP70 Switch-associated protein 70 yes yes 0 0 0 By MS/MS 2 0 1 1 103.83 95.702 2 0.00023546 122890 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.801 89.821 7885300 7885300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60802 4890 54694 513502 407595 407595 1 YPLLISR Unmodified 860.51199 0.51198846 3693 Q92974 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 63.044 63.14 2 8.3774E-17 72336 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 175.93 130.96 478190000 0 0 0 20833000 26154000 42881000 36874000 37294000 24999000 40000000 50846000 56852000 41431000 37664000 62359000 60803 3693 54695 513503;513504;513505;513506;513507;513508;513509;513510;513511;513512;513513;513514 407596;407597;407598;407599;407600;407601;407602;407603 407601 7 YPLLLDNIAK Unmodified 1158.6649 0.66486028 4778 Q9NZN5 ARHGEF12 Rho guanine nucleotide exchange factor 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83.125 82.148 2 0.003743 94701 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.378 57.993 123850000 25193000 29155000 5144400 2244100 2420400 5011200 4241500 4479700 2774500 7295200 6654500 9002700 3783500 5114200 11337000 60804 4778 54696 513515;513516;513517;513518;513519;513520;513521;513522;513523;513524;513525;513526;513527;513528;513529 407604;407605;407606;407607;407608;407609;407610;407611;407612;407613;407614;407615;407616 407607 13 YPLLLQSIGQNTEEPTER Unmodified 2087.0535 0.053498719 3679 Q92888 ARHGEF1 Rho guanine nucleotide exchange factor 1 yes yes 0 0 0 By MS/MS 10 0 1 1 83.149 83.324 2 0.011449 96330 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 40.475 26.218 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60805 3679 54697 513530 407617 407617 1 YPLLLQSIGQNTEEPTEREK Unmodified 2344.1911 0.19105483 3679 Q92888 ARHGEF1 Rho guanine nucleotide exchange factor 1 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 8.86 2.8 1 6 1 1 1 1 1 1 1 79.241 78.208 3 2.6643E-10 100364 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 65.887 63.046 92085000 34235000 0 0 0 0 9510300 0 0 4138100 0 17153000 7237200 3964500 0 15847000 60806 3679 54698 513531;513532;513533;513534;513535;513536;513537 407618;407619;407620;407621 407620 4 YPLNCADPTSER Unmodified 1421.6245 0.62452839 2122 Q06124 PTPN11 Tyrosine-protein phosphatase non-receptor type 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 40.725 40.847 2 2.6601E-05 44559 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 99.973 88.126 52405000 0 0 0 5122400 2348600 5067400 4693000 0 3134200 5139800 5568200 0 7344100 4346100 9641500 60807 2122 54699 513538;513539;513540;513541;513542;513543;513544;513545;513546;513547 407622;407623;407624;407625;407626;407627;407628;407629;407630;407631 407625 10 YPLPPPSGR Unmodified 982.52362 0.52361577 4323 Q9H0D6 XRN2 5'-3' exoribonuclease 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 41.968 42.229 2 0.015689 46012 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 57.177 29.071 56461000 0 0 0 0 6811500 4089200 4404500 5161500 0 0 6494400 8171200 6402300 5272600 9653600 60808 4323 54700 513548;513549;513550;513551;513552;513553;513554;513555;513556 407632;407633;407634;407635 407633 4 YPLPVFSTFVLTGSSAK Unmodified 1812.9662 0.96618726 2830 Q5VZ89 DENND4C DENN domain-containing protein 4C yes yes 0 0 0 By MS/MS 10 0 1 1 96.386 96.54 2 0.0011361 112043 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 66.262 57.533 1138400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1138400 60809 2830 54701 513557 407636 407636 1 YPMAYVDYK Oxidation (M) 1164.5161 0.51614714 2577 Q15785 TOMM34 Mitochondrial import receptor subunit TOM34 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 47.953 48.116 2 0.0024087 54047 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 89.355 67.224 131690000 0 0 0 8551700 12774000 7491400 12687000 7617300 9726400 10724000 13014000 16278000 12519000 7946000 12359000 60810 2577 54702 513558;513559;513560;513561;513562;513563;513564;513565;513566;513567;513568;513569 407637;407638;407639;407640;407641;407642;407643;407644;407645;407646;407647 407641 4226 6 YPMAYVDYK Unmodified 1148.5212 0.52123251 2577 Q15785 TOMM34 Mitochondrial import receptor subunit TOM34 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 7.82 3.56 3 8 1 1 1 1 1 1 1 1 1 1 1 60.85 59.182 2 0.0032531 67731 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 90.657 78.301 409890000 11058000 312080000 4532900 7806100 7934800 8909000 11605000 15282000 7065900 14090000 0 0 9527900 0 0 60811 2577 54702 513570;513571;513572;513573;513574;513575;513576;513577;513578;513579;513580 407648;407649;407650;407651;407652 407648 4 YPNAELAWCQEEHK Unmodified 1773.7781 0.77806891 2071 Q02218 OGDH 2-oxoglutarate dehydrogenase, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 62.254 58.491 3 0.049123 72622 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 27.335 19.803 4740500 0 0 4740500 0 0 0 0 0 0 0 0 0 0 0 0 60812 2071 54703 513581 407653 407653 1 YPNLQVIGGNVVTAAQAK Unmodified 1841.9999 0.99994701 964 P12268 IMPDH2 Inosine-5'-monophosphate dehydrogenase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By matching 7.47 3.59 3 2 10 1 4 1 1 1 1 1 1 1 1 1 1 82.693 81.145 2;3 9.7801E-33 93591 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 120.87 97.993 138950000 6828200 60195000 0 0 2422700 5510900 0 5865600 3439300 8326600 10859000 7004300 2399700 4906800 21193000 60813 964 54704 513582;513583;513584;513585;513586;513587;513588;513589;513590;513591;513592;513593;513594;513595;513596 407654;407655;407656;407657;407658;407659;407660;407661 407660 7 YPNPEEGK Unmodified 932.42396 0.42396131 3844 Q96G03 PGM2 Phosphoglucomutase-2 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 21.213 17.443 2 0.0024352 22542 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 130.04 99.321 75176000 0 75176000 0 0 0 0 0 0 0 0 0 0 0 0 0 60814 3844 54705 513597;513598 407662;407663;407664;407665 407664 4 YPPHLNPQDPLK Unmodified 1417.7354 0.73539946 869 P08651 NFIC Nuclear factor 1 C-type yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 1 1 1 1 1 1 1 2 1 1 1 56.058 56.22 3 0.0081993 64209 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 49.934 38.401 150360000 0 0 0 5480800 4749900 8264100 7525200 8340900 5914900 20140000 14901000 27752000 12622000 12943000 21726000 60815 869 54706 513599;513600;513601;513602;513603;513604;513605;513606;513607;513608;513609;513610;513611 407666;407667;407668;407669;407670;407671;407672;407673;407674;407675;407676 407671 7 YPPHSLSYPVQIAR Unmodified 1626.8518 0.85182621 5262 Q9Y618 NCOR2 Nuclear receptor corepressor 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.061 66.145 3 0.0023085 75230 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 47.712 41.817 70419000 0 0 0 2363900 2631400 4212700 5062900 4961200 4415800 6641700 7344500 9456500 5142900 6173000 12012000 60816 5262 54707 513612;513613;513614;513615;513616;513617;513618;513619;513620;513621;513622;513623 407677;407678;407679;407680;407681;407682;407683;407684;407685;407686 407680 9 YPPQEAEQLSHQAAPGPR Unmodified 1974.9548 0.95478773 580 O94761 RECQL4 ATP-dependent DNA helicase Q4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 2 1 47.455 47.628 3 6.1915E-21 54443 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 104.44 93.97 165210000 0 0 0 8282900 13095000 0 9079200 11845000 8737100 19896000 19025000 24124000 15669000 14421000 21040000 60817 580 54708 513624;513625;513626;513627;513628;513629;513630;513631;513632;513633;513634;513635 407687;407688;407689;407690;407691;407692;407693;407694;407695;407696;407697;407698;407699;407700;407701;407702;407703 407702 16 YPPSATTLHFEFYADPGAEVK Unmodified 2339.111 0.1110136 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS 2 0 1 1 89.535 81.404 3 9.0532E-05 105632 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 62.002 48.019 30433000 30433000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60818 3119 54709 513636 407704 407704 1 YPPYTTPPR Unmodified 1090.5447 0.54474515 378 O43896 KIF1C Kinesin-like protein KIF1C yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 40.118 40.201 2 0.0077875 44114 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 71.501 25.783 74002000 0 0 0 11222000 7510500 8427500 0 6221400 0 15669000 11002000 13951000 0 0 0 60819 378 54710 513637;513638;513639;513640;513641;513642;513643 407705;407706;407707;407708;407709;407710 407708 6 YPQLLPGIR Unmodified 1055.6128 0.61276513 1164 P23526 AHCY Adenosylhomocysteinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 77.859 77.918 2 0.0030689 89617 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 91.906 73.176 291600000 0 0 0 13312000 5192000 9092700 6304000 10992000 6964500 11674000 44510000 32599000 8016700 25596000 117340000 60820 1164 54711 513644;513645;513646;513647;513648;513649;513650;513651;513652;513653;513654;513655 407711;407712;407713;407714;407715;407716;407717;407718;407719;407720;407721;407722 407715 12 YPSATNNTPAK Unmodified 1162.5619 0.56185177 3518 Q8TEQ6 GEMIN5 Gem-associated protein 5 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 20.7 16.433 2 0.0014754 21659 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.496 73.235 72454000 4393300 68060000 0 0 0 0 0 0 0 0 0 0 0 0 0 60821 3518 54712 513656;513657 407723;407724 407723 2 YPSHSFIGEESVAAGEK Unmodified 1806.8424 0.84244331 1244 P29218 IMPA1 Inositol monophosphatase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 4.36 3.47 6 2 3 3 3 2 1 1 1 57.787 53.688 3 4.5443E-05 66095 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 90.561 80.315 926930000 402970000 234660000 271020000 0 0 2330800 0 0 0 0 0 0 0 6669400 9286000 60822 1244 54713 513658;513659;513660;513661;513662;513663;513664;513665;513666;513667;513668 407725;407726;407727;407728;407729;407730;407731;407732;407733;407734;407735 407730 9 YPSIIVNCVEEK Unmodified 1449.7174 0.71736614 4323 Q9H0D6 XRN2 5'-3' exoribonuclease 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS 6.25 3.77 1 1 2 1 1 1 1 71.372 70.362 2 0.0056036 79939 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.751 36.913 11107000 0 2585800 0 0 0 0 0 0 0 0 0 0 0 3719000 4802100 60823 4323 54714 513669;513670;513671;513672 407736;407737;407738;407739 407736 4 YPSLGQK Unmodified 791.41775 0.41775372 365 O43768 ENSA Alpha-endosulfine yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 31.092 26.609 2 0.021476 36492 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 109.7 73.117 319480000 140560000 173050000 5868300 0 0 0 0 0 0 0 0 0 0 0 0 60824 365 54715 513673;513674;513675;513676 407740;407741;407742;407743;407744 407742 5 YPSLGQKPGGSDFLMK Unmodified 1723.8603 0.86034198 365 O43768 ENSA Alpha-endosulfine yes yes 0 0 1 By MS/MS 2 0 1 1 78.015 69.884 3 0.013428 92015 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 38.889 24.42 14995000 14995000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60825 365 54716 513677 407745 407745 1 YPSLLLHSQEEK Unmodified 1442.7405 0.74054442 3250 Q8IWZ3 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 2 1 1 1 1 1 1 1 1 1 1 1 57.185 56.079 2;3 1.9046E-05 79330 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 91.858 81.432 114020000 39371000 0 0 0 3804900 5748800 5651900 6321700 6479300 6554300 8718900 8932100 7214800 6718800 8507300 60826 3250 54717 513678;513679;513680;513681;513682;513683;513684;513685;513686;513687;513688;513689;513690 407746;407747;407748;407749;407750;407751;407752;407753 407748 5 YPSPFFVFGEK Unmodified 1316.6441 0.64412484 2152 Q08211 DHX9 ATP-dependent RNA helicase A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 90.326 89.421 2 0.00059879 103075 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 79.974 67.927 93460000 32675000 0 1473500 2820000 0 7774100 2455200 4877900 0 8946100 0 6019900 3773800 6319500 16325000 60827 2152 54718 513691;513692;513693;513694;513695;513696;513697;513698;513699;513700;513701 407754;407755;407756;407757;407758;407759;407760;407761;407762;407763;407764;407765;407766;407767;407768;407769 407762 15 YPSPPMGSVSAPNLPTAEDNLEYVR Oxidation (M) 2719.2799 0.27994619 1500 P46109 CRKL Crk-like protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 81.403 81.571 3 7.4992E-13 94358 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 59.429 52.152 50644000 0 0 0 0 0 0 0 0 0 0 12882000 12234000 0 6439000 19090000 60828 1500 54719 513702;513703;513704;513705 407770;407771;407772;407773 407771 2370 4 YPSSPYSAHISK Unmodified 1335.6459 0.64591575 3745 Q96AY4 TTC28 Tetratricopeptide repeat protein 28 yes yes 0 0 0 By MS/MS 2 0 1 1 44.082 37.216 3 0.0055074 51195 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 56.414 44.494 57350000 57350000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60829 3745 54720 513706 407774 407774 1 YPSSVSAITDIK Unmodified 1279.666 0.66598249 3220 Q8IUR7 ARMC8 Armadillo repeat-containing protein 8 yes yes 0 0 0 By MS/MS 2 0 1 1 73.178 67.634 2 0.010364 85261 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.775 65.168 240060000 0 240060000 0 0 0 0 0 0 0 0 0 0 0 0 0 60830 3220 54721 513707 407775 407775 1 YPSYGLNYYQQK Unmodified 1522.7092 0.70924429 62 CON__P02668 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 62.145 62.154 2 2.0402E-115 71012 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 249.69 216.69 + 126110000 0 0 0 8279600 20216000 16652000 48101000 10229000 0 5444800 8859000 8327800 0 0 0 60831 62 54722 513708;513709;513710;513711;513712;513713;513714;513715 407776;407777;407778;407779;407780;407781 407777 6 YPTEGISHVTSPSSDVIQK Unmodified 2044.0113 0.011299553 2928 Q6P2H3 CEP85 Centrosomal protein of 85 kDa yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.17 3.85 2 1 3 2 1 1 1 1 59.684 57.344 3 5.7132E-18 73926 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.74 90.368 88007000 0 58030000 12585000 0 0 0 6216200 6323200 0 4852000 0 0 0 0 0 60832 2928 54723 513716;513717;513718;513719;513720;513721 407782;407783;407784;407785 407782 4 YPTFIDALR Unmodified 1094.576 0.57604528 167 O00541 PES1 Pescadillo homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 82.207 82.239 2 0.013807 95149 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 59.245 35.817 17183000 0 0 0 1660100 1239400 2760000 916220 1134900 1408000 2692100 0 0 1264100 0 4108400 60833 167 54724 513722;513723;513724;513725;513726;513727;513728;513729;513730 407786;407787;407788;407789;407790;407791 407786 6 YPTQSGKPPLLVSAPSK Unmodified 1768.9723 0.97233527 4302 Q9GZR7 DDX24 ATP-dependent RNA helicase DDX24 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 58.23 58.258 3 0.017753 66773 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 29.687 24.986 62835000 0 0 0 5442300 6790100 6883500 7099700 5553200 6543600 0 9810400 14713000 0 0 0 60834 4302 54725 513731;513732;513733;513734;513735;513736;513737;513738 407792;407793;407794 407794 3 YPVGVHFLPK Unmodified 1155.6441 0.64406526 1164 P23526 AHCY Adenosylhomocysteinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 4 20 2 1 1 2 2 2 1 2 2 2 2 1 2 2 67.34 66.458 2;3 0.0054791 74470 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.787 53.922 498940000 206230000 34000000 9264000 0 2516700 9370900 4521300 6485900 4410600 8701500 23991000 30753000 5657500 21141000 131900000 60835 1164 54726 513739;513740;513741;513742;513743;513744;513745;513746;513747;513748;513749;513750;513751;513752;513753;513754;513755;513756;513757;513758;513759;513760;513761;513762 407795;407796;407797;407798;407799;407800;407801;407802;407803 407797 9 YPVNSVNILK Unmodified 1145.6445 0.64445919 1067 P17987 TCP1 T-complex protein 1 subunit alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.055 66.139 2 0.00054449 76787 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 146.23 53.761 1724600000 0 0 0 58562000 59241000 137420000 81961000 86544000 56388000 162390000 219870000 217400000 105920000 153260000 385610000 60836 1067 54727 513763;513764;513765;513766;513767;513768;513769;513770;513771;513772;513773;513774 407804;407805;407806;407807;407808;407809;407810;407811;407812;407813;407814;407815;407816 407815 13 YPVPENWLHK Unmodified 1281.6506 0.6506072 1405 P39748 FEN1 Flap endonuclease 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.34 3.24 6 23 2 2 2 2 2 2 2 2 2 2 2 2 1 2 2 69.747 68.693 2;3 5.094E-05 90858 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 138.98 105.6 1519600000 809070000 183170000 64617000 14824000 8187400 65148000 22915000 29802000 27944000 49293000 43556000 51671000 12258000 34795000 102390000 60837 1405 54728 513775;513776;513777;513778;513779;513780;513781;513782;513783;513784;513785;513786;513787;513788;513789;513790;513791;513792;513793;513794;513795;513796;513797;513798;513799;513800;513801;513802;513803 407817;407818;407819;407820;407821;407822;407823;407824;407825;407826;407827 407823 10 YPVQVPYK Unmodified 992.53312 0.53311783 4904 Q9UHL9 GTF2IRD1 General transcription factor II-I repeat domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 52.936 52.584 2 0.010595 58867 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 79.146 53.319 69572000 0 24070000 0 0 0 4697200 0 0 2279200 5692600 5438800 8027600 6845400 4676600 7844800 60838 4904 54729 513804;513805;513806;513807;513808;513809;513810;513811;513812 407828;407829;407830;407831;407832;407833 407833 6 YPVSSREATQILSVPK Unmodified 1773.9625 0.96249887 1446 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 77.215 70.731 3 0.00080534 91166 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 63.062 59.168 213750000 184880000 28871000 0 0 0 0 0 0 0 0 0 0 0 0 0 60839 1446 54730 513813;513814 407834;407835 407835 2 YPVVHIGK Unmodified 911.52289 0.52288749 159 O00469 PLOD2 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 49.61 43.689 2 0.016417 60644 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 92.191 73.526 52326000 41332000 0 10994000 0 0 0 0 0 0 0 0 0 0 0 0 60840 159 54731 513815;513816 407836 407836 1 YPVYGVQWHPEK Unmodified 1501.7354 0.73539946 3667 Q92820 GGH Gamma-glutamyl hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63.536 62.762 3 0.00065664 71231 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 55.291 48.252 177670000 53677000 0 7924100 15847000 3172800 8323800 4552400 15758000 5343500 7702500 7793000 15291000 6370000 8009900 17907000 60841 3667 54732 513817;513818;513819;513820;513821;513822;513823;513824;513825;513826;513827;513828;513829;513830 407837;407838;407839;407840;407841;407842;407843;407844;407845;407846;407847;407848;407849;407850 407845 11 YPYHLMLQK Unmodified 1191.6111 0.61105057 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 59.672 58.159 3 0.011327 65004 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 55.37 35.229 86770000 22434000 13595000 0 0 0 0 0 3135600 3736700 0 6602100 9198400 0 7265200 20803000 60842 3119 54733 513831;513832;513833;513834;513835;513836;513837;513838 407851;407852;407853;407854;407855;407856 407854 6 YPYHLMLQK Oxidation (M) 1207.606 0.6059652 3119 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 4.67 3.77 2 1 1 1 1 59.154 53.1 3 0.020449 56438 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 51.346 22.388 27294000 24198000 0 3095300 0 0 0 0 0 0 0 0 0 0 0 0 60843 3119 54733 513839;513840;513841 407857;407858 407858 2 YPYMVEWYTK Oxidation (M) 1394.6217 0.62167484 4334 Q9H0P0 NT5C3A Cytosolic 5'-nucleotidase 3A yes yes 0 1 0 By MS/MS 2 0 1 1 79.461 71.331 2 0.013246 93707 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 68.657 41.403 12472000 12472000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60844 4334 54734 513842 407859 407859 5798 1 YPYVAVMLK Unmodified 1082.5834 0.58343884 3096 Q7Z4G1 COMMD6 COMM domain-containing protein 6 yes yes 0 0 0 By MS/MS 2 0 1 1 84.831 76.701 2 0.0075459 100143 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.602 74.078 21238000 21238000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60845 3096 54735 513843 407860 407860 1 YPYVAVMLK Oxidation (M) 1098.5784 0.57835346 3096 Q7Z4G1 COMMD6 COMM domain-containing protein 6 yes yes 0 1 0 By MS/MS 2 0 1 1 73.234 70.149 2 0.040891 85856 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 58.604 45.645 3238300 0 0 3238300 0 0 0 0 0 0 0 0 0 0 0 0 60846 3096 54735 513844 407861 407861 1 YPYVCHAELNAIMNK Unmodified 1821.8542 0.85421075 1319 P32321 DCTD Deoxycytidylate deaminase yes yes 0 0 0 By MS/MS 2 0 1 1 79.587 71.457 3 0.00020834 93833 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.703 69.548 13555000 13555000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60847 1319 54736 513845 407862 407862 1 YQADIPEMLLEGESDEREQSK Oxidation (M) 2482.117 0.11696319 4140 Q9BTC8 MTA3 Metastasis-associated protein MTA3 yes yes 0 1 1 By MS/MS By matching By matching By matching By matching By matching 10 0 6 1 1 1 1 1 1 75.976 76.154 3 0.00016882 88078 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 44.105 34.821 32792000 0 0 0 0 0 0 0 0 0 6508000 5669000 4861100 2393000 4162800 9198300 60848 4140 54737 513846;513847;513848;513849;513850;513851 407863 407863 5636 1 YQADITDLLK Unmodified 1178.6183 0.61830402 2272 Q13330 MTA1 Metastasis-associated protein MTA1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 79.897 79.994 2 0.0024208 92539 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 83.783 43.685 87324000 0 0 0 0 4049200 7694700 0 7149000 5483200 11236000 8268200 11842000 6920800 8999500 15681000 60849 2272 54738 513852;513853;513854;513855;513856;513857;513858;513859;513860;513861 407864;407865;407866;407867;407868;407869;407870;407871;407872 407868 9 YQAECSQFK Unmodified 1159.4968 0.49680868 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25.111 24.584 2 0.0030604 26585 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 91.853 78.762 443450000 3614600 39998000 0 166130000 17974000 18357000 17789000 15224000 14872000 23231000 18356000 31189000 36995000 12076000 27637000 60850 1029 54739 513862;513863;513864;513865;513866;513867;513868;513869;513870;513871;513872;513873;513874;513875 407873;407874;407875;407876;407877;407878;407879;407880;407881;407882;407883;407884;407885 407873 13 YQAEIPDR Unmodified 990.47706 0.47705951 583 O94776 MTA2 Metastasis-associated protein MTA2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 34.961 34.969 2 0.030437 38524 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 55.531 26.613 36649000 0 0 0 4715000 3625800 7858100 0 4863500 0 0 8742600 0 0 6843800 0 60851 583 54740 513876;513877;513878;513879;513880;513881 407886;407887 407886 2 YQAEIPDRLVEGESDNRNQQK Unmodified 2488.1942 0.19424273 583 O94776 MTA2 Metastasis-associated protein MTA2 yes yes 0 0 2 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.67 2.98 3 15 1 2 1 2 2 1 1 2 2 1 1 2 54.257 54.047 3;4 4.3337E-21 74024 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 92.307 78.852 425830000 0 0 61020000 22453000 0 48000000 0 39632000 26274000 28102000 43226000 58879000 2654000 9144900 86441000 60852 583 54741 513882;513883;513884;513885;513886;513887;513888;513889;513890;513891;513892;513893;513894;513895;513896;513897;513898;513899 407888;407889;407890;407891;407892;407893;407894;407895;407896;407897;407898;407899;407900;407901;407902;407903 407894 16 YQAIFDNTTSLTDK Unmodified 1615.773 0.77296676 2313 Q13546 RIPK1 Receptor-interacting serine/threonine-protein kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.36 3.15 2 1 11 2 1 1 1 1 1 1 1 1 1 1 1 1 70.303 69.29 2 1.6823E-26 79125 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 153.95 144.94 288610000 0 176990000 4319100 3630600 7428400 9840200 13466000 0 7372400 14227000 16724000 0 0 12529000 22082000 60853 2313 54742 513900;513901;513902;513903;513904;513905;513906;513907;513908;513909;513910;513911;513912;513913 407904;407905;407906;407907;407908;407909;407910;407911;407912;407913;407914;407915;407916;407917;407918 407908 15 YQANITETQR Unmodified 1222.5942 0.59421454 4499 Q9HB96 FANCE Fanconi anemia group E protein yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 26.995 27.252 2 0.0066055 29188 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 64.485 32.164 5978900 0 0 0 0 0 0 0 3704900 0 0 0 0 2274000 0 0 60854 4499 54743 513914;513915 407919 407919 1 YQASHPNLRK Unmodified 1212.6364 0.63635412 683 O95721 SNAP29 Synaptosomal-associated protein 29 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.334 11.448 3 0.024786 9230 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 37.73 31.127 123670000 0 0 0 9453100 6072600 7876700 7636400 8187800 7737900 11152000 0 20634000 12457000 11257000 21209000 60855 683 54744 513916;513917;513918;513919;513920;513921;513922;513923;513924;513925;513926 407920;407921;407922;407923 407920 4 YQAVLPIQTGSLVAAAK Unmodified 1728.9774 0.97742065 2858 Q68DK7 MSL1 Male-specific lethal 1 homolog yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 84.269 84.408 2 0.00038913 97537 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 60.628 46.965 22812000 0 0 0 0 0 0 0 0 0 6356600 0 5306800 0 0 11149000 60856 2858 54745 513927;513928;513929 407924;407925 407925 2 YQAVTATLEEK Unmodified 1251.6347 0.63468237 1415 P40429;Q6NVV1 RPL13A;RPL13AP3 60S ribosomal protein L13a;Putative 60S ribosomal protein L13a protein RPL13AP3 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.12 3.26 2 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 47.097 45.718 2 2.3746E-09 58454 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 169.41 147.94 877480000 14729000 449380000 0 14585000 20955000 22815000 25185000 22527000 22060000 38770000 39264000 65393000 26615000 52267000 62935000 60857 1415 54746 513930;513931;513932;513933;513934;513935;513936;513937;513938;513939;513940;513941;513942;513943;513944;513945 407926;407927;407928;407929;407930;407931;407932;407933;407934;407935;407936;407937;407938;407939;407940;407941;407942 407930 17 YQAYMSNLESHSAILDQK Unmodified 2096.9837 0.98370459 214 O14777 NDC80 Kinetochore protein NDC80 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 76.429 71.158 3 6.8208E-20 90268 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.409 84.774 93595000 41514000 47168000 4912700 0 0 0 0 0 0 0 0 0 0 0 0 60858 214 54747 513946;513947;513948 407943;407944;407945 407943 3 YQAYMSNLESHSAILDQK Oxidation (M) 2112.9786 0.97861922 214 O14777 NDC80 Kinetochore protein NDC80 homolog yes yes 0 1 0 By MS/MS 2 0 1 1 61.702 57.932 3 0.0021308 71916 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 41.422 38.989 6310300 0 0 6310300 0 0 0 0 0 0 0 0 0 0 0 0 60859 214 54747 513949 407946 407946 290 1 YQCVVLTEMK Unmodified 1269.6097 0.60972994 3 A0AVT1 UBA6 Ubiquitin-like modifier-activating enzyme 6 yes yes 0 0 0 By MS/MS 2 0 1 1 69.239 63.37 2 5.8229E-06 80613 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 137.14 115.61 74608000 0 74608000 0 0 0 0 0 0 0 0 0 0 0 0 0 60860 3 54748 513950 407947 407947 1 YQDAETLYK Unmodified 1129.5292 0.52915466 4321 Q9H0B6 KLC2 Kinesin light chain 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36.587 35.906 2 0.0052791 38904 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.149 43.325 303740000 4807900 55523000 0 13357000 14144000 17689000 17796000 16096000 14927000 22858000 24406000 23225000 24498000 20746000 33672000 60861 4321 54749 513951;513952;513953;513954;513955;513956;513957;513958;513959;513960;513961;513962;513963;513964 407948;407949;407950;407951;407952;407953;407954;407955;407956;407957;407958 407952 8 YQDAPAAQFMAHK Unmodified 1476.682 0.68198369 2374 Q14145 KEAP1 Kelch-like ECH-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 6.57 3.96 3 4 1 1 1 1 1 1 1 52.013 49.522 3 0.00070788 62344 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 70.412 66.194 64573000 9630500 21621000 7444700 3026800 0 0 0 0 0 7670000 0 0 0 5561500 9618400 60862 2374 54750 513965;513966;513967;513968;513969;513970;513971 407959;407960;407961;407962;407963;407964;407965 407964 5 YQDAPAAQFMAHK Oxidation (M) 1492.6769 0.67689831 2374 Q14145 KEAP1 Kelch-like ECH-associated protein 1 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 39.735 34.65 3 0.014443 44052 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 46.069 35.144 12922000 7382400 0 5539200 0 0 0 0 0 0 0 0 0 0 0 0 60863 2374 54750 513972;513973 407966 407966 3860 0 YQDDNSLAHPNLFIEK Unmodified 1902.9112 0.91119158 3886 Q96IZ7 RSRC1 Serine/Arginine-related protein 53 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 71.85 71.977 3 0.0041501 82692 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 40.242 32.328 67390000 0 0 0 0 3231400 8314700 2559900 4545700 4643700 6432900 5576600 9465000 5116600 5982900 11520000 60864 3886 54751 513974;513975;513976;513977;513978;513979;513980;513981;513982;513983;513984 407967;407968;407969;407970;407971;407972;407973;407974;407975;407976 407975 10 YQDELTALLR Unmodified 1220.6401 0.6401021 3876 Q96IF1 AJUBA LIM domain-containing protein ajuba yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 81.464 81.623 2 0.042395 94573 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 39.305 28.083 30063000 0 0 0 0 0 0 1767300 3010800 0 0 3635300 4038100 2569100 3264700 11778000 60865 3876 54752 513985;513986;513987;513988;513989;513990;513991 407977 407977 1 YQDILVFR Unmodified 1052.5655 0.56548059 1093 P19623 SRM Spermidine synthase yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 77.204 77.352 2 0.0056067 88676 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 117.16 93.188 60233000 0 0 0 0 0 3065100 0 3037200 1785400 3736500 7750700 9593300 3056900 8367200 19841000 60866 1093 54753 513992;513993;513994;513995;513996;513997;513998;513999;514000 407978;407979;407980;407981;407982;407983;407984 407979 7 YQDTPGVK Unmodified 906.4447 0.44469675 1714 P53396 ACLY ATP-citrate synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 15.581 15.724 2 0.0043249 15075 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 111.82 86.258 9662100000 0 0 0 242570000 473780000 422760000 1892500000 2058500000 1690200000 526970000 882140000 1371300000 29622000 71693000 0 60867 1714 54754 514001;514002;514003;514004;514005;514006;514007;514008;514009;514010;514011 407985;407986;407987;407988;407989;407990;407991;407992;407993;407994;407995;407996;407997 407989 8 YQEAAPNVANNTGPHAASCFGAK Unmodified 2374.076 0.07604185 426 O60716 CTNND1 Catenin delta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 48.417 48.59 3 4.2143E-21 53754 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.475 81.981 83486000 0 0 0 4952900 6624300 0 9318000 5744800 0 0 9167300 9954200 14742000 8801200 14181000 60868 426 54755 514012;514013;514014;514015;514016;514017;514018;514019;514020;514021 407998;407999;408000;408001;408002;408003;408004;408005;408006 407999 9 YQEALDVIR Unmodified 1105.5768 0.57677356 2465 Q14CX7 NAA25 N-alpha-acetyltransferase 25, NatB auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 58.801 59.01 2 0.0026666 67290 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 138.1 111.5 1447000000 0 0 0 0 0 0 428140000 504240000 491030000 0 23603000 0 0 0 0 60869 2465 54756 514022;514023;514024;514025 408007;408008;408009;408010;408011;408012;408013 408007 7 YQEALDVIRGK Unmodified 1290.6932 0.6932003 2465 Q14CX7 NAA25 N-alpha-acetyltransferase 25, NatB auxiliary subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.33 3.77 3 6 1 2 2 2 2 53.469 51.783 2;3 0.00036923 57611 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 81.625 63.357 264930000 25950000 0 25661000 0 0 0 59404000 70152000 83766000 0 0 0 0 0 0 60870 2465 54757 514026;514027;514028;514029;514030;514031;514032;514033;514034 408014;408015;408016;408017;408018;408019;408020;408021;408022 408015 8 YQEDSDPERSDYEEQQLQK Unmodified 2386.0197 0.019691987 2939 Q6P6C2 ALKBH5 RNA demethylase ALKBH5 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 40.164 35.305 3 0.0028085 45931 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 42.059 38.943 12661000 0 12661000 0 0 0 0 0 0 0 0 0 0 0 0 0 60871 2939 54758 514035;514036 408023 408023 1 YQEEFEHFQQELDK Unmodified 1868.8217 0.82170787 1563 P49257 LMAN1 Protein ERGIC-53 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 68.502 68.58 3 0.00059722 78327 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 49.482 45.38 124480000 0 0 0 3357000 3219000 9628100 4627800 10458000 9068300 12281000 9693600 17572000 8392800 10149000 26033000 60872 1563 54759 514037;514038;514039;514040;514041;514042;514043;514044;514045;514046;514047;514048 408024;408025;408026;408027;408028;408029 408027 3 YQEELEDR Unmodified 1080.4724 0.47236807 4163 Q9BUK6 MSTO1 Protein misato homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 22.92 23.165 2 0.0068957 24541 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 91.853 7.2856 45815000 0 0 0 2320300 0 4436900 2974700 1984200 1792400 4403500 3946200 6619900 7425900 0 9911400 60873 4163 54760 514049;514050;514051;514052;514053;514054;514055;514056;514057;514058 408030;408031;408032;408033;408034;408035;408036;408037 408030 8 YQEELNFDNPLGMRGEIAK Unmodified 2223.063 0.063017547 5198 Q9Y4E8 USP15 Ubiquitin carboxyl-terminal hydrolase 15 yes yes 0 0 1 By MS/MS 2 0 1 1 86.053 81.279 3 0.00060166 101045 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 47.732 43.38 31351000 0 31351000 0 0 0 0 0 0 0 0 0 0 0 0 0 60874 5198 54761 514059 408038 408038 1 YQEELNFDNPLGMRGEIAK Oxidation (M) 2239.0579 0.05793217 5198 Q9Y4E8 USP15 Ubiquitin carboxyl-terminal hydrolase 15 yes yes 0 1 1 By MS/MS 2 0 1 1 78.72 76.092 3 0.00046894 92422 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 55.33 46.622 7504900 0 0 7504900 0 0 0 0 0 0 0 0 0 0 0 0 60875 5198 54761 514060 408039 408039 6594 1 YQEGGVESAFHK Unmodified 1350.6204 0.62042929 1407 P40121 CAPG Macrophage-capping protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.18 3.74 6 2 14 2 4 2 1 1 2 1 1 1 1 1 1 1 1 2 37.18 35.494 2;3 1.9549E-13 46732 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 155.06 139.18 3020900000 118950000 1639000000 661510000 7579200 3930500 163690000 13557000 6008400 6564800 21483000 19830000 23403000 13264000 18894000 303290000 60876 1407 54762 514061;514062;514063;514064;514065;514066;514067;514068;514069;514070;514071;514072;514073;514074;514075;514076;514077;514078;514079;514080;514081;514082 408040;408041;408042;408043;408044;408045;408046;408047;408048;408049;408050;408051;408052;408053;408054;408055;408056;408057;408058;408059;408060;408061 408045 11 YQEGVSAENPVENHINITQSDK Unmodified 2471.1565 0.15646024 2718 Q58WW2 DCAF6 DDB1- and CUL4-associated factor 6 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 8.85 2.71 1 1 11 2 1 1 1 1 1 1 1 1 1 1 1 61.357 60.625 3 1.2395E-49 73818 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 127.01 119.76 155730000 0 106050000 0 2411600 2025300 5387800 0 3718000 4198400 4148100 6924900 4265700 6265100 4528700 5808800 60877 2718 54763 514083;514084;514085;514086;514087;514088;514089;514090;514091;514092;514093;514094;514095 408062;408063;408064;408065;408066;408067;408068;408069;408070 408067 9 YQEIEEDR Unmodified 1080.4724 0.47236807 5178 Q9Y3X0 CCDC9 Coiled-coil domain-containing protein 9 yes yes 0 0 0 By MS/MS 10 0 1 1 23.654 23.343 2 0.01266 24770 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 74.127 0 1962700 0 0 0 0 1962700 0 0 0 0 0 0 0 0 0 0 60878 5178 54764 514096 408071 408071 1 YQELINDIAR Unmodified 1233.6354 0.63535107 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.463 65.55 2 1.1518E-16 75239 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 169.12 102.09 1177300000 0 0 0 88448000 76273000 105700000 88894000 68726000 72104000 114610000 127850000 138370000 68840000 73624000 153860000 60879 1518 54765 514097;514098;514099;514100;514101;514102;514103;514104;514105;514106;514107;514108 408072;408073;408074;408075;408076;408077;408078;408079;408080;408081;408082;408083;408084;408085;408086;408087;408088 408075 17 YQELMNVK Unmodified 1023.5059 0.5059168 99 Q6KB66;CON__Q6KB66-1 KRT80 Keratin, type II cytoskeletal 80 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 42.806 42.965 2 0.0064039 48883 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 120.49 83.468 + 124160000 0 0 0 31745000 5533600 0 6277400 19027000 4880400 9913800 0 16455000 15514000 8119800 6692500 60880 99 54766 514109;514110;514111;514112;514113;514114;514115;514116;514117;514118;514119 408089;408090;408091;408092;408093;408094;408095;408096;408097 408096 9 YQELMNVK Oxidation (M) 1039.5008 0.50083142 99 Q6KB66;CON__Q6KB66-1 KRT80 Keratin, type II cytoskeletal 80 yes no 0 1 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 26.775 26.937 2 0.023449 28327 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 52.403 25.149 + 10996000 0 0 0 0 2608900 0 0 0 0 0 0 8387000 0 0 0 60881 99 54766 514120;514121;514122 408098;408099 408098 2 YQELPNSGPPHDR Unmodified 1508.7008 0.70080487 1091 P19525 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 29.686 29.909 3 0.013136 31251 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 26.825 15.555 31835000 0 0 0 2281800 3876900 0 0 0 0 0 0 6614000 4724400 5840700 8497200 60882 1091 54767 514123;514124;514125;514126;514127;514128 408100;408101;408102;408103;408104 408100 5 YQELPNSGPPHDRR Unmodified 1664.8019 0.8019159 1091 P19525 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 23.919 24.357 3 0.00017198 24773 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 53.001 32.574 44862000 0 0 0 0 0 0 0 6351800 0 0 0 8708500 8509100 7364100 13928000 60883 1091 54768 514129;514130;514131;514132;514133;514134 408105;408106;408107;408108;408109;408110;408111 408106 7 YQELQITAGR Unmodified 1177.6091 0.60913632 103 CON__Q7Z794;Q7Z794 KRT77 Keratin, type II cytoskeletal 1b yes no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 2 2 1 1 2 1 1 49.18 49.224 2 0.0014272 55271 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 91.867 27.602 + 309030000 0 0 0 71439000 19354000 17211000 29555000 17728000 0 45835000 0 87658000 20256000 0 0 60884 103 54769 514135;514136;514137;514138;514139;514140;514141;514142;514143;514144;514145;514146 408112;408113;408114;408115;408116;408117;408118;408119;408120 408118 9 YQENAQLSVK Unmodified 1178.5932 0.5931519 3098 Q7Z4H7 HAUS6 HAUS augmin-like complex subunit 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 32.548 32.782 2 0.0045025 35750 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 72.607 51.982 57586000 0 0 0 0 0 6276700 5926100 5236900 7416800 9428000 0 8535600 9130100 5636100 0 60885 3098 54770 514147;514148;514149;514150;514151;514152;514153;514154 408121;408122;408123 408122 3 YQEQGGEASPQR Unmodified 1348.6008 0.60075648 4940 Q9UJU6 DBNL Drebrin-like protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.089 11.204 2 3.0567E-11 9259 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 150.08 145.56 69130000 0 0 0 2928000 1695400 4120500 6279600 3943400 2417700 6744000 0 11696000 6545400 8542200 14218000 60886 4940 54771 514155;514156;514157;514158;514159;514160;514161;514162;514163;514164;514165 408124;408125;408126;408127;408128;408129;408130;408131;408132 408127 9 YQEQHSVMCK Unmodified 1308.5591 0.55909136 1421 P40855 PEX19 Peroxisomal biogenesis factor 19 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 17.254 13.873 3 0.022831 17958 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 36.684 29.14 66855000 10150000 40284000 16421000 0 0 0 0 0 0 0 0 0 0 0 0 60887 1421 54772 514166;514167;514168 408133 408133 1 YQEQLVQEQELAK Unmodified 1604.8046 0.80460124 1463 P42695 NCAPD3 Condensin-2 complex subunit D3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 54.176 53.849 2 0.00017031 61067 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 97.452 81.254 162800000 0 94893000 0 0 0 7252900 6247400 5689100 4650500 10911000 8840800 8867400 0 7171700 8280200 60888 1463 54773 514169;514170;514171;514172;514173;514174;514175;514176;514177;514178 408134;408135;408136;408137;408138;408139;408140;408141;408142;408143;408144 408135 11 YQESLGNTVFELENR Unmodified 1797.8533 0.85334235 301 O43164 PJA2 E3 ubiquitin-protein ligase Praja-2 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 80.035 80.231 2 5.3563E-05 92477 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.417 89.314 8942400 0 0 0 0 0 0 0 0 0 0 0 3234600 0 0 5707800 60889 301 54774 514179;514180 408145 408145 1 YQESPGIQMK Unmodified 1179.5594 0.55940893 4902 Q9UHI6 DDX20 Probable ATP-dependent RNA helicase DDX20 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 37.138 37.371 2 0.0050791 40882 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 77.318 59.332 64075000 0 0 0 3625600 0 5720000 3928800 4095700 2414900 7305400 7081900 10270000 6612000 0 13021000 60890 4902 54775 514181;514182;514183;514184;514185;514186;514187;514188;514189;514190 408146;408147;408148 408148 3 YQESPGIQMK Oxidation (M) 1195.5543 0.55432356 4902 Q9UHI6 DDX20 Probable ATP-dependent RNA helicase DDX20 yes yes 0 1 0 By matching By matching By matching By MS/MS 10 0 4 1 1 1 1 22.328 22.299 2 0.023442 23016 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 41.429 16.535 9547400 0 0 0 1655400 1571700 2536800 0 0 0 0 0 0 3783500 0 0 60891 4902 54775 514191;514192;514193;514194 408149 408149 1 YQEVTNNLEFAK Unmodified 1454.7042 0.70415892 2407 Q14444 CAPRIN1 Caprin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.56 3 2 1 13 1 2 1 1 1 1 1 1 1 1 1 2 1 1 60.08 58.99 2 6.0755E-20 67228 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 161.17 142.39 3072700000 23270000 1283000000 0 140280000 128510000 111670000 130600000 107020000 114350000 161610000 177780000 203860000 131930000 144320000 214500000 60892 2407 54776 514195;514196;514197;514198;514199;514200;514201;514202;514203;514204;514205;514206;514207;514208;514209;514210 408150;408151;408152;408153;408154;408155;408156;408157;408158;408159;408160;408161;408162;408163;408164;408165;408166;408167;408168;408169;408170;408171;408172 408169 23 YQEYTNELQETLPQK Unmodified 1882.8949 0.89487281 4897 Q9UHD2 TBK1 Serine/threonine-protein kinase TBK1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.77 2.89 2 11 2 1 1 1 1 1 1 1 1 1 1 1 66.8 65.775 2;3 4.5816E-18 76044 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 108.37 91.741 108630000 0 70445000 0 2504600 3935100 0 3231700 4078300 2876000 6732900 4838600 5219800 0 4767000 0 60893 4897 54777 514211;514212;514213;514214;514215;514216;514217;514218;514219;514220;514221;514222;514223 408173;408174;408175;408176;408177;408178;408179;408180;408181;408182;408183 408182 11 YQFDAFYGER Unmodified 1294.5619 0.56185177 2449 Q14807 KIF22 Kinesin-like protein KIF22 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 71.729 71.843 2 0.010746 82416 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 55.461 51.01 40870000 0 0 0 0 2009600 3808600 3243900 4666400 2253800 5042500 0 5126200 3137600 3707400 7873900 60894 2449 54778 514224;514225;514226;514227;514228;514229;514230;514231;514232;514233 408184;408185;408186;408187;408188;408189;408190;408191;408192 408186 9 YQFDPNLGIR Unmodified 1221.6142 0.6142217 2828 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 9 1 1 1 1 1 1 1 1 1 74.426 74.463 2 0.0099821 85824 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 56.81 8.0545 94700000 0 0 0 5831100 6868400 10452000 7509800 0 4292800 13230000 8777100 14169000 0 0 23571000 60895 2828 54779 514234;514235;514236;514237;514238;514239;514240;514241;514242 408193;408194;408195;408196;408197;408198 408197 6 YQFLEEAFQNQK Unmodified 1543.7307 0.73070802 5052 Q9UPN9 TRIM33 E3 ubiquitin-protein ligase TRIM33 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 18 1 2 1 2 2 2 1 2 2 1 2 76.98 77.103 2 3.1031E-08 89271 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 158.76 0 102300000 0 0 0 0 4691500 9154900 3277900 7468300 10702000 10438000 4331200 0 6055800 12464000 33718000 60896 5052 54780 514243;514244;514245;514246;514247;514248;514249;514250;514251;514252;514253;514254;514255;514256;514257;514258;514259;514260 408199;408200;408201;408202;408203;408204;408205;408206;408207;408208;408209;408210;408211;408212;408213;408214;408215 408205 17 YQFSLSSTEK Unmodified 1188.5663 0.56626845 4757 Q9NZ08 ERAP1 Endoplasmic reticulum aminopeptidase 1 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 60.083 55.245 2 0.024424 71016 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.345 66.757 114500000 0 113210000 1290100 0 0 0 0 0 0 0 0 0 0 0 0 60897 4757 54781 514261;514262 408216 408216 1 YQGEHCLLK Unmodified 1146.5492 0.5491786 3952 Q96Q11 TRNT1 CCA tRNA nucleotidyltransferase 1, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 33.697 31.049 2 0.0075455 37580 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 101.46 64.759 33976000 18856000 0 0 0 0 0 0 0 0 0 0 15120000 0 0 0 60898 3952 54782 514263;514264 408217;408218 408217 2 YQGGFLISR Unmodified 1039.5451 0.5450795 1771 P55786 NPEPPS Puromycin-sensitive aminopeptidase yes yes 0 0 0 By MS/MS 10 0 1 1 59.814 60.4 2 0.032121 68156 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.371 8.0767 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60899 1771 54783 514265 408219 408219 1 YQGRDDEASNLVGEEK Unmodified 1808.8177 0.81768512 3319 Q8N392 ARHGAP18 Rho GTPase-activating protein 18 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 33.759 34.005 3 8.7811E-07 37202 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 69.935 64.879 81694000 0 0 0 0 3766700 7250000 6722500 0 4369700 8633900 19125000 11112000 8377600 5551500 6784700 60900 3319 54784 514266;514267;514268;514269;514270;514271;514272;514273;514274;514275 408220;408221;408222;408223;408224;408225;408226;408227;408228;408229;408230 408221 11 YQGTILSIDDNLQR Unmodified 1634.8264 0.82639932 2075 Q02413 DSG1 Desmoglein-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 76.648 76.581 2 0.00038724 88424 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 89.403 78.617 166210000 0 0 0 32872000 22997000 32520000 16445000 0 26131000 35245000 0 0 0 0 0 60901 2075 54785 514276;514277;514278;514279;514280;514281 408231;408232;408233;408234;408235;408236;408237;408238 408233 8 YQGVNLYIK Unmodified 1096.5917 0.59169534 2268 Q13310 PABPC4 Polyadenylate-binding protein 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 64.135 64.235 2 0.012661 74349 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 60.972 37.929 162280000 0 0 0 11030000 0 0 20476000 0 0 0 32312000 51508000 18087000 28869000 0 60902 2268 54786 514282;514283;514284;514285;514286;514287 408239;408240;408241 408241 3 YQGVNLYVK Unmodified 1082.576 0.57604528 958 P11940;Q4VXU2 PABPC1;PABPC1L Polyadenylate-binding protein 1;Polyadenylate-binding protein 1-like yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 55.846 55.972 2 0.0083126 63573 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 69.984 48.056 773870000 0 0 0 39594000 53143000 57531000 58231000 61966000 46117000 67287000 71066000 110090000 49247000 62938000 96658000 60903 958 54787 514288;514289;514290;514291;514292;514293;514294;514295;514296;514297;514298;514299 408242;408243;408244;408245;408246;408247;408248;408249;408250;408251 408242 2 YQHGLEFGK Unmodified 1077.5243 0.52434406 2465 Q14CX7 NAA25 N-alpha-acetyltransferase 25, NatB auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 33.268 33.383 2 0.0029212 36694 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 125.16 92.551 107190000 0 0 0 0 0 0 33451000 46067000 27677000 0 0 0 0 0 0 60904 2465 54788 514300;514301;514302 408252;408253;408254;408255 408253 4 YQIDPDACFSAK Unmodified 1413.6235 0.62346575 1129 P21796 VDAC1 Voltage-dependent anion-selective channel protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 62.899 62.248 2 0.00014972 77705 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 97.813 85.525 87145000 0 46264000 0 12625000 4252600 0 2723300 5091800 2410600 3052300 0 6254600 0 4470900 0 60905 1129 54789 514303;514304;514305;514306;514307;514308;514309;514310;514311 408256;408257;408258;408259 408257 4 YQIFSGTSK Unmodified 1029.5131 0.51311067 2264 Q13287 NMI N-myc-interactor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 49.777 43.927 2 0.011129 60326 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 109.71 97.507 54742000 33765000 19858000 1119200 0 0 0 0 0 0 0 0 0 0 0 0 60906 2264 54790 514312;514313;514314 408260;408261 408261 1 YQIHIPLPPK Unmodified 1204.6968 0.69682911 1369 P35998 PSMC2 26S protease regulatory subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.91 3.51 6 17 3 2 1 1 1 1 1 1 2 3 3 1 1 2 75.597 74.658 2;3 0.00097039 85839 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 91.584 77.377 352240000 70788000 27253000 7462800 8754400 12759000 23079000 1319500 0 10130000 37635000 38451000 56660000 8367500 10531000 39046000 60907 1369 54791 514315;514316;514317;514318;514319;514320;514321;514322;514323;514324;514325;514326;514327;514328;514329;514330;514331;514332;514333;514334;514335;514336;514337 408262;408263;408264;408265;408266;408267;408268;408269;408270;408271;408272;408273;408274;408275;408276;408277;408278;408279;408280;408281;408282;408283;408284;408285;408286;408287 408263 26 YQILPLHSQIPR Unmodified 1463.8249 0.82488317 2152 Q08211 DHX9 ATP-dependent RNA helicase A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.072 72.143 3 0.026025 83414 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 34.685 24.633 85627000 0 0 0 2811400 2738200 15173000 3720300 4860400 5682400 7057800 5741400 8984100 7704000 6864200 14290000 60908 2152 54792 514338;514339;514340;514341;514342;514343;514344;514345;514346;514347;514348;514349 408288;408289;408290 408290 3 YQINNISTVPK Unmodified 1275.6823 0.68230126 2136 Q07157 TJP1 Tight junction protein ZO-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 55.417 54.768 2 0.011865 62278 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 61.765 20.316 214670000 0 50782000 0 14300000 14401000 14915000 17235000 9985600 9662600 15726000 14239000 13408000 14448000 11067000 14505000 60909 2136 54793 514350;514351;514352;514353;514354;514355;514356;514357;514358;514359;514360;514361;514362;514363 408291;408292;408293;408294;408295;408296;408297;408298;408299 408291 8 YQIQEHQPK Unmodified 1169.5829 0.58292157 545 O75818 RPP40 Ribonuclease P protein subunit p40 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 21.414 18.072 3 0.0066853 23124 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 63.816 58.093 126210000 0 73773000 52434000 0 0 0 0 0 0 0 0 0 0 0 0 60910 545 54794 514364;514365 408300;408301 408301 2 YQLDPTASISAK Unmodified 1292.6612 0.66123147 1485 P45880 VDAC2 Voltage-dependent anion-selective channel protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 58.464 58.651 2 0.0058232 67184 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 57.785 35.045 62810000 0 0 0 0 5009100 3989800 5148100 10824000 3779500 6404700 5813700 6450000 5222600 4273600 5894400 60911 1485 54795 514366;514367;514368;514369;514370;514371;514372;514373;514374;514375;514376 408302;408303;408304 408304 3 YQLEIPENFTTR Unmodified 1509.7464 0.74635808 1694 P52701 MSH6 DNA mismatch repair protein Msh6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 80.566 80.627 2 3.0996E-08 92890 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 129.88 115.19 239620000 0 0 0 5426200 8019600 24424000 10225000 17064000 12045000 30048000 26482000 29820000 15860000 14824000 45381000 60912 1694 54796 514377;514378;514379;514380;514381;514382;514383;514384;514385;514386;514387;514388 408305;408306;408307;408308;408309;408310;408311;408312;408313;408314;408315;408316 408308 12 YQLLQLR Unmodified 932.54435 0.54435122 4226;2895 Q6N069;Q9BXJ9 NAA16;NAA15 N-alpha-acetyltransferase 16, NatA auxiliary subunit;N-alpha-acetyltransferase 15, NatA auxiliary subunit no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 69.175 69.42 2 0.024701 79435 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 82.263 60.716 20284000 0 0 0 0 0 0 0 1630900 0 2776600 6099700 9777100 0 0 0 60913 2895;4226 54797 514389;514390;514391;514392 408317;408318 408318 2 YQLLQLRPAQR Unmodified 1384.7939 0.7939174 4226 Q9BXJ9 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 1 1 2 2 2 2 2 2 2 1 1 2 62.539 62.695 2;3 4.2864E-15 71716 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 130.22 101.82 4139100000 0 0 0 7872700 4769100 26226000 196110000 388160000 341330000 494750000 643030000 1989300000 16271000 5609200 25740000 60914 4226 54798 514393;514394;514395;514396;514397;514398;514399;514400;514401;514402;514403;514404;514405;514406;514407;514408;514409;514410;514411;514412 408319;408320;408321;408322;408323;408324;408325;408326;408327;408328;408329;408330;408331;408332;408333;408334 408329 9 YQLLQLRPTQR Unmodified 1414.8045 0.80448208 2895 Q6N069 NAA16 N-alpha-acetyltransferase 16, NatA auxiliary subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 2 1 62.856 62.969 3 0.00075311 71791 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 74.944 67.22 666320000 0 0 0 17794000 13825000 48732000 44325000 63096000 68328000 85816000 81376000 239840000 0 0 3189900 60915 2895 54799 514413;514414;514415;514416;514417;514418;514419;514420;514421;514422;514423 408335;408336;408337;408338;408339;408340;408341;408342;408343;408344 408335 8 YQLNLPPYPDTECVYR Unmodified 2026.9459 0.94586252 3412 Q8NCW5 APOA1BP NAD(P)H-hydrate epimerase yes yes 0 0 0 By MS/MS 10 0 1 1 82.374 82.576 3 0.032617 95418 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 18.234 15.256 7592400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7592400 60916 3412 54800 514424 408345 408345 1 YQLNLPPYPDTECVYRLQ Unmodified 2268.0885 0.088504016 3412 Q8NCW5 APOA1BP NAD(P)H-hydrate epimerase yes yes 0 0 1 By MS/MS 2 0 2 2 91.351 86.441 2;3 5.442E-09 107185 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 122.46 113.46 61652000 0 61652000 0 0 0 0 0 0 0 0 0 0 0 0 0 60917 3412 54801 514425;514426 408346;408347 408347 2 YQLQSQEETK Unmodified 1252.5935 0.59354583 3432 Q8NEY1 NAV1 Neuron navigator 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.234 22.438 2 1.5175E-42 22487 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 189.13 157.2 189450000 0 0 0 8166400 9145700 16848000 9441100 10196000 13684000 18064000 21016000 29650000 22591000 15646000 14999000 60918 3432 54802 514427;514428;514429;514430;514431;514432;514433;514434;514435;514436;514437;514438 408348;408349;408350;408351;408352;408353;408354 408351 7 YQLYLSSLK Unmodified 1113.607 0.60701105 3713 Q969F9 HPS3 Hermansky-Pudlak syndrome 3 protein yes yes 0 0 0 By MS/MS 2 0 1 1 80.54 72.41 2 0.027564 95030 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 100.02 68.082 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60919 3713 54803 514439 408355 408355 1 YQMGDQNVYPGPIDNSGLLK Oxidation (M) 2224.047 0.047033132 5198 Q9Y4E8 USP15 Ubiquitin carboxyl-terminal hydrolase 15 yes yes 0 1 0 By MS/MS 2 0 1 1 80.137 75.425 2 3.6526E-29 93910 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.04 93.095 69018000 0 69018000 0 0 0 0 0 0 0 0 0 0 0 0 0 60920 5198 54804 514440 408356 408356 6595 1 YQMGDQNVYPGPIDNSGLLK Unmodified 2208.0521 0.05211851 5198 Q9Y4E8 USP15 Ubiquitin carboxyl-terminal hydrolase 15 yes yes 0 0 0 By MS/MS 2 0 1 1 84.532 79.789 3 3.86E-05 99112 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 42.705 33.047 153340000 0 153340000 0 0 0 0 0 0 0 0 0 0 0 0 0 60921 5198 54804 514441 408357 408357 1 YQNLIDVGFSK Unmodified 1282.6558 0.65575216 4943 Q9UJX2 CDC23 Cell division cycle protein 23 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 76.711 76.183 2 1.9258E-16 94366 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 166.34 138.12 272160000 0 126010000 0 4598300 7963100 11036000 6866200 11684000 7563900 15336000 12163000 14718000 11126000 14433000 28672000 60922 4943 54805 514442;514443;514444;514445;514446;514447;514448;514449;514450;514451;514452;514453;514454;514455 408358;408359;408360;408361;408362;408363;408364;408365;408366;408367;408368;408369;408370;408371;408372;408373 408361 16 YQNYIMEGVK Unmodified 1243.5907 0.59070906 5215 Q9Y508 RNF114 E3 ubiquitin-protein ligase RNF114 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 6.25 3.77 1 1 2 2 1 1 61.48 57.973 2 0.0034945 74410 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.15 90.951 211850000 0 200920000 0 0 0 0 0 0 0 10934000 0 0 0 0 0 60923 5215 54806 514456;514457;514458;514459 408374;408375;408376;408377;408378 408375 5 YQNYIMEGVK Oxidation (M) 1259.5856 0.58562368 5215 Q9Y508 RNF114 E3 ubiquitin-protein ligase RNF114 yes yes 0 1 0 By MS/MS By matching 2 0 2 1 1 47.028 42.321 2 0.0020673 55156 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 105.52 48.343 104800000 0 97234000 7571300 0 0 0 0 0 0 0 0 0 0 0 0 60924 5215 54806 514460;514461 408379 408379 6617 1 YQPLASTASDNDFVTPEPR Unmodified 2106.9858 0.98581308 2476 Q15021 NCAPD2 Condensin complex subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 24 2 2 2 2 2 2 2 2 2 2 2 2 72.119 72.188 2;3 5.147E-17 82453 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 104.17 99.089 255800000 0 0 0 9519400 12787000 25733000 18198000 16740000 13772000 30723000 23635000 28747000 14149000 22259000 39534000 60925 2476 54807 514462;514463;514464;514465;514466;514467;514468;514469;514470;514471;514472;514473;514474;514475;514476;514477;514478;514479;514480;514481;514482;514483;514484;514485 408380;408381;408382;408383;408384;408385;408386;408387;408388;408389;408390;408391;408392;408393;408394;408395 408384 16 YQPQTASELIGNELAIK Unmodified 1873.9785 0.97854286 3958 Q96QE3 ATAD5 ATPase family AAA domain-containing protein 5 yes yes 0 0 0 By MS/MS 2 0 1 1 87.573 82.765 2 0.00037812 102869 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 76.073 59.935 15804000 0 15804000 0 0 0 0 0 0 0 0 0 0 0 0 0 60926 3958 54808 514486 408396 408396 1 YQQAGLPLIVLAGK Unmodified 1469.8606 0.86059998 1126 P21399 ACO1 Cytoplasmic aconitate hydratase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 88.841 88.971 2 0.00059439 102920 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 85.355 74.393 29463000 0 0 0 0 0 1329600 0 0 0 0 4847100 3015100 0 0 20271000 60927 1126 54809 514487;514488;514489;514490 408397;408398;408399;408400 408397 4 YQQELEEEIK Unmodified 1307.6245 0.62451161 2869 Q6DD88 ATL3 Atlastin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 45.921 46.271 2 0.00024044 52210 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 124.92 108.29 109530000 0 0 0 0 0 0 0 18056000 0 16807000 23841000 0 17549000 14069000 19211000 60928 2869 54810 514491;514492;514493;514494;514495;514496;514497;514498;514499;514500;514501 408401;408402;408403;408404;408405;408406;408407;408408;408409;408410;408411 408401 11 YQQETSVSQLPGRPK Unmodified 1716.8795 0.87949752 4511 Q9HCD6 TANC2 Protein TANC2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 38.302 38.544 3 0.0011541 41910 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 37.177 26.838 83226000 0 0 0 0 5032200 6856600 8057600 4774900 5437900 5331100 10266000 12032000 6972400 7903300 10562000 60929 4511 54811 514502;514503;514504;514505;514506;514507;514508;514509;514510;514511;514512 408412;408413;408414;408415;408416;408417;408418 408415 7 YQQGDFGYCPR Unmodified 1389.5772 0.57718426 1956 P67870 CSNK2B Casein kinase II subunit beta yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 44.776 45.387 2 0.0076229 49914 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 64.711 60.551 16881000 0 0 0 0 0 0 0 0 0 0 0 6554200 4455300 0 5872000 60930 1956 54812 514513;514514;514515 408419;408420 408419 2 YQQLFEDIRGQSDIAITK Unmodified 2124.0851 0.085133198 1332 P33991 MCM4 DNA replication licensing factor MCM4 yes yes 0 0 1 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 83.649 75.519 3 7.4974E-05 98720 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.942 61.193 16588000 16588000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60931 1332 54813 514516;514517;514518 408421;408422;408423 408423 3 YQQNAEQYGGTR Unmodified 1413.6273 0.62730558 4254 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 18.467 18.711 2 0.047674 17981 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 44.425 21.105 4228700 0 0 0 0 0 0 839240 1153800 0 0 0 0 0 0 2235600 60932 4254 54814 514519;514520;514521 408424 408424 1 YQRDYEEMASR Unmodified 1446.6198 0.61977736 1253 P29590 PML Protein PML yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 27.068 27.38 3 0.0091746 29413 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 46.069 39.165 43882000 0 0 0 0 0 0 3331400 5130200 0 6693600 6086400 10129000 8065400 4446100 0 60933 1253 54815 514522;514523;514524;514525;514526;514527;514528 408425 408425 1 YQSAPSQAPGNTIER Unmodified 1617.7747 0.7746981 3201 Q86XZ4 SPATS2 Spermatogenesis-associated serine-rich protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 33.624 33.798 2 0.00036272 36934 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 72.652 65.993 48030000 0 0 0 0 3916700 5530900 5107100 4205900 3587800 6233900 8439400 0 0 5064300 5943900 60934 3201 54816 514529;514530;514531;514532;514533;514534;514535;514536;514537;514538 408426;408427;408428;408429;408430;408431;408432;408433 408428 8 YQSFNNQSDLEK Unmodified 1471.6579 0.657937 1582 P49642 PRIM1 DNA primase small subunit yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 37.851 35.712 2 0.0034705 39114 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.098 66.933 34551000 0 11108000 0 0 0 0 0 0 0 0 0 0 0 0 23444000 60935 1582 54817 514539;514540 408434;408435 408435 2 YQSHDYAFSSVEK Unmodified 1559.6892 0.68923713 4901 Q9UHG3 PCYOX1 Prenylcysteine oxidase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 40.753 40.931 3 0.0036135 46069 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 38.376 33.661 87490000 0 0 0 8965800 5830700 5882300 5011900 7763600 3690700 10658000 8803800 8048600 6054800 6552100 10227000 60936 4901 54818 514541;514542;514543;514544;514545;514546;514547;514548;514549;514550;514551;514552 408436;408437;408438;408439;408440;408441 408441 6 YQSSQGDIGVSQSR Unmodified 1510.7012 0.7011988 4511 Q9HCD6 TANC2 Protein TANC2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 26.518 26.719 2 1.6897E-05 28383 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 88.441 82.469 42659000 0 0 0 2158700 2359800 2918300 2729400 3423500 2800400 3629200 5153600 5733000 3841600 2866600 5045400 60937 4511 54819 514553;514554;514555;514556;514557;514558;514559;514560;514561;514562;514563;514564 408442;408443;408444;408445;408446;408447;408448;408449;408450;408451;408452;408453;408454 408448 13 YQSTLWDK Unmodified 1039.4975 0.4974606 4721 Q9NX74 DUS2 tRNA-dihydrouridine(20) synthase [NAD(P)+]-like yes yes 0 0 0 By MS/MS 2 0 1 1 50.19 44.484 2 0.022718 57917 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 83.206 51.917 49595000 0 49595000 0 0 0 0 0 0 0 0 0 0 0 0 0 60938 4721 54820 514565 408455;408456 408455 2 YQTDLYERER Unmodified 1371.6419 0.64189301 3537 Q8WUA2 PPIL4 Peptidyl-prolyl cis-trans isomerase-like 4 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 31.327 31.469 3 0.02966 33762 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 30.392 18.124 69936000 0 0 0 4387200 4504000 5109900 4453800 4581500 4480100 6364000 8315300 15477000 6173300 6090100 0 60939 3537 54821 514566;514567;514568;514569;514570;514571;514572;514573;514574;514575;514576 408457 408457 1 YQTEQSLR Unmodified 1023.4985 0.49852324 86 CON__Q14525;Q14525 KRT33B Keratin, type I cuticular Ha3-II no no 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 18.915 19.079 2 0.012173 19337 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 75.243 34.016 + 6366900 0 0 0 0 0 0 0 4087500 0 2279400 0 0 0 0 0 60940 86 54822 514577;514578 408458 408458 1 YQTLELEK Unmodified 1022.5284 0.52842638 1298 P31274;P09629;Q00444;P17509;P31268;P09630;P31273;P17481;P17482;P09067;P20719;P28356 HOXC9;HOXB7;HOXC5;HOXB6;HOXA7;HOXC6;HOXC8;HOXB8;HOXB9;HOXB5;HOXA5;HOXD9 Homeobox protein Hox-C9;Homeobox protein Hox-B7;Homeobox protein Hox-C5;Homeobox protein Hox-B6;Homeobox protein Hox-A7;Homeobox protein Hox-C6;Homeobox protein Hox-C8;Homeobox protein Hox-B8;Homeobox protein Hox-B9;Homeobox protein Hox-B5;Homeobox protein Hox-A5;Homeobox protein Hox-D9 no no 0 0 0 By MS/MS 2 0 1 1 50.021 44.315 2 0.045449 57510 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.383 31.289 21808000 0 21808000 0 0 0 0 0 0 0 0 0 0 0 0 0 60941 1298 54823 514579 408459 408459 1 YQTLSLK Unmodified 851.47527 0.4752686 5071 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By MS/MS By MS/MS By matching 7.76 3.47 3 2 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 43.352 41.86 2 0.031783 53806 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.029 16.079 537190000 107370000 212470000 10897000 7445000 12691000 17923000 11715000 10549000 10836000 23217000 20830000 22663000 17129000 18034000 33426000 60942 5071 54824 514580;514581;514582;514583;514584;514585;514586;514587;514588;514589;514590;514591;514592;514593;514594;514595;514596 408460;408461;408462 408460 3 YQTQPVTLGEVEQVQSGK Unmodified 1990.0007 0.0007348666 659 O95425 SVIL Supervillin yes yes 0 0 0 By matching By matching By matching By MS/MS By MS/MS 10 0 5 1 1 1 1 1 70.206 70.421 2 0.001104 81081 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 60.628 55.144 14725000 0 0 0 0 0 0 0 2741100 1335300 0 3500400 3591600 3556400 0 0 60943 659 54825 514597;514598;514599;514600;514601 408463 408463 1 YQVPCQTQTYVK Unmodified 1513.7235 0.72351415 2782 Q5T750 XP32 Skin-specific protein 32 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 48.936 48.787 2 0.00067768 55760 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 91.549 75.978 32879000 0 0 0 21614000 0 0 0 0 0 0 0 0 11266000 0 0 60944 2782 54826 514602;514603;514604 408464;408465;408466 408466 3 YQWGIMK Oxidation (M) 940.44767 0.44767364 4819 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 49.648 48.328 2 0.016827 54628 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 80.555 56.369 176960000 103980000 0 14157000 0 0 6488000 8902600 0 7208100 10085000 0 12530000 13616000 0 0 60945 4819 54827 514605;514606;514607;514608;514609;514610;514611;514612 408467;408468;408469 408468 6195 3 YQYAELGK Unmodified 970.476 0.47599688 3701;164 O00507;Q93008 USP9Y;USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-Y;Probable ubiquitin carboxyl-terminal hydrolase FAF-X no no 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 37.759 37.214 2 0.0079876 40739 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 87.754 63.08 414770000 0 299390000 0 5501400 6305500 12675000 5701600 7229700 5215100 13435000 9237900 11785000 12763000 11408000 14118000 60946 164;3701 54828 514613;514614;514615;514616;514617;514618;514619;514620;514621;514622;514623;514624;514625;514626 408470;408471;408472;408473;408474;408475;408476;408477;408478 408477 9 YQYAIDEYYR Unmodified 1382.6143 0.61428128 3305 Q8N128 FAM177A1 Protein FAM177A1 yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 64.762 64.829 2 0.010972 74224 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 55.064 47.259 27604000 0 0 0 1346000 1815600 0 2218300 0 0 3790000 4095900 4754000 4384900 0 5199600 60947 3305 54829 514627;514628;514629;514630;514631;514632;514633;514634 408479;408480 408480 2 YQYGGLNSGRPVTPPR Unmodified 1760.8958 0.89581629 1873 P62140 PPP1CB Serine/threonine-protein phosphatase PP1-beta catalytic subunit yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.22 48.381 3 4.7637E-28 53435 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 116.96 111.25 645090000 0 0 0 29394000 21331000 33546000 39401000 38610000 27835000 49161000 64781000 76705000 51470000 58701000 154150000 60948 1873 54830 514635;514636;514637;514638;514639;514640;514641;514642;514643;514644;514645;514646 408481;408482;408483;408484;408485;408486;408487;408488 408482 6 YQYGGLNSGRPVTPPRTANPPK Unmodified 2369.224 0.22402672 1873 P62140 PPP1CB Serine/threonine-protein phosphatase PP1-beta catalytic subunit yes yes 0 0 2 By MS/MS 2 0 1 1 56.919 48.739 4 0.0038842 66508 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 28.202 20.378 7818400 7818400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60949 1873 54831 514647 408489 408489 1 YRAPGVPRETEEEK Unmodified 1659.8216 0.82164829 1522 P47712 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase yes yes 0 0 2 By MS/MS By MS/MS 2 0 3 2 1 33.903 28.593 3;4 0.006512 40341 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.001 53.001 508040000 506770000 0 1275900 0 0 0 0 0 0 0 0 0 0 0 0 60950 1522 54832 514648;514649;514650 408490;408491 408491 1 YRAQLLEPSK Unmodified 1203.6612 0.66117189 1753 P55039 DRG2 Developmentally-regulated GTP-binding protein 2 yes yes 0 0 1 By MS/MS 2 0 1 1 45.271 38.279 3 4.471E-06 52666 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 112.36 94.884 206490000 206490000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60951 1753 54833 514651 408492;408493 408493 2 YRCELLYEGPPDDEAAMGIK Oxidation (M) 2342.0559 0.055883259 980 P13639 EEF2 Elongation factor 2 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.14 3.83 5 9 2 1 2 1 1 1 1 1 1 1 1 1 73.022 71.187 3 2.7253E-48 91089 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 133.09 120.49 2794000000 872310000 301640000 1322300000 4940000 0 14053000 0 14882000 8728600 14947000 39301000 41277000 0 35730000 123920000 60952 980 54834 514652;514653;514654;514655;514656;514657;514658;514659;514660;514661;514662;514663;514664;514665 408494;408495;408496;408497;408498;408499;408500;408501;408502;408503;408504;408505;408506;408507;408508;408509;408510;408511;408512 408501 1305 19 YRCELLYEGPPDDEAAMGIK Unmodified 2326.061 0.060968637 980 P13639 EEF2 Elongation factor 2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 5.23 3.79 6 2 5 3 3 2 1 1 1 1 1 79.472 76.634 2;3 1.2059E-24 88304 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 98.132 94.942 2167200000 885230000 465330000 739600000 0 0 0 0 1942200 0 0 5130100 3406700 0 5117700 61405000 60953 980 54834 514666;514667;514668;514669;514670;514671;514672;514673;514674;514675;514676;514677;514678 408513;408514;408515;408516;408517;408518;408519;408520;408521;408522;408523;408524;408525;408526 408515 13 YRDDGDEDYYK Unmodified 1437.5685 0.56845329 2097;913 Q03468;P0DP91 ERCC6 DNA excision repair protein ERCC-6 no no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 21.969 22.221 3 0.0089777 23219 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 46.643 37.131 101260000 0 0 0 8431300 0 8436000 8473900 4057900 7904500 10680000 9532400 12195000 12701000 8084300 10764000 60954 2097;913 54835 514679;514680;514681;514682;514683;514684;514685;514686;514687;514688;514689 408527;408528 408528 2 YRDHVTATQLIQK Unmodified 1571.842 0.8419898 1638 P50851 LRBA Lipopolysaccharide-responsive and beige-like anchor protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 38.244 38.647 3 0.013652 41477 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 31.656 24.772 22981000 0 0 0 0 0 4824900 0 0 0 3850900 0 5257400 3877400 0 5170700 60955 1638 54836 514690;514691;514692;514693;514694 408529 408529 1 YRDILEPQNER Unmodified 1431.7106 0.71064128 1638 P50851 LRBA Lipopolysaccharide-responsive and beige-like anchor protein yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 39.005 39.346 3 0.047051 42519 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 26.969 15.437 69135000 0 0 0 0 0 8577300 0 5083000 5282400 7968300 8823400 7590900 9027200 7874200 8908600 60956 1638 54837 514695;514696;514697;514698;514699;514700;514701;514702;514703 408530 408530 1 YRDVAECGPQQELDLNSPR Unmodified 2246.0386 0.038593711 4143 Q9BTE3 MCMBP Mini-chromosome maintenance complex-binding protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 58.422 58.609 3 4.3901E-17 65931 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 92.492 83.549 79171000 0 0 0 0 3361400 7266700 4416200 5160100 4814300 3695600 10684000 8850600 5956200 8330900 16634000 60957 4143 54838 514704;514705;514706;514707;514708;514709;514710;514711;514712;514713;514714 408531;408532;408533;408534;408535;408536;408537;408538;408539;408540;408541 408534 11 YRDVSPFDHSR Unmodified 1377.6426 0.64256171 1068 P18031 PTPN1 Tyrosine-protein phosphatase non-receptor type 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 31.436 31.52 3 0.018905 34071 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 39.581 24.95 85422000 0 0 0 8519700 8099500 6446000 12578000 9224400 8189300 6806300 10475000 0 7033700 8051200 0 60958 1068 54839 514715;514716;514717;514718;514719;514720;514721;514722;514723;514724 408542;408543 408543 2 YRESNTAGNDVFHK Unmodified 1636.7594 0.75938238 698 O95833 CLIC3 Chloride intracellular channel protein 3 yes yes 0 0 1 By MS/MS By matching By matching 10 0 3 1 1 1 22.888 22.883 3 0.027279 24260 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 30.543 17.747 8031300 0 0 0 3862700 0 1611700 0 2556900 0 0 0 0 0 0 0 60959 698 54840 514725;514726;514727 408544 408544 1 YRFLSNGHVTIPGQQDK Unmodified 1958.9963 0.99625861 1356 P35579 MYH9 Myosin-9 yes yes 0 0 1 By MS/MS By MS/MS By matching By MS/MS 10 0 6 2 1 1 2 62.106 62.353 3;4 2.1971E-10 70269 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 89.982 73.298 58292000 0 0 0 0 0 11587000 0 0 2962100 0 0 0 0 3116700 40626000 60960 1356 54841 514728;514729;514730;514731;514732;514733 408545;408546 408545 2 YRGDTSQAADDSASTTGSRK Unmodified 2072.9359 0.93590278 5107 Q9Y2K1 ZBTB1 Zinc finger and BTB domain-containing protein 1 yes yes 0 0 2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.47 2 1 14 1 1 2 2 1 1 2 2 1 2 8.7898 8.6573 3;4 7.6508E-27 7140 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 100.28 94.987 56428000 12010000 0 0 1725800 3377800 0 0 2622200 2248300 3382600 0 11131000 9973200 2811900 7145900 60961 5107 54842 514734;514735;514736;514737;514738;514739;514740;514741;514742;514743;514744;514745;514746;514747;514748 408547;408548;408549;408550;408551;408552;408553 408552 7 YRGFTIPEAFR Unmodified 1355.6986 0.69862003 140 O00299 CLIC1 Chloride intracellular channel protein 1 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 76.746 76.953 3 0.021372 88174 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 38.161 27.972 47809000 0 0 0 0 0 0 0 0 0 0 0 0 0 3867800 43941000 60962 140 54843 514749;514750 408554 408554 1 YRGMGSLDAMDK Oxidation (M) 1358.5959 0.59587079 964 P12268 IMPDH2 Inosine-5'-monophosphate dehydrogenase 2 yes yes 0 1 1 By MS/MS By MS/MS 2 0 8 5 3 34.319 29.13 2;3 0.00016155 43357 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 126.71 110.51 563240000 555430000 0 7818800 0 0 0 0 0 0 0 0 0 0 0 0 60963 964 54844 514751;514752;514753;514754;514755;514756;514757;514758 408555;408556;408557;408558;408559 408559 1259;1260 1 YRGMGSLDAMDK Unmodified 1342.601 0.60095617 964 P12268 IMPDH2 Inosine-5'-monophosphate dehydrogenase 2 yes yes 0 0 1 By MS/MS By MS/MS By matching 2 0 4 2 1 1 51.788 45.344 2;3 1.8987E-13 62488 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 155.33 134.81 415060000 398560000 14461000 2040000 0 0 0 0 0 0 0 0 0 0 0 0 60964 964 54844 514759;514760;514761;514762 408560;408561 408560 2 YRGMGSLDAMDK 2 Oxidation (M) 1374.5908 0.59078542 964 P12268 IMPDH2 Inosine-5'-monophosphate dehydrogenase 2 yes yes 0 2 1 By MS/MS 2 0 1 1 19.508 14.923 3 0.0091625 21701 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.463 46.947 59480000 59480000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60965 964 54844 514763 408562 408562 1259;1260 0 YRGMGSLDAMEK Oxidation (M) 1372.6115 0.61152086 1114 P20839 IMPDH1 Inosine-5'-monophosphate dehydrogenase 1 yes yes 0 1 1 By MS/MS 2 0 2 2 37.69 31.16 3 0.0034258 42736 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 66.708 50.57 80810000 80810000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60966 1114 54845 514764;514765 408563;408564 408563 1604;1605 2 YRGMGSLDAMEK 2 Oxidation (M) 1388.6064 0.60643548 1114 P20839 IMPDH1 Inosine-5'-monophosphate dehydrogenase 1 yes yes 0 2 1 By MS/MS By MS/MS 2 0 2 1 1 20.312 16.603 3 0.015858 23907 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.28 32.272 29452000 27250000 0 2202700 0 0 0 0 0 0 0 0 0 0 0 0 60967 1114 54845 514766;514767 408565 408565 1604;1605 0 YRHMQTFYR Unmodified 1300.6135 0.61351019 4954 Q9UK59 DBR1 Lariat debranching enzyme yes yes 0 0 1 By MS/MS 10 0 1 1 28.306 28.994 3 0.0034757 30287 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.643 56.011 11192000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11192000 60968 4954 54846 514768 408566 408566 1 YRHSDGNLCVK Unmodified 1347.6354 0.63536784 1576 P49458 SRP9 Signal recognition particle 9 kDa protein yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.27 2.3 1 10 1 1 1 1 1 1 1 1 1 1 1 14.231 14.013 3 0.00057684 21258 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 90.913 75.049 409560000 260470000 0 0 0 0 1687200 2946000 3602500 5050600 12985000 14646000 29393000 28574000 17976000 32220000 60969 1576 54847 514769;514770;514771;514772;514773;514774;514775;514776;514777;514778;514779 408567;408568;408569;408570;408571 408569 5 YRIQEQESSGEEDSDLSPEEREK Unmodified 2739.2107 0.21074023 1437 P41236;Q6NXS1 PPP1R2;PPP1R2P3 Protein phosphatase inhibitor 2;Protein phosphatase inhibitor 2-like protein 3 yes no 0 0 2 By MS/MS By MS/MS 2 0 4 2 2 43.392 38.125 3;4 1.0013E-19 52147 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 99.93 97.281 95699000 41954000 0 53744000 0 0 0 0 0 0 0 0 0 0 0 0 60970 1437 54848 514780;514781;514782;514783 408572;408573;408574;408575;408576;408577 408572 6 YRNPVSQCMR Unmodified 1309.602 0.60195923 2242 Q13148 TARDBP TAR DNA-binding protein 43 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 29.964 30.155 3 0.012569 32111 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 80.755 72.026 247990000 0 0 0 8298500 9219900 6948500 12292000 12691000 14084000 18576000 23317000 41314000 21877000 30893000 48476000 60971 2242 54849 514784;514785;514786;514787;514788;514789;514790;514791;514792;514793;514794;514795 408578;408579;408580;408581 408581 0 YRPEAPGPSVSLSPMPPSEVK Oxidation (M) 2240.1147 0.11471877 4210 Q9BWG6 SCNM1 Sodium channel modifier 1 yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 64.786 64.963 3 2.2361E-06 73967 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 61.942 53.441 32927000 0 0 0 0 0 6158400 7785900 0 7112400 0 0 11870000 0 0 0 60972 4210 54850 514796;514797;514798;514799 408582;408583;408584;408585;408586 408584 5689 5 YRPEAPGPSVSLSPMPPSEVK Unmodified 2224.1198 0.11980414 4210 Q9BWG6 SCNM1 Sodium channel modifier 1 yes yes 0 0 1 By matching By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 71.321 71.581 3 0.0076884 81894 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 28.418 20.331 18634000 0 0 0 0 0 0 0 2572600 0 4651500 0 3608400 0 0 7801100 60973 4210 54850 514800;514801;514802;514803 408587;408588 408588 2 YRPSMEGYR Oxidation (M) 1173.5237 0.52369213 426 O60716 CTNND1 Catenin delta-1 yes yes 0 1 1 By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 14.584 14.747 3 0.0099373 14507 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 48.794 30.354 25381000 0 0 0 1948900 0 3132800 1522600 0 4090500 3019000 2412400 0 5322400 0 3932900 60974 426 54851 514804;514805;514806;514807;514808;514809;514810;514811 408589 408589 543 1 YRQLEYNAR Unmodified 1211.6047 0.60471964 2346 Q13835 PKP1 Plakophilin-1 yes yes 0 0 1 By MS/MS 10 0 1 1 25.092 25.26 3 0.02405 26730 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 45.022 38.363 11338000 0 0 0 0 0 0 0 11338000 0 0 0 0 0 0 0 60975 2346 54852 514812 408590 408590 1 YRQQFEELYK Unmodified 1402.6881 0.68811492 2756 Q5SRE5 NUP188 Nucleoporin NUP188 homolog yes yes 0 0 1 By MS/MS 2 0 1 1 57.791 49.61 3 0.015305 67557 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.908 42.192 24795000 24795000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60976 2756 54853 514813 408591 408591 1 YRSDSQDEVEK Unmodified 1354.6001 0.60008777 2526 Q15390 MTFR1 Mitochondrial fission regulator 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 7.8255 7.9352 3 0.0086023 6355 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 38.402 20.594 36212000 0 0 0 1367900 2193700 1225000 2084900 2444900 2923300 4052000 0 4973400 4858500 5879400 4209200 60977 2526 54854 514814;514815;514816;514817;514818;514819;514820;514821;514822;514823;514824 408592;408593;408594;408595 408595 4 YRSEALPTDLPAPSAPDLTEPK Unmodified 2367.1958 0.19580586 996 P14314 PRKCSH Glucosidase 2 subunit beta yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.16 3.73 5 2 12 2 3 2 1 1 1 1 1 1 1 1 1 1 1 1 78.848 77.317 2;3 1.6454E-100 96442 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 169.67 142.64 1647500000 60672000 923060000 177360000 7934200 16690000 12575000 14891000 24495000 20397000 31194000 53321000 63621000 25888000 52501000 162930000 60978 996 54855 514825;514826;514827;514828;514829;514830;514831;514832;514833;514834;514835;514836;514837;514838;514839;514840;514841;514842;514843 408596;408597;408598;408599;408600;408601;408602;408603;408604;408605;408606;408607;408608;408609;408610;408611;408612;408613;408614;408615;408616;408617;408618;408619 408601 23 YRSLGDLEK Unmodified 1079.5611 0.56112349 1655 P51531 SMARCA2 Probable global transcription activator SNF2L2 yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 41.185 36.043 2 0.03644 49251 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.965 41.419 33326000 24793000 0 8532800 0 0 0 0 0 0 0 0 0 0 0 0 60979 1655 54856 514844;514845 408620 408620 0 YRTTSSANNPNLMYQDECDRR Unmodified 2590.1289 0.12888206 3670 Q92841 DDX17 Probable ATP-dependent RNA helicase DDX17 yes yes 0 0 2 By MS/MS 10 0 1 1 37.284 38.02 4 0.013585 41095 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 27.129 13.941 8975100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8975100 60980 3670 54857 514846 408621 408621 1 YRVLAIGDEK Unmodified 1162.6346 0.63462279 2189 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 46.424 46.592 3 0.004198 52395 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 65.719 43.078 74222000 0 0 0 4505600 3978200 5809300 4400100 5567300 0 8269600 8610600 10961000 7516600 4737000 9867100 60981 2189 54858 514847;514848;514849;514850;514851;514852;514853;514854;514855;514856;514857 408622;408623;408624;408625;408626;408627;408628 408623 7 YRVPDVLVADPPIAR Unmodified 1679.9359 0.93589019 2441 Q14697 GANAB Neutral alpha-glucosidase AB yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 79.524 79.628 3 0.00040838 91599 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 63.128 56.399 251550000 0 0 0 0 4889200 0 6859400 18247000 8785200 0 0 35192000 19167000 29861000 128550000 60982 2441 54859 514858;514859;514860;514861;514862;514863;514864;514865 408629;408630;408631 408629 3 YSAAPDSGGAPGVSPGQQQASGAAVGGSSAGETRGAPTPHEK Unmodified 3848.795 0.79499921 2180 Q10571 MN1 Probable tumor suppressor protein MN1 yes yes 0 0 1 By MS/MS 2 0 1 1 47.894 44.014 4 1.1104E-10 55462 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 44.099 42.353 8448000 0 0 8448000 0 0 0 0 0 0 0 0 0 0 0 0 60983 2180 54860 514866 408632;408633 408633 2 YSAEMPQLPQDLK Oxidation (M) 1534.7337 0.73374448 895 P09884 POLA1 DNA polymerase alpha catalytic subunit yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 8.65 2.93 2 1 14 3 2 2 1 2 1 1 2 1 1 1 62.21 61.225 2 6.833E-10 77201 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 115.41 103.78 141910000 0 87005000 0 6506000 5170100 4173200 6532500 0 3269500 4660800 10715000 0 3578500 3485000 6819700 60984 895 54861 514867;514868;514869;514870;514871;514872;514873;514874;514875;514876;514877;514878;514879;514880;514881;514882;514883 408634;408635;408636;408637;408638;408639;408640;408641;408642 408638 1158 9 YSAEMPQLPQDLK Unmodified 1518.7388 0.73882986 895 P09884 POLA1 DNA polymerase alpha catalytic subunit yes yes 0 0 0 By MS/MS 2 0 1 1 79.385 74.649 2 7.4064E-18 93056 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 141.89 132.2 605630000 0 605630000 0 0 0 0 0 0 0 0 0 0 0 0 0 60985 895 54861 514884 408643 408643 1 YSARALLEEVK Unmodified 1277.698 0.69795133 3813 Q96EK5 KIAA1279 KIF1-binding protein yes yes 0 0 1 By MS/MS 2 0 1 1 76.615 68.484 3 0.031725 90210 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 32.859 13.544 42549000 42549000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60986 3813 54862 514885 408644 408644 1 YSDADIEPFLK Unmodified 1296.6238 0.62378333 2361 Q14008 CKAP5 Cytoskeleton-associated protein 5 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 77.322 77.017 2 0.00025931 88476 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 91.584 76.917 280550000 0 111240000 0 5058100 8392600 14557000 9194700 10899000 11263000 16432000 18993000 20345000 13092000 14994000 26082000 60987 2361 54863 514886;514887;514888;514889;514890;514891;514892;514893;514894;514895;514896;514897;514898 408645;408646;408647;408648;408649;408650;408651;408652;408653;408654;408655;408656;408657;408658 408650 14 YSDDGNRETDEK Unmodified 1427.5801 0.58008061 4807 Q9P260 KIAA1468 LisH domain and HEAT repeat-containing protein KIAA1468 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 6.07 6.1761 3 0.031504 3925 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 30.729 24.031 19817000 0 0 0 1616000 1106000 1847200 2325900 1046700 994100 1270600 2609700 2084600 1938500 0 2978200 60988 4807 54864 514899;514900;514901;514902;514903;514904;514905;514906;514907;514908;514909 408659 408659 1 YSDDTPLPTPSYK Unmodified 1482.6878 0.68784015 3642 Q92620 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 yes yes 0 0 0 By MS/MS 2 0 1 1 63.261 57.368 2 0.016809 73861 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.655 50.335 94689000 0 94689000 0 0 0 0 0 0 0 0 0 0 0 0 0 60989 3642 54865 514910 408660 408660 1 YSDFEWLR Unmodified 1114.5084 0.50835964 404 O60493 SNX3 Sorting nexin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 78.53 78.68 2 0.0043249 90860 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 111.82 103.05 49136000 0 0 0 0 0 6465200 0 3159800 5017200 4500600 4205400 5654800 0 6005800 14128000 60990 404 54866 514911;514912;514913;514914;514915;514916;514917;514918 408661;408662;408663;408664;408665;408666;408667;408668 408661 8 YSDHAGPAIPSVVAYPK Unmodified 1770.8941 0.89408495 1216 P27448 MARK3 MAP/microtubule affinity-regulating kinase 3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.473 69.548 3 0.0042673 79870 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 22.32 16.157 43663000 0 0 0 2223900 1955700 3260400 3102700 2949000 3431800 4278700 3921700 5601600 3900400 2697100 6339600 60991 1216 54867 514919;514920;514921;514922;514923;514924;514925;514926;514927;514928;514929;514930 408669;408670;408671;408672;408673;408674;408675 408669 7 YSDIDIILLK Unmodified 1191.6751 0.67509062 3692 Q92973 TNPO1 Transportin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 87.484 86.669 2 0.0019304 100251 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 116.05 98.82 314160000 131460000 41260000 0 4349500 5751300 17078000 7514900 6609900 11425000 18683000 9808700 14118000 7486500 14426000 24199000 60992 3692 54868 514931;514932;514933;514934;514935;514936;514937;514938;514939;514940;514941;514942;514943;514944;514945 408676;408677;408678;408679;408680;408681;408682;408683;408684;408685;408686;408687;408688;408689;408690;408691;408692 408683 17 YSDLLSQSLNQPLTSSK Unmodified 1879.9527 0.95272204 3006 Q6ZRS2 SRCAP Helicase SRCAP yes yes 0 0 0 By matching By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 77.582 77.572 2 0.0030195 89654 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 62.162 43.352 12278000 0 0 0 2088100 0 0 2372000 0 2051000 5766800 0 0 0 0 0 60993 3006 54869 514946;514947;514948;514949 408693 408693 1 YSDLQNLAK Unmodified 1050.5346 0.53457439 4233 Q9BXS6 NUSAP1 Nucleolar and spindle-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.56 1 1 13 2 1 1 2 1 1 1 1 1 1 1 1 1 43.611 43.015 2 0.00036912 55154 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 126.28 82.161 280230000 0 128230000 0 10878000 10941000 5217700 13844000 12022000 8844500 11093000 18042000 19132000 14951000 9630200 17398000 60994 4233 54870 514950;514951;514952;514953;514954;514955;514956;514957;514958;514959;514960;514961;514962;514963;514964 408694;408695;408696;408697;408698;408699;408700;408701;408702;408703;408704;408705;408706;408707;408708 408698 14 YSDLTTLVAFPSSSVYPTK Unmodified 2075.0463 0.046288076 1183 P25205 MCM3 DNA replication licensing factor MCM3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 2 1 1 88.991 89.124 2 6.4184E-24 103150 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 101.36 93.813 72296000 0 0 0 0 0 4679300 1467500 0 2774900 10256000 9217600 7325900 1454900 5622700 29497000 60995 1183 54871 514965;514966;514967;514968;514969;514970;514971;514972;514973;514974;514975 408709;408710;408711;408712;408713;408714;408715;408716;408717;408718 408712 10 YSDPGPVYDCLVWHDGEVWRACIDSNEDGDLSK Unmodified 3853.6625 0.66245339 1243 P29144 TPP2 Tripeptidyl-peptidase 2 yes yes 0 0 1 By MS/MS 2 0 1 1 93.318 85.188 4 0.023916 110416 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 19.636 17.687 9655900 9655900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60996 1243 54872 514976 408719 408719 1 YSDSLVQK Unmodified 938.47091 0.4709115 1694 P52701 MSH6 DNA mismatch repair protein Msh6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 25.938 26.096 2 0.033366 28217 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 53.754 32.073 309840000 0 0 0 17470000 23193000 31480000 29817000 28255000 0 37351000 33971000 0 36494000 27959000 43852000 60997 1694 54873 514977;514978;514979;514980;514981;514982;514983;514984;514985;514986 408720;408721;408722 408721 3 YSDTIAELQELQPSAK Unmodified 1791.8891 0.88905915 189 O14578 CIT Citron Rho-interacting kinase yes yes 0 0 0 By MS/MS 2 0 2 2 82.172 77.467 2;3 0.00018778 96326 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 120.53 103.61 92813000 0 92813000 0 0 0 0 0 0 0 0 0 0 0 0 0 60998 189 54874 514987;514988 408723;408724 408723 2 YSDVSGLLANYTDPQSK Unmodified 1856.8792 0.87922275 2952 Q6PI98 INO80C INO80 complex subunit C yes yes 0 0 0 By MS/MS 2 0 1 1 83.421 78.701 2 0.0069361 97888 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.879 58.678 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60999 2952 54875 514989 408725 408725 1 YSEEANNLIEECEQAER Unmodified 2082.88 0.88002738 3866 Q96HE7 ERO1L ERO1-like protein alpha yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 62.026 62.308 2 0.00014728 70569 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.552 82.32 10492000 0 0 0 0 0 2488000 0 0 0 0 0 0 0 0 8003700 61000 3866 54876 514990;514991 408726 408726 1 YSEEANNLIEECEQAERLGAVDESLSEETQK Unmodified 3569.5951 0.59514492 3866 Q96HE7 ERO1L ERO1-like protein alpha yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 85.6 80.313 3 1.2688E-196 102392 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 188.97 187.19 22802000 13220000 0 9582100 0 0 0 0 0 0 0 0 0 0 0 0 61001 3866 54877 514992;514993 408727;408728 408727 2 YSEEVLAVFK Unmodified 1183.6125 0.61249036 3839 Q96FV9 THOC1 THO complex subunit 1 yes yes 0 0 0 By MS/MS By matching By matching By MS/MS By MS/MS By matching By matching By matching By matching 9.11 2.51 1 8 1 1 1 1 1 1 1 1 1 79.223 79.358 2 0.038556 91306 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 40.502 11.029 73435000 0 0 0 0 0 6655500 5668700 0 6517900 11548000 8955400 0 10559000 8991500 14539000 61002 3839 54878 514994;514995;514996;514997;514998;514999;515000;515001;515002 408729;408730;408731 408729 3 YSEFFTGSK Unmodified 1064.4815 0.48147619 4110 Q9BRK5 SDF4 45 kDa calcium-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.57 3.85 3 1 3 1 2 1 1 1 1 51.812 48.733 2 0.00053306 63130 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 135.83 80.154 169250000 8055900 103320000 5878900 0 0 0 0 0 0 16074000 0 0 14654000 0 21266000 61003 4110 54879 515003;515004;515005;515006;515007;515008;515009 408732;408733;408734;408735;408736;408737;408738 408733 7 YSEGEIR Unmodified 852.39775 0.39774656 5235 Q9Y5K5 UCHL5 Ubiquitin carboxyl-terminal hydrolase isozyme L5 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 17.673 17.881 2 0.030762 17510 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 74.439 54.592 63384000 0 0 0 4289900 4151800 0 3412900 4291000 2962800 6425300 6706000 9118900 5238600 5490800 11296000 61004 5235 54880 515010;515011;515012;515013;515014;515015;515016;515017;515018;515019;515020 408739;408740;408741 408740 3 YSEGYPGQR Unmodified 1055.4672 0.46722311 1335 P34896 SHMT1 Serine hydroxymethyltransferase, cytosolic yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 20.658 20.97 2 0.0063754 21395 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 75.243 42.634 50065000 0 0 0 0 1916500 0 0 1960000 0 2903300 10456000 10975000 0 5150600 16703000 61005 1335 54881 515021;515022;515023;515024;515025;515026;515027 408742;408743;408744;408745;408746 408746 5 YSEIEEFYQK Unmodified 1334.603 0.60304789 2709 Q53T59 HS1BP3 HCLS1-binding protein 3 yes yes 0 0 0 By MS/MS 2 0 1 1 67.361 61.445 2 0.0021147 78450 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.57 95.047 20013000 0 20013000 0 0 0 0 0 0 0 0 0 0 0 0 0 61006 2709 54882 515028 408747 408747 1 YSELGHPFGYLK Unmodified 1409.698 0.69795133 4982 Q9UL03 INTS6 Integrator complex subunit 6 yes yes 0 0 0 By MS/MS 2 0 1 1 77.67 69.539 3 0.011166 91539 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 48.188 39.788 6143800 6143800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 61007 4982 54883 515029 408748;408749 408749 2 YSELGVNEGNK Unmodified 1208.5673 0.56733108 5355 yes yes 0 0 0 By MS/MS 10 0 1 1 13.691 13.555 2 0.030888 12939 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 53.968 38.121 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 61008 5355 54884 515030 408750 408750 1 YSELTTVQQQLIR Unmodified 1577.8413 0.8413211 344 O43592 XPOT Exportin-T yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 75.692 75.683 2 0.0064918 86434 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 47.228 26.924 57804000 0 0 0 1738500 2567500 0 4302700 0 0 10458000 0 0 5356700 8664600 24716000 61009 344 54885 515031;515032;515033;515034;515035;515036;515037 408751;408752 408752 2 YSEMSEEK Unmodified 1001.4012 0.40117696 244 O15042 U2SURP U2 snRNP-associated SURP motif-containing protein yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 11.694 11.868 2 0.0074056 10426 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 89.752 71.022 39757000 0 0 0 0 2960600 2980400 3597600 3392700 2792700 2703100 3177700 6537300 3225000 3191400 5197900 61010 244 54886 515038;515039;515040;515041;515042;515043;515044;515045;515046;515047;515048 408753;408754;408755;408756;408757;408758;408759 408759 7 YSEMSEEK Oxidation (M) 1017.3961 0.39609158 244 O15042 U2SURP U2 snRNP-associated SURP motif-containing protein yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 6.2033 6.3708 2 0.016662 3583 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.815 57.839 25858000 0 0 0 0 0 2114700 2499400 1860500 1795700 2458100 3030200 3706600 3265600 2363700 2763800 61011 244 54886 515049;515050;515051;515052;515053;515054;515055;515056;515057;515058 408760;408761;408762 408760 334 3 YSEPLEEHGNFLITVPGGSDGPSGVLICSENYITYK Unmodified 3941.867 0.86695009 2528 Q15393 SF3B3 Splicing factor 3B subunit 3 yes yes 0 0 0 By MS/MS 2 0 1 1 97.116 88.985 3 7.6514E-05 115080 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 34.277 26.212 50808000 50808000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 61012 2528 54887 515059 408763 408763 1 YSEQTEFGITSDK Unmodified 1503.6729 0.67291837 227 O14920 IKBKB Inhibitor of nuclear factor kappa-B kinase subunit beta yes yes 0 0 0 By MS/MS 2 0 1 1 55.186 49.372 2 0.0041615 63729 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 79.286 54.149 101830000 0 101830000 0 0 0 0 0 0 0 0 0 0 0 0 0 61013 227 54888 515060 408764 408764 0 YSESLLCSNLESATYSNR Unmodified 2092.9371 0.93714833 2577 Q15785 TOMM34 Mitochondrial import receptor subunit TOM34 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.551 75.61 2 1.4882E-42 86842 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 186.13 164.37 87725000 0 0 0 1816100 5481100 4930700 3775400 5505000 4409500 7609400 8494000 11871000 6051900 9602000 18179000 61014 2577 54889 515061;515062;515063;515064;515065;515066;515067;515068;515069;515070;515071;515072 408765;408766;408767;408768;408769;408770;408771;408772;408773;408774;408775;408776 408768 12 YSEVFEAINITNNEK Unmodified 1769.8472 0.84719434 1964 P68400;Q8NEV1 CSNK2A1;CSNK2A3 Casein kinase II subunit alpha;Casein kinase II subunit alpha 3 yes no 0 0 0 By MS/MS By MS/MS By MS/MS 4.25 3.34 2 1 1 2 1 1 81.922 79.359 2 1.1072E-58 98467 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 216.06 212.63 180740000 0 168790000 5650700 0 0 0 0 0 0 0 0 0 0 0 6295800 61015 1964 54890 515073;515074;515075;515076 408777;408778;408779;408780 408777 4 YSEVFEAINITNNERVVVK Unmodified 2223.1535 0.15354711 1094 P19784 CSNK2A2 Casein kinase II subunit alpha' yes yes 0 0 1 By MS/MS 3 0 1 1 85.708 82.097 3 0.00012453 83331 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 57.499 53.951 2608000 2608000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 61016 1094 54891 515077 408781 408781 0 YSFHPVEDFPAPEEYK Unmodified 1953.8785 0.87849447 3528 Q8TF74 WIPF2 WAS/WASL-interacting protein family member 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 80.769 75.416 3 0.0011234 93276 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 49.595 44.13 16729000 8588800 0 8140300 0 0 0 0 0 0 0 0 0 0 0 0 61017 3528 54892 515078;515079 408782;408783;408784;408785 408784 4 YSFLQFDPAPR Unmodified 1339.6561 0.65608651 1954;1906 P67775;P62714 PPP2CA;PPP2CB Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform;Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 83.773 83.837 2 0.00028163 97027 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 105.4 94.177 260050000 0 0 0 7176500 10504000 19946000 9924600 11691000 12183000 21787000 27619000 42024000 11222000 18904000 67072000 61018 1954;1906 54893 515080;515081;515082;515083;515084;515085;515086;515087;515088;515089;515090;515091 408786;408787;408788;408789;408790;408791;408792;408793;408794;408795;408796;408797;408798 408786 13 YSFMATVTK Unmodified 1046.5107 0.51066783 377 O43865 AHCYL1 Putative adenosylhomocysteinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61.922 60.808 2 0.0052791 69186 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 78.149 63.992 411700000 205700000 91453000 15498000 4957600 4636200 7252100 5578700 9500100 4150800 6611900 13469000 12317000 6534100 7844200 16201000 61019 377 54894 515092;515093;515094;515095;515096;515097;515098;515099;515100;515101;515102;515103;515104;515105;515106 408799;408800;408801;408802;408803;408804;408805;408806;408807;408808;408809;408810 408801 11 YSFMATVTK Oxidation (M) 1062.5056 0.50558245 377 O43865 AHCYL1 Putative adenosylhomocysteinase 2 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 50.349 44.461 2 0.008101 58384 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 87.639 67.936 104580000 48340000 44829000 11406000 0 0 0 0 0 0 0 0 0 0 0 0 61020 377 54894 515107;515108;515109 408811;408812 408812 484 2 YSFYSTCSGQK Unmodified 1326.5551 0.55505184 2346 Q13835 PKP1 Plakophilin-1 yes yes 0 0 0 By MS/MS 10 0 1 1 41.803 41.287 2 0.00013158 46587 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 109.66 106.09 6636200 0 0 0 6636200 0 0 0 0 0 0 0 0 0 0 0 61021 2346 54895 515110 408813 408813 1 YSGGNYRDNYDN Unmodified 1436.5593 0.55928559 2026 P98179 RBM3 RNA-binding protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.574 21.784 2 5.3898E-42 21747 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 182.46 180.05 149080000 0 0 0 8033500 6277500 6728900 9687700 0 8802200 11872000 17392000 30817000 11081000 10906000 27480000 61022 2026 54896 515111;515112;515113;515114;515115;515116;515117;515118;515119;515120;515121;515122 408814;408815;408816;408817;408818;408819;408820;408821;408822;408823;408824;408825 408817 12 YSGLIVNK Unmodified 892.50182 0.5018177 3136 Q86TI2 DPP9 Dipeptidyl peptidase 9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 43.747 38.454 2 0.010724 52722 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 111.65 79.693 525290000 287020000 212090000 26173000 0 0 0 0 0 0 0 0 0 0 0 0 61023 3136 54897 515123;515124;515125 408826;408827 408826 2 YSGLTASSK Unmodified 912.45526 0.45526144 3740 Q96AT1 KIAA1143 Uncharacterized protein KIAA1143 yes yes 0 0 0 By MS/MS By MS/MS By matching 2 0 3 1 1 1 17.786 15.728 2 0.0076577 20546 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 99.136 83.503 177810000 544100 175640000 1626900 0 0 0 0 0 0 0 0 0 0 0 0 61024 3740 54898 515126;515127;515128 408828;408829 408828 2 YSGPEDDAAISLAFSK Unmodified 1669.7835 0.78353145 946 P11388 TOP2A DNA topoisomerase 2-alpha yes yes 0 0 0 By MS/MS 2 0 1 1 83.624 78.903 2 4.378E-16 98103 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.07 101.68 47617000 0 47617000 0 0 0 0 0 0 0 0 0 0 0 0 0 61025 946 54899 515129 408830 408830 1 YSGSDSDSISEGK Unmodified 1330.5525 0.55246888 199 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 16.52 16.735 2 0.0010666 16344 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 65.5 61.929 20675000 0 0 0 1341100 0 1885800 1143500 831960 898850 1659500 2165700 3522600 1978100 2037700 3209800 61026 199 54900 515130;515131;515132;515133;515134;515135;515136;515137;515138;515139;515140 408831;408832;408833;408834;408835;408836;408837 408836 7 YSGSEGSTQTLTK Unmodified 1357.6361 0.63613893 1197 P25815 S100P Protein S100-P yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 20.513 20.716 2 3.8625E-20 20959 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 185.77 163.68 406740000 0 0 0 34927000 14346000 12596000 14926000 18181000 9149900 15755000 47336000 44825000 20490000 51530000 122680000 61027 1197 54901 515141;515142;515143;515144;515145;515146;515147;515148;515149;515150;515151;515152 408838;408839;408840;408841;408842;408843;408844;408845;408846;408847;408848;408849 408843 12 YSGSTYLSDPR Unmodified 1244.5673 0.56733108 1738 P54277 PMS1 PMS1 protein homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 40.418 40.588 2 0.0022314 45173 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 68.657 54.45 43145000 0 0 0 3601200 3054300 3582900 4366000 2782900 2794800 4158600 4986500 4721100 4370300 0 4726400 61028 1738 54902 515153;515154;515155;515156;515157;515158;515159;515160;515161;515162;515163 408850;408851;408852;408853;408854;408855;408856;408857;408858;408859 408857 10 YSGSYNDYLR Unmodified 1236.5411 0.54111633 3948 Q96PK6 RBM14 RNA-binding protein 14 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 5 1 1 1 1 1 49.708 49.827 2 0.0090005 56829 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 66.435 53.168 30223000 0 0 0 0 4059900 0 10886000 0 0 0 0 0 0 2723500 12553000 61029 3948 54903 515164;515165;515166;515167;515168 408860;408861;408862;408863;408864 408864 5 YSGTLNLDR Unmodified 1037.5142 0.5141733 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.683 41.859 2 0.0036114 46292 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 109.71 73.834 1212600000 0 0 0 38277000 41024000 168820000 62576000 55741000 38722000 114830000 132540000 147420000 97084000 119090000 196430000 61030 1565 54904 515169;515170;515171;515172;515173;515174;515175;515176;515177;515178;515179;515180 408865;408866;408867;408868;408869;408870;408871;408872;408873;408874;408875;408876;408877;408878;408879 408876 15 YSGTLNLDRVTR Unmodified 1393.7314 0.73137672 1565 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 48.397 48.558 3 0.017513 54863 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 37.968 21.831 1075700000 0 0 0 53677000 49971000 86644000 70113000 65737000 70272000 80568000 114680000 136750000 89473000 84843000 172950000 61031 1565 54905 515181;515182;515183;515184;515185;515186;515187;515188;515189;515190;515191;515192 408880;408881;408882 408881 3 YSHEVLSEENFK Unmodified 1480.6834 0.68342347 3073 Q7Z2W4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 44.018 44.561 3 0.0074371 50181 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 45.004 35.358 23956000 0 0 0 0 0 0 0 0 0 0 0 0 11972000 0 11984000 61032 3073 54906 515193;515194 408883 408883 1 YSHLIGK Unmodified 816.44939 0.4493882 491 O75391 SPAG7 Sperm-associated antigen 7 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 23.337 19.365 2 0.027743 27543 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 135.87 70.602 199040000 196290000 0 2751100 0 0 0 0 0 0 0 0 0 0 0 0 61033 491 54907 515195;515196 408884 408884 0 YSHLQPGDHLTDITLK Unmodified 1836.937 0.9370124 2485 Q15046 KARS Lysine--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 3.2 2.32 5 4 1 5 3 1 1 70.459 65.192 2;3;4 2.5479E-30 79130 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 144.05 123.96 950580000 560630000 361380000 6137600 0 0 0 0 0 0 0 0 0 0 0 22427000 61034 2485 54908 515197;515198;515199;515200;515201;515202;515203;515204;515205;515206 408885;408886;408887;408888;408889;408890;408891;408892;408893 408888 7 YSHPGETDGTR Unmodified 1218.5265 0.5265289 4969 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS By MS/MS 10 0 20 2 2 2 2 2 1 2 1 2 1 1 2 7.5411 7.648 2;3 0.028876 4614 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 47.198 34.571 69713000 0 0 0 2868900 2943300 5673700 5194800 5630500 1314600 9708000 12513000 9753900 2018300 2034100 10060000 61035 4969 54909 515207;515208;515209;515210;515211;515212;515213;515214;515215;515216;515217;515218;515219;515220;515221;515222;515223;515224;515225;515226 408894;408895 408895 2 YSHVDLVVMVDGFEGEK Unmodified 1922.9084 0.90841439 1580 P49591 SARS Serine--tRNA ligase, cytoplasmic yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 90.744 84.902 3 4.4651E-19 108919 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 84.403 80.982 71737000 71737000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 61036 1580 54910 515227;515228 408896;408897;408898 408898 3 YSHVILGDK Unmodified 1030.5447 0.54474515 3241 Q8IWI9 MGA MAX gene-associated protein yes yes 0 0 0 By MS/MS 2 0 1 1 37.747 31.25 2 0.025059 43542 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 70.816 30.713 10219000 10219000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 61037 3241 54911 515229 408899 408899 1 YSHVQEVQER Unmodified 1273.6051 0.60511357 3701;164 O00507;Q93008 USP9Y;USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-Y;Probable ubiquitin carboxyl-terminal hydrolase FAF-X no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 1 2 2 2 2 14.14 14.287 2;3 0.00016479 13570 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 130.01 114.63 265760000 0 0 0 10337000 13532000 25313000 10288000 12241000 7858000 36473000 19967000 32022000 23269000 23378000 51081000 61038 164;3701 54912 515230;515231;515232;515233;515234;515235;515236;515237;515238;515239;515240;515241;515242;515243;515244;515245;515246;515247;515248;515249;515250;515251;515252 408900;408901;408902;408903;408904;408905;408906;408907;408908;408909;408910;408911;408912;408913;408914;408915 408902 15 YSIDQEFLK Unmodified 1141.5655 0.56554017 4252 Q9BYT8 NLN Neurolysin, mitochondrial yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 71.168 71.512 2 0.011616 81656 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.546 54.856 9531500 0 0 0 0 0 0 0 0 0 0 2238500 0 0 0 7293100 61039 4252 54913 515253;515254 408916 408916 1 YSIFTEK Unmodified 886.44363 0.44363412 5207 Q9Y4P1 ATG4B Cysteine protease ATG4B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 56.279 50.304 2 0.038085 65343 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 82.305 37.774 89450000 17568000 65258000 6624400 0 0 0 0 0 0 0 0 0 0 0 0 61040 5207 54914 515255;515256;515257 408917 408917 1 YSILQQTPR Unmodified 1104.5928 0.59275797 2417 Q14574 DSC3 Desmocollin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 50.86 50.95 2 3.0273E-28 58367 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 178.99 162.79 196320000 0 0 0 49788000 16087000 15061000 0 44319000 0 0 17185000 20953000 17702000 15221000 0 61041 2417 54915 515258;515259;515260;515261;515262;515263;515264;515265;515266;515267 408918;408919;408920;408921;408922;408923;408924;408925;408926;408927;408928;408929 408927 12 YSISLSPPEQQK Unmodified 1375.6983 0.69834526 2491 Q15057 ACAP2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 66.581 60.663 2 0.0007861 77372 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.01 79.009 46942000 0 46942000 0 0 0 0 0 0 0 0 0 0 0 0 0 61042 2491 54916 515268 408930;408931 408930 2 YSIWCSTEHGNK Unmodified 1480.6405 0.6405128 3120;4251 Q7Z739;Q9BYJ9 YTHDF3;YTHDF1 YTH domain-containing family protein 3;YTH domain-containing family protein 1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43.314 42.619 3 0.009069 60426 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.712 42.013 211250000 64525000 0 6771300 4575000 5451700 6080200 8171200 14774000 7192100 11706000 9558100 12881000 12036000 13806000 33727000 61043 3120;4251 54917 515269;515270;515271;515272;515273;515274;515275;515276;515277;515278;515279;515280;515281;515282 408932;408933;408934;408935 408933 2 YSLATGNWGDQK Unmodified 1338.6204 0.62042929 1291 P30876 POLR2B DNA-directed RNA polymerase II subunit RPB2 yes yes 0 0 0 By MS/MS 2 0 1 1 61.34 55.465 2 4.264E-13 71409 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 163.38 134.98 63023000 0 63023000 0 0 0 0 0 0 0 0 0 0 0 0 0 61044 1291 54918 515283 408936 408936 0 YSLDPENPTK Unmodified 1162.5506 0.55061839 1076 P18621 RPL17 60S ribosomal protein L17 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 44.831 45.003 2 3.8162E-54 50507 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 209.58 201.65 1292500000 0 0 0 46892000 74304000 75461000 74837000 69232000 62033000 105910000 125330000 173700000 198290000 123070000 163400000 61045 1076 54919 515284;515285;515286;515287;515288;515289;515290;515291;515292;515293;515294;515295 408937;408938;408939;408940;408941;408942;408943;408944;408945;408946;408947;408948;408949;408950;408951;408952;408953;408954;408955;408956;408957;408958;408959;408960 408953 23 YSLEPVAVELK Unmodified 1246.6809 0.68090428 733 P00558 PGK1 Phosphoglycerate kinase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.46 3.95 2 11 3 12 4 9 3 1 1 1 1 1 1 1 1 1 1 1 1 81.491 80.058 1;2;3 2.6088E-08 96072 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 185.29 105.39 25846000000 1027300000 21559000000 887840000 33527000 24040000 33552000 32815000 39061000 25639000 44069000 331540000 289970000 26225000 284960000 1207200000 61046 733 54920 515296;515297;515298;515299;515300;515301;515302;515303;515304;515305;515306;515307;515308;515309;515310;515311;515312;515313;515314;515315;515316;515317;515318;515319;515320;515321;515322;515323 408961;408962;408963;408964;408965;408966;408967;408968;408969;408970;408971;408972;408973;408974;408975;408976;408977;408978;408979;408980;408981;408982;408983;408984;408985;408986;408987;408988;408989;408990 408970 29 YSLEQDIREK Unmodified 1279.6408 0.64083038 4836 Q9UBC2 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.33 0.471 2 1 1 1 1 46.88 41.38 3 0.0016728 52142 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 83.397 63.387 42316000 4818200 8590500 28908000 0 0 0 0 0 0 0 0 0 0 0 0 61047 4836 54921 515324;515325;515326 408991;408992 408992 2 YSLIVAQHVEK Unmodified 1285.703 0.7030367 2291 Q13439 GOLGA4 Golgin subfamily A member 4 yes yes 0 0 0 By MS/MS 2 0 1 1 61.252 53.011 2 0.027178 71715 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 54.539 37.3 8778800 8778800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 61048 2291 54922 515327 408993 408993 1 YSLKPNDQILAEDK Unmodified 1632.8359 0.83590137 1765 P55263 ADK Adenosine kinase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 2 2 2 63.019 57.217 2;3 0.00085314 74290 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 69.431 60.603 497850000 35983000 420350000 41521000 0 0 0 0 0 0 0 0 0 0 0 0 61049 1765 54923 515328;515329;515330;515331;515332;515333 408994;408995;408996;408997;408998;408999;409000 408994 7 YSLNTDSSVSYIDSAVISPDTVPLGTGTSILSK Unmodified 3386.6981 0.69807707 1273 P30260 CDC27 Cell division cycle protein 27 homolog yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 2 1 96.659 93.147 3 3.7328E-06 113328 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 41.89 39.837 49699000 0 42203000 7495300 0 0 0 0 0 0 0 0 0 0 0 0 61050 1273 54924 515334;515335;515336 409001;409002;409003 409003 3 YSLPTPK Unmodified 804.43815 0.43815481 5010 Q9ULX3 NOB1 RNA-binding protein NOB1 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 44.989 45.148 2 0.039143 50771 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 69.176 53.955 51980000 0 0 0 0 5237600 7290400 0 4557200 5413700 9309100 0 9373500 10798000 0 0 61051 5010 54925 515337;515338;515339;515340;515341;515342;515343 409004;409005;409006 409004 3 YSLQSANASSLSSGQLK Unmodified 1739.869 0.86899241 4371 Q9H2P0 ADNP Activity-dependent neuroprotector homeobox protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.533 60.637 2 7.0147E-37 69107 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 132.59 121.68 79025000 0 0 0 4770400 4183000 6429600 6150300 5756200 3435500 8355200 8696100 8996800 6481700 5449600 10321000 61052 4371 54926 515344;515345;515346;515347;515348;515349;515350;515351;515352;515353;515354;515355 409007;409008;409009;409010;409011;409012;409013;409014;409015;409016;409017;409018 409016 12 YSLSGGGTSSH Unmodified 1051.4571 0.45705235 5279 Q9Y6E0 STK24 Serine/threonine-protein kinase 24;Serine/threonine-protein kinase 24 36 kDa subunit;Serine/threonine-protein kinase 24 12 kDa subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 21.071 21.281 2 0.00032433 20907 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.741 76.038 83884000 0 0 0 4257000 5132000 8801000 7251300 0 3782400 8361900 9330300 9634600 7532000 7034600 12767000 61053 5279 54927 515356;515357;515358;515359;515360;515361;515362;515363;515364;515365;515366 409019;409020;409021;409022;409023;409024;409025;409026;409027;409028 409022 10 YSLTPEGLELAQK Unmodified 1447.7559 0.75586013 3940 Q96NY9 MUS81 Crossover junction endonuclease MUS81 yes yes 0 0 0 By MS/MS 10 0 1 1 76.616 76.774 2 0.036091 88498 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 33.088 11.625 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 61054 3940 54928 515367 409029 409029 1 YSLTYIYTGLSK Unmodified 1407.7286 0.72858275 1185 P25311 AZGP1 Zinc-alpha-2-glycoprotein yes yes 0 0 0 By matching By MS/MS By matching By matching By matching By matching By matching By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 82 82.033 2 0.00024247 94904 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 98.943 87.229 105250000 0 0 0 16779000 5174200 11699000 0 0 4976000 12475000 11396000 15200000 0 7365200 20184000 61055 1185 54929 515368;515369;515370;515371;515372;515373;515374;515375;515376 409030 409030 1 YSLVEAK Unmodified 808.43307 0.43306943 1029 P15924 DSP Desmoplakin yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 33.07 33.255 2 0.02229 35861 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 105.2 39.528 558720000 0 0 0 82608000 32019000 28037000 32597000 66283000 20380000 46298000 45734000 70356000 59126000 28087000 47197000 61056 1029 54930 515377;515378;515379;515380;515381;515382;515383;515384;515385;515386;515387;515388 409031;409032;409033 409031 3 YSMQGEEAR Unmodified 1069.4499 0.44985848 900 P0C7T5 ATXN1L Ataxin-1-like yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 19.134 19.587 2 0.023114 19005 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 51.193 35.561 5457700 0 0 0 0 0 0 0 0 0 0 0 0 0 2743400 2714300 61057 900 54931 515389;515390 409034;409035 409035 2 YSMVELQDPNSNR Unmodified 1551.6988 0.69875596 36 A8K2U0 A2ML1 Alpha-2-macroglobulin-like protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 58.294 57.619 2 4.4833E-13 66231 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 136.63 124.06 16340000 0 0 0 16340000 0 0 0 0 0 0 0 0 0 0 0 61058 36 54932 515391;515392;515393 409036;409037;409038 409038 3 YSMVELQDPNSNR Oxidation (M) 1567.6937 0.69367058 36 A8K2U0 A2ML1 Alpha-2-macroglobulin-like protein 1 yes yes 0 1 0 By MS/MS By matching By matching 10 0 3 1 1 1 41.375 41.411 2 0.00043824 46540 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 73.887 63.363 10844000 0 0 0 5528500 0 0 0 2500600 0 0 2815200 0 0 0 0 61059 36 54932 515394;515395;515396 409039 409039 35 1 YSMYNSVSQK Unmodified 1205.5387 0.53867349 3313 Q8N1G2 CMTR1 Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 33.52 33.668 2 0.0060966 35892 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 66.299 42.979 26002000 0 0 0 0 2086000 0 2607900 2466600 1358400 3874900 5335400 0 4212400 4060400 0 61060 3313 54933 515397;515398;515399;515400;515401;515402;515403;515404;515405 409040;409041;409042;409043;409044;409045 409044 6 YSNDLYELQASR Unmodified 1457.6787 0.67867245 1663 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 58.844 58.956 2 2.4227E-05 67420 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 112.83 88.803 280990000 0 0 0 16421000 21894000 20382000 24852000 29517000 14308000 23151000 20985000 22915000 26332000 22992000 37237000 61061 1663 54934 515406;515407;515408;515409;515410;515411;515412;515413;515414;515415;515416;515417 409046;409047;409048;409049;409050;409051;409052;409053;409054;409055;409056;409057;409058;409059;409060;409061;409062;409063 409063 18 YSNDPVVASLAQDIFK Unmodified 1765.8887 0.88866522 3946 Q96P70 IPO9 Importin-9 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.12 3.41 5 1 2 1 4 1 1 1 97.199 93.717 2;3 1.4619E-66 115924 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 192.18 179.6 517030000 9016000 497670000 4474200 0 0 0 0 0 0 2223500 0 0 0 0 3649600 61062 3946 54935 515418;515419;515420;515421;515422;515423;515424;515425 409064;409065;409066;409067;409068;409069;409070;409071;409072;409073;409074 409065 11 YSNEDTLSVALPYFWEHFDK Unmodified 2460.1274 0.12739194 1211 P26641 EEF1G Elongation factor 1-gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.22 0.629 1 5 3 4 4 1 99.921 96.252 2;3 6.5004E-84 117465 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 202.32 182.99 991100000 515690000 466720000 8683900 0 0 0 0 0 0 0 0 0 0 0 0 61063 1211 54936 515426;515427;515428;515429;515430;515431;515432;515433;515434 409075;409076;409077;409078;409079;409080;409081;409082;409083;409084;409085;409086 409085 12 YSNENLDLAR Unmodified 1193.5677 0.56766543 1379 P36776 LONP1 Lon protease homolog, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 42.829 42.53 2 0.0025569 47786 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 95.502 76.719 87978000 0 12341000 0 4538800 4420900 8334500 4937200 5572800 0 7199200 7866600 9866500 6222500 4784200 11893000 61064 1379 54937 515435;515436;515437;515438;515439;515440;515441;515442;515443;515444;515445;515446 409087;409088;409089;409090;409091;409092;409093;409094;409095;409096;409097;409098;409099 409087 13 YSNSALGHVNCTIK Unmodified 1562.7511 0.75112588 4566 Q9NQC3 RTN4 Reticulon-4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 14 1 2 1 2 2 1 1 2 2 40.766 41.06 2;3 3.6269E-19 44735 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 134.56 101.33 163440000 0 0 0 0 18573000 18302000 0 0 12890000 25322000 30743000 6224200 5243900 3485200 42661000 61065 4566 54938 515447;515448;515449;515450;515451;515452;515453;515454;515455;515456;515457;515458;515459;515460 409100;409101;409102;409103;409104;409105 409103 6 YSNSDVIIYVGCGERGNEMSEVLRDFPELTMEVDGK Oxidation (M) 4123.8813 0.8812963 1398 P38606 ATP6V1A V-type proton ATPase catalytic subunit A yes yes 0 1 2 By MS/MS 2 0 1 1 97.886 89.755 4 6.5731E-74 115851 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 106.21 103.84 41242000 41242000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 61066 1398 54939 515461 409106 409106 2167 1 YSNSDVIIYVGCGERGNEMSEVLRDFPELTMEVDGK Unmodified 4107.8864 0.88638167 1398 P38606 ATP6V1A V-type proton ATPase catalytic subunit A yes yes 0 0 2 By MS/MS 2 0 1 1 98.48 90.35 4 6.2469E-118 116565 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 130.26 126.45 34320000 34320000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 61067 1398 54939 515462 409107;409108 409107 2 YSNSEVVTGSGR Unmodified 1254.584 0.58404378 3050 Q7L576 CYFIP1 Cytoplasmic FMR1-interacting protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 22.022 21.735 2 0.013764 22783 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 58.37 35.63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 61068 3050 54940 515463 409109 409109 1 YSNSEVVTGSGRQEAQK Unmodified 1838.8759 0.8758687 3050 Q7L576 CYFIP1 Cytoplasmic FMR1-interacting protein 1 yes yes 0 0 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 19.893 20.058 3 7.2321E-08 20811 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 84.508 68.109 97684000 0 0 0 7259000 6888400 9458700 7798700 6853200 6227300 9642500 12620000 0 8315500 9746500 12874000 61069 3050 54941 515464;515465;515466;515467;515468;515469;515470;515471;515472;515473;515474 409110;409111;409112;409113;409114;409115;409116;409117;409118;409119;409120 409110 8 YSNVIFLEVDVDDCQDVASECEVK Unmodified 2832.247 0.24699109 923 P10599 TXN Thioredoxin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.35 0.478 11 6 12 2 3 97.042 91.727 3 7.697E-82 110661 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 140.66 133.78 294570000 221790000 40947000 31834000 0 0 0 0 0 0 0 0 0 0 0 0 61070 923 54942 515475;515476;515477;515478;515479;515480;515481;515482;515483;515484;515485;515486;515487;515488;515489;515490;515491 409121;409122;409123;409124;409125;409126;409127;409128;409129;409130;409131;409132;409133;409134;409135;409136;409137;409138;409139;409140;409141;409142;409143;409144;409145;409146;409147;409148;409149;409150;409151;409152 409138 32 YSPAPGGPPGAPTELLQQLEAEEK Unmodified 2478.2278 0.22783427 3666 Q92817 EVPL Envoplakin yes yes 0 0 0 By MS/MS 2 0 1 1 96.378 91.556 3 6.4452E-08 113414 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 71.651 57.92 27480000 0 27480000 0 0 0 0 0 0 0 0 0 0 0 0 0 61071 3666 54943 515492 409153 409153 1 YSPDVLK Unmodified 820.43307 0.43306943 2828 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.208 37.388 2 0.035265 42019 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 70.912 27.912 169980000 0 0 0 7879400 7932800 14761000 9920000 9108300 7077200 13677000 15031000 22602000 12605000 14162000 35227000 61072 2828 54944 515493;515494;515495;515496;515497;515498;515499;515500;515501;515502;515503;515504 409154 409154 1 YSPLHNVK Unmodified 956.50797 0.50796571 1533 P48147 PREP Prolyl endopeptidase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 27.631 23.32 2 0.039421 28363 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 70.912 38.442 483940000 306740000 117410000 59791000 0 0 0 0 0 0 0 0 0 0 0 0 61073 1533 54945 515505;515506;515507 409155;409156 409156 2 YSPPAISPLVSEK Unmodified 1386.7395 0.73948179 2439 Q14694 USP10 Ubiquitin carboxyl-terminal hydrolase 10 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 72.494 72.563 2 0.00052171 83519 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 78.653 60.341 143560000 0 0 0 9203500 7964800 10998000 9692700 17540000 11138000 10388000 13832000 14366000 11834000 11878000 14723000 61074 2439 54946 515508;515509;515510;515511;515512;515513;515514;515515;515516;515517;515518;515519 409157;409158;409159;409160;409161;409162;409163;409164;409165;409166;409167;409168;409169 409158 13 YSPPPQSPELYVAASK Unmodified 1732.8672 0.8672015 2831 Q5VZE5 NAA35 N-alpha-acetyltransferase 35, NatC auxiliary subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 9.47 2 1 14 1 2 2 2 1 1 2 2 2 66.495 66.081 2;3 1.0155E-07 75712 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 111.34 105.44 409990000 0 37473000 0 9571600 18664000 14920000 3267700 2249600 0 72954000 107090000 143800000 0 0 0 61075 2831 54947 515520;515521;515522;515523;515524;515525;515526;515527;515528;515529;515530;515531;515532;515533;515534 409170;409171;409172;409173;409174;409175;409176 409176 2 YSPTSPTYSPTSPK Unmodified 1511.7144 0.71438925 1179 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes no 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.55 3.09 2 9 1 1 1 1 1 1 1 1 1 1 1 40.547 39.533 2 1.3753E-29 48984 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 143 97.343 367570000 8135100 228360000 0 0 0 0 0 10430000 11841000 0 22446000 23909000 15713000 19294000 27443000 61076 1179 54948 515535;515536;515537;515538;515539;515540;515541;515542;515543;515544;515545 409177;409178;409179;409180;409181;409182;409183;409184;409185;409186 409178 10 YSPTSPTYSPTSPVYTPTSPK Unmodified 2257.079 0.079044767 1179 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 66.33 66.409 2 1.1054E-58 76128 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 127.71 113.75 68785000 0 0 0 2353400 4806200 4485800 0 5711000 5086300 6084100 8562400 8332900 4940600 6934500 11488000 61077 1179 54949 515546;515547;515548;515549;515550;515551;515552;515553;515554;515555;515556 409187;409188;409189;409190;409191;409192;409193 409191 7 YSPTSPTYSPTTPK Unmodified 1525.73 0.73003931 1179 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.278 42.455 2 0.0025979 47445 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 50.354 43.821 119560000 0 0 0 5246100 4866000 6238300 6674800 6489000 6443200 7776100 9702300 14682000 11018000 10272000 30153000 61078 1179 54950 515557;515558;515559;515560;515561;515562;515563;515564;515565;515566;515567;515568 409194;409195;409196;409197;409198;409199;409200;409201;409202 409199 9 YSQLVVETIRR Unmodified 1362.7619 0.76194857 3612 Q92522 H1FX Histone H1x yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 54.18 54.282 3 0.0022626 61775 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 61.344 45.479 45747000 0 0 0 3476600 2262400 3816100 4863200 2639500 3042000 5408900 0 11475000 2487500 0 6275000 61079 3612 54951 515569;515570;515571;515572;515573;515574;515575;515576;515577;515578 409203;409204;409205;409206;409207 409204 5 YSQQMVK Unmodified 882.42694 0.4269382 5189 Q9Y4A5 TRRAP Transformation/transcription domain-associated protein yes yes 0 0 0 By MS/MS 2 0 1 1 19.06 15.577 2 0.031622 20462 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 88.643 56.707 24979000 0 24979000 0 0 0 0 0 0 0 0 0 0 0 0 0 61080 5189 54952 515579 409208;409209 409208 2 YSQSDLEQTK Unmodified 1197.5513 0.55134667 2431 Q14683 SMC1A Structural maintenance of chromosomes protein 1A yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.33 3.34 1 2 12 2 1 1 1 1 1 1 1 1 1 1 1 1 1 30.05 29.922 2 9.8081E-32 25098 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 178.94 147.87 270810000 27039000 28119000 0 12065000 11615000 15535000 11692000 18240000 10889000 18061000 28624000 22698000 19763000 17745000 28723000 61081 2431 54953 515580;515581;515582;515583;515584;515585;515586;515587;515588;515589;515590;515591;515592;515593;515594 409210;409211;409212;409213;409214;409215;409216;409217;409218;409219;409220;409221;409222;409223;409224;409225;409226 409223 16 YSQVLANGLDNK Unmodified 1320.6674 0.66737948 1885 P62269 RPS18 40S ribosomal protein S18 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48.431 47.877 2 2.5323E-14 53439 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 191.48 150.06 3831500000 0 2337700000 10547000 70877000 74863000 88548000 71647000 64849000 72173000 136380000 158170000 206910000 169630000 149580000 219640000 61082 1885 54954 515595;515596;515597;515598;515599;515600;515601;515602;515603;515604;515605;515606;515607;515608 409227;409228;409229;409230;409231;409232;409233;409234;409235;409236;409237;409238;409239;409240;409241;409242;409243;409244 409242 18 YSQYLDR Unmodified 943.43995 0.43994572 2475 Q15020 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 27.871 28.12 2 0.030779 30528 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 74.423 16.97 95776000 0 0 0 0 5101100 7400000 4692300 6246100 0 7903400 13628000 9373800 11698000 13731000 16003000 61083 2475 54955 515609;515610;515611;515612;515613;515614;515615;515616;515617;515618 409245;409246;409247;409248;409249;409250 409250 5 YSQYQQAIYK Unmodified 1290.6245 0.62445203 208 O14744 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 40.892 40.118 2 0.00076991 43774 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 135.79 113.7 659700000 0 434670000 4160100 13990000 12187000 10341000 11823000 17346000 8608900 17246000 27156000 20710000 25311000 25037000 31118000 61084 208 54956 515619;515620;515621;515622;515623;515624;515625;515626;515627;515628;515629;515630;515631;515632;515633;515634 409251;409252;409253;409254;409255;409256;409257;409258;409259;409260;409261;409262;409263;409264;409265;409266;409267 409256 16 YSRHYSPEDEPSPEAQPIAAYK Unmodified 2534.1714 0.17138202 3011 Q6ZSR9 Uncharacterized protein FLJ45252 yes yes 0 0 1 By MS/MS By matching 2 0 3 2 1 57.104 50.335 3;4 2.3646E-34 68638 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 114.88 106.16 76156000 73201000 0 2955100 0 0 0 0 0 0 0 0 0 0 0 0 61085 3011 54957 515635;515636;515637 409268;409269 409269 1 YSRKPNVGCQQDSEELLK Unmodified 2150.0426 0.042616456 3 A0AVT1 UBA6 Ubiquitin-like modifier-activating enzyme 6 yes yes 0 0 2 By MS/MS 2 0 1 1 47.159 39.681 3 0.0046498 54819 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.525 40.244 7630500 7630500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 61086 3 54958 515638 409270 409270 1 YSSDYFQAPSDYR Unmodified 1597.6685 0.66850169 2157 Q08380 LGALS3BP Galectin-3-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 62.176 62.345 2 2.4169E-11 71168 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 118.4 113.79 62717000 0 0 0 0 3827800 6693600 2256800 4943200 0 6797500 5948500 12286000 4566800 5617000 9780000 61087 2157 54959 515639;515640;515641;515642;515643;515644;515645;515646;515647;515648;515649 409271;409272;409273;409274;409275;409276;409277;409278;409279;409280;409281 409279 10 YSSIVMQDTK Unmodified 1170.5591 0.55907458 2771 Q5T2E6 C10orf76 UPF0668 protein C10orf76 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 39.447 39.548 2 0.0074619 42687 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.325 60.556 29594000 0 0 0 2958100 4101700 4990800 0 0 0 4236300 4285400 0 0 2992800 6029000 61088 2771 54960 515650;515651;515652;515653;515654;515655;515656 409282;409283;409284 409283 3 YSSLEQSER Unmodified 1097.4989 0.49891717 622 O95149 SNUPN Snurportin-1 yes yes 0 0 0 By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By matching 10 0 9 1 1 1 1 1 1 1 1 1 17.294 17.448 2 0.040497 17644 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 44.377 33.504 29878000 0 0 0 2864900 1479600 3174100 1844000 0 0 3137700 0 4818800 3893800 2962700 5702300 61089 622 54961 515657;515658;515659;515660;515661;515662;515663;515664;515665 409285 409285 1 YSSLNLFDTYK Unmodified 1349.6503 0.65033243 1546 P48634 PRRC2A Protein PRRC2A yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.77 2.89 2 11 1 1 1 1 1 1 1 1 1 1 1 1 1 80.269 79.708 2 0.00043854 91936 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 96.89 87.184 114140000 0 24149000 1614500 5610800 3577100 8483800 5390000 7144300 7676900 9277400 9960600 14553000 0 0 16706000 61090 1546 54962 515666;515667;515668;515669;515670;515671;515672;515673;515674;515675;515676;515677;515678 409286;409287;409288;409289;409290;409291;409292;409293;409294;409295;409296;409297 409293 12 YSSNRPPIASLSQTEVVR Unmodified 2003.0436 0.043602734 2492 Q15058 KIF14 Kinesin-like protein KIF14 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 63.702 63.769 3 0.0031491 73042 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 36.744 31.316 49591000 0 0 0 3095400 4164800 5412200 4921000 0 0 6690700 5818700 7508400 0 5434800 6544700 61091 2492 54963 515679;515680;515681;515682;515683;515684;515685;515686;515687 409298;409299;409300 409300 3 YSSQDADEQDWEFQK Unmodified 1874.7595 0.75950154 4285 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.345 56.468 2 1.7082E-27 63508 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 136.96 130.26 95186000 0 0 0 4467600 7036700 7248300 5117100 5790200 5176300 7308300 10730000 10644000 9839500 7536200 14292000 61092 4285 54964 515688;515689;515690;515691;515692;515693;515694;515695;515696;515697;515698;515699 409301;409302;409303;409304;409305;409306;409307;409308;409309;409310;409311;409312;409313 409304 13 YSSQFGGGSQYAYFHEEDESSFQLVDTARTQK Unmodified 3661.6233 0.623349 278 O15371 EIF3D Eukaryotic translation initiation factor 3 subunit D yes yes 0 0 1 By MS/MS 2 0 1 1 84.146 76.015 4 0.0025008 99360 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 31.252 29.37 10361000 10361000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 61093 278 54965 515700 409314;409315 409314 2 YSSSFCTHDR Unmodified 1258.5037 0.50368497 778 P04183 TK1 Thymidine kinase, cytosolic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.549 18.744 3 0.032616 19212 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 32.008 30.121 32466000 0 0 0 2972000 2580700 1691500 2752800 2205300 1344100 2145500 2262900 4379000 2973400 1954900 5203800 61094 778 54966 515701;515702;515703;515704;515705;515706;515707;515708;515709;515710;515711;515712 409316;409317 409317 2 YSSSGSPANSFHFK Unmodified 1514.679 0.6790068 150 O00418 EEF2K Eukaryotic elongation factor 2 kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 47.362 47.535 3 0.011288 52678 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 36.445 32.729 74666000 0 0 0 3580000 4514900 0 3944200 4095000 2743500 7053400 10397000 7696100 8034500 6612100 15995000 61095 150 54967 515713;515714;515715;515716;515717;515718;515719;515720;515721;515722;515723 409318;409319 409318 2 YSSSSIPEPFGSR Unmodified 1412.6572 0.65720872 3542 Q8WUF5 PPP1R13L RelA-associated inhibitor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 64.693 64.781 2 1.0797E-12 73602 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 129.7 111.39 430250000 0 0 0 21804000 24362000 28791000 31911000 28228000 25288000 43601000 50461000 46754000 36746000 33429000 58870000 61096 3542 54968 515724;515725;515726;515727;515728;515729;515730;515731;515732;515733;515734;515735 409320;409321;409322;409323;409324;409325;409326;409327;409328;409329;409330;409331;409332 409323 8 YSSVSEPAK Unmodified 966.46583 0.46582612 5085 Q9Y263 PLAA Phospholipase A-2-activating protein yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14.883 14.282 2 0.0031541 14207 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 92.439 71.919 219120000 20766000 67186000 1220800 0 3225100 16865000 0 5736800 4224100 16638000 14710000 11351000 8755500 13601000 34844000 61097 5085 54969 515736;515737;515738;515739;515740;515741;515742;515743;515744;515745;515746;515747;515748;515749 409333;409334;409335;409336;409337;409338;409339;409340;409341;409342;409343 409333 11 YSTDVSVDEVK Unmodified 1240.5823 0.58231244 721 P00367;P49448 GLUD1;GLUD2 Glutamate dehydrogenase 1, mitochondrial;Glutamate dehydrogenase 2, mitochondrial yes no 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 44.096 44.449 2 0.00063118 49832 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 94.309 66.091 33997000 0 0 0 0 0 0 0 12119000 11497000 0 0 0 0 0 10380000 61098 721 54970 515750;515751;515752 409344;409345;409346;409347 409346 4 YSTHLHLAEDCMK Oxidation (M) 1619.7072 0.70721216 1857 P61764 STXBP1 Syntaxin-binding protein 1 yes yes 0 1 0 By MS/MS By matching 2 0 2 1 1 41.531 35.637 3 0.021044 48899 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 41.621 34.419 26850000 20475000 6375800 0 0 0 0 0 0 0 0 0 0 0 0 0 61099 1857 54971 515753;515754 409348 409348 0 YSTHLHLAEDCMK Unmodified 1603.7123 0.71229754 1857 P61764 STXBP1 Syntaxin-binding protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 53.551 45.488 3 0.02206 62613 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.797 40.849 11636000 11636000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 61100 1857 54971 515755 409349 409349 0 YSTLSLFDK Unmodified 1072.5441 0.54407645 2736 Q5JSZ5 PRRC2B Protein PRRC2B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 74.652 74.083 2 0.015068 85534 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 57.708 38.932 73544000 8722300 0 0 3485400 3357100 4816200 3875300 4787600 4765400 6549300 6034800 8085900 4371300 4981500 9712100 61101 2736 54972 515756;515757;515758;515759;515760;515761;515762;515763;515764;515765;515766;515767;515768 409350;409351;409352;409353;409354;409355 409351 6 YSTPHAFTFNTSSPSSEGSLSQR Unmodified 2487.1302 0.13024549 769 P04049 RAF1 RAF proto-oncogene serine/threonine-protein kinase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 67.119 67.17 3 0.00053939 77009 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 41.911 38.108 53441000 0 0 0 3898200 0 0 0 8300200 8445800 0 12914000 0 8910400 10973000 0 61102 769 54973 515769;515770;515771;515772;515773;515774 409356;409357;409358;409359;409360;409361 409357 4 YSTSLEK Unmodified 826.40725 0.40724861 2475 Q15020 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 18.694 18.79 2 0.024937 17648 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 81.784 22.143 65092000 0 0 0 6738200 0 9082300 7898900 0 0 12387000 0 0 16576000 12409000 0 61103 2475 54974 515775;515776;515777;515778;515779;515780 409362;409363;409364 409363 3 YSTSVVEK Unmodified 911.46001 0.46001246 4224 Q9BXF6 RAB11FIP5 Rab11 family-interacting protein 5 yes yes 0 0 0 By matching By matching By matching By MS/MS By matching 10 0 5 1 1 1 1 1 21.156 21.553 2 0.04296 22376 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 49.423 18.811 17430000 0 0 0 0 0 0 0 2182300 0 0 6788800 2686700 2848700 2923300 0 61104 4224 54975 515781;515782;515783;515784;515785 409365 409365 1 YSTVQYSK Unmodified 974.47091 0.4709115 2075 Q02413 DSG1 Desmoglein-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 20.182 20.295 2 0.0060877 20742 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 103.83 64.871 26244000 0 0 0 8226600 0 0 0 13824000 0 0 0 0 4193900 0 0 61105 2075 54976 515786;515787;515788 409366;409367;409368 409366 3 YSVADIER Unmodified 951.46616 0.46616048 214 O14777 NDC80 Kinetochore protein NDC80 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 45.686 45.942 2 0.013807 50623 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.501 29.037 86733000 0 0 0 0 4972100 0 5146600 5902500 6226900 10104000 10505000 15864000 6754500 9506200 11752000 61106 214 54977 515789;515790;515791;515792;515793;515794;515795;515796;515797;515798 409369;409370;409371;409372;409373;409374;409375;409376;409377;409378 409370 10 YSVDIPLDK Unmodified 1048.5441 0.54407645 1847 P61353 RPL27 60S ribosomal protein L27 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 67.638 67.72 2 0.0030095 76857 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 126.41 81.965 1215900000 0 0 0 81437000 70285000 79524000 72707000 86159000 58998000 117760000 122050000 155330000 119630000 105410000 146590000 61107 1847 54978 515799;515800;515801;515802;515803;515804;515805;515806;515807;515808;515809;515810 409379;409380;409381;409382;409383;409384;409385;409386;409387;409388;409389;409390 409381 12 YSVINEINK Unmodified 1078.5659 0.56587452 2838 Q63HN8 RNF213 E3 ubiquitin-protein ligase RNF213 yes yes 0 0 0 By MS/MS 2 0 1 1 54.497 50.6 2 0.032454 63408 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 65.246 43.115 2576600 0 0 2576600 0 0 0 0 0 0 0 0 0 0 0 0 61108 2838 54979 515811 409391 409391 1 YSVQLLTPANLLAK Unmodified 1529.8817 0.88172935 5086 Q9Y265 RUVBL1 RuvB-like 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 89.819 89.891 2 0.00031349 104130 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 78.653 71.253 155520000 0 0 0 1136500 5034500 10592000 5440000 12365000 6592400 19250000 13588000 15006000 6107700 9707100 50702000 61109 5086 54980 515812;515813;515814;515815;515816;515817;515818;515819;515820;515821;515822;515823 409392;409393;409394;409395;409396;409397;409398;409399;409400 409398 9 YSVQTADHR Unmodified 1075.5047 0.50467125 2626 Q16658 FSCN1 Fascin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 13.463 13.673 2 0.0025815 12206 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 127.56 80.571 302290000 0 0 0 13081000 0 10278000 0 8446400 7235500 16050000 34403000 35837000 15440000 27365000 134150000 61110 2626 54981 515824;515825;515826;515827;515828;515829;515830;515831;515832;515833 409401;409402;409403 409402 0 YSVSSPNSLGVVPYLGGEQSYYR Unmodified 2521.2125 0.21251856 2212 Q12948 FOXC1 Forkhead box protein C1 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 86.246 86.382 3 0.032872 99922 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 19.044 11.052 7395100 0 0 0 0 0 0 0 0 0 3717600 0 0 0 0 3677500 61111 2212 54982 515834;515835 409404 409404 1 YSVWIGGSILASLSTFQQMWISK Oxidation (M) 2617.325 0.32504589 1951;1815;1958;2711 P60709;P63261;P68032;P63267;P62736;Q562R1 ACTB;ACTG1;ACTC1;ACTG2;ACTA2;ACTBL2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle;Beta-actin-like protein 2 no no 0 1 0 By MS/MS By MS/MS By MS/MS 2.29 0.452 5 2 2 3 2 103.98 99.748 3 8.5157E-24 121540 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 103.92 96.472 77089000 49101000 14018000 13970000 0 0 0 0 0 0 0 0 0 0 0 0 61112 1815;1951;1958;2711 54983 515836;515837;515838;515839;515840;515841;515842 409405;409406;409407;409408;409409;409410;409411;409412 409411 2948 8 YSVWIGGSILASLSTFQQMWISK Unmodified 2601.3301 0.33013127 1951;1815;1958;2711 P60709;P63261;P68032;P63267;P62736;Q562R1 ACTB;ACTG1;ACTC1;ACTG2;ACTA2;ACTBL2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle;Beta-actin-like protein 2 no no 0 0 0 By MS/MS By MS/MS 2.5 0.5 2 2 2 2 105.6 100.55 3 6.8807E-103 125376 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 158.52 154.71 126290000 93664000 32625000 0 0 0 0 0 0 0 0 0 0 0 0 0 61113 1815;1951;1958;2711 54983 515843;515844;515845;515846 409413;409414;409415 409413 3 YSYCTGEAGK Unmodified 1134.4652 0.4651742 652 O95391 SLU7 Pre-mRNA-splicing factor SLU7 yes yes 0 0 0 By MS/MS 2 0 1 1 22.718 18.692 2 0.033619 24758 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 57.55 46.481 7843500 0 7843500 0 0 0 0 0 0 0 0 0 0 0 0 0 61114 652 54984 515847 409416 409416 1 YSYQYTVANK Unmodified 1235.5823 0.58225287 3729 Q969X5 ERGIC1 Endoplasmic reticulum-Golgi intermediate compartment protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 39.413 39.434 2 0.0023335 43883 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 96.331 84.284 39658000 0 0 0 3002500 3293900 5195000 3305800 0 3821900 6305300 8816000 0 0 5918100 0 61115 3729 54985 515848;515849;515850;515851;515852;515853;515854;515855;515856;515857 409417;409418;409419;409420;409421;409422;409423;409424;409425 409418 9 YSYYDESQGEIYR Unmodified 1671.7053 0.70528113 5135 Q9Y316 MEMO1 Protein MEMO1 yes yes 0 0 0 By MS/MS 10 0 1 1 55.007 55.647 2 0.00020262 62321 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 83.397 79.088 6807100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6807100 61116 5135 54986 515858 409426 409426 1 YTAARLHEK Unmodified 1087.5774 0.57744226 1518 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 0 0 1 By MS/MS 2 0 1 1 14.012 10.017 2 0.011354 15067 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 108.43 70.705 118420000 118420000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 61117 1518 54987 515859 409427 409427 0 YTAGTPYK Unmodified 899.43888 0.43888309 3626 Q92567 FAM168A Protein FAM168A yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 20.203 20.415 2 0.0079876 20964 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 87.754 59.5 134350000 0 0 0 7384300 8819300 0 7904800 7384000 6919100 13250000 20535000 23262000 16179000 0 22710000 61118 3626 54988 515860;515861;515862;515863;515864;515865;515866;515867;515868;515869 409428;409429;409430;409431;409432;409433;409434;409435 409428 8 YTAVLAR Unmodified 792.44939 0.4493882 512 O75528 TADA3 Transcriptional adapter 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 31.225 31.346 2 0.030808 33762 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 74.396 43.338 54963000 0 0 0 4786900 5979100 5799800 4433800 0 3762500 7262000 8937700 11391000 2610300 0 0 61119 512 54989 515870;515871;515872;515873;515874;515875;515876;515877;515878 409436;409437;409438 409436 3 YTCQELQR Unmodified 1096.4971 0.49714303 2343 Q13769 THOC5 THO complex subunit 5 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 22.919 23.14 2 0.0047759 22975 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 113.7 91.565 74747000 0 0 0 0 3554800 0 4060300 3083300 7068000 8702900 5416400 0 19064000 13867000 9930000 61120 2343 54990 515879;515880;515881;515882;515883;515884;515885;515886;515887;515888 409439;409440;409441;409442;409443;409444;409445 409443 7 YTDELATQPR Unmodified 1192.5724 0.57241646 584 O94782 USP1 Ubiquitin carboxyl-terminal hydrolase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching 10 0 11 1 1 1 1 1 1 1 1 1 1 1 32.768 33.013 2 0.00089969 35007 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 116.37 101.59 69412000 0 0 0 0 3955500 7410900 5391600 0 3247100 8466000 8711400 9742100 7321500 6399700 8766400 61121 584 54991 515889;515890;515891;515892;515893;515894;515895;515896;515897;515898;515899 409446;409447;409448;409449;409450;409451;409452;409453;409454 409452 9 YTDGDQNHQSGSEK Unmodified 1564.639 0.63899248 4332 Q9H0K6 PUS7L Pseudouridylate synthase 7 homolog-like protein yes yes 0 0 0 By MS/MS 2 0 1 1 5.7292 2.4888 3 0.014877 4521 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 24.697 19.782 39232000 0 39232000 0 0 0 0 0 0 0 0 0 0 0 0 0 61122 4332 54992 515900 409455 409455 1 YTDINMEDFK Unmodified 1274.5489 0.54890383 3621 Q92547 TOPBP1 DNA topoisomerase 2-binding protein 1 yes yes 0 0 0 By matching By matching By MS/MS 10 0 3 1 1 1 64.592 64.77 2 0.021799 73367 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 46.457 28.195 5607300 0 0 0 0 0 0 0 1076400 0 0 0 0 1952500 2578400 0 61123 3621 54993 515901;515902;515903 409456 409456 1 YTDLNSNDVTGLR Unmodified 1466.7001 0.70013617 2470 Q15007 WTAP Pre-mRNA-splicing regulator WTAP yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS 10 0 5 1 1 1 1 1 54.281 54.358 2 0.0007766 61768 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 85.958 63.218 11460000 0 0 0 0 2080100 0 3256600 0 1321000 0 2273800 0 2528900 0 0 61124 2470 54994 515904;515905;515906;515907;515908 409457;409458;409459 409457 3 YTDLNSNDVTGLRESEEK Unmodified 2068.9549 0.95490689 2470 Q15007 WTAP Pre-mRNA-splicing regulator WTAP yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.71 1 1 11 1 1 1 1 1 1 1 1 1 1 1 1 1 50.711 49.794 3 1.6959E-37 57198 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 126.63 110.49 225510000 5687000 21702000 0 16180000 12999000 18709000 17314000 12260000 15306000 17436000 18274000 0 22968000 18120000 28551000 61125 2470 54995 515909;515910;515911;515912;515913;515914;515915;515916;515917;515918;515919;515920;515921 409460;409461;409462;409463;409464;409465;409466;409467;409468;409469;409470;409471;409472;409473 409472 14 YTDQGGEEEEDYESEEQLQHR Unmodified 2570.0317 0.031713237 475 O75208 COQ9 Ubiquinone biosynthesis protein COQ9, mitochondrial yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.483 41.661 3 5.3084E-156 46092 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 159.75 159.06 220890000 0 0 0 10083000 9179000 14758000 11811000 13353000 18164000 20146000 34181000 30596000 24886000 14847000 18889000 61126 475 54996 515922;515923;515924;515925;515926;515927;515928;515929;515930;515931;515932;515933 409474;409475;409476;409477;409478;409479;409480;409481;409482;409483;409484;409485;409486;409487;409488;409489 409486 16 YTEEDPSGETLSSENK Unmodified 1784.7588 0.75883284 2653 Q2NKX8 ERCC6L DNA excision repair protein ERCC-6-like yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 33.348 33.537 2 1.0861E-19 36802 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 127.17 127.17 47600000 0 0 0 2241600 2486800 3980000 3425100 2559500 0 5905100 4797100 7153200 4827200 3668600 6556200 61127 2653 54997 515934;515935;515936;515937;515938;515939;515940;515941;515942;515943;515944 409490;409491;409492;409493;409494;409495;409496;409497;409498;409499;409500 409491 11 YTEEQIK Unmodified 909.44436 0.4443624 4979 Q9UKY1 ZHX1 Zinc fingers and homeoboxes protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By matching By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 16.647 16.826 2 0.024125 16662 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 95.352 45.233 99993000 0 0 0 4793500 5980800 7368400 7366000 5395300 5786700 8555300 12905000 9866300 8977200 8794100 14205000 61128 4979 54998 515945;515946;515947;515948;515949;515950;515951;515952;515953;515954;515955;515956 409501;409502;409503 409502 2 YTEFLTGLGR Unmodified 1155.5924 0.59242362 1602 P49815 TSC2 Tuberin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 74.899 74.942 2 0.0019707 86443 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 87.308 66.007 43260000 0 0 0 1549900 2249700 0 2710100 4605600 4331000 5570900 5386900 7683000 5239700 3933100 0 61129 1602 54999 515957;515958;515959;515960;515961;515962;515963;515964;515965;515966;515967 409504;409505;409506;409507;409508;409509;409510;409511;409512;409513;409514 409504 11 YTEFYHVPTHSDASK Unmodified 1780.8057 0.80566387 3865 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 42.011 42.188 3 0.017796 46515 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 39.517 34.462 161030000 0 0 0 5467000 4463200 10748000 8714500 9421900 9417700 15138000 20761000 16292000 14989000 13546000 32066000 61130 3865 55000 515968;515969;515970;515971;515972;515973;515974;515975;515976;515977;515978;515979 409515;409516;409517 409517 1 YTEGVQSLNWTK Unmodified 1424.6936 0.69359423 5231 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 64.179 62.794 2 2.592E-22 79846 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 163.65 148.99 529970000 11836000 372800000 3811400 0 6373200 10200000 7427300 11181000 8658900 14842000 16624000 16323000 12564000 8707300 28621000 61131 5231 55001 515980;515981;515982;515983;515984;515985;515986;515987;515988;515989;515990;515991;515992;515993;515994 409518;409519;409520;409521;409522;409523;409524;409525;409526;409527;409528;409529;409530;409531;409532;409533;409534;409535;409536;409537 409523 19 YTELPHGAISEDQAVGPADIPCDSTGQTST Unmodified 3116.3881 0.38805267 4429 Q9H773 DCTPP1 dCTP pyrophosphatase 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.48 1 2 1 12 2 2 1 1 1 1 1 1 1 1 1 1 1 1 77.942 77.291 3 3.2357E-29 86919 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.292 67.312 1741800000 46893000 1539600000 0 2231900 6401500 6548500 4582600 6916000 4277200 9486500 14654000 22256000 6807300 19837000 51326000 61132 4429 55002 515995;515996;515997;515998;515999;516000;516001;516002;516003;516004;516005;516006;516007;516008;516009;516010 409538;409539;409540;409541;409542;409543;409544;409545;409546;409547;409548;409549;409550 409540 13 YTELQLEAAK Unmodified 1164.6027 0.60265396 2786 Q5T8P6 RBM26 RNA-binding protein 26 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51.129 50 2 3.6655E-06 56670 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 149.82 129.68 291690000 6578300 4395600 0 18778000 26101000 0 32007000 25994000 54741000 34778000 0 36604000 27262000 24447000 0 61133 2786 55003 516011;516012;516013;516014;516015;516016;516017;516018;516019;516020;516021;516022;516023;516024 409551;409552;409553;409554;409555;409556;409557;409558;409559;409560;409561;409562;409563;409564;409565;409566;409567;409568 409560 17 YTELQLEAAKR Unmodified 1320.7038 0.70376498 2786 Q5T8P6 RBM26 RNA-binding protein 26 yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 10 0 10 1 1 1 1 1 1 1 1 1 1 41.699 41.929 3 0.0046874 47399 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_2 45.433 35.945 57406000 0 0 0 0 4444000 4420200 4868200 3816200 4815200 6719000 5259500 12976000 0 4586300 5500700 61134 2786 55004 516025;516026;516027;516028;516029;516030;516031;516032;516033;516034 409569;409570;409571 409570 3 YTEMDYAR Unmodified 1047.4331 0.43314579 4962 Q9UKD2 MRTO4 mRNA turnover protein 4 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 30.691 31.139 2 0.011504 32579 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 76.774 32.082 45160000 0 0 0 0 0 0 0 0 0 6069800 10786000 8419700 7224800 5030100 7629000 61135 4962 55005 516035;516036;516037;516038;516039;516040 409572;409573;409574;409575 409573 4 YTEMDYARAGNK Unmodified 1417.6296 0.62961376 4962 Q9UKD2 MRTO4 mRNA turnover protein 4 homolog yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 31.712 27.847 3 0.023485 36534 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.172 54.02 27346000 0 22856000 4489400 0 0 0 0 0 0 0 0 0 0 0 0 61136 4962 55006 516041;516042 409576 409576 0 YTEYNEPHESR Unmodified 1423.6004 0.60042213 2450;2069 Q02078;Q06413;Q14814 MEF2A;MEF2C;MEF2D Myocyte-specific enhancer factor 2A;Myocyte-specific enhancer factor 2C;Myocyte-specific enhancer factor 2D no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 1 2 2 2 2 2 2 2 2 2 16.088 16.273 2;3 0.00019721 14667 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 84.507 82.368 501350000 0 0 0 22942000 18547000 23867000 42986000 20740000 28707000 33660000 39886000 86445000 58657000 53544000 71366000 61137 2069;2450 55007 516043;516044;516045;516046;516047;516048;516049;516050;516051;516052;516053;516054;516055;516056;516057;516058;516059;516060;516061;516062;516063;516064;516065 409577;409578;409579;409580;409581;409582;409583;409584;409585;409586;409587;409588;409589 409585 10 YTFAAHMDGTYK Unmodified 1403.618 0.61798644 2519 Q15363 TMED2 Transmembrane emp24 domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 6 3 1 2 57.281 50.898 2;3 0.0051375 66235 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 65.563 58.272 193300000 139980000 36881000 16433000 0 0 0 0 0 0 0 0 0 0 0 0 61138 2519 55008 516066;516067;516068;516069;516070;516071 409590;409591;409592;409593;409594 409590 4 YTFAAHMDGTYK Oxidation (M) 1419.6129 0.61290107 2519 Q15363 TMED2 Transmembrane emp24 domain-containing protein 2 yes yes 0 1 0 By matching By MS/MS By MS/MS 2 0 5 1 2 2 39.888 35.136 2;3 0.011248 44377 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 44.829 44.829 173750000 26728000 80785000 66235000 0 0 0 0 0 0 0 0 0 0 0 0 61139 2519 55008 516072;516073;516074;516075;516076 409595;409596;409597 409597 4142 1 YTFAPSVSLNK Unmodified 1225.6343 0.63428844 4585 Q9NR12 PDLIM7 PDZ and LIM domain protein 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 68.573 68.686 2 0.0014991 78185 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.325 57.656 28403000 0 0 0 4772000 0 0 0 0 0 0 0 6350600 3707800 5367400 8205100 61140 4585 55009 516077;516078;516079;516080;516081;516082;516083 409598;409599;409600;409601;409602;409603 409600 6 YTGAGLSGR Unmodified 880.44028 0.44028008 2111 Q05048 CSTF1 Cleavage stimulation factor subunit 1 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 18.07 18.258 2 0.035371 17933 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 46.129 30.497 48547000 0 0 0 2342600 2411800 3102800 3114200 2765200 1644700 5325200 5034400 5675700 4011600 4057800 9061000 61141 2111 55010 516084;516085;516086;516087;516088;516089;516090;516091;516092;516093;516094;516095 409604;409605 409604 2 YTGASLQGATQLNNK Unmodified 1564.7845 0.7845345 280 O15379 HDAC3 Histone deacetylase 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.903 46.072 2 1.2649E-09 51767 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 121.29 104.06 117250000 0 0 0 5045800 4090600 9449400 3278700 6418600 5967200 10715000 9605900 16229000 15011000 8366000 23073000 61142 280 55011 516096;516097;516098;516099;516100;516101;516102;516103;516104;516105;516106;516107 409606;409607;409608;409609;409610;409611;409612;409613;409614;409615;409616;409617 409614 12 YTGEDFDEDLR Unmodified 1358.5626 0.56263964 2392 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 54.71 54.803 2 0.0061233 61943 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 57.347 51.566 67014000 0 0 0 9038500 6746700 12031000 0 0 0 0 14165000 10294000 0 0 14739000 61143 2392 55012 516108;516109;516110;516111;516112;516113 409618;409619;409620;409621;409622 409620 2 YTGPYPR Unmodified 852.413 0.41300269 3004 Q6ZRI6 C15orf39 Uncharacterized protein C15orf39 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS 10 0 4 1 1 1 1 24.878 25.21 2 0.039014 26545 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 69.234 54.214 13953000 0 0 0 0 0 0 0 0 2313000 3837900 0 2609000 5192900 0 0 61144 3004 55013 516114;516115;516116;516117 409623 409623 1 YTGYGNAAGLLAAR Unmodified 1396.7099 0.709913 4556;4673 Q9NPQ8;Q9NVN3 RIC8A;RIC8B Synembryn-A;Synembryn-B no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 69.254 69.331 2 1.4375E-12 78866 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 105.86 96.506 212240000 0 0 0 6576100 9918100 20366000 12111000 13044000 11243000 19489000 22897000 31361000 19389000 15245000 30603000 61145 4556;4673 55014 516118;516119;516120;516121;516122;516123;516124;516125;516126;516127;516128;516129 409624;409625;409626;409627;409628;409629;409630;409631;409632;409633;409634;409635 409627 12 YTHAANTVVYSSNK Unmodified 1553.7474 0.74742071 2984 Q6UXN9 WDR82 WD repeat-containing protein 82 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 23 2 2 2 2 2 2 2 2 2 2 2 1 22.923 23.11 2;3 8.0005E-20 23437 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 139.76 129 428530000 0 0 0 20176000 27561000 22894000 36166000 28525000 28940000 47812000 22490000 76619000 39662000 65465000 12218000 61146 2984 55015 516130;516131;516132;516133;516134;516135;516136;516137;516138;516139;516140;516141;516142;516143;516144;516145;516146;516147;516148;516149;516150;516151;516152 409636;409637;409638;409639;409640;409641;409642;409643;409644;409645;409646;409647;409648;409649;409650;409651;409652;409653;409654;409655 409652 13 YTHLVDQDTTSFDSAWGQESAQNTK Unmodified 2828.2525 0.25254547 1756 P55081 MFAP1 Microfibrillar-associated protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 7.33 3.77 1 2 1 1 1 71.91 70.544 3 2.5917E-66 88832 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 129.9 123.39 42069000 0 22166000 0 0 0 0 0 0 0 0 0 9174300 0 0 10728000 61147 1756 55016 516153;516154;516155 409656;409657;409658 409656 3 YTIENPR Unmodified 891.44503 0.4450311 3039 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 27.81 28.166 2 0.043233 30120 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 67.344 52.123 288860000 0 0 0 0 0 46988000 0 0 18004000 32561000 47547000 42325000 26186000 0 75248000 61148 3039 55017 516156;516157;516158;516159;516160;516161;516162 409659;409660;409661 409660 3 YTIGHAWTTDYGCSDSK Unmodified 1960.8261 0.82614132 1533 P48147 PREP Prolyl endopeptidase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.17 0.373 5 1 3 2 1 65.128 58.573 2;3 5.6978E-05 78155 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 53.453 49.612 246750000 180530000 45130000 21091000 0 0 0 0 0 0 0 0 0 0 0 0 61149 1533 55018 516163;516164;516165;516166;516167;516168 409662;409663;409664;409665;409666 409665 5 YTIGLGQAK Unmodified 949.52328 0.52328142 2057 Q01581 HMGCS1 Hydroxymethylglutaryl-CoA synthase, cytoplasmic yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 7.62 3.58 3 1 9 1 3 1 1 1 1 1 1 1 1 1 47.566 46.246 2 0.0073022 59550 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.64 84.701 442900000 158070000 193980000 0 9243200 6499000 6924100 4339300 0 0 0 10370000 15632000 8088700 11109000 18641000 61150 2057 55019 516169;516170;516171;516172;516173;516174;516175;516176;516177;516178;516179;516180;516181 409667;409668;409669;409670;409671;409672;409673 409668 7 YTIHSQLEHLQSK Unmodified 1582.8104 0.81035532 4212 Q9BWJ5 SF3B5 Splicing factor 3B subunit 5 yes yes 0 0 0 By matching By MS/MS By MS/MS 10 0 3 1 1 1 42.061 42.288 3 0.0037598 46361 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 40.315 21.492 18296000 0 0 0 0 0 0 1928600 0 0 0 0 0 8622500 7745200 0 61151 4212 55020 516182;516183;516184 409674 409674 1 YTIIPLNK Unmodified 960.56442 0.56441796 643 O95347 SMC2 Structural maintenance of chromosomes protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 65.997 66.082 2 0.0061841 75633 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 103.02 73.679 273270000 0 0 0 13973000 14582000 26447000 17310000 13265000 14016000 25927000 30486000 33588000 23286000 23516000 36880000 61152 643 55021 516185;516186;516187;516188;516189;516190;516191;516192;516193;516194;516195;516196 409675;409676;409677;409678;409679;409680;409681;409682;409683;409684;409685;409686 409681 12 YTISQEAYDQR Unmodified 1372.6259 0.62590859 4006 Q99426 TBCB Tubulin-folding cofactor B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 2 1 1 1 1 1 41.117 41.526 2 0.0010553 45380 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 75.387 57.951 21597000 0 0 0 0 0 0 0 0 0 5232600 3461100 0 0 3846100 9057400 61153 4006 55022 516197;516198;516199;516200;516201;516202;516203 409687;409688;409689;409690;409691;409692;409693;409694 409691 8 YTISQEAYDQRQDTVR Unmodified 1971.9286 0.92863256 4006 Q99426 TBCB Tubulin-folding cofactor B yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 43.748 44.164 3 2.1922E-27 48366 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 125.28 104.19 71844000 0 0 0 0 0 20820000 0 0 0 0 24880000 0 0 0 26143000 61154 4006 55023 516204;516205;516206 409695;409696;409697;409698 409696 3 YTLAAQDLVMR Oxidation (M) 1295.6544 0.65437195 5002 Q9ULR3 PPM1H Protein phosphatase 1H yes yes 0 1 0 By MS/MS 10 0 1 1 66.188 66.328 2 0.0020723 75989 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 90.15 54.712 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 61155 5002 55024 516207 409699 409699 6345 1 YTLETRPNQEGIDVR Unmodified 1789.8959 0.89587586 1006 P14735 IDE Insulin-degrading enzyme yes yes 0 0 1 By MS/MS By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 52.338 52.502 3 0.0020556 58720 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 45.33 35.925 53641000 0 0 0 30243000 0 0 0 0 0 0 6409800 0 0 5161500 11827000 61156 1006 55025 516208;516209;516210;516211 409700;409701;409702;409703 409702 4 YTLETRPNQEGIDVRQELLK Unmodified 2401.2601 0.26013745 1006 P14735 IDE Insulin-degrading enzyme yes yes 0 0 2 By MS/MS 3 0 1 1 76.176 72.619 4 0.033198 87326 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 23.447 16.887 7913500 0 7913500 0 0 0 0 0 0 0 0 0 0 0 0 0 61157 1006 55026 516212 409704 409704 1 YTLFSASSEGQNHSR Unmodified 1682.7649 0.76486169 3518 Q8TEQ6 GEMIN5 Gem-associated protein 5 yes yes 0 0 0 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 45.203 45.572 3 5.8426E-05 50766 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 70.26 66.656 54466000 0 0 0 0 0 9339100 3016600 0 0 9393300 4055400 12242000 0 0 16419000 61158 3518 55027 516213;516214;516215;516216;516217;516218 409705;409706;409707;409708;409709 409709 5 YTLHVVDSPTVK Unmodified 1357.7242 0.72416608 3361 Q8N6R0 METTL13 Methyltransferase-like protein 13 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 52.787 52.995 3 0.0059133 59823 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 44.426 33.674 109160000 0 0 0 0 4578300 13389000 6774000 7027100 8895700 17824000 9328300 11219000 0 10233000 19889000 61159 3361 55028 516219;516220;516221;516222;516223;516224;516225;516226;516227;516228 409710;409711 409710 2 YTLNVLEDLGDGQK Unmodified 1563.7781 0.77805214 986 P13797 PLS3 Plastin-3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 84.545 84.691 2 9.7681E-14 98147 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 143 90.828 106140000 0 0 0 0 0 8987100 4633700 6102300 5063000 11690000 9960500 9943500 0 8654200 41105000 61160 986 55029 516229;516230;516231;516232;516233;516234;516235;516236;516237;516238 409712;409713;409714;409715;409716;409717;409718;409719;409720;409721;409722;409723;409724 409713 13 YTLPLYHAMMGGSEVAQTLAK Oxidation (M) 2296.1232 0.12317496 4394 Q9H4A4 RNPEP Aminopeptidase B yes yes 0 1 0 By MS/MS 2 0 1 1 86.438 81.664 3 0.00043768 101533 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 48.656 43.326 21830000 0 21830000 0 0 0 0 0 0 0 0 0 0 0 0 0 61161 4394 55030 516239 409725 409725 5861 1 YTLPLYHAMMGGSEVAQTLAK Unmodified 2280.1283 0.12826034 4394 Q9H4A4 RNPEP Aminopeptidase B yes yes 0 0 0 By MS/MS 2 0 1 1 95.202 90.338 3 0.0073299 111909 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 23.019 15.026 20452000 0 20452000 0 0 0 0 0 0 0 0 0 0 0 0 0 61162 4394 55030 516240 409726 409726 1 YTLPPGVDPTQVSSSLSPEGTLTVEAPMPK Oxidation (M) 3113.5478 0.54784778 786 P04792 HSPB1 Heat shock protein beta-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5.1 4.04 2 3 1 4 2 3 1 1 1 1 1 92.766 91.568 3 7.7245E-152 108028 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 157.82 151.66 3856700000 126840000 3253100000 2345000 0 0 0 0 0 0 177190000 122210000 0 4618600 0 170370000 61163 786 55031 516241;516242;516243;516244;516245;516246;516247;516248;516249;516250 409727;409728;409729;409730;409731;409732;409733;409734;409735;409736;409737;409738;409739;409740;409741 409730 952 15 YTLPPGVDPTQVSSSLSPEGTLTVEAPMPK Unmodified 3097.5529 0.55293316 786 P04792 HSPB1 Heat shock protein beta-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4.5 3.91 2 6 4 2 6 1 1 1 1 94.827 92.631 3;4 1.7385E-214 110695 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 200.74 198.33 7752300000 126590000 7603400000 0 1462000 0 0 0 0 0 9658200 3864600 0 0 0 7320700 61164 786 55031 516251;516252;516253;516254;516255;516256;516257;516258;516259;516260;516261;516262 409742;409743;409744;409745;409746;409747;409748;409749;409750;409751;409752;409753;409754 409747 13 YTLTMEDLTPALSEYGINVK Oxidation (M) 2273.1137 0.11371571 2214 Q12962 TAF10 Transcription initiation factor TFIID subunit 10 yes yes 0 1 0 By MS/MS 2 0 1 1 92.608 87.697 2 1.7001E-37 108948 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.81 121.35 12515000 0 12515000 0 0 0 0 0 0 0 0 0 0 0 0 0 61165 2214 55032 516263 409755 409755 3602 1 YTMALQQK Oxidation (M) 997.49027 0.49026674 4944 Q9UJX3 ANAPC7 Anaphase-promoting complex subunit 7 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By matching 8.77 2.89 2 11 2 2 1 1 1 1 1 1 1 1 1 16.73 16.294 2 0.010612 20369 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 106.42 65.843 58124000 0 28082000 0 3675100 1714200 2587500 2044900 1957900 0 2524200 3261700 6265000 3111500 2899800 0 61166 4944 55033 516264;516265;516266;516267;516268;516269;516270;516271;516272;516273;516274;516275;516276 409756;409757;409758;409759;409760;409761;409762 409758 6290 7 YTMALQQK Unmodified 981.49535 0.49535211 4944 Q9UJX3 ANAPC7 Anaphase-promoting complex subunit 7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 6.57 3.96 3 4 1 1 1 1 1 1 1 36.829 34.857 2 0.0086853 37941 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 85.359 44.787 136960000 9938300 48810000 3114100 8834900 0 0 0 0 0 0 0 24104000 0 19135000 23026000 61167 4944 55033 516277;516278;516279;516280;516281;516282;516283 409763;409764;409765;409766;409767 409765 5 YTNNEAYFDVIEEIDAIIDK Unmodified 2374.1216 0.12163786 1724 P53677 AP3M2 AP-3 complex subunit mu-2 yes yes 0 0 0 By MS/MS 2 0 1 1 103.69 95.563 2 1.6427E-12 122817 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.303 91.588 5468500 5468500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 61168 1724 55034 516284 409768 409768 1 YTNNEAYFDVVEEIDAIIDK Unmodified 2360.106 0.1059878 5117 Q9Y2T2 AP3M1 AP-3 complex subunit mu-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.36 0.481 7 4 3 6 2 102.47 98.279 2;3 2.7499E-91 121848 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 207.85 201.82 209570000 107770000 94045000 7749600 0 0 0 0 0 0 0 0 0 0 0 0 61169 5117 55035 516285;516286;516287;516288;516289;516290;516291;516292;516293;516294;516295 409769;409770;409771;409772;409773;409774;409775;409776;409777 409776 8 YTPAYAHLVTPAEEGAGGAGLGPSK Unmodified 2413.1914 0.19138918 1627 P50542 PEX5 Peroxisomal targeting signal 1 receptor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 72.418 72.598 3 8.1097E-10 83660 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 54.3 43 110540000 0 0 0 0 0 12951000 7682200 11895000 5800200 11075000 12074000 14602000 6457200 9912300 18094000 61170 1627 55036 516296;516297;516298;516299;516300;516301;516302;516303;516304;516305 409778;409779;409780;409781;409782;409783 409779 5 YTPSGQAGAAASESLFVSNHAY Unmodified 2227.0182 0.018175845 771 P04075 ALDOA Fructose-bisphosphate aldolase A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 3.49 3.06 1 58 5 14 9 40 15 1 1 1 2 2 2 1 2 2 88.087 85.051 2;3 1.0551E-130 101224 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 277.18 261.66 11901000000 1366500000 9026900000 1155600000 0 3100100 3224500 0 3735600 0 18569000 66609000 44643000 3002800 16717000 191890000 61171 771 55037 516306;516307;516308;516309;516310;516311;516312;516313;516314;516315;516316;516317;516318;516319;516320;516321;516322;516323;516324;516325;516326;516327;516328;516329;516330;516331;516332;516333;516334;516335;516336;516337;516338;516339;516340;516341;516342;516343;516344;516345;516346;516347;516348;516349;516350;516351;516352;516353;516354;516355;516356;516357;516358;516359;516360;516361;516362;516363;516364;516365;516366;516367;516368;516369;516370;516371;516372;516373;516374;516375;516376;516377;516378;516379;516380;516381;516382;516383 409784;409785;409786;409787;409788;409789;409790;409791;409792;409793;409794;409795;409796;409797;409798;409799;409800;409801;409802;409803;409804;409805;409806;409807;409808;409809;409810;409811;409812;409813;409814;409815;409816;409817;409818;409819;409820;409821;409822;409823;409824;409825;409826;409827;409828;409829;409830;409831;409832;409833;409834;409835;409836;409837;409838;409839;409840;409841;409842;409843;409844;409845;409846;409847;409848;409849;409850;409851;409852;409853;409854;409855;409856;409857;409858;409859;409860;409861;409862;409863;409864;409865;409866;409867;409868 409795 81 YTPSQQGVAFNSGAK Unmodified 1553.7474 0.74742071 2320 Q13573 SNW1 SNW domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.472 41.65 2 2.9223E-28 45407 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 142.07 87.087 246690000 0 0 0 12537000 14404000 16059000 18329000 16581000 15660000 22989000 26581000 34134000 14340000 19522000 35553000 61172 2320 55038 516384;516385;516386;516387;516388;516389;516390;516391;516392;516393;516394;516395 409869;409870;409871;409872;409873;409874;409875;409876;409877;409878;409879;409880;409881;409882 409873 14 YTPTQQGNMQVLVTYGGDPIPK Oxidation (M) 2422.1839 0.18386096 487 O75369 FLNB Filamin-B yes yes 0 1 0 By MS/MS 2.33 0.471 2 1 3 78.45 74.154 2;3 4.3551E-10 92323 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 75.968 63.342 149730000 0 149730000 0 0 0 0 0 0 0 0 0 0 0 0 0 61173 487 55039 516396;516397;516398 409883;409884;409885 409884 629 3 YTPTQQGNMQVLVTYGGDPIPK Unmodified 2406.1889 0.18894634 487 O75369 FLNB Filamin-B yes yes 0 0 0 By MS/MS 2.33 0.471 2 1 3 85.17 80.904 2;3 4.2673E-20 100525 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 100.94 95.386 315680000 0 315680000 0 0 0 0 0 0 0 0 0 0 0 0 0 61174 487 55039 516399;516400;516401 409886;409887;409888 409886 2 YTPTSPSYSPSSPEYTPTSPK Unmodified 2273.0376 0.037573883 1179 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 8 3.46 2 6 2 1 1 1 1 1 1 57.866 56.648 2;3 7.1654E-09 70406 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.07 100.44 87226000 0 45120000 0 0 0 4041100 0 0 0 4401400 7345100 10204000 0 6122600 9991400 61175 1179 55040 516402;516403;516404;516405;516406;516407;516408;516409 409889;409890;409891;409892;409893;409894 409890 6 YTPVQQGPVGVNVTYGGDPIPK Unmodified 2285.1692 0.16919718 1124 P21333 FLNA Filamin-A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.17 3.33 6 1 23 1 4 2 1 2 2 2 2 2 2 2 2 2 2 2 78.614 77.653 2;3 4.494E-101 89751 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 187.78 180.41 5452800000 31662000 4485700000 12184000 4674900 48614000 64345000 37758000 45624000 47310000 108010000 114330000 117530000 37028000 79166000 218880000 61176 1124 55041 516410;516411;516412;516413;516414;516415;516416;516417;516418;516419;516420;516421;516422;516423;516424;516425;516426;516427;516428;516429;516430;516431;516432;516433;516434;516435;516436;516437;516438;516439 409895;409896;409897;409898;409899;409900;409901;409902;409903;409904;409905;409906;409907;409908;409909;409910;409911;409912;409913 409901 18 YTQPSLPSQAVWSQGPPPPPPYGR Unmodified 2606.2918 0.29177193 1736 P54259 ATN1 Atrophin-1 yes yes 0 0 0 By MS/MS 10 0 1 1 82.431 82.633 3 2.4848E-05 95313 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 40.197 36.603 9616700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9616700 61177 1736 55042 516440 409914 409914 1 YTQQTMEEALGR Unmodified 1425.6558 0.65582851 166 O00534 VWA5A von Willebrand factor A domain-containing protein 5A yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 51.372 52.072 2 0.00086046 58486 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 87.298 68.055 11147000 0 0 0 0 0 0 0 0 0 0 0 6085400 0 0 5061200 61178 166 55043 516441;516442 409915;409916 409916 2 YTQQTMEEALGRVK Unmodified 1652.8192 0.81920545 166 O00534 VWA5A von Willebrand factor A domain-containing protein 5A yes yes 0 0 1 By MS/MS 2 0 1 1 64.938 61.182 3 0.0020023 75949 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 63.181 60.101 10022000 0 0 10022000 0 0 0 0 0 0 0 0 0 0 0 0 61179 166 55044 516443 409917 409917 1 YTQSNSVCYAK Unmodified 1319.5816 0.58160094 1307 P31939 ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.8 3.92 2 3 1 1 1 1 1 22.994 21.423 2 2.6993E-05 22124 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 141.48 133.83 296850000 21952000 239040000 0 0 0 0 0 0 0 0 11043000 0 0 7204200 17609000 61180 1307 55045 516444;516445;516446;516447;516448 409918;409919;409920;409921;409922 409919 5 YTQVGPDHNR Unmodified 1185.5527 0.55268407 2152 Q08211 DHX9 ATP-dependent RNA helicase A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching 10 0 4 1 1 1 1 10.533 10.595 2;3 0.012786 9216 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 79.974 71.754 58040000 0 0 0 27958000 0 29491000 0 0 0 0 0 0 0 0 590990 61181 2152 55046 516449;516450;516451;516452 409923;409924 409924 1 YTSCETGFK Unmodified 1091.4594 0.45936054 1609 P49902 NT5C2 Cytosolic purine 5'-nucleotidase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 6 1 1 1 1 1 1 22.599 23.014 2 0.012192 23654 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 61.679 50.61 24125000 0 0 0 0 0 0 1632300 0 0 0 4272000 4400700 3775500 3084000 6960800 61182 1609 55047 516453;516454;516455;516456;516457;516458 409925;409926;409927 409926 3 YTSIPTSVEESGK Unmodified 1396.6722 0.67219008 4669 Q9NVI1 FANCI Fanconi anemia group I protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 45.86 46.048 2 0.0086065 50650 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 57.225 46.994 98179000 0 0 0 7840100 7647800 0 0 11064000 7937200 0 13306000 18998000 12625000 0 18761000 61183 4669 55048 516459;516460;516461;516462;516463;516464;516465;516466 409928;409929;409930 409928 3 YTSIPTSVEESGKK Unmodified 1524.7672 0.7671531 4669 Q9NVI1 FANCI Fanconi anemia group I protein yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 37.411 37.591 3 0.0075771 40339 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 34.326 25.727 146840000 0 0 0 7099100 11744000 10430000 8955300 12975000 4807300 10333000 11773000 18353000 13473000 19048000 17847000 61184 4669 55049 516467;516468;516469;516470;516471;516472;516473;516474;516475;516476;516477;516478 409931;409932;409933;409934;409935;409936 409933 6 YTSLMLR Unmodified 882.46332 0.4633237 453 O75083 WDR1 WD repeat-containing protein 1 yes yes 0 0 0 By MS/MS By matching By MS/MS 10 0 3 1 1 1 51.161 51.61 2 0.030762 57566 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 74.439 41.081 35256000 0 0 0 0 0 0 0 0 0 0 11720000 13379000 0 10157000 0 61185 453 55050 516479;516480;516481 409937;409938 409938 2 YTSLQEEAQGK Unmodified 1252.5935 0.59354583 5188 Q9Y496 KIF3A Kinesin-like protein KIF3A yes yes 0 0 0 By MS/MS 2 0 1 1 31.151 26.698 2 0.0025129 34816 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.233 88.204 30794000 0 30794000 0 0 0 0 0 0 0 0 0 0 0 0 0 61186 5188 55051 516482 409939 409939 1 YTSQIVGR Unmodified 922.48723 0.48723027 5042 Q9UNS2 COPS3 COP9 signalosome complex subunit 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 24.882 25.085 2 0.0061831 26810 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 119.57 56.852 283060000 0 0 0 20289000 12436000 31851000 14712000 17458000 9783100 30083000 22101000 27844000 24659000 20615000 51232000 61187 5042 55052 516483;516484;516485;516486;516487;516488;516489;516490;516491;516492;516493;516494 409940;409941;409942;409943;409944;409945;409946;409947;409948;409949;409950;409951 409941 10 YTTLIAK Unmodified 808.46945 0.46945494 4880 Q9UGI8 TES Testin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 40.333 35.24 2 0.031008 44120 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 90.986 46.013 598500000 155170000 416310000 27018000 0 0 0 0 0 0 0 0 0 0 0 0 61188 4880 55053 516495;516496;516497 409952 409952 1 YTTPEDATPEPGEDPR Unmodified 1773.7693 0.76933795 1938 P63092;Q5JWF2 GNAS Guanine nucleotide-binding protein G(s) subunit alpha isoforms short;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.103 41.281 2 7.5842E-06 45106 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.324 76.383 172350000 0 0 0 9078600 8666700 14756000 14459000 9896100 9820900 14636000 17731000 23589000 17493000 10322000 21900000 61189 1938 55054 516498;516499;516500;516501;516502;516503;516504;516505;516506;516507;516508;516509 409953;409954;409955;409956;409957;409958;409959;409960;409961;409962;409963;409964 409956 12 YTTPSGEVR Unmodified 1008.4876 0.4876242 1771 P55786;A6NEC2 NPEPPS;NPEPPSL1 Puromycin-sensitive aminopeptidase;Puromycin-sensitive aminopeptidase-like protein yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 22.857 23.063 2 0.0051747 24058 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 81.296 39.794 128620000 0 0 0 13034000 3219800 2248800 3398700 4920600 2379000 5976800 12868000 15422000 7250200 13452000 44452000 61190 1771 55055 516510;516511;516512;516513;516514;516515;516516;516517;516518;516519;516520;516521 409965;409966;409967;409968;409969;409970 409965 6 YTTTQQVVK Unmodified 1066.5659 0.56587452 2775 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 21.381 21.586 2 0.0050696 22676 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 84.568 70.896 89525000 0 0 0 5490700 4982200 9254300 6341800 5000500 4963300 11677000 8364000 6443200 6459000 9843900 10705000 61191 2775 55056 516522;516523;516524;516525;516526;516527;516528;516529;516530;516531;516532;516533 409971;409972;409973;409974;409975;409976;409977;409978;409979;409980;409981;409982 409971 12 YTVENGYSTSAK Unmodified 1318.6041 0.60411052 1234 P28340 POLD1 DNA polymerase delta catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 29.295 29.126 2 2.5314E-08 30699 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 133.23 116.13 259310000 0 55266000 0 13821000 14458000 11704000 14087000 15712000 12122000 16105000 18177000 22254000 16888000 21146000 27569000 61192 1234 55057 516534;516535;516536;516537;516538;516539;516540;516541;516542;516543;516544;516545;516546 409983;409984;409985;409986;409987;409988;409989;409990;409991;409992;409993;409994;409995 409987 12 YTVIYPYTAR Unmodified 1245.6394 0.63937381 10 A1X283 SH3PXD2B SH3 and PX domain-containing protein 2B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 64.658 65.034 2 0.012261 74481 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 72.23 56.859 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 61193 10 55058 516547;516548;516549 409996;409997;409998 409996 3 YTVLAENK Unmodified 936.49165 0.49164694 2200 Q12872 SFSWAP Splicing factor, suppressor of white-apricot homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 29.227 29.581 2 0.0087284 32318 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 85.212 71.15 168220000 0 0 0 0 0 0 2970800 0 0 0 0 160380000 0 4874000 0 61194 2200 55059 516550;516551;516552 409999;410000;410001 409999 3 YTVNFLEAK Unmodified 1083.5601 0.56006086 3190 Q86X55 CARM1 Histone-arginine methyltransferase CARM1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 6.12 3.89 3 1 4 1 2 1 1 1 1 1 72.977 70.646 2 0.0074156 89139 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.815 72.773 457070000 23601000 362390000 11334000 0 0 0 0 7871600 0 11846000 0 0 0 12331000 27696000 61195 3190 55060 516553;516554;516555;516556;516557;516558;516559;516560 410002;410003;410004;410005 410002 4 YTVQINSIGR Unmodified 1149.6142 0.6142217 481 O75342 ALOX12B Arachidonate 12-lipoxygenase, 12R-type yes yes 0 0 0 By MS/MS 10 0 1 1 57.55 56.875 2 0.010972 65566 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 55.064 26.855 8221900 0 0 0 8221900 0 0 0 0 0 0 0 0 0 0 0 61196 481 55061 516561 410006 410006 1 YTWNDVGQLVEK Unmodified 1450.7092 0.70924429 1355 P35573 AGL Glycogen debranching enzyme;4-alpha-glucanotransferase;Amylo-alpha-1,6-glucosidase yes yes 0 0 0 By MS/MS 2 0 1 1 82.802 78.097 2 2.0691E-05 97088 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 108.47 84.947 63913000 0 63913000 0 0 0 0 0 0 0 0 0 0 0 0 0 61197 1355 55062 516562 410007 410007 1 YTYEHDPITK Unmodified 1265.5928 0.59281755 1448 P42224 STAT1 Signal transducer and activator of transcription 1-alpha/beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 5.2 3.92 6 4 2 2 2 1 1 1 1 33.892 31.107 2;3 0.0030867 43277 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 98.033 80.214 322610000 20258000 227760000 50957000 0 0 5916500 2685100 0 0 0 0 7084400 0 0 7951200 61198 1448 55063 516563;516564;516565;516566;516567;516568;516569;516570;516571;516572 410008;410009;410010;410011;410012;410013 410012 5 YTYGVNAWK Unmodified 1100.5291 0.52909508 4862 Q9UBW7 ZMYM2 Zinc finger MYM-type protein 2 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 62.368 55.296 2 0.020558 74251 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 75.109 54.589 23747000 10361000 13386000 0 0 0 0 0 0 0 0 0 0 0 0 0 61199 4862 55064 516573;516574 410014 410014 1 YVAADTLYSQIK Unmodified 1370.7082 0.70818166 2086 Q03001 DST Dystonin yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 68.892 68.921 2 0.0063518 79135 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 51.445 34.774 16788000 0 0 0 0 3612700 0 0 3095100 0 3881700 0 0 3604900 2593400 0 61200 2086 55065 516575;516576;516577;516578;516579 410015;410016;410017 410015 3 YVAEIEK Unmodified 850.44363 0.44363412 219 O14818 PSMA7 Proteasome subunit alpha type-7 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 27.4 26.364 2 0.023384 27185 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 88.029 46.527 3084200000 8035800 2613600000 13967000 39880000 15384000 21243000 21237000 19075000 13505000 0 66808000 68270000 17003000 54643000 111470000 61201 219 55066 516580;516581;516582;516583;516584;516585;516586;516587;516588;516589;516590;516591;516592;516593;516594 410018;410019;410020;410021;410022 410022 5 YVAGETNAK Unmodified 951.46616 0.46616048 4616 Q9NRY5 FAM114A2 Protein FAM114A2 yes yes 0 0 0 By MS/MS 2 0 1 1 9.5077 6.2529 2 0.021764 9028 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 73.665 50.141 13984000 0 13984000 0 0 0 0 0 0 0 0 0 0 0 0 0 61202 4616 55067 516595 410023;410024 410024 2 YVALTSLLK Unmodified 1006.6063 0.60628277 362 O43747 AP1G1 AP-1 complex subunit gamma-1 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.289 82.351 2 0.011616 94809 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.546 43.855 105320000 0 0 0 2859800 2863100 12038000 5617400 6143300 4368900 12696000 6564600 9792000 5006300 11543000 25829000 61203 362 55068 516596;516597;516598;516599;516600;516601;516602;516603;516604;516605;516606;516607 410025;410026;410027;410028;410029;410030 410026 6 YVALVQEK Unmodified 948.52803 0.52803245 1720 P53618 COPB1 Coatomer subunit beta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 38.507 38.687 2 0.0067687 41637 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 97.798 69.624 151750000 0 0 0 8200900 11123000 13407000 11771000 9744500 7373100 13029000 12602000 10048000 16410000 16901000 21136000 61204 1720 55069 516608;516609;516610;516611;516612;516613;516614;516615;516616;516617;516618;516619 410031;410032;410033;410034;410035;410036;410037;410038;410039;410040;410041;410042 410038 12 YVANLFPYK Unmodified 1113.5859 0.58588168 2505 Q15181 PPA1 Inorganic pyrophosphatase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 2 1 1 1 1 1 1 1 1 74.863 74.968 2 0.0054582 85542 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 77.674 0 121380000 0 0 0 1924400 0 0 3827000 0 3046500 0 19651000 19773000 5206300 16642000 51312000 61205 2505 55070 516620;516621;516622;516623;516624;516625;516626;516627;516628;516629 410043;410044;410045;410046;410047;410048;410049;410050;410051 410048 9 YVAQAGLEPLASGDPSASASHAAGITGSR Unmodified 2740.3416 0.34163525 611 O94966 USP19 Ubiquitin carboxyl-terminal hydrolase 19 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 71.186 71.381 3 3.6366E-28 81615 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 78.128 65.932 34046000 0 0 0 0 0 5328100 2784900 2528200 0 5184800 0 6037500 0 4693700 7489000 61206 611 55071 516630;516631;516632;516633;516634;516635;516636 410052;410053;410054;410055;410056;410057 410055 6 YVAQAHDKPR Unmodified 1183.6098 0.60980502 2210 Q12931 TRAP1 Heat shock protein 75 kDa, mitochondrial yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 6.1316 6.234 3 0.0058469 3563 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 59.426 52.538 9970800 0 0 0 5672200 0 0 0 0 0 0 0 0 0 0 4298600 61207 2210 55072 516637;516638;516639 410058;410059;410060 410059 3 YVASYLLAALGGNSSPSAK Unmodified 1867.968 0.96797818 807 P05387 RPLP2 60S acidic ribosomal protein P2 yes yes 0 0 0 By MS/MS 10 0 1 1 90.095 90.234 2 0.0028962 104435 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 51.211 45.239 1809900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1809900 61208 807 55073 516640 410061 410061 1 YVAVELK Unmodified 820.46945 0.46945494 4134 Q9BT09 CNPY3 Protein canopy homolog 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 43.744 44.002 2 0.046674 48899 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 65.803 21.272 121840000 0 0 0 0 6923300 0 13171000 9740900 7642100 10818000 19580000 15328000 11115000 8693900 18823000 61209 4134 55074 516641;516642;516643;516644;516645;516646;516647;516648;516649;516650 410062;410063 410062 2 YVAYIESQGAHR Unmodified 1392.6786 0.67861287 609 O94953 KDM4B Lysine-specific demethylase 4B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 35.555 35.749 3 0.0087275 38141 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 43.897 34.685 48335000 0 0 0 3945000 2628100 5198400 0 3164400 2988800 4032700 3143000 6426100 3396400 2976900 10436000 61210 609 55075 516651;516652;516653;516654;516655;516656;516657;516658;516659;516660;516661 410064;410065;410066 410065 3 YVDDIEK Unmodified 880.41781 0.4178133 2839 Q63ZY3;Q5T7N3 KANK2;KANK4 KN motif and ankyrin repeat domain-containing protein 2;KN motif and ankyrin repeat domain-containing protein 4 yes no 0 0 0 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS By matching By matching By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 23.005 23.211 2 0.03326 23723 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 72.138 37.033 109660000 0 0 0 5915300 5849400 7437100 7255700 4868300 5511500 9924500 10343000 15230000 14420000 8998900 13904000 61211 2839 55076 516662;516663;516664;516665;516666;516667;516668;516669;516670;516671;516672;516673 410067;410068 410067 2 YVDEASKK Unmodified 938.47091 0.4709115 1879 P62249 RPS16 40S ribosomal protein S16 yes yes 0 0 1 By MS/MS 2.5 0.5 1 1 2 5.8121 2.5113 2 0.043091 4516 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.28 70.672 119690000 0 119690000 0 0 0 0 0 0 0 0 0 0 0 0 0 61212 1879 55077 516674;516675 410069 410069 1 YVDEVVR Unmodified 878.44978 0.44978213 1577 P49585 PCYT1A Choline-phosphate cytidylyltransferase A yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 28.225 28.537 2 0.029861 30170 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 75.269 46.37 239300000 0 0 0 0 0 26404000 26565000 0 2049000 42323000 54159000 47954000 0 0 39846000 61213 1577 55078 516676;516677;516678;516679;516680;516681;516682 410070 410070 1 YVDGGISDNLPLYELK Unmodified 1794.904 0.90398093 3736 Q96AD5 PNPLA2 Patatin-like phospholipase domain-containing protein 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 85.558 85.699 2 0.00049717 99481 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 84.169 67.791 28392000 0 0 0 0 0 0 0 0 2469800 4688500 3621300 5140500 2828600 3940100 5702900 61214 3736 55079 516683;516684;516685;516686;516687;516688;516689 410071;410072;410073;410074;410075;410076;410077;410078 410078 8 YVDIAIPCNNK Unmodified 1305.6387 0.63872189 875 P08865 RPSA 40S ribosomal protein SA yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 61.544 61.637 2 0.00061885 71244 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 93.467 79.561 135580000 0 0 0 5851100 2831700 3917500 4602300 0 3654900 4173800 17097000 19506000 8124400 23999000 41820000 61215 875 55080 516690;516691;516692;516693;516694;516695;516696;516697;516698;516699;516700 410079;410080;410081;410082;410083;410084;410085 410084 7 YVDPVISK Unmodified 919.50148 0.50148335 2398 Q14244 MAP7 Ensconsin yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 42.703 38.296 2 0.045449 49569 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 68.383 22.501 405060000 0 400460000 4597400 0 0 0 0 0 0 0 0 0 0 0 0 61216 2398 55081 516701;516702 410086 410086 1 YVDTPFGK Unmodified 925.45453 0.45453316 2237 Q13126 MTAP S-methyl-5'-thioadenosine phosphorylase yes yes 0 0 0 By matching By MS/MS By MS/MS 2 0 3 1 1 1 49.841 43.991 2 0.01658 57607 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 91.906 77.92 572640000 3420000 543680000 25538000 0 0 0 0 0 0 0 0 0 0 0 0 61217 2237 55082 516703;516704;516705 410087;410088;410089;410090 410089 4 YVDTPFGKPSDALILGK Unmodified 1819.972 0.97200092 2237 Q13126 MTAP S-methyl-5'-thioadenosine phosphorylase yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 85.082 81.456 3 0.019295 101642 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 33.308 22.253 39406000 0 32470000 6936700 0 0 0 0 0 0 0 0 0 0 0 0 61218 2237 55083 516706;516707 410091;410092 410091 2 YVDVLNPSGTQR Unmodified 1347.6783 0.67827852 242 O15027 SEC16A Protein transport protein Sec16A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 52.996 53.082 2 0.00016797 61160 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 99.653 80.873 272550000 0 0 0 9590900 9981500 40335000 20071000 15522000 0 24906000 28036000 0 37958000 34832000 51320000 61219 242 55084 516708;516709;516710;516711;516712;516713;516714;516715;516716;516717;516718 410093;410094;410095;410096;410097;410098;410099;410100;410101 410100 9 YVECSALTQK Unmodified 1197.57 0.56997362 1821 P60953 CDC42 Cell division control protein 42 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.06 3.36 3 1 12 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 33.159 32.097 2 0.0013971 35315 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 105.52 83.284 1686200000 28726000 1054200000 3824400 25843000 21731000 22102000 33813000 40916000 33199000 48632000 102360000 83987000 54614000 38009000 94319000 61220 1821 55085 516719;516720;516721;516722;516723;516724;516725;516726;516727;516728;516729;516730;516731;516732;516733;516734 410102;410103;410104;410105;410106;410107;410108;410109;410110;410111;410112;410113;410114;410115;410116 410110 14 YVENPSQVLNCER Unmodified 1606.741 0.74095513 533 O75694 NUP155 Nuclear pore complex protein Nup155 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 57.312 57.923 2 4.181E-12 64962 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 118.4 100.14 8499400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8499400 61221 533 55086 516735;516736;516737;516738 410117;410118;410119;410120 410119 4 YVEQSNLMMEK Oxidation (M) 1386.6159 0.61593753 2768 Q5T1M5 FKBP15 FK506-binding protein 15 yes yes 0 1 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching 10 0 7 1 1 1 1 1 1 1 39.303 39.761 2 0.0041467 43206 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 56.916 37.812 24407000 0 0 0 0 0 0 0 0 0 3753400 4381700 5145400 3420100 3502600 4204100 61222 2768 55087 516739;516740;516741;516742;516743;516744;516745 410121;410122;410123;410124 410123 4399;4400 4 YVEQSNLMMEK Unmodified 1370.621 0.62102291 2768 Q5T1M5 FKBP15 FK506-binding protein 15 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS 10 0 4 1 1 1 1 47.859 48.25 2 0.001766 53337 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 70.816 58.005 30613000 0 0 0 0 0 0 0 0 0 4317700 6350400 0 0 5558000 14386000 61223 2768 55087 516746;516747;516748;516749 410125;410126 410125 2 YVEQSNLMMEK 2 Oxidation (M) 1402.6109 0.61085216 2768 Q5T1M5 FKBP15 FK506-binding protein 15 yes yes 0 2 0 By MS/MS By MS/MS 10 0 2 1 1 25.606 26.02 2 0.005881 27629 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 43.635 31.108 7462400 0 0 0 0 0 0 0 0 0 0 3188600 0 4273800 0 0 61224 2768 55087 516750;516751 410127 410127 4399;4400 1 YVEVFFPQFK Unmodified 1302.6649 0.66486028 526 O75635 SERPINB7 Serpin B7 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 88.708 88.636 2 0.026327 103109 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 54.157 25.07 5120500 0 0 0 1447500 0 0 0 3673000 0 0 0 0 0 0 0 61225 526 55088 516752;516753 410128;410129 410129 2 YVEVSPATER Unmodified 1149.5666 0.5666028 4639 Q9NTZ6 RBM12 RNA-binding protein 12 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 32.436 32.62 2 0.00088144 34471 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 118.18 76.748 97950000 0 0 0 9303300 9957500 0 11895000 0 6152700 0 17333000 16718000 0 0 26590000 61226 4639 55089 516754;516755;516756;516757;516758;516759;516760;516761;516762;516763;516764;516765 410130;410131;410132;410133;410134;410135;410136;410137;410138;410139;410140;410141 410133 12 YVFCPETTDDEK Unmodified 1502.6235 0.62352533 4933 Q9UJ41 RABGEF1 Rab5 GDP/GTP exchange factor yes yes 0 0 0 By MS/MS 2 0 1 1 54.874 49.069 2 0.00032829 63294 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 107.24 100.86 31462000 0 31462000 0 0 0 0 0 0 0 0 0 0 0 0 0 61227 4933 55090 516766 410142 410142 1 YVFLDPLAGAVTK Unmodified 1392.7653 0.76530261 44;4563 C4AMC7;Q6VEQ5;A8K0Z3;A8MWX3;Q9NQA3 WASH3P;WASH2P;WASH1;WASH4P;WASH6P Putative WAS protein family homolog 3;WAS protein family homolog 2;WAS protein family homolog 1;Putative WAS protein family homolog 4;WAS protein family homolog 6 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 90.234 89.066 2 0.0024736 103072 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 69.979 50.193 108720000 6679500 56578000 3071200 0 1457800 4281600 2652500 2267900 1840900 5441900 4106900 4761000 2551600 3126500 9904400 61228 44;4563 55091 516767;516768;516769;516770;516771;516772;516773;516774;516775;516776;516777;516778;516779;516780;516781 410143;410144;410145;410146;410147;410148;410149;410150;410151;410152;410153;410154;410155;410156;410157;410158;410159 410148 16 YVFSNFTAVPK Unmodified 1271.655 0.65502388 1602 P49815 TSC2 Tuberin yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By matching By MS/MS 10 0 7 1 1 1 1 1 1 1 77.725 77.815 2 0.025298 89119 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 40.724 26.05 36217000 0 0 0 0 3013500 0 3204500 0 3142000 4717800 6126100 10791000 0 5221900 0 61229 1602 55092 516782;516783;516784;516785;516786;516787;516788 410160 410160 1 YVGAVQMLK Unmodified 1007.5474 0.54738768 3517 Q8TEQ0 SNX29 Sorting nexin-29 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.011 56.136 2 0.021281 63521 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 52.403 33.672 66546000 0 0 0 3181300 3194400 3194600 5459500 5623500 3225000 5470700 6992200 8674500 7295700 4882600 9351800 61230 3517 55093 516789;516790;516791;516792;516793;516794;516795;516796;516797;516798;516799;516800 410161;410162 410161 2 YVGESEANIRK Unmodified 1264.6412 0.64116473 1504 P46459 NSF Vesicle-fusing ATPase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 22.235 22.399 3 0.0028634 22903 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 39.785 24.909 49889000 0 0 0 3940700 2903500 3999700 2704700 4714500 3814900 5864700 7342600 0 3604400 4897000 6102200 61231 1504 55094 516801;516802;516803;516804;516805;516806;516807;516808;516809;516810;516811 410163;410164;410165;410166;410167;410168;410169 410165 7 YVGETQPTGQIK Unmodified 1319.6721 0.67213051 5180 Q9Y3Z3 SAMHD1 Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 31.751 31.557 2 0.00010104 34041 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 102.62 88.415 105840000 0 51769000 0 2943300 2904200 6404900 3298900 2978400 3612700 4882800 6039600 9014200 3562100 3601900 4827900 61232 5180 55095 516812;516813;516814;516815;516816;516817;516818;516819;516820;516821;516822;516823;516824 410170;410171;410172;410173;410174;410175;410176;410177;410178;410179 410178 9 YVGFDSWDK Unmodified 1115.4924 0.49237523 5198 Q9Y4E8 USP15 Ubiquitin carboxyl-terminal hydrolase 15 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 65.714 65.94 2 0.016214 75446 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 56.729 46.315 36004000 0 0 0 0 0 2928500 1781900 0 1772500 2922000 4633200 3839300 3356700 4902800 9867100 61233 5198 55096 516825;516826;516827;516828;516829;516830;516831;516832;516833 410180;410181;410182;410183;410184;410185 410185 6 YVGFGNTPPPQK Unmodified 1303.6561 0.65608651 3362 Q8N6T3 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 45.008 45.179 2 0.00079665 51182 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 74.376 62.773 310750000 0 0 0 15257000 16987000 18049000 25324000 22933000 20978000 23880000 37092000 33636000 28741000 28261000 39615000 61234 3362 55097 516834;516835;516836;516837;516838;516839;516840;516841;516842;516843;516844;516845 410186;410187;410188;410189;410190;410191;410192;410193;410194;410195;410196;410197 410196 12 YVGFGNTPPPQKK Unmodified 1431.751 0.75104953 3362 Q8N6T3 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 35.089 35.218 3 0.0038492 38119 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 34.898 28.751 35058000 0 0 0 5787800 3698900 0 0 8487600 0 0 5399100 6014300 0 5670300 0 61235 3362 55098 516846;516847;516848;516849;516850;516851 410198;410199;410200 410199 3 YVGVSSDSVGGFR Unmodified 1328.6361 0.63607935 2428 Q14677 CLINT1 Clathrin interactor 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.727 56.847 2 6.2635E-13 64481 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 163.64 151.11 573770000 0 0 0 47877000 39202000 33951000 50841000 38179000 39855000 43672000 69036000 61581000 37880000 53689000 58006000 61236 2428 55099 516852;516853;516854;516855;516856;516857;516858;516859;516860;516861;516862;516863 410201;410202;410203;410204;410205;410206;410207;410208;410209;410210;410211;410212 410205 10 YVGWTMHDK Oxidation (M) 1151.507 0.50697943 3326 Q8N3U4 STAG2 Cohesin subunit SA-2 yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 32.842 28.108 3 0.028396 35489 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 45.022 37.135 67955000 53492000 0 14463000 0 0 0 0 0 0 0 0 0 0 0 0 61237 3326 55100 516864;516865 410213;410214 410214 1 YVHADAPTNK Unmodified 1114.5407 0.5407224 3687 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11.388 10.856 2 5.7772E-06 13551 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 128 95.64 212320000 30677000 119380000 24432000 2243500 2012800 3549900 1955600 2199300 2190200 4004100 4114700 4513300 4300300 4050600 2697800 61238 3687 55101 516866;516867;516868;516869;516870;516871;516872;516873;516874;516875;516876;516877;516878;516879;516880 410215;410216;410217;410218;410219;410220;410221;410222;410223;410224;410225;410226;410227;410228;410229;410230 410224 16 YVIHTVGPIAYGEPSASQAAELR Unmodified 2428.2387 0.23867373 4088 Q9BQ69 MACROD1 O-acetyl-ADP-ribose deacetylase MACROD1 yes yes 0 0 0 By MS/MS By matching 10 0 2 1 1 76.846 77.038 3 0.00022384 88939 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 37.817 33.561 13088000 0 0 0 0 0 0 0 0 0 4300100 0 0 0 0 8788200 61239 4088 55102 516881;516882 410231 410231 1 YVIVSSK Unmodified 794.4538 0.45380487 455 O75116 ROCK2 Rho-associated protein kinase 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.33 2.21 1 11 1 1 1 1 1 1 1 1 1 1 1 1 27.796 27.611 2 0.034911 34480 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 84.699 60.727 194440000 0 127770000 0 3070500 2656300 6206400 4098400 3882000 0 8500900 7872300 9230100 5298300 5901800 9955800 61240 455 55103 516883;516884;516885;516886;516887;516888;516889;516890;516891;516892;516893;516894 410232;410233 410232 2 YVIYIER Unmodified 954.51747 0.51746776 1843 P61254;Q9UNX3 RPL26;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 59.758 60.007 2 0.02229 68431 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 105.2 73.622 860180000 0 0 0 0 0 86353000 71807000 56034000 68747000 109610000 80783000 118130000 83897000 79850000 104970000 61241 1843 55104 516895;516896;516897;516898;516899;516900;516901;516902;516903;516904 410234;410235;410236;410237;410238;410239;410240;410241 410235 8 YVLALVK Unmodified 804.51093 0.51092582 2786 Q5T8P6 RBM26 RNA-binding protein 26 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.86 2.8 2 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68.128 67.385 2 0.033387 75876 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.021 31.918 470160000 74230000 0 14842000 20532000 23092000 36692000 31388000 26707000 27668000 35741000 35750000 42333000 30214000 27742000 43227000 61242 2786 55105 516905;516906;516907;516908;516909;516910;516911;516912;516913;516914;516915;516916;516917;516918 410242;410243 410242 2 YVLDDLIVAK Unmodified 1147.6489 0.64887587 419 O60645 EXOC3 Exocyst complex component 3 yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 82.026 82.087 2 0.011327 94908 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 54.436 37.041 71910000 0 0 0 521500 3698100 5833400 4333300 7510700 3762100 9210200 7580900 5989400 4275900 5501200 13693000 61243 419 55106 516919;516920;516921;516922;516923;516924;516925;516926;516927;516928;516929;516930 410244;410245;410246;410247;410248;410249;410250;410251;410252 410245 9 YVLEQPYSR Unmodified 1153.5768 0.57677356 4998 Q9ULK4 MED23 Mediator of RNA polymerase II transcription subunit 23 yes yes 0 0 0 By MS/MS By MS/MS 10 0 2 1 1 46.849 47.586 2 0.013982 52626 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 58.981 34.087 6830900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6830900 61244 4998 55107 516931;516932 410253;410254 410253 2 YVLGDTAMQK Unmodified 1124.5536 0.55359527 3 A0AVT1 UBA6 Ubiquitin-like modifier-activating enzyme 6 yes yes 0 0 0 By matching By MS/MS 10 0 2 1 1 44.778 45.373 2 0.0055824 49834 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 68.371 44.847 14496000 0 0 0 0 0 0 0 0 0 0 4122100 0 0 0 10374000 61245 3 55108 516933;516934 410255 410255 1 YVLGMQELFR Oxidation (M) 1270.638 0.63799361 3887 Q96J01 THOC3 THO complex subunit 3 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 75.478 75.537 2 0.003952 87102 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 66.692 66.692 80362000 0 0 0 2808600 4155900 6863600 3798600 4643800 7392600 7171600 8838700 8012500 7215200 6923000 12537000 61246 3887 55109 516935;516936;516937;516938;516939;516940;516941;516942;516943;516944;516945;516946 410256;410257;410258;410259;410260;410261;410262;410263;410264;410265 410260 5390 10 YVLHCQGTEEEK Unmodified 1491.6664 0.6663932 1902 P62495 ETF1 Eukaryotic peptide chain release factor subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.85 2.74 2 1 17 2 1 1 1 2 1 1 2 1 2 2 2 2 22.173 21.834 2;3 7.4913E-67 21481 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 195.27 165.5 842100000 0 34808000 7611500 34644000 27774000 88688000 0 27549000 34318000 98461000 55818000 120750000 71247000 54289000 186140000 61247 1902 55110 516947;516948;516949;516950;516951;516952;516953;516954;516955;516956;516957;516958;516959;516960;516961;516962;516963;516964;516965;516966 410266;410267;410268;410269;410270;410271;410272;410273;410274;410275;410276;410277;410278;410279;410280;410281 410269 12 YVLNFLEVHDK Unmodified 1375.7136 0.71360139 2165 Q08AF3 SLFN5 Schlafen family member 5 yes yes 0 0 0 By matching By MS/MS By matching By MS/MS By matching By matching By matching By matching By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 78.967 79.046 3 0.010484 91328 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 35.677 31.617 40274000 0 0 0 677850 0 5156200 0 3156400 4702500 3554500 2988100 4798800 2974800 0 12265000 61248 2165 55111 516967;516968;516969;516970;516971;516972;516973;516974;516975 410282 410282 1 YVLQDAR Unmodified 863.45012 0.45011648 3926 Q96MU7 YTHDC1 YTH domain-containing protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 28.429 28.624 2 0.050331 29856 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 62.717 22.031 81781000 0 0 0 8102700 4393200 5473000 6103700 5064100 4750100 9221700 7199700 8635200 9930400 4865000 8042200 61249 3926 55112 516976;516977;516978;516979;516980;516981;516982;516983;516984;516985;516986;516987 410283 410283 1 YVLSINEEGLRR Unmodified 1447.7783 0.77832691 3609 Q92503 SEC14L1 SEC14-like protein 1 yes yes 0 0 1 By MS/MS By MS/MS 10 0 2 1 1 62.687 62.858 3 0.0033393 71594 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 46.592 42.094 14772000 0 0 0 0 0 0 0 8967300 5805100 0 0 0 0 0 0 61250 3609 55113 516988;516989 410284;410285 410284 2 YVMDVEEITPAIVEAFVNDFLAEK Oxidation (M) 2757.3459 0.34590049 2872 Q6DKJ4 NXN Nucleoredoxin yes yes 0 1 0 By MS/MS By MS/MS 2 0 2 1 1 106.42 99.979 3 1.2515E-20 125972 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 99.93 93.281 10651000 6004400 4647000 0 0 0 0 0 0 0 0 0 0 0 0 0 61251 2872 55114 516990;516991 410286;410287 410287 4518 2 YVMDVEEITPAIVEAFVNDFLAEK Unmodified 2741.351 0.35098587 2872 Q6DKJ4 NXN Nucleoredoxin yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 106.72 101.2 3 6.4985E-39 126534 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 117.64 111.2 18639000 12011000 6628200 0 0 0 0 0 0 0 0 0 0 0 0 0 61252 2872 55114 516992;516993;516994 410288;410289;410290 410290 3 YVMGNNPADLLAVDSR Oxidation (M) 1749.8356 0.83558379 2075 Q02413 DSG1 Desmoglein-1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 76.045 76.107 2 5.5796E-85 88065 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 190.46 181.14 1008400000 0 0 0 148360000 67431000 71586000 54894000 199190000 45568000 79169000 86550000 102320000 68428000 40222000 44647000 61253 2075 55115 516995;516996;516997;516998;516999;517000;517001;517002;517003;517004;517005;517006 410291;410292;410293;410294;410295;410296;410297;410298;410299;410300;410301;410302 410301 3380 12 YVMGNNPADLLAVDSR Unmodified 1733.8407 0.84066917 2075 Q02413 DSG1 Desmoglein-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 21 2 1 2 1 2 1 2 2 2 2 2 2 82.169 82.234 2;3 1.32E-19 94966 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 124.86 115.9 364350000 0 0 0 28078000 13935000 22239000 7995600 103140000 9884400 31007000 29872000 42616000 20334000 25907000 29341000 61254 2075 55115 517007;517008;517009;517010;517011;517012;517013;517014;517015;517016;517017;517018;517019;517020;517021;517022;517023;517024;517025;517026;517027 410303;410304;410305;410306;410307;410308;410309;410310;410311;410312;410313;410314;410315;410316;410317;410318 410310 13 YVMLPVADQDQCIR Oxidation (M) 1722.8069 0.8069262 735 P00738 HP Haptoglobin;Haptoglobin alpha chain;Haptoglobin beta chain yes yes 0 1 0 By MS/MS 10 0 1 1 69.656 69.008 2 2.9001E-05 79879 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 84.658 74.135 4260100 0 0 0 4260100 0 0 0 0 0 0 0 0 0 0 0 61255 735 55116 517028 410319;410320 410320 895 2 YVMTTTTLER Unmodified 1213.6013 0.60127375 804 P05198 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 49.609 49.771 2 0.0019157 56039 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 99.802 68.43 89310000 0 0 0 0 10564000 9450900 10028000 0 0 9905100 21233000 0 0 10882000 17248000 61256 804 55117 517029;517030;517031;517032;517033;517034;517035;517036 410321;410322;410323;410324;410325;410326;410327;410328 410325 8 YVMTTTTLER Oxidation (M) 1229.5962 0.59618837 804 P05198 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 33.553 33.785 2 0.0064874 36698 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 57.047 39.062 28735000 0 0 0 0 3246100 0 0 2512500 0 3433800 8050700 8960900 0 2530400 0 61257 804 55117 517037;517038;517039;517040;517041;517042 410329;410330;410331 410329 967 3 YVNGSTYQR Unmodified 1086.5094 0.50942227 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 15.335 15.506 2 0.0032251 14131 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 129.47 110.74 111870000 0 0 0 2796400 3006700 4219600 6588000 5727300 3779400 8357300 14355000 17895000 13268000 14345000 17530000 61258 2930 55118 517043;517044;517045;517046;517047;517048;517049;517050;517051;517052;517053;517054 410332;410333;410334;410335;410336;410337;410338;410339;410340 410337 7 YVPGSSGSSNTLPTADPFTGAGR Unmodified 2238.0553 0.055289633 5085 Q9Y263 PLAA Phospholipase A-2-activating protein yes yes 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 1 2 2 2 2 2 1 2 2 2 2 75.286 75.357 2;3 2.5261E-14 86465 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 77.562 69.257 266780000 0 0 0 10690000 4400400 25097000 20413000 14386000 11940000 29115000 14950000 32521000 16514000 25835000 60920000 61259 5085 55119 517055;517056;517057;517058;517059;517060;517061;517062;517063;517064;517065;517066;517067;517068;517069;517070;517071;517072;517073;517074;517075;517076 410341;410342;410343;410344;410345;410346;410347;410348;410349;410350;410351;410352;410353 410343 12 YVPLVTGLASAR Unmodified 1245.7081 0.70812208 2955 Q6PIJ6 FBXO38 F-box only protein 38 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 77.112 77.338 2 0.011198 89416 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 45.598 32.144 16415000 0 0 0 0 0 0 0 3493700 0 0 6224000 0 0 0 6696900 61260 2955 55120 517077;517078;517079 410354;410355 410355 2 YVPPAAGRYTIK Unmodified 1334.7347 0.73467118 487 O75369 FLNB Filamin-B yes yes 0 0 1 By MS/MS 2 0 1 1 55.212 47.103 3 0.018781 64452 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 35.204 26.474 26895000 26895000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 61261 487 55121 517080 410356;410357 410356 2 YVPPHLSPDK Unmodified 1151.5975 0.597509 3179 Q86W56 PARG Poly(ADP-ribose) glycohydrolase yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 42.174 36.936 3 0.010285 46469 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 57.348 44.772 43950000 25164000 0 18785000 0 0 0 0 0 0 0 0 0 0 0 0 61262 3179 55122 517081;517082 410358;410359;410360;410361 410361 4 YVPPHLSPDKK Unmodified 1279.6925 0.69247202 3179 Q86W56 PARG Poly(ADP-ribose) glycohydrolase yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 35.136 30.268 3 0.016771 42396 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 45.915 27.291 16922000 14515000 0 2407300 0 0 0 0 0 0 0 0 0 0 0 0 61263 3179 55123 517083;517084 410362 410362 1 YVPVSCEK Unmodified 980.46372 0.46371763 4199 Q9BW19 KIFC1 Kinesin-like protein KIFC1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 21.104 21.36 2 0.033141 22057 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 53.891 39.115 46674000 0 0 0 3282900 0 3662100 3967900 0 2919200 4513700 5154100 6858400 5028200 5450200 5837100 61264 4199 55124 517085;517086;517087;517088;517089;517090;517091;517092;517093;517094 410363;410364 410364 2 YVQDNIQLHGQQVAR Unmodified 1767.9016 0.90162994 4844 Q9UBK8 MTRR Methionine synthase reductase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 43.616 43.794 3 7.7685E-10 47974 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 92.468 86.688 186030000 0 0 0 7912800 5676100 32710000 10644000 0 0 24710000 18441000 21552000 9454200 16646000 38286000 61265 4844 55125 517095;517096;517097;517098;517099;517100;517101;517102;517103;517104 410365;410366;410367;410368;410369;410370;410371;410372;410373;410374;410375;410376;410377;410378;410379 410370 15 YVQELAAVR Unmodified 1047.5713 0.57129425 2459 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 46.969 47.039 2 0.0040478 51905 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 98.299 71.162 83943000 0 0 0 3885000 6691600 8321200 8491100 0 6268600 13593000 0 0 11610000 10382000 14700000 61266 2459 55126 517105;517106;517107;517108;517109;517110;517111;517112;517113 410380;410381;410382 410381 2 YVQLPADEVDTQLLQDAAR Unmodified 2144.075 0.074962442 5137 Q9Y333 LSM2 U6 snRNA-associated Sm-like protein LSm2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 20 2 1 2 2 2 2 2 2 1 2 2 85.924 86.036 2;3 1.6922E-38 99897 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 130.07 122.16 118190000 0 0 0 0 3811400 2727500 3002200 5792800 5964200 12598000 18147000 17146000 2985700 9693500 36317000 61267 5137 55127 517114;517115;517116;517117;517118;517119;517120;517121;517122;517123;517124;517125;517126;517127;517128;517129;517130;517131;517132;517133 410383;410384;410385;410386;410387;410388;410389;410390;410391;410392;410393;410394;410395;410396 410394 13 YVQLPADEVDTQLLQDAARK Unmodified 2272.1699 0.16992546 5137 Q9Y333 LSM2 U6 snRNA-associated Sm-like protein LSm2 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 81.991 82.052 3 5.2878E-38 94630 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 110.41 107.22 232570000 0 0 0 1838300 5254500 11378000 4476400 14093000 8569500 21350000 25447000 27471000 5218100 15029000 92442000 61268 5137 55128 517134;517135;517136;517137;517138;517139;517140;517141;517142;517143;517144;517145 410397;410398;410399;410400;410401;410402;410403;410404;410405;410406;410407;410408 410400 12 YVQMREEASDLLLNK Unmodified 1807.9138 0.91383411 2215 Q12965 MYO1E Unconventional myosin-Ie yes yes 0 0 1 By MS/MS By MS/MS 2 0 2 1 1 78.538 72.085 3 1.2623E-06 91649 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.42 71.78 124880000 79507000 45373000 0 0 0 0 0 0 0 0 0 0 0 0 0 61269 2215 55129 517146;517147 410409;410410;410411 410409 3 YVQMREEASDLLLNK Oxidation (M) 1823.9087 0.90874874 2215 Q12965 MYO1E Unconventional myosin-Ie yes yes 0 1 1 By MS/MS By MS/MS 2 0 2 1 1 63.008 56.971 3 0.0062279 76610 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 46.797 34.879 36574000 23429000 0 13145000 0 0 0 0 0 0 0 0 0 0 0 0 61270 2215 55129 517148;517149 410412;410413 410412 3606 1 YVQPPEMIGPMRPEQFSDEVEPATPEEGEPATQR 2 Oxidation (M) 3872.7509 0.75093405 577 Q4V326;Q13065;P0CL82;P0CL81;P0CL80;O76087 GAGE2E;GAGE1;GAGE12I;GAGE12G;GAGE12F;GAGE7 G antigen 2E;G antigen 1;G antigen 12I;G antigen 12G;G antigen 12F;G antigen 7 yes no 0 2 1 By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 73.698 73.925 3 2.242E-20 84379 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 49.968 44.963 49070000 0 0 0 0 0 0 0 0 3132300 0 7811900 9303300 0 6680500 22142000 61271 577 55130 517150;517151;517152;517153;517154 410414;410415;410416;410417 410416 731;732 4 YVRGLLQTEPQNNQAK Unmodified 1857.9697 0.96970951 5161 Q9Y3D6 FIS1 Mitochondrial fission 1 protein yes yes 0 0 1 By MS/MS 2 0 1 1 52.304 44.29 3 0.00015355 60932 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 73.022 51.564 19455000 19455000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 61272 5161 55131 517155 410418 410418 1 YVRPFLNSISK Unmodified 1322.7347 0.73467118 129 O00231 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 13 1 2 1 2 1 2 1 1 2 57.358 57.564 2;3 1.3504E-05 65491 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 106.38 96.07 425570000 0 0 0 13619000 0 63260000 0 14677000 0 61890000 29782000 208270000 14545000 0 19523000 61273 129 55132 517156;517157;517158;517159;517160;517161;517162;517163;517164;517165;517166;517167;517168 410419;410420;410421;410422;410423;410424;410425;410426;410427;410428;410429;410430;410431;410432;410433;410434;410435;410436;410437 410424 18 YVSAQPLAGR Unmodified 1060.5665 0.56654322 4126 Q9BSJ2 TUBGCP2 Gamma-tubulin complex component 2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 13 1 1 1 2 1 1 1 1 1 1 1 1 34.647 34.819 2 0.0019883 38169 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 87.181 53.824 166350000 0 0 0 7900700 9068200 17805000 13844000 13191000 5272600 17384000 14548000 16520000 16011000 9747100 25059000 61274 4126 55133 517169;517170;517171;517172;517173;517174;517175;517176;517177;517178;517179;517180;517181 410438;410439;410440;410441;410442;410443;410444;410445;410446;410447;410448 410439 10 YVSDRPQAFK Unmodified 1209.6142 0.6142217 5277 Q9Y6D6 ARFGEF1 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 yes yes 0 0 1 By MS/MS 2 0 1 1 34.174 27.942 2 0.043494 39243 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 85.862 57.688 20420000 20420000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 61275 5277 55134 517182 410449 410449 1 YVSHGATGK Unmodified 918.45593 0.45593014 737 P00966 ASS1 Argininosuccinate synthase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.14 0.35 6 1 2 3 2 2.7226 -0.23287 1;2 0.0011357 2684 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 134.48 119.81 3575400000 3538600000 26352000 10451000 0 0 0 0 0 0 0 0 0 0 0 0 61276 737 55135 517183;517184;517185;517186;517187;517188;517189 410450;410451;410452;410453;410454;410455;410456;410457;410458;410459;410460;410461;410462 410454 13 YVSLHVR Unmodified 872.48684 0.48683634 1435 P41227;Q9BSU3 NAA10;NAA11 N-alpha-acetyltransferase 10;N-alpha-acetyltransferase 11 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 8 1 1 1 1 1 1 1 1 31.227 31.475 2 0.023928 33195 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 94.401 56.199 1114100000 0 0 0 0 0 10093000 60569000 93505000 82917000 165940000 209680000 486920000 0 4495800 0 61277 1435 55136 517190;517191;517192;517193;517194;517195;517196;517197 410463;410464;410465;410466 410466 2 YVSLHVRK Unmodified 1000.5818 0.58179936 1435 P41227;Q9BSU3 NAA10;NAA11 N-alpha-acetyltransferase 10;N-alpha-acetyltransferase 11 yes no 0 0 1 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 19.965 20.399 2 0.015583 20819 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 121.29 91.954 110410000 0 0 0 0 0 0 0 0 0 23081000 43194000 44138000 0 0 0 61278 1435 55137 517198;517199;517200 410467;410468;410469 410468 0 YVSPQDVTTMQTCNTK Unmodified 1871.8393 0.83934854 4330 Q9H0J9 PARP12 Poly [ADP-ribose] polymerase 12 yes yes 0 0 0 By MS/MS 2 0 1 1 55.075 49.269 2 0.00046141 63842 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 92.925 78.767 9725900 0 9725900 0 0 0 0 0 0 0 0 0 0 0 0 0 61279 4330 55138 517201 410470 410470 1 YVSQYYPK Unmodified 1046.5073 0.50729701 2757 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 35.706 36.048 2 0.044749 38665 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 48.787 33.155 24784000 0 0 0 0 0 0 2320900 0 0 6330800 4081500 0 3939000 3121900 4989600 61280 2757 55139 517202;517203;517204;517205;517206;517207 410471 410471 1 YVSSLTEEISK Unmodified 1254.6343 0.63434802 1563 P49257 LMAN1 Protein ERGIC-53 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 54.671 54.802 2 0.00043138 61555 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 85.533 61.765 342680000 0 0 0 13669000 17475000 29887000 28282000 21394000 18600000 32936000 29593000 44599000 33127000 23218000 49894000 61281 1563 55140 517208;517209;517210;517211;517212;517213;517214;517215;517216;517217;517218;517219 410472;410473;410474;410475;410476;410477;410478;410479;410480;410481;410482;410483;410484;410485;410486;410487;410488 410485 17 YVSVCEGPLK Unmodified 1150.5692 0.56924534 25 A6NDU8 C5orf51 UPF0600 protein C5orf51 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 4.25 3.34 2 1 1 1 2 1 54.656 48.375 2 0.0015463 63298 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.41 94.205 226300000 4983200 221320000 0 0 0 0 0 0 0 0 0 0 0 0 0 61282 25 55141 517220;517221;517222;517223 410489;410490;410491;410492 410489 3 YVTDVGVLQR Unmodified 1148.619 0.61897272 496 O75419 CDC45 Cell division control protein 45 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 56.297 56.423 2 0.0014968 64188 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 90.709 53.867 164690000 0 0 0 7289500 9937800 14894000 8310900 14285000 8637200 12509000 18175000 19605000 15531000 14739000 20780000 61283 496 55142 517224;517225;517226;517227;517228;517229;517230;517231;517232;517233;517234;517235 410493;410494;410495;410496;410497;410498;410499;410500;410501;410502 410499 10 YVTGAQRLEEAQK Unmodified 1491.7682 0.76815616 311 O43264 ZW10 Centromere/kinetochore protein zw10 homolog yes yes 0 0 1 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 36.24 31.344 3 9.9923E-07 43449 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 81.278 69.358 261690000 199250000 37714000 24720000 0 0 0 0 0 0 0 0 0 0 0 0 61284 311 55143 517236;517237;517238 410503;410504;410505;410506;410507 410505 4 YVTSAPMPEPQAPGR Oxidation (M) 1615.7664 0.7664416 750 P01871 IGHM Ig mu chain C region yes yes 0 1 0 By MS/MS 10 0 2 2 42.324 42.491 2 2.6719E-06 47097 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 83.397 69.969 18746000 0 0 0 0 0 0 0 18746000 0 0 0 0 0 0 0 61285 750 55144 517239;517240 410508;410509 410508 906 2 YVTSAPMPEPQAPGR Unmodified 1599.7715 0.77152697 750 P01871 IGHM Ig mu chain C region yes yes 0 0 0 By MS/MS 10 0 1 1 54.677 54.843 2 1.4697E-05 62160 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 78.653 66.787 14498000 0 0 0 0 0 0 0 14498000 0 0 0 0 0 0 0 61286 750 55144 517241 410510 410510 1 YVTTILDDAK Unmodified 1137.5918 0.59175492 2616 Q16594;Q9HBM6 TAF9;TAF9B Transcription initiation factor TFIID subunit 9;Transcription initiation factor TFIID subunit 9B yes no 0 0 0 By matching By matching By matching By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 59.73 59.838 2 0.011299 67291 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 66.568 51.417 105050000 0 0 0 4952900 5867700 7619000 8219200 11005000 4747800 9529900 10160000 13076000 9643200 6783200 13449000 61287 2616 55145 517242;517243;517244;517245;517246;517247;517248;517249;517250;517251;517252;517253 410511;410512;410513;410514;410515;410516 410515 3 YVTVQPYTSQSK Unmodified 1399.6983 0.69834526 2795 Q5TCZ1 SH3PXD2A SH3 and PX domain-containing protein 2A yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 40.401 40.581 2 2.5948E-05 45354 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 94.309 80.932 105120000 0 0 0 6599300 6407700 6540300 9586300 7010900 6033700 9979500 12003000 9997800 10945000 7027400 12991000 61288 2795 55146 517254;517255;517256;517257;517258;517259;517260;517261;517262;517263;517264;517265;517266 410517;410518;410519;410520;410521;410522;410523;410524;410525;410526;410527 410517 10 YVTVYNLIK Unmodified 1111.6277 0.6277465 1420 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 7 3.87 3 5 1 1 1 1 1 1 1 1 81.044 79.213 2 0.0074429 101138 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 96.19 75.565 109070000 58607000 19635000 4549300 0 0 2638100 0 0 0 4221000 3379900 5281300 0 0 10758000 61289 1420 55147 517267;517268;517269;517270;517271;517272;517273;517274 410528;410529;410530 410530 3 YVVFFFYPLDFTFVCPTEIIAFSDRAEEFK Unmodified 3696.7891 0.7890811 2131 Q06830 PRDX1 Peroxiredoxin-1 yes yes 0 0 1 By MS/MS 2 0 1 1 106.29 101.53 3 0.0027649 125379 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 29.54 27.713 4144200 0 4144200 0 0 0 0 0 0 0 0 0 0 0 0 0 61290 2131 55148 517275 410531 410531 1 YVVGLIIK Unmodified 903.57934 0.57933974 237 O14980 XPO1 Exportin-1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 76.875 76.985 2 0.016585 88726 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 67.035 46.48 52358000 0 0 0 0 2252600 6892900 2948300 2594200 3078600 6442400 3439800 5661600 3956100 5220400 9871400 61291 237 55149 517276;517277;517278;517279;517280;517281;517282;517283;517284;517285;517286 410532;410533;410534;410535;410536;410537;410538;410539;410540;410541 410533 10 YVVLCESPQDK Unmodified 1336.6333 0.63330216 3485 Q8TC07 TBC1D15 TBC1 domain family member 15 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 49.332 44.034 2 0.0060258 54814 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 72.643 63.78 92513000 0 92513000 0 0 0 0 0 0 0 0 0 0 0 0 0 61292 3485 55150 517287;517288;517289 410542;410543;410544 410543 3 YVVPVESSLGK Unmodified 1176.639 0.63903946 204 O14727 APAF1 Apoptotic protease-activating factor 1 yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 67.035 61.724 2 0.0039391 78870 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 98.044 67.407 75777000 0 75777000 0 0 0 0 0 0 0 0 0 0 0 0 0 61293 204 55151 517290;517291 410545;410546 410546 2 YVVQNPEQEPLSQFLR Unmodified 1945.9898 0.98977625 3566 Q8WVV4 POF1B Protein POF1B yes yes 0 0 0 By MS/MS By matching By MS/MS By matching 10 0 6 2 1 2 1 85.888 85.824 2;3 4.2071E-06 99316 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 88.441 76.276 19994000 0 0 0 3816300 1354800 0 0 11782000 0 0 3040800 0 0 0 0 61294 3566 55152 517292;517293;517294;517295;517296;517297 410547;410548;410549 410547 3 YVVREGDNVNYDWIHWDPEHSYEFK Unmodified 3196.4315 0.43151289 2101 Q04446 GBE1 1,4-alpha-glucan-branching enzyme yes yes 0 0 1 By MS/MS 2 0 2 2 90.007 81.876 4;5 1.1033E-05 106469 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 64.68 64.361 21528000 21528000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 61295 2101 55153 517298;517299 410550;410551;410552 410551 2 YVVVTGITPTPLGEGK Unmodified 1629.8978 0.89777334 953 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.44 3.62 4 2 12 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 79.537 78.334 2 2.4094E-07 91153 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 102.66 86.408 2344300000 57527000 1266800000 27709000 43394000 55069000 88088000 93138000 77607000 85501000 97544000 92445000 88698000 58513000 73307000 138950000 61296 953 55154 517300;517301;517302;517303;517304;517305;517306;517307;517308;517309;517310;517311;517312;517313;517314;517315;517316;517317 410553;410554;410555;410556;410557;410558;410559;410560;410561;410562;410563;410564;410565;410566;410567;410568;410569 410568 17 YVWLVYEQDRPLK Unmodified 1707.8984 0.89844205 1269 P30086 PEBP1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide yes yes 0 0 1 By MS/MS 10 0 2 2 78.446 78.692 2;3 0.00046804 90415 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 72.705 68.157 41031000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41031000 61297 1269 55155 517318;517319 410570;410571 410570 2 YVYNYEAESSSGVPGTADSR Unmodified 2150.9393 0.93925682 49 CON__ENSEMBL:ENSBTAP00000032840 yes yes 0 0 0 By matching By matching By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 56.857 56.969 2 0.0010014 64848 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 61.212 55.728 + 20185000 0 0 0 0 3799700 0 0 0 2767400 4984400 0 5540500 0 3092800 0 61298 49 55156 517320;517321;517322;517323;517324 410572;410573 410572 2 YVYQPMEK Unmodified 1056.495 0.49501776 1538 P48444 ARCN1 Coatomer subunit delta yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 6 1 1 1 1 1 1 36.826 36.807 2 0.010849 40537 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 78.324 68.294 90215000 0 0 0 10987000 10660000 0 15969000 0 8883500 21102000 22613000 0 0 0 0 61299 1538 55157 517325;517326;517327;517328;517329;517330 410574;410575;410576;410577 410575 4 YVYQPMEK Oxidation (M) 1072.4899 0.48993238 1538 P48444 ARCN1 Coatomer subunit delta yes yes 0 1 0 By matching By MS/MS By MS/MS By MS/MS By matching 10 0 5 1 1 1 1 1 25.944 25.991 2 0.031415 27608 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 47.743 29.895 31834000 0 0 0 4068000 4999300 0 7295500 0 4648400 0 0 0 0 0 10823000 61300 1538 55157 517331;517332;517333;517334;517335 410578 410578 1 YVYSVLDDVIPEEILGK Unmodified 1951.019 0.019010693 1491 P45985 MAP2K4 Dual specificity mitogen-activated protein kinase kinase 4 yes yes 0 0 0 By MS/MS By MS/MS 2.33 0.471 2 1 1 2 99.596 93.175 2 2.6186E-26 117584 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 124.12 111.56 76587000 43618000 32969000 0 0 0 0 0 0 0 0 0 0 0 0 0 61301 1491 55158 517336;517337;517338 410579;410580;410581 410579 2 YVYVVTELMK Unmodified 1243.6522 0.65224669 1672 P51812 RPS6KA3 Ribosomal protein S6 kinase alpha-3 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 87.312 82.03 2 0.0039271 105180 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 92.062 20.839 26455000 24775000 0 1679300 0 0 0 0 0 0 0 0 0 0 0 0 61302 1672 55159 517339;517340 410582;410583;410584 410583 3 YWDLMNLSEK Unmodified 1297.6013 0.60127375 4263 Q9BZE4 GTPBP4 Nucleolar GTP-binding protein 1 yes yes 0 0 0 By MS/MS 10 0 1 1 83.426 83.616 2 0.03441 96540 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 41.796 31.565 5826900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5826900 61303 4263 55160 517341 410585 410585 1 YWDVPPPGFEHITPMQYK Unmodified 2204.0401 0.040097261 1202 P26368 U2AF2 Splicing factor U2AF 65 kDa subunit yes yes 0 0 0 By MS/MS 2 0 2 2 91.24 83.11 3 0.0014693 107619 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.265 41.685 29300000 29300000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 61304 1202 55161 517342;517343 410586;410587 410587 1 YWEAFLPEAK Unmodified 1252.6128 0.61282471 428;2323 Q13596;O60749 SNX1;SNX2 Sorting nexin-1;Sorting nexin-2 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.67 2.98 2 10 1 1 1 1 1 1 1 1 1 1 1 1 82.93 82.372 2 0.0023779 95213 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 84.213 77.477 320260000 0 172290000 45029000 3255800 4505600 11938000 4417600 7645900 4699600 10857000 10837000 10116000 0 0 34671000 61305 2323;428 55162 517344;517345;517346;517347;517348;517349;517350;517351;517352;517353;517354;517355 410588;410589;410590;410591;410592;410593;410594;410595;410596;410597;410598;410599;410600 410588 13 YWELIYEDSMDLIAK Unmodified 1887.8965 0.89645272 490 O75390 CS Citrate synthase, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 98.775 90.645 2 0.00086016 116940 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 105.17 95.658 17398000 17398000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 61306 490 55163 517356 410601 410601 1 YWELIYEDSMDLIAK Oxidation (M) 1903.8914 0.89136734 490 O75390 CS Citrate synthase, mitochondrial yes yes 0 1 0 By MS/MS 2 0 1 1 96.205 88.074 2 0.0056384 113838 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 57.401 49.002 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 61307 490 55163 517357 410602 410602 636 1 YWGEIPISSSQTNR Unmodified 1636.7845 0.7845345 594 O94864 SUPT7L STAGA complex 65 subunit gamma yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 71.676 71.803 2 0.00046881 82702 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 73.067 57.495 37990000 0 0 0 0 2259100 3776000 2531300 3394900 2579000 3036000 3843600 4769500 2638200 3200100 5962900 61308 594 55164 517358;517359;517360;517361;517362;517363;517364;517365;517366;517367;517368 410603;410604;410605;410606;410607;410608;410609;410610;410611;410612 410604 10 YWGPASPTHK Unmodified 1142.5509 0.55089316 4423 Q9H6S3 EPS8L2 Epidermal growth factor receptor kinase substrate 8-like protein 2 yes yes 0 0 0 By MS/MS 2 0 1 1 38.257 31.696 3 0.0090023 44489 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 83.883 70.763 115420000 115420000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 61309 4423 55165 517369 410613 410613 0 YWGRCEPITSK Unmodified 1395.6605 0.66051996 4923 Q9UIA9 XPO7 Exportin-7 yes yes 0 0 1 By MS/MS 2 0 1 1 44.749 37.884 3 0.029848 51917 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 36.847 21.308 31056000 31056000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 61310 4923 55166 517370 410614 410614 1 YWPDEYALK Unmodified 1183.555 0.55497548 2122 Q06124 PTPN11 Tyrosine-protein phosphatase non-receptor type 11 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 2 6 1 1 1 1 1 1 1 1 71.519 70.658 2 0.031045 88428 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 66.073 54.852 84838000 0 60086000 6126000 0 0 0 2417200 2593100 0 5459700 3594500 0 2547100 2014400 0 61311 2122 55167 517371;517372;517373;517374;517375;517376;517377;517378 410615;410616 410615 2 YWQSNMNNVK Unmodified 1282.5765 0.57645598 4293 Q9C0J8 WDR33 pre-mRNA 3' end processing protein WDR33 yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 43.846 37.84 2 0.0036406 51832 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 93.429 49.079 31577000 15013000 16563000 0 0 0 0 0 0 0 0 0 0 0 0 0 61312 4293 55168 517379;517380 410617;410618 410618 2 YWTLTATGGVQSTASSK Unmodified 1756.8632 0.86317875 2626 Q16658 FSCN1 Fascin yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 9 3 3 3 75.747 70.734 2 3.6804E-54 94207 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 151.78 135.92 121790000 24896000 88382000 8510200 0 0 0 0 0 0 0 0 0 0 0 0 61313 2626 55169 517381;517382;517383;517384;517385;517386;517387;517388;517389 410619;410620;410621;410622;410623;410624;410625;410626;410627;410628;410629 410624 9 YWTSKPEPSTR Unmodified 1350.6568 0.65681479 646 O95361;Q309B1 TRIM16;TRIM16L Tripartite motif-containing protein 16;Tripartite motif-containing protein 16-like protein yes no 0 0 1 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 26.638 26.866 3 0.049479 27590 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 27.431 20.995 50385000 0 0 0 0 1974300 4463500 3223300 6066700 0 6762200 10014000 6181000 0 0 11700000 61314 646 55170 517390;517391;517392;517393;517394;517395;517396;517397 410630 410630 1 YWTVGSDSAVTSSGDTPVDFFFEFCDYNK Unmodified 3340.4183 0.41829017 2626 Q16658 FSCN1 Fascin yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 100.24 94.401 3 6.719E-35 119144 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 97.441 95.318 81751000 81751000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 61315 2626 55171 517398;517399 410631;410632;410633;410634 410633 4 YWVPVEYEEEEK Unmodified 1598.7141 0.7140549 2228 Q13045 FLII Protein flightless-1 homolog yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 74.835 74.994 2 0.0017198 85656 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 78.655 72.052 49017000 0 0 0 0 0 4508600 0 2750100 4344600 5395700 6428400 5903300 5222300 4236300 10227000 61316 2228 55172 517400;517401;517402;517403;517404;517405;517406;517407;517408 410635;410636;410637;410638;410639;410640;410641;410642;410643 410641 9 YYADGEDAYAMK Oxidation (M) 1411.5602 0.56019679 1435 P41227;Q9BSU3 NAA10;NAA11 N-alpha-acetyltransferase 10;N-alpha-acetyltransferase 11 yes no 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 2.65 2 14 1 1 1 1 1 1 1 2 2 3 2 32.717 32.129 2 1.7415E-06 35661 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 112.75 104.92 1381600000 6675900 62071000 0 7527100 14976000 12920000 118700000 91581000 103360000 245130000 290560000 428120000 0 0 0 61317 1435 55173 517409;517410;517411;517412;517413;517414;517415;517416;517417;517418;517419;517420;517421;517422;517423;517424 410644;410645;410646;410647;410648;410649;410650;410651;410652;410653;410654;410655;410656;410657;410658;410659 410646 2257 16 YYADGEDAYAMK Unmodified 1395.5653 0.56528217 1435 P41227;Q9BSU3 NAA10;NAA11 N-alpha-acetyltransferase 10;N-alpha-acetyltransferase 11 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.11 2.51 2 16 1 1 1 1 1 2 2 1 2 2 2 1 1 44.221 43.621 2 5.9817E-08 49438 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 127.4 119.18 2711900000 4299200 278130000 0 8714600 30770000 26477000 155450000 251230000 213860000 320670000 646870000 752530000 0 11398000 11467000 61318 1435 55173 517425;517426;517427;517428;517429;517430;517431;517432;517433;517434;517435;517436;517437;517438;517439;517440;517441;517442 410660;410661;410662;410663;410664;410665;410666;410667;410668;410669;410670;410671;410672;410673;410674;410675;410676;410677;410678;410679;410680;410681 410666 21 YYADGEDAYAMKR Unmodified 1551.6664 0.6663932 1435 P41227;Q9BSU3 NAA10;NAA11 N-alpha-acetyltransferase 10;N-alpha-acetyltransferase 11 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 37.672 37.85 3 0.00049067 41220 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 62.891 54.84 208100000 0 0 0 0 1878500 0 14825000 10355000 7012600 32820000 44503000 96705000 0 0 0 61319 1435 55174 517443;517444;517445;517446;517447;517448;517449 410682;410683;410684;410685;410686 410686 5 YYADGEDAYAMKR Oxidation (M) 1567.6613 0.66130782 1435 P41227;Q9BSU3 NAA10;NAA11 N-alpha-acetyltransferase 10;N-alpha-acetyltransferase 11 yes no 0 1 1 By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 2 2 2 1 28.483 28.678 2;3 1.3974E-21 30667 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 142.83 134.34 410060000 0 0 0 1990600 0 2876000 4639200 3482200 30995000 93943000 196900000 75232000 0 0 0 61320 1435 55174 517450;517451;517452;517453;517454;517455;517456;517457;517458;517459;517460 410687;410688;410689;410690 410690 2257 0 YYAELCAPPGNSDPEQLK Unmodified 2050.9306 0.93060639 3844 Q96G03 PGM2 Phosphoglucomutase-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 6 4 2 2 2 1 1 68.73 67.096 2 2.8063E-07 84705 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 85.522 75.834 116010000 0 104480000 0 0 0 0 0 0 0 0 4474400 0 0 0 7052800 61321 3844 55175 517461;517462;517463;517464 410691;410692;410693 410692 3 YYAEVETR Unmodified 1029.4767 0.47672516 3909 Q96KP1 EXOC2 Exocyst complex component 2 yes yes 0 0 0 By matching By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 10 0 8 1 1 1 1 1 1 1 1 28.091 28.397 2 0.02313 30646 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 60.59 43.204 31546000 0 0 0 0 2297300 0 0 2226500 0 3710800 5112500 4392700 4395200 3669200 5742200 61322 3909 55176 517465;517466;517467;517468;517469;517470;517471;517472 410694;410695;410696;410697 410694 4 YYAFPQMITPLVTK Oxidation (M) 1686.8691 0.86911575 2405 Q14353 GAMT Guanidinoacetate N-methyltransferase yes yes 0 1 0 By MS/MS By MS/MS By MS/MS 10 0 3 1 1 1 84.359 84.497 2 0.0006271 97900 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 62.303 56.062 14113000 0 0 0 0 0 4713700 0 0 0 0 2894300 0 0 0 6505300 61323 2405 55177 517473;517474;517475 410698;410699;410700 410698 3942 3 YYAFPQMITPLVTK Unmodified 1670.8742 0.87420113 2405 Q14353 GAMT Guanidinoacetate N-methyltransferase yes yes 0 0 0 By MS/MS 10 0 1 1 91.772 91.91 2 0.0082616 106512 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 42.001 29.942 1586600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1586600 61324 2405 55177 517476 410701 410701 1 YYAIEVDPVLTVEEK Unmodified 1766.8978 0.89783292 4334 Q9H0P0 NT5C3A Cytosolic 5'-nucleotidase 3A yes yes 0 0 0 By MS/MS By MS/MS 2 0 2 1 1 89.234 85.568 2 0.0017794 106382 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 80.522 57.225 26207000 0 25055000 1152700 0 0 0 0 0 0 0 0 0 0 0 0 61325 4334 55178 517477;517478 410702;410703 410703 2 YYASEIAGQTTSK Unmodified 1417.6725 0.67252444 1486 P45954 ACADSB Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 0 0 0 By MS/MS 2 0 1 1 42.417 37.269 2 0.0018584 48589 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.84 100.55 18189000 0 18189000 0 0 0 0 0 0 0 0 0 0 0 0 0 61326 1486 55179 517479 410704 410704 1 YYASFIEDNELNIVLELADAGDLSR Unmodified 2829.3709 0.37086969 3508 Q8TDX7 NEK7 Serine/threonine-protein kinase Nek7 yes yes 0 0 0 By MS/MS 3 0 1 1 101.71 98.115 3 1.2636E-21 102454 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_3 64.488 62.015 3431200 3431200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 61327 3508 55180 517480 410705 410705 1 YYAVNYPLR Unmodified 1157.5869 0.58694431 2314 Q13547 HDAC1 Histone deacetylase 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 62.782 63.007 2 0.0040669 71281 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 88.029 69.704 34095000 0 0 0 0 0 3845500 4566800 3102900 2866500 0 6022600 0 0 5575000 8115900 61328 2314 55181 517481;517482;517483;517484;517485;517486;517487 410706;410707;410708 410707 3 YYCLNVPLRDGIDDQSYK Unmodified 2218.0365 0.036468446 280 O15379 HDAC3 Histone deacetylase 3 yes yes 0 0 1 By MS/MS 10 0 1 1 77.074 77.339 3 0.0059713 88886 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 32.366 23.657 7170800 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7170800 61329 280 55182 517488 410709 410709 1 YYCQNFAPNFK Unmodified 1450.634 0.63397086 3966 Q96RE7 NACC1 Nucleus accumbens-associated protein 1 yes yes 0 0 0 By MS/MS By matching By matching 10 0 3 1 1 1 64.698 65.081 2 0.016403 74399 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 44.349 25.569 14741000 0 0 0 0 0 0 0 0 0 0 0 6144900 3763000 0 4832900 61330 3966 55183 517489;517490;517491 410710 410710 1 YYDAIACLK Unmodified 1115.5321 0.53213155 123 O00170 AIP AH receptor-interacting protein yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.5 3.01 1 1 8 2 1 1 1 1 1 1 1 1 64.708 63.756 2 0.0051781 72935 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 81.191 70.723 112000000 0 81494000 0 0 0 0 1815600 0 2482500 3887200 4116500 8707400 3673100 0 5823300 61331 123 55184 517492;517493;517494;517495;517496;517497;517498;517499;517500;517501 410711;410712;410713;410714;410715;410716;410717;410718;410719 410717 9 YYDDTYPSVK Unmodified 1249.5503 0.55028404 1861 P61923 COPZ1 Coatomer subunit zeta-1 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.93 3.43 3 1 11 1 2 1 1 1 1 1 1 1 1 1 1 1 1 43.453 42.125 2 0.00039375 53533 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.89 108.5 1412700000 25903000 493900000 3533400 40231000 47969000 55901000 57021000 55144000 42130000 97997000 123120000 127880000 76449000 0 165530000 61332 1861 55185 517502;517503;517504;517505;517506;517507;517508;517509;517510;517511;517512;517513;517514;517515;517516 410720;410721;410722;410723;410724;410725;410726;410727;410728;410729;410730;410731;410732;410733;410734 410725 15 YYDSRPGGYGYGYGR Unmodified 1729.7485 0.74848335 2026 P98179 RBM3 RNA-binding protein 3 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 41.896 42.073 3 0.0024676 46408 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 44.294 39.58 210510000 0 0 0 9265000 7407800 14023000 7125700 10211000 11421000 17363000 21663000 34642000 14689000 17024000 45680000 61333 2026 55186 517517;517518;517519;517520;517521;517522;517523;517524;517525;517526;517527;517528 410735;410736;410737;410738;410739;410740;410741;410742;410743;410744;410745;410746 410744 11 YYEAADTVTQFDNVR Unmodified 1790.8111 0.81114318 3475 Q8TAQ2 SMARCC2 SWI/SNF complex subunit SMARCC2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By matching By matching By matching By MS/MS By MS/MS By MS/MS 10 0 23 2 2 3 2 1 2 2 2 1 2 2 2 70.401 70.457 2;3 3.99E-41 81867 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 158.31 137.44 297470000 0 0 0 13378000 17314000 29701000 24776000 13236000 27029000 30866000 29388000 7436000 21192000 31147000 52004000 61334 3475 55187 517529;517530;517531;517532;517533;517534;517535;517536;517537;517538;517539;517540;517541;517542;517543;517544;517545;517546;517547;517548;517549;517550;517551 410747;410748;410749;410750;410751;410752 410751 5 YYEGYYAAGPGYGGR Unmodified 1642.7052 0.70522155 3706 Q93052 LPP Lipoma-preferred partner yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 54.676 55.308 2 3.3949E-05 61854 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 95.573 86.141 18030000 0 0 0 0 0 0 0 0 0 0 0 4658600 0 0 13372000 61335 3706 55188 517552;517553;517554;517555 410753;410754;410755;410756 410753 4 YYEQDLALAK Unmodified 1212.6027 0.60265396 3745 Q96AY4 TTC28 Tetratricopeptide repeat protein 28 yes yes 0 0 0 By MS/MS 2 0 1 1 59.136 53.293 2 0.018031 68760 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 77.732 63.218 46626000 0 46626000 0 0 0 0 0 0 0 0 0 0 0 0 0 61336 3745 55189 517556 410757 410757 1 YYETVSDVLNSVK Unmodified 1515.7457 0.74568938 2443 Q14746 COG2 Conserved oligomeric Golgi complex subunit 2 yes yes 0 0 0 By MS/MS 2 0 1 1 85.712 80.938 2 0.0005651 100577 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 117.14 107.13 81529000 0 81529000 0 0 0 0 0 0 0 0 0 0 0 0 0 61337 2443 55190 517557 410758 410758 1 YYFEGIK Unmodified 918.44872 0.4487195 661 O95433 AHSA1 Activator of 90 kDa heat shock protein ATPase homolog 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 58.545 58.801 2 0.028147 66546 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_3 76.847 48.74 424210000 0 0 0 0 0 53115000 28359000 28560000 20932000 44371000 49435000 46085000 31444000 37078000 84833000 61338 661 55191 517558;517559;517560;517561;517562;517563;517564;517565;517566;517567 410759;410760;410761;410762 410760 4 YYGGGSEGGR Unmodified 1001.4203 0.42027292 1008 P14866 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 9.2411 9.3751 2 0.0063431 6678 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 65.305 60.949 53741000 0 0 0 2745200 3017400 3830600 4291500 3561800 2886000 3533300 7114800 7055600 4407000 3958500 7339100 61339 1008 55192 517568;517569;517570;517571;517572;517573;517574;517575;517576;517577;517578;517579 410763;410764;410765;410766;410767;410768;410769 410764 7 YYGGGSEGGRAPK Unmodified 1297.6051 0.60511357 1008 P14866 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 22 2 1 2 2 2 2 2 1 2 2 2 2 11.633 11.781 2;3 5.6745E-07 9671 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 94.191 85.781 596750000 0 0 0 25779000 20226000 35076000 44785000 51336000 32498000 59105000 23327000 91909000 45492000 51955000 115260000 61340 1008 55193 517580;517581;517582;517583;517584;517585;517586;517587;517588;517589;517590;517591;517592;517593;517594;517595;517596;517597;517598;517599;517600;517601 410770;410771;410772;410773;410774;410775;410776;410777;410778;410779;410780;410781 410777 11 YYGLQILENVIK Unmodified 1451.8024 0.8024164 237 O14980 XPO1 Exportin-1 yes yes 0 0 0 By MS/MS 2 0 2 2 99.582 94.869 2 0.00026866 117029 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 112.75 91.179 21596000 0 21596000 0 0 0 0 0 0 0 0 0 0 0 0 0 61341 237 55194 517602;517603 410782;410783 410782 1 YYGSYLK Unmodified 892.43307 0.43306943 4811;5279 Q9P289;Q9Y6E0 STK26;STK24 Serine/threonine-protein kinase 26;Serine/threonine-protein kinase 24;Serine/threonine-protein kinase 24 36 kDa subunit;Serine/threonine-protein kinase 24 12 kDa subunit no no 0 0 0 By MS/MS By MS/MS By MS/MS 2 0 3 1 1 1 44.241 38.93 2 0.02866 50973 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 95.793 95.793 1413600000 1105300000 256500000 51828000 0 0 0 0 0 0 0 0 0 0 0 0 61342 4811;5279 55195 517604;517605;517606 410784;410785 410784 2 YYIAASYVK Unmodified 1076.5542 0.5542472 3667 Q92820 GGH Gamma-glutamyl hydrolase yes yes 0 0 0 By MS/MS 10 0 1 1 56.363 56.587 2 0.026079 64546 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 73.665 40.772 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 61343 3667 55196 517607 410786 410786 1 YYIEYMESTRDDSPLYIFDSSYGEHPK Unmodified 3304.4547 0.45467568 2908 Q6NYC1 JMJD6 Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 yes yes 0 0 1 By MS/MS 2 0 1 1 94.776 86.646 4 0.00232 112047 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 32.507 30.092 24429000 24429000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 61344 2908 55197 517608 410787 410787 1 YYKTIDDLK Unmodified 1157.5968 0.5968403 72 CON__P13645;P13645 KRT10 Keratin, type I cytoskeletal 10 yes no 0 0 1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching By matching By MS/MS By matching 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 39.443 39.622 3 0.037632 44759 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 34.755 22.519 + 122560000 0 0 0 13956000 5361200 12186000 6601300 10814000 8555000 9852200 12251000 19300000 13632000 8475300 1580400 61345 72 55198 517609;517610;517611;517612;517613;517614;517615;517616;517617;517618;517619;517620 410788 410788 1 YYLEFEDTEENK Unmodified 1578.6726 0.67258402 5128 Q9Y2Y0 ARL2BP ADP-ribosylation factor-like protein 2-binding protein yes yes 0 0 0 By MS/MS 2 0 1 1 72.949 67.404 2 1.5149E-08 85119 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 151.22 147.9 105220000 0 105220000 0 0 0 0 0 0 0 0 0 0 0 0 0 61346 5128 55199 517621 410789 410789 1 YYLHDDREGEGSDK Unmodified 1682.7172 0.7172428 5122 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 0 0 1 By MS/MS By matching By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 18.753 18.946 3 0.00035384 19073 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_1 67.964 63.792 46983000 0 0 0 0 1916700 5318300 2822400 3742000 4373100 0 5635300 9449700 8845400 4880500 0 61347 5122 55200 517622;517623;517624;517625;517626;517627;517628;517629;517630 410790;410791;410792;410793;410794 410793 4 YYLNGVDALR Unmodified 1182.6033 0.60332266 2448 Q147X3 NAA30 N-alpha-acetyltransferase 30 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS 10 0 4 1 1 1 1 69.096 69.179 2 0.0017794 79377 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 101.64 91.176 32543000 0 0 0 0 1588300 0 0 0 0 8443200 8816200 13695000 0 0 0 61348 2448 55201 517631;517632;517633;517634 410795;410796;410797;410798 410795 4 YYMNQVEETR Unmodified 1331.5816 0.58160094 1704 P52888 THOP1 Thimet oligopeptidase yes yes 0 0 0 By MS/MS 10 0 1 1 39.1 39.841 2 0.0079006 43244 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 71.451 65.669 6390100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6390100 61349 1704 55202 517635 410799 410799 1 YYNDYGDIIK Unmodified 1262.5819 0.58191851 3326;3563 Q8N3U4;Q8WVM7 STAG2;STAG1 Cohesin subunit SA-2;Cohesin subunit SA-1 no no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.79 3.51 3 1 10 1 2 1 1 1 1 1 1 1 1 1 1 1 63.841 62.28 2 0.0020595 70835 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 86.67 71.997 229570000 7659700 150770000 3039900 4442300 3183500 7884500 4511300 4198200 0 8244900 9199000 7826100 0 8369100 10241000 61350 3326;3563 55203 517636;517637;517638;517639;517640;517641;517642;517643;517644;517645;517646;517647;517648;517649 410800;410801;410802;410803;410804;410805;410806;410807;410808;410809;410810 410804 9 YYNSDVHR Unmodified 1052.4676 0.46755746 1093 P19623 SRM Spermidine synthase yes yes 0 0 0 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By matching By MS/MS 10 0 8 1 1 1 1 1 1 1 1 11.394 11.561 2 0.0056479 9691 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 128.57 100.46 24065000 0 0 0 0 643370 0 945970 1192100 0 1333800 0 2913700 2307700 3849000 10879000 61351 1093 55204 517650;517651;517652;517653;517654;517655;517656;517657 410811;410812;410813 410811 3 YYPPDFDPSK Unmodified 1227.5448 0.54480473 4205 Q9BW85 CCDC94 Coiled-coil domain-containing protein 94 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.93 2.63 1 1 12 2 1 1 1 1 1 1 1 1 1 1 1 1 57.203 56.545 2 0.0036931 70912 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 93.178 77.797 266230000 0 147700000 0 5872000 5834000 6582600 6834300 10810000 7403500 13159000 15627000 11697000 11005000 9331700 14373000 61352 4205 55205 517658;517659;517660;517661;517662;517663;517664;517665;517666;517667;517668;517669;517670;517671 410814;410815;410816;410817;410818;410819;410820;410821;410822 410815 7 YYPTAEEVYGPEVETIVQEEDTQPLTEPIIK Unmodified 3579.7396 0.73960753 2481 Q15029 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes yes 0 0 0 By MS/MS By MS/MS By MS/MS 2.25 0.433 3 1 1 2 1 96.937 92.273 3 6.0224E-135 114688 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 152.88 147.93 233480000 18275000 211800000 3403500 0 0 0 0 0 0 0 0 0 0 0 0 61353 2481 55206 517672;517673;517674;517675 410823;410824;410825;410826;410827;410828 410824 6 YYPTEDVPR Unmodified 1138.5295 0.52948901 2083 Q02878 RPL6 60S ribosomal protein L6 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 42.797 42.985 2 0.0034222 47879 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 94.114 81.758 135660000 0 0 0 6611500 7386600 0 8719900 7346700 5877700 7516800 13926000 30778000 16133000 12699000 18664000 61354 2083 55207 517676;517677;517678;517679;517680;517681;517682;517683;517684;517685;517686 410829;410830;410831;410832;410833;410834;410835;410836;410837;410838;410839 410833 11 YYPTEDVPRK Unmodified 1266.6245 0.62445203 2083 Q02878 RPL6 60S ribosomal protein L6 yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 14 1 1 1 1 1 1 1 2 1 1 2 1 31.595 31.811 3 0.0017246 33866 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 69.276 59.451 1243200000 0 0 0 47760000 86616000 97099000 58189000 72220000 62877000 99920000 214100000 159850000 131160000 88108000 125340000 61355 2083 55208 517687;517688;517689;517690;517691;517692;517693;517694;517695;517696;517697;517698;517699;517700 410840;410841;410842;410843;410844;410845;410846;410847;410848;410849 410847 8 YYQDCSGGDRK Unmodified 1347.5514 0.55136344 3038 Q7KZ85 SUPT6H Transcription elongation factor SPT6 yes yes 0 0 1 By MS/MS 2.5 0.5 2 2 4 8.025 4.722 2;3 0.012766 6584 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_3 45.653 45.653 30300000 0 30300000 0 0 0 0 0 0 0 0 0 0 0 0 0 61356 3038 55209 517701;517702;517703;517704 410850;410851;410852 410852 2 YYQTIGNHASYYK Unmodified 1606.7416 0.74160705 5036 Q9UNM6 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 6 18 2 2 2 1 1 2 1 1 2 2 2 2 1 1 2 40.874 39.65 2;3 6.2701E-05 44325 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_1 77.185 64.389 1809500000 976030000 82569000 107600000 37484000 5442900 74573000 2934700 16374000 17573000 117600000 110800000 150940000 20454000 3913400 85218000 61357 5036 55210 517705;517706;517707;517708;517709;517710;517711;517712;517713;517714;517715;517716;517717;517718;517719;517720;517721;517722;517723;517724;517725;517726;517727;517728 410853;410854;410855;410856;410857;410858;410859;410860;410861;410862;410863;410864;410865;410866;410867;410868;410869 410868 17 YYRPTEVDFLQGDCTK Unmodified 1990.9095 0.90947702 411 O60547 GMDS GDP-mannose 4,6 dehydratase yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.47 3.59 3 2 10 2 2 1 1 1 1 1 1 1 1 1 1 1 71.839 70.402 3 1.2556E-18 86931 211201_C21_010_OE480_Thermo_Rev00_#21_059_i3_3 123.02 111.12 302100000 125970000 80068000 18238000 0 0 7714100 5232900 6617800 8809600 7887500 9899100 6896400 3660800 4625900 16487000 61358 411 55211 517729;517730;517731;517732;517733;517734;517735;517736;517737;517738;517739;517740;517741;517742;517743 410870;410871;410872;410873;410874;410875;410876;410877;410878;410879;410880;410881;410882;410883;410884;410885;410886 410882 16 YYSDLFSYCDIESTK Unmodified 1889.8029 0.80294626 3791 Q96D71 REPS1 RalBP1-associated Eps domain-containing protein 1 yes yes 0 0 0 By MS/MS 2 0 1 1 85.813 81.038 2 0.00054774 100773 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 101.72 93.232 18075000 0 18075000 0 0 0 0 0 0 0 0 0 0 0 0 0 61359 3791 55212 517744 410887 410887 1 YYSEEAEVDLRDPGRDYELYK Unmodified 2609.1922 0.19217704 2343 Q13769 THOC5 THO complex subunit 5 homolog yes yes 0 0 2 By MS/MS 2 0 1 1 77.674 69.543 3 0.004523 91558 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 51.348 39.22 11404000 11404000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 61360 2343 55213 517745 410888 410888 1 YYSFFDLNPK Unmodified 1292.6077 0.60773933 3735;4100 Q96AC1;Q9BQL6 FERMT2;FERMT1 Fermitin family homolog 2;Fermitin family homolog 1 no no 0 0 0 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.29 3.28 3 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85.783 84.751 2 7.9923E-05 107202 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 122.52 113.6 518920000 269530000 114950000 20923000 3432300 0 17518000 3863500 8480700 5557000 11747000 9154200 7724000 7658700 8541200 29835000 61361 3735;4100 55214 517746;517747;517748;517749;517750;517751;517752;517753;517754;517755;517756;517757;517758;517759 410889;410890;410891;410892;410893;410894;410895;410896;410897;410898;410899;410900;410901;410902 410894 14 YYSIASSSK Unmodified 1004.4815 0.48147619 1039 P16435 POR NADPH--cytochrome P450 reductase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 27.656 27.766 2 0.004955 29567 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 85.161 75.69 140580000 0 0 0 9815300 15024000 0 17273000 16825000 9453700 20988000 18585000 0 18455000 14159000 0 61362 1039 55215 517760;517761;517762;517763;517764;517765;517766;517767;517768;517769;517770 410903;410904;410905;410906;410907;410908;410909;410910;410911;410912;410913;410914;410915 410909 13 YYSYGLEK Unmodified 1021.4757 0.47566253 2961 Q6PKG0 LARP1 La-related protein 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 9 1 1 1 1 1 1 1 1 1 41.843 41.906 2 0.018652 46128 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 64.265 37.01 52202000 0 0 0 2948400 4228800 6709700 4735600 5751200 5549800 6528500 0 9365700 0 6384500 0 61363 2961 55216 517771;517772;517773;517774;517775;517776;517777;517778;517779 410916;410917;410918;410919;410920;410921;410922 410922 7 YYTEFPTVLDITAEDPSK Unmodified 2087.9939 0.99391815 228 O14929 HAT1 Histone acetyltransferase type B catalytic subunit yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 90.426 90.534 2 5.7108E-47 105097 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 152.74 147.08 94286000 0 0 0 0 2764500 7110900 2469100 5221700 3011600 14555000 14484000 9340800 2362000 6691500 26274000 61364 228 55217 517780;517781;517782;517783;517784;517785;517786;517787;517788;517789;517790 410923;410924;410925;410926;410927;410928;410929;410930;410931;410932;410933;410934 410924 12 YYTGNYDQYVK Unmodified 1412.6248 0.62484596 4879 Q9UG63 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 0 0 0 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8.4 3.2 3 12 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54.169 53.085 2 5.0218E-06 59582 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_2 141.88 122.09 1005000000 9434700 449650000 4183000 39935000 42177000 29501000 54638000 52171000 40100000 52729000 52206000 56747000 41083000 37185000 43207000 61365 4879 55218 517791;517792;517793;517794;517795;517796;517797;517798;517799;517800;517801;517802;517803;517804;517805 410935;410936;410937;410938;410939;410940;410941;410942;410943;410944;410945;410946;410947;410948 410944 13 YYTGVVNNNEMVALQR Oxidation (M) 1885.8992 0.89924668 2411 Q14527 HLTF Helicase-like transcription factor yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 60.27 60.375 2 6.2743E-28 68660 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_3 134.98 119.78 123210000 0 0 0 4763300 8568400 8671600 8885600 6019700 8827700 16613000 13836000 14699000 9509400 10375000 12443000 61366 2411 55219 517806;517807;517808;517809;517810;517811;517812;517813;517814;517815;517816;517817 410949;410950;410951;410952;410953;410954;410955;410956;410957;410958;410959;410960;410961 410959 3965 12 YYTGVVNNNEMVALQR Unmodified 1869.9043 0.90433206 2411 Q14527 HLTF Helicase-like transcription factor yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 10 0 18 1 1 1 1 2 1 2 2 2 1 2 2 72.568 72.692 2;3 1.1579E-43 83683 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 199.43 182.49 220480000 0 0 0 5444100 9176000 12278000 6068100 16024000 6696800 30593000 22313000 43106000 8976000 27655000 32149000 61367 2411 55219 517818;517819;517820;517821;517822;517823;517824;517825;517826;517827;517828;517829;517830;517831;517832;517833;517834;517835 410962;410963;410964;410965;410966;410967;410968;410969;410970;410971;410972;410973;410974;410975 410963 14 YYTGVVNNNEMVALQRDPNNPYDK Unmodified 2813.3079 0.30789228 2411 Q14527 HLTF Helicase-like transcription factor yes yes 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 5 1 1 1 1 1 73.473 73.723 3 4.3428E-94 84481 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 151.21 143.34 69676000 0 0 0 0 0 0 0 0 0 12917000 12342000 13940000 0 0 30477000 61368 2411 55220 517836;517837;517838;517839;517840 410976;410977;410978;410979;410980;410981 410977 6 YYTGVVNNNEMVALQRDPNNPYDK Oxidation (M) 2829.3028 0.3028069 2411 Q14527 HLTF Helicase-like transcription factor yes yes 0 1 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 7 1 1 1 1 1 1 1 63.217 63.388 3 1.8875E-22 71797 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 90.475 78.509 146070000 0 0 0 7482500 0 0 0 14081000 15436000 0 31431000 38530000 14778000 0 24334000 61369 2411 55220 517841;517842;517843;517844;517845;517846;517847 410982;410983;410984;410985;410986;410987;410988;410989;410990;410991;410992;410993 410983 3965 12 YYTLFGR Unmodified 918.45995 0.45995289 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 66.922 67.006 2 0.01787 76498 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_2 113.08 97.862 492590000 0 0 0 16894000 14246000 44380000 27239000 24316000 25214000 43884000 46149000 61378000 33867000 39787000 115230000 61370 848 55221 517848;517849;517850;517851;517852;517853;517854;517855;517856;517857;517858;517859 410994;410995;410996;410997;410998;410999;411000;411001;411002;411003 410997 10 YYTLFGRSY Unmodified 1168.5553 0.55530983 848 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 1 By MS/MS 2 0 1 1 83.567 75.436 2 0.044523 98541 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 94.302 77.062 53172000 53172000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 61371 848 55222 517860 411004 411004 1 YYTLNGSK Unmodified 944.46035 0.46034682 1591 P49748 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 0 0 0 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 12 1 1 1 1 1 1 1 1 1 1 1 1 27.633 27.83 2 0.019937 30070 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 63.21 51.017 136370000 0 0 0 10398000 7373000 8175800 7797100 12302000 4527800 12465000 18046000 19687000 11089000 8822000 15688000 61372 1591 55223 517861;517862;517863;517864;517865;517866;517867;517868;517869;517870;517871;517872 411005;411006;411007;411008;411009 411005 5 YYTPTISR Unmodified 999.50255 0.50254598 1589 P49721 PSMB2 Proteasome subunit beta type-2 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 43.839 43.953 2 0.004651 48041 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 109.86 35.527 187290000 0 0 0 18969000 6489600 6982100 6544100 13522000 0 0 28623000 0 7287400 15940000 82933000 61373 1589 55224 517873;517874;517875;517876;517877;517878;517879;517880;517881;517882 411010;411011;411012;411013;411014;411015;411016;411017;411018 411012 9 YYTPVPCESATAK Unmodified 1485.681 0.68098063 1669 P51692 STAT5B Signal transducer and activator of transcription 5B yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.2 2.4 1 9 1 1 1 1 1 1 1 1 1 1 47.769 47.416 2 9.6178E-06 59708 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 110.39 104.43 141120000 0 92180000 0 0 2687100 5244100 3174600 0 0 4486400 5498000 6672100 6719900 5947000 8508400 61374 1669 55225 517883;517884;517885;517886;517887;517888;517889;517890;517891;517892 411019;411020;411021;411022;411023;411024 411021 5 YYTSASGDEMVSLK Oxidation (M) 1565.6919 0.69193925 850 P07900 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 0 1 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 3.46 9 27 2 5 2 2 4 1 1 3 3 3 2 2 4 2 47.143 46.648 2 1.958E-23 58092 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 127.83 111.63 986300000 8041000 257370000 3008800 0 29904000 106680000 2532200 20846000 39158000 94690000 115650000 71509000 72655000 86007000 78256000 61375 850 55226 517893;517894;517895;517896;517897;517898;517899;517900;517901;517902;517903;517904;517905;517906;517907;517908;517909;517910;517911;517912;517913;517914;517915;517916;517917;517918;517919;517920;517921;517922;517923;517924;517925;517926;517927;517928 411025;411026;411027;411028;411029;411030;411031;411032;411033;411034;411035;411036;411037;411038;411039;411040;411041;411042;411043;411044;411045;411046;411047;411048;411049;411050;411051;411052;411053;411054;411055;411056;411057 411034 1074 32 YYTSASGDEMVSLK Unmodified 1549.697 0.69702463 850 P07900 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7.89 3.52 5 14 1 3 1 1 1 2 1 1 1 1 1 2 1 1 1 60.311 58.984 2 1.5618E-20 67157 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 143.79 133.64 1563200000 14224000 702320000 6155000 12622000 15327000 53764000 22120000 32202000 23672000 69901000 109570000 82114000 36777000 80250000 302190000 61376 850 55226 517929;517930;517931;517932;517933;517934;517935;517936;517937;517938;517939;517940;517941;517942;517943;517944;517945;517946;517947 411058;411059;411060;411061;411062;411063;411064;411065;411066;411067;411068;411069;411070;411071;411072;411073;411074;411075;411076;411077;411078;411079;411080;411081;411082;411083;411084;411085;411086;411087;411088;411089;411090;411091;411092;411093 411070 35 YYTVFDRDNNR Unmodified 1461.6637 0.66369108 839 P07339 CTSD Cathepsin D;Cathepsin D light chain;Cathepsin D heavy chain yes yes 0 0 1 By matching By matching By matching By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 10 0 10 1 1 1 1 1 1 1 1 1 1 43.748 43.906 3 0.0040522 48003 211201_C21_010_OE480_Thermo_Rev00_#21_059_P142_3 56.359 41.157 213270000 0 0 0 103060000 7484400 16911000 0 17219000 6821600 16135000 0 12222000 13687000 8502900 11225000 61377 839 55227 517948;517949;517950;517951;517952;517953;517954;517955;517956;517957 411094;411095;411096;411097;411098 411094 5 YYVLNALK Unmodified 982.54877 0.54876789 2930 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 7.71 3.56 4 1 12 3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71.323 69.73 2 0.011473 79548 211201_C21_010_OE480_Thermo_Rev00_#21_059_P141_1 76.847 58.468 430010000 150030000 63123000 15594000 7226000 8731000 16278000 10298000 13741000 11559000 16392000 18818000 28702000 18536000 18902000 32079000 61378 2930 55228 517958;517959;517960;517961;517962;517963;517964;517965;517966;517967;517968;517969;517970;517971;517972;517973;517974 411099;411100;411101;411102;411103;411104;411105;411106 411099 8 YYVQLEQLK Unmodified 1182.6285 0.62847478 386 O60239 SH3BP5 SH3 domain-binding protein 5 yes yes 0 0 0 By MS/MS By MS/MS 6 4 1 1 1 1 75.018 70.077 2 0.024313 87760 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 81.296 46.489 14964000 0 14964000 0 0 0 0 0 0 0 0 0 0 0 0 0 61379 386 55229 517975;517976 411107;411108 411108 2 YYVSPSDLLDDK Unmodified 1413.6664 0.66637643 2558 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.38 2.13 1 12 1 1 1 1 1 1 1 1 1 1 1 1 1 77.841 77.533 2 3.1119E-14 94769 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 136.52 125.36 216230000 0 103430000 0 5772000 4475400 6891300 7380100 9538100 5217300 11747000 10094000 14644000 8928700 10824000 17289000 61380 2558 55230 517977;517978;517979;517980;517981;517982;517983;517984;517985;517986;517987;517988;517989 411109;411110;411111;411112;411113;411114;411115;411116;411117;411118;411119;411120;411121;411122 411113 14 YYVTIIDAPGHR Unmodified 1403.7197 0.7197494 1960 P68104;Q5VTE0 EEF1A1;EEF1A1P5 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3 yes no 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.17 2.44 3 26 1 1 1 2 2 2 2 2 2 2 3 2 2 2 3 63.983 64.089 2;3 6.3883E-12 73255 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_2 144.77 134.82 16223000000 3595800 1824700 744750 662650000 626410000 1779200000 1015400000 1141400000 998490000 1429200000 1158400000 2032600000 1443700000 1339300000 2590400000 61381 1960 55231 517990;517991;517992;517993;517994;517995;517996;517997;517998;517999;518000;518001;518002;518003;518004;518005;518006;518007;518008;518009;518010;518011;518012;518013;518014;518015;518016;518017;518018 411123;411124;411125;411126;411127;411128;411129;411130;411131;411132;411133;411134;411135;411136;411137;411138;411139;411140;411141;411142;411143;411144;411145;411146;411147;411148;411149;411150;411151;411152;411153;411154;411155;411156;411157;411158;411159;411160;411161;411162;411163;411164;411165;411166;411167;411168;411169;411170;411171;411172;411173;411174;411175;411176;411177;411178;411179;411180;411181;411182;411183;411184;411185;411186;411187;411188 411166 60 YYVTIIDAPGHRDFIK Unmodified 1906.9941 0.99413335 1960 P68104;Q5VTE0 EEF1A1;EEF1A1P5 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3 yes no 0 0 1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9.58 1.8 1 1 36 1 1 3 1 5 3 6 3 3 1 1 1 4 5 77.187 77.325 2;3;4 1.1827E-20 87015 211201_C21_010_OE480_Thermo_Rev00_#21_059_P11_3 113.72 102.08 1181300000 14077000 15627000 0 9283400 2493700 91448000 15135000 111620000 66795000 32803000 13198000 31051000 19088000 28873000 729780000 61382 1960 55232 518019;518020;518021;518022;518023;518024;518025;518026;518027;518028;518029;518030;518031;518032;518033;518034;518035;518036;518037;518038;518039;518040;518041;518042;518043;518044;518045;518046;518047;518048;518049;518050;518051;518052;518053;518054;518055;518056 411189;411190;411191;411192;411193;411194;411195;411196;411197;411198;411199;411200;411201;411202;411203;411204;411205;411206;411207;411208;411209;411210;411211;411212;411213;411214;411215;411216;411217;411218;411219;411220;411221;411222 411190 30 YYYNCRTEVSQWEK Unmodified 1924.8414 0.84139745 4138 Q9BTA9 WAC WW domain-containing adapter protein with coiled-coil yes yes 0 0 1 By MS/MS 2 0 1 1 62.328 54.072 3 0.0024319 73085 211201_C21_010_OE480_Thermo_Rev00_#21_059_i1_2 47.037 38.24 14833000 14833000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 61383 4138 55233 518057 411223 411223 1 YYYQLNSK Unmodified 1077.5131 0.51311067 134 O00257 CBX4 E3 SUMO-protein ligase CBX4 yes yes 0 0 0 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 10 0 11 1 1 1 1 1 1 1 1 1 1 1 40.352 40.48 2 0.0043249 44993 211201_C21_010_OE480_Thermo_Rev00_#21_059_P12_1 111.82 86.922 58279000 0 0 0 3357900 3598700 3444500 4289200 4113100 4697500 5926300 6193400 5103600 8661800 8892800 0 61384 134 55234 518058;518059;518060;518061;518062;518063;518064;518065;518066;518067;518068 411224;411225;411226;411227;411228;411229;411230;411231;411232;411233 411226 10 YYYVPADFVEYEK Unmodified 1684.7661 0.76609047 3711 Q93100 PHKB Phosphorylase b kinase regulatory subunit beta yes yes 0 0 0 By MS/MS 2.5 0.5 1 1 2 86.622 82.607 2 0.010958 102790 211201_C21_010_OE480_Thermo_Rev00_#21_059_i2_2 58.592 48.36 52022000 0 52022000 0 0 0 0 0 0 0 0 0 0 0 0 0 61385 3711 55235 518069;518070 411234 411234 1